"library","target","barcode","variant_call_support","avgcount","log10Ka","delta_log10Ka","log10SE","response","baseline","nMSR","variant_class","aa_substitutions","n_aa_substitutions"
"lib1","SARS-CoV-2","AAAAAAAAAATTGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L K199Y",2
"lib1","SARS-CoV-2","AAAAAAAAACTTAAAT",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S L60P K94N S147T C150Y",5
"lib1","SARS-CoV-2","AAAAAAAAACTTCAAT",5,74.5,8.72,-2.05,0.12,1.64,1.13,0.01,">1 nonsynonymous","A22C R127G E141D L188V",4
"lib1","SARS-CoV-2","AAAAAAAACAAGCAGA",6,146.32,10.35,-0.42,0.05,2.87,1.01,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","AAAAAAAACAATATAA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K T15W K94Y V103W",4
"lib1","SARS-CoV-2","AAAAAAAACAGGTTGC",4,47.48,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V71K P149L N157T",3
"lib1","SARS-CoV-2","AAAAAAAACATTAAAT",6,47.44,10.15,-0.61,0.09,2.64,1.09,0,">1 nonsynonymous","A18V T148S H189Y",3
"lib1","SARS-CoV-2","AAAAAAAACCCATCGT",3,1.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184H",1
"lib1","SARS-CoV-2","AAAAAAAACCTTACAA",2,18.78,9.61,-1.15,0.19,2,1.11,0.01,">1 nonsynonymous","T63D A89N",2
"lib1","SARS-CoV-2","AAAAAAAACGACAATA",1,2.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G196Y",1
"lib1","SARS-CoV-2","AAAAAAAACGCCACGT",15,135.57,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P82S P96L T148D F160R",4
"lib1","SARS-CoV-2","AAAAAAAAGAGGAGCT",1,17.96,8.57,-2.19,0.27,1.5,1.26,0.03,">1 nonsynonymous","K48G L60S",2
"lib1","SARS-CoV-2","AAAAAAAAGCCACACA",3,28.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16C R27G K94D F99W N107M",5
"lib1","SARS-CoV-2","AAAAAAAAGGACGGAA",9,177.75,10.72,-0.04,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAAAGGCAAGAA",3,1.93,NA,NA,NA,NA,NA,NA,"stop","E10T C31T C49L N58W V115* F126T T201C",7
"lib1","SARS-CoV-2","AAAAAAAAGGGTATTG",3,45.23,10.03,-0.74,0.09,2.15,1.06,0,">1 nonsynonymous","P7L D90F",2
"lib1","SARS-CoV-2","AAAAAAAAGTTATGTT",4,67.11,10.67,-0.09,0.09,2.89,1.06,0,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","AAAAAAAAGTTTGAAG",3,26.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R16K Y123M R179L",3
"lib1","SARS-CoV-2","AAAAAAAATAATAATG",5,61.37,9.85,-0.92,0.08,1.96,1.05,0,">1 nonsynonymous","I104Y V181L",2
"lib1","SARS-CoV-2","AAAAAAAATCTGACAC",3,11.29,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I2S G9R L60R D68K T85A I88K W106R",7
"lib1","SARS-CoV-2","AAAAAAAATCTGAGAC",4,149.24,8.65,-2.12,0.09,2.79,1.05,0,">1 nonsynonymous","Q84S Y119D Y178I",3
"lib1","SARS-CoV-2","AAAAAAAATTGACAAA",4,20.9,10.76,0,0.13,2.91,1,0.01,">1 nonsynonymous","S41F Q84R T201N",3
"lib1","SARS-CoV-2","AAAAAAAATTGCCTTC",3,42.03,10.16,-0.61,0.08,2.76,1.1,0,">1 nonsynonymous","N30K V115H Q168S",3
"lib1","SARS-CoV-2","AAAAAAACAACGCAGG",6,1.38,NA,NA,NA,NA,NA,NA,"stop","A14S Y50N L60S K94* D98N T140M",6
"lib1","SARS-CoV-2","AAAAAAACAAGATATG",1,8.36,8.48,-2.28,0.39,1.5,1.21,0.06,">1 nonsynonymous","N64I T100N P133I",3
"lib1","SARS-CoV-2","AAAAAAACAATAAAGA",5,97.69,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K94W N109P R179Y",3
"lib1","SARS-CoV-2","AAAAAAACAGAGTAAA",2,5.35,7.62,-3.14,0.41,1.6,1.22,0.05,">1 nonsynonymous","T3N F44K K56L T85M A190I",5
"lib1","SARS-CoV-2","AAAAAAACATTTAAGT",2,28.09,8.77,-1.99,0.37,1.5,1.03,0.07,">1 nonsynonymous","D34V S45V R78F P133S",4
"lib1","SARS-CoV-2","AAAAAAACCATAAACC",4,7.46,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","E10G F17C C61L K87I D97Y P161V",6
"lib1","SARS-CoV-2","AAAAAAACCTTACAAA",3,139.62,10.72,-0.05,0.05,2.9,1.03,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","AAAAAAACCTTCATAG",4,19.72,8.25,-2.52,0.16,1.8,1.14,0.01,">1 nonsynonymous","T3W G9E R127C S129R",4
"lib1","SARS-CoV-2","AAAAAAACGAAACCGA",17,145.67,9,-1.76,0.06,2.83,1.1,0,">1 nonsynonymous","G117E N151F S200V",3
"lib1","SARS-CoV-2","AAAAAAACGACATATA",2,28.98,10.57,-0.2,0.07,2.95,1,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","AAAAAAACGAGTCTAG",1,9.4,9.36,-1.41,0.2,2.03,1.19,0.02,">1 nonsynonymous","A14T F44S P149V T201M",4
"lib1","SARS-CoV-2","AAAAAAACGATTGAGG",3,153.23,10.69,-0.07,0.06,2.85,1.08,0,"1 nonsynonymous","L5C",1
"lib1","SARS-CoV-2","AAAAAAACGCCATCGA",10,228.92,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K26W S113A C158R G166L",4
"lib1","SARS-CoV-2","AAAAAAACGCGACACA",2,34.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44P F62C D90G W106V",4
"lib1","SARS-CoV-2","AAAAAAACGCTCCGGA",10,144.05,10.74,-0.03,0.06,2.88,1.06,0,"1 nonsynonymous","P149V",1
"lib1","SARS-CoV-2","AAAAAAACGTCAGTTA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","L5F N24A G116* S139F C150H",5
"lib1","SARS-CoV-2","AAAAAAACTAGATGAC",5,34.33,9.75,-1.01,0.14,1.97,1.07,0.01,">1 nonsynonymous","N24F N118A",2
"lib1","SARS-CoV-2","AAAAAAACTATACAAG",3,13.69,9.05,-1.71,0.33,1.61,1.33,0.05,"1 nonsynonymous","N13P",1
"lib1","SARS-CoV-2","AAAAAAACTGCCACAA",14,47.55,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13L A22V C49L Y143T",4
"lib1","SARS-CoV-2","AAAAAAAGAAAGTGAA",10,181.3,10.65,-0.12,0.04,2.95,1.02,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","AAAAAAAGAAGAAATT",6,3.12,NA,NA,NA,NA,NA,NA,"stop","S36K K87* E141*",3
"lib1","SARS-CoV-2","AAAAAAAGACGTCATA",1,23.92,10.1,-0.66,0.08,2.93,1,0,"1 nonsynonymous","R73T",1
"lib1","SARS-CoV-2","AAAAAAAGACTGCCTA",1,67.16,9.83,-0.94,0.1,2.24,1.06,0,">1 nonsynonymous","K48F L131M",2
"lib1","SARS-CoV-2","AAAAAAAGATATTGAA",5,33.2,8.31,-2.45,0.16,2.49,1.17,0.01,">1 nonsynonymous","Y119L G174V P197T",3
"lib1","SARS-CoV-2","AAAAAAAGATCAGCCT",1,77.65,8.13,-2.63,0.15,2.5,1.09,0.01,">1 nonsynonymous","D59E G116R Y175C",3
"lib1","SARS-CoV-2","AAAAAAAGATGTATTG",7,104.91,9.29,-1.47,0.13,1.83,1.1,0.01,">1 nonsynonymous","Y121H R136F",2
"lib1","SARS-CoV-2","AAAAAAAGATTACTAC",5,99.14,10.73,-0.04,0.05,2.9,1.08,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","AAAAAAAGCAACAATA",1,39.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10D R25F N130L G146I",4
"lib1","SARS-CoV-2","AAAAAAAGCTGAAAAT",1,7.14,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S19T W106N T201S",3
"lib1","SARS-CoV-2","AAAAAAAGGAAACGCC",4,0.76,NA,NA,NA,NA,NA,NA,"stop","T3F A42* Y178K",3
"lib1","SARS-CoV-2","AAAAAAAGGCAAGATA",4,54.88,10.18,-0.58,0.05,2.83,1,0,">1 nonsynonymous","C6T T15N V37L",3
"lib1","SARS-CoV-2","AAAAAAAGTATTAGCG",3,1.18,NA,NA,NA,NA,NA,NA,"stop","F8T T63L A89K D112* E154P R179C",6
"lib1","SARS-CoV-2","AAAAAAAGTGAAATCC",1,7.35,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V11Q I28L K56S F62R Q168R G174T C195A",7
"lib1","SARS-CoV-2","AAAAAAATAACAAAGA",2,39.84,10.83,0.06,0.14,2.86,1.07,0.01,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","AAAAAAATAATATACC",9,76.16,10.76,-0.01,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAATACACTCAT",1,10.09,8.79,-1.97,0.19,2.71,1.12,0.02,">1 nonsynonymous","L5H Y121T T148A",3
"lib1","SARS-CoV-2","AAAAAAATACCCACTG",2,132.01,10.73,-0.04,0.06,2.9,1.05,0,">1 nonsynonymous","N4M P54I",2
"lib1","SARS-CoV-2","AAAAAAATAGATCATA",3,9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49R L60H D97K",3
"lib1","SARS-CoV-2","AAAAAAATATATGAAT",7,72.86,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","G9L N13L T100P D112E F167L",5
"lib1","SARS-CoV-2","AAAAAAATCAAAATGG",4,17.14,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","AAAAAAATCATATATG",4,31.73,6,-4.76,2,3,1.1,0,">1 nonsynonymous","G51C W106V G116R",3
"lib1","SARS-CoV-2","AAAAAAATCCACTGAA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K K132R",2
"lib1","SARS-CoV-2","AAAAAAATCCGGAGCA",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7W G101R",2
"lib1","SARS-CoV-2","AAAAAAATCGGGTCGG",5,69.75,10.67,-0.1,0.04,2.92,1.04,0,"1 nonsynonymous","I28Y",1
"lib1","SARS-CoV-2","AAAAAAATCTATCCTT",2,71.96,8.58,-2.19,0.16,1.69,1.11,0.01,">1 nonsynonymous","L5N N58M N107L V173L Y178F",5
"lib1","SARS-CoV-2","AAAAAAATGACGAAAC",7,143.7,8.83,-1.93,0.08,2.44,1.11,0,">1 nonsynonymous","K87E W106Y",2
"lib1","SARS-CoV-2","AAAAAAATGAGAATAC",1,1.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134H",1
"lib1","SARS-CoV-2","AAAAAAATGGATGCCA",1,1.2,NA,NA,NA,NA,NA,NA,"stop","A33S C61P I80N I142* N151T",5
"lib1","SARS-CoV-2","AAAAAAATTATATTGC",5,28.01,9.24,-1.52,0.33,1.5,1,0.05,">1 nonsynonymous","N64L P133L",2
"lib1","SARS-CoV-2","AAAAAAATTTGACACA",4,40.2,10.77,0,0.08,2.94,1.05,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","AAAAAAATTTGATAAA",1,17.55,9.5,-1.26,0.14,2.57,1.09,0.01,">1 nonsynonymous","T55I D59R G146Q",3
"lib1","SARS-CoV-2","AAAAAAATTTTACTGG",7,39.8,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N13S D34G F44K L57A V115N V153M",6
"lib1","SARS-CoV-2","AAAAAACAAAATGACA",7,67.11,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N64L V71K R124S",3
"lib1","SARS-CoV-2","AAAAAACAAACCCAGT",3,25.77,9.88,-0.89,0.07,2.88,1.04,0,">1 nonsynonymous","N1S Y91W",2
"lib1","SARS-CoV-2","AAAAAACAAATAACTA",1,16.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L131V Q168S P177E",3
"lib1","SARS-CoV-2","AAAAAACAACAATATC",2,22.25,10.83,0.07,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAACAACTCATTG",1,4.01,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAAAAACAAGAACTTC",1,11.62,10.77,0.01,0.04,2.96,1.03,0,"1 nonsynonymous","N1Q",1
"lib1","SARS-CoV-2","AAAAAACAAGTCTCAA",8,220.93,8.96,-1.81,0.12,2.03,1.1,0.01,">1 nonsynonymous","K56I Q176L",2
"lib1","SARS-CoV-2","AAAAAACACAACAGTA",2,49.32,7.02,-3.74,0.42,1.5,1.15,0.05,">1 nonsynonymous","S19L I142S",2
"lib1","SARS-CoV-2","AAAAAACACACAACTC",1,7.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2L C61L R73I Y121V",4
"lib1","SARS-CoV-2","AAAAAACACATAGCAA",1,13.19,10.76,0,0.05,3,1.01,0,">1 nonsynonymous","N4T A89S",2
"lib1","SARS-CoV-2","AAAAAACACTACTCCA",5,18.9,8.3,-2.46,0.18,2.29,1.12,0.02,">1 nonsynonymous","K26N Q84A S113I",3
"lib1","SARS-CoV-2","AAAAAACAGATCACGC",2,65.24,9.81,-0.96,0.09,2.33,1.07,0,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","AAAAAACAGTAAGGCA",4,16.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q A89L",2
"lib1","SARS-CoV-2","AAAAAACATATTGAAG",1,0.48,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","AAAAAACATCTGCATG",24,465.25,10.78,0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAACCAAAAATCC",4,106.68,9.78,-0.98,0.05,2.73,1.02,0,">1 nonsynonymous","P133Q E154V",2
"lib1","SARS-CoV-2","AAAAAACCAAAAGAAA",4,19.53,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S43L Y50L N107H",3
"lib1","SARS-CoV-2","AAAAAACCAACGCACA",9,82.77,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I2D N13L F44D N107F N151K",5
"lib1","SARS-CoV-2","AAAAAACCAAGCCACA",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S C61L T85S D112H P149Y G152M N171Y",7
"lib1","SARS-CoV-2","AAAAAACCAAGTGTGA",1,21.18,10.34,-0.43,0.06,2.84,1.12,0,"1 nonsynonymous","E76W",1
"lib1","SARS-CoV-2","AAAAAACCATGTGCAA",3,29.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","W106E C150S V173R",3
"lib1","SARS-CoV-2","AAAAAACCATTATACG",4,32.91,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","E10L T85S N107A I142Y L162C",5
"lib1","SARS-CoV-2","AAAAAACCCAGAGAGG",3,6.03,NA,NA,NA,NA,NA,NA,"stop","D98* S113A S164M V173G",4
"lib1","SARS-CoV-2","AAAAAACCCTAAAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A T201K",2
"lib1","SARS-CoV-2","AAAAAACCCTCACTAG",2,6.12,NA,NA,NA,NA,NA,NA,"stop","I28* L162D P169H",3
"lib1","SARS-CoV-2","AAAAAACCTATCCCAA",2,69.83,8.87,-1.9,0.12,2.13,1.11,0.01,">1 nonsynonymous","D90Y D98F G174E",3
"lib1","SARS-CoV-2","AAAAAACGAATGCGGA",3,0.52,NA,NA,NA,NA,NA,NA,"stop","N120S K128T K132Y F167* T201A",5
"lib1","SARS-CoV-2","AAAAAACGACCAATAT",6,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N I104Y N171R R179S",4
"lib1","SARS-CoV-2","AAAAAACGAGCGGCTG",4,10.17,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S41A C61I F99N K132Y P169S",5
"lib1","SARS-CoV-2","AAAAAACGAGTATAAT",5,0.13,NA,NA,NA,NA,NA,NA,"stop","D90R Q176*",2
"lib1","SARS-CoV-2","AAAAAACGATAACAGC",3,113.55,10.54,-0.22,0.06,2.9,1,0,">1 nonsynonymous","T15P H189I",2
"lib1","SARS-CoV-2","AAAAAACGGAAAAGTG",1,7.06,9.3,-1.46,0.06,2.93,1.03,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","AAAAAACGGACAAGTA",5,32.41,7.18,-3.59,0.32,1.5,1.12,0.02,">1 nonsynonymous","F62L F167M",2
"lib1","SARS-CoV-2","AAAAAACGGTTAAATA",6,46.88,8.38,-2.38,0.23,1.5,1.11,0.02,"1 nonsynonymous","I88Q",1
"lib1","SARS-CoV-2","AAAAAACGGTTGCATA",4,24.64,10.92,0.16,0.23,2.62,1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAACGTATCCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","AAAAAACGTGTTAGAG",6,1.86,NA,NA,NA,NA,NA,NA,"stop","I88R D97F R179V T201*",4
"lib1","SARS-CoV-2","AAAAAACGTTAATCAG",2,0.28,NA,NA,NA,NA,NA,NA,"stop","A67D G86P F99N L111*",4
"lib1","SARS-CoV-2","AAAAAACGTTAGGCAC",6,107.18,9.76,-1.01,0.04,2.71,1.04,0,">1 nonsynonymous","T170M V173A",2
"lib1","SARS-CoV-2","AAAAAACTAAAATATA",3,0.7,NA,NA,NA,NA,NA,NA,"stop","S113* Y121V",2
"lib1","SARS-CoV-2","AAAAAACTAAACTAAA",8,29.02,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F44T P54T G86L S113W",4
"lib1","SARS-CoV-2","AAAAAACTAACATAAA",2,66.7,10.66,-0.1,0.06,2.9,1.05,0,">1 nonsynonymous","C61V K94R",2
"lib1","SARS-CoV-2","AAAAAACTAACATGAG",2,58.98,6,-4.76,1.05,1.5,1.14,0.01,">1 nonsynonymous","S43C W106L Y165F",3
"lib1","SARS-CoV-2","AAAAAACTAAGGCACA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S G101M",2
"lib1","SARS-CoV-2","AAAAAACTACCGAAAC",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I C49L F99L",3
"lib1","SARS-CoV-2","AAAAAACTAGACGTAC",11,0.36,NA,NA,NA,NA,NA,NA,"stop","A14E S43R V115F P133K G166*",5
"lib1","SARS-CoV-2","AAAAAACTATATAATT",12,142.62,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L60H S113L E135Q T148V Y159A",5
"lib1","SARS-CoV-2","AAAAAACTATTAATGA",1,18.66,8.71,-2.05,0.19,1.88,1.19,0.02,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","AAAAAACTCTAAAAAA",1,5.15,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5D A14V Y39F K94D F99P P133L Y159T",7
"lib1","SARS-CoV-2","AAAAAACTTGAAATAC",5,41.8,8.55,-2.21,0.26,1.5,1.27,0.03,">1 nonsynonymous","Y93L K199W",2
"lib1","SARS-CoV-2","AAAAAAGAAACGACGT",1,44.99,10.88,0.12,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAGAAAGAAATA",8,119.24,9.98,-0.79,0.05,2.55,1.08,0,">1 nonsynonymous","T15V A22E C61W",3
"lib1","SARS-CoV-2","AAAAAAGAACGAGCAG",7,67.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C49S K94T Q168C",3
"lib1","SARS-CoV-2","AAAAAAGAAGCTATCA",1,55.35,6.72,-4.04,0.19,1.5,1.11,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","AAAAAAGAATTAAATC",1,24.08,9.31,-1.46,0.16,1.73,1.09,0.01,">1 nonsynonymous","L5D K94L",2
"lib1","SARS-CoV-2","AAAAAAGAATTCGCTT",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L V103L E141I",3
"lib1","SARS-CoV-2","AAAAAAGACCACGAAT",2,78.37,10.47,-0.3,0.05,2.9,1,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","AAAAAAGACTGCAATC",3,60.25,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V71E A105L H189C",3
"lib1","SARS-CoV-2","AAAAAAGACTTATATA",8,172.69,10.78,0.02,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAGAGAATAAGC",13,99.68,6.26,-4.5,0.55,1.5,1.15,0.02,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","AAAAAAGAGATTATCA",5,11.06,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y21S N118P P133R",3
"lib1","SARS-CoV-2","AAAAAAGAGTTTTACT",1,22.44,10.74,-0.03,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAGATAAATATT",2,78.23,10.72,-0.05,0.05,2.87,1.08,0,"1 nonsynonymous","Q163G",1
"lib1","SARS-CoV-2","AAAAAAGATAAGGACA",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K D59G D98T I104Q",4
"lib1","SARS-CoV-2","AAAAAAGATAATTAGT",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D90N N151M",3
"lib1","SARS-CoV-2","AAAAAAGATTTACCAT",1,47.02,10.43,-0.33,0.03,2.92,1.03,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","AAAAAAGCAAAGATGG",1,11.42,10.65,-0.12,0.09,2.87,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAAGCAATCGGCT",4,19.57,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R25S S41M V52H D98L R136W",5
"lib1","SARS-CoV-2","AAAAAAGCACAATACG",4,27.13,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","G86N Y93W W106P",3
"lib1","SARS-CoV-2","AAAAAAGCCCAGCTGA",3,56.22,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S53M F99G G146P V180L",4
"lib1","SARS-CoV-2","AAAAAAGCTCAAGTGT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","L122* T140D",2
"lib1","SARS-CoV-2","AAAAAAGCTGAATATA",4,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y K132P",2
"lib1","SARS-CoV-2","AAAAAAGGCTAGACAT",1,50.26,10.34,-0.42,0.04,2.89,1.04,0,">1 nonsynonymous","F8I N24V",2
"lib1","SARS-CoV-2","AAAAAAGGTGAAGAAG",1,21.88,10.52,-0.24,0.16,2.9,1.11,0.01,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","AAAAAAGTAACAATGT",2,68.39,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G9S A14Y Y119N C150T",4
"lib1","SARS-CoV-2","AAAAAAGTACACATTG",9,31.16,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C102G G116R S200L",3
"lib1","SARS-CoV-2","AAAAAAGTACACTAAT",10,5.51,NA,NA,NA,NA,NA,NA,"stop","A33* G152A",2
"lib1","SARS-CoV-2","AAAAAAGTACCTGTGA",5,1.28,NA,NA,NA,NA,NA,NA,"stop","T15S N40F A105* R124H I138T",5
"lib1","SARS-CoV-2","AAAAAAGTAGAAAATA",1,1.44,NA,NA,NA,NA,NA,NA,"stop","C6* A18V S200M",3
"lib1","SARS-CoV-2","AAAAAAGTAGAATTCT",2,28.4,8.54,-2.22,0.23,1.5,1.09,0.03,">1 nonsynonymous","F44P W106A",2
"lib1","SARS-CoV-2","AAAAAAGTCAGCTTAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","Y121* Q168A Y175*",3
"lib1","SARS-CoV-2","AAAAAAGTCCGCTGGA",5,78.13,10.62,-0.15,0.05,2.92,1.04,0,"1 nonsynonymous","L95M",1
"lib1","SARS-CoV-2","AAAAAAGTGCCCTTTA",1,27.13,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","V20G V153R C158R",3
"lib1","SARS-CoV-2","AAAAAAGTGCTGAACC",11,176.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N110S L131R Q176T",3
"lib1","SARS-CoV-2","AAAAAAGTGTCAGCCA",4,29.34,6,-4.76,2,3,1.11,0,">1 nonsynonymous","A145S V180N",2
"lib1","SARS-CoV-2","AAAAAAGTTAAAATGT",6,116.63,9.94,-0.82,0.07,2.19,1.05,0,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","AAAAAAGTTATAATCG",3,0,NA,NA,NA,NA,NA,NA,"stop","P7F S19Y C49M V65* L95* S139Q Q168A",7
"lib1","SARS-CoV-2","AAAAAAGTTATTGAAC",3,85.2,9.06,-1.71,0.11,2.35,1.12,0,">1 nonsynonymous","R16V F44N D90C",3
"lib1","SARS-CoV-2","AAAAAAGTTGTACAGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","AAAAAATAAACGTCAA",3,38.11,6.11,-4.66,0.84,1.5,1.15,0.02,">1 nonsynonymous","A89I F99L E154D",3
"lib1","SARS-CoV-2","AAAAAATAAAGGCATC",2,30.03,8.84,-1.92,0.07,2.89,1.07,0,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","AAAAAATAAATATAAT",1,26.38,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A14F N64T K87S D97Q G117S",5
"lib1","SARS-CoV-2","AAAAAATAAATCTAAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","K87T V173*",2
"lib1","SARS-CoV-2","AAAAAATAACTTCTAA",8,85.93,10.26,-0.5,0.05,2.81,1.07,0,">1 nonsynonymous","V20A N120S",2
"lib1","SARS-CoV-2","AAAAAATAAGTCTTAA",3,6.6,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","F17S F167V",2
"lib1","SARS-CoV-2","AAAAAATACCAAGGGG",1,32.46,10.7,-0.07,0.09,2.83,1.05,0,">1 nonsynonymous","D59Y G152K",2
"lib1","SARS-CoV-2","AAAAAATACTCGTCCG",4,30.17,10.2,-0.57,0.14,2.23,1.02,0.01,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","AAAAAATAGAAGTGAA",1,28.83,10.95,0.18,0.13,2.86,1.07,0.01,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","AAAAAATAGGCAACAG",4,0.04,NA,NA,NA,NA,NA,NA,"stop","Y21L N64M V103* F167S",4
"lib1","SARS-CoV-2","AAAAAATATAACAACG",9,16.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S43V N107P Q144L Q168E",4
"lib1","SARS-CoV-2","AAAAAATATAATAACA",2,10.02,11.04,0.27,0.09,2.8,1.1,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","AAAAAATATCAATTCG",4,0.2,NA,NA,NA,NA,NA,NA,"stop","V37I A89S Y119K Y175T V181S C195*",6
"lib1","SARS-CoV-2","AAAAAATATCCTAATA",2,34.77,10.67,-0.09,0.07,2.9,1.09,0,"1 nonsynonymous","L122C",1
"lib1","SARS-CoV-2","AAAAAATATGAATAAA",1,7.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L I88V I104G Q168H T193Y V194G",6
"lib1","SARS-CoV-2","AAAAAATCAAAGCATA",9,21.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49L P82S D98L F126V",4
"lib1","SARS-CoV-2","AAAAAATCATCAATTA",1,17.69,10.72,-0.04,0.1,2.86,1.07,0.01,">1 nonsynonymous","I142T E154S",2
"lib1","SARS-CoV-2","AAAAAATCCACACGAA",1,5.88,10.15,-0.61,0.14,2.82,1,0.01,">1 nonsynonymous","Y39S Q84R T140G",3
"lib1","SARS-CoV-2","AAAAAATCCTAAAACT",2,41.51,10.57,-0.2,0.06,2.94,1,0,">1 nonsynonymous","P7Q G9R",2
"lib1","SARS-CoV-2","AAAAAATCGCAGTTCC",7,98.01,6,-4.76,0.73,1.5,1.14,0.01,">1 nonsynonymous","S53F Y91F R124W",3
"lib1","SARS-CoV-2","AAAAAATCTAGCCTAG",2,17.57,6,-4.76,0.8,1.5,1.17,0.02,">1 nonsynonymous","N58L F62V S69N V77Q D98W L122C",6
"lib1","SARS-CoV-2","AAAAAATGAATCTAAT",5,95.79,9.72,-1.04,0.12,2.28,1.13,0.01,">1 nonsynonymous","N4V C31K V37D",3
"lib1","SARS-CoV-2","AAAAAATGACAAGAAC",10,150.35,8.41,-2.35,0.26,1.5,1.04,0.02,">1 nonsynonymous","R27E G83V F160Y Y178S",4
"lib1","SARS-CoV-2","AAAAAATGACACAGGA",2,10.01,9.41,-1.35,0.24,2.36,1.07,0.02,">1 nonsynonymous","F8E R78A T201E",3
"lib1","SARS-CoV-2","AAAAAATGAGCTTAAT",5,52.59,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28C C61T D98I N157Y",4
"lib1","SARS-CoV-2","AAAAAATGATAACCAA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","AAAAAATGATACTAGT",1,6.76,6,-4.76,1.64,2,1.09,0.01,">1 nonsynonymous","A42K I72S E76F",3
"lib1","SARS-CoV-2","AAAAAATGCAACAGAA",12,11.23,NA,NA,NA,NA,NA,NA,"stop","S45T T55S I80R I104* E141S F160M G174K",7
"lib1","SARS-CoV-2","AAAAAATGGATCGACG",4,12.18,6,-4.76,1.42,3,1.04,0,">1 nonsynonymous","I28A T46L C158I",3
"lib1","SARS-CoV-2","AAAAAATGGTGAAGTA",6,24.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12Y D98N Y119T L183D",4
"lib1","SARS-CoV-2","AAAAAATGTATTGGTT",2,7.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","AAAAAATGTCATACTA",2,74.26,10.72,-0.04,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAAATGTGTCTGTA",12,94.22,9.9,-0.86,0.1,2.11,1.03,0,"1 nonsynonymous","F8H",1
"lib1","SARS-CoV-2","AAAAAATTAACAATTA",3,26.48,7.83,-2.93,0.25,1.5,1.07,0.02,">1 nonsynonymous","N1H L5E N130F R136S Y175H S184R",6
"lib1","SARS-CoV-2","AAAAAATTAATGCGGT",3,34.16,8.16,-2.61,0.13,1.79,1.1,0.01,"1 nonsynonymous","G86K",1
"lib1","SARS-CoV-2","AAAAAATTAGTCAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","N40L I88* N118D V173M",4
"lib1","SARS-CoV-2","AAAAAATTCCTTGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28C Y175F",2
"lib1","SARS-CoV-2","AAAAAATTTAAATCAA",4,62.06,10.31,-0.45,0.03,2.91,1.03,0,">1 nonsynonymous","P7A C61Y E141R",3
"lib1","SARS-CoV-2","AAAAAATTTAACCTGA",7,16.59,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N24Y A33Y C49N K87M P149E",5
"lib1","SARS-CoV-2","AAAAAATTTAGAGGAA",4,29.4,10.06,-0.71,0.06,2.85,1.07,0,">1 nonsynonymous","Y35T K87N T201Q",3
"lib1","SARS-CoV-2","AAAAAATTTCCGAGTG",8,61.86,8.87,-1.9,0.22,1.53,1.21,0.03,">1 nonsynonymous","A14V F44S D90R",3
"lib1","SARS-CoV-2","AAAAAATTTTTCAAAA",2,56.11,10.69,-0.07,0.08,2.9,1.08,0,">1 nonsynonymous","Y123S Y178H",2
"lib1","SARS-CoV-2","AAAAACAAAATACACA",3,49.14,10.21,-0.55,0.06,2.89,1.05,0,">1 nonsynonymous","S29T D90C N130Q",3
"lib1","SARS-CoV-2","AAAAACAAAATGCTGG",4,30.31,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","V173S V182N",2
"lib1","SARS-CoV-2","AAAAACAAACAATATC",1,53.71,8.99,-1.78,0.18,1.5,1.11,0.01,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","AAAAACAACAAAACAT",1,1305.67,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I142N V182M",2
"lib1","SARS-CoV-2","AAAAACAACATACGGG",7,18.99,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","N13F V103A",2
"lib1","SARS-CoV-2","AAAAACAACCAGTTGA",3,29.87,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","V52M D68T D90S N120S",4
"lib1","SARS-CoV-2","AAAAACAACCCAGCGA",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P L162Q",2
"lib1","SARS-CoV-2","AAAAACAACCTCGCGT",4,8.91,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","N1D A42P N107D Y121G S129M N171F",6
"lib1","SARS-CoV-2","AAAAACAACGAATTAA",3,13.71,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","V103H",1
"lib1","SARS-CoV-2","AAAAACAAGAAATAAT",4,19.66,6,-4.76,2,3,1.11,0,">1 nonsynonymous","K26M G117A L162A P197W",4
"lib1","SARS-CoV-2","AAAAACAAGAACATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","I28G V52T D90* W106L E135V",5
"lib1","SARS-CoV-2","AAAAACAAGAACGGGA",7,58.51,9.75,-1.02,0.1,2.08,1.06,0,">1 nonsynonymous","N58L N107S N120Q",3
"lib1","SARS-CoV-2","AAAAACAAGACGGACG",1,44.49,10.48,-0.28,0.07,2.88,1,0,">1 nonsynonymous","A33I D59Q",2
"lib1","SARS-CoV-2","AAAAACAAGTTGCATA",3,13.58,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K48L C61V G86S S164H",4
"lib1","SARS-CoV-2","AAAAACAATAAAATTA",4,27.19,10.68,-0.08,0.06,2.92,1.03,0,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","AAAAACAATAAGTGAA",2,60.99,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y50S A145D",2
"lib1","SARS-CoV-2","AAAAACAATAGAAACA",3,13.19,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V32F L131E G155V",3
"lib1","SARS-CoV-2","AAAAACACAACCAGAT",4,35.72,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K26P S139G G146I T170H R179I",5
"lib1","SARS-CoV-2","AAAAACACAAGTAGCA",3,31.8,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","N4I N13V Y123D P177S",4
"lib1","SARS-CoV-2","AAAAACACAATCTAGC",2,25.79,7.43,-3.33,0.43,1.5,1.24,0.06,">1 nonsynonymous","G9V T15S W23M F160D",4
"lib1","SARS-CoV-2","AAAAACACAGGCATCT",1,0.77,NA,NA,NA,NA,NA,NA,"stop","E10* T140M",2
"lib1","SARS-CoV-2","AAAAACACCCAATCAT",4,41.75,6.55,-4.21,0.36,1.5,1.08,0.01,">1 nonsynonymous","V20W G83A S139V Q144V T148L",5
"lib1","SARS-CoV-2","AAAAACACCCCCTCAC",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L Y165S L183R",3
"lib1","SARS-CoV-2","AAAAACACCGAGCCCA",2,6.63,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N92S I138R G152D Q163C",4
"lib1","SARS-CoV-2","AAAAACACCGCACATA",2,129.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A67P P96S Y119N L188V",4
"lib1","SARS-CoV-2","AAAAACACGAAGACTA",6,1.05,NA,NA,NA,NA,NA,NA,"stop","I2S A81G N107*",3
"lib1","SARS-CoV-2","AAAAACACGAAGCCAC",3,39.44,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60S D68R Q84N T100C",4
"lib1","SARS-CoV-2","AAAAACACTAAGAACA",6,60.45,10.09,-0.67,0.09,2.71,1,0,">1 nonsynonymous","N58L R78F",2
"lib1","SARS-CoV-2","AAAAACACTACCATAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D T63P N109S",3
"lib1","SARS-CoV-2","AAAAACACTAGTTACT",2,47.7,10.45,-0.32,0.07,2.83,1.08,0,">1 nonsynonymous","T15G V115K",2
"lib1","SARS-CoV-2","AAAAACACTCAGGATC",2,0.33,NA,NA,NA,NA,NA,NA,"stop","R27* Y35A P82Y D90Q",4
"lib1","SARS-CoV-2","AAAAACAGAACTAAGC",3,169.4,10.19,-0.57,0.08,2.86,1.02,0,">1 nonsynonymous","C6N N120K",2
"lib1","SARS-CoV-2","AAAAACAGACAACCTA",1,14.52,10.79,0.03,0.08,2.98,1,0,">1 nonsynonymous","D90N S164F T201L",3
"lib1","SARS-CoV-2","AAAAACAGTATCCGAA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","I2C V32G A42T T55* K94Y G152H",6
"lib1","SARS-CoV-2","AAAAACATAATAAGTA",5,1.5,NA,NA,NA,NA,NA,NA,"stop","T15R E76F D98*",3
"lib1","SARS-CoV-2","AAAAACATATGAGACC",5,1.07,NA,NA,NA,NA,NA,NA,"stop","A14L A105K Y165* V173W V194L",5
"lib1","SARS-CoV-2","AAAAACATCCCCCGTA",3,1.7,NA,NA,NA,NA,NA,NA,"stop","R73L Y91*",2
"lib1","SARS-CoV-2","AAAAACATGGTTGCAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","G9W T46S V173H S184*",4
"lib1","SARS-CoV-2","AAAAACATTATAAAAT",4,3.67,NA,NA,NA,NA,NA,NA,"stop","A89M W106* L131S Y178V T201K",5
"lib1","SARS-CoV-2","AAAAACATTCAAAACC",8,29.52,10.41,-0.36,0.1,2.23,1,0,">1 nonsynonymous","S19E Q168W",2
"lib1","SARS-CoV-2","AAAAACATTGCAGGGA",2,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M A14E Y21G W106F F126I N151K L162A",7
"lib1","SARS-CoV-2","AAAAACATTGCATCTT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16T C49N P149T N157S",4
"lib1","SARS-CoV-2","AAAAACATTTCCATCA",3,32.73,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R73F V180L",2
"lib1","SARS-CoV-2","AAAAACCAAAAGCCGG",5,51.13,8.66,-2.1,0.13,1.9,1.1,0.01,">1 nonsynonymous","T15N N118L",2
"lib1","SARS-CoV-2","AAAAACCAAAATTACC",6,25.99,8.86,-1.9,0.33,1.59,1.2,0.04,">1 nonsynonymous","N13M K48F",2
"lib1","SARS-CoV-2","AAAAACCAATTGCCAT",2,53.06,10.17,-0.6,0.06,2.83,1.03,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","AAAAACCAATTTGATG",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F Y21S N40S Q84L F99K",5
"lib1","SARS-CoV-2","AAAAACCACAGTCTAT",10,0.23,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib1","SARS-CoV-2","AAAAACCACCGCTTGT",3,40.27,10.81,0.05,0.05,2.91,1.05,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AAAAACCAGCTTGGGT",2,69.28,10.68,-0.09,0.07,2.89,1.04,0,">1 nonsynonymous","I2W N58S",2
"lib1","SARS-CoV-2","AAAAACCAGTTTAAAC",2,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T P197R",2
"lib1","SARS-CoV-2","AAAAACCATATGGAAT",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M A67S F160R V173Q L187S",5
"lib1","SARS-CoV-2","AAAAACCATGAATTAG",1,44.95,9.95,-0.81,0.09,2.75,1.08,0,"1 nonsynonymous","C6H",1
"lib1","SARS-CoV-2","AAAAACCATTCACCGG",1,21.56,6,-4.76,2,1.5,1.33,0.04,"1 nonsynonymous","V20M",1
"lib1","SARS-CoV-2","AAAAACCCAAAGAACA",2,8.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42T Q84L N118K P149L",4
"lib1","SARS-CoV-2","AAAAACCCAGTTCGGT",1,11.54,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10Q N58T D90L T140F",4
"lib1","SARS-CoV-2","AAAAACCCCAGTGTGG",6,143.13,10.36,-0.41,0.05,2.88,1.01,0,">1 nonsynonymous","D90Y K198Y",2
"lib1","SARS-CoV-2","AAAAACCCCATTGATA",4,25.81,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y91Q Y121I G174L",3
"lib1","SARS-CoV-2","AAAAACCCCCGCAAGT",7,31.8,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P54L P82K I88L P149S",4
"lib1","SARS-CoV-2","AAAAACCCTCCAGCAT",6,143.4,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S41G K87E D98N K128D G152C Y178L",6
"lib1","SARS-CoV-2","AAAAACCGAACAAAAA",1,7.67,8.69,-2.07,0.21,1.94,1.21,0.02,">1 nonsynonymous","A18M G74S",2
"lib1","SARS-CoV-2","AAAAACCGAACGTGGC",2,34.34,6,-4.76,1.3,1.5,1.18,0.01,">1 nonsynonymous","L57G Y119W P169L",3
"lib1","SARS-CoV-2","AAAAACCGACACGGGA",5,41.86,10.75,-0.01,0.11,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACCGACGGAGAC",7,47.07,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I88Y V173N",2
"lib1","SARS-CoV-2","AAAAACCGAGGTTGAA",1,12.72,9.9,-0.87,0.15,2.51,1.03,0.02,">1 nonsynonymous","D34T F160G",2
"lib1","SARS-CoV-2","AAAAACCGATAGGAGA",11,53.17,6.11,-4.65,0.79,1.5,1.2,0.02,">1 nonsynonymous","C49R G86A G116R G146C T170R",5
"lib1","SARS-CoV-2","AAAAACCGCCGCTAAG",8,63.13,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","R25M V37Y G86S P96Q",4
"lib1","SARS-CoV-2","AAAAACCGGACTGAAT",7,56.86,6,-4.76,0.75,1.5,1.15,0.01,">1 nonsynonymous","S113E R124F",2
"lib1","SARS-CoV-2","AAAAACCGGGACATAC",2,32.28,10.67,-0.1,0.04,2.93,1.01,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AAAAACCTAAAACGAC",5,21.15,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","V37C S41L Y93I A105Y P149F G155C Q168L",7
"lib1","SARS-CoV-2","AAAAACCTAGCAAGTG",1,8.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACCTATTTACAT",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A Y175T L183N",3
"lib1","SARS-CoV-2","AAAAACCTCCGTCAAT",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36M K87W V103D S108N N130T",5
"lib1","SARS-CoV-2","AAAAACCTCGAGAAAT",1,1.98,NA,NA,NA,NA,NA,NA,"stop","Y119* S129D Y165R",3
"lib1","SARS-CoV-2","AAAAACCTGCATGTAA",22,175.29,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21N L38W S45D Y50C S139T C158D F167S",7
"lib1","SARS-CoV-2","AAAAACCTGGCGAAAA",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W F17E P82Q N92G F134G K199M",6
"lib1","SARS-CoV-2","AAAAACCTGGTTCGTA",11,70.05,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51N P82S D97V Y121S",4
"lib1","SARS-CoV-2","AAAAACCTGGTTTACT",14,255.73,9.23,-1.53,0.06,2.82,1.11,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","AAAAACCTGTAAATTA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I D97G",2
"lib1","SARS-CoV-2","AAAAACCTGTACATGG",5,2.69,NA,NA,NA,NA,NA,NA,"stop","N13L R73M I142H S200*",4
"lib1","SARS-CoV-2","AAAAACCTGTGACATG",3,12.43,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","I2T V20S N107H F134I Q144D",5
"lib1","SARS-CoV-2","AAAAACCTTATCTGAC",9,129.93,9.49,-1.28,0.13,1.85,1.12,0.01,">1 nonsynonymous","K132T L162C",2
"lib1","SARS-CoV-2","AAAAACCTTTGACTGA",2,18.44,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","F44R C61T N107H Y123W G174Q",5
"lib1","SARS-CoV-2","AAAAACGAACAAAAAA",2,92.79,10.33,-0.43,0.05,2.87,1.01,0,"1 nonsynonymous","P7F",1
"lib1","SARS-CoV-2","AAAAACGAATTTTATA",7,1.18,NA,NA,NA,NA,NA,NA,"stop","W23N P82* K87Y N151L",4
"lib1","SARS-CoV-2","AAAAACGACAACAGAT",1,7.19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51D G86R R136V",3
"lib1","SARS-CoV-2","AAAAACGACACTCTTT",3,71.29,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A89Y Y159G",2
"lib1","SARS-CoV-2","AAAAACGACTTCCAAA",1,8.94,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","F70M Y123H S129W P161R V173W",5
"lib1","SARS-CoV-2","AAAAACGAGGACGAAA",8,184.47,8.84,-1.92,0.16,1.53,1.16,0.01,">1 nonsynonymous","F17A I138K E141H",3
"lib1","SARS-CoV-2","AAAAACGATAAAGGAC",8,35.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P149R F156C F167K",3
"lib1","SARS-CoV-2","AAAAACGATATAAGAA",4,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A R73S R136V C158N Y178H L183F",6
"lib1","SARS-CoV-2","AAAAACGATTGCCACG",14,122.55,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","S69E G86R D137V V180F",4
"lib1","SARS-CoV-2","AAAAACGCACCACTAG",4,7.8,NA,NA,NA,NA,NA,NA,"stop","F12M L57*",2
"lib1","SARS-CoV-2","AAAAACGCACGTCCTG",7,38.53,6,-4.76,1.28,1.5,1.13,0.02,">1 nonsynonymous","S53A T63M I72K G116R S139C",5
"lib1","SARS-CoV-2","AAAAACGCAGAATCAT",7,73.75,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A18R Y93T",2
"lib1","SARS-CoV-2","AAAAACGCGACCCGAT",4,21.89,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","D98S R179W",2
"lib1","SARS-CoV-2","AAAAACGCTCACCCTC",2,40.56,6,-4.76,1.84,1.5,1.09,0.01,">1 nonsynonymous","R25Y L60S W106C T148A G166L R179H",6
"lib1","SARS-CoV-2","AAAAACGGAAACAGAG",3,36.14,6.54,-4.23,0.45,1.5,1.1,0.02,">1 nonsynonymous","N4L D59Y D90H R136M",4
"lib1","SARS-CoV-2","AAAAACGGAAGCTTGG",2,22.19,9.62,-1.14,0.18,2.51,1.04,0.01,">1 nonsynonymous","S139M V173G",2
"lib1","SARS-CoV-2","AAAAACGGAGATCAAA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N T55V N92I",3
"lib1","SARS-CoV-2","AAAAACGGAGGATTTA",2,23.64,10.27,-0.49,0.07,2.97,1,0,"1 nonsynonymous","E154C",1
"lib1","SARS-CoV-2","AAAAACGGATTACTTC",5,88.99,10.7,-0.06,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACGGCAATTAGT",9,161.54,10.73,-0.03,0.07,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACGGTCCACGAC",9,31.95,10.52,-0.24,0.07,2.98,1,0,"1 nonsynonymous","E10G",1
"lib1","SARS-CoV-2","AAAAACGTAAAAAAAC",4,23.26,7.21,-3.55,0.4,1.5,1.06,0.04,">1 nonsynonymous","F99V Y121N",2
"lib1","SARS-CoV-2","AAAAACGTAGTAGCAA",1,5.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89V V180T",2
"lib1","SARS-CoV-2","AAAAACGTAGTCACTA",4,26.46,10.71,-0.06,0.06,2.89,1.05,0,">1 nonsynonymous","S43I D59G",2
"lib1","SARS-CoV-2","AAAAACGTGATTGCAT",10,147.18,9.94,-0.83,0.09,2.31,1.04,0,">1 nonsynonymous","R127H T148L",2
"lib1","SARS-CoV-2","AAAAACGTGCCCCCAG",1,7.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122A",1
"lib1","SARS-CoV-2","AAAAACGTGCGAAATT",8,60.04,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P133S Q144W T170P",3
"lib1","SARS-CoV-2","AAAAACGTGCGCATGG",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L G86N W106S",3
"lib1","SARS-CoV-2","AAAAACGTGGAACACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143H V153C L162S",3
"lib1","SARS-CoV-2","AAAAACGTTATAAACA",2,49.28,8.48,-2.29,0.15,2.26,1.1,0.01,">1 nonsynonymous","S113R N130M",2
"lib1","SARS-CoV-2","AAAAACGTTCACTCAT",2,12.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41L F99Y R124S G152C S164K",5
"lib1","SARS-CoV-2","AAAAACGTTCTTAAAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I2Y G9* D68R F99T A105L Y121* Q163T",7
"lib1","SARS-CoV-2","AAAAACGTTTTGACCA",3,6.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y G146P",2
"lib1","SARS-CoV-2","AAAAACTAAAAACAAT",1,102.78,8.45,-2.31,0.12,2.75,1.06,0.01,">1 nonsynonymous","L5M Y143I G166V A192R",4
"lib1","SARS-CoV-2","AAAAACTAAATCCAAG",1,0.73,NA,NA,NA,NA,NA,NA,"stop","S36* C61G Q144Y",3
"lib1","SARS-CoV-2","AAAAACTAATTGGGGA",7,106.75,6,-4.76,1.99,1.5,1.18,0.01,">1 nonsynonymous","F167T P197S",2
"lib1","SARS-CoV-2","AAAAACTACGAGTAGT",3,40.77,10.21,-0.56,0.1,2.6,1,0.01,">1 nonsynonymous","T3Q G83V",2
"lib1","SARS-CoV-2","AAAAACTACTTTAGCT",2,2.32,NA,NA,NA,NA,NA,NA,"stop","V20A G51P S53F D97L P197*",5
"lib1","SARS-CoV-2","AAAAACTATACGGTTT",2,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R G146L",2
"lib1","SARS-CoV-2","AAAAACTATATTTGGA",1,34.6,11.04,0.28,0.1,2.88,1.05,0,">1 nonsynonymous","I2R Q163V",2
"lib1","SARS-CoV-2","AAAAACTATCGCATCT",3,296.52,9.61,-1.15,0.07,2.66,1.1,0,">1 nonsynonymous","L60I Q176H",2
"lib1","SARS-CoV-2","AAAAACTATTATTCAG",6,156.64,10.79,0.02,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACTATTCCTTCA",5,27.75,10.7,-0.07,0.06,2.85,1.09,0,">1 nonsynonymous","C61D S200R",2
"lib1","SARS-CoV-2","AAAAACTCAAAAATGT",2,5.16,10.26,-0.51,0.36,1.5,1,0.05,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","AAAAACTCAATCGTTA",4,9.62,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N13R S69L F99Y",3
"lib1","SARS-CoV-2","AAAAACTCACCCTCCC",2,5.8,NA,NA,NA,NA,NA,NA,"stop","L38P C49L T85* I104L N107M L122V P149T",7
"lib1","SARS-CoV-2","AAAAACTCATAAGTGG",1,1.08,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAAAACTCATAGTAAC",3,10.63,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","S41G C49M G83L",3
"lib1","SARS-CoV-2","AAAAACTCCCTAGAAC",2,22.85,9.21,-1.55,0.23,1.66,1.14,0.02,">1 nonsynonymous","L57S P133E",2
"lib1","SARS-CoV-2","AAAAACTCGTCCCAGC",4,119.34,10.24,-0.53,0.07,2.73,1.01,0,">1 nonsynonymous","N4Y N13G D59S",3
"lib1","SARS-CoV-2","AAAAACTCTATCCATA",5,54.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86S A105L I142S",3
"lib1","SARS-CoV-2","AAAAACTCTCTAATAT",4,39.51,10.27,-0.5,0.06,2.84,1,0,">1 nonsynonymous","D90I S200V",2
"lib1","SARS-CoV-2","AAAAACTCTTCATTAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","E10* D68V A81S P96R C150E",5
"lib1","SARS-CoV-2","AAAAACTCTTCCTAAT",8,59.4,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V37M L95R N151S",3
"lib1","SARS-CoV-2","AAAAACTGAATTCGAC",10,61.91,6,-4.76,1.06,1.5,1.19,0.02,">1 nonsynonymous","S43Y V52P G86L T140H G174P",5
"lib1","SARS-CoV-2","AAAAACTGACAAGAAG",7,42.5,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","T3G W23L Y91E I138C C158F",5
"lib1","SARS-CoV-2","AAAAACTGACAGGAGG",6,21.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13W F17L A33N T85E Y93G",5
"lib1","SARS-CoV-2","AAAAACTGCCTTAGTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K Y91C N107M S139F N171T",5
"lib1","SARS-CoV-2","AAAAACTGGCAAGTAG",8,193.48,10.79,0.03,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACTTAACAAAAT",4,36.74,9.82,-0.95,0.24,1.91,1.07,0.03,">1 nonsynonymous","A18E R25T",2
"lib1","SARS-CoV-2","AAAAACTTATTATAGT",1,142.36,10.57,-0.2,0.04,2.92,1.02,0,">1 nonsynonymous","I2F G9V T100M",3
"lib1","SARS-CoV-2","AAAAACTTCAAATCGA",2,28.63,8.96,-1.81,0.19,1.5,1.25,0.02,">1 nonsynonymous","S45N F99V",2
"lib1","SARS-CoV-2","AAAAACTTCATGCCAG",2,65.62,10.65,-0.11,0.04,2.92,1.04,0,">1 nonsynonymous","L57M K114Q",2
"lib1","SARS-CoV-2","AAAAACTTCGACCAAG",3,10.45,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15R I88S C158V",3
"lib1","SARS-CoV-2","AAAAACTTTACTGCGG",2,33.94,10.64,-0.13,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAACTTTGGACAAA",2,28.77,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","C6Y N107K Y121I",3
"lib1","SARS-CoV-2","AAAAACTTTGGCTAAT",2,81.55,8.79,-1.97,0.08,2.08,1.1,0,">1 nonsynonymous","N118L N151W",2
"lib1","SARS-CoV-2","AAAAACTTTTCATTAA",1,49.16,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","Y50F G155S P177I",3
"lib1","SARS-CoV-2","AAAAAGAAAAAAGGCA",11,301.22,9.28,-1.49,0.08,2.31,1.1,0,">1 nonsynonymous","Y121V I138D",2
"lib1","SARS-CoV-2","AAAAAGAAAAGCGATA",3,118.92,10.79,0.03,0.05,2.89,1.07,0,"1 nonsynonymous","N64A",1
"lib1","SARS-CoV-2","AAAAAGAAAATAATGA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","S45I G86C E135*",3
"lib1","SARS-CoV-2","AAAAAGAAATACAACA",3,62.03,8.64,-2.12,0.2,1.5,1.11,0.02,">1 nonsynonymous","P7F A89N S200N",3
"lib1","SARS-CoV-2","AAAAAGAAATACCTAG",3,167.7,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19A Y91S D112R P161V",4
"lib1","SARS-CoV-2","AAAAAGAAATAGTCCC",3,42.53,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A81M D112T Y143K",3
"lib1","SARS-CoV-2","AAAAAGAAATCTTGAG",6,70.51,8.75,-2.01,0.07,2.93,1.07,0,"1 nonsynonymous","Y159L",1
"lib1","SARS-CoV-2","AAAAAGAACCTCAATA",2,22.94,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2L N107F S129T S139I",4
"lib1","SARS-CoV-2","AAAAAGAAGAAGGTAT",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C V115L C158H T170R",4
"lib1","SARS-CoV-2","AAAAAGAAGACTGCCA",2,15.86,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","F47I G74T G101S F126I",4
"lib1","SARS-CoV-2","AAAAAGAAGCTTGACA",2,14.89,10.74,-0.03,0.15,2.93,1.08,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAAAAGAAGGCCTGTG",6,75.01,10.78,0.01,0.07,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAAGAAGTAGACGC",3,111.31,10.69,-0.08,0.05,2.87,1.09,0,">1 nonsynonymous","A192V K199L",2
"lib1","SARS-CoV-2","AAAAAGAATAAACATA",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T F44Q I72M Y175H",4
"lib1","SARS-CoV-2","AAAAAGAATACTGCCT",4,90.28,10.25,-0.52,0.04,2.8,1.02,0,">1 nonsynonymous","G9Y T46S E141M F160S",4
"lib1","SARS-CoV-2","AAAAAGAATCCTGCTT",7,271.52,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","N4I A81R Y175E V180M",4
"lib1","SARS-CoV-2","AAAAAGAATTCCACCC",2,61.76,9.3,-1.46,0.08,2.8,1.11,0,">1 nonsynonymous","T63S Y119L P149S",3
"lib1","SARS-CoV-2","AAAAAGAATTTATACG",4,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S R136F F156W",3
"lib1","SARS-CoV-2","AAAAAGAATTTATGCA",1,55.24,8.84,-1.92,0.14,1.62,1.18,0.01,">1 nonsynonymous","I88A Y175F",2
"lib1","SARS-CoV-2","AAAAAGAATTTGATTA",5,54.97,9.82,-0.95,0.11,2.44,1.03,0,"1 nonsynonymous","K48G",1
"lib1","SARS-CoV-2","AAAAAGACAACATTCG",1,8.91,8.2,-2.56,0.32,1.59,1.19,0.03,">1 nonsynonymous","D137S G152S",2
"lib1","SARS-CoV-2","AAAAAGACAGCAAACG",2,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R T55G D137H E154T P161L",5
"lib1","SARS-CoV-2","AAAAAGACAGGAGATA",5,19.21,9.09,-1.67,0.3,1.56,1.12,0.06,">1 nonsynonymous","S43E K94E",2
"lib1","SARS-CoV-2","AAAAAGACATAACATA",2,40.58,6,-4.76,2,1.5,1.37,0.08,">1 nonsynonymous","I88N N120Y",2
"lib1","SARS-CoV-2","AAAAAGACCAACATTG",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V C195A",2
"lib1","SARS-CoV-2","AAAAAGACCACAAAAC",3,4.9,NA,NA,NA,NA,NA,NA,"stop","L5S L122*",2
"lib1","SARS-CoV-2","AAAAAGACCCCAAGAA",3,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4M F47S S113L",3
"lib1","SARS-CoV-2","AAAAAGACGAGCCCCA",2,15.57,10.48,-0.28,0.1,2.9,1.01,0.01,">1 nonsynonymous","I142V N151T",2
"lib1","SARS-CoV-2","AAAAAGACGCATGGTC",4,28.08,10.34,-0.43,0.08,2.92,1.06,0,">1 nonsynonymous","L5A A14C",2
"lib1","SARS-CoV-2","AAAAAGACGGAATTCG",1,53.24,10.74,-0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAGAGAAACCCAA",5,28.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9K C49Y A105R",3
"lib1","SARS-CoV-2","AAAAAGAGAACGCTAT",3,75.93,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31A S69I N120H I142G",4
"lib1","SARS-CoV-2","AAAAAGAGAAGCACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* K87G",2
"lib1","SARS-CoV-2","AAAAAGAGAAGTAATA",9,46.8,10.62,-0.15,0.06,2.92,1.04,0,"1 nonsynonymous","T85D",1
"lib1","SARS-CoV-2","AAAAAGAGACTGTGAA",12,84.28,8.82,-1.94,0.23,1.5,1.15,0.02,">1 nonsynonymous","L38T N120E S139C",3
"lib1","SARS-CoV-2","AAAAAGAGAGCTATGC",1,21.64,8.9,-1.86,0.12,2.53,1.02,0.01,">1 nonsynonymous","Y35T A67C I88V G174D",4
"lib1","SARS-CoV-2","AAAAAGAGCAGCCGTT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","G9* I142R",2
"lib1","SARS-CoV-2","AAAAAGAGCATAATGT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M N107A P161S P197M",4
"lib1","SARS-CoV-2","AAAAAGAGCTGTCAAC",3,20.09,6,-4.76,1.48,1.5,1.26,0.02,">1 nonsynonymous","T15R Y123A Y175S T201I",4
"lib1","SARS-CoV-2","AAAAAGAGGAAAAGTA",5,0.69,NA,NA,NA,NA,NA,NA,"stop","N110* Q144E",2
"lib1","SARS-CoV-2","AAAAAGAGGAACTGGC",2,1.48,NA,NA,NA,NA,NA,NA,"stop","N4R S43W K87* W106C T148N F160V T170S",7
"lib1","SARS-CoV-2","AAAAAGAGTAGGTACG",1,10.94,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P82R F167S",2
"lib1","SARS-CoV-2","AAAAAGAGTATTAAAA",7,7.68,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A42D L60S D90W V153N V181H",5
"lib1","SARS-CoV-2","AAAAAGAGTGCATCTA",4,4.92,NA,NA,NA,NA,NA,NA,"stop","N13C C49* S113I P169N T193M",5
"lib1","SARS-CoV-2","AAAAAGATAAATGTCA",5,82.86,8.27,-2.5,0.38,1.5,1,0.06,">1 nonsynonymous","Y91C F99T T148N F156L H189N",5
"lib1","SARS-CoV-2","AAAAAGATAACGGGGT",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V A14V V20G T201S",4
"lib1","SARS-CoV-2","AAAAAGATACCCAATC",1,52.46,9.19,-1.57,0.07,2.79,1.11,0,">1 nonsynonymous","T55G Q168L",2
"lib1","SARS-CoV-2","AAAAAGATACCCAGAT",4,1.87,NA,NA,NA,NA,NA,NA,"stop","E135P P149* N157Y",3
"lib1","SARS-CoV-2","AAAAAGATATGAATCC",1,46.1,10.72,-0.05,0.06,2.88,1.06,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","AAAAAGATCAAATAAG",2,16.02,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","D90N W106K G174V",3
"lib1","SARS-CoV-2","AAAAAGATCCAGACGC",4,22.24,9.32,-1.44,0.16,1.84,1.08,0.01,">1 nonsynonymous","V11S Q144P",2
"lib1","SARS-CoV-2","AAAAAGATGAACAAAG",8,31.67,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G146I F185K",2
"lib1","SARS-CoV-2","AAAAAGCAATAAGTAC",1,9.75,6.13,-4.63,0.98,1.5,1.07,0.04,">1 nonsynonymous","G86W P96S T140D",3
"lib1","SARS-CoV-2","AAAAAGCACAACTCTT",4,24.41,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D137G P161Y G196Q",3
"lib1","SARS-CoV-2","AAAAAGCACAAGATAA",2,25.6,6.41,-4.36,0.61,1.5,1.21,0.03,">1 nonsynonymous","T3R A18L T100Y C158G Q176G T201K",6
"lib1","SARS-CoV-2","AAAAAGCAGAAGTGCA",4,78.25,6,-4.76,2,3,1.23,0,">1 nonsynonymous","Y93S Y178N",2
"lib1","SARS-CoV-2","AAAAAGCAGCACACAA",5,79.56,10.51,-0.26,0.06,2.92,1,0,"1 nonsynonymous","K87W",1
"lib1","SARS-CoV-2","AAAAAGCATCAAGTAT",1,23.14,7.14,-3.62,0.38,1.5,1.23,0.05,">1 nonsynonymous","T3L W106T T140P",3
"lib1","SARS-CoV-2","AAAAAGCCCATACTTA",11,138.79,10.1,-0.66,0.06,2.72,1.02,0,">1 nonsynonymous","K48T T55S D98T E141P K198R",5
"lib1","SARS-CoV-2","AAAAAGCCCCATCAAT",2,119.32,10.57,-0.19,0.05,2.92,1.01,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","AAAAAGCCCGCTACAT",1,47.48,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F47Y K87S Y143M G152V",4
"lib1","SARS-CoV-2","AAAAAGCCCTATCTTG",2,21.76,10.88,0.11,0.07,2.94,1.01,0,"1 nonsynonymous","N110A",1
"lib1","SARS-CoV-2","AAAAAGCCTGTGTATG",4,54.26,10.35,-0.41,0.07,2.92,1,0,">1 nonsynonymous","I72V I104C S184A",3
"lib1","SARS-CoV-2","AAAAAGCCTGTTAGAG",7,26.97,9.94,-0.82,0.11,2.08,1.03,0.01,">1 nonsynonymous","Y39M E141A F185H",3
"lib1","SARS-CoV-2","AAAAAGCTAAATGACA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","R127S K198*",2
"lib1","SARS-CoV-2","AAAAAGCTAGTACAAG",2,15.39,10.76,-0.01,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAGCTATCACAAA",3,68.98,10.66,-0.1,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAGCTCGCAATCA",4,63.4,10.18,-0.58,0.03,2.92,1.02,0,"1 nonsynonymous","Y66K",1
"lib1","SARS-CoV-2","AAAAAGCTTATACAAA",7,360.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43T T46L N64E K87N N107R Q144L P161W P169R",8
"lib1","SARS-CoV-2","AAAAAGGAAAACGACT",7,258.75,8.19,-2.58,0.18,1.85,1.15,0.01,">1 nonsynonymous","A105S Q176G",2
"lib1","SARS-CoV-2","AAAAAGGAAGAGTGAA",1,0.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","AAAAAGGACATTGGAT",5,36.24,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","Y35N C49Y P82V T100L N130S T148R",6
"lib1","SARS-CoV-2","AAAAAGGACCCAAGCT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F99K",2
"lib1","SARS-CoV-2","AAAAAGGAGGGACTAT",2,11.14,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","S43W Y50R L95V R124H",4
"lib1","SARS-CoV-2","AAAAAGGCACGGTGTT",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S W106R P133L",3
"lib1","SARS-CoV-2","AAAAAGGCTTTTTTTA",6,33.47,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V103M F134K T201C",3
"lib1","SARS-CoV-2","AAAAAGGGACATGCCT",4,37.42,10.49,-0.28,0.1,2.93,1.09,0,"1 nonsynonymous","H189R",1
"lib1","SARS-CoV-2","AAAAAGGGATAGCTGT",3,30.26,9.37,-1.39,0.07,2.98,1.03,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","AAAAAGGGATCGGCTA",17,3.21,NA,NA,NA,NA,NA,NA,"stop","R16P S43* K56N G101E Q163A",5
"lib1","SARS-CoV-2","AAAAAGGGATTACCGA",5,30.77,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","K94S R127H E154V L183W T201C",5
"lib1","SARS-CoV-2","AAAAAGGGGAATTTCA",3,17.77,8.43,-2.34,0.42,1.5,1.07,0.07,">1 nonsynonymous","D97L W106S N157S",3
"lib1","SARS-CoV-2","AAAAAGGGGACAGAGT",5,59.29,8.35,-2.41,0.17,1.63,1.16,0.01,"1 nonsynonymous","N157I",1
"lib1","SARS-CoV-2","AAAAAGGGTCGGTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L38* D75E E141F",3
"lib1","SARS-CoV-2","AAAAAGGGTTGTAATA",8,79.98,10.05,-0.71,0.07,2.64,1.03,0,">1 nonsynonymous","P7I E141K",2
"lib1","SARS-CoV-2","AAAAAGGTATATGTTT",5,36.87,7.62,-3.14,0.26,1.5,1.18,0.02,">1 nonsynonymous","F12T T46G",2
"lib1","SARS-CoV-2","AAAAAGGTCAAGTAAT",2,41.15,10.66,-0.11,0.06,2.93,1,0,">1 nonsynonymous","S147I N151V V173L",3
"lib1","SARS-CoV-2","AAAAAGGTTCCCCTTT",1,14.17,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N30R Y39L S45W G51I K94Q C150G Q168S",7
"lib1","SARS-CoV-2","AAAAAGGTTTTTAACT",7,0.76,NA,NA,NA,NA,NA,NA,"stop","N1* P7V I88S G166S",4
"lib1","SARS-CoV-2","AAAAAGTAAAGATAGT",2,71.28,9.92,-0.84,0.12,2.31,1.03,0.01,">1 nonsynonymous","F44L Q84L",2
"lib1","SARS-CoV-2","AAAAAGTAACGCAAAA",10,179.58,10.75,-0.02,0.05,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAGTAACTAATTA",2,0.79,NA,NA,NA,NA,NA,NA,"stop","L95C S108K E154*",3
"lib1","SARS-CoV-2","AAAAAGTAATATATGT",8,191.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y39W I80R Y178S",3
"lib1","SARS-CoV-2","AAAAAGTACCTAAAAG",11,79.26,8.13,-2.64,0.23,1.5,1.03,0.02,">1 nonsynonymous","F8G A18P Y39S S45L D97N N151M",6
"lib1","SARS-CoV-2","AAAAAGTACTAGAGCA",7,110.12,10.79,0.02,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAAGTACTCAAATT",5,77.11,6.29,-4.47,0.66,1.5,1.28,0.03,">1 nonsynonymous","N40Y Y91G N151L",3
"lib1","SARS-CoV-2","AAAAAGTATACTTCAA",2,20.19,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","P7F G86M S129I V173E",4
"lib1","SARS-CoV-2","AAAAAGTATCCGCCAT",5,33.64,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V103L C150E V173R",3
"lib1","SARS-CoV-2","AAAAAGTCACCACGAC",2,56.27,8.31,-2.46,0.1,1.85,1.08,0,">1 nonsynonymous","P96Y F156L",2
"lib1","SARS-CoV-2","AAAAAGTCTAACATAG",2,26.61,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E76G C150L",2
"lib1","SARS-CoV-2","AAAAAGTCTCAATCGC",2,5.21,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","Y93S N120S P149A",3
"lib1","SARS-CoV-2","AAAAAGTCTCTAATTG",1,19.31,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","AAAAAGTGTAATGATG",5,25.24,6.22,-4.55,0.33,3,1.19,0.01,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","AAAAAGTTAAAAACAG",4,36.56,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","G9P A18K T148N G166P S200M",5
"lib1","SARS-CoV-2","AAAAAGTTAACGGCGA",2,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R F99S",2
"lib1","SARS-CoV-2","AAAAAGTTCCCTCATA",4,28.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G A42E C61R A89V W106R T201Y",6
"lib1","SARS-CoV-2","AAAAAGTTCGACAGCA",1,6.03,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","P82F G117T P197S",3
"lib1","SARS-CoV-2","AAAAAGTTGTTCCCTG",3,39.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S19V F47L N64F R73P",4
"lib1","SARS-CoV-2","AAAAAGTTTAATCCCT",5,11.55,10.51,-0.26,0.08,2.98,1.03,0,"1 nonsynonymous","F185Y",1
"lib1","SARS-CoV-2","AAAAAGTTTAGATTGG",4,1.36,NA,NA,NA,NA,NA,NA,"stop","E135* T201N",2
"lib1","SARS-CoV-2","AAAAAGTTTTCCCAAT",2,23.28,6.25,-4.52,0.87,1.5,1.15,0.05,">1 nonsynonymous","F8C K94T S139V",3
"lib1","SARS-CoV-2","AAAAAGTTTTTGATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Q144* C150R",2
"lib1","SARS-CoV-2","AAAAATAAAAAAGAAA",3,120.08,6.02,-4.75,0.96,1.5,1.21,0.02,">1 nonsynonymous","F99Y E141G P161K",3
"lib1","SARS-CoV-2","AAAAATAAAAATGACA",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Q P54H C102A S139G T201S",5
"lib1","SARS-CoV-2","AAAAATAAAAGTAGCA",2,17.95,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N58I S113L S147P C158V",4
"lib1","SARS-CoV-2","AAAAATAAAATACGTC",3,23.65,9.34,-1.42,0.15,1.7,1.17,0.01,">1 nonsynonymous","P82T N171S",2
"lib1","SARS-CoV-2","AAAAATAAAATTAAAA",5,175.6,10.68,-0.08,0.05,2.87,1.05,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","AAAAATAAACCAGTAG",3,99.83,10.55,-0.21,0.03,2.93,1,0,">1 nonsynonymous","S43Y N58D D90L Y143F",4
"lib1","SARS-CoV-2","AAAAATAAACGTGCTT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","D34R Y121* G152P F167S",4
"lib1","SARS-CoV-2","AAAAATAAACTACCAA",3,61.18,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","S69R N107T",2
"lib1","SARS-CoV-2","AAAAATAAATCCTAAC",11,235.02,10.59,-0.17,0.06,2.89,1.06,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","AAAAATAAATTCCTTG",4,70.39,10.61,-0.15,0.04,2.92,1.01,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","AAAAATAACATTCAAC",8,250.11,9.89,-0.87,0.06,2.78,1.04,0,">1 nonsynonymous","N30R S41V F156R",3
"lib1","SARS-CoV-2","AAAAATAACCAAAAAA",2,54.8,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90G D137M T201C",3
"lib1","SARS-CoV-2","AAAAATAACCCCTTTC",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N T15P D68I A89G",4
"lib1","SARS-CoV-2","AAAAATAACCGATATC",6,192.85,9.58,-1.18,0.13,1.86,1.11,0.01,">1 nonsynonymous","A22F L57S",2
"lib1","SARS-CoV-2","AAAAATAACGAGGACA",1,8.7,10.79,0.02,0.1,2.94,1,0,">1 nonsynonymous","R16I Y50W",2
"lib1","SARS-CoV-2","AAAAATAACTAGAGAG",3,57.28,9.5,-1.26,0.27,1.5,1.05,0.02,">1 nonsynonymous","L5V S41D K56Y Y66I W106I",5
"lib1","SARS-CoV-2","AAAAATAAGCATAAGT",13,172.38,10.56,-0.2,0.03,2.95,1.02,0,"1 nonsynonymous","E10G",1
"lib1","SARS-CoV-2","AAAAATAAGGTTTACG",7,86.43,10.18,-0.58,0.06,2.85,1.01,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","AAAAATAATACGGAGT",3,48.56,10.11,-0.65,0.12,2.46,1.01,0.01,"1 nonsynonymous","P133R",1
"lib1","SARS-CoV-2","AAAAATAATCGCAAAT",3,60.27,7.9,-2.87,0.37,1.5,1,0.05,">1 nonsynonymous","A14W W106F V115G",3
"lib1","SARS-CoV-2","AAAAATAATGCATTCC",1,8.93,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","R25Q Y35P S45L G51S D97T Y121P",6
"lib1","SARS-CoV-2","AAAAATACAAAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* G83E",2
"lib1","SARS-CoV-2","AAAAATACATCACTGG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T L162T",2
"lib1","SARS-CoV-2","AAAAATACATGAGAAC",3,20.77,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","C49A G86S",2
"lib1","SARS-CoV-2","AAAAATACATTAAATA",1,44.81,10.63,-0.14,0.09,2.9,1.06,0.01,">1 nonsynonymous","K128R T140R T201M",3
"lib1","SARS-CoV-2","AAAAATACCTAAGTTC",5,131.04,10.78,0.01,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATACGAAAGATA",2,35.61,10.75,-0.01,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATACGAACAAAT",4,27.47,8.42,-2.35,0.29,1.5,1.07,0.03,">1 nonsynonymous","P96F L188P",2
"lib1","SARS-CoV-2","AAAAATACGGAACATA",2,61.24,10.79,0.02,0.07,2.95,1.03,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","AAAAATACGTCAATAA",1,7.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44L D98R N107K E154Q Q168L",5
"lib1","SARS-CoV-2","AAAAATACTAAGATCA",2,40.28,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D112R K132L",2
"lib1","SARS-CoV-2","AAAAATACTCATAAAA",7,34.98,6.52,-4.24,0.4,1.5,1.19,0.02,">1 nonsynonymous","P82Y T100M",2
"lib1","SARS-CoV-2","AAAAATACTGGAGACG",7,21.84,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I2W N92R I104N",3
"lib1","SARS-CoV-2","AAAAATACTTTGTCCA",6,43.88,6.69,-4.07,0.65,1.5,1.16,0.07,">1 nonsynonymous","K114G Q144H Y165M K199I",4
"lib1","SARS-CoV-2","AAAAATAGAACTACTT",3,101.67,10.75,-0.01,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATAGAATTCTGC",3,115.32,6.14,-4.62,0.81,1.5,1.19,0.01,">1 nonsynonymous","F8L F99S T201G",3
"lib1","SARS-CoV-2","AAAAATAGACTTTAAC",2,65.52,8.02,-2.74,0.17,1.82,1.19,0.01,">1 nonsynonymous","V20A Y39V G166D E186T",4
"lib1","SARS-CoV-2","AAAAATAGCAACTAAC",1,19.25,10.61,-0.15,0.09,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATAGCATAAAGT",5,50.64,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50N A67G G83E I138S",4
"lib1","SARS-CoV-2","AAAAATAGCCCTAGGC",3,9.44,NA,NA,NA,NA,NA,NA,"stop","Y35N Y119* S184M",3
"lib1","SARS-CoV-2","AAAAATAGCTCCGAAA",2,37.28,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14V V20L K128L",3
"lib1","SARS-CoV-2","AAAAATAGGCACGGCC",3,80.26,10.8,0.04,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATAGGGTATTTT",7,83.32,9.35,-1.41,0.15,1.77,1.09,0.01,">1 nonsynonymous","L5M G86A",2
"lib1","SARS-CoV-2","AAAAATAGGTCGTACA",3,52.94,10.05,-0.72,0.14,2.22,1.07,0.01,">1 nonsynonymous","S41L G83S K128I",3
"lib1","SARS-CoV-2","AAAAATAGGTTTATAG",4,53.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y50D Y91L",2
"lib1","SARS-CoV-2","AAAAATAGTATCAGAT",3,103.02,6.02,-4.74,1.07,1.5,1.17,0.02,">1 nonsynonymous","C61N C158F",2
"lib1","SARS-CoV-2","AAAAATAGTCAAATTC",8,111.96,10.45,-0.31,0.04,2.93,1.02,0,">1 nonsynonymous","E10G F44V H189S P197F",4
"lib1","SARS-CoV-2","AAAAATAGTCTTTGGA",2,127.67,9.72,-1.05,0.09,2.74,1.1,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","AAAAATAGTTTCGCCG",16,25.8,8.91,-1.86,0.39,1.5,1,0.08,">1 nonsynonymous","N13V C158Y",2
"lib1","SARS-CoV-2","AAAAATATAAAAACAA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","G9K T55C I104P S184*",4
"lib1","SARS-CoV-2","AAAAATATAAAGCTGA",3,33.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S36R V103F Q144S K198W",4
"lib1","SARS-CoV-2","AAAAATATAACTATTA",3,34.91,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A14V V20H D34I V52K K94E K114T P133Q S147P V153R P177R",10
"lib1","SARS-CoV-2","AAAAATATAATAGACT",1,72.68,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P149Q G166V F167S Y175I",4
"lib1","SARS-CoV-2","AAAAATATACTCTTTT",4,32.7,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","S19Q N92G P169L L188H T201M",5
"lib1","SARS-CoV-2","AAAAATATAGTAGAAT",3,21.03,10.17,-0.6,0.12,2.67,1,0,">1 nonsynonymous","S41G L125M E154V",3
"lib1","SARS-CoV-2","AAAAATATAGTCGCGT",1,29.61,6.63,-4.13,0.35,1.5,1.04,0.01,">1 nonsynonymous","E141P P149R V173L R179Y",4
"lib1","SARS-CoV-2","AAAAATATATAAATAA",3,5.55,9.87,-0.89,0.34,1.5,1.04,0.06,">1 nonsynonymous","L38E C49K K87N F99H Y123R F160P",6
"lib1","SARS-CoV-2","AAAAATATATTTCGGC",5,1.02,NA,NA,NA,NA,NA,NA,"stop","P82* D112L C195G",3
"lib1","SARS-CoV-2","AAAAATATATTTGCGT",5,176.38,10.43,-0.33,0.04,2.83,1.06,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","AAAAATATCCCAGAGT",1,46.41,10.78,0.01,0.1,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAATATCTTTCTCT",1,47.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8Q G86F",2
"lib1","SARS-CoV-2","AAAAATATGAGGAATG",1,5.9,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","G9S N13K R25I R179M",4
"lib1","SARS-CoV-2","AAAAATATGGTGGATT",4,38.81,9.6,-1.17,0.06,2.83,1.04,0,">1 nonsynonymous","E141K T170F V194A",3
"lib1","SARS-CoV-2","AAAAATATGTGCAGGA",3,58.57,10.61,-0.15,0.06,2.91,1.03,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","AAAAATATTAAAACCG",4,19.65,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","Q84P I88G G152S",3
"lib1","SARS-CoV-2","AAAAATATTGAATTGG",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S G196M",2
"lib1","SARS-CoV-2","AAAAATCAAAAAAACC",1,22.96,8.48,-2.28,0.15,1.54,1.08,0.01,">1 nonsynonymous","W23S T140F",2
"lib1","SARS-CoV-2","AAAAATCAAAAACAAC",4,81.47,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15C Y39V Y93I Y119N",4
"lib1","SARS-CoV-2","AAAAATCAACGTGCCG",2,25.12,9.24,-1.52,0.19,1.75,1.05,0.02,">1 nonsynonymous","F12C P149M",2
"lib1","SARS-CoV-2","AAAAATCACGGATTTA",4,134.1,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37T T100R L111T S139V C158T S164L",6
"lib1","SARS-CoV-2","AAAAATCACTAGGGAG",5,22.74,6.69,-4.08,0.56,1.5,1.15,0.04,">1 nonsynonymous","N1G F8V S53Y S69I K94L F167K",6
"lib1","SARS-CoV-2","AAAAATCACTTTTCAG",8,11.21,9.32,-1.45,0.48,1.5,1.03,0.07,">1 nonsynonymous","P7T N13L R136N",3
"lib1","SARS-CoV-2","AAAAATCATACAACAA",1,46.14,10.72,-0.05,0.07,3,1,0,"1 nonsynonymous","S29F",1
"lib1","SARS-CoV-2","AAAAATCATACGCGAC",4,1551.97,10.76,-0.01,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATCATCTGCGTA",2,5.44,8.03,-2.73,0.35,1.5,1.24,0.04,">1 nonsynonymous","C6Y D97F V173G",3
"lib1","SARS-CoV-2","AAAAATCATGCACAAT",4,69.48,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W23M V37R Y91G G146T",4
"lib1","SARS-CoV-2","AAAAATCATTATAGCA",8,34.32,7.09,-3.68,0.27,1.5,1.12,0.01,">1 nonsynonymous","T15G I80N T100C",3
"lib1","SARS-CoV-2","AAAAATCATTTGTATG",1,5.27,10.07,-0.69,0.3,2.77,1,0.01,">1 nonsynonymous","N64S D90V",2
"lib1","SARS-CoV-2","AAAAATCCAATGATTT",11,181.93,10.7,-0.06,0.05,2.95,1.03,0,">1 nonsynonymous","Y35W K132C G196F",3
"lib1","SARS-CoV-2","AAAAATCCACAAAAAG",1,30.59,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N30H N92V",2
"lib1","SARS-CoV-2","AAAAATCCGGAAAGTG",2,27.46,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y35I P82S V115W L162S",4
"lib1","SARS-CoV-2","AAAAATCCGTACGTTA",2,41.65,10.59,-0.17,0.09,2.87,1.07,0,">1 nonsynonymous","S41C L60M P149G",3
"lib1","SARS-CoV-2","AAAAATCCTTTCCGTA",1,35.29,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","T15S Y21R G152S P177E",4
"lib1","SARS-CoV-2","AAAAATCGAAACGCCG",3,79.03,9.68,-1.09,0.08,2.32,1.04,0,">1 nonsynonymous","C6D F47Y",2
"lib1","SARS-CoV-2","AAAAATCGAGGGAGAC",2,0.23,NA,NA,NA,NA,NA,NA,"stop","L183*",1
"lib1","SARS-CoV-2","AAAAATCGATGGTTGG",1,33.34,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8G D59L E141S Y175E",4
"lib1","SARS-CoV-2","AAAAATCGCTAGATAC",10,66.96,10.72,-0.05,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATCGCTATTTAA",4,24.07,10.7,-0.06,0.09,2.84,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATCTCATCCCAG",2,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G S41F F99T",3
"lib1","SARS-CoV-2","AAAAATCTCTCAACTA",7,94.88,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N64L T85F D90I P177R",4
"lib1","SARS-CoV-2","AAAAATCTGAAGGAGG",5,49.02,10.84,0.07,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATCTGAATAAGT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","K87* D137R",2
"lib1","SARS-CoV-2","AAAAATCTGTACTGAT",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N I138M",2
"lib1","SARS-CoV-2","AAAAATCTTAAGCGTA",11,1.18,NA,NA,NA,NA,NA,NA,"stop","S29* T55F Q84Y G116*",4
"lib1","SARS-CoV-2","AAAAATCTTACGTACT",6,115.09,10.68,-0.08,0.08,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATCTTATGAAGC",4,60.31,9.69,-1.07,0.13,1.83,1.12,0.01,">1 nonsynonymous","N13V V32R S129G",3
"lib1","SARS-CoV-2","AAAAATCTTCGTTACA",6,155.08,10.53,-0.23,0.03,2.88,1.05,0,">1 nonsynonymous","D97N T100I N120I",3
"lib1","SARS-CoV-2","AAAAATGAAACATGGG",6,48.78,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V65S P82A Y93P N118L",4
"lib1","SARS-CoV-2","AAAAATGAAAGAATAT",3,104.71,8.57,-2.2,0.2,1.5,1.08,0.01,">1 nonsynonymous","R16Y A89H Q144P",3
"lib1","SARS-CoV-2","AAAAATGAAATAGCAT",14,153.43,10.64,-0.12,0.04,2.87,1.06,0,">1 nonsynonymous","T3R D90S S164A",3
"lib1","SARS-CoV-2","AAAAATGAACATTAAA",4,10.14,6.02,-4.75,0.9,3,1.1,0.01,">1 nonsynonymous","T3V T55V A89L T100S Y165L",5
"lib1","SARS-CoV-2","AAAAATGAAGCCCAAA",2,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y E135L G155K Y178L",4
"lib1","SARS-CoV-2","AAAAATGAATGACGCC",3,66.8,10.79,0.02,0.08,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATGACACACAAA",9,141.53,10.73,-0.04,0.05,2.9,1.07,0,">1 nonsynonymous","P54V T63K",2
"lib1","SARS-CoV-2","AAAAATGACAGCAGGG",2,2.47,NA,NA,NA,NA,NA,NA,"stop","L38W F44T C102* L122Y",4
"lib1","SARS-CoV-2","AAAAATGACAGTTTAA",15,84.42,6,-4.76,2,1.78,1.14,0,">1 nonsynonymous","C6M K56L K114D C150P",4
"lib1","SARS-CoV-2","AAAAATGACATAACAA",3,37.62,10.29,-0.47,0.07,2.68,1.09,0,">1 nonsynonymous","P96T K199V",2
"lib1","SARS-CoV-2","AAAAATGAGAGTTCCA",2,8.93,6,-4.76,2,3,1.08,0,">1 nonsynonymous","A14T N107T D137L",3
"lib1","SARS-CoV-2","AAAAATGAGCAGACAT",4,39.73,10.87,0.1,0.07,2.86,1.11,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","AAAAATGATAGAAGGT",5,14.12,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F62S F99K Q144M",3
"lib1","SARS-CoV-2","AAAAATGATAGTTGAC",7,70.48,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C49N P177F",2
"lib1","SARS-CoV-2","AAAAATGATCCAAGGC",5,54.57,10.57,-0.19,0.06,2.94,1.02,0,"1 nonsynonymous","D59F",1
"lib1","SARS-CoV-2","AAAAATGATCCAGCGA",6,64.25,10.67,-0.1,0.06,2.85,1.07,0,">1 nonsynonymous","I2F P96N P197A",3
"lib1","SARS-CoV-2","AAAAATGATGGGAAAC",5,108.34,10.67,-0.09,0.05,2.94,1.01,0,">1 nonsynonymous","I2S G116S",2
"lib1","SARS-CoV-2","AAAAATGATGGTAGCT",4,57.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q S45K T55L",3
"lib1","SARS-CoV-2","AAAAATGCATTTACCT",5,174.07,10.11,-0.66,0.03,2.89,1.02,0,"1 nonsynonymous","L125S",1
"lib1","SARS-CoV-2","AAAAATGCGATGGTGA",2,4.14,NA,NA,NA,NA,NA,NA,"stop","N1M S36M G86K D98L Y119* K128M",6
"lib1","SARS-CoV-2","AAAAATGCGATTGACT",9,85.36,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V52L G86N Y119I",3
"lib1","SARS-CoV-2","AAAAATGCTAAACTAA",13,289.09,10.17,-0.59,0.05,2.88,1,0,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","AAAAATGCTACTTAAA",4,26.22,9.5,-1.27,0.14,2.34,1.18,0.01,">1 nonsynonymous","G116Q L125I Q144Y",3
"lib1","SARS-CoV-2","AAAAATGCTTGAGAGT",3,40.72,7.21,-3.56,0.28,1.5,1.13,0.02,">1 nonsynonymous","D34G G117F",2
"lib1","SARS-CoV-2","AAAAATGCTTGATACC",3,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102T R127K P133S",3
"lib1","SARS-CoV-2","AAAAATGGAACGATAC",1,119.24,6.03,-4.73,0.78,1.5,1.18,0.01,">1 nonsynonymous","Y119D N130Q P149L Q176L",4
"lib1","SARS-CoV-2","AAAAATGGAGTTTATT",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L60G P82S V182S",4
"lib1","SARS-CoV-2","AAAAATGGGCAAATAA",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K F99V",2
"lib1","SARS-CoV-2","AAAAATGGTGTTGTAT",2,5.13,10.08,-0.68,0.13,2.6,1,0.01,">1 nonsynonymous","V11L F47L T85A K128R",4
"lib1","SARS-CoV-2","AAAAATGTAACAATAA",3,31.02,9.73,-1.04,0.1,2.31,1.02,0,">1 nonsynonymous","Y21I Q84S",2
"lib1","SARS-CoV-2","AAAAATGTAATAATTT",4,133.17,7.23,-3.54,0.16,1.5,1.16,0.01,">1 nonsynonymous","Y91L Y119M Q168K",3
"lib1","SARS-CoV-2","AAAAATGTATAACCTA",2,6.17,8.66,-2.11,0.1,2.97,1,0.01,">1 nonsynonymous","T100K T140L G155P",3
"lib1","SARS-CoV-2","AAAAATGTATTATTCT",1,36.17,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68V Q176W",2
"lib1","SARS-CoV-2","AAAAATGTATTCGCCG",1,33.46,10.7,-0.07,0.08,2.97,1.01,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","AAAAATGTCACATCCA",8,39.61,6.05,-4.71,0.93,1.5,1.17,0.02,">1 nonsynonymous","G83D W106Q P133L G152M S164I V180F",6
"lib1","SARS-CoV-2","AAAAATGTCTACCATT",2,28.49,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N1H V37K L57N G101S",4
"lib1","SARS-CoV-2","AAAAATGTCTCCCAAA",2,89.98,9.37,-1.4,0.06,2.85,1.05,0,">1 nonsynonymous","Y119F Q144V",2
"lib1","SARS-CoV-2","AAAAATGTGAACAAAC",1,23.58,8.61,-2.16,0.27,1.5,1.06,0.02,">1 nonsynonymous","C6M N107G",2
"lib1","SARS-CoV-2","AAAAATGTGATTAAGC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","C31E C61* A105S E154H S200A",5
"lib1","SARS-CoV-2","AAAAATGTTGGCATTG",5,33.01,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","T63D Y143P P161R F185L T201G",5
"lib1","SARS-CoV-2","AAAAATGTTTAATGAA",4,57.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P7A P161Y A192E",3
"lib1","SARS-CoV-2","AAAAATTAACAATGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","I2V G9* S129G S200P",4
"lib1","SARS-CoV-2","AAAAATTAACCAACTA",1,10.86,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P7N A14D N64E P82R P149D",5
"lib1","SARS-CoV-2","AAAAATTAACTTCCAA",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R K26F Y35W T85D V173G",5
"lib1","SARS-CoV-2","AAAAATTAAGTCCTAG",2,48.55,9.81,-0.96,0.06,2.78,1.07,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","AAAAATTAATCCGAGG",2,24.02,9.28,-1.48,0.16,1.64,1.12,0.02,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","AAAAATTAATTCTCTC",11,255.46,7.21,-3.55,0.32,1.5,1.12,0.03,">1 nonsynonymous","L38S T100K Y178I",3
"lib1","SARS-CoV-2","AAAAATTAATTCTTCT",1,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K I72S E76F",3
"lib1","SARS-CoV-2","AAAAATTACGGTCTAG",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D V71L G117N",3
"lib1","SARS-CoV-2","AAAAATTAGACTGACT",2,81.51,10.71,-0.06,0.06,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAATTAGAGTCAAA",2,24.23,7.32,-3.45,0.28,1.5,1.06,0.02,">1 nonsynonymous","I88Y V173Y",2
"lib1","SARS-CoV-2","AAAAATTAGGTTAAAC",2,5.03,8.77,-2,0.52,1.5,1.05,0.05,">1 nonsynonymous","D34W D97N R136L",3
"lib1","SARS-CoV-2","AAAAATTATAAGAACT",4,33.88,10.64,-0.13,0.05,2.89,1,0,">1 nonsynonymous","L5W S139A K199M",3
"lib1","SARS-CoV-2","AAAAATTATAGAAAAA",9,34.49,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","I2Y A105S C150S L162V",4
"lib1","SARS-CoV-2","AAAAATTATAGTACTC",7,55.23,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A81M N92R T140C",3
"lib1","SARS-CoV-2","AAAAATTATCTATATC",2,46.38,10.28,-0.48,0.05,2.74,1.05,0,">1 nonsynonymous","F44S L122A P169T K199N",4
"lib1","SARS-CoV-2","AAAAATTATCTGCTGT",4,9.34,6,-4.76,2,3,1.31,0.02,">1 nonsynonymous","C61V C102G T170L P197A",4
"lib1","SARS-CoV-2","AAAAATTCAAAATACC",2,13.58,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","R25L F47G A89S D97S N130M T170A",6
"lib1","SARS-CoV-2","AAAAATTCAAACATAG",1,47,8.8,-1.96,0.13,2.67,1.09,0.01,">1 nonsynonymous","P169E Q176N",2
"lib1","SARS-CoV-2","AAAAATTCACCCACAC",1,5.42,6,-4.76,1.41,3,1,0,">1 nonsynonymous","N4I R16T D34T F62D P96Y K128R P149R",7
"lib1","SARS-CoV-2","AAAAATTCCACAAGCA",11,71.22,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D97P S139N G146V F167L G174T",5
"lib1","SARS-CoV-2","AAAAATTCGCGAAAGC",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V K87C P133F P191C",4
"lib1","SARS-CoV-2","AAAAATTCGTTTGATA",4,100.94,10.68,-0.08,0.05,2.94,1.02,0,">1 nonsynonymous","S147I N171I",2
"lib1","SARS-CoV-2","AAAAATTCTTACAGTA",3,25.33,6.65,-4.12,0.22,1.5,1.08,0.01,">1 nonsynonymous","C6W A14V Y21A D59V",4
"lib1","SARS-CoV-2","AAAAATTGAACGGAGC",9,25.57,6,-4.76,1.24,1.5,1.09,0.01,">1 nonsynonymous","N40I N64K G74S T85I N107H Y178R",6
"lib1","SARS-CoV-2","AAAAATTGCGCTGTAG",1,15.88,6,-4.76,2,3,1.23,0.04,">1 nonsynonymous","Y91V D98E N107L K128I",4
"lib1","SARS-CoV-2","AAAAATTGCGGGGTGG",7,65.27,10.7,-0.07,0.07,2.98,1,0,">1 nonsynonymous","N109R T148I",2
"lib1","SARS-CoV-2","AAAAATTGGATGAAGG",1,22.67,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I88M G101R N107G",3
"lib1","SARS-CoV-2","AAAAATTGGCTCTCAT",8,17.33,9.49,-1.27,0.48,1.5,1.02,0.06,">1 nonsynonymous","N109V L183E T201N",3
"lib1","SARS-CoV-2","AAAAATTGTAAAAACT",2,21.8,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14L W23V C31A W106E G146E",5
"lib1","SARS-CoV-2","AAAAATTGTACATGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I Y50W I72W G83R S113Q",5
"lib1","SARS-CoV-2","AAAAATTGTTGATATC",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43N A89W P96W",3
"lib1","SARS-CoV-2","AAAAATTTAAGAACAC",4,9.68,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","W23V W106D G116P Q168Y",4
"lib1","SARS-CoV-2","AAAAATTTAGGTGGGT",2,6.53,10.68,-0.08,0.17,2.93,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATTTATAATTAG",1,35.99,10.15,-0.61,0.06,2.87,1.04,0,">1 nonsynonymous","D90C K114F",2
"lib1","SARS-CoV-2","AAAAATTTCGAATATA",3,21.3,10.79,0.02,0.1,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAATTTGACGATAA",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Y G86M V103G S147I",4
"lib1","SARS-CoV-2","AAAAATTTGCTGAATT",3,0,NA,NA,NA,NA,NA,NA,"stop","G9L G155*",2
"lib1","SARS-CoV-2","AAAAATTTGCTTCAAA",6,41.34,8.69,-2.08,0.17,2.2,1.14,0.01,">1 nonsynonymous","S113M E141V T201R",3
"lib1","SARS-CoV-2","AAAAATTTGTGAGCGG",8,3.38,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","AAAAATTTTATTTCAC",7,105.86,10.74,-0.03,0.05,2.9,1.04,0,">1 nonsynonymous","V77L V153I",2
"lib1","SARS-CoV-2","AAAAATTTTCTTCCCA",5,56.85,10.67,-0.09,0.04,2.95,1.03,0,"1 nonsynonymous","N4V",1
"lib1","SARS-CoV-2","AAAAATTTTTTGTCAG",3,75.9,10.18,-0.59,0.06,2.9,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","AAAACAAAAATAGGAG",3,75.19,6.41,-4.36,0.5,1.5,1.1,0.02,">1 nonsynonymous","I28H L60I F134S F167W",4
"lib1","SARS-CoV-2","AAAACAAAACAAAATA",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70T L95A C150E R179T E186I",5
"lib1","SARS-CoV-2","AAAACAAAATGTAATT",2,71.73,10.68,-0.08,0.11,2.89,1.03,0,"1 nonsynonymous","Y66N",1
"lib1","SARS-CoV-2","AAAACAAAATGTACAG",4,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V E76N A81V",3
"lib1","SARS-CoV-2","AAAACAAAATGTTATA",1,25.54,10.12,-0.64,0.11,2.75,1,0.01,">1 nonsynonymous","F44S E141I T201M",3
"lib1","SARS-CoV-2","AAAACAAACAATTATC",1,67.29,10.74,-0.03,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACAAACAGATCCT",11,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V115E P133R G146T",3
"lib1","SARS-CoV-2","AAAACAAACCGCAATC",2,28.79,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","N1Y P7H W23T V52T G86S K94P",6
"lib1","SARS-CoV-2","AAAACAAACCTACATT",1,59.12,6.01,-4.76,0.75,1.5,1.2,0.01,">1 nonsynonymous","A18Y V37R C61Y V77P",4
"lib1","SARS-CoV-2","AAAACAAACGCAATTA",10,77.18,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G51V Y93Q Y143C",3
"lib1","SARS-CoV-2","AAAACAAACGCTGCTA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","P7Y D59Y I80* A105T",4
"lib1","SARS-CoV-2","AAAACAAAGTAAAAGG",5,16.09,8.48,-2.29,0.22,1.5,1.04,0.02,">1 nonsynonymous","F8K S19N",2
"lib1","SARS-CoV-2","AAAACAAATACACCTA",9,84.26,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","K56S G101P N120H",3
"lib1","SARS-CoV-2","AAAACAAATATGCCCT",3,47.93,6.03,-4.74,0.93,1.5,1.1,0.02,">1 nonsynonymous","G9S Y39V C49F F167V",4
"lib1","SARS-CoV-2","AAAACAAATGAACAAA",4,49.98,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N58T K94N A145L P149I",4
"lib1","SARS-CoV-2","AAAACAAATGATAACC",4,18.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A105K Y119K P177V",3
"lib1","SARS-CoV-2","AAAACAAATGCCAACA",1,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","AAAACAACAATCTTAT",7,77.18,9.86,-0.91,0.14,1.75,1.12,0.01,">1 nonsynonymous","I2V N30V S45N",3
"lib1","SARS-CoV-2","AAAACAACAATTTAAA",7,68.56,6.87,-3.89,0.36,1.5,1.08,0.02,">1 nonsynonymous","N58L A89K",2
"lib1","SARS-CoV-2","AAAACAACACGATATT",2,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106C G146W P161I",3
"lib1","SARS-CoV-2","AAAACAACCCCGCTCA",7,61.38,10.32,-0.45,0.05,2.91,1,0,">1 nonsynonymous","N1S Y35V G155R K199Y",4
"lib1","SARS-CoV-2","AAAACAACCCGTACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","F99* W106E T201H",3
"lib1","SARS-CoV-2","AAAACAACCTTGATAA",2,38.66,8.46,-2.31,0.4,1.86,1.24,0.05,">1 nonsynonymous","T46K Q84C F126T",3
"lib1","SARS-CoV-2","AAAACAACGACCTAAT",1,14.19,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C61S K87N N92K A105N K114E L122K",6
"lib1","SARS-CoV-2","AAAACAACGCACCCTA",1,56.11,10.74,-0.02,0.04,2.92,1.05,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","AAAACAACGCTTATCA",8,45.61,6.59,-4.18,0.51,1.5,1.08,0.03,">1 nonsynonymous","C6I D68W",2
"lib1","SARS-CoV-2","AAAACAACGGAACTAT",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88T V103R R136V P197L",4
"lib1","SARS-CoV-2","AAAACAACGGTATTCA",8,35.95,6.46,-4.3,0.79,1.5,1.27,0.05,">1 nonsynonymous","P54L A67L D90P T201M",4
"lib1","SARS-CoV-2","AAAACAACTAATTATC",10,143.9,10.69,-0.08,0.05,2.9,1.04,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","AAAACAACTATACGAA",4,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S C195F",2
"lib1","SARS-CoV-2","AAAACAACTCAGACCA",1,50.06,10.87,0.11,0.08,2.9,1.06,0,"1 nonsynonymous","V153N",1
"lib1","SARS-CoV-2","AAAACAACTGATCAAG",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R Y121V S139V",3
"lib1","SARS-CoV-2","AAAACAACTGCGAGGT",6,21.77,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D68M V103R",2
"lib1","SARS-CoV-2","AAAACAACTTTAACAT",4,140.95,10.46,-0.3,0.04,2.87,1.04,0,">1 nonsynonymous","S45G Q144N V173R",3
"lib1","SARS-CoV-2","AAAACAAGACTGTACT",2,47.53,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G9W D90Y K128F N157P",4
"lib1","SARS-CoV-2","AAAACAAGCCGAATTT",1,21.68,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9H G83F C150L Q176K",4
"lib1","SARS-CoV-2","AAAACAAGCTAAAACA",1,10.48,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V103T D112K N151A",3
"lib1","SARS-CoV-2","AAAACAAGGAGAATCA",3,2.76,NA,NA,NA,NA,NA,NA,"stop","N1C V115E N151* P161G G174T T201V",6
"lib1","SARS-CoV-2","AAAACAAGGTATCCTT",7,175.9,7.54,-3.22,0.1,1.5,1.1,0,">1 nonsynonymous","N4Y S41H Y175E",3
"lib1","SARS-CoV-2","AAAACAAGGTGAACTT",3,39.4,10.08,-0.69,0.06,2.82,1.05,0,">1 nonsynonymous","N4S A14Q G155C",3
"lib1","SARS-CoV-2","AAAACAAGTGTAACTG",2,0.19,NA,NA,NA,NA,NA,NA,"stop","N30* W106S",2
"lib1","SARS-CoV-2","AAAACAAGTTACCCAA",8,38.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y93A T100V I104A Y123K K199I",5
"lib1","SARS-CoV-2","AAAACAATAAACAAGG",3,15.83,8.5,-2.27,0.19,2.03,1.11,0.01,">1 nonsynonymous","D97Y G146Y G152S",3
"lib1","SARS-CoV-2","AAAACAATAAGCAAAA",1,17.48,6,-4.76,2,3,1.14,0,">1 nonsynonymous","K48M N107T G174W",3
"lib1","SARS-CoV-2","AAAACAATATAAGAAA",13,3.41,NA,NA,NA,NA,NA,NA,"stop","L5* F12H I104Y",3
"lib1","SARS-CoV-2","AAAACAATGCATAACA",1,33.68,7.86,-2.9,0.27,1.5,1.02,0.03,">1 nonsynonymous","G83C Y165T",2
"lib1","SARS-CoV-2","AAAACAATGCCTATCA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","R25* S41E F99K",3
"lib1","SARS-CoV-2","AAAACAATGCGAACCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","AAAACAATGTAGTGAT",11,198.93,10.77,0,0.05,2.94,1.02,0,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","AAAACAATTACACCTA",2,48.54,8.32,-2.44,0.13,2.67,1.1,0.01,">1 nonsynonymous","P149T Y175C",2
"lib1","SARS-CoV-2","AAAACAATTCAAACCT",1,60.8,9.82,-0.94,0.06,2.72,1.02,0,">1 nonsynonymous","L95M G116V",2
"lib1","SARS-CoV-2","AAAACAATTGGCACAA",1,46.67,6,-4.76,1.28,1.5,1.14,0.01,">1 nonsynonymous","N4Y L60I N157R Y165I S184T",5
"lib1","SARS-CoV-2","AAAACACACGGCGCCT",3,6.91,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","G9V A18V R25L A42G I80T Q176L",6
"lib1","SARS-CoV-2","AAAACACAGAATATTC",1,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A C49L L95V",3
"lib1","SARS-CoV-2","AAAACACATACTTACA",4,0,NA,NA,NA,NA,NA,NA,"stop","I2H K87* D98V E154K",4
"lib1","SARS-CoV-2","AAAACACATCCATAAG",1,62.65,9,-1.76,0.23,1.5,1.19,0.02,"1 nonsynonymous","S19V",1
"lib1","SARS-CoV-2","AAAACACATGGCGCAA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q P169W",2
"lib1","SARS-CoV-2","AAAACACCAAATTCCG",25,189.94,6.16,-4.6,0.64,1.5,1.19,0.01,">1 nonsynonymous","N58S R127W",2
"lib1","SARS-CoV-2","AAAACACCATGACACC",3,62.54,10.79,0.03,0.09,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACACCATTTCGAA",3,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98I V173G L183T",3
"lib1","SARS-CoV-2","AAAACACCCGACCCCA",2,50.44,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P7T L60N C158P",3
"lib1","SARS-CoV-2","AAAACACCCTTTTGTG",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E F70E T148K V153K N157S",5
"lib1","SARS-CoV-2","AAAACACGAAAACAGT",2,20.89,7.53,-3.24,0.33,1.5,1,0.04,">1 nonsynonymous","C6W D59V K114P",3
"lib1","SARS-CoV-2","AAAACACGAAAATTCA",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L C61M K94G G152N",4
"lib1","SARS-CoV-2","AAAACACGAACCCAAA",7,199.6,8.92,-1.85,0.07,2.8,1.09,0,"1 nonsynonymous","T170V",1
"lib1","SARS-CoV-2","AAAACACGGACCGTCT",3,56.21,10.63,-0.13,0.07,2.96,1,0,"1 nonsynonymous","E141M",1
"lib1","SARS-CoV-2","AAAACACGGTCCCGAC",2,83.72,10.68,-0.09,0.06,2.96,1.03,0,"1 nonsynonymous","P54G",1
"lib1","SARS-CoV-2","AAAACACGTCCGGTGT",1,23.85,9.52,-1.25,0.08,2.66,1.02,0,">1 nonsynonymous","D97E N107E",2
"lib1","SARS-CoV-2","AAAACACGTTCAATGG",8,33.96,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F70H V173C",2
"lib1","SARS-CoV-2","AAAACACTAAACATTA",4,56.03,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F12N G101R I104S",3
"lib1","SARS-CoV-2","AAAACACTAAGATGTT",4,95.89,10.51,-0.25,0.03,2.91,1.08,0,"1 nonsynonymous","R78E",1
"lib1","SARS-CoV-2","AAAACACTCAACCTAA",2,29.67,10.7,-0.06,0.04,2.88,1.05,0,"1 nonsynonymous","E141F",1
"lib1","SARS-CoV-2","AAAACACTGACTTATG",11,99.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11P V52T N64F Y91S G117D G152Y",6
"lib1","SARS-CoV-2","AAAACACTGGGACCTG",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L D75P D137I",3
"lib1","SARS-CoV-2","AAAACACTTAATGAAC",1,8.46,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","E10Y S41F Y91N A105G",4
"lib1","SARS-CoV-2","AAAACACTTACAGCAC",3,30.18,6,-4.76,1.66,1.5,1.25,0.02,">1 nonsynonymous","L57K N118I Y143N C195L",4
"lib1","SARS-CoV-2","AAAACACTTGCAAATT",3,1.2,NA,NA,NA,NA,NA,NA,"stop","T3S V11I G86Y D98G T148N K199*",6
"lib1","SARS-CoV-2","AAAACAGAAAGAAAAT",1,7.96,9.36,-1.41,0.3,1.75,1.17,0.02,"1 nonsynonymous","A105N",1
"lib1","SARS-CoV-2","AAAACAGAAGGGAGAT",2,24.79,6.8,-3.96,0.32,1.5,1.08,0.03,">1 nonsynonymous","F70I D112L N171L",3
"lib1","SARS-CoV-2","AAAACAGACAGTACTT",7,23.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I72E W106H G146E",3
"lib1","SARS-CoV-2","AAAACAGACGACCATA",2,36.41,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","N13Q D90H F134P V173K T201Y",5
"lib1","SARS-CoV-2","AAAACAGAGCTGAAAG",5,39.86,10.68,-0.08,0.04,2.92,1,0,">1 nonsynonymous","S43C D97T",2
"lib1","SARS-CoV-2","AAAACAGATCAATTAT",2,0.67,NA,NA,NA,NA,NA,NA,"stop","Y35T L57* N64G T85Q I138T G155*",6
"lib1","SARS-CoV-2","AAAACAGCACCATCCG",2,0.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","AAAACAGCCAGGAACA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","E10G C49S G83R G166*",4
"lib1","SARS-CoV-2","AAAACAGCCTAGGACG",1,61.03,10.6,-0.16,0.05,2.86,1.09,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","AAAACAGCCTCTTATA",7,133.14,10.35,-0.41,0.05,2.84,1.06,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","AAAACAGCTGAAACTG",2,42.06,10.78,0.01,0.12,2.84,1.12,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","AAAACAGCTGTCACGT",2,8.59,9.23,-1.54,0.31,2.5,1.01,0.02,">1 nonsynonymous","N13A C61T D98Q K114L",4
"lib1","SARS-CoV-2","AAAACAGGAAATTTAG",2,13.35,9.71,-1.06,0.22,2.81,1.08,0.03,">1 nonsynonymous","N4Q C61N Y119K",3
"lib1","SARS-CoV-2","AAAACAGGAATATTAG",6,13.7,NA,NA,NA,NA,NA,NA,"stop","N24* N120W R127N R179E",4
"lib1","SARS-CoV-2","AAAACAGGGGTTCGTC",2,89.22,10.61,-0.15,0.07,2.87,1.12,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","AAAACAGTAAGAAACT",1,35.88,6,-4.76,1.34,1.5,1.2,0.03,">1 nonsynonymous","N107L L122P",2
"lib1","SARS-CoV-2","AAAACAGTACAAGATT",2,68.66,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Q84L W106N P149H",3
"lib1","SARS-CoV-2","AAAACAGTACCTTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N Q163L",2
"lib1","SARS-CoV-2","AAAACAGTCCACCAAT",2,53.44,9.67,-1.09,0.06,2.83,1.05,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","AAAACAGTCCTTAACG",5,1.1,NA,NA,NA,NA,NA,NA,"stop","K48L A105T G146* C195G",4
"lib1","SARS-CoV-2","AAAACAGTGCAAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49* P133K P177V",3
"lib1","SARS-CoV-2","AAAACATAAAAAGTAG",2,35.14,6.04,-4.72,1.48,1.5,1.18,0.05,">1 nonsynonymous","A18M G86V",2
"lib1","SARS-CoV-2","AAAACATAAAATGCTG",1,11.2,8.45,-2.31,0.31,1.85,1.24,0.04,">1 nonsynonymous","A81F G116M",2
"lib1","SARS-CoV-2","AAAACATAAACGCTAG",4,38.18,6.69,-4.08,0.51,1.5,1.19,0.03,">1 nonsynonymous","W23R K87P",2
"lib1","SARS-CoV-2","AAAACATAAATATGTG",1,6.54,10.29,-0.48,0.43,2.17,1,0.08,">1 nonsynonymous","T15P L131T",2
"lib1","SARS-CoV-2","AAAACATAACCAGCAT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R R124V",2
"lib1","SARS-CoV-2","AAAACATAACGCCCAT",2,75.52,10.29,-0.47,0.05,2.9,1.03,0,">1 nonsynonymous","D34Q T201I",2
"lib1","SARS-CoV-2","AAAACATAAGCGCAAA",1,5.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49L G166I",2
"lib1","SARS-CoV-2","AAAACATAAGTGAAAA",2,16.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3I V11L Y50S I104C S184Q",5
"lib1","SARS-CoV-2","AAAACATAATATAAAT",3,37.67,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V77Q K87N R127M D137L",4
"lib1","SARS-CoV-2","AAAACATACACCCAAG",11,89.72,10.61,-0.15,0.06,2.93,1,0,"1 nonsynonymous","T100E",1
"lib1","SARS-CoV-2","AAAACATACAGACACG",3,110.42,10.69,-0.08,0.05,2.93,1.03,0,"1 nonsynonymous","S184C",1
"lib1","SARS-CoV-2","AAAACATACATTAAGC",5,264.75,10.79,0.02,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACATACCACTTAA",7,1.38,NA,NA,NA,NA,NA,NA,"stop","Y50S N120K P161S G166*",4
"lib1","SARS-CoV-2","AAAACATATAATTCCG",6,152.76,10.78,0.02,0.07,2.91,1.05,0,"1 nonsynonymous","P197N",1
"lib1","SARS-CoV-2","AAAACATATCACTATG",2,13.42,7.65,-3.11,0.4,1.5,1.05,0.06,">1 nonsynonymous","K87N Y93V D112R",3
"lib1","SARS-CoV-2","AAAACATATCACTGCG",1,71.97,10.03,-0.73,0.14,2.41,1.1,0.01,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","AAAACATATCTCTCAT",1,10.08,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","L5H Q84L F99R L162D",4
"lib1","SARS-CoV-2","AAAACATATGAAATTT",3,11.07,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V103P F156S",2
"lib1","SARS-CoV-2","AAAACATATTACGAAG",2,42.95,9.84,-0.93,0.16,2.27,1.06,0.01,">1 nonsynonymous","G51F F156A",2
"lib1","SARS-CoV-2","AAAACATCCAAAACTA",6,59.88,9.99,-0.77,0.09,2.04,1.07,0,">1 nonsynonymous","F99H H189P",2
"lib1","SARS-CoV-2","AAAACATCCTCTAAAG",2,0.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137V",1
"lib1","SARS-CoV-2","AAAACATCGTAAACCC",4,27.85,10.2,-0.57,0.07,2.72,1.13,0,">1 nonsynonymous","N4R S45M K128P",3
"lib1","SARS-CoV-2","AAAACATCGTTACTAA",3,17.65,6.22,-4.55,1.15,1.5,1.22,0.04,">1 nonsynonymous","A18L G83K L95K R124M",4
"lib1","SARS-CoV-2","AAAACATCTAATGGGC",2,61.46,10.26,-0.51,0.06,2.85,1,0,">1 nonsynonymous","S41M Q84R N120F",3
"lib1","SARS-CoV-2","AAAACATGAGTAGAAT",5,26.93,9.4,-1.37,0.15,1.5,1.1,0.03,">1 nonsynonymous","N13P Y21F C195L",3
"lib1","SARS-CoV-2","AAAACATGCAGAATCT",4,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W T85M C158T",3
"lib1","SARS-CoV-2","AAAACATGCCGCTGAG",7,41.12,8.01,-2.75,0.2,1.5,1.1,0.01,">1 nonsynonymous","I72L Y165S",2
"lib1","SARS-CoV-2","AAAACATGGTTCGCGT",1,17.78,10.56,-0.2,0.07,2.87,1.06,0,">1 nonsynonymous","F160N S184H",2
"lib1","SARS-CoV-2","AAAACATTAATCGACT",6,143.75,10.11,-0.65,0.04,2.85,1.01,0,"1 nonsynonymous","Y121K",1
"lib1","SARS-CoV-2","AAAACATTACGACCGA",10,25.94,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","F8W T15F F44S L95W N130L Q144V Y178G",7
"lib1","SARS-CoV-2","AAAACATTAGGACCAG",2,39.37,7.66,-3.11,0.19,1.5,1.07,0.01,">1 nonsynonymous","K56P I138V P161T",3
"lib1","SARS-CoV-2","AAAACATTCGCTAATC",3,56.67,7.91,-2.85,0.17,1.5,1.09,0.01,">1 nonsynonymous","K56M V71M N157S T201R",4
"lib1","SARS-CoV-2","AAAACATTGTAGTCCC",1,37.88,6.62,-4.14,0.54,1.5,1.21,0.04,">1 nonsynonymous","D68R I88R",2
"lib1","SARS-CoV-2","AAAACATTGTTTCACA",3,47.59,10.19,-0.57,0.08,2.03,1.05,0,">1 nonsynonymous","V52N N64D E154R A192P",4
"lib1","SARS-CoV-2","AAAACATTTATGTAAA",1,9.03,7.62,-3.15,0.35,1.5,1.25,0.03,">1 nonsynonymous","F17M C31A T85Y",3
"lib1","SARS-CoV-2","AAAACCAAACCAGCTA",2,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L A81L T100Y W106L C158T",5
"lib1","SARS-CoV-2","AAAACCAAAGACACGT",9,45.69,7.95,-2.81,0.26,1.5,1.23,0.03,">1 nonsynonymous","K56R G86E",2
"lib1","SARS-CoV-2","AAAACCAAATGGGCAG",3,23.26,9.16,-1.61,0.1,2.16,1.08,0,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","AAAACCAACCTAGACA",11,8.02,NA,NA,NA,NA,NA,NA,"stop","C6G P82M I104* Y123V",4
"lib1","SARS-CoV-2","AAAACCAACTATTGAT",8,42.83,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T46M P96W Y121H K128T P149H Q168K",6
"lib1","SARS-CoV-2","AAAACCAACTGCGAAA",2,29.82,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S19L N107L",2
"lib1","SARS-CoV-2","AAAACCAACTGCGGCG",9,120.32,10.75,-0.01,0.05,2.93,1.04,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","AAAACCAACTTACGCA",3,80.75,10.6,-0.16,0.07,2.9,1.06,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","AAAACCAAGATGATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14P C49T A81S T85Y N92M P169* V182L",7
"lib1","SARS-CoV-2","AAAACCAATAATACCG",1,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R P169M",2
"lib1","SARS-CoV-2","AAAACCAATCGCCGTT",2,16.13,9.96,-0.81,0.06,2.83,1.05,0,">1 nonsynonymous","V37G Q144N Q168G",3
"lib1","SARS-CoV-2","AAAACCACAACGATGA",1,36.66,6,-4.76,1.69,1.5,1.15,0.03,">1 nonsynonymous","L95M R127Y",2
"lib1","SARS-CoV-2","AAAACCACAAGACTTT",2,13.32,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","C102T",1
"lib1","SARS-CoV-2","AAAACCACACGTAAAT",5,36.01,6,-4.76,1.13,1.52,1.08,0,">1 nonsynonymous","S69G Y143K G174A T201S",4
"lib1","SARS-CoV-2","AAAACCACATAACTAC",1,46.74,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I2L F17A C31D I72A L188V",5
"lib1","SARS-CoV-2","AAAACCACCACAGAAT",6,196.53,10.46,-0.3,0.03,2.86,1.03,0,"1 nonsynonymous","A22L",1
"lib1","SARS-CoV-2","AAAACCACCACCAAAT",9,73.31,9.21,-1.56,0.13,1.5,1.09,0.01,">1 nonsynonymous","V11A G83N D90E D97S F160M",5
"lib1","SARS-CoV-2","AAAACCACTAAAATCT",2,57.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G K56G N120Y R127S I142F Y165E E186H K198S",8
"lib1","SARS-CoV-2","AAAACCACTAATTCCT",6,67.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T N107C S129L E141V",4
"lib1","SARS-CoV-2","AAAACCACTCATAAGA",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S D59T S69H N157S",4
"lib1","SARS-CoV-2","AAAACCACTTAAAGAG",6,70.82,10.77,0.01,0.07,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAACCAGACACGATT",4,31.24,6.09,-4.68,1.26,1.5,1.21,0.04,">1 nonsynonymous","V65E I88R",2
"lib1","SARS-CoV-2","AAAACCAGACTGCTGG",1,0.16,NA,NA,NA,NA,NA,NA,"stop","F17A D112A E135* Q176K",4
"lib1","SARS-CoV-2","AAAACCAGAGAGCCTT",5,49.1,10.05,-0.71,0.1,2.22,1.03,0,">1 nonsynonymous","S41R N58Y E141F",3
"lib1","SARS-CoV-2","AAAACCAGCTAATCTT",1,10.9,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C61V D68R G146W",3
"lib1","SARS-CoV-2","AAAACCAGGATCAATA",4,40.2,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R25I S45W",2
"lib1","SARS-CoV-2","AAAACCAGGGAAGATG",3,15.96,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L60K G86V L95A",3
"lib1","SARS-CoV-2","AAAACCAGGGGGCATA",2,13.53,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","T140F A145L N171P",3
"lib1","SARS-CoV-2","AAAACCAGGTCCTTGT",1,24.27,10.82,0.06,0.05,2.95,1.01,0,"1 nonsynonymous","S36N",1
"lib1","SARS-CoV-2","AAAACCAGTTTTCCAG",1,16.13,7.11,-3.65,0.49,1.5,1.04,0.07,">1 nonsynonymous","E10S T55K L131K",3
"lib1","SARS-CoV-2","AAAACCATATTTAAAC",3,23.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5A G86W F99N S139N",4
"lib1","SARS-CoV-2","AAAACCATGAGAAAAT",2,64.48,6.19,-4.58,0.86,1.5,1.17,0.03,">1 nonsynonymous","C31P C49N S69M",3
"lib1","SARS-CoV-2","AAAACCATGGATATGT",9,1.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L188N",1
"lib1","SARS-CoV-2","AAAACCATTTCAGGAT",6,0.86,NA,NA,NA,NA,NA,NA,"stop","S53M N107Y T148* T170L",4
"lib1","SARS-CoV-2","AAAACCATTTTAGCGC",7,8.37,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","AAAACCCAACGTACCA",1,48.21,10.87,0.11,0.07,2.86,1.08,0,">1 nonsynonymous","F44Y L131I",2
"lib1","SARS-CoV-2","AAAACCCAATGTGCTG",2,8.22,6,-4.76,1.85,3,1.06,0,">1 nonsynonymous","S41R V180R",2
"lib1","SARS-CoV-2","AAAACCCCAACTATTG",4,43.14,6.34,-4.43,0.26,1.5,1.12,0.01,">1 nonsynonymous","G86L G155S",2
"lib1","SARS-CoV-2","AAAACCCCAACTGTCT",2,13.8,8.49,-2.28,0.25,2.45,1.3,0.01,">1 nonsynonymous","C61R S113M",2
"lib1","SARS-CoV-2","AAAACCCCACCGAATC",16,63.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83K V103G P169V",3
"lib1","SARS-CoV-2","AAAACCCCGTAAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M R27W K56Q L95R",4
"lib1","SARS-CoV-2","AAAACCCCTATGTTGG",1,30.18,9.58,-1.18,0.17,2.26,1.05,0.01,">1 nonsynonymous","L5S I28F L162W",3
"lib1","SARS-CoV-2","AAAACCCGAAATGTGT",4,81.86,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R73L Y119G E141K G146A P197A",5
"lib1","SARS-CoV-2","AAAACCCGATATCTGT",10,69.42,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A105D G172N",2
"lib1","SARS-CoV-2","AAAACCCGTTGGGTAA",1,41.78,9.25,-1.52,0.06,2.81,1.11,0,">1 nonsynonymous","G166K L187F",2
"lib1","SARS-CoV-2","AAAACCCTAATTTACC",1,8.42,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V182L",1
"lib1","SARS-CoV-2","AAAACCCTTCCAAAAC",3,37.24,8.4,-2.36,0.23,1.69,1.12,0.02,">1 nonsynonymous","N1C N107G Y119H T170S",4
"lib1","SARS-CoV-2","AAAACCCTTGCTAGTG",3,56.3,10.8,0.03,0.09,2.9,1.06,0,"1 nonsynonymous","S36N",1
"lib1","SARS-CoV-2","AAAACCGAAACAATTA",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I L95S N120G A190V",4
"lib1","SARS-CoV-2","AAAACCGAGAATCCCG",3,45.13,10.58,-0.18,0.07,2.86,1.07,0,"1 nonsynonymous","A42H",1
"lib1","SARS-CoV-2","AAAACCGAGCTTGAAA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","P96R V103L V173*",3
"lib1","SARS-CoV-2","AAAACCGAGGGGCAAA",7,3.89,NA,NA,NA,NA,NA,NA,"stop","N1E A145L Q163K F167L P177*",5
"lib1","SARS-CoV-2","AAAACCGATACAAAGC",3,18.99,10.24,-0.53,0.07,2.92,1.04,0,">1 nonsynonymous","I80L S113A",2
"lib1","SARS-CoV-2","AAAACCGATATCTGCC",5,38.47,9.71,-1.06,0.14,1.75,1.17,0.01,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","AAAACCGATGTATCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","K48M I88* W106R",3
"lib1","SARS-CoV-2","AAAACCGATTGCTTAA",9,1.87,NA,NA,NA,NA,NA,NA,"stop","A22E T100F Q176*",3
"lib1","SARS-CoV-2","AAAACCGCAAAGGAAC",4,37.97,10.37,-0.39,0.05,2.91,1.04,0,">1 nonsynonymous","T55S Y121L V153S",3
"lib1","SARS-CoV-2","AAAACCGCAACTCTCG",4,42.54,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P7L S36E F167I",3
"lib1","SARS-CoV-2","AAAACCGCCAATTACC",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L E141S",2
"lib1","SARS-CoV-2","AAAACCGGCCGGGGCG",3,16.77,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V32N R73Y I104G",3
"lib1","SARS-CoV-2","AAAACCGGGGTAAAAC",6,70.72,10.83,0.06,0.08,2.94,1.02,0,"1 nonsynonymous","T140Q",1
"lib1","SARS-CoV-2","AAAACCGGTCCATTAG",3,58.18,10.57,-0.2,0.07,2.9,1.06,0,"1 nonsynonymous","V180I",1
"lib1","SARS-CoV-2","AAAACCGTCAAGGTAA",1,18.16,6.26,-4.5,1.11,1.5,1.21,0.04,">1 nonsynonymous","F8V R16Y G86Q N130Q",4
"lib1","SARS-CoV-2","AAAACCGTCTCCTCTG",1,5.82,10.79,0.02,0.13,2.99,1,0,">1 nonsynonymous","C61A N171I",2
"lib1","SARS-CoV-2","AAAACCGTGATCTGCC",1,35.07,6.2,-4.57,0.74,1.5,1.16,0.02,">1 nonsynonymous","F47T C61T I72C T85Q Y91V C150R",6
"lib1","SARS-CoV-2","AAAACCGTGGGATGCA",10,97.23,10.19,-0.57,0.06,2.82,1.08,0,">1 nonsynonymous","F17V Y39V L122H S129T",4
"lib1","SARS-CoV-2","AAAACCGTGTGATGAA",8,3.26,NA,NA,NA,NA,NA,NA,"stop","L38R G83V F134* N157G G196T",5
"lib1","SARS-CoV-2","AAAACCGTTCGGTTAG",1,118.61,8.23,-2.54,0.18,2.23,1.1,0.01,">1 nonsynonymous","T140N P169T Q176A",3
"lib1","SARS-CoV-2","AAAACCTAATTAGGCA",1,12.21,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T15C Y93S",2
"lib1","SARS-CoV-2","AAAACCTAATTCTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","I72* Y121S",2
"lib1","SARS-CoV-2","AAAACCTAGAGTACGA",2,31.93,10.85,0.08,0.08,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAACCTAGCATCAAC",5,63.5,8.6,-2.17,0.12,1.66,1.17,0,">1 nonsynonymous","S43D D59G Y91A S139N",4
"lib1","SARS-CoV-2","AAAACCTATGAAAATG",6,109.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77G C150K G174L Q176H P177C",5
"lib1","SARS-CoV-2","AAAACCTCAAATTTTC",3,57.12,9.1,-1.67,0.07,2.81,1.08,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","AAAACCTCAGATTGTA",1,22.63,10.08,-0.69,0.05,2.95,1.01,0,">1 nonsynonymous","T100H Y175H",2
"lib1","SARS-CoV-2","AAAACCTCATATTAAT",3,15.31,10.29,-0.48,0.08,2.82,1,0,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","AAAACCTCCGACCTGG",2,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C C61N S69G N107F A192D",5
"lib1","SARS-CoV-2","AAAACCTCGACAACAT",1,14.76,10.79,0.03,0.09,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACCTCGTTGCCGG",3,43.19,9.37,-1.39,0.07,2.85,1.04,0,">1 nonsynonymous","I142Y T148A G174Y",3
"lib1","SARS-CoV-2","AAAACCTCTAAGGTAA",6,86.73,10.13,-0.63,0.11,2.36,1.02,0.01,">1 nonsynonymous","R27S D59H A105G",3
"lib1","SARS-CoV-2","AAAACCTGACCCAGGG",10,173.21,7.24,-3.53,0.23,1.5,1.13,0.01,">1 nonsynonymous","N4V K87T D112F",3
"lib1","SARS-CoV-2","AAAACCTGCCAGTCAC",5,61.38,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","P96S Y123A I142C P177K",4
"lib1","SARS-CoV-2","AAAACCTGGCAGCATA",1,30.51,7.98,-2.78,0.19,1.77,1.16,0.01,">1 nonsynonymous","R27C N157C",2
"lib1","SARS-CoV-2","AAAACCTGTAAACGAA",2,14.44,9.97,-0.8,0.2,1.86,1.11,0.02,">1 nonsynonymous","T63K V180M S200L",3
"lib1","SARS-CoV-2","AAAACCTTAGGTGATA",4,19.84,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R27G F99S D112Y S139Y",4
"lib1","SARS-CoV-2","AAAACCTTGATAGCCC",3,0.75,NA,NA,NA,NA,NA,NA,"stop","R73* K87L",2
"lib1","SARS-CoV-2","AAAACGAAAAACACTT",1,10.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90P G116Q",2
"lib1","SARS-CoV-2","AAAACGAAACGCCATA",1,19.53,8.21,-2.56,0.27,2.33,1.17,0.03,">1 nonsynonymous","S139K F160R G166E L188M",4
"lib1","SARS-CoV-2","AAAACGAAATCATGCG",8,19.66,6.1,-4.66,0.38,1.5,1.09,0,">1 nonsynonymous","G83Y R179A H189F T201R",4
"lib1","SARS-CoV-2","AAAACGAACACGTAAT",3,23.46,10.37,-0.4,0.07,2.87,1.02,0,">1 nonsynonymous","S41W L60H F134W",3
"lib1","SARS-CoV-2","AAAACGAACCAAAAAG",1,40.05,6.57,-4.19,0.6,1.5,1.08,0.04,">1 nonsynonymous","Y35P K56R G86V G116T S129F Y165R",6
"lib1","SARS-CoV-2","AAAACGAACTTAAATC",2,31.67,10.03,-0.73,0.09,2.78,1.11,0,">1 nonsynonymous","N30L S43I F62M L188M P197A",5
"lib1","SARS-CoV-2","AAAACGAATTCGGACT",4,0.83,NA,NA,NA,NA,NA,NA,"stop","P7* V103K E141G",3
"lib1","SARS-CoV-2","AAAACGACACTATTTT",6,92.37,10.31,-0.45,0.06,2.76,1,0,">1 nonsynonymous","V11T A33V N130L",3
"lib1","SARS-CoV-2","AAAACGACATATATAC",4,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96D E141W A190C",3
"lib1","SARS-CoV-2","AAAACGACCATGAATA",7,102.2,6.58,-4.18,0.4,1.5,1.16,0.02,">1 nonsynonymous","I2Y F8V R27H Y119Q G152C",5
"lib1","SARS-CoV-2","AAAACGACCCCTCGCT",4,55.17,10.57,-0.19,0.03,2.9,1.06,0,">1 nonsynonymous","T3G K26H K56S",3
"lib1","SARS-CoV-2","AAAACGAGGATGAACG",4,25.83,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T3P C49D R73L G86E Y119E",5
"lib1","SARS-CoV-2","AAAACGATGAGGTACA",3,1.89,NA,NA,NA,NA,NA,NA,"stop","A42L T85* G166V",3
"lib1","SARS-CoV-2","AAAACGATTCAAATGT",7,40.7,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C61A I88G",2
"lib1","SARS-CoV-2","AAAACGATTCTGATGA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","F12* R25* V37W",3
"lib1","SARS-CoV-2","AAAACGATTGCCCGAC",4,43.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S S139Y",2
"lib1","SARS-CoV-2","AAAACGATTTCCTTAC",1,16.15,9.97,-0.79,0.11,2.04,1.01,0.01,">1 nonsynonymous","F12Y S41E",2
"lib1","SARS-CoV-2","AAAACGCAAAGCGGCA",3,41.43,9.17,-1.59,0.1,2.69,1.16,0,">1 nonsynonymous","T3W Y119E",2
"lib1","SARS-CoV-2","AAAACGCAAATACACC",7,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W N13P N107S N118G G146W",5
"lib1","SARS-CoV-2","AAAACGCACCTACCTA",1,9.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9N F99L Y121D R136I",4
"lib1","SARS-CoV-2","AAAACGCAGTTGCACG",1,2.58,NA,NA,NA,NA,NA,NA,"stop","S43W G86E G117K G146* F156S F167P",6
"lib1","SARS-CoV-2","AAAACGCATACGTATT",3,98.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9F W23E T85R Y91L S129C I138M",6
"lib1","SARS-CoV-2","AAAACGCATGATTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6L V37* L111I",3
"lib1","SARS-CoV-2","AAAACGCATTAGCCAT",8,110.42,6,-4.76,1.24,1.5,1.19,0.01,">1 nonsynonymous","G51V V52A D90S F134N P177L",5
"lib1","SARS-CoV-2","AAAACGCCATCCATAA",4,38.31,10.16,-0.6,0.06,2.96,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","AAAACGCCCACCCGAA",2,10.61,9.57,-1.2,0.16,1.92,1.08,0.01,">1 nonsynonymous","F8V E135N",2
"lib1","SARS-CoV-2","AAAACGCCCAGTATGT",3,28.12,10.28,-0.48,0.06,2.79,1.04,0,">1 nonsynonymous","G9R I104C",2
"lib1","SARS-CoV-2","AAAACGCCCGAATTTA",1,46.92,9.74,-1.02,0.09,2.64,1.03,0,">1 nonsynonymous","C6A G152Q",2
"lib1","SARS-CoV-2","AAAACGCCCGCTAGAG",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V C150M E154Q",3
"lib1","SARS-CoV-2","AAAACGCCGGTGAGGT",2,6.86,10.06,-0.7,0.18,2.25,1,0,">1 nonsynonymous","T46E D75M D97Y",3
"lib1","SARS-CoV-2","AAAACGCCGTCGCTTC",6,62.74,9.53,-1.24,0.2,1.5,1,0.02,">1 nonsynonymous","W106V F134S T201W",3
"lib1","SARS-CoV-2","AAAACGCGACACTTGG",6,5.26,NA,NA,NA,NA,NA,NA,"stop","L5* L38P G196K",3
"lib1","SARS-CoV-2","AAAACGCGCATCCGAG",1,20.43,6.44,-4.32,0.92,1.5,1.26,0.08,">1 nonsynonymous","Y35P V103S V115S Y123I Q144L",5
"lib1","SARS-CoV-2","AAAACGCGCGCCTTAT",1,33.87,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P54L D112L C150S",3
"lib1","SARS-CoV-2","AAAACGCTACGACCAT",2,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","AAAACGCTGGTCTGAA",4,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81N K87N Y165L",3
"lib1","SARS-CoV-2","AAAACGCTTATTGGGA",6,142.61,10.7,-0.06,0.05,2.88,1.08,0,"1 nonsynonymous","K128R",1
"lib1","SARS-CoV-2","AAAACGGAAACAAACT",2,42.28,10.66,-0.1,0.06,2.83,1.1,0,"1 nonsynonymous","K26Q",1
"lib1","SARS-CoV-2","AAAACGGACCAGCCAG",4,0.18,NA,NA,NA,NA,NA,NA,"stop","A22* C150Y",2
"lib1","SARS-CoV-2","AAAACGGCAATCTATC",9,0,NA,NA,NA,NA,NA,NA,"stop","C49A N92I K132* S164C",4
"lib1","SARS-CoV-2","AAAACGGGCCCGCACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N13C F99R N109K F156R",5
"lib1","SARS-CoV-2","AAAACGGGGGGACTAG",4,21.02,6.69,-4.08,0.39,1.5,1.11,0.02,">1 nonsynonymous","T3A P7K D97H F167M",4
"lib1","SARS-CoV-2","AAAACGGGTTCTAAAT",3,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R F70I G172W V182N",4
"lib1","SARS-CoV-2","AAAACGGTAAATTTTG",13,25.71,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","I2H G86R V182E",3
"lib1","SARS-CoV-2","AAAACGGTAACTCCAG",3,28.97,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F8D D90A W106L C158S Q168M V182F",6
"lib1","SARS-CoV-2","AAAACGGTCCGCTTCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","K114* G155V P161T",3
"lib1","SARS-CoV-2","AAAACGGTGGCACCTA",9,61.86,6.91,-3.86,0.22,1.5,1.15,0.01,">1 nonsynonymous","L5E F156T L162W L187V",4
"lib1","SARS-CoV-2","AAAACGGTTTCCGGGA",4,28.89,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","AAAACGTAAATACGCA",3,10.63,9.17,-1.59,0.14,2.86,1.16,0.02,"1 nonsynonymous","F126Y",1
"lib1","SARS-CoV-2","AAAACGTAACGTAGCG",4,54.71,10.41,-0.35,0.11,2.77,1.01,0.01,"1 nonsynonymous","E186F",1
"lib1","SARS-CoV-2","AAAACGTACATCTGGG",4,42.75,6.83,-3.93,0.3,1.5,1.14,0.02,">1 nonsynonymous","L60S R179Q A190S",3
"lib1","SARS-CoV-2","AAAACGTACGAAGAAA",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R V103A Y121L",3
"lib1","SARS-CoV-2","AAAACGTACTCTTGAG",8,2.78,NA,NA,NA,NA,NA,NA,"stop","I28* I138L",2
"lib1","SARS-CoV-2","AAAACGTATCCATCAT",1,33.38,10.81,0.05,0.06,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACGTATGTACCGT",1,46.7,6.69,-4.08,0.39,1.5,1.16,0.02,">1 nonsynonymous","A89S S113D",2
"lib1","SARS-CoV-2","AAAACGTATTGATGCG",5,140.76,10.42,-0.35,0.05,2.94,1.01,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","AAAACGTATTTAAAAC",2,30.83,10.24,-0.53,0.07,2.87,1.03,0,">1 nonsynonymous","Y35R R78A",2
"lib1","SARS-CoV-2","AAAACGTCACATAAAT",2,54.46,9.5,-1.26,0.08,2.83,1.07,0,">1 nonsynonymous","G117R A192G",2
"lib1","SARS-CoV-2","AAAACGTTCCACAGAT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","G9H L57C D90V Y119* K128E I138K",6
"lib1","SARS-CoV-2","AAAACGTTTCGAGTAC",3,104.86,9.59,-1.17,0.07,2.79,1.1,0,">1 nonsynonymous","L5N C61V Y119H",3
"lib1","SARS-CoV-2","AAAACGTTTGCCATTT",4,48.17,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5R V11T N92W F160H",4
"lib1","SARS-CoV-2","AAAACTAAAAACGTAA",2,29.69,6.85,-3.91,0.35,1.5,1.23,0.03,">1 nonsynonymous","D137T L187C",2
"lib1","SARS-CoV-2","AAAACTAAAATTAACT",6,1.18,NA,NA,NA,NA,NA,NA,"stop","N4A K94* G172N",3
"lib1","SARS-CoV-2","AAAACTAAAGAGTATA",1,34.73,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I2N G9R A33R V77L P96L I142D",6
"lib1","SARS-CoV-2","AAAACTAAATAGTGAT",6,100.53,10.37,-0.4,0.03,2.81,1.03,0,">1 nonsynonymous","S41Y P54D N64K Q84S I104Y",5
"lib1","SARS-CoV-2","AAAACTAACCCAATAA",7,6.98,NA,NA,NA,NA,NA,NA,"stop","T3L C61A Q84D T100* G152S",5
"lib1","SARS-CoV-2","AAAACTAACTGTCTAC",1,42.69,10.68,-0.08,0.09,2.89,1.06,0,">1 nonsynonymous","C61A C195F",2
"lib1","SARS-CoV-2","AAAACTAAGCGAAAGG",3,62.92,10.55,-0.22,0.03,2.96,1,0,">1 nonsynonymous","N120H F126L",2
"lib1","SARS-CoV-2","AAAACTAATAAATGAG",1,35.68,9.56,-1.2,0.17,1.76,1.04,0.01,">1 nonsynonymous","R16L T46N T63R G152F",4
"lib1","SARS-CoV-2","AAAACTAATAATTCTT",4,25.64,6.58,-4.19,0.6,1.5,1.29,0.04,">1 nonsynonymous","V52S L60Y P96S G155H",4
"lib1","SARS-CoV-2","AAAACTAATAGTAGAC",3,26.62,9.44,-1.33,0.29,1.5,1,0.06,">1 nonsynonymous","A89K G152S",2
"lib1","SARS-CoV-2","AAAACTAATCAGCTTA",11,60.26,6.14,-4.62,0.82,1.5,1.23,0.02,">1 nonsynonymous","C6L R16E S45L P54R D59I",5
"lib1","SARS-CoV-2","AAAACTAATGAGACCA",3,86.33,10.79,0.03,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACTACGCCATAGT",3,61.93,9.93,-0.84,0.12,2.34,1.04,0.01,">1 nonsynonymous","E10R R73K S129Y",3
"lib1","SARS-CoV-2","AAAACTACGTCATACA",6,5.06,NA,NA,NA,NA,NA,NA,"stop","G9I W23* S41T N107G V153K",5
"lib1","SARS-CoV-2","AAAACTACTTCGTGTC",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123F F160R",2
"lib1","SARS-CoV-2","AAAACTAGAAACACAA",1,8.43,10.7,-0.07,0.2,2.8,1.06,0.01,">1 nonsynonymous","L5R S53P",2
"lib1","SARS-CoV-2","AAAACTAGAAATGATG",21,102.03,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38V C158G N171I",3
"lib1","SARS-CoV-2","AAAACTAGAACTCAAC",6,51.85,9.76,-1.01,0.06,2.86,1.02,0,">1 nonsynonymous","S41Y K87E",2
"lib1","SARS-CoV-2","AAAACTAGCCTTAGTG",22,428.62,10.77,0,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACTAGGAAAAATA",2,72.41,9.97,-0.79,0.1,2.29,1.04,0,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","AAAACTAGTAACAATA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","Y35S G116D S184*",3
"lib1","SARS-CoV-2","AAAACTAGTATCTGGA",9,176.14,10.14,-0.63,0.05,2.78,1.02,0,">1 nonsynonymous","P7F V173W",2
"lib1","SARS-CoV-2","AAAACTATAAAGTAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","S41* L60K V103S",3
"lib1","SARS-CoV-2","AAAACTATAAATATAA",2,10.19,6,-4.76,2,3,1.11,0,">1 nonsynonymous","V20L Y35D D68L",3
"lib1","SARS-CoV-2","AAAACTATATAATATA",5,67.07,9.81,-0.95,0.12,2.34,1.08,0,"1 nonsynonymous","E76F",1
"lib1","SARS-CoV-2","AAAACTATATCACTCT",3,13.17,10.59,-0.18,0.1,2.98,1.03,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","AAAACTATATCATAGG",2,7.21,10.05,-0.72,0.21,2.75,1.19,0.01,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","AAAACTATCAAAAACT",1,8.63,10.43,-0.33,0.09,2.79,1.09,0,"1 nonsynonymous","V20A",1
"lib1","SARS-CoV-2","AAAACTATCAAAATTG",1,66.17,6.41,-4.35,0.41,1.5,1.21,0.01,">1 nonsynonymous","L60M A81V L162R",3
"lib1","SARS-CoV-2","AAAACTATCACATGCT",7,3.69,NA,NA,NA,NA,NA,NA,"stop","S36H Q144* Q176M",3
"lib1","SARS-CoV-2","AAAACTATCCGTTAAA",1,13.26,9.93,-0.83,0.19,2.46,1.03,0.01,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","AAAACTATGACGAGGG",2,59.12,10.58,-0.18,0.04,2.91,1.06,0,"1 nonsynonymous","K132W",1
"lib1","SARS-CoV-2","AAAACTATTAAAAAGG",1,7.81,10.11,-0.65,0.15,2.78,1.07,0.01,">1 nonsynonymous","T3I G152I",2
"lib1","SARS-CoV-2","AAAACTCAAAATCTAG",8,96.28,10.73,-0.04,0.07,2.92,1.03,0,">1 nonsynonymous","D97S V115A",2
"lib1","SARS-CoV-2","AAAACTCAAACAGTCA",1,12.2,6.02,-4.74,0.53,3,1.11,0,">1 nonsynonymous","A14H D90S P149L N157L G174E",5
"lib1","SARS-CoV-2","AAAACTCACCCCCAAG",2,9.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14Y C102R",2
"lib1","SARS-CoV-2","AAAACTCACCCTGAAC",2,35.06,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W23F Y39W T100D I142S Q163L G172M",6
"lib1","SARS-CoV-2","AAAACTCATAATTTAT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S45T D98V N157T A190E",5
"lib1","SARS-CoV-2","AAAACTCATTAGGGCA",18,98.13,7.28,-3.48,0.25,1.5,1.2,0.02,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","AAAACTCCGTCTTTTG",10,29.72,6,-4.76,2,2.01,1.24,0.01,">1 nonsynonymous","A18R F99R P177S S184K",4
"lib1","SARS-CoV-2","AAAACTCCGTTATTTT",1,96.75,10.2,-0.56,0.06,2.76,1.06,0,">1 nonsynonymous","E10D T55G A89S P149F F160L P197L",6
"lib1","SARS-CoV-2","AAAACTCGCAGTTGGC",2,51.6,6.24,-4.52,0.74,1.5,1.18,0.02,">1 nonsynonymous","V20M L38Q",2
"lib1","SARS-CoV-2","AAAACTCGCTAATTAC",5,5.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T85V Y93K C102G Y121L T148A N171T",6
"lib1","SARS-CoV-2","AAAACTCGGAACACTT",24,861.61,8.45,-2.32,0.11,2.59,1.07,0,">1 nonsynonymous","C61K T170A Q176S",3
"lib1","SARS-CoV-2","AAAACTCGTACAGTAT",1,20.63,8.86,-1.9,0.11,2.52,1.17,0,">1 nonsynonymous","N4S T100Y E141L F156C",4
"lib1","SARS-CoV-2","AAAACTCTAACTTTTG",16,340.58,8.75,-2.01,0.1,2.42,1.1,0,">1 nonsynonymous","D34R F126I",2
"lib1","SARS-CoV-2","AAAACTCTACACCAAG",9,63.43,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I142A Q176G E186Y",3
"lib1","SARS-CoV-2","AAAACTCTAGAATGTA",5,61.52,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9M N24C P54H F62A I80M L95Y V115K",7
"lib1","SARS-CoV-2","AAAACTCTCCGACCCC",6,79.48,9.35,-1.41,0.17,1.67,1.14,0.01,">1 nonsynonymous","S29Y F47N K56T V153A",4
"lib1","SARS-CoV-2","AAAACTCTCTTTCAGG",2,24.04,10.67,-0.1,0.04,2.99,1,0,">1 nonsynonymous","I2T R16F G83C F134Y",4
"lib1","SARS-CoV-2","AAAACTCTTAAAGGTA",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K56T P96S K114Y",4
"lib1","SARS-CoV-2","AAAACTCTTGAAAAAA",2,50.8,9.71,-1.06,0.12,2.05,1.08,0.01,"1 nonsynonymous","V11N",1
"lib1","SARS-CoV-2","AAAACTGAACAACAAA",11,44.7,6.21,-4.55,0.6,1.5,1.21,0.02,">1 nonsynonymous","F62S A89N D98S F134N T170R",5
"lib1","SARS-CoV-2","AAAACTGAACTAGGAC",14,99.82,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","V103L G166P P177S",3
"lib1","SARS-CoV-2","AAAACTGACTGGCCCT",3,48.72,9.43,-1.34,0.14,1.75,1.13,0.01,">1 nonsynonymous","C6Y Y35A G83Y",3
"lib1","SARS-CoV-2","AAAACTGAGTTCACTC",2,84.73,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","A33H V71M R136S G174K",4
"lib1","SARS-CoV-2","AAAACTGATAGTTGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","I80P V103C G116R R136D P169* S200A",6
"lib1","SARS-CoV-2","AAAACTGATGCAGAAG",7,82.7,9.16,-1.61,0.09,1.64,1.1,0,">1 nonsynonymous","V173S E186L",2
"lib1","SARS-CoV-2","AAAACTGATTTTAAGT",4,32.22,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N92Y T140I",2
"lib1","SARS-CoV-2","AAAACTGCAACATTTA",1,3.46,NA,NA,NA,NA,NA,NA,"stop","E10V T140G V194I T201*",4
"lib1","SARS-CoV-2","AAAACTGCACCCATCG",5,9.1,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R27M L60F I88C D137M S147Y G174R S200I",7
"lib1","SARS-CoV-2","AAAACTGCAGCACGAC",2,31.83,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A14H V20L S53I D112E L122R G166S",6
"lib1","SARS-CoV-2","AAAACTGCCTTGGGTA",15,141,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39L K48D V77T D90L F99L",5
"lib1","SARS-CoV-2","AAAACTGCGCGCAAAT",1,63.7,10.48,-0.29,0.04,2.85,1.07,0,">1 nonsynonymous","I2F K48E F62V D90N T148Y",5
"lib1","SARS-CoV-2","AAAACTGCGCGGGCCG",3,66.06,6.07,-4.69,0.59,1.5,1.19,0.01,">1 nonsynonymous","V32T C158L",2
"lib1","SARS-CoV-2","AAAACTGGACTATATT",8,45.08,10.54,-0.22,0.08,2.89,1,0,"1 nonsynonymous","P169Y",1
"lib1","SARS-CoV-2","AAAACTGGATAAGAAG",4,22.22,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N4M A105L P133Y",3
"lib1","SARS-CoV-2","AAAACTGGTAACTAGG",8,0.62,NA,NA,NA,NA,NA,NA,"stop","E10F K87Q T100H V153*",4
"lib1","SARS-CoV-2","AAAACTGGTGAAGAAT",2,55.11,10.04,-0.73,0.09,2.23,1,0,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","AAAACTGTACTTTAAC",5,37.52,6.12,-4.64,1.1,1.5,1.23,0.04,">1 nonsynonymous","Y35N K94T G166T",3
"lib1","SARS-CoV-2","AAAACTGTATTATAGT",5,126.87,10.68,-0.08,0.04,2.88,1.04,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","AAAACTGTATTCGCAA",6,48.07,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L57Y G86I K128Q",3
"lib1","SARS-CoV-2","AAAACTGTCTAGGGAT",1,28.34,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9Y G83R P96L D112Q N120S C158K Q176M",7
"lib1","SARS-CoV-2","AAAACTGTCTTGTGGT",3,17.09,6,-4.76,1.92,1.88,1.09,0.01,">1 nonsynonymous","V20M A33G N107R P149H",4
"lib1","SARS-CoV-2","AAAACTGTTATCAGTA",2,34.95,8.25,-2.52,0.24,2.1,1.13,0.02,">1 nonsynonymous","R73M A105V F156S",3
"lib1","SARS-CoV-2","AAAACTGTTATCTAGC",6,85.2,10.88,0.12,0.07,2.88,1.04,0,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","AAAACTGTTGACGAAG",1,9.51,8.88,-1.89,0.32,1.69,1.22,0.04,">1 nonsynonymous","R16Y C49L",2
"lib1","SARS-CoV-2","AAAACTTAAATTATAA",11,50.18,8.42,-2.34,0.3,1.5,1.03,0.04,">1 nonsynonymous","F62G N92S N120G S200P",4
"lib1","SARS-CoV-2","AAAACTTAAGCAGTAA",3,31.19,7.74,-3.03,0.23,2.02,1.23,0.03,">1 nonsynonymous","L122R C150M",2
"lib1","SARS-CoV-2","AAAACTTACCCCGGAC",1,10.99,10.76,0,0.11,2.81,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACTTACGACACCA",13,83.82,6,-4.76,1.62,1.5,1.23,0.03,">1 nonsynonymous","T3F R127E T140R",3
"lib1","SARS-CoV-2","AAAACTTAGCCGACAC",4,80.15,10.32,-0.44,0.04,2.86,1,0,">1 nonsynonymous","F8Y S29I N64Y",3
"lib1","SARS-CoV-2","AAAACTTATAAAATAT",2,5.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","AAAACTTATCGCGAAT",2,19.55,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51N D59M Y121R S129R T170H",5
"lib1","SARS-CoV-2","AAAACTTATTCTTAGG",8,103.07,10.78,0.02,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACTTCAAGGTTTA",10,130.53,9.82,-0.94,0.03,2.83,1.06,0,"1 nonsynonymous","I142K",1
"lib1","SARS-CoV-2","AAAACTTCGTGAAAAG",2,24.76,7.52,-3.25,0.29,1.5,1.09,0.02,">1 nonsynonymous","F99H F126Y K132T",3
"lib1","SARS-CoV-2","AAAACTTCTTACGAAC",4,15.2,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S43P C61M I80W P133L Q176M",5
"lib1","SARS-CoV-2","AAAACTTTAAGAAAAA",5,82.99,10.76,0,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAACTTTATCAATGT",6,40,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","T15A N24R V77E G86L T201C",5
"lib1","SARS-CoV-2","AAAACTTTCCATAAAT",2,10.26,6.68,-4.08,0.77,1.5,1.19,0.04,">1 nonsynonymous","T3H T15E V37I S139N P161Q",5
"lib1","SARS-CoV-2","AAAACTTTCGTTCCCT",1,24.91,6,-4.76,1.36,1.5,1.15,0.02,">1 nonsynonymous","P7T I88A E135L Y159W",4
"lib1","SARS-CoV-2","AAAACTTTGCAGTCAG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","A14P S41* G51R P149S",4
"lib1","SARS-CoV-2","AAAAGAAAAAATCGTT",2,58.48,10.7,-0.06,0.06,2.9,1.05,0,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","AAAAGAAAAATACGTT",2,7.58,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","S19K Y159Q K198L",3
"lib1","SARS-CoV-2","AAAAGAAAAATTAATA",11,123.97,9.09,-1.67,0.07,2.82,1.11,0,">1 nonsynonymous","N64Q Y119L",2
"lib1","SARS-CoV-2","AAAAGAAAACCTACAT",2,9.74,6.22,-4.54,1,1.5,1.14,0.07,">1 nonsynonymous","T63P Y93K D112N F134S I138L",5
"lib1","SARS-CoV-2","AAAAGAAAACGACCCG",2,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Q V65E I80A A105G K132T Y159D",6
"lib1","SARS-CoV-2","AAAAGAAAACTATCAC",2,60.75,10.5,-0.27,0.08,2.85,1,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","AAAAGAAAAGGACTTC",11,62.83,7.37,-3.39,0.37,1.5,1,0.05,">1 nonsynonymous","P54I A89M P96S Y119S Q176S",5
"lib1","SARS-CoV-2","AAAAGAAAATATAAAG",4,67.67,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y119A Y165C T170R",3
"lib1","SARS-CoV-2","AAAAGAAACATGAGTT",4,120.7,10.73,-0.04,0.07,2.92,1.06,0,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","AAAAGAAAGTGGATAT",2,1.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80M",1
"lib1","SARS-CoV-2","AAAAGAAAGTGTGGGA",5,35.45,6.01,-4.76,1.23,1.5,1.15,0.03,">1 nonsynonymous","G86R P133T P191H",3
"lib1","SARS-CoV-2","AAAAGAAATATAAAAG",3,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1E T15L V77S K128I S164N",5
"lib1","SARS-CoV-2","AAAAGAAATCCCACTT",6,115.23,10.74,-0.03,0.05,2.92,1.04,0,">1 nonsynonymous","L122V T148V",2
"lib1","SARS-CoV-2","AAAAGAAATGATGTCC",2,28.42,10.62,-0.15,0.05,2.91,1,0,">1 nonsynonymous","R16N F47Y T201K",3
"lib1","SARS-CoV-2","AAAAGAAATGCAACGG",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58F S108K L188N",3
"lib1","SARS-CoV-2","AAAAGAAATGTGATAT",2,51.58,9.4,-1.36,0.1,1.8,1.12,0,">1 nonsynonymous","F17L C61L K198S",3
"lib1","SARS-CoV-2","AAAAGAAATTAAAAAT",15,172.79,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6D L38S W106V K128G G146T",5
"lib1","SARS-CoV-2","AAAAGAACACAAAAGT",3,63.86,10.23,-0.53,0.05,2.69,1.07,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","AAAAGAACACATCATC",1,57.42,10.18,-0.58,0.07,2.89,1,0,">1 nonsynonymous","D59L G116S",2
"lib1","SARS-CoV-2","AAAAGAACACGCTATG",5,65.88,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I104L C158G Y165I",3
"lib1","SARS-CoV-2","AAAAGAACAGCCTTAA",2,83.59,9.08,-1.69,0.16,2.06,1.09,0.01,">1 nonsynonymous","Y121V K132M P149L",3
"lib1","SARS-CoV-2","AAAAGAACAGCGACTG",5,63.71,10.76,0,0.05,2.96,1.02,0,"1 nonsynonymous","T63G",1
"lib1","SARS-CoV-2","AAAAGAACATATGCCA",2,38.52,9.54,-1.22,0.23,2.67,1.28,0.04,"1 nonsynonymous","A18V",1
"lib1","SARS-CoV-2","AAAAGAACCAATACGA",5,94.17,10.23,-0.53,0.05,2.79,1.05,0,">1 nonsynonymous","I80V S129L T201A",3
"lib1","SARS-CoV-2","AAAAGAACCCACCCTA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","D90F F99*",2
"lib1","SARS-CoV-2","AAAAGAACCGTGGTCC",7,35.81,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","D59R G101F W106L S200R",4
"lib1","SARS-CoV-2","AAAAGAACCGTGTCCA",5,24.71,10.74,-0.03,0.08,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGAACGATTTACA",12,58.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S S45G C49K C61M",4
"lib1","SARS-CoV-2","AAAAGAACGTAGAACA",1,2.23,NA,NA,NA,NA,NA,NA,"stop","F17* R25S L38F F99Q Y119G Q144R Q176S",7
"lib1","SARS-CoV-2","AAAAGAACTAAGTATA",2,27.52,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G9Q S19K N40E L95A Y143V C150E L162M P177H",8
"lib1","SARS-CoV-2","AAAAGAACTACTAGCA",2,111.53,10.81,0.04,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGAACTGAAACAC",5,63.18,9.94,-0.82,0.11,2.14,1.07,0.01,">1 nonsynonymous","C6V F12L D97Y",3
"lib1","SARS-CoV-2","AAAAGAAGATACCCCG",1,19.67,6,-4.76,1.09,1.5,1.12,0.01,">1 nonsynonymous","N4V G51V A81V N157E",4
"lib1","SARS-CoV-2","AAAAGAAGCAACACGT",1,40.23,10.84,0.08,0.1,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGAAGCCACATCG",1,28.48,6,-4.76,0.57,3,1.16,0.01,">1 nonsynonymous","C6Q N58M Y143L P149N",4
"lib1","SARS-CoV-2","AAAAGAAGCGCATATC",3,32.94,6.58,-4.19,0.35,1.5,1.04,0.01,">1 nonsynonymous","C6S V52A I88C S113Y P149L",5
"lib1","SARS-CoV-2","AAAAGAAGTTAACACA",3,12.63,6.32,-4.45,0.83,1.5,1.13,0.06,">1 nonsynonymous","C61T A81W P133R Y178S",4
"lib1","SARS-CoV-2","AAAAGAAGTTGTGAAA",5,48.79,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","Y93T Y143P",2
"lib1","SARS-CoV-2","AAAAGAATAAAGGTAT",5,24.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C6I F44A N58M Q144L G174R",5
"lib1","SARS-CoV-2","AAAAGAATACCTTTCT",4,134.36,10.59,-0.18,0.05,2.96,1,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","AAAAGAATATGATACT",2,26.01,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","V37E N107Y Y143S V181L",4
"lib1","SARS-CoV-2","AAAAGAATCAGTCAGG",6,161.93,10.69,-0.08,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGAATCTACTTCA",4,18.77,6,-4.76,2,3,1.08,0,">1 nonsynonymous","S19R S45L K56H Y119C E154Y",5
"lib1","SARS-CoV-2","AAAAGACACTACCTCC",8,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64K A105L N157I",3
"lib1","SARS-CoV-2","AAAAGACACTTGTGGA",5,134.82,10.01,-0.75,0.1,2.22,1.05,0,">1 nonsynonymous","T3R V71M",2
"lib1","SARS-CoV-2","AAAAGACATGCTTTAG",6,36.12,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","S19L T63I F99R E141L K198M",5
"lib1","SARS-CoV-2","AAAAGACATTCAATAC",5,22.62,6.06,-4.71,1.04,1.5,1.16,0.03,">1 nonsynonymous","T3V P96K Y143V C158T",4
"lib1","SARS-CoV-2","AAAAGACCTTCCCACT",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R V103G G116A",3
"lib1","SARS-CoV-2","AAAAGACCTTGTATAT",1,10.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Y R25H G101F N120S R136F",5
"lib1","SARS-CoV-2","AAAAGACGAATCTACG",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A D90H G101V G174E",4
"lib1","SARS-CoV-2","AAAAGACGAGTAAAAA",2,43.27,10.62,-0.15,0.04,2.94,1,0,">1 nonsynonymous","E10D T15D",2
"lib1","SARS-CoV-2","AAAAGACGGCCGAGAA",4,27.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49F L95G",2
"lib1","SARS-CoV-2","AAAAGACGGGTATACA",2,6.01,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","R73W P82E Y91F K114Y",4
"lib1","SARS-CoV-2","AAAAGACTGCTGATGG",1,5.66,6,-4.76,1.21,1.5,1.06,0.01,">1 nonsynonymous","E10F K87Y K94F S139T G152D K198T",6
"lib1","SARS-CoV-2","AAAAGACTGTTACCAT",3,33.15,10.68,-0.08,0.08,2.9,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAGAGAAACTCACT",1,5.72,6.46,-4.31,0.74,1.5,1,0.07,">1 nonsynonymous","F47H F99Y",2
"lib1","SARS-CoV-2","AAAAGAGAATCAACTA",2,29.61,10.79,0.03,0.07,2.9,1,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","AAAAGAGACATACTAG",2,20.01,7.43,-3.33,0.47,1.5,1.26,0.05,">1 nonsynonymous","T3P V65S K128H S139T Y178S",5
"lib1","SARS-CoV-2","AAAAGAGACCCACAGA",4,100.39,8.26,-2.51,0.18,1.54,1.16,0.01,">1 nonsynonymous","V65Q S129F G166T T201S",4
"lib1","SARS-CoV-2","AAAAGAGACTAAGCGG",2,23.38,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2W K56C D97E F126S G146V",5
"lib1","SARS-CoV-2","AAAAGAGAGCACTTTC",2,16.41,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6A N58Y G74S K94S",4
"lib1","SARS-CoV-2","AAAAGAGAGGGTGCTT",6,110.92,8.65,-2.11,0.07,2.93,1.04,0,">1 nonsynonymous","I2S Y175N K199N",3
"lib1","SARS-CoV-2","AAAAGAGAGGTTAACC",8,55.25,6.04,-4.73,0.94,1.5,1.19,0.02,">1 nonsynonymous","Y35L G51C F62S S69R",4
"lib1","SARS-CoV-2","AAAAGAGATATATTAT",7,44.81,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V11P A18I N58R G155I",4
"lib1","SARS-CoV-2","AAAAGAGATCCAGATG",4,1.21,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","AAAAGAGATGACTGAA",10,4.32,NA,NA,NA,NA,NA,NA,"stop","S41R L95R D112*",3
"lib1","SARS-CoV-2","AAAAGAGCAACAAAAA",10,42.17,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I88W Y121L P149K",3
"lib1","SARS-CoV-2","AAAAGAGCATACAACA",3,83.19,9.74,-1.02,0.09,2.6,1.09,0,">1 nonsynonymous","A18Q V32K T63L Y121L",4
"lib1","SARS-CoV-2","AAAAGAGCCAAGTATT",1,27.32,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y93C A105L I142D",3
"lib1","SARS-CoV-2","AAAAGAGGAGACGTAC",1,20.9,10.75,-0.01,0.05,2.91,1.07,0,"1 nonsynonymous","E76D",1
"lib1","SARS-CoV-2","AAAAGAGGCCCGTTTC",6,49.54,10.72,-0.05,0.04,2.95,1.03,0,">1 nonsynonymous","G9Q V37D K128N",3
"lib1","SARS-CoV-2","AAAAGAGGCTCTTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D68* R127Q S184H",3
"lib1","SARS-CoV-2","AAAAGAGGTCCCATTT",18,215.41,10.81,0.05,0.07,2.85,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAGAGTAATCCAAA",3,27.88,10.72,-0.04,0.05,2.94,1.01,0,">1 nonsynonymous","F62A N120A",2
"lib1","SARS-CoV-2","AAAAGAGTATAATCGA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L I80C T100F K132V",4
"lib1","SARS-CoV-2","AAAAGAGTGAACCAGA",3,731.81,8.53,-2.24,0.14,1.88,1.13,0.01,">1 nonsynonymous","L5E S45W S113T T148V",4
"lib1","SARS-CoV-2","AAAAGAGTGTTGACCT",1,14.25,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14G S41P Y91N T100N Y119G",5
"lib1","SARS-CoV-2","AAAAGATAAAAATCCA",2,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S F62D T85M",3
"lib1","SARS-CoV-2","AAAAGATAAAACACTG",6,59.46,10.61,-0.15,0.05,2.89,1.09,0,">1 nonsynonymous","C61Q E154N P197G",3
"lib1","SARS-CoV-2","AAAAGATAAAGCATGC",2,36.67,9.85,-0.91,0.11,2.52,1.04,0,">1 nonsynonymous","I28M I72L A81K D98S",4
"lib1","SARS-CoV-2","AAAAGATAAATGGAGG",19,222.46,9.79,-0.98,0.09,1.91,1.07,0,">1 nonsynonymous","G51Y K128S K132L",3
"lib1","SARS-CoV-2","AAAAGATAATATCCAG",2,10.57,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","D59T L95Y G101V E141Y",4
"lib1","SARS-CoV-2","AAAAGATAATGACAAG",3,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S T46C V77S P96R W106A N151Q P169C T201C",8
"lib1","SARS-CoV-2","AAAAGATAATTAATTA",19,259.24,9.68,-1.08,0.08,2.36,1.07,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","AAAAGATACTCGTCAC",4,31.62,10.62,-0.14,0.04,2.89,1.01,0,"1 nonsynonymous","Y123V",1
"lib1","SARS-CoV-2","AAAAGATAGCGCGGAT",5,68.4,10.66,-0.1,0.06,2.92,1.02,0,">1 nonsynonymous","Y39C A67L",2
"lib1","SARS-CoV-2","AAAAGATAGTTATATA",1,72.06,10.36,-0.4,0.03,2.93,1.01,0,">1 nonsynonymous","G9A Y91I",2
"lib1","SARS-CoV-2","AAAAGATATAACCTTC",1,5.74,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","S36T T55P N157Y R179L",4
"lib1","SARS-CoV-2","AAAAGATATATACAGT",2,14.34,8.9,-1.86,0.3,1.5,1,0.04,">1 nonsynonymous","Y50H F62R",2
"lib1","SARS-CoV-2","AAAAGATATCAAGCCT",10,120.7,10.24,-0.53,0.06,2.76,1.03,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","AAAAGATATTGTAATT",7,71.4,10.74,-0.02,0.07,2.9,1.07,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","AAAAGATCAAAAATAA",4,17.04,10.52,-0.25,0.07,2.79,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGATCAAACTGAA",13,0.55,NA,NA,NA,NA,NA,NA,"stop","N1K S53F D59* P82R T100W T140W",6
"lib1","SARS-CoV-2","AAAAGATCCCTCAAGG",6,79.29,10.71,-0.05,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGATCTCATACAT",4,83.66,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86V G116A",2
"lib1","SARS-CoV-2","AAAAGATCTTAAGTAC",3,15.22,10.12,-0.65,0.08,2.77,1.01,0,">1 nonsynonymous","T3S S139A P149F",3
"lib1","SARS-CoV-2","AAAAGATCTTCTACCC",3,87.63,8.92,-1.85,0.1,2.09,1.14,0,">1 nonsynonymous","I2P E154V Y165I",3
"lib1","SARS-CoV-2","AAAAGATCTTGCTACT",4,106.3,10.6,-0.17,0.05,2.89,1.04,0,">1 nonsynonymous","I2N L5F K87R E141V",4
"lib1","SARS-CoV-2","AAAAGATGAACTAACC",11,73.96,6,-4.76,1.95,1.5,1.17,0.01,">1 nonsynonymous","I2R R124Q",2
"lib1","SARS-CoV-2","AAAAGATGACAAAGTA",6,69.85,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6I G51N Y119M T170M V173Q",5
"lib1","SARS-CoV-2","AAAAGATGCCACAAGA",8,105.27,10.82,0.06,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGATGCGCAGTCC",1,27.72,10.61,-0.15,0.06,2.94,1,0,"1 nonsynonymous","E10M",1
"lib1","SARS-CoV-2","AAAAGATGCTAGACCT",1,5.24,10.1,-0.66,0.4,2.13,1,0.02,">1 nonsynonymous","P82T T201K",2
"lib1","SARS-CoV-2","AAAAGATGTGAACTCT",2,31.54,10.92,0.16,0.04,2.97,1.01,0,">1 nonsynonymous","R16K D90N",2
"lib1","SARS-CoV-2","AAAAGATGTGGGAGAT",2,26.18,8.46,-2.3,0.29,1.5,1.19,0.04,">1 nonsynonymous","R27D L60G G83T D98S",4
"lib1","SARS-CoV-2","AAAAGATGTTATACAT",4,25.58,10.69,-0.08,0.05,3,1,0,"1 nonsynonymous","A42F",1
"lib1","SARS-CoV-2","AAAAGATTAAGTACAT",2,0.85,NA,NA,NA,NA,NA,NA,"stop","R16I Y91* D97F P149M Y178A",5
"lib1","SARS-CoV-2","AAAAGATTAATCAAAT",8,0.66,NA,NA,NA,NA,NA,NA,"stop","T3A C61Q Q144*",3
"lib1","SARS-CoV-2","AAAAGATTAATGTTTT",9,8.16,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3V K94N I104A K132S C150W",5
"lib1","SARS-CoV-2","AAAAGATTACTAGGGG",1,18.15,10.73,-0.04,0.12,2.83,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGATTAGATAAAA",1,20.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V R124M F156R",3
"lib1","SARS-CoV-2","AAAAGATTATTGGTGG",1,0.7,NA,NA,NA,NA,NA,NA,"stop","C6V D68* P133W G155F",4
"lib1","SARS-CoV-2","AAAAGATTGCATCATC",11,90.54,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C31I A67F R136G G166S N171R",5
"lib1","SARS-CoV-2","AAAAGCAAGGGTCCCT",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M F44G R73F R127W I138W",5
"lib1","SARS-CoV-2","AAAAGCAAGGTATGAA",7,35.91,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","T63P I88R L122R",3
"lib1","SARS-CoV-2","AAAAGCAAGTTGTCCC",4,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K C102K S129I S139L",4
"lib1","SARS-CoV-2","AAAAGCACAAGCGATT",3,25.28,10.67,-0.1,0.03,2.98,1.01,0,"1 nonsynonymous","N64P",1
"lib1","SARS-CoV-2","AAAAGCACACTCCTTT",7,31.12,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L95M E135P P191Y",3
"lib1","SARS-CoV-2","AAAAGCACATCTATAT",5,61.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S F99R F134M",3
"lib1","SARS-CoV-2","AAAAGCACGGTGCCTC",8,101.89,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y21P A33S F44E A105L F167V",5
"lib1","SARS-CoV-2","AAAAGCACTCCTAGCA",2,61.11,10.1,-0.66,0.06,2.9,1.04,0,">1 nonsynonymous","K87S K128L",2
"lib1","SARS-CoV-2","AAAAGCACTGGGAGCA",4,26.09,8.66,-2.11,0.17,1.85,1.14,0.01,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","AAAAGCATAAACACTA",1,31.15,8.6,-2.16,0.3,1.5,1,0.03,">1 nonsynonymous","T3A K94D K199V",3
"lib1","SARS-CoV-2","AAAAGCATACCGCAGG",3,0.53,NA,NA,NA,NA,NA,NA,"stop","P82Q G146L T201*",3
"lib1","SARS-CoV-2","AAAAGCATCCAATTTC",8,63.19,6,-4.76,1.35,1.5,1.2,0.03,">1 nonsynonymous","L5V S53V G101P T148G P169F",5
"lib1","SARS-CoV-2","AAAAGCATCCAGCAAT",2,50.28,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N64I I80R R124M",3
"lib1","SARS-CoV-2","AAAAGCATCCCGCGTA",7,71.52,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P96E S113T E154M",3
"lib1","SARS-CoV-2","AAAAGCATCTTATGAC",12,146.6,10.45,-0.31,0.05,2.91,1.05,0,">1 nonsynonymous","T55W V173G",2
"lib1","SARS-CoV-2","AAAAGCATTATCAAAA",3,26.83,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G51M D68V K128I A190E",4
"lib1","SARS-CoV-2","AAAAGCATTCAGCCGT",13,157.02,10.51,-0.25,0.05,2.9,1.02,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","AAAAGCATTTGTCAAC",1,0.95,NA,NA,NA,NA,NA,NA,"stop","V37L F47* T148M N171W",4
"lib1","SARS-CoV-2","AAAAGCCACACCCCTT",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M N13D G51I",3
"lib1","SARS-CoV-2","AAAAGCCACCCCCTCA",1,33.93,10.76,0,0.05,2.91,1.05,0,">1 nonsynonymous","D97R L122F",2
"lib1","SARS-CoV-2","AAAAGCCACCTTTGCA",3,26.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A105G G172Y",2
"lib1","SARS-CoV-2","AAAAGCCATACGAAAA",3,12.44,7.52,-3.24,0.45,1.5,1,0.07,">1 nonsynonymous","D97E N118L G172K Y178G",4
"lib1","SARS-CoV-2","AAAAGCCCCCTGAAAC",1,15.68,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L38T S69F N92Y",3
"lib1","SARS-CoV-2","AAAAGCCCGTGATTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C6D Y91* D98* F167* V180F",5
"lib1","SARS-CoV-2","AAAAGCCCTAGGGTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S Y121H G155L",3
"lib1","SARS-CoV-2","AAAAGCCCTGTCAAGC",5,28.17,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41E Q84H S113I",3
"lib1","SARS-CoV-2","AAAAGCCGATGACATC",2,225.41,9.39,-1.37,0.07,2.64,1.1,0,">1 nonsynonymous","K128R T148F P177S P197Y",4
"lib1","SARS-CoV-2","AAAAGCCGCATTTAAC",7,39.85,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","F8L N13H K94T",3
"lib1","SARS-CoV-2","AAAAGCCGTACCACGT",1,26.23,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","AAAAGCGAAAGCTAAA",5,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E A105C T201L",3
"lib1","SARS-CoV-2","AAAAGCGAAATATTGA",3,1.76,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","AAAAGCGAATTTGTTT",7,91.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R27D K94A G101S",3
"lib1","SARS-CoV-2","AAAAGCGACAAAAGCT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","F8D N107*",2
"lib1","SARS-CoV-2","AAAAGCGAGGGGTAAC",7,0.19,NA,NA,NA,NA,NA,NA,"stop","N13* P96A V103T N120E C158S",5
"lib1","SARS-CoV-2","AAAAGCGCACCAAATT",1,21.2,10.52,-0.24,0.41,1.5,1,0.06,">1 nonsynonymous","Y35S T63F Q84L P191T",4
"lib1","SARS-CoV-2","AAAAGCGCTTGTCAGT",3,44.18,6,-4.76,1.22,1.5,1.13,0.01,">1 nonsynonymous","K48I L122Y P161L",3
"lib1","SARS-CoV-2","AAAAGCGTATTACACG",2,17.95,9.95,-0.81,0.08,2.02,1,0,">1 nonsynonymous","N13T R136I",2
"lib1","SARS-CoV-2","AAAAGCTAAATAATAG",1,24.64,10.67,-0.09,0.08,2.82,1.11,0,">1 nonsynonymous","Y39L R78L",2
"lib1","SARS-CoV-2","AAAAGCTAAATCCTCG",2,15.05,10.85,0.09,0.11,2.87,1.04,0,"1 nonsynonymous","T100K",1
"lib1","SARS-CoV-2","AAAAGCTATCATCAGG",6,102.33,6,-4.76,2,2.26,1.21,0.01,">1 nonsynonymous","V20L Y93T N107V P149T",4
"lib1","SARS-CoV-2","AAAAGCTCATTTAATA",2,32.24,10.61,-0.16,0.03,2.93,1.05,0,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","AAAAGCTCTACTAAAG",1,18.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14R Y50S",2
"lib1","SARS-CoV-2","AAAAGCTGACTTCTCC",2,7.32,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L57S G86R R127H V153N F167T",5
"lib1","SARS-CoV-2","AAAAGCTGAGATTGCA",7,14.24,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","C49G G146D L183A",3
"lib1","SARS-CoV-2","AAAAGCTTAAGTTGGA",2,27.86,10.79,0.03,0.07,2.94,1.04,0,">1 nonsynonymous","A22K F160R",2
"lib1","SARS-CoV-2","AAAAGCTTAATATAAA",3,8.29,6.67,-4.09,0.93,1.5,1.19,0.04,">1 nonsynonymous","A81L G146Y H189Y",3
"lib1","SARS-CoV-2","AAAAGCTTCAATTTCG",6,100.04,9.96,-0.8,0.09,2.18,1.06,0,">1 nonsynonymous","I2S G51L N110M",3
"lib1","SARS-CoV-2","AAAAGCTTGGAGTAGA",3,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R Y93T A105F P133R",4
"lib1","SARS-CoV-2","AAAAGCTTGTTCATTT",6,128.02,8.47,-2.3,0.24,1.58,1.14,0.02,">1 nonsynonymous","Q79L V115L L125A P133F L188F",5
"lib1","SARS-CoV-2","AAAAGCTTTAATTGAA",1,34.14,9.81,-0.96,0.1,1.91,1.13,0,">1 nonsynonymous","N4W T46C P149H",3
"lib1","SARS-CoV-2","AAAAGCTTTCTCAGCT",2,172.98,8.75,-2.02,0.11,2.05,1.17,0,">1 nonsynonymous","V11L Q176L",2
"lib1","SARS-CoV-2","AAAAGGAAACCAAGGG",1,38.47,10.19,-0.58,0.1,2.67,1.01,0,">1 nonsynonymous","L57A T140D",2
"lib1","SARS-CoV-2","AAAAGGAATCATAACT",1,75.19,8.7,-2.07,0.15,1.56,1.17,0.01,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","AAAAGGACAAAGACGT",5,118.43,6,-4.76,1.25,1.5,1.16,0.01,">1 nonsynonymous","I2F N40T E141A Y165E",4
"lib1","SARS-CoV-2","AAAAGGACAACAGCGC",3,49.51,10.76,0,0.07,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGGACAGGCATAC",2,12.68,9.36,-1.4,0.23,1.63,1.08,0.02,">1 nonsynonymous","N30V N109I",2
"lib1","SARS-CoV-2","AAAAGGACATCTAACA",6,118.78,10.47,-0.29,0.05,2.89,1.07,0,">1 nonsynonymous","T148Y G152H",2
"lib1","SARS-CoV-2","AAAAGGACTGAATCTT",2,32.13,10.26,-0.51,0.07,2.88,1.01,0,">1 nonsynonymous","K48V D75F",2
"lib1","SARS-CoV-2","AAAAGGAGAGAGACCG",1,38.23,10.5,-0.27,0.07,2.9,1,0,">1 nonsynonymous","A18S G51R L60V",3
"lib1","SARS-CoV-2","AAAAGGAGCAAGATTG",6,162.26,10,-0.77,0.04,2.9,1,0,"1 nonsynonymous","P177A",1
"lib1","SARS-CoV-2","AAAAGGAGCGTTATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","N64R I138Y Y165L K199*",4
"lib1","SARS-CoV-2","AAAAGGAGGTCGATAA",4,124.24,8.5,-2.26,0.1,2.29,1.08,0,">1 nonsynonymous","G155A Q176S",2
"lib1","SARS-CoV-2","AAAAGGAGTCGAACAA",3,0.41,NA,NA,NA,NA,NA,NA,"stop","R136W Q144S P161N T201*",4
"lib1","SARS-CoV-2","AAAAGGATAATAGGCC",5,51.03,10.49,-0.27,0.05,2.93,1.01,0,">1 nonsynonymous","N110T F134A",2
"lib1","SARS-CoV-2","AAAAGGATATCCGTCT",1,8.56,10.81,0.05,0.16,2.8,1,0.01,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","AAAAGGATATGTAGTA",1,37.62,10.83,0.06,0.06,2.89,1.03,0,"1 nonsynonymous","I138M",1
"lib1","SARS-CoV-2","AAAAGGATGAACAAGA",2,40.65,10.28,-0.49,0.08,2.46,1.04,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","AAAAGGATTCGTACAA",2,34.47,10.67,-0.1,0.07,2.94,1.04,0,"1 nonsynonymous","S200G",1
"lib1","SARS-CoV-2","AAAAGGCAAAATTAAA",1,15.02,9.33,-1.43,0.14,1.98,1,0.01,">1 nonsynonymous","F62C Y91T",2
"lib1","SARS-CoV-2","AAAAGGCAAACAAAAA",2,30.56,9.33,-1.44,0.17,1.76,1.08,0.01,">1 nonsynonymous","N64S P82L",2
"lib1","SARS-CoV-2","AAAAGGCAATCCGAAC",3,28.43,9.9,-0.87,0.13,2.18,1.03,0.01,">1 nonsynonymous","L57I E135Y",2
"lib1","SARS-CoV-2","AAAAGGCAATTTGCAC",7,0.28,NA,NA,NA,NA,NA,NA,"stop","Y21A Q84L G117T Y123* G166I",5
"lib1","SARS-CoV-2","AAAAGGCAGCCAACTA",3,55.55,10.7,-0.07,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGGCATTTTGGTC",1,36.89,10.01,-0.75,0.07,2.93,1.03,0,">1 nonsynonymous","L122R F156G",2
"lib1","SARS-CoV-2","AAAAGGCCAACAAGTC",6,32.2,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N13W R27N V52F N58S S113I I142R L187T",7
"lib1","SARS-CoV-2","AAAAGGCCACCGATAA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","Q84P D137* R179M",3
"lib1","SARS-CoV-2","AAAAGGCCCACTAAAT",4,82.22,9.69,-1.08,0.06,2.8,1.08,0,">1 nonsynonymous","V37C Y159H G196K S200N",4
"lib1","SARS-CoV-2","AAAAGGCCGAAATGTA",5,3.07,NA,NA,NA,NA,NA,NA,"stop","E135S Y159*",2
"lib1","SARS-CoV-2","AAAAGGCGACCTCAAC",2,39.38,10.83,0.06,0.08,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAAGGCGGAATTGAA",4,3.11,NA,NA,NA,NA,NA,NA,"stop","Y91S Y121* F167C",3
"lib1","SARS-CoV-2","AAAAGGCGGTCCACCA",8,6.16,NA,NA,NA,NA,NA,NA,"stop","D34L A89* N107Y I138M G174R K198F",6
"lib1","SARS-CoV-2","AAAAGGGAAATACGCC",2,65.04,10.76,-0.01,0.08,2.83,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGGGAACAAAAAG",2,34.34,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S41G K56L Y119L G166I G174T",5
"lib1","SARS-CoV-2","AAAAGGGATAATTCAT",7,44.76,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","G9H C61T R179L",3
"lib1","SARS-CoV-2","AAAAGGGATAGAAAAG",1,12.01,10.69,-0.07,0.08,3,1,0,">1 nonsynonymous","G9C K48R T201L",3
"lib1","SARS-CoV-2","AAAAGGGGCGGACGCA",7,23.14,10.01,-0.76,0.12,2.74,1.14,0.01,">1 nonsynonymous","V115K Q163E P197S",3
"lib1","SARS-CoV-2","AAAAGGGGGATCTTTA",1,20.79,10.83,0.07,0.06,2.84,1.13,0,">1 nonsynonymous","S36G T201K",2
"lib1","SARS-CoV-2","AAAAGGGGTAAAGATT",2,40.25,10.63,-0.13,0.04,2.93,1,0,"1 nonsynonymous","R27W",1
"lib1","SARS-CoV-2","AAAAGGGTAAGTGAAT",3,33.83,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N4F S19W Y119T R136T",4
"lib1","SARS-CoV-2","AAAAGGGTCCAATCTA",10,23.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48A L60C I104Q R136V G152T",5
"lib1","SARS-CoV-2","AAAAGGGTGAGTAACT",2,8.28,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T55G W106S Y143G G152L C158W",5
"lib1","SARS-CoV-2","AAAAGGTAAATTATAC",3,3.08,NA,NA,NA,NA,NA,NA,"stop","K48* T85L V180K",3
"lib1","SARS-CoV-2","AAAAGGTACACTTAAA",3,28.82,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F99L R124V C158S",3
"lib1","SARS-CoV-2","AAAAGGTACGTCACTT",1,7.99,8.89,-1.87,0.31,1.74,1.13,0.03,">1 nonsynonymous","N4P Q176R K198M",3
"lib1","SARS-CoV-2","AAAAGGTACTACTGAC",2,3.65,NA,NA,NA,NA,NA,NA,"stop","R25* F47V D90S Y175I",4
"lib1","SARS-CoV-2","AAAAGGTAGAACAATC",5,40.71,10.67,-0.1,0.05,2.94,1,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","AAAAGGTAGTGATACG",11,80.46,10.65,-0.11,0.06,2.94,1.01,0,">1 nonsynonymous","T46V G83M",2
"lib1","SARS-CoV-2","AAAAGGTATCCCTAAA",1,32.33,10.91,0.15,0.1,2.95,1.02,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","AAAAGGTATTAAATAA",2,46.67,10.33,-0.43,0.09,2.79,1.04,0,"1 nonsynonymous","E10C",1
"lib1","SARS-CoV-2","AAAAGGTCCCGAACAA",3,107.26,10.62,-0.15,0.04,2.91,1.05,0,"1 nonsynonymous","E141L",1
"lib1","SARS-CoV-2","AAAAGGTCCTGACAAT",4,18.21,6.05,-4.72,2,1.5,1.25,0.06,">1 nonsynonymous","K56M C61N V103W I138S A145I N171Y",6
"lib1","SARS-CoV-2","AAAAGGTGGAATATCA",2,35.77,8.63,-2.14,0.37,1.5,1,0.06,">1 nonsynonymous","W23D N107F E141Q P197S",4
"lib1","SARS-CoV-2","AAAAGGTTACACCACA",2,16.98,10.7,-0.07,0.07,2.67,1.31,0,">1 nonsynonymous","L5D K56G S147P V173N K199V",5
"lib1","SARS-CoV-2","AAAAGGTTGTCACAAC",1,16.72,8.29,-2.47,0.2,1.5,1,0.02,">1 nonsynonymous","R127N R136F",2
"lib1","SARS-CoV-2","AAAAGTAAAAATAGCG",1,35.8,6.12,-4.65,0.63,1.5,1.1,0.01,">1 nonsynonymous","G86M C158Q",2
"lib1","SARS-CoV-2","AAAAGTAAATAATGAC",1,16.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28Q S69E",2
"lib1","SARS-CoV-2","AAAAGTAACATGTTAG",3,84.07,10.68,-0.08,0.06,2.91,1.05,0,">1 nonsynonymous","L5K I80V",2
"lib1","SARS-CoV-2","AAAAGTAACTATTTGA",1,12.18,9.94,-0.83,0.06,2.67,1.03,0,">1 nonsynonymous","I2D N40H L57D",3
"lib1","SARS-CoV-2","AAAAGTAACTCAAGTT",2,10.99,10.53,-0.23,0.17,2.75,1.25,0.01,"1 nonsynonymous","F44Y",1
"lib1","SARS-CoV-2","AAAAGTAAGAGAAAAA",3,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H L60F R73E L95P",4
"lib1","SARS-CoV-2","AAAAGTAATCTAGAGC",11,145.28,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P82F Y123V",2
"lib1","SARS-CoV-2","AAAAGTAATGGGTATC",5,25.16,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","C61G G86I D97R W106R T201I",5
"lib1","SARS-CoV-2","AAAAGTACACGACCAG",1,22.65,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","W106C Y119T V180Y",3
"lib1","SARS-CoV-2","AAAAGTACAGATAGAA",8,47.85,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V77T V180K",2
"lib1","SARS-CoV-2","AAAAGTACAGTTACAA",1,19.76,8.66,-2.1,0.26,1.62,1.06,0.04,">1 nonsynonymous","A14M Y39R Y123A S164F",4
"lib1","SARS-CoV-2","AAAAGTACATTACGTC",6,33.22,10.67,-0.1,0.04,2.98,1,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","AAAAGTACTCCTTGTC",1,25.23,6.86,-3.91,0.38,1.5,1.11,0.03,">1 nonsynonymous","C6F Y93V I138S",3
"lib1","SARS-CoV-2","AAAAGTACTTGTATAC",14,164.42,10.76,-0.01,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGTAGATTACAAA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S T55V A89I D98S K128L",5
"lib1","SARS-CoV-2","AAAAGTAGCATTGTAT",8,43.67,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V11N D68R G86T L95C Q144C",5
"lib1","SARS-CoV-2","AAAAGTAGTAAAAAAT",1,13.99,9.71,-1.06,0.12,2.38,1.07,0.01,">1 nonsynonymous","R127G E141N N151K",3
"lib1","SARS-CoV-2","AAAAGTAGTAACACAG",3,61.39,10.74,-0.03,0.03,2.94,1,0,"1 nonsynonymous","G152Y",1
"lib1","SARS-CoV-2","AAAAGTATATGCATTG",8,115.14,10.73,-0.04,0.05,2.9,1.07,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AAAAGTATCAGCAAAA",2,47.25,6,-4.76,2,1.87,1.15,0,">1 nonsynonymous","C31T L122R Y143K",3
"lib1","SARS-CoV-2","AAAAGTATGAAAACCA",3,39.52,10.66,-0.1,0.1,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGTATGAAGTGAG",3,41.37,9.44,-1.33,0.14,1.88,1.23,0.01,">1 nonsynonymous","T3R S43M G86S",3
"lib1","SARS-CoV-2","AAAAGTATGACAAAAC",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K G51R L60R Q176K",4
"lib1","SARS-CoV-2","AAAAGTATGGTGAGCA",3,31.11,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","E10V F134Y C158I",3
"lib1","SARS-CoV-2","AAAAGTATTCAGACGC",2,38.12,10.46,-0.31,0.09,2.88,1.02,0,">1 nonsynonymous","C61N G116S",2
"lib1","SARS-CoV-2","AAAAGTATTCTTCGGT",11,156.61,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F44D A89D Y165V G172T T201S",5
"lib1","SARS-CoV-2","AAAAGTCAAAACTCAT",7,83.63,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","W23G S36W C49N",3
"lib1","SARS-CoV-2","AAAAGTCAACGCCGTA",3,12.29,6.38,-4.38,0.5,3,1.08,0.01,">1 nonsynonymous","R78S D112M V181T",3
"lib1","SARS-CoV-2","AAAAGTCACCATGCGT",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95N L122G",2
"lib1","SARS-CoV-2","AAAAGTCACGCGACGC",2,14.92,8.11,-2.65,0.22,1.78,1.2,0.02,">1 nonsynonymous","A18Q P54I N107H",3
"lib1","SARS-CoV-2","AAAAGTCAGACGTGCA",3,31.94,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L95M F99N",2
"lib1","SARS-CoV-2","AAAAGTCAGTTATGAT",1,43.1,10.71,-0.06,0.04,2.94,1.04,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","AAAAGTCATAAAATTT",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y L122K",2
"lib1","SARS-CoV-2","AAAAGTCCATAGATAC",3,30.13,8.32,-2.44,0.23,1.5,1.12,0.02,">1 nonsynonymous","V20S Y91L G174P",3
"lib1","SARS-CoV-2","AAAAGTCCATTACTAT",4,58.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92S S139C F160D T201H",4
"lib1","SARS-CoV-2","AAAAGTCCCATTATAC",3,7.31,9.68,-1.08,0.26,1.84,1.11,0.04,">1 nonsynonymous","G9Q P82N",2
"lib1","SARS-CoV-2","AAAAGTCCGTTCCAGG",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P D90L R124K S200F",4
"lib1","SARS-CoV-2","AAAAGTCGAGAAATTT",4,59.95,9.28,-1.49,0.13,1.94,1.09,0.01,">1 nonsynonymous","F12Q A42T V173Y",3
"lib1","SARS-CoV-2","AAAAGTCGCCTTTCTT",2,57.49,10.6,-0.16,0.04,2.95,1.01,0,">1 nonsynonymous","R27T F134S",2
"lib1","SARS-CoV-2","AAAAGTCGCTTTAATT",3,189.16,10.6,-0.17,0.07,2.86,1.11,0,">1 nonsynonymous","L60F R78K A192V P197A",4
"lib1","SARS-CoV-2","AAAAGTCTAAAGATCG",3,8.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N107P S129Q D137S G166L A190C",5
"lib1","SARS-CoV-2","AAAAGTCTAGCGACAG",1,10.57,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S41R L95Q T140P C150G Y165R",5
"lib1","SARS-CoV-2","AAAAGTCTGTGCGATC",2,16.46,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N64D V77G R124V",3
"lib1","SARS-CoV-2","AAAAGTCTTAACAAAG",8,0.35,NA,NA,NA,NA,NA,NA,"stop","P7* D59T K87H Y121V",4
"lib1","SARS-CoV-2","AAAAGTGAAGCGACCA",4,17.12,10.4,-0.36,0.1,2.98,1,0,">1 nonsynonymous","T46V S129N F156A",3
"lib1","SARS-CoV-2","AAAAGTGAAGTGTTGC",5,81.06,9.55,-1.22,0.11,1.92,1.15,0,">1 nonsynonymous","E10A W106K F160P",3
"lib1","SARS-CoV-2","AAAAGTGAGCATTATC",2,35.46,10.29,-0.47,0.08,2.81,1,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","AAAAGTGATATTGCTA",4,77.86,10.75,-0.01,0.05,2.94,1.02,0,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","AAAAGTGATTCAGCAT",4,0.34,NA,NA,NA,NA,NA,NA,"stop","V32L Y119M G166*",3
"lib1","SARS-CoV-2","AAAAGTGCATTAACGA",2,273.5,8.68,-2.09,0.09,2.87,1.06,0,">1 nonsynonymous","P7N K48R Q176E",3
"lib1","SARS-CoV-2","AAAAGTGCCAACCAAG",2,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C49H K87G",3
"lib1","SARS-CoV-2","AAAAGTGCCCCGATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y Y39Q K56V P96E S139M",5
"lib1","SARS-CoV-2","AAAAGTGCCTTCCAAC",7,63.14,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G116N G174K V180E",3
"lib1","SARS-CoV-2","AAAAGTGGGATCATCG",6,32.38,6.2,-4.56,0.61,1.5,1.14,0.01,">1 nonsynonymous","P82R N107M K132F",3
"lib1","SARS-CoV-2","AAAAGTGTAACTTTCC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","K48L P54* C61R I88M T140D G146W",6
"lib1","SARS-CoV-2","AAAAGTGTCTATTGAA",1,20.32,10.79,0.02,0.07,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAAGTGTGCACAATG",2,68.92,10.71,-0.05,0.05,2.97,1.01,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","AAAAGTTAAAACTACT",3,42.26,10.29,-0.47,0.06,2.87,1.04,0,">1 nonsynonymous","S43D Q84H V153G",3
"lib1","SARS-CoV-2","AAAAGTTAACTCTAAT",2,92.35,10.24,-0.52,0.05,2.77,1.07,0,">1 nonsynonymous","S53Y N64T F160L",3
"lib1","SARS-CoV-2","AAAAGTTAATAACAAT",5,83.07,8.91,-1.86,0.1,2.3,1.1,0,">1 nonsynonymous","P7I R73S",2
"lib1","SARS-CoV-2","AAAAGTTAGCAACGTA",6,32.5,8.49,-2.27,0.17,1.5,1.1,0.01,">1 nonsynonymous","V11C N58T D90A",3
"lib1","SARS-CoV-2","AAAAGTTCACCGTGCC",1,8.51,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","K56P R179D T201M",3
"lib1","SARS-CoV-2","AAAAGTTCACTAATGG",3,23.25,10.4,-0.37,0.13,2.75,1,0.01,">1 nonsynonymous","S45G L60G",2
"lib1","SARS-CoV-2","AAAAGTTCCTATTAGG",2,9,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V32G L38T F62W L131S Y175C K198P",6
"lib1","SARS-CoV-2","AAAAGTTCGTAAATAA",5,50.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45M G83I A145N K198R",4
"lib1","SARS-CoV-2","AAAAGTTCTATCCTAA",5,53.78,10.67,-0.1,0.06,2.92,1.04,0,">1 nonsynonymous","T3P L122K V181L P197V",4
"lib1","SARS-CoV-2","AAAAGTTGAGAGCAAG",1,8.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17I I88N K132G",3
"lib1","SARS-CoV-2","AAAAGTTGCATGAACT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","E10F V103N S129*",3
"lib1","SARS-CoV-2","AAAAGTTGCGCAACCC",8,37.13,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C31D K94D L183A",3
"lib1","SARS-CoV-2","AAAAGTTGGTCGAAAA",3,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26D N40A T55I Y93L",4
"lib1","SARS-CoV-2","AAAAGTTGGTTCTAAA",7,79.28,10.12,-0.65,0.05,2.83,1,0,">1 nonsynonymous","Y121K S184C T201I",3
"lib1","SARS-CoV-2","AAAAGTTTAAAATACT",4,0.25,NA,NA,NA,NA,NA,NA,"stop","A14S W23* G155V",3
"lib1","SARS-CoV-2","AAAAGTTTAAGCGCGG",5,6.37,NA,NA,NA,NA,NA,NA,"stop","V37* G155V T201E",3
"lib1","SARS-CoV-2","AAAAGTTTAATTTACT",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I Y35S A42H K87S Q144I",5
"lib1","SARS-CoV-2","AAAAGTTTGACTACTC",1,31.19,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","K94P S113K T170N",3
"lib1","SARS-CoV-2","AAAAGTTTGTGAGCGA",5,56.67,10.57,-0.19,0.06,2.84,1.09,0,">1 nonsynonymous","S45C L122S",2
"lib1","SARS-CoV-2","AAAAGTTTTGACGCCA",6,1386.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12P K48V L95W",3
"lib1","SARS-CoV-2","AAAAGTTTTGATGTCA",2,24.65,10.5,-0.27,0.09,2.87,1.05,0,">1 nonsynonymous","A42P T46K",2
"lib1","SARS-CoV-2","AAAAGTTTTGTTATAT",9,45.13,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I80C N151W N157I",3
"lib1","SARS-CoV-2","AAAATAAAAAAAGATC",4,50.65,9.27,-1.49,0.36,1.5,1,0.06,">1 nonsynonymous","T63S G116M Y121E",3
"lib1","SARS-CoV-2","AAAATAAAAAGAACAT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","Y35* I104T L131* N151S",4
"lib1","SARS-CoV-2","AAAATAAAAATACAAA",3,22.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19W K87W N107P E141Y T170E S184H",6
"lib1","SARS-CoV-2","AAAATAAAACAACACA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W Y91L T170R",3
"lib1","SARS-CoV-2","AAAATAAAACAAGCAA",2,21.55,9.39,-1.37,0.11,2.7,1.1,0,">1 nonsynonymous","S43P C61V V115W G174T S200Y",5
"lib1","SARS-CoV-2","AAAATAAAACGGGACC",3,19.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K26G N58L G116Q",3
"lib1","SARS-CoV-2","AAAATAAAATACAACT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","S69* G116R Q144T F156M",4
"lib1","SARS-CoV-2","AAAATAAAATATGGTG",1,42.2,10.14,-0.63,0.12,2.67,1.08,0.01,">1 nonsynonymous","N1R Q79M",2
"lib1","SARS-CoV-2","AAAATAAAATCCTAAG",3,80.88,10.05,-0.71,0.12,2.04,1.08,0.01,">1 nonsynonymous","T15I G83E",2
"lib1","SARS-CoV-2","AAAATAAAATCGAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","A42L T55D D68* Y93K Y165*",5
"lib1","SARS-CoV-2","AAAATAAAATTAATAA",3,45.97,10.64,-0.13,0.03,2.97,1,0,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","AAAATAAAATTGGTCA",7,2.44,NA,NA,NA,NA,NA,NA,"stop","N4* F70Q L95N Y175T",4
"lib1","SARS-CoV-2","AAAATAAACACGAAAG",3,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V G86M K94N C102I T170Y",5
"lib1","SARS-CoV-2","AAAATAAACCACTCAA",6,4.56,NA,NA,NA,NA,NA,NA,"stop","R16T L38* S139R L188R",4
"lib1","SARS-CoV-2","AAAATAAACCCAATTC",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H C102G",2
"lib1","SARS-CoV-2","AAAATAAACCCTGTCC",1,14.65,8.52,-2.24,0.27,1.99,1.05,0.02,">1 nonsynonymous","Y93F F156C",2
"lib1","SARS-CoV-2","AAAATAAACGAAGTAG",2,51.27,10.64,-0.12,0.08,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAAACGATTGAA",17,586.68,9.97,-0.79,0.04,2.9,1.02,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","AAAATAAACGTCCATA",1,17.1,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N4L D98S V103W",3
"lib1","SARS-CoV-2","AAAATAAAGACGGATG",2,22.37,10.77,0.01,0.09,2.82,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAAAGGCTACTT",5,79.22,10.44,-0.32,0.05,2.9,1.01,0,"1 nonsynonymous","F156I",1
"lib1","SARS-CoV-2","AAAATAAATACAAGTG",2,47.78,9.99,-0.78,0.1,2.71,1.02,0,">1 nonsynonymous","D59F Y91M S200L",3
"lib1","SARS-CoV-2","AAAATAAATGGGGAAA",6,78.43,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","R27G Y50C L95Q T170Q R179S",5
"lib1","SARS-CoV-2","AAAATAAATTACACGG",2,6.32,6.39,-4.38,0.86,1.5,1.12,0.01,">1 nonsynonymous","F70L W106A C150T",3
"lib1","SARS-CoV-2","AAAATAAATTGCCAGC",2,10.76,6.27,-4.5,0.75,3,1.23,0.02,">1 nonsynonymous","D59N D90Y F99Y A105K",4
"lib1","SARS-CoV-2","AAAATAAATTGGAAAA",4,67.4,10.71,-0.05,0.08,2.96,1.02,0,"1 nonsynonymous","F134M",1
"lib1","SARS-CoV-2","AAAATAAATTTGTCGA",6,45.81,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L5S V77K F99N N118V Q176R",5
"lib1","SARS-CoV-2","AAAATAACAAAAAGGT",3,98.62,10.3,-0.47,0.04,2.81,1.06,0,">1 nonsynonymous","E10R T148N T201R",3
"lib1","SARS-CoV-2","AAAATAACAAGTATTC",1,39.55,8.54,-2.23,0.21,2.03,1.17,0.02,">1 nonsynonymous","F44S C61L Y143L",3
"lib1","SARS-CoV-2","AAAATAACAGAAATAC",2,37.46,10.73,-0.04,0.14,2.84,1.07,0.01,">1 nonsynonymous","F8L D98T",2
"lib1","SARS-CoV-2","AAAATAACATAATTTT",1,21.74,10.78,0.02,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAACATCACTAT",2,34.82,10.39,-0.37,0.06,2.79,1.17,0,">1 nonsynonymous","L5G F160V",2
"lib1","SARS-CoV-2","AAAATAACGATTCGTT",16,117.71,6.08,-4.68,0.74,1.5,1.19,0.01,">1 nonsynonymous","Y21A G101Y",2
"lib1","SARS-CoV-2","AAAATAACTACCCGAA",1,10.88,10.89,0.13,0.09,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAATAACTATTGTCA",3,23.11,8.59,-2.17,0.17,2.32,1.13,0.01,">1 nonsynonymous","E141R Y175S",2
"lib1","SARS-CoV-2","AAAATAACTGTTTAGC",5,77.24,10.7,-0.06,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAACTTCTTACA",2,30.62,6,-4.76,2,1.5,1.44,0.08,">1 nonsynonymous","S45R G101A Y165S P177S",4
"lib1","SARS-CoV-2","AAAATAACTTTGGGGA",2,13.05,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L38F P96L G117I K128P F185L K198M",6
"lib1","SARS-CoV-2","AAAATAACTTTTGCAT",11,64.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37S C49G I88S V103I K128I C158R",6
"lib1","SARS-CoV-2","AAAATAAGACATTAAA",11,194.92,10.18,-0.58,0.05,2.78,1.02,0,">1 nonsynonymous","T3I S139D G155S",3
"lib1","SARS-CoV-2","AAAATAAGACTTATAT",4,59.76,10.03,-0.73,0.09,2.9,1,0,">1 nonsynonymous","F12L T148C",2
"lib1","SARS-CoV-2","AAAATAAGCGAACATA",2,1.56,NA,NA,NA,NA,NA,NA,"stop","T55N K87S E154Y K198*",4
"lib1","SARS-CoV-2","AAAATAAGGACTTGAC",2,15.09,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","A14K E76R R136S",3
"lib1","SARS-CoV-2","AAAATAAGGATAAAGT",3,24.23,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K56V F99S L122R",3
"lib1","SARS-CoV-2","AAAATAAGGATGAGTA",1,46.99,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S29M K48F I104F L131R S147I",5
"lib1","SARS-CoV-2","AAAATAAGGTAAGTGG",5,104.86,10.65,-0.11,0.05,2.9,1.06,0,"1 nonsynonymous","K87F",1
"lib1","SARS-CoV-2","AAAATAAGTACTTTAT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","Y39L K87* G155P",3
"lib1","SARS-CoV-2","AAAATAAGTCCATAAA",4,13.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L T140L K198R",3
"lib1","SARS-CoV-2","AAAATAATAAAATCCC",2,11.46,7.71,-3.06,0.53,1.5,1.06,0.03,">1 nonsynonymous","C6S S53A L60Y W106R P149I T201Q",6
"lib1","SARS-CoV-2","AAAATAATAACCCTAT",4,97.05,9.17,-1.6,0.09,2.77,1.14,0,">1 nonsynonymous","N40P Y119G K199N",3
"lib1","SARS-CoV-2","AAAATAATAAGTCAAG",5,17.17,6.76,-4,0.56,1.5,1.1,0.04,">1 nonsynonymous","C61R D68K V173G",3
"lib1","SARS-CoV-2","AAAATAATAATACTGC",5,70.53,6,-4.76,2,3,1.19,0,">1 nonsynonymous","N4T C31K Y119L S139N E154C Q176C",6
"lib1","SARS-CoV-2","AAAATAATAATCTACG",2,50.58,10.24,-0.53,0.07,2.24,1,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","AAAATAATATAATCCT",5,8.47,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","C6R D59A G83I P96L R136L N151F Q168L",7
"lib1","SARS-CoV-2","AAAATAATCCTACAAA",12,131.51,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35E Y91C I104P T201Y",4
"lib1","SARS-CoV-2","AAAATAATCTAAGAGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","V11H C61* K128H I138N",4
"lib1","SARS-CoV-2","AAAATAATTGATTTAA",4,20.81,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15V N92K I142N",3
"lib1","SARS-CoV-2","AAAATAATTTCCGTAG",4,149.79,10.77,0.01,0.07,2.89,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAATACAAAGACACA",1,10.02,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V11G G51Y F62L K128L",4
"lib1","SARS-CoV-2","AAAATACAAGACATAG",4,68.85,10.53,-0.24,0.04,2.93,1.02,0,"1 nonsynonymous","E154M",1
"lib1","SARS-CoV-2","AAAATACAATAGTAGA",7,105.48,9.87,-0.89,0.11,2.02,1.09,0.01,">1 nonsynonymous","N40P E135T F160G",3
"lib1","SARS-CoV-2","AAAATACACACTAAAC",23,299.04,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","N30W C158Y F160P",3
"lib1","SARS-CoV-2","AAAATACACCACCGCG",1,10.34,10.8,0.04,0.06,3,1.02,0,">1 nonsynonymous","T55K T148F",2
"lib1","SARS-CoV-2","AAAATACAGAATTTGG",1,34.57,10.56,-0.2,0.1,2.97,1,0,">1 nonsynonymous","C61N T100R",2
"lib1","SARS-CoV-2","AAAATACAGAGACGGA",1,26.82,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Q144V G172K",2
"lib1","SARS-CoV-2","AAAATACAGAGTGGTA",3,42.74,10.55,-0.22,0.05,2.87,1.05,0,">1 nonsynonymous","E135G F160R T201L",3
"lib1","SARS-CoV-2","AAAATACAGCATGGAG",3,132.12,8.77,-2,0.12,1.91,1.11,0.01,">1 nonsynonymous","I138S Q176L",2
"lib1","SARS-CoV-2","AAAATACAGCCGACGA",9,159.98,10.56,-0.21,0.04,2.9,1.04,0,">1 nonsynonymous","V37I F44K",2
"lib1","SARS-CoV-2","AAAATACAGGGGGGCA",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","AAAATACAGGTCTGTG",1,18.95,9.19,-1.57,0.1,2.73,1.12,0,">1 nonsynonymous","G117N T201V",2
"lib1","SARS-CoV-2","AAAATACAGTGTTTAG",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L Y93A",2
"lib1","SARS-CoV-2","AAAATACATAATCACA",6,80.12,8.87,-1.89,0.18,1.5,1.1,0.01,">1 nonsynonymous","L38H D59P T100K",3
"lib1","SARS-CoV-2","AAAATACATAGAACTT",5,108.42,10.82,0.05,0.03,2.94,1.02,0,"1 nonsynonymous","Q84S",1
"lib1","SARS-CoV-2","AAAATACATAGGTTAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","AAAATACATATTCACA",6,49.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V52S G86R A105N",3
"lib1","SARS-CoV-2","AAAATACATCCCTTTA",5,67.46,10.03,-0.74,0.11,2.32,1.03,0.01,">1 nonsynonymous","G9T I104S N130R",3
"lib1","SARS-CoV-2","AAAATACATGAGCGAT",4,39.27,10.71,-0.05,0.04,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATACATTGAGAAC",1,0.9,NA,NA,NA,NA,NA,NA,"stop","S29T V37* L131Y",3
"lib1","SARS-CoV-2","AAAATACCAACGGAAC",9,58.83,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C31L G86D V103R Q144F",4
"lib1","SARS-CoV-2","AAAATACCAAGTCAAT",2,50.11,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2T Y66E F99C Y175F Y178Q",5
"lib1","SARS-CoV-2","AAAATACCAATAAATG",3,2.66,NA,NA,NA,NA,NA,NA,"stop","R78S K87* Y123D",3
"lib1","SARS-CoV-2","AAAATACCCGGTCAAG",2,11.38,8.13,-2.63,0.13,2.31,1.06,0.01,">1 nonsynonymous","L5F V32R Y143S",3
"lib1","SARS-CoV-2","AAAATACCCTAATTAT",4,3.87,NA,NA,NA,NA,NA,NA,"stop","Y50I E154* R179V",3
"lib1","SARS-CoV-2","AAAATACCCTTGGTTC",6,29.43,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C61M Y93G P149R Y175V",4
"lib1","SARS-CoV-2","AAAATACCGTGTGGTT",4,55.62,8.31,-2.45,0.27,1.71,1.09,0.03,">1 nonsynonymous","S43F G83I G166W T201W",4
"lib1","SARS-CoV-2","AAAATACCTTAACGTA",8,86.18,9.12,-1.65,0.09,2.32,1.07,0,">1 nonsynonymous","V52C K56W Q168M",3
"lib1","SARS-CoV-2","AAAATACCTTAGTGCG",1,18.23,10.87,0.11,0.13,2.97,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAATACGAAAACGAG",3,28.08,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","T3S L95M S113M Y119L",4
"lib1","SARS-CoV-2","AAAATACGAATTACGT",4,67.12,9.49,-1.28,0.12,1.92,1.08,0.01,">1 nonsynonymous","F8G V37T N120S",3
"lib1","SARS-CoV-2","AAAATACGCTCAAGCA",2,18.95,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","K56S P82R D112E L122N",4
"lib1","SARS-CoV-2","AAAATACTAACAAACT",11,81.34,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G51T F99R S139T",3
"lib1","SARS-CoV-2","AAAATACTACGTACAT",1,12.25,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F12N C61Y K94E G146Q",4
"lib1","SARS-CoV-2","AAAATACTAGCGGAAA",2,124.01,10.55,-0.21,0.06,2.87,1.04,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","AAAATACTATGATCAA",2,10.68,9.44,-1.33,0.12,2.99,1,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","AAAATACTGCTTCTAG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","AAAATACTGGTACCAT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","L5* T46A Y91I",3
"lib1","SARS-CoV-2","AAAATACTTAACGAAG",7,67.49,6,-4.76,1.66,1.5,1.14,0.01,">1 nonsynonymous","V20E K56R",2
"lib1","SARS-CoV-2","AAAATACTTAACGTAG",4,46.85,8.39,-2.37,0.33,1.5,1.24,0.04,">1 nonsynonymous","I104H Y119C",2
"lib1","SARS-CoV-2","AAAATACTTCCTCTAA",5,31.27,10.47,-0.29,0.11,2.89,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAATACTTTAGTCAT",1,8.18,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I104G K114N N118A G146V C195S",5
"lib1","SARS-CoV-2","AAAATAGAAAACTTTT",5,69.34,10.56,-0.2,0.05,2.89,1.08,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","AAAATAGAAAATAGCA",6,57.23,6.07,-4.69,1.09,1.5,1.17,0.02,">1 nonsynonymous","F70Y Y119I",2
"lib1","SARS-CoV-2","AAAATAGAAACAGAAC",2,8.87,9.84,-0.92,0.14,2,1.05,0.01,">1 nonsynonymous","S29R V71T A105T",3
"lib1","SARS-CoV-2","AAAATAGAAACATACG",1,0,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","AAAATAGAACAGTGTT",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131Y T140Q F160T T170L",4
"lib1","SARS-CoV-2","AAAATAGAACATCATA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","S41C R124T E141*",3
"lib1","SARS-CoV-2","AAAATAGAATTTCTCA",1,12.29,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","T3A A14V A33H G86M",4
"lib1","SARS-CoV-2","AAAATAGACATTGCAA",6,120.45,10.79,0.03,0.06,2.9,1.04,0,"1 nonsynonymous","S43H",1
"lib1","SARS-CoV-2","AAAATAGACATTTGCT",3,46.61,9.81,-0.95,0.08,2.67,1.12,0,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","AAAATAGACTGAAGCT",2,43.29,10.1,-0.66,0.12,2.41,1,0.01,">1 nonsynonymous","D34V P149R K198S",3
"lib1","SARS-CoV-2","AAAATAGAGACAGCTT",10,159.21,10.06,-0.71,0.07,2.43,1.02,0,">1 nonsynonymous","F44M T100A",2
"lib1","SARS-CoV-2","AAAATAGAGTTTTGAT",6,24.66,9.86,-0.91,0.12,1.96,1.05,0.01,">1 nonsynonymous","N13R E135S",2
"lib1","SARS-CoV-2","AAAATAGCAAAAATAA",7,0.81,NA,NA,NA,NA,NA,NA,"stop","D112R R127Q P161* T201S",4
"lib1","SARS-CoV-2","AAAATAGCAAAATAAA",5,52.33,9.65,-1.11,0.08,1.93,1.09,0,">1 nonsynonymous","A14C N58F",2
"lib1","SARS-CoV-2","AAAATAGCACTACACC",3,41.35,10.73,-0.04,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAGCATGACGTA",1,11.87,10.75,-0.01,0.12,2.86,1.06,0.01,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","AAAATAGCCAGTAAAA",2,106.75,10.08,-0.68,0.07,2.76,1.03,0,">1 nonsynonymous","E141S P161S",2
"lib1","SARS-CoV-2","AAAATAGCGCAGACAA",5,63.44,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","L5V I28E S29N N58R K128H R136P",6
"lib1","SARS-CoV-2","AAAATAGCTCATTAAG",1,7.11,7.15,-3.61,0.52,1.5,1.14,0.06,">1 nonsynonymous","V37L G86H I104Y N157Q",4
"lib1","SARS-CoV-2","AAAATAGCTGTTACGT",2,30.28,10.05,-0.71,0.09,1.98,1.1,0,">1 nonsynonymous","A14N L57W D90S",3
"lib1","SARS-CoV-2","AAAATAGGAAAAACTT",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L V103S N130L",3
"lib1","SARS-CoV-2","AAAATAGGATTTGGAA",1,10.03,6,-4.76,0.81,1.5,1.04,0,">1 nonsynonymous","L5A P133H F167L",3
"lib1","SARS-CoV-2","AAAATAGGCTTAACAC",15,176.22,10.72,-0.04,0.05,2.95,1,0,"1 nonsynonymous","A18D",1
"lib1","SARS-CoV-2","AAAATAGGGGAAAGTT",2,8.37,7.02,-3.74,0.62,1.5,1.06,0.06,">1 nonsynonymous","I28Y N58K N64R P96F N118A C150R",6
"lib1","SARS-CoV-2","AAAATAGGTTATGATA",1,28.27,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S29E Y121F P133L T140P C158S Y175F R179K",7
"lib1","SARS-CoV-2","AAAATAGTAAAATAAC",2,12.61,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D112C N130S Q176P",3
"lib1","SARS-CoV-2","AAAATAGTAAACTGGA",11,190.79,10.36,-0.4,0.05,2.88,1.01,0,">1 nonsynonymous","S36Q N58Y T201Q",3
"lib1","SARS-CoV-2","AAAATAGTAACAGAAC",3,73.85,6,-4.76,0.74,1.5,1.13,0,">1 nonsynonymous","L57S Y93S",2
"lib1","SARS-CoV-2","AAAATAGTACAATTAG",1,36.71,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G9R K87Y W106G Y165F",4
"lib1","SARS-CoV-2","AAAATAGTACGTCATC",2,15.28,9.89,-0.87,0.08,2.88,1.04,0,">1 nonsynonymous","P149T G174W",2
"lib1","SARS-CoV-2","AAAATAGTCAAATGTC",6,49.65,6.74,-4.02,0.29,1.5,1.13,0.02,">1 nonsynonymous","W23K R124S",2
"lib1","SARS-CoV-2","AAAATAGTCAGGCTAG",4,111.05,10.74,-0.02,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATAGTCGTTCAAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A C61H D90P N157T V182M",5
"lib1","SARS-CoV-2","AAAATAGTCTATCAAG",4,40.77,10.46,-0.31,0.06,2.93,1.03,0,">1 nonsynonymous","N40A K87L",2
"lib1","SARS-CoV-2","AAAATAGTTTAAAGGG",1,1.85,NA,NA,NA,NA,NA,NA,"stop","Y119* N157S",2
"lib1","SARS-CoV-2","AAAATATAAAGATGGA",7,190.01,9.98,-0.79,0.1,2.19,1.05,0,">1 nonsynonymous","T63L S139L",2
"lib1","SARS-CoV-2","AAAATATAAATTCCAT",9,103.08,10.05,-0.72,0.11,2.08,1.08,0,">1 nonsynonymous","G9S F47K D90N",3
"lib1","SARS-CoV-2","AAAATATAACAAGCAC",8,0.82,NA,NA,NA,NA,NA,NA,"stop","S41N Y91C G155*",3
"lib1","SARS-CoV-2","AAAATATAACACACCA",2,16.3,10.73,-0.03,0.09,2.94,1.03,0,">1 nonsynonymous","D97T K198I",2
"lib1","SARS-CoV-2","AAAATATAACACGAAA",12,167.25,8.45,-2.32,0.14,2.39,1.11,0.01,">1 nonsynonymous","D59E N120S Y175V",3
"lib1","SARS-CoV-2","AAAATATACAAGTGGA",3,0.94,NA,NA,NA,NA,NA,NA,"stop","T15V G101* G155E G166A",4
"lib1","SARS-CoV-2","AAAATATACTCAAGAA",2,15.45,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14G T55M T63I G86M L95N T201R",6
"lib1","SARS-CoV-2","AAAATATAGAGGCAGG",5,35.65,6,-4.76,2,1.5,1.23,0.08,">1 nonsynonymous","V37F C61R D90I N171I Y178P",5
"lib1","SARS-CoV-2","AAAATATAGTAAGAAC",1,21.67,9.04,-1.72,0.15,2.09,1.14,0.01,">1 nonsynonymous","I104Y G116F G155W",3
"lib1","SARS-CoV-2","AAAATATATATACGAT",6,129.89,10.21,-0.56,0.08,2.67,1.02,0,">1 nonsynonymous","N110C I138P S164H",3
"lib1","SARS-CoV-2","AAAATATATGGCCCAA",5,53.68,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V11P V32A S69Q A145F F160L F185I",6
"lib1","SARS-CoV-2","AAAATATATGTGTAAA",1,26.07,10.58,-0.19,0.07,2.88,1.08,0,">1 nonsynonymous","T63V Q168R P197S T201A",4
"lib1","SARS-CoV-2","AAAATATCACGAGCGA",1,7.35,10.69,-0.07,0.09,2.77,1.19,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAATATCCCCTGGAT",9,197.66,10.57,-0.19,0.04,2.9,1.05,0,">1 nonsynonymous","I2P N64I I104L",3
"lib1","SARS-CoV-2","AAAATATCCTCGATAA",4,0.42,NA,NA,NA,NA,NA,NA,"stop","F44Q L131* Y165*",3
"lib1","SARS-CoV-2","AAAATATCGAAACGTA",3,3.37,NA,NA,NA,NA,NA,NA,"stop","V11G K26E Y35E A89* P96K",5
"lib1","SARS-CoV-2","AAAATATCTAGCGGTT",3,50.28,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T3L F17V T63L Y119C T140I",5
"lib1","SARS-CoV-2","AAAATATCTGCGTACA",7,160.52,10.67,-0.09,0.04,2.88,1.06,0,">1 nonsynonymous","I104L N120S T201R",3
"lib1","SARS-CoV-2","AAAATATGAACGTAGT",3,10.34,6,-4.76,2,3,1.12,0,">1 nonsynonymous","N1L V11G P82V D97V C158E",5
"lib1","SARS-CoV-2","AAAATATGAAGTATGC",11,60.25,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W23A V103Q K128M",3
"lib1","SARS-CoV-2","AAAATATGAATAGACA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9R S41P K48S C61V Q168G F185R A192*",7
"lib1","SARS-CoV-2","AAAATATGAGCACATA",2,7.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K26H Y93S I104G Y178P",4
"lib1","SARS-CoV-2","AAAATATGATCACAAG",6,80.91,9.35,-1.41,0.15,1.83,1.11,0.01,">1 nonsynonymous","G86S P149S",2
"lib1","SARS-CoV-2","AAAATATGCAGGCGTG",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H S41C I80V F99L",4
"lib1","SARS-CoV-2","AAAATATGGACAAACG",3,58.97,8.68,-2.09,0.17,1.5,1.05,0.02,">1 nonsynonymous","Y35V D137A",2
"lib1","SARS-CoV-2","AAAATATGGGCCATTG",1,10.18,6,-4.76,2,3,1.1,0.01,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","AAAATATGTTAGCCTT",2,111.36,10.37,-0.4,0.05,2.79,1.07,0,">1 nonsynonymous","D34C T201S",2
"lib1","SARS-CoV-2","AAAATATTACAAATTA",7,64.08,9.97,-0.8,0.1,2.41,1.07,0,">1 nonsynonymous","R16K V37Q N171Q",3
"lib1","SARS-CoV-2","AAAATATTACCGAATT",2,29.65,9.18,-1.59,0.09,2.87,1.07,0,">1 nonsynonymous","Y119S F134L",2
"lib1","SARS-CoV-2","AAAATATTAGTGAAAC",2,76.37,8.17,-2.59,0.24,1.93,1.25,0.02,">1 nonsynonymous","K128M L162V Y175S",3
"lib1","SARS-CoV-2","AAAATATTCAAGTGAT",2,74.48,6.75,-4.01,0.24,1.5,1.12,0.01,">1 nonsynonymous","T63S S147V Y175I",3
"lib1","SARS-CoV-2","AAAATATTCGACCTAA",3,20.56,8.58,-2.19,0.34,1.5,1,0.05,">1 nonsynonymous","F12L K94F N110Q",3
"lib1","SARS-CoV-2","AAAATATTGAACTTCA",4,45.74,10.62,-0.15,0.08,2.84,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATATTGATGATAA",1,13.6,9.28,-1.48,0.2,2.35,1.04,0.01,">1 nonsynonymous","C6L T55L G155R",3
"lib1","SARS-CoV-2","AAAATATTTGAAACAT",2,58.14,10.53,-0.23,0.06,2.92,1.03,0,">1 nonsynonymous","A33Y G83V",2
"lib1","SARS-CoV-2","AAAATATTTTAACTAA",3,2.07,NA,NA,NA,NA,NA,NA,"stop","N107G A145T C150S G155*",4
"lib1","SARS-CoV-2","AAAATCAAAAAACTAG",8,2.56,NA,NA,NA,NA,NA,NA,"stop","G9L Q84* E135D Y165D",4
"lib1","SARS-CoV-2","AAAATCAACAAAACCG",2,50.66,10.81,0.05,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATCAACGTAATAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","D90K D97* V153*",3
"lib1","SARS-CoV-2","AAAATCAACTAAATGT",1,26.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12Y V103A F167Y",3
"lib1","SARS-CoV-2","AAAATCAAGAAACTTT",2,67.98,10.6,-0.16,0.02,2.92,1.03,0,">1 nonsynonymous","Q84V D90R",2
"lib1","SARS-CoV-2","AAAATCAAGAGCACCA",7,8.44,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D90L V103R P149Y T201S",4
"lib1","SARS-CoV-2","AAAATCAATATGGAGG",1,6.23,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","V32R T85A G101S",3
"lib1","SARS-CoV-2","AAAATCAATTGTACTA",1,8.62,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","D98L I104Q A190T",3
"lib1","SARS-CoV-2","AAAATCACAACAGCCA",3,27.28,7.39,-3.38,0.29,1.85,1.13,0.02,">1 nonsynonymous","S41D K48I S139P",3
"lib1","SARS-CoV-2","AAAATCACAGGAATTT",5,34.7,10.71,-0.06,0.06,2.92,1.01,0,"1 nonsynonymous","Y121Q",1
"lib1","SARS-CoV-2","AAAATCACATCATGTT",8,127.69,9.08,-1.69,0.08,2.79,1.12,0,">1 nonsynonymous","S43L G117C",2
"lib1","SARS-CoV-2","AAAATCACCATACAGC",7,41.99,6.06,-4.71,1.35,1.5,1.12,0.05,">1 nonsynonymous","D68Y Y93R V181R T201I",4
"lib1","SARS-CoV-2","AAAATCACGACAACCA",4,5.4,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D34L C61L I104N E141V K198E",5
"lib1","SARS-CoV-2","AAAATCACGCTGCTTT",3,131.93,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2Q D137H P177N",3
"lib1","SARS-CoV-2","AAAATCAGAATTCGAA",11,2.29,NA,NA,NA,NA,NA,NA,"stop","V11Y I28* L122R K128S",4
"lib1","SARS-CoV-2","AAAATCAGACCGTACG",1,26.63,10.66,-0.11,0.11,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATCAGATAACATT",1,54.85,9.93,-0.83,0.08,2.27,1.04,0,">1 nonsynonymous","L57K S139T V153F",3
"lib1","SARS-CoV-2","AAAATCAGGAAAAACT",7,0.05,NA,NA,NA,NA,NA,NA,"stop","F17* Y50S L57Y L95Y V153W Q163S",6
"lib1","SARS-CoV-2","AAAATCATAAAACAAG",2,49.14,10.69,-0.07,0.06,2.96,1.03,0,">1 nonsynonymous","A18E S41K T46M L122K",4
"lib1","SARS-CoV-2","AAAATCATAATTATGA",5,83.88,10.73,-0.03,0.04,2.93,1.04,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","AAAATCATATGGTGTC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","D97L D137V C150* G155I",4
"lib1","SARS-CoV-2","AAAATCATATTCAAAT",6,135.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4I Y39V Q144N N151D Q168T Q176S",6
"lib1","SARS-CoV-2","AAAATCATCCATCTTG",2,16.03,7.48,-3.28,0.37,1.5,1.17,0.04,">1 nonsynonymous","N13R Y35E F62D F160A",4
"lib1","SARS-CoV-2","AAAATCATGCGCTCGG",4,21.06,6.67,-4.09,0.6,1.5,1.18,0.07,">1 nonsynonymous","V37F L60V T85R N120T D137H",5
"lib1","SARS-CoV-2","AAAATCATGGGCCTAA",3,62.73,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","K48S F126P E141R",3
"lib1","SARS-CoV-2","AAAATCCAACATGTAA",3,51.1,9.86,-0.9,0.14,2.21,1.01,0.01,">1 nonsynonymous","N40S T55P D90Y",3
"lib1","SARS-CoV-2","AAAATCCAACTAGCCG",1,20.75,10.44,-0.32,0.06,2.8,1.15,0,">1 nonsynonymous","S36A K128I",2
"lib1","SARS-CoV-2","AAAATCCAAGATTAGC",6,110.19,9.97,-0.8,0.06,2.44,1.03,0,">1 nonsynonymous","F44Q K128C",2
"lib1","SARS-CoV-2","AAAATCCAATAAGCTA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","T3K F47I K56Q S113R Y175*",5
"lib1","SARS-CoV-2","AAAATCCACTTGGTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S41N L60Y",3
"lib1","SARS-CoV-2","AAAATCCAGAGTCAAC",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57D F99T N171H",3
"lib1","SARS-CoV-2","AAAATCCCACAATGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","AAAATCCCACTCACCA",6,112.86,10.68,-0.08,0.08,2.87,1.09,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","AAAATCCCCAAACCAG",1,18.86,6,-4.76,2,2.69,1.11,0,">1 nonsynonymous","A14V C150R",2
"lib1","SARS-CoV-2","AAAATCCCCAAATACG",1,36.88,10.22,-0.55,0.14,2.58,1.22,0.01,">1 nonsynonymous","D34H T201N",2
"lib1","SARS-CoV-2","AAAATCCCCGATAACG",11,292.3,8.83,-1.93,0.07,2.83,1.14,0,">1 nonsynonymous","Y119H Q176M",2
"lib1","SARS-CoV-2","AAAATCCCCTTAAGCC",4,3.62,NA,NA,NA,NA,NA,NA,"stop","G9T S43P F156*",3
"lib1","SARS-CoV-2","AAAATCCCTTATCCTT",7,358.48,10.65,-0.11,0.04,2.94,1.03,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","AAAATCCGCAGTGTAT",7,82.86,8.3,-2.46,0.2,1.91,1.16,0.02,">1 nonsynonymous","I2Y S45Y T55H Y119I E186T",5
"lib1","SARS-CoV-2","AAAATCCGCCGGTGAT",1,16.62,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","A105R N157T S200N",3
"lib1","SARS-CoV-2","AAAATCCGCTTCATAC",5,50.02,8.55,-2.22,0.32,1.5,1,0.04,">1 nonsynonymous","L38P Y91L Q144S",3
"lib1","SARS-CoV-2","AAAATCCGGAACCGAG",1,13.66,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N58Y D97R P161C",3
"lib1","SARS-CoV-2","AAAATCCGGTGGCACT",8,71.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12S P96D F156Y",3
"lib1","SARS-CoV-2","AAAATCCGTCACATTA",1,83.39,10.66,-0.1,0.08,2.74,1.09,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","AAAATCCGTTGCAATT",3,11.64,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R27K N130V V180P",3
"lib1","SARS-CoV-2","AAAATCCGTTTTAATG",4,12.01,10.54,-0.22,0.12,2.41,1,0.01,"1 nonsynonymous","R25S",1
"lib1","SARS-CoV-2","AAAATCCTAAGTCTGA",2,175.97,8.35,-2.41,0.13,2.74,1.07,0.01,">1 nonsynonymous","Y175A T201D",2
"lib1","SARS-CoV-2","AAAATCCTAATACTAT",1,20.09,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","F62R D90H G146L N151L V173W",5
"lib1","SARS-CoV-2","AAAATCCTATAGAAAA",4,9.32,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N1Y T100Y P133H C158D",4
"lib1","SARS-CoV-2","AAAATCCTCTGTCAGA",1,42.67,10.44,-0.33,0.33,1.94,1.01,0.05,">1 nonsynonymous","E10Q K56L",2
"lib1","SARS-CoV-2","AAAATCCTTTACGCAG",2,98.59,10.75,-0.01,0.07,2.93,1.05,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","AAAATCGAAATCACAT",1,14.29,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S69L R136V",2
"lib1","SARS-CoV-2","AAAATCGAACCCTGTT",6,0.27,NA,NA,NA,NA,NA,NA,"stop","D98F F167*",2
"lib1","SARS-CoV-2","AAAATCGAATCCTATG",7,115.4,10.71,-0.06,0.05,2.9,1.06,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","AAAATCGACGGAGCCT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","S19R S36T Y91G Y143* Q168P Y175T",6
"lib1","SARS-CoV-2","AAAATCGAGAGGCAGG",5,28.16,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","S19L Y91V D97K S129L Y143H",5
"lib1","SARS-CoV-2","AAAATCGAGCTGCGCA",2,20.63,8.58,-2.18,0.12,2.67,1.06,0.01,">1 nonsynonymous","S69R T170N",2
"lib1","SARS-CoV-2","AAAATCGATAGACATT",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L G86F P96Q",3
"lib1","SARS-CoV-2","AAAATCGATAGACGGG",7,3.16,NA,NA,NA,NA,NA,NA,"stop","S19* V37R Y93N G117W Y175*",5
"lib1","SARS-CoV-2","AAAATCGATAGGGAAA",2,41.03,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G86E W106R T170F Y178G",4
"lib1","SARS-CoV-2","AAAATCGCTCAAAAGC",2,12.7,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","D90V I104S G152I Q168T",4
"lib1","SARS-CoV-2","AAAATCGCTTTACCCG",5,194.07,9.91,-0.85,0.07,2.44,1.04,0,"1 nonsynonymous","L38A",1
"lib1","SARS-CoV-2","AAAATCGTATTAATTT",1,14.6,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y35S L60S S129T Y159P Q168R",5
"lib1","SARS-CoV-2","AAAATCGTGAAACTCC",1,5.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G Y93S V103Q Y159H S184N L188G",6
"lib1","SARS-CoV-2","AAAATCGTGCAAATTC",1,19.43,10.07,-0.69,0.08,2.73,1,0,">1 nonsynonymous","A14L K56L D98N L122T S129R",5
"lib1","SARS-CoV-2","AAAATCGTTCATGATA",3,10.13,8.16,-2.6,0.23,2.43,1.24,0.03,">1 nonsynonymous","L122K C158V",2
"lib1","SARS-CoV-2","AAAATCTAAAAAGCGG",1,34.35,10.85,0.09,0.09,2.88,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATCTAAAATAATT",4,51.82,10.76,-0.01,0.09,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATCTAAACATAAT",1,4.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","AAAATCTACTCACCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43* K56* T201A",3
"lib1","SARS-CoV-2","AAAATCTACTTGAATG",3,110.7,9.2,-1.56,0.07,2.8,1.13,0,">1 nonsynonymous","G83Y Y119G P149L",3
"lib1","SARS-CoV-2","AAAATCTAGCACGAGC",12,199.01,9.7,-1.07,0.03,2.87,1.05,0,">1 nonsynonymous","C61R L125V T201W",3
"lib1","SARS-CoV-2","AAAATCTAGGGTTAGC",3,0.25,NA,NA,NA,NA,NA,NA,"stop","V32* N40P C49Y C61Y V77A G83T",6
"lib1","SARS-CoV-2","AAAATCTATAGAGAAG",5,52.82,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C49L K87S G117R L122S G152H",5
"lib1","SARS-CoV-2","AAAATCTATGGGTGCA",1,137.44,10.15,-0.61,0.03,2.96,1,0,">1 nonsynonymous","G83R Y175H T201N",3
"lib1","SARS-CoV-2","AAAATCTATTCGATTA",7,68.79,8.24,-2.53,0.29,1.72,1.1,0.03,">1 nonsynonymous","R16W P54Y S108D",3
"lib1","SARS-CoV-2","AAAATCTCAGTACTAA",6,33.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","AAAATCTGCACGCGAT",4,3.59,NA,NA,NA,NA,NA,NA,"stop","G9Y S29* K56S W106I Y119S K128* G146V P149K T170S",9
"lib1","SARS-CoV-2","AAAATCTGCCTACGTT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L T15Q Y143N",3
"lib1","SARS-CoV-2","AAAATCTGGGAATAAA",10,263.72,10.5,-0.27,0.03,2.93,1.03,0,">1 nonsynonymous","N130H T170S",2
"lib1","SARS-CoV-2","AAAATCTGTAGACACA",3,2.03,NA,NA,NA,NA,NA,NA,"stop","R78W S139G G152* Y165A",4
"lib1","SARS-CoV-2","AAAATCTTGCGTTTAG",1,7.25,8.38,-2.38,0.23,1.9,1.07,0.04,">1 nonsynonymous","K94A T100H S113T",3
"lib1","SARS-CoV-2","AAAATGAAAATAGAAA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","D59I R136W F160*",3
"lib1","SARS-CoV-2","AAAATGAAACGCTTTC",4,53.45,10.8,0.03,0.1,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATGAAATGTGACA",2,127.01,9.32,-1.45,0.08,2.79,1.08,0,">1 nonsynonymous","I2Y A105T T170Y",3
"lib1","SARS-CoV-2","AAAATGAACACCCTGC",3,23.91,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6N L95F",2
"lib1","SARS-CoV-2","AAAATGAACACTTTAA",1,15.06,10.41,-0.35,0.18,2.58,1,0.01,">1 nonsynonymous","T3F T201G",2
"lib1","SARS-CoV-2","AAAATGAACCAGAGAA",2,14.43,10.24,-0.53,0.21,2.41,1,0.02,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","AAAATGAACCCCATGT",2,34.66,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","S41L G86P W106V L122R C150F P197S",6
"lib1","SARS-CoV-2","AAAATGAACTATATCC",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85G F99A T201I",3
"lib1","SARS-CoV-2","AAAATGAACTGTTTTG",3,53.3,10.84,0.07,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATGAAGGTCTTGA",3,19.13,10.78,0.02,0.07,2.92,1.05,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","AAAATGAATACCAAAA",3,5.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y V103R E141I",3
"lib1","SARS-CoV-2","AAAATGAATCATCGAC",2,51.28,10.74,-0.03,0.04,2.91,1.04,0,">1 nonsynonymous","Y35M G116P",2
"lib1","SARS-CoV-2","AAAATGAATGATGTCT",2,65.29,10.83,0.07,0.05,2.92,1.01,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","AAAATGACAGCTCGAG",4,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S F167R",2
"lib1","SARS-CoV-2","AAAATGACATACAAAC",2,34.53,9.92,-0.84,0.11,2.22,1.11,0,">1 nonsynonymous","N58S W106Q",2
"lib1","SARS-CoV-2","AAAATGACATTTAAAA",2,32.3,8.4,-2.37,0.16,2.64,1.16,0.01,">1 nonsynonymous","V37M Y143N",2
"lib1","SARS-CoV-2","AAAATGACCTCGTATC",2,0.53,NA,NA,NA,NA,NA,NA,"stop","F62S S139* T170M",3
"lib1","SARS-CoV-2","AAAATGACCTGTCCAG",1,7.34,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","T55S F167K",2
"lib1","SARS-CoV-2","AAAATGACTGAATCAA",4,27.88,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2V G9S V32L D34P Y119V R127P",6
"lib1","SARS-CoV-2","AAAATGACTGTCCTGC",7,36.23,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S41T T55Y R73L F99L",4
"lib1","SARS-CoV-2","AAAATGACTGTGCAAA",1,27.96,10.78,0.02,0.09,2.88,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATGAGAGTCAACA",1,27.73,10.66,-0.1,0.04,2.97,1,0,">1 nonsynonymous","A67V Q168F",2
"lib1","SARS-CoV-2","AAAATGAGATATAACC",2,14.56,9.85,-0.92,0.1,2.83,1.05,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","AAAATGAGGACCCAAA",1,81.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y21E L95H",2
"lib1","SARS-CoV-2","AAAATGATAAAATTTC",2,1.29,NA,NA,NA,NA,NA,NA,"stop","N13E Y21Q V32E K48M Y50* V71Q W106P D112F Y123R",9
"lib1","SARS-CoV-2","AAAATGATACTGATGG",3,75.74,9.55,-1.22,0.14,2.24,1.1,0.01,">1 nonsynonymous","K48R Y91H D98F K198M",4
"lib1","SARS-CoV-2","AAAATGATATAATAAT",6,17.1,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F99T L162E",2
"lib1","SARS-CoV-2","AAAATGATGAAATCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* K87* L122A",3
"lib1","SARS-CoV-2","AAAATGATGCAAAACA",9,0.97,NA,NA,NA,NA,NA,NA,"stop","E10D P96Y P197*",3
"lib1","SARS-CoV-2","AAAATGATGCCCCGCA",6,37.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K26L S43L A89W N120M E141L Q168R E186T",7
"lib1","SARS-CoV-2","AAAATGATTAAAAGAA",2,18.84,NA,NA,NA,NA,NA,NA,"stop","S43* C61S I72T I142* Q163P",5
"lib1","SARS-CoV-2","AAAATGCAACCACTAG",1,50.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N T201E",2
"lib1","SARS-CoV-2","AAAATGCAAGTAAAGC",3,9.54,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","R16M S29G S53Y I104M R179S",5
"lib1","SARS-CoV-2","AAAATGCAAGTAAGAT",8,214.19,9.71,-1.05,0.12,1.81,1.07,0.01,">1 nonsynonymous","R127N T140V",2
"lib1","SARS-CoV-2","AAAATGCAGTGATAAT",2,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N R16S L95T K132N T170N",5
"lib1","SARS-CoV-2","AAAATGCATCATTATG",9,69.82,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14M Y143S T170I",3
"lib1","SARS-CoV-2","AAAATGCATTAAATAT",3,14.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q79L R127V",2
"lib1","SARS-CoV-2","AAAATGCATTTTCCGA",4,20.47,10.64,-0.12,0.06,2.95,1.02,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","AAAATGCCAAGGAGAT",9,79.17,10.85,0.09,0.08,2.84,1.09,0,">1 nonsynonymous","A105S Y123K T201R",3
"lib1","SARS-CoV-2","AAAATGCCAATCAACC",3,22.41,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y121P D137K P149H",3
"lib1","SARS-CoV-2","AAAATGCCATTTATAA",3,1.36,NA,NA,NA,NA,NA,NA,"stop","V11S Y93*",2
"lib1","SARS-CoV-2","AAAATGCCCAATATTT",18,207.71,10.4,-0.36,0.02,2.86,1.04,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","AAAATGCCCGTTAGAT",2,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M S53P V77G",3
"lib1","SARS-CoV-2","AAAATGCCGATCCTTT",5,10.36,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","S45T K94V R127P T170L E186S",5
"lib1","SARS-CoV-2","AAAATGCCTTCGCGAT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib1","SARS-CoV-2","AAAATGCGCCAGTCAA",8,4.01,NA,NA,NA,NA,NA,NA,"stop","A22R A105K R127S R136P I142*",5
"lib1","SARS-CoV-2","AAAATGCGCTACATTA",5,42.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C K114L P149S",3
"lib1","SARS-CoV-2","AAAATGCGTCTGGGGC",3,50.02,7.29,-3.47,0.25,1.66,1.13,0.02,"1 nonsynonymous","C150E",1
"lib1","SARS-CoV-2","AAAATGCGTGCCGATA",3,9.09,7.98,-2.79,0.21,1.9,1.05,0.01,">1 nonsynonymous","D34N N107D E141T",3
"lib1","SARS-CoV-2","AAAATGCGTGTCCACA",6,44.82,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F62N K87N C150L E154V",4
"lib1","SARS-CoV-2","AAAATGCTAGACACGC",5,58.45,10.09,-0.67,0.12,2.45,1.01,0.01,">1 nonsynonymous","D34F E141T",2
"lib1","SARS-CoV-2","AAAATGCTAGATTTTT",3,23.54,10.85,0.08,0.06,2.93,1,0,"1 nonsynonymous","V173M",1
"lib1","SARS-CoV-2","AAAATGCTATCTAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44N D98R",2
"lib1","SARS-CoV-2","AAAATGCTCAGGAAAG",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25G K132E E154V",3
"lib1","SARS-CoV-2","AAAATGCTCTTAAAAC",13,4.48,NA,NA,NA,NA,NA,NA,"stop","C31*",1
"lib1","SARS-CoV-2","AAAATGCTTATTCTGA",10,76.43,8.37,-2.4,0.24,1.5,1.07,0.02,">1 nonsynonymous","L60K R127L",2
"lib1","SARS-CoV-2","AAAATGGAATACAACA",6,46.46,9.64,-1.13,0.19,1.72,1.13,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","AAAATGGAGAACAAGA",5,36.81,10.63,-0.13,0.04,3,1,0,">1 nonsynonymous","D59C S200G",2
"lib1","SARS-CoV-2","AAAATGGATCCTGATT",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M C49I P149N",3
"lib1","SARS-CoV-2","AAAATGGCAAGAAGCC",6,100.67,10.01,-0.75,0.05,2.88,1.02,0,">1 nonsynonymous","Y143L T148I K198N",3
"lib1","SARS-CoV-2","AAAATGGCCCTATAAT",2,26.4,10.66,-0.11,0.06,2.86,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATGGCGGGGCAAT",4,22.55,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","G51S N107K L162S",3
"lib1","SARS-CoV-2","AAAATGGCGTAAGCCT",2,35.1,10.62,-0.15,0.09,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATGGGCGGTTCTT",1,34.75,10.14,-0.62,0.12,2.16,1,0.01,">1 nonsynonymous","G51I K56S",2
"lib1","SARS-CoV-2","AAAATGGGGATAAGGA",3,19.52,9.49,-1.28,0.27,1.5,1.04,0.04,">1 nonsynonymous","C6N F17M G116A",3
"lib1","SARS-CoV-2","AAAATGGGTGATATAT",2,66.74,10.04,-0.72,0.09,2.36,1.02,0,">1 nonsynonymous","A105H V153K",2
"lib1","SARS-CoV-2","AAAATGGGTTGTTGCG",1,27.85,10.73,-0.03,0.04,2.97,1,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","AAAATGGTGGGTTTAT",10,2.79,NA,NA,NA,NA,NA,NA,"stop","D90* L122D F156L",3
"lib1","SARS-CoV-2","AAAATGGTTTTAATGA",1,3.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","AAAATGTAAAATAGCA",5,24.77,8.94,-1.82,0.15,2.18,1.12,0.01,">1 nonsynonymous","S45H D59L N120L F156S",4
"lib1","SARS-CoV-2","AAAATGTAAATCAAGG",2,5.92,6,-4.76,2,1.5,1.08,0.07,">1 nonsynonymous","P96L D137F G174T",3
"lib1","SARS-CoV-2","AAAATGTAATGTTCTT",2,63.42,10.72,-0.05,0.06,2.91,1.05,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","AAAATGTACAGGTTCC",1,15.4,9.94,-0.82,0.13,2.14,1,0.01,">1 nonsynonymous","A18E S139C G152F P197L",4
"lib1","SARS-CoV-2","AAAATGTACCATAGTT",1,18.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T C31Y N118L",3
"lib1","SARS-CoV-2","AAAATGTACCGTGGAC",2,15.17,8.57,-2.19,0.12,1.5,1.01,0.01,">1 nonsynonymous","T15V F47C W106N",3
"lib1","SARS-CoV-2","AAAATGTACTGCTACG",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R T100G T201S",3
"lib1","SARS-CoV-2","AAAATGTAGAAGTTTT",2,49.26,10.52,-0.24,0.07,2.86,1.02,0,">1 nonsynonymous","N1Y K56L S200E",3
"lib1","SARS-CoV-2","AAAATGTAGCCCCAAC",13,133.37,10.57,-0.19,0.03,2.9,1.04,0,">1 nonsynonymous","T55A A81S",2
"lib1","SARS-CoV-2","AAAATGTAGGAAAAAA",2,51.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","W23L Y35E S113W",3
"lib1","SARS-CoV-2","AAAATGTAGTACAGAT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K Y91K D97L D137H C150H",5
"lib1","SARS-CoV-2","AAAATGTATATTCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","K56F F99*",2
"lib1","SARS-CoV-2","AAAATGTCAAATTATG",2,31.4,10.66,-0.1,0.06,2.9,1.01,0,">1 nonsynonymous","E10S T63Q",2
"lib1","SARS-CoV-2","AAAATGTCCAATGGTG",1,17.38,10.5,-0.26,0.05,2.92,1,0,">1 nonsynonymous","S41H F62L Q144T",3
"lib1","SARS-CoV-2","AAAATGTCCTCGGTAG",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A42R Y50N G116R S147L",5
"lib1","SARS-CoV-2","AAAATGTGAATCCAAC",3,665.42,6.25,-4.52,0.63,1.5,1.25,0.02,"1 nonsynonymous","L131P",1
"lib1","SARS-CoV-2","AAAATGTGGCAAGCGG",7,51.4,6.86,-3.91,0.31,1.5,1.08,0.02,">1 nonsynonymous","L38C D97P R136S",3
"lib1","SARS-CoV-2","AAAATGTGGCGTGCGG",8,1.67,NA,NA,NA,NA,NA,NA,"stop","N4F K128C A145* N151I N157G V180W",6
"lib1","SARS-CoV-2","AAAATGTGGCTGAGCA",6,15.03,6,-4.76,0.65,1.5,1.1,0.01,">1 nonsynonymous","S19T A89Y",2
"lib1","SARS-CoV-2","AAAATGTGGTTGACCT",5,34.15,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","AAAATGTGTAGACTGA",3,7.61,6.95,-3.81,0.7,1.5,1.03,0.06,">1 nonsynonymous","D112N N120F K128F",3
"lib1","SARS-CoV-2","AAAATGTTAAAGTAGA",8,33.13,10.31,-0.45,0.1,2.85,1,0,">1 nonsynonymous","N64P L122D",2
"lib1","SARS-CoV-2","AAAATGTTAACGAAAG",2,14.46,6.09,-4.67,1.35,1.5,1.28,0.05,">1 nonsynonymous","T85L G101D N107Y K132Y",4
"lib1","SARS-CoV-2","AAAATGTTAGAAAAAT",2,12.75,10.06,-0.7,0.07,2.55,1.06,0,">1 nonsynonymous","T3L G146W",2
"lib1","SARS-CoV-2","AAAATGTTAGATATTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","G86K Y119N Q163* G172Q",4
"lib1","SARS-CoV-2","AAAATGTTAGTATCCC",17,164.83,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I2W S29R T63N G116K Q144S C158Y V173Q",7
"lib1","SARS-CoV-2","AAAATGTTCCCCCCGG",7,2.53,NA,NA,NA,NA,NA,NA,"stop","G86S S113V K128* Q168R",4
"lib1","SARS-CoV-2","AAAATGTTGATGAACT",7,38.06,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","L5S N40G P96L E141L",4
"lib1","SARS-CoV-2","AAAATGTTTCAAGTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L G117S T140D G172C",4
"lib1","SARS-CoV-2","AAAATGTTTTAACATA",2,34.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50V Y121S G174Q K199W",4
"lib1","SARS-CoV-2","AAAATTAAAAATTAGA",2,13.14,10.06,-0.71,0.1,2.76,1,0,">1 nonsynonymous","Y91F D97F Y121H E141A",4
"lib1","SARS-CoV-2","AAAATTAAAAGAAAAC",3,54.18,8.37,-2.4,0.15,2.08,1.19,0.01,">1 nonsynonymous","T55Y G74N G174C",3
"lib1","SARS-CoV-2","AAAATTAAACATTACA",9,36.09,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","T85E C102S",2
"lib1","SARS-CoV-2","AAAATTAAACCACAAC",2,12.58,8.27,-2.49,0.45,1.5,1.04,0.08,">1 nonsynonymous","D90S D97G L131V V181S",4
"lib1","SARS-CoV-2","AAAATTAAAGAGCCGT",3,303.93,10.1,-0.66,0.07,2.34,1.01,0,">1 nonsynonymous","T15Y L57M",2
"lib1","SARS-CoV-2","AAAATTAAAGCACACC",1,19.96,9.52,-1.24,0.17,1.94,1.07,0.01,">1 nonsynonymous","R25K L122W",2
"lib1","SARS-CoV-2","AAAATTAACAGCGTAC",9,51.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y91C P96L",2
"lib1","SARS-CoV-2","AAAATTAACATCTTTT",2,7.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A18R D68A N92D F160N",4
"lib1","SARS-CoV-2","AAAATTAACATTTGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N P133E C150E T201V",4
"lib1","SARS-CoV-2","AAAATTAACTGCTTTG",1,21.94,9.85,-0.92,0.15,1.95,1.02,0.01,">1 nonsynonymous","F12M D90Y P149S",3
"lib1","SARS-CoV-2","AAAATTAAGACTTTTC",2,16.3,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6L A42D V77P P149R",4
"lib1","SARS-CoV-2","AAAATTAAGCGTAGCG",3,50.35,8.47,-2.29,0.21,1.8,1.14,0.02,">1 nonsynonymous","G51F N118D K132Q",3
"lib1","SARS-CoV-2","AAAATTAAGTTAGCCT",3,31.64,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R16S G74E L95G Y119V T201A",5
"lib1","SARS-CoV-2","AAAATTAATATCACTT",2,29.17,6,-4.76,2,2.21,1.27,0.02,">1 nonsynonymous","P7Q S69G N107V",3
"lib1","SARS-CoV-2","AAAATTAATCTTAAAT",5,7.79,NA,NA,NA,NA,NA,NA,"stop","V37* Y121M",2
"lib1","SARS-CoV-2","AAAATTAATGTCAACA",6,107.9,10.56,-0.2,0.04,2.87,1.07,0,"1 nonsynonymous","A81E",1
"lib1","SARS-CoV-2","AAAATTACACCTTACA",3,123.02,9.42,-1.35,0.07,2.82,1.1,0,">1 nonsynonymous","V32M K48L T170G",3
"lib1","SARS-CoV-2","AAAATTACCACTATAC",6,58.94,10.65,-0.12,0.06,2.9,1.08,0,"1 nonsynonymous","K199R",1
"lib1","SARS-CoV-2","AAAATTACCGCACAAG",6,74.79,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D90I L125T G146M Q176L",4
"lib1","SARS-CoV-2","AAAATTACCTTCACTA",5,88.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F62C I72V S113E N157Y V194A",5
"lib1","SARS-CoV-2","AAAATTACGCTGCTTA",11,125.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G86P K94A T170A Y175L T201S",5
"lib1","SARS-CoV-2","AAAATTACGCTTCACC",2,6.16,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","A22V F99N F126S",3
"lib1","SARS-CoV-2","AAAATTACTAAACCTA",3,9.29,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","Y39H V77M P82Y V103D",4
"lib1","SARS-CoV-2","AAAATTACTAGTGGCG",2,49.44,9.4,-1.36,0.13,2.75,1.09,0.01,">1 nonsynonymous","I2T K114V Y119L K128S",4
"lib1","SARS-CoV-2","AAAATTACTCCACATT",4,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W G101W P133L",3
"lib1","SARS-CoV-2","AAAATTAGATAAATAA",3,16.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19M I142Y Y165I",3
"lib1","SARS-CoV-2","AAAATTATAAACAGTC",4,47.64,10.13,-0.63,0.05,2.97,1,0,">1 nonsynonymous","N64K Q168R G174D",3
"lib1","SARS-CoV-2","AAAATTATAGGCATGA",2,7.42,NA,NA,NA,NA,NA,NA,"stop","F17A S41* S113T",3
"lib1","SARS-CoV-2","AAAATTATCATTGGCG",3,65.19,9.83,-0.94,0.1,2.64,1,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","AAAATTATCCTCAACC",3,25.21,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y21I C31M N157H",3
"lib1","SARS-CoV-2","AAAATTATCCTTAACC",11,77.89,10.19,-0.57,0.05,2.77,1.07,0,">1 nonsynonymous","A33R S184N",2
"lib1","SARS-CoV-2","AAAATTATCGTTATCT",3,1.24,NA,NA,NA,NA,NA,NA,"stop","N4L W23* P82S K114Q",4
"lib1","SARS-CoV-2","AAAATTATGAGTAACA",5,18.44,10.59,-0.17,0.08,2.93,1,0,">1 nonsynonymous","Y66T K114F",2
"lib1","SARS-CoV-2","AAAATTATGCATTGAC",4,71.24,8.5,-2.26,0.23,1.5,1.03,0.02,">1 nonsynonymous","R27A T100L P133F Q176R",4
"lib1","SARS-CoV-2","AAAATTATGTGATTTT",2,32.32,10.63,-0.14,0.04,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAATTCAAGTGAATA",5,38.32,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N4G Y35N R136P Q144G",4
"lib1","SARS-CoV-2","AAAATTCACCAAACGA",1,46.58,10.86,0.09,0.07,2.91,1.04,0,"1 nonsynonymous","K198M",1
"lib1","SARS-CoV-2","AAAATTCACCTAGGAA",3,24.32,10.82,0.06,0.29,2.42,1.05,0.03,"wildtype","",0
"lib1","SARS-CoV-2","AAAATTCACTCTAAGG",7,49.87,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P54Q F99S K132D",3
"lib1","SARS-CoV-2","AAAATTCACTTTAAAA",4,19.1,10.28,-0.48,0.08,2.9,1.07,0,">1 nonsynonymous","F44Y T85F",2
"lib1","SARS-CoV-2","AAAATTCACTTTTTTC",3,27.79,7.02,-3.74,0.35,1.5,1.2,0.03,">1 nonsynonymous","Y91S S139C",2
"lib1","SARS-CoV-2","AAAATTCAGAAATCTT",5,117.34,10.04,-0.72,0.06,2.92,1.01,0,"1 nonsynonymous","A145R",1
"lib1","SARS-CoV-2","AAAATTCAGTATATAA",1,13.29,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","C6P N13C R136V",3
"lib1","SARS-CoV-2","AAAATTCAGTGTCGAA",2,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K A42N V71G D98L G116M F156E G166R",7
"lib1","SARS-CoV-2","AAAATTCAGTTATGGA",7,163.73,6.07,-4.69,0.79,1.5,1.23,0.01,">1 nonsynonymous","T100M C158D",2
"lib1","SARS-CoV-2","AAAATTCATGGTCATT",3,98.76,6,-4.76,1.67,1.5,1.16,0.01,">1 nonsynonymous","G83V Q176V",2
"lib1","SARS-CoV-2","AAAATTCCAGGACAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","E76G T100S F156*",3
"lib1","SARS-CoV-2","AAAATTCCCACGCGAA",7,36.69,6.67,-4.09,0.36,1.5,1.18,0.02,">1 nonsynonymous","K56W G86D",2
"lib1","SARS-CoV-2","AAAATTCCTGGTGCAT",2,63.11,10.72,-0.05,0.04,2.94,1.01,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","AAAATTCGAATACATA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","C6R A42K T148*",3
"lib1","SARS-CoV-2","AAAATTCGAGATAGTG",2,50.21,10.75,-0.02,0.07,2.85,1.08,0,"1 nonsynonymous","N120D",1
"lib1","SARS-CoV-2","AAAATTCGATTCAATA",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S E10D A42P V65S T148R L162M",6
"lib1","SARS-CoV-2","AAAATTCGCTATAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib1","SARS-CoV-2","AAAATTCGTAAATGAT",2,18.27,8.76,-2,0.16,2.08,1.2,0.02,">1 nonsynonymous","I2E C31T L60S G116Y S139T",5
"lib1","SARS-CoV-2","AAAATTCGTATCCCGT",4,10.39,6,-4.76,2,3,1.11,0,">1 nonsynonymous","E10W A33Q S43I G117E I138Q",5
"lib1","SARS-CoV-2","AAAATTCTACAGCTTT",3,119.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35E S43G S69K F167A",4
"lib1","SARS-CoV-2","AAAATTCTCAATTCCT",2,24.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14N D68G D90L",3
"lib1","SARS-CoV-2","AAAATTCTCTTCAAAG",3,58.54,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N64F A105L K132R F167R G174L",5
"lib1","SARS-CoV-2","AAAATTCTGGTAACTA",2,20.54,10.02,-0.75,0.13,2.71,1.01,0.01,">1 nonsynonymous","A33T T85F T100K",3
"lib1","SARS-CoV-2","AAAATTCTGTTGATCC",8,119.13,10.39,-0.37,0.06,2.91,1.01,0,"1 nonsynonymous","V65T",1
"lib1","SARS-CoV-2","AAAATTCTTGCCCCAT",3,13.2,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N64V Y93H T100I V103C",4
"lib1","SARS-CoV-2","AAAATTGAAACATATA",2,41.96,9.84,-0.92,0.08,2.13,1.05,0,">1 nonsynonymous","V103L P197T",2
"lib1","SARS-CoV-2","AAAATTGAACCAAAAA",7,60.74,10.59,-0.17,0.06,2.91,1.05,0,">1 nonsynonymous","T55S L60I N130K S164G",4
"lib1","SARS-CoV-2","AAAATTGAATCATCAG",4,57.76,10.76,0,0.08,2.92,1.07,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","AAAATTGACAAAAGAA",1,1.06,NA,NA,NA,NA,NA,NA,"stop","N4P Q176*",2
"lib1","SARS-CoV-2","AAAATTGACATACATT",4,19.85,8.62,-2.15,0.39,1.5,1,0.06,">1 nonsynonymous","V103S G152C V173F",3
"lib1","SARS-CoV-2","AAAATTGAGCAATTCT",7,84.66,10.76,0,0.05,2.87,1.07,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","AAAATTGAGTATCGGA",5,146.71,10.08,-0.68,0.05,2.88,1.01,0,">1 nonsynonymous","N120I S164E",2
"lib1","SARS-CoV-2","AAAATTGATAAAAATT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","R25L P82*",2
"lib1","SARS-CoV-2","AAAATTGATATAAAGA",3,25.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44M C61S N120L K128F I142S C158T",6
"lib1","SARS-CoV-2","AAAATTGATATTAAAC",15,75.08,6.16,-4.6,1.1,1.5,1.23,0.04,">1 nonsynonymous","S19L C61F R136F G152P",4
"lib1","SARS-CoV-2","AAAATTGATTAGGGAA",1,29.69,10.69,-0.08,0.08,2.78,1,0,">1 nonsynonymous","G9K T15L",2
"lib1","SARS-CoV-2","AAAATTGCAATAACCA",6,71.52,10.69,-0.08,0.04,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATTGCAATATTGA",20,257.14,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K56L S69V N107G Y178V",4
"lib1","SARS-CoV-2","AAAATTGCACCTTGGT",12,4.08,NA,NA,NA,NA,NA,NA,"stop","T3Q V32I Y50* Y91N D97V G172L",6
"lib1","SARS-CoV-2","AAAATTGCATAATTAT",2,7.81,9.18,-1.58,0.24,2.75,1.16,0.02,">1 nonsynonymous","T3S T55F Y119R G174E",4
"lib1","SARS-CoV-2","AAAATTGCATCCCCGC",9,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V P82L T100E",3
"lib1","SARS-CoV-2","AAAATTGCCAAACCGG",7,155.83,10.25,-0.51,0.03,2.93,1,0,"1 nonsynonymous","E154H",1
"lib1","SARS-CoV-2","AAAATTGCCCAATCGA",3,37.2,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C49S D68L",2
"lib1","SARS-CoV-2","AAAATTGCTAAACACT",4,72.06,8.1,-2.67,0.09,2.53,1.11,0,">1 nonsynonymous","L60Y Y119V F126K",3
"lib1","SARS-CoV-2","AAAATTGGATGATCCA",11,220.06,10.71,-0.05,0.05,2.92,1.05,0,">1 nonsynonymous","L122S V173G",2
"lib1","SARS-CoV-2","AAAATTGGCGGCTGAT",2,86.71,7.73,-3.03,0.17,1.68,1.1,0.01,">1 nonsynonymous","Q84G N157I",2
"lib1","SARS-CoV-2","AAAATTGGGCGATACA",1,12.81,6.74,-4.03,0.35,3,1.12,0.02,">1 nonsynonymous","T3L E10S A89L A105F I138F V181G",6
"lib1","SARS-CoV-2","AAAATTGGTCGAAGGC",3,108.41,8.59,-2.18,0.14,2.2,1.11,0.01,">1 nonsynonymous","N13Y Y143I",2
"lib1","SARS-CoV-2","AAAATTGGTTTAAGTC",1,27.22,10.77,0,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAATTGTAAAACCAA",10,81.21,9.25,-1.51,0.08,2.82,1.14,0,">1 nonsynonymous","L125Y P149S",2
"lib1","SARS-CoV-2","AAAATTGTAATCAGGA",3,35.14,10.71,-0.05,0.06,2.94,1.03,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","AAAATTGTAGTATCCT",2,12.07,10.5,-0.27,0.2,2.14,1,0.01,">1 nonsynonymous","A81N T140M",2
"lib1","SARS-CoV-2","AAAATTGTATAGACCT",4,2.09,NA,NA,NA,NA,NA,NA,"stop","S19R V37P T85* P96V G155N",5
"lib1","SARS-CoV-2","AAAATTGTCCTCTGGA",2,13.56,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","S19K N92E F156L",3
"lib1","SARS-CoV-2","AAAATTGTGCCACGTC",4,43.22,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","P54D I88Q",2
"lib1","SARS-CoV-2","AAAATTTAACAAAAAA",13,80.6,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5K P54C C150K",3
"lib1","SARS-CoV-2","AAAATTTAACAACCTT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F D137M S164C",3
"lib1","SARS-CoV-2","AAAATTTACACCTATG",8,17.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V71Q Y143L Y165L",3
"lib1","SARS-CoV-2","AAAATTTACCGTTTCG",1,79.89,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40I Y50A L60S G86L K128V",5
"lib1","SARS-CoV-2","AAAATTTATCTTAACA",2,38.26,9.28,-1.48,0.1,2.46,1.08,0.01,">1 nonsynonymous","C6G G9I T140W",3
"lib1","SARS-CoV-2","AAAATTTATGCATACA",2,70.61,9.98,-0.78,0.09,2.19,1.06,0,">1 nonsynonymous","N13Y S36L Q144S",3
"lib1","SARS-CoV-2","AAAATTTATTACAGAC",3,17.84,9.93,-0.83,0.13,2.08,1.14,0.01,">1 nonsynonymous","Y39T K48G",2
"lib1","SARS-CoV-2","AAAATTTCAAATACTA",4,201.05,9.01,-1.76,0.05,2.81,1.1,0,">1 nonsynonymous","S43N T85P L125C",3
"lib1","SARS-CoV-2","AAAATTTCCTAATTAT",1,27.37,10.15,-0.61,0.12,2.69,1.03,0.01,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","AAAATTTCTAGCATTG",3,66.83,10.83,0.07,0.05,2.92,1.03,0,">1 nonsynonymous","T100V Q163S",2
"lib1","SARS-CoV-2","AAAATTTCTATAACAT",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F P54Y D90N G146L F167I",5
"lib1","SARS-CoV-2","AAAATTTGATCATACT",4,108.75,10.76,0,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAATTTGTCACTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G116K T170L S200*",3
"lib1","SARS-CoV-2","AAAATTTTAGAATACA",2,60.13,9.71,-1.06,0.15,2.53,1.12,0.01,">1 nonsynonymous","A18F K87I K132W V153G",4
"lib1","SARS-CoV-2","AAAATTTTAGAGATAT",2,33.89,10.23,-0.53,0.08,2.7,1.08,0,"1 nonsynonymous","G51D",1
"lib1","SARS-CoV-2","AAAATTTTATAAAAAG",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F44H S69L",3
"lib1","SARS-CoV-2","AAAATTTTGAGAATCA",3,31.21,10.37,-0.4,0.05,2.95,1,0,"1 nonsynonymous","T170Q",1
"lib1","SARS-CoV-2","AAAATTTTGATTTAGT",1,36.74,10.3,-0.46,0.03,2.94,1,0,"1 nonsynonymous","D34K",1
"lib1","SARS-CoV-2","AAAATTTTGGAACCGA",5,2.22,NA,NA,NA,NA,NA,NA,"stop","P82* P96S N130G Q144Y L187Y",5
"lib1","SARS-CoV-2","AAAATTTTTAAAAAAA",3,24.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R25P C49V A67Y D98S V103T",5
"lib1","SARS-CoV-2","AAACAAAAAAAAAAAA",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S S113D E154V F160Y T201R",5
"lib1","SARS-CoV-2","AAACAAAAAACAGTCT",2,6.58,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","K48N R124H",2
"lib1","SARS-CoV-2","AAACAAAAAACATATT",4,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E Y143K V182G",3
"lib1","SARS-CoV-2","AAACAAAAAAGCTACT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A K56S W106M Y119S V181A A190S T201E",7
"lib1","SARS-CoV-2","AAACAAAAAGGTCGGG",12,126.48,9.49,-1.27,0.05,2.82,1.09,0,">1 nonsynonymous","K87D N151S",2
"lib1","SARS-CoV-2","AAACAAAAGACATACA",4,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H T15V L60N I104M C158D",5
"lib1","SARS-CoV-2","AAACAAAATAATGAAG",1,54.41,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","K94S A105R Q168R",3
"lib1","SARS-CoV-2","AAACAAAATCACTTAC",3,67.74,8.21,-2.55,0.3,1.5,1.19,0.03,">1 nonsynonymous","R16V D90R Q176C",3
"lib1","SARS-CoV-2","AAACAAAATCCCCAAG",3,60.46,10.49,-0.27,0.07,2.86,1.07,0,">1 nonsynonymous","T3W P54L I80L L188G P197T",5
"lib1","SARS-CoV-2","AAACAAAATCGAACGG",4,75.54,6,-4.76,1.19,1.5,1.21,0.02,">1 nonsynonymous","S29I Y143W N157T",3
"lib1","SARS-CoV-2","AAACAAAATGAGATAA",4,12.82,6,-4.76,2,1.5,1.31,0.05,"1 nonsynonymous","C102Q",1
"lib1","SARS-CoV-2","AAACAAAATGTAAAAG",1,14.79,6,-4.76,2,1.5,1.09,0.01,"1 nonsynonymous","Y93Q",1
"lib1","SARS-CoV-2","AAACAAAATTGGATTT",4,23.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D75K I88R",2
"lib1","SARS-CoV-2","AAACAAAATTGTAATT",3,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V11F F99Y E141Q",4
"lib1","SARS-CoV-2","AAACAAACAAACATTT",1,54.52,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V77M D98L G116S F126L L162S",5
"lib1","SARS-CoV-2","AAACAAACAACACGCA",5,110.62,10.74,-0.02,0.06,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACAAACAACGACTG",1,17.59,10.08,-0.69,0.08,2.67,1.05,0,">1 nonsynonymous","L5T T15M A33L P54V I142L S200L",6
"lib1","SARS-CoV-2","AAACAAACACAATGTC",3,489.92,8.55,-2.21,0.1,2.78,1.08,0,">1 nonsynonymous","S113M L188Q C195S",3
"lib1","SARS-CoV-2","AAACAAACAGCCCACA",3,15.04,8.89,-1.87,0.17,1.66,1.14,0.01,">1 nonsynonymous","F17Y S41G D98L",3
"lib1","SARS-CoV-2","AAACAAACCCTTGCAC",7,159.72,9.09,-1.68,0.18,1.5,1.16,0.01,">1 nonsynonymous","A14Y V71L",2
"lib1","SARS-CoV-2","AAACAAACGAATTCAA",4,50.37,10.6,-0.16,0.05,2.95,1.02,0,">1 nonsynonymous","S43G Q144S",2
"lib1","SARS-CoV-2","AAACAAACGCCGAAAC",2,18.77,9.67,-1.09,0.09,1.96,1.05,0,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","AAACAAACGGTGTCGA",4,108.03,10.76,-0.01,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACAAACTATACTAG",1,17.36,10.3,-0.47,0.09,2.47,1.06,0,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","AAACAAACTATCAGGT",2,45.27,9.05,-1.71,0.12,1.77,1.09,0.01,">1 nonsynonymous","D137V S200C",2
"lib1","SARS-CoV-2","AAACAAACTATTGGCA",7,187.7,10.79,0.02,0.06,2.89,1.07,0,">1 nonsynonymous","G9D L188H A192S",3
"lib1","SARS-CoV-2","AAACAAACTCTACAAA",9,32.89,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F70L P96R S200T",3
"lib1","SARS-CoV-2","AAACAAACTTAATGCG",1,0.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","AAACAAAGACAACGTT",5,73.54,7.64,-3.12,0.19,1.5,1.12,0.01,">1 nonsynonymous","Y121G H189V",2
"lib1","SARS-CoV-2","AAACAAAGATTGACAG",1,16.04,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G146L V181L",2
"lib1","SARS-CoV-2","AAACAAAGCCACCCGT",3,90.93,6,-4.76,1.35,1.5,1.24,0.01,">1 nonsynonymous","S36D L57R P96L W106F F126S",5
"lib1","SARS-CoV-2","AAACAAAGGACGAAAA",2,34.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17T N40P N120M V173S K198M",5
"lib1","SARS-CoV-2","AAACAAAGGGATACCA",4,10.65,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6W N120C C158E G174L",4
"lib1","SARS-CoV-2","AAACAAAGTTAATACA",1,31.56,10.64,-0.13,0.12,2.68,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACAAATAATTTGAC",5,25.24,9.74,-1.03,0.15,1.8,1.13,0.01,">1 nonsynonymous","W106Y S164W",2
"lib1","SARS-CoV-2","AAACAAATACAAGTGG",4,121.39,6.96,-3.81,0.14,1.54,1.12,0,"1 nonsynonymous","C150M",1
"lib1","SARS-CoV-2","AAACAAATACACTGGA",5,62.29,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","N120L G172I T201M",3
"lib1","SARS-CoV-2","AAACAAATACCAGACT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","G86P N120I T140*",3
"lib1","SARS-CoV-2","AAACAAATAGTAGTGT",2,48.18,10.8,0.04,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACAAATATAACCAT",7,95.89,10.74,-0.03,0.09,2.94,1.06,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","AAACAAATATCAAACA",2,70.12,8.59,-2.17,0.08,2.79,1.08,0,">1 nonsynonymous","T55S G152P N171E",3
"lib1","SARS-CoV-2","AAACAAATATCATGAG",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71Q V77L Y93I Y175S",4
"lib1","SARS-CoV-2","AAACAAATCACCCGAT",14,271.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y91D D112T G146P A190V",4
"lib1","SARS-CoV-2","AAACAAATCTCGCATT",4,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57V S113E L122F T201C",4
"lib1","SARS-CoV-2","AAACAAATGTCAAAGG",3,0.64,NA,NA,NA,NA,NA,NA,"stop","N1R G86F I104* R127E F156Q",5
"lib1","SARS-CoV-2","AAACAAATTAAACCAG",5,79.53,8.42,-2.35,0.21,1.5,1.08,0.02,"1 nonsynonymous","A105K",1
"lib1","SARS-CoV-2","AAACAAATTAGAATAA",1,1.14,NA,NA,NA,NA,NA,NA,"stop","F8T N58S S69V W106*",4
"lib1","SARS-CoV-2","AAACAACAAAGTTGGA",4,80.48,10.08,-0.69,0.05,2.81,1.01,0,">1 nonsynonymous","G9F G155C",2
"lib1","SARS-CoV-2","AAACAACAAATCACAA",2,13.41,6,-4.76,2,3,1.06,0,">1 nonsynonymous","P54L Y91S N107T L125S",4
"lib1","SARS-CoV-2","AAACAACAACGCGCTA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","G9* N107L G116L A145Y C150W",5
"lib1","SARS-CoV-2","AAACAACACCTAAAAC",7,94.59,10.77,0,0.07,2.87,1.08,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","AAACAACATCATTACA",2,84.62,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","E10S Y35L F70V P82K W106M K199N",6
"lib1","SARS-CoV-2","AAACAACATTTATACA",4,37.42,9.83,-0.93,0.13,2.04,1.03,0.01,">1 nonsynonymous","C6I A22T",2
"lib1","SARS-CoV-2","AAACAACCAAACATAG",3,24.96,9.87,-0.89,0.16,2.03,1.12,0.01,">1 nonsynonymous","S45F N130S E141V",3
"lib1","SARS-CoV-2","AAACAACCAAATGGAC",1,15.51,6,-4.76,2,1.5,1.23,0.01,"1 nonsynonymous","Y93E",1
"lib1","SARS-CoV-2","AAACAACCACGCATCT",18,261.61,10.05,-0.72,0.07,2.57,1.04,0,">1 nonsynonymous","L5C D34R",2
"lib1","SARS-CoV-2","AAACAACCCACAAATA",5,45.64,9.42,-1.34,0.12,1.79,1.11,0.01,">1 nonsynonymous","N64T T100D N120F K128T",4
"lib1","SARS-CoV-2","AAACAACCCACACGTG",5,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129H T148S",2
"lib1","SARS-CoV-2","AAACAACCCCATCACT",1,55.66,8.99,-1.77,0.14,1.62,1.13,0.01,">1 nonsynonymous","S36I K56R Y91R",3
"lib1","SARS-CoV-2","AAACAACCCCCATAAG",3,1.03,NA,NA,NA,NA,NA,NA,"stop","E141M T201*",2
"lib1","SARS-CoV-2","AAACAACCCCGCCGTT",18,130.78,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y21L T63D I80Q S139T N151Q G155E",6
"lib1","SARS-CoV-2","AAACAACCGCCAAAAC",3,59.84,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","AAACAACCTAAACCCA",14,135.34,8.67,-2.09,0.09,2.81,1.06,0,">1 nonsynonymous","N157T F185M",2
"lib1","SARS-CoV-2","AAACAACCTATCTCAC",5,64.68,10.15,-0.61,0.08,2.87,1.04,0,">1 nonsynonymous","F44C K48N P197T",3
"lib1","SARS-CoV-2","AAACAACCTCCCAAAG",13,121.57,7.74,-3.02,0.14,1.5,1.13,0.01,">1 nonsynonymous","F44L S113I",2
"lib1","SARS-CoV-2","AAACAACCTTCTCCTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S36R N58S L95G R136M G146E",6
"lib1","SARS-CoV-2","AAACAACGAAATATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I28* C61A K94L I142* V173S",5
"lib1","SARS-CoV-2","AAACAACGCCCTCAAT",1,27.87,9.86,-0.91,0.11,2.51,1,0,">1 nonsynonymous","C31A N151T T201G",3
"lib1","SARS-CoV-2","AAACAACGCGACGCAG",1,11.7,7.39,-3.37,0.29,1.5,1.03,0.04,">1 nonsynonymous","K56I G86D V173T",3
"lib1","SARS-CoV-2","AAACAACGGACTATTG",9,0,NA,NA,NA,NA,NA,NA,"stop","T63* V103L G146S",3
"lib1","SARS-CoV-2","AAACAACGTTGAAGAA",4,36.53,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","R16F P96I I142R",3
"lib1","SARS-CoV-2","AAACAACTAATCTCAT",5,1.28,NA,NA,NA,NA,NA,NA,"stop","D34T Y39V G83*",3
"lib1","SARS-CoV-2","AAACAACTGGTAGAGT",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94Q G174T Y178S",3
"lib1","SARS-CoV-2","AAACAACTTACCCTAG",1,46.71,10.34,-0.42,0.08,2.87,1,0,"1 nonsynonymous","A22W",1
"lib1","SARS-CoV-2","AAACAACTTTACCAAA",4,25.08,8.86,-1.91,0.18,2.05,1.11,0.02,">1 nonsynonymous","T15K D90S Y143L",3
"lib1","SARS-CoV-2","AAACAACTTTATAAAG",1,19.47,9.02,-1.74,0.11,2.8,1.17,0,"1 nonsynonymous","G117D",1
"lib1","SARS-CoV-2","AAACAAGAAAATCCAA",1,28.22,8.41,-2.35,0.25,1.5,1.13,0.02,">1 nonsynonymous","A14C A42D Y91K G152S",4
"lib1","SARS-CoV-2","AAACAAGAAATCAGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","N4* F99N T170S",3
"lib1","SARS-CoV-2","AAACAAGACAAGTCAA",1,19.64,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","D34L A42S Q84N G101L P177Y",5
"lib1","SARS-CoV-2","AAACAAGACACGCCTT",7,30.02,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","V37T G86E S113R P197V",4
"lib1","SARS-CoV-2","AAACAAGACGACTCCC",6,82.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1S G146F Y159L",3
"lib1","SARS-CoV-2","AAACAAGAGACATGAC",4,103.4,10.04,-0.73,0.09,2.27,1.03,0,">1 nonsynonymous","D90I P149D",2
"lib1","SARS-CoV-2","AAACAAGATGTAACGC",2,84.38,10.7,-0.06,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACAAGATGTCTAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","F12H I104*",2
"lib1","SARS-CoV-2","AAACAAGCAAATTATA",6,14.07,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","V20M V103H",2
"lib1","SARS-CoV-2","AAACAAGCAATTTAAA",1,8.21,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K87W G117I T140S C158L",4
"lib1","SARS-CoV-2","AAACAAGCCAAGACAA",5,24.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S43C A81N L125D V173H L183K",5
"lib1","SARS-CoV-2","AAACAAGGAAAATCCA",4,17.3,6,-4.76,2,1.5,1.17,0.05,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","AAACAAGGGACAAGGT",2,16.41,6,-4.76,2,3,1.14,0,">1 nonsynonymous","D68S V77S",2
"lib1","SARS-CoV-2","AAACAAGTCAGCTAGA",2,0.62,NA,NA,NA,NA,NA,NA,"stop","T55* N107G K132R",3
"lib1","SARS-CoV-2","AAACAAGTGTCTAAGT",1,16.85,10.25,-0.51,0.12,2.51,1.01,0.01,">1 nonsynonymous","D34P K56I",2
"lib1","SARS-CoV-2","AAACAAGTTTCAATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","C31L N58M N92V K199*",4
"lib1","SARS-CoV-2","AAACAATAAAAACAAT",1,30.87,10.69,-0.07,0.05,2.88,1.08,0,">1 nonsynonymous","I2M K48L P54R V153Q",4
"lib1","SARS-CoV-2","AAACAATAAAGACTCC",4,34.76,8.28,-2.49,0.15,1.86,1.11,0.01,">1 nonsynonymous","I2T I104S N109Y",3
"lib1","SARS-CoV-2","AAACAATAAATAGCCA",4,1.3,NA,NA,NA,NA,NA,NA,"stop","S45* D112Y",2
"lib1","SARS-CoV-2","AAACAATAACAAGAAC",2,58.57,10.48,-0.29,0.06,2.98,1,0,">1 nonsynonymous","I28Y K56R K87A",3
"lib1","SARS-CoV-2","AAACAATAAGAGTGGT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H G146V",2
"lib1","SARS-CoV-2","AAACAATAAGCTAAAA",3,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S N64Y",2
"lib1","SARS-CoV-2","AAACAATAAGGGACAG",3,54.07,10.2,-0.57,0.05,2.87,1.06,0,">1 nonsynonymous","C6T S43V T85S",3
"lib1","SARS-CoV-2","AAACAATAATTAAAGC",4,51.82,10.7,-0.06,0.08,2.87,1.08,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","AAACAATACACACTAC",2,65.82,7.84,-2.92,0.26,1.5,1.14,0.02,">1 nonsynonymous","S45Y Y119S T148L P169C T201W",5
"lib1","SARS-CoV-2","AAACAATACGAGTTTC",2,24.53,8.9,-1.87,0.09,2.85,1.15,0,">1 nonsynonymous","K87A F156N",2
"lib1","SARS-CoV-2","AAACAATAGAACAAAT",3,10.3,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","G9Q R27V S41K Y50A N58F",5
"lib1","SARS-CoV-2","AAACAATAGATACATT",2,15.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13V S19L Y35A",3
"lib1","SARS-CoV-2","AAACAATAGCAATGAT",6,65.44,9.69,-1.07,0.06,2.86,1.04,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","AAACAATATATAAGGG",1,7.34,6,-4.76,1.13,3,1.03,0.01,">1 nonsynonymous","G9I F62I V77K K94H F99R L122F Y123P G152P",8
"lib1","SARS-CoV-2","AAACAATATTAAGTAG",2,11.03,10,-0.76,0.3,2.2,1.12,0.03,">1 nonsynonymous","F44P D97N F160Q",3
"lib1","SARS-CoV-2","AAACAATCACCTTTTA",3,3.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","AAACAATCATAACATT",3,48.45,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","L95N Y119P A190V",3
"lib1","SARS-CoV-2","AAACAATCCCTGCGGC",3,17.15,9.46,-1.3,0.11,2.86,1.06,0.01,">1 nonsynonymous","G117S T148A",2
"lib1","SARS-CoV-2","AAACAATCTTATGTAA",2,26.66,10.64,-0.12,0.09,2.92,1.01,0,">1 nonsynonymous","S43P D90R",2
"lib1","SARS-CoV-2","AAACAATGCATCAATC",5,18.11,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","C49S S129N Y165G",3
"lib1","SARS-CoV-2","AAACAATGGATATATT",4,0.35,NA,NA,NA,NA,NA,NA,"stop","S41L Q84G D90V T140*",4
"lib1","SARS-CoV-2","AAACAATGTACATACG",3,26.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P82C G101T F126M K198T",4
"lib1","SARS-CoV-2","AAACAATGTTCGGCCA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53R P96S",2
"lib1","SARS-CoV-2","AAACAATTAAATTCTT",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101E N120S T201M",3
"lib1","SARS-CoV-2","AAACAATTAATATGGA",5,35.41,6,-4.76,2,1.5,1.2,0.08,">1 nonsynonymous","G9T K26M C61G W106S Y143S",5
"lib1","SARS-CoV-2","AAACAATTACAATCGG",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L F17I C49L Y91L",4
"lib1","SARS-CoV-2","AAACAATTCACAACAT",2,0.64,NA,NA,NA,NA,NA,NA,"stop","I2L D68V D90* K128Y P149*",5
"lib1","SARS-CoV-2","AAACAATTGAAAGATG",3,24.26,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S36C T55I F62L K87R L125Y N151I",6
"lib1","SARS-CoV-2","AAACAATTGAATTACT",1,16.41,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R27M Y35V A89R",3
"lib1","SARS-CoV-2","AAACAATTGCCGCATG",6,1.2,NA,NA,NA,NA,NA,NA,"stop","A89D G146*",2
"lib1","SARS-CoV-2","AAACAATTGTTGAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","D59A G174*",2
"lib1","SARS-CoV-2","AAACAATTTAAAAATT",4,69.63,10.87,0.1,0.06,2.93,1.02,0,"1 nonsynonymous","R27E",1
"lib1","SARS-CoV-2","AAACACAAAGATGCAC",4,25.54,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y93L F134S",2
"lib1","SARS-CoV-2","AAACACAAATTTAAAA",4,0.59,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","AAACACAACTAACGCA",7,36.32,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Q79R R127T N157E",3
"lib1","SARS-CoV-2","AAACACAAGAAACAAG",2,2.62,NA,NA,NA,NA,NA,NA,"stop","D97I T148* V173M",3
"lib1","SARS-CoV-2","AAACACAAGCCATCAG",4,5.88,10.06,-0.7,0.23,2.74,1.01,0.03,">1 nonsynonymous","L60S Q84Y",2
"lib1","SARS-CoV-2","AAACACAAGTGCTGAT",4,21.42,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F44L D90I C102F G174M T201M",5
"lib1","SARS-CoV-2","AAACACAAGTTTAGAA",6,61.32,10.8,0.03,0.09,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACACAATCTATAAT",5,59.85,10.09,-0.67,0.06,2.78,1.02,0,">1 nonsynonymous","Y35S T55S P149L",3
"lib1","SARS-CoV-2","AAACACAATGAGTAGT",14,116.01,10.33,-0.44,0.05,2.77,1.01,0,">1 nonsynonymous","D34H T201L",2
"lib1","SARS-CoV-2","AAACACACAATTAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D Y91K L122G",3
"lib1","SARS-CoV-2","AAACACACCCACTAAA",7,51.64,9.63,-1.13,0.09,1.77,1.11,0,">1 nonsynonymous","D59I K94N",2
"lib1","SARS-CoV-2","AAACACACGCTAACCG",4,52.73,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","F99Q C158S G166L",3
"lib1","SARS-CoV-2","AAACACACTTATAAGT",13,130.41,10.19,-0.57,0.07,2.82,1.02,0,">1 nonsynonymous","V32R D90Y L122W",3
"lib1","SARS-CoV-2","AAACACAGAACGCTAA",1,21.1,10.83,0.06,0.07,2.94,1.02,0,"1 nonsynonymous","T140L",1
"lib1","SARS-CoV-2","AAACACAGACCTTTGT",1,169.72,6,-4.76,1.82,1.5,1.12,0,">1 nonsynonymous","L5F F44I S53E G83Y A89V S129V I142R",7
"lib1","SARS-CoV-2","AAACACAGACTGTTAT",7,89.99,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","S29L K128N P133Q Y143P T148R N171C",6
"lib1","SARS-CoV-2","AAACACAGGTATGGGT",6,53.81,6,-4.76,1.87,1.5,1.14,0.01,">1 nonsynonymous","E10G S139C Q144C",3
"lib1","SARS-CoV-2","AAACACAGTATTTTCA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","S41N V77* D90T I142P",4
"lib1","SARS-CoV-2","AAACACATAAGAATTT",4,24.78,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A14D N118C F126C G146A",4
"lib1","SARS-CoV-2","AAACACATGAAAAAAG",2,18.28,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A14G N64L D90Y Q176F",4
"lib1","SARS-CoV-2","AAACACCAAATGATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L Y50F F99T C150V L162S",5
"lib1","SARS-CoV-2","AAACACCAACGCATAT",1,5.2,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2E D112N Y123R",3
"lib1","SARS-CoV-2","AAACACCAGGCCAACA",3,24.87,10.71,-0.05,0.06,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACACCATATTATTT",1,8.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34L G155Y H189V",3
"lib1","SARS-CoV-2","AAACACCATGTCTTAG",5,31.16,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K56T G101D Q144W P149L",4
"lib1","SARS-CoV-2","AAACACCCAGTATTCA",4,50.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T N30T D90Y",3
"lib1","SARS-CoV-2","AAACACCCCACCTGTT",3,5.05,10.45,-0.32,0.24,3,1.01,0,">1 nonsynonymous","N58E K114A S129C",3
"lib1","SARS-CoV-2","AAACACCCCCCAAAAT",5,186.16,10.4,-0.36,0.05,2.9,1.02,0,">1 nonsynonymous","K48E T63D Q144G",3
"lib1","SARS-CoV-2","AAACACCCCCGATACA",2,64.01,8.77,-2,0.08,2.67,1.12,0,">1 nonsynonymous","C6G T15L E154F",3
"lib1","SARS-CoV-2","AAACACCCTCAAAAAC",1,18.18,8.74,-2.03,0.28,1.82,1.18,0.03,">1 nonsynonymous","C49S V115D",2
"lib1","SARS-CoV-2","AAACACCGAGAAAGCT",3,30,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D98W W106K G146I",3
"lib1","SARS-CoV-2","AAACACCGAGTAACTT",2,14.98,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","N1S E10V I28P L60V D68E Y121L G155D",7
"lib1","SARS-CoV-2","AAACACCGGCTTCATA",2,40.43,9.81,-0.95,0.18,1.93,1.03,0.01,">1 nonsynonymous","Q79N Y123Q",2
"lib1","SARS-CoV-2","AAACACCTATCTATCC",3,51.91,10.76,0,0.06,2.9,1.03,0,">1 nonsynonymous","R16F E141G",2
"lib1","SARS-CoV-2","AAACACCTCCGCAGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","P7R T46M L60* N120T K199P",5
"lib1","SARS-CoV-2","AAACACCTGAGTCATA",9,9.18,NA,NA,NA,NA,NA,NA,"stop","S53R K87* I142L",3
"lib1","SARS-CoV-2","AAACACCTTAAATGTT",2,114.55,10.18,-0.59,0.05,2.79,1.05,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","AAACACCTTCACATTA",5,1.87,NA,NA,NA,NA,NA,NA,"stop","L60C G83E W106K K128* E141R",5
"lib1","SARS-CoV-2","AAACACGAAACTTCCT",1,51.66,10.55,-0.21,0.06,2.89,1.06,0,">1 nonsynonymous","F44H T55L",2
"lib1","SARS-CoV-2","AAACACGAATGATAAC",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K V103L G146M L183P T201L",5
"lib1","SARS-CoV-2","AAACACGACCAACCAA",2,1.58,NA,NA,NA,NA,NA,NA,"stop","F44Q T55S D75V V173H S200*",5
"lib1","SARS-CoV-2","AAACACGATAAATTAA",1,20.93,10.81,0.05,0.09,3,1.01,0,"1 nonsynonymous","R16I",1
"lib1","SARS-CoV-2","AAACACGATAACAAAT",5,169.71,9.12,-1.64,0.11,1.83,1.09,0,">1 nonsynonymous","Y178K L187F",2
"lib1","SARS-CoV-2","AAACACGATATAGATT",5,0.46,NA,NA,NA,NA,NA,NA,"stop","G86S L122* N130S",3
"lib1","SARS-CoV-2","AAACACGATTCCCTGA",6,61.13,10.46,-0.3,0.06,2.84,1.06,0,">1 nonsynonymous","N40G D90E A190T",3
"lib1","SARS-CoV-2","AAACACGCCTAACAAA",14,180.5,10.71,-0.05,0.05,2.91,1.05,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","AAACACGCGTGCACCA",5,52.5,6.07,-4.69,1.18,1.5,1.23,0.04,">1 nonsynonymous","L95V G116L A145L L162I Y178G",5
"lib1","SARS-CoV-2","AAACACGGATGCAAAA",5,18.1,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F8L V103P P149L",3
"lib1","SARS-CoV-2","AAACACGGCCAGAGAA",3,35.05,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","W106F G172N",2
"lib1","SARS-CoV-2","AAACACGGTCTTTTCG",2,21.11,7.76,-3.01,0.51,1.5,1.14,0.07,">1 nonsynonymous","G101L P149E T201N",3
"lib1","SARS-CoV-2","AAACACGGTTTGTCAC",3,42.15,10.78,0.01,0.05,2.92,1.04,0,">1 nonsynonymous","T55Q E141Q",2
"lib1","SARS-CoV-2","AAACACGTTTGCCACA",3,43.07,10.2,-0.56,0.05,2.63,1,0,">1 nonsynonymous","K56R L131V S139M",3
"lib1","SARS-CoV-2","AAACACTAAATGGTAA",5,33.79,6.96,-3.8,0.5,1.5,1.12,0.06,">1 nonsynonymous","A18T T63S L122P P149W",4
"lib1","SARS-CoV-2","AAACACTATGATATGA",2,13.08,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C31S G174W L183T",3
"lib1","SARS-CoV-2","AAACACTATTTTAGTT",5,73.17,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C31K S36F N64G D90L I142Y",5
"lib1","SARS-CoV-2","AAACACTCAACCATGG",1,5.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S113T F167S",2
"lib1","SARS-CoV-2","AAACACTCAATTTAAA",5,111.26,10.62,-0.15,0.04,2.9,1.04,0,">1 nonsynonymous","V37A T63W",2
"lib1","SARS-CoV-2","AAACACTCAGACACAC",9,151.65,10.79,0.03,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACACTCCAACCACC",3,34.31,8.6,-2.16,0.33,1.5,1.07,0.04,">1 nonsynonymous","A67H P191F",2
"lib1","SARS-CoV-2","AAACACTCGCTAGCAA",4,18.72,9.04,-1.72,0.26,1.62,1.11,0.03,">1 nonsynonymous","G51Y N110T E141M",3
"lib1","SARS-CoV-2","AAACACTGAGAAAATC",5,62.43,10.08,-0.68,0.14,2.13,1.02,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","AAACACTGAGTAGCAA",1,34.01,9.98,-0.78,0.11,2.38,1.07,0.01,"1 nonsynonymous","V11C",1
"lib1","SARS-CoV-2","AAACACTGATAAAACC",4,62.28,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T63Y Q84L P96Y N151H P177G K198G",6
"lib1","SARS-CoV-2","AAACACTGGAAGCATA",1,29.14,10.48,-0.28,0.16,2.73,1.04,0.01,"1 nonsynonymous","K87V",1
"lib1","SARS-CoV-2","AAACACTGGATCCGCG",7,130.2,10.38,-0.38,0.03,2.85,1.02,0,">1 nonsynonymous","D90F T100I Q163S",3
"lib1","SARS-CoV-2","AAACACTGTATAAACA",3,44.6,8.49,-2.27,0.1,2.92,1.01,0.01,">1 nonsynonymous","N157F T201Y",2
"lib1","SARS-CoV-2","AAACACTTAATCGTAC",5,75.52,10.35,-0.41,0.04,2.92,1,0,"1 nonsynonymous","P7F",1
"lib1","SARS-CoV-2","AAACACTTACTTAAAT",2,56.77,10.79,0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACACTTCTATTAGC",6,51.79,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","N40L F47L V52D F126K Q168G",5
"lib1","SARS-CoV-2","AAACACTTGTGCATCA",4,35.94,6,-4.76,2,3,1.17,0.01,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","AAACACTTTATCGCTG",2,34.6,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","L57G F99T Q168L",3
"lib1","SARS-CoV-2","AAACAGAAAAAGATTT",5,67.05,10,-0.76,0.11,2.33,1.05,0.01,">1 nonsynonymous","D34I S41W F62S V173M",4
"lib1","SARS-CoV-2","AAACAGAAAACCATCA",5,70.05,9.04,-1.72,0.17,1.79,1.16,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","AAACAGAAACTAAGAA",6,41.21,6.12,-4.65,0.74,1.5,1.22,0.02,">1 nonsynonymous","L60E P82N",2
"lib1","SARS-CoV-2","AAACAGAAAGTTTTAT",8,38.59,8.35,-2.42,0.19,1.5,1.06,0.01,">1 nonsynonymous","L38S P161E",2
"lib1","SARS-CoV-2","AAACAGAACCCTTGAT",1,34.03,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F12T I104F L131R Y143L H189F",5
"lib1","SARS-CoV-2","AAACAGAACGACGGGG",7,179.87,10.78,0.02,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACAGAAGATATCCA",5,34.84,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","Y21S Y50A P96T N120L E141R",5
"lib1","SARS-CoV-2","AAACAGAAGTCGAACT",3,55.29,10.55,-0.22,0.05,2.84,1.08,0,">1 nonsynonymous","L5S P149I S200H",3
"lib1","SARS-CoV-2","AAACAGAAGTTAGAAC",4,66.69,10.59,-0.17,0.04,2.93,1.07,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","AAACAGAATCGCGACC",8,200.51,9.58,-1.18,0.12,1.77,1.13,0.01,">1 nonsynonymous","K26G S139K",2
"lib1","SARS-CoV-2","AAACAGAATGAAACCC",5,15.96,9.64,-1.12,0.2,1.86,1.22,0.02,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","AAACAGACAGGCTCTA",1,16.93,6,-4.76,1.75,1.5,1.13,0.04,">1 nonsynonymous","T55C P82C G166C",3
"lib1","SARS-CoV-2","AAACAGACATATTCTT",4,72.2,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","K26M V77H Y119A G152T",4
"lib1","SARS-CoV-2","AAACAGACCATTCCTA",1,27.68,8.23,-2.54,0.22,1.5,1.01,0.02,">1 nonsynonymous","D68E E141T",2
"lib1","SARS-CoV-2","AAACAGACCGCATAGG",1,28.23,10.82,0.05,0.08,2.89,1.05,0,">1 nonsynonymous","V32Q T55D",2
"lib1","SARS-CoV-2","AAACAGAGAACTGGTA",2,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E V37E",2
"lib1","SARS-CoV-2","AAACAGAGTGTATGCA",1,55.35,10.21,-0.55,0.06,2.9,1,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","AAACAGATACGAATAG",1,0.22,NA,NA,NA,NA,NA,NA,"stop","V115*",1
"lib1","SARS-CoV-2","AAACAGATAGACTGTA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","F17E K87* P149M L183S",4
"lib1","SARS-CoV-2","AAACAGATATTTGATA",2,16.95,10.62,-0.14,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACAGATGCTGCGTA",6,1.56,NA,NA,NA,NA,NA,NA,"stop","A22L S43C D90P L95S T100*",5
"lib1","SARS-CoV-2","AAACAGATGTGAGTAA",2,28.1,10.72,-0.05,0.09,2.94,1.03,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","AAACAGATTACAAGAA",4,63.58,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6V D112V P161V",3
"lib1","SARS-CoV-2","AAACAGCAAGACCTCT",9,110.29,10.56,-0.2,0.04,2.95,1,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","AAACAGCAAGCAAAAC",9,56.7,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","E10V G86S C102H P161R A190T",5
"lib1","SARS-CoV-2","AAACAGCAATCACATA",3,5.6,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","A89C F99V R124E",3
"lib1","SARS-CoV-2","AAACAGCACGCCGCTT",6,67.16,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V115C G155Y T170I",3
"lib1","SARS-CoV-2","AAACAGCCAAGAATAC",6,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I Q79S K87S N92L",4
"lib1","SARS-CoV-2","AAACAGCCAGAACCGT",9,86.79,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45I D68G P149S",3
"lib1","SARS-CoV-2","AAACAGCGAGACGATT",1,14.07,6.27,-4.5,0.42,3,1.21,0.01,">1 nonsynonymous","N13E N40P I88T K114S",4
"lib1","SARS-CoV-2","AAACAGCTACAGCACC",3,5.5,6.64,-4.12,1.31,1.5,1.1,0.04,">1 nonsynonymous","P7Q V65S I80V F99T F160L",5
"lib1","SARS-CoV-2","AAACAGCTATGAGTAT",1,1.28,NA,NA,NA,NA,NA,NA,"stop","D98K R136* L162A",3
"lib1","SARS-CoV-2","AAACAGCTGCAACTCA",3,27.68,10.14,-0.62,0.13,2.59,1,0.01,">1 nonsynonymous","L5I V173S",2
"lib1","SARS-CoV-2","AAACAGGAAGATTTCT",2,12.42,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","D112L N120K G155V",3
"lib1","SARS-CoV-2","AAACAGGAATACTCTT",11,104.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68I A81L S139T",3
"lib1","SARS-CoV-2","AAACAGGAGACATGGA",2,4.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAACAGGAGGGTACCA",6,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48E L122P P169H",3
"lib1","SARS-CoV-2","AAACAGGAGTAAAAAC",2,7.25,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A42N A89T L95T L122R",4
"lib1","SARS-CoV-2","AAACAGGATTAAGGCA",4,26.94,10.86,0.09,0.08,2.84,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACAGGCCGAAGATA",1,57.54,10.8,0.04,0.06,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACAGGCTTATCATT",5,15.21,6,-4.76,1.19,3,1.14,0.01,">1 nonsynonymous","V153A C158V",2
"lib1","SARS-CoV-2","AAACAGGGGCAAAGGA",5,17.03,10.73,-0.03,0.09,3,1.01,0,">1 nonsynonymous","N24T K94H",2
"lib1","SARS-CoV-2","AAACAGGTAACCGGCT",17,221.49,10.75,-0.01,0.04,2.9,1.06,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","AAACAGGTAGATTTGG",1,41.51,10.42,-0.34,0.04,2.9,1.01,0,">1 nonsynonymous","D90L N171S",2
"lib1","SARS-CoV-2","AAACAGGTCTAGCTAT",8,59.93,9.31,-1.46,0.12,2.84,1.08,0,">1 nonsynonymous","N4T T63I Y119S",3
"lib1","SARS-CoV-2","AAACAGGTTCAAGCGA",8,147.37,10.34,-0.43,0.04,2.86,1.05,0,">1 nonsynonymous","D59T V77M",2
"lib1","SARS-CoV-2","AAACAGTAAAAGAAAC",1,23.87,10.35,-0.42,0.05,2.93,1,0,">1 nonsynonymous","P54N G116A",2
"lib1","SARS-CoV-2","AAACAGTAATACATAT",12,95.7,10.22,-0.55,0.06,2.83,1.01,0,">1 nonsynonymous","E10C C61V",2
"lib1","SARS-CoV-2","AAACAGTAATGGTGTC",3,61.5,10.72,-0.04,0.03,2.97,1,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","AAACAGTAATTCATTA",4,19.74,6.4,-4.36,0.42,2.8,1.11,0.01,">1 nonsynonymous","S41D G86D V103E R179E",4
"lib1","SARS-CoV-2","AAACAGTACATTGATG",2,43.39,10.02,-0.74,0.1,2.56,1.07,0,">1 nonsynonymous","A14N D90L V115M",3
"lib1","SARS-CoV-2","AAACAGTATTCCTGCT",2,64.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K26C K56S D112Y Q168G L188I",5
"lib1","SARS-CoV-2","AAACAGTGGGACTTCG",21,211.52,10.72,-0.04,0.05,2.94,1.02,0,">1 nonsynonymous","L131V K199W",2
"lib1","SARS-CoV-2","AAACAGTGTCATTTGA",6,135.68,10.68,-0.09,0.04,2.93,1.03,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","AAACAGTGTTCAATAT",2,109.75,10.2,-0.57,0.06,2.59,1.02,0,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","AAACAGTTAAATAAAA",6,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V A42N F62Y V71A N120E Q168K",6
"lib1","SARS-CoV-2","AAACAGTTACCAGAGT",8,173.91,8.68,-2.08,0.07,2.9,1.07,0,">1 nonsynonymous","F126R P149M",2
"lib1","SARS-CoV-2","AAACAGTTGCAACCCA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q G117M A145L V173G E186I",5
"lib1","SARS-CoV-2","AAACAGTTTAATACAA",2,9.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90K N120Y V182S",3
"lib1","SARS-CoV-2","AAACATAAAAACATTG",2,7.68,8.47,-2.3,0.14,2.79,1.03,0,">1 nonsynonymous","T63V A145Y",2
"lib1","SARS-CoV-2","AAACATAAAAACGAGA",8,118.51,8.42,-2.34,0.11,2.68,1.03,0,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","AAACATAAACACAGGA",10,39.83,9.74,-1.02,0.26,1.5,1,0.04,">1 nonsynonymous","N64T V181F",2
"lib1","SARS-CoV-2","AAACATAAAGTACTCT",2,25.79,7.52,-3.24,0.37,1.5,1.12,0.06,">1 nonsynonymous","L5S F17R F70N R124T F156I Q163R T170S",7
"lib1","SARS-CoV-2","AAACATAACATCATGG",2,17.68,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D68T L95M F99H C150W",4
"lib1","SARS-CoV-2","AAACATAACCAAGACA",5,40.88,10.79,0.03,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACATAAGTATCCCT",2,148.76,8.73,-2.04,0.06,2.85,1.08,0,">1 nonsynonymous","G146C V153L",2
"lib1","SARS-CoV-2","AAACATAATAAGTATA",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G S29R K114M",3
"lib1","SARS-CoV-2","AAACATACAACAAACA",8,67.7,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N4E Y35G F70N N107R Y119T P133V",6
"lib1","SARS-CoV-2","AAACATACAACTGGGA",3,90.32,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64P G74W N120P P133T T140K",5
"lib1","SARS-CoV-2","AAACATACCAAAGGGA",5,1.07,NA,NA,NA,NA,NA,NA,"stop","V11F N64Y G86A V103* C158I Q168R",6
"lib1","SARS-CoV-2","AAACATACCTAGCACC",6,157.85,6.31,-4.45,0.59,1.5,1.15,0.03,">1 nonsynonymous","V77E D90Y F160L P177E K199M",5
"lib1","SARS-CoV-2","AAACATACCTCATACT",3,0.3,NA,NA,NA,NA,NA,NA,"stop","A67R G86S D98S K114*",4
"lib1","SARS-CoV-2","AAACATACCTTCAGAG",2,71.64,10.65,-0.11,0.07,2.9,1.07,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","AAACATACGTATGAAC",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S164K T170Q",2
"lib1","SARS-CoV-2","AAACATACTGCAATTA",3,71.55,6.07,-4.69,0.66,1.5,1.12,0.01,">1 nonsynonymous","R27L A81G N107D G155N N157S",5
"lib1","SARS-CoV-2","AAACATAGAAGTGCCT",6,43.07,10.72,-0.04,0.04,2.96,1,0,">1 nonsynonymous","V37L F134M",2
"lib1","SARS-CoV-2","AAACATAGATAAGCAT",3,55.13,10.73,-0.04,0.05,2.96,1,0,"1 nonsynonymous","F126L",1
"lib1","SARS-CoV-2","AAACATAGGGTGATTA",9,89.51,9.72,-1.04,0.12,1.84,1.11,0.01,">1 nonsynonymous","D98I A105S S139H",3
"lib1","SARS-CoV-2","AAACATAGGTATACTA",4,41.97,6.08,-4.69,0.6,1.5,1.11,0.01,">1 nonsynonymous","S53G F99L N107R",3
"lib1","SARS-CoV-2","AAACATATAAGAACAT",6,1.51,NA,NA,NA,NA,NA,NA,"stop","Y35R G86C K114* F126L F160E",5
"lib1","SARS-CoV-2","AAACATATACGAGAAT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Y F99Y R124N N171L K198P",5
"lib1","SARS-CoV-2","AAACATATAGCAACTT",14,96.34,9.68,-1.08,0.13,2.15,1.09,0.01,">1 nonsynonymous","I2G K48G T55Y N64E",4
"lib1","SARS-CoV-2","AAACATATGAAGCTAT",1,113.52,10.66,-0.1,0.05,2.95,1.03,0,">1 nonsynonymous","P7R R27K T148S",3
"lib1","SARS-CoV-2","AAACATATGACTTAAT",1,1.19,NA,NA,NA,NA,NA,NA,"stop","Y35K V71A K128*",3
"lib1","SARS-CoV-2","AAACATATGTAAATTA",2,20.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y165A F185S",2
"lib1","SARS-CoV-2","AAACATATTGACACAT",1,17.8,9.05,-1.72,0.13,2.56,1.17,0.01,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","AAACATATTGGCAAAA",4,2.76,NA,NA,NA,NA,NA,NA,"stop","A42* P54V F99E S129L N171S",5
"lib1","SARS-CoV-2","AAACATCAAGCAGCAA",1,23.8,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63S A81H N92H S113C",4
"lib1","SARS-CoV-2","AAACATCAAGGAAACA",1,40.43,10.52,-0.25,0.11,2.9,1.05,0,"1 nonsynonymous","K128C",1
"lib1","SARS-CoV-2","AAACATCAAGTGTCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L W106C",2
"lib1","SARS-CoV-2","AAACATCAATTGAACA",1,0.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","AAACATCACAACCCAC",2,50.88,10.75,-0.01,0.08,2.94,1,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","AAACATCACAGAAAAT",2,39.07,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N40L G51P A67R G101S A105Y K132S R179A",7
"lib1","SARS-CoV-2","AAACATCACCCAGTCC",2,84.04,9.2,-1.56,0.1,2.63,1.09,0,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","AAACATCAGAGACTGT",2,46.31,10.77,0.01,0.05,2.92,1.02,0,">1 nonsynonymous","Y35L S139R",2
"lib1","SARS-CoV-2","AAACATCCAGATAGCC",12,126.3,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5H N64L I88N I104S",4
"lib1","SARS-CoV-2","AAACATCCCAATAAGT",6,124.49,10.08,-0.68,0.04,2.67,1.03,0,">1 nonsynonymous","I2Y E10T D59L",3
"lib1","SARS-CoV-2","AAACATCCCTACATGC",4,24.46,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12Y G101A",2
"lib1","SARS-CoV-2","AAACATCCCTCTGACG",6,6.89,9.11,-1.65,0.29,1.86,1,0.03,">1 nonsynonymous","T15L L57K F62T T100N C158N",5
"lib1","SARS-CoV-2","AAACATCCTAGACTGG",1,26.27,8.34,-2.43,0.25,1.5,1.13,0.03,">1 nonsynonymous","F17T S139L",2
"lib1","SARS-CoV-2","AAACATCGAACCTAAA",1,16.58,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S43I L95Q S129A I138S G146V Y165R",6
"lib1","SARS-CoV-2","AAACATCGAATAAAAA",6,25.41,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","C6L C61I D68L",3
"lib1","SARS-CoV-2","AAACATCTAACCCATT",1,75.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A G86D",2
"lib1","SARS-CoV-2","AAACATCTAAGTCAAA",21,129.28,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D59H F70V",2
"lib1","SARS-CoV-2","AAACATCTCAAAACGG",10,61.89,8.1,-2.66,0.36,1.5,1,0.04,">1 nonsynonymous","Y93L T148A",2
"lib1","SARS-CoV-2","AAACATGAAACCCCCA",1,20.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M S53L Y93C S184Y K198N",5
"lib1","SARS-CoV-2","AAACATGAACGGTAAA",13,150.01,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9Q Y39W N92L",3
"lib1","SARS-CoV-2","AAACATGAAGAATAAA",2,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L S45F F70I G83I D98N I142R N151I",7
"lib1","SARS-CoV-2","AAACATGAATAACGAT",2,1.02,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","AAACATGACCAATTTA",2,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P T170E",2
"lib1","SARS-CoV-2","AAACATGAGAGGGCGG",4,10.38,10.17,-0.59,0.12,2.95,1,0.01,">1 nonsynonymous","T15K L162F",2
"lib1","SARS-CoV-2","AAACATGATCAACGTA",5,14.46,10.75,-0.02,0.07,2.93,1,0,">1 nonsynonymous","L95V K199H",2
"lib1","SARS-CoV-2","AAACATGATTGATCAA",1,11.08,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S19F N107M Y121E K128I",4
"lib1","SARS-CoV-2","AAACATGCAATCATAT",1,25.19,10.98,0.22,0.15,2.85,1.02,0.01,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","AAACATGCTAACCGAT",4,10.43,6.54,-4.23,0.35,1.5,1.08,0.02,">1 nonsynonymous","G9A G74I",2
"lib1","SARS-CoV-2","AAACATGCTACAAGTG",6,22.7,10.08,-0.68,0.17,2.05,1.13,0.01,">1 nonsynonymous","G9V Y91I",2
"lib1","SARS-CoV-2","AAACATGGACAGTAAT",2,41.36,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S43N G172M",2
"lib1","SARS-CoV-2","AAACATGGTAAGTGGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M Y35S P149A",3
"lib1","SARS-CoV-2","AAACATGGTTCCATTC",1,38.62,10.53,-0.24,0.11,2.83,1.02,0.01,">1 nonsynonymous","E154L Q168F",2
"lib1","SARS-CoV-2","AAACATGTCAATCAGA",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T F47K N64D",3
"lib1","SARS-CoV-2","AAACATGTGTAATTGA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","E10Y F17L W23G Y39I S69* Y91S S129L",7
"lib1","SARS-CoV-2","AAACATTAAAATATAT",1,15.39,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","C49G D97V S184F",3
"lib1","SARS-CoV-2","AAACATTAAGGATAAA",4,64.07,10.79,0.03,0.09,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACATTAATACATAG",3,36.97,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1G A14S N118E A145N C150S",5
"lib1","SARS-CoV-2","AAACATTACAGGGTGA",5,31.58,7.91,-2.86,0.17,1.5,1.11,0.01,">1 nonsynonymous","R27A T100L P133F Q176R",4
"lib1","SARS-CoV-2","AAACATTACCGTCACA",4,26.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5D A67S I72S D90Y L95I N120Y K132Q T148F",8
"lib1","SARS-CoV-2","AAACATTAGTGTGATT",7,79.74,8.32,-2.45,0.17,2.01,1.14,0.01,">1 nonsynonymous","S19E T148Y F156H",3
"lib1","SARS-CoV-2","AAACATTAGTTAAAAA",5,100.92,9.36,-1.4,0.09,2.15,1.14,0,">1 nonsynonymous","N40F G83S G174R",3
"lib1","SARS-CoV-2","AAACATTAGTTTACAA",9,146.95,10.33,-0.44,0.04,2.69,1.03,0,">1 nonsynonymous","D90M Y123W",2
"lib1","SARS-CoV-2","AAACATTATCAACATA",4,10.47,6.57,-4.2,0.84,1.5,1.22,0.07,">1 nonsynonymous","I104R E141D",2
"lib1","SARS-CoV-2","AAACATTATTTAATCC",4,31.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19L T55W V77K",3
"lib1","SARS-CoV-2","AAACATTCAAATTACT",3,0,NA,NA,NA,NA,NA,NA,"stop","L5R T85P P96H G174*",4
"lib1","SARS-CoV-2","AAACATTCATTCTACA",1,10.77,6.46,-4.31,1.76,1.5,1.28,0.04,">1 nonsynonymous","T46L R124D G174F",3
"lib1","SARS-CoV-2","AAACATTCCCCCCCTT",2,16.02,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","E10K L38D Y165R A190I",4
"lib1","SARS-CoV-2","AAACATTCGAAGGTAA",4,23.78,10.81,0.05,0.1,2.85,1.02,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","AAACATTCGGTCTGTT",1,57.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11E Y35S A42D Y123M Y175K",5
"lib1","SARS-CoV-2","AAACATTGCAGTTACT",6,27.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1C G86C C102M Q144S V180F",5
"lib1","SARS-CoV-2","AAACATTGGGGGACTA",2,58.33,10.72,-0.05,0.05,2.95,1.03,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","AAACATTGGGTGCGTA",1,68.69,10.7,-0.06,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACATTGTAGCCGGC",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S C61M",2
"lib1","SARS-CoV-2","AAACATTGTATGCACC",3,34.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T63M N92Y I142E G166Q",4
"lib1","SARS-CoV-2","AAACATTTAATACATA",2,102.25,10.05,-0.72,0.07,2.81,1.05,0,">1 nonsynonymous","T85I G155N",2
"lib1","SARS-CoV-2","AAACATTTATGAAACC",6,10.03,8.81,-1.96,0.28,1.91,1.17,0.03,">1 nonsynonymous","I2P F44C L57F I104W",4
"lib1","SARS-CoV-2","AAACATTTATTGTACT",5,160.49,8.66,-2.1,0.22,1.5,1.01,0.02,">1 nonsynonymous","L38A S45L F134G K198F",4
"lib1","SARS-CoV-2","AAACATTTCTTTGACT",4,52.8,6,-4.76,1.64,1.5,1.14,0.02,">1 nonsynonymous","P96C G146R",2
"lib1","SARS-CoV-2","AAACATTTTAGGGACA",5,82.2,7.22,-3.54,0.13,1.61,1.14,0,">1 nonsynonymous","F44V N157Y",2
"lib1","SARS-CoV-2","AAACATTTTCTACAAA",2,8.19,7.14,-3.63,0.35,2.76,1.08,0.01,">1 nonsynonymous","F99L P133S P161H",3
"lib1","SARS-CoV-2","AAACCAAAAACTAGAT",3,55.98,6,-4.76,1.38,1.89,1.11,0,">1 nonsynonymous","T46A R127G Y175G",3
"lib1","SARS-CoV-2","AAACCAAAATACAATG",4,42.49,10.41,-0.35,0.05,2.9,1,0,"1 nonsynonymous","S69M",1
"lib1","SARS-CoV-2","AAACCAAAATAGATTG",2,24.51,8.58,-2.18,0.34,1.5,1.12,0.04,">1 nonsynonymous","S43R L95A",2
"lib1","SARS-CoV-2","AAACCAAAATTGATAC",4,52.47,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","K56D A89P L95H R124T D137V",5
"lib1","SARS-CoV-2","AAACCAAAGTGTCCTG",4,74.05,8.03,-2.73,0.14,2.08,1.1,0.01,">1 nonsynonymous","N58L N171D",2
"lib1","SARS-CoV-2","AAACCAAATAACTTAG",2,9.39,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1W D68S R78L E141D",4
"lib1","SARS-CoV-2","AAACCAAATAATGTTT",2,23.61,8.22,-2.54,0.28,1.5,1.22,0.03,">1 nonsynonymous","F12K D90R",2
"lib1","SARS-CoV-2","AAACCAAATATAGACA",1,27.08,10.18,-0.59,0.12,2.28,1.07,0.01,">1 nonsynonymous","P7L N13R",2
"lib1","SARS-CoV-2","AAACCAAATTCATAAC",6,21.4,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","I104F V182Y",2
"lib1","SARS-CoV-2","AAACCAACAAAATAAA",3,33.71,10.56,-0.21,0.05,2.88,1.03,0,"1 nonsynonymous","D98M",1
"lib1","SARS-CoV-2","AAACCAACAGCCAGAT",5,91.1,10.22,-0.55,0.08,2.79,1.03,0,">1 nonsynonymous","D98L N107P",2
"lib1","SARS-CoV-2","AAACCAACCAGAAATG",1,4.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60W",1
"lib1","SARS-CoV-2","AAACCAACCCAATTAG",7,130.63,10.64,-0.12,0.04,2.94,1,0,"1 nonsynonymous","V173G",1
"lib1","SARS-CoV-2","AAACCAACGTAAAAAA",2,20.22,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","F12I A33K F160N R179L",4
"lib1","SARS-CoV-2","AAACCAACTAACTTGA",3,15.5,8.33,-2.43,0.34,1.5,1,0.07,">1 nonsynonymous","L60K I72S F134Y",3
"lib1","SARS-CoV-2","AAACCAACTCAAAATT",4,34.97,10.71,-0.06,0.09,2.88,1.01,0,"1 nonsynonymous","V37D",1
"lib1","SARS-CoV-2","AAACCAAGAAGTTCCT",5,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R S36V S41I V153N Y159I Y178N P197W",7
"lib1","SARS-CoV-2","AAACCAAGAGTGCACT",8,120.61,8.29,-2.47,0.13,2.05,1.1,0.01,">1 nonsynonymous","L95V G146V K198L",3
"lib1","SARS-CoV-2","AAACCAAGCATGTCGC",6,51.67,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R25K Y93G C150S",3
"lib1","SARS-CoV-2","AAACCAAGCGAAAAAT",2,86.7,10.58,-0.19,0.06,2.84,1.12,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AAACCAAGCTTCTGGC",1,3.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AAACCAAGTACAATAC",2,76.24,10.31,-0.46,0.05,2.87,1,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","AAACCAAGTAGTAGTC",2,6.3,6.07,-4.69,1.44,3,1.04,0,">1 nonsynonymous","C49Y Y143R N171L",3
"lib1","SARS-CoV-2","AAACCAATAAAAGTCT",1,85.24,10.69,-0.07,0.05,2.93,1.04,0,">1 nonsynonymous","S36E F160I V173I L187K",4
"lib1","SARS-CoV-2","AAACCAATACTGAGGA",2,5.66,6,-4.76,2,3,1.03,0,">1 nonsynonymous","V103S K132N G166V",3
"lib1","SARS-CoV-2","AAACCAATATAATTAT",2,13.91,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S29G D98S N107S D112P",4
"lib1","SARS-CoV-2","AAACCAATATAATTCA",7,95.89,9.4,-1.37,0.08,2.77,1.09,0,">1 nonsynonymous","N107S F156M",2
"lib1","SARS-CoV-2","AAACCAATATCATAAA",2,93.87,10.61,-0.16,0.06,2.86,1.06,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","AAACCAATATGCTAAT",6,185.12,9.56,-1.2,0.11,2.3,1.11,0,">1 nonsynonymous","F47Y K56L G155A V173W A190E",5
"lib1","SARS-CoV-2","AAACCAATCCTGGCAA",2,23.76,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","Y91T E141S G155C",3
"lib1","SARS-CoV-2","AAACCAATGCGGACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V I80G P96Y",3
"lib1","SARS-CoV-2","AAACCAATGTAATTAT",5,0,NA,NA,NA,NA,NA,NA,"stop","N40P I142*",2
"lib1","SARS-CoV-2","AAACCAATTAACTCCT",2,66.59,10.5,-0.26,0.05,2.98,1.01,0,"1 nonsynonymous","F44D",1
"lib1","SARS-CoV-2","AAACCAATTTATAAAA",2,12.71,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","R127F",1
"lib1","SARS-CoV-2","AAACCACAAAATTCAG",2,32.51,10.68,-0.08,0.13,2.9,1.04,0.02,">1 nonsynonymous","D59G K128G",2
"lib1","SARS-CoV-2","AAACCACAACATGGAT",4,15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I104D P161N",2
"lib1","SARS-CoV-2","AAACCACACACAACCA",2,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103Q L111P",2
"lib1","SARS-CoV-2","AAACCACACAGTTGAC",12,85.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T55Q A67P T100M L187E",4
"lib1","SARS-CoV-2","AAACCACAGTCTCTAG",1,11.12,9.71,-1.06,0.29,1.6,1.09,0.05,">1 nonsynonymous","L60K Y123I T140M",3
"lib1","SARS-CoV-2","AAACCACCAAATCAAC",2,17.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68E L95Q W106V",3
"lib1","SARS-CoV-2","AAACCACCATACAATA",4,1.87,NA,NA,NA,NA,NA,NA,"stop","N1P R27V S36G F62G I72* P197Q",6
"lib1","SARS-CoV-2","AAACCACCCCATCGAT",1,20.23,10.54,-0.22,0.05,2.95,1.03,0,"1 nonsynonymous","N13H",1
"lib1","SARS-CoV-2","AAACCACCCTCGTCCA",1,75.24,8.38,-2.39,0.16,1.91,1.14,0.01,">1 nonsynonymous","T46H Q176Y",2
"lib1","SARS-CoV-2","AAACCACCGATAAGAA",7,92.52,6.01,-4.75,0.75,1.5,1.2,0.01,">1 nonsynonymous","T15C Y159R",2
"lib1","SARS-CoV-2","AAACCACCGCAAAGCA",4,42.49,10.65,-0.11,0.08,2.89,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACCACCGCGAAGCG",1,5.93,8.92,-1.85,0.51,1.5,1,0.07,">1 nonsynonymous","F62L W106S F134R",3
"lib1","SARS-CoV-2","AAACCACCGTTGAATA",3,18.4,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","S41A F47S D90Q D98K L183G",5
"lib1","SARS-CoV-2","AAACCACCTAATCATA",18,101.51,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","A14F F62V Y91E V103W S139L",5
"lib1","SARS-CoV-2","AAACCACGAAAATTAA",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A G172H Y178C",3
"lib1","SARS-CoV-2","AAACCACGACTTTTAA",5,65.2,10.5,-0.27,0.05,2.88,1.11,0,">1 nonsynonymous","C61R D97L L183I",3
"lib1","SARS-CoV-2","AAACCACGCTACACTA",1,46.04,10.63,-0.14,0.07,2.87,1.06,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","AAACCACGTACCACCA",8,136.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A105S Y121G P177Q H189L",4
"lib1","SARS-CoV-2","AAACCACTATTAACTA",3,64.04,10.65,-0.11,0.05,2.93,1.02,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","AAACCACTCACAGAAC",4,131.7,10.75,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCACTCATATAAT",3,89.04,10.66,-0.1,0.06,2.84,1.1,0,"1 nonsynonymous","V115M",1
"lib1","SARS-CoV-2","AAACCACTGATAGGTT",3,33.69,9.22,-1.54,0.15,2.54,1.15,0.01,">1 nonsynonymous","L122G A145T E154C",3
"lib1","SARS-CoV-2","AAACCACTGGGCTATG",1,12.39,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","L38R L95F A105S",3
"lib1","SARS-CoV-2","AAACCAGAACGGTTAA",3,85.69,10.29,-0.48,0.08,2.75,1,0,">1 nonsynonymous","L5H A33I F47T",3
"lib1","SARS-CoV-2","AAACCAGACATATTTG",3,17.48,10.06,-0.7,0.12,2.63,1,0.01,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","AAACCAGAGGCATATG",2,17.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K F134D E141S N171K",4
"lib1","SARS-CoV-2","AAACCAGATTAGAACA",6,23.25,8.78,-1.99,0.28,1.5,1.05,0.04,">1 nonsynonymous","A33K L131T",2
"lib1","SARS-CoV-2","AAACCAGATTCTATAA",6,122.42,10.47,-0.3,0.04,2.92,1.02,0,">1 nonsynonymous","C61Y P149V",2
"lib1","SARS-CoV-2","AAACCAGCATACTTAC",2,15.3,10.76,-0.01,0.09,2.97,1.03,0,">1 nonsynonymous","K114Q I138Q",2
"lib1","SARS-CoV-2","AAACCAGCATAGTGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","C49R K94* G116Y C150K R179I",5
"lib1","SARS-CoV-2","AAACCAGCTTCCGCGC",2,33.55,10.35,-0.41,0.19,2.68,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACCAGGAGTCGAAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F44T T100I R127C Q144N R179S T201*",6
"lib1","SARS-CoV-2","AAACCAGTAATCGATG",15,250.14,10.08,-0.68,0.07,2.53,1.03,0,">1 nonsynonymous","S41E R136Y",2
"lib1","SARS-CoV-2","AAACCAGTATCTGGCA",3,68.74,10.85,0.09,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCAGTATTTTGGT",2,9.95,9.07,-1.7,0.2,1.81,1.3,0.02,">1 nonsynonymous","G9M T63W S129L",3
"lib1","SARS-CoV-2","AAACCAGTCAATAAAA",7,58.29,6.12,-4.65,0.8,1.5,1.18,0.02,">1 nonsynonymous","T100S K114D K128Y F167Y",4
"lib1","SARS-CoV-2","AAACCAGTCACACTCT",1,7.06,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","S41Y N92I K114T",3
"lib1","SARS-CoV-2","AAACCAGTTAACAAAA",4,35.44,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K56N L95F N120V Y143I",4
"lib1","SARS-CoV-2","AAACCAGTTGAAAAAT",1,7.24,8.74,-2.02,0.4,2.04,1.1,0.04,">1 nonsynonymous","C6D D112E",2
"lib1","SARS-CoV-2","AAACCAGTTGGGCAGG",12,94.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3L G86I D90M T100F F167R",5
"lib1","SARS-CoV-2","AAACCATAACTCATCG",1,20.06,6.43,-4.33,0.46,1.5,1.07,0.03,">1 nonsynonymous","I142T C150L",2
"lib1","SARS-CoV-2","AAACCATAATACACCT",4,30.01,10.41,-0.36,0.05,2.91,1.01,0,">1 nonsynonymous","Y35S L122Q S129K V180I",4
"lib1","SARS-CoV-2","AAACCATACAAGCCAA",7,34.21,10.32,-0.44,0.07,2.69,1.08,0,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","AAACCATACATTCTGA",4,44.77,10.47,-0.3,0.05,2.9,1.03,0,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","AAACCATACGACGCCA",1,2.41,NA,NA,NA,NA,NA,NA,"stop","K87* K128M",2
"lib1","SARS-CoV-2","AAACCATACGATAGAG",2,9.8,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","R25V I72S",2
"lib1","SARS-CoV-2","AAACCATAGAAGGGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* S43K",2
"lib1","SARS-CoV-2","AAACCATATCAATAAC",1,7.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S43F Y119M Y143A",3
"lib1","SARS-CoV-2","AAACCATATTGCAACG",8,35.95,8.65,-2.11,0.21,1.6,1.11,0.02,">1 nonsynonymous","S45P T63H G116V N171I",4
"lib1","SARS-CoV-2","AAACCATCACAATCAG",2,89.64,10.64,-0.12,0.08,2.88,1.08,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","AAACCATGGTATGTTC",2,0.96,NA,NA,NA,NA,NA,NA,"stop","F44H C61A D112Q Y123* P149V",5
"lib1","SARS-CoV-2","AAACCATGTAATTCCT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","T3H L60* P161I",3
"lib1","SARS-CoV-2","AAACCATGTCCAATCA",5,59.31,10.77,0,0.1,2.76,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCATTACAAAAAA",4,35.09,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G116R F167A",2
"lib1","SARS-CoV-2","AAACCATTACTTGAAA",1,7.22,10.69,-0.07,0.12,3,1,0,">1 nonsynonymous","R78V G146S",2
"lib1","SARS-CoV-2","AAACCATTCGGTCTTC",3,24.75,10.24,-0.53,0.07,2.93,1,0,">1 nonsynonymous","S45A T55D T63G G155S",4
"lib1","SARS-CoV-2","AAACCATTTCAGTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T E135D",2
"lib1","SARS-CoV-2","AAACCATTTTGTAGAG",4,100.89,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","N4K N130I I138R G146M P149S V181Y",6
"lib1","SARS-CoV-2","AAACCCAACATAAATA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","F8M N58K S69*",3
"lib1","SARS-CoV-2","AAACCCAACTCACACT",3,49.71,10.34,-0.42,0.11,2.79,1,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","AAACCCAACTCCTAAT",3,18.98,10.73,-0.04,0.1,2.91,1.06,0,">1 nonsynonymous","P7L V37F K56E",3
"lib1","SARS-CoV-2","AAACCCAAGATAACCC",3,12,10.24,-0.52,0.17,2.85,1,0.04,">1 nonsynonymous","G9R S43C C61A P149T",4
"lib1","SARS-CoV-2","AAACCCAAGCGCTACT",5,123.7,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V103L Y178K",2
"lib1","SARS-CoV-2","AAACCCAATAATCGGA",2,81.44,10.71,-0.05,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCCAATCCGGGAC",3,66.84,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","W23K Y123R I142K T193I",4
"lib1","SARS-CoV-2","AAACCCACCGTGAGTG",1,15.96,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A89M K94Q I142Y G172Q",4
"lib1","SARS-CoV-2","AAACCCACGAAACCGT",5,0.96,NA,NA,NA,NA,NA,NA,"stop","P54H E135*",2
"lib1","SARS-CoV-2","AAACCCAGCGAATACC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","T63* F99I",2
"lib1","SARS-CoV-2","AAACCCAGCGTCACAC",8,74.08,9.78,-0.98,0.11,1.76,1.13,0,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","AAACCCAGTCTAGTGT",7,680.12,10.81,0.05,0.06,2.93,1.05,0,">1 nonsynonymous","I2L T85H",2
"lib1","SARS-CoV-2","AAACCCATCAAACGCA",12,185.13,10.8,0.03,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCCATCCGTGATA",1,27.62,9.97,-0.79,0.1,2,1,0,">1 nonsynonymous","E10A A81R L131V S184N",4
"lib1","SARS-CoV-2","AAACCCATTTATTCAG",2,12.26,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","S29K S69W R73A D90F",4
"lib1","SARS-CoV-2","AAACCCATTTGGTTAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y R27P P82C S147Y Y159R",5
"lib1","SARS-CoV-2","AAACCCCAACTAGAAA",5,65.39,10.72,-0.05,0.07,2.9,1.03,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","AAACCCCACAGATACT",1,15.01,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D59S S139L P161M",3
"lib1","SARS-CoV-2","AAACCCCAGCTGTCAG",9,69.77,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10R Y50C Q84L K114L C195N",5
"lib1","SARS-CoV-2","AAACCCCAGTATTGAT",5,59.3,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R16K A89N P161T G166R P197L",5
"lib1","SARS-CoV-2","AAACCCCAGTTAAGAG",6,254,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25I S45T I72T P197K",4
"lib1","SARS-CoV-2","AAACCCCCAGAATTCC",3,66.28,10.64,-0.12,0.04,2.92,1,0,">1 nonsynonymous","S29G A33S",2
"lib1","SARS-CoV-2","AAACCCCCATTTGTTA",5,58.32,10.71,-0.05,0.05,2.88,1.04,0,"1 nonsynonymous","N64I",1
"lib1","SARS-CoV-2","AAACCCCCGACTTCAA",2,11.75,6.19,-4.57,0.6,1.5,1.06,0.01,">1 nonsynonymous","F44I G83A W106C F156L",4
"lib1","SARS-CoV-2","AAACCCCCGAGTCTGA",11,4.14,NA,NA,NA,NA,NA,NA,"stop","F12S G51R G172*",3
"lib1","SARS-CoV-2","AAACCCCCTTATATCT",13,207.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25V A89I Y121C E135Q S147H",5
"lib1","SARS-CoV-2","AAACCCCCTTATTGTG",1,5.41,10.52,-0.24,0.08,2.86,1.12,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","AAACCCCGGGTACATG",1,36.37,9.98,-0.79,0.08,2.64,1.02,0,"1 nonsynonymous","Y121W",1
"lib1","SARS-CoV-2","AAACCCCGTGAAAAAG",3,13.34,6,-4.76,1.56,3,1.21,0.01,">1 nonsynonymous","I88R L95F R136L N157F",4
"lib1","SARS-CoV-2","AAACCCCTAAAGCGGC",1,51.08,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V32S C61R F99N K114E Y121L Y178L",6
"lib1","SARS-CoV-2","AAACCCCTCAAACCAG",2,39.69,8.69,-2.08,0.1,2.46,1.07,0,">1 nonsynonymous","R73T E141S P169N P197S",4
"lib1","SARS-CoV-2","AAACCCCTGACAAAGC",7,46.96,10.45,-0.32,0.06,2.98,1,0,">1 nonsynonymous","L57R L122Q P149A",3
"lib1","SARS-CoV-2","AAACCCCTGATAATTT",1,14.09,11.03,0.26,0.13,2.91,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACCCCTTACCGCTA",7,11.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14I C61T Q84F P96R F99S T170Y",6
"lib1","SARS-CoV-2","AAACCCGAAATATTGG",7,119.67,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N40G V77S E141K S147Y",4
"lib1","SARS-CoV-2","AAACCCGACACTAGAG",11,113.39,10.75,-0.01,0.05,2.91,1.04,0,">1 nonsynonymous","F62L L122G G196L",3
"lib1","SARS-CoV-2","AAACCCGAGACGGCCG",2,52.16,6,-4.76,0.51,1.59,1.09,0.01,">1 nonsynonymous","L5A A14S D68E G86S",4
"lib1","SARS-CoV-2","AAACCCGATGGACCCT",7,17.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A18S C49Q D137I L188K",4
"lib1","SARS-CoV-2","AAACCCGCCACCACGA",9,167.69,10.49,-0.27,0.03,2.91,1.03,0,">1 nonsynonymous","S41I K87R",2
"lib1","SARS-CoV-2","AAACCCGCGCACGAGT",4,43.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V K56A T85S L131D",4
"lib1","SARS-CoV-2","AAACCCGCTTGACCAA",1,17.48,6,-4.76,2,1.5,1.23,0.07,"1 nonsynonymous","R124V",1
"lib1","SARS-CoV-2","AAACCCGGGAGAGATG",1,16.48,10.72,-0.04,0.12,2.94,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACCCGTCAAGAAGT",2,23.12,9.92,-0.84,0.13,2,1.05,0,">1 nonsynonymous","A14P S45D N64P",3
"lib1","SARS-CoV-2","AAACCCGTGAATAATT",5,0.03,NA,NA,NA,NA,NA,NA,"stop","G155D L162*",2
"lib1","SARS-CoV-2","AAACCCTAATCCCCTC",9,61.15,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P82Y N118P N130I T201H",4
"lib1","SARS-CoV-2","AAACCCTCACCCGTTA",1,52.13,9.96,-0.81,0.04,2.82,1.04,0,">1 nonsynonymous","N118R T201L",2
"lib1","SARS-CoV-2","AAACCCTCCCGCATAA",1,24.01,10.79,0.03,0.07,2.89,1.08,0,"1 nonsynonymous","L122H",1
"lib1","SARS-CoV-2","AAACCCTCTAATACGG",6,32.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8C F44M L57N P197N",4
"lib1","SARS-CoV-2","AAACCCTGAGAAAACC",8,142.69,9.93,-0.83,0.09,2.24,1.1,0,">1 nonsynonymous","Q84H D90V",2
"lib1","SARS-CoV-2","AAACCCTGTCCCCTTG",4,49.17,8.08,-2.68,0.15,2.73,1.07,0.01,">1 nonsynonymous","I2V F8L V65T G166E T201M",5
"lib1","SARS-CoV-2","AAACCCTTAAACACCA",3,12.63,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S36R N58K F99D",3
"lib1","SARS-CoV-2","AAACCCTTGCCATGAA",22,360.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48S G86S S139V G166S Q176T",5
"lib1","SARS-CoV-2","AAACCCTTTGAGGACA",3,27.25,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N24W D34S K87T Y119S R127S S184P",6
"lib1","SARS-CoV-2","AAACCGAACTTACAGT",4,85.76,8.13,-2.64,0.15,1.69,1.12,0.01,">1 nonsynonymous","N30M S43L N64R S129T Q176S",5
"lib1","SARS-CoV-2","AAACCGAAGAAGGGTT",2,35.92,6.92,-3.84,0.42,1.5,1.13,0.03,">1 nonsynonymous","N107I E141S F156Y Y178S",4
"lib1","SARS-CoV-2","AAACCGAAGATCCCAG",4,7.5,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A18C G51D P82L A105S",4
"lib1","SARS-CoV-2","AAACCGAATGTGAATG",1,46.06,9.51,-1.26,0.08,2.74,1.13,0,">1 nonsynonymous","P54V Y119T T140Y",3
"lib1","SARS-CoV-2","AAACCGACACAGGGGA",4,36.38,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S19M C61R K94A P177S",4
"lib1","SARS-CoV-2","AAACCGACAGAATGAA",1,21.66,10.71,-0.05,0.07,2.93,1.03,0,">1 nonsynonymous","Y123F F156N",2
"lib1","SARS-CoV-2","AAACCGACTTGTTGCT",3,14.29,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I2S Y39L A81S T85S G101Q",5
"lib1","SARS-CoV-2","AAACCGACTTTAAGTT",1,3.41,NA,NA,NA,NA,NA,NA,"stop","G86V Y119*",2
"lib1","SARS-CoV-2","AAACCGAGAAAGTGTA",1,10.98,9.97,-0.8,0.19,2.13,1.03,0.02,"1 nonsynonymous","V181T",1
"lib1","SARS-CoV-2","AAACCGATGAGCACTG",7,39.61,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","K87D D98T S113Y C158S",4
"lib1","SARS-CoV-2","AAACCGATTAATAACA",7,84.69,9.67,-1.1,0.16,1.75,1.13,0.01,">1 nonsynonymous","S43Y Y50Q",2
"lib1","SARS-CoV-2","AAACCGATTCACGATA",5,144.71,10.81,0.04,0.06,2.89,1.07,0,">1 nonsynonymous","Y39T K198G",2
"lib1","SARS-CoV-2","AAACCGATTGAAATGC",2,18.05,8.36,-2.41,0.47,1.5,1.04,0.08,">1 nonsynonymous","A105D S147T T201K",3
"lib1","SARS-CoV-2","AAACCGATTGCTACGC",4,65.52,10.56,-0.21,0.05,2.83,1.06,0,"1 nonsynonymous","G152R",1
"lib1","SARS-CoV-2","AAACCGCAAATGAGAG",1,16.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F62H Y121V N130I F160D",4
"lib1","SARS-CoV-2","AAACCGCAAATGTAGC",3,7.95,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V11I N40T K87L N92T G116E V181F K198P",7
"lib1","SARS-CoV-2","AAACCGCAACGTACGT",2,21.88,9.96,-0.81,0.09,2.64,1.07,0,">1 nonsynonymous","V37R D98V Q144T",3
"lib1","SARS-CoV-2","AAACCGCAATCATATG",10,96.07,6,-4.76,1.22,1.93,1.14,0,">1 nonsynonymous","F44S W106R Y119D E154Y",4
"lib1","SARS-CoV-2","AAACCGCGGGAGAACT",2,16.6,10.76,0,0.09,2.94,1.01,0,">1 nonsynonymous","V115N F134W",2
"lib1","SARS-CoV-2","AAACCGCGTTAGAGGA",1,29.68,8.3,-2.46,0.15,2.41,1.09,0.01,">1 nonsynonymous","D90S D98N F160S G166E",4
"lib1","SARS-CoV-2","AAACCGGACACAAGAA",14,88.47,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","T46F D68T D90L D98A G174A",5
"lib1","SARS-CoV-2","AAACCGGAGAGAGACA",7,2.31,NA,NA,NA,NA,NA,NA,"stop","A42Y A105P G116*",3
"lib1","SARS-CoV-2","AAACCGGCGAACCTTT",3,63.08,10.67,-0.1,0.05,2.98,1,0,">1 nonsynonymous","C61L T201V",2
"lib1","SARS-CoV-2","AAACCGGCGCCTTAAG",10,13.88,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V103P G174M",2
"lib1","SARS-CoV-2","AAACCGGCTTATTTTT",2,55.81,10.57,-0.2,0.07,2.94,1,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","AAACCGGGAATCAGTC",1,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","AAACCGGGACGTTAAT",3,77.73,10.82,0.06,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCGGGCTGAAGAT",3,25.27,8.17,-2.59,0.27,1.5,1.03,0.05,">1 nonsynonymous","R25C T63E",2
"lib1","SARS-CoV-2","AAACCGGTGACCCTTG",8,89.17,6,-4.76,1.07,1.5,1.21,0.01,">1 nonsynonymous","N64S I72Y P133A",3
"lib1","SARS-CoV-2","AAACCGTAAAAACTGC",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76Y D90L S139F",3
"lib1","SARS-CoV-2","AAACCGTAAATCAGAG",3,21.68,10.79,0.03,0.11,2.81,1.08,0.01,">1 nonsynonymous","S45H S147T",2
"lib1","SARS-CoV-2","AAACCGTAAATCCACC",5,92.89,10.37,-0.4,0.05,2.86,1.02,0,">1 nonsynonymous","A42V S129L",2
"lib1","SARS-CoV-2","AAACCGTAACCCCTTA",9,232.17,10.58,-0.18,0.02,2.94,1.01,0,"1 nonsynonymous","S45K",1
"lib1","SARS-CoV-2","AAACCGTAATACTCCA",6,76.62,8.42,-2.35,0.2,1.5,1.17,0.02,">1 nonsynonymous","F99V N120S P149Q",3
"lib1","SARS-CoV-2","AAACCGTACCCATATG",3,17.99,9.89,-0.88,0.29,1.55,1.07,0.04,">1 nonsynonymous","A81Y I138S",2
"lib1","SARS-CoV-2","AAACCGTAGTCCGCGT",1,36.68,10.32,-0.45,0.05,2.92,1,0,">1 nonsynonymous","A42H F156V E186H",3
"lib1","SARS-CoV-2","AAACCGTATTAGAATA",3,11.1,10.11,-0.66,0.2,2.72,1.13,0.01,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","AAACCGTCAAACCTAG",4,35.61,8.66,-2.1,0.14,2.48,1.12,0.01,">1 nonsynonymous","A105V T170H",2
"lib1","SARS-CoV-2","AAACCGTTGTAAAGTC",5,68.61,9.84,-0.92,0.11,2.37,1.05,0,">1 nonsynonymous","N4Y N107R T201P",3
"lib1","SARS-CoV-2","AAACCGTTTAACAAGC",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I Y66S V153F P177W P197Q",5
"lib1","SARS-CoV-2","AAACCTAAACCATCAA",6,26.08,10.81,0.05,0.1,2.92,1,0,">1 nonsynonymous","N110A K198W",2
"lib1","SARS-CoV-2","AAACCTAAATTACAAT",1,51.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L38S L57M A89Y L122S",4
"lib1","SARS-CoV-2","AAACCTAACCACAAAT",1,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","AAACCTAATATAAAAC",4,24.32,10.74,-0.03,0.07,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACCTAATGAACCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","R16* A67S K94L R179V",4
"lib1","SARS-CoV-2","AAACCTACAGACCCTA",3,29.03,8.53,-2.23,0.16,1.73,1.15,0.02,"1 nonsynonymous","S19W",1
"lib1","SARS-CoV-2","AAACCTACAGCTTCTG",9,43.48,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S45I D90I C150Y",3
"lib1","SARS-CoV-2","AAACCTACCACAACTA",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P K56W Q84G V103L C158I",5
"lib1","SARS-CoV-2","AAACCTACCTAAAGGA",4,28.7,10,-0.76,0.11,1.91,1.05,0.01,">1 nonsynonymous","P7L N24Y A33V N151L",4
"lib1","SARS-CoV-2","AAACCTACTATTGTTT",7,2.15,NA,NA,NA,NA,NA,NA,"stop","P82G Y121*",2
"lib1","SARS-CoV-2","AAACCTACTCAACCAT",3,6.12,6.92,-3.85,0.29,2.64,1.01,0.01,">1 nonsynonymous","R25F A42S D59V I104Y",4
"lib1","SARS-CoV-2","AAACCTAGCAAGTGGC",3,0.61,NA,NA,NA,NA,NA,NA,"stop","L5Q N13K I28S E135*",4
"lib1","SARS-CoV-2","AAACCTAGCACACGGA",1,11.73,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","S19Q G146E P149L",3
"lib1","SARS-CoV-2","AAACCTAGGTTAACAT",6,53.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8A F47N S108C L122P K128C C150E",6
"lib1","SARS-CoV-2","AAACCTAGTTAATCCT",2,33.61,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R25Y D90A N107V Y119S S139H G152L R179K",7
"lib1","SARS-CoV-2","AAACCTATAACAGACG",3,18.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D Y35L V52K Y123V",4
"lib1","SARS-CoV-2","AAACCTATAATCAGAG",7,113.69,10.71,-0.05,0.07,2.88,1.08,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","AAACCTATACACAAGT",2,28.32,10.93,0.17,0.06,2.94,1.02,0,">1 nonsynonymous","T63S K128E",2
"lib1","SARS-CoV-2","AAACCTATACTCTGTC",5,170.97,9.3,-1.46,0.05,2.81,1.11,0,">1 nonsynonymous","N24R G166C",2
"lib1","SARS-CoV-2","AAACCTATATTAATGT",1,16.39,10.76,0,0.1,2.96,1.02,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","AAACCTATCAAATAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* G83I N107S I142N",4
"lib1","SARS-CoV-2","AAACCTATCAGTACAC",1,24.17,6.22,-4.54,0.16,2.05,1.08,0,">1 nonsynonymous","F17S R27E D112M T170K",4
"lib1","SARS-CoV-2","AAACCTATCGAATACC",6,0.88,NA,NA,NA,NA,NA,NA,"stop","C31G G101* G152C",3
"lib1","SARS-CoV-2","AAACCTATTAGCTCAC",1,33.03,10.28,-0.48,0.11,2.79,1.01,0.01,">1 nonsynonymous","A89T T100H",2
"lib1","SARS-CoV-2","AAACCTCAACGAAAAA",4,57.37,10.82,0.06,0.06,2.96,1.01,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","AAACCTCAAGAAAATC",4,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32I L162K",2
"lib1","SARS-CoV-2","AAACCTCAATCTCCGG",5,46.8,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C31W S41L C61P A81T Y119R F126R",6
"lib1","SARS-CoV-2","AAACCTCCTTGACAAG",12,1.91,NA,NA,NA,NA,NA,NA,"stop","G9E F99* T170L",3
"lib1","SARS-CoV-2","AAACCTCGCTCCCCTA",14,231.71,10.79,0.03,0.05,2.93,1.03,0,"1 nonsynonymous","I2G",1
"lib1","SARS-CoV-2","AAACCTCTAATCAATG",4,19.24,7.89,-2.87,0.16,1.71,1.09,0.01,">1 nonsynonymous","N13L C31V N40E T100R F156Y",5
"lib1","SARS-CoV-2","AAACCTCTAGATCTAA",7,2.22,NA,NA,NA,NA,NA,NA,"stop","L95T G174* S200N",3
"lib1","SARS-CoV-2","AAACCTCTCTTGATTT",1,33.77,10.13,-0.63,0.04,2.91,1,0,">1 nonsynonymous","N64D K87S A105S",3
"lib1","SARS-CoV-2","AAACCTCTGCATTCTA",6,15.09,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","P161T V182N",2
"lib1","SARS-CoV-2","AAACCTCTTTAATTAC",4,40.76,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4R V11K G166P",3
"lib1","SARS-CoV-2","AAACCTGAACCCCACT",3,17.8,10.14,-0.63,0.1,2.81,1.11,0,">1 nonsynonymous","L5W G166S",2
"lib1","SARS-CoV-2","AAACCTGACGAACAAT",1,11.9,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","R127E",1
"lib1","SARS-CoV-2","AAACCTGACGGATTGT",1,86.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14P D68L N157Q",3
"lib1","SARS-CoV-2","AAACCTGACGTTATGG",3,114.72,10.6,-0.16,0.1,2.9,1.06,0,">1 nonsynonymous","F44Y F160D",2
"lib1","SARS-CoV-2","AAACCTGAGACATACA",13,129.05,7.47,-3.29,0.23,1.5,1.12,0.02,">1 nonsynonymous","L60K S139P",2
"lib1","SARS-CoV-2","AAACCTGAGTACCTAA",1,6.95,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V37S I72K Y91V Y143G V153N G166L G174Y",7
"lib1","SARS-CoV-2","AAACCTGATGCCAGCA",1,40.92,10.77,0.01,0.06,2.94,1.03,0,"1 nonsynonymous","S45D",1
"lib1","SARS-CoV-2","AAACCTGATTCATGAC",4,71.82,10.65,-0.11,0.04,2.9,1.07,0,">1 nonsynonymous","I2H I104V",2
"lib1","SARS-CoV-2","AAACCTGCATATCGAT",2,41.86,9.48,-1.29,0.14,1.67,1.14,0.01,">1 nonsynonymous","A89H F134N",2
"lib1","SARS-CoV-2","AAACCTGCGATGATAC",3,18,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F8L L38D N64D A81T S113Y E141W P149I",7
"lib1","SARS-CoV-2","AAACCTGCGGCTGAGA",1,475.61,6,-4.76,1.66,1.5,1.25,0.02,">1 nonsynonymous","W106N Y159S P177S",3
"lib1","SARS-CoV-2","AAACCTGCTCCACGAG",9,62.28,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G86R S139C G146K G152L P197G",5
"lib1","SARS-CoV-2","AAACCTGGAAATATAC",2,19.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A18R L95R Y165D",3
"lib1","SARS-CoV-2","AAACCTGGTGGGTGAT",2,54.54,10.53,-0.24,0.05,2.92,1,0,">1 nonsynonymous","A81M V173I",2
"lib1","SARS-CoV-2","AAACCTGTAAGAACGA",3,8.22,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R16C S45I L183T",3
"lib1","SARS-CoV-2","AAACCTGTAATCGTGA",1,36.1,10.65,-0.11,0.06,2.93,1.05,0,">1 nonsynonymous","S29R N120M",2
"lib1","SARS-CoV-2","AAACCTGTCCACTACC",1,5.95,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y35S W106E S139C",3
"lib1","SARS-CoV-2","AAACCTGTCTTAAGTG",1,29.37,8.52,-2.24,0.06,2.49,1.07,0,">1 nonsynonymous","S129V T140F T170V",3
"lib1","SARS-CoV-2","AAACCTGTGAAGTATA",2,25.67,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S36I Y50A",2
"lib1","SARS-CoV-2","AAACCTGTGAGGCACT",4,19.72,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6I Y50V",2
"lib1","SARS-CoV-2","AAACCTGTGGTGTTCG",5,27.93,10.85,0.09,0.11,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACCTTAGAGGGTTA",3,18.49,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","F8S D98Y N110K R124C C150A",5
"lib1","SARS-CoV-2","AAACCTTATATGTAAG",5,93.46,8.59,-2.18,0.16,1.65,1.13,0.01,">1 nonsynonymous","C31P R136Y",2
"lib1","SARS-CoV-2","AAACCTTATTTTAACA",9,127.43,10.66,-0.1,0.06,2.88,1.06,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","AAACCTTCAGATAAAA",7,69.39,6,-4.76,1.34,1.5,1.25,0.02,">1 nonsynonymous","A14W L38T T55C",3
"lib1","SARS-CoV-2","AAACCTTCGGAGGCCT",4,12.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y93R G174L V181D",3
"lib1","SARS-CoV-2","AAACCTTCGGTCGGCG",2,7.48,6.53,-4.23,1.21,3,1.01,0,">1 nonsynonymous","D68L N107L",2
"lib1","SARS-CoV-2","AAACCTTTGTTTCTCG",1,93.89,9.08,-1.68,0.06,2.81,1.09,0,">1 nonsynonymous","F44Y K56M I104L Y119V",4
"lib1","SARS-CoV-2","AAACGAAAATAAGAAT",4,32.2,8.84,-1.92,0.27,1.73,1.08,0.04,">1 nonsynonymous","C6V K87A Y119L",3
"lib1","SARS-CoV-2","AAACGAAAATCAACTG",2,64.11,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","I28L T63R N107W",3
"lib1","SARS-CoV-2","AAACGAAACCAGCGCT",12,331.29,9.44,-1.32,0.09,2.6,1.09,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","AAACGAAAGAAAAAGC",11,676.88,9.07,-1.69,0.06,2.81,1.11,0,">1 nonsynonymous","Y143Q V173L",2
"lib1","SARS-CoV-2","AAACGAAAGATATTCG",1,37.77,6,-4.76,1.29,3,1.2,0,">1 nonsynonymous","T3L R16G L38F Y66K G86M",5
"lib1","SARS-CoV-2","AAACGAAATACTCAGT",2,1.54,NA,NA,NA,NA,NA,NA,"stop","D59E Q84* K94G L122R G146R C158M N171S",7
"lib1","SARS-CoV-2","AAACGAAATATATACC",3,82.08,10.56,-0.21,0.03,2.96,1.02,0,">1 nonsynonymous","K56M F156P",2
"lib1","SARS-CoV-2","AAACGAAATATGACAA",2,5.43,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","V11H N64R G146V N157F",4
"lib1","SARS-CoV-2","AAACGAAATGGCTAAA",4,61.64,10.62,-0.14,0.04,2.89,1.06,0,">1 nonsynonymous","P7E N120S",2
"lib1","SARS-CoV-2","AAACGAACAGAATTTG",8,45.21,8.42,-2.34,0.12,1.78,1.11,0,">1 nonsynonymous","N4V N24R Y165L",3
"lib1","SARS-CoV-2","AAACGAACCAATATAC",6,29.31,6.05,-4.71,0.71,1.5,1.09,0.01,"1 nonsynonymous","Y93E",1
"lib1","SARS-CoV-2","AAACGAACGAAACTAT",5,66.84,10.74,-0.02,0.04,2.92,1.05,0,">1 nonsynonymous","P7N I28L V37I Y178T",4
"lib1","SARS-CoV-2","AAACGAACGCTGATTT",1,13.47,10.95,0.19,0.09,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGAAGACAAAAAA",4,18.13,10.72,-0.05,0.1,2.85,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACGAAGAGAAGGAA",1,7.36,7.63,-3.13,0.27,1.5,1,0.03,">1 nonsynonymous","S43P D68Q",2
"lib1","SARS-CoV-2","AAACGAAGTGCTTAGT",4,3.9,NA,NA,NA,NA,NA,NA,"stop","F8I W106*",2
"lib1","SARS-CoV-2","AAACGAAGTGGTATCG",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R S147K",2
"lib1","SARS-CoV-2","AAACGAATAACCCAAA",3,64.39,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63S P96K V103F",3
"lib1","SARS-CoV-2","AAACGAATACAGTACG",2,60.24,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G117V N151T Q176K S200F",4
"lib1","SARS-CoV-2","AAACGAATATTTCTGA",10,63.27,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V52Q N92K Y93W I142S",4
"lib1","SARS-CoV-2","AAACGAATCCTCATAC",1,71.07,10.6,-0.16,0.06,2.82,1.07,0,"1 nonsynonymous","I138P",1
"lib1","SARS-CoV-2","AAACGAATCTAAAGTC",1,55.44,10.75,-0.02,0.05,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGAATGTGCGATA",2,63.33,10.68,-0.08,0.04,2.93,1.01,0,"1 nonsynonymous","S139Q",1
"lib1","SARS-CoV-2","AAACGACAAAACGCAA",1,31.07,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P7L D112F I142W",3
"lib1","SARS-CoV-2","AAACGACAAGACAACG",1,1.49,NA,NA,NA,NA,NA,NA,"stop","S36A G51R F99L F156*",4
"lib1","SARS-CoV-2","AAACGACAAGACCTTA",1,205.77,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S45V P54T N64C V77L L162S",5
"lib1","SARS-CoV-2","AAACGACACGATTGTT",5,55.5,9.67,-1.1,0.32,1.5,1.05,0.04,">1 nonsynonymous","A89N E135T",2
"lib1","SARS-CoV-2","AAACGACAGAATACAC",3,53.96,10.51,-0.25,0.04,2.91,1.04,0,">1 nonsynonymous","S41L G51N V115R V173C P197A",5
"lib1","SARS-CoV-2","AAACGACAGGAAGTTG",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T N24S T148V P177M",4
"lib1","SARS-CoV-2","AAACGACATAATATAA",12,138.6,10.69,-0.07,0.03,2.92,1.04,0,">1 nonsynonymous","G9N Y121F",2
"lib1","SARS-CoV-2","AAACGACCAAACATTC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","Y50N L60Y A89R D112*",4
"lib1","SARS-CoV-2","AAACGACCAACCGACG",1,2.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","AAACGACCCACATGTC",1,7.33,9.76,-1,0.24,2.04,1.11,0.02,">1 nonsynonymous","N1K F12I G83A Y123H",4
"lib1","SARS-CoV-2","AAACGACCGACACAGT",2,28.4,6.12,-4.65,0.39,1.91,1.1,0,">1 nonsynonymous","C61Q Y165R E186V T201I",4
"lib1","SARS-CoV-2","AAACGACGACAAAAAA",1,13.06,9.26,-1.51,0.15,2.48,1.14,0.01,">1 nonsynonymous","F17I A33F G116F G196A",4
"lib1","SARS-CoV-2","AAACGACGATAAAAAA",6,143.44,9.9,-0.87,0.04,2.84,1.03,0,">1 nonsynonymous","C6F P149R",2
"lib1","SARS-CoV-2","AAACGACTGATATATA",3,22.25,9.71,-1.06,0.1,1.97,1.03,0.01,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","AAACGAGAAACCCAGC",3,25.99,10.52,-0.24,0.09,2.94,1.01,0,"1 nonsynonymous","I72C",1
"lib1","SARS-CoV-2","AAACGAGCCTAATAAC",3,14.31,9.71,-1.05,0.16,2.18,1.12,0.01,">1 nonsynonymous","Y50W D90S T100S G116A",4
"lib1","SARS-CoV-2","AAACGAGCTATAAAGA",1,6.17,6.63,-4.14,2,3,1.05,0,">1 nonsynonymous","L57P L162E P197A",3
"lib1","SARS-CoV-2","AAACGAGGAGCTATAC",5,115.12,9.19,-1.58,0.13,1.86,1.15,0.01,"1 nonsynonymous","I88A",1
"lib1","SARS-CoV-2","AAACGAGTAAAAAGCA",1,0.99,NA,NA,NA,NA,NA,NA,"stop","R25V A33F K48P Q163* T170S",5
"lib1","SARS-CoV-2","AAACGAGTAATCCTCT",1,12.17,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","L5P T46S G83V I88M P169T",5
"lib1","SARS-CoV-2","AAACGAGTTGAAGCGT",2,32.23,6.74,-4.02,0.62,1.5,1.08,0.07,">1 nonsynonymous","G83L D90I D97A R124V S139I",5
"lib1","SARS-CoV-2","AAACGATAAAGACAAT",7,86.5,10.68,-0.08,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGATAAAGCCAAT",6,51.5,7.19,-3.57,0.32,1.5,1.18,0.03,">1 nonsynonymous","G9S G83H L95M K128G R136H A145V",6
"lib1","SARS-CoV-2","AAACGATAAATTCCAC",1,57.61,10.71,-0.06,0.06,2.89,1.04,0,">1 nonsynonymous","N1M D97G",2
"lib1","SARS-CoV-2","AAACGATACAAACTAA",9,2.57,NA,NA,NA,NA,NA,NA,"stop","V52C T63* T85K D90A",4
"lib1","SARS-CoV-2","AAACGATACATTTCGG",4,77.28,10.47,-0.3,0.08,2.94,1.03,0,">1 nonsynonymous","A33V N64T G196S",3
"lib1","SARS-CoV-2","AAACGATATACTTCAA",5,55.23,10.73,-0.03,0.08,2.88,1.08,0,">1 nonsynonymous","N4H G83F",2
"lib1","SARS-CoV-2","AAACGATATTTACAAT",2,58.99,6,-4.76,1.86,1.5,1.15,0.02,">1 nonsynonymous","N30A R124H P149T",3
"lib1","SARS-CoV-2","AAACGATCAGTTATTT",3,42.3,10.65,-0.11,0.08,2.93,1.03,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","AAACGATCCACAAACC",10,295.52,10.25,-0.52,0.04,2.88,1.03,0,">1 nonsynonymous","R27V D90R S164G",3
"lib1","SARS-CoV-2","AAACGATCTGTAGGCA",3,7.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L T15D Y91N G146L",4
"lib1","SARS-CoV-2","AAACGATGAACATATG",11,173.37,10.56,-0.21,0.04,2.87,1.04,0,">1 nonsynonymous","A33F G51I F160Y",3
"lib1","SARS-CoV-2","AAACGATGAATAGCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","L95P D98* S129E",3
"lib1","SARS-CoV-2","AAACGATGACTTAAAC",1,16,10.58,-0.18,0.13,2.97,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACGATGATGTAGGT",6,197.52,10.71,-0.05,0.06,2.9,1.06,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","AAACGATTAGCAGCCG",5,36.84,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","Y93H C158V L187V",3
"lib1","SARS-CoV-2","AAACGATTGAAACTGA",1,86.45,9.08,-1.69,0.1,2.26,1.13,0,">1 nonsynonymous","E135R N151Q F156S",3
"lib1","SARS-CoV-2","AAACGATTTAATAACT",3,67.99,10.71,-0.05,0.06,2.87,1.07,0,">1 nonsynonymous","N120Q H189F T201R",3
"lib1","SARS-CoV-2","AAACGATTTGTCACCG",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K A18G N92D S113R G152I",5
"lib1","SARS-CoV-2","AAACGCAAAAAAAGGT",2,2.23,NA,NA,NA,NA,NA,NA,"stop","L5R C49V L57S D90N P96I N120*",6
"lib1","SARS-CoV-2","AAACGCAAAATTTCCG",4,36.82,10.58,-0.18,0.09,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGCAACTGAGAAA",2,43.91,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L5R I28P D90H",3
"lib1","SARS-CoV-2","AAACGCAAGCCAGTCT",1,9.86,10.65,-0.11,0.06,2.89,1.08,0,"1 nonsynonymous","E186S",1
"lib1","SARS-CoV-2","AAACGCAAGTTTCCTT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107H C150E",2
"lib1","SARS-CoV-2","AAACGCAATAACACCT",6,119.85,10.08,-0.68,0.04,2.75,1.04,0,">1 nonsynonymous","L5M Y35T T140L Q168A",4
"lib1","SARS-CoV-2","AAACGCACAAGCAAAA",2,42.24,10.77,0.01,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGCACCCCTGTCA",5,33.9,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T3I S29M F44Y C61V D90N S113M T148R",7
"lib1","SARS-CoV-2","AAACGCACGAAATAAA",5,157.25,10.73,-0.03,0.04,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGCAGGAAATTTA",3,74.49,10.63,-0.14,0.05,2.96,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","AAACGCAGGTCTCTCG",1,56.43,8.49,-2.27,0.04,2.79,1.03,0,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","AAACGCATCAAACATA",3,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167A T201K",2
"lib1","SARS-CoV-2","AAACGCATCGCCCGCG",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90E F99V A105K",3
"lib1","SARS-CoV-2","AAACGCATGATTCCAG",1,41.35,9.68,-1.09,0.13,2.35,1.06,0.01,">1 nonsynonymous","L60T G116N I138G",3
"lib1","SARS-CoV-2","AAACGCATGGTAATAA",1,45.66,10.27,-0.49,0.06,2.93,1.06,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","AAACGCATTACATATA",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G C31F S129V L183I",4
"lib1","SARS-CoV-2","AAACGCCACCACTATC",2,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E P96L N130R G174S",4
"lib1","SARS-CoV-2","AAACGCCACGGACTCC",4,60.77,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","AAACGCCAGCGAAGTA",5,84.14,10.67,-0.09,0.04,2.89,1.03,0,">1 nonsynonymous","D97S K114L K198S",3
"lib1","SARS-CoV-2","AAACGCCATCACGTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10A A89* N157S",3
"lib1","SARS-CoV-2","AAACGCCATGGCTGGC",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R C102F",2
"lib1","SARS-CoV-2","AAACGCCATTGCGCTG",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q D90A P149T G174W",4
"lib1","SARS-CoV-2","AAACGCCCCTGAAGGC",3,54.2,8.63,-2.14,0.13,2.17,1.08,0.01,">1 nonsynonymous","N110K Y119R R124K",3
"lib1","SARS-CoV-2","AAACGCCTAACGCCAT",1,19.22,6,-4.76,1.37,1.5,1.12,0.01,">1 nonsynonymous","K48F N64A G101E P133S S139D",5
"lib1","SARS-CoV-2","AAACGCCTAACGCGAC",8,90.47,10.71,-0.05,0.03,2.94,1.03,0,"1 nonsynonymous","C195L",1
"lib1","SARS-CoV-2","AAACGCCTATGGCTTT",5,11.69,6.88,-3.88,0.48,2.22,1.27,0.07,">1 nonsynonymous","W106L R127L",2
"lib1","SARS-CoV-2","AAACGCCTATTTACTG",3,117.57,9.85,-0.91,0.1,2.12,1.04,0,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","AAACGCCTCCCACTGC",4,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S D34F L95G",3
"lib1","SARS-CoV-2","AAACGCCTCCCCGATC",5,47.03,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F12R K94L N120L P149Q G155N",5
"lib1","SARS-CoV-2","AAACGCCTTTGTCACC",4,103.68,9.73,-1.04,0.07,2.08,1.06,0,">1 nonsynonymous","I2C N107G G152S",3
"lib1","SARS-CoV-2","AAACGCGAACCACAAG",6,71.48,10.8,0.03,0.08,2.85,1.1,0,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","AAACGCGATAAATTAG",5,32.05,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6T C31W F167G",3
"lib1","SARS-CoV-2","AAACGCGATAACCAGT",6,33.89,9.2,-1.57,0.25,1.5,1.05,0.04,">1 nonsynonymous","S29G P96V",2
"lib1","SARS-CoV-2","AAACGCGGACTGAACC",2,24.48,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P82K A89E Y119H",3
"lib1","SARS-CoV-2","AAACGCGGGTGCTATT",3,58.54,9.91,-0.86,0.11,2.47,1.04,0,">1 nonsynonymous","D90T G152M",2
"lib1","SARS-CoV-2","AAACGCGTGAACAGAC",8,25.3,8.36,-2.41,0.29,1.5,1,0.05,">1 nonsynonymous","A22L S69I D90R Y119F",4
"lib1","SARS-CoV-2","AAACGCTAGGGGATAG",1,37.99,10.81,0.05,0.13,2.81,1.07,0.01,"1 nonsynonymous","A22E",1
"lib1","SARS-CoV-2","AAACGCTCCTAACCGT",1,34.82,8.83,-1.93,0.29,1.5,1.09,0.03,">1 nonsynonymous","F12N Y91L",2
"lib1","SARS-CoV-2","AAACGCTGCCTCACAA",4,81.81,10.52,-0.25,0.05,2.9,1.03,0,">1 nonsynonymous","F44L V115I",2
"lib1","SARS-CoV-2","AAACGCTGTTAGTTAA",6,63.38,8.5,-2.26,0.25,1.5,1.04,0.02,">1 nonsynonymous","V77W F160W A192T",3
"lib1","SARS-CoV-2","AAACGCTTGTGTTTCA",1,2.35,NA,NA,NA,NA,NA,NA,"stop","T3P K56L D68* N110H N120M G152L",6
"lib1","SARS-CoV-2","AAACGGAACAAAAGTC",2,17.56,9.44,-1.33,0.3,1.55,1.01,0.04,">1 nonsynonymous","S41F Q84R N92H D112H S129D P197L",6
"lib1","SARS-CoV-2","AAACGGAACATAAACG",3,25.22,6.62,-4.14,0.47,1.5,1.16,0.03,">1 nonsynonymous","S41T V103L E141I",3
"lib1","SARS-CoV-2","AAACGGAACATGCAGT",2,13.33,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P7L A105Y E135T",3
"lib1","SARS-CoV-2","AAACGGAACGCTGAAA",1,65.94,8.32,-2.45,0.19,2.29,1.11,0.01,">1 nonsynonymous","Y39T Y175K",2
"lib1","SARS-CoV-2","AAACGGAACTTTACCT",2,52.07,6,-4.76,1.06,1.5,1.18,0.02,">1 nonsynonymous","I28N N92Y C158K",3
"lib1","SARS-CoV-2","AAACGGAATAGTGTTG",3,2.04,NA,NA,NA,NA,NA,NA,"stop","N30* F99Y P197*",3
"lib1","SARS-CoV-2","AAACGGAATATACGGC",3,20.25,10.3,-0.46,0.09,2.86,1.06,0,"1 nonsynonymous","N151P",1
"lib1","SARS-CoV-2","AAACGGACAACGCCAA",2,9.1,NA,NA,NA,NA,NA,NA,"stop","L5* G51N F126K",3
"lib1","SARS-CoV-2","AAACGGACAACTGTGT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S T46W N58R F167L",4
"lib1","SARS-CoV-2","AAACGGACAATAAGCT",13,54.03,6.28,-4.49,0.7,1.5,1.16,0.02,">1 nonsynonymous","G51V K94D A105P",3
"lib1","SARS-CoV-2","AAACGGACAATGAAGG",5,42.43,10.31,-0.45,0.17,2.71,1,0.02,">1 nonsynonymous","N58H N120Y K128N",3
"lib1","SARS-CoV-2","AAACGGACTTGCTTTG",1,27.76,10.68,-0.08,0.09,2.89,1.08,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","AAACGGAGAAAGCCAT",4,41.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D90S T100F Y121F C158S",4
"lib1","SARS-CoV-2","AAACGGAGCGCTAAAT",2,40.81,6.35,-4.41,0.68,1.5,1.18,0.04,">1 nonsynonymous","G101V N120W S139Y F167S",4
"lib1","SARS-CoV-2","AAACGGAGTAAACACA",10,6,10.4,-0.36,0.39,2.51,1,0.07,">1 nonsynonymous","Y35A N64T G101T",3
"lib1","SARS-CoV-2","AAACGGATAAAACATC",2,135.87,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A89Q Y121V S139F Q176I",4
"lib1","SARS-CoV-2","AAACGGATACGCATGT",2,32.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I88W A192L",2
"lib1","SARS-CoV-2","AAACGGATATTTTAAG",2,14.55,9.74,-1.02,0.21,1.63,1.1,0.02,">1 nonsynonymous","P96W E154P",2
"lib1","SARS-CoV-2","AAACGGATCAAGTGCC",5,106.58,10.72,-0.04,0.07,2.83,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACGGATCTTAAATC",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R N58L T100C L122S",4
"lib1","SARS-CoV-2","AAACGGATGAATTTCG",5,59.89,7.77,-3,0.24,1.5,1.13,0.02,">1 nonsynonymous","Y35T L162N",2
"lib1","SARS-CoV-2","AAACGGCAAATAGGTT",3,0.68,NA,NA,NA,NA,NA,NA,"stop","C6E L95* S164H",3
"lib1","SARS-CoV-2","AAACGGCCTGAAATAC",8,64.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K56N A105N R124S A190R",4
"lib1","SARS-CoV-2","AAACGGCGTCCCAACA",2,9.45,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I88R R127F T201V",3
"lib1","SARS-CoV-2","AAACGGCTCGATATAA",2,7.79,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P96S W106G",2
"lib1","SARS-CoV-2","AAACGGCTTACTATTC",3,8.28,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A22V P82S N171V",3
"lib1","SARS-CoV-2","AAACGGGAATAACTTT",2,49.43,6,-4.76,1.48,1.5,1.18,0.01,">1 nonsynonymous","A33P N40V G83T D90L",4
"lib1","SARS-CoV-2","AAACGGGCAATTGTGC",1,11.53,6.6,-4.17,0.85,3,1.12,0.01,">1 nonsynonymous","L57R L95S D112W Y119D",4
"lib1","SARS-CoV-2","AAACGGGGAATGTATA",5,55.33,9.24,-1.53,0.1,2.86,1.14,0,">1 nonsynonymous","C61Y G152N T170N",3
"lib1","SARS-CoV-2","AAACGGTAACAACGAG",7,179.76,8.5,-2.27,0.19,1.96,1.12,0.01,">1 nonsynonymous","F12L F44P Y119L",3
"lib1","SARS-CoV-2","AAACGGTAGACCTCCA",5,24.4,6.88,-3.88,0.47,1.5,1.05,0.04,">1 nonsynonymous","S19W C102N",2
"lib1","SARS-CoV-2","AAACGGTAGAGTGCCC",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K A33Q V71I Q168W T201G",5
"lib1","SARS-CoV-2","AAACGGTATGGAAATA",8,167.64,10.7,-0.06,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGGTCTAGAGCTT",6,105.62,10.11,-0.65,0.04,2.97,1,0,">1 nonsynonymous","R16T K87M G155T T201G",4
"lib1","SARS-CoV-2","AAACGGTGACACACAA",6,80.64,9.17,-1.6,0.15,1.59,1.14,0.01,">1 nonsynonymous","S69E E154K",2
"lib1","SARS-CoV-2","AAACGGTGACCGGTGG",1,95.35,9.71,-1.05,0.08,2.6,1.06,0,">1 nonsynonymous","Y121C T140S",2
"lib1","SARS-CoV-2","AAACGGTGGTTAATAT",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F A42V Y121A Q144Y",4
"lib1","SARS-CoV-2","AAACGTAAAAACTTTC",6,1.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","AAACGTAAAAATACAG",7,64.29,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F12I G101R I104N",3
"lib1","SARS-CoV-2","AAACGTAACCACGGCG",4,31.92,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R16W L95A N107D G116E",4
"lib1","SARS-CoV-2","AAACGTAACCGTTATG",2,21.82,6.62,-4.15,0.2,1.66,1.1,0.01,">1 nonsynonymous","W23V G86T D98H Q168L",4
"lib1","SARS-CoV-2","AAACGTAAGACCAATA",9,85.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60E W106L Q176K V180M",4
"lib1","SARS-CoV-2","AAACGTAAGCGTAGGA",6,47.17,9.94,-0.82,0.13,2.17,1.07,0.01,">1 nonsynonymous","G9R S43A T55P D98H S129F",5
"lib1","SARS-CoV-2","AAACGTAATGCCATGA",1,16.33,7.22,-3.55,0.39,1.5,1.29,0.05,">1 nonsynonymous","I2Y P7R V32R N40A T46P",5
"lib1","SARS-CoV-2","AAACGTAATTGTACAA",1,51.65,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36L S129G T148Y G172R",4
"lib1","SARS-CoV-2","AAACGTAATTTACATA",3,58,8.57,-2.2,0.17,1.5,1.13,0.01,">1 nonsynonymous","I72A G155N",2
"lib1","SARS-CoV-2","AAACGTACACCGCTGA",2,51.37,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4M N13I S19V Y35K P54S V103T",6
"lib1","SARS-CoV-2","AAACGTACGCATGAGT",7,170.3,10.8,0.04,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGTAGAGGTAATA",2,41.69,10.56,-0.2,0.07,2.92,1.01,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","AAACGTAGTGAGGCAA",1,9.58,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C102W K114Q S139I",3
"lib1","SARS-CoV-2","AAACGTATACAAATTA",1,7.33,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F12R A33S T55L Y119K F167L G172R",6
"lib1","SARS-CoV-2","AAACGTATATATAGTA",2,37.47,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","I2H K26L D97P S129D D137L T148P",6
"lib1","SARS-CoV-2","AAACGTATGATAACTA",15,79.71,6,-4.76,1.97,1.5,1.16,0.01,">1 nonsynonymous","D98R C158Y",2
"lib1","SARS-CoV-2","AAACGTCAGAACATTT",4,45.95,10.31,-0.45,0.06,2.87,1.06,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","AAACGTCCCTAACTAC",8,57.74,10.07,-0.69,0.1,2.31,1.05,0,">1 nonsynonymous","P7V T55G L131M",3
"lib1","SARS-CoV-2","AAACGTCCGTAACTAA",5,48.16,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I72G I80K",2
"lib1","SARS-CoV-2","AAACGTGACACTCAAT",5,37.67,10.07,-0.69,0.08,2.92,1,0,">1 nonsynonymous","N64C Y143L",2
"lib1","SARS-CoV-2","AAACGTGACTATCATA",2,12.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5W K94N F134D",3
"lib1","SARS-CoV-2","AAACGTGAGTTATAAA",6,63.2,6.39,-4.37,0.53,1.5,1.19,0.02,">1 nonsynonymous","A42S T63L W106N S139K",4
"lib1","SARS-CoV-2","AAACGTGCCAATATGA",2,9.01,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S41R G83K C102R K199G",4
"lib1","SARS-CoV-2","AAACGTGCGATCCTGG",1,14.32,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F126W P161F",2
"lib1","SARS-CoV-2","AAACGTGCTCATATGT",4,43.87,10.71,-0.06,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACGTGGACACAAAT",5,52.4,8.44,-2.33,0.26,1.5,1.09,0.03,">1 nonsynonymous","A89R G155A",2
"lib1","SARS-CoV-2","AAACGTGGGTCTCGAG",1,49.12,9.43,-1.33,0.1,2.12,1.08,0,">1 nonsynonymous","Y66V L122W Y165W",3
"lib1","SARS-CoV-2","AAACGTGTATTTTAAA",3,89.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105D N120R L125S G146P F160S Y178F",6
"lib1","SARS-CoV-2","AAACGTGTCTAAACCT",1,28.44,10.16,-0.6,0.03,2.97,1,0,">1 nonsynonymous","G83N G152V",2
"lib1","SARS-CoV-2","AAACGTTATTGCCATA",4,72.01,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I28S Y35R V103R",3
"lib1","SARS-CoV-2","AAACGTTCAATCGTTG",3,16.58,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G51S G101S",2
"lib1","SARS-CoV-2","AAACGTTCCTTAGCCA",1,55.99,10.77,0.01,0.05,2.95,1,0,">1 nonsynonymous","T3V Q168R",2
"lib1","SARS-CoV-2","AAACGTTCTAGACTAA",5,85.51,10.66,-0.1,0.05,2.91,1.06,0,">1 nonsynonymous","S129I T201K",2
"lib1","SARS-CoV-2","AAACGTTGAAAAACTA",3,30.07,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9N E135M G172L",3
"lib1","SARS-CoV-2","AAACGTTGACCATGTT",6,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C L57F K128F V180K",4
"lib1","SARS-CoV-2","AAACGTTGCACACCTA",2,32.08,9.36,-1.41,0.16,1.82,1.16,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","AAACGTTGCTTACTTC",7,39.72,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R16A F99T G174L",3
"lib1","SARS-CoV-2","AAACGTTTAGTTTCTG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","A105S L122* S129L T148V N151S Y159*",6
"lib1","SARS-CoV-2","AAACTAAAAATACACC",4,6.9,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T3W D90S G116N Y121L E141Y P149C G196A",7
"lib1","SARS-CoV-2","AAACTAAAAATATTTG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K A105P S129C",3
"lib1","SARS-CoV-2","AAACTAAAAATCCTTC",1,34.14,8.99,-1.78,0.1,1.87,1.16,0,">1 nonsynonymous","N1S G86S Q163R",3
"lib1","SARS-CoV-2","AAACTAAAAATTAAAG",1,15.88,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G51C L60T G83V D97R F126N",5
"lib1","SARS-CoV-2","AAACTAAAACCTCATA",3,14.35,6,-4.76,1.79,3,1.11,0,">1 nonsynonymous","V71R Q84R P169T V173Q",4
"lib1","SARS-CoV-2","AAACTAAAACCTGTAT",19,4.61,NA,NA,NA,NA,NA,NA,"stop","V37T G51* D59F",3
"lib1","SARS-CoV-2","AAACTAAAACTGAAGT",2,27.7,6.85,-3.92,0.14,1.85,1.06,0,">1 nonsynonymous","N58S D97W V103C S139I G166R",5
"lib1","SARS-CoV-2","AAACTAAAATTCCACT",1,34.99,10.89,0.13,0.1,2.92,1.04,0,"1 nonsynonymous","N110M",1
"lib1","SARS-CoV-2","AAACTAAAATTCCCGT",6,35.98,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","I88R F167K",2
"lib1","SARS-CoV-2","AAACTAAAATTGTTTT",5,71.76,10.69,-0.07,0.04,2.95,1.01,0,">1 nonsynonymous","I28L G196V",2
"lib1","SARS-CoV-2","AAACTAAAATTTAACT",4,49.87,10.31,-0.45,0.08,2.86,1.01,0,">1 nonsynonymous","N4L R27S",2
"lib1","SARS-CoV-2","AAACTAAACCCTGCAT",5,1.52,NA,NA,NA,NA,NA,NA,"stop","T15A K87* N120R K199S",4
"lib1","SARS-CoV-2","AAACTAAACGGAACAG",2,20.07,9.53,-1.23,0.21,1.98,1.06,0.02,">1 nonsynonymous","S45V N110R S129F",3
"lib1","SARS-CoV-2","AAACTAAAGACATGAT",1,23.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D68K G86Q L95S L122G P161L H189L",6
"lib1","SARS-CoV-2","AAACTAAAGAGCCATC",11,58.68,6.13,-4.63,0.71,1.5,1.22,0.01,">1 nonsynonymous","F17K N107L L162Y",3
"lib1","SARS-CoV-2","AAACTAAAGCAGCAAG",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100I L162Y",2
"lib1","SARS-CoV-2","AAACTAAAGTTCCCCT",6,76.4,10.62,-0.14,0.1,2.81,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTAAATAGAGAAA",2,44.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60I D68G",2
"lib1","SARS-CoV-2","AAACTAAATATTCAGC",1,21.55,10.87,0.11,0.08,2.95,1,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","AAACTAAATCAATGCG",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y V71K L122E Y175K L183I",5
"lib1","SARS-CoV-2","AAACTAAATCGCGCCG",3,68.59,10.78,0.01,0.05,2.89,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACTAAATGATTTGA",2,42.94,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","G9M P82E D90H W106D",4
"lib1","SARS-CoV-2","AAACTAACAACCAATA",5,20.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61Y V181D",2
"lib1","SARS-CoV-2","AAACTAACAGAATATA",2,13.9,10.86,0.1,0.16,2.83,1,0.01,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","AAACTAACCCCAATAC",2,81.39,10.76,0,0.06,2.93,1.03,0,">1 nonsynonymous","S53V N110L S147Q",3
"lib1","SARS-CoV-2","AAACTAACCTTCTATC",3,36.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q W106Y",2
"lib1","SARS-CoV-2","AAACTAACGACCCGCT",2,33.07,7.22,-3.54,0.24,1.5,1.08,0.02,">1 nonsynonymous","N107Q N120R S139Y",3
"lib1","SARS-CoV-2","AAACTAACTAAACAGG",1,83.82,10.16,-0.6,0.08,2.8,1.01,0,">1 nonsynonymous","L60P N130L",2
"lib1","SARS-CoV-2","AAACTAACTAACATCT",6,11.35,7.68,-3.08,0.46,1.5,1,0.07,">1 nonsynonymous","A33K Y119F P133L",3
"lib1","SARS-CoV-2","AAACTAAGACCTTATT",5,45.92,6.09,-4.68,0.98,1.5,1.29,0.04,">1 nonsynonymous","N13T S45V L60H N107H",4
"lib1","SARS-CoV-2","AAACTAAGAGAACACC",1,22.38,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F17S P82F Y143I",3
"lib1","SARS-CoV-2","AAACTAAGGAGTTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K26* S69W G83S D90C W106V",5
"lib1","SARS-CoV-2","AAACTAATAAAAGAGA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I L38T K56W G116L T201Q",5
"lib1","SARS-CoV-2","AAACTAATAAACCGGT",4,73.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K132P S139C Q176T",3
"lib1","SARS-CoV-2","AAACTAATAATAACGC",4,20.84,10.49,-0.28,0.07,2.98,1,0,">1 nonsynonymous","Y39S T85A",2
"lib1","SARS-CoV-2","AAACTAATAATTCAGA",2,12.12,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2P A33N S45I K87L N92G W106L",6
"lib1","SARS-CoV-2","AAACTAATATAGTGAT",7,122.23,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R25F G51C Y165S V173N",4
"lib1","SARS-CoV-2","AAACTAATATGAAACC",2,32.95,6,-4.76,1.5,1.5,1.1,0.01,">1 nonsynonymous","R27W L38S K87L Y119M",4
"lib1","SARS-CoV-2","AAACTAATCCCACGTT",1,14.76,6.21,-4.55,0.74,1.5,1.19,0.02,">1 nonsynonymous","F12N I72H",2
"lib1","SARS-CoV-2","AAACTACAACAAAGAT",6,66.01,10,-0.76,0.08,2.59,1.03,0,">1 nonsynonymous","A42V Y121N",2
"lib1","SARS-CoV-2","AAACTACACAAACCGG",5,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V F99W S113T G174T",4
"lib1","SARS-CoV-2","AAACTACACAACAGAA",3,44.48,10.41,-0.35,0.05,2.94,1,0,">1 nonsynonymous","A33P L60R",2
"lib1","SARS-CoV-2","AAACTACACCGCGGAC",6,3.04,NA,NA,NA,NA,NA,NA,"stop","G9L G86* P133L P177C H189Y",5
"lib1","SARS-CoV-2","AAACTACACGAAGTAA",1,7.34,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","V11I A42T L95E N107I",4
"lib1","SARS-CoV-2","AAACTACAGACCAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N120*",1
"lib1","SARS-CoV-2","AAACTACAGCACACGT",3,2.27,NA,NA,NA,NA,NA,NA,"stop","I2* E154I K198R",3
"lib1","SARS-CoV-2","AAACTACAGTACCTAC",3,63.27,8.76,-2.01,0.07,2.85,1.04,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","AAACTACAGTATTAAC",2,5.56,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F12D T15V K56P I138F",4
"lib1","SARS-CoV-2","AAACTACATAGCCGCG",2,0.48,NA,NA,NA,NA,NA,NA,"stop","L57* D112R K199Q",3
"lib1","SARS-CoV-2","AAACTACATAGTGCGC",10,151.39,10.05,-0.71,0.06,2.78,1.03,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","AAACTACCAAGATGGT",4,6.94,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12S W106E S184P",3
"lib1","SARS-CoV-2","AAACTACCACCAGACC",8,120.66,10.14,-0.62,0.05,2.8,1.03,0,"1 nonsynonymous","C6Y",1
"lib1","SARS-CoV-2","AAACTACCCTATATAA",10,179,10.64,-0.13,0.04,2.94,1.02,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","AAACTACCTCTTTACT",2,62.24,10.68,-0.09,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTACCTGAAGCAT",3,8.6,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C31A E135G G146D",3
"lib1","SARS-CoV-2","AAACTACCTTCATCAA",6,16.02,9.26,-1.51,0.14,2.07,1.08,0.01,">1 nonsynonymous","A14L S41W G116H T201W",4
"lib1","SARS-CoV-2","AAACTACGAGAGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36V T46* V71D S139K",4
"lib1","SARS-CoV-2","AAACTACGGTACATTG",8,54.08,6.17,-4.59,0.45,1.5,1.11,0.01,">1 nonsynonymous","C61K P82L C158H",3
"lib1","SARS-CoV-2","AAACTACGTGCCCACC",4,49.15,6,-4.76,1.56,1.5,1.15,0.02,">1 nonsynonymous","D68E G101S Y143L",3
"lib1","SARS-CoV-2","AAACTACTAAAAGAGA",4,57.98,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D68W S113D N120T",3
"lib1","SARS-CoV-2","AAACTACTAACGAATA",8,45.76,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S45C L95Q",2
"lib1","SARS-CoV-2","AAACTACTAACGACTT",8,106.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83S C150M",2
"lib1","SARS-CoV-2","AAACTACTACATCAAG",8,29.06,6,-4.76,2,3,1.12,0,"1 nonsynonymous","V180G",1
"lib1","SARS-CoV-2","AAACTACTCTAAAGGA",9,50.41,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7L I28D P149S C158K",4
"lib1","SARS-CoV-2","AAACTACTGAAAACAT",7,35.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3C C61L D98S Y178E",4
"lib1","SARS-CoV-2","AAACTAGAAACTGGGA",5,52.83,9.93,-0.83,0.15,2.37,1.01,0.01,">1 nonsynonymous","N4F F44A",2
"lib1","SARS-CoV-2","AAACTAGAAATATTTA",4,39.33,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9L K87A Y91D F99N",4
"lib1","SARS-CoV-2","AAACTAGAAATTACTG",5,33.73,7.04,-3.72,0.48,1.5,1.03,0.05,">1 nonsynonymous","S19P S113Q K128R G146N",4
"lib1","SARS-CoV-2","AAACTAGAACACACTT",4,39.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I K94F",2
"lib1","SARS-CoV-2","AAACTAGAACTATATG",1,27.52,10.27,-0.5,0.15,2.57,1.1,0.01,">1 nonsynonymous","D90H N120V S129A S147P T201N",5
"lib1","SARS-CoV-2","AAACTAGACGGTTGGG",2,5.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y N107G F185R",3
"lib1","SARS-CoV-2","AAACTAGACTGTGAAA",6,99.3,9.81,-0.95,0.07,2.61,1.02,0,">1 nonsynonymous","I88V S164L T201K",3
"lib1","SARS-CoV-2","AAACTAGAGCAATGAT",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L K198W",2
"lib1","SARS-CoV-2","AAACTAGAGCTCAATC",3,34.9,7.37,-3.4,0.46,1.5,1.11,0.07,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","AAACTAGCCGACCTTG",1,7.8,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","C49L P82L P149S V181G",4
"lib1","SARS-CoV-2","AAACTAGGACTTGAAC",1,23.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25C T55N L95I",3
"lib1","SARS-CoV-2","AAACTAGTATTGCAGG",6,34.34,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N4L E10K A14N D98Y S129A C150D",6
"lib1","SARS-CoV-2","AAACTAGTCCGGTTTG",4,68.19,10.16,-0.6,0.05,2.75,1.05,0,">1 nonsynonymous","T15K D59V L188P H189P",4
"lib1","SARS-CoV-2","AAACTAGTGACGACAA",1,9.65,9.93,-0.83,0.21,2.06,1.18,0.02,">1 nonsynonymous","Y35R D98G",2
"lib1","SARS-CoV-2","AAACTAGTGGAATAGT",5,37.35,10.8,0.04,0.05,2.89,1.07,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","AAACTAGTGTACAAAG",1,41.42,8.3,-2.46,0.17,3,1.07,0.01,"1 nonsynonymous","F126S",1
"lib1","SARS-CoV-2","AAACTAGTTTATATGG",4,56.12,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","P7M T100P F160R",3
"lib1","SARS-CoV-2","AAACTATAAATAGCAC",5,113.16,10.21,-0.55,0.03,2.86,1,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","AAACTATAATTTTCCT",5,9.82,10.66,-0.1,0.13,2.96,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACTATACAAAGCAT",1,4.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","AAACTATAGACGATTA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V V77L Y93S",3
"lib1","SARS-CoV-2","AAACTATAGCTGGAAT",2,20.32,6.76,-4,0.46,1.5,1.02,0.05,">1 nonsynonymous","S45P I80T W106V N120E",4
"lib1","SARS-CoV-2","AAACTATATCGCCATC",11,165.12,10.54,-0.23,0.05,2.84,1.04,0,">1 nonsynonymous","R78A S129T F160L",3
"lib1","SARS-CoV-2","AAACTATCAAGGTGAC",4,46.88,10.06,-0.7,0.06,2.78,1.02,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","AAACTATCACCCTCTC",3,1.3,NA,NA,NA,NA,NA,NA,"stop","C6* C61I G83M N92F S139D F167T P197S",7
"lib1","SARS-CoV-2","AAACTATCACTTGCAC",12,38,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R27M A81N A89C L111Y",4
"lib1","SARS-CoV-2","AAACTATCAGATCCAT",4,35.3,6.04,-4.72,1.25,1.5,1.27,0.03,">1 nonsynonymous","I2W L38C D98M P149R",4
"lib1","SARS-CoV-2","AAACTATCTCAACAAT",1,40.06,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2N T140L C158F",3
"lib1","SARS-CoV-2","AAACTATGGACCAGGG",1,0.68,NA,NA,NA,NA,NA,NA,"stop","G9Q W23T V32S S129G P197*",5
"lib1","SARS-CoV-2","AAACTATGGATGCACG",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50H A105D W106C T140N N151I",5
"lib1","SARS-CoV-2","AAACTATGTACTCAAT",9,50.55,10.05,-0.72,0.09,2.44,1,0,">1 nonsynonymous","P96R F134L",2
"lib1","SARS-CoV-2","AAACTATTACACTATA",3,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S D90T V103R P149W",4
"lib1","SARS-CoV-2","AAACTATTACGCATAG",1,15.06,10.51,-0.26,0.08,2.91,1.1,0,"1 nonsynonymous","D59M",1
"lib1","SARS-CoV-2","AAACTATTAGCACGAA",2,20.01,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2A D98A R124C F160N",4
"lib1","SARS-CoV-2","AAACTATTGACTAATG",7,97.25,10.62,-0.14,0.03,2.96,1.02,0,">1 nonsynonymous","N64F G174A",2
"lib1","SARS-CoV-2","AAACTATTTGAAATTC",3,1.29,NA,NA,NA,NA,NA,NA,"stop","P7T Y39V F47L G152* T201V",5
"lib1","SARS-CoV-2","AAACTATTTGGTCAAC",1,14.82,10.53,-0.23,0.04,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTATTTTATCACA",3,32.53,10.83,0.07,0.09,2.86,1.06,0,"1 nonsynonymous","F160A",1
"lib1","SARS-CoV-2","AAACTCAAAATCGGTT",19,259.97,10.75,-0.01,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTCAAATTACATC",3,85.79,10.75,-0.01,0.05,2.93,1.05,0,">1 nonsynonymous","K114T P169I",2
"lib1","SARS-CoV-2","AAACTCAAATTTATGC",1,14.23,10.21,-0.56,0.17,2.42,1,0.01,">1 nonsynonymous","N30M A81R",2
"lib1","SARS-CoV-2","AAACTCAACTTTGTAT",5,85.05,10.3,-0.47,0.05,2.83,1.01,0,">1 nonsynonymous","A18G I80V Y178F",3
"lib1","SARS-CoV-2","AAACTCAAGATACGAC",2,0.61,NA,NA,NA,NA,NA,NA,"stop","I80M K94* A105K R136L N151S",5
"lib1","SARS-CoV-2","AAACTCAAGCTTTAGC",1,21.85,7.15,-3.61,0.44,1.5,1.08,0.05,">1 nonsynonymous","E10Y S139W G155E T201G",4
"lib1","SARS-CoV-2","AAACTCACACAAACCT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L L95C K114H Q144V G174W L187M A190S",7
"lib1","SARS-CoV-2","AAACTCACCAAAATCG",7,147.39,6.09,-4.67,0.72,1.5,1.18,0.01,">1 nonsynonymous","V37M G146V Q163P",3
"lib1","SARS-CoV-2","AAACTCACCATAATTT",5,47,6,-4.76,1.2,1.5,1.17,0.01,">1 nonsynonymous","P7Y S19V S41Q K132P G172R",5
"lib1","SARS-CoV-2","AAACTCAGCAAATCTT",1,10.82,NA,NA,NA,NA,NA,NA,"stop","R73* K87L",2
"lib1","SARS-CoV-2","AAACTCATATGAAGCA",6,92.2,10.77,0.01,0.06,2.9,1.06,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","AAACTCATGACGGTGA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","C31A D90C W106S Y119H T140*",5
"lib1","SARS-CoV-2","AAACTCATGCACACCA",3,53.56,10.38,-0.38,0.12,2.61,1.08,0.01,">1 nonsynonymous","G83W K132L S164R",3
"lib1","SARS-CoV-2","AAACTCATTAGAATAG",4,60.52,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G101L R136S",2
"lib1","SARS-CoV-2","AAACTCCAAAGAACGT",2,11.27,NA,NA,NA,NA,NA,NA,"stop","K56M N64L D97V N107* G116W Y123H D137M",7
"lib1","SARS-CoV-2","AAACTCCAGACTCTCG",4,0.27,NA,NA,NA,NA,NA,NA,"stop","G9N Y39M Y93* F160R",4
"lib1","SARS-CoV-2","AAACTCCAGTTCAACT",7,1.12,NA,NA,NA,NA,NA,NA,"stop","L60P I72L A89H P96* V180I",5
"lib1","SARS-CoV-2","AAACTCCATATTATCC",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L Y35Q S53I C61H I88L",5
"lib1","SARS-CoV-2","AAACTCCCAATCAACA",2,7.7,9.63,-1.14,0.3,1.79,1.18,0.04,">1 nonsynonymous","S29T L60M K87S P133R",4
"lib1","SARS-CoV-2","AAACTCCCATCACCAA",4,24.88,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y21K R127C F156R",3
"lib1","SARS-CoV-2","AAACTCCCCAAGACAG",2,0.96,NA,NA,NA,NA,NA,NA,"stop","V11A N30F Y35F K87D R127G P177*",6
"lib1","SARS-CoV-2","AAACTCCCCCTTTAGA",2,63.14,6.16,-4.6,0.89,1.5,1.25,0.03,">1 nonsynonymous","V11N S45Y G83F L122C",4
"lib1","SARS-CoV-2","AAACTCCCTATCTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52F I88P K198G",3
"lib1","SARS-CoV-2","AAACTCCGACGATCTC",1,43.71,10.4,-0.37,0.05,2.89,1.02,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","AAACTCCTACGTTCGA",4,4.19,NA,NA,NA,NA,NA,NA,"stop","S19* K56S",2
"lib1","SARS-CoV-2","AAACTCCTCATGGTAA",5,55.75,8.45,-2.32,0.17,1.73,1.11,0.01,">1 nonsynonymous","D90G Y119L",2
"lib1","SARS-CoV-2","AAACTCCTCCCTGTCT",7,188.29,10.71,-0.05,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTCCTTGTGAATA",11,119.65,8.53,-2.23,0.17,1.5,1.12,0.01,">1 nonsynonymous","Y66K D90E N107A P197Q",4
"lib1","SARS-CoV-2","AAACTCGAAAAGCGAA",1,81.26,10.03,-0.73,0.1,2.24,1.06,0,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","AAACTCGACACAGTGA",2,6.98,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G116M K128G S147L V182R",4
"lib1","SARS-CoV-2","AAACTCGAGATAAAAC",2,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y A42M L60D V115R F126P",5
"lib1","SARS-CoV-2","AAACTCGATCCTATTA",7,66.07,9.74,-1.02,0.08,2.6,1.03,0,">1 nonsynonymous","C31M V77I",2
"lib1","SARS-CoV-2","AAACTCGCATCTACAC",4,1.62,NA,NA,NA,NA,NA,NA,"stop","I2Q V32A G51* N58L",4
"lib1","SARS-CoV-2","AAACTCGCCATTGGCG",3,65.04,9.89,-0.88,0.13,2.13,1.12,0.01,">1 nonsynonymous","P7F F134R",2
"lib1","SARS-CoV-2","AAACTCGGATTATATA",4,41.14,10.34,-0.42,0.13,2.42,1,0.01,">1 nonsynonymous","N64T W106T N151G Y178H T201M",5
"lib1","SARS-CoV-2","AAACTCGTATTTTCCG",3,0.28,NA,NA,NA,NA,NA,NA,"stop","C6* A14G G51L P96S F156D",5
"lib1","SARS-CoV-2","AAACTCGTGAACTAAC",1,21.95,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F12T T55L G83D F126L F167V",5
"lib1","SARS-CoV-2","AAACTCGTGAGACAAA",1,33.33,6,-4.76,1.15,1.5,1.17,0.01,">1 nonsynonymous","W23R P133L F167T",3
"lib1","SARS-CoV-2","AAACTCTAATCCGGAG",3,143.33,9.22,-1.55,0.14,1.86,1.17,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","AAACTCTAGGGAAACG",7,82.27,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","K94Y V153E F167S",3
"lib1","SARS-CoV-2","AAACTCTATAAAGCAG",9,70.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L38Q C61V K94T S200I",4
"lib1","SARS-CoV-2","AAACTCTATACGTTAT",2,35.14,6,-4.76,1.19,3,1.05,0,">1 nonsynonymous","K48N S113P S139L K199S",4
"lib1","SARS-CoV-2","AAACTCTATTTTGCGC",3,60.48,8.67,-2.09,0.15,2.63,1.08,0.01,">1 nonsynonymous","W23F G117V",2
"lib1","SARS-CoV-2","AAACTCTCAATATGGT",2,13.8,8.19,-2.57,0.51,1.5,1.22,0.06,">1 nonsynonymous","T63R G83S W106F G174C",4
"lib1","SARS-CoV-2","AAACTCTCGAAATTAT",3,6.08,7.59,-3.18,0.26,2.16,1.05,0.02,">1 nonsynonymous","S19T C61V D98Y L122Y",4
"lib1","SARS-CoV-2","AAACTCTGGCAAAGCC",1,10.51,10.2,-0.56,0.13,2.37,1,0.01,">1 nonsynonymous","L122G R127S",2
"lib1","SARS-CoV-2","AAACTCTGTAACATCA",4,39.19,9.93,-0.83,0.09,2.42,1,0,">1 nonsynonymous","R16D A42V F62L Q79H L187I",5
"lib1","SARS-CoV-2","AAACTCTTTAAAATCC",9,157.13,10.09,-0.67,0.11,2.44,1.07,0,">1 nonsynonymous","C61N W106R K199F",3
"lib1","SARS-CoV-2","AAACTCTTTTATACGC",2,1.13,NA,NA,NA,NA,NA,NA,"stop","F17* A89C F99I T140R H189W",5
"lib1","SARS-CoV-2","AAACTGAAAAGAAACT",6,0,NA,NA,NA,NA,NA,NA,"stop","D98* G152R",2
"lib1","SARS-CoV-2","AAACTGAACCATACAA",1,5.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q V180A",2
"lib1","SARS-CoV-2","AAACTGAACGTAGTCT",2,19.61,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","A42P L60A Q84N P96C",4
"lib1","SARS-CoV-2","AAACTGAATATACATA",2,19.91,9.95,-0.81,0.17,2.48,1.08,0.01,">1 nonsynonymous","Y39V I104S K128T",3
"lib1","SARS-CoV-2","AAACTGACCGGTCCTT",5,29.61,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20G N157F",2
"lib1","SARS-CoV-2","AAACTGACGAACATTA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H A33L V52Y I80V D90R",5
"lib1","SARS-CoV-2","AAACTGACGTACAAAC",1,19.04,7.3,-3.47,0.46,1.5,1.02,0.06,">1 nonsynonymous","I2R P177S F185T",3
"lib1","SARS-CoV-2","AAACTGAGCGACTATC",3,36.97,10.28,-0.49,0.12,2,1.04,0.01,">1 nonsynonymous","I28S Q163F",2
"lib1","SARS-CoV-2","AAACTGATAACATGAA",2,33.57,9.18,-1.58,0.09,2.86,1.11,0,">1 nonsynonymous","I2N V37I N157G T201R",4
"lib1","SARS-CoV-2","AAACTGATGTTATGAA",5,114.79,10.27,-0.49,0.03,2.93,1,0,">1 nonsynonymous","N120S I142M G155E",3
"lib1","SARS-CoV-2","AAACTGATTCTCGTCC",3,22.74,10.3,-0.46,0.08,2.75,1.11,0,">1 nonsynonymous","V37N D59A A190Y",3
"lib1","SARS-CoV-2","AAACTGCAATTAAACA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60E A67G N110I T148Y",4
"lib1","SARS-CoV-2","AAACTGCATATGAGAA",2,65.9,10.73,-0.03,0.08,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTGCATGCAGGGT",2,47.03,8.68,-2.09,0.18,1.5,1.07,0.02,">1 nonsynonymous","N64W D90V L122C K199D",4
"lib1","SARS-CoV-2","AAACTGCATTAAGTAC",10,65.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N1K L5R D34V Y119V Y175S",5
"lib1","SARS-CoV-2","AAACTGCCAATAAGCT",1,13.12,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S36P L95Q K128V E186I",4
"lib1","SARS-CoV-2","AAACTGCCCTCTGGAA",7,163.22,10.62,-0.14,0.04,2.92,1.04,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","AAACTGCCGTTAGAAA",1,14.02,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1D N109T S139L G152R",4
"lib1","SARS-CoV-2","AAACTGCCTTTGGGGG",3,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R E141Q",2
"lib1","SARS-CoV-2","AAACTGCGAACTACAT",14,231.96,9.37,-1.39,0.15,1.76,1.13,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","AAACTGCGCCATAATA",10,28.51,6,-4.76,2,3,1.21,0,">1 nonsynonymous","I2L L57Q W106G",3
"lib1","SARS-CoV-2","AAACTGCTACCGTATA",1,35.13,10.84,0.07,0.07,2.93,1.04,0,">1 nonsynonymous","Y35M E154T",2
"lib1","SARS-CoV-2","AAACTGCTCCCCCATA",8,69.81,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","AAACTGCTGGGGCCCT",3,85.62,10.66,-0.1,0.05,2.9,1.04,0,">1 nonsynonymous","A18Y S41D S147T",3
"lib1","SARS-CoV-2","AAACTGCTGTCCTATG",5,100.43,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86C Y93I",2
"lib1","SARS-CoV-2","AAACTGGAACACTTTA",7,94.72,9.87,-0.9,0.04,2.93,1.03,0,"1 nonsynonymous","L125V",1
"lib1","SARS-CoV-2","AAACTGGACTTAAATA",4,42.73,6.15,-4.61,0.63,1.5,1.2,0.01,">1 nonsynonymous","N40M G86W",2
"lib1","SARS-CoV-2","AAACTGGAGGGCAAAC",5,62.54,9.32,-1.44,0.18,1.66,1.16,0.01,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","AAACTGGATTCCATGT",1,26.61,10.73,-0.03,0.07,2.89,1.02,0,">1 nonsynonymous","R16M G152S",2
"lib1","SARS-CoV-2","AAACTGGCACCCAATA",12,99.9,10.68,-0.09,0.04,2.91,1.03,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","AAACTGGCGCGAACGC",1,27.71,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F47P P82Y F156S Y175S",4
"lib1","SARS-CoV-2","AAACTGGGAGATTCTA",2,84.9,10.24,-0.52,0.06,2.74,1.01,0,">1 nonsynonymous","N1H K56Y N130Y",3
"lib1","SARS-CoV-2","AAACTGGGGTCACGGA",2,23.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122G G155A V181R",3
"lib1","SARS-CoV-2","AAACTGGTACCTCCCC",5,66.67,9.49,-1.27,0.09,2.55,1.09,0,">1 nonsynonymous","N107K G174S",2
"lib1","SARS-CoV-2","AAACTGGTACGTCAAA",4,6.39,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","AAACTGGTACTAATTT",1,38.16,8.36,-2.41,0.24,1.94,1.17,0.02,">1 nonsynonymous","G83R D97F Y119L",3
"lib1","SARS-CoV-2","AAACTGTAACACTGAC",8,98.2,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11E N157M",2
"lib1","SARS-CoV-2","AAACTGTAACATTAAA",2,6.97,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6L A33T A81V K87S Y91M T100E",6
"lib1","SARS-CoV-2","AAACTGTAAGAGGTTG",2,49.57,8.98,-1.79,0.08,2.82,1.12,0,"1 nonsynonymous","Y143E",1
"lib1","SARS-CoV-2","AAACTGTACCATGACC",1,44.28,10.88,0.11,0.07,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AAACTGTACTACAGAA",1,31.81,10.67,-0.09,0.06,2.94,1.05,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AAACTGTAGTCCTCAA",5,18.84,7.16,-3.6,0.39,1.75,1.04,0.04,">1 nonsynonymous","T15R V65G A105R",3
"lib1","SARS-CoV-2","AAACTGTATCGATAAC",4,46,10.14,-0.63,0.07,2.79,1.03,0,">1 nonsynonymous","F47I L122E F185L",3
"lib1","SARS-CoV-2","AAACTGTCAAAATTAA",1,3.46,NA,NA,NA,NA,NA,NA,"stop","T55* N107G K132R",3
"lib1","SARS-CoV-2","AAACTGTCCATTTACC",5,29.59,6.77,-3.99,0.36,1.5,1.11,0.02,">1 nonsynonymous","N4T F99V V115S T140F",4
"lib1","SARS-CoV-2","AAACTGTCCTGAGATA",6,46.21,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y93L R136W",2
"lib1","SARS-CoV-2","AAACTGTCTGGTTATA",7,0.32,NA,NA,NA,NA,NA,NA,"stop","R16S D98* P149L",3
"lib1","SARS-CoV-2","AAACTGTGATTGCTGG",1,10.1,9.47,-1.3,0.26,1.63,1.19,0.03,">1 nonsynonymous","R16Y S36R C102V",3
"lib1","SARS-CoV-2","AAACTTAAATATCGGA",4,36.3,6.12,-4.64,0.79,1.5,1.17,0.02,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","AAACTTAAATCCATAT",4,69.45,6,-4.76,1.47,1.5,1.22,0.01,">1 nonsynonymous","Y93E G174I",2
"lib1","SARS-CoV-2","AAACTTAAATTTAATC",6,33.9,7.94,-2.82,0.28,1.5,1.04,0.03,">1 nonsynonymous","Y93C Q163Y",2
"lib1","SARS-CoV-2","AAACTTAATGCGGAGC",7,49.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2L Y39N K48G I104K P133N",5
"lib1","SARS-CoV-2","AAACTTAATGTAAAAT",10,4.7,NA,NA,NA,NA,NA,NA,"stop","K56* V103D I142V V173R R179K",5
"lib1","SARS-CoV-2","AAACTTACATAACGCG",19,363.25,10.31,-0.45,0.03,2.85,1.03,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","AAACTTACCCGCCGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L A67C P197Q",3
"lib1","SARS-CoV-2","AAACTTACCCTATTTA",4,43.14,9.6,-1.17,0.1,1.88,1.13,0,">1 nonsynonymous","V65F N92S",2
"lib1","SARS-CoV-2","AAACTTACTATGAACA",3,1.03,NA,NA,NA,NA,NA,NA,"stop","G9I R27K D59* F99I",4
"lib1","SARS-CoV-2","AAACTTACTATTAAGG",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y A33N Y50S",3
"lib1","SARS-CoV-2","AAACTTAGAGAGTAGG",3,10.92,10.89,0.12,0.17,2.94,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAACTTAGCTATAGGC",3,6.37,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5P L183S",2
"lib1","SARS-CoV-2","AAACTTAGGAACGAAA",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K G51V T85V",3
"lib1","SARS-CoV-2","AAACTTAGTTGGATCA",4,48.13,6.51,-4.25,0.53,1.5,1.15,0.03,">1 nonsynonymous","F8G Y121V",2
"lib1","SARS-CoV-2","AAACTTATAGCTACCT",1,0.32,NA,NA,NA,NA,NA,NA,"stop","G9P N107I Y143*",3
"lib1","SARS-CoV-2","AAACTTATCATATTAG",5,62.97,10.83,0.06,0.06,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTTATCTAGAGGT",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F44S I88W A105* F160S V173Y",5
"lib1","SARS-CoV-2","AAACTTATGAAACTCA",6,4.5,NA,NA,NA,NA,NA,NA,"stop","L5K V173M S200*",3
"lib1","SARS-CoV-2","AAACTTATGACTAACT",7,13.38,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51S P96D Y121N S147N F156E",5
"lib1","SARS-CoV-2","AAACTTATGATTTCTG",1,6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A89L G152Y C158R",3
"lib1","SARS-CoV-2","AAACTTATGCAGGCCA",1,19.23,10.7,-0.06,0.06,2.93,1,0,">1 nonsynonymous","L122S I142Y",2
"lib1","SARS-CoV-2","AAACTTATTCAAAACC",2,25.91,10.5,-0.27,0.08,2.89,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","AAACTTATTCATAAAG",1,22.87,6.95,-3.81,0.56,1.5,1.01,0.06,">1 nonsynonymous","T100Y I104P P149S",3
"lib1","SARS-CoV-2","AAACTTATTCGCTCCG",4,59.63,8.91,-1.86,0.07,2.69,1.13,0,">1 nonsynonymous","L5H F12I T100R Y119S",4
"lib1","SARS-CoV-2","AAACTTATTTCTAAGC",1,55.66,10.05,-0.71,0.07,2.64,1.04,0,">1 nonsynonymous","S45L Y178N",2
"lib1","SARS-CoV-2","AAACTTCAAATCCAAA",3,41.72,6,-4.76,1.22,1.5,1.17,0.02,">1 nonsynonymous","S113E E135T",2
"lib1","SARS-CoV-2","AAACTTCACTCATATA",5,53.45,10.57,-0.2,0.05,2.87,1.08,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","AAACTTCAGCAGCCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","AAACTTCATACTTCTA",4,30.75,6,-4.76,2,1.5,1.35,0.06,">1 nonsynonymous","A42S D59I Q84P G166L",4
"lib1","SARS-CoV-2","AAACTTCCACACTCAA",5,63.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D112S Y121N",2
"lib1","SARS-CoV-2","AAACTTCCCGACCCTC",4,64.79,9.74,-1.02,0.12,1.95,1.09,0.01,">1 nonsynonymous","E10T A22E K26R F62K",4
"lib1","SARS-CoV-2","AAACTTCCGACCAGGT",2,111.85,8.72,-2.04,0.08,2.78,1.1,0,">1 nonsynonymous","N64L D98N G117F",3
"lib1","SARS-CoV-2","AAACTTCCTCGTTAAC",2,17.11,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","E10L A42M T55D K56M F62R L111M Y123T",7
"lib1","SARS-CoV-2","AAACTTCGAAATTCCG",4,146.83,10.09,-0.68,0.06,2.88,1.06,0,">1 nonsynonymous","K114L G174L",2
"lib1","SARS-CoV-2","AAACTTCGAGAAGAAT",2,14.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y A18E D90V N110G G117T",5
"lib1","SARS-CoV-2","AAACTTCGGATAGGGT",5,18.51,6.47,-4.3,0.19,1.5,1.09,0.01,">1 nonsynonymous","E10Q Y66L A89G P96A P149L",5
"lib1","SARS-CoV-2","AAACTTCTAACACAAT",1,19.45,9.92,-0.84,0.18,2.19,1.02,0.02,">1 nonsynonymous","A33D L95V P149D",3
"lib1","SARS-CoV-2","AAACTTCTAACCTGGT",2,71.67,8.56,-2.21,0.15,1.74,1.13,0.01,">1 nonsynonymous","C31M L60Y Y178I",3
"lib1","SARS-CoV-2","AAACTTGAAAACAAAT",4,11.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16S P82S I142K L183G",4
"lib1","SARS-CoV-2","AAACTTGAAACTTTGT",1,11.7,6.24,-4.52,0.54,1.72,1.08,0.01,">1 nonsynonymous","C6Y G51T Y66N G101W Q144W",5
"lib1","SARS-CoV-2","AAACTTGACCTTCACC",5,109.33,10.73,-0.03,0.05,2.94,1.04,0,">1 nonsynonymous","P7K V37N",2
"lib1","SARS-CoV-2","AAACTTGAGGGCAATT",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I F62D T148A Q176K",4
"lib1","SARS-CoV-2","AAACTTGATAGCATGG",10,0.51,NA,NA,NA,NA,NA,NA,"stop","G51* Y66L Y91D G152D",4
"lib1","SARS-CoV-2","AAACTTGCGATATCTC",1,23.48,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","N13I P133H F167N",3
"lib1","SARS-CoV-2","AAACTTGGAAACATTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y D90S",2
"lib1","SARS-CoV-2","AAACTTGGCAACTTTG",9,42.17,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A105G D112T G152I Y165V K199G",5
"lib1","SARS-CoV-2","AAACTTGGCACGATCA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","S29Y Y50W V71G G83N D97W E154* P161D",7
"lib1","SARS-CoV-2","AAACTTGGTGGTGGCA",4,141.38,8.82,-1.95,0.07,2.82,1.06,0,">1 nonsynonymous","A81S Y119N F160I",3
"lib1","SARS-CoV-2","AAACTTGTACTACATT",8,158.61,10.05,-0.72,0.04,2.92,1.02,0,">1 nonsynonymous","Y91W T100L L125A",3
"lib1","SARS-CoV-2","AAACTTGTACTTTGTG",6,1.37,NA,NA,NA,NA,NA,NA,"stop","S69W P82* N118* S139D E154I",5
"lib1","SARS-CoV-2","AAACTTTAAGAAAAAT",2,15.9,9.18,-1.59,0.09,2.78,1.1,0,">1 nonsynonymous","A33T G116V F156Y",3
"lib1","SARS-CoV-2","AAACTTTAAGTACAGT",9,124.78,10.66,-0.11,0.02,2.94,1.03,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","AAACTTTACGCTTTTT",3,114.78,8.05,-2.71,0.14,1.85,1.16,0.01,">1 nonsynonymous","C31M N151F F160T G174K T201P",5
"lib1","SARS-CoV-2","AAACTTTATAATGGTA",6,78.44,10.72,-0.05,0.05,2.94,1.02,0,"1 nonsynonymous","N40P",1
"lib1","SARS-CoV-2","AAACTTTATCGAATGT",1,28.88,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y50S V77M F167Y",3
"lib1","SARS-CoV-2","AAACTTTCACAAAACA",2,17.46,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","L57N Y91I S139R",3
"lib1","SARS-CoV-2","AAACTTTCCTGTTATG",5,0.58,NA,NA,NA,NA,NA,NA,"stop","N13T D98* W106R D112G",4
"lib1","SARS-CoV-2","AAACTTTCTAACATCA",1,18.57,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","S41P G86R G116R",3
"lib1","SARS-CoV-2","AAACTTTCTCGAAGAA",3,46.94,9.57,-1.2,0.2,1.74,1.13,0.02,">1 nonsynonymous","L5E I28E",2
"lib1","SARS-CoV-2","AAACTTTGAACACCAA",2,14.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137K",1
"lib1","SARS-CoV-2","AAACTTTGGAACAGTA",7,78.9,10.25,-0.51,0.06,2.27,1,0,">1 nonsynonymous","F8M I88L Q168Y",3
"lib1","SARS-CoV-2","AAACTTTTGCTATCGT",4,62.74,10.73,-0.03,0.06,2.93,1,0,"1 nonsynonymous","I2W",1
"lib1","SARS-CoV-2","AAACTTTTTAGGTCCT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","C6V W23F G86R R127*",4
"lib1","SARS-CoV-2","AAAGAAAAAAAAGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V K128N E186Y",3
"lib1","SARS-CoV-2","AAAGAAAAAATCCCGC",1,25.39,10.75,-0.01,0.08,2.81,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAAAAACTAGAGT",4,64.08,6.37,-4.39,0.41,1.5,1.14,0.01,">1 nonsynonymous","T3V N58T N107H R136G",4
"lib1","SARS-CoV-2","AAAGAAAAAGAAGAGG",1,30.68,9.33,-1.44,0.09,2.66,1.06,0,">1 nonsynonymous","K48F K114G",2
"lib1","SARS-CoV-2","AAAGAAAAAGGTCACA",5,53.08,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20M I142R",2
"lib1","SARS-CoV-2","AAAGAAAAATCCGCTT",7,35.4,6.25,-4.52,0.82,1.5,1.13,0.05,">1 nonsynonymous","R25L K48R T85Y K132W",4
"lib1","SARS-CoV-2","AAAGAAAACACTATTA",12,29.75,10.17,-0.59,0.31,1.5,1,0.04,">1 nonsynonymous","T3L N13H Y35D Q84C A145T",5
"lib1","SARS-CoV-2","AAAGAAAAGAATCCAT",1,66.71,10.8,0.03,0.05,2.91,1.05,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","AAAGAAAAGACCCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L L38S D75Y R127S",4
"lib1","SARS-CoV-2","AAAGAAAAGAGGAGAC",2,30.98,10.83,0.07,0.09,2.85,1.08,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","AAAGAAAAGCCAGGTA",5,987.32,8.95,-1.81,0.05,2.9,1.06,0,">1 nonsynonymous","K87N Y119F T201W",3
"lib1","SARS-CoV-2","AAAGAAAAGGATTATT",3,83.54,9.38,-1.38,0.06,2.72,1.1,0,">1 nonsynonymous","V115R G152F Q168N",3
"lib1","SARS-CoV-2","AAAGAAAATACACTGA",3,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D T46R D97L",3
"lib1","SARS-CoV-2","AAAGAAAATAGAACTT",6,58.79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37I K48L G74Y K94Q F99N N118L R124V",7
"lib1","SARS-CoV-2","AAAGAAAATCTTTTAA",7,7.48,NA,NA,NA,NA,NA,NA,"stop","K26A N107R P133H T140N S184*",5
"lib1","SARS-CoV-2","AAAGAAAATGAATTGT",5,121.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V37S F47A S53W R73W Q176W",5
"lib1","SARS-CoV-2","AAAGAAAATGCGTGAT",1,97.49,10.79,0.03,0.07,2.85,1.07,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","AAAGAAAATGTCCATT",1,26.38,10.69,-0.08,0.12,2.9,1.02,0.01,"1 nonsynonymous","G152H",1
"lib1","SARS-CoV-2","AAAGAAACAATAGATT",2,53.5,6.16,-4.61,0.74,1.5,1.15,0.02,">1 nonsynonymous","S36F V71N L122S S129T G152N G172V",6
"lib1","SARS-CoV-2","AAAGAAACACATACAC",1,61.3,10.37,-0.39,0.06,2.92,1.04,0,">1 nonsynonymous","F44K T201W",2
"lib1","SARS-CoV-2","AAAGAAACACTACCTT",8,1.24,NA,NA,NA,NA,NA,NA,"stop","A42I L95* F126D",3
"lib1","SARS-CoV-2","AAAGAAACAGGAGATC",1,21.01,10.98,0.22,0.13,2.9,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAAACATACCATA",10,111.02,10.68,-0.09,0.06,2.9,1.06,0,"1 nonsynonymous","F160H",1
"lib1","SARS-CoV-2","AAAGAAACCAGTAATA",5,152.95,9.87,-0.9,0.09,2.22,1.01,0,"1 nonsynonymous","I28T",1
"lib1","SARS-CoV-2","AAAGAAACCATTGAGG",7,46.73,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86R S113R Y121N",3
"lib1","SARS-CoV-2","AAAGAAACCTACAAAA",8,113.05,10.65,-0.12,0.06,2.87,1.1,0,">1 nonsynonymous","V32R N64F",2
"lib1","SARS-CoV-2","AAAGAAACGAATTACA",12,1.06,NA,NA,NA,NA,NA,NA,"stop","R16* F44S V52I A67D N118V",5
"lib1","SARS-CoV-2","AAAGAAACGTGAAAAG",1,38.47,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","R73P R127H P177M",3
"lib1","SARS-CoV-2","AAAGAAACTATTAAAC",4,36.45,10.44,-0.32,0.08,2.96,1.01,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","AAAGAAACTATTAACT",1,10.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T85E G116P S129Y D137R",4
"lib1","SARS-CoV-2","AAAGAAACTCATCCAA",3,22.18,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K87Q N92R Y119V",3
"lib1","SARS-CoV-2","AAAGAAAGAAAAATCC",2,51.2,9.29,-1.47,0.13,1.73,1.14,0.01,">1 nonsynonymous","E10A G86S",2
"lib1","SARS-CoV-2","AAAGAAAGAAAATACT",1,31.22,10.82,0.06,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAAAGACGACAGT",1,43.61,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18T Y39W K128M C150Q G155S",5
"lib1","SARS-CoV-2","AAAGAAAGATTCAACA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","N4* L38S S45L N107L F126R",5
"lib1","SARS-CoV-2","AAAGAAAGCTCACATA",6,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P C61G G86D V181T",4
"lib1","SARS-CoV-2","AAAGAAATAAGTTAAT",2,32.68,9.91,-0.86,0.19,1.92,1.1,0.01,">1 nonsynonymous","T85S V103L",2
"lib1","SARS-CoV-2","AAAGAAATAATACGTA",1,11.53,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95Q V103R V115T T140C",4
"lib1","SARS-CoV-2","AAAGAAATACAAAGAC",2,1.83,NA,NA,NA,NA,NA,NA,"stop","L5D Q176*",2
"lib1","SARS-CoV-2","AAAGAAATACATATAC",1,25.01,6.17,-4.59,1.49,1.5,1.35,0.07,">1 nonsynonymous","P82T T148M T170N",3
"lib1","SARS-CoV-2","AAAGAAATCAAGTGAA",1,40.27,10.55,-0.21,0.05,2.9,1.08,0,">1 nonsynonymous","K48S S147M",2
"lib1","SARS-CoV-2","AAAGAAATCACCGATA",2,11.89,6,-4.76,1.81,1.5,1.16,0.05,">1 nonsynonymous","L5K C102L G116Q V173T K199I",5
"lib1","SARS-CoV-2","AAAGAAATCAGAGATG",7,143.53,10.84,0.08,0.07,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAGAAATGACAATAA",6,50.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C61A T100A R136L S147F Y175T",5
"lib1","SARS-CoV-2","AAAGAAATTAAACAAA",2,35.87,9.33,-1.43,0.18,2.49,1.16,0.01,">1 nonsynonymous","G51K V115N Q144K G152D",4
"lib1","SARS-CoV-2","AAAGAAATTAACGTAC",5,22.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N1Q I80N A89V T170H",4
"lib1","SARS-CoV-2","AAAGAAATTATGGACC",2,11.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G P161F",2
"lib1","SARS-CoV-2","AAAGAAATTGGCTAGG",17,4.88,NA,NA,NA,NA,NA,NA,"stop","C61A K94R S113T L122* G155I",5
"lib1","SARS-CoV-2","AAAGAACAAACTCGCG",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q D68A P149Q",3
"lib1","SARS-CoV-2","AAAGAACAAATGAGAC",1,21.18,9.64,-1.12,0.21,2.27,1.12,0.02,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","AAAGAACAACATAGCT",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L K56A A81L D98E",4
"lib1","SARS-CoV-2","AAAGAACAAGAAGTAG",1,14.84,9.64,-1.13,0.15,1.83,1.16,0.01,">1 nonsynonymous","C49V N58S",2
"lib1","SARS-CoV-2","AAAGAACAAGATTGAA",1,28.4,6.62,-4.14,0.39,1.57,1.16,0.02,">1 nonsynonymous","L38H C61E Y91D",3
"lib1","SARS-CoV-2","AAAGAACAAGGATAAT",2,6.39,7.67,-3.09,0.24,3,1.1,0.01,">1 nonsynonymous","S43D W106L S139I",3
"lib1","SARS-CoV-2","AAAGAACAATTAACGT",1,14.75,8.66,-2.11,0.22,2.71,1.17,0.02,">1 nonsynonymous","K26C V37L G117M Y143F",4
"lib1","SARS-CoV-2","AAAGAACACCACTGTG",2,65.97,10.78,0.02,0.09,2.89,1.05,0,">1 nonsynonymous","V37S C61L",2
"lib1","SARS-CoV-2","AAAGAACACCAGGCTA",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T A18E F99E G116K K199S",5
"lib1","SARS-CoV-2","AAAGAACACGATAGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R A81R I138K G172L",4
"lib1","SARS-CoV-2","AAAGAACACTTGATGG",1,27.34,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D90C A105P",2
"lib1","SARS-CoV-2","AAAGAACAGTGGGACT",2,31.18,10.13,-0.64,0.08,2.19,1.02,0,">1 nonsynonymous","I88V P96N",2
"lib1","SARS-CoV-2","AAAGAACATAAAATAT",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V V77G D90R G152S",4
"lib1","SARS-CoV-2","AAAGAACATAAACCAA",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T N58T G86R V115R S147I N157A",6
"lib1","SARS-CoV-2","AAAGAACATAGCCTCA",2,39.98,9.75,-1.02,0.16,1.95,1.08,0.01,">1 nonsynonymous","T3N S45V G152R P197D",4
"lib1","SARS-CoV-2","AAAGAACATGTCGCAA",8,64.86,10.61,-0.15,0.07,2.89,1,0,">1 nonsynonymous","S41A P149F",2
"lib1","SARS-CoV-2","AAAGAACATGTGTCCC",5,42.12,10.83,0.07,0.08,2.89,1.07,0,">1 nonsynonymous","D90N L122K",2
"lib1","SARS-CoV-2","AAAGAACCATCCGACA",1,26.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S45T G86W K128P",3
"lib1","SARS-CoV-2","AAAGAACCCTTTTGGA",2,53.5,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","AAAGAACCGACATATA",1,7.64,6,-4.76,2,3,1.14,0.03,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","AAAGAACCGCGTTTAC",14,145.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4L V32C N107G G152P",4
"lib1","SARS-CoV-2","AAAGAACCTTCCGGTT",11,1.26,NA,NA,NA,NA,NA,NA,"stop","N4* R16T G86T F99V",4
"lib1","SARS-CoV-2","AAAGAACCTTTATACA",3,19.92,10.36,-0.41,0.1,2.78,1.17,0.01,">1 nonsynonymous","S41Q A81V P197A",3
"lib1","SARS-CoV-2","AAAGAACGAATTATAA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","S36* F62Y D97S",3
"lib1","SARS-CoV-2","AAAGAACGGCTGACGT",8,1.47,NA,NA,NA,NA,NA,NA,"stop","D98* N110Y L183Q",3
"lib1","SARS-CoV-2","AAAGAACTAACCTGAA",7,18.76,6.37,-4.4,0.59,1.5,1.2,0.01,">1 nonsynonymous","S43F D98R V115L R179I",4
"lib1","SARS-CoV-2","AAAGAACTTAAACCTG",4,42.02,9.71,-1.05,0.12,2.63,1.1,0.01,"1 nonsynonymous","G74C",1
"lib1","SARS-CoV-2","AAAGAACTTAGGGCTG",3,15.93,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","A14V P54R C150L A192G T201N",5
"lib1","SARS-CoV-2","AAAGAACTTCCTACCG",3,9.83,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","V103Q N110S",2
"lib1","SARS-CoV-2","AAAGAACTTGCCAACG",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81D F99S",2
"lib1","SARS-CoV-2","AAAGAAGAAATGAGAC",6,69.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D34R S41K G117D Y178R G196R",5
"lib1","SARS-CoV-2","AAAGAAGAGATACACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","AAAGAAGATGAACTGC",2,18.25,9.59,-1.17,0.15,1.82,1.08,0.01,">1 nonsynonymous","F12L G51T",2
"lib1","SARS-CoV-2","AAAGAAGCCTTTTCTA",6,0.78,NA,NA,NA,NA,NA,NA,"stop","Y175* V180I",2
"lib1","SARS-CoV-2","AAAGAAGGCGCAAAAC",1,5.41,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","P82R L183E",2
"lib1","SARS-CoV-2","AAAGAAGGGCTAATTT",1,7.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V37L N92L I104N Y119I T170S",5
"lib1","SARS-CoV-2","AAAGAAGTATCCAATC",3,6.69,10.19,-0.58,0.12,2.8,1.01,0.01,">1 nonsynonymous","G9P A33M T100S A192S T201V",5
"lib1","SARS-CoV-2","AAAGAAGTATCTCCAG",2,11.36,10.01,-0.75,0.28,1.96,1,0.03,">1 nonsynonymous","E10L N64L N110T Q144R",4
"lib1","SARS-CoV-2","AAAGAAGTCAACACGG",7,97.95,10.12,-0.64,0.1,2.58,1.04,0,">1 nonsynonymous","K87R P96R",2
"lib1","SARS-CoV-2","AAAGAAGTGGACCAGT",1,23.86,10.83,0.07,0.06,2.96,1.03,0,">1 nonsynonymous","Q84S Q168F",2
"lib1","SARS-CoV-2","AAAGAAGTGTCAGAAC",4,31.58,9.67,-1.1,0.2,2.14,1.09,0.02,">1 nonsynonymous","C6M D97S E141S",3
"lib1","SARS-CoV-2","AAAGAAGTGTTAGTAC",1,34.85,10.76,-0.01,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAAGTTCAGAAAT",3,300.08,9.76,-1.01,0.06,2.56,1.06,0,">1 nonsynonymous","K56M N64C T85R D98Y E154D",5
"lib1","SARS-CoV-2","AAAGAATAAAAACCCA",7,40.68,6.25,-4.51,0.82,1.5,1.25,0.03,">1 nonsynonymous","D90T T100A S139L",3
"lib1","SARS-CoV-2","AAAGAATAAAAGTTAA",2,74.58,10.71,-0.05,0.05,2.96,1.03,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","AAAGAATAAACGTACC",4,67.93,9.94,-0.82,0.09,1.99,1.06,0,"1 nonsynonymous","Y50V",1
"lib1","SARS-CoV-2","AAAGAATAAAGTTCCA",3,28.01,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83S F99L W106A",3
"lib1","SARS-CoV-2","AAAGAATAAATTATGA",1,7.96,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","D90F D97W S113R",3
"lib1","SARS-CoV-2","AAAGAATAACCGACCT",4,28.96,9.76,-1,0.22,2.32,1.06,0.02,">1 nonsynonymous","V11A C61S",2
"lib1","SARS-CoV-2","AAAGAATAATAACAAC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","I2V F62* K94Y T100N G117V L122G Y143Q",7
"lib1","SARS-CoV-2","AAAGAATACACTCCCT",2,28.75,9.63,-1.13,0.04,2.94,1.02,0,">1 nonsynonymous","K26V Y159F",2
"lib1","SARS-CoV-2","AAAGAATAGTAGCATG",1,46.58,8.81,-1.95,0.1,2.67,1.13,0,">1 nonsynonymous","F44Y G146M",2
"lib1","SARS-CoV-2","AAAGAATAGTATCTAA",3,42.03,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G74R I104M N120T E135R V173Y",5
"lib1","SARS-CoV-2","AAAGAATATAGTTATG",2,11.33,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","G51V W106E Q168S",3
"lib1","SARS-CoV-2","AAAGAATCAAATATAG",1,40.71,8.15,-2.61,0.1,2.06,1.07,0,">1 nonsynonymous","D98L P177S",2
"lib1","SARS-CoV-2","AAAGAATCAACATCTA",2,23.42,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R27D G101Y P149K F160V",4
"lib1","SARS-CoV-2","AAAGAATCTAGTTACT",7,102.14,9.66,-1.1,0.05,2.93,1.06,0,">1 nonsynonymous","T15E A33W G146T",3
"lib1","SARS-CoV-2","AAAGAATCTTAAAACT",2,2.18,NA,NA,NA,NA,NA,NA,"stop","T15F L57N P82I Y143*",4
"lib1","SARS-CoV-2","AAAGAATGAAAATAAA",1,8.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S139L Y165I",2
"lib1","SARS-CoV-2","AAAGAATGCACTCGGG",2,39.08,10.27,-0.5,0.09,2.82,1,0,">1 nonsynonymous","S41M D97Y V115N",3
"lib1","SARS-CoV-2","AAAGAATGGCCTTAAT",7,118.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D90Y Q176T",2
"lib1","SARS-CoV-2","AAAGAATGTAAAGAAC",10,78.01,6,-4.76,1.67,1.5,1.17,0.02,">1 nonsynonymous","V77K L122F Y159M",3
"lib1","SARS-CoV-2","AAAGAATTACTGCACA",4,14.61,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V11K A42L F62K I88M Y175L",5
"lib1","SARS-CoV-2","AAAGAATTATATAAAG",2,31.31,10.59,-0.18,0.05,2.94,1.02,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","AAAGAATTCCAACGGC",8,110.88,10.29,-0.47,0.05,2.79,1.07,0,">1 nonsynonymous","T15L D98H",2
"lib1","SARS-CoV-2","AAAGAATTGTAAAGGC",1,29.9,10.78,0.02,0.04,2.98,1,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","AAAGACAAAAAATAGT",3,33.24,9.95,-0.81,0.11,2.62,1.05,0,">1 nonsynonymous","L5R Y93F",2
"lib1","SARS-CoV-2","AAAGACAACACTGCGC",6,43.33,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S45V F185D",2
"lib1","SARS-CoV-2","AAAGACAACATTCTTG",4,29.9,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S19G L60C A67Y Y91T T170A",5
"lib1","SARS-CoV-2","AAAGACAACCATGAAG",1,2.03,NA,NA,NA,NA,NA,NA,"stop","I2L R73* T100F N107P P133L R179V",6
"lib1","SARS-CoV-2","AAAGACAATCTCTACC",4,56.45,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2L N40G C102W C150A",4
"lib1","SARS-CoV-2","AAAGACAATGAAAAGG",4,21.87,8.44,-2.33,0.2,1.72,1.19,0.01,">1 nonsynonymous","N1K L57I A67F Y123R E154V",5
"lib1","SARS-CoV-2","AAAGACAATTTCAGAG",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47C G166I",2
"lib1","SARS-CoV-2","AAAGACACAAAAAAAA",9,3.51,NA,NA,NA,NA,NA,NA,"stop","A33L A42T P149R G155Y T201*",5
"lib1","SARS-CoV-2","AAAGACACAATGGTAA",4,79.53,10.66,-0.11,0.06,2.86,1.03,0,">1 nonsynonymous","E141A T201R",2
"lib1","SARS-CoV-2","AAAGACACACTCGGTA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib1","SARS-CoV-2","AAAGACACCATAAATG",2,40.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50E G152S",2
"lib1","SARS-CoV-2","AAAGACAGACATTTTT",4,24.45,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2K K26W F99K A105S",4
"lib1","SARS-CoV-2","AAAGACAGTGCGTAAA",4,34.74,9.99,-0.77,0.11,1.94,1.04,0,">1 nonsynonymous","W106V G146A",2
"lib1","SARS-CoV-2","AAAGACATATAAGCAC",6,41.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72W",1
"lib1","SARS-CoV-2","AAAGACATCATTTTTA",11,56.44,6.02,-4.74,0.65,1.5,1.13,0.01,">1 nonsynonymous","S45L T140M C150K P161H",4
"lib1","SARS-CoV-2","AAAGACATCCGAAAAA",2,45.59,10.75,-0.02,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGACATCCTGACAC",2,25.88,8.02,-2.74,0.32,1.5,1.11,0.03,">1 nonsynonymous","G83F D137N",2
"lib1","SARS-CoV-2","AAAGACATTTCGAGTT",1,42.5,8.44,-2.33,0.17,2.37,1.07,0.01,">1 nonsynonymous","N107D Y159H",2
"lib1","SARS-CoV-2","AAAGACATTTTCACAC",16,195.5,10.83,0.07,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGACCAAAGTGCCA",4,74.88,10.31,-0.46,0.04,2.95,1.03,0,">1 nonsynonymous","V37W S164I",2
"lib1","SARS-CoV-2","AAAGACCAATAATGAC",6,1.2,NA,NA,NA,NA,NA,NA,"stop","F62W A89* P149T",3
"lib1","SARS-CoV-2","AAAGACCATATGGAAA",2,30.74,9.83,-0.93,0.06,2.1,1.04,0,">1 nonsynonymous","F17I S36K",2
"lib1","SARS-CoV-2","AAAGACCATCCCCTTG",2,16.53,11.17,0.41,0.1,2.93,1,0.01,">1 nonsynonymous","C61S N171F H189G",3
"lib1","SARS-CoV-2","AAAGACCATCTCGACG",1,4.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","AAAGACCATGGAGTTA",15,175.83,10.66,-0.11,0.05,2.89,1.07,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","AAAGACCATTATCCCT",6,78.73,10.63,-0.14,0.09,2.86,1.04,0,">1 nonsynonymous","S41R T201K",2
"lib1","SARS-CoV-2","AAAGACCCAACTAGAT",3,44.23,10.83,0.07,0.09,2.83,1.06,0,">1 nonsynonymous","K56N N58M",2
"lib1","SARS-CoV-2","AAAGACCCAATGAAAC",4,61.55,10.74,-0.02,0.08,2.9,1.07,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","AAAGACCCAGTAACAT",1,0.19,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAAGACCCAGTCCCAA",6,100.8,10.78,0.02,0.06,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGACCGTAAACTAT",5,1.63,NA,NA,NA,NA,NA,NA,"stop","I28S T85N L122*",3
"lib1","SARS-CoV-2","AAAGACCGTTCTCCGA",4,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N Q84H R127L",3
"lib1","SARS-CoV-2","AAAGACCTACGACTAT",5,99.48,6.37,-4.39,0.65,1.5,1.2,0.04,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","AAAGACCTGCATCTCG",2,100.51,10.13,-0.63,0.06,2.7,1.04,0,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","AAAGACCTTTTCTCAT",1,8.86,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","V37T I88M D137C Q144W",4
"lib1","SARS-CoV-2","AAAGACGAACTTTTAC",3,38.34,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T85Q F167H G174V S200L",4
"lib1","SARS-CoV-2","AAAGACGAAGGCCTCA",2,18.36,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6K R27W D75L Q79R N107T A192L",6
"lib1","SARS-CoV-2","AAAGACGAATGGGTGA",2,15.24,6.17,-4.59,1.74,1.5,1.08,0.01,">1 nonsynonymous","W23M S45L P149L",3
"lib1","SARS-CoV-2","AAAGACGAGAAGACTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","E10I Y35M Q84K S184*",4
"lib1","SARS-CoV-2","AAAGACGAGTAAAGAA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","K56A I72R I88V E135* P149F N157F",6
"lib1","SARS-CoV-2","AAAGACGATTAGCATC",4,0.88,NA,NA,NA,NA,NA,NA,"stop","V37M S43* S113C",3
"lib1","SARS-CoV-2","AAAGACGCATAAAGCA",1,5.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14V S45K Y91K",3
"lib1","SARS-CoV-2","AAAGACGCGAGATGCA",4,26.85,10.79,0.02,0.08,2.93,1,0,"1 nonsynonymous","A33C",1
"lib1","SARS-CoV-2","AAAGACGCTTAATACT",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M E76G N110H",3
"lib1","SARS-CoV-2","AAAGACGGACAACCTG",15,229.93,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35E I142G P149K",3
"lib1","SARS-CoV-2","AAAGACGGCTGTCACA",2,6.66,6.72,-4.04,0.69,3,1.18,0.02,">1 nonsynonymous","G9V Y35Q L38R Y123T F134Y",5
"lib1","SARS-CoV-2","AAAGACGGCTTCATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118S Y143K",2
"lib1","SARS-CoV-2","AAAGACGGGTCACTAG",3,22.44,10.08,-0.68,0.13,2.48,1.15,0.01,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","AAAGACGGTGCTTGTT",11,38.93,7.91,-2.86,0.38,1.5,1,0.04,">1 nonsynonymous","D34I C61G L95V P133T",4
"lib1","SARS-CoV-2","AAAGACGTCGTCAGAG",6,76.91,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N107L Y143P",2
"lib1","SARS-CoV-2","AAAGACGTGAAACCGT",5,9.43,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12R V103R T201C",3
"lib1","SARS-CoV-2","AAAGACTATTTCCACA",1,33.17,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","K87W C158Q",2
"lib1","SARS-CoV-2","AAAGACTCAATCACAA",12,6.52,7.01,-3.75,0.21,2.53,1.09,0.01,">1 nonsynonymous","N13D N24V I88T",3
"lib1","SARS-CoV-2","AAAGACTCAGAATTGG",10,105.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R N107M",2
"lib1","SARS-CoV-2","AAAGACTGAATGTGAT",2,50,10.76,0,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGACTGCCATACAT",2,1.36,NA,NA,NA,NA,NA,NA,"stop","S43* T201N",2
"lib1","SARS-CoV-2","AAAGACTTCCAAGTCT",10,0.43,NA,NA,NA,NA,NA,NA,"stop","R27G D112*",2
"lib1","SARS-CoV-2","AAAGACTTGACTCATG",1,9.8,6.45,-4.32,1.15,1.5,1.08,0.02,">1 nonsynonymous","V37G S69V C150K N157I",4
"lib1","SARS-CoV-2","AAAGACTTGTAAATCG",2,13.09,6.87,-3.89,0.55,1.5,1.1,0.05,">1 nonsynonymous","A105H F126S Q144M P149L T201L",5
"lib1","SARS-CoV-2","AAAGAGAAGCTTCTTA",12,2.25,NA,NA,NA,NA,NA,NA,"stop","D90G D97*",2
"lib1","SARS-CoV-2","AAAGAGAAGGTTGTAA",4,6.91,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V37G T63M P82A G83M F167C",5
"lib1","SARS-CoV-2","AAAGAGAAGTAAATCG",1,5.55,10.02,-0.75,0.19,2.78,1,0.02,">1 nonsynonymous","F12L Q144H K198T",3
"lib1","SARS-CoV-2","AAAGAGAATATTAGTT",1,6.52,7.03,-3.74,0.58,2.52,1.16,0,">1 nonsynonymous","S19Y P96M K128H P177I",4
"lib1","SARS-CoV-2","AAAGAGAATCCAACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E P54G G83M W106K",4
"lib1","SARS-CoV-2","AAAGAGAATGAATTCC",6,68.08,10.61,-0.16,0.05,2.97,1,0,">1 nonsynonymous","E141G P149S V173Q",3
"lib1","SARS-CoV-2","AAAGAGAATTACATCC",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R V71M S139G T170S",4
"lib1","SARS-CoV-2","AAAGAGACCGCGAGCA",1,31.72,10.59,-0.18,0.07,2.96,1,0,">1 nonsynonymous","G83L T100V I138V",3
"lib1","SARS-CoV-2","AAAGAGACTAATACCG",4,12.16,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y35N I104K E141M G196W",4
"lib1","SARS-CoV-2","AAAGAGACTAGTGGAC",4,1.15,NA,NA,NA,NA,NA,NA,"stop","V11F F12H S41* C61W D68K K87L G116T T201Y",8
"lib1","SARS-CoV-2","AAAGAGACTCCTGAAA",2,120.88,9.52,-1.24,0.09,2.4,1.05,0,">1 nonsynonymous","K56V Q144L E154R",3
"lib1","SARS-CoV-2","AAAGAGAGAAGCAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","A33I N58Q L131*",3
"lib1","SARS-CoV-2","AAAGAGAGACTACGGG",6,11.48,6,-4.76,2,1.5,1.04,0.05,">1 nonsynonymous","N4S S41P L57T I88F F99S I142G",6
"lib1","SARS-CoV-2","AAAGAGAGAGCCCCGG",8,95.88,10.75,-0.02,0.09,2.89,1.08,0,">1 nonsynonymous","I28L Y39V",2
"lib1","SARS-CoV-2","AAAGAGAGCCCCTAGA",3,9.08,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42Y Y50V D68E K87E Y119D K132I R179Q",7
"lib1","SARS-CoV-2","AAAGAGAGGTCCCGAT",1,8.28,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I2Y G86R W106R",3
"lib1","SARS-CoV-2","AAAGAGATAACGCCAT",10,117.38,10.5,-0.26,0.03,2.9,1.04,0,">1 nonsynonymous","T46E T85R D98K",3
"lib1","SARS-CoV-2","AAAGAGATACGCCCCG",1,65.93,10.85,0.09,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAGATAGCAAAAA",2,6.93,8.77,-1.99,0.16,2.56,1.25,0.01,">1 nonsynonymous","V52Q E76S E154P G172R F185S",5
"lib1","SARS-CoV-2","AAAGAGATGAGCATAG",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C V103S N171S S200L",4
"lib1","SARS-CoV-2","AAAGAGATGATATACC",2,68.47,10.23,-0.53,0.04,2.94,1,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","AAAGAGATGCTTGCAT",11,94.35,8.93,-1.83,0.15,1.89,1.14,0.01,">1 nonsynonymous","I2L S41W F47M A105R L125S",5
"lib1","SARS-CoV-2","AAAGAGATTAATGACT",11,80.13,9.16,-1.6,0.09,2.82,1.11,0,">1 nonsynonymous","A145K G152H",2
"lib1","SARS-CoV-2","AAAGAGCAAACAACAT",2,35.72,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45W N92Y Y175K",3
"lib1","SARS-CoV-2","AAAGAGCAAACAGGCA",7,67.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G83P T100Y",2
"lib1","SARS-CoV-2","AAAGAGCAAGAAAAAT",4,72.55,9.94,-0.82,0.18,1.86,1.04,0.02,"1 nonsynonymous","D137V",1
"lib1","SARS-CoV-2","AAAGAGCACATAGATC",3,9.04,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","I2K L38T D90C C102V K114M F134R",6
"lib1","SARS-CoV-2","AAAGAGCAGTTAACAG",5,68.59,10.85,0.09,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAGCATAAACACT",8,207.15,10.79,0.03,0.06,2.86,1.07,0,">1 nonsynonymous","L5Q R16Y S164T",3
"lib1","SARS-CoV-2","AAAGAGCATGGAGCAA",2,66.22,10.69,-0.07,0.04,2.89,1.05,0,">1 nonsynonymous","K48I L122E",2
"lib1","SARS-CoV-2","AAAGAGCCAAAATCTT",1,33.42,8.64,-2.12,0.16,1.83,1.13,0.01,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","AAAGAGCCAAGAAGAT",2,27.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12I S19F N64L S69E K94F S129K V153Q",7
"lib1","SARS-CoV-2","AAAGAGCGAATATAAA",3,29.56,10.42,-0.35,0.07,2.93,1.04,0,">1 nonsynonymous","V65G D90Q",2
"lib1","SARS-CoV-2","AAAGAGCTAATATAAA",1,6.82,10.4,-0.37,0.06,2.97,1,0,">1 nonsynonymous","V65G D90Q",2
"lib1","SARS-CoV-2","AAAGAGCTATGACAAC",4,91.97,10.67,-0.09,0.11,2.8,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAGCTCTAAAAGA",12,54.14,6,-4.76,1.08,1.5,1.14,0.01,">1 nonsynonymous","I80T C150Y F167A",3
"lib1","SARS-CoV-2","AAAGAGGAAAAAAAAA",2,8.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N13P F17T N64K G86P S129A V181C",6
"lib1","SARS-CoV-2","AAAGAGGAAACTCAAA",1,30.4,9.83,-0.93,0.09,2.33,1.02,0,">1 nonsynonymous","C31H D97P K128P",3
"lib1","SARS-CoV-2","AAAGAGGAAGGCAGAA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M W23A F160H P191D",4
"lib1","SARS-CoV-2","AAAGAGGACGACCAGT",1,62.8,10.66,-0.11,0.05,2.84,1.07,0,">1 nonsynonymous","G9K P149Q T201Y",3
"lib1","SARS-CoV-2","AAAGAGGACTAAAAGC",9,80.6,6.29,-4.47,0.59,1.5,1.15,0.02,">1 nonsynonymous","I28E D59L T170M",3
"lib1","SARS-CoV-2","AAAGAGGATGCCAGAT",1,37.83,9.53,-1.23,0.09,2.7,1.1,0,">1 nonsynonymous","T55A Y121P",2
"lib1","SARS-CoV-2","AAAGAGGCCCCCCTAG",1,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R F99T V115C F160D",4
"lib1","SARS-CoV-2","AAAGAGGCTCCGCATG",6,2.47,NA,NA,NA,NA,NA,NA,"stop","S19* T46S G152A",3
"lib1","SARS-CoV-2","AAAGAGGTAGTCGCAT",1,36.34,8.91,-1.85,0.34,1.5,1,0.06,">1 nonsynonymous","C49L D98T K114N L122F",4
"lib1","SARS-CoV-2","AAAGAGGTCAAAATTA",2,1.93,NA,NA,NA,NA,NA,NA,"stop","R27C S41I D137L Y143*",4
"lib1","SARS-CoV-2","AAAGAGGTCACCGGGG",1,41.12,10.69,-0.07,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAGGTCTTAAACC",7,36.14,6.93,-3.83,0.16,1.63,1.17,0.01,">1 nonsynonymous","V11Y L57S G152D V180D P197F",5
"lib1","SARS-CoV-2","AAAGAGGTGTTAACAA",2,4.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","AAAGAGGTTTGACCTA",4,83.44,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35S D59A G86T R136I Y175P",5
"lib1","SARS-CoV-2","AAAGAGTAACAGATTA",1,9.45,10.87,0.1,0.1,2.96,1,0,">1 nonsynonymous","T63A I138N T201S",3
"lib1","SARS-CoV-2","AAAGAGTAGAGACTCT",8,121.72,10.45,-0.31,0.04,2.92,1.02,0,">1 nonsynonymous","A42L G116N",2
"lib1","SARS-CoV-2","AAAGAGTAGTTGAGGG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","F12L R27* E135F N157P S184R",5
"lib1","SARS-CoV-2","AAAGAGTCATATAAAA",5,112.73,10.65,-0.12,0.07,2.86,1.08,0,"1 nonsynonymous","S200L",1
"lib1","SARS-CoV-2","AAAGAGTCATTTGTAG",9,135.32,10.77,0.01,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGAGTCCGGGGCTG",1,24.53,10.01,-0.75,0.08,2.86,1.06,0,">1 nonsynonymous","T140L P149V T170S",3
"lib1","SARS-CoV-2","AAAGAGTTTCTATTTC",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G Y35H N120Y I142V E154Y V182N",6
"lib1","SARS-CoV-2","AAAGATAAAAATACTA",10,255.15,10.76,0,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGATAAAATAGACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R G86L A105P R179V",4
"lib1","SARS-CoV-2","AAAGATAAATATAAGC",2,95.98,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39N P82R Y93C G116S P161F",5
"lib1","SARS-CoV-2","AAAGATAAATGGCCAA",4,64.6,8.42,-2.34,0.14,2.02,1.17,0.01,">1 nonsynonymous","G9T N107H",2
"lib1","SARS-CoV-2","AAAGATAACAAGTTGT",2,0,NA,NA,NA,NA,NA,NA,"stop","R16L V52Y I88F Y119A S129Y T201*",6
"lib1","SARS-CoV-2","AAAGATAACACAGCAA",12,276.52,10.8,0.04,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGATAAGAAATCAT",6,1.32,NA,NA,NA,NA,NA,NA,"stop","L5* F44H N171Y Q176*",4
"lib1","SARS-CoV-2","AAAGATAAGTCCAACA",1,17.89,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6V A14G W23S F44D K128E T148S E154M",7
"lib1","SARS-CoV-2","AAAGATAATCCAATTG",2,128.59,9.87,-0.89,0.11,1.87,1.09,0.01,">1 nonsynonymous","Y66E Y143T",2
"lib1","SARS-CoV-2","AAAGATAATGAAGTAA",4,12.87,7.36,-3.4,0.52,1.5,1.01,0.07,">1 nonsynonymous","D34S F44L Y50V L57K A89G G155W T201P",7
"lib1","SARS-CoV-2","AAAGATAATGCATTAA",1,6.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F A145S",2
"lib1","SARS-CoV-2","AAAGATAATGCCCCAT",4,87.17,10.16,-0.6,0.12,2.23,1.03,0.01,">1 nonsynonymous","N4V S43D R136W",3
"lib1","SARS-CoV-2","AAAGATAATGGTAAGG",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92E D137E",2
"lib1","SARS-CoV-2","AAAGATACAACAACAA",3,75.25,8.82,-1.95,0.06,2.9,1.07,0,">1 nonsynonymous","G9V N120P",2
"lib1","SARS-CoV-2","AAAGATACCTGGGAAA",2,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I V182A",2
"lib1","SARS-CoV-2","AAAGATACGATCCACA",4,118.57,9.72,-1.05,0.1,1.9,1.06,0,">1 nonsynonymous","F8Q V194L",2
"lib1","SARS-CoV-2","AAAGATACTATACAAA",4,21.41,10.27,-0.49,0.1,2.81,1,0,"1 nonsynonymous","G51T",1
"lib1","SARS-CoV-2","AAAGATACTATTAAAA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Q N107I Y159H",3
"lib1","SARS-CoV-2","AAAGATACTCGTAAAC",5,32.05,9.46,-1.31,0.14,2.3,1.01,0.01,">1 nonsynonymous","I2W K114H Y121A",3
"lib1","SARS-CoV-2","AAAGATACTCGTAATG",2,42.33,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C61A G172R",2
"lib1","SARS-CoV-2","AAAGATAGAATCTGGT",4,57.35,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F44S F99S Q144L T201L",4
"lib1","SARS-CoV-2","AAAGATAGAGATGTTG",1,17.27,10.65,-0.12,0.07,2.8,1.12,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","AAAGATAGAGTAGAGG",2,39.86,6.19,-4.58,0.77,1.5,1.1,0.02,">1 nonsynonymous","A89K F99M K199S",3
"lib1","SARS-CoV-2","AAAGATAGATGCTAAT",2,40.68,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","P7V K26W V71P Y119R G166K Y175C",6
"lib1","SARS-CoV-2","AAAGATAGTGGCCGTA",5,89.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Q84N R136T G152F T201V",4
"lib1","SARS-CoV-2","AAAGATAGTTACAGCA",3,13.72,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","I104T E135S Q168L V173W Q176P",5
"lib1","SARS-CoV-2","AAAGATAGTTACTTTG",3,17.94,6.29,-4.48,0.78,1.5,1.13,0.03,">1 nonsynonymous","F17E L60M F99P L122T S147T G152N",6
"lib1","SARS-CoV-2","AAAGATATATCATCAA",4,18.64,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A105D N118F F156Y",3
"lib1","SARS-CoV-2","AAAGATATTGCACACT",1,63.29,10.81,0.04,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGATCAAAATAAAT",5,50.49,6.01,-4.75,1.5,1.5,1.17,0.03,">1 nonsynonymous","S43T R124Y",2
"lib1","SARS-CoV-2","AAAGATCAATATTTGA",6,1.63,NA,NA,NA,NA,NA,NA,"stop","Y91* D97R T148S P161T",4
"lib1","SARS-CoV-2","AAAGATCAATCGGCAC",1,94,10.72,-0.05,0.05,2.91,1.06,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","AAAGATCATAAAAAAT",1,101.89,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y121E Q176V",2
"lib1","SARS-CoV-2","AAAGATCATCTCCATA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R P169R",2
"lib1","SARS-CoV-2","AAAGATCATGATAAGG",9,58.34,8.06,-2.7,0.18,1.78,1.18,0.01,">1 nonsynonymous","W106K G155P",2
"lib1","SARS-CoV-2","AAAGATCTACTCAGAT",2,48.26,10.74,-0.02,0.07,2.92,1.03,0,"1 nonsynonymous","L111W",1
"lib1","SARS-CoV-2","AAAGATCTAGCGCACA",8,53.07,7.66,-3.11,0.26,1.56,1.2,0.02,">1 nonsynonymous","T3M K87D R136T",3
"lib1","SARS-CoV-2","AAAGATCTTACAGAAA",1,15.65,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L60I Y159N V182F",3
"lib1","SARS-CoV-2","AAAGATCTTGAACTAA",4,111,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T46L L122N P161R Q176G L188S",5
"lib1","SARS-CoV-2","AAAGATGAAGAAAGAA",13,122.95,6.16,-4.61,0.93,1.5,1.27,0.03,">1 nonsynonymous","Y66T A89L T201R",3
"lib1","SARS-CoV-2","AAAGATGAAGTAAACA",2,24.02,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28K T46S L57M K94L P149S",5
"lib1","SARS-CoV-2","AAAGATGAATAAGTAT",5,28.37,9.96,-0.81,0.1,2.57,1.06,0,">1 nonsynonymous","V11W S184Q",2
"lib1","SARS-CoV-2","AAAGATGAATACGAAA",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I L60F I104V I142K P161I F167V",6
"lib1","SARS-CoV-2","AAAGATGACATACTCC",3,15.41,9.99,-0.78,0.1,1.7,1.06,0.01,">1 nonsynonymous","S53L L60H Y93F K114R",4
"lib1","SARS-CoV-2","AAAGATGACTACACTA",1,30.02,8.9,-1.87,0.28,1.5,1.07,0.04,">1 nonsynonymous","Y35C T85R I104G",3
"lib1","SARS-CoV-2","AAAGATGACTTCTGAG",3,70.43,10.48,-0.29,0.05,2.93,1.01,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","AAAGATGAGCTGGCTA",4,71.09,10.77,0,0.09,2.9,1.04,0,"1 nonsynonymous","G152K",1
"lib1","SARS-CoV-2","AAAGATGCCAATAGTA",4,19.95,6.09,-4.67,0.99,1.5,1.2,0.03,">1 nonsynonymous","F44N G83V C102D",3
"lib1","SARS-CoV-2","AAAGATGGAATACCAG",7,99.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y W23D",2
"lib1","SARS-CoV-2","AAAGATGGTCTCACGA",7,229.92,10.17,-0.59,0.04,2.83,1.02,0,">1 nonsynonymous","T46D D90K",2
"lib1","SARS-CoV-2","AAAGATGGTGCGACAC",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N24Y G83D D97C N107R",5
"lib1","SARS-CoV-2","AAAGATGTAAAGAGTG",16,103.39,6,-4.76,0.94,1.5,1.12,0.01,">1 nonsynonymous","A89V Y91T W106D S184M",4
"lib1","SARS-CoV-2","AAAGATTAACCAGATG",3,34.92,10.65,-0.12,0.08,2.92,1.04,0,">1 nonsynonymous","L5Q F160A",2
"lib1","SARS-CoV-2","AAAGATTAAGTTTATG",5,37.35,8.78,-1.98,0.13,2.4,1.07,0.01,">1 nonsynonymous","S43L T85W Y91F S113C",4
"lib1","SARS-CoV-2","AAAGATTACGGAGTGT",5,108.41,9.7,-1.07,0.08,2.6,1.07,0,">1 nonsynonymous","N40R Y121S",2
"lib1","SARS-CoV-2","AAAGATTAGGGCACAC",4,34.45,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A105S R127V I142C V180I",4
"lib1","SARS-CoV-2","AAAGATTATAAGCCGC",1,42.82,8.99,-1.78,0.13,2.15,1.14,0.01,">1 nonsynonymous","C6R K87I K94A",3
"lib1","SARS-CoV-2","AAAGATTCAAGGAGTA",6,32.56,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K56D V71W F99L",3
"lib1","SARS-CoV-2","AAAGATTCAATAAATA",4,10.33,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","C49P Y91C S113T D137G",4
"lib1","SARS-CoV-2","AAAGATTCCAATGGAA",1,9.89,10.77,0.01,0.11,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGATTGAACGAGCC",2,56.87,10.69,-0.07,0.06,2.92,1.04,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","AAAGATTGCACACATC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","T85S D97* L122S N151L",4
"lib1","SARS-CoV-2","AAAGATTGTTAACCAT",2,9.82,10.5,-0.26,0.04,3,1,0,">1 nonsynonymous","G9T R16A",2
"lib1","SARS-CoV-2","AAAGATTTACACCTCA",10,2.58,NA,NA,NA,NA,NA,NA,"stop","I2R D34* K48D T63H Y175L",5
"lib1","SARS-CoV-2","AAAGATTTAGAAGATA",9,169.14,8.59,-2.18,0.1,2.43,1.08,0,"1 nonsynonymous","R73D",1
"lib1","SARS-CoV-2","AAAGATTTGTTGCACA",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N T148L V173S",3
"lib1","SARS-CoV-2","AAAGATTTTTATAAAC",3,22.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49F L60M A105R S147Y",4
"lib1","SARS-CoV-2","AAAGCAAAAAACAAAC",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S G196V",2
"lib1","SARS-CoV-2","AAAGCAAAACCTAATA",1,33.74,10.84,0.07,0.08,2.94,1.02,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","AAAGCAAAAGAAAGTG",1,41.94,10.18,-0.58,0.06,2.75,1.05,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","AAAGCAAAATTACCCA",6,2.41,NA,NA,NA,NA,NA,NA,"stop","T46I P96Y Y143G K198*",4
"lib1","SARS-CoV-2","AAAGCAAAGTCGTCAT",7,124.78,10.11,-0.65,0.05,2.81,1.06,0,">1 nonsynonymous","F8V A42S",2
"lib1","SARS-CoV-2","AAAGCAAATCCACCGG",2,54.83,10.83,0.07,0.09,2.89,1.06,0,">1 nonsynonymous","F99W F160Y N171W",3
"lib1","SARS-CoV-2","AAAGCAAATGTCGACG",3,47.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y119H C150L Y178G",3
"lib1","SARS-CoV-2","AAAGCAACCCTCGCAG",9,139.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S S45L F99W L122A",4
"lib1","SARS-CoV-2","AAAGCAACGATATCGT",10,131.05,10.09,-0.67,0.07,2.65,1.03,0,">1 nonsynonymous","P7L D59F",2
"lib1","SARS-CoV-2","AAAGCAACGTATGAAC",10,166.34,9.26,-1.5,0.08,2.76,1.1,0,">1 nonsynonymous","P7Y R78M F156M",3
"lib1","SARS-CoV-2","AAAGCAACTAACAGAA",1,44.05,10.04,-0.72,0.07,2.92,1,0,">1 nonsynonymous","G83Y Y159W T201I",3
"lib1","SARS-CoV-2","AAAGCAACTGGGCCGC",2,10.49,10.75,-0.01,0.1,2.77,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAGCAAGAACTCCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5H T15* S36G Q79S D137T G146D",6
"lib1","SARS-CoV-2","AAAGCAATAAACTACA",1,18.03,10.64,-0.12,0.27,2.18,1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AAAGCAATACCCTAGT",2,108.14,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","R25E N92L V173G",3
"lib1","SARS-CoV-2","AAAGCAATTCCTAATG",1,24.54,6.19,-4.57,0.81,1.5,1.14,0.03,">1 nonsynonymous","I2H K114S Y165G",3
"lib1","SARS-CoV-2","AAAGCAATTTACAACT",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35H A89N V103I",3
"lib1","SARS-CoV-2","AAAGCACACAATGAAC",2,73.59,10.81,0.04,0.07,2.8,1.1,0,">1 nonsynonymous","S36T Q163T",2
"lib1","SARS-CoV-2","AAAGCACAGAAATTGA",4,124.92,9.13,-1.64,0.07,2.79,1.12,0,"1 nonsynonymous","N157A",1
"lib1","SARS-CoV-2","AAAGCACAGCAGGGCC",5,6.85,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","AAAGCACCAAATCAAA",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L V52I P82I D98F G116S T201Q",6
"lib1","SARS-CoV-2","AAAGCACCCAAACTCC",1,18.43,9.78,-0.99,0.12,2.42,1.13,0.01,">1 nonsynonymous","K26L I88V Y143H",3
"lib1","SARS-CoV-2","AAAGCACTCAGGTGAG",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L V77R T85P F99Q R127S",5
"lib1","SARS-CoV-2","AAAGCACTCGCAAACA",3,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P A89L",2
"lib1","SARS-CoV-2","AAAGCACTCTAACGTT",3,85.78,8.35,-2.42,0.24,1.5,1.06,0.02,">1 nonsynonymous","S36D S69E G83H",3
"lib1","SARS-CoV-2","AAAGCACTGAAAATAA",4,75.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y39V D75G N118S Q176K",4
"lib1","SARS-CoV-2","AAAGCACTGCCCTCGT",1,105.4,8.92,-1.85,0.06,2.56,1.14,0,">1 nonsynonymous","S41Q S113T N120S T140Q P149K",5
"lib1","SARS-CoV-2","AAAGCACTGTATCATC",2,0,NA,NA,NA,NA,NA,NA,"stop","W23L Y39I L60* T85D",4
"lib1","SARS-CoV-2","AAAGCACTTGGTTCAT",1,11.97,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G51T N64I G117M I142W",4
"lib1","SARS-CoV-2","AAAGCAGAATTAAGGC",2,72.36,8.71,-2.05,0.12,1.88,1.12,0.01,">1 nonsynonymous","V37L W106S Y119R",3
"lib1","SARS-CoV-2","AAAGCAGCATTAAAAC",5,23.26,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V71Y E154G L162Y",3
"lib1","SARS-CoV-2","AAAGCAGCTATTTAGG",1,42.33,10.74,-0.02,0.04,2.99,1,0,">1 nonsynonymous","K132R T201Y",2
"lib1","SARS-CoV-2","AAAGCAGTAACAAAGC",3,54.5,10.11,-0.65,0.06,2.94,1,0,">1 nonsynonymous","N130T E154L",2
"lib1","SARS-CoV-2","AAAGCAGTTCGAGAAA",1,70.21,10.71,-0.05,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGCATAAACTTAAC",7,73.52,6.29,-4.48,0.3,1.5,1.2,0.01,">1 nonsynonymous","V20L I28K N171T",3
"lib1","SARS-CoV-2","AAAGCATAATGATTGA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","G51R A81V L122S Q168*",4
"lib1","SARS-CoV-2","AAAGCATAGCTGACAC",2,2.49,NA,NA,NA,NA,NA,NA,"stop","A22V A89W Y178*",3
"lib1","SARS-CoV-2","AAAGCATATTAGTTTG",2,15.88,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","F17W L60R N92Y N120L",4
"lib1","SARS-CoV-2","AAAGCATCATAAAATT",2,39.05,6.03,-4.73,0.93,1.5,1.1,0.02,">1 nonsynonymous","G9L D112A",2
"lib1","SARS-CoV-2","AAAGCATCGGCCGTAC",3,87.34,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R27M Y93V W106D G155W",4
"lib1","SARS-CoV-2","AAAGCATGAACATGAA",12,113.34,8.38,-2.39,0.13,2.22,1.11,0.01,">1 nonsynonymous","D97G G117M P133A",3
"lib1","SARS-CoV-2","AAAGCATGGTCCCAAC",6,84.27,10.23,-0.53,0.06,2.81,1.04,0,">1 nonsynonymous","T46M A89C K128H",3
"lib1","SARS-CoV-2","AAAGCATGTAAACGTA",2,29.96,8.61,-2.15,0.44,1.5,1,0.07,">1 nonsynonymous","Y50W I80Q F99Y K128L P197K",5
"lib1","SARS-CoV-2","AAAGCATGTGCCAACA",1,15.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86K P149S L183C",3
"lib1","SARS-CoV-2","AAAGCATTACGGCTAA",1,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71S L122T P149M",3
"lib1","SARS-CoV-2","AAAGCATTGAATGATA",7,115.21,10.75,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGCCAAACATCTTT",7,3.6,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAAGCCAATAAGGTCT",4,30.77,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","V37E C49V A81L",3
"lib1","SARS-CoV-2","AAAGCCACAGCATATT",4,35.26,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C6A K48Q D59G K114T R124Q G152Y F156W",7
"lib1","SARS-CoV-2","AAAGCCAGAAAAAGAG",3,11.58,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","F44W K56L N64K S139P C150S",5
"lib1","SARS-CoV-2","AAAGCCAGATGGGAAT",8,119.91,10.1,-0.67,0.06,2.84,1.04,0,">1 nonsynonymous","K26R T100Y I142K",3
"lib1","SARS-CoV-2","AAAGCCAGGACTTGAT",2,27.57,7.85,-2.92,0.32,1.5,1.14,0.03,">1 nonsynonymous","L38S S45Y K132N",3
"lib1","SARS-CoV-2","AAAGCCAGGCGAATAA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","S19* D34L C61N R136L E154R Y165G",6
"lib1","SARS-CoV-2","AAAGCCAGTTTAAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","F12V S45* K87M N118* P197V",5
"lib1","SARS-CoV-2","AAAGCCATAAAAGTTT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N13F T100M W106*",3
"lib1","SARS-CoV-2","AAAGCCATAGCTTCTA",4,21.19,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y50V A81E K114S V153W",4
"lib1","SARS-CoV-2","AAAGCCATGTGAACCT",1,27.13,10.05,-0.72,0.07,2.96,1.05,0,">1 nonsynonymous","S53I K87N S184Q",3
"lib1","SARS-CoV-2","AAAGCCCAAGATGCAA",2,11.82,6.21,-4.56,0.74,1.5,1.1,0.01,">1 nonsynonymous","I2Y A89W P96A L122R F156L T201N",6
"lib1","SARS-CoV-2","AAAGCCCAATTGCTCA",8,67.46,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R25L Y91L N107L D112M K128L F167I",6
"lib1","SARS-CoV-2","AAAGCCCACAGAGACA",15,177.49,9.85,-0.91,0.06,2.87,1.04,0,">1 nonsynonymous","Y121F P169V T201I",3
"lib1","SARS-CoV-2","AAAGCCCACATCTACT",6,62.29,10.42,-0.35,0.04,2.91,1.06,0,">1 nonsynonymous","V37S K48S N151C",3
"lib1","SARS-CoV-2","AAAGCCCATTTTAGAA",4,110.56,10.64,-0.13,0.05,2.89,1,0,">1 nonsynonymous","F44L H189K",2
"lib1","SARS-CoV-2","AAAGCCCCAAGCTAGT",6,51.82,6,-4.76,0.46,2.31,1.12,0,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","AAAGCCCCGAAATGGA",10,61.4,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25L N92K D137V",3
"lib1","SARS-CoV-2","AAAGCCCCGGCTAAAC",1,30.45,9.02,-1.74,0.12,2.34,1.11,0,">1 nonsynonymous","D112L V173M",2
"lib1","SARS-CoV-2","AAAGCCCGCATACAAA",2,86.42,10.68,-0.08,0.08,2.87,1.06,0,"1 nonsynonymous","R27M",1
"lib1","SARS-CoV-2","AAAGCCCGCCAGATGC",4,37.91,6,-4.76,2,1.73,1.22,0.02,">1 nonsynonymous","I88G E141L G152C P169R",4
"lib1","SARS-CoV-2","AAAGCCCGGGCGATAT",4,17.87,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y21M C31Y Y66S S147L",4
"lib1","SARS-CoV-2","AAAGCCCTAGCACAAT",3,26.21,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N92T C158S T170S S200Q",4
"lib1","SARS-CoV-2","AAAGCCGAAATCATTA",3,11.37,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N24F Y66C K87V S113W",4
"lib1","SARS-CoV-2","AAAGCCGACGAAAACA",2,6.96,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N4A D34H K114P R124S E141T",5
"lib1","SARS-CoV-2","AAAGCCGAGACCTGAA",11,145.4,9.88,-0.88,0.07,2.8,1.05,0,">1 nonsynonymous","R16G T170M",2
"lib1","SARS-CoV-2","AAAGCCGATCAAGGAC",2,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I L57M V77Q A81S F126N",5
"lib1","SARS-CoV-2","AAAGCCGATTAACTAT",1,21.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140Q Q163V",2
"lib1","SARS-CoV-2","AAAGCCGCGAATTGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","V52C V77* R127D",3
"lib1","SARS-CoV-2","AAAGCCGGATTCACAA",3,18.4,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F62S D98V Q144H E154S N171R T201V",6
"lib1","SARS-CoV-2","AAAGCCGGCCTCCATT",1,29.78,9.75,-1.02,0.08,2.96,1.03,0,">1 nonsynonymous","C61I L122S Y143V T201H",4
"lib1","SARS-CoV-2","AAAGCCGGTGCCGGCG",9,111.35,10.76,0,0.05,2.91,1.06,0,">1 nonsynonymous","N1Q G51R F62W T201S",4
"lib1","SARS-CoV-2","AAAGCCGTTCAATGGT",2,1.08,NA,NA,NA,NA,NA,NA,"stop","C61H S69G K87* S113K Y143F C158T K198N",7
"lib1","SARS-CoV-2","AAAGCCTAAAGTGAAT",5,19.63,6.66,-4.1,0.81,1.5,1.2,0.07,">1 nonsynonymous","T15I P82M Y93Q G152C",4
"lib1","SARS-CoV-2","AAAGCCTAAATTGCAA",10,0.58,NA,NA,NA,NA,NA,NA,"stop","A89K F156D K198*",3
"lib1","SARS-CoV-2","AAAGCCTACTAAGGTC",5,105.42,10.85,0.09,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGCCTAGAGAGAGC",4,65.71,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S45P C61Y V103A Y175F",4
"lib1","SARS-CoV-2","AAAGCCTAGATCAGTA",3,10.44,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","Y50F R73S D98P Q144F",4
"lib1","SARS-CoV-2","AAAGCCTATACAGTCG",3,61.65,10.31,-0.45,0.05,2.94,1.01,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","AAAGCCTATAGAAGTT",3,1.2,NA,NA,NA,NA,NA,NA,"stop","G9R C49W T63V I88* W106A G117I S139N G146H G152T Q176E",10
"lib1","SARS-CoV-2","AAAGCCTATTACAACA",5,52.8,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12Y S29M F44S T63N Y121V Y123S P133F N151K S200L",9
"lib1","SARS-CoV-2","AAAGCCTCAGAACTGA",5,14.52,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V65E T100S S113P N171L",4
"lib1","SARS-CoV-2","AAAGCCTCCGTGACGA",1,23.23,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","V103E N118V R124H",3
"lib1","SARS-CoV-2","AAAGCCTGATCAAAGG",5,30.31,10.37,-0.39,0.17,2.69,1.1,0.01,">1 nonsynonymous","D90V P197R",2
"lib1","SARS-CoV-2","AAAGCCTTAAATATTC",4,56.04,10.32,-0.44,0.03,2.88,1.02,0,">1 nonsynonymous","T3P S45N Y66L",3
"lib1","SARS-CoV-2","AAAGCCTTAAGACTAA",3,51.99,10.79,0.03,0.08,2.9,1.04,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","AAAGCCTTCCTGTGCA",8,51.12,7.74,-3.02,0.25,1.5,1.11,0.03,">1 nonsynonymous","Y35C V65R P149A",3
"lib1","SARS-CoV-2","AAAGCCTTGAAAGCCT",5,17.04,7.47,-3.3,0.49,1.5,1.06,0.08,">1 nonsynonymous","V77E D90Y K128N",3
"lib1","SARS-CoV-2","AAAGCCTTTAAAGCGG",3,871.96,10.78,0.01,0.06,2.9,1.07,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","AAAGCGAAACATCTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V K94N I104M F156*",4
"lib1","SARS-CoV-2","AAAGCGAACAATATTA",3,38.67,10.71,-0.06,0.05,2.95,1.04,0,">1 nonsynonymous","L5H R27M",2
"lib1","SARS-CoV-2","AAAGCGAACGCAGAAA",11,331.87,10.24,-0.52,0.03,2.85,1.02,0,">1 nonsynonymous","F62R K198W",2
"lib1","SARS-CoV-2","AAAGCGAACGGAGAAA",3,29.45,10.33,-0.43,0.07,2.78,1.14,0,">1 nonsynonymous","A42F E135T",2
"lib1","SARS-CoV-2","AAAGCGAAGCCTATAA",6,168.01,10.66,-0.11,0.06,2.93,1.05,0,">1 nonsynonymous","S36A R78G",2
"lib1","SARS-CoV-2","AAAGCGAGAAACCATT",1,20.89,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","V20C P82H Y165M",3
"lib1","SARS-CoV-2","AAAGCGAGACATCCCA",15,6.24,NA,NA,NA,NA,NA,NA,"stop","V11A D59* G86R N110L",4
"lib1","SARS-CoV-2","AAAGCGAGACGGCGAA",1,2.51,NA,NA,NA,NA,NA,NA,"stop","A33C D68T Y91P N107* G116Y E141Y P149E P197H",8
"lib1","SARS-CoV-2","AAAGCGAGGTGGCGCA",3,14.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3M N157D N171Y R179I",4
"lib1","SARS-CoV-2","AAAGCGATCAACAACA",5,23.47,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","N13S S41P Y50G",3
"lib1","SARS-CoV-2","AAAGCGATCCATCATA",4,116.25,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86K N107S",2
"lib1","SARS-CoV-2","AAAGCGCAATTTAATG",1,0.35,NA,NA,NA,NA,NA,NA,"stop","P7F G116* Y143I",3
"lib1","SARS-CoV-2","AAAGCGCAGTAAACAG",1,36.8,10.55,-0.22,0.09,2.8,1.03,0,">1 nonsynonymous","L5D P169S",2
"lib1","SARS-CoV-2","AAAGCGCAGTCAAACG",13,197.99,7.37,-3.4,0.22,1.5,1.15,0.01,">1 nonsynonymous","G117P S147T Q168G P177S",4
"lib1","SARS-CoV-2","AAAGCGCATTAGCCTA",5,123.03,10.19,-0.57,0.05,2.74,1,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","AAAGCGCCCTACCTTG",3,19.32,8.04,-2.73,0.31,1.5,1.07,0.03,">1 nonsynonymous","A14R V20T K128R K198L",4
"lib1","SARS-CoV-2","AAAGCGCGGACATGAT",4,113.37,6,-4.76,0.88,1.5,1.15,0.01,"1 nonsynonymous","P177M",1
"lib1","SARS-CoV-2","AAAGCGGTCACTTGAC",5,0.53,NA,NA,NA,NA,NA,NA,"stop","C6L T15* A33S A42Y F62R Y66* S69E P96T E135L G146I",10
"lib1","SARS-CoV-2","AAAGCGGTGCTAGGAT",3,72.11,10.22,-0.54,0.07,2.74,1.02,0,">1 nonsynonymous","K48Y H189L",2
"lib1","SARS-CoV-2","AAAGCGGTGTGTGCGG",7,47.81,6.17,-4.59,0.53,1.5,1.13,0.01,">1 nonsynonymous","L57S G86D T100Y S184L",4
"lib1","SARS-CoV-2","AAAGCGGTTTTTGAGA",7,67.14,10.53,-0.23,0.06,2.87,1.01,0,">1 nonsynonymous","Y91L D97V K128S",3
"lib1","SARS-CoV-2","AAAGCGTATAAGAAGC",2,6.39,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","C49F A145S C158R F167V L183Q",5
"lib1","SARS-CoV-2","AAAGCGTATCCCTGAA",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N K94Y Q163T",3
"lib1","SARS-CoV-2","AAAGCGTATTAATCTT",11,189.57,10.7,-0.07,0.04,2.93,1.04,0,">1 nonsynonymous","T140C E154R",2
"lib1","SARS-CoV-2","AAAGCGTCAATAGTCG",4,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K L131P Y165N",3
"lib1","SARS-CoV-2","AAAGCGTCGCACAGCC",4,12.57,6.3,-4.47,0.41,1.99,1.22,0.01,">1 nonsynonymous","K48S I104E",2
"lib1","SARS-CoV-2","AAAGCGTGTCTCTACT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","T63G L122* K128P",3
"lib1","SARS-CoV-2","AAAGCTAAAAGAAAAA",6,13.16,6.35,-4.42,1,1.5,1.2,0.07,">1 nonsynonymous","L5R N58V V103S K128R P169F",5
"lib1","SARS-CoV-2","AAAGCTAAATCACAAG",3,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y G74V W106Y G174S R179W",5
"lib1","SARS-CoV-2","AAAGCTAACGTCCACC",5,115.25,9.6,-1.17,0.1,2.3,1.07,0,">1 nonsynonymous","L5E K56Y N107R V173M",4
"lib1","SARS-CoV-2","AAAGCTAAGGACGCAT",3,13.7,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","R25I C49R",2
"lib1","SARS-CoV-2","AAAGCTAATAGTAAAT",2,16.62,8.71,-2.05,0.28,1.64,1.37,0.02,">1 nonsynonymous","A42L P82K",2
"lib1","SARS-CoV-2","AAAGCTAATATTGAGG",7,0.71,NA,NA,NA,NA,NA,NA,"stop","A33V N40D F70*",3
"lib1","SARS-CoV-2","AAAGCTAATCAATCTT",16,211.04,8.12,-2.65,0.19,1.67,1.14,0.01,">1 nonsynonymous","C61Y G146I",2
"lib1","SARS-CoV-2","AAAGCTAATTAGGAAA",2,14.21,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L60F G101L C150S",3
"lib1","SARS-CoV-2","AAAGCTAATTGTAAGG",6,83.49,7.39,-3.38,0.28,1.5,1.19,0.02,">1 nonsynonymous","F17V Q176S",2
"lib1","SARS-CoV-2","AAAGCTAATTTACAGC",2,22.69,9.93,-0.84,0.14,2.09,1,0.01,">1 nonsynonymous","N130S F185Q",2
"lib1","SARS-CoV-2","AAAGCTACAGAAAGGG",7,0.59,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","AAAGCTACAGTACTTA",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I G86I",2
"lib1","SARS-CoV-2","AAAGCTACTGTCAAAC",1,19.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H A105W E135G N171G",4
"lib1","SARS-CoV-2","AAAGCTAGACCAAAAA",1,56.04,6,-4.76,2,3,1.18,0,"1 nonsynonymous","F70K",1
"lib1","SARS-CoV-2","AAAGCTAGGAACTACT",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G I88R V181A",3
"lib1","SARS-CoV-2","AAAGCTATACTTTACA",2,31.87,10.11,-0.65,0.06,2.71,1,0,">1 nonsynonymous","T15S V37R T55G E135K",4
"lib1","SARS-CoV-2","AAAGCTATTCAAAACT",13,130.67,10.7,-0.06,0.06,2.89,1.04,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","AAAGCTATTGCTTGTT",3,21.77,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D59S G86I",2
"lib1","SARS-CoV-2","AAAGCTCAAATTATTC",1,39.97,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C31F E141V V181D",3
"lib1","SARS-CoV-2","AAAGCTCACGTAAGAT",2,25.78,6,-4.76,2,3,1.22,0,">1 nonsynonymous","R25L I72F T100I N107C",4
"lib1","SARS-CoV-2","AAAGCTCATAAGAAAT",4,54.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y50A V77L V115W L162M Q163K H189C",6
"lib1","SARS-CoV-2","AAAGCTCGTATCTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S T46S P54L C61F",4
"lib1","SARS-CoV-2","AAAGCTCTACAACGGC",1,9.13,10.05,-0.72,0.12,2.18,1,0,"1 nonsynonymous","F47N",1
"lib1","SARS-CoV-2","AAAGCTCTATTTAATG",6,87.83,10.74,-0.03,0.06,2.87,1.05,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","AAAGCTCTGGATACGT",1,9.02,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","K56I Y178P",2
"lib1","SARS-CoV-2","AAAGCTGCCATAATAA",6,48.82,10.2,-0.57,0.12,2.48,1.06,0.01,">1 nonsynonymous","S45Y D90R E154S",3
"lib1","SARS-CoV-2","AAAGCTGCGCCCCGGG",6,40.85,9.9,-0.86,0.12,2.03,1.11,0.01,">1 nonsynonymous","P54G Q144L",2
"lib1","SARS-CoV-2","AAAGCTGGGGTCCAAC",1,31.57,10.09,-0.67,0.05,2.9,1.03,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","AAAGCTGTCCTTGTTC",3,65.1,9.91,-0.85,0.04,2.87,1.07,0,"1 nonsynonymous","Y119K",1
"lib1","SARS-CoV-2","AAAGCTTAAAGAATTG",2,8.46,6,-4.76,2,3,1.05,0,">1 nonsynonymous","Y35D K128L R179T",3
"lib1","SARS-CoV-2","AAAGCTTAAAGTGCAT",2,28.86,10.83,0.06,0.06,2.93,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAGCTTAGATAAACG",2,10.09,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","C6G T55S D68L V77Q K87V",5
"lib1","SARS-CoV-2","AAAGCTTAGCTCCAAT",6,24.96,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","I2N F17A W23V C61R N171I G196R",6
"lib1","SARS-CoV-2","AAAGCTTATAAAACCG",6,56.81,10.3,-0.46,0.08,2.85,1,0,"1 nonsynonymous","E135R",1
"lib1","SARS-CoV-2","AAAGCTTATGGATCAA",9,1.42,NA,NA,NA,NA,NA,NA,"stop","C31* A105P S129A",3
"lib1","SARS-CoV-2","AAAGCTTCTAGATACA",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K K132Q",2
"lib1","SARS-CoV-2","AAAGCTTGCTCGCAAT",4,6.29,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","T3Y N107L Q163S F185R",4
"lib1","SARS-CoV-2","AAAGCTTGTGACGGCT",2,14.75,6.87,-3.9,0.38,1.5,1.02,0.03,">1 nonsynonymous","F44S Y66L I72E A105W Q168T",5
"lib1","SARS-CoV-2","AAAGGAAAACATCAAA",1,18.89,10.85,0.08,0.11,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGAAAACCGAATT",3,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P G117M G155V",3
"lib1","SARS-CoV-2","AAAGGAAAAGTCGAGC",3,9.82,6.04,-4.73,1.7,1.5,1.14,0.03,">1 nonsynonymous","A33T A89C A105I",3
"lib1","SARS-CoV-2","AAAGGAAAATCCCAAA",23,314.79,9.67,-1.1,0.13,1.7,1.1,0.01,">1 nonsynonymous","L60R I142L Q163P",3
"lib1","SARS-CoV-2","AAAGGAAACACGCAAT",2,56.95,10.13,-0.64,0.12,1.95,1.01,0.01,">1 nonsynonymous","R27T F62D G83S T140S",4
"lib1","SARS-CoV-2","AAAGGAAACTAATGAC",1,5.96,10.87,0.11,0.16,2.93,1,0.01,"1 nonsynonymous","S184I",1
"lib1","SARS-CoV-2","AAAGGAAAGTCGAATT",3,70.23,6.82,-3.95,0.26,1.59,1.18,0.01,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","AAAGGAAATATAAATG",1,36.36,10.26,-0.51,0.07,2.92,1,0,">1 nonsynonymous","R16S A67V F134L",3
"lib1","SARS-CoV-2","AAAGGAACAAAAATGA",2,25.57,6.61,-4.16,0.49,1.5,1.18,0.02,">1 nonsynonymous","T15N T85N Y165S",3
"lib1","SARS-CoV-2","AAAGGAACAACCCATG",5,20,10.74,-0.02,0.06,2.82,1.1,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","AAAGGAACACAATCCC",5,65.81,10.23,-0.54,0.1,2.54,1,0,">1 nonsynonymous","P96S Y178F E186T",3
"lib1","SARS-CoV-2","AAAGGAACTTACTATC",1,16.12,10.38,-0.38,0.11,2.78,1.09,0.01,">1 nonsynonymous","A42F K199W",2
"lib1","SARS-CoV-2","AAAGGAAGACGGTGAT",1,38.08,10.61,-0.16,0.09,2.83,1.15,0,"1 nonsynonymous","S43V",1
"lib1","SARS-CoV-2","AAAGGAAGATAGAATA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","F12* S113F G196W",3
"lib1","SARS-CoV-2","AAAGGAAGGCATTAAA",11,217.77,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49V I80L",2
"lib1","SARS-CoV-2","AAAGGAAGGCGTTCAA",10,2.9,NA,NA,NA,NA,NA,NA,"stop","S41N Y66G L95*",3
"lib1","SARS-CoV-2","AAAGGAATAACAAACA",8,42.82,10.75,-0.02,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGAATAGCGTATT",5,39.48,8.31,-2.46,0.1,1.72,1.06,0,">1 nonsynonymous","F12L S43Y Y66M T170P A190S",5
"lib1","SARS-CoV-2","AAAGGAATTATTACCC",1,8.44,10.37,-0.4,0.18,2.08,1,0.02,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","AAAGGACAACCAAAAA",3,65.24,10.1,-0.67,0.05,2.87,1,0,">1 nonsynonymous","G116A G155M",2
"lib1","SARS-CoV-2","AAAGGACACAATCAAA",1,13.7,6,-4.76,0.64,3,1.1,0.01,">1 nonsynonymous","P7L W23R N58C Y119G",4
"lib1","SARS-CoV-2","AAAGGACACCCACATT",8,61.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12S C49R N107P D137H",4
"lib1","SARS-CoV-2","AAAGGACAGAACTTAC",2,108.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F99G P133L G146C",3
"lib1","SARS-CoV-2","AAAGGACAGTAAACCT",3,24.95,6,-4.76,1.4,1.5,1.13,0.01,">1 nonsynonymous","D90K C150I P161H T170K",4
"lib1","SARS-CoV-2","AAAGGACGGAGAATAG",2,32.08,10.92,0.16,0.08,2.88,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGACTAAATACAT",6,46.42,10.65,-0.11,0.08,2.95,1.06,0,"1 nonsynonymous","L187E",1
"lib1","SARS-CoV-2","AAAGGACTAGAAATTA",6,1.13,NA,NA,NA,NA,NA,NA,"stop","W106Y Y119* R124Q N157T",4
"lib1","SARS-CoV-2","AAAGGACTCAAGAACC",3,87.89,9.74,-1.02,0.1,2.46,1.06,0,">1 nonsynonymous","T15Y A22M Q163R",3
"lib1","SARS-CoV-2","AAAGGACTCGACAGGA",5,35.87,9.33,-1.43,0.4,1.5,1,0.07,">1 nonsynonymous","T55C P82F V180E",3
"lib1","SARS-CoV-2","AAAGGACTGTCGACAG",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R Y121K P133H C158S",4
"lib1","SARS-CoV-2","AAAGGACTTGAGCGAA",5,19.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N F167Q Y175T",3
"lib1","SARS-CoV-2","AAAGGAGAAAAACCTT",3,1.55,NA,NA,NA,NA,NA,NA,"stop","V103* K114N K132I",3
"lib1","SARS-CoV-2","AAAGGAGAAGAATCCC",1,22.37,8.03,-2.73,0.24,1.75,1.12,0.03,">1 nonsynonymous","A22G V37S Y143A",3
"lib1","SARS-CoV-2","AAAGGAGAATAAAGAT",5,83.98,6.81,-3.96,0.16,1.5,1.1,0,">1 nonsynonymous","K128R C158E",2
"lib1","SARS-CoV-2","AAAGGAGATTATCTAG",2,0.17,NA,NA,NA,NA,NA,NA,"stop","C6S G86* S113F N151F",4
"lib1","SARS-CoV-2","AAAGGAGGAGCGATAT",1,0.59,NA,NA,NA,NA,NA,NA,"stop","C61* T201M",2
"lib1","SARS-CoV-2","AAAGGAGTACAGCTGC",2,47.67,10.74,-0.02,0.08,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AAAGGAGTTATTGTCA",1,9.87,9.73,-1.03,0.05,2.93,1.03,0,">1 nonsynonymous","N30R S41V F156R",3
"lib1","SARS-CoV-2","AAAGGATAAACACTTG",2,11.71,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y21W N40Y G51C F62N N120E",5
"lib1","SARS-CoV-2","AAAGGATACAAGCCCT",2,8.82,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","K48V I88T K128N S139R P161M",5
"lib1","SARS-CoV-2","AAAGGATACAGAGGAT",3,19.19,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","D59Y D98N A105R N120L Y123F E135V",6
"lib1","SARS-CoV-2","AAAGGATACTAACCCC",4,51.28,6.01,-4.76,0.93,1.5,1.21,0.01,">1 nonsynonymous","Y35M K56S G83C A105T C158W",5
"lib1","SARS-CoV-2","AAAGGATACTCTAGTA",5,47.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6D C61Q E76G G83D R127K G146M",6
"lib1","SARS-CoV-2","AAAGGATATAACCGTG",1,5.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","AAAGGATGCACATCAT",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92I F99G",2
"lib1","SARS-CoV-2","AAAGGATTTATCGAAA",2,9.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91S E141V E186Y",3
"lib1","SARS-CoV-2","AAAGGCAAAAATAAGT",5,125.1,10.6,-0.17,0.05,2.93,1.03,0,"1 nonsynonymous","T63F",1
"lib1","SARS-CoV-2","AAAGGCAAAATATTAA",1,22.85,10.8,0.04,0.09,2.91,1,0,">1 nonsynonymous","S43R K48Q N64R",3
"lib1","SARS-CoV-2","AAAGGCAATACCACCA",4,24.37,6.32,-4.45,0.54,1.5,1.12,0.02,">1 nonsynonymous","V77T G83V V115I E141S",4
"lib1","SARS-CoV-2","AAAGGCAATCACTCGT",2,32.25,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C61V L131P",2
"lib1","SARS-CoV-2","AAAGGCACGATTATGT",3,1.46,NA,NA,NA,NA,NA,NA,"stop","N1* S29L A145G",3
"lib1","SARS-CoV-2","AAAGGCAGCTTATTGA",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S C49R Y93V Q163W",4
"lib1","SARS-CoV-2","AAAGGCATACAAGAAG",2,66.46,10.7,-0.06,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGCATACAGGTAA",2,29.52,9.68,-1.08,0.16,2.08,1,0.01,">1 nonsynonymous","N13G P54G D90E N130R E154L",5
"lib1","SARS-CoV-2","AAAGGCATCAAAAAAC",1,13.69,9.67,-1.1,0.09,2.89,1,0,"1 nonsynonymous","N109Y",1
"lib1","SARS-CoV-2","AAAGGCCAATATGTTA",3,34.28,10.51,-0.25,0.07,2.9,1,0,"1 nonsynonymous","F156A",1
"lib1","SARS-CoV-2","AAAGGCCACTCTTTGT",20,16.7,NA,NA,NA,NA,NA,NA,"stop","S53F A89* N130C I142R",4
"lib1","SARS-CoV-2","AAAGGCCAGATACGTG",10,2.82,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib1","SARS-CoV-2","AAAGGCCCAAATTTGA",4,48.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C102S R127S",2
"lib1","SARS-CoV-2","AAAGGCCCATCCGTCA",2,70.6,10.5,-0.26,0.07,2.82,1.06,0,"1 nonsynonymous","R27F",1
"lib1","SARS-CoV-2","AAAGGCCCCCTGAAAT",2,17.24,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42R K87R K94Y C102F",4
"lib1","SARS-CoV-2","AAAGGCCTGACTCTGG",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A42Y G117R P149V L188F",5
"lib1","SARS-CoV-2","AAAGGCCTTCTCAGTG",1,7.49,7.7,-3.06,0.39,1.5,1.26,0.05,">1 nonsynonymous","L122C P161M",2
"lib1","SARS-CoV-2","AAAGGCCTTTTATTTT",1,53.12,10.35,-0.41,0.05,2.88,1.03,0,">1 nonsynonymous","A14E V37G",2
"lib1","SARS-CoV-2","AAAGGCGATGTTATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A105P Y119V",3
"lib1","SARS-CoV-2","AAAGGCGCAGACGTGA",9,28.43,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","G86W F99D V182F",3
"lib1","SARS-CoV-2","AAAGGCGTGTTTACAA",8,158.1,10.19,-0.57,0.04,2.8,1.03,0,">1 nonsynonymous","A33Y T63L G155E",3
"lib1","SARS-CoV-2","AAAGGCTAAGCTATCT",5,96.66,6.54,-4.23,0.31,1.5,1.15,0.01,">1 nonsynonymous","I142M P177M",2
"lib1","SARS-CoV-2","AAAGGCTCGACACAAA",4,58.25,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K56L C158P R179I",3
"lib1","SARS-CoV-2","AAAGGCTGCACCTAAC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175G",1
"lib1","SARS-CoV-2","AAAGGCTGGCCCCAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A22* C150Y",2
"lib1","SARS-CoV-2","AAAGGCTGTAAAGTTG",5,57.95,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I28R G146M N151K L162V P177A",5
"lib1","SARS-CoV-2","AAAGGCTGTGAAAATG",2,14.6,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36V P54D N92F V173D Y178F",5
"lib1","SARS-CoV-2","AAAGGCTGTGCCAATC",1,47.81,10.05,-0.71,0.09,2.65,1,0,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","AAAGGCTTAAGTCTTG",1,18.37,6.64,-4.12,0.62,1.5,1.1,0.05,">1 nonsynonymous","C61F E154S Y165E",3
"lib1","SARS-CoV-2","AAAGGGAAACGGATGG",7,30.67,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64A D98I V103H F134E",4
"lib1","SARS-CoV-2","AAAGGGAAATGCAGTA",8,90.05,9.57,-1.2,0.12,2.44,1.09,0.01,">1 nonsynonymous","P133R F156V",2
"lib1","SARS-CoV-2","AAAGGGAAATTTTGAG",1,39.5,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A22G S36K Y119H G172Y",4
"lib1","SARS-CoV-2","AAAGGGAACCCGTCCG",5,22.03,6,-4.76,2,2.84,1.09,0,">1 nonsynonymous","C49S Y121S",2
"lib1","SARS-CoV-2","AAAGGGAAGTAGCAAG",8,80.41,9.11,-1.65,0.1,2.34,1.13,0,">1 nonsynonymous","T100L Y165V",2
"lib1","SARS-CoV-2","AAAGGGAAGTCAATCA",7,106.68,10.68,-0.09,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGGAATGTGAAGC",5,71.17,6.85,-3.92,0.31,1.5,1.13,0.02,">1 nonsynonymous","A81Q S139P",2
"lib1","SARS-CoV-2","AAAGGGAATTAAAGAA",2,15.29,9.33,-1.44,0.14,2.64,1.16,0.01,"1 nonsynonymous","G117V",1
"lib1","SARS-CoV-2","AAAGGGAATTCCAATA",6,29.05,8.22,-2.55,0.6,1.5,1,0.08,">1 nonsynonymous","D34A S45W C61T F99N R124L",5
"lib1","SARS-CoV-2","AAAGGGACAGGAAGAC",1,15.66,10.65,-0.11,0.04,2.92,1,0,">1 nonsynonymous","D90R P149G",2
"lib1","SARS-CoV-2","AAAGGGACCACTGAGA",2,50.36,10.21,-0.56,0.07,2.87,1.01,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","AAAGGGACGTAAAGAT",1,5.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S L95H G116R L131V",4
"lib1","SARS-CoV-2","AAAGGGAGGTCCCTAG",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S G101S K114R P169M",4
"lib1","SARS-CoV-2","AAAGGGATATATCTTG",2,24.5,8.88,-1.89,0.37,1.5,1.11,0.04,">1 nonsynonymous","E76V D90S F156R",3
"lib1","SARS-CoV-2","AAAGGGATGGCCAATG",5,36.03,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F44L V103S G116L",3
"lib1","SARS-CoV-2","AAAGGGATTGTACTGC",3,48.72,10.38,-0.39,0.06,2.77,1.01,0,">1 nonsynonymous","N4M F44G",2
"lib1","SARS-CoV-2","AAAGGGCAAAAAATAA",1,6.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N151D P169R L183A",3
"lib1","SARS-CoV-2","AAAGGGCAAAAAATTC",7,30.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105E",1
"lib1","SARS-CoV-2","AAAGGGCAAAGAGCCG",9,383.53,8.94,-1.83,0.06,2.69,1.09,0,">1 nonsynonymous","Q163S Q176S",2
"lib1","SARS-CoV-2","AAAGGGCAAATATACG",5,62.25,10.18,-0.58,0.1,2.72,1.04,0,">1 nonsynonymous","A18V S41C",2
"lib1","SARS-CoV-2","AAAGGGCAGATTATCT",3,0.9,NA,NA,NA,NA,NA,NA,"stop","L5W P82* Y165L",3
"lib1","SARS-CoV-2","AAAGGGCATCTAAATG",4,31.22,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7L C61R N157S G166V V181L T201Y",6
"lib1","SARS-CoV-2","AAAGGGCCTAGTCAAA",2,86.76,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V20M Y50R Y91L Y119K",4
"lib1","SARS-CoV-2","AAAGGGCGGTCGAAAA",1,41.33,10.48,-0.29,0.06,2.93,1.03,0,">1 nonsynonymous","N30R S36M",2
"lib1","SARS-CoV-2","AAAGGGCTTGTATATG",6,177.59,10.27,-0.49,0.02,2.92,1.02,0,">1 nonsynonymous","N1R T170A",2
"lib1","SARS-CoV-2","AAAGGGGCCCGGGAGG",5,29.04,8.54,-2.22,0.13,1.5,1.06,0.01,">1 nonsynonymous","N1L Y165N",2
"lib1","SARS-CoV-2","AAAGGGGGCATTATAC",5,163.6,10.76,-0.01,0.06,2.92,1.05,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","AAAGGGTAAACCGTGG",9,53.1,7.45,-3.31,0.43,1.5,1,0.05,">1 nonsynonymous","L95F G174V V181T",3
"lib1","SARS-CoV-2","AAAGGGTCAGTCATAT",1,30.82,6,-4.76,0.91,1.5,1.11,0.01,">1 nonsynonymous","E10S R124N K198V",3
"lib1","SARS-CoV-2","AAAGGGTGAATCAGCA",4,5.56,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T3L V11G D98H G166W",4
"lib1","SARS-CoV-2","AAAGGGTGCCGCATTT",1,2.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L111K",1
"lib1","SARS-CoV-2","AAAGGGTTCATAGTCA",2,19.16,10.47,-0.29,0.08,2.94,1.06,0,">1 nonsynonymous","K48A L122K E141C",3
"lib1","SARS-CoV-2","AAAGGTAAATAAAGGA",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92W E186Q K198R",3
"lib1","SARS-CoV-2","AAAGGTAACACCGTGC",3,340.22,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N40V P177W",2
"lib1","SARS-CoV-2","AAAGGTAAGGATAACC",3,6.22,6.77,-3.99,0.9,1.5,1,0.08,">1 nonsynonymous","C61F I88G V103H N151Y",4
"lib1","SARS-CoV-2","AAAGGTACAACACTTA",6,109.07,10.68,-0.09,0.08,2.89,1.06,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","AAAGGTACGGCCCAAA",1,16.04,6,-4.76,2,2.28,1.1,0.01,">1 nonsynonymous","L38T K48P",2
"lib1","SARS-CoV-2","AAAGGTACTTCTAAAC",12,53.44,6.19,-4.57,0.37,1.5,1.12,0.01,">1 nonsynonymous","C49R V103F G155K",3
"lib1","SARS-CoV-2","AAAGGTAGATGATCAT",4,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P G74I K94T K198Q",4
"lib1","SARS-CoV-2","AAAGGTAGTCCTGAAG",13,89.3,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F12Y F99H N120Y",3
"lib1","SARS-CoV-2","AAAGGTATATACGACA",12,210.45,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y50P K94A V103L K128I F134V",5
"lib1","SARS-CoV-2","AAAGGTATGCAGGGAC",2,42.82,9.43,-1.33,0.09,2.1,1.12,0,">1 nonsynonymous","N1R R16C Y121C S184T",4
"lib1","SARS-CoV-2","AAAGGTATGCGCAAGC",3,50.9,9.87,-0.89,0.27,1.6,1.09,0.03,"1 nonsynonymous","L131Q",1
"lib1","SARS-CoV-2","AAAGGTATGTCAGGGA",1,41.05,9.32,-1.45,0.2,1.91,1.07,0.02,">1 nonsynonymous","D90I F134N",2
"lib1","SARS-CoV-2","AAAGGTATGTGGCGAA",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T T55C G196W",3
"lib1","SARS-CoV-2","AAAGGTATTAGTGTTG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","T55S E76* I88K D98T I104H",5
"lib1","SARS-CoV-2","AAAGGTATTTAAGCAA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","W23R C31L V37E A89N T100V S129Y Q144* F156R",8
"lib1","SARS-CoV-2","AAAGGTCAAATAATAG",9,74.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y121G S147C Y175M",3
"lib1","SARS-CoV-2","AAAGGTCACCTATAAT",2,20.68,8.68,-2.08,0.09,2.9,1.12,0,">1 nonsynonymous","E135T F156E",2
"lib1","SARS-CoV-2","AAAGGTCATAATAGCC",3,47.18,10.34,-0.43,0.07,2.9,1.06,0,">1 nonsynonymous","T3I V32C T140S",3
"lib1","SARS-CoV-2","AAAGGTCCAAACGAAA",1,65.31,9.34,-1.43,0.06,2.74,1.16,0,">1 nonsynonymous","Y50F K87D D97M",3
"lib1","SARS-CoV-2","AAAGGTCGGCGTTCCA",3,13.14,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","W106P K132L",2
"lib1","SARS-CoV-2","AAAGGTGAACAATAAG",4,21.57,9.9,-0.86,0.13,2.61,1.08,0,">1 nonsynonymous","G9L E76M",2
"lib1","SARS-CoV-2","AAAGGTGAGGCGACAG",4,15.48,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","D90H R179F",2
"lib1","SARS-CoV-2","AAAGGTGAGTAATCTT",1,0.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106F",1
"lib1","SARS-CoV-2","AAAGGTGAGTATCAAG",9,31.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5C A89F L122S N151F E186T S200R",6
"lib1","SARS-CoV-2","AAAGGTGATTTGCCAA",12,256.8,10.77,0,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGGTGCATAACTAC",1,62.59,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36L R124L Q163S",3
"lib1","SARS-CoV-2","AAAGGTGTACAGTAGC",3,35.1,10.78,0.02,0.09,2.91,1.07,0,">1 nonsynonymous","K26I N130I",2
"lib1","SARS-CoV-2","AAAGGTGTACGTTAAC",7,77.34,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I2T Y50L F62L R73A A81G V103L",6
"lib1","SARS-CoV-2","AAAGGTTAAATAAACA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","T55G A105G G174*",3
"lib1","SARS-CoV-2","AAAGGTTAACCCACGT",2,64.13,9.41,-1.36,0.17,1.89,1.18,0.01,">1 nonsynonymous","F8Y F44R F62T",3
"lib1","SARS-CoV-2","AAAGGTTAATCTCTAT",4,41.54,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P7Q N58P A81K D90C I104M Y119W V153G",7
"lib1","SARS-CoV-2","AAAGGTTACAACAAAA",1,0.35,NA,NA,NA,NA,NA,NA,"stop","N4M D68* A89I P149L A192L",5
"lib1","SARS-CoV-2","AAAGGTTAGATGACAT",2,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S C49S L57F V103D V180K",5
"lib1","SARS-CoV-2","AAAGGTTCAGCCCTGT",1,35.29,10.71,-0.05,0.05,2.76,1.15,0,"1 nonsynonymous","G116K",1
"lib1","SARS-CoV-2","AAAGGTTCCATAACAG",6,41.75,9.19,-1.58,0.32,1.5,1.08,0.05,">1 nonsynonymous","S43F Y121V S139H",3
"lib1","SARS-CoV-2","AAAGGTTCCTGATCAA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L F167I S184W",3
"lib1","SARS-CoV-2","AAAGGTTCGACAACCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70S",1
"lib1","SARS-CoV-2","AAAGGTTGAGTATTGA",2,19.34,9.88,-0.88,0.13,2.13,1.07,0.01,">1 nonsynonymous","P7S T15M D90T L188H",4
"lib1","SARS-CoV-2","AAAGGTTTAAAAACAA",1,6.7,9.62,-1.14,0.25,2.23,1.04,0.02,">1 nonsynonymous","S36C F44I",2
"lib1","SARS-CoV-2","AAAGGTTTTAGTATCG",3,3.14,NA,NA,NA,NA,NA,NA,"stop","C49* R127N",2
"lib1","SARS-CoV-2","AAAGTAAAAATATCAG",3,33.52,8.74,-2.02,0.11,2.81,1.11,0.01,">1 nonsynonymous","D97I N157H",2
"lib1","SARS-CoV-2","AAAGTAAAAATTACTA",6,43.02,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L57K R124S P133C T140N",4
"lib1","SARS-CoV-2","AAAGTAAAACCACTAT",4,31.05,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N1F I88E R124I T201K",4
"lib1","SARS-CoV-2","AAAGTAAAAGAATCCA",2,2.27,NA,NA,NA,NA,NA,NA,"stop","R25W N58D G86*",3
"lib1","SARS-CoV-2","AAAGTAAAAGTTGCGA",8,76.96,10.22,-0.55,0.07,2.8,1.06,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","AAAGTAAAGAGACGAT",9,2.41,NA,NA,NA,NA,NA,NA,"stop","P82Q S113* Y119G Q144W",4
"lib1","SARS-CoV-2","AAAGTAAATATAGTCC",1,39.44,10.19,-0.58,0.15,2.66,1.06,0.01,">1 nonsynonymous","A22V F160R",2
"lib1","SARS-CoV-2","AAAGTAAATCAGAACG",1,6.67,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N13Y K94I",2
"lib1","SARS-CoV-2","AAAGTAACAAGCTCTT",9,50.65,8.31,-2.46,0.14,2.33,1.13,0.01,">1 nonsynonymous","S41F S113G G152V",3
"lib1","SARS-CoV-2","AAAGTAACAGTGCTGA",1,7.48,8.2,-2.57,0.52,1.5,1,0.08,">1 nonsynonymous","F70A F167Y",2
"lib1","SARS-CoV-2","AAAGTAACATTAAGTT",7,65.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y91E D112L",2
"lib1","SARS-CoV-2","AAAGTAAGAAACAAGA",3,105.63,10.03,-0.73,0.08,2.63,1.1,0,">1 nonsynonymous","N4G N40D N107A",3
"lib1","SARS-CoV-2","AAAGTAAGATGACTAA",6,9.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44I C102D V115W P169L V181R",5
"lib1","SARS-CoV-2","AAAGTAAGCAACAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S29I G51* D98S R136T S184T",5
"lib1","SARS-CoV-2","AAAGTAAGGTAAGTAA",6,175.27,10.04,-0.73,0.08,2.63,1.03,0,"1 nonsynonymous","N13C",1
"lib1","SARS-CoV-2","AAAGTAAGTGTGGCAT",1,22.6,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","T46S K128W G146L",3
"lib1","SARS-CoV-2","AAAGTAATCAAACTAG",12,83.53,6,-4.76,2,3,1.2,0,">1 nonsynonymous","K87E K132S P149M P161T",4
"lib1","SARS-CoV-2","AAAGTAATCACGAAAC",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y L111W T170D R179T",4
"lib1","SARS-CoV-2","AAAGTAATCAGTATCC",1,2.19,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAAGTAATCTGTCTAT",7,126.56,10.37,-0.39,0.06,2.93,1,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","AAAGTAATGCGTTGTT",9,24.23,9.81,-0.96,0.27,1.5,1,0.08,">1 nonsynonymous","T15F G83I",2
"lib1","SARS-CoV-2","AAAGTAATGTGCAAAC",9,37.17,6.13,-4.64,1.48,1.5,1.28,0.04,">1 nonsynonymous","I2P I88H D112L R124P Y178L",5
"lib1","SARS-CoV-2","AAAGTAATTAAACAGA",6,1.92,NA,NA,NA,NA,NA,NA,"stop","N13A Y39I T140*",3
"lib1","SARS-CoV-2","AAAGTAATTACAAGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","W106* G155R",2
"lib1","SARS-CoV-2","AAAGTAATTCCTGAAG",7,29.55,6.16,-4.61,0.59,1.5,1.17,0.01,">1 nonsynonymous","W23K C31T P82K",3
"lib1","SARS-CoV-2","AAAGTAATTGTAAAAT",18,82.5,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W106C I142K",2
"lib1","SARS-CoV-2","AAAGTACAAAATATTA",2,42.8,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F44T D68V E76W I88S",4
"lib1","SARS-CoV-2","AAAGTACAAACACAAA",5,0.77,NA,NA,NA,NA,NA,NA,"stop","N40T G101N P149* P161A",4
"lib1","SARS-CoV-2","AAAGTACAATGCTACA",7,0.48,NA,NA,NA,NA,NA,NA,"stop","P7L S29*",2
"lib1","SARS-CoV-2","AAAGTACAGGGAATTG",5,8.5,10.64,-0.12,0.11,2.79,1.09,0.01,">1 nonsynonymous","A89S T148E",2
"lib1","SARS-CoV-2","AAAGTACATGCAATTC",8,144.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R124F P149E",2
"lib1","SARS-CoV-2","AAAGTACCGAATTCTT",1,25.27,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G9V S19I C31E",3
"lib1","SARS-CoV-2","AAAGTACGAGTACGCA",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C G86K Y93F R127C N157P",5
"lib1","SARS-CoV-2","AAAGTACGGCTGAGTA",5,75.98,10.75,-0.01,0.05,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTACGTGCTAGAA",3,48.78,7,-3.76,0.41,1.5,1.14,0.04,">1 nonsynonymous","G83K A105R",2
"lib1","SARS-CoV-2","AAAGTACTAAAATAAC",5,179.76,8.8,-1.96,0.11,1.86,1.1,0,">1 nonsynonymous","C6E K56V F160I",3
"lib1","SARS-CoV-2","AAAGTACTAGTAACGT",1,2.05,NA,NA,NA,NA,NA,NA,"stop","E10V T140G V194I T201*",4
"lib1","SARS-CoV-2","AAAGTACTCTTGTGGA",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101W K198D",2
"lib1","SARS-CoV-2","AAAGTAGAAGCTAGCT",3,24.42,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K87Q A105R P149S S164V Y175A",5
"lib1","SARS-CoV-2","AAAGTAGAATATATAA",5,152.06,10.7,-0.06,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTAGACCTACTTA",7,159.26,10.16,-0.6,0.08,2.4,1.02,0,">1 nonsynonymous","G51R K94S",2
"lib1","SARS-CoV-2","AAAGTAGACTCGCCAT",1,38.83,9.62,-1.14,0.13,2.39,1.04,0.01,">1 nonsynonymous","N13G Q176M",2
"lib1","SARS-CoV-2","AAAGTAGATAAATCAT",2,57.17,9.8,-0.96,0.13,2.08,1.05,0.01,">1 nonsynonymous","A33N S53K Y178A",3
"lib1","SARS-CoV-2","AAAGTAGATATAGGAG",9,45.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W106K G146L F167R",3
"lib1","SARS-CoV-2","AAAGTAGCAAACTATT",2,64.71,9.49,-1.28,0.09,2.69,1.17,0,">1 nonsynonymous","S53E R73G",2
"lib1","SARS-CoV-2","AAAGTAGCATCACACT",1,11.73,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","R73L F167H T201R",3
"lib1","SARS-CoV-2","AAAGTAGCCCTCCCTA",2,44.86,7.29,-3.47,0.37,1.5,1.09,0.05,">1 nonsynonymous","A33T Y39K Q84F P96H K198Y",5
"lib1","SARS-CoV-2","AAAGTAGGCCCTACGG",2,13.38,10.72,-0.04,0.1,2.92,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTATAAAACATAT",2,63.67,10.63,-0.14,0.07,2.98,1.01,0,"1 nonsynonymous","Y39E",1
"lib1","SARS-CoV-2","AAAGTATAAAAGACCA",1,14.15,10.68,-0.09,0.09,2.96,1,0,">1 nonsynonymous","G9N P54L A190I",3
"lib1","SARS-CoV-2","AAAGTATAAAAGCTTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55W N107G N118E",3
"lib1","SARS-CoV-2","AAAGTATAATATAAGT",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1E S45I Y50H W106Y Q168P",5
"lib1","SARS-CoV-2","AAAGTATACCTAGCAC",3,0,NA,NA,NA,NA,NA,NA,"stop","S43P D97* L131A",3
"lib1","SARS-CoV-2","AAAGTATAGGACTCTA",3,32.63,6.83,-3.93,0.52,1.5,1.1,0.06,">1 nonsynonymous","S29P F44P L60P T100N Q163D Q168I V173M",7
"lib1","SARS-CoV-2","AAAGTATATCTGTATA",1,5.31,9.93,-0.83,0.14,2.8,1.17,0.01,">1 nonsynonymous","S36M R73S",2
"lib1","SARS-CoV-2","AAAGTATATGATACAT",2,14.87,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y66P N107A N120S K128R T201L",5
"lib1","SARS-CoV-2","AAAGTATCACACATAC",6,0.24,NA,NA,NA,NA,NA,NA,"stop","Y123* S139T T201K",3
"lib1","SARS-CoV-2","AAAGTATCATTGACGG",3,22.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G51N G86S N120M P149L",4
"lib1","SARS-CoV-2","AAAGTATCCACCCCCC",4,70.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V71L Y91V T100H L131F",4
"lib1","SARS-CoV-2","AAAGTATCTGATTTAC",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S N107E E141D",3
"lib1","SARS-CoV-2","AAAGTATGACCAAGCC",2,34.98,10.63,-0.13,0.04,2.9,1.06,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","AAAGTATGACGCACGT",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R D98Y C158F",3
"lib1","SARS-CoV-2","AAAGTATGCGCGGATG",1,8.92,10.55,-0.22,0.11,2.7,1.24,0.01,">1 nonsynonymous","L122H K128I",2
"lib1","SARS-CoV-2","AAAGTATGTGAGGAGC",3,49.13,8.97,-1.79,0.47,1.5,1,0.06,">1 nonsynonymous","N151S G172K",2
"lib1","SARS-CoV-2","AAAGTATTAACGGACA",4,42.76,10.63,-0.14,0.05,2.98,1,0,"1 nonsynonymous","P169S",1
"lib1","SARS-CoV-2","AAAGTATTAGTAGGGT",1,23.24,8.77,-1.99,0.07,2.73,1.2,0,">1 nonsynonymous","I2D S43G F126T",3
"lib1","SARS-CoV-2","AAAGTATTGATCTGTC",6,63.32,9.49,-1.28,0.06,2.75,1.1,0,">1 nonsynonymous","N58I Q168E",2
"lib1","SARS-CoV-2","AAAGTATTGATCTTAA",3,1.82,NA,NA,NA,NA,NA,NA,"stop","T3M Y35I A42* A67S E76R",5
"lib1","SARS-CoV-2","AAAGTATTTCGGAGGC",3,42.29,10.76,0,0.04,2.98,1.01,0,"1 nonsynonymous","N1F",1
"lib1","SARS-CoV-2","AAAGTATTTTATCGTA",1,49.94,8.57,-2.19,0.24,1.58,1.1,0.02,">1 nonsynonymous","V65M S108I",2
"lib1","SARS-CoV-2","AAAGTCAAACGGAGTA",7,126.14,8.37,-2.39,0.18,1.76,1.12,0.01,">1 nonsynonymous","E10L V37K D98S G117C",4
"lib1","SARS-CoV-2","AAAGTCAAAGTGCGGG",1,13.76,6.23,-4.53,0.24,1.5,1.01,0,">1 nonsynonymous","S53L L60N Y91D F99L N107S Y119D K199T",7
"lib1","SARS-CoV-2","AAAGTCAAATAAAAAA",1,2.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","AAAGTCAAATGTCCGA",5,6.93,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L122P F167V",2
"lib1","SARS-CoV-2","AAAGTCAAATGTTACA",2,24.28,6.61,-4.15,0.42,1.5,1.11,0.02,">1 nonsynonymous","N4S V103M R136L",3
"lib1","SARS-CoV-2","AAAGTCAACCACCCTG",1,127.16,9.68,-1.09,0.06,2.86,1.06,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","AAAGTCAACCGTATCT",2,24.05,8.66,-2.11,0.27,1.5,1.03,0.02,">1 nonsynonymous","F12E P54S",2
"lib1","SARS-CoV-2","AAAGTCAAGCAAACAA",3,78.83,10.76,0,0.09,2.84,1.06,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","AAAGTCAAGGATTAAA",5,18.32,7.1,-3.66,0.54,1.5,1.24,0.05,">1 nonsynonymous","V37F Y143S P149K L162M",4
"lib1","SARS-CoV-2","AAAGTCAATACACAGC",1,15.34,10.3,-0.47,0.06,2.91,1.02,0,">1 nonsynonymous","P7F T55Y T100I",3
"lib1","SARS-CoV-2","AAAGTCACACCTGCTA",5,148.66,10.03,-0.74,0.06,2.87,1.03,0,">1 nonsynonymous","S41G G166S T201M",3
"lib1","SARS-CoV-2","AAAGTCACAGCTGAGT",4,16.42,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A22K K48W C61P Y91P I138G",5
"lib1","SARS-CoV-2","AAAGTCAGAAGACTAT",3,55.18,8.7,-2.06,0.15,2.11,1.14,0.01,">1 nonsynonymous","F167L K199M",2
"lib1","SARS-CoV-2","AAAGTCAGACAACCTT",5,27.94,8.47,-2.3,0.31,1.5,1.22,0.05,">1 nonsynonymous","N13I G51R",2
"lib1","SARS-CoV-2","AAAGTCAGCCGGGAAC",3,7.13,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N4G K94E",2
"lib1","SARS-CoV-2","AAAGTCAGTAAAAACC",2,127.02,9.38,-1.39,0.08,2.73,1.11,0,">1 nonsynonymous","T55Y I142R",2
"lib1","SARS-CoV-2","AAAGTCATAATCACGC",8,75.57,10.49,-0.28,0.05,2.92,1.04,0,">1 nonsynonymous","C61P F160V",2
"lib1","SARS-CoV-2","AAAGTCATACTATAAA",3,24.34,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D34R F70G N107T V153R P161D",5
"lib1","SARS-CoV-2","AAAGTCATATGAAATG",6,116.71,9.89,-0.88,0.09,1.88,1.06,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","AAAGTCATATGAATCG",3,0,NA,NA,NA,NA,NA,NA,"stop","V32D K56R T63R N92M E141*",5
"lib1","SARS-CoV-2","AAAGTCATCAAATCCA",7,274.49,10.23,-0.54,0.05,2.73,1.06,0,">1 nonsynonymous","K132V Y178M",2
"lib1","SARS-CoV-2","AAAGTCATGACTACAA",6,1.07,NA,NA,NA,NA,NA,NA,"stop","Y39N W106S E135L F156* Q168S T201A",6
"lib1","SARS-CoV-2","AAAGTCATTAAGTAAT",4,40.55,10.41,-0.35,0.07,2.77,1.07,0,">1 nonsynonymous","E10R D59S N130D K198N T201R",5
"lib1","SARS-CoV-2","AAAGTCATTTTGCTGG",2,12.04,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8S Q84T N118K",3
"lib1","SARS-CoV-2","AAAGTCCAACCACCTA",1,0.98,NA,NA,NA,NA,NA,NA,"stop","N40S Y91I N107V Y121* S139* T148M",6
"lib1","SARS-CoV-2","AAAGTCCAGGAACGAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","I88M P133V P161L L183*",4
"lib1","SARS-CoV-2","AAAGTCCAGGACGTAA",7,11.57,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V181Y",1
"lib1","SARS-CoV-2","AAAGTCCAGTCCGATC",5,46.64,10.87,0.11,0.09,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTCCATTACATAG",1,64.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K132I P177T",2
"lib1","SARS-CoV-2","AAAGTCCATTAGGACA",2,78.54,9.6,-1.16,0.16,1.66,1.13,0.01,">1 nonsynonymous","E10N L38P",2
"lib1","SARS-CoV-2","AAAGTCCATTCGAGCA",1,21.57,10.64,-0.12,0.08,2.89,1.08,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","AAAGTCCCAAAACAAA",2,10.22,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V52N N107R T170F Y178R",4
"lib1","SARS-CoV-2","AAAGTCCCTCAAACTA",3,28.79,10.74,-0.03,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTCCGAACATCCA",7,105.79,10.59,-0.18,0.05,2.9,1.03,0,">1 nonsynonymous","F62W Y121L P149G",3
"lib1","SARS-CoV-2","AAAGTCCTGACGCCAG",2,21.86,10.77,0.01,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTCGAACCAAGTG",6,95.97,9.05,-1.72,0.13,1.5,1.14,0.01,">1 nonsynonymous","F17H N110P",2
"lib1","SARS-CoV-2","AAAGTCGATCTAATCT",1,93.41,8.99,-1.77,0.12,2.46,1.14,0.01,">1 nonsynonymous","A18W L60C F156T",3
"lib1","SARS-CoV-2","AAAGTCTAAATACCAT",1,71.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2R V37E K48E G117S S139M Q144R",6
"lib1","SARS-CoV-2","AAAGTCTAAATATAAT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","D98T G117*",2
"lib1","SARS-CoV-2","AAAGTCTCACTATTAA",3,37.41,10.75,-0.01,0.09,2.91,1.07,0,"1 nonsynonymous","T201D",1
"lib1","SARS-CoV-2","AAAGTCTCCGACTTAG",6,0.65,NA,NA,NA,NA,NA,NA,"stop","E10M D59Y G86F T140D A145*",5
"lib1","SARS-CoV-2","AAAGTCTCCTGTTCAC",5,2.29,NA,NA,NA,NA,NA,NA,"stop","N4* G51I V180I",3
"lib1","SARS-CoV-2","AAAGTCTCGAAAACAA",4,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25N F44I A89V",3
"lib1","SARS-CoV-2","AAAGTCTTCATCCCGG",1,11.84,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","K87M P177V",2
"lib1","SARS-CoV-2","AAAGTGAAAATAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K87* T100S V103G",3
"lib1","SARS-CoV-2","AAAGTGAACAAATGAA",2,46.56,10.41,-0.35,0.15,2.5,1.09,0.01,">1 nonsynonymous","S41N V65R Y123L",3
"lib1","SARS-CoV-2","AAAGTGAACACACAAA",12,261.54,6.02,-4.74,0.62,1.5,1.16,0.01,">1 nonsynonymous","I2S C158Y",2
"lib1","SARS-CoV-2","AAAGTGACAGCGGTAA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","R136I F156A Y165V V180* T201Y",5
"lib1","SARS-CoV-2","AAAGTGACTCAACTAT",3,35.97,7.42,-3.35,0.25,1.5,1.04,0.03,"1 nonsynonymous","A89E",1
"lib1","SARS-CoV-2","AAAGTGAGAAGCTAGT",2,35.38,9.41,-1.35,0.06,2.72,1.11,0,">1 nonsynonymous","A42V G174V",2
"lib1","SARS-CoV-2","AAAGTGAGACTCGATA",8,37.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33P G101S",2
"lib1","SARS-CoV-2","AAAGTGAGGAATGATT",1,43.68,6,-4.76,1.47,1.5,1.19,0.02,">1 nonsynonymous","K94W G116E",2
"lib1","SARS-CoV-2","AAAGTGATAAAGGACA",2,44.54,9.22,-1.54,0.18,2.07,1.2,0.01,">1 nonsynonymous","L5F Y121V F160C",3
"lib1","SARS-CoV-2","AAAGTGATATACCCGT",3,78.98,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","N30M I142V Q176D T201R",4
"lib1","SARS-CoV-2","AAAGTGATCTGTCTGA",5,45.45,9.13,-1.63,0.1,1.94,1.09,0,">1 nonsynonymous","C6I D97Y V115M T201V",4
"lib1","SARS-CoV-2","AAAGTGATGAGCTACT",4,92.63,10.5,-0.26,0.05,2.85,1.11,0,">1 nonsynonymous","D97N Y121L",2
"lib1","SARS-CoV-2","AAAGTGATGCGAGCAT",1,22.04,9.45,-1.31,0.26,1.5,1.01,0.03,">1 nonsynonymous","A89F P149G",2
"lib1","SARS-CoV-2","AAAGTGATTGGACAAA",6,25.48,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F44R E135K G166N V173S",4
"lib1","SARS-CoV-2","AAAGTGCAAGGAAAGG",4,72.83,9.42,-1.34,0.07,2.79,1.11,0,">1 nonsynonymous","C61R D112E",2
"lib1","SARS-CoV-2","AAAGTGCAAGTGACCA",2,9.1,6.52,-4.24,1.36,1.5,1.11,0.01,">1 nonsynonymous","D97E C102R G172N",3
"lib1","SARS-CoV-2","AAAGTGCCCCGATCAG",1,0.35,NA,NA,NA,NA,NA,NA,"stop","P149S G155*",2
"lib1","SARS-CoV-2","AAAGTGCCGTAATTGA",2,19,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G74H P96T F167L",3
"lib1","SARS-CoV-2","AAAGTGCCGTATAAAA",8,93.21,10.74,-0.03,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTGCTACTAAAAC",4,6.27,NA,NA,NA,NA,NA,NA,"stop","P82V N92*",2
"lib1","SARS-CoV-2","AAAGTGCTCATGAAAA",2,9.48,6.48,-4.28,1.77,1.5,1.09,0.04,">1 nonsynonymous","I2R N30M G74R Y119M D137R Y175R",6
"lib1","SARS-CoV-2","AAAGTGCTTACCACCC",6,75.73,8.79,-1.98,0.13,2.08,1.2,0.01,">1 nonsynonymous","T3I G116K I142A",3
"lib1","SARS-CoV-2","AAAGTGGAACATACTA",5,33.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3N A14D C158L",3
"lib1","SARS-CoV-2","AAAGTGGAACTACAAA",8,51.3,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D59R D98C D137N Y143M L183H",5
"lib1","SARS-CoV-2","AAAGTGGACAATGTCA",1,40.97,10.73,-0.04,0.04,2.94,1.04,0,">1 nonsynonymous","C61A L122M",2
"lib1","SARS-CoV-2","AAAGTGGACTCTAATG",4,39.31,8.71,-2.05,0.1,2.93,1,0,">1 nonsynonymous","K56D D90Q E154N G166L",4
"lib1","SARS-CoV-2","AAAGTGGAGCATAATG",5,9.92,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T15Y F185S",2
"lib1","SARS-CoV-2","AAAGTGGGAAGTAACT",6,21.33,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5M V103L Y121S",3
"lib1","SARS-CoV-2","AAAGTGTACATCATAA",4,8.64,6,-4.76,2,3,1.11,0,">1 nonsynonymous","T15V D59M K94P",3
"lib1","SARS-CoV-2","AAAGTGTATCAAAGAT",2,20.42,10.39,-0.38,0.11,2.86,1.04,0,">1 nonsynonymous","L60G T140V T201D",3
"lib1","SARS-CoV-2","AAAGTGTATTGCTCCA",6,11.95,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib1","SARS-CoV-2","AAAGTGTCTATAAGTA",3,8.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y F44K F62Q R127P Q144L",5
"lib1","SARS-CoV-2","AAAGTGTGAAAATGAC",2,26.64,9.95,-0.82,0.13,2.57,1.01,0.01,">1 nonsynonymous","E135V K198T",2
"lib1","SARS-CoV-2","AAAGTGTGATACTCAA",13,1.45,NA,NA,NA,NA,NA,NA,"stop","L5R E10N D98K G155L T201*",5
"lib1","SARS-CoV-2","AAAGTGTGATAGTGCT",4,25.38,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A89R P96T F126L C150Y S164A S200D",6
"lib1","SARS-CoV-2","AAAGTGTGCATTAACA",1,35.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30L K48S P54Y Q144P K199F",5
"lib1","SARS-CoV-2","AAAGTGTTTAAACCGC",13,6.01,NA,NA,NA,NA,NA,NA,"stop","S43F R73M T148R V153*",4
"lib1","SARS-CoV-2","AAAGTTAAAGATGGAA",5,66.16,6.12,-4.65,1.15,1.5,1.2,0.04,">1 nonsynonymous","A33P K48E N64I P133L P149M R179G",6
"lib1","SARS-CoV-2","AAAGTTAAAGCCCATC",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29F S45T K56Q C61S D112V S139D A190D",7
"lib1","SARS-CoV-2","AAAGTTAAAGTACTCC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","G9L N13M L60* P169N",4
"lib1","SARS-CoV-2","AAAGTTAACAACAAAA",10,2602.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83Y C158G P161N",3
"lib1","SARS-CoV-2","AAAGTTAACGTAAAAA",8,217.51,10.76,-0.01,0.09,2.84,1.08,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","AAAGTTAATCAATAAA",2,23.44,10.76,-0.01,0.07,2.86,1.03,0,"1 nonsynonymous","V32C",1
"lib1","SARS-CoV-2","AAAGTTACAACTATGT",2,30.98,10.61,-0.15,0.05,2.92,1.02,0,">1 nonsynonymous","S36G S43P V173W",3
"lib1","SARS-CoV-2","AAAGTTACAATCATCG",6,3.47,NA,NA,NA,NA,NA,NA,"stop","N1* K199T",2
"lib1","SARS-CoV-2","AAAGTTACACTATACG",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19N R25T S129Y",3
"lib1","SARS-CoV-2","AAAGTTACCAGGAAAA",4,53.34,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","AAAGTTACCATAGGCA",5,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E S43H C61Q P96S P177Y L183S",6
"lib1","SARS-CoV-2","AAAGTTACCTTTGTGG",1,57.8,10.64,-0.12,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTTAGCCCTGTAC",7,28.74,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14G F44I E76K R136C",4
"lib1","SARS-CoV-2","AAAGTTAGCGCATAGT",1,12.46,10.62,-0.14,0.07,3,1,0,">1 nonsynonymous","I28F V182T",2
"lib1","SARS-CoV-2","AAAGTTAGCGTCAGTT",5,33.39,10.13,-0.63,0.1,2.8,1.01,0,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","AAAGTTAGGACTTCAA",6,90.09,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I142F P161K",2
"lib1","SARS-CoV-2","AAAGTTAGTAACCAAA",1,19.42,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","N64S N157I F185S",3
"lib1","SARS-CoV-2","AAAGTTAGTGCAGATT",6,36.85,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T46C K56Q F99N T148R",4
"lib1","SARS-CoV-2","AAAGTTATAGCACCAA",4,59.28,10.76,0,0.09,2.85,1.09,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AAAGTTCAATGACCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","I28M D68* G83D",3
"lib1","SARS-CoV-2","AAAGTTCACATGACCA",1,7.15,NA,NA,NA,NA,NA,NA,"stop","R16D S45D D90N P96S W106*",5
"lib1","SARS-CoV-2","AAAGTTCAGCCGAAAG",1,6.26,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","L5I G101A P149H V182F S200I",5
"lib1","SARS-CoV-2","AAAGTTCAGGTGTGAT",1,59.08,10.77,0,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAAGTTCCTCCTTGAT",9,127.19,9.52,-1.25,0.12,1.85,1.13,0.01,">1 nonsynonymous","F44C K114W E141V P149S",4
"lib1","SARS-CoV-2","AAAGTTCCTTAAAACC",8,49.23,8.45,-2.31,0.18,1.51,1.2,0.01,">1 nonsynonymous","V11D Y143M",2
"lib1","SARS-CoV-2","AAAGTTCGCCGAACGT",2,50.22,6,-4.76,2,1.5,1.22,0.03,"1 nonsynonymous","R124F",1
"lib1","SARS-CoV-2","AAAGTTCGTAAAGCCA",4,59.24,10.19,-0.57,0.05,2.56,1.08,0,">1 nonsynonymous","K56S F70M",2
"lib1","SARS-CoV-2","AAAGTTGACTTTTTAT",7,23.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N L95K K114E",3
"lib1","SARS-CoV-2","AAAGTTGAGACTTAAA",1,24.68,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","A18G V37S D98V N107I K114E",5
"lib1","SARS-CoV-2","AAAGTTGCCACATAAC",4,52.59,9.39,-1.37,0.14,2.02,1.14,0.01,">1 nonsynonymous","N40K R136T G155T",3
"lib1","SARS-CoV-2","AAAGTTGCCTAATCAA",2,36.19,6.45,-4.31,0.51,1.5,1.19,0.03,">1 nonsynonymous","D112L Y178G",2
"lib1","SARS-CoV-2","AAAGTTGGGAAACAGG",2,7.75,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G101V K132Q",2
"lib1","SARS-CoV-2","AAAGTTGTAAATAGCA",8,76.68,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68L G146T",2
"lib1","SARS-CoV-2","AAAGTTTAAACTTGTA",8,63.59,8.97,-1.8,0.11,2.45,1.1,0.01,">1 nonsynonymous","R73P P149V",2
"lib1","SARS-CoV-2","AAAGTTTAAAGCGTAG",6,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R W106G T148I",3
"lib1","SARS-CoV-2","AAAGTTTAACTCCTCC",1,26.69,10.71,-0.05,0.05,2.97,1.01,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","AAAGTTTATATAATTC",1,22.32,10,-0.77,0.15,2.02,1.03,0.01,"1 nonsynonymous","A105N",1
"lib1","SARS-CoV-2","AAAGTTTCAAACTGTA",1,13.65,9.81,-0.95,0.14,2.58,1.35,0.01,">1 nonsynonymous","L60S P149S P169K",3
"lib1","SARS-CoV-2","AAAGTTTCCAATAGTA",1,59.05,6.51,-4.26,0.31,1.5,1.1,0.01,">1 nonsynonymous","G51S Y143R",2
"lib1","SARS-CoV-2","AAAGTTTCTGAATCTA",6,10.81,6.74,-4.03,1.06,1.5,1.14,0.06,">1 nonsynonymous","A89L P96T C102R E141S",4
"lib1","SARS-CoV-2","AAAGTTTCTTAGTCGC",1,18.26,9.8,-0.96,0.11,2.72,1.09,0.01,">1 nonsynonymous","N64E K87L A105M T148H",4
"lib1","SARS-CoV-2","AAAGTTTCTTTCAAAC",2,8.33,10.44,-0.32,0.09,2.87,1.03,0,">1 nonsynonymous","P7K P54N",2
"lib1","SARS-CoV-2","AAAGTTTGAATTTTCT",3,54.2,9.69,-1.08,0.15,1.85,1.07,0.01,">1 nonsynonymous","L5K L60R A67S",3
"lib1","SARS-CoV-2","AAAGTTTGTCCTATCA",2,13.88,6,-4.76,1.52,1.5,1.22,0.05,">1 nonsynonymous","N13S D68G L122Y T148D C158G",5
"lib1","SARS-CoV-2","AAAGTTTGTGTATACG",1,14.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L95S Q144A",2
"lib1","SARS-CoV-2","AAAGTTTTATGCTCCC",3,6.15,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","N4R F8Y P96G V103T",4
"lib1","SARS-CoV-2","AAATAAAAAAACTAGC",1,4.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123R",1
"lib1","SARS-CoV-2","AAATAAAAAACGGGCT",7,203.46,10.68,-0.08,0.04,2.89,1.04,0,">1 nonsynonymous","Y123S K199N",2
"lib1","SARS-CoV-2","AAATAAAAAAGGAATG",5,27.19,9.8,-0.96,0.11,1.95,1.02,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","AAATAAAAAATTCTAT",2,22.82,9.83,-0.93,0.08,2.76,1.03,0,">1 nonsynonymous","N109C N120S G155R",3
"lib1","SARS-CoV-2","AAATAAAAAGTACTGG",2,29.54,10.03,-0.73,0.16,2.3,1,0.01,">1 nonsynonymous","G9C K26V V65T",3
"lib1","SARS-CoV-2","AAATAAAAATAAAAGG",3,40.71,10.51,-0.26,0.07,2.82,1.13,0,">1 nonsynonymous","C31K Q163V",2
"lib1","SARS-CoV-2","AAATAAAAATTAATAC",4,49.84,8.3,-2.46,0.16,2.59,1.17,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","AAATAAAACAAGATCA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y V71T R78S V153N",4
"lib1","SARS-CoV-2","AAATAAAACACGAAAA",4,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F D34N K87R L131A",4
"lib1","SARS-CoV-2","AAATAAAACCTCTCTA",1,17.86,10.6,-0.17,0.11,2.89,1.15,0.01,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","AAATAAAACGGGTCGT",1,24.74,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S36L I72R",2
"lib1","SARS-CoV-2","AAATAAAAGAAATCCC",2,9.24,10.82,0.05,0.05,2.94,1,0,"1 nonsynonymous","S129V",1
"lib1","SARS-CoV-2","AAATAAAAGACAGAGT",1,6,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","R25E T85K W106T V182Y",4
"lib1","SARS-CoV-2","AAATAAAAGTACAACC",4,36.95,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S45W G86E Y159L",3
"lib1","SARS-CoV-2","AAATAAAAGTGACACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107F R136K E141R S147L",4
"lib1","SARS-CoV-2","AAATAAAATAACAAGG",1,38.36,9.77,-0.99,0.1,2.21,1.06,0,">1 nonsynonymous","P7F F134R",2
"lib1","SARS-CoV-2","AAATAAAATACAAGAC",1,17.67,10.49,-0.27,0.11,2.81,1.02,0.01,">1 nonsynonymous","N13T V37E S113A",3
"lib1","SARS-CoV-2","AAATAAAATCAACTGA",1,44.45,10.72,-0.04,0.08,2.96,1.02,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","AAATAAAATCAAGCAA",11,74.33,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","L5V L38T P82Y G86C",4
"lib1","SARS-CoV-2","AAATAAAATCTATAGG",4,12.2,6.59,-4.18,0.39,1.5,1.15,0.02,">1 nonsynonymous","C6R C31W L162H",3
"lib1","SARS-CoV-2","AAATAAAATGCCAAGT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","S41* Y50T K87N K114E C150M",5
"lib1","SARS-CoV-2","AAATAAACAAAGTATT",4,73.06,9.21,-1.55,0.19,1.75,1.19,0.02,">1 nonsynonymous","S139M Q176M L187I",3
"lib1","SARS-CoV-2","AAATAAACAACTAAGA",2,26.4,10.68,-0.09,0.1,2.95,1.01,0,">1 nonsynonymous","C61G L188V",2
"lib1","SARS-CoV-2","AAATAAACACTGTGTG",3,6.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106S P149D P161R",3
"lib1","SARS-CoV-2","AAATAAACAGCCGGAC",1,0.11,NA,NA,NA,NA,NA,NA,"stop","G196*",1
"lib1","SARS-CoV-2","AAATAAACCATATTTG",2,19.85,10.12,-0.64,0.13,2.11,1,0.01,">1 nonsynonymous","W106S K128N",2
"lib1","SARS-CoV-2","AAATAAACCCCCACTC",2,8.46,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","AAATAAACCGAGTCTA",2,33.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61F P133M N151S F156C T170Q",5
"lib1","SARS-CoV-2","AAATAAACCGTGACCT",5,93.67,10.77,0.01,0.08,2.94,1.03,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","AAATAAACGCGGATAA",6,116.26,9.78,-0.98,0.07,2.6,1.06,0,">1 nonsynonymous","C6V G116K L122G",3
"lib1","SARS-CoV-2","AAATAAACTAATCAGT",2,33.44,10.61,-0.16,0.06,2.94,1.03,0,">1 nonsynonymous","Y39H N58D K132L",3
"lib1","SARS-CoV-2","AAATAAACTAGTTTGA",1,25.41,10.05,-0.71,0.2,1.88,1.04,0.02,">1 nonsynonymous","A33T N40R I104W L122V T140C",5
"lib1","SARS-CoV-2","AAATAAACTATCAGTT",3,117.72,10.3,-0.46,0.04,2.69,1.08,0,"1 nonsynonymous","Y123T",1
"lib1","SARS-CoV-2","AAATAAACTCGTATTA",2,23.43,6,-4.76,2,1.82,1.2,0.02,">1 nonsynonymous","R25D N58T G166C",3
"lib1","SARS-CoV-2","AAATAAACTCTTCAAA",4,187.51,10.64,-0.12,0.05,2.88,1.06,0,">1 nonsynonymous","I88V K199F",2
"lib1","SARS-CoV-2","AAATAAAGAAAAGTAT",2,16.92,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I88T L95N Q163R",3
"lib1","SARS-CoV-2","AAATAAAGAAACAAAA",5,116.56,10.79,0.02,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAAAGACAAACAT",3,36.97,8.89,-1.87,0.2,1.73,1.15,0.01,">1 nonsynonymous","Y91H F99Y K198S",3
"lib1","SARS-CoV-2","AAATAAAGCAACGTCG",4,27.13,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","AAATAAAGCCAAATAT",1,5.76,10.69,-0.07,0.12,2.88,1.08,0.01,">1 nonsynonymous","F44L T85S",2
"lib1","SARS-CoV-2","AAATAAAGGAAATTAG",1,10.68,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10I F126P",2
"lib1","SARS-CoV-2","AAATAAAGTATAGGAC",9,43.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N40I L162H",3
"lib1","SARS-CoV-2","AAATAAATAAACAAAG",2,6.96,10.59,-0.17,0.11,2.8,1.1,0.01,"1 nonsynonymous","F44E",1
"lib1","SARS-CoV-2","AAATAAATAACCAAAG",4,55.26,10.58,-0.19,0.05,2.91,1.03,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","AAATAAATAATTGATA",3,41.59,10.85,0.09,0.08,2.86,1.02,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","AAATAAATAGAAACAG",5,72.32,10.72,-0.04,0.03,2.91,1.05,0,">1 nonsynonymous","A42S V173M T201V",3
"lib1","SARS-CoV-2","AAATAAATATACCACA",2,40.94,8.79,-1.97,0.12,2.55,1.12,0.01,">1 nonsynonymous","D90M A145L",2
"lib1","SARS-CoV-2","AAATAAATCGAAAAAT",2,28.06,7.44,-3.32,0.22,1.5,1.09,0.02,">1 nonsynonymous","G86S R127S",2
"lib1","SARS-CoV-2","AAATAAATCTTGGAAT",2,7.37,6.09,-4.67,1.59,1.5,1.14,0.06,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","AAATAAATGGAAAGAC",1,23.89,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","D59V S108N G117H L125M",4
"lib1","SARS-CoV-2","AAATAAATTATTAACT",3,35.98,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S29V C102V N157L P169D",4
"lib1","SARS-CoV-2","AAATAAATTTTTTGAA",8,122.94,10.82,0.06,0.07,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAACAACTCCGTT",1,8.02,10.78,0.02,0.13,2.94,1,0,"1 nonsynonymous","K94H",1
"lib1","SARS-CoV-2","AAATAACAATATGGAA",4,27.04,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N92C Y121N F156I",3
"lib1","SARS-CoV-2","AAATAACACACTATAT",3,15.01,8.4,-2.36,0.15,1.98,1.1,0.01,">1 nonsynonymous","T15I G146K",2
"lib1","SARS-CoV-2","AAATAACAGTGCATGG",3,20.51,8.36,-2.4,0.33,1.5,1.03,0.04,">1 nonsynonymous","F62R G83I N120R",3
"lib1","SARS-CoV-2","AAATAACAGTTTGGTA",2,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S F99R W106S Y121F",4
"lib1","SARS-CoV-2","AAATAACATTCCGTAG",1,33.79,10.25,-0.51,0.07,2.75,1,0,">1 nonsynonymous","F44L D90N D97L",3
"lib1","SARS-CoV-2","AAATAACCAAGCTCAT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I G152M G172M",3
"lib1","SARS-CoV-2","AAATAACCCAAACTGT",2,6.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T A42L L60S V103R S139I G146N",6
"lib1","SARS-CoV-2","AAATAACCCAGCCAAA",3,35.39,9.65,-1.11,0.27,1.5,1.15,0.03,">1 nonsynonymous","T3F K94M Y178F",3
"lib1","SARS-CoV-2","AAATAACCCCTACCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K94L Y119* I142L",3
"lib1","SARS-CoV-2","AAATAACCCTACTGTA",1,10.18,10.24,-0.52,0.29,2.73,1.27,0.08,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","AAATAACCGTCTTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T100L A145F F167*",3
"lib1","SARS-CoV-2","AAATAACCTAAGAAAC",2,16.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6Y T55N V77L G117L F134A I142F N157G T201R",8
"lib1","SARS-CoV-2","AAATAACCTTAAATTG",9,79.85,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V103T W106H G116T L122V F134K S147K",6
"lib1","SARS-CoV-2","AAATAACCTTGCATAC",2,17.26,10.83,0.07,0.08,2.93,1.06,0,"1 nonsynonymous","P197G",1
"lib1","SARS-CoV-2","AAATAACGAAAAAGAG",2,94.89,10.08,-0.68,0.08,2.54,1.03,0,"1 nonsynonymous","A81I",1
"lib1","SARS-CoV-2","AAATAACGAACACTAA",1,52.39,10.24,-0.53,0.05,2.81,1.05,0,">1 nonsynonymous","R16Q V52S",2
"lib1","SARS-CoV-2","AAATAACGAATACCAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K D97L N118L K198E",4
"lib1","SARS-CoV-2","AAATAACGATTAAACC",2,83.11,10.72,-0.04,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAACGCCCGAATA",6,133.77,10.12,-0.65,0.06,2.8,1.01,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","AAATAACGTAATCCTT",14,100.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T V77K",2
"lib1","SARS-CoV-2","AAATAACGTACAGACT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T85* V103M",2
"lib1","SARS-CoV-2","AAATAACGTCAGAGTT",1,13,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","T100L R124T L131F G174S",4
"lib1","SARS-CoV-2","AAATAACGTCCCATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* S41F Y50R P133V G172M",5
"lib1","SARS-CoV-2","AAATAACGTTATATCG",2,33.66,10.11,-0.66,0.09,2.75,1.04,0,">1 nonsynonymous","A105M E141D",2
"lib1","SARS-CoV-2","AAATAACTACACAAGT",5,71.62,8.44,-2.33,0.14,2.76,1.06,0.01,">1 nonsynonymous","N40K F44R L125E",3
"lib1","SARS-CoV-2","AAATAACTACGGTACG",2,14.5,9.85,-0.91,0.15,2.41,1,0.02,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","AAATAACTAGGGACAA",8,52.98,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","A14D S45T V65G I80W",4
"lib1","SARS-CoV-2","AAATAACTAGGTAAAA",2,59.1,NA,NA,NA,NA,NA,NA,"stop","V11T D97L L122* Y159G",4
"lib1","SARS-CoV-2","AAATAACTATCTCACG",4,62.16,10.64,-0.13,0.03,2.93,1.03,0,">1 nonsynonymous","I2H N40P",2
"lib1","SARS-CoV-2","AAATAACTCAAGAAAT",10,7.92,NA,NA,NA,NA,NA,NA,"stop","N4M L131* T148I",3
"lib1","SARS-CoV-2","AAATAACTCATACGTG",1,70.1,10.11,-0.66,0.05,2.92,1,0,">1 nonsynonymous","K87S Y123S",2
"lib1","SARS-CoV-2","AAATAACTTCCTAAAA",13,135.77,10.19,-0.58,0.04,2.95,1.01,0,"1 nonsynonymous","C6V",1
"lib1","SARS-CoV-2","AAATAACTTGAAGAAA",6,85.89,6.29,-4.48,0.57,1.5,1.16,0.02,">1 nonsynonymous","N64L A89T T140F N157S",4
"lib1","SARS-CoV-2","AAATAAGAAATAACTC",9,132.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3K Y39Q L125D F167L",4
"lib1","SARS-CoV-2","AAATAAGAACTACTCG",3,5.86,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y50Q G86S V103R R136Q",4
"lib1","SARS-CoV-2","AAATAAGAATAACCAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","AAATAAGAATAATTAA",23,58.17,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1V A14F G74T G174K T201M",5
"lib1","SARS-CoV-2","AAATAAGACACCACTA",1,75.89,6,-4.76,1.22,1.5,1.21,0.02,">1 nonsynonymous","K56S Y119I Y165D",3
"lib1","SARS-CoV-2","AAATAAGAGCACAGTC",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E L95M N151D F185S",4
"lib1","SARS-CoV-2","AAATAAGATACCAATA",10,49.89,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N157I S184P",2
"lib1","SARS-CoV-2","AAATAAGATACTTAAG",6,1.32,NA,NA,NA,NA,NA,NA,"stop","N1K P7I A81T Y119* C150R",5
"lib1","SARS-CoV-2","AAATAAGATAGATAAA",2,59.67,10.74,-0.02,0.07,2.8,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAAGCAATCCGGC",3,19.57,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N24V D59V P96H Q144G",4
"lib1","SARS-CoV-2","AAATAAGCAGCTAAGT",2,16.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82F",1
"lib1","SARS-CoV-2","AAATAAGCCGAAGACC",1,92.93,9.89,-0.88,0.09,2.02,1.07,0,"1 nonsynonymous","L38E",1
"lib1","SARS-CoV-2","AAATAAGCTAATATAA",7,0.87,NA,NA,NA,NA,NA,NA,"stop","V11W N58L Y119R T148*",4
"lib1","SARS-CoV-2","AAATAAGGAACCATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44S C61W D75W N107Y Y121*",5
"lib1","SARS-CoV-2","AAATAAGGACTCAGTC",1,50.52,10.13,-0.63,0.04,2.9,1.02,0,">1 nonsynonymous","C6N N120A",2
"lib1","SARS-CoV-2","AAATAAGGATGAATAT",7,181.71,8.37,-2.39,0.11,2.73,1.08,0,">1 nonsynonymous","N120E N171D",2
"lib1","SARS-CoV-2","AAATAAGGCGAAAAAG",12,342.92,9.83,-0.94,0.05,2.75,1.06,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","AAATAAGGGAGGTACA",5,80.83,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T85S D98Y C158F",3
"lib1","SARS-CoV-2","AAATAAGGTTTAACAA",4,48.34,8.56,-2.21,0.13,2.39,1.09,0.01,">1 nonsynonymous","D34Q Y119W",2
"lib1","SARS-CoV-2","AAATAAGTACATAACG",1,15.74,10.23,-0.53,0.08,2.81,1,0,">1 nonsynonymous","C6D T140D",2
"lib1","SARS-CoV-2","AAATAAGTAGCTTTAA",2,63.2,10.19,-0.58,0.07,2.65,1,0,">1 nonsynonymous","Q84F H189L",2
"lib1","SARS-CoV-2","AAATAAGTCCCTCGCG",1,25.6,10.71,-0.06,0.11,2.92,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAATAAGTCCGCTTTG",7,89.92,6,-4.76,1.03,1.5,1.17,0.01,">1 nonsynonymous","G9D S19R I28R A81T I142K T148Q",6
"lib1","SARS-CoV-2","AAATAAGTCGACCAAC",4,29.35,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","Y93G",1
"lib1","SARS-CoV-2","AAATAAGTCTCAAAAG",2,45.46,10.84,0.07,0.05,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAAGTGAACTTTC",6,68.55,8.97,-1.8,0.2,1.5,1.08,0.02,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","AAATAAGTGATCTCTT",1,5.58,7.79,-2.97,0.57,1.5,1,0.05,">1 nonsynonymous","L5S A89D",2
"lib1","SARS-CoV-2","AAATAAGTGTGCAAAT",1,26.01,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V11S S19K S45P P54S T148Y Y178K",6
"lib1","SARS-CoV-2","AAATAAGTTCACCCCT",2,28.71,7.49,-3.27,0.2,1.73,1.12,0.01,">1 nonsynonymous","I2H A22I C61R G117F",4
"lib1","SARS-CoV-2","AAATAAGTTTGTTTTG",7,43.4,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N4F L95R P149S",3
"lib1","SARS-CoV-2","AAATAATAAAAAATTC",4,47.04,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I2T W23G K56W",3
"lib1","SARS-CoV-2","AAATAATAAATGCCAC",3,90.83,7.76,-3.01,0.12,2.06,1.16,0,">1 nonsynonymous","I2E C158L P197L",3
"lib1","SARS-CoV-2","AAATAATAACCGTATA",1,1.09,NA,NA,NA,NA,NA,NA,"stop","P7V G152V G174*",3
"lib1","SARS-CoV-2","AAATAATACAACAATA",11,98.37,10.44,-0.33,0.04,2.93,1.02,0,">1 nonsynonymous","N58I N120R",2
"lib1","SARS-CoV-2","AAATAATACCCGACGC",3,121.55,10.5,-0.26,0.06,2.91,1.01,0,">1 nonsynonymous","F134R K198R",2
"lib1","SARS-CoV-2","AAATAATAGAAATATA",3,236.17,9.81,-0.95,0.08,1.98,1.05,0,">1 nonsynonymous","K56I K94Q S200C",3
"lib1","SARS-CoV-2","AAATAATAGATAGATA",2,9.7,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","T46M Y91D S113H R136L",4
"lib1","SARS-CoV-2","AAATAATAGGTCCTCC",1,12.27,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F12S F62S R78T N107L F160V",5
"lib1","SARS-CoV-2","AAATAATATAAATCCA",1,44.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120P Y165W",2
"lib1","SARS-CoV-2","AAATAATATACGGACT",1,10.34,8.67,-2.1,0.19,2.95,1.14,0.01,">1 nonsynonymous","P7D T55E Y119C G152T",4
"lib1","SARS-CoV-2","AAATAATATATCACCA",5,55.18,9.97,-0.8,0.06,2.7,1.05,0,">1 nonsynonymous","L38M G116F T201F",3
"lib1","SARS-CoV-2","AAATAATATCTGCTGC",17,85.64,6.16,-4.6,0.55,1.5,1.19,0.01,">1 nonsynonymous","Y123L C158P L183H G196L",4
"lib1","SARS-CoV-2","AAATAATATGGGGCAC",2,44.74,7.08,-3.69,0.28,1.5,1.15,0.02,">1 nonsynonymous","S41P Y143R",2
"lib1","SARS-CoV-2","AAATAATCAACAACCG",9,120.19,6.31,-4.46,0.69,1.5,1.23,0.03,">1 nonsynonymous","C61Y K94S L162V",3
"lib1","SARS-CoV-2","AAATAATCACTCGACC",3,8.51,10.69,-0.08,0.06,2.97,1,0,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","AAATAATCAGATAAGA",4,24.06,6,-4.76,2,3,1.09,0,">1 nonsynonymous","R73W T100P G146C P169I",4
"lib1","SARS-CoV-2","AAATAATCCACATTTT",10,141.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41R L60H G172T",3
"lib1","SARS-CoV-2","AAATAATCGCAAAAAT",4,55.46,10.7,-0.06,0.04,2.93,1,0,">1 nonsynonymous","I2Q S29F",2
"lib1","SARS-CoV-2","AAATAATGCACAGACA",2,9.2,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I88R L95G Y121Q K128H",4
"lib1","SARS-CoV-2","AAATAATGCGACACAC",1,7.04,9.54,-1.22,0.31,2.26,1.05,0.04,">1 nonsynonymous","N1R A14S N58T T148P",4
"lib1","SARS-CoV-2","AAATAATGCTAATACT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H K198Q",2
"lib1","SARS-CoV-2","AAATAATGCTCCTACA",11,77.46,6.35,-4.42,0.41,1.5,1.19,0.02,">1 nonsynonymous","E10F D34Y I80L Q84L",4
"lib1","SARS-CoV-2","AAATAATGGTGTACAT",4,111.62,10.37,-0.4,0.04,2.9,1.01,0,">1 nonsynonymous","G9F Q84M V182I",3
"lib1","SARS-CoV-2","AAATAATGTGTATATA",7,44.72,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","Y66S T170Q L183T",3
"lib1","SARS-CoV-2","AAATAATGTTCTTCAG",3,87.14,10.18,-0.59,0.08,2.71,1.05,0,">1 nonsynonymous","T3L D34S S129R",3
"lib1","SARS-CoV-2","AAATAATTAAGATAAA",5,53.47,10.85,0.09,0.07,2.93,1.06,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","AAATAATTAATGGTTC",1,50.71,10.74,-0.03,0.08,2.63,1.32,0,"1 nonsynonymous","E154Q",1
"lib1","SARS-CoV-2","AAATAATTAGCACTAG",2,12.68,10.49,-0.28,0.1,2.98,1,0,"1 nonsynonymous","F62G",1
"lib1","SARS-CoV-2","AAATAATTAGTGACTG",1,6.07,10.79,0.03,0.04,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAATTATGAAGAC",6,557.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31L D68M",2
"lib1","SARS-CoV-2","AAATAATTCTATTGCC",4,27.63,10.64,-0.12,0.03,2.96,1.03,0,">1 nonsynonymous","T3M N4P A14S",3
"lib1","SARS-CoV-2","AAATAATTCTCACGTA",3,132.75,10.64,-0.13,0.03,2.92,1.03,0,"1 nonsynonymous","L111F",1
"lib1","SARS-CoV-2","AAATAATTGCAAATCA",2,51.14,8.69,-2.07,0.29,1.5,1,0.04,">1 nonsynonymous","V37L S41E S69L R78L",4
"lib1","SARS-CoV-2","AAATAATTGCCGATAA",7,39.99,10.11,-0.65,0.11,2.46,1,0.01,"1 nonsynonymous","L131F",1
"lib1","SARS-CoV-2","AAATAATTTCAGAAAA",4,85.73,8.32,-2.45,0.26,1.5,1.21,0.02,">1 nonsynonymous","A14I L38N T55Y Y178W",4
"lib1","SARS-CoV-2","AAATACAAAAACTACT",2,5.26,8.13,-2.64,0.13,2.95,1.06,0.01,">1 nonsynonymous","A18H Y143A",2
"lib1","SARS-CoV-2","AAATACAAAACACACT",7,35.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D F44L P82C W106V",4
"lib1","SARS-CoV-2","AAATACAAAACTGTTT",11,0.02,NA,NA,NA,NA,NA,NA,"stop","F8L S29M L57R D90F Q144* T170S",6
"lib1","SARS-CoV-2","AAATACAAACATACGG",2,19.59,10.24,-0.53,0.07,2.89,1.07,0,">1 nonsynonymous","N4K L5M F156S",3
"lib1","SARS-CoV-2","AAATACAAACCCAACT",8,18,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V77M L95R C158N",3
"lib1","SARS-CoV-2","AAATACAAACCCGGTT",5,40.37,10.77,0.01,0.09,2.96,1.03,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","AAATACAAATCATAAC",5,61.56,10.24,-0.53,0.04,2.82,1.01,0,"1 nonsynonymous","P133H",1
"lib1","SARS-CoV-2","AAATACAACACCACGT",5,5.69,NA,NA,NA,NA,NA,NA,"stop","P133R A145* S184R",3
"lib1","SARS-CoV-2","AAATACAACCAAGTAA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P K94Y Y121E",3
"lib1","SARS-CoV-2","AAATACAACCATCATT",2,47.48,10.78,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATACAACCATTCAG",2,11.09,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15G S36Q R78L Y121T K128S F134M",6
"lib1","SARS-CoV-2","AAATACAACCTCTGTT",3,40.93,9.82,-0.94,0.11,2.23,1.06,0.01,">1 nonsynonymous","V77M P149H F160V T201A",4
"lib1","SARS-CoV-2","AAATACAACGTCGTCA",1,29.08,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","I104T Y175L",2
"lib1","SARS-CoV-2","AAATACAAGAAACGGT",2,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T C102S E135S L183R",4
"lib1","SARS-CoV-2","AAATACAAGAAATCAA",2,0.72,NA,NA,NA,NA,NA,NA,"stop","G9V A22Y L38I G146*",4
"lib1","SARS-CoV-2","AAATACAAGAATTCTT",2,70.24,8.04,-2.72,0.19,1.75,1.12,0.01,"1 nonsynonymous","Q176Y",1
"lib1","SARS-CoV-2","AAATACAAGCCATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39Q F62T D68T F156L Y175* T201Y",6
"lib1","SARS-CoV-2","AAATACAAGGATCGTA",6,39.07,10.77,0.01,0.08,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATACACAACACCCC",2,36.06,9.6,-1.16,0.14,1.91,1.12,0.01,">1 nonsynonymous","G9D S45I I88V D97S",4
"lib1","SARS-CoV-2","AAATACACATTATGAA",1,20.42,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","C49Q Y178L",2
"lib1","SARS-CoV-2","AAATACACCAGCATCA",2,25.91,7.64,-3.13,0.22,1.8,1.2,0.01,">1 nonsynonymous","W106V G117A",2
"lib1","SARS-CoV-2","AAATACACCCGTCCGC",2,0.91,NA,NA,NA,NA,NA,NA,"stop","Y21* A33R R127S",3
"lib1","SARS-CoV-2","AAATACACGTGAAAAT",5,27.61,6.67,-4.09,0.23,1.95,1.11,0.01,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","AAATACACTCCCCCCT",3,24.18,8.45,-2.31,0.16,2.02,1.06,0.01,">1 nonsynonymous","T3N E10R N110M N120P",4
"lib1","SARS-CoV-2","AAATACACTTAGAAAG",2,35.23,10.18,-0.58,0.11,2.08,1,0.01,">1 nonsynonymous","F62V T100W V182C",3
"lib1","SARS-CoV-2","AAATACAGACTAGAAC",2,23.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V77L Y91P F156V",3
"lib1","SARS-CoV-2","AAATACAGCACTCGAA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","Y35* S53R Y121* H189Y",4
"lib1","SARS-CoV-2","AAATACAGTTTGTCAA",3,19.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C G117T S184L",3
"lib1","SARS-CoV-2","AAATACATACGACACC",6,77.63,10.18,-0.58,0.06,2.73,1.04,0,">1 nonsynonymous","Y39D T100S T201R",3
"lib1","SARS-CoV-2","AAATACATAGTTGGAG",8,65.56,10.76,0,0.04,2.92,1.04,0,">1 nonsynonymous","Y35M T55P S129R",3
"lib1","SARS-CoV-2","AAATACATATACCCAT",1,6.2,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y93F T100I A105V P149S N171I",5
"lib1","SARS-CoV-2","AAATACATATGCATCC",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T D112V R127S",3
"lib1","SARS-CoV-2","AAATACATTACATGTG",1,35.75,10.63,-0.13,0.06,2.93,1.03,0,">1 nonsynonymous","N4T A33L",2
"lib1","SARS-CoV-2","AAATACATTCGAATGG",5,61.65,7.41,-3.36,0.24,1.5,1.14,0.02,">1 nonsynonymous","S41V N107I",2
"lib1","SARS-CoV-2","AAATACATTCTCCGCC",3,2.74,NA,NA,NA,NA,NA,NA,"stop","Q79* P96* V115F E186F",4
"lib1","SARS-CoV-2","AAATACCAAATGTCTT",2,7.01,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T15M I88R",2
"lib1","SARS-CoV-2","AAATACCAACAGATTG",5,0.4,NA,NA,NA,NA,NA,NA,"stop","A42N F62S S69N Q84Y P161* L183T G196W",7
"lib1","SARS-CoV-2","AAATACCAAGTAATGT",4,87.38,10.28,-0.48,0.04,2.82,1,0,">1 nonsynonymous","N1V S41L N110I",3
"lib1","SARS-CoV-2","AAATACCAATGCACCG",1,49.55,10.53,-0.23,0.05,2.92,1.03,0,">1 nonsynonymous","V32F V52C",2
"lib1","SARS-CoV-2","AAATACCACGTACCCT",8,150.81,10.43,-0.34,0.03,2.9,1.04,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","AAATACCAGCGTGAGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAATACCATATTCTAA",1,38.25,10.79,0.02,0.06,2.91,1.03,0,"1 nonsynonymous","V173C",1
"lib1","SARS-CoV-2","AAATACCATTCCCGAA",3,24.18,9.13,-1.63,0.17,1.92,1.06,0.01,"1 nonsynonymous","G74L",1
"lib1","SARS-CoV-2","AAATACCCAAAACAGA",5,17.32,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","C150Y L162D",2
"lib1","SARS-CoV-2","AAATACCCAATTCCTT",3,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M A42F F167W",3
"lib1","SARS-CoV-2","AAATACCCACCTTATA",3,0.01,NA,NA,NA,NA,NA,NA,"stop","V65* D98Y F185M",3
"lib1","SARS-CoV-2","AAATACCCAGACTGCA",5,41.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K48W G101C Y121S Q144H C150L",5
"lib1","SARS-CoV-2","AAATACCCATCACACG",4,44.72,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51S V103M H189S",3
"lib1","SARS-CoV-2","AAATACCGAAACAGAA",1,45.01,10.75,-0.02,0.1,2.88,1.07,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","AAATACCTAAACTATT",3,70.45,10.55,-0.22,0.05,2.86,1.03,0,">1 nonsynonymous","E141Q F160L",2
"lib1","SARS-CoV-2","AAATACCTACTACACA",1,53.44,10.78,0.02,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATACCTAGAGATAT",2,0.38,NA,NA,NA,NA,NA,NA,"stop","Y91V N107* E135I G155V",4
"lib1","SARS-CoV-2","AAATACCTAGTGAGAA",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L E135L",2
"lib1","SARS-CoV-2","AAATACGAAACATATT",4,36.81,6.23,-4.54,0.63,1.5,1.14,0.02,">1 nonsynonymous","T3P V20N F44K L122P G152S",5
"lib1","SARS-CoV-2","AAATACGAAACCACAC",5,1.27,NA,NA,NA,NA,NA,NA,"stop","S41* V103R",2
"lib1","SARS-CoV-2","AAATACGAACAATAAT",11,104.14,10.71,-0.05,0.06,2.92,1.05,0,"1 nonsynonymous","P54L",1
"lib1","SARS-CoV-2","AAATACGAATATTTTT",2,7.46,8.62,-2.15,0.31,2.34,1.07,0.08,">1 nonsynonymous","N110K S139L Y159I H189D",4
"lib1","SARS-CoV-2","AAATACGAGACAATGC",2,27.12,6,-4.76,2,3,1.14,0,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","AAATACGATTTCACCG",5,41.95,10.23,-0.53,0.08,2.69,1.03,0,">1 nonsynonymous","G9D S29R Q79R",3
"lib1","SARS-CoV-2","AAATACGCCTAAACAT",1,19.75,10.27,-0.49,0.1,3,1,0,">1 nonsynonymous","S45P G174N",2
"lib1","SARS-CoV-2","AAATACGCGCGATGTC",1,36.02,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","R25L K56S I142E",3
"lib1","SARS-CoV-2","AAATACGCTATCCATA",6,81.16,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T140A Y165V T170L Y175F",4
"lib1","SARS-CoV-2","AAATACGCTCATCCAT",2,17.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34E S53R E141D C158S",4
"lib1","SARS-CoV-2","AAATACGCTGGGGAAC",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25D K87M K94F N118P Q176C",5
"lib1","SARS-CoV-2","AAATACGGAAATAGAG",1,31.25,10.74,-0.02,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATACGGACTCATGA",7,33.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V153I F167T G174M",3
"lib1","SARS-CoV-2","AAATACGTAATAGCCT",2,58.48,9.21,-1.55,0.28,1.56,1.14,0.03,">1 nonsynonymous","V37L P96W",2
"lib1","SARS-CoV-2","AAATACGTCAGGGGTG",1,18.05,10.63,-0.14,0.03,2.98,1,0,">1 nonsynonymous","T63S D98T",2
"lib1","SARS-CoV-2","AAATACGTTGATATGA",1,10.05,10.73,-0.03,0.15,3,1.01,0.01,"1 nonsynonymous","T148D",1
"lib1","SARS-CoV-2","AAATACTAAAAAGACT",1,12.5,10.22,-0.54,0.14,2.69,1,0.01,">1 nonsynonymous","Y21S S29H",2
"lib1","SARS-CoV-2","AAATACTAAATAAAAC",13,157.58,10.51,-0.26,0.03,2.89,1.01,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","AAATACTAACTAAATT",1,0.45,NA,NA,NA,NA,NA,NA,"stop","K94N S113* K128H P149S",4
"lib1","SARS-CoV-2","AAATACTAATCGTGCT",7,51.62,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","V37G C61M I88S F99Y",4
"lib1","SARS-CoV-2","AAATACTACAATACTA",1,42.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37L Y50I P82L N130C R136L I142S",6
"lib1","SARS-CoV-2","AAATACTACTGACCCA",1,12.6,6,-4.76,2,3,1.08,0,">1 nonsynonymous","R16P S139N C158L",3
"lib1","SARS-CoV-2","AAATACTATACATCTG",4,44.25,10.35,-0.41,0.07,2.82,1.08,0,">1 nonsynonymous","F62S V77L T140H",3
"lib1","SARS-CoV-2","AAATACTATCAATTTC",3,22.66,10.07,-0.7,0.09,2.84,1.04,0.01,"1 nonsynonymous","R73S",1
"lib1","SARS-CoV-2","AAATACTATGGCAATA",10,263.91,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R16S D68W Y175L",3
"lib1","SARS-CoV-2","AAATACTCAAAACACT",4,116.33,10.32,-0.45,0.05,2.87,1,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","AAATACTCATGCGATA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M C61S Q84F K87D D97H F160N",6
"lib1","SARS-CoV-2","AAATACTGCACCTTTA",4,151.08,10.17,-0.59,0.04,2.82,1,0,">1 nonsynonymous","F44S N64D",2
"lib1","SARS-CoV-2","AAATACTGCCAGGACG",1,36.37,6.76,-4.01,0.6,1.5,1.17,0.07,">1 nonsynonymous","S29I L57R N92M",3
"lib1","SARS-CoV-2","AAATACTGGCCAACAA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","A42G N109L Y165*",3
"lib1","SARS-CoV-2","AAATACTTAACATCGG",2,36.87,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F99P R127K",2
"lib1","SARS-CoV-2","AAATACTTATCATCAC",7,49.81,10.51,-0.26,0.08,2.91,1.06,0,">1 nonsynonymous","V37Y D59M S129E",3
"lib1","SARS-CoV-2","AAATACTTATGTGGAA",6,20.57,9.23,-1.54,0.18,2.03,1.13,0.01,">1 nonsynonymous","A42L P96M",2
"lib1","SARS-CoV-2","AAATACTTCATACATT",5,55.95,10.7,-0.06,0.05,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAGAAAAATGTAT",2,54,10.8,0.04,0.09,2.92,1.04,0,"1 nonsynonymous","K198A",1
"lib1","SARS-CoV-2","AAATAGAAAATCTAAA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","K26* T55F E141D K198S",4
"lib1","SARS-CoV-2","AAATAGAAACAGAGTA",1,5.93,6.39,-4.37,0.72,1.5,1.22,0.05,">1 nonsynonymous","G9M S43Y Q84M I104K",4
"lib1","SARS-CoV-2","AAATAGAAACAGCTAA",6,28.58,6.67,-4.1,0.56,1.5,1.23,0.05,">1 nonsynonymous","A89D T100H",2
"lib1","SARS-CoV-2","AAATAGAAACTCTAAA",3,8.34,10.67,-0.1,0.51,2.18,1,0.07,">1 nonsynonymous","I2T N13S G51V G83D K94A G152F",6
"lib1","SARS-CoV-2","AAATAGAAAGAAAGTG",5,71.12,10.69,-0.07,0.05,2.96,1.04,0,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","AAATAGAAATACTAGC",6,169.73,9.24,-1.53,0.06,2.73,1.1,0,">1 nonsynonymous","L122Q A145T G152Y N171S",4
"lib1","SARS-CoV-2","AAATAGAAATGAATGA",2,35.63,9.84,-0.92,0.13,1.83,1.08,0.01,">1 nonsynonymous","I2Q L38A E141I K198T",4
"lib1","SARS-CoV-2","AAATAGAAATGGACGG",6,60.89,9.52,-1.24,0.13,2.25,1.06,0,">1 nonsynonymous","L60S N107P E141L",3
"lib1","SARS-CoV-2","AAATAGAACGAAATCT",3,16.97,9.89,-0.88,0.27,1.86,1.02,0.03,">1 nonsynonymous","L57R T100W",2
"lib1","SARS-CoV-2","AAATAGAAGCTTAGCA",3,44.25,9.23,-1.53,0.16,2.52,1.14,0.01,">1 nonsynonymous","V77L N120S G152R P169L",4
"lib1","SARS-CoV-2","AAATAGAATAATGCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","I142* G174R",2
"lib1","SARS-CoV-2","AAATAGAATACAAACA",1,58.47,10.38,-0.38,0.06,2.89,1.03,0,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","AAATAGACAAAGTAGG",1,7.09,9.89,-0.87,0.23,2.42,1.09,0.01,">1 nonsynonymous","T3L A14L",2
"lib1","SARS-CoV-2","AAATAGACAATTCGCA",3,11.02,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12K K48S D98F",3
"lib1","SARS-CoV-2","AAATAGACCACGACAA",6,46.69,9.79,-0.97,0.06,2.77,1.1,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","AAATAGACCACGACAG",2,37.25,6,-4.76,1.26,1.5,1.16,0.02,">1 nonsynonymous","D90L F167E",2
"lib1","SARS-CoV-2","AAATAGACCTAATCGA",4,53.5,10.85,0.09,0.07,2.98,1,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","AAATAGACGGTGTTTC",3,21.44,10.63,-0.13,0.06,2.99,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAGACTCACGACA",1,41.2,10.49,-0.28,0.07,2.89,1.04,0,">1 nonsynonymous","P7W A42R",2
"lib1","SARS-CoV-2","AAATAGACTCCCAATA",5,51.02,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T55S D90H Y143S N151S S164F T201Y",6
"lib1","SARS-CoV-2","AAATAGAGACAGCATA",4,72.22,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","C6W P177N",2
"lib1","SARS-CoV-2","AAATAGAGACCCAACG",3,76.04,8.35,-2.41,0.12,2.51,1.09,0.01,">1 nonsynonymous","G83Y E141S N157L",3
"lib1","SARS-CoV-2","AAATAGAGTAAAATGA",3,9.35,9.17,-1.6,0.06,2.93,1.07,0,">1 nonsynonymous","A22K G117T",2
"lib1","SARS-CoV-2","AAATAGATAAAAAGGT",4,21.92,10.72,-0.05,0.13,2.86,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAATAGATACCGATTT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","S43V K48A D90* N110D S184Y",5
"lib1","SARS-CoV-2","AAATAGATACTGTTAG",2,8.34,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12T C49R V153S V173M",4
"lib1","SARS-CoV-2","AAATAGATGGTAAGAA",5,15.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P54Y F70Y T100S",3
"lib1","SARS-CoV-2","AAATAGATTACGTTCG",5,67.05,10.77,0,0.11,2.78,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAGATTATGACGT",6,96.88,9.89,-0.87,0.09,2.34,1.03,0,">1 nonsynonymous","A22R L60P Y66M",3
"lib1","SARS-CoV-2","AAATAGATTCGTATGG",3,74.29,8.17,-2.59,0.18,2.19,1.13,0.01,"1 nonsynonymous","Q176D",1
"lib1","SARS-CoV-2","AAATAGATTGGGGATA",3,79.86,10.71,-0.05,0.08,2.86,1.07,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","AAATAGATTTCAGCTT",2,24.02,9.26,-1.5,0.08,2.8,1.12,0,">1 nonsynonymous","L5R S41L T170Y",3
"lib1","SARS-CoV-2","AAATAGCAAGAGAAAA",9,62.71,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N1I F8V F62S A105V F134T",5
"lib1","SARS-CoV-2","AAATAGCAATTAATAT",4,0.8,NA,NA,NA,NA,NA,NA,"stop","G83C P149*",2
"lib1","SARS-CoV-2","AAATAGCACAATAAAA",5,46.33,8.34,-2.42,0.42,1.5,1,0.06,">1 nonsynonymous","T15I Y39L L60S F99S L131I T148S C158I",7
"lib1","SARS-CoV-2","AAATAGCAGATTAACA",3,69.2,9.93,-0.83,0.05,2.69,1.06,0,">1 nonsynonymous","C6Y I138L N151F V173I S200F",5
"lib1","SARS-CoV-2","AAATAGCCAACCACTA",2,57.57,10.84,0.08,0.05,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATAGCCACAAAGAC",3,5.46,7.88,-2.89,0.72,1.5,1,0.04,">1 nonsynonymous","Y50T W106D N151P P191L",4
"lib1","SARS-CoV-2","AAATAGCCACAATTCA",1,46.63,9.42,-1.34,0.17,1.6,1.13,0.01,">1 nonsynonymous","D68H A81Q F160A",3
"lib1","SARS-CoV-2","AAATAGCCCACTATAT",5,50.23,10.26,-0.51,0.06,2.92,1.01,0,">1 nonsynonymous","E10T S139A",2
"lib1","SARS-CoV-2","AAATAGCCTCAGATCA",5,48.92,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P7L R16I P54D R73F V194I",5
"lib1","SARS-CoV-2","AAATAGCGATGCACCA",9,88.01,6,-4.76,1,1.5,1.14,0.01,">1 nonsynonymous","R27M Y35R K94A E154D",4
"lib1","SARS-CoV-2","AAATAGCGCAGAAGGG",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129F E154R",2
"lib1","SARS-CoV-2","AAATAGCGCAGGGACT",1,12.72,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G83F N107L P161G",3
"lib1","SARS-CoV-2","AAATAGCTACCACAGG",3,26.21,10.66,-0.1,0.11,2.91,1.02,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","AAATAGCTCTATAACG",1,50.44,10.75,-0.01,0.1,2.86,1.09,0,">1 nonsynonymous","I2A T100F",2
"lib1","SARS-CoV-2","AAATAGCTGATCGGGG",7,4.01,NA,NA,NA,NA,NA,NA,"stop","G9R F47* N107K Y119C",4
"lib1","SARS-CoV-2","AAATAGGAAGTCTAAA",6,50.13,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91V R127H I142C",3
"lib1","SARS-CoV-2","AAATAGGACTGTCCAG",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I K56M D98K A145C T201C",5
"lib1","SARS-CoV-2","AAATAGGCACACTAAG",3,90.02,7.39,-3.38,0.18,1.67,1.16,0.01,">1 nonsynonymous","T100S Y143R",2
"lib1","SARS-CoV-2","AAATAGGCGAAAGACT",11,96.35,8.67,-2.09,0.17,1.5,1.07,0.01,">1 nonsynonymous","R16V N107M G152F K198N",4
"lib1","SARS-CoV-2","AAATAGGCTCCTACTG",3,13.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89L G152Y C158R",3
"lib1","SARS-CoV-2","AAATAGGGATTAGGAG",2,38.37,6.72,-4.05,0.34,1.5,1.12,0.03,">1 nonsynonymous","I2M G86K P169A",3
"lib1","SARS-CoV-2","AAATAGGGTAGAAGAC",5,0,NA,NA,NA,NA,NA,NA,"stop","S19R V37T N64D T100* G152D N171Q",6
"lib1","SARS-CoV-2","AAATAGGTACTCCAAA",6,77.9,7.17,-3.59,0.22,1.5,1.14,0.01,">1 nonsynonymous","W23A F44D F47L S129H",4
"lib1","SARS-CoV-2","AAATAGGTGGAGCTGA",8,134.83,10.83,0.06,0.07,2.9,1.05,0,">1 nonsynonymous","I2S R27T F160S",3
"lib1","SARS-CoV-2","AAATAGTAAGCACAGT",3,0.8,NA,NA,NA,NA,NA,NA,"stop","A14* L57V P82S",3
"lib1","SARS-CoV-2","AAATAGTAATGCGAAA",2,13.98,10.81,0.05,0.18,2.79,1.07,0.01,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","AAATAGTACCCCATGT",1,11.24,10.62,-0.14,0.12,2.63,1.07,0.01,">1 nonsynonymous","G83F D90Y",2
"lib1","SARS-CoV-2","AAATAGTACGGACTGG",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P D98S",2
"lib1","SARS-CoV-2","AAATAGTAGAAACATT",12,2.74,NA,NA,NA,NA,NA,NA,"stop","C6Y S36G L60* L131P G196V",5
"lib1","SARS-CoV-2","AAATAGTATAACATGC",3,28.27,9.1,-1.66,0.25,1.5,1.08,0.03,">1 nonsynonymous","S41A F44I V52P N120M",4
"lib1","SARS-CoV-2","AAATAGTCAACCGATA",9,62.12,6.05,-4.72,0.94,1.5,1.12,0.01,">1 nonsynonymous","L5A C49H C61V D97C S139R",5
"lib1","SARS-CoV-2","AAATAGTGATGATAAA",8,19.63,6.73,-4.04,0.3,1.5,1.02,0.02,">1 nonsynonymous","Q79G Y121L R179G",3
"lib1","SARS-CoV-2","AAATAGTGCTAACGGG",5,39.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P7L N64G E135P",3
"lib1","SARS-CoV-2","AAATAGTGGATATCCC",6,38.86,6,-4.76,1.83,1.5,1.18,0.01,">1 nonsynonymous","R27V I72G D90H T100C V103L V173G",6
"lib1","SARS-CoV-2","AAATAGTTAAAACCAG",2,2.92,NA,NA,NA,NA,NA,NA,"stop","A81S D98* Y119L R124T",4
"lib1","SARS-CoV-2","AAATAGTTAATTATAA",7,54.65,10.47,-0.29,0.07,2.85,1.02,0,">1 nonsynonymous","R27E C61R Q84R",3
"lib1","SARS-CoV-2","AAATAGTTACCCCAAC",2,42.35,9.75,-1.02,0.12,1.83,1.12,0.01,">1 nonsynonymous","N13Y S139C",2
"lib1","SARS-CoV-2","AAATAGTTCTGGCCTT",5,24.05,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G101D Y121A",2
"lib1","SARS-CoV-2","AAATAGTTGACGTATA",7,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V N107R S129M T170F",4
"lib1","SARS-CoV-2","AAATAGTTGAGAAGTA",2,57.06,10.04,-0.72,0.09,2.93,1,0,">1 nonsynonymous","T170F P197V",2
"lib1","SARS-CoV-2","AAATATAAAAAGAAAC",3,1.85,NA,NA,NA,NA,NA,NA,"stop","L60* I88H",2
"lib1","SARS-CoV-2","AAATATAAAAATAATG",5,61.67,10.77,0.01,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATATAAACGCCACC",2,89.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y119R Y175P",2
"lib1","SARS-CoV-2","AAATATAAAGAATGCT",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62C T100I G117H",3
"lib1","SARS-CoV-2","AAATATAAATCGAAAT",1,42.2,10.77,0,0.07,2.99,1,0,">1 nonsynonymous","F62C P197S",2
"lib1","SARS-CoV-2","AAATATAAATTGTATT",5,5.53,7.47,-3.29,1.21,1.5,1.08,0.04,">1 nonsynonymous","T170M V182S H189N",3
"lib1","SARS-CoV-2","AAATATAAATTTCGGT",5,97.66,7.22,-3.55,0.37,1.5,1.14,0.04,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","AAATATAACATTGTGA",4,62.2,10.2,-0.57,0.06,2.94,1.01,0,">1 nonsynonymous","L38F K87S",2
"lib1","SARS-CoV-2","AAATATAACCGCCCAA",3,7.83,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V37L N107M C158T",3
"lib1","SARS-CoV-2","AAATATAACTTAATAT",3,23.68,9.19,-1.58,0.2,1.56,1.13,0.04,">1 nonsynonymous","L5T Y35H I72L Q84Y",4
"lib1","SARS-CoV-2","AAATATAAGAATCGAA",3,33.57,7.08,-3.68,0.3,1.5,1.13,0.02,">1 nonsynonymous","C49L G116T F156Y",3
"lib1","SARS-CoV-2","AAATATAAGCCCTGTG",1,64.58,10.79,0.02,0.09,2.79,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATATAAGGCATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101C N107V Q168H",3
"lib1","SARS-CoV-2","AAATATAAGGTAAGAT",2,35.02,10.34,-0.43,0.05,2.89,1,0,"1 nonsynonymous","Y35G",1
"lib1","SARS-CoV-2","AAATATAATAACTTAG",6,28.41,8.41,-2.36,0.26,1.5,1.15,0.03,">1 nonsynonymous","N4V N13D S139M",3
"lib1","SARS-CoV-2","AAATATAATATTCAAA",5,123.46,9.96,-0.8,0.1,2.36,1.04,0,">1 nonsynonymous","K48N L57G N64V N171I",4
"lib1","SARS-CoV-2","AAATATAATGATGCTA",4,52.6,10.7,-0.06,0.08,2.92,1.04,0,"1 nonsynonymous","S43C",1
"lib1","SARS-CoV-2","AAATATAATGTTCCTA",1,12.97,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A14P G51T L131C",3
"lib1","SARS-CoV-2","AAATATAATTAATACC",1,44.07,6.61,-4.16,0.69,1.5,1.07,0.06,">1 nonsynonymous","N107M Y119M F126Q",3
"lib1","SARS-CoV-2","AAATATAATTTTTAAT",1,26.01,9.41,-1.35,0.18,1.92,1.11,0.02,">1 nonsynonymous","P82I Q168A G174R",3
"lib1","SARS-CoV-2","AAATATACACATATTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N24H E141M Q163* P177K",4
"lib1","SARS-CoV-2","AAATATACCATAAAGC",1,13.17,10.64,-0.13,0.12,3,1.02,0,">1 nonsynonymous","E10T A192T",2
"lib1","SARS-CoV-2","AAATATACCTGCCCTG",2,21.38,6,-4.76,2,3,1.3,0.02,">1 nonsynonymous","T15G W23L G101L A105P R127C",5
"lib1","SARS-CoV-2","AAATATACGCACCTAA",2,18.51,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10C C102V S147L",3
"lib1","SARS-CoV-2","AAATATACGTCGTCAT",4,0.4,NA,NA,NA,NA,NA,NA,"stop","A14G T55* V103Q",3
"lib1","SARS-CoV-2","AAATATACTATATAAC",3,70.67,9.73,-1.03,0.13,2.5,1.03,0.01,">1 nonsynonymous","C61D R136L T148F",3
"lib1","SARS-CoV-2","AAATATACTCCTACGC",1,8.54,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","G83R V103Y R124V",3
"lib1","SARS-CoV-2","AAATATAGAAAGCAAT",6,58.33,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T3V K56L P133R Y165I",4
"lib1","SARS-CoV-2","AAATATAGAATTAGGC",2,59.96,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","D137N Y143Q T148R L183I",4
"lib1","SARS-CoV-2","AAATATAGAGGTATAC",4,0.85,NA,NA,NA,NA,NA,NA,"stop","V32L R127*",2
"lib1","SARS-CoV-2","AAATATAGCATAGTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75N D90S S129C D137Y",4
"lib1","SARS-CoV-2","AAATATAGTTAACTAC",9,275.55,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","P149I G172L",2
"lib1","SARS-CoV-2","AAATATAGTTCTGGAA",11,127.56,10.71,-0.05,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATATATAAGGAATT",2,17.23,9.63,-1.13,0.48,1.53,1.12,0.08,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","AAATATATACTGATCG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","A89T N151* Y175D",3
"lib1","SARS-CoV-2","AAATATATGACTTACA",5,29.15,10,-0.77,0.17,1.91,1.06,0.01,">1 nonsynonymous","A14Y K56L",2
"lib1","SARS-CoV-2","AAATATATGGCATTTA",3,5.1,7.68,-3.09,0.55,2.68,1.22,0.04,">1 nonsynonymous","A14W A42H K48Y P82T W106N I142N G146L",7
"lib1","SARS-CoV-2","AAATATATTAGGTCCT",3,33.45,10.53,-0.23,0.05,2.9,1.05,0,">1 nonsynonymous","N24G Y39R",2
"lib1","SARS-CoV-2","AAATATATTATCTAGG",7,98.11,10.12,-0.64,0.07,2.79,1.01,0,">1 nonsynonymous","G9C N118S Q168F",3
"lib1","SARS-CoV-2","AAATATATTGAGTAAG",5,32.45,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5F N107K C150S C158R",4
"lib1","SARS-CoV-2","AAATATATTTTAAGTG",5,14.9,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44Q V103K G146A G166L",4
"lib1","SARS-CoV-2","AAATATCAACAAGTAG",4,42.31,6.43,-4.33,0.41,1.5,1.14,0.02,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","AAATATCAGTCTAAGC",1,352.05,10.76,0,0.06,2.93,1.03,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","AAATATCCAATTATAA",5,178.55,10.6,-0.16,0.04,2.9,1.04,0,">1 nonsynonymous","N1W V115L",2
"lib1","SARS-CoV-2","AAATATCCTCACACTA",7,79.13,10.36,-0.4,0.09,2.69,1.03,0,">1 nonsynonymous","E10P A42G P191L",3
"lib1","SARS-CoV-2","AAATATCGAAGACTAC",1,8.86,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","K56V D98Y S108F E141R C158M G174K",6
"lib1","SARS-CoV-2","AAATATCGCACACATG",5,89.1,9.59,-1.18,0.12,2.01,1.09,0.01,">1 nonsynonymous","R16E V52S N120W",3
"lib1","SARS-CoV-2","AAATATCGCTGCAGTA",3,21.98,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N4L A14G F99E F167Y",4
"lib1","SARS-CoV-2","AAATATCGTATTAAAG",4,47.08,10.82,0.06,0.08,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATATCGTGCCCTTC",5,114.58,10.48,-0.28,0.04,2.89,1.04,0,"1 nonsynonymous","Y66D",1
"lib1","SARS-CoV-2","AAATATCTAAACAAAA",4,110.14,10.08,-0.68,0.07,2.71,1.01,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","AAATATCTAGAAGAAC",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S N107F",2
"lib1","SARS-CoV-2","AAATATCTATGATGTA",6,77.37,6.66,-4.1,0.43,1.5,1.17,0.02,">1 nonsynonymous","A14L V71L K132L S139H K199T",5
"lib1","SARS-CoV-2","AAATATCTCATCCTAT",3,59.73,10.13,-0.63,0.07,2.8,1.04,0,">1 nonsynonymous","A14H L60Q",2
"lib1","SARS-CoV-2","AAATATCTCTCCGCGA",3,328.39,8.45,-2.32,0.12,1.5,1.03,0.01,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","AAATATGAAAATATAG",8,16.67,6,-4.76,2,3,1.08,0,">1 nonsynonymous","W23S L60S G117S E141G L183S",5
"lib1","SARS-CoV-2","AAATATGAAACTTGGA",3,23.04,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9E N64V I104S L125S P161L V182C",6
"lib1","SARS-CoV-2","AAATATGAACCCAGTC",1,6.71,6.64,-4.12,0.34,1.84,1.07,0.02,"1 nonsynonymous","I72N",1
"lib1","SARS-CoV-2","AAATATGAAGTAATGG",3,31.47,10.64,-0.13,0.05,2.88,1.04,0,">1 nonsynonymous","D59W K128E",2
"lib1","SARS-CoV-2","AAATATGACATTTGAA",8,133.7,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K132P G172M",2
"lib1","SARS-CoV-2","AAATATGACGTGACCC",1,34.5,9.75,-1.01,0.07,1.94,1.08,0,">1 nonsynonymous","D98V S184E",2
"lib1","SARS-CoV-2","AAATATGAGGTTTCAC",2,17.95,9.95,-0.81,0.14,2.74,1.07,0.01,">1 nonsynonymous","I138Q G155C",2
"lib1","SARS-CoV-2","AAATATGGAGAAAGAA",3,14.52,6.03,-4.73,0.44,3,1.1,0.01,">1 nonsynonymous","A81Y K114Q G146C L162Y V173L",5
"lib1","SARS-CoV-2","AAATATGGAGTCACAA",4,135.21,10.46,-0.31,0.04,2.89,1.01,0,">1 nonsynonymous","E10Q Y35W S43P S53G D90S",5
"lib1","SARS-CoV-2","AAATATGGCGAATCAG",3,68.42,10.32,-0.44,0.08,2.79,1,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","AAATATGGGTCAACAG",6,66.08,6.27,-4.49,0.8,1.5,1.24,0.03,">1 nonsynonymous","Y21F Q84S K94A N107T",4
"lib1","SARS-CoV-2","AAATATGGTAAAAAAA",6,68.21,8.57,-2.19,0.12,1.85,1.13,0.01,">1 nonsynonymous","N4S S69L Q168N",3
"lib1","SARS-CoV-2","AAATATGGTACATATC",1,27.13,10.56,-0.21,0.14,2.82,1.14,0.01,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","AAATATGTATCTCCGC",1,5.96,6,-4.76,1.02,3,1.03,0,">1 nonsynonymous","A89V N107E D112M E154L",4
"lib1","SARS-CoV-2","AAATATGTTGATACGA",2,26.74,6.9,-3.86,0.58,1.5,1.07,0.07,">1 nonsynonymous","N30W E76I",2
"lib1","SARS-CoV-2","AAATATTAACCCCAAT",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71C F160A",2
"lib1","SARS-CoV-2","AAATATTAAGTAAGTA",2,36.87,6,-4.76,1.1,1.5,1.13,0.01,">1 nonsynonymous","N40Q G86F",2
"lib1","SARS-CoV-2","AAATATTACAATGTTC",7,55.41,7.61,-3.15,0.1,2.16,1.07,0,">1 nonsynonymous","S43G N157P",2
"lib1","SARS-CoV-2","AAATATTACACAGAGG",3,69.28,10.77,0,0.06,2.91,1.05,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","AAATATTACTGCAGGT",5,48.43,10.6,-0.17,0.04,2.86,1.03,0,">1 nonsynonymous","A22K T85M",2
"lib1","SARS-CoV-2","AAATATTAGACTGCAC",4,23.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60H I104K",2
"lib1","SARS-CoV-2","AAATATTAGCCAAAAA",2,10.51,9.98,-0.78,0.13,1.9,1.05,0.01,">1 nonsynonymous","S19K S36K",2
"lib1","SARS-CoV-2","AAATATTCAATGGGGC",3,28.86,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G83H P133L G146Y F156V",4
"lib1","SARS-CoV-2","AAATATTCATATGCTG",5,1.57,NA,NA,NA,NA,NA,NA,"stop","W106K L122* P177G K199*",4
"lib1","SARS-CoV-2","AAATATTCGCATGGCG",4,59.32,10.76,-0.01,0.07,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATATTGATATCGAG",5,3.24,NA,NA,NA,NA,NA,NA,"stop","T3N G9S V52S N64V R127S A145G Q163* V181E",8
"lib1","SARS-CoV-2","AAATATTGTAACCAAA",8,38.59,6,-4.76,2,3,1.15,0,">1 nonsynonymous","I2L N40I G86D V153I",4
"lib1","SARS-CoV-2","AAATATTGTCGGAGTG",4,7.77,NA,NA,NA,NA,NA,NA,"stop","F12* L162S T170I",3
"lib1","SARS-CoV-2","AAATATTTAGCAGGCA",4,68.85,10.09,-0.68,0.1,2.43,1.05,0,"1 nonsynonymous","F185T",1
"lib1","SARS-CoV-2","AAATATTTAGCCCGTA",8,140.42,10.79,0.02,0.06,2.91,1.05,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","AAATATTTAGGACAAC",3,22.99,9.31,-1.45,0.24,1.65,1.07,0.03,"1 nonsynonymous","P96F",1
"lib1","SARS-CoV-2","AAATATTTAGTAATCC",5,47.66,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D34Q K94V V180T",3
"lib1","SARS-CoV-2","AAATATTTCTGGTTAA",21,350.93,10.6,-0.16,0.04,2.92,1.02,0,">1 nonsynonymous","N130M E141V",2
"lib1","SARS-CoV-2","AAATATTTGGTGAAAG",1,24.71,9.43,-1.34,0.08,2.9,1.09,0,">1 nonsynonymous","L5V T55H N157S A190G",4
"lib1","SARS-CoV-2","AAATATTTTCATAGAA",15,82.74,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","N4Y C49S D97N D112R",4
"lib1","SARS-CoV-2","AAATCAAAAATTGTTG",6,40.64,6.18,-4.58,1.21,1.5,1.15,0.06,">1 nonsynonymous","I2F L57W T63K L122Q F156S V181E",6
"lib1","SARS-CoV-2","AAATCAAAACCACGTA",8,35.47,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L95S R179S",2
"lib1","SARS-CoV-2","AAATCAAAACCTGTTT",2,6.48,6.37,-4.4,1.03,1.5,1.09,0.08,">1 nonsynonymous","N1S A14C T55I F99T",4
"lib1","SARS-CoV-2","AAATCAAAACTGATCC",4,29.98,8.57,-2.2,0.27,1.5,1.2,0.03,">1 nonsynonymous","V77C D98L T201M",3
"lib1","SARS-CoV-2","AAATCAAAAGAGTTGT",1,19.81,6.58,-4.18,0.38,1.65,1.19,0.03,">1 nonsynonymous","G9P K128L Y175R",3
"lib1","SARS-CoV-2","AAATCAAAATTACATG",5,2.29,NA,NA,NA,NA,NA,NA,"stop","V37L T55A G86M Y119*",4
"lib1","SARS-CoV-2","AAATCAAACTTTGCCC",1,10.26,NA,NA,NA,NA,NA,NA,"stop","A18S F62G Y93C D112P Q144*",5
"lib1","SARS-CoV-2","AAATCAAAGCGAGTGC",4,146.15,10.77,0,0.05,2.89,1.06,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","AAATCAAAGGTTGAAA",3,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92Y D112A N120H S147D",4
"lib1","SARS-CoV-2","AAATCAAATATACTAA",1,14.01,10.48,-0.28,0.18,2.6,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAATCAACAAGTCAAT",1,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P D68P Y91F S129G Q176F",5
"lib1","SARS-CoV-2","AAATCAACCACTTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T46I K56I A81P A89* C102W",5
"lib1","SARS-CoV-2","AAATCAACGCCTAGAA",3,70,7.32,-3.45,0.22,1.5,1.04,0.01,">1 nonsynonymous","V11Y D90I P149I",3
"lib1","SARS-CoV-2","AAATCAAGAACCATGC",1,50.41,10,-0.76,0.1,2.28,1.03,0,">1 nonsynonymous","N13S P191L",2
"lib1","SARS-CoV-2","AAATCAAGAACTAAAG",15,112,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6L V103C D112Y K199T",4
"lib1","SARS-CoV-2","AAATCAAGCCACCATC",7,127.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S29A V77E F99V R124N I142P",5
"lib1","SARS-CoV-2","AAATCAAGCTCCACCT",7,16.56,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","V20I I88R G146T",3
"lib1","SARS-CoV-2","AAATCAAGGGAATAAA",1,1.75,NA,NA,NA,NA,NA,NA,"stop","G51* Y121N I142K",3
"lib1","SARS-CoV-2","AAATCAAGGTCATTAC",11,151.67,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31G C61S L95T N120M I138V Y175V",6
"lib1","SARS-CoV-2","AAATCAAGGTTTGTCT",7,1485.96,9.28,-1.49,0.09,2.18,1.08,0,">1 nonsynonymous","R27S A67F G174Y",3
"lib1","SARS-CoV-2","AAATCAAGTGATGTAA",1,47.11,10.8,0.03,0.09,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATCAATAAAGAATA",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R L122I",2
"lib1","SARS-CoV-2","AAATCAATAACAAGTT",3,76.51,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","R124L",1
"lib1","SARS-CoV-2","AAATCAATAGATAAAA",5,12.43,9.76,-1,0.35,1.64,1.09,0.04,">1 nonsynonymous","L5Y P54W G86N",3
"lib1","SARS-CoV-2","AAATCAATATAAACGT",1,14.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9R I28L L57D G83F A105I",5
"lib1","SARS-CoV-2","AAATCACAAGACTGAA",2,36.02,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L38S T55D G86Q C158G",4
"lib1","SARS-CoV-2","AAATCACAAGAGAAAA",1,8.05,10.08,-0.68,0.21,2.34,1.12,0.03,">1 nonsynonymous","R136T V173H",2
"lib1","SARS-CoV-2","AAATCACACTCCCATG",3,52.55,6.99,-3.78,0.47,1.5,1.19,0.04,">1 nonsynonymous","Y39F E76R Y119D",3
"lib1","SARS-CoV-2","AAATCACATGACAAAT",4,159.52,10.77,0.01,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCACATGGATTAA",3,9.04,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G101E G155R V182M",3
"lib1","SARS-CoV-2","AAATCACCAAGTTGAA",4,76.54,9.34,-1.43,0.14,2.07,1.09,0.01,">1 nonsynonymous","S41I T63A P149R G155F",4
"lib1","SARS-CoV-2","AAATCACCACCCCACA",6,99.12,8.91,-1.85,0.12,1.79,1.16,0.01,">1 nonsynonymous","C31L D90L N120E P149Q",4
"lib1","SARS-CoV-2","AAATCACCGGGCATCA",2,48.49,10.67,-0.1,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCACCTATAGCAA",1,49.78,10.52,-0.25,0.05,2.91,1.02,0,"1 nonsynonymous","S164W",1
"lib1","SARS-CoV-2","AAATCACCTTAAAAGA",17,7.02,10.04,-0.73,0.16,2.68,1.16,0.01,"1 nonsynonymous","T3E",1
"lib1","SARS-CoV-2","AAATCACGAACTAATC",1,28.73,10.09,-0.67,0.11,2.16,1.06,0.01,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","AAATCACGACAAAAAA",1,13.25,10.6,-0.16,0.04,2.88,1.08,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","AAATCACGATCAACGT",2,9.15,10.84,0.08,0.11,2.91,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATCACGGATACACT",3,28.33,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N30M G86Y D98A N109C N120I",5
"lib1","SARS-CoV-2","AAATCACGTACTGCAT",3,21.71,10.13,-0.64,0.1,2.75,1.02,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","AAATCACGTATAAGAC",3,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I Q84H P197S",3
"lib1","SARS-CoV-2","AAATCACGTCAAGTTA",6,35.78,10.77,0.01,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCACGTTCCTAGG",7,25.13,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","E10N T15L F99H I138Q Q163P",5
"lib1","SARS-CoV-2","AAATCACTATATTTAC",1,28.14,9.66,-1.1,0.14,1.79,1.21,0.01,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","AAATCACTCTAGCTAG",3,82.21,8.72,-2.05,0.1,2.74,1.03,0,">1 nonsynonymous","E10R Q168L V173E",3
"lib1","SARS-CoV-2","AAATCACTGATAATAC",7,124.24,10.42,-0.35,0.04,2.87,1.04,0,">1 nonsynonymous","Y91C T201G",2
"lib1","SARS-CoV-2","AAATCAGAAAGAAGAT",2,40.2,10.74,-0.03,0.04,2.87,1.05,0,"1 nonsynonymous","K128R",1
"lib1","SARS-CoV-2","AAATCAGAAAGTCAAT",3,80.89,8.94,-1.83,0.29,1.5,1,0.04,">1 nonsynonymous","N40I F47Y I138L G152V",4
"lib1","SARS-CoV-2","AAATCAGAACCATCGC",2,62.76,8.68,-2.08,0.08,2.9,1.04,0,">1 nonsynonymous","Y119L G166I",2
"lib1","SARS-CoV-2","AAATCAGAATTGACGG",2,22.22,6,-4.76,2,3,1.09,0,">1 nonsynonymous","E10L P82S R136P Y165E",4
"lib1","SARS-CoV-2","AAATCAGGAGTCATGA",4,88.46,10.66,-0.1,0.05,2.91,1.05,0,"1 nonsynonymous","D98H",1
"lib1","SARS-CoV-2","AAATCAGGAGTTGACG",11,57.71,7.67,-3.09,0.28,1.5,1.05,0.02,">1 nonsynonymous","S41V N64L N107V",3
"lib1","SARS-CoV-2","AAATCAGTAAGACATT",2,7.4,10.69,-0.08,0.11,2.86,1,0,">1 nonsynonymous","R78W Q84H L122Q",3
"lib1","SARS-CoV-2","AAATCAGTCAACCAGA",2,32.81,10.52,-0.25,0.05,2.97,1.01,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","AAATCAGTGTGCTATT",3,41.07,6.07,-4.7,0.93,1.5,1.19,0.02,">1 nonsynonymous","A14Y E135P L183V",3
"lib1","SARS-CoV-2","AAATCATACGTAGTAG",5,25.82,10.05,-0.71,0.06,2.77,1.03,0,">1 nonsynonymous","K56L A105G",2
"lib1","SARS-CoV-2","AAATCATATGCAAGAT",1,14.72,9.97,-0.79,0.26,2.24,1,0.03,">1 nonsynonymous","N4P A42R D90N P133H",4
"lib1","SARS-CoV-2","AAATCATCACCGAGTA",1,8.68,10.84,0.07,0.11,2.98,1,0,"1 nonsynonymous","A192C",1
"lib1","SARS-CoV-2","AAATCATCGAAAAGAA",4,75.11,10.22,-0.55,0.04,2.92,1.01,0,">1 nonsynonymous","G9M K87N",2
"lib1","SARS-CoV-2","AAATCATCGGCCATAG",6,232.04,9.38,-1.38,0.06,2.84,1.12,0,"1 nonsynonymous","G166T",1
"lib1","SARS-CoV-2","AAATCATCTCCTAACG",6,1.55,NA,NA,NA,NA,NA,NA,"stop","E10H L60* N110C P133H",4
"lib1","SARS-CoV-2","AAATCATTAAATGTGC",7,1.74,NA,NA,NA,NA,NA,NA,"stop","I2R L38* L125S",3
"lib1","SARS-CoV-2","AAATCATTCTCAACCA",5,81.22,10.94,0.17,0.08,2.96,1,0,"1 nonsynonymous","L188S",1
"lib1","SARS-CoV-2","AAATCATTCTGTAACA",4,23.82,10.72,-0.05,0.05,2.99,1.02,0,">1 nonsynonymous","L122F A190Q",2
"lib1","SARS-CoV-2","AAATCATTGAGATGAT",5,0.59,NA,NA,NA,NA,NA,NA,"stop","I104* V173E",2
"lib1","SARS-CoV-2","AAATCATTGAGGAAAA",2,53.31,6.19,-4.57,0.76,1.5,1.19,0.03,">1 nonsynonymous","D137T Y175L",2
"lib1","SARS-CoV-2","AAATCATTGGCATACC",2,23.49,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12A A33G K87S L125Y",4
"lib1","SARS-CoV-2","AAATCATTTCAGATAG",2,25.02,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","C6R V103I G146V",3
"lib1","SARS-CoV-2","AAATCCAAAAACATTA",6,49.74,6.02,-4.75,0.93,1.5,1.15,0.01,">1 nonsynonymous","R73L I88Y F99D R127E",4
"lib1","SARS-CoV-2","AAATCCAAAACGTTTA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","G9* K56L P82T T170D",4
"lib1","SARS-CoV-2","AAATCCAAAAGTAATT",1,10.83,10.69,-0.08,0.18,2.93,1,0.02,">1 nonsynonymous","F44L K56E",2
"lib1","SARS-CoV-2","AAATCCAAGCTCGCCT",3,24.81,7.05,-3.72,0.22,1.62,1.12,0.01,">1 nonsynonymous","A89L G116D",2
"lib1","SARS-CoV-2","AAATCCAAGTAAGTGT",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59N A67S Y121M I142W",4
"lib1","SARS-CoV-2","AAATCCACAAAAGACA",8,125.24,9.97,-0.79,0.07,2.65,1.03,0,"1 nonsynonymous","V173P",1
"lib1","SARS-CoV-2","AAATCCACACAATCTT",2,49.59,9.28,-1.48,0.1,1.99,1.1,0,">1 nonsynonymous","K56L V65Y K87Y G116R",4
"lib1","SARS-CoV-2","AAATCCACCTGAACAT",7,71.82,10.7,-0.06,0.07,2.87,1.06,0,">1 nonsynonymous","N1S Y66V",2
"lib1","SARS-CoV-2","AAATCCACTTAAAAAA",1,1.08,NA,NA,NA,NA,NA,NA,"stop","L60R V115*",2
"lib1","SARS-CoV-2","AAATCCAGCCTCTGGC",2,16.84,10.51,-0.26,0.09,2.82,1.14,0.01,">1 nonsynonymous","D59Y I104V N171H",3
"lib1","SARS-CoV-2","AAATCCAGCTACTAGA",4,1.22,NA,NA,NA,NA,NA,NA,"stop","C61Q L162S R179*",3
"lib1","SARS-CoV-2","AAATCCAGCTCCACAC",6,97.25,10.48,-0.28,0.04,2.93,1.01,0,"1 nonsynonymous","D34S",1
"lib1","SARS-CoV-2","AAATCCAGTAAAATAA",3,1.01,NA,NA,NA,NA,NA,NA,"stop","L5* C31S S139A",3
"lib1","SARS-CoV-2","AAATCCAGTACTACCT",4,19.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5G S19K L38P I72R R136K T170R",6
"lib1","SARS-CoV-2","AAATCCATTTGACAGA",7,63.78,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","T100P E135H P149S",3
"lib1","SARS-CoV-2","AAATCCCAAAATAAGA",6,87.75,9.8,-0.96,0.08,2.71,1.04,0,">1 nonsynonymous","T85N Y121K",2
"lib1","SARS-CoV-2","AAATCCCAACAAATAA",4,93.75,10.24,-0.53,0.05,2.9,1.02,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","AAATCCCAACATATGA",6,83.69,9.43,-1.33,0.08,2.76,1.08,0,">1 nonsynonymous","A14E K87W T148K F156A",4
"lib1","SARS-CoV-2","AAATCCCAGCGCTCAG",2,42.18,10.65,-0.11,0.1,2.95,1.04,0.01,"1 nonsynonymous","G174N",1
"lib1","SARS-CoV-2","AAATCCCATCACAATT",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86E Y119L",2
"lib1","SARS-CoV-2","AAATCCCATCCCATGG",2,11.59,10.51,-0.26,0.12,2.54,1.13,0.01,">1 nonsynonymous","L5F I80V L95I",3
"lib1","SARS-CoV-2","AAATCCCATCTGGTCT",5,89.71,9.01,-1.75,0.1,2.54,1.17,0,">1 nonsynonymous","N107D E154K",2
"lib1","SARS-CoV-2","AAATCCCATGATGTTA",1,30.88,10.12,-0.65,0.16,2.52,1.16,0.01,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","AAATCCCCACACAACA",6,28.28,6.17,-4.59,0.7,1.5,1.19,0.02,">1 nonsynonymous","A42P G86V Y123S",3
"lib1","SARS-CoV-2","AAATCCCCACGCTTGT",6,38.72,6,-4.76,1.22,1.5,1.14,0.01,">1 nonsynonymous","T3S Y35S K56G C150D",4
"lib1","SARS-CoV-2","AAATCCCCCCGAAACG",6,221.93,10.68,-0.08,0.04,2.93,1.06,0,">1 nonsynonymous","Y35L N40S V173D",3
"lib1","SARS-CoV-2","AAATCCCCTACAAAAT",2,80.39,9.54,-1.23,0.1,2.65,1.06,0,">1 nonsynonymous","Y91W F160V",2
"lib1","SARS-CoV-2","AAATCCCCTAGTACGT",1,7.15,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T46S C158Y",2
"lib1","SARS-CoV-2","AAATCCCGAAATAATT",2,75.74,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S113N Y119P P133S Y159H",4
"lib1","SARS-CoV-2","AAATCCCGATACTATA",4,15.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8L S19L F47T",3
"lib1","SARS-CoV-2","AAATCCCGGCCTACAT",3,45.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36F Y50I Q144E",3
"lib1","SARS-CoV-2","AAATCCCTAACCGCGG",2,0.97,NA,NA,NA,NA,NA,NA,"stop","Y121V R179*",2
"lib1","SARS-CoV-2","AAATCCCTTCGTTTCA",1,21.73,9.88,-0.88,0.08,2.83,1.09,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","AAATCCCTTGGGTAAA",4,82.33,9.92,-0.84,0.06,2.69,1.04,0,">1 nonsynonymous","C31R N58A T201G",3
"lib1","SARS-CoV-2","AAATCCGAATTCTTAA",2,13.2,9.71,-1.05,0.16,2.15,1.06,0.01,">1 nonsynonymous","L57G G152D S164E",3
"lib1","SARS-CoV-2","AAATCCGAGAGTAGAG",3,39.68,6.96,-3.8,0.52,1.75,1.18,0.06,">1 nonsynonymous","G51T C61F G86S F167W",4
"lib1","SARS-CoV-2","AAATCCGAGGTCAATA",1,4.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11P",1
"lib1","SARS-CoV-2","AAATCCGATAATAAAT",5,47.05,9.26,-1.5,0.23,1.5,1.1,0.02,">1 nonsynonymous","G51W L60W",2
"lib1","SARS-CoV-2","AAATCCGATTCTACGC",1,39.25,10.7,-0.06,0.07,2.87,1.07,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","AAATCCGCCAAGTGGC",3,42.67,10.83,0.06,0.09,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCCGCGGAGGACT",1,25.6,7.28,-3.49,0.27,1.5,1.08,0.02,">1 nonsynonymous","N120L Y143M G152V",3
"lib1","SARS-CoV-2","AAATCCGTGATACTAT",6,153.95,10.49,-0.27,0.04,2.92,1.01,0,"1 nonsynonymous","F44K",1
"lib1","SARS-CoV-2","AAATCCTAAAATTAAG",1,23.54,10.53,-0.24,0.08,2.94,1,0,">1 nonsynonymous","F47L V115E",2
"lib1","SARS-CoV-2","AAATCCTAAGCCTATA",4,63.95,7.17,-3.59,0.42,1.5,1.15,0.04,">1 nonsynonymous","D90S R124L",2
"lib1","SARS-CoV-2","AAATCCTACTTGATCA",4,2.8,NA,NA,NA,NA,NA,NA,"stop","K56L V180T G196*",3
"lib1","SARS-CoV-2","AAATCCTAGTAATAAA",1,20.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1D V103C S139N K199Y",4
"lib1","SARS-CoV-2","AAATCCTATCGGTAAG",2,10,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60K Q79A L131A D137S",4
"lib1","SARS-CoV-2","AAATCCTATGGTGGGC",6,50.12,10.14,-0.62,0.13,2.4,1,0.01,">1 nonsynonymous","G9L K48T K56V",3
"lib1","SARS-CoV-2","AAATCCTATTTCACGT",1,5.45,7.94,-2.82,0.38,1.5,1,0.03,">1 nonsynonymous","I2Y C49F I80W D90M F185C",5
"lib1","SARS-CoV-2","AAATCCTCAGGCACTA",7,0.46,NA,NA,NA,NA,NA,NA,"stop","L38* E76A",2
"lib1","SARS-CoV-2","AAATCCTCTATAACAG",7,239.41,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62L D68V A89S Y165E",4
"lib1","SARS-CoV-2","AAATCCTCTGCACCCC",9,2.56,NA,NA,NA,NA,NA,NA,"stop","D68* G166* P197A",3
"lib1","SARS-CoV-2","AAATCCTGAGACTCTA",4,21.7,9.78,-0.99,0.17,2.27,1.04,0.01,">1 nonsynonymous","G51V K56L",2
"lib1","SARS-CoV-2","AAATCCTGTTAGGCTA",3,1.38,NA,NA,NA,NA,NA,NA,"stop","T3* V77W N118C",3
"lib1","SARS-CoV-2","AAATCCTTACCAAGAT",5,54.22,10.83,0.07,0.09,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCCTTATTTTTAA",4,23.15,6,-4.76,2,3,1.2,0,">1 nonsynonymous","W23C S45A N118H G152V",4
"lib1","SARS-CoV-2","AAATCCTTTTTCTACC",3,11.92,7.52,-3.25,0.41,1.5,1,0.06,">1 nonsynonymous","T15N D90V D112P",3
"lib1","SARS-CoV-2","AAATCGAAACGTAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","K26E T85* F134R E141*",4
"lib1","SARS-CoV-2","AAATCGAACTTTTAAT",3,93.89,10.7,-0.06,0.04,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCGAATTAAACTT",1,49.83,10.85,0.09,0.09,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATCGACTAAGTCTA",4,46.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q L38K",2
"lib1","SARS-CoV-2","AAATCGACTATGGAAA",5,120.18,10.57,-0.19,0.03,2.95,1.03,0,">1 nonsynonymous","Y66V D97R L187M",3
"lib1","SARS-CoV-2","AAATCGAGCACACTGT",1,38.93,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","A14N F62N K87P G117K P133V L162F",6
"lib1","SARS-CoV-2","AAATCGAGTACTCTAA",9,44.91,6,-4.76,1.54,1.5,1.24,0.03,"1 nonsynonymous","R179W",1
"lib1","SARS-CoV-2","AAATCGATTATATGGC",4,37.19,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","S41P L95R T201D",3
"lib1","SARS-CoV-2","AAATCGCAAAATTTCT",5,48.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L60K V181W",2
"lib1","SARS-CoV-2","AAATCGCACCTGCCAG",3,18.04,6.94,-3.83,0.46,1.68,1.33,0.04,">1 nonsynonymous","D68G K128E E135R T170F",4
"lib1","SARS-CoV-2","AAATCGCACGGTAAAC",5,1.42,NA,NA,NA,NA,NA,NA,"stop","R27* K48R",2
"lib1","SARS-CoV-2","AAATCGCATAAAAACT",2,21.92,9.96,-0.81,0.2,2.19,1.03,0.02,">1 nonsynonymous","F17M D97L",2
"lib1","SARS-CoV-2","AAATCGCATGACCAAC",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K N58T D97M",3
"lib1","SARS-CoV-2","AAATCGCATTTAGCAA",6,68.14,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R27W V77R P82Q Y159K",4
"lib1","SARS-CoV-2","AAATCGCCAAAGTAAG",1,62.39,10.86,0.1,0.06,2.95,1,0,"1 nonsynonymous","I138T",1
"lib1","SARS-CoV-2","AAATCGCGACCCCGTA",4,51.59,9.97,-0.79,0.13,2.06,1.05,0.01,">1 nonsynonymous","T3I G83I",2
"lib1","SARS-CoV-2","AAATCGCGGGTGTCAT",14,285.89,10.69,-0.07,0.04,2.9,1.04,0,">1 nonsynonymous","D97M H189Y",2
"lib1","SARS-CoV-2","AAATCGCTCTCGAGAA",3,96.63,10.34,-0.43,0.05,2.88,1.02,0,">1 nonsynonymous","I72V I104C S184A",3
"lib1","SARS-CoV-2","AAATCGCTGGATATCC",3,27.93,10.03,-0.74,0.16,2.09,1.06,0.01,">1 nonsynonymous","A14W K56A",2
"lib1","SARS-CoV-2","AAATCGCTTAATTAAG",2,33.72,6,-4.76,1,1.5,1.09,0.01,">1 nonsynonymous","Q163L G172V K199W",3
"lib1","SARS-CoV-2","AAATCGCTTATAATAA",4,36.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3Q P82T S113T G166L G196L",5
"lib1","SARS-CoV-2","AAATCGGATGCTCTGT",5,80.04,10.62,-0.15,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATCGGCATCAAATT",2,12.54,9.78,-0.99,0.13,2.01,1.02,0.01,">1 nonsynonymous","F8L F12M F44I P133V",4
"lib1","SARS-CoV-2","AAATCGGTAAGATAAT",5,70.04,6.83,-3.94,0.24,1.5,1.12,0.01,">1 nonsynonymous","D112E F126R",2
"lib1","SARS-CoV-2","AAATCGGTGGAGGCTG",4,0.99,NA,NA,NA,NA,NA,NA,"stop","F8* N92I V173H",3
"lib1","SARS-CoV-2","AAATCGGTTACAACAG",3,27.09,10.4,-0.37,0.08,2.8,1.15,0,">1 nonsynonymous","G83N G174A",2
"lib1","SARS-CoV-2","AAATCGGTTCCACGAA",3,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54N V182E",2
"lib1","SARS-CoV-2","AAATCGTAGAATAGGT",1,13.05,8.27,-2.5,0.1,2.95,1.09,0,">1 nonsynonymous","K87T G117V V173W",3
"lib1","SARS-CoV-2","AAATCGTAGAGTCATG",3,59.67,10.01,-0.75,0.07,1.99,1.05,0,"1 nonsynonymous","A89M",1
"lib1","SARS-CoV-2","AAATCGTATTTGTGTT",8,163.58,9.18,-1.59,0.12,2.29,1.13,0,">1 nonsynonymous","C6D S36L G152T",3
"lib1","SARS-CoV-2","AAATCGTCTTTGTACC",5,164.71,8.52,-2.24,0.14,1.84,1.12,0.01,">1 nonsynonymous","D59V Y143M P149L",3
"lib1","SARS-CoV-2","AAATCGTGAACTCAGT",1,30.69,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D97P G116Q P133Q P161T",4
"lib1","SARS-CoV-2","AAATCGTGAATGGTTT",3,26.66,10.17,-0.59,0.1,2.84,1,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","AAATCGTGCCTGGCGT",2,18.76,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S43I C49S P169R",3
"lib1","SARS-CoV-2","AAATCGTTATATTCAG",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28Q A42M G86D K87G T100K A192C",6
"lib1","SARS-CoV-2","AAATCGTTGCTTGTAA",1,10.43,6,-4.76,2,1.5,1.23,0.05,"1 nonsynonymous","C102Q",1
"lib1","SARS-CoV-2","AAATCTAAAATATTAG",2,12.01,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","V103S Y121W V173F K198R",4
"lib1","SARS-CoV-2","AAATCTAAAATGTTTG",3,70.38,9.83,-0.93,0.05,2.86,1.05,0,"1 nonsynonymous","A145K",1
"lib1","SARS-CoV-2","AAATCTAAAGCTAGTA",1,6.05,6,-4.76,2,1.5,1.08,0.05,">1 nonsynonymous","G9Q N120L D137T G146K",4
"lib1","SARS-CoV-2","AAATCTAAAGCTCCAA",1,34.25,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","G83C A105L V115Y R124A S184P",5
"lib1","SARS-CoV-2","AAATCTAACATGGGCT",1,9.68,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","A105C D112S",2
"lib1","SARS-CoV-2","AAATCTAACCAATTAA",2,72.54,10.62,-0.14,0.05,2.89,1.03,0,">1 nonsynonymous","T3Y T46L",2
"lib1","SARS-CoV-2","AAATCTAAGCCTTACA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S K114M",2
"lib1","SARS-CoV-2","AAATCTACAATGCTTG",4,16.85,6,-4.76,1.35,1.5,1.13,0.03,">1 nonsynonymous","N1S G74L D98G",3
"lib1","SARS-CoV-2","AAATCTACGAGCTGGA",8,31.65,8.28,-2.49,0.19,1.5,1.17,0.02,">1 nonsynonymous","G51V T100S T170R",3
"lib1","SARS-CoV-2","AAATCTACGATATCCC",11,1.46,NA,NA,NA,NA,NA,NA,"stop","I2G N107A Y119*",3
"lib1","SARS-CoV-2","AAATCTACTATTTCCT",8,95.63,9.27,-1.5,0.1,1.95,1.15,0,">1 nonsynonymous","F44I R78C W106A",3
"lib1","SARS-CoV-2","AAATCTAGACCGTTAT",4,88.55,10.66,-0.1,0.06,2.9,1.05,0,"1 nonsynonymous","L162V",1
"lib1","SARS-CoV-2","AAATCTAGATTGTACA",2,61.89,10.77,0,0.06,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATCTAGCTTATCGC",1,74.12,9.56,-1.2,0.08,2.78,1.11,0,">1 nonsynonymous","G9S G116V L125S",3
"lib1","SARS-CoV-2","AAATCTAGTACTACTA",8,40.16,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T3A N92R",2
"lib1","SARS-CoV-2","AAATCTAGTTCATTAA",19,285.98,10.32,-0.44,0.03,2.83,1.02,0,">1 nonsynonymous","S19P F47L T100L",3
"lib1","SARS-CoV-2","AAATCTATGCCCTTAG",5,33.62,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T46E Y93S",2
"lib1","SARS-CoV-2","AAATCTCAATGCACTA",3,1.51,NA,NA,NA,NA,NA,NA,"stop","D68M D137Q F160I F167D T201*",5
"lib1","SARS-CoV-2","AAATCTCCCTAAGTTA",1,16.03,8.4,-2.37,0.25,2.19,1.12,0.02,">1 nonsynonymous","L5T T85R G172S",3
"lib1","SARS-CoV-2","AAATCTCGACGGAAAC",1,9.49,10.25,-0.51,0.16,2.86,1,0.01,"1 nonsynonymous","R136N",1
"lib1","SARS-CoV-2","AAATCTCGAGAGAAAG",3,9.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29Q P96T R127C",3
"lib1","SARS-CoV-2","AAATCTCGCAGTGATG",2,20.41,7.12,-3.65,0.24,1.93,1.14,0.01,">1 nonsynonymous","N120S R136T V153R G166L G174N",5
"lib1","SARS-CoV-2","AAATCTCTATTAGGAC",4,26.65,6.31,-4.45,0.47,1.5,1.1,0.01,">1 nonsynonymous","F12S G86R Y93D",3
"lib1","SARS-CoV-2","AAATCTCTCTGATTAA",9,0.39,NA,NA,NA,NA,NA,NA,"stop","S69E G172*",2
"lib1","SARS-CoV-2","AAATCTCTGCTGACCT",1,16.76,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","A81H G86R P149Q V153N G166S",5
"lib1","SARS-CoV-2","AAATCTGAAAACTCGC",4,25.74,10.73,-0.03,0.06,2.91,1.09,0,">1 nonsynonymous","V37G N110L",2
"lib1","SARS-CoV-2","AAATCTGAAGCAGTTT",3,10.72,10.36,-0.4,0.11,2.45,1,0.01,">1 nonsynonymous","T3W D34H N120Q",3
"lib1","SARS-CoV-2","AAATCTGAATTCTCCT",1,6.14,6,-4.76,2,1.5,1.47,0.07,">1 nonsynonymous","P7S I80W V115R",3
"lib1","SARS-CoV-2","AAATCTGACTGAATTG",1,44.17,10.28,-0.48,0.07,2.8,1.05,0,">1 nonsynonymous","I28M S36E D90I",3
"lib1","SARS-CoV-2","AAATCTGAGACCCCGA",1,13.31,10.77,0.01,0.13,2.91,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAATCTGAGCGATTAG",2,13.18,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L60R W106N S113W",3
"lib1","SARS-CoV-2","AAATCTGCAGTTTATG",6,15.71,NA,NA,NA,NA,NA,NA,"stop","I2T A14M S69* G86S D98E N130G Q144Y",7
"lib1","SARS-CoV-2","AAATCTGCATTCCTTC",11,235.69,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D97E P149I P177L",3
"lib1","SARS-CoV-2","AAATCTGCCCTCACCA",3,21.8,10.79,0.03,0.12,2.86,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAATCTGCTTAGTAGC",2,33.2,10.89,0.13,0.13,2.86,1.07,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","AAATCTGGACAAAAAA",2,6.54,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2R P54H A89V N107E D112C N120R",6
"lib1","SARS-CoV-2","AAATCTGGACATCAGT",7,66.81,9.71,-1.05,0.12,1.81,1.08,0.01,">1 nonsynonymous","A42W W106A L187M",3
"lib1","SARS-CoV-2","AAATCTGTATACCTTT",3,71.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V20H V32R L57S L122N",4
"lib1","SARS-CoV-2","AAATCTGTCATTCCGG",5,0.18,NA,NA,NA,NA,NA,NA,"stop","A18K I72Y I88Q D98L Y119L T148S K199*",7
"lib1","SARS-CoV-2","AAATCTGTTTTAAAGA",5,30.69,7.83,-2.94,0.28,1.53,1.14,0.03,">1 nonsynonymous","T3H F44D G83F L111C N118G",5
"lib1","SARS-CoV-2","AAATCTTAAAATTACT",1,1.12,NA,NA,NA,NA,NA,NA,"stop","V77L T201*",2
"lib1","SARS-CoV-2","AAATCTTAAGTCTTGG",9,120.07,9.8,-0.96,0.09,1.94,1.09,0,"1 nonsynonymous","Q84P",1
"lib1","SARS-CoV-2","AAATCTTCATTTAAAA",7,62.16,10.02,-0.75,0.08,2.4,1.08,0,">1 nonsynonymous","N64L C102I",2
"lib1","SARS-CoV-2","AAATCTTCCACACCCA",4,0.59,NA,NA,NA,NA,NA,NA,"stop","C102Y E141*",2
"lib1","SARS-CoV-2","AAATCTTCTGAAACGG",9,15.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F47S G86Y T148P G196Y",4
"lib1","SARS-CoV-2","AAATCTTGCGCCTAGG",15,357.32,10.78,0.02,0.06,2.93,1.05,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","AAATCTTGTCTCAGTA",4,43.69,6,-4.76,2,3,1.21,0,">1 nonsynonymous","E10D V37R A81F N107K Y119D P149H",6
"lib1","SARS-CoV-2","AAATCTTTAAAAAATC",6,5.63,NA,NA,NA,NA,NA,NA,"stop","P82* E141G T148D",3
"lib1","SARS-CoV-2","AAATCTTTAATCATAT",3,1.62,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","AAATCTTTCACCAGCG",3,27.97,9.86,-0.9,0.11,2.2,1.05,0,">1 nonsynonymous","L57Y K87R K128L",3
"lib1","SARS-CoV-2","AAATCTTTCGCTAGAT",23,394.03,10.25,-0.51,0.03,2.82,1.04,0,"1 nonsynonymous","V65R",1
"lib1","SARS-CoV-2","AAATCTTTCTGAACGG",6,12.65,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14S C49F K56N G83W Y178L",5
"lib1","SARS-CoV-2","AAATGAAAAATCCATG",4,8.49,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","V77K C158Y P169L",3
"lib1","SARS-CoV-2","AAATGAAAAATTGATC",6,127,10.11,-0.65,0.05,2.85,1.04,0,">1 nonsynonymous","T140W G174D",2
"lib1","SARS-CoV-2","AAATGAAAATAGAAAA",9,52.87,9.55,-1.21,0.17,1.67,1.07,0.01,">1 nonsynonymous","T15S D59R L162R",3
"lib1","SARS-CoV-2","AAATGAAAATCTTGAC",2,6.43,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I88V G116D Y121W P149Q Q168L F185V",6
"lib1","SARS-CoV-2","AAATGAAACAATGGAC",13,178.36,10.6,-0.16,0.06,2.78,1.13,0,">1 nonsynonymous","I2G P149I",2
"lib1","SARS-CoV-2","AAATGAAACCATTACC",4,22.65,10.78,0.01,0.09,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGAAACTATCCGA",7,50.53,9.44,-1.33,0.15,1.9,1.15,0.01,">1 nonsynonymous","L38N T148R C195W",3
"lib1","SARS-CoV-2","AAATGAAAGACCAATG",4,14.33,9.94,-0.82,0.2,2.2,1.14,0.02,">1 nonsynonymous","S19Q A42V T201L",3
"lib1","SARS-CoV-2","AAATGAAAGGCTGCCC",1,7.51,10.51,-0.25,0.32,2.09,1.19,0.04,"1 nonsynonymous","I88T",1
"lib1","SARS-CoV-2","AAATGAAAGTCAGAGG",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A D34M",2
"lib1","SARS-CoV-2","AAATGAAATTCATCGG",10,87.49,10.75,-0.01,0.06,2.95,1.02,0,"1 nonsynonymous","D75F",1
"lib1","SARS-CoV-2","AAATGAACAATGAATA",3,92.51,10.75,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGAACCAAAGAAA",2,39.37,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","V11L V115T P133I G146E Y165H H189N",6
"lib1","SARS-CoV-2","AAATGAACCGAAAGGC",2,15.71,7.99,-2.78,0.42,1.5,1,0.07,">1 nonsynonymous","T63S L183H S200V",3
"lib1","SARS-CoV-2","AAATGAACGCATTCAA",9,114.85,7.72,-3.04,0.21,1.5,1.12,0.01,">1 nonsynonymous","Y35L N110L L131K",3
"lib1","SARS-CoV-2","AAATGAACTAACGATG",8,60.57,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23Q L38H T63A D90I P96R G166F T201L",7
"lib1","SARS-CoV-2","AAATGAACTACTTCTA",4,1.74,NA,NA,NA,NA,NA,NA,"stop","S29G S43* Y50C K87V K94S P133W G172* G196L",8
"lib1","SARS-CoV-2","AAATGAACTTGTTCCA",2,25.17,8.56,-2.2,0.2,1.71,1.27,0.02,">1 nonsynonymous","V37M V103M",2
"lib1","SARS-CoV-2","AAATGAAGACTGGGCC",8,12.24,7.03,-3.73,0.66,1.5,1.28,0.07,">1 nonsynonymous","I2N F12I D34Q N151K F185S",5
"lib1","SARS-CoV-2","AAATGAAGCGACCAGA",4,2.28,NA,NA,NA,NA,NA,NA,"stop","A33H G86P G152*",3
"lib1","SARS-CoV-2","AAATGAAGGACACAAT",4,22.95,6.34,-4.42,0.78,2.08,1.26,0.02,">1 nonsynonymous","G86R R127T P169D",3
"lib1","SARS-CoV-2","AAATGAAGGTAGATGT",6,62.15,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V20W P54A E141W",3
"lib1","SARS-CoV-2","AAATGAAGGTCCCGAG",6,62.66,10.88,0.12,0.06,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATGAAGTATAAAAG",6,83.14,6.69,-4.08,0.35,1.5,1.14,0.02,">1 nonsynonymous","Y119M T140R G152D Y165R",4
"lib1","SARS-CoV-2","AAATGAAGTCCGAACA",10,101.51,9.38,-1.38,0.13,1.84,1.14,0.01,">1 nonsynonymous","I2Q G86D F160N",3
"lib1","SARS-CoV-2","AAATGAATAAACCACC",5,81.53,10.57,-0.19,0.04,2.87,1.05,0,">1 nonsynonymous","L5S A22M P54T",3
"lib1","SARS-CoV-2","AAATGAATAACACTAA",1,35.71,9.01,-1.76,0.08,2.98,1.05,0,">1 nonsynonymous","S29H T170V",2
"lib1","SARS-CoV-2","AAATGAATAAGTCGTA",2,1.93,NA,NA,NA,NA,NA,NA,"stop","N58L C102G K128* G155V",4
"lib1","SARS-CoV-2","AAATGAATACTTCCTT",2,8.81,6.74,-4.02,1.17,1.5,1.09,0.04,">1 nonsynonymous","I72K N92T",2
"lib1","SARS-CoV-2","AAATGAATAGGGTTAT",6,70.42,8.33,-2.43,0.19,2.26,1.12,0.01,">1 nonsynonymous","G51K S113K",2
"lib1","SARS-CoV-2","AAATGAATATCCTGTC",4,81.01,10.43,-0.33,0.04,2.71,1.03,0,">1 nonsynonymous","N1M V37F I104S",3
"lib1","SARS-CoV-2","AAATGAATATTCGGGG",3,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R L183F K198V",3
"lib1","SARS-CoV-2","AAATGAATCCGCTTGT",7,88.3,10.17,-0.59,0.07,2.79,1,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","AAATGAATGCTGATAA",2,25.27,7.65,-3.12,0.34,1.5,1.09,0.04,">1 nonsynonymous","L38T T55M G117D",3
"lib1","SARS-CoV-2","AAATGAATGGCTACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* Y93K F134K",3
"lib1","SARS-CoV-2","AAATGAATTCCCGAAA",4,20.65,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","V65W Y91S A105M S129L",4
"lib1","SARS-CoV-2","AAATGAATTGCTAACA",5,75.72,6.07,-4.69,0.85,1.5,1.24,0.02,">1 nonsynonymous","V37L C61R R127N I138S",4
"lib1","SARS-CoV-2","AAATGAATTGGGACAG",4,57.13,8.76,-2.01,0.14,1.76,1.24,0.01,">1 nonsynonymous","N13S V37I P54T K114R T148S P169L",6
"lib1","SARS-CoV-2","AAATGACAACTCGTAT",12,155.95,9.66,-1.11,0.05,2.75,1.09,0,">1 nonsynonymous","L60K Q84K T170K T201R",4
"lib1","SARS-CoV-2","AAATGACACCTGGATT",2,20.33,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","AAATGACACTCCCTAT",2,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S41K L57F P82T E154K",5
"lib1","SARS-CoV-2","AAATGACCAAAGATAA",1,14.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S S69M L95F V103K T170A Q176G",6
"lib1","SARS-CoV-2","AAATGACCAGTTGACA",3,8.05,10.53,-0.23,0.12,3,1.04,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAATGACCATGACCCA",5,13.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N118L C150V",2
"lib1","SARS-CoV-2","AAATGACGAGCATATG",2,17.36,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S29G F44N Y91F D98Y C158Q",5
"lib1","SARS-CoV-2","AAATGACGCAAATTAA",1,1.09,NA,NA,NA,NA,NA,NA,"stop","D90S P149* T201A",3
"lib1","SARS-CoV-2","AAATGACGGGCAAGGA",3,1.12,NA,NA,NA,NA,NA,NA,"stop","A22G S43T C49R L57C I142*",5
"lib1","SARS-CoV-2","AAATGACTACCACATG",3,35.12,6.51,-4.25,0.55,1.5,1.12,0.04,">1 nonsynonymous","F17V D90C I138P",3
"lib1","SARS-CoV-2","AAATGACTATCGAGAC",7,32.44,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y50T K56L E141N C158S T201S",5
"lib1","SARS-CoV-2","AAATGACTCTTCAGAT",1,23.69,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L60T N92L",2
"lib1","SARS-CoV-2","AAATGACTGCATTATA",2,48.83,8.59,-2.18,0.2,1.5,1.13,0.01,">1 nonsynonymous","D112V S139N",2
"lib1","SARS-CoV-2","AAATGACTTAATCTTG",5,80.98,7.56,-3.21,0.34,1.5,1.06,0.04,">1 nonsynonymous","W23P Y35P Q144R",3
"lib1","SARS-CoV-2","AAATGAGAATTATGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","R25P A81R Y91* D97R E154K T170L",6
"lib1","SARS-CoV-2","AAATGAGACTTGTAAA",3,41.57,9.49,-1.28,0.12,2.3,1.07,0.01,">1 nonsynonymous","A105F F156A K198I",3
"lib1","SARS-CoV-2","AAATGAGAGGTAACAT",1,5.98,6.22,-4.54,2,1.5,1.16,0.08,">1 nonsynonymous","Y50I P82L E154R",3
"lib1","SARS-CoV-2","AAATGAGATCGAAAAG",5,94.11,10.11,-0.65,0.04,2.67,1.01,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","AAATGAGCAAAGCCAC",1,10.14,6,-4.76,2,3,1.11,0.03,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","AAATGAGCACCCTGCA",2,47.28,10.26,-0.5,0.07,2.93,1.03,0,">1 nonsynonymous","N120V S139R",2
"lib1","SARS-CoV-2","AAATGAGCAGTTCGAA",1,99.72,10.66,-0.1,0.03,2.9,1.05,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","AAATGAGCCTTCCATT",6,99.78,6,-4.76,1.82,1.5,1.17,0.01,">1 nonsynonymous","L5H V65R G86F G155S Y175N",5
"lib1","SARS-CoV-2","AAATGAGCGAAAAGCT",6,49.52,6,-4.76,1.35,1.5,1.15,0.01,">1 nonsynonymous","T63P K128R Y175P T201K",4
"lib1","SARS-CoV-2","AAATGAGCGTTGATCG",7,1.38,NA,NA,NA,NA,NA,NA,"stop","I2E V37* D98G",3
"lib1","SARS-CoV-2","AAATGAGCTAAAAAAC",8,208.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Q163E Q176F",2
"lib1","SARS-CoV-2","AAATGAGCTAATGATT",2,15.97,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I2S T63W V103D P133S",4
"lib1","SARS-CoV-2","AAATGAGCTCCAAACA",2,86.14,10.17,-0.6,0.06,2.72,1.08,0,">1 nonsynonymous","N4S G9I E135G",3
"lib1","SARS-CoV-2","AAATGAGGACAAAATC",3,28.51,10.81,0.04,0.1,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGAGGTTACCCGA",3,46.78,8.31,-2.45,0.17,1.68,1.14,0.01,">1 nonsynonymous","F62V R127L V194A",3
"lib1","SARS-CoV-2","AAATGAGTCTTAATTA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","C102* Y119V",2
"lib1","SARS-CoV-2","AAATGAGTTTTTAGAT",4,35.71,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G83V L95S A145S P149K",4
"lib1","SARS-CoV-2","AAATGATAACACTAGG",1,16.84,6,-4.76,0.7,1.5,1.08,0,">1 nonsynonymous","S41T P133N C158N",3
"lib1","SARS-CoV-2","AAATGATAGACTTGCC",4,85.85,10.06,-0.71,0.05,2.95,1,0,">1 nonsynonymous","T55H L125C",2
"lib1","SARS-CoV-2","AAATGATAGAGGCCAA",7,121.03,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F17L L38R D68R P177C",4
"lib1","SARS-CoV-2","AAATGATAGATATGCA",1,8.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K K114P E141R Q163Y K199M",5
"lib1","SARS-CoV-2","AAATGATAGGATACCA",2,33.48,10.02,-0.75,0.1,2.16,1.02,0,">1 nonsynonymous","Q84W N130S",2
"lib1","SARS-CoV-2","AAATGATATCTCCACA",5,121.58,10.68,-0.09,0.03,2.95,1.01,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","AAATGATCAAACTGGG",6,24.49,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","T3V R16F Y35G A42G I80K G152A N171Y",7
"lib1","SARS-CoV-2","AAATGATCGGTTTTAT",1,30.92,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","AAATGATCTGCAATAA",6,70.7,10.01,-0.75,0.06,2.92,1.02,0,">1 nonsynonymous","A145V G174D",2
"lib1","SARS-CoV-2","AAATGATCTGTAAGTG",1,10.48,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L95D L122M N130C P161Q",4
"lib1","SARS-CoV-2","AAATGATGAAAAAAGC",1,13.9,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S19Q C49L T55E K87I D98A N107R D137W Y175M",8
"lib1","SARS-CoV-2","AAATGATGAACCTGCT",1,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I R27K C61V N92T V103G K128H",6
"lib1","SARS-CoV-2","AAATGATTAAAATAGT",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142R A190G",2
"lib1","SARS-CoV-2","AAATGATTAGATCCAA",3,24.52,6.2,-4.57,0.88,1.5,1.36,0.04,">1 nonsynonymous","E10Q G86C I104V",3
"lib1","SARS-CoV-2","AAATGATTATATAATG",1,10.67,10.2,-0.56,0.12,2.98,1,0.01,">1 nonsynonymous","N58S I138P",2
"lib1","SARS-CoV-2","AAATGATTATCAATGG",1,44.42,9.91,-0.85,0.13,2,1.08,0.01,">1 nonsynonymous","K94S S184W",2
"lib1","SARS-CoV-2","AAATGATTTTATATTC",5,31.84,9.58,-1.18,0.16,1.92,1.13,0.01,">1 nonsynonymous","L5M T15C G155R",3
"lib1","SARS-CoV-2","AAATGATTTTTTAGAA",1,32.59,10.4,-0.37,0.07,2.81,1.03,0,">1 nonsynonymous","N24R Y91K",2
"lib1","SARS-CoV-2","AAATGCAAAATTATTG",7,13.61,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","Y66G D90Y N109K N157L",4
"lib1","SARS-CoV-2","AAATGCAAACGACCAG",3,24.45,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23V S139I",2
"lib1","SARS-CoV-2","AAATGCAATGAAAGCA",4,35.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6V F47M K94C Y121F",4
"lib1","SARS-CoV-2","AAATGCAATGTATTAA",2,10.5,8.69,-2.07,0.35,2.34,1.11,0.08,">1 nonsynonymous","N1R S113V K128R",3
"lib1","SARS-CoV-2","AAATGCACAAACTTCA",14,63.85,9.99,-0.78,0.1,2.37,1.04,0,">1 nonsynonymous","T3K D34L T55S",3
"lib1","SARS-CoV-2","AAATGCACATCAGCAG",2,47.48,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","W23E G83D T170V",3
"lib1","SARS-CoV-2","AAATGCACATGATAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38P G101H N120* Y143N Y159I",5
"lib1","SARS-CoV-2","AAATGCACCTTGCTCT",2,82.17,10.14,-0.63,0.06,2.89,1.03,0,"1 nonsynonymous","P177A",1
"lib1","SARS-CoV-2","AAATGCACTTATTCCT",5,70.67,10.52,-0.24,0.1,2.82,1.04,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","AAATGCAGAAAAATGA",2,11.56,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R25T P82I W106M G174R",4
"lib1","SARS-CoV-2","AAATGCAGATGCGAAC",3,40.51,6,-4.76,1.54,1.5,1.17,0.03,">1 nonsynonymous","F17Q Y91H N120C E141Y P149Y",5
"lib1","SARS-CoV-2","AAATGCAGGCTGGAAC",5,32.55,6,-4.76,2,1.5,1.22,0.04,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","AAATGCAGGTAAGATA",3,0.88,NA,NA,NA,NA,NA,NA,"stop","T15Q Y39* Y50F G146I N151V",5
"lib1","SARS-CoV-2","AAATGCAGGTTTAGCA",1,18.32,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","V180G",1
"lib1","SARS-CoV-2","AAATGCATAAAAATCA",5,76.06,10.8,0.03,0.07,2.82,1.12,0,">1 nonsynonymous","L5P S129R K198P",3
"lib1","SARS-CoV-2","AAATGCATAAACTGGA",5,132.58,10.7,-0.07,0.04,2.89,1.09,0,">1 nonsynonymous","G9A R73K D97K F156R Y175W",5
"lib1","SARS-CoV-2","AAATGCATAATGTGCA",4,22.25,10.85,0.09,0.06,2.98,1,0,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","AAATGCATACCGTTAA",1,98.47,9.06,-1.71,0.1,2.5,1.11,0,">1 nonsynonymous","G51M Y119R",2
"lib1","SARS-CoV-2","AAATGCATAGCAGAAA",10,129.7,10.25,-0.51,0.04,2.8,1.04,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","AAATGCATATATTATA",2,49.68,6,-4.76,1.72,1.5,1.31,0.05,">1 nonsynonymous","N64S A89T P96C",3
"lib1","SARS-CoV-2","AAATGCATCAATCGTT",12,132.96,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45L I138Q G152A N157P",4
"lib1","SARS-CoV-2","AAATGCATCATACGCT",4,96.4,10.46,-0.3,0.06,2.91,1.03,0,"1 nonsynonymous","R136I",1
"lib1","SARS-CoV-2","AAATGCATCGGAATGA",10,83.55,6.11,-4.66,1.24,1.5,1.3,0.03,">1 nonsynonymous","R78D D90F A105L",3
"lib1","SARS-CoV-2","AAATGCATTCAGATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N24E F126H S147*",3
"lib1","SARS-CoV-2","AAATGCCAAACTATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T46* K56Y P82A V103D P149I P197V",6
"lib1","SARS-CoV-2","AAATGCCAACAAGCAA",6,1.91,NA,NA,NA,NA,NA,NA,"stop","D59G I88M T100N T140* K198T",5
"lib1","SARS-CoV-2","AAATGCCAATTCGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","AAATGCCACCATACTA",2,43.39,9.08,-1.69,0.22,1.64,1.12,0.02,">1 nonsynonymous","N1R R16K S69I",3
"lib1","SARS-CoV-2","AAATGCCCTGTGTTAC",3,119.52,9.71,-1.05,0.14,1.73,1.18,0.01,">1 nonsynonymous","P96R N120F",2
"lib1","SARS-CoV-2","AAATGCCGAACTGAAG",1,22,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S41L K114T Y143N F167C",4
"lib1","SARS-CoV-2","AAATGCCGAGAATGAA",2,26.64,9.91,-0.86,0.2,2.23,1.02,0.01,">1 nonsynonymous","G9M S45I",2
"lib1","SARS-CoV-2","AAATGCCGTAGACACG",4,7.9,NA,NA,NA,NA,NA,NA,"stop","G51L T85F N120* T148V P161W",5
"lib1","SARS-CoV-2","AAATGCCGTCCTGATG",3,68.57,10.63,-0.13,0.05,2.9,1.07,0,">1 nonsynonymous","S29V K128T",2
"lib1","SARS-CoV-2","AAATGCCTGCAATACA",4,25.06,6.16,-4.6,1.2,1.5,1.12,0.03,">1 nonsynonymous","S43V D68V C102F",3
"lib1","SARS-CoV-2","AAATGCGAACTGCATC",3,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T D34M",2
"lib1","SARS-CoV-2","AAATGCGAGTATATAA",12,82.95,8.74,-2.02,0.19,1.5,1.17,0.01,">1 nonsynonymous","F8Q S129L R136Q",3
"lib1","SARS-CoV-2","AAATGCGATACTCACT",8,80.15,10.64,-0.12,0.05,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATGCGATTGTCCTT",3,12.89,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K56L F62R I104S Q144S",4
"lib1","SARS-CoV-2","AAATGCGCACTATTTC",1,9.52,7.27,-3.49,0.11,1.8,1.03,0.01,">1 nonsynonymous","N64L P96M R124P",3
"lib1","SARS-CoV-2","AAATGCGCGCAATGAA",1,10.34,6,-4.76,2,3,1.1,0,">1 nonsynonymous","K56P F70S N151L",3
"lib1","SARS-CoV-2","AAATGCGTTTAAAAGG",1,21.66,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","T3L R78K Q79K Y93R D98H Y121I D137S A145T",8
"lib1","SARS-CoV-2","AAATGCTAAATGCAAC",1,14.38,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S29G A67T P96K D112E Y121L",5
"lib1","SARS-CoV-2","AAATGCTAAATTATAG",7,79.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51I G155D P177Y",3
"lib1","SARS-CoV-2","AAATGCTAATGTTTAA",5,98.79,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","AAATGCTACACTGCCG",14,70.89,8.74,-2.02,0.19,1.5,1.17,0.01,">1 nonsynonymous","A14W T100N",2
"lib1","SARS-CoV-2","AAATGCTACCTCTTTC",1,51.2,10.85,0.08,0.08,2.9,1.06,0,">1 nonsynonymous","S53D G152K",2
"lib1","SARS-CoV-2","AAATGCTCGGTGTAAG",5,23.93,10.23,-0.53,0.13,2.23,1,0.01,"1 nonsynonymous","Y50I",1
"lib1","SARS-CoV-2","AAATGCTCTAATATGA",6,24.96,6.35,-4.41,0.64,1.5,1.12,0.03,">1 nonsynonymous","A22G Y50E D68M T170G",4
"lib1","SARS-CoV-2","AAATGCTGATACTGAT",1,7.52,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","C6R G166E",2
"lib1","SARS-CoV-2","AAATGCTGTACGATTC",5,96.14,10.91,0.14,0.09,2.87,1.04,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","AAATGCTGTGAACCTG",1,6.93,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F12R C61S K114A R179N",4
"lib1","SARS-CoV-2","AAATGCTGTTCATATT",1,9.15,10.49,-0.27,0.06,2.91,1.03,0,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","AAATGCTTAACATGCG",9,84.87,6,-4.76,1.04,1.5,1.14,0.01,">1 nonsynonymous","R25Q D34P G83I N110S",4
"lib1","SARS-CoV-2","AAATGCTTATCAAGAT",2,73.04,10.23,-0.53,0.08,2.82,1.04,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","AAATGCTTGAAGGACA",14,280.94,7.41,-3.36,0.13,1.52,1.16,0,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","AAATGGAAAACAATAC",2,29.35,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F99N W106M",2
"lib1","SARS-CoV-2","AAATGGAAGTTAACGG",5,0.5,NA,NA,NA,NA,NA,NA,"stop","E10D F44T G86D F99S I138*",5
"lib1","SARS-CoV-2","AAATGGACTAACCTAT",1,26.44,8.82,-1.95,0.12,2.61,1.05,0.01,">1 nonsynonymous","G166P K198Q",2
"lib1","SARS-CoV-2","AAATGGAGATAATTAT",2,46.29,8.78,-1.99,0.18,1.64,1.16,0.01,">1 nonsynonymous","D90Y A105C V173E",3
"lib1","SARS-CoV-2","AAATGGAGTCAGATAG",5,76.94,10.24,-0.52,0.03,2.85,1.01,0,">1 nonsynonymous","P7N T15P D34S Q84L",4
"lib1","SARS-CoV-2","AAATGGAGTCCACTGC",1,65.42,10.69,-0.08,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGGATAATAAAGC",3,24.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6G Y165Q",2
"lib1","SARS-CoV-2","AAATGGATACTGGAAT",2,10.61,7.29,-3.48,0.31,1.76,1.27,0.02,">1 nonsynonymous","V77G L122Q E154Q",3
"lib1","SARS-CoV-2","AAATGGATGTTGACCA",7,20.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N92W I104S T170K",3
"lib1","SARS-CoV-2","AAATGGATTGCCTCGC",1,17.74,10.61,-0.15,0.12,2.93,1.01,0.01,">1 nonsynonymous","Q84V P133A",2
"lib1","SARS-CoV-2","AAATGGCAATAGACAG",1,17.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60R N107T R124Y G166A",4
"lib1","SARS-CoV-2","AAATGGCAATTAACTT",2,10.18,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F44S V103M L122T N130S F167I",5
"lib1","SARS-CoV-2","AAATGGCACGAGGTTC",3,12.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C61E Q84Y L95D T100N I142F",5
"lib1","SARS-CoV-2","AAATGGCAGATAACAG",1,0.16,NA,NA,NA,NA,NA,NA,"stop","L60E V173S K198*",3
"lib1","SARS-CoV-2","AAATGGCAGGTTATCT",8,120.11,9.8,-0.97,0.08,2.55,1.09,0,">1 nonsynonymous","N120I G155C",2
"lib1","SARS-CoV-2","AAATGGCCAAATAGTA",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L T170P",2
"lib1","SARS-CoV-2","AAATGGCGCTAGACAA",1,17.63,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A22C C158L G166L",3
"lib1","SARS-CoV-2","AAATGGCTAATAATCC",2,76.04,10.72,-0.04,0.1,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGGCTAGTAATCC",5,70.47,10.74,-0.02,0.06,2.97,1.01,0,"1 nonsynonymous","S184G",1
"lib1","SARS-CoV-2","AAATGGGAATGAAGGG",2,6.39,7.41,-3.35,0.33,2,1.08,0.04,">1 nonsynonymous","C61T L125D F156S",3
"lib1","SARS-CoV-2","AAATGGGACGTAGTGA",9,74.4,6,-4.76,1.12,1.5,1.16,0.01,">1 nonsynonymous","V11L R136F L162S",3
"lib1","SARS-CoV-2","AAATGGGCCCGTATGA",2,27.52,10.41,-0.36,0.06,2.9,1.03,0,"1 nonsynonymous","N4W",1
"lib1","SARS-CoV-2","AAATGGGCGCGCAGAT",1,0.99,NA,NA,NA,NA,NA,NA,"stop","A105L Y119S V173P V182*",4
"lib1","SARS-CoV-2","AAATGGTAAGACCGTA",6,27.88,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","V103M Y121M Y143L",3
"lib1","SARS-CoV-2","AAATGGTACCAGTATT",4,77.2,10.61,-0.15,0.04,2.92,1.02,0,">1 nonsynonymous","A105M L122K",2
"lib1","SARS-CoV-2","AAATGGTATCGTAGGG",8,16.78,7.23,-3.53,0.33,1.5,1.06,0.03,">1 nonsynonymous","F44Y Y50K S69Q F99G T201L",5
"lib1","SARS-CoV-2","AAATGGTCGATGAACC",1,33.05,10.41,-0.36,0.06,2.92,1.03,0,">1 nonsynonymous","K87I E141V",2
"lib1","SARS-CoV-2","AAATGGTCTCTTAGCT",7,5.12,10.74,-0.03,0.15,2.78,1.02,0.01,">1 nonsynonymous","F99L K114T T201V",3
"lib1","SARS-CoV-2","AAATGGTCTCTTATTT",2,26.36,6,-4.76,2,1.5,1.33,0.03,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","AAATGGTGACCTAACG",2,17.08,10.68,-0.08,0.03,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGGTTATCTCACA",2,24.9,7.43,-3.34,0.23,2.05,1.11,0.01,">1 nonsynonymous","S139L Q144Y K198Y",3
"lib1","SARS-CoV-2","AAATGGTTGCTGTTAT",1,18.13,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F47Y L131G G155E",3
"lib1","SARS-CoV-2","AAATGTAAAACCATGA",11,173.85,10.71,-0.05,0.04,2.9,1.06,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","AAATGTAACACAACAT",1,54.6,10.28,-0.49,0.09,2.77,1,0,"1 nonsynonymous","G51D",1
"lib1","SARS-CoV-2","AAATGTAACCCGCAAC",9,50.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F47E K87R G166V G172V",4
"lib1","SARS-CoV-2","AAATGTAACTAACTTT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A T55I Q84V P133Y C150V",5
"lib1","SARS-CoV-2","AAATGTAAGTGTGAAT",1,30.38,10.18,-0.58,0.09,2.5,1.07,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","AAATGTAATATGAATC",4,21.23,6.33,-4.44,0.81,1.5,1.17,0.04,">1 nonsynonymous","A18L L60T Y119N T140Y K199Y",5
"lib1","SARS-CoV-2","AAATGTAATGGAAAAC",4,27.8,6.25,-4.52,0.57,1.5,1.14,0.01,">1 nonsynonymous","T3A V52N T100S I138M G152S N157T",6
"lib1","SARS-CoV-2","AAATGTACACGCTTAT",1,7.39,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","W106G C158L",2
"lib1","SARS-CoV-2","AAATGTACACGTAGAA",8,75.97,6.48,-4.28,0.36,1.5,1.17,0.01,">1 nonsynonymous","G86S S129I E135V",3
"lib1","SARS-CoV-2","AAATGTACCACATCAT",6,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102G R127M C150V",3
"lib1","SARS-CoV-2","AAATGTACCTAGCAAG",2,53.35,8.86,-1.9,0.16,1.72,1.16,0.01,">1 nonsynonymous","C31M L60Y Y178I",3
"lib1","SARS-CoV-2","AAATGTACGCGGCGAA",7,22.2,8.81,-1.96,0.34,1.5,1.05,0.07,">1 nonsynonymous","R127S Y165F",2
"lib1","SARS-CoV-2","AAATGTACTACTAAAA",6,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C Y93S I138R L188W",4
"lib1","SARS-CoV-2","AAATGTACTATATCAC",2,15.27,10.17,-0.59,0.07,2.88,1,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","AAATGTACTTAATGAG",3,29.97,10.7,-0.07,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATGTAGACACATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129F Y143R K199Y",3
"lib1","SARS-CoV-2","AAATGTAGGAGTTGAG",4,37.59,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A81F G86C N120P P149Q G172N",5
"lib1","SARS-CoV-2","AAATGTAGTAAATACC",10,83.24,10.44,-0.32,0.03,2.85,1.01,0,"1 nonsynonymous","F47Y",1
"lib1","SARS-CoV-2","AAATGTATCATGTCCT",3,59.77,10.8,0.03,0.09,2.89,1.08,0,">1 nonsynonymous","T140L P197M",2
"lib1","SARS-CoV-2","AAATGTATCGATTTCA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","R16L P133* P149L",3
"lib1","SARS-CoV-2","AAATGTATGGTGCCAA",4,73.17,10.65,-0.11,0.07,2.89,1.07,0,">1 nonsynonymous","R27I D59T",2
"lib1","SARS-CoV-2","AAATGTATTATTGACT",16,264.88,6,-4.76,0.92,1.5,1.17,0.01,">1 nonsynonymous","V77E P149C F156D T201R",4
"lib1","SARS-CoV-2","AAATGTCAACAGATGT",1,17.45,8.45,-2.31,0.31,2.2,1,0.04,">1 nonsynonymous","P54R A81T Y175S",3
"lib1","SARS-CoV-2","AAATGTCAACCCGACA",1,5.95,9.75,-1.02,0.19,2.79,1.08,0.02,">1 nonsynonymous","F44I I142L G155S",3
"lib1","SARS-CoV-2","AAATGTCAAGAACTTA",2,35.61,9.7,-1.07,0.1,2.32,1.13,0,">1 nonsynonymous","Y121S K128Y",2
"lib1","SARS-CoV-2","AAATGTCACGAGGGCA",1,20.43,10.47,-0.3,0.04,2.96,1,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","AAATGTCCATACCCTA",13,6.1,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib1","SARS-CoV-2","AAATGTCCCTATCCCC",1,25.49,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P54L N107S L125C N151I Y165R",5
"lib1","SARS-CoV-2","AAATGTCGATGCGACA",1,9.86,8.36,-2.41,0.24,1.72,1.13,0.02,">1 nonsynonymous","Y35Q N40R G51R Y119T",4
"lib1","SARS-CoV-2","AAATGTCGTTTGGAAC",2,8.03,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","D59E K94E A105H Y119I P133L",5
"lib1","SARS-CoV-2","AAATGTCTAGTAGATA",2,40.99,8.42,-2.34,0.22,2.02,1.15,0.01,"1 nonsynonymous","S113P",1
"lib1","SARS-CoV-2","AAATGTCTCAAATCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I28G P54D G152*",3
"lib1","SARS-CoV-2","AAATGTCTCAACAAAT",6,0.4,NA,NA,NA,NA,NA,NA,"stop","G51N C61T L183*",3
"lib1","SARS-CoV-2","AAATGTCTCAATAAAT",7,84.62,10.26,-0.5,0.03,2.91,1.03,0,"1 nonsynonymous","T170A",1
"lib1","SARS-CoV-2","AAATGTCTCCACCACG",9,115.14,10.53,-0.23,0.05,2.89,1,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","AAATGTGACGCCGTAG",9,129.7,9.18,-1.59,0.06,2.91,1.09,0,">1 nonsynonymous","K56R Q84A N157A",3
"lib1","SARS-CoV-2","AAATGTGCCCAATTGG",9,107.17,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28T Y66M D112L R136T",4
"lib1","SARS-CoV-2","AAATGTGGAGGTCTAT",5,68.7,6.05,-4.71,1.07,1.5,1.21,0.03,">1 nonsynonymous","F12G F62P N110I S129Q Q163H K198S",6
"lib1","SARS-CoV-2","AAATGTGGTCCTACTA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","F62* P133G G166C",3
"lib1","SARS-CoV-2","AAATGTGTACCTCGAG",5,100.07,10.49,-0.28,0.05,2.88,1.05,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","AAATGTGTTCTATTCC",2,9.6,10.4,-0.36,0.17,2.67,1.18,0.01,">1 nonsynonymous","L60K E135A",2
"lib1","SARS-CoV-2","AAATGTGTTTCGATAC",3,53.89,10.09,-0.67,0.1,2.7,1.09,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","AAATGTTAAAAATAAA",3,9.98,6.11,-4.65,0.5,1.5,1.07,0,">1 nonsynonymous","E10G V71G I104S S113T D137G V182N",6
"lib1","SARS-CoV-2","AAATGTTAACTTTAGT",5,20.21,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","S41P N58S Y93V Y178F",4
"lib1","SARS-CoV-2","AAATGTTAAGCCAATA",1,6.28,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I72R K114R G152Y G174L Y178C P197R",6
"lib1","SARS-CoV-2","AAATGTTACAATATTT",2,50.7,10.72,-0.04,0.09,2.95,1.04,0,"1 nonsynonymous","N151D",1
"lib1","SARS-CoV-2","AAATGTTATACACGCA",1,25.15,10.53,-0.24,0.05,2.9,1.02,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","AAATGTTATACCCGCT",4,142.97,10.04,-0.72,0.09,2.38,1.04,0,">1 nonsynonymous","Y39G F62E V153G",3
"lib1","SARS-CoV-2","AAATGTTATCCAGTAC",6,67.76,9.76,-1,0.1,2.29,1.04,0,">1 nonsynonymous","P54C G155W",2
"lib1","SARS-CoV-2","AAATGTTCAAAATCCG",8,132.25,10.75,-0.01,0.06,2.94,1.04,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","AAATGTTCACACTTTA",7,126.95,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37S D68Y E76D Y159D S200Q",5
"lib1","SARS-CoV-2","AAATGTTCTGTTATCC",2,15.95,6.45,-4.31,0.37,1.5,1.15,0.01,">1 nonsynonymous","Y39I T55A F99H P133Q S184I",5
"lib1","SARS-CoV-2","AAATGTTGAGAACTTG",2,18.56,8.24,-2.52,0.45,1.5,1.35,0.07,">1 nonsynonymous","S19R E154D",2
"lib1","SARS-CoV-2","AAATGTTGCAGTCACT",7,2.64,NA,NA,NA,NA,NA,NA,"stop","C158S P169*",2
"lib1","SARS-CoV-2","AAATGTTGCCAAAGCG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E A105V",2
"lib1","SARS-CoV-2","AAATGTTGCGATAATT",8,0.81,NA,NA,NA,NA,NA,NA,"stop","F99I E135A V181*",3
"lib1","SARS-CoV-2","AAATGTTTCGTCCACT",5,0.96,NA,NA,NA,NA,NA,NA,"stop","L5Y S19M D97T S129I Q163*",5
"lib1","SARS-CoV-2","AAATGTTTCTCAAACG",2,8.6,6.89,-3.88,0.61,1.96,1,0.05,">1 nonsynonymous","F47R D137P Q176E",3
"lib1","SARS-CoV-2","AAATGTTTGACATGAA",2,22.76,8.65,-2.11,0.25,1.5,1.18,0.03,">1 nonsynonymous","F12W Q84W",2
"lib1","SARS-CoV-2","AAATGTTTTGCCAAAT",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V F44S F62L Q168F V182I",5
"lib1","SARS-CoV-2","AAATGTTTTTGTACAT",3,37.1,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","D34W G51V Y165P H189N",4
"lib1","SARS-CoV-2","AAATTAAAAAATAATA",6,99.56,10.05,-0.71,0.07,2.69,1.04,0,">1 nonsynonymous","S19D G152S",2
"lib1","SARS-CoV-2","AAATTAAAAACGAAAC",4,120.75,10.76,-0.01,0.06,2.9,1.05,0,"1 nonsynonymous","V115T",1
"lib1","SARS-CoV-2","AAATTAAAAATATACC",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C S69M P82S W106K F134D K199L",6
"lib1","SARS-CoV-2","AAATTAAAATACCTCG",2,96.19,8.49,-2.27,0.13,2.29,1.06,0.01,">1 nonsynonymous","Y35T G117L",2
"lib1","SARS-CoV-2","AAATTAAAATGACGTT",2,13.93,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6N N58Y V65L R73C F160P",5
"lib1","SARS-CoV-2","AAATTAAAATTTTTGG",5,217.71,8.51,-2.26,0.12,2.88,1.06,0.01,">1 nonsynonymous","D97T S129A Q168K",3
"lib1","SARS-CoV-2","AAATTAAACGGTCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* I80R W106M K114M",4
"lib1","SARS-CoV-2","AAATTAAACTCTCGAT",5,83.13,10.79,0.03,0.08,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATTAAAGAAAAGAT",1,17.4,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","G9M V71H",2
"lib1","SARS-CoV-2","AAATTAAAGCACTCAC",8,157.07,6.12,-4.64,0.45,1.5,1.13,0.01,">1 nonsynonymous","T140L C150R",2
"lib1","SARS-CoV-2","AAATTAAATAAAAGCA",6,77.56,9.67,-1.1,0.07,2.81,1.05,0,">1 nonsynonymous","Q144P G174W S184C",3
"lib1","SARS-CoV-2","AAATTAAATACAATTT",2,73.3,7.86,-2.9,0.14,2.24,1.12,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","AAATTAAATCAACTCA",3,32.85,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N13T N171K",2
"lib1","SARS-CoV-2","AAATTAAATCAGGGAG",5,36.14,6,-4.76,2,3,1.19,0,">1 nonsynonymous","V77G G155S P169N A192D",4
"lib1","SARS-CoV-2","AAATTAAATTATAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S45L W106R E135*",3
"lib1","SARS-CoV-2","AAATTAAATTGTCGCA",7,29.14,10.15,-0.61,0.06,2.86,1.03,0,">1 nonsynonymous","K48I D59G D90T P197S",4
"lib1","SARS-CoV-2","AAATTAACAAACGCAC",5,38.9,10.31,-0.46,0.06,2.9,1,0,">1 nonsynonymous","F47L D98S",2
"lib1","SARS-CoV-2","AAATTAACCTTTCATA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","R16P Y50I D90* V115S F160S Q176P",6
"lib1","SARS-CoV-2","AAATTAACGCGACTAG",3,26.52,9.91,-0.86,0.18,2.24,1.07,0.01,">1 nonsynonymous","A14S V37Y D98W",3
"lib1","SARS-CoV-2","AAATTAACGGTTAGTA",3,47.83,10.68,-0.09,0.02,2.91,1.03,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","AAATTAACTACCAGAT",2,0.91,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAATTAAGAGGCAACA",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F C49M G83L",3
"lib1","SARS-CoV-2","AAATTAAGCCAGTGGG",6,36.64,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N1M F8V R73E I80Q G83L",5
"lib1","SARS-CoV-2","AAATTAAGCCCCTATG",3,19.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14L Y21S D98L",3
"lib1","SARS-CoV-2","AAATTAAGCCTGGTTA",5,119.54,8.77,-2,0.09,2.78,1.12,0,">1 nonsynonymous","V65L Y143T",2
"lib1","SARS-CoV-2","AAATTAAGGACGTCAA",1,2.34,NA,NA,NA,NA,NA,NA,"stop","F17W K128* N151K",3
"lib1","SARS-CoV-2","AAATTAAGGTTAACTA",1,16.41,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","Y121M C158H",2
"lib1","SARS-CoV-2","AAATTAAGTATGAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* A105V",2
"lib1","SARS-CoV-2","AAATTAATAAAAAACA",5,26.67,10.15,-0.62,0.05,2.67,1.02,0,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","AAATTAATAATCTTGC",3,1.04,NA,NA,NA,NA,NA,NA,"stop","L5S T15I V71W I104S Y143* Q168I",6
"lib1","SARS-CoV-2","AAATTAATAGTGTAAT",2,21.81,6,-4.76,1.51,3,1.16,0.02,">1 nonsynonymous","E10L A67P V103W Y121G D137M G152N",6
"lib1","SARS-CoV-2","AAATTAATGATGGCTG",2,106.38,10.15,-0.61,0.05,2.84,1.01,0,">1 nonsynonymous","C61H N107P T201D",3
"lib1","SARS-CoV-2","AAATTAATGGTGAAAA",4,80.59,10.69,-0.07,0.08,2.88,1.09,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","AAATTAATTAATACGT",1,70.95,10.48,-0.29,0.05,2.92,1.03,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","AAATTAATTGCTAATT",1,27.05,10.76,-0.01,0.09,2.98,1.01,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","AAATTAATTTTAGTAA",2,1.92,NA,NA,NA,NA,NA,NA,"stop","D34T G74A A89* V103H P149* F167G",6
"lib1","SARS-CoV-2","AAATTACAAAGAGTGG",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A A14S D68E G86S",4
"lib1","SARS-CoV-2","AAATTACAACAAATGT",5,40.42,10.44,-0.32,0.07,2.92,1,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","AAATTACAAGAAACGG",2,27.9,9.91,-0.85,0.08,2.74,1,0,">1 nonsynonymous","C49F T201M",2
"lib1","SARS-CoV-2","AAATTACAAGCATATA",9,44.57,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S19L L60R Y143R",3
"lib1","SARS-CoV-2","AAATTACAATTTGAAT",3,1.45,NA,NA,NA,NA,NA,NA,"stop","L60Y T100Q K132*",3
"lib1","SARS-CoV-2","AAATTACACGAGCCTT",4,69.63,9.9,-0.87,0.07,1.99,1.05,0,">1 nonsynonymous","L38S T63R",2
"lib1","SARS-CoV-2","AAATTACACGATAGAG",1,16.08,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","I28Y K56S F99I W106L G146L",5
"lib1","SARS-CoV-2","AAATTACAGCAACAAT",1,16.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S A105D",2
"lib1","SARS-CoV-2","AAATTACAGGCTCAAT",7,72.48,6,-4.76,1.88,1.5,1.31,0.03,">1 nonsynonymous","R25S Y39Q D98T F167Y",4
"lib1","SARS-CoV-2","AAATTACATACCAGAT",4,31.59,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L5N N64I P82H N110L",4
"lib1","SARS-CoV-2","AAATTACATACTGTTC",1,16.03,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56P C150K F160V",3
"lib1","SARS-CoV-2","AAATTACATAGTAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84R V173*",2
"lib1","SARS-CoV-2","AAATTACATATGATCA",3,8.67,10.75,-0.02,0.11,2.81,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTACCAATGGCAA",2,50.34,7.08,-3.68,0.12,1.83,1.07,0,"1 nonsynonymous","Q168P",1
"lib1","SARS-CoV-2","AAATTACCAGTTACAA",1,9.65,9.89,-0.87,0.1,1.92,1.09,0.01,">1 nonsynonymous","F44V F99Y",2
"lib1","SARS-CoV-2","AAATTACCCCAGCATA",5,29.09,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","Y35V Y91I D98V T140L N157D Y165K",6
"lib1","SARS-CoV-2","AAATTACCGCTAAACT",4,0.87,NA,NA,NA,NA,NA,NA,"stop","I2P F62* E141L",3
"lib1","SARS-CoV-2","AAATTACGAAGAACTT",2,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V I142E N157V",3
"lib1","SARS-CoV-2","AAATTACGAGGATGTA",2,20.49,10.69,-0.07,0.06,2.98,1.01,0,"1 nonsynonymous","F160C",1
"lib1","SARS-CoV-2","AAATTACGATCTACCC",6,43.04,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F70K R127S P149V G155S",4
"lib1","SARS-CoV-2","AAATTACGATTAACCA",3,33.5,7.76,-3,0.27,1.5,1.08,0.02,">1 nonsynonymous","N4W K94L A190C",3
"lib1","SARS-CoV-2","AAATTACGATTCAATC",6,0.3,NA,NA,NA,NA,NA,NA,"stop","T15L N92*",2
"lib1","SARS-CoV-2","AAATTACGTACTCCGG",4,48.45,6.04,-4.72,0.46,1.5,1.14,0.01,">1 nonsynonymous","T3R E10V N24R I88G D98W V103C G155L T201L",8
"lib1","SARS-CoV-2","AAATTACGTGATTACC",2,27.08,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A14R N30K G86L",3
"lib1","SARS-CoV-2","AAATTACTACCAATTT",21,433.85,8.57,-2.19,0.11,2.85,1.05,0,"1 nonsynonymous","S113Y",1
"lib1","SARS-CoV-2","AAATTACTAGTTTCGT",3,74.53,8.73,-2.04,0.2,1.5,1.16,0.01,">1 nonsynonymous","S36Q P82L A192L",3
"lib1","SARS-CoV-2","AAATTACTATACAGTA",2,26.19,10.1,-0.67,0.11,2.37,1.03,0.01,">1 nonsynonymous","R25S N171H",2
"lib1","SARS-CoV-2","AAATTACTATGGTATC",2,11.2,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","I2E F70P A81K",3
"lib1","SARS-CoV-2","AAATTACTCAAAGTCC",1,22.4,10.57,-0.19,0.07,2.92,1.05,0,">1 nonsynonymous","T100V A105G",2
"lib1","SARS-CoV-2","AAATTACTTAAAAAAT",4,56.91,8.9,-1.86,0.09,2.76,1.13,0,">1 nonsynonymous","N107E S129I F156P",3
"lib1","SARS-CoV-2","AAATTACTTACTCATT",7,2.4,NA,NA,NA,NA,NA,NA,"stop","C49L I72L F99* N107H K114P S129I V180Y",7
"lib1","SARS-CoV-2","AAATTACTTTAATGTA",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69Q D90Q E154Y",3
"lib1","SARS-CoV-2","AAATTAGAAAGCCCTG",2,82.74,8.86,-1.91,0.08,2.88,1.1,0,"1 nonsynonymous","G166Y",1
"lib1","SARS-CoV-2","AAATTAGAACACCAGA",2,32.08,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N1D A89T N107F L122Y",4
"lib1","SARS-CoV-2","AAATTAGAAGGGGGAT",4,31.8,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9V C49K T63S F134R",4
"lib1","SARS-CoV-2","AAATTAGAAGTGGTCA",3,47.28,10.56,-0.21,0.07,2.87,1.08,0,">1 nonsynonymous","V52F I142L F160Y",3
"lib1","SARS-CoV-2","AAATTAGAATACCTAA",2,48.44,10.07,-0.7,0.1,2.82,1,0,">1 nonsynonymous","Y91N G155Q",2
"lib1","SARS-CoV-2","AAATTAGACAAGAACC",3,24.2,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T55P V71P L95I G155A",4
"lib1","SARS-CoV-2","AAATTAGACAGCCATT",4,48.26,10.7,-0.06,0.03,2.97,1.01,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","AAATTAGATAGGCCAT",7,80.04,10.77,0.01,0.07,2.89,1.06,0,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","AAATTAGATATAATAT",1,26.13,6.03,-4.73,0.95,1.5,1.11,0.02,">1 nonsynonymous","G101T Y175S",2
"lib1","SARS-CoV-2","AAATTAGATTGTATAA",7,145.18,10.22,-0.54,0.06,2.41,1,0,">1 nonsynonymous","N1Y S147P Y178L",3
"lib1","SARS-CoV-2","AAATTAGGAATGCTGA",4,2.36,NA,NA,NA,NA,NA,NA,"stop","C61P D97*",2
"lib1","SARS-CoV-2","AAATTAGGAGAGCCGG",8,55.32,9.13,-1.63,0.21,1.5,1.04,0.02,">1 nonsynonymous","S36L F47N",2
"lib1","SARS-CoV-2","AAATTAGGATAATGGT",8,48.61,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G152N F167G",2
"lib1","SARS-CoV-2","AAATTAGGATACTTGG",4,82.57,10.47,-0.3,0.06,2.84,1.07,0,">1 nonsynonymous","T46F E141G",2
"lib1","SARS-CoV-2","AAATTAGGCATAAAAT",2,21.91,10.63,-0.14,0.06,2.96,1,0,">1 nonsynonymous","T140I K198R",2
"lib1","SARS-CoV-2","AAATTAGGCGAATCGA",2,17.31,9.77,-0.99,0.12,2.28,1.04,0.01,">1 nonsynonymous","N40T N58K G152W",3
"lib1","SARS-CoV-2","AAATTAGGCGATACCT",1,7.36,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F99S W106E",2
"lib1","SARS-CoV-2","AAATTAGGCGTCTACG",3,60.7,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","Y66I Y91R Y121K",3
"lib1","SARS-CoV-2","AAATTAGGTGAAAACG",3,17.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y39N V77T Y175V",3
"lib1","SARS-CoV-2","AAATTAGGTGTTCCGC",7,120.99,10.78,0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTAGTAAATCAAA",1,12.66,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6V K48R G101L T140S G174E",5
"lib1","SARS-CoV-2","AAATTAGTACGACTAA",1,19.75,10.17,-0.59,0.13,2.73,1.08,0.01,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","AAATTAGTCCTGACAA",2,45.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12L I142S C150T",3
"lib1","SARS-CoV-2","AAATTAGTCTTATTAT",4,1.07,NA,NA,NA,NA,NA,NA,"stop","N64R N110T G117* S129M F160S",5
"lib1","SARS-CoV-2","AAATTAGTGACTTACG",6,5.19,6,-4.76,2,1.5,1.04,0.02,">1 nonsynonymous","D68K F99L T201E",3
"lib1","SARS-CoV-2","AAATTAGTGTCCCGAA",2,17.7,9.79,-0.97,0.14,1.86,1.01,0.01,">1 nonsynonymous","N1I D97S L122R S139V G155S",5
"lib1","SARS-CoV-2","AAATTAGTGTTGAAAA",4,8.48,7.15,-3.62,0.31,2.09,1.18,0.01,">1 nonsynonymous","S43P T55A G83D K114P G152S S164Y S184G L188S",8
"lib1","SARS-CoV-2","AAATTAGTTAGAAGCA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","AAATTAGTTCTAAGTG",1,26.89,10.75,-0.01,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTAGTTCTGATAC",1,1.67,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib1","SARS-CoV-2","AAATTATAACTCCGTT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","T3F L60* P197H",3
"lib1","SARS-CoV-2","AAATTATAAGAGAGTA",1,23.83,10.74,-0.02,0.1,2.86,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAATTATAGAAATATT",3,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L A33D Y91A T201L",4
"lib1","SARS-CoV-2","AAATTATAGCATAATC",2,77.93,10.76,0,0.06,2.92,1.05,0,">1 nonsynonymous","D97W P197K",2
"lib1","SARS-CoV-2","AAATTATAGCCTTCCG",3,44.15,6.33,-4.43,0.59,1.5,1.23,0.03,">1 nonsynonymous","F12M Q84P K128T",3
"lib1","SARS-CoV-2","AAATTATATTGTTTAT",1,9.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F44R I88R D98S",3
"lib1","SARS-CoV-2","AAATTATCATTGAATG",2,34.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44N R124Y R136Y E154H",4
"lib1","SARS-CoV-2","AAATTATCCATGACAA",3,87.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5S V37S L95V R124L",4
"lib1","SARS-CoV-2","AAATTATCCCACAACA",1,34.48,10.13,-0.64,0.05,2.96,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","AAATTATCGAAAGCTG",9,72.01,8.62,-2.14,0.2,1.56,1.21,0.01,">1 nonsynonymous","S19A T63S T148S G152V",4
"lib1","SARS-CoV-2","AAATTATCTGCGATGC",12,161.77,10.68,-0.08,0.07,2.93,1.06,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","AAATTATCTTAACTAA",2,7.8,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y35C R179L",2
"lib1","SARS-CoV-2","AAATTATCTTGCGACA",1,11.33,9.13,-1.63,0.1,2.64,1.21,0.01,"1 nonsynonymous","G166W",1
"lib1","SARS-CoV-2","AAATTATCTTGGCAAA",2,8.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N T63S D98W Y121A",4
"lib1","SARS-CoV-2","AAATTATGCCCATGTT",3,41.54,9.67,-1.1,0.17,1.93,1.15,0.01,">1 nonsynonymous","E10M L57S A192T",3
"lib1","SARS-CoV-2","AAATTATGTTTTAAGC",4,37.9,10.24,-0.53,0.11,2.41,1.02,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","AAATTATTAACAAACA",2,17.91,6.13,-4.64,1.36,1.5,1.22,0.07,">1 nonsynonymous","C6L Y39L Y93A F156N Q163Y",5
"lib1","SARS-CoV-2","AAATTATTACTCAAAA",2,15.13,6,-4.76,2,3,1.04,0,">1 nonsynonymous","G51A A89F V103A K114G I142C G152S N157S",7
"lib1","SARS-CoV-2","AAATTATTATTACAAT",1,28.02,10.78,0.02,0.05,2.97,1,0,">1 nonsynonymous","N4Q T140S",2
"lib1","SARS-CoV-2","AAATTATTATTGGGAG",4,58.79,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44Y C61T G83L P96L T140R",5
"lib1","SARS-CoV-2","AAATTATTTAAATATA",7,121.33,7.73,-3.03,0.13,2.08,1.15,0,">1 nonsynonymous","N64S K87N N157R",3
"lib1","SARS-CoV-2","AAATTATTTGCACAAT",5,25.35,9.42,-1.35,0.19,2.09,1.08,0.02,"1 nonsynonymous","V77F",1
"lib1","SARS-CoV-2","AAATTCAAACCACAGT",1,21.22,10.04,-0.72,0.15,2.01,1.08,0.01,">1 nonsynonymous","A42C V71L G152D",3
"lib1","SARS-CoV-2","AAATTCAACCCTTAAA",3,8.54,10.09,-0.67,0.64,1.66,1,0.05,">1 nonsynonymous","N13I G116K",2
"lib1","SARS-CoV-2","AAATTCAACGAAGTGC",8,66.46,6.04,-4.72,0.86,1.5,1.17,0.01,">1 nonsynonymous","P54S S113M Y119W C158S",4
"lib1","SARS-CoV-2","AAATTCACAAACAACG",8,62.39,10.83,0.07,0.08,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTCACAAAGTATA",1,12.9,10.24,-0.53,0.24,2.16,1.04,0.04,">1 nonsynonymous","A22E P96Y P197Y",3
"lib1","SARS-CoV-2","AAATTCACAAATATTA",9,48.75,7.05,-3.71,0.28,1.5,1.16,0.02,">1 nonsynonymous","D90S V103I N107R T140D",4
"lib1","SARS-CoV-2","AAATTCACACATGAGG",2,1.59,NA,NA,NA,NA,NA,NA,"stop","F12C A18R V103F I142*",4
"lib1","SARS-CoV-2","AAATTCACCGTTTAAC",1,36.1,10.23,-0.54,0.08,2.83,1,0,">1 nonsynonymous","R16I S184D",2
"lib1","SARS-CoV-2","AAATTCAGCAATCGCA",2,9.43,10.66,-0.11,0.15,2.85,1.15,0.01,">1 nonsynonymous","H189S P197S",2
"lib1","SARS-CoV-2","AAATTCAGCTGACCAA",9,132.72,9.93,-0.83,0.04,2.9,1.04,0,">1 nonsynonymous","I142W T148S",2
"lib1","SARS-CoV-2","AAATTCAGGATCTGAA",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A81E Y93I I104S Y123E F134S",6
"lib1","SARS-CoV-2","AAATTCATACTCATCA",4,71.8,8.57,-2.19,0.08,2.74,1.03,0,"1 nonsynonymous","S113I",1
"lib1","SARS-CoV-2","AAATTCATCGAATGTA",4,80.4,10.07,-0.7,0.07,2.77,1.01,0,"1 nonsynonymous","C6Q",1
"lib1","SARS-CoV-2","AAATTCCAAAACCGTG",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T F99H",2
"lib1","SARS-CoV-2","AAATTCCACGCCAACT",3,45.61,10.65,-0.11,0.06,2.98,1,0,">1 nonsynonymous","V37R A145S",2
"lib1","SARS-CoV-2","AAATTCCACTCCATTG",1,13.08,7.74,-3.02,0.26,2.68,1.2,0.02,">1 nonsynonymous","V37L I142D Q168F Y175N",4
"lib1","SARS-CoV-2","AAATTCCAGTCACGAC",3,2.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAATTCCCAATTGGAT",3,64,6.98,-3.79,0.35,1.5,1.21,0.02,">1 nonsynonymous","D68V Y143F",2
"lib1","SARS-CoV-2","AAATTCCCTATCACCA",4,22.11,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K56I Q84A P96L N107K",4
"lib1","SARS-CoV-2","AAATTCCGAAACATCT",9,106.47,10.8,0.04,0.08,2.9,1.06,0,">1 nonsynonymous","L122R V173A T201S",3
"lib1","SARS-CoV-2","AAATTCCGAAGAAAAT",5,90.1,8.59,-2.17,0.16,1.5,1.12,0.01,">1 nonsynonymous","E10M G86S",2
"lib1","SARS-CoV-2","AAATTCCGCGTTAGCG",4,14.49,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V77K A81M P133N G146L Q163W T170E S184N",7
"lib1","SARS-CoV-2","AAATTCCGGAATAGAT",8,99.1,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K26G Y50S Y119D",3
"lib1","SARS-CoV-2","AAATTCCTACGAAGAA",6,52.55,8.84,-1.92,0.11,2.41,1.17,0.01,"1 nonsynonymous","P161N",1
"lib1","SARS-CoV-2","AAATTCCTGCCTTTAC",4,58.1,10.37,-0.4,0.08,2.9,1.08,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","AAATTCCTTGGATCAT",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T V182Y",2
"lib1","SARS-CoV-2","AAATTCCTTTACTGGA",4,91.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9V Y66E K114R F167Y A190L",5
"lib1","SARS-CoV-2","AAATTCGAACAAATCA",3,50.85,9.87,-0.9,0.14,2.47,1.06,0.01,">1 nonsynonymous","T55H K87Y W106L F160S Y178F",5
"lib1","SARS-CoV-2","AAATTCGACGAGGCCA",6,120.76,10.45,-0.32,0.05,2.78,1.04,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","AAATTCGACTAAAAAC",2,101.27,10.15,-0.62,0.04,2.83,1,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","AAATTCGAGAGTTCTG",2,0.6,NA,NA,NA,NA,NA,NA,"stop","Y39S V52G I104V Q144R L183*",5
"lib1","SARS-CoV-2","AAATTCGATATGTGAA",1,38.48,8.81,-1.95,0.1,2.01,1.14,0.01,">1 nonsynonymous","N107L N130I",2
"lib1","SARS-CoV-2","AAATTCGCAGTTGCTG",2,22.28,6.03,-4.73,1.36,1.5,1.26,0.03,"1 nonsynonymous","I88S",1
"lib1","SARS-CoV-2","AAATTCGGACATGGTA",1,5.34,10.37,-0.39,0.15,2.8,1.15,0.01,"1 nonsynonymous","P54G",1
"lib1","SARS-CoV-2","AAATTCGGACGGTATA",2,2.93,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAATTCGTGCCGTGCA",1,61.55,9.81,-0.95,0.12,2.04,1.11,0,">1 nonsynonymous","Q84W N120L",2
"lib1","SARS-CoV-2","AAATTCTAATAACATG",2,6.87,8.37,-2.4,0.28,1.5,1.03,0.05,">1 nonsynonymous","V52L N64M A89Y T201D",4
"lib1","SARS-CoV-2","AAATTCTATTAGAAAA",2,25.3,6,-4.76,0.78,1.5,1.09,0,">1 nonsynonymous","K48V I104T N120R N157Y F167G",5
"lib1","SARS-CoV-2","AAATTCTGAAACATAA",5,64.27,10.09,-0.68,0.09,2.46,1.05,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","AAATTCTGAATTAATA",5,19.44,6.4,-4.36,0.49,1.5,1.17,0.02,">1 nonsynonymous","A18E I28K N107S",3
"lib1","SARS-CoV-2","AAATTCTGCGCTAGTG",2,7.48,7.84,-2.92,0.36,2.95,1.31,0.02,">1 nonsynonymous","P7G K94N V103E E141V Y178P",5
"lib1","SARS-CoV-2","AAATTCTGGCTTCCTT",3,45.12,10.46,-0.31,0.06,2.89,1.05,0,">1 nonsynonymous","F62D D98N",2
"lib1","SARS-CoV-2","AAATTCTGTACATGAA",7,4.77,NA,NA,NA,NA,NA,NA,"stop","I2M F8V K26R Q84* S129L",5
"lib1","SARS-CoV-2","AAATTCTTCCGCCACT",3,16.66,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","G9L P96N R179Y",3
"lib1","SARS-CoV-2","AAATTCTTTAGCATGA",4,20.07,6,-4.76,2,2.19,1.2,0.01,">1 nonsynonymous","P7Y W23L N30G C49T P54V I72H S139T",7
"lib1","SARS-CoV-2","AAATTGAACAAAAAAA",4,86.42,8.49,-2.27,0.15,2.6,1.03,0.01,"1 nonsynonymous","Q176G",1
"lib1","SARS-CoV-2","AAATTGAAGAGAACGG",4,24.58,10.61,-0.16,0.06,2.97,1.02,0,"1 nonsynonymous","T100V",1
"lib1","SARS-CoV-2","AAATTGAATCTGTGGC",2,27.55,10.54,-0.23,0.09,2.7,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTGAATGTGATTG",2,54.33,9.97,-0.8,0.16,2.19,1.04,0.01,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","AAATTGAATTAGTAAG",2,29.53,10.72,-0.04,0.08,2.92,1.01,0,">1 nonsynonymous","A42P S200W",2
"lib1","SARS-CoV-2","AAATTGACCTCTACAG",15,145.44,9.66,-1.11,0.09,2.12,1.08,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","AAATTGACTACTAAAC",8,0.35,NA,NA,NA,NA,NA,NA,"stop","W23* V52Y P82S Q176E T201P",5
"lib1","SARS-CoV-2","AAATTGACTGCAAAAT",15,223.43,10.26,-0.5,0.03,2.84,1.02,0,">1 nonsynonymous","Y35V F47L",2
"lib1","SARS-CoV-2","AAATTGACTGCGGGAC",7,49.51,9.12,-1.64,0.19,1.5,1,0.02,">1 nonsynonymous","V71S D90N",2
"lib1","SARS-CoV-2","AAATTGACTGGTAACC",9,5.38,NA,NA,NA,NA,NA,NA,"stop","G51E G117*",2
"lib1","SARS-CoV-2","AAATTGAGCACACAAC",5,87.05,10.05,-0.71,0.06,2.85,1,0,">1 nonsynonymous","T85S A145R",2
"lib1","SARS-CoV-2","AAATTGAGGTCAAAAT",12,225.56,10.65,-0.11,0.05,2.89,1.06,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","AAATTGATAAATAAAG",1,16.45,6.45,-4.32,0.39,1.5,1.13,0.01,">1 nonsynonymous","F99P H189Y",2
"lib1","SARS-CoV-2","AAATTGATAAGATCAC",2,40.39,10.36,-0.41,0.06,2.92,1,0,">1 nonsynonymous","S36L P149C",2
"lib1","SARS-CoV-2","AAATTGATAATCGCTT",4,79.34,10.77,0,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTGATAGGAAAGA",5,48.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T55E F99S G174I",3
"lib1","SARS-CoV-2","AAATTGATTACAGAGT",1,49.66,10.73,-0.03,0.07,2.83,1,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","AAATTGATTATGAAAA",4,43.78,6,-4.76,0.88,1.5,1.13,0.01,">1 nonsynonymous","F8E P82L",2
"lib1","SARS-CoV-2","AAATTGCAAAAAAACG",2,35.16,9.63,-1.13,0.14,2.56,1.06,0.01,">1 nonsynonymous","S36L I104M I138E P169Y",4
"lib1","SARS-CoV-2","AAATTGCAAAATTGAA",1,10.87,10.57,-0.19,0.06,2.96,1.04,0,">1 nonsynonymous","D97K T201H",2
"lib1","SARS-CoV-2","AAATTGCACGAAACCT",4,41.41,10.03,-0.74,0.07,2.82,1.03,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","AAATTGCCCCTCCCAG",3,105.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T R16I L38N T85M",4
"lib1","SARS-CoV-2","AAATTGCCTCGTAATT",2,22.59,6.55,-4.21,0.51,1.5,1.21,0.04,">1 nonsynonymous","F8S A14F T85P",3
"lib1","SARS-CoV-2","AAATTGCGACATAATC",1,33.71,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","G74T T85F C158T",3
"lib1","SARS-CoV-2","AAATTGCGGAAACGCA",4,27,6.36,-4.4,0.64,1.5,1.15,0.04,">1 nonsynonymous","C6F P7V D90Y G117V V153P",5
"lib1","SARS-CoV-2","AAATTGCTATTGGTGT",6,41.85,9.23,-1.53,0.19,1.59,1.15,0.01,"1 nonsynonymous","P96Y",1
"lib1","SARS-CoV-2","AAATTGCTCACAACTC",6,44.06,7.79,-2.97,0.19,1.77,1.15,0.01,">1 nonsynonymous","K128A N157K L183F",3
"lib1","SARS-CoV-2","AAATTGCTCCGGATTA",4,44.34,10.65,-0.11,0.04,2.94,1.02,0,"1 nonsynonymous","F126L",1
"lib1","SARS-CoV-2","AAATTGCTGACCAAAA",2,17.19,6.23,-4.54,0.41,2.89,1.11,0.02,">1 nonsynonymous","V20E G74L A81T Y165H",4
"lib1","SARS-CoV-2","AAATTGCTGTAAGAAT",5,1.05,NA,NA,NA,NA,NA,NA,"stop","V37* D59W G117S",3
"lib1","SARS-CoV-2","AAATTGGAAGAGTGAA",1,23.3,6,-4.76,0.46,3,1.09,0,">1 nonsynonymous","W23K Y50L N58M Y121I Q163T",5
"lib1","SARS-CoV-2","AAATTGGAGTACTTCC",3,16.26,8.92,-1.84,0.32,1.69,1.13,0.05,">1 nonsynonymous","F12W C61H D90S D98S",4
"lib1","SARS-CoV-2","AAATTGGAGTGACACG",5,48.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3G F12S W23K",3
"lib1","SARS-CoV-2","AAATTGGAGTTGACAA",5,78.87,9.4,-1.36,0.04,2.88,1.07,0,">1 nonsynonymous","N120D I142R",2
"lib1","SARS-CoV-2","AAATTGGCATGACAAA",3,0.79,NA,NA,NA,NA,NA,NA,"stop","S19M V37*",2
"lib1","SARS-CoV-2","AAATTGGCTCGATTCT",1,93.76,10.78,0.02,0.04,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AAATTGGGATTATAGC",1,31.32,9.87,-0.9,0.08,2.57,1.11,0,">1 nonsynonymous","F99Y G174S",2
"lib1","SARS-CoV-2","AAATTGGGGTGCGTAA",5,82.13,8.99,-1.78,0.12,1.84,1.15,0.01,">1 nonsynonymous","Y39H I88M S184G",3
"lib1","SARS-CoV-2","AAATTGGTACGTTGAT",4,49.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107R R136F T201D",3
"lib1","SARS-CoV-2","AAATTGGTGGATAAAC",2,32.3,9.57,-1.2,0.11,1.94,1.13,0,">1 nonsynonymous","C61P A89S F134E",3
"lib1","SARS-CoV-2","AAATTGGTTCGAACCT",3,13.99,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","D59I V181Q",2
"lib1","SARS-CoV-2","AAATTGTAAAGATCGC",1,29.65,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S139C N157V",2
"lib1","SARS-CoV-2","AAATTGTAATGATATT",1,6.79,6,-4.76,1.79,1.5,1.13,0.04,">1 nonsynonymous","D34C C102A Y123D",3
"lib1","SARS-CoV-2","AAATTGTACGACGCGC",6,54.17,8.63,-2.13,0.16,1.82,1.14,0.01,"1 nonsynonymous","G74T",1
"lib1","SARS-CoV-2","AAATTGTAGCTTCAAT",1,47.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39H P96I T140S Y178I",4
"lib1","SARS-CoV-2","AAATTGTAGGAGTCAT",8,115.89,10.33,-0.43,0.06,2.88,1.03,0,">1 nonsynonymous","K87T P149I",2
"lib1","SARS-CoV-2","AAATTGTAGGTCAAAC",3,33.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R127M R136N I142D",3
"lib1","SARS-CoV-2","AAATTGTATTACAGGC",3,20.26,6,-4.76,2,1.5,1.12,0.02,"1 nonsynonymous","G101F",1
"lib1","SARS-CoV-2","AAATTTAAAACTCCGG",2,29.37,9.58,-1.18,0.23,1.65,1.22,0.02,">1 nonsynonymous","G9P D97M R136N",3
"lib1","SARS-CoV-2","AAATTTAAACATGCCA",2,72.36,6.46,-4.31,0.46,1.5,1.08,0.02,">1 nonsynonymous","G9R R78T Y91N N109Q G117V A145R",6
"lib1","SARS-CoV-2","AAATTTAAACGGATTC",6,211.72,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9V Y39H N110V P177H",4
"lib1","SARS-CoV-2","AAATTTAAACGTTTTA",4,29.36,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","A18Q A42T F62K P82Q R136F F160S",6
"lib1","SARS-CoV-2","AAATTTAAACTATCCA",10,79.42,6.18,-4.58,0.81,1.5,1.14,0.03,">1 nonsynonymous","A42W Y91Q N107G G116L T140A",5
"lib1","SARS-CoV-2","AAATTTAAAGAGAACT",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122M V173P V181G",3
"lib1","SARS-CoV-2","AAATTTAAATTCCCGC",1,45.83,9.22,-1.54,0.31,1.5,1.06,0.05,">1 nonsynonymous","W23M S41T",2
"lib1","SARS-CoV-2","AAATTTAACCAACGAT",1,48.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6V T100M C158K",3
"lib1","SARS-CoV-2","AAATTTAACGATGGTG",1,8,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","W106V C158Y V173G",3
"lib1","SARS-CoV-2","AAATTTAACGTAAGCG",19,2645.52,9.86,-0.91,0.07,2.18,1.03,0,">1 nonsynonymous","Y21T N151L",2
"lib1","SARS-CoV-2","AAATTTAAGAGCGGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61N T85S Y91* C102L F167S S184V",6
"lib1","SARS-CoV-2","AAATTTAAGTATAGCA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D34G A42Y G83S L131V E154*",5
"lib1","SARS-CoV-2","AAATTTAATACTCGTA",1,5.7,6.36,-4.41,1.03,3,1.08,0.01,">1 nonsynonymous","N92R A105M F160N",3
"lib1","SARS-CoV-2","AAATTTAATAGCTCAC",1,21.12,10.19,-0.58,0.09,2.77,1,0,"1 nonsynonymous","Y21C",1
"lib1","SARS-CoV-2","AAATTTAATTGACCAT",1,17.71,10.32,-0.45,0.06,2.79,1.12,0,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","AAATTTACAGGGGCGG",7,75.22,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T55S I104H N107L A145V",4
"lib1","SARS-CoV-2","AAATTTACATTCTCAG",3,39.92,10.87,0.11,0.08,2.94,1.01,0,"1 nonsynonymous","R16V",1
"lib1","SARS-CoV-2","AAATTTACCATTGAAA",1,12.12,10.48,-0.28,0.07,2.97,1.05,0,">1 nonsynonymous","T55S L60I N130K S164G",4
"lib1","SARS-CoV-2","AAATTTACGGTGGATG",1,35.45,6.1,-4.66,1.08,1.5,1.21,0.04,">1 nonsynonymous","F44A N64S T85Y F134I",4
"lib1","SARS-CoV-2","AAATTTACTCGCAGGC",7,76.33,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K87Q W106N G155F",3
"lib1","SARS-CoV-2","AAATTTATAAGCAACA",6,143.15,6,-4.76,1.04,1.5,1.15,0.01,"1 nonsynonymous","R124Q",1
"lib1","SARS-CoV-2","AAATTTATATTCTCAT",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60W P133S",2
"lib1","SARS-CoV-2","AAATTTATCAAATATG",2,52,9.97,-0.79,0.11,2.06,1.03,0,"1 nonsynonymous","W106H",1
"lib1","SARS-CoV-2","AAATTTATCAACTCAC",2,45.67,9.17,-1.59,0.19,1.5,1.08,0.02,">1 nonsynonymous","T3H L131Y",2
"lib1","SARS-CoV-2","AAATTTATCATAAGAA",5,29.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V103S K128T",2
"lib1","SARS-CoV-2","AAATTTATGAGTAGTA",2,24.8,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F47T I88T P96S Q168T",4
"lib1","SARS-CoV-2","AAATTTATTGATTAAA",2,25.44,6.19,-4.58,0.52,1.5,1.15,0.01,">1 nonsynonymous","L38V P96Q A105W",3
"lib1","SARS-CoV-2","AAATTTCAACATAATA",10,116.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T Y121D",2
"lib1","SARS-CoV-2","AAATTTCACATCCCAA",2,16.4,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V37G I88S N92V V103W V181N",5
"lib1","SARS-CoV-2","AAATTTCACGCTTGAT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","N40* P96M V103E E141I G172M",5
"lib1","SARS-CoV-2","AAATTTCAGAAAAATA",3,67.72,10.84,0.08,0.1,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTTCATACGAATG",1,55.96,10.27,-0.49,0.09,2.73,1.02,0,">1 nonsynonymous","F12L S53R K114E A192L",4
"lib1","SARS-CoV-2","AAATTTCATGAAAGAG",3,84.52,10.42,-0.34,0.06,2.86,1.06,0,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","AAATTTCATGTCGTAA",8,38.49,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","C102R",1
"lib1","SARS-CoV-2","AAATTTCATTTATGAG",1,30.45,10.25,-0.51,0.05,2.86,1.03,0,">1 nonsynonymous","F44L L111Y",2
"lib1","SARS-CoV-2","AAATTTCCACTTTCAA",1,13.17,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G101R K114T P133Y",3
"lib1","SARS-CoV-2","AAATTTCCATCTTCGT",1,41.61,10.81,0.05,0.05,2.94,1.04,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","AAATTTCGACGTTGGA",3,20.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K87G D112V Y121L",3
"lib1","SARS-CoV-2","AAATTTCTAAGCAGAA",3,82.24,10.08,-0.69,0.09,2.66,1.03,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","AAATTTCTCAAAATAT",2,37.91,10.83,0.07,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTTCTCCAGGGTA",15,803.4,10.77,0,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAATTTCTTAGATAAA",3,62.14,7,-3.76,0.25,1.5,1.1,0.02,">1 nonsynonymous","P96R A145Y",2
"lib1","SARS-CoV-2","AAATTTCTTTGCGATT",3,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L K87T P96W T140P",4
"lib1","SARS-CoV-2","AAATTTGAAACAAAAC",2,15.74,7.57,-3.2,0.48,1.5,1.18,0.05,">1 nonsynonymous","A89Y D97N N120Y",3
"lib1","SARS-CoV-2","AAATTTGAAAGCTTTC",3,78.02,10.71,-0.05,0.05,2.94,1.05,0,"1 nonsynonymous","C195I",1
"lib1","SARS-CoV-2","AAATTTGAATGTACGT",13,130.43,10.79,0.02,0.06,2.94,1.02,0,"1 nonsynonymous","N64Y",1
"lib1","SARS-CoV-2","AAATTTGACGCGTGCT",3,15.01,10.62,-0.14,0.09,2.88,1.08,0.01,">1 nonsynonymous","A33G F160W",2
"lib1","SARS-CoV-2","AAATTTGACTGAACCG",2,25.52,10.85,0.09,0.1,2.96,1,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","AAATTTGATGGTAAAA",6,35.24,7.67,-3.1,0.28,1.5,1.22,0.03,">1 nonsynonymous","K94F E141I",2
"lib1","SARS-CoV-2","AAATTTGATTTTAATA",1,43.49,10.09,-0.68,0.12,2.03,1.07,0,">1 nonsynonymous","K26M Y35R L122M S129Y Q168F",5
"lib1","SARS-CoV-2","AAATTTGCAGAAACTT",1,26.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N13V D34G D68G V153S",4
"lib1","SARS-CoV-2","AAATTTGCAGTTTTAG",3,25.79,10.79,0.02,0.08,2.87,1.05,0,">1 nonsynonymous","Y35T N58S N171Y",3
"lib1","SARS-CoV-2","AAATTTGCCATACAAA",6,195.65,10.31,-0.45,0.05,2.84,1.04,0,">1 nonsynonymous","N13R Y50W",2
"lib1","SARS-CoV-2","AAATTTGCCGAATGAG",2,10.35,8.67,-2.1,0.19,2.05,1.2,0.04,">1 nonsynonymous","A33S G117L",2
"lib1","SARS-CoV-2","AAATTTGCCTACCATT",6,45.53,8.42,-2.34,0.25,1.57,1.17,0.02,">1 nonsynonymous","V37L A105G N157R",3
"lib1","SARS-CoV-2","AAATTTGCGCTTATAA",4,100.82,10.69,-0.07,0.09,2.85,1.08,0,"1 nonsynonymous","G83M",1
"lib1","SARS-CoV-2","AAATTTGCGTTCTTAT",2,10.16,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","N13C G117F P133L",3
"lib1","SARS-CoV-2","AAATTTGCTAGTTAGA",3,90.17,8.91,-1.85,0.13,1.8,1.11,0.01,">1 nonsynonymous","D34A T140K G146T",3
"lib1","SARS-CoV-2","AAATTTGGCACAACAA",3,26.48,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A33K F47L Y119L G152I Y175I",5
"lib1","SARS-CoV-2","AAATTTGTATGTACAG",2,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D Y50W P96Q F134A V181R",5
"lib1","SARS-CoV-2","AAATTTGTCCATATTC",8,12.84,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37A L95P F167L",3
"lib1","SARS-CoV-2","AAATTTTAAAAGGATC",14,135.22,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N107T R136A S164V",3
"lib1","SARS-CoV-2","AAATTTTAATGATCTA",1,47.49,6.36,-4.4,0.82,1.5,1.24,0.04,">1 nonsynonymous","N1S L162E",2
"lib1","SARS-CoV-2","AAATTTTAGTACGTAA",5,22.18,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T3I L95C Q176H",3
"lib1","SARS-CoV-2","AAATTTTATGTATATA",1,12.72,6.17,-4.59,1.25,1.5,1.29,0.05,">1 nonsynonymous","N13Q D68Q G83A Y93S G101L",5
"lib1","SARS-CoV-2","AAATTTTCAATATGTT",5,47.46,10.75,-0.01,0.05,2.9,1.04,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","AAATTTTCAATCGCGT",8,61.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43A F62V N92K C102V",4
"lib1","SARS-CoV-2","AAATTTTCAGAAGCAT",6,25.54,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3N C31F Y39I D68V",4
"lib1","SARS-CoV-2","AAATTTTCAGCTATAT",1,140.03,10.65,-0.11,0.06,2.87,1.07,0,"1 nonsynonymous","N64G",1
"lib1","SARS-CoV-2","AAATTTTCCTCAAATT",3,2.74,NA,NA,NA,NA,NA,NA,"stop","V20R K56P V77* G174L",4
"lib1","SARS-CoV-2","AAATTTTCCTCGTAAG",2,1.11,NA,NA,NA,NA,NA,NA,"stop","C31F G51F V71R G174*",4
"lib1","SARS-CoV-2","AAATTTTCGGGTCACT",3,100.59,10.29,-0.48,0.08,2.65,1.04,0,">1 nonsynonymous","E135S P149L",2
"lib1","SARS-CoV-2","AAATTTTCTAAAATAT",9,51.58,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6I Y35H G86E T148M",4
"lib1","SARS-CoV-2","AAATTTTGAATCGAAA",3,28.21,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S19Y I28Q N107L V115Q F126C F156S T201L",7
"lib1","SARS-CoV-2","AAATTTTGACTTTCAG",4,32.73,10.72,-0.04,0.07,2.9,1.02,0,">1 nonsynonymous","L5W K132M",2
"lib1","SARS-CoV-2","AAATTTTGCGCGAATA",2,115.92,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5H R136I G172K",3
"lib1","SARS-CoV-2","AAATTTTTATTCACAG",7,71.46,10.63,-0.13,0.06,2.9,1.02,0,">1 nonsynonymous","N58L P197R",2
"lib1","SARS-CoV-2","AAATTTTTCTCTTTTA",4,7.71,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V11Y G51N V71E V103M G116W L125Y P133Q L187K",8
"lib1","SARS-CoV-2","AAATTTTTGAAACTTA",4,61.43,10.4,-0.36,0.04,2.94,1.02,0,">1 nonsynonymous","V37L G116I K199I",3
"lib1","SARS-CoV-2","AAATTTTTGGATAAAT",5,2.9,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","AAATTTTTTCCTCGTG",1,0.99,NA,NA,NA,NA,NA,NA,"stop","F8C I104V G116*",3
"lib1","SARS-CoV-2","AAATTTTTTGTATACG",6,46.74,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N30M G83K T100A Y165R",4
"lib1","SARS-CoV-2","AACAAAAAAAACGATA",2,119.11,10.57,-0.2,0.04,2.82,1.09,0,">1 nonsynonymous","A33Y Y123V K128I",3
"lib1","SARS-CoV-2","AACAAAAAAAGCCCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C A22R D34S P149L L183N",5
"lib1","SARS-CoV-2","AACAAAAAAATATAAG",1,27.4,10.81,0.05,0.1,2.81,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAAAAAGCCGAAG",3,39.43,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","S19T N171R",2
"lib1","SARS-CoV-2","AACAAAAAAGCCTGTA",4,42.39,10.38,-0.39,0.04,2.95,1.01,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","AACAAAAAAGTGGTCG",2,16.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49Q S164L P191M",3
"lib1","SARS-CoV-2","AACAAAAAATCAATAG",1,96.42,8.79,-1.98,0.27,1.5,1.01,0.03,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","AACAAAAAATTCTACC",2,52.28,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A14T V52K K114V G146L",4
"lib1","SARS-CoV-2","AACAAAAACCAGAAAT",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L E135A",2
"lib1","SARS-CoV-2","AACAAAAACCGACAAT",2,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T S53F G116V F134Y S200G",5
"lib1","SARS-CoV-2","AACAAAAACGATTGCA",1,6.01,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","G86S S113P G117T T201R",4
"lib1","SARS-CoV-2","AACAAAAACGTCCAAA",3,26.05,10.2,-0.56,0.11,2.83,1.04,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","AACAAAAAGAACGCTA",2,18.94,10.28,-0.48,0.09,2.88,1.02,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","AACAAAAAGATACGTG",2,40.44,8.64,-2.13,0.11,2.46,1.05,0,"1 nonsynonymous","N109P",1
"lib1","SARS-CoV-2","AACAAAAATCAAATAC",2,37.06,8.35,-2.42,0.14,2.37,1.08,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","AACAAAAATGCAACAT",7,318.1,10.72,-0.05,0.04,2.93,1.03,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","AACAAAAATTATATGA",2,40,9.08,-1.68,0.13,2.52,1.13,0.01,">1 nonsynonymous","D34P F44N",2
"lib1","SARS-CoV-2","AACAAAACAAGTGTAA",16,32.49,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","K26W D34K P96C",3
"lib1","SARS-CoV-2","AACAAAACAGTCGTGC",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46Q V103L",2
"lib1","SARS-CoV-2","AACAAAACCGCCACGG",4,13.6,8.97,-1.8,0.07,2.98,1.02,0,">1 nonsynonymous","N1P G146K S200V",3
"lib1","SARS-CoV-2","AACAAAACGAAACATA",10,112.35,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","W23Q N64Q S129G C150F",4
"lib1","SARS-CoV-2","AACAAAACGAAAGCGA",2,14.22,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G51C V103L S139R E154F P161W",5
"lib1","SARS-CoV-2","AACAAAACGTCAATGA",3,37.8,6,-4.76,2,3,1.15,0,"1 nonsynonymous","F167K",1
"lib1","SARS-CoV-2","AACAAAACTACCTTTT",4,65.32,9.93,-0.83,0.11,2.17,1.08,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","AACAAAAGAACTTCGA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","R16* W106A Y175W",3
"lib1","SARS-CoV-2","AACAAAAGACACTACA",3,5.31,6.57,-4.2,1.51,3,1.02,0,">1 nonsynonymous","G9S V37E T85L Y91A G117Y G166R",6
"lib1","SARS-CoV-2","AACAAAAGGATCTAAC",8,131.58,10.31,-0.46,0.04,2.96,1,0,">1 nonsynonymous","S36N G83N G116I K128S V153E",5
"lib1","SARS-CoV-2","AACAAAAGGGGTCTAA",4,49.02,6,-4.76,2,3,1.19,0,">1 nonsynonymous","L5T I28T P96C",3
"lib1","SARS-CoV-2","AACAAAAGTAATATAC",1,5.79,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A67N S147R E154R",3
"lib1","SARS-CoV-2","AACAAAATACTAAGTA",5,46.04,6,-4.76,1.8,1.5,1.21,0.03,">1 nonsynonymous","R16I T46I T100P",3
"lib1","SARS-CoV-2","AACAAAATAGCAGTGG",2,13.89,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","N107G Y119F I142S",3
"lib1","SARS-CoV-2","AACAAAATAGGATTGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71W",1
"lib1","SARS-CoV-2","AACAAAATCCAGAGAT",9,117.65,10.65,-0.11,0.06,2.91,1.05,0,"1 nonsynonymous","K48V",1
"lib1","SARS-CoV-2","AACAAAATCTTATGTC",4,0.89,NA,NA,NA,NA,NA,NA,"stop","C6T S45N V52T P149F V180*",5
"lib1","SARS-CoV-2","AACAAAATGGCTCCTA",1,56.25,10.57,-0.2,0.04,2.9,1.02,0,">1 nonsynonymous","T140D T148E G155W Q168Y",4
"lib1","SARS-CoV-2","AACAAAATTAAAGTCC",1,11.75,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A42Y T46M V71S F99A G155C",5
"lib1","SARS-CoV-2","AACAAAATTGAATAGG",2,35.72,10.29,-0.48,0.08,2.86,1,0,">1 nonsynonymous","K114R R136S",2
"lib1","SARS-CoV-2","AACAAACAAACGTAAC",5,50.46,10.35,-0.41,0.04,2.83,1,0,">1 nonsynonymous","N13H K128A",2
"lib1","SARS-CoV-2","AACAAACAAACTATAA",6,86.22,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36P L183C",2
"lib1","SARS-CoV-2","AACAAACAAATATCGT",3,31.11,10.79,0.02,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAACAATATAATC",1,17.22,9.52,-1.24,0.29,1.62,1.22,0.04,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","AACAAACACCTAAGTA",2,17.08,6.66,-4.1,0.31,1.5,1.17,0.01,">1 nonsynonymous","S43N G83V N157Y V173H",4
"lib1","SARS-CoV-2","AACAAACAGCCCCCTT",2,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y T46M V71S F99A G155C",5
"lib1","SARS-CoV-2","AACAAACAGTGGAACG",4,13.57,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","AACAAACATAGAGACT",4,11.42,9.8,-0.96,0.11,2.69,1.14,0.01,">1 nonsynonymous","N118G T201V",2
"lib1","SARS-CoV-2","AACAAACATTAGGTCT",5,101.11,9.27,-1.49,0.05,2.87,1.08,0,">1 nonsynonymous","I2Y V37Q K48I Y119E",4
"lib1","SARS-CoV-2","AACAAACATTATTAAG",5,73.88,10.7,-0.06,0.07,2.88,1.08,0,"1 nonsynonymous","N1M",1
"lib1","SARS-CoV-2","AACAAACCAAATAGCC",8,113.51,10.7,-0.06,0.05,2.9,1.05,0,"1 nonsynonymous","A192D",1
"lib1","SARS-CoV-2","AACAAACCACACGATG",2,22.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T100P R179H",2
"lib1","SARS-CoV-2","AACAAACCATTACCAT",2,79.23,10.74,-0.03,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAACCCGACCAGG",1,15.42,10.31,-0.45,0.12,2.79,1.04,0.01,">1 nonsynonymous","D90Y K199N",2
"lib1","SARS-CoV-2","AACAAACCGCATCCCG",2,11.35,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","S19K N30Q Y91F K128M N151L",5
"lib1","SARS-CoV-2","AACAAACCTAAAAAAA",4,1.79,NA,NA,NA,NA,NA,NA,"stop","V11L C49*",2
"lib1","SARS-CoV-2","AACAAACCTAAACTGC",4,9.39,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","N1K L5T S41I D68I G117D",5
"lib1","SARS-CoV-2","AACAAACCTAGACTTT",4,65.3,6.88,-3.88,0.35,1.5,1.15,0.03,">1 nonsynonymous","D90S R136T G146T N151H",4
"lib1","SARS-CoV-2","AACAAACCTAGCGAAA",16,112.68,9.6,-1.16,0.13,1.82,1.11,0.01,"1 nonsynonymous","I28K",1
"lib1","SARS-CoV-2","AACAAACCTTTAAACG",1,53.08,10.72,-0.04,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAACGAATATGCT",3,84.13,7.73,-3.04,0.12,1.68,1.13,0,">1 nonsynonymous","A18T N110L G146S N171D",4
"lib1","SARS-CoV-2","AACAAACGCCAGAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* L60K I80S Y91T T100Y L125T",6
"lib1","SARS-CoV-2","AACAAACGCTCTCTTG",3,49.81,10.01,-0.75,0.11,2.49,1.03,0,">1 nonsynonymous","S45R L57N L122S",3
"lib1","SARS-CoV-2","AACAAACGTAAAATTC",4,0,NA,NA,NA,NA,NA,NA,"stop","C61Y I104V A192*",3
"lib1","SARS-CoV-2","AACAAACGTCCGCTTA",2,8.44,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C6L W23I V37I G146M",4
"lib1","SARS-CoV-2","AACAAACGTGACCTGT",5,21.71,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35M F47L D68Q R124K V182L",5
"lib1","SARS-CoV-2","AACAAACGTGACTAAA",8,111.59,10.23,-0.53,0.03,2.87,1.04,0,">1 nonsynonymous","V32K K56G S147T P169Y",4
"lib1","SARS-CoV-2","AACAAACGTTCACATG",5,255.84,8.6,-2.16,0.1,2.51,1.06,0,">1 nonsynonymous","K87H Q176W",2
"lib1","SARS-CoV-2","AACAAACTAAATAGAT",1,11.67,6,-4.76,2,3,1.21,0,">1 nonsynonymous","F8T G86I N92S",3
"lib1","SARS-CoV-2","AACAAACTACAGTCAA",13,3.55,NA,NA,NA,NA,NA,NA,"stop","N64M K94M G117A L131*",4
"lib1","SARS-CoV-2","AACAAACTATACGCTG",6,62.84,10.27,-0.5,0.07,2.89,1,0,">1 nonsynonymous","S41F G116V",2
"lib1","SARS-CoV-2","AACAAACTGATTGTAC",1,28.06,8.48,-2.29,0.31,1.5,1,0.03,">1 nonsynonymous","K94H Y121L P161S T170S",4
"lib1","SARS-CoV-2","AACAAACTGGACACTG",1,15.95,8,-2.76,0.28,1.78,1.16,0.02,">1 nonsynonymous","V37Q S43A R179T",3
"lib1","SARS-CoV-2","AACAAACTTCCCAGTC",2,66.61,10.74,-0.02,0.05,2.96,1.01,0,">1 nonsynonymous","C61L V173R",2
"lib1","SARS-CoV-2","AACAAACTTGTATAAA",8,54.1,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","P96W W106F",2
"lib1","SARS-CoV-2","AACAAACTTGTCACAC",3,17.56,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","I2K K128R R136N V181K",4
"lib1","SARS-CoV-2","AACAAAGAAAACTTGG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","F44T F99P K128*",3
"lib1","SARS-CoV-2","AACAAAGAAATAAAAT",4,32.62,8.73,-2.03,0.14,1.5,1.1,0.01,">1 nonsynonymous","A67I P96V",2
"lib1","SARS-CoV-2","AACAAAGAAGGCACGT",3,44.49,9.62,-1.14,0.21,1.75,1.11,0.02,">1 nonsynonymous","L38T N64L",2
"lib1","SARS-CoV-2","AACAAAGAAGTGTAAT",2,65.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10R G86V A105L Q176K",4
"lib1","SARS-CoV-2","AACAAAGATGAAAAAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C49M R73M P82Q A89* Y119L P149K",6
"lib1","SARS-CoV-2","AACAAAGATGATGGAT",3,54.2,6.61,-4.15,0.33,1.5,1.14,0.02,">1 nonsynonymous","L60V R73T I104R K128V E135M",5
"lib1","SARS-CoV-2","AACAAAGATGTTACTA",2,35.85,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","W106L N171D",2
"lib1","SARS-CoV-2","AACAAAGCAAGAGCAA",3,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82I V103S E141K Q168H",4
"lib1","SARS-CoV-2","AACAAAGCAGCCGTGA",8,2.64,NA,NA,NA,NA,NA,NA,"stop","F8N G116* E135K",3
"lib1","SARS-CoV-2","AACAAAGCCCACGGGA",4,45.2,6.95,-3.81,0.59,1.5,1.2,0.08,">1 nonsynonymous","A14W L57Y K132P S164T",4
"lib1","SARS-CoV-2","AACAAAGCCTCCGGCG",1,36.51,8.83,-1.94,0.11,2.68,1.15,0.01,">1 nonsynonymous","S41G G117V",2
"lib1","SARS-CoV-2","AACAAAGGAAAGTTAA",5,34.82,10.46,-0.31,0.05,2.98,1.01,0,">1 nonsynonymous","V37T T85L D98N",3
"lib1","SARS-CoV-2","AACAAAGGAATCCACA",6,102.85,10.88,0.12,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAAGGAGTGACCC",5,0.07,NA,NA,NA,NA,NA,NA,"stop","C6* N13L A145S",3
"lib1","SARS-CoV-2","AACAAAGGATTATCAA",1,46.2,8.24,-2.52,0.14,2.34,1.14,0.01,">1 nonsynonymous","L5S G146L",2
"lib1","SARS-CoV-2","AACAAAGGCAAGTTAC",7,99.74,10.8,0.03,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAAGGCTAAATAA",3,47.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9L N40V I80A Y165H",4
"lib1","SARS-CoV-2","AACAAAGGGTGCCCGT",8,240.45,8.38,-2.38,0.26,1.5,1.01,0.03,">1 nonsynonymous","G51Y G152C K198V",3
"lib1","SARS-CoV-2","AACAAAGTAGTTTAGC",7,54.48,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y50C K87T T100N R127I T148Y F160S",6
"lib1","SARS-CoV-2","AACAAAGTCTAATACA",7,104.57,10.78,0.01,0.06,2.92,1.06,0,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","AACAAAGTGCTGTAAC",8,97.36,6.31,-4.45,0.8,1.5,1.32,0.03,">1 nonsynonymous","T3Q N64K V182L",3
"lib1","SARS-CoV-2","AACAAAGTTTCCCATT",6,0.05,NA,NA,NA,NA,NA,NA,"stop","L60C T148*",2
"lib1","SARS-CoV-2","AACAAATAAAATTACC",9,84.97,10.8,0.03,0.06,2.93,1.04,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","AACAAATAAAGGAGCC",5,143.48,10.21,-0.55,0.03,2.96,1,0,">1 nonsynonymous","V37F N64H D98L S113G T201L",5
"lib1","SARS-CoV-2","AACAAATAATAGAACT",2,59.36,8.33,-2.44,0.27,1.5,1.06,0.03,">1 nonsynonymous","R25V D68A",2
"lib1","SARS-CoV-2","AACAAATAATATTAAA",8,89.29,6,-4.76,1.78,1.5,1.24,0.01,">1 nonsynonymous","V20Y K26R I72E A81G N107Y Q176S",6
"lib1","SARS-CoV-2","AACAAATAATTATTTT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C P54K W106K R124T",4
"lib1","SARS-CoV-2","AACAAATACAAAAATT",7,66.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28Q R73N K87P",3
"lib1","SARS-CoV-2","AACAAATACTAAACAT",4,20.32,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","F17S A33D G83C E141T",4
"lib1","SARS-CoV-2","AACAAATAGAAAAATA",1,14.14,10.44,-0.32,0.22,1.94,1,0.02,">1 nonsynonymous","D59P S108T Y123M",3
"lib1","SARS-CoV-2","AACAAATAGATAATAT",6,50.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S53W Q84T V115G R136E",4
"lib1","SARS-CoV-2","AACAAATAGGAAAATT",7,73.78,9.74,-1.02,0.12,1.9,1.07,0.01,">1 nonsynonymous","G9T P82I",2
"lib1","SARS-CoV-2","AACAAATATAAGACTG",2,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A105I",2
"lib1","SARS-CoV-2","AACAAATATGTTGGAA",4,34.06,8.54,-2.23,0.14,2.42,1.14,0.01,">1 nonsynonymous","F44P Y119A P149G",3
"lib1","SARS-CoV-2","AACAAATCAATTAAAA",3,42.84,8.28,-2.48,0.09,2.1,1.03,0,">1 nonsynonymous","Q176T L187Y",2
"lib1","SARS-CoV-2","AACAAATCCCAGCTTA",3,54.07,8.65,-2.11,0.29,1.67,1.33,0.03,">1 nonsynonymous","A14W T55L F156Q",3
"lib1","SARS-CoV-2","AACAAATCTTTATGGA",6,116.52,10.29,-0.48,0.07,2.81,1.04,0,">1 nonsynonymous","T3A L57F",2
"lib1","SARS-CoV-2","AACAAATGAAGACACT",10,103.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P54S N58S A89E A105L Y123N I138E",6
"lib1","SARS-CoV-2","AACAAATGACAGCGCC",2,7.53,6.4,-4.37,2,1.5,1.24,0.06,">1 nonsynonymous","C6V W106C N118D G146I",4
"lib1","SARS-CoV-2","AACAAATGACTTTTAA",5,31.41,10.06,-0.7,0.15,2.58,1.06,0.01,">1 nonsynonymous","N40Y G83L K128G",3
"lib1","SARS-CoV-2","AACAAATGCAACATAG",8,260.66,9.48,-1.28,0.04,2.84,1.08,0,">1 nonsynonymous","Y119G L188V",2
"lib1","SARS-CoV-2","AACAAATGCCGACTCC",2,16.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51I Y121N",2
"lib1","SARS-CoV-2","AACAAATGCCTAGAAA",2,23.59,10.24,-0.52,0.08,2.93,1,0,">1 nonsynonymous","I2A D34V K56E L122F Q168R",5
"lib1","SARS-CoV-2","AACAAATGGGTATTAA",1,24.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N107S L131W",2
"lib1","SARS-CoV-2","AACAAATTAGACGTTC",1,17.8,6.13,-4.63,0.92,1.5,1.12,0.04,">1 nonsynonymous","K48Y A89S W106V Q144V G166F",5
"lib1","SARS-CoV-2","AACAAATTATAACTAG",2,9.26,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","W23Q C61L G86E Y159P",4
"lib1","SARS-CoV-2","AACAAATTCACTAAAA",5,20.04,10.92,0.15,0.11,3,1.01,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","AACAAATTGTTCAACA",3,68.06,8.65,-2.11,0.23,1.5,1.13,0.02,">1 nonsynonymous","F12V F17L C31S A190S",4
"lib1","SARS-CoV-2","AACAAATTTTTAAACT",3,0.61,NA,NA,NA,NA,NA,NA,"stop","T3R C150* E186H",3
"lib1","SARS-CoV-2","AACAACAAAAGGCCGT",5,60.41,9.49,-1.27,0.19,2.04,1.1,0.01,">1 nonsynonymous","C6A T55K I138P",3
"lib1","SARS-CoV-2","AACAACAAACCATGGA",4,21.32,8.74,-2.03,0.29,1.5,1.19,0.04,">1 nonsynonymous","S69E P149L",2
"lib1","SARS-CoV-2","AACAACAAACTATAAC",2,52.75,9.55,-1.21,0.12,1.85,1.13,0.01,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","AACAACAAAGCGATTA",3,17.54,10.78,0.01,0.07,2.88,1.04,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","AACAACAAAGGAATTG",8,96.69,7.44,-3.32,0.18,1.5,1.19,0.01,">1 nonsynonymous","F47V S113H F160S",3
"lib1","SARS-CoV-2","AACAACAACACCAACA",2,36.92,10.77,0.01,0.09,2.97,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AACAACAACACGTGGA",8,46.83,10.16,-0.6,0.07,2.66,1.05,0,">1 nonsynonymous","A42L D98H A105W",3
"lib1","SARS-CoV-2","AACAACAACTAAACAT",3,47.19,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","Y121N Y159T",2
"lib1","SARS-CoV-2","AACAACAAGAAAATAT",5,30.99,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","T15N K56V A81S F99D F134N",5
"lib1","SARS-CoV-2","AACAACAAGAAATACC",6,86.79,6.02,-4.74,0.87,1.5,1.19,0.01,">1 nonsynonymous","C31F F134S G172P A190S",4
"lib1","SARS-CoV-2","AACAACAATCGCAAAG",4,11.2,8.64,-2.13,0.32,1.81,1.07,0.04,">1 nonsynonymous","N4L N58S N118L",3
"lib1","SARS-CoV-2","AACAACAATCGCCAAG",1,25.15,6.24,-4.52,0.68,1.5,1.28,0.03,">1 nonsynonymous","S36N P54L D137L",3
"lib1","SARS-CoV-2","AACAACAATGGGAACA",4,22.56,NA,NA,NA,NA,NA,NA,"stop","F70* V153Y S184W",3
"lib1","SARS-CoV-2","AACAACAATTTGCCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","P7R C61R D137* S184V",4
"lib1","SARS-CoV-2","AACAACACAAGATAAA",3,34.72,10.08,-0.69,0.1,2.5,1.04,0,">1 nonsynonymous","V77K P197A",2
"lib1","SARS-CoV-2","AACAACACAGTTCGTT",3,106.53,10.32,-0.44,0.03,2.9,1.02,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AACAACACATGACGGA",4,28.87,8.49,-2.27,0.05,2.79,1.14,0,">1 nonsynonymous","S43L K87E Y119T",3
"lib1","SARS-CoV-2","AACAACACCAAGGTAT",1,0.54,NA,NA,NA,NA,NA,NA,"stop","S41Y I88* W106E G116R",4
"lib1","SARS-CoV-2","AACAACACTATCAAGT",4,50.67,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19T F70S T85E Y165T",4
"lib1","SARS-CoV-2","AACAACACTTGCCATG",4,3.41,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","AACAACAGAACATAAA",2,102.36,6,-4.76,0.97,1.5,1.15,0.02,">1 nonsynonymous","R25G L38F F70S A81T",4
"lib1","SARS-CoV-2","AACAACAGTCTGTACA",1,14.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35G K94Q N107T",3
"lib1","SARS-CoV-2","AACAACATAAAAAAGG",2,12.48,10.71,-0.05,0.06,2.94,1,0,">1 nonsynonymous","E10A D90N",2
"lib1","SARS-CoV-2","AACAACATAGTATTTA",4,95.01,9.51,-1.25,0.04,2.9,1.05,0,">1 nonsynonymous","R16F G83R Y119S K198G",4
"lib1","SARS-CoV-2","AACAACATCGAACGAG",1,39.63,10.66,-0.11,0.03,2.86,1.08,0,">1 nonsynonymous","C61H D97G",2
"lib1","SARS-CoV-2","AACAACATTAAATTAT",4,60.23,6.01,-4.76,0.93,1.5,1.25,0.02,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","AACAACATTTTACCGT",5,59.16,9.22,-1.54,0.17,1.7,1.13,0.01,">1 nonsynonymous","L38I A89R",2
"lib1","SARS-CoV-2","AACAACCAACAAACTG",1,36.97,10.65,-0.11,0.06,2.84,1.08,0,">1 nonsynonymous","N1P S19P",2
"lib1","SARS-CoV-2","AACAACCAGGACCACG",4,20.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47R N92T Y119G R136S Y143I",5
"lib1","SARS-CoV-2","AACAACCATTTCCTTC",2,1.51,NA,NA,NA,NA,NA,NA,"stop","D97H L187*",2
"lib1","SARS-CoV-2","AACAACCCAGACCAGG",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V G86M T100S",3
"lib1","SARS-CoV-2","AACAACCCATTAATAA",4,117.69,10.68,-0.08,0.05,2.87,1.09,0,">1 nonsynonymous","L5S T201C",2
"lib1","SARS-CoV-2","AACAACCCCAACCAGG",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V L162W H189P",3
"lib1","SARS-CoV-2","AACAACCCGAACAGTT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","AACAACCCGTGACAAA",6,70.87,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","R16M S41H F62C A81P R124A",5
"lib1","SARS-CoV-2","AACAACCCTACACCAG",6,77.52,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","K56W L95C G146F P177L",4
"lib1","SARS-CoV-2","AACAACCCTTAAGTCC",2,22.93,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","S41P Y121M R136G",3
"lib1","SARS-CoV-2","AACAACCGATTTAATC",5,1.74,NA,NA,NA,NA,NA,NA,"stop","D98S N110S V153*",3
"lib1","SARS-CoV-2","AACAACCGTTCCAAGC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","N92Y V103L N130* N157G",4
"lib1","SARS-CoV-2","AACAACCTCACCATAG",12,215.52,10.27,-0.49,0.03,2.87,1.05,0,">1 nonsynonymous","D90M F160D",2
"lib1","SARS-CoV-2","AACAACCTTACAATGA",2,49.38,9.99,-0.78,0.11,2.3,1.12,0,">1 nonsynonymous","T15P G51S K56R",3
"lib1","SARS-CoV-2","AACAACCTTTGATAAA",3,32.25,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","W23L I104V G166R",3
"lib1","SARS-CoV-2","AACAACGCAACGAAAA",5,49.66,10.32,-0.45,0.06,2.92,1.02,0,">1 nonsynonymous","D98S T170Q",2
"lib1","SARS-CoV-2","AACAACGCCTATAAAT",1,10.35,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49R I104N Y121H T140L G196R",5
"lib1","SARS-CoV-2","AACAACGCCTTGACGC",1,14.77,8.25,-2.51,0.13,2.72,1,0.01,">1 nonsynonymous","G83Y E141S N157L",3
"lib1","SARS-CoV-2","AACAACGGACCTAACA",1,40.09,10.72,-0.05,0.19,2.62,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACAACGGGGTCTCTA",4,79.64,8.02,-2.75,0.19,1.71,1.11,0.01,">1 nonsynonymous","I28G Y66R F156S",3
"lib1","SARS-CoV-2","AACAACGTCATAAGTG",2,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I G101H Y143C",3
"lib1","SARS-CoV-2","AACAACGTTATTGGAC",1,16.28,10.39,-0.37,0.06,2.95,1.03,0,">1 nonsynonymous","N64C P149L F160S A192K",4
"lib1","SARS-CoV-2","AACAACTACAAATATG",8,156.24,9.65,-1.11,0.1,1.82,1.11,0,">1 nonsynonymous","V11I G51Y L122S A145S H189W K198M",6
"lib1","SARS-CoV-2","AACAACTACTAAATAG",3,46.4,10.22,-0.54,0.06,2.85,1,0,">1 nonsynonymous","S41P K48S",2
"lib1","SARS-CoV-2","AACAACTACTAGACGC",2,37.06,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","L60S G86S G152H T170S",4
"lib1","SARS-CoV-2","AACAACTATAAGAGAA",3,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40P",1
"lib1","SARS-CoV-2","AACAACTCAAACCACT",5,24.61,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V11H D98M N130A I142F G152F C158V",6
"lib1","SARS-CoV-2","AACAACTCGTACGCTA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","Y91* N107M I142*",3
"lib1","SARS-CoV-2","AACAACTGACATAGGC",5,30.43,10.67,-0.1,0.09,2.84,1.1,0,"1 nonsynonymous","A18E",1
"lib1","SARS-CoV-2","AACAACTGGCACGGTT",6,92.91,10.74,-0.03,0.04,2.89,1.05,0,">1 nonsynonymous","I104Y P149S",2
"lib1","SARS-CoV-2","AACAACTGGCTCCTTA",7,81.46,10.43,-0.33,0.05,2.87,1.01,0,">1 nonsynonymous","N1Y K56L A192M",3
"lib1","SARS-CoV-2","AACAACTGGTATAAAA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P A14T N107R F134S",4
"lib1","SARS-CoV-2","AACAACTGGTGTGAGT",3,34.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G101I N120V R127Q G172R",4
"lib1","SARS-CoV-2","AACAACTGTAGCGCAA",5,60.22,9.25,-1.51,0.06,2.86,1.09,0,">1 nonsynonymous","T55S Y119N G152F",3
"lib1","SARS-CoV-2","AACAACTGTGTAAGAT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","P7G V37G F44V L95* Y165L",5
"lib1","SARS-CoV-2","AACAACTTAAAGCACA",3,72.34,10.61,-0.16,0.05,2.9,1.11,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","AACAACTTATATAACA",2,9.29,9.63,-1.13,0.3,2.68,1.34,0.02,">1 nonsynonymous","C61S A145K",2
"lib1","SARS-CoV-2","AACAACTTGAAGATTC",4,82.88,6,-4.76,2,2.89,1.19,0,">1 nonsynonymous","L38I D97G C158S",3
"lib1","SARS-CoV-2","AACAACTTGATTTCCG",1,33.31,9.6,-1.16,0.13,2.32,1.07,0.01,">1 nonsynonymous","E10V V11F A33S I142L",4
"lib1","SARS-CoV-2","AACAAGAAACAAGTTT",6,63.57,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S139V F167P K198G",3
"lib1","SARS-CoV-2","AACAAGAAATAGGGTC",4,20.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82K D90C",2
"lib1","SARS-CoV-2","AACAAGAAATATTTTT",6,19.62,6.63,-4.14,0.5,1.5,1.19,0.03,">1 nonsynonymous","T15A C49A D90A G146R F167S V173G",6
"lib1","SARS-CoV-2","AACAAGAACCGCACTG",4,27.66,8.72,-2.04,0.14,1.77,1.1,0.01,">1 nonsynonymous","A105T R136E",2
"lib1","SARS-CoV-2","AACAAGAATAATAAAG",4,98.31,10.78,0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAGACATATTCAA",2,81.5,10.64,-0.13,0.05,2.88,1,0,">1 nonsynonymous","N4R P96S",2
"lib1","SARS-CoV-2","AACAAGACCCCCCTGT",3,42.95,10.83,0.07,0.09,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAGACTGACTCAC",2,94.6,9.16,-1.61,0.08,2.71,1.1,0,">1 nonsynonymous","K87G N107P K199T",3
"lib1","SARS-CoV-2","AACAAGACTGGTGTGG",6,39.91,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","E10R S45D P133S C158F V173A",5
"lib1","SARS-CoV-2","AACAAGAGAACGGTTC",2,8.15,NA,NA,NA,NA,NA,NA,"stop","L57* A89Y L95M Q144T T148S F167A",6
"lib1","SARS-CoV-2","AACAAGAGAAGGCGAA",2,23.99,10.47,-0.29,0.06,2.88,1.02,0,">1 nonsynonymous","E186S H189Y",2
"lib1","SARS-CoV-2","AACAAGAGAATCCACG",6,43.76,10.82,0.05,0.1,2.8,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","AACAAGAGGACATTAG",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K K94H D112R Y123M R136G E154T",6
"lib1","SARS-CoV-2","AACAAGAGGACCTCAC",1,44.53,10.31,-0.45,0.04,2.96,1,0,"1 nonsynonymous","L57A",1
"lib1","SARS-CoV-2","AACAAGATAAATAGGA",2,20.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V37R A89E G152Y F167I",4
"lib1","SARS-CoV-2","AACAAGATAAATCAGT",5,109.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L60D L122M N151E F167A Q176L",5
"lib1","SARS-CoV-2","AACAAGATAACTGCAG",1,6.76,8.86,-1.9,0.35,1.68,1.22,0.06,">1 nonsynonymous","F8L N40Y K56G R127G",4
"lib1","SARS-CoV-2","AACAAGATAAGCTATG",2,8.2,6.61,-4.16,0.89,1.5,1.27,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","AACAAGATATCTTAAG",4,5.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S T85N D98H I104Q N130Y F185E",6
"lib1","SARS-CoV-2","AACAAGATATGTAAGG",6,110.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S S139C V173S",3
"lib1","SARS-CoV-2","AACAAGATGGCGTATT",2,36.03,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","P7E V71R K94T N120M",4
"lib1","SARS-CoV-2","AACAAGATGTCCAATG",5,21.77,10.11,-0.65,0.11,2.07,1,0.01,">1 nonsynonymous","T3V E10F S184Y K199S",4
"lib1","SARS-CoV-2","AACAAGCAAAACGAAA",4,62.5,10.48,-0.29,0.07,2.91,1.05,0,">1 nonsynonymous","G51R L60F",2
"lib1","SARS-CoV-2","AACAAGCAACAAAAAT",3,32.6,10.35,-0.41,0.04,2.88,1.02,0,">1 nonsynonymous","G152L Q163L",2
"lib1","SARS-CoV-2","AACAAGCAAGCCAATG",5,33.85,6.12,-4.64,0.78,1.5,1.17,0.02,">1 nonsynonymous","C102Y V153L Q168K",3
"lib1","SARS-CoV-2","AACAAGCAAGGCCAGC",10,72.84,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K56T V77K R136L",3
"lib1","SARS-CoV-2","AACAAGCAATCTTCAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","P82* S108D",2
"lib1","SARS-CoV-2","AACAAGCAATGTGGCG",2,20.23,10.68,-0.08,0.09,2.86,1.08,0.01,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","AACAAGCATTAGAGAC",3,18,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R25D G101S N118H A145L",4
"lib1","SARS-CoV-2","AACAAGCCAACTTCAA",5,114.86,10.76,-0.01,0.05,2.92,1.05,0,">1 nonsynonymous","V71I P197N",2
"lib1","SARS-CoV-2","AACAAGCCCACCCTCC",1,392.83,9.93,-0.84,0.06,2.13,1.03,0,">1 nonsynonymous","T15V R136I",2
"lib1","SARS-CoV-2","AACAAGCGCCCAAAAT",12,83,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9M P96Q D137V",3
"lib1","SARS-CoV-2","AACAAGCTCTACAGCT",6,90.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L122T R136V S147N R179P",4
"lib1","SARS-CoV-2","AACAAGCTTCACCTTC",4,77.26,8.96,-1.81,0.06,2.78,1.09,0,">1 nonsynonymous","N1V K56S N157A T201A",4
"lib1","SARS-CoV-2","AACAAGGAAACTATCG",2,29.45,10.39,-0.38,0.05,2.92,1.06,0,">1 nonsynonymous","N120F P149H",2
"lib1","SARS-CoV-2","AACAAGGAAACTTTAT",11,1.81,NA,NA,NA,NA,NA,NA,"stop","L188*",1
"lib1","SARS-CoV-2","AACAAGGAACATCCAA",3,30.4,9.07,-1.69,0.12,2.87,1.09,0.01,">1 nonsynonymous","C61L G117T",2
"lib1","SARS-CoV-2","AACAAGGAATACTCAA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","P54T Y121D P149A L162*",4
"lib1","SARS-CoV-2","AACAAGGAGAAATCAT",1,26.68,10.29,-0.47,0.1,2.88,1,0.01,">1 nonsynonymous","T15V K114T",2
"lib1","SARS-CoV-2","AACAAGGATGGATTCT",1,21,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K56S F99H V115R G152P",4
"lib1","SARS-CoV-2","AACAAGGATGTTATGA",2,51.55,10.84,0.08,0.07,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAGGATTACAATC",5,76.02,9.95,-0.81,0.1,2.48,1,0,">1 nonsynonymous","C6F E141F T201L",3
"lib1","SARS-CoV-2","AACAAGGCAGATAACA",5,0.85,NA,NA,NA,NA,NA,NA,"stop","R73* Q84V E141A",3
"lib1","SARS-CoV-2","AACAAGGCCCGTAGAA",10,181.65,10.32,-0.45,0.03,2.82,1.03,0,">1 nonsynonymous","P7G D98A",2
"lib1","SARS-CoV-2","AACAAGGCGATAATAG",1,51.98,6,-4.76,1.14,1.5,1.16,0.01,">1 nonsynonymous","F44C F167T",2
"lib1","SARS-CoV-2","AACAAGGCTTAAGTAT",5,121.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4G A33K A42G N107T Y119V Y165D",6
"lib1","SARS-CoV-2","AACAAGGGATGTTAGC",7,100.28,7.96,-2.81,0.25,1.51,1.12,0.02,">1 nonsynonymous","S41L P133G N171R",3
"lib1","SARS-CoV-2","AACAAGGGGCCTATTT",1,55.35,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","T170W G172V T201N",3
"lib1","SARS-CoV-2","AACAAGGGGTCAGAAC",3,20.03,7.58,-3.19,0.33,1.5,1.01,0.04,">1 nonsynonymous","N24Y D34C E141L S184K",4
"lib1","SARS-CoV-2","AACAAGGTAGGGAAAG",8,73.18,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G51S G101V",2
"lib1","SARS-CoV-2","AACAAGGTAGTGCTAC",3,54.47,10.17,-0.59,0.09,2.6,1.07,0.01,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","AACAAGGTCGCGACTT",4,20.1,6.18,-4.58,1.05,1.5,1.29,0.04,"1 nonsynonymous","V180S",1
"lib1","SARS-CoV-2","AACAAGGTGAGTCATT",4,85.37,10.41,-0.35,0.06,2.87,1.02,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","AACAAGGTTTACTAAA",1,19.96,10.63,-0.14,0.06,2.92,1.07,0,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","AACAAGTAAGTAGCAA",2,31.34,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L57K L95A Q168L",3
"lib1","SARS-CoV-2","AACAAGTAGTGACCGT",2,5.91,6.36,-4.41,2,1.5,1.5,0.06,">1 nonsynonymous","V52H P82V T201A",3
"lib1","SARS-CoV-2","AACAAGTATAATAAAA",1,20.53,10.63,-0.14,0.1,2.83,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAAGTATCGAAATT",1,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V S43M N64I Y123F E135K",5
"lib1","SARS-CoV-2","AACAAGTCAGGATTGG",5,0.42,NA,NA,NA,NA,NA,NA,"stop","D75A T85* D90V",3
"lib1","SARS-CoV-2","AACAAGTCTTTATATG",4,88.66,6.04,-4.73,0.77,1.5,1.17,0.01,">1 nonsynonymous","G9W Y91K G101A W106V G152L V181M H189F",7
"lib1","SARS-CoV-2","AACAAGTTAACCAGGG",4,1.01,NA,NA,NA,NA,NA,NA,"stop","R27K A33G L57E G74M D97* V115S S139T",7
"lib1","SARS-CoV-2","AACAAGTTATGTTACA",2,57.42,10.19,-0.57,0.11,2.51,1.07,0.01,"1 nonsynonymous","C49F",1
"lib1","SARS-CoV-2","AACAAGTTCAAGACGG",9,199.38,10.63,-0.13,0.03,2.91,1.03,0,">1 nonsynonymous","N4S T140Y",2
"lib1","SARS-CoV-2","AACAAGTTTGCAATAC",4,103.72,6,-4.76,2,2.14,1.2,0.01,">1 nonsynonymous","F12L Y39D L57A Y66F Q84N D90K Y178I",7
"lib1","SARS-CoV-2","AACAATAAAATCAGAC",3,36.48,10.75,-0.01,0.1,2.93,1,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","AACAATAAACTAAGAT",4,41.45,7.3,-3.47,0.25,1.5,1.08,0.02,">1 nonsynonymous","S43C N58Y I142V G155I",4
"lib1","SARS-CoV-2","AACAATAAAGTGGCAA",5,890.21,7.84,-2.92,0.13,1.5,1.1,0.01,">1 nonsynonymous","G116W K128M F134I T140H",4
"lib1","SARS-CoV-2","AACAATAACTTTAAAA",1,25.13,6.41,-4.35,0.54,1.53,1.14,0.02,">1 nonsynonymous","L60C R124N",2
"lib1","SARS-CoV-2","AACAATAAGACATTTG",10,156.82,9.33,-1.44,0.09,2.05,1.1,0,">1 nonsynonymous","A22E S29K S43T N107S T148H",5
"lib1","SARS-CoV-2","AACAATAATAAGCCTT",2,31.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3R G9L Y35S A42G N92L",5
"lib1","SARS-CoV-2","AACAATAATACGTGGA",1,25.25,10.88,0.12,0.07,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAATAATCTTATTC",3,57.48,7.59,-3.17,0.16,1.63,1.06,0.01,">1 nonsynonymous","I142F N157C",2
"lib1","SARS-CoV-2","AACAATACAAACAGGG",1,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","AACAATACATTTCATG",3,47.13,10.74,-0.02,0.06,2.96,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AACAATACCCCATCTT",4,1.6,NA,NA,NA,NA,NA,NA,"stop","N1S D90F Y119* K132L C158V",5
"lib1","SARS-CoV-2","AACAATACCTAGGCAA",3,28.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10R G86T W106M Y159W G166P",5
"lib1","SARS-CoV-2","AACAATACGAGATAAA",7,79.09,6.22,-4.55,0.82,1.5,1.15,0.03,">1 nonsynonymous","R127C N157W",2
"lib1","SARS-CoV-2","AACAATACGCACACAC",6,70.39,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N24R R124P",2
"lib1","SARS-CoV-2","AACAATACGTCGGTAC",11,2.78,NA,NA,NA,NA,NA,NA,"stop","F12C W23L C61* W106* F134N",5
"lib1","SARS-CoV-2","AACAATACTAAACTAA",3,38.3,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A14L P161Y",2
"lib1","SARS-CoV-2","AACAATACTCACGTGG",1,15.64,10.35,-0.41,0.06,2.89,1,0,">1 nonsynonymous","D97P K132I N171S",3
"lib1","SARS-CoV-2","AACAATACTCTTTACT",1,40.54,10.71,-0.05,0.12,2.64,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAATAGAGATCCAC",1,22.25,6.02,-4.74,0.87,1.5,1.12,0.02,">1 nonsynonymous","V20K I80N",2
"lib1","SARS-CoV-2","AACAATAGAGGCTAAA",8,89.71,10.43,-0.33,0.03,2.9,1.03,0,">1 nonsynonymous","Q84G G146H",2
"lib1","SARS-CoV-2","AACAATAGCATTGTGA",3,19.99,8.6,-2.16,0.08,2.82,1.05,0.01,">1 nonsynonymous","G9K Y143L F156Q",3
"lib1","SARS-CoV-2","AACAATAGGAAAGCCC",1,24.7,10.2,-0.56,0.11,2.56,1,0.01,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","AACAATAGTATGGCTG",4,61.21,8.8,-1.96,0.08,2.92,1.01,0,"1 nonsynonymous","N171R",1
"lib1","SARS-CoV-2","AACAATATAAAAGGGC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","I2* G9R R73* E135I F156T",5
"lib1","SARS-CoV-2","AACAATATAAGAAACA",1,23.29,9.83,-0.93,0.09,2.02,1.06,0,">1 nonsynonymous","E10G Y66R",2
"lib1","SARS-CoV-2","AACAATATAAGATAAG",7,61.11,9.01,-1.75,0.08,2.82,1.13,0,">1 nonsynonymous","L60N N157E Y175W",3
"lib1","SARS-CoV-2","AACAATATAATGTCAG",2,54.49,8.3,-2.47,0.16,2.28,1.16,0.01,">1 nonsynonymous","Y175L L188V",2
"lib1","SARS-CoV-2","AACAATATACCCGGTT",6,93.5,6.19,-4.57,0.49,1.5,1.14,0.01,">1 nonsynonymous","L5R F17S S29K T46E C61H F134Q",6
"lib1","SARS-CoV-2","AACAATATAGCCCAGA",1,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","AACAATATATAAAAAG",2,6.97,6,-4.76,2,2.01,1.24,0.03,">1 nonsynonymous","P7T C158L",2
"lib1","SARS-CoV-2","AACAATATGAGGTTTC",2,44.33,10.77,0.01,0.08,2.91,1.05,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","AACAATCAAAATACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T I80K T100R T148V",4
"lib1","SARS-CoV-2","AACAATCACTCATTCA",8,49.76,6.97,-3.79,0.39,1.5,1.13,0.03,">1 nonsynonymous","G9L A18R P82W L122E",4
"lib1","SARS-CoV-2","AACAATCATCTGAAAA",1,77.86,6,-4.76,1.82,1.5,1.17,0.01,">1 nonsynonymous","L125P C158I",2
"lib1","SARS-CoV-2","AACAATCCAAAGATGC",1,1.18,NA,NA,NA,NA,NA,NA,"stop","K56S G117D D137*",3
"lib1","SARS-CoV-2","AACAATCCACAAACAT",8,203.45,10.77,0.01,0.06,2.88,1.06,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","AACAATCCCATGGTTC",9,6.09,NA,NA,NA,NA,NA,NA,"stop","K87* K94S",2
"lib1","SARS-CoV-2","AACAATCCCTTGTTAT",10,120.1,9.37,-1.4,0.2,1.51,1.12,0.01,">1 nonsynonymous","E10F E135Y",2
"lib1","SARS-CoV-2","AACAATCCGAAAATGT",4,16.02,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","L95T Y123D",2
"lib1","SARS-CoV-2","AACAATCCTAATACCT",2,16.8,10.13,-0.63,0.08,2.99,1,0,">1 nonsynonymous","T85S F156S",2
"lib1","SARS-CoV-2","AACAATCCTCCGTGAA",3,12.01,6.14,-4.63,2,3,1.39,0.02,">1 nonsynonymous","L5G F12Q C49H G86W P96L I104Q",6
"lib1","SARS-CoV-2","AACAATCGAATTGTCT",1,15.8,6.04,-4.72,1,1.5,1.15,0.04,">1 nonsynonymous","R25A K132H S139N",3
"lib1","SARS-CoV-2","AACAATCGCATTGACT",1,16.95,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","P7L C31V S36C S43T C49Y K56N N64A K87M L122M Q163L",10
"lib1","SARS-CoV-2","AACAATCGTTTACCAG",2,9.14,8.31,-2.45,0.28,2.12,1.15,0.02,">1 nonsynonymous","N107S N120T E135G",3
"lib1","SARS-CoV-2","AACAATCTAAAGCAAA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S G146V Y165S",3
"lib1","SARS-CoV-2","AACAATCTGTGAAATA",3,13.74,6.5,-4.26,0.21,1.5,1.06,0.01,">1 nonsynonymous","V37I K94M L95P",3
"lib1","SARS-CoV-2","AACAATCTTAGACTGT",3,38.06,10.75,-0.01,0.1,2.81,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAATGAAACCCCTT",2,25.41,6.26,-4.51,0.47,1.5,1.23,0.01,">1 nonsynonymous","N64K A81R Y91W E141W P149S",5
"lib1","SARS-CoV-2","AACAATGAAGAGTATG",3,59.48,9.38,-1.39,0.09,2.59,1.14,0,">1 nonsynonymous","K48V N120L G155N",3
"lib1","SARS-CoV-2","AACAATGACGGCACAC",5,17.12,8.98,-1.79,0.31,1.5,1.07,0.04,">1 nonsynonymous","C102V N120I S129F",3
"lib1","SARS-CoV-2","AACAATGAGCCTACGA",3,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W I138M",2
"lib1","SARS-CoV-2","AACAATGAGTGCCCTT",2,139.2,10.81,0.04,0.07,2.89,1.08,0,"1 nonsynonymous","N130K",1
"lib1","SARS-CoV-2","AACAATGCCTGTGGTA",9,1.16,NA,NA,NA,NA,NA,NA,"stop","T46K F134V E141* L162M",4
"lib1","SARS-CoV-2","AACAATGGAGATGCTG",1,21.92,10.81,0.04,0.06,2.84,1.09,0,"1 nonsynonymous","N130K",1
"lib1","SARS-CoV-2","AACAATGGCAACGAAG",1,6.23,10.33,-0.43,0.13,2.84,1.17,0,"1 nonsynonymous","D75E",1
"lib1","SARS-CoV-2","AACAATGGGGAGGACG",2,72.88,10.7,-0.06,0.05,2.91,1.05,0,"1 nonsynonymous","K26A",1
"lib1","SARS-CoV-2","AACAATGTGGCCCAAA",2,20.9,7.43,-3.34,0.26,1.5,1.04,0.02,">1 nonsynonymous","F12R E141Y L162M S164F A190S",5
"lib1","SARS-CoV-2","AACAATGTTGAACTTA",9,106.26,6,-4.76,1.51,1.5,1.15,0.01,">1 nonsynonymous","K26S G74K N130G P161Q",4
"lib1","SARS-CoV-2","AACAATGTTGTGACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9N N107S N130*",3
"lib1","SARS-CoV-2","AACAATGTTTAGAAAG",4,45.3,9.26,-1.51,0.14,1.76,1.11,0.01,">1 nonsynonymous","F17A N24Y",2
"lib1","SARS-CoV-2","AACAATTAAATAATTC",2,4.82,NA,NA,NA,NA,NA,NA,"stop","P7R G51R Y121F Y159*",4
"lib1","SARS-CoV-2","AACAATTAATAAAGAT",1,16.38,6.11,-4.65,0.53,1.5,1.09,0.01,">1 nonsynonymous","S45Y I72D",2
"lib1","SARS-CoV-2","AACAATTAATGTTATA",2,64.83,10.49,-0.28,0.04,2.92,1.02,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","AACAATTAATTGAATC",1,14.2,9.74,-1.02,0.06,2.87,1.01,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","AACAATTACATTGATA",5,68.58,9.69,-1.08,0.17,1.77,1.08,0.01,">1 nonsynonymous","D34G T85W",2
"lib1","SARS-CoV-2","AACAATTACTAATGAC",4,29.92,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G51E Y121P Q144H",3
"lib1","SARS-CoV-2","AACAATTAGATACATA",3,17.44,9.93,-0.84,0.13,1.92,1.07,0.01,">1 nonsynonymous","K94F L122K P149S F160C",4
"lib1","SARS-CoV-2","AACAATTAGTGACAGA",1,49.18,9.4,-1.36,0.07,2.84,1.07,0,">1 nonsynonymous","T148G N171L A192G",3
"lib1","SARS-CoV-2","AACAATTAGTTAATTA",1,6.55,9.81,-0.96,0.32,2.61,1.03,0.05,">1 nonsynonymous","D59M G152P",2
"lib1","SARS-CoV-2","AACAATTCACCAATCG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","W23Q V65* D90Y N130D",4
"lib1","SARS-CoV-2","AACAATTCACTATAAA",6,1.55,NA,NA,NA,NA,NA,NA,"stop","Y91* Y123S Y143S S164D T201E",5
"lib1","SARS-CoV-2","AACAATTCCTAGCCCA",2,13.96,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","A105K Y121R N157V",3
"lib1","SARS-CoV-2","AACAATTCTACAGAGT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T D59I S69G D90G",4
"lib1","SARS-CoV-2","AACAATTCTATAAGCC",3,26,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A89I N110T N120L L162G",4
"lib1","SARS-CoV-2","AACAATTGATTGAATC",1,27.38,NA,NA,NA,NA,NA,NA,"stop","A22* G152Y F160Y Y165D",4
"lib1","SARS-CoV-2","AACAATTGCAAATAAA",5,118.36,10.22,-0.55,0.05,2.74,1.03,0,">1 nonsynonymous","L5C L57M N64Y",3
"lib1","SARS-CoV-2","AACAATTTACCTTATT",2,34.63,10.82,0.06,0.07,2.93,1.02,0,"1 nonsynonymous","N110M",1
"lib1","SARS-CoV-2","AACAATTTAGAAGGAC",1,36.7,10.57,-0.2,0.05,2.92,1.02,0,">1 nonsynonymous","N64L S200F",2
"lib1","SARS-CoV-2","AACAATTTAGTGTGTA",11,86.8,9.93,-0.84,0.09,2.07,1.08,0,">1 nonsynonymous","I104H N120V",2
"lib1","SARS-CoV-2","AACAATTTATCCGACA",2,22.44,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","L38S G152M Y159L",3
"lib1","SARS-CoV-2","AACAATTTCATGAAAC",2,29.68,9.97,-0.8,0.07,2.04,1.02,0,">1 nonsynonymous","N4L V37Q F44S S53T",4
"lib1","SARS-CoV-2","AACAATTTCCAACCTA",3,38.93,7.56,-3.2,0.22,1.5,1.04,0.02,">1 nonsynonymous","I28D D98G",2
"lib1","SARS-CoV-2","AACAATTTCCTGAACC",8,3.14,NA,NA,NA,NA,NA,NA,"stop","A81L Y175S E186Y T201*",4
"lib1","SARS-CoV-2","AACACAAAAAGCTCTA",2,13.34,9.94,-0.83,0.1,2.49,1.05,0.01,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","AACACAAAACGTTAAA",1,11.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Y Y178R P197K",3
"lib1","SARS-CoV-2","AACACAAAAGGGATCA",10,68.76,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38R Y50F I88K G101F C150L A192T",6
"lib1","SARS-CoV-2","AACACAAACCTCAGCG",2,37.54,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y123C K128T E135G E141G L162K Q176R",6
"lib1","SARS-CoV-2","AACACAAACTTACAAA",11,185.71,10.56,-0.2,0.04,2.91,1.01,0,">1 nonsynonymous","E10G P149E",2
"lib1","SARS-CoV-2","AACACAAAGCAACCAA",5,0.46,NA,NA,NA,NA,NA,NA,"stop","V77L A81S K128* S184V",4
"lib1","SARS-CoV-2","AACACAAAGCCCATAA",8,105.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L Y119M",2
"lib1","SARS-CoV-2","AACACAAATACTGTAA",2,54.45,10.07,-0.7,0.1,2.17,1,0,">1 nonsynonymous","T63I V180T",2
"lib1","SARS-CoV-2","AACACAAATTATCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56R K87N D97* K114E Y178R",5
"lib1","SARS-CoV-2","AACACAACAGAAGTAA",11,194.33,10.69,-0.07,0.04,2.92,1.05,0,">1 nonsynonymous","Y35I D59V",2
"lib1","SARS-CoV-2","AACACAACAGGAGGAC",6,32.02,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2D A105K G152R Y159N G166L",5
"lib1","SARS-CoV-2","AACACAACAGTTTTAT",18,126.63,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","S29G L60A Y93P W106R C150K",5
"lib1","SARS-CoV-2","AACACAACATAACGAA",5,61.96,10.67,-0.09,0.06,2.85,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACAACATATAACT",5,67.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y93P N120S",2
"lib1","SARS-CoV-2","AACACAACCAATGGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","W23Q D98G K114*",3
"lib1","SARS-CoV-2","AACACAACGAAATGGT",8,97.67,10.77,0,0.06,2.87,1.01,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","AACACAACGCAACCCA",2,18.46,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G51R G83L F167D",3
"lib1","SARS-CoV-2","AACACAACTAAAGAAA",5,105.06,10.65,-0.12,0.05,2.91,1.07,0,">1 nonsynonymous","N40S G83L P197N",3
"lib1","SARS-CoV-2","AACACAACTCCCTTTA",12,270.42,8.94,-1.82,0.05,2.85,1.09,0,">1 nonsynonymous","V32R Y119D Q144P",3
"lib1","SARS-CoV-2","AACACAAGCCATAATC",3,30.81,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C31R C61A N107Y",3
"lib1","SARS-CoV-2","AACACAAGCGGACGCA",2,70.09,10.64,-0.13,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACAAGGGGCGTAT",1,5.46,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","A67S G86C D98S G174P",4
"lib1","SARS-CoV-2","AACACAAGTATAAAGA",2,67.77,10.57,-0.19,0.06,2.85,1.08,0,"1 nonsynonymous","F160E",1
"lib1","SARS-CoV-2","AACACAAGTCACTAAA",2,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R Y143L V153R F160Y V181Y",5
"lib1","SARS-CoV-2","AACACAATATTAACAC",1,22.05,10.61,-0.15,0.09,2.71,1.21,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","AACACAATATTTCCAA",1,29.18,10.5,-0.27,0.09,2.87,1.04,0.01,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","AACACAATCCCCGTAT",11,6.71,NA,NA,NA,NA,NA,NA,"stop","Y35* A89M R136G",3
"lib1","SARS-CoV-2","AACACAATGATATGGT",2,19.64,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","I80W P149H",2
"lib1","SARS-CoV-2","AACACAATGGCATAAG",4,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36C V65R V103P",3
"lib1","SARS-CoV-2","AACACAATGGCCCCCC",4,62.05,9.4,-1.36,0.13,1.7,1.14,0.01,">1 nonsynonymous","L5R Y50I P149M",3
"lib1","SARS-CoV-2","AACACAATGTGGGGCT",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98T P177L",2
"lib1","SARS-CoV-2","AACACAATTAAAATTT",4,95.87,10.71,-0.05,0.04,2.9,1.06,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","AACACAATTCGTATTA",5,1.3,NA,NA,NA,NA,NA,NA,"stop","K87* S129Q E141S G152H Q168M Y175W",6
"lib1","SARS-CoV-2","AACACACAACCAGCAT",1,6.6,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","C6L S43I Q84N Q168L G174E",5
"lib1","SARS-CoV-2","AACACACAAGTATGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45* Q144S",2
"lib1","SARS-CoV-2","AACACACAATAAGAAA",2,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R F44Q S129M G146S V173P",5
"lib1","SARS-CoV-2","AACACACACCTTCTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D N13Q L60R P96Q G172L",5
"lib1","SARS-CoV-2","AACACACACGATCTAT",8,166.71,10.63,-0.13,0.06,2.91,1.04,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","AACACACAGACCAACC",1,21.95,8.43,-2.34,0.17,2.41,1.1,0.01,">1 nonsynonymous","N118Y P169E",2
"lib1","SARS-CoV-2","AACACACCACGGATAT",1,13.92,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D90S F167I",2
"lib1","SARS-CoV-2","AACACACCTGAGGATG",2,42.79,10.56,-0.21,0.07,2.96,1.05,0,">1 nonsynonymous","G9Q C195M",2
"lib1","SARS-CoV-2","AACACACGCACACAAG",1,21.68,6.07,-4.7,1.5,1.5,1.2,0.04,">1 nonsynonymous","S19K A22E A81T N110K C195P",5
"lib1","SARS-CoV-2","AACACACGCTAATAAT",6,45.78,10.61,-0.16,0.06,2.91,1.06,0,">1 nonsynonymous","N1P V11L",2
"lib1","SARS-CoV-2","AACACACTACCACGAG",1,136.88,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S43R Q176P",2
"lib1","SARS-CoV-2","AACACACTACGTGTTC",2,75.35,10.68,-0.08,0.08,2.89,1.07,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","AACACACTATTAAAAA",6,8.67,NA,NA,NA,NA,NA,NA,"stop","I104* S139V P177T",3
"lib1","SARS-CoV-2","AACACACTCCCCACGT",1,55.74,9.22,-1.54,0.09,2.68,1.17,0,">1 nonsynonymous","S45Y Y119K",2
"lib1","SARS-CoV-2","AACACACTTAAAAGAG",4,87.38,9.27,-1.49,0.17,1.79,1.12,0.01,">1 nonsynonymous","C6Y T100Q V153C S200V",4
"lib1","SARS-CoV-2","AACACACTTCAGAATT",2,14.35,8.77,-1.99,0.11,2.86,1.08,0.01,">1 nonsynonymous","E10R Q168L V173E",3
"lib1","SARS-CoV-2","AACACACTTGACACGC",3,91.28,8.8,-1.96,0.17,1.68,1.15,0.01,">1 nonsynonymous","V37R N107P N120Q F134I",4
"lib1","SARS-CoV-2","AACACAGAATAAAGCA",4,96.93,10.29,-0.48,0.07,2.89,1.01,0,">1 nonsynonymous","I2E G83S P149C",3
"lib1","SARS-CoV-2","AACACAGACCAATTAT",6,175.58,10.13,-0.63,0.06,2.48,1.01,0,">1 nonsynonymous","L60A S139L",2
"lib1","SARS-CoV-2","AACACAGAGAAAGGGC",1,64.92,10.7,-0.07,0.06,2.9,1.07,0,">1 nonsynonymous","I2S F62C",2
"lib1","SARS-CoV-2","AACACAGATGAGAACA",6,23.82,9.6,-1.16,0.15,1.77,1.11,0.01,"1 nonsynonymous","D137H",1
"lib1","SARS-CoV-2","AACACAGCATGCAGAA",1,30.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72Y A105T E135C",3
"lib1","SARS-CoV-2","AACACAGCCACATTAT",3,21.62,6.62,-4.14,0.47,1.5,1.16,0.03,">1 nonsynonymous","Y50F C61Y A89N N120L T201P",5
"lib1","SARS-CoV-2","AACACAGGAAGTAATG",15,66.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29C N107I",2
"lib1","SARS-CoV-2","AACACAGGACAAAAAT",2,44.83,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9T G101A",2
"lib1","SARS-CoV-2","AACACAGGAGCTTTTA",9,108.03,9.6,-1.16,0.11,2.36,1.08,0,">1 nonsynonymous","A33V G51E I142F A190S",4
"lib1","SARS-CoV-2","AACACAGGATTAACCT",2,29.31,10.52,-0.24,0.06,2.87,1.04,0,"1 nonsynonymous","D34E",1
"lib1","SARS-CoV-2","AACACAGGGTCTCAAA",14,28.85,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","F62L V103S",2
"lib1","SARS-CoV-2","AACACAGGTATTTGGT",2,868.7,10.74,-0.02,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACAGGTGTAAACC",2,28.19,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I88D R127L",2
"lib1","SARS-CoV-2","AACACAGGTTCAGTAA",1,16.43,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","S43G D112P",2
"lib1","SARS-CoV-2","AACACAGTAAAATAAG",6,116.18,10.12,-0.64,0.05,2.94,1,0,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","AACACAGTATGAACTT",2,7.54,10.69,-0.08,0.06,3,1.01,0,">1 nonsynonymous","C61W S200T",2
"lib1","SARS-CoV-2","AACACAGTTAACAGTT",1,17.91,6,-4.76,1.06,1.5,1.18,0.01,">1 nonsynonymous","C49R K128R",2
"lib1","SARS-CoV-2","AACACATAATTACCAC",3,2.41,NA,NA,NA,NA,NA,NA,"stop","A14F S41*",2
"lib1","SARS-CoV-2","AACACATACAACAAAT",4,27.31,9.47,-1.29,0.15,1.9,1.14,0.01,">1 nonsynonymous","A14M K56W C195F",3
"lib1","SARS-CoV-2","AACACATACAACTTAC",2,21.18,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P82L W106L E135L",3
"lib1","SARS-CoV-2","AACACATAGCAACACT",6,129.1,10.81,0.04,0.06,2.91,1.06,0,">1 nonsynonymous","T63K S147T",2
"lib1","SARS-CoV-2","AACACATATATCAGAG",5,1.95,NA,NA,NA,NA,NA,NA,"stop","L60M W106* I138L F160S",4
"lib1","SARS-CoV-2","AACACATATGTAAAAC",2,5.66,6.01,-4.75,1.58,1.5,1.05,0.01,">1 nonsynonymous","G51F I88L S129D",3
"lib1","SARS-CoV-2","AACACATATTCAAAAT",2,8.26,9.51,-1.26,0.47,1.62,1.31,0.07,">1 nonsynonymous","T3D T63V",2
"lib1","SARS-CoV-2","AACACATCACCCGTAG",2,39.48,10.79,0.03,0.06,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AACACATCCGATCACC",4,10.76,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","F8M G83S S113L",3
"lib1","SARS-CoV-2","AACACATCTGTTATCC",1,21.31,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","R25L F160L L162V T170E",4
"lib1","SARS-CoV-2","AACACATGCAACAACA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","G146K F160*",2
"lib1","SARS-CoV-2","AACACATGCGACGAAT",8,168,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36P N64S R127E",3
"lib1","SARS-CoV-2","AACACATGGATGACGT",2,7.23,8.51,-2.26,0.32,1.67,1.14,0.08,">1 nonsynonymous","C6G S43L A105I",3
"lib1","SARS-CoV-2","AACACATTAACCTATA",7,40.02,10.89,0.12,0.07,2.91,1.06,0,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","AACACATTATTACAGC",4,0.63,NA,NA,NA,NA,NA,NA,"stop","C31Q G86* Y123F T170D",4
"lib1","SARS-CoV-2","AACACATTATTGTAGA",2,24.92,9.87,-0.89,0.13,2.59,1.13,0,">1 nonsynonymous","I2R P133F",2
"lib1","SARS-CoV-2","AACACATTGATAGCCT",3,35.6,10.76,-0.01,0.06,2.88,1.07,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AACACATTGCCGCCAG",5,62.85,6.94,-3.83,0.27,1.5,1.17,0.01,">1 nonsynonymous","R16P S113L",2
"lib1","SARS-CoV-2","AACACATTGCTACACA",5,81.27,10.8,0.04,0.07,2.94,1,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","AACACATTTATTTAAC",7,46.78,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N1L C150R P169L",3
"lib1","SARS-CoV-2","AACACATTTTAATAGA",6,32.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C49F T55M T63I W106K G166L",5
"lib1","SARS-CoV-2","AACACATTTTATTTCA",1,4.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","AACACCAAACCGATAT",9,8.47,NA,NA,NA,NA,NA,NA,"stop","N107* P149E Y175S",3
"lib1","SARS-CoV-2","AACACCAAATGCCCAC",3,42.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35T N64F F99S G152L Q163S Q176L",6
"lib1","SARS-CoV-2","AACACCAACGAGCAAT",4,57.26,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I28K D97R N107I Y175Q T201P",5
"lib1","SARS-CoV-2","AACACCAAGACCGAGA",1,15.32,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T46I L60V A89P E135R R179C",5
"lib1","SARS-CoV-2","AACACCAAGTAATAGT",1,56.22,8.12,-2.64,0.28,2.07,1.29,0.03,">1 nonsynonymous","E10P S41Y I142D",3
"lib1","SARS-CoV-2","AACACCACCTCACCGG",17,174.84,8.49,-2.28,0.11,2.81,1.07,0.01,">1 nonsynonymous","N40E G166E",2
"lib1","SARS-CoV-2","AACACCACGGTTATTT",6,31.36,6,-4.76,1.83,1.5,1.25,0.01,">1 nonsynonymous","A14F V77F F99V E141N P149Q G174R",6
"lib1","SARS-CoV-2","AACACCACTCATGACG",1,7.2,6,-4.76,1.39,3,1.05,0.02,">1 nonsynonymous","F12D Q84K C158K F167A",4
"lib1","SARS-CoV-2","AACACCACTCCCGTTA",4,63.4,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5V T15N K48I L111R Y159L Y178L",6
"lib1","SARS-CoV-2","AACACCAGAGCGGGAA",2,100.26,10.55,-0.22,0.05,2.9,1.03,0,">1 nonsynonymous","K87I S147F",2
"lib1","SARS-CoV-2","AACACCAGATGTCCAA",1,6.82,9.16,-1.6,0.18,2.84,1.1,0.01,">1 nonsynonymous","S45Q Y121F T170R",3
"lib1","SARS-CoV-2","AACACCAGCTCTGTAC",4,82.68,10.68,-0.09,0.05,2.91,1.03,0,">1 nonsynonymous","G9K S147W",2
"lib1","SARS-CoV-2","AACACCAGTACCGAGG",3,55.63,8.46,-2.3,0.24,1.5,1.06,0.02,">1 nonsynonymous","V65P F160L L188T A192T",4
"lib1","SARS-CoV-2","AACACCATTGTTTTCG",1,20.17,10.73,-0.03,0.07,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACCCAAACGTCCA",2,15.15,7.94,-2.82,0.44,1.5,1.25,0.06,">1 nonsynonymous","K56R N92A N151F",3
"lib1","SARS-CoV-2","AACACCCAGCCAGAGT",6,65.02,10.78,0.01,0.11,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACCCCACGATTAA",5,37.13,8.74,-2.02,0.19,1.84,1.09,0.01,">1 nonsynonymous","C61S S113P",2
"lib1","SARS-CoV-2","AACACCCGCCATACTA",4,5.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3L S19M C61K V181K T201W",5
"lib1","SARS-CoV-2","AACACCCGGGGCTGCG",2,92.02,7.63,-3.13,0.15,1.65,1.16,0.01,"1 nonsynonymous","P177G",1
"lib1","SARS-CoV-2","AACACCCTAAAAGAAC",12,156.29,9.55,-1.21,0.08,2.74,1.09,0,">1 nonsynonymous","N58I K87Q A190C",3
"lib1","SARS-CoV-2","AACACCCTATCAACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35W L131* F160L T201L",4
"lib1","SARS-CoV-2","AACACCCTCTGCACGG",1,31.76,10.6,-0.16,0.1,2.77,1.17,0,">1 nonsynonymous","G155S T201P",2
"lib1","SARS-CoV-2","AACACCGAAAAATTTG",4,90.52,10.78,0.01,0.05,2.89,1.06,0,"1 nonsynonymous","N171I",1
"lib1","SARS-CoV-2","AACACCGAAAACTCCA",1,44.01,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","G86L I138V N157V Y165N",4
"lib1","SARS-CoV-2","AACACCGAAGAAGACT",3,6.53,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","I88G I104N T148N Q168V",4
"lib1","SARS-CoV-2","AACACCGAAGAGGGAT",20,15.37,NA,NA,NA,NA,NA,NA,"stop","V11T N64T Q84* L122E P149T T170V",6
"lib1","SARS-CoV-2","AACACCGATTTATAGA",6,120.65,9.41,-1.36,0.05,2.83,1.11,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","AACACCGGGTAAAGCA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","T15* Y66* E141F V180A",4
"lib1","SARS-CoV-2","AACACCGTATTACCTT",2,2.68,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACACCGTCAACCAGG",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S F185A",2
"lib1","SARS-CoV-2","AACACCTAACGTTTAG",3,18.51,8.8,-1.96,0.19,2.22,1.1,0.01,">1 nonsynonymous","L125F R179K",2
"lib1","SARS-CoV-2","AACACCTACGACTAAA",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R K94Q S129I E135L",4
"lib1","SARS-CoV-2","AACACCTCAATATAAT",13,75.43,7.77,-2.99,0.22,1.5,1.1,0.02,">1 nonsynonymous","D137V G174H",2
"lib1","SARS-CoV-2","AACACCTCAGATATGG",2,7.66,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F12S G172V",2
"lib1","SARS-CoV-2","AACACCTGTACTGATG",1,8.97,10.5,-0.27,0.08,2.94,1.05,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","AACACCTTAAGTCGAC",3,51.44,10.8,0.03,0.06,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AACACCTTGACAGAGA",5,189.22,9.44,-1.33,0.09,2.2,1.09,0,">1 nonsynonymous","P7I D98T G155S K198N",4
"lib1","SARS-CoV-2","AACACCTTGACGGCGG",7,96.56,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y50C Y143L P149S K198P",4
"lib1","SARS-CoV-2","AACACCTTGTAACAGG",1,10.94,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","R73T G86K",2
"lib1","SARS-CoV-2","AACACCTTTAACCCTA",8,106.33,8.46,-2.3,0.13,2.78,1.05,0.01,">1 nonsynonymous","I28L N157Y",2
"lib1","SARS-CoV-2","AACACGAAATTGTACC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","S43H D59V R73* G83D L125R",5
"lib1","SARS-CoV-2","AACACGAACAAATCTG",3,24.18,8.67,-2.1,0.08,2.68,1.08,0,"1 nonsynonymous","S113R",1
"lib1","SARS-CoV-2","AACACGAACAGCTATC",3,11.46,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","E10N N107D L125F S139T G152M",5
"lib1","SARS-CoV-2","AACACGAACGCACCCT",3,78,10.72,-0.04,0.04,2.91,1.05,0,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","AACACGAAGGCGGCAA",3,62.48,9.79,-0.97,0.16,1.75,1.18,0.01,">1 nonsynonymous","Y50C T201L",2
"lib1","SARS-CoV-2","AACACGAAGTAAAATA",2,129.72,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S69L Y119A R127S P177S",4
"lib1","SARS-CoV-2","AACACGAATAATTGAT",4,121.73,10.64,-0.13,0.05,2.89,1.05,0,"1 nonsynonymous","Y121Q",1
"lib1","SARS-CoV-2","AACACGACAAACGATT",2,112.41,10.76,0,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACGACCAGAAGCC",3,26.29,10.79,0.03,0.08,2.98,1,0,">1 nonsynonymous","T3K L60M",2
"lib1","SARS-CoV-2","AACACGACCGCAGGGG",5,204.83,10.45,-0.31,0.04,2.93,1.03,0,"1 nonsynonymous","T85C",1
"lib1","SARS-CoV-2","AACACGACCTCTAGAG",5,77.26,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R73E W106T",2
"lib1","SARS-CoV-2","AACACGACGGCCATAT",7,8.74,9.41,-1.35,0.25,1.5,1,0.03,">1 nonsynonymous","A14L S45I",2
"lib1","SARS-CoV-2","AACACGAGCACATTTT",2,31.02,9.72,-1.04,0.14,2.64,1.1,0.01,">1 nonsynonymous","S41T Q144L",2
"lib1","SARS-CoV-2","AACACGAGCACGTCAA",4,34.43,10.67,-0.09,0.11,2.74,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACACGATCTAAGTGT",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I Q84A P133R",3
"lib1","SARS-CoV-2","AACACGATTTCTGACT",6,32.72,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K56I A81Y R136W",3
"lib1","SARS-CoV-2","AACACGCAATCAAAGG",2,9.74,10.16,-0.6,0.13,2.65,1.04,0.01,">1 nonsynonymous","G9E R16I F44R K56I N107G S139N A145G P191T P197V",9
"lib1","SARS-CoV-2","AACACGCACCTAGGAC",6,89.33,10.3,-0.46,0.06,2.86,1.02,0,">1 nonsynonymous","N4L T15S N151M",3
"lib1","SARS-CoV-2","AACACGCACTATAGAT",1,53.11,10.71,-0.06,0.03,2.87,1.04,0,">1 nonsynonymous","Q144G T201Y",2
"lib1","SARS-CoV-2","AACACGCAGAAATACA",1,46.27,7.96,-2.81,0.19,1.62,1.11,0.01,">1 nonsynonymous","S41C S129F Y143T A192T",4
"lib1","SARS-CoV-2","AACACGCAGGATAGTA",11,143.27,8.29,-2.47,0.18,1.83,1.18,0.01,">1 nonsynonymous","E141R Y165V",2
"lib1","SARS-CoV-2","AACACGCATTTTATTC",5,31.56,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N4F A14S F44Y T46S G86T L95E Y143H Y165L",8
"lib1","SARS-CoV-2","AACACGCCAACTTAGC",2,35.22,10.73,-0.04,0.08,2.9,1.04,0,">1 nonsynonymous","F62Y D98S H189E",3
"lib1","SARS-CoV-2","AACACGCCTAAAGGTT",3,45.99,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","A89L D112K A145V G152Q",4
"lib1","SARS-CoV-2","AACACGCTCATAATAA",2,57.37,10.84,0.07,0.12,2.92,1,0,">1 nonsynonymous","V32Y L60M K128G",3
"lib1","SARS-CoV-2","AACACGGAAAATAACC",5,72.02,9.86,-0.9,0.06,2.26,1.03,0,">1 nonsynonymous","I2S F12Y A192S",3
"lib1","SARS-CoV-2","AACACGGAGCAATTCA",3,82.46,10.65,-0.12,0.06,2.9,1.09,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","AACACGGATCCTTTAG",9,63.77,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N109P Y119S G174Y",3
"lib1","SARS-CoV-2","AACACGGATTCGTACT",1,32.99,9.15,-1.61,0.1,2.74,1.15,0,">1 nonsynonymous","L5E C61V D90N Y119V",4
"lib1","SARS-CoV-2","AACACGGGAGTGATAG",4,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L C61L I104N E141V K198E",5
"lib1","SARS-CoV-2","AACACGGGCCAAAAAA",2,8.3,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","S41R Y91Q G146R",3
"lib1","SARS-CoV-2","AACACGGGCTGTCCCA",7,75.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10A Y21C D137E",3
"lib1","SARS-CoV-2","AACACGGTAAGAAAAA",5,0.91,NA,NA,NA,NA,NA,NA,"stop","F44D G74I P96H W106* F126L K132N G146*",7
"lib1","SARS-CoV-2","AACACGGTACTTTGAT",11,166.15,9.18,-1.59,0.08,2.85,1.1,0,">1 nonsynonymous","K48E T148R Q168L",3
"lib1","SARS-CoV-2","AACACGTCAAAGTGAC",3,45.19,8.44,-2.32,0.16,2.31,1.15,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","AACACGTCAGGGTACG",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R Y50S D90M",3
"lib1","SARS-CoV-2","AACACGTGAGTATCAA",2,39.24,8.61,-2.15,0.14,2.51,1.13,0.01,">1 nonsynonymous","N13D E141L T170L P197L",4
"lib1","SARS-CoV-2","AACACGTTATGCCACA",4,7.2,6.02,-4.75,2,1.5,1.15,0.02,">1 nonsynonymous","A42G C49Y L57P L95V W106R N151K",6
"lib1","SARS-CoV-2","AACACGTTTGTAATGG",2,24.29,10.04,-0.73,0.05,2.89,1.03,0,">1 nonsynonymous","G74H L122A",2
"lib1","SARS-CoV-2","AACACTAAAAAAATAA",3,79.3,10.71,-0.06,0.08,2.92,1.06,0,">1 nonsynonymous","L5Q T201S",2
"lib1","SARS-CoV-2","AACACTAAAAGATGTA",2,7.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F A42S D68L",3
"lib1","SARS-CoV-2","AACACTAAAAGCCTTG",4,16.5,7.24,-3.53,0.18,1.67,1.18,0.01,">1 nonsynonymous","C6G F126L S147Y F160V",4
"lib1","SARS-CoV-2","AACACTAAATAACTAA",3,7.97,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","I80K N130M",2
"lib1","SARS-CoV-2","AACACTAAGCAAATAA",11,136.55,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S19Q L57V A105L",3
"lib1","SARS-CoV-2","AACACTAATGTTCCTA",4,16.11,10.52,-0.25,0.06,2.97,1.02,0,">1 nonsynonymous","Y39M A105S T140N",3
"lib1","SARS-CoV-2","AACACTACAATACTAA",2,7.16,NA,NA,NA,NA,NA,NA,"stop","K114* F167R Y178C",3
"lib1","SARS-CoV-2","AACACTACAGGTCTAG",1,0.3,NA,NA,NA,NA,NA,NA,"stop","N13* V103* P149W",3
"lib1","SARS-CoV-2","AACACTACCCTTTCGC",6,141.36,10.73,-0.04,0.05,2.94,1.03,0,">1 nonsynonymous","N64S K114A",2
"lib1","SARS-CoV-2","AACACTAGAGAACTAG",3,2.99,NA,NA,NA,NA,NA,NA,"stop","G9P A14* N64H Y165I",4
"lib1","SARS-CoV-2","AACACTAGGAGTAACA",1,31.68,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","K114E R124P",2
"lib1","SARS-CoV-2","AACACTATTACGTAGT",6,85.61,10.55,-0.21,0.06,2.93,1.04,0,">1 nonsynonymous","E10S T148V",2
"lib1","SARS-CoV-2","AACACTATTGCACGAT",2,28.54,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","A14L S19M S69D N110E Y123T T201C",6
"lib1","SARS-CoV-2","AACACTCAACTATACG",7,40.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19L Q144P P149Q T170V",4
"lib1","SARS-CoV-2","AACACTCAATATGTAT",3,5.51,6,-4.76,2,1.5,1.05,0.02,">1 nonsynonymous","N24G Q84R K87M N120W G146F",5
"lib1","SARS-CoV-2","AACACTCACAACCTCA",5,78.61,10.8,0.03,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACTCACTTTATCG",5,51.22,8.63,-2.13,0.08,2.71,1.06,0,">1 nonsynonymous","F12L G146E",2
"lib1","SARS-CoV-2","AACACTCATGTAGAGC",10,41.08,6,-4.76,1.3,1.5,1.15,0.01,">1 nonsynonymous","K94E G101R",2
"lib1","SARS-CoV-2","AACACTCCACAAGTCG",2,26.52,9.77,-0.99,0.12,1.83,1.05,0.01,">1 nonsynonymous","C6F F12K K199N",3
"lib1","SARS-CoV-2","AACACTCCTCATATAG",10,121.67,7.64,-3.12,0.26,1.5,1.07,0.02,">1 nonsynonymous","T55I L60S Y121A N151S A192T",5
"lib1","SARS-CoV-2","AACACTCGGGGATTCA",4,38.82,10.68,-0.08,0.11,2.83,1.09,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","AACACTCTACCCTATA",2,39.63,10.4,-0.36,0.06,2.96,1.01,0,"1 nonsynonymous","Y123Q",1
"lib1","SARS-CoV-2","AACACTCTATTATTTG",1,5.66,7.14,-3.63,0.52,1.79,1.17,0.06,">1 nonsynonymous","N40Y Y121L D137A L183M",4
"lib1","SARS-CoV-2","AACACTCTCCTGCAGC",3,87.43,10.61,-0.15,0.04,2.9,1.03,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","AACACTCTGCTGCCCA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52D Y91G D112S",3
"lib1","SARS-CoV-2","AACACTGAAAAGTTTT",5,38.77,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A105E Y123V F185L",3
"lib1","SARS-CoV-2","AACACTGAAAGGCTTA",2,28.45,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G117R R136L Y175M",3
"lib1","SARS-CoV-2","AACACTGAACGACCTA",5,54.26,10.21,-0.56,0.06,2.79,1.05,0,">1 nonsynonymous","N30L C61I N151Q T201L",4
"lib1","SARS-CoV-2","AACACTGAGGACGGAG",10,184.69,6,-4.76,1.15,1.5,1.19,0.01,">1 nonsynonymous","R16I L38H F99T",3
"lib1","SARS-CoV-2","AACACTGATCGACTCA",2,65.04,9.75,-1.02,0.1,2.23,1.12,0,"1 nonsynonymous","A81F",1
"lib1","SARS-CoV-2","AACACTGCAAACAATC",1,19.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V N130K",2
"lib1","SARS-CoV-2","AACACTGCCACCCGAC",3,6.14,6.02,-4.75,1.86,1.5,1.16,0.03,">1 nonsynonymous","A42S K94C D98V G117A S164F F167L",6
"lib1","SARS-CoV-2","AACACTGGATCATGGT",7,1.87,NA,NA,NA,NA,NA,NA,"stop","P7* G86R P96R N109V T201I",5
"lib1","SARS-CoV-2","AACACTGGATCCAGGC",1,1.86,NA,NA,NA,NA,NA,NA,"stop","L38S S45A F99Y S113M P149*",5
"lib1","SARS-CoV-2","AACACTGGATCTCTGA",12,103.35,10.68,-0.09,0.03,2.91,1.05,0,">1 nonsynonymous","T15K V153I",2
"lib1","SARS-CoV-2","AACACTGTACACTCAT",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L P96F D112K T201V",4
"lib1","SARS-CoV-2","AACACTGTGAAAACGT",7,0.13,NA,NA,NA,NA,NA,NA,"stop","K26* C102S N120R L131S",4
"lib1","SARS-CoV-2","AACACTGTGTGATAAA",5,48.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63I G86F R124C",3
"lib1","SARS-CoV-2","AACACTTATACAATAC",2,26.96,8.96,-1.8,0.14,2.48,1.14,0.01,">1 nonsynonymous","I2T K56N P161T",3
"lib1","SARS-CoV-2","AACACTTCAAGAGGAC",1,5.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W106G G146C P149Y",3
"lib1","SARS-CoV-2","AACACTTCAAGCCAAA",4,86.83,10.73,-0.03,0.04,2.92,1.01,0,"1 nonsynonymous","K132T",1
"lib1","SARS-CoV-2","AACACTTCAGAAAAGG",4,73.71,10.65,-0.12,0.05,2.93,1.01,0,">1 nonsynonymous","T63Q D90E",2
"lib1","SARS-CoV-2","AACACTTCGGATTATG",2,100.27,10.72,-0.04,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACACTTGAACATGAA",1,19.65,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S43V T55P K128A Y165D",4
"lib1","SARS-CoV-2","AACACTTGCATGACCT",1,22.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49K K56W P197R",3
"lib1","SARS-CoV-2","AACACTTTAGAACATA",1,9.22,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","N1G V37R N58S P82G F99A A105T R136Q F185A",8
"lib1","SARS-CoV-2","AACACTTTCAGAATGC",1,0.22,NA,NA,NA,NA,NA,NA,"stop","F99* Y121L K128M S147H S200K",5
"lib1","SARS-CoV-2","AACACTTTGACGCAAT",5,0.59,NA,NA,NA,NA,NA,NA,"stop","V11I F62C L122* I142Q",4
"lib1","SARS-CoV-2","AACACTTTTGAGTGGA",2,23.33,10.2,-0.56,0.09,2.91,1.06,0,">1 nonsynonymous","C61S Y66S",2
"lib1","SARS-CoV-2","AACAGAAAAAAAAAAT",3,0.99,NA,NA,NA,NA,NA,NA,"stop","I28W C61P Y91* N107A Y121T C158V",6
"lib1","SARS-CoV-2","AACAGAAAAGCCACAA",7,191.43,9.95,-0.81,0.06,2.87,1.01,0,">1 nonsynonymous","T148S G155Y",2
"lib1","SARS-CoV-2","AACAGAAACGAACGCA",6,117.64,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C6L C61P G83E D112A P177V T201H",6
"lib1","SARS-CoV-2","AACAGAAATACCAAAA",2,9.35,10.6,-0.17,0.08,2.96,1.02,0,">1 nonsynonymous","N4G K114M",2
"lib1","SARS-CoV-2","AACAGAAATAGGTCAA",4,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P N64T S113F Y119S",4
"lib1","SARS-CoV-2","AACAGAAATTAGTAGG",2,1.57,NA,NA,NA,NA,NA,NA,"stop","G9S K48V L122M E154* T201*",5
"lib1","SARS-CoV-2","AACAGAACAACCGACA",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y E76Y G83K D97Y G152Y F160I Q168H P177D",8
"lib1","SARS-CoV-2","AACAGAACACAAACAG",3,28.72,6.1,-4.67,1.06,1.5,1.2,0.03,">1 nonsynonymous","E10K F167H",2
"lib1","SARS-CoV-2","AACAGAACGAACCTGT",1,1.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","AACAGAACGAGAAAAT",9,78.19,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F8T N40M S45Y C150E",4
"lib1","SARS-CoV-2","AACAGAACGGACACGG",2,24.68,9.91,-0.86,0.1,2.16,1,0.01,">1 nonsynonymous","C6R E141Q",2
"lib1","SARS-CoV-2","AACAGAACGGGTGGGG",9,83.98,6,-4.76,0.79,1.5,1.19,0.01,">1 nonsynonymous","F17P N171R",2
"lib1","SARS-CoV-2","AACAGAAGATATTTTT",4,78.77,8.65,-2.11,0.12,1.99,1.12,0.01,">1 nonsynonymous","G74N D90N K132M",3
"lib1","SARS-CoV-2","AACAGAAGGTCCACGG",3,39.59,10.32,-0.45,0.11,2.79,1.01,0.01,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","AACAGAATACATCACT",5,1.07,NA,NA,NA,NA,NA,NA,"stop","R27M L38I P82* T201C",4
"lib1","SARS-CoV-2","AACAGAATATACATAG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","N13* S45K T201N",3
"lib1","SARS-CoV-2","AACAGAATCAAATTAG",1,8.2,10.57,-0.19,0.08,2.94,1.09,0,">1 nonsynonymous","A42W S164M",2
"lib1","SARS-CoV-2","AACAGAATCCCTATTA",2,18.98,10.12,-0.65,0.1,2.36,1,0,">1 nonsynonymous","A105F T201K",2
"lib1","SARS-CoV-2","AACAGAATTAGCGAAA",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M V37W L60P W106R E141K P149F",6
"lib1","SARS-CoV-2","AACAGAATTAGGAGCA",6,2.75,NA,NA,NA,NA,NA,NA,"stop","G101V G146* G174* R179G",4
"lib1","SARS-CoV-2","AACAGAATTTCACTAT",2,112.79,10.2,-0.56,0.05,2.82,1,0,"1 nonsynonymous","Y35D",1
"lib1","SARS-CoV-2","AACAGAATTTCTGAAA",6,9.09,NA,NA,NA,NA,NA,NA,"stop","K87* G146S",2
"lib1","SARS-CoV-2","AACAGACACCTTATAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N1* N120W F160L",3
"lib1","SARS-CoV-2","AACAGACACGAGCCAG",4,14.27,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y35V G101S P149G Q168L",4
"lib1","SARS-CoV-2","AACAGACAGATTTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28Y C49N T85A K94* G101S K114M",6
"lib1","SARS-CoV-2","AACAGACATACAGTAG",4,92.43,9.46,-1.31,0.07,2.68,1.09,0,">1 nonsynonymous","T148M Y165H",2
"lib1","SARS-CoV-2","AACAGACCAGGTTATC",3,49.87,10.86,0.1,0.06,2.89,1.04,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","AACAGACCTAACGAAA",2,6.75,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N24W V37R A81T E141N L183P",5
"lib1","SARS-CoV-2","AACAGACGCATGCGCA",8,118.42,8.26,-2.51,0.15,2.6,1.13,0.01,"1 nonsynonymous","Y175V",1
"lib1","SARS-CoV-2","AACAGACGCGTTCGGT",3,44.13,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F44C S53V I88R L95R S139T",5
"lib1","SARS-CoV-2","AACAGACGTATCGACA",13,5.91,NA,NA,NA,NA,NA,NA,"stop","C6A S41* D97F C150T",4
"lib1","SARS-CoV-2","AACAGACTCATTTACC",7,82.85,10.58,-0.18,0.04,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAGACTCTCCGCCT",3,18.48,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35L P96N N107Q K128G G146V",5
"lib1","SARS-CoV-2","AACAGACTTCAAACAG",1,33.39,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G83C E135D T148C C158S",4
"lib1","SARS-CoV-2","AACAGACTTGTCACCG",1,8.22,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D97H V103Y",2
"lib1","SARS-CoV-2","AACAGAGAAGCAAAAC",3,2.91,NA,NA,NA,NA,NA,NA,"stop","C49S P82W D90C L122*",4
"lib1","SARS-CoV-2","AACAGAGAAGCAGGAA",2,42.25,9.75,-1.02,0.12,2.59,1.05,0.01,">1 nonsynonymous","C31Y N120M",2
"lib1","SARS-CoV-2","AACAGAGCAGAGTACA",4,36.7,8.47,-2.29,0.26,1.57,1.11,0.03,">1 nonsynonymous","G86N T148G T201D",3
"lib1","SARS-CoV-2","AACAGAGCTAAATAAA",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D L60K F99P Q144K",4
"lib1","SARS-CoV-2","AACAGAGGAATACTAT",2,20.44,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","A105N Y119L",2
"lib1","SARS-CoV-2","AACAGAGGACACTCTA",3,88.7,10,-0.76,0.09,2.7,1.01,0,">1 nonsynonymous","C6Q K128P",2
"lib1","SARS-CoV-2","AACAGAGGACGATGTG",4,25.49,10.86,0.09,0.12,2.94,1.06,0,"1 nonsynonymous","N109K",1
"lib1","SARS-CoV-2","AACAGAGGAGTACATA",2,25.61,10.83,0.07,0.1,2.95,1,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","AACAGAGGTGAAAAGG",3,26.15,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V32L D68E I104L F167E G172E",5
"lib1","SARS-CoV-2","AACAGAGTATGTCAGT",6,58.22,9.06,-1.71,0.07,2.75,1.13,0,">1 nonsynonymous","A81S Y143V",2
"lib1","SARS-CoV-2","AACAGAGTCCCACGTT",2,66.59,7.61,-3.15,0.27,1.5,1.04,0.02,">1 nonsynonymous","V11F Y91E",2
"lib1","SARS-CoV-2","AACAGATAATAGCATA",1,25.07,8.73,-2.04,0.15,2.26,1.23,0.01,">1 nonsynonymous","T3Y C61N K132V A145C",4
"lib1","SARS-CoV-2","AACAGATAGGAGAAGG",5,119.18,8.89,-1.88,0.11,2.74,1.13,0,">1 nonsynonymous","I142R N151Q",2
"lib1","SARS-CoV-2","AACAGATAGTAAACCA",2,36.1,9.53,-1.24,0.2,1.5,1.14,0.02,">1 nonsynonymous","W106G L122T S129F",3
"lib1","SARS-CoV-2","AACAGATCAACCTAAA",1,23.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51D E76T P96S G101A S113T D137V",6
"lib1","SARS-CoV-2","AACAGATCCTTGAATT",3,11.65,9,-1.77,0.22,1.67,1.26,0.03,">1 nonsynonymous","N4H N13L L60F N109R",4
"lib1","SARS-CoV-2","AACAGATGACTCTCTA",6,88.67,9.52,-1.24,0.15,1.73,1.11,0.01,">1 nonsynonymous","V37E A89I F134N T201R",4
"lib1","SARS-CoV-2","AACAGATGCACACCTG",4,42.2,10.73,-0.04,0.09,2.9,1.05,0,">1 nonsynonymous","W23F T55N",2
"lib1","SARS-CoV-2","AACAGATGCACTCTTG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","S45N N130C E135* R179V",4
"lib1","SARS-CoV-2","AACAGATGTCTGGAAA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","A42* K128G T201D",3
"lib1","SARS-CoV-2","AACAGATTCCAACAGC",1,50.97,9.51,-1.26,0.14,1.94,1.04,0.01,">1 nonsynonymous","W106R K114L G174S K199T",4
"lib1","SARS-CoV-2","AACAGATTGAGAATAA",1,4.18,NA,NA,NA,NA,NA,NA,"stop","L5A Y35A S43E G101* T201K",5
"lib1","SARS-CoV-2","AACAGATTGAGTAAAT",4,66.46,10.54,-0.22,0.06,2.87,1.02,0,">1 nonsynonymous","F44K T201W",2
"lib1","SARS-CoV-2","AACAGATTTGGTATGC",13,71.47,10.66,-0.11,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAGCAACTTGAAAA",6,107.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14S V37I Y91R G166N Y175M",5
"lib1","SARS-CoV-2","AACAGCACCTATCTTT",1,31.72,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","R73E G166R K198L",3
"lib1","SARS-CoV-2","AACAGCCCAATTCAAG",1,10.79,10.19,-0.57,0.11,2.98,1.04,0,">1 nonsynonymous","Y39S S45D I138H",3
"lib1","SARS-CoV-2","AACAGCCCGTTTCGAC",11,47.72,7.67,-3.09,0.43,1.5,1.05,0.07,">1 nonsynonymous","Y39K G86R A105L G155I",4
"lib1","SARS-CoV-2","AACAGCCTCTTATAAT",3,13.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36R G83V V103G",3
"lib1","SARS-CoV-2","AACAGCCTTAACCAGT",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140L S164I P177F",3
"lib1","SARS-CoV-2","AACAGCTCCAAATACT",1,53.95,9.99,-0.78,0.07,2.9,1.06,0,"1 nonsynonymous","L125P",1
"lib1","SARS-CoV-2","AACAGCTCCAGACCAT",1,173.11,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V71W L95G G101W R124L E135P",5
"lib1","SARS-CoV-2","AACAGCTCTCCAATGG",1,8.11,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","Y35Q T85S D97G Y119H G146M",5
"lib1","SARS-CoV-2","AACAGCTGCCACACAA",13,88.04,9.08,-1.68,0.2,1.5,1.11,0.02,">1 nonsynonymous","P7V N64S I88L",3
"lib1","SARS-CoV-2","AACAGCTTCAAAGCAC",3,2.21,NA,NA,NA,NA,NA,NA,"stop","L38* L125G",2
"lib1","SARS-CoV-2","AACAGGAAATTAACCC",4,0.03,NA,NA,NA,NA,NA,NA,"stop","D34H N120* K132L N157L S200Y",5
"lib1","SARS-CoV-2","AACAGGAATATTAACG",3,13.46,10.38,-0.38,0.11,2.95,1,0.01,">1 nonsynonymous","D98N Y178L",2
"lib1","SARS-CoV-2","AACAGGAGCTTGAAAG",16,83.73,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","F99C N107D",2
"lib1","SARS-CoV-2","AACAGGATAAATACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G116D P177*",2
"lib1","SARS-CoV-2","AACAGGATCTCTGAAC",14,7.94,NA,NA,NA,NA,NA,NA,"stop","T3F S129L E135I L187*",4
"lib1","SARS-CoV-2","AACAGGATGAGAACCT",2,22.23,9.19,-1.57,0.25,1.83,1.04,0.03,">1 nonsynonymous","A14V P161S T201S",3
"lib1","SARS-CoV-2","AACAGGATGGCAAATT",1,11.07,8.38,-2.38,0.4,1.5,1.06,0.05,">1 nonsynonymous","C61R K94V P149H",3
"lib1","SARS-CoV-2","AACAGGATTTATAATA",2,14.74,9.69,-1.07,0.17,2.1,1.06,0.02,">1 nonsynonymous","F8G L60S A192E",3
"lib1","SARS-CoV-2","AACAGGCACAGTTAAA",1,65.88,10.82,0.06,0.04,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAGGCACTGCAGTG",9,37.48,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","N4W N64K P82A Y93P V103P E186V",6
"lib1","SARS-CoV-2","AACAGGCCATCGCAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","P82Q N107* V182Y",3
"lib1","SARS-CoV-2","AACAGGCTATTCAACG",2,23.78,10.69,-0.07,0.04,2.98,1,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","AACAGGCTTACGAGTT",6,92.76,10.71,-0.05,0.1,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACAGGGAAACAATGA",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I N118V V181K",3
"lib1","SARS-CoV-2","AACAGGGAAATAATAT",4,32.54,10.58,-0.18,0.07,2.94,1.03,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","AACAGGGAAGGTAAAA",3,43.11,10.58,-0.19,0.05,2.86,1.07,0,"1 nonsynonymous","E135A",1
"lib1","SARS-CoV-2","AACAGGGATAAAAACA",18,227.17,10.82,0.05,0.07,2.93,1.04,0,"1 nonsynonymous","L5D",1
"lib1","SARS-CoV-2","AACAGGGCGTTCACGG",2,5.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1E D59R L95A V103S G117Y",5
"lib1","SARS-CoV-2","AACAGGGGATAGGGGT",9,87.75,9.81,-0.95,0.03,2.91,1.03,0,"1 nonsynonymous","N118R",1
"lib1","SARS-CoV-2","AACAGGGGCTCCTAAA",3,14.7,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L5W Y39A Q84S Y143R N157Y F167M",6
"lib1","SARS-CoV-2","AACAGGGTCAGACACC",1,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181K",1
"lib1","SARS-CoV-2","AACAGGGTGTTAGGGT",3,62.25,10.64,-0.12,0.05,2.88,1.04,0,">1 nonsynonymous","L5S L122W",2
"lib1","SARS-CoV-2","AACAGGTAAAAAAACA",1,13.18,8.56,-2.2,0.11,2.79,1,0,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","AACAGGTACACAATCC",12,85.97,9.59,-1.18,0.1,1.88,1.13,0,">1 nonsynonymous","P96E V115M",2
"lib1","SARS-CoV-2","AACAGGTACACGAGAA",3,70.68,10.69,-0.07,0.05,2.88,1.06,0,">1 nonsynonymous","S29V S43K K114I",3
"lib1","SARS-CoV-2","AACAGGTAGTATGATA",3,9.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I88V A105S S164I F185I",4
"lib1","SARS-CoV-2","AACAGGTGTGACTGAG",1,14.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","P54A T63L I88N",3
"lib1","SARS-CoV-2","AACAGTAAAAAAAAAA",1,6.88,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6P D68R D98I S129L",4
"lib1","SARS-CoV-2","AACAGTAAAGAAATCA",3,27.58,6,-4.76,1.22,1.5,1.24,0.02,">1 nonsynonymous","D137R S147Y G155Y",3
"lib1","SARS-CoV-2","AACAGTAAATAAAAAT",2,45.35,9.84,-0.92,0.06,2.84,1.01,0,"1 nonsynonymous","G74S",1
"lib1","SARS-CoV-2","AACAGTAATTAAAATT",8,150.61,10.08,-0.69,0.09,2.36,1.01,0,">1 nonsynonymous","Y39R A105C",2
"lib1","SARS-CoV-2","AACAGTACAGACAACG",4,20.46,10.32,-0.44,0.08,2.89,1.06,0,">1 nonsynonymous","G9F R27S S184Y P197M",4
"lib1","SARS-CoV-2","AACAGTACCAACAATG",1,0.39,NA,NA,NA,NA,NA,NA,"stop","T55S E154*",2
"lib1","SARS-CoV-2","AACAGTACCAGTATCA",1,18.7,10.22,-0.54,0.06,3,1.03,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","AACAGTACTCTACTCA",7,0.76,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","AACAGTAGAGTTCTGA",7,54.42,8.82,-1.95,0.28,1.5,1,0.04,">1 nonsynonymous","N24L N58I D97V K198T",4
"lib1","SARS-CoV-2","AACAGTAGGGTTCGAA",1,3.49,NA,NA,NA,NA,NA,NA,"stop","T46L L57V N130*",3
"lib1","SARS-CoV-2","AACAGTATAACTGGCG",1,10.18,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","E10F A22Y L60I N120T",4
"lib1","SARS-CoV-2","AACAGTATCACTTGAT",2,48.33,10.46,-0.3,0.05,2.86,1.02,0,">1 nonsynonymous","G9K E141R L187Y",3
"lib1","SARS-CoV-2","AACAGTATCTCCCTAG",1,12.71,6,-4.76,0.55,2.05,1.16,0,">1 nonsynonymous","F47I A105L C150R",3
"lib1","SARS-CoV-2","AACAGTATCTCGTCGG",1,20.61,10.22,-0.54,0.06,2.99,1,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","AACAGTATTCATCCGT",3,26.96,6.23,-4.53,0.85,1.5,1.17,0.02,">1 nonsynonymous","G9S Y93I L122C",3
"lib1","SARS-CoV-2","AACAGTCAGCCAAACT",6,91.34,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R16T I72K F134V F167C",4
"lib1","SARS-CoV-2","AACAGTCAGGAAAAAC",2,53.24,10.6,-0.16,0.05,2.93,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AACAGTCGGCGATTTG",4,13.65,9.17,-1.59,0.21,1.5,1.11,0.02,">1 nonsynonymous","A81L N171I",2
"lib1","SARS-CoV-2","AACAGTCGGCTCGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib1","SARS-CoV-2","AACAGTGAAAATCAAT",4,35.45,10.38,-0.38,0.05,2.89,1.04,0,"1 nonsynonymous","F156I",1
"lib1","SARS-CoV-2","AACAGTGAAAGAAACA",6,76.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59A I72S G116R N157I",4
"lib1","SARS-CoV-2","AACAGTGACACACACA",4,8.34,NA,NA,NA,NA,NA,NA,"stop","S69M A105K F126Y V173*",4
"lib1","SARS-CoV-2","AACAGTGAGGATACAT",4,28.76,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","G9L F44T L60F V103N",4
"lib1","SARS-CoV-2","AACAGTGATAAATATA",1,16.41,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K48H F99S L122S F167V S184N",5
"lib1","SARS-CoV-2","AACAGTGATGGACGTC",16,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79K G86R L95P",3
"lib1","SARS-CoV-2","AACAGTGCCAATGTTT",1,41.77,9.74,-1.02,0.05,2.95,1.02,0,">1 nonsynonymous","D90S Y175H",2
"lib1","SARS-CoV-2","AACAGTGGACCTTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V11W V37L N107G L188*",4
"lib1","SARS-CoV-2","AACAGTGGATCTTAAT",4,50.39,10.71,-0.05,0.07,2.92,1.04,0,">1 nonsynonymous","Y39V C61M",2
"lib1","SARS-CoV-2","AACAGTGGTATCCTCC",6,0.73,NA,NA,NA,NA,NA,NA,"stop","N1P E10C G86Q N92* N110T R136T F160L",7
"lib1","SARS-CoV-2","AACAGTGTACCTCGAA",3,35.11,8.82,-1.94,0.41,1.5,1,0.08,">1 nonsynonymous","Y91V P96N P133H",3
"lib1","SARS-CoV-2","AACAGTGTATCCGCAT",2,19.04,9.78,-0.98,0.08,2.96,1.05,0,"1 nonsynonymous","T170G",1
"lib1","SARS-CoV-2","AACAGTGTCTGCCATA",1,9.12,10.74,-0.02,0.07,2.92,1,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","AACAGTTAACTATACC",10,194.11,9.99,-0.78,0.03,2.88,1.03,0,"1 nonsynonymous","A145R",1
"lib1","SARS-CoV-2","AACAGTTATCATGTCT",1,80.94,10.81,0.05,0.07,2.94,1.06,0,"1 nonsynonymous","L188N",1
"lib1","SARS-CoV-2","AACAGTTATTAGAACT",14,210.59,10.81,0.05,0.07,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AACAGTTATTGGGTTA",5,121.15,10.49,-0.27,0.03,2.96,1.02,0,"1 nonsynonymous","F44D",1
"lib1","SARS-CoV-2","AACAGTTCATAATTGA",6,95.69,8.78,-1.98,0.09,2.66,1.11,0,">1 nonsynonymous","S43V T100E Y119N E154V S184W",5
"lib1","SARS-CoV-2","AACAGTTCATATTGAA",5,86.6,9.22,-1.54,0.07,2.83,1.1,0,"1 nonsynonymous","G117H",1
"lib1","SARS-CoV-2","AACAGTTCGCATACAA",13,38.96,8.94,-1.83,0.26,1.5,1,0.04,">1 nonsynonymous","F47I K132L L183A",3
"lib1","SARS-CoV-2","AACAGTTGAAAGTGGG",6,37.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C31K V103N R124V E135S Q144S",5
"lib1","SARS-CoV-2","AACAGTTGCCGAATAC",13,133.32,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","L95N L162E",2
"lib1","SARS-CoV-2","AACAGTTTACTACAGG",4,10.81,10.72,-0.04,0.11,2.89,1.04,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","AACATAAAAGCAAAAC",4,71.78,6.66,-4.1,0.26,1.5,1.12,0.01,">1 nonsynonymous","G9V C61Y Y175E",3
"lib1","SARS-CoV-2","AACATAAAAGCGGGCC",8,0.89,NA,NA,NA,NA,NA,NA,"stop","F17M S45L Y119*",3
"lib1","SARS-CoV-2","AACATAAAATAGAAAT",2,89.71,10.68,-0.08,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATAAACATCACCA",2,110.2,8.14,-2.62,0.19,2.02,1.1,0.01,">1 nonsynonymous","L38V P149G Y175A",3
"lib1","SARS-CoV-2","AACATAAACCAGTGAC",7,14.1,NA,NA,NA,NA,NA,NA,"stop","A14G C61V T85* N120T",4
"lib1","SARS-CoV-2","AACATAAACTCCCTCT",4,1.9,NA,NA,NA,NA,NA,NA,"stop","S36C K56V F99* V173I",4
"lib1","SARS-CoV-2","AACATAAAGAAAAAGC",4,44.4,10.65,-0.11,0.07,2.89,1.02,0,">1 nonsynonymous","S36R S184V",2
"lib1","SARS-CoV-2","AACATAAAGAAATAAT",2,23.03,10.05,-0.72,0.14,2.59,1.12,0.01,">1 nonsynonymous","C61P N64A R127S",3
"lib1","SARS-CoV-2","AACATAAAGACTATAA",21,368.19,10.36,-0.4,0.04,2.85,1.03,0,">1 nonsynonymous","A14G K128N",2
"lib1","SARS-CoV-2","AACATAAAGCACCGCT",6,85.18,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37P V77G N109R C150K N157F",5
"lib1","SARS-CoV-2","AACATAAAGGAAAGAC",16,191.71,8.75,-2.01,0.12,2.21,1.14,0.01,">1 nonsynonymous","F99Y G146T",2
"lib1","SARS-CoV-2","AACATAAATATGCCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L D137V",2
"lib1","SARS-CoV-2","AACATAAATCAAACAA",2,45.56,10.79,0.02,0.08,2.92,1.05,0,"1 nonsynonymous","P197C",1
"lib1","SARS-CoV-2","AACATAAATCTTGATA",1,64.22,9.97,-0.8,0.08,2.31,1.06,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AACATAAATGATACCG",7,39.04,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V103S N107L G116S G152W F160L",5
"lib1","SARS-CoV-2","AACATAAATGTCAAAT",1,16.1,10.82,0.05,0.09,2.75,1.07,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","AACATAAATTTTTTGA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","V11* L95K S147V",3
"lib1","SARS-CoV-2","AACATAACACGCATAC",4,1.14,NA,NA,NA,NA,NA,NA,"stop","S41L T100Y S164R T170*",4
"lib1","SARS-CoV-2","AACATAACACTAGGTT",4,44.03,10.74,-0.03,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATAACAGGAGGTG",3,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S G74R S113G E141F L162S",5
"lib1","SARS-CoV-2","AACATAACATAGGGAG",5,116.86,10.75,-0.02,0.05,2.89,1.05,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","AACATAACCCCCGAAT",9,0.18,NA,NA,NA,NA,NA,NA,"stop","N1R E10L F47Y C61* A105E",5
"lib1","SARS-CoV-2","AACATAACCTTTGCTA",2,63.07,8.69,-2.08,0.12,2.49,1.18,0.01,">1 nonsynonymous","N1A R73P G174K",3
"lib1","SARS-CoV-2","AACATAACGAGGCATA",1,11.88,10.36,-0.41,0.07,2.9,1.01,0.01,">1 nonsynonymous","C6N G196A",2
"lib1","SARS-CoV-2","AACATAACTGCATGCA",5,143.02,9.74,-1.02,0.04,2.8,1.02,0,">1 nonsynonymous","Y35I N120I G174W H189R",4
"lib1","SARS-CoV-2","AACATAAGAAAACAGT",5,58.99,10.75,-0.01,0.1,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATAAGAACCTGCA",2,9.9,7.38,-3.38,0.67,1.89,1.08,0.08,">1 nonsynonymous","S19R E76T C102G S129F T201H",5
"lib1","SARS-CoV-2","AACATAAGAGTTAGGC",6,30.2,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P82K G86N",2
"lib1","SARS-CoV-2","AACATAAGATCCGGTA",2,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R N110K",2
"lib1","SARS-CoV-2","AACATAAGCCGACCCC",9,122.88,8.29,-2.47,0.16,1.75,1.13,0.01,">1 nonsynonymous","N107V N120E T170M",3
"lib1","SARS-CoV-2","AACATAAGCGACGGAA",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L N107L N118K S139V",4
"lib1","SARS-CoV-2","AACATAATAACACAGG",1,11.49,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","K56G K94F G101C",3
"lib1","SARS-CoV-2","AACATAATAGTTTGAA",4,18.56,8.74,-2.02,0.34,1.5,1,0.08,">1 nonsynonymous","K56R P96L S129I",3
"lib1","SARS-CoV-2","AACATAATATTATTAC",2,4.79,NA,NA,NA,NA,NA,NA,"stop","K128* Y175N F185L T201G",4
"lib1","SARS-CoV-2","AACATAATCTGTTGTT",1,31.07,9.24,-1.52,0.2,2.35,1.07,0.02,">1 nonsynonymous","N64I S113G Y121Q K128H",4
"lib1","SARS-CoV-2","AACATAATCTTTTATA",8,41.14,10.15,-0.61,0.37,1.5,1,0.05,">1 nonsynonymous","N58K I104N",2
"lib1","SARS-CoV-2","AACATACAAAAAAGGG",8,13.22,7.73,-3.04,0.44,1.5,1,0.07,">1 nonsynonymous","N92V V180M",2
"lib1","SARS-CoV-2","AACATACAAAGTTAAT",7,175.54,10.3,-0.46,0.05,2.71,1.01,0,">1 nonsynonymous","L60P Q84K N110K",3
"lib1","SARS-CoV-2","AACATACAATCGTTCA",8,0.89,NA,NA,NA,NA,NA,NA,"stop","T15H Y21* Y91C I142P P149H V182A",6
"lib1","SARS-CoV-2","AACATACACACAGGCG",6,75.28,9.74,-1.03,0.1,1.8,1.06,0,">1 nonsynonymous","A14V T55I F62G",3
"lib1","SARS-CoV-2","AACATACACACTACCT",1,35.88,9.85,-0.91,0.1,1.9,1.08,0,">1 nonsynonymous","P133L N151K",2
"lib1","SARS-CoV-2","AACATACACGGAGCAT",17,389.47,10.47,-0.29,0.03,2.88,1.03,0,">1 nonsynonymous","D90M N151S",2
"lib1","SARS-CoV-2","AACATACACGTTAATG",2,5.19,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S41L W106T S113L I138G",4
"lib1","SARS-CoV-2","AACATACATCTGGTCA",3,112.46,10.24,-0.52,0.06,2.75,1.02,0,">1 nonsynonymous","K94R D98W",2
"lib1","SARS-CoV-2","AACATACATCTTTCAG",4,16.5,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A42G C102R",2
"lib1","SARS-CoV-2","AACATACCCATTCAAC",1,18.97,10.28,-0.48,0.13,2.75,1.19,0.01,"1 nonsynonymous","T140M",1
"lib1","SARS-CoV-2","AACATACCTAGAGTAA",3,4.22,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","AACATACCTCTTATCA",8,0.31,NA,NA,NA,NA,NA,NA,"stop","Y35S D98L W106* E141V",4
"lib1","SARS-CoV-2","AACATACGCGATATAA",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C K87C V182G",3
"lib1","SARS-CoV-2","AACATACGCTATAAGT",1,0.69,NA,NA,NA,NA,NA,NA,"stop","Y93C C102L R124S E135*",4
"lib1","SARS-CoV-2","AACATACGTCTATATT",1,18.9,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","N64F D90S W106I N151S Y178G",5
"lib1","SARS-CoV-2","AACATACTATTAACAC",3,84.51,6,-4.76,1.91,1.5,1.09,0.01,">1 nonsynonymous","K48I F126H C158M K198I",4
"lib1","SARS-CoV-2","AACATACTCCTTTAAT",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78I A105S C150S",3
"lib1","SARS-CoV-2","AACATACTGAATCGAG",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I K94Q",2
"lib1","SARS-CoV-2","AACATAGAAAATGTCT",13,58.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19K F44R G51V G74C L122W",5
"lib1","SARS-CoV-2","AACATAGAACGACGAG",8,32.6,8.47,-2.3,0.17,1.64,1.09,0.01,">1 nonsynonymous","A67V I88M Y121F",3
"lib1","SARS-CoV-2","AACATAGAACTAAGTA",3,65.97,10.68,-0.08,0.05,2.87,1.07,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","AACATAGAACTAATCA",5,33.67,9.56,-1.2,0.12,1.8,1.15,0.01,">1 nonsynonymous","T63S A105N",2
"lib1","SARS-CoV-2","AACATAGACAGCAATA",3,7.58,10.5,-0.26,0.07,2.75,1.17,0,"1 nonsynonymous","L131M",1
"lib1","SARS-CoV-2","AACATAGAGGGTAATG",2,42.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I104T L162N",2
"lib1","SARS-CoV-2","AACATAGCAGACTGTA",2,41.24,9.85,-0.92,0.11,2.76,1.03,0,">1 nonsynonymous","K26M V37G T100S F156L",4
"lib1","SARS-CoV-2","AACATAGCGGAAAAAA",5,20.61,9.74,-1.03,0.09,2.1,1.1,0,">1 nonsynonymous","I28G E186F",2
"lib1","SARS-CoV-2","AACATAGGAGTGGACG",1,0.16,NA,NA,NA,NA,NA,NA,"stop","F8L D59* Y91* D97W",4
"lib1","SARS-CoV-2","AACATAGGCCTACACT",4,17.36,6,-4.76,2,1.5,1.15,0.03,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","AACATAGGGAATCGCA",4,97.71,10.27,-0.5,0.04,2.95,1.03,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AACATAGGTAACAACC",3,0.59,NA,NA,NA,NA,NA,NA,"stop","N40* K87C P197S",3
"lib1","SARS-CoV-2","AACATAGTAGCCATTA",7,87.27,8.63,-2.13,0.12,2.7,1.08,0.01,">1 nonsynonymous","G146R G174L",2
"lib1","SARS-CoV-2","AACATAGTATCACACT",3,19.53,10.73,-0.03,0.07,2.99,1,0,">1 nonsynonymous","Y39K T148E",2
"lib1","SARS-CoV-2","AACATAGTCACAGATA",1,59.03,8.82,-1.94,0.07,2.96,1.04,0,">1 nonsynonymous","Y121M T170N",2
"lib1","SARS-CoV-2","AACATAGTTAATTGTT",1,0.13,NA,NA,NA,NA,NA,NA,"stop","N13V K128* T148V",3
"lib1","SARS-CoV-2","AACATATAAAGGAGAG",3,32.85,10.31,-0.46,0.05,2.91,1,0,">1 nonsynonymous","E10N N24H K56R",3
"lib1","SARS-CoV-2","AACATATAAGAGATAG",1,18.81,8.75,-2.01,0.13,2.77,1.2,0.01,">1 nonsynonymous","Y66K N171E",2
"lib1","SARS-CoV-2","AACATATACTAGAAAA",1,44.5,8.31,-2.45,0.17,2.5,1.14,0.01,">1 nonsynonymous","E10D E141M P149S G166P P197L",5
"lib1","SARS-CoV-2","AACATATAGTCGATCA",6,55.18,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y39H Y66S G83D V103A A190R",5
"lib1","SARS-CoV-2","AACATATATATCCCGG",2,12.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6T L125T D137R",3
"lib1","SARS-CoV-2","AACATATCAACCGCAA",12,224.61,10.51,-0.25,0.04,2.95,1,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","AACATATCACGAATAC",1,37.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I138R Y165E",2
"lib1","SARS-CoV-2","AACATATCAGAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Y T15S N24F G152M T170P S200*",6
"lib1","SARS-CoV-2","AACATATCCAACTCTA",4,19.97,6.13,-4.64,0.74,1.5,1.12,0.02,">1 nonsynonymous","C31L S43V D59E Y91T Q163G",5
"lib1","SARS-CoV-2","AACATATCCCCTTCAT",5,90.86,6.77,-4,0.24,1.5,1.14,0.01,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","AACATATCTTTTCGGA",2,59.94,10.71,-0.06,0.07,2.95,1.02,0,"1 nonsynonymous","N24T",1
"lib1","SARS-CoV-2","AACATATGAATGTGAA",4,18.62,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","C49R P133W Y175S",3
"lib1","SARS-CoV-2","AACATATGATTATCCT",1,12.91,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S41A N58T T85D K94L A105S G146S A190V G196W",8
"lib1","SARS-CoV-2","AACATATGTCCAAGTA",4,56.16,10.86,0.1,0.07,2.94,1.03,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","AACATATGTGATATTA",3,178.23,9.79,-0.98,0.11,1.95,1.1,0,"1 nonsynonymous","P96M",1
"lib1","SARS-CoV-2","AACATATTATAACTTT",5,8.26,NA,NA,NA,NA,NA,NA,"stop","N1F V11G V103E N107* Y143*",5
"lib1","SARS-CoV-2","AACATATTATGGATAT",6,19.52,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y21I Y66N G152V L162M S184A",5
"lib1","SARS-CoV-2","AACATATTCATGATCC",3,10.91,6,-4.76,1.76,1.5,1.07,0.01,">1 nonsynonymous","P82Q F167L C195H",3
"lib1","SARS-CoV-2","AACATATTCCTAGTAT",6,89,10.78,0.02,0.07,2.92,1.04,0,"1 nonsynonymous","N120K",1
"lib1","SARS-CoV-2","AACATATTCTGTAATC",5,13.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15M K48C D90L L162H",4
"lib1","SARS-CoV-2","AACATATTGCTCCGCC",4,80.63,9.88,-0.89,0.1,2.07,1.08,0,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","AACATATTGGAAGAAT",3,37.74,9.97,-0.8,0.1,2.81,1.06,0,"1 nonsynonymous","G116C",1
"lib1","SARS-CoV-2","AACATATTTGGTATCT",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L L57Y F99L Y119G T148Y",5
"lib1","SARS-CoV-2","AACATCAACCACGTAC",6,46.63,10.48,-0.29,0.09,2.78,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATCAAGAAGCACT",4,84.14,6.13,-4.64,0.53,1.5,1.11,0.01,">1 nonsynonymous","V37M C49S N118H",3
"lib1","SARS-CoV-2","AACATCAAGAATCGAC",1,22.41,7.17,-3.59,0.58,1.5,1.18,0.07,">1 nonsynonymous","S41N F62N P133T T140A G152T",5
"lib1","SARS-CoV-2","AACATCAAGTCCAAAG",5,52.85,8.04,-2.72,0.24,1.66,1.22,0.02,">1 nonsynonymous","L60I N120H P161N",3
"lib1","SARS-CoV-2","AACATCAAGTTAGTAC",1,24.06,6,-4.76,1.2,1.5,1.13,0.01,">1 nonsynonymous","S19M A22T N40V G86N W106S T148R",6
"lib1","SARS-CoV-2","AACATCAATATTAAAT",6,38.68,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77K N107T P169F",3
"lib1","SARS-CoV-2","AACATCAATCTTCTCT",2,1.12,NA,NA,NA,NA,NA,NA,"stop","T85R Y175* P197N",3
"lib1","SARS-CoV-2","AACATCAATGGAAATG",1,12.08,6.25,-4.52,0.74,1.5,1.09,0.04,">1 nonsynonymous","N4H A89L T170R",3
"lib1","SARS-CoV-2","AACATCACAAACCGAC",10,462.19,10.59,-0.18,0.03,2.93,1.03,0,"1 nonsynonymous","Y178M",1
"lib1","SARS-CoV-2","AACATCACCTCTAATC",2,86.67,10.49,-0.27,0.03,2.91,1.01,0,">1 nonsynonymous","I2L K87I",2
"lib1","SARS-CoV-2","AACATCACGGTTTCTT",2,62.62,10.38,-0.39,0.07,2.92,1,0,">1 nonsynonymous","T3L G9W A145V",3
"lib1","SARS-CoV-2","AACATCACGTAAATTA",3,31.36,9.2,-1.57,0.14,1.88,1.16,0.01,">1 nonsynonymous","D98M Q144C",2
"lib1","SARS-CoV-2","AACATCACTCTAAGTA",6,0.7,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib1","SARS-CoV-2","AACATCAGATTATCAC",4,58.18,10.44,-0.32,0.04,2.92,1.03,0,"1 nonsynonymous","N13H",1
"lib1","SARS-CoV-2","AACATCAGCTTATTAC",2,7.17,7.16,-3.6,0.74,1.5,1.17,0.05,">1 nonsynonymous","S45I F99G",2
"lib1","SARS-CoV-2","AACATCAGGCCCCGGC",2,19.24,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","S41P I80T F134V",3
"lib1","SARS-CoV-2","AACATCATAACAGCCT",2,15.64,9.92,-0.84,0.07,2.9,1.06,0,">1 nonsynonymous","K114H R127A",2
"lib1","SARS-CoV-2","AACATCATAACCAGCC",4,28.54,6.74,-4.03,0.41,1.5,1.13,0.03,">1 nonsynonymous","G9K Y91I Y143Q",3
"lib1","SARS-CoV-2","AACATCATAACTCAAA",3,50.46,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93P N107R G116S L162V",4
"lib1","SARS-CoV-2","AACATCATATCTAACG",7,50.84,9.28,-1.49,0.18,1.67,1.16,0.01,">1 nonsynonymous","F17L R136L",2
"lib1","SARS-CoV-2","AACATCATTGTTTCCC",10,183.61,9.93,-0.84,0.09,2.3,1.08,0,">1 nonsynonymous","D34P D59L",2
"lib1","SARS-CoV-2","AACATCCAAAGTCCCC",3,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S41V A81L G86A L95T E141F",6
"lib1","SARS-CoV-2","AACATCCAACACCAAT",1,16.58,10.73,-0.03,0.09,2.93,1,0,">1 nonsynonymous","D98S K132N",2
"lib1","SARS-CoV-2","AACATCCAAGGATGCA",4,27.36,10.65,-0.11,0.08,2.89,1.05,0,"1 nonsynonymous","N120H",1
"lib1","SARS-CoV-2","AACATCCAAGTAAGCT",2,19.63,9.99,-0.78,0.05,2.98,1.02,0,">1 nonsynonymous","Q168T L187M",2
"lib1","SARS-CoV-2","AACATCCACCGTGCTA",3,60.8,8.21,-2.56,0.17,2.39,1.09,0.01,"1 nonsynonymous","N157P",1
"lib1","SARS-CoV-2","AACATCCCCCAAATAA",9,26.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I88Y I104S N130P",3
"lib1","SARS-CoV-2","AACATCCGCAATAGAC",4,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A C102N K114M T140A",4
"lib1","SARS-CoV-2","AACATCCGCCTAAGGC",1,97.85,10.64,-0.12,0.04,2.91,1.03,0,">1 nonsynonymous","F185Y T201M",2
"lib1","SARS-CoV-2","AACATCCTAAGTTCAA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","L5I R27* N40H Y66P S147R",5
"lib1","SARS-CoV-2","AACATCCTATTATATT",2,35.16,9.73,-1.03,0.1,2.51,1.09,0.01,"1 nonsynonymous","L131F",1
"lib1","SARS-CoV-2","AACATCCTGGGTCGAG",7,1.46,NA,NA,NA,NA,NA,NA,"stop","C49T Y50H R127M Q176* K199M",5
"lib1","SARS-CoV-2","AACATCCTTTGAAACA",2,28.4,9.44,-1.32,0.16,1.82,1.18,0.01,">1 nonsynonymous","S45Y A67T",2
"lib1","SARS-CoV-2","AACATCGAAGTAATCA",2,21.64,9.12,-1.64,0.15,2.5,1.1,0.01,">1 nonsynonymous","V37G S45Y A105T Q144R F156I",5
"lib1","SARS-CoV-2","AACATCGATACAACCT",1,7.1,8.22,-2.55,0.42,1.54,1.3,0.05,">1 nonsynonymous","V37M L95T T140G",3
"lib1","SARS-CoV-2","AACATCGGCGTCCTAA",13,94.03,10.05,-0.72,0.08,2.36,1.01,0,">1 nonsynonymous","N110D Y123L Y143L",3
"lib1","SARS-CoV-2","AACATCGGGCACCCCT",3,61.65,8.34,-2.42,0.12,2.35,1.05,0.01,">1 nonsynonymous","C6P F126I F134Y",3
"lib1","SARS-CoV-2","AACATCGTACATCTGC",1,34.56,10.65,-0.11,0.06,2.93,1.05,0,">1 nonsynonymous","N1K N110S T201M",3
"lib1","SARS-CoV-2","AACATCTAAAAATAAG",1,20.07,9.98,-0.79,0.18,2.59,1.09,0.02,">1 nonsynonymous","T3A G83V K198R",3
"lib1","SARS-CoV-2","AACATCTAAACCCGGC",5,1.12,NA,NA,NA,NA,NA,NA,"stop","I80M K87*",2
"lib1","SARS-CoV-2","AACATCTAATTGCAGC",2,8.39,6.45,-4.31,0.85,1.5,1.18,0.04,">1 nonsynonymous","V11D S19W Y93R K128R",4
"lib1","SARS-CoV-2","AACATCTATAGACTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34* T100P N120Q S129V",4
"lib1","SARS-CoV-2","AACATCTATCCCGAAG",3,66.46,10.1,-0.67,0.08,2.5,1.01,0,">1 nonsynonymous","P54D D59L",2
"lib1","SARS-CoV-2","AACATCTATTCTTTAC",1,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N S184P",2
"lib1","SARS-CoV-2","AACATCTCATCCTTCG",1,32.75,10.14,-0.63,0.09,2.78,1.04,0,">1 nonsynonymous","T46F P96S",2
"lib1","SARS-CoV-2","AACATCTCATGTTCAG",5,179.61,10.74,-0.03,0.07,2.9,1.07,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","AACATCTCCAGATATC",7,72.98,8.31,-2.46,0.16,1.5,1.24,0.01,">1 nonsynonymous","D97F N107V",2
"lib1","SARS-CoV-2","AACATCTGATAAGCCA",1,21.68,10.21,-0.55,0.07,2.82,1.08,0,">1 nonsynonymous","S45D K87W P149H K198M",4
"lib1","SARS-CoV-2","AACATCTGTGCGTGAG",1,35.46,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19M Y39L L60M I72S F160I P197K",6
"lib1","SARS-CoV-2","AACATCTTCATAGGCA",1,5.59,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N30V T85C C102S E135R",4
"lib1","SARS-CoV-2","AACATCTTGAAGTCGT",6,18.11,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V180S",1
"lib1","SARS-CoV-2","AACATCTTGGACTGCT",2,42.87,8.69,-2.08,0.1,2.65,1.12,0,">1 nonsynonymous","G9S Y143C",2
"lib1","SARS-CoV-2","AACATCTTTCCTTCCA",1,1.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41H",1
"lib1","SARS-CoV-2","AACATGAAAACTCGAC",4,20.79,6.44,-4.32,0.54,1.5,1.09,0.04,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","AACATGAACTATGGAA",5,67.09,8.63,-2.14,0.19,1.69,1.22,0.02,">1 nonsynonymous","L60R D112V",2
"lib1","SARS-CoV-2","AACATGAATCAAATCT",3,29.4,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","K87L P177N",2
"lib1","SARS-CoV-2","AACATGAATCACATAC",7,130.51,10.67,-0.09,0.05,2.88,1.07,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","AACATGAATCCACTTA",3,73.08,7.02,-3.74,0.47,1.5,1.26,0.04,">1 nonsynonymous","G86D L131P",2
"lib1","SARS-CoV-2","AACATGACAACGGCAG",1,38.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I I88T L95R F156K Q176L",5
"lib1","SARS-CoV-2","AACATGACAAGTTCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* C102S N120R L131S",4
"lib1","SARS-CoV-2","AACATGACATAACGCA",2,89.36,10.57,-0.2,0.03,2.88,1.04,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","AACATGACATAACGGG",1,42.19,8.48,-2.28,0.23,1.81,1.18,0.02,">1 nonsynonymous","N13S D90S Q168L",3
"lib1","SARS-CoV-2","AACATGACATGACAAC",5,35.31,9.98,-0.78,0.14,2.06,1.03,0.01,">1 nonsynonymous","F99L S164Y",2
"lib1","SARS-CoV-2","AACATGACGAGGTCTG",5,60.2,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W23K Y35P F44S F62L Q79G A89V K128G",7
"lib1","SARS-CoV-2","AACATGACTTGCGCAC",2,10.66,9.76,-1,0.05,2.88,1.01,0,">1 nonsynonymous","D98L Y159H",2
"lib1","SARS-CoV-2","AACATGACTTTAAAAA",2,68.64,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N4V Y39L N120A Q176P",4
"lib1","SARS-CoV-2","AACATGAGAGGGCAAT",1,1.73,NA,NA,NA,NA,NA,NA,"stop","D90G S113* Y165G",3
"lib1","SARS-CoV-2","AACATGATAGACTGTA",1,53.03,10.51,-0.25,0.07,2.94,1.02,0,">1 nonsynonymous","A42I C61P Y143F",3
"lib1","SARS-CoV-2","AACATGATATAATTAG",4,13.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9V T15E G51F A89R K94N T148E",6
"lib1","SARS-CoV-2","AACATGATATATTCAG",8,196.25,9.94,-0.83,0.1,2.14,1.05,0,">1 nonsynonymous","G9S A18M Y35P",3
"lib1","SARS-CoV-2","AACATGCAATACATTT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","D59T N64R F99M I138N Y143M F167*",6
"lib1","SARS-CoV-2","AACATGCAATACTACT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","F44T C61R I80* Q84M G174H",5
"lib1","SARS-CoV-2","AACATGCAGAGTCACA",3,83.17,10.78,0.01,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATGCGCCTTCATC",1,57.44,10.37,-0.39,0.06,2.96,1,0,">1 nonsynonymous","L5N L60H F156R S200L",4
"lib1","SARS-CoV-2","AACATGCGGTAGAGGC",1,5.78,11.16,0.39,0.12,2.99,1,0,">1 nonsynonymous","S36D T55L",2
"lib1","SARS-CoV-2","AACATGCTACCGTAAG",5,16.51,7.26,-3.5,0.37,1.5,1.14,0.05,">1 nonsynonymous","I2K V37N Y50R G83L D112P S139A",6
"lib1","SARS-CoV-2","AACATGCTAGGAATAA",4,106.4,10.05,-0.72,0.04,2.68,1.04,0,">1 nonsynonymous","Y35N I138V Q144S",3
"lib1","SARS-CoV-2","AACATGCTGCCAACAC",2,11.53,10.58,-0.18,0.08,2.9,1.05,0,">1 nonsynonymous","A89T N120E",2
"lib1","SARS-CoV-2","AACATGCTGGATTTAA",11,240.12,10.19,-0.58,0.03,2.89,1.05,0,"1 nonsynonymous","E76W",1
"lib1","SARS-CoV-2","AACATGCTGGTCGGAC",1,22.33,6,-4.76,1.32,1.5,1.18,0.01,">1 nonsynonymous","P96A N171K",2
"lib1","SARS-CoV-2","AACATGCTTTGGAGAA",1,16.61,6.54,-4.22,0.38,2.23,1.11,0.01,">1 nonsynonymous","G86C N151T",2
"lib1","SARS-CoV-2","AACATGGAATCCAAAC",5,58.41,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T3E V11F P149M N157Y",4
"lib1","SARS-CoV-2","AACATGGATATGCAGT",2,18.81,10.79,0.03,0.09,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATGGATCTCTCGT",1,17.95,10.78,0.01,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATGGGCACTTGCA",4,35.17,8.32,-2.44,0.14,2.59,1.06,0.01,">1 nonsynonymous","N64K Y175S",2
"lib1","SARS-CoV-2","AACATGGTAAACCAAA",2,23.32,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S36E D68R E135Q",3
"lib1","SARS-CoV-2","AACATGTAAAGGGGGC",3,80.82,8.86,-1.91,0.26,1.5,1,0.03,">1 nonsynonymous","A14D L60K L122A V173S",4
"lib1","SARS-CoV-2","AACATGTAAGACCTTA",3,114.55,10.74,-0.03,0.06,2.93,1.04,0,"1 nonsynonymous","N4A",1
"lib1","SARS-CoV-2","AACATGTAATTATTAA",2,66.42,6,-4.76,1.02,1.5,1.16,0.01,">1 nonsynonymous","V32T L111G L162P",3
"lib1","SARS-CoV-2","AACATGTAATTCCACC",7,1.38,NA,NA,NA,NA,NA,NA,"stop","F8P C150* F167P",3
"lib1","SARS-CoV-2","AACATGTCAAAGTATT",2,42.12,8.89,-1.87,0.16,1.76,1.19,0.01,">1 nonsynonymous","V37A K56G G86H",3
"lib1","SARS-CoV-2","AACATGTCCCCATTGC",7,139.85,10.56,-0.2,0.04,2.9,1.04,0,"1 nonsynonymous","A89P",1
"lib1","SARS-CoV-2","AACATGTCCTAAGAAG",3,105.65,10.62,-0.14,0.03,2.88,1.03,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","AACATGTCGCAAAAAG",4,28.09,7.04,-3.72,0.4,1.5,1.31,0.03,">1 nonsynonymous","S45L E76Y Q163I",3
"lib1","SARS-CoV-2","AACATGTCTTTCCTCT",1,0.8,NA,NA,NA,NA,NA,NA,"stop","N110*",1
"lib1","SARS-CoV-2","AACATGTGCGCTTAAT",3,1.71,NA,NA,NA,NA,NA,NA,"stop","N1C A81Y D98C N157*",4
"lib1","SARS-CoV-2","AACATGTTCGACCCTT",3,14.93,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S29E Y91D D98P",3
"lib1","SARS-CoV-2","AACATGTTTCAGATTT",2,15.6,6.72,-4.05,1.98,1.5,1.11,0.01,">1 nonsynonymous","C49N P149K",2
"lib1","SARS-CoV-2","AACATGTTTCATATAG",6,30.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F99L N118Y S129N G152L P161C P169E",6
"lib1","SARS-CoV-2","AACATTAAAGATAGTA",1,6,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S19A T85Y D90N Y123V Y175S",5
"lib1","SARS-CoV-2","AACATTAAATTAGTCT",2,70.78,10.8,0.04,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATTAACGATTTCG",2,58.57,6,-4.76,2,3,1.06,0,">1 nonsynonymous","R25N P96F T148A",3
"lib1","SARS-CoV-2","AACATTAAGACTTTTA",11,53.59,6.22,-4.55,0.57,1.5,1.14,0.02,">1 nonsynonymous","L131D T140R",2
"lib1","SARS-CoV-2","AACATTAATACAACGA",7,32.35,10.6,-0.17,0.06,2.84,1.09,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","AACATTAATACAGACA",7,54.29,8.75,-2.02,0.18,1.74,1.14,0.01,">1 nonsynonymous","I2S F12D",2
"lib1","SARS-CoV-2","AACATTAATGAACCAA",2,19.42,6,-4.76,2,3,1.35,0.02,">1 nonsynonymous","C49M S69E",2
"lib1","SARS-CoV-2","AACATTACAACTGCAC",1,32.47,9.85,-0.91,0.22,2.26,1.02,0.01,">1 nonsynonymous","T3L L95V Y178S",3
"lib1","SARS-CoV-2","AACATTACCTCCTTAC",3,22.75,9.81,-0.96,0.1,2.67,1.02,0.01,">1 nonsynonymous","F44P K87R G152L",3
"lib1","SARS-CoV-2","AACATTACGAACTTGA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","N157P Y175*",2
"lib1","SARS-CoV-2","AACATTACGGAAAAAC",3,33.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D112T F134S G174I",3
"lib1","SARS-CoV-2","AACATTACGTACTCCA",2,32.16,9.09,-1.68,0.22,1.74,1.13,0.02,">1 nonsynonymous","N40T A81L P149Q",3
"lib1","SARS-CoV-2","AACATTACTCTTTGAA",8,2.94,NA,NA,NA,NA,NA,NA,"stop","S43Y E154*",2
"lib1","SARS-CoV-2","AACATTACTTCTTGAG",3,43.82,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I2D W106T L122P S184T",4
"lib1","SARS-CoV-2","AACATTAGATTGCCAG",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54N F62P Y93T",3
"lib1","SARS-CoV-2","AACATTATCCTTCACG",2,48.24,9.28,-1.48,0.09,2.83,1.11,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","AACATTATCTAGAGGG",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116M I138P",2
"lib1","SARS-CoV-2","AACATTATGATTTCAA",2,9.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N N120Y",2
"lib1","SARS-CoV-2","AACATTATTCCTCCCT",2,5.49,6.57,-4.19,2,3,1.21,0.01,">1 nonsynonymous","N13R V32M R127I",3
"lib1","SARS-CoV-2","AACATTATTTAAACCA",3,19.05,6,-4.76,1.22,2.81,1.1,0,">1 nonsynonymous","T3D S19R A81S A145S G152L",5
"lib1","SARS-CoV-2","AACATTCAAGAGTAAC",4,12.79,6,-4.76,1.92,3,1.08,0.03,">1 nonsynonymous","S41L T100P D112V",3
"lib1","SARS-CoV-2","AACATTCACCATTAGC",8,182.49,10.8,0.04,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATTCACTTCAAGA",2,9.35,8.37,-2.39,0.18,2.73,1,0.02,">1 nonsynonymous","C61M S113N",2
"lib1","SARS-CoV-2","AACATTCAGGAATGAG",7,73.09,9.06,-1.71,0.19,1.83,1.16,0.01,"1 nonsynonymous","Y91D",1
"lib1","SARS-CoV-2","AACATTCCACTTACAA",4,0.55,NA,NA,NA,NA,NA,NA,"stop","F47E P82* P149L S184A",4
"lib1","SARS-CoV-2","AACATTCCCTACAACT",2,70.44,10.46,-0.31,0.09,2.73,1,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","AACATTCCGCAAAATT",2,111.01,8.54,-2.23,0.1,2.67,1.08,0,">1 nonsynonymous","G155F N171E",2
"lib1","SARS-CoV-2","AACATTCCTAACATGT",10,2351.58,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S19P R27H A105L V115W G174D",5
"lib1","SARS-CoV-2","AACATTCGCTAGCGAA",4,137.29,9.99,-0.78,0.09,2.45,1.05,0,">1 nonsynonymous","V32M N110Y Y178S",3
"lib1","SARS-CoV-2","AACATTCGTAAATACC",3,8.26,NA,NA,NA,NA,NA,NA,"stop","G9A S45K K94* G101F",4
"lib1","SARS-CoV-2","AACATTCTACATACAT",5,79.95,9.03,-1.74,0.15,1.5,1.04,0.01,"1 nonsynonymous","F134P",1
"lib1","SARS-CoV-2","AACATTCTAGCCTATA",7,31.37,6,-4.76,0.65,1.5,1.11,0.01,">1 nonsynonymous","A14D S41P C49Q P82S K87M P149R",6
"lib1","SARS-CoV-2","AACATTCTCCTGCTAA",4,7.85,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5N K56W A89F T100I",4
"lib1","SARS-CoV-2","AACATTCTGCCTCGAA",3,20.54,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","S41I P161I",2
"lib1","SARS-CoV-2","AACATTCTTATTAGGA",2,11.04,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","K26W N40A G86T A105M",4
"lib1","SARS-CoV-2","AACATTGAAAAGGAGC",4,40.18,10.73,-0.03,0.08,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACATTGAAAGTACCG",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H L111W",2
"lib1","SARS-CoV-2","AACATTGAACAATGAA",2,15.79,7.09,-3.68,0.43,1.5,1,0.06,">1 nonsynonymous","S108F Y175S",2
"lib1","SARS-CoV-2","AACATTGAATGATAAT",2,26.08,10.49,-0.28,0.05,2.97,1,0,"1 nonsynonymous","F156P",1
"lib1","SARS-CoV-2","AACATTGAATTTTGCT",7,99.99,10.69,-0.07,0.04,2.98,1,0,">1 nonsynonymous","A42V E141R",2
"lib1","SARS-CoV-2","AACATTGACCTTACCC",10,86.77,6,-4.76,0.82,1.5,1.17,0.01,">1 nonsynonymous","K87T N92V",2
"lib1","SARS-CoV-2","AACATTGACGGCCATT",4,42.11,9.94,-0.82,0.04,2.84,1.05,0,">1 nonsynonymous","S45E N118T",2
"lib1","SARS-CoV-2","AACATTGACTAACATC",4,38.01,7.42,-3.35,0.35,1.5,1,0.05,">1 nonsynonymous","V37R G116A F156Y Q176R",4
"lib1","SARS-CoV-2","AACATTGCCGGTTCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S45V L95R",3
"lib1","SARS-CoV-2","AACATTGGAACCTGAT",1,1.48,NA,NA,NA,NA,NA,NA,"stop","I28M S36G G74C G174* T201R",5
"lib1","SARS-CoV-2","AACATTGGCTTAAATA",7,75.73,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","W106S N118F",2
"lib1","SARS-CoV-2","AACATTGTAATAAGGT",5,150.07,9.62,-1.15,0.04,2.89,1.09,0,">1 nonsynonymous","Y39L T170E",2
"lib1","SARS-CoV-2","AACATTGTACGAATAG",1,26.74,9.73,-1.03,0.15,2.49,1.09,0.01,">1 nonsynonymous","Y39C G152I",2
"lib1","SARS-CoV-2","AACATTTAAAACCTGT",2,13.17,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","I88P",1
"lib1","SARS-CoV-2","AACATTTAAAATAGTG",11,7.49,NA,NA,NA,NA,NA,NA,"stop","A18* P169L C195R",3
"lib1","SARS-CoV-2","AACATTTACGCAGTTG",5,89.71,10.78,0.02,0.06,2.91,1.03,0,">1 nonsynonymous","Y39L C61E",2
"lib1","SARS-CoV-2","AACATTTATATAATCC",11,37.1,9.66,-1.11,0.13,1.97,1.11,0.01,">1 nonsynonymous","T15F A67V S129D V173C",4
"lib1","SARS-CoV-2","AACATTTCAAACCTTG",3,5.41,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S41N G51I V103L E141W",4
"lib1","SARS-CoV-2","AACATTTCCGACAGAT",5,33.93,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","S19E R25V D34G A67C D97N",5
"lib1","SARS-CoV-2","AACATTTCGAGTTATG",2,18.02,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I28L C61S I88N V103P",4
"lib1","SARS-CoV-2","AACATTTCTCAATAAC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACCAAAAAACCGCCA",2,5.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88F F99T W106S N157R",4
"lib1","SARS-CoV-2","AACCAAAAAATGAACG",3,27.6,10.91,0.15,0.08,2.86,1.05,0,"1 nonsynonymous","I138K",1
"lib1","SARS-CoV-2","AACCAAAAATAAGGTG",2,90.84,10.5,-0.27,0.04,2.81,1.11,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","AACCAAAAATCGGTTC",6,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R I72Q K132F H189S",4
"lib1","SARS-CoV-2","AACCAAAAATGTTATT",23,126.29,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N1P S19K D90Y T140L V173A",5
"lib1","SARS-CoV-2","AACCAAAAATTTAGAC",1,6.26,10.92,0.16,0.1,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAAAACACGCTTA",9,151.49,10.6,-0.17,0.06,2.88,1.06,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","AACCAAAACAGAATTC",5,106.97,10.51,-0.25,0.03,2.97,1,0,"1 nonsynonymous","K87V",1
"lib1","SARS-CoV-2","AACCAAAACCTATACG",7,60.53,6.38,-4.38,0.5,1.5,1.2,0.02,">1 nonsynonymous","S129P E135R G155R",3
"lib1","SARS-CoV-2","AACCAAAAGACGATTA",3,5.51,NA,NA,NA,NA,NA,NA,"stop","V52H D59R E76V D137*",4
"lib1","SARS-CoV-2","AACCAAAAGATAGAAT",4,67.75,10.06,-0.71,0.08,2.56,1.07,0,">1 nonsynonymous","T3A Y121N",2
"lib1","SARS-CoV-2","AACCAAAATAATGGTT",8,154.88,10.75,-0.02,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAAAATCAATCTA",4,72.74,8.69,-2.08,0.08,2.78,1.14,0,">1 nonsynonymous","F44D G166M",2
"lib1","SARS-CoV-2","AACCAAAATGCACATT",2,9.83,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N157R C158Y V180S P197L",4
"lib1","SARS-CoV-2","AACCAAAATGCCTTTA",7,64.01,9.42,-1.35,0.18,1.6,1.15,0.01,">1 nonsynonymous","L38S T46L F160G",3
"lib1","SARS-CoV-2","AACCAAACAAGGAGGG",7,54.78,6.61,-4.15,0.6,1.5,1.29,0.05,">1 nonsynonymous","L5C S43P G83S F134V",4
"lib1","SARS-CoV-2","AACCAAACAATAAGCT",2,32.63,10.68,-0.08,0.06,2.84,1.08,0,">1 nonsynonymous","D90T S147P",2
"lib1","SARS-CoV-2","AACCAAACACCACCAT",13,158.79,8.17,-2.59,0.17,1.78,1.14,0.01,">1 nonsynonymous","C49I I138L F156E",3
"lib1","SARS-CoV-2","AACCAAACACTGTCTT",2,21.45,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","V37L I72K",2
"lib1","SARS-CoV-2","AACCAAACATAGGAGC",1,720.23,9.59,-1.17,0.05,2.84,1.02,0,"1 nonsynonymous","R73P",1
"lib1","SARS-CoV-2","AACCAAACATGTCCGA",5,39.27,6,-4.76,1.55,1.5,1.13,0.01,">1 nonsynonymous","V11R Y123L S147I F185N K198T",5
"lib1","SARS-CoV-2","AACCAAACCAAGGACA",2,42.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38T C158G",2
"lib1","SARS-CoV-2","AACCAAACCAGCATTG",3,40.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A22S N40F I72W D90L",4
"lib1","SARS-CoV-2","AACCAAACCGCGCAAA",5,44.52,9.48,-1.29,0.07,2.86,1.06,0,">1 nonsynonymous","G116P T170N",2
"lib1","SARS-CoV-2","AACCAAACTAATAAAT",3,1.02,NA,NA,NA,NA,NA,NA,"stop","D97H Y121*",2
"lib1","SARS-CoV-2","AACCAAACTCAAAATA",5,113.46,10.76,-0.01,0.04,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAAACTGAAATTA",2,13.9,6.45,-4.32,0.76,1.5,1.11,0.04,">1 nonsynonymous","C61A R124W I142N T148N",4
"lib1","SARS-CoV-2","AACCAAAGAAGAATAA",5,80.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23A S129P Y159Q",3
"lib1","SARS-CoV-2","AACCAAAGACAGAACG",9,1.77,NA,NA,NA,NA,NA,NA,"stop","V77* D97Y K114N G152S G166E",5
"lib1","SARS-CoV-2","AACCAAAGATACTCAA",7,64.52,10.78,0.01,0.07,2.85,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCAAAGCAGGCGAA",1,31.57,10.77,0,0.09,2.81,1.14,0,">1 nonsynonymous","V37A S139K",2
"lib1","SARS-CoV-2","AACCAAAGCGACACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A22N S45* A105C P133R G172P",5
"lib1","SARS-CoV-2","AACCAAAGCGACCAGC",9,66.59,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C49H L60P P177K",3
"lib1","SARS-CoV-2","AACCAAAGGAGAAGCG",4,9.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K94L V103L S108V G172Y A190V G196R",6
"lib1","SARS-CoV-2","AACCAAATAAACGAAG",1,54.74,6.69,-4.07,0.41,1.5,1.18,0.03,">1 nonsynonymous","N107M Y123L F160V",3
"lib1","SARS-CoV-2","AACCAAATAATCATCG",4,27.35,10.79,0.03,0.09,2.92,1.08,0.01,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","AACCAAATACAGTATA",6,44.26,9.26,-1.5,0.24,1.5,1.19,0.02,">1 nonsynonymous","T3Q F8L P82A",3
"lib1","SARS-CoV-2","AACCAAATATAAACAT",4,20.75,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K87E T140L F167L",3
"lib1","SARS-CoV-2","AACCAAATATTGTATC",5,18.72,9.75,-1.02,0.16,1.76,1.11,0.01,">1 nonsynonymous","V11T F185I",2
"lib1","SARS-CoV-2","AACCAAATGGGTGTGC",3,19.98,10.68,-0.09,0.07,2.97,1,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","AACCAAATTGATAGTA",1,6.63,10.51,-0.26,0.2,2.86,1.21,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACCAAATTTGTAACC",2,9.15,10.81,0.04,0.08,2.93,1.02,0,"1 nonsynonymous","Y91F",1
"lib1","SARS-CoV-2","AACCAACACATTGAAG",3,14.48,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F70L V77M",2
"lib1","SARS-CoV-2","AACCAACACCTAAGGT",3,16.51,6,-4.76,2,3,1.22,0.04,">1 nonsynonymous","S45I K56S P82L A105I",4
"lib1","SARS-CoV-2","AACCAACAGTGGCAAT",5,49.38,10.75,-0.01,0.06,2.94,1.01,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","AACCAACATAGAGAAC",3,46.42,10.63,-0.13,0.05,2.95,1,0,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","AACCAACATCATTCTA",1,102.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P133T I142W Q176E",3
"lib1","SARS-CoV-2","AACCAACATCCCTTCA",2,24.46,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I104N C158I",2
"lib1","SARS-CoV-2","AACCAACCATAACATA",1,18.94,10.8,0.03,0.15,2.48,1,0.01,">1 nonsynonymous","N40R Q168S",2
"lib1","SARS-CoV-2","AACCAACCGATAAGGG",4,71.46,10.11,-0.65,0.09,2.62,1.02,0,">1 nonsynonymous","T55N R127H",2
"lib1","SARS-CoV-2","AACCAACCGCGCACCT",11,4.66,NA,NA,NA,NA,NA,NA,"stop","G9M F185*",2
"lib1","SARS-CoV-2","AACCAACCGGACTCCC",9,102.25,10.62,-0.14,0.05,2.95,1,0,"1 nonsynonymous","P7M",1
"lib1","SARS-CoV-2","AACCAACCTGACGCGT",10,95.33,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","G51E D59W Q176L H189Y",4
"lib1","SARS-CoV-2","AACCAACGACCTAAAA",3,44.95,10.32,-0.45,0.09,2.9,1,0,"1 nonsynonymous","G51A",1
"lib1","SARS-CoV-2","AACCAACGCCATTACC",5,14.25,10.29,-0.48,0.08,2.77,1.02,0,"1 nonsynonymous","P133Y",1
"lib1","SARS-CoV-2","AACCAACTAAATCAAG",2,1.05,NA,NA,NA,NA,NA,NA,"stop","T100A D137R E154T G174* R179S",5
"lib1","SARS-CoV-2","AACCAAGAACTGAGAT",2,48.7,10.69,-0.08,0.08,2.87,1.1,0,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","AACCAAGACATTAAAC",3,47.23,9.62,-1.14,0.1,2.14,1.11,0,">1 nonsynonymous","Y39R E135W P149T",3
"lib1","SARS-CoV-2","AACCAAGAGAACTCGA",2,26.12,6,-4.76,2,3,1.21,0,">1 nonsynonymous","L57R S113L T148H",3
"lib1","SARS-CoV-2","AACCAAGAGACCCTAA",2,52.42,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I88T F99I K128C K199M",4
"lib1","SARS-CoV-2","AACCAAGAGGACCTCA",3,48.22,10.76,0,0.05,2.93,1.06,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","AACCAAGAGTGCCACT",4,47.66,10.07,-0.7,0.1,2.74,1.02,0,">1 nonsynonymous","A18M L60A N151R",3
"lib1","SARS-CoV-2","AACCAAGCCGTACGCA",2,56.69,10.68,-0.08,0.05,2.84,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCAAGGAGAAGTCA",1,42.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S41L D90G K128L P161V S164F Y178L",6
"lib1","SARS-CoV-2","AACCAAGGTGAAATAC",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R C61L F99P F156L",4
"lib1","SARS-CoV-2","AACCAAGTCTTATCGC",8,119.93,6,-4.76,0.96,1.5,1.16,0.01,">1 nonsynonymous","C49T K56V F62H G155R L183V T201D",6
"lib1","SARS-CoV-2","AACCAAGTGATCAAAG",3,121.89,9.25,-1.51,0.06,2.86,1.1,0,">1 nonsynonymous","L5V E154Y",2
"lib1","SARS-CoV-2","AACCAAGTTATGGTAC",4,30.13,9.9,-0.87,0.14,2.73,1.07,0.01,">1 nonsynonymous","T3S A33M Y143L",3
"lib1","SARS-CoV-2","AACCAATAAATGCTGC",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105P N118F",2
"lib1","SARS-CoV-2","AACCAATAACCTTACA",3,1.34,NA,NA,NA,NA,NA,NA,"stop","S41H Y66* S113V L131G C158R",5
"lib1","SARS-CoV-2","AACCAATACCAAGTAA",1,13.58,10.24,-0.52,0.15,2.92,1,0.01,">1 nonsynonymous","S41C S147F",2
"lib1","SARS-CoV-2","AACCAATACCCCTCCA",2,23,6.91,-3.85,0.48,1.5,1.24,0.06,">1 nonsynonymous","S36R F47G Y91V L162S",4
"lib1","SARS-CoV-2","AACCAATACTGACAAC",6,27.09,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S45I I88K",2
"lib1","SARS-CoV-2","AACCAATATAATTAAA",1,12.07,11,0.24,0.12,2.94,1.01,0,">1 nonsynonymous","S53A N171T",2
"lib1","SARS-CoV-2","AACCAATATTTTGATC",6,0.84,NA,NA,NA,NA,NA,NA,"stop","Y66* K132T E154K",3
"lib1","SARS-CoV-2","AACCAATCAATAAACT",2,30.88,9.5,-1.26,0.19,1.61,1.11,0.01,">1 nonsynonymous","P96M N120R",2
"lib1","SARS-CoV-2","AACCAATCGAAGTAAT",5,96.65,10.81,0.05,0.07,2.9,1.04,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","AACCAATCTACATAAT",14,5.21,NA,NA,NA,NA,NA,NA,"stop","P7V L162* G174A",3
"lib1","SARS-CoV-2","AACCAATCTACCAATG",3,102.48,10.68,-0.08,0.05,2.94,1.04,0,"1 nonsynonymous","D90E",1
"lib1","SARS-CoV-2","AACCAATTGTACGGGG",4,83.78,9.81,-0.95,0.11,2,1.08,0.01,">1 nonsynonymous","P7Y A18R S41K",3
"lib1","SARS-CoV-2","AACCAATTTAGTAACG",5,46.12,7.6,-3.17,0.42,1.5,1.1,0.06,">1 nonsynonymous","C61S Q84L G146L G166F",4
"lib1","SARS-CoV-2","AACCAATTTTCTCTAG",3,30.43,10.62,-0.15,0.06,2.81,1.05,0,">1 nonsynonymous","A33L P54G",2
"lib1","SARS-CoV-2","AACCACAAAAATAACA",3,22.07,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I104A D137L",2
"lib1","SARS-CoV-2","AACCACAAAGTATAAA",1,1.38,NA,NA,NA,NA,NA,NA,"stop","S53* L162R Q176S",3
"lib1","SARS-CoV-2","AACCACAATACAATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* S45K T201N",3
"lib1","SARS-CoV-2","AACCACAATAGTACCT",2,43.42,10.03,-0.73,0.11,2.56,1.03,0,">1 nonsynonymous","K56S F70M T148S",3
"lib1","SARS-CoV-2","AACCACAATCGATGAC",8,122.9,8.53,-2.24,0.13,1.58,1.14,0.01,">1 nonsynonymous","I2Q V37R K48D Y121V N151F",5
"lib1","SARS-CoV-2","AACCACACAAGATAAG",1,9.52,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","K94V Q168P",2
"lib1","SARS-CoV-2","AACCACACAAGGAGAC",3,60.38,10.8,0.03,0.05,2.92,1.05,0,"1 nonsynonymous","N24T",1
"lib1","SARS-CoV-2","AACCACACGGACTTTA",3,44.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N118K C150G",2
"lib1","SARS-CoV-2","AACCACAGATCCAAAC",4,46.1,8.36,-2.41,0.25,2.02,1.14,0.02,">1 nonsynonymous","N4T G9M Y35T Y119L",4
"lib1","SARS-CoV-2","AACCACAGCAAGACGA",4,31.14,10.49,-0.27,0.06,2.96,1,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","AACCACAGCTCTTATT",1,6.48,9.83,-0.93,0.2,2.23,1.07,0.01,"1 nonsynonymous","G51F",1
"lib1","SARS-CoV-2","AACCACAGGCTATCCA",1,11.71,10.56,-0.21,0.07,2.9,1,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","AACCACAGGGTATTGC",3,16.16,10.31,-0.46,0.11,2.67,1.01,0,">1 nonsynonymous","D59H K132A G152Y",3
"lib1","SARS-CoV-2","AACCACATCTAAAAAG",1,21.32,6.2,-4.57,0.54,1.5,1.11,0.01,">1 nonsynonymous","K87Y R124F P169H",3
"lib1","SARS-CoV-2","AACCACATGGCCTTTA",4,20.9,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","A89Y T100L W106D S139E G166F",5
"lib1","SARS-CoV-2","AACCACCAAGCAATAA",2,69.21,10.52,-0.24,0.06,2.98,1,0,">1 nonsynonymous","N64T K87L",2
"lib1","SARS-CoV-2","AACCACCACCCTTAGC",2,16.83,10.77,0.01,0.08,2.94,1.03,0,">1 nonsynonymous","G83R E141S",2
"lib1","SARS-CoV-2","AACCACCATGTTATGA",5,26.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y D98A W106D D112W Y121M",5
"lib1","SARS-CoV-2","AACCACCCCGTGCGGC",7,114.99,10.85,0.09,0.08,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCACCGCCCAAGGT",2,32.31,9.96,-0.8,0.1,2.75,1.04,0,">1 nonsynonymous","T15G S53C",2
"lib1","SARS-CoV-2","AACCACCGCGGGACAG",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F T46N G83T K128L",4
"lib1","SARS-CoV-2","AACCACCGTTGCACTA",2,29.84,10.79,0.02,0.05,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCACGAAAACAACT",4,33.67,10.5,-0.26,0.2,2.46,1.17,0.01,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","AACCACGACTAAAAAG",8,6.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G G116I R124H Y175A S200R",5
"lib1","SARS-CoV-2","AACCACGATACAATCC",3,0.78,NA,NA,NA,NA,NA,NA,"stop","F99T R127L F167H K198*",4
"lib1","SARS-CoV-2","AACCACGATAGAGAAT",8,91.05,10.83,0.06,0.07,2.94,1.04,0,">1 nonsynonymous","N40R S129Q E154S K199R",4
"lib1","SARS-CoV-2","AACCACGATTATTACG",10,6.08,NA,NA,NA,NA,NA,NA,"stop","S45G C49*",2
"lib1","SARS-CoV-2","AACCACGATTCGGCCA",2,19.29,6.02,-4.74,1.11,1.5,1.11,0.02,">1 nonsynonymous","N1P R16F D98S G172C",4
"lib1","SARS-CoV-2","AACCACGCAAATCCGT",1,65.85,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I138G R179W",2
"lib1","SARS-CoV-2","AACCACGCAATACGCG",5,42.35,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T46A N64S N107F F126A",4
"lib1","SARS-CoV-2","AACCACGCTCTAAACA",2,24.9,7.67,-3.09,0.33,1.5,1.26,0.04,">1 nonsynonymous","C6Y A42S V52L Q84T K132S I138S A190V",7
"lib1","SARS-CoV-2","AACCACGTTGCCCGGT",4,198.12,10.44,-0.33,0.04,2.91,1.03,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","AACCACTAAAGAATAT",4,22.78,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6W Q144L N151T",3
"lib1","SARS-CoV-2","AACCACTAATCTGTTC",2,15.2,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","I88D G146R",2
"lib1","SARS-CoV-2","AACCACTAGAAACGCT",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R D90F A145V L188H",4
"lib1","SARS-CoV-2","AACCACTCAAAAATCA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib1","SARS-CoV-2","AACCACTCAAGAGGTG",4,34.9,6,-4.76,1.44,1.5,1.18,0.01,"1 nonsynonymous","V180K",1
"lib1","SARS-CoV-2","AACCACTGACCACCAT",2,9.41,10.82,0.05,0.09,3,1,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","AACCACTGACGCTAAC",1,23.94,10.76,0,0.08,2.94,1,0,"1 nonsynonymous","F160V",1
"lib1","SARS-CoV-2","AACCACTGGACACAAA",3,19.65,9.13,-1.63,0.2,1.73,1.21,0.02,">1 nonsynonymous","L38P F62H T201R",3
"lib1","SARS-CoV-2","AACCACTTAAAGTACG",4,133.61,9.94,-0.83,0.05,2.88,1.04,0,"1 nonsynonymous","Y119K",1
"lib1","SARS-CoV-2","AACCACTTAGACATAG",4,36.81,6.42,-4.34,0.52,1.5,1.16,0.02,">1 nonsynonymous","R25T K114M R127S I142L R179D",5
"lib1","SARS-CoV-2","AACCACTTCAACGATA",2,10.02,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L95T V103W",2
"lib1","SARS-CoV-2","AACCACTTCCAAAGGA",2,25.31,9.99,-0.78,0.1,2.11,1.02,0,">1 nonsynonymous","G116P P133N",2
"lib1","SARS-CoV-2","AACCACTTTGGTATCT",3,14.82,8.71,-2.05,0.25,1.76,1.26,0.04,">1 nonsynonymous","W106S E141I",2
"lib1","SARS-CoV-2","AACCACTTTGTGAAGG",1,7,6.76,-4,0.33,3,1.18,0.01,">1 nonsynonymous","N40V I104G",2
"lib1","SARS-CoV-2","AACCAGAAACTTGAAG",7,118.15,10.07,-0.7,0.08,2.57,1.06,0,">1 nonsynonymous","I2G Y39P D90A E141K",4
"lib1","SARS-CoV-2","AACCAGAAGGCTTAAA",7,66.75,10.75,-0.01,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAGAATATTTAAT",3,35.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N58C A89C W106R",3
"lib1","SARS-CoV-2","AACCAGAATGCATAGC",1,30.71,10.03,-0.73,0.08,2.7,1.03,0,">1 nonsynonymous","G9S F44E F126L",3
"lib1","SARS-CoV-2","AACCAGACAATGTGAT",3,0.16,NA,NA,NA,NA,NA,NA,"stop","A14C V37K C49* Q79* G86V E141S E186Q",7
"lib1","SARS-CoV-2","AACCAGACAGTGCTTT",11,204.28,9.79,-0.97,0.04,2.87,1.07,0,"1 nonsynonymous","T170F",1
"lib1","SARS-CoV-2","AACCAGACCGACTCAT",4,5.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A F47R D98A V103N N157P F167P T201Y",7
"lib1","SARS-CoV-2","AACCAGAGAGTAAAAA",4,63.37,10.55,-0.21,0.04,2.92,1.01,0,">1 nonsynonymous","L5N P96G",2
"lib1","SARS-CoV-2","AACCAGAGGTGAATGG",1,8.89,7.92,-2.84,0.3,1.83,1.13,0.04,">1 nonsynonymous","S41L I80L T85S N157Q",4
"lib1","SARS-CoV-2","AACCAGAGTTCGCGGA",2,32.27,10.52,-0.24,0.08,2.8,1.18,0,">1 nonsynonymous","L122S K128C G174Q P197M",4
"lib1","SARS-CoV-2","AACCAGATAGCTGAAC",8,60.81,10.69,-0.08,0.07,2.89,1.08,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","AACCAGATCACCGGTT",2,35.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11N R27L S36R F99N S129N G155T",6
"lib1","SARS-CoV-2","AACCAGATCATCTATG",3,0.6,NA,NA,NA,NA,NA,NA,"stop","V52Q S129L R136*",3
"lib1","SARS-CoV-2","AACCAGATCTAATACT",1,14.39,9.28,-1.49,0.19,2.42,1.04,0.02,">1 nonsynonymous","R73Q D98L K132R",3
"lib1","SARS-CoV-2","AACCAGATGACTAGTT",5,3.06,NA,NA,NA,NA,NA,NA,"stop","F47L A105* K128I T140S",4
"lib1","SARS-CoV-2","AACCAGATGTCAATAC",6,0.48,NA,NA,NA,NA,NA,NA,"stop","G51S L122*",2
"lib1","SARS-CoV-2","AACCAGCACAGAAGGA",1,19.41,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","Y50R I80S T85A N120S",4
"lib1","SARS-CoV-2","AACCAGCACGCGGCCC",5,50.07,10.65,-0.11,0.05,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAGCAGGTTAAGA",1,23.87,10.89,0.13,0.09,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCAGCCGATCTTAA",6,110.66,9.86,-0.91,0.05,2.8,1.06,0,">1 nonsynonymous","R73T G196V",2
"lib1","SARS-CoV-2","AACCAGCGTATTGATC",1,8.23,10.56,-0.21,0.09,2.93,1.01,0,">1 nonsynonymous","L5F T100K P149C",3
"lib1","SARS-CoV-2","AACCAGCTATACTTAT",8,0.24,NA,NA,NA,NA,NA,NA,"stop","E135Y P169*",2
"lib1","SARS-CoV-2","AACCAGGACACCCTAC",11,74.79,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64P G83S I142A L162R",4
"lib1","SARS-CoV-2","AACCAGGCATTTCGCA",2,87.91,10.13,-0.63,0.08,2.54,1.04,0,">1 nonsynonymous","K56V Y91I",2
"lib1","SARS-CoV-2","AACCAGGGAGAGGAGG",6,39.57,6.34,-4.42,0.44,1.5,1.18,0.01,">1 nonsynonymous","N4S Y66G R78L K94E F99Y A105N E135I I142S L188T",9
"lib1","SARS-CoV-2","AACCAGGGGATTGAGT",1,6.23,8.59,-2.17,0.47,1.5,1,0.04,">1 nonsynonymous","D112L T148D V173N",3
"lib1","SARS-CoV-2","AACCAGGGTGCCACTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H T100I",2
"lib1","SARS-CoV-2","AACCAGGTATGGTAAA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","S19* S69R P177A",3
"lib1","SARS-CoV-2","AACCAGGTCGAAGTAG",8,39.86,6.21,-4.56,0.57,2.1,1.23,0.01,">1 nonsynonymous","A89E G146K",2
"lib1","SARS-CoV-2","AACCAGGTTGGAATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17L D68I T100* F126V G166V Q176V",6
"lib1","SARS-CoV-2","AACCAGGTTTAGGTAA",1,7.84,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D98R C150S",2
"lib1","SARS-CoV-2","AACCAGTAACCTCCGG",5,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S D90P G116M R127M E154F",5
"lib1","SARS-CoV-2","AACCAGTATTGGCTGG",2,35.6,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S29N Q79G R124N",3
"lib1","SARS-CoV-2","AACCAGTGAATAGTAG",2,16.86,8.97,-1.79,0.22,2.35,1.3,0.02,">1 nonsynonymous","A42S K56M E141G P161G",4
"lib1","SARS-CoV-2","AACCAGTGATCCACAG",5,51.42,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A22G L95T T100F N118C V173R",5
"lib1","SARS-CoV-2","AACCAGTGCGGCAACG",6,20.1,6,-4.76,2,3,1.2,0,"1 nonsynonymous","I88W",1
"lib1","SARS-CoV-2","AACCAGTTCTTTAAAG",1,52.03,6.16,-4.6,0.6,1.5,1.16,0.01,">1 nonsynonymous","L5W S69R N107S Y119T",4
"lib1","SARS-CoV-2","AACCATAAAAAAAAAG",7,160.47,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N107R N118G P161C P177F",4
"lib1","SARS-CoV-2","AACCATAAAACTATTT",2,22.73,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","L60K G86K N110A",3
"lib1","SARS-CoV-2","AACCATAACCCAGTCA",2,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H D34R D75V I104Y S113A",5
"lib1","SARS-CoV-2","AACCATAAGCACAGTA",2,65.6,9.16,-1.6,0.06,2.86,1.09,0,"1 nonsynonymous","G117F",1
"lib1","SARS-CoV-2","AACCATAATGAGGGTG",1,11.68,10.68,-0.09,0.16,2.85,1.06,0.01,">1 nonsynonymous","N120S F160W",2
"lib1","SARS-CoV-2","AACCATACAGGCGACT",3,2.01,NA,NA,NA,NA,NA,NA,"stop","S36E F62K A105*",3
"lib1","SARS-CoV-2","AACCATACATAGCTAA",1,16.65,9.81,-0.95,0.24,2.49,1.1,0.01,">1 nonsynonymous","C6M K114R",2
"lib1","SARS-CoV-2","AACCATACATCTCCAC",2,38.45,9.79,-0.97,0.09,2.01,1.08,0.01,">1 nonsynonymous","K26A P96T",2
"lib1","SARS-CoV-2","AACCATACCACGGAAT",13,79.85,6,-4.76,1.76,1.5,1.18,0.02,">1 nonsynonymous","G86D R124E I142K Q168V",4
"lib1","SARS-CoV-2","AACCATACCCTACCAT",4,0.83,NA,NA,NA,NA,NA,NA,"stop","G116L C195*",2
"lib1","SARS-CoV-2","AACCATAGAAACTGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y A42L P82L L122A Q144V",5
"lib1","SARS-CoV-2","AACCATAGCCAAGTGC",7,186.19,8.4,-2.37,0.1,2.15,1.1,0,">1 nonsynonymous","T85F D98S G152D P169E",4
"lib1","SARS-CoV-2","AACCATAGCGCACTGG",1,10.83,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9K R25V Q84I L131S P197T",5
"lib1","SARS-CoV-2","AACCATAGCTCACGTC",1,99.5,10.72,-0.05,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCATAGCTTAAACA",12,153.94,10.38,-0.38,0.05,2.88,1.06,0,">1 nonsynonymous","L60P T201S",2
"lib1","SARS-CoV-2","AACCATAGTAATGTAA",6,18.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","E10G Y93G",2
"lib1","SARS-CoV-2","AACCATAGTACGCATC",3,14.49,10.88,0.12,0.08,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCATAGTACGGATA",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L G166L",2
"lib1","SARS-CoV-2","AACCATATAACGGAGC",3,87.35,10.34,-0.43,0.04,2.91,1,0,">1 nonsynonymous","C61A T85P",2
"lib1","SARS-CoV-2","AACCATATACAATTAG",3,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R F12M N30W P96Y",4
"lib1","SARS-CoV-2","AACCATATCCACATCT",4,22.95,10.7,-0.06,0.08,2.96,1.03,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","AACCATATCCTACCCT",9,82.98,10.72,-0.04,0.05,2.93,1,0,">1 nonsynonymous","K56Q F62S",2
"lib1","SARS-CoV-2","AACCATCAAATGCGTA",1,81.24,10.67,-0.1,0.03,2.93,1.04,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","AACCATCAGATGATTA",3,20.43,10.71,-0.06,0.08,2.87,1.1,0,"1 nonsynonymous","S45G",1
"lib1","SARS-CoV-2","AACCATCAGTACTTAA",10,29.13,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P7D F12S I72F D98G R127S",5
"lib1","SARS-CoV-2","AACCATCATTTTTCTT",1,6.46,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V20I C49P L95A V181R",4
"lib1","SARS-CoV-2","AACCATCCATAGAAAA",2,39.53,9.31,-1.45,0.16,1.81,1.23,0.01,">1 nonsynonymous","F17L T85G",2
"lib1","SARS-CoV-2","AACCATCGCGATTAGG",3,35.42,10.85,0.08,0.08,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCATCGTCTAAATG",10,78.09,9.92,-0.84,0.08,2.63,1.02,0,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","AACCATCTGAAGAGAT",8,10.76,NA,NA,NA,NA,NA,NA,"stop","F8P C49* A81V G146S T201R",5
"lib1","SARS-CoV-2","AACCATGAAACGCAGC",1,7.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I C61D N110W L188W",4
"lib1","SARS-CoV-2","AACCATGAATTGACAA",3,21.73,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","R73E G146V V173G",3
"lib1","SARS-CoV-2","AACCATGAGTAATTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","V32W Y50F K56* Y66L",4
"lib1","SARS-CoV-2","AACCATGCATGGACTG",2,41.93,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88N F134S C195F",3
"lib1","SARS-CoV-2","AACCATGGCTCTTATT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","F17* N30S K56S T63S T100R Y119R N157I",7
"lib1","SARS-CoV-2","AACCATTAAACATACA",4,37.47,6.75,-4.01,0.56,1.5,1.1,0.05,">1 nonsynonymous","A14W N107W S139C Q144S",4
"lib1","SARS-CoV-2","AACCATTAATGAGATA",2,2.51,NA,NA,NA,NA,NA,NA,"stop","Y39* N58K V65F I72A",4
"lib1","SARS-CoV-2","AACCATTACACACAAT",1,23.92,10.29,-0.47,0.1,2.99,1,0,">1 nonsynonymous","E10H V37T T63S R78S V173A",5
"lib1","SARS-CoV-2","AACCATTACCGGTCTC",4,85.41,7.79,-2.97,0.14,1.78,1.09,0.01,">1 nonsynonymous","C6G R73L",2
"lib1","SARS-CoV-2","AACCATTATTCAAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","N120* S139F",2
"lib1","SARS-CoV-2","AACCATTCAATAACTG",2,24.79,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V65F G86C F134A Y165F",4
"lib1","SARS-CoV-2","AACCATTCTAGTAGCT",3,2.24,NA,NA,NA,NA,NA,NA,"stop","R27* C102M",2
"lib1","SARS-CoV-2","AACCATTTATATTCAT",3,24.18,10.91,0.15,0.08,2.89,1.04,0,"1 nonsynonymous","R16H",1
"lib1","SARS-CoV-2","AACCATTTCATTGACC",4,41.48,7.25,-3.52,0.25,1.5,1.12,0.01,">1 nonsynonymous","G9K R25D",2
"lib1","SARS-CoV-2","AACCATTTGAGCTTTC",9,25.18,6,-4.76,0.72,1.5,1.04,0,">1 nonsynonymous","A42C L60P Q84N Y93W",4
"lib1","SARS-CoV-2","AACCCAAAAAAAAAAA",11,100.67,8.84,-1.93,0.05,2.67,1.09,0,"1 nonsynonymous","P161N",1
"lib1","SARS-CoV-2","AACCCAAAAGTTTTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C N92V N130Q",3
"lib1","SARS-CoV-2","AACCCAAACAAAGGAA",4,2.13,NA,NA,NA,NA,NA,NA,"stop","W106K N120T P149*",3
"lib1","SARS-CoV-2","AACCCAAACGTGACGG",1,28.5,10.2,-0.57,0.08,2.89,1,0,">1 nonsynonymous","V37K S43P L60S D90S",4
"lib1","SARS-CoV-2","AACCCAAATACTCGAG",9,95.15,11.07,0.3,0.07,2.9,1.04,0,">1 nonsynonymous","T3P N171F T201R",3
"lib1","SARS-CoV-2","AACCCAAATCGCCATA",3,75.99,8.45,-2.31,0.17,2.8,1.1,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","AACCCAACAGGCACAT",3,126.99,10.75,-0.02,0.05,2.89,1.05,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","AACCCAACCCGGACAT",6,42.38,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","I80K",1
"lib1","SARS-CoV-2","AACCCAACCTAACCAA",1,21.63,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68A Q84K",2
"lib1","SARS-CoV-2","AACCCAAGAACGAAAG",1,16.79,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I2S S43I N58I D98T R136I P161L R179T",7
"lib1","SARS-CoV-2","AACCCAAGGACTCTAA",5,18.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N1M D68G I88R A105S Y165L S184Y",6
"lib1","SARS-CoV-2","AACCCAAGTAACTTCT",3,18.31,10.6,-0.17,0.09,2.73,1.11,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","AACCCAAGTAATGGTG",3,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R L95R",2
"lib1","SARS-CoV-2","AACCCAAGTTAGAATA",6,33.16,10.25,-0.51,0.06,2.97,1,0,">1 nonsynonymous","T3F K48S V115D A190G",4
"lib1","SARS-CoV-2","AACCCAATATAATCTA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88F Y119L L183P K199C",4
"lib1","SARS-CoV-2","AACCCAATATTCTCAA",12,108.85,10.66,-0.11,0.04,2.89,1.05,0,">1 nonsynonymous","D97H P149S",2
"lib1","SARS-CoV-2","AACCCAATTCTATTAC",2,14.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6Y D90R A105P Q176G",4
"lib1","SARS-CoV-2","AACCCACAAGTAACGT",1,5.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10M I104R N120L",3
"lib1","SARS-CoV-2","AACCCACAGACTCCTT",1,9.58,7.02,-3.75,0.49,1.5,1.12,0.08,">1 nonsynonymous","F44I P82A F126L",3
"lib1","SARS-CoV-2","AACCCACAGGACTCCA",1,52.78,6.51,-4.26,0.67,1.5,1.16,0.05,">1 nonsynonymous","I88S Q144P Y159K",3
"lib1","SARS-CoV-2","AACCCACATACGAGTG",1,14.49,9.06,-1.71,0.13,2.78,1.19,0.01,">1 nonsynonymous","I138N T170L",2
"lib1","SARS-CoV-2","AACCCACCACGGCTGA",5,0.85,NA,NA,NA,NA,NA,NA,"stop","G9* P169L",2
"lib1","SARS-CoV-2","AACCCACCCCGCACTG",11,121.54,9.84,-0.92,0.06,2.72,1.08,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","AACCCACTCTGGCTTT",3,1.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105P",1
"lib1","SARS-CoV-2","AACCCACTTTACTGAG",7,112.41,6.79,-3.98,0.39,1.5,1.19,0.03,">1 nonsynonymous","L5F Y143L P177S",3
"lib1","SARS-CoV-2","AACCCAGAAACGTGAT",5,47.29,9.86,-0.91,0.11,2.18,1.04,0.01,">1 nonsynonymous","L57S N151V",2
"lib1","SARS-CoV-2","AACCCAGAATTTGACA",2,34.11,9.92,-0.84,0.13,1.99,1.04,0.01,"1 nonsynonymous","T46P",1
"lib1","SARS-CoV-2","AACCCAGAGCTTAAGC",4,6.47,6,-4.76,2,3,1.11,0.02,">1 nonsynonymous","N130F L183R",2
"lib1","SARS-CoV-2","AACCCAGATCCCCTAG",2,15.31,9.71,-1.06,0.18,2.59,1.14,0.01,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","AACCCAGATTAAATTT",4,26.23,6.04,-4.72,0.85,1.5,1.17,0.01,">1 nonsynonymous","F44V G74V T148D L162D",4
"lib1","SARS-CoV-2","AACCCAGCACAATACA",2,10.63,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V71E A89N",2
"lib1","SARS-CoV-2","AACCCAGCCCCCCCAC",5,135.62,10.02,-0.75,0.04,2.47,1.04,0,">1 nonsynonymous","A33Q P96D",2
"lib1","SARS-CoV-2","AACCCAGCTACCACCC",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D S53L D68E P96S G166V",5
"lib1","SARS-CoV-2","AACCCAGGCCACCACC",10,63.32,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G74A P82Y L95P D112R T201Q",5
"lib1","SARS-CoV-2","AACCCAGGGGACTATG",2,27.23,8.24,-2.52,0.13,2.35,1.11,0.01,">1 nonsynonymous","N157R T170S",2
"lib1","SARS-CoV-2","AACCCAGTCTATCAAC",8,98.57,9.06,-1.7,0.19,1.6,1.18,0.01,">1 nonsynonymous","V77S S129D",2
"lib1","SARS-CoV-2","AACCCAGTGCAAACCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N Y50D D98L I104Y K128V",5
"lib1","SARS-CoV-2","AACCCATAAACACTCA",3,8.93,9.46,-1.3,0.47,1.7,1.23,0.08,"1 nonsynonymous","G86H",1
"lib1","SARS-CoV-2","AACCCATAAACTCGTC",3,13.15,9.73,-1.04,0.23,1.91,1.12,0.01,">1 nonsynonymous","T85L N120F F126L",3
"lib1","SARS-CoV-2","AACCCATAAATACATA",3,46.25,10.73,-0.04,0.09,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCATAACGGATAC",7,94.15,10.76,0,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCATACTGGAACG",3,3.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94A",1
"lib1","SARS-CoV-2","AACCCATAGATAAAAC",2,35.3,10.83,0.07,0.08,2.91,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCCATAGCATAACG",5,111.96,6.01,-4.76,0.76,1.5,1.2,0.01,">1 nonsynonymous","K26E C31A G155C",3
"lib1","SARS-CoV-2","AACCCATCAGAGGGCT",5,13.65,6.58,-4.18,0.36,2.26,1.09,0.02,">1 nonsynonymous","C6L F70L D90G W106M",4
"lib1","SARS-CoV-2","AACCCATCGAAATTAC",3,2.17,NA,NA,NA,NA,NA,NA,"stop","N92* F99S N157V",3
"lib1","SARS-CoV-2","AACCCATCGACTGTCG",8,285.27,6,-4.76,1.53,1.5,1.33,0.03,">1 nonsynonymous","V71S A89L T170K",3
"lib1","SARS-CoV-2","AACCCATGTGAAGCAT",7,2.8,NA,NA,NA,NA,NA,NA,"stop","Y39* G117S",2
"lib1","SARS-CoV-2","AACCCATTATGCGCCG",1,54.16,10.69,-0.07,0.06,2.88,1.06,0,">1 nonsynonymous","L5V A105S",2
"lib1","SARS-CoV-2","AACCCATTCAATTATT",11,0.78,NA,NA,NA,NA,NA,NA,"stop","K87S S108*",2
"lib1","SARS-CoV-2","AACCCATTGAAATAAC",3,9.88,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","P82F Y121R",2
"lib1","SARS-CoV-2","AACCCCAAACCCAGCA",1,9.08,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","F44P D98R R124F",3
"lib1","SARS-CoV-2","AACCCCAACCTTCCGA",1,38.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19L Y119F",2
"lib1","SARS-CoV-2","AACCCCACAAAAACGG",3,1.75,NA,NA,NA,NA,NA,NA,"stop","Y35* I88T",2
"lib1","SARS-CoV-2","AACCCCACATATATTA",6,92.58,10.33,-0.43,0.04,2.87,1.03,0,">1 nonsynonymous","E10S A67I",2
"lib1","SARS-CoV-2","AACCCCAGACATAAGT",6,107.25,6,-4.76,0.9,1.5,1.14,0.01,">1 nonsynonymous","D68V T100I Y121M",3
"lib1","SARS-CoV-2","AACCCCAGGATTGACA",1,23.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V37Y C49A A81M R179M",4
"lib1","SARS-CoV-2","AACCCCATCTCTACGC",2,28.68,9.66,-1.1,0.07,2.89,1.06,0,">1 nonsynonymous","L5W G117S E154T",3
"lib1","SARS-CoV-2","AACCCCATCTGACGTT",3,133.14,9.88,-0.88,0.07,2.6,1.05,0,">1 nonsynonymous","P7K Q79L T201I",3
"lib1","SARS-CoV-2","AACCCCATGAAAAAGA",1,7.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3I L162E",2
"lib1","SARS-CoV-2","AACCCCCAAAGAAACA",3,16.02,6.49,-4.27,0.92,1.5,1.29,0.08,">1 nonsynonymous","I72V D98A V103W T201L",4
"lib1","SARS-CoV-2","AACCCCCAGCACGACT",5,74.53,10.11,-0.65,0.05,2.79,1.02,0,">1 nonsynonymous","F8I R78C E141F",3
"lib1","SARS-CoV-2","AACCCCCATCCTTTAC",4,62.97,6.12,-4.64,0.83,1.5,1.16,0.02,">1 nonsynonymous","I2D V37L Q79L Y91R W106M V115L Y178H",7
"lib1","SARS-CoV-2","AACCCCCATGGTTTGA",2,17.6,10.58,-0.19,0.12,3,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACCCCCCATATCCAT",2,139.33,9.27,-1.49,0.09,2.55,1.1,0,">1 nonsynonymous","P96N L125S Y178N",3
"lib1","SARS-CoV-2","AACCCCCCCACTTAGA",2,19.46,9.84,-0.92,0.18,1.81,1.04,0.02,">1 nonsynonymous","T3E Y50M",2
"lib1","SARS-CoV-2","AACCCCCCCCGAACCG",2,1.4,NA,NA,NA,NA,NA,NA,"stop","A14L L38M L60Y A81T N157* Y165P",6
"lib1","SARS-CoV-2","AACCCCCCTAGCCAGA",1,12.83,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","N107A R179M",2
"lib1","SARS-CoV-2","AACCCCCCTCCTAGAG",3,17.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1M S45R K87W N107D",4
"lib1","SARS-CoV-2","AACCCCCCTGTGATTT",6,97.8,10.74,-0.02,0.07,2.9,1.06,0,">1 nonsynonymous","V77L T140E",2
"lib1","SARS-CoV-2","AACCCCCGAATTCTAA",3,155.5,8.53,-2.23,0.08,2.51,1.1,0,">1 nonsynonymous","D98V G146V P197K",3
"lib1","SARS-CoV-2","AACCCCCGATTATCAA",1,29.08,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4F P82K P149K",3
"lib1","SARS-CoV-2","AACCCCCGTACTCTTG",5,20.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4K I28P S41E Y123G",4
"lib1","SARS-CoV-2","AACCCCCTATCACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* Y91R Y119G",3
"lib1","SARS-CoV-2","AACCCCCTTGATCATG",9,71.84,9.52,-1.24,0.09,2.67,1.11,0,">1 nonsynonymous","Q163N V173P",2
"lib1","SARS-CoV-2","AACCCCGAAATAGATG",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M D137P",2
"lib1","SARS-CoV-2","AACCCCGAACATTAGC",3,1.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","AACCCCGATACATCGT",4,2.81,NA,NA,NA,NA,NA,NA,"stop","V32* F62A I72D D98R T140G",5
"lib1","SARS-CoV-2","AACCCCGCCCTCAAAC",2,109.58,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T15S C158I",2
"lib1","SARS-CoV-2","AACCCCGCGTTTGTAA",2,8.66,6.54,-4.22,2,3,1.12,0,">1 nonsynonymous","G101P G146A",2
"lib1","SARS-CoV-2","AACCCCGGACAAAATA",9,74.29,10.75,-0.02,0.06,2.9,1.05,0,">1 nonsynonymous","T55I E141T",2
"lib1","SARS-CoV-2","AACCCCGTCAACCGGA",3,4.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","AACCCCGTTCTATTAA",8,51.68,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A14V A81P",2
"lib1","SARS-CoV-2","AACCCCTAAATTCGAG",3,5.53,10,-0.76,0.53,1.71,1.02,0.06,">1 nonsynonymous","S41W P96M",2
"lib1","SARS-CoV-2","AACCCCTAACGATCTT",10,33,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G83V K87R I138Q L183N",4
"lib1","SARS-CoV-2","AACCCCTCAAGCCGGT",2,22.18,10.72,-0.05,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCCTCCGTGATCA",4,2.51,NA,NA,NA,NA,NA,NA,"stop","S41* D90L D98K T201K",4
"lib1","SARS-CoV-2","AACCCCTCTCCCCATG",6,1.32,NA,NA,NA,NA,NA,NA,"stop","F44N K56* F167V",3
"lib1","SARS-CoV-2","AACCCCTCTCCCGAAT",9,128.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K26C A33Q A81P D90T C150A",5
"lib1","SARS-CoV-2","AACCCCTGCCAAGTAC",3,1.51,NA,NA,NA,NA,NA,NA,"stop","K94L W106D D112T L122*",4
"lib1","SARS-CoV-2","AACCCCTTACTAATAA",7,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S H189I",2
"lib1","SARS-CoV-2","AACCCCTTCAGTCCTT",3,19.51,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","T85I D97Y C158W T170N T201R",5
"lib1","SARS-CoV-2","AACCCGAAAAAATAAA",5,55.02,6.65,-4.11,0.6,1.5,1.24,0.03,">1 nonsynonymous","C6S A33P F47L A105T E141K",5
"lib1","SARS-CoV-2","AACCCGAAATTATACG",5,2.05,NA,NA,NA,NA,NA,NA,"stop","L57* F62*",2
"lib1","SARS-CoV-2","AACCCGAAGTACTGTA",6,0.4,NA,NA,NA,NA,NA,NA,"stop","G9* V20P N92Y E154Y",4
"lib1","SARS-CoV-2","AACCCGAAGTCTAATT",2,37.76,9.84,-0.92,0.15,2.32,1,0.01,">1 nonsynonymous","V11P K26R",2
"lib1","SARS-CoV-2","AACCCGACAACTATGT",9,83.92,9.18,-1.58,0.15,1.73,1.1,0.01,">1 nonsynonymous","N4M S53Y F126L F134Y T140L V153W",6
"lib1","SARS-CoV-2","AACCCGACCTCGTGGC",2,42.37,10.83,0.07,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCGAGGAAAAATT",1,6.42,10.22,-0.54,0.09,3,1.01,0,">1 nonsynonymous","P7S D97K",2
"lib1","SARS-CoV-2","AACCCGATGAATGACA",8,65.05,10.64,-0.12,0.06,2.9,1.01,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","AACCCGATTCCTTTCC",2,72.04,6.46,-4.3,0.38,1.5,1.12,0.01,">1 nonsynonymous","F8L C158W",2
"lib1","SARS-CoV-2","AACCCGCACGATCCCC",1,10.8,8.37,-2.4,0.38,1.5,1.1,0.04,">1 nonsynonymous","N107H P149L F160A",3
"lib1","SARS-CoV-2","AACCCGCCCTTCAAGT",5,34.18,6.81,-3.96,0.41,2,1.06,0.03,">1 nonsynonymous","A14T I28V Y165S",3
"lib1","SARS-CoV-2","AACCCGCCGGTCTTAA",1,37.87,7.5,-3.27,0.15,1.75,1.14,0,">1 nonsynonymous","W23M F160D",2
"lib1","SARS-CoV-2","AACCCGCTAAAAAGGA",1,17.7,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y91S R127H R136S",3
"lib1","SARS-CoV-2","AACCCGCTACCGATGT",1,5.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12H C61L N120M",3
"lib1","SARS-CoV-2","AACCCGGAAACCCCTT",8,57.23,10.54,-0.22,0.03,2.88,1.09,0,">1 nonsynonymous","S184R H189K",2
"lib1","SARS-CoV-2","AACCCGGACACGGATT",5,69.86,10.71,-0.05,0.06,2.85,1.09,0,">1 nonsynonymous","L187H A192D",2
"lib1","SARS-CoV-2","AACCCGGATATCTTGA",11,67.29,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A81N Y91T L125P P161L",4
"lib1","SARS-CoV-2","AACCCGGATTCGCCAT",2,30.91,9.39,-1.38,0.16,1.77,1.19,0.01,">1 nonsynonymous","F12I P133H T148F",3
"lib1","SARS-CoV-2","AACCCGGCAACTGACG",4,94.33,10.58,-0.18,0.04,2.92,1.04,0,">1 nonsynonymous","A42L N64Y",2
"lib1","SARS-CoV-2","AACCCGGCTGACTGTG",1,7.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149S C158T P177S",3
"lib1","SARS-CoV-2","AACCCGGGCGAGATTT",2,12.92,8.39,-2.37,0.34,1.5,1,0.05,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","AACCCGTACCTCGTAG",2,31.81,10.18,-0.58,0.08,2.84,1.03,0,">1 nonsynonymous","N58Y E141K",2
"lib1","SARS-CoV-2","AACCCGTATTGGAGTA",5,45.1,8.49,-2.28,0.13,2.71,1.03,0.01,"1 nonsynonymous","S113I",1
"lib1","SARS-CoV-2","AACCCGTCAACTTCCC",5,54.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50M V77M",2
"lib1","SARS-CoV-2","AACCCGTCCTAATCCA",7,115.61,10.82,0.06,0.08,2.87,1.03,0,">1 nonsynonymous","T3S V173M",2
"lib1","SARS-CoV-2","AACCCGTGACTACTTG",3,17.45,9.15,-1.61,0.18,1.65,1.08,0.02,">1 nonsynonymous","S69E D97N",2
"lib1","SARS-CoV-2","AACCCGTGAGCGAACG",1,15.33,10.24,-0.52,0.1,2.95,1.03,0.01,">1 nonsynonymous","V11F N24K",2
"lib1","SARS-CoV-2","AACCCGTGCTATTTAG",4,88.27,9.78,-0.98,0.13,2.17,1.06,0.01,">1 nonsynonymous","L60S Y91V",2
"lib1","SARS-CoV-2","AACCCGTTAACCCTAC",2,78.23,10.3,-0.47,0.07,2.73,1,0,">1 nonsynonymous","F12V E141S",2
"lib1","SARS-CoV-2","AACCCTAAAGTACTAG",2,24.19,9.9,-0.87,0.14,2.08,1.04,0.01,">1 nonsynonymous","S41K L131T",2
"lib1","SARS-CoV-2","AACCCTAAATATACCT",2,35.13,10.3,-0.47,0.06,2.99,1,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AACCCTAACAAACGAG",9,115.71,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F99D Y178I",2
"lib1","SARS-CoV-2","AACCCTAACATGTAAA",4,33.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K W23G D90V N151V",4
"lib1","SARS-CoV-2","AACCCTAACCTAACTT",5,38.63,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","D59S V65E G117F Y165N R179I",5
"lib1","SARS-CoV-2","AACCCTAACTGAAGTA",2,32.14,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S69I A81S N130M E154V",4
"lib1","SARS-CoV-2","AACCCTAAGCAACTTG",1,19.02,9.39,-1.37,0.11,2.63,1.1,0.01,">1 nonsynonymous","S19A A67C F156L",3
"lib1","SARS-CoV-2","AACCCTAAGTTATTGG",4,27.21,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K56C R124W",2
"lib1","SARS-CoV-2","AACCCTACAAAAATGT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","AACCCTACATGAATGC",4,100.3,6,-4.76,1.08,1.5,1.17,0.01,">1 nonsynonymous","C61R C102F Q144P F160V",4
"lib1","SARS-CoV-2","AACCCTACCCTCGTCC",4,26.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P P82T D97F",3
"lib1","SARS-CoV-2","AACCCTACCGTAACGT",1,8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10G V20K S41M G74R I88C D98L",6
"lib1","SARS-CoV-2","AACCCTACCTTTATGA",1,9.89,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L5M A18G D97V S113V Q168T",5
"lib1","SARS-CoV-2","AACCCTACTCGCAAAG",2,5.77,NA,NA,NA,NA,NA,NA,"stop","F17Y N58* G155Y",3
"lib1","SARS-CoV-2","AACCCTATAAACATGC",3,95.69,10.15,-0.61,0.06,2.78,1,0,">1 nonsynonymous","P96D N171S",2
"lib1","SARS-CoV-2","AACCCTATAAGGCGTG",6,1.82,NA,NA,NA,NA,NA,NA,"stop","P133* G166R",2
"lib1","SARS-CoV-2","AACCCTATCCTTGATG",1,34.05,6.19,-4.57,0.54,2.35,1.2,0.01,">1 nonsynonymous","N120L Y143M G152V",3
"lib1","SARS-CoV-2","AACCCTATGCCCGACT",5,0.73,NA,NA,NA,NA,NA,NA,"stop","N40S K56A N64V N110* Y121W",5
"lib1","SARS-CoV-2","AACCCTATGCGGAGAT",1,16.7,10.4,-0.37,0.08,2.78,1.18,0,">1 nonsynonymous","K87R S147L",2
"lib1","SARS-CoV-2","AACCCTATTACGACCT",3,99.55,10.78,0.02,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCTCAAAACTACA",1,34.31,10.87,0.1,0.09,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCTCAATCGATAA",1,3.64,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACCCTCACAAACCCG",6,30.82,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T63L I88N",2
"lib1","SARS-CoV-2","AACCCTCACGACACAC",6,12.97,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I88N Y119V I142R T148I E186V",5
"lib1","SARS-CoV-2","AACCCTCATCGCTGCG",6,96.45,10,-0.76,0.08,2.04,1.07,0,">1 nonsynonymous","N1V N24F",2
"lib1","SARS-CoV-2","AACCCTCCATTTACTT",8,23.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41D F44S V180A",3
"lib1","SARS-CoV-2","AACCCTCCTCGAAGAT",1,3.63,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACCCTCGAAAAGAGT",3,108.82,10.19,-0.58,0.08,2.7,1.05,0,">1 nonsynonymous","T63D Q84L Q144A T201S",4
"lib1","SARS-CoV-2","AACCCTCGAAGCAACC",2,7.15,7,-3.76,0.48,1.61,1,0.04,">1 nonsynonymous","C6Q Y93S",2
"lib1","SARS-CoV-2","AACCCTCTCATACATA",1,19.8,10.25,-0.51,0.08,2.86,1.05,0,"1 nonsynonymous","C31V",1
"lib1","SARS-CoV-2","AACCCTGAAAAAATGC",2,54.35,10.63,-0.14,0.09,2.92,1.06,0,">1 nonsynonymous","L5F L60Y P149N",3
"lib1","SARS-CoV-2","AACCCTGAAAACGTAT",3,17.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41I C61T P161I",3
"lib1","SARS-CoV-2","AACCCTGACGTGAGTG",5,0.51,NA,NA,NA,NA,NA,NA,"stop","C6* N40M W106V F126A F156N",5
"lib1","SARS-CoV-2","AACCCTGACTAGACTT",5,1.04,NA,NA,NA,NA,NA,NA,"stop","S69M S139L V173*",3
"lib1","SARS-CoV-2","AACCCTGAGACCTACG",7,52.94,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A22D Y50H G86R N110M T148G",5
"lib1","SARS-CoV-2","AACCCTGTATAAGGGT",1,15.91,10.74,-0.02,0.08,2.82,1.11,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AACCCTGTCAAGAACC",2,23.97,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P7S R16W N58F R124K T140E",5
"lib1","SARS-CoV-2","AACCCTGTCACGGGAC",3,8.36,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","N1T A33L C49T A89R G146L",5
"lib1","SARS-CoV-2","AACCCTTAAAACTTAC",3,35.71,9.95,-0.81,0.16,2.84,1.15,0.01,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","AACCCTTACTTTACCA",9,46.24,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V77G G86Q N107T S113Q P133S",5
"lib1","SARS-CoV-2","AACCCTTATGATTAAA",4,49.42,10.79,0.03,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCCTTGTCTACGTG",2,37.07,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","F8R K26W S41F P149T",4
"lib1","SARS-CoV-2","AACCCTTTAAAAGAAG",1,10.36,10.8,0.03,0.14,2.95,1.02,0.01,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","AACCCTTTACAGGCAG",8,70.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11L D59M F99T",3
"lib1","SARS-CoV-2","AACCCTTTACCACGAA",4,84.01,6,-4.76,0.86,1.5,1.12,0,">1 nonsynonymous","Y66R N107G D112S G174E",4
"lib1","SARS-CoV-2","AACCCTTTCGTAGGGC",4,8.06,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N4P N13A G116F Y165N S200K",5
"lib1","SARS-CoV-2","AACCCTTTTCTAAAAA",1,37.04,8.02,-2.75,0.23,2.15,1.1,0.03,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","AACCCTTTTTACACCA",1,29.22,10.64,-0.12,0.05,2.92,1.06,0,"1 nonsynonymous","A42P",1
"lib1","SARS-CoV-2","AACCGAAACATATGTT",5,37.32,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K48A N58Y D90S G166T L183T",5
"lib1","SARS-CoV-2","AACCGAAACTAGTAGC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","N30P A42L Q168* V181L T201V",5
"lib1","SARS-CoV-2","AACCGAACGAGTGGTG",6,98.67,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L125E A145T P149L G172L",4
"lib1","SARS-CoV-2","AACCGAACGGTTTATA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","C61L V71* D97L Y121T",4
"lib1","SARS-CoV-2","AACCGAAGAAAAGTAA",3,70.75,10.63,-0.14,0.04,2.87,1.03,0,">1 nonsynonymous","R16S T55I L111R",3
"lib1","SARS-CoV-2","AACCGAAGATCACATA",9,81.07,6.38,-4.38,0.71,1.5,1.17,0.04,">1 nonsynonymous","D59I Y93C",2
"lib1","SARS-CoV-2","AACCGAAGGGCGACAT",5,81.13,10.67,-0.09,0.04,2.88,1.08,0,">1 nonsynonymous","N30Q A42R",2
"lib1","SARS-CoV-2","AACCGAATACCAAAAA",2,8.85,10.83,0.07,0.34,2.96,1,0.01,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","AACCGAATACGAGTTA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib1","SARS-CoV-2","AACCGAATCAGTCCAA",1,24.26,10.27,-0.5,0.05,2.91,1,0,">1 nonsynonymous","S41Y K56L K128V P149K",4
"lib1","SARS-CoV-2","AACCGAATGAGCGCAA",2,17.2,8.8,-1.97,0.3,1.65,1.14,0.04,">1 nonsynonymous","N1V S43L Y119F S129C S139L",5
"lib1","SARS-CoV-2","AACCGAATGCCAAAGC",3,62.65,6.03,-4.73,0.42,1.5,1.14,0,">1 nonsynonymous","S29A A81C A89D D112H",4
"lib1","SARS-CoV-2","AACCGAATGCCAATCC",4,91.96,10.76,-0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCGAATTGCATAAT",13,222.81,10.5,-0.27,0.05,2.9,1.02,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","AACCGACACATCATAA",2,2.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150H",1
"lib1","SARS-CoV-2","AACCGACATCCGCAGT",3,43.12,10.79,0.03,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCGACCATGACCTC",1,0.22,NA,NA,NA,NA,NA,NA,"stop","D59W D90* W106L",3
"lib1","SARS-CoV-2","AACCGACTACCCCTCG",2,17.92,10.49,-0.27,0.11,2.84,1.13,0.01,">1 nonsynonymous","V37W F44S",2
"lib1","SARS-CoV-2","AACCGACTCCTACTGC",1,0.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","AACCGAGAGATTTGAT",1,11.32,11.05,0.29,0.09,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCGAGCATCTTTCA",1,12.52,10.27,-0.5,0.1,2.69,1,0.01,">1 nonsynonymous","A33S F62T Y121Q",3
"lib1","SARS-CoV-2","AACCGAGTCTACATTA",2,40.85,10.71,-0.05,0.09,2.87,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCGATAAACATCTG",5,49.63,8.19,-2.57,0.16,1.96,1.06,0.01,">1 nonsynonymous","G117M P149V S164D",3
"lib1","SARS-CoV-2","AACCGATACTATAATT",5,56.84,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","I80E G86R D112S F167C",4
"lib1","SARS-CoV-2","AACCGATGAAAAATTA",6,59.21,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","S43V G86A Y143G",3
"lib1","SARS-CoV-2","AACCGATGTGACATTT",5,71.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L N58F L162Q",3
"lib1","SARS-CoV-2","AACCGATTATCGATGG",4,22.48,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y91V D112H V173L",3
"lib1","SARS-CoV-2","AACCGATTGGCTTGTT",5,28.93,6.91,-3.86,0.1,2.05,1.14,0,"1 nonsynonymous","C150E",1
"lib1","SARS-CoV-2","AACCGCAACTAAGCCT",13,321.52,10.77,0,0.06,2.87,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCGCACTCTTATGC",1,30.57,10.77,0.01,0.06,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCGCATGCAAGTGA",4,16.16,6.03,-4.74,1.34,1.5,1.19,0.04,">1 nonsynonymous","G9R L60Y L131W",3
"lib1","SARS-CoV-2","AACCGCATTCCGGTCG",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T V37F K56Y G83D N92T N120Q K128S S200P",8
"lib1","SARS-CoV-2","AACCGCCAAAACACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1K N92V N107* P149S",4
"lib1","SARS-CoV-2","AACCGCCAGTCTTACG",4,0,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib1","SARS-CoV-2","AACCGCCATATTTTAG",16,107.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C61P S69V L125F Y165K L183F",5
"lib1","SARS-CoV-2","AACCGCCCAACAAATG",8,129.06,8.29,-2.47,0.09,2.47,1.1,0,">1 nonsynonymous","C6F G166W",2
"lib1","SARS-CoV-2","AACCGCCCTGACACCC",6,118.8,10.75,-0.01,0.04,2.91,1.05,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","AACCGCCGAGTTCTTG",1,8.63,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L60F K94T",2
"lib1","SARS-CoV-2","AACCGCCTGCGCCGGA",8,66.72,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T55M L95V Y121H D137S C158Y",5
"lib1","SARS-CoV-2","AACCGCGAAGTGTCCT",7,89.14,7.8,-2.97,0.18,1.62,1.16,0.01,">1 nonsynonymous","G9N G86W",2
"lib1","SARS-CoV-2","AACCGCGAATCATGAA",5,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104F L183P",2
"lib1","SARS-CoV-2","AACCGCGATCTCTTGA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","T3P L57C A67V D98S E154*",5
"lib1","SARS-CoV-2","AACCGCGCATGGAAAA",3,50.31,10.37,-0.39,0.08,2.82,1.03,0,">1 nonsynonymous","A42G P96H L122S",3
"lib1","SARS-CoV-2","AACCGCGCTGATGGAC",5,0.54,NA,NA,NA,NA,NA,NA,"stop","S113* T140K",2
"lib1","SARS-CoV-2","AACCGCGTAAGTCACA",3,1.19,NA,NA,NA,NA,NA,NA,"stop","A81Y D97* F167S",3
"lib1","SARS-CoV-2","AACCGCGTACCGTCGC",1,16.35,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S36L Y50F G83S G86N C150S",5
"lib1","SARS-CoV-2","AACCGCGTGACTTAAT",4,51.36,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","W23M I28L P133T P149Y",4
"lib1","SARS-CoV-2","AACCGCTAACCTAAAA",2,15.96,10.38,-0.38,0.1,2.93,1.07,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","AACCGCTACGCAAGAC",1,58.6,8.93,-1.83,0.17,1.56,1.14,0.01,">1 nonsynonymous","G51V E141M N151S",3
"lib1","SARS-CoV-2","AACCGCTCTAAATGAC",7,146.3,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","AACCGCTGATAGAAAT",3,20.54,9.74,-1.03,0.15,1.99,1.13,0.01,">1 nonsynonymous","A14T A67T",2
"lib1","SARS-CoV-2","AACCGCTGGGATGAGA",5,9.44,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","T3V I88G A192S",3
"lib1","SARS-CoV-2","AACCGGAAAATAGTTT",1,14.09,6.68,-4.08,0.41,1.5,1.05,0.03,">1 nonsynonymous","E154F Y159V K198M",3
"lib1","SARS-CoV-2","AACCGGAACATAGGGT",1,66.04,9.97,-0.8,0.07,2.2,1.04,0,">1 nonsynonymous","K26L P96G L188W",3
"lib1","SARS-CoV-2","AACCGGAACTGTGGAC",4,93.05,10.73,-0.04,0.04,2.91,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCGGAATGATCTCA",2,34.07,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N40V Y143K",2
"lib1","SARS-CoV-2","AACCGGATAAAAACAG",8,57.59,10.26,-0.5,0.04,2.82,1.06,0,"1 nonsynonymous","I142Q",1
"lib1","SARS-CoV-2","AACCGGATAATAAAGG",2,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y L38F Y91L D98K C158R T201W",6
"lib1","SARS-CoV-2","AACCGGATATATCACC",3,61.9,7.22,-3.55,0.22,1.51,1.13,0.01,">1 nonsynonymous","N151L Y159R",2
"lib1","SARS-CoV-2","AACCGGCACACACAGC",1,19.87,10.76,-0.01,0.07,2.88,1.05,0,"1 nonsynonymous","A192E",1
"lib1","SARS-CoV-2","AACCGGCACTGTGCAA",1,6.04,10.91,0.15,0.15,2.99,1,0.01,"1 nonsynonymous","A190D",1
"lib1","SARS-CoV-2","AACCGGCGAAACGAAA",6,115.08,10.24,-0.52,0.04,2.7,1,0,"1 nonsynonymous","S19G",1
"lib1","SARS-CoV-2","AACCGGCGCATCACGG",1,37.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122S D137K",2
"lib1","SARS-CoV-2","AACCGGCTAGAATACC",5,47.93,6.02,-4.74,0.32,1.5,1.07,0,">1 nonsynonymous","P161F Q168R",2
"lib1","SARS-CoV-2","AACCGGCTATCAAATG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","S113V Y119* K132Q",3
"lib1","SARS-CoV-2","AACCGGCTCTATTGGG",1,45.26,10.73,-0.03,0.06,2.97,1.02,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AACCGGGAAGTATCGC",1,34.24,9.14,-1.63,0.06,2.94,1.04,0,">1 nonsynonymous","Y35L P96S Y119I",3
"lib1","SARS-CoV-2","AACCGGGATTGTAACA",2,61.21,10.61,-0.15,0.09,2.9,1,0,"1 nonsynonymous","I138A",1
"lib1","SARS-CoV-2","AACCGGGCATCCTCTT",4,24.89,6,-4.76,2,3,1.23,0,">1 nonsynonymous","F8A Y35N P96F K132A I142E T170N",6
"lib1","SARS-CoV-2","AACCGGGGAAAGTATA",2,3.01,NA,NA,NA,NA,NA,NA,"stop","A14P D34* E141N",3
"lib1","SARS-CoV-2","AACCGGGGCGATATCA",2,48.55,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","AACCGGTATATCTACG",4,18.33,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D68E L125G Q168G",3
"lib1","SARS-CoV-2","AACCGGTATCACTCGG",5,54.1,6.11,-4.66,1.02,1.5,1.24,0.03,">1 nonsynonymous","N4K L5C F44E G51F A81M T201N",6
"lib1","SARS-CoV-2","AACCGGTATTTGTCAA",2,24.11,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5Y V77R N92W T201I",4
"lib1","SARS-CoV-2","AACCGGTCATTCATTC",2,164.69,10.79,0.03,0.06,2.95,1.01,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","AACCGGTGATAGACAA",5,74.3,10.86,0.09,0.07,2.92,1.04,0,"1 nonsynonymous","N64H",1
"lib1","SARS-CoV-2","AACCGGTTAGAAAAAC",3,5.22,6,-4.76,2,3,1.15,0.02,">1 nonsynonymous","A33I T55L R124S",3
"lib1","SARS-CoV-2","AACCGGTTTATCCGCA",1,1.32,NA,NA,NA,NA,NA,NA,"stop","S19M Y165*",2
"lib1","SARS-CoV-2","AACCGTAAACGCTCAG",2,7.11,6.44,-4.33,0.83,3,1.03,0.01,">1 nonsynonymous","V37I I88S G101T S113Y L122N I142L",6
"lib1","SARS-CoV-2","AACCGTAAAGCTAAAA",5,44.57,10.62,-0.14,0.03,2.98,1,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","AACCGTAAATAGATAA",5,80.23,6.58,-4.18,0.56,1.5,1.25,0.03,">1 nonsynonymous","Y91G D97I R136L E154R",4
"lib1","SARS-CoV-2","AACCGTAATAAAAAAA",3,172.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y39L F47I P177Q",3
"lib1","SARS-CoV-2","AACCGTAATGTGAGTT",7,98,6.9,-3.86,0.17,1.5,1.15,0.01,">1 nonsynonymous","C150D F156Q",2
"lib1","SARS-CoV-2","AACCGTACAACGGCAA",4,42.77,8.38,-2.38,0.27,1.5,1.2,0.03,">1 nonsynonymous","D34A F134A G166C",3
"lib1","SARS-CoV-2","AACCGTACAGGACACC",5,77.39,10.09,-0.67,0.07,2.86,1.03,0,">1 nonsynonymous","K56Q G155Y",2
"lib1","SARS-CoV-2","AACCGTACATAAGTCG",1,19.42,10.34,-0.42,0.07,2.81,1,0,"1 nonsynonymous","Y35P",1
"lib1","SARS-CoV-2","AACCGTAGCAACCACG",2,0.28,NA,NA,NA,NA,NA,NA,"stop","C49* T201C",2
"lib1","SARS-CoV-2","AACCGTATATATAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50L D68*",2
"lib1","SARS-CoV-2","AACCGTATATGGGACA",5,79.99,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S19E C102L N171S S184H",4
"lib1","SARS-CoV-2","AACCGTATCCCCAACC",4,52.84,10.6,-0.17,0.06,2.88,1.07,0,"1 nonsynonymous","P54G",1
"lib1","SARS-CoV-2","AACCGTATGCCTAGCT",1,1.23,NA,NA,NA,NA,NA,NA,"stop","G83D F134*",2
"lib1","SARS-CoV-2","AACCGTCAAATAACGT",3,51.25,10.74,-0.02,0.06,2.93,1.02,0,"1 nonsynonymous","K48T",1
"lib1","SARS-CoV-2","AACCGTCACGGTACAT",11,147.82,9.87,-0.9,0.08,2.31,1.03,0,">1 nonsynonymous","A89Q D98N",2
"lib1","SARS-CoV-2","AACCGTCCGCACCTAT",2,6.56,6,-4.76,2,1.5,1.34,0.08,">1 nonsynonymous","T46I D90P G155L",3
"lib1","SARS-CoV-2","AACCGTCCGGCGAATT",1,15.43,10.08,-0.68,0.11,2.16,1.07,0.01,"1 nonsynonymous","F47N",1
"lib1","SARS-CoV-2","AACCGTGAGCTTCCGG",5,75.94,7.75,-3.01,0.23,1.5,1.14,0.02,">1 nonsynonymous","F44V D97M Y119W Q168L",4
"lib1","SARS-CoV-2","AACCGTGATAATAGAT",2,1.77,NA,NA,NA,NA,NA,NA,"stop","N13Q W23* C31G G51L D90P E141L",6
"lib1","SARS-CoV-2","AACCGTGGAAACACGG",5,57.17,10.76,0,0.08,2.87,1.04,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","AACCGTTACAGAATCT",3,0,NA,NA,NA,NA,NA,NA,"stop","A22S D68A A81T P133L E141*",5
"lib1","SARS-CoV-2","AACCGTTATTTGCCGA",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D S53R F70V",3
"lib1","SARS-CoV-2","AACCGTTGACTTTATA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","C6V G116L Y175*",3
"lib1","SARS-CoV-2","AACCGTTGAGTTTATG",1,6.62,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Y93S T100Y",2
"lib1","SARS-CoV-2","AACCGTTGATTCCTAA",1,4.59,NA,NA,NA,NA,NA,NA,"stop","N13M A18V V115I Y175*",4
"lib1","SARS-CoV-2","AACCGTTTCACACTAT",3,50.69,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20E R124S L131V",3
"lib1","SARS-CoV-2","AACCGTTTCGAATTCG",5,6.71,8.44,-2.32,0.4,1.5,1.15,0.04,">1 nonsynonymous","N24L D34P S43T T140F",4
"lib1","SARS-CoV-2","AACCTAAAATATATAC",1,26.35,10.67,-0.1,0.07,2.88,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTAAACCCCATCT",1,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57C G83V N107K G117F",4
"lib1","SARS-CoV-2","AACCTAAAGGCTAACT",8,1.89,NA,NA,NA,NA,NA,NA,"stop","L60* Q163K P197T",3
"lib1","SARS-CoV-2","AACCTAAATAGAATCT",1,18.68,9.05,-1.72,0.16,1.87,1.17,0.01,"1 nonsynonymous","Y91D",1
"lib1","SARS-CoV-2","AACCTAAATCAATAGA",7,167.67,10.71,-0.06,0.05,2.94,1.02,0,"1 nonsynonymous","Q84I",1
"lib1","SARS-CoV-2","AACCTAAATCATCACT",3,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","AACCTAACTAAACCAA",4,30.66,8.68,-2.09,0.17,1.5,1.13,0.01,">1 nonsynonymous","I2V F8A P54F T100N L122T",5
"lib1","SARS-CoV-2","AACCTAACTACGAGGG",2,1169.02,10.72,-0.04,0.04,2.94,1.04,0,"1 nonsynonymous","S36G",1
"lib1","SARS-CoV-2","AACCTAACTAGTAAGT",2,47.29,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T55K I138A G166R N171K",4
"lib1","SARS-CoV-2","AACCTAACTCATATAA",13,246.78,10.76,0,0.06,2.88,1.08,0,"1 nonsynonymous","S129N",1
"lib1","SARS-CoV-2","AACCTAAGCTAAAACG",2,23.21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8L S43N G74S Y121D P161L",5
"lib1","SARS-CoV-2","AACCTAAGGATCAATT",2,6.17,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V103L L122Q L183G",3
"lib1","SARS-CoV-2","AACCTAAGTACTTAAA",8,150.84,9.77,-0.99,0.05,2.71,1.09,0,"1 nonsynonymous","G74S",1
"lib1","SARS-CoV-2","AACCTAAGTGGTCGAA",1,7.41,6.35,-4.42,1.2,3,1.19,0.03,">1 nonsynonymous","Q84W F134E A145I C158L",4
"lib1","SARS-CoV-2","AACCTAATAAGACGTC",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N A105K S139Y P149A P161R",5
"lib1","SARS-CoV-2","AACCTAATACATTTGG",2,45.8,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C61P N157F G166P",3
"lib1","SARS-CoV-2","AACCTAATAGGTTGGA",5,84.49,10.72,-0.04,0.06,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCTAATATCACCAC",6,168.74,10.3,-0.46,0.04,2.9,1.03,0,">1 nonsynonymous","G83W K87I",2
"lib1","SARS-CoV-2","AACCTAATCGAAGCCT",8,0.71,NA,NA,NA,NA,NA,NA,"stop","A145D Q163G F167S L187*",4
"lib1","SARS-CoV-2","AACCTAATGTCAAAAA",5,93.4,10.68,-0.08,0.04,2.91,1.01,0,">1 nonsynonymous","E141K G152A",2
"lib1","SARS-CoV-2","AACCTAATGTGAACAA",1,8.77,10.84,0.08,0.21,2.92,1,0.01,"1 nonsynonymous","R27M",1
"lib1","SARS-CoV-2","AACCTAATTCAGCAAG",3,12.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P96L K114V T140V F185S A190E T201Y",6
"lib1","SARS-CoV-2","AACCTACAAAAAATCG",1,5.91,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L57V Y123N P133I Y178P K198R",5
"lib1","SARS-CoV-2","AACCTACAACAGAAAA",6,72.74,10.57,-0.19,0.04,2.99,1,0,">1 nonsynonymous","Y39K N120F",2
"lib1","SARS-CoV-2","AACCTACAACAGCTTA",14,201.71,10.52,-0.25,0.03,2.94,1.02,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","AACCTACAACCTATCC",2,11.29,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G51E C102I G155S N171C",4
"lib1","SARS-CoV-2","AACCTACACAAATGAA",4,339.82,10.61,-0.15,0.05,2.81,1.07,0,">1 nonsynonymous","Q84M T100V",2
"lib1","SARS-CoV-2","AACCTACCAAACAATT",5,46.08,8.56,-2.2,0.13,2.59,1.07,0.01,">1 nonsynonymous","T140N T170I",2
"lib1","SARS-CoV-2","AACCTACCATACTCTA",6,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R D97V C102D R127C",4
"lib1","SARS-CoV-2","AACCTACCCCAATATC",2,14.14,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N13C Y93L Y119L K128P S184G",5
"lib1","SARS-CoV-2","AACCTACCGAGCAGAG",2,40.96,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T3M F44A T55I R124T",4
"lib1","SARS-CoV-2","AACCTACCTAATCAAA",1,26.42,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F47G S69Q N118H",3
"lib1","SARS-CoV-2","AACCTACCTGATTTCT",3,9.5,10.22,-0.55,0.21,2.94,1.11,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AACCTACGAGTAATAC",7,79.92,10.81,0.04,0.07,2.9,1.08,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","AACCTACGGATGTTTT",1,32.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38S N157I",2
"lib1","SARS-CoV-2","AACCTACTAATAGTGC",5,13.63,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","S45R V103G P149V",3
"lib1","SARS-CoV-2","AACCTAGACGGTTAGG",2,0.27,NA,NA,NA,NA,NA,NA,"stop","L5* E154V",2
"lib1","SARS-CoV-2","AACCTAGACTAACCGC",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94A K132I P161Y L183F",4
"lib1","SARS-CoV-2","AACCTAGATTCATGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* Y93R R124L I138P",4
"lib1","SARS-CoV-2","AACCTAGCCCCTGACG",2,44.16,10.49,-0.28,0.05,2.92,1,0,">1 nonsynonymous","A145T T201I",2
"lib1","SARS-CoV-2","AACCTAGCCTTGTGAA",1,14.35,10.79,0.03,0.09,2.76,1.2,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTAGCTTTTACTT",1,41.77,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","E10G S36V A105D",3
"lib1","SARS-CoV-2","AACCTAGGACTGACTT",7,44.44,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G83R D112R",2
"lib1","SARS-CoV-2","AACCTAGGATGCTCAA",1,41.34,9.62,-1.14,0.17,1.7,1.18,0.01,">1 nonsynonymous","G9K I88T",2
"lib1","SARS-CoV-2","AACCTAGGCAATCGCG",2,49.42,7.4,-3.37,0.3,1.5,1.05,0.03,">1 nonsynonymous","T46L G86T S147I T201K",4
"lib1","SARS-CoV-2","AACCTAGGCTATTTAA",2,23.12,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","I88V G116D Y121W P149Q Q168L F185V",6
"lib1","SARS-CoV-2","AACCTAGGTTCAGAAC",1,24.05,10.66,-0.1,0.05,2.88,1.04,0,">1 nonsynonymous","K48R S129V P149I S200M",4
"lib1","SARS-CoV-2","AACCTATAAATAGATT",1,5.01,9.68,-1.09,0.34,2.34,1.12,0.03,">1 nonsynonymous","N4W T15N F156Q",3
"lib1","SARS-CoV-2","AACCTATAATGGTCTG",5,9.67,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E76V D90I R127V L183T",4
"lib1","SARS-CoV-2","AACCTATACCCTCGAA",4,36.73,9.42,-1.34,0.16,1.64,1.22,0.01,">1 nonsynonymous","Y91Q S139R",2
"lib1","SARS-CoV-2","AACCTATATACTAAAA",4,4.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","AACCTATCATGTATAG",4,33.93,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D90Y L95S G172A R179V",4
"lib1","SARS-CoV-2","AACCTATCTAAAAAGG",4,26.79,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V11I D68M K87C G116C N130L",5
"lib1","SARS-CoV-2","AACCTATGGACAAAAC",6,89.55,10.82,0.05,0.04,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTATTCATTTCCA",2,2.44,NA,NA,NA,NA,NA,NA,"stop","G9* S53T G174D",3
"lib1","SARS-CoV-2","AACCTATTCTATAACG",11,3.97,NA,NA,NA,NA,NA,NA,"stop","Y39K S45* D98R G146S",4
"lib1","SARS-CoV-2","AACCTATTGCTCTCAA",7,49.5,9.93,-0.83,0.09,2.69,1.03,0,">1 nonsynonymous","N107G K128G S200L",3
"lib1","SARS-CoV-2","AACCTCAAAAACACGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACCTCAAAGCCTCCG",3,39.38,10.76,-0.01,0.09,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTCAAAGCTGTCA",4,23.33,8.43,-2.34,0.29,1.5,1.12,0.04,">1 nonsynonymous","T3R K87G W106I N151G",4
"lib1","SARS-CoV-2","AACCTCAACGTCCTTG",6,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90E N151T",2
"lib1","SARS-CoV-2","AACCTCACGAAATTCC",1,6.04,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","V181W",1
"lib1","SARS-CoV-2","AACCTCAGCAGGACGT",1,1.39,NA,NA,NA,NA,NA,NA,"stop","F17E Y91* Y175W",3
"lib1","SARS-CoV-2","AACCTCAGTGCCCGAA",8,1.17,NA,NA,NA,NA,NA,NA,"stop","T100I N120* G152F",3
"lib1","SARS-CoV-2","AACCTCATTTGGAAAG",1,30.07,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V37N V65A S113P Y143I",4
"lib1","SARS-CoV-2","AACCTCCAACTTTGGT",2,47.91,10.66,-0.11,0.09,2.87,1.05,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","AACCTCCATAACACAA",3,37.47,10.09,-0.67,0.08,2.8,1.04,0,">1 nonsynonymous","N13S V37N A42V K87F N151G",5
"lib1","SARS-CoV-2","AACCTCCATAATAGCA",1,35.36,10.79,0.02,0.07,2.89,1.07,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","AACCTCCCCAAGCCAA",2,19.07,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","N58I Q84P D90P",3
"lib1","SARS-CoV-2","AACCTCCCCTTGTATT",6,97.66,9.57,-1.19,0.09,2.44,1.12,0,">1 nonsynonymous","Y121V C195K T201N",3
"lib1","SARS-CoV-2","AACCTCCCTTAAGGAG",2,17.67,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6V N40T C49S K114S I142A T148W F167L",7
"lib1","SARS-CoV-2","AACCTCCGACAAAGAG",4,1.09,NA,NA,NA,NA,NA,NA,"stop","E10K C61K Y121*",3
"lib1","SARS-CoV-2","AACCTCCGGTATGCCA",4,50.95,9.05,-1.71,0.16,1.69,1.14,0.01,">1 nonsynonymous","A14R A105T F134R",3
"lib1","SARS-CoV-2","AACCTCCTAGCATAGT",7,115.36,9.06,-1.71,0.14,1.83,1.11,0.01,">1 nonsynonymous","S69W G174P H189Y",3
"lib1","SARS-CoV-2","AACCTCCTCAACTATA",1,20.83,6.66,-4.1,0.27,1.5,1.2,0.01,">1 nonsynonymous","C6S R127N",2
"lib1","SARS-CoV-2","AACCTCCTTGCTTAGC",3,34.14,10.13,-0.64,0.06,2.76,1.03,0,"1 nonsynonymous","S139F",1
"lib1","SARS-CoV-2","AACCTCGACGTAACTT",1,46.69,10.52,-0.25,0.05,2.93,1.05,0,"1 nonsynonymous","K132W",1
"lib1","SARS-CoV-2","AACCTCGATAAACAAG",6,93.56,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9T K26S G83V G166K",4
"lib1","SARS-CoV-2","AACCTCGATATCCATT",1,8.91,6,-4.76,2,3,1.2,0,">1 nonsynonymous","Q84K Y93M T148I G172K",4
"lib1","SARS-CoV-2","AACCTCGATCATGTAT",4,35.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99L G101P",2
"lib1","SARS-CoV-2","AACCTCGATTCGTAAG",3,42.58,6.14,-4.63,1.13,1.5,1.17,0.04,">1 nonsynonymous","T3G L57G G74D N109K G166R",5
"lib1","SARS-CoV-2","AACCTCGCTAGACACA",3,56.05,10.57,-0.19,0.06,2.88,1.01,0,">1 nonsynonymous","S41I D97R",2
"lib1","SARS-CoV-2","AACCTCGTAAACCCGA",2,64.86,10.31,-0.45,0.06,2.82,1.02,0,">1 nonsynonymous","S45D G83V",2
"lib1","SARS-CoV-2","AACCTCGTTATTGACT",2,21.82,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","I104F V182Y",2
"lib1","SARS-CoV-2","AACCTCTAACAGGCGT",3,9.26,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","N1S P177V V182T",3
"lib1","SARS-CoV-2","AACCTCTAATACCAGT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","A22G V71L G74R D98V F134* T170*",6
"lib1","SARS-CoV-2","AACCTCTAATAGCTGA",6,1.11,NA,NA,NA,NA,NA,NA,"stop","L131G F160P S184*",3
"lib1","SARS-CoV-2","AACCTCTATAGAGCTA",7,47.51,10.59,-0.17,0.07,2.92,1.05,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","AACCTCTCCAAAGAAA",3,18.66,10.03,-0.73,0.13,2.32,1.06,0.01,">1 nonsynonymous","R16N E135S E186P",3
"lib1","SARS-CoV-2","AACCTCTCGCTTCAAC",2,50.16,10.62,-0.15,0.06,2.99,1,0,">1 nonsynonymous","K56Q C61G",2
"lib1","SARS-CoV-2","AACCTCTCTCAAAGCC",4,29.1,10.55,-0.22,0.06,2.84,1.05,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","AACCTCTTAGACTAAG",1,13.75,10.7,-0.06,0.08,2.89,1.04,0,">1 nonsynonymous","N64R F160S",2
"lib1","SARS-CoV-2","AACCTCTTCGAAGTCC",5,138.8,10.75,-0.02,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTCTTGCTTGCTA",1,6.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49Y D59L V181L",3
"lib1","SARS-CoV-2","AACCTCTTGGATCGCG",1,37.65,9.8,-0.96,0.19,1.88,1.11,0.02,">1 nonsynonymous","T55Y V77W T201Q",3
"lib1","SARS-CoV-2","AACCTGAATAACAAAT",2,38.8,10.76,0,0.08,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AACCTGAATTCGGGAT",5,77.03,8.51,-2.25,0.09,2.35,1.08,0,">1 nonsynonymous","D59L G117F",2
"lib1","SARS-CoV-2","AACCTGACATGACCGT",2,10.06,6.19,-4.58,2,1.5,1.04,0.03,">1 nonsynonymous","G86S V103R H189S",3
"lib1","SARS-CoV-2","AACCTGACCGATAGAC",4,42.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D68G H189F",2
"lib1","SARS-CoV-2","AACCTGACGAAAAAGC",1,33.76,10.78,0.01,0.05,2.91,1.02,0,">1 nonsynonymous","E10K V37M E154Q",3
"lib1","SARS-CoV-2","AACCTGACTAACCGGT",3,5.07,NA,NA,NA,NA,NA,NA,"stop","R25* K56N S113N S164L",4
"lib1","SARS-CoV-2","AACCTGACTAAGTTGA",4,111.67,10.7,-0.07,0.05,2.89,1.04,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","AACCTGAGATGCCCGC",1,17.08,9.62,-1.14,0.05,2.97,1,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","AACCTGAGCGGATTAA",10,4.52,NA,NA,NA,NA,NA,NA,"stop","P7Q S69* Q84A R127F K199T",5
"lib1","SARS-CoV-2","AACCTGAGCTTAGAAA",3,9.11,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","I2G I88W F160L Q168L",4
"lib1","SARS-CoV-2","AACCTGAGGAAGTATG",6,47.78,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S19R Y35C C61R W106S K128M G166R E186S",7
"lib1","SARS-CoV-2","AACCTGATAATTTTAG",12,141.51,10.66,-0.11,0.05,2.9,1.02,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AACCTGATGATGTTCA",7,2.48,NA,NA,NA,NA,NA,NA,"stop","Y39* L122V P133F S139A P149T P197*",6
"lib1","SARS-CoV-2","AACCTGATGCTCCTGG",1,10.24,10.59,-0.17,0.37,1.92,1.12,0.04,">1 nonsynonymous","G9K I28K K48V K94A",4
"lib1","SARS-CoV-2","AACCTGATGTGCACGA",6,21.32,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K87I K94L K128P F167W",4
"lib1","SARS-CoV-2","AACCTGCGAACCCTAA",3,11.84,6,-4.76,1.88,3,1.11,0.01,">1 nonsynonymous","E10Y D90S C102R",3
"lib1","SARS-CoV-2","AACCTGCGATAGTTGA",2,26.24,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P96L F99L Y178N T201D",4
"lib1","SARS-CoV-2","AACCTGCGCTGGCAAG",2,1.91,NA,NA,NA,NA,NA,NA,"stop","F8* S147W",2
"lib1","SARS-CoV-2","AACCTGCTAAACTCTT",1,67.34,6,-4.76,2,3,1.12,0,"1 nonsynonymous","R124L",1
"lib1","SARS-CoV-2","AACCTGCTGCTACTGC",8,15.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G83E P96D T100P Y119S P149N V182G",6
"lib1","SARS-CoV-2","AACCTGGAAAGCACAG",5,0.44,NA,NA,NA,NA,NA,NA,"stop","F44N Q84R W106R N118S F160* P169N",6
"lib1","SARS-CoV-2","AACCTGGACTATCGTT",2,17.52,8.22,-2.54,0.35,1.5,1.19,0.05,">1 nonsynonymous","D112F S129Q",2
"lib1","SARS-CoV-2","AACCTGGATAGATAAG",2,10.59,6,-4.76,2,3,1.2,0,">1 nonsynonymous","C31V L95Y",2
"lib1","SARS-CoV-2","AACCTGGCCTACAATA",10,58.78,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P96I N120L S139D P149S",4
"lib1","SARS-CoV-2","AACCTGGGAAAACACC",6,27.02,10.84,0.08,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTGGGCGTTACGC",5,25.03,6.8,-3.96,0.35,1.5,1.06,0.03,">1 nonsynonymous","T85W A89D",2
"lib1","SARS-CoV-2","AACCTGGTGATGCTTT",5,67.84,8.1,-2.67,0.21,1.5,1.09,0.02,">1 nonsynonymous","S29K Y35Q D90G I142L T148I",5
"lib1","SARS-CoV-2","AACCTGGTTATACGTA",4,65.7,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G83V R136T Y165E",3
"lib1","SARS-CoV-2","AACCTGGTTGCAATAT",4,114.5,10.88,0.11,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACCTGTACACAAAGA",5,70.48,9.61,-1.16,0.12,1.94,1.04,0.01,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","AACCTGTGATCTTTAT",2,25.52,7.03,-3.73,0.3,1.5,1.1,0.02,">1 nonsynonymous","G9E A14S W23S G83R D90N L122S",6
"lib1","SARS-CoV-2","AACCTGTGCATCCGGT",9,17.06,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7C A14S S41L K132R L183P",5
"lib1","SARS-CoV-2","AACCTGTGGAGAAGTA",5,19.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F44T D59R V77W A89S G116W",5
"lib1","SARS-CoV-2","AACCTGTGTTATGTGA",5,8.83,6.27,-4.49,0.94,1.5,1.22,0.04,">1 nonsynonymous","T3I T55Y Y91P Y119S",4
"lib1","SARS-CoV-2","AACCTGTTAATTCTGA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A89* Y123T C150G",3
"lib1","SARS-CoV-2","AACCTGTTCACTTTGC",3,17.73,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","Y21K W106Y L187P",3
"lib1","SARS-CoV-2","AACCTTAAAGGCATTA",8,1.86,NA,NA,NA,NA,NA,NA,"stop","L5E N30* T170K",3
"lib1","SARS-CoV-2","AACCTTAACTATCCAC",1,2.26,NA,NA,NA,NA,NA,NA,"stop","L5W V37N A89* P96L V173G L188N",6
"lib1","SARS-CoV-2","AACCTTACAGTTAGGA",1,12.05,10.2,-0.57,0.11,2.87,1.05,0.01,">1 nonsynonymous","R27F S108A",2
"lib1","SARS-CoV-2","AACCTTACATCAATTG",2,0.86,NA,NA,NA,NA,NA,NA,"stop","V32W D98A W106* Y119Q T148L P161F",6
"lib1","SARS-CoV-2","AACCTTACCTGCACCG",10,147.37,9.53,-1.24,0.09,2.77,1.1,0,">1 nonsynonymous","G152I F156L",2
"lib1","SARS-CoV-2","AACCTTACGAATTTAC",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117F T140V",2
"lib1","SARS-CoV-2","AACCTTACGCATGCAC",13,185.22,9.86,-0.91,0.07,2.27,1.04,0,">1 nonsynonymous","V32G S69F",2
"lib1","SARS-CoV-2","AACCTTACGTTCTCTT",4,54.08,9.8,-0.96,0.1,2.06,1,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","AACCTTACTAATATAC",2,0.8,NA,NA,NA,NA,NA,NA,"stop","T55P N64* D137W K198A",4
"lib1","SARS-CoV-2","AACCTTACTCATTTAA",5,17.33,7.29,-3.47,0.37,1.5,1.12,0.03,">1 nonsynonymous","A14M G166I L183F",3
"lib1","SARS-CoV-2","AACCTTAGAATCCCAT",1,8.86,10.77,0,0.11,2.89,1.09,0.01,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AACCTTAGTCACTAAC",1,18.65,6,-4.76,1.08,1.5,1.18,0.02,">1 nonsynonymous","D97Q N107D Y119M E154L",4
"lib1","SARS-CoV-2","AACCTTATAAATATTT",2,44.12,10.61,-0.16,0.03,2.94,1.01,0,">1 nonsynonymous","A22Q K114R E141H",3
"lib1","SARS-CoV-2","AACCTTATAGAATCTA",3,44.41,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F8N I88K",2
"lib1","SARS-CoV-2","AACCTTATCATAAAAA",7,21.59,8.77,-1.99,0.44,1.5,1,0.08,">1 nonsynonymous","G9Y V103K Y123G F156C T193D",5
"lib1","SARS-CoV-2","AACCTTATTTGCCACT",7,51.49,6.3,-4.46,0.76,1.5,1.23,0.03,">1 nonsynonymous","G74M I80F N92Q D98F G116K P149T",6
"lib1","SARS-CoV-2","AACCTTCATAATTTGA",5,37.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C6M N120F G155Y G174V K198A",5
"lib1","SARS-CoV-2","AACCTTCCAAAGGTAT",1,22.87,9.43,-1.34,0.25,1.57,1.1,0.05,">1 nonsynonymous","F44C D97I F185Y",3
"lib1","SARS-CoV-2","AACCTTCCCTCCTTAA",1,28.27,10.15,-0.61,0.05,2.99,1,0,">1 nonsynonymous","L60V G174E",2
"lib1","SARS-CoV-2","AACCTTCCTAGTGCAT",2,55.74,9.24,-1.53,0.07,2.79,1.13,0,">1 nonsynonymous","D98Y Y119S",2
"lib1","SARS-CoV-2","AACCTTCGGCAAACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65R Y121L",2
"lib1","SARS-CoV-2","AACCTTCTAACGTGTC",1,31.32,9.44,-1.33,0.19,1.82,1.13,0.02,">1 nonsynonymous","G51D T140W",2
"lib1","SARS-CoV-2","AACCTTCTCCCAAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82F D98V",2
"lib1","SARS-CoV-2","AACCTTCTCTCTATTA",2,109.45,10.23,-0.53,0.02,2.86,1.06,0,">1 nonsynonymous","N4D K87M S147E",3
"lib1","SARS-CoV-2","AACCTTCTTAGAATTT",5,52.01,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L60D I88T A105L Y119R",4
"lib1","SARS-CoV-2","AACCTTCTTGCCAATC",3,10.47,10.73,-0.04,0.07,2.95,1.03,0,"1 nonsynonymous","D59G",1
"lib1","SARS-CoV-2","AACCTTGAAAAGACCT",1,39.93,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N58H G86W N92V Y123C Y165R R179S",6
"lib1","SARS-CoV-2","AACCTTGAAACAACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D P96Y L162S",3
"lib1","SARS-CoV-2","AACCTTGAAACGACAA",3,18.9,10.49,-0.28,0.06,2.76,1.09,0,">1 nonsynonymous","I28M Y123T",2
"lib1","SARS-CoV-2","AACCTTGAAATCTAAA",2,10.31,6,-4.76,1.8,3,1.13,0.01,">1 nonsynonymous","S36Q Y50T R127D T148G N157L",5
"lib1","SARS-CoV-2","AACCTTGAACATTATA",6,91.4,10.76,0,0.05,2.87,1.07,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","AACCTTGAACTCTGAG",6,0.59,NA,NA,NA,NA,NA,NA,"stop","F17* A105V F156L L162S",4
"lib1","SARS-CoV-2","AACCTTGAAGATAAAG",3,73.2,10.78,0.01,0.07,2.98,1,0,">1 nonsynonymous","I2L K48Q",2
"lib1","SARS-CoV-2","AACCTTGAAGTAGGCG",3,63.7,10.11,-0.65,0.06,2.86,1.02,0,">1 nonsynonymous","C31V S41C",2
"lib1","SARS-CoV-2","AACCTTGCCCAGCAAA",3,46.99,10.71,-0.06,0.04,2.91,1.05,0,">1 nonsynonymous","L5R S147A",2
"lib1","SARS-CoV-2","AACCTTGGCGGTGAAC",2,8.37,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","F12G N40H G172E",3
"lib1","SARS-CoV-2","AACCTTGGGATTCAGC",5,67.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31S C49D Y119D K128V",4
"lib1","SARS-CoV-2","AACCTTGTCCATAGCA",3,20.26,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","I104H I142N R179Q",3
"lib1","SARS-CoV-2","AACCTTGTGGAGACGT",7,1.22,NA,NA,NA,NA,NA,NA,"stop","G9* K26S",2
"lib1","SARS-CoV-2","AACCTTTAACAACTGA",4,16.63,10.83,0.07,0.05,2.96,1,0,"1 nonsynonymous","N171I",1
"lib1","SARS-CoV-2","AACCTTTATATCTCGC",7,33.39,9.55,-1.22,0.18,1.72,1.08,0.01,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","AACCTTTCAGGTGTTT",1,6.64,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","F8Y V77K N120V L162R",4
"lib1","SARS-CoV-2","AACCTTTCATATTAAG",6,61.48,10.55,-0.21,0.05,2.86,1.03,0,">1 nonsynonymous","F44D N151K",2
"lib1","SARS-CoV-2","AACCTTTCCGTGAATG",3,48.7,10.22,-0.54,0.07,2.81,1.08,0,">1 nonsynonymous","A145G G174S",2
"lib1","SARS-CoV-2","AACCTTTCTCATATAC",3,15.98,10.72,-0.04,0.06,2.93,1,0,">1 nonsynonymous","D59L L122E",2
"lib1","SARS-CoV-2","AACCTTTCTTCGGGGA",2,64.82,10.2,-0.56,0.06,2.82,1.03,0,">1 nonsynonymous","A33S F134S",2
"lib1","SARS-CoV-2","AACCTTTGCCCCAGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V I104L C150I",3
"lib1","SARS-CoV-2","AACCTTTGGCAGTGTA",2,29.01,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F47G D97M V115H L122I S139H T170E",6
"lib1","SARS-CoV-2","AACCTTTTGATAACAT",3,17.15,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","G83R D112R",2
"lib1","SARS-CoV-2","AACCTTTTGTGTGGTG",3,8.22,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","K94G I104T L125V Y175N",4
"lib1","SARS-CoV-2","AACCTTTTTAAAAAAT",3,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V N92S S200M",3
"lib1","SARS-CoV-2","AACGAAAAAATCCAGT",9,68.81,10.25,-0.51,0.04,2.82,1.04,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","AACGAAAAAATTCCCT",7,122.54,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y119Q C158R V173Q T201P",4
"lib1","SARS-CoV-2","AACGAAAAACCATGCC",10,247.2,10.64,-0.12,0.04,2.91,1.06,0,"1 nonsynonymous","L57M",1
"lib1","SARS-CoV-2","AACGAAAAATAGGTGA",1,14.2,6,-4.76,1.25,3,1.11,0.02,">1 nonsynonymous","G83V R127T",2
"lib1","SARS-CoV-2","AACGAAAACAAAGATA",4,75.18,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","L60K D68M Y91R G146A G155E Q176M",6
"lib1","SARS-CoV-2","AACGAAAACAACTAGA",1,6.94,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","L95P V103K",2
"lib1","SARS-CoV-2","AACGAAAACCTAAACT",3,18.26,6,-4.76,2,3,1.14,0,">1 nonsynonymous","D90Y D98N F126G G146R F156D F167L",6
"lib1","SARS-CoV-2","AACGAAAAGCTGAACT",2,46.83,6.82,-3.94,0.57,1.5,1.03,0.06,">1 nonsynonymous","P7H F12N Q176V",3
"lib1","SARS-CoV-2","AACGAAAATTATCGCT",2,48.91,10.61,-0.16,0.04,2.97,1.01,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","AACGAAAATTTAAGTC",4,469.16,10.53,-0.24,0.02,2.9,1.03,0,">1 nonsynonymous","A42T P149D",2
"lib1","SARS-CoV-2","AACGAAACAACGTGAT",3,0.48,NA,NA,NA,NA,NA,NA,"stop","F44L C61V G86R P96* V103E",5
"lib1","SARS-CoV-2","AACGAAACATAGCACT",2,42.28,10.03,-0.74,0.04,2.93,1.02,0,"1 nonsynonymous","Y143W",1
"lib1","SARS-CoV-2","AACGAAACCATTACTC",3,7.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13S G74N S129M Q163L",4
"lib1","SARS-CoV-2","AACGAAAGATACCCTG",1,37.75,10.67,-0.1,0.08,2.89,1.07,0,"1 nonsynonymous","V115A",1
"lib1","SARS-CoV-2","AACGAAAGCAACATAG",3,35.22,9.78,-0.99,0.06,2.92,1.05,0,">1 nonsynonymous","N171L A190T",2
"lib1","SARS-CoV-2","AACGAAAGGACTCATA",5,159.87,10.78,0.02,0.04,2.94,1.04,0,"1 nonsynonymous","N58D",1
"lib1","SARS-CoV-2","AACGAAAGGCGTAGCT",1,13.34,6,-4.76,2,1.5,1.08,0.05,">1 nonsynonymous","V20L G51S F156L P161R",4
"lib1","SARS-CoV-2","AACGAAATAGGTTTTA",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V L60Q",2
"lib1","SARS-CoV-2","AACGAAATATTGTCCA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","S45* N58K T100* L183G",4
"lib1","SARS-CoV-2","AACGAAATCAACGCAA",3,6.47,10.35,-0.41,0.22,2.65,1.37,0.02,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","AACGAAATGTATGAAA",5,36,6,-4.76,1.12,1.5,1.27,0.02,">1 nonsynonymous","S41R D68Q D97C F126A S164I",5
"lib1","SARS-CoV-2","AACGAAATTACAGAAC",5,22.02,9.52,-1.24,0.09,2.73,1.06,0,">1 nonsynonymous","C61S N157D",2
"lib1","SARS-CoV-2","AACGAAATTATAATAG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","N1D V37C A105F Y119*",4
"lib1","SARS-CoV-2","AACGAAATTGCCGAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","I28E S69K Y93* V103R Y123V F160M V173A",7
"lib1","SARS-CoV-2","AACGAACACTAAGGTT",1,0.45,NA,NA,NA,NA,NA,NA,"stop","C6Q V52L D75S C150Y V180W C195*",6
"lib1","SARS-CoV-2","AACGAACAGATCAATC",2,69.34,10.73,-0.03,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGAACAGTTTTATA",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M A42V F99S",3
"lib1","SARS-CoV-2","AACGAACATTCACGTG",2,47.84,6,-4.76,2,3,1.2,0,">1 nonsynonymous","N1M F12N T63N N120T R127P",5
"lib1","SARS-CoV-2","AACGAACCAACGTAAG",4,18.19,6.8,-3.97,0.35,1.5,1.21,0.02,">1 nonsynonymous","A18R W23T S36L V173I",4
"lib1","SARS-CoV-2","AACGAACCACATACGC",8,0.89,NA,NA,NA,NA,NA,NA,"stop","K87N P169L G174D P197*",4
"lib1","SARS-CoV-2","AACGAACCAGGGAGTT",3,17.59,9.71,-1.05,0.07,2.98,1.03,0,">1 nonsynonymous","C61G T170K",2
"lib1","SARS-CoV-2","AACGAACCCGAATATA",1,10.58,10.3,-0.46,0.13,2.96,1.02,0.01,">1 nonsynonymous","G83M I138G",2
"lib1","SARS-CoV-2","AACGAACCCTATTGTT",7,1.11,NA,NA,NA,NA,NA,NA,"stop","G9* S43L P96T N157S",4
"lib1","SARS-CoV-2","AACGAACGACCATCAC",1,37.78,9.89,-0.88,0.07,2.64,1.02,0,">1 nonsynonymous","E10I G116L",2
"lib1","SARS-CoV-2","AACGAACTACAAATTA",4,105.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K132L Y175F R179S",3
"lib1","SARS-CoV-2","AACGAACTCATAGGAT",4,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L I104N L183H",3
"lib1","SARS-CoV-2","AACGAACTCCCTCGCA",2,2.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56G",1
"lib1","SARS-CoV-2","AACGAACTCTCGAAAG",1,0.06,NA,NA,NA,NA,NA,NA,"stop","L5F V20N N30D K48Q Y93L R127M K198*",7
"lib1","SARS-CoV-2","AACGAAGAATTCTAGA",6,98.6,10.65,-0.11,0.04,2.91,1.04,0,">1 nonsynonymous","K87R S129R",2
"lib1","SARS-CoV-2","AACGAAGACAACCTAC",9,32.04,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","C6L A33S V77G C150A G196W",5
"lib1","SARS-CoV-2","AACGAAGACATCAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","D98V G101* Y143*",3
"lib1","SARS-CoV-2","AACGAAGATGCCGCTA",6,94.19,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F8Y A18D R136L G152D N157I G172E",6
"lib1","SARS-CoV-2","AACGAAGATGCTACTA",4,43.89,9.89,-0.88,0.16,1.85,1.15,0.01,">1 nonsynonymous","F8Y F44R F62T",3
"lib1","SARS-CoV-2","AACGAAGCATCCCCGA",2,17.49,10.81,0.05,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGAAGCCCACGAAA",1,16.62,8.67,-2.09,0.36,1.5,1.07,0.06,">1 nonsynonymous","I104S G146R",2
"lib1","SARS-CoV-2","AACGAAGCCCCCGAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V D59F F99D L131M C158A V173T",6
"lib1","SARS-CoV-2","AACGAAGGAGTGTCAA",1,21.85,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F17V R25I G83I D98N",4
"lib1","SARS-CoV-2","AACGAAGGATATATAA",3,39.09,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3I R25D F134C",3
"lib1","SARS-CoV-2","AACGAAGGCTCTCGGA",6,78.57,6,-4.76,1.42,1.5,1.18,0.02,">1 nonsynonymous","I88S Y121L",2
"lib1","SARS-CoV-2","AACGAAGTATTTCACT",10,37.51,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","C6P F47I T55N S113T Y121V",5
"lib1","SARS-CoV-2","AACGAAGTGCACCTAT",2,51.67,8.91,-1.85,0.11,2.81,1.06,0,"1 nonsynonymous","S113V",1
"lib1","SARS-CoV-2","AACGAAGTTAGAAAGG",1,36.87,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y50G K56L",2
"lib1","SARS-CoV-2","AACGAAGTTAGGTTCA",1,7.22,NA,NA,NA,NA,NA,0.44,">1 nonsynonymous","I80W Y143R",2
"lib1","SARS-CoV-2","AACGAATAAAGCCGCA",2,37.97,10.2,-0.56,0.05,2.79,1.03,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","AACGAATAACGAGAAG",6,65.38,10.3,-0.47,0.08,2.79,1.01,0,">1 nonsynonymous","R16T F44L V153H P191I",4
"lib1","SARS-CoV-2","AACGAATAATTGCTGT",1,46.43,8.87,-1.9,0.07,2.79,1.08,0,">1 nonsynonymous","V37I S45A G117R T201R",4
"lib1","SARS-CoV-2","AACGAATAGGAATTCT",1,6.45,6.21,-4.56,1.01,1.5,1.18,0.04,">1 nonsynonymous","F12L V37L N107E E154C",4
"lib1","SARS-CoV-2","AACGAATAGGTAACCT",10,25.88,6,-4.76,2,3,1.19,0,">1 nonsynonymous","N1S R16G K56L G83V N92P N171R",6
"lib1","SARS-CoV-2","AACGAATATTGCCAAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72C P133T",2
"lib1","SARS-CoV-2","AACGAATCAAAATTCA",6,122,10.69,-0.07,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AACGAATCTGTGGATA",1,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L N92A",2
"lib1","SARS-CoV-2","AACGAATGCAAGACTA",2,9.11,10.34,-0.42,0.15,2.75,1.26,0.01,">1 nonsynonymous","L131M V153F",2
"lib1","SARS-CoV-2","AACGAATGCACGTTTG",3,0.85,NA,NA,NA,NA,NA,NA,"stop","G9F R136* T148P",3
"lib1","SARS-CoV-2","AACGAATGCAGAATTG",2,21.94,8.05,-2.72,0.24,2.34,1.16,0.02,">1 nonsynonymous","C150G C158E",2
"lib1","SARS-CoV-2","AACGAATTAACGCTTT",1,32.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86R V173N Y178R",3
"lib1","SARS-CoV-2","AACGAATTGAACCTAA",3,3.81,NA,NA,NA,NA,NA,NA,"stop","C6H N58T Y66*",3
"lib1","SARS-CoV-2","AACGAATTTGTTCCTA",3,11.57,10.58,-0.18,0.09,2.91,1.03,0,">1 nonsynonymous","D98A S200G",2
"lib1","SARS-CoV-2","AACGACAAAATCTTGG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","G146* T201N",2
"lib1","SARS-CoV-2","AACGACAAATTAGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* G83* I88S T201R",4
"lib1","SARS-CoV-2","AACGACAACCTTGTAC",5,3.97,NA,NA,NA,NA,NA,NA,"stop","D97S Y119Q E135*",3
"lib1","SARS-CoV-2","AACGACAACGTAATTC",11,113.99,10.74,-0.02,0.06,2.93,1.03,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","AACGACAAGTCTCACA",7,78.91,10.08,-0.68,0.09,2.38,1.04,0,">1 nonsynonymous","W106K S113A",2
"lib1","SARS-CoV-2","AACGACACACCCCTGG",2,24.95,10.29,-0.47,0.08,2.89,1.02,0,">1 nonsynonymous","N24I C61V",2
"lib1","SARS-CoV-2","AACGACACGACTTTAT",1,41.92,10.73,-0.03,0.05,3,1,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","AACGACAGAGAACGCG",7,23.05,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C6I I104S K132L G174T",4
"lib1","SARS-CoV-2","AACGACAGATAAAAAA",3,40.72,10.5,-0.27,0.05,2.88,1.04,0,">1 nonsynonymous","A14R T63N",2
"lib1","SARS-CoV-2","AACGACATATTCGCGG",6,73.69,10.47,-0.29,0.06,2.97,1,0,">1 nonsynonymous","F134S Q168R Y178H",3
"lib1","SARS-CoV-2","AACGACATTACGGAGA",1,74.09,10.8,0.03,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGACATTGAGTATA",6,61.3,9.73,-1.03,0.11,2.19,1.07,0,"1 nonsynonymous","L162Y",1
"lib1","SARS-CoV-2","AACGACCAACAACCTG",1,2.48,NA,NA,NA,NA,NA,NA,"stop","I88Q E135* G166M",3
"lib1","SARS-CoV-2","AACGACCAATACCAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","D34* Y91V D97L V173I",4
"lib1","SARS-CoV-2","AACGACCCAGTAATAG",3,49.8,7.18,-3.59,0.27,1.79,1.23,0.02,"1 nonsynonymous","Y175T",1
"lib1","SARS-CoV-2","AACGACCCATACCTTT",4,51.25,8.44,-2.32,0.1,2.54,1.17,0,">1 nonsynonymous","Y35P T170C",2
"lib1","SARS-CoV-2","AACGACCCGTCTTCGA",11,44.07,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D112F R127S G155F",3
"lib1","SARS-CoV-2","AACGACCCTATAACTA",3,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T A89R G146F G174V",4
"lib1","SARS-CoV-2","AACGACCGAAAAAATA",3,71.45,8.59,-2.18,0.13,2,1.11,0.01,">1 nonsynonymous","S36F N64L Y121F N171L",4
"lib1","SARS-CoV-2","AACGACCGCCGGTTAA",11,81.81,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33W G83I A89R P96E N157R",5
"lib1","SARS-CoV-2","AACGACCGTACCCACG",1,9.25,9.55,-1.21,0.33,1.89,1.06,0.06,">1 nonsynonymous","C6F T85S F185V",3
"lib1","SARS-CoV-2","AACGACGAATAGATAG",3,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L V71R",2
"lib1","SARS-CoV-2","AACGACGACCCTAAAA",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E T55I I80K",3
"lib1","SARS-CoV-2","AACGACGAGCCTAAAT",2,1.3,NA,NA,NA,NA,NA,NA,"stop","I80* Y119* N151L",3
"lib1","SARS-CoV-2","AACGACTAACATTCGA",25,32.68,8.85,-1.92,0.12,1.82,1.15,0.01,">1 nonsynonymous","S108I Q163Y T201L",3
"lib1","SARS-CoV-2","AACGACTAATAAAGAC",1,50.73,9.99,-0.78,0.04,2.84,1.1,0,">1 nonsynonymous","R78Y A145V N171Q",3
"lib1","SARS-CoV-2","AACGACTAATGTAAAA",1,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y W106A Q144M Q176T",4
"lib1","SARS-CoV-2","AACGACTATACAGTCA",1,28.91,10.65,-0.12,0.05,2.98,1,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","AACGACTCAACGAAAT",6,95.71,10.66,-0.11,0.07,2.91,1.06,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","AACGACTCCTTGTAAA",2,80.21,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T100P Y175A",2
"lib1","SARS-CoV-2","AACGACTGCTAAAAGC",3,56.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50S I138C Y159V",3
"lib1","SARS-CoV-2","AACGACTGTACAATAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","I28* S43Y L131E T201S",4
"lib1","SARS-CoV-2","AACGAGAAAAAATTGT",6,25.84,6.2,-4.56,1.09,1.5,1.22,0.05,">1 nonsynonymous","S53L L125V R179M",3
"lib1","SARS-CoV-2","AACGAGAAACTGATCA",2,31.11,10.73,-0.03,0.05,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AACGAGAAGAAGATAA",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D P82T L95G G155S",4
"lib1","SARS-CoV-2","AACGAGAATAAAAGAG",1,12.02,9.63,-1.13,0.3,1.5,1,0.06,">1 nonsynonymous","Y50K T201Q",2
"lib1","SARS-CoV-2","AACGAGACAATTTGAC",2,73.35,10.65,-0.12,0.04,2.91,1.03,0,"1 nonsynonymous","G196I",1
"lib1","SARS-CoV-2","AACGAGACACATAAAT",1,20.53,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","R27L D34V V103R",3
"lib1","SARS-CoV-2","AACGAGACAGGTTCAA",3,70.35,10.79,0.03,0.06,2.88,1.06,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","AACGAGACATCTACCC",8,73.95,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","L95K W106F",2
"lib1","SARS-CoV-2","AACGAGACATGTACGT",5,14.07,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","T3L A14N L60I K94N Y165N",5
"lib1","SARS-CoV-2","AACGAGAGAAGGATAT",3,63.5,9.06,-1.7,0.07,2.74,1.08,0,">1 nonsynonymous","A42G Y119L P149V",3
"lib1","SARS-CoV-2","AACGAGAGGATTCACT",2,15.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S29T S36N G86R Y91K W106G F156L L188T K198T",8
"lib1","SARS-CoV-2","AACGAGATACATACTA",4,40.71,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F12P R27N N64L N120F G166C",5
"lib1","SARS-CoV-2","AACGAGATCGCCTTAA",2,12.28,10.71,-0.05,0.14,2.87,1,0.01,">1 nonsynonymous","P54H A81K Q168H",3
"lib1","SARS-CoV-2","AACGAGCCCAACGATT",3,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T C102R K132L T148R",4
"lib1","SARS-CoV-2","AACGAGCCGTCACAAA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","K114S Y121* L131*",3
"lib1","SARS-CoV-2","AACGAGCGCCTCTCGT",2,79.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S43Y I88C P96S Y143V Q176R",5
"lib1","SARS-CoV-2","AACGAGCTGGGAGCCG",3,1.81,NA,NA,NA,NA,NA,NA,"stop","Y91* Y159V G166P",3
"lib1","SARS-CoV-2","AACGAGCTTGCTAAAA",9,1998.55,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","A42Y C150N F160V",3
"lib1","SARS-CoV-2","AACGAGGACAAGGATA",3,14.19,6.37,-4.39,0.79,1.5,1.2,0.04,">1 nonsynonymous","F8R K48T L57C Y91L",4
"lib1","SARS-CoV-2","AACGAGGACAAGTATA",1,48.14,10.68,-0.09,0.04,2.92,1.04,0,">1 nonsynonymous","F62L D97I",2
"lib1","SARS-CoV-2","AACGAGGCAGTAGACA",4,55.59,10.89,0.13,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGAGGTGCCCTAAT",2,112.48,9.85,-0.91,0.06,2.81,1.05,0,">1 nonsynonymous","L125V P149T",2
"lib1","SARS-CoV-2","AACGAGTAAAGATGAC",1,44.96,10.74,-0.02,0.05,2.94,1.02,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","AACGAGTAACCCTAGC",9,146.75,10.26,-0.5,0.04,2.84,1.05,0,">1 nonsynonymous","G9V T15P G155A",3
"lib1","SARS-CoV-2","AACGAGTAAGTCCTGT",7,69.26,9.25,-1.51,0.2,1.5,1.06,0.02,">1 nonsynonymous","A14G A33S R127K",3
"lib1","SARS-CoV-2","AACGAGTACCCACTCA",8,103.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36E D68T Y121K K128L",4
"lib1","SARS-CoV-2","AACGAGTATGTGATAG",7,37.85,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y21Q A81V P96Q I142N",4
"lib1","SARS-CoV-2","AACGAGTCACTATAAT",2,26.9,10.61,-0.15,0.08,2.92,1.06,0,">1 nonsynonymous","N120G L187W",2
"lib1","SARS-CoV-2","AACGAGTGGGCTAAGC",4,21.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3V E10V V77A E135L",4
"lib1","SARS-CoV-2","AACGATAAAAAATTTT",3,41.68,9.59,-1.18,0.08,2.75,1.12,0,">1 nonsynonymous","C61S N118H",2
"lib1","SARS-CoV-2","AACGATAAAATGTTAT",6,61.56,10.75,-0.01,0.07,2.82,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","AACGATAAATAGTAAA",1,21.59,10.81,0.04,0.13,2.96,1.03,0.01,"1 nonsynonymous","K26R",1
"lib1","SARS-CoV-2","AACGATAACCCCTTCA",3,0.83,NA,NA,NA,NA,NA,NA,"stop","F44W V71* N92R",3
"lib1","SARS-CoV-2","AACGATAACGAATTTG",7,174.49,8.31,-2.46,0.15,2.35,1.11,0.01,">1 nonsynonymous","S29P N157R P197H",3
"lib1","SARS-CoV-2","AACGATAATAACCCCT",1,38.8,9.9,-0.86,0.07,2.61,1.06,0,">1 nonsynonymous","F62S D90F",2
"lib1","SARS-CoV-2","AACGATAATATCTATA",11,124.73,10.4,-0.37,0.02,2.92,1.01,0,"1 nonsynonymous","N107C",1
"lib1","SARS-CoV-2","AACGATACGACATTAT",2,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I D68Q A81V",3
"lib1","SARS-CoV-2","AACGATACGAGAGTTA",1,11.91,6.18,-4.58,0.81,1.52,1.19,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","AACGATACGATTCCTA",2,20.99,9.48,-1.29,0.18,2.03,1.09,0.02,">1 nonsynonymous","F99L G174W",2
"lib1","SARS-CoV-2","AACGATACGTAGCATT",1,21.01,10.21,-0.55,0.06,2.82,1,0,">1 nonsynonymous","N58Y D90S",2
"lib1","SARS-CoV-2","AACGATACTTACTCGT",8,37.2,6.02,-4.74,1.35,1.5,1.21,0.03,">1 nonsynonymous","L95P N120D P149G",3
"lib1","SARS-CoV-2","AACGATAGATCCTCTA",1,22.01,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y93T A145G",2
"lib1","SARS-CoV-2","AACGATAGTGGATCGT",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P F12S Q84L K94Q E141K",5
"lib1","SARS-CoV-2","AACGATATAACAAATA",9,126.56,10.19,-0.58,0.06,2.5,1.02,0,">1 nonsynonymous","S45H S69Y F160S",3
"lib1","SARS-CoV-2","AACGATATATCGGAAC",4,110.44,10.8,0.04,0.1,2.85,1.1,0,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","AACGATATCAAAACAC",4,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110D F126Q",2
"lib1","SARS-CoV-2","AACGATATGGATATAG",5,95.19,9.67,-1.1,0.23,1.51,1.13,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","AACGATATTAAGTAAT",4,62.67,9.14,-1.63,0.12,2.31,1.17,0.01,">1 nonsynonymous","A33L R127G F156H P191H",4
"lib1","SARS-CoV-2","AACGATCAACGCTTCT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib1","SARS-CoV-2","AACGATCAGTACTTAT",1,551.44,10.67,-0.09,0.04,2.91,1.04,0,">1 nonsynonymous","D90R T148S",2
"lib1","SARS-CoV-2","AACGATCAGTGCTCAC",4,84.06,10.68,-0.09,0.04,2.91,1.03,0,"1 nonsynonymous","D90A",1
"lib1","SARS-CoV-2","AACGATCTATACACTA",2,25.22,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","N58R L95F T100F",3
"lib1","SARS-CoV-2","AACGATCTATTGTAGT",3,37.28,10.95,0.19,0.1,2.9,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGATGGGTTCCAGG",1,2.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","AACGATGTAAACTTGC",3,132.86,10.45,-0.31,0.03,2.89,1.02,0,">1 nonsynonymous","D98V Q144A",2
"lib1","SARS-CoV-2","AACGATGTACCGATAG",6,99.48,10.2,-0.56,0.07,2.43,1.02,0,">1 nonsynonymous","Y50F D59E S139Y",3
"lib1","SARS-CoV-2","AACGATGTCTACATAA",7,104.03,9.75,-1.02,0.1,2.2,1.12,0,">1 nonsynonymous","S36L D98C F160V",3
"lib1","SARS-CoV-2","AACGATGTCTGAAAAT",5,13.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C S19K V182K",3
"lib1","SARS-CoV-2","AACGATTAGAAGAAGG",6,0.16,NA,NA,NA,NA,NA,NA,"stop","C6Y L60* D112R Y123T C150K",5
"lib1","SARS-CoV-2","AACGATTAGTTTATTA",1,1.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","AACGATTCACGCTTCA",3,27.36,10.13,-0.63,0.07,2.8,1,0,">1 nonsynonymous","I28L V52K",2
"lib1","SARS-CoV-2","AACGATTCCGAATAAT",3,35.31,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","G9L F44R G83P P96R",4
"lib1","SARS-CoV-2","AACGATTTAACTTCCC",2,10.54,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I80L Y91S F160T",3
"lib1","SARS-CoV-2","AACGATTTAATTCTAG",8,68,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P7H W23R D112Q",3
"lib1","SARS-CoV-2","AACGATTTACCCCAAA",10,91.74,10.73,-0.04,0.03,2.91,1.03,0,">1 nonsynonymous","I2V D97F",2
"lib1","SARS-CoV-2","AACGATTTCAAATTTA",5,56.01,10.83,0.07,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGATTTCGTTATCA",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89K T201M",2
"lib1","SARS-CoV-2","AACGATTTGGTATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12G F44* C49P",3
"lib1","SARS-CoV-2","AACGCAAAACATGGTA",6,99.99,10.66,-0.1,0.05,2.9,1.07,0,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","AACGCAAACCTACCCA",4,0.18,NA,NA,NA,NA,NA,NA,"stop","G9K E10* V37R L122F A145P F160D",6
"lib1","SARS-CoV-2","AACGCAAATCAACCCA",2,31.21,10.58,-0.19,0.06,2.95,1.04,0,">1 nonsynonymous","S43Y N64S K114T A145S T201M",5
"lib1","SARS-CoV-2","AACGCAAATCAACGAA",13,130.57,10.33,-0.44,0.08,2.74,1.21,0,">1 nonsynonymous","N40R D90L",2
"lib1","SARS-CoV-2","AACGCAACAGAACTGT",3,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N K56V",2
"lib1","SARS-CoV-2","AACGCAAGAAAATCTT",1,60.28,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C61L L122F P177M",3
"lib1","SARS-CoV-2","AACGCAAGACTGCCAA",2,33.29,10.55,-0.22,0.06,2.95,1.05,0,"1 nonsynonymous","T148C",1
"lib1","SARS-CoV-2","AACGCAAGATCCCGTG",2,17.06,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5I K26R G86L L95K Y159N S200F",6
"lib1","SARS-CoV-2","AACGCAAGGCAGGATC",8,2.02,NA,NA,NA,NA,NA,NA,"stop","S36* G86P I142H L183A",4
"lib1","SARS-CoV-2","AACGCAAGTACACAAT",2,8.71,8.17,-2.59,0.25,1.88,1.25,0.02,">1 nonsynonymous","G9K S41R Q84L G166V",4
"lib1","SARS-CoV-2","AACGCAATTCTGGTTG",1,13.55,8.37,-2.39,0.2,1.51,1.06,0.01,">1 nonsynonymous","F8Y A81F L111I E141L",4
"lib1","SARS-CoV-2","AACGCACACAACCATG",1,10.16,10.66,-0.11,0.24,2.75,1.09,0.07,"1 nonsynonymous","G9H",1
"lib1","SARS-CoV-2","AACGCACATACCGACC",3,8.96,10.08,-0.69,0.5,2.24,1,0.04,">1 nonsynonymous","N1D S41R I104C V115L F185N",5
"lib1","SARS-CoV-2","AACGCACGAAAAATTG",2,0,NA,NA,NA,NA,NA,NA,"stop","E10D K87* G101L",3
"lib1","SARS-CoV-2","AACGCACGCACTGAAT",3,24.22,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64Y N107S D112V P149S S164F T170I",6
"lib1","SARS-CoV-2","AACGCACGGCTGTGGA",8,98.59,9.79,-0.97,0.08,2.53,1.04,0,">1 nonsynonymous","G116F Q144H",2
"lib1","SARS-CoV-2","AACGCACGGTAAAACC",2,6.7,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","F44T I80S K199N",3
"lib1","SARS-CoV-2","AACGCACTCCACAAAA",9,132.09,10.86,0.09,0.05,2.92,1.05,0,">1 nonsynonymous","N64M N171Y",2
"lib1","SARS-CoV-2","AACGCACTTTTCCAAA",5,105.76,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","T63E S113H P177C",3
"lib1","SARS-CoV-2","AACGCACTTTTGGAGG",3,41.64,10.12,-0.64,0.08,2.75,1.06,0,">1 nonsynonymous","A14G C61D T85S R136K",4
"lib1","SARS-CoV-2","AACGCAGAACCACTCT",2,68.71,10.67,-0.1,0.04,2.94,1.03,0,"1 nonsynonymous","P169T",1
"lib1","SARS-CoV-2","AACGCAGAATGTTTAC",6,14.77,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49Y F99K N107I S184C T201A",5
"lib1","SARS-CoV-2","AACGCAGAGCCGATTA",2,38.25,10.55,-0.21,0.07,2.93,1.1,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","AACGCAGCCACTGACG",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q F99I N120R",3
"lib1","SARS-CoV-2","AACGCAGGGTTACATA",7,118.47,9.03,-1.74,0.15,1.56,1.1,0.01,">1 nonsynonymous","A89G N120I T148I",3
"lib1","SARS-CoV-2","AACGCAGGTTGCAATA",6,92.65,10.11,-0.65,0.06,2.89,1.04,0,">1 nonsynonymous","T55A T100V F156T",3
"lib1","SARS-CoV-2","AACGCATAAAAAATAT",6,0.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82V",1
"lib1","SARS-CoV-2","AACGCATAAAAAGATA",7,21.81,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","D68R Y143N",2
"lib1","SARS-CoV-2","AACGCATAATCATAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K114N L122A T140K G152* A192M",5
"lib1","SARS-CoV-2","AACGCATATAAAGAAG",5,43.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N40A A105I F126A C150S P177V",5
"lib1","SARS-CoV-2","AACGCATATCAGTAGC",7,122.56,8.44,-2.32,0.13,2.5,1.08,0.01,">1 nonsynonymous","Y123L G166E V173R",3
"lib1","SARS-CoV-2","AACGCATATTCAGAGT",1,21.23,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","D59N V103D G117V L125P Y143C F167I",6
"lib1","SARS-CoV-2","AACGCATCACTAATAC",1,7.03,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A105T F134Y G172R",3
"lib1","SARS-CoV-2","AACGCATCATTGGGCT",1,30.2,6.49,-4.27,0.77,1.5,1.29,0.04,">1 nonsynonymous","A14S Y50R",2
"lib1","SARS-CoV-2","AACGCATCCAGTTCAA",5,147.79,8.27,-2.49,0.15,2.02,1.16,0.01,">1 nonsynonymous","K26M T63G Y175R T201N",4
"lib1","SARS-CoV-2","AACGCATCGAATCCGT",20,78.95,6.14,-4.62,0.49,1.5,1.15,0.01,"1 nonsynonymous","I88P",1
"lib1","SARS-CoV-2","AACGCATGCGAAGTCC",1,15.86,10.38,-0.38,0.1,2.92,1,0.01,">1 nonsynonymous","A14D T201M",2
"lib1","SARS-CoV-2","AACGCATTAAACCTAC",12,202.13,10.67,-0.1,0.07,2.75,1.09,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","AACGCATTAAGAACCT",2,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G N107L T140V V153I",4
"lib1","SARS-CoV-2","AACGCATTCAAAGATC",1,41.71,10.4,-0.36,0.04,2.8,1.08,0,"1 nonsynonymous","E186V",1
"lib1","SARS-CoV-2","AACGCCAACAAATTTA",2,31.58,9.11,-1.65,0.07,2.88,1.09,0,">1 nonsynonymous","N64S Y119D",2
"lib1","SARS-CoV-2","AACGCCAACGAAAAAT",2,5.85,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1V T63S D98K I104H K114T I138L",6
"lib1","SARS-CoV-2","AACGCCAGCAGATAAA",4,6.17,10.71,-0.06,0.12,2.91,1.1,0.01,">1 nonsynonymous","N64S T140R",2
"lib1","SARS-CoV-2","AACGCCATCATTGTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","N1W V11S C49* S113K N120A G146P",6
"lib1","SARS-CoV-2","AACGCCATCGAATAAT",8,91.36,8.97,-1.79,0.09,1.72,1.07,0,">1 nonsynonymous","F8I L57T N120I",3
"lib1","SARS-CoV-2","AACGCCCAGATATCGG",3,27.14,10.26,-0.5,0.07,2.79,1.04,0,">1 nonsynonymous","G83F A89V",2
"lib1","SARS-CoV-2","AACGCCCATGAAGCTT",2,13.16,9.98,-0.79,0.1,2.78,1,0,">1 nonsynonymous","Q144Y G152N S200N",3
"lib1","SARS-CoV-2","AACGCCCCAGAGTTGC",6,73.39,10.24,-0.52,0.04,2.91,1.03,0,"1 nonsynonymous","L162F",1
"lib1","SARS-CoV-2","AACGCCCCCATGGCCT",7,89.96,10.58,-0.18,0.02,2.93,1.04,0,">1 nonsynonymous","G9W N120S",2
"lib1","SARS-CoV-2","AACGCCCTAAGGCGAT",5,76.01,10.84,0.07,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGCCCTCCTTAAAA",4,36.07,6.05,-4.71,1.05,1.5,1.17,0.03,">1 nonsynonymous","I2T C61S Y93S A105T N118P P149M",6
"lib1","SARS-CoV-2","AACGCCGCTGCCTGAG",3,27.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Q79T A81P",2
"lib1","SARS-CoV-2","AACGCCGTTTCAGGCG",3,2.68,NA,NA,NA,NA,NA,NA,"stop","F44C K87* G116* Y178P",4
"lib1","SARS-CoV-2","AACGCCTAAGCCAAGA",6,25.92,8.04,-2.72,0.25,1.5,1.15,0.02,">1 nonsynonymous","Y21H L38S K128L",3
"lib1","SARS-CoV-2","AACGCCTCAGTTGATC",7,70.26,9.68,-1.08,0.22,1.5,1.04,0.02,">1 nonsynonymous","P96L N120A",2
"lib1","SARS-CoV-2","AACGCCTTCCAGCGCA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","T46* G101Y F160P Y165I",4
"lib1","SARS-CoV-2","AACGCCTTGAGCATAC",6,66.89,9.72,-1.04,0.07,2.15,1.04,0,">1 nonsynonymous","P82K K114E P197T",3
"lib1","SARS-CoV-2","AACGCGAAAGACTATT",3,55.94,8.67,-2.09,0.18,1.63,1.18,0.01,">1 nonsynonymous","T55D N92D",2
"lib1","SARS-CoV-2","AACGCGAAATTATTTG",1,9.2,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","V11S S45M V77S",3
"lib1","SARS-CoV-2","AACGCGAACAGGATGT",1,21.97,8.77,-1.99,0.21,2.18,1.22,0.02,">1 nonsynonymous","K87R N107I",2
"lib1","SARS-CoV-2","AACGCGAACGAAATAC",5,20.98,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","V182K",1
"lib1","SARS-CoV-2","AACGCGAATTAACTAT",1,11.52,6.97,-3.8,0.5,1.5,1.13,0.07,">1 nonsynonymous","D112R F134R I142A",3
"lib1","SARS-CoV-2","AACGCGACCAAAGAGT",5,65.17,10.02,-0.74,0.08,2.69,1,0,">1 nonsynonymous","G116I E186Y",2
"lib1","SARS-CoV-2","AACGCGAGTTCACCTA",2,18.99,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","S19I R124H C150A V181G",4
"lib1","SARS-CoV-2","AACGCGATTAACTCCT",1,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72W G116A T170L L188P",4
"lib1","SARS-CoV-2","AACGCGATTACAAGGA",3,25.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R T85N P96R R136S",4
"lib1","SARS-CoV-2","AACGCGCATATTTTGC",7,58.34,10.63,-0.14,0.1,2.73,1,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","AACGCGCCTATAACCG",1,11.1,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S29R P96H C158P Y165L",4
"lib1","SARS-CoV-2","AACGCGCGAGAGACAT",4,55.19,10.85,0.08,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGCGCGGTCGGTCA",3,12.85,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A14L C49N K56A D90I D112L",5
"lib1","SARS-CoV-2","AACGCGGACTAGACAA",2,70.81,10.8,0.04,0.08,2.83,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGCGGATGTGGCAA",2,17.2,6.54,-4.23,0.47,1.5,1.06,0.03,">1 nonsynonymous","P96L E141V Q176T",3
"lib1","SARS-CoV-2","AACGCGGCTGCCTATC",5,26.04,10.64,-0.13,0.05,2.91,1.03,0,"1 nonsynonymous","F62N",1
"lib1","SARS-CoV-2","AACGCGGCTGGTGTTT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","N4R R16S D59N V115M N120Y L162R T201*",7
"lib1","SARS-CoV-2","AACGCGGGGAGAATGT",3,46.79,10.06,-0.71,0.09,2.63,1.07,0.01,">1 nonsynonymous","N4V A42L C61G",3
"lib1","SARS-CoV-2","AACGCGTAGACAACAT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I F134S",2
"lib1","SARS-CoV-2","AACGCGTGAGTTACTT",8,136.66,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A14L Y159R Y178S",3
"lib1","SARS-CoV-2","AACGCGTTCAACGTTC",1,74.59,8.85,-1.91,0.09,2.38,1.14,0,">1 nonsynonymous","C6G Y119R S129H S147W",4
"lib1","SARS-CoV-2","AACGCGTTGCTTATAA",5,44.73,7.48,-3.29,0.25,1.61,1.16,0.02,">1 nonsynonymous","Y35L C61K D68E Q144P V173D",5
"lib1","SARS-CoV-2","AACGCGTTTTAGGAAA",4,16.39,10.09,-0.67,0.15,2.63,1.06,0.01,">1 nonsynonymous","T55C Y66C",2
"lib1","SARS-CoV-2","AACGCTAAAAGCCCCA",11,194.06,10.23,-0.53,0.06,2.76,1.07,0,">1 nonsynonymous","D34C T201N",2
"lib1","SARS-CoV-2","AACGCTAAACTACACA",4,0,NA,NA,NA,NA,NA,NA,"stop","A89L G166*",2
"lib1","SARS-CoV-2","AACGCTAACAGCGAAC",2,6,8.95,-1.81,0.18,1.9,1.06,0.01,">1 nonsynonymous","A89F Y121L",2
"lib1","SARS-CoV-2","AACGCTAAGCAATGTA",5,27.08,10.36,-0.41,0.12,2.84,1,0.01,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","AACGCTAAGCCCCTTA",1,4.86,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACGCTACAATTCGGT",6,158.9,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8K L38H R124Q R136H",4
"lib1","SARS-CoV-2","AACGCTACCTATCCCA",7,73.23,10.72,-0.04,0.06,2.89,1.08,0,">1 nonsynonymous","V37F F44A T201L",3
"lib1","SARS-CoV-2","AACGCTATTCACTTAT",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S L57I D90G",3
"lib1","SARS-CoV-2","AACGCTCAGAAATAAA",1,6.9,8.15,-2.61,0.17,2.06,1.03,0.01,">1 nonsynonymous","N118M L125R S184K",3
"lib1","SARS-CoV-2","AACGCTCATAATTCTT",14,163.54,10.29,-0.48,0.03,2.88,1.03,0,">1 nonsynonymous","N30D R127K",2
"lib1","SARS-CoV-2","AACGCTCATACGTAAA",1,58.71,10.04,-0.72,0.03,2.82,1.05,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","AACGCTCTTCAAATAT",6,33.14,7.59,-3.18,0.34,1.5,1.15,0.03,">1 nonsynonymous","N1H Y35E D97I G152V",4
"lib1","SARS-CoV-2","AACGCTGACCCGTCGA",1,10.51,10.47,-0.3,0.18,2.57,1,0.01,">1 nonsynonymous","N4L S147Y G152K",3
"lib1","SARS-CoV-2","AACGCTTAGAATATTA",4,33.47,9.78,-0.99,0.16,1.68,1.13,0.01,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","AACGCTTATACAGGGA",1,11.02,10.49,-0.27,0.12,2.58,1.04,0.01,">1 nonsynonymous","V37I K48H S129F",3
"lib1","SARS-CoV-2","AACGCTTCCCAGGGTG",3,0,NA,NA,NA,NA,NA,NA,"stop","V37I V103R K128P Y165N F185*",5
"lib1","SARS-CoV-2","AACGCTTCCGAGACTT",3,86.06,10.72,-0.05,0.04,2.96,1,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","AACGCTTCCGGTTGTG",7,93.3,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S53V Q84L N107F",3
"lib1","SARS-CoV-2","AACGCTTGAACAATAA",7,213.98,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C6E P54M Y119A R127S",4
"lib1","SARS-CoV-2","AACGCTTTAACTTCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","P54V G86C L131* C158W",4
"lib1","SARS-CoV-2","AACGGAAAACGAATTA",7,1.4,NA,NA,NA,NA,NA,NA,"stop","A18Y N118F I142Y T148S N151*",5
"lib1","SARS-CoV-2","AACGGAAAACTTAATT",1,9996.15,10.18,-0.58,0.04,2.73,1,0,"1 nonsynonymous","D34P",1
"lib1","SARS-CoV-2","AACGGAAAATTCCAAA",2,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V L95N D98G N118L",4
"lib1","SARS-CoV-2","AACGGAAACGGCCCCC",1,33.15,10.71,-0.05,0.11,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AACGGAAACGGGGACT",2,61,6.03,-4.73,1.14,1.5,1.18,0.03,">1 nonsynonymous","N40R G172E",2
"lib1","SARS-CoV-2","AACGGAAAGAATTGCC",3,1.57,NA,NA,NA,NA,NA,NA,"stop","N40L V180*",2
"lib1","SARS-CoV-2","AACGGAAAGCAGAATT",2,17.31,6,-4.76,2,3,1.03,0,">1 nonsynonymous","I28V Y50R N64L A81G Y91M",5
"lib1","SARS-CoV-2","AACGGAAATGATCTTG",1,27.83,9.77,-0.99,0.11,2.19,1.06,0.01,">1 nonsynonymous","I2F G9L D97C S147F",4
"lib1","SARS-CoV-2","AACGGAACAAAACCCA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N64K K94*",2
"lib1","SARS-CoV-2","AACGGAACCCAGAAGC",7,27.05,9.63,-1.14,0.14,2.04,1.08,0.01,">1 nonsynonymous","D34F N64L",2
"lib1","SARS-CoV-2","AACGGAAGGAGGTCCA",3,26.82,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L5R Y35V I72R Y121P",4
"lib1","SARS-CoV-2","AACGGAAGGTTCTAAT",4,45.78,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","R25V A33H I88M G155C",4
"lib1","SARS-CoV-2","AACGGAATAACACAAA",4,14.14,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L95E C195N",2
"lib1","SARS-CoV-2","AACGGAATCAAAACGG",16,193.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14Y R16N R25P S113N",4
"lib1","SARS-CoV-2","AACGGAATCTGGCGCA",16,72.84,10.72,-0.05,0.07,2.87,1.06,0,"1 nonsynonymous","R27V",1
"lib1","SARS-CoV-2","AACGGAATGTTAAAGT",2,23.31,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","N13A V32E K87D D97Y D112E",5
"lib1","SARS-CoV-2","AACGGAATTACGCTGA",4,22.63,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","W23A L131G G174R",3
"lib1","SARS-CoV-2","AACGGAATTTGAACGG",5,58.16,10.11,-0.65,0.1,2.65,1,0,">1 nonsynonymous","T85F Y121M",2
"lib1","SARS-CoV-2","AACGGACAAGCGGCTC",10,117.72,6.15,-4.61,0.7,1.5,1.19,0.01,">1 nonsynonymous","T46S D97N D112V Y123V",4
"lib1","SARS-CoV-2","AACGGACACCGTCTTT",3,75.85,9.95,-0.81,0.04,2.84,1.02,0,">1 nonsynonymous","D90E A145I",2
"lib1","SARS-CoV-2","AACGGACAGTAAATAC",1,7.33,6,-4.76,1.68,3,1.04,0.01,">1 nonsynonymous","F47L D90P",2
"lib1","SARS-CoV-2","AACGGACATAAATTAT",5,20.85,6.41,-4.35,0.39,1.5,1.09,0.01,">1 nonsynonymous","S19K K94L K132F F160H",4
"lib1","SARS-CoV-2","AACGGACCACCTAATG",3,0.43,NA,NA,NA,NA,NA,NA,"stop","L60N L125*",2
"lib1","SARS-CoV-2","AACGGACCATCCGAGG",21,181.3,10.16,-0.6,0.06,2.52,1.03,0,"1 nonsynonymous","D34I",1
"lib1","SARS-CoV-2","AACGGACGGTAGACTT",1,8.21,8.89,-1.87,0.34,1.5,1,0.05,">1 nonsynonymous","C61G D90T G152L",3
"lib1","SARS-CoV-2","AACGGAGAATGAAGTG",5,37.84,10.23,-0.54,0.16,1.94,1.03,0.01,">1 nonsynonymous","V32P D90T",2
"lib1","SARS-CoV-2","AACGGAGACACATAAA",5,95.44,10.05,-0.72,0.06,2.55,1.08,0,">1 nonsynonymous","A105Y G152D K198A",3
"lib1","SARS-CoV-2","AACGGAGGCAGTAGAC",8,54.16,8.28,-2.49,0.15,2,1.07,0.01,"1 nonsynonymous","S108Y",1
"lib1","SARS-CoV-2","AACGGAGTATATGTAA",1,13.31,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8P G83D Y91F W106G Y121V",5
"lib1","SARS-CoV-2","AACGGAGTGTCACGAC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","T3R V37L T148F P197*",4
"lib1","SARS-CoV-2","AACGGATAAAAATCAA",1,26.35,10.36,-0.4,0.04,2.94,1.06,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","AACGGATAAAACATAC",2,57.38,7.54,-3.23,0.27,1.5,1.13,0.02,">1 nonsynonymous","V37E R136S G146F",3
"lib1","SARS-CoV-2","AACGGATAAAATCCAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","V65M A89I L122*",3
"lib1","SARS-CoV-2","AACGGATAACTTTAAC",2,1.43,NA,NA,NA,NA,NA,NA,"stop","S41V D90* T201P",3
"lib1","SARS-CoV-2","AACGGATCTCGTGGAT",3,75.62,10.33,-0.43,0.04,2.9,1,0,">1 nonsynonymous","A105G V173F",2
"lib1","SARS-CoV-2","AACGGATCTTAGTTAC",3,1.1,NA,NA,NA,NA,NA,NA,"stop","S45I V103S Y123L Q163* T201Q",5
"lib1","SARS-CoV-2","AACGGATGATCCATAA",2,32.66,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T55G G86D P96A",3
"lib1","SARS-CoV-2","AACGGATGTCACTGAA",1,32.44,10.63,-0.13,0.05,2.91,1.01,0,">1 nonsynonymous","Y91N T148Q",2
"lib1","SARS-CoV-2","AACGGATTAAATAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10A I28L S43R Y143*",4
"lib1","SARS-CoV-2","AACGGATTAATGCGGA",2,38.32,9.19,-1.57,0.12,2.08,1.09,0.01,">1 nonsynonymous","P54G Q176S",2
"lib1","SARS-CoV-2","AACGGATTATAAGGTA",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52R S200I",2
"lib1","SARS-CoV-2","AACGGCACAAACTAGC",2,57.3,10.41,-0.35,0.05,2.93,1.05,0,"1 nonsynonymous","K87A",1
"lib1","SARS-CoV-2","AACGGCAGATCGCCTC",6,35.46,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K48G R127P",2
"lib1","SARS-CoV-2","AACGGCAGCTCTTAAA",1,59.47,10.69,-0.08,0.08,2.89,1.05,0,"1 nonsynonymous","V37D",1
"lib1","SARS-CoV-2","AACGGCATGCTTCAAG",12,160.39,10.19,-0.57,0.07,2.65,1.05,0,">1 nonsynonymous","D90L D97K",2
"lib1","SARS-CoV-2","AACGGCCATATTAACG",4,7.91,10.63,-0.14,0.14,2.89,1.05,0.01,">1 nonsynonymous","S41N K199Q",2
"lib1","SARS-CoV-2","AACGGCCGAACAACCA",6,5.19,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V103Q N110A N120S S139M L183R",5
"lib1","SARS-CoV-2","AACGGCGAAAGAGGGC",11,6.02,NA,NA,NA,NA,NA,NA,"stop","E141I G172*",2
"lib1","SARS-CoV-2","AACGGCGACTTCATGA",2,37.11,7.87,-2.89,0.17,2.12,1.13,0.01,">1 nonsynonymous","G146P Y175F",2
"lib1","SARS-CoV-2","AACGGCGTAACCATCT",5,0.26,NA,NA,NA,NA,NA,NA,"stop","P7S N30P D97* N109M S139*",5
"lib1","SARS-CoV-2","AACGGCGTTCAATCAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","AACGGCGTTCCGACAT",9,4.05,NA,NA,NA,NA,NA,NA,"stop","G51L D59I V103*",3
"lib1","SARS-CoV-2","AACGGCTATCGCATTC",1,5.57,6.01,-4.75,2,1.5,1.17,0.06,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","AACGGCTTACATTGCT",1,12.36,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","L5G Y121S F134V P177S",4
"lib1","SARS-CoV-2","AACGGCTTCTCATACT",3,31.6,8.79,-1.97,0.28,1.5,1.04,0.03,">1 nonsynonymous","A81Y N120W",2
"lib1","SARS-CoV-2","AACGGGAAAATCCATT",3,65.35,9.55,-1.21,0.24,1.56,1.2,0.02,">1 nonsynonymous","I2T N30I D98R",3
"lib1","SARS-CoV-2","AACGGGAAATCCAGTA",8,144.14,10.31,-0.45,0.04,2.89,1.03,0,">1 nonsynonymous","Y35A E186S T201P",3
"lib1","SARS-CoV-2","AACGGGACTTAGAAAC",1,25.67,10.52,-0.24,0.11,2.95,1.02,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","AACGGGCTTGGCGTTA",1,26.82,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K114S Q176P",2
"lib1","SARS-CoV-2","AACGGGGAGCTCGAGG",4,16.65,6.04,-4.73,0.67,1.5,1.13,0.01,">1 nonsynonymous","I28P G74I",2
"lib1","SARS-CoV-2","AACGGGGCGACCTTAT",7,40.88,8.05,-2.71,0.39,1.5,1.18,0.04,">1 nonsynonymous","P7I N64R V173S",3
"lib1","SARS-CoV-2","AACGGGTACGGTCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L C61* V71L N92E",4
"lib1","SARS-CoV-2","AACGGGTCATAAATTA",1,5.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60E Y93A N107R S139G V173I",5
"lib1","SARS-CoV-2","AACGGGTGATCTCTTG",2,10.61,6.32,-4.44,1.79,3,1.13,0.03,">1 nonsynonymous","I2D G74L V103H Y121A R136L E154S",6
"lib1","SARS-CoV-2","AACGGGTTCTAAAGTA",5,38.09,7.21,-3.55,0.38,1.5,1.24,0.03,">1 nonsynonymous","L5S D98Y S113A Y121T",4
"lib1","SARS-CoV-2","AACGGTAAATAATAAG",2,0.76,NA,NA,NA,NA,NA,NA,"stop","L95V F126V V153F C158*",4
"lib1","SARS-CoV-2","AACGGTAACTACGACC",2,32.48,10.59,-0.18,0.07,2.89,1.03,0,"1 nonsynonymous","E135M",1
"lib1","SARS-CoV-2","AACGGTAATGGAGTGG",2,12.63,10.71,-0.06,0.08,2.99,1,0,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","AACGGTCAGTAGGAGC",2,15.46,10.61,-0.15,0.05,2.92,1,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","AACGGTCATAACAAAT",6,126.62,10.61,-0.15,0.06,2.91,1.05,0,"1 nonsynonymous","L162V",1
"lib1","SARS-CoV-2","AACGGTCCAATTTTCC",6,144.81,10.24,-0.53,0.05,2.87,1,0,">1 nonsynonymous","L60R Y66K L122T",3
"lib1","SARS-CoV-2","AACGGTCGCAAACTGG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","W23* S129A",2
"lib1","SARS-CoV-2","AACGGTCGGTTGGAAC",1,16.58,9.94,-0.82,0.16,2.24,1.05,0.01,">1 nonsynonymous","S36N N58L D98Y",3
"lib1","SARS-CoV-2","AACGGTGAATATAATC",1,67.78,9.99,-0.77,0.06,2.91,1,0,">1 nonsynonymous","D97N Y143L",2
"lib1","SARS-CoV-2","AACGGTGCATGATAAA",6,100.87,9.48,-1.28,0.09,1.95,1.11,0,">1 nonsynonymous","I2W G9P S19Q",3
"lib1","SARS-CoV-2","AACGGTGGTAATGAAA",8,75.59,10.21,-0.56,0.07,2.82,1.07,0,">1 nonsynonymous","D59A T85D",2
"lib1","SARS-CoV-2","AACGGTTACACACAAG",8,250.58,10.23,-0.53,0.03,2.85,1.02,0,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","AACGTAAAACATACAC",5,15.54,8.72,-2.04,0.31,1.5,1,0.03,">1 nonsynonymous","L131S N151S",2
"lib1","SARS-CoV-2","AACGTAAAACTTACCA",2,28.36,8.57,-2.2,0.09,2.93,1.05,0,"1 nonsynonymous","N157F",1
"lib1","SARS-CoV-2","AACGTAAAATTCGTCT",1,0.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11G",1
"lib1","SARS-CoV-2","AACGTAAAATTTGACT",2,62.56,10.66,-0.1,0.04,2.97,1,0,">1 nonsynonymous","E141V E154A",2
"lib1","SARS-CoV-2","AACGTAAACAATGGCT",5,54.84,10.77,0.01,0.09,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTAAAGTACAAAT",5,30.54,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","V103S C158V",2
"lib1","SARS-CoV-2","AACGTAAATTGCACTA",2,11.15,8.84,-1.92,0.07,2.14,1.03,0,">1 nonsynonymous","N24G S43F N64S N118F",4
"lib1","SARS-CoV-2","AACGTAACAAAAAATC",1,40.74,9.41,-1.36,0.05,2.91,1.08,0,">1 nonsynonymous","C61L T170M",2
"lib1","SARS-CoV-2","AACGTAACGCATCATA",3,17.33,9.11,-1.66,0.14,2.92,1.15,0.01,">1 nonsynonymous","G166K L187Q",2
"lib1","SARS-CoV-2","AACGTAACGTTATTTA",3,50.49,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","E10G Y91C C158Y",3
"lib1","SARS-CoV-2","AACGTAATACACCACT",2,27.22,6,-4.76,1.02,3,1.29,0.02,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","AACGTAATAGCTGTAT",9,45.07,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12R A18M D98T L183Y",4
"lib1","SARS-CoV-2","AACGTAATATTTGGTG",6,1.65,NA,NA,NA,NA,NA,NA,"stop","K87G V115* Q163D",3
"lib1","SARS-CoV-2","AACGTAATCTATGCGA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","Y50F N92F G101* G174N T201S",5
"lib1","SARS-CoV-2","AACGTAATGATAACTA",2,34.81,10.85,0.08,0.07,2.93,1,0,">1 nonsynonymous","T3K Y39H K199S",3
"lib1","SARS-CoV-2","AACGTAATGTTACAAT",1,79.99,6.81,-3.96,0.24,1.5,1.14,0.01,">1 nonsynonymous","I142Y Y175E",2
"lib1","SARS-CoV-2","AACGTACAAAATCCGA",1,18.79,10.85,0.09,0.07,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AACGTACAAGGAGAAT",5,144.38,10.74,-0.03,0.06,2.9,1.07,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","AACGTACACTACGACA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W N30W P54W C61Y A81F",5
"lib1","SARS-CoV-2","AACGTACAGCCCTTGC",7,41.7,10.4,-0.36,0.06,2.84,1.08,0,">1 nonsynonymous","L5R Y123W",2
"lib1","SARS-CoV-2","AACGTACATGAGTCCG",4,79.91,8.72,-2.04,0.16,1.76,1.11,0.01,">1 nonsynonymous","S129A S139I A145I",3
"lib1","SARS-CoV-2","AACGTACCATAGACTT",7,101.3,10.75,-0.02,0.06,2.88,1.06,0,"1 nonsynonymous","K56H",1
"lib1","SARS-CoV-2","AACGTACCCAGGATGT",2,50,6.13,-4.64,0.79,1.5,1.17,0.02,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","AACGTACCGCAATCTT",3,77.39,9.46,-1.31,0.15,1.59,1.18,0.01,">1 nonsynonymous","F12I T100I Y178R",3
"lib1","SARS-CoV-2","AACGTACGCCCTTGCC",3,6.81,10,-0.76,0.22,2.68,1.07,0.01,">1 nonsynonymous","F8L F44M L60N",3
"lib1","SARS-CoV-2","AACGTACGTATAAATC",4,92.76,10.79,0.03,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTACTCACAATTC",6,18.5,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","T3G D68K L122E K132L",4
"lib1","SARS-CoV-2","AACGTACTGAGTACGG",3,0,NA,NA,NA,NA,NA,NA,"stop","V77A Y121T K128M Y165*",4
"lib1","SARS-CoV-2","AACGTACTTACACTAT",1,0.18,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACGTAGAACGCGAGG",5,25.95,10.28,-0.49,0.26,1.95,1.02,0.02,">1 nonsynonymous","N24L D97A Y121Q",3
"lib1","SARS-CoV-2","AACGTAGCGTAAGATT",6,77.08,10.64,-0.13,0.05,2.86,1.07,0,">1 nonsynonymous","A81K T85R",2
"lib1","SARS-CoV-2","AACGTAGCTCCCCCAT",6,0.76,NA,NA,NA,NA,NA,NA,"stop","G9T G51Y L60V V77F Q84* V103L",6
"lib1","SARS-CoV-2","AACGTAGTATTTAAGG",7,22.37,7.87,-2.89,0.17,1.87,1.15,0.01,">1 nonsynonymous","N118C G155C",2
"lib1","SARS-CoV-2","AACGTATAAGGCTGCT",2,35.97,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F62A V77C T85P G117T S129M P197D",6
"lib1","SARS-CoV-2","AACGTATATAAACCAA",3,10.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79K Q84R E135A G146R",4
"lib1","SARS-CoV-2","AACGTATCCATTCAAA",2,64.04,9.79,-0.97,0.13,2.04,1.09,0.01,">1 nonsynonymous","N13V N40K",2
"lib1","SARS-CoV-2","AACGTATGAATCATAG",5,81.91,10.81,0.05,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTATGCATGCGCA",4,111.68,10.65,-0.11,0.05,2.96,1.02,0,"1 nonsynonymous","N58K",1
"lib1","SARS-CoV-2","AACGTATGCGACTGAA",12,202.05,10.28,-0.49,0.03,2.91,1.03,0,">1 nonsynonymous","S41C T55C",2
"lib1","SARS-CoV-2","AACGTATGCGGCACTA",4,8.29,6,-4.76,2,1.5,1.05,0.04,">1 nonsynonymous","T3V S53V Y91M D98M E135M",5
"lib1","SARS-CoV-2","AACGTATTACCCAGGA",1,28.93,9.93,-0.84,0.15,1.86,1.08,0.01,">1 nonsynonymous","T15L V20P Y35R",3
"lib1","SARS-CoV-2","AACGTCACAAGCTTAG",4,21.6,6,-4.76,0.96,1.5,1.12,0.01,">1 nonsynonymous","Y93D L122R K198F",3
"lib1","SARS-CoV-2","AACGTCACCGATTGCG",8,34.41,8.15,-2.62,0.34,1.5,1.17,0.05,">1 nonsynonymous","K56G A105V P161A",3
"lib1","SARS-CoV-2","AACGTCACGCGATACA",1,8.18,10.87,0.1,0.08,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTCACGTACTCTT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","E10* G155I",2
"lib1","SARS-CoV-2","AACGTCAGACGGAACA",2,31.23,10.69,-0.08,0.07,2.93,1.04,0,"1 nonsynonymous","K198W",1
"lib1","SARS-CoV-2","AACGTCAGCATGATTA",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N P169F P191H",3
"lib1","SARS-CoV-2","AACGTCATACAATCCA",6,85.92,10.8,0.04,0.08,2.85,1.08,0,">1 nonsynonymous","S36G D98N",2
"lib1","SARS-CoV-2","AACGTCATGAGGCTCT",5,59.48,10.66,-0.1,0.07,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTCATTAAACAAC",3,32.58,10.53,-0.24,0.04,2.93,1,0,">1 nonsynonymous","A22T N64V S147A Q163K",4
"lib1","SARS-CoV-2","AACGTCCAAAGATGAT",1,1.93,NA,NA,NA,NA,NA,NA,"stop","N1D Y39* C61V P82T T100L A105L P149M",7
"lib1","SARS-CoV-2","AACGTCCAAGAATACT",6,77.04,10.59,-0.17,0.08,2.76,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTCCAGACTCCGT",1,24.95,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F8A V37F V52L T55K C102W",5
"lib1","SARS-CoV-2","AACGTCCCGAAGGTCC",2,28.1,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","G9A G74I",2
"lib1","SARS-CoV-2","AACGTCCTACGTGAAT",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W Q84L E135T T170Y",4
"lib1","SARS-CoV-2","AACGTCGCTCTCCGTA",11,65.57,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","L131W",1
"lib1","SARS-CoV-2","AACGTCGTTCCATTTA",2,15.77,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","I142N G155C V181R",3
"lib1","SARS-CoV-2","AACGTCTACGTATGAA",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T T55D S200A",3
"lib1","SARS-CoV-2","AACGTCTAGCCGCAGT",6,98.13,10.69,-0.08,0.05,2.95,1.01,0,">1 nonsynonymous","P7S T201L",2
"lib1","SARS-CoV-2","AACGTCTCTCGCTTTA",2,53.63,10.69,-0.08,0.05,2.91,1.05,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AACGTCTTCACGATAA",3,2.01,NA,NA,NA,NA,NA,NA,"stop","L5R W23E K87*",3
"lib1","SARS-CoV-2","AACGTGAAAAACGAGT",1,10.87,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","W23G N130R V173S",3
"lib1","SARS-CoV-2","AACGTGAAACACTATG",1,12.58,9.21,-1.55,0.22,1.72,1.16,0.02,">1 nonsynonymous","L57P G83F S139N",3
"lib1","SARS-CoV-2","AACGTGAAACTAAAAT",2,47.99,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","N107L E135V V173Y",3
"lib1","SARS-CoV-2","AACGTGAACGCTGGAC",3,52.02,8.88,-1.88,0.11,2.5,1.11,0,">1 nonsynonymous","D98T G116S G152D Q168G",4
"lib1","SARS-CoV-2","AACGTGAGTTGACTTA",4,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E L38T S45R D75N G86T D90P V181S",7
"lib1","SARS-CoV-2","AACGTGATATGTAGAT",4,78.01,10.67,-0.09,0.1,2.67,1.02,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","AACGTGATCTTAGAAA",1,37.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9C Y39D G86C K199Y",4
"lib1","SARS-CoV-2","AACGTGATGAAGAAAT",2,9.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3I S41A Y50H T55N G86R S139L T148S",7
"lib1","SARS-CoV-2","AACGTGATGACCTCAT",1,10.28,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V52L R78F N107R G116H Y178P",5
"lib1","SARS-CoV-2","AACGTGATGGCCGAGT",7,81.32,10.75,-0.01,0.07,2.83,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACGTGATTGATAGGG",2,8.32,6,-4.76,2,3,1.1,0.02,">1 nonsynonymous","N24E F62I A81L G86M D97I K132V E154H",7
"lib1","SARS-CoV-2","AACGTGCAAATAAATA",3,87.09,9.74,-1.03,0.08,2.76,1.08,0,">1 nonsynonymous","N1Q N120T",2
"lib1","SARS-CoV-2","AACGTGCCAGATTCAG",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V T46Q P54H A81I D97V P149R",6
"lib1","SARS-CoV-2","AACGTGCCCAGCTCAC",6,18.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S43Q N64F I72H G86A A105L Y119L G155A L187R",8
"lib1","SARS-CoV-2","AACGTGCGTTCGCCCT",6,56.37,6,-4.76,1.14,1.5,1.32,0.02,">1 nonsynonymous","D97Y V103C Q168G",3
"lib1","SARS-CoV-2","AACGTGCGTTGGAGCA",1,11.54,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V11S V71Y R136Q S147Y",4
"lib1","SARS-CoV-2","AACGTGCTATGTAAAA",4,70.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14C A105V V115T R136V L162P V173M",6
"lib1","SARS-CoV-2","AACGTGCTCCTATCTG",4,18.56,6.88,-3.89,0.42,1.5,1.29,0.03,">1 nonsynonymous","L5S F167H L188V",3
"lib1","SARS-CoV-2","AACGTGGAAAACTCTT",7,120.18,9.02,-1.74,0.06,2.83,1.1,0,">1 nonsynonymous","F44S Y119T",2
"lib1","SARS-CoV-2","AACGTGGAGCCAGAAA",3,23.92,7.72,-3.05,0.37,1.5,1.39,0.05,">1 nonsynonymous","G152L V182T",2
"lib1","SARS-CoV-2","AACGTGGATACGTCCA",2,52.1,10.65,-0.12,0.05,2.87,1.06,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","AACGTGGGAATCATTC",1,2.86,NA,NA,NA,NA,NA,NA,"stop","I2A P7Q T63D F99R G116* Y165R V173K",7
"lib1","SARS-CoV-2","AACGTGGGATCCGCCG",2,10.72,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A33T Y91H C150Y E154W Y165W",5
"lib1","SARS-CoV-2","AACGTGTAATCGTCCA",1,0.4,NA,NA,NA,NA,NA,NA,"stop","V37D D90L D98N W106S Y123* V173S",6
"lib1","SARS-CoV-2","AACGTGTACTCATACC",2,14.58,9.57,-1.19,0.27,1.5,1,0.05,">1 nonsynonymous","G86T D97R T148Q",3
"lib1","SARS-CoV-2","AACGTGTTAACTACAA",5,128.25,10.59,-0.18,0.05,2.91,1.04,0,">1 nonsynonymous","G116P P149I",2
"lib1","SARS-CoV-2","AACGTGTTCAATAGGG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","T15* C61M A81R D90I E135S Q168W",6
"lib1","SARS-CoV-2","AACGTGTTTTATTACA",1,43.92,9.98,-0.78,0.16,1.66,1.02,0.01,">1 nonsynonymous","W23M S200L",2
"lib1","SARS-CoV-2","AACGTTAAAACACTGA",3,10.87,6.24,-4.52,1.18,3,1.06,0,">1 nonsynonymous","T15D F134I Q176T",3
"lib1","SARS-CoV-2","AACGTTAACTACAACA",3,1.63,NA,NA,NA,NA,NA,NA,"stop","A22M Y123*",2
"lib1","SARS-CoV-2","AACGTTAATAATCCCC",11,2.75,NA,NA,NA,NA,NA,NA,"stop","Y91* D97S",2
"lib1","SARS-CoV-2","AACGTTAATTAAGAAT",6,0.32,NA,NA,NA,NA,NA,NA,"stop","S45* D97L V103C S139L P149*",5
"lib1","SARS-CoV-2","AACGTTAATTCAAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37E D90* L122Q L162S Q176E",5
"lib1","SARS-CoV-2","AACGTTACATCAGAAC",13,2.14,NA,NA,NA,NA,NA,NA,"stop","I2Q I28W L57G K94* C150R P161A A190V",7
"lib1","SARS-CoV-2","AACGTTACCACGATTA",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K S43Y Y66K R73K K94S K128E K199L",7
"lib1","SARS-CoV-2","AACGTTACCATCAATA",1,30.1,10.6,-0.17,0.07,2.94,1,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","AACGTTACTTCCTTTT",1,22.7,8.72,-2.05,0.23,1.73,1.07,0.03,">1 nonsynonymous","I88V N157F",2
"lib1","SARS-CoV-2","AACGTTAGTCTTCCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15E Y21K V103* F134I",4
"lib1","SARS-CoV-2","AACGTTATACATCATT",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97A V103Q D112E",3
"lib1","SARS-CoV-2","AACGTTATATACATGT",4,50.1,8.44,-2.32,0.3,1.5,1,0.03,">1 nonsynonymous","R25S N58Q D75V",3
"lib1","SARS-CoV-2","AACGTTATTTTAACCA",6,0.07,NA,NA,NA,NA,NA,NA,"stop","T15C A33H D68* V103M S108T",5
"lib1","SARS-CoV-2","AACGTTCAAAACTTGA",1,10.76,10.75,-0.02,0.19,2.79,1.04,0.01,">1 nonsynonymous","T15D V37L",2
"lib1","SARS-CoV-2","AACGTTCAAACTAAGT",4,74.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37N N120C F167T H189T",4
"lib1","SARS-CoV-2","AACGTTCAACTTTCGA",3,143.3,9.34,-1.42,0.07,2.56,1.11,0,">1 nonsynonymous","S43Y P177S",2
"lib1","SARS-CoV-2","AACGTTCACCTGTAGC",2,10.59,6.64,-4.13,0.38,3,1,0,">1 nonsynonymous","C49V F62N A89Q L125S",4
"lib1","SARS-CoV-2","AACGTTCACTCCCATT",2,25.84,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F62V W106C N107H",3
"lib1","SARS-CoV-2","AACGTTCAGGATATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F17M N118*",2
"lib1","SARS-CoV-2","AACGTTCATGTTATCT",5,37.43,10.66,-0.1,0.06,2.96,1.03,0,">1 nonsynonymous","S43V V153S",2
"lib1","SARS-CoV-2","AACGTTCCATTGCTAA",2,43.21,10.15,-0.62,0.06,2.77,1.04,0,">1 nonsynonymous","P7L I142Y",2
"lib1","SARS-CoV-2","AACGTTCCGAGCCTGT",5,14.39,9.83,-0.93,0.34,1.83,1.02,0.06,">1 nonsynonymous","C61S S69K",2
"lib1","SARS-CoV-2","AACGTTCTATCCCCTA",2,29.17,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F8K K26G K56A I104R F126H",5
"lib1","SARS-CoV-2","AACGTTGAAGCAAACC",5,18.33,8.7,-2.06,0.22,1.5,1.05,0.02,">1 nonsynonymous","Y91N W106V",2
"lib1","SARS-CoV-2","AACGTTGAAGGTAGAA",2,12.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I N110I R124S",3
"lib1","SARS-CoV-2","AACGTTGAATTTTCGA",2,0.41,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACGTTGAGGTGCAGT",10,61.03,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S43E T55S I72F",3
"lib1","SARS-CoV-2","AACGTTGCAGATTGAC",5,34.47,6.8,-3.97,0.38,1.5,1.11,0.02,">1 nonsynonymous","N64G L183G S200P",3
"lib1","SARS-CoV-2","AACGTTGCATAAGACA",2,17.81,9.66,-1.11,0.21,2.16,1.16,0.02,"1 nonsynonymous","F8T",1
"lib1","SARS-CoV-2","AACGTTGGGCGCTAAG",4,32.44,10.69,-0.08,0.05,2.93,1.05,0,">1 nonsynonymous","D97F V153M",2
"lib1","SARS-CoV-2","AACGTTGTTAGTTAGC",11,162.98,8.78,-1.98,0.09,2.69,1.09,0,">1 nonsynonymous","E10H A145F",2
"lib1","SARS-CoV-2","AACGTTTATGTAAGAG",3,42.91,9.59,-1.18,0.13,1.89,1.01,0.01,">1 nonsynonymous","T63S A105N",2
"lib1","SARS-CoV-2","AACGTTTTATTATAAA",13,6.85,NA,NA,NA,NA,NA,NA,"stop","C31R D68A L122* K128V",4
"lib1","SARS-CoV-2","AACGTTTTCTATGGGC",6,1.57,NA,NA,NA,NA,NA,NA,"stop","A14Y I28Y Y143*",3
"lib1","SARS-CoV-2","AACTAAAAATAGACAG",4,0.68,NA,NA,NA,NA,NA,NA,"stop","V103M W106*",2
"lib1","SARS-CoV-2","AACTAAAAATGAGGGA",7,40.69,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A81D N118M S139F G174W",4
"lib1","SARS-CoV-2","AACTAAAACGCCTAAA",5,11.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L38A Y50I N92F",3
"lib1","SARS-CoV-2","AACTAAAACTCACGGC",7,63.01,9.89,-0.87,0.09,2.03,1.06,0,">1 nonsynonymous","V103C L122K G155E",3
"lib1","SARS-CoV-2","AACTAAAACTGCATTA",1,40.43,9.86,-0.9,0.05,2.49,1.01,0,">1 nonsynonymous","T100F R136I S184L",3
"lib1","SARS-CoV-2","AACTAAAAGCAACCTT",1,5.48,9.84,-0.92,0.2,2,1,0.02,">1 nonsynonymous","T15N Y21V L111R",3
"lib1","SARS-CoV-2","AACTAAAATAAAATCC",1,38.6,10.85,0.09,0.08,2.97,1,0,">1 nonsynonymous","S45D D59E",2
"lib1","SARS-CoV-2","AACTAAAATGACACAG",6,59,9.25,-1.52,0.1,2.6,1.1,0,">1 nonsynonymous","F44P L60I P149N G174E K199R",5
"lib1","SARS-CoV-2","AACTAAAATGGGAGTG",3,20.95,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K48Y Y91Q G116I F126M S147N Y178R",6
"lib1","SARS-CoV-2","AACTAAAATTGGAACA",5,42.83,6.12,-4.65,0.76,1.5,1.18,0.02,">1 nonsynonymous","C6T N64S T100P N120M I138C Y143K",6
"lib1","SARS-CoV-2","AACTAAACAAAGATCA",1,5.48,10.68,-0.08,0.03,3,1,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","AACTAAACATGAGCAG",5,126.46,10.74,-0.03,0.03,2.93,1.03,0,">1 nonsynonymous","A33W V65C",2
"lib1","SARS-CoV-2","AACTAAACCGAAACGG",2,1.85,NA,NA,NA,NA,NA,NA,"stop","P7L Q84* A105W",3
"lib1","SARS-CoV-2","AACTAAACCTCAAAAG",3,34.5,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G51T N110K Y123T S139Y",4
"lib1","SARS-CoV-2","AACTAAACGAAAATAT",5,54.53,10.41,-0.36,0.09,2.89,1.03,0,">1 nonsynonymous","K56M D98L",2
"lib1","SARS-CoV-2","AACTAAACGGGGCGCG",3,55.02,9.96,-0.81,0.1,2.29,1.02,0,">1 nonsynonymous","D75Y K132V S164Y",3
"lib1","SARS-CoV-2","AACTAAACTGAAGCCT",5,37.81,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","V32S C49V G83S D112M Y121S Q144T L188N",7
"lib1","SARS-CoV-2","AACTAAAGAAAGAGTC",2,5.5,9.38,-1.38,0.38,2.3,1.21,0.03,">1 nonsynonymous","A33D L57K",2
"lib1","SARS-CoV-2","AACTAAAGAACCAAAC",2,7.81,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","K94L R136S",2
"lib1","SARS-CoV-2","AACTAAAGAAGCGTGA",1,13.12,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45N T55I N120Y Q176K",4
"lib1","SARS-CoV-2","AACTAAAGATTGTCTG",3,16.53,6.81,-3.96,0.74,1.5,1.2,0.08,">1 nonsynonymous","D68R Y121L",2
"lib1","SARS-CoV-2","AACTAAAGGTCTTGCG",1,19.98,6.35,-4.41,0.6,1.5,1.17,0.02,">1 nonsynonymous","K48D D68Q K94S G101C I138K P149S",6
"lib1","SARS-CoV-2","AACTAAAGTAAACAAT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52T Y91M W106E G152C",4
"lib1","SARS-CoV-2","AACTAAAGTCATGTTG",5,26.17,10.82,0.05,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAAAGTCCACCTT",8,79.36,6.18,-4.58,0.38,1.5,1.15,0.01,">1 nonsynonymous","F70W T100Q",2
"lib1","SARS-CoV-2","AACTAAAGTGCCGGCA",2,16.6,7.21,-3.55,0.35,1.5,1.14,0.04,">1 nonsynonymous","T15K E76W Y91W Y119G L187P",5
"lib1","SARS-CoV-2","AACTAAAGTGCGCATA",4,28.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31T V37S K56M Y93T F99H D112T",6
"lib1","SARS-CoV-2","AACTAAAGTTTTTACT",4,47.71,10.56,-0.21,0.04,2.89,1.02,0,"1 nonsynonymous","F134C",1
"lib1","SARS-CoV-2","AACTAAATAAACTAAC",3,47.8,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I2P V11M R124M P169T Q176W",5
"lib1","SARS-CoV-2","AACTAAATAACAACTC",6,63.68,10.72,-0.04,0.08,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAAATAATCTGGC",2,9.82,9.72,-1.05,0.68,1.5,1,0.07,">1 nonsynonymous","N64C L131S G166S",3
"lib1","SARS-CoV-2","AACTAAATACAAACAT",7,78.15,10.7,-0.06,0.06,2.88,1.07,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","AACTAAATAGACCCAC",2,93.65,10.78,0.02,0.06,2.93,1.03,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","AACTAAATAGCGAACA",2,0.91,NA,NA,NA,NA,NA,NA,"stop","A81R D90S L131* G146Y",4
"lib1","SARS-CoV-2","AACTAAATGAAAGGCA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","R27* D90R S129N A145M",4
"lib1","SARS-CoV-2","AACTAAATGAGCAGTG",4,30.3,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22K N58F R73Y G83D T148P G196I",6
"lib1","SARS-CoV-2","AACTAAATGTAATGTC",2,27.39,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A105S F134Q G146I",3
"lib1","SARS-CoV-2","AACTAAATGTACAAAA",1,19.56,8.29,-2.47,0.21,1.7,1.18,0.01,">1 nonsynonymous","N24V Y119T V173S",3
"lib1","SARS-CoV-2","AACTAAATTAAAAACT",1,12.72,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","L38H Y66T P96M K198F",4
"lib1","SARS-CoV-2","AACTAAATTGCTACAC",2,16.57,10.42,-0.34,0.06,2.91,1.02,0,">1 nonsynonymous","R16P L60M",2
"lib1","SARS-CoV-2","AACTAAATTGGGGCAG",4,9.71,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41N F99N E141L K199M",4
"lib1","SARS-CoV-2","AACTAACAAAATTTAA",3,44.84,10.31,-0.45,0.06,2.95,1.02,0,">1 nonsynonymous","V153Q Q168N",2
"lib1","SARS-CoV-2","AACTAACAACCAATAT",8,36,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6S C49L I88D C150V N157I",5
"lib1","SARS-CoV-2","AACTAACAACTACAGA",2,5.25,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V32I V103G N110C",3
"lib1","SARS-CoV-2","AACTAACACAAAGTTC",7,48.71,9.9,-0.87,0.12,2.09,1.05,0.01,">1 nonsynonymous","N13R F44W G152L",3
"lib1","SARS-CoV-2","AACTAACACAATGCAG",2,5.91,6.44,-4.32,0.36,1.5,1.02,0,">1 nonsynonymous","N1S K94I T148C S184C S200L",5
"lib1","SARS-CoV-2","AACTAACACATAGCAA",5,32.49,9.28,-1.48,0.05,2.9,1.09,0,">1 nonsynonymous","L60Y A89P N171L",3
"lib1","SARS-CoV-2","AACTAACAGAGAATAA",1,4.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACTAACAGTCACACA",1,9.19,8.04,-2.72,0.53,1.5,1.14,0.06,">1 nonsynonymous","N118I S139L",2
"lib1","SARS-CoV-2","AACTAACATCAAACAA",1,101.28,10.85,0.08,0.06,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAACATGGATAGG",2,38.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10A S29F L95S",3
"lib1","SARS-CoV-2","AACTAACATGTACTAG",1,9.57,10.77,0.01,0.09,2.98,1,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","AACTAACATTGCTAGA",4,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T F17Y I88Y V173P",4
"lib1","SARS-CoV-2","AACTAACCAAACTCAA",8,87.86,9.65,-1.12,0.12,1.91,1.06,0.01,">1 nonsynonymous","Y35G T46S S164W",3
"lib1","SARS-CoV-2","AACTAACCCGGATGCT",3,60.83,9.01,-1.76,0.14,1.88,1.19,0.01,">1 nonsynonymous","G51N D90F P161S",3
"lib1","SARS-CoV-2","AACTAACCCTGATGAC",14,113.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L C102A",2
"lib1","SARS-CoV-2","AACTAACCGTATATAT",6,21.9,10.06,-0.7,0.14,2.49,1.06,0.01,">1 nonsynonymous","D34I S41W F62S V173M",4
"lib1","SARS-CoV-2","AACTAACCTAGGGTTA",2,39.05,8.92,-1.85,0.19,1.82,1.09,0.02,">1 nonsynonymous","D90V P169I",2
"lib1","SARS-CoV-2","AACTAACCTATCACCA",3,101.3,10.71,-0.06,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAACCTGCGAAAA",8,54.86,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89T P96S Y121W S200V",4
"lib1","SARS-CoV-2","AACTAACCTGCTTGTT",1,14.43,10.07,-0.69,0.28,1.8,1.04,0.02,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","AACTAACGGCTGGAAT",3,29.97,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A42G I72H F99H",3
"lib1","SARS-CoV-2","AACTAACGGTTTGGTG",4,17.3,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","D59K E135P S184R A192R",4
"lib1","SARS-CoV-2","AACTAACTATTTAGAA",8,2.39,NA,NA,NA,NA,NA,NA,"stop","C6V R25* N171C",3
"lib1","SARS-CoV-2","AACTAACTCGTAGAGG",1,13.66,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","G9W T55S G172L T201L",4
"lib1","SARS-CoV-2","AACTAACTTGTCAAAT",3,20.43,6.64,-4.13,0.5,2.08,1.1,0.03,">1 nonsynonymous","A14E Y50D F62L K87D",4
"lib1","SARS-CoV-2","AACTAACTTTTACGTA",10,116.61,10.82,0.05,0.07,2.91,1.05,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","AACTAAGAAATATTCA",12,155.58,8.73,-2.03,0.09,2.49,1.08,0,">1 nonsynonymous","G116A G146Y",2
"lib1","SARS-CoV-2","AACTAAGACCCAAACG",13,149.06,7.55,-3.22,0.31,1.5,1.11,0.03,">1 nonsynonymous","K94E K128L",2
"lib1","SARS-CoV-2","AACTAAGATTCAATTA",2,22.47,6.92,-3.84,0.3,1.5,1.03,0.02,">1 nonsynonymous","V32S A105G R124S F134D",4
"lib1","SARS-CoV-2","AACTAAGCCATGTGTT",2,7.45,10.01,-0.75,0.14,2.41,1.15,0.01,">1 nonsynonymous","E10A D34H P191R",3
"lib1","SARS-CoV-2","AACTAAGCCATGTTCA",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L V103R R136K",3
"lib1","SARS-CoV-2","AACTAAGGAAGGTAAC",4,40.94,6.63,-4.14,0.65,1.5,1.08,0.05,">1 nonsynonymous","N157C Y165M",2
"lib1","SARS-CoV-2","AACTAAGTAACGGCCT",3,5.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q N107A L183H",3
"lib1","SARS-CoV-2","AACTAAGTAATTAAAC",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V P96K Q168S V181K",4
"lib1","SARS-CoV-2","AACTAAGTTAACATTC",10,105.31,10.78,0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAATAAAAAATGT",6,35.87,10.77,0.01,0.07,2.92,1.01,0,"1 nonsynonymous","G51K",1
"lib1","SARS-CoV-2","AACTAATAACGATCAA",4,1.59,NA,NA,NA,NA,NA,NA,"stop","R78* K114V N120S P191T",4
"lib1","SARS-CoV-2","AACTAATAACTCGCGA",4,14.22,10.82,0.05,0.03,3,1,0,"1 nonsynonymous","G83M",1
"lib1","SARS-CoV-2","AACTAATAATAAGAAC",1,2.52,NA,NA,NA,NA,NA,NA,"stop","R27* L122T",2
"lib1","SARS-CoV-2","AACTAATAGACATCTG",3,30.26,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","AACTAATAGACCCTCA",13,222.15,10.72,-0.04,0.05,2.96,1.02,0,">1 nonsynonymous","V37G D97N L188V",3
"lib1","SARS-CoV-2","AACTAATATCGACACA",2,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F S29N N58Y D90N",4
"lib1","SARS-CoV-2","AACTAATCAGTTATCG",1,56.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D97S P149H G172W Y178H",4
"lib1","SARS-CoV-2","AACTAATCTCCTAAAT",3,14.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I80M V182A",2
"lib1","SARS-CoV-2","AACTAATCTGCTAGCG",1,8.61,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3F Y91N K132D E141T E154M H189Y",6
"lib1","SARS-CoV-2","AACTAATGCGCAATCC",3,26.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N30V F44Y D90I N151C T201Q",5
"lib1","SARS-CoV-2","AACTAATTAAATTAGG",1,17.34,10.12,-0.64,0.15,2.33,1.11,0.01,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","AACTAATTAGGTGAGC",7,21.42,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A14G F47S T85M N120F S139P",5
"lib1","SARS-CoV-2","AACTAATTTAAAGAAA",3,79.26,10.41,-0.35,0.07,2.82,1.02,0,"1 nonsynonymous","R136I",1
"lib1","SARS-CoV-2","AACTACAAAACGAATA",5,28.03,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","R27S F44Y K87M I104M S113L P149A",6
"lib1","SARS-CoV-2","AACTACAAAGCTAACG",4,6.51,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y50N V77F Y119I P149R N171H",5
"lib1","SARS-CoV-2","AACTACAAGCAAACCT",2,6.23,10.41,-0.35,0.14,2.92,1,0.01,">1 nonsynonymous","N151M S184K",2
"lib1","SARS-CoV-2","AACTACAAGGAACTAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACTACAAGTAACCTC",1,0,NA,NA,NA,NA,NA,NA,"stop","G155*",1
"lib1","SARS-CoV-2","AACTACAATAGATAAA",2,63.13,10.75,-0.01,0.08,2.94,1.01,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","AACTACAATGGATCGC",2,14.99,9.88,-0.88,0.15,2.77,1.04,0.01,">1 nonsynonymous","N13K E154D",2
"lib1","SARS-CoV-2","AACTACAATTCGTACT",4,198.21,10.72,-0.05,0.07,2.87,1.08,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","AACTACACAAACTTCA",2,53.16,10.22,-0.54,0.07,2.82,1,0,">1 nonsynonymous","L38T P197L",2
"lib1","SARS-CoV-2","AACTACACAACTTGAA",4,18.08,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T100Q Y143V V180A",3
"lib1","SARS-CoV-2","AACTACACACACATTA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","D112I Q168* L183P",3
"lib1","SARS-CoV-2","AACTACACACTTGCAT",7,109.36,9.95,-0.81,0.09,2.47,1.02,0,">1 nonsynonymous","G9L W106F",2
"lib1","SARS-CoV-2","AACTACATAGATAAGA",3,13.86,9.14,-1.63,0.25,1.92,1.24,0.02,">1 nonsynonymous","P54H T55I R73P N110K",4
"lib1","SARS-CoV-2","AACTACATCTTACATA",8,100.42,6.29,-4.47,0.59,1.5,1.15,0.02,">1 nonsynonymous","L5S T15P Y35F Y121D G146E Y178S S200F",7
"lib1","SARS-CoV-2","AACTACATTACTCGTT",2,32.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8K Q84S N118Y Y123R",4
"lib1","SARS-CoV-2","AACTACATTGGAAAAG",3,9.2,6,-4.76,2,1.5,1.07,0.04,">1 nonsynonymous","T55L G83S N107K R127H",4
"lib1","SARS-CoV-2","AACTACCAATAAAGTA",4,108.39,10.72,-0.05,0.08,2.86,1.1,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","AACTACCACACAGGCA",9,58.82,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C49F N109P",2
"lib1","SARS-CoV-2","AACTACCAGCGTTAAG",1,48.19,8.22,-2.54,0.24,1.7,1.15,0.02,">1 nonsynonymous","C31T G74K",2
"lib1","SARS-CoV-2","AACTACCATAATAGAT",2,4.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D75E",1
"lib1","SARS-CoV-2","AACTACCCCGAAAGTG",1,11.24,10.9,0.14,0.1,2.9,1.03,0,">1 nonsynonymous","L38F F44Y",2
"lib1","SARS-CoV-2","AACTACCCGTTGCCTC",4,19.06,9.38,-1.39,0.23,1.62,1.18,0.03,"1 nonsynonymous","L131Q",1
"lib1","SARS-CoV-2","AACTACCGACTTATAC",2,46.68,9.8,-0.96,0.15,1.91,1.09,0.01,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","AACTACCGAGTACACG",1,22.84,10.76,0,0.08,2.8,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTACCGCAACTACT",5,108.73,10.62,-0.15,0.09,2.69,1.07,0,">1 nonsynonymous","V37I K56Q",2
"lib1","SARS-CoV-2","AACTACCGGACCTACA",3,15.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5Y G74T E135P S184T",4
"lib1","SARS-CoV-2","AACTACCGGGAAACCA",6,56.71,6,-4.76,2,1.5,1.4,0.05,">1 nonsynonymous","G101N P149A",2
"lib1","SARS-CoV-2","AACTACCGTCAACGCC",3,45.58,9.87,-0.9,0.11,2.2,1,0.01,">1 nonsynonymous","A105V N120L",2
"lib1","SARS-CoV-2","AACTACCTCAAAGCTT",4,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M I72Q T148L L183T",4
"lib1","SARS-CoV-2","AACTACGAAAGATGCA",7,128.1,8.38,-2.38,0.12,2.49,1.06,0.01,">1 nonsynonymous","N120L T148S T170C T201L",4
"lib1","SARS-CoV-2","AACTACGAAATAGATA",7,57.53,9.96,-0.8,0.16,2.06,1.12,0.01,">1 nonsynonymous","P133H P149I",2
"lib1","SARS-CoV-2","AACTACGAACAGATCC",14,0.28,NA,NA,NA,NA,NA,NA,"stop","R16K R27* Q84D L183M K199Y",5
"lib1","SARS-CoV-2","AACTACGATACAACCG",1,7.34,10,-0.76,0.14,2.7,1.1,0.01,">1 nonsynonymous","V37G R78F E141A P191T",4
"lib1","SARS-CoV-2","AACTACGCAAAGCTAA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q C61Y T100M",3
"lib1","SARS-CoV-2","AACTACGCGGACGGTT",2,5.7,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","L5C K94I",2
"lib1","SARS-CoV-2","AACTACGGCACTACAG",1,1.44,NA,NA,NA,NA,NA,NA,"stop","N40C F47G C150I E154S C158*",5
"lib1","SARS-CoV-2","AACTACGGGCCAAACA",3,135.55,10.63,-0.13,0.05,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTACGGGCTGAATA",9,4.19,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","AACTACGGTAAAACAA",5,43.55,10.76,-0.01,0.12,2.84,1.09,0.01,">1 nonsynonymous","L5I T85S",2
"lib1","SARS-CoV-2","AACTACGGTCAGGGTA",1,17.3,10.77,0.01,0.04,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AACTACGTACAGTAAC",7,59.39,6,-4.76,1.13,1.5,1.31,0.02,">1 nonsynonymous","R16C N64Q V71L Y119V P149V",5
"lib1","SARS-CoV-2","AACTACGTCTCATGGG",5,6.68,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T15F P133T S139H T148W S184H",5
"lib1","SARS-CoV-2","AACTACTAAAGACGTA",7,57.94,7.57,-3.2,0.44,1.5,1.13,0.06,"1 nonsynonymous","P82D",1
"lib1","SARS-CoV-2","AACTACTATCGAGGTA",1,46.31,8.87,-1.9,0.11,2.2,1.16,0.01,">1 nonsynonymous","D59A D97M Y165H",3
"lib1","SARS-CoV-2","AACTACTGAAAATTGG",8,59.9,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D59M E76I P96C T201S",4
"lib1","SARS-CoV-2","AACTACTGCCCCCACA",2,16.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86L V103T",2
"lib1","SARS-CoV-2","AACTACTGTTGTACAG",1,6.02,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R78H A89L N157F",3
"lib1","SARS-CoV-2","AACTACTTAGCAATAG",7,136.57,10.71,-0.06,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTACTTCCTTCCTT",4,25.84,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N92K Y175K",2
"lib1","SARS-CoV-2","AACTACTTGCTACCAT",1,12.2,9.91,-0.85,0.17,2.42,1.12,0.01,">1 nonsynonymous","L60S A89T K128T",3
"lib1","SARS-CoV-2","AACTACTTTAACAAAA",6,36.59,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S69Q D112R",2
"lib1","SARS-CoV-2","AACTACTTTACGTTAG",2,33.17,10.62,-0.15,0.09,2.83,1.07,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","AACTAGAAAAGTTAAG",2,9.07,6,-4.76,2,3,1.14,0.03,">1 nonsynonymous","A42Y C49V D112S",3
"lib1","SARS-CoV-2","AACTAGAAATCGAGTT",2,15.96,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A14F Y35C P82M V173G",4
"lib1","SARS-CoV-2","AACTAGAACAACAACT",7,60.49,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T3M F8L V32A V37T T63I F99Q",6
"lib1","SARS-CoV-2","AACTAGAACAACTGAA",1,21.43,10.57,-0.19,0.06,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGAACAATAATA",2,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N T15V P96E T140P",4
"lib1","SARS-CoV-2","AACTAGAACCACCAAA",14,241.46,8.7,-2.07,0.11,2.55,1.08,0,">1 nonsynonymous","S45L Y119F T201V",3
"lib1","SARS-CoV-2","AACTAGAACGAAACGG",2,30.44,7.22,-3.54,0.26,1.5,1.09,0.02,">1 nonsynonymous","S19R R124S N151S",3
"lib1","SARS-CoV-2","AACTAGAATATTTGTA",5,44.35,10.7,-0.07,0.11,2.91,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGACGTAATACG",1,41.31,10.55,-0.22,0.04,2.92,1.03,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","AACTAGACTGACGTCA",3,20.1,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P149R Q168P",2
"lib1","SARS-CoV-2","AACTAGACTGCTTTCT",3,38.36,10.75,-0.01,0.04,2.9,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AACTAGAGAAACACTA",6,32.04,6.34,-4.42,0.72,1.5,1.22,0.03,">1 nonsynonymous","V11F T85D G101P L122F",4
"lib1","SARS-CoV-2","AACTAGAGACTCATCG",1,33.14,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G83D F99G W106C G166C",4
"lib1","SARS-CoV-2","AACTAGATAACAAATG",3,72.22,10.66,-0.1,0.09,2.87,1.01,0,">1 nonsynonymous","V32K V173F",2
"lib1","SARS-CoV-2","AACTAGATACGATTCG",3,51.36,10.51,-0.26,0.06,2.9,1.03,0,">1 nonsynonymous","A42S L122R T140M",3
"lib1","SARS-CoV-2","AACTAGATAGAACTAG",9,0.3,NA,NA,NA,NA,NA,NA,"stop","T3H F156*",2
"lib1","SARS-CoV-2","AACTAGATGAATGACA",3,33.75,9.08,-1.69,0.1,2.87,1.11,0,">1 nonsynonymous","G9Y G166K",2
"lib1","SARS-CoV-2","AACTAGATTATAGAGG",3,59.68,8.99,-1.77,0.19,2.05,1.11,0.02,">1 nonsynonymous","N1Y T55A G74Y",3
"lib1","SARS-CoV-2","AACTAGCAATAAGCAG",12,48.42,6,-4.76,2,1.5,1.27,0.01,">1 nonsynonymous","L38W L57G K128R D137Q",4
"lib1","SARS-CoV-2","AACTAGCAATACGAGA",3,52.55,10.77,0.01,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGCAGAGAATAG",3,24.27,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3P S45R K56R T100E R124V G146C F160D",7
"lib1","SARS-CoV-2","AACTAGCAGCATCCAG",1,13.99,10.14,-0.62,0.43,2.29,1,0.08,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","AACTAGCAGTTTGCCG",1,47.36,10.74,-0.02,0.06,3,1,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","AACTAGCATACCGAAA",3,39.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R G146V P169W",3
"lib1","SARS-CoV-2","AACTAGCATCATCCAG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N W106E",2
"lib1","SARS-CoV-2","AACTAGCATCATGAAA",6,105.54,10.66,-0.1,0.05,2.9,1.02,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","AACTAGCATCCTACAC",5,23.04,6.13,-4.63,1.01,1.5,1.24,0.03,">1 nonsynonymous","N64D I88S L131G",3
"lib1","SARS-CoV-2","AACTAGCTGGCAACAT",2,9.23,10.13,-0.64,0.21,2.41,1,0.01,">1 nonsynonymous","F62D D90M",2
"lib1","SARS-CoV-2","AACTAGGAAACAAAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","S41* N107M",2
"lib1","SARS-CoV-2","AACTAGGATAATGTCA",3,61.82,7.13,-3.63,0.37,1.5,1.21,0.02,">1 nonsynonymous","I2G F8S V115D T148L T170M",5
"lib1","SARS-CoV-2","AACTAGGCAAACCGAG",3,24.33,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","L95G",1
"lib1","SARS-CoV-2","AACTAGGCCATTTGTA",2,69.34,10.51,-0.25,0.04,2.89,1.03,0,">1 nonsynonymous","A33L Q168S",2
"lib1","SARS-CoV-2","AACTAGGCCGGATTCG",2,39.57,10.87,0.1,0.11,2.83,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGGGAACTCTTG",2,16.64,10.75,-0.02,0.05,2.99,1,0,"1 nonsynonymous","K132I",1
"lib1","SARS-CoV-2","AACTAGGGATCTTTAT",3,75.26,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Q144R F167R Q176V",3
"lib1","SARS-CoV-2","AACTAGGGGAACTGAC",4,92.22,10.49,-0.28,0.05,2.91,1.02,0,">1 nonsynonymous","K87Y F160L",2
"lib1","SARS-CoV-2","AACTAGGTGATTTACA",2,30.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L D98W G174V",3
"lib1","SARS-CoV-2","AACTAGTAATTAAGTA",5,54.22,10.74,-0.03,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGTAGCACATAA",8,148.58,10.72,-0.05,0.04,2.89,1.06,0,">1 nonsynonymous","R16I A42H",2
"lib1","SARS-CoV-2","AACTAGTATACTCACT",4,21.71,8.43,-2.34,0.15,2.8,1.02,0.01,"1 nonsynonymous","N157W",1
"lib1","SARS-CoV-2","AACTAGTATATAAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A22R S69* V103K G172V",4
"lib1","SARS-CoV-2","AACTAGTCCGCCTTAT",2,47.96,10.79,0.03,0.09,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTAGTGACGCGCCA",9,103.15,10.24,-0.52,0.04,2.85,1.01,0,">1 nonsynonymous","G9L K56A K132C",3
"lib1","SARS-CoV-2","AACTAGTTATATGAAA",9,33.57,6,-4.76,2,1.68,1.14,0.04,">1 nonsynonymous","T85L G101N R136N",3
"lib1","SARS-CoV-2","AACTAGTTGTTTTGGA",5,1.48,NA,NA,NA,NA,NA,NA,"stop","G86S D112* C158N",3
"lib1","SARS-CoV-2","AACTATAAACTGCTTT",2,19.53,9.83,-0.94,0.15,2.54,1.16,0.01,">1 nonsynonymous","V37P Y178L",2
"lib1","SARS-CoV-2","AACTATAAAGTGGGCA",1,18.8,9.83,-0.93,0.14,1.77,1.12,0.01,">1 nonsynonymous","Y35V F185H",2
"lib1","SARS-CoV-2","AACTATAACAGCGTAA",3,17.54,8.64,-2.13,0.41,1.64,1.14,0.07,">1 nonsynonymous","F47V L57P T85L",3
"lib1","SARS-CoV-2","AACTATAATTTATAAA",1,16.02,6.86,-3.9,0.67,1.75,1.09,0.06,">1 nonsynonymous","A18K Y93H C158I S200I",4
"lib1","SARS-CoV-2","AACTATACACTGCGAA",1,60.99,8.53,-2.24,0.2,1.86,1.11,0.01,">1 nonsynonymous","N107I A192S",2
"lib1","SARS-CoV-2","AACTATACCCGCCATA",5,16.88,8.6,-2.16,0.3,2.32,1.17,0.05,">1 nonsynonymous","L5P R27K N107D K114G",4
"lib1","SARS-CoV-2","AACTATACTTCATGTC",1,24.71,7.84,-2.92,0.28,1.58,1.18,0.02,">1 nonsynonymous","K87Y N151S L162W",3
"lib1","SARS-CoV-2","AACTATACTTTAATGC",3,17.48,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91V F156K Q176H",3
"lib1","SARS-CoV-2","AACTATAGCTGACAAT",1,18.28,8.18,-2.59,0.32,1.5,1.09,0.03,"1 nonsynonymous","R25M",1
"lib1","SARS-CoV-2","AACTATAGGACCACCT",2,65.2,9.85,-0.92,0.1,2.26,1.04,0,">1 nonsynonymous","I2S T15E S36M C61F I104Y",5
"lib1","SARS-CoV-2","AACTATATAACAGCAG",3,38.29,10.64,-0.13,0.05,2.92,1.06,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AACTATATAGTCTAAA",1,63.51,9.45,-1.31,0.09,2.86,1.05,0,">1 nonsynonymous","T3S N40K N64V G117A",4
"lib1","SARS-CoV-2","AACTATATGAACTAAT",4,29.42,6.5,-4.27,0.46,1.5,1.1,0.02,">1 nonsynonymous","G74K Y91H D98S V173S",4
"lib1","SARS-CoV-2","AACTATCAACGAATAA",1,5.19,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N40L P54M V115H R179L",4
"lib1","SARS-CoV-2","AACTATCAGTACCTAT",6,29.79,7.9,-2.86,0.32,1.5,1.1,0.05,">1 nonsynonymous","T15L V37D F44L N110L G146F",5
"lib1","SARS-CoV-2","AACTATCATAACGGCC",2,101.8,10.23,-0.54,0.03,2.94,1.01,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","AACTATCATAACTAAG",1,21.56,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F99L Y121L P161M",3
"lib1","SARS-CoV-2","AACTATCATTAGTGAC",2,8.4,9.9,-0.86,0.19,2.69,1.01,0.01,">1 nonsynonymous","I2S C61V N92R",3
"lib1","SARS-CoV-2","AACTATCCAGAGATTG",6,92.57,10.5,-0.27,0.04,2.88,1.04,0,">1 nonsynonymous","S129G T148C",2
"lib1","SARS-CoV-2","AACTATCCATGATTAA",5,44.55,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y121W C158L",2
"lib1","SARS-CoV-2","AACTATCCGCTTATTG",1,11.89,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I72Q I88C C102P W106H Y121M G146K",6
"lib1","SARS-CoV-2","AACTATCCGTTATTAG",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P D98M S129H R136Y",4
"lib1","SARS-CoV-2","AACTATCCTAGCCCAT",3,17.29,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","E10S A67C P96Y",3
"lib1","SARS-CoV-2","AACTATCCTCACATTA",4,74.64,8.82,-1.95,0.08,2.09,1.07,0,">1 nonsynonymous","T15F A33D F156T",3
"lib1","SARS-CoV-2","AACTATCGAACCATAT",3,22.16,10.01,-0.76,0.11,1.97,1.07,0.01,">1 nonsynonymous","Y91R K114L",2
"lib1","SARS-CoV-2","AACTATCGTACAAAGT",1,8.3,7.9,-2.86,0.21,2.55,1.09,0.02,">1 nonsynonymous","R16V C61A N120S Y143S",4
"lib1","SARS-CoV-2","AACTATCTACAAAAAT",11,55.59,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F99P P149A S164V T201L",4
"lib1","SARS-CoV-2","AACTATCTATACCTTC",7,48.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6M F70L D112V F156Y Q168C",5
"lib1","SARS-CoV-2","AACTATGAAATTAAAT",2,33.35,10.27,-0.49,0.05,2.91,1,0,">1 nonsynonymous","R16W K132A V173G",3
"lib1","SARS-CoV-2","AACTATGAACGAGTTA",3,82.58,10.82,0.06,0.05,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AACTATGACAAGACCA",1,27.52,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","Y39I T55A F99H P133Q S184I",5
"lib1","SARS-CoV-2","AACTATGAGGTGTGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N G172T",2
"lib1","SARS-CoV-2","AACTATGATGCAATGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","AACTATGCGCCAACAA",2,13.85,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P82V S108D K128Y",3
"lib1","SARS-CoV-2","AACTATGCTAACCAAG",7,81.68,9.68,-1.08,0.11,2.15,1.06,0,">1 nonsynonymous","K56I Y123E T201Y",3
"lib1","SARS-CoV-2","AACTATGCTCTACCTA",1,115.33,9.4,-1.36,0.06,2.89,1.07,0,">1 nonsynonymous","N118E F156L",2
"lib1","SARS-CoV-2","AACTATGGCAGTATAA",17,444.26,9.44,-1.32,0.05,2.83,1.08,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","AACTATGTACCGGACC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","A14S C49L S129* G196L",4
"lib1","SARS-CoV-2","AACTATGTCAAATAGA",4,5.05,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","C49Y S108Y",2
"lib1","SARS-CoV-2","AACTATGTGGCCTGAA",1,6.9,10.8,0.03,0.1,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTATTAAAATAAAA",3,109.91,7.51,-3.26,0.1,1.61,1.15,0,"1 nonsynonymous","C150N",1
"lib1","SARS-CoV-2","AACTATTAAAATAACT",6,219.09,10.52,-0.24,0.06,2.74,1.06,0,">1 nonsynonymous","G9M S41Y V103A",3
"lib1","SARS-CoV-2","AACTATTACATCAAAA",6,72.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C31E D112F T201G",3
"lib1","SARS-CoV-2","AACTATTACCCATATC",2,0,NA,NA,NA,NA,NA,NA,"stop","E141* R179C",2
"lib1","SARS-CoV-2","AACTATTACGTACTTT",10,244.54,8.87,-1.89,0.06,2.63,1.1,0,">1 nonsynonymous","S147P Q176T",2
"lib1","SARS-CoV-2","AACTATTAGGCGCCGG",1,19.14,7.28,-3.48,0.37,1.5,1.14,0.04,">1 nonsynonymous","A14Y Y50H",2
"lib1","SARS-CoV-2","AACTATTATATGTGAT",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L C158G",2
"lib1","SARS-CoV-2","AACTATTATGCACTGA",2,84.79,10.09,-0.68,0.07,2.8,1.09,0,">1 nonsynonymous","A145Q K199G",2
"lib1","SARS-CoV-2","AACTATTATTTGACGA",11,105.53,6.39,-4.38,0.61,1.5,1.12,0.03,">1 nonsynonymous","S36M T63L D68V G86Y G116W S164N F167M",7
"lib1","SARS-CoV-2","AACTATTCACGAGTAA",6,91.85,10.69,-0.07,0.05,2.96,1.02,0,">1 nonsynonymous","V32S H189K",2
"lib1","SARS-CoV-2","AACTATTCAGGAGTAA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","D59R N130*",2
"lib1","SARS-CoV-2","AACTATTCATTCGACA",11,92.14,8.46,-2.3,0.11,1.66,1.12,0,">1 nonsynonymous","C6K D59S Q144V",3
"lib1","SARS-CoV-2","AACTATTCCACCCAAA",5,52.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C158P V173N T201Y",3
"lib1","SARS-CoV-2","AACTATTCTAAAAGTT",4,29.69,6,-4.76,1.59,3,1.16,0.01,">1 nonsynonymous","Y91P D98Y",2
"lib1","SARS-CoV-2","AACTATTGCCACGTCA",3,71.66,8.82,-1.95,0.08,2.83,1.1,0,">1 nonsynonymous","F62I K87P N171L",3
"lib1","SARS-CoV-2","AACTATTGCGAGCCCA",4,36.03,10.83,0.06,0.08,2.94,1,0,"1 nonsynonymous","N40R",1
"lib1","SARS-CoV-2","AACTATTGCGCTGAAG",4,20.26,6.63,-4.14,0.31,1.5,1.04,0.02,">1 nonsynonymous","V11N G86E L95S W106L",4
"lib1","SARS-CoV-2","AACTATTTTTTGGTTT",1,39.34,10.26,-0.5,0.09,2.85,1.02,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","AACTCAAAACGTTAAA",4,26.48,7.18,-3.59,0.61,1.5,1,0.08,">1 nonsynonymous","S19Q Y119C K132T F167H",4
"lib1","SARS-CoV-2","AACTCAAAATACTAAC",3,16.38,6.15,-4.61,0.4,3,1.12,0,">1 nonsynonymous","A22I F70I F134L T148W Q168P",5
"lib1","SARS-CoV-2","AACTCAAACAGAATCT",2,24.23,9.94,-0.82,0.14,1.81,1.1,0.01,">1 nonsynonymous","Y91S Q144S",2
"lib1","SARS-CoV-2","AACTCAAAGTCCGATT",10,7.93,NA,NA,NA,NA,NA,NA,"stop","E10* T140V L188N",3
"lib1","SARS-CoV-2","AACTCAACATATCGAT",3,25.57,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","G51H T100R A105Q",3
"lib1","SARS-CoV-2","AACTCAACCTAAATAG",4,60.62,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","P7Y N120T V180F",3
"lib1","SARS-CoV-2","AACTCAACGTTATGTA",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Q D97V",2
"lib1","SARS-CoV-2","AACTCAACTCACACAG",5,54.29,8.34,-2.42,0.22,1.98,1.06,0.02,">1 nonsynonymous","R27I D98Y S129W T170L",4
"lib1","SARS-CoV-2","AACTCAACTCACCAAG",8,63.49,6.81,-3.96,0.3,1.5,1.12,0.01,">1 nonsynonymous","P54Q G86R G116F",3
"lib1","SARS-CoV-2","AACTCAAGATGTTAGT",3,81.03,10.66,-0.1,0.06,2.86,1.12,0,">1 nonsynonymous","K56D T201G",2
"lib1","SARS-CoV-2","AACTCAAGCACGGTTG",7,147.22,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S113F N157S",2
"lib1","SARS-CoV-2","AACTCAAGCCATAGAA",4,45.45,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T55Q S113E D137Q",3
"lib1","SARS-CoV-2","AACTCAAGCCGGCCCA",5,52.84,10.79,0.03,0.05,2.91,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTCAATAAATAATT",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q G83R L162M",3
"lib1","SARS-CoV-2","AACTCAATCCCCTTTA",10,3.27,NA,NA,NA,NA,NA,NA,"stop","F17* G116R",2
"lib1","SARS-CoV-2","AACTCAATGACCTGTC",3,79.1,10.66,-0.1,0.06,2.95,1,0,"1 nonsynonymous","N151D",1
"lib1","SARS-CoV-2","AACTCACAAATTAATG",1,19.1,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G83D C102D A190S T201D",4
"lib1","SARS-CoV-2","AACTCACAATAATTGT",4,1.29,NA,NA,NA,NA,NA,NA,"stop","K56L Y175*",2
"lib1","SARS-CoV-2","AACTCACACAGAAAAC",2,0.46,NA,NA,NA,NA,NA,NA,"stop","F12R I28Q G51* A89L E141L",5
"lib1","SARS-CoV-2","AACTCACACGATATAG",13,197.75,9.43,-1.33,0.04,2.85,1.09,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","AACTCACATACAACCG",4,3.12,NA,NA,NA,NA,NA,NA,"stop","F8* T46N I88G",3
"lib1","SARS-CoV-2","AACTCACCAGATAAGA",1,9.79,11.11,0.35,0.13,2.91,1,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","AACTCACCGAGATTTA",4,16.18,6,-4.76,1.16,3,1.15,0.01,">1 nonsynonymous","A14I F70G D90N W106R G174R A190T",6
"lib1","SARS-CoV-2","AACTCACGGATATATA",6,75.63,8.62,-2.15,0.4,1.5,1,0.07,">1 nonsynonymous","L5V K87G D112I Y143T",4
"lib1","SARS-CoV-2","AACTCACGGGTCAGCC",4,31.73,10.3,-0.47,0.07,2.95,1,0,">1 nonsynonymous","A14I S147G",2
"lib1","SARS-CoV-2","AACTCACTATATGAAT",1,21.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12L Q84P R136V",3
"lib1","SARS-CoV-2","AACTCACTCATAATAG",10,148.5,10.63,-0.13,0.05,2.9,1.07,0,"1 nonsynonymous","P54D",1
"lib1","SARS-CoV-2","AACTCACTCCCCGCCT",1,19.28,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I80M Q144L N151S F185S",4
"lib1","SARS-CoV-2","AACTCACTGCTAACGT",7,64.09,8.83,-1.94,0.18,1.51,1.17,0.01,">1 nonsynonymous","W106L E154G S184N",3
"lib1","SARS-CoV-2","AACTCAGAAAACAATA",1,6.01,10.65,-0.12,0.13,2.83,1,0.01,">1 nonsynonymous","V37S G116V T201D",3
"lib1","SARS-CoV-2","AACTCAGAATTGACAA",1,22.03,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","N107I G152I",2
"lib1","SARS-CoV-2","AACTCAGAATTTCTAT",7,210.01,10.69,-0.08,0.05,2.88,1.07,0,"1 nonsynonymous","A18G",1
"lib1","SARS-CoV-2","AACTCAGACCGTTTTA",1,11.25,6.54,-4.23,0.31,1.5,1.08,0.01,">1 nonsynonymous","V37F G86A C102D I142L V180L",5
"lib1","SARS-CoV-2","AACTCAGACGTACAGA",2,13.56,6.32,-4.45,0.28,1.5,1.04,0,">1 nonsynonymous","S43D A145I F156W Y165R",4
"lib1","SARS-CoV-2","AACTCAGATAAAACAA",1,38.31,10.28,-0.48,0.05,2.87,1,0,">1 nonsynonymous","F62L E135T",2
"lib1","SARS-CoV-2","AACTCAGCGGTCGCAA",4,13.55,8.76,-2,0.29,1.5,1.07,0.04,">1 nonsynonymous","N4I Y121S G155R Q163A",4
"lib1","SARS-CoV-2","AACTCAGCTAAATCCT",3,42.85,7.55,-3.21,0.3,1.5,1.05,0.03,"1 nonsynonymous","D137K",1
"lib1","SARS-CoV-2","AACTCAGGATCGCGGA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I28* L60M V173Y",3
"lib1","SARS-CoV-2","AACTCAGGTAATAGAG",2,61.45,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","P96N S113W L188D",3
"lib1","SARS-CoV-2","AACTCAGTATTCTAAA",7,65.48,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P82R Q168P",2
"lib1","SARS-CoV-2","AACTCATAAAAAGATT",1,16.2,7.59,-3.18,0.29,1.5,1.01,0.05,">1 nonsynonymous","V77L N107E P161W T201L",4
"lib1","SARS-CoV-2","AACTCATAACACTAAA",3,106.46,10.25,-0.52,0.06,2.84,1.03,0,">1 nonsynonymous","T3A L57F",2
"lib1","SARS-CoV-2","AACTCATAAGCTAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10D G51S N118Y Q144*",4
"lib1","SARS-CoV-2","AACTCATAATACAACC",2,0.73,NA,NA,NA,NA,NA,NA,"stop","V20T S41* D112N",3
"lib1","SARS-CoV-2","AACTCATAATGAATAG",6,41.62,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88H K198E",2
"lib1","SARS-CoV-2","AACTCATATCAAAAAA",2,4.35,NA,NA,NA,NA,NA,NA,"stop","F62H Y91N R127N F134* G152C P169H",6
"lib1","SARS-CoV-2","AACTCATCAAACTTTT",12,168.83,10.68,-0.08,0.04,2.91,1.03,0,"1 nonsynonymous","K132I",1
"lib1","SARS-CoV-2","AACTCATCGACTATCG",2,44.95,10.19,-0.57,0.1,2.39,1,0,"1 nonsynonymous","A14P",1
"lib1","SARS-CoV-2","AACTCATCTAAACTGG",2,61.34,9.77,-1,0.07,2.8,1.02,0,"1 nonsynonymous","G117S",1
"lib1","SARS-CoV-2","AACTCATCTAAAGCAC",2,16.76,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N58H Y93V",2
"lib1","SARS-CoV-2","AACTCATCTGGGTTAA",4,118.88,10.77,0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTCATGCATCAATA",3,27.66,8.7,-2.07,0.18,1.86,1.11,0.02,">1 nonsynonymous","R78D D137F",2
"lib1","SARS-CoV-2","AACTCATTCCACCAAG",1,50.55,7.82,-2.95,0.21,1.54,1.11,0.02,">1 nonsynonymous","R16L S113D",2
"lib1","SARS-CoV-2","AACTCATTGTTCTCTT",2,78.92,9.09,-1.68,0.16,2.1,1.17,0.01,">1 nonsynonymous","T3A L60T Q144L V153S",4
"lib1","SARS-CoV-2","AACTCATTTAACAGAA",5,26.25,6,-4.76,1.69,1.5,1.18,0.05,">1 nonsynonymous","G101W R124Y N157S",3
"lib1","SARS-CoV-2","AACTCCAACAACGTTC",4,49.09,6,-4.76,1.11,1.5,1.15,0.02,">1 nonsynonymous","N24G S41T P82D L188P",4
"lib1","SARS-CoV-2","AACTCCAACCCGCATC",4,66.7,6,-4.76,1.29,1.5,1.18,0.03,">1 nonsynonymous","I138S C158R",2
"lib1","SARS-CoV-2","AACTCCAAGAAATTTA",4,79.65,10.6,-0.16,0.08,2.87,1.05,0,">1 nonsynonymous","I28M S41Q G155T S200L",4
"lib1","SARS-CoV-2","AACTCCACGCGCCATT",2,73.45,10.87,0.1,0.05,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTCCAGAAAAGGCA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","N40* P149K",2
"lib1","SARS-CoV-2","AACTCCAGAACCTAAA",6,2.11,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib1","SARS-CoV-2","AACTCCAGGCCTCTAA",8,98.39,10.76,-0.01,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTCCATTCGACCCA",2,12.91,9.24,-1.53,0.24,2.02,1.17,0.02,">1 nonsynonymous","F8G K128R A190T",3
"lib1","SARS-CoV-2","AACTCCCACATCCTCT",2,25.52,9.77,-1,0.24,2.01,1.21,0.02,"1 nonsynonymous","R127N",1
"lib1","SARS-CoV-2","AACTCCCACCAGACTA",8,62.66,6.33,-4.43,0.52,1.5,1.16,0.02,">1 nonsynonymous","L60V K94E N120L A190N",4
"lib1","SARS-CoV-2","AACTCCCAGTCATAAA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","L60A L125R Y178*",3
"lib1","SARS-CoV-2","AACTCCCCAAGCTCTT",4,28.71,6.92,-3.84,0.55,1.5,1.14,0.06,">1 nonsynonymous","S41L C49T Y121G",3
"lib1","SARS-CoV-2","AACTCCCCCCTGGAAA",2,0.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","AACTCCCCTACTTTAG",2,40.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L38I W106R K128R Q176M",4
"lib1","SARS-CoV-2","AACTCCCTAATGGTGG",5,68,10.4,-0.36,0.05,2.88,1.01,0,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","AACTCCGAAAACGTTA",9,51.94,6.49,-4.28,0.56,1.5,1.22,0.03,">1 nonsynonymous","C61G P96W",2
"lib1","SARS-CoV-2","AACTCCGATACTTATC",1,33.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A145G P177N",2
"lib1","SARS-CoV-2","AACTCCGATCCAGATC",3,33.49,10.29,-0.47,0.07,2.98,1,0,">1 nonsynonymous","D98P Y123R",2
"lib1","SARS-CoV-2","AACTCCGCGAAACGAG",6,405.76,7.98,-2.79,0.12,1.5,1.1,0.01,">1 nonsynonymous","K87C N171I Q176L",3
"lib1","SARS-CoV-2","AACTCCGCTAACATAG",1,27.49,10.58,-0.18,0.11,2.8,1.18,0.01,"1 nonsynonymous","S41Q",1
"lib1","SARS-CoV-2","AACTCCGGAACCCCAT",2,95.33,9.05,-1.71,0.1,2.02,1.14,0,">1 nonsynonymous","I88V G152C C195S",3
"lib1","SARS-CoV-2","AACTCCGGAGTGAGGC",7,104.95,9.56,-1.2,0.11,2.5,1.12,0,">1 nonsynonymous","C31E Y123S",2
"lib1","SARS-CoV-2","AACTCCGGTGTCATTT",1,17.53,6.51,-4.25,0.7,1.5,1.13,0.04,">1 nonsynonymous","L5A Y93G",2
"lib1","SARS-CoV-2","AACTCCTAAAAAATAC",3,17.82,6.69,-4.07,0.65,1.5,1.24,0.04,">1 nonsynonymous","C61Q K94F E141P S184T",4
"lib1","SARS-CoV-2","AACTCCTATATTTGAT",4,2.23,NA,NA,NA,NA,NA,NA,"stop","D59* D90P C102Q F156L",4
"lib1","SARS-CoV-2","AACTCGAAAATTGAGA",1,33.01,9.99,-0.78,0.12,1.99,1.02,0,">1 nonsynonymous","E76G V173F",2
"lib1","SARS-CoV-2","AACTCGAACATACAAC",5,69.75,9.39,-1.37,0.22,1.59,1.22,0.02,">1 nonsynonymous","T46D L162C",2
"lib1","SARS-CoV-2","AACTCGAAGGTGACTT",3,22.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N1S F12S K132R Q176E",4
"lib1","SARS-CoV-2","AACTCGAATTGTAAAG",2,13.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6I C150R",2
"lib1","SARS-CoV-2","AACTCGACCAAACGAA",3,48.31,6.31,-4.45,0.66,1.5,1.07,0.03,">1 nonsynonymous","Y93F Y119G L162Q",3
"lib1","SARS-CoV-2","AACTCGACGTTAGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35M D90Y E135V P161*",4
"lib1","SARS-CoV-2","AACTCGACTATACTTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","AACTCGAGTTAAGCGG",2,11.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3S I80K S113Y N151S N157F",5
"lib1","SARS-CoV-2","AACTCGCAAGTTAAAC",9,120.05,6,-4.76,1.58,1.5,1.23,0.02,">1 nonsynonymous","G146L C158S",2
"lib1","SARS-CoV-2","AACTCGCAATTCCCTG",1,27.64,9.03,-1.74,0.32,1.5,1,0.04,">1 nonsynonymous","Y39L F99C",2
"lib1","SARS-CoV-2","AACTCGCACGTTAAAT",8,195.99,9.55,-1.22,0.05,2.83,1.08,0,">1 nonsynonymous","Y119V K198Q",2
"lib1","SARS-CoV-2","AACTCGCAGTAACGAA",1,5.37,8.39,-2.37,0.17,1.5,1,0.01,">1 nonsynonymous","Y35F R127H F134R E141I P197K",5
"lib1","SARS-CoV-2","AACTCGCATGCAGGTA",1,6.94,9.46,-1.31,0.15,2.93,1.1,0.01,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","AACTCGCCTAACGAAT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","A14G T55* V103Q",3
"lib1","SARS-CoV-2","AACTCGCGAGAGAGGA",3,52.49,6.2,-4.56,0.74,1.5,1.15,0.05,">1 nonsynonymous","F47G D112V Y165C",3
"lib1","SARS-CoV-2","AACTCGCGTCATACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25F T100L Y119F C158D",4
"lib1","SARS-CoV-2","AACTCGCTACTGTACC",2,7.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A A67F Q168A",3
"lib1","SARS-CoV-2","AACTCGCTATAAAAAC",22,270.2,10.13,-0.64,0.06,2.65,1.04,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","AACTCGCTTAATAATT",2,46.41,10.51,-0.25,0.04,2.91,1.05,0,">1 nonsynonymous","E10S G51R K56R",3
"lib1","SARS-CoV-2","AACTCGGCATAGAAAA",2,11.53,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","F47S S53K P82Q S129L Y165T",5
"lib1","SARS-CoV-2","AACTCGTACAACTTTC",1,68.08,9.94,-0.82,0.06,2.89,1.05,0,">1 nonsynonymous","L125P K198S",2
"lib1","SARS-CoV-2","AACTCGTCACCGGGAA",4,24.24,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","P7F D90R L183R",3
"lib1","SARS-CoV-2","AACTCGTCTCAATTTA",2,40.85,9.23,-1.53,0.1,2.9,1.1,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","AACTCGTTGTGCTAAG",1,14.16,6.65,-4.12,0.63,1.5,1.12,0.04,">1 nonsynonymous","C6S S69H D90N",3
"lib1","SARS-CoV-2","AACTCGTTTTCAGGCA",4,83.92,8.23,-2.54,0.16,2.61,1.13,0.01,">1 nonsynonymous","C61M I104M F126S P149N K199W",5
"lib1","SARS-CoV-2","AACTCTAAAACTTTTA",5,48.38,8.38,-2.39,0.14,1.5,1.11,0.01,">1 nonsynonymous","C6R P54V T63W",3
"lib1","SARS-CoV-2","AACTCTAACCCAGCCA",2,65.67,8.03,-2.73,0.14,2.14,1.14,0.01,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","AACTCTAACCCTTCTT",2,13.51,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13C C61N S69G N107F",4
"lib1","SARS-CoV-2","AACTCTACCAATAACC",1,23.19,6.07,-4.69,1.1,1.5,1.18,0.04,">1 nonsynonymous","F12L I28N T46Q Q84T T100R N120I R179P",7
"lib1","SARS-CoV-2","AACTCTACTCTTTTCA",3,1.34,NA,NA,NA,NA,NA,NA,"stop","K128M Y178*",2
"lib1","SARS-CoV-2","AACTCTAGAAAACTGT",5,6.93,10.56,-0.21,0.19,2.37,1.3,0.01,">1 nonsynonymous","F12W A14D V20K P96T D112F Y119H R136D P149F",8
"lib1","SARS-CoV-2","AACTCTAGTCCCTGTC",3,28.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88Y Y119S L162M",3
"lib1","SARS-CoV-2","AACTCTAGTTAGTGAA",1,10.81,6,-4.76,0.81,2.35,1.03,0,">1 nonsynonymous","G9L N58K G152S V173Y Q176A",5
"lib1","SARS-CoV-2","AACTCTAGTTTGTACC",1,11.91,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5D S36V G74L T140G",4
"lib1","SARS-CoV-2","AACTCTATCCATTAAT",6,77.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36F R124W E135V",3
"lib1","SARS-CoV-2","AACTCTATTCTTGGAT",1,16.08,9.79,-0.97,0.05,2.88,1.14,0,"1 nonsynonymous","L125S",1
"lib1","SARS-CoV-2","AACTCTCAACGTTCAT",14,358.45,10.15,-0.62,0.04,2.94,1.01,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","AACTCTCGCGAACACA",6,1.09,NA,NA,NA,NA,NA,NA,"stop","T3R A81Q T100P L131* I142N G146V C150L",7
"lib1","SARS-CoV-2","AACTCTCTAAGCCATA",6,75.9,8.46,-2.3,0.19,1.95,1.13,0.01,">1 nonsynonymous","E10F G74A",2
"lib1","SARS-CoV-2","AACTCTGAAATTATGG",6,68.77,10.52,-0.24,0.07,2.91,1,0,">1 nonsynonymous","P7E K48C",2
"lib1","SARS-CoV-2","AACTCTGAAGTACAAG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","N120E N157* T201W",3
"lib1","SARS-CoV-2","AACTCTGCCGAGACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6L T15* W23K R127A N151Q N157S",6
"lib1","SARS-CoV-2","AACTCTGCTACATCAA",1,54.19,10.56,-0.21,0.06,2.88,1.03,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","AACTCTGGGGAGCTAG",2,16.29,6.03,-4.74,0.96,1.56,1.16,0.01,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","AACTCTTATTCGAGTG",4,36.04,10.55,-0.22,0.06,2.83,1.09,0,">1 nonsynonymous","T3L N58T E154R",3
"lib1","SARS-CoV-2","AACTCTTCAGCCTTGG",3,6.51,10.74,-0.02,0.16,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTCTTCCAGTATAG",4,19.07,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V65Q A105R",2
"lib1","SARS-CoV-2","AACTGAAAACCAGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36F D59P D68* G116D S164M",5
"lib1","SARS-CoV-2","AACTGAAAACGATCTT",2,18.11,10.83,0.06,0.06,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTGAAAATGTTTGT",1,0.28,NA,NA,NA,NA,NA,NA,"stop","V77W S129T E154*",3
"lib1","SARS-CoV-2","AACTGAAAGTAAACCA",5,52.72,6,-4.76,2,3,1.18,0.02,">1 nonsynonymous","S129K F167R",2
"lib1","SARS-CoV-2","AACTGAAATATTAGTT",4,84.66,10.73,-0.03,0.06,2.91,1.04,0,">1 nonsynonymous","R27E P149T",2
"lib1","SARS-CoV-2","AACTGAAATGTGTTCT",4,29.95,8.6,-2.17,0.28,1.5,1,0.05,">1 nonsynonymous","N1E L131S E186D",3
"lib1","SARS-CoV-2","AACTGAAATTTTGCCT",1,3.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","AACTGAACAAGACTAC",2,8.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101Y",1
"lib1","SARS-CoV-2","AACTGAACCACTTCCG",8,87.47,6.45,-4.31,0.43,1.5,1.13,0.02,">1 nonsynonymous","S45A F99W Y165P",3
"lib1","SARS-CoV-2","AACTGAAGAAAATGCT",1,9.42,6,-4.76,2,3,1.33,0.02,">1 nonsynonymous","A33H D137F",2
"lib1","SARS-CoV-2","AACTGAAGTAATGTGA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","T46* E135K G166R",3
"lib1","SARS-CoV-2","AACTGAAGTATAGACG",2,0.46,NA,NA,NA,NA,NA,NA,"stop","K87* C102M T148P P191C K199I",5
"lib1","SARS-CoV-2","AACTGAATATAACCCT",11,176.09,10.36,-0.41,0.03,2.75,1.04,0,">1 nonsynonymous","A42Y I104H",2
"lib1","SARS-CoV-2","AACTGAATGAACAATA",1,54.32,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","Q79E Y123C G146V K198M",4
"lib1","SARS-CoV-2","AACTGACAAAGAATAG",5,16.57,10.58,-0.18,0.06,2.84,1.14,0,"1 nonsynonymous","G196A",1
"lib1","SARS-CoV-2","AACTGACAAAGCTAGG",1,8.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L57F D98F T148S N157F",4
"lib1","SARS-CoV-2","AACTGACAGCACAATC",4,106.49,10.78,0.01,0.07,2.87,1.08,0,"1 nonsynonymous","I72V",1
"lib1","SARS-CoV-2","AACTGACATACGTCAA",3,28.96,10.58,-0.19,0.1,2.82,1.05,0,"1 nonsynonymous","N4F",1
"lib1","SARS-CoV-2","AACTGACATTCAGGTA",5,18.92,6.74,-4.02,0.52,1.5,1.07,0.03,">1 nonsynonymous","T15S G51Y F70E C150K",4
"lib1","SARS-CoV-2","AACTGACATTGATCTA",2,6.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I G146D",2
"lib1","SARS-CoV-2","AACTGACCAATGCTAA",4,10.99,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G86S D98T I104Y R127S C150N",5
"lib1","SARS-CoV-2","AACTGACCATTTGCAA",12,83.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20L N157H",2
"lib1","SARS-CoV-2","AACTGACCGGTGTGCA",9,52.75,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G101R T170I G196Y",3
"lib1","SARS-CoV-2","AACTGACGAAAAATAA",2,37.98,6.12,-4.65,0.72,1.5,1.12,0.01,">1 nonsynonymous","I28G V65L T140K Y143S",4
"lib1","SARS-CoV-2","AACTGACGGTACCTGA",14,18.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13P A18R L60M E135L",4
"lib1","SARS-CoV-2","AACTGACGTAAAAACC",6,122.1,9.03,-1.73,0.12,1.75,1.16,0.01,">1 nonsynonymous","L38P E154L",2
"lib1","SARS-CoV-2","AACTGACGTTAATACT",3,123.58,10.77,0,0.03,2.88,1.03,0,">1 nonsynonymous","N1T T85K",2
"lib1","SARS-CoV-2","AACTGACTGTAGTTTT",1,17.58,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","T63W K87R D98P A105M T170K",5
"lib1","SARS-CoV-2","AACTGACTTATCAATT",4,12.65,6,-4.76,0.68,3,1.17,0.01,">1 nonsynonymous","W23R V103K",2
"lib1","SARS-CoV-2","AACTGACTTCATACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112T E141R N171H",3
"lib1","SARS-CoV-2","AACTGACTTTTAAGCC",4,8.44,6.37,-4.39,0.86,3,1.1,0,">1 nonsynonymous","E10G Y21N F47R D98S R127G",5
"lib1","SARS-CoV-2","AACTGAGAGATGACCC",3,64.47,10.13,-0.64,0.1,2.62,1,0,">1 nonsynonymous","A22D S36A D90F",3
"lib1","SARS-CoV-2","AACTGAGATCTACCAC",2,20.21,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C6V G51V F99C",3
"lib1","SARS-CoV-2","AACTGAGCACAACTCC",3,19.28,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P96L Y143Q N151P P169M",4
"lib1","SARS-CoV-2","AACTGAGCACTTGCAG",1,6.26,7.84,-2.92,0.88,1.5,1.07,0.06,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","AACTGAGCATCAGGGA",2,98.59,10.76,0,0.05,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTGAGCATGTTGAA",9,53.31,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","G101S S129R P149T",3
"lib1","SARS-CoV-2","AACTGAGCCGCAATCT",2,16.55,10.41,-0.36,0.08,2.7,1.1,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","AACTGAGCCTAAACCG",1,27.31,9.28,-1.48,0.09,2.58,1.14,0,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","AACTGAGGCCAGTATT",2,5.73,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","R25S S69D",2
"lib1","SARS-CoV-2","AACTGAGTCAAAATTA",7,64.59,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F44V L57K N157L",3
"lib1","SARS-CoV-2","AACTGAGTCAAGCAAA",6,11.28,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F44M S69R S113V G166V",4
"lib1","SARS-CoV-2","AACTGATAACTGTAAA",5,117.58,10.26,-0.5,0.05,2.86,1.01,0,">1 nonsynonymous","N120E N151C E186P",3
"lib1","SARS-CoV-2","AACTGATAATTACATA",3,26.81,10.69,-0.07,0.13,2.91,1.06,0.01,">1 nonsynonymous","A42G T140M",2
"lib1","SARS-CoV-2","AACTGATAATTTTCAA",5,106.96,10.55,-0.21,0.04,2.94,1.03,0,"1 nonsynonymous","I142F",1
"lib1","SARS-CoV-2","AACTGATAGCAAAGGT",1,29.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N1I Y35K G83L D98A Y121T",5
"lib1","SARS-CoV-2","AACTGATAGCAACACA",5,120.39,10.84,0.08,0.08,2.93,1.05,0,"1 nonsynonymous","A22Q",1
"lib1","SARS-CoV-2","AACTGATCAAACAATC",1,10.51,6.02,-4.74,1.92,1.5,1.13,0.05,">1 nonsynonymous","A14N F99M S139T C158F",4
"lib1","SARS-CoV-2","AACTGATCAGTGCACA",5,64.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5M V37A N120L C158V",4
"lib1","SARS-CoV-2","AACTGATCCATCAAAC",2,38.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54A Y175T",2
"lib1","SARS-CoV-2","AACTGATGAATTGAGC",6,145.33,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L5M K48Y F70L Y91P D98P",5
"lib1","SARS-CoV-2","AACTGATGACAATTAT",1,9.47,9.95,-0.82,0.31,1.68,1.07,0.04,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","AACTGATTGATCTTCA",5,52.87,9.18,-1.59,0.16,2,1.16,0.01,">1 nonsynonymous","Y35L Y123S G152I F160R",4
"lib1","SARS-CoV-2","AACTGCAAAACCGTGT",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I D90Y K114S K132Y G166R",5
"lib1","SARS-CoV-2","AACTGCAAAGCATCGA",1,50.27,10.45,-0.31,0.08,2.61,1,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","AACTGCAAGAATTACT",2,9.95,6,-4.76,0.58,3,1.05,0,"1 nonsynonymous","N92I",1
"lib1","SARS-CoV-2","AACTGCAATATTGAAC",1,35.65,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N157H V180H A190K",3
"lib1","SARS-CoV-2","AACTGCAATGATTGCC",2,75.64,10.7,-0.07,0.05,2.98,1,0,">1 nonsynonymous","L5P C61Y T100I",3
"lib1","SARS-CoV-2","AACTGCAATTAAAAAA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","G9T F12L I28G V71W P96* S108Y",6
"lib1","SARS-CoV-2","AACTGCACTAGGAGGT",1,50.46,6,-4.76,1.35,1.5,1.18,0.02,">1 nonsynonymous","V37A G86W W106M F167V S200F",5
"lib1","SARS-CoV-2","AACTGCATCCATGTGT",7,65.02,10.4,-0.36,0.06,2.92,1,0,">1 nonsynonymous","T3G S129L",2
"lib1","SARS-CoV-2","AACTGCATGCAAAAGG",4,44.3,10.71,-0.06,0.08,2.94,1.03,0,">1 nonsynonymous","P149T F160R",2
"lib1","SARS-CoV-2","AACTGCATGGAGAGAT",1,25.84,10.8,0.03,0.08,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTGCCGTGACTCGC",6,50.44,6.13,-4.63,1.25,1.5,1.23,0.03,">1 nonsynonymous","T85A F167N",2
"lib1","SARS-CoV-2","AACTGCCTCCAGAGAA",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24Q C49P A89R L95D",4
"lib1","SARS-CoV-2","AACTGCGATCTAATAT",3,19.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4R L95P",2
"lib1","SARS-CoV-2","AACTGCGCATGGCAAC",1,58.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7L K26S K94S Q144N G166M",5
"lib1","SARS-CoV-2","AACTGCGCTATCCACT",2,0,NA,NA,NA,NA,NA,NA,"stop","N40V K114* L122M",3
"lib1","SARS-CoV-2","AACTGCGGAAAATATA",5,0.25,NA,NA,NA,NA,NA,NA,"stop","G116* K198R",2
"lib1","SARS-CoV-2","AACTGCGGGCTTAAAG",13,55.36,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C61I D90I I104Q G116K",4
"lib1","SARS-CoV-2","AACTGCGTAAAACCAT",4,34.54,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2F C49W K94V N107R G155F V173M",6
"lib1","SARS-CoV-2","AACTGCGTCAACAGAA",6,78.13,9.82,-0.94,0.1,2.46,1.02,0,">1 nonsynonymous","D90Y D98A N171Q",3
"lib1","SARS-CoV-2","AACTGCGTGGGAAAGC",9,78.7,10.24,-0.53,0.1,2.23,1.02,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AACTGCTATAAAATAA",1,16.39,9.48,-1.28,0.2,2.48,1.18,0.02,">1 nonsynonymous","T15N Y35L G74Q T140K",4
"lib1","SARS-CoV-2","AACTGCTCGACATTGC",2,59.34,10.85,0.09,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTGCTGGCCAAATC",8,47.91,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G86N W106R S113M G172K",4
"lib1","SARS-CoV-2","AACTGGAACCCCCCGC",1,7.89,10.44,-0.32,0.07,2.89,1.09,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","AACTGGAATCATGAAA",1,18.79,10.36,-0.4,0.1,2.8,1.11,0,">1 nonsynonymous","N13R Y50W",2
"lib1","SARS-CoV-2","AACTGGACAGCAATTG",5,68.87,10.71,-0.06,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTGGAGAAATTAAG",2,22.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8T S19Q D90Y E135M L162W",5
"lib1","SARS-CoV-2","AACTGGAGAACATCAT",4,51.44,10.53,-0.24,0.05,2.86,1.08,0,"1 nonsynonymous","E135A",1
"lib1","SARS-CoV-2","AACTGGAGATTTTCAG",6,36.62,9.98,-0.78,0.13,2.25,1.05,0.01,">1 nonsynonymous","F47M R78L S129C S164Q",4
"lib1","SARS-CoV-2","AACTGGATAATAAAAC",2,0.31,NA,NA,NA,NA,NA,NA,"stop","L57F Y121*",2
"lib1","SARS-CoV-2","AACTGGATATTACCCG",3,22.13,8.87,-1.9,0.18,1.63,1.24,0.02,">1 nonsynonymous","T100L W106S P169M",3
"lib1","SARS-CoV-2","AACTGGCAAGTACAGT",4,22.94,6.02,-4.75,0.51,1.5,1.12,0,">1 nonsynonymous","A14C C49R A105P",3
"lib1","SARS-CoV-2","AACTGGCCGCACCAAC",1,16.92,7.59,-3.17,0.1,1.5,1.07,0,">1 nonsynonymous","T55K L95P L125G",3
"lib1","SARS-CoV-2","AACTGGCCGTGTACCA",3,26,8.81,-1.96,0.12,1.89,1.07,0.01,">1 nonsynonymous","A33E L60A K132D G174R",4
"lib1","SARS-CoV-2","AACTGGGACATACTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L G83E G116Y E186F",4
"lib1","SARS-CoV-2","AACTGGGAGTAACAAC",2,0.17,NA,NA,NA,NA,NA,NA,"stop","F8Y S69*",2
"lib1","SARS-CoV-2","AACTGGGCGCACTTAC",2,12.59,6,-4.76,2,3,1.36,0.02,">1 nonsynonymous","G9Q S41L C49G",3
"lib1","SARS-CoV-2","AACTGGGGCACGTACA",1,14.87,6.14,-4.63,1.05,1.5,1.16,0.06,">1 nonsynonymous","N30I Y159V V173S",3
"lib1","SARS-CoV-2","AACTGGGGGACGCCAG",5,68.94,8.04,-2.73,0.24,1.5,1.09,0.02,">1 nonsynonymous","S45T A105T S147I G155S Q168L",5
"lib1","SARS-CoV-2","AACTGGGTCATAACCT",4,0.76,NA,NA,NA,NA,NA,NA,"stop","C61* S69N S200I",3
"lib1","SARS-CoV-2","AACTGGTAATTGGAAA",6,96.9,10.48,-0.28,0.04,2.87,1.04,0,">1 nonsynonymous","D98I T201I",2
"lib1","SARS-CoV-2","AACTGGTAGTTTATTA",5,0.62,NA,NA,NA,NA,NA,NA,"stop","V37L F44L Q84W A89L A105*",5
"lib1","SARS-CoV-2","AACTGGTATACACAAA",3,28.13,10.69,-0.08,0.07,2.9,1.05,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","AACTGGTCAACGTAAA",4,17.65,10.81,0.05,0.16,2.79,1.09,0.01,">1 nonsynonymous","P54T Q84M T100C V153Y",4
"lib1","SARS-CoV-2","AACTGGTGTCCGCATA",4,42.04,7.84,-2.92,0.28,1.5,1.03,0.03,">1 nonsynonymous","L57K Q144W",2
"lib1","SARS-CoV-2","AACTGGTTAAAGCGAC",6,92.66,10.79,0.02,0.06,2.88,1.08,0,">1 nonsynonymous","D90K T201M",2
"lib1","SARS-CoV-2","AACTGGTTATGGATTG",2,21.87,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A33L G101A D137T V173T",4
"lib1","SARS-CoV-2","AACTGTAAAAAAAAAA",2,44.77,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S41F L57S Q176D",3
"lib1","SARS-CoV-2","AACTGTAAACAACCAG",8,96.67,6.15,-4.62,0.83,1.5,1.2,0.02,">1 nonsynonymous","G9N S41E V77K F134S",4
"lib1","SARS-CoV-2","AACTGTAACAGAATAA",7,114.26,7.82,-2.95,0.16,1.5,1.09,0.01,">1 nonsynonymous","S139F Y175M",2
"lib1","SARS-CoV-2","AACTGTAACATTCCTG",3,82.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28M P96H R124L E141C",4
"lib1","SARS-CoV-2","AACTGTAACATTGCTA",4,92.9,6,-4.76,1.55,1.5,1.2,0.01,">1 nonsynonymous","C158W T201H",2
"lib1","SARS-CoV-2","AACTGTAAGAAACGGC",2,134.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F134G T148L G172E",3
"lib1","SARS-CoV-2","AACTGTAAGAAGGCTA",3,37.98,7.35,-3.42,0.14,1.51,1.12,0,">1 nonsynonymous","S41Y F47L K87A V115Y G155V",5
"lib1","SARS-CoV-2","AACTGTACGCGAAGCG",3,0.68,NA,NA,NA,NA,NA,NA,"stop","V11G K87I N151P C158*",4
"lib1","SARS-CoV-2","AACTGTACTAACTTAA",3,110.73,8.18,-2.58,0.15,2.35,1.13,0.01,">1 nonsynonymous","K56R C61N N110M Y143C",4
"lib1","SARS-CoV-2","AACTGTACTGCGAGAC",2,53.08,9.11,-1.66,0.06,1.93,1.07,0,">1 nonsynonymous","K56R Y165N",2
"lib1","SARS-CoV-2","AACTGTACTTGCCCTT",4,63.55,6.3,-4.46,0.66,1.5,1.25,0.02,">1 nonsynonymous","R25L T63S",2
"lib1","SARS-CoV-2","AACTGTAGATCGTTCC",5,168.54,10.4,-0.36,0.02,2.9,1.02,0,">1 nonsynonymous","D90L K114S",2
"lib1","SARS-CoV-2","AACTGTATACTCTTCC",2,7.85,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T15N F62K D98R Y143K",4
"lib1","SARS-CoV-2","AACTGTCAGCAACAAA",2,48.19,10.68,-0.08,0.09,2.9,1.07,0,"1 nonsynonymous","F62I",1
"lib1","SARS-CoV-2","AACTGTCGATCAATGT",1,13.32,10.41,-0.36,0.09,2.9,1.02,0,"1 nonsynonymous","N13K",1
"lib1","SARS-CoV-2","AACTGTCGCGGTACCT",5,96.39,7.6,-3.16,0.16,1.67,1.14,0.01,">1 nonsynonymous","N1R R16T K56G G117I G146T",5
"lib1","SARS-CoV-2","AACTGTCGCGTTATGA",4,35.31,10.71,-0.06,0.04,2.92,1.03,0,"1 nonsynonymous","E10K",1
"lib1","SARS-CoV-2","AACTGTCGCTTTATCA",4,55.02,10.38,-0.38,0.07,2.9,1,0,">1 nonsynonymous","D112I P197S",2
"lib1","SARS-CoV-2","AACTGTCGGGATCTAT",8,2.04,NA,NA,NA,NA,NA,NA,"stop","Y39L P96R G116V T201*",4
"lib1","SARS-CoV-2","AACTGTCGTAGGTCGA",1,11.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D112Q G174E Y178H",3
"lib1","SARS-CoV-2","AACTGTCTTATAATAT",6,31.99,10.3,-0.46,0.06,2.91,1,0,">1 nonsynonymous","D97T Y178C",2
"lib1","SARS-CoV-2","AACTGTCTTTCAACAA",1,18.87,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A14E T55A V65G L95A E154D Y165F R179V",7
"lib1","SARS-CoV-2","AACTGTGAACGCAAAA",1,10.88,6,-4.76,2,1.5,1.16,0.03,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","AACTGTGAAGTCAAAA",9,94.38,9.82,-0.95,0.11,2.27,1.06,0,">1 nonsynonymous","F8L L60W P161A",3
"lib1","SARS-CoV-2","AACTGTGACAGTTATG",2,15.24,9.37,-1.39,0.16,2.46,1.05,0.01,">1 nonsynonymous","D90Q N118F",2
"lib1","SARS-CoV-2","AACTGTGACTTAGAAG",1,19.56,9.53,-1.23,0.12,1.75,1.18,0.01,">1 nonsynonymous","L57H T63P T201K",3
"lib1","SARS-CoV-2","AACTGTGCATCCAACA",1,68.05,10.72,-0.05,0.05,2.91,1.02,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","AACTGTGCCTATATAT",1,6.86,7.85,-2.91,0.24,1.5,1.14,0.02,">1 nonsynonymous","N64Q Y121K G152V",3
"lib1","SARS-CoV-2","AACTGTGCGACGCCTT",5,24.15,6,-4.76,1.22,1.5,1.16,0.02,">1 nonsynonymous","D90R Y143P F160L Q168W",4
"lib1","SARS-CoV-2","AACTGTGGCCACTGTC",5,0.05,NA,NA,NA,NA,NA,NA,"stop","A14K D34I F62L F134*",4
"lib1","SARS-CoV-2","AACTGTGGCCTAGAAA",5,57.27,8.75,-2.02,0.26,1.5,1.18,0.03,">1 nonsynonymous","Y123G P149R K199T",3
"lib1","SARS-CoV-2","AACTGTGGCTCCACCA",4,66.93,10.7,-0.07,0.1,2.83,1.12,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","AACTGTGTGACGGTTA",3,49.35,9.95,-0.82,0.08,2.49,1,0,">1 nonsynonymous","L5K T46I S139V T201R",4
"lib1","SARS-CoV-2","AACTGTGTGCCCGATC",2,0.52,NA,NA,NA,NA,NA,NA,"stop","Y91* A105P S139P T148R",4
"lib1","SARS-CoV-2","AACTGTTAACATGGAG",6,73.08,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A89S D112R",2
"lib1","SARS-CoV-2","AACTGTTAGACCTTCG",1,12.98,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","D68R Y119W S139N",3
"lib1","SARS-CoV-2","AACTGTTAGTAACGTA",9,6.52,NA,NA,NA,NA,NA,NA,"stop","T3* F12S P54G V71N Y123S G152F",6
"lib1","SARS-CoV-2","AACTGTTATTTAGACA",7,72.55,8.77,-1.99,0.08,2.75,1.09,0,">1 nonsynonymous","N40L N120P",2
"lib1","SARS-CoV-2","AACTGTTCCTCTGTTG",4,47.81,10.07,-0.7,0.07,2.09,1.05,0,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","AACTGTTCTACGCATG",10,201.43,10.21,-0.55,0.05,2.86,1,0,">1 nonsynonymous","D90W K114L",2
"lib1","SARS-CoV-2","AACTGTTGCTTAACTA",4,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G V11R S45Y Y50I T148G V173C",6
"lib1","SARS-CoV-2","AACTGTTTAATTCCGT",3,0.69,NA,NA,NA,NA,NA,NA,"stop","I2Y N107M L122N C158* E186C",5
"lib1","SARS-CoV-2","AACTGTTTCTGCTTGT",1,16.13,6.74,-4.03,0.44,2.1,1.1,0.04,">1 nonsynonymous","N64T V103D E186Y S200V",4
"lib1","SARS-CoV-2","AACTGTTTTTAAACGT",2,24.11,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","N1A A14R C61V P149Q F167V",5
"lib1","SARS-CoV-2","AACTTAAAAAACACCT",11,38.19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D59K A81V Y121E R179L",4
"lib1","SARS-CoV-2","AACTTAAAACCACATA",7,127.63,8.48,-2.28,0.18,1.5,1.08,0.01,">1 nonsynonymous","F12K K114R L122D",3
"lib1","SARS-CoV-2","AACTTAAAAGAAACAA",2,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A T15V A22S G83P F134S C158R G172V",7
"lib1","SARS-CoV-2","AACTTAAAAGCAAGTG",2,31.61,6.02,-4.74,1.17,1.5,1.19,0.03,">1 nonsynonymous","L57P P133W S184I",3
"lib1","SARS-CoV-2","AACTTAAAATCTGGTT",5,37.31,6.01,-4.75,0.94,1.5,1.1,0.02,">1 nonsynonymous","T55R C61L Y66M I80Y A89L F156T",6
"lib1","SARS-CoV-2","AACTTAAACACCAAAT",1,1.6,NA,NA,NA,NA,NA,NA,"stop","Y39A Q84* K87P P96G R127P",5
"lib1","SARS-CoV-2","AACTTAAAGAGATTAA",4,30.7,9.19,-1.58,0.22,1.62,1.12,0.02,">1 nonsynonymous","K87W R136E",2
"lib1","SARS-CoV-2","AACTTAAAGATAAAAC",2,22.77,8.38,-2.38,0.31,1.69,1.03,0.06,">1 nonsynonymous","R27P S45G P54I Q176A",4
"lib1","SARS-CoV-2","AACTTAAATCTAATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P Y91R",2
"lib1","SARS-CoV-2","AACTTAAATGGTATGG",4,22.87,10.7,-0.06,0.08,2.68,1.24,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTAAATTGACGTG",2,31.35,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G101L T140V",2
"lib1","SARS-CoV-2","AACTTAACAAACATCA",1,37.92,10.31,-0.46,0.07,2.94,1.05,0,">1 nonsynonymous","E10S N40M Q168A",3
"lib1","SARS-CoV-2","AACTTAACAACAACAG",3,8.65,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9R F17E S41H C158L G166T",5
"lib1","SARS-CoV-2","AACTTAACAGACATAT",1,13.9,10.54,-0.23,0.18,2.54,1.17,0.01,">1 nonsynonymous","T100K Y178N",2
"lib1","SARS-CoV-2","AACTTAACATTGTTTG",6,0.43,NA,NA,NA,NA,NA,NA,"stop","A14* N64R K114L K198A",4
"lib1","SARS-CoV-2","AACTTAACCATTTGTC",7,1.85,NA,NA,NA,NA,NA,NA,"stop","P54I W106L K128* A190G",4
"lib1","SARS-CoV-2","AACTTAACGCAATATG",11,133.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20T G86M A105S",3
"lib1","SARS-CoV-2","AACTTAACGCTTGTAA",5,2.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","AACTTAAGATTTAAGC",1,14.61,10.79,0.02,0.11,2.95,1,0.01,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","AACTTAAGCTAGGTCA",1,46.43,10.61,-0.15,0.03,2.98,1.01,0,">1 nonsynonymous","V32S A105S",2
"lib1","SARS-CoV-2","AACTTAAGGACAAAAA",5,49.11,7.13,-3.63,0.35,1.5,1.18,0.03,">1 nonsynonymous","N30K G83R T100N W106Y",4
"lib1","SARS-CoV-2","AACTTAAGTGATAAAA",5,39.12,6.54,-4.22,0.56,1.5,1.19,0.04,">1 nonsynonymous","G9S V180N",2
"lib1","SARS-CoV-2","AACTTAATAACCCTGT",3,48.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F62I I88R W106I",3
"lib1","SARS-CoV-2","AACTTAATACCTTAAC",1,10.63,8.22,-2.54,0.36,2.52,1.08,0.06,">1 nonsynonymous","V37I K94C P133E G152V T201I",5
"lib1","SARS-CoV-2","AACTTAATTAAATGTC",4,0,NA,NA,NA,NA,NA,NA,"stop","F12* D68N",2
"lib1","SARS-CoV-2","AACTTAATTCAAACAA",3,89.5,10.05,-0.71,0.06,2.77,1.08,0,">1 nonsynonymous","Y39H D98F",2
"lib1","SARS-CoV-2","AACTTAATTGTTTCAC",3,44.44,10.22,-0.55,0.08,2.79,1,0,">1 nonsynonymous","C6V T201M",2
"lib1","SARS-CoV-2","AACTTAATTTAAATTA",4,15.77,10.35,-0.42,0.16,2.28,1,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","AACTTAATTTCACAGA",6,34.27,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","I80R A89N",2
"lib1","SARS-CoV-2","AACTTAATTTCCAATG",4,18.5,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G101R W106E",2
"lib1","SARS-CoV-2","AACTTAATTTTGGTTC",1,28.9,10.86,0.09,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTACAAAAGATAA",1,33.15,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","P7H K56V L95Q",3
"lib1","SARS-CoV-2","AACTTACAAGACACCG",4,30.74,10.25,-0.51,0.07,2.82,1.05,0,">1 nonsynonymous","T46S K94A",2
"lib1","SARS-CoV-2","AACTTACAAGCTTAGT",4,74.3,10.7,-0.06,0.04,2.9,1.05,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","AACTTACACCCAAATA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","AACTTACACCGCTAAT",4,25.07,6.31,-4.46,0.67,1.5,1.04,0.03,">1 nonsynonymous","E76R Y91P",2
"lib1","SARS-CoV-2","AACTTACAGATAAATA",2,53.36,10.68,-0.09,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTACCGTATGATG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V V103P",2
"lib1","SARS-CoV-2","AACTTACCTCAAGACC",7,59.46,9.28,-1.49,0.4,1.5,1,0.08,">1 nonsynonymous","I28A I80R",2
"lib1","SARS-CoV-2","AACTTACGAGTACCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L38F K56* I142S",3
"lib1","SARS-CoV-2","AACTTACGTTTTAACG",8,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F V77L C158W V182Q",4
"lib1","SARS-CoV-2","AACTTACTAAGTCCAT",3,51.94,10.84,0.07,0.14,2.69,1.14,0.01,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","AACTTACTAATATGGA",1,47.4,10.82,0.05,0.06,2.88,1.07,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","AACTTACTACGCCGTA",7,16.04,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I2L F17N W106S",3
"lib1","SARS-CoV-2","AACTTACTACTCGAAG",1,35.31,10.85,0.09,0.06,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTACTCCTAACCA",10,116.04,8.98,-1.78,0.14,1.63,1.18,0.01,">1 nonsynonymous","F12E V32N",2
"lib1","SARS-CoV-2","AACTTACTTGTTTAAC",5,36.85,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","F8K G51M K87N",3
"lib1","SARS-CoV-2","AACTTAGATATTGAAA",3,28.14,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","T3C W106M F134I Q176R",4
"lib1","SARS-CoV-2","AACTTAGATCAAAGTT",2,28.79,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","E10A I80P Q176R P191S",4
"lib1","SARS-CoV-2","AACTTAGATGCAGTGC",10,18.95,6.41,-4.35,0.83,1.5,1.21,0.03,">1 nonsynonymous","D34R V103K C158N",3
"lib1","SARS-CoV-2","AACTTAGATGTGCCGC",8,126.26,10.24,-0.53,0.04,2.93,1.04,0,"1 nonsynonymous","L125G",1
"lib1","SARS-CoV-2","AACTTAGCAAAATCGA",3,32.51,10.88,0.12,0.11,2.93,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AACTTAGGGAAATACG",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18Q D112L C150R",3
"lib1","SARS-CoV-2","AACTTAGGGTCATATG",7,24.52,6.16,-4.6,1.21,1.5,1.22,0.04,">1 nonsynonymous","G83H I104S Y119L",3
"lib1","SARS-CoV-2","AACTTAGTATGTCGTT",2,19.98,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","G86W V153I T170N",3
"lib1","SARS-CoV-2","AACTTATAACGTACTA",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N40Y I80P Y91T",4
"lib1","SARS-CoV-2","AACTTATAACGTGATC",4,50.78,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55S K87V Y93E G101C F126G S139V Q168V",7
"lib1","SARS-CoV-2","AACTTATAACTAACCT",3,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P S69R D75W D98C N120K V173P Q176L",7
"lib1","SARS-CoV-2","AACTTATAAGAACTAC",7,39.62,10.07,-0.7,0.05,2.86,1,0,">1 nonsynonymous","K114N Y123A T201R",3
"lib1","SARS-CoV-2","AACTTATAATAGCAAA",1,10.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33S K56S Y91V P177T",4
"lib1","SARS-CoV-2","AACTTATAGGTATACA",7,70.08,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S69W C150I",2
"lib1","SARS-CoV-2","AACTTATATCAGAGTG",2,3.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AACTTATATGAATGTA",2,19.39,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","N13R N58V Q84V N118D G166L",5
"lib1","SARS-CoV-2","AACTTATATGCACGGT",2,1637.07,8.64,-2.12,0.18,1.5,1,0.01,">1 nonsynonymous","A105F G152L",2
"lib1","SARS-CoV-2","AACTTATATGCCATAA",8,27.11,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","S41N V71T R127T",3
"lib1","SARS-CoV-2","AACTTATATGTACAGT",14,116.93,9.32,-1.45,0.1,2.05,1.1,0,">1 nonsynonymous","T100L N107V V153N",3
"lib1","SARS-CoV-2","AACTTATCTCCGGTCC",2,23.65,10.43,-0.34,0.12,2.97,1.03,0.01,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","AACTTATTGCTTTGGA",2,22.04,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37S N64H G86Y F134A G152C",5
"lib1","SARS-CoV-2","AACTTATTGGGCGCTG",7,38.57,8.91,-1.85,0.16,1.5,1.16,0.01,">1 nonsynonymous","E10S S29V L38D",3
"lib1","SARS-CoV-2","AACTTATTTACCGTTT",2,17.53,7.21,-3.55,0.4,2.1,1.09,0.05,">1 nonsynonymous","F12C S45M G101E",3
"lib1","SARS-CoV-2","AACTTCAAAACGCTAG",3,54.97,10.75,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTCAAACAATGTA",6,36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13M W106K",2
"lib1","SARS-CoV-2","AACTTCAAACAGGGGA",2,10.27,10.72,-0.04,0.09,2.98,1,0,">1 nonsynonymous","T63Q Q84V",2
"lib1","SARS-CoV-2","AACTTCAAATACACCC",5,16.56,6.73,-4.04,0.5,1.51,1.09,0.03,">1 nonsynonymous","V71R N120P",2
"lib1","SARS-CoV-2","AACTTCAACACAAGTT",2,15.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N120K Y175P E186I A192G T201R",5
"lib1","SARS-CoV-2","AACTTCAACCTCTTTC",8,17.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V103K V181F",2
"lib1","SARS-CoV-2","AACTTCAACTGCGGGA",1,29.29,9.08,-1.69,0.17,2.43,1.1,0.01,">1 nonsynonymous","S41R D112E K198E",3
"lib1","SARS-CoV-2","AACTTCAATCCAAACG",5,4.49,NA,NA,NA,NA,NA,NA,"stop","G9K G51V Y121*",3
"lib1","SARS-CoV-2","AACTTCAATGCCGGCA",2,1.71,NA,NA,NA,NA,NA,NA,"stop","G9* K87D R127P F134D",4
"lib1","SARS-CoV-2","AACTTCACACTTATAG",2,5.54,10.46,-0.31,0.2,2.91,1.06,0.01,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","AACTTCACATGCCTAC",1,11.04,10.71,-0.05,0.12,2.78,1.19,0,"1 nonsynonymous","R78H",1
"lib1","SARS-CoV-2","AACTTCACGTCCGTCG",5,14.14,6,-4.76,2,1.5,1.12,0.05,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","AACTTCAGAGGTTCAG",6,39.52,10.62,-0.15,0.08,2.88,1.09,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","AACTTCAGCCGAGAAG",6,132.51,9.42,-1.35,0.07,2.85,1.09,0,"1 nonsynonymous","Y119I",1
"lib1","SARS-CoV-2","AACTTCATACAGTACT",2,6.72,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y50A F62M I104K",3
"lib1","SARS-CoV-2","AACTTCATAGATAAAT",3,82.02,10.68,-0.09,0.07,2.91,1.06,0,">1 nonsynonymous","I2S S53L",2
"lib1","SARS-CoV-2","AACTTCATATGCGTAG",1,7.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43G Y50V T85S",3
"lib1","SARS-CoV-2","AACTTCATTTATCATT",6,91.03,10.76,0,0.07,2.86,1.1,0,"1 nonsynonymous","V37T",1
"lib1","SARS-CoV-2","AACTTCATTTTCAAAA",5,65.4,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N40P I72D",2
"lib1","SARS-CoV-2","AACTTCCATACTAATG",3,37.19,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y91T F99N L122S",3
"lib1","SARS-CoV-2","AACTTCCATTGTGCTC",6,50.86,10.75,-0.02,0.1,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTCCCAACCGATG",1,20.79,10.27,-0.5,0.07,2.87,1.09,0,">1 nonsynonymous","F8Y C61Q F156L T201L",4
"lib1","SARS-CoV-2","AACTTCCCAATTTTGG",3,23.3,6.02,-4.74,2,1.5,1.16,0.03,">1 nonsynonymous","S108L D112S",2
"lib1","SARS-CoV-2","AACTTCCCGTCTGTCT",11,106.1,9.61,-1.16,0.08,1.88,1.09,0,">1 nonsynonymous","W106C K114S",2
"lib1","SARS-CoV-2","AACTTCGAACGTTGGC",2,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S T148L",2
"lib1","SARS-CoV-2","AACTTCGATAATTCCT",1,21.99,9.39,-1.37,0.19,1.88,1.22,0.02,">1 nonsynonymous","P96M S139T",2
"lib1","SARS-CoV-2","AACTTCGATGACCACA",3,13.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61M I88Y",2
"lib1","SARS-CoV-2","AACTTCGCCTACGCGA",2,18.01,6.34,-4.42,0.83,1.5,1.15,0.05,">1 nonsynonymous","Y93G K128N",2
"lib1","SARS-CoV-2","AACTTCGCTTGATATC",7,272.59,10.75,-0.02,0.06,2.83,1.09,0,"1 nonsynonymous","K56N",1
"lib1","SARS-CoV-2","AACTTCGTAAAGCTAG",3,31.38,9.72,-1.04,0.13,2.03,1.06,0.01,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","AACTTCGTATACTGGA",6,7.33,NA,NA,NA,NA,NA,NA,"stop","K26* S45P",2
"lib1","SARS-CoV-2","AACTTCGTTACATCTC",2,10.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T63S G117T F134E Y165C",4
"lib1","SARS-CoV-2","AACTTCGTTTGCAATC",3,94.63,9.34,-1.42,0.1,2.61,1.11,0,">1 nonsynonymous","Q144C C195A K199Y",3
"lib1","SARS-CoV-2","AACTTCTCAACGCGAG",7,108.61,6.04,-4.72,0.83,1.5,1.18,0.01,">1 nonsynonymous","R27G S45L L95N Y121S N130G",5
"lib1","SARS-CoV-2","AACTTCTCGAAGCAAG",3,56.45,10.71,-0.05,0.04,2.84,1.11,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","AACTTCTGACCCGAAA",7,14.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2T C6D F62I Y165L F185R",5
"lib1","SARS-CoV-2","AACTTCTGATGGGAAC",1,16.36,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R25G L60R G101F N120S T140V R179S",6
"lib1","SARS-CoV-2","AACTTCTTATGAATCA",3,39.56,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C31L A89T I104P S129K",4
"lib1","SARS-CoV-2","AACTTCTTTCCGTGTT",8,128.1,9.99,-0.77,0.08,2.34,1.05,0,">1 nonsynonymous","N4W D97T A105S T201E",4
"lib1","SARS-CoV-2","AACTTGAACATCCCGA",1,11.07,6,-4.76,1.46,1.5,1.09,0.03,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","AACTTGAAGCAATAAC",3,23.69,8.23,-2.53,0.46,1.5,1,0.08,">1 nonsynonymous","P82G D97R N107L N120Y G196K",5
"lib1","SARS-CoV-2","AACTTGAATCTTACGC",4,85.52,10.69,-0.07,0.08,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AACTTGACGGAGAAGG",1,49.92,10.63,-0.13,0.04,2.97,1.01,0,">1 nonsynonymous","L5T S41R",2
"lib1","SARS-CoV-2","AACTTGACTAACAGTA",2,50.11,10.64,-0.13,0.07,2.88,1.05,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","AACTTGAGAAACCTCG",2,19.21,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","R127I E135L P161T G166R",4
"lib1","SARS-CoV-2","AACTTGAGAGTGGAAA",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70R D137I",2
"lib1","SARS-CoV-2","AACTTGAGGTAAGGTT",1,16.63,10.24,-0.52,0.12,2.92,1.02,0,">1 nonsynonymous","T85M I142Y",2
"lib1","SARS-CoV-2","AACTTGAGTATACTAA",1,27.47,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C61D Y93S",2
"lib1","SARS-CoV-2","AACTTGAGTCTCCCAT",1,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","AACTTGATAATCACCA",6,71.77,10.82,0.05,0.05,2.91,1.05,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","AACTTGATCAAAAAAA",7,113.49,10.72,-0.05,0.05,2.88,1.05,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AACTTGATCATGCTAT",5,35.36,10.77,0,0.08,2.95,1.03,0,"1 nonsynonymous","K198A",1
"lib1","SARS-CoV-2","AACTTGATGATTTATC",6,69.54,10.24,-0.53,0.09,2.71,1.03,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","AACTTGATTGTTCCGG",1,26.22,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N4D Y21G L95S F156P T201N",5
"lib1","SARS-CoV-2","AACTTGCAACACCTGT",1,32.16,10.78,0.01,0.08,2.81,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AACTTGCAATGAATTG",3,63.55,8.5,-2.27,0.28,1.68,1.28,0.03,">1 nonsynonymous","L5R C61T N120Y E135W",4
"lib1","SARS-CoV-2","AACTTGCCATTGCCTA",2,37.7,10.77,0.01,0.05,2.91,1.04,0,"1 nonsynonymous","N110F",1
"lib1","SARS-CoV-2","AACTTGCGAATTCAAA",3,8.6,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V65F N92V N130Y E186L",4
"lib1","SARS-CoV-2","AACTTGCGTACGAAAT",3,20.31,6.48,-4.28,0.68,1.5,1.17,0.04,">1 nonsynonymous","G86S L95D",2
"lib1","SARS-CoV-2","AACTTGCTGGTGTGGC",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84V V103K G117A E141R T148K",5
"lib1","SARS-CoV-2","AACTTGGAATGGCTAT",2,25.16,10.79,0.03,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTGGATAGGAACT",1,5.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W D112G",2
"lib1","SARS-CoV-2","AACTTGGATCCTACTG",5,67.33,10.48,-0.29,0.06,2.96,1,0,">1 nonsynonymous","N1E D90L",2
"lib1","SARS-CoV-2","AACTTGGCCACCGCGG",2,32.04,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","L95C P177K P197K",3
"lib1","SARS-CoV-2","AACTTGGCTGCCTAAA",1,0.45,NA,NA,NA,NA,NA,NA,"stop","C6D I88T V103* E135* T201L",5
"lib1","SARS-CoV-2","AACTTGGGACCATACC",2,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K T201Y",2
"lib1","SARS-CoV-2","AACTTGGTGTGATTTA",4,98.42,8.46,-2.3,0.12,2.17,1.14,0.01,">1 nonsynonymous","N40S G117R S139K",3
"lib1","SARS-CoV-2","AACTTGTAAGTTCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib1","SARS-CoV-2","AACTTGTACTTACATA",5,52.94,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","I2C A89L I138F",3
"lib1","SARS-CoV-2","AACTTGTAGACGGTGA",5,50.49,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F17N K87S Y93C Y143N P149K S184M",6
"lib1","SARS-CoV-2","AACTTGTAGCAACTCA",5,13.59,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","Y93A T100S P149A",3
"lib1","SARS-CoV-2","AACTTGTGGAAAAACC",5,95.83,9.61,-1.16,0.09,1.91,1.09,0,">1 nonsynonymous","W106R Y121L",2
"lib1","SARS-CoV-2","AACTTGTTGACCAAAC",3,31.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6R S19T R27G Y121M",4
"lib1","SARS-CoV-2","AACTTTAAACGTGAAC",4,31.53,10.63,-0.14,0.05,2.93,1.01,0,"1 nonsynonymous","L95M",1
"lib1","SARS-CoV-2","AACTTTAACCATTGTA",5,12.61,6.5,-4.27,0.62,1.5,1.14,0.04,">1 nonsynonymous","R16V D90R F99H N109H",4
"lib1","SARS-CoV-2","AACTTTAACGTACAAC",2,71.07,10.69,-0.07,0.07,2.91,1.07,0,">1 nonsynonymous","K56M N64R Y66H L122Q",4
"lib1","SARS-CoV-2","AACTTTAATACCCAAA",4,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A22Q S36Y S41F K56V F99L F156A P169G",8
"lib1","SARS-CoV-2","AACTTTACACCGTAAT",5,36.97,10.45,-0.32,0.05,2.84,1.07,0,"1 nonsynonymous","L38Y",1
"lib1","SARS-CoV-2","AACTTTACCACGTGGG",9,21.28,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","C6P A14P D137I",3
"lib1","SARS-CoV-2","AACTTTACCGGCGTTT",11,82.67,10.63,-0.14,0.07,2.83,1.06,0,">1 nonsynonymous","S53I S184Y",2
"lib1","SARS-CoV-2","AACTTTACCTGCACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S C102N W106T L131K",4
"lib1","SARS-CoV-2","AACTTTACGTTCAGTA",2,8.98,6.97,-3.8,0.81,1.5,1.08,0.07,">1 nonsynonymous","A89S F99C",2
"lib1","SARS-CoV-2","AACTTTAGATATGCGA",3,48.28,10.78,0.01,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTTAGGGGTTCTG",2,19.32,6.01,-4.76,1.29,1.5,1.2,0.02,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","AACTTTAGTACAAATC",6,63.39,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R25F Y91D T140Y S184F",4
"lib1","SARS-CoV-2","AACTTTATGAACAATC",1,59.88,8.61,-2.15,0.14,2.21,1.07,0.01,">1 nonsynonymous","T15I N157S",2
"lib1","SARS-CoV-2","AACTTTATTCAAATGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114V Q144V",2
"lib1","SARS-CoV-2","AACTTTCAAGCTCAAA",4,57.98,8.83,-1.93,0.15,1.96,1.14,0.01,">1 nonsynonymous","K26L Y123N S184G",3
"lib1","SARS-CoV-2","AACTTTCAGGTTCATA",6,55.03,9.55,-1.21,0.12,2.16,1.11,0.01,">1 nonsynonymous","I2S D98K E141K G146W",4
"lib1","SARS-CoV-2","AACTTTCAGTACCTCT",10,134.16,10.75,-0.02,0.07,2.92,1.04,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","AACTTTCATGAGTAAT",2,13.03,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I2F D59Q G74A K87I K94E G155M",6
"lib1","SARS-CoV-2","AACTTTCATTTATTGA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","G9H R25L D112* K128L I138Y",5
"lib1","SARS-CoV-2","AACTTTCCAGTAATCG",2,15.61,10.91,0.14,0.09,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTTCCGACAAGAT",2,15.56,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K56N K114I Y123D R136Y",4
"lib1","SARS-CoV-2","AACTTTCTAGAACAAA",15,94.57,10.04,-0.73,0.09,2.65,1.02,0,">1 nonsynonymous","Y35Q K114Y",2
"lib1","SARS-CoV-2","AACTTTCTATAAAAAG",3,29.57,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","A22W K132P C150Y",3
"lib1","SARS-CoV-2","AACTTTGCCGTAACCT",10,2.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58G",1
"lib1","SARS-CoV-2","AACTTTGGCCCCTGAA",4,17.67,10.88,0.12,0.1,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AACTTTGGGAGTTAAG",1,5.08,6.8,-3.97,0.39,2.48,1,0.02,">1 nonsynonymous","F8S G86L Y93H F156P",4
"lib1","SARS-CoV-2","AACTTTGTCATAGGCC",2,127.04,10.86,0.09,0.07,2.91,1.05,0,">1 nonsynonymous","V37A T201N",2
"lib1","SARS-CoV-2","AACTTTGTTTACTAAG",5,92.8,10.42,-0.35,0.06,2.81,1.04,0,">1 nonsynonymous","Y121F S129F",2
"lib1","SARS-CoV-2","AACTTTTAAATATTAC",3,115.54,6.83,-3.94,0.21,1.5,1.13,0.01,">1 nonsynonymous","Y35C G83N D98C V103I N151R K199E",6
"lib1","SARS-CoV-2","AACTTTTAACAAAATG",8,187.84,10.64,-0.13,0.05,2.93,1.02,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","AACTTTTAACTAAGAA",7,38.15,6,-4.76,1.66,1.5,1.2,0.02,">1 nonsynonymous","C6F L95F S113Q A145D T170N",5
"lib1","SARS-CoV-2","AACTTTTACACAGAAT",8,123.35,9.78,-0.99,0.08,2.24,1.06,0,">1 nonsynonymous","Y35A S41Y G83V",3
"lib1","SARS-CoV-2","AACTTTTACTAAACCG",4,33.94,9.44,-1.33,0.27,1.5,1.07,0.03,">1 nonsynonymous","A18D K94G",2
"lib1","SARS-CoV-2","AACTTTTCAGCGTTGA",1,76.58,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A14V A22R I88N P96D Q144A T201V",6
"lib1","SARS-CoV-2","AACTTTTCGATAAGCA",5,23.34,6.38,-4.39,0.75,1.5,1.19,0.03,">1 nonsynonymous","G9P K94F P161A",3
"lib1","SARS-CoV-2","AACTTTTGAGGTATAA",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54V N120D I138K",3
"lib1","SARS-CoV-2","AACTTTTGCTATGAGG",2,10.19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15V S41Y D90K F134C",4
"lib1","SARS-CoV-2","AACTTTTGTAGGTCTA",5,185.27,9.46,-1.3,0.11,2.22,1.11,0,"1 nonsynonymous","P161C",1
"lib1","SARS-CoV-2","AACTTTTTACTGAACC",6,94.35,8.87,-1.89,0.11,2.49,1.15,0.01,">1 nonsynonymous","N13Y A33Y G117Q",3
"lib1","SARS-CoV-2","AACTTTTTATAATTTA",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88C S113P",2
"lib1","SARS-CoV-2","AACTTTTTTAACAATT",3,27.45,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","G51S F134H Y143T",3
"lib1","SARS-CoV-2","AACTTTTTTATAAACA",1,12.06,9.8,-0.97,0.12,2.86,1.03,0.01,">1 nonsynonymous","T63K L125S F134E",3
"lib1","SARS-CoV-2","AAGAAAAAAATAATAA",7,0.54,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib1","SARS-CoV-2","AAGAAAAAAATTACCT",2,23.51,7.11,-3.66,0.52,1.5,1.28,0.06,">1 nonsynonymous","T55S F99R P197V",3
"lib1","SARS-CoV-2","AAGAAAAAACGAAACT",8,152.49,10.43,-0.33,0.03,2.94,1.02,0,">1 nonsynonymous","K87R P149I",2
"lib1","SARS-CoV-2","AAGAAAAAATCGCAAA",7,120.48,10.85,0.08,0.08,2.9,1.05,0,"1 nonsynonymous","S164K",1
"lib1","SARS-CoV-2","AAGAAAAACAAACTCG",11,112.69,8.02,-2.75,0.19,1.61,1.17,0.01,">1 nonsynonymous","Y119L G155Y",2
"lib1","SARS-CoV-2","AAGAAAAACATGAGAT",7,26.78,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","F12C D68T G83K E154F",4
"lib1","SARS-CoV-2","AAGAAAAACGCACCCA",10,114.67,10.03,-0.73,0.08,2.51,1.01,0,">1 nonsynonymous","C61K F134I",2
"lib1","SARS-CoV-2","AAGAAAAACTAAAAAC",1,3.44,NA,NA,NA,NA,NA,NA,"stop","T100L E141V T148S F160*",4
"lib1","SARS-CoV-2","AAGAAAAACTAGGTGG",5,0.17,NA,NA,NA,NA,NA,NA,"stop","I28F D90L T100*",3
"lib1","SARS-CoV-2","AAGAAAAAGGCACCAA",3,20.56,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F99S C158S",2
"lib1","SARS-CoV-2","AAGAAAAATACATTAT",5,46.08,6.01,-4.75,1.1,1.5,1.27,0.03,">1 nonsynonymous","L57R Y91A K128V",3
"lib1","SARS-CoV-2","AAGAAAAATAGATGAT",4,12.39,8.31,-2.46,0.34,1.5,1.13,0.05,">1 nonsynonymous","C49F T55F K87H D97C K128N",5
"lib1","SARS-CoV-2","AAGAAAAATTACGAAA",2,24.5,9.9,-0.86,0.07,2.87,1.06,0,">1 nonsynonymous","N1R K87E",2
"lib1","SARS-CoV-2","AAGAAAAATTCGAGAC",5,55.7,10.85,0.09,0.09,2.89,1.06,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","AAGAAAACACAAGACC",6,74.3,10.41,-0.35,0.07,2.9,1.04,0,">1 nonsynonymous","T55C T140S",2
"lib1","SARS-CoV-2","AAGAAAACACCAATTG",9,51.86,6.11,-4.66,0.8,1.5,1.23,0.02,">1 nonsynonymous","G86L D98I V182F",3
"lib1","SARS-CoV-2","AAGAAAACCATCTGGT",5,91.09,9.55,-1.22,0.08,1.98,1.1,0,">1 nonsynonymous","I2C A33D F44D K198L",4
"lib1","SARS-CoV-2","AAGAAAACCGATATCA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","G9A I28V K114L T201*",4
"lib1","SARS-CoV-2","AAGAAAACCGCGAACG",1,0.16,NA,NA,NA,NA,NA,NA,"stop","I2F S36* G51D C195F",4
"lib1","SARS-CoV-2","AAGAAAACTGGAACAT",5,19.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2S L162A L183S",3
"lib1","SARS-CoV-2","AAGAAAACTTAACAAC",5,120.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A89N D137S Y178S",3
"lib1","SARS-CoV-2","AAGAAAAGAATAAGGC",4,119.98,10.13,-0.63,0.08,2.75,1,0,">1 nonsynonymous","T63P D98G K198A",3
"lib1","SARS-CoV-2","AAGAAAAGACAAATTG",7,5.02,NA,NA,NA,NA,NA,NA,"stop","L5K G51H D68*",3
"lib1","SARS-CoV-2","AAGAAAAGCTAACTGA",9,1.78,NA,NA,NA,NA,NA,NA,"stop","C6I S19A D68* G83V C150R",5
"lib1","SARS-CoV-2","AAGAAAAGGAAAAATA",8,43.24,6,-4.76,2,1.5,1.45,0.07,">1 nonsynonymous","K26L C49N",2
"lib1","SARS-CoV-2","AAGAAAAGGAATGAAG",1,15.32,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A18M D34N L125N I142E",4
"lib1","SARS-CoV-2","AAGAAAAGGACCAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","E10Q C31S N40E S147*",4
"lib1","SARS-CoV-2","AAGAAAAGGATATAAG",3,28.11,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I2A R27D Y35C T55H Y93R F167M H189Y",7
"lib1","SARS-CoV-2","AAGAAAAGGCATATAT",1,6.42,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68N G117S",2
"lib1","SARS-CoV-2","AAGAAAAGTAACTAAC",1,24.67,9.45,-1.32,0.07,2.84,1.06,0,">1 nonsynonymous","T63A G116C",2
"lib1","SARS-CoV-2","AAGAAAAGTACCTGTA",1,43.9,8.9,-1.86,0.18,1.63,1.12,0.02,">1 nonsynonymous","W23A G196A",2
"lib1","SARS-CoV-2","AAGAAAAGTAGTAGAA",2,8.2,6.38,-4.38,1.47,3,1.17,0.02,">1 nonsynonymous","N1T C6R D97M A105M K114N N130T I138M",7
"lib1","SARS-CoV-2","AAGAAAATAACTCCAG",6,20.62,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","V20L D90V R136A G172S V180A",5
"lib1","SARS-CoV-2","AAGAAAATACACATTG",1,0.27,NA,NA,NA,NA,NA,NA,"stop","P54H E135*",2
"lib1","SARS-CoV-2","AAGAAAATACTTCGAA",1,25.92,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","L60K Y119S Y143F Q176F",4
"lib1","SARS-CoV-2","AAGAAAATATTTTTCG",2,46.62,9.58,-1.19,0.1,2.72,1.1,0,">1 nonsynonymous","N1T Y119K E141R",3
"lib1","SARS-CoV-2","AAGAAAATCAACAAAC",4,67.16,9.07,-1.69,0.19,1.67,1.2,0.01,">1 nonsynonymous","G51Y Q144H",2
"lib1","SARS-CoV-2","AAGAAAATCATTAGTC",3,0.22,NA,NA,NA,NA,NA,NA,"stop","L38A D59G T85V P149G T201*",5
"lib1","SARS-CoV-2","AAGAAAATCCAAACCA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","S19G I72* Y93S Y119T F156I",5
"lib1","SARS-CoV-2","AAGAAAATCTATCGCG",9,45.16,9.99,-0.77,0.09,2.63,1.04,0,">1 nonsynonymous","R16W Y91L D98T N130S",4
"lib1","SARS-CoV-2","AAGAAAATGGCATTCT",1,25.45,10.42,-0.34,0.07,2.87,1.08,0,">1 nonsynonymous","S29E N40Y",2
"lib1","SARS-CoV-2","AAGAAAATTGGACTAT",7,56.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6K S45Y L60P I142D P161I",5
"lib1","SARS-CoV-2","AAGAAAATTTACACAG",1,41.92,10.83,0.07,0.12,2.91,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAACAAAATATCT",3,13.13,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","T3V V77N I88F D97S S113I",5
"lib1","SARS-CoV-2","AAGAAACAAATGACGG",2,7.64,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","K26S P82Q",2
"lib1","SARS-CoV-2","AAGAAACAAGAAAATT",1,36.45,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5I W23L V77M",3
"lib1","SARS-CoV-2","AAGAAACAATTATAGT",3,27.7,10.77,0.01,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAACACACAAATC",2,36.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31D S45K N110P P149S Q168K",5
"lib1","SARS-CoV-2","AAGAAACACCTTTGCA",5,139.41,10.61,-0.15,0.04,2.87,1.07,0,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","AAGAAACAGCACATGT",1,9.4,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V103E K114N S129T N151S",4
"lib1","SARS-CoV-2","AAGAAACATCAAATAT",1,17.21,10.32,-0.44,0.08,2.93,1.03,0.01,">1 nonsynonymous","K56G T63R N120L",3
"lib1","SARS-CoV-2","AAGAAACATCGCACCC",5,44.51,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A89L K114F G166D",3
"lib1","SARS-CoV-2","AAGAAACCACTTTCAC",3,4.11,NA,NA,NA,NA,NA,NA,"stop","D68G Y93Q G101N E141* L188P",5
"lib1","SARS-CoV-2","AAGAAACCATAAAAAG",3,58.29,8.98,-1.79,0.2,1.51,1.13,0.02,"1 nonsynonymous","W23Q",1
"lib1","SARS-CoV-2","AAGAAACCCGATTAAA",9,54.71,6.47,-4.3,0.59,1.5,1.21,0.02,">1 nonsynonymous","T15S D90V W106P",3
"lib1","SARS-CoV-2","AAGAAACGAACACAGG",5,75.18,10.61,-0.16,0.04,2.93,1,0,">1 nonsynonymous","T15R L187V",2
"lib1","SARS-CoV-2","AAGAAACGAACCTTTA",6,70.92,10.75,-0.02,0.07,2.86,1.04,0,"1 nonsynonymous","R27M",1
"lib1","SARS-CoV-2","AAGAAACGCAAGGACC",5,124.57,10.05,-0.72,0.09,2.14,1.02,0,">1 nonsynonymous","N4M S45A D98L",3
"lib1","SARS-CoV-2","AAGAAACGCGACTTTA",4,37.93,10.08,-0.69,0.15,2.5,1.06,0.01,">1 nonsynonymous","A81T G196C",2
"lib1","SARS-CoV-2","AAGAAACGCGCCCCGG",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16G S41M Y50G L125Y P133L",5
"lib1","SARS-CoV-2","AAGAAACGGATACACA",5,92.14,10.26,-0.5,0.04,2.93,1,0,">1 nonsynonymous","A33R A42D C61R",3
"lib1","SARS-CoV-2","AAGAAACTCCCGCCAT",2,47.83,7.75,-3.01,0.28,1.5,1.11,0.02,">1 nonsynonymous","D112G Y119E",2
"lib1","SARS-CoV-2","AAGAAACTTGGTTAGT",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P F167I T201A",3
"lib1","SARS-CoV-2","AAGAAAGACCGCGAAA",2,53.41,10.65,-0.11,0.04,2.86,1.05,0,">1 nonsynonymous","A33V L122T N151D",3
"lib1","SARS-CoV-2","AAGAAAGACTATGCAT",2,16.86,9.91,-0.86,0.16,2.02,1,0.01,">1 nonsynonymous","S45V C61P Q84R",3
"lib1","SARS-CoV-2","AAGAAAGACTCAACCC",4,142.69,9.27,-1.5,0.08,2.82,1.14,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","AAGAAAGAGTAACCAC",7,2.59,NA,NA,NA,NA,NA,NA,"stop","F12D D97* V103H Y165I",4
"lib1","SARS-CoV-2","AAGAAAGCAAAACTAC",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97N S139F N151L F185N",4
"lib1","SARS-CoV-2","AAGAAAGCAATGGAGC",2,15.35,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","D68E P82K P197K",3
"lib1","SARS-CoV-2","AAGAAAGCCCATAACT",2,44.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L57Y A105L Y143F",3
"lib1","SARS-CoV-2","AAGAAAGCGGTAGCAG",8,2.7,NA,NA,NA,NA,NA,NA,"stop","Y50D V115* N157T",3
"lib1","SARS-CoV-2","AAGAAAGCTCGACTAA",3,43.64,10.75,-0.02,0.07,2.96,1.01,0,">1 nonsynonymous","D90L T201S",2
"lib1","SARS-CoV-2","AAGAAAGCTGGTATAA",4,19,8.42,-2.35,0.37,1.5,1.07,0.07,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","AAGAAAGGAGCAAAAA",2,3.72,NA,NA,NA,NA,NA,NA,"stop","D68E Y93N I104* E141R",4
"lib1","SARS-CoV-2","AAGAAAGGAGCTGTAA",2,35.77,10.66,-0.1,0.1,2.77,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AAGAAAGGATTTTCAG",2,1.06,NA,NA,NA,NA,NA,NA,"stop","S19* F44R T55S",3
"lib1","SARS-CoV-2","AAGAAAGGCACAGGCT",2,14.56,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3L G83T A89L V103Y V182H",5
"lib1","SARS-CoV-2","AAGAAAGTAGAACTGG",3,54.66,6.1,-4.66,0.66,1.5,1.16,0.01,">1 nonsynonymous","V20R A42F V52Y D59L N130K P177A",6
"lib1","SARS-CoV-2","AAGAAAGTATGTCGTT",2,40.24,10.52,-0.24,0.11,2.81,1,0.01,">1 nonsynonymous","C102I S129T S200R",3
"lib1","SARS-CoV-2","AAGAAAGTCTTACATT",2,23.62,11.02,0.26,0.1,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAAGTTCTATAAA",3,0.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAATAAATTCATC",8,77.8,10.77,0.01,0.09,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAATAACAAAGTC",2,90.43,10.52,-0.24,0.06,2.78,1.08,0,"1 nonsynonymous","K26N",1
"lib1","SARS-CoV-2","AAGAAATAAGCTTACC",5,18.05,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K48T D75K A105L S113V D137M",5
"lib1","SARS-CoV-2","AAGAAATACTAACATA",1,39.63,9.82,-0.94,0.04,2.98,1.01,0,"1 nonsynonymous","Y143W",1
"lib1","SARS-CoV-2","AAGAAATACTATAATT",2,5.92,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F99V I104E",2
"lib1","SARS-CoV-2","AAGAAATACTATATAA",5,3.68,NA,NA,NA,NA,NA,NA,"stop","E10F R73G T85* P149F",4
"lib1","SARS-CoV-2","AAGAAATACTTATTAT",5,82.42,10.28,-0.49,0.05,2.81,1.04,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","AAGAAATAGACACCCA",8,97,10.47,-0.29,0.03,2.86,1.03,0,"1 nonsynonymous","T15I",1
"lib1","SARS-CoV-2","AAGAAATAGCCTAGTA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","C31* V37A R78F D112N",4
"lib1","SARS-CoV-2","AAGAAATAGTAGATAT",3,22.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6Q V52D N64R G116Y Y165L",5
"lib1","SARS-CoV-2","AAGAAATAGTCATTAA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","T3L V11Q W106* Q144I",4
"lib1","SARS-CoV-2","AAGAAATATCAAGTAA",1,15.8,9.81,-0.95,0.2,1.78,1.05,0.04,">1 nonsynonymous","L60S W106L",2
"lib1","SARS-CoV-2","AAGAAATATTCCTAAG",3,0.82,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","AAGAAATCAAAAGCCC",3,34.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40S L57G T100M W106A P197N",5
"lib1","SARS-CoV-2","AAGAAATCAACAAAGA",4,47.31,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V37G V103W",2
"lib1","SARS-CoV-2","AAGAAATCACAAGCAC",1,38.87,10.76,0,0.1,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAATCACCTTGGT",4,76.94,10.85,0.08,0.05,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAATCAGGTCACG",3,111.44,10.76,0,0.05,2.91,1.06,0,"1 nonsynonymous","T148A",1
"lib1","SARS-CoV-2","AAGAAATCGACAATAT",4,56.02,8.7,-2.07,0.27,1.54,1.11,0.03,">1 nonsynonymous","V71M S164L",2
"lib1","SARS-CoV-2","AAGAAATCTACAAGGC",6,28.38,6,-4.76,2,3,1.22,0,">1 nonsynonymous","T3V F12Q L122K V182F",4
"lib1","SARS-CoV-2","AAGAAATCTGACGAGT",3,9.29,8.62,-2.14,0.37,1.64,1.26,0.06,">1 nonsynonymous","S45A N120T E135S",3
"lib1","SARS-CoV-2","AAGAAATCTGATCATG",3,16.44,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","S19V P82Y",2
"lib1","SARS-CoV-2","AAGAAATGAAGTGATT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib1","SARS-CoV-2","AAGAAATGCAAACCCC",3,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W C195F",2
"lib1","SARS-CoV-2","AAGAAATGCTCCCACG",10,61.4,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N1P G86V Q144M",3
"lib1","SARS-CoV-2","AAGAAATGGAGTGACA",4,90.25,9.84,-0.93,0.12,1.94,1.08,0.01,">1 nonsynonymous","V11D G152N",2
"lib1","SARS-CoV-2","AAGAAATTACTCAGTT",4,25.17,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","L60T G83C L95A T100E C158L",5
"lib1","SARS-CoV-2","AAGAAATTGACGCCTA",1,60.68,10.78,0.02,0.09,2.86,1.07,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","AAGAAATTGGTTAGTG",8,0.35,NA,NA,NA,NA,NA,NA,"stop","F44* K114T Q163Y",3
"lib1","SARS-CoV-2","AAGAAATTTATACTCG",1,58.12,10.76,-0.01,0.07,2.87,1.09,0,">1 nonsynonymous","S41A T55E",2
"lib1","SARS-CoV-2","AAGAACAAAACAAAAG",3,49.91,10.8,0.04,0.07,2.94,1.04,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","AAGAACAAAAGCAAAC",1,5.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F R179L K198V",3
"lib1","SARS-CoV-2","AAGAACAACCAAGGAA",2,12.03,6.3,-4.47,0.43,3,1.1,0.01,">1 nonsynonymous","N4S V37R D97L R127E D137I",5
"lib1","SARS-CoV-2","AAGAACAATGCGATGT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V103* Y178H",2
"lib1","SARS-CoV-2","AAGAACAATGGATTAT",4,67.47,10.83,0.06,0.08,2.93,1.04,0,">1 nonsynonymous","Y66W T201Q",2
"lib1","SARS-CoV-2","AAGAACAATGTAATCA",3,67.11,8.7,-2.06,0.13,2.29,1.07,0.01,">1 nonsynonymous","G83L N107S Y119R",3
"lib1","SARS-CoV-2","AAGAACACAGAAAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* V37F N92S F99N R179S",5
"lib1","SARS-CoV-2","AAGAACACTCAGTTGG",6,139.01,6.44,-4.33,0.38,1.5,1.11,0.01,">1 nonsynonymous","N64R Q144C N157M T201P",4
"lib1","SARS-CoV-2","AAGAACACTGAATTAA",5,46.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2A I28S F44S L60S I80K Y119R A145T P149K",8
"lib1","SARS-CoV-2","AAGAACACTGGTATCG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","K56* N92R P149D R179Q",4
"lib1","SARS-CoV-2","AAGAACAGATCTGAAT",2,11.14,9.22,-1.54,0.15,2.77,1.23,0.01,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","AAGAACAGATTTAGGT",2,24.47,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35E I88N G101H",3
"lib1","SARS-CoV-2","AAGAACATAAATCCAT",1,7.18,7.32,-3.44,0.37,1.5,1.19,0.07,">1 nonsynonymous","N4I V182A",2
"lib1","SARS-CoV-2","AAGAACATAACCATCG",5,80.16,9.94,-0.82,0.07,2.74,1.01,0,">1 nonsynonymous","V11C Y35L D98S P197I",4
"lib1","SARS-CoV-2","AAGAACATAATTACGC",6,90.19,10.51,-0.25,0.07,2.86,1.05,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","AAGAACATACTACGCA",1,66.54,10.66,-0.1,0.08,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAACATAGAAGAGA",4,49.6,7.6,-3.17,0.32,1.5,1.15,0.03,">1 nonsynonymous","T3Q V37Q Y66N F126V R136A T148M",6
"lib1","SARS-CoV-2","AAGAACATCTCTATTC",2,6.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44I C61Y I104L V182D",4
"lib1","SARS-CoV-2","AAGAACCAAACGCAAT",6,55.22,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A33L V103C I142T T170C",4
"lib1","SARS-CoV-2","AAGAACCAACGGAATT",4,0.39,NA,NA,NA,NA,NA,NA,"stop","V37W V115*",2
"lib1","SARS-CoV-2","AAGAACCAAGACTAAA",2,8.84,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","A14G S19W Q79S",3
"lib1","SARS-CoV-2","AAGAACCAAGGACCGA",6,51.83,10.66,-0.1,0.06,2.89,1.06,0,">1 nonsynonymous","S139G C195N",2
"lib1","SARS-CoV-2","AAGAACCACCACCAGT",2,19.41,10.93,0.16,0.07,2.97,1,0,">1 nonsynonymous","A33W Q84G",2
"lib1","SARS-CoV-2","AAGAACCAGAAACGGC",1,77.21,10.77,0,0.06,2.96,1,0,">1 nonsynonymous","P54T D98S",2
"lib1","SARS-CoV-2","AAGAACCATTTAAAAC",6,54.48,9.62,-1.15,0.21,1.75,1.1,0.01,">1 nonsynonymous","F99L E141I",2
"lib1","SARS-CoV-2","AAGAACCCATTATCGG",5,1.68,NA,NA,NA,NA,NA,NA,"stop","P7* D90S N109L R124T G155P",5
"lib1","SARS-CoV-2","AAGAACCCTTCAAATT",1,31.95,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","R78K I88K",2
"lib1","SARS-CoV-2","AAGAACCGACTCTGCG",2,22.34,10.51,-0.26,0.09,2.83,1.17,0.01,"1 nonsynonymous","V115G",1
"lib1","SARS-CoV-2","AAGAACCTAAAGGCTG",1,65.37,8.51,-2.25,0.16,1.75,1.1,0.01,">1 nonsynonymous","G9L P177S G196T",3
"lib1","SARS-CoV-2","AAGAACCTAATCAAAT",2,5.3,9.93,-0.83,0.88,2.35,1.2,0.06,">1 nonsynonymous","D75N L95R A190V",3
"lib1","SARS-CoV-2","AAGAACCTAGAAAAAG",12,51.16,10.66,-0.1,0.07,2.79,1.16,0,"1 nonsynonymous","G152K",1
"lib1","SARS-CoV-2","AAGAACGAGGTGGCAA",4,73.37,10.78,0.01,0.06,2.99,1,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","AAGAACGCAGTTAGCT",1,11.47,10.95,0.19,0.09,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGAACGCCAACTCCG",1,23.03,10.09,-0.68,0.11,2.35,1,0,">1 nonsynonymous","T15S G51L",2
"lib1","SARS-CoV-2","AAGAACGCCTTACCCG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A33S A42Y L57*",3
"lib1","SARS-CoV-2","AAGAACGCTAAATGAC",4,112.39,7.5,-3.26,0.12,1.83,1.07,0,">1 nonsynonymous","C61K K87L Y143S F156N",4
"lib1","SARS-CoV-2","AAGAACGCTAATCTGA",2,50.7,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","I2R Y35L L131K C158S",4
"lib1","SARS-CoV-2","AAGAACGCTGAATATT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5R G74* I80G A89E A105V N107S V115S",7
"lib1","SARS-CoV-2","AAGAACGCTGGTATTA",1,21.57,10.84,0.08,0.1,2.87,1.04,0,">1 nonsynonymous","I2D Y66W",2
"lib1","SARS-CoV-2","AAGAACGCTTAACTCG",3,39.98,10.66,-0.1,0.1,2.79,1.12,0,">1 nonsynonymous","N4P V37R L60Q K198H",4
"lib1","SARS-CoV-2","AAGAACGGAAATCTGG",7,41.86,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","V77I Y119V E154Y Q163P",4
"lib1","SARS-CoV-2","AAGAACGGATACACAA",4,75.9,10.83,0.06,0.08,2.9,1.05,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","AAGAACGGATATGTCT",2,50.05,8.6,-2.16,0.12,2.65,1.06,0.01,">1 nonsynonymous","L5S T46Y T63N Y121L K128L F156S",6
"lib1","SARS-CoV-2","AAGAACGGGTACATAC",1,48.38,10.78,0.02,0.05,2.94,1.01,0,">1 nonsynonymous","N64Y E186V T201V",3
"lib1","SARS-CoV-2","AAGAACGGTACAGGCT",1,5.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S S139F A145Y V173M",4
"lib1","SARS-CoV-2","AAGAACGGTGTTATGT",2,11.3,8.7,-2.07,0.2,2.31,1.2,0.02,">1 nonsynonymous","P161A G174F",2
"lib1","SARS-CoV-2","AAGAACGTAAACAAGC",7,57.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G S41T W106N",3
"lib1","SARS-CoV-2","AAGAACGTGCCACCCT",7,3.02,NA,NA,NA,NA,NA,NA,"stop","E10* E135G E141G F160T",4
"lib1","SARS-CoV-2","AAGAACGTTATGGAAG",1,61.14,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C6R T46G T100A L122Q",4
"lib1","SARS-CoV-2","AAGAACTACATGTAGG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92I C150S Y178L",3
"lib1","SARS-CoV-2","AAGAACTATTGAAAAC",6,9.58,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S19R K56Y W106G G155P",4
"lib1","SARS-CoV-2","AAGAACTCGTGAATGA",5,32.14,6.27,-4.49,0.61,1.5,1.16,0.02,">1 nonsynonymous","T85I K94M W106M S129V P149S N157Y",6
"lib1","SARS-CoV-2","AAGAACTTACATTCGC",1,21.62,10.72,-0.04,0.35,2.25,1.04,0.04,">1 nonsynonymous","L60S Y93F T100F A105W N120T",5
"lib1","SARS-CoV-2","AAGAACTTATCCACAA",3,46.94,10.67,-0.09,0.06,2.88,1.06,0,">1 nonsynonymous","S43F N58E S129A",3
"lib1","SARS-CoV-2","AAGAACTTATTATTCT",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P T55H F70L G101S G116S E141D",6
"lib1","SARS-CoV-2","AAGAACTTCAGCCAGT",3,42.37,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3M Y91S F99Y V103Y R136C",5
"lib1","SARS-CoV-2","AAGAACTTCATGATGA",6,77.59,8.45,-2.31,0.1,2.3,1.11,0,">1 nonsynonymous","N130G Q144K G174C",3
"lib1","SARS-CoV-2","AAGAACTTCCAGTTAT",4,63.59,10.23,-0.53,0.08,2.74,1.07,0,">1 nonsynonymous","G9T V37N G152C",3
"lib1","SARS-CoV-2","AAGAAGAAAACTAGAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","N1R A33S L122G S164M Y175*",5
"lib1","SARS-CoV-2","AAGAAGAAAATATCAA",2,46.64,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","AAGAAGAAATATATCA",1,26.99,10.38,-0.38,0.09,2.94,1,0,">1 nonsynonymous","E186S H189Y",2
"lib1","SARS-CoV-2","AAGAAGAAGCATAGGG",3,23.24,10.27,-0.49,0.19,2.17,1.03,0.02,">1 nonsynonymous","G83V Q144G",2
"lib1","SARS-CoV-2","AAGAAGAAGCCGTCCA",2,12.71,8.81,-1.95,0.17,1.94,1.3,0.01,">1 nonsynonymous","N24R W106A N110R G166S",4
"lib1","SARS-CoV-2","AAGAAGAAGCTAACCG",11,89.56,10.25,-0.52,0.03,2.9,1.01,0,"1 nonsynonymous","Y35Q",1
"lib1","SARS-CoV-2","AAGAAGAATACCGTAC",1,8.57,10.97,0.2,0.14,2.98,1,0,">1 nonsynonymous","I2L T55Y",2
"lib1","SARS-CoV-2","AAGAAGAATCAGTTAA",3,53.32,10.7,-0.06,0.1,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAGAATCATAACC",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E F156P",2
"lib1","SARS-CoV-2","AAGAAGACGAATCCCA",3,2.45,NA,NA,NA,NA,NA,NA,"stop","N40* F99I",2
"lib1","SARS-CoV-2","AAGAAGACTCCGTCTT",6,67.16,6.23,-4.54,0.52,1.5,1.17,0.01,"1 nonsynonymous","Y93K",1
"lib1","SARS-CoV-2","AAGAAGAGCACACGTG",2,46.65,10.76,-0.01,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGAAGAGCGGAACCC",5,18.7,6.96,-3.8,0.44,1.5,1.14,0.04,">1 nonsynonymous","N64Y G86F",2
"lib1","SARS-CoV-2","AAGAAGAGGAAAAAAT",5,46.14,10,-0.77,0.07,2.75,1.03,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","AAGAAGAGGAAATGAT",8,1.85,NA,NA,NA,NA,NA,NA,"stop","Y35G S53F P133N P197*",4
"lib1","SARS-CoV-2","AAGAAGATACCACCGA",1,60.86,10.5,-0.26,0.07,2.94,1.04,0,">1 nonsynonymous","N120K Q144P",2
"lib1","SARS-CoV-2","AAGAAGATATTCAGTA",1,6.72,6.85,-3.92,0.54,1.5,1.04,0.06,">1 nonsynonymous","S36T V52H S69T A89S D97L D112Q P197L",7
"lib1","SARS-CoV-2","AAGAAGATGGCAGTTA",3,4.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","AAGAAGATTAAACTTA",4,3.25,NA,NA,NA,NA,NA,NA,"stop","A22* Y35A V103S N120I G152D G166L",6
"lib1","SARS-CoV-2","AAGAAGATTCAGGACT",2,29.41,10.45,-0.32,0.06,2.88,1.02,0,">1 nonsynonymous","E10K T15L V37F",3
"lib1","SARS-CoV-2","AAGAAGATTTAAGGCT",2,5.84,NA,NA,NA,NA,NA,NA,"stop","N4Q Y39N G174* L188D T201G",5
"lib1","SARS-CoV-2","AAGAAGATTTCAAATG",5,110.71,10.2,-0.56,0.05,2.88,1,0,">1 nonsynonymous","N4G D59F K87W",3
"lib1","SARS-CoV-2","AAGAAGCAATGAAACC",1,22.68,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9Q A105N G152D Y165L",4
"lib1","SARS-CoV-2","AAGAAGCACAGAAAGC",3,49.41,10.46,-0.3,0.05,2.98,1,0,">1 nonsynonymous","K26S V115S",2
"lib1","SARS-CoV-2","AAGAAGCACTACATTT",13,247.4,10.13,-0.64,0.03,2.89,1.01,0,">1 nonsynonymous","S113G A190M",2
"lib1","SARS-CoV-2","AAGAAGCAGACAAGCT",3,20.18,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N13I P82T",2
"lib1","SARS-CoV-2","AAGAAGCATATCGATC",2,11.52,6,-4.76,2,3,1.23,0,">1 nonsynonymous","T63Y K94Q K114R P149Q Q168K K198N",6
"lib1","SARS-CoV-2","AAGAAGCATTTTGAAG",6,121.31,10.74,-0.03,0.08,2.85,1.09,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","AAGAAGCCCCAATAAA",1,67.89,8.74,-2.03,0.1,2.85,1.13,0,">1 nonsynonymous","T55C Y119W",2
"lib1","SARS-CoV-2","AAGAAGCCCTATTATT",7,5023.52,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S45L R124M P133W P149L",4
"lib1","SARS-CoV-2","AAGAAGCCGTTCCCAT",4,204.98,8.98,-1.78,0.09,2.68,1.15,0,">1 nonsynonymous","K87N G116V K132V S147V",4
"lib1","SARS-CoV-2","AAGAAGCCTGTGCGCT",1,24.17,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","S113F T170F R179M",3
"lib1","SARS-CoV-2","AAGAAGCGTATACCCG",5,107.28,10.06,-0.7,0.1,2.29,1.05,0,"1 nonsynonymous","K94G",1
"lib1","SARS-CoV-2","AAGAAGCTAAAATTAA",9,6.06,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S41V G101E",2
"lib1","SARS-CoV-2","AAGAAGCTGAACGGCC",5,61.91,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S19Q S36T N157A",3
"lib1","SARS-CoV-2","AAGAAGCTGACTAATA",1,6.19,6.92,-3.84,0.36,2.83,1.41,0.02,">1 nonsynonymous","W106L V182I A190R",3
"lib1","SARS-CoV-2","AAGAAGCTTGTATTAA",7,87.74,9.98,-0.79,0.11,2.32,1.06,0,">1 nonsynonymous","V20S T55E T201P",3
"lib1","SARS-CoV-2","AAGAAGGAAACAAAAA",3,20.03,9.77,-1,0.08,2.8,1.1,0,">1 nonsynonymous","C31L C61P",2
"lib1","SARS-CoV-2","AAGAAGGAAAGCTCTA",7,0.39,NA,NA,NA,NA,NA,NA,"stop","P7S D68W Y121*",3
"lib1","SARS-CoV-2","AAGAAGGACTTTAACA",1,47.88,10.24,-0.53,0.04,2.9,1,0,">1 nonsynonymous","C6Y P54L T201A",3
"lib1","SARS-CoV-2","AAGAAGGAGTGTGGTG",12,62.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A18I V103W Q144T",3
"lib1","SARS-CoV-2","AAGAAGGAGTTTTATA",4,9.16,9.42,-1.34,0.32,1.5,1.11,0.07,">1 nonsynonymous","S43V K48N K94F",3
"lib1","SARS-CoV-2","AAGAAGGATATTACCG",9,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V C150R",2
"lib1","SARS-CoV-2","AAGAAGGCACGATATA",1,39.22,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2L V37L V173S F185T",4
"lib1","SARS-CoV-2","AAGAAGGCGCGACTCG",12,125.26,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S29T P82Q N92R T170N",4
"lib1","SARS-CoV-2","AAGAAGGGAACAGATA",4,59.05,10.65,-0.11,0.04,2.92,1.06,0,">1 nonsynonymous","N130P V173G K198I",3
"lib1","SARS-CoV-2","AAGAAGGGAATAGTTG",7,75.27,9.76,-1.01,0.12,1.78,1.11,0.01,">1 nonsynonymous","E10K W106S",2
"lib1","SARS-CoV-2","AAGAAGGGACCAACTA",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107C P161T",2
"lib1","SARS-CoV-2","AAGAAGGGCAATTAAG",12,68.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D98Q W106V C150V G172M L188C",5
"lib1","SARS-CoV-2","AAGAAGGTACAAAGTA",9,41.93,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","Y39V D98V I104S G146C",4
"lib1","SARS-CoV-2","AAGAAGGTTAACGAGA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","R27P D68* Y91D Y121E P169Y",5
"lib1","SARS-CoV-2","AAGAAGTAACAAGGTG",5,59.92,10.61,-0.15,0.05,2.92,1.01,0,"1 nonsynonymous","T63F",1
"lib1","SARS-CoV-2","AAGAAGTAATAAAATC",10,45.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6T Y35H G51S P82A E154Y",5
"lib1","SARS-CoV-2","AAGAAGTAGGAGCATT",4,97.04,10.36,-0.4,0.04,2.9,1.05,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AAGAAGTATAATTTAG",1,13.92,10.06,-0.71,0.17,2.57,1.05,0.01,">1 nonsynonymous","D98Y N120F Y143F",3
"lib1","SARS-CoV-2","AAGAAGTATATAGATG",16,183.65,10.71,-0.06,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAAGTCCTACTATG",1,0,NA,NA,NA,NA,NA,NA,"stop","W106K P149*",2
"lib1","SARS-CoV-2","AAGAAGTCTCGAGTAA",3,75.4,10.37,-0.4,0.05,2.86,1.07,0,">1 nonsynonymous","K87L T201C",2
"lib1","SARS-CoV-2","AAGAAGTCTCTACAAT",3,45.55,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S108Y V115F K128V T201G",4
"lib1","SARS-CoV-2","AAGAAGTCTGTAATGG",5,19.43,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","A14K V71L E76A Y91L R136M S164F",6
"lib1","SARS-CoV-2","AAGAAGTGTTAAGACC",6,82.28,8.73,-2.04,0.08,2.86,1.04,0,">1 nonsynonymous","P54K Y143N K199M",3
"lib1","SARS-CoV-2","AAGAATAAAATCGGGG",6,2.3,NA,NA,NA,NA,NA,NA,"stop","F126I D137* F185T",3
"lib1","SARS-CoV-2","AAGAATAAATTTATAA",1,33.68,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19W S41E L60T K87S",4
"lib1","SARS-CoV-2","AAGAATAACCCACCTT",2,50.06,10.76,0,0.04,2.94,1.03,0,">1 nonsynonymous","V37S A89S",2
"lib1","SARS-CoV-2","AAGAATAACCGATTAG",5,52.6,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","A18L D59S G74F",3
"lib1","SARS-CoV-2","AAGAATAAGTGCCATG",5,84.79,10.11,-0.65,0.06,2.68,1.08,0,">1 nonsynonymous","W106F K128Q",2
"lib1","SARS-CoV-2","AAGAATAAGTGTAAAG",2,45.4,8.62,-2.14,0.17,1.9,1.2,0.01,">1 nonsynonymous","N1R S69M Q163T T170M",4
"lib1","SARS-CoV-2","AAGAATACATAAACCG",3,29.85,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","P161F A192E",2
"lib1","SARS-CoV-2","AAGAATACATTAAATC",2,10.67,10.67,-0.1,0.09,2.93,1.06,0,">1 nonsynonymous","L5P V37F Y91H D97I",4
"lib1","SARS-CoV-2","AAGAATACCACCACCA",4,61.91,8.6,-2.16,0.08,2.81,1.08,0,">1 nonsynonymous","Y143A T201L",2
"lib1","SARS-CoV-2","AAGAATACCACGCTGG",2,41.04,10.77,0,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAATACCCTCATTT",4,1.13,NA,NA,NA,NA,NA,NA,"stop","C49P F62P P82A F99S Y123*",5
"lib1","SARS-CoV-2","AAGAATACCGGCAAGG",9,49.06,6.28,-4.49,0.54,1.5,1.19,0.01,"1 nonsynonymous","F70K",1
"lib1","SARS-CoV-2","AAGAATACGAAATACC",5,124.78,10.18,-0.58,0.1,2.41,1,0,">1 nonsynonymous","K56V A105Y",2
"lib1","SARS-CoV-2","AAGAATACTAGCAATT",2,0.23,NA,NA,NA,NA,NA,NA,"stop","I28* F44D T170P",3
"lib1","SARS-CoV-2","AAGAATAGATTTACCG",3,110.12,9.74,-1.03,0.12,1.88,1.07,0.01,">1 nonsynonymous","V37D P96H C195H",3
"lib1","SARS-CoV-2","AAGAATAGCACATAAC",3,30.47,8.74,-2.03,0.28,1.5,1,0.04,">1 nonsynonymous","L95P K199S",2
"lib1","SARS-CoV-2","AAGAATAGCCAACGTG",1,6.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L G51V A145M",3
"lib1","SARS-CoV-2","AAGAATAGGTTTCACA",5,81.44,9.21,-1.56,0.07,2.73,1.13,0,">1 nonsynonymous","K56W Y159F L187N",3
"lib1","SARS-CoV-2","AAGAATAGTGACTCGT",3,38.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A D98S A105M G155C Q163K",5
"lib1","SARS-CoV-2","AAGAATAGTTTTTAAA",9,3.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148H",1
"lib1","SARS-CoV-2","AAGAATATAACGACCT",2,132.89,10.72,-0.04,0.07,2.93,1.05,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","AAGAATATACTCAATC",8,103.9,9.33,-1.43,0.15,1.79,1.15,0.01,">1 nonsynonymous","D90R W106I N151R",3
"lib1","SARS-CoV-2","AAGAATATCTCCAACT",2,112.27,10.42,-0.34,0.04,2.98,1,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","AAGAATATTAAAAAGT",3,61.98,10.47,-0.3,0.05,2.93,1.01,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","AAGAATATTCAAAGAA",2,42.36,10.81,0.04,0.05,2.93,1.07,0,">1 nonsynonymous","F156M Q168W",2
"lib1","SARS-CoV-2","AAGAATCAAAGTGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110A L122C",2
"lib1","SARS-CoV-2","AAGAATCAATAACTAA",5,92.95,8.77,-1.99,0.09,2.95,1.04,0,">1 nonsynonymous","K87M E141L F156S L188W",4
"lib1","SARS-CoV-2","AAGAATCAATCATACC",3,304.17,10.72,-0.05,0.07,2.91,1.05,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","AAGAATCAATCCGAGC",3,0.71,NA,NA,NA,NA,NA,NA,"stop","S43V I88* S113C N171K",4
"lib1","SARS-CoV-2","AAGAATCAATTAATAG",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I Y119V",2
"lib1","SARS-CoV-2","AAGAATCAATTAGACT",1,20.87,6.47,-4.29,0.62,1.5,1.1,0.05,">1 nonsynonymous","K26W N40A G86T A105M",4
"lib1","SARS-CoV-2","AAGAATCACCAGGGTA",11,38.76,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","C6T F99T W106G N151C",4
"lib1","SARS-CoV-2","AAGAATCACTTGTGTT",4,12.78,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","P7R D68N W106T",3
"lib1","SARS-CoV-2","AAGAATCATAACATGC",6,15.78,NA,NA,NA,NA,NA,NA,"stop","D98* V103M Y178D",3
"lib1","SARS-CoV-2","AAGAATCATAACGATC",3,132.21,10.57,-0.19,0.04,2.94,1.01,0,">1 nonsynonymous","I2D P54S G83C",3
"lib1","SARS-CoV-2","AAGAATCCAATCCCGG",2,10.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35E S53Q P82R G146A",4
"lib1","SARS-CoV-2","AAGAATCCTCACCATT",1,93.58,10.79,0.03,0.06,2.92,1.04,0,">1 nonsynonymous","T3N V11I",2
"lib1","SARS-CoV-2","AAGAATCGCAGCCTGT",4,22.28,8.3,-2.46,0.26,1.9,1.15,0.03,">1 nonsynonymous","E10W T55N Y119H P191Y",4
"lib1","SARS-CoV-2","AAGAATCGCATCATCG",13,59.79,6.35,-4.42,0.99,1.5,1.3,0.05,">1 nonsynonymous","N1E G51P A89N",3
"lib1","SARS-CoV-2","AAGAATCGGTAGCAAT",5,165.79,10.02,-0.75,0.07,2.33,1.04,0,">1 nonsynonymous","P7I T140C",2
"lib1","SARS-CoV-2","AAGAATCGTAAAATTG",2,0.9,NA,NA,NA,NA,NA,NA,"stop","P82H D98W N130*",3
"lib1","SARS-CoV-2","AAGAATCGTTTCAAAG",2,8.37,10.05,-0.72,0.25,2.05,1,0.04,">1 nonsynonymous","A14R V65Y",2
"lib1","SARS-CoV-2","AAGAATCTCATAAGAA",3,80.41,10.13,-0.64,0.08,2.79,1.02,0,">1 nonsynonymous","K87Y S129P G152H",3
"lib1","SARS-CoV-2","AAGAATCTCTTGCACT",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A42I C61E L95S T100A K128V E135M E141T K199E",9
"lib1","SARS-CoV-2","AAGAATCTTTGCATTT",2,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAGAATGAAAACAGCT",8,118.64,10.53,-0.24,0.05,2.85,1.05,0,">1 nonsynonymous","G9N N13R",2
"lib1","SARS-CoV-2","AAGAATGAAGAAACTA",6,79.59,10.39,-0.37,0.03,2.89,1,0,"1 nonsynonymous","G9C",1
"lib1","SARS-CoV-2","AAGAATGAAGTTATTT",1,28.43,9.86,-0.9,0.14,2.48,1.07,0.01,">1 nonsynonymous","G9P G155V",2
"lib1","SARS-CoV-2","AAGAATGACAGACGCG",1,6.54,10.67,-0.1,0.07,3,1.01,0,">1 nonsynonymous","N4F T46I P197A",3
"lib1","SARS-CoV-2","AAGAATGAGAAAACCG",2,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K S41V V103W",3
"lib1","SARS-CoV-2","AAGAATGAGAAGTAGG",2,29.01,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","P82A N157R Q163A",3
"lib1","SARS-CoV-2","AAGAATGAGGGCACAA",1,21.51,8.95,-1.81,0.13,1.9,1.05,0.01,">1 nonsynonymous","S45M G146W",2
"lib1","SARS-CoV-2","AAGAATGATGACAGAC",1,14.11,10.7,-0.07,0.04,2.9,1.09,0,">1 nonsynonymous","F62T A192M",2
"lib1","SARS-CoV-2","AAGAATGCCCAACACA",3,35.75,7.32,-3.44,0.3,1.5,1.15,0.03,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","AAGAATGCCGCCTACC",9,58.17,6.51,-4.26,0.57,1.5,1.25,0.03,">1 nonsynonymous","D68E T100G F134H",3
"lib1","SARS-CoV-2","AAGAATGCCGTCTAAA",5,0.23,NA,NA,NA,NA,NA,NA,"stop","L38I F44C D97K T140R L162*",5
"lib1","SARS-CoV-2","AAGAATGCCTTCCCCG",2,0.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","AAGAATGCTAGGTGTC",1,5.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44I F99D F185G",3
"lib1","SARS-CoV-2","AAGAATGGCTACACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F70T S200*",2
"lib1","SARS-CoV-2","AAGAATGTACAATCAA",2,54.45,10.67,-0.09,0.04,2.91,1.03,0,">1 nonsynonymous","N1Y N58H L122Y",3
"lib1","SARS-CoV-2","AAGAATGTACAGGTAG",2,7.7,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3M R27A D137L",3
"lib1","SARS-CoV-2","AAGAATGTACCCCAAT",10,46.41,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12Y E76N P161T G174L",4
"lib1","SARS-CoV-2","AAGAATGTCACGGAGG",6,64.14,9.01,-1.75,0.13,1.5,1.07,0.01,">1 nonsynonymous","W23Y A81R D90T",3
"lib1","SARS-CoV-2","AAGAATGTGATTTAAG",3,7.7,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C31A Y119V L183E",3
"lib1","SARS-CoV-2","AAGAATGTGCTTCCAT",1,0.6,NA,NA,NA,NA,NA,NA,"stop","G9* K56L P82T T170D",4
"lib1","SARS-CoV-2","AAGAATTACGGCAAAT",2,31.67,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","K26P K94Q Y121M C150M",4
"lib1","SARS-CoV-2","AAGAATTACTATGAAT",5,11.79,6,-4.76,2,3,1.07,0,">1 nonsynonymous","K56M A81V P96Y C158F",4
"lib1","SARS-CoV-2","AAGAATTAGTATGATA",1,11.88,7.09,-3.67,0.55,2.33,1.13,0.01,">1 nonsynonymous","Y35H S41L Q176S",3
"lib1","SARS-CoV-2","AAGAATTATGACCCGG",4,47.86,10.69,-0.07,0.05,2.9,1.03,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","AAGAATTATGAGACCT",1,47.51,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P54S G86I N118Y R179Q",4
"lib1","SARS-CoV-2","AAGAATTATTTAACGA",2,10.67,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11C F99S V103G K114I P169C L183M",6
"lib1","SARS-CoV-2","AAGAATTCCTTCGATA",1,96.16,10.59,-0.18,0.05,2.91,1.04,0,">1 nonsynonymous","T100V K132P",2
"lib1","SARS-CoV-2","AAGAATTCGCATGAAA",4,61.17,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40C F126S C150K",3
"lib1","SARS-CoV-2","AAGAATTCGTTTACTT",10,107.92,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C6M L60P F134V G155S K198S",5
"lib1","SARS-CoV-2","AAGAATTGAATCCCAC",3,42.77,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","T3C G83V G146P G152N",4
"lib1","SARS-CoV-2","AAGAATTGCACAACCA",2,25.61,6,-4.76,1.03,1.5,1.14,0.01,">1 nonsynonymous","N1E I104L C150Y T201C",4
"lib1","SARS-CoV-2","AAGAATTTATTATGGA",2,25.2,9.64,-1.12,0.06,2.78,1.15,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","AAGAATTTCATTTACT",1,53.13,10.47,-0.3,0.07,2.87,1.06,0,">1 nonsynonymous","G9E E186V",2
"lib1","SARS-CoV-2","AAGAATTTGAGGACCT",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T W106G N110R R127P",4
"lib1","SARS-CoV-2","AAGAATTTTCTTCCAG",10,1.57,NA,NA,NA,NA,NA,NA,"stop","A18T F62S F70* G116M",4
"lib1","SARS-CoV-2","AAGAATTTTTTAACGA",1,22.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34G L60R S113T",3
"lib1","SARS-CoV-2","AAGACAAAAACCTTAA",7,31.15,8.44,-2.33,0.17,1.65,1.15,0.01,">1 nonsynonymous","F12N T170S",2
"lib1","SARS-CoV-2","AAGACAAAACTTAACA",10,2.35,NA,NA,NA,NA,NA,NA,"stop","V11Y P149H L188*",3
"lib1","SARS-CoV-2","AAGACAAAAGTCAATC",7,76.98,9.89,-0.87,0.09,2.03,1.11,0,">1 nonsynonymous","D59S W106V",2
"lib1","SARS-CoV-2","AAGACAAAGATAGTCA",3,15.44,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G86P K94F F99I A105R",4
"lib1","SARS-CoV-2","AAGACAAATACTAGTG",1,7.01,9.71,-1.06,0.13,2.06,1.12,0.01,">1 nonsynonymous","K56C P133N K199I",3
"lib1","SARS-CoV-2","AAGACAAATTCAATTT",3,40.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F17P V32R G51D V77E G83V I104R V173G",7
"lib1","SARS-CoV-2","AAGACAACAACGACCT",2,58.9,7.83,-2.93,0.3,1.5,1.02,0.03,">1 nonsynonymous","T3V G86D T140N",3
"lib1","SARS-CoV-2","AAGACAACCCTTTCCA",3,74.42,8.7,-2.07,0.09,2.79,1.12,0,">1 nonsynonymous","N4V G146K",2
"lib1","SARS-CoV-2","AAGACAACCTGTATAA",2,12.18,10.67,-0.09,0.09,2.92,1.06,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","AAGACAACGCCCCACC",2,19.7,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N92Q F99L K199S",3
"lib1","SARS-CoV-2","AAGACAACGTTTCCGA",1,68.87,6,-4.76,1.22,1.5,1.12,0.01,">1 nonsynonymous","N40V F44T L60Q Y91H A105S Y121R",6
"lib1","SARS-CoV-2","AAGACAACTAGATATC",3,20.58,6,-4.76,1.39,1.5,1.15,0.02,">1 nonsynonymous","L57A P96R Q168E",3
"lib1","SARS-CoV-2","AAGACAAGCTAATTAC",7,0.73,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","AAGACAAGTTGAACAG",3,25.02,10.48,-0.28,0.11,2.97,1,0,">1 nonsynonymous","V32T V65G",2
"lib1","SARS-CoV-2","AAGACAATAAACTACA",3,18.96,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V37H T55V D112V E135G L162V",5
"lib1","SARS-CoV-2","AAGACAATAAGTTAAT",18,294.88,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D112E Y165L",2
"lib1","SARS-CoV-2","AAGACAATACTCAGAA",3,33.46,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N120V G146N Q176T",3
"lib1","SARS-CoV-2","AAGACAATCAGATACA",3,47.66,10.44,-0.32,0.05,2.91,1.05,0,">1 nonsynonymous","T3G E154N",2
"lib1","SARS-CoV-2","AAGACAATCTTCCAAA",4,79.4,10.48,-0.29,0.03,2.94,1.01,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","AAGACAATGATAGGTA",7,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G G101T K128Y R179A",4
"lib1","SARS-CoV-2","AAGACAATGCCTCACA",4,58.64,9.16,-1.61,0.16,1.5,1.04,0.01,">1 nonsynonymous","G9L A105C A190V K198V",4
"lib1","SARS-CoV-2","AAGACAATTCAGTGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y N130A D137R C158L",4
"lib1","SARS-CoV-2","AAGACAATTTAGAAAA",2,22.78,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","N1D S41T C49P Y123M L131S T201Q",6
"lib1","SARS-CoV-2","AAGACACACTGCTTCC",6,41.91,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","E10G R127D E135I G152R",4
"lib1","SARS-CoV-2","AAGACACAGTTTTCGC",4,49.78,10.47,-0.3,0.05,2.94,1,0,">1 nonsynonymous","P7Q D90L",2
"lib1","SARS-CoV-2","AAGACACATATATTGC",2,68.34,9.48,-1.28,0.1,2.79,1.11,0,">1 nonsynonymous","D97L I142M N157D",3
"lib1","SARS-CoV-2","AAGACACATCATATCC",12,31.2,7.38,-3.39,0.29,1.5,1.12,0.03,">1 nonsynonymous","T15R N40I G146Y",3
"lib1","SARS-CoV-2","AAGACACATGTAACCG",3,94.79,8.26,-2.51,0.34,1.5,1,0.04,">1 nonsynonymous","D90W R179H",2
"lib1","SARS-CoV-2","AAGACACCTTATTGCT",5,0.28,NA,NA,NA,NA,NA,NA,"stop","V52R I88F G116* S129K N157C",5
"lib1","SARS-CoV-2","AAGACACGCAGGCAGT",2,11.42,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","L57C V71K P161R",3
"lib1","SARS-CoV-2","AAGACACGGCTACCTA",2,10.08,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","V20K Y91F N107L",3
"lib1","SARS-CoV-2","AAGACACGTATTAGCT",7,188.75,10.71,-0.05,0.07,2.84,1.09,0,"1 nonsynonymous","N4R",1
"lib1","SARS-CoV-2","AAGACACTAACAGGCC",3,1.29,NA,NA,NA,NA,NA,NA,"stop","L5G K87M Y93F T148R G172E T201*",6
"lib1","SARS-CoV-2","AAGACACTCAAATAGT",2,31.39,6.63,-4.14,0.47,1.5,1.13,0.03,">1 nonsynonymous","D90M C158V",2
"lib1","SARS-CoV-2","AAGACACTCCCACGAT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","N40M G51A A89K C158V Q176*",5
"lib1","SARS-CoV-2","AAGACAGAAAAATCCT",9,51.06,10.67,-0.09,0.06,2.92,1.05,0,">1 nonsynonymous","A14G A22S T63S L122K",4
"lib1","SARS-CoV-2","AAGACAGAACGATAGT",5,55.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L P96H V103L G152C K199E",5
"lib1","SARS-CoV-2","AAGACAGACATGCTTA",3,90.59,8.93,-1.83,0.09,2.75,1.17,0,">1 nonsynonymous","N24G F156D",2
"lib1","SARS-CoV-2","AAGACAGACTCTACAA",7,102.47,10.66,-0.11,0.05,2.89,1.06,0,">1 nonsynonymous","A42R V115M",2
"lib1","SARS-CoV-2","AAGACAGAGACTAAGA",2,24.3,10.46,-0.31,0.09,2.91,1.06,0,">1 nonsynonymous","L5T R78C",2
"lib1","SARS-CoV-2","AAGACAGATCCTATTA",2,54.31,10.66,-0.1,0.09,2.9,1,0,">1 nonsynonymous","S41Y Q84C",2
"lib1","SARS-CoV-2","AAGACAGATGAAGAAT",3,34.1,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","G117V V182D A190V T201E",4
"lib1","SARS-CoV-2","AAGACAGATGAGGGAA",1,21.64,10.79,0.02,0.06,3,1.01,0,">1 nonsynonymous","V37S K128P",2
"lib1","SARS-CoV-2","AAGACAGATTTAAAAA",3,36.72,9.5,-1.26,0.1,2.75,1.1,0,">1 nonsynonymous","Y119S N151S",2
"lib1","SARS-CoV-2","AAGACAGCTTTAACCA",8,3.39,NA,NA,NA,NA,NA,NA,"stop","F62N Q84* V103R",3
"lib1","SARS-CoV-2","AAGACAGGAAATCTAA",3,42.37,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D59Q N107L V180F",3
"lib1","SARS-CoV-2","AAGACAGGAACTGTAA",5,182.08,10.02,-0.74,0.06,2.61,1,0,">1 nonsynonymous","S45L V115R",2
"lib1","SARS-CoV-2","AAGACAGGACAGTCTT",1,28.19,10.84,0.08,0.05,2.94,1.05,0,">1 nonsynonymous","K56A L187S",2
"lib1","SARS-CoV-2","AAGACAGGATAGTGAA",2,22.22,9.46,-1.3,0.15,1.97,1.1,0.01,"1 nonsynonymous","F12Q",1
"lib1","SARS-CoV-2","AAGACAGGCAACTTAA",7,154.95,8.72,-2.05,0.12,2.85,1.13,0.01,"1 nonsynonymous","L125E",1
"lib1","SARS-CoV-2","AAGACAGGCCAAAAAA",10,4.36,NA,NA,NA,NA,NA,NA,"stop","K56L K87D L122P N157Q Y165* T201*",6
"lib1","SARS-CoV-2","AAGACAGTAGAAAAAG",5,62.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V32K K56C A67L V103G",4
"lib1","SARS-CoV-2","AAGACAGTGAAGATAC",5,37.75,10.36,-0.41,0.07,2.87,1.11,0,">1 nonsynonymous","C61Q S129F G152S",3
"lib1","SARS-CoV-2","AAGACAGTTGACATTT",4,22.64,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","G51C V103L S139R E154F P161W",5
"lib1","SARS-CoV-2","AAGACAGTTGCCTGTT",2,20.54,10.02,-0.75,0.2,2.17,1.19,0.01,">1 nonsynonymous","A22E N30V A190D",3
"lib1","SARS-CoV-2","AAGACAGTTTATCTTG",2,0.34,NA,NA,NA,NA,NA,NA,"stop","G9L G51V N64* R78H",4
"lib1","SARS-CoV-2","AAGACATAAATTTATT",3,53.32,10.72,-0.04,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACATACCAGATTC",3,2.13,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib1","SARS-CoV-2","AAGACATAGTACCCAC",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y K94E",2
"lib1","SARS-CoV-2","AAGACATATACACACG",2,37.7,10.86,0.09,0.1,2.93,1.04,0,"1 nonsynonymous","S43I",1
"lib1","SARS-CoV-2","AAGACATCAAAAACTT",2,12.65,6.08,-4.68,0.55,1.5,1.12,0.01,">1 nonsynonymous","F8M Y121C P177V",3
"lib1","SARS-CoV-2","AAGACATCGTAGTACT",11,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28Y E135C",2
"lib1","SARS-CoV-2","AAGACATCTCGATGAC",3,27,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N1K S69G F134N R179G",4
"lib1","SARS-CoV-2","AAGACATGATTATTGT",2,35.9,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15G V37M T55A Y159R",4
"lib1","SARS-CoV-2","AAGACATGGAAAACTT",6,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y A22T K56S I88M S113N",5
"lib1","SARS-CoV-2","AAGACATGGTTTATGT",6,64.34,10.15,-0.61,0.06,2.8,1.04,0,"1 nonsynonymous","Y66R",1
"lib1","SARS-CoV-2","AAGACATTAACCCATA",3,115.72,10.06,-0.7,0.1,2.61,1.07,0,">1 nonsynonymous","T3D G51N K114I L162M",4
"lib1","SARS-CoV-2","AAGACATTTAAATTCG",10,61.17,9.21,-1.55,0.13,1.96,1.1,0.01,">1 nonsynonymous","A67L P96T Q144T",3
"lib1","SARS-CoV-2","AAGACATTTGGCTTAC",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T S36G K56P W106H",4
"lib1","SARS-CoV-2","AAGACCAAATCATAGC",2,48.79,9.23,-1.53,0.25,1.59,1.15,0.02,">1 nonsynonymous","S43A Y50L",2
"lib1","SARS-CoV-2","AAGACCAAATTAACGG",6,0.92,NA,NA,NA,NA,NA,NA,"stop","F47W G172A T201*",3
"lib1","SARS-CoV-2","AAGACCAAGAAGTCAA",8,0.54,NA,NA,NA,NA,NA,NA,"stop","V65* T170L",2
"lib1","SARS-CoV-2","AAGACCAATTCCCACC",5,3.66,NA,NA,NA,NA,NA,NA,"stop","R16M G83W W106S K128*",4
"lib1","SARS-CoV-2","AAGACCACAGCACGCC",1,61.73,10.45,-0.31,0.05,2.89,1.03,0,"1 nonsynonymous","V181I",1
"lib1","SARS-CoV-2","AAGACCACGGCGCACG",9,92.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K48R L57W Q79R A105Q Y121C K132P",6
"lib1","SARS-CoV-2","AAGACCAGACTGATTT",3,53.02,10.39,-0.38,0.05,2.88,1.03,0,">1 nonsynonymous","T46E S184C S200G",3
"lib1","SARS-CoV-2","AAGACCATAAACTTTT",1,265.11,10.47,-0.29,0.04,2.93,1,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","AAGACCATGAAATTAT",2,27.47,10.62,-0.14,0.09,2.89,1,0,">1 nonsynonymous","I2A A22G A42G",3
"lib1","SARS-CoV-2","AAGACCATGCGGCGAT",3,94.32,10.74,-0.02,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACCATTTATATTC",3,36.24,10.27,-0.49,0.1,2.75,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACCCAAAGTGTGG",3,9.99,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L5R Y50N V77D S113R Y121L",5
"lib1","SARS-CoV-2","AAGACCCAAGTGAGGT",3,1396.66,10.27,-0.5,0.03,2.84,1,0,">1 nonsynonymous","T46L D98F",2
"lib1","SARS-CoV-2","AAGACCCACTGGTTAA",3,1.8,NA,NA,NA,NA,NA,NA,"stop","G51P N58Q K94Y L162*",4
"lib1","SARS-CoV-2","AAGACCCAGAATGTGA",2,51.58,10.68,-0.09,0.06,2.96,1.02,0,"1 nonsynonymous","T46I",1
"lib1","SARS-CoV-2","AAGACCCAGGGTAGAT",5,105.75,10.83,0.06,0.07,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGACCCCCAGTATCC",3,81.78,10.27,-0.5,0.09,2.45,1,0,">1 nonsynonymous","G51L K56S",2
"lib1","SARS-CoV-2","AAGACCCGAGAAGAAA",3,48.78,10.74,-0.02,0.11,2.88,1.07,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","AAGACCCGTAACGTTC",1,20.18,6,-4.76,2,3,1.08,0,">1 nonsynonymous","R27L D68N A105T S184L",4
"lib1","SARS-CoV-2","AAGACCCGTACAGTTA",6,93.56,10.74,-0.02,0.03,2.92,1.03,0,">1 nonsynonymous","G9T K128D F160R",3
"lib1","SARS-CoV-2","AAGACCCTAATTCACA",2,23.83,9.54,-1.22,0.13,2.81,1.05,0.01,">1 nonsynonymous","Y91F T170E",2
"lib1","SARS-CoV-2","AAGACCCTGCTCCACA",1,12.29,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L95M F99N",2
"lib1","SARS-CoV-2","AAGACCCTTCATTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D68* G117R",2
"lib1","SARS-CoV-2","AAGACCGAAAAAGCCT",5,48.83,10.64,-0.13,0.07,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACCGACCAAAAAA",2,14.74,6,-4.76,2,3,1.08,0,">1 nonsynonymous","K87H V182W",2
"lib1","SARS-CoV-2","AAGACCGAGATCTGAG",6,13.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88R D90Y A190C",3
"lib1","SARS-CoV-2","AAGACCGATGATGACT",3,21.71,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","R27K S53V I88T D137L",4
"lib1","SARS-CoV-2","AAGACCGCACACCAGG",1,22.25,10.55,-0.21,0.07,2.93,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGACCGGGTAATTAG",1,37.54,10.69,-0.07,0.07,2.93,1.03,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","AAGACCTAATCTTCAG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","E10S R16W V37N S45Y Y91P F99* W106*",7
"lib1","SARS-CoV-2","AAGACCTACCCCGTTC",4,28.08,9.14,-1.62,0.13,1.7,1.21,0.01,">1 nonsynonymous","L5Y C61E Y123L Q144T E154A",5
"lib1","SARS-CoV-2","AAGACCTAGCACTGAT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N C158F",2
"lib1","SARS-CoV-2","AAGACCTAGCTAGCTG",4,4.83,NA,NA,NA,NA,NA,NA,"stop","P7G W23* R78I F126P Y159G Q176S",6
"lib1","SARS-CoV-2","AAGACCTATGGTGCTA",1,9.07,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N64M Y91R Y123G",3
"lib1","SARS-CoV-2","AAGACCTCCTACAAAT",3,33.18,10.64,-0.13,0.06,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACCTCTTGTGCAC",2,54.39,10.69,-0.08,0.07,2.9,1.07,0,"1 nonsynonymous","L122N",1
"lib1","SARS-CoV-2","AAGACCTGAATAAATC",4,93.44,10.72,-0.05,0.08,2.94,1.02,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","AAGACCTGCTCCCTAA",1,11.41,10,-0.76,0.26,2.18,1.1,0.03,">1 nonsynonymous","D34S I138Y",2
"lib1","SARS-CoV-2","AAGACCTTCCCGATAC",3,0.78,NA,NA,NA,NA,NA,NA,"stop","N64Q Y91T G101V G172* L183R S200T",6
"lib1","SARS-CoV-2","AAGACCTTGCTCGAGG",2,52.52,10.75,-0.01,0.07,2.89,1.07,0,"1 nonsynonymous","N24K",1
"lib1","SARS-CoV-2","AAGACCTTTATCGTTA",2,20.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50A V103Q R136H G196I",4
"lib1","SARS-CoV-2","AAGACCTTTTATCCTG",2,14.4,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","AAGACGAAGAGATTCC",2,69.86,9.68,-1.08,0.1,1.98,1.03,0,">1 nonsynonymous","G83T D97H E141S F160C",4
"lib1","SARS-CoV-2","AAGACGAAGATTGTAA",1,24.02,9.18,-1.58,0.07,2.83,1.13,0,">1 nonsynonymous","C61P Y119N",2
"lib1","SARS-CoV-2","AAGACGAAGTGAAGAT",3,13.91,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V65K G86V",2
"lib1","SARS-CoV-2","AAGACGAATAGATAGA",1,32.6,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","W23M C61S N130F G155H K199N",5
"lib1","SARS-CoV-2","AAGACGACAATCAACA",2,41.5,9.81,-0.96,0.07,1.97,1.12,0,">1 nonsynonymous","N40K E76Y",2
"lib1","SARS-CoV-2","AAGACGACCCTCATTA",14,231.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V103N N120G C150T T201L",4
"lib1","SARS-CoV-2","AAGACGAGTATTTGAA",1,44.58,8.8,-1.96,0.19,1.88,1.22,0.01,">1 nonsynonymous","A14P Y119S G166V",3
"lib1","SARS-CoV-2","AAGACGATAATATTTG",9,80.53,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P54T S69Q V77E",3
"lib1","SARS-CoV-2","AAGACGATAATTGTTC",5,15.5,9.89,-0.87,0.19,1.9,1.05,0.01,">1 nonsynonymous","G86N E141D",2
"lib1","SARS-CoV-2","AAGACGATCATACTTT",5,37.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F17V Y35V P54R D59Y A105T T170Y",6
"lib1","SARS-CoV-2","AAGACGATGGGTAACC",1,0.4,NA,NA,NA,NA,NA,NA,"stop","Y35D L38Q K94*",3
"lib1","SARS-CoV-2","AAGACGATTTAACTTA",1,0.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112K",1
"lib1","SARS-CoV-2","AAGACGCATTATCATA",7,59.49,10.23,-0.54,0.04,2.84,1,0,">1 nonsynonymous","F8M T46E N171H",3
"lib1","SARS-CoV-2","AAGACGCCGACATGTA",4,6.47,8.54,-2.22,0.43,1.5,1,0.08,">1 nonsynonymous","D34T L95S V103L E141G A190I T201P",6
"lib1","SARS-CoV-2","AAGACGCGGCCAAAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F99D Y143* P149S G155V N171E P177L",6
"lib1","SARS-CoV-2","AAGACGCGGTCTACAG",8,37.61,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Q144S R179L",2
"lib1","SARS-CoV-2","AAGACGCTAATATAAA",8,61.88,9.71,-1.05,0.07,2.61,1.04,0,">1 nonsynonymous","Y121S S129V",2
"lib1","SARS-CoV-2","AAGACGGAAACTTATG",7,41.04,6.68,-4.08,0.5,1.5,1.28,0.04,">1 nonsynonymous","E10G V71M R136Q",3
"lib1","SARS-CoV-2","AAGACGGAAAGACAAT",10,194.15,8.72,-2.05,0.09,2.58,1.1,0,">1 nonsynonymous","N4S D97G E141K G166I",4
"lib1","SARS-CoV-2","AAGACGGAACCAGTCA",2,29.81,6,-4.76,2,1.83,1.12,0,">1 nonsynonymous","F167N K198D",2
"lib1","SARS-CoV-2","AAGACGGATAAATTAA",6,35.37,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","F17Q V115G P133M",3
"lib1","SARS-CoV-2","AAGACGGCCCCCTATA",1,27.36,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9D F99A R127C G196V T201K",5
"lib1","SARS-CoV-2","AAGACGGCTGGAACAT",3,44.92,8.56,-2.21,0.18,2.78,1.07,0.01,">1 nonsynonymous","K87N P96G Y119M",3
"lib1","SARS-CoV-2","AAGACGGTTAAAAATA",3,93.54,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39N R78A L131P S139M S184G",5
"lib1","SARS-CoV-2","AAGACGGTTGAAATAC",8,16.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57A Y91R D97Y V103T Y119L S139C",6
"lib1","SARS-CoV-2","AAGACGTAAACGGAAT",3,45.14,10.46,-0.3,0.06,2.96,1,0,">1 nonsynonymous","V103I G196I",2
"lib1","SARS-CoV-2","AAGACGTATTACTCGT",8,137.83,10.23,-0.53,0.05,2.86,1.04,0,">1 nonsynonymous","C6D D59K",2
"lib1","SARS-CoV-2","AAGACGTCAACAAGGA",4,40.15,6,-4.76,2,3,1.27,0,">1 nonsynonymous","C49R Y165E",2
"lib1","SARS-CoV-2","AAGACGTTCAGCCCTG",6,2.32,NA,NA,NA,NA,NA,NA,"stop","A33* A42L R78I D112S N120A",5
"lib1","SARS-CoV-2","AAGACTAAACTACGAC",5,84.68,9.87,-0.9,0.06,2.63,1.03,0,">1 nonsynonymous","Y123A Q144S F160W",3
"lib1","SARS-CoV-2","AAGACTAAATCTTGCC",4,30.37,10.65,-0.12,0.05,2.93,1.03,0,">1 nonsynonymous","F8Y K56G",2
"lib1","SARS-CoV-2","AAGACTAACGACCCTT",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L Y50R K56M P133L Y159Q G174V",6
"lib1","SARS-CoV-2","AAGACTAACGACTCAA",3,52.14,10.79,0.02,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGACTACACAAGCCC",1,16.98,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","G101Y",1
"lib1","SARS-CoV-2","AAGACTACACGCTACG",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G C102S",2
"lib1","SARS-CoV-2","AAGACTACCCCAAGAA",6,62.24,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C49W G172R",2
"lib1","SARS-CoV-2","AAGACTACGCTAAAGA",3,36.27,9.35,-1.41,0.1,2.79,1.19,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","AAGACTAGAATTTCGA",3,21.5,6.39,-4.38,0.27,3,1.12,0.01,">1 nonsynonymous","A89L G152H Q168S",3
"lib1","SARS-CoV-2","AAGACTAGACTAAATT",4,10.54,NA,NA,NA,NA,NA,NA,"stop","F62V K114V Y121L I142* F156L S184P",6
"lib1","SARS-CoV-2","AAGACTAGCTGTAAAT",15,161.41,10.14,-0.63,0.07,2.47,1.03,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","AAGACTAGGAAAAAAA",6,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L L125H S147D L183A",4
"lib1","SARS-CoV-2","AAGACTAGTTTTGTTT",4,31.89,10.34,-0.43,0.05,3,1,0,">1 nonsynonymous","F44I C61L T100F",3
"lib1","SARS-CoV-2","AAGACTATAACAGCGT",4,50.29,10.74,-0.02,0.09,2.95,1.04,0,">1 nonsynonymous","E10D K114A K198N",3
"lib1","SARS-CoV-2","AAGACTATAAGGGAGA",6,140.24,10.75,-0.01,0.05,2.93,1.05,0,"1 nonsynonymous","R27T",1
"lib1","SARS-CoV-2","AAGACTATGTTTAAAG",4,13.35,8.4,-2.36,0.31,1.5,1,0.03,"1 nonsynonymous","A89D",1
"lib1","SARS-CoV-2","AAGACTATTAATACGT",3,25.02,10.47,-0.3,0.07,2.74,1,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","AAGACTCAACACCGTG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","G9* C150R",2
"lib1","SARS-CoV-2","AAGACTCTACACACAT",5,67.46,8.62,-2.14,0.14,2.73,1.13,0.01,">1 nonsynonymous","L60K S113N",2
"lib1","SARS-CoV-2","AAGACTCTTCGCATCT",7,4.24,NA,NA,NA,NA,NA,NA,"stop","A14G Y35* V103H D112A N151A Y165I",6
"lib1","SARS-CoV-2","AAGACTGACCGTGAAT",3,69.95,9.19,-1.57,0.15,2.11,1.13,0.01,">1 nonsynonymous","T55R C102V F156L",3
"lib1","SARS-CoV-2","AAGACTGAGTAGAAAC",4,181.01,10.39,-0.37,0.05,2.88,1.06,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","AAGACTGCAAAAGTTG",5,79.18,10.75,-0.01,0.07,2.91,1.03,0,"1 nonsynonymous","G152D",1
"lib1","SARS-CoV-2","AAGACTGGTGTACGTA",1,28.55,6.01,-4.76,0.73,1.5,1.14,0.01,">1 nonsynonymous","G51R V71E K94S N107D S129D",5
"lib1","SARS-CoV-2","AAGACTGTCAGGATAG",2,8.39,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y39L K94A P96S R127D",4
"lib1","SARS-CoV-2","AAGACTGTTACGAGAC",4,17.76,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","T3P N92Y N107L",3
"lib1","SARS-CoV-2","AAGACTTAAAATACGT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A14I P54* Y66L A89L",4
"lib1","SARS-CoV-2","AAGACTTAAATATTAG",7,44.76,10.39,-0.37,0.07,2.93,1.03,0,">1 nonsynonymous","I2R K87A T100M",3
"lib1","SARS-CoV-2","AAGACTTAAATGGGAG",2,27.22,10.51,-0.25,0.17,2.56,1.05,0.01,">1 nonsynonymous","D97R N171A L188H",3
"lib1","SARS-CoV-2","AAGACTTAGGGGCCAA",5,154.99,8.49,-2.28,0.24,1.5,1.06,0.03,">1 nonsynonymous","Q84P T148L G196Q T201E",4
"lib1","SARS-CoV-2","AAGACTTATTCAGAAT",3,79.03,10.43,-0.33,0.06,2.86,1.05,0,"1 nonsynonymous","N13K",1
"lib1","SARS-CoV-2","AAGACTTATTCCAAGC",4,79.46,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5M C31T D68A Y119M",4
"lib1","SARS-CoV-2","AAGACTTCAGCACACC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R D34H V71* Y93P N120Y",5
"lib1","SARS-CoV-2","AAGACTTCCCATGTAA",1,2.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","AAGACTTGTCCTTAGG",1,15.92,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","A33R F99L V103S C150F",4
"lib1","SARS-CoV-2","AAGACTTTGGAACTTT",13,69.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A C102L",2
"lib1","SARS-CoV-2","AAGACTTTGTAGAGCT",2,17.92,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","S36F Y123R C150R N157L K199H",5
"lib1","SARS-CoV-2","AAGACTTTTCGTTAAA",2,7.54,10.53,-0.23,0.17,2.92,1.04,0.01,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","AAGAGAAAACTTCGAA",1,35.94,8.73,-2.04,0.19,1.77,1.08,0.02,"1 nonsynonymous","R127D",1
"lib1","SARS-CoV-2","AAGAGAAACGGCCGGC",4,11.17,10.66,-0.11,0.08,2.89,1.05,0,"1 nonsynonymous","N120F",1
"lib1","SARS-CoV-2","AAGAGAAAGACTTACC",4,86.58,6.08,-4.68,0.96,1.5,1.17,0.02,">1 nonsynonymous","V37H S43F A67N T100A I138T",5
"lib1","SARS-CoV-2","AAGAGAACACAAATTG",5,2.5,NA,NA,NA,NA,NA,NA,"stop","G9F Y21V P82M F99* E141N R179Y",6
"lib1","SARS-CoV-2","AAGAGAAGAACTAAAA",5,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102L N120Y P133L Q168M",4
"lib1","SARS-CoV-2","AAGAGAAGCCGGTAAC",4,40.67,10.46,-0.3,0.08,2.86,1,0,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","AAGAGAATAATTAGAT",9,1.61,NA,NA,NA,NA,NA,NA,"stop","N1* P197T",2
"lib1","SARS-CoV-2","AAGAGAATACCTGAGA",1,403.99,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N4M A42T Y121S G172H",4
"lib1","SARS-CoV-2","AAGAGAATGGCTTCTG",7,18.95,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T15V P96T R136Q T170K",4
"lib1","SARS-CoV-2","AAGAGACATTAATAAT",2,9.62,9.76,-1.01,0.47,1.5,1.03,0.06,">1 nonsynonymous","D90H P133R",2
"lib1","SARS-CoV-2","AAGAGACCAATGCAAC",1,59,9.76,-1.01,0.13,1.88,1.06,0.01,">1 nonsynonymous","Y35V F185H",2
"lib1","SARS-CoV-2","AAGAGACCATGTCCAG",7,164.48,10.74,-0.02,0.04,2.9,1.07,0,">1 nonsynonymous","N4T K128P P197N",3
"lib1","SARS-CoV-2","AAGAGACCCCCAAACC",3,38.76,10.63,-0.13,0.06,2.94,1.01,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","AAGAGACGAACGGCCA",7,38,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","D98Y C150Y A190S",3
"lib1","SARS-CoV-2","AAGAGACGCTAATACA",3,4.04,NA,NA,NA,NA,NA,NA,"stop","E10* G83F W106Y F167I",4
"lib1","SARS-CoV-2","AAGAGACGGCTAATTT",2,9.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S69E F99C N120S P161S P197L",5
"lib1","SARS-CoV-2","AAGAGACTACAAGGAA",2,111.49,10.64,-0.12,0.05,2.88,1,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","AAGAGACTAGAATAAG",4,65.09,9.84,-0.93,0.1,2.08,1.04,0,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","AAGAGACTTATCCCCT",1,20.04,8.82,-1.94,0.18,1.8,1.14,0.02,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","AAGAGAGCCGCTGATC",2,38.7,9.96,-0.8,0.09,2.62,1.04,0,">1 nonsynonymous","E10Q D59P",2
"lib1","SARS-CoV-2","AAGAGAGGACATAGAC",12,67.04,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S45I S69G P82D A89Y",4
"lib1","SARS-CoV-2","AAGAGAGGCAAGTTTT",1,21.29,6,-4.76,2,1.5,1.2,0.08,">1 nonsynonymous","G86L F126D I138A K198V",4
"lib1","SARS-CoV-2","AAGAGAGGCCCGATAA",4,73.57,10.73,-0.03,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGAGAGTAGCGTAAA",7,23.45,7.17,-3.59,0.16,2.05,1.16,0.01,"1 nonsynonymous","C158E",1
"lib1","SARS-CoV-2","AAGAGAGTATACTTCA",3,11.75,10.13,-0.63,0.09,2.9,1,0.01,">1 nonsynonymous","T85C I142L",2
"lib1","SARS-CoV-2","AAGAGAGTCTCAGGCA",13,4.71,NA,NA,NA,NA,NA,NA,"stop","F70R K114* Y175*",3
"lib1","SARS-CoV-2","AAGAGATAACGAAAAG",7,156.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S41V V71K A89G",3
"lib1","SARS-CoV-2","AAGAGATAAGTTCCTG",4,22.52,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","S69Q D97Y A105Q",3
"lib1","SARS-CoV-2","AAGAGATACCAACAAA",4,73.23,9.82,-0.94,0.06,2.76,1,0,">1 nonsynonymous","T55N N151L G155C",3
"lib1","SARS-CoV-2","AAGAGATACCCCCTAT",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T S41L I80R D137E P149R G155L",6
"lib1","SARS-CoV-2","AAGAGATACTCATTTC",4,23.82,6,-4.76,2,3,1.24,0.01,"1 nonsynonymous","V180Y",1
"lib1","SARS-CoV-2","AAGAGATAGTTAAAAA",4,37.22,10.68,-0.08,0.12,2.7,1.11,0.01,">1 nonsynonymous","S43Y C61R",2
"lib1","SARS-CoV-2","AAGAGATCAGAGGAAC",3,39.28,10.8,0.04,0.1,2.84,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGAGATCCATTCCTA",3,47.42,10.53,-0.24,0.04,2.91,1.03,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","AAGAGATCCTGTTTTA",1,8.81,10.37,-0.39,0.07,2.95,1,0,">1 nonsynonymous","T55L F134N S147K",3
"lib1","SARS-CoV-2","AAGAGATCGCTTGCAA",2,64.39,6.1,-4.66,1.13,1.5,1.2,0.03,">1 nonsynonymous","I80M A105L Y178I",3
"lib1","SARS-CoV-2","AAGAGATTATAAAAAA",7,0.36,NA,NA,NA,NA,NA,NA,"stop","C31T Y119* K128M",3
"lib1","SARS-CoV-2","AAGAGATTGATCTACA",4,38.51,6,-4.76,1.03,1.5,1.08,0,">1 nonsynonymous","R27G T55N N107W",3
"lib1","SARS-CoV-2","AAGAGATTGCTATACC",8,100.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6Y T55N K94V D137S C150K",5
"lib1","SARS-CoV-2","AAGAGCAACTAATAAT",15,6.12,NA,NA,NA,NA,NA,NA,"stop","L5I Y50I P96* T148L",4
"lib1","SARS-CoV-2","AAGAGCAATTTAAATT",4,42.65,7.59,-3.18,0.32,1.5,1.2,0.03,">1 nonsynonymous","F17L Q84R G152L F156K",4
"lib1","SARS-CoV-2","AAGAGCACACCCGATC",2,62.71,9.6,-1.16,0.1,1.88,1.11,0,">1 nonsynonymous","S36P D90F",2
"lib1","SARS-CoV-2","AAGAGCACACCGCATA",1,6.17,6.16,-4.6,2,3,1.22,0.03,">1 nonsynonymous","G9I G101A",2
"lib1","SARS-CoV-2","AAGAGCACCTTACAAC",1,60.55,8.95,-1.81,0.23,1.51,1.19,0.02,">1 nonsynonymous","F12I N40I K128L",3
"lib1","SARS-CoV-2","AAGAGCACTACCAACG",3,22.37,8.09,-2.68,0.46,1.5,1,0.07,">1 nonsynonymous","C31Y G86P Y119L",3
"lib1","SARS-CoV-2","AAGAGCAGGTAACCTC",2,22.83,8.86,-1.91,0.42,1.5,1.14,0.07,">1 nonsynonymous","K94P A190I",2
"lib1","SARS-CoV-2","AAGAGCATGGTTGTCT",1,63.11,10.64,-0.13,0.07,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGAGCCAAGTTTAAG",3,26.44,10.25,-0.52,0.11,2.61,1,0.01,">1 nonsynonymous","F99L N171V",2
"lib1","SARS-CoV-2","AAGAGCCAATTTACTT",2,18.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21W N24S K87E F126A V173F V181N",6
"lib1","SARS-CoV-2","AAGAGCCGAAATATAA",7,56.54,8.73,-2.04,0.2,1.74,1.17,0.02,">1 nonsynonymous","G83I I104C",2
"lib1","SARS-CoV-2","AAGAGCCTAAGGCGGC",2,75.2,10.52,-0.24,0.03,2.96,1,0,">1 nonsynonymous","E10T I104L",2
"lib1","SARS-CoV-2","AAGAGCCTAGAACTTT",3,63.39,10.68,-0.08,0.09,2.91,1.07,0,">1 nonsynonymous","K56V L122V",2
"lib1","SARS-CoV-2","AAGAGCCTATAAAGTT",11,70,8.51,-2.26,0.09,2.59,1.07,0,">1 nonsynonymous","V52P Q84M Y159M S200I",4
"lib1","SARS-CoV-2","AAGAGCCTATATTTGT",3,43.84,10.71,-0.05,0.08,2.9,1.07,0,">1 nonsynonymous","Y39S T55D",2
"lib1","SARS-CoV-2","AAGAGCGAAACAGAGA",5,12.33,6.95,-3.82,0.37,1.9,1.14,0.02,">1 nonsynonymous","C6I L183P T201V",3
"lib1","SARS-CoV-2","AAGAGCGAAGCCATAA",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S R78W S139I G146V",4
"lib1","SARS-CoV-2","AAGAGCGAGTCCAGCA",7,134.21,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V11L G51H A105S V115C F126K A145S",6
"lib1","SARS-CoV-2","AAGAGCGCATTATGAC",2,29.43,7.18,-3.58,0.25,1.5,1.06,0.02,">1 nonsynonymous","Y35I T100R Q176F",3
"lib1","SARS-CoV-2","AAGAGCGGATAAAACT",3,75.87,9.97,-0.79,0.09,2.54,1.03,0,">1 nonsynonymous","I88L T148V",2
"lib1","SARS-CoV-2","AAGAGCTAATTCACAA",1,153.35,9.13,-1.64,0.05,2.85,1.06,0,">1 nonsynonymous","P54M L122I G174I",3
"lib1","SARS-CoV-2","AAGAGCTACACTCAGC",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K A14I K48S V52F Y119E K128C",6
"lib1","SARS-CoV-2","AAGAGCTATGAATGGA",2,58.17,9.49,-1.28,0.08,2.64,1.09,0,">1 nonsynonymous","A33T G116V F156Y",3
"lib1","SARS-CoV-2","AAGAGCTCCAAATGTT",4,2.74,NA,NA,NA,NA,NA,NA,"stop","P7* A190S T201L",3
"lib1","SARS-CoV-2","AAGAGCTTTCCATTAA",3,52.21,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C61N I72K G146R P161Q F167G",5
"lib1","SARS-CoV-2","AAGAGGAAACGTCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14H Y39A N58I V71* A89T L122P",6
"lib1","SARS-CoV-2","AAGAGGAAATATTATT",2,19.64,10.17,-0.59,0.18,2.39,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGAGGAAGGCAACTA",7,44.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19R Y35C C61R W106S K128M G166R E186S",7
"lib1","SARS-CoV-2","AAGAGGAATTGAATTA",2,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I P96T D98K G116V C158R",5
"lib1","SARS-CoV-2","AAGAGGACGGCTTTTT",13,105.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L122D G146E Y175P",3
"lib1","SARS-CoV-2","AAGAGGAGCGTAATTG",1,61.69,9.74,-1.02,0.09,2.55,1.09,0,">1 nonsynonymous","S41F F62R G155S",3
"lib1","SARS-CoV-2","AAGAGGATAACATACG",3,1.15,NA,NA,NA,NA,NA,NA,"stop","L38* G86N S147N N151S",4
"lib1","SARS-CoV-2","AAGAGGATGACTTTAT",6,64.49,7.29,-3.47,0.2,1.5,1.14,0.01,">1 nonsynonymous","S53Y N58K N157C",3
"lib1","SARS-CoV-2","AAGAGGCAATTTACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36T C49P K56L G101A N107A G117*",6
"lib1","SARS-CoV-2","AAGAGGCGCTTCTGGA",8,83.5,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T46Y V65A W106N D137P Q163V T201Q",6
"lib1","SARS-CoV-2","AAGAGGCTGTATTGAC",4,29.11,10.54,-0.22,0.07,2.9,1.03,0,">1 nonsynonymous","F8Y P54L T140R",3
"lib1","SARS-CoV-2","AAGAGGGACCAAGCCA",3,31.39,9.88,-0.89,0.08,2.01,1.06,0,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","AAGAGGGAGACCGATA",4,89.45,10.37,-0.4,0.05,2.88,1.03,0,">1 nonsynonymous","S36M I138Y",2
"lib1","SARS-CoV-2","AAGAGGTAGAGCTTTT",4,39.04,6.19,-4.57,1.01,1.5,1.27,0.04,">1 nonsynonymous","K48P N171S",2
"lib1","SARS-CoV-2","AAGAGGTCTGACTAAT",1,24.83,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C61L N92F N110P G117Q",4
"lib1","SARS-CoV-2","AAGAGTAAACCATATT",4,66.64,10.57,-0.19,0.07,2.83,1.06,0,">1 nonsynonymous","P96S K132E",2
"lib1","SARS-CoV-2","AAGAGTAAAGCAGATT",7,37.24,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5C S53F R124L L131W G152D",5
"lib1","SARS-CoV-2","AAGAGTAAATATAATT",2,25.5,9.31,-1.45,0.19,1.78,1.16,0.01,">1 nonsynonymous","F12Y V32K N64R",3
"lib1","SARS-CoV-2","AAGAGTAACCTTTAAA",1,34.56,10.48,-0.28,0.09,2.83,1,0,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","AAGAGTAACTAGATAA",2,55.52,10.79,0.03,0.11,2.86,1.08,0,"1 nonsynonymous","R16K",1
"lib1","SARS-CoV-2","AAGAGTACAAGAAATA",6,103.02,10.06,-0.71,0.08,2.49,1.02,0,">1 nonsynonymous","L57G E141G",2
"lib1","SARS-CoV-2","AAGAGTACATAATGAG",1,2.53,NA,NA,NA,NA,NA,NA,"stop","A81F W106*",2
"lib1","SARS-CoV-2","AAGAGTACATAGTAGT",1,0.6,NA,NA,NA,NA,NA,NA,"stop","N4* V32D",2
"lib1","SARS-CoV-2","AAGAGTACGGATCAAT",4,14.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17H V52R A67H Y93L G116S",5
"lib1","SARS-CoV-2","AAGAGTAGATATCAAA",6,62.33,10.68,-0.09,0.06,2.81,1.08,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","AAGAGTAGGACGGTTT",3,10.1,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","N13P V65K N107D T201R",4
"lib1","SARS-CoV-2","AAGAGTATAGACATAC",8,131.36,10.21,-0.55,0.06,2.57,1,0,"1 nonsynonymous","D34T",1
"lib1","SARS-CoV-2","AAGAGTATATCAACCC",5,106.36,10.78,0.02,0.08,2.81,1.08,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","AAGAGTATCTAGATAC",1,10.12,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6L N107L T201M",3
"lib1","SARS-CoV-2","AAGAGTCAAGAATCTA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","D59V Y91C Y119*",3
"lib1","SARS-CoV-2","AAGAGTCAATAATTTA",1,17.96,9.89,-0.88,0.14,1.66,1.01,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","AAGAGTCAATTTAAAT",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R S41Q V65K",3
"lib1","SARS-CoV-2","AAGAGTCACCATTCGT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","I2H F62I Q84* E154R",4
"lib1","SARS-CoV-2","AAGAGTCATGCAGCGA",5,124.09,10.12,-0.65,0.05,2.84,1.05,0,">1 nonsynonymous","A14S G116M E154S V173I",4
"lib1","SARS-CoV-2","AAGAGTCATTATAACG",12,413.3,10.7,-0.07,0.05,2.89,1.06,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","AAGAGTCATTTTCCGA",4,27.56,6.04,-4.72,1.03,1.5,1.25,0.03,">1 nonsynonymous","V37W V71E F160C",3
"lib1","SARS-CoV-2","AAGAGTCCGTACATCA",12,80.88,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G51I D68V N120D F160Y",4
"lib1","SARS-CoV-2","AAGAGTCGCTTCTGTT",6,53.47,8.53,-2.24,0.16,2.21,1.08,0.01,">1 nonsynonymous","Y119E G152L S184L",3
"lib1","SARS-CoV-2","AAGAGTCGTACCAAAA",5,1.59,NA,NA,NA,NA,NA,NA,"stop","P7S F12L K48P G86R D98*",5
"lib1","SARS-CoV-2","AAGAGTCTATACACGT",6,1.39,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","AAGAGTCTTGTTATCC",1,43.32,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T100D K114M L122C C158V",4
"lib1","SARS-CoV-2","AAGAGTGACAAATAAA",1,6.22,6,-4.76,2,3,1.18,0,">1 nonsynonymous","D34Y A42G P54C G86E G146F",5
"lib1","SARS-CoV-2","AAGAGTGATATGCTTT",1,9.03,9.87,-0.89,0.12,2.91,1.02,0.01,">1 nonsynonymous","N1Y N118A G196S",3
"lib1","SARS-CoV-2","AAGAGTGATCTGTGAA",13,140.72,10.47,-0.29,0.03,2.93,1.04,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","AAGAGTGCACACTTTA",1,28.51,6.32,-4.45,0.42,1.5,1.09,0.01,">1 nonsynonymous","V20L R136S",2
"lib1","SARS-CoV-2","AAGAGTGCCATAGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","AAGAGTTAAAATTAAA",1,13.58,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","L38Y I88N Q176V",3
"lib1","SARS-CoV-2","AAGAGTTAATGAGGCC",2,10.28,6.19,-4.58,0.61,3,1.1,0.01,">1 nonsynonymous","N13V C150S",2
"lib1","SARS-CoV-2","AAGAGTTACACTTGAA",1,21.5,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N4K C31N S43D S53K Y91L L162T",6
"lib1","SARS-CoV-2","AAGAGTTAGTGTTAAA",10,127.24,10.56,-0.2,0.03,2.93,1,0,">1 nonsynonymous","G9Y R78C",2
"lib1","SARS-CoV-2","AAGAGTTATTATTCAA",2,34.06,10.6,-0.16,0.07,2.91,1.07,0,">1 nonsynonymous","K128Y P191N",2
"lib1","SARS-CoV-2","AAGAGTTCAGGCTGTA",9,40.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V52L E76S W106A C150E",4
"lib1","SARS-CoV-2","AAGAGTTCGGCTCTAA",20,119.68,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","Y93R",1
"lib1","SARS-CoV-2","AAGAGTTGAGCAAATG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","L38D K94*",2
"lib1","SARS-CoV-2","AAGAGTTGTTACCTAT",8,104.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A81I G86F R124D E135D",4
"lib1","SARS-CoV-2","AAGAGTTTGGAGGGAA",2,23.57,7.42,-3.34,0.2,1.5,1.19,0.01,">1 nonsynonymous","Y35W N92T",2
"lib1","SARS-CoV-2","AAGAGTTTGTAAATCA",5,236.74,8.28,-2.48,0.14,2.06,1.08,0.01,">1 nonsynonymous","Y119P Q176L",2
"lib1","SARS-CoV-2","AAGAGTTTTAACCCAG",1,51.6,8.76,-2,0.13,2.38,1.08,0.01,">1 nonsynonymous","T85F N110M G117Q",3
"lib1","SARS-CoV-2","AAGATAAAAATCAAGC",5,30.43,10.48,-0.29,0.07,2.91,1.08,0,">1 nonsynonymous","V37S K132P",2
"lib1","SARS-CoV-2","AAGATAAAAGTAAGAG",6,23.34,7.4,-3.37,0.48,1.5,1,0.07,">1 nonsynonymous","Y35D V182N",2
"lib1","SARS-CoV-2","AAGATAAAATCTAGAG",7,61.03,10.41,-0.35,0.05,2.91,1.02,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","AAGATAAACGATAACC",1,43.12,9.94,-0.82,0.12,2.1,1.07,0.01,">1 nonsynonymous","E10Q V37R A105Y T201P",4
"lib1","SARS-CoV-2","AAGATAAACGGGATAG",5,23.05,6.37,-4.4,0.63,1.5,1.21,0.04,">1 nonsynonymous","S41P E76G Y119V",3
"lib1","SARS-CoV-2","AAGATAAACTCTACAA",1,4.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAGATAAAGTATGTCC",3,24.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C61R L95E D137F",3
"lib1","SARS-CoV-2","AAGATAAATTACGTGA",8,35.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F47N W106R Y119S P149I",4
"lib1","SARS-CoV-2","AAGATAAATTGACTAG",10,315.05,10.72,-0.04,0.05,2.87,1.06,0,">1 nonsynonymous","L38M P197S",2
"lib1","SARS-CoV-2","AAGATAACAAAAAAAG",6,4.21,NA,NA,NA,NA,NA,NA,"stop","T15E N107* L131F F160L",4
"lib1","SARS-CoV-2","AAGATAACAATGGGAT",5,117.61,10.68,-0.08,0.04,2.93,1.04,0,">1 nonsynonymous","L122G G152S T201E",3
"lib1","SARS-CoV-2","AAGATAACGATGTCAA",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110W F126E",2
"lib1","SARS-CoV-2","AAGATAACTAAAAACA",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S F99V W106D P133L C150T Q163S",6
"lib1","SARS-CoV-2","AAGATAACTCTAGAAA",4,52.77,10.37,-0.39,0.06,2.94,1.03,0,">1 nonsynonymous","P96S K198V",2
"lib1","SARS-CoV-2","AAGATAACTTATACAA",2,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Y W106T G117Y",3
"lib1","SARS-CoV-2","AAGATAAGAACTAATG",5,26.18,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V65L A105P I142H T148A",4
"lib1","SARS-CoV-2","AAGATAAGGAAAGGAC",3,25.42,8.43,-2.34,0.17,2,1.28,0.01,">1 nonsynonymous","W106Q Y119P",2
"lib1","SARS-CoV-2","AAGATAAGGAATTAAC",2,23.27,9.99,-0.78,0.16,2.42,1,0.01,">1 nonsynonymous","N40C G116K",2
"lib1","SARS-CoV-2","AAGATAAGGTATATAT",15,267.05,10.77,0.01,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATAAGGTCGAGTG",4,36.25,9.01,-1.75,0.33,1.5,1,0.06,">1 nonsynonymous","F12I L60P D97S K132Q G152R",5
"lib1","SARS-CoV-2","AAGATAAGTAACGCCG",2,31.63,10.79,0.03,0.09,2.88,1.05,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","AAGATAAGTCTAGGAA",1,59.08,10.59,-0.17,0.05,2.9,1,0,"1 nonsynonymous","F44G",1
"lib1","SARS-CoV-2","AAGATAATAAAGATAT",3,120.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y21I S129I Q176R",3
"lib1","SARS-CoV-2","AAGATAATAAATGACA",6,63.14,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","AAGATAATACCCATTC",5,192.67,10.69,-0.07,0.07,2.83,1.13,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","AAGATAATAGTTGAAC",6,37.84,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","T46I G51S L95Y S113P P149H Y159S",6
"lib1","SARS-CoV-2","AAGATAATCGTTTTAT",3,44.8,10.68,-0.08,0.06,2.92,1,0,"1 nonsynonymous","V173C",1
"lib1","SARS-CoV-2","AAGATAATGACCAAAC",9,39.61,6.05,-4.71,0.72,1.5,1.14,0.01,">1 nonsynonymous","Q84D L95Y",2
"lib1","SARS-CoV-2","AAGATAATGACCGTGA",6,63.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37F V65S G86K Q176T",4
"lib1","SARS-CoV-2","AAGATAATGAGGCCTA",7,0.91,NA,NA,NA,NA,NA,NA,"stop","A33Q Y119F P133*",3
"lib1","SARS-CoV-2","AAGATAATGGAAAATA",3,73.18,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N92F F156D",2
"lib1","SARS-CoV-2","AAGATAATTCCTATAA",1,38.8,10.78,0.01,0.05,2.94,1.04,0,"1 nonsynonymous","S43F",1
"lib1","SARS-CoV-2","AAGATAATTTATAAAA",6,39.93,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Q144R V181S",2
"lib1","SARS-CoV-2","AAGATACAAAAATTAC",2,20.67,7.78,-2.99,0.26,1.56,1.12,0.02,">1 nonsynonymous","A18E D112V I142V",3
"lib1","SARS-CoV-2","AAGATACAAAATAAGG",5,15.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R D34I V37M D68W Q176R",5
"lib1","SARS-CoV-2","AAGATACAAACAAGCC",1,17.18,6.91,-3.86,0.43,1.5,1.12,0.04,">1 nonsynonymous","K56W G86D",2
"lib1","SARS-CoV-2","AAGATACAACCAAGAT",1,19.91,9.64,-1.13,0.16,2.25,1.08,0.01,">1 nonsynonymous","V65G D90F Q163R P191N",4
"lib1","SARS-CoV-2","AAGATACAACGCGCAT",9,235,10.6,-0.17,0.02,2.9,1.03,0,">1 nonsynonymous","K114R E141R",2
"lib1","SARS-CoV-2","AAGATACAAGACTAGA",6,115.85,7.7,-3.06,0.21,1.5,1.15,0.01,">1 nonsynonymous","Y91A N120P",2
"lib1","SARS-CoV-2","AAGATACAGACATGAA",4,33.17,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F44A N58P G86V P96S Q176A",5
"lib1","SARS-CoV-2","AAGATACAGAGAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* R27G T46M P191H",4
"lib1","SARS-CoV-2","AAGATACCATACGAAA",1,37.53,10.86,0.1,0.08,2.96,1,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","AAGATACGAAGGAGAC",1,7.63,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","AAGATACGATATCGTC",8,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R S45G S129G G146L",4
"lib1","SARS-CoV-2","AAGATACGGGAACCTT",1,1.12,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAGATACTAAAAAGTC",3,0.66,NA,NA,NA,NA,NA,NA,"stop","L38T G86* I104C N171M",4
"lib1","SARS-CoV-2","AAGATACTACGACACC",1,47.84,6.98,-3.78,0.23,1.5,1.09,0.01,">1 nonsynonymous","A18L P149T G155F",3
"lib1","SARS-CoV-2","AAGATACTACTATTTC",6,32.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G Q84Y",2
"lib1","SARS-CoV-2","AAGATACTCCACCTCC",6,124.47,9.57,-1.2,0.09,2.76,1.09,0,">1 nonsynonymous","T140N S164D",2
"lib1","SARS-CoV-2","AAGATAGAAAGAAAAG",4,210.77,9.11,-1.65,0.08,2.46,1.13,0,">1 nonsynonymous","N110A Q176R",2
"lib1","SARS-CoV-2","AAGATAGAACACCGGT",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114S S129E",2
"lib1","SARS-CoV-2","AAGATAGAATAGGAAG",1,10.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6P S43M V77T G166F V180N",5
"lib1","SARS-CoV-2","AAGATAGAATATACAC",1,8.21,9.85,-0.92,0.24,2.76,1,0.01,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","AAGATAGAGTGACAAC",2,76.76,10.71,-0.05,0.08,2.96,1.03,0,"1 nonsynonymous","N40K",1
"lib1","SARS-CoV-2","AAGATAGCAAGAATAA",3,28.66,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","E10A K48S A89D F167P",4
"lib1","SARS-CoV-2","AAGATAGCCAAAGATT",1,10.48,10.21,-0.55,0.09,2.59,1,0,">1 nonsynonymous","N64F D90G",2
"lib1","SARS-CoV-2","AAGATAGCCAGTTATT",3,37.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G F70T T85N E141N E186Y",5
"lib1","SARS-CoV-2","AAGATAGCTCTACACT",2,32.6,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","N40I P54L F99I G116P",4
"lib1","SARS-CoV-2","AAGATAGGCATTACAA",1,10.4,9.88,-0.88,0.19,2.55,1.01,0.01,">1 nonsynonymous","D90W N120C",2
"lib1","SARS-CoV-2","AAGATAGGTCACCGAA",1,10.05,10.76,-0.01,0.07,2.92,1.08,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","AAGATAGTAGTGGTAT",6,61.37,8.77,-1.99,0.09,2.45,1.12,0,">1 nonsynonymous","D112N L122K",2
"lib1","SARS-CoV-2","AAGATAGTGAAAAAAT",1,26.3,10.83,0.07,0.1,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATAGTTACATCAA",3,122.01,10.27,-0.49,0.05,3,1,0,">1 nonsynonymous","G9V K87L",2
"lib1","SARS-CoV-2","AAGATAGTTGACTGTC",6,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V V103S E154R",3
"lib1","SARS-CoV-2","AAGATATAAAAGAAAG",5,1.72,NA,NA,NA,NA,NA,NA,"stop","I2F D112*",2
"lib1","SARS-CoV-2","AAGATATAAGCGTTTC",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M G117Y",2
"lib1","SARS-CoV-2","AAGATATAATATATAT",4,1.38,NA,NA,NA,NA,NA,NA,"stop","F70L P149M E154*",3
"lib1","SARS-CoV-2","AAGATATACCTTACGG",3,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L D90S N107M Y165T",4
"lib1","SARS-CoV-2","AAGATATACGCGATAG",3,19.01,9.45,-1.32,0.38,1.62,1.02,0.06,">1 nonsynonymous","I2R D90E W106C T201D",4
"lib1","SARS-CoV-2","AAGATATAGCATTACA",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22K S43V C61L P96S R136V",5
"lib1","SARS-CoV-2","AAGATATAGTAAGTCA",6,47.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I28T K48F N58F N109V",4
"lib1","SARS-CoV-2","AAGATATCCAGACTGC",2,29.66,8.77,-2,0.18,2.05,1.12,0.01,">1 nonsynonymous","R73S A105I",2
"lib1","SARS-CoV-2","AAGATATCCATAACTG",3,10.7,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","K94P G146M Q168Y",3
"lib1","SARS-CoV-2","AAGATATCCGTAACTA",3,66.09,10.51,-0.25,0.05,2.94,1.01,0,">1 nonsynonymous","F44Q T201L",2
"lib1","SARS-CoV-2","AAGATATGCAGACTAT",2,12.47,8.61,-2.16,0.24,2.68,1.09,0.02,">1 nonsynonymous","G146R G174K",2
"lib1","SARS-CoV-2","AAGATATGTTGTAATT",6,117.28,7.43,-3.34,0.13,1.94,1.17,0,">1 nonsynonymous","K87C N157Y",2
"lib1","SARS-CoV-2","AAGATATTATCCAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* P149W",2
"lib1","SARS-CoV-2","AAGATATTGAGTAACA",2,13.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N30G C158V G166E",3
"lib1","SARS-CoV-2","AAGATATTTCAAATGG",2,30.46,10.38,-0.38,0.08,2.93,1.04,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","AAGATATTTCAATTAC",2,5.33,10.72,-0.04,0.14,2.61,1.38,0.01,"1 nonsynonymous","P197L",1
"lib1","SARS-CoV-2","AAGATATTTCCAATAT",8,75.72,10.47,-0.3,0.06,2.97,1,0,"1 nonsynonymous","Y35P",1
"lib1","SARS-CoV-2","AAGATCAAAAAGATGT",16,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L F156K",2
"lib1","SARS-CoV-2","AAGATCAACACACAGT",7,60.53,6,-4.76,1.19,1.5,1.2,0.01,">1 nonsynonymous","C6T Y35S G86V N92L",4
"lib1","SARS-CoV-2","AAGATCAAGTCTCCAA",2,19.61,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K26N L57F G74S D97E",4
"lib1","SARS-CoV-2","AAGATCAATGAGCTTT",3,25.26,9.5,-1.27,0.14,1.88,1.05,0.01,"1 nonsynonymous","L162K",1
"lib1","SARS-CoV-2","AAGATCACCAATATTG",14,139.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D137M P149V R179K",3
"lib1","SARS-CoV-2","AAGATCAGGCTTCGAA",5,18.68,10.46,-0.31,0.11,2.87,1.09,0,">1 nonsynonymous","S139T S184K",2
"lib1","SARS-CoV-2","AAGATCAGTAAAGAAA",3,8.43,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A14L D90P V103D Q168K",4
"lib1","SARS-CoV-2","AAGATCATAAATGCAA",2,77.84,8.11,-2.66,0.16,1.5,1.12,0.01,">1 nonsynonymous","Y121D L188P T201N",3
"lib1","SARS-CoV-2","AAGATCATAAATTCAT",3,31,10.73,-0.04,0.07,2.98,1,0,">1 nonsynonymous","Y39L D90F",2
"lib1","SARS-CoV-2","AAGATCATAACCCTAT",4,38.57,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51C W106M Y165L N171A",4
"lib1","SARS-CoV-2","AAGATCATTTCGACCG",2,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E G86A N130L N171S V180D",5
"lib1","SARS-CoV-2","AAGATCCAAATACTAT",2,70.78,8.46,-2.3,0.08,2.18,1.09,0,">1 nonsynonymous","Y91F N107L I138V T201V",4
"lib1","SARS-CoV-2","AAGATCCACCTAACCT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","I88S A105R K128M F167*",4
"lib1","SARS-CoV-2","AAGATCCAGTGGGGCC",3,9.54,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5S C49N L60F L95N",4
"lib1","SARS-CoV-2","AAGATCCCAAAAATTC",1,21.34,10.41,-0.36,0.08,2.81,1.03,0,">1 nonsynonymous","I138Y K199N",2
"lib1","SARS-CoV-2","AAGATCCCAGCAGTTT",4,62.89,8.14,-2.62,0.19,1.5,1.1,0.01,">1 nonsynonymous","I28M P54F Q79R D90Q D97G E141R",6
"lib1","SARS-CoV-2","AAGATCCCCCGATCAC",7,100.48,10.76,-0.01,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATCCGAGTCTGCG",1,32.71,8.61,-2.16,0.12,2.84,1.09,0.01,">1 nonsynonymous","F160T Q168K",2
"lib1","SARS-CoV-2","AAGATCCGCCGGACCA",8,1.37,NA,NA,NA,NA,NA,NA,"stop","Y21W F44S T55Y I88H C102* P149Q V173C L183D",8
"lib1","SARS-CoV-2","AAGATCCTACGATACC",3,16.53,6.81,-3.95,0.43,1.5,1.06,0.06,">1 nonsynonymous","P82D D90V G166P",3
"lib1","SARS-CoV-2","AAGATCCTATATCTGG",1,35.73,7.83,-2.93,0.16,1.5,1.14,0.01,">1 nonsynonymous","D112L I142F",2
"lib1","SARS-CoV-2","AAGATCCTATCATCGA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","L95* T140W Q168P R179W",4
"lib1","SARS-CoV-2","AAGATCCTGGGATTAT",5,0.76,NA,NA,NA,NA,NA,NA,"stop","R16* I88S",2
"lib1","SARS-CoV-2","AAGATCCTTGAAGAAA",2,12.52,10.85,0.08,0.09,2.99,1,0,"1 nonsynonymous","T63D",1
"lib1","SARS-CoV-2","AAGATCGACATATACA",9,1.93,NA,NA,NA,NA,NA,NA,"stop","F12* L60S",2
"lib1","SARS-CoV-2","AAGATCGAGTCGACTA",1,17.41,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V37H R73W I88E T201V",4
"lib1","SARS-CoV-2","AAGATCGATTACTTAA",5,75.67,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8L C61A R73P P82L Y121K G146A",6
"lib1","SARS-CoV-2","AAGATCGCAGCGACCG",1,11.73,6,-4.76,2,3,1.09,0,">1 nonsynonymous","E76S S139A P177A",3
"lib1","SARS-CoV-2","AAGATCGTAAAGCTTT",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L W106Y",2
"lib1","SARS-CoV-2","AAGATCTAAACTTAAG",1,22.93,9.86,-0.91,0.08,2.85,1.09,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","AAGATCTAAGCATACG",2,27.96,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T100Y F134L G146V P169L",4
"lib1","SARS-CoV-2","AAGATCTACAACTCTT",2,6.49,6.29,-4.48,0.31,3,1.15,0.01,">1 nonsynonymous","F12E P54K L122A P149Y K199V",5
"lib1","SARS-CoV-2","AAGATCTAGATGCAGA",3,13.84,10.6,-0.17,0.03,3,1,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","AAGATCTATGAGGGCT",17,74.07,6.38,-4.38,0.43,1.5,1.23,0.01,">1 nonsynonymous","A42L G101T",2
"lib1","SARS-CoV-2","AAGATCTCAAACCAAA",8,28.6,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I88L Y165K",2
"lib1","SARS-CoV-2","AAGATCTCAACCCTGT",13,2,NA,NA,NA,NA,NA,NA,"stop","I2S C61M D68* L95P",4
"lib1","SARS-CoV-2","AAGATCTCTAAAAAAC",3,10.69,6,-4.76,2,3,1.06,0,">1 nonsynonymous","T15I V32H G51S K94G",4
"lib1","SARS-CoV-2","AAGATCTGATCTTACT",12,228.53,10.13,-0.63,0.06,2.58,1.02,0,">1 nonsynonymous","N40R L57G",2
"lib1","SARS-CoV-2","AAGATCTGTAACTAAA",3,109.88,10.44,-0.32,0.05,2.93,1.01,0,">1 nonsynonymous","K56R L60D",2
"lib1","SARS-CoV-2","AAGATCTTGATGGACG",2,18.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R N92S Y143D S164L",4
"lib1","SARS-CoV-2","AAGATGAAAACCAGAT",14,331.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G83V P177W",2
"lib1","SARS-CoV-2","AAGATGAAACCTTATG",6,85.51,6.14,-4.62,0.77,1.5,1.18,0.02,">1 nonsynonymous","N40C L95T",2
"lib1","SARS-CoV-2","AAGATGAACAAACCTT",4,13.76,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C61R Y66N V103N",3
"lib1","SARS-CoV-2","AAGATGAAGCCGAGAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15A",1
"lib1","SARS-CoV-2","AAGATGAAGCGTGATT",9,107.29,10.76,0,0.06,2.93,1.02,0,">1 nonsynonymous","N64T T140N",2
"lib1","SARS-CoV-2","AAGATGAATTCAAAAA",8,3.03,NA,NA,NA,NA,NA,NA,"stop","C61* R136T",2
"lib1","SARS-CoV-2","AAGATGACAAAAAATC",2,13.04,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G9M W23S F70L S113C F134G",5
"lib1","SARS-CoV-2","AAGATGACCCACCAAC",2,27.06,9.61,-1.16,0.1,1.94,1.1,0,">1 nonsynonymous","N13S V37I Y178L",3
"lib1","SARS-CoV-2","AAGATGACGGTCTACG",4,42.55,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F12R A33Q C49W G86V",4
"lib1","SARS-CoV-2","AAGATGACTATCTCCA",1,13.63,10.61,-0.16,0.21,2.75,1.13,0.04,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","AAGATGACTCTTAGTT",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I C150H",2
"lib1","SARS-CoV-2","AAGATGAGATGCCATT",7,53.9,9,-1.76,0.26,1.5,1.02,0.04,">1 nonsynonymous","L5R K94P",2
"lib1","SARS-CoV-2","AAGATGAGCATCACTC",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L V103K",2
"lib1","SARS-CoV-2","AAGATGAGCTTAAGGT",7,57.48,9.96,-0.81,0.13,2.41,1.05,0.01,">1 nonsynonymous","F62Y R136F",2
"lib1","SARS-CoV-2","AAGATGAGCTTGTTTA",2,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E K114V",2
"lib1","SARS-CoV-2","AAGATGATAATATGAG",2,44.73,10.76,-0.01,0.08,2.9,1.09,0,"1 nonsynonymous","N1P",1
"lib1","SARS-CoV-2","AAGATGATATCTACCA",3,48.43,10.56,-0.2,0.07,2.8,1.06,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","AAGATGATCTTATCCG",16,50.58,6.05,-4.71,0.89,1.5,1.26,0.02,">1 nonsynonymous","E10Y S45I D90C R127S Y159G E186V",6
"lib1","SARS-CoV-2","AAGATGATTAGTTGAA",5,56.17,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V103C R127P",2
"lib1","SARS-CoV-2","AAGATGATTTGACTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib1","SARS-CoV-2","AAGATGCAAGCTGCCG",3,39.52,9.85,-0.92,0.09,2.82,1.01,0,">1 nonsynonymous","S43K N107D",2
"lib1","SARS-CoV-2","AAGATGCAATTATAAT",1,8.57,9.98,-0.79,0.11,3,1,0,">1 nonsynonymous","Y119G E154S",2
"lib1","SARS-CoV-2","AAGATGCACTTTAATA",5,70.39,10.74,-0.02,0.04,2.88,1.07,0,"1 nonsynonymous","A190Y",1
"lib1","SARS-CoV-2","AAGATGCAGATATAGC",4,44.01,9.94,-0.83,0.1,2.18,1.06,0,">1 nonsynonymous","N13L A33H",2
"lib1","SARS-CoV-2","AAGATGCAGTAACAGT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","N4* L131V",2
"lib1","SARS-CoV-2","AAGATGCCAGGACTAA",2,14.88,10.74,-0.02,0.11,2.81,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGATGCCCCTTAACG",2,32.44,6.17,-4.59,0.47,1.5,1.08,0.01,">1 nonsynonymous","Y35R D68V",2
"lib1","SARS-CoV-2","AAGATGCCGCAGTTGG",10,145.21,8.5,-2.27,0.11,2.24,1.11,0,">1 nonsynonymous","I2S Y119M R136N",3
"lib1","SARS-CoV-2","AAGATGCCTAACCGCT",5,30.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28G L57N A89S",3
"lib1","SARS-CoV-2","AAGATGCGTGCGGTAG",2,2.13,NA,NA,NA,NA,NA,NA,"stop","N4T N58F D90* F99L D112L",5
"lib1","SARS-CoV-2","AAGATGCTATTATGCG",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I D90Q V103P F160S V181E",5
"lib1","SARS-CoV-2","AAGATGCTCCTAAAAA",1,43.07,10.55,-0.21,0.08,2.83,1.11,0,">1 nonsynonymous","P54H A81K Q168H",3
"lib1","SARS-CoV-2","AAGATGCTTGTGCTAC",2,66.28,9.19,-1.57,0.15,1.5,1.11,0.01,">1 nonsynonymous","A89V V173S",2
"lib1","SARS-CoV-2","AAGATGGAAATTTACT",1,0.3,NA,NA,NA,NA,NA,NA,"stop","G117Q P133* Q163P",3
"lib1","SARS-CoV-2","AAGATGGAGACGACCG",4,106.09,10.24,-0.52,0.05,2.89,1,0,">1 nonsynonymous","A14V S29Q A42D V153Q",4
"lib1","SARS-CoV-2","AAGATGGAGGTATAAT",4,99.88,9.79,-0.98,0.06,2.81,1.04,0,">1 nonsynonymous","C61S G155L Q163S",3
"lib1","SARS-CoV-2","AAGATGGATATCCTAT",2,33.78,9.93,-0.83,0.08,2.31,1.06,0,"1 nonsynonymous","G51Y",1
"lib1","SARS-CoV-2","AAGATGGATGTTCTGT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L S45V L57G T63L Y159I",5
"lib1","SARS-CoV-2","AAGATGGCCGAGGGGC",2,47.71,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I28L I72G Y91T V181T",4
"lib1","SARS-CoV-2","AAGATGGGGACCGCAA",12,48.44,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36Q R73M K87M D97S Q168S R179G T201L",7
"lib1","SARS-CoV-2","AAGATGGGGGCAAGAC",8,56.12,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R127G F167T",2
"lib1","SARS-CoV-2","AAGATGGGTCTCGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F Y93V A105D Y121I V173P",5
"lib1","SARS-CoV-2","AAGATGGGTTACTGCG",2,49,6.43,-4.34,0.48,1.5,1.18,0.02,">1 nonsynonymous","I72L T140P G146F",3
"lib1","SARS-CoV-2","AAGATGTAAACGCCAA",5,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V Y178H A190D",3
"lib1","SARS-CoV-2","AAGATGTAAATGTCCA",4,62.96,10.68,-0.08,0.07,2.89,1.05,0,">1 nonsynonymous","Y50F V65L",2
"lib1","SARS-CoV-2","AAGATGTCATCAAGAC",11,176.25,10.64,-0.12,0.03,2.92,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AAGATGTGGCAGGCAT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","N107R Q163*",2
"lib1","SARS-CoV-2","AAGATGTTAGTGTTAG",1,0.53,NA,NA,NA,NA,NA,NA,"stop","R16E R25* T55P",3
"lib1","SARS-CoV-2","AAGATGTTTAAACAAG",2,10.94,10.76,-0.01,0.16,2.77,1.05,0.01,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","AAGATTAAAGGATACA",5,27.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A145I V181S",2
"lib1","SARS-CoV-2","AAGATTAAATAAACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A22R S41* D98L V115H K199P",5
"lib1","SARS-CoV-2","AAGATTAAATGGAGGA",2,24.35,6,-4.76,1.98,1.5,1.09,0.01,">1 nonsynonymous","V20E A105N P133T",3
"lib1","SARS-CoV-2","AAGATTAACAATACAT",2,59.14,10.37,-0.4,0.02,2.96,1.03,0,">1 nonsynonymous","V65L F134S",2
"lib1","SARS-CoV-2","AAGATTAACTACGATG",3,27.09,10.66,-0.1,0.05,2.97,1,0,"1 nonsynonymous","G83Q",1
"lib1","SARS-CoV-2","AAGATTAAGACACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5E V153L F160P T170*",4
"lib1","SARS-CoV-2","AAGATTAAGATAATCG",1,47.2,10.33,-0.43,0.03,2.93,1.01,0,">1 nonsynonymous","K56P I104F N151Y",3
"lib1","SARS-CoV-2","AAGATTAAGTTACACA",4,145.8,10.82,0.06,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATTAATCTTCATT",2,1.31,NA,NA,NA,NA,NA,NA,"stop","F12Y I104Y A145V K199*",4
"lib1","SARS-CoV-2","AAGATTACAAAAACAA",2,34.7,10.33,-0.44,0.07,2.38,1.09,0,">1 nonsynonymous","R16I P54L P96Q",3
"lib1","SARS-CoV-2","AAGATTACATGAAACA",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94W A105F",2
"lib1","SARS-CoV-2","AAGATTACGCTGATTA",3,81.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35F N118S F126S G152I",4
"lib1","SARS-CoV-2","AAGATTAGGTGGTTTA",5,39.34,6,-4.76,0.88,1.5,1.12,0.01,">1 nonsynonymous","I2L C61R R124W V181W",4
"lib1","SARS-CoV-2","AAGATTAGTAAGGATA",5,90.05,10.43,-0.33,0.04,2.94,1.03,0,">1 nonsynonymous","I2S T170S",2
"lib1","SARS-CoV-2","AAGATTAGTCACAATC",2,25.74,9.66,-1.1,0.1,1.95,1.09,0,">1 nonsynonymous","A14I Y39L S45P Y123K T148F",5
"lib1","SARS-CoV-2","AAGATTATAATACTAG",2,38.13,10.9,0.14,0.09,2.89,1.04,0,">1 nonsynonymous","T55S N130K",2
"lib1","SARS-CoV-2","AAGATTATACATGTAT",9,185.98,10.73,-0.03,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATTATATATATGC",4,0,NA,NA,NA,NA,NA,NA,"stop","Q79L L95* P149G",3
"lib1","SARS-CoV-2","AAGATTATCCATCATG",5,19.87,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C6Y A18T Y119S N151K C158S V173N",6
"lib1","SARS-CoV-2","AAGATTATCTAGGTCA",12,196.18,10.77,0,0.07,2.93,1.04,0,">1 nonsynonymous","L122A P149T",2
"lib1","SARS-CoV-2","AAGATTATGGCCTGTT",5,46.89,10.61,-0.16,0.06,2.91,1,0,"1 nonsynonymous","S45R",1
"lib1","SARS-CoV-2","AAGATTATTATTTTAA",1,46.93,10.78,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","AAGATTCAATGTGACT",5,110.68,10.83,0.07,0.08,2.88,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGATTCCGAAACGCG",3,48.54,8.24,-2.53,0.14,2.71,1.04,0.01,">1 nonsynonymous","G9R Y175M",2
"lib1","SARS-CoV-2","AAGATTCCTAGTTGGC",1,10.74,9.42,-1.34,0.26,2.18,1.08,0.01,">1 nonsynonymous","V11N S200A",2
"lib1","SARS-CoV-2","AAGATTCGAGAAATCA",10,35.87,6.53,-4.23,0.38,1.5,1.14,0.01,">1 nonsynonymous","V11I A18C D34M P54M L125Y N151D",6
"lib1","SARS-CoV-2","AAGATTCGCCTTTTAG",2,12.32,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G9K Y21L V103E P149S",4
"lib1","SARS-CoV-2","AAGATTCGTTTCAAAT",5,46.4,8.53,-2.24,0.15,1.59,1.1,0.01,">1 nonsynonymous","D59A Y121I L162V A192T",4
"lib1","SARS-CoV-2","AAGATTCTAAAGGTAT",6,42.48,10.57,-0.2,0.07,2.86,1.01,0,">1 nonsynonymous","Y35V A42S I138E",3
"lib1","SARS-CoV-2","AAGATTCTCTCTTTAA",5,111.86,10.69,-0.07,0.06,2.94,1.03,0,">1 nonsynonymous","A42H Y143F",2
"lib1","SARS-CoV-2","AAGATTCTGATAATTA",10,208.07,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N4T K132Q P149G G155R Y178E L183Y",6
"lib1","SARS-CoV-2","AAGATTGAAATCCCCT",6,43.59,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G101I K114Y G146L",3
"lib1","SARS-CoV-2","AAGATTGACAACTTTC",1,35.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9W D97F G146Q Y159A",4
"lib1","SARS-CoV-2","AAGATTGATAAAACAT",2,0.18,NA,NA,NA,NA,NA,NA,"stop","T15* F70T V77L",3
"lib1","SARS-CoV-2","AAGATTGCAAACAGCT",5,24.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51S L95Q R136S",3
"lib1","SARS-CoV-2","AAGATTGCCACCCATA",2,60.46,9.98,-0.78,0.08,2.22,1.01,0,">1 nonsynonymous","Y39T K48M Y66A",3
"lib1","SARS-CoV-2","AAGATTGCCGCATGCT",7,76.7,10.79,0.03,0.09,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGATTGGAATTTTAT",1,9.03,6,-4.76,2,1.5,1.12,0.08,">1 nonsynonymous","F8D T55E S108I N130V E154N",5
"lib1","SARS-CoV-2","AAGATTGGATCCAAAC",2,37.15,6,-4.76,1.16,3,1.19,0.01,">1 nonsynonymous","F8P D98A Y119V",3
"lib1","SARS-CoV-2","AAGATTGGCTATGTAC",15,214.49,8.59,-2.17,0.11,2.48,1.11,0.01,">1 nonsynonymous","K48I D97S G117Y",3
"lib1","SARS-CoV-2","AAGATTGGTAATTGCA",2,39.35,10.82,0.05,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGATTTAACAGATAT",3,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N G101S F160G V181S",4
"lib1","SARS-CoV-2","AAGATTTAAGACTAAA",9,113.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V52A S139L Y143C Y175F",4
"lib1","SARS-CoV-2","AAGATTTAAGCAACAC",3,1.38,NA,NA,NA,NA,NA,NA,"stop","E10K A89* C102V",3
"lib1","SARS-CoV-2","AAGATTTAAGTAGAAA",2,17.04,9.21,-1.55,0.17,2.04,1.13,0.02,">1 nonsynonymous","Y121N P149I",2
"lib1","SARS-CoV-2","AAGATTTAATCCTTGG",7,37.94,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S19Q I72K D90F",3
"lib1","SARS-CoV-2","AAGATTTCGATGCTTG",2,42.48,9.19,-1.57,0.13,2.67,1.13,0.01,">1 nonsynonymous","V11L K26V L60R S129R Q168T",5
"lib1","SARS-CoV-2","AAGATTTCGCGAATAT",3,30.92,9.87,-0.89,0.16,1.87,1.04,0.01,">1 nonsynonymous","L5I K48V V71L L162I",4
"lib1","SARS-CoV-2","AAGATTTCTACTGGCT",2,29.53,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D34G P133A C150S P161F",4
"lib1","SARS-CoV-2","AAGATTTCTAGGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","K48F F62* D90K I104T T140H V182G",6
"lib1","SARS-CoV-2","AAGATTTCTTACTCCT",5,100.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N58L N107R Y143S V173T",4
"lib1","SARS-CoV-2","AAGATTTCTTCATACC",5,1.37,NA,NA,NA,NA,NA,NA,"stop","G172V P197*",2
"lib1","SARS-CoV-2","AAGATTTGAACTCTTT",15,178.06,9.11,-1.65,0.07,2.25,1.12,0,">1 nonsynonymous","C31G F47L K56N K87T",4
"lib1","SARS-CoV-2","AAGATTTGATAAAGCG",1,31.23,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","A67H C158W",2
"lib1","SARS-CoV-2","AAGATTTGATATATTC",2,1.22,NA,NA,NA,NA,NA,NA,"stop","A18P I28A C102W K114* C150G",5
"lib1","SARS-CoV-2","AAGATTTTACAGACAA",2,37.95,6.68,-4.08,0.39,1.5,1.18,0.02,">1 nonsynonymous","F8L G51Y S147I Q176P",4
"lib1","SARS-CoV-2","AAGATTTTCCCGAGAC",4,23.9,6.45,-4.32,0.55,1.5,1.13,0.03,">1 nonsynonymous","N58F F70Y G74C Y121K A145I",5
"lib1","SARS-CoV-2","AAGATTTTGAAAGTTG",1,44.04,6.15,-4.61,0.58,1.5,1.13,0.01,">1 nonsynonymous","S19I K114M L122A",3
"lib1","SARS-CoV-2","AAGCAAAAAAACCATA",2,6.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8R I104M G146M",3
"lib1","SARS-CoV-2","AAGCAAAAAACTTGTG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","R27* G116L T201L",3
"lib1","SARS-CoV-2","AAGCAAAAACGAAAAG",9,217.7,10.49,-0.28,0.03,2.88,1.04,0,">1 nonsynonymous","D34N C61A",2
"lib1","SARS-CoV-2","AAGCAAAAACTAAAAC",1,0.11,NA,NA,NA,NA,NA,NA,"stop","D112H Y119*",2
"lib1","SARS-CoV-2","AAGCAAAAGAATGAAT",6,46.33,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","R16E S43D C61T F167D V173L",5
"lib1","SARS-CoV-2","AAGCAAAAGGCATGAA",3,152.24,9.78,-0.98,0.04,2.85,1.06,0,">1 nonsynonymous","N4D N157D",2
"lib1","SARS-CoV-2","AAGCAAAAGGTACGCC",1,33.61,8.18,-2.58,0.26,1.5,1.1,0.03,">1 nonsynonymous","V32W F44L Y121R",3
"lib1","SARS-CoV-2","AAGCAAAATAAAATTC",5,15.23,7.94,-2.82,0.19,1.97,1.06,0.01,">1 nonsynonymous","C6R L38S F62H",3
"lib1","SARS-CoV-2","AAGCAAAATAAATATA",1,23.23,10.47,-0.29,0.09,2.96,1.04,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AAGCAAAATTCGTCTT",8,66.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11Y I80V T100S I104T Y178K",5
"lib1","SARS-CoV-2","AAGCAAACAAAACTAC",2,58.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T15D Y123C N157L Q176R",4
"lib1","SARS-CoV-2","AAGCAAACAAGACCAG",3,25.67,9.91,-0.85,0.25,1.7,1.08,0.03,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","AAGCAAACAATAGGAA",2,20.68,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G51S L60R G146V",3
"lib1","SARS-CoV-2","AAGCAAACAGTTTTTT",2,14.48,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W23L Q84F V103N Y119L T201S",5
"lib1","SARS-CoV-2","AAGCAAACATTTGCTT",4,115.39,10.28,-0.48,0.05,2.74,1.04,0,"1 nonsynonymous","R136W",1
"lib1","SARS-CoV-2","AAGCAAACCACAAGTC",3,48.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W I88D D98W Q163P",4
"lib1","SARS-CoV-2","AAGCAAACCTGTTTAC",1,98.63,10.74,-0.03,0.05,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCAAACTCATAAGT",5,26.43,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","P82S V103C L122V F160R K198E",5
"lib1","SARS-CoV-2","AAGCAAACTCCTCACA",2,61.94,9.81,-0.96,0.08,2.61,1.07,0,">1 nonsynonymous","S19P S53P L60V I142L",4
"lib1","SARS-CoV-2","AAGCAAACTGAGACGT",5,9.79,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","E76F Y178D",2
"lib1","SARS-CoV-2","AAGCAAAGGAAGGCGA",2,31.93,8.47,-2.3,0.13,1.5,1.1,0.01,">1 nonsynonymous","I28Q S184L",2
"lib1","SARS-CoV-2","AAGCAAAGGGAAGTAA",11,189.36,10.44,-0.32,0.02,2.94,1.01,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","AAGCAAAGTGATATAA",5,40.85,10.79,0.02,0.07,2.88,1.1,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","AAGCAAAGTTCACCAC",4,173.34,10.6,-0.17,0.04,2.92,1,0,">1 nonsynonymous","S36Q Y178N",2
"lib1","SARS-CoV-2","AAGCAAATCCGATACA",1,24.28,6.08,-4.68,0.95,1.5,1.17,0.03,">1 nonsynonymous","G83S G86E G174I",3
"lib1","SARS-CoV-2","AAGCAAATTATAGCTA",2,9.64,8.01,-2.75,0.2,1.83,1.14,0.02,">1 nonsynonymous","G9L P149H F167W",3
"lib1","SARS-CoV-2","AAGCAACAAAAGCATA",5,2.09,NA,NA,NA,NA,NA,NA,"stop","L5I S45F N151*",3
"lib1","SARS-CoV-2","AAGCAACAACTCGCAA",7,24.87,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V37I Y91G S147L G155I",4
"lib1","SARS-CoV-2","AAGCAACACTATGTAC",3,0,NA,NA,NA,NA,NA,NA,"stop","F44S N58I Y66C P82Y D90A E141* P149F G174Q",8
"lib1","SARS-CoV-2","AAGCAACACTGAGAAG",6,55.41,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V77S G86W",2
"lib1","SARS-CoV-2","AAGCAACATTGGTAGG",4,86.8,10.53,-0.24,0.06,2.87,1.04,0,">1 nonsynonymous","S53H D98L",2
"lib1","SARS-CoV-2","AAGCAACCAGATCATT",1,11.96,6,-4.76,0.8,3,1.14,0.01,">1 nonsynonymous","A89G G116V C150R",3
"lib1","SARS-CoV-2","AAGCAACCATTCGACA",1,10.34,10.05,-0.71,0.09,2.87,1,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","AAGCAACCGCAAACCT",5,62.75,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","P7S Y35G W106A Y121M",4
"lib1","SARS-CoV-2","AAGCAACCTTGAATAT",1,5.73,7.28,-3.48,0.3,1.54,1.15,0.02,">1 nonsynonymous","K48L N157K G174L",3
"lib1","SARS-CoV-2","AAGCAACGACGAACAT",3,1.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y66R",1
"lib1","SARS-CoV-2","AAGCAACGATATCCGA",3,34.99,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","V11A D59I V77G D97M C195W",5
"lib1","SARS-CoV-2","AAGCAACGGATACATT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","F47L L57* P82L D90S T201G",5
"lib1","SARS-CoV-2","AAGCAACGGGAATTAA",4,66.05,6,-4.76,1.18,1.5,1.15,0.01,">1 nonsynonymous","C61P R136P Y178I",3
"lib1","SARS-CoV-2","AAGCAACTAATTCGTT",1,13.97,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S41P K94L P161Y F167N",4
"lib1","SARS-CoV-2","AAGCAACTCTAACAAG",3,50.25,10.83,0.07,0.09,2.81,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCAACTTAACCTGC",4,0.31,NA,NA,NA,NA,NA,NA,"stop","F17* L38T C102M",3
"lib1","SARS-CoV-2","AAGCAACTTGAGTGCC",1,35.11,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C6R F44T F62R A67V F126D G166A",6
"lib1","SARS-CoV-2","AAGCAACTTTTGTGAT",6,28.03,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S41K D112H E141S",3
"lib1","SARS-CoV-2","AAGCAAGAAAACCACA",6,59.13,8.39,-2.38,0.28,1.5,1.03,0.03,">1 nonsynonymous","V103M T148G",2
"lib1","SARS-CoV-2","AAGCAAGAAGTGCAAG",18,137.09,10.73,-0.03,0.06,2.88,1.05,0,">1 nonsynonymous","Y39I F160C",2
"lib1","SARS-CoV-2","AAGCAAGATGGGTGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5* F44L D90R Y143E Q163E",5
"lib1","SARS-CoV-2","AAGCAAGATTTTTATA",3,30.53,6.35,-4.41,0.38,1.5,1.09,0.01,">1 nonsynonymous","V32A L60W G83D N120L R127L",5
"lib1","SARS-CoV-2","AAGCAAGCAGCCTAAG",1,43.9,10.66,-0.11,0.06,2.92,1.02,0,">1 nonsynonymous","N1I K132R",2
"lib1","SARS-CoV-2","AAGCAAGCATTAACCA",3,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87C Y121F",2
"lib1","SARS-CoV-2","AAGCAAGGAAGCGACT",5,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N F44L T170A V182Q",4
"lib1","SARS-CoV-2","AAGCAAGGCGAATTCC",1,15.32,10.78,0.01,0.15,2.78,1.15,0.01,">1 nonsynonymous","T63A L122Y",2
"lib1","SARS-CoV-2","AAGCAAGTATACCGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* R127M",2
"lib1","SARS-CoV-2","AAGCAAGTCAAAGTCG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y I104Q",2
"lib1","SARS-CoV-2","AAGCAAGTCCCTCACG",4,79.39,10.53,-0.24,0.05,2.85,1.04,0,">1 nonsynonymous","F44G N58Q",2
"lib1","SARS-CoV-2","AAGCAAGTGAACCCAG",6,34.16,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F99L D112M F160Y",3
"lib1","SARS-CoV-2","AAGCAATAAAACCTAC",10,85.28,9.69,-1.08,0.1,1.96,1.07,0,">1 nonsynonymous","K128W S139V",2
"lib1","SARS-CoV-2","AAGCAATAAAACCTGT",9,85.18,10.71,-0.06,0.05,2.89,1.07,0,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","AAGCAATAACGATAAA",2,47.59,9.66,-1.1,0.07,2.88,1.04,0,"1 nonsynonymous","A145L",1
"lib1","SARS-CoV-2","AAGCAATAGAACACAT",9,123.08,10.87,0.1,0.09,2.92,1.04,0,">1 nonsynonymous","Y35W L60E G83R",3
"lib1","SARS-CoV-2","AAGCAATAGATACTAG",2,40.54,7.84,-2.92,0.16,1.5,1.08,0.01,">1 nonsynonymous","D97I Y119R R127N",3
"lib1","SARS-CoV-2","AAGCAATAGATTGGAG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","G83Y D90*",2
"lib1","SARS-CoV-2","AAGCAATATAATTACC",3,1.14,NA,NA,NA,NA,NA,NA,"stop","G9I W23C A42S K56* D68M Y121Q T170C",7
"lib1","SARS-CoV-2","AAGCAATCCTAATAAC",6,73.04,10.03,-0.73,0.05,2.89,1,0,">1 nonsynonymous","C6M S129K",2
"lib1","SARS-CoV-2","AAGCAATCTAAAACAA",7,73.66,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44N G74S F99L I104D",4
"lib1","SARS-CoV-2","AAGCAATGTTGACCCA",5,146.06,10.16,-0.6,0.05,2.88,1,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","AAGCAATTAATTTAAA",3,20.1,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","S41V G51Q N107I K114E",4
"lib1","SARS-CoV-2","AAGCAATTGATTTATA",2,61.23,6.91,-3.85,0.24,1.5,1.09,0.01,">1 nonsynonymous","S41I S113Q T148F Q163T",4
"lib1","SARS-CoV-2","AAGCAATTGCTATAGA",1,32.83,6.01,-4.75,0.77,1.5,1.12,0.01,">1 nonsynonymous","P7V D59F G83N Y93S G116N Y165V K199L",7
"lib1","SARS-CoV-2","AAGCAATTTATTGGAA",6,113.06,7.24,-3.52,0.16,1.84,1.18,0.01,">1 nonsynonymous","Y39T R78G N120F Y159A",4
"lib1","SARS-CoV-2","AAGCAATTTCTCCGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S W106G F134P",3
"lib1","SARS-CoV-2","AAGCACAAAATATTTA",2,11.22,10.67,-0.09,0.09,2.87,1.12,0,"1 nonsynonymous","S36T",1
"lib1","SARS-CoV-2","AAGCACAACATCCTTA",3,20.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49I C150G",2
"lib1","SARS-CoV-2","AAGCACAACCATATCC",4,25.44,7.41,-3.35,0.28,1.5,1.27,0.03,">1 nonsynonymous","T3L P82S",2
"lib1","SARS-CoV-2","AAGCACAAGAACGGAC",4,53.11,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A22T K94Q T100E",3
"lib1","SARS-CoV-2","AAGCACAAGAAGTCAA",2,63.23,9.55,-1.21,0.1,1.78,1.04,0,">1 nonsynonymous","P7I E135F H189R",3
"lib1","SARS-CoV-2","AAGCACAAGCCGATGA",4,77.19,10.49,-0.27,0.04,2.87,1.05,0,">1 nonsynonymous","A33V L57I T201Q",3
"lib1","SARS-CoV-2","AAGCACAAGCGCCATA",1,12.66,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V11I T140I G172W",3
"lib1","SARS-CoV-2","AAGCACAATAAACCGG",1,50.31,6.31,-4.45,0.48,1.5,1.14,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","AAGCACAATTTACTTT",9,47.53,9.78,-0.99,0.15,1.91,1.06,0.01,">1 nonsynonymous","S45L P96S",2
"lib1","SARS-CoV-2","AAGCACACATTAAAAA",4,36.63,10.17,-0.6,0.1,2.76,1,0,">1 nonsynonymous","A42T Y50H F160W",3
"lib1","SARS-CoV-2","AAGCACACCCTTGAGT",1,60.66,10.7,-0.06,0.04,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGCACAGACTCACTA",2,73.18,10.22,-0.54,0.04,2.89,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","AAGCACAGCCAATAGT",4,0.99,NA,NA,NA,NA,NA,NA,"stop","A18R F47K L95V G101L F134*",5
"lib1","SARS-CoV-2","AAGCACATGGGCGTGA",9,164.42,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F8T Y35S S53G L95M N107M P161T Q176V",7
"lib1","SARS-CoV-2","AAGCACATTCACGTAC",5,23.9,7.97,-2.8,0.4,1.5,1.2,0.05,">1 nonsynonymous","F17S F44K",2
"lib1","SARS-CoV-2","AAGCACATTTTCTTCA",2,7.2,10.8,0.03,0.1,2.82,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGCACCAAAAGATTC",11,4.38,NA,NA,NA,NA,NA,NA,"stop","T55S Q84H D112E N171* V180Q T201S",6
"lib1","SARS-CoV-2","AAGCACCAATACGTCA",1,66.61,10.71,-0.06,0.03,2.96,1,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","AAGCACCAATATATCC",2,19.7,6,-4.76,2,1.63,1.13,0.03,">1 nonsynonymous","N92Q D98I N120S K132Q",4
"lib1","SARS-CoV-2","AAGCACCAGAATATAT",2,43.07,10.38,-0.38,0.05,2.86,1.06,0,">1 nonsynonymous","S139G F156R",2
"lib1","SARS-CoV-2","AAGCACCAGACCGTTC",1,10.87,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N1G E10D G101N P133A Y175K T201M",6
"lib1","SARS-CoV-2","AAGCACCAGCCAGACG",7,103.39,10.69,-0.07,0.07,2.88,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGCACCCCCAATTTA",8,100.01,8.49,-2.27,0.13,2.18,1.09,0.01,">1 nonsynonymous","R25T R73S N120E",3
"lib1","SARS-CoV-2","AAGCACCCGCTAAACG",5,43.16,10.79,0.02,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCACCGTTAAGCGT",9,110.56,10.11,-0.65,0.05,2.62,1.01,0,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","AAGCACGAACAATATA",4,114.47,10.81,0.04,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCACGATTCCAAAC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","Q84* E141V",2
"lib1","SARS-CoV-2","AAGCACGCAGAACACC",3,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R K87I D97R V153M Q176I",5
"lib1","SARS-CoV-2","AAGCACGCCCCGTTGC",2,26.28,6,-4.76,2,3,1.2,0,">1 nonsynonymous","S45F K56S N64W G86S W106V G174K",6
"lib1","SARS-CoV-2","AAGCACGCTCAACACT",8,99.88,10.57,-0.2,0.04,2.96,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AAGCACGCTTCACGGT",8,108.53,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17N C61D K94Q F167L",4
"lib1","SARS-CoV-2","AAGCACGGAAACATTT",5,31.98,10.02,-0.75,0.07,2.81,1.09,0,">1 nonsynonymous","K114R S129V Q168T",3
"lib1","SARS-CoV-2","AAGCACGGATGTCACC",1,6.37,8.43,-2.34,0.33,1.71,1.18,0.05,">1 nonsynonymous","S129M Y165T",2
"lib1","SARS-CoV-2","AAGCACGTAAATCTAT",10,153.43,10.18,-0.59,0.11,2.52,1.04,0.01,"1 nonsynonymous","G83W",1
"lib1","SARS-CoV-2","AAGCACTAAAAGTCTG",1,39.69,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I80W R179Y",2
"lib1","SARS-CoV-2","AAGCACTAGATCCGCA",12,83.8,10.5,-0.26,0.05,2.88,1.06,0,">1 nonsynonymous","I2F T55Y T100S",3
"lib1","SARS-CoV-2","AAGCACTCGATAAAAG",1,0.86,NA,NA,NA,NA,NA,NA,"stop","L5* L95N S139F",3
"lib1","SARS-CoV-2","AAGCACTGAACTGACG",3,40.27,10.74,-0.02,0.06,2.91,1.05,0,">1 nonsynonymous","I2L P197E",2
"lib1","SARS-CoV-2","AAGCACTTGAAGTCAT",3,36.2,10.63,-0.13,0.06,2.9,1.06,0,">1 nonsynonymous","K56M K128T P149N",3
"lib1","SARS-CoV-2","AAGCAGAACACGATAG",6,13.47,8.57,-2.19,0.37,1.5,1.08,0.07,">1 nonsynonymous","F12W D90I I104Y",3
"lib1","SARS-CoV-2","AAGCAGAACATGACAT",4,38.43,9,-1.77,0.12,2.24,1.12,0.01,">1 nonsynonymous","D112L A190H",2
"lib1","SARS-CoV-2","AAGCAGAACTCTAAAC",5,35.18,6,-4.76,1,1.5,1.2,0.01,">1 nonsynonymous","S53T N64Y T148K C158D",4
"lib1","SARS-CoV-2","AAGCAGACACATGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S S53I P96H Q144L P169*",5
"lib1","SARS-CoV-2","AAGCAGACCATACGAG",8,325.96,10.36,-0.41,0.02,2.93,1.02,0,">1 nonsynonymous","V37L P169L",2
"lib1","SARS-CoV-2","AAGCAGAGGCCCTCCC",2,40.87,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K26P V37F P54A F134L G155L",5
"lib1","SARS-CoV-2","AAGCAGCAACACTCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A R127Q",2
"lib1","SARS-CoV-2","AAGCAGCACAAGTCCT",2,9.47,8.99,-1.78,0.23,2.48,1.18,0.03,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","AAGCAGCCAGGACTGT",3,48.22,10.67,-0.1,0.06,2.91,1,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","AAGCAGCCTGTGAGCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A18M S129V L162R",4
"lib1","SARS-CoV-2","AAGCAGCGAATTAAAC",6,0.05,NA,NA,NA,NA,NA,NA,"stop","N4* V11L S19* Y50S N64A N130I S200H",7
"lib1","SARS-CoV-2","AAGCAGCGACATAACT",2,48.65,9.21,-1.56,0.12,2.64,1.13,0.01,">1 nonsynonymous","T63L Q144C",2
"lib1","SARS-CoV-2","AAGCAGCTCAGCAAAT",2,39.56,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6L A81G V103Y S139A",4
"lib1","SARS-CoV-2","AAGCAGCTTAGCATAT",2,11.9,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I88T W106S G117V G152W",4
"lib1","SARS-CoV-2","AAGCAGGAAGTTAAAG",4,51.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18T N30M Y50V V194I",4
"lib1","SARS-CoV-2","AAGCAGGCCTATGCAA",5,2.71,NA,NA,NA,NA,NA,NA,"stop","P7T V65T V77I D90M D98* Y143W",6
"lib1","SARS-CoV-2","AAGCAGGGCCATTAAA",2,40.4,8.86,-1.91,0.37,1.5,1,0.06,">1 nonsynonymous","K48E A81S D97N S139E Q144H P149S",6
"lib1","SARS-CoV-2","AAGCAGGTCTATGATA",5,33.89,6,-4.76,1.76,1.5,1.2,0.02,">1 nonsynonymous","D68R T85G S108T Y165S G174E",5
"lib1","SARS-CoV-2","AAGCAGGTGGTAACCG",4,37.78,10.69,-0.08,0.08,2.91,1,0,"1 nonsynonymous","V37T",1
"lib1","SARS-CoV-2","AAGCAGTAGCACGAAA",9,98.96,10.26,-0.51,0.05,2.85,1.02,0,">1 nonsynonymous","Y35S V77L",2
"lib1","SARS-CoV-2","AAGCAGTATAAAATCT",9,107.25,9.98,-0.78,0.1,1.95,1.05,0,"1 nonsynonymous","P96M",1
"lib1","SARS-CoV-2","AAGCAGTCTTTAATGA",4,53.72,9.75,-1.01,0.12,1.89,1.11,0.01,">1 nonsynonymous","R27W N40V P54E",3
"lib1","SARS-CoV-2","AAGCAGTGCCTAACAA",2,20.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S53K L95Y T148S",3
"lib1","SARS-CoV-2","AAGCAGTTTTAGTTGA",4,17.72,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","K94H F99E A192R",3
"lib1","SARS-CoV-2","AAGCATAAGATCACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* F44D T170P",3
"lib1","SARS-CoV-2","AAGCATAAGTTGTCTG",4,42.9,6,-4.76,0.82,1.5,1.1,0,">1 nonsynonymous","G51T G86R K94P V180M",4
"lib1","SARS-CoV-2","AAGCATAATATGAAAA",4,35.93,6.31,-4.46,0.61,1.5,1.23,0.02,">1 nonsynonymous","L38P Y91W S108T S139A T201W",5
"lib1","SARS-CoV-2","AAGCATAATGAGCAAT",8,61.66,8.2,-2.56,0.25,1.5,1.09,0.03,">1 nonsynonymous","G9A T46P G83A",3
"lib1","SARS-CoV-2","AAGCATACACATATAT",5,12.1,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","F12P S41A K87Q F134R",4
"lib1","SARS-CoV-2","AAGCATACTACCAGGA",1,24,6.63,-4.14,0.47,1.79,1.13,0.02,">1 nonsynonymous","F8T P96K R179G",3
"lib1","SARS-CoV-2","AAGCATACTCACAGGT",1,90.79,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","K56Q P149L N157Y G166D",4
"lib1","SARS-CoV-2","AAGCATAGAATGTAGA",1,13.8,6,-4.76,2,3,1.31,0.05,">1 nonsynonymous","G83F R179F",2
"lib1","SARS-CoV-2","AAGCATAGACGAGGGT",2,16.12,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I72L P96G N118P Y175M",4
"lib1","SARS-CoV-2","AAGCATAGATAACAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","Q168*",1
"lib1","SARS-CoV-2","AAGCATAGGTGAAAAA",6,131.37,10.11,-0.65,0.05,2.94,1,0,"1 nonsynonymous","R73T",1
"lib1","SARS-CoV-2","AAGCATATACAATAGA",6,63.69,10.76,-0.01,0.07,2.87,1.07,0,">1 nonsynonymous","L5W S41T",2
"lib1","SARS-CoV-2","AAGCATATACTATCCT",5,58.96,10.12,-0.65,0.14,2.35,1.03,0.01,">1 nonsynonymous","T55V F134I",2
"lib1","SARS-CoV-2","AAGCATATGCTGACCA",2,25.23,10.58,-0.18,0.03,2.93,1.02,0,">1 nonsynonymous","G83H N171I",2
"lib1","SARS-CoV-2","AAGCATATGTCTCCCT",4,149.86,10.19,-0.58,0.06,2.92,1.01,0,">1 nonsynonymous","L5F K87S N171Q",3
"lib1","SARS-CoV-2","AAGCATATTCATTTGG",5,184.99,9.89,-0.87,0.09,2.03,1.07,0,"1 nonsynonymous","I28Q",1
"lib1","SARS-CoV-2","AAGCATCAATCTGGGA",5,46.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R73V D97Y D112L",3
"lib1","SARS-CoV-2","AAGCATCCCATTGAAG",7,57.91,8.45,-2.32,0.19,1.5,1.15,0.01,">1 nonsynonymous","F12Y S45M T148L T201S",4
"lib1","SARS-CoV-2","AAGCATCGAATAACCA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","N107* T170C",2
"lib1","SARS-CoV-2","AAGCATCGTATCCCAG",3,0.81,NA,NA,NA,NA,NA,NA,"stop","I2L D59* F99I Q168*",4
"lib1","SARS-CoV-2","AAGCATCTAATTTAAC",2,18.44,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N109Q R127P E135F",3
"lib1","SARS-CoV-2","AAGCATCTATGCCGCA",2,22.02,6.2,-4.57,0.62,3,1.11,0.01,">1 nonsynonymous","R25A A33D I88Q",3
"lib1","SARS-CoV-2","AAGCATCTGTTTGATA",1,74.8,10.28,-0.48,0.04,2.79,1.08,0,">1 nonsynonymous","N64A D90V K199S",3
"lib1","SARS-CoV-2","AAGCATGCACACTTTA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","L187E K198*",2
"lib1","SARS-CoV-2","AAGCATGGAGGCACAA",2,99.6,10.8,0.03,0.05,2.96,1.01,0,">1 nonsynonymous","T55Y T201S",2
"lib1","SARS-CoV-2","AAGCATGGCGACATTA",3,18.69,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","I104N N120C Y143F",3
"lib1","SARS-CoV-2","AAGCATGGTAGCAATC",2,46.64,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G101S N120L S129I",3
"lib1","SARS-CoV-2","AAGCATGTAATGTTCG",5,0.29,NA,NA,NA,NA,NA,NA,"stop","L60* R136I F160S T201D",4
"lib1","SARS-CoV-2","AAGCATGTAATTACAA",5,22.39,10.79,0.02,0.08,2.86,1.08,0,">1 nonsynonymous","E141K T201K",2
"lib1","SARS-CoV-2","AAGCATGTCGCTACTA",11,199.64,10.79,0.02,0.07,2.91,1.06,0,"1 nonsynonymous","S200R",1
"lib1","SARS-CoV-2","AAGCATGTCTATTTTT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","V52L K87I F99I L122*",4
"lib1","SARS-CoV-2","AAGCATGTGCGGAGAA",1,13.25,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E76T S113T N120P P133A P149R",5
"lib1","SARS-CoV-2","AAGCATTAAGTCACAC",3,26.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V103P Y121S S184K",3
"lib1","SARS-CoV-2","AAGCATTCAAGCACAT",3,87.83,10.65,-0.11,0.09,2.81,1.12,0,"1 nonsynonymous","K26T",1
"lib1","SARS-CoV-2","AAGCATTGATTTACTA",1,28.33,8.7,-2.06,0.31,1.86,1.3,0.04,">1 nonsynonymous","Y178L P191L",2
"lib1","SARS-CoV-2","AAGCATTGCAGAATCT",8,71.3,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","V11S R25S W106K F134S",4
"lib1","SARS-CoV-2","AAGCATTTCCAATGGA",2,23.47,10.54,-0.22,0.05,2.92,1.01,0,">1 nonsynonymous","R27Q E141L",2
"lib1","SARS-CoV-2","AAGCATTTCGCAAAAC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","C61* G83N N157C",3
"lib1","SARS-CoV-2","AAGCCAAAAAATTAGG",5,61.25,9.69,-1.08,0.12,2.45,1.06,0.01,">1 nonsynonymous","Y35D S41A N58F G174R",4
"lib1","SARS-CoV-2","AAGCCAAATCAATAAT",2,102.51,9.68,-1.08,0.11,2.34,1.06,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","AAGCCAACAACTAACC",3,10.17,6,-4.76,2,3,1.04,0,">1 nonsynonymous","N13R V37G L95V P177K A192S",5
"lib1","SARS-CoV-2","AAGCCAACAACTTGAT",3,0,NA,NA,NA,NA,NA,NA,"stop","N13C S29F K48* G83S T100N N118R V173S",7
"lib1","SARS-CoV-2","AAGCCAACGCAATAAA",4,8.41,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y35R Y91A T100W",3
"lib1","SARS-CoV-2","AAGCCAAGTGATACGG",4,14.17,10.02,-0.74,0.22,2.04,1.04,0.01,">1 nonsynonymous","W106A G116D",2
"lib1","SARS-CoV-2","AAGCCAATAACTTAAT",4,98.9,10.62,-0.14,0.05,2.94,1,0,">1 nonsynonymous","P149R F160C",2
"lib1","SARS-CoV-2","AAGCCAATGAAGTTTA",4,79.41,10.68,-0.09,0.05,2.92,1.05,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AAGCCAATGACGCAAT",5,0.74,NA,NA,NA,NA,NA,NA,"stop","I2* V37L D90L",3
"lib1","SARS-CoV-2","AAGCCAATGGGCGTCT",1,28.11,6,-4.76,2,3,1.06,0,">1 nonsynonymous","P7V A14T T55V Q84E K128S S139F L162I",7
"lib1","SARS-CoV-2","AAGCCACAAGGAGCAC",4,27.46,10.67,-0.1,0.04,2.95,1,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","AAGCCACAATGGGAAT",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52A V71L T85I L131A T148H Q168N",6
"lib1","SARS-CoV-2","AAGCCACACAAAATGG",1,15.65,10.89,0.12,0.08,2.83,1.1,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","AAGCCACAGTAATGGT",2,33.79,10.76,0,0.09,2.9,1.02,0,"1 nonsynonymous","V173Y",1
"lib1","SARS-CoV-2","AAGCCACCTAATTAGT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","V37A E76* T140M S147C",4
"lib1","SARS-CoV-2","AAGCCACGTAATGGTC",5,54.58,8.25,-2.52,0.16,2.24,1.15,0.01,">1 nonsynonymous","L95V I142G",2
"lib1","SARS-CoV-2","AAGCCACTTGAGTAAC",1,38.36,7.23,-3.53,0.48,1.5,1.25,0.07,">1 nonsynonymous","V37A F44Y D59F K128I S147L L183S K199Y",7
"lib1","SARS-CoV-2","AAGCCAGAACCCCACC",5,60.18,8.48,-2.29,0.23,1.5,1.02,0.02,">1 nonsynonymous","D98R R127M",2
"lib1","SARS-CoV-2","AAGCCAGACCAAATTT",4,16.09,10.58,-0.19,0.14,2.69,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCAGAGGACTTAC",9,118.86,10.79,0.02,0.06,2.87,1.05,0,">1 nonsynonymous","K48R V115T",2
"lib1","SARS-CoV-2","AAGCCAGAGTATGACT",1,24.26,10.28,-0.49,0.1,2.73,1.08,0,">1 nonsynonymous","N13L Y35F G51R",3
"lib1","SARS-CoV-2","AAGCCAGATAAGATAA",1,10.88,9.58,-1.18,0.23,2.56,1.36,0.03,">1 nonsynonymous","G9H G155R Q163V",3
"lib1","SARS-CoV-2","AAGCCAGATACAATCC",2,4.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137H",1
"lib1","SARS-CoV-2","AAGCCAGCAGATGATC",6,89.06,10.76,-0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCAGCCAGATCTT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","Y50* C102F N110D",3
"lib1","SARS-CoV-2","AAGCCAGTCGATCTAT",3,18.99,6.77,-3.99,0.45,1.5,1.12,0.04,">1 nonsynonymous","T3Q S19H F62S N151L V181M",5
"lib1","SARS-CoV-2","AAGCCAGTGGGTCCAT",4,119.74,10.78,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","AAGCCAGTGTAAAAAG",8,63.35,8.38,-2.38,0.16,1.5,1.07,0.01,">1 nonsynonymous","C61Y I88L N120F",3
"lib1","SARS-CoV-2","AAGCCATAAGCAACGC",4,79.15,9.76,-1,0.11,2.12,1.02,0.01,">1 nonsynonymous","S36L S69R",2
"lib1","SARS-CoV-2","AAGCCATAATAAGGCC",8,58.88,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Q144C P161F",2
"lib1","SARS-CoV-2","AAGCCATACATGAACA",5,66.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6Y G86C",2
"lib1","SARS-CoV-2","AAGCCATACCGATAGA",3,1,NA,NA,NA,NA,NA,NA,"stop","L5W V11N G83M T201*",4
"lib1","SARS-CoV-2","AAGCCATACCGCATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","AAGCCATAGAACAAGC",3,51.34,10.05,-0.71,0.09,2.6,1.07,0,">1 nonsynonymous","D34H T140V",2
"lib1","SARS-CoV-2","AAGCCATATAAAAAAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","N13I G51* A105H K132D",4
"lib1","SARS-CoV-2","AAGCCATCAACAAGAT",7,145.93,10.73,-0.04,0.07,2.88,1.05,0,"1 nonsynonymous","L162I",1
"lib1","SARS-CoV-2","AAGCCATCGTACAAAT",11,139.73,10.78,0.02,0.06,2.89,1.08,0,">1 nonsynonymous","G9D Q144S P149S",3
"lib1","SARS-CoV-2","AAGCCATGAGATTTTC",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A N92T D97F P149H E154I",5
"lib1","SARS-CoV-2","AAGCCATTAAAAACTA",4,59.88,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V37I N58Q L95Q",3
"lib1","SARS-CoV-2","AAGCCCAACTACAGAG",2,73.2,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A89F L125N N157Y",3
"lib1","SARS-CoV-2","AAGCCCAAGTTTACTA",1,11.61,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5F E10K C61N I88F G146R",5
"lib1","SARS-CoV-2","AAGCCCACCTTAACAG",4,45.77,10.66,-0.1,0.07,2.97,1.01,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","AAGCCCACTCCTAAGC",3,12.88,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V20K D59V N118F E154H",4
"lib1","SARS-CoV-2","AAGCCCAGAAATGTAG",2,52.89,10.71,-0.05,0.05,2.94,1.01,0,">1 nonsynonymous","N24T E154G",2
"lib1","SARS-CoV-2","AAGCCCAGGATAAACA",3,37.86,10.39,-0.37,0.07,2.83,1.14,0,"1 nonsynonymous","N58I",1
"lib1","SARS-CoV-2","AAGCCCATAAAAAATT",1,7.47,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y93K S129N N151H",3
"lib1","SARS-CoV-2","AAGCCCATGAGGTGAC",7,68.11,10.79,0.03,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCCATTAGATCAT",2,33.92,9.26,-1.51,0.16,1.78,1.13,0.01,">1 nonsynonymous","T55Y L131S T201Y",3
"lib1","SARS-CoV-2","AAGCCCCAACAACACA",1,86.29,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","P54D G86R G116D",3
"lib1","SARS-CoV-2","AAGCCCCAATCTGGGT",3,19.29,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3K G9V Y35H Y119S R136I L162M L183P",7
"lib1","SARS-CoV-2","AAGCCCCATCAGACTA",2,22.09,9.36,-1.4,0.11,2.63,1.13,0,">1 nonsynonymous","N24V T85A N130P G146T",4
"lib1","SARS-CoV-2","AAGCCCCCATACGGTA",9,172.14,10.72,-0.04,0.05,2.91,1.04,0,"1 nonsynonymous","L188R",1
"lib1","SARS-CoV-2","AAGCCCCCGTATCTCA",2,101.69,10.69,-0.08,0.06,2.95,1.04,0,">1 nonsynonymous","D98R Y178H",2
"lib1","SARS-CoV-2","AAGCCCCGACCGGGAT",11,0.16,NA,NA,NA,NA,NA,NA,"stop","S41G K56P D98K K132* T148Y",5
"lib1","SARS-CoV-2","AAGCCCGAATCATCTT",8,146.24,10.56,-0.2,0.05,2.9,1.04,0,"1 nonsynonymous","T46A",1
"lib1","SARS-CoV-2","AAGCCCGAGATTACAA",1,5.3,6.3,-4.46,2,1.5,1.04,0.05,">1 nonsynonymous","W106H P177T",2
"lib1","SARS-CoV-2","AAGCCCGCACTCTGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F62C N92A E141* L187P",4
"lib1","SARS-CoV-2","AAGCCCGTGACTATAT",5,124.69,9.56,-1.21,0.09,2.73,1.08,0,">1 nonsynonymous","V115T E141V T170M",3
"lib1","SARS-CoV-2","AAGCCCTTCTAAAGGT",1,25.13,10.32,-0.45,0.06,2.9,1.06,0,">1 nonsynonymous","T55K Q84K Y121L G196R",4
"lib1","SARS-CoV-2","AAGCCCTTTAGCCGTA",1,40.86,10.79,0.03,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCGAAACCCTGCT",1,120.49,10.35,-0.42,0.04,2.89,1.03,0,">1 nonsynonymous","I2E D98G N110S E154N",4
"lib1","SARS-CoV-2","AAGCCGAAACTTCGAG",6,6.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S F44Y V52Y I104S G152K T201Y",6
"lib1","SARS-CoV-2","AAGCCGAAAGATACAA",19,190.51,10.51,-0.25,0.04,2.96,1.01,0,"1 nonsynonymous","S43N",1
"lib1","SARS-CoV-2","AAGCCGAAGTCAAGCT",9,83.52,10.83,0.07,0.09,2.89,1.07,0,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","AAGCCGAATACCAGAA",4,8.42,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","D34P D90P L122R P149K",4
"lib1","SARS-CoV-2","AAGCCGAATCTATACA",14,76.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N1G G83N Y93M G152A V173H",5
"lib1","SARS-CoV-2","AAGCCGACAACTCCAC",7,17.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y D68A N130R G172L G196R",5
"lib1","SARS-CoV-2","AAGCCGATGTAAAAAT",2,91.39,10.54,-0.23,0.06,2.88,1,0,">1 nonsynonymous","D59V T148L",2
"lib1","SARS-CoV-2","AAGCCGCAAGTACCAA",5,23.59,10.43,-0.34,0.07,2.92,1,0,">1 nonsynonymous","C61T A105G",2
"lib1","SARS-CoV-2","AAGCCGCATCACAGCT",8,30.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104D R127S P133E T140S",4
"lib1","SARS-CoV-2","AAGCCGCGAATTATCT",5,29.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6M R25W G51A N107Y",4
"lib1","SARS-CoV-2","AAGCCGCGTACGTAAC",3,46.32,10.75,-0.01,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCGCTGCCTTACG",2,3.63,NA,NA,NA,NA,NA,NA,"stop","K56T G74C I88* P96D L111I",5
"lib1","SARS-CoV-2","AAGCCGGTCTAGTCTC",2,526.22,10.82,0.05,0.06,2.92,1.05,0,">1 nonsynonymous","T100F A190G T201V",3
"lib1","SARS-CoV-2","AAGCCGTAGGTCTTGA",3,0.83,NA,NA,NA,NA,NA,NA,"stop","V37S S108* D137W P149L G166W",5
"lib1","SARS-CoV-2","AAGCCGTTAAAAAATG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","L5* P133N",2
"lib1","SARS-CoV-2","AAGCCTAAAAACTGGC",1,3.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","AAGCCTAAAAGAGGCT",1,45.48,10.65,-0.11,0.1,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCCTAAAATAGCAT",1,23.09,10.29,-0.48,0.1,2.84,1,0.01,">1 nonsynonymous","C49W S129T G146S",3
"lib1","SARS-CoV-2","AAGCCTAAACCCCACG",1,14.81,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","C49V V77H L131S",3
"lib1","SARS-CoV-2","AAGCCTAAGGAGGACT",5,12.91,7.37,-3.39,0.5,1.5,1,0.06,">1 nonsynonymous","T55V C61D G86M R127F E135R",5
"lib1","SARS-CoV-2","AAGCCTACAAGAGCTC",3,11.17,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S53V I88S G174F",3
"lib1","SARS-CoV-2","AAGCCTACCATAGAAT",3,50.24,8.28,-2.48,0.2,2.31,1.18,0.02,">1 nonsynonymous","G51R D97P S113F S147P",4
"lib1","SARS-CoV-2","AAGCCTACCGAACTTA",3,0,NA,NA,NA,NA,NA,NA,"stop","K26L C61* N92G R127S E135R E141N",6
"lib1","SARS-CoV-2","AAGCCTACGCCCCGAA",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K I28V C49Y C102R W106C D112C P149D",7
"lib1","SARS-CoV-2","AAGCCTATACTAGCCA",3,51.13,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14Y C150K P197L",3
"lib1","SARS-CoV-2","AAGCCTATGGCATAGC",5,0.21,NA,NA,NA,NA,NA,NA,"stop","A22K N118F R124T C158H Y175*",5
"lib1","SARS-CoV-2","AAGCCTATTCCGTGCA",5,2.06,NA,NA,NA,NA,NA,NA,"stop","P7* W23* I28Q Y93A F167Y",5
"lib1","SARS-CoV-2","AAGCCTCAAAAAACCA",4,0.33,NA,NA,NA,NA,NA,NA,"stop","F8S S53* L60I S200Q",4
"lib1","SARS-CoV-2","AAGCCTCAATTAAAAC",2,45.35,6.29,-4.47,0.53,1.5,1.14,0.01,">1 nonsynonymous","R73W R127M K198S",3
"lib1","SARS-CoV-2","AAGCCTCATCAAAACG",4,63.01,10.53,-0.24,0.05,2.91,1,0,">1 nonsynonymous","P54N F62L",2
"lib1","SARS-CoV-2","AAGCCTCATTTACATA",2,87.3,10.13,-0.63,0.04,2.84,1.05,0,"1 nonsynonymous","Q79K",1
"lib1","SARS-CoV-2","AAGCCTCCTAGAATGC",3,104.14,8.43,-2.34,0.07,2.43,1.08,0,">1 nonsynonymous","C6Y T170R",2
"lib1","SARS-CoV-2","AAGCCTCGAGCGGATA",5,71.92,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I88L P149F L162S",3
"lib1","SARS-CoV-2","AAGCCTGAGCAAAATA",1,1.43,NA,NA,NA,NA,NA,NA,"stop","S43T R73* Q176S",3
"lib1","SARS-CoV-2","AAGCCTGCGTTAGTTG",2,0.76,NA,NA,NA,NA,NA,NA,"stop","T15L Y35F D97R R127* Q168C L188P K198S",7
"lib1","SARS-CoV-2","AAGCCTGTAACTTCAA",4,60.31,10.53,-0.23,0.08,2.88,1.08,0,">1 nonsynonymous","S36M N171S",2
"lib1","SARS-CoV-2","AAGCCTGTCGTTGACC",4,80.17,8.76,-2.01,0.12,2.77,1.15,0.01,"1 nonsynonymous","N171R",1
"lib1","SARS-CoV-2","AAGCCTGTGTGAATTA",3,37.4,10.62,-0.14,0.05,2.87,1.12,0,">1 nonsynonymous","I2D K198Y",2
"lib1","SARS-CoV-2","AAGCCTTACTCATTGA",5,12.75,6,-4.76,1.2,3,1.23,0.01,">1 nonsynonymous","T15D C49G A145S",3
"lib1","SARS-CoV-2","AAGCCTTCAATCCCCT",1,18.61,9.12,-1.65,0.24,1.93,1.01,0.02,">1 nonsynonymous","Y35G Q144C",2
"lib1","SARS-CoV-2","AAGCCTTGACATGTGG",2,6.39,10.2,-0.56,0.1,2.86,1,0.01,">1 nonsynonymous","K48W T201Q",2
"lib1","SARS-CoV-2","AAGCCTTGGAAGTCAA",8,20.65,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib1","SARS-CoV-2","AAGCCTTTAGAATTTT",11,464.26,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K56I Y119L R136P",3
"lib1","SARS-CoV-2","AAGCCTTTTTGAGAAA",5,55.65,10.69,-0.07,0.1,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCGAAAAAACAAGA",2,28.13,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D112N N120F K128F",3
"lib1","SARS-CoV-2","AAGCGAAAAATTTGCT",1,18.41,8.59,-2.17,0.27,1.97,1.14,0.02,">1 nonsynonymous","P7S S113F",2
"lib1","SARS-CoV-2","AAGCGAAAAGCGAATG",12,3.24,NA,NA,NA,NA,NA,NA,"stop","N151*",1
"lib1","SARS-CoV-2","AAGCGAAAATCATAGG",5,35.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R Y165M",2
"lib1","SARS-CoV-2","AAGCGAAAGGGGAGCC",3,9.24,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C102D W106R C158S",3
"lib1","SARS-CoV-2","AAGCGAACAATTGTGG",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90W W106E",2
"lib1","SARS-CoV-2","AAGCGAAGAATATCCA",7,130.39,10.13,-0.63,0.07,2.6,1.03,0,"1 nonsynonymous","T15W",1
"lib1","SARS-CoV-2","AAGCGAAGTAAAAAGC",9,35.3,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F70E D90M",2
"lib1","SARS-CoV-2","AAGCGAAGTCTAAAAA",3,33.99,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D97Y R124C",2
"lib1","SARS-CoV-2","AAGCGAATAAGTCTTT",2,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19N K87D Y123L D137T F156P Y178R L183Q",7
"lib1","SARS-CoV-2","AAGCGAATATTAGTCA",5,45.22,10.33,-0.44,0.07,2.94,1.03,0,">1 nonsynonymous","C61T A89P",2
"lib1","SARS-CoV-2","AAGCGAATGGCAAGAG",3,96.01,10.81,0.04,0.04,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGCGACAAGACTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* N40I T63I D68A T100K V173F",6
"lib1","SARS-CoV-2","AAGCGACATATCTAAG",1,9.02,10.65,-0.12,0.04,3,1,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","AAGCGACCGAGTGATC",11,180.71,9.97,-0.8,0.11,2.35,1.02,0,">1 nonsynonymous","F47S N64T",2
"lib1","SARS-CoV-2","AAGCGACGCCACTAGA",12,198.49,9.07,-1.7,0.15,1.52,1.1,0.01,">1 nonsynonymous","A33R T46N T55D L122V K128L",5
"lib1","SARS-CoV-2","AAGCGACTCAAGACAT",2,29.15,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T15Y D98I L122D F167S",4
"lib1","SARS-CoV-2","AAGCGACTTTGAAACT",1,41.47,8.73,-2.03,0.14,1.8,1.15,0.01,">1 nonsynonymous","F17L L60S S147R",3
"lib1","SARS-CoV-2","AAGCGAGCAAGCAGCA",1,21.26,10.54,-0.22,0.07,2.93,1.04,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","AAGCGAGGCCTGTAAA",5,32.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44A L122R F134S G172V",4
"lib1","SARS-CoV-2","AAGCGAGTTAACAGAA",5,33.52,10.23,-0.53,0.07,2.74,1.01,0,">1 nonsynonymous","I2T S41P G51N N120I",4
"lib1","SARS-CoV-2","AAGCGATAAATTCGTT",3,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F G9V",2
"lib1","SARS-CoV-2","AAGCGATACCTTAACC",8,93.42,9.36,-1.41,0.11,1.8,1.11,0,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","AAGCGATATAAAGTAT",2,16.48,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C102G P161S",2
"lib1","SARS-CoV-2","AAGCGATGGGGAAAAA",1,9.86,9.33,-1.43,0.29,2.39,1.15,0.05,">1 nonsynonymous","G9L D97R I138R",3
"lib1","SARS-CoV-2","AAGCGATGTGAGCGGA",1,30.17,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I104T C150P",2
"lib1","SARS-CoV-2","AAGCGATTAAAAAAGT",4,88.67,8.86,-1.91,0.09,2.21,1.15,0,">1 nonsynonymous","I28L N58L N107E",3
"lib1","SARS-CoV-2","AAGCGATTTACCCTGT",5,22.98,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59H N120A L131K",3
"lib1","SARS-CoV-2","AAGCGATTTTTCTGGG",8,89.45,9.68,-1.08,0.11,1.93,1.08,0,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","AAGCGCAACTGCGAGC",1,0.86,NA,NA,NA,NA,NA,NA,"stop","K56* N107E D112T R127H",4
"lib1","SARS-CoV-2","AAGCGCAAGACGCGGT",1,5.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K56G V77G",2
"lib1","SARS-CoV-2","AAGCGCAAGACTTTAA",6,31.07,7.43,-3.34,0.38,1.5,1.08,0.04,">1 nonsynonymous","V11S T85Y G116A I142L Q163K",5
"lib1","SARS-CoV-2","AAGCGCAATTACGGCA",2,13.47,8.41,-2.35,0.32,1.61,1.2,0.06,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","AAGCGCAGCACCATAA",2,13.68,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77T T100L Y123V N130M G166K S200V",6
"lib1","SARS-CoV-2","AAGCGCAGGGACCTAG",3,40.06,10.51,-0.25,0.09,2.92,1,0,"1 nonsynonymous","N13S",1
"lib1","SARS-CoV-2","AAGCGCCAACGGCAAA",4,45.76,9.88,-0.89,0.07,2.1,1.04,0,">1 nonsynonymous","C102I K128C T201W",3
"lib1","SARS-CoV-2","AAGCGCCAAGACCAAC",2,7.85,10.47,-0.29,0.28,2.85,1.08,0.01,">1 nonsynonymous","N58K I80V F160M",3
"lib1","SARS-CoV-2","AAGCGCCACATAATTA",4,6.55,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6H A14Q V37T D68R D97L",5
"lib1","SARS-CoV-2","AAGCGCCACATAGTAG",3,24.54,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D34R N92I S129R",3
"lib1","SARS-CoV-2","AAGCGCCATGGCTCAC",1,12.66,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","G83D Y143S F160P",3
"lib1","SARS-CoV-2","AAGCGCCCAGGCCTCC",6,41.19,10.79,0.03,0.07,2.95,1.05,0,"1 nonsynonymous","V115Q",1
"lib1","SARS-CoV-2","AAGCGCCCCCAAATCA",1,14.35,10.8,0.04,0.07,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCGCCTACATGTAC",6,59.9,6.03,-4.73,0.42,1.5,1.16,0,">1 nonsynonymous","Y39L L60W D97T S108M N157D",5
"lib1","SARS-CoV-2","AAGCGCCTCTATAGAA",5,0.25,NA,NA,NA,NA,NA,NA,"stop","V103L S200*",2
"lib1","SARS-CoV-2","AAGCGCGAATGACTTT",7,22.89,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","P7R N64T G86E S139T C158S",5
"lib1","SARS-CoV-2","AAGCGCGCATGACCCT",5,0.69,NA,NA,NA,NA,NA,NA,"stop","L57I L95Y K114* G146L V173L",5
"lib1","SARS-CoV-2","AAGCGCGCCAAAGACG",8,7.69,NA,NA,NA,NA,NA,NA,"stop","G117* T140F",2
"lib1","SARS-CoV-2","AAGCGCGGAGTACAGT",4,128.88,10.65,-0.12,0.05,2.87,1.07,0,">1 nonsynonymous","A42D D98S",2
"lib1","SARS-CoV-2","AAGCGCGTGGCAAAAA",13,170.65,10.45,-0.32,0.04,2.91,1.02,0,">1 nonsynonymous","S45R T100M",2
"lib1","SARS-CoV-2","AAGCGCTCTCAGGATG",1,19.52,9.11,-1.65,0.14,2.19,1.06,0.01,">1 nonsynonymous","C6L T55L G155R",3
"lib1","SARS-CoV-2","AAGCGCTCTGGGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* K128P E186S",3
"lib1","SARS-CoV-2","AAGCGCTGACAAAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","V11M S36* G74M E135K C158S",5
"lib1","SARS-CoV-2","AAGCGCTGGCAATTTG",1,17.58,10.65,-0.12,0.08,2.88,1.07,0,">1 nonsynonymous","R27S S200I",2
"lib1","SARS-CoV-2","AAGCGCTTTATTCTAC",3,33.24,6.74,-4.03,0.29,1.5,1.11,0.02,">1 nonsynonymous","L38D D75S D90G",3
"lib1","SARS-CoV-2","AAGCGCTTTGGACACG",4,47.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N58D K94F G117Y T170S",4
"lib1","SARS-CoV-2","AAGCGGAATAAAATCA",1,15.21,6,-4.76,2,3,1.07,0,">1 nonsynonymous","A18E S69L L95T",3
"lib1","SARS-CoV-2","AAGCGGACTCACCTGT",10,62.26,6.53,-4.23,0.49,1.5,1.12,0.03,">1 nonsynonymous","P7F D98H W106S F160W",4
"lib1","SARS-CoV-2","AAGCGGACTTATAAGA",4,2.19,NA,NA,NA,NA,NA,NA,"stop","N4M I88M K94* Y119C",4
"lib1","SARS-CoV-2","AAGCGGAGATGAAAAC",10,27.07,6,-4.76,2,3,1.07,0,">1 nonsynonymous","D90E P96L F99T K114E E141N",5
"lib1","SARS-CoV-2","AAGCGGATACCGCCAA",6,62.58,9.9,-0.87,0.07,2.7,1.02,0,">1 nonsynonymous","S19P V52Q N120D",3
"lib1","SARS-CoV-2","AAGCGGCCATACAGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C31M L122T K132R E141* K199S",5
"lib1","SARS-CoV-2","AAGCGGCCATGAGAAA",1,27.43,10.76,-0.01,0.1,2.89,1.08,0,"1 nonsynonymous","N64S",1
"lib1","SARS-CoV-2","AAGCGGCTAGAGCAAA",3,45.41,10.33,-0.44,0.09,2.95,1,0,">1 nonsynonymous","V32E L125W",2
"lib1","SARS-CoV-2","AAGCGGCTCAATTAGG",2,111.92,8.24,-2.53,0.15,2.38,1.08,0.01,">1 nonsynonymous","N4S A42F F126K A145F P197L",5
"lib1","SARS-CoV-2","AAGCGGGCGACATCCA",5,76.61,10.18,-0.59,0.19,1.78,1.02,0.02,">1 nonsynonymous","T15Y S19N P161L",3
"lib1","SARS-CoV-2","AAGCGGGTCCTTACTG",5,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C F44A Y91G N120R",4
"lib1","SARS-CoV-2","AAGCGGGTCTTAGGTA",5,77.28,9.12,-1.64,0.07,2.74,1.11,0,">1 nonsynonymous","Y119S L183F",2
"lib1","SARS-CoV-2","AAGCGGTGCCCTGCTT",5,0.45,NA,NA,NA,NA,NA,NA,"stop","A81P G116Y N130S N151* F160C",5
"lib1","SARS-CoV-2","AAGCGGTTATGACTAC",6,139.27,8.7,-2.07,0.1,2.83,1.07,0,">1 nonsynonymous","S43P Y143Q",2
"lib1","SARS-CoV-2","AAGCGTAATTAACGAT",1,5.2,6,-4.76,2,3,1.27,0.03,">1 nonsynonymous","S45T D112L N118Y F134T E141R Y165S T201I",7
"lib1","SARS-CoV-2","AAGCGTACAATTAAAA",7,34.91,10.76,-0.01,0.1,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCGTACAGCGATGT",3,20.8,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V11E Y91C Y143D",3
"lib1","SARS-CoV-2","AAGCGTACCGTGGAAA",4,29.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11C D68N Y119A Y143F",4
"lib1","SARS-CoV-2","AAGCGTACTCCATTAC",4,5.09,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","E10A D59L T63E K87S S139V Y165I",6
"lib1","SARS-CoV-2","AAGCGTACTTGGAGGC",1,92.8,10.73,-0.03,0.04,2.94,1.02,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","AAGCGTAGCTTGGCGC",1,6.53,6,-4.76,2,1.5,1.11,0.06,">1 nonsynonymous","V11C G51N G74C I88Y N120L",5
"lib1","SARS-CoV-2","AAGCGTATTAGAAAAG",4,139.04,10.16,-0.6,0.07,2.76,1.03,0,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","AAGCGTCCGCGCCCGG",3,38.51,10.43,-0.33,0.06,2.92,1,0,">1 nonsynonymous","I28W K56S Q144I",3
"lib1","SARS-CoV-2","AAGCGTCCTATCAACT",6,113.95,9.76,-1,0.09,2.07,1.07,0,">1 nonsynonymous","G9M W106T",2
"lib1","SARS-CoV-2","AAGCGTGACATCTGAA",5,1.78,NA,NA,NA,NA,NA,NA,"stop","W23* D59S D90P",3
"lib1","SARS-CoV-2","AAGCGTTACTCAAATA",3,56.67,8.52,-2.24,0.18,1.73,1.15,0.01,">1 nonsynonymous","A18T V115F D137S F156P",4
"lib1","SARS-CoV-2","AAGCGTTCAATGATCA",2,80.48,10.28,-0.48,0.04,2.94,1.01,0,">1 nonsynonymous","K87M T100W",2
"lib1","SARS-CoV-2","AAGCGTTGCTAGACAT",4,87.47,10.43,-0.34,0.05,2.86,1,0,"1 nonsynonymous","D34S",1
"lib1","SARS-CoV-2","AAGCGTTTAAACTATT",6,135.94,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6S K87N A145N",3
"lib1","SARS-CoV-2","AAGCGTTTACTATACG",3,1.07,NA,NA,NA,NA,NA,NA,"stop","A18C W23* C102F D112Y E141H Q176P K199D",7
"lib1","SARS-CoV-2","AAGCGTTTGGTCAGAA",12,106.85,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A18C L131E F156V",3
"lib1","SARS-CoV-2","AAGCTAAAAAACTACT",3,17.27,10.35,-0.41,0.06,2.92,1.05,0,"1 nonsynonymous","N24I",1
"lib1","SARS-CoV-2","AAGCTAAAACCAATCA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S N40H K94L Q163L",4
"lib1","SARS-CoV-2","AAGCTAAAACTACAAA",1,23.66,10.65,-0.12,0.14,2.81,1,0,">1 nonsynonymous","A18K A33F Y119I",3
"lib1","SARS-CoV-2","AAGCTAAAATAAATTA",1,38.31,9.87,-0.89,0.12,1.98,1.08,0.01,">1 nonsynonymous","L38P C61A Y143F",3
"lib1","SARS-CoV-2","AAGCTAAACAACTAGC",6,152.97,10.19,-0.57,0.05,2.79,1,0,">1 nonsynonymous","Y50F D90C",2
"lib1","SARS-CoV-2","AAGCTAAATTCTAACG",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80R Q163G T201W",3
"lib1","SARS-CoV-2","AAGCTAAGAAACAATG",4,63.07,10.05,-0.71,0.08,2.64,1.06,0,">1 nonsynonymous","L60Y K94V",2
"lib1","SARS-CoV-2","AAGCTAAGCGATGGCA",6,0.65,NA,NA,NA,NA,NA,NA,"stop","K56C Y93K D112* R127K N151T",5
"lib1","SARS-CoV-2","AAGCTAAGGACTTAAA",2,17.71,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","AAGCTAAGTTGTGCTG",2,6.53,9.96,-0.8,0.16,2.68,1.02,0.01,">1 nonsynonymous","A89C D97I",2
"lib1","SARS-CoV-2","AAGCTAATAACCGAAC",11,62.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50H V115M P161G",3
"lib1","SARS-CoV-2","AAGCTAATACCTTGTG",7,62.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D112Y Q168L",2
"lib1","SARS-CoV-2","AAGCTAATTAGACAAA",4,49.81,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I138S C150F",2
"lib1","SARS-CoV-2","AAGCTAATTAGAGAGG",3,50.94,9.24,-1.52,0.26,1.68,1.25,0.03,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","AAGCTAATTATACGAA",7,73.68,9.94,-0.83,0.06,2.64,1.06,0,">1 nonsynonymous","N58I K128L",2
"lib1","SARS-CoV-2","AAGCTACAAAAAAGTA",4,47.32,10.45,-0.31,0.07,2.76,1,0,">1 nonsynonymous","G83W K132L S164R",3
"lib1","SARS-CoV-2","AAGCTACACCTAGGTG",1,54.18,9.63,-1.14,0.12,2.03,1.06,0.01,"1 nonsynonymous","G86N",1
"lib1","SARS-CoV-2","AAGCTACATGGGGAGT",2,12.86,10.02,-0.74,0.16,2.42,1.1,0.01,">1 nonsynonymous","S36C N120G G155A",3
"lib1","SARS-CoV-2","AAGCTACATTAAACTA",6,3.43,NA,NA,NA,NA,NA,NA,"stop","I2T W23* D59L D97L V103A R179L",6
"lib1","SARS-CoV-2","AAGCTACCAAACCGGC",3,10.51,9.53,-1.23,0.24,1.85,1.28,0.03,">1 nonsynonymous","C6P Y39N",2
"lib1","SARS-CoV-2","AAGCTACCACTTTATA",7,36.4,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F62R P82V Y91N P96K E154R",5
"lib1","SARS-CoV-2","AAGCTACGCATTATAA",3,97.46,6.76,-4,0.24,1.5,1.14,0.01,">1 nonsynonymous","P7Q C150P",2
"lib1","SARS-CoV-2","AAGCTACTAAATACTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39I N120G D137I G146L",4
"lib1","SARS-CoV-2","AAGCTACTACCAATAT",5,43,6,-4.76,1.83,1.5,1.21,0.04,">1 nonsynonymous","D34A K94D",2
"lib1","SARS-CoV-2","AAGCTACTTTGAATAT",1,1.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182A",1
"lib1","SARS-CoV-2","AAGCTAGAAGTCCATG",5,37.01,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G83N V103A L162K",3
"lib1","SARS-CoV-2","AAGCTAGACATAACAC",2,11.47,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14I F44M G86S L95S N151E",5
"lib1","SARS-CoV-2","AAGCTAGATGACACAA",3,38.01,10.19,-0.58,0.07,2.82,1.02,0,">1 nonsynonymous","I104V P169M A192H",3
"lib1","SARS-CoV-2","AAGCTAGCCTTATCCT",1,6.86,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","Q144H R179F",2
"lib1","SARS-CoV-2","AAGCTAGGACAAGACC",1,0.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","AAGCTAGTTTACCAAG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","S29T V37R N58I F99* L122S S129D A192H",7
"lib1","SARS-CoV-2","AAGCTATAAAGCACCA",7,70.99,6.07,-4.69,1.03,1.5,1.25,0.03,">1 nonsynonymous","L38K N107A P169F",3
"lib1","SARS-CoV-2","AAGCTATCAAAGTTAA",2,76.56,7.41,-3.35,0.28,1.5,1.12,0.02,">1 nonsynonymous","N107T L122V G152H",3
"lib1","SARS-CoV-2","AAGCTATCATTTGAAA",5,96.09,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D97S P149T F156K Y165S",4
"lib1","SARS-CoV-2","AAGCTATCTGAGGCGG",6,138.24,7.71,-3.05,0.23,1.5,1.09,0.02,">1 nonsynonymous","N171K E186W",2
"lib1","SARS-CoV-2","AAGCTATGTTTACATA",2,23.5,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","I28P W106S",2
"lib1","SARS-CoV-2","AAGCTATTCGAGAGGC",5,94.26,7.44,-3.32,0.18,1.58,1.15,0.01,">1 nonsynonymous","V37M R179Q",2
"lib1","SARS-CoV-2","AAGCTATTCGTTAAAA",1,22.34,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","F12T S45K C61N G101V E135Y K198M",6
"lib1","SARS-CoV-2","AAGCTCAAACGGATAG",3,30.81,6.12,-4.64,0.46,1.5,1.1,0.02,">1 nonsynonymous","V71R V77W",2
"lib1","SARS-CoV-2","AAGCTCAAAGAGACGC",4,61.26,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50P R73V P149M",3
"lib1","SARS-CoV-2","AAGCTCAAATAAGGAA",8,119.06,10.3,-0.46,0.04,2.93,1.02,0,">1 nonsynonymous","V37M F156L",2
"lib1","SARS-CoV-2","AAGCTCAAATTTAACT",4,68.79,10.19,-0.57,0.05,2.74,1.02,0,">1 nonsynonymous","S45F N130S",2
"lib1","SARS-CoV-2","AAGCTCAACCTGTCAA",4,40.01,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","G51Q R73Y A81E",3
"lib1","SARS-CoV-2","AAGCTCACAAAAATAA",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W I28R T100P",3
"lib1","SARS-CoV-2","AAGCTCACAGAAACTC",7,4.06,NA,NA,NA,NA,NA,NA,"stop","R73Y G117D G155V V180*",4
"lib1","SARS-CoV-2","AAGCTCACCTAAACTA",10,95.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14N Y35P K48P K56R D90N",5
"lib1","SARS-CoV-2","AAGCTCACTTTTACGG",1,1.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","AAGCTCAGCCCCTCAG",2,6.39,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","E10Q L95Y P133L",3
"lib1","SARS-CoV-2","AAGCTCAGTATTAGCT",5,33.3,6.02,-4.75,0.66,1.5,1.12,0.01,">1 nonsynonymous","T3W Y39P T55Y P96Y K114R",5
"lib1","SARS-CoV-2","AAGCTCATAATGTATA",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152S K198T",2
"lib1","SARS-CoV-2","AAGCTCATAGCTGTAT",2,45.48,10.89,0.12,0.07,2.96,1.02,0,">1 nonsynonymous","Y39L S113A",2
"lib1","SARS-CoV-2","AAGCTCCATATTAAAG",1,0.88,NA,NA,NA,NA,NA,NA,"stop","Y35Q Y50Q K94R V103* V153F P161Q",6
"lib1","SARS-CoV-2","AAGCTCCCACTATGAT",5,32.28,9.7,-1.06,0.16,1.96,1.09,0.01,">1 nonsynonymous","V11N N64T",2
"lib1","SARS-CoV-2","AAGCTCCGGAAGCAGG",3,39.98,9.94,-0.83,0.08,2.84,1,0,">1 nonsynonymous","K87P E141R S164V",3
"lib1","SARS-CoV-2","AAGCTCCTAATGATAA",1,13.37,8.93,-1.83,0.29,2.47,1.18,0.03,"1 nonsynonymous","N157S",1
"lib1","SARS-CoV-2","AAGCTCCTACTTTTTA",5,84.87,8.96,-1.8,0.07,2.73,1.1,0,">1 nonsynonymous","P54H G117R F134G",3
"lib1","SARS-CoV-2","AAGCTCCTCTAAACTG",5,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L S69L Y91V I138V V173P F185R",6
"lib1","SARS-CoV-2","AAGCTCCTGCACGCAT",3,32.28,9.2,-1.57,0.19,1.7,1.16,0.01,">1 nonsynonymous","P96M G196S",2
"lib1","SARS-CoV-2","AAGCTCGCTCGAGAGG",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E V71C G101D W106I K114E Y119S",6
"lib1","SARS-CoV-2","AAGCTCGCTGATAGAA",1,63.78,6,-4.76,1.1,1.5,1.2,0.01,">1 nonsynonymous","A81D G86F K114D L125C",4
"lib1","SARS-CoV-2","AAGCTCGGGAATGCAC",1,16.93,10.69,-0.07,0.1,2.9,1.04,0.01,"1 nonsynonymous","D97C",1
"lib1","SARS-CoV-2","AAGCTCGGGTTAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S29W Y123I A145L S200*",4
"lib1","SARS-CoV-2","AAGCTCGTAATGATAC",3,7.97,8.92,-1.84,0.2,2.26,1.2,0.01,"1 nonsynonymous","N107V",1
"lib1","SARS-CoV-2","AAGCTCTAATAGTCGG",3,28.06,10.56,-0.2,0.07,3,1.02,0,">1 nonsynonymous","E10A K48R G83F S200I",4
"lib1","SARS-CoV-2","AAGCTCTATATACGCT",3,33.59,10.77,0.01,0.11,2.94,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGCTCTGTAAGCAGT",1,48.08,9.81,-0.95,0.06,2.84,1.04,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","AAGCTCTGTTTGTGGC",5,164.3,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45L S129E I138F P177T",4
"lib1","SARS-CoV-2","AAGCTGAACCTGCATG",10,132.78,8.42,-2.35,0.1,2.75,1.07,0,">1 nonsynonymous","D97T Y175S K199M",3
"lib1","SARS-CoV-2","AAGCTGACAGAAATTG",6,24.13,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G9A K26V T55C L60H D68P A192T",6
"lib1","SARS-CoV-2","AAGCTGACGGGGAAAG",1,23.25,9.37,-1.39,0.11,1.83,1.07,0.01,">1 nonsynonymous","N24H N40M R136N",3
"lib1","SARS-CoV-2","AAGCTGATAAGATCGA",2,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A G83E C102L",3
"lib1","SARS-CoV-2","AAGCTGATTAAAACCA",1,30.85,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","N4L S113W Y175R",3
"lib1","SARS-CoV-2","AAGCTGATTGGCAGGG",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99G G152S",2
"lib1","SARS-CoV-2","AAGCTGCACCCGTCTG",5,11.17,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","N13Y D98Q N120K R136L G174S",5
"lib1","SARS-CoV-2","AAGCTGCGAAAGTTTA",1,28.84,10.71,-0.06,0.07,2.77,1.19,0,">1 nonsynonymous","V32F N110K",2
"lib1","SARS-CoV-2","AAGCTGCGTGCCTAGT",1,13.38,10.16,-0.6,0.14,2.02,1.1,0.01,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","AAGCTGCTAAATATAC",2,59.41,10.74,-0.03,0.07,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGCTGCTAGAACGGT",2,66.71,8.64,-2.12,0.19,1.5,1.08,0.01,">1 nonsynonymous","V103C T140S T201H",3
"lib1","SARS-CoV-2","AAGCTGGAAATTTCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","V37* D97T",2
"lib1","SARS-CoV-2","AAGCTGGAGTTCGATT",5,0.68,NA,NA,NA,NA,NA,NA,"stop","V32* A105C G146L",3
"lib1","SARS-CoV-2","AAGCTGGGGAAACCAA",3,66.1,9.93,-0.83,0.12,2.58,1.1,0.01,">1 nonsynonymous","T100N S164I",2
"lib1","SARS-CoV-2","AAGCTGGTACCCAAAC",2,57.7,10.43,-0.33,0.07,2.88,1.04,0,">1 nonsynonymous","F12V T100M",2
"lib1","SARS-CoV-2","AAGCTGTAAGGAACAG",1,15.09,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F17K F156I",2
"lib1","SARS-CoV-2","AAGCTGTGGTAATACC",4,76.26,10.83,0.06,0.09,2.97,1.02,0,"1 nonsynonymous","I138T",1
"lib1","SARS-CoV-2","AAGCTGTTAAAACAAG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17P K87T",2
"lib1","SARS-CoV-2","AAGCTGTTAACCATAT",1,5.89,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L95D L122C",2
"lib1","SARS-CoV-2","AAGCTGTTACACTAAT",5,25.72,6.07,-4.7,0.49,3,1.27,0.01,">1 nonsynonymous","F12C D90L F99V",3
"lib1","SARS-CoV-2","AAGCTGTTATACTTGT",2,56.66,10.61,-0.15,0.05,2.96,1,0,"1 nonsynonymous","S184R",1
"lib1","SARS-CoV-2","AAGCTGTTTGGAAGGG",4,45.18,10.68,-0.09,0.07,2.93,1.02,0,">1 nonsynonymous","E10A K26L",2
"lib1","SARS-CoV-2","AAGCTTAAATACTAAA",3,1356.63,9.75,-1.02,0.09,2.08,1.05,0,">1 nonsynonymous","A22Q Y91V",2
"lib1","SARS-CoV-2","AAGCTTAACGTGGCAG",5,19.55,7.47,-3.29,0.35,1.5,1.1,0.05,">1 nonsynonymous","A42W E76A I142N V173L",4
"lib1","SARS-CoV-2","AAGCTTACGATGATAA",3,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L N24D K56C I72L Q163P",5
"lib1","SARS-CoV-2","AAGCTTAGAAACAATA",13,286.68,10.14,-0.63,0.06,2.5,1.03,0,">1 nonsynonymous","A14D S129C",2
"lib1","SARS-CoV-2","AAGCTTAGAGGACAAT",4,28.79,8.26,-2.51,0.35,1.5,1.19,0.04,">1 nonsynonymous","F47R Q84W",2
"lib1","SARS-CoV-2","AAGCTTAGTTTAGACC",5,104.57,10.46,-0.3,0.05,2.9,1.04,0,">1 nonsynonymous","C61M S129I",2
"lib1","SARS-CoV-2","AAGCTTATAACCAAAC",5,68.75,8.3,-2.46,0.16,2.44,1.11,0.01,">1 nonsynonymous","L5S S113Q F156L",3
"lib1","SARS-CoV-2","AAGCTTATCTTAGATA",10,66.57,6,-4.76,2,3,1.17,0,">1 nonsynonymous","I80W L125G S129M",3
"lib1","SARS-CoV-2","AAGCTTATCTTAGGTG",7,42.18,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I104T C158V V173D",3
"lib1","SARS-CoV-2","AAGCTTCATAAAGACA",2,8.15,9.65,-1.12,0.31,2.62,1.05,0.05,">1 nonsynonymous","A33D V71R A81K",3
"lib1","SARS-CoV-2","AAGCTTCGAAATACCG",2,127.86,10.14,-0.63,0.05,2.79,1,0,">1 nonsynonymous","Y35G N151Y K199I",3
"lib1","SARS-CoV-2","AAGCTTCGCATACGGA",1,61.44,10.05,-0.72,0.07,2.91,1.04,0,">1 nonsynonymous","P149Q T170M",2
"lib1","SARS-CoV-2","AAGCTTCGCTCGCACC",8,2.88,NA,NA,NA,NA,NA,NA,"stop","N1* I88S D98M Y119E S139G",5
"lib1","SARS-CoV-2","AAGCTTCTTCCGGTAA",7,58.65,10.68,-0.08,0.06,2.87,1.11,0,"1 nonsynonymous","K114R",1
"lib1","SARS-CoV-2","AAGCTTCTTCTAAACC",1,36.56,10.75,-0.01,0.06,2.99,1,0,">1 nonsynonymous","L5Q S41V",2
"lib1","SARS-CoV-2","AAGCTTCTTTGTGCTA",2,3.48,NA,NA,NA,NA,NA,NA,"stop","W23M L60* D68K S113R",4
"lib1","SARS-CoV-2","AAGCTTGAACCTTATT",2,5.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","AAGCTTGCGATTGCAC",1,14.47,9.43,-1.33,0.24,1.78,1.07,0.03,">1 nonsynonymous","K26V N120M P133L",3
"lib1","SARS-CoV-2","AAGCTTGCTAATGCAA",8,0.5,NA,NA,NA,NA,NA,NA,"stop","L60* A67C D98Y N118Y G152S",5
"lib1","SARS-CoV-2","AAGCTTGGTTAAAGAT",1,2.29,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","AAGCTTTAACTTTGCG",7,76.11,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V32R D112N Y165S",3
"lib1","SARS-CoV-2","AAGCTTTAGGCGAAAT",2,55.04,9.89,-0.87,0.1,2.67,1.03,0,">1 nonsynonymous","T3V A33I K48A P169Q",4
"lib1","SARS-CoV-2","AAGCTTTAGGGGGAAT",2,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70H I80V N109L C158S",4
"lib1","SARS-CoV-2","AAGCTTTATATCGGCC",10,214.48,9.35,-1.42,0.05,2.81,1.09,0,">1 nonsynonymous","S41L S139T N171L",3
"lib1","SARS-CoV-2","AAGGAAAAAATGAAAT",5,85.87,6.98,-3.78,0.31,1.5,1.19,0.02,">1 nonsynonymous","I2V V37G P82N",3
"lib1","SARS-CoV-2","AAGGAAAAACTACAAT",4,53.68,10.83,0.06,0.07,2.96,1.04,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","AAGGAAAAAGCTCTGT",4,30.93,6.86,-3.91,0.53,1.5,1.22,0.04,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","AAGGAAAAATCGCCTA",9,66.96,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","F8K S19V F70T D97S",4
"lib1","SARS-CoV-2","AAGGAAAACAGTATTT",2,14.55,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","W23I G152V Q168K",3
"lib1","SARS-CoV-2","AAGGAAAACCAACAAT",1,9.01,10.55,-0.21,0.14,2.81,1.15,0.01,">1 nonsynonymous","S41W N151R",2
"lib1","SARS-CoV-2","AAGGAAAACCCGACAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D34M A105* S113R Y159S",4
"lib1","SARS-CoV-2","AAGGAAAACGACACGG",4,0.85,NA,NA,NA,NA,NA,NA,"stop","P96S S113*",2
"lib1","SARS-CoV-2","AAGGAAAAGCTCGATG",1,46.36,9.83,-0.94,0.07,2.93,1.04,0,">1 nonsynonymous","G155R G174R",2
"lib1","SARS-CoV-2","AAGGAAAAGGCCCTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K S41C T201P",3
"lib1","SARS-CoV-2","AAGGAAAAGTTCAATT",3,36.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R V20L L95H G117L T148F T201Q",6
"lib1","SARS-CoV-2","AAGGAAAATATCAATT",1,20.54,8.2,-2.57,0.32,1.5,1.06,0.04,">1 nonsynonymous","V11K S129R E135V",3
"lib1","SARS-CoV-2","AAGGAAAATTTGCGAA",7,52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I80R Q163G T201W",3
"lib1","SARS-CoV-2","AAGGAAACAAAAACCC",2,2.26,NA,NA,NA,NA,NA,NA,"stop","G9* G152L",2
"lib1","SARS-CoV-2","AAGGAAACACCCCAAT",3,23.25,9.23,-1.53,0.1,2.72,1.19,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","AAGGAAACAGTACCGA",1,14.01,10.18,-0.59,0.12,2.66,1.08,0.01,">1 nonsynonymous","L60D K128V",2
"lib1","SARS-CoV-2","AAGGAAACATTTGCCT",4,28.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R25F S41P G152T K198S",4
"lib1","SARS-CoV-2","AAGGAAACCCATTAAA",6,68.94,9.93,-0.83,0.1,2,1.08,0,">1 nonsynonymous","F8L F99H",2
"lib1","SARS-CoV-2","AAGGAAACCGAGTGAC",6,1.66,NA,NA,NA,NA,NA,NA,"stop","G9A R16G L187*",3
"lib1","SARS-CoV-2","AAGGAAAGATCGTTCC",3,58.46,6,-4.76,1.99,1.5,1.18,0.02,">1 nonsynonymous","Q144R F167R Q176V",3
"lib1","SARS-CoV-2","AAGGAAAGATCTAAAT",2,62.98,10.15,-0.62,0.05,2.95,1,0,">1 nonsynonymous","I2N N118D",2
"lib1","SARS-CoV-2","AAGGAAATAAGACGTA",2,3.46,NA,NA,NA,NA,NA,NA,"stop","G9S A14D K48D G86M K94H F99H N118*",7
"lib1","SARS-CoV-2","AAGGAAATCATACACT",12,0.29,NA,NA,NA,NA,NA,NA,"stop","A14T C61* K87N G152F P197C",5
"lib1","SARS-CoV-2","AAGGAAATGTGAGAGA",5,16.73,10.05,-0.72,0.11,2.74,1.17,0,">1 nonsynonymous","L5T P169S",2
"lib1","SARS-CoV-2","AAGGAACAAGAGAATC",2,8.18,6.18,-4.59,0.36,3,1.05,0,">1 nonsynonymous","W106Q E135S N151S K199G",4
"lib1","SARS-CoV-2","AAGGAACACTATGCTG",13,278.63,10.75,-0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGAACCAATTATCT",2,12.17,10.65,-0.12,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGAACCACACACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A33S W106* P161T S184P",4
"lib1","SARS-CoV-2","AAGGAACCGTCTCTTA",3,11.41,8.92,-1.85,0.4,1.5,1,0.08,">1 nonsynonymous","A33F T63Y G86R N120L",4
"lib1","SARS-CoV-2","AAGGAACGATAGTGCA",7,23.34,6,-4.76,1.5,1.5,1.15,0.04,">1 nonsynonymous","K26W D34S A42T D90C D112N",5
"lib1","SARS-CoV-2","AAGGAACTAGCTAGTG",1,31.84,8.86,-1.91,0.13,2.8,1.08,0.01,">1 nonsynonymous","P7D T55E Y119C G152T",4
"lib1","SARS-CoV-2","AAGGAACTCCCCACAA",2,11.51,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N4W A89E",2
"lib1","SARS-CoV-2","AAGGAACTCTGGCCAT",1,44.73,9.58,-1.18,0.11,2.45,1.09,0,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","AAGGAACTTATGATAA",6,58,8.4,-2.37,0.25,1.51,1.16,0.02,">1 nonsynonymous","N4L V103I N118Y T148H",4
"lib1","SARS-CoV-2","AAGGAACTTGTTAACC",4,13.47,6.55,-4.21,0.56,1.5,1.11,0.03,">1 nonsynonymous","I2A R73L D90V I104D D112I G155N",6
"lib1","SARS-CoV-2","AAGGAAGAAGAGATAA",1,11.68,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","T63I S139Q G146V",3
"lib1","SARS-CoV-2","AAGGAAGAAGATATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G51* F70E P96M S184H",4
"lib1","SARS-CoV-2","AAGGAAGAGGAATTAA",1,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90Q",1
"lib1","SARS-CoV-2","AAGGAAGCACCCTATC",7,139.97,10.73,-0.03,0.04,2.96,1.03,0,">1 nonsynonymous","V37A N58E Y123S",3
"lib1","SARS-CoV-2","AAGGAAGGCTAAACTG",5,118.87,9.13,-1.63,0.06,2.87,1.07,0,"1 nonsynonymous","A145Y",1
"lib1","SARS-CoV-2","AAGGAAGGCTGAACTT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","F126* P161Y S184L",3
"lib1","SARS-CoV-2","AAGGAAGTAACTCTTT",2,44.1,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L5E D68R G86V A190T",4
"lib1","SARS-CoV-2","AAGGAAGTCGAACATG",2,36.53,9.85,-0.92,0.06,2.77,1.07,0.01,">1 nonsynonymous","S45A Y91M",2
"lib1","SARS-CoV-2","AAGGAATAAACTTTTT",2,12.53,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","N92F I142T",2
"lib1","SARS-CoV-2","AAGGAATACCTTCATG",6,0.33,NA,NA,NA,NA,NA,NA,"stop","N13F C31R G51I I80*",4
"lib1","SARS-CoV-2","AAGGAATACGAATTGG",5,36.85,10.81,0.05,0.1,2.84,1.08,0,">1 nonsynonymous","Y39A T55S S147I V173L",4
"lib1","SARS-CoV-2","AAGGAATATACAATTG",1,10.09,10.13,-0.63,0.12,2.8,1.03,0.01,"1 nonsynonymous","C31F",1
"lib1","SARS-CoV-2","AAGGAATATATTACAT",6,90.08,9.19,-1.58,0.07,2.81,1.14,0,">1 nonsynonymous","L5V I104Y S147D G166M",4
"lib1","SARS-CoV-2","AAGGAATCAAATGGCA",11,83.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3V V11F E141N C150Y",4
"lib1","SARS-CoV-2","AAGGAATCAATCTCCA",1,9.95,10.81,0.05,0.14,2.85,1.11,0.01,"1 nonsynonymous","L111F",1
"lib1","SARS-CoV-2","AAGGAATCCACTCTAC",2,12.1,10.59,-0.17,0.1,2.72,1.18,0,"1 nonsynonymous","E10K",1
"lib1","SARS-CoV-2","AAGGAATCTGAACAAG",5,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y N13G D34K I88L W106T K132R",6
"lib1","SARS-CoV-2","AAGGAATGATACTTAG",9,25.39,6.11,-4.65,0.98,1.5,1.22,0.08,">1 nonsynonymous","N1I V20M S45A C158A T201S",5
"lib1","SARS-CoV-2","AAGGAATGCTAGGAGT",3,58.47,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T3I Y39V I88L D90T T100S",5
"lib1","SARS-CoV-2","AAGGAATGTAGCGCTA",3,27.69,7.7,-3.07,0.29,1.53,1.17,0.02,">1 nonsynonymous","A89H N118S T170S",3
"lib1","SARS-CoV-2","AAGGAATTAACACCTT",5,109.41,10.08,-0.68,0.08,2.51,1.01,0,">1 nonsynonymous","V52S P149H",2
"lib1","SARS-CoV-2","AAGGAATTAACGTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","K56Y D98* P149V",3
"lib1","SARS-CoV-2","AAGGACAAAAAACGCA",2,8.35,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V37G A42W Y91N S113L",4
"lib1","SARS-CoV-2","AAGGACAAACATGCGA",1,1.08,NA,NA,NA,NA,NA,NA,"stop","L5* S41D K128Y",3
"lib1","SARS-CoV-2","AAGGACAAACCTAATG",1,2.83,NA,NA,NA,NA,NA,NA,"stop","L38V Q84* F156L Q163C",4
"lib1","SARS-CoV-2","AAGGACAACAAGAAAT",4,36.66,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15G D34G C61S N107W R179C",5
"lib1","SARS-CoV-2","AAGGACACCCAAAGTA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","D90W L95* T100R T148I T201N",5
"lib1","SARS-CoV-2","AAGGACAGATAAAATG",1,35.29,9.82,-0.95,0.09,2.85,1.07,0,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","AAGGACAGATATACTA",3,56.13,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T55H N109I C158S L162V",4
"lib1","SARS-CoV-2","AAGGACAGTATAGGTA",4,97.97,10.53,-0.23,0.04,2.87,1.02,0,">1 nonsynonymous","F12M V173R",2
"lib1","SARS-CoV-2","AAGGACATATCACTAC",8,214.38,6.94,-3.83,0.13,1.5,1.12,0,">1 nonsynonymous","F126Y F134G N157V P197I",4
"lib1","SARS-CoV-2","AAGGACATCATTTAAG",8,59.32,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N13V K56S S69R V77M",4
"lib1","SARS-CoV-2","AAGGACATGGCAGCAT",7,53.93,9.96,-0.8,0.07,2.16,1.04,0,"1 nonsynonymous","F99H",1
"lib1","SARS-CoV-2","AAGGACATTAATATTA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","Q84* T170M",2
"lib1","SARS-CoV-2","AAGGACCAAGAAATCA",1,31.2,9.68,-1.08,0.06,2.63,1.09,0,">1 nonsynonymous","D90Y G155T",2
"lib1","SARS-CoV-2","AAGGACCACTGAGATA",10,51.41,6,-4.76,2,1.8,1.15,0.01,">1 nonsynonymous","C49F L122N V181M",3
"lib1","SARS-CoV-2","AAGGACCATAAGACTA",2,17.51,10.79,0.03,0.13,2.84,1.17,0,">1 nonsynonymous","D59R L122H",2
"lib1","SARS-CoV-2","AAGGACCATGGTGATT",8,45.55,9.03,-1.74,0.23,1.5,1.08,0.02,">1 nonsynonymous","V37G G51S I104T S113A",4
"lib1","SARS-CoV-2","AAGGACCATTACGTCA",5,1.12,NA,NA,NA,NA,NA,NA,"stop","D34A L57T D98* I138N Y159M",5
"lib1","SARS-CoV-2","AAGGACCATTAGTTAA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","A14R L38*",2
"lib1","SARS-CoV-2","AAGGACCCAAAAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37Q Y50K T55I S113T L122* P149T V173T",7
"lib1","SARS-CoV-2","AAGGACCCATACATTA",2,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P C158G",2
"lib1","SARS-CoV-2","AAGGACCCTAAGCAAA",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N Y91V N107L Q176S",4
"lib1","SARS-CoV-2","AAGGACCGAATTCGAA",3,63.56,9.96,-0.8,0.05,2.84,1.04,0,">1 nonsynonymous","S19Q K56D",2
"lib1","SARS-CoV-2","AAGGACCGATTGTATT",6,76.52,10.55,-0.21,0.05,2.88,1.07,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","AAGGACCGCGATAACA",3,67.49,9.37,-1.4,0.3,1.61,1.24,0.04,">1 nonsynonymous","T85K L131A",2
"lib1","SARS-CoV-2","AAGGACCTAATGGACT",1,20.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T Q79R V115L I142N G155P",5
"lib1","SARS-CoV-2","AAGGACCTCTCTAACC",3,13.05,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","D112P Q144V V180W",3
"lib1","SARS-CoV-2","AAGGACGACCGAATGC",4,28.81,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","G86V E154L",2
"lib1","SARS-CoV-2","AAGGACGACGTTACTA",1,6.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S129F R136F G155I L183C",4
"lib1","SARS-CoV-2","AAGGACGATTAGGTGT",2,49.08,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V11S V32S P82G G101A",4
"lib1","SARS-CoV-2","AAGGACGTATACATAC",4,49.5,8.1,-2.67,0.32,1.5,1.06,0.04,">1 nonsynonymous","L5T S29L D137I",3
"lib1","SARS-CoV-2","AAGGACGTATGCAAGG",5,57.46,10.74,-0.03,0.06,2.89,1.04,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","AAGGACGTGAATATTA",3,12.27,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","D34G K56W C61E K94C G101S G116R",6
"lib1","SARS-CoV-2","AAGGACTAGTACTTTA",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G Y91E V181A",3
"lib1","SARS-CoV-2","AAGGACTATGTGTATG",3,12.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L E141G",2
"lib1","SARS-CoV-2","AAGGACTGACACCTTT",8,101.38,10.59,-0.18,0.04,2.93,1.04,0,"1 nonsynonymous","Y66C",1
"lib1","SARS-CoV-2","AAGGACTTCAATTTTG",7,56.29,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N107R G116I I142S V173F",4
"lib1","SARS-CoV-2","AAGGACTTGATTAATT",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T A33L C49T A89R G146L",5
"lib1","SARS-CoV-2","AAGGACTTTGACGAGG",9,54.75,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E10S N40I Y119G S129L",4
"lib1","SARS-CoV-2","AAGGAGAAAAAAGTAA",3,88.6,10.09,-0.67,0.06,2.6,1.01,0,">1 nonsynonymous","F12I I72V K94N",3
"lib1","SARS-CoV-2","AAGGAGAAAAAGTCTT",1,140.7,10.09,-0.68,0.04,2.87,1.03,0,"1 nonsynonymous","G174H",1
"lib1","SARS-CoV-2","AAGGAGAACAACCGAA",11,204.53,10.73,-0.04,0.05,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGAGAAGGCCTCAT",6,0.1,NA,NA,NA,NA,NA,NA,"stop","V20* V37I D90W",3
"lib1","SARS-CoV-2","AAGGAGACACTACTGC",4,2.79,NA,NA,NA,NA,NA,NA,"stop","L95P I104N R127* N151Y",4
"lib1","SARS-CoV-2","AAGGAGACTCCCCAAG",2,14.84,9.85,-0.92,0.1,1.96,1.05,0,">1 nonsynonymous","P7Y A18R S41K",3
"lib1","SARS-CoV-2","AAGGAGACTCGAAGCT",3,26.91,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","E10G R16I T100F R124N I142F",5
"lib1","SARS-CoV-2","AAGGAGATAAGATGGG",7,55.65,6.1,-4.66,0.56,1.5,1.23,0.01,">1 nonsynonymous","T100P Y123L P149L",3
"lib1","SARS-CoV-2","AAGGAGATTCTAGGCG",3,40.64,10.12,-0.65,0.1,2.16,1.03,0,">1 nonsynonymous","S36D W106A",2
"lib1","SARS-CoV-2","AAGGAGCAGCCTTATT",9,83.52,10.18,-0.59,0.04,2.9,1,0,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","AAGGAGCCGCAGGATA",3,32.25,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C49Q G101C N130C",3
"lib1","SARS-CoV-2","AAGGAGCTATCAATGG",2,39.03,6,-4.76,1.43,1.5,1.19,0.01,">1 nonsynonymous","F8G R16E P96Q V173S",4
"lib1","SARS-CoV-2","AAGGAGCTGGCGATCA",5,31.51,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S53L T63F G86T",3
"lib1","SARS-CoV-2","AAGGAGGATATAAAAA",7,68.57,9.05,-1.71,0.33,1.5,1,0.06,">1 nonsynonymous","T3M P82T S129M",3
"lib1","SARS-CoV-2","AAGGAGGCCAAGTTTC",1,12.11,9.02,-1.74,0.25,1.9,1.1,0.03,">1 nonsynonymous","C6M A14V V37P",3
"lib1","SARS-CoV-2","AAGGAGGCTTTTCGTA",2,11.09,9.2,-1.57,0.11,2.68,1.16,0,">1 nonsynonymous","D34R F156M H189S",3
"lib1","SARS-CoV-2","AAGGAGGGCCCACTAT",3,19.54,9.76,-1,0.15,2.55,1,0.01,">1 nonsynonymous","E135R S164G",2
"lib1","SARS-CoV-2","AAGGAGGTTAACCGTA",1,12.21,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K128A V181K",2
"lib1","SARS-CoV-2","AAGGAGGTTCAACGGC",2,23.2,10.78,0.02,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGAGTAAAAAATGA",1,29.17,10.39,-0.38,0.05,2.79,1.05,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","AAGGAGTAAGTTTGAC",4,46.39,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F12A S45F F99N E135K",4
"lib1","SARS-CoV-2","AAGGAGTACTCACCCT",2,32.05,10.69,-0.07,0.04,2.99,1.01,0,">1 nonsynonymous","N40D K132V",2
"lib1","SARS-CoV-2","AAGGAGTACTGAGGTT",2,19.45,10.69,-0.07,0.11,2.87,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAGGAGTAGCACCCAA",1,69.45,10.73,-0.04,0.05,2.93,1.05,0,"1 nonsynonymous","N4V",1
"lib1","SARS-CoV-2","AAGGAGTTTATCAGTT",2,62.7,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S45M Y91S N107W K198N",4
"lib1","SARS-CoV-2","AAGGATAAATAAAGGT",5,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H V103H V182E E186S",4
"lib1","SARS-CoV-2","AAGGATAAATTCCTAC",8,97.76,7.93,-2.84,0.21,1.5,1.03,0.02,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","AAGGATAAGACGGTAT",4,60.67,8.99,-1.77,0.14,2.03,1.05,0.01,">1 nonsynonymous","V37W Y121D T201S",3
"lib1","SARS-CoV-2","AAGGATAATGTGCACC",2,77.52,10.63,-0.13,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGATACATAAGTAT",20,258.2,10.8,0.04,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGATATAGCCTTTT",4,52.06,9.89,-0.88,0.09,2.51,1.04,0,">1 nonsynonymous","A14C S19P T46L",3
"lib1","SARS-CoV-2","AAGGATATGTAATTGT",1,15.72,6,-4.76,2,1.5,1.47,0.06,">1 nonsynonymous","E10W S19Y N30R G86Y T170Y",5
"lib1","SARS-CoV-2","AAGGATATTACTGTGA",7,32.4,6.78,-3.98,0.15,1.5,1.11,0,">1 nonsynonymous","I88Y W106Y Y121E",3
"lib1","SARS-CoV-2","AAGGATCAAATAGCTT",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L R127Y P149S E186L",4
"lib1","SARS-CoV-2","AAGGATCAAATTACCT",4,61.23,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V20L D34R I88R Y121I R136P",5
"lib1","SARS-CoV-2","AAGGATCATGACCCCA",2,20.05,10.63,-0.13,0.04,3,1.01,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","AAGGATCATTGTCATG",2,26.1,10.78,0.01,0.07,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGATCCCCAACATG",4,51.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22G V52H I72R A105Y I138T",5
"lib1","SARS-CoV-2","AAGGATCGCTTGTCTC",6,0.11,NA,NA,NA,NA,NA,NA,"stop","L5* V77L T201P",3
"lib1","SARS-CoV-2","AAGGATGAAAGAGTTC",3,77.51,8.63,-2.14,0.18,2.07,1.13,0.01,">1 nonsynonymous","N107D P149K F156W",3
"lib1","SARS-CoV-2","AAGGATGAAATTCACG",15,231.66,10.65,-0.11,0.04,2.89,1.05,0,">1 nonsynonymous","Y39H S53I",2
"lib1","SARS-CoV-2","AAGGATGAGGTTACTA",4,38.45,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F12R R27T Y93I L131M T170R",5
"lib1","SARS-CoV-2","AAGGATGATGACAGAA",6,82.93,8.79,-1.97,0.23,1.5,1.05,0.03,">1 nonsynonymous","F99L G155V",2
"lib1","SARS-CoV-2","AAGGATGATTCGGTAC",4,3.31,NA,NA,NA,NA,NA,NA,"stop","Y21L N92L V115S K132R N157S P177*",6
"lib1","SARS-CoV-2","AAGGATGCATATAATG",4,47.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2T F12H N24I C61L E135T P191C",6
"lib1","SARS-CoV-2","AAGGATGCGTGCCATA",3,37.13,10.59,-0.17,0.11,2.95,1.04,0.01,">1 nonsynonymous","T55Y L122E",2
"lib1","SARS-CoV-2","AAGGATGCTTGTTCTT",1,104.18,10.7,-0.06,0.06,2.89,1.06,0,">1 nonsynonymous","R27E T201Q",2
"lib1","SARS-CoV-2","AAGGATGGGGCTGACG",4,149.86,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G83T D90L T148S Q163P V173F",5
"lib1","SARS-CoV-2","AAGGATGGTATACTGA",12,26.84,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V37C F99P Y119S F156Y",4
"lib1","SARS-CoV-2","AAGGATGGTGTACATA",3,38.32,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y21S N151Y N157V",3
"lib1","SARS-CoV-2","AAGGATGGTTTTACCC",16,175.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6R G101L",2
"lib1","SARS-CoV-2","AAGGATGTAGATAAGT",4,44.96,8.67,-2.1,0.09,2.77,1.07,0,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","AAGGATGTATTATGAA",5,0,NA,NA,NA,NA,NA,NA,"stop","L111E G174* T201R",3
"lib1","SARS-CoV-2","AAGGATGTCGCGTTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41Y V71* L162Y",3
"lib1","SARS-CoV-2","AAGGATTAAGAAGAGT",3,118.9,10.16,-0.6,0.05,2.85,1,0,">1 nonsynonymous","S41K K114H S139A",3
"lib1","SARS-CoV-2","AAGGATTAGGGTCTTA",1,11.75,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F12I R73T D112V V194M",4
"lib1","SARS-CoV-2","AAGGATTATACGATTA",7,167.8,10.79,0.03,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGATTCATGACGGC",4,2.47,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","AAGGATTCCCGAAGGG",3,18.13,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A22T V77T L162R G172L",4
"lib1","SARS-CoV-2","AAGGATTGCTGGCTTA",5,20.15,7.61,-3.15,0.26,1.5,1.01,0.02,">1 nonsynonymous","G9M K94D",2
"lib1","SARS-CoV-2","AAGGATTTAAAAGTAT",2,12.94,10.67,-0.09,0.13,2.68,1.21,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGGATTTCTATGTTG",1,5.44,NA,NA,NA,NA,NA,NA,"stop","S41N C61*",2
"lib1","SARS-CoV-2","AAGGATTTGAAAAAGC",5,0.12,NA,NA,NA,NA,NA,NA,"stop","V11C L60R L122* P133S",4
"lib1","SARS-CoV-2","AAGGCAAAAAATATAT",1,6.79,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","L38D K48P",2
"lib1","SARS-CoV-2","AAGGCAAAAATGTAGA",4,31.01,10.02,-0.75,0.09,2.64,1.06,0,">1 nonsynonymous","Y21T A42T",2
"lib1","SARS-CoV-2","AAGGCAAAATAATAAC",5,15.12,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R73E L95M W106Q N157R S184F",5
"lib1","SARS-CoV-2","AAGGCAAAATGAAGCC",1,9.57,10.16,-0.6,0.17,2.84,1.11,0.01,">1 nonsynonymous","K87M N151K",2
"lib1","SARS-CoV-2","AAGGCAAATTACCCGG",1,41.55,6.41,-4.36,0.49,1.5,1.19,0.02,">1 nonsynonymous","Y91F F99T",2
"lib1","SARS-CoV-2","AAGGCAACAAGCAGTG",3,74.22,10.76,0,0.06,2.93,1.03,0,"1 nonsynonymous","N64H",1
"lib1","SARS-CoV-2","AAGGCAACACATCAAT",1,60.73,10.79,0.02,0.1,2.92,1,0,">1 nonsynonymous","V32W K48Q T55N T201Q",4
"lib1","SARS-CoV-2","AAGGCAACTGTCAAAT",3,87.38,9.6,-1.16,0.15,1.82,1.07,0.01,">1 nonsynonymous","S53L W106K Y123S",3
"lib1","SARS-CoV-2","AAGGCAACTTTGAAAC",1,43.47,10.3,-0.46,0.06,2.85,1.02,0,">1 nonsynonymous","A42W G116I",2
"lib1","SARS-CoV-2","AAGGCAAGAAACAAAC",3,42.13,9.71,-1.05,0.11,2.71,1.07,0.01,">1 nonsynonymous","N107T L122S",2
"lib1","SARS-CoV-2","AAGGCAAGAAATACGG",1,8.84,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F44L K94E Q168R",3
"lib1","SARS-CoV-2","AAGGCAAGGGTTGATA",4,30.77,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V71S T85A Y165E",3
"lib1","SARS-CoV-2","AAGGCAATAGTAAGAG",3,39.96,9.72,-1.04,0.1,2.59,1.11,0,">1 nonsynonymous","Y39Q G155F K199M",3
"lib1","SARS-CoV-2","AAGGCAATAGTAGCTA",2,20.4,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","Y93F V182S",2
"lib1","SARS-CoV-2","AAGGCAATATCTCTAC",1,43.48,8.41,-2.35,0.16,1.56,1.1,0.02,">1 nonsynonymous","N4M S113G R136T A190G",4
"lib1","SARS-CoV-2","AAGGCACAAAACTGTA",2,21.92,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","D34A G101R N157D",3
"lib1","SARS-CoV-2","AAGGCACAACAAACTC",1,23.67,6.06,-4.71,1.09,1.5,1.17,0.01,">1 nonsynonymous","C6S F99V S147N T170S",4
"lib1","SARS-CoV-2","AAGGCACAACGCAGCC",12,182.26,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","R27G L38I C61R W106N N120R R179L",6
"lib1","SARS-CoV-2","AAGGCACAGGGTATCG",3,18.82,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V11G V65K",2
"lib1","SARS-CoV-2","AAGGCACCCTGGCAAC",1,19.03,8.16,-2.6,0.42,1.5,1.13,0.08,">1 nonsynonymous","Y143M Y165M G174S S184V",4
"lib1","SARS-CoV-2","AAGGCACCGGGATCAA",2,3.79,NA,NA,NA,NA,NA,NA,"stop","R16S C61* I88Y",3
"lib1","SARS-CoV-2","AAGGCACCTGAAGCTG",2,19.69,10.53,-0.23,0.09,2.81,1.02,0,">1 nonsynonymous","F12I T100H",2
"lib1","SARS-CoV-2","AAGGCACCTGACCCCT",12,123.38,8.1,-2.66,0.19,1.5,1.1,0.01,">1 nonsynonymous","N4R V37R R127E",3
"lib1","SARS-CoV-2","AAGGCACGCATAAGCC",8,77.91,6,-4.76,2,3,1.2,0,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","AAGGCACGTTAGGGAC",2,30.05,10.52,-0.24,0.17,2.82,1.1,0.02,">1 nonsynonymous","T63Y T100M",2
"lib1","SARS-CoV-2","AAGGCACTACCCGGAC",6,34.12,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N64A I80M Y165N",3
"lib1","SARS-CoV-2","AAGGCACTAGTCCTTC",5,39.19,8.44,-2.33,0.27,1.5,1.19,0.03,">1 nonsynonymous","P82I E135A",2
"lib1","SARS-CoV-2","AAGGCACTGAATCGTA",4,61.49,8.4,-2.36,0.25,1.53,1.09,0.02,">1 nonsynonymous","E154I Y165P V173L",3
"lib1","SARS-CoV-2","AAGGCAGAACGTTCAT",6,84.48,10.82,0.05,0.07,2.94,1.04,0,">1 nonsynonymous","L5Q V37W G83Y",3
"lib1","SARS-CoV-2","AAGGCAGAAGCAATGA",3,71.87,8.44,-2.32,0.14,2.12,1.09,0.01,">1 nonsynonymous","N1L N157Y",2
"lib1","SARS-CoV-2","AAGGCAGATGCTACGT",1,25.87,8.82,-1.95,0.26,2.24,1.27,0.02,">1 nonsynonymous","S69F Y119S",2
"lib1","SARS-CoV-2","AAGGCAGATGGATGAG",4,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R D137R P149F",3
"lib1","SARS-CoV-2","AAGGCAGCCCACGACT",4,52.75,7.99,-2.78,0.41,1.5,1.04,0.06,">1 nonsynonymous","L38N E76T D90Y G146L N151F T201C",6
"lib1","SARS-CoV-2","AAGGCAGCTCAGGTCA",2,22.72,10.11,-0.65,0.12,2.22,1.04,0.01,">1 nonsynonymous","Y35Q S129F",2
"lib1","SARS-CoV-2","AAGGCAGTGTCTACAG",2,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","AAGGCATATACTTTAG",10,1.54,NA,NA,NA,NA,NA,NA,"stop","S19* N64L I104E F134M",4
"lib1","SARS-CoV-2","AAGGCATATTGTGGTT",8,47.47,9.93,-0.83,0.13,2.19,1.05,0.01,">1 nonsynonymous","A42S W106L T201Y",3
"lib1","SARS-CoV-2","AAGGCATCAATTGATA",12,171.78,10.47,-0.29,0.03,2.96,1,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","AAGGCATCGACCTGAA",9,18.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35M C61E R124S Q168W E186I",5
"lib1","SARS-CoV-2","AAGGCATGAACCATAC",6,92.35,8.68,-2.08,0.08,2.85,1.05,0,">1 nonsynonymous","Y175N A190R",2
"lib1","SARS-CoV-2","AAGGCATGTCGCACAT",2,104.92,6.07,-4.69,0.85,1.5,1.18,0.02,">1 nonsynonymous","N92Q P161D Y165S Q176L",4
"lib1","SARS-CoV-2","AAGGCATTGACGTTGA",12,94.11,9.4,-1.37,0.13,1.72,1.13,0.01,">1 nonsynonymous","C49V N130Y",2
"lib1","SARS-CoV-2","AAGGCCAAATTACTGT",2,61.33,9.96,-0.81,0.08,2.61,1.01,0,">1 nonsynonymous","T15W K26V N171A",3
"lib1","SARS-CoV-2","AAGGCCAAGGACACAA",1,45.42,10.14,-0.62,0.09,2.69,1,0,">1 nonsynonymous","E10K D90Y",2
"lib1","SARS-CoV-2","AAGGCCATTTCACTGG",4,46.22,8.61,-2.15,0.08,2.33,1.09,0,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","AAGGCCATTTCTCCGC",4,86.73,10.04,-0.73,0.03,2.51,1.04,0,">1 nonsynonymous","I72V D112I",2
"lib1","SARS-CoV-2","AAGGCCCAATTTGTAG",5,70,10.67,-0.09,0.05,2.9,1.09,0,">1 nonsynonymous","N4S C61E T148V",3
"lib1","SARS-CoV-2","AAGGCCCACGGCAATA",2,28.22,8.55,-2.21,0.17,1.53,1.11,0.01,">1 nonsynonymous","F17R E141M",2
"lib1","SARS-CoV-2","AAGGCCCCATACGGCC",4,13.56,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","I2S C61L D97G V103F",4
"lib1","SARS-CoV-2","AAGGCCCCCCATTTAA",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P G116W F185T",3
"lib1","SARS-CoV-2","AAGGCCCCCTCAAGTT",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4M G83C K94R I104P F134D C150N",6
"lib1","SARS-CoV-2","AAGGCCCCTAAATTAA",7,31.51,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N40A S113R Y119F F126A",4
"lib1","SARS-CoV-2","AAGGCCCTTGTACGGG",3,39.71,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C6I A18W Y39T T46H C61A A81E C102T S139E C150M",9
"lib1","SARS-CoV-2","AAGGCCGAAGATTTTA",2,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M V103F F156S V173M",4
"lib1","SARS-CoV-2","AAGGCCGAGAACAAAG",2,21.32,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R73P W106T G172N L183I",4
"lib1","SARS-CoV-2","AAGGCCTTAGTCTATA",3,97.82,10.76,0,0.06,2.88,1.08,0,"1 nonsynonymous","A18H",1
"lib1","SARS-CoV-2","AAGGCCTTTACATGAA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V N120L K128R C195R",4
"lib1","SARS-CoV-2","AAGGCGAAACAGCTCT",3,4.85,NA,NA,NA,NA,NA,NA,"stop","V20L D34T K48Y L57* N151K",5
"lib1","SARS-CoV-2","AAGGCGAAAGCTCTAT",2,30.27,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F167S V181E",2
"lib1","SARS-CoV-2","AAGGCGAAATATCCAG",4,84.38,8.98,-1.78,0.16,1.64,1.13,0.01,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","AAGGCGAACAATACTT",5,44.08,10.9,0.14,0.08,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGCGAATCCATTGA",7,131.81,10.02,-0.74,0.1,2.11,1.04,0,">1 nonsynonymous","Y39A Y91G",2
"lib1","SARS-CoV-2","AAGGCGACAGATAAAA",4,45.37,9.42,-1.34,0.08,1.88,1.11,0,">1 nonsynonymous","C61Y N107R T140R",3
"lib1","SARS-CoV-2","AAGGCGACCTCGAATT",12,63.07,6,-4.76,0.85,1.5,1.14,0.01,">1 nonsynonymous","D34G D97N L183T T201M",4
"lib1","SARS-CoV-2","AAGGCGCACCAATGAG",3,58.85,10.9,0.14,0.1,2.92,1.03,0,"1 nonsynonymous","Q168Y",1
"lib1","SARS-CoV-2","AAGGCGCAGACGACAT",13,85.59,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A105K E135M",2
"lib1","SARS-CoV-2","AAGGCGCAGTACAGAC",1,0.48,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib1","SARS-CoV-2","AAGGCGCCACAACGAC",6,119.27,8.31,-2.46,0.2,1.89,1.11,0.01,">1 nonsynonymous","V65W G166H",2
"lib1","SARS-CoV-2","AAGGCGTAAACATAAA",5,95.99,10.42,-0.35,0.04,2.86,1.08,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","AAGGCGTAAGGCGATT",8,49.92,10.27,-0.49,0.12,2.62,1,0.01,">1 nonsynonymous","F99L T201M",2
"lib1","SARS-CoV-2","AAGGCGTAGACTGACG",3,1.4,NA,NA,NA,NA,NA,NA,"stop","T15Y K94* V103K N157P",4
"lib1","SARS-CoV-2","AAGGCGTTACCCTTTT",1,8.7,6.05,-4.72,1.54,1.5,1.14,0.03,"1 nonsynonymous","D137W",1
"lib1","SARS-CoV-2","AAGGCGTTATTAAATT",6,18.88,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K94W S139I",2
"lib1","SARS-CoV-2","AAGGCTAAAGATTAGG",6,5.34,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6L I88A V103S S129L Q144T G152S C158P",7
"lib1","SARS-CoV-2","AAGGCTAAATACTTAC",5,76.1,6.25,-4.52,0.5,1.5,1.15,0.01,">1 nonsynonymous","L38P F134R C150Q",3
"lib1","SARS-CoV-2","AAGGCTAATGTAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T T63L T100F K128T N157H",5
"lib1","SARS-CoV-2","AAGGCTATAATTAGCC",3,23.89,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C31E F167P",2
"lib1","SARS-CoV-2","AAGGCTATATCTACTA",1,16.73,10.69,-0.08,0.05,2.86,1.1,0,">1 nonsynonymous","A42N H189S",2
"lib1","SARS-CoV-2","AAGGCTATCATAACAA",17,288.17,10.66,-0.11,0.03,2.92,1.03,0,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","AAGGCTATGACAGGTC",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120H E141I",2
"lib1","SARS-CoV-2","AAGGCTATTCTAGAAA",2,135.57,10.57,-0.19,0.03,2.93,1,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","AAGGCTCAACAGACCT",4,31.84,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F44M D112Q",2
"lib1","SARS-CoV-2","AAGGCTCAATTCTGGA",5,21.66,6.1,-4.67,0.71,1.5,1.2,0.02,">1 nonsynonymous","S45W P54C D68L T100S C150W V182M",6
"lib1","SARS-CoV-2","AAGGCTCACAACGAAA",6,119.75,10.61,-0.16,0.05,2.9,1.06,0,">1 nonsynonymous","F62S I138D",2
"lib1","SARS-CoV-2","AAGGCTCACTACAATA",1,25.59,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","F8A D90H G101V G174E",4
"lib1","SARS-CoV-2","AAGGCTCACTTGGCGA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I D90L N107R L122S S139N G155R",6
"lib1","SARS-CoV-2","AAGGCTCTCCGATTAA",1,20.65,10.79,0.03,0.11,2.8,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGGCTCTGAGAAACG",2,63.56,10.77,0.01,0.08,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGCTGAAAAAAGTA",2,30.43,10.26,-0.5,0.11,2.7,1,0.01,">1 nonsynonymous","P54T G83R Q84H",3
"lib1","SARS-CoV-2","AAGGCTGATACACCGA",2,102.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N64E R78G G86Q G116L Y175E",5
"lib1","SARS-CoV-2","AAGGCTGTTACACCCG",2,2.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93Q",1
"lib1","SARS-CoV-2","AAGGCTTATCTCGTTC",7,28.27,8.86,-1.91,0.21,1.5,1,0.02,">1 nonsynonymous","N40S S108R",2
"lib1","SARS-CoV-2","AAGGCTTCTATGCACA",6,56.37,9.3,-1.46,0.33,1.5,1,0.08,">1 nonsynonymous","F99T T148R",2
"lib1","SARS-CoV-2","AAGGCTTCTGCCATAT",3,44.18,6.59,-4.18,0.62,1.5,1.13,0.05,">1 nonsynonymous","A22F L131G G152A Q163G",4
"lib1","SARS-CoV-2","AAGGCTTGACTCTAAA",5,31.03,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G86V F99L P197T",3
"lib1","SARS-CoV-2","AAGGGAAACACGGTAA",2,6.87,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D34P N107I G146C N151D",4
"lib1","SARS-CoV-2","AAGGGAAACTAGGACC",2,17.37,6,-4.76,1.83,1.5,1.1,0.04,">1 nonsynonymous","C6V V20G I142S",3
"lib1","SARS-CoV-2","AAGGGAAACTTAACGC",3,3.54,NA,NA,NA,NA,NA,NA,"stop","E10Y S29V D68M A81* A145L",5
"lib1","SARS-CoV-2","AAGGGAAAGTAGGACC",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P A18S F44G N64L D97S T140V",6
"lib1","SARS-CoV-2","AAGGGAAATACGCCAT",2,71.06,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P161Q Q163W G172A",3
"lib1","SARS-CoV-2","AAGGGAAATGGAAAAA",2,33.66,10.2,-0.57,0.11,2.38,1,0.01,">1 nonsynonymous","A105H V153K",2
"lib1","SARS-CoV-2","AAGGGAACCTAGAAGG",2,41.65,10.73,-0.03,0.06,2.95,1,0,">1 nonsynonymous","A105S I138L",2
"lib1","SARS-CoV-2","AAGGGAACGAACACAG",1,29.39,9.8,-0.97,0.2,1.83,1.13,0.02,">1 nonsynonymous","V37H S139L G152M",3
"lib1","SARS-CoV-2","AAGGGAACGTGCACCC",3,6.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F S43M N107H Q163S G174V A190H",6
"lib1","SARS-CoV-2","AAGGGAAGTTTTACGG",1,0.96,NA,NA,NA,NA,NA,NA,"stop","I28* V52F L60H G83* G146N",5
"lib1","SARS-CoV-2","AAGGGAATAATCGAAT",5,71.07,6,-4.76,1.99,1.5,1.22,0.03,">1 nonsynonymous","G9V T63S N107Y",3
"lib1","SARS-CoV-2","AAGGGAATTGCATCAC",1,6.36,8.15,-2.61,0.12,2.07,1.01,0,">1 nonsynonymous","C49M E154D",2
"lib1","SARS-CoV-2","AAGGGACAACTAAATT",8,61.93,10.65,-0.11,0.06,2.93,1.05,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","AAGGGACATCTCCAAT",4,87.03,7.82,-2.95,0.12,1.65,1.14,0.01,">1 nonsynonymous","P7S S19Q C61G K87N D97M",5
"lib1","SARS-CoV-2","AAGGGACCACTCCATG",1,21.99,10.84,0.08,0.08,2.92,1.01,0,"1 nonsynonymous","N58M",1
"lib1","SARS-CoV-2","AAGGGACCATCTAAGC",3,11.44,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","G86R Y93N D98S",3
"lib1","SARS-CoV-2","AAGGGACGACGAATCA",1,52.41,10.68,-0.08,0.08,2.95,1.03,0,">1 nonsynonymous","V37Q K56N T63D G196V",4
"lib1","SARS-CoV-2","AAGGGACGCTTAAAAA",1,46.5,8.62,-2.14,0.13,1.85,1.18,0.01,">1 nonsynonymous","L95T G174L",2
"lib1","SARS-CoV-2","AAGGGACTTAATTACC",6,110.19,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D97T E141W G172E",3
"lib1","SARS-CoV-2","AAGGGACTTGCCAAGT",2,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L V71S P82N S113Q N171R E186M",6
"lib1","SARS-CoV-2","AAGGGAGAAAATGCCT",1,6.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I R16C F17I N58T V77Y R78H W106R",7
"lib1","SARS-CoV-2","AAGGGAGAGGTACATA",2,25.57,10.4,-0.37,0.06,2.93,1.01,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","AAGGGAGCAGCGGGTG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","S41A D112V T140*",3
"lib1","SARS-CoV-2","AAGGGAGGACGTGGCA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","D90K T148* F167N",3
"lib1","SARS-CoV-2","AAGGGAGTAGCTTTAA",2,47.09,10.12,-0.64,0.08,2.92,1.02,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","AAGGGATACGTGACTG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S P82L S184I",3
"lib1","SARS-CoV-2","AAGGGATAGTAAATAT",2,27.83,10.37,-0.39,0.07,2.89,1.02,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","AAGGGATATTAATATA",2,58.18,10.75,-0.02,0.06,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGGATGCCTCCACG",1,53.4,10.83,0.06,0.08,2.92,1.04,0,">1 nonsynonymous","S43M D98N N151L",3
"lib1","SARS-CoV-2","AAGGGATGGCGCAAGC",4,12.36,10.69,-0.07,0.1,2.83,1.07,0.01,">1 nonsynonymous","F44I T201A",2
"lib1","SARS-CoV-2","AAGGGATGGTATAGGC",9,140.05,9.97,-0.79,0.03,2.96,1.01,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","AAGGGATTGAAGCAAC",14,58.86,10.82,0.06,0.1,2.87,1.07,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","AAGGGCAAAACTTATC",1,59.78,6.17,-4.59,1.32,1.5,1.19,0.05,">1 nonsynonymous","N58Y L95K G117V",3
"lib1","SARS-CoV-2","AAGGGCAAATAATACA",1,82.15,10.8,0.03,0.09,2.88,1.08,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","AAGGGCAACTAAACCC",1,4.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25K",1
"lib1","SARS-CoV-2","AAGGGCACAGATCGAG",4,21.32,9.21,-1.55,0.18,1.92,1.08,0.01,">1 nonsynonymous","F12G R78A T148K",3
"lib1","SARS-CoV-2","AAGGGCAGAAATGTGG",4,0.35,NA,NA,NA,NA,NA,NA,"stop","D34V N107T V115E I138*",4
"lib1","SARS-CoV-2","AAGGGCATGCCCTGAA",3,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K D98H R127L S200M",4
"lib1","SARS-CoV-2","AAGGGCATTCTCAAAA",4,70.48,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61N I88Y R127G T140L",4
"lib1","SARS-CoV-2","AAGGGCCACAGGTCTA",4,54.91,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y121S Y175G Y178L",3
"lib1","SARS-CoV-2","AAGGGCCCAGACACAA",1,59.25,9.1,-1.67,0.21,1.59,1.18,0.02,">1 nonsynonymous","L38S Q144T",2
"lib1","SARS-CoV-2","AAGGGCGCGATTTTAT",6,97.06,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N157K R179Y",2
"lib1","SARS-CoV-2","AAGGGCGGGCACGATC",2,0,NA,NA,NA,NA,NA,NA,"stop","G117C G172* R179S V182P",4
"lib1","SARS-CoV-2","AAGGGCGGTATTTGCT",2,6.25,10.74,-0.02,0.13,2.9,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGGGCGTGACAAGGG",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I G155W K198L",3
"lib1","SARS-CoV-2","AAGGGGAACCAATAAA",1,29.99,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A18S I72A D90Y V103K",4
"lib1","SARS-CoV-2","AAGGGGACAAATAGAA",4,1.82,NA,NA,NA,NA,NA,NA,"stop","A33* D90P",2
"lib1","SARS-CoV-2","AAGGGGACACTGTTGC",3,35.39,8.98,-1.78,0.14,2.81,1.15,0.01,">1 nonsynonymous","S53A T148F Q168L P197K",4
"lib1","SARS-CoV-2","AAGGGGACTACTTGAT",4,32.24,10.52,-0.24,0.08,2.9,1,0,">1 nonsynonymous","P7R A14R I104M",3
"lib1","SARS-CoV-2","AAGGGGATGTAACATT",3,32.62,8.58,-2.18,0.24,1.82,1.23,0.02,">1 nonsynonymous","A18M G74S",2
"lib1","SARS-CoV-2","AAGGGGCAAATGATCC",8,71.35,9.44,-1.33,0.19,1.68,1.13,0.01,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","AAGGGGCAACTTAGAC",3,91.68,10.83,0.06,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGGGCACCGAACAA",2,12.04,8.09,-2.67,0.24,1.5,1.08,0.02,">1 nonsynonymous","I104G G152L",2
"lib1","SARS-CoV-2","AAGGGGCCAACTGAGT",2,48.29,6.17,-4.6,0.78,1.5,1.23,0.03,">1 nonsynonymous","N30I P82T",2
"lib1","SARS-CoV-2","AAGGGGCGACAACGGA",2,63.73,10.3,-0.47,0.07,2.57,1,0,">1 nonsynonymous","T15I P149F",2
"lib1","SARS-CoV-2","AAGGGGCTCTTTAATG",2,26.69,10.49,-0.27,0.07,2.85,1.08,0,">1 nonsynonymous","R16K E141I",2
"lib1","SARS-CoV-2","AAGGGGGAATTCGGAC",5,70.85,10.81,0.05,0.09,2.91,1.02,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","AAGGGGGACTATGAAT",6,133.23,10.77,0.01,0.07,2.88,1.09,0,">1 nonsynonymous","N64D L122K",2
"lib1","SARS-CoV-2","AAGGGGGCGATACAAT",2,8.85,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","P96Y S113F N118E P133G",4
"lib1","SARS-CoV-2","AAGGGGGGCCGATGTT",8,102.33,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","I2G V32Y V65S L162R",4
"lib1","SARS-CoV-2","AAGGGGGGGCCAGATT",5,53.73,10.01,-0.75,0.1,2.57,1.08,0,">1 nonsynonymous","C6N K132G",2
"lib1","SARS-CoV-2","AAGGGGGTCCCTTCAA",2,10.74,6,-4.76,2,3,1.33,0.02,">1 nonsynonymous","C6D F44Q C61G G146V",4
"lib1","SARS-CoV-2","AAGGGGGTTAGATGTA",8,129.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D68A A89Q P133E",3
"lib1","SARS-CoV-2","AAGGGGTAATCCCATA",5,86.63,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N58M Y175P",2
"lib1","SARS-CoV-2","AAGGGGTTAAATTTAT",4,46.77,10.22,-0.55,0.07,2.85,1.03,0,">1 nonsynonymous","V32A E135D",2
"lib1","SARS-CoV-2","AAGGGTAGACTTCCAT",2,16.59,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","N24R S69D G86M F99Y",4
"lib1","SARS-CoV-2","AAGGGTAGCTGTTTAC",2,14,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F47W D90I S113Q",3
"lib1","SARS-CoV-2","AAGGGTAGGCAGCATA",2,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R V71Y A81N D98L G166L",5
"lib1","SARS-CoV-2","AAGGGTATAAAACACG",6,40.61,6.63,-4.13,0.62,1.5,1.09,0.04,">1 nonsynonymous","D68E L95F C150D",3
"lib1","SARS-CoV-2","AAGGGTATCGCGTTTC",3,19.95,10.78,0.02,0.26,2.4,1.05,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AAGGGTATTAGCGTTA",6,22.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","AAGGGTCAAACTGAGT",2,21.67,10.01,-0.75,0.07,2.95,1,0,"1 nonsynonymous","T170Y",1
"lib1","SARS-CoV-2","AAGGGTCAACCAGATG",7,137.49,10.62,-0.14,0.07,2.8,1.09,0,"1 nonsynonymous","K198Y",1
"lib1","SARS-CoV-2","AAGGGTCTAATACATA",4,91.71,9.69,-1.08,0.09,2.58,1.07,0,">1 nonsynonymous","C6G G51K",2
"lib1","SARS-CoV-2","AAGGGTCTGATACAGA",3,5.08,7.77,-3,0.57,1.5,1.15,0.06,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","AAGGGTGTTTGTACAG",2,25.57,10.29,-0.48,0.08,2.82,1.12,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","AAGGGTTAAATCACTG",1,21.03,6,-4.76,2,1.5,1.14,0.02,"1 nonsynonymous","D112W",1
"lib1","SARS-CoV-2","AAGGGTTATGTGACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37F A81F K132L Q144T C158Y F160*",6
"lib1","SARS-CoV-2","AAGGGTTCCACTTATT",2,48.66,10.23,-0.53,0.06,2.98,1,0,"1 nonsynonymous","L162F",1
"lib1","SARS-CoV-2","AAGGGTTGAGACGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61F K114* Y119R S129N",4
"lib1","SARS-CoV-2","AAGGGTTTAGTTAACT",3,109.16,10.73,-0.03,0.05,2.92,1.05,0,"1 nonsynonymous","T55F",1
"lib1","SARS-CoV-2","AAGGGTTTAGTTAAGC",1,2.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","AAGGTAAAAACACGAA",1,7.67,9.93,-0.83,0.24,2.39,1.03,0.02,">1 nonsynonymous","F8G L60S A192E",3
"lib1","SARS-CoV-2","AAGGTAAAACCCCGAA",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N R73V C102P I142F T201L",5
"lib1","SARS-CoV-2","AAGGTAAAAGTAAAAC",3,10.86,7.32,-3.44,0.23,1.5,1.01,0.02,">1 nonsynonymous","A22T T55C R78F Q168D L183C",5
"lib1","SARS-CoV-2","AAGGTAAACACAAAAA",1,6.68,7.32,-3.44,0.47,1.5,1.13,0.08,">1 nonsynonymous","A89W Q144D",2
"lib1","SARS-CoV-2","AAGGTAAACGACTAAG",2,5.31,9.49,-1.28,0.36,1.67,1.19,0.03,">1 nonsynonymous","L5G R27L V37G L57M S139I",5
"lib1","SARS-CoV-2","AAGGTAAAGGAAACAT",3,100.24,10.11,-0.65,0.08,2.57,1.01,0,">1 nonsynonymous","F62T E135Y",2
"lib1","SARS-CoV-2","AAGGTAAAGGATCGAA",8,5.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13C F99D S139T L187H",4
"lib1","SARS-CoV-2","AAGGTAACAAAATGAC",2,148.63,10.01,-0.75,0.11,2.14,1.04,0,">1 nonsynonymous","L5H S43R V65L D98L Y178N",5
"lib1","SARS-CoV-2","AAGGTAACCTTATAAG",2,55.92,9.6,-1.17,0.08,2.85,1.05,0,"1 nonsynonymous","F126C",1
"lib1","SARS-CoV-2","AAGGTAAGATAGCCAT",2,52.8,10.87,0.1,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGTAAGCACCTTGG",2,2.38,NA,NA,NA,NA,NA,NA,"stop","I28A K56* F62Y L122M F134Q",5
"lib1","SARS-CoV-2","AAGGTAATATAATTTA",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70I P96R E141S",3
"lib1","SARS-CoV-2","AAGGTAATATACTAAG",1,19.04,8.6,-2.17,0.12,2.64,1,0.01,">1 nonsynonymous","K114I G146M",2
"lib1","SARS-CoV-2","AAGGTAATATGATAAG",7,0.73,NA,NA,NA,NA,NA,NA,"stop","N4H A81*",2
"lib1","SARS-CoV-2","AAGGTAATCGGCCCAT",1,19.58,10.77,0.01,0.06,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGGTAATGGAACATG",2,14.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86M D98K",2
"lib1","SARS-CoV-2","AAGGTACAATATATTA",6,76.46,6.41,-4.35,0.43,1.5,1.16,0.02,">1 nonsynonymous","R127L I138R",2
"lib1","SARS-CoV-2","AAGGTACAGTAAAATG",7,44.54,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7C K48I L131S",3
"lib1","SARS-CoV-2","AAGGTACATAACGCTA",1,132.12,10.02,-0.74,0.04,2.89,1.01,0,"1 nonsynonymous","G146N",1
"lib1","SARS-CoV-2","AAGGTACATCCGAGAG",1,31.46,10.77,0.01,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGTACCCTGAACAA",2,28.74,10.55,-0.21,0.09,2.88,1.06,0,">1 nonsynonymous","S43Y P96S",2
"lib1","SARS-CoV-2","AAGGTACGATCTGGCT",1,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y Q176W",2
"lib1","SARS-CoV-2","AAGGTACTATTTCCTA",10,0.82,NA,NA,NA,NA,NA,NA,"stop","F8S F99* K114N N120* G152M Y165L",6
"lib1","SARS-CoV-2","AAGGTACTTAAACCGC",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86K Y143I",2
"lib1","SARS-CoV-2","AAGGTACTTCCCTAAC",4,49.98,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8C L38I Y119R P161M",4
"lib1","SARS-CoV-2","AAGGTAGACGCACGTA",8,30.17,6,-4.76,2,3,1.22,0,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","AAGGTAGCAAACACTA",3,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16S Y91A W106C",3
"lib1","SARS-CoV-2","AAGGTAGCCGAGTATC",3,46.28,9.91,-0.86,0.07,2.91,1.04,0,">1 nonsynonymous","F156N K199L",2
"lib1","SARS-CoV-2","AAGGTAGTCTAATTCC",5,2.49,NA,NA,NA,NA,NA,NA,"stop","C6E I138T G146*",3
"lib1","SARS-CoV-2","AAGGTAGTGAACTTTC",3,143.46,10.02,-0.74,0.05,2.62,1.05,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","AAGGTATAAAATTACA",11,41.24,6,-4.76,1.9,1.5,1.18,0.02,">1 nonsynonymous","A33F S129N F167R",3
"lib1","SARS-CoV-2","AAGGTATACAATAATA",2,5.06,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","T63M I88S N130V V180W",4
"lib1","SARS-CoV-2","AAGGTATCCGGGATGA",3,45.59,8.69,-2.07,0.22,1.7,1.19,0.02,">1 nonsynonymous","Q84W D90W V173W",3
"lib1","SARS-CoV-2","AAGGTATCCTTTCTCA",5,60.27,10.2,-0.56,0.09,2.7,1,0,">1 nonsynonymous","G83L P133Q V173L",3
"lib1","SARS-CoV-2","AAGGTATGACGTAGTA",4,42.86,9.86,-0.9,0.07,1.93,1.04,0,">1 nonsynonymous","T3F D59Q K94S V173K",4
"lib1","SARS-CoV-2","AAGGTATTAAGTCCAG",3,24.08,10.79,0.03,0.09,2.8,1.04,0.01,">1 nonsynonymous","R27V Y35W",2
"lib1","SARS-CoV-2","AAGGTATTAGTAGTAC",3,10.83,10.92,0.16,0.09,2.94,1.05,0,"1 nonsynonymous","V32T",1
"lib1","SARS-CoV-2","AAGGTATTCCATGATA",5,17.22,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I88N V103W Q144D Y159F",4
"lib1","SARS-CoV-2","AAGGTATTTTACTGAG",2,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R L60G S69V",3
"lib1","SARS-CoV-2","AAGGTCAAAATGAAAT",5,38.34,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I2V P54L A105N Y119T T170V",5
"lib1","SARS-CoV-2","AAGGTCAACAAATCAG",10,186.71,10.32,-0.44,0.04,2.93,1.02,0,"1 nonsynonymous","N30L",1
"lib1","SARS-CoV-2","AAGGTCACGGTATTTC",3,46.26,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F8R W23G F99S N120S R127L A145P",6
"lib1","SARS-CoV-2","AAGGTCAGACATGATT",6,169.97,10.73,-0.03,0.05,2.9,1.03,0,"1 nonsynonymous","V194I",1
"lib1","SARS-CoV-2","AAGGTCAGGAGTTACT",2,25.91,10.78,0.01,0.06,2.88,1.1,0,">1 nonsynonymous","I28L N64A I138D",3
"lib1","SARS-CoV-2","AAGGTCATTCCTCATT",5,121.34,10.51,-0.25,0.04,2.93,1.03,0,">1 nonsynonymous","V37R T170S",2
"lib1","SARS-CoV-2","AAGGTCCAAATATTCT",2,22.12,10.66,-0.1,0.17,2.84,1.19,0.01,">1 nonsynonymous","T3S V37A F62T",3
"lib1","SARS-CoV-2","AAGGTCCGACCCCGAC",10,60.85,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","W23I D68L D90S N107H Y119L G155P",6
"lib1","SARS-CoV-2","AAGGTCCGATAAACTA",2,9.3,NA,NA,NA,NA,NA,NA,"stop","G9F A33S V77M I88* E141Y",5
"lib1","SARS-CoV-2","AAGGTCCGCCAATAGG",7,92.54,10.12,-0.64,0.06,2.47,1.04,0,"1 nonsynonymous","P96E",1
"lib1","SARS-CoV-2","AAGGTCGACTATTTTT",2,26.05,9.2,-1.56,0.07,2.33,1.11,0,">1 nonsynonymous","N120F G155Y",2
"lib1","SARS-CoV-2","AAGGTCGCGTTTAACT",7,146.47,10.2,-0.56,0.05,2.92,1.03,0,">1 nonsynonymous","C61M G174K",2
"lib1","SARS-CoV-2","AAGGTCGGTTCTCTCC",4,64.17,10.69,-0.08,0.05,2.94,1.03,0,">1 nonsynonymous","D90N K132S",2
"lib1","SARS-CoV-2","AAGGTCTAAAGCCATG",11,118.9,10.83,0.06,0.06,2.95,1.01,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","AAGGTCTACTTTTAAA",11,82.33,10.73,-0.03,0.06,2.88,1.07,0,">1 nonsynonymous","I28L P54K C61P N120S",4
"lib1","SARS-CoV-2","AAGGTCTATAGAATGG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","F12* N120* K128N",3
"lib1","SARS-CoV-2","AAGGTCTATATTACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L F44L S108T A192T",4
"lib1","SARS-CoV-2","AAGGTCTCGGTGGCTA",2,17.24,6.02,-4.74,1.18,1.5,1.15,0.04,">1 nonsynonymous","A14G A81N D137T",3
"lib1","SARS-CoV-2","AAGGTCTTTCTGGAAA",8,82.93,8.44,-2.32,0.26,1.5,1.06,0.03,">1 nonsynonymous","K94Q F99L",2
"lib1","SARS-CoV-2","AAGGTGAAATTCGAAG",3,103,8.73,-2.04,0.06,2.81,1.04,0,">1 nonsynonymous","T3L S113N",2
"lib1","SARS-CoV-2","AAGGTGAATTCATAGA",2,27.47,10.81,0.05,0.08,2.82,1.13,0,">1 nonsynonymous","D98N T201I",2
"lib1","SARS-CoV-2","AAGGTGACTGACACCC",4,19.88,9.99,-0.78,0.23,2.03,1,0.02,"1 nonsynonymous","C49T",1
"lib1","SARS-CoV-2","AAGGTGATAATCTACA",3,15.38,10.57,-0.2,0.06,2.86,1.08,0,">1 nonsynonymous","L5V D90L",2
"lib1","SARS-CoV-2","AAGGTGATGGATACCT",5,1.1,NA,NA,NA,NA,NA,NA,"stop","A33S S36* F99L I104K S139E",5
"lib1","SARS-CoV-2","AAGGTGCATAAGATAA",1,31.31,8.87,-1.9,0.31,1.61,1.07,0.04,">1 nonsynonymous","G152T P161T",2
"lib1","SARS-CoV-2","AAGGTGCATACATCCA",3,0,NA,NA,NA,NA,NA,NA,"stop","D97T N151*",2
"lib1","SARS-CoV-2","AAGGTGCCAAAAACAG",7,93.91,10.15,-0.61,0.11,2.24,1.03,0.01,">1 nonsynonymous","A67C D98I T148M",3
"lib1","SARS-CoV-2","AAGGTGCCCGCATTGC",6,37.95,10.14,-0.62,0.12,2.69,1.03,0.01,">1 nonsynonymous","N13K G152S",2
"lib1","SARS-CoV-2","AAGGTGCCTAGTCAAC",1,16.04,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","K48N S69E A89S T100D P177S",5
"lib1","SARS-CoV-2","AAGGTGCTAAAAGTCA",1,3.35,NA,NA,NA,NA,NA,NA,"stop","I28* G51Y Y121S",3
"lib1","SARS-CoV-2","AAGGTGCTACACTGCA",3,38.13,10.67,-0.1,0.08,2.92,1.01,0,">1 nonsynonymous","S29V T55L N64C",3
"lib1","SARS-CoV-2","AAGGTGGAAGACGAAG",5,150.95,10.69,-0.07,0.07,2.89,1.07,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","AAGGTGGACTGTACAC",4,1.24,NA,NA,NA,NA,NA,NA,"stop","F12G S41L F156R S184*",4
"lib1","SARS-CoV-2","AAGGTGGAGGCCACAA",5,98.7,10.52,-0.25,0.04,2.91,1.02,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","AAGGTGGCTCGTGACT",4,54.57,10.15,-0.61,0.07,2.8,1.02,0,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","AAGGTGGGAATAGATC",3,60.99,10.64,-0.12,0.12,2.83,1.11,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AAGGTGGTATTACGTG",3,31.54,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","N58L L95R",2
"lib1","SARS-CoV-2","AAGGTGTGCACTTACC",1,20.94,7.77,-3,0.09,1.57,1.05,0,">1 nonsynonymous","W106T N157H",2
"lib1","SARS-CoV-2","AAGGTTAAAAGATGAG",1,14.52,10.73,-0.03,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGTTACAATTAGAA",3,114.11,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Q84M N157I Y165M",3
"lib1","SARS-CoV-2","AAGGTTACAGATGACG",8,254.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44R Y119V Y175G",3
"lib1","SARS-CoV-2","AAGGTTACCGTGTTAG",1,98.63,10.3,-0.46,0.04,2.87,1.06,0,">1 nonsynonymous","S36R G174K",2
"lib1","SARS-CoV-2","AAGGTTACGCTATAGC",10,81.9,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10S S69Y G101V N118M A145S",5
"lib1","SARS-CoV-2","AAGGTTACTGGTTGAC",1,9.05,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F44N G74S A81V D98A F185H",5
"lib1","SARS-CoV-2","AAGGTTATAGAGACCG",3,87.3,10.61,-0.15,0.04,2.85,1.08,0,">1 nonsynonymous","D97N N130L P149T",3
"lib1","SARS-CoV-2","AAGGTTCAAAAAACAA",4,19.01,8.61,-2.16,0.24,1.5,1.13,0.02,">1 nonsynonymous","A22R L38R F44L",3
"lib1","SARS-CoV-2","AAGGTTCAAAAACAGG",5,1.03,NA,NA,NA,NA,NA,NA,"stop","R27N P96* T100N",3
"lib1","SARS-CoV-2","AAGGTTCACAGAAAAG",4,0.38,NA,NA,NA,NA,NA,NA,"stop","T55* N151V C158V E186V",4
"lib1","SARS-CoV-2","AAGGTTCCTGGAGTAC",3,1.8,NA,NA,NA,NA,NA,NA,"stop","Y143* T148P Y175I",3
"lib1","SARS-CoV-2","AAGGTTCGAATAAAGG",1,3.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","AAGGTTCTCAGCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L T63L D90G",3
"lib1","SARS-CoV-2","AAGGTTCTGATTATCG",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L G86E N120G S139L",4
"lib1","SARS-CoV-2","AAGGTTCTGTGGACTA",8,0.05,NA,NA,NA,NA,NA,NA,"stop","V11F A33R D97L S113Y N118T Y175V K199*",7
"lib1","SARS-CoV-2","AAGGTTCTGTTGAGAT",10,33.48,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V103R R136S G152Q",3
"lib1","SARS-CoV-2","AAGGTTCTTCTAAAAT",8,152.4,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","F8Y F62L R78F K94S S113H K128P F134L",7
"lib1","SARS-CoV-2","AAGGTTGAAGATCTTC",4,1.11,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib1","SARS-CoV-2","AAGGTTGATTACCAAC",2,9740.81,6.78,-3.98,0.27,1.5,1.11,0.01,">1 nonsynonymous","S129P P161V",2
"lib1","SARS-CoV-2","AAGGTTGCCGTTTTCT",2,0.29,NA,NA,NA,NA,NA,NA,"stop","D97* F160Y",2
"lib1","SARS-CoV-2","AAGGTTGGAATAGATG",2,138.7,8.62,-2.14,0.24,1.5,1.07,0.02,">1 nonsynonymous","K94L G152S",2
"lib1","SARS-CoV-2","AAGGTTGTAATGGTGT",1,10.48,9.38,-1.39,0.15,2.7,1.18,0.01,">1 nonsynonymous","L60Y Y119N L122F S129I",4
"lib1","SARS-CoV-2","AAGGTTTCATAAAAGC",1,11.72,8.25,-2.52,0.12,1.86,1.01,0.01,">1 nonsynonymous","C6P S45H Y91L",3
"lib1","SARS-CoV-2","AAGGTTTCGACTTATG",5,94.59,9.88,-0.89,0.08,2.56,1.08,0,">1 nonsynonymous","C6H A33P",2
"lib1","SARS-CoV-2","AAGGTTTCTCGCATCA",8,108.79,8.86,-1.91,0.08,2.55,1.11,0,">1 nonsynonymous","C61V E141L G146T",3
"lib1","SARS-CoV-2","AAGGTTTCTTGCTTAT",5,31.71,10.82,0.06,0.06,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGGTTTGACCCCCAC",3,34.81,10.8,0.04,0.07,2.92,1.03,0,">1 nonsynonymous","Q168A A190G",2
"lib1","SARS-CoV-2","AAGGTTTGCGAACTCC",3,56.86,10.81,0.05,0.06,2.96,1.01,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","AAGGTTTGGGACAAAA",4,49.87,8.1,-2.66,0.34,1.5,1.09,0.04,">1 nonsynonymous","P82T E141C T201L",3
"lib1","SARS-CoV-2","AAGGTTTGTTCTAAGG",3,13.99,7.04,-3.72,0.09,1.8,1.02,0,">1 nonsynonymous","Y35P D98H N109Y T140E G146S",5
"lib1","SARS-CoV-2","AAGGTTTTGTTCTACA",1,18.89,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N1L R16D L95E E154R S184L A192S",6
"lib1","SARS-CoV-2","AAGTAAAAAACAAATT",4,19.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T55L I80L V103A K132Y",4
"lib1","SARS-CoV-2","AAGTAAAAACAATACG",8,97.6,10.82,0.06,0.06,2.95,1.04,0,">1 nonsynonymous","V153L A192T",2
"lib1","SARS-CoV-2","AAGTAAAAACGGATTA",15,22.41,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D34I G86T F99I W106R E141L Q163K",6
"lib1","SARS-CoV-2","AAGTAAAAACGTAATG",10,204.06,8.31,-2.46,0.14,1.79,1.12,0.01,">1 nonsynonymous","C6V Y21W G166C",3
"lib1","SARS-CoV-2","AAGTAAAAACTACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2P A14R F62L N107G Y119L G146S N151L G174*",8
"lib1","SARS-CoV-2","AAGTAAAAAGAGACGT",3,13.94,8.32,-2.45,0.4,1.56,1.05,0.05,">1 nonsynonymous","C6G F17S I142L",3
"lib1","SARS-CoV-2","AAGTAAAAATGGAGAG",6,32.87,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","T3D P54L G86L Y165W",4
"lib1","SARS-CoV-2","AAGTAAAACTAGACAA",3,80.4,10.78,0.02,0.09,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTAAAACTCACAGG",4,67.52,10.55,-0.22,0.04,2.89,1.04,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","AAGTAAAAGAAACCAT",9,143.23,10.79,0.03,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTAAAAGGATACCG",2,43.25,8.68,-2.08,0.08,2.84,1.13,0,">1 nonsynonymous","A14S F126R",2
"lib1","SARS-CoV-2","AAGTAAAATCGAATTG",2,19.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C T63V D97Y",3
"lib1","SARS-CoV-2","AAGTAAAATTAGTAGA",1,3.65,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AAGTAAACAAATGGAT",4,79.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K48Q G101F G116E I142S",4
"lib1","SARS-CoV-2","AAGTAAACAATACAAA",3,64.13,10.63,-0.13,0.05,2.92,1.02,0,">1 nonsynonymous","T3L V32E",2
"lib1","SARS-CoV-2","AAGTAAACAATCAGGG",4,36.79,9.43,-1.34,0.09,1.9,1.06,0,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","AAGTAAACACATTTTG",1,1.51,NA,NA,NA,NA,NA,NA,"stop","T3C Y119*",2
"lib1","SARS-CoV-2","AAGTAAACGAATGGAA",1,14.81,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Q79H N92H S139T",3
"lib1","SARS-CoV-2","AAGTAAACGTTTCTCT",5,2.32,NA,NA,NA,NA,NA,NA,"stop","L60D T85* Y91L D97Y C150R",5
"lib1","SARS-CoV-2","AAGTAAACTTCAATGG",2,16.25,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","I28S P96Y",2
"lib1","SARS-CoV-2","AAGTAAAGCCATCTCG",1,23.97,10.78,0.01,0.03,3,1,0,"1 nonsynonymous","L60E",1
"lib1","SARS-CoV-2","AAGTAAAGCTATGCAG",4,124.65,9.46,-1.3,0.17,1.63,1.09,0.01,">1 nonsynonymous","I72M Y178V",2
"lib1","SARS-CoV-2","AAGTAAAGCTCATCCT",3,7.2,10.32,-0.44,0.07,2.96,1,0,">1 nonsynonymous","S36R D98I I138V",3
"lib1","SARS-CoV-2","AAGTAAAGGCCTTACC",2,83.53,10.66,-0.1,0.04,2.91,1.02,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","AAGTAAAGTATAAATT",4,19.33,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L38I I104G E141W V180I",4
"lib1","SARS-CoV-2","AAGTAAAGTGTGACAA",4,55.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D98M N120Y N157Y",3
"lib1","SARS-CoV-2","AAGTAAATAAAAGAGG",5,22.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6E V20G C61Y D112S P169G",5
"lib1","SARS-CoV-2","AAGTAAATAGAAATGT",5,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E K26M N40L G86N F99L",5
"lib1","SARS-CoV-2","AAGTAAATCCGGTCGG",2,34.82,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I80T Y159H",2
"lib1","SARS-CoV-2","AAGTAAATGTCCACGC",4,30.6,10.91,0.15,0.11,2.91,1.03,0,">1 nonsynonymous","N1R G9H",2
"lib1","SARS-CoV-2","AAGTAAATTAGGACAA",3,60.6,10.74,-0.03,0.03,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTAAATTATCTTGA",1,14.37,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S45L P96L V103Q Y123L Y143L P177E",6
"lib1","SARS-CoV-2","AAGTAACAAAACTTGC",3,31.55,10.45,-0.31,0.06,2.92,1.01,0,">1 nonsynonymous","G9P S29D V37M",3
"lib1","SARS-CoV-2","AAGTAACAAAGATTTG",1,19.33,10.75,-0.02,0.09,2.85,1.16,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","AAGTAACACGAAAGTA",4,28.63,8.66,-2.1,0.1,1.72,1.06,0,">1 nonsynonymous","R136L T148G V153P Q163Y",4
"lib1","SARS-CoV-2","AAGTAACAGACTACTT",3,15.08,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F44D C61K G86D N151K F156G T201R",6
"lib1","SARS-CoV-2","AAGTAACAGTTATTAA",4,19.05,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","V20R",1
"lib1","SARS-CoV-2","AAGTAACCAAAATGTA",1,30.76,10.7,-0.06,0.09,2.91,1.08,0,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","AAGTAACCCGAGGTTA",1,8.57,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4P T55H F70L G101S G116S E141D",6
"lib1","SARS-CoV-2","AAGTAACCGAGATAGC",6,106.99,10.41,-0.35,0.15,2.65,1.09,0.01,"1 nonsynonymous","E10N",1
"lib1","SARS-CoV-2","AAGTAACCGGACCGAA",6,7.85,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C49K V103A",2
"lib1","SARS-CoV-2","AAGTAACGAAAGCCGT",4,5.26,10.49,-0.27,0.19,2.95,1.06,0.02,">1 nonsynonymous","G117R N157D N171I",3
"lib1","SARS-CoV-2","AAGTAACGAGAAAATG",1,13.06,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12V D68T P82T V115I",4
"lib1","SARS-CoV-2","AAGTAACGAGAGCACT",2,10.28,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","G9W G101M",2
"lib1","SARS-CoV-2","AAGTAACGATAACAAC",3,25.71,6.37,-4.39,0.41,1.5,1.09,0.01,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","AAGTAACGGCGTAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42H K56* G116N G152C",4
"lib1","SARS-CoV-2","AAGTAACGTAGCCCAA",5,58.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N I72W K94V V153G",4
"lib1","SARS-CoV-2","AAGTAACTAAAAGACC",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R A14D",2
"lib1","SARS-CoV-2","AAGTAACTAGACATCA",4,1.31,NA,NA,NA,NA,NA,NA,"stop","E10* T15R C31D L188H",4
"lib1","SARS-CoV-2","AAGTAACTAGCCTAAG",4,41.58,10.07,-0.69,0.11,1.93,1.04,0,">1 nonsynonymous","A14T E135F",2
"lib1","SARS-CoV-2","AAGTAACTCACAGGAA",10,58.54,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S69H C102S P169G Y175C",4
"lib1","SARS-CoV-2","AAGTAACTCGCCATAT",3,319.47,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F62M Y93D",2
"lib1","SARS-CoV-2","AAGTAACTCGTTTTAA",5,6.54,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R25L G174R T201G",3
"lib1","SARS-CoV-2","AAGTAACTGACAATTA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C V173F",2
"lib1","SARS-CoV-2","AAGTAACTGTCCAAGG",6,3.25,NA,NA,NA,NA,NA,NA,"stop","T85* T100S V173S",3
"lib1","SARS-CoV-2","AAGTAACTGTCTACTA",4,119.47,10.82,0.05,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTAACTTAGGTTGA",4,0,NA,NA,NA,NA,NA,NA,"stop","A33K F47W K56M G86* L162A",5
"lib1","SARS-CoV-2","AAGTAACTTAGTTCGT",17,2.34,NA,NA,NA,NA,NA,NA,"stop","G9L S53* Y93A K128*",4
"lib1","SARS-CoV-2","AAGTAAGACGCCTTTA",2,45.28,10.74,-0.03,0.07,2.94,1.01,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","AAGTAAGAGCTTTTAG",4,14.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R136S Q144L",2
"lib1","SARS-CoV-2","AAGTAAGATGCACTAT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N4K G86* K94* Y123G",4
"lib1","SARS-CoV-2","AAGTAAGATTTGTAAC",5,21.13,6.18,-4.58,0.52,1.73,1.18,0.02,">1 nonsynonymous","S41Y L95D I142Y N151G",4
"lib1","SARS-CoV-2","AAGTAAGCCAATGTAG",3,71.32,10.75,-0.02,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTAAGCCGATAAGT",1,37.37,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K94T F99R G146V",3
"lib1","SARS-CoV-2","AAGTAAGCGCCACTAG",2,17.58,7.91,-2.86,0.19,1.91,1.08,0.01,">1 nonsynonymous","V37S A81Y K87E",3
"lib1","SARS-CoV-2","AAGTAAGCGGCTAATC",4,0.5,NA,NA,NA,NA,NA,NA,"stop","F44R K56*",2
"lib1","SARS-CoV-2","AAGTAAGGACTCAGAT",3,59.12,6,-4.76,1.02,1.5,1.17,0.01,">1 nonsynonymous","A14F A22G V37C F44M",4
"lib1","SARS-CoV-2","AAGTAAGGTTTTCGAC",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90G N120L R127S T201I",4
"lib1","SARS-CoV-2","AAGTAAGTTACCACCG",5,60.52,9.47,-1.29,0.08,2.75,1.12,0,">1 nonsynonymous","V65L F126I",2
"lib1","SARS-CoV-2","AAGTAAGTTCTTGGAA",1,2.35,NA,NA,NA,NA,NA,NA,"stop","Y91* D98R",2
"lib1","SARS-CoV-2","AAGTAATACCGCACTG",7,71.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9A W106L P149F Q176L",4
"lib1","SARS-CoV-2","AAGTAATAGACCGCCG",1,26.99,9,-1.77,0.22,1.5,1.06,0.03,">1 nonsynonymous","K48L A67F N107S",3
"lib1","SARS-CoV-2","AAGTAATAGGTCCTCT",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S D98M V181C",3
"lib1","SARS-CoV-2","AAGTAATATTTAAAAA",1,8.56,9.74,-1.02,0.17,2.85,1.1,0.03,"1 nonsynonymous","Q168E",1
"lib1","SARS-CoV-2","AAGTAATCACCTAGCA",1,10.22,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","A105K R127S Q144V",3
"lib1","SARS-CoV-2","AAGTAATCTCCACATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124M",1
"lib1","SARS-CoV-2","AAGTAATGAAATTGAT",2,12.98,6,-4.76,1.04,3,1.07,0.01,">1 nonsynonymous","F126S G155Y",2
"lib1","SARS-CoV-2","AAGTAATGCCGTTAGT",3,90.15,10.2,-0.57,0.08,2.81,1.04,0,">1 nonsynonymous","D90T P149T",2
"lib1","SARS-CoV-2","AAGTAATTAAAATCAG",7,55.36,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","E10V L60W D90M Y119S F185T",5
"lib1","SARS-CoV-2","AAGTAATTAGCGTAAG",4,10.03,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","P82S P96G V103C F156L F167I",5
"lib1","SARS-CoV-2","AAGTAATTCTTCTCAG",2,5.91,9.6,-1.16,0.12,2.84,1.11,0.01,">1 nonsynonymous","A22M Y35M G155T G174R",4
"lib1","SARS-CoV-2","AAGTAATTTCCATTGC",1,14.47,9.13,-1.64,0.25,2.24,1.14,0.03,">1 nonsynonymous","V37A C49S L122R",3
"lib1","SARS-CoV-2","AAGTACAAAAAGAACG",14,261.16,9.19,-1.58,0.07,2.9,1.09,0,"1 nonsynonymous","G117E",1
"lib1","SARS-CoV-2","AAGTACAACGATTTAG",5,25.96,10.14,-0.63,0.06,2.99,1,0,">1 nonsynonymous","D59L Y121L",2
"lib1","SARS-CoV-2","AAGTACAAGATGAACT",1,64.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7S R25L Y35Q Q176S",4
"lib1","SARS-CoV-2","AAGTACAATAAGTATC",2,38.92,6,-4.76,1.2,2.51,1.25,0.01,">1 nonsynonymous","F62A Q84W L95C F156L",4
"lib1","SARS-CoV-2","AAGTACAATAGAAACC",4,64.94,10.78,0.02,0.07,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTACAATAGTGTGT",3,70.56,6,-4.76,1.51,1.5,1.22,0.01,">1 nonsynonymous","L5H D112L N130E Y165T Q176L",5
"lib1","SARS-CoV-2","AAGTACAATTCTTTAG",5,21.27,6.38,-4.39,0.53,1.5,1.16,0.01,">1 nonsynonymous","I2R G9A N40K S45I N58S T85K K128S G152I N171A",9
"lib1","SARS-CoV-2","AAGTACACAACGTCCT",1,39.03,10.6,-0.16,0.06,2.96,1,0,">1 nonsynonymous","K26V T46W S53L",3
"lib1","SARS-CoV-2","AAGTACACAGGCAAAA",6,30.72,6.14,-4.63,1.16,1.5,1.15,0.04,">1 nonsynonymous","K56L Y93V T148V",3
"lib1","SARS-CoV-2","AAGTACACCCACTATG",3,54.35,6,-4.76,1.53,1.5,1.22,0.03,">1 nonsynonymous","G74A L162T",2
"lib1","SARS-CoV-2","AAGTACACTAGCATGG",11,85.03,10.77,0.01,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTACACTCAAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H V103A",2
"lib1","SARS-CoV-2","AAGTACAGAGTAAATT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91M",1
"lib1","SARS-CoV-2","AAGTACAGCGATAAGT",1,108.02,10.07,-0.7,0.08,2.53,1,0,">1 nonsynonymous","I2N A105V N120R T148H",4
"lib1","SARS-CoV-2","AAGTACAGCTAAAACA",2,5.27,9.14,-1.63,0.33,2.35,1.33,0.04,">1 nonsynonymous","F8S A14S",2
"lib1","SARS-CoV-2","AAGTACAGGCTTTAGT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39F D59Y F70W G101W K114E T193R",6
"lib1","SARS-CoV-2","AAGTACAGTGATCGAC",4,3.23,NA,NA,NA,NA,NA,NA,"stop","T15Q Y39* Y50F G146I N151V",5
"lib1","SARS-CoV-2","AAGTACAGTTAAACCC",1,36.44,8.59,-2.18,0.08,2.84,1.09,0,"1 nonsynonymous","S113H",1
"lib1","SARS-CoV-2","AAGTACATCATGATTA",1,51.54,10.32,-0.44,0.04,2.92,1.03,0,">1 nonsynonymous","V37C S184Y",2
"lib1","SARS-CoV-2","AAGTACATCTACTGAC",1,88.91,10.12,-0.64,0.12,2.47,1,0.01,">1 nonsynonymous","V52A N58L",2
"lib1","SARS-CoV-2","AAGTACATTTCATTAG",7,38.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42F K87C F99P Y175F",4
"lib1","SARS-CoV-2","AAGTACCAAAGCGTAA",1,19.47,9.93,-0.84,0.13,2.62,1.08,0.01,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","AAGTACCACCTCTGAT",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Q N107L N151V",3
"lib1","SARS-CoV-2","AAGTACCAGAAAGAAA",5,39.85,10.71,-0.06,0.1,2.92,1.09,0,"1 nonsynonymous","K199M",1
"lib1","SARS-CoV-2","AAGTACCAGCATATTG",2,36.74,9.67,-1.09,0.15,1.96,1.06,0.01,">1 nonsynonymous","T15V K48W",2
"lib1","SARS-CoV-2","AAGTACCAGCGACGTA",2,9.48,9.62,-1.15,0.32,1.66,1.11,0.06,"1 nonsynonymous","F12D",1
"lib1","SARS-CoV-2","AAGTACCATGACAAAA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","I2L A18* A81L Q168K P197A",5
"lib1","SARS-CoV-2","AAGTACCCACGTGCCT",7,61.26,10.57,-0.2,0.05,2.94,1.04,0,"1 nonsynonymous","L57I",1
"lib1","SARS-CoV-2","AAGTACCCAGTTCCTG",1,54.2,10.73,-0.04,0.06,2.9,1.07,0,"1 nonsynonymous","N130C",1
"lib1","SARS-CoV-2","AAGTACCCCGAGCGAA",3,23.43,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F12N F44S V103L P169F Y175S",5
"lib1","SARS-CoV-2","AAGTACCCCTCATTTC",6,37.43,6.07,-4.69,0.87,1.5,1.19,0.02,">1 nonsynonymous","E76K F126G",2
"lib1","SARS-CoV-2","AAGTACCCTGATATCA",8,91.66,10.67,-0.1,0.06,2.88,1.02,0,">1 nonsynonymous","L60I P149S",2
"lib1","SARS-CoV-2","AAGTACCGCTGCAAAT",9,86.29,10.75,-0.01,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTACCGTAATGCTT",5,2.16,NA,NA,NA,NA,NA,NA,"stop","Y93* I142G",2
"lib1","SARS-CoV-2","AAGTACCGTTTCACTA",4,44.4,10.55,-0.21,0.04,2.92,1.04,0,">1 nonsynonymous","K56H Y123A",2
"lib1","SARS-CoV-2","AAGTACCTAATTATAA",4,50.79,10.63,-0.14,0.08,2.89,1.06,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","AAGTACCTATGCGGCA",2,49.37,10.7,-0.06,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTACCTGAAGTTCC",9,2.41,NA,NA,NA,NA,NA,NA,"stop","R16Y C49F N157* E186H",4
"lib1","SARS-CoV-2","AAGTACGACACAATGT",5,79.63,7.98,-2.78,0.26,1.5,1.06,0.02,"1 nonsynonymous","A105D",1
"lib1","SARS-CoV-2","AAGTACGAGATTATTA",4,0.9,NA,NA,NA,NA,NA,NA,"stop","A22T S36V F44* L122D G174Q T201*",6
"lib1","SARS-CoV-2","AAGTACGAGTTTAACA",1,41.63,10.5,-0.27,0.05,2.9,1.05,0,">1 nonsynonymous","Y50F G83A L122T",3
"lib1","SARS-CoV-2","AAGTACGCACGATGCT",2,21.1,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V20M N58F D90S G116M Y123L",5
"lib1","SARS-CoV-2","AAGTACGCATATTTAA",3,29.02,7.95,-2.81,0.2,1.86,1.18,0.01,">1 nonsynonymous","S36D K48M C61M D97V G117V",5
"lib1","SARS-CoV-2","AAGTACGGAACGTGTG",4,81.58,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R73N Y178E",2
"lib1","SARS-CoV-2","AAGTACGGTAAAGCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S D112* N118H V173P",4
"lib1","SARS-CoV-2","AAGTACTAAAGGCACC",6,67.59,9.25,-1.52,0.2,1.5,1.09,0.02,">1 nonsynonymous","W23L F160H",2
"lib1","SARS-CoV-2","AAGTACTACACCGGGG",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I T63N D90Y Y178C",4
"lib1","SARS-CoV-2","AAGTACTAGTATAGAT",1,43.04,7.64,-3.12,0.27,1.56,1.18,0.03,">1 nonsynonymous","V11Y I28Q S129F Y178V",4
"lib1","SARS-CoV-2","AAGTACTCAAACATAG",8,104.05,6,-4.76,2,1.5,1.19,0,">1 nonsynonymous","L60T C150V",2
"lib1","SARS-CoV-2","AAGTACTCATAGATCT",1,36.41,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y93D F167L",2
"lib1","SARS-CoV-2","AAGTACTCTAATTCTA",5,1.98,NA,NA,NA,NA,NA,NA,"stop","N1* W23L P54M L162H Q176M",5
"lib1","SARS-CoV-2","AAGTACTCTTAGATTG",2,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99W",1
"lib1","SARS-CoV-2","AAGTACTGAAACCCTA",1,23.31,10.98,0.22,0.1,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTACTGACAGATGC",1,27.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5T Y35R K48V P96Y",4
"lib1","SARS-CoV-2","AAGTACTGCAATAACT",2,46.84,8.77,-2,0.14,2.31,1.03,0.01,">1 nonsynonymous","K56G P149N Q176S",3
"lib1","SARS-CoV-2","AAGTACTGGTGCCAGG",2,80.18,10.52,-0.24,0.05,2.94,1.04,0,">1 nonsynonymous","K128N G155A",2
"lib1","SARS-CoV-2","AAGTACTGTATCACTA",8,61.83,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F99R S129N Y143C",3
"lib1","SARS-CoV-2","AAGTACTTACTATGCC",1,0.08,NA,NA,NA,NA,NA,NA,"stop","Y35* I88M T201D",3
"lib1","SARS-CoV-2","AAGTACTTCAAATTTT",4,39.75,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P7L V71K N109I Y165N G174F T201C",6
"lib1","SARS-CoV-2","AAGTACTTCATCCAGT",3,22.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K87R W106L S108L Q163T",4
"lib1","SARS-CoV-2","AAGTAGAAACTACATA",3,47.29,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","R136L Y159C",2
"lib1","SARS-CoV-2","AAGTAGAAAGGAAAGT",3,13.6,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N64I A81Y L122W G155D C158V",5
"lib1","SARS-CoV-2","AAGTAGAAATGCGGCA",2,69.2,10.81,0.04,0.09,2.86,1.06,0,">1 nonsynonymous","T3M P197L",2
"lib1","SARS-CoV-2","AAGTAGAACCAAGACT",6,87.79,10.41,-0.35,0.06,2.91,1,0,">1 nonsynonymous","S36W K128V",2
"lib1","SARS-CoV-2","AAGTAGAAGATCCCCT",1,8.4,10.61,-0.16,0.12,2.97,1.04,0,">1 nonsynonymous","I2E S41L F62C",3
"lib1","SARS-CoV-2","AAGTAGACCTACATCA",4,65.21,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L60V V115F K132A T148Y Y165Q",5
"lib1","SARS-CoV-2","AAGTAGAGAAACAATT",1,8.55,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","T3A F167P",2
"lib1","SARS-CoV-2","AAGTAGAGAGCTGAAT",3,1.15,NA,NA,NA,NA,NA,NA,"stop","T63* G83W L183N",3
"lib1","SARS-CoV-2","AAGTAGAGCAAACGCC",3,20.61,10.78,0.02,0.12,2.93,1.01,0.01,"1 nonsynonymous","K26R",1
"lib1","SARS-CoV-2","AAGTAGAGCAAATGCG",3,46.81,9.95,-0.82,0.11,2.7,1.05,0.01,">1 nonsynonymous","S45L I138M",2
"lib1","SARS-CoV-2","AAGTAGATAAATAACA",6,23.51,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44Q T85K D90T T148S P177S",5
"lib1","SARS-CoV-2","AAGTAGATTAAAGGCA",5,190.87,10.74,-0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTAGATTCCAACAT",6,67.29,10.57,-0.19,0.09,2.85,1.08,0,"1 nonsynonymous","Y178V",1
"lib1","SARS-CoV-2","AAGTAGCAAAACTCAT",5,115.76,9.23,-1.53,0.05,2.84,1.08,0,"1 nonsynonymous","Q163D",1
"lib1","SARS-CoV-2","AAGTAGCAAATAATGA",3,12.74,10.69,-0.08,0.1,2.88,1.07,0,">1 nonsynonymous","C61I Q168F",2
"lib1","SARS-CoV-2","AAGTAGCACCTAATTG",4,5.83,NA,NA,NA,NA,NA,NA,"stop","S43R I88* N109* K114I N120K",5
"lib1","SARS-CoV-2","AAGTAGCATGGCCGCA",2,51.67,10.05,-0.72,0.1,2.59,1.05,0,">1 nonsynonymous","Y123C S129V P149S",3
"lib1","SARS-CoV-2","AAGTAGCCCCACAAAA",1,17.3,9.55,-1.21,0.25,2.05,1.14,0.04,">1 nonsynonymous","V37M P96T N110C",3
"lib1","SARS-CoV-2","AAGTAGCCCGCTCCCA",7,235.15,10.71,-0.06,0.05,2.93,1.05,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","AAGTAGCCCTCATTCG",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52G N110P K114F P133Q E154G",5
"lib1","SARS-CoV-2","AAGTAGCCGAACTAGA",3,21.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50V S53T D90L",3
"lib1","SARS-CoV-2","AAGTAGCCGGCCCACA",10,51.97,6.07,-4.69,0.4,1.5,1.12,0,">1 nonsynonymous","F99Q N120K L131G V173S",4
"lib1","SARS-CoV-2","AAGTAGCCTTCAGATT",1,16.41,9.81,-0.95,0.11,2.37,1.01,0.01,">1 nonsynonymous","N64G T140G G155D",3
"lib1","SARS-CoV-2","AAGTAGCGCCGCAGGC",3,43.38,10.35,-0.41,0.1,2.6,1,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","AAGTAGCTAGCACATA",4,33.07,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D75R T85Y G117R F167N",4
"lib1","SARS-CoV-2","AAGTAGCTTTGATACT",2,41.38,6.5,-4.27,0.65,1.5,1.18,0.04,">1 nonsynonymous","C49L V71R N171G T201S",4
"lib1","SARS-CoV-2","AAGTAGGGCTGTAGGT",7,3.03,NA,NA,NA,NA,NA,NA,"stop","N92W C158*",2
"lib1","SARS-CoV-2","AAGTAGGTAATGAGTT",5,2.01,NA,NA,NA,NA,NA,NA,"stop","S41T S43R L131*",3
"lib1","SARS-CoV-2","AAGTAGGTTATAACCG",2,137.77,7.27,-3.49,0.08,2.06,1.12,0,">1 nonsynonymous","S45D D59Q Y143I F156C",4
"lib1","SARS-CoV-2","AAGTAGTACCCGCCAA",1,26.19,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R16L Q84M L95R N107H",4
"lib1","SARS-CoV-2","AAGTAGTAGGATTACA",15,82.23,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C61I D97S D112C",3
"lib1","SARS-CoV-2","AAGTAGTGTACCAAGA",2,57.54,9.99,-0.78,0.09,2.43,1.02,0,">1 nonsynonymous","Y123W G146H",2
"lib1","SARS-CoV-2","AAGTAGTTAATGGGAG",2,10.12,8.83,-1.94,0.3,2.61,1.14,0.03,">1 nonsynonymous","T170H G174V",2
"lib1","SARS-CoV-2","AAGTAGTTTAACAATA",2,57.69,10.57,-0.19,0.1,2.88,1.09,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","AAGTAGTTTACCATTT",2,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W G101R S113L F160P",4
"lib1","SARS-CoV-2","AAGTATAAAATAAATC",5,47.54,10.81,0.05,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATAAAATAAGAA",4,74.71,9.9,-0.86,0.04,2.75,1.08,0,">1 nonsynonymous","S41I E141S G174R",3
"lib1","SARS-CoV-2","AAGTATAAAATACAAG",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L Q84K G101V Y121N Q168R",5
"lib1","SARS-CoV-2","AAGTATAACTAACGCG",4,65.3,10.69,-0.07,0.08,2.71,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATAAGGGGGACC",3,58.48,10.6,-0.16,0.06,2.87,1.05,0,">1 nonsynonymous","V32I V37E K87R L188H",4
"lib1","SARS-CoV-2","AAGTATAAGTGTCATT",6,105.53,10.8,0.04,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATACAGGAGGGA",4,65.82,10.69,-0.07,0.06,2.88,1.09,0,"1 nonsynonymous","T3G",1
"lib1","SARS-CoV-2","AAGTATACATTCACAA",2,4.97,NA,NA,NA,NA,NA,NA,"stop","D97S S129* F167M",3
"lib1","SARS-CoV-2","AAGTATACTCCACGGT",5,24.28,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D68Q D97V K114W",3
"lib1","SARS-CoV-2","AAGTATAGATTATCTT",10,7.56,10.48,-0.28,0.22,2.22,1,0.03,">1 nonsynonymous","L38T L131P K199L",3
"lib1","SARS-CoV-2","AAGTATAGCTGACGTT",3,0.84,NA,NA,NA,NA,NA,NA,"stop","A14* C49I L95A G155T",4
"lib1","SARS-CoV-2","AAGTATAGCTGCGCGA",11,72.11,8.4,-2.36,0.13,1.74,1.1,0.01,">1 nonsynonymous","E10F N118H S164Y",3
"lib1","SARS-CoV-2","AAGTATAGGATAGGTA",3,14.61,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V52L A89F N92Y N157F",4
"lib1","SARS-CoV-2","AAGTATAGTAGTAGGT",5,0.62,NA,NA,NA,NA,NA,NA,"stop","R127S K132*",2
"lib1","SARS-CoV-2","AAGTATATAATCAAGC",4,43.55,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14G P82A N120V K132Y",4
"lib1","SARS-CoV-2","AAGTATATCGTACTCT",9,96.02,10.77,0,0.06,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATATGAATTCAA",1,18.76,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N1Q Y39R S45R C158S F167S H189D",6
"lib1","SARS-CoV-2","AAGTATATGACGAAGG",5,7.86,6.93,-3.84,0.57,3,1.19,0.01,">1 nonsynonymous","N1L G83V S129L P149W",4
"lib1","SARS-CoV-2","AAGTATATGGATAGAA",5,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125S F134M F160L",3
"lib1","SARS-CoV-2","AAGTATATTACGTGAA",12,93.63,6,-4.76,1.24,1.5,1.16,0.01,">1 nonsynonymous","T55S G83N N107V Y143V C150K T201H",6
"lib1","SARS-CoV-2","AAGTATATTTAAGCAT",2,12.04,10.87,0.11,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATCAAAAAAGGA",6,174.08,9.84,-0.93,0.05,2.87,1.05,0,"1 nonsynonymous","Y119K",1
"lib1","SARS-CoV-2","AAGTATCACTTTCGTG",9,1.65,NA,NA,NA,NA,NA,NA,"stop","C6W C61K D68* G74V G83* K94I Y123Q Q144P V181T T201I",10
"lib1","SARS-CoV-2","AAGTATCCATTGATCT",2,1.68,NA,NA,NA,NA,NA,NA,"stop","G86W Q176*",2
"lib1","SARS-CoV-2","AAGTATCCCTGGTGAC",8,54.57,10.16,-0.6,0.11,2.37,1,0,">1 nonsynonymous","L57P N64G",2
"lib1","SARS-CoV-2","AAGTATCCTATCATCT",2,42.79,10.34,-0.42,0.16,2.61,1.03,0.01,">1 nonsynonymous","A14V N64E K199N",3
"lib1","SARS-CoV-2","AAGTATCGATGCATTT",12,61.72,6.18,-4.59,0.74,1.5,1.24,0.03,">1 nonsynonymous","P96L W106L D137V G152C",4
"lib1","SARS-CoV-2","AAGTATCGTAGACCAA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","L5K C61* A81G V115W",4
"lib1","SARS-CoV-2","AAGTATGAAAGAAGAC",4,56.9,10.77,0.01,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATGAAGAAATCC",2,1.38,NA,NA,NA,NA,NA,NA,"stop","N120I R136H G146S S164L Y178*",5
"lib1","SARS-CoV-2","AAGTATGAATATACAC",2,31.62,10.72,-0.04,0.11,2.92,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATGACAGATACC",3,18.85,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D112P E135Y F156V",3
"lib1","SARS-CoV-2","AAGTATGACATTTAGA",4,61.83,6,-4.76,2,3,1.23,0,">1 nonsynonymous","I28R N107K E154H",3
"lib1","SARS-CoV-2","AAGTATGACTTAACTT",5,15.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86I Y119S",2
"lib1","SARS-CoV-2","AAGTATGATAACGATG",6,180.96,10.71,-0.05,0.04,2.9,1.07,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","AAGTATGCACGCGAAC",2,29.98,10.74,-0.03,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATGCCCACAGGC",3,10.92,8.54,-2.22,0.26,2.49,1.05,0.03,">1 nonsynonymous","N157Y P197G",2
"lib1","SARS-CoV-2","AAGTATGCTAATAATG",2,25.61,6.98,-3.79,0.2,1.5,1.16,0.01,">1 nonsynonymous","I2K K26H C61L R124K T201A",5
"lib1","SARS-CoV-2","AAGTATGCTGAGGACT",2,30.8,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N58A N64M C102W G117R F160V",5
"lib1","SARS-CoV-2","AAGTATGGCACTGTCA",8,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S R25K K48F I138W F156D T201R",6
"lib1","SARS-CoV-2","AAGTATGGCAGCAGCA",5,30.22,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K94I A105L E141N",3
"lib1","SARS-CoV-2","AAGTATGTGAGCTTGA",5,88.03,10.77,0,0.07,2.93,1.05,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","AAGTATGTGCACAAAA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C N64V I104V V115F C150Y L162Q",6
"lib1","SARS-CoV-2","AAGTATTAAAATGTTA",1,24.45,9.67,-1.1,0.1,2.8,1.07,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","AAGTATTACAACTACT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51W I80K P169L",3
"lib1","SARS-CoV-2","AAGTATTAGAGGTCAA",3,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C S41M I104S C158R K199T",5
"lib1","SARS-CoV-2","AAGTATTAGCTTTGCC",7,119.77,10.54,-0.22,0.06,2.9,1.02,0,">1 nonsynonymous","F8Y P54T",2
"lib1","SARS-CoV-2","AAGTATTATAAGCTTA",2,18.23,10.89,0.12,0.09,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTATTCAAGACATA",3,51.05,9.33,-1.44,0.13,1.77,1.13,0.01,">1 nonsynonymous","F17I G83L",2
"lib1","SARS-CoV-2","AAGTATTGACGAGACA",1,14.28,10.07,-0.7,0.1,2.43,1,0.01,">1 nonsynonymous","A18T A42S N58E N151L A190H",5
"lib1","SARS-CoV-2","AAGTATTGTATATACA",5,23.19,6,-4.76,2,3,1.08,0,">1 nonsynonymous","C61M L95E I142Q N151I",4
"lib1","SARS-CoV-2","AAGTATTGTGGTGTAA",1,15.4,7.73,-3.04,0.26,1.6,1.15,0.03,">1 nonsynonymous","V52G L57N D90S",3
"lib1","SARS-CoV-2","AAGTATTTATGAATTG",1,23.81,6.37,-4.4,0.37,1.5,1.1,0.01,">1 nonsynonymous","V20L N107S V173I",3
"lib1","SARS-CoV-2","AAGTATTTCCCCTAAC",1,7.36,9.97,-0.8,0.21,2.59,1.21,0.02,">1 nonsynonymous","K48L V65R F160H V173L",4
"lib1","SARS-CoV-2","AAGTATTTCGTCCAAT",1,22.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V32W C61K F99S F160I",4
"lib1","SARS-CoV-2","AAGTATTTTTAAAGCT",1,5.38,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G86L N120L E154H V194A",4
"lib1","SARS-CoV-2","AAGTCAAAAAAAACGC",3,43.36,10.6,-0.16,0.05,2.94,1,0,">1 nonsynonymous","P149G Q163L",2
"lib1","SARS-CoV-2","AAGTCAAAAGCCTCTA",5,44.01,6,-4.76,0.79,1.94,1.11,0,">1 nonsynonymous","G86T A105L",2
"lib1","SARS-CoV-2","AAGTCAAAAGTCAAAT",5,25.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23M D97P L131K",3
"lib1","SARS-CoV-2","AAGTCAAACAGCATCC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","S19* F44Q C61E",3
"lib1","SARS-CoV-2","AAGTCAAACTTTGAAG",5,54.68,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44R A105P",2
"lib1","SARS-CoV-2","AAGTCAAAGCATACCC",2,2.54,NA,NA,NA,NA,NA,NA,"stop","C6* Y35H G86S E141F N157D",5
"lib1","SARS-CoV-2","AAGTCAAATGTAACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","V37L G51* P96T G101Y E186F",5
"lib1","SARS-CoV-2","AAGTCAACCCTTGGTT",3,15.88,6,-4.76,2,1.5,1.27,0.08,"1 nonsynonymous","N92H",1
"lib1","SARS-CoV-2","AAGTCAACGAAAAACC",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H P149Q R179M",3
"lib1","SARS-CoV-2","AAGTCAACGTAAACTG",2,34.33,10.66,-0.1,0.06,2.98,1,0,"1 nonsynonymous","C195F",1
"lib1","SARS-CoV-2","AAGTCAAGCAAAAATA",3,25.03,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","N1Q T55C D68K N107F Q168H",5
"lib1","SARS-CoV-2","AAGTCAAGCGCAGCTT",6,41.53,10.67,-0.1,0.04,2.96,1,0,">1 nonsynonymous","P149T G152D",2
"lib1","SARS-CoV-2","AAGTCAATAATAAACT",3,29.29,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N107Y L162P",2
"lib1","SARS-CoV-2","AAGTCAATAGTCCTCA",1,17.62,6.99,-3.77,0.47,1.5,1.07,0.06,">1 nonsynonymous","L38F G86K N120K A145S T170S",5
"lib1","SARS-CoV-2","AAGTCAATGCCTAATT",2,46.56,7.95,-2.81,0.37,1.5,1.05,0.04,">1 nonsynonymous","F17E Y119T",2
"lib1","SARS-CoV-2","AAGTCAATGGATAAGC",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S D97K",2
"lib1","SARS-CoV-2","AAGTCACAAAAAGGAA",4,13.89,6,-4.76,2,3,1.25,0.05,">1 nonsynonymous","A14N E76V I88T D98N K199P",5
"lib1","SARS-CoV-2","AAGTCACACACAAAGG",4,53.58,10.54,-0.22,0.04,2.97,1,0,">1 nonsynonymous","E10M T201R",2
"lib1","SARS-CoV-2","AAGTCACAGTAACCTT",4,1.28,NA,NA,NA,NA,NA,NA,"stop","Y35* F44Y I88Y L95R Y143N",5
"lib1","SARS-CoV-2","AAGTCACATAAAAATA",2,20.07,9.61,-1.15,0.14,2.03,1.13,0.01,"1 nonsynonymous","L162H",1
"lib1","SARS-CoV-2","AAGTCACCAAAAACAG",2,25.97,8.51,-2.25,0.15,3,1,0.01,">1 nonsynonymous","K114N S129R Q168T G174T",4
"lib1","SARS-CoV-2","AAGTCACCTGTGTAAG",1,86.87,10.76,-0.01,0.09,2.81,1.06,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","AAGTCACTACATTACT",6,50.71,9.44,-1.33,0.15,2.14,1.13,0.01,"1 nonsynonymous","N107V",1
"lib1","SARS-CoV-2","AAGTCACTATTAAAGC",1,24.22,10.77,0.01,0.09,2.88,1.05,0,">1 nonsynonymous","T3A N110A",2
"lib1","SARS-CoV-2","AAGTCACTGAAGTAAA",5,12.15,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50G K56F D98I I104S E141M",5
"lib1","SARS-CoV-2","AAGTCACTTGCTTGAA",8,38.79,8.52,-2.25,0.29,1.5,1.08,0.03,">1 nonsynonymous","F99I G174W K199N",3
"lib1","SARS-CoV-2","AAGTCAGACTTGCCCA",7,117.65,6.08,-4.68,0.54,1.5,1.16,0.01,">1 nonsynonymous","G86L N118Y L162K Q168N",4
"lib1","SARS-CoV-2","AAGTCAGTAAATAATA",3,35.75,9.25,-1.52,0.09,2.7,1.15,0,">1 nonsynonymous","R73L R78E",2
"lib1","SARS-CoV-2","AAGTCAGTGTACACTG",2,0.73,NA,NA,NA,NA,NA,NA,"stop","C6* K56P T63P W106V",4
"lib1","SARS-CoV-2","AAGTCATAAAAGACAG",1,6.29,9.98,-0.78,0.24,2.2,1.03,0.02,">1 nonsynonymous","D90C S184R",2
"lib1","SARS-CoV-2","AAGTCATACAAGACAT",4,0.33,NA,NA,NA,NA,NA,NA,"stop","K48* P96*",2
"lib1","SARS-CoV-2","AAGTCATACATACAGC",3,19.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","AAGTCATCATCACGGC",6,23.54,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D98Y A105D N120H K199Q",4
"lib1","SARS-CoV-2","AAGTCATCCCGCTATG",3,25.65,8.84,-1.92,0.13,1.99,1.16,0.01,">1 nonsynonymous","V37A L60V N107H K199M",4
"lib1","SARS-CoV-2","AAGTCATGACCAAACA",1,19.09,10.41,-0.35,0.08,2.96,1,0,"1 nonsynonymous","K26W",1
"lib1","SARS-CoV-2","AAGTCATGGTAACCTA",5,136.01,10.67,-0.1,0.05,2.89,1.03,0,">1 nonsynonymous","T63Y L122F",2
"lib1","SARS-CoV-2","AAGTCATGTCATTACG",2,12.92,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","I2N S19W D59I D98P N157C",5
"lib1","SARS-CoV-2","AAGTCATTACTTCAAA",1,13.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1T E10R D34I G152R",4
"lib1","SARS-CoV-2","AAGTCCAAACCTCTCA",4,54.6,10.75,-0.02,0.06,2.82,1.15,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","AAGTCCAAACGACCAG",7,172.88,10.54,-0.23,0.03,2.92,1.03,0,">1 nonsynonymous","R78T D90M",2
"lib1","SARS-CoV-2","AAGTCCAAAGGAATAA",7,69.76,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T55I N64T Q84R P177R",4
"lib1","SARS-CoV-2","AAGTCCAAATTCGCGA",2,20.38,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","Y21T S41Y F44S D112N",4
"lib1","SARS-CoV-2","AAGTCCAATATCTGCA",4,39.41,6.83,-3.93,0.56,1.5,1.16,0.05,">1 nonsynonymous","G9D C49R D98L N107T A145V",5
"lib1","SARS-CoV-2","AAGTCCAATATTACAA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H C49Y K114I L183K",4
"lib1","SARS-CoV-2","AAGTCCACAAAAACCT",8,10.55,11.05,0.29,0.27,2.59,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGTCCACCCAAGGAT",6,153.87,10.7,-0.06,0.05,2.9,1.05,0,">1 nonsynonymous","S43L I138E Q163S",3
"lib1","SARS-CoV-2","AAGTCCACCGATTCGG",9,42.6,6,-4.76,2,3,1.22,0.01,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","AAGTCCACGAAATTGT",1,1.65,NA,NA,NA,NA,NA,NA,"stop","T15Y D90R D98*",3
"lib1","SARS-CoV-2","AAGTCCAGCGGCCGAT",7,22.89,6,-4.76,2,3,1.17,0,">1 nonsynonymous","K48G V103F Q144H",3
"lib1","SARS-CoV-2","AAGTCCAGTATGGGTT",14,242.41,10.55,-0.21,0.03,2.94,1.02,0,"1 nonsynonymous","G9I",1
"lib1","SARS-CoV-2","AAGTCCATCTTGTTCC",11,133.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31T S45D L95M S139I",4
"lib1","SARS-CoV-2","AAGTCCATTAAAAGCG",1,47.12,10.18,-0.59,0.04,2.81,1.08,0,">1 nonsynonymous","R16P N151L",2
"lib1","SARS-CoV-2","AAGTCCCTCACGACAT",3,51.37,10.77,0.01,0.08,2.83,1.13,0,">1 nonsynonymous","A42G L122F",2
"lib1","SARS-CoV-2","AAGTCCGAAATCCCAA",3,5.93,9.2,-1.57,0.41,1.75,1.14,0.05,">1 nonsynonymous","D59R G83L Y121S",3
"lib1","SARS-CoV-2","AAGTCCGACAGGACTA",3,11.03,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L57S P96Y G101M W106Y N130R",5
"lib1","SARS-CoV-2","AAGTCCGACTATACAC",4,70.49,10.72,-0.05,0.06,2.91,1.07,0,">1 nonsynonymous","N1M C61A",2
"lib1","SARS-CoV-2","AAGTCCGCACTAGATT",3,20.74,9.26,-1.5,0.27,1.5,1.1,0.04,">1 nonsynonymous","Y121D A190S",2
"lib1","SARS-CoV-2","AAGTCCGCGCTATACT",1,11.18,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","I88K K128T Q168L",3
"lib1","SARS-CoV-2","AAGTCCGGTCTAATAA",2,101.82,10.68,-0.09,0.07,2.86,1.05,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","AAGTCCGTTTTCTCGC",1,1.6,NA,NA,NA,NA,NA,NA,"stop","D112W S147*",2
"lib1","SARS-CoV-2","AAGTCCTACTACCCAG",2,30.34,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","W23D W106C",2
"lib1","SARS-CoV-2","AAGTCCTAGCACGGTA",2,52.34,10.6,-0.16,0.08,2.89,1,0,">1 nonsynonymous","T140W T201L",2
"lib1","SARS-CoV-2","AAGTCCTCACAATCTT",1,27.41,10.08,-0.69,0.15,2.4,1.03,0.01,">1 nonsynonymous","C6Y S36P V37K",3
"lib1","SARS-CoV-2","AAGTCGAAATACTGCA",5,1.11,NA,NA,NA,NA,NA,NA,"stop","N13G S19K D97N N157I Y178*",5
"lib1","SARS-CoV-2","AAGTCGAACTATAGAC",5,215.13,7.12,-3.65,0.12,1.5,1.13,0,">1 nonsynonymous","A18S F160E Q176V",3
"lib1","SARS-CoV-2","AAGTCGAATAATTACA",8,25.27,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V103Q K114N S139Y",3
"lib1","SARS-CoV-2","AAGTCGACACTCAGGG",1,62.06,10.06,-0.71,0.09,2.58,1.05,0,"1 nonsynonymous","V180L",1
"lib1","SARS-CoV-2","AAGTCGACCCTTCAAT",1,18.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C61E D112R R136M N157L S164A",5
"lib1","SARS-CoV-2","AAGTCGAGTTTAAATC",1,8.57,10.47,-0.29,0.18,2.74,1.25,0.02,">1 nonsynonymous","T3H G9S",2
"lib1","SARS-CoV-2","AAGTCGATCCCAGCGT",3,90.05,10.77,0.01,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTCGCGCAAAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* S36* K87V V115S S129E P161A",6
"lib1","SARS-CoV-2","AAGTCGCGCGTGCCTC",9,65.1,9.55,-1.22,0.15,1.77,1.14,0.01,">1 nonsynonymous","F8Y T63R D90S P96N",4
"lib1","SARS-CoV-2","AAGTCGCGTTCTCAAA",4,40.92,10.68,-0.08,0.07,2.96,1,0,">1 nonsynonymous","K48E D97L",2
"lib1","SARS-CoV-2","AAGTCGCTAAATTGTG",3,21.73,10.63,-0.13,0.08,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTCGGAGGAATCAA",2,31.72,6,-4.76,1.87,1.5,1.2,0.02,">1 nonsynonymous","N92T V173E T201S",3
"lib1","SARS-CoV-2","AAGTCGGTGGTTCGAT",1,17.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G101T A105L T140G",3
"lib1","SARS-CoV-2","AAGTCGGTGTTCCTCA",9,57.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Q A105L Y143F",3
"lib1","SARS-CoV-2","AAGTCGTAGTAGCCTC",3,39.55,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N30V P54R N109G I142Y P191S G196W",6
"lib1","SARS-CoV-2","AAGTCGTTAAATAAAA",9,72.28,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5S A14I G83L R179N",4
"lib1","SARS-CoV-2","AAGTCGTTGTCAAGTA",5,68.73,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9K E76T D112Y",3
"lib1","SARS-CoV-2","AAGTCTAAAGGCCGGA",6,58.47,9.66,-1.1,0.21,1.57,1.13,0.02,">1 nonsynonymous","G83A D98I L162V",3
"lib1","SARS-CoV-2","AAGTCTAAATCAAGAA",3,29.51,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","V103W G174S",2
"lib1","SARS-CoV-2","AAGTCTAAATGGGTAG",4,1.86,NA,NA,NA,NA,NA,NA,"stop","A14P K128T R136L N151*",4
"lib1","SARS-CoV-2","AAGTCTAAGTTGACAT",3,167.02,10.8,0.03,0.07,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTCTAATAGTAAAA",2,47.48,9.15,-1.62,0.2,2.47,1.25,0.01,">1 nonsynonymous","T3G A42D G117P",3
"lib1","SARS-CoV-2","AAGTCTAATTACTTTG",6,94.42,10.74,-0.03,0.06,2.9,1.03,0,">1 nonsynonymous","F185L P197A",2
"lib1","SARS-CoV-2","AAGTCTACCATTACCA",4,93.69,6,-4.76,2,3,1.18,0,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","AAGTCTACTAAAAACT",6,112.61,10.67,-0.1,0.04,2.89,1.01,0,">1 nonsynonymous","N1Y G152S",2
"lib1","SARS-CoV-2","AAGTCTAGCCGTCAAT",4,26.68,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y93R F134N",2
"lib1","SARS-CoV-2","AAGTCTAGCCTACACG",6,24.37,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","A42T G51Y R73Y K94D",4
"lib1","SARS-CoV-2","AAGTCTAGGCAGGTAA",1,27.02,10.74,-0.03,0.05,2.91,1.08,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","AAGTCTAGGCCTTAGA",2,37.51,10.55,-0.21,0.06,2.89,1.04,0,"1 nonsynonymous","L60D",1
"lib1","SARS-CoV-2","AAGTCTATCAGTCTGG",8,215.16,10.08,-0.68,0.05,2.9,1.02,0,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","AAGTCTATTGGAATAA",6,45.62,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K87N D137S Y165W",3
"lib1","SARS-CoV-2","AAGTCTCACATTATCA",4,2.8,NA,NA,NA,NA,NA,NA,"stop","I2W F8K F134*",3
"lib1","SARS-CoV-2","AAGTCTCCCAAAGCAT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","S29A S41I L122*",3
"lib1","SARS-CoV-2","AAGTCTCGTAAAGTGT",1,0.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","H189I",1
"lib1","SARS-CoV-2","AAGTCTCTGTACAACA",8,38.4,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","AAGTCTCTTAGTATGT",1,1.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","AAGTCTGACAAGGCTT",1,51.02,10.82,0.06,0.1,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTCTGAGATCTTGG",3,40.22,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2A R16E G86C G101V D112L G196M",6
"lib1","SARS-CoV-2","AAGTCTGAGTGGGTTT",1,5.54,8.65,-2.12,0.15,2.39,1,0.02,"1 nonsynonymous","P161D",1
"lib1","SARS-CoV-2","AAGTCTGATGGAGACG",3,10.56,8.72,-2.05,0.13,2.07,1.08,0,">1 nonsynonymous","S139R P177S",2
"lib1","SARS-CoV-2","AAGTCTGATTACATAC",3,2.92,NA,NA,NA,NA,NA,NA,"stop","Y21M Y93A A105*",3
"lib1","SARS-CoV-2","AAGTCTGGACGTGCTG",3,1.59,NA,NA,NA,NA,NA,NA,"stop","P54Q N107G G116*",3
"lib1","SARS-CoV-2","AAGTCTGTACTGCAAT",3,24.03,7.01,-3.75,0.51,1.5,1.09,0.07,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","AAGTCTGTTTATCTCT",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N Y66L Y93G K128L A190R",5
"lib1","SARS-CoV-2","AAGTCTTATGGATGAG",1,33.34,9.36,-1.41,0.1,2.8,1.06,0,">1 nonsynonymous","R78P N110L G146R",3
"lib1","SARS-CoV-2","AAGTCTTTAAACTCGT",2,37.11,9.8,-0.96,0.04,2.91,1.06,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","AAGTCTTTACAGCGTG",2,107.72,10.22,-0.54,0.05,2.67,1.05,0,">1 nonsynonymous","A105Y G146S",2
"lib1","SARS-CoV-2","AAGTGAAAACTACGCA",6,15.54,6,-4.76,2,1.5,1.13,0.08,">1 nonsynonymous","T15E A33G V103L S113N",4
"lib1","SARS-CoV-2","AAGTGAAAAGATTACA",7,66.14,9.91,-0.86,0.11,2.28,1.02,0,"1 nonsynonymous","V181M",1
"lib1","SARS-CoV-2","AAGTGAAACAAATGGG",4,43.9,10.81,0.04,0.07,2.95,1.03,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","AAGTGAAAGAAACTAA",1,59.35,10.78,0.02,0.07,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGAAATGGATTGC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","R16D I104*",2
"lib1","SARS-CoV-2","AAGTGAAATTACCCGA",3,37.72,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68K A81T P133S",3
"lib1","SARS-CoV-2","AAGTGAAGAGAAGAAT",1,15.2,10.15,-0.61,0.14,2.88,1,0.01,">1 nonsynonymous","P96R L125M",2
"lib1","SARS-CoV-2","AAGTGAAGGGCCGTGG",5,115.24,6.04,-4.72,0.44,1.5,1.11,0,">1 nonsynonymous","S45T N64V I138V N157R Y165H",5
"lib1","SARS-CoV-2","AAGTGAAGTTGTCCCA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","AAGTGAATAACTGAAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib1","SARS-CoV-2","AAGTGAATGATATTTC",1,36.48,9.52,-1.25,0.1,2.43,1.11,0,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","AAGTGACAAGATAATG",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","AAGTGACAATGACTTT",3,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49P N58A D97G G146P F156I",5
"lib1","SARS-CoV-2","AAGTGACACAATCATA",2,79.87,10.77,0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGACACAGCCACC",1,0.52,NA,NA,NA,NA,NA,NA,"stop","V11R G86* Y178H",3
"lib1","SARS-CoV-2","AAGTGACAGTTTGTTG",3,80.84,9.94,-0.82,0.1,2.5,1.03,0,">1 nonsynonymous","N30W D90Y L188D",3
"lib1","SARS-CoV-2","AAGTGACCCACACATG",3,0.35,NA,NA,NA,NA,NA,NA,"stop","S36K G83* Y121* V173K R179G",5
"lib1","SARS-CoV-2","AAGTGACCCGGATTAA",13,184.58,10.77,0,0.06,2.86,1.03,0,">1 nonsynonymous","I2S K56G",2
"lib1","SARS-CoV-2","AAGTGACCGCTCCCTC",3,47.33,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29Y P82T R127V K132F T201R",5
"lib1","SARS-CoV-2","AAGTGACGAATCACAT",1,20.26,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A89H Y165G G174L",3
"lib1","SARS-CoV-2","AAGTGACGGCAACCAC",1,31.93,6,-4.76,1.94,1.5,1.14,0.01,">1 nonsynonymous","I2F S45A T63S F70S",4
"lib1","SARS-CoV-2","AAGTGACTCCTCGGCG",13,875.2,10.71,-0.06,0.04,2.94,1.02,0,">1 nonsynonymous","V37W G116S",2
"lib1","SARS-CoV-2","AAGTGAGCAAGTTTAT",1,36.4,10.54,-0.23,0.06,2.89,1.07,0,"1 nonsynonymous","K128I",1
"lib1","SARS-CoV-2","AAGTGAGCATGCCATG",5,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K S29L P54A G101S E135W G174V",6
"lib1","SARS-CoV-2","AAGTGAGCGATTATAA",4,79.85,6,-4.76,1.93,1.5,1.14,0.01,">1 nonsynonymous","V52Q D68C N120S",3
"lib1","SARS-CoV-2","AAGTGAGGGTGCTCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66R A105V Y123G N151S",4
"lib1","SARS-CoV-2","AAGTGATAGGAAATTG",10,131.26,10.48,-0.28,0.05,2.85,1.05,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","AAGTGATATTAGAACA",6,137.58,10.04,-0.73,0.05,2.85,1.02,0,">1 nonsynonymous","L131F F156P",2
"lib1","SARS-CoV-2","AAGTGATATTATTGTC",7,59.72,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S36V N40I Q176M",3
"lib1","SARS-CoV-2","AAGTGATCCCTCTACC",2,23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H G101A",2
"lib1","SARS-CoV-2","AAGTGATGCGCGAAAC",4,92.99,10.69,-0.07,0.04,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGATGGGCAGGTT",2,32.25,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F62V P96S R127P F156D",4
"lib1","SARS-CoV-2","AAGTGATGTAATCAGT",3,24.52,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9V F17T T46P N120M",4
"lib1","SARS-CoV-2","AAGTGCAAAATTAGAG",1,9.19,10.61,-0.16,0.12,2.66,1.2,0.01,"1 nonsynonymous","L162I",1
"lib1","SARS-CoV-2","AAGTGCACCCCGATAA",1,56.54,10.68,-0.08,0.05,2.93,1.05,0,"1 nonsynonymous","V32A",1
"lib1","SARS-CoV-2","AAGTGCACGTCAAAAA",1,42.66,10.7,-0.07,0.09,2.81,1.06,0,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","AAGTGCAGATCAATAA",4,36.16,6.93,-3.83,0.48,1.5,1.1,0.05,">1 nonsynonymous","C6G C49L S69I L95H N157D Y175I",6
"lib1","SARS-CoV-2","AAGTGCAGGCCGGGGA",5,39.63,8.9,-1.86,0.13,2.51,1.13,0.01,">1 nonsynonymous","E135M Y143V",2
"lib1","SARS-CoV-2","AAGTGCAGTACATCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34*",1
"lib1","SARS-CoV-2","AAGTGCATAAACACAT",1,67.32,10.49,-0.27,0.08,2.82,1.15,0,">1 nonsynonymous","Q144S P197A",2
"lib1","SARS-CoV-2","AAGTGCATGCTAGCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G83V Y91* G116V K199S",4
"lib1","SARS-CoV-2","AAGTGCATTACACAAT",10,151.65,10.72,-0.04,0.06,2.9,1.07,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","AAGTGCCAGACGACCG",4,13.64,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","E10S Y39L V77E N107V",4
"lib1","SARS-CoV-2","AAGTGCCCCTACGAAG",3,1.1,NA,NA,NA,NA,NA,NA,"stop","N1* F44M N110V V173S",4
"lib1","SARS-CoV-2","AAGTGCCGCAATCATC",3,0.25,NA,NA,NA,NA,NA,NA,"stop","N1G V37A K48R K94T I104*",5
"lib1","SARS-CoV-2","AAGTGCCTGAACCAAA",2,23.77,8.28,-2.49,0.43,1.5,1.08,0.06,">1 nonsynonymous","I72S T100L",2
"lib1","SARS-CoV-2","AAGTGCCTGGGCCCAC",9,282.11,6,-4.76,1.49,1.5,1.13,0,">1 nonsynonymous","T3S Y39W K56R G116L P177F",5
"lib1","SARS-CoV-2","AAGTGCCTTAGAGATG",5,52.81,10.67,-0.1,0.04,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGCCTTCAAATGA",5,37.25,10.43,-0.33,0.1,2.88,1,0,"1 nonsynonymous","I104T",1
"lib1","SARS-CoV-2","AAGTGCGAGCACCCTA",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R P149I",2
"lib1","SARS-CoV-2","AAGTGCGAGCTATGTG",6,2.32,NA,NA,NA,NA,NA,NA,"stop","V77* L122* E141D",3
"lib1","SARS-CoV-2","AAGTGCTAGAAAAACA",4,69.61,8.94,-1.83,0.19,1.5,1.13,0.01,">1 nonsynonymous","C49F G51H",2
"lib1","SARS-CoV-2","AAGTGCTAGTACAAAT",5,16.43,7.37,-3.4,0.46,1.57,1.15,0.07,">1 nonsynonymous","Y50E T100N",2
"lib1","SARS-CoV-2","AAGTGCTCATCCCACT",4,14.4,10.74,-0.02,0.07,2.95,1.02,0,">1 nonsynonymous","N64S T85M",2
"lib1","SARS-CoV-2","AAGTGCTCATTCACTT",1,9.95,10.65,-0.11,0.06,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTGCTTTTCTTATA",2,1.76,NA,NA,NA,NA,NA,NA,"stop","L5R G51*",2
"lib1","SARS-CoV-2","AAGTGGAACAAAACCC",4,0.86,NA,NA,NA,NA,NA,NA,"stop","K56* A105T L183C",3
"lib1","SARS-CoV-2","AAGTGGACAGACCCGG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","N107R I142*",2
"lib1","SARS-CoV-2","AAGTGGAGCCGCTAAT",8,231.9,10.18,-0.58,0.04,2.81,1.01,0,">1 nonsynonymous","L5A S69W",2
"lib1","SARS-CoV-2","AAGTGGAGTGCAAACA",1,9.25,10.72,-0.04,0.17,2.81,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGGATAAACATAA",1,17.22,10.84,0.08,0.14,2.85,1,0.01,">1 nonsynonymous","A42P L111Y",2
"lib1","SARS-CoV-2","AAGTGGATACAAACGT",1,25.33,7.22,-3.54,0.33,1.5,1.06,0.04,">1 nonsynonymous","C6D D59R A145G G155F",4
"lib1","SARS-CoV-2","AAGTGGATCGCGGTCG",3,18.07,10.69,-0.08,0.07,2.85,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGGCAGCTATACT",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* D90H",2
"lib1","SARS-CoV-2","AAGTGGCGGACAACCT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63R G86T Y91S V103M",4
"lib1","SARS-CoV-2","AAGTGGCTACAAACTC",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P L38S A81E G146Q T201R",5
"lib1","SARS-CoV-2","AAGTGGGAACGCAACA",2,31.46,9.84,-0.92,0.07,2.97,1.01,0,"1 nonsynonymous","I142C",1
"lib1","SARS-CoV-2","AAGTGGGACTACAATT",14,174.77,9.68,-1.09,0.11,2.49,1.09,0,">1 nonsynonymous","Y121S V173F",2
"lib1","SARS-CoV-2","AAGTGGGCGATGACAA",2,9.79,9.98,-0.79,0.32,1.87,1.18,0.02,">1 nonsynonymous","G101C P197W",2
"lib1","SARS-CoV-2","AAGTGGGCTAGAGGTA",2,24.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C S45I L183T",3
"lib1","SARS-CoV-2","AAGTGGGTCCACATTA",3,24.63,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5N V37C Y123P",3
"lib1","SARS-CoV-2","AAGTGGTAAGAAGAAT",1,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D D90F N157Y",3
"lib1","SARS-CoV-2","AAGTGGTCACCCAGAC",2,14.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63K P96L S113E P149S T170P G174K T201R",7
"lib1","SARS-CoV-2","AAGTGTAAAAGAAATT",1,13.92,9.87,-0.89,0.28,1.89,1.03,0.03,">1 nonsynonymous","A81L T140S T201I",3
"lib1","SARS-CoV-2","AAGTGTAAACAGAAGT",4,9.77,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77E S108P G152H",3
"lib1","SARS-CoV-2","AAGTGTAAAGGAAAAA",9,107.25,10.7,-0.06,0.05,2.86,1.03,0,">1 nonsynonymous","T55A R78H",2
"lib1","SARS-CoV-2","AAGTGTAAAGGTAAAC",3,74.58,9.57,-1.19,0.12,1.95,1.05,0.01,">1 nonsynonymous","Y165N K199I",2
"lib1","SARS-CoV-2","AAGTGTAATAGACCCG",7,122.35,8.74,-2.02,0.33,1.5,1,0.05,">1 nonsynonymous","A14V C102L",2
"lib1","SARS-CoV-2","AAGTGTAATATTCCTG",12,2.83,NA,NA,NA,NA,NA,NA,"stop","F8* R124S Q144A G155N L162*",5
"lib1","SARS-CoV-2","AAGTGTAATGATTTAG",12,134.83,10.76,0,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGTACGTCGCTAT",15,233.26,9.94,-0.83,0.11,2.04,1.05,0.01,">1 nonsynonymous","L60T E141W S184F",3
"lib1","SARS-CoV-2","AAGTGTCAAAATCACC",1,56.84,10.15,-0.62,0.05,2.97,1.01,0,">1 nonsynonymous","T63I G174L",2
"lib1","SARS-CoV-2","AAGTGTCACACAGATA",1,36.25,10.53,-0.23,0.05,2.94,1.03,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","AAGTGTCCGAAGATGC",9,108.57,10.68,-0.08,0.04,2.89,1.06,0,">1 nonsynonymous","I28W A81R",2
"lib1","SARS-CoV-2","AAGTGTCGAATCTAGT",7,56.23,10.01,-0.75,0.13,1.92,1.1,0.01,">1 nonsynonymous","F17Q S200F",2
"lib1","SARS-CoV-2","AAGTGTCTAAGCCCAC",1,9.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G C49Y L122F",3
"lib1","SARS-CoV-2","AAGTGTGAGCCACAAA",7,0.49,NA,NA,NA,NA,NA,NA,"stop","P96* N151K",2
"lib1","SARS-CoV-2","AAGTGTGATGGCCTAC",1,6.16,10.25,-0.52,0.1,2.92,1.01,0,">1 nonsynonymous","P54T E135M Q163R",3
"lib1","SARS-CoV-2","AAGTGTGCTATGTTCC",3,74.78,10.6,-0.16,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTGTGGATATAAAT",4,108.68,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E154I F167L P177I",3
"lib1","SARS-CoV-2","AAGTGTTAAAGACTAC",2,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D N13I S41D N109K K128N",5
"lib1","SARS-CoV-2","AAGTGTTAAAGCGATC",7,39.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12L Y93A W106Q F134R Y165G",5
"lib1","SARS-CoV-2","AAGTGTTCAACGATGT",5,50.62,10.39,-0.37,0.12,2.88,1.03,0,">1 nonsynonymous","P7H C61P N120H",3
"lib1","SARS-CoV-2","AAGTGTTCCAGTAAGC",3,7.1,7.29,-3.48,0.62,1.5,1.13,0.05,">1 nonsynonymous","T3V V77E",2
"lib1","SARS-CoV-2","AAGTGTTGTATGTATT",5,84.23,8.27,-2.5,0.12,2.72,1.07,0.01,">1 nonsynonymous","A42Y L122Y G155D T170K",4
"lib1","SARS-CoV-2","AAGTTAAAAGTTAAAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AAGTTAAACAACCCTG",1,29.73,8.21,-2.56,0.43,1.5,1,0.08,">1 nonsynonymous","R25F F47K A81S Y119K",4
"lib1","SARS-CoV-2","AAGTTAAAGGTAAAAT",1,58.73,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","V37L T55R I80F S147F",4
"lib1","SARS-CoV-2","AAGTTAAAGTCCCTCC",4,5.85,NA,NA,NA,NA,NA,NA,"stop","G9V A89D I138*",3
"lib1","SARS-CoV-2","AAGTTAAATATAACCC",3,19.02,6.24,-4.52,0.38,1.5,1.04,0,">1 nonsynonymous","D90S Q144D Y178D",3
"lib1","SARS-CoV-2","AAGTTAAATATACGTG",13,107.06,10.77,0.01,0.14,2.85,1.1,0.01,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","AAGTTAAATCTATGTG",2,5.1,6.74,-4.02,0.67,1.5,1.11,0.06,">1 nonsynonymous","N30L S41A G83I W106R E141R",5
"lib1","SARS-CoV-2","AAGTTAAATTGATACA",4,41.98,10.46,-0.3,0.09,2.76,1.16,0,"1 nonsynonymous","S19N",1
"lib1","SARS-CoV-2","AAGTTAACCGTTAAGT",2,36.21,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S19E L95D",2
"lib1","SARS-CoV-2","AAGTTAACGACCGACA",6,117.69,9.14,-1.63,0.07,2.72,1.11,0,">1 nonsynonymous","Y143L F160V",2
"lib1","SARS-CoV-2","AAGTTAAGGAGCGAAC",1,24.94,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A81I T100C T170V",3
"lib1","SARS-CoV-2","AAGTTAAGTCATGTAT",2,2.63,NA,NA,NA,NA,NA,NA,"stop","F134* C158I",2
"lib1","SARS-CoV-2","AAGTTAAGTTGAACGA",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72L S184N",2
"lib1","SARS-CoV-2","AAGTTAATTACGTCAA",3,91.1,9.55,-1.21,0.13,1.89,1.11,0.01,">1 nonsynonymous","L57K Y178N",2
"lib1","SARS-CoV-2","AAGTTAATTCGTAATA",2,30.84,9.71,-1.05,0.37,1.5,1,0.05,">1 nonsynonymous","A89Q V173G",2
"lib1","SARS-CoV-2","AAGTTAATTTAGAGAT",4,54.84,9.6,-1.17,0.22,1.51,1.17,0.02,">1 nonsynonymous","N58S T63M W106I",3
"lib1","SARS-CoV-2","AAGTTACAAAGCCACC",2,24.57,10.06,-0.7,0.13,2.29,1.05,0.01,">1 nonsynonymous","P96T P149V",2
"lib1","SARS-CoV-2","AAGTTACAACGTACTT",3,57.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F47N D68A N92Q",3
"lib1","SARS-CoV-2","AAGTTACAAGACTCCC",2,17.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A22S P96S L131M S139H P161Q",5
"lib1","SARS-CoV-2","AAGTTACAGGATCCCC",6,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A A105P L183N",3
"lib1","SARS-CoV-2","AAGTTACAGGCATTGC",6,5.47,9.68,-1.08,0.56,2.1,1.06,0.07,">1 nonsynonymous","P54M I88M R127V P161C",4
"lib1","SARS-CoV-2","AAGTTACAGTTTTAAT",6,4.74,NA,NA,NA,NA,NA,NA,"stop","L5R A14* Q176T",3
"lib1","SARS-CoV-2","AAGTTACCAGAAATAC",10,2.33,NA,NA,NA,NA,NA,NA,"stop","N1L Y21K S29* N40A N151R P169S",6
"lib1","SARS-CoV-2","AAGTTACCCCTCCTTC",6,27.73,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","T15S G86R F99S P161H Y175H",5
"lib1","SARS-CoV-2","AAGTTACCCTACTCTC",6,100.91,10.38,-0.38,0.03,2.87,1.02,0,">1 nonsynonymous","A42L T85D",2
"lib1","SARS-CoV-2","AAGTTACCCTTGGCGC",2,56.72,8.37,-2.4,0.11,2.94,1.05,0.01,"1 nonsynonymous","F126S",1
"lib1","SARS-CoV-2","AAGTTACCGACTAATA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","C6T A81* C158A",3
"lib1","SARS-CoV-2","AAGTTACGTAACGGTT",5,4.13,NA,NA,NA,NA,NA,NA,"stop","N30L S36W T140* F167Q P177*",5
"lib1","SARS-CoV-2","AAGTTACTCTTCAGAA",2,22.26,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2R Y50S F62M I88R",4
"lib1","SARS-CoV-2","AAGTTACTCTTGACCG",4,39.98,10.67,-0.1,0.06,2.85,1.11,0,"1 nonsynonymous","T148H",1
"lib1","SARS-CoV-2","AAGTTAGAACGCATAG",5,11.16,NA,NA,NA,NA,NA,NA,"stop","F8* K26W L38Y N64D A89M L122R",6
"lib1","SARS-CoV-2","AAGTTAGACCTACTGG",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D Y123R",2
"lib1","SARS-CoV-2","AAGTTAGCCGATATAA",2,29.18,7.09,-3.67,0.3,1.5,1.02,0.02,">1 nonsynonymous","E10M L95F W106T P197K S200V",5
"lib1","SARS-CoV-2","AAGTTAGCCTATGCTG",2,93.16,8.24,-2.52,0.12,2.66,1.09,0.01,">1 nonsynonymous","F8L Y175R",2
"lib1","SARS-CoV-2","AAGTTAGCTAGACCGG",1,13.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q A33S F99P L122A I138E R179G",6
"lib1","SARS-CoV-2","AAGTTAGGCGACCTTG",6,56.98,8.64,-2.12,0.11,2.21,1.09,0,">1 nonsynonymous","N107K Q168L",2
"lib1","SARS-CoV-2","AAGTTATAGAATAAGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F P54T N107F",3
"lib1","SARS-CoV-2","AAGTTATCAATTGTTT",4,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P T55P G101N",3
"lib1","SARS-CoV-2","AAGTTATCATTTAGTG",12,127.17,6,-4.76,1.09,1.5,1.18,0.01,">1 nonsynonymous","S19G C61I K87P N157V Y178T",5
"lib1","SARS-CoV-2","AAGTTATGTATTTTGT",9,90.79,6,-4.76,1.29,1.5,1.14,0,">1 nonsynonymous","A42T F44D L60G D97C Y143I C150E Q163V",7
"lib1","SARS-CoV-2","AAGTTATTGGAGGCGT",2,1.85,NA,NA,NA,NA,NA,NA,"stop","L38I L95M W106E Y175*",4
"lib1","SARS-CoV-2","AAGTTCAACAGACCTT",1,22.38,9.43,-1.34,0.21,2.04,1.19,0.02,">1 nonsynonymous","L5V N92S",2
"lib1","SARS-CoV-2","AAGTTCAAGAAATACA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","F12G L38P K48* P96T W106S K114Q V181W",7
"lib1","SARS-CoV-2","AAGTTCAAGATGTCGG",6,124.35,10.69,-0.07,0.06,2.94,1.03,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","AAGTTCAAGGCACATT",2,23.35,10.65,-0.12,0.09,2.82,1.07,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","AAGTTCAATATAGCAT",2,4.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","AAGTTCAATGGTATCT",5,67.74,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I28A D59A T100K D112I A190L",5
"lib1","SARS-CoV-2","AAGTTCAGTAAGAAAC",4,155.44,9.18,-1.59,0.1,2.39,1.06,0,">1 nonsynonymous","V115I Q176R",2
"lib1","SARS-CoV-2","AAGTTCATGACAAACA",5,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A A14G A81D Y121R",4
"lib1","SARS-CoV-2","AAGTTCATGGCGCATA",4,29.74,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S69K D90S N120K T148K T170C",5
"lib1","SARS-CoV-2","AAGTTCCACAAAAGAG",2,37.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12R C61S P82T A89D R136C",5
"lib1","SARS-CoV-2","AAGTTCCCAATGTACG",2,14.2,9.91,-0.85,0.16,2.55,1,0.01,">1 nonsynonymous","K56E D112V N130S",3
"lib1","SARS-CoV-2","AAGTTCCGCCGACACA",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F156L S184T",2
"lib1","SARS-CoV-2","AAGTTCCGGTTTCTAA",1,21.07,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R16W S45H D90M G116N A145N",5
"lib1","SARS-CoV-2","AAGTTCGAGCTACGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D A33V V103Y F160A K199S",5
"lib1","SARS-CoV-2","AAGTTCGCGAATAAAA",12,194.09,10.77,0.01,0.07,2.89,1.05,0,"1 nonsynonymous","L111V",1
"lib1","SARS-CoV-2","AAGTTCGCGTATAATA",5,155.2,9.24,-1.52,0.06,2.84,1.09,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","AAGTTCGCTTAAGAGG",1,12.27,10.17,-0.59,0.18,2.72,1.02,0.01,"1 nonsynonymous","A81H",1
"lib1","SARS-CoV-2","AAGTTCGGTCTTGTTA",3,18.74,7.84,-2.92,0.26,1.5,1.15,0.02,">1 nonsynonymous","C102F G116F",2
"lib1","SARS-CoV-2","AAGTTCGTGGCGGTAA",5,20.44,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","T3K Y35D G51W F167T",4
"lib1","SARS-CoV-2","AAGTTCTAACACTAAT",1,14.99,10.19,-0.57,0.13,2.57,1.07,0.01,">1 nonsynonymous","K56Y N130C E141I",3
"lib1","SARS-CoV-2","AAGTTCTAAGTTACTG",3,57.05,8.98,-1.78,0.2,1.69,1.16,0.02,">1 nonsynonymous","A22V Y35I G83V",3
"lib1","SARS-CoV-2","AAGTTCTAGAACCTGA",11,2.52,NA,NA,NA,NA,NA,NA,"stop","C6Q F12* S36*",3
"lib1","SARS-CoV-2","AAGTTCTCAATCCAAA",5,44.17,10.68,-0.08,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTTCTCAGTACTTT",4,40.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16L N107I K128D R136V I142L P197A",6
"lib1","SARS-CoV-2","AAGTTCTCCCCAGTGA",3,494.78,8.27,-2.49,0.16,1.99,1.12,0.01,">1 nonsynonymous","V77L S113Q K132L",3
"lib1","SARS-CoV-2","AAGTTCTCGCAGACCA",6,99.65,8.73,-2.03,0.08,2.52,1.08,0,">1 nonsynonymous","A42P G117M F160L",3
"lib1","SARS-CoV-2","AAGTTCTGAGTATAAC",2,174.61,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K87V Y123T Y175D K198I",4
"lib1","SARS-CoV-2","AAGTTCTGGACTATTG",3,18.45,6,-4.76,1.84,1.5,1.23,0.05,">1 nonsynonymous","S45W L57R Y66C N92D H189L",5
"lib1","SARS-CoV-2","AAGTTCTTAATTCATG",1,9.1,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","A18I Y35M L60G Y143P A192E",5
"lib1","SARS-CoV-2","AAGTTCTTCACCTCAA",3,42.11,6,-4.76,1.94,1.5,1.09,0.01,">1 nonsynonymous","Y165G N171H Q176P",3
"lib1","SARS-CoV-2","AAGTTCTTCATAAATA",8,63.68,10.06,-0.71,0.06,2.93,1,0,">1 nonsynonymous","A33P F156K",2
"lib1","SARS-CoV-2","AAGTTCTTCATTACGC",6,181.16,10.66,-0.1,0.04,2.89,1.06,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AAGTTGAAAAGACTGC",1,11.2,9.71,-1.05,0.44,2.29,1.13,0.06,">1 nonsynonymous","N1W Y35A C49W T55I P82K R127H",6
"lib1","SARS-CoV-2","AAGTTGAACTCGGGCT",4,67.64,8.46,-2.3,0.21,1.83,1.21,0.01,">1 nonsynonymous","T3S G51Y Y119K",3
"lib1","SARS-CoV-2","AAGTTGAAGAGTGGAT",7,106.02,10.75,-0.01,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTTGAATATTTGCG",1,5.97,10.55,-0.22,0.17,2.98,1,0,"1 nonsynonymous","F47V",1
"lib1","SARS-CoV-2","AAGTTGACAATAAAAA",1,5.29,10.75,-0.01,0.13,3,1.01,0,">1 nonsynonymous","L122R T140L",2
"lib1","SARS-CoV-2","AAGTTGACCACTGCAT",5,0.98,NA,NA,NA,NA,NA,NA,"stop","P82V A89E P133R Q176*",4
"lib1","SARS-CoV-2","AAGTTGAGAAATAGTA",11,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F L95C G146S Q176L L183Q",5
"lib1","SARS-CoV-2","AAGTTGAGAGACCTCC",3,87.04,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11N I28Q E76A L122S T148V G155K T170S",7
"lib1","SARS-CoV-2","AAGTTGAGCTCAGTCT",1,36.36,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","D59Q A67N",2
"lib1","SARS-CoV-2","AAGTTGATACTAGAAT",3,90.91,10.18,-0.58,0.05,2.84,1,0,">1 nonsynonymous","D90W Y121F",2
"lib1","SARS-CoV-2","AAGTTGATCAACAATG",3,50.2,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","Y93N N120Y V180I",3
"lib1","SARS-CoV-2","AAGTTGATTCCTAACG",9,162.92,9.13,-1.63,0.09,1.9,1.15,0,">1 nonsynonymous","C31R V71T",2
"lib1","SARS-CoV-2","AAGTTGCACAAAAGCT",2,11.08,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","T15G G116P C150D L162F",4
"lib1","SARS-CoV-2","AAGTTGCCAGTTTAAG",1,16.98,10.49,-0.28,0.06,2.88,1.06,0,">1 nonsynonymous","G9S A89T K198P",3
"lib1","SARS-CoV-2","AAGTTGCCTCATAGGT",1,22.52,9.34,-1.42,0.2,1.83,1.18,0.02,">1 nonsynonymous","F12T Y123M",2
"lib1","SARS-CoV-2","AAGTTGCCTGTGATAA",2,17.73,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","C49T G146L",2
"lib1","SARS-CoV-2","AAGTTGCTCTTAAACT",1,39.23,10.8,0.03,0.07,2.93,1,0,">1 nonsynonymous","N4A L122W",2
"lib1","SARS-CoV-2","AAGTTGCTTGAGATAT",1,26.42,10.66,-0.11,0.06,2.95,1.02,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","AAGTTGGCGGATTACG",2,35.41,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L95G W106L E154W F167L",4
"lib1","SARS-CoV-2","AAGTTGGTAAACACTT",2,18.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88K G116Y N130G I142S G152P",5
"lib1","SARS-CoV-2","AAGTTGTCGTATAAGC",4,39.16,6,-4.76,1.88,1.5,1.14,0.01,">1 nonsynonymous","A14N C61I R124T Y165H",4
"lib1","SARS-CoV-2","AAGTTGTGCTTAAAAC",1,13.12,10.45,-0.31,0.14,2.66,1.25,0.01,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","AAGTTGTGGGAAGAAG",5,54.98,6.24,-4.53,0.77,1.5,1.23,0.03,">1 nonsynonymous","N4S E76I",2
"lib1","SARS-CoV-2","AAGTTTAAAGCTTCCG",4,102.95,10.23,-0.53,0.08,2.54,1,0,">1 nonsynonymous","T3Y V52P",2
"lib1","SARS-CoV-2","AAGTTTAAATATAATG",2,15.7,8.71,-2.06,0.33,1.5,1,0.05,">1 nonsynonymous","G83I F160A R179N",3
"lib1","SARS-CoV-2","AAGTTTAACATTCCCA",3,16.66,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F12Q Y35T S41P G146V C150H H189E",6
"lib1","SARS-CoV-2","AAGTTTAACGACGATC",5,0.75,NA,NA,NA,NA,NA,NA,"stop","R16* I88* D98S I138Q E154T F160D",6
"lib1","SARS-CoV-2","AAGTTTAAGGGAATAT",1,27.65,10.79,0.02,0.09,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AAGTTTAATACACATG",2,9.81,8.29,-2.47,0.28,2.79,1.25,0.02,">1 nonsynonymous","S36D K56Q N157L",3
"lib1","SARS-CoV-2","AAGTTTAATACTCAAA",4,28.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M G51Y I138F T170M",4
"lib1","SARS-CoV-2","AAGTTTAATTTTGAGA",7,79.53,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","S43Y I72H C158N",3
"lib1","SARS-CoV-2","AAGTTTACCGAAACCA",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128T T201L",2
"lib1","SARS-CoV-2","AAGTTTACGCCATAAA",9,39.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T3D Y50H N58P C158V",4
"lib1","SARS-CoV-2","AAGTTTACTAACTCGT",1,30.37,10.71,-0.06,0.05,2.88,1.05,0,">1 nonsynonymous","S41Y T55L G196Q",3
"lib1","SARS-CoV-2","AAGTTTAGACAAGCTA",5,105.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A33I G172E Y178F",3
"lib1","SARS-CoV-2","AAGTTTAGGGAGTAAA",1,5.2,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8M A22S G86T V103E",4
"lib1","SARS-CoV-2","AAGTTTAGTATTCAAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","N92*",1
"lib1","SARS-CoV-2","AAGTTTATAGGGAGTT",2,5.68,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77A T148P T201K",3
"lib1","SARS-CoV-2","AAGTTTATTTTCTGGA",2,5.7,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P7C F70A",2
"lib1","SARS-CoV-2","AAGTTTCCCAGACGGC",1,45.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15S N64C D97H F134K L162Q R179Y",6
"lib1","SARS-CoV-2","AAGTTTCGCGATACTA",9,106.6,9.47,-1.3,0.13,1.88,1.13,0.01,">1 nonsynonymous","K128S P133C E141F",3
"lib1","SARS-CoV-2","AAGTTTCTGCACGAAT",1,15.88,9.77,-0.99,0.18,2.27,1.05,0.02,"1 nonsynonymous","N24P",1
"lib1","SARS-CoV-2","AAGTTTGAACGCATAG",2,32.6,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6Y D90G P161C H189E",4
"lib1","SARS-CoV-2","AAGTTTGAGGTTAAGG",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M F44H N92I E141L S164N Y175F",6
"lib1","SARS-CoV-2","AAGTTTGCAACTAAAG",3,16.49,9.11,-1.65,0.2,1.78,1.19,0.01,">1 nonsynonymous","E10D D90I P149L F156V",4
"lib1","SARS-CoV-2","AAGTTTGCAATGTAAG",3,40.65,10.84,0.08,0.05,2.85,1.08,0,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","AAGTTTGCAGTGATAT",2,12.26,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","A22G S43T R124P",3
"lib1","SARS-CoV-2","AAGTTTTAATGTAAAG",1,31.68,8.71,-2.05,0.26,1.5,1.1,0.03,">1 nonsynonymous","N40T A89Q G196N",3
"lib1","SARS-CoV-2","AAGTTTTACAACAGAA",5,80.02,10.7,-0.07,0.04,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AAGTTTTCAATGATCC",1,21.76,10.49,-0.27,0.06,2.97,1,0,">1 nonsynonymous","I2H G9R T148N",3
"lib1","SARS-CoV-2","AAGTTTTCTACCTTAG",4,57.05,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P7N P177L",2
"lib1","SARS-CoV-2","AAGTTTTGCAGAGTTG",2,72.38,10.28,-0.48,0.06,2.72,1,0,">1 nonsynonymous","A33I N107C",2
"lib1","SARS-CoV-2","AAGTTTTGCGCGTTAA",2,34.88,9.56,-1.2,0.13,2.6,1.16,0.01,">1 nonsynonymous","S45Y T63Q G174L",3
"lib1","SARS-CoV-2","AAGTTTTGTACCTCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9D K26* Y35R A89S",4
"lib1","SARS-CoV-2","AAGTTTTGTTCTAAGG",14,72.7,6.36,-4.41,0.55,1.5,1.15,0.02,">1 nonsynonymous","Y121Q D137L",2
"lib1","SARS-CoV-2","AAGTTTTTAAACTTCG",1,25.45,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N92H D98T G117T",3
"lib1","SARS-CoV-2","AAGTTTTTGACTTAAA",7,39.32,6.21,-4.55,0.87,1.5,1.18,0.03,">1 nonsynonymous","V11K V65E E76I G86S",4
"lib1","SARS-CoV-2","AAGTTTTTTATTTACC",10,179.57,10.81,0.04,0.04,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAAAAAAAGTCAT",2,15.17,10.16,-0.6,0.11,2.68,1.06,0.01,">1 nonsynonymous","Y91M F160C",2
"lib1","SARS-CoV-2","AATAAAAAAGATATAG",1,5.87,10.81,0.04,0.2,2.65,1.04,0.01,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","AATAAAAAATACCAAA",6,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A14P D34F S43T N107A T201H",6
"lib1","SARS-CoV-2","AATAAAAACAGACTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L T63S",2
"lib1","SARS-CoV-2","AATAAAAACTCTCAGG",5,149.46,8.72,-2.04,0.09,2.37,1.13,0,">1 nonsynonymous","N118F F160P",2
"lib1","SARS-CoV-2","AATAAAAACTTAGACG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81I C150N",2
"lib1","SARS-CoV-2","AATAAAAAGAATCCAA",3,187.42,9.3,-1.47,0.07,2.9,1.09,0,">1 nonsynonymous","K87T N118S",2
"lib1","SARS-CoV-2","AATAAAAAGACAATAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","N4R K56* N64T G86R",4
"lib1","SARS-CoV-2","AATAAAAAGAGTCTAG",3,6.34,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","E141I S184P",2
"lib1","SARS-CoV-2","AATAAAAAGCTACACA",4,0.98,NA,NA,NA,NA,NA,NA,"stop","S45T N120*",2
"lib1","SARS-CoV-2","AATAAAAAGCTATATC",4,396.81,8.67,-2.09,0.12,1.8,1.15,0.01,">1 nonsynonymous","P7K S36K N107M",3
"lib1","SARS-CoV-2","AATAAAAAGCTCAAAA",5,47.11,10.79,0.02,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAAAAGGATAGAA",5,171.7,9.68,-1.09,0.12,1.76,1.09,0.01,">1 nonsynonymous","N30V E141F",2
"lib1","SARS-CoV-2","AATAAAAATAGAAGCC",3,8,6,-4.76,2,1.5,1.24,0.08,">1 nonsynonymous","C6I R25F D98L",3
"lib1","SARS-CoV-2","AATAAAAATAGACACA",4,98.76,10.74,-0.02,0.06,2.87,1.04,0,">1 nonsynonymous","Y39E P54N",2
"lib1","SARS-CoV-2","AATAAAAATTACTAAT",8,140.47,10.04,-0.72,0.06,2.67,1.03,0,">1 nonsynonymous","R16M N24Y K56Q V77L",4
"lib1","SARS-CoV-2","AATAAAACAAGTCCCC",10,158.88,10.63,-0.13,0.03,2.91,1.05,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","AATAAAACCACATTTT",1,8.25,10.84,0.07,0.14,2.67,1.09,0.01,">1 nonsynonymous","F44D E154S",2
"lib1","SARS-CoV-2","AATAAAACGGGCACCT",4,45.29,8.32,-2.44,0.22,1.5,1.11,0.02,">1 nonsynonymous","W23G K56R",2
"lib1","SARS-CoV-2","AATAAAACGTCAATAT",1,42.28,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","K87S C150R C158F",3
"lib1","SARS-CoV-2","AATAAAACTAAACACG",6,51.4,9.68,-1.08,0.12,1.79,1.1,0.01,">1 nonsynonymous","N4M P133F Q144N",3
"lib1","SARS-CoV-2","AATAAAACTGCTGTTG",1,30.24,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y143R N157Y",2
"lib1","SARS-CoV-2","AATAAAACTTACAAAA",2,36.17,10.57,-0.2,0.04,2.87,1.08,0,">1 nonsynonymous","T3L S36L T85R A190S",4
"lib1","SARS-CoV-2","AATAAAACTTTCAGCC",1,24.47,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S53H S113W L162F",3
"lib1","SARS-CoV-2","AATAAAAGAAAACGTC",4,32.26,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","T63M G117F F160L G174R K199S",5
"lib1","SARS-CoV-2","AATAAAAGATATTTGT",6,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K G83V N110Y",3
"lib1","SARS-CoV-2","AATAAAAGATCTTTCG",4,0.08,NA,NA,NA,NA,NA,NA,"stop","E76* F134V",2
"lib1","SARS-CoV-2","AATAAAAGCACTAAAT",26,534.82,8.22,-2.55,0.15,2.08,1.12,0.01,">1 nonsynonymous","G9I Q176E",2
"lib1","SARS-CoV-2","AATAAAAGCCCCAGTA",1,33.4,10.43,-0.33,0.05,2.93,1,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","AATAAAAGCTTCCTTG",6,182.42,6,-4.76,1.62,1.5,1.16,0,">1 nonsynonymous","N24Y T55I P149K S164M G174L P177A",6
"lib1","SARS-CoV-2","AATAAAAGGATTCCGA",3,54.45,7.64,-3.13,0.21,1.6,1.16,0.01,">1 nonsynonymous","N40R K94L L125H S147T T201M",5
"lib1","SARS-CoV-2","AATAAAAGGTTCACGA",6,30.89,8.73,-2.03,0.25,1.5,1.01,0.02,">1 nonsynonymous","L5K A14S S69L G83D P197Q T201M",6
"lib1","SARS-CoV-2","AATAAAAGTGAATTAT",4,39.68,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37L Y93F C158V",3
"lib1","SARS-CoV-2","AATAAAAGTGTGGCTG",12,0.31,NA,NA,NA,NA,NA,NA,"stop","L5* F62S V103I",3
"lib1","SARS-CoV-2","AATAAAATATTTGATT",1,6.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y W106R P191G G196R",4
"lib1","SARS-CoV-2","AATAAAATCATAACAA",7,125.72,8.74,-2.02,0.09,2.84,1.1,0,">1 nonsynonymous","L5N N157E",2
"lib1","SARS-CoV-2","AATAAAATCCAAAGCA",5,14.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D98A G172K",2
"lib1","SARS-CoV-2","AATAAAATCCCTCCAC",3,13.22,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","P7A A33P K94W A105P",4
"lib1","SARS-CoV-2","AATAAAATCTTTGTAT",15,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28A T100L",2
"lib1","SARS-CoV-2","AATAAAATGCGGCGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","S45I F99S G116D Y123*",4
"lib1","SARS-CoV-2","AATAAAATGTAACGTA",9,91.51,8.98,-1.78,0.17,1.5,1.09,0.02,">1 nonsynonymous","A105L Q163T",2
"lib1","SARS-CoV-2","AATAAAATGTCCAGAT",3,47.07,10.6,-0.17,0.06,2.86,1.02,0,">1 nonsynonymous","D97Y T140H",2
"lib1","SARS-CoV-2","AATAAAATTACCAATA",3,9.91,6,-4.76,0.69,3,1.09,0,">1 nonsynonymous","G9L Y93C G155H",3
"lib1","SARS-CoV-2","AATAAAATTAGAAATG",6,62.85,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","L5E D90Y C102S Y178G",4
"lib1","SARS-CoV-2","AATAAAATTGGTTAAA",7,95.13,10.71,-0.06,0.07,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AATAAAATTTTAAAGC",3,56.18,10.71,-0.06,0.09,2.93,1.05,0,"1 nonsynonymous","N58P",1
"lib1","SARS-CoV-2","AATAAACAAACGACGC",7,84.31,9.19,-1.57,0.1,2.49,1.12,0,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","AATAAACAAAGGACAA",1,9.89,6,-4.76,1.32,3,1.22,0.01,">1 nonsynonymous","W23T G86L",2
"lib1","SARS-CoV-2","AATAAACAAATTTAAA",3,34.75,9.14,-1.63,0.22,1.59,1.16,0.02,">1 nonsynonymous","L5V W106E",2
"lib1","SARS-CoV-2","AATAAACAAATTTATC",5,72.9,8.54,-2.22,0.24,1.5,1,0.02,">1 nonsynonymous","L5R V77L F99I G155A K199T",5
"lib1","SARS-CoV-2","AATAAACAAGAACCAA",1,0.9,NA,NA,NA,NA,NA,NA,"stop","A18* P96R Y119M",3
"lib1","SARS-CoV-2","AATAAACAATAAGCTA",2,60.38,6,-4.76,2,3,1.18,0,">1 nonsynonymous","R136P G174V T201M",3
"lib1","SARS-CoV-2","AATAAACACATATCAG",1,6.05,10.45,-0.32,0.13,2.92,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATAAACATACTGCGA",1,24.63,10.14,-0.62,0.15,2.52,1,0.01,">1 nonsynonymous","R27N V37Q I88L",3
"lib1","SARS-CoV-2","AATAAACCAAAAGTAC",4,30.61,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y39M P82T A105P F156T K199L",5
"lib1","SARS-CoV-2","AATAAACCAACAAAAA",1,21.85,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","K56L V103Y P133Y N151D G155R",5
"lib1","SARS-CoV-2","AATAAACCAACAATCA",2,27.63,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A105D I142D F160R",3
"lib1","SARS-CoV-2","AATAAACCAGACCAAA",2,12.2,10.9,0.14,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAACCCAGTTAAT",1,13.85,6,-4.76,2,1.5,1.12,0.07,">1 nonsynonymous","L5K Y50P A81T L95E N120D",5
"lib1","SARS-CoV-2","AATAAACCCTTGCCTT",4,32.04,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6I K48P A145V G152V G172L",5
"lib1","SARS-CoV-2","AATAAACGAGACAATA",3,34.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A18L F185S",2
"lib1","SARS-CoV-2","AATAAACGCATACAGC",2,44.51,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","S45Y V71A K94D E141G",4
"lib1","SARS-CoV-2","AATAAACGTAACAATA",3,53.49,10.37,-0.39,0.06,2.85,1.04,0,">1 nonsynonymous","A22T G83C",2
"lib1","SARS-CoV-2","AATAAACGTATTCCCC",1,8.14,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","F12R C61L C158F",3
"lib1","SARS-CoV-2","AATAAACTAAATAAAC",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATAAACTAAATTACG",2,6.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11S D68E Q84W F99S T140D",5
"lib1","SARS-CoV-2","AATAAACTAACATAGC",4,87.93,9.56,-1.21,0.05,2.16,1.06,0,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","AATAAACTAACTCCAT",11,130.28,10.63,-0.14,0.04,2.9,1,0,">1 nonsynonymous","Q84L S200L",2
"lib1","SARS-CoV-2","AATAAACTAGCTGACT",7,88.79,8.49,-2.28,0.21,1.78,1.11,0.02,">1 nonsynonymous","A14L G117V",2
"lib1","SARS-CoV-2","AATAAACTATTTGGTT",10,76.13,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T46S T55A Q84N P96L D112E",5
"lib1","SARS-CoV-2","AATAAACTCCGATTTT",5,1.83,NA,NA,NA,NA,NA,NA,"stop","A18W R127*",2
"lib1","SARS-CoV-2","AATAAACTGGAAACCC",2,26.48,9.75,-1.01,0.05,2.89,1.09,0,">1 nonsynonymous","L5F G9S F44N",3
"lib1","SARS-CoV-2","AATAAACTTCAGGATA",1,5.88,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","K48Y Y91A L125C",3
"lib1","SARS-CoV-2","AATAAAGAATAGAGAA",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S G117W F185P T201G",4
"lib1","SARS-CoV-2","AATAAAGACACTCTTC",3,2.04,NA,NA,NA,NA,NA,NA,"stop","R25L P54C I72*",3
"lib1","SARS-CoV-2","AATAAAGACCCTTACT",2,34.53,10.09,-0.67,0.09,2.61,1.08,0,">1 nonsynonymous","N13Q V37A A89P",3
"lib1","SARS-CoV-2","AATAAAGACTAAGGTG",9,149.54,10.26,-0.5,0.06,2.85,1,0,">1 nonsynonymous","Y35S T140M",2
"lib1","SARS-CoV-2","AATAAAGAGAGATAGC",2,54.9,10.79,0.03,0.08,2.94,1.03,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","AATAAAGAGTAAATCG",2,30.52,6.78,-3.98,0.31,1.5,1.04,0.03,">1 nonsynonymous","Y93C A192S K198S",3
"lib1","SARS-CoV-2","AATAAAGATCCCTGAT",4,0.36,NA,NA,NA,NA,NA,NA,"stop","K94L Y159*",2
"lib1","SARS-CoV-2","AATAAAGATGGATTTT",2,13.38,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I88Q V103H K114R Y178G",4
"lib1","SARS-CoV-2","AATAAAGCATAAAAGA",13,182.7,9.71,-1.05,0.1,1.8,1.12,0,">1 nonsynonymous","T3H Y35D K48I P149D",4
"lib1","SARS-CoV-2","AATAAAGCGGCGCAAA",1,12.53,9.37,-1.4,0.22,2.35,1.12,0.03,">1 nonsynonymous","Y123V G152C",2
"lib1","SARS-CoV-2","AATAAAGCTAAGGATA",7,47.53,8.19,-2.58,0.26,1.5,1.04,0.04,">1 nonsynonymous","T46P K56H T100N",3
"lib1","SARS-CoV-2","AATAAAGCTGGGCAAA",5,103.2,9.09,-1.68,0.07,2.6,1.15,0,">1 nonsynonymous","F12I G146Q",2
"lib1","SARS-CoV-2","AATAAAGGAAACCGAT",8,8.36,NA,NA,NA,NA,NA,NA,"stop","N30F Y50L A81G L131* L183V",5
"lib1","SARS-CoV-2","AATAAAGGATATAAAG",1,21,6.04,-4.72,1.16,1.5,1.15,0.03,">1 nonsynonymous","A14M N30Y P82L D98E C150D",5
"lib1","SARS-CoV-2","AATAAAGGCGATTAAA",4,52.1,10.44,-0.33,0.06,2.88,1.05,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","AATAAAGGGAGACAGA",6,126.01,10.29,-0.48,0.05,2.87,1.04,0,">1 nonsynonymous","A33R A42H K128S",3
"lib1","SARS-CoV-2","AATAAAGGGGTATGTG",2,19.88,10.8,0.03,0.07,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAAGGTCATACTA",6,59.79,10.63,-0.13,0.02,2.96,1,0,"1 nonsynonymous","K132Y",1
"lib1","SARS-CoV-2","AATAAAGTACGCAGAT",3,75.41,10.8,0.03,0.04,2.95,1.03,0,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","AATAAAGTATTGTCAA",2,8.39,10.58,-0.18,0.06,2.99,1.02,0,">1 nonsynonymous","V32A T100Y T140C P197V",4
"lib1","SARS-CoV-2","AATAAAGTCCATGATA",1,11.76,10.84,0.08,0.35,2.71,1,0.02,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","AATAAAGTTACCACAT",2,25.11,9.54,-1.22,0.12,1.94,1.08,0,">1 nonsynonymous","A81N L111R",2
"lib1","SARS-CoV-2","AATAAATAAATCGCGT",8,45.21,6.26,-4.5,0.55,1.5,1.16,0.02,"1 nonsynonymous","V103Y",1
"lib1","SARS-CoV-2","AATAAATAAATTCATC",3,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y V181T",2
"lib1","SARS-CoV-2","AATAAATAACTCAGGG",4,33.15,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14L K56R G117L D137K P169F",5
"lib1","SARS-CoV-2","AATAAATAATTCGAAT",3,41.52,10.64,-0.13,0.06,2.96,1,0,"1 nonsynonymous","K128G",1
"lib1","SARS-CoV-2","AATAAATACATTACGC",3,92.41,8.82,-1.94,0.05,2.81,1.12,0,">1 nonsynonymous","Y143C P197L",2
"lib1","SARS-CoV-2","AATAAATACGCTATAA",1,9.57,11.09,0.33,0.04,2.99,1.01,0,">1 nonsynonymous","L5K T148K E154Q",3
"lib1","SARS-CoV-2","AATAAATACTATCCTG",7,3.05,NA,NA,NA,NA,NA,NA,"stop","Y39* N64Y G155V K198P",4
"lib1","SARS-CoV-2","AATAAATAGAATACCT",4,15.92,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y50S L95M V103Y",3
"lib1","SARS-CoV-2","AATAAATAGACTAGAC",3,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F L95M A105G T148L G196W",5
"lib1","SARS-CoV-2","AATAAATAGATTAGAC",3,21.97,10.5,-0.27,0.11,2.75,1.05,0.01,">1 nonsynonymous","T63I D97L F160T",3
"lib1","SARS-CoV-2","AATAAATAGTTATTAT",3,86.33,10.31,-0.45,0.06,2.77,1.02,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","AATAAATATTCTAAGA",6,52.63,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N30S F99C",2
"lib1","SARS-CoV-2","AATAAATATTTTTAAG",13,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36F V77M N107G",3
"lib1","SARS-CoV-2","AATAAATCAGCCCATG",3,17.14,10.6,-0.17,0.13,2.68,1.3,0.01,">1 nonsynonymous","N40E T55M",2
"lib1","SARS-CoV-2","AATAAATCCAACGAAT",3,65.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A67G Y165Q",2
"lib1","SARS-CoV-2","AATAAATCCGGCAGGG",8,55.68,6.37,-4.39,0.74,1.5,1.29,0.03,">1 nonsynonymous","Y121E K128L S139R",3
"lib1","SARS-CoV-2","AATAAATCTTTACGGG",7,2.11,NA,NA,NA,NA,NA,NA,"stop","I2S A81K K94T N107T N120*",5
"lib1","SARS-CoV-2","AATAAATGAACAGAGG",5,10.38,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","C49W A105N G174R",3
"lib1","SARS-CoV-2","AATAAATGACCCATTA",6,90.06,7.89,-2.87,0.21,1.56,1.17,0.01,">1 nonsynonymous","L5I L38H G166H",3
"lib1","SARS-CoV-2","AATAAATGAGAATAAT",8,111.91,10.79,0.02,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAATGATCCGGAG",3,5.88,7.64,-3.13,0.29,1.5,1.07,0.02,">1 nonsynonymous","G9K D112V G152W Q168F",4
"lib1","SARS-CoV-2","AATAAATGTATTCAAA",1,36.8,10.35,-0.42,0.08,2.95,1,0,">1 nonsynonymous","T100R G116L",2
"lib1","SARS-CoV-2","AATAAATTAATTGGGC",6,99.21,8.69,-2.08,0.12,2.68,1.14,0.01,">1 nonsynonymous","Y66N S113V",2
"lib1","SARS-CoV-2","AATAAATTAGGCCTTA",2,23.27,10.26,-0.51,0.14,2.75,1.21,0.01,">1 nonsynonymous","N64Y S147L",2
"lib1","SARS-CoV-2","AATAAATTATGCATTG",4,98.03,10.76,0,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAATTCCGTGGAT",3,46.79,10.15,-0.62,0.06,2.42,1,0,">1 nonsynonymous","D97E V103I I138G",3
"lib1","SARS-CoV-2","AATAAATTCCTACAAT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","A22E L60*",2
"lib1","SARS-CoV-2","AATAAATTCTTTAACA",2,29.87,8.28,-2.48,0.2,1.86,1.14,0.02,">1 nonsynonymous","S19R V37K R73S S184V",4
"lib1","SARS-CoV-2","AATAAATTCTTTTTCG",8,2.64,NA,NA,NA,NA,NA,NA,"stop","S19T Q84*",2
"lib1","SARS-CoV-2","AATAAATTGGGGCCGA",2,53.12,10.79,0.03,0.05,2.89,1.09,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","AATAAATTGTAAAGCT",12,153.15,10.11,-0.65,0.06,2.68,1.01,0,">1 nonsynonymous","T100V Y123T S184Q",3
"lib1","SARS-CoV-2","AATAAATTGTCCGAAT",1,37.9,10.11,-0.65,0.12,2.55,1.03,0.01,">1 nonsynonymous","G9K V37S Q84K K128C",4
"lib1","SARS-CoV-2","AATAAATTGTTCCTGC",4,21.78,10.5,-0.27,0.07,2.93,1.05,0,">1 nonsynonymous","C61N T100F",2
"lib1","SARS-CoV-2","AATAAATTTCATAACA",4,67.87,8.61,-2.16,0.17,2.09,1.15,0.01,">1 nonsynonymous","N13G K48I G146N",3
"lib1","SARS-CoV-2","AATAACAAAAGGTATC",3,90.48,10.65,-0.11,0.05,2.93,1,0,">1 nonsynonymous","N30Y T55R T63D N171M",4
"lib1","SARS-CoV-2","AATAACAAACAAGGAT",4,111.79,10.76,0,0.05,2.89,1.06,0,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","AATAACAACACAATCA",7,32.97,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","S36M D90F C102I I104S",4
"lib1","SARS-CoV-2","AATAACAACGCCACAG",1,25.54,7.46,-3.3,0.32,1.5,1.02,0.03,">1 nonsynonymous","S53C N157Y N171Y V180S",4
"lib1","SARS-CoV-2","AATAACAACGCGAAAA",1,2.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","AATAACAAGAAAGATT",1,43.34,6.31,-4.46,0.59,1.5,1.17,0.02,">1 nonsynonymous","F99D K114N",2
"lib1","SARS-CoV-2","AATAACAAGAGAAAAC",3,21.04,6,-4.76,2,3,1.13,0.02,">1 nonsynonymous","N92V Y123A",2
"lib1","SARS-CoV-2","AATAACAAGTAGCAAA",2,200.89,10.59,-0.18,0.03,2.92,1.02,0,">1 nonsynonymous","K48L F160S",2
"lib1","SARS-CoV-2","AATAACACAGGACCCT",7,105.43,10.2,-0.57,0.06,2.47,1.02,0,">1 nonsynonymous","S29R V37Q D90G",3
"lib1","SARS-CoV-2","AATAACACAGTGAGCA",14,118.56,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2V D90L N107E N120T R127I I142Q",6
"lib1","SARS-CoV-2","AATAACACCCTGGTCA",13,138.3,9.96,-0.81,0.08,2.61,1.01,0,">1 nonsynonymous","G9I L162M",2
"lib1","SARS-CoV-2","AATAACACCTACTAAA",9,107.81,10.51,-0.25,0.04,2.91,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","AATAACACGATAATGT",4,94.86,10.13,-0.63,0.06,2.91,1.03,0,">1 nonsynonymous","N4S F156S",2
"lib1","SARS-CoV-2","AATAACACTAACACAC",5,81.3,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","AATAACAGAAACATTC",14,58.15,6,-4.76,0.93,1.5,1.1,0.01,">1 nonsynonymous","F62N D90Y F134L C150M F156L",5
"lib1","SARS-CoV-2","AATAACAGAACTAGTT",3,82.12,8.76,-2,0.13,1.61,1.12,0.01,"1 nonsynonymous","G86Q",1
"lib1","SARS-CoV-2","AATAACAGAAGACCAC",10,105.62,9.82,-0.95,0.13,1.81,1.12,0.01,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","AATAACAGATCATGAT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","V37* K94Y D137P",3
"lib1","SARS-CoV-2","AATAACAGGCCAGAAA",8,26.12,8.92,-1.84,0.41,1.5,1,0.06,">1 nonsynonymous","T15E N64L L125G V181E",4
"lib1","SARS-CoV-2","AATAACATAAACTTAT",2,17.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A105L T170R",3
"lib1","SARS-CoV-2","AATAACATAACAGTAA",2,2.14,NA,NA,NA,NA,NA,NA,"stop","A14T Y50L L60V T100*",4
"lib1","SARS-CoV-2","AATAACATAAGACGGT",5,21.3,NA,NA,NA,NA,NA,NA,"stop","A33* E76S N157K",3
"lib1","SARS-CoV-2","AATAACATAAGAGGTA",6,46.65,6.3,-4.46,0.64,1.5,1.16,0.03,">1 nonsynonymous","N4L G9C T85Y I88G Y119G G152K",6
"lib1","SARS-CoV-2","AATAACATACTTATTG",2,43.53,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A33K F47L Y119L G152I Y175I",5
"lib1","SARS-CoV-2","AATAACATAGTACGAT",6,16.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V103H N118L L162E",3
"lib1","SARS-CoV-2","AATAACATTATATTTA",6,67.57,10.66,-0.11,0.06,2.86,1.04,0,">1 nonsynonymous","T63D G83Y",2
"lib1","SARS-CoV-2","AATAACCAAAATCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I N24P Q84R N171Y",4
"lib1","SARS-CoV-2","AATAACCAAACAGATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I E154K",2
"lib1","SARS-CoV-2","AATAACCAAAGACAAT",1,38.47,10.73,-0.04,0.07,2.89,1.09,0,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","AATAACCAAAGCAGCG",5,27.24,6,-4.76,2,1.5,1.25,0.06,"1 nonsynonymous","C49D",1
"lib1","SARS-CoV-2","AATAACCAAATCGCAG",2,67.22,8.58,-2.18,0.13,1.62,1.13,0.01,">1 nonsynonymous","L131F A145E",2
"lib1","SARS-CoV-2","AATAACCAAGCAATTG",1,17.41,8.75,-2.01,0.21,1.77,1.08,0.04,">1 nonsynonymous","A14T I72L D90L K114I",4
"lib1","SARS-CoV-2","AATAACCAAGGGACGT",3,0.58,NA,NA,NA,NA,NA,NA,"stop","N130S P177*",2
"lib1","SARS-CoV-2","AATAACCAATACTTTA",6,41.99,7.46,-3.3,0.18,1.5,1.14,0.01,">1 nonsynonymous","S45C K94V",2
"lib1","SARS-CoV-2","AATAACCACGGACACT",11,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I R27E",2
"lib1","SARS-CoV-2","AATAACCACTCTGAAT",3,126.38,10.75,-0.02,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAACCAGTTAGGCG",1,6.7,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S45A G146K L162W S200I",4
"lib1","SARS-CoV-2","AATAACCATCTTCTTT",2,17.08,10.49,-0.28,0.09,2.7,1.25,0,">1 nonsynonymous","Q84R P197G",2
"lib1","SARS-CoV-2","AATAACCCCTCGGCCA",10,128.92,6.3,-4.47,0.47,1.5,1.17,0.01,">1 nonsynonymous","G9E R127H N157F",3
"lib1","SARS-CoV-2","AATAACCCTCATCCGG",4,54.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A81T P96K F99L W106K",4
"lib1","SARS-CoV-2","AATAACCGAATAAACG",9,42.65,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L60R D97C D112A",3
"lib1","SARS-CoV-2","AATAACCGACTACGGT",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17M S41H C102N",3
"lib1","SARS-CoV-2","AATAACCGGACTATCA",12,72.85,6,-4.76,1.7,1.5,1.2,0.01,">1 nonsynonymous","I88K G117Y",2
"lib1","SARS-CoV-2","AATAACCTAAACAAAG",1,22.7,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G117S R179L",2
"lib1","SARS-CoV-2","AATAACCTTGAGTAAA",5,131.57,10.75,-0.01,0.07,2.95,1.03,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","AATAACCTTTATAGGC",2,7.04,11.11,0.34,0.15,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAACGAAAATGTAC",10,67.55,10.67,-0.09,0.07,2.91,1.06,0,"1 nonsynonymous","V173Q",1
"lib1","SARS-CoV-2","AATAACGAAGAGTTTA",6,69.23,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T55V C61V G116V F134E F167L",5
"lib1","SARS-CoV-2","AATAACGAATTAAAAT",2,16.44,10.76,0,0.05,2.93,1.05,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","AATAACGACACTATGC",1,25.4,10.83,0.07,0.07,2.83,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAACGATTACCGTA",2,27.93,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N92L A145S N157R",3
"lib1","SARS-CoV-2","AATAACGCGATAGAAA",2,1.29,NA,NA,NA,NA,NA,NA,"stop","K128* E135R T170L",3
"lib1","SARS-CoV-2","AATAACGCGGTTACAA",1,12.93,8.36,-2.41,0.14,2.53,1.04,0.02,">1 nonsynonymous","I138S G146E",2
"lib1","SARS-CoV-2","AATAACGCTGGCAGAT",1,113.03,8.36,-2.4,0.26,1.5,1.14,0.03,">1 nonsynonymous","Y121L S129F G146F V173A",4
"lib1","SARS-CoV-2","AATAACGGCAAATATT",2,6.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V32L A89L T170I",3
"lib1","SARS-CoV-2","AATAACGGTTCGACAC",1,6.96,9.31,-1.45,0.33,1.68,1.31,0.03,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","AATAACGTGCTTATTG",4,37.95,10.81,0.05,0.1,2.9,1.02,0,"1 nonsynonymous","F62H",1
"lib1","SARS-CoV-2","AATAACGTTTAGTGAA",4,232.92,9.5,-1.26,0.06,2.86,1.06,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","AATAACGTTTGTCAGT",3,33.11,10.51,-0.26,0.07,2.9,1.04,0,">1 nonsynonymous","R27A A42V E141S",3
"lib1","SARS-CoV-2","AATAACTAAGAGAATA",5,140.3,10.39,-0.37,0.04,2.81,1.04,0,">1 nonsynonymous","N13G G116P",2
"lib1","SARS-CoV-2","AATAACTAATATTTGT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","L122S K128M F160I Y175*",4
"lib1","SARS-CoV-2","AATAACTACAAAATAT",7,55.99,6.17,-4.6,0.99,1.5,1.32,0.03,">1 nonsynonymous","W106V V181Y",2
"lib1","SARS-CoV-2","AATAACTACACGATTC",3,0.49,NA,NA,NA,NA,NA,NA,"stop","G116Y L162*",2
"lib1","SARS-CoV-2","AATAACTAGCGACACT",4,44.3,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4A E10D Y91V V103D Y123C",5
"lib1","SARS-CoV-2","AATAACTAGGTCATTG",1,0.71,NA,NA,NA,NA,NA,NA,"stop","D97* W106S S139R",3
"lib1","SARS-CoV-2","AATAACTCACAGTAAC",2,67.49,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N4S N107L G155V",3
"lib1","SARS-CoV-2","AATAACTCAGTCTATT",1,13.84,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","Y91G Y121L A145W P197T",4
"lib1","SARS-CoV-2","AATAACTCCGATGTGT",2,34.18,6,-4.76,1.49,1.5,1.16,0.03,">1 nonsynonymous","T3L R27M D97K G101C",4
"lib1","SARS-CoV-2","AATAACTCGAGTCATC",1,13.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17G S69R L125T",3
"lib1","SARS-CoV-2","AATAACTCGGTCCAAA",3,20.86,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","A14N V71W W106L Y121Q G146S",5
"lib1","SARS-CoV-2","AATAACTCGTAAATTC",5,50.88,6.67,-4.1,0.23,1.5,1.15,0.01,">1 nonsynonymous","S36G F44I R78S Q84I D97S N107T",6
"lib1","SARS-CoV-2","AATAACTCTAGAATTG",1,14.24,10.07,-0.7,0.22,2.13,1.05,0.03,">1 nonsynonymous","L5R N13R K56L D98T",4
"lib1","SARS-CoV-2","AATAACTCTTAAAACC",5,82.42,10.46,-0.31,0.07,2.8,1.07,0,">1 nonsynonymous","S41L P149T",2
"lib1","SARS-CoV-2","AATAACTGAGAGACAG",1,58.86,10.37,-0.39,0.18,2.32,1.23,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AATAACTGATAATCGA",2,41.32,10.1,-0.67,0.12,2.46,1.04,0.01,">1 nonsynonymous","T46S T85R S139F",3
"lib1","SARS-CoV-2","AATAACTGGTCTATTC",3,28.48,10.6,-0.16,0.09,2.75,1.03,0,">1 nonsynonymous","K48R S139Q",2
"lib1","SARS-CoV-2","AATAACTTATTCTGAA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","A105K V181*",2
"lib1","SARS-CoV-2","AATAACTTCGGGCAAT",1,10.31,8.65,-2.12,0.07,3,1.1,0,">1 nonsynonymous","R27I K87R G117F",3
"lib1","SARS-CoV-2","AATAACTTGTGTCAAG",2,18.22,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","R25M V71W G83D",3
"lib1","SARS-CoV-2","AATAACTTTATGTTCG",2,5.68,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F17V W23V G172W",3
"lib1","SARS-CoV-2","AATAACTTTCCTATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90E I138P C158*",3
"lib1","SARS-CoV-2","AATAAGAAAAAACGTG",2,24.56,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5R D68R K87E N130W T140R",5
"lib1","SARS-CoV-2","AATAAGAAACATGCAC",4,9.92,10.41,-0.35,0.13,2.1,1,0.01,">1 nonsynonymous","R27T F185T",2
"lib1","SARS-CoV-2","AATAAGAAAGATTATG",4,0.82,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib1","SARS-CoV-2","AATAAGAAATACGTTT",8,36.95,6.28,-4.49,0.78,1.5,1.18,0.04,">1 nonsynonymous","D68N D97Y L187G",3
"lib1","SARS-CoV-2","AATAAGAAATCTGCAG",1,20.99,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9R F47I N107D T170L",4
"lib1","SARS-CoV-2","AATAAGAACTTGGGAG",2,101,8.54,-2.22,0.11,2.2,1.06,0.01,">1 nonsynonymous","G51L N157G",2
"lib1","SARS-CoV-2","AATAAGAAGAAGGACA",4,4.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","AATAAGAAGCGAATGA",15,121.72,9.73,-1.04,0.1,1.87,1.09,0,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","AATAAGAATGGCAATT",4,24.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R25K F99T N151M",3
"lib1","SARS-CoV-2","AATAAGACAAAACCAG",10,0.7,NA,NA,NA,NA,NA,NA,"stop","N4Y N13F Y91* D97E V103M L122D S139L",7
"lib1","SARS-CoV-2","AATAAGACAAACCAAG",3,61.45,9.36,-1.41,0.07,2.86,1.09,0,">1 nonsynonymous","Y39S Y119T T148R",3
"lib1","SARS-CoV-2","AATAAGACAAAGCAAG",6,55.64,10.23,-0.54,0.09,2.72,1.05,0,">1 nonsynonymous","G9E S139I",2
"lib1","SARS-CoV-2","AATAAGACAACTCTTC",1,0.59,NA,NA,NA,NA,NA,NA,"stop","R27L C61S D90L W106T L131Y P149*",6
"lib1","SARS-CoV-2","AATAAGACCCTATAAC",2,100.92,9.79,-0.98,0.08,2.34,1.05,0,">1 nonsynonymous","N64L N107K",2
"lib1","SARS-CoV-2","AATAAGACGAAGGATG",1,10.59,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5T L95W",2
"lib1","SARS-CoV-2","AATAAGACTAGGCCCT",4,22.69,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S45Q G116R N118T K128F R136S P149R V182W",7
"lib1","SARS-CoV-2","AATAAGACTTAGATAT",3,2.25,NA,NA,NA,NA,NA,NA,"stop","T55* P96I Q176* T201K",4
"lib1","SARS-CoV-2","AATAAGAGCACAAACT",2,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K V37S Q84K K128C",4
"lib1","SARS-CoV-2","AATAAGAGCAGTATGT",13,9.21,NA,NA,NA,NA,NA,NA,"stop","L5M A18L S36I V52I G86* E186N",6
"lib1","SARS-CoV-2","AATAAGAGCCTAACAA",6,121.71,10,-0.76,0.07,2.58,1.04,0,">1 nonsynonymous","Y35R F44E",2
"lib1","SARS-CoV-2","AATAAGATAACAAAAG",1,8.85,10.56,-0.2,0.07,2.78,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAGATAATTGGTG",7,145.46,10.72,-0.05,0.05,2.96,1.01,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","AATAAGATATTTGACG",12,82.97,9.04,-1.72,0.19,1.5,1.15,0.02,">1 nonsynonymous","R25E N110R",2
"lib1","SARS-CoV-2","AATAAGATCAAAGCTA",4,24.33,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","W23P G86C D98Q P169G",4
"lib1","SARS-CoV-2","AATAAGATCAAGATAT",2,9.05,10.19,-0.57,0.08,2.86,1,0,">1 nonsynonymous","K26L F134S",2
"lib1","SARS-CoV-2","AATAAGATTCCCACAA",9,98.44,9.27,-1.49,0.09,2.2,1.1,0,">1 nonsynonymous","I2T R16T P54R R78G D98C N107K",6
"lib1","SARS-CoV-2","AATAAGATTGCACAAG",6,100.54,10.32,-0.45,0.04,2.92,1,0,"1 nonsynonymous","Y178L",1
"lib1","SARS-CoV-2","AATAAGCACAATAGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","V52I Y91I K114N V153* S164R L187K",6
"lib1","SARS-CoV-2","AATAAGCACGACCAAT",3,108.08,10.74,-0.02,0.06,2.92,1.05,0,">1 nonsynonymous","S43T T201K",2
"lib1","SARS-CoV-2","AATAAGCAGGTACTTA",2,42.29,10.86,0.1,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAGCATACGACAG",1,26.21,8.49,-2.28,0.34,1.65,1.15,0.05,">1 nonsynonymous","V32G I104L L111I S139A E154A Q168L",6
"lib1","SARS-CoV-2","AATAAGCATGTTGTAT",1,99.36,10.04,-0.73,0.1,2.28,1,0,">1 nonsynonymous","Q84W L188R",2
"lib1","SARS-CoV-2","AATAAGCATTTCTAAC",6,53.19,10.68,-0.09,0.04,2.87,1.07,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","AATAAGCCTGATCACA",7,62.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D112V Y121V",2
"lib1","SARS-CoV-2","AATAAGCGATTACTAA",1,47.31,10.77,0.01,0.06,2.9,1.03,0,"1 nonsynonymous","S147I",1
"lib1","SARS-CoV-2","AATAAGCGCAGCAAGA",3,59.77,6,-4.76,1.64,1.5,1.16,0.01,">1 nonsynonymous","C6S T100L Q176R",3
"lib1","SARS-CoV-2","AATAAGCGCATATAGA",1,10.63,7.75,-3.01,0.49,1.5,1.2,0.07,">1 nonsynonymous","S45G N107R E135S",3
"lib1","SARS-CoV-2","AATAAGCGGTCAAAAT",1,29.81,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T46S D68Q G83S K94A",4
"lib1","SARS-CoV-2","AATAAGCGTTTGGAAC",1,38.96,10.26,-0.5,0.14,2.06,1.09,0.01,">1 nonsynonymous","Q84L W106F P197Q",3
"lib1","SARS-CoV-2","AATAAGCTAATCTCGC",1,34.04,10.85,0.09,0.09,2.87,1.07,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","AATAAGCTAATCTGTT",4,130.63,10.6,-0.16,0.06,2.88,1.04,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","AATAAGCTCTAAACAA",2,22.04,10.25,-0.51,0.08,2.9,1.04,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","AATAAGGAAAAATGCA",3,15.93,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R124K Y159C",2
"lib1","SARS-CoV-2","AATAAGGAAAATATAA",4,103.63,10.77,0,0.08,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AATAAGGATATAACTA",4,46.84,10.73,-0.03,0.04,2.95,1,0,"1 nonsynonymous","T63H",1
"lib1","SARS-CoV-2","AATAAGGCAACCCTTA",1,8.89,7.47,-3.3,0.37,2.31,1.12,0.02,">1 nonsynonymous","G86N T148G T201D",3
"lib1","SARS-CoV-2","AATAAGGCGAGAGAGA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","S19W Y50H A105L I142H K199*",5
"lib1","SARS-CoV-2","AATAAGGGAATTTGAG",6,89.9,10.78,0.01,0.06,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAGGGCCCATCAA",3,6.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N D97S L131N V173K",4
"lib1","SARS-CoV-2","AATAAGGGGCAAACAC",2,5.28,8.6,-2.16,0.29,1.87,1.15,0.03,">1 nonsynonymous","G51V V71I K87V V173F G196C",5
"lib1","SARS-CoV-2","AATAAGGGGCCGGAAA",4,35.65,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","G9E Y35G L95F P133M C158N",5
"lib1","SARS-CoV-2","AATAAGGTAAATTATG",4,78.95,10.77,0.01,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAAGGTGCAATATA",6,0.34,NA,NA,NA,NA,NA,NA,"stop","T3I E10K T100* S113V",4
"lib1","SARS-CoV-2","AATAAGGTGTACTGGC",7,80.23,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P7I L57W A67D V173Y",4
"lib1","SARS-CoV-2","AATAAGGTTACGCTAA",1,3.81,NA,NA,NA,NA,NA,NA,"stop","G9* R27L T63L E141R",4
"lib1","SARS-CoV-2","AATAAGTAAGACAGTT",2,12.14,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","F8P E76T P197D",3
"lib1","SARS-CoV-2","AATAAGTATATACAAC",1,20.3,10.46,-0.31,0.11,2.32,1,0.01,">1 nonsynonymous","S41P K56R A81R",3
"lib1","SARS-CoV-2","AATAAGTATGAACGAG",1,67.28,10.82,0.05,0.1,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AATAAGTATGGCACTA",4,21.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E D98M S108F S184N",4
"lib1","SARS-CoV-2","AATAAGTATGTGTAAA",3,13.54,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C6F C49V G86S P96F",4
"lib1","SARS-CoV-2","AATAAGTCATAGTGGT",2,80.67,10.55,-0.22,0.06,2.84,1,0,">1 nonsynonymous","I142Y L187E",2
"lib1","SARS-CoV-2","AATAAGTGATGCTTAG",8,31.81,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F17E C49D R73M G174W",4
"lib1","SARS-CoV-2","AATAAGTGCAGAACAC",3,68.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D68L C150V Q176V",3
"lib1","SARS-CoV-2","AATAAGTGCAGCTAAG",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Q R27I D112G",3
"lib1","SARS-CoV-2","AATAAGTGTGAGTTAA",1,9.57,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","V65L A81P N109P",3
"lib1","SARS-CoV-2","AATAAGTTAAATAAAT",1,6.7,6,-4.76,2,3,1.11,0.02,">1 nonsynonymous","F47L Y93T Y121L C158G",4
"lib1","SARS-CoV-2","AATAAGTTAATGAAAC",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99D K132V Y143M",3
"lib1","SARS-CoV-2","AATAAGTTATTATCAA",18,16.36,6.27,-4.49,0.67,1.5,1.19,0.03,">1 nonsynonymous","N4I D34F V103T G116S V153G",5
"lib1","SARS-CoV-2","AATAAGTTGAAACTTT",3,60.61,10.76,-0.01,0.06,2.9,1.01,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","AATAAGTTGATACATT",1,0.54,NA,NA,NA,NA,NA,NA,"stop","A89V Y121*",2
"lib1","SARS-CoV-2","AATAAGTTTACGAACA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","L38I G86K Y91*",3
"lib1","SARS-CoV-2","AATAATAAAAATTACT",2,27.76,6,-4.76,1.42,1.5,1.08,0.01,">1 nonsynonymous","Y35A K87E L122N K128V P149T",5
"lib1","SARS-CoV-2","AATAATAAAGAACTTG",8,50.75,9.89,-0.87,0.16,1.78,1.13,0.01,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","AATAATAAATGTATGT",2,0.93,NA,NA,NA,NA,NA,NA,"stop","G51Y C61M G86* E154D Y178T",5
"lib1","SARS-CoV-2","AATAATAACAAGTGAT",9,27.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42F K56P Y93V",3
"lib1","SARS-CoV-2","AATAATAACAGGCGCG",2,51.87,6,-4.76,1.22,1.87,1.08,0,">1 nonsynonymous","D112T F156C",2
"lib1","SARS-CoV-2","AATAATAACCCTCATG",2,42.53,8.15,-2.62,0.17,2.29,1.07,0.01,"1 nonsynonymous","N157V",1
"lib1","SARS-CoV-2","AATAATAACCTTTTGT",4,42.35,9.82,-0.95,0.14,2.15,1.05,0.01,">1 nonsynonymous","I2Y N40Q A67Y",3
"lib1","SARS-CoV-2","AATAATAACGATATGC",9,8.55,NA,NA,NA,NA,NA,NA,"stop","S19T G155T V173A V182*",4
"lib1","SARS-CoV-2","AATAATAAGAAAAATT",1,37.71,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36Q P54I L125P P161L",4
"lib1","SARS-CoV-2","AATAATAAGTTACCCT",8,63.44,10.12,-0.65,0.07,2.76,1.04,0,">1 nonsynonymous","V37I N64L V77M F160N",4
"lib1","SARS-CoV-2","AATAATAAGTTTTACA",2,47.57,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14S V77K G155N Q176L",4
"lib1","SARS-CoV-2","AATAATACAAATGCCA",9,78.83,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N107L D137S S147A F167C",4
"lib1","SARS-CoV-2","AATAATACAGCGGTAT",6,113.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19R L57S K132T Y165S Y175T",5
"lib1","SARS-CoV-2","AATAATACGCGTCCAA",4,108,10.67,-0.1,0.04,2.92,1.05,0,">1 nonsynonymous","G83R P191T",2
"lib1","SARS-CoV-2","AATAATACGTTATAGC",3,5.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51K V71K D98R T201I",4
"lib1","SARS-CoV-2","AATAATACTAACGAAC",1,1.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48D",1
"lib1","SARS-CoV-2","AATAATAGATAATGTT",3,28,10.53,-0.24,0.05,2.87,1.07,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","AATAATAGCGAAAACA",9,104.67,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","A14I Y39V K94I P133T C158D",5
"lib1","SARS-CoV-2","AATAATAGCGATTGCG",1,20.71,10.95,0.19,0.1,2.93,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AATAATAGTAGTCATC",13,3.54,NA,NA,NA,NA,NA,NA,"stop","N64T K87* F99Y",3
"lib1","SARS-CoV-2","AATAATATAGATACTG",3,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W Y35K K56A V77L W106S R127S G146L N157R V180T",9
"lib1","SARS-CoV-2","AATAATATCAAAAAAT",4,32.81,10.63,-0.14,0.08,2.74,1.19,0,">1 nonsynonymous","G9H V65G N130V",3
"lib1","SARS-CoV-2","AATAATATTAATCAAA",3,24.77,9.56,-1.21,0.24,1.5,1.2,0.03,"1 nonsynonymous","V77S",1
"lib1","SARS-CoV-2","AATAATATTACCTCGC",4,77.05,9.95,-0.82,0.12,1.9,1.07,0.01,">1 nonsynonymous","V52L W106L",2
"lib1","SARS-CoV-2","AATAATATTCATAACG",4,60.26,8.02,-2.74,0.39,1.5,1,0.05,">1 nonsynonymous","P82Y R136T",2
"lib1","SARS-CoV-2","AATAATATTTAACTAC",2,60.49,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39S F167I Y175M",3
"lib1","SARS-CoV-2","AATAATATTTAGTGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1G Y39V D59T T85W K199*",5
"lib1","SARS-CoV-2","AATAATATTTGGTATG",7,87.44,10.71,-0.06,0.04,2.95,1.03,0,"1 nonsynonymous","T148G",1
"lib1","SARS-CoV-2","AATAATCAAAATCCCA",6,93.36,10.8,0.04,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAATCAAAATTCTC",2,60.79,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I72V P82T N107L N130L C195L",5
"lib1","SARS-CoV-2","AATAATCAAACTCTCG",7,3.25,NA,NA,NA,NA,NA,NA,"stop","F62Y W106* P191D",3
"lib1","SARS-CoV-2","AATAATCAAAGAAATG",7,78.18,9.65,-1.12,0.13,1.97,1.12,0.01,">1 nonsynonymous","K94S T148C",2
"lib1","SARS-CoV-2","AATAATCAAATAGGAA",8,94.84,10.81,0.05,0.08,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAATCAAATTCGCA",1,14.91,6.37,-4.39,0.63,1.5,1.11,0.03,">1 nonsynonymous","A14C V52T Y119H G146W",4
"lib1","SARS-CoV-2","AATAATCAAGTCTGAA",2,47.21,6.58,-4.19,0.43,1.5,1.16,0.02,">1 nonsynonymous","R25A G86S D98H L125F S139W Y175S",6
"lib1","SARS-CoV-2","AATAATCAATATTGTT",5,0.4,NA,NA,NA,NA,NA,NA,"stop","F44A Q84* W106R D137L",4
"lib1","SARS-CoV-2","AATAATCACAGCCTCA",3,50.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K48R L95P F126V",3
"lib1","SARS-CoV-2","AATAATCACTTGCCAC",2,33.22,9.06,-1.7,0.2,1.6,1.12,0.03,">1 nonsynonymous","Y50N T55D I104Y",3
"lib1","SARS-CoV-2","AATAATCAGACGAAAG",1,30.76,8.89,-1.88,0.45,1.5,1,0.07,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","AATAATCAGCCCGATA",4,76.01,10.69,-0.08,0.06,2.91,1.02,0,">1 nonsynonymous","Q84C P197R",2
"lib1","SARS-CoV-2","AATAATCAGGAATTAG",7,95.06,7.4,-3.37,0.34,1.5,1.13,0.03,">1 nonsynonymous","K56C G86N N110R S129T",4
"lib1","SARS-CoV-2","AATAATCATACTAAAT",2,53.96,10.69,-0.07,0.09,2.92,1.02,0,"1 nonsynonymous","F134Y",1
"lib1","SARS-CoV-2","AATAATCATATGCATT",6,74.08,10.52,-0.25,0.05,2.93,1.02,0,">1 nonsynonymous","N120H E141L",2
"lib1","SARS-CoV-2","AATAATCATGTCTAGT",9,94.01,10.86,0.1,0.09,2.91,1.05,0,">1 nonsynonymous","V37A K56T T201Q",3
"lib1","SARS-CoV-2","AATAATCCAACAACTA",5,69.6,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N40T G51N Y91V P96F V115Y",5
"lib1","SARS-CoV-2","AATAATCCACAGCCCT",12,141.01,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L5S V37C K94L L131S T201R",5
"lib1","SARS-CoV-2","AATAATCCCCGAGGCA",3,23.71,6.27,-4.49,0.59,1.5,1.14,0.02,">1 nonsynonymous","T100N R127T",2
"lib1","SARS-CoV-2","AATAATCCCCTCTATC",4,78.27,10.76,-0.01,0.09,2.83,1.11,0,"1 nonsynonymous","A192L",1
"lib1","SARS-CoV-2","AATAATCCCGAGCATA",4,30.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8S T46S V65G F167T",4
"lib1","SARS-CoV-2","AATAATCCCGATAATT",8,216.2,8.47,-2.3,0.16,2.25,1.09,0.01,">1 nonsynonymous","N4G N107C Y119V",3
"lib1","SARS-CoV-2","AATAATCCGGGTCCAT",4,0.89,NA,NA,NA,NA,NA,NA,"stop","T15K V37* G74S D97E",4
"lib1","SARS-CoV-2","AATAATCCTATCTATC",3,15.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V37H C49S",2
"lib1","SARS-CoV-2","AATAATCGACAACGCT",1,2.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N30G",1
"lib1","SARS-CoV-2","AATAATCGACGCCTCT",2,24.27,10.58,-0.18,0.07,2.81,1.05,0,"1 nonsynonymous","V32G",1
"lib1","SARS-CoV-2","AATAATCGAGTACAAA",7,133.37,10.71,-0.06,0.05,2.92,1.06,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","AATAATCGGCCTTCCT",4,43.86,6.37,-4.39,0.69,1.5,1.22,0.04,">1 nonsynonymous","L60A A89Y E141G P169L",4
"lib1","SARS-CoV-2","AATAATCGGTATTAAC",6,11.18,NA,NA,NA,NA,NA,NA,"stop","T15* V65Q R78F Y91L S129T",5
"lib1","SARS-CoV-2","AATAATCGTAACGGAT",6,165.58,10.07,-0.69,0.04,2.91,1,0,">1 nonsynonymous","K128P A145K",2
"lib1","SARS-CoV-2","AATAATCGTTAACCAA",8,9.62,NA,NA,NA,NA,NA,NA,"stop","N4V K94*",2
"lib1","SARS-CoV-2","AATAATCTATTACTCA",2,9.33,9.98,-0.79,0.42,1.86,1,0.06,">1 nonsynonymous","F17Y K48F K56L L122R",4
"lib1","SARS-CoV-2","AATAATCTTATACGGG",1,33.18,8.35,-2.41,0.18,2.54,1.01,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","AATAATCTTTAAATAA",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63F D68P D90K A105S Y121V",5
"lib1","SARS-CoV-2","AATAATGAAAAGCCTA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","I28N Q84*",2
"lib1","SARS-CoV-2","AATAATGAATGTAACA",10,2.46,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib1","SARS-CoV-2","AATAATGATCCAGGTG",8,87.98,7.23,-3.54,0.2,1.71,1.14,0.01,">1 nonsynonymous","G146L G152Q",2
"lib1","SARS-CoV-2","AATAATGATGTATCAA",9,0.49,NA,NA,NA,NA,NA,NA,"stop","R27M V37W A42R T85K G116W L162* F167T",7
"lib1","SARS-CoV-2","AATAATGTAAAACCGC",4,123.86,10.67,-0.09,0.05,2.92,1.04,0,">1 nonsynonymous","N151T T201L",2
"lib1","SARS-CoV-2","AATAATGTACCGTCAT",5,157.92,10.81,0.05,0.08,2.83,1.09,0,">1 nonsynonymous","T3Q V153K",2
"lib1","SARS-CoV-2","AATAATGTATTGTTCC",17,161.63,9.23,-1.54,0.11,1.92,1.16,0.01,">1 nonsynonymous","C6I S36V E141S T148D",4
"lib1","SARS-CoV-2","AATAATGTCCCTGAAG",10,38.21,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","C49S G174T",2
"lib1","SARS-CoV-2","AATAATGTGTAACCCG",7,59.48,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T55Y P82K T140R Q176W",4
"lib1","SARS-CoV-2","AATAATGTTAAATACT",8,69.97,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V52R D68Y V77R T100C Q144L",5
"lib1","SARS-CoV-2","AATAATTAAAAACTTT",5,71.87,10.82,0.05,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAATTAAAAGGAGT",3,60.4,10.79,0.03,0.06,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AATAATTAACAATGGA",2,27.07,10.01,-0.75,0.11,2.24,1,0.01,">1 nonsynonymous","K48I Y66R",2
"lib1","SARS-CoV-2","AATAATTAAGATACAA",7,28.67,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P82D P96K S184P",3
"lib1","SARS-CoV-2","AATAATTAATACAGCA",3,32.45,6.95,-3.81,0.42,1.5,1.18,0.05,">1 nonsynonymous","Y35C F126S F160Q E186S",4
"lib1","SARS-CoV-2","AATAATTACGACAAAA",4,19.56,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N40H I104N",2
"lib1","SARS-CoV-2","AATAATTAGATTTAAA",7,59.79,6,-4.76,0.72,2.04,1.15,0.01,">1 nonsynonymous","F17K P82A R136M",3
"lib1","SARS-CoV-2","AATAATTAGTACGGGC",4,27.63,10.06,-0.71,0.09,2.75,1.04,0,">1 nonsynonymous","L5W K94Q",2
"lib1","SARS-CoV-2","AATAATTATCCACTCG",3,27.45,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6R G86C Y119T",3
"lib1","SARS-CoV-2","AATAATTATGGTAGAT",1,22.69,9.93,-0.83,0.09,2.46,1.09,0.01,">1 nonsynonymous","D98F A105T Y143F",3
"lib1","SARS-CoV-2","AATAATTATGGTTTTT",4,30.42,8.92,-1.85,0.12,1.7,1.15,0.01,">1 nonsynonymous","A14L S53G D59A L111E",4
"lib1","SARS-CoV-2","AATAATTCAAAGAATC",5,77.44,7.47,-3.29,0.35,1.5,1.09,0.04,">1 nonsynonymous","P7L V65I A105I K128L",4
"lib1","SARS-CoV-2","AATAATTCAGAATCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R D98E F134L",3
"lib1","SARS-CoV-2","AATAATTCCAATAATA",1,1.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135C",1
"lib1","SARS-CoV-2","AATAATTCGTTACACG",3,30.04,8.53,-2.24,0.13,2.58,1.09,0.01,">1 nonsynonymous","I28W A33S S53I N157A",4
"lib1","SARS-CoV-2","AATAATTGAACTAGCA",13,91.25,8.82,-1.95,0.18,1.57,1.16,0.01,">1 nonsynonymous","Y35S S45V G83H S113A",4
"lib1","SARS-CoV-2","AATAATTGACGCCTCG",2,5.53,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","L60P P177T",2
"lib1","SARS-CoV-2","AATAATTGCGCAATTA",2,14.08,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V20R",1
"lib1","SARS-CoV-2","AATAATTGGCTACCGT",4,34.33,10.47,-0.3,0.08,2.82,1.07,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","AATAATTGTTATAGCT",1,18.61,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D68L F167S",2
"lib1","SARS-CoV-2","AATAATTTAATGATAG",2,7.4,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N13V A89V L95V",3
"lib1","SARS-CoV-2","AATAATTTCTTTAATG",1,11.67,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N1V L95P E154T",3
"lib1","SARS-CoV-2","AATAATTTGGACGTAA",2,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V K114R K128N",3
"lib1","SARS-CoV-2","AATACAAAAACGTAAC",1,17.09,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","C61L R73L N107S R124V F167L",5
"lib1","SARS-CoV-2","AATACAAACCCCCCTA",5,55.37,6.4,-4.37,0.68,1.5,1.19,0.03,">1 nonsynonymous","P82G Y119D",2
"lib1","SARS-CoV-2","AATACAAAGAAGCGAT",5,99.43,10.75,-0.02,0.06,2.89,1.06,0,">1 nonsynonymous","L5F S200F",2
"lib1","SARS-CoV-2","AATACAAAGGTATATT",9,2.22,NA,NA,NA,NA,NA,NA,"stop","A67T Y93W V153*",3
"lib1","SARS-CoV-2","AATACAAAGTTATCTA",6,61.34,10.76,-0.01,0.05,2.92,1.03,0,"1 nonsynonymous","V37C",1
"lib1","SARS-CoV-2","AATACAACACGTAAAT",6,12.19,6,-4.76,2,1.5,1.15,0.06,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","AATACAACCTATCGCA",13,146.9,10.13,-0.63,0.06,2.76,1,0,">1 nonsynonymous","C61W G83E",2
"lib1","SARS-CoV-2","AATACAACTGTAACAG",7,32.19,8.94,-1.82,0.25,1.5,1.09,0.03,">1 nonsynonymous","R25T D90F",2
"lib1","SARS-CoV-2","AATACAACTGTAAGCT",5,107.43,9.68,-1.09,0.07,1.97,1.07,0,">1 nonsynonymous","F8S A14E",2
"lib1","SARS-CoV-2","AATACAACTTGAAATC",2,30.03,10.12,-0.65,0.09,2.02,1.07,0,">1 nonsynonymous","N24F Y66N T140Q",3
"lib1","SARS-CoV-2","AATACAAGAAATTAAT",1,19.84,10.55,-0.22,0.07,2.94,1.01,0,">1 nonsynonymous","N4K K48E D90A",3
"lib1","SARS-CoV-2","AATACAAGAAGTATCC",5,0.27,NA,NA,NA,NA,NA,NA,"stop","K87* P149F",2
"lib1","SARS-CoV-2","AATACAAGACACGAAG",13,36.33,7.64,-3.13,0.34,1.5,1.03,0.04,">1 nonsynonymous","D97G W106L S139R",3
"lib1","SARS-CoV-2","AATACAAGCTTCTACA",2,62.04,7.75,-3.02,0.17,1.61,1.13,0.01,">1 nonsynonymous","A14H Y175M",2
"lib1","SARS-CoV-2","AATACAAGGGCAGAAA",2,32.78,10.78,0.02,0.13,2.88,1.02,0.01,">1 nonsynonymous","C61N D98C",2
"lib1","SARS-CoV-2","AATACAAGTCACCCAA",1,13.66,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S45M F99V P149V",3
"lib1","SARS-CoV-2","AATACAAGTTGGCACG",1,26.24,9.62,-1.14,0.08,2.83,1.08,0,">1 nonsynonymous","T85R P169V G174L",3
"lib1","SARS-CoV-2","AATACAATAATAACGT",6,49.95,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N13D G101M I138G",3
"lib1","SARS-CoV-2","AATACAATAATTGCAT",5,103.74,9.23,-1.53,0.13,1.72,1.12,0.01,">1 nonsynonymous","F17I Y35L P133D",3
"lib1","SARS-CoV-2","AATACAATACAACCAC",5,76.9,10.76,0,0.06,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AATACAATAGGTTGTC",4,38.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14F K94T",2
"lib1","SARS-CoV-2","AATACAATATTGCACA",7,85.41,9.95,-0.81,0.11,1.99,1.01,0,">1 nonsynonymous","N58M Y66K D97S S129R",4
"lib1","SARS-CoV-2","AATACAATCACAGTGG",7,1.5,NA,NA,NA,NA,NA,NA,"stop","C6S N13T V115*",3
"lib1","SARS-CoV-2","AATACAATCACTCACG",3,10.32,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N1G V103Y N171Q",3
"lib1","SARS-CoV-2","AATACAATCCCCACCT",1,6.37,10.68,-0.08,0.11,3,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACAATCTTTACTT",3,13.58,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","R124K Y159C",2
"lib1","SARS-CoV-2","AATACAATGCAATAGG",4,27.27,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G51K D59R D68K G83M Y93N",5
"lib1","SARS-CoV-2","AATACACAAAATCCAT",4,58.58,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D98S D112S L122I",3
"lib1","SARS-CoV-2","AATACACAACTCCGAG",2,1.67,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","AATACACAATAAAACG",8,23.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12N S45Y C61T D90W F156W",5
"lib1","SARS-CoV-2","AATACACAGAGGACAA",7,4.85,NA,NA,NA,NA,NA,NA,"stop","G83* L125R T140M",3
"lib1","SARS-CoV-2","AATACACATATATAGT",9,1.38,NA,NA,NA,NA,NA,NA,"stop","C49* T100N F167C N171D",4
"lib1","SARS-CoV-2","AATACACATCAACTTC",2,41.31,7.84,-2.92,0.1,1.5,1.11,0,">1 nonsynonymous","R73N G83I",2
"lib1","SARS-CoV-2","AATACACATCTGTCAG",6,77.77,10.37,-0.4,0.04,2.92,1.04,0,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","AATACACATGGATAAA",4,45.13,7.43,-3.33,0.25,1.5,1.11,0.02,">1 nonsynonymous","I28T E141F G166V",3
"lib1","SARS-CoV-2","AATACACGGGCATAAC",7,59.98,9.97,-0.79,0.11,1.96,1.09,0,">1 nonsynonymous","D90G E141P",2
"lib1","SARS-CoV-2","AATACACGTGTATCAA",13,170.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A22G G83H Y119W Y143C V173L",5
"lib1","SARS-CoV-2","AATACACTCCAGAGAA",1,50.75,9.59,-1.17,0.18,1.61,1.09,0.01,">1 nonsynonymous","L38T K128L",2
"lib1","SARS-CoV-2","AATACACTCCATATTG",13,214.38,8.23,-2.53,0.11,2.6,1.1,0,">1 nonsynonymous","G9N Q144T C150R Q168F",4
"lib1","SARS-CoV-2","AATACACTCCTCGCAA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","R25Y V37A K128* V153H K199R",5
"lib1","SARS-CoV-2","AATACACTCTGTGGAG",5,1.26,NA,NA,NA,NA,NA,NA,"stop","D98F L125*",2
"lib1","SARS-CoV-2","AATACACTGACAGAAG",1,11.09,10.5,-0.27,0.11,2.88,1,0.01,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","AATACACTTCAACATC",3,5.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G G116N R179K",3
"lib1","SARS-CoV-2","AATACAGAAAAGTTAA",7,0.54,NA,NA,NA,NA,NA,NA,"stop","A14E L38S T85* G166Q",4
"lib1","SARS-CoV-2","AATACAGATATACAAC",1,13.93,8.26,-2.5,0.26,1.5,1.11,0.03,">1 nonsynonymous","E10W R136Y",2
"lib1","SARS-CoV-2","AATACAGCAAGTACCA",5,31.71,10.54,-0.22,0.06,2.86,1.07,0,">1 nonsynonymous","G83N S129H A145V",3
"lib1","SARS-CoV-2","AATACAGCCGGTCCCA",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T N40H S113T",3
"lib1","SARS-CoV-2","AATACAGCTACATTGA",6,73.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48S T63V F167S Y178D",4
"lib1","SARS-CoV-2","AATACAGCTTGGGAAA",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127Y T140E",2
"lib1","SARS-CoV-2","AATACAGGAATGCGAA",6,82.83,8.08,-2.68,0.17,1.71,1.15,0.01,">1 nonsynonymous","I2Y F99W N110L S113I",4
"lib1","SARS-CoV-2","AATACAGGCCAGAAAA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","Y50* L95W F99L V103S V173M Y178F",6
"lib1","SARS-CoV-2","AATACAGGTAATAATC",7,43.66,9.49,-1.28,0.09,2.67,1.03,0,">1 nonsynonymous","Y39C G146T",2
"lib1","SARS-CoV-2","AATACAGGTAATAGAG",3,0.61,NA,NA,NA,NA,NA,NA,"stop","G86Y K94T W106* G146Y G152L A192T T201Y",7
"lib1","SARS-CoV-2","AATACAGTCCGTATAA",3,1.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATACATAGGACAGAC",2,9.46,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V71R V103R Y119V",3
"lib1","SARS-CoV-2","AATACATAGTTGCATA",2,28.22,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A33R P82R N110A L122F",4
"lib1","SARS-CoV-2","AATACATATTCTACAC",1,37.29,9.81,-0.95,0.17,2.01,1.04,0.01,">1 nonsynonymous","E10F S36M S139A T201Q",4
"lib1","SARS-CoV-2","AATACATCAGGGAAAG",6,121.08,10.13,-0.63,0.07,2.55,1.03,0,"1 nonsynonymous","P96H",1
"lib1","SARS-CoV-2","AATACATCATTTCTAC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","N4C G9S L38* Y50L G86D I142* Y175V",7
"lib1","SARS-CoV-2","AATACATCCAATTAAC",3,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86T S139L",2
"lib1","SARS-CoV-2","AATACATGACGCCGAA",5,8.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T46I K56N I104M N130F E135M L183F",6
"lib1","SARS-CoV-2","AATACATGCATAACAC",2,18.95,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L95K N120D",2
"lib1","SARS-CoV-2","AATACATGGCCAAAAA",5,53.77,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N1T V11T R136L Q144A F160T E186H",6
"lib1","SARS-CoV-2","AATACATGTGTGCACG",2,18.68,6.68,-4.09,0.48,1.5,1.1,0.08,">1 nonsynonymous","N4A I88W",2
"lib1","SARS-CoV-2","AATACATTAATTGTAG",2,31.76,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","AATACATTAGATTCCA",3,38.66,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L60P I88D K128L",3
"lib1","SARS-CoV-2","AATACATTATAACTCT",1,37.19,10.23,-0.54,0.08,2.86,1.03,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","AATACATTCATTCTTA",6,86.65,8.97,-1.8,0.15,1.71,1.2,0.01,">1 nonsynonymous","V37A G86E",2
"lib1","SARS-CoV-2","AATACATTCCGCTGGA",9,42.46,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","F17G D34V S53N Y91T N151Y",5
"lib1","SARS-CoV-2","AATACCAAAAGATAAT",2,24.32,9.19,-1.58,0.21,2.09,1.27,0.03,"1 nonsynonymous","Y165L",1
"lib1","SARS-CoV-2","AATACCAAACAGTGTT",2,118.43,10.79,0.02,0.04,2.9,1.05,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","AATACCAAATTACTAG",1,19.59,9.75,-1.02,0.04,2.93,1,0,">1 nonsynonymous","S43H A145F",2
"lib1","SARS-CoV-2","AATACCAAGAAGGGAT",7,108.4,7.67,-3.09,0.27,1.5,1.09,0.02,">1 nonsynonymous","F70L T100Y L188I",3
"lib1","SARS-CoV-2","AATACCAAGCGGGCCG",9,109.99,10.17,-0.59,0.09,2.6,1.06,0,"1 nonsynonymous","R25T",1
"lib1","SARS-CoV-2","AATACCAAGTTTATTG",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93K K94N L125C G155L",4
"lib1","SARS-CoV-2","AATACCAATGAATAGC",20,9.78,NA,NA,NA,NA,NA,NA,"stop","L5H W23A D34S P82* K132V I142* F156N",7
"lib1","SARS-CoV-2","AATACCACACATCACC",5,40.73,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","N40W C49V",2
"lib1","SARS-CoV-2","AATACCACATGTATGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R A42P A67R D90F G172V",5
"lib1","SARS-CoV-2","AATACCACCCAAGGGC",7,0,NA,NA,NA,NA,NA,NA,"stop","F17* P54R Y93V F156L",4
"lib1","SARS-CoV-2","AATACCACTAAAGTCA",1,33.12,9.75,-1.01,0.11,1.89,1.12,0,">1 nonsynonymous","C49F L60K",2
"lib1","SARS-CoV-2","AATACCACTAGCGTTA",6,40.06,6,-4.76,0.85,1.63,1.16,0.01,">1 nonsynonymous","I2F Y91K S108C Y119D R179T",5
"lib1","SARS-CoV-2","AATACCACTATGGGAA",9,164.23,10.85,0.08,0.05,2.9,1.04,0,">1 nonsynonymous","T55A N64S",2
"lib1","SARS-CoV-2","AATACCAGATTATACA",1,26.9,10.7,-0.06,0.11,2.89,1.03,0.01,">1 nonsynonymous","E10Q T140M",2
"lib1","SARS-CoV-2","AATACCAGGACTCAAA",8,101.68,6,-4.76,1.6,1.5,1.15,0.01,">1 nonsynonymous","E10N L131P N157L",3
"lib1","SARS-CoV-2","AATACCAGTCCCTATA",3,47.98,8.56,-2.2,0.22,1.5,1.07,0.02,">1 nonsynonymous","Y21L T85L",2
"lib1","SARS-CoV-2","AATACCATACCATTCA",7,109.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2K G86A Q163P",3
"lib1","SARS-CoV-2","AATACCATAGAAAAAT",2,25.9,8.62,-2.14,0.11,2.66,1.03,0,">1 nonsynonymous","S45R G117T",2
"lib1","SARS-CoV-2","AATACCATGTATAGAT",3,107.94,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37K I72Q P96A P149M Q176N",5
"lib1","SARS-CoV-2","AATACCATTTAATCAA",6,13.16,7.2,-3.56,0.45,1.5,1.15,0.06,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","AATACCATTTGTTAGT",6,16.24,10.72,-0.05,0.08,2.87,1.11,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","AATACCCAAAAGGTTG",7,65.37,10.64,-0.12,0.04,2.96,1.02,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AATACCCAACCCTATA",8,109.56,10.28,-0.49,0.04,2.88,1.02,0,">1 nonsynonymous","L60W F160L",2
"lib1","SARS-CoV-2","AATACCCAATGCAAAG",1,72.12,10.85,0.08,0.05,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACCCACCATCTGT",4,1.54,NA,NA,NA,NA,NA,NA,"stop","G83* S200L",2
"lib1","SARS-CoV-2","AATACCCCAATAGGAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D D90Y L95I T100Y",4
"lib1","SARS-CoV-2","AATACCCCACATCACC",1,44.34,10.76,0,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACCCCGCAGATTA",3,119.71,10.72,-0.04,0.05,2.86,1.08,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","AATACCCGAAAAAAAT",5,43.77,6.74,-4.03,0.29,1.5,1.1,0.01,">1 nonsynonymous","T15F C31L N157M L187G",4
"lib1","SARS-CoV-2","AATACCCGCAGGGTGG",1,19.49,10.72,-0.05,0.08,2.98,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AATACCCTCACTCCTC",5,121.6,6.66,-4.11,0.29,1.5,1.11,0.01,">1 nonsynonymous","Y143E G166R",2
"lib1","SARS-CoV-2","AATACCCTGTCCACTG",5,21.8,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R16L V103A",2
"lib1","SARS-CoV-2","AATACCCTTCTCCGAT",4,10.64,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F12I F99G V181R",3
"lib1","SARS-CoV-2","AATACCCTTTGAAGGT",5,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105E Y143L",2
"lib1","SARS-CoV-2","AATACCGACTATATAA",6,99.41,10.61,-0.15,0.03,2.89,1.04,0,">1 nonsynonymous","P7S Y66L",2
"lib1","SARS-CoV-2","AATACCGATATTCATA",2,2.65,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","AATACCGATCAAAATG",12,123.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G101M K128Y",2
"lib1","SARS-CoV-2","AATACCGCAAAGTGCC",8,179.48,10.63,-0.14,0.06,2.91,1.05,0,"1 nonsynonymous","P133G",1
"lib1","SARS-CoV-2","AATACCGGACAACCAG",2,6,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","C6L F12C K48L F99S S129D",5
"lib1","SARS-CoV-2","AATACCGGGATACCAG",9,3.37,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","AATACCTAAACACGAT",3,130.19,10.22,-0.55,0.07,2.76,1.03,0,">1 nonsynonymous","K128C P133A",2
"lib1","SARS-CoV-2","AATACCTACAGGGATC",4,109.87,10.77,0.01,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACCTACATCACCA",1,7.41,9.76,-1,0.16,2.22,1,0.01,">1 nonsynonymous","N4V D75G A89S",3
"lib1","SARS-CoV-2","AATACCTGACATTACA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","N13K L131* A145L N157K",4
"lib1","SARS-CoV-2","AATACCTGGAAAAATA",4,23.99,8.55,-2.22,0.29,1.85,1.24,0.04,">1 nonsynonymous","C6A F47A T55N",3
"lib1","SARS-CoV-2","AATACCTGGAGCAGCG",1,9.35,10.66,-0.11,0.07,2.94,1.01,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","AATACCTTATTTGAAT",3,32.93,6.12,-4.64,1.05,1.5,1.22,0.04,">1 nonsynonymous","I2A D59A N120L G146V V173E",5
"lib1","SARS-CoV-2","AATACCTTTTTATATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K A89V N107I",3
"lib1","SARS-CoV-2","AATACGAAGAATATAG",1,6.53,9.82,-0.94,0.48,1.96,1.14,0.02,">1 nonsynonymous","C6S F44G",2
"lib1","SARS-CoV-2","AATACGAATACTAGCG",1,2.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","AATACGACAGCCGAAA",3,96.9,8.54,-2.23,0.31,1.72,1.21,0.03,">1 nonsynonymous","S45Y Q176L",2
"lib1","SARS-CoV-2","AATACGACATGTTACA",4,54.89,7.46,-3.3,0.17,2.12,1.2,0.01,"1 nonsynonymous","Y175E",1
"lib1","SARS-CoV-2","AATACGACTCCATAAA",2,5.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","AATACGAGACCGTTAA",3,0.21,NA,NA,NA,NA,NA,NA,"stop","T100F I142* Y178L P191I",4
"lib1","SARS-CoV-2","AATACGAGTCAATTGA",7,65.07,7.72,-3.04,0.34,1.5,1.11,0.04,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","AATACGAGTCCTTTTC",2,4.71,NA,NA,NA,NA,NA,NA,"stop","D68R P161* T201H",3
"lib1","SARS-CoV-2","AATACGAGTGGAAACA",3,62.18,10.19,-0.57,0.06,2.89,1.01,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","AATACGATACACATGA",3,49.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39M C61V Y93N",3
"lib1","SARS-CoV-2","AATACGATACAGCGCG",4,141.31,9.45,-1.31,0.06,2.79,1.09,0,">1 nonsynonymous","Y119M T201S",2
"lib1","SARS-CoV-2","AATACGATGTCAAATT",4,33.55,7.87,-2.9,0.27,1.5,1,0.02,">1 nonsynonymous","C6Y N157R",2
"lib1","SARS-CoV-2","AATACGCAATAAAAAG",1,24.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E76S G152L",2
"lib1","SARS-CoV-2","AATACGCGGAACTAGA",4,16.77,8.98,-1.78,0.28,1.69,1.08,0.04,">1 nonsynonymous","A33T L122N R136S P149A",4
"lib1","SARS-CoV-2","AATACGCGTTGGAAAA",2,29.84,6,-4.76,1.86,1.5,1.14,0.01,">1 nonsynonymous","K26P T63I V103W N110S",4
"lib1","SARS-CoV-2","AATACGCTATGAAAAG",1,56.29,10.21,-0.55,0.05,2.95,1,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","AATACGCTCGACCATT",7,65.07,10.55,-0.21,0.03,2.92,1,0,">1 nonsynonymous","G9T A42I I138D",3
"lib1","SARS-CoV-2","AATACGGAAACCAGTA",1,65.4,10.81,0.05,0.12,2.73,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACGGAAACGTCAT",4,14.39,7.67,-3.09,0.73,1.5,1,0.07,">1 nonsynonymous","C6R F44V R73P F99S F185A",5
"lib1","SARS-CoV-2","AATACGGACAAGTGAA",2,54.15,10.41,-0.35,0.03,2.93,1.02,0,">1 nonsynonymous","R16L K87T F160G Q168R",4
"lib1","SARS-CoV-2","AATACGGCTAATGCTA",1,40.56,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V37S D137I G146L",3
"lib1","SARS-CoV-2","AATACGGGCAATAAAT",10,125.17,10.37,-0.39,0.05,2.91,1.01,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","AATACGGTTTTATTAG",4,80,6,-4.76,0.92,1.5,1.12,0.01,">1 nonsynonymous","N30V F62V F160H P177F",4
"lib1","SARS-CoV-2","AATACGTACAAACTTT",2,5.97,6.22,-4.54,1.31,1.5,1.17,0.03,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","AATACGTACTGATCGC",1,2.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y21R",1
"lib1","SARS-CoV-2","AATACGTATAGTTATA",1,2.85,NA,NA,NA,NA,NA,NA,"stop","G9Q K128* Y165P L183W T201E",5
"lib1","SARS-CoV-2","AATACGTCAACAGACG",3,13.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63F C102S",2
"lib1","SARS-CoV-2","AATACGTTAAAATGCA",3,37.53,6.27,-4.49,0.63,1.5,1.3,0.02,">1 nonsynonymous","E10F A18F F44T S129L",4
"lib1","SARS-CoV-2","AATACGTTCAAAAACA",5,56.87,7.34,-3.43,0.32,1.5,1.11,0.04,">1 nonsynonymous","L95C A105R",2
"lib1","SARS-CoV-2","AATACGTTTAATAGAA",6,2035.46,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F44L F70K A81I",3
"lib1","SARS-CoV-2","AATACGTTTAATTATT",11,421.79,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","V11D S45W Y119A",3
"lib1","SARS-CoV-2","AATACTAAACGAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56S P133* T140N",3
"lib1","SARS-CoV-2","AATACTAAATATGGAA",2,53.79,9.16,-1.61,0.09,2.62,1.11,0,">1 nonsynonymous","D97T G155I G174D",3
"lib1","SARS-CoV-2","AATACTAACAAGAACG",3,19.63,6,-4.76,1.55,3,1.18,0.01,">1 nonsynonymous","K26G K48A Y119C K198L",4
"lib1","SARS-CoV-2","AATACTAAGCTACTTA",2,18.88,6.01,-4.75,1.07,1.5,1.14,0.02,">1 nonsynonymous","R25K T55I I72E G101S F126C Y159L",6
"lib1","SARS-CoV-2","AATACTAATCGATTCG",2,1.62,NA,NA,NA,NA,NA,NA,"stop","F17Q T85G P149* Q168A P177W",5
"lib1","SARS-CoV-2","AATACTAATCTAAAAA",8,85.69,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F12C Y50A",2
"lib1","SARS-CoV-2","AATACTAATTGCGCTG",2,62.4,8.51,-2.25,0.16,2.09,1.13,0.01,">1 nonsynonymous","G9L T15L F44S Y119F",4
"lib1","SARS-CoV-2","AATACTAATTTCTATA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L P133N",2
"lib1","SARS-CoV-2","AATACTACAAAACCAG",3,48.89,10.6,-0.17,0.05,2.87,1.08,0,">1 nonsynonymous","C61Y K114W",2
"lib1","SARS-CoV-2","AATACTACATGTTTCA",2,14.87,10.49,-0.28,0.1,2.88,1.03,0,"1 nonsynonymous","R27L",1
"lib1","SARS-CoV-2","AATACTACTAATCATG",3,1.99,NA,NA,NA,NA,NA,NA,"stop","V37A L60* G155* G174S",4
"lib1","SARS-CoV-2","AATACTACTTATTCCG",2,19.31,6,-4.76,2,1.5,1.13,0.04,"1 nonsynonymous","P177R",1
"lib1","SARS-CoV-2","AATACTATAAAAAAGT",3,45.63,10.72,-0.05,0.05,2.93,1.01,0,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","AATACTATAAACAAGT",2,71.49,8.43,-2.34,0.29,1.5,1.08,0.03,">1 nonsynonymous","P7A S45A F62Y Y91I E141F T148R",6
"lib1","SARS-CoV-2","AATACTATCACAAGCA",1,0.75,NA,NA,NA,NA,NA,NA,"stop","I28K V71*",2
"lib1","SARS-CoV-2","AATACTATGCGTATTG",4,90.17,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S41G G116S C158R V173W",4
"lib1","SARS-CoV-2","AATACTATGGGAACGA",3,43.23,6.7,-4.06,0.53,1.5,1.2,0.04,">1 nonsynonymous","C31Y F44N E135W",3
"lib1","SARS-CoV-2","AATACTATTTCTAAAA",2,20.84,9.89,-0.87,0.16,2.17,1.17,0.01,">1 nonsynonymous","N30T K132P T201N",3
"lib1","SARS-CoV-2","AATACTCAATGTACTA",10,122.77,6,-4.76,1.98,1.5,1.17,0.01,">1 nonsynonymous","A33G K87Y R127P",3
"lib1","SARS-CoV-2","AATACTCCCTCCGGTT",10,29.54,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","I80F D97N W106K P149R",4
"lib1","SARS-CoV-2","AATACTCCGACACATA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105F G117R R127P T201L",4
"lib1","SARS-CoV-2","AATACTCCGATTATGT",1,25.41,6.25,-4.52,0.59,1.5,1.34,0.02,">1 nonsynonymous","L38R D59S D97M N118A",4
"lib1","SARS-CoV-2","AATACTCCGCCAAAAG",5,83.04,10.49,-0.27,0.09,2.78,1.05,0,">1 nonsynonymous","N4D T46N",2
"lib1","SARS-CoV-2","AATACTCGGATAATTT",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S41V R124N",3
"lib1","SARS-CoV-2","AATACTCGTACTTTGT",1,85.54,10.8,0.04,0.07,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AATACTCTAAAAGGAT",6,103.45,10.27,-0.49,0.06,2.96,1,0,">1 nonsynonymous","V37S K87R Y121L",3
"lib1","SARS-CoV-2","AATACTGAAACGCGCA",2,102.19,10.69,-0.07,0.04,2.96,1.01,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","AATACTGAAAGCGATC",1,45.55,7.87,-2.9,0.26,1.5,1.07,0.02,">1 nonsynonymous","A81V S129R N157T",3
"lib1","SARS-CoV-2","AATACTGATACGTGAC",3,107.75,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A89T P177S S184P K198S",4
"lib1","SARS-CoV-2","AATACTGATGTCCAGC",1,16.99,9.75,-1.01,0.32,1.53,1.11,0.07,">1 nonsynonymous","R127T T201L",2
"lib1","SARS-CoV-2","AATACTGCAATGACCC",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L D112F",2
"lib1","SARS-CoV-2","AATACTGTACCCATTA",2,12.86,10.42,-0.35,0.05,2.74,1.07,0,">1 nonsynonymous","K128I P149L",2
"lib1","SARS-CoV-2","AATACTGTAGATGCCC",7,59.03,6,-4.76,2,3,1.21,0,">1 nonsynonymous","A89R R124K K132R",3
"lib1","SARS-CoV-2","AATACTGTATGAACCT",5,162.28,6,-4.76,1.82,1.5,1.26,0.02,">1 nonsynonymous","K87S T148F G172C",3
"lib1","SARS-CoV-2","AATACTGTTACTCCCT",2,13.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19Q I28D",2
"lib1","SARS-CoV-2","AATACTGTTGTCCACA",4,35.39,6.3,-4.47,0.42,1.5,1.11,0.02,">1 nonsynonymous","G51T I142Y Q176L",3
"lib1","SARS-CoV-2","AATACTGTTTTACCCT",1,78.99,10.73,-0.03,0.08,2.94,1.04,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","AATACTTAACGTCGAA",4,30.65,6.13,-4.64,1.13,1.5,1.27,0.03,">1 nonsynonymous","N118L P161S",2
"lib1","SARS-CoV-2","AATACTTAACTCCCTC",3,5.01,11.04,0.27,0.11,3,1.01,0,">1 nonsynonymous","C61S A190S C195L",3
"lib1","SARS-CoV-2","AATACTTAGCTAAGAT",3,55.44,10.78,0.02,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACTTAGTACAGAT",6,1.17,NA,NA,NA,NA,NA,NA,"stop","V37* F47D S69R I88A N107* F156H",6
"lib1","SARS-CoV-2","AATACTTCAATTGGGG",1,41.38,10.89,0.13,0.09,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATACTTCGGACCATT",2,14.67,6,-4.76,2,3,1.27,0.02,">1 nonsynonymous","N13Y Y91D D137F",3
"lib1","SARS-CoV-2","AATACTTCGGGTTTTT",6,22.37,9.39,-1.38,0.2,1.74,1.06,0.02,">1 nonsynonymous","T100L W106L I138K L187K",4
"lib1","SARS-CoV-2","AATACTTCTTTCCTGC",8,57.07,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N13S D90Y G117K S164I",4
"lib1","SARS-CoV-2","AATACTTGAATCAAAT",8,99.83,6.17,-4.59,0.58,1.5,1.2,0.01,"1 nonsynonymous","V20W",1
"lib1","SARS-CoV-2","AATACTTGACCTAGCA",1,8.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96M N130D Q168S",3
"lib1","SARS-CoV-2","AATACTTGCATAAATG",2,30.39,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A14D S41P C49Q P82S K87M P149R",6
"lib1","SARS-CoV-2","AATACTTTGAATCCTT",1,34.29,6.32,-4.45,0.52,1.5,1.23,0.02,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","AATACTTTTGACACCG",5,84.22,10.15,-0.61,0.05,2.87,1,0,">1 nonsynonymous","A33P S164L",2
"lib1","SARS-CoV-2","AATAGAAAAAAATTCG",1,18.21,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","S53F K94C V115R L162S",4
"lib1","SARS-CoV-2","AATAGAAAAGAGGCGA",1,17.96,8.07,-2.7,0.19,2.64,1.27,0.02,">1 nonsynonymous","I2V F8L V65T G166E T201M",5
"lib1","SARS-CoV-2","AATAGAAAATACTCTG",5,27.28,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y93A K114Q N157L",3
"lib1","SARS-CoV-2","AATAGAAAATGACTAG",4,64.36,10.48,-0.29,0.06,2.92,1.05,0,">1 nonsynonymous","G9L G51N",2
"lib1","SARS-CoV-2","AATAGAAAATGGGACA",7,42.19,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","N92L Y123M",2
"lib1","SARS-CoV-2","AATAGAAACTGGACTA",4,22.92,10.69,-0.08,0.05,2.92,1.06,0,">1 nonsynonymous","T3S A33T T63R",3
"lib1","SARS-CoV-2","AATAGAAAGGCTATAA",7,27.85,6.8,-3.96,0.3,1.5,1.17,0.02,">1 nonsynonymous","E76K P169G",2
"lib1","SARS-CoV-2","AATAGAAATTGCATGT",3,21.44,10.93,0.17,0.1,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGAACAAATTTCC",5,9.35,7.08,-3.69,0.4,1.5,1.07,0.03,">1 nonsynonymous","L57S L122T K132L V181M",4
"lib1","SARS-CoV-2","AATAGAACAGCTTATG",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y N40M R124A",3
"lib1","SARS-CoV-2","AATAGAACCACCACTA",1,42.39,10.88,0.11,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGAACGATGTCCT",10,236.61,10.77,0.01,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGAACGCTCACGC",1,44.28,10.69,-0.07,0.1,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGAACTAATCTTA",2,86.28,10.64,-0.13,0.12,2.66,1,0.01,"1 nonsynonymous","F44D",1
"lib1","SARS-CoV-2","AATAGAACTAGGAGTC",4,51.53,9.71,-1.06,0.14,1.92,1.09,0.01,">1 nonsynonymous","G83Y D90S D97C",3
"lib1","SARS-CoV-2","AATAGAACTTACATAG",9,3.77,NA,NA,NA,NA,NA,NA,"stop","E10* C61Y",2
"lib1","SARS-CoV-2","AATAGAAGAAATGTGC",2,65.08,9.87,-0.9,0.1,2.6,1.06,0,">1 nonsynonymous","N92S S129R",2
"lib1","SARS-CoV-2","AATAGAAGGATACCTA",1,9.85,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","D68V G86V V115I E135L",4
"lib1","SARS-CoV-2","AATAGAAGTAAGAGTG",5,38.32,10.33,-0.44,0.12,2.8,1,0.01,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AATAGAAGTATTTACT",11,69.04,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64T R73T G101R G152T",4
"lib1","SARS-CoV-2","AATAGAAGTCATCAAG",1,19.39,10.65,-0.11,0.12,2.94,1.02,0.01,"1 nonsynonymous","I138F",1
"lib1","SARS-CoV-2","AATAGAAGTGAACAGA",3,15.31,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C6A Y165S",2
"lib1","SARS-CoV-2","AATAGAATAAACAACC",3,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L C49S T63L P82Y P96M W106L",6
"lib1","SARS-CoV-2","AATAGAATGGATTGAA",1,7.25,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N13C P54K P177E",3
"lib1","SARS-CoV-2","AATAGAATTAAATCCC",1,9.46,7.05,-3.72,0.67,1.5,1.07,0.04,">1 nonsynonymous","T55V Y66L L125D F156G",4
"lib1","SARS-CoV-2","AATAGAATTACTTAAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C6V Y93S L122* V180S",4
"lib1","SARS-CoV-2","AATAGAATTCCATAAA",2,24.29,6.84,-3.92,0.28,1.5,1.17,0.01,">1 nonsynonymous","G74A D90R D97Y T201K",4
"lib1","SARS-CoV-2","AATAGACAACAAGATG",12,51.21,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A67D W106G",2
"lib1","SARS-CoV-2","AATAGACAAGATACAC",1,9.64,9.26,-1.51,0.19,2.25,1.07,0.01,">1 nonsynonymous","D34I E154V",2
"lib1","SARS-CoV-2","AATAGACAAGGCACAC",7,61.56,6,-4.76,1,1.5,1.16,0.01,">1 nonsynonymous","Y39M D68G G166I",3
"lib1","SARS-CoV-2","AATAGACAGGTTCCCA",2,17.01,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N13D S19P Y35C G86M D112W",5
"lib1","SARS-CoV-2","AATAGACATACAGTTA",4,45.52,10.64,-0.12,0.05,2.88,1.07,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","AATAGACATATCTCTA",2,46.92,9.44,-1.33,0.1,2.24,1.12,0,"1 nonsynonymous","N107V",1
"lib1","SARS-CoV-2","AATAGACCACAAATAC",4,124.62,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F44P A67T Y91F W106D L122S",5
"lib1","SARS-CoV-2","AATAGACCTACAATTA",6,49.67,8.94,-1.83,0.11,2.38,1.16,0.01,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","AATAGACCTTTAGCTA",2,52.84,10.8,0.03,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGACGCACGGAAA",2,65.47,9.88,-0.89,0.1,2.46,1.07,0,">1 nonsynonymous","T63K Q84L T100N",3
"lib1","SARS-CoV-2","AATAGACGCGGACTAA",4,8.32,9.55,-1.22,0.18,1.91,1.06,0.01,">1 nonsynonymous","L57E F185Q",2
"lib1","SARS-CoV-2","AATAGACGCGTAAAAG",1,20.8,6,-4.76,1.25,1.5,1.18,0.03,">1 nonsynonymous","I88S D97K",2
"lib1","SARS-CoV-2","AATAGACGCTATATAT",4,27.94,6,-4.76,2,3,1.08,0,">1 nonsynonymous","F44Y S113L P161Q",3
"lib1","SARS-CoV-2","AATAGACGTAGTATTA",8,1.47,NA,NA,NA,NA,NA,NA,"stop","I88E D98E V182*",3
"lib1","SARS-CoV-2","AATAGACGTTGCCACG",6,0.55,NA,NA,NA,NA,NA,NA,"stop","I28* Y35R S45I K56R W106T G146N H189L",7
"lib1","SARS-CoV-2","AATAGACTAAATTCAA",7,61.26,10.65,-0.11,0.05,2.89,1.08,0,">1 nonsynonymous","N40R D97L",2
"lib1","SARS-CoV-2","AATAGACTAACAATCG",4,42.53,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A22T S29G V37G L60E W106C N107H",6
"lib1","SARS-CoV-2","AATAGACTAATTAATG",1,6.98,6.21,-4.55,0.55,1.5,1.03,0.02,">1 nonsynonymous","F47Y W106V K114L N151S",4
"lib1","SARS-CoV-2","AATAGACTAGGTGAAG",1,18.94,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C61R K94H G146P",3
"lib1","SARS-CoV-2","AATAGACTTCTCTTAT",1,85.08,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I88C N107I Q176H",3
"lib1","SARS-CoV-2","AATAGAGATAACAGGG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70S L122N",2
"lib1","SARS-CoV-2","AATAGAGATTCTGTGT",4,97.75,10.7,-0.06,0.06,2.95,1.02,0,">1 nonsynonymous","A22M S43M K128H",3
"lib1","SARS-CoV-2","AATAGAGCAATGAACT",5,1.38,NA,NA,NA,NA,NA,NA,"stop","G51Y G86I V103* G117P",4
"lib1","SARS-CoV-2","AATAGAGCAGGCCATG",3,37.08,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S29I V103S K128N F185H",4
"lib1","SARS-CoV-2","AATAGAGCCACAACGC",1,6.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35L S41I I142L Q168Y",4
"lib1","SARS-CoV-2","AATAGAGCGGACGAGG",6,47.59,6,-4.76,2,3,1.21,0,">1 nonsynonymous","D75R T85Y G117R F167N",4
"lib1","SARS-CoV-2","AATAGAGCTAATTAAC",1,29.65,10.11,-0.65,0.12,2.58,1.13,0.01,">1 nonsynonymous","N24L P191N",2
"lib1","SARS-CoV-2","AATAGAGGAAACTTGG",9,83.49,9.49,-1.27,0.14,1.57,1.13,0.01,">1 nonsynonymous","C49L S184Y",2
"lib1","SARS-CoV-2","AATAGAGGTAATCAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F70Q P96W G101N G146* L183A",5
"lib1","SARS-CoV-2","AATAGAGGTGGGCTTC",5,43.52,6,-4.76,1.45,1.5,1.19,0.02,">1 nonsynonymous","F8S V37T T55I N107A N118A E135M",6
"lib1","SARS-CoV-2","AATAGAGTAAAGCACA",3,3.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122D",1
"lib1","SARS-CoV-2","AATAGAGTGAATACAG",7,54.69,8.43,-2.33,0.09,2.45,1.09,0,">1 nonsynonymous","G116M F126A P149H T201R",4
"lib1","SARS-CoV-2","AATAGAGTTGGCGCAA",4,121.22,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F62R F167G P177G",3
"lib1","SARS-CoV-2","AATAGATAACAAACGG",3,29.18,10.71,-0.05,0.05,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGATAAGCTTAGC",1,46.62,10.04,-0.73,0.1,2.57,1.05,0,">1 nonsynonymous","L57S E141S",2
"lib1","SARS-CoV-2","AATAGATACAGATAAA",3,8.65,6,-4.76,2,1.5,1.04,0.01,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","AATAGATACCCACTTA",1,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T D90L L95R",3
"lib1","SARS-CoV-2","AATAGATATATTGAAT",2,31.73,10.87,0.11,0.08,2.9,1.04,0,">1 nonsynonymous","A89C L122K",2
"lib1","SARS-CoV-2","AATAGATATCCAAACA",5,53.07,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G74C W106R C158P",3
"lib1","SARS-CoV-2","AATAGATCCCGTTTGC",3,51.9,6.19,-4.57,0.55,1.5,1.09,0.01,">1 nonsynonymous","N24A P54E G155T Y165A",4
"lib1","SARS-CoV-2","AATAGATGAGACAATA",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T W106L",2
"lib1","SARS-CoV-2","AATAGATTAGCGAGAC",4,16.63,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","A14P G174V Y178S",3
"lib1","SARS-CoV-2","AATAGATTATGGTATC",2,39.34,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37D A42N R136M V181Q",4
"lib1","SARS-CoV-2","AATAGCAAAAACCCAG",8,61.72,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","K94L Y119V V173G",3
"lib1","SARS-CoV-2","AATAGCAAAACAAATA",7,76.58,8.92,-1.84,0.17,1.65,1.2,0.01,">1 nonsynonymous","V65L K128L P177S",3
"lib1","SARS-CoV-2","AATAGCAACCCCCTAC",2,13.17,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","E10I I72S N171R V180S",4
"lib1","SARS-CoV-2","AATAGCAACTACCAAA",2,13.39,6,-4.76,0.45,1.75,1.06,0,">1 nonsynonymous","N92G A105F N110M S200I",4
"lib1","SARS-CoV-2","AATAGCAAGGCTTACT",5,39.83,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","S19R T100S N110L N120I R136E G155R",6
"lib1","SARS-CoV-2","AATAGCACAATCTCGT",1,9.99,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68T D98F F160H T201A",4
"lib1","SARS-CoV-2","AATAGCACAGGTGCCC",1,16.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5G I104N I142S",3
"lib1","SARS-CoV-2","AATAGCACCACGTATA",11,9.73,NA,NA,NA,NA,NA,NA,"stop","G86* N171I",2
"lib1","SARS-CoV-2","AATAGCAGACGGGAAC",1,7.36,8.52,-2.24,0.19,1.5,1.18,0.02,">1 nonsynonymous","T3A N120Y Y165W",3
"lib1","SARS-CoV-2","AATAGCAGATATGATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G V103T G174W L183K",4
"lib1","SARS-CoV-2","AATAGCAGGCATCCTC",6,76.34,10.79,0.03,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGCAGGGCCGTAA",3,14.61,6.32,-4.44,0.61,1.5,1.16,0.02,">1 nonsynonymous","I80G D90S A105L F126Y Q144K",5
"lib1","SARS-CoV-2","AATAGCAGGTCCATAT",9,75.54,6.09,-4.67,0.68,1.5,1.16,0.01,">1 nonsynonymous","D68F A105M H189S",3
"lib1","SARS-CoV-2","AATAGCATAAGCACAG",5,70.38,9.88,-0.88,0.05,2.8,1.08,0,">1 nonsynonymous","G9Y T85V Q168G",3
"lib1","SARS-CoV-2","AATAGCATAATGCAGT",3,19.06,9.91,-0.86,0.15,2.37,1,0.01,">1 nonsynonymous","A33R S41G",2
"lib1","SARS-CoV-2","AATAGCATATACACCA",13,167.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N13R V32S L38T G86E G117M F160I",6
"lib1","SARS-CoV-2","AATAGCATCCCTTAAT",2,34.61,10.26,-0.5,0.08,2.93,1.04,0,">1 nonsynonymous","I2S N64Y K87A",3
"lib1","SARS-CoV-2","AATAGCATCTGAATAT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F I28P F62A I142M K199F",5
"lib1","SARS-CoV-2","AATAGCATTTAAGGCA",1,33.91,10.21,-0.56,0.08,2.89,1,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","AATAGCCACTGAATAT",9,114.35,9.91,-0.86,0.09,2.27,1.03,0,">1 nonsynonymous","L57N F160L",2
"lib1","SARS-CoV-2","AATAGCCCCAGTATAT",3,8.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28P F44S A89T D97T E135D P191R",6
"lib1","SARS-CoV-2","AATAGCCCCGAATCTG",4,164.53,8.23,-2.53,0.13,1.7,1.14,0.01,">1 nonsynonymous","S29K N107R Q168L",3
"lib1","SARS-CoV-2","AATAGCCCCGCAATAC",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C L60S K87I T140H",4
"lib1","SARS-CoV-2","AATAGCCCTGCTTTGA",4,60.66,10.01,-0.75,0.06,2.89,1.03,0,"1 nonsynonymous","L125S",1
"lib1","SARS-CoV-2","AATAGCCGTTAAGAAG",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M G117Y",2
"lib1","SARS-CoV-2","AATAGCCTTAAATATA",1,26.57,10.26,-0.51,0.11,2.6,1,0.01,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","AATAGCGCCTAAAAGC",3,20.44,10.47,-0.29,0.13,2.69,1.21,0.01,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","AATAGCGGAACGGAAT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","Y50* Q79K Q176R",3
"lib1","SARS-CoV-2","AATAGCGGCAAAACAT",3,20.1,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A14T Y21L P161S K199N",4
"lib1","SARS-CoV-2","AATAGCGTAACTTTTG",1,34.6,7.4,-3.36,0.19,1.5,1.11,0.01,">1 nonsynonymous","G51I Q176N",2
"lib1","SARS-CoV-2","AATAGCGTATAGCGGA",3,20.51,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A81D K94G T140Y T201M",4
"lib1","SARS-CoV-2","AATAGCTAACTGCGAG",12,107.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10L N118C I142G P149L",4
"lib1","SARS-CoV-2","AATAGCTAATATAACC",1,15.63,6.11,-4.66,1.2,1.5,1.34,0.04,">1 nonsynonymous","F12L P133M V173C",3
"lib1","SARS-CoV-2","AATAGCTACTCCCAAT",7,148.41,10.55,-0.22,0.04,2.92,1.01,0,">1 nonsynonymous","T15R D97L N110E",3
"lib1","SARS-CoV-2","AATAGCTATTATGAAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","R27* D59N L122I T170S",4
"lib1","SARS-CoV-2","AATAGCTCCGGTTAGC",1,24.94,6.24,-4.52,1.24,1.5,1.26,0.07,">1 nonsynonymous","N120S T140Q N157I",3
"lib1","SARS-CoV-2","AATAGCTCTGTTAGCA",3,19.32,6.15,-4.62,1.14,1.5,1.21,0.04,">1 nonsynonymous","G9P V71R T100H",3
"lib1","SARS-CoV-2","AATAGCTTAAAGACCC",9,59.95,10.33,-0.43,0.04,2.86,1.04,0,">1 nonsynonymous","L38M E186T",2
"lib1","SARS-CoV-2","AATAGCTTGCCGTTAG",4,13.28,10.8,0.04,0.06,2.97,1,0,"1 nonsynonymous","V173N",1
"lib1","SARS-CoV-2","AATAGCTTTGAAATTA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","A18R Y50* I142T N157P V181P",5
"lib1","SARS-CoV-2","AATAGGAAAATTGAAA",3,79.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S29V V37S G101C N107C R127S",5
"lib1","SARS-CoV-2","AATAGGAAATATAACC",2,0.54,NA,NA,NA,NA,NA,NA,"stop","D68* N151M",2
"lib1","SARS-CoV-2","AATAGGAAGGGTGTCT",3,100.92,9.95,-0.82,0.08,2.42,1.04,0,">1 nonsynonymous","C6S S36F",2
"lib1","SARS-CoV-2","AATAGGAATGAATATC",6,93.6,10.78,0.01,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGGACCGTTAATT",3,28.77,8.24,-2.53,0.25,1.5,1.05,0.02,">1 nonsynonymous","C49I Y119T F160W",3
"lib1","SARS-CoV-2","AATAGGACGCACAAAC",1,1.18,NA,NA,NA,NA,NA,NA,"stop","E10R T55F K87R Y123I K128Q G146*",6
"lib1","SARS-CoV-2","AATAGGACTGCTAAAT",4,79.19,8.42,-2.34,0.3,1.5,1.07,0.04,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","AATAGGACTTGTTATA",9,154.63,8.85,-1.92,0.17,1.5,1.1,0.01,">1 nonsynonymous","Y39L P96K R136L",3
"lib1","SARS-CoV-2","AATAGGAGCCATTAGA",5,0.04,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","AATAGGATGGAACGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K L95S Y121G",3
"lib1","SARS-CoV-2","AATAGGATTAACCATG",3,0.46,NA,NA,NA,NA,NA,NA,"stop","K56A V115L V182*",3
"lib1","SARS-CoV-2","AATAGGCAATATGAGA",3,13.14,6.54,-4.22,0.44,1.5,1.08,0.01,">1 nonsynonymous","G9F Y119C P161T",3
"lib1","SARS-CoV-2","AATAGGCAGAATCACA",1,18.23,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N30W V52L G74C F99S N130W",5
"lib1","SARS-CoV-2","AATAGGCATATCATCG",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T C102G G155V",3
"lib1","SARS-CoV-2","AATAGGCCCCCTACAG",9,100.95,10.33,-0.43,0.05,2.88,1.04,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","AATAGGCGAATGAAAT",1,32.55,6.75,-4.01,0.5,1.5,1.2,0.03,">1 nonsynonymous","T15P C158E",2
"lib1","SARS-CoV-2","AATAGGCGAATTTAAA",2,14.34,6.87,-3.89,0.43,1.5,1.09,0.05,"1 nonsynonymous","G101M",1
"lib1","SARS-CoV-2","AATAGGCGACCAGTTA",1,134.51,10.65,-0.11,0.05,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGGCGATCAACAA",3,41.53,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C6Q D137T",2
"lib1","SARS-CoV-2","AATAGGGAAGCCTACT",4,0.97,NA,NA,NA,NA,NA,NA,"stop","F47* K56L D137N S200M",4
"lib1","SARS-CoV-2","AATAGGGACAACGCAC",1,0.42,NA,NA,NA,NA,NA,NA,"stop","L95H Y119* L131I I142H",4
"lib1","SARS-CoV-2","AATAGGGAGAAGATGT",4,83.96,10.66,-0.11,0.03,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATAGGGCAAAAACGA",2,13.77,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T3K G86D P133K Y143N",4
"lib1","SARS-CoV-2","AATAGGGCAATCACAT",2,5.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K V32Y L57Q P197D",4
"lib1","SARS-CoV-2","AATAGGGGAAAATTTC",1,12.68,10.47,-0.29,0.11,2.86,1.02,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","AATAGGGGTGGCTCAG",2,15.35,10.68,-0.08,0.09,2.81,1.12,0,">1 nonsynonymous","V37Y I142L",2
"lib1","SARS-CoV-2","AATAGGTAAAACGGCT",6,47.2,10.21,-0.55,0.06,2.81,1.05,0,">1 nonsynonymous","T3Q S36C",2
"lib1","SARS-CoV-2","AATAGGTAATACACTT",4,44.6,6.06,-4.7,1.16,1.5,1.19,0.03,">1 nonsynonymous","P7N F17G P96H",3
"lib1","SARS-CoV-2","AATAGGTCAAATGTCC",9,0.46,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AATAGGTCCAAACAAT",2,29.91,8.48,-2.28,0.12,2.9,1.04,0.01,">1 nonsynonymous","N110L Q168K P191S",3
"lib1","SARS-CoV-2","AATAGGTGAGACAACG",3,20.66,6.73,-4.04,0.45,1.5,1.1,0.04,">1 nonsynonymous","V32Q N40Y D68K",3
"lib1","SARS-CoV-2","AATAGGTTAAAATTCG",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102L N120M E135P",3
"lib1","SARS-CoV-2","AATAGGTTAATGCAAA",6,124.17,10.63,-0.14,0.08,2.84,1.11,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","AATAGGTTGCTCTCCC",3,105.17,10.71,-0.05,0.06,2.87,1.06,0,">1 nonsynonymous","F62T G83K",2
"lib1","SARS-CoV-2","AATAGTAAAAGATGCT",2,10.89,10.57,-0.19,0.07,2.86,1.12,0,"1 nonsynonymous","R78V",1
"lib1","SARS-CoV-2","AATAGTAAACTCCTAT",6,155.92,10.77,0,0.06,2.94,1.03,0,"1 nonsynonymous","N24H",1
"lib1","SARS-CoV-2","AATAGTAACATACTTG",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87D V103G",2
"lib1","SARS-CoV-2","AATAGTAACTTTCCAA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","L5S V37* P96W H189D",4
"lib1","SARS-CoV-2","AATAGTACCAACGCCT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q N58S G83M E154Y",4
"lib1","SARS-CoV-2","AATAGTACGATAACGA",10,52.43,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F62D I80S K94S",3
"lib1","SARS-CoV-2","AATAGTACTGAGGTAT",2,7.62,7.43,-3.34,0.3,1.5,1.05,0.01,">1 nonsynonymous","C6E G86S",2
"lib1","SARS-CoV-2","AATAGTATAGCCAAGT",1,12.01,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S19Q V37E V103N",3
"lib1","SARS-CoV-2","AATAGTCAAAGCAAGA",9,127.96,10.07,-0.69,0.09,2.09,1.03,0,"1 nonsynonymous","G51W",1
"lib1","SARS-CoV-2","AATAGTCAAATGCCTT",3,29.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35L N64D I80T Y91K",4
"lib1","SARS-CoV-2","AATAGTCAACTGGTAT",6,61.62,10.61,-0.15,0.06,2.9,1.03,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","AATAGTCACAGATAAA",3,109.68,10.72,-0.05,0.07,2.88,1.05,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","AATAGTCACGGATCAG",6,25.1,8.62,-2.14,0.11,2.99,1.06,0,"1 nonsynonymous","N157K",1
"lib1","SARS-CoV-2","AATAGTCACTAGCAAG",2,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Q Y165L",2
"lib1","SARS-CoV-2","AATAGTCACTGCAAAC",4,1.03,NA,NA,NA,NA,NA,NA,"stop","Y39W D90R T100* S113Q C150S C158Y F167L",7
"lib1","SARS-CoV-2","AATAGTCATATTGTCT",3,1.88,NA,NA,NA,NA,NA,NA,"stop","N4S C49V D68* Q79N Y143L",5
"lib1","SARS-CoV-2","AATAGTCATTAATCAG",7,4.36,NA,NA,NA,NA,NA,NA,"stop","F8H V52W A67D L122* V180W",5
"lib1","SARS-CoV-2","AATAGTCATTGATGGG",4,18.38,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V20W D97L",2
"lib1","SARS-CoV-2","AATAGTCCCGACTCAG",2,13.06,6.15,-4.62,1.42,1.5,1.12,0.05,">1 nonsynonymous","Y121F A145C Y159R G166L Y175R",5
"lib1","SARS-CoV-2","AATAGTCCGGGAGACA",2,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S45C N157V",3
"lib1","SARS-CoV-2","AATAGTCCTAACGAAG",2,39.97,10.66,-0.1,0.06,2.83,1.09,0,">1 nonsynonymous","S36Q L95M S184T",3
"lib1","SARS-CoV-2","AATAGTCCTAATCTAT",7,1.06,NA,NA,NA,NA,NA,NA,"stop","A81G L95V N107R L122W C158* T201V",6
"lib1","SARS-CoV-2","AATAGTCCTTAAAAGT",2,30.41,9.75,-1.01,0.39,1.5,1,0.06,">1 nonsynonymous","K94I E141R",2
"lib1","SARS-CoV-2","AATAGTCCTTAATTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","A33Y C195*",2
"lib1","SARS-CoV-2","AATAGTCGAAAGTGCC",3,48.44,10.33,-0.44,0.05,2.91,1.02,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","AATAGTCGAGACCAGG",2,25.52,9.82,-0.95,0.11,2.42,1,0,">1 nonsynonymous","P96A G152L",2
"lib1","SARS-CoV-2","AATAGTCGATTCCGGA",2,13.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V52A F62T D90T",3
"lib1","SARS-CoV-2","AATAGTCGCCCAGGTG",1,0.34,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","AATAGTCGGTACTGTG",2,12.74,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K26A P54M D90H V103F C150Y",5
"lib1","SARS-CoV-2","AATAGTGACTCCTAAA",1,15.29,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T63A A89K G155L",3
"lib1","SARS-CoV-2","AATAGTGACTGGGTAC",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L T15S Y35R T100A E141A",5
"lib1","SARS-CoV-2","AATAGTGCAAATCTAT",1,34.3,9.19,-1.57,0.26,1.53,1.19,0.03,">1 nonsynonymous","V11G D90K",2
"lib1","SARS-CoV-2","AATAGTGCACTCAAGT",5,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72T A89S G152R",3
"lib1","SARS-CoV-2","AATAGTGGAAGCCAGT",4,81.94,10.7,-0.06,0.05,2.89,1.05,0,">1 nonsynonymous","K56S D90S",2
"lib1","SARS-CoV-2","AATAGTTAATAATCCC",2,15.67,10.74,-0.03,0.13,2.74,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATAGTTAGGAACTCA",1,9.65,6.08,-4.69,1.57,1.5,1.3,0.07,">1 nonsynonymous","I2S S69E Q163W",3
"lib1","SARS-CoV-2","AATAGTTATAGAACCC",3,9.58,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","N58V V103L N120V S184D",4
"lib1","SARS-CoV-2","AATAGTTCAAACTTGT",1,14.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y91T F99N L122S",3
"lib1","SARS-CoV-2","AATAGTTGGACGGGGT",4,80.51,10.63,-0.14,0.08,2.9,1.06,0,">1 nonsynonymous","A33F T140K K199E",3
"lib1","SARS-CoV-2","AATAGTTTCTCATGAT",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S L60S K94R",3
"lib1","SARS-CoV-2","AATAGTTTGGTTACCA",3,46.83,8.48,-2.29,0.18,1.5,1,0.02,">1 nonsynonymous","F8G S129H E135S",3
"lib1","SARS-CoV-2","AATATAAAAAAGATTA",2,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R K87C F185N",3
"lib1","SARS-CoV-2","AATATAAAAATTATCC",1,5.85,8.98,-1.78,0.24,1.91,1.08,0.02,">1 nonsynonymous","L38S L122T N130G",3
"lib1","SARS-CoV-2","AATATAAAATTCCAAC",9,176.05,10.77,0,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATAAAGATAAAAT",2,18.85,9.39,-1.38,0.29,1.5,1.18,0.04,">1 nonsynonymous","Y178I E186I",2
"lib1","SARS-CoV-2","AATATAAAGTGCAATA",3,31.94,10.14,-0.62,0.07,2.91,1,0,">1 nonsynonymous","I2A E10V D98H",3
"lib1","SARS-CoV-2","AATATAAATACTGATG",3,34.99,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14V D34A R136P P161N",4
"lib1","SARS-CoV-2","AATATAAATATACCCG",1,10.86,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14Y N92K D112L G117D",4
"lib1","SARS-CoV-2","AATATAAATATATAAG",8,66.37,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","G83F Y93K",2
"lib1","SARS-CoV-2","AATATAAATGATCGAC",12,114.87,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E10R I88G N118I",3
"lib1","SARS-CoV-2","AATATAACAAACATAA",2,132.67,10.48,-0.29,0.03,2.9,1.04,0,"1 nonsynonymous","Q176N",1
"lib1","SARS-CoV-2","AATATAACCAGCCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* P149R",2
"lib1","SARS-CoV-2","AATATAACGAACATCA",2,0.64,NA,NA,NA,NA,NA,NA,"stop","P54L Q79P Q84* Y119N F167S",5
"lib1","SARS-CoV-2","AATATAACGTAATAAC",4,26.31,10.79,0.03,0.06,2.93,1.02,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AATATAACGTACTCAT",5,154.09,10.63,-0.14,0.03,2.95,1.02,0,">1 nonsynonymous","N64Y K87F",2
"lib1","SARS-CoV-2","AATATAACTATTATTT",7,85.28,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9I Y35T F44T C49S A81E I104W E135R",7
"lib1","SARS-CoV-2","AATATAAGAATAACAA",4,32.92,6.28,-4.49,0.67,1.5,1.1,0.02,">1 nonsynonymous","C6R A105L",2
"lib1","SARS-CoV-2","AATATAAGAGATCGTA",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E K56V C61T P82L D98I",5
"lib1","SARS-CoV-2","AATATAAGATTATTCT",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A L57R V103N T148N Q163E",5
"lib1","SARS-CoV-2","AATATAAGCGCAGTAA",14,148.91,8.35,-2.42,0.14,1.5,1.12,0.01,">1 nonsynonymous","L5W C61E D90N C102M E154L",5
"lib1","SARS-CoV-2","AATATAAGCTACTCCG",4,3.33,NA,NA,NA,NA,NA,NA,"stop","L60K I104F I142*",3
"lib1","SARS-CoV-2","AATATAAGTTAAAAAT",4,2.05,NA,NA,NA,NA,NA,NA,"stop","F8V A81* L95Q G117S G152V Q168N",6
"lib1","SARS-CoV-2","AATATAAGTTGCAAAA",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G A33L V115I",3
"lib1","SARS-CoV-2","AATATAATAAACCAAT",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H C61E Y178R L188K",4
"lib1","SARS-CoV-2","AATATAATAAAGCAAA",9,85.44,8.58,-2.19,0.17,1.9,1.17,0.01,">1 nonsynonymous","L38M C61R N118T E141L",4
"lib1","SARS-CoV-2","AATATAATAACATCGA",1,6.89,6,-4.76,2,3,1.03,0,">1 nonsynonymous","C6I P161A V182P",3
"lib1","SARS-CoV-2","AATATAATATAATTAG",5,93.63,8.54,-2.22,0.09,2.51,1.09,0,">1 nonsynonymous","T3A S43T S113K",3
"lib1","SARS-CoV-2","AATATAATATGAAAAT",4,104.05,10.65,-0.11,0.08,2.88,1.08,0,">1 nonsynonymous","T148N T201N",2
"lib1","SARS-CoV-2","AATATAATCGATGCCA",1,6.49,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","L57D P82V Y93L P177L",4
"lib1","SARS-CoV-2","AATATAATGAGGGACT",4,8.58,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6R D59Y L183Q",3
"lib1","SARS-CoV-2","AATATAATGATATTGA",19,105.19,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","A14W I88P Y119D P133F",4
"lib1","SARS-CoV-2","AATATAATTACAATGA",3,14.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N92H G101T S129V P149N",4
"lib1","SARS-CoV-2","AATATAATTCCTATCT",13,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D C49G",2
"lib1","SARS-CoV-2","AATATAATTGATCACT",10,90.4,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","E10V D137S N157L",3
"lib1","SARS-CoV-2","AATATAATTGTTCTAC",2,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S L57A F160G",3
"lib1","SARS-CoV-2","AATATAATTTAAATGT",3,15.32,10.77,0.01,0.1,2.8,1.18,0,">1 nonsynonymous","Q163S T201Y",2
"lib1","SARS-CoV-2","AATATAATTTATGGAT",2,29.34,10.88,0.11,0.09,2.92,1.04,0,"1 nonsynonymous","N130Q",1
"lib1","SARS-CoV-2","AATATAATTTTAAAAA",1,34.95,9.96,-0.81,0.08,2.56,1.08,0,">1 nonsynonymous","T3N L57K",2
"lib1","SARS-CoV-2","AATATACAACAGGGAT",2,51.07,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C102T T170N",2
"lib1","SARS-CoV-2","AATATACACAATGTGG",5,56.68,9.11,-1.66,0.07,2.8,1.1,0,">1 nonsynonymous","V52I E141S G166M",3
"lib1","SARS-CoV-2","AATATACACAGGGACA",5,28.49,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F8M S29E Y91I G116Q D137S",5
"lib1","SARS-CoV-2","AATATACATAACCAAG",2,17.99,9.59,-1.18,0.29,1.5,1.18,0.04,">1 nonsynonymous","A22S A33G A42Y L60R I104Y I138K",6
"lib1","SARS-CoV-2","AATATACATAAGAAAT",3,61.02,10.39,-0.37,0.05,2.9,1,0,"1 nonsynonymous","N24Y",1
"lib1","SARS-CoV-2","AATATACATACGTAAT",7,16.69,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E10G V65D P96L S129R E141W F156E",6
"lib1","SARS-CoV-2","AATATACATGATAAAT",7,122.98,10.61,-0.16,0.03,2.92,1.01,0,">1 nonsynonymous","S41P S200L",2
"lib1","SARS-CoV-2","AATATACATGTCATTG",3,9.88,6.02,-4.74,1.17,1.5,1.11,0.02,">1 nonsynonymous","V11A S43Y V52H V71S",4
"lib1","SARS-CoV-2","AATATACCAAACTGAG",1,58.17,7.17,-3.59,0.23,1.56,1.12,0.02,">1 nonsynonymous","C61Y N157P",2
"lib1","SARS-CoV-2","AATATACCACTTCCTC",7,52.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44S L60R N107G R127M",4
"lib1","SARS-CoV-2","AATATACCATTCTTTA",2,16.25,6.02,-4.75,0.39,3,1.08,0,">1 nonsynonymous","Y91S G101T",2
"lib1","SARS-CoV-2","AATATACCCTAGAGGC",11,151.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V20E K56V F126K",3
"lib1","SARS-CoV-2","AATATACCTAACCTAC",5,26.35,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","N64M C102W S184G",3
"lib1","SARS-CoV-2","AATATACCTCACTGAT",8,157.05,9.24,-1.53,0.14,1.58,1.14,0.01,">1 nonsynonymous","R27W S36M K56C N110M S164M P197D",6
"lib1","SARS-CoV-2","AATATACGAAAGCAAA",3,17.14,10.77,0,0.09,2.79,1.08,0,">1 nonsynonymous","G116D S129A",2
"lib1","SARS-CoV-2","AATATACGAATACTAT",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M E76Y Q84S",3
"lib1","SARS-CoV-2","AATATACGACTAACTA",1,31.72,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","N13C P82T G101L W106H",4
"lib1","SARS-CoV-2","AATATACGAGGGTTAA",12,83.22,9.75,-1.02,0.1,2.43,1.05,0,">1 nonsynonymous","C6V A33T C61I Q168S",4
"lib1","SARS-CoV-2","AATATACGATTGAAAC",15,309.28,10.38,-0.38,0.03,2.88,1.03,0,">1 nonsynonymous","L5V G83D",2
"lib1","SARS-CoV-2","AATATACGGAATCCCT",3,107.76,9.2,-1.57,0.08,2.62,1.09,0,">1 nonsynonymous","Q176L T201L",2
"lib1","SARS-CoV-2","AATATACGGAGTGTAT",3,14.98,6,-4.76,2,1.5,1.14,0.05,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","AATATACGTAGTTAAT",8,107.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37T K94E P149N F156D",4
"lib1","SARS-CoV-2","AATATACTAATCACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N64* V103L",2
"lib1","SARS-CoV-2","AATATACTACACGTTT",4,35.56,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","E10A D59L G74W G86K",4
"lib1","SARS-CoV-2","AATATACTACAGATTA",3,33.82,8.83,-1.93,0.26,1.5,1,0.03,">1 nonsynonymous","V52A Y121R",2
"lib1","SARS-CoV-2","AATATACTCGGTTCAA",1,2.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","AATATACTTCAGAAGG",3,7.72,10.25,-0.52,0.09,2.98,1.04,0.01,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","AATATAGAAAAAAATG",1,12.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G74V K94S",2
"lib1","SARS-CoV-2","AATATAGAAAATCCCC",4,25.61,8.83,-1.93,0.2,1.5,1.18,0.02,">1 nonsynonymous","A14C A33R T140L",3
"lib1","SARS-CoV-2","AATATAGAAAGTAAGC",1,6.51,6.38,-4.39,0.82,1.5,1.16,0.04,">1 nonsynonymous","D68E I104Y",2
"lib1","SARS-CoV-2","AATATAGACAAAATAA",4,36.64,10.8,0.03,0.1,2.8,1.11,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","AATATAGACAGCTATC",1,43.91,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","S19V D59I A81D S113L G174D",5
"lib1","SARS-CoV-2","AATATAGACTAATGAC",1,7.63,6,-4.76,2,2.43,1.15,0.03,">1 nonsynonymous","C6G F47G L95M",3
"lib1","SARS-CoV-2","AATATAGACTCTTTCG",8,78.38,10.31,-0.46,0.05,2.88,1,0,">1 nonsynonymous","C6D F62I",2
"lib1","SARS-CoV-2","AATATAGACTTTCCAA",8,91.26,9.37,-1.39,0.11,1.82,1.14,0,">1 nonsynonymous","F12H S129K",2
"lib1","SARS-CoV-2","AATATAGATGAACAAA",5,97,10.65,-0.12,0.07,2.91,1.06,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","AATATAGATTATAAAA",1,88.83,10.45,-0.31,0.06,2.88,1.04,0,"1 nonsynonymous","Y35P",1
"lib1","SARS-CoV-2","AATATAGCCCAACAAC",4,69.61,9.59,-1.17,0.07,2.7,1.08,0,">1 nonsynonymous","N58L D97T G174L",3
"lib1","SARS-CoV-2","AATATAGCCGGCTAGT",1,16.87,8.3,-2.47,0.26,1.74,1.18,0.02,">1 nonsynonymous","D112V E186S",2
"lib1","SARS-CoV-2","AATATAGCGCAGAAAT",12,74.86,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S36V C49Q S129Y",3
"lib1","SARS-CoV-2","AATATAGCGCGGCGTA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","L57* L162S K198A",3
"lib1","SARS-CoV-2","AATATAGCTGATAAGT",6,70.97,10.62,-0.14,0.07,2.92,1.05,0,">1 nonsynonymous","T55G N110L T140R",3
"lib1","SARS-CoV-2","AATATAGCTTTTCGCT",3,12.49,6.35,-4.41,0.8,1.5,1.15,0.04,">1 nonsynonymous","R27T G101C E154R T201Y",4
"lib1","SARS-CoV-2","AATATATAAAAAATAT",3,35.55,10.82,0.06,0.07,2.8,1.17,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","AATATATAAAGGGCGA",1,22.31,7.19,-3.58,0.34,1.5,1.15,0.03,">1 nonsynonymous","G9P R25E C61E",3
"lib1","SARS-CoV-2","AATATATAAATGCTAA",1,40.39,9.14,-1.62,0.17,1.85,1.09,0.02,">1 nonsynonymous","S69G Q144N",2
"lib1","SARS-CoV-2","AATATATAACATACAT",1,43.01,10.64,-0.12,0.06,2.96,1.02,0,">1 nonsynonymous","Y123L P197S",2
"lib1","SARS-CoV-2","AATATATAAGTTCGGC",13,70.34,6.1,-4.66,0.66,1.5,1.2,0.01,">1 nonsynonymous","T15G N64I G86S L122G",4
"lib1","SARS-CoV-2","AATATATAATCCTATG",3,70.16,10.7,-0.06,0.05,2.86,1.12,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","AATATATAATGTAACG",5,38.58,6,-4.76,0.83,1.5,1.15,0.01,">1 nonsynonymous","F47V V77M C150S",3
"lib1","SARS-CoV-2","AATATATACAGCCATA",1,33.74,10.21,-0.55,0.09,2.83,1,0,">1 nonsynonymous","Q84L S164Y",2
"lib1","SARS-CoV-2","AATATATACCAGGGAT",6,1.71,NA,NA,NA,NA,NA,NA,"stop","G51N N64K V173Q K198*",4
"lib1","SARS-CoV-2","AATATATAGAACCCCT",6,75.96,8.35,-2.42,0.12,1.79,1.08,0,">1 nonsynonymous","N4S D112Y",2
"lib1","SARS-CoV-2","AATATATAGCTATAGT",10,95.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N107H Y123I",2
"lib1","SARS-CoV-2","AATATATAGGTTGGAC",15,62.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44G G101D G117A F156W",4
"lib1","SARS-CoV-2","AATATATATAAAAACA",2,21.92,9.59,-1.17,0.12,1.99,1.1,0.01,">1 nonsynonymous","K56R T63L Q84Y K114N",4
"lib1","SARS-CoV-2","AATATATATAGAGCAT",4,75,9.69,-1.07,0.11,1.8,1.12,0.01,">1 nonsynonymous","F44R L57R",2
"lib1","SARS-CoV-2","AATATATATATTTTGA",10,207.57,10.79,0.03,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATATATGTGAGAT",3,62.06,8.13,-2.63,0.15,2.75,1.03,0.01,">1 nonsynonymous","Q144C C158W",2
"lib1","SARS-CoV-2","AATATATATTTGGAGG",1,45.6,10.03,-0.74,0.08,2.56,1.13,0,">1 nonsynonymous","K128I I138Y",2
"lib1","SARS-CoV-2","AATATATCATTTATAA",5,27.18,6.08,-4.68,1.06,1.5,1.3,0.03,">1 nonsynonymous","G51V D90L D98R",3
"lib1","SARS-CoV-2","AATATATCCCCCTATA",2,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110D P149L",2
"lib1","SARS-CoV-2","AATATATCTAAAAGAA",2,13.76,9.08,-1.68,0.28,1.53,1.09,0.03,">1 nonsynonymous","A14S F99W N120V G152L F156L",5
"lib1","SARS-CoV-2","AATATATCTCAAAGGG",1,7.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G9M S19K K87S N107Y S139G T170S Y175K",7
"lib1","SARS-CoV-2","AATATATGAGACAACA",2,27.03,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","T46M I80F A89C",3
"lib1","SARS-CoV-2","AATATATGCAATCCAC",9,3.56,NA,NA,NA,NA,NA,NA,"stop","C31K Y91V Y119* V181W",4
"lib1","SARS-CoV-2","AATATATGCGAGAGCA",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W I72F K128R",3
"lib1","SARS-CoV-2","AATATATGTACTACCC",8,81.92,10.73,-0.03,0.05,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATATGTATATTCT",2,30.59,10.43,-0.34,0.08,2.75,1.08,0,">1 nonsynonymous","V173W Y178T",2
"lib1","SARS-CoV-2","AATATATTAAAATTCT",5,20.55,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","L5Q S45I N130V V181D",4
"lib1","SARS-CoV-2","AATATATTACAGATTA",5,41.72,6,-4.76,1.46,1.5,1.09,0,">1 nonsynonymous","S53V F99P L125N E141F",4
"lib1","SARS-CoV-2","AATATATTACTATCTG",3,3.89,NA,NA,NA,NA,NA,NA,"stop","D98K R127*",2
"lib1","SARS-CoV-2","AATATATTATAAAAGC",4,2.62,NA,NA,NA,NA,NA,NA,"stop","L5M T15N A67T D68V K114*",5
"lib1","SARS-CoV-2","AATATATTATTCGCTC",5,52.07,10.78,0.01,0.06,2.98,1.01,0,">1 nonsynonymous","Y35L T148E",2
"lib1","SARS-CoV-2","AATATATTTAATATCA",12,146.76,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L60V A67V P133K N171W Q176C",5
"lib1","SARS-CoV-2","AATATATTTACCACAA",3,2.63,NA,NA,NA,NA,NA,NA,"stop","R127N Y143*",2
"lib1","SARS-CoV-2","AATATCAAAAGTAAAA",5,63.43,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N4T N171K Q176R",3
"lib1","SARS-CoV-2","AATATCAAACATTTAC",2,37.74,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F8K F167M",2
"lib1","SARS-CoV-2","AATATCAAACGGGTGC",1,0.44,NA,NA,NA,NA,NA,NA,"stop","A18F P54F D59* L95Y Q168R",5
"lib1","SARS-CoV-2","AATATCAAATCAACGA",11,219.19,9.33,-1.43,0.05,2.88,1.07,0,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","AATATCAACCTATCAA",6,119.24,9.06,-1.71,0.09,2.31,1.09,0,">1 nonsynonymous","T3K Y121S G155S",3
"lib1","SARS-CoV-2","AATATCAACTAATACA",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W T85D S139Y P161F",4
"lib1","SARS-CoV-2","AATATCAAGAAAAAAA",1,24.88,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I88R T148G",2
"lib1","SARS-CoV-2","AATATCAATCAGCACT",4,77.66,10.48,-0.29,0.05,2.91,1.04,0,">1 nonsynonymous","C61A Y91L",2
"lib1","SARS-CoV-2","AATATCAATCATCGTT",8,65.49,8.54,-2.23,0.12,2.9,1,0.01,">1 nonsynonymous","G116L F126S",2
"lib1","SARS-CoV-2","AATATCAATTAACGAT",3,86.91,10.53,-0.24,0.05,2.89,1.07,0,"1 nonsynonymous","V182I",1
"lib1","SARS-CoV-2","AATATCACAAAATATA",3,26.25,9.9,-0.87,0.12,1.92,1.08,0,">1 nonsynonymous","G9P V52S",2
"lib1","SARS-CoV-2","AATATCACTAAGTTCT",7,2.83,NA,NA,NA,NA,NA,NA,"stop","C6I D90S L95G S113*",4
"lib1","SARS-CoV-2","AATATCACTTAGTATC",7,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A Y93R W106V Y121L R136F Y143K P169V L183S",8
"lib1","SARS-CoV-2","AATATCAGAATTTAAC",2,539.12,10.6,-0.17,0.03,2.92,1.02,0,">1 nonsynonymous","Y119G P149S",2
"lib1","SARS-CoV-2","AATATCAGCCGCAACA",4,71.46,10.77,0.01,0.08,2.92,1.07,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","AATATCAGCTTACGAG",3,32.66,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","P54Q G86V",2
"lib1","SARS-CoV-2","AATATCAGTCTCGACA",4,124.5,10.24,-0.53,0.05,2.93,1.01,0,">1 nonsynonymous","S45R K87V",2
"lib1","SARS-CoV-2","AATATCAGTTTCGACC",1,83.12,9.65,-1.11,0.09,2.55,1.08,0,">1 nonsynonymous","L60I Q176H",2
"lib1","SARS-CoV-2","AATATCATAATCTATT",12,99.59,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4K C61Y T85S A105S Y143V G174V",6
"lib1","SARS-CoV-2","AATATCATTAAAGATG",12,93.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R K87L A105M F160R P197T",5
"lib1","SARS-CoV-2","AATATCATTGTACTTT",2,33.94,10.1,-0.66,0.07,2.93,1,0,">1 nonsynonymous","C61P K87M G152S",3
"lib1","SARS-CoV-2","AATATCCAAATGCAGG",12,122.67,10.71,-0.05,0.05,2.91,1.04,0,">1 nonsynonymous","G9S F134S",2
"lib1","SARS-CoV-2","AATATCCAACGTACAC",5,27.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E F99M V103A N120T K128Q",5
"lib1","SARS-CoV-2","AATATCCAAGAGAATT",7,3.3,NA,NA,NA,NA,NA,NA,"stop","P54R P82* T170R",3
"lib1","SARS-CoV-2","AATATCCAAGCTCCGT",3,58.69,10.21,-0.55,0.05,2.81,1.03,0,">1 nonsynonymous","P133A P149W A190S",3
"lib1","SARS-CoV-2","AATATCCAATGTGTCA",6,84.92,10.47,-0.3,0.05,2.94,1.01,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","AATATCCACCTTCCAT",15,19.59,8.71,-2.05,0.25,1.5,1.19,0.02,">1 nonsynonymous","T15Y W106A",2
"lib1","SARS-CoV-2","AATATCCACGCACGCA",2,33.01,6.36,-4.4,0.23,2.02,1.17,0,">1 nonsynonymous","S36K C158M",2
"lib1","SARS-CoV-2","AATATCCATACAAGAT",3,208.19,8.16,-2.6,0.13,2.36,1.11,0.01,">1 nonsynonymous","Y119S Q176S S200V",3
"lib1","SARS-CoV-2","AATATCCATATCGCAA",4,98.5,9.29,-1.48,0.19,1.69,1.15,0.02,"1 nonsynonymous","P82R",1
"lib1","SARS-CoV-2","AATATCCCGCTCCAAC",3,19.8,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P7Y D98M G172C",3
"lib1","SARS-CoV-2","AATATCCCTCGGGTAT",5,148.47,10.39,-0.37,0.03,2.83,1.04,0,">1 nonsynonymous","T3Y E135G Q168R",3
"lib1","SARS-CoV-2","AATATCCCTTGAAACA",3,89.57,6,-4.76,1.78,1.5,1.15,0.01,">1 nonsynonymous","F17W P54L P177L",3
"lib1","SARS-CoV-2","AATATCCGAAAACTAA",5,19.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103D P161D",2
"lib1","SARS-CoV-2","AATATCCGAGGTTACG",3,25.95,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F99V Y121T G174W",3
"lib1","SARS-CoV-2","AATATCCGATGAGGGG",1,46.61,10.1,-0.67,0.04,2.91,1.04,0,">1 nonsynonymous","T63S Y119R S129N",3
"lib1","SARS-CoV-2","AATATCCGTCACCCGC",2,13.75,9.83,-0.93,0.26,2.68,1,0.02,">1 nonsynonymous","S41W S139L",2
"lib1","SARS-CoV-2","AATATCCTAGGCTAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L38N C49N D75T G86L D112* Q144I N151D N157I",8
"lib1","SARS-CoV-2","AATATCCTCCACTCGT",1,22.4,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","Q84Y D90W A105S L162M",4
"lib1","SARS-CoV-2","AATATCCTCGCGACTG",7,130.07,8.63,-2.13,0.09,2.9,1.1,0,">1 nonsynonymous","T63R F126A",2
"lib1","SARS-CoV-2","AATATCGAACGATAAA",2,64.48,8.61,-2.16,0.13,2.17,1.19,0.01,">1 nonsynonymous","N1L D90Q Y123W G166R",4
"lib1","SARS-CoV-2","AATATCGAAGGATTGG",4,30.96,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","P96L G146P",2
"lib1","SARS-CoV-2","AATATCGAATTAACGG",5,0.69,NA,NA,NA,NA,NA,NA,"stop","S69* G83I G101* N118K",4
"lib1","SARS-CoV-2","AATATCGACTTTTCAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATATCGAGAAAGAGG",4,13.35,8.2,-2.56,0.34,1.5,1.27,0.05,">1 nonsynonymous","I2E D68S S200N",3
"lib1","SARS-CoV-2","AATATCGCAGTGACAC",2,22.51,10.57,-0.2,0.08,2.83,1.07,0,">1 nonsynonymous","K48L N58G",2
"lib1","SARS-CoV-2","AATATCGCTTAATAAA",2,19.02,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","E10S W106V N157R V173R Y178L",5
"lib1","SARS-CoV-2","AATATCGTATCTGATG",1,11.32,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","G51F Y119S S129I I138R P161K",5
"lib1","SARS-CoV-2","AATATCGTCATACTAT",5,83.38,9.21,-1.55,0.08,2.84,1.16,0,">1 nonsynonymous","F126Y E154G",2
"lib1","SARS-CoV-2","AATATCGTCTCAGATA",1,26.55,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N107E G116L F126S Q144K",4
"lib1","SARS-CoV-2","AATATCGTTCAGGGGC",4,29.65,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C61G I104M P161L",3
"lib1","SARS-CoV-2","AATATCGTTGAACAGG",2,11.04,7,-3.77,0.45,1.5,1.1,0.02,">1 nonsynonymous","W23T I80V",2
"lib1","SARS-CoV-2","AATATCTACAGTACAG",8,2.94,NA,NA,NA,NA,NA,NA,"stop","V11C S19* Y66R T85V Q176L",5
"lib1","SARS-CoV-2","AATATCTAGACCTAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","N4C Q163*",2
"lib1","SARS-CoV-2","AATATCTAGTATCTTA",3,9.78,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","W23Y N92Y",2
"lib1","SARS-CoV-2","AATATCTCTCTTTACC",6,85.44,10.71,-0.05,0.05,2.86,1.07,0,"1 nonsynonymous","S129C",1
"lib1","SARS-CoV-2","AATATCTGACATAACT",6,87.54,8.6,-2.16,0.19,1.5,1.15,0.01,">1 nonsynonymous","W106A G152C",2
"lib1","SARS-CoV-2","AATATCTGAGAGGTGA",7,13.56,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y93K P197L",2
"lib1","SARS-CoV-2","AATATCTGCAATTATA",6,49.25,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9I L38Q P82E K128R",4
"lib1","SARS-CoV-2","AATATCTTCAGTTAAA",6,27.75,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S43Y D59L I80W",3
"lib1","SARS-CoV-2","AATATCTTCGCCTGAA",6,1.43,NA,NA,NA,NA,NA,NA,"stop","R16A V180*",2
"lib1","SARS-CoV-2","AATATCTTGAGCTCAT",1,9.6,8.54,-2.22,0.43,1.5,1.02,0.01,">1 nonsynonymous","S41M Y91S T170F",3
"lib1","SARS-CoV-2","AATATCTTTAAAATTA",3,41.3,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","F12M T55I A89R T201R",4
"lib1","SARS-CoV-2","AATATCTTTATATGAA",2,21.66,10.03,-0.74,0.24,1.93,1.1,0.02,">1 nonsynonymous","T100Y A105Q S200T",3
"lib1","SARS-CoV-2","AATATGAAAATAGTAA",3,10.49,10.17,-0.59,0.1,2.97,1.02,0.01,">1 nonsynonymous","N1K D75E P149I",3
"lib1","SARS-CoV-2","AATATGAAATTCTTAA",2,33.82,10.68,-0.09,0.05,2.93,1.03,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","AATATGAACAGAAGAC",1,9.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90F D97P V103T P149S",4
"lib1","SARS-CoV-2","AATATGAACCATGAAC",3,27.87,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","P7L Y93T K114R E135P C158T",5
"lib1","SARS-CoV-2","AATATGAACGGAGCAT",4,1.82,NA,NA,NA,NA,NA,NA,"stop","Y66F T148D L162S Q176F E186*",5
"lib1","SARS-CoV-2","AATATGAAGATAACCC",7,76.9,9.14,-1.63,0.18,1.56,1.11,0.02,">1 nonsynonymous","C6V T85M L122K A145P T201E",5
"lib1","SARS-CoV-2","AATATGAAGTAGCAGT",1,7.08,6,-4.76,2,1.5,1.06,0.03,"1 nonsynonymous","L95Y",1
"lib1","SARS-CoV-2","AATATGAATTCGAGCC",2,34.22,9.51,-1.25,0.1,2.72,1.14,0,"1 nonsynonymous","Y121P",1
"lib1","SARS-CoV-2","AATATGACATTCATAA",1,17.41,10.08,-0.68,0.09,2.28,1.02,0,"1 nonsynonymous","F17A",1
"lib1","SARS-CoV-2","AATATGACCGATCTAA",4,36.88,6.19,-4.58,0.89,1.5,1.22,0.03,">1 nonsynonymous","S19N G86S Y119C",3
"lib1","SARS-CoV-2","AATATGACGAATAAAT",10,2.05,NA,NA,NA,NA,NA,NA,"stop","E10S I28* L125M Q176V",4
"lib1","SARS-CoV-2","AATATGACGCATTACT",1,13.08,6,-4.76,1.78,1.5,1.27,0.07,">1 nonsynonymous","P7L V71G I88Q D98E N157T",5
"lib1","SARS-CoV-2","AATATGACTAAGGGAT",6,99.07,9.68,-1.09,0.11,2.04,1.07,0,">1 nonsynonymous","A14V L57T T201L",3
"lib1","SARS-CoV-2","AATATGACTATGACAA",2,28.77,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V52C Y93C G152L",3
"lib1","SARS-CoV-2","AATATGAGAAATTAAA",3,98.38,9.63,-1.14,0.1,1.84,1.13,0,">1 nonsynonymous","N4D T46K V153S V173S",4
"lib1","SARS-CoV-2","AATATGAGGGGATTGA",6,122.66,10.8,0.04,0.07,2.88,1.06,0,">1 nonsynonymous","T55N S129K",2
"lib1","SARS-CoV-2","AATATGAGTATTTGGT",3,66.67,10.81,0.05,0.09,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATGATAAATAACC",1,33.39,8.74,-2.03,0.08,2.68,1.08,0,">1 nonsynonymous","K87S Y121V I138L T201S",4
"lib1","SARS-CoV-2","AATATGATAGGTTTCA",3,22.48,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A105T E141A V180D",3
"lib1","SARS-CoV-2","AATATGATCATACACT",1,19.54,8.83,-1.93,0.12,2.82,1.11,0.01,"1 nonsynonymous","S113V",1
"lib1","SARS-CoV-2","AATATGATGACTAAAA",9,136.05,10.48,-0.29,0.06,2.87,1.04,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","AATATGATGTGACATG",3,5.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6G",1
"lib1","SARS-CoV-2","AATATGCAAAATGTCT",1,18.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6I V37K Y66L N92V S129T P149A",6
"lib1","SARS-CoV-2","AATATGCAAGAACATT",6,74.45,7.42,-3.35,0.16,1.7,1.14,0.01,">1 nonsynonymous","Y123T N130C P149L F156D",4
"lib1","SARS-CoV-2","AATATGCAGAGCATTC",2,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q D90P D98S",3
"lib1","SARS-CoV-2","AATATGCATCACCGCC",1,1,NA,NA,NA,NA,NA,NA,"stop","L5T R25A F126*",3
"lib1","SARS-CoV-2","AATATGCATTTGCATG",2,0.18,NA,NA,NA,NA,NA,NA,"stop","S129F R136I P149R F167K V173*",5
"lib1","SARS-CoV-2","AATATGCCAAATCTCT",1,11.06,10.73,-0.03,0.06,3,1.03,0,">1 nonsynonymous","S29N K132T",2
"lib1","SARS-CoV-2","AATATGCCAGACCATG",1,11.77,10.47,-0.3,0.08,2.79,1.18,0,">1 nonsynonymous","V37A C61Y",2
"lib1","SARS-CoV-2","AATATGCCGAGTAAAA",6,85.34,9.11,-1.65,0.3,1.5,1,0.04,">1 nonsynonymous","K56C I80M S184L",3
"lib1","SARS-CoV-2","AATATGCCGCATACTT",16,5.29,NA,NA,NA,NA,NA,NA,"stop","G146* Y159* F167N",3
"lib1","SARS-CoV-2","AATATGCCTGCCAAAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","R73* L95Y G101S V180F",4
"lib1","SARS-CoV-2","AATATGCGGTTATTTA",17,57.94,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S45N K87I R124Y",3
"lib1","SARS-CoV-2","AATATGCTAAAGGATT",1,20.42,9.8,-0.96,0.17,2.04,1.01,0.01,"1 nonsynonymous","F12C",1
"lib1","SARS-CoV-2","AATATGCTACTCGTGG",2,29.38,6,-4.76,1.79,1.5,1.24,0.05,">1 nonsynonymous","Y50D G74L D90R Q163L V173S",5
"lib1","SARS-CoV-2","AATATGCTATCTATCA",1,17.72,10.7,-0.07,0.06,2.98,1,0,">1 nonsynonymous","N120A K128L",2
"lib1","SARS-CoV-2","AATATGCTGGATCCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37N E135L E141*",3
"lib1","SARS-CoV-2","AATATGCTTCATCTCC",2,16.67,6.91,-3.85,0.48,1.63,1.06,0.04,">1 nonsynonymous","L131V I142T P161Y",3
"lib1","SARS-CoV-2","AATATGGAATCTACCT",6,11.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L125S F156N L183K",3
"lib1","SARS-CoV-2","AATATGGACGGTCACT",10,3.6,NA,NA,NA,NA,NA,NA,"stop","F44* G51V L122R",3
"lib1","SARS-CoV-2","AATATGGAGTCTATGC",1,40.23,9.76,-1,0.08,2.73,1.08,0,">1 nonsynonymous","K87C I104T",2
"lib1","SARS-CoV-2","AATATGGCCCCAAGAA",7,88.21,10.42,-0.34,0.07,2.91,1.03,0,">1 nonsynonymous","Y39C T55K A190I",3
"lib1","SARS-CoV-2","AATATGGCCTAGAGTA",1,47.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N120W P177K",2
"lib1","SARS-CoV-2","AATATGGCGTACTAAA",5,45.13,7.53,-3.24,0.25,1.5,1.2,0.02,">1 nonsynonymous","N4C G51S I104T",3
"lib1","SARS-CoV-2","AATATGGGAAACGAGA",14,130.86,7.75,-3.02,0.19,1.5,1.14,0.01,">1 nonsynonymous","F47N G166I",2
"lib1","SARS-CoV-2","AATATGGGAGCCATAG",2,21.42,8.23,-2.53,0.22,1.82,1.12,0.03,">1 nonsynonymous","A33Q K114D Q176L",3
"lib1","SARS-CoV-2","AATATGGGAGCTTAAC",2,25.54,9.54,-1.22,0.25,1.68,1.13,0.02,">1 nonsynonymous","N40E L57C G152S",3
"lib1","SARS-CoV-2","AATATGGGGACTGTAC",9,52.06,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W106C F126M G155I P161K",4
"lib1","SARS-CoV-2","AATATGGGGCAATACA",10,174.65,6.3,-4.46,0.65,1.5,1.26,0.03,">1 nonsynonymous","N4I V11K G83N Q144L",4
"lib1","SARS-CoV-2","AATATGGTAACGTTAG",16,226.73,10.53,-0.23,0.04,2.9,1.03,0,">1 nonsynonymous","A42M A89P",2
"lib1","SARS-CoV-2","AATATGGTAGTAAAAT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","R27* D75L L131* G166P",4
"lib1","SARS-CoV-2","AATATGGTCGTCGGCA",7,107.75,10.31,-0.45,0.04,2.83,1.01,0,">1 nonsynonymous","V37K K48I V52H",3
"lib1","SARS-CoV-2","AATATGGTGCCGCATG",1,4.99,NA,NA,NA,NA,NA,NA,"stop","N24* F47L N120K I138L A192K",5
"lib1","SARS-CoV-2","AATATGTAAAAAATTA",2,33.59,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","I2A L95H Y119I S129N N151D",5
"lib1","SARS-CoV-2","AATATGTATCAGTAAA",5,38.07,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F70K I80W I138C K198Q",4
"lib1","SARS-CoV-2","AATATGTATGTTTGAA",1,8.43,10.24,-0.52,0.07,2.98,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","AATATGTGAAGAATAA",20,104.25,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6L L38K C102S N171L",4
"lib1","SARS-CoV-2","AATATGTGGAACACAA",4,64.72,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","AATATGTGTGTGGCCG",7,153.35,10.67,-0.09,0.05,2.88,1.07,0,">1 nonsynonymous","S147I T201R",2
"lib1","SARS-CoV-2","AATATGTTCGTTACAT",9,157.29,8.88,-1.89,0.1,2.76,1.08,0,">1 nonsynonymous","Y119D S139L",2
"lib1","SARS-CoV-2","AATATGTTCTTCTCTG",1,27.13,10.85,0.09,0.13,2.89,1.05,0.01,"1 nonsynonymous","F160T",1
"lib1","SARS-CoV-2","AATATGTTTTAACCCA",4,5.58,NA,NA,NA,NA,NA,NA,"stop","T3A N13V F47T D68* P149M T170S Y175F",7
"lib1","SARS-CoV-2","AATATTAAAGACGATA",11,96.21,10.37,-0.39,0.06,2.92,1.04,0,">1 nonsynonymous","Y121L P149M",2
"lib1","SARS-CoV-2","AATATTAAAGATAGAG",4,1,NA,NA,NA,NA,NA,NA,"stop","A14C T46V Y119G R136S E154L V173*",6
"lib1","SARS-CoV-2","AATATTAAATATTGCA",7,57.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A18I S41V C61R K94L P161L Y165W",6
"lib1","SARS-CoV-2","AATATTAAATCGATTA",5,76.95,8.7,-2.07,0.09,2.82,1.11,0,">1 nonsynonymous","K48I G117F",2
"lib1","SARS-CoV-2","AATATTAACTATTCAC",2,15.54,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","E10S R27W Y91P T148F",4
"lib1","SARS-CoV-2","AATATTAACTTTTGTT",1,1.13,NA,NA,NA,NA,NA,NA,"stop","C61Y Y91* Y121W Q176R T201G",5
"lib1","SARS-CoV-2","AATATTAAGACTAAAT",5,60.76,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D68K L131S Y178F",3
"lib1","SARS-CoV-2","AATATTAAGCATGTCG",3,82.32,10.11,-0.65,0.07,2.77,1,0,">1 nonsynonymous","C6N G83F",2
"lib1","SARS-CoV-2","AATATTAATAACCGCA",1,21.46,10.72,-0.04,0.15,2.8,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATATTAATACGATGC",10,52.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12N Y39V F44L G86C W106R",5
"lib1","SARS-CoV-2","AATATTAATCCAGTAA",2,31.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y21L C61N V77Q L125D S139T A145G P197I",7
"lib1","SARS-CoV-2","AATATTAATCTGCTTG",4,43.94,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","N4G G86T V115C Y121G Q144F",5
"lib1","SARS-CoV-2","AATATTAATGTGCACA",2,3.68,NA,NA,NA,NA,NA,NA,"stop","N1V S36* G83K",3
"lib1","SARS-CoV-2","AATATTACACGTACAT",1,25.57,10.45,-0.31,0.05,2.79,1.03,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","AATATTACATAAAGGC",11,52.96,7.31,-3.45,0.34,1.5,1.21,0.03,">1 nonsynonymous","V37G W106D",2
"lib1","SARS-CoV-2","AATATTACCTCCGCAA",8,81.22,10.79,0.02,0.07,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AATATTACGCAGATAA",12,32.76,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N30G G155R P169Y L183S",4
"lib1","SARS-CoV-2","AATATTACGTCCGCAG",6,14.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9T V20M F47I V103G",4
"lib1","SARS-CoV-2","AATATTACTACCTTAG",4,10.8,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F17I K94S N157S",3
"lib1","SARS-CoV-2","AATATTACTTTTAAGG",3,20.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7M C61S R124I Q144R",4
"lib1","SARS-CoV-2","AATATTAGACAAACCT",5,25.63,10.9,0.14,0.09,2.83,1.07,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","AATATTAGAGCGCTGA",4,9.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99R G117D Y143V G155C",4
"lib1","SARS-CoV-2","AATATTAGCCTCCCGT",5,64.16,10.73,-0.03,0.06,2.98,1,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","AATATTATAACATTCA",4,59.84,10.54,-0.22,0.06,2.96,1.05,0,">1 nonsynonymous","R16M T63D",2
"lib1","SARS-CoV-2","AATATTATAATACTCT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M F99S A105S F160L",4
"lib1","SARS-CoV-2","AATATTATCTGTCCCA",3,105.59,10.78,0.02,0.05,2.92,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AATATTATGCATTTGC",15,371.96,10.45,-0.32,0.04,2.86,1.03,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","AATATTATTATCGGTT",7,93.25,9.43,-1.33,0.18,1.61,1.18,0.01,">1 nonsynonymous","V65R K94A N120K S129D",4
"lib1","SARS-CoV-2","AATATTCCATCAACAA",1,29.72,10.68,-0.08,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATTCCATTGTGGA",8,94.16,6,-4.76,0.96,1.5,1.18,0.01,">1 nonsynonymous","G9E L131D H189R",3
"lib1","SARS-CoV-2","AATATTCCCAATTAAG",3,46.58,10.79,0.03,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATTCCTACATGCA",7,118.39,10.29,-0.48,0.04,2.88,1.05,0,"1 nonsynonymous","Y35C",1
"lib1","SARS-CoV-2","AATATTCCTCATTAAC",10,160.49,10.77,0.01,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATTCCTTGCCATA",15,247.58,10.09,-0.68,0.04,2.91,1.02,0,">1 nonsynonymous","K48D V52I N64T N151L G174K",5
"lib1","SARS-CoV-2","AATATTCGAACAAGCT",1,8.25,6.09,-4.68,0.81,1.5,1.12,0.03,">1 nonsynonymous","S19V G86C G101V",3
"lib1","SARS-CoV-2","AATATTCGAGCTAAAA",7,145.97,10.24,-0.52,0.04,2.91,1.02,0,">1 nonsynonymous","C6P Y35L R78Y T100V",4
"lib1","SARS-CoV-2","AATATTCGCATTAAAC",1,10.53,10.83,0.07,0.07,2.96,1.01,0,">1 nonsynonymous","I2M P82N G152N",3
"lib1","SARS-CoV-2","AATATTCGTTGATTTG",1,9.24,10.66,-0.1,0.08,3,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AATATTCTAAAAACAC",2,11.05,9.73,-1.03,0.21,1.98,1.05,0.02,">1 nonsynonymous","F17P K48S",2
"lib1","SARS-CoV-2","AATATTCTAACAGAAC",3,0.49,NA,NA,NA,NA,NA,NA,"stop","L5Q A14M V71M Y93L Y121*",5
"lib1","SARS-CoV-2","AATATTCTAATTAATC",3,8.71,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N13C L60D V103R G116T",4
"lib1","SARS-CoV-2","AATATTCTTAAATAGC",5,51.28,10.03,-0.73,0.08,2.77,1.04,0,">1 nonsynonymous","S41R K87F I138T Q144T",4
"lib1","SARS-CoV-2","AATATTGACGACACCA",8,56.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12D D75A D98E S113L S164I T170E",6
"lib1","SARS-CoV-2","AATATTGCATATTTAT",4,5.73,9.1,-1.66,0.2,1.68,1.17,0.02,">1 nonsynonymous","L5F A33N N107S T148V",4
"lib1","SARS-CoV-2","AATATTGCGAGTGAGA",2,40.58,8.72,-2.05,0.18,1.75,1.19,0.01,">1 nonsynonymous","V32G Y91S",2
"lib1","SARS-CoV-2","AATATTGGAATGGTAA",5,104.5,8.97,-1.8,0.12,2.09,1.15,0.01,">1 nonsynonymous","L38M K87G S129L",3
"lib1","SARS-CoV-2","AATATTGGACTACCAA",5,57.59,10.56,-0.21,0.05,2.88,1.05,0,">1 nonsynonymous","I2W N58S",2
"lib1","SARS-CoV-2","AATATTGGACTTCAAT",3,16.89,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14G A89R I104L R179G F185H",5
"lib1","SARS-CoV-2","AATATTGTCATAAAAA",7,3.56,NA,NA,NA,NA,NA,NA,"stop","S45P T100*",2
"lib1","SARS-CoV-2","AATATTGTCTAAGTCG",8,69.62,10.02,-0.74,0.1,2.11,1.05,0,">1 nonsynonymous","V77L P133R",2
"lib1","SARS-CoV-2","AATATTGTTACAGTTA",6,110.56,10.77,0,0.04,2.93,1.04,0,">1 nonsynonymous","L5S L95V N130R",3
"lib1","SARS-CoV-2","AATATTGTTCCTCGTA",1,34.2,9.98,-0.78,0.11,2.51,1.04,0.01,">1 nonsynonymous","R27V S43N W106R",3
"lib1","SARS-CoV-2","AATATTGTTGAAATAT",2,2.58,NA,NA,NA,NA,NA,NA,"stop","P7L S41L S45A Q176*",4
"lib1","SARS-CoV-2","AATATTGTTTATGACC",1,36.34,10.66,-0.1,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATATTTAAGACAATA",2,11.06,9.13,-1.63,0.24,1.73,1.08,0.02,">1 nonsynonymous","L38M N107H",2
"lib1","SARS-CoV-2","AATATTTACTACGAAA",4,42.89,6.97,-3.8,0.29,1.5,1.09,0.01,">1 nonsynonymous","D34E N107D S147L",3
"lib1","SARS-CoV-2","AATATTTAGCCCATGT",6,31.91,6.56,-4.21,0.35,1.5,1.19,0.01,">1 nonsynonymous","T3Q R25P",2
"lib1","SARS-CoV-2","AATATTTCACATAGAT",4,42.6,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","L95W R127M E135T G146V Y159T",5
"lib1","SARS-CoV-2","AATATTTCGTAACTAA",3,1.44,NA,NA,NA,NA,NA,NA,"stop","D59G D68L G86R V103*",4
"lib1","SARS-CoV-2","AATATTTGAACTTCGT",3,40.22,10.57,-0.19,0.08,2.89,1.08,0,">1 nonsynonymous","V37S D97V P149M",3
"lib1","SARS-CoV-2","AATATTTGAGAGTTAC",11,13.96,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N13F L60F S69T D90H T100A",5
"lib1","SARS-CoV-2","AATATTTGCTCCAACA",4,1.74,NA,NA,NA,NA,NA,NA,"stop","G166Y N171*",2
"lib1","SARS-CoV-2","AATATTTGGCAATTTT",4,21.55,10.21,-0.55,0.1,2.36,1,0,">1 nonsynonymous","N13I N130P A190N",3
"lib1","SARS-CoV-2","AATATTTTAAAACAAA",1,18.8,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A105L Y121F P161V K199P",4
"lib1","SARS-CoV-2","AATATTTTAGTCTAAA",3,36.7,10.03,-0.74,0.1,2.68,1.06,0.01,"1 nonsynonymous","C31I",1
"lib1","SARS-CoV-2","AATATTTTATAAAAAA",1,7.86,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","S45P G86F L122Y",3
"lib1","SARS-CoV-2","AATATTTTGAACCCTA",4,6.3,9.95,-0.81,0.14,1.89,1.18,0.01,">1 nonsynonymous","F8S F62L I104F",3
"lib1","SARS-CoV-2","AATATTTTTAACGCGG",13,3.39,NA,NA,NA,NA,NA,NA,"stop","R73C K94M P149* T201*",4
"lib1","SARS-CoV-2","AATATTTTTATTACTG",2,0.38,NA,NA,NA,NA,NA,NA,"stop","Y39H G83M S113* Y119F N157E",5
"lib1","SARS-CoV-2","AATCAAAAAAACCAAA",3,31.46,10.38,-0.38,0.05,2.95,1,0,">1 nonsynonymous","T15P Y35G",2
"lib1","SARS-CoV-2","AATCAAAAAAAGATCG",3,8.76,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T3M K56Y D112W T170V Q176E",5
"lib1","SARS-CoV-2","AATCAAAAACCGCTAG",2,6.5,10.95,0.19,0.12,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAAAACCTCGTAT",8,98.7,9.08,-1.68,0.17,1.7,1.19,0.01,">1 nonsynonymous","I2D A42W Y121R",3
"lib1","SARS-CoV-2","AATCAAAACCTTATTC",5,71.84,10.63,-0.13,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAAAACTTTGTTC",1,1.63,NA,NA,NA,NA,NA,NA,"stop","V32L C49T P96* E141*",4
"lib1","SARS-CoV-2","AATCAAAAGCGGTCAA",5,75.31,8.7,-2.06,0.09,2.7,1.15,0,">1 nonsynonymous","F44L G166K",2
"lib1","SARS-CoV-2","AATCAAAATAAATCAA",4,18.95,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I88M L162W",2
"lib1","SARS-CoV-2","AATCAAAATCTATTTG",2,114.35,10.12,-0.65,0.05,2.87,1.05,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","AATCAAAATGGTCGAC",3,81.18,10.65,-0.12,0.07,2.91,1.06,0,"1 nonsynonymous","I138C",1
"lib1","SARS-CoV-2","AATCAAAATGTACTAG",4,23.7,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","L95E F156S G166S",3
"lib1","SARS-CoV-2","AATCAAACAAGCGTTT",2,48.39,6,-4.76,2,2.05,1.19,0,">1 nonsynonymous","S45P C61Y N110G P161T V173H",5
"lib1","SARS-CoV-2","AATCAAACAGGATGGC",3,110.09,10.56,-0.21,0.11,2.8,1.01,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","AATCAAACCATGTTCA",9,1.86,NA,NA,NA,NA,NA,NA,"stop","D34A C195*",2
"lib1","SARS-CoV-2","AATCAAACCCACCTAT",2,11.56,6.53,-4.23,1.31,1.5,1.18,0.02,">1 nonsynonymous","E10H L95E G174I",3
"lib1","SARS-CoV-2","AATCAAACCGTGCCAG",7,27.59,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","W106K I142N G174I",3
"lib1","SARS-CoV-2","AATCAAACCTAGAATT",5,56.14,10.73,-0.04,0.07,2.9,1.07,0,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","AATCAAACCTTCCGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L111S K132V I142* C150W",4
"lib1","SARS-CoV-2","AATCAAACGGCAGAAT",1,24.41,10.46,-0.31,0.09,2.91,1.08,0,">1 nonsynonymous","Y35F T55L D90C",3
"lib1","SARS-CoV-2","AATCAAACGGTCCACT",9,35.59,6,-4.76,2,3,1.05,0,">1 nonsynonymous","S41D L122M D137M N151R P177V",5
"lib1","SARS-CoV-2","AATCAAACTCAACAAA",9,117.68,10.35,-0.41,0.05,2.86,1.03,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","AATCAAAGACTAGACA",1,19.34,9.2,-1.56,0.14,1.89,1.04,0.01,">1 nonsynonymous","K56V R127N",2
"lib1","SARS-CoV-2","AATCAAAGATATAAGA",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R G86H Y93S D98T",4
"lib1","SARS-CoV-2","AATCAAAGCATTAGAA",4,0.11,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib1","SARS-CoV-2","AATCAAAGGACGTTGA",3,38.58,6,-4.76,0.98,1.5,1.13,0.01,">1 nonsynonymous","F126V T148Q Y165K",3
"lib1","SARS-CoV-2","AATCAAATAAAGTATA",4,83.83,10.26,-0.5,0.06,2.81,1,0,">1 nonsynonymous","Y123T E141D",2
"lib1","SARS-CoV-2","AATCAAATAAGCTACA",1,2.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATCAAATATATGCGC",3,1.08,NA,NA,NA,NA,NA,NA,"stop","C6R D97N N107*",3
"lib1","SARS-CoV-2","AATCAAATATGTCTAA",1,31.43,10.81,0.05,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAAATCAAATCCG",7,1.2,NA,NA,NA,NA,NA,NA,"stop","R25* K56N N109F",3
"lib1","SARS-CoV-2","AATCAAATCTTTTAAA",4,23.92,10.2,-0.57,0.14,2.46,1,0.01,">1 nonsynonymous","Y35L F99V",2
"lib1","SARS-CoV-2","AATCAACAAATCGGTC",7,19.11,8.87,-1.89,0.27,1.5,1,0.03,">1 nonsynonymous","Y21G S29T T85R",3
"lib1","SARS-CoV-2","AATCAACAATCCACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S V52I L95T R124N G146V F167*",6
"lib1","SARS-CoV-2","AATCAACAATTAATGC",2,33.28,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G83V R127N",2
"lib1","SARS-CoV-2","AATCAACACATACTGA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","P7L F99* Q168S",3
"lib1","SARS-CoV-2","AATCAACATATAACAC",4,1.07,NA,NA,NA,NA,NA,NA,"stop","G117T S147* F156M",3
"lib1","SARS-CoV-2","AATCAACCGTGTAAAC",2,25.34,10.7,-0.07,0.06,2.97,1,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","AATCAACCTGAGCAGA",3,25.41,10.59,-0.17,0.05,2.86,1.03,0,"1 nonsynonymous","D98M",1
"lib1","SARS-CoV-2","AATCAACGAGAATTAC",1,17.47,10.7,-0.06,0.05,3,1,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","AATCAACGTGAATAAG",1,8.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R25G L122G",2
"lib1","SARS-CoV-2","AATCAACTATAGATTG",4,25.71,6,-4.76,1.04,3,1.04,0,">1 nonsynonymous","G9L V103R Q163G S184N",4
"lib1","SARS-CoV-2","AATCAAGAAAAGCTGC",3,11.25,6.8,-3.97,0.45,1.5,1,0.04,">1 nonsynonymous","K94P E141W",2
"lib1","SARS-CoV-2","AATCAAGAAAGTAAGG",4,37.69,9.63,-1.13,0.18,1.86,1.12,0.01,"1 nonsynonymous","I28E",1
"lib1","SARS-CoV-2","AATCAAGAAGTATATA",1,34.19,6,-4.76,2,3,1.16,0,">1 nonsynonymous","K94V C158Q",2
"lib1","SARS-CoV-2","AATCAAGATCAAGCCG",2,17.32,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L5Q A14I N24L L60T D68Q S200Y",6
"lib1","SARS-CoV-2","AATCAAGATGACTAAC",5,48.37,10.31,-0.46,0.08,2.83,1,0,">1 nonsynonymous","T85A N130F R136Q",3
"lib1","SARS-CoV-2","AATCAAGATGGTTCCA",1,21.82,6.01,-4.76,1.09,1.5,1.17,0.02,">1 nonsynonymous","F44Y T148Q V182L",3
"lib1","SARS-CoV-2","AATCAAGCACGCCCGG",1,46.69,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y39S S45I D98N C102G E141R",5
"lib1","SARS-CoV-2","AATCAAGCCCAAGACC",5,34.93,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","A89D S113R E141N",3
"lib1","SARS-CoV-2","AATCAAGCGAAAACGC",11,109.21,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","P82K L122V E141N Y165S",4
"lib1","SARS-CoV-2","AATCAAGCGGTACCAA",11,248.1,10,-0.77,0.04,2.91,1.03,0,">1 nonsynonymous","D98T E154L",2
"lib1","SARS-CoV-2","AATCAAGCGGTCATCA",1,11.66,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","G101V Y143L Q163K",3
"lib1","SARS-CoV-2","AATCAAGCTGGCCTCA",9,81.36,9.59,-1.18,0.09,2.46,1.11,0,">1 nonsynonymous","Y35L K114T K128S S139G N151I V173F",6
"lib1","SARS-CoV-2","AATCAAGGACTAAACC",7,44.28,9.88,-0.89,0.12,2.37,1.07,0,">1 nonsynonymous","N13W L60F",2
"lib1","SARS-CoV-2","AATCAAGTACAGAATG",2,11.84,10.32,-0.44,0.17,2.88,1.04,0.01,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","AATCAAGTATAGCAAT",2,36.92,9.19,-1.57,0.2,1.5,1.1,0.02,"1 nonsynonymous","R25A",1
"lib1","SARS-CoV-2","AATCAAGTATGCTCCG",6,45.88,6,-4.76,1.52,1.5,1.17,0.01,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","AATCAAGTGTGTAAAA",7,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20I Q84R I104M S108P F185R T201M",6
"lib1","SARS-CoV-2","AATCAATAATTGTACA",2,11.05,10.12,-0.64,0.2,2.41,1,0.02,">1 nonsynonymous","L60A A89C D97A",3
"lib1","SARS-CoV-2","AATCAATACATGATAT",6,75.84,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R27E S43E Y50T N151T P169T",5
"lib1","SARS-CoV-2","AATCAATACCATACGA",1,14.41,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","R73S C150R",2
"lib1","SARS-CoV-2","AATCAATAGAAAATTA",5,106.26,9.15,-1.61,0.05,2.86,1.08,0,">1 nonsynonymous","D90L N157G",2
"lib1","SARS-CoV-2","AATCAATATACCCAAT",1,45.24,10.12,-0.64,0.12,2.65,1,0.01,">1 nonsynonymous","R16G Y35S",2
"lib1","SARS-CoV-2","AATCAATATAGCCTTA",1,13.24,6,-4.76,2,3,1.1,0,">1 nonsynonymous","G9A Y119C K128T F134P N157F G174C",6
"lib1","SARS-CoV-2","AATCAATATTAAGTTA",1,19.13,9.24,-1.53,0.08,2.72,1.11,0,"1 nonsynonymous","G117R",1
"lib1","SARS-CoV-2","AATCAATCCCCTAAAT",1,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H R124M S200V",3
"lib1","SARS-CoV-2","AATCAATGATGGTTAA",4,80.41,9.61,-1.15,0.12,1.74,1.09,0.01,"1 nonsynonymous","R136D",1
"lib1","SARS-CoV-2","AATCAATGGAGCGCTA",4,25.38,10.73,-0.04,0.1,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAATGTAAATCCC",8,136.65,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V11F L95S R136H Y175K",4
"lib1","SARS-CoV-2","AATCAATTACTCACGT",1,20.82,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8N A22L V77K A89M V103I",5
"lib1","SARS-CoV-2","AATCAATTAGCTTTCA",4,51.19,10.3,-0.46,0.05,2.83,1.08,0,">1 nonsynonymous","T55N S139V",2
"lib1","SARS-CoV-2","AATCAATTCCACCTCA",4,51.05,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C61Q D97A G117C R127L",4
"lib1","SARS-CoV-2","AATCAATTTACCCGCC",2,28.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96W Y123M F134L",3
"lib1","SARS-CoV-2","AATCACAAAAAGAATA",4,102.68,10.46,-0.31,0.06,2.87,1.05,0,">1 nonsynonymous","Y35P T55D K199G",3
"lib1","SARS-CoV-2","AATCACAAAAATAAGA",7,69.35,9.05,-1.71,0.08,2.78,1.11,0,">1 nonsynonymous","E10S S36L Y159F",3
"lib1","SARS-CoV-2","AATCACAAAGACAGGC",6,82.75,10.5,-0.27,0.04,2.9,1.05,0,">1 nonsynonymous","S41D D90S V173C",3
"lib1","SARS-CoV-2","AATCACAAATCTCCAC",3,31.15,10.76,0,0.05,2.86,1.11,0,">1 nonsynonymous","T140H T201M",2
"lib1","SARS-CoV-2","AATCACAACACCAAAC",6,154.2,10.53,-0.24,0.04,2.93,1.04,0,">1 nonsynonymous","N4R K56H K87L L122V",4
"lib1","SARS-CoV-2","AATCACAACCCGATCA",8,54.03,10.26,-0.51,0.12,2.55,1,0,">1 nonsynonymous","A18T V37P F62I",3
"lib1","SARS-CoV-2","AATCACAATAAGCTCA",8,93.16,10.15,-0.61,0.06,2.84,1,0,"1 nonsynonymous","N118Y",1
"lib1","SARS-CoV-2","AATCACAATGCATATT",1,13.38,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","E10D A14Q S29T G116M S139P",5
"lib1","SARS-CoV-2","AATCACACATAGCCCC",9,150.95,9.33,-1.44,0.05,2.79,1.08,0,">1 nonsynonymous","G146M K198G",2
"lib1","SARS-CoV-2","AATCACACCCAGACGG",4,0.23,NA,NA,NA,NA,NA,NA,"stop","F99* I138L",2
"lib1","SARS-CoV-2","AATCACACCTCTGTTT",10,80.47,10.09,-0.67,0.03,2.83,1.02,0,">1 nonsynonymous","D59V D90N K114S",3
"lib1","SARS-CoV-2","AATCACACTATGTAGA",9,52.86,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E76W V103R F167S",3
"lib1","SARS-CoV-2","AATCACAGACACTGGT",9,111.62,8.28,-2.48,0.19,2.05,1.11,0.01,">1 nonsynonymous","D90R T170I",2
"lib1","SARS-CoV-2","AATCACAGTTTAAATC",5,0.16,NA,NA,NA,NA,NA,NA,"stop","F12D W106*",2
"lib1","SARS-CoV-2","AATCACATACGGCCGA",1,20.75,9.21,-1.55,0.08,2.72,1.06,0,">1 nonsynonymous","K48E G166R",2
"lib1","SARS-CoV-2","AATCACATCATAAAAC",3,15.45,10.91,0.14,0.16,2.81,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AATCACATGATCTTAA",10,46.2,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N1Q D59Y R127P K199M",4
"lib1","SARS-CoV-2","AATCACATGGTACATG",3,10.88,9.42,-1.34,0.2,2.66,1.04,0.01,">1 nonsynonymous","I104Y L111T N130I F156G Q168Y",5
"lib1","SARS-CoV-2","AATCACATTAATCATG",2,23.13,9.82,-0.94,0.12,2.83,1.03,0.01,">1 nonsynonymous","A14E F156Q",2
"lib1","SARS-CoV-2","AATCACCAAGAGTAAT",4,10.81,6.06,-4.7,0.48,3,1.11,0,">1 nonsynonymous","N40L D68M V103A N107I K132T",5
"lib1","SARS-CoV-2","AATCACCAGAAAGGCT",4,3.47,NA,NA,NA,NA,NA,NA,"stop","N30* S41I L131Y",3
"lib1","SARS-CoV-2","AATCACCAGGCTCTTG",9,78.66,6,-4.76,1.41,1.5,1.17,0.01,">1 nonsynonymous","I2V T15R Y39T N107E L122A R136A N157S V173H",8
"lib1","SARS-CoV-2","AATCACCATCCCCCAC",3,23.99,6.27,-4.49,0.31,1.5,1.08,0,">1 nonsynonymous","F44E Y91H E135M E141R",4
"lib1","SARS-CoV-2","AATCACCATTACAAAC",5,139.46,9.36,-1.4,0.18,1.68,1.09,0.01,">1 nonsynonymous","A14T K56F D97S P149R",4
"lib1","SARS-CoV-2","AATCACCCAATTTACG",12,5.33,6.64,-4.13,0.67,1.69,1.14,0.02,">1 nonsynonymous","L5E N40A V103L L183P P197Y",5
"lib1","SARS-CoV-2","AATCACCCGAAAATAA",2,36.32,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K48R A89Q K128I C158F A190V S200C",6
"lib1","SARS-CoV-2","AATCACCCTACCGTTC",2,80.82,10.08,-0.69,0.08,2.82,1,0,">1 nonsynonymous","I28A N58H",2
"lib1","SARS-CoV-2","AATCACCCTACCTATG",3,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81H V103W G152N",3
"lib1","SARS-CoV-2","AATCACCCTTGGTATG",5,23.66,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86F V115L R127L",3
"lib1","SARS-CoV-2","AATCACCGTTAGACTT",5,95.76,10.7,-0.07,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCACGACGCAAGTA",7,3.07,NA,NA,NA,NA,NA,NA,"stop","Y91S G117Y S129* F160D",4
"lib1","SARS-CoV-2","AATCACGACTCCGGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib1","SARS-CoV-2","AATCACGAGATCACTA",4,43.66,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4V E10T V37G N40K C61S I88T P96D D137P P169S",9
"lib1","SARS-CoV-2","AATCACGATATCTTAC",6,146.71,10.11,-0.66,0.09,2.6,1.06,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","AATCACGCGATTCCTA",4,63.87,10.7,-0.07,0.05,2.87,1.08,0,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","AATCACGCTATTGACT",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R N157I L188N K199L",4
"lib1","SARS-CoV-2","AATCACGGCATAGAAA",1,19.23,10.54,-0.23,0.11,2.82,1.1,0,">1 nonsynonymous","G83R K87V",2
"lib1","SARS-CoV-2","AATCACGTATATGCCA",7,63.15,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","N24W K94C P191I",3
"lib1","SARS-CoV-2","AATCACGTTAAGCTGG",1,21.94,9.93,-0.84,0.11,2.58,1.11,0.01,">1 nonsynonymous","A22D A33R",2
"lib1","SARS-CoV-2","AATCACTAACTCCATA",8,50.94,6,-4.76,1.69,1.5,1.17,0.01,">1 nonsynonymous","S41I T46F Y123M P133Y N157C",5
"lib1","SARS-CoV-2","AATCACTGCTCGCGCG",1,15.62,7.32,-3.44,0.5,1.5,1.03,0.06,">1 nonsynonymous","F99T P149L",2
"lib1","SARS-CoV-2","AATCACTGTATGTTTC",5,30.54,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","T15N V182L",2
"lib1","SARS-CoV-2","AATCACTGTCGAAAAC",1,15.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T55D W106T E135L V194A",4
"lib1","SARS-CoV-2","AATCACTTAGTCAGTT",2,51.39,10.76,0,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCACTTATCTCCGA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","A105V S139V N151G Q176*",4
"lib1","SARS-CoV-2","AATCACTTCTTGAGTA",3,31.04,6,-4.76,2,1.5,1.15,0.04,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","AATCACTTTTAGGTGT",9,187.38,10.32,-0.44,0.04,2.93,1.03,0,"1 nonsynonymous","Q168N",1
"lib1","SARS-CoV-2","AATCAGAAAAAAATTC",5,0.05,NA,NA,NA,NA,NA,NA,"stop","Y93* W106F G117K C158V",4
"lib1","SARS-CoV-2","AATCAGAACAGGCTGA",7,60.42,10.77,0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAGAAGGCAAGTC",4,59.49,9.81,-0.95,0.12,2.51,1.05,0,">1 nonsynonymous","N4V D34N I142Y",3
"lib1","SARS-CoV-2","AATCAGAATTACTTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55D T85* D137R A190E",4
"lib1","SARS-CoV-2","AATCAGACAACGATGG",5,1.25,NA,NA,NA,NA,NA,NA,"stop","C6G S41Y S69* L131S P169T",5
"lib1","SARS-CoV-2","AATCAGACAATGAAAC",2,13.46,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N58D I104R Q163S",3
"lib1","SARS-CoV-2","AATCAGACCAATAAAA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","L60T T85* Q168S",3
"lib1","SARS-CoV-2","AATCAGACCGAACATT",4,49.05,10.74,-0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAGACTAAATTAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161Y",1
"lib1","SARS-CoV-2","AATCAGACTCCAAACT",3,0,NA,NA,NA,NA,NA,NA,"stop","N40D W106* R136N C150Y",4
"lib1","SARS-CoV-2","AATCAGACTTGCATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* K87E N130P G174A",4
"lib1","SARS-CoV-2","AATCAGAGGCCCATTC",2,83.66,10.86,0.09,0.05,2.91,1.05,0,">1 nonsynonymous","E10R Q163V",2
"lib1","SARS-CoV-2","AATCAGAGTTCATCAC",2,72.52,10.83,0.07,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAGATACACACGC",3,23.43,6,-4.76,2,3,1.07,0,">1 nonsynonymous","R27Y F44A Q84P Y123S Q168V",5
"lib1","SARS-CoV-2","AATCAGATATAATTGC",1,23.98,9.82,-0.94,0.07,2.92,1.04,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","AATCAGATTAACGAAA",2,14.34,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","D34S N40K Q84V E154Y F167A",5
"lib1","SARS-CoV-2","AATCAGATTAGCTATA",7,32.95,9.36,-1.4,0.15,1.83,1.16,0.01,">1 nonsynonymous","N64I Y91L D97L S129Y P149Y",5
"lib1","SARS-CoV-2","AATCAGATTCACTGAC",9,34.6,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y66C D112Y",2
"lib1","SARS-CoV-2","AATCAGCACAACCTGA",2,19.09,10.44,-0.33,0.1,2.8,1,0.01,">1 nonsynonymous","V37E A105M",2
"lib1","SARS-CoV-2","AATCAGCACTTCGCAA",6,43.71,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","R27F Y50D G155Q",3
"lib1","SARS-CoV-2","AATCAGCTATATCATT",2,42.35,10.41,-0.36,0.05,2.98,1,0,">1 nonsynonymous","G174K S184H",2
"lib1","SARS-CoV-2","AATCAGGAGCTTAATA",6,131.54,10.48,-0.28,0.04,2.92,1.02,0,">1 nonsynonymous","G9W A33C",2
"lib1","SARS-CoV-2","AATCAGGTCCTCGCCG",8,52.82,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A22T Y35S I104G N107Q C150G",5
"lib1","SARS-CoV-2","AATCAGTAAAGTGAAG",5,102.99,10.82,0.06,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCAGTAACATAATT",6,43.16,10.08,-0.68,0.17,2.07,1.01,0.01,">1 nonsynonymous","Q84L S184E",2
"lib1","SARS-CoV-2","AATCAGTACATAGACA",4,39.96,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8L R16N W106E I142S",4
"lib1","SARS-CoV-2","AATCAGTACGAGTCAA",2,23.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N92R V103G F167L",3
"lib1","SARS-CoV-2","AATCAGTATAACTTTG",1,1.64,NA,NA,NA,NA,NA,NA,"stop","G86* L131S",2
"lib1","SARS-CoV-2","AATCAGTATCCAGAGC",1,40.76,8.76,-2,0.29,1.5,1.09,0.03,">1 nonsynonymous","F44L Y50I",2
"lib1","SARS-CoV-2","AATCAGTCAACACACA",5,44.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10R S43I N58L V181E K198G",5
"lib1","SARS-CoV-2","AATCAGTGAAGCCCAA",1,10.88,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","R16E K48S S69G S129L N157T",5
"lib1","SARS-CoV-2","AATCAGTGTGATTCGG",1,2.74,NA,NA,NA,NA,NA,NA,"stop","T3V F17P D34Q C61R D97I N118* I138*",7
"lib1","SARS-CoV-2","AATCAGTTATACTAAC",4,0.42,NA,NA,NA,NA,NA,NA,"stop","C6L V103L R136N Q168*",4
"lib1","SARS-CoV-2","AATCAGTTCAATCTAT",3,104.71,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","F12A N24V K87E W106K",4
"lib1","SARS-CoV-2","AATCATAAACCGTTTT",10,2.15,NA,NA,NA,NA,NA,NA,"stop","A42* T63R K94A",3
"lib1","SARS-CoV-2","AATCATAAATCGTCCA",3,75.58,9.07,-1.69,0.1,2.52,1.17,0,">1 nonsynonymous","R73P P149K",2
"lib1","SARS-CoV-2","AATCATAACTAAAATT",2,79.03,10.75,-0.01,0.1,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCATAAGATACAAT",3,0.35,NA,NA,NA,NA,NA,NA,"stop","R16T N120S F156* K198L",4
"lib1","SARS-CoV-2","AATCATAAGTTAACGG",6,76.81,9.67,-1.1,0.08,1.96,1.06,0,"1 nonsynonymous","C49Y",1
"lib1","SARS-CoV-2","AATCATAATTAATAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","N4* G146L Y178C S184H",4
"lib1","SARS-CoV-2","AATCATATACTTAATA",1,15.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C61L T100D A105Q",3
"lib1","SARS-CoV-2","AATCATATTAGGTTTA",1,11.46,6,-4.76,2,3,1.03,0.01,">1 nonsynonymous","F12Y P82L K87C S129V",4
"lib1","SARS-CoV-2","AATCATATTGGTAAGC",5,36.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L N107F",2
"lib1","SARS-CoV-2","AATCATCAACAGTTGA",5,44.92,8.47,-2.3,0.24,1.64,1.13,0.03,">1 nonsynonymous","K94L K128D C195H",3
"lib1","SARS-CoV-2","AATCATCAAGAAATTT",6,36.01,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N4F P54T S113F S129M G166K",5
"lib1","SARS-CoV-2","AATCATCATGGAAAAC",10,37.31,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","V77S G83E T100K Y121G K128D",5
"lib1","SARS-CoV-2","AATCATCCCGATGACA",10,175.11,10.05,-0.72,0.06,2.78,1.02,0,">1 nonsynonymous","E10G R78L",2
"lib1","SARS-CoV-2","AATCATCCGAGACTCT",5,15.43,10.36,-0.41,0.1,2.83,1.03,0.01,">1 nonsynonymous","P7R A14R I104M",3
"lib1","SARS-CoV-2","AATCATCGGTTCCATC",7,69.42,9.65,-1.12,0.13,1.78,1.07,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","AATCATCTCCCGTTAG",3,80.19,10.49,-0.28,0.06,2.94,1.03,0,">1 nonsynonymous","T15V Y39R",2
"lib1","SARS-CoV-2","AATCATCTCTGCATCA",2,70.32,10.02,-0.74,0.06,2.73,1.02,0,">1 nonsynonymous","Y91A F134G",2
"lib1","SARS-CoV-2","AATCATGAAAAAACAT",5,91.55,10.65,-0.12,0.04,2.91,1.05,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","AATCATGAATCATCCT",8,266.56,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V11C N64E T100I K128L F167S Q176S",6
"lib1","SARS-CoV-2","AATCATGAGATACAAC",4,27.91,6.45,-4.31,0.35,1.5,1.08,0.01,">1 nonsynonymous","F8M D68V V103T C150G",4
"lib1","SARS-CoV-2","AATCATGAGCTAAATG",1,21.42,10.57,-0.19,0.07,2.77,1.02,0,">1 nonsynonymous","S41F L122M E141Y",3
"lib1","SARS-CoV-2","AATCATGATAGGGAAT",10,129.23,8.51,-2.26,0.09,2.39,1.1,0,">1 nonsynonymous","N4F G146K",2
"lib1","SARS-CoV-2","AATCATGCGCATGCAA",5,29.16,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33R F70I Y119V L131S",4
"lib1","SARS-CoV-2","AATCATGCTCAGTACA",2,36.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25S F167I L183M K198G",4
"lib1","SARS-CoV-2","AATCATGGTCGAGTCA",3,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141S F167R",2
"lib1","SARS-CoV-2","AATCATGTCTTGTGTA",7,170.47,10.32,-0.45,0.05,2.89,1.04,0,">1 nonsynonymous","D98F T140K",2
"lib1","SARS-CoV-2","AATCATGTTACATTCC",6,38.55,8.2,-2.57,0.36,1.5,1,0.08,">1 nonsynonymous","C61V I80N L95Q P133T P161K",5
"lib1","SARS-CoV-2","AATCATTAAACATACC",3,9.75,10.06,-0.71,0.15,2.07,1.07,0.01,">1 nonsynonymous","N13V S41L N120M",3
"lib1","SARS-CoV-2","AATCATTAATGCTAAT",2,20.96,10.99,0.23,0.1,2.95,1,0,">1 nonsynonymous","V37I S164K",2
"lib1","SARS-CoV-2","AATCATTAGTTAGAAC",5,66.63,8.74,-2.02,0.18,2.1,1.17,0.01,">1 nonsynonymous","N107H T148R",2
"lib1","SARS-CoV-2","AATCATTATACATGAC",1,20.26,6,-4.76,2,3,1.21,0,">1 nonsynonymous","T100M N120L C150S T170I",4
"lib1","SARS-CoV-2","AATCATTATTCACACG",2,13.64,10.31,-0.46,0.11,2.9,1.03,0.01,"1 nonsynonymous","F44E",1
"lib1","SARS-CoV-2","AATCATTCACTAGGCA",2,5.31,10.88,0.11,0.1,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCATTCGCAACATA",3,147.82,10.66,-0.11,0.03,2.97,1,0,">1 nonsynonymous","I2V V37G T55A R73K R78S",5
"lib1","SARS-CoV-2","AATCATTCGTAAAAAC",4,67.04,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3I D112G K199M",3
"lib1","SARS-CoV-2","AATCATTGACGGACCC",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C G86L F134I",3
"lib1","SARS-CoV-2","AATCATTGAGGACCGG",7,47.07,10.72,-0.04,0.06,2.93,1.03,0,">1 nonsynonymous","L122C T140A",2
"lib1","SARS-CoV-2","AATCATTGTGGTGGAA",4,52.49,8.07,-2.69,0.3,1.5,1.21,0.02,">1 nonsynonymous","F12V S45A Q84R G117A",4
"lib1","SARS-CoV-2","AATCATTGTTCACAGA",17,1.81,NA,NA,NA,NA,NA,NA,"stop","D68L L95A V103*",3
"lib1","SARS-CoV-2","AATCATTTAACACCAA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","Y39* I142F",2
"lib1","SARS-CoV-2","AATCATTTAAGTAAAT",1,20.27,10.95,0.18,0.09,2.98,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATCATTTACATATAC",7,111.87,10.26,-0.51,0.04,2.83,1.08,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","AATCATTTGCCGAAAG",6,52.39,8.23,-2.53,0.12,1.78,1.13,0,">1 nonsynonymous","F44W R78H W106C K114F G174L",5
"lib1","SARS-CoV-2","AATCATTTTTACGTAG",4,50.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D90V D137Y S200L",3
"lib1","SARS-CoV-2","AATCCAAAAAATTCAT",1,19.91,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D59T G86V I104M N120S F160Y",5
"lib1","SARS-CoV-2","AATCCAAAAATGTAAA",2,0.78,NA,NA,NA,NA,NA,NA,"stop","F12Y A22I K128* Q163S T170S",5
"lib1","SARS-CoV-2","AATCCAAAACCAAGCT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K R136G",2
"lib1","SARS-CoV-2","AATCCAAAATCAATTA",10,154.2,10.73,-0.04,0.07,2.82,1.06,0,">1 nonsynonymous","T85K N120A",2
"lib1","SARS-CoV-2","AATCCAAACCAGCGAG",6,6.95,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5H Y119I V181E",3
"lib1","SARS-CoV-2","AATCCAAACTCTAGAA",1,29.02,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y91I L162G",2
"lib1","SARS-CoV-2","AATCCAAAGCGCAGCT",7,51.16,10.45,-0.31,0.07,2.85,1.03,0,">1 nonsynonymous","Y123K P133S",2
"lib1","SARS-CoV-2","AATCCAAATGGCAAAG",6,2.25,NA,NA,NA,NA,NA,NA,"stop","Y39D K56P E154* Y175D",4
"lib1","SARS-CoV-2","AATCCAACAAATTCGA",7,67.28,10.04,-0.73,0.04,2.9,1.06,0,">1 nonsynonymous","N118Y K198D",2
"lib1","SARS-CoV-2","AATCCAACAAGGTAAA",3,19.7,6,-4.76,2,2.14,1.12,0,">1 nonsynonymous","D112T Y119D G152M T201S",4
"lib1","SARS-CoV-2","AATCCAACATGAGTAA",10,135.41,10.67,-0.09,0.06,2.9,1.06,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","AATCCAACCTAAAGAG",3,11.35,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P82Q I88C L95E",3
"lib1","SARS-CoV-2","AATCCAACTCAAAAGC",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L Y178T",2
"lib1","SARS-CoV-2","AATCCAAGAAAGCTAG",1,40.66,8.78,-1.98,0.14,2.45,1.2,0.01,">1 nonsynonymous","L122S Y165Q",2
"lib1","SARS-CoV-2","AATCCAAGAAAGTTGG",5,21.86,7.63,-3.13,0.29,1.5,1.21,0.03,">1 nonsynonymous","I2A C49I N130V G146T",4
"lib1","SARS-CoV-2","AATCCAAGACCTAAGT",3,5.83,10.49,-0.28,0.15,2.91,1.02,0.01,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","AATCCAAGATGCATTG",3,47.86,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L38S G83M L122M G172C",4
"lib1","SARS-CoV-2","AATCCAAGCCCCCATG",1,46.29,9.37,-1.39,0.12,1.95,1.12,0.01,">1 nonsynonymous","A81E G152C F160P",3
"lib1","SARS-CoV-2","AATCCAAGTTCGAAAT",2,6.35,6,-4.76,1.5,3,1.11,0.01,">1 nonsynonymous","V103M Y143M Q163R Y175A",4
"lib1","SARS-CoV-2","AATCCAATACTGTGAA",3,23.24,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V20P F70T A81T",3
"lib1","SARS-CoV-2","AATCCAATATTGTTAA",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59W Q79L P96Y",3
"lib1","SARS-CoV-2","AATCCAATCTCCACTT",2,21.94,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D98V G172M",2
"lib1","SARS-CoV-2","AATCCAATGGATATTG",1,25.44,8.89,-1.88,0.11,2.86,1.1,0.01,">1 nonsynonymous","V52I T100Y N157T",3
"lib1","SARS-CoV-2","AATCCAATGTCCATGG",4,28.79,7.78,-2.98,0.31,1.5,1.15,0.02,">1 nonsynonymous","Y21R S41D",2
"lib1","SARS-CoV-2","AATCCAATTAGATAGA",6,74.23,10.21,-0.55,0.09,2.48,1,0,">1 nonsynonymous","A33L P133N",2
"lib1","SARS-CoV-2","AATCCAATTCTTTAAA",1,21.5,9.8,-0.96,0.1,1.95,1.07,0,">1 nonsynonymous","S36C T46V D59H G116R",4
"lib1","SARS-CoV-2","AATCCAATTGAGGTCC",4,53.68,7.14,-3.62,0.32,1.5,1.15,0.02,">1 nonsynonymous","G86T E154I",2
"lib1","SARS-CoV-2","AATCCACAAAATACTT",1,21.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V11T G86W Y143M",3
"lib1","SARS-CoV-2","AATCCACAATTACATA",3,26.94,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","K56R F99N V115E K128I T201M",5
"lib1","SARS-CoV-2","AATCCACATGGAAATG",3,11.07,6.89,-3.88,0.42,1.99,1.15,0.02,">1 nonsynonymous","V20K A81K K94A G116W N157H",5
"lib1","SARS-CoV-2","AATCCACCAAGCAATA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138V S164F A190I T201A",4
"lib1","SARS-CoV-2","AATCCACCTCATGTGT",4,45.59,9.42,-1.34,0.16,1.96,1.15,0.01,">1 nonsynonymous","Y91S V115F",2
"lib1","SARS-CoV-2","AATCCACCTTTCGCTA",4,26.2,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","G9V I72R K94V Y123V N151D T170L",6
"lib1","SARS-CoV-2","AATCCACGAGCCGACG",4,32.88,9.05,-1.72,0.18,1.72,1.06,0.02,">1 nonsynonymous","I2R V65F Y91T",3
"lib1","SARS-CoV-2","AATCCACGGTATGTTT",2,57.81,8.23,-2.53,0.11,2.65,1.08,0.01,"1 nonsynonymous","Y175V",1
"lib1","SARS-CoV-2","AATCCACTAGAGTAAA",7,29.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80H P96L",2
"lib1","SARS-CoV-2","AATCCACTGTATTTAC",3,112.71,10.7,-0.06,0.04,2.92,1.03,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","AATCCACTTCCTTAAA",4,37.43,10.78,0.02,0.07,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCAGAACCTTTAA",1,14.47,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","AATCCAGAACGAAATT",2,103.33,8.22,-2.54,0.27,1.6,1.2,0.03,">1 nonsynonymous","N4E E10V G83M G146M N151H P197T",6
"lib1","SARS-CoV-2","AATCCAGCAACATAGA",2,80.62,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K56A L95I G101A R127C N151Y G155P Y165H P177L",8
"lib1","SARS-CoV-2","AATCCAGCATTGATAC",6,54.75,6,-4.76,1.34,1.5,1.1,0.01,">1 nonsynonymous","A14T L38P L57P D90C Y119W I142F",6
"lib1","SARS-CoV-2","AATCCAGCGACATGAT",13,193.71,10.74,-0.02,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCAGGGCGTCTAA",7,84.66,10.87,0.1,0.07,2.89,1.04,0,">1 nonsynonymous","Y39T V65I",2
"lib1","SARS-CoV-2","AATCCAGTAATTTCGG",1,46.58,10.03,-0.73,0.06,2.5,1.05,0,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","AATCCAGTCACCATAG",1,36.22,10.72,-0.05,0.04,2.98,1.01,0,">1 nonsynonymous","K56S N64A H189Y",3
"lib1","SARS-CoV-2","AATCCAGTCATATAAC",6,56.61,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37A R73W P82A",3
"lib1","SARS-CoV-2","AATCCAGTGCATCTTT",2,0.56,NA,NA,NA,NA,NA,NA,"stop","K26M C102Q L111S Y123A N130*",5
"lib1","SARS-CoV-2","AATCCAGTTCCATGGC",5,22.53,6.41,-4.36,0.41,1.5,1.09,0.02,">1 nonsynonymous","N1M I88V F167Q",3
"lib1","SARS-CoV-2","AATCCATAAAATGAGA",5,40.48,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A14N A33H S45W R179S L187G",5
"lib1","SARS-CoV-2","AATCCATAATCTCAGG",3,2.12,NA,NA,NA,NA,NA,NA,"stop","L5* N157H N171S",3
"lib1","SARS-CoV-2","AATCCATACAGTTAAA",3,76.21,10.2,-0.56,0.05,2.91,1.02,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","AATCCATACTACTATC",2,22.18,7.51,-3.26,0.3,1.5,1.08,0.03,">1 nonsynonymous","L5K V20M",2
"lib1","SARS-CoV-2","AATCCATACTGCATAA",6,1.45,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","AATCCATAGAGTATAA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","A89* K128D F134D E154Y",4
"lib1","SARS-CoV-2","AATCCATATCAGCCAA",3,27.29,6.83,-3.94,0.54,1.5,1.32,0.05,">1 nonsynonymous","L57T P133K",2
"lib1","SARS-CoV-2","AATCCATATTTTACGG",11,168.62,8.8,-1.96,0.14,1.67,1.15,0.01,">1 nonsynonymous","N30L K87T F185P",3
"lib1","SARS-CoV-2","AATCCATCAAGAATAA",6,1.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73I",1
"lib1","SARS-CoV-2","AATCCATCAATAGATG",6,0.98,NA,NA,NA,NA,NA,NA,"stop","Y119K F126* K132A S164V",4
"lib1","SARS-CoV-2","AATCCATCCACAGACC",1,13.47,10.52,-0.24,0.08,2.88,1.1,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","AATCCATGTTAAACCC",8,79.05,8.86,-1.91,0.22,1.68,1.16,0.02,">1 nonsynonymous","G86A N120G",2
"lib1","SARS-CoV-2","AATCCATTGTACCTGA",2,10.89,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A18G T85S V103L F167L",4
"lib1","SARS-CoV-2","AATCCATTTCCACAGA",4,36.21,10.8,0.04,0.06,2.93,1.04,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","AATCCCAAAGGGAAAT",4,10.07,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K48G N64D T85M I88T L95Y W106K Y123H N151S",8
"lib1","SARS-CoV-2","AATCCCAAATACAGTA",3,67.41,7.22,-3.55,0.28,1.5,1.12,0.02,">1 nonsynonymous","D97T K114L A145L Y178T",4
"lib1","SARS-CoV-2","AATCCCAAATACTCCA",1,27.65,10.51,-0.26,0.06,2.93,1.01,0,">1 nonsynonymous","G174M S200L",2
"lib1","SARS-CoV-2","AATCCCAAATGTGCAT",2,30.68,9.48,-1.29,0.35,1.5,1.01,0.05,"1 nonsynonymous","A89K",1
"lib1","SARS-CoV-2","AATCCCAACAATAAAA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","C61L G101* N118K S129N T201K",5
"lib1","SARS-CoV-2","AATCCCAAGTATAAAA",3,75.61,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44R N109D L125Y Y159F",4
"lib1","SARS-CoV-2","AATCCCAAGTCGATAC",2,20.49,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","I88T I104K",2
"lib1","SARS-CoV-2","AATCCCACACATTGTA",6,127.49,7.88,-2.88,0.16,1.79,1.15,0.01,">1 nonsynonymous","F12T Q168D",2
"lib1","SARS-CoV-2","AATCCCACCTGAACTT",7,66.77,9.53,-1.24,0.23,1.5,1,0.02,"1 nonsynonymous","G86K",1
"lib1","SARS-CoV-2","AATCCCAGCCAGAATG",3,66.55,11.01,0.25,0.1,2.91,1.04,0,">1 nonsynonymous","G9S Y123F",2
"lib1","SARS-CoV-2","AATCCCAGCGGTATGA",2,38.65,10.42,-0.34,0.08,2.94,1,0,">1 nonsynonymous","I2T N120K I138H G174A",4
"lib1","SARS-CoV-2","AATCCCATAGGCGGTA",10,72.35,8.7,-2.06,0.07,2.72,1.04,0,">1 nonsynonymous","K114G G155I Q168R",3
"lib1","SARS-CoV-2","AATCCCATCACAACTA",13,31.68,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P54K G101D L122N K128R",4
"lib1","SARS-CoV-2","AATCCCATCTAACTGG",2,39.8,9.47,-1.29,0.11,2.78,1.15,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","AATCCCATGATGTGTA",3,608.15,9.45,-1.31,0.06,2.82,1.08,0,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","AATCCCATTACCTCTG",3,6.17,8.78,-1.99,0.16,2.38,1.14,0.01,">1 nonsynonymous","A14G K128C Q168E",3
"lib1","SARS-CoV-2","AATCCCATTCACAACT",11,91.74,8.32,-2.45,0.21,1.74,1.09,0.02,">1 nonsynonymous","D98A A105M L122S T170Y",4
"lib1","SARS-CoV-2","AATCCCATTGAGCAAG",2,9.74,11,0.23,0.09,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCCCAACGCAAAC",4,6.3,6.41,-4.35,1.18,1.5,1.21,0.04,"1 nonsynonymous","Y93M",1
"lib1","SARS-CoV-2","AATCCCCATCAGAGTG",3,47.39,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L5Q T55F G86P K199N",4
"lib1","SARS-CoV-2","AATCCCCCACAGTATA",3,20.49,6.4,-4.37,1.11,1.5,1.36,0.07,">1 nonsynonymous","P82S N120L",2
"lib1","SARS-CoV-2","AATCCCCCCATGTTCC",4,28.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N1V P82Q A89S D137F",4
"lib1","SARS-CoV-2","AATCCCCTAAACCTCG",2,79.96,10.23,-0.53,0.04,2.74,1.01,0,">1 nonsynonymous","N130S I138P N151E",3
"lib1","SARS-CoV-2","AATCCCCTAATTACCT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","L5N N92* Y175* T201E",4
"lib1","SARS-CoV-2","AATCCCCTACATAACG",3,6.21,6,-4.76,2,3,1.08,0,">1 nonsynonymous","P82G A89V Y93Q",3
"lib1","SARS-CoV-2","AATCCCCTATCAGAAA",3,20.32,10.86,0.1,0.09,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCCCTCGCACCCT",6,31.52,6.05,-4.71,1.45,1.5,1.15,0.05,">1 nonsynonymous","I2L Q84S P96S L162P",4
"lib1","SARS-CoV-2","AATCCCCTGTCCACGT",5,129.08,7.74,-3.02,0.21,1.5,1.13,0.01,">1 nonsynonymous","T100A E141A P177S",3
"lib1","SARS-CoV-2","AATCCCCTTGCACATG",3,11.97,10.68,-0.08,0.05,3,1,0,">1 nonsynonymous","T140V N151E",2
"lib1","SARS-CoV-2","AATCCCGAACCCGCCG",2,22.54,6.22,-4.54,0.97,1.5,1.2,0.05,">1 nonsynonymous","N4I W23T",2
"lib1","SARS-CoV-2","AATCCCGACTTGGGGT",5,2.24,NA,NA,NA,NA,NA,NA,"stop","N13Y Y143*",2
"lib1","SARS-CoV-2","AATCCCGCAGGAAATG",3,53.61,10.06,-0.71,0.09,2.37,1.03,0,">1 nonsynonymous","K26I L57P",2
"lib1","SARS-CoV-2","AATCCCGCGAGAAACG",6,58.35,10.65,-0.12,0.06,2.92,1.04,0,"1 nonsynonymous","N58Q",1
"lib1","SARS-CoV-2","AATCCCGCTAGGATTA",5,111.35,10.57,-0.19,0.05,2.91,1.01,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","AATCCCGGAAAACACA",1,0.77,NA,NA,NA,NA,NA,NA,"stop","P54* C61E G83*",3
"lib1","SARS-CoV-2","AATCCCGGCATACGCG",5,10.39,10.12,-0.64,0.06,2.76,1.06,0,">1 nonsynonymous","L38I D75W T201K",3
"lib1","SARS-CoV-2","AATCCCGGCTACAAAA",2,20.61,6,-4.76,2,3,1.19,0.01,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","AATCCCGGTACTCTCA",5,156.53,10.71,-0.05,0.05,2.94,1.02,0,">1 nonsynonymous","L111C T201L",2
"lib1","SARS-CoV-2","AATCCCTAAATGCAGT",1,2.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101C",1
"lib1","SARS-CoV-2","AATCCCTAACCACGAA",1,63.17,9.97,-0.8,0.09,2.44,1.03,0,">1 nonsynonymous","Y35R G152S",2
"lib1","SARS-CoV-2","AATCCCTAATAACAGG",5,98.9,10.58,-0.18,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCCTAATTATAAT",8,57.85,10.5,-0.26,0.04,2.92,1.03,0,">1 nonsynonymous","A42G C61I P149F",3
"lib1","SARS-CoV-2","AATCCCTACGACCCAT",4,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S164R",1
"lib1","SARS-CoV-2","AATCCCTAGATATGTC",3,32.52,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","L5Q L60V Y93C",3
"lib1","SARS-CoV-2","AATCCCTATTTAATGA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110R Y119A R127L",3
"lib1","SARS-CoV-2","AATCCCTCAAGATACG",1,23.44,10.6,-0.17,0.11,2.84,1.15,0.01,"1 nonsynonymous","D97I",1
"lib1","SARS-CoV-2","AATCCCTCATTCATAT",12,4.14,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib1","SARS-CoV-2","AATCCCTTAAGTAGAA",2,13.48,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F44P P96T N107F",3
"lib1","SARS-CoV-2","AATCCCTTGTAAATGG",8,50.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N107I Y121D I138A Y165G",4
"lib1","SARS-CoV-2","AATCCCTTTCCACCTA",2,50.28,8.3,-2.47,0.17,2.32,1.16,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","AATCCCTTTCGAGAAT",9,46.41,6.25,-4.52,0.34,1.5,1.12,0.01,">1 nonsynonymous","V37A G51Y K87S Y91I N107I N171F",6
"lib1","SARS-CoV-2","AATCCCTTTTACAGAA",1,73.58,6,-4.76,2,2.18,1.08,0,">1 nonsynonymous","A18T F47M N107G D137Q C158V",5
"lib1","SARS-CoV-2","AATCCGAAAATAACAA",7,127.76,8.3,-2.47,0.17,2.01,1.16,0.01,">1 nonsynonymous","L5S F8Y S113F",3
"lib1","SARS-CoV-2","AATCCGAAAGATATAC",3,0.07,NA,NA,NA,NA,NA,NA,"stop","S36T D68Y V77L V173*",4
"lib1","SARS-CoV-2","AATCCGAATCAGGAAT",3,73.35,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G146F G172S",2
"lib1","SARS-CoV-2","AATCCGACCAATATCA",6,134.12,10.78,0.02,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCGACTTCCTCTG",2,62.92,6.4,-4.37,0.41,1.5,1.2,0.01,">1 nonsynonymous","F44R L60K A81H",3
"lib1","SARS-CoV-2","AATCCGATCCATTGAG",5,0.78,NA,NA,NA,NA,NA,NA,"stop","S19A F44L Y121*",3
"lib1","SARS-CoV-2","AATCCGCCAATCAACA",12,195.69,8.82,-1.95,0.15,1.7,1.16,0.01,">1 nonsynonymous","V37A Y91D P149M K198N",4
"lib1","SARS-CoV-2","AATCCGCGAACGAAAT",6,162.84,10.81,0.04,0.07,2.9,1.06,0,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","AATCCGGAGATCTCCG",2,52.74,10.69,-0.08,0.03,2.94,1.01,0,"1 nonsynonymous","I72V",1
"lib1","SARS-CoV-2","AATCCGGCTAATCAGC",2,0.87,NA,NA,NA,NA,NA,NA,"stop","S36L N107* T201S",3
"lib1","SARS-CoV-2","AATCCGGGAGGCAAAT",2,58.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P149V G172R",2
"lib1","SARS-CoV-2","AATCCGGGTACAAAAT",1,16.61,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","D112Q Y123D",2
"lib1","SARS-CoV-2","AATCCGGTGCCGAGAG",1,12.76,10.07,-0.69,0.13,2.95,1,0,">1 nonsynonymous","T15P F134E",2
"lib1","SARS-CoV-2","AATCCGGTTTACACCT",4,41.48,9.1,-1.67,0.24,1.5,1.15,0.03,">1 nonsynonymous","N4K Y50N P191R",3
"lib1","SARS-CoV-2","AATCCGTCCCTGTTAC",4,19.3,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D90F F167V",2
"lib1","SARS-CoV-2","AATCCGTCGTATGCCT",2,17.21,9.05,-1.71,0.13,1.56,1.03,0.01,">1 nonsynonymous","C61F L183Y",2
"lib1","SARS-CoV-2","AATCCGTCTTGTCATA",4,100.58,7.14,-3.63,0.08,1.5,1.07,0,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","AATCCTAACAAGAAAC",2,27.84,10.77,0,0.1,2.93,1.03,0.01,"1 nonsynonymous","S43R",1
"lib1","SARS-CoV-2","AATCCTAAGACATTCA",10,63.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2S F8G C61G G146E Y165E",5
"lib1","SARS-CoV-2","AATCCTAATATATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L N107T G116T L188M",4
"lib1","SARS-CoV-2","AATCCTAATGGACAAA",3,0.54,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib1","SARS-CoV-2","AATCCTACGAATAAAA",1,40.98,10.65,-0.12,0.04,2.85,1.06,0,">1 nonsynonymous","K56A G196W",2
"lib1","SARS-CoV-2","AATCCTATACAGTGGG",1,26.07,10.76,0,0.05,2.87,1.04,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","AATCCTATGAAAATAA",1,80.98,10.45,-0.31,0.03,2.93,1.04,0,"1 nonsynonymous","K87V",1
"lib1","SARS-CoV-2","AATCCTATTAAAGCAA",2,19.47,8.13,-2.63,0.21,1.5,1.06,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","AATCCTATTAATGCAA",4,38.32,7.39,-3.37,0.14,1.72,1.07,0.01,">1 nonsynonymous","A145Q C158R",2
"lib1","SARS-CoV-2","AATCCTCAATCAACCT",18,7.04,9.98,-0.79,0.24,2.17,1.11,0.03,"synonymous","",0
"lib1","SARS-CoV-2","AATCCTCACCCTATGC",3,62.23,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","R27W C49L P161W Q168W",4
"lib1","SARS-CoV-2","AATCCTCATAACACAA",6,31.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90A G101S A105M",3
"lib1","SARS-CoV-2","AATCCTCATCTAACAG",10,92.29,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S53F D90I D112A F167T R179M",5
"lib1","SARS-CoV-2","AATCCTCGTTGACATT",2,10.34,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9Y N58S C150S",3
"lib1","SARS-CoV-2","AATCCTCTCCAACCTT",1,22.86,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F8N F17Y Y66T V103T E141K",5
"lib1","SARS-CoV-2","AATCCTCTTGGTATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R V115L D137G S147W P191C",5
"lib1","SARS-CoV-2","AATCCTGAAGCATAAT",2,30.29,10.13,-0.64,0.09,2.66,1.03,0,">1 nonsynonymous","Q84I Y91M",2
"lib1","SARS-CoV-2","AATCCTGACTTGGCTA",7,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M N64L T85L",3
"lib1","SARS-CoV-2","AATCCTGGAACTAATA",2,20.01,6.23,-4.54,0.9,1.5,1.25,0.06,">1 nonsynonymous","K94D R136K",2
"lib1","SARS-CoV-2","AATCCTGGACATGCCG",1,19.92,10.85,0.08,0.09,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCTGGCGCAATAA",2,44.79,10.48,-0.28,0.09,2.86,1.07,0,">1 nonsynonymous","N120D E135H",2
"lib1","SARS-CoV-2","AATCCTGTCCACGTTG",3,40.8,6.18,-4.59,1.01,1.5,1.22,0.05,">1 nonsynonymous","T15L Y119C S147L T170R",4
"lib1","SARS-CoV-2","AATCCTGTTAACAAAC",1,9.75,10.63,-0.14,0.12,2.84,1.07,0.01,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AATCCTTAACAGATGT",3,27.43,8.32,-2.45,0.18,1.76,1.17,0.01,"1 nonsynonymous","G174I",1
"lib1","SARS-CoV-2","AATCCTTAGCACCGGG",3,68.61,9.77,-1,0.06,2.83,1.07,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","AATCCTTAGCATGAAT",1,32.05,10.1,-0.66,0.12,2.55,1,0.01,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","AATCCTTCTAAGTTAT",15,263.85,10.35,-0.41,0.06,2.88,1.04,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","AATCCTTGGCCATCAC",5,74.81,10.56,-0.21,0.06,2.96,1.01,0,">1 nonsynonymous","G9Q S41R",2
"lib1","SARS-CoV-2","AATCCTTTGAATGACC",1,39.94,10.85,0.08,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCCTTTTACGACAA",1,15.31,10.79,0.02,0.11,2.94,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATCCTTTTGAACGCG",1,5.84,8.59,-2.18,0.43,1.72,1.27,0.04,">1 nonsynonymous","F62I G83Q F99L",3
"lib1","SARS-CoV-2","AATCGAAAAAGAGTTA",7,1.26,NA,NA,NA,NA,NA,NA,"stop","T85S K128* E154S",3
"lib1","SARS-CoV-2","AATCGAAAAATCGTTC",2,1.04,NA,NA,NA,NA,NA,NA,"stop","L60I D68* D90A F99D",4
"lib1","SARS-CoV-2","AATCGAAAGTTATTTT",1,10.95,10.92,0.16,0.1,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCGAAATGCTTAAT",1,11.51,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A89Y V103L",2
"lib1","SARS-CoV-2","AATCGAACAAGTAACA",4,15.9,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G86V W106P G117S I142Y",4
"lib1","SARS-CoV-2","AATCGAACGAACTGGC",5,37.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16V F44W L60C P96C L122V S129G T148K",7
"lib1","SARS-CoV-2","AATCGAACGCGTAAAT",5,28.65,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4R V103K S139I S184Y",4
"lib1","SARS-CoV-2","AATCGAACTAGAAAAT",4,32.01,7.97,-2.79,0.23,1.5,1.08,0.02,">1 nonsynonymous","Y50K L125V",2
"lib1","SARS-CoV-2","AATCGAAGCAAATCCC",1,16.08,11.13,0.36,0.13,2.83,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATCGAAGCCTGAACG",1,7.08,6,-4.76,2,1.5,1.4,0.07,">1 nonsynonymous","F17S D90S W106V Y119R",4
"lib1","SARS-CoV-2","AATCGAAGGCCTAAAT",4,7.75,10.73,-0.04,0.25,2.63,1.23,0.03,">1 nonsynonymous","D97T L188N",2
"lib1","SARS-CoV-2","AATCGAAGTCGATTAA",2,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y K56W Y93F N107F Y165Q",5
"lib1","SARS-CoV-2","AATCGAAGTCTAACTA",1,23.09,8.26,-2.51,0.35,1.5,1,0.08,">1 nonsynonymous","R25S L122R R136S L162S",4
"lib1","SARS-CoV-2","AATCGAATGCACAACG",1,10.51,8.09,-2.68,0.14,2.99,1,0.01,">1 nonsynonymous","V11Y Y119A F160P",3
"lib1","SARS-CoV-2","AATCGAATGTAATAGC",2,21.15,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V77K D90S V181T",3
"lib1","SARS-CoV-2","AATCGACAAACGGCAT",4,82.13,8.45,-2.31,0.16,2.32,1.14,0.01,">1 nonsynonymous","L5V S45T F134S G166W",4
"lib1","SARS-CoV-2","AATCGACACAAAAAAA",3,25.86,8.23,-2.54,0.3,1.5,1.14,0.04,">1 nonsynonymous","C61I T85Y Y91Q",3
"lib1","SARS-CoV-2","AATCGACACCCAGGAT",7,95.82,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V32I F70K E141P",3
"lib1","SARS-CoV-2","AATCGACACGAAAAAG",3,136.04,7.56,-3.2,0.14,1.99,1.12,0.01,">1 nonsynonymous","G83M C150N C158E",3
"lib1","SARS-CoV-2","AATCGACAGATAGGTC",5,75.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N30A Y50L N64L",3
"lib1","SARS-CoV-2","AATCGACCAACAGACT",7,259.67,8.24,-2.52,0.15,2.34,1.09,0.01,"1 nonsynonymous","S113D",1
"lib1","SARS-CoV-2","AATCGACCCTCAAGTT",10,1.31,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","AATCGACGTTCCTCCT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","F44* N64V V103Q I138M",4
"lib1","SARS-CoV-2","AATCGACTGAGCACGC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* Y93G V182S",3
"lib1","SARS-CoV-2","AATCGAGAAAGGTGAG",4,169.3,10.25,-0.51,0.03,2.9,1.03,0,">1 nonsynonymous","N30R Y143H T201R",3
"lib1","SARS-CoV-2","AATCGAGAACACACGT",9,90.42,9.92,-0.85,0.07,2.79,1.03,0,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","AATCGAGAGCACCTAA",7,79.46,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","Y50P",1
"lib1","SARS-CoV-2","AATCGAGCCTTTCTAG",1,16.39,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N4V D68G A81Y",3
"lib1","SARS-CoV-2","AATCGAGCGGTCCTTA",1,8.44,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","F12G V103N N151H",3
"lib1","SARS-CoV-2","AATCGAGGCTAATTAC",7,82.65,10.43,-0.33,0.06,2.94,1.01,0,">1 nonsynonymous","S29L K56S",2
"lib1","SARS-CoV-2","AATCGAGGGTGTATAC",2,21.94,10.84,0.07,0.07,2.89,1.05,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","AATCGAGGTAGTCCCA",6,136.91,8.13,-2.63,0.16,2.22,1.17,0.01,">1 nonsynonymous","S29F Y159A T201N",3
"lib1","SARS-CoV-2","AATCGAGTACCGTTTA",2,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A G9R D59R T85H K94Y V103W",6
"lib1","SARS-CoV-2","AATCGAGTCTGATAGC",11,108.44,9.69,-1.07,0.07,2.01,1.07,0,">1 nonsynonymous","R27V Y91V P149C",3
"lib1","SARS-CoV-2","AATCGAGTGTCCACAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M T55I A89D",3
"lib1","SARS-CoV-2","AATCGAGTTATTAATA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","Y121* F167K",2
"lib1","SARS-CoV-2","AATCGATAGATAAGGA",6,110.1,8.6,-2.17,0.11,2.31,1.16,0,">1 nonsynonymous","S19M Y119S",2
"lib1","SARS-CoV-2","AATCGATATTGATGCA",6,76.56,7.5,-3.27,0.17,1.5,1.09,0.01,"1 nonsynonymous","C150P",1
"lib1","SARS-CoV-2","AATCGATGGTGAAACA",6,77.62,10.8,0.03,0.07,2.92,1.04,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","AATCGATTATTCAAAG",2,7.79,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","W23F T85E L131V Y175L",4
"lib1","SARS-CoV-2","AATCGATTTTTTAGAA",5,98.31,8.18,-2.59,0.18,1.66,1.18,0.01,">1 nonsynonymous","Y91S P169G",2
"lib1","SARS-CoV-2","AATCGCAACGACATCA",6,65.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L95P N107M L125Y V153R",4
"lib1","SARS-CoV-2","AATCGCAATAGCCTAC",2,26,10.18,-0.58,0.1,2.85,1.01,0,">1 nonsynonymous","A33M G174T",2
"lib1","SARS-CoV-2","AATCGCACCCTCCAAT",2,81.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N1S C150S T170H",3
"lib1","SARS-CoV-2","AATCGCAGCCCTAATG",3,26.25,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","V11F N92T",2
"lib1","SARS-CoV-2","AATCGCAGTGCCATAA",13,3.31,NA,NA,NA,NA,NA,NA,"stop","L38* S45V T193S",3
"lib1","SARS-CoV-2","AATCGCAGTTGATTTC",3,59.06,10.87,0.11,0.06,2.93,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AATCGCATATTATATA",1,1.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N130S",1
"lib1","SARS-CoV-2","AATCGCATGACGCAGA",5,36.78,6.41,-4.35,0.95,1.5,1.21,0.05,">1 nonsynonymous","W23K D97L E135V",3
"lib1","SARS-CoV-2","AATCGCCAACATACAA",2,20.51,9.59,-1.17,0.26,1.54,1.12,0.04,">1 nonsynonymous","F17P D98H",2
"lib1","SARS-CoV-2","AATCGCCACGCCAAAA",10,80.65,10.69,-0.07,0.05,2.89,1.06,0,"1 nonsynonymous","S36I",1
"lib1","SARS-CoV-2","AATCGCCAGGTAAAAG",10,99.1,8.7,-2.06,0.14,1.5,1.15,0.01,">1 nonsynonymous","S45Y T63N K87F A105N N130F",5
"lib1","SARS-CoV-2","AATCGCCATAGATTAT",24,330.12,10.14,-0.62,0.04,2.87,1.02,0,">1 nonsynonymous","A42S K87A",2
"lib1","SARS-CoV-2","AATCGCCCACGCTAAG",4,14.21,9.32,-1.45,0.29,2.03,1.3,0.08,"1 nonsynonymous","S108M",1
"lib1","SARS-CoV-2","AATCGCCGGGAGCTTA",3,6.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C49S T85P F156V K199N",4
"lib1","SARS-CoV-2","AATCGCCTAAAGGTAA",3,48.41,10.25,-0.52,0.08,2.48,1.04,0,"1 nonsynonymous","G51L",1
"lib1","SARS-CoV-2","AATCGCCTATAGTAGA",3,0,NA,NA,NA,NA,NA,NA,"stop","P7K T15N K56L I88E N118*",5
"lib1","SARS-CoV-2","AATCGCCTGTGTCCTG",1,0.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","AATCGCGACTATCGTT",8,83.6,10.41,-0.35,0.05,2.85,1.02,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","AATCGCGATATGCGTG",6,0.59,NA,NA,NA,NA,NA,NA,"stop","G9* F99D",2
"lib1","SARS-CoV-2","AATCGCGTTAAAATAT",7,98.93,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","K128V P169A V173T P177Y",4
"lib1","SARS-CoV-2","AATCGCTATCCAACTA",2,34.13,6.05,-4.71,0.78,1.5,1.14,0.01,">1 nonsynonymous","R25V Y123N K128L",3
"lib1","SARS-CoV-2","AATCGCTCATGAGGGC",2,17.99,6.2,-4.56,0.99,1.68,1.19,0.03,">1 nonsynonymous","P96R Y143Q H189N",3
"lib1","SARS-CoV-2","AATCGCTCCAACACGT",5,63.19,6,-4.76,0.85,1.5,1.14,0.01,">1 nonsynonymous","S19L S45W Y175K",3
"lib1","SARS-CoV-2","AATCGCTGAAAAGTAT",4,13.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92E Y121V A145L",3
"lib1","SARS-CoV-2","AATCGCTGTGGCACAT",2,0.72,NA,NA,NA,NA,NA,NA,"stop","S36* S45K Y165L",3
"lib1","SARS-CoV-2","AATCGCTTGATAGCTG",3,44.46,9.53,-1.24,0.18,1.73,1.13,0.01,">1 nonsynonymous","K56S P82T",2
"lib1","SARS-CoV-2","AATCGGAGTACCCATA",7,36.08,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F44M K94D N151K",3
"lib1","SARS-CoV-2","AATCGGCAAAAACCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* R136* P161L",3
"lib1","SARS-CoV-2","AATCGGGCATTAACTC",5,149.74,10.83,0.06,0.08,2.93,1.04,0,">1 nonsynonymous","P54I Q84S",2
"lib1","SARS-CoV-2","AATCGGGGCTGGCATG",3,29,9.14,-1.62,0.11,2.77,1.04,0.01,">1 nonsynonymous","L131V Q168C",2
"lib1","SARS-CoV-2","AATCGGGTAGACAATT",1,89.08,10.84,0.08,0.09,2.94,1.02,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","AATCGGTTTCTAGGCA",10,66.58,8.34,-2.42,0.13,1.8,1.09,0.01,"1 nonsynonymous","Y165P",1
"lib1","SARS-CoV-2","AATCGTAAACAATGTA",3,41.14,6,-4.76,2,3,1.2,0,">1 nonsynonymous","N64L I88M L95T D112T",4
"lib1","SARS-CoV-2","AATCGTAATGTCGAAA",4,197.76,10.62,-0.15,0.03,2.97,1.01,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","AATCGTACATTCTATA",3,122.7,10,-0.76,0.06,2.76,1.04,0,">1 nonsynonymous","T100I N107K",2
"lib1","SARS-CoV-2","AATCGTACATTTATGA",4,89.64,10.74,-0.03,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCGTACCAAGGTCA",8,27.05,7.54,-3.23,0.46,1.5,1.02,0.07,">1 nonsynonymous","N4R C61T W106N L131P T201A",5
"lib1","SARS-CoV-2","AATCGTACCTAGCGGT",5,115.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25W S139K Y175G",3
"lib1","SARS-CoV-2","AATCGTACGAAACCAA",5,25.2,6.09,-4.67,0.52,1.5,1.17,0.01,">1 nonsynonymous","V20H F62L I88R K94V",4
"lib1","SARS-CoV-2","AATCGTAGCCTGCATT",8,144.22,10.77,0,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCGTATATAGTACC",4,27.08,8.74,-2.03,0.35,1.64,1.21,0.04,">1 nonsynonymous","A18Y D112V P169H",3
"lib1","SARS-CoV-2","AATCGTATTAACAGGT",1,53.44,10.49,-0.27,0.06,2.87,1,0,"1 nonsynonymous","Y66A",1
"lib1","SARS-CoV-2","AATCGTATTCCAAGAT",2,13.68,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G51S D90P S147T L162S R179L",5
"lib1","SARS-CoV-2","AATCGTCACACCGAAG",6,18.38,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F99C A105G N120I P133A F156R",5
"lib1","SARS-CoV-2","AATCGTCCCTGACTAC",2,69.99,10.34,-0.42,0.04,2.94,1.02,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","AATCGTCCTAACATGT",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32G D59V L122C G146C T170R",5
"lib1","SARS-CoV-2","AATCGTCCTTTAAAAT",8,205.63,9.6,-1.16,0.04,2.79,1.07,0,">1 nonsynonymous","D97S Y119S",2
"lib1","SARS-CoV-2","AATCGTCGAATTACCA",2,31.1,10.43,-0.34,0.05,2.85,1.11,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","AATCGTCTTATGTCTT",11,186.59,10.78,0.02,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCGTGACTTTTCCA",2,13.01,6.64,-4.12,0.41,2.16,1.04,0.02,">1 nonsynonymous","C61Y G172T V182R",3
"lib1","SARS-CoV-2","AATCGTGCTCCGCCAA",1,65.62,8.44,-2.32,0.18,1.84,1.12,0.01,">1 nonsynonymous","N4T N107V L125F",3
"lib1","SARS-CoV-2","AATCGTGTTATTACGG",7,21.05,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","L57H Q79V Y119D",3
"lib1","SARS-CoV-2","AATCGTTAGACATCCG",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G Y50C I104E Y123K S200W",5
"lib1","SARS-CoV-2","AATCGTTAGTGACGCG",1,30.95,10.77,0.01,0.13,2.93,1.02,0.01,">1 nonsynonymous","N1R A42D T55H T148K",4
"lib1","SARS-CoV-2","AATCGTTCCAACTCCA",8,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R V153R P197R",3
"lib1","SARS-CoV-2","AATCGTTCTACGTTAT",5,158.47,9.12,-1.64,0.11,2.21,1.07,0,">1 nonsynonymous","T15G S43A C61G K87G",4
"lib1","SARS-CoV-2","AATCGTTGAAGTTGCG",6,5.13,NA,NA,NA,NA,NA,NA,"stop","N118K Q176*",2
"lib1","SARS-CoV-2","AATCGTTGACCTACTT",1,8.45,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","C49L G86E N107S",3
"lib1","SARS-CoV-2","AATCGTTGATAACACG",1,0.6,NA,NA,NA,NA,NA,NA,"stop","P96T R136*",2
"lib1","SARS-CoV-2","AATCGTTGCTAACTAT",5,37.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W106E Y119L",2
"lib1","SARS-CoV-2","AATCGTTGGGTTTAAC",3,12.31,10.02,-0.75,0.17,2.05,1.07,0.01,">1 nonsynonymous","V37R L57Y V153Y",3
"lib1","SARS-CoV-2","AATCGTTTAAAGATTA",4,55.58,8.02,-2.74,0.17,1.56,1.1,0.01,">1 nonsynonymous","R73K S129F Y143C",3
"lib1","SARS-CoV-2","AATCGTTTACAAGACG",6,198.43,10.68,-0.08,0.06,2.92,1.04,0,">1 nonsynonymous","C61A D97R",2
"lib1","SARS-CoV-2","AATCGTTTGTCGGACT",1,8.07,8.45,-2.32,0.23,2.66,1.09,0.02,">1 nonsynonymous","T85N S113N",2
"lib1","SARS-CoV-2","AATCTAAAAAGTTGCT",13,135.07,10.81,0.05,0.06,2.93,1.04,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","AATCTAAAAATGCCTA",2,6.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44C K94H P149V G152V P161Y",5
"lib1","SARS-CoV-2","AATCTAAAACCCATAA",2,16.5,10.83,0.07,0.06,2.9,1.03,0,">1 nonsynonymous","N4S S41E T55G",3
"lib1","SARS-CoV-2","AATCTAAAACTAAGTA",1,5.11,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","G83I W106Q D112V E154G",4
"lib1","SARS-CoV-2","AATCTAAAATTCAGCA",1,45.26,10.85,0.09,0.03,2.97,1.01,0,"1 nonsynonymous","A33W",1
"lib1","SARS-CoV-2","AATCTAAACTACGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","R27E D59* P82I S139K F167I Y175*",6
"lib1","SARS-CoV-2","AATCTAAACTTTAGCT",2,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T V103N",2
"lib1","SARS-CoV-2","AATCTAAAGCGTGATA",4,126.99,6.01,-4.75,0.95,1.5,1.22,0.02,">1 nonsynonymous","T100C Y119N Y175A",3
"lib1","SARS-CoV-2","AATCTAAATGTGTGCT",12,28.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T15L C49S D59R T63K K94F F134C T201N",7
"lib1","SARS-CoV-2","AATCTAACAGTGCTTT",6,158.44,9.69,-1.07,0.14,1.93,1.08,0.01,">1 nonsynonymous","G9S R27L Y39A T63Q Y123T",5
"lib1","SARS-CoV-2","AATCTAACCCATTATT",12,207.54,10.65,-0.12,0.04,2.93,1.03,0,">1 nonsynonymous","C61A I138T P149L L188V",4
"lib1","SARS-CoV-2","AATCTAACTTGACACG",5,93.84,7.61,-3.16,0.13,2.12,1.17,0.01,">1 nonsynonymous","T148S C158N",2
"lib1","SARS-CoV-2","AATCTAACTTTTTAAA",8,185.28,10.7,-0.06,0.04,2.92,1.03,0,">1 nonsynonymous","R16L V77L",2
"lib1","SARS-CoV-2","AATCTAATAACATATC",3,22.63,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59M Q168G L183S",3
"lib1","SARS-CoV-2","AATCTAATACCGTAGA",1,45.05,10.81,0.04,0.08,2.9,1.03,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","AATCTAATAGGCCTAT",2,54.35,6.45,-4.31,0.52,1.5,1.12,0.03,">1 nonsynonymous","C150H N171I",2
"lib1","SARS-CoV-2","AATCTAATGATAAGAG",1,81.38,10.79,0.03,0.08,2.91,1.03,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","AATCTAATGATGTCAT",4,35.29,9.06,-1.7,0.24,1.5,1.09,0.03,"1 nonsynonymous","D68E",1
"lib1","SARS-CoV-2","AATCTAATGTCATTAT",3,38.18,10.88,0.12,0.07,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AATCTAATTAAAGACC",3,26.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13S R25L G51M Q79W P96C C102T L122D E141G P161Y E186Y K198V",11
"lib1","SARS-CoV-2","AATCTAATTTTGATCA",3,53.04,10.1,-0.66,0.05,2.87,1,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","AATCTACAACTCACAA",4,13.99,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F62Y A89V N92L",3
"lib1","SARS-CoV-2","AATCTACAATTATAGT",4,44.64,8.43,-2.33,0.33,1.82,1.18,0.04,">1 nonsynonymous","S108Y N120K",2
"lib1","SARS-CoV-2","AATCTACACTACTGCC",6,103.09,9.99,-0.77,0.08,2.14,1.06,0,">1 nonsynonymous","K48C D90K T100S T201P",4
"lib1","SARS-CoV-2","AATCTACATAAGGTTA",5,1.41,NA,NA,NA,NA,NA,NA,"stop","F17W A81K T100P S184*",4
"lib1","SARS-CoV-2","AATCTACCAAATCACA",2,12.47,8.72,-2.04,0.17,2.51,1.11,0.02,">1 nonsynonymous","N1L D97R Y119I",3
"lib1","SARS-CoV-2","AATCTACCCGCACATT",6,45.74,7.74,-3.02,0.35,1.5,1.1,0.04,">1 nonsynonymous","K94L D98A",2
"lib1","SARS-CoV-2","AATCTACTAAGCGCTT",2,59.88,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","F44Y F62Q Y91A Y119D K198W",5
"lib1","SARS-CoV-2","AATCTACTGCTAAGCA",6,40.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4W N40E K114L Y165N",4
"lib1","SARS-CoV-2","AATCTACTGTGACAAA",4,2.98,NA,NA,NA,NA,NA,NA,"stop","V37D S45L T85* G101W Y119L K128L C195D",7
"lib1","SARS-CoV-2","AATCTACTTAAACACG",3,9.07,8.14,-2.63,0.23,1.91,1.11,0.04,">1 nonsynonymous","D90I G146T",2
"lib1","SARS-CoV-2","AATCTAGAGCTAAATG",3,33.61,6,-4.76,2,2.93,1.19,0,">1 nonsynonymous","V37I C49V I80L S113R E141H V173T",6
"lib1","SARS-CoV-2","AATCTAGCGATAGCAG",1,13.04,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","V65K N107K F160A",3
"lib1","SARS-CoV-2","AATCTAGCGTAGAAAG",8,19.11,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","I2N C49L G83V A105N Q144S V182A",6
"lib1","SARS-CoV-2","AATCTAGGAATGGAAA",1,6.1,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","I72N G101F S164E",3
"lib1","SARS-CoV-2","AATCTAGGCTCTATTA",4,22.33,6.71,-4.05,0.63,1.5,1.3,0.06,">1 nonsynonymous","L57A D98F Q144M",3
"lib1","SARS-CoV-2","AATCTAGTAATTTATA",1,82.14,10.37,-0.4,0.04,2.96,1,0,"1 nonsynonymous","G174Q",1
"lib1","SARS-CoV-2","AATCTAGTACACCAAA",2,37.54,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16V T63K P149A G152I Q176R",5
"lib1","SARS-CoV-2","AATCTAGTAGAGGAAT",3,33.86,6.13,-4.63,0.27,1.5,1.15,0,">1 nonsynonymous","P82N N109H K128S",3
"lib1","SARS-CoV-2","AATCTAGTAGATGACT",3,10.18,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C61A Y93D",2
"lib1","SARS-CoV-2","AATCTAGTCTAGTCAG",12,140.22,10.19,-0.58,0.06,2.75,1.03,0,">1 nonsynonymous","Y35S F44T",2
"lib1","SARS-CoV-2","AATCTATAAACACGGA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","N4* C49D N64G G155P",4
"lib1","SARS-CoV-2","AATCTATACGCAGCCG",1,1.27,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATCTATATAGCTCAC",3,29.29,6,-4.76,2,3,1.23,0,">1 nonsynonymous","E10T D112S",2
"lib1","SARS-CoV-2","AATCTATCACACAATT",5,120.8,9.55,-1.22,0.1,2.49,1.1,0,">1 nonsynonymous","L38H K87I P133G P197W",4
"lib1","SARS-CoV-2","AATCTATCTATAATGT",5,36.53,10.45,-0.31,0.05,2.83,1.03,0,">1 nonsynonymous","L5W E10L",2
"lib1","SARS-CoV-2","AATCTATGAATATCGA",1,68.75,10.78,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","V37H",1
"lib1","SARS-CoV-2","AATCTATGTATCATTA",4,6.68,9.93,-0.84,0.24,2.27,1.2,0.02,">1 nonsynonymous","R16F E141T",2
"lib1","SARS-CoV-2","AATCTATGTGGTCCCC",1,3.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","AATCTATTCCCTCCAA",5,105.1,10.3,-0.46,0.05,2.82,1.04,0,">1 nonsynonymous","T15R C61K Y178N",3
"lib1","SARS-CoV-2","AATCTATTCCTGATTA",3,51.12,10.61,-0.16,0.03,2.9,1.07,0,">1 nonsynonymous","S43K C61K S184D K199T",4
"lib1","SARS-CoV-2","AATCTCAAACTAGAAA",1,20.34,10.65,-0.12,0.09,2.83,1.12,0.01,"1 nonsynonymous","N110M",1
"lib1","SARS-CoV-2","AATCTCAAATACTTTG",6,52.5,10.66,-0.11,0.05,2.87,1.04,0,">1 nonsynonymous","T3A N120M F160Q",3
"lib1","SARS-CoV-2","AATCTCAAATGGATAT",2,55.61,10.71,-0.05,0.07,2.93,1.05,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","AATCTCAAGCTACTAT",2,30.02,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V65R A89K",2
"lib1","SARS-CoV-2","AATCTCAAGTTTCTAT",2,9.46,6.01,-4.75,0.99,1.5,1.16,0.02,">1 nonsynonymous","Y39L T55Q G83T R127L K199N",5
"lib1","SARS-CoV-2","AATCTCAATACACTAG",4,47.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N24I N107R N120G C158V",4
"lib1","SARS-CoV-2","AATCTCACAATCGTGG",1,41.21,10.6,-0.17,0.05,2.79,1.03,0,">1 nonsynonymous","P54I Q79F",2
"lib1","SARS-CoV-2","AATCTCACATTGGACT",3,47.31,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P82N F99S R136E R179K",4
"lib1","SARS-CoV-2","AATCTCACGAACTGTG",6,27.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6G N58Q A89V I104Y G116S",5
"lib1","SARS-CoV-2","AATCTCACTGCGATTA",5,52.51,8.45,-2.31,0.43,1.5,1.01,0.06,">1 nonsynonymous","Y35M S43D G86R",3
"lib1","SARS-CoV-2","AATCTCAGACATTCCA",6,71.04,9.93,-0.84,0.09,2.46,1.02,0,">1 nonsynonymous","V37N A105I",2
"lib1","SARS-CoV-2","AATCTCAGCACAGCGA",2,17.94,10.51,-0.25,0.07,2.93,1.06,0,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","AATCTCAGGACCAGTG",12,67.09,7.7,-3.06,0.32,1.5,1.15,0.04,">1 nonsynonymous","T3Y P82F",2
"lib1","SARS-CoV-2","AATCTCATACTTATGT",5,66.74,10.79,0.02,0.06,2.98,1,0,"1 nonsynonymous","L5D",1
"lib1","SARS-CoV-2","AATCTCATAGTATAGT",7,37.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45H I72M Y119I",3
"lib1","SARS-CoV-2","AATCTCATCACAACCC",2,31.08,10.36,-0.41,0.06,2.86,1.03,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","AATCTCATGTTCCTGG",1,7.3,9,-1.77,0.35,1.76,1.17,0.04,">1 nonsynonymous","D59G Y91T",2
"lib1","SARS-CoV-2","AATCTCATTACCATTA",2,36.47,6.67,-4.09,0.63,1.5,1.31,0.05,">1 nonsynonymous","C6K A22V C61L",3
"lib1","SARS-CoV-2","AATCTCATTAGCACAA",1,13.7,7.03,-3.74,0.47,1.62,1.24,0.06,">1 nonsynonymous","F47I T55S T85I Y121C R136Y N171W",6
"lib1","SARS-CoV-2","AATCTCCCGATAACCT",5,11.26,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37L C49M V103P S139I F167L",5
"lib1","SARS-CoV-2","AATCTCCCTGAAGAGT",8,51.04,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R16Y R25P D97C N120M R127V I138A",6
"lib1","SARS-CoV-2","AATCTCCGCGAGAACT",8,2.17,NA,NA,NA,NA,NA,NA,"stop","K87E D137F C158*",3
"lib1","SARS-CoV-2","AATCTCCGTTAGATAT",5,150.85,8.7,-2.06,0.1,2.92,1.08,0,">1 nonsynonymous","L125H F156A",2
"lib1","SARS-CoV-2","AATCTCCTTTAGCCCA",3,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M N13P N58Q G116T E154I",5
"lib1","SARS-CoV-2","AATCTCGAAAACGGCT",1,161.38,10.52,-0.25,0.04,2.9,1.03,0,">1 nonsynonymous","V37D Q168H Y178I",3
"lib1","SARS-CoV-2","AATCTCGACACTAAGG",4,78.21,10.8,0.03,0.06,2.91,1.05,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","AATCTCGATAGAAGTT",7,172.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N64D T85M Q176Y",3
"lib1","SARS-CoV-2","AATCTCGATGCTAGAA",6,285.21,8.47,-2.29,0.41,1.5,1,0.07,">1 nonsynonymous","V32G V103W R124P",3
"lib1","SARS-CoV-2","AATCTCGCTCATTGAA",1,37.58,10.77,0.01,0.04,2.86,1.09,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","AATCTCGGATTCTTCC",3,43.36,6.14,-4.63,0.64,1.5,1.16,0.01,">1 nonsynonymous","R78P Y143P",2
"lib1","SARS-CoV-2","AATCTCGTCTGTGCTA",9,125.99,10.73,-0.04,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCTCTAAAATGATA",4,102.86,10.25,-0.52,0.07,2.65,1.04,0,">1 nonsynonymous","I2P R136N",2
"lib1","SARS-CoV-2","AATCTCTTACAGCACG",7,78.91,6.54,-4.22,0.33,1.5,1.16,0.01,">1 nonsynonymous","V103Y N107R S129N P161L Q176V",5
"lib1","SARS-CoV-2","AATCTCTTGGAACCGG",1,9.02,10.84,0.07,0.11,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCTGACAACGCCAA",3,28.66,10.84,0.08,0.07,2.96,1,0,"1 nonsynonymous","Q84V",1
"lib1","SARS-CoV-2","AATCTGACCAGAACGG",1,11.17,9.24,-1.52,0.28,1.58,1.14,0.04,"1 nonsynonymous","D68E",1
"lib1","SARS-CoV-2","AATCTGAGAAACAAAT",3,17.06,8.42,-2.34,0.08,2.52,1.09,0,">1 nonsynonymous","K56E N107L K132M",3
"lib1","SARS-CoV-2","AATCTGAGAGACGACC",2,17.35,10.68,-0.09,0.08,3,1,0,">1 nonsynonymous","T55G N64S",2
"lib1","SARS-CoV-2","AATCTGAGTAATTCTC",8,117.41,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","R78C G83N W106K D137C T201N",5
"lib1","SARS-CoV-2","AATCTGATTGATGACA",6,2.33,NA,NA,NA,NA,NA,NA,"stop","P96I V103T N107* Y119H T201G",5
"lib1","SARS-CoV-2","AATCTGCAAAATTACC",1,5.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R R136S",2
"lib1","SARS-CoV-2","AATCTGCAATATCGCT",5,2.78,NA,NA,NA,NA,NA,NA,"stop","L5W E10Q T15Y N24S F62* P96H G116S",7
"lib1","SARS-CoV-2","AATCTGCCAAGTTCAC",3,0.25,NA,NA,NA,NA,NA,NA,"stop","L38A D59G T85V P149G T201*",5
"lib1","SARS-CoV-2","AATCTGCCACACTATA",1,8.95,10.62,-0.14,0.06,2.95,1.01,0,">1 nonsynonymous","V11I K132L Y178M",3
"lib1","SARS-CoV-2","AATCTGCTAATACTTA",7,84.19,7.96,-2.8,0.17,2.01,1.16,0.01,"1 nonsynonymous","C158A",1
"lib1","SARS-CoV-2","AATCTGCTTCAACACA",5,56.45,9.81,-0.96,0.12,2.11,1.08,0.01,">1 nonsynonymous","N30R G83T",2
"lib1","SARS-CoV-2","AATCTGGACACTAAAG",3,39.33,10.67,-0.1,0.06,2.95,1.03,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","AATCTGGAGTAGAAGT",3,45.98,9.27,-1.5,0.18,1.74,1.14,0.02,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","AATCTGGATGGCTATA",1,2.01,NA,NA,NA,NA,NA,NA,"stop","C6A A14T F62P G86* R124I I138L F160K T201V",8
"lib1","SARS-CoV-2","AATCTGGTAACCTTGG",4,30.48,9.86,-0.91,0.17,2.57,1,0.01,">1 nonsynonymous","N107A I142M",2
"lib1","SARS-CoV-2","AATCTGGTCAACCAAT",3,55.67,8.85,-1.91,0.29,1.5,1.01,0.04,">1 nonsynonymous","W106K T140I Y178M",3
"lib1","SARS-CoV-2","AATCTGGTGTTTGCAA",2,57.27,10.47,-0.29,0.06,2.89,1.08,0,">1 nonsynonymous","G83R K132F",2
"lib1","SARS-CoV-2","AATCTGTAAATGATTC",6,112.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D59T N107M N120S D137Y Y165H",5
"lib1","SARS-CoV-2","AATCTGTACAAATACG",4,76.74,10.76,-0.01,0.03,2.93,1.03,0,">1 nonsynonymous","S129D E141Q",2
"lib1","SARS-CoV-2","AATCTGTCTACACTAG",2,11.08,10.86,0.1,0.09,2.96,1,0,">1 nonsynonymous","Y39R T100H K199I",3
"lib1","SARS-CoV-2","AATCTGTGAGATGACC",6,107.57,10.65,-0.12,0.04,2.95,1.04,0,"1 nonsynonymous","Y21F",1
"lib1","SARS-CoV-2","AATCTGTTTACCCATA",1,46.38,7.05,-3.71,0.31,1.5,1.09,0.02,">1 nonsynonymous","T15P C150V",2
"lib1","SARS-CoV-2","AATCTTAAAACCATTT",1,13.26,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G83C F99S",2
"lib1","SARS-CoV-2","AATCTTAAAGGATTAG",2,60.38,10.83,0.07,0.07,2.9,1.06,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","AATCTTAAAGTCTAGG",3,0.49,NA,NA,NA,NA,NA,NA,"stop","G83* P133V",2
"lib1","SARS-CoV-2","AATCTTAAATCTGCAA",2,20.08,9.09,-1.67,0.23,1.56,1.09,0.03,">1 nonsynonymous","N64A G86K",2
"lib1","SARS-CoV-2","AATCTTAATTTCTGAA",2,25.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37G P82N D97R N109K N118D",5
"lib1","SARS-CoV-2","AATCTTAATTTGCCCA",2,35.99,8.78,-1.99,0.08,1.83,1.09,0,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","AATCTTACAAACGGAG",2,10.28,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","AATCTTACCGCTGGAA",2,8.23,10.71,-0.05,0.07,2.82,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCTTACGTGAAAAC",2,45.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8I S36L C61S G83T N107T",5
"lib1","SARS-CoV-2","AATCTTACTGCTCCCA",5,97,10.14,-0.63,0.08,2.79,1.04,0,">1 nonsynonymous","S41C Y178V",2
"lib1","SARS-CoV-2","AATCTTAGCGCATACG",3,23.89,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T63W R124N",2
"lib1","SARS-CoV-2","AATCTTAGCTATAAAA",6,34.94,9.54,-1.22,0.15,1.69,1.25,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","AATCTTAGTTGAGGAA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib1","SARS-CoV-2","AATCTTATCTACGAGA",7,21.21,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P82L L95T N118Y",3
"lib1","SARS-CoV-2","AATCTTATTAAAAGAA",2,20.49,6.84,-3.92,0.39,1.5,1.05,0.05,">1 nonsynonymous","T3S G74L Y123L V182G",4
"lib1","SARS-CoV-2","AATCTTATTTCGTTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* A105E Y119A",3
"lib1","SARS-CoV-2","AATCTTCAGAATAAAA",1,12.55,7.49,-3.28,0.56,1.5,1.14,0.07,">1 nonsynonymous","I104N C150Y",2
"lib1","SARS-CoV-2","AATCTTCATCTACTCA",2,16.52,10.23,-0.53,0.12,2.44,1.04,0.01,">1 nonsynonymous","R16I G83V",2
"lib1","SARS-CoV-2","AATCTTCCAAAAACTT",5,44.15,6,-4.76,2,1.63,1.16,0.01,">1 nonsynonymous","L5N F12A R73V",3
"lib1","SARS-CoV-2","AATCTTCCAGACATGT",1,7.84,10.32,-0.44,0.13,2.9,1.02,0.01,"1 nonsynonymous","A81C",1
"lib1","SARS-CoV-2","AATCTTCCAGCCTTCA",6,23.68,9.97,-0.79,0.1,2.14,1.04,0,">1 nonsynonymous","N13M N40Y",2
"lib1","SARS-CoV-2","AATCTTCCATACAGAG",1,21.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P54V N92L",2
"lib1","SARS-CoV-2","AATCTTCCCTCTACTG",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I R16T F99K P149L",4
"lib1","SARS-CoV-2","AATCTTCGCAGTCCTA",2,19.97,10.82,0.06,0.12,2.85,1.01,0.01,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","AATCTTCTAAGAAAAA",3,88.94,10.84,0.07,0.07,2.87,1.09,0,">1 nonsynonymous","T63H L122Q",2
"lib1","SARS-CoV-2","AATCTTCTCATTCCTG",2,13.44,8.64,-2.13,0.24,1.5,1.25,0.03,">1 nonsynonymous","C6R N40Y T100R",3
"lib1","SARS-CoV-2","AATCTTGAACGATGAC",5,14.59,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D98L A105G N130G S164I",4
"lib1","SARS-CoV-2","AATCTTGAGGCTACGC",4,8.17,NA,NA,NA,NA,NA,NA,"stop","N40M P54* K128L",3
"lib1","SARS-CoV-2","AATCTTGATTCACAAT",1,9.33,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S69L N92T",2
"lib1","SARS-CoV-2","AATCTTGCATCAAGCA",8,281.38,10.33,-0.43,0.03,2.91,1.03,0,">1 nonsynonymous","Y39K K48C",2
"lib1","SARS-CoV-2","AATCTTGGACACTTCT",5,60.43,10.61,-0.16,0.08,2.86,1.01,0,"1 nonsynonymous","G9I",1
"lib1","SARS-CoV-2","AATCTTGGGGAAGGGC",7,81.31,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9Y A14T L38G D68A G86I Y143V A190K",7
"lib1","SARS-CoV-2","AATCTTGGTGAAATTC",4,40.36,9.18,-1.59,0.26,1.5,1.04,0.03,">1 nonsynonymous","G9L P54R P96D G152H",4
"lib1","SARS-CoV-2","AATCTTTACCATACCA",3,25.45,10.71,-0.05,0.05,2.93,1.01,0,">1 nonsynonymous","L5I Q163I S200V",3
"lib1","SARS-CoV-2","AATCTTTCCAATAGAG",1,10.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V71W P82I V173W",3
"lib1","SARS-CoV-2","AATCTTTCTGAATCGA",7,2.57,NA,NA,NA,NA,NA,NA,"stop","I2M N40L Q79E G86P N120*",5
"lib1","SARS-CoV-2","AATCTTTGCGAATCCC",5,10.83,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3A G83L D137L",3
"lib1","SARS-CoV-2","AATCTTTTCGCACTAT",5,185.16,9.91,-0.85,0.03,2.93,1.01,0,">1 nonsynonymous","S36E R73S P149R",3
"lib1","SARS-CoV-2","AATCTTTTGGCATAAA",2,67.7,10.9,0.13,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATCTTTTTGTTACCG",5,57.79,10.77,0.01,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGAAAAAAGTTATT",2,93.03,10.69,-0.07,0.06,2.9,1.06,0,">1 nonsynonymous","R16Y Y35F Q84L Y143F",4
"lib1","SARS-CoV-2","AATGAAAAACAAGACG",3,30.45,10.09,-0.68,0.35,1.5,1,0.07,">1 nonsynonymous","P54I S69W K94V",3
"lib1","SARS-CoV-2","AATGAAAAAGAAAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","F12V T55N V115R F160C Q168*",5
"lib1","SARS-CoV-2","AATGAAAAAGTCATAG",1,24.01,10.83,0.07,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGAAAAATACTATG",5,84.72,9.5,-1.26,0.05,2.87,1.05,0,">1 nonsynonymous","K87I P149S Q168T",3
"lib1","SARS-CoV-2","AATGAAAAGCATTGTA",4,9.92,9.48,-1.28,0.31,2.13,1.04,0.03,">1 nonsynonymous","A14K D97I A105Y",3
"lib1","SARS-CoV-2","AATGAAAAGTTACAAT",11,6.93,NA,NA,NA,NA,NA,NA,"stop","C6V N30* Y39K N92P N110D K199L",6
"lib1","SARS-CoV-2","AATGAAAATAAACAAC",2,14.92,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","G146E P161T",2
"lib1","SARS-CoV-2","AATGAAAATAATATGA",3,26.71,6,-4.76,1.55,1.5,1.19,0.03,">1 nonsynonymous","W23M F99T S113K",3
"lib1","SARS-CoV-2","AATGAAAATCGGATTA",4,69.61,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I72Y R136S P149C P161L",4
"lib1","SARS-CoV-2","AATGAAAATTAAGTTT",2,0.84,NA,NA,NA,NA,NA,NA,"stop","I28W S43* N118D S129R",4
"lib1","SARS-CoV-2","AATGAAACAAAGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","R25E T63F T85D Y119* K199I",5
"lib1","SARS-CoV-2","AATGAAACAACAAACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","AATGAAACCGTCTAAA",2,20.37,10.33,-0.44,0.04,2.88,1.04,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","AATGAAACCTAGCAAG",7,27.06,6.54,-4.22,0.61,1.5,1.24,0.04,">1 nonsynonymous","F44A F99D Y121L T201S",4
"lib1","SARS-CoV-2","AATGAAACCTTACAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K T148E",2
"lib1","SARS-CoV-2","AATGAAACGAAGCAAC",2,41.71,7.86,-2.91,0.19,2.12,1.18,0.01,">1 nonsynonymous","A33T N171D",2
"lib1","SARS-CoV-2","AATGAAACTGAGATCC",3,27.12,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","Q144Y Y165D",2
"lib1","SARS-CoV-2","AATGAAAGACCCCAAA",6,52.33,10.43,-0.33,0.09,2.72,1.09,0,"1 nonsynonymous","P7F",1
"lib1","SARS-CoV-2","AATGAAAGCATTCCGC",3,24.61,10.01,-0.76,0.19,2.11,1.06,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","AATGAAAGCCATTAAT",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K R127E G166C",3
"lib1","SARS-CoV-2","AATGAAAGCGTGAAAC",1,39.59,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F62R S147K P177V",3
"lib1","SARS-CoV-2","AATGAAAGGTATATGC",9,105.73,9.75,-1.02,0.12,2.07,1.07,0.01,">1 nonsynonymous","F44G A89C D97L",3
"lib1","SARS-CoV-2","AATGAAAGGTCCGTAC",2,15.14,10.22,-0.55,0.07,2.77,1.05,0,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","AATGAAATATGTCCAT",11,76.73,10.7,-0.07,0.07,2.82,1.09,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","AATGAAATCCCCATCA",6,46.32,8.74,-2.02,0.15,1.65,1.14,0.01,">1 nonsynonymous","P7Y Y35M P96L",3
"lib1","SARS-CoV-2","AATGAAATGATCAATA",4,1.19,NA,NA,NA,NA,NA,NA,"stop","D34N P82* K132F",3
"lib1","SARS-CoV-2","AATGAAATGTTTAGTG",1,24.15,10.03,-0.73,0.13,1.87,1.08,0.01,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","AATGAAATTGCGAGGA",6,51.01,10.78,0.02,0.06,2.93,1.02,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","AATGAACAGACTAGCC",2,1.97,NA,NA,NA,NA,NA,NA,"stop","G9K D97S V103* G174N",4
"lib1","SARS-CoV-2","AATGAACCATCAAAAA",4,40.02,10.14,-0.62,0.06,2.92,1,0,"1 nonsynonymous","Y91W",1
"lib1","SARS-CoV-2","AATGAACCCGAGTGGA",4,0.92,NA,NA,NA,NA,NA,NA,"stop","G9S I28K F62* V103C A190E",5
"lib1","SARS-CoV-2","AATGAACCGTAGAGTT",1,5.03,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","T85M G101A S113L R124W",4
"lib1","SARS-CoV-2","AATGAACCGTATCCCC",4,45.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C31R V37Y N64A G83T F160L G166Y",6
"lib1","SARS-CoV-2","AATGAACCTATGTTTG",3,114.27,9.16,-1.6,0.06,2.67,1.14,0,">1 nonsynonymous","K56I G117A K128S",3
"lib1","SARS-CoV-2","AATGAACGCAAGGTTA",6,108.08,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2M N30L D90T D98N Y119A T140E P161R P177Q",8
"lib1","SARS-CoV-2","AATGAACGTACCTTCC",6,229.45,10.73,-0.03,0.07,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AATGAACTAAAGTCTA",3,92.91,9.21,-1.56,0.05,2.74,1.13,0,">1 nonsynonymous","G146T P169R",2
"lib1","SARS-CoV-2","AATGAACTTAAGACGC",1,31.5,10.44,-0.33,0.07,2.95,1.02,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","AATGAACTTAGTATGG",6,24.13,6.76,-4.01,0.51,1.5,1.03,0.05,">1 nonsynonymous","N13A K56Y G86T",3
"lib1","SARS-CoV-2","AATGAAGAACATCATA",4,147.72,8.37,-2.4,0.12,2.73,1.1,0,">1 nonsynonymous","S36L Y175S",2
"lib1","SARS-CoV-2","AATGAAGAAGACTTTC",1,19.22,10.89,0.13,0.12,2.84,1.08,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AATGAAGAATGTACTT",3,30.23,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","P7R T63R V180R",3
"lib1","SARS-CoV-2","AATGAAGACCAACTCT",5,38.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77K R179G",2
"lib1","SARS-CoV-2","AATGAAGACGCTGGGC",3,26.89,7.87,-2.9,0.42,1.5,1,0.05,">1 nonsynonymous","T55N D68R",2
"lib1","SARS-CoV-2","AATGAAGATAAACCAT",2,14.2,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C61S G172I",2
"lib1","SARS-CoV-2","AATGAAGATGATAAAT",4,37.94,8.58,-2.19,0.14,1.67,1.23,0.01,">1 nonsynonymous","S36M S41C G51E V115D T201L",5
"lib1","SARS-CoV-2","AATGAAGCACACGTTA",3,12.46,9.5,-1.27,0.12,1.9,1.04,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","AATGAAGCTAACAACG",8,28.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24P A33V D59G C102I G155H F160A",6
"lib1","SARS-CoV-2","AATGAAGGAAAGCTTA",1,19.67,9.95,-0.81,0.34,1.5,1,0.08,"1 nonsynonymous","D137G",1
"lib1","SARS-CoV-2","AATGAAGGATAAAATT",2,39.48,10.73,-0.04,0.06,2.88,1.09,0,">1 nonsynonymous","Y35V S45N",2
"lib1","SARS-CoV-2","AATGAAGGGAGTCACG",6,151.56,6,-4.76,1.15,1.5,1.19,0.01,">1 nonsynonymous","Q144G G172P",2
"lib1","SARS-CoV-2","AATGAAGGGCCACCCT",5,11.22,6.13,-4.64,0.67,1.5,1.06,0.05,">1 nonsynonymous","A33P P82F D97G V181N",4
"lib1","SARS-CoV-2","AATGAAGGTAACCTGA",5,174.82,9.22,-1.55,0.07,2.74,1.12,0,">1 nonsynonymous","F126L T140S T170M",3
"lib1","SARS-CoV-2","AATGAAGGTACTTTGT",5,28.6,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L95Q A105V G174E",3
"lib1","SARS-CoV-2","AATGAAGGTTATTATA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F44A F99V N107* K114M E135P P149M T201G",7
"lib1","SARS-CoV-2","AATGAAGTAGAATATA",3,18.19,9.71,-1.05,0.33,1.5,1,0.05,">1 nonsynonymous","N1W T46G D97R",3
"lib1","SARS-CoV-2","AATGAAGTGAAAAATA",2,20.69,7.21,-3.55,0.28,1.5,1.11,0.02,">1 nonsynonymous","R16D L60M L131K",3
"lib1","SARS-CoV-2","AATGAAGTGACAAACG",7,183.01,9.06,-1.71,0.07,2.62,1.13,0,">1 nonsynonymous","A105S F156V Q176M",3
"lib1","SARS-CoV-2","AATGAATAAAACTATC",2,86.35,10.73,-0.03,0.06,2.9,1.05,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","AATGAATAAAATACTT",2,22.98,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","K48V C61A D90M Q163P",4
"lib1","SARS-CoV-2","AATGAATAACAGCTAA",7,21.41,10.55,-0.22,0.07,2.77,1.18,0,">1 nonsynonymous","G51R C61P",2
"lib1","SARS-CoV-2","AATGAATAAGCGTACC",3,34.43,8.39,-2.38,0.18,2.32,1.12,0.01,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","AATGAATAATTCATTG",2,10.57,6,-4.76,1.12,3,1.14,0.01,">1 nonsynonymous","N1S P54R I72K P149H",4
"lib1","SARS-CoV-2","AATGAATACAATGTAA",2,52.89,8.6,-2.16,0.19,1.53,1.08,0.01,">1 nonsynonymous","L5I Y21S V37M P133G G152S",5
"lib1","SARS-CoV-2","AATGAATAGAATGCGA",3,58.45,10.55,-0.21,0.05,2.94,1.03,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","AATGAATAGCTAGAAG",5,47.07,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I2P Y21V S113R C158S P169K",5
"lib1","SARS-CoV-2","AATGAATCCTGTAAAG",3,48.33,8.43,-2.33,0.17,1.5,1.18,0.01,">1 nonsynonymous","F12C F160I",2
"lib1","SARS-CoV-2","AATGAATCCTTATAGA",1,24.12,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A81L D98G S129F S139C",4
"lib1","SARS-CoV-2","AATGAATCGAACATAA",2,11.82,10.73,-0.03,0.07,2.98,1.02,0,"1 nonsynonymous","L122I",1
"lib1","SARS-CoV-2","AATGAATCGCACGAAA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","R16I I28T D59L V71* N120R E141D G166F N171T",8
"lib1","SARS-CoV-2","AATGAATCTAAATAAG",1,8.22,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A22E D112P T201A",3
"lib1","SARS-CoV-2","AATGAATCTGCAATAT",2,23.34,10.49,-0.27,0.04,2.88,1.05,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","AATGAATGAACTGATA",4,0,NA,NA,NA,NA,NA,NA,"stop","S36W T55N L95* N130T T148*",5
"lib1","SARS-CoV-2","AATGAATGATAAGCTA",3,26.46,8.78,-1.99,0.16,1.5,1.11,0.02,">1 nonsynonymous","Y35V S45R E141W P149Q",4
"lib1","SARS-CoV-2","AATGAATGGTCTTACA",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S Y91V C158L L183C",4
"lib1","SARS-CoV-2","AATGAATGTTAATTTT",2,50.98,10.08,-0.68,0.11,2.51,1.05,0.01,">1 nonsynonymous","F44L I138F",2
"lib1","SARS-CoV-2","AATGAATTACCACACG",13,88.8,6,-4.76,2,3,1.15,0,">1 nonsynonymous","W23P N107W",2
"lib1","SARS-CoV-2","AATGAATTATTGAATT",2,30.16,10.73,-0.03,0.08,2.93,1,0,">1 nonsynonymous","P7A S184T",2
"lib1","SARS-CoV-2","AATGACAAAATGAATC",4,1.79,NA,NA,NA,NA,NA,NA,"stop","N58I A105D N110* N157Y",4
"lib1","SARS-CoV-2","AATGACAAACCGGTCC",3,28.11,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L5K R73V P96F W106G Q176E",5
"lib1","SARS-CoV-2","AATGACAAAGGACGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* Y50H G83L V115K",4
"lib1","SARS-CoV-2","AATGACAAGAAAGATT",8,138.42,10.71,-0.05,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGACAATTAGCCGC",4,15.49,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","K87A D112Q P169M",3
"lib1","SARS-CoV-2","AATGACAATTATAACA",2,32.39,8.13,-2.64,0.32,1.5,1.25,0.05,">1 nonsynonymous","K114L S129D E141A V182T",4
"lib1","SARS-CoV-2","AATGACACAGTCAAAC",2,34.6,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R25M G51W Y93I G117N",4
"lib1","SARS-CoV-2","AATGACACATTGAACA",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N W23C G101F",3
"lib1","SARS-CoV-2","AATGACAGACGCTTAT",5,27.42,8.75,-2.02,0.16,1.5,1.12,0.01,">1 nonsynonymous","A18T V65K",2
"lib1","SARS-CoV-2","AATGACAGCGATAACG",3,0.24,NA,NA,NA,NA,NA,NA,"stop","Y50C Y91L W106M Y121S G152* T170I",6
"lib1","SARS-CoV-2","AATGACAGTCAGGATT",1,3.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","AATGACATAGGCCAAT",1,34.74,8.41,-2.35,0.16,1.5,1.09,0.01,">1 nonsynonymous","S19T N107S",2
"lib1","SARS-CoV-2","AATGACATATAGGAAC",11,6.75,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","AATGACATGGATTTCT",6,5.39,NA,NA,NA,NA,NA,NA,"stop","N13P T63* F134T",3
"lib1","SARS-CoV-2","AATGACATGTAAAATT",4,24.81,10.99,0.22,0.09,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGACATTAAACCAG",1,57.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A81T D90M Y143D Y165A Y175N",5
"lib1","SARS-CoV-2","AATGACCACGCGGCAA",4,76.53,10.04,-0.72,0.08,2.49,1.06,0,">1 nonsynonymous","V37L P133I",2
"lib1","SARS-CoV-2","AATGACCAGCCACATA",7,1.38,NA,NA,NA,NA,NA,NA,"stop","R27* A67S",2
"lib1","SARS-CoV-2","AATGACCATAACTACA",2,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N P96S N107K C150S T201Q",5
"lib1","SARS-CoV-2","AATGACCATCGACAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","Q84L T201*",2
"lib1","SARS-CoV-2","AATGACCGGTAAAATT",3,29.33,9.01,-1.75,0.15,2.15,1.16,0.01,">1 nonsynonymous","D112L K128A",2
"lib1","SARS-CoV-2","AATGACCGTGACATAC",4,18.43,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37Q S41Y V103G",3
"lib1","SARS-CoV-2","AATGACCTAAAATTTT",7,75.71,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y39D I88A S139T E154L",4
"lib1","SARS-CoV-2","AATGACCTAGGATTCC",8,103.73,10.72,-0.05,0.08,2.83,1.09,0,">1 nonsynonymous","V37I K128H",2
"lib1","SARS-CoV-2","AATGACCTAGGTATAT",4,35.98,10.65,-0.11,0.12,2.68,1,0,">1 nonsynonymous","A22N G152F",2
"lib1","SARS-CoV-2","AATGACCTGGACATCC",5,74.55,10.65,-0.11,0.07,2.9,1.08,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","AATGACGATGACTAAC",1,64.9,10.57,-0.19,0.05,2.94,1.07,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","AATGACGGACAGGAAA",1,10.09,9.26,-1.51,0.37,1.5,1,0.06,">1 nonsynonymous","A14Y D59I",2
"lib1","SARS-CoV-2","AATGACGTCCACGTTA",6,9.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P96D C150I",2
"lib1","SARS-CoV-2","AATGACGTCTCAAGCG",8,75.32,6.41,-4.35,0.34,1.5,1.14,0.01,">1 nonsynonymous","C61Q D68V P149D",3
"lib1","SARS-CoV-2","AATGACTAAGTATAAA",1,22.4,9.9,-0.86,0.09,2.93,1.03,0,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","AATGACTAATCATACA",5,16.29,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G9T A33T G86R F99V G174D",5
"lib1","SARS-CoV-2","AATGACTACAACAACT",2,32.65,10.87,0.1,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGACTATATAGACC",4,0.8,NA,NA,NA,NA,NA,NA,"stop","T15I D34H Y91L I104S G117* V181M",6
"lib1","SARS-CoV-2","AATGACTCAATTTAAG",2,7.36,6,-4.76,2,3,1.07,0,">1 nonsynonymous","G101L N107G",2
"lib1","SARS-CoV-2","AATGACTCTCAGTAGA",7,58.21,7.06,-3.7,0.27,1.5,1.26,0.02,">1 nonsynonymous","P82L K87G",2
"lib1","SARS-CoV-2","AATGACTCTTATCTAC",2,13.55,10.98,0.22,0.14,2.9,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGACTCTTCTCATC",5,34.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R E76S I138Y",3
"lib1","SARS-CoV-2","AATGACTGTACCTCAT",4,293.52,10.25,-0.52,0.05,2.87,1,0,">1 nonsynonymous","V32S Y178N P191T",3
"lib1","SARS-CoV-2","AATGACTTCGTAGTAA",1,21.88,9.67,-1.1,0.17,2.26,1.05,0.01,"1 nonsynonymous","L38C",1
"lib1","SARS-CoV-2","AATGACTTCTTGTCTA",11,115.24,10.69,-0.07,0.04,2.89,1.05,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","AATGACTTGGTTAAAT",2,152.49,10.45,-0.31,0.04,2.88,1.04,0,">1 nonsynonymous","S36Q A42W S129C",3
"lib1","SARS-CoV-2","AATGAGAAAACCCTCC",1,31.97,10.67,-0.09,0.07,2.9,1.06,0,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","AATGAGAAAACGCTTG",3,37.8,9.7,-1.06,0.12,1.84,1.14,0.01,">1 nonsynonymous","G51T T140Y F160V",3
"lib1","SARS-CoV-2","AATGAGAAAATGAACG",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51P N58T L162Y",3
"lib1","SARS-CoV-2","AATGAGAAAGTATTGA",6,179.8,10.22,-0.55,0.05,2.84,1,0,">1 nonsynonymous","A14D S129V S200D",3
"lib1","SARS-CoV-2","AATGAGAAATAAGTGA",3,29.12,6.26,-4.51,0.74,1.5,1.17,0.04,">1 nonsynonymous","F8R A145E F156R",3
"lib1","SARS-CoV-2","AATGAGAAATCTTACC",2,27.1,10.64,-0.12,0.12,2.86,1.06,0,">1 nonsynonymous","T85Y K114L L122A",3
"lib1","SARS-CoV-2","AATGAGAAATGCAACC",7,82.58,9.7,-1.06,0.07,2.82,1.06,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","AATGAGAATACATAAT",3,28.64,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S36K T100S L122E K132S Y143E",5
"lib1","SARS-CoV-2","AATGAGAATTCTCACA",3,17.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14L W23R T63C N92K E141R H189V",6
"lib1","SARS-CoV-2","AATGAGACAAGGAAAG",4,14.53,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L5M R73S G83E D90L T100M I138Q T148S G172K V180Y",9
"lib1","SARS-CoV-2","AATGAGACCAGCTAAC",5,34.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51S D68M L95V",3
"lib1","SARS-CoV-2","AATGAGACGACCTTCC",6,143.27,10.7,-0.07,0.04,2.91,1.05,0,">1 nonsynonymous","V37L F62I G83R V173K",4
"lib1","SARS-CoV-2","AATGAGACTATAACAA",4,1.07,NA,NA,NA,NA,NA,NA,"stop","R27Q P161*",2
"lib1","SARS-CoV-2","AATGAGACTCGCTAGG",10,127.69,6.75,-4.01,0.26,1.5,1.14,0.01,">1 nonsynonymous","Y119A R136T T170E",3
"lib1","SARS-CoV-2","AATGAGACTTGATCTA",1,25.39,7.85,-2.91,0.22,1.72,1.05,0.02,">1 nonsynonymous","T55A D97K D112H T201A",4
"lib1","SARS-CoV-2","AATGAGAGATATATTT",1,20.7,9.91,-0.85,0.12,2.37,1.02,0.01,">1 nonsynonymous","D98F A105T Y143F",3
"lib1","SARS-CoV-2","AATGAGAGATGTCCTG",9,109.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N92M Y175M",2
"lib1","SARS-CoV-2","AATGAGAGCAAATCAA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Q84R K114R N120L G152I Y165*",5
"lib1","SARS-CoV-2","AATGAGAGGAACTACG",1,22.88,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90P Y121M F167Q P191T",4
"lib1","SARS-CoV-2","AATGAGAGGTCGTTTG",1,1.19,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119T Q176*",3
"lib1","SARS-CoV-2","AATGAGAGTCCAAGAA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","R27K K87C G117S I142*",4
"lib1","SARS-CoV-2","AATGAGATAGCGCTAG",14,152.3,9.94,-0.83,0.09,1.92,1.06,0,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","AATGAGATATATATAG",3,80.88,7.27,-3.49,0.13,1.94,1.15,0,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","AATGAGATCAATTATG",5,95.65,7.59,-3.18,0.25,1.5,1.14,0.02,">1 nonsynonymous","W23P R136Y E154I",3
"lib1","SARS-CoV-2","AATGAGCAAGACTTGC",6,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59F D68K",2
"lib1","SARS-CoV-2","AATGAGCAGTAAAATG",8,101.45,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F12S Y50L V77P A105V P133L T140S",6
"lib1","SARS-CoV-2","AATGAGCCTAGTTAAA",1,10.96,8.58,-2.19,0.16,2.97,1.05,0.01,">1 nonsynonymous","N24E Q168K",2
"lib1","SARS-CoV-2","AATGAGCCTTAAGAAC",1,1.19,NA,NA,NA,NA,NA,NA,"stop","A42* Q84S",2
"lib1","SARS-CoV-2","AATGAGCTTCACGGAC",3,21.3,10.23,-0.53,0.07,2.9,1,0,">1 nonsynonymous","P54R A89V",2
"lib1","SARS-CoV-2","AATGAGGAAATTTCCT",2,23.11,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","R16S D90M N171I Y175T",4
"lib1","SARS-CoV-2","AATGAGGCAAAAAAAA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","I2H T55* K87F",3
"lib1","SARS-CoV-2","AATGAGGCCATCCGCT",1,53.29,8.7,-2.06,0.07,2.83,1.09,0,">1 nonsynonymous","A89S N118V L125S",3
"lib1","SARS-CoV-2","AATGAGGCTTTCATGT",7,135.69,9.29,-1.47,0.06,2.7,1.09,0,">1 nonsynonymous","T148G Q163L Q168L",3
"lib1","SARS-CoV-2","AATGAGGGAAGTATTT",4,74.1,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F70V W106S",2
"lib1","SARS-CoV-2","AATGAGGGATGTTTCT",6,15.78,6,-4.76,1.79,1.5,1.13,0.01,">1 nonsynonymous","A14K A81I G86R I104W E141P F156K",6
"lib1","SARS-CoV-2","AATGAGGTCACTCGCG",3,9.17,6.01,-4.75,2,3,1.08,0.01,">1 nonsynonymous","K48E N92G W106T S184P",4
"lib1","SARS-CoV-2","AATGAGGTGTCTAGAA",5,181.51,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","W23T I88N",2
"lib1","SARS-CoV-2","AATGAGTAACACATCA",1,15.84,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y91S T148L C158F",3
"lib1","SARS-CoV-2","AATGAGTATTTGACAA",2,14.78,6.02,-4.74,1.72,1.5,1.26,0.05,">1 nonsynonymous","N58K G83A R124H G155M T170K",5
"lib1","SARS-CoV-2","AATGAGTCCGCGCCCC",7,73.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E S139D V181I",3
"lib1","SARS-CoV-2","AATGAGTCTTACATCA",2,9.77,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C49D G83L D112V",3
"lib1","SARS-CoV-2","AATGAGTGCTGGACGA",7,137.65,6,-4.76,1.32,1.5,1.19,0.01,">1 nonsynonymous","V52A E135S I142N P177G",4
"lib1","SARS-CoV-2","AATGAGTGTAACATAG",1,35.24,10.76,0,0.09,2.89,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGAGTTATAAATAC",3,25.7,10.5,-0.26,0.1,2.95,1.03,0,">1 nonsynonymous","G9F Y39K",2
"lib1","SARS-CoV-2","AATGATAAAACGCAAT",2,16.72,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","L5K A14M F44S V52Y G146S P149R F167N",7
"lib1","SARS-CoV-2","AATGATAAAATTATAT",2,163.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R D112F",2
"lib1","SARS-CoV-2","AATGATAAATAGGCTA",2,18.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N40G D68M G155M",3
"lib1","SARS-CoV-2","AATGATAACAAAAATT",2,22.72,8.95,-1.82,0.1,2.37,1.09,0.01,">1 nonsynonymous","N120T T148P",2
"lib1","SARS-CoV-2","AATGATAACAAGTACA",1,17.04,10.67,-0.1,0.06,2.96,1,0,">1 nonsynonymous","K56V Q168R",2
"lib1","SARS-CoV-2","AATGATAACATTTAAA",3,68.4,10.61,-0.15,0.05,2.91,1.05,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","AATGATAACCCCTACA",2,32.6,10.21,-0.56,0.13,2.62,1.06,0.01,">1 nonsynonymous","L60H F134C",2
"lib1","SARS-CoV-2","AATGATAAGTCTGCAC",2,55.43,10.76,-0.01,0.06,2.8,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGATAATACTCATT",2,8.77,6,-4.76,2,3,1.03,0,">1 nonsynonymous","C49H G117L Y175M",3
"lib1","SARS-CoV-2","AATGATAATGTAACCA",2,89.55,10.81,0.04,0.08,2.95,1.03,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","AATGATACAACAAACC",2,33.86,10.3,-0.47,0.13,2.16,1.03,0.01,">1 nonsynonymous","F47T D97F",2
"lib1","SARS-CoV-2","AATGATACAATAGACC",1,18.01,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","R78G D90R A105N G146R G155T G166V",6
"lib1","SARS-CoV-2","AATGATACACCTCAAA",4,43.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R D59S L95E K132R C158R",5
"lib1","SARS-CoV-2","AATGATACATATTTTA",2,48.62,10.65,-0.11,0.05,2.95,1.03,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","AATGATAGATAACTAT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","F44* T100V",2
"lib1","SARS-CoV-2","AATGATAGCAATCAAT",4,44.63,8.2,-2.57,0.21,1.53,1.12,0.01,">1 nonsynonymous","I2E V65R G146V",3
"lib1","SARS-CoV-2","AATGATATCTGCCCAA",1,16.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D112V Y123L N151Q P161T",4
"lib1","SARS-CoV-2","AATGATATGACTATGA",4,0,NA,NA,NA,NA,NA,NA,"stop","T63L V103* D112R",3
"lib1","SARS-CoV-2","AATGATATGTTTGCTG",5,31.17,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37S C61T K132W I142D G174W",5
"lib1","SARS-CoV-2","AATGATATTACAACGG",1,16.5,9.04,-1.72,0.14,2.35,1.11,0.01,">1 nonsynonymous","N107V F160N",2
"lib1","SARS-CoV-2","AATGATCATAAGCATT",3,15.69,6.18,-4.58,0.95,1.5,1.13,0.03,">1 nonsynonymous","S36C G74R I104K E135R E154H",5
"lib1","SARS-CoV-2","AATGATCCCCACAAAG",7,70.78,10.66,-0.1,0.05,2.91,1.05,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","AATGATCGAAATAACT",1,68.27,10.73,-0.04,0.04,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGATCGAATTCAAC",1,19.09,6.3,-4.47,0.43,1.5,1.08,0.01,">1 nonsynonymous","E76T G117R P149V",3
"lib1","SARS-CoV-2","AATGATCGCAATGTAA",3,39.39,6.14,-4.62,0.7,1.5,1.19,0.02,">1 nonsynonymous","C6M S45C K87F D98R",4
"lib1","SARS-CoV-2","AATGATCTTACTGAGG",2,11.61,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","E10L G83A I104T Y123I I142S F167D",6
"lib1","SARS-CoV-2","AATGATGAAAGGACTT",5,32.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4D Y39K K94Y K128L Y143V",5
"lib1","SARS-CoV-2","AATGATGACCCTTCGC",11,25.17,9.43,-1.34,0.31,1.5,1,0.05,">1 nonsynonymous","T3C A42T C49D",3
"lib1","SARS-CoV-2","AATGATGAGAAGAGAG",3,1.65,NA,NA,NA,NA,NA,NA,"stop","Y50S D90S C102E K132*",4
"lib1","SARS-CoV-2","AATGATGATATTTAAT",1,16.22,6.98,-3.78,0.3,1.56,1.2,0.02,">1 nonsynonymous","S43C N58Y I142V G155I",4
"lib1","SARS-CoV-2","AATGATGCAAGTGGTT",5,75.26,10.21,-0.55,0.09,2.74,1.01,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","AATGATGCGAACAGAT",1,16.64,10.58,-0.19,0.14,2.81,1.16,0.01,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","AATGATGGCTACATAG",1,33.27,7.65,-3.11,0.34,1.5,1.04,0.04,">1 nonsynonymous","P7K V37T Y91R G155L",4
"lib1","SARS-CoV-2","AATGATGTTTCACTTA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","Y50P N107* S129H",3
"lib1","SARS-CoV-2","AATGATTAACCAGACA",4,72.66,7.28,-3.48,0.14,1.61,1.11,0.01,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","AATGATTAAGAATTCT",1,28.36,10.7,-0.07,0.05,2.98,1,0,">1 nonsynonymous","I2L N64W S147A",3
"lib1","SARS-CoV-2","AATGATTAATATCATG",2,597.37,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D34L K128F T170R",3
"lib1","SARS-CoV-2","AATGATTACAATGCAC",8,5.85,NA,NA,NA,NA,NA,NA,"stop","F44S N64* N107L F134V",4
"lib1","SARS-CoV-2","AATGATTACTTTACGT",5,17.43,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V37R C61T V77H D112K E154S L162S",6
"lib1","SARS-CoV-2","AATGATTAGCGAAAAG",7,99.08,6.06,-4.7,0.5,1.5,1.1,0.01,">1 nonsynonymous","S19L L111N E141S",3
"lib1","SARS-CoV-2","AATGATTAGGCTTTTT",8,63.83,10.02,-0.75,0.1,1.98,1.05,0,">1 nonsynonymous","Y121Q T148R F185V",3
"lib1","SARS-CoV-2","AATGATTAGGTGATCT",4,79.34,10.27,-0.49,0.05,2.8,1,0,">1 nonsynonymous","C61V F99M N120Q",3
"lib1","SARS-CoV-2","AATGATTATTCTCAAG",4,38.07,9.51,-1.26,0.12,1.8,1.13,0,">1 nonsynonymous","S19M V52T",2
"lib1","SARS-CoV-2","AATGATTCATTCTCCC",2,14.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D112W Y119H F160H",3
"lib1","SARS-CoV-2","AATGATTCCCCAAGAT",6,13.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11D E76M S139I T140S N157P Q168H P191S",7
"lib1","SARS-CoV-2","AATGATTCCCTAAAAA",7,42.29,7.03,-3.73,0.34,1.5,1.26,0.03,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","AATGATTCTATCTCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L N64R R179S",3
"lib1","SARS-CoV-2","AATGATTGACGATGTA",1,12.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89C I104Q",2
"lib1","SARS-CoV-2","AATGATTGCCTTACCG",10,45.6,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y66D P96Q K132Y",3
"lib1","SARS-CoV-2","AATGATTGCGATATCC",4,79.35,9.42,-1.34,0.07,2.82,1.13,0,">1 nonsynonymous","T55S Y119P",2
"lib1","SARS-CoV-2","AATGATTGGCACAATT",1,18.41,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9N L95N K199Y",3
"lib1","SARS-CoV-2","AATGATTGTCTATATG",4,19.86,10.28,-0.49,0.06,3,1,0,"1 nonsynonymous","S36C",1
"lib1","SARS-CoV-2","AATGCAAAAGTTTTAT",1,17.3,10.77,0.01,0.08,2.98,1,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","AATGCAAAATCAACGG",5,1.58,NA,NA,NA,NA,NA,NA,"stop","N4* S139G",2
"lib1","SARS-CoV-2","AATGCAAAATGCTATT",6,98.52,10.8,0.03,0.08,2.89,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AATGCAAACCATAGGA",7,99.3,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","L60F D137G G146E N151K",4
"lib1","SARS-CoV-2","AATGCAAATATACAAC",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H Y165V",2
"lib1","SARS-CoV-2","AATGCAAATCAGCCCT",2,30.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68A G101D Y119C I142F",4
"lib1","SARS-CoV-2","AATGCAACACAAGAAT",5,75.81,10.63,-0.14,0.05,2.91,1.07,0,">1 nonsynonymous","K48E T148N",2
"lib1","SARS-CoV-2","AATGCAACATAAGAAC",2,38.41,10.76,-0.01,0.08,2.85,1.08,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","AATGCAACGCAACACC",2,23.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I80M Y93T S108V",3
"lib1","SARS-CoV-2","AATGCAAGATAAACTA",1,14,9.95,-0.81,0.18,2.03,1,0.01,">1 nonsynonymous","E10G F47R P54M",3
"lib1","SARS-CoV-2","AATGCAAGATTAAGCG",4,92.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L38S Q84Y I142A A190H",4
"lib1","SARS-CoV-2","AATGCAAGATTATGAA",1,11.41,6.17,-4.59,0.41,1.5,1.09,0.01,">1 nonsynonymous","P54S L183S",2
"lib1","SARS-CoV-2","AATGCAATACATTGAG",12,225.74,10.57,-0.19,0.05,2.97,1,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","AATGCAATTTAACACA",1,41.45,7.74,-3.03,0.32,1.5,1.11,0.03,">1 nonsynonymous","K94Q T148R Q176H",3
"lib1","SARS-CoV-2","AATGCACAAATAAAAT",6,99.49,6.13,-4.64,0.48,1.5,1.16,0.01,">1 nonsynonymous","C31S N58D L122V P177K",4
"lib1","SARS-CoV-2","AATGCACACGCTAAGG",4,33.67,6.18,-4.58,0.92,1.5,1.17,0.02,">1 nonsynonymous","C6F S29K D90A F167I",4
"lib1","SARS-CoV-2","AATGCACATACCGTGG",3,0.91,NA,NA,NA,NA,NA,NA,"stop","W23* S36K Y123V F167T",4
"lib1","SARS-CoV-2","AATGCACATATAATAG",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S Y93N G101D P133Q Q163T R179E",6
"lib1","SARS-CoV-2","AATGCACATCTTGAAT",5,44.91,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N4D Y91F R124G G146A N157D K199L T201M",7
"lib1","SARS-CoV-2","AATGCACATTCGGCCC",1,27.46,9.01,-1.75,0.22,1.75,1.1,0.02,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","AATGCACCAAGACAAA",6,33.31,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","I88R S139Y G152Y",3
"lib1","SARS-CoV-2","AATGCACCCACCTTAG",8,135.57,8.54,-2.22,0.13,2.91,1.08,0.01,">1 nonsynonymous","I2Y F156V G166R",3
"lib1","SARS-CoV-2","AATGCACCGCAGCACT",4,17.81,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G9P L95G W106Q",3
"lib1","SARS-CoV-2","AATGCACCTTAAAAGA",5,88.75,10.78,0.01,0.06,2.94,1.03,0,"1 nonsynonymous","I2D",1
"lib1","SARS-CoV-2","AATGCACGAGACAGGC",2,28,10.58,-0.19,0.05,2.87,1.04,0,">1 nonsynonymous","I2Y S41Y F134S",3
"lib1","SARS-CoV-2","AATGCACTACGTAGAA",4,35.84,8.81,-1.95,0.09,2.37,1.18,0,">1 nonsynonymous","T55V Y121K G174M",3
"lib1","SARS-CoV-2","AATGCACTAGTCACCA",1,45.68,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R25N A81Y",2
"lib1","SARS-CoV-2","AATGCAGCAAATTTGT",2,42.71,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","D68R E135G",2
"lib1","SARS-CoV-2","AATGCAGCATCGCCGA",1,18.92,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10I V37S V103C E141G Y159R",5
"lib1","SARS-CoV-2","AATGCAGCCACATGGA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V103* N157S",2
"lib1","SARS-CoV-2","AATGCAGCGGTATCGG",1,1.1,NA,NA,NA,NA,NA,NA,"stop","N1* I28L",2
"lib1","SARS-CoV-2","AATGCAGCTATAGAAC",5,19.87,10.28,-0.49,0.12,2.61,1.02,0.01,">1 nonsynonymous","C6N A18S",2
"lib1","SARS-CoV-2","AATGCAGCTTTACACG",5,2.23,NA,NA,NA,NA,NA,NA,"stop","Q144* P169R",2
"lib1","SARS-CoV-2","AATGCAGGCCAGGCTA",3,81.35,9.69,-1.08,0.08,1.92,1.11,0,">1 nonsynonymous","L5R S41L L60S R136I",4
"lib1","SARS-CoV-2","AATGCAGGTTCTACAC",7,184.07,10.72,-0.04,0.06,2.9,1.05,0,">1 nonsynonymous","N4D D59R",2
"lib1","SARS-CoV-2","AATGCAGTCCCTCGCA",2,59.25,9.39,-1.38,0.14,1.86,1.15,0.01,">1 nonsynonymous","N1L N107R A190I",3
"lib1","SARS-CoV-2","AATGCAGTCCGACCTG",11,0.91,NA,NA,NA,NA,NA,NA,"stop","G101S I104S P149C T201*",4
"lib1","SARS-CoV-2","AATGCATATAGAACGT",5,100.43,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A42S K56S G74S Y159E",4
"lib1","SARS-CoV-2","AATGCATCACCAAATA",2,13.28,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I2R R127D G174V",3
"lib1","SARS-CoV-2","AATGCATCACTTCCTT",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F C49V F70C G86A P169G",5
"lib1","SARS-CoV-2","AATGCATGGAGAATAA",2,33.66,9.38,-1.38,0.17,1.74,1.1,0.01,">1 nonsynonymous","G51F P149S A190V",3
"lib1","SARS-CoV-2","AATGCATGGGGCACCA",2,11.57,10.53,-0.23,0.08,3,1,0,">1 nonsynonymous","S36M T100H T148N V153G",4
"lib1","SARS-CoV-2","AATGCATTCCGCAAAG",2,53.79,6,-4.76,1.91,1.5,1.13,0.01,">1 nonsynonymous","N107S D137Q",2
"lib1","SARS-CoV-2","AATGCCAAAACTGAAT",5,14.2,9.07,-1.7,0.19,1.82,1.09,0.02,">1 nonsynonymous","E10V C31F D59I K199C T201K",5
"lib1","SARS-CoV-2","AATGCCAAACTTCGAT",8,17.11,6.03,-4.74,0.6,3,1.12,0.01,">1 nonsynonymous","S41K G101V K132H",3
"lib1","SARS-CoV-2","AATGCCAAATGGAGAA",3,34.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58R P82L P96N S108T",4
"lib1","SARS-CoV-2","AATGCCAATTCGTTCA",3,1.72,NA,NA,NA,NA,NA,NA,"stop","P96* R179V",2
"lib1","SARS-CoV-2","AATGCCACAACTTTGT",4,78.23,9.75,-1.01,0.1,2.06,1.1,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","AATGCCACCACAAAGT",6,22.4,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","A14L L57H C102Y Y159S S184R",5
"lib1","SARS-CoV-2","AATGCCACGCACAGGT",1,21.15,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","G166L L183A V194I C195F",4
"lib1","SARS-CoV-2","AATGCCATATAAAAAA",2,46.2,10.25,-0.51,0.06,2.87,1.05,0,">1 nonsynonymous","I104Y N107S H189N",3
"lib1","SARS-CoV-2","AATGCCCAAACTACCA",3,54.39,10.79,0.03,0.16,2.74,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGCCCAATCAATAT",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I C158G",2
"lib1","SARS-CoV-2","AATGCCCCGTTCGCAG",3,0.67,NA,NA,NA,NA,NA,NA,"stop","Y35V L60S Y91F N118*",4
"lib1","SARS-CoV-2","AATGCCCCTGAAGGCC",2,76.99,10.77,0.01,0.05,2.95,1.01,0,">1 nonsynonymous","T148E T201W",2
"lib1","SARS-CoV-2","AATGCCCGAATGACAA",2,9.54,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N4G R25P V103P L131W S139N Q168A",6
"lib1","SARS-CoV-2","AATGCCCTACGCGCTT",2,0.27,NA,NA,NA,NA,NA,NA,"stop","E135K G155N G172* G174F",4
"lib1","SARS-CoV-2","AATGCCCTATTCTTGA",6,16.4,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I28L D90F A105P T201R",4
"lib1","SARS-CoV-2","AATGCCGAAAAAATAA",4,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","AATGCCGAAATTTAAA",4,58.73,10.84,0.07,0.06,2.94,1.01,0,">1 nonsynonymous","I28L K199T",2
"lib1","SARS-CoV-2","AATGCCGCAGACAATC",5,87.82,10.75,-0.02,0.06,2.91,1.08,0,"1 nonsynonymous","V153E",1
"lib1","SARS-CoV-2","AATGCCGCTCCAACCT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H P169F",2
"lib1","SARS-CoV-2","AATGCCGGGTCTAACC",11,167.36,10.72,-0.04,0.05,2.9,1.03,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","AATGCCGGTTCCCGTT",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATGCCGTATCAGTCC",8,118.98,10.83,0.06,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGCCGTTCCAAACA",4,26.01,10.17,-0.59,0.06,2.75,1.02,0,">1 nonsynonymous","T63Q E135C",2
"lib1","SARS-CoV-2","AATGCCTACCACCAAC",3,34.85,8.56,-2.2,0.3,1.5,1.03,0.03,">1 nonsynonymous","I2A F47Y D59E D90E Y121K",5
"lib1","SARS-CoV-2","AATGCCTATTATAGGA",6,134.78,10.11,-0.65,0.08,2.27,1.06,0,">1 nonsynonymous","K56L S139I",2
"lib1","SARS-CoV-2","AATGCCTTCCCAATAA",5,14.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3A G101S N130L",3
"lib1","SARS-CoV-2","AATGCCTTCGAATTTG",1,56.1,9.66,-1.11,0.12,1.96,1.09,0,">1 nonsynonymous","N120M S139W",2
"lib1","SARS-CoV-2","AATGCCTTTAACATGA",3,41.61,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F99Y R124S",2
"lib1","SARS-CoV-2","AATGCGAAGATATTAC",4,35.22,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7K T63W N109Y C150W",4
"lib1","SARS-CoV-2","AATGCGATTCAAACTA",5,35.51,6.64,-4.12,0.36,1.5,1.14,0.02,">1 nonsynonymous","F8G A42S G83R R127A",4
"lib1","SARS-CoV-2","AATGCGCAAATCAATT",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T I142H",2
"lib1","SARS-CoV-2","AATGCGCAAATCCGCT",3,6.49,6,-4.76,1.83,1.5,1.21,0.05,">1 nonsynonymous","I28S G74V I138F V153F",4
"lib1","SARS-CoV-2","AATGCGCGAAGAATCA",2,21.17,10.53,-0.24,0.08,2.76,1.02,0,"1 nonsynonymous","L183V",1
"lib1","SARS-CoV-2","AATGCGCGAGTATAGT",1,25.73,6.86,-3.9,0.6,1.5,1.04,0.07,"1 nonsynonymous","I72K",1
"lib1","SARS-CoV-2","AATGCGCGCTAACTAA",2,20.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14Y A22T I142G",3
"lib1","SARS-CoV-2","AATGCGCGCTTCCTTA",8,0.88,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","AATGCGCGGAGACATG",1,6.06,8.48,-2.29,0.22,1.59,1.05,0.01,">1 nonsynonymous","F8K F134N",2
"lib1","SARS-CoV-2","AATGCGCGTGAGCGTT",2,9.4,6.43,-4.34,0.6,1.94,1.15,0.03,">1 nonsynonymous","F8S R25Y D34R D75V D90Y G101S L183H",7
"lib1","SARS-CoV-2","AATGCGGAAACAGAAT",6,62.85,10.5,-0.27,0.06,2.91,1,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","AATGCGGCCATAAAGG",4,183.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L I72W T100C",3
"lib1","SARS-CoV-2","AATGCGGGTGAGCACA",10,130.02,10.73,-0.04,0.06,2.9,1.04,0,">1 nonsynonymous","L5G S36R",2
"lib1","SARS-CoV-2","AATGCGGGTTTCGAAG",8,24.85,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","V77Y K87Y T100Y D137F",4
"lib1","SARS-CoV-2","AATGCGGTATTCGAAT",4,76.11,10,-0.77,0.09,2.77,1.03,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","AATGCGTACAGACCAT",5,128.36,10.54,-0.23,0.04,2.93,1.02,0,">1 nonsynonymous","V115M K132E E141S",3
"lib1","SARS-CoV-2","AATGCGTACCTCGTCA",10,112.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5R R16V T55P R73F K132H",5
"lib1","SARS-CoV-2","AATGCGTACGCATTGC",1,16.94,8.22,-2.54,0.28,2.68,1.1,0.05,">1 nonsynonymous","S53W Y159L",2
"lib1","SARS-CoV-2","AATGCGTATCGTTATA",17,2.95,NA,NA,NA,NA,NA,NA,"stop","A22T S41F C102D V153Y C158*",5
"lib1","SARS-CoV-2","AATGCGTCAGAGGCCT",4,101.49,10.1,-0.67,0.11,2.3,1,0.01,">1 nonsynonymous","Y35H F62G",2
"lib1","SARS-CoV-2","AATGCGTGTTAGAATA",3,173.08,10.56,-0.2,0.05,2.9,1.02,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","AATGCGTTATCTAGCC",10,59.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L131H G152H S184L",3
"lib1","SARS-CoV-2","AATGCGTTCAACCACT",1,29.05,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A33R A42Y F62Y V77W A105N",5
"lib1","SARS-CoV-2","AATGCTAAAGAGCACT",6,9.26,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","C102G",1
"lib1","SARS-CoV-2","AATGCTAACTTTGCGG",4,51.32,6.72,-4.05,0.25,1.5,1.15,0.01,">1 nonsynonymous","T3S N107T G146Q S164K",4
"lib1","SARS-CoV-2","AATGCTAATAAGACGC",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L N107I N130V",3
"lib1","SARS-CoV-2","AATGCTAATAATCGCA",2,35.16,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9V N64V I88C Y178A",4
"lib1","SARS-CoV-2","AATGCTACAAGGTGAA",2,16.06,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K87R P96S V103W Y119W R124H V173L",6
"lib1","SARS-CoV-2","AATGCTACTACAGTAC",2,6.25,10.34,-0.43,0.16,2.81,1,0.01,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","AATGCTACTGCTTCAA",2,64.89,10.2,-0.56,0.1,2.46,1,0,">1 nonsynonymous","C61L R73K I104C",3
"lib1","SARS-CoV-2","AATGCTAGGTATATGT",5,53.68,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9I V37R L95A T100K F126K T140L C158G",7
"lib1","SARS-CoV-2","AATGCTATACGCGCGG",3,37.87,6.31,-4.45,0.7,1.5,1.2,0.03,">1 nonsynonymous","A42I I104L C150P",3
"lib1","SARS-CoV-2","AATGCTATATATAGTT",11,153.89,10.29,-0.48,0.03,2.81,1.03,0,">1 nonsynonymous","F12V D59K",2
"lib1","SARS-CoV-2","AATGCTATGAATAAAA",2,4.21,NA,NA,NA,NA,NA,NA,"stop","F8S T63G D75*",3
"lib1","SARS-CoV-2","AATGCTATTAAACCCA",4,68.24,10.29,-0.47,0.04,2.93,1.05,0,">1 nonsynonymous","T3P F156L",2
"lib1","SARS-CoV-2","AATGCTCAACCGGAAC",3,32.7,10.67,-0.1,0.04,2.96,1.01,0,"1 nonsynonymous","P191I",1
"lib1","SARS-CoV-2","AATGCTCAAGGGAACC",7,98.11,8.4,-2.36,0.23,1.72,1.18,0.02,">1 nonsynonymous","V32R Y165S",2
"lib1","SARS-CoV-2","AATGCTCGGGCGCGTA",3,48.08,6,-4.76,2,1.5,1.25,0.02,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","AATGCTCTACCTACAA",8,125.64,10.58,-0.18,0.04,2.97,1.01,0,">1 nonsynonymous","S36L Q163I",2
"lib1","SARS-CoV-2","AATGCTGAAAGACTCC",5,35.93,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L57S T63S V71L G86R Y178D",5
"lib1","SARS-CoV-2","AATGCTGACGGACAAA",6,126.04,10.79,0.02,0.06,2.91,1.05,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","AATGCTGGACAATTCC",2,17.69,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","G9K D90R V103F P149L V180K",5
"lib1","SARS-CoV-2","AATGCTGTCATAGCGA",4,70.5,9.61,-1.16,0.13,2.1,1.09,0.01,">1 nonsynonymous","T46N A81S G116A",3
"lib1","SARS-CoV-2","AATGCTGTGAGTTTTT",1,5.49,9.76,-1,0.11,2.97,1.04,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","AATGCTTCCCGAGTAT",1,19.8,10.39,-0.38,0.14,2.88,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGCTTCTACCGACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114E G152A L183R",3
"lib1","SARS-CoV-2","AATGCTTGAACCATCG",3,37.66,10.72,-0.05,0.05,2.97,1.01,0,">1 nonsynonymous","D97A S129A",2
"lib1","SARS-CoV-2","AATGCTTGACGCTGGT",1,9.69,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","N92F Y143T",2
"lib1","SARS-CoV-2","AATGCTTTGGTTAACT",1,14.5,10.75,-0.01,0.06,2.9,1.13,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","AATGCTTTTCTTTACC",8,2.25,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib1","SARS-CoV-2","AATGCTTTTTTATAGG",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S V103P",2
"lib1","SARS-CoV-2","AATGGAAAAATAAGGT",3,81.37,8.57,-2.2,0.14,2.53,1.13,0.01,">1 nonsynonymous","P54Y G74E D97S F156V",4
"lib1","SARS-CoV-2","AATGGAAAACCTTATG",2,9.92,6.77,-4,0.81,1.5,1.11,0.08,">1 nonsynonymous","Y50N T55A D90V R127S P149T",5
"lib1","SARS-CoV-2","AATGGAAAAGACAAAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y S53K",2
"lib1","SARS-CoV-2","AATGGAAAATGCGCTT",6,128.56,10.75,-0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGGAAAATTTTAAA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87T F167W P177E",3
"lib1","SARS-CoV-2","AATGGAAACAGTCCCA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","L95W Y143*",2
"lib1","SARS-CoV-2","AATGGAAACATATTCC",5,29.26,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S113V R127H",2
"lib1","SARS-CoV-2","AATGGAAACGAAAAGT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R R124P",2
"lib1","SARS-CoV-2","AATGGAAATTTAACGA",4,3.84,NA,NA,NA,NA,NA,NA,"stop","G9D A33S Y50S K132R P149* L188F",6
"lib1","SARS-CoV-2","AATGGAACAAGCTACC",1,27.65,6.65,-4.11,0.66,1.5,1.2,0.06,">1 nonsynonymous","I28S I104N F126Y Y165R",4
"lib1","SARS-CoV-2","AATGGAACCACTCGTT",4,95.89,10.75,-0.01,0.09,2.9,1.06,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","AATGGAAGAAAAGATT",6,107.22,10.69,-0.07,0.06,2.92,1.06,0,"1 nonsynonymous","I104M",1
"lib1","SARS-CoV-2","AATGGAAGACCATCTA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","N4M T15C V77* P197T",4
"lib1","SARS-CoV-2","AATGGAAGACTAGTTC",6,1.82,NA,NA,NA,NA,NA,NA,"stop","G51D I88*",2
"lib1","SARS-CoV-2","AATGGAAGTAAACTAT",7,0.71,NA,NA,NA,NA,NA,NA,"stop","I138W Y159* Q168S",3
"lib1","SARS-CoV-2","AATGGAAGTATAGGAT",1,27.17,10.31,-0.45,0.07,2.77,1,0,">1 nonsynonymous","N13S Q168R",2
"lib1","SARS-CoV-2","AATGGAAGTCATAAAT",3,18.29,8.52,-2.24,0.26,1.5,1.05,0.04,">1 nonsynonymous","A14V Q84H G116P P149Q",4
"lib1","SARS-CoV-2","AATGGACACGCTCACA",2,64.68,8.34,-2.43,0.22,1.79,1.19,0.02,">1 nonsynonymous","F12L V37D F167W",3
"lib1","SARS-CoV-2","AATGGACATATGTGGC",5,28.54,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N24Y S36R V115L N157L",4
"lib1","SARS-CoV-2","AATGGACATTATCCAA",1,14.03,6,-4.76,2,3,1.1,0,">1 nonsynonymous","G9M S19K K87S N107Y S139G T170S Y175K",7
"lib1","SARS-CoV-2","AATGGACCTCTTAAAG",4,63.94,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N107P R127E Y178W",3
"lib1","SARS-CoV-2","AATGGACCTTCTCCGA",1,19.65,10.74,-0.03,0.05,2.92,1.06,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","AATGGACGCTCTATCA",9,148.88,10.55,-0.21,0.04,2.93,1.03,0,"1 nonsynonymous","V115G",1
"lib1","SARS-CoV-2","AATGGACTAAAAAAGA",2,107.49,7.66,-3.1,0.25,1.5,1.13,0.02,">1 nonsynonymous","A33Q Y165R",2
"lib1","SARS-CoV-2","AATGGACTACAACCGG",6,10.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99N C102G T148S",3
"lib1","SARS-CoV-2","AATGGACTGAAGGGGA",7,126.51,10.82,0.06,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGGACTTAATAATC",2,23.81,6.08,-4.69,1.2,1.5,1.17,0.03,">1 nonsynonymous","G51L I104G A190G",3
"lib1","SARS-CoV-2","AATGGAGCAAGAGTGA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A S69T",2
"lib1","SARS-CoV-2","AATGGAGGACCTGCCA",1,0.66,NA,NA,NA,NA,NA,NA,"stop","R73F K198*",2
"lib1","SARS-CoV-2","AATGGAGGATACGACT",19,3.18,NA,NA,NA,NA,NA,NA,"stop","N1Q F44M I88* T100N G155L",5
"lib1","SARS-CoV-2","AATGGAGTAAAAAGAA",1,38.19,10.35,-0.41,0.03,2.9,1.08,0,"1 nonsynonymous","G174K",1
"lib1","SARS-CoV-2","AATGGAGTAAAATGTG",11,134.32,10.72,-0.05,0.06,2.91,1.06,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","AATGGAGTCAATGATA",4,5.79,NA,NA,NA,NA,NA,NA,"stop","G86K A105F S139H P149I S184*",5
"lib1","SARS-CoV-2","AATGGAGTGATACCTT",7,0.05,NA,NA,NA,NA,NA,NA,"stop","P54K L60* Y121D G155H",4
"lib1","SARS-CoV-2","AATGGAGTGGAAGAAA",5,58.79,10.82,0.06,0.06,2.85,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGGATAACTCTAAA",6,104.45,10.82,0.06,0.07,2.93,1.03,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","AATGGATATAAAATGC",7,60.65,10.09,-0.67,0.09,2.73,1.01,0,"1 nonsynonymous","I88L",1
"lib1","SARS-CoV-2","AATGGATCCTTTGCCT",2,14.53,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48G V103F Q144H",3
"lib1","SARS-CoV-2","AATGGATGACTAAATT",4,64.92,10.22,-0.55,0.05,2.88,1.06,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","AATGGATGGCTGAATC",2,22.77,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","E10V T15L I28A T55L V71R G152D",6
"lib1","SARS-CoV-2","AATGGATGTAATAGGT",1,30.2,10.71,-0.06,0.05,2.92,1.07,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","AATGGATTAAAGTTTT",2,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L L57S D90N Y119F L131Y",5
"lib1","SARS-CoV-2","AATGGATTAATTAGAA",8,135.84,10.67,-0.1,0.05,2.93,1.05,0,">1 nonsynonymous","Y35L T63G",2
"lib1","SARS-CoV-2","AATGGATTGACTCGTA",1,12.74,9.05,-1.71,0.27,1.5,1.03,0.04,">1 nonsynonymous","D90Y I104S",2
"lib1","SARS-CoV-2","AATGGCAAACCAAGAG",8,94.55,10.04,-0.72,0.1,2.26,1,0,">1 nonsynonymous","V52M Y91K",2
"lib1","SARS-CoV-2","AATGGCACTAAGAATG",2,16.89,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y50I N120F Y143W N157S",4
"lib1","SARS-CoV-2","AATGGCACTTTCCACA",5,42.21,10.84,0.07,0.12,2.83,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGGCAGCTTTTATT",6,42.09,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","K94L Y165F",2
"lib1","SARS-CoV-2","AATGGCAGGGGCGCAA",2,50.25,10.78,0.02,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGGCATCCGCCCCG",1,7.23,10.11,-0.65,0.15,2.16,1,0,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","AATGGCCAAGATAAAC",3,26.9,9.55,-1.21,0.14,1.79,1.21,0.01,">1 nonsynonymous","N40P V77T E141T",3
"lib1","SARS-CoV-2","AATGGCCATAATTTTC",7,27.19,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","N107I Y165T",2
"lib1","SARS-CoV-2","AATGGCCTAACTTAAT",4,22,10.04,-0.73,0.2,2.52,1.02,0.02,">1 nonsynonymous","A14M S41Q S139D",3
"lib1","SARS-CoV-2","AATGGCCTCACTAGGA",11,54.06,6.46,-4.31,0.45,1.5,1.15,0.01,">1 nonsynonymous","A67S P82L E141P T148L P161I",5
"lib1","SARS-CoV-2","AATGGCCTTTAGCACG",12,188.79,10.87,0.11,0.07,2.89,1.05,0,">1 nonsynonymous","S43L I104F P197R",3
"lib1","SARS-CoV-2","AATGGCGGCTTCGGGC",3,18.95,9.92,-0.84,0.25,2.32,1.15,0.01,">1 nonsynonymous","N13S P191L",2
"lib1","SARS-CoV-2","AATGGCGGGTCCGCTG",5,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G G9I T140W",3
"lib1","SARS-CoV-2","AATGGCTAGCTACTAG",2,29.91,10.68,-0.09,0.11,2.94,1.02,0.01,">1 nonsynonymous","T3R V37Q",2
"lib1","SARS-CoV-2","AATGGCTGAAGAATTC",2,42.74,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2G I28K C150I",3
"lib1","SARS-CoV-2","AATGGCTGCAGCTCGC",1,12.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51L P82W S129Y P149S",4
"lib1","SARS-CoV-2","AATGGCTTCCTAGTGT",5,21.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D G101Y",2
"lib1","SARS-CoV-2","AATGGCTTGACCATAA",3,5.74,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I104H R179K",2
"lib1","SARS-CoV-2","AATGGCTTTAGCTGAA",10,61.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7T L60K Y66V N92R S139F",5
"lib1","SARS-CoV-2","AATGGGAAGGAAATCC",3,28.37,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N1K A67F D98S L131G G152R",5
"lib1","SARS-CoV-2","AATGGGAATGACCCAA",3,31.68,10.9,0.13,0.1,2.93,1.01,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","AATGGGACAACCTTCA",2,2.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","AATGGGAGTCAACACA",6,10.5,NA,NA,NA,NA,NA,NA,"stop","I2D P96* G155I Q176L",4
"lib1","SARS-CoV-2","AATGGGCCTCACACTC",6,23.46,10.86,0.09,0.07,2.96,1,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","AATGGGGTATAGGCTG",1,0.55,NA,NA,NA,NA,NA,NA,"stop","W23I C61* E141L",3
"lib1","SARS-CoV-2","AATGGGTACATTTTCA",8,12.36,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","P7Q F99N I104L",3
"lib1","SARS-CoV-2","AATGGGTATACCGGAC",3,83.47,10.77,0.01,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGGGTTAATTCCGA",4,11.71,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L95N Y119S",2
"lib1","SARS-CoV-2","AATGGTAACTAAAATA",7,1.38,NA,NA,NA,NA,NA,NA,"stop","S41* Y121V G172R L183F",4
"lib1","SARS-CoV-2","AATGGTAATATGTGTC",4,96.95,9.33,-1.44,0.15,1.5,1.07,0.01,">1 nonsynonymous","E10F S147R L162T",3
"lib1","SARS-CoV-2","AATGGTAATCTCACCA",6,21.75,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","T85I V103A I142A",3
"lib1","SARS-CoV-2","AATGGTAATGAACGCT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T S139T N171S",3
"lib1","SARS-CoV-2","AATGGTACCAGAAAAA",4,39.8,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I88M N171K F185M",3
"lib1","SARS-CoV-2","AATGGTACCTATCTGA",4,66.36,9.98,-0.79,0.07,2.25,1.07,0,"1 nonsynonymous","Y178R",1
"lib1","SARS-CoV-2","AATGGTAGATAACCCT",1,44.49,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12S I28G A42L G146L",4
"lib1","SARS-CoV-2","AATGGTAGCACTGATC",1,10.72,10.98,0.21,0.11,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGGTATTTATGCCA",1,48.17,10.07,-0.7,0.12,2.45,1.02,0.01,">1 nonsynonymous","S29T A42G A89I",3
"lib1","SARS-CoV-2","AATGGTCAACCATGAA",7,0.73,NA,NA,NA,NA,NA,NA,"stop","V37Y I104N S108* V173I",4
"lib1","SARS-CoV-2","AATGGTCAATACTGAA",4,3.51,NA,NA,NA,NA,NA,NA,"stop","E76R G172* V180T",3
"lib1","SARS-CoV-2","AATGGTCAATAGTTTG",9,51.02,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","T3V V71A Y93F N120Y F160T",5
"lib1","SARS-CoV-2","AATGGTCATCTGCAAG",3,20.8,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D68R T85L I142E",3
"lib1","SARS-CoV-2","AATGGTCCTTGTGAGG",11,18.24,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","T15N D68A D90V G101C I138Y P149R",6
"lib1","SARS-CoV-2","AATGGTCTAAATAATA",1,25.47,9.05,-1.71,0.08,2.82,1.18,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","AATGGTCTACAAACCA",2,15.43,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y93T D98L Y159F T201M",4
"lib1","SARS-CoV-2","AATGGTGAATATAGAG",5,87.66,10.08,-0.68,0.09,2.17,1,0,"1 nonsynonymous","I28T",1
"lib1","SARS-CoV-2","AATGGTGACGTCTTTA",3,109.79,10.61,-0.15,0.04,2.9,1.04,0,">1 nonsynonymous","A42T N120S V153F",3
"lib1","SARS-CoV-2","AATGGTGATCATATTA",2,28.03,6.4,-4.36,0.44,1.5,1.11,0.02,">1 nonsynonymous","F17L K56G V77E R136C G155M G174L",6
"lib1","SARS-CoV-2","AATGGTGCACATCACC",1,50.24,10.64,-0.13,0.06,2.91,1.07,0,">1 nonsynonymous","C61E E141N",2
"lib1","SARS-CoV-2","AATGGTGTAAAAAATC",13,4.61,NA,NA,NA,NA,NA,NA,"stop","S29* V103G G146R",3
"lib1","SARS-CoV-2","AATGGTGTGCTTCCAT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","A14* K198E",2
"lib1","SARS-CoV-2","AATGGTGTTCCAAATG",8,85.98,9.4,-1.37,0.11,2.17,1.12,0,">1 nonsynonymous","A14R Y121L P133S",3
"lib1","SARS-CoV-2","AATGGTGTTCCCGAAA",3,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L S41Y D59L K94V C102F S129N D137L",7
"lib1","SARS-CoV-2","AATGGTTATAGTAACG",3,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y E10I N92L T170S Y175S",5
"lib1","SARS-CoV-2","AATGGTTCAAAATAAG",2,25.2,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","L57Y K114L R127M",3
"lib1","SARS-CoV-2","AATGGTTCAATTCGCA",2,11.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103N P149L",2
"lib1","SARS-CoV-2","AATGGTTCGCGGGGCA",2,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V T100K G172R",3
"lib1","SARS-CoV-2","AATGGTTCTAGAAGCT",3,22.64,10.76,0,0.07,2.93,1,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","AATGGTTGATGAATAA",4,43.6,10.87,0.1,0.07,2.92,1.03,0,"1 nonsynonymous","K114A",1
"lib1","SARS-CoV-2","AATGGTTTATTGATGG",3,35.93,10.25,-0.51,0.09,2.76,1,0,"1 nonsynonymous","K48W",1
"lib1","SARS-CoV-2","AATGTAAAACCAAACC",3,46.88,8.13,-2.63,0.23,1.59,1.09,0.02,">1 nonsynonymous","T3K S45F T55I Y143V",4
"lib1","SARS-CoV-2","AATGTAAAACTTTCTG",2,22.97,10.15,-0.61,0.06,2.79,1.02,0,">1 nonsynonymous","T55S G83S D97A G116P",4
"lib1","SARS-CoV-2","AATGTAAAATACAGAA",1,26.64,10.86,0.1,0.08,2.94,1.02,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","AATGTAAACAAGGAGA",6,63.31,10.02,-0.75,0.1,2.17,1.05,0,">1 nonsynonymous","D97L I104S T140S",3
"lib1","SARS-CoV-2","AATGTAAACAATCAAC",2,30.58,7.27,-3.49,0.19,2.08,1.11,0.01,">1 nonsynonymous","T100M Y121L Y175L",3
"lib1","SARS-CoV-2","AATGTAAACCTTTACG",10,1.31,NA,NA,NA,NA,NA,NA,"stop","S43L F62R N107C V115S V153* G196F",6
"lib1","SARS-CoV-2","AATGTAAATAAACTGA",2,0.25,NA,NA,NA,NA,NA,NA,"stop","I28H F47L Q84* T140I",4
"lib1","SARS-CoV-2","AATGTAAATATATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43C S129F",2
"lib1","SARS-CoV-2","AATGTAAATCTGTAGT",6,129.48,10.74,-0.03,0.05,2.97,1,0,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","AATGTAAATGAGCTTA",1,32.52,9.87,-0.89,0.11,2.28,1.06,0,">1 nonsynonymous","L5W T100F F134K E141G",4
"lib1","SARS-CoV-2","AATGTAAATGATTGCA",7,31.52,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19W A105T G174I",3
"lib1","SARS-CoV-2","AATGTAACAAATCAAT",1,15.18,10.63,-0.13,0.11,2.82,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGTAACACTTCAAG",9,0.96,NA,NA,NA,NA,NA,NA,"stop","D34I N120P G155*",3
"lib1","SARS-CoV-2","AATGTAACAGGACTCA",3,21.07,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K48W Q84T P96K D98Y E141I",5
"lib1","SARS-CoV-2","AATGTAACGGCTAACC",6,70.86,10.17,-0.59,0.04,2.9,1.02,0,">1 nonsynonymous","T3L L60Y F126L T140I",4
"lib1","SARS-CoV-2","AATGTAACGGTGCCAA",3,56.73,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","K48L Y143D G155S",3
"lib1","SARS-CoV-2","AATGTAAGAACGACTG",11,5.23,NA,NA,NA,NA,NA,NA,"stop","G9* Y66T S113L F126T S139L G174R",6
"lib1","SARS-CoV-2","AATGTAAGACTACATG",1,54.86,10.75,-0.01,0.07,2.87,1.08,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","AATGTAAGGGAGAGAG",7,2.94,NA,NA,NA,NA,NA,NA,"stop","V103P P133I T140S L162* Y178S",5
"lib1","SARS-CoV-2","AATGTAATAGGTGACT",6,190.83,9.67,-1.1,0.04,2.85,1.06,0,">1 nonsynonymous","N120K T170Y",2
"lib1","SARS-CoV-2","AATGTAATCAACGCTT",3,1.28,NA,NA,NA,NA,NA,NA,"stop","A18I T140V K199*",3
"lib1","SARS-CoV-2","AATGTAATCCGCACAA",3,64.09,10.71,-0.05,0.07,2.97,1.01,0,">1 nonsynonymous","K26R A81S",2
"lib1","SARS-CoV-2","AATGTAATTTCTTACT",2,35.05,10.94,0.17,0.16,2.81,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATGTACAAATGCAGC",7,97.16,10.72,-0.05,0.06,2.93,1.05,0,"1 nonsynonymous","T46I",1
"lib1","SARS-CoV-2","AATGTACAACTGCAGG",4,110.7,10.55,-0.21,0.05,2.97,1,0,">1 nonsynonymous","I138Y K199N",2
"lib1","SARS-CoV-2","AATGTACACCCTTTGA",1,21.86,10.18,-0.59,0.09,2.79,1,0,">1 nonsynonymous","R27E F44A K87R A192N",4
"lib1","SARS-CoV-2","AATGTACAGTAAGCAG",4,12.85,9.18,-1.58,0.31,1.91,1.07,0.03,">1 nonsynonymous","D34S G174I",2
"lib1","SARS-CoV-2","AATGTACATGAAAGAA",8,0.32,NA,NA,NA,NA,NA,NA,"stop","C49* N92* Y121L",3
"lib1","SARS-CoV-2","AATGTACCCTGTGTGC",3,41.68,10.62,-0.15,0.05,2.84,1.08,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","AATGTACCTAAAAATT",2,32.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44E A89C T100N N107V",4
"lib1","SARS-CoV-2","AATGTACCTAACAAAT",3,25.23,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I72P F99S",2
"lib1","SARS-CoV-2","AATGTACGAACCAGAA",1,9.74,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","F12W K56V D90G Y123E L162R N171F",6
"lib1","SARS-CoV-2","AATGTACGCATGCCCT",3,116.04,10.8,0.04,0.06,2.94,1.03,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","AATGTACTATGGCGAA",3,31.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14V I88T V103G Q168E H189F",5
"lib1","SARS-CoV-2","AATGTACTCAGGACGA",5,36.76,6.09,-4.67,0.93,1.5,1.17,0.02,">1 nonsynonymous","D90R Y165K K199N",3
"lib1","SARS-CoV-2","AATGTAGCGGCGCCCT",1,12.99,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R27S Y35I K48P R78F V103Y R124Q L131V P149Y E154Q",9
"lib1","SARS-CoV-2","AATGTAGTCTAATAAA",2,42.17,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I2W T55I L122E F167T",4
"lib1","SARS-CoV-2","AATGTAGTTCTAACCC",1,30.21,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61V N107R L131K",3
"lib1","SARS-CoV-2","AATGTATAACACGCCA",4,59.01,8.66,-2.11,0.12,1.66,1.12,0.01,">1 nonsynonymous","N4T G86M",2
"lib1","SARS-CoV-2","AATGTATAATCTAAGA",2,18.59,10.55,-0.21,0.09,2.94,1.07,0.01,"1 nonsynonymous","A14Q",1
"lib1","SARS-CoV-2","AATGTATAGAAGCGTA",3,19.4,9.17,-1.59,0.16,2.17,1.19,0.02,">1 nonsynonymous","S36E L57N T170W",3
"lib1","SARS-CoV-2","AATGTATAGTGACTAA",5,56.81,10.7,-0.07,0.06,2.9,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AATGTATATATTAACT",7,165.89,10.17,-0.59,0.05,2.76,1.02,0,">1 nonsynonymous","P7Q T15F",2
"lib1","SARS-CoV-2","AATGTATATTGGACAA",1,21.65,10.38,-0.39,0.09,2.73,1.19,0,"1 nonsynonymous","Y35A",1
"lib1","SARS-CoV-2","AATGTATATTGGAGTG",3,1.92,NA,NA,NA,NA,NA,NA,"stop","G9R C158W V180*",3
"lib1","SARS-CoV-2","AATGTATCAATATTGT",8,25.38,7.29,-3.47,0.23,1.5,1.17,0.02,">1 nonsynonymous","N13K V153F Q163T T170P",4
"lib1","SARS-CoV-2","AATGTATCAATCTATA",1,22.49,6,-4.76,1.86,1.5,1.17,0.03,">1 nonsynonymous","K94P F99R E141P",3
"lib1","SARS-CoV-2","AATGTATCGGGTACCA",3,30.89,7.63,-3.13,0.26,1.5,1.16,0.02,">1 nonsynonymous","T85S K94V E141C",3
"lib1","SARS-CoV-2","AATGTATCGTCCTTGA",6,0.45,NA,NA,NA,NA,NA,NA,"stop","L5* N30R N58L Y123K",4
"lib1","SARS-CoV-2","AATGTATCTAAAGCAA",8,4.91,NA,NA,NA,NA,NA,NA,"stop","N110I P191I K199*",3
"lib1","SARS-CoV-2","AATGTATGCAATTACA",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Q D98L",2
"lib1","SARS-CoV-2","AATGTATTAAGCTAAT",2,21.51,10.27,-0.5,0.11,2.6,1.05,0.01,">1 nonsynonymous","E76H S129T S139I S200L",4
"lib1","SARS-CoV-2","AATGTATTCACCGCAT",2,46.82,10.74,-0.02,0.09,2.93,1.03,0,"1 nonsynonymous","N109V",1
"lib1","SARS-CoV-2","AATGTATTGAGTAGAG",1,30.82,9.97,-0.79,0.12,1.98,1.07,0.01,">1 nonsynonymous","F70Y S108T V173A P197W",4
"lib1","SARS-CoV-2","AATGTCAAAACATTTG",2,9.93,6,-4.76,2,3,1.05,0,">1 nonsynonymous","F8K K94M Y119I Y143H",4
"lib1","SARS-CoV-2","AATGTCAAGCTAGACC",2,23.58,10.71,-0.05,0.07,2.98,1,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","AATGTCAATAAATGTC",12,115.58,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G9D G83S F99L D112K F134H",5
"lib1","SARS-CoV-2","AATGTCACATATAGGC",3,31.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F62A Q84H W106S E141I",4
"lib1","SARS-CoV-2","AATGTCACCTGATATA",1,5.57,11.04,0.27,0.19,2.82,1.14,0.01,"1 nonsynonymous","I28F",1
"lib1","SARS-CoV-2","AATGTCAGACCGCAAT",2,34.33,6.41,-4.36,0.56,1.5,1.21,0.02,">1 nonsynonymous","S19L Y35V S43E L187P",4
"lib1","SARS-CoV-2","AATGTCAGCAATGAGT",4,54.21,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G116H P133T C150I G155Y N157K",5
"lib1","SARS-CoV-2","AATGTCAGGTAGCATG",3,9.37,9.63,-1.14,0.48,1.5,1,0.08,">1 nonsynonymous","G9E T15R S113R S184D",4
"lib1","SARS-CoV-2","AATGTCATAATAATCA",1,6.71,10.78,0.01,0.1,3,1,0.01,"1 nonsynonymous","N64M",1
"lib1","SARS-CoV-2","AATGTCATCAAGAACG",1,26.36,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G86F A105M",2
"lib1","SARS-CoV-2","AATGTCATCAATAAAG",3,32.92,10.83,0.06,0.06,2.94,1.03,0,"1 nonsynonymous","Q168A",1
"lib1","SARS-CoV-2","AATGTCATGAAAGGCT",5,33.99,10.6,-0.16,0.05,3,1,0,">1 nonsynonymous","F8M T201H",2
"lib1","SARS-CoV-2","AATGTCCAAACATTAA",3,31.06,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F47Y L131G G155E",3
"lib1","SARS-CoV-2","AATGTCCAATTCCCTG",1,37.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9V S29L R179D",3
"lib1","SARS-CoV-2","AATGTCCACCTTGAAA",7,135.71,10.61,-0.16,0.09,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTCCAGCTACAAC",7,49.6,9.71,-1.05,0.1,1.94,1.06,0,">1 nonsynonymous","V11G K132S",2
"lib1","SARS-CoV-2","AATGTCCAGGCCGACC",4,94.08,10.4,-0.36,0.05,2.89,1.03,0,"1 nonsynonymous","V65T",1
"lib1","SARS-CoV-2","AATGTCCCTAGAACTG",3,16.39,10.53,-0.24,0.09,2.67,1.3,0,">1 nonsynonymous","S45N Q168F",2
"lib1","SARS-CoV-2","AATGTCCTCCTCTTAC",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y C61M V71W L122G E135L",5
"lib1","SARS-CoV-2","AATGTCCTTGTTAATT",6,101.57,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V11C N40R C158R P197V",4
"lib1","SARS-CoV-2","AATGTCGAGATAACCC",13,56.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K56R A89I W106E E186D",4
"lib1","SARS-CoV-2","AATGTCGATCATTGTA",5,68.28,10.6,-0.17,0.05,2.94,1.02,0,">1 nonsynonymous","V37M F44G",2
"lib1","SARS-CoV-2","AATGTCGGTTACTACA",4,0.2,NA,NA,NA,NA,NA,NA,"stop","N13K S29F T100* K128V R136D Y159Q",6
"lib1","SARS-CoV-2","AATGTCTAATAGGAAC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","F12T S69* A81S D90Y P197E",5
"lib1","SARS-CoV-2","AATGTCTATAAGTTCA",1,95.55,9.98,-0.78,0.05,2.83,1.02,0,">1 nonsynonymous","K87A R136V",2
"lib1","SARS-CoV-2","AATGTCTATGTTAGTG",5,76.78,6.6,-4.17,0.41,1.5,1.15,0.02,">1 nonsynonymous","G9A S19Q L38N S45P T100N",5
"lib1","SARS-CoV-2","AATGTCTCCTAGTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R D90K N171H Q176K",4
"lib1","SARS-CoV-2","AATGTCTGGAAACTAG",4,2.78,NA,NA,NA,NA,NA,NA,"stop","Y39P T63M R127C E135*",4
"lib1","SARS-CoV-2","AATGTCTGTCACCATT",4,51.02,6.66,-4.1,0.31,1.5,1.17,0.01,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","AATGTCTTCGTCCGGG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G174D V182N",2
"lib1","SARS-CoV-2","AATGTCTTGGGATCAT",1,1.59,NA,NA,NA,NA,NA,NA,"stop","N40* I104G",2
"lib1","SARS-CoV-2","AATGTGAAAAGTTGAA",3,18.04,6,-4.76,0.79,1.5,1.05,0,">1 nonsynonymous","I72F D112R T148C",3
"lib1","SARS-CoV-2","AATGTGAACTAATATT",1,16.88,6.65,-4.11,0.23,2.39,1.16,0.01,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","AATGTGAAGAACAGTA",4,35.76,10.82,0.06,0.09,2.92,1.03,0,"1 nonsynonymous","S200R",1
"lib1","SARS-CoV-2","AATGTGAATATAAATA",4,36.69,8.87,-1.89,0.14,2.3,1.08,0.01,">1 nonsynonymous","Y39I N107L",2
"lib1","SARS-CoV-2","AATGTGAATATGACTA",3,87.81,10.74,-0.02,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTGAATATTTAAT",9,116.18,10.57,-0.19,0.07,2.88,1.08,0,"1 nonsynonymous","N130S",1
"lib1","SARS-CoV-2","AATGTGACATCCGGCT",1,1.23,NA,NA,NA,NA,NA,NA,"stop","A81* F99S N107G G116D",4
"lib1","SARS-CoV-2","AATGTGACCTAGGCTG",3,16.15,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","AATGTGACTTAGATGC",5,9.23,6,-4.76,2,1.5,1.33,0.02,">1 nonsynonymous","P7G A42L G51F D59P N107Y E135P Q144R",7
"lib1","SARS-CoV-2","AATGTGAGTTGGATTT",5,60.34,10.51,-0.26,0.07,2.88,1.05,0,">1 nonsynonymous","C61K E141L",2
"lib1","SARS-CoV-2","AATGTGATAAACCTCA",1,33.66,8.07,-2.69,0.23,1.64,1.12,0.02,">1 nonsynonymous","Q84T N107A G166L",3
"lib1","SARS-CoV-2","AATGTGATAACAGGGG",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137G Q144A",2
"lib1","SARS-CoV-2","AATGTGATAATTACGT",3,14.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D34A C49F Y50S W106C Y175Q",5
"lib1","SARS-CoV-2","AATGTGATTTAACGTT",11,163.55,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A22Y G86T Y93L",3
"lib1","SARS-CoV-2","AATGTGCAATAGTGCT",2,34.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17G F70R",2
"lib1","SARS-CoV-2","AATGTGCACAAATAAA",7,0.34,NA,NA,NA,NA,NA,NA,"stop","L5H V115R R179*",3
"lib1","SARS-CoV-2","AATGTGCCAACCCAAT",4,53.64,10.67,-0.09,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTGCCGTGACCTC",5,58.67,10.77,0.01,0.08,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTGCCTCAGGTCG",1,26.29,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","N40Y F44V W106T T148F L162Y",5
"lib1","SARS-CoV-2","AATGTGCGAGGCGGAT",3,90.4,10.77,0,0.05,2.95,1.04,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","AATGTGCGCGATCATG",3,78.04,10.69,-0.07,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTGCTGAGCAAAT",1,17.67,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F12M S29M Y35V Y50L G83F R124A N130V",7
"lib1","SARS-CoV-2","AATGTGCTTACATGCA",2,52.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N40H A89K D112A",3
"lib1","SARS-CoV-2","AATGTGGAAAAAAATA",4,65.75,10.1,-0.67,0.05,2.75,1.08,0,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","AATGTGGACGAGGTAA",1,45.08,10.51,-0.25,0.06,2.89,1.01,0,">1 nonsynonymous","S41Y D98Y",2
"lib1","SARS-CoV-2","AATGTGGAGGAATGAA",4,40.84,10.05,-0.72,0.12,2.52,1.04,0,">1 nonsynonymous","D34I S41H",2
"lib1","SARS-CoV-2","AATGTGGCCGATTTAA",5,51.51,6.96,-3.81,0.3,1.5,1.24,0.02,">1 nonsynonymous","S53L D59R F167L",3
"lib1","SARS-CoV-2","AATGTGGTTGTGAATA",11,46.4,6,-4.76,2,3,1.22,0,">1 nonsynonymous","V103H Q144L",2
"lib1","SARS-CoV-2","AATGTGTACAAGGAAA",2,17.66,6.8,-3.96,0.41,1.5,1.15,0.03,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","AATGTGTATTACTAAA",5,28.82,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","N1R W106P R136A",3
"lib1","SARS-CoV-2","AATGTGTATTCCAGGA",2,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R L60N Q168R K198Q",4
"lib1","SARS-CoV-2","AATGTGTCCTACAATT",4,66.9,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N109S Q144V P149S Q168I",4
"lib1","SARS-CoV-2","AATGTGTCTACAACTG",3,7.04,10.6,-0.16,0.26,2.86,1.01,0.02,">1 nonsynonymous","T100Y E141L",2
"lib1","SARS-CoV-2","AATGTGTTACAAGGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","AATGTGTTGGCTTCAA",5,147.37,10.61,-0.15,0.04,2.92,1.03,0,"1 nonsynonymous","T46D",1
"lib1","SARS-CoV-2","AATGTTAAAGCACGGT",3,24.17,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","S41W N107V G146I",3
"lib1","SARS-CoV-2","AATGTTAAAGTTAATC",3,10.07,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A14Q R25A D90V N157K",4
"lib1","SARS-CoV-2","AATGTTAAATCGACAA",2,6.91,7.43,-3.34,0.62,1.5,1.18,0.05,">1 nonsynonymous","C6R A14R Q79L N120H S129T",5
"lib1","SARS-CoV-2","AATGTTAAGAAAAACT",2,0.37,NA,NA,NA,NA,NA,NA,"stop","C6D P133M T140* F156V A190V",5
"lib1","SARS-CoV-2","AATGTTAATATGCATT",3,57.18,9.43,-1.33,0.12,2.3,1.12,0.01,">1 nonsynonymous","P149S Y165M",2
"lib1","SARS-CoV-2","AATGTTACAAACACAA",4,53.69,7.67,-3.09,0.39,1.5,1.08,0.05,">1 nonsynonymous","V11A A33R Y165L",3
"lib1","SARS-CoV-2","AATGTTACAACCCCAC",3,47.24,10.38,-0.38,0.04,2.96,1.03,0,">1 nonsynonymous","R16D G174K",2
"lib1","SARS-CoV-2","AATGTTACAACTACCC",3,13.28,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95Q S113V K198N",3
"lib1","SARS-CoV-2","AATGTTACATAAGACA",5,37.81,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S45E D68V L122W E135L N157V",5
"lib1","SARS-CoV-2","AATGTTACCAAACTAT",2,95.19,8.31,-2.46,0.13,2.2,1.09,0.01,">1 nonsynonymous","E76W S113R",2
"lib1","SARS-CoV-2","AATGTTACGAACAGGG",2,1.88,NA,NA,NA,NA,NA,NA,"stop","K26S A42R F99P L131*",4
"lib1","SARS-CoV-2","AATGTTACTAACAGCT",2,8.36,11.08,0.31,0.16,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTTACTGAGTAGG",3,97.77,10.73,-0.03,0.08,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AATGTTAGATATGCCT",5,19.4,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10C T63L F99V V181S",4
"lib1","SARS-CoV-2","AATGTTAGCAAAAAAA",1,39.54,9.94,-0.82,0.11,2.34,1.02,0,">1 nonsynonymous","R127S E141A",2
"lib1","SARS-CoV-2","AATGTTAGGTTAATTG",7,75.98,10.59,-0.17,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTTAGTGATGACT",2,47.04,10.73,-0.04,0.06,2.97,1.03,0,">1 nonsynonymous","L5N G83C",2
"lib1","SARS-CoV-2","AATGTTATACAGGATA",2,75.56,9.7,-1.07,0.09,2.46,1.11,0,">1 nonsynonymous","N4W D97S K128L F156P",4
"lib1","SARS-CoV-2","AATGTTATACCTGTTA",1,10.71,6,-4.76,1.67,1.5,1.11,0.04,">1 nonsynonymous","T15Y D90Y N107L",3
"lib1","SARS-CoV-2","AATGTTATATACAGGT",2,91.9,10.32,-0.45,0.06,2.87,1.01,0,">1 nonsynonymous","I2A N13S K48Q S200Y",4
"lib1","SARS-CoV-2","AATGTTCATGACCACG",4,99.28,10.79,0.03,0.06,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTTCCCATTGGCG",1,20.73,6.48,-4.29,0.66,1.5,1.28,0.04,">1 nonsynonymous","Y66C L131Q G166N",3
"lib1","SARS-CoV-2","AATGTTCCGACGAACT",1,31.32,10.7,-0.06,0.05,2.89,1.06,0,">1 nonsynonymous","I2T N120A",2
"lib1","SARS-CoV-2","AATGTTCGATTAAAAT",2,92.6,9.55,-1.21,0.1,1.87,1.11,0,">1 nonsynonymous","N40C D75G",2
"lib1","SARS-CoV-2","AATGTTCGCCTCGCTG",3,10.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19T C49D N171M",3
"lib1","SARS-CoV-2","AATGTTGACATACCCA",11,137.52,10.81,0.04,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATGTTGACTTTAACA",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I S19K Y119S S139N",4
"lib1","SARS-CoV-2","AATGTTGAGCTAAATA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","A81I W106E S108T E135T R179* P197W",6
"lib1","SARS-CoV-2","AATGTTGATGCACAAC",4,28.55,6.01,-4.75,0.85,3,1.22,0.01,">1 nonsynonymous","K56E Y66D S69M G86N K132Y",5
"lib1","SARS-CoV-2","AATGTTGCTACACAGA",8,145.23,10.12,-0.65,0.09,2.14,1.02,0,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","AATGTTGTAATCGGAT",6,70.15,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L57K V77R",2
"lib1","SARS-CoV-2","AATGTTGTACACTATA",1,85.98,7.92,-2.84,0.14,1.61,1.12,0.01,">1 nonsynonymous","A14R V65R F126A",3
"lib1","SARS-CoV-2","AATGTTGTTGGATATC",4,4.13,NA,NA,NA,NA,NA,NA,"stop","F17V A67R F167Y Y175*",4
"lib1","SARS-CoV-2","AATGTTTAACATCAAC",2,10.19,6.27,-4.5,0.93,1.5,1.16,0.03,">1 nonsynonymous","P54F Q168P V173E A190L",4
"lib1","SARS-CoV-2","AATGTTTCGTCCTCAT",4,60.11,10.83,0.07,0.09,2.85,1.05,0,"1 nonsynonymous","K198H",1
"lib1","SARS-CoV-2","AATGTTTGGAACATAA",7,67.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68V A145C Y159M G174R S184N",5
"lib1","SARS-CoV-2","AATGTTTTACGTAGGA",9,62.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S G51I",2
"lib1","SARS-CoV-2","AATGTTTTATTTTGTG",2,41.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66L N107T E141I",3
"lib1","SARS-CoV-2","AATGTTTTTTCCACAG",1,4.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","AATTAAAAAACTCCCT",5,53.82,9.86,-0.9,0.08,1.94,1.06,0,">1 nonsynonymous","N1R G51Y",2
"lib1","SARS-CoV-2","AATTAAAAACCATCCT",11,208.48,10.71,-0.05,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTAAAAACGATTAA",7,76.12,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","P54G N92L G117F",3
"lib1","SARS-CoV-2","AATTAAAAATATAATA",10,99.67,10.63,-0.13,0.05,2.88,1.07,0,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","AATTAAAAATGCACCC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","R27V W106*",2
"lib1","SARS-CoV-2","AATTAAAACACAACTT",14,69.8,6,-4.76,1.49,1.5,1.26,0.03,">1 nonsynonymous","P96S T100P",2
"lib1","SARS-CoV-2","AATTAAAACAGGCGTT",10,82.9,10.54,-0.23,0.05,2.85,1.03,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","AATTAAAACCATGCAA",1,7.44,9.37,-1.39,0.19,2.71,1.02,0.01,">1 nonsynonymous","S36R Y119G G155D",3
"lib1","SARS-CoV-2","AATTAAAACCGCCAGA",3,39.08,10.16,-0.6,0.07,2.84,1.05,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","AATTAAAACGAGACTG",3,20.03,10.11,-0.65,0.29,1.5,1,0.03,">1 nonsynonymous","G83N V173T",2
"lib1","SARS-CoV-2","AATTAAAACGCACAAT",1,9.92,7.11,-3.66,0.68,1.57,1.37,0.06,">1 nonsynonymous","A42S N92E",2
"lib1","SARS-CoV-2","AATTAAAAGGGGAAAA",5,144.42,10.37,-0.4,0.04,2.84,1.03,0,">1 nonsynonymous","N64Y D90F",2
"lib1","SARS-CoV-2","AATTAAAATGCATTAT",1,20.26,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","R27G L95T",2
"lib1","SARS-CoV-2","AATTAAAATGCTTAAG",2,40.52,10.72,-0.04,0.07,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTAAACAACCGAAC",11,51.76,6,-4.76,0.85,3,1.21,0,">1 nonsynonymous","P96D R136C F185H",3
"lib1","SARS-CoV-2","AATTAAACAGCGAAAC",1,127.19,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14E V37N Y50D A81T N107C Y143R F156V Q176Y",8
"lib1","SARS-CoV-2","AATTAAACAGGCCAAC",2,9.79,8.77,-1.99,0.11,2.37,1.13,0.01,">1 nonsynonymous","Y121T S129W",2
"lib1","SARS-CoV-2","AATTAAACATGAGACG",1,36.53,6.14,-4.63,1.03,1.5,1.27,0.04,">1 nonsynonymous","I2N F17T I28A F44Y T148A T193I",6
"lib1","SARS-CoV-2","AATTAAACATTAGAAG",3,47.44,10.66,-0.11,0.06,2.97,1,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","AATTAAACCTTTCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V71K V103S Y123C N151*",4
"lib1","SARS-CoV-2","AATTAAACGAATGAAA",3,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P D112V R124S Y143R P161S",5
"lib1","SARS-CoV-2","AATTAAACTAAGCAGA",4,37.95,9.16,-1.6,0.22,1.5,1.13,0.02,">1 nonsynonymous","I2L V11S D97Y",3
"lib1","SARS-CoV-2","AATTAAAGAGCAGCTA",3,20.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44C C49Y L57S D98K S129I A145F G152N",7
"lib1","SARS-CoV-2","AATTAAAGCATCTCGA",8,101.07,6,-4.76,2,3,1.24,0,">1 nonsynonymous","Y165N Y175V P197S",3
"lib1","SARS-CoV-2","AATTAAAGCCACCATA",3,12.32,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N4I R16P V37E G83H V180W",5
"lib1","SARS-CoV-2","AATTAAAGCGAACCAA",4,0.74,NA,NA,NA,NA,NA,NA,"stop","N4H D90Y N120* T170M",4
"lib1","SARS-CoV-2","AATTAAAGGGAAACTT",11,8.05,7.86,-2.9,0.32,1.5,1.22,0.04,">1 nonsynonymous","N13M C49Y",2
"lib1","SARS-CoV-2","AATTAAAGGGTCATTT",4,17.9,10.01,-0.76,0.13,2.46,1,0.01,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","AATTAAAGTAAAACCA",2,40.79,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","E10Q Y93V",2
"lib1","SARS-CoV-2","AATTAAATACATACAA",2,25.38,6.17,-4.59,1.06,1.5,1.11,0.04,">1 nonsynonymous","Y35R T55F D90R P96M N118L G155V",6
"lib1","SARS-CoV-2","AATTAAATAGTGACGT",7,95.08,10.62,-0.14,0.07,2.9,1.01,0,"1 nonsynonymous","T63P",1
"lib1","SARS-CoV-2","AATTAAATCTAACAGT",1,5.69,10.92,0.15,0.6,2.65,1,0.04,">1 nonsynonymous","C61R P149T",2
"lib1","SARS-CoV-2","AATTAAATGAAAAGAT",1,22.77,7.47,-3.3,0.21,1.52,1.09,0.02,">1 nonsynonymous","A81R A89N D98S",3
"lib1","SARS-CoV-2","AATTAAATGTAAAGAA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","G9* D98E S129M",3
"lib1","SARS-CoV-2","AATTAAATGTATGGAA",5,42.58,8.88,-1.88,0.18,1.81,1.09,0.02,">1 nonsynonymous","L5R A42R I88F L122R T201E",5
"lib1","SARS-CoV-2","AATTAAATGTTTCGCG",1,24.87,10.82,0.05,0.07,2.97,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTAAATTTCACACT",8,30.23,9.39,-1.38,0.1,1.95,1.08,0,">1 nonsynonymous","N64K F134T E154G S200R",4
"lib1","SARS-CoV-2","AATTAAATTTCGCCCG",6,24.94,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","G9S A33V G86F P169L T201L",5
"lib1","SARS-CoV-2","AATTAACAAACAGATT",2,52.32,10.06,-0.7,0.12,2.38,1.03,0.01,">1 nonsynonymous","A81D K128S",2
"lib1","SARS-CoV-2","AATTAACAACTTGCAA",6,20.41,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S69K P82M D90Y N151L N157S V173L",6
"lib1","SARS-CoV-2","AATTAACACACTCCTT",1,40.43,10.81,0.05,0.09,2.91,1.05,0,"1 nonsynonymous","F62Y",1
"lib1","SARS-CoV-2","AATTAACACAGACAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","P7A D34G F44I N58R W106D G166*",6
"lib1","SARS-CoV-2","AATTAACACTCAAAAG",2,60.25,8.99,-1.77,0.16,1.59,1.11,0.01,">1 nonsynonymous","V37I S53V N64G R179K",4
"lib1","SARS-CoV-2","AATTAACAGCAAAATG",5,58.46,10.8,0.04,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTAACATTCATAAG",4,60.81,9.88,-0.88,0.12,2.32,1.07,0.01,">1 nonsynonymous","V11Y E135M",2
"lib1","SARS-CoV-2","AATTAACATTCCGTTG",4,58.93,10.1,-0.66,0.05,2.48,1.02,0,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","AATTAACATTCTTTTC",6,25.68,8.03,-2.73,0.34,1.5,1,0.04,">1 nonsynonymous","R25D T85S Y93L",3
"lib1","SARS-CoV-2","AATTAACCACAAGCGA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","AATTAACCCAAACAAT",1,33.57,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","L5R V71L G116R E141F L183I",5
"lib1","SARS-CoV-2","AATTAACCGCTACATT",2,1.01,NA,NA,NA,NA,NA,NA,"stop","P82H K132V E141*",3
"lib1","SARS-CoV-2","AATTAACCGTCCATTT",2,6.67,8.17,-2.59,0.32,1.56,1.17,0.04,">1 nonsynonymous","S19E F47L",2
"lib1","SARS-CoV-2","AATTAACCTAGCCTGC",2,38.23,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L F44M C150A N157S",4
"lib1","SARS-CoV-2","AATTAACGAAAAACCA",15,81.31,6.01,-4.76,0.56,1.5,1.17,0.01,">1 nonsynonymous","T46A T85S Y91L F99S",4
"lib1","SARS-CoV-2","AATTAACGATCACTCA",10,746.31,10.67,-0.09,0.03,2.93,1.03,0,"1 nonsynonymous","K132D",1
"lib1","SARS-CoV-2","AATTAACGATTGCGTG",2,25.21,6,-4.76,2,3,1.06,0,">1 nonsynonymous","G83R G101T A145C",3
"lib1","SARS-CoV-2","AATTAACGCAGTCAAA",9,55.81,8.73,-2.03,0.31,1.5,1,0.04,">1 nonsynonymous","N64Y D90G P133R",3
"lib1","SARS-CoV-2","AATTAACGCCATACCT",5,54.69,10.05,-0.72,0.07,2.61,1.07,0,">1 nonsynonymous","F12I G83W N110E",3
"lib1","SARS-CoV-2","AATTAACGCCCAAGAA",6,81.06,10.7,-0.07,0.05,2.95,1.03,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","AATTAACGCGAACGTT",3,18.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51I V77M",2
"lib1","SARS-CoV-2","AATTAACGCGGTGAAG",1,21.58,7.64,-3.13,0.31,1.5,1.13,0.03,">1 nonsynonymous","F62S D90E E141M P149E L162V",5
"lib1","SARS-CoV-2","AATTAACGGTGTTCCG",3,52.51,10.63,-0.14,0.05,2.94,1,0,">1 nonsynonymous","P7N V11F F12L Y35M",4
"lib1","SARS-CoV-2","AATTAACTACCTAGTG",1,16.08,8.53,-2.24,0.19,1.78,1.25,0.01,">1 nonsynonymous","A18N N92C",2
"lib1","SARS-CoV-2","AATTAACTAGAGCCTT",1,20.13,9.62,-1.15,0.07,2.84,1.08,0,">1 nonsynonymous","T148F N157D",2
"lib1","SARS-CoV-2","AATTAACTATAATAAT",2,29.87,8.13,-2.63,0.16,1.79,1.1,0.01,">1 nonsynonymous","V32K N118S Q144T P149F",4
"lib1","SARS-CoV-2","AATTAACTCTTTGTAT",3,0.79,NA,NA,NA,NA,NA,NA,"stop","F44P L95*",2
"lib1","SARS-CoV-2","AATTAACTCTTTTGAA",2,72.7,10.27,-0.49,0.06,2.84,1.03,0,">1 nonsynonymous","P7T D90L",2
"lib1","SARS-CoV-2","AATTAACTGAACTCCT",3,45.21,10.16,-0.6,0.07,2.38,1.02,0,">1 nonsynonymous","T55Y T100G Q163G",3
"lib1","SARS-CoV-2","AATTAACTGAGTGAAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","P7Q Y50S N64P K114H S200*",5
"lib1","SARS-CoV-2","AATTAAGAAGGTGAAT",6,29.08,10.27,-0.5,0.1,2.85,1,0,">1 nonsynonymous","Y66S N171I",2
"lib1","SARS-CoV-2","AATTAAGACCAGACAA",3,60.36,10.64,-0.12,0.07,2.93,1.03,0,"1 nonsynonymous","G83M",1
"lib1","SARS-CoV-2","AATTAAGACGTAATCG",5,94.61,10.77,0.01,0.06,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTAAGACTTCCCCA",12,150.71,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A81L P177K",2
"lib1","SARS-CoV-2","AATTAAGAGCAAAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37D I88D N157T Q163*",4
"lib1","SARS-CoV-2","AATTAAGAGTATCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q A67N T170K",3
"lib1","SARS-CoV-2","AATTAAGAGTCAGCTG",2,20.77,7.87,-2.89,0.19,1.74,1.08,0.02,">1 nonsynonymous","S45V G146M L187N",3
"lib1","SARS-CoV-2","AATTAAGATAAGGGTT",2,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P N40S Q84G K94W T100Y V180Y",6
"lib1","SARS-CoV-2","AATTAAGATCCTTGTT",5,71.29,10.55,-0.22,0.08,2.85,1.06,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","AATTAAGCACAGGTCG",3,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25T C49V Y119T R136Y Q144I F185T",6
"lib1","SARS-CoV-2","AATTAAGCATAAATAG",1,8.81,9.01,-1.76,0.37,1.66,1.38,0.06,">1 nonsynonymous","F17L T140M",2
"lib1","SARS-CoV-2","AATTAAGCGCAGTGCC",3,90.19,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W106L R127N",2
"lib1","SARS-CoV-2","AATTAAGCGGCAGTCG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","F99I A105D S113* D137N",4
"lib1","SARS-CoV-2","AATTAAGGCCCATAAC",3,43.73,10.29,-0.48,0.08,2.8,1.05,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","AATTAAGGGTGAGGTA",4,37.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99S S139F N151F N171M",4
"lib1","SARS-CoV-2","AATTAAGGTGTACCCC",1,68.96,8.55,-2.22,0.19,2.79,1.01,0.01,">1 nonsynonymous","K26L G117E F156R",3
"lib1","SARS-CoV-2","AATTAAGTCGCGAGCT",3,10.47,6,-4.76,2,3,1.05,0,">1 nonsynonymous","V32L I104R",2
"lib1","SARS-CoV-2","AATTAAGTTAGGGATT",6,0,NA,NA,NA,NA,NA,NA,"stop","F99T Y123* R179G",3
"lib1","SARS-CoV-2","AATTAAGTTTAAGGCT",9,23.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R N64W K114H F126T",4
"lib1","SARS-CoV-2","AATTAATAAAATAACT",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136K Q163L",2
"lib1","SARS-CoV-2","AATTAATAAGAAGAAC",5,24.99,9.07,-1.69,0.25,1.66,1.15,0.03,">1 nonsynonymous","T15P L60C W106L",3
"lib1","SARS-CoV-2","AATTAATACATTCAAA",5,70.28,10.78,0.01,0.06,2.91,1.05,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","AATTAATACTTAATGT",3,44.28,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P54A G83K I88T F134L C150A",5
"lib1","SARS-CoV-2","AATTAATAGCAGGTTC",3,44.88,9.71,-1.06,0.14,1.98,1.16,0.01,">1 nonsynonymous","I2F L38N",2
"lib1","SARS-CoV-2","AATTAATATGACAACT",6,14.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C49V I104S Y143K P149G T201W",5
"lib1","SARS-CoV-2","AATTAATCATGCACTG",10,178.21,8.72,-2.05,0.07,2.85,1.06,0,"1 nonsynonymous","G166F",1
"lib1","SARS-CoV-2","AATTAATCGAGTTATA",6,36.03,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","AATTAATCGATATAAC",2,7.98,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E141V Y178G",2
"lib1","SARS-CoV-2","AATTAATCTATAATCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D P54T Y91E A105G K199S",5
"lib1","SARS-CoV-2","AATTAATCTTTTACAA",11,3.12,NA,NA,NA,NA,NA,NA,"stop","V37L L122Q K128* T148I T201K",5
"lib1","SARS-CoV-2","AATTAATGAAACACGA",4,46.4,6.29,-4.47,0.55,1.5,1.19,0.03,">1 nonsynonymous","F12L W23R V52M P96K V115R T201L",6
"lib1","SARS-CoV-2","AATTAATGCCCGAAGT",1,14.74,9.44,-1.33,0.14,2.72,1.22,0.01,">1 nonsynonymous","C61S G146Q",2
"lib1","SARS-CoV-2","AATTAATGGATGAAAA",10,26.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L D97F",2
"lib1","SARS-CoV-2","AATTAATGTATCCACC",3,45.29,10.01,-0.75,0.11,2.44,1,0.01,">1 nonsynonymous","E10I F47M",2
"lib1","SARS-CoV-2","AATTAATTAAATAAAC",5,24.51,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","F8R D34Y I104D G116E",4
"lib1","SARS-CoV-2","AATTAATTACAATTCA",4,17.35,8.99,-1.78,0.17,1.8,1.19,0.01,">1 nonsynonymous","N4V C61W A81S N120V",4
"lib1","SARS-CoV-2","AATTAATTACTGTACG",5,116.93,10.11,-0.66,0.04,2.93,1.03,0,">1 nonsynonymous","T148S F156S",2
"lib1","SARS-CoV-2","AATTAATTATAAAACA",6,21.1,8.24,-2.52,0.36,1.5,1.07,0.04,">1 nonsynonymous","C31H S139Y S200F",3
"lib1","SARS-CoV-2","AATTAATTTCCTCTAC",5,108.41,10.12,-0.65,0.06,2.59,1.02,0,">1 nonsynonymous","G9H W106K",2
"lib1","SARS-CoV-2","AATTACAAAAAAGAAG",2,31.7,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6S V37R K94Y Q144H V173D Y178F",6
"lib1","SARS-CoV-2","AATTACAAAAATCATT",5,78.61,10.76,-0.01,0.06,2.9,1.07,0,"1 nonsynonymous","P197A",1
"lib1","SARS-CoV-2","AATTACAAAGAATACG",3,1.55,NA,NA,NA,NA,NA,NA,"stop","F12E K26* T100E",3
"lib1","SARS-CoV-2","AATTACAAATTTAAGA",4,61.51,7.84,-2.93,0.12,1.6,1.11,0,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","AATTACAACCAATACA",5,167.79,10.45,-0.32,0.05,2.83,1.06,0,"1 nonsynonymous","D59A",1
"lib1","SARS-CoV-2","AATTACAACTAACGAG",5,141.12,9.07,-1.7,0.06,2.63,1.12,0,">1 nonsynonymous","S41H G117R E141T S164K",4
"lib1","SARS-CoV-2","AATTACAAGACGTTCT",4,34.92,10.69,-0.07,0.12,2.94,1.04,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","AATTACAAGATACACA",9,65.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6L C49Y N58F D90V D97F K128F I138F",7
"lib1","SARS-CoV-2","AATTACAAGCTATCGT",5,83.44,7.48,-3.28,0.26,1.5,1.18,0.02,">1 nonsynonymous","S19L S147D S164T Y178F",4
"lib1","SARS-CoV-2","AATTACAATCCCTGAT",5,0.4,NA,NA,NA,NA,NA,NA,"stop","S41* G146E",2
"lib1","SARS-CoV-2","AATTACAATGAGATAG",2,64.11,8.26,-2.5,0.12,2.56,1.11,0,">1 nonsynonymous","N1S Y175L",2
"lib1","SARS-CoV-2","AATTACACAATAAAAT",4,16.07,7.38,-3.39,0.36,1.5,1.08,0.04,">1 nonsynonymous","N13S A89T G146I Y178L V180F",5
"lib1","SARS-CoV-2","AATTACACACCACTAG",3,17.27,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A89W F99Q V103R Y119H L131Y",5
"lib1","SARS-CoV-2","AATTACACAGATTCCA",2,19.78,10.28,-0.48,0.06,2.93,1,0,">1 nonsynonymous","A42T C61W",2
"lib1","SARS-CoV-2","AATTACACAGCTTATT",9,117.23,8.43,-2.34,0.18,1.89,1.07,0.01,">1 nonsynonymous","N13Y N64Q Y119L",3
"lib1","SARS-CoV-2","AATTACACATCAACCG",1,26.15,10.71,-0.05,0.09,2.86,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTACACATTGTTCT",4,104.17,9.64,-1.13,0.05,2.79,1.06,0,">1 nonsynonymous","I2C K56E R73L",3
"lib1","SARS-CoV-2","AATTACACGTGGACCG",1,8.77,6,-4.76,2,3,1.02,0,">1 nonsynonymous","A33R F44E R78S I142D Y165L Q176V A190H",7
"lib1","SARS-CoV-2","AATTACAGAATAAGAT",4,147.9,8.19,-2.57,0.14,2.39,1.11,0.01,">1 nonsynonymous","L60Y K94N G117N F156L",4
"lib1","SARS-CoV-2","AATTACAGAGACATAT",9,25.68,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N24T G86S T148R V182G",4
"lib1","SARS-CoV-2","AATTACAGAGCCACGA",3,21.71,10.54,-0.22,0.07,2.96,1.05,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","AATTACAGATAAATTC",3,21.96,9.8,-0.96,0.14,1.78,1.13,0.01,">1 nonsynonymous","A42T P82T",2
"lib1","SARS-CoV-2","AATTACAGCCGCACGC",2,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V G101S P169F L183R K198P",5
"lib1","SARS-CoV-2","AATTACATAAACATTA",1,18.8,9.45,-1.31,0.16,1.99,1.08,0.01,">1 nonsynonymous","D75E L95M F160H E186I",4
"lib1","SARS-CoV-2","AATTACATAATAGTGG",6,55.25,6.36,-4.4,0.64,1.5,1.16,0.03,">1 nonsynonymous","F8W T85M C158R G166K",4
"lib1","SARS-CoV-2","AATTACATATATACAT",2,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R D34I S41Y P96K F99L Q163M",6
"lib1","SARS-CoV-2","AATTACATCGCCTGAC",7,1.06,NA,NA,NA,NA,NA,NA,"stop","Q84* Y119E",2
"lib1","SARS-CoV-2","AATTACATGGACAACA",3,43.98,10.56,-0.21,0.07,2.89,1.03,0,">1 nonsynonymous","D75S D90S",2
"lib1","SARS-CoV-2","AATTACATTAATACCC",1,30.37,10.62,-0.15,0.1,2.87,1.08,0,">1 nonsynonymous","A33T K198Q",2
"lib1","SARS-CoV-2","AATTACATTGGACGTT",1,37.68,10.03,-0.73,0.13,2.45,1.01,0.01,">1 nonsynonymous","R25S P191T",2
"lib1","SARS-CoV-2","AATTACCAATGAACCA",3,0.22,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib1","SARS-CoV-2","AATTACCAGTATTTAA",2,33.73,10.62,-0.14,0.06,2.83,1.13,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","AATTACCCCAATCCAA",4,64.34,8.59,-2.18,0.14,2.34,1.1,0.01,">1 nonsynonymous","T55D N118I S129F",3
"lib1","SARS-CoV-2","AATTACCGCTCACACC",1,18.65,10.76,-0.01,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTACCTCTTCAAAC",1,51.55,10.16,-0.61,0.07,2.75,1.02,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","AATTACGATGATACGG",3,31.4,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","V77W A89E F99S A105Q P149E Y178V",6
"lib1","SARS-CoV-2","AATTACGCATTAATAA",7,172.08,9.61,-1.15,0.06,2.86,1.06,0,"1 nonsynonymous","F156C",1
"lib1","SARS-CoV-2","AATTACGGACACTAAC",4,41.25,8.96,-1.81,0.21,1.5,1,0.02,">1 nonsynonymous","A14F K56Q D90H",3
"lib1","SARS-CoV-2","AATTACGGATCCTTAC",5,40.35,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T63A A105M E135L",3
"lib1","SARS-CoV-2","AATTACGTAAATTCGG",5,71.58,10.58,-0.18,0.06,2.89,1.07,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","AATTACGTAGAAAAAT",1,10.28,9.49,-1.27,0.12,2.74,1.16,0.01,"1 nonsynonymous","N109Y",1
"lib1","SARS-CoV-2","AATTACGTCTTATAAA",2,6.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36D D75F P82V",3
"lib1","SARS-CoV-2","AATTACGTTTAGGAAG",2,21.87,10.07,-0.69,0.12,2.11,1,0.01,">1 nonsynonymous","R16L F44S P54S",3
"lib1","SARS-CoV-2","AATTACTAAGACTTAA",3,0.41,NA,NA,NA,NA,NA,NA,"stop","T46K R124* Y143L N157S N171M",5
"lib1","SARS-CoV-2","AATTACTAGGAGGTAT",1,20.75,10.64,-0.13,0.09,2.9,1,0,">1 nonsynonymous","L5Q K48L K114H",3
"lib1","SARS-CoV-2","AATTACTATTACAAAA",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32S L122P E135M",3
"lib1","SARS-CoV-2","AATTACTATTCCGCGT",17,2.59,NA,NA,NA,NA,NA,NA,"stop","A33* N110F T170M",3
"lib1","SARS-CoV-2","AATTACTATTTACTAA",2,6.24,6,-4.76,2,1.5,1.45,0.04,">1 nonsynonymous","L5V S41K S45F G155P E186S K198N",6
"lib1","SARS-CoV-2","AATTACTCTGACAGTA",16,256.74,10.19,-0.58,0.04,2.85,1.01,0,">1 nonsynonymous","S36L F47V C61M I104Y T140H",5
"lib1","SARS-CoV-2","AATTACTGTCCACACT",4,71.55,8.21,-2.56,0.23,1.5,1.13,0.02,">1 nonsynonymous","F62K D97A E135I",3
"lib1","SARS-CoV-2","AATTACTTATACGTTA",2,11.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C102S Y119F N130M",3
"lib1","SARS-CoV-2","AATTACTTCAAAAAAT",4,32.95,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y39N D59R F99I W106S P161S",5
"lib1","SARS-CoV-2","AATTACTTCACCAAGA",4,102.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86T A105F",2
"lib1","SARS-CoV-2","AATTACTTCTAAATTA",2,3.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","AATTACTTCTAATATG",5,0.74,NA,NA,NA,NA,NA,NA,"stop","N13L Y35* Y143K F160V P169R",5
"lib1","SARS-CoV-2","AATTACTTTCACTCCA",4,27.67,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S19M G86W",2
"lib1","SARS-CoV-2","AATTAGAAAAAAATAC",2,81.96,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E10L S36T F62Q T100P F134T Q176L",6
"lib1","SARS-CoV-2","AATTAGAAAACCTAAT",3,10.43,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S108P G155C",2
"lib1","SARS-CoV-2","AATTAGAAAGCATCCT",3,29.92,6.06,-4.7,0.77,1.5,1.17,0.02,">1 nonsynonymous","G9Y A18S K48T D75N N92C N120S P149R",7
"lib1","SARS-CoV-2","AATTAGAACCACCAAT",2,53.3,10.79,0.02,0.07,2.94,1.01,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","AATTAGAAGAGTTAAC",3,8.85,6,-4.76,2,1.5,1.1,0.08,">1 nonsynonymous","S129I V182Y",2
"lib1","SARS-CoV-2","AATTAGAAGTGTGTGG",3,3.72,NA,NA,NA,NA,NA,NA,"stop","G9* K94G",2
"lib1","SARS-CoV-2","AATTAGAATATACTAA",6,0.17,NA,NA,NA,NA,NA,NA,"stop","C31S V37* T85C W106*",4
"lib1","SARS-CoV-2","AATTAGACAGGCATCT",1,0.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATTAGACGATCCTAA",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L E10L G51L L60R P96K",5
"lib1","SARS-CoV-2","AATTAGACGCAACGCT",4,21.51,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S29G F44N Y91F D98Y C158Q",5
"lib1","SARS-CoV-2","AATTAGACTAGGCTAA",5,19.05,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","D34I K87S D97H Y143P",4
"lib1","SARS-CoV-2","AATTAGATAATAAACA",5,25.31,9.11,-1.66,0.2,1.5,1.11,0.02,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","AATTAGATCAAACGTT",2,11.4,10.67,-0.09,0.16,2.85,1.09,0.01,">1 nonsynonymous","A18S K87I",2
"lib1","SARS-CoV-2","AATTAGATGGGAACTT",2,22.68,9.81,-0.95,0.09,1.99,1.1,0,">1 nonsynonymous","N13L L38M P149T",3
"lib1","SARS-CoV-2","AATTAGATTAATTCGT",5,77.27,9.74,-1.03,0.2,1.8,1.08,0.02,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","AATTAGCAAAACGAAA",5,26.82,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R124Q G166V",2
"lib1","SARS-CoV-2","AATTAGCAACTCAAAA",3,0.66,NA,NA,NA,NA,NA,NA,"stop","Y39L L57* V77L Y119L C158F",5
"lib1","SARS-CoV-2","AATTAGCAAGATTAAA",3,12.96,9.89,-0.87,0.3,1.5,1.04,0.05,">1 nonsynonymous","K94F E141K",2
"lib1","SARS-CoV-2","AATTAGCAATCTGTAC",2,66.29,10.01,-0.75,0.05,2.93,1.01,0,">1 nonsynonymous","N110Y L125V",2
"lib1","SARS-CoV-2","AATTAGCAATTGCATG",3,53.66,6.11,-4.66,0.54,1.64,1.17,0.01,">1 nonsynonymous","P82G F167Y",2
"lib1","SARS-CoV-2","AATTAGCAGAAGGCTG",1,7.39,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","A14I A33P I80R A89T Y119W G172W",6
"lib1","SARS-CoV-2","AATTAGCCAAATAATC",3,23.27,10.77,0.01,0.08,2.98,1.02,0,">1 nonsynonymous","P149Y T201M",2
"lib1","SARS-CoV-2","AATTAGCCTGTATATC",5,61.67,10.82,0.06,0.09,2.97,1.01,0,"1 nonsynonymous","S43W",1
"lib1","SARS-CoV-2","AATTAGCGTGAAAAAG",1,16.66,10.61,-0.16,0.08,2.89,1.09,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AATTAGCTAAACGATA",10,125.67,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y35A V65E I88M K128Y",4
"lib1","SARS-CoV-2","AATTAGGAAACGTTCT",4,24.77,9.49,-1.27,0.16,1.83,1.07,0.01,">1 nonsynonymous","I88L E141I",2
"lib1","SARS-CoV-2","AATTAGGAAACTTTCA",8,112.36,9.4,-1.36,0.11,1.88,1.17,0.01,"1 nonsynonymous","Y165N",1
"lib1","SARS-CoV-2","AATTAGGCCATCAACC",2,42.54,9.84,-0.93,0.09,2.39,1,0,">1 nonsynonymous","A14K N30E N58M",3
"lib1","SARS-CoV-2","AATTAGGCTCGGCCAG",2,7.27,8.49,-2.27,0.28,1.77,1,0.02,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","AATTAGGGCAAACACG",3,90.68,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","I2P A14M A22G S36V D75I Y119P",6
"lib1","SARS-CoV-2","AATTAGGGGCCGATTC",6,594.2,10.77,0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTAGGGTTTTGGAA",3,9.07,10.04,-0.72,0.06,2.91,1.03,0,">1 nonsynonymous","T100Y I142Q",2
"lib1","SARS-CoV-2","AATTAGGTCAAATCGG",2,15.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T63C K94V S129R L162T",4
"lib1","SARS-CoV-2","AATTAGTAAACAGCTA",1,18.6,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G51I W106P F167L T170Q Y178S",5
"lib1","SARS-CoV-2","AATTAGTAATAGCAAC",3,26.06,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","A105S S113Y Y178L",3
"lib1","SARS-CoV-2","AATTAGTACCCCACGT",2,57.78,10.63,-0.13,0.04,2.91,1.01,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","AATTAGTATAAGTCAG",1,21.46,6.08,-4.69,0.57,1.53,1.1,0.01,">1 nonsynonymous","E10S R25G P54F F99S G174T",5
"lib1","SARS-CoV-2","AATTAGTGCTCACCAA",2,45.31,10.28,-0.48,0.04,2.83,1.08,0,">1 nonsynonymous","C61K R127K",2
"lib1","SARS-CoV-2","AATTAGTTAATCACTT",7,1.31,NA,NA,NA,NA,NA,NA,"stop","D98* L122K P149N Y178T",4
"lib1","SARS-CoV-2","AATTAGTTACACCTAG",3,20.48,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","N30L C49S C61R K128F N151K",5
"lib1","SARS-CoV-2","AATTAGTTCATATATC",3,42.32,9.12,-1.64,0.19,1.5,1.1,0.02,">1 nonsynonymous","R27F L38S",2
"lib1","SARS-CoV-2","AATTAGTTTATTATCA",2,20.34,10.7,-0.06,0.09,2.99,1,0.01,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","AATTAGTTTCCGAGGC",3,18.34,10.43,-0.33,0.07,3,1,0,">1 nonsynonymous","P7L C61H",2
"lib1","SARS-CoV-2","AATTATAAATATAATT",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L T15D I80W Y165M",4
"lib1","SARS-CoV-2","AATTATAAATTATGAG",3,9.22,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F47L I142N Y165V",3
"lib1","SARS-CoV-2","AATTATAACATAAGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D97Q E141* G155S",3
"lib1","SARS-CoV-2","AATTATAACCTATTTA",2,36.67,8.68,-2.08,0.28,1.5,1.17,0.03,">1 nonsynonymous","Y35S Y121V T140R",3
"lib1","SARS-CoV-2","AATTATAACGTATATA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","W23* Q163P",2
"lib1","SARS-CoV-2","AATTATAAGAGACCAT",7,37.73,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","F70L D90R A105S",3
"lib1","SARS-CoV-2","AATTATAAGTCTAACT",3,1.29,NA,NA,NA,NA,NA,NA,"stop","T55C Y93C G174*",3
"lib1","SARS-CoV-2","AATTATAATGACCGCG",1,0.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATTATAATTAACTCA",6,65.8,8.38,-2.38,0.22,1.75,1.16,0.02,">1 nonsynonymous","G9M Y39P Y121R G174A T201M",5
"lib1","SARS-CoV-2","AATTATAATTGAACGA",8,2.63,NA,NA,NA,NA,NA,NA,"stop","A14G D97C V103* R124M G174R",5
"lib1","SARS-CoV-2","AATTATACAATGCTGA",4,34.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4V N92W S108I T140Q V153P",5
"lib1","SARS-CoV-2","AATTATACACCATTGC",5,56.33,6.36,-4.4,0.52,1.5,1.12,0.02,">1 nonsynonymous","C6P N107L F134G F167V",4
"lib1","SARS-CoV-2","AATTATACACGAGGTG",1,23.32,6,-4.76,2,2.52,1.16,0,">1 nonsynonymous","A14S L122E Y159K A192E",4
"lib1","SARS-CoV-2","AATTATACCATACTAA",4,54.7,6.3,-4.46,0.62,1.5,1.24,0.02,">1 nonsynonymous","C61S S113L K128S P149N",4
"lib1","SARS-CoV-2","AATTATACCATGAACA",9,3.61,NA,NA,NA,NA,NA,NA,"stop","I28* F62* D137C K198A",4
"lib1","SARS-CoV-2","AATTATACGAACGATC",5,9.25,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F99C S147A",2
"lib1","SARS-CoV-2","AATTATACGAGCCGAG",11,7.29,9.19,-1.58,0.27,2.24,1.4,0.03,">1 nonsynonymous","Y39S N64W G86L K94L T100S R127P T201Y",7
"lib1","SARS-CoV-2","AATTATACGCGCTCAT",4,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95P S113Y G152T",3
"lib1","SARS-CoV-2","AATTATACGGGTCACG",4,55.5,10.47,-0.3,0.06,2.89,1.02,0,"1 nonsynonymous","T15M",1
"lib1","SARS-CoV-2","AATTATACTGCAATAA",1,41.68,6,-4.76,1.74,3,1.18,0,">1 nonsynonymous","N107I F156D",2
"lib1","SARS-CoV-2","AATTATACTGCCTTCC",1,5.36,10.73,-0.04,0.38,2.6,1.13,0.03,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","AATTATACTTACCAAC",3,111.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D97I C158I",2
"lib1","SARS-CoV-2","AATTATAGAAGTGAGT",2,47.55,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","V103Q Y165G",2
"lib1","SARS-CoV-2","AATTATAGGTAGAGGC",4,101.22,10.73,-0.04,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTATAGTTAAATAA",7,500.71,10.47,-0.3,0.03,2.94,1.01,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","AATTATAGTTTTCCAG",1,53.36,10.26,-0.5,0.06,2.94,1.02,0,">1 nonsynonymous","N4Q A14R L60Q",3
"lib1","SARS-CoV-2","AATTATATAATCATTT",2,148.58,9.9,-0.87,0.1,2.05,1.03,0,">1 nonsynonymous","P7T T46L T100N N120Y",4
"lib1","SARS-CoV-2","AATTATATACAATGCA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","N40H K94* K128Y",3
"lib1","SARS-CoV-2","AATTATATTGAACCTT",3,53.18,10.73,-0.03,0.07,2.94,1.04,0,"1 nonsynonymous","V52F",1
"lib1","SARS-CoV-2","AATTATCAACAGAATA",3,58.36,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","AATTATCATAGCTGAA",2,46.85,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F62Y G117A R136T G155R",4
"lib1","SARS-CoV-2","AATTATCATGAGTGAC",5,1.93,NA,NA,NA,NA,NA,NA,"stop","I28L S41A D98* W106A V115W",5
"lib1","SARS-CoV-2","AATTATCCTCTATATT",2,22.05,7.49,-3.27,0.47,1.5,1,0.07,">1 nonsynonymous","I28V G172R",2
"lib1","SARS-CoV-2","AATTATCCTGGTTCGC",3,0.09,NA,NA,NA,NA,NA,NA,"stop","G9L R73P F99* N157G",4
"lib1","SARS-CoV-2","AATTATCGCCCTCAAA",2,14.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E T148V F160M",3
"lib1","SARS-CoV-2","AATTATCTTGATTGCA",6,27.81,10.8,0.04,0.04,2.96,1.02,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AATTATGAAAATCCAC",3,32.65,10.67,-0.09,0.11,2.9,1.1,0,">1 nonsynonymous","Q84M D98T T201V",3
"lib1","SARS-CoV-2","AATTATGACTCAAAGC",3,9.1,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C61N N92L P149S N157R",4
"lib1","SARS-CoV-2","AATTATGAGACACCCG",3,14.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103E S129T",2
"lib1","SARS-CoV-2","AATTATGAGGCAGGTT",5,43.02,10.81,0.04,0.06,2.95,1.02,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","AATTATGATGTATAAA",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L S41D N120C S129L A192M",5
"lib1","SARS-CoV-2","AATTATGATTGAGATG",12,6.42,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9V W106E Y175M",3
"lib1","SARS-CoV-2","AATTATGCAGGAAACA",3,21.27,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S45C T55V D75R N92F T100L",5
"lib1","SARS-CoV-2","AATTATGCCCACCCAA",2,14.03,10.8,0.04,0.09,2.89,1.07,0,"1 nonsynonymous","T148Q",1
"lib1","SARS-CoV-2","AATTATGCGAAAGACA",1,80.3,9.69,-1.08,0.08,2.77,1.02,0,">1 nonsynonymous","I104V Q176H",2
"lib1","SARS-CoV-2","AATTATGCGAACTGAG",2,35.53,10.73,-0.04,0.06,2.97,1,0,">1 nonsynonymous","V37S N64P",2
"lib1","SARS-CoV-2","AATTATGCTGATAATA",6,31.34,7.55,-3.21,0.29,1.5,1.05,0.03,">1 nonsynonymous","F12D A89V",2
"lib1","SARS-CoV-2","AATTATGGAAAGCTGG",2,0.55,NA,NA,NA,NA,NA,NA,"stop","D59V D137E G146T P177*",4
"lib1","SARS-CoV-2","AATTATGGACACAGGA",4,48.88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K26M V71G P82K T100Y T201I",5
"lib1","SARS-CoV-2","AATTATGGACCTTGAG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","N1* K87D",2
"lib1","SARS-CoV-2","AATTATGGGCCTCACC",2,36.39,10.3,-0.46,0.06,2.87,1.01,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","AATTATGTAGCAATTA",1,16.66,9.08,-1.68,0.09,2.85,1.14,0,"1 nonsynonymous","F156D",1
"lib1","SARS-CoV-2","AATTATGTCTTAGAGC",3,15.93,10.9,0.14,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTATGTTGTCCCTT",4,62.99,10.38,-0.39,0.05,2.95,1.02,0,">1 nonsynonymous","G83A K114N",2
"lib1","SARS-CoV-2","AATTATTAACCTATAC",1,11.29,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9V T148P Y165T K198M",4
"lib1","SARS-CoV-2","AATTATTACAGATACT",5,41.32,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5M S36N F99C N107F",4
"lib1","SARS-CoV-2","AATTATTAGATGTATA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","G9V W106C F160*",3
"lib1","SARS-CoV-2","AATTATTAGCCCTGTA",3,92.33,6.1,-4.66,0.41,1.5,1.13,0.01,">1 nonsynonymous","A14T P82S F167P",3
"lib1","SARS-CoV-2","AATTATTAGTCAAGAG",2,14.63,7.29,-3.47,0.36,1.5,1.01,0.06,">1 nonsynonymous","F12T R136L G146L P161F",4
"lib1","SARS-CoV-2","AATTATTATGACACAA",5,137.44,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K56P S129C P177G V182L",4
"lib1","SARS-CoV-2","AATTATTATGGTAGAA",1,0.53,NA,NA,NA,NA,NA,NA,"stop","D90I Y143L P177*",3
"lib1","SARS-CoV-2","AATTATTCCCACGACG",5,31.03,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G9P A14Y N58I A105E L122I",5
"lib1","SARS-CoV-2","AATTATTCTGATGATG",1,30.15,10.82,0.06,0.08,2.76,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTATTGAATATATA",9,91.63,10.12,-0.65,0.09,2.4,1,0,">1 nonsynonymous","S36V R127S",2
"lib1","SARS-CoV-2","AATTATTGGTGCGTGA",4,61.07,7.42,-3.34,0.22,1.5,1.15,0.01,">1 nonsynonymous","Y39Q D112K L122Q",3
"lib1","SARS-CoV-2","AATTATTGTATAGGAA",3,22.86,10.8,0.04,0.04,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTATTTAAATCATA",1,19.96,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8M A14T D137E P149R V153E",5
"lib1","SARS-CoV-2","AATTATTTGGTTCAGC",2,8.01,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","I72K N107E",2
"lib1","SARS-CoV-2","AATTATTTTATGCATA",3,39.6,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G101A W106C",2
"lib1","SARS-CoV-2","AATTCAAAAAAACAAT",2,26.22,8.23,-2.53,0.41,1.5,1,0.05,">1 nonsynonymous","K26G L60C D90M",3
"lib1","SARS-CoV-2","AATTCAAAAAACAGTG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","E10M A81* Y119V S129V Y143V E154* F167*",7
"lib1","SARS-CoV-2","AATTCAAAAAAGTGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","T3A G9L P133C T140*",4
"lib1","SARS-CoV-2","AATTCAAAAACGCACC",11,37.11,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","E76W Q84S V181K",3
"lib1","SARS-CoV-2","AATTCAAAAGCATTCC",3,14.84,8.7,-2.06,0.14,2.86,1.04,0,">1 nonsynonymous","D90C Y119P E154L",3
"lib1","SARS-CoV-2","AATTCAAAAGTAAAGA",5,151.6,10.12,-0.64,0.07,2.29,1.02,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","AATTCAAACGCGAGTG",2,23.67,9.77,-0.99,0.28,1.5,1,0.04,">1 nonsynonymous","N4I W106S",2
"lib1","SARS-CoV-2","AATTCAAACGCTGCGC",1,65.52,10.8,0.03,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTCAAAGAAGAACA",3,33.87,10.89,0.13,0.32,2.31,1,0.03,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","AATTCAAAGATTCATA",12,94.32,6,-4.76,1.22,1.5,1.22,0.03,">1 nonsynonymous","N64G K94H R127P I138D",4
"lib1","SARS-CoV-2","AATTCAAATGGCAACT",6,90.26,10.51,-0.25,0.12,2.67,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATTCAACAATACACC",6,100.35,10.78,0.01,0.07,2.88,1.08,0,">1 nonsynonymous","Y35W S200L",2
"lib1","SARS-CoV-2","AATTCAACATGGCTGG",3,80.85,10.36,-0.41,0.06,2.82,1.05,0,">1 nonsynonymous","G9L A33Y A89T",3
"lib1","SARS-CoV-2","AATTCAAGAAGTCTAT",7,94.71,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S29L I72H D90C N107S",4
"lib1","SARS-CoV-2","AATTCAAGACATTGAT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L S129R",2
"lib1","SARS-CoV-2","AATTCAAGCCCAAACC",2,27.42,9.85,-0.91,0.13,2.57,1.04,0.01,">1 nonsynonymous","N24K S45C G116W",3
"lib1","SARS-CoV-2","AATTCAAGGATAGAAC",2,12.49,10.75,-0.01,0.16,2.8,1.08,0.02,">1 nonsynonymous","T100L T201K",2
"lib1","SARS-CoV-2","AATTCAAGGCGTCTCT",13,156.21,8.63,-2.14,0.11,2.39,1.13,0,">1 nonsynonymous","C6T A145R",2
"lib1","SARS-CoV-2","AATTCAAGTAACCCTG",4,26.97,10.84,0.07,0.09,2.9,1,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","AATTCAAGTCACCGAA",5,202.72,6.05,-4.71,0.69,1.5,1.19,0.01,">1 nonsynonymous","P149S C158W",2
"lib1","SARS-CoV-2","AATTCAATCACGTGAA",3,32.02,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","I80Q",1
"lib1","SARS-CoV-2","AATTCAATTAAGCAAA",2,38.36,6.18,-4.58,1.12,1.5,1.3,0.04,">1 nonsynonymous","D97S N107Y Q168R",3
"lib1","SARS-CoV-2","AATTCAATTGACCCCT",1,24.36,6,-4.76,1.43,1.5,1.14,0.01,">1 nonsynonymous","A42P S53G C61M P161V",4
"lib1","SARS-CoV-2","AATTCAATTTGTCCCA",2,14.24,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","P82L V182L",2
"lib1","SARS-CoV-2","AATTCACAACATATTC",1,65.67,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T15A S53V G116P R136V Y175K",5
"lib1","SARS-CoV-2","AATTCACACAGCTATA",1,8.28,10.64,-0.13,0.08,2.88,1.07,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","AATTCACACTAACTCA",1,16.34,10.73,-0.04,0.04,2.96,1,0,">1 nonsynonymous","V37L D97L S164V",3
"lib1","SARS-CoV-2","AATTCACAGAAAGATA",5,60.26,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12N Y35P R73C",3
"lib1","SARS-CoV-2","AATTCACAGACATGTA",1,19.3,10.24,-0.52,0.08,2.74,1.04,0,"1 nonsynonymous","C6I",1
"lib1","SARS-CoV-2","AATTCACATAGGTACG",7,79.79,10.3,-0.46,0.07,2.84,1.01,0,">1 nonsynonymous","S36V N58S N64T T100C E154S",5
"lib1","SARS-CoV-2","AATTCACATGACGCAA",1,55.64,9.95,-0.82,0.03,2.8,1.03,0,">1 nonsynonymous","Y39W K87R S129G S139L",4
"lib1","SARS-CoV-2","AATTCACATTAATTCA",3,37.81,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V37S W106R Q144I P177M V182P",5
"lib1","SARS-CoV-2","AATTCACCAAGATGAA",8,53.38,10.7,-0.07,0.05,2.93,1.07,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","AATTCACCTATCGCCG",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98Q S113V",2
"lib1","SARS-CoV-2","AATTCACCTGTAATGA",5,56.47,10.77,0,0.09,2.96,1.02,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","AATTCACCTTAAACAA",3,0.32,NA,NA,NA,NA,NA,NA,"stop","S41* T55V",2
"lib1","SARS-CoV-2","AATTCACTGACTAGAA",1,15.84,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","F44I F99P A105R K128R T170M",5
"lib1","SARS-CoV-2","AATTCAGAAAAAGCAC",5,63,10.74,-0.02,0.08,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCAGAAAGACAGC",1,20.37,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I104Y D112I Y123P",3
"lib1","SARS-CoV-2","AATTCAGACTAGTACA",4,33.54,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44E T55H F62R C102W A190G S200L",6
"lib1","SARS-CoV-2","AATTCAGATACCCCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","A33* D75G",2
"lib1","SARS-CoV-2","AATTCAGATGATTTAC",10,122.26,10.3,-0.47,0.04,2.89,1.01,0,">1 nonsynonymous","A14I I142V",2
"lib1","SARS-CoV-2","AATTCAGATTTTAGCC",10,32.77,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","W23K T63M D90M",3
"lib1","SARS-CoV-2","AATTCAGCCTAGAATC",1,50.53,10.73,-0.03,0.04,2.92,1.04,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","AATTCAGGATTCATAT",2,25.3,10.48,-0.29,0.06,2.8,1.12,0,">1 nonsynonymous","A18S E135H T201K",3
"lib1","SARS-CoV-2","AATTCAGGCTGATATG",3,25.22,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N1V N13Y V37S K94S F99N",5
"lib1","SARS-CoV-2","AATTCATACCGTTAAA",4,25.04,9.9,-0.86,0.14,2.5,1.08,0.01,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","AATTCATAGGACGTTC",4,79.06,10.17,-0.6,0.07,2.94,1,0,">1 nonsynonymous","F44E K87M",2
"lib1","SARS-CoV-2","AATTCATAGGCTTATT",6,46.91,9.34,-1.43,0.18,1.82,1.15,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","AATTCATATAGAATAA",8,30.16,6.17,-4.6,1.18,1.5,1.15,0.05,">1 nonsynonymous","K56C W106R R124N",3
"lib1","SARS-CoV-2","AATTCATATATTTCGT",1,43.1,9.96,-0.8,0.07,2.8,1.06,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","AATTCATATGAAACAA",4,18.7,9.91,-0.85,0.15,2.69,1.02,0.01,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","AATTCATATTACGTTT",2,12.34,9.67,-1.09,0.14,2.87,1.04,0.01,">1 nonsynonymous","K87Q G174S",2
"lib1","SARS-CoV-2","AATTCATCACCTGCGG",5,43.81,9.91,-0.85,0.09,2.4,1.08,0,">1 nonsynonymous","G9V N107A V173R",3
"lib1","SARS-CoV-2","AATTCATCACGACACA",3,2.67,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","AATTCATCTAAAGTGA",4,39.19,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N107F Y119V P169C T201L",4
"lib1","SARS-CoV-2","AATTCATCTATATATA",8,126.12,9.12,-1.65,0.15,1.63,1.14,0.01,">1 nonsynonymous","C6V N40T K56D N64W K198S",5
"lib1","SARS-CoV-2","AATTCATCTTGAATTC",2,30.19,9.72,-1.04,0.14,2.07,1.03,0.01,">1 nonsynonymous","A81T Y91M",2
"lib1","SARS-CoV-2","AATTCATTAAAACTGC",2,140.86,10.28,-0.48,0.05,2.89,1.01,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","AATTCATTAAGCAGCT",5,73.86,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99G K198A",2
"lib1","SARS-CoV-2","AATTCATTATAACTTT",8,90.72,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L60N I88G P96K Y119T I138L",5
"lib1","SARS-CoV-2","AATTCATTGGCAACCA",2,89.76,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","Y39K L125K G146Y V153M",4
"lib1","SARS-CoV-2","AATTCCAACAGGCCTT",1,36.4,10.63,-0.13,0.05,2.95,1,0,"1 nonsynonymous","K128I",1
"lib1","SARS-CoV-2","AATTCCAACCCAATCT",5,17.92,8.05,-2.72,0.29,1.5,1.11,0.03,">1 nonsynonymous","N4D G51P C61P Y175F",4
"lib1","SARS-CoV-2","AATTCCAAGTAACATC",1,2.99,NA,NA,NA,NA,NA,NA,"stop","N24H E141M Q163* P177K",4
"lib1","SARS-CoV-2","AATTCCAGAGCTCAAA",7,81.65,10.42,-0.34,0.04,2.95,1.03,0,">1 nonsynonymous","T3F K56Q T85V P149K",4
"lib1","SARS-CoV-2","AATTCCAGATTTGAGA",1,29.41,10.37,-0.4,0.06,2.75,1.08,0,">1 nonsynonymous","L60V Y123V",2
"lib1","SARS-CoV-2","AATTCCAGCCGTTCCA",5,33.6,10.76,-0.01,0.08,2.86,1.05,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","AATTCCAGGAGCAACA",2,11,10.05,-0.72,0.17,2.72,1,0.01,"1 nonsynonymous","L38Y",1
"lib1","SARS-CoV-2","AATTCCATGAGCGTGC",6,124.45,9.82,-0.94,0.09,1.95,1.09,0,">1 nonsynonymous","W106C L122N",2
"lib1","SARS-CoV-2","AATTCCATGGTTAAAG",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73G I88L K94N I104T S129V",5
"lib1","SARS-CoV-2","AATTCCCACGACTTGC",6,60.55,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N58K G83A R124H G155M T170K",5
"lib1","SARS-CoV-2","AATTCCCACGCTGTCT",4,0.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","AATTCCCCACCCTCGT",1,77.81,10.22,-0.54,0.06,2.69,1.03,0,">1 nonsynonymous","A81S L187P",2
"lib1","SARS-CoV-2","AATTCCCCACTCTCCA",2,7.7,6,-4.76,2,1.5,1.14,0.08,">1 nonsynonymous","L60N A81S C102S S113K",4
"lib1","SARS-CoV-2","AATTCCCTACTGTAAG",1,6.95,10.52,-0.25,0.32,2.35,1,0.02,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","AATTCCCTGCATATGG",2,138.72,9.32,-1.44,0.06,2.82,1.11,0,">1 nonsynonymous","S19P S43G K87C T170S K198S",5
"lib1","SARS-CoV-2","AATTCCCTTGCCTTCG",4,66.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L P161R",2
"lib1","SARS-CoV-2","AATTCCCTTTAGTGAC",8,40.38,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A22Q Q84H W106K F167D",4
"lib1","SARS-CoV-2","AATTCCGAATGGGGTT",6,89.41,9.52,-1.25,0.12,2.44,1.14,0.01,">1 nonsynonymous","C6Y S19P I104L",3
"lib1","SARS-CoV-2","AATTCCGATTAAGCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C L60D",2
"lib1","SARS-CoV-2","AATTCCGCCCCGGTAT",8,95.39,7.83,-2.94,0.14,1.89,1.1,0.01,">1 nonsynonymous","K87G P161T",2
"lib1","SARS-CoV-2","AATTCCGCGACTCTCG",1,0.26,NA,NA,NA,NA,NA,NA,"stop","V37R S53E N118*",3
"lib1","SARS-CoV-2","AATTCCGCGGAAAACC",2,45.81,6.94,-3.83,0.36,1.5,1.21,0.03,">1 nonsynonymous","Y50N K87S T193A",3
"lib1","SARS-CoV-2","AATTCCGGGATAGAAT",3,3.56,NA,NA,NA,NA,NA,NA,"stop","S36* I72F K132R",3
"lib1","SARS-CoV-2","AATTCCGGTAAAAATT",2,51.4,10.74,-0.02,0.04,2.99,1,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","AATTCCGTATGAAGCA",7,79.72,6.15,-4.62,0.63,1.5,1.15,0.01,">1 nonsynonymous","P7L K94I P177W",3
"lib1","SARS-CoV-2","AATTCCGTCCTTACGT",1,18.29,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V37T K48M V71R G155C",4
"lib1","SARS-CoV-2","AATTCCGTCTTAAGAA",1,6.15,6.06,-4.71,1.39,1.5,1.16,0.06,">1 nonsynonymous","V37M S113L K128W E135H",4
"lib1","SARS-CoV-2","AATTCCTAAAGGAAAT",18,175.51,9.95,-0.81,0.09,2.08,1.05,0,">1 nonsynonymous","R27F V65H T140R",3
"lib1","SARS-CoV-2","AATTCCTACGTTAAGG",6,170.85,10.02,-0.74,0.04,2.87,1.04,0,">1 nonsynonymous","T85R L125P",2
"lib1","SARS-CoV-2","AATTCCTCAAAATACA",9,1.33,NA,NA,NA,NA,NA,NA,"stop","A22I G83S V103P E135R E154* G174S",6
"lib1","SARS-CoV-2","AATTCCTGACCTGCTT",7,65.07,6.36,-4.4,0.63,1.5,1.18,0.03,">1 nonsynonymous","N30K F44G P96R S139Q",4
"lib1","SARS-CoV-2","AATTCCTGCTACCAAG",4,48.67,6,-4.76,2,3,1.11,0,">1 nonsynonymous","P7E R73T F99L C150D",4
"lib1","SARS-CoV-2","AATTCCTTAAATAACA",1,34.39,7.75,-3.01,0.42,1.5,1,0.06,">1 nonsynonymous","N4A T55I V173N R179L",4
"lib1","SARS-CoV-2","AATTCGAAAAAATGGA",2,16.97,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","P82V D90P P161W Q168K",4
"lib1","SARS-CoV-2","AATTCGAACAAAGAAA",8,48.83,8.75,-2.01,0.25,1.5,1.13,0.03,">1 nonsynonymous","L5M N40F F62S Q84I A89S L122S E186P",7
"lib1","SARS-CoV-2","AATTCGAAGGCTTAGA",1,1.99,NA,NA,NA,NA,NA,NA,"stop","N109D N118L Q168*",3
"lib1","SARS-CoV-2","AATTCGAATGATCACG",1,18.12,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N13I G86F R136A",3
"lib1","SARS-CoV-2","AATTCGAATTCATATC",1,16.01,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N64D D90S P96L R136Y",4
"lib1","SARS-CoV-2","AATTCGACGTTATCAA",4,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P N107G",2
"lib1","SARS-CoV-2","AATTCGAGTACCACAA",5,17.44,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F99S S113I I138P V182L T201R",5
"lib1","SARS-CoV-2","AATTCGCAATGCTTAA",1,35.66,10.68,-0.09,0.07,2.97,1,0,">1 nonsynonymous","A42K N58T",2
"lib1","SARS-CoV-2","AATTCGCACGCCACCA",2,16.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49E Y119C E135G",3
"lib1","SARS-CoV-2","AATTCGCATCAAACAT",1,155.95,9.55,-1.22,0.06,2.76,1.07,0,">1 nonsynonymous","R16K L57V Y119R",3
"lib1","SARS-CoV-2","AATTCGCCACTTCTCA",1,35.35,10.81,0.05,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCGCTACATAGGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATTCGCTACCGAGAT",3,49.47,10.55,-0.22,0.05,2.93,1,0,">1 nonsynonymous","T15N A33W N64R",3
"lib1","SARS-CoV-2","AATTCGGATCCGTATT",6,63.55,7.91,-2.85,0.19,1.63,1.13,0.01,">1 nonsynonymous","C61T Y91K N109Y",3
"lib1","SARS-CoV-2","AATTCGGGCCAAGACG",7,264.3,7.27,-3.5,0.16,1.59,1.15,0.01,"1 nonsynonymous","Q168P",1
"lib1","SARS-CoV-2","AATTCGGGTTTAGGAC",5,133.1,10.72,-0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCGGTTCTCTAAT",4,29.97,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T3I F17M Y35F G86E",4
"lib1","SARS-CoV-2","AATTCGTACCTATGAC",7,75.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I D90Y",2
"lib1","SARS-CoV-2","AATTCGTATAATTCGC",11,15.54,6.39,-4.37,0.58,3,1.25,0.04,">1 nonsynonymous","D34H S45C S113F K199L",4
"lib1","SARS-CoV-2","AATTCGTCCTATTCGT",1,20.84,10.75,-0.02,0.06,2.97,1,0,">1 nonsynonymous","G83Y E154A",2
"lib1","SARS-CoV-2","AATTCGTGAATTATAC",1,26.18,9.47,-1.29,0.14,2.7,1.07,0.01,">1 nonsynonymous","K87T N107T S200Q",3
"lib1","SARS-CoV-2","AATTCGTGACAAATAG",9,212.53,10.73,-0.04,0.04,2.95,1.02,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","AATTCTAAAAAAAACG",5,17.93,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","V77L Y121R T148K G152C",4
"lib1","SARS-CoV-2","AATTCTAAAAAGCATT",5,19.03,10.01,-0.75,0.11,2.52,1.07,0.01,">1 nonsynonymous","F62Y A105V L122G",3
"lib1","SARS-CoV-2","AATTCTAACTAACCCA",6,28.92,10.67,-0.09,0.06,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCTAAGACTCTGT",9,92,6,-4.76,1.34,1.5,1.22,0.02,">1 nonsynonymous","N58V N120S F134P",3
"lib1","SARS-CoV-2","AATTCTAAGCGAGTCG",12,147.85,10.75,-0.02,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCTAATTACAGAG",5,24.48,9.43,-1.33,0.12,2.21,1.23,0.01,"1 nonsynonymous","A105N",1
"lib1","SARS-CoV-2","AATTCTACAAAACAGG",8,64.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V32S F99D S113W N120P",4
"lib1","SARS-CoV-2","AATTCTACAAAGAATA",3,7.46,10.76,-0.01,0.17,2.99,1.05,0.01,"1 nonsynonymous","N130K",1
"lib1","SARS-CoV-2","AATTCTACCACCGAAA",5,36.71,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I88G L131V",2
"lib1","SARS-CoV-2","AATTCTACCTAAGATT",4,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L D90P V103D Q168K",4
"lib1","SARS-CoV-2","AATTCTACGTATTAAG",6,110.72,10.38,-0.38,0.08,2.74,1.04,0,">1 nonsynonymous","L5A N24L",2
"lib1","SARS-CoV-2","AATTCTATATCAGGGG",4,14.46,6,-4.76,1.21,1.5,1.28,0.03,"1 nonsynonymous","I88S",1
"lib1","SARS-CoV-2","AATTCTATCAATTTAG",2,31.47,10.4,-0.36,0.09,2.75,1.02,0,">1 nonsynonymous","P82I L122R",2
"lib1","SARS-CoV-2","AATTCTATGCTACGAA",9,150.4,10.64,-0.12,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTCTCACTAAGCAA",1,20.44,6.11,-4.65,1.36,1.5,1.3,0.06,">1 nonsynonymous","S29F N58R N151C R179M",4
"lib1","SARS-CoV-2","AATTCTCCCCACGAGT",1,32.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G86D N107E K114T Y123V E154D A190Y",6
"lib1","SARS-CoV-2","AATTCTCGCCGCTTTG",4,0.5,NA,NA,NA,NA,NA,NA,"stop","S45* G86S P149A V180F",4
"lib1","SARS-CoV-2","AATTCTCGTACCCTAT",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L I72Y V173I",3
"lib1","SARS-CoV-2","AATTCTCTAACGCCCG",7,137.54,10.78,0.01,0.08,2.93,1.04,0,"1 nonsynonymous","T46Y",1
"lib1","SARS-CoV-2","AATTCTGACGCGGTAT",10,14.32,NA,NA,NA,NA,NA,NA,"stop","P54C G74V N92* F160T",4
"lib1","SARS-CoV-2","AATTCTGCCAAGTAAC",1,18.16,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K56C C61L P96R V103D S129H",5
"lib1","SARS-CoV-2","AATTCTTATAAGGAAA",3,34.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N N120S N157T",3
"lib1","SARS-CoV-2","AATTCTTATGTCCACT",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31M V37G S53R W106E E135V P149K",6
"lib1","SARS-CoV-2","AATTCTTGAATCCTAT",6,124.51,6.68,-4.08,0.37,1.5,1.14,0.02,">1 nonsynonymous","F12C T55V D98H T140R",4
"lib1","SARS-CoV-2","AATTCTTGCAAATAGT",2,13.09,9.21,-1.55,0.16,2.62,1.14,0.01,">1 nonsynonymous","R27I G146F K198R",3
"lib1","SARS-CoV-2","AATTCTTGTACATACG",3,128.34,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","P177W",1
"lib1","SARS-CoV-2","AATTCTTGTGGTTGAT",9,0.9,NA,NA,NA,NA,NA,NA,"stop","I28* N110V",2
"lib1","SARS-CoV-2","AATTCTTTGAACGAAG",14,140.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6V L60T I88F P96R Q176H",5
"lib1","SARS-CoV-2","AATTGAAAAAATCGCA",3,22.02,10.23,-0.53,0.18,2.45,1,0.01,"1 nonsynonymous","W23P",1
"lib1","SARS-CoV-2","AATTGAAAAATACTGT",2,16.71,10.79,0.03,0.13,2.68,1.08,0.01,"1 nonsynonymous","V153Q",1
"lib1","SARS-CoV-2","AATTGAAAAATCCTAA",4,21.08,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N58H P82Q D90L P96F S139N C150F T170Y",7
"lib1","SARS-CoV-2","AATTGAAACATCAGAA",1,52.11,10.94,0.17,0.1,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGAAACGATTCCC",6,50.49,6,-4.76,1.76,1.5,1.24,0.02,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","AATTGAAACGCGCCTA",1,25.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R124G N157Y",2
"lib1","SARS-CoV-2","AATTGAAACTATTCAG",2,31.81,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P7T F62G G146V E154M Q168D A190E T201C",7
"lib1","SARS-CoV-2","AATTGAAATAAAGGGA",3,13.06,10.72,-0.04,0.09,2.91,1.08,0,"1 nonsynonymous","E141N",1
"lib1","SARS-CoV-2","AATTGAAATCAATTCC",5,29.77,6,-4.76,0.97,1.5,1.07,0.01,">1 nonsynonymous","Y39H D90M Y121S P169M",4
"lib1","SARS-CoV-2","AATTGAACATAACTTG",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V Y91Q F99N V173R K198R",5
"lib1","SARS-CoV-2","AATTGAACGTATACGA",2,64.67,6.05,-4.71,0.76,1.5,1.18,0.01,">1 nonsynonymous","F12A N157W",2
"lib1","SARS-CoV-2","AATTGAAGACCCGCAA",4,50.01,8.92,-1.85,0.09,1.85,1.07,0,">1 nonsynonymous","Y35E G152Y F160P",3
"lib1","SARS-CoV-2","AATTGAAGCCCAAAAA",9,69.39,7.64,-3.13,0.42,1.5,1.03,0.05,">1 nonsynonymous","N4S C102T",2
"lib1","SARS-CoV-2","AATTGAAGGATCTAAA",7,268.05,10.59,-0.17,0.04,2.92,1.03,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","AATTGAAGTATCAGCA",2,9.93,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","K114Y P161Y H189F",3
"lib1","SARS-CoV-2","AATTGAAGTGCTACGG",9,159.87,10.76,0,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGAATATTCTCCT",3,25.98,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","F17D K56G Y119M T170F",4
"lib1","SARS-CoV-2","AATTGAATGCTAGTGG",2,30.12,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45L S113Y L122T P177F",4
"lib1","SARS-CoV-2","AATTGAATTCGAAAAG",4,44.55,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A105K S113E Y143A T201A",4
"lib1","SARS-CoV-2","AATTGACATGCTCGGG",4,49.79,6,-4.76,1.42,1.5,1.12,0.01,">1 nonsynonymous","I28Q Y143G Y159V",3
"lib1","SARS-CoV-2","AATTGACCATAATACG",4,40.13,6,-4.76,1.8,1.5,1.24,0.02,">1 nonsynonymous","A89R S139V",2
"lib1","SARS-CoV-2","AATTGACCGCACACTT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","C6S C61Y D90* Y119Q P133K",5
"lib1","SARS-CoV-2","AATTGACCGGAGACAG",1,3.44,NA,NA,NA,NA,NA,NA,"stop","E10N K56* W106G Y121F R179V",5
"lib1","SARS-CoV-2","AATTGACCTAGGACAC",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49W K94I Y119F",3
"lib1","SARS-CoV-2","AATTGACGTATGGTGG",2,7.06,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N64C E76Y A81K",3
"lib1","SARS-CoV-2","AATTGACGTTCTGTAT",10,59.51,10.7,-0.06,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGACTCACGATGA",6,90.27,10.63,-0.13,0.04,2.91,1.04,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","AATTGAGAAACAAGAC",1,25.18,10.85,0.09,0.1,2.9,1.04,0,"1 nonsynonymous","V153R",1
"lib1","SARS-CoV-2","AATTGAGAGGAAGCCA",1,7.13,10.58,-0.18,0.25,2.65,1.27,0.01,">1 nonsynonymous","K94H I104F",2
"lib1","SARS-CoV-2","AATTGAGATTAATCCC",1,84.07,10.26,-0.51,0.04,2.82,1.03,0,">1 nonsynonymous","A33F K56T S69N K114N F134H",5
"lib1","SARS-CoV-2","AATTGAGCATAATAAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M T55L F62V G83V",4
"lib1","SARS-CoV-2","AATTGAGCGTTGGACT",5,33.05,6.13,-4.63,0.97,1.5,1.2,0.03,">1 nonsynonymous","S29G Y159R G166D",3
"lib1","SARS-CoV-2","AATTGAGGAAATGTTG",3,63.96,10.69,-0.07,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGAGGAATGAAAA",1,40.52,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","F12H R27S V37I F126L G166V",5
"lib1","SARS-CoV-2","AATTGAGTTAATCTGG",1,40.29,10.54,-0.23,0.06,2.9,1,0,">1 nonsynonymous","I142V N151T",2
"lib1","SARS-CoV-2","AATTGATAAATCAGAA",4,26.33,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","F99E",1
"lib1","SARS-CoV-2","AATTGATAGCTTGTGT",1,58.59,9.7,-1.06,0.06,2.85,1.04,0,">1 nonsynonymous","G117A S200V",2
"lib1","SARS-CoV-2","AATTGATATGAGGTCG",4,54.09,10.55,-0.22,0.06,2.95,1,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","AATTGATATTAAGATA",10,1.65,NA,NA,NA,NA,NA,NA,"stop","K48Q K56P I88W N92* L122S",5
"lib1","SARS-CoV-2","AATTGATATTAGAAAC",3,62.88,7.7,-3.07,0.31,1.5,1.09,0.04,">1 nonsynonymous","W23M D59K C195H",3
"lib1","SARS-CoV-2","AATTGATGCAGCGTTG",4,5.56,NA,NA,NA,NA,NA,NA,"stop","D68K D98*",2
"lib1","SARS-CoV-2","AATTGATTACTGGATG",4,108.73,9.99,-0.78,0.1,2.26,1.03,0,">1 nonsynonymous","Y50T K199C",2
"lib1","SARS-CoV-2","AATTGATTTTCTCTCG",7,68.16,10.86,0.1,0.09,2.85,1.06,0,"1 nonsynonymous","A192V",1
"lib1","SARS-CoV-2","AATTGCAACCAAAGAA",2,69.25,7.56,-3.2,0.16,2.01,1.16,0.01,">1 nonsynonymous","S129G C158S",2
"lib1","SARS-CoV-2","AATTGCAAGAAACCCT",2,36.1,10.59,-0.18,0.28,1.78,1.03,0.05,">1 nonsynonymous","K48I S69K D90H D112R",4
"lib1","SARS-CoV-2","AATTGCAATGTTTTGT",3,82.45,9.89,-0.87,0.04,2.92,1,0,">1 nonsynonymous","Y119K T201C",2
"lib1","SARS-CoV-2","AATTGCACAGCTGAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R N107K",2
"lib1","SARS-CoV-2","AATTGCACCTACAACA",2,89.62,10.13,-0.64,0.09,2.65,1,0,"1 nonsynonymous","D34I",1
"lib1","SARS-CoV-2","AATTGCAGGTAAACAG",1,7.16,9.2,-1.56,0.3,2.37,1.32,0.02,"1 nonsynonymous","P161C",1
"lib1","SARS-CoV-2","AATTGCATCCTGCGAA",18,177.35,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R16H Y50T K94M",3
"lib1","SARS-CoV-2","AATTGCATGTCTCACG",2,12.22,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V37E N92E E135K V173I",4
"lib1","SARS-CoV-2","AATTGCATTTCACAAG",2,15.98,6.48,-4.28,0.27,1.5,1.09,0.01,">1 nonsynonymous","D90V G146M",2
"lib1","SARS-CoV-2","AATTGCCAAAAATAAA",6,4.09,NA,NA,NA,NA,NA,NA,"stop","A33* T85V P96L F126D Y143G P149I V173L",7
"lib1","SARS-CoV-2","AATTGCCAAGGCCGAC",1,22.25,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V11N R25A P177A",3
"lib1","SARS-CoV-2","AATTGCCACACGGGCA",2,14.99,10.64,-0.12,0.13,2.74,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATTGCCAGTATCGCA",2,39.94,10.22,-0.55,0.12,2.03,1.02,0.01,">1 nonsynonymous","L38T C61I N171V",3
"lib1","SARS-CoV-2","AATTGCCCATAAGTAA",2,8.82,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","E10P F47I Y91P L125I",4
"lib1","SARS-CoV-2","AATTGCCCCATATACA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","C49T D97L Q176*",3
"lib1","SARS-CoV-2","AATTGCCCGAATAATA",1,77.03,10.33,-0.43,0.05,2.82,1.03,0,">1 nonsynonymous","N107A T201M",2
"lib1","SARS-CoV-2","AATTGCCCTGTACCAG",2,6.86,10.67,-0.1,0.09,2.87,1.11,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","AATTGCCGCTACAATC",1,22.24,9.05,-1.72,0.17,2.02,1.08,0.01,">1 nonsynonymous","P7H L57C E154C",3
"lib1","SARS-CoV-2","AATTGCCTATAATGAG",1,51.89,10.88,0.11,0.08,2.95,1.02,0,">1 nonsynonymous","K128N E141D",2
"lib1","SARS-CoV-2","AATTGCCTCACAGATA",3,27.37,6,-4.76,1.15,1.5,1.15,0.01,">1 nonsynonymous","F12Y I88S K94T",3
"lib1","SARS-CoV-2","AATTGCCTTTCTATAC",2,9.27,6,-4.76,2,3,1.1,0.03,"1 nonsynonymous","L95Y",1
"lib1","SARS-CoV-2","AATTGCGATTGCAACG",2,9.48,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A33T F44W G51C Q84H N110M N120Y",6
"lib1","SARS-CoV-2","AATTGCGGGAGAGTCT",8,149.7,10.53,-0.23,0.04,2.91,1.04,0,">1 nonsynonymous","T140V N171S",2
"lib1","SARS-CoV-2","AATTGCGGTCGAGGTG",11,52.68,8.77,-1.99,0.13,1.5,1.1,0.01,">1 nonsynonymous","T100A P133L",2
"lib1","SARS-CoV-2","AATTGCGTCCCTCTCG",10,91.62,9.24,-1.52,0.11,1.76,1.13,0,">1 nonsynonymous","L5T S43P D137S F160S",4
"lib1","SARS-CoV-2","AATTGCTATACAAACC",1,31.85,10.04,-0.72,0.23,1.69,1.03,0.02,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","AATTGCTATCATTAGA",3,2.48,NA,NA,NA,NA,NA,NA,"stop","E10* G86L",2
"lib1","SARS-CoV-2","AATTGCTCAGACATCC",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91E L122R C158P",3
"lib1","SARS-CoV-2","AATTGCTCCGAATCAG",3,19,9.54,-1.23,0.13,1.82,1.12,0.01,">1 nonsynonymous","G51C F160I",2
"lib1","SARS-CoV-2","AATTGCTGACTGAACT",3,50.47,9.11,-1.66,0.15,1.84,1.15,0.01,">1 nonsynonymous","F99L G174W",2
"lib1","SARS-CoV-2","AATTGCTGTACTGATC",2,17.7,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","D98F A105K",2
"lib1","SARS-CoV-2","AATTGGAAACTATCTG",3,9.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A42V T85A I88R T148W P161R",5
"lib1","SARS-CoV-2","AATTGGAAAGAACCCT",2,51.16,10.85,0.09,0.05,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTGGAACGAAACTA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N C102K N118P",3
"lib1","SARS-CoV-2","AATTGGACCCACGAAC",5,74.88,10.69,-0.07,0.05,2.88,1.03,0,">1 nonsynonymous","T46V G83M",2
"lib1","SARS-CoV-2","AATTGGACTTATCACA",5,53.67,10.53,-0.24,0.07,2.85,1.04,0,"1 nonsynonymous","G116F",1
"lib1","SARS-CoV-2","AATTGGATCTACTAAT",3,75.82,10.55,-0.21,0.06,2.83,1.05,0,">1 nonsynonymous","D98Y T140Q",2
"lib1","SARS-CoV-2","AATTGGCAAAAAATGT",2,74.56,10.31,-0.45,0.05,2.93,1,0,">1 nonsynonymous","F8L K87I V173H",3
"lib1","SARS-CoV-2","AATTGGCAAAATACTT",10,53.01,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N13L V65M T170I",3
"lib1","SARS-CoV-2","AATTGGCAAATTAAAA",3,51.22,9.44,-1.33,0.05,2.89,1.09,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","AATTGGCACAAATAAA",3,18.34,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C31V R73I L183K",3
"lib1","SARS-CoV-2","AATTGGCAGTAGTGGA",2,47.81,7.57,-3.2,0.24,1.5,1.03,0.02,">1 nonsynonymous","A14M Y143N T193A",3
"lib1","SARS-CoV-2","AATTGGCAGTGAACTA",4,36.81,10.73,-0.04,0.04,2.95,1.01,0,">1 nonsynonymous","L5T D98H",2
"lib1","SARS-CoV-2","AATTGGCGAGCTTGAT",10,57.15,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A14S I88K L125P Y175S",4
"lib1","SARS-CoV-2","AATTGGCTCTTCGTCT",4,14.18,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","N1T F44C P54I I88T T100V S113T G152D",7
"lib1","SARS-CoV-2","AATTGGCTTATCCAGA",3,28.62,10.45,-0.31,0.08,2.9,1.03,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","AATTGGGAATTAACTA",3,9.59,10.9,0.14,0.1,2.9,1.07,0,"1 nonsynonymous","Q144N",1
"lib1","SARS-CoV-2","AATTGGGACGGTAACC",2,33.39,7.13,-3.63,0.43,1.86,1.17,0.04,">1 nonsynonymous","G86W G166A",2
"lib1","SARS-CoV-2","AATTGGGACGTGGAGC",5,65.9,9.19,-1.57,0.08,2.85,1.1,0,">1 nonsynonymous","G83L N120P",2
"lib1","SARS-CoV-2","AATTGGGAGACAGCAG",2,38.11,10.79,0.02,0.04,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGGGTACCTTGAT",8,11.25,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3Y S41L D59Y T85M Q144F",5
"lib1","SARS-CoV-2","AATTGGGTCATAACTA",1,19.85,6,-4.76,1.38,1.5,1.09,0.01,">1 nonsynonymous","G9M S36E T63H Q84L D90G E141S P177K",7
"lib1","SARS-CoV-2","AATTGGTACCTTATCA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V77* G83I Q163V T201Q",4
"lib1","SARS-CoV-2","AATTGGTCAACCACTG",3,22.23,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L95R S129K L162C",3
"lib1","SARS-CoV-2","AATTGGTCAAGTCCAT",9,91.02,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I2V N118V N120S R124M K198N",5
"lib1","SARS-CoV-2","AATTGTAACCACCTAT",4,116.39,10.01,-0.76,0.06,2.84,1,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","AATTGTAAGACCCTGA",2,6.8,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","C31V G51P Q84C F156C S164N",5
"lib1","SARS-CoV-2","AATTGTAATATAAATG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATTGTACATCGCAGG",7,63.98,10.86,0.1,0.08,2.95,1.05,0,"1 nonsynonymous","T85H",1
"lib1","SARS-CoV-2","AATTGTACGTGAAGAA",9,56.44,10.65,-0.11,0.07,2.88,1.07,0,"1 nonsynonymous","E10K",1
"lib1","SARS-CoV-2","AATTGTACTCCAGAGT",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120L T170L S184L",3
"lib1","SARS-CoV-2","AATTGTATTTAAAATA",2,0.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","AATTGTCAAACCCCGG",4,95.41,10.14,-0.63,0.09,2.64,1.05,0,">1 nonsynonymous","Y39L W106T",2
"lib1","SARS-CoV-2","AATTGTCAAGCACCAT",2,36.71,10.85,0.09,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGTCACGCAGACA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","C31P D98N L122I F134* G174F",5
"lib1","SARS-CoV-2","AATTGTCCGCAACTCA",12,316.7,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","AATTGTCCTTGAGGAG",8,249.77,9.7,-1.06,0.09,1.85,1.07,0,"1 nonsynonymous","V173T",1
"lib1","SARS-CoV-2","AATTGTCGCTATCGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S53V K87Y G101D V153P S200*",5
"lib1","SARS-CoV-2","AATTGTCTAAAACAAT",7,14.38,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A42F D68K K87A Y121P L131G",5
"lib1","SARS-CoV-2","AATTGTCTACCCCCTA",4,122.12,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86M N107P K132T I142G",4
"lib1","SARS-CoV-2","AATTGTGAGATCGCAT",1,24.44,10.86,0.1,0.16,2.91,1.06,0.01,">1 nonsynonymous","K56Q S113A",2
"lib1","SARS-CoV-2","AATTGTGAGGATGTAA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","W106* L122S V153L",3
"lib1","SARS-CoV-2","AATTGTGTCCTAAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","P7A D68* Y121F G146N",4
"lib1","SARS-CoV-2","AATTGTTAAGGATTAT",2,19.52,6,-4.76,2,1.5,1.28,0.08,">1 nonsynonymous","A42L Y91S D112R L188H",4
"lib1","SARS-CoV-2","AATTGTTAATAAACAT",2,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70S A105Y S113Y N157Y",4
"lib1","SARS-CoV-2","AATTGTTACAAACTTA",1,62.48,10.77,0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTGTTACAGAAAGC",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38H S53A K94M",3
"lib1","SARS-CoV-2","AATTGTTAGAAAAAAC",6,0,NA,NA,NA,NA,NA,NA,"stop","N1V P7G V37H D98*",4
"lib1","SARS-CoV-2","AATTGTTCATTATCAT",2,9.63,10.5,-0.27,0.09,3,1,0,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","AATTGTTGGAGACGAA",4,98.38,10.77,0.01,0.05,2.94,1.02,0,">1 nonsynonymous","V37C L95V P197S",3
"lib1","SARS-CoV-2","AATTGTTGGCAGCCCG",3,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S N64F V103L",3
"lib1","SARS-CoV-2","AATTGTTTACAAGCTA",3,92.08,10.79,0.03,0.07,2.86,1.07,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","AATTGTTTTGCCGGCG",7,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V V65W V103C",3
"lib1","SARS-CoV-2","AATTTAAAAAACAAGC",1,4.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P197H",1
"lib1","SARS-CoV-2","AATTTAAAAAAGGATA",5,54.54,10.84,0.07,0.07,2.86,1.08,0,">1 nonsynonymous","P149K V153A",2
"lib1","SARS-CoV-2","AATTTAAAAATCTTAG",10,115.55,8.49,-2.27,0.15,1.77,1.17,0.01,">1 nonsynonymous","D97V N107V N151D",3
"lib1","SARS-CoV-2","AATTTAAAAATTGGAA",1,16.77,6.44,-4.33,0.57,1.5,1.09,0.04,">1 nonsynonymous","A81T V103W",2
"lib1","SARS-CoV-2","AATTTAAAAGAACACA",4,55.63,8.29,-2.47,0.23,1.67,1.18,0.01,">1 nonsynonymous","S29R N64L K94S Y119N",4
"lib1","SARS-CoV-2","AATTTAAAAGGCCGAG",3,52.08,10.13,-0.63,0.1,2.77,1.08,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","AATTTAAAATAACTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","AATTTAAACTATATAT",7,38.26,6.06,-4.71,0.96,1.5,1.21,0.03,">1 nonsynonymous","T46S K87S L95S K198S",4
"lib1","SARS-CoV-2","AATTTAAAGACCAGAC",2,17.59,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","P96R C150L F160H A192V",4
"lib1","SARS-CoV-2","AATTTAAAGGAAACTG",7,98.63,10.7,-0.07,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTAAATAAATCGG",4,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29L L38P P96I",3
"lib1","SARS-CoV-2","AATTTAAATGATTTGC",1,35.78,10.23,-0.54,0.09,2.74,1,0,">1 nonsynonymous","R127K I142L",2
"lib1","SARS-CoV-2","AATTTAAATGTTTCGC",1,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M G101E S200T",3
"lib1","SARS-CoV-2","AATTTAAATTCAGCAC",3,83.54,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S43K W106Q Y175K",3
"lib1","SARS-CoV-2","AATTTAACAAAATGTG",5,16.26,11.03,0.27,0.1,2.86,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTAACAATTCTTA",1,14.98,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","V20L T170P",2
"lib1","SARS-CoV-2","AATTTAACACCTGAAC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","F134R G174*",2
"lib1","SARS-CoV-2","AATTTAACAGGTCCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136V V153H",2
"lib1","SARS-CoV-2","AATTTAACATGTTCTT",15,83.82,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35S A89M F126N E141Q",4
"lib1","SARS-CoV-2","AATTTAACCAAAAGAA",2,86.91,9.98,-0.79,0.09,2.43,1.01,0,">1 nonsynonymous","G51H K56R T63I A105S L188R",5
"lib1","SARS-CoV-2","AATTTAACCCATAAAC",6,56.2,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S29W G51N S129P D137W",4
"lib1","SARS-CoV-2","AATTTAACGGCTTAAA",4,1.76,NA,NA,NA,NA,NA,NA,"stop","Y66D N107Y K114M K132* L162S",5
"lib1","SARS-CoV-2","AATTTAACTACAGTAC",5,54.94,10.53,-0.23,0.06,2.94,1.02,0,"1 nonsynonymous","T46D",1
"lib1","SARS-CoV-2","AATTTAACTTATGATT",3,17.49,10.73,-0.04,0.05,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTAACTTTGGTAA",1,15.16,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N4R Y121R Y165H",3
"lib1","SARS-CoV-2","AATTTAAGAGACCAAA",5,9.88,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G86V F99Y R179L T201Q",4
"lib1","SARS-CoV-2","AATTTAAGATATTGAC",1,23.24,10.65,-0.11,0.07,2.93,1,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","AATTTAAGCCAGCATG",8,148.63,10.51,-0.25,0.03,2.89,1.03,0,">1 nonsynonymous","T3R D97H I104Y Q168A",4
"lib1","SARS-CoV-2","AATTTAAGCCGATATG",5,96.29,10.3,-0.46,0.03,2.84,1.05,0,">1 nonsynonymous","D90Y P149S",2
"lib1","SARS-CoV-2","AATTTAAGCGAACAAA",5,65.84,10.71,-0.06,0.04,2.86,1.07,0,"1 nonsynonymous","K132Y",1
"lib1","SARS-CoV-2","AATTTAAGGCAACACG",3,85.85,6,-4.76,1.73,1.5,1.17,0.01,">1 nonsynonymous","F8G S45T N107H",3
"lib1","SARS-CoV-2","AATTTAAGGCGGATTA",2,6.05,6.6,-4.16,0.23,1.5,1.03,0.01,">1 nonsynonymous","L5R Y123D S129H",3
"lib1","SARS-CoV-2","AATTTAAGTGACGAAA",2,41.3,9.75,-1.01,0.07,2.76,1.04,0,">1 nonsynonymous","G9V S36R N64Q F156Y",4
"lib1","SARS-CoV-2","AATTTAATCTCCATTC",2,28.78,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","E10R W23A C49A",3
"lib1","SARS-CoV-2","AATTTAATCTGAGTTT",3,26.33,10.82,0.05,0.09,2.89,1.07,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","AATTTAATGTGCAAAA",1,13.5,10.91,0.14,0.1,2.86,1.1,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","AATTTAATTGAAAATA",6,41.49,9.89,-0.87,0.32,1.5,1,0.05,"1 nonsynonymous","I104K",1
"lib1","SARS-CoV-2","AATTTACAAGCTCAAC",2,91.59,10.4,-0.37,0.05,2.87,1.02,0,">1 nonsynonymous","R27L R78H S139A",3
"lib1","SARS-CoV-2","AATTTACACACCCTGC",2,55.31,8.13,-2.63,0.19,1.88,1.13,0.01,"1 nonsynonymous","S139P",1
"lib1","SARS-CoV-2","AATTTACACCACTATC",1,6.75,8.46,-2.3,0.18,1.62,1.07,0.01,">1 nonsynonymous","L5P D137W",2
"lib1","SARS-CoV-2","AATTTACCACACTTTC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","C6L C61W G86* P96L K198C",5
"lib1","SARS-CoV-2","AATTTACCATCGCTTT",2,11.01,6,-4.76,0.48,1.5,1.01,0,">1 nonsynonymous","K87P L95G D98E",3
"lib1","SARS-CoV-2","AATTTACCCCATAAAA",3,33.86,7.11,-3.66,0.4,1.5,1.21,0.04,">1 nonsynonymous","Y93F V103D L122R T140Q",4
"lib1","SARS-CoV-2","AATTTACCCTAAATAG",4,7.22,7.69,-3.08,0.39,1.5,1.19,0.04,">1 nonsynonymous","F8K S41W N110W",3
"lib1","SARS-CoV-2","AATTTACCGGGAAAGT",7,58.72,9.7,-1.06,0.12,1.82,1.05,0.01,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","AATTTACGACGTTCTT",2,5.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34F",1
"lib1","SARS-CoV-2","AATTTACGATTTTCGC",3,25.54,9.18,-1.59,0.2,1.71,1.18,0.02,">1 nonsynonymous","S19R A33P",2
"lib1","SARS-CoV-2","AATTTACGCCGATTAG",2,40.75,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","I2M L5P F12D A105F",4
"lib1","SARS-CoV-2","AATTTACGTAATCATT",1,7.87,9.53,-1.24,0.22,2.42,1,0.02,">1 nonsynonymous","I2A Q176R",2
"lib1","SARS-CoV-2","AATTTACTCAGAAATG",5,100.31,10.05,-0.71,0.06,2.71,1.02,0,">1 nonsynonymous","N30S N58Y S139T",3
"lib1","SARS-CoV-2","AATTTACTTGAGCGAG",6,65.79,10.77,0.01,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTAGAAATTGAGT",6,28.27,8.6,-2.17,0.15,1.91,1.14,0.01,">1 nonsynonymous","E10D A14N N107D",3
"lib1","SARS-CoV-2","AATTTAGAAGTCCTTA",4,108.28,10.85,0.09,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AATTTAGAATAACGCG",5,33.28,10.78,0.02,0.07,2.93,1.02,0,">1 nonsynonymous","N4Q K48N",2
"lib1","SARS-CoV-2","AATTTAGAGTAGCTTT",3,11.09,6.49,-4.28,0.59,2.01,1.09,0.05,">1 nonsynonymous","T3A S41E R78M K87Q W106A F156Y",6
"lib1","SARS-CoV-2","AATTTAGCGATTCCGA",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S Q84D D90Y D97R V103G S129T E135K",7
"lib1","SARS-CoV-2","AATTTAGCGCAATTTT",4,17.02,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","Y50F Y91T D112V Q144R P149R P197Q",6
"lib1","SARS-CoV-2","AATTTAGCGCCGAGGA",4,26.75,10.71,-0.06,0.07,2.81,1.07,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","AATTTAGCTTATGGAG",3,2.44,NA,NA,NA,NA,NA,NA,"stop","Y21K G86* L122Q V180F",4
"lib1","SARS-CoV-2","AATTTAGGAATAAATA",14,51.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35V C61W G83T D90L V103G G116E K128E T170H",8
"lib1","SARS-CoV-2","AATTTAGGCAAAACAA",2,45.22,10.7,-0.06,0.08,2.85,1.08,0,"1 nonsynonymous","A190N",1
"lib1","SARS-CoV-2","AATTTAGGGCCACTAA",1,29.86,10.71,-0.06,0.11,2.81,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AATTTAGGGGAACAAC",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T L38Q K56W",3
"lib1","SARS-CoV-2","AATTTAGTTAAGAACC",2,32.31,9.92,-0.85,0.13,2.17,1.03,0.01,"1 nonsynonymous","K94F",1
"lib1","SARS-CoV-2","AATTTAGTTAGCAACA",5,82.8,9.92,-0.85,0.07,2.2,1.05,0,">1 nonsynonymous","E10T L60R F134S",3
"lib1","SARS-CoV-2","AATTTATAACCTAAAA",1,5.54,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R25P A192V S200P",3
"lib1","SARS-CoV-2","AATTTATACACTTCAT",1,57.34,10.73,-0.03,0.06,2.91,1.05,0,"1 nonsynonymous","R136Q",1
"lib1","SARS-CoV-2","AATTTATACTTTCTGA",7,92.67,9.84,-0.92,0.08,1.97,1.08,0,">1 nonsynonymous","V32I C49M",2
"lib1","SARS-CoV-2","AATTTATATCCCTTAG",1,9.53,8.44,-2.33,0.18,1.5,1,0.03,"1 nonsynonymous","D137M",1
"lib1","SARS-CoV-2","AATTTATCAAACGTTT",3,17.71,10.25,-0.52,0.13,2.5,1,0.01,">1 nonsynonymous","L95M K128P F134S",3
"lib1","SARS-CoV-2","AATTTATCATTACTTG",3,0.55,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AATTTATCGGCATATC",3,8.65,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K56S R73V G101F",3
"lib1","SARS-CoV-2","AATTTATGCTGCAGCC",7,24.49,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","Y50K F134G T170L",3
"lib1","SARS-CoV-2","AATTTATGGATGGTGA",4,47.14,10.8,0.04,0.05,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTATGGTTGCTGA",2,53.39,10.29,-0.48,0.09,2.79,1.05,0,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","AATTTATTAAATATCT",5,32.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A22D G86S R127F",3
"lib1","SARS-CoV-2","AATTTATTAATATTTG",6,86.33,6.25,-4.52,0.92,1.5,1.21,0.04,">1 nonsynonymous","P82T L95D C150T Y178S",4
"lib1","SARS-CoV-2","AATTTATTCTGATGGA",8,4.45,NA,NA,NA,NA,NA,NA,"stop","G9M D34Q T85R D97* I142H A190S",6
"lib1","SARS-CoV-2","AATTTATTGTGATGAT",1,15.12,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I28P D90Y N107D N130L",4
"lib1","SARS-CoV-2","AATTTATTTACGCACA",2,22.26,9.95,-0.81,0.1,2.22,1.03,0,">1 nonsynonymous","S36M F99L",2
"lib1","SARS-CoV-2","AATTTATTTTTGATCT",1,4.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","AATTTCAAAAAGACTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T G9L D59S V103M P133T G146R N157T G166P",8
"lib1","SARS-CoV-2","AATTTCAAAAGCAGCC",3,8.79,6.08,-4.68,2,1.5,1.13,0.01,">1 nonsynonymous","V71S N109H",2
"lib1","SARS-CoV-2","AATTTCAAAAGTCTGC",6,41.46,8.3,-2.46,0.23,1.66,1.17,0.02,">1 nonsynonymous","P96E E154P P169A",3
"lib1","SARS-CoV-2","AATTTCAACACTTCAG",4,28.05,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","K48W G146L C158A",3
"lib1","SARS-CoV-2","AATTTCAAGAGGCACA",13,3.52,NA,NA,NA,NA,NA,NA,"stop","K94* G117V K128I",3
"lib1","SARS-CoV-2","AATTTCAATATACAGA",8,37.7,7.35,-3.41,0.48,1.5,1.22,0.07,">1 nonsynonymous","V20W Y35S C49M G74P D112K F185R K199T",7
"lib1","SARS-CoV-2","AATTTCACAAATAAAC",4,78.06,9.99,-0.77,0.08,2.46,1.06,0,">1 nonsynonymous","Y91S F160R",2
"lib1","SARS-CoV-2","AATTTCACAAGTTTCT",1,9.31,6.07,-4.69,1.12,3,1.05,0,">1 nonsynonymous","K94E R127T P133V F167L",4
"lib1","SARS-CoV-2","AATTTCAGATTAGAAT",1,68.63,9.57,-1.19,0.12,1.64,1.11,0.01,"1 nonsynonymous","G86H",1
"lib1","SARS-CoV-2","AATTTCAGCCGTGATT",5,11.73,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","D34N A42D F70N",3
"lib1","SARS-CoV-2","AATTTCAGGCCATACA",5,96.86,9.18,-1.59,0.07,2.04,1.08,0,">1 nonsynonymous","T3L Y121T",2
"lib1","SARS-CoV-2","AATTTCATAGCTTCCT",4,12.88,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I88Q P96L E141Y",3
"lib1","SARS-CoV-2","AATTTCATTAATGTCC",3,47.88,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D112S Y119V",2
"lib1","SARS-CoV-2","AATTTCCAAAACTGGA",1,7.51,6,-4.76,0.27,3,1.02,0,">1 nonsynonymous","W23Q A81I R127M",3
"lib1","SARS-CoV-2","AATTTCCAACCATGCA",3,29.32,6,-4.76,1.28,2.91,1.23,0.01,">1 nonsynonymous","S43T K87S S113Y V173Y",4
"lib1","SARS-CoV-2","AATTTCCACAAATATG",7,59.91,10.54,-0.22,0.06,2.91,1.05,0,">1 nonsynonymous","I2W S41Y",2
"lib1","SARS-CoV-2","AATTTCCATCACTCAA",2,16.99,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","G51S D137V",2
"lib1","SARS-CoV-2","AATTTCCATCACTCGG",4,60.53,10.8,0.03,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTCCATCTAGAAT",3,53.07,8.91,-1.85,0.14,2.18,1.09,0.01,">1 nonsynonymous","Y35N V52S Y66T K87I Q163R",5
"lib1","SARS-CoV-2","AATTTCCCACAAACAA",1,3.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","AATTTCCCACACAGGG",4,40.18,10.58,-0.19,0.05,2.92,1.07,0,">1 nonsynonymous","S53H K87R T100I A190S",4
"lib1","SARS-CoV-2","AATTTCCCATACCATT",3,43.8,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","L38N A89R N118L E135P Y178S",5
"lib1","SARS-CoV-2","AATTTCCCTACCGCAA",10,164.78,10.69,-0.07,0.06,2.94,1.04,0,">1 nonsynonymous","N130L T148F T201H",3
"lib1","SARS-CoV-2","AATTTCCGTTTATTAT",3,23.52,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S36L V65L I88Y W106A",4
"lib1","SARS-CoV-2","AATTTCCTTCCCCCCA",1,7.96,6,-4.76,0.31,3,1,0,">1 nonsynonymous","K56G Y66W G86R V115K N130S",5
"lib1","SARS-CoV-2","AATTTCCTTGACGCAT",4,46.99,6.44,-4.33,0.42,1.5,1.12,0.02,">1 nonsynonymous","N4D A105R N151T",3
"lib1","SARS-CoV-2","AATTTCGAAATTTACA",2,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y Y123N V173L",3
"lib1","SARS-CoV-2","AATTTCGAGTATTATA",1,60.27,10.45,-0.32,0.08,2.75,1.08,0,">1 nonsynonymous","E10D G152L",2
"lib1","SARS-CoV-2","AATTTCGAGTTGCCCG",1,22.73,10.68,-0.08,0.07,2.94,1,0,">1 nonsynonymous","C61A D98S",2
"lib1","SARS-CoV-2","AATTTCGCCCCCCCGT",7,80.38,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K87R L95V C158Y",3
"lib1","SARS-CoV-2","AATTTCGCTTATTCTC",6,17.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13H V153M R179P",3
"lib1","SARS-CoV-2","AATTTCGTAGACAATC",1,1,NA,NA,NA,NA,NA,NA,"stop","T3I S53F N120* Q163N",4
"lib1","SARS-CoV-2","AATTTCTACAAACAAG",3,73.98,10.05,-0.72,0.06,2.67,1,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","AATTTCTACACAACAG",1,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101S S129T",2
"lib1","SARS-CoV-2","AATTTCTACACAATCA",2,7.24,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","V37Y D68L W106A",3
"lib1","SARS-CoV-2","AATTTCTAGATAATAT",9,0.14,NA,NA,NA,NA,NA,NA,"stop","P7* C61T G86L L95* N120F",5
"lib1","SARS-CoV-2","AATTTCTATTATAAAA",2,5.26,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","N92K R136C",2
"lib1","SARS-CoV-2","AATTTCTATTTAACTC",7,1.78,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib1","SARS-CoV-2","AATTTCTCAGAGATAC",5,106.98,10.68,-0.08,0.08,2.85,1.07,0,"1 nonsynonymous","S53Q",1
"lib1","SARS-CoV-2","AATTTCTCCCCCTTAG",1,10.67,8.1,-2.67,0.23,1.97,1.03,0.02,">1 nonsynonymous","F62N L131I A145P",3
"lib1","SARS-CoV-2","AATTTCTGCGGGTATT",2,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106M R127M S139C",3
"lib1","SARS-CoV-2","AATTTCTTTCCTCCAG",10,24.98,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y50S D98W I104Y",3
"lib1","SARS-CoV-2","AATTTGAAGAGAGTTA",3,6.69,9.94,-0.83,0.12,2.6,1.34,0.01,"1 nonsynonymous","R73Q",1
"lib1","SARS-CoV-2","AATTTGAAGCCTTAAA",3,45.73,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","AATTTGAAGCTTAAAT",4,0.24,NA,NA,NA,NA,NA,NA,"stop","F8M Y21K K48L A89H K132* C158S",6
"lib1","SARS-CoV-2","AATTTGACAAAACTTA",10,121.82,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F8L Y50D P54C",3
"lib1","SARS-CoV-2","AATTTGACATTACGTA",2,6.25,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","D68V G86I E141M",3
"lib1","SARS-CoV-2","AATTTGACGCGAATGA",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30S I104P N151S V180K",4
"lib1","SARS-CoV-2","AATTTGACGTAGAAAG",5,29.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K S43N C102V N120I G146N",5
"lib1","SARS-CoV-2","AATTTGATCGAATTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","K56I R179*",2
"lib1","SARS-CoV-2","AATTTGATTAGGTTAC",2,7.67,10.36,-0.4,0.11,2.67,1.05,0,">1 nonsynonymous","D34H A42Y",2
"lib1","SARS-CoV-2","AATTTGCAATATACAC",1,34.74,10.59,-0.17,0.08,2.96,1.04,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","AATTTGCAATTACTGG",5,2.93,NA,NA,NA,NA,NA,NA,"stop","I28L F62* S129R",3
"lib1","SARS-CoV-2","AATTTGCAGAGTGAAA",8,164.84,10.65,-0.11,0.05,2.91,1.03,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","AATTTGCCAGCAAATG",1,57.33,10.76,0,0.05,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTGCCTAAAACCA",3,125.92,9.14,-1.62,0.07,2.7,1.09,0,">1 nonsynonymous","I104L I142R",2
"lib1","SARS-CoV-2","AATTTGCCTAGGGACG",1,28.67,10.57,-0.2,0.06,2.91,1.06,0,">1 nonsynonymous","L122E K128V",2
"lib1","SARS-CoV-2","AATTTGCGATACAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","AATTTGCTAAACATGA",12,3.42,NA,NA,NA,NA,NA,NA,"stop","F44* Q163C",2
"lib1","SARS-CoV-2","AATTTGGACAATCGTG",1,15.79,8.31,-2.45,0.19,1.93,1.09,0.01,">1 nonsynonymous","N24R D34N N157C",3
"lib1","SARS-CoV-2","AATTTGGAGACACTAG",3,30.11,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","V103F A190V S200G",3
"lib1","SARS-CoV-2","AATTTGGGCCCTACAC",3,123.12,10.7,-0.06,0.05,2.9,1.04,0,">1 nonsynonymous","P149Q T201R",2
"lib1","SARS-CoV-2","AATTTGGTCGAATAAA",3,71.58,9.98,-0.79,0.06,2.87,1,0,">1 nonsynonymous","F44H F156K",2
"lib1","SARS-CoV-2","AATTTGTAAAGCTAAT",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S D90F K132R",3
"lib1","SARS-CoV-2","AATTTGTAAATAGATA",7,23.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D90K W106I A145W T201R",4
"lib1","SARS-CoV-2","AATTTGTATTATGGAC",1,5.5,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","L95K R124S",2
"lib1","SARS-CoV-2","AATTTGTCACGCCCAG",3,42.11,10.18,-0.58,0.12,2.68,1,0,">1 nonsynonymous","K26R V37R T63S N110R L183F A190C",6
"lib1","SARS-CoV-2","AATTTGTGAAAGATTC",5,38.12,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96L S113F R127Q",3
"lib1","SARS-CoV-2","AATTTGTGCAAACCTA",1,6.53,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6Y L95K F99S",3
"lib1","SARS-CoV-2","AATTTGTGCTTGATTA",11,97.88,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N24K S36E V71H",3
"lib1","SARS-CoV-2","AATTTGTGGGCGAGAG",7,43.08,8.16,-2.6,0.15,2.32,1.08,0.01,">1 nonsynonymous","A67L T85A D97Y G166F",4
"lib1","SARS-CoV-2","AATTTGTGTTCAAATT",1,9.66,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","S36E T46I R73W I88Y",4
"lib1","SARS-CoV-2","AATTTGTTATATTTAG",3,32.18,6.59,-4.17,0.63,1.5,1.23,0.06,">1 nonsynonymous","Y39Q Y93G G146W",3
"lib1","SARS-CoV-2","AATTTGTTGTTTTCCA",3,36.71,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F99S V115A",2
"lib1","SARS-CoV-2","AATTTGTTTTGAAAAA",12,98.67,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","V20T P82S I88D",3
"lib1","SARS-CoV-2","AATTTTAAACATTGAT",7,156.3,10.03,-0.73,0.04,2.8,1.03,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","AATTTTAAACTTAACG",2,8.1,6.69,-4.07,0.66,1.5,1.17,0.06,">1 nonsynonymous","L57T F62G W106L",3
"lib1","SARS-CoV-2","AATTTTAACTCAATAA",5,69.1,9.79,-0.97,0.16,1.89,1.08,0.01,">1 nonsynonymous","C61Y R136F",2
"lib1","SARS-CoV-2","AATTTTACGAAAAATA",8,63.83,9.93,-0.83,0.1,2.22,1.01,0,">1 nonsynonymous","S53G N64K T100S N151K",4
"lib1","SARS-CoV-2","AATTTTACTATACATC",1,33.04,10.64,-0.13,0.06,2.8,1.18,0,">1 nonsynonymous","T3M N4P A14S",3
"lib1","SARS-CoV-2","AATTTTACTCAGAGGA",1,4.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","AATTTTACTCATACAA",2,1.56,NA,NA,NA,NA,NA,NA,"stop","A18F G83M Y119S Y165* Y175F",5
"lib1","SARS-CoV-2","AATTTTAGCATTTGGT",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S K199L",2
"lib1","SARS-CoV-2","AATTTTAGCCAACGAC",6,43.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N13C P82Y D98N",3
"lib1","SARS-CoV-2","AATTTTATAATATTCA",1,60.35,10.21,-0.55,0.1,2.57,1.07,0,"1 nonsynonymous","P133K",1
"lib1","SARS-CoV-2","AATTTTATATGATTTG",8,149.45,10.66,-0.11,0.05,2.85,1.09,0,"1 nonsynonymous","A81E",1
"lib1","SARS-CoV-2","AATTTTATCATATGAG",3,61.43,10.27,-0.49,0.03,2.93,1,0,">1 nonsynonymous","K87P N120L",2
"lib1","SARS-CoV-2","AATTTTATCGATAACC",8,144.35,8.7,-2.06,0.16,1.53,1.18,0.01,">1 nonsynonymous","A33H S45V P133W",3
"lib1","SARS-CoV-2","AATTTTATGGCTAAAC",11,304.07,10.73,-0.03,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AATTTTATTTAAATGA",3,20.63,6.82,-3.94,0.46,1.5,1.08,0.05,">1 nonsynonymous","F12V G86L G101I P133V L162Y",5
"lib1","SARS-CoV-2","AATTTTATTTATTCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3E P96* K128A",3
"lib1","SARS-CoV-2","AATTTTCACACAGTAT",3,41.22,8.32,-2.44,0.19,1.5,1.02,0.02,">1 nonsynonymous","Y39K A105S I142Q V153K G166F T201I",6
"lib1","SARS-CoV-2","AATTTTCCAATAGAAA",6,54.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10G A18V V32T G117W G152L",5
"lib1","SARS-CoV-2","AATTTTCCATACCCTA",6,46.31,6.11,-4.65,0.8,1.5,1.21,0.02,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","AATTTTCTAGCAGTTA",5,1.89,NA,NA,NA,NA,NA,NA,"stop","G101N E141* F156I",3
"lib1","SARS-CoV-2","AATTTTCTAGGCCCAA",4,50.2,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A89Y S113E R136Y",3
"lib1","SARS-CoV-2","AATTTTCTGAATATGA",2,16.83,6.36,-4.4,0.88,1.5,1.24,0.06,">1 nonsynonymous","S19E D97Y S129C V173K G196L",5
"lib1","SARS-CoV-2","AATTTTGGACAAGCTT",1,36.58,8.63,-2.13,0.22,2.04,1.05,0.02,">1 nonsynonymous","L5S T46I F62W P96A A145L",5
"lib1","SARS-CoV-2","AATTTTGTGCAGCAGT",13,20.02,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","C49V L57F G83R E154G",4
"lib1","SARS-CoV-2","AATTTTTACAAATGAA",2,6.33,8.05,-2.71,0.33,1.94,1.15,0.03,"1 nonsynonymous","N157P",1
"lib1","SARS-CoV-2","AATTTTTACATGGTCA",3,21.69,9.89,-0.87,0.13,2.54,1.05,0.01,">1 nonsynonymous","Y39M P133R",2
"lib1","SARS-CoV-2","AATTTTTAGCCCCATC",1,15.75,7.83,-2.94,0.42,1.5,1.1,0.06,">1 nonsynonymous","N1V G86F Q163A",3
"lib1","SARS-CoV-2","AATTTTTCCAGCCTAC",2,1.42,NA,NA,NA,NA,NA,NA,"stop","V37R G174* K199H",3
"lib1","SARS-CoV-2","AATTTTTGATGTCAAG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","S43A E154M N171*",3
"lib1","SARS-CoV-2","AATTTTTGTACGGGAT",7,7.21,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","T3I Q84V V103G N110A T201M",5
"lib1","SARS-CoV-2","ACAAAAAAAAAAGAAC",3,9.5,6.9,-3.86,0.41,1.5,1.02,0.03,">1 nonsynonymous","F44N P82L E135S",3
"lib1","SARS-CoV-2","ACAAAAAAAAAGCTGG",1,7.47,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A67T I88Y Y93T P149I K198R",5
"lib1","SARS-CoV-2","ACAAAAAAAAGCAGTT",1,11.66,8.7,-2.06,0.11,3,1.02,0,"1 nonsynonymous","F126Q",1
"lib1","SARS-CoV-2","ACAAAAAAACATGTTA",2,20.79,10.49,-0.28,0.08,2.86,1.06,0,">1 nonsynonymous","R16V D59V",2
"lib1","SARS-CoV-2","ACAAAAAAACGAGAAC",4,32.25,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","D68L A89K Y165N",3
"lib1","SARS-CoV-2","ACAAAAAAAGTACGAT",10,124.61,10.7,-0.06,0.05,2.97,1.01,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","ACAAAAAAATACTGTA",2,28.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88R D112E C150F",3
"lib1","SARS-CoV-2","ACAAAAAAATCGCATA",3,13.01,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T15G K94V G116S",3
"lib1","SARS-CoV-2","ACAAAAAAATTGCCAT",9,78.32,7.65,-3.12,0.29,1.5,1.11,0.03,">1 nonsynonymous","A105V N120F G146H",3
"lib1","SARS-CoV-2","ACAAAAAACACCACTT",3,111.14,8.4,-2.36,0.15,2.58,1.06,0.01,">1 nonsynonymous","A42E P149F Y175S",3
"lib1","SARS-CoV-2","ACAAAAAACACTATAA",2,8.34,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G9S T15N F99D Y121K",4
"lib1","SARS-CoV-2","ACAAAAAACATCACCA",1,7.2,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K26S F44Y Y50S N64S G83N G101E C158S Y165F S184M",9
"lib1","SARS-CoV-2","ACAAAAAAGGATAGCC",2,10.73,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","A105H R136W",2
"lib1","SARS-CoV-2","ACAAAAAAGGATTACG",5,53.86,10.8,0.03,0.06,2.92,1.03,0,"1 nonsynonymous","K198Y",1
"lib1","SARS-CoV-2","ACAAAAAAGTTAACGT",6,8.26,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","S19G C49W S113M",3
"lib1","SARS-CoV-2","ACAAAAAATAAAACCG",3,7.4,6,-4.76,2,1.5,1.09,0.07,">1 nonsynonymous","G9N V103S N118Y",3
"lib1","SARS-CoV-2","ACAAAAAATATTTTTA",6,65.89,7.87,-2.89,0.18,1.5,1.12,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ACAAAAAATGTAAGCG",3,33.25,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C6M Y66H G86I L95D",4
"lib1","SARS-CoV-2","ACAAAAAATTAAAATA",3,1.16,NA,NA,NA,NA,NA,NA,"stop","Y35N S45P A105V Y123* R124S C158M",6
"lib1","SARS-CoV-2","ACAAAAAATTGTGAAT",4,55.33,8.83,-1.94,0.11,2.78,1.14,0,">1 nonsynonymous","G83W Y119S",2
"lib1","SARS-CoV-2","ACAAAAACAACAAAAA",1,1.71,NA,NA,NA,NA,NA,NA,"stop","V37* G155V Y165Q R179G A192T",5
"lib1","SARS-CoV-2","ACAAAAACAACACAGA",3,43.45,7.38,-3.38,0.16,1.71,1.06,0.01,">1 nonsynonymous","N64S C158H",2
"lib1","SARS-CoV-2","ACAAAAACAATCCTCC",3,36.39,6,-4.76,0.67,2.96,1.12,0,">1 nonsynonymous","Y35G L60S T100Q L131R",4
"lib1","SARS-CoV-2","ACAAAAACAATTATGA",1,40.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64S Y93T N120S S139D",4
"lib1","SARS-CoV-2","ACAAAAACAATTTATA",2,23.32,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N4Q F12I N64V Q84F L131H P149N",6
"lib1","SARS-CoV-2","ACAAAAACAGTATATT",4,11.94,7.99,-2.77,0.56,1.53,1.18,0.05,">1 nonsynonymous","L5H W23I K56V",3
"lib1","SARS-CoV-2","ACAAAAACATGAACAC",6,17.46,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y50T A81N K94E N157S",4
"lib1","SARS-CoV-2","ACAAAAACATTGTCGG",2,8.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D68E K87C G174V",3
"lib1","SARS-CoV-2","ACAAAAACCAACGCCA",7,113.45,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V52I T55W N64L N92F",4
"lib1","SARS-CoV-2","ACAAAAACCGGGACAT",1,35.23,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N40C T140I R179G",3
"lib1","SARS-CoV-2","ACAAAAACTCTATCCC",4,81.39,10.53,-0.23,0.05,2.89,1.07,0,">1 nonsynonymous","V37W V77M",2
"lib1","SARS-CoV-2","ACAAAAACTGGATCGG",1,6.77,7.2,-3.57,0.36,1.5,1.01,0.03,">1 nonsynonymous","P82M N92V T100V",3
"lib1","SARS-CoV-2","ACAAAAACTTCAACTC",6,119.5,10.1,-0.67,0.07,2.6,1.01,0,">1 nonsynonymous","F12V T63L",2
"lib1","SARS-CoV-2","ACAAAAACTTGTTTAC",4,136.08,10.64,-0.12,0.04,2.89,1.05,0,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","ACAAAAAGAGCAATAT",7,133.43,9.53,-1.23,0.11,1.76,1.13,0,">1 nonsynonymous","S29A S41Y S69L N130T T201N",5
"lib1","SARS-CoV-2","ACAAAAAGATTTTAAT",1,44.37,9.38,-1.39,0.08,2.93,1.08,0,">1 nonsynonymous","G9H L60R Y119S G152S P197L",5
"lib1","SARS-CoV-2","ACAAAAAGCTAAATTC",3,39.2,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S29Y L60W V77E N110M G146K",5
"lib1","SARS-CoV-2","ACAAAAAGCTTGCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5S G86* D112I Y159R",4
"lib1","SARS-CoV-2","ACAAAAAGGAGCGATG",1,7.9,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","K94N D112N C150E",3
"lib1","SARS-CoV-2","ACAAAAATACAAAACT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","L60* F126K Y175L",3
"lib1","SARS-CoV-2","ACAAAAATAGCCACAG",4,133.61,6.71,-4.05,0.3,1.5,1.17,0.01,"1 nonsynonymous","C150R",1
"lib1","SARS-CoV-2","ACAAAAATAGTTCTAT",3,73.59,10.76,-0.01,0.07,2.9,1.04,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","ACAAAAATATACAGCA",8,79.94,9.29,-1.47,0.11,2.81,1.11,0.01,">1 nonsynonymous","G146R Q168Y G174P",3
"lib1","SARS-CoV-2","ACAAAAATCCTAACCA",6,50.06,10.75,-0.02,0.34,1.5,1,0.03,">1 nonsynonymous","G51A P96S T148R",3
"lib1","SARS-CoV-2","ACAAAAATCTAGCTAT",15,98.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2R T3K A67V R73A Y91E E141M V173R",7
"lib1","SARS-CoV-2","ACAAAAATGATTTTTA",1,5.98,6.02,-4.74,2,1.5,1.15,0.06,">1 nonsynonymous","C61P Y91Q D97Q P133C P149S Y178I",6
"lib1","SARS-CoV-2","ACAAAAATGTGTCTCC",2,1.09,NA,NA,NA,NA,NA,NA,"stop","P54R F134* S147T",3
"lib1","SARS-CoV-2","ACAAAAATTCATTGTC",6,101.61,9.95,-0.81,0.04,2.77,1.05,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","ACAAAACAAAAGGTGG",2,11.77,8.58,-2.19,0.32,1.56,1.06,0.03,">1 nonsynonymous","S41Y V77L G86A Y175F",4
"lib1","SARS-CoV-2","ACAAAACAAACTCAGC",3,81.58,8.67,-2.1,0.2,1.68,1.15,0.01,">1 nonsynonymous","G86C S129A T201P",3
"lib1","SARS-CoV-2","ACAAAACAAATACACG",5,106.4,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I88M Q176S",2
"lib1","SARS-CoV-2","ACAAAACAACAATTTT",3,31.59,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I28R Y119L",2
"lib1","SARS-CoV-2","ACAAAACAACATCCCT",1,50.31,6,-4.76,2,3,1.23,0,">1 nonsynonymous","I2A D34V S45K T63M D68N Y91K",6
"lib1","SARS-CoV-2","ACAAAACAACCTTATA",4,65,10.69,-0.07,0.11,2.87,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAAAACACAGCACCG",1,31.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W F44D Y123L P149L T201M",5
"lib1","SARS-CoV-2","ACAAAACACAGTAACT",4,73.09,10.14,-0.63,0.08,2.68,1,0,">1 nonsynonymous","E141I L162V",2
"lib1","SARS-CoV-2","ACAAAACACCAGCTCG",5,57.2,6.71,-4.06,0.3,1.5,1.14,0.01,">1 nonsynonymous","S36T A42T W106E G155Q Q163L C195F",6
"lib1","SARS-CoV-2","ACAAAACACGACTTAT",8,44.21,6,-4.76,0.98,1.63,1.17,0.01,">1 nonsynonymous","A105E G146L",2
"lib1","SARS-CoV-2","ACAAAACAGCACCTAA",1,6.42,6,-4.76,2,1.5,1.14,0.08,">1 nonsynonymous","I88C L95K G166S",3
"lib1","SARS-CoV-2","ACAAAACAGGGTATTT",4,35.44,6.7,-4.06,0.44,1.5,1.09,0.03,">1 nonsynonymous","D68T D75R T170F",3
"lib1","SARS-CoV-2","ACAAAACATCAGATGT",3,114.49,10.12,-0.64,0.04,2.86,1.01,0,"1 nonsynonymous","Y121K",1
"lib1","SARS-CoV-2","ACAAAACCCCTCGTCC",3,26.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12H F44L G117R P161L L183K",5
"lib1","SARS-CoV-2","ACAAAACCGAATTCTA",2,12.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93Q S108R G117R P149G S184N",5
"lib1","SARS-CoV-2","ACAAAACCTAGAGACC",3,51.99,10.86,0.1,0.08,2.91,1.06,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","ACAAAACGACTAAACC",9,41.59,6.37,-4.4,0.5,1.5,1.14,0.02,">1 nonsynonymous","I88S N151I K198T",3
"lib1","SARS-CoV-2","ACAAAACGCAGGTCCC",2,13.15,10.3,-0.47,0.21,2.62,1.12,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAACGCATAAATG",6,109.37,10.66,-0.11,0.03,2.89,1.08,0,"1 nonsynonymous","E154G",1
"lib1","SARS-CoV-2","ACAAAACGCTGTCACA",6,0.62,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ACAAAACTATGTAATG",5,132.92,10.68,-0.08,0.03,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAAAACTCCGCATCG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","P7* V182C",2
"lib1","SARS-CoV-2","ACAAAACTCGATACAT",5,166.02,10.78,0.01,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAAAACTGGCCGTTA",6,43.75,7.69,-3.08,0.39,1.5,1.08,0.06,">1 nonsynonymous","R27V G51D W106R G117Y",4
"lib1","SARS-CoV-2","ACAAAACTGTCACGCA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","T55P L111P P161N K198*",4
"lib1","SARS-CoV-2","ACAAAACTTCCAGAGT",11,116.54,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y143R T148S G155I T201A",4
"lib1","SARS-CoV-2","ACAAAACTTCTTTAAT",2,44.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S108F G155W Q163C",3
"lib1","SARS-CoV-2","ACAAAAGAAGGGGGCC",2,11.39,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","I80M Q84S V182Q",3
"lib1","SARS-CoV-2","ACAAAAGAATGTTTAA",5,9.9,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K56F D68W V77S D112V E135T",5
"lib1","SARS-CoV-2","ACAAAAGACCTAAACG",4,84.15,10.8,0.04,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAAGACGCTAGCC",2,11.75,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","V11K A22V D90L",3
"lib1","SARS-CoV-2","ACAAAAGAGACATCTT",2,21.56,10.53,-0.23,0.1,2.89,1.07,0.01,"1 nonsynonymous","G152M",1
"lib1","SARS-CoV-2","ACAAAAGATCCAATGA",1,0.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102M",1
"lib1","SARS-CoV-2","ACAAAAGCAAAGTGAG",2,15.76,10.69,-0.08,0.13,2.82,1.16,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","ACAAAAGCCCATCACC",3,0.17,NA,NA,NA,NA,NA,NA,"stop","Y119* E135V G166E",3
"lib1","SARS-CoV-2","ACAAAAGCCCCTTACT",2,31.62,10.75,-0.02,0.08,2.9,1,0,"1 nonsynonymous","L38I",1
"lib1","SARS-CoV-2","ACAAAAGCCGTAGGTG",5,76.71,10.6,-0.17,0.06,2.86,1.06,0,">1 nonsynonymous","T55S A81S K132L",3
"lib1","SARS-CoV-2","ACAAAAGCCGTCCCTT",3,76.57,8.66,-2.1,0.08,2.86,1.05,0,">1 nonsynonymous","L60F F126V S147I G155S",4
"lib1","SARS-CoV-2","ACAAAAGGAGGAAAAA",1,21.8,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L5M K56L F167N T201V",4
"lib1","SARS-CoV-2","ACAAAAGGAGGTAGTA",2,1.44,NA,NA,NA,NA,NA,NA,"stop","R16S V37F F70W S129E Y143*",5
"lib1","SARS-CoV-2","ACAAAAGGCAATTTCC",10,109.03,9.74,-1.02,0.05,2.83,1.03,0,">1 nonsynonymous","Y91H A145V",2
"lib1","SARS-CoV-2","ACAAAAGGTAGGGGTA",2,60.23,10.78,0.02,0.06,2.91,1.07,0,"1 nonsynonymous","N110Q",1
"lib1","SARS-CoV-2","ACAAAAGGTTAAGTAA",4,93.28,10.71,-0.05,0.04,2.97,1.02,0,">1 nonsynonymous","V37F C61T A89V",3
"lib1","SARS-CoV-2","ACAAAAGTAACGTAAT",2,22.56,10.34,-0.42,0.13,2.56,1.02,0.01,">1 nonsynonymous","E135T E141L",2
"lib1","SARS-CoV-2","ACAAAAGTCCAAGGAG",2,17.25,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","W23N N58T N64S",3
"lib1","SARS-CoV-2","ACAAAAGTCCTAATGC",5,41.66,6,-4.76,2,1.5,1.27,0.01,">1 nonsynonymous","A14T G101A",2
"lib1","SARS-CoV-2","ACAAAAGTTAACTGCA",1,8.32,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y35R Y50Q L60C V71I K128N G146A P169L",7
"lib1","SARS-CoV-2","ACAAAATAAAAGCGTG",3,47.71,10.66,-0.11,0.05,2.89,1.01,0,">1 nonsynonymous","S41M D97I",2
"lib1","SARS-CoV-2","ACAAAATAAAATCTAA",1,8.4,9.43,-1.34,0.31,1.81,1.06,0.03,">1 nonsynonymous","G9W A42N D59S R127L T201V",5
"lib1","SARS-CoV-2","ACAAAATAAAGAAAGA",4,80.17,10.93,0.16,0.09,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAATAAATATGAA",4,12.08,9.13,-1.63,0.17,1.79,1.03,0.01,">1 nonsynonymous","T3L T15I A33S S129T G174W",5
"lib1","SARS-CoV-2","ACAAAATAAATCGATG",4,39.34,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R73V T100G W106L S164P Y178V",5
"lib1","SARS-CoV-2","ACAAAATAATGATCAG",4,33.75,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V103M Y165L",2
"lib1","SARS-CoV-2","ACAAAATACAAAGTTA",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54V A81K S147K V181K",4
"lib1","SARS-CoV-2","ACAAAATACACTTATA",1,34.57,10.01,-0.76,0.08,2.38,1.02,0,">1 nonsynonymous","P96Q S129A",2
"lib1","SARS-CoV-2","ACAAAATACATAAATC",2,14.23,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44R L57Y P96I S139E",4
"lib1","SARS-CoV-2","ACAAAATACCCTTACT",8,62.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12L W23T Q84F P96K Y119V G166F",6
"lib1","SARS-CoV-2","ACAAAATACCTGCTAA",7,8.24,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","D34I S41Q L95R",3
"lib1","SARS-CoV-2","ACAAAATACTGACACG",9,52.03,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y21R A42S I104M P149V",4
"lib1","SARS-CoV-2","ACAAAATAGGGACCAG",3,1.61,NA,NA,NA,NA,NA,NA,"stop","T63N N120*",2
"lib1","SARS-CoV-2","ACAAAATAGTTATGCA",5,82.39,8.11,-2.65,0.24,1.5,1.11,0.02,">1 nonsynonymous","D97T R127H I138P",3
"lib1","SARS-CoV-2","ACAAAATATAACTCAA",4,54.88,6.05,-4.72,1.3,1.5,1.19,0.04,">1 nonsynonymous","C6R V37C K56R P177K K199N",5
"lib1","SARS-CoV-2","ACAAAATATCTAGTAG",3,49.01,10.64,-0.12,0.11,2.78,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAATATGACGCTT",8,28.86,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","D97F F99L Q144I F156D",4
"lib1","SARS-CoV-2","ACAAAATCAGTAGCAG",2,20.39,7.44,-3.33,0.43,1.5,1.32,0.06,">1 nonsynonymous","F17W N30K Q84H G117R",4
"lib1","SARS-CoV-2","ACAAAATCATTCTAAC",1,21.97,6,-4.76,1.02,1.5,1.09,0.01,">1 nonsynonymous","D68K R124W G172V",3
"lib1","SARS-CoV-2","ACAAAATCCCGGCACT",1,13.7,8.43,-2.34,0.24,1.65,1.22,0.03,">1 nonsynonymous","N24Q F62Y Y91F Y165C",4
"lib1","SARS-CoV-2","ACAAAATCCGACATCA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","A42D G86V S113* N120G K128S P133F T140K N151I",8
"lib1","SARS-CoV-2","ACAAAATCTCAGGCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1A A14* A22T S41G L60R S129Y",6
"lib1","SARS-CoV-2","ACAAAATGAAAGTTAC",2,58.63,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F44V Y123L P177V",3
"lib1","SARS-CoV-2","ACAAAATGGAACAAAG",6,52.2,8.92,-1.85,0.16,2.14,1.12,0.01,">1 nonsynonymous","A14I N64V N120M V153M Q168N",5
"lib1","SARS-CoV-2","ACAAAATTATGCTAAT",6,100.52,6.12,-4.65,0.56,1.5,1.14,0.01,">1 nonsynonymous","P54S Q168P",2
"lib1","SARS-CoV-2","ACAAAATTGCCCGCAC",2,18.51,9.98,-0.78,0.14,2.07,1,0,">1 nonsynonymous","N4I Y121V",2
"lib1","SARS-CoV-2","ACAAAATTTCACTGGT",2,134.46,10.72,-0.04,0.05,2.92,1.05,0,">1 nonsynonymous","G196V T201A",2
"lib1","SARS-CoV-2","ACAAAATTTCTTAAGG",2,19.02,10.09,-0.68,0.19,2.48,1.02,0.02,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","ACAAACAAAAAAGACC",3,27.56,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G51P I88C K132V",3
"lib1","SARS-CoV-2","ACAAACAAAACAGAAT",2,21.01,10.75,-0.01,0.09,2.88,1.04,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","ACAAACAAACAGGGAT",2,28.5,9.75,-1.02,0.16,1.95,1.08,0.01,">1 nonsynonymous","C6S A18S S19P",3
"lib1","SARS-CoV-2","ACAAACAAACCTTTCG",6,75.96,7.7,-3.07,0.27,1.5,1.15,0.02,">1 nonsynonymous","V37H I88F",2
"lib1","SARS-CoV-2","ACAAACAAATCTAGGT",3,98.13,9.53,-1.24,0.05,2.82,1.09,0,">1 nonsynonymous","K56H Y119Q",2
"lib1","SARS-CoV-2","ACAAACAAATGGAGCC",3,60.27,10.53,-0.23,0.04,2.93,1.01,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","ACAAACAAATTCTACC",5,50.35,9.02,-1.75,0.05,2.82,1.07,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","ACAAACAACAATTTAC",5,0,NA,NA,NA,NA,NA,NA,"stop","A105* S113A",2
"lib1","SARS-CoV-2","ACAAACAACAGGCACT",1,15.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68V D75A F99L",3
"lib1","SARS-CoV-2","ACAAACAACCACCGGG",12,8.41,8.14,-2.62,0.25,1.71,1.43,0.04,">1 nonsynonymous","T15N I28R T100R S129G G152T N171R G174L L183P",8
"lib1","SARS-CoV-2","ACAAACAACGAGATTG",2,68.35,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2S R124M V153E",3
"lib1","SARS-CoV-2","ACAAACAACTACCGCT",11,108.5,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y21L A22T F62K A89H",4
"lib1","SARS-CoV-2","ACAAACAAGCGATCGT",1,15.8,10.63,-0.14,0.05,2.95,1,0,">1 nonsynonymous","C61D K128V",2
"lib1","SARS-CoV-2","ACAAACACAAAACTAA",18,374.51,10.32,-0.45,0.03,2.94,1.03,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","ACAAACACAAAATTGG",2,14.57,10.39,-0.37,0.04,2.95,1,0,">1 nonsynonymous","S36L P149C",2
"lib1","SARS-CoV-2","ACAAACACAGAATAGT",7,8.87,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","T3P K56W Q84G V103L C158I",5
"lib1","SARS-CoV-2","ACAAACACATACACGC",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L D112K S129A L187Y",4
"lib1","SARS-CoV-2","ACAAACACCAATCCCC",9,69.46,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I72K D90S I104Y",3
"lib1","SARS-CoV-2","ACAAACACCGGGAAAA",2,26.44,8.33,-2.44,0.13,2.95,1.12,0.01,">1 nonsynonymous","N24E V37K T55H S139N F156N T170F",6
"lib1","SARS-CoV-2","ACAAACACTAGACATG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","D59M D75A K94* Q168N",4
"lib1","SARS-CoV-2","ACAAACAGAACGAGAA",4,15.17,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L60Y T85C F99A N110I",4
"lib1","SARS-CoV-2","ACAAACAGATACGCAA",3,66.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107S K128M G155D Y165M",4
"lib1","SARS-CoV-2","ACAAACATAAGTAATG",6,44.67,10.72,-0.04,0.07,2.94,1,0,">1 nonsynonymous","L5G N40A",2
"lib1","SARS-CoV-2","ACAAACATCAATGACT",1,17.6,10.67,-0.09,0.12,2.89,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACAAACATGATTGATT",1,39.67,10.06,-0.7,0.06,2.75,1.02,0,">1 nonsynonymous","C6L L122F",2
"lib1","SARS-CoV-2","ACAAACATGGCAAACT",5,117.31,8.76,-2,0.13,1.62,1.18,0.01,">1 nonsynonymous","D34W Q84L I138M V173D",4
"lib1","SARS-CoV-2","ACAAACCAAACAACAA",5,116.82,8.77,-1.99,0.06,2.68,1.12,0,">1 nonsynonymous","T55S G74S G116D K198S",4
"lib1","SARS-CoV-2","ACAAACCAACTTCATA",10,3.59,NA,NA,NA,NA,NA,NA,"stop","G9E K26M G83* N120P Y159R T201P",6
"lib1","SARS-CoV-2","ACAAACCACGGGCCAT",4,37.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13V L95A",2
"lib1","SARS-CoV-2","ACAAACCATAAGCTCG",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G C102D",2
"lib1","SARS-CoV-2","ACAAACCATGGGGGCT",4,66.11,10.77,0,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAACCCAAAAACAA",5,22.01,7.18,-3.59,0.29,1.5,1.16,0.03,">1 nonsynonymous","G9P D68A",2
"lib1","SARS-CoV-2","ACAAACCCATTCTAAA",1,63.56,10.06,-0.7,0.06,2.35,1.02,0,">1 nonsynonymous","N1L K56R A81V",3
"lib1","SARS-CoV-2","ACAAACCCTAAGGGAA",6,19.21,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D34T G51R F99S N157T",4
"lib1","SARS-CoV-2","ACAAACCGACTAGCTT",4,72.24,6,-4.76,0.62,1.5,1.14,0,">1 nonsynonymous","N24S Y50P I104L L122C C150A",5
"lib1","SARS-CoV-2","ACAAACCGCAACAATG",1,0.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","ACAAACCGCTCAACTG",1,7.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y93I T140N",2
"lib1","SARS-CoV-2","ACAAACCTAGAAAATA",2,10.24,6.12,-4.64,1.14,1.5,1.14,0.06,">1 nonsynonymous","T3L K48D N58C V103G N109S R127S L162I",7
"lib1","SARS-CoV-2","ACAAACCTATATACGG",2,38.39,10.25,-0.51,0.1,2.71,1.02,0,"1 nonsynonymous","S139Y",1
"lib1","SARS-CoV-2","ACAAACCTCAACAAAG",4,50.61,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A18V S36D K56V D68L D112E P169Q",6
"lib1","SARS-CoV-2","ACAAACCTCATGCCGA",4,21.29,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5V P96S G116L S139V A192V",5
"lib1","SARS-CoV-2","ACAAACCTCTCACCTT",6,0.5,NA,NA,NA,NA,NA,NA,"stop","E10A A81D N92G T140Q Y175*",5
"lib1","SARS-CoV-2","ACAAACCTGAATGGAT",2,32.82,6.22,-4.54,1.07,1.5,1.18,0.04,">1 nonsynonymous","N4I F17E D112W L122Y",4
"lib1","SARS-CoV-2","ACAAACCTGACCCTAG",8,177.61,10.74,-0.03,0.06,2.89,1.07,0,">1 nonsynonymous","L60Y P149Q",2
"lib1","SARS-CoV-2","ACAAACCTGACTAGTA",1,29.94,9.24,-1.52,0.21,1.5,1.08,0.02,">1 nonsynonymous","K94E N130P",2
"lib1","SARS-CoV-2","ACAAACCTGCACATAG",6,95.16,10.44,-0.32,0.04,2.9,1.02,0,">1 nonsynonymous","N40T D59R T140R",3
"lib1","SARS-CoV-2","ACAAACCTGTAAGTTA",1,11.99,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R27L G86E Y121W",3
"lib1","SARS-CoV-2","ACAAACCTTCAATTGG",3,71.33,10.41,-0.36,0.05,2.87,1.04,0,">1 nonsynonymous","D98H F134N",2
"lib1","SARS-CoV-2","ACAAACGAATCCCATT",2,54,9.81,-0.96,0.08,1.99,1.05,0,">1 nonsynonymous","L5R V11Y L38Y S43Y T100Y",5
"lib1","SARS-CoV-2","ACAAACGAGATATAGC",1,37.01,10.86,0.1,0.08,2.89,1.05,0,">1 nonsynonymous","L122Q T148G",2
"lib1","SARS-CoV-2","ACAAACGATGCCCAAA",2,18.48,10.87,0.1,0.35,2.55,1.04,0.05,"1 nonsynonymous","N58R",1
"lib1","SARS-CoV-2","ACAAACGCAGTCCACT",2,5.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H I104N E141C",3
"lib1","SARS-CoV-2","ACAAACGCATATAATA",5,40.27,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3C P82S A105V",3
"lib1","SARS-CoV-2","ACAAACGGAAAACGAA",2,147.27,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y91K S164G T170I Q176L",4
"lib1","SARS-CoV-2","ACAAACGGATTGAATC",1,11.39,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K114E R124P",2
"lib1","SARS-CoV-2","ACAAACGGGCCGCCAA",4,33.61,10.54,-0.23,0.1,2.86,1.03,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","ACAAACGTACAAGTCC",5,78.14,10.73,-0.03,0.07,2.89,1.07,0,">1 nonsynonymous","L5I V153Q",2
"lib1","SARS-CoV-2","ACAAACTAAAAAATTG",3,43.13,8.76,-2,0.12,2.83,1.13,0.01,">1 nonsynonymous","I2A F126R",2
"lib1","SARS-CoV-2","ACAAACTAAAAACACC",4,25.32,10.12,-0.64,0.11,2.37,1,0.01,">1 nonsynonymous","A18E I104V K132F V153I",4
"lib1","SARS-CoV-2","ACAAACTAAAGATACA",3,4.55,NA,NA,NA,NA,NA,NA,"stop","A105S L122* S129L T148V N151S Y159*",6
"lib1","SARS-CoV-2","ACAAACTAACCCTATA",5,61.09,10.84,0.07,0.08,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAACTAATATATAA",2,14.78,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","T3W A22R K94R Y123I P149T T170S",6
"lib1","SARS-CoV-2","ACAAACTACTCACGTC",8,60.14,6.63,-4.13,0.54,1.5,1.18,0.04,">1 nonsynonymous","G86P A190I",2
"lib1","SARS-CoV-2","ACAAACTAGAGTAGAA",1,14.19,6.85,-3.92,0.86,1.5,1.12,0.06,">1 nonsynonymous","Y91K D98T V115G Q176Y",4
"lib1","SARS-CoV-2","ACAAACTAGTAAAAAA",8,77.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F12N V65P",2
"lib1","SARS-CoV-2","ACAAACTCAAAAATCC",6,33.72,8.68,-2.09,0.22,1.5,1.12,0.03,">1 nonsynonymous","T55L T85D A105I P191H",4
"lib1","SARS-CoV-2","ACAAACTCAACGGGAT",5,144.66,9.88,-0.89,0.08,2.18,1.05,0,">1 nonsynonymous","P96S Q144V",2
"lib1","SARS-CoV-2","ACAAACTCACAGAGTA",2,18.91,8.61,-2.16,0.26,1.58,1.18,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","ACAAACTCAGATTGAC",4,18.8,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2N R127T V180E",3
"lib1","SARS-CoV-2","ACAAACTCCACAGACA",3,101.88,10.06,-0.7,0.09,2.48,1.04,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","ACAAACTCCATATCTA",2,20.33,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","N4R F70K",2
"lib1","SARS-CoV-2","ACAAACTCCCATTCGA",9,83.71,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38T F99K",2
"lib1","SARS-CoV-2","ACAAACTCGAATGGGC",6,61.24,8.42,-2.35,0.21,1.95,1.08,0.02,">1 nonsynonymous","D98G Y175M S184C",3
"lib1","SARS-CoV-2","ACAAACTGCTGCGACA",8,1.65,NA,NA,NA,NA,NA,NA,"stop","V11G Q84R Y93V G117A Y178*",5
"lib1","SARS-CoV-2","ACAAACTTTAAAAAAC",3,40.36,9.17,-1.6,0.15,1.8,1.09,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","ACAAAGAAAAATGACA",4,7.58,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","F62S V103N Y121A",3
"lib1","SARS-CoV-2","ACAAAGAAAAGACGCT",5,40.49,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I88Y Y119K",2
"lib1","SARS-CoV-2","ACAAAGAAAATATCAA",1,41.18,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C31Y L57S P133E",3
"lib1","SARS-CoV-2","ACAAAGAAATACGGAT",1,28.26,10.5,-0.26,0.11,2.8,1.1,0.01,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","ACAAAGAAATCGAGTG",4,34.88,6,-4.76,1.33,1.5,1.19,0.03,">1 nonsynonymous","N4V G86V N92L",3
"lib1","SARS-CoV-2","ACAAAGAACGCATGAG",9,82.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41R Q84S A105T R124H",4
"lib1","SARS-CoV-2","ACAAAGAAGGCCCTAT",3,126.7,10.5,-0.27,0.04,2.84,1.03,0,"1 nonsynonymous","T15G",1
"lib1","SARS-CoV-2","ACAAAGAAGTCAATGA",3,12.43,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I88Q Y119S",2
"lib1","SARS-CoV-2","ACAAAGAATTTTACGA",2,21.68,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W106V G155Y N171H",3
"lib1","SARS-CoV-2","ACAAAGACAACAATCC",2,25.94,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V20T G51K K56D D98L",4
"lib1","SARS-CoV-2","ACAAAGACAACGCCCA",5,2.16,NA,NA,NA,NA,NA,NA,"stop","T55S V65W I88* P133T T140V V182L",6
"lib1","SARS-CoV-2","ACAAAGACACCTACTA",1,21.7,10.72,-0.04,0.1,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAGACAGATAGTC",9,66.04,10.09,-0.67,0.06,2.83,1.07,0,"1 nonsynonymous","K114G",1
"lib1","SARS-CoV-2","ACAAAGACCCCTGATA",1,33.65,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A18V L38Q G83I",3
"lib1","SARS-CoV-2","ACAAAGACCTGCAACT",11,336.36,10.49,-0.27,0.02,2.92,1.02,0,">1 nonsynonymous","F44I Q84S T201N",3
"lib1","SARS-CoV-2","ACAAAGACGGGAGAAG",4,61.41,9.1,-1.66,0.11,2.5,1.12,0,">1 nonsynonymous","A18E D97V N118S T201E",4
"lib1","SARS-CoV-2","ACAAAGAGAAATTCAA",3,57.48,10.25,-0.51,0.04,2.91,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","ACAAAGAGTTTTCGCC",3,235.36,10.26,-0.51,0.03,2.93,1,0,">1 nonsynonymous","R27E T100F Q168N",3
"lib1","SARS-CoV-2","ACAAAGATAATTGAGC",5,96.68,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S19L T55F Q176C",3
"lib1","SARS-CoV-2","ACAAAGATACATTGAA",1,7.61,10.66,-0.11,0.18,2.72,1.07,0.02,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","ACAAAGATGCGAAAAC",4,51.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8L G86Y N92V N151L L162E T193P",6
"lib1","SARS-CoV-2","ACAAAGATTACGGGAT",2,94.36,10.72,-0.04,0.07,2.89,1.07,0,"1 nonsynonymous","K198M",1
"lib1","SARS-CoV-2","ACAAAGATTTACTGGG",6,57.54,6,-4.76,1.54,1.5,1.12,0,">1 nonsynonymous","C61F F62D N118L Y178N K199M",5
"lib1","SARS-CoV-2","ACAAAGCAAGGGATCG",3,37.16,10.64,-0.13,0.07,2.91,1.02,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","ACAAAGCACAAGATCT",2,0.28,NA,NA,NA,NA,NA,NA,"stop","Y50F N92F G101* G174N T201S",5
"lib1","SARS-CoV-2","ACAAAGCACTTTTAGT",2,34.61,6,-4.76,2,3,1.09,0,">1 nonsynonymous","G86C N109H N120M N151G",4
"lib1","SARS-CoV-2","ACAAAGCAGAATCCAT",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S I138L",2
"lib1","SARS-CoV-2","ACAAAGCATTAACTAT",3,22.06,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12L Q176G",2
"lib1","SARS-CoV-2","ACAAAGCCAACCTCAA",11,1.49,NA,NA,NA,NA,NA,NA,"stop","V37* S45L A105C Q168L",4
"lib1","SARS-CoV-2","ACAAAGCGGAATGCGT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","R27* I88A L111T",3
"lib1","SARS-CoV-2","ACAAAGCGTATAATCT",2,29.22,10.72,-0.05,0.03,2.91,1.04,0,"1 nonsynonymous","G51K",1
"lib1","SARS-CoV-2","ACAAAGCTAATTATTT",2,21.56,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S139I G152M F167S",3
"lib1","SARS-CoV-2","ACAAAGCTACTATATG",2,30.99,10.58,-0.18,0.06,2.89,1.01,0,">1 nonsynonymous","K26V T46W S53L",3
"lib1","SARS-CoV-2","ACAAAGCTAGAGAAGA",7,0.16,NA,NA,NA,NA,NA,NA,"stop","L5N K56* G83S F99C C150*",5
"lib1","SARS-CoV-2","ACAAAGCTATAAAAAT",11,159.5,10.15,-0.62,0.07,2.64,1.06,0,">1 nonsynonymous","V52Y A81R",2
"lib1","SARS-CoV-2","ACAAAGCTATGTCGAA",4,11.28,10.85,0.09,0.34,2.62,1.02,0.03,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","ACAAAGGAAATATCAG",1,9.78,10.66,-0.11,0.17,3,1,0.01,">1 nonsynonymous","T55W F62L K128S",3
"lib1","SARS-CoV-2","ACAAAGGAACTTAAGA",6,52.35,10.58,-0.18,0.06,2.94,1.03,0,">1 nonsynonymous","T55R T140I",2
"lib1","SARS-CoV-2","ACAAAGGAATTCATAA",6,12.2,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A14K A105Y Q168S Y178E A190V",5
"lib1","SARS-CoV-2","ACAAAGGACTATGGAT",4,6.45,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N92F W106F",2
"lib1","SARS-CoV-2","ACAAAGGATAAGAGCT",2,32.9,10.68,-0.09,0.14,2.78,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACAAAGGATAAGCCGT",4,34.52,9.93,-0.84,0.08,2.41,1.02,0,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","ACAAAGGCAGTAAGGA",3,13.33,9.85,-0.91,0.19,1.87,1,0.02,">1 nonsynonymous","G9F C61H A105I T193I",4
"lib1","SARS-CoV-2","ACAAAGGGGGCGGGAA",5,34.93,10.32,-0.44,0.07,2.87,1.05,0,">1 nonsynonymous","Y39S S108T E141G",3
"lib1","SARS-CoV-2","ACAAAGGGTACGCGCT",6,3049.42,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","I2F E10G L38C T46A N92V V173R",6
"lib1","SARS-CoV-2","ACAAAGGGTCAATACA",4,33.41,6,-4.76,1.15,1.5,1.18,0.01,">1 nonsynonymous","P7F S19K L60R",3
"lib1","SARS-CoV-2","ACAAAGGGTGATATGG",2,60.26,10.72,-0.05,0.08,2.9,1.07,0,"1 nonsynonymous","T85K",1
"lib1","SARS-CoV-2","ACAAAGGTAACAAACG",7,0.65,NA,NA,NA,NA,NA,NA,"stop","K87* A105D",2
"lib1","SARS-CoV-2","ACAAAGGTAACTTTTA",5,1.01,NA,NA,NA,NA,NA,NA,"stop","F12S F44* G83L",3
"lib1","SARS-CoV-2","ACAAAGGTACGAATTT",2,12.69,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L60K Y93L",2
"lib1","SARS-CoV-2","ACAAAGGTACGAGAAG",7,42.24,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L38T Y121T G166R",3
"lib1","SARS-CoV-2","ACAAAGGTTCACCATG",7,127.9,7.03,-3.73,0.19,1.5,1.12,0.01,">1 nonsynonymous","Y39K A105S I142Q V153K G166F T201I",6
"lib1","SARS-CoV-2","ACAAAGGTTCTAATAT",3,5.78,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T15Y C61L D68K Q176L",4
"lib1","SARS-CoV-2","ACAAAGTAAACCAGAG",3,37,10.22,-0.54,0.18,2.32,1.03,0.01,">1 nonsynonymous","F8T R16S",2
"lib1","SARS-CoV-2","ACAAAGTAACCGGTTG",9,4.16,NA,NA,NA,NA,NA,NA,"stop","T15* Y35F F44N T100K G116P P161F V173F",7
"lib1","SARS-CoV-2","ACAAAGTACAAAAAAC",3,10.93,6,-4.76,1.7,3,1.03,0,">1 nonsynonymous","N4D C31Y D90G K114Q G155S G174R",6
"lib1","SARS-CoV-2","ACAAAGTACCCACCCA",1,45.06,10.78,0.02,0.04,2.93,1.01,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","ACAAAGTAGACAATTA",3,7.54,7.36,-3.41,0.31,1.51,1.22,0.04,">1 nonsynonymous","F8M I28A F62L D90H",4
"lib1","SARS-CoV-2","ACAAAGTCATACCGGT",1,7.95,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44P Y50P K114R",3
"lib1","SARS-CoV-2","ACAAAGTCCATAAACC",1,10.46,8.79,-1.97,0.12,2.78,1.06,0.01,">1 nonsynonymous","R73K T170V",2
"lib1","SARS-CoV-2","ACAAAGTCCCATTATT",4,80.27,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14L Y39L D68L",3
"lib1","SARS-CoV-2","ACAAAGTGCCAAAACT",2,59.05,9.18,-1.58,0.34,1.5,1,0.06,">1 nonsynonymous","K94S L122S Q176S",3
"lib1","SARS-CoV-2","ACAAAGTGCTAGAACT",2,32.63,6,-4.76,1.57,1.5,1.14,0.01,">1 nonsynonymous","I2K G117L R124S G146L V180F",5
"lib1","SARS-CoV-2","ACAAAGTGTGTAAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39Q T100H Y165W",3
"lib1","SARS-CoV-2","ACAAAGTGTTTTCAAA",1,45.88,9.1,-1.66,0.1,2.82,1.09,0,">1 nonsynonymous","S43K T55R G117S S164L",4
"lib1","SARS-CoV-2","ACAAAGTTAATGCAGT",7,88.87,9.11,-1.66,0.28,1.5,1,0.03,">1 nonsynonymous","K132Y L162R",2
"lib1","SARS-CoV-2","ACAAAGTTGAAGATAC",3,13.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V P96R G166L",3
"lib1","SARS-CoV-2","ACAAAGTTGACTAATA",1,10.15,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6A L57S N107V",3
"lib1","SARS-CoV-2","ACAAATAAACATCGAC",5,54.53,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","T3Y V37A N64L Y165R A190Y",5
"lib1","SARS-CoV-2","ACAAATAAAGAGGTTA",6,92.9,10.27,-0.49,0.05,2.78,1.04,0,">1 nonsynonymous","A33Y E141S Q168S T201L",4
"lib1","SARS-CoV-2","ACAAATAAAGGAGTCT",1,16.17,6,-4.76,1.99,1.5,1.21,0.03,">1 nonsynonymous","S147P C150L V173S",3
"lib1","SARS-CoV-2","ACAAATAACACCGAGG",2,9.1,6.51,-4.25,0.37,1.89,1.24,0.01,">1 nonsynonymous","N13W R27S R73P N171S",4
"lib1","SARS-CoV-2","ACAAATAACATATTGT",5,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125S F134M F160L",3
"lib1","SARS-CoV-2","ACAAATAACATCATCT",7,59.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6I D68V",2
"lib1","SARS-CoV-2","ACAAATAACGAACGTA",3,28.68,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","C6V Y50S F126S S147V",4
"lib1","SARS-CoV-2","ACAAATAACGTCACCT",2,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F D59L Y66L P96Y N107C V173T",6
"lib1","SARS-CoV-2","ACAAATAACTCCATCG",7,3.51,NA,NA,NA,NA,NA,NA,"stop","I2L G9P F99* R127S",4
"lib1","SARS-CoV-2","ACAAATAACTCGCCAT",4,44.82,9.74,-1.02,0.11,1.82,1.05,0,">1 nonsynonymous","A42V F99I",2
"lib1","SARS-CoV-2","ACAAATAAGCTCTTAA",1,66.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S108E F160V Q176G",3
"lib1","SARS-CoV-2","ACAAATAAGGGCCATA",12,24.25,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","I28V L95F V103D",3
"lib1","SARS-CoV-2","ACAAATAATAAGGAAG",17,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","ACAAATAATGGATTTA",5,33.81,9.81,-0.95,0.07,2.9,1.01,0,">1 nonsynonymous","V32T N118F A190E",3
"lib1","SARS-CoV-2","ACAAATACAAGTTACT",1,15.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10D S41V A67T",3
"lib1","SARS-CoV-2","ACAAATACACATACTT",3,15.8,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","R16G D59T F99V G117Y",4
"lib1","SARS-CoV-2","ACAAATACCTGAAAAT",12,126.69,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L38K T100H R124V",3
"lib1","SARS-CoV-2","ACAAATACTATCCCTG",8,2.86,NA,NA,NA,NA,NA,NA,"stop","V37R N109S F167*",3
"lib1","SARS-CoV-2","ACAAATACTCCGAGAG",2,14.95,9.48,-1.29,0.2,1.76,1.09,0.02,">1 nonsynonymous","I28L L131Q",2
"lib1","SARS-CoV-2","ACAAATATACACACCT",8,188.03,9.21,-1.56,0.3,1.5,1,0.04,">1 nonsynonymous","C6D A33M F44S S69L",4
"lib1","SARS-CoV-2","ACAAATATAGTTGAAA",5,141.3,10.75,-0.02,0.04,2.98,1.02,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","ACAAATATCACTATAA",2,38.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3G N92L Y121H L131A",4
"lib1","SARS-CoV-2","ACAAATATTACCCAAC",2,22.94,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N1T Y35T G86E Y123N T148F",5
"lib1","SARS-CoV-2","ACAAATCAACAGGTTA",8,83.24,8.18,-2.58,0.25,1.5,1.15,0.03,">1 nonsynonymous","A18K V71M I80L Q84M",4
"lib1","SARS-CoV-2","ACAAATCAATAGAGGT",10,124.84,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","F12S V37K N107Q Y165N",4
"lib1","SARS-CoV-2","ACAAATCAATTTTTGC",2,34.05,10.69,-0.08,0.1,2.9,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAATCACACACAGG",5,152.13,10.4,-0.36,0.04,2.89,1.02,0,">1 nonsynonymous","A42S N151Y",2
"lib1","SARS-CoV-2","ACAAATCATAAGCATG",6,51.85,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","N92R",1
"lib1","SARS-CoV-2","ACAAATCATCAAATTC",4,71.79,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","R27H S139V P177H",3
"lib1","SARS-CoV-2","ACAAATCCCCCTAACC",8,183.28,10.21,-0.56,0.06,2.71,1.01,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","ACAAATCCTGGAAATC",6,107.65,10.8,0.04,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAATCCTTGCGGTG",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q T201S",2
"lib1","SARS-CoV-2","ACAAATCGACAGACAT",6,81.3,9.96,-0.8,0.09,2.27,1.03,0,">1 nonsynonymous","G9R Y39F R127H",3
"lib1","SARS-CoV-2","ACAAATCGGCCGAAAC",4,98.93,10.11,-0.66,0.04,2.89,1,0,">1 nonsynonymous","G9C S19P A33C Y39R T201N",5
"lib1","SARS-CoV-2","ACAAATCTACTCCACT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A N40T P96S N107F D137F",5
"lib1","SARS-CoV-2","ACAAATCTATTTGATG",4,24.6,10.61,-0.15,0.08,2.85,1.13,0,">1 nonsynonymous","N4Y I138V",2
"lib1","SARS-CoV-2","ACAAATCTTATCGTAG",6,43.67,6.16,-4.61,1.14,1.5,1.21,0.04,">1 nonsynonymous","F8R Y93V I104V G146Y C158S",5
"lib1","SARS-CoV-2","ACAAATCTTTCGATTT",2,15.5,10.38,-0.38,0.08,2.92,1,0,">1 nonsynonymous","Y123W P149K",2
"lib1","SARS-CoV-2","ACAAATGAAATCAGCT",1,13.59,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A14F G86I S113F",3
"lib1","SARS-CoV-2","ACAAATGAACATTTAA",8,134.17,6.36,-4.4,0.43,1.5,1.16,0.01,">1 nonsynonymous","V20A Y39G K48M G146T",4
"lib1","SARS-CoV-2","ACAAATGAACTATAGC",5,52.95,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","P54S I72R K94P K128R T140Y C150V",6
"lib1","SARS-CoV-2","ACAAATGAAGAAGCAT",6,107.3,10.72,-0.04,0.05,2.95,1,0,">1 nonsynonymous","V32L T63G",2
"lib1","SARS-CoV-2","ACAAATGAGCTCTCAA",12,68.58,6.12,-4.65,0.8,1.5,1.24,0.02,">1 nonsynonymous","Y39M G86K N120R G146K",4
"lib1","SARS-CoV-2","ACAAATGATAAACTAA",2,12.22,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","T46I N64Y G86D Y119L Q144P V180G",6
"lib1","SARS-CoV-2","ACAAATGATCCATTTC",12,1.81,NA,NA,NA,NA,NA,NA,"stop","W23* D34Y S41N Y119R F167D",5
"lib1","SARS-CoV-2","ACAAATGATGAACAAT",3,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32M T55I D59C G152Q",4
"lib1","SARS-CoV-2","ACAAATGATGCAATAA",7,222.51,9.1,-1.66,0.12,1.84,1.14,0.01,">1 nonsynonymous","R127S P149K V173G",3
"lib1","SARS-CoV-2","ACAAATGATGGAACAA",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T L57G D97E R127P G155L",5
"lib1","SARS-CoV-2","ACAAATGCCTTGCACC",9,77.27,9.86,-0.9,0.13,2.08,1.05,0.01,">1 nonsynonymous","G9R A33P V65Y",3
"lib1","SARS-CoV-2","ACAAATGCTAAGCAAT",7,77.79,10.7,-0.07,0.04,2.92,1.05,0,">1 nonsynonymous","G83S T201L",2
"lib1","SARS-CoV-2","ACAAATGCTGGTTAAC",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99A T201Y",2
"lib1","SARS-CoV-2","ACAAATGGCCGTACAT",4,25.13,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","V52A W106L E186A",3
"lib1","SARS-CoV-2","ACAAATGGGATATAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I28* N64F L95P K128Q Q168E",5
"lib1","SARS-CoV-2","ACAAATGGGCAAACCG",4,18.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39R C61E G86F",3
"lib1","SARS-CoV-2","ACAAATGTACCAGACC",4,21.73,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","ACAAATGTATTAATAA",2,6,10.61,-0.16,0.17,2.93,1,0.01,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","ACAAATGTCAGCTTAG",9,131.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61V N107A V115Q Y175M",4
"lib1","SARS-CoV-2","ACAAATGTCATCCAAA",3,43.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95Q N107F R124G",3
"lib1","SARS-CoV-2","ACAAATGTCTACCTTT",6,45.62,6,-4.76,2,3,1.27,0,">1 nonsynonymous","L57R P96T F167L P177F",4
"lib1","SARS-CoV-2","ACAAATGTCTCTGGAG",2,40.12,10.82,0.06,0.07,2.96,1,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","ACAAATGTGAAACAAA",3,5.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T K56W E76S K87I Y91C C102T P177W S184L",8
"lib1","SARS-CoV-2","ACAAATGTGTTACAAA",2,24.67,9.91,-0.85,0.1,2.26,1.05,0,">1 nonsynonymous","N1D G9M Y91I",3
"lib1","SARS-CoV-2","ACAAATGTGTTGAGCT",3,23.13,10.78,0.01,0.07,2.97,1.02,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","ACAAATTAAGTGTTCG",1,6.14,6.13,-4.63,2,1.5,1.19,0.05,">1 nonsynonymous","V20M V37Q C61V P161S",4
"lib1","SARS-CoV-2","ACAAATTAATCCTAGA",1,30.48,6.29,-4.47,0.99,1.5,1.31,0.06,">1 nonsynonymous","F12E A18L K94W F99T W106S F126H",6
"lib1","SARS-CoV-2","ACAAATTAATGTACAC",2,73.82,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","A33T F62L Y91F Y123T Q176F",5
"lib1","SARS-CoV-2","ACAAATTACAAACTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40R I88G Q176*",3
"lib1","SARS-CoV-2","ACAAATTACGTCACCG",2,43.78,10.07,-0.69,0.08,2.78,1,0,">1 nonsynonymous","C31R T201F",2
"lib1","SARS-CoV-2","ACAAATTAGTATACAT",2,19.82,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","C6K A81K N120E G146R",4
"lib1","SARS-CoV-2","ACAAATTATACTGCTG",7,126.24,10.08,-0.68,0.06,2.33,1.05,0,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","ACAAATTATGAAACAG",4,16.27,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S147T N171I R179L V182C",4
"lib1","SARS-CoV-2","ACAAATTCACAACTAA",1,12.39,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y35G A89Y I104R L122S G174I",5
"lib1","SARS-CoV-2","ACAAATTCAGATTACC",5,811.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2K F12I A42E T63V Y91S L122V P133Q S139E P149R",9
"lib1","SARS-CoV-2","ACAAATTCCAATAGGC",2,156.64,10.24,-0.52,0.06,2.77,1.09,0,"1 nonsynonymous","Y178L",1
"lib1","SARS-CoV-2","ACAAATTCGCAGGCAT",5,55.18,9.37,-1.39,0.15,1.62,1.14,0.01,">1 nonsynonymous","N1Y V11P",2
"lib1","SARS-CoV-2","ACAAATTCTGAGCACC",1,3.01,NA,NA,NA,NA,NA,NA,"stop","I2T Y50D D90F G146*",4
"lib1","SARS-CoV-2","ACAAATTGATCTGAAC",1,26.55,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5P D68L Q84C I138R A190S",5
"lib1","SARS-CoV-2","ACAAATTGATGTAATT",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R G86V D112S Y121S V173P",5
"lib1","SARS-CoV-2","ACAAATTGGGCATTTC",1,88.31,10.75,-0.02,0.05,2.95,1.01,0,"1 nonsynonymous","V115A",1
"lib1","SARS-CoV-2","ACAAATTTACATGCAG",20,150.76,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37Q R73V K87M D97N Y143P",5
"lib1","SARS-CoV-2","ACAAATTTAGAGTAGA",1,12.4,10.03,-0.73,0.06,2.97,1,0,">1 nonsynonymous","R27W T170A",2
"lib1","SARS-CoV-2","ACAAATTTAGTCCTAA",2,26.33,6,-4.76,1.65,1.5,1.21,0.02,">1 nonsynonymous","Y35M V77F N118V A190E",4
"lib1","SARS-CoV-2","ACAAATTTCAACATGG",6,6.01,7.74,-3.03,0.54,1.5,1.27,0.08,">1 nonsynonymous","T3W T85W D97N V103F L122Q F185N",6
"lib1","SARS-CoV-2","ACAAATTTTTCTATTA",3,41.55,10.8,0.04,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACAAAAAAAAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","L131D I142*",2
"lib1","SARS-CoV-2","ACAACAAAAAAGCCCG",5,9.21,8.55,-2.22,0.16,2.08,1.05,0.01,">1 nonsynonymous","P96A Y143V L188P",3
"lib1","SARS-CoV-2","ACAACAAAAAAGCGTT",4,36.18,9.71,-1.06,0.04,2.92,1.03,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","ACAACAAAATTATATC",11,241.18,9.85,-0.91,0.08,1.94,1.05,0,">1 nonsynonymous","T15S N64K A105I",3
"lib1","SARS-CoV-2","ACAACAAACCTCGTAG",1,13.1,6.05,-4.71,0.87,3,1.17,0.03,">1 nonsynonymous","F8D A42F Y93A G146F",4
"lib1","SARS-CoV-2","ACAACAAACGAAAGGT",7,70.95,10.1,-0.67,0.06,2.78,1.04,0,">1 nonsynonymous","T3I G9P V37G A192L",4
"lib1","SARS-CoV-2","ACAACAAATAAGTTTT",2,7.2,6.58,-4.19,1.78,1.5,1.28,0.07,">1 nonsynonymous","S41Y S129Y F134L Y143C",4
"lib1","SARS-CoV-2","ACAACAAATAGACATT",1,16.47,9.98,-0.78,0.12,2.07,1.08,0.01,">1 nonsynonymous","N1M N58L T85M",3
"lib1","SARS-CoV-2","ACAACAAATATAGGCC",1,24.78,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","T63C K94V S129R L162T",4
"lib1","SARS-CoV-2","ACAACAAATTAGTATT",5,34.19,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N4M L38Q G86V R127E G152I",5
"lib1","SARS-CoV-2","ACAACAAATTTAAACT",6,94.52,10.58,-0.19,0.04,2.97,1.01,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","ACAACAACACAACACA",1,10.04,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F17G S69R L125T",3
"lib1","SARS-CoV-2","ACAACAACACTAAATA",2,92.11,10.38,-0.39,0.02,2.91,1.05,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","ACAACAACATCCATTT",5,60.25,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V103L G146L F167G",3
"lib1","SARS-CoV-2","ACAACAACGAGAGCTA",1,8.93,9.89,-0.87,0.31,1.6,1.16,0.04,">1 nonsynonymous","A42Q F44R P82V",3
"lib1","SARS-CoV-2","ACAACAACGTTTGGAT",3,29.3,10.78,0.02,0.09,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACAACTATATAGT",5,127.8,10.06,-0.71,0.07,2.63,1.02,0,">1 nonsynonymous","A33W F185H",2
"lib1","SARS-CoV-2","ACAACAACTGCATAAA",3,30.35,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2W F17L G101S N107H L188H",5
"lib1","SARS-CoV-2","ACAACAACTTTACTCT",3,67.98,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K87S C158M",2
"lib1","SARS-CoV-2","ACAACAAGCACTGTAA",3,34.21,10.23,-0.53,0.11,2.46,1,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","ACAACAAGCGACAAAA",1,25.42,10.38,-0.38,0.15,2.56,1.1,0.01,">1 nonsynonymous","T63P T148R",2
"lib1","SARS-CoV-2","ACAACAAGCGAGGTTT",16,224.72,9.79,-0.97,0.06,2.52,1.05,0,">1 nonsynonymous","N40G N107K",2
"lib1","SARS-CoV-2","ACAACAAGTTAATAAT",2,18.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L60S P96R C158I",3
"lib1","SARS-CoV-2","ACAACAAGTTTAAAGT",1,38.22,10.7,-0.07,0.07,2.92,1.05,0,">1 nonsynonymous","T148L Q168A",2
"lib1","SARS-CoV-2","ACAACAATACCGTACT",10,219.78,10.76,0,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACAATGTCCGAAC",3,53.4,10.76,-0.01,0.04,2.91,1.04,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","ACAACAATGTCTGACG",2,81.68,9.91,-0.86,0.07,1.98,1.03,0,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","ACAACAATTCAGATAT",5,20.42,6,-4.76,1.65,3,1.06,0,">1 nonsynonymous","I88Y F156W S200P",3
"lib1","SARS-CoV-2","ACAACAATTCATGTGA",3,75.43,10.84,0.08,0.07,2.89,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAACAATTTGAAAAG",4,83.36,10.76,0,0.08,2.92,1.03,0,">1 nonsynonymous","L60C T201C",2
"lib1","SARS-CoV-2","ACAACACAAATCGCTA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","V77* A105L T201A",3
"lib1","SARS-CoV-2","ACAACACAAATTTCTA",1,31.75,10.54,-0.22,0.11,2.75,1.18,0,">1 nonsynonymous","L60E S129A",2
"lib1","SARS-CoV-2","ACAACACACGATATAA",4,24.07,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8P P149Q V181S",3
"lib1","SARS-CoV-2","ACAACACACTAAATTC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78D D137L V173I",3
"lib1","SARS-CoV-2","ACAACACACTAACCAG",4,95.5,10.09,-0.67,0.1,2.36,1,0,">1 nonsynonymous","L5M N24E R127H T148M",4
"lib1","SARS-CoV-2","ACAACACACTAATCGT",3,146.09,9.32,-1.45,0.07,2.88,1.09,0,">1 nonsynonymous","Y119P K132L",2
"lib1","SARS-CoV-2","ACAACACATTACGAGT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P N13R C102K C158S",4
"lib1","SARS-CoV-2","ACAACACCCTGCCATT",3,2.03,NA,NA,NA,NA,NA,NA,"stop","S45* A81S S129F E141A",4
"lib1","SARS-CoV-2","ACAACACCTTTCTGGT",5,95.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y35N C102F N120S F134I E141W G166T",6
"lib1","SARS-CoV-2","ACAACACCTTTGTAGG",4,33.93,10.15,-0.62,0.13,2.6,1,0.01,">1 nonsynonymous","T15I D97F",2
"lib1","SARS-CoV-2","ACAACACGAGGCTCAA",1,49.48,10.64,-0.13,0.09,2.88,1.12,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","ACAACACGGAGCCTAA",2,35.56,10.79,0.03,0.09,2.81,1.08,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","ACAACACGGCCTAACC",5,31.13,6,-4.76,1.5,3,1.18,0.01,">1 nonsynonymous","R27E D34H D68R Y91L",4
"lib1","SARS-CoV-2","ACAACACTGCCAACCT",12,91.33,10.17,-0.6,0.05,2.35,1,0,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","ACAACACTTATTATTT",2,14.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84V D98T R127T L162M",4
"lib1","SARS-CoV-2","ACAACACTTTCACCAC",2,37.16,10.76,0,0.08,2.86,1.12,0,">1 nonsynonymous","L5N R16N",2
"lib1","SARS-CoV-2","ACAACAGAATACCCGA",6,145.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100H I142G G172Y T201G",4
"lib1","SARS-CoV-2","ACAACAGAATTAAGAA",18,259.54,6.1,-4.67,0.62,1.5,1.14,0.01,">1 nonsynonymous","C158G S164L",2
"lib1","SARS-CoV-2","ACAACAGAGTGTTGTT",2,27.62,6.52,-4.24,0.59,1.5,1.13,0.04,">1 nonsynonymous","V32W S43R N120K R127V",4
"lib1","SARS-CoV-2","ACAACAGCAAGAAAAC",4,34.83,9.78,-0.98,0.12,1.78,1.09,0.01,">1 nonsynonymous","L57R Y66S E141K",3
"lib1","SARS-CoV-2","ACAACAGCAATTCATC",7,115.11,9.82,-0.94,0.09,2.07,1.05,0,">1 nonsynonymous","F62C A89N",2
"lib1","SARS-CoV-2","ACAACAGCATAATAGC",8,81.44,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F17L S36V A89C G152F",4
"lib1","SARS-CoV-2","ACAACAGCTTCAATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110E F134T C150I",3
"lib1","SARS-CoV-2","ACAACAGGACCACGCG",8,48.59,6.74,-4.02,0.57,1.5,1.23,0.04,">1 nonsynonymous","E10K T15F D98S G146Q",4
"lib1","SARS-CoV-2","ACAACAGGATACAAAA",5,39.87,9.38,-1.38,0.27,1.51,1.15,0.03,">1 nonsynonymous","Q84M P96I F160W",3
"lib1","SARS-CoV-2","ACAACAGGCGGATGAA",3,7.29,9.53,-1.23,0.49,1.5,1.26,0.07,">1 nonsynonymous","N13Y V37L F62L Q84N",4
"lib1","SARS-CoV-2","ACAACAGGGGATATCT",2,13.85,10.27,-0.49,0.16,2.7,1.13,0.01,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","ACAACAGGGTTGGATA",1,19.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I80K K94Y T201E",3
"lib1","SARS-CoV-2","ACAACAGTAACCAGCC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","Y35Q D97*",2
"lib1","SARS-CoV-2","ACAACAGTGGCTCAAC",7,45.88,10.7,-0.06,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACATAAAAACGCA",2,50.3,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T85F G155A G166M Y175T",4
"lib1","SARS-CoV-2","ACAACATAAAACACGA",3,117.97,10.77,0.01,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACATAAACAAACG",1,22.59,10.87,0.11,0.14,2.89,1.02,0.01,"1 nonsynonymous","P149N",1
"lib1","SARS-CoV-2","ACAACATAGAAAGCGG",16,0.66,NA,NA,NA,NA,NA,NA,"stop","L57* V71* E76S D97P C150I E154D F156E",7
"lib1","SARS-CoV-2","ACAACATAGTCATGTT",1,67.33,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T46V F134T Y159R",3
"lib1","SARS-CoV-2","ACAACATATAAGTGTT",1,27.42,6.13,-4.63,0.3,3,1.14,0,">1 nonsynonymous","T63A C158S H189Y",3
"lib1","SARS-CoV-2","ACAACATCATGCTTTG",6,142.19,9.25,-1.52,0.09,2.53,1.14,0,">1 nonsynonymous","Y39H Y119R S129A F134A",4
"lib1","SARS-CoV-2","ACAACATCCGCCTCAC",5,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104H Y123N E186L",3
"lib1","SARS-CoV-2","ACAACATCTTGTTACT",1,24.13,6.22,-4.55,0.47,1.5,1.13,0.01,">1 nonsynonymous","S36R A89V L111G P149D",4
"lib1","SARS-CoV-2","ACAACATGACAGCTGG",1,13.2,10.09,-0.68,0.21,2.69,1.01,0.01,">1 nonsynonymous","D34Y S129R",2
"lib1","SARS-CoV-2","ACAACATGACCATGAT",1,6.93,8.04,-2.72,0.49,1.5,1.12,0.05,">1 nonsynonymous","G86E D97S S200T",3
"lib1","SARS-CoV-2","ACAACATGACTTTAAT",6,0.51,NA,NA,NA,NA,NA,NA,"stop","W23C N24D F126P K132S N151Y K198*",6
"lib1","SARS-CoV-2","ACAACATGCTGATAAT",1,9.46,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","V37L C49I E135M Y143W",4
"lib1","SARS-CoV-2","ACAACATGGACAGTTC",4,49.86,6.76,-4.01,0.28,1.5,1.13,0.01,">1 nonsynonymous","P82M K114G",2
"lib1","SARS-CoV-2","ACAACATGTCCACGCT",6,56.62,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K56Y A81T F99W G152I",4
"lib1","SARS-CoV-2","ACAACATTAAAGACCG",6,15.36,6,-4.76,2,1.5,1.22,0.05,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","ACAACATTAGGAGTGT",13,224.81,10.42,-0.34,0.03,2.91,1.04,0,">1 nonsynonymous","T46C C61E",2
"lib1","SARS-CoV-2","ACAACATTGTAAATAT",8,67.55,10.27,-0.49,0.04,2.88,1.03,0,">1 nonsynonymous","I28L C61R D98Y H189L",4
"lib1","SARS-CoV-2","ACAACATTGTTAACAA",3,35.37,6.22,-4.55,0.86,1.5,1.33,0.04,"1 nonsynonymous","V103Y",1
"lib1","SARS-CoV-2","ACAACATTTAACAAAC",2,18.02,7.08,-3.68,0.53,1.5,1,0.07,">1 nonsynonymous","C6F K26A F99Y E141Q S147I V173R",6
"lib1","SARS-CoV-2","ACAACATTTGTATTCA",1,61.93,10.4,-0.36,0.07,2.79,1.08,0,">1 nonsynonymous","F44Q I138L",2
"lib1","SARS-CoV-2","ACAACCAAAGAATAAG",8,59.4,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","Y39P D98L Q176R",3
"lib1","SARS-CoV-2","ACAACCAAAGCGACAC",6,0.66,NA,NA,NA,NA,NA,NA,"stop","C61* G146R",2
"lib1","SARS-CoV-2","ACAACCAACATAAGAC",6,44.02,10.69,-0.08,0.08,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACCAATTGTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85L D98R Y121* E141G",4
"lib1","SARS-CoV-2","ACAACCACAAAACTTA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","T100* E135L Y159M",3
"lib1","SARS-CoV-2","ACAACCACCGATACAA",2,111.17,9.53,-1.24,0.08,2.75,1.07,0,">1 nonsynonymous","G74A L111R",2
"lib1","SARS-CoV-2","ACAACCACGAAGCAAT",21,271.15,10.04,-0.73,0.05,2.79,1.03,0,">1 nonsynonymous","C6D V37R D98S",3
"lib1","SARS-CoV-2","ACAACCATAGTTCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10I S36* A42T S53V D90L D112T G152L P197R",8
"lib1","SARS-CoV-2","ACAACCCCAATAAACT",4,48.98,10.8,0.03,0.04,2.95,1.03,0,">1 nonsynonymous","N130K V173N",2
"lib1","SARS-CoV-2","ACAACCCCGATACCCT",3,106.86,10.75,-0.01,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACCCTAAATTAAC",10,272.43,9.55,-1.22,0.09,2.62,1.07,0,">1 nonsynonymous","L5G S29L E154L",3
"lib1","SARS-CoV-2","ACAACCCTCTAACATA",4,47.44,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D98P S139H G155T F167A S184V",5
"lib1","SARS-CoV-2","ACAACCCTGAGGTATG",7,53.97,9.54,-1.22,0.12,2.48,1.14,0.01,">1 nonsynonymous","N107G S164E",2
"lib1","SARS-CoV-2","ACAACCCTTAGCAGAT",6,35.29,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","F8L G9M F44R C49N R127G G146T",6
"lib1","SARS-CoV-2","ACAACCGACATATATC",6,128.7,10.76,0,0.05,2.89,1.06,0,"1 nonsynonymous","T3A",1
"lib1","SARS-CoV-2","ACAACCGAGTCTACAC",2,13.61,10.78,0.02,0.08,2.99,1.01,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","ACAACCGATTCCTGGA",4,160.59,10.38,-0.39,0.05,2.89,1.07,0,">1 nonsynonymous","I2S G9K V103I",3
"lib1","SARS-CoV-2","ACAACCGATTTGACCG",2,21.49,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P82S C150K G172P",3
"lib1","SARS-CoV-2","ACAACCGCCGATAGAT",5,19.65,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S36Q R124V G152F F156L",4
"lib1","SARS-CoV-2","ACAACCGGACGATGAA",12,81.42,10.31,-0.45,0.12,1.99,1.07,0.01,"1 nonsynonymous","E76V",1
"lib1","SARS-CoV-2","ACAACCGGCTTACGGC",2,53.36,9.66,-1.11,0.1,2.07,1.07,0,">1 nonsynonymous","A18K I72L G152F",3
"lib1","SARS-CoV-2","ACAACCGTGGAGTCTA",3,74.64,10.68,-0.08,0.04,2.96,1.02,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","ACAACCTAAAATAGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","G51N L57D W106*",3
"lib1","SARS-CoV-2","ACAACCTACAATGAGC",3,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G Y39D K56G G86N D97Y T201V",6
"lib1","SARS-CoV-2","ACAACCTAGATTCATA",5,48.27,10.96,0.19,0.08,2.87,1.04,0,">1 nonsynonymous","I28Y L57Y N171T L187K",4
"lib1","SARS-CoV-2","ACAACCTATGGATCGT",3,62.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61W G101M R124C R179T",4
"lib1","SARS-CoV-2","ACAACCTCATCTACGT",3,60.24,7.07,-3.7,0.18,1.79,1.11,0.01,">1 nonsynonymous","Q84M C150Q",2
"lib1","SARS-CoV-2","ACAACCTCCAAAATGT",6,0.62,NA,NA,NA,NA,NA,NA,"stop","T15R C31A K94*",3
"lib1","SARS-CoV-2","ACAACCTCTTCCGAGA",2,77.86,6,-4.76,1.37,1.5,1.15,0.01,">1 nonsynonymous","G83A G101H P177V",3
"lib1","SARS-CoV-2","ACAACCTGAATTAGAT",5,19.89,6,-4.76,2,3,1.35,0.02,">1 nonsynonymous","E10L G83F G116T C158K",4
"lib1","SARS-CoV-2","ACAACCTGACCATTCA",4,40.72,10.55,-0.22,0.09,2.92,1,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","ACAACCTGCCCTTTAA",2,39.7,10.77,0.01,0.06,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACCTGGTGATTGC",1,1.06,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib1","SARS-CoV-2","ACAACCTTCTAGAGGT",2,9.79,9.58,-1.19,0.17,2.13,1.15,0.01,">1 nonsynonymous","N4R Y66I N107R",3
"lib1","SARS-CoV-2","ACAACGAACAACGGAG",2,91.21,6.1,-4.66,1.09,1.5,1.18,0.03,">1 nonsynonymous","I2K V71A L162R",3
"lib1","SARS-CoV-2","ACAACGAACTAAAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40S T55* A67D L95P",4
"lib1","SARS-CoV-2","ACAACGAACTTGACAA",2,6.44,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","V77T A89P Y175S",3
"lib1","SARS-CoV-2","ACAACGAAGAACTCAA",1,57.98,8.78,-1.99,0.11,1.87,1.17,0,">1 nonsynonymous","Y91E T201L",2
"lib1","SARS-CoV-2","ACAACGAAGCAAGAAC",9,112.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31A P161W",2
"lib1","SARS-CoV-2","ACAACGAAGCTAGTCA",1,27.96,10.73,-0.03,0.07,2.93,1.04,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","ACAACGACTACGAACA",7,53.93,10.78,0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACGACTCTACTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V65* I142K",2
"lib1","SARS-CoV-2","ACAACGATTAAGACAC",6,87.68,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G86V D97M C150R",3
"lib1","SARS-CoV-2","ACAACGCACTGCTATG",6,80.77,6,-4.76,0.46,1.5,1.14,0,">1 nonsynonymous","C61K S113I N157S",3
"lib1","SARS-CoV-2","ACAACGCATAGTAAAA",13,11.8,NA,NA,NA,NA,NA,NA,"stop","A14Q K26D V37L C61G Y91* E154D",6
"lib1","SARS-CoV-2","ACAACGCCCCAACCCC",2,45.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10R G51M T63H P177Y",4
"lib1","SARS-CoV-2","ACAACGCCGCAACTAA",4,33.21,10.68,-0.08,0.08,2.82,1.09,0,">1 nonsynonymous","T3N T201W",2
"lib1","SARS-CoV-2","ACAACGCGCTTTAAAA",4,92.44,10.7,-0.07,0.02,2.96,1.02,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","ACAACGCGTTCTTGGA",1,6.23,6,-4.76,2,1.5,1.07,0,"1 nonsynonymous","V103H",1
"lib1","SARS-CoV-2","ACAACGCTAGACTTGT",5,76.77,10.59,-0.18,0.05,2.94,1.04,0,"1 nonsynonymous","R27P",1
"lib1","SARS-CoV-2","ACAACGCTCAGACCAA",4,4.57,NA,NA,NA,NA,NA,NA,"stop","T15R I80* Q144T T170A",4
"lib1","SARS-CoV-2","ACAACGCTGCAGATAA",3,13.87,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","T15G R25S R124P S139I T148A Q176F V181S",7
"lib1","SARS-CoV-2","ACAACGGAATCCAATC",2,94.95,9,-1.76,0.07,2.4,1.11,0,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","ACAACGGACTTATGCA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","E10A S19* G83D I88D T148K Q176*",6
"lib1","SARS-CoV-2","ACAACGGATGGCATTA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18I G155V T201G",3
"lib1","SARS-CoV-2","ACAACGGATTGTATTA",8,61.65,10.7,-0.06,0.05,2.89,1.07,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","ACAACGGGATAGACAT",11,95.78,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S53F L60Y A89K V103W",4
"lib1","SARS-CoV-2","ACAACGGGCTATAAGC",1,9.8,10.78,0.01,0.09,2.75,1.19,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","ACAACGGGTGAAAAAC",2,58.22,10.39,-0.37,0.05,2.9,1,0,">1 nonsynonymous","T3W T100N",2
"lib1","SARS-CoV-2","ACAACGGGTGCTGAAT",4,8.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12L P177G",2
"lib1","SARS-CoV-2","ACAACGGTACTTAAGG",8,32.13,9.33,-1.44,0.12,1.69,1.13,0,">1 nonsynonymous","T63N P96M T201Y",3
"lib1","SARS-CoV-2","ACAACGGTATAGCCGA",19,322.88,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L38P C61A R73S N107H D112I V173Y",6
"lib1","SARS-CoV-2","ACAACGGTCAGTGGAT",4,60.26,6.82,-3.95,0.45,1.6,1.17,0.02,">1 nonsynonymous","R73A T100L S113Y",3
"lib1","SARS-CoV-2","ACAACGTACGATACAC",1,10.24,8.86,-1.9,0.21,1.5,1.15,0.02,">1 nonsynonymous","R25A T55L",2
"lib1","SARS-CoV-2","ACAACGTAGGTTCTCC",1,26.98,10.76,0,0.06,2.9,1.05,0,"1 nonsynonymous","Q163H",1
"lib1","SARS-CoV-2","ACAACGTCTACTCACG",1,24.15,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","I80K Y165E V173T",3
"lib1","SARS-CoV-2","ACAACGTGCTTGAACG",2,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P F44W G51Y D68M D75A N157I",6
"lib1","SARS-CoV-2","ACAACGTTTTACTAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41W T46L V52R D68I I142* F167C G174L S200N",8
"lib1","SARS-CoV-2","ACAACTAACATTATAC",1,5.04,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y50P Q84W P96T P197S",4
"lib1","SARS-CoV-2","ACAACTAACCCTTATA",7,90.9,10.21,-0.55,0.09,2.66,1,0,">1 nonsynonymous","R27L I88L L122S",3
"lib1","SARS-CoV-2","ACAACTAACCTCCACA",2,26.11,10.19,-0.58,0.15,2.34,1,0.01,">1 nonsynonymous","C49W K56S Q84R S139T",4
"lib1","SARS-CoV-2","ACAACTAATGTTTAGA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","I2T K87* P96Y L131I S147P T201S",6
"lib1","SARS-CoV-2","ACAACTACAACTGGAT",3,79.71,10.69,-0.08,0.05,2.94,1.02,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","ACAACTACACTCGACC",5,108.69,8.89,-1.87,0.07,2.28,1.09,0,">1 nonsynonymous","G9S F62Y Q176R",3
"lib1","SARS-CoV-2","ACAACTACATACCCGA",2,39.18,10.62,-0.15,0.07,2.98,1,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","ACAACTACCAACCTTG",7,100.1,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C31F S45N C150A",3
"lib1","SARS-CoV-2","ACAACTAGATGGCGAG",10,45.76,8.44,-2.33,0.14,1.78,1.18,0.01,">1 nonsynonymous","L38C G116Y",2
"lib1","SARS-CoV-2","ACAACTAGATTCTCTA",1,51.89,7.34,-3.43,0.26,1.5,1.2,0.02,">1 nonsynonymous","A105Y F134K",2
"lib1","SARS-CoV-2","ACAACTAGCAACACAA",4,37.24,6,-4.76,2,2.32,1.26,0.01,">1 nonsynonymous","T3A C61K R136T P161V",4
"lib1","SARS-CoV-2","ACAACTAGTATATCAT",1,14.9,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","L38A Y50D K56R W106R V173T",5
"lib1","SARS-CoV-2","ACAACTATATTGAATA",2,6.18,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4S V65S K94A G101W G166T",5
"lib1","SARS-CoV-2","ACAACTATCATTTTAG",3,31.06,9.18,-1.59,0.06,2.87,1.07,0,">1 nonsynonymous","N64D G117N",2
"lib1","SARS-CoV-2","ACAACTATCTCCCCAA",1,1.01,NA,NA,NA,NA,NA,NA,"stop","E10C T46*",2
"lib1","SARS-CoV-2","ACAACTATCTCTCTCG",5,10,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T15R S36V S43L C102R G146W",5
"lib1","SARS-CoV-2","ACAACTATGATACCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","T3L G9R S41* L122R",4
"lib1","SARS-CoV-2","ACAACTATTATTAAAA",1,10.5,10.5,-0.26,0.14,2.9,1,0.01,">1 nonsynonymous","A42L N58R",2
"lib1","SARS-CoV-2","ACAACTATTTACGAAA",7,122.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y S45E W106N",3
"lib1","SARS-CoV-2","ACAACTCAAGCCTCGG",2,57.05,10.53,-0.24,0.11,2.78,1.14,0,">1 nonsynonymous","V32S P54R",2
"lib1","SARS-CoV-2","ACAACTCACTCCCAAG",1,10.46,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","K94G N157P",2
"lib1","SARS-CoV-2","ACAACTCACTTATTAT",1,44.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37N S53F Y143D P149T",4
"lib1","SARS-CoV-2","ACAACTCATATATGTT",1,83.99,9.8,-0.97,0.13,2,1.06,0.01,">1 nonsynonymous","L5W V11S",2
"lib1","SARS-CoV-2","ACAACTCCGCTAAGCA",6,48.64,10.65,-0.11,0.12,2.86,1.02,0,">1 nonsynonymous","N64V T100C",2
"lib1","SARS-CoV-2","ACAACTCCTTATACTA",5,65.93,10.73,-0.03,0.08,2.86,1.09,0,"1 nonsynonymous","N171I",1
"lib1","SARS-CoV-2","ACAACTCGAATGACTT",5,28.98,8.76,-2.01,0.21,1.59,1.18,0.02,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","ACAACTCGCTAAGTTA",1,5.41,6,-4.76,2,3,1,0,">1 nonsynonymous","G86L L122E K128R T140W",4
"lib1","SARS-CoV-2","ACAACTCGTATACCCA",2,49.76,8.44,-2.32,0.11,2.96,1.06,0.01,">1 nonsynonymous","D90E G166D",2
"lib1","SARS-CoV-2","ACAACTCTAACATTTA",1,45.72,8.79,-1.98,0.11,2.21,1.22,0.01,">1 nonsynonymous","L60G D112E",2
"lib1","SARS-CoV-2","ACAACTCTAATCCGCA",5,293.68,9.16,-1.6,0.08,2.14,1.08,0,">1 nonsynonymous","G51C V103P R127S G174W",4
"lib1","SARS-CoV-2","ACAACTCTAATTATAG",2,43.83,10.71,-0.06,0.1,2.84,1.08,0,">1 nonsynonymous","S41Q K198R",2
"lib1","SARS-CoV-2","ACAACTCTCAAAGAAT",4,117.89,10.06,-0.7,0.08,2.76,1.03,0,">1 nonsynonymous","A42Q G83T G174P T201R",4
"lib1","SARS-CoV-2","ACAACTCTTACAGTAA",6,51.45,9.53,-1.24,0.12,1.81,1.13,0.01,">1 nonsynonymous","E10L Q84P P197M",3
"lib1","SARS-CoV-2","ACAACTGAACCAACGG",2,0.96,NA,NA,NA,NA,NA,NA,"stop","T15V R27* S113R L125R P133S",5
"lib1","SARS-CoV-2","ACAACTGAACTGGGGT",9,96.47,10.82,0.06,0.07,2.94,1.04,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ACAACTGATCAAACTA",3,10.47,6.37,-4.39,1.22,1.5,1.08,0.01,">1 nonsynonymous","D59S G116S R179G",3
"lib1","SARS-CoV-2","ACAACTGGAAGCACAC",5,99.77,10.05,-0.72,0.07,2.72,1,0,">1 nonsynonymous","I28V A81G T148M",3
"lib1","SARS-CoV-2","ACAACTGGACTTTGCA",1,12.36,6,-4.76,2,3,1.16,0,"1 nonsynonymous","Y93K",1
"lib1","SARS-CoV-2","ACAACTGGCCCACCAC",4,58.62,10.76,0,0.03,2.95,1.04,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ACAACTGGCGATTCCC",1,19.61,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","A14V S45T N107T Y119A I142Y",5
"lib1","SARS-CoV-2","ACAACTGTAGAAACTA",1,14.14,10.53,-0.23,0.1,2.94,1,0.01,">1 nonsynonymous","T140L N151S",2
"lib1","SARS-CoV-2","ACAACTGTATAATCAA",9,116.85,9.76,-1,0.05,2.67,1.05,0,">1 nonsynonymous","K48L V173P",2
"lib1","SARS-CoV-2","ACAACTTAAAGAAATG",10,22.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91K W106R",2
"lib1","SARS-CoV-2","ACAACTTAACATATCC",19,101.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51S Y121K S139Y",3
"lib1","SARS-CoV-2","ACAACTTACATCGATG",4,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q A33T",2
"lib1","SARS-CoV-2","ACAACTTCACGCCTTT",8,100,10.67,-0.09,0.05,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAACTTGGAGTATCT",4,47.65,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G86T L122T N130S T140P G166F",5
"lib1","SARS-CoV-2","ACAACTTTATATTTAG",4,0.49,NA,NA,NA,NA,NA,NA,"stop","T3E E10* S19K N64R G101S",5
"lib1","SARS-CoV-2","ACAACTTTATCAAGAC",4,99.41,10.79,0.03,0.08,2.82,1.12,0,"1 nonsynonymous","I28L",1
"lib1","SARS-CoV-2","ACAACTTTATTTGCGC",8,124.31,9.87,-0.89,0.1,2.08,1.04,0,">1 nonsynonymous","G9L S36R T85P",3
"lib1","SARS-CoV-2","ACAACTTTTAAGGGCG",2,9.57,7.46,-3.3,0.24,1.5,1.17,0.02,">1 nonsynonymous","N40S L60A D98S D112Q G166P",5
"lib1","SARS-CoV-2","ACAACTTTTCAGATTT",3,37.31,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C61V I88N N107H",3
"lib1","SARS-CoV-2","ACAAGAAAACATCTCA",2,116.43,10.67,-0.1,0.03,2.88,1.06,0,">1 nonsynonymous","Y66L Q144S P149R P197Y",4
"lib1","SARS-CoV-2","ACAAGAAAACTGCCAA",2,44.58,8.58,-2.18,0.08,2.55,1.06,0,">1 nonsynonymous","F44H G117L",2
"lib1","SARS-CoV-2","ACAAGAAAATCGTTTA",2,21,7.57,-3.2,0.26,1.5,1.09,0.03,">1 nonsynonymous","V37Q T85N Q144P F156L V182T",5
"lib1","SARS-CoV-2","ACAAGAAAGAACATAA",2,6.9,7.15,-3.62,0.17,2.01,1.07,0,">1 nonsynonymous","S129L D137K",2
"lib1","SARS-CoV-2","ACAAGAAAGCATACTA",2,17.69,10.67,-0.1,0.06,2.92,1.06,0,"1 nonsynonymous","S139G",1
"lib1","SARS-CoV-2","ACAAGAAATCTTCGTC",2,50.48,10.78,0.01,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGAACAAAAATAC",5,24.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F8L F99K E154G",3
"lib1","SARS-CoV-2","ACAAGAACACTATGGG",1,34.5,9.32,-1.44,0.1,2.76,1.13,0,">1 nonsynonymous","F156K P169A S200R",3
"lib1","SARS-CoV-2","ACAAGAACAGATAACT",10,164.77,10.73,-0.03,0.06,2.91,1.01,0,">1 nonsynonymous","F47V P197N",2
"lib1","SARS-CoV-2","ACAAGAACAGCATATG",8,68.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50L G83V Y91V G116F R179K",5
"lib1","SARS-CoV-2","ACAAGAACTACGACAA",1,17.06,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","E10G R27S V37Q Y119T R136L T148G S184F",7
"lib1","SARS-CoV-2","ACAAGAAGAAACTGTG",10,99.68,9.26,-1.5,0.25,1.5,1,0.02,">1 nonsynonymous","S45T V71K E141D E154I",4
"lib1","SARS-CoV-2","ACAAGAAGACTGATAT",9,172.47,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36L I80E S129A Y143S",4
"lib1","SARS-CoV-2","ACAAGAAGTTAACCAC",6,8.98,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","S36W C61M D90R F167N",4
"lib1","SARS-CoV-2","ACAAGAATAAACAACG",5,13.38,NA,NA,NA,NA,NA,NA,"stop","I28S S36* V103S S164I G166D",5
"lib1","SARS-CoV-2","ACAAGAATAAAGAAAC",5,21.93,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V65R D97Y P149L Y165L G172N",5
"lib1","SARS-CoV-2","ACAAGAATCGATGACT",4,76.24,6,-4.76,1.6,1.5,1.12,0,">1 nonsynonymous","F12K I138T E154M P161G",4
"lib1","SARS-CoV-2","ACAAGAATCTGTATCC",9,63.6,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C49N S69T K87M R127S F160C A190E",6
"lib1","SARS-CoV-2","ACAAGAATTGACGTAA",4,19.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L122G G155A V181R",3
"lib1","SARS-CoV-2","ACAAGACAAAGCTAAT",3,101.93,9.61,-1.16,0.07,2.7,1.12,0,">1 nonsynonymous","C61F T140S P169Q",3
"lib1","SARS-CoV-2","ACAAGACACCACTCTC",1,13.36,8.6,-2.17,0.44,1.5,1,0.08,">1 nonsynonymous","L38R R73M",2
"lib1","SARS-CoV-2","ACAAGACAGTTTAGAC",5,108.47,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I2Y D90T F99L Y175A",4
"lib1","SARS-CoV-2","ACAAGACATCACGAAC",1,6.11,9.47,-1.29,0.23,2.07,1,0.01,">1 nonsynonymous","K128I D137S",2
"lib1","SARS-CoV-2","ACAAGACCCAAAAAAG",4,34.72,9.63,-1.14,0.21,1.89,1.16,0.02,">1 nonsynonymous","Y35F F62R V77M S147K P197M",5
"lib1","SARS-CoV-2","ACAAGACCCATGAAAG",6,109.86,10.76,0,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGACCCATTGAGA",2,18.05,10.69,-0.07,0.07,2.86,1.07,0,">1 nonsynonymous","N1T A22H S41N H189S",4
"lib1","SARS-CoV-2","ACAAGACCCTTACTAA",2,20.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L F99H",2
"lib1","SARS-CoV-2","ACAAGACCGGCTTGCT",6,41.59,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N58W W106C K128H G166R",4
"lib1","SARS-CoV-2","ACAAGACCTAGAACGG",3,47.46,10.75,-0.02,0.05,2.98,1,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","ACAAGACCTTTAGACA",6,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M T55S S184Y",3
"lib1","SARS-CoV-2","ACAAGACGAAATCACT",7,54.8,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23F P82S A89M Y119C F167M",5
"lib1","SARS-CoV-2","ACAAGACTATACAAAT",2,27.42,9.04,-1.72,0.24,1.5,1.15,0.02,">1 nonsynonymous","V37G F44C D97K A105S S129Y",5
"lib1","SARS-CoV-2","ACAAGACTATATGTCA",4,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q T15V A89I T140R L162E S184N",6
"lib1","SARS-CoV-2","ACAAGACTTCCAGTCG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","P96F Y121* R127P T140R P161N A192*",6
"lib1","SARS-CoV-2","ACAAGACTTGACGATG",1,22.2,9.32,-1.44,0.16,2.67,1.15,0.01,">1 nonsynonymous","G74E A192T",2
"lib1","SARS-CoV-2","ACAAGACTTGGCGTTT",2,28.1,10.73,-0.04,0.07,2.81,1.1,0,">1 nonsynonymous","P54L S129C",2
"lib1","SARS-CoV-2","ACAAGAGAACGTCAAA",3,56.68,10.75,-0.02,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGAGAAGCATTGC",3,197.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28P L111S",2
"lib1","SARS-CoV-2","ACAAGAGATGTTCCCA",4,155.27,9.92,-0.85,0.04,2.82,1.04,0,">1 nonsynonymous","P7K T55V V153P",3
"lib1","SARS-CoV-2","ACAAGAGATTAGCATG",1,63.05,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44S E141G G152F Y175S S200Y",5
"lib1","SARS-CoV-2","ACAAGAGGATTCTCGC",2,43.59,9.79,-0.97,0.15,2.02,1.09,0.01,">1 nonsynonymous","F62S P133L",2
"lib1","SARS-CoV-2","ACAAGAGGCAACATAA",2,73.72,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L95A N171G",2
"lib1","SARS-CoV-2","ACAAGAGTACGAGAAC",6,78.25,10.81,0.04,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGAGTCAAATATA",7,35.35,10.78,0.02,0.08,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAAGAGTGGTTATCC",1,9.49,8.51,-2.25,0.32,2.83,1.06,0.02,">1 nonsynonymous","T85K Y159P",2
"lib1","SARS-CoV-2","ACAAGATAAACACGGC",2,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I N120R Y178P",3
"lib1","SARS-CoV-2","ACAAGATACATAGGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55W N107A K199V",3
"lib1","SARS-CoV-2","ACAAGATACTGATCGA",11,54.36,7.71,-3.05,0.26,1.5,1.03,0.02,">1 nonsynonymous","V11G F44S G174E",3
"lib1","SARS-CoV-2","ACAAGATATACGAACT",3,60.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38D C49G Y91L",3
"lib1","SARS-CoV-2","ACAAGATATATGGTAG",6,10.24,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49G A81W",2
"lib1","SARS-CoV-2","ACAAGATATGAACCTG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","F44* L95K S139I",3
"lib1","SARS-CoV-2","ACAAGATCCATTCTTT",3,10.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T63W R124E P133I",3
"lib1","SARS-CoV-2","ACAAGATGAATAGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F44R I142* T148P Y159S",4
"lib1","SARS-CoV-2","ACAAGATGAGTCGCAA",5,15.21,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","D90I K132Y L183S",3
"lib1","SARS-CoV-2","ACAAGATGCCTTCTAT",3,37.57,10.39,-0.38,0.05,2.8,1.03,0,">1 nonsynonymous","N1Y P54L D90T",3
"lib1","SARS-CoV-2","ACAAGATGCTGCATAC",4,48.84,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T46I Y93L F99R A105T N110L",5
"lib1","SARS-CoV-2","ACAAGATGTAATTAGA",6,100.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y123V C150H S200H",3
"lib1","SARS-CoV-2","ACAAGATTCAAAGTTC",4,36.32,6.96,-3.8,0.49,1.53,1.16,0.06,">1 nonsynonymous","G9K W106I T140W S164L",4
"lib1","SARS-CoV-2","ACAAGATTCCTGTTGT",1,14.64,10.23,-0.54,0.08,2.97,1.05,0,">1 nonsynonymous","N40D C61H I138R",3
"lib1","SARS-CoV-2","ACAAGATTCTTTAACG",1,16.67,10.07,-0.69,0.14,2.89,1.04,0.01,">1 nonsynonymous","K87C K114L",2
"lib1","SARS-CoV-2","ACAAGCAAAACATGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","ACAAGCAATCGCGAAG",5,55.43,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V77R K94S T100P",3
"lib1","SARS-CoV-2","ACAAGCAATGAACAAT",1,13.54,10.2,-0.56,0.07,2.84,1.01,0,">1 nonsynonymous","V37S S43Y R73M",3
"lib1","SARS-CoV-2","ACAAGCACCAACCGAT",4,61.97,8.58,-2.19,0.07,2.47,1.05,0,">1 nonsynonymous","Q79K N171L",2
"lib1","SARS-CoV-2","ACAAGCACCATACCAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib1","SARS-CoV-2","ACAAGCAGAACACTAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","N120L F167D K199*",3
"lib1","SARS-CoV-2","ACAAGCATAAACATTA",1,32.67,6.25,-4.51,0.7,1.5,1.22,0.03,">1 nonsynonymous","D90A W106G E154L",3
"lib1","SARS-CoV-2","ACAAGCATGCATAAAC",4,56.48,9.55,-1.21,0.34,1.5,1,0.05,">1 nonsynonymous","N1W Y50R",2
"lib1","SARS-CoV-2","ACAAGCATTTGCAAAG",5,76.01,6.32,-4.45,0.48,1.5,1.22,0.01,">1 nonsynonymous","A81K K114L P177S",3
"lib1","SARS-CoV-2","ACAAGCCAATATTTAG",12,74.92,6.66,-4.1,0.45,1.5,1.2,0.02,">1 nonsynonymous","S69I E135W",2
"lib1","SARS-CoV-2","ACAAGCCACGTAAAAT",13,106.77,8.72,-2.04,0.28,1.5,1,0.04,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","ACAAGCCACTAAGTAA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L W106S S129L",3
"lib1","SARS-CoV-2","ACAAGCCATTAAGCCT",2,70.73,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20S V32A F47T L95S",4
"lib1","SARS-CoV-2","ACAAGCCGCGAATTAA",4,65.85,9.65,-1.12,0.1,2.42,1.06,0,">1 nonsynonymous","C6A A14T T201V",3
"lib1","SARS-CoV-2","ACAAGCCGGAACGTTT",3,13.99,6.48,-4.28,0.33,1.5,1.04,0.01,">1 nonsynonymous","F8R K26Q K94L",3
"lib1","SARS-CoV-2","ACAAGCCTGGCAGTTA",10,102.75,8,-2.76,0.19,1.75,1.16,0.01,">1 nonsynonymous","F8M S113W T201M",3
"lib1","SARS-CoV-2","ACAAGCCTTGTATAAT",4,22.54,7.23,-3.53,0.25,1.59,1.18,0.02,">1 nonsynonymous","K26V T46C R73H",3
"lib1","SARS-CoV-2","ACAAGCGAGTCAGCTT",4,88.75,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","T55L T63D I142R R179G",4
"lib1","SARS-CoV-2","ACAAGCGCAATACGAA",4,33.39,10.71,-0.06,0.04,2.95,1,0,">1 nonsynonymous","R27V N120Y",2
"lib1","SARS-CoV-2","ACAAGCGCATAATAGT",18,172.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56L D98G K128D T140V N151S R179Y",6
"lib1","SARS-CoV-2","ACAAGCGTTGTTCATG",1,10.56,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5E N58T W106P T140P",4
"lib1","SARS-CoV-2","ACAAGCTAACAGAAAT",13,126.18,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N4S Y35Q D90Y F99N R127P T140N",6
"lib1","SARS-CoV-2","ACAAGCTACGCACTAA",5,81.59,6,-4.76,1.84,1.5,1.24,0.03,">1 nonsynonymous","N64R F99Y Y121V",3
"lib1","SARS-CoV-2","ACAAGCTACTGTTTAA",2,85.74,10.51,-0.26,0.06,2.8,1.05,0,">1 nonsynonymous","T3R L60W",2
"lib1","SARS-CoV-2","ACAAGCTCAAGAAATG",5,57.75,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N4G Y91T F99H R127E",4
"lib1","SARS-CoV-2","ACAAGCTCCTTTTGCA",4,23.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9R I28S F99M",3
"lib1","SARS-CoV-2","ACAAGCTGAAATTTTG",2,30.59,10.01,-0.75,0.1,2.66,1.02,0.01,">1 nonsynonymous","C31R T100M",2
"lib1","SARS-CoV-2","ACAAGCTGCCGCTGAA",3,1.66,NA,NA,NA,NA,NA,NA,"stop","N30* P54G K94M Y123N F167Q P197Y",6
"lib1","SARS-CoV-2","ACAAGCTGGATAAACA",5,90.32,10.78,0.02,0.06,2.91,1.03,0,"1 nonsynonymous","K132L",1
"lib1","SARS-CoV-2","ACAAGCTTAATTTCGT",2,17.99,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","C49F D59Y T85G S113G Y119T G172W",6
"lib1","SARS-CoV-2","ACAAGCTTTGGTATGG",3,46.18,10.46,-0.31,0.07,2.94,1.02,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","ACAAGGAAGTTAAATA",6,115.06,9.43,-1.33,0.05,2.76,1.09,0,">1 nonsynonymous","N24R N157D",2
"lib1","SARS-CoV-2","ACAAGGACAGCCAGCA",9,175.26,8.17,-2.6,0.12,1.67,1.14,0,">1 nonsynonymous","I2D K128V Y175K",3
"lib1","SARS-CoV-2","ACAAGGACCAAAATAA",6,148.47,10.22,-0.54,0.06,2.73,1.04,0,"1 nonsynonymous","V52S",1
"lib1","SARS-CoV-2","ACAAGGACTGACAAGC",3,28.48,9.17,-1.59,0.1,2.75,1.19,0.01,">1 nonsynonymous","S41F Y119P",2
"lib1","SARS-CoV-2","ACAAGGAGAAAAGAAA",1,19.79,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","N64P K87F W106Q Y143M",4
"lib1","SARS-CoV-2","ACAAGGAGAACCCAAT",7,5.25,NA,NA,NA,NA,NA,NA,"stop","G74K D97I P149*",3
"lib1","SARS-CoV-2","ACAAGGAGTAAACGAA",9,33.59,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D68G F134R",2
"lib1","SARS-CoV-2","ACAAGGATAATATGTT",1,10.65,9.84,-0.92,0.13,2.58,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGGATATAAAAGT",4,21.45,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14L T85I C158E T201V",4
"lib1","SARS-CoV-2","ACAAGGATGGTCATCG",2,42.07,9.72,-1.05,0.03,2.92,1.04,0,">1 nonsynonymous","S43T G166V",2
"lib1","SARS-CoV-2","ACAAGGATTATTAGCT",10,2.56,NA,NA,NA,NA,NA,NA,"stop","V32H N107K L111* G146W G155C",5
"lib1","SARS-CoV-2","ACAAGGATTCATTTTT",3,108.11,10.26,-0.51,0.08,2.29,1,0,">1 nonsynonymous","D97H W106Q F160K",3
"lib1","SARS-CoV-2","ACAAGGCAAGAAGAAT",1,25.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L D68K I88F",3
"lib1","SARS-CoV-2","ACAAGGCCATCAAGAC",2,185.26,10.65,-0.12,0.04,2.96,1.01,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","ACAAGGCCCAAGAAAA",8,160.67,7.51,-3.25,0.17,1.8,1.17,0.01,">1 nonsynonymous","N157R G174H",2
"lib1","SARS-CoV-2","ACAAGGCGGATAAATT",2,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22L F99S N110Y",3
"lib1","SARS-CoV-2","ACAAGGCTAGTTAATT",2,46.83,9.29,-1.48,0.12,1.85,1.07,0.01,">1 nonsynonymous","W106C F156V",2
"lib1","SARS-CoV-2","ACAAGGGATATGTCAG",1,43.75,10.82,0.06,0.05,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAAGGGATCAACCGC",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G F99T P169S",3
"lib1","SARS-CoV-2","ACAAGGGCACATTGAT",8,2,NA,NA,NA,NA,NA,NA,"stop","R25* E76T S129C",3
"lib1","SARS-CoV-2","ACAAGGGCCTCAGGCA",5,4.89,NA,NA,NA,NA,NA,NA,"stop","C6V A18R S53I D68Q S139* P149S L187H",7
"lib1","SARS-CoV-2","ACAAGGGGGAACACTT",4,20.48,6.42,-4.34,0.38,1.88,1.05,0.01,">1 nonsynonymous","G9M T15S S29Y Y93C F99Q A105M L122K",7
"lib1","SARS-CoV-2","ACAAGGGTAATCATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L S53* L60A",3
"lib1","SARS-CoV-2","ACAAGGGTGGCACTGT",8,88.28,6.51,-4.25,0.54,1.5,1.17,0.03,"1 nonsynonymous","F167N",1
"lib1","SARS-CoV-2","ACAAGGTACATAAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","N30* G74R F134G Y175I",4
"lib1","SARS-CoV-2","ACAAGGTAGTGCTTGA",6,60.74,10.21,-0.56,0.08,2.77,1.03,0,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","ACAAGGTCGATAACTG",8,136.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19R L38H G74K Q84H P96Q V181M T201E",7
"lib1","SARS-CoV-2","ACAAGGTCTGCACAAC",5,25.52,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","D68Q",1
"lib1","SARS-CoV-2","ACAAGGTCTGCAGACA",2,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V L95G V103F L183K",4
"lib1","SARS-CoV-2","ACAAGGTGAATTCCCT",1,15.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V115S D137S N171M P177V",4
"lib1","SARS-CoV-2","ACAAGGTTTAATGACT",3,0,NA,NA,NA,NA,NA,NA,"stop","E135Y G146* P161Y",3
"lib1","SARS-CoV-2","ACAAGTAAAAAAGAAT",1,58.59,10.62,-0.15,0.04,2.88,1.07,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","ACAAGTAAACAATGAA",6,71.73,10.28,-0.48,0.05,2.71,1.04,0,">1 nonsynonymous","D90R N107S Q168H",3
"lib1","SARS-CoV-2","ACAAGTAACAGAACCC",3,52.81,10.67,-0.1,0.05,2.94,1.02,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","ACAAGTAACGGGCTCT",3,13.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22R S69E Y93I Y143L",4
"lib1","SARS-CoV-2","ACAAGTAACTTGCTTA",2,3.52,NA,NA,NA,NA,NA,NA,"stop","N109M P133K E141N P149* Y175M",5
"lib1","SARS-CoV-2","ACAAGTACCGTTATAA",1,56.6,9.61,-1.16,0.06,2.84,1.07,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","ACAAGTAGACTTGCAA",2,39.44,10.53,-0.24,0.04,2.95,1,0,">1 nonsynonymous","Y35V A42S I138E",3
"lib1","SARS-CoV-2","ACAAGTAGGCAGGACC",1,13.98,10.33,-0.44,0.14,2.49,1.11,0.01,">1 nonsynonymous","N1R D98I",2
"lib1","SARS-CoV-2","ACAAGTAGTAGCCCTG",1,12.77,6.15,-4.61,0.43,1.79,1.23,0.01,">1 nonsynonymous","L5W F12R Y123W Q144R N151T P169Y",6
"lib1","SARS-CoV-2","ACAAGTATAAAGAACG",3,29.99,9.73,-1.03,0.16,1.93,1.1,0.01,">1 nonsynonymous","S19G G152R",2
"lib1","SARS-CoV-2","ACAAGTATAACTACAT",2,19.9,8.11,-2.66,0.16,2.25,1.03,0.01,"1 nonsynonymous","Y143K",1
"lib1","SARS-CoV-2","ACAAGTATAGTAAGGA",4,16.28,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G51W L57Y R127S P149M G155S S164A",6
"lib1","SARS-CoV-2","ACAAGTATATCCTGCG",1,8.14,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V11S W106L V173T",3
"lib1","SARS-CoV-2","ACAAGTATCAAAATTA",5,74.73,10.62,-0.15,0.05,2.86,1.07,0,"1 nonsynonymous","Y175F",1
"lib1","SARS-CoV-2","ACAAGTATGCTAGCGA",2,144.86,9.94,-0.83,0.06,2.61,1.03,0,">1 nonsynonymous","C6N T15I D59S",3
"lib1","SARS-CoV-2","ACAAGTATGGCGCTCA",2,12.35,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9P N118S I138E C150I T170D",5
"lib1","SARS-CoV-2","ACAAGTCAAATGGGAA",11,56.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y Y66L G83C",3
"lib1","SARS-CoV-2","ACAAGTCACACAATAT",2,22.28,8.22,-2.54,0.27,1.5,1.06,0.04,">1 nonsynonymous","A33L S43A N107M N120C",4
"lib1","SARS-CoV-2","ACAAGTCACGAGACTA",5,168.22,8.52,-2.24,0.1,2.95,1.07,0,">1 nonsynonymous","F126R F156A",2
"lib1","SARS-CoV-2","ACAAGTCATGAGATAA",1,31.36,6.89,-3.88,0.46,1.5,1.12,0.05,">1 nonsynonymous","R16F L38K Y121L K128C",4
"lib1","SARS-CoV-2","ACAAGTCCAACTTAAG",1,63.66,7.94,-2.83,0.25,1.72,1.14,0.02,">1 nonsynonymous","P7M N64D I142D",3
"lib1","SARS-CoV-2","ACAAGTCCACGCATAC",1,14.07,10.36,-0.41,0.16,2.84,1.01,0.01,">1 nonsynonymous","E10P T46I",2
"lib1","SARS-CoV-2","ACAAGTCCATTTTGAT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S F70W K87P T140K Y178H",5
"lib1","SARS-CoV-2","ACAAGTCCGCCTACAT",8,286.64,8.89,-1.87,0.12,1.73,1.12,0.01,">1 nonsynonymous","N120I I138N S147I Y178A",4
"lib1","SARS-CoV-2","ACAAGTCCTTAAAATG",1,8.79,10.41,-0.36,0.1,2.9,1.03,0.01,">1 nonsynonymous","K87I L187P",2
"lib1","SARS-CoV-2","ACAAGTCGATAGTCGC",7,99.89,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L F44P N64A I80R",4
"lib1","SARS-CoV-2","ACAAGTCGCAGGACCG",6,94.2,9.18,-1.58,0.06,2.89,1.1,0,">1 nonsynonymous","I2T C61D K114P",3
"lib1","SARS-CoV-2","ACAAGTCGCAGTCAGC",2,50.75,10.73,-0.03,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGTCGTCTGCCAT",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21R Y39T F62M Y91V N110L",5
"lib1","SARS-CoV-2","ACAAGTCTATCCCATA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6N W23E S41H S147*",4
"lib1","SARS-CoV-2","ACAAGTGATACACAGA",1,11.5,10.75,-0.02,0.05,2.95,1,0,"1 nonsynonymous","P7Q",1
"lib1","SARS-CoV-2","ACAAGTGCACTACTGT",4,24.22,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N13R V77T A89N K128Y N157T",5
"lib1","SARS-CoV-2","ACAAGTGCATAGACAT",6,60.93,10.78,0.02,0.1,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGTGCTGCTGAAA",8,120.54,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K56M K87M G172A Y178I",4
"lib1","SARS-CoV-2","ACAAGTGGTATTATGT",1,35.87,10.4,-0.37,0.07,2.86,1.04,0,">1 nonsynonymous","R16L V37I T140Y",3
"lib1","SARS-CoV-2","ACAAGTGTCACAGTAA",2,15.43,9.8,-0.97,0.08,2.79,1,0,">1 nonsynonymous","K56L G155V",2
"lib1","SARS-CoV-2","ACAAGTTAACTACTAA",5,59.01,10.78,0.02,0.05,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAAGTTACAATGGTG",4,55.23,7.62,-3.14,0.27,1.5,1.21,0.02,">1 nonsynonymous","N1Q Q84F A89G T140R T148S",5
"lib1","SARS-CoV-2","ACAAGTTAGTAACAAG",8,87.32,6,-4.76,2,3,1.23,0,">1 nonsynonymous","G51A S69R Y91K Q168G",4
"lib1","SARS-CoV-2","ACAAGTTATGATGACG",2,31.79,10.6,-0.16,0.12,2.83,1.09,0.01,">1 nonsynonymous","Y39N G51N",2
"lib1","SARS-CoV-2","ACAAGTTCAACCCACT",3,9.14,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8V T15D A42W K87I N107T V115E E141C",7
"lib1","SARS-CoV-2","ACAAGTTCCTCCTTGG",4,0.38,NA,NA,NA,NA,NA,NA,"stop","S41* T46S C61* A67V G101Y E154L",6
"lib1","SARS-CoV-2","ACAAGTTCTACGACAC",3,49.88,6.13,-4.63,0.67,1.5,1.17,0.02,">1 nonsynonymous","L38Q G83V D97N",3
"lib1","SARS-CoV-2","ACAAGTTCTATGCTCT",5,64.2,10.61,-0.16,0.03,2.96,1.02,0,">1 nonsynonymous","D97F V173D",2
"lib1","SARS-CoV-2","ACAAGTTGCTGGAATG",3,16.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S Q84T I104S",3
"lib1","SARS-CoV-2","ACAAGTTGGAATAACA",3,33.22,6,-4.76,1.26,3,1.18,0,">1 nonsynonymous","I2D P7V F99C Q168F",4
"lib1","SARS-CoV-2","ACAAGTTTAGTACGTC",2,56.12,10.06,-0.7,0.08,2.52,1.04,0,">1 nonsynonymous","F44V G83A",2
"lib1","SARS-CoV-2","ACAAGTTTTAGATCAT",2,7.53,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","A14L A81T P96F G174L",4
"lib1","SARS-CoV-2","ACAATAAAACAGCATT",3,54.39,10.79,0.02,0.1,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAATAAAAGTTGGAG",6,92.36,8.14,-2.62,0.14,2.23,1.1,0.01,"1 nonsynonymous","Y175K",1
"lib1","SARS-CoV-2","ACAATAAAATGAATTG",24,1190.68,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","Y175D Y178K",2
"lib1","SARS-CoV-2","ACAATAAAATTACAGT",3,6.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42S A89L L131V Q168W",4
"lib1","SARS-CoV-2","ACAATAAACACTGTAT",9,125.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61R Y143N G174I T201A",4
"lib1","SARS-CoV-2","ACAATAAACCCACGGA",5,109.22,7.66,-3.11,0.23,1.5,1.13,0.01,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","ACAATAAATCACCCTT",7,68.02,8.82,-1.95,0.23,1.5,1.04,0.03,">1 nonsynonymous","V103A K114I V173K",3
"lib1","SARS-CoV-2","ACAATAAATGAAAAGT",4,19.76,6,-4.76,2,3,1.09,0,">1 nonsynonymous","D34Y T63F W106E K198R",4
"lib1","SARS-CoV-2","ACAATAAATTAGAAAG",5,34.26,9.1,-1.67,0.2,1.56,1.18,0.01,"1 nonsynonymous","W23R",1
"lib1","SARS-CoV-2","ACAATAACACACGTGC",1,0.27,NA,NA,NA,NA,NA,NA,"stop","C49P D59G P82* N92M",4
"lib1","SARS-CoV-2","ACAATAACAGCAATAC",3,12.87,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V103Y Y121R S129L",3
"lib1","SARS-CoV-2","ACAATAACGATGCTGA",1,5.35,NA,NA,NA,NA,NA,NA,"stop","D90W L122* N157I",3
"lib1","SARS-CoV-2","ACAATAACGCTGAACC",10,145.97,9.72,-1.04,0.09,2.34,1.08,0,">1 nonsynonymous","Y91M E135S",2
"lib1","SARS-CoV-2","ACAATAACTTCAAAAG",10,73.47,8.8,-1.96,0.28,1.5,1,0.03,">1 nonsynonymous","R25T A89V",2
"lib1","SARS-CoV-2","ACAATAAGAAATCATC",8,91.62,10.41,-0.36,0.06,2.77,1,0,">1 nonsynonymous","L57D Q168W T201N",3
"lib1","SARS-CoV-2","ACAATAAGAAGAAGGA",2,55.19,10.83,0.07,0.08,2.88,1.08,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","ACAATAAGAATTAGTT",5,1.18,NA,NA,NA,NA,NA,NA,"stop","A22* D34Y Y91N C158K",4
"lib1","SARS-CoV-2","ACAATAAGACTACCAT",4,130.57,9.32,-1.44,0.07,2.81,1.14,0,">1 nonsynonymous","K114F T170R",2
"lib1","SARS-CoV-2","ACAATAAGATTAAAAT",5,41.85,10.79,0.02,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATAAGGATTGTAA",6,2.53,NA,NA,NA,NA,NA,NA,"stop","L5G V37* L95E L122S",4
"lib1","SARS-CoV-2","ACAATAAGGCATGAAC",1,6.22,6.7,-4.07,0.44,2.12,1.08,0.03,">1 nonsynonymous","S108Y V173F",2
"lib1","SARS-CoV-2","ACAATAATAATTCACC",2,133.99,8.19,-2.57,0.14,2.26,1.12,0.01,">1 nonsynonymous","S113L Y175F",2
"lib1","SARS-CoV-2","ACAATAATACTGGCGG",2,23.03,9.01,-1.76,0.16,1.82,1.12,0.01,">1 nonsynonymous","N13K R27D K48I G116M",4
"lib1","SARS-CoV-2","ACAATAATAGAATACA",4,48.99,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","F62S T85F Y123G",3
"lib1","SARS-CoV-2","ACAATAATAGGTAAAT",2,5.87,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","C6D D34A G86C D98P G155P Y178L",6
"lib1","SARS-CoV-2","ACAATAATATAAACTT",6,150.73,9.88,-0.88,0.1,2.31,1.09,0,">1 nonsynonymous","L60H D98G G152L",3
"lib1","SARS-CoV-2","ACAATAATATAAATAC",2,6.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C150S R179L",2
"lib1","SARS-CoV-2","ACAATAATCAATTCAA",3,63.64,10.17,-0.59,0.05,2.98,1,0,"1 nonsynonymous","N118D",1
"lib1","SARS-CoV-2","ACAATAATGCGATGTT",2,33.87,6,-4.76,1.46,1.5,1.16,0.02,">1 nonsynonymous","C6N F12V P96T",3
"lib1","SARS-CoV-2","ACAATAATGTGAAACC",5,20.7,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","N1P S29W V103T I138S T170N V180E",6
"lib1","SARS-CoV-2","ACAATAATTCGGTTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","L5* F12D F99G K114A Y121T",5
"lib1","SARS-CoV-2","ACAATACAACACTGCT",4,42.38,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W23L G86L Y119L F156P",4
"lib1","SARS-CoV-2","ACAATACAACTAAAAT",2,11.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F G51S D90L Y121A S147P",5
"lib1","SARS-CoV-2","ACAATACAATTGCAAA",2,5.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N40S P54D P161Y",3
"lib1","SARS-CoV-2","ACAATACACCCAGGTA",6,129.39,10.79,0.03,0.07,2.89,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATACATCTCACAA",6,1.29,NA,NA,NA,NA,NA,NA,"stop","E10S R16* A22T F62T K87D Y91I F126V C158P",8
"lib1","SARS-CoV-2","ACAATACATGGAATCT",2,55.78,10.73,-0.04,0.04,2.95,1.02,0,">1 nonsynonymous","L60Y A89T",2
"lib1","SARS-CoV-2","ACAATACCAAAGATAG",5,68.03,10.74,-0.03,0.05,2.91,1.06,0,">1 nonsynonymous","V32E S41N G116A",3
"lib1","SARS-CoV-2","ACAATACCAGTTGAGA",4,34.69,6,-4.76,1.96,1.5,1.17,0.01,">1 nonsynonymous","K56T G117C G155I",3
"lib1","SARS-CoV-2","ACAATACCCGATAGTG",6,22.38,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","A14T G146L",2
"lib1","SARS-CoV-2","ACAATACCCTTCTATT",3,2.03,NA,NA,NA,NA,NA,NA,"stop","L60M V71* G86T W106G F156L",5
"lib1","SARS-CoV-2","ACAATACCGCCCACGC",1,13.36,10.61,-0.15,0.05,2.83,1.09,0,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","ACAATACGGACAATCA",13,59.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I2G Y35R G86E D98G",4
"lib1","SARS-CoV-2","ACAATACGTACTAGCT",8,35.07,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A22M C49A T85M G101D",4
"lib1","SARS-CoV-2","ACAATACTCAGACATA",2,14.3,10.21,-0.55,0.04,2.91,1,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","ACAATACTCATTCGCA",2,31.23,10.4,-0.36,0.1,2.72,1.09,0,">1 nonsynonymous","K56E T63D Q84K",3
"lib1","SARS-CoV-2","ACAATACTCTTGAATT",15,96.59,6,-4.76,1.55,1.5,1.21,0.01,">1 nonsynonymous","S69R L95E G172R",3
"lib1","SARS-CoV-2","ACAATACTGCAAATGG",4,0.32,NA,NA,NA,NA,NA,NA,"stop","T3P S19P L60C K87T G117* N151L",6
"lib1","SARS-CoV-2","ACAATACTTCCGAACT",5,1.68,NA,NA,NA,NA,NA,NA,"stop","G74T G86* F99*",3
"lib1","SARS-CoV-2","ACAATACTTGACAGTA",1,9.65,6,-4.76,1.48,3,1.25,0.01,">1 nonsynonymous","G51F F134T",2
"lib1","SARS-CoV-2","ACAATAGAAAAAAGAC",2,64.31,9.87,-0.9,0.12,2.16,1.03,0.01,"1 nonsynonymous","S19R",1
"lib1","SARS-CoV-2","ACAATAGAAATGCATG",6,22.18,6,-4.76,2,1.5,1.3,0.01,">1 nonsynonymous","P82K F126K C158R S164L G174S",5
"lib1","SARS-CoV-2","ACAATAGAACCATATG",6,146.62,10.57,-0.19,0.03,2.91,1.01,0,">1 nonsynonymous","N4Y K56T L95I Y123K",4
"lib1","SARS-CoV-2","ACAATAGAACGCCCTG",4,36.11,10.15,-0.61,0.06,2.91,1,0,">1 nonsynonymous","N13S K87T Q168R",3
"lib1","SARS-CoV-2","ACAATAGACTATTGTT",1,24.53,10.11,-0.65,0.12,2.74,1.01,0.01,">1 nonsynonymous","T3K V52L N58I Q84A D90T",5
"lib1","SARS-CoV-2","ACAATAGATCCTAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2N S113* N120I",3
"lib1","SARS-CoV-2","ACAATAGCACTTTAGG",2,21.4,6,-4.76,2,1.5,1.39,0.05,">1 nonsynonymous","A14T R25K V37L D68R I138W",5
"lib1","SARS-CoV-2","ACAATAGCCCTATCAA",5,118.69,10.72,-0.04,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATAGCGCTTTCCA",2,47.09,10.74,-0.02,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATAGCTTTAGCGA",7,32.32,9.17,-1.59,0.29,1.5,1.04,0.03,">1 nonsynonymous","G9R A105N H189R",3
"lib1","SARS-CoV-2","ACAATAGGCCTTCTTG",5,1.35,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","ACAATAGGGGTGCACA",3,23.54,6.3,-4.46,0.49,1.5,1.05,0.02,">1 nonsynonymous","C61L P82M T100Q Q176G",4
"lib1","SARS-CoV-2","ACAATAGGTAATAATT",4,65.8,9.06,-1.7,0.08,2.8,1.09,0,">1 nonsynonymous","G51K G117T S129H",3
"lib1","SARS-CoV-2","ACAATAGTACCAGTAT",2,12.53,6.53,-4.24,0.53,2.91,1.06,0.03,">1 nonsynonymous","T85E D90P D98G",3
"lib1","SARS-CoV-2","ACAATAGTCGGAATAC",3,38.15,6,-4.76,2,3,1.23,0,">1 nonsynonymous","L60R G86T V103S",3
"lib1","SARS-CoV-2","ACAATATAAAAGAGAG",3,8.21,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V11D P96R G155D",3
"lib1","SARS-CoV-2","ACAATATAACATATCA",10,40.37,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3I D97N V103G E141V E154L V173S",6
"lib1","SARS-CoV-2","ACAATATAACTAGAAA",3,41.68,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","T15A N64V N107K I142F G155Y",5
"lib1","SARS-CoV-2","ACAATATACTACAAAA",1,23.82,10.57,-0.19,0.03,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAATATAGAAAACCC",5,59.67,6,-4.76,1.17,1.57,1.2,0.01,"1 nonsynonymous","R124D",1
"lib1","SARS-CoV-2","ACAATATATATAAAAG",1,6.67,9.65,-1.12,0.21,2.22,1,0.02,">1 nonsynonymous","F8T K128P",2
"lib1","SARS-CoV-2","ACAATATATCGGGCAT",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K K87R G101T C150M L162V",5
"lib1","SARS-CoV-2","ACAATATCAAAATTAA",1,15.31,7.79,-2.97,0.25,1.5,1.11,0.02,">1 nonsynonymous","A14F A33H S41K P133S",4
"lib1","SARS-CoV-2","ACAATATCAAAGAACC",6,57.23,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","D68V G86L T100G L122G",4
"lib1","SARS-CoV-2","ACAATATCAAGAGAAA",1,37.35,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","L95D",1
"lib1","SARS-CoV-2","ACAATATCGCAGACAG",17,87.18,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F17V Y91N G172K",3
"lib1","SARS-CoV-2","ACAATATCTAAACCAT",8,0.08,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","ACAATATGACAACTGT",2,82.91,10.79,0.02,0.04,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATATGATCACCAC",3,27.29,6.27,-4.49,0.75,1.5,1.14,0.04,">1 nonsynonymous","S19Q S36P V37A V71L K87N P96T Y119H",7
"lib1","SARS-CoV-2","ACAATATGTCAACCAG",4,81.26,10.81,0.05,0.06,2.88,1.08,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","ACAATATGTGACTCTC",3,24.4,7.7,-3.06,0.29,1.5,1.06,0.02,">1 nonsynonymous","P96Q Y119L",2
"lib1","SARS-CoV-2","ACAATATTATTAAGAT",4,37.09,6,-4.76,0.49,3,1.1,0,">1 nonsynonymous","E135Y G172Y",2
"lib1","SARS-CoV-2","ACAATATTCGATCTAT",1,25.26,9.55,-1.21,0.13,1.87,1.17,0.01,">1 nonsynonymous","A42R K87T A105Q T148I",4
"lib1","SARS-CoV-2","ACAATCAAAAACGAAT",4,1.5,NA,NA,NA,NA,NA,NA,"stop","N107* D112E",2
"lib1","SARS-CoV-2","ACAATCAAACGTGATA",4,106.55,9.1,-1.66,0.07,2.73,1.13,0,">1 nonsynonymous","Y143S S147N",2
"lib1","SARS-CoV-2","ACAATCAAATCAAGAA",2,31.3,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Y21S L60Y K87D T100M R127K",5
"lib1","SARS-CoV-2","ACAATCAATCTACCAC",12,120.23,6.32,-4.44,0.51,1.5,1.15,0.02,">1 nonsynonymous","F17S D59P G166V",3
"lib1","SARS-CoV-2","ACAATCAATGCAACGG",3,103.43,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N92E Y175K",2
"lib1","SARS-CoV-2","ACAATCAATTCTAGCG",9,1.27,NA,NA,NA,NA,NA,NA,"stop","E10* I138F",2
"lib1","SARS-CoV-2","ACAATCACAGGCTTTG",9,41.78,10.65,-0.11,0.04,2.98,1.02,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","ACAATCACCTGGCGAA",3,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S T15S V20R F44A",4
"lib1","SARS-CoV-2","ACAATCAGAGCTAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","ACAATCAGAGGAACTC",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C P177S",2
"lib1","SARS-CoV-2","ACAATCAGGAATCTCA",11,224.27,10.53,-0.24,0.04,2.89,1.05,0,">1 nonsynonymous","N4L T201I",2
"lib1","SARS-CoV-2","ACAATCAGTTAGTGGA",1,16.11,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V11S G83V",2
"lib1","SARS-CoV-2","ACAATCATCCGTATAC",1,37.93,9.67,-1.09,0.14,2.41,1.16,0.01,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","ACAATCATTTCAAGGC",4,20.61,7.78,-2.98,0.45,1.5,1,0.08,">1 nonsynonymous","Y21L N107L N118K S139V",4
"lib1","SARS-CoV-2","ACAATCATTTGACGAT",3,34,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N64H K94C R179S",3
"lib1","SARS-CoV-2","ACAATCCACTGTCTAA",4,29.84,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L60K D90V R136S",3
"lib1","SARS-CoV-2","ACAATCCAGTTTGAAC",6,128.48,10.75,-0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATCCCAGGCGTTT",1,8.65,10.57,-0.19,0.17,2.86,1.14,0.02,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","ACAATCCCTAAAAATA",3,89.43,10.74,-0.03,0.06,2.9,1.07,0,"1 nonsynonymous","P197C",1
"lib1","SARS-CoV-2","ACAATCCCTACGTCTA",1,14.66,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F8S A14Y D90K Y119P N157C",5
"lib1","SARS-CoV-2","ACAATCCGACTCCCAC",4,53.41,10.71,-0.05,0.05,2.76,1.03,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","ACAATCCTAAATTATA",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A Q84D D97I",3
"lib1","SARS-CoV-2","ACAATCCTATCCTAGG",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L I104N G152M F156V L162P L187P",6
"lib1","SARS-CoV-2","ACAATCCTGCTCGGCG",1,48.85,10.24,-0.53,0.06,2.84,1,0,">1 nonsynonymous","I104T K114I",2
"lib1","SARS-CoV-2","ACAATCGACACACTAT",2,59.89,6.08,-4.68,0.96,1.5,1.19,0.02,">1 nonsynonymous","Y35E Y93I R136P K199I",4
"lib1","SARS-CoV-2","ACAATCTAACTATAAT",1,34.42,10.7,-0.07,0.07,2.76,1.1,0,"1 nonsynonymous","K26E",1
"lib1","SARS-CoV-2","ACAATCTATAACCATA",3,51.99,10.72,-0.04,0.03,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATCTGAAATTTAC",2,94.73,10.35,-0.42,0.04,2.8,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATCTGATAACAGG",3,2.46,NA,NA,NA,NA,NA,NA,"stop","C6M W23E S45C F134* Q168R",5
"lib1","SARS-CoV-2","ACAATCTGTAAAAAAA",3,21.5,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L A18E L125N D137F",4
"lib1","SARS-CoV-2","ACAATCTTAAAGGGAA",4,6.49,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L60R A81S P161I",3
"lib1","SARS-CoV-2","ACAATCTTATAACTTA",1,11.56,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49S D90Q",2
"lib1","SARS-CoV-2","ACAATCTTGGGACTGC",14,99.44,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11T I80K C102A I142N",4
"lib1","SARS-CoV-2","ACAATCTTTTGATTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","V115* P169N",2
"lib1","SARS-CoV-2","ACAATGAAAAGGTTTC",6,7.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1H A33M R136E",3
"lib1","SARS-CoV-2","ACAATGAAAATGTAAT",2,1.73,NA,NA,NA,NA,NA,NA,"stop","A42S T148*",2
"lib1","SARS-CoV-2","ACAATGAAACCTTGAA",10,165.96,7.35,-3.42,0.16,1.79,1.19,0.01,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ACAATGAACCACTTAA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","A14L D68R I88V D97* C158L",5
"lib1","SARS-CoV-2","ACAATGAATAAGGGAA",2,66.74,9.76,-1.01,0.08,2.07,1.1,0,">1 nonsynonymous","L38P T201K",2
"lib1","SARS-CoV-2","ACAATGAATTTGAAAG",7,59.66,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F8N W23R K87M Y143L",4
"lib1","SARS-CoV-2","ACAATGACAAGCTGTT",9,209.94,9.15,-1.62,0.09,2.5,1.13,0,">1 nonsynonymous","A42T Q176L",2
"lib1","SARS-CoV-2","ACAATGACGCAGATAC",2,47.85,8.78,-1.98,0.16,2.25,1.06,0.01,">1 nonsynonymous","A14R I142R G196E",3
"lib1","SARS-CoV-2","ACAATGACGTACCATA",6,7.38,6.45,-4.31,0.62,1.5,1.01,0.04,">1 nonsynonymous","Y21E K87L F99V F134V V173L",5
"lib1","SARS-CoV-2","ACAATGACGTTGACAC",1,42.91,10.93,0.16,0.09,2.93,1.03,0,"1 nonsynonymous","S184H",1
"lib1","SARS-CoV-2","ACAATGAGCACTTAAT",4,67.51,8.81,-1.95,0.1,2.23,1.11,0,">1 nonsynonymous","N58I R73T S129T V173A",4
"lib1","SARS-CoV-2","ACAATGAGTCAGCACA",2,23.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R R16T V37K Y66T A89R N157S",6
"lib1","SARS-CoV-2","ACAATGCACCATAGAT",1,12.93,10.71,-0.05,0.06,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATGCATGAACCTA",8,111.71,7.73,-3.04,0.12,2.18,1.12,0,">1 nonsynonymous","D90C F126E",2
"lib1","SARS-CoV-2","ACAATGCATTACAATG",2,30.37,8.69,-2.08,0.11,1.99,1.12,0.01,">1 nonsynonymous","N110K Y119R R124K",3
"lib1","SARS-CoV-2","ACAATGCCCACTAACC",7,46.39,7.22,-3.54,0.34,1.5,1.21,0.03,">1 nonsynonymous","A42T L57F Q79R T85A T201E",5
"lib1","SARS-CoV-2","ACAATGCGAAAATCGT",2,29.45,6.64,-4.12,0.17,2.3,1.12,0,">1 nonsynonymous","A89S F156C R179G G196W",4
"lib1","SARS-CoV-2","ACAATGCGAACCGAAA",3,70.87,7.3,-3.47,0.3,1.5,1.14,0.03,">1 nonsynonymous","C6L K87T N107T",3
"lib1","SARS-CoV-2","ACAATGCGAATAAAAA",7,87.44,10.6,-0.16,0.05,2.91,1.08,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","ACAATGCTAAACCTAA",6,186.32,7.89,-2.88,0.2,1.56,1.14,0.01,">1 nonsynonymous","D59S G146L N151S",3
"lib1","SARS-CoV-2","ACAATGCTGGGGTGAG",6,130.24,10.44,-0.33,0.04,2.84,1.06,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","ACAATGGAAACATAAA",16,17.88,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","Y50C L95A V153L V182T",4
"lib1","SARS-CoV-2","ACAATGGATTACAATT",4,38.46,6.25,-4.51,0.9,1.5,1.25,0.03,">1 nonsynonymous","A89I S113R",2
"lib1","SARS-CoV-2","ACAATGGCACAAAGTA",1,47.12,10.19,-0.58,0.11,2.58,1,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","ACAATGGCACTATCTA",3,30.86,10.88,0.12,0.09,2.9,1.05,0,">1 nonsynonymous","T85H V173L",2
"lib1","SARS-CoV-2","ACAATGGGATATACCA",3,8.79,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2T G9R Y35R F62R R127T",5
"lib1","SARS-CoV-2","ACAATGGGATCGCTGA",5,39.27,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N24A G86F V103R L122Y H189C",5
"lib1","SARS-CoV-2","ACAATGGGGGTCTCAA",1,16.14,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","E10A F17I Y39S T63L N92V G155N",6
"lib1","SARS-CoV-2","ACAATGGGTCTGTAAA",9,124.01,10.65,-0.12,0.04,2.9,1.04,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","ACAATGGTAGCGGGTA",2,46.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R16C K26M D90E F167R T201D",5
"lib1","SARS-CoV-2","ACAATGGTATAGCAGG",6,100.72,10.73,-0.04,0.04,2.93,1.05,0,">1 nonsynonymous","V37M R78S V115I",3
"lib1","SARS-CoV-2","ACAATGGTCAAGAGCA",3,9.1,6.27,-4.49,0.27,2.02,1.06,0,">1 nonsynonymous","W106N G152L L183W",3
"lib1","SARS-CoV-2","ACAATGTAAACTTTGA",4,0,NA,NA,NA,NA,NA,NA,"stop","L5N S69* I88P T100K K198H",5
"lib1","SARS-CoV-2","ACAATGTACCTACCTG",8,121.31,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","C49S L60E K87C",3
"lib1","SARS-CoV-2","ACAATGTATACCCAGT",2,17.1,6,-4.76,2,1.5,1.19,0.03,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","ACAATGTCAAAACAGC",2,44.62,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86L G117R",2
"lib1","SARS-CoV-2","ACAATGTCTCTTGCCT",11,1.68,NA,NA,NA,NA,NA,NA,"stop","G9H V103M D112* P149T",4
"lib1","SARS-CoV-2","ACAATGTGACGCCATA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","Q84* F156A",2
"lib1","SARS-CoV-2","ACAATGTGAGTTATGA",1,5.94,NA,NA,NA,NA,NA,NA,"stop","G101* N120M C158S G166L Q176L",5
"lib1","SARS-CoV-2","ACAATGTGGAGCATTA",4,77.12,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S41G P54C P177F A192E",4
"lib1","SARS-CoV-2","ACAATGTGTATTGTTT",2,65.76,10.27,-0.49,0.08,2.59,1.03,0,">1 nonsynonymous","N24G N120Q I138H S164Q",4
"lib1","SARS-CoV-2","ACAATGTTAATACAAT",6,253.26,9.08,-1.69,0.1,1.5,1.11,0,">1 nonsynonymous","I28S F134L",2
"lib1","SARS-CoV-2","ACAATGTTAATCCGTA",6,59.51,6,-4.76,1.26,1.5,1.27,0.03,">1 nonsynonymous","A14R N92I",2
"lib1","SARS-CoV-2","ACAATGTTATGCTCAG",2,113.57,10.82,0.05,0.11,2.78,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAATTAAAGACTGGG",3,84.75,10.75,-0.02,0.06,2.84,1.04,0,"1 nonsynonymous","K199H",1
"lib1","SARS-CoV-2","ACAATTAAAGGCCTAG",4,45.33,10.03,-0.73,0.05,2.83,1.05,0,">1 nonsynonymous","K56T T100L G152I A190K",4
"lib1","SARS-CoV-2","ACAATTAACACACCAC",6,49.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N1F F12L I72R S113H P149R",5
"lib1","SARS-CoV-2","ACAATTAACGATACGC",3,23.88,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D68E D98T G174R",3
"lib1","SARS-CoV-2","ACAATTACGAAAGGCT",1,49.71,9.26,-1.5,0.08,2.78,1.13,0,">1 nonsynonymous","Y119V E154V",2
"lib1","SARS-CoV-2","ACAATTACTATAATAA",10,1.53,NA,NA,NA,NA,NA,NA,"stop","Y91G F126L R127*",3
"lib1","SARS-CoV-2","ACAATTACTTGCGGAT",10,74.29,8.85,-1.92,0.07,2.75,1.07,0,">1 nonsynonymous","D90H Q168I",2
"lib1","SARS-CoV-2","ACAATTAGAAAGAGAC",1,21.13,9.85,-0.91,0.08,2.92,1.05,0,">1 nonsynonymous","T100W E154V",2
"lib1","SARS-CoV-2","ACAATTAGAAGCAAGC",7,153.37,10.7,-0.06,0.03,2.91,1.04,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","ACAATTAGCAAGGAGG",1,162.76,9.91,-0.85,0.08,2.6,1.05,0,">1 nonsynonymous","T100K N107K",2
"lib1","SARS-CoV-2","ACAATTAGCAGACCTT",8,209.57,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A89M I138C P177E S184M",4
"lib1","SARS-CoV-2","ACAATTAGTTCAGTAA",5,93.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y39G N130C G146T Y178V C195Q",5
"lib1","SARS-CoV-2","ACAATTATAAATTAAA",4,36.68,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S19V S147F N157H G166W",4
"lib1","SARS-CoV-2","ACAATTATAGTAAATA",2,19.37,10.81,0.05,0.09,2.93,1.02,0,">1 nonsynonymous","G9N F44Y",2
"lib1","SARS-CoV-2","ACAATTATATTCCGGT",5,37.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14F D90F G101N",3
"lib1","SARS-CoV-2","ACAATTATCAAGCATG",1,11.19,10.33,-0.44,0.12,2.93,1.13,0.01,">1 nonsynonymous","K87P K198D",2
"lib1","SARS-CoV-2","ACAATTATGACATAAA",2,11.66,9.68,-1.08,0.26,2.04,1.19,0.02,">1 nonsynonymous","L5A K56Y T63P G152T",4
"lib1","SARS-CoV-2","ACAATTATGGATATCT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","N13G I72R P96*",3
"lib1","SARS-CoV-2","ACAATTATTACAGAGT",4,65.19,7.95,-2.81,0.12,1.8,1.08,0.01,">1 nonsynonymous","L60Y N118S F134A T170L",4
"lib1","SARS-CoV-2","ACAATTCAAATTTAGT",4,28.55,6.23,-4.54,0.89,1.5,1.21,0.03,">1 nonsynonymous","A81G N120L P161Q",3
"lib1","SARS-CoV-2","ACAATTCAACTACAAC",1,8.91,10.2,-0.56,0.43,2.39,1.09,0.07,">1 nonsynonymous","L5M N64I",2
"lib1","SARS-CoV-2","ACAATTCAGGTTTTCC",8,48.37,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F70H L95E",2
"lib1","SARS-CoV-2","ACAATTCAGTACGATA",2,25.46,7.82,-2.94,0.42,1.5,1,0.07,">1 nonsynonymous","T100E K114C N157R",3
"lib1","SARS-CoV-2","ACAATTCATACTACCT",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q T201D",2
"lib1","SARS-CoV-2","ACAATTCATAGTAGAA",1,43.57,10.69,-0.07,0.09,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAATTCATCCATGAT",1,13.77,10.5,-0.26,0.08,2.94,1.02,0,">1 nonsynonymous","G9R V52L T201C",3
"lib1","SARS-CoV-2","ACAATTCATTAATCCA",3,26.47,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N120F N157Y T170K",3
"lib1","SARS-CoV-2","ACAATTCATTTTACAA",1,15.77,NA,NA,NA,NA,NA,NA,"stop","E10* P169Y",2
"lib1","SARS-CoV-2","ACAATTCCACATTAAT",3,8.88,10.03,-0.73,0.24,2.21,1.04,0.02,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","ACAATTCGAATCTTTA",21,248.91,7.39,-3.37,0.14,1.5,1.14,0.01,">1 nonsynonymous","E10Q Q144S G155A G166F",4
"lib1","SARS-CoV-2","ACAATTCGGTTTTCAC",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R R124P D137E",3
"lib1","SARS-CoV-2","ACAATTCTAAAGCTCC",6,137.39,10.83,0.06,0.07,2.92,1.05,0,">1 nonsynonymous","N1S V173I",2
"lib1","SARS-CoV-2","ACAATTCTGCCCGGGT",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53T I88W",2
"lib1","SARS-CoV-2","ACAATTGAAAAACTTA",1,16.47,10.83,0.07,0.12,2.96,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACAATTGAATAGACTT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F V20A T85G C150P",4
"lib1","SARS-CoV-2","ACAATTGAGAAAACTA",2,40.84,10.37,-0.4,0.04,2.94,1.02,0,">1 nonsynonymous","I138L P169N",2
"lib1","SARS-CoV-2","ACAATTGAGACCGAAT",3,134.46,10.67,-0.09,0.06,2.91,1,0,">1 nonsynonymous","E10S A190T",2
"lib1","SARS-CoV-2","ACAATTGATAACAAGC",4,22.08,8.24,-2.53,0.15,2.05,1.08,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","ACAATTGCAAAGAGTA",5,49.07,6.35,-4.42,0.41,1.5,1.11,0.01,">1 nonsynonymous","L60R Q84P R127S C150L",4
"lib1","SARS-CoV-2","ACAATTGCCAACTCAA",4,2.98,NA,NA,NA,NA,NA,NA,"stop","A89C D97* L111V R136Y Q176H",5
"lib1","SARS-CoV-2","ACAATTGCTATTTATA",10,2.71,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib1","SARS-CoV-2","ACAATTGGACGGGTAT",2,37.79,10.14,-0.63,0.07,2.86,1.03,0,">1 nonsynonymous","G9R N24R E76M",3
"lib1","SARS-CoV-2","ACAATTGGACTAAAAT",1,26.01,9.75,-1.01,0.08,2.29,1,0,">1 nonsynonymous","A81Y K114A",2
"lib1","SARS-CoV-2","ACAATTGGGATTTAAC",2,41.32,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I28Y Q168S P177R",3
"lib1","SARS-CoV-2","ACAATTGTATACATCA",1,38.5,9.98,-0.79,0.04,2.78,1,0,">1 nonsynonymous","T63D K128I G174P",3
"lib1","SARS-CoV-2","ACAATTGTATCCGGCA",2,9.07,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","W106M N107K D112Q S200Y",4
"lib1","SARS-CoV-2","ACAATTGTCGACTTAC",12,187.6,10.51,-0.25,0.05,2.82,1.08,0,">1 nonsynonymous","T55C T148S",2
"lib1","SARS-CoV-2","ACAATTTAATGTTTTA",3,41.45,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G86T I104K S113L L122V",4
"lib1","SARS-CoV-2","ACAATTTAGTATGGGC",2,59.87,10.6,-0.16,0.07,2.86,1.11,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","ACAATTTAGTCTACTA",10,108.08,8.58,-2.19,0.15,2.1,1.13,0.01,">1 nonsynonymous","N64S N107I",2
"lib1","SARS-CoV-2","ACAATTTATAGATAAT",6,0,NA,NA,NA,NA,NA,NA,"stop","A18T C61* G83C Q163M",4
"lib1","SARS-CoV-2","ACAATTTATCACGACA",6,48.6,7.43,-3.33,0.34,1.5,1.06,0.04,">1 nonsynonymous","A42V K94T S200R",3
"lib1","SARS-CoV-2","ACAATTTATCCTATTC",11,189.24,8.8,-1.97,0.12,1.82,1.14,0.01,">1 nonsynonymous","T63I Y121T",2
"lib1","SARS-CoV-2","ACAATTTCAAACAATT",5,165.4,10.49,-0.27,0.02,2.92,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","ACAATTTCATAGCTGT",5,25.28,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N24E F62I A81L G86M D97I K132V E154H",7
"lib1","SARS-CoV-2","ACAATTTCGAACACCT",1,1.09,NA,NA,NA,NA,NA,NA,"stop","C61L A89* D98I Q176A",4
"lib1","SARS-CoV-2","ACAATTTGAGGATAGG",6,53.22,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","W23M S45L P149L",3
"lib1","SARS-CoV-2","ACAATTTGCACAATAG",2,83.93,10.55,-0.22,0.05,2.89,1.02,0,">1 nonsynonymous","V32T K48C T148S",3
"lib1","SARS-CoV-2","ACAATTTGCGTCTTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F44V T85V N120* F134P V173L",5
"lib1","SARS-CoV-2","ACAATTTTAGACGTTG",2,17.73,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F8S N40Y G155I",3
"lib1","SARS-CoV-2","ACAATTTTCGATTAAC",1,26.29,9.77,-1,0.06,2.87,1.06,0,">1 nonsynonymous","I138S F156S T193Y V194G",4
"lib1","SARS-CoV-2","ACACAAAAAACGCAGC",1,2.66,NA,NA,NA,NA,NA,NA,"stop","R27* G86F L131G",3
"lib1","SARS-CoV-2","ACACAAAAAATTCCAA",5,15.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89H D112I",2
"lib1","SARS-CoV-2","ACACAAAAAGAAAAGT",2,19.02,9.7,-1.06,0.06,2.16,1,0,"1 nonsynonymous","L38N",1
"lib1","SARS-CoV-2","ACACAAAAAGACGAGA",2,11.72,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","N4L F44R G101D",3
"lib1","SARS-CoV-2","ACACAAAACAGATGAA",2,15.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25G V37S F62N K94R G166M",5
"lib1","SARS-CoV-2","ACACAAAAGAAATAAA",6,119.98,10.29,-0.48,0.06,2.88,1,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","ACACAAAATATCCACA",4,361.9,10.21,-0.56,0.04,2.68,1.03,0,">1 nonsynonymous","K94H R136H V173K",3
"lib1","SARS-CoV-2","ACACAAAATTGCCAAA",6,49.2,9.84,-0.92,0.05,2.95,1.02,0,"1 nonsynonymous","N109T",1
"lib1","SARS-CoV-2","ACACAAACAAATTTTC",5,146.79,9.76,-1.01,0.05,2.79,1.05,0,">1 nonsynonymous","P54L C61S K87S N130W C195S",5
"lib1","SARS-CoV-2","ACACAAACCGAAGGTT",1,22.04,6,-4.76,1.27,1.5,1.22,0.02,">1 nonsynonymous","N4R K48R G86F",3
"lib1","SARS-CoV-2","ACACAAACCTCGTCAC",1,20.88,9.08,-1.68,0.28,1.5,1,0.04,">1 nonsynonymous","F12N D59N",2
"lib1","SARS-CoV-2","ACACAAACTAGTTTGG",9,136.3,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23L V37H K128N P161R",4
"lib1","SARS-CoV-2","ACACAAACTCCCGATA",1,116.65,10.72,-0.05,0.05,2.92,1.05,0,"1 nonsynonymous","A192S",1
"lib1","SARS-CoV-2","ACACAAACTGATATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","R16* I28K T63K R127* K132I V173F",6
"lib1","SARS-CoV-2","ACACAAAGAGGCTAAA",4,27.54,6,-4.76,1.41,1.5,1.18,0.01,">1 nonsynonymous","G9N V103L Q144H",3
"lib1","SARS-CoV-2","ACACAAAGGATAGAGA",12,188.08,10.64,-0.12,0.05,2.91,1.06,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","ACACAAAGTAATGAAT",4,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V R124W",2
"lib1","SARS-CoV-2","ACACAAATAAATAATG",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L Q84L C150D",3
"lib1","SARS-CoV-2","ACACAAATATAACGTC",5,102.01,6.18,-4.59,0.83,1.5,1.19,0.03,">1 nonsynonymous","W106S R124E Q163P",3
"lib1","SARS-CoV-2","ACACAAATATACAGGA",3,20.78,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y143T V181S K199S",3
"lib1","SARS-CoV-2","ACACAAATCAGTCTGC",2,19.6,6,-4.76,0.58,3,1.13,0,">1 nonsynonymous","F44H Y50S K56A G86V S129M G146M",6
"lib1","SARS-CoV-2","ACACAAATGACAAACA",2,84.25,8.36,-2.4,0.1,2.69,1.1,0,">1 nonsynonymous","D59G N157L",2
"lib1","SARS-CoV-2","ACACAAATGTGATGAT",3,67.72,10.46,-0.31,0.05,2.91,1.05,0,"1 nonsynonymous","K56F",1
"lib1","SARS-CoV-2","ACACAAATTAAACAAC",5,1.91,NA,NA,NA,NA,NA,NA,"stop","S45* V65Q Q84S F160S",4
"lib1","SARS-CoV-2","ACACAAATTACTATGT",2,16.85,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V103L S139F Y175T P191T",4
"lib1","SARS-CoV-2","ACACAAATTCGTATAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I K87R I104N P197S",4
"lib1","SARS-CoV-2","ACACAACAACAATATG",5,24.49,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","A33C Y39L Y91L N107F N120W R127L L183Q",7
"lib1","SARS-CoV-2","ACACAACAACCAAACA",2,34.45,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F8L T85C A105K K114H",4
"lib1","SARS-CoV-2","ACACAACACCTCGGTT",3,37.77,6.61,-4.15,0.45,1.5,1.28,0.04,">1 nonsynonymous","S36R A89L",2
"lib1","SARS-CoV-2","ACACAACATCCTGAAT",5,9.16,6.54,-4.23,2,1.5,1.31,0.03,">1 nonsynonymous","R78Y D90Y A105P L188H",4
"lib1","SARS-CoV-2","ACACAACATCTGTTAT",2,43.16,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","R27P P54L P82R F99A",4
"lib1","SARS-CoV-2","ACACAACCAGCCGCCC",9,94.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37S V71S N92F P149G G172M",5
"lib1","SARS-CoV-2","ACACAACCGGTCCCTG",4,3.4,NA,NA,NA,NA,NA,NA,"stop","V11R N40W K48* L122E",4
"lib1","SARS-CoV-2","ACACAACCGTCCATCG",4,94.53,10.51,-0.25,0.03,2.94,1,0,">1 nonsynonymous","S36V I142T",2
"lib1","SARS-CoV-2","ACACAACCTGGTAGAA",1,10.97,9.3,-1.47,0.31,1.73,1.13,0.05,">1 nonsynonymous","A42G D59A F99I T201R",4
"lib1","SARS-CoV-2","ACACAACGCAATGATT",8,115.53,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","L5F R16L F70L N107Q",4
"lib1","SARS-CoV-2","ACACAACGCACTGTGC",5,62.59,10.76,0,0.06,2.86,1.03,0,">1 nonsynonymous","R16S P169S",2
"lib1","SARS-CoV-2","ACACAACGCCGATGAC",2,139.86,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","K26E V103K F134T Q144C Y178N",5
"lib1","SARS-CoV-2","ACACAACTAAGGTTGA",2,251.28,10.02,-0.74,0.06,2.86,1.01,0,"1 nonsynonymous","P177A",1
"lib1","SARS-CoV-2","ACACAACTTACTGAGA",10,166.13,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","N30L L60S G83T Y91T S113L",5
"lib1","SARS-CoV-2","ACACAACTTTAGGATC",3,23.28,9.8,-0.96,0.19,1.82,1.16,0.01,">1 nonsynonymous","I2S I80C",2
"lib1","SARS-CoV-2","ACACAAGAAGATTACA",3,24.44,6,-4.76,2,1.5,1.24,0.04,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","ACACAAGATTACACCA",1,25.4,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","T55S N107R N171K P177R",4
"lib1","SARS-CoV-2","ACACAAGCAATAAAAA",9,145.94,10.86,0.09,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACAAGCAATTCCCG",6,58.09,6,-4.76,0.62,2.26,1.11,0,">1 nonsynonymous","Y119K Y159S",2
"lib1","SARS-CoV-2","ACACAAGCACCAGCGA",1,27.24,6.42,-4.34,0.48,1.5,1.12,0.02,">1 nonsynonymous","C61G F99C",2
"lib1","SARS-CoV-2","ACACAAGCGCCATGCT",8,38.88,10.09,-0.68,0.09,2.5,1.07,0,">1 nonsynonymous","S29K S45A P54S L57E",4
"lib1","SARS-CoV-2","ACACAAGGAAATAGTC",5,28.78,9.89,-0.87,0.17,2.53,1,0.01,">1 nonsynonymous","C6N Y39F S129F",3
"lib1","SARS-CoV-2","ACACAAGGAGGCAAAC",5,58.59,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","A89T N92W",2
"lib1","SARS-CoV-2","ACACAAGGGTCTACTA",2,28.5,8.41,-2.35,0.17,1.5,1.1,0.02,">1 nonsynonymous","G86Y V173Q",2
"lib1","SARS-CoV-2","ACACAAGTAAGACGTA",1,38.48,10.4,-0.37,0.09,2.84,1.04,0,"1 nonsynonymous","V71L",1
"lib1","SARS-CoV-2","ACACAAGTTAACTCGT",2,114.88,8.64,-2.13,0.09,2.84,1.07,0,">1 nonsynonymous","G9W N157T",2
"lib1","SARS-CoV-2","ACACAATAAAGTTACT",7,159.29,10.37,-0.39,0.03,2.87,1.04,0,">1 nonsynonymous","K48V F62S",2
"lib1","SARS-CoV-2","ACACAATAACTTGTCA",4,31.52,10.49,-0.27,0.07,2.97,1.01,0,">1 nonsynonymous","T100Q G116R",2
"lib1","SARS-CoV-2","ACACAATAATATAATA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","R127H F134* Y165R",3
"lib1","SARS-CoV-2","ACACAATAGTTGATGA",8,111.58,9.97,-0.79,0.07,2.58,1.01,0,">1 nonsynonymous","W106R K128N V153S",3
"lib1","SARS-CoV-2","ACACAATCCCCAGCGG",1,7.78,10.99,0.23,0.09,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACAATCGATAAATA",6,11.5,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","C102S E154Y P197S",3
"lib1","SARS-CoV-2","ACACAATGACAGGACT",2,74.74,9.83,-0.94,0.12,2.04,1.05,0.01,"1 nonsynonymous","A14W",1
"lib1","SARS-CoV-2","ACACAATGCACTTATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L N107V F156T",3
"lib1","SARS-CoV-2","ACACAATGTAATCGCG",5,1.19,NA,NA,NA,NA,NA,NA,"stop","A105M D137P F160*",3
"lib1","SARS-CoV-2","ACACAATGTATGTCTA",9,38.75,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N13Q A42T N107C R179L",4
"lib1","SARS-CoV-2","ACACAATTAAAATTCT",3,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R K94Y N171F",3
"lib1","SARS-CoV-2","ACACAATTAACACCAT",7,73.18,9.2,-1.57,0.18,1.77,1.13,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","ACACAATTAATCATAG",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R F62P",2
"lib1","SARS-CoV-2","ACACAATTACATTAAC",6,18.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4D V11G K94V",3
"lib1","SARS-CoV-2","ACACAATTACCAGGTT",1,6.41,10.56,-0.2,0.13,2.87,1.04,0.01,">1 nonsynonymous","T3D K56N E186D",3
"lib1","SARS-CoV-2","ACACAATTAGGTCCCG",1,12.13,10.12,-0.64,0.1,2.98,1,0.01,">1 nonsynonymous","T140P F156R",2
"lib1","SARS-CoV-2","ACACAATTCGTCCCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N T15I A33V S164L Y175F L183W T201D",7
"lib1","SARS-CoV-2","ACACAATTTAGCTTAC",8,35.87,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G101F S113Y",2
"lib1","SARS-CoV-2","ACACAATTTCAAGCAA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","F8* N64L P177G",3
"lib1","SARS-CoV-2","ACACACAACAATCAGA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib1","SARS-CoV-2","ACACACAAGGCAGAAC",5,116.05,9.22,-1.55,0.15,1.54,1.19,0.01,">1 nonsynonymous","Y35N P133E T148R",3
"lib1","SARS-CoV-2","ACACACAAGTCTTGTA",2,49.61,10.74,-0.03,0.05,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACACAATCACATGG",11,100.22,10.23,-0.53,0.08,2.67,1.01,0,">1 nonsynonymous","N58M D98F",2
"lib1","SARS-CoV-2","ACACACACCAACACGC",3,295.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S69K K87E D112V N120T",4
"lib1","SARS-CoV-2","ACACACACGAGATAGA",1,38.33,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","V20T Y35E P96V",3
"lib1","SARS-CoV-2","ACACACACGTTTTAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I88H I142* S147D S200I",4
"lib1","SARS-CoV-2","ACACACACTAAAAATG",11,57.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6E C49Y Q84C F99G N120C",5
"lib1","SARS-CoV-2","ACACACACTTTTATTT",6,141.36,10.75,-0.01,0.05,2.87,1.08,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","ACACACAGACACAACA",5,27.88,9.79,-0.97,0.16,1.73,1.02,0.01,">1 nonsynonymous","T3S Y66G",2
"lib1","SARS-CoV-2","ACACACAGATGTGCAA",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E N40Y C61P A89K D112M",5
"lib1","SARS-CoV-2","ACACACAGTTTATCTT",3,35.94,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G101L Y143N",2
"lib1","SARS-CoV-2","ACACACATAACAAAAA",3,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7W G116K",2
"lib1","SARS-CoV-2","ACACACATATCTCCAA",2,33.41,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","C6L K48V W106S S139H N171V",5
"lib1","SARS-CoV-2","ACACACATTACCCCGA",3,1.96,NA,NA,NA,NA,NA,NA,"stop","S41T D68* D90M P96S",4
"lib1","SARS-CoV-2","ACACACCAAACATAAT",4,41.41,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","P82T S113W P161I",3
"lib1","SARS-CoV-2","ACACACCCCAATATCA",4,97.42,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","W23M R124C E141I",3
"lib1","SARS-CoV-2","ACACACCCCATAGAAT",3,57.54,10.78,0.02,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACACCCGAGTTATA",4,16.81,7.21,-3.56,0.4,1.5,1.1,0.06,">1 nonsynonymous","G86L P96E",2
"lib1","SARS-CoV-2","ACACACCGAACCCTGA",7,71.43,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6V G86D V103Y G116L",4
"lib1","SARS-CoV-2","ACACACCGATAAAGAA",2,43.94,10.6,-0.17,0.05,2.99,1,0,">1 nonsynonymous","E141F T201C",2
"lib1","SARS-CoV-2","ACACACCGCCACTCTT",6,61.48,6,-4.76,2,2,1.22,0,">1 nonsynonymous","A18R T63L D90N V103C L131S A145E G155W",7
"lib1","SARS-CoV-2","ACACACCTACAACCAA",4,78.14,6.99,-3.77,0.15,1.73,1.14,0,">1 nonsynonymous","A14S K128S Y143G",3
"lib1","SARS-CoV-2","ACACACCTCATCATCA",2,53.27,9.59,-1.18,0.08,2.73,1.08,0,">1 nonsynonymous","L5P Q176K",2
"lib1","SARS-CoV-2","ACACACGACAATTTTC",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73I V153R Y178R",3
"lib1","SARS-CoV-2","ACACACGATATCATCC",2,44.41,10.17,-0.6,0.07,2.93,1,0,">1 nonsynonymous","R73T T85H T148V",3
"lib1","SARS-CoV-2","ACACACGATATGTCTA",5,84.6,10.15,-0.62,0.05,2.78,1,0,">1 nonsynonymous","A14L K198P",2
"lib1","SARS-CoV-2","ACACACGCGGTCTCAA",6,21.29,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","G83I Y121S R179M",3
"lib1","SARS-CoV-2","ACACACGCGGTTGTTG",1,22.75,8.88,-1.89,0.18,1.94,1.12,0.02,">1 nonsynonymous","R27C N157C",2
"lib1","SARS-CoV-2","ACACACGGAACCGAAA",2,69.53,10.73,-0.04,0.05,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACACGGGTGGGTTG",1,15.56,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V11S A89D L95T Q163S",4
"lib1","SARS-CoV-2","ACACACGGTCCCCCGG",4,49.42,10.59,-0.18,0.05,2.93,1.02,0,">1 nonsynonymous","N1H G9R",2
"lib1","SARS-CoV-2","ACACACGTCGCTCATG",2,65.19,10.04,-0.72,0.15,2.11,1,0.01,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","ACACACTAACATGACC",4,34.23,10.02,-0.75,0.19,2.31,1.07,0.01,">1 nonsynonymous","C102L G146S",2
"lib1","SARS-CoV-2","ACACACTAATAGCATA",8,93.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q E76N Y123R",3
"lib1","SARS-CoV-2","ACACACTAATATAGGC",7,60.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D97S V103K F156K",3
"lib1","SARS-CoV-2","ACACACTAATCGCCAA",1,17.41,9.81,-0.95,0.12,2.78,1.08,0,">1 nonsynonymous","C6Y A42R N64D E154R",4
"lib1","SARS-CoV-2","ACACACTATACTTGTT",1,23.77,10.38,-0.39,0.08,2.94,1.01,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","ACACACTATCTAAATC",8,308.02,8.15,-2.62,0.2,1.76,1.11,0.02,">1 nonsynonymous","P54A C61I Q176V",3
"lib1","SARS-CoV-2","ACACACTTGTAAATAA",3,17.19,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","E10Y G86H T100P N107A L162V",5
"lib1","SARS-CoV-2","ACACAGAAAAACGTCC",1,43.13,10.2,-0.56,0.07,2.73,1.06,0,">1 nonsynonymous","V37M G83V",2
"lib1","SARS-CoV-2","ACACAGAAGTATACCG",8,154.01,10.12,-0.64,0.04,2.84,1.01,0,">1 nonsynonymous","Y35M F44L L122D",3
"lib1","SARS-CoV-2","ACACAGACAGGAGGTG",13,95.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K26W C49E L57M A81D F126L",5
"lib1","SARS-CoV-2","ACACAGAGGAGACACT",2,10.66,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A42T L60P V71S D98W G116C",5
"lib1","SARS-CoV-2","ACACAGATAATAAATA",2,13.54,8.88,-1.89,0.12,2.68,1.1,0.01,">1 nonsynonymous","N107E G116E",2
"lib1","SARS-CoV-2","ACACAGATATACAAGA",3,80.14,6.38,-4.38,0.29,1.54,1.11,0.01,">1 nonsynonymous","G83I G116V D137L",3
"lib1","SARS-CoV-2","ACACAGATCTAGGCTT",2,75.69,10.69,-0.07,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACAGATGGAATACC",4,86.69,10.78,0.01,0.07,2.88,1.08,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","ACACAGCACAATAAAA",1,19.05,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","A67T P82S P149G",3
"lib1","SARS-CoV-2","ACACAGCACTTACAAA",2,14.95,10.72,-0.05,0.07,2.91,1.03,0,">1 nonsynonymous","S184M S200L",2
"lib1","SARS-CoV-2","ACACAGCCCCTAATGG",1,24.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94H Y121L P161S T170S",4
"lib1","SARS-CoV-2","ACACAGCCTAACGCAT",1,22.45,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I2R F17S Y50G F62R L125V",5
"lib1","SARS-CoV-2","ACACAGCGACATCGCG",9,64.82,6,-4.76,1.11,1.5,1.17,0.01,">1 nonsynonymous","G83V Y123N G146Y",3
"lib1","SARS-CoV-2","ACACAGCGGTTGCAGC",4,175.64,8.33,-2.43,0.14,2.31,1.1,0.01,">1 nonsynonymous","N64R Y119S A145L",3
"lib1","SARS-CoV-2","ACACAGCTAAACTGAA",2,75.7,8.49,-2.28,0.08,2.64,1.12,0,">1 nonsynonymous","F44H G117L",2
"lib1","SARS-CoV-2","ACACAGGGTAAGACGG",5,14.55,6,-4.76,1.8,1.5,1.21,0.03,">1 nonsynonymous","T15H S41W Y93N",3
"lib1","SARS-CoV-2","ACACAGGTCACTGGTC",4,1.22,NA,NA,NA,NA,NA,NA,"stop","C6S G86*",2
"lib1","SARS-CoV-2","ACACAGGTTAACTAAT",1,20.5,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I2F Y35W P54I N64R G101M T170Q P177S P197R",8
"lib1","SARS-CoV-2","ACACAGTACGCATCAA",5,55.01,10.77,0,0.06,3,1.01,0,"1 nonsynonymous","T140M",1
"lib1","SARS-CoV-2","ACACAGTAGCGACCGC",12,210.12,10.6,-0.17,0.04,2.87,1.04,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","ACACAGTATAGCACAA",7,38.84,7.64,-3.13,0.44,1.5,1.18,0.05,">1 nonsynonymous","V77A Q84K G174W T201S",4
"lib1","SARS-CoV-2","ACACAGTATGAGCTCC",4,0.59,NA,NA,NA,NA,NA,NA,"stop","W23* V71P G174H",3
"lib1","SARS-CoV-2","ACACAGTCGATAAAAT",2,28.34,10.65,-0.12,0.08,2.78,1.14,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","ACACAGTGTTACAACA",9,7.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59T S184G P197S",3
"lib1","SARS-CoV-2","ACACATAAAAGTAGTG",1,6.75,NA,NA,NA,NA,NA,NA,"stop","L57* Y121T",2
"lib1","SARS-CoV-2","ACACATAATTCATCAT",2,60.8,10.19,-0.57,0.05,2.91,1.01,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","ACACATACGCGATTTA",1,82.29,10.45,-0.32,0.05,2.88,1.05,0,"1 nonsynonymous","S45R",1
"lib1","SARS-CoV-2","ACACATAGAAGACAAT",1,19.71,8.97,-1.8,0.1,2.36,1.17,0.01,">1 nonsynonymous","E154Q T170R Y178T",3
"lib1","SARS-CoV-2","ACACATAGACCCTGAA",2,6.77,8.97,-1.79,0.31,1.63,1.06,0.04,">1 nonsynonymous","N64D Y91L S108V",3
"lib1","SARS-CoV-2","ACACATAGATATAGAT",8,102.07,9.54,-1.22,0.12,2.49,1.11,0.01,">1 nonsynonymous","V37C S43L G83K E141L E154L T201I",6
"lib1","SARS-CoV-2","ACACATATCATCTAAA",2,0.77,NA,NA,NA,NA,NA,NA,"stop","E10* V20R S69H Y119*",4
"lib1","SARS-CoV-2","ACACATATCATGTATG",7,90.25,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N107G F167S",2
"lib1","SARS-CoV-2","ACACATATGAATTAGA",10,90.93,6.64,-4.12,0.27,1.5,1.15,0.01,">1 nonsynonymous","F44T E76G K132I",3
"lib1","SARS-CoV-2","ACACATCAGTTCTAAA",5,26.33,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","S45Y C61L Y93C",3
"lib1","SARS-CoV-2","ACACATCATTCTGTAA",2,93.11,10.7,-0.07,0.07,2.88,1.09,0,">1 nonsynonymous","T85R F99W",2
"lib1","SARS-CoV-2","ACACATCCCTGTTGCG",5,33.35,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51S E141T S184P",3
"lib1","SARS-CoV-2","ACACATCGAAATCATT",1,11.96,6,-4.76,2,1.5,1.13,0.06,">1 nonsynonymous","G51T D90R Y119S K132G I142D",5
"lib1","SARS-CoV-2","ACACATCGTAGCTAAC",2,15.18,6.7,-4.06,0.75,1.5,1.26,0.06,">1 nonsynonymous","N13C A33T K114S Y121P",4
"lib1","SARS-CoV-2","ACACATCTCACATTGG",3,105.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62Y F126N G166D G172R",4
"lib1","SARS-CoV-2","ACACATCTGAGCACCC",3,8.11,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","T63P G86M P96L",3
"lib1","SARS-CoV-2","ACACATCTGGTTTTAA",2,21.58,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44L T85D L162K V180Y",4
"lib1","SARS-CoV-2","ACACATCTTCTCTGCT",12,477.05,10.81,0.04,0.06,2.9,1.06,0,"1 nonsynonymous","R16K",1
"lib1","SARS-CoV-2","ACACATCTTGGCGAAA",3,10.74,10.26,-0.5,0.18,2.7,1.22,0.01,">1 nonsynonymous","A42G F134T",2
"lib1","SARS-CoV-2","ACACATGACACCCGTA",1,10.8,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","V65F K87G G116Q K132R Y159R Q176F",6
"lib1","SARS-CoV-2","ACACATGAGAACCTGG",6,60.34,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A14H D98T S139P",3
"lib1","SARS-CoV-2","ACACATGCCACATAGG",4,105.44,10.11,-0.66,0.08,2.49,1,0,">1 nonsynonymous","L38W K128L",2
"lib1","SARS-CoV-2","ACACATGCCCTACGCA",6,0.05,NA,NA,NA,NA,NA,NA,"stop","N1S C61W G86* G101F K114T G155L",6
"lib1","SARS-CoV-2","ACACATGCTATGCAGA",2,58.98,9.34,-1.43,0.12,1.67,1.14,0.01,">1 nonsynonymous","I2D S36N C102F K114F",4
"lib1","SARS-CoV-2","ACACATGCTGAATCGG",3,85.53,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","G172T",1
"lib1","SARS-CoV-2","ACACATGGCATTGAGC",1,0.25,NA,NA,NA,NA,NA,NA,"stop","C6* E76R P177T",3
"lib1","SARS-CoV-2","ACACATGGGTCAATGT",2,41.93,10.74,-0.02,0.05,3,1,0,">1 nonsynonymous","T3P F160D",2
"lib1","SARS-CoV-2","ACACATGGTGTTACGT",5,31.33,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","K48I V65R P96V V103F",4
"lib1","SARS-CoV-2","ACACATGTCTTTAGAC",6,12.19,6.65,-4.11,0.56,1.5,1.4,0.07,">1 nonsynonymous","Y143S P177I L183K",3
"lib1","SARS-CoV-2","ACACATTAAACACCAA",8,50.18,8.62,-2.14,0.12,2.4,1.07,0.01,">1 nonsynonymous","E154Y P161S",2
"lib1","SARS-CoV-2","ACACATTAACCGAGTT",9,199.48,10.67,-0.1,0.04,2.91,1.04,0,">1 nonsynonymous","A33T P197L",2
"lib1","SARS-CoV-2","ACACATTAATAAAAAT",2,13.63,9.38,-1.38,0.25,1.73,1.05,0.03,">1 nonsynonymous","N13K L60R Y178A",3
"lib1","SARS-CoV-2","ACACATTACAGATTAG",1,34.64,9.07,-1.7,0.07,2.91,1.07,0,">1 nonsynonymous","Y119A N151I",2
"lib1","SARS-CoV-2","ACACATTATCTTAACC",5,0.85,NA,NA,NA,NA,NA,NA,"stop","N4G N13* T55R L60S L162*",5
"lib1","SARS-CoV-2","ACACATTCAAATTTTA",7,99,6,-4.76,0.95,1.5,1.13,0,">1 nonsynonymous","D97F C158V G166K",3
"lib1","SARS-CoV-2","ACACATTCAGGTAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","ACACATTCAGTCCCAT",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39M L60S P82V G155L",4
"lib1","SARS-CoV-2","ACACATTCCGATACCC",3,25.53,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","K94L Y143S",2
"lib1","SARS-CoV-2","ACACATTTGACATATA",2,75.31,10.43,-0.33,0.07,2.95,1.05,0,">1 nonsynonymous","I138T G155S",2
"lib1","SARS-CoV-2","ACACATTTTAGAGTCT",5,38.83,10.66,-0.11,0.12,2.77,1.18,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACACCAAAAAAACCGC",2,30.97,7.98,-2.79,0.2,2.03,1.06,0.02,">1 nonsynonymous","K56D A67T A145R G166V",4
"lib1","SARS-CoV-2","ACACCAAAAATAGTAA",6,157.25,9.49,-1.27,0.08,2.65,1.07,0,">1 nonsynonymous","A22S D59C Y119R",3
"lib1","SARS-CoV-2","ACACCAAAACTTGTAA",11,190.23,10.71,-0.05,0.07,2.91,1.05,0,"1 nonsynonymous","N58P",1
"lib1","SARS-CoV-2","ACACCAAAATAATTGA",2,84.64,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","R136I G152P G172M",3
"lib1","SARS-CoV-2","ACACCAAAGAAATTCT",2,19.21,7.81,-2.95,0.45,1.5,1.08,0.07,">1 nonsynonymous","N58L W106A V173Y",3
"lib1","SARS-CoV-2","ACACCAAAGGCAATGA",1,6.46,10.91,0.15,0.12,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ACACCAACGAAACCTC",4,1.58,NA,NA,NA,NA,NA,NA,"stop","L131D I142*",2
"lib1","SARS-CoV-2","ACACCAACTGAAGCTA",2,57.59,9.91,-0.86,0.14,2.23,1.04,0.01,">1 nonsynonymous","Y35K V103I T201K",3
"lib1","SARS-CoV-2","ACACCAAGAGCTATAT",6,35.95,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","G9M I28C W106R Y121T P133L Y159D",6
"lib1","SARS-CoV-2","ACACCAAGATGATATT",2,24.46,6,-4.76,1.97,1.5,1.15,0.02,">1 nonsynonymous","I88R P161L",2
"lib1","SARS-CoV-2","ACACCAATAAAAAATA",3,53.55,10.77,0,0.07,2.91,1.08,0,"1 nonsynonymous","F62A",1
"lib1","SARS-CoV-2","ACACCAATAAAGCAGG",2,26.93,6,-4.76,2,3,1.26,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","ACACCAATAGCTGAGT",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V E76K V115P",3
"lib1","SARS-CoV-2","ACACCAATTATGGGCT",2,7.7,10.69,-0.07,0.08,2.9,1.02,0,"1 nonsynonymous","F160G",1
"lib1","SARS-CoV-2","ACACCACAACAGATAA",10,44.56,7.46,-3.3,0.45,1.5,1.2,0.06,">1 nonsynonymous","F99R A105L",2
"lib1","SARS-CoV-2","ACACCACAGTAATAGG",2,9.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96F K128N Y159V",3
"lib1","SARS-CoV-2","ACACCACATAGTAAAG",3,9.96,10.16,-0.6,0.28,1.69,1.08,0.02,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","ACACCACCATGATACC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P G74T L95E W106Q",4
"lib1","SARS-CoV-2","ACACCACCCTAGTCAC",7,165.87,8.71,-2.06,0.07,2.3,1.08,0,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","ACACCACGACACGATG",1,41.72,10.7,-0.06,0.07,2.94,1.05,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","ACACCACGAGTGACCA",8,54.23,8.96,-1.81,0.18,1.5,1.09,0.02,">1 nonsynonymous","S45W Y123L E154L",3
"lib1","SARS-CoV-2","ACACCACGCTGAGTTC",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R N13M A22I D98S Q168W",5
"lib1","SARS-CoV-2","ACACCACTAGTGTAAT",4,3.17,NA,NA,NA,NA,NA,NA,"stop","Y50* G83K K87W N118L F156*",5
"lib1","SARS-CoV-2","ACACCACTGTGAACGG",2,56.38,10.64,-0.12,0.08,2.87,1.06,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","ACACCAGATGGCTGTA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","T46H D112S G116S Y121* Q144V F167L",6
"lib1","SARS-CoV-2","ACACCAGCTAGAATAA",4,18.67,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V11D N58C I104C R127Q A190V",5
"lib1","SARS-CoV-2","ACACCAGCTCCAATCA",1,5.36,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y21R N64Q",2
"lib1","SARS-CoV-2","ACACCAGGGAAATGAT",1,9.27,10.15,-0.62,0.16,2.55,1,0.02,">1 nonsynonymous","N58H N64K N107P",3
"lib1","SARS-CoV-2","ACACCAGGGCCAGGAC",3,104.74,8.18,-2.58,0.11,1.64,1.11,0,">1 nonsynonymous","G152V Y178A S184G",3
"lib1","SARS-CoV-2","ACACCAGTACATATGC",3,35.85,10.58,-0.18,0.04,2.99,1,0,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","ACACCAGTACGATACA",5,44.88,9.33,-1.43,0.11,1.8,1.26,0.01,">1 nonsynonymous","L5T N13S F17I",3
"lib1","SARS-CoV-2","ACACCAGTTATTTATT",1,13.88,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V103S P149S",2
"lib1","SARS-CoV-2","ACACCATAATACCAAA",1,12.14,10.1,-0.66,0.2,2.56,1.41,0.02,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","ACACCATACAATAAGG",5,11.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R S36K G86C F99V Q168C P177T S200I",7
"lib1","SARS-CoV-2","ACACCATATACGATCA",7,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V L122S T201I",3
"lib1","SARS-CoV-2","ACACCATATACGCCAG",4,13.37,10.87,0.1,0.13,2.93,1,0.01,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","ACACCATATCATATAT",3,34.63,10.56,-0.2,0.04,2.94,1.02,0,">1 nonsynonymous","T15S C61I",2
"lib1","SARS-CoV-2","ACACCATGCACGTAAT",7,100.13,10.8,0.04,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACCATTTAACCAAT",2,42.18,10.72,-0.04,0.06,2.88,1.04,0,">1 nonsynonymous","I72V E141F",2
"lib1","SARS-CoV-2","ACACCATTTACGCTAA",1,14.74,6,-4.76,2,3,1.08,0,">1 nonsynonymous","L5K E10M N24L S53Y T148C G174Q",6
"lib1","SARS-CoV-2","ACACCCAACTAAGGAA",5,67.93,9.97,-0.8,0.12,2.34,1.09,0.01,">1 nonsynonymous","S36R D59V I104W",3
"lib1","SARS-CoV-2","ACACCCAAGAATCATA",2,136.83,8.62,-2.15,0.08,2.74,1.08,0,">1 nonsynonymous","T55G Y143S",2
"lib1","SARS-CoV-2","ACACCCAAGGACAAAT",2,29.76,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G172V S200G",2
"lib1","SARS-CoV-2","ACACCCAATATGATCT",4,31.24,9.89,-0.87,0.2,2.74,1.06,0.02,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","ACACCCAATTCACCAA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","G101F G146*",2
"lib1","SARS-CoV-2","ACACCCACGCCAAGAT",10,65.53,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y50V Q144M Y178L",3
"lib1","SARS-CoV-2","ACACCCACGCGCATAC",3,65.23,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","Y39H I88G R136H",3
"lib1","SARS-CoV-2","ACACCCACGTAATTAA",1,0.29,NA,NA,NA,NA,NA,NA,"stop","K87D N120E E135*",3
"lib1","SARS-CoV-2","ACACCCACGTGGGATG",1,25.21,8.19,-2.57,0.34,1.5,1.02,0.05,">1 nonsynonymous","A81S T100S W106M",3
"lib1","SARS-CoV-2","ACACCCACTACATATA",3,44.82,9.9,-0.87,0.14,2.24,1.09,0.01,">1 nonsynonymous","T100M V181L",2
"lib1","SARS-CoV-2","ACACCCAGCCGATATG",4,43.68,10.7,-0.06,0.07,2.91,1.05,0,"1 nonsynonymous","T55K",1
"lib1","SARS-CoV-2","ACACCCAGGAATTTCT",2,33.54,6.07,-4.7,1.37,1.5,1.26,0.06,">1 nonsynonymous","K132S C150M F156I T170R",4
"lib1","SARS-CoV-2","ACACCCATATGATGAA",1,15.14,10.73,-0.04,0.08,2.94,1.01,0,"1 nonsynonymous","V115S",1
"lib1","SARS-CoV-2","ACACCCCAAAACAGTC",7,155.61,9.55,-1.22,0.05,2.76,1.07,0,">1 nonsynonymous","F44N N109L",2
"lib1","SARS-CoV-2","ACACCCCAACAAAACT",5,3.1,NA,NA,NA,NA,NA,NA,"stop","W106S C150* Y178K",3
"lib1","SARS-CoV-2","ACACCCCGCTCGAGAG",7,32.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V20M C61S Y91H",3
"lib1","SARS-CoV-2","ACACCCCGCTGCGCAT",2,22.38,10.73,-0.04,0.07,2.88,1.08,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","ACACCCCGGGCGAGAT",11,0.79,NA,NA,NA,NA,NA,NA,"stop","C6* C61Q P82R F99K L125Y F156L",6
"lib1","SARS-CoV-2","ACACCCCTAATCCTTG",3,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W T100G N109E V173I",4
"lib1","SARS-CoV-2","ACACCCGAAAACAATC",1,28.1,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V52I C150R Q168S V173P",4
"lib1","SARS-CoV-2","ACACCCGACGAAGGAG",5,110.74,10.73,-0.03,0.08,2.84,1.06,0,">1 nonsynonymous","Y35I C61W",2
"lib1","SARS-CoV-2","ACACCCGCACAAACGC",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55R P96S",2
"lib1","SARS-CoV-2","ACACCCGCACCCTTAC",3,61.91,6.56,-4.21,0.62,1.5,1.27,0.03,">1 nonsynonymous","I2L G9R L38V N107S Y178S",5
"lib1","SARS-CoV-2","ACACCCGTAAACTGAC",2,7.74,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T46W C102M A105S G152S",4
"lib1","SARS-CoV-2","ACACCCTAACAATCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V R73W V103C N118L H189V",5
"lib1","SARS-CoV-2","ACACCCTCACATCTAG",7,129.97,10.71,-0.05,0.06,2.87,1.08,0,">1 nonsynonymous","L5F I104W N130T",3
"lib1","SARS-CoV-2","ACACCCTCATAAATAA",4,56.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9H R16G W23K R73A N120H",5
"lib1","SARS-CoV-2","ACACCCTCATCTGCCT",1,15.69,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F8D G86R",2
"lib1","SARS-CoV-2","ACACCCTGAATTCAGA",3,50.07,9.88,-0.88,0.07,2.74,1.07,0,">1 nonsynonymous","C31P G152S F160S",3
"lib1","SARS-CoV-2","ACACCCTGCCGGCTTA",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W I88T K199Y",3
"lib1","SARS-CoV-2","ACACCCTGCCGTGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Q79S S139G S147* G172L",4
"lib1","SARS-CoV-2","ACACCCTGGGCCAGAA",6,173.75,9.87,-0.89,0.12,2.08,1.05,0,">1 nonsynonymous","D59K P96R",2
"lib1","SARS-CoV-2","ACACCCTTAGCGGGGT",2,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L D90N K114P",3
"lib1","SARS-CoV-2","ACACCGAACGGGTTCT",2,24.3,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","L95Y",1
"lib1","SARS-CoV-2","ACACCGAAGGAAATTG",1,56.96,9.85,-0.92,0.15,1.9,1.08,0.01,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","ACACCGAATAAAAACG",3,30.04,10.64,-0.13,0.08,2.91,1.09,0,">1 nonsynonymous","I104L N171Q",2
"lib1","SARS-CoV-2","ACACCGAATTAGCATG",5,44.82,10.09,-0.68,0.11,2.56,1.08,0,">1 nonsynonymous","N40E Y165F",2
"lib1","SARS-CoV-2","ACACCGACAGGCACCA",1,31.89,9.58,-1.18,0.15,2.7,1.09,0.01,"1 nonsynonymous","G174I",1
"lib1","SARS-CoV-2","ACACCGAGTCAAGTAC",5,0.61,NA,NA,NA,NA,NA,NA,"stop","K87* L95H",2
"lib1","SARS-CoV-2","ACACCGATAGAACGTT",6,121.07,10.7,-0.07,0.04,2.89,1.04,0,">1 nonsynonymous","L5R K56R P149L",3
"lib1","SARS-CoV-2","ACACCGATTATCCGCG",3,79.83,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27V K56C A89E N151Y",4
"lib1","SARS-CoV-2","ACACCGCTAAACACCA",4,65.95,6.75,-4.01,0.45,1.5,1.28,0.03,">1 nonsynonymous","R27G Q79N Y121V T148S",4
"lib1","SARS-CoV-2","ACACCGCTCAATTCAG",1,24.47,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V103P R127P P161L",3
"lib1","SARS-CoV-2","ACACCGCTCACAACAC",1,20.31,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y50P G86P F126E K132Q G166A L188E",6
"lib1","SARS-CoV-2","ACACCGGCCTAGACAG",1,0.65,NA,NA,NA,NA,NA,NA,"stop","K114F R124V T140* N157L",4
"lib1","SARS-CoV-2","ACACCGGCGGTAATAC",4,20.93,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","N107F K114S",2
"lib1","SARS-CoV-2","ACACCGGGCGGGAGAT",1,10.85,9.06,-1.7,0.28,1.5,1.06,0.03,">1 nonsynonymous","Y50L A67L",2
"lib1","SARS-CoV-2","ACACCGGTATAAATTG",3,44.3,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D68G L131T V173K",3
"lib1","SARS-CoV-2","ACACCGGTTCTCAATT",1,10.89,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","D34A G101Q",2
"lib1","SARS-CoV-2","ACACCGGTTCTCTCAA",2,0.42,NA,NA,NA,NA,NA,NA,"stop","T55C P82S Y119I C158H S164K G172*",6
"lib1","SARS-CoV-2","ACACCGTGTGTATACT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* N40L",2
"lib1","SARS-CoV-2","ACACCGTTACTAAAGA",2,0.8,NA,NA,NA,NA,NA,NA,"stop","L188*",1
"lib1","SARS-CoV-2","ACACCGTTCAAAATAA",2,27.34,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","G86R G155I G166R G172L",4
"lib1","SARS-CoV-2","ACACCGTTCTAATCCT",2,16.54,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F8M C61L A89D N107R K114N L122T C150V",7
"lib1","SARS-CoV-2","ACACCTAAATTAAGAC",3,39.66,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","V77F N92I C158P",3
"lib1","SARS-CoV-2","ACACCTAACCGGTAGC",6,28.85,6.5,-4.26,0.5,1.5,1.18,0.03,">1 nonsynonymous","L60F A81L A89L L188V A190F",5
"lib1","SARS-CoV-2","ACACCTAACTCTGCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L57* T140S G172N V182S P197K",5
"lib1","SARS-CoV-2","ACACCTAATCATTCAG",2,43.79,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","Y39N K114G I138S G146K G174W",5
"lib1","SARS-CoV-2","ACACCTAATTAATATT",4,92.84,10.8,0.03,0.05,2.95,1,0,"1 nonsynonymous","K198C",1
"lib1","SARS-CoV-2","ACACCTACCAGATACC",5,1.14,NA,NA,NA,NA,NA,NA,"stop","A22Q N120L G166R C195* T201N",5
"lib1","SARS-CoV-2","ACACCTACCTCGTAAC",2,25.38,10.18,-0.58,0.06,2.92,1.03,0,">1 nonsynonymous","T15I Y39W",2
"lib1","SARS-CoV-2","ACACCTACGAACCAAT",6,11.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2T C61P D68A P82Q W106L L131V",6
"lib1","SARS-CoV-2","ACACCTACGAAGCATA",6,84.25,10.69,-0.07,0.08,2.87,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ACACCTACTATTTGAC",2,36.57,10.46,-0.3,0.11,2.93,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACACCTAGAAATTCTA",9,126.52,10.74,-0.02,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACCTAGACGTTAAA",1,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97H I104R P197T",3
"lib1","SARS-CoV-2","ACACCTAGCTACCAAT",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S T63S",2
"lib1","SARS-CoV-2","ACACCTAGTCGAACGC",3,18,9.41,-1.35,0.09,2.86,1.09,0,">1 nonsynonymous","N4M T170R",2
"lib1","SARS-CoV-2","ACACCTATGGAAGAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61F G74D Y93P D112L F156M T170*",6
"lib1","SARS-CoV-2","ACACCTCAAACGCTTA",2,0.66,NA,NA,NA,NA,NA,NA,"stop","Y50* T55N Y175F",3
"lib1","SARS-CoV-2","ACACCTCACACCAAAG",2,51.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49F K87V N109S R124T T140G T148R",6
"lib1","SARS-CoV-2","ACACCTCACGATCAGC",8,144.09,10.72,-0.05,0.05,2.96,1.01,0,">1 nonsynonymous","S29T K132I T201Y",3
"lib1","SARS-CoV-2","ACACCTCCAAGAAGAA",1,15.48,10.76,-0.01,0.03,2.98,1.01,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","ACACCTCGAAAAATTA",4,72.75,10.04,-0.73,0.06,2.77,1.01,0,">1 nonsynonymous","N24Q N107K T201N",3
"lib1","SARS-CoV-2","ACACCTCGATAGAGAT",6,51.32,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A33E A42K C102L N107P K199P",5
"lib1","SARS-CoV-2","ACACCTCTGAACGCAA",2,48.21,6,-4.76,0.99,1.5,1.13,0.01,">1 nonsynonymous","C6E E10S Y91M D137L F167P",5
"lib1","SARS-CoV-2","ACACCTCTTAAAATGA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","D34* D90W T100G Y119I S164C",5
"lib1","SARS-CoV-2","ACACCTGAACTAAATG",1,18.24,10.55,-0.21,0.13,2.94,1.04,0.01,"1 nonsynonymous","I138L",1
"lib1","SARS-CoV-2","ACACCTGAGCGGAGGC",1,28.17,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G146I L162W",2
"lib1","SARS-CoV-2","ACACCTGGCTCACAAT",9,8.12,NA,NA,NA,NA,NA,NA,"stop","V32I D59S D97* P133V",4
"lib1","SARS-CoV-2","ACACCTGGGCCTGCCA",1,36.26,10.01,-0.75,0.14,2.72,1,0.01,">1 nonsynonymous","A18E S45M",2
"lib1","SARS-CoV-2","ACACCTTAAAGAACGC",2,25.13,6,-4.76,2,1.5,1.24,0.08,">1 nonsynonymous","K94S D112K",2
"lib1","SARS-CoV-2","ACACCTTACCGTCCAC",2,36.07,10.3,-0.46,0.07,2.87,1.07,0,">1 nonsynonymous","F47V L60V",2
"lib1","SARS-CoV-2","ACACCTTATATGACGT",6,23.59,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","A81L S113Y",2
"lib1","SARS-CoV-2","ACACCTTCTAGCATTA",2,50.95,10.83,0.06,0.07,2.99,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ACACCTTTAATGGAGG",6,8.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3R F17E C49I V103Y",4
"lib1","SARS-CoV-2","ACACCTTTACCCATAT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M C61T",2
"lib1","SARS-CoV-2","ACACCTTTATTCACAG",3,46.3,9.76,-1.01,0.11,2.27,1,0.01,">1 nonsynonymous","G9L S29E F134R",3
"lib1","SARS-CoV-2","ACACCTTTCACTGACA",5,42.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34W V180S",2
"lib1","SARS-CoV-2","ACACGAAAATTGGAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","W23L D34N P177T L187*",4
"lib1","SARS-CoV-2","ACACGAAACTCACAAA",1,60.88,9.73,-1.03,0.18,1.64,1.08,0.01,"1 nonsynonymous","D68T",1
"lib1","SARS-CoV-2","ACACGAAATAATCACA",6,98.1,9.88,-0.88,0.1,2.5,1.08,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","ACACGAAATTGCGCCC",1,21.14,8.67,-2.09,0.31,1.5,1.19,0.05,">1 nonsynonymous","F17T D90S",2
"lib1","SARS-CoV-2","ACACGAAATTTAACTA",4,34.12,9.57,-1.2,0.16,2.2,1.02,0.01,"1 nonsynonymous","E76K",1
"lib1","SARS-CoV-2","ACACGAACACAAGGGG",4,1.06,NA,NA,NA,NA,NA,NA,"stop","F44L T85* I88L G117A",4
"lib1","SARS-CoV-2","ACACGAACGACAGGAA",2,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85N S139Y Q176E",3
"lib1","SARS-CoV-2","ACACGAACGCGACCCC",1,48.18,6.05,-4.72,0.76,1.5,1.17,0.01,">1 nonsynonymous","K48C K94W Y119I R127L",4
"lib1","SARS-CoV-2","ACACGAACTTGCCTAA",6,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I F99N Q168Y A190Y",4
"lib1","SARS-CoV-2","ACACGAAGAGATTCTG",1,5.36,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S129F R136F G155I L183C",4
"lib1","SARS-CoV-2","ACACGAAGCAAGTCCC",2,38.2,9.52,-1.24,0.07,2.9,1.09,0,">1 nonsynonymous","Y35L F62S T170N",3
"lib1","SARS-CoV-2","ACACGAAGCGCCTATT",3,0.66,NA,NA,NA,NA,NA,NA,"stop","A14S L95* K128R",3
"lib1","SARS-CoV-2","ACACGAAGTGGCCAGT",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M V77W Y91P L131C",4
"lib1","SARS-CoV-2","ACACGAATAATACAGG",2,101.74,10.28,-0.49,0.09,2.71,1.01,0,">1 nonsynonymous","N1T F47W S53P T140N",4
"lib1","SARS-CoV-2","ACACGAATTTTTGAAA",2,19.32,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","E10C C158D T201C",3
"lib1","SARS-CoV-2","ACACGACAAAATAATT",8,65.88,10.16,-0.6,0.08,2.68,1,0,">1 nonsynonymous","T85R D90S I138K",3
"lib1","SARS-CoV-2","ACACGACAAACGAATT",6,75.97,10.09,-0.68,0.1,2.56,1,0,">1 nonsynonymous","L60E A89V",2
"lib1","SARS-CoV-2","ACACGACACATCAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35R C49M A81I A145G T201*",5
"lib1","SARS-CoV-2","ACACGACCAACCCTTG",2,45.35,10.12,-0.64,0.11,2.74,1.07,0,">1 nonsynonymous","V11F C61I L122Q Q144T",4
"lib1","SARS-CoV-2","ACACGACCAATAAAAC",2,64.06,10.77,0,0.06,2.92,1.03,0,">1 nonsynonymous","N64K N151S",2
"lib1","SARS-CoV-2","ACACGACCCCGCCACT",1,31.84,10.46,-0.31,0.03,2.96,1.01,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","ACACGACCTGTTCCTA",1,31.59,10.01,-0.75,0.05,2.85,1.04,0,">1 nonsynonymous","G9S Q144D G155E",3
"lib1","SARS-CoV-2","ACACGACGAAAATCGC",9,6.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43H L60P I138L P161D L183N",5
"lib1","SARS-CoV-2","ACACGACGAGTTGTAA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31V G86I D97F",3
"lib1","SARS-CoV-2","ACACGACGGCAACTAT",8,102.85,10.06,-0.71,0.11,2.37,1.06,0.01,">1 nonsynonymous","N1F S53F L60E",3
"lib1","SARS-CoV-2","ACACGACTGAATAGAA",2,24.76,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","P82Y Q144L",2
"lib1","SARS-CoV-2","ACACGACTGAGGCGTA",4,129.78,10,-0.76,0.09,2.12,1.04,0,">1 nonsynonymous","V181M L183I",2
"lib1","SARS-CoV-2","ACACGACTTCAAATGG",8,7.36,NA,NA,NA,NA,NA,NA,"stop","N1I S19* I28K T85K D90L R127G D137K Y178A",8
"lib1","SARS-CoV-2","ACACGAGAAAGTCTAG",1,26.02,10.55,-0.21,0.07,2.79,1.05,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","ACACGAGAAATACCTT",5,89.46,10.77,0.01,0.07,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACGAGAGAAGAATT",7,17.26,7.61,-3.16,0.3,1.53,1.11,0.03,">1 nonsynonymous","N4H V103K P169G",3
"lib1","SARS-CoV-2","ACACGAGATTTGACAC",1,5.83,6,-4.76,1.25,3,1.23,0.02,">1 nonsynonymous","Y39S C49M W106G",3
"lib1","SARS-CoV-2","ACACGAGCAAGTTTCC",1,27.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39S F44G D90C S147A C158S R179S",6
"lib1","SARS-CoV-2","ACACGAGCTAACACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H G146I",2
"lib1","SARS-CoV-2","ACACGAGGAATGTAAA",2,91.44,10.73,-0.04,0.08,2.86,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","ACACGAGGACTAATTC",10,90.37,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","I88N",1
"lib1","SARS-CoV-2","ACACGAGTCCTCGCTA",6,60.42,7.84,-2.92,0.23,1.5,1.03,0.02,">1 nonsynonymous","N64H L162E",2
"lib1","SARS-CoV-2","ACACGAGTCTAATTAA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F N30T F44W K56H D90F",5
"lib1","SARS-CoV-2","ACACGATAATCGACAT",2,37.86,10.88,0.12,0.09,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACGATAATTCATCC",3,50.5,7.2,-3.56,0.17,1.5,1.12,0.01,">1 nonsynonymous","C6W Y121S",2
"lib1","SARS-CoV-2","ACACGATACAACCTCT",5,0.97,NA,NA,NA,NA,NA,NA,"stop","C49* Y119M",2
"lib1","SARS-CoV-2","ACACGATAGCGGCAAG",4,70.44,10.52,-0.24,0.06,2.81,1.02,0,">1 nonsynonymous","N110K R127A",2
"lib1","SARS-CoV-2","ACACGATAGTCATACA",1,34.12,10.63,-0.14,0.08,2.97,1.02,0,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","ACACGATATATTCCTA",1,6.42,10.12,-0.64,0.13,2.94,1,0,">1 nonsynonymous","L57F T100S",2
"lib1","SARS-CoV-2","ACACGATCAAGTTGGC",2,51.5,10.75,-0.01,0.09,2.87,1.03,0,"1 nonsynonymous","R27C",1
"lib1","SARS-CoV-2","ACACGATCCCGCTTCC",2,2.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","ACACGATGCATAGTAA",7,66.43,6.37,-4.4,0.54,1.5,1.25,0.02,">1 nonsynonymous","S36L V103S",2
"lib1","SARS-CoV-2","ACACGATGTACAGAGT",2,6.07,6.03,-4.73,2,3,1.18,0.01,">1 nonsynonymous","I2T V37C T85S I104K P133T V180Q",6
"lib1","SARS-CoV-2","ACACGATTAATAAGGA",1,29,8.84,-1.93,0.13,2.69,1.08,0.01,">1 nonsynonymous","G74E Q84R A192L T193N",4
"lib1","SARS-CoV-2","ACACGATTCTTCGCCC",5,0.11,NA,NA,NA,NA,NA,NA,"stop","Y35D C61* T170G",3
"lib1","SARS-CoV-2","ACACGATTGCTCCAAC",9,66.99,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y39C V71M K94Y Y119A T201C",5
"lib1","SARS-CoV-2","ACACGATTTCCTAGCA",1,79.51,10.72,-0.04,0.06,2.97,1.01,0,">1 nonsynonymous","S139K K199S",2
"lib1","SARS-CoV-2","ACACGCAAGTTCAAAA",1,21.01,10.27,-0.49,0.08,2.82,1.06,0,">1 nonsynonymous","N13T V37E S113A",3
"lib1","SARS-CoV-2","ACACGCACTCAATATC",5,146.91,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","C158I",1
"lib1","SARS-CoV-2","ACACGCAGTCAAGCTC",3,49.23,9.15,-1.62,0.1,1.79,1.11,0,">1 nonsynonymous","R127E Y175W",2
"lib1","SARS-CoV-2","ACACGCATCAAAGATA",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A33S L125K F167T G174V",5
"lib1","SARS-CoV-2","ACACGCATTCGTTATC",2,8.28,6,-4.76,2,3,1.1,0,">1 nonsynonymous","Y35C C61R Y91F D98H D112K",5
"lib1","SARS-CoV-2","ACACGCCAATTTAATG",1,29.54,10.74,-0.02,0.12,2.85,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACACGCCCAGTTTGAG",2,0.84,NA,NA,NA,NA,NA,NA,"stop","A14I S129H S147N Y159*",4
"lib1","SARS-CoV-2","ACACGCCGCACGTAAT",1,24.28,10.71,-0.05,0.05,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACGCCGTCAAGGTT",3,0.18,NA,NA,NA,NA,NA,NA,"stop","N1* F8P T100S",3
"lib1","SARS-CoV-2","ACACGCCTACCGCAAT",5,54.02,9.13,-1.63,0.16,1.64,1.22,0.01,">1 nonsynonymous","D34W A81G F160E",3
"lib1","SARS-CoV-2","ACACGCGACACACTAG",4,50.97,10.65,-0.11,0.05,2.92,1.03,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","ACACGCGATGTCTTAA",7,81.34,10.64,-0.12,0.06,2.94,1.02,0,">1 nonsynonymous","D90Q K128L",2
"lib1","SARS-CoV-2","ACACGCGCAAACACAT",5,33,6,-4.76,2,3,1.25,0,">1 nonsynonymous","A33L D68T V77G I88S P96R",5
"lib1","SARS-CoV-2","ACACGCGGGGAACTAC",4,0.73,NA,NA,NA,NA,NA,NA,"stop","F44S D68I I88H N107C F126* F134S Q144V",7
"lib1","SARS-CoV-2","ACACGCGTAGTTGATA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","R25A N107* P149A",3
"lib1","SARS-CoV-2","ACACGCGTTCAATCAT",2,15.75,10.8,0.04,0.11,2.91,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACACGCTAGCTTATAT",3,42.19,8.05,-2.71,0.3,1.5,1.14,0.03,">1 nonsynonymous","P7L A14C E141K G146S N157D",5
"lib1","SARS-CoV-2","ACACGCTATAGTATCT",1,40.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8L N30L N120Y T148Y N157Y",5
"lib1","SARS-CoV-2","ACACGCTCAGCCTCCT",1,1.02,NA,NA,NA,NA,NA,NA,"stop","C31* Y39N K87* K94A A105E Y119H T201N",7
"lib1","SARS-CoV-2","ACACGCTGAATGAACT",5,144.62,10.51,-0.25,0.03,2.94,1.01,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","ACACGCTTCGGAAGAT",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K P82R N92M N107S",4
"lib1","SARS-CoV-2","ACACGCTTGAAAATAA",1,57.26,10.7,-0.07,0.05,2.93,1.05,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","ACACGCTTTAAACCGA",2,31.79,9.99,-0.78,0.12,2.57,1.05,0.01,">1 nonsynonymous","F12M K128I",2
"lib1","SARS-CoV-2","ACACGGACACCAAAAG",8,0.74,NA,NA,NA,NA,NA,NA,"stop","N40* G116A",2
"lib1","SARS-CoV-2","ACACGGACCCTTAAGC",8,3.19,NA,NA,NA,NA,NA,NA,"stop","D75S Y119* Y165T",3
"lib1","SARS-CoV-2","ACACGGACGGTCCTCT",11,47.09,7.03,-3.74,0.4,1.5,1.14,0.03,">1 nonsynonymous","T85A W106L V115R S129A G155S",5
"lib1","SARS-CoV-2","ACACGGACGTAAAGTA",9,79.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61Y C158V",2
"lib1","SARS-CoV-2","ACACGGAGATATATGC",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17P K87T",2
"lib1","SARS-CoV-2","ACACGGATAGATAGAG",4,2.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","ACACGGATATTTCAGT",4,176.53,6,-4.76,2,1.5,1.15,0,"1 nonsynonymous","P177Q",1
"lib1","SARS-CoV-2","ACACGGATGTGAATAT",7,81.63,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C31A Y175L",2
"lib1","SARS-CoV-2","ACACGGCCGACGGTAA",3,28.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C D97P R136S",3
"lib1","SARS-CoV-2","ACACGGCGAAATTCTA",8,37.69,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C61I N107I K114I",3
"lib1","SARS-CoV-2","ACACGGGAGAACTAGT",3,0.13,NA,NA,NA,NA,NA,NA,"stop","N4S S36*",2
"lib1","SARS-CoV-2","ACACGGGCACATGATA",4,71.7,10.23,-0.53,0.04,2.83,1,0,"1 nonsynonymous","L57N",1
"lib1","SARS-CoV-2","ACACGGGCCCATTTAA",7,43.18,10.22,-0.54,0.05,2.92,1,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","ACACGGGGTACGGAAT",3,0.9,NA,NA,NA,NA,NA,NA,"stop","S29* T46C Y91T G166S",4
"lib1","SARS-CoV-2","ACACGGTAGGAATGAG",1,36.6,10.29,-0.48,0.09,2.71,1,0,"1 nonsynonymous","C31F",1
"lib1","SARS-CoV-2","ACACGTAAAACTTTAC",2,17.62,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G117N R136F Q144R",3
"lib1","SARS-CoV-2","ACACGTAACTTGACCG",3,0,NA,NA,NA,NA,NA,NA,"stop","N24* T46I T85P T140L",4
"lib1","SARS-CoV-2","ACACGTAATAATATTA",3,39.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19L C49F N64P P133T E141M T148L",6
"lib1","SARS-CoV-2","ACACGTACCGCAACTA",1,9.22,9.19,-1.58,0.22,2.59,1.36,0.03,">1 nonsynonymous","T63C K87L Q163S V173G",4
"lib1","SARS-CoV-2","ACACGTACGGCACTGG",3,1.67,NA,NA,NA,NA,NA,NA,"stop","G86I Y93S V103*",3
"lib1","SARS-CoV-2","ACACGTACGTACTAAC",4,151.44,10.7,-0.07,0.04,2.91,1.03,0,"1 nonsynonymous","V115D",1
"lib1","SARS-CoV-2","ACACGTATACTCTTCA",9,70.73,6.77,-3.99,0.18,1.5,1.12,0.01,">1 nonsynonymous","C6V F62Y D98N G146V",4
"lib1","SARS-CoV-2","ACACGTATTACCCCGG",1,27.46,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C31S G51N F70Q K87N D97V",5
"lib1","SARS-CoV-2","ACACGTCACTATATGT",6,53.21,8.97,-1.8,0.32,1.5,1,0.04,">1 nonsynonymous","Y50L N64D",2
"lib1","SARS-CoV-2","ACACGTCCACCCCACC",10,96.9,6,-4.76,1.66,1.5,1.16,0,">1 nonsynonymous","I2S F44S G51V I80L N118S N130T G152N",7
"lib1","SARS-CoV-2","ACACGTCCCGCAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S113W R124* E154K K198*",4
"lib1","SARS-CoV-2","ACACGTCGCTTAGTTT",3,21,6,-4.76,0.86,1.5,1.14,0.01,">1 nonsynonymous","I28G I80E",2
"lib1","SARS-CoV-2","ACACGTCTAACAGACC",8,116.17,10.73,-0.03,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACGTGATCAAGCTC",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R V103S P149I",3
"lib1","SARS-CoV-2","ACACGTGATGTACTGC",1,16.97,10.8,0.04,0.22,2.6,1.07,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ACACGTGCTGTGAGGA",3,61.94,9.92,-0.85,0.08,2.83,1.06,0,">1 nonsynonymous","F62T T170M",2
"lib1","SARS-CoV-2","ACACGTGTGCTGTTGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","D68G L162*",2
"lib1","SARS-CoV-2","ACACGTTCTTCACATA",5,47.07,6.72,-4.05,0.45,1.5,1.13,0.02,">1 nonsynonymous","I80G D97V",2
"lib1","SARS-CoV-2","ACACGTTGTGGTCACG",6,35.89,8.48,-2.29,0.13,1.92,1.05,0.01,">1 nonsynonymous","Y39A C61L R78L G155V",4
"lib1","SARS-CoV-2","ACACGTTTACCGCCTG",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K D90I W106S S113C",4
"lib1","SARS-CoV-2","ACACGTTTATAGAACA",8,43.12,9.05,-1.71,0.17,2.2,1.13,0.01,">1 nonsynonymous","N107M S147G",2
"lib1","SARS-CoV-2","ACACTAAAAGATAGAG",1,18.21,10.76,0,0.04,2.94,1,0,">1 nonsynonymous","I2E C61S F160V",3
"lib1","SARS-CoV-2","ACACTAAAGAGCAATG",3,8.75,NA,NA,NA,NA,NA,NA,"stop","I2N V37* Y91T L183N",4
"lib1","SARS-CoV-2","ACACTAAAGATACATT",2,7.49,6.84,-3.93,0.63,1.5,1.04,0.07,">1 nonsynonymous","T3I Y35G N107Y S113R V153R",5
"lib1","SARS-CoV-2","ACACTAAATGTTAATA",1,44.7,10.74,-0.03,0.06,2.85,1.11,0,">1 nonsynonymous","T63P P197Q",2
"lib1","SARS-CoV-2","ACACTAAATTCTGAAT",8,145.19,10.21,-0.55,0.03,2.83,1.02,0,"1 nonsynonymous","G51T",1
"lib1","SARS-CoV-2","ACACTAAATTTGTAAT",4,36.9,9.78,-0.98,0.08,2.83,1.08,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","ACACTAACATAATAGG",1,40.21,8.41,-2.35,0.19,2.91,1.02,0.01,">1 nonsynonymous","G9E P54S F126S T148S",4
"lib1","SARS-CoV-2","ACACTAACATGGCGAT",3,6.82,6.69,-4.07,0.3,3,1.01,0.01,">1 nonsynonymous","A105P G117S",2
"lib1","SARS-CoV-2","ACACTAACCATGTCCA",2,0.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","ACACTAACCGTAGATT",4,42.94,10.84,0.08,0.09,2.88,1.07,0,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","ACACTAAGCCCCTTAA",2,20.71,10.42,-0.34,0.13,2.6,1.03,0.01,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","ACACTAATCTGCTGAA",2,43.83,10.62,-0.14,0.08,2.85,1,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","ACACTAATGCACGAAA",7,209.66,10.58,-0.18,0.03,2.93,1.04,0,">1 nonsynonymous","N4R K87H",2
"lib1","SARS-CoV-2","ACACTAATGGTACATA",2,16.11,10.84,0.07,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTAATTTAGGTTG",2,20.13,9.51,-1.25,0.06,2.83,1.11,0,">1 nonsynonymous","Y119K K128W",2
"lib1","SARS-CoV-2","ACACTACAGCCGGTAT",1,17.83,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I72G N110Y",2
"lib1","SARS-CoV-2","ACACTACATAGAGGAA",2,27.03,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F99I R136Y",2
"lib1","SARS-CoV-2","ACACTACATATAAGGT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","C49M L131*",2
"lib1","SARS-CoV-2","ACACTACCATGAGTCA",11,0.95,NA,NA,NA,NA,NA,NA,"stop","Y35L Q84M D112* V153*",4
"lib1","SARS-CoV-2","ACACTACCCGCCGTGG",1,6.93,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","A14F S43L G83V Y119A E154G",5
"lib1","SARS-CoV-2","ACACTACCCTTTGAAA",3,50.33,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","V77K P161L",2
"lib1","SARS-CoV-2","ACACTACCTCACATGT",4,10.93,10.16,-0.61,0.13,2.75,1,0.01,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","ACACTACGAAGAAGAC",2,14.49,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","F12W C49G D98I I142T V173I",5
"lib1","SARS-CoV-2","ACACTACGGACATAAA",2,45.48,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","F99R P161E Y178F",3
"lib1","SARS-CoV-2","ACACTACGGTCAAAAC",5,15.11,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","C61R Q84M C150S V180T",4
"lib1","SARS-CoV-2","ACACTACTAAGAATAA",1,148.6,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","F8S K26S D68Q V77Q Y178I",5
"lib1","SARS-CoV-2","ACACTACTCAAAACAT",7,135.7,10.11,-0.66,0.09,2.69,1,0,">1 nonsynonymous","Y35C F62L K132C",3
"lib1","SARS-CoV-2","ACACTACTCATTCTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D F44I S129T P149V G172R T201N",6
"lib1","SARS-CoV-2","ACACTAGAAAACTCGA",7,43.65,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K56C R78L Y91P",3
"lib1","SARS-CoV-2","ACACTAGAATATCAGT",3,63.41,9.5,-1.26,0.23,1.56,1.1,0.02,">1 nonsynonymous","G9R P133N V181I",3
"lib1","SARS-CoV-2","ACACTAGACTACTCGA",1,42.78,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F8P F126G G166D",3
"lib1","SARS-CoV-2","ACACTAGATCTAAATC",4,69.89,9.84,-0.92,0.1,2.17,1.06,0,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","ACACTAGCCTCATGGT",4,45.23,10.74,-0.02,0.08,2.85,1.11,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ACACTAGGAACCAATA",2,26.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D97L V103C A190C",3
"lib1","SARS-CoV-2","ACACTAGGAGAATATT",4,55.3,10.29,-0.47,0.04,2.94,1.03,0,">1 nonsynonymous","K87S T201L",2
"lib1","SARS-CoV-2","ACACTAGTCAATGATC",16,3.98,NA,NA,NA,NA,NA,NA,"stop","F44* L60T V173P Q176K",4
"lib1","SARS-CoV-2","ACACTATAACACTACG",1,46.47,10.53,-0.24,0.07,2.89,1.01,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","ACACTATAACCAACCC",1,0,NA,NA,NA,NA,NA,NA,"stop","C31Q G83* A89T G117R T140H",5
"lib1","SARS-CoV-2","ACACTATATATGTGTA",1,20.72,9.71,-1.05,0.11,2.9,1,0.01,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","ACACTATCCCCGTAAA",1,25.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M S41R F47V G116L",4
"lib1","SARS-CoV-2","ACACTATTAATACCCG",5,0.81,NA,NA,NA,NA,NA,NA,"stop","Y50I W106L K128L Y175G S200*",5
"lib1","SARS-CoV-2","ACACTATTACAAGGCT",2,16.09,9.14,-1.62,0.3,2.73,1.1,0.05,">1 nonsynonymous","A42I G116I Q176L T201N",4
"lib1","SARS-CoV-2","ACACTATTCAGCCCGT",8,2.8,NA,NA,NA,NA,NA,NA,"stop","Y39L A67I T201*",3
"lib1","SARS-CoV-2","ACACTATTTATGCAAT",6,29.25,8.42,-2.34,0.13,2.78,1.05,0.01,">1 nonsynonymous","N4L E154L T170F",3
"lib1","SARS-CoV-2","ACACTATTTTTAAAAA",6,41.86,8.71,-2.06,0.22,1.5,1.06,0.02,">1 nonsynonymous","V11D S19T",2
"lib1","SARS-CoV-2","ACACTCAACCACCCAT",3,111.96,10.81,0.04,0.05,2.93,1.06,0,">1 nonsynonymous","V77L T201N",2
"lib1","SARS-CoV-2","ACACTCAACGCAGAAT",4,19.18,6,-4.76,1.81,3,1.19,0.01,">1 nonsynonymous","C6N N58F V71P",3
"lib1","SARS-CoV-2","ACACTCAAGACAAACA",9,70.45,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5R T46D K56R R127M Y165F",5
"lib1","SARS-CoV-2","ACACTCAAGACATGCA",6,45.54,10.47,-0.29,0.06,2.91,1.02,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","ACACTCAAGTTGCATA",3,0.84,NA,NA,NA,NA,NA,NA,"stop","D98* S113L N120P",3
"lib1","SARS-CoV-2","ACACTCACAACAGCAG",4,14.65,8.54,-2.23,0.37,1.5,1.06,0.05,">1 nonsynonymous","V37S S69R T140Y E154H",4
"lib1","SARS-CoV-2","ACACTCACAATCTTGG",3,29.35,10.69,-0.08,0.08,2.84,1.12,0,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","ACACTCACACCCAACC",5,79.05,6.56,-4.2,0.41,1.5,1.13,0.02,">1 nonsynonymous","S69R V103L S113P",3
"lib1","SARS-CoV-2","ACACTCACATGCCTAA",3,1.22,NA,NA,NA,NA,NA,NA,"stop","G86T L95* G155R T201*",4
"lib1","SARS-CoV-2","ACACTCACGAATAGTA",10,59.34,7.29,-3.47,0.4,1.5,1.13,0.04,">1 nonsynonymous","C61F A105V G152Y S200L",4
"lib1","SARS-CoV-2","ACACTCAGATTATCTC",9,103.82,8.74,-2.02,0.1,2.72,1.1,0,">1 nonsynonymous","T3L S69T G117A A192S",4
"lib1","SARS-CoV-2","ACACTCATATTAAAAC",1,30.07,8.68,-2.08,0.14,2.6,1.13,0.01,">1 nonsynonymous","D75M E141K N157S",3
"lib1","SARS-CoV-2","ACACTCATTTGGAACT",13,136.62,9.99,-0.78,0.07,2.36,1.03,0,">1 nonsynonymous","I2G Q84H P133F",3
"lib1","SARS-CoV-2","ACACTCCAAAAAGGAA",2,13.85,6.3,-4.47,0.98,1.5,1.21,0.02,">1 nonsynonymous","F44L Y50R L95T R136T",4
"lib1","SARS-CoV-2","ACACTCCAACATTGAT",2,8.75,11,0.24,0.09,2.95,1.02,0,"1 nonsynonymous","S129N",1
"lib1","SARS-CoV-2","ACACTCCACAGCATTA",1,5.24,10.71,-0.06,0.25,2.87,1.16,0,">1 nonsynonymous","Y35S K48R",2
"lib1","SARS-CoV-2","ACACTCCATCCGTATA",12,144.95,10.05,-0.72,0.07,2.49,1.03,0,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","ACACTCCATGGATTTG",5,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y93M F99S R136L C195F",5
"lib1","SARS-CoV-2","ACACTCCCGCCTATAA",4,1.2,NA,NA,NA,NA,NA,NA,"stop","S45R K94* L131*",3
"lib1","SARS-CoV-2","ACACTCCCGTCACCCA",5,34.45,6.46,-4.31,0.49,1.5,1.15,0.02,">1 nonsynonymous","G51I T63P",2
"lib1","SARS-CoV-2","ACACTCCGGTTTAAAA",2,20.77,10.29,-0.48,0.05,2.84,1.07,0,">1 nonsynonymous","R16A N40F I142L",3
"lib1","SARS-CoV-2","ACACTCCTACCTGGCG",6,76.17,10.62,-0.14,0.05,2.87,1.06,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","ACACTCCTCCATATAT",1,52.18,10.84,0.08,0.1,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTCGATCAGCTTA",3,68.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G N107F",2
"lib1","SARS-CoV-2","ACACTCGCCATTGGGC",6,28.64,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N40L G83Y K94L G166L G174L",5
"lib1","SARS-CoV-2","ACACTCGCCGAACCAT",2,11.85,6.32,-4.45,0.7,1.5,1.09,0.03,">1 nonsynonymous","S19T S53R N120L K128S R136H G155Y C158F",7
"lib1","SARS-CoV-2","ACACTCGTATTAGAAC",2,6.2,10.69,-0.07,0.54,1.84,1,0.03,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","ACACTCGTGCAACGCG",5,61.34,10.68,-0.08,0.05,2.91,1.04,0,">1 nonsynonymous","F160M L187C T201K",3
"lib1","SARS-CoV-2","ACACTCGTTTGTACTA",10,128.62,9.85,-0.91,0.04,2.92,1.03,0,">1 nonsynonymous","T100N Q168E",2
"lib1","SARS-CoV-2","ACACTCTAAGCACTGA",2,86.12,9.66,-1.1,0.05,2.88,1.06,0,">1 nonsynonymous","I88V L125V A190T",3
"lib1","SARS-CoV-2","ACACTCTACCCCGTAG",2,14.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14Q V71L S113P T140H",4
"lib1","SARS-CoV-2","ACACTCTATTCAATGC",3,218.89,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","S43G I138Q G172Q V180T",4
"lib1","SARS-CoV-2","ACACTCTGAAGGACAC",1,20.36,10.1,-0.67,0.15,2.01,1.08,0.01,"1 nonsynonymous","F99H",1
"lib1","SARS-CoV-2","ACACTCTGGCCGATCT",2,78.67,8.71,-2.06,0.09,2.85,1.13,0,">1 nonsynonymous","Y35V A42G C61I I104V F126K",5
"lib1","SARS-CoV-2","ACACTCTTACTTACCA",5,71.76,9.9,-0.87,0.04,2.83,1.04,0,">1 nonsynonymous","N1M Y35L S129V E154W",4
"lib1","SARS-CoV-2","ACACTGAAAAGTTTTA",9,172.83,10.65,-0.11,0.06,2.88,1.09,0,"1 nonsynonymous","F99W",1
"lib1","SARS-CoV-2","ACACTGAATCCGACCA",5,20.04,9.7,-1.06,0.15,2.58,1.08,0.01,">1 nonsynonymous","D34G S53M K87R H189Q",4
"lib1","SARS-CoV-2","ACACTGAATTATAAAA",5,82.89,10.3,-0.46,0.03,2.93,1.03,0,">1 nonsynonymous","Y66L F156V",2
"lib1","SARS-CoV-2","ACACTGACTGGCAGCC",2,3.41,NA,NA,NA,NA,NA,NA,"stop","S41A K128* F156I",3
"lib1","SARS-CoV-2","ACACTGATAGGTTGTG",6,34.57,6,-4.76,1.67,1.5,1.17,0.02,">1 nonsynonymous","C6N F17M N40M R179A",4
"lib1","SARS-CoV-2","ACACTGATTAAGTTTT",5,17.34,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","K56P I88L W106Q",3
"lib1","SARS-CoV-2","ACACTGCAAAATGGGC",3,29.28,6.95,-3.81,0.55,1.5,1.13,0.06,">1 nonsynonymous","V103G Q163Y V173E",3
"lib1","SARS-CoV-2","ACACTGCAATTAGGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F Y50H N171A Y178M",4
"lib1","SARS-CoV-2","ACACTGCACCATCCGC",13,188.44,10.74,-0.02,0.07,2.91,1.04,0,">1 nonsynonymous","F62M P149K",2
"lib1","SARS-CoV-2","ACACTGCATCAACTGA",4,80.94,9.84,-0.92,0.03,2.86,1.05,0,">1 nonsynonymous","Y35V Y143M",2
"lib1","SARS-CoV-2","ACACTGCCGGTCAATC",1,6.97,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","K48G L122R R136F V181K S200G",5
"lib1","SARS-CoV-2","ACACTGCCTAAACACG",6,43.28,10.7,-0.07,0.09,2.92,1.06,0,">1 nonsynonymous","N120K E141A",2
"lib1","SARS-CoV-2","ACACTGCGTCCAAACG",3,50.77,10.61,-0.15,0.08,2.91,1.03,0,">1 nonsynonymous","P133A N171I",2
"lib1","SARS-CoV-2","ACACTGCTAAATTAAT",1,6.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G Y93L W106M C195G",4
"lib1","SARS-CoV-2","ACACTGCTAACTATCT",4,29.76,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","A33K F47N",2
"lib1","SARS-CoV-2","ACACTGCTACCCAAGT",7,57.17,10.82,0.06,0.06,2.96,1.01,0,">1 nonsynonymous","L5C T201M",2
"lib1","SARS-CoV-2","ACACTGGATGAACAAA",1,11.87,10.47,-0.3,0.12,2.87,1.1,0.01,">1 nonsynonymous","N110C K114E",2
"lib1","SARS-CoV-2","ACACTGTCAGAAATTG",14,1660.09,10.72,-0.05,0.04,2.94,1.03,0,">1 nonsynonymous","T55L T148L",2
"lib1","SARS-CoV-2","ACACTGTCGCCATTCA",1,50.74,8.74,-2.02,0.1,2.58,1.13,0,">1 nonsynonymous","N58F G117L P197M",3
"lib1","SARS-CoV-2","ACACTGTGAGTGGATT",3,49.85,10.79,0.03,0.07,2.86,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACACTGTGCGGTCTAA",2,48.88,9.97,-0.8,0.08,2.75,1.04,0,"1 nonsynonymous","C6I",1
"lib1","SARS-CoV-2","ACACTGTGCTAGACAG",2,16.38,8.57,-2.2,0.12,2.84,1.05,0.01,">1 nonsynonymous","R73Y K199S",2
"lib1","SARS-CoV-2","ACACTGTGCTCACCGC",15,66.9,10.76,0,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTTAAAAATACTT",2,13.68,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","I2L E10C I72M L95S Y121H",5
"lib1","SARS-CoV-2","ACACTTAAAATTAAAC",4,11.29,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","A89L P96L",2
"lib1","SARS-CoV-2","ACACTTAAACTTGGAT",8,80.4,10.63,-0.13,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTTAAATGCATAC",7,21.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13Y Y39F N107D F134V G146R",5
"lib1","SARS-CoV-2","ACACTTAATGCCGCAA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R T85S V103P K114T V173A",5
"lib1","SARS-CoV-2","ACACTTAATTGTTAAT",7,1.96,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","ACACTTACAGGCCGTA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N24* K94E G101R",3
"lib1","SARS-CoV-2","ACACTTAGACAATGGG",3,20.47,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6F G152V Y165R",3
"lib1","SARS-CoV-2","ACACTTAGAGTGATAG",3,70.74,10.72,-0.05,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTTAGGCGAGAAC",6,177.65,10.12,-0.64,0.08,2.59,1.01,0,">1 nonsynonymous","A22M I104T I142L N151H Y178H",5
"lib1","SARS-CoV-2","ACACTTAGGCTCCTCC",3,5.98,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L38T F167V S200R",3
"lib1","SARS-CoV-2","ACACTTATACTCAGGC",5,82.62,8.75,-2.02,0.13,2.09,1.07,0.01,">1 nonsynonymous","N107L A192V",2
"lib1","SARS-CoV-2","ACACTTATAGAAACGT",13,60.49,6,-4.76,1.02,1.5,1.21,0.01,">1 nonsynonymous","A14P Q84P E135G Q176L",4
"lib1","SARS-CoV-2","ACACTTATAGGTGAAA",7,129.07,9.99,-0.78,0.07,2.57,1.01,0,">1 nonsynonymous","P7I F160C L187Y P197H",4
"lib1","SARS-CoV-2","ACACTTCAATTCAAAA",3,31.28,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","N4D N13L Y35M G101V T140R G152C",6
"lib1","SARS-CoV-2","ACACTTCAGACAAGAA",1,83.94,8.63,-2.13,0.08,2.71,1.17,0,">1 nonsynonymous","D98Y A145F",2
"lib1","SARS-CoV-2","ACACTTCAGCCCCAGA",2,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L N13R A89L D97V A190F",5
"lib1","SARS-CoV-2","ACACTTCCAGTGATCT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","Q84I D90A T201*",3
"lib1","SARS-CoV-2","ACACTTCCCCCCTTGT",4,56.25,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I28D I88N K94G W106V S139L G152N",6
"lib1","SARS-CoV-2","ACACTTCCTCCTAACA",2,16.89,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S45H C102Q N110G P191N",4
"lib1","SARS-CoV-2","ACACTTCTAAAACTCA",2,63.61,10.21,-0.55,0.09,2.75,1.03,0,">1 nonsynonymous","V37R N64A Y91V",3
"lib1","SARS-CoV-2","ACACTTCTGTCAACGA",5,41.89,6.91,-3.85,0.28,1.5,1.15,0.01,">1 nonsynonymous","G9L S139V E154N V173G T201Q",5
"lib1","SARS-CoV-2","ACACTTCTTTGAAGAC",5,38.38,10.74,-0.03,0.05,2.97,1,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","ACACTTGAATGATGAT",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A33L W106S C158S",4
"lib1","SARS-CoV-2","ACACTTGACATAAATG",5,44.24,6.01,-4.75,0.95,1.5,1.18,0.02,">1 nonsynonymous","R73C T100S R136L",3
"lib1","SARS-CoV-2","ACACTTGACGAAAATG",4,48.78,10.27,-0.49,0.05,2.84,1.02,0,"1 nonsynonymous","P133N",1
"lib1","SARS-CoV-2","ACACTTGATACGTCCG",2,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63P F167Q Y175L S184A",4
"lib1","SARS-CoV-2","ACACTTGATATTAAAT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","L5* G86D",2
"lib1","SARS-CoV-2","ACACTTGCAGATTAAT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","S45Q T170*",2
"lib1","SARS-CoV-2","ACACTTGCATCTCGAT",3,13.38,6,-4.76,2,1.5,1.42,0.07,">1 nonsynonymous","L5Q S41E N58P N92V Y143A",5
"lib1","SARS-CoV-2","ACACTTGCCAAATCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S P82S G86M G116V",4
"lib1","SARS-CoV-2","ACACTTGCTCATCTCT",3,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G K94A G155W",3
"lib1","SARS-CoV-2","ACACTTGGAATATAAC",3,28.98,10.44,-0.32,0.07,2.92,1,0,">1 nonsynonymous","A89T A192L T201M",3
"lib1","SARS-CoV-2","ACACTTGTACTTTAGG",6,28.66,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","S45L G86W K94P",3
"lib1","SARS-CoV-2","ACACTTGTGGGTTGTA",1,14.7,10.41,-0.35,0.15,2.52,1.32,0.01,">1 nonsynonymous","L5N T85M",2
"lib1","SARS-CoV-2","ACACTTTAATGACGGG",4,19.97,7.27,-3.5,0.35,1.5,1.35,0.04,">1 nonsynonymous","K56M P96F",2
"lib1","SARS-CoV-2","ACACTTTACAGAAGCT",3,32.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9R G86Y W106R F156L",4
"lib1","SARS-CoV-2","ACACTTTCCTAAGCAT",2,18.22,6,-4.76,2,3,1.32,0.02,">1 nonsynonymous","A33R Y50I L60M",3
"lib1","SARS-CoV-2","ACACTTTCTAACTAAG",19,189.78,10.66,-0.11,0.05,2.93,1.03,0,"1 nonsynonymous","A42W",1
"lib1","SARS-CoV-2","ACACTTTGAAAATATA",2,33.77,8.16,-2.6,0.34,1.5,1.05,0.04,">1 nonsynonymous","S43Y D68Q",2
"lib1","SARS-CoV-2","ACACTTTGATCCAGAA",4,35.12,6.3,-4.47,0.82,1.5,1.15,0.04,">1 nonsynonymous","A81E W106V S129P Q144E T170W",5
"lib1","SARS-CoV-2","ACACTTTTACATTTAT",4,19.14,10.7,-0.07,0.06,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACACTTTTCCACGTCA",6,137.67,8.71,-2.05,0.24,1.5,1.08,0.02,">1 nonsynonymous","L38S S45Y K132N",3
"lib1","SARS-CoV-2","ACAGAAAAAAGCCGCT",1,24.22,10.74,-0.02,0.1,2.94,1.06,0,"1 nonsynonymous","I104M",1
"lib1","SARS-CoV-2","ACAGAAAACAGTATCG",3,57.48,10.61,-0.15,0.07,2.93,1.05,0,"1 nonsynonymous","A33S",1
"lib1","SARS-CoV-2","ACAGAAAACTACGTAG",12,53.89,10.06,-0.71,0.11,2.19,1.06,0.01,">1 nonsynonymous","D90V V173R A190V",3
"lib1","SARS-CoV-2","ACAGAAAAGCCATAGT",7,13.05,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N13S P82S Y121R G155S",4
"lib1","SARS-CoV-2","ACAGAAAAGCGACAAA",4,28.26,7.6,-3.17,0.42,1.5,1,0.03,"1 nonsynonymous","I72Y",1
"lib1","SARS-CoV-2","ACAGAAAATTTGAGCT",2,19.22,6.57,-4.2,0.2,2.91,1.08,0,">1 nonsynonymous","P82S S147Y F160C",3
"lib1","SARS-CoV-2","ACAGAAACAAAGCGGA",9,85.39,9.57,-1.19,0.15,1.68,1.11,0.01,">1 nonsynonymous","A22S V52D P149I",3
"lib1","SARS-CoV-2","ACAGAAACAATGCAAA",7,21.6,7.02,-3.74,0.32,1.5,1.16,0.03,">1 nonsynonymous","S41I Y50N",2
"lib1","SARS-CoV-2","ACAGAAACACCCCTTC",3,55.63,9.01,-1.75,0.12,2.56,1.1,0.01,">1 nonsynonymous","G9M I142N",2
"lib1","SARS-CoV-2","ACAGAAACATCAACAT",3,20.81,8.26,-2.51,0.24,1.63,1.17,0.02,">1 nonsynonymous","C6S L60V I138S F185L",4
"lib1","SARS-CoV-2","ACAGAAACCCCCGTCA",4,25.13,9.92,-0.84,0.21,1.86,1.12,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","ACAGAAAGGAGTATTA",6,18.18,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2A I104M E135I Y143C T201S",5
"lib1","SARS-CoV-2","ACAGAAAGGATGAAAT",2,60.58,10.54,-0.22,0.06,2.9,1.09,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","ACAGAAAGTCCTCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1E V37* T55F A89D D97V S139K S147T",7
"lib1","SARS-CoV-2","ACAGAAAGTCTGTACA",2,9.89,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T15I C61M L95C",3
"lib1","SARS-CoV-2","ACAGAAATAATTGCTA",4,60.31,10.8,0.04,0.06,2.9,1.06,0,">1 nonsynonymous","S43I L60Y T100C",3
"lib1","SARS-CoV-2","ACAGAAATATTGATAA",12,329.38,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y93K T100N",2
"lib1","SARS-CoV-2","ACAGAAATCAATACCA",1,31.44,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y91P F156R",2
"lib1","SARS-CoV-2","ACAGAAATGCTATCCA",5,14.01,6.22,-4.55,0.2,2.81,1.13,0,">1 nonsynonymous","L5Q D34A K87Q K132D G155C",5
"lib1","SARS-CoV-2","ACAGAAATGCTGATTA",3,54.86,10.57,-0.19,0.05,2.91,1.02,0,"1 nonsynonymous","E10N",1
"lib1","SARS-CoV-2","ACAGAAATGGCGACGC",7,107.59,7.21,-3.56,0.16,1.5,1.1,0.01,">1 nonsynonymous","S113A R127E",2
"lib1","SARS-CoV-2","ACAGAAATTGGTCAGC",7,24.17,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V65T D90S G101S R124D",4
"lib1","SARS-CoV-2","ACAGAACAAAGTACGA",6,85.3,10.58,-0.18,0.04,2.9,1.04,0,"1 nonsynonymous","A22T",1
"lib1","SARS-CoV-2","ACAGAACAACTTGAAT",7,2.97,NA,NA,NA,NA,NA,NA,"stop","Y35M F44* D90P Y143S",4
"lib1","SARS-CoV-2","ACAGAACAATAAATCC",1,50.49,10.74,-0.03,0.07,2.91,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGAACAATGGTAGG",3,36.41,9.7,-1.06,0.16,2.17,1.05,0.01,">1 nonsynonymous","L60T Q144L",2
"lib1","SARS-CoV-2","ACAGAACACGCTATGA",9,25.58,6.03,-4.74,1.13,1.5,1.14,0.03,"1 nonsynonymous","L95W",1
"lib1","SARS-CoV-2","ACAGAACCACGCCGTA",2,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23Q V37S S43P N92D D98Y S113V P161L S184D",8
"lib1","SARS-CoV-2","ACAGAACCACGGGTGC",6,2.61,NA,NA,NA,NA,NA,NA,"stop","I2S T15* C61H D137Y G174L",5
"lib1","SARS-CoV-2","ACAGAACCGGCAGATG",3,119.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86S Y93K F99N",3
"lib1","SARS-CoV-2","ACAGAACGCAATCCAA",5,13.27,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N13H K56S V103M I142P L183F",5
"lib1","SARS-CoV-2","ACAGAACGTAACACAT",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L D90L P133T",3
"lib1","SARS-CoV-2","ACAGAACTAGTCCGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77G N92P T140H",3
"lib1","SARS-CoV-2","ACAGAACTGACAAACT",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C R27T K87R C158Q",4
"lib1","SARS-CoV-2","ACAGAACTTCGAACAC",1,103.37,9.31,-1.46,0.06,2.88,1.06,0,">1 nonsynonymous","S41T N130R G166K",3
"lib1","SARS-CoV-2","ACAGAAGACGTGTAGC",3,40.15,6.43,-4.33,0.72,1.5,1.21,0.03,">1 nonsynonymous","V103M G166T",2
"lib1","SARS-CoV-2","ACAGAAGCATAAACGT",1,42.69,10.67,-0.09,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGAAGCCCACAAAT",1,52.95,8.68,-2.08,0.08,2.7,1.12,0,">1 nonsynonymous","Y39I G146V",2
"lib1","SARS-CoV-2","ACAGAAGGGACAGAAA",4,0.2,NA,NA,NA,NA,NA,NA,"stop","F44Y S69* G86L",3
"lib1","SARS-CoV-2","ACAGAATAATACGTGG",4,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59Y D98A",2
"lib1","SARS-CoV-2","ACAGAATACATGGTAT",4,13.15,6,-4.76,2,1.5,1.3,0.08,">1 nonsynonymous","C6A V11C S41P L60E G152V",5
"lib1","SARS-CoV-2","ACAGAATAGACCCAAT",4,51.15,6.6,-4.16,0.4,1.5,1.08,0.02,">1 nonsynonymous","G101D P197T",2
"lib1","SARS-CoV-2","ACAGAATAGGGTTTGT",14,7.3,NA,NA,NA,NA,NA,NA,"stop","S45M S113*",2
"lib1","SARS-CoV-2","ACAGAATATATTAATT",2,2.77,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACAGAATCATCTTCTT",4,22.26,10.74,-0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGAATCGAGTAACG",3,42.68,9.07,-1.69,0.1,1.9,1.15,0,">1 nonsynonymous","A22K D112V",2
"lib1","SARS-CoV-2","ACAGAATCTTGAGTAC",3,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27N V77T V103R G117K",4
"lib1","SARS-CoV-2","ACAGAATGCAAAACAA",6,4.29,NA,NA,NA,NA,NA,NA,"stop","G9W G74R D90V V103A V115W Q144*",6
"lib1","SARS-CoV-2","ACAGAATGTTACGGGT",7,42.09,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51V L95D Y159W",3
"lib1","SARS-CoV-2","ACAGAATTAGGAAGGA",2,29.4,9.63,-1.14,0.3,1.5,1.14,0.03,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","ACAGACAAAACCCCAC",1,17.13,6,-4.76,2,3,1.15,0.02,">1 nonsynonymous","N1F E10L Y35A C61S D75W K132V P161S",7
"lib1","SARS-CoV-2","ACAGACAAAAGACAGC",5,89.53,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P7I P82L G86S",3
"lib1","SARS-CoV-2","ACAGACAAAGGTATCC",2,14.86,7.04,-3.72,0.51,1.5,1.02,0.03,">1 nonsynonymous","R25A C49S Y91S D112N",4
"lib1","SARS-CoV-2","ACAGACAAAGTACATG",1,7.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8H T15N K48Q Q144F",4
"lib1","SARS-CoV-2","ACAGACAACAGATACG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9R R27* C102S C158L",4
"lib1","SARS-CoV-2","ACAGACAAGGAAATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","ACAGACAATCTCCTAG",3,7.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L L57W T63L L183S",4
"lib1","SARS-CoV-2","ACAGACACACATTTTG",1,60.87,8.85,-1.91,0.13,2.64,1.13,0.01,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","ACAGACACGACATATG",6,14.82,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","E10W F99N W106R",3
"lib1","SARS-CoV-2","ACAGACACGAGAGGGC",3,30.33,10.82,0.05,0.06,2.95,1.02,0,"1 nonsynonymous","R16A",1
"lib1","SARS-CoV-2","ACAGACAGTCAATCGA",1,5.27,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V65D R124H K199I",3
"lib1","SARS-CoV-2","ACAGACAGTGAACATC",4,39.45,10.84,0.07,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGACAGTGGACAGG",2,30.19,10.74,-0.02,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGACATAAAAATAA",1,21.91,10.75,-0.02,0.1,2.89,1.07,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACAGACATATAGACGC",10,7.22,NA,NA,NA,NA,NA,NA,"stop","L60* T100S",2
"lib1","SARS-CoV-2","ACAGACATGAGAACAA",1,16.61,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A81M I88V F99L G117S V173M",5
"lib1","SARS-CoV-2","ACAGACCAACAACAAG",4,31.77,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L95F N107L C158T V173Y",4
"lib1","SARS-CoV-2","ACAGACCAATTGAACG",1,11.31,8.71,-2.06,0.37,1.59,1.34,0.07,">1 nonsynonymous","F99L L122Q S139F",3
"lib1","SARS-CoV-2","ACAGACCGACTAGTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","A33T G101A N120C I142*",4
"lib1","SARS-CoV-2","ACAGACCTAACGATGT",5,87.06,9.31,-1.45,0.11,1.74,1.12,0,">1 nonsynonymous","G83K D137V",2
"lib1","SARS-CoV-2","ACAGACCTTTGATCAC",1,47.02,10.82,0.06,0.07,2.91,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGACGAAACTCGCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S E10G Y91D S139T",4
"lib1","SARS-CoV-2","ACAGACGAGACATTTG",5,58.74,10.81,0.05,0.04,2.96,1,0,"1 nonsynonymous","K198D",1
"lib1","SARS-CoV-2","ACAGACGGAAGCCAAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACAGACGGGAACGGAT",9,1.24,NA,NA,NA,NA,NA,NA,"stop","F17W R27* I80Y R127C Y178T",5
"lib1","SARS-CoV-2","ACAGACGTTTATGATA",1,49.02,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","V20D C31I F44K Y93V N171S",5
"lib1","SARS-CoV-2","ACAGACGTTTTAATAA",5,195.42,10.21,-0.56,0.05,2.76,1.02,0,">1 nonsynonymous","T46L Q84Y",2
"lib1","SARS-CoV-2","ACAGACTAAACAACAA",6,39.71,6.22,-4.55,0.72,1.5,1.29,0.02,">1 nonsynonymous","R16P V103M Y119G",3
"lib1","SARS-CoV-2","ACAGACTAAGCACATT",3,82.96,10.01,-0.76,0.08,2.53,1,0,">1 nonsynonymous","V32S V52M K128I",3
"lib1","SARS-CoV-2","ACAGACTAGAATAACC",8,95.95,10.72,-0.04,0.05,2.93,1.03,0,"1 nonsynonymous","R136K",1
"lib1","SARS-CoV-2","ACAGACTGCGCGTATC",11,292.18,10.77,0.01,0.06,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGACTGCGGAAAAC",7,158.56,10.76,0,0.07,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGACTTAAAAACGG",5,33.87,9.66,-1.1,0.12,1.88,1.13,0,">1 nonsynonymous","S29G K56M E141Y E186I",4
"lib1","SARS-CoV-2","ACAGACTTCTAAACAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V37I Y91N S139R Y143* S200H",5
"lib1","SARS-CoV-2","ACAGAGAAATGATGTT",3,17.79,10.85,0.08,0.1,2.93,1.03,0,">1 nonsynonymous","T3A Y39L",2
"lib1","SARS-CoV-2","ACAGAGACCCACCCTA",2,114.03,8.84,-1.92,0.13,2.12,1.17,0.01,">1 nonsynonymous","F62L E76W P96S",3
"lib1","SARS-CoV-2","ACAGAGACGTCGTTGA",9,158.72,10.74,-0.02,0.05,2.92,1.03,0,">1 nonsynonymous","P54S T148A",2
"lib1","SARS-CoV-2","ACAGAGACTTAATCTT",10,134.07,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37R L60Q A81Q F167C",4
"lib1","SARS-CoV-2","ACAGAGATAACACGTG",2,75.39,10.19,-0.58,0.09,2.7,1.02,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","ACAGAGATTGGAATTT",16,180.35,10.76,0,0.05,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGAGATTTCAAGAT",1,34.67,10.53,-0.24,0.2,2.46,1.5,0.01,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","ACAGAGCAAGTTACCC",1,2.72,NA,NA,NA,NA,NA,NA,"stop","I2* A14E W23L S53F",4
"lib1","SARS-CoV-2","ACAGAGCATCAAAAAA",2,49.35,10.82,0.05,0.07,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGAGCCCGCTCACA",2,42.57,9.91,-0.86,0.09,1.89,1.1,0,">1 nonsynonymous","D90G S147L N151L",3
"lib1","SARS-CoV-2","ACAGAGCGATCTATTA",2,64.23,10.16,-0.6,0.1,2.11,1.05,0,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","ACAGAGCTAACAAATT",7,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Q Y178N",2
"lib1","SARS-CoV-2","ACAGAGGACATGTATG",6,16.35,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","Y93T Q168S K198T",3
"lib1","SARS-CoV-2","ACAGAGGAGAGGTACA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","F44* R136Y G155Q",3
"lib1","SARS-CoV-2","ACAGAGGCAACTCAAG",4,5.39,NA,NA,NA,NA,NA,NA,"stop","I28G V52T D90* W106L E135V",5
"lib1","SARS-CoV-2","ACAGAGGCCTCTCACC",5,108.04,10.51,-0.25,0.03,2.91,1.03,0,">1 nonsynonymous","S36P P54K V153N",3
"lib1","SARS-CoV-2","ACAGAGGGTAAGGGTC",6,1.73,NA,NA,NA,NA,NA,NA,"stop","A14* D97T F160I",3
"lib1","SARS-CoV-2","ACAGAGGTTACCTAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89G T170G R179P",3
"lib1","SARS-CoV-2","ACAGAGTATCATCATA",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L R124V Q168G",3
"lib1","SARS-CoV-2","ACAGAGTGAGTTGTGA",5,18.48,10.78,0.02,0.07,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGATAAAAGGATAT",8,140.11,10.53,-0.23,0.05,2.83,1.01,0,">1 nonsynonymous","V103I E141V N171T",3
"lib1","SARS-CoV-2","ACAGATAAAGCAAAAG",1,6.21,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","A14M T140S T148I Y165D",4
"lib1","SARS-CoV-2","ACAGATAAAGGAATTC",4,24.04,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","T55C E76T D90I",3
"lib1","SARS-CoV-2","ACAGATAACCTGTAAA",3,53.52,10.17,-0.59,0.04,2.86,1,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","ACAGATAACGGTATCC",1,77,10.15,-0.62,0.06,2.75,1,0,">1 nonsynonymous","S43V K56P",2
"lib1","SARS-CoV-2","ACAGATAAGACACATC",1,0.1,NA,NA,NA,NA,NA,NA,"stop","E10Y S129* L162R",3
"lib1","SARS-CoV-2","ACAGATAAGGTAAAAT",4,41.43,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N40A G86V R127T",3
"lib1","SARS-CoV-2","ACAGATAATATTACAT",4,5.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34R K94N D98Q A105S A145V",5
"lib1","SARS-CoV-2","ACAGATACAAAAACTA",6,78.91,10.7,-0.06,0.06,2.93,1.04,0,">1 nonsynonymous","S129M K198G",2
"lib1","SARS-CoV-2","ACAGATACATACTGGA",1,0.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","ACAGATACCAGTTATA",2,78.45,10.5,-0.27,0.1,2.91,1.04,0,">1 nonsynonymous","Y35I E141F",2
"lib1","SARS-CoV-2","ACAGATACTGATAGTA",7,131.45,10.5,-0.26,0.04,2.92,1.03,0,">1 nonsynonymous","A33P S139N",2
"lib1","SARS-CoV-2","ACAGATACTTAAAATT",5,17.35,7.46,-3.31,0.48,1.5,1.02,0.08,">1 nonsynonymous","V37G T63L V77E Y159F",4
"lib1","SARS-CoV-2","ACAGATAGTCCAAACA",5,110.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61D R127V P133W L188K",4
"lib1","SARS-CoV-2","ACAGATATAAAAAATT",4,93.17,10.64,-0.13,0.05,2.92,1.03,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","ACAGATATAACTACTA",4,150.47,8.28,-2.49,0.16,2.98,1.04,0.01,">1 nonsynonymous","F126S N151E",2
"lib1","SARS-CoV-2","ACAGATATAATCCTTT",7,396.16,6.08,-4.69,0.63,1.5,1.17,0.01,">1 nonsynonymous","L60Q F126D",2
"lib1","SARS-CoV-2","ACAGATATGAACACAA",4,46.81,6,-4.76,1.14,1.5,1.08,0.02,">1 nonsynonymous","S19Q L60V D68Q Q84K A89T I142S S184E",7
"lib1","SARS-CoV-2","ACAGATATGCAATTAA",5,38.21,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37Y S43L Y66N K87E Y93T N107G L122M P197G",8
"lib1","SARS-CoV-2","ACAGATATGTGCATTC",4,27.85,10.33,-0.43,0.1,2.71,1,0,"1 nonsynonymous","N13S",1
"lib1","SARS-CoV-2","ACAGATCAAACAATCA",6,17.11,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N58M K94C R136F",3
"lib1","SARS-CoV-2","ACAGATCAATTTTAAC",1,5.4,6.04,-4.72,2,1.5,1.29,0.03,">1 nonsynonymous","I2N I80T",2
"lib1","SARS-CoV-2","ACAGATCATATATAAA",1,20.92,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V32P G101H L131P S200R",4
"lib1","SARS-CoV-2","ACAGATCATCACTGAA",12,2.62,NA,NA,NA,NA,NA,NA,"stop","A14W Q176*",2
"lib1","SARS-CoV-2","ACAGATCGGTCTCAAC",2,121.13,10.73,-0.03,0.06,2.9,1.03,0,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","ACAGATCTAATTCTGT",2,0.77,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACAGATCTCTTAAACC",1,6.51,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","S36V K48H G117T L125W G146E",5
"lib1","SARS-CoV-2","ACAGATGAAAAGTAGA",13,70.83,6.03,-4.73,0.96,1.5,1.22,0.02,">1 nonsynonymous","F44D K48W K87N S139I",4
"lib1","SARS-CoV-2","ACAGATGAAGGATAAA",15,295.69,9.8,-0.97,0.04,2.77,1.05,0,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","ACAGATGACTCGAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","R27* S41T Y119W",3
"lib1","SARS-CoV-2","ACAGATGAGCAAGAAC",2,62.39,10.65,-0.11,0.05,2.89,1.03,0,"1 nonsynonymous","F126L",1
"lib1","SARS-CoV-2","ACAGATGAGTTTTAAA",1,14.53,8.58,-2.19,0.17,2.46,1.22,0.01,">1 nonsynonymous","G9T Y119S L162F",3
"lib1","SARS-CoV-2","ACAGATGATAGTTTGT",7,27.02,6,-4.76,1.95,3,1.31,0.01,">1 nonsynonymous","P7G N13L A105K",3
"lib1","SARS-CoV-2","ACAGATGCCCCAAACT",2,29.93,7.94,-2.82,0.23,1.57,1.15,0.02,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","ACAGATGGGAATAATC",7,43.53,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S45M T63P Q176R P191L",4
"lib1","SARS-CoV-2","ACAGATGTGCTTGCTA",1,58.86,9.95,-0.82,0.09,2.38,1.03,0,">1 nonsynonymous","Q163P K199D",2
"lib1","SARS-CoV-2","ACAGATGTTAAAAGAA",6,93.19,10.33,-0.43,0.04,2.85,1.01,0,">1 nonsynonymous","N13H E141D N151F T201M",4
"lib1","SARS-CoV-2","ACAGATGTTTCAAACA",7,11.29,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F12Y L60Y A67F N151D Q168V G174E",6
"lib1","SARS-CoV-2","ACAGATTAAGGAGAAA",12,115.66,10.3,-0.46,0.03,2.88,1.03,0,">1 nonsynonymous","D98Y K128R T148N",3
"lib1","SARS-CoV-2","ACAGATTCCTACAGAC",1,6.4,NA,NA,NA,NA,NA,NA,"stop","I2F G51T D90*",3
"lib1","SARS-CoV-2","ACAGATTCGCTTTAAA",8,38.85,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y35I S41N V71L Y93P N171V P197L",6
"lib1","SARS-CoV-2","ACAGATTCTAATGCCT",7,73.19,9.86,-0.91,0.09,2.82,1.03,0,">1 nonsynonymous","V115M T148I E154L",3
"lib1","SARS-CoV-2","ACAGATTGACGGACAG",4,39.58,6,-4.76,2,2.25,1.08,0,">1 nonsynonymous","F17E N107G D137N",3
"lib1","SARS-CoV-2","ACAGATTGGTTTGCCC",1,38.52,8.46,-2.31,0.28,1.5,1.09,0.04,">1 nonsynonymous","V37W A89D K199I",3
"lib1","SARS-CoV-2","ACAGATTGTTGGAAAT",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107S L162W",2
"lib1","SARS-CoV-2","ACAGATTTCAACATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S43T C49W W106* N120D I138L Y159I",6
"lib1","SARS-CoV-2","ACAGATTTTAGAATTG",4,9.48,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","P7L A14L A33S G101D F134C",5
"lib1","SARS-CoV-2","ACAGATTTTCTAAGCA",6,45.1,10.8,0.03,0.1,2.94,1,0,">1 nonsynonymous","V153S T201K",2
"lib1","SARS-CoV-2","ACAGCAAAAGAAACGC",11,5.12,9.07,-1.7,0.16,2.68,1.38,0.01,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","ACAGCAAAATGAGCTG",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R S41P I72T E186L",4
"lib1","SARS-CoV-2","ACAGCAAACGATCACA",1,69.99,9.67,-1.09,0.09,1.87,1.06,0,">1 nonsynonymous","L38R L60I",2
"lib1","SARS-CoV-2","ACAGCAAACGTAATAA",2,7.63,10.34,-0.43,0.1,3,1.05,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","ACAGCAAACTCCCTTG",1,36.73,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y91L P177R",2
"lib1","SARS-CoV-2","ACAGCAAATCAAAGCC",1,29.01,9.38,-1.38,0.19,1.7,1.1,0.01,">1 nonsynonymous","A14R G51N Y91G S129M T201I",5
"lib1","SARS-CoV-2","ACAGCAACCCAACTTC",2,46.97,6,-4.76,2,2.83,1.19,0.01,">1 nonsynonymous","F62M Y93D",2
"lib1","SARS-CoV-2","ACAGCAAGATGCCGCT",6,101.36,10.23,-0.53,0.05,2.82,1,0,">1 nonsynonymous","D98L N130G",2
"lib1","SARS-CoV-2","ACAGCAAGGTAACCCT",3,46.65,10.75,-0.02,0.1,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGCAAGTAAGCCGA",3,21.84,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35D P96L N110V",3
"lib1","SARS-CoV-2","ACAGCACAAAGCAATG",3,6.25,6.54,-4.23,0.51,1.5,1.08,0.02,">1 nonsynonymous","Y35S F185H",2
"lib1","SARS-CoV-2","ACAGCACCCCCCCCTA",3,31.05,7.09,-3.68,0.3,1.5,1.2,0.03,">1 nonsynonymous","N4D R25S A42V S139H A190L",5
"lib1","SARS-CoV-2","ACAGCACCGTATTACA",3,28.66,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","T55L I80L V103A K132Y",4
"lib1","SARS-CoV-2","ACAGCACGTAATATTT",1,14.31,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","W23S F44L N118Y",3
"lib1","SARS-CoV-2","ACAGCACGTAGCAATC",8,46.95,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9V A105T N157L G166S",4
"lib1","SARS-CoV-2","ACAGCACTTATAAAAA",6,67.09,8.38,-2.39,0.12,2.46,1.05,0,">1 nonsynonymous","T85M Q168K V194L",3
"lib1","SARS-CoV-2","ACAGCACTTCGATACA",5,68.03,8.54,-2.23,0.16,2.48,1.07,0.01,"1 nonsynonymous","Q176G",1
"lib1","SARS-CoV-2","ACAGCACTTTAATTAT",6,2.99,NA,NA,NA,NA,NA,NA,"stop","P7E R16H F62* R73Y V103H T148V",6
"lib1","SARS-CoV-2","ACAGCAGAACACAGAA",1,7.34,9.53,-1.23,0.17,2.28,1.12,0.01,">1 nonsynonymous","T63D T100D",2
"lib1","SARS-CoV-2","ACAGCAGAACAGTACC",1,10.51,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A33E N120P Y143I N151L",4
"lib1","SARS-CoV-2","ACAGCAGATGTTAAGG",1,7.82,9.97,-0.79,0.21,1.99,1,0.02,">1 nonsynonymous","P82A T201N",2
"lib1","SARS-CoV-2","ACAGCAGCTTCGCCAC",1,5.44,8.98,-1.79,0.15,2.86,1.13,0.01,">1 nonsynonymous","V37N K87S L125R",3
"lib1","SARS-CoV-2","ACAGCAGGGAATATAA",4,40.19,8.38,-2.39,0.11,2.11,1.08,0,">1 nonsynonymous","K56L A89Y L125T L131I",4
"lib1","SARS-CoV-2","ACAGCATAAACTCCCG",4,29.43,10.84,0.08,0.06,2.99,1,0,">1 nonsynonymous","T15S Q163S",2
"lib1","SARS-CoV-2","ACAGCATAACAACCAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P54* I72R G152N Y165G",4
"lib1","SARS-CoV-2","ACAGCATAACCTTACA",4,11.17,10.27,-0.5,0.18,3,1.02,0.01,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","ACAGCATAAGAAACAT",5,86.74,9.79,-0.97,0.06,2.71,1.06,0,">1 nonsynonymous","C6L V115I",2
"lib1","SARS-CoV-2","ACAGCATAATTAAGCA",5,31.1,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","G86F D98A V103S L122M I142D",5
"lib1","SARS-CoV-2","ACAGCATCAGCGTGGC",3,31.84,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","ACAGCATGACTTTTCA",8,97.38,10.61,-0.15,0.04,2.93,1.03,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","ACAGCATGTACCATAC",1,9.23,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","S69V F99I S139I N157F F167L",5
"lib1","SARS-CoV-2","ACAGCATTATAAAGGA",12,71.41,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K94L N118I T170A K199M",4
"lib1","SARS-CoV-2","ACAGCCAAATAATATG",2,25.09,6.22,-4.54,0.79,1.5,1.09,0.03,">1 nonsynonymous","N1Y K56M V77M R127S P161T",5
"lib1","SARS-CoV-2","ACAGCCAACATGTAAA",3,32.23,8.08,-2.69,0.21,2.1,1.18,0.01,">1 nonsynonymous","N110C Y123W Y159L",3
"lib1","SARS-CoV-2","ACAGCCAACGATTCCG",1,16.77,6,-4.76,0.92,1.5,1.1,0,">1 nonsynonymous","P82Y K87W A105S",3
"lib1","SARS-CoV-2","ACAGCCAACGGCTACC",7,33.57,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55L N107T Q144L",3
"lib1","SARS-CoV-2","ACAGCCACTATAACAT",3,55.23,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G86A L95M F99M",3
"lib1","SARS-CoV-2","ACAGCCAGTTTAGCCT",4,22.67,9.87,-0.89,0.25,1.71,1.09,0.03,">1 nonsynonymous","S45F Q84L",2
"lib1","SARS-CoV-2","ACAGCCATGAGCCCTT",2,48,6,-4.76,0.98,1.5,1.14,0.01,">1 nonsynonymous","L5K S45R L122W Y143R Y165P S200M",6
"lib1","SARS-CoV-2","ACAGCCATTGTATCCA",9,1.57,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","ACAGCCCAATTAAAAG",1,49.02,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I138C L162G",2
"lib1","SARS-CoV-2","ACAGCCCACACTTCTG",1,72.49,10.63,-0.13,0.04,2.97,1.01,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","ACAGCCCATTATTTGG",2,17.14,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V77D P82G D112K Y175M",4
"lib1","SARS-CoV-2","ACAGCCCCCATTTCCA",6,55.38,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","A33T C49G V115L",3
"lib1","SARS-CoV-2","ACAGCCCCCGAAACGG",4,0,NA,NA,NA,NA,NA,NA,"stop","T3* F99K R124L I142P",4
"lib1","SARS-CoV-2","ACAGCCCCGTTAACGG",2,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S I88Y Y93A",3
"lib1","SARS-CoV-2","ACAGCCCTTACAGAGA",6,32.24,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9A T63S P96K A105L G155S V173D",6
"lib1","SARS-CoV-2","ACAGCCGAAAAAGAAA",1,10.14,10.59,-0.17,0.1,2.95,1.05,0,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","ACAGCCGGTATCTGTT",6,18.61,7.28,-3.49,0.34,1.55,1.17,0.02,">1 nonsynonymous","S45N D98Y D112I",3
"lib1","SARS-CoV-2","ACAGCCGTAAAGAATT",3,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C F62G D98A N109R",4
"lib1","SARS-CoV-2","ACAGCCGTTCAGTCAT",4,70.82,9.95,-0.82,0.09,2.17,1.03,0,">1 nonsynonymous","V37G R136Y E154K",3
"lib1","SARS-CoV-2","ACAGCCTAAAAAGCGG",3,27.88,10.69,-0.07,0.06,2.85,1.09,0,"1 nonsynonymous","A33Y",1
"lib1","SARS-CoV-2","ACAGCCTAATGCGTTG",1,13.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A Y93L",2
"lib1","SARS-CoV-2","ACAGCCTCACATCAAT",3,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S41Y Y119C R127K Q163S",5
"lib1","SARS-CoV-2","ACAGCCTGAACACAAA",5,1.3,NA,NA,NA,NA,NA,NA,"stop","P96C N110Q P133* Y178F",4
"lib1","SARS-CoV-2","ACAGCGAAAACTAAAA",9,139.41,10.67,-0.1,0.05,2.93,1.03,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","ACAGCGACCTATTCCT",3,9.91,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V37L G51R Q79R L122Y P149K T170L A190S",7
"lib1","SARS-CoV-2","ACAGCGACTAACTTTA",2,45.87,10.31,-0.45,0.05,2.86,1,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","ACAGCGAGAATTGGAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R D90L D98C",3
"lib1","SARS-CoV-2","ACAGCGAGACCAATTT",3,41.98,9.14,-1.63,0.23,1.72,1.14,0.02,">1 nonsynonymous","F17W S41W D68M",3
"lib1","SARS-CoV-2","ACAGCGAGATTTTCAG",1,31.46,10.68,-0.08,0.09,2.93,1.06,0,">1 nonsynonymous","L122G T140S",2
"lib1","SARS-CoV-2","ACAGCGAGCAATCTGT",1,5.57,10.89,0.13,0.12,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGCGAGCTAATTAC",12,240.47,10.27,-0.49,0.04,2.81,1.01,0,">1 nonsynonymous","D59C Y66L",2
"lib1","SARS-CoV-2","ACAGCGATACCTCCTA",4,19.96,9.54,-1.23,0.27,1.73,1.09,0.03,">1 nonsynonymous","N13C D34W A42R S108A",4
"lib1","SARS-CoV-2","ACAGCGATTAGTGATA",2,66.05,10.7,-0.07,0.04,2.94,1.02,0,">1 nonsynonymous","Q84I T201V",2
"lib1","SARS-CoV-2","ACAGCGATTCTTTTAC",2,64.44,10.61,-0.16,0.06,2.84,1.04,0,"1 nonsynonymous","K132W",1
"lib1","SARS-CoV-2","ACAGCGCAAGTGAAAA",6,21.02,9.13,-1.63,0.39,1.5,1,0.07,">1 nonsynonymous","A42V F62L T85M K114W S184N",5
"lib1","SARS-CoV-2","ACAGCGCAATAAACAG",1,9.92,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","Y119E R127Y",2
"lib1","SARS-CoV-2","ACAGCGCCCGTTGCGT",7,1.27,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib1","SARS-CoV-2","ACAGCGCCTCGCACAC",1,7.38,10.73,-0.04,0.35,2.74,1.01,0.03,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","ACAGCGTAAAAATTTG",8,166.2,10.05,-0.72,0.03,2.92,1.01,0,">1 nonsynonymous","T140V Q163E K198T",3
"lib1","SARS-CoV-2","ACAGCGTAAGCATCAT",2,11.7,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R124N E154R G172E",3
"lib1","SARS-CoV-2","ACAGCGTGAACCCGGA",1,26.58,9.65,-1.12,0.1,1.71,1.14,0.01,">1 nonsynonymous","K56L N64F E135I",3
"lib1","SARS-CoV-2","ACAGCGTGCCTCTAAC",2,24.26,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","Y91T Y123R P149N",3
"lib1","SARS-CoV-2","ACAGCGTGGGCAAACA",2,1.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6A",1
"lib1","SARS-CoV-2","ACAGCTAAATCAAGAG",7,99.7,10.33,-0.43,0.06,2.84,1.04,0,">1 nonsynonymous","F8L I138G G196W",3
"lib1","SARS-CoV-2","ACAGCTAACAATAGCC",2,18.76,6,-4.76,2,3,1.17,0,">1 nonsynonymous","L57D N92L Y119V K198D",4
"lib1","SARS-CoV-2","ACAGCTAATAAATTAT",12,114.82,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45P F167P",2
"lib1","SARS-CoV-2","ACAGCTAATCAAAAGT",2,19.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19W R78H K132A",3
"lib1","SARS-CoV-2","ACAGCTACTAAGGGCG",1,33.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V65T S113D Y159S",3
"lib1","SARS-CoV-2","ACAGCTACTCATCAAG",4,0,NA,NA,NA,NA,NA,NA,"stop","T63V V103K R136* L188N",4
"lib1","SARS-CoV-2","ACAGCTAGATATGTCC",7,0.54,NA,NA,NA,NA,NA,NA,"stop","T63D T100* E141*",3
"lib1","SARS-CoV-2","ACAGCTAGATGGACAG",5,77.52,10.84,0.08,0.07,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACAGCTAGTAGGTTCG",2,30.33,6.18,-4.59,1.17,1.5,1.32,0.03,">1 nonsynonymous","S19R G83L S164Y",3
"lib1","SARS-CoV-2","ACAGCTAGTGGATAAG",3,17.42,7.83,-2.94,0.32,1.5,1.14,0.04,">1 nonsynonymous","T3S G86L T201N",3
"lib1","SARS-CoV-2","ACAGCTATTATAGCAC",5,129.36,9.49,-1.27,0.06,2.74,1.11,0,">1 nonsynonymous","S19D G116K",2
"lib1","SARS-CoV-2","ACAGCTATTCCTGACT",1,51.36,10.75,-0.02,0.1,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGCTCACATTTAAC",2,41.68,9.99,-0.78,0.14,2.2,1.05,0.01,">1 nonsynonymous","I2L N64S C102V",3
"lib1","SARS-CoV-2","ACAGCTCTAAATTTCG",14,101.21,10.29,-0.47,0.05,2.81,1.01,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","ACAGCTGACAAGGAAT",3,1.79,NA,NA,NA,NA,NA,NA,"stop","K48N P133*",2
"lib1","SARS-CoV-2","ACAGCTGCATTTCGGT",2,64.09,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","V71L K94G F134V P161A",4
"lib1","SARS-CoV-2","ACAGCTTAAAAATGAC",4,82.5,10.75,-0.01,0.03,2.93,1.01,0,">1 nonsynonymous","G83R I104L",2
"lib1","SARS-CoV-2","ACAGCTTAGACACGTT",14,452.95,8.36,-2.4,0.11,2.5,1.09,0.01,">1 nonsynonymous","Y119F N157G",2
"lib1","SARS-CoV-2","ACAGCTTCACATATAT",15,87.03,8.22,-2.55,0.27,1.5,1.07,0.03,">1 nonsynonymous","K56R A105R S184G",3
"lib1","SARS-CoV-2","ACAGCTTCCCTAATCA",2,20.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S S69R T140Y E154H",4
"lib1","SARS-CoV-2","ACAGCTTCTCATAATA",6,58.27,10.84,0.08,0.08,2.92,1.04,0,">1 nonsynonymous","D97H L122R",2
"lib1","SARS-CoV-2","ACAGCTTCTTAAGAAC",1,7.85,7.78,-2.99,0.27,1.5,1.05,0.02,">1 nonsynonymous","A81Q R127L T201H",3
"lib1","SARS-CoV-2","ACAGCTTGACGCGGCT",5,128.17,8.62,-2.14,0.11,2.65,1.13,0,">1 nonsynonymous","S113L L122R P149N",3
"lib1","SARS-CoV-2","ACAGCTTTAAAAATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* A81V G101I N130L",4
"lib1","SARS-CoV-2","ACAGGAAAAACACGAA",2,0.94,NA,NA,NA,NA,NA,NA,"stop","F62L G83S Y143*",3
"lib1","SARS-CoV-2","ACAGGAAAATGATAGG",4,34.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F62L F99K P161Y",3
"lib1","SARS-CoV-2","ACAGGAAACCTCTAAC",3,72.2,10.5,-0.26,0.03,2.86,1.07,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","ACAGGAAATTAAGGGT",2,4.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","ACAGGAACAACTAGAG",5,67.43,10.13,-0.64,0.07,2.7,1.03,0,">1 nonsynonymous","C6Y N130I",2
"lib1","SARS-CoV-2","ACAGGAACATATCGCA",2,9.42,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","F8Q I80C D98E P133G P149R",5
"lib1","SARS-CoV-2","ACAGGAACATCCCATT",4,168.48,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37K G86L Y121K Q176W",4
"lib1","SARS-CoV-2","ACAGGAACTATTGAAG",4,89.08,10,-0.76,0.08,2.4,1.06,0,">1 nonsynonymous","D90R S113A L122G I138M S184H",5
"lib1","SARS-CoV-2","ACAGGAAGCAGCCACT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3*",1
"lib1","SARS-CoV-2","ACAGGAAGTAAGTTGA",3,37.04,9.51,-1.26,0.16,1.64,1.16,0.01,">1 nonsynonymous","Y39I Y91S K128L",3
"lib1","SARS-CoV-2","ACAGGAATAATGCACC",4,64.55,10.77,0,0.06,2.9,1.05,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","ACAGGAATGAATGACA",3,53.61,10.68,-0.09,0.06,2.87,1.05,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","ACAGGACACAATATAA",2,0.8,NA,NA,NA,NA,NA,NA,"stop","C61N D90M W106* S139I A190S",5
"lib1","SARS-CoV-2","ACAGGACCATCGCCAT",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D A105R G117L V182T",4
"lib1","SARS-CoV-2","ACAGGACCTCAGGACA",7,124.89,10.23,-0.53,0.08,2.71,1.04,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","ACAGGACGCCGTACAA",6,93.14,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A14Y N107L P149Q P197T",4
"lib1","SARS-CoV-2","ACAGGACGGATTCCTT",1,27.45,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R25S N64P N107I Y119V",4
"lib1","SARS-CoV-2","ACAGGACGTAATCCAC",5,97.67,10.66,-0.1,0.04,2.9,1.06,0,">1 nonsynonymous","N4P N110Q",2
"lib1","SARS-CoV-2","ACAGGACTTAAGATGC",3,23.95,6.19,-4.58,0.57,1.5,1.07,0.02,">1 nonsynonymous","A33G G51S S53Q I72R V115S",5
"lib1","SARS-CoV-2","ACAGGACTTATCTTAG",5,73.62,10.63,-0.13,0.06,2.84,1.07,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","ACAGGAGAATTTACAG",8,0.02,NA,NA,NA,NA,NA,NA,"stop","C61S Q79* Y143A F160M",4
"lib1","SARS-CoV-2","ACAGGAGTACAAGACT",4,49.73,10.91,0.14,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGGATACTCTTAAA",6,16.56,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S45N A81T D90T Y119T T140K P149N",6
"lib1","SARS-CoV-2","ACAGGATCAATTTAAG",13,107.18,6,-4.76,0.62,1.5,1.14,0.01,">1 nonsynonymous","L38Y W106A K128Q Y143T",4
"lib1","SARS-CoV-2","ACAGGATCCCACATTA",3,25.56,7.3,-3.46,0.38,1.5,1.06,0.03,">1 nonsynonymous","A89I Y175S",2
"lib1","SARS-CoV-2","ACAGGATGCGAACGAA",2,9.74,6.93,-3.84,0.47,1.5,1,0.06,">1 nonsynonymous","T85M V103F V115A S129R P149C R179C",6
"lib1","SARS-CoV-2","ACAGGATTAACTAATA",9,27.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L60Y C102R",2
"lib1","SARS-CoV-2","ACAGGATTACATATAG",5,22.13,6.99,-3.78,0.38,1.5,1.12,0.03,">1 nonsynonymous","A42E N120W R127L",3
"lib1","SARS-CoV-2","ACAGGCAAAACAGAAA",14,280.25,10.72,-0.04,0.03,2.93,1.04,0,"1 nonsynonymous","N1I",1
"lib1","SARS-CoV-2","ACAGGCAGAGAGACAT",2,12.8,6.15,-4.62,1.52,1.5,1.22,0.03,">1 nonsynonymous","A67Y P96T S147L",3
"lib1","SARS-CoV-2","ACAGGCAGCTACGACA",2,0.43,NA,NA,NA,NA,NA,NA,"stop","S53* L131M P149I G155A",4
"lib1","SARS-CoV-2","ACAGGCATTCCATAAG",1,12.71,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","D34P I88V G116H I138R G146C G152M",6
"lib1","SARS-CoV-2","ACAGGCCAAACCCCTA",1,40.25,10.08,-0.69,0.09,2.49,1.09,0,">1 nonsynonymous","V52A E141I T201L",3
"lib1","SARS-CoV-2","ACAGGCCAATGTTTCA",4,82.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K56R N92L T100N G155F",4
"lib1","SARS-CoV-2","ACAGGCCACCTAAAAA",1,14.66,9.44,-1.32,0.17,1.95,1.01,0.01,">1 nonsynonymous","N107V N120S",2
"lib1","SARS-CoV-2","ACAGGCCCCCGCACTG",6,22.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V N13I I104P",3
"lib1","SARS-CoV-2","ACAGGCCCGTAGGCAA",1,7.22,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N13L F70L",2
"lib1","SARS-CoV-2","ACAGGCCCTATAAATT",6,34.88,10.11,-0.66,0.18,1.84,1.11,0.01,">1 nonsynonymous","V37F P82A D98R L122G",4
"lib1","SARS-CoV-2","ACAGGCCTATTCCATC",3,51.09,6.32,-4.44,0.58,1.5,1.17,0.02,">1 nonsynonymous","L60F G86V E141R P177R",4
"lib1","SARS-CoV-2","ACAGGCGAACAACAAA",1,5.06,10.64,-0.13,0.11,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGGCGAAGTTCAAT",2,15.73,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A42V G86I G155L",3
"lib1","SARS-CoV-2","ACAGGCGGCACTCCAA",1,47.31,9.92,-0.85,0.05,2.92,1.02,0,">1 nonsynonymous","Y35L G74S",2
"lib1","SARS-CoV-2","ACAGGCGGGCTGCCAG",2,17.55,6,-4.76,2,1.81,1.24,0.04,">1 nonsynonymous","A42E P54V D137K L187S G196K",5
"lib1","SARS-CoV-2","ACAGGCTAAGTGAGTG",3,20.05,9.91,-0.86,0.25,1.86,1.06,0.03,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","ACAGGCTCTGAATAAT",6,0.18,NA,NA,NA,NA,NA,NA,"stop","L5G Y119* G146V",3
"lib1","SARS-CoV-2","ACAGGCTGAGAACGTG",9,2.97,NA,NA,NA,NA,NA,NA,"stop","F12P D34A S43L N58T V77P Y91* I104L P161N",8
"lib1","SARS-CoV-2","ACAGGCTGCCAATCAA",1,2.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","ACAGGCTGGGTTGACT",1,12.17,9.96,-0.81,0.16,2.72,1.09,0.02,">1 nonsynonymous","I28M G51H N118V N130P",4
"lib1","SARS-CoV-2","ACAGGGAACTAATGCA",7,47.81,6,-4.76,2,1.5,1.14,0.02,"1 nonsynonymous","L95E",1
"lib1","SARS-CoV-2","ACAGGGACAAAAGACC",2,27.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N C61S I80A",3
"lib1","SARS-CoV-2","ACAGGGACATTGCTGG",2,64.1,10.83,0.06,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGGGACGCTATCAT",1,30.15,9.22,-1.55,0.16,1.6,1.12,0.01,"1 nonsynonymous","P82R",1
"lib1","SARS-CoV-2","ACAGGGACTTTACTAG",11,97.68,8.37,-2.39,0.35,1.5,1,0.07,">1 nonsynonymous","N13Q F44Y K56L F167V Q176P",5
"lib1","SARS-CoV-2","ACAGGGCATGATAACT",3,58.16,10.49,-0.28,0.05,2.94,1.01,0,">1 nonsynonymous","T46M A105S E154Q",3
"lib1","SARS-CoV-2","ACAGGGGATGGAATAC",1,25.97,6.14,-4.62,0.76,1.5,1.11,0.02,">1 nonsynonymous","Y39L D137Y G166L",3
"lib1","SARS-CoV-2","ACAGGGGTAAGACGTG",5,15.86,6,-4.76,2,3,1.06,0,">1 nonsynonymous","V77Q P96V",2
"lib1","SARS-CoV-2","ACAGGGTCTCAATACA",3,23.35,10.31,-0.46,0.1,2.89,1.02,0,">1 nonsynonymous","L5V S29L D59T Q168A",4
"lib1","SARS-CoV-2","ACAGGGTGATCAAGCC",2,43.13,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37D D68N P149L C158S",4
"lib1","SARS-CoV-2","ACAGGGTGTCGAGGCT",1,9.07,9.43,-1.34,0.12,2.95,1.08,0,">1 nonsynonymous","S36L K87M Q168T",3
"lib1","SARS-CoV-2","ACAGGGTTCTAGTATG",5,30.35,6,-4.76,1.31,1.5,1.1,0.01,">1 nonsynonymous","N58T Y91S V180T",3
"lib1","SARS-CoV-2","ACAGGTAAAACCCTCT",6,5.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34L F99L",2
"lib1","SARS-CoV-2","ACAGGTAAAAGTTCAA",2,71.28,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","L95G C102Y N107S L122E",4
"lib1","SARS-CoV-2","ACAGGTAACGAATCTA",3,179.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G172M C195L T201A",3
"lib1","SARS-CoV-2","ACAGGTAACTAACTTA",5,22.37,8.58,-2.19,0.2,1.61,1.06,0.01,">1 nonsynonymous","C31A R127S",2
"lib1","SARS-CoV-2","ACAGGTAAGAATCAAA",5,19.24,9.4,-1.36,0.29,1.52,1.18,0.04,">1 nonsynonymous","S69E Y91F D97V",3
"lib1","SARS-CoV-2","ACAGGTACACGCCTTA",11,926.78,9.51,-1.26,0.06,2.84,1.05,0,">1 nonsynonymous","V37T F156C E186D",3
"lib1","SARS-CoV-2","ACAGGTACTATTTGTT",2,24.77,10.76,-0.01,0.13,2.98,1,0.01,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","ACAGGTACTGAAAGCT",4,44.43,10.05,-0.72,0.1,2.58,1.01,0,">1 nonsynonymous","G51L C61V",2
"lib1","SARS-CoV-2","ACAGGTATCGACACAG",2,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49E Y143K P197L",3
"lib1","SARS-CoV-2","ACAGGTATTTCCGCCA",3,38.58,10.65,-0.11,0.07,2.9,1.04,0,">1 nonsynonymous","C61Q T201Y",2
"lib1","SARS-CoV-2","ACAGGTCAACATAACT",1,25.27,9.73,-1.03,0.24,1.76,1.11,0.02,">1 nonsynonymous","A33T D98H Y123I",3
"lib1","SARS-CoV-2","ACAGGTCTAACGTGAA",4,93.99,10.69,-0.07,0.08,2.88,1.09,0,"1 nonsynonymous","S36K",1
"lib1","SARS-CoV-2","ACAGGTCTTAACCAAT",4,34.34,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6P C31Y T85L G101C R124L",5
"lib1","SARS-CoV-2","ACAGGTCTTACGGTAG",6,87.9,10.22,-0.54,0.04,2.82,1.03,0,">1 nonsynonymous","D90N I104T",2
"lib1","SARS-CoV-2","ACAGGTGCCACATTAA",2,30.67,10.86,0.1,0.15,2.72,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACAGGTGGTGAACACA",2,42.44,9.22,-1.54,0.14,1.75,1.09,0.01,">1 nonsynonymous","R25L D68M",2
"lib1","SARS-CoV-2","ACAGGTTAAGTATTAC",3,67.18,7.83,-2.93,0.23,1.5,1.12,0.02,">1 nonsynonymous","I2C K48A T55S D90T D98F",5
"lib1","SARS-CoV-2","ACAGGTTCAACAATGA",3,23.77,10.76,0,0.11,2.91,1,0.01,">1 nonsynonymous","T3H K114F",2
"lib1","SARS-CoV-2","ACAGGTTCACCCACAA",8,172.65,10.7,-0.07,0.04,2.91,1.04,0,">1 nonsynonymous","I2T A33F G146S S164A",4
"lib1","SARS-CoV-2","ACAGGTTCGTATTTCG",3,32.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G K48P",2
"lib1","SARS-CoV-2","ACAGTAAAACCACAAG",2,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Q G166H",2
"lib1","SARS-CoV-2","ACAGTAAAATAAATTT",7,0.59,NA,NA,NA,NA,NA,NA,"stop","A42P K94* K128L",3
"lib1","SARS-CoV-2","ACAGTAAACCGAGTCA",5,107.9,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","P7R L57S T100S Y175C",4
"lib1","SARS-CoV-2","ACAGTAAACGCCTTTC",5,177.41,10.16,-0.61,0.06,2.78,1,0,">1 nonsynonymous","A22T Y39E T63Q",3
"lib1","SARS-CoV-2","ACAGTAAAGAATTCTA",2,45.66,10.62,-0.14,0.07,2.95,1.01,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","ACAGTAAATGAAGACC",3,0,NA,NA,NA,NA,NA,NA,"stop","I80Q D98T L183*",3
"lib1","SARS-CoV-2","ACAGTAAATTGTTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","T55W C61V S129* Y159L",4
"lib1","SARS-CoV-2","ACAGTAACAAACATCT",2,54.32,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","D112L R127E",2
"lib1","SARS-CoV-2","ACAGTAACAATGTTAA",4,39.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M K87T F167M",3
"lib1","SARS-CoV-2","ACAGTAACCGCGAAAT",2,31.9,10.64,-0.13,0.1,2.98,1.02,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACAGTAACGACTATGC",2,32.99,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R124C N157C",2
"lib1","SARS-CoV-2","ACAGTAACGGTATACC",2,16.02,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51Q C61P G74W V77S G174T",5
"lib1","SARS-CoV-2","ACAGTAACTATGTACG",4,6.11,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","N107L I142K",2
"lib1","SARS-CoV-2","ACAGTAACTCAAAGGC",6,66.84,6,-4.76,2,1.5,1.21,0.03,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","ACAGTAAGATAGAGTT",5,21.78,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F12L C49L Y66G",3
"lib1","SARS-CoV-2","ACAGTAAGTTGTAGAC",1,72.8,8.77,-1.99,0.08,2.91,1.06,0,"1 nonsynonymous","A145D",1
"lib1","SARS-CoV-2","ACAGTAATGAGATGGC",5,38.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8K T15S S29L G86E I104F G166S",6
"lib1","SARS-CoV-2","ACAGTACAAATATACC",1,7.71,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R16S N58T G86Q D90L I104G Y123I",6
"lib1","SARS-CoV-2","ACAGTACAACTGGTCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S G51A N92E F160S G166S",5
"lib1","SARS-CoV-2","ACAGTACAAGCCCCAA",1,25.35,9.65,-1.11,0.19,1.78,1.13,0.01,">1 nonsynonymous","R25L D68M",2
"lib1","SARS-CoV-2","ACAGTACAGCAGTAGT",4,10.68,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N24D C49H Y123E",3
"lib1","SARS-CoV-2","ACAGTACCAACAAAGA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E I28H G86R T201A",4
"lib1","SARS-CoV-2","ACAGTACCATATTCTC",3,54.88,10.13,-0.64,0.07,2.7,1.11,0,">1 nonsynonymous","F62E V173N",2
"lib1","SARS-CoV-2","ACAGTACCCAAGTGCC",6,35.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133S S184P",2
"lib1","SARS-CoV-2","ACAGTACCCAGCGATT",6,15.23,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N1M T100Y D112G",3
"lib1","SARS-CoV-2","ACAGTACCTTTACAGA",10,78.58,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I2N S69K F99Y N120L G155W",5
"lib1","SARS-CoV-2","ACAGTACCTTTCTTAT",2,10.05,7.45,-3.32,0.52,1.5,1.08,0.06,">1 nonsynonymous","R127I Q144P T170F",3
"lib1","SARS-CoV-2","ACAGTACGACGCTGCT",2,16.93,10.7,-0.06,0.1,2.78,1.13,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","ACAGTACTGAAAGATT",6,15.12,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","S41H K56G Y91L N107H E141Y T201L",6
"lib1","SARS-CoV-2","ACAGTACTGCCTACCA",7,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99G V153I",2
"lib1","SARS-CoV-2","ACAGTACTTACTGGAA",3,1.72,NA,NA,NA,NA,NA,NA,"stop","E10Q Q79* E135T F167I",4
"lib1","SARS-CoV-2","ACAGTAGAAACACAAA",1,14.1,9.7,-1.07,0.04,2.85,1.03,0,">1 nonsynonymous","R27V S43N W106R",3
"lib1","SARS-CoV-2","ACAGTAGAGGCGGATA",1,16.47,9.98,-0.78,0.12,1.96,1.04,0.01,"1 nonsynonymous","A14W",1
"lib1","SARS-CoV-2","ACAGTAGCAAATACAC",6,1.37,NA,NA,NA,NA,NA,NA,"stop","N13S S19* A42T N171M Q176*",5
"lib1","SARS-CoV-2","ACAGTAGCAATGACAC",4,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M G83L L95R W106M Y119M E141D",6
"lib1","SARS-CoV-2","ACAGTAGTACTACTGA",2,81.04,9.72,-1.05,0.04,2.9,1.05,0,"1 nonsynonymous","N109T",1
"lib1","SARS-CoV-2","ACAGTAGTAGTTCTGT",3,1.23,NA,NA,NA,NA,NA,NA,"stop","I2P Y39* I88G N120V V182L",5
"lib1","SARS-CoV-2","ACAGTATACAATCAGA",3,8.91,10.65,-0.11,0.1,3,1.03,0,">1 nonsynonymous","P149D T201S",2
"lib1","SARS-CoV-2","ACAGTATACCTTCTTT",2,40.25,8.58,-2.18,0.07,2.48,1.14,0,">1 nonsynonymous","D112M P197K",2
"lib1","SARS-CoV-2","ACAGTATCAATGAATC",3,42.92,7.46,-3.31,0.52,1.5,1.06,0.08,">1 nonsynonymous","E76C K94A N171K",3
"lib1","SARS-CoV-2","ACAGTATGAATACCAC",1,7.26,10.5,-0.27,0.08,2.89,1.09,0,">1 nonsynonymous","K48R V115T",2
"lib1","SARS-CoV-2","ACAGTATGGAACCTCA",2,14.31,10.14,-0.63,0.11,2.72,1.14,0.01,">1 nonsynonymous","L60Q Y91M T148D",3
"lib1","SARS-CoV-2","ACAGTATGGCAAGCCG",7,135.1,6.49,-4.27,0.4,1.5,1.18,0.02,">1 nonsynonymous","L5R S41R Q176I",3
"lib1","SARS-CoV-2","ACAGTATGGGCCCACT",2,18.99,10.77,0.01,0.05,2.96,1.01,0,">1 nonsynonymous","S41N F62V D98E",3
"lib1","SARS-CoV-2","ACAGTATTACAGTGGT",7,29.53,6,-4.76,2,2.92,1.1,0,">1 nonsynonymous","P82F G101C V181C K198T",4
"lib1","SARS-CoV-2","ACAGTATTCTAAAATC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","N1G T85E Y123L Y175*",4
"lib1","SARS-CoV-2","ACAGTATTCTCACAAG",8,87.42,8.63,-2.14,0.17,1.5,1.15,0.01,">1 nonsynonymous","C61W K94V",2
"lib1","SARS-CoV-2","ACAGTATTGATAACAT",1,18.25,8.63,-2.13,0.31,1.51,1.1,0.03,">1 nonsynonymous","E10I V20S N171H T201Y",4
"lib1","SARS-CoV-2","ACAGTATTTCCTAGTA",3,42.1,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I2V V52D R73T Y119V L131N S147R C150S",7
"lib1","SARS-CoV-2","ACAGTCAACTCAGAGT",2,12.49,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L60I V77R N92K G101D Q163L",5
"lib1","SARS-CoV-2","ACAGTCAAGACATATC",2,35.52,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T100E K114S Y121G A145T",4
"lib1","SARS-CoV-2","ACAGTCACTATGGTTT",5,72.12,8.67,-2.09,0.09,2.79,1.06,0,">1 nonsynonymous","T85D G117M",2
"lib1","SARS-CoV-2","ACAGTCAGCACATAAG",4,32.85,10.55,-0.21,0.1,2.95,1.02,0,"1 nonsynonymous","V153W",1
"lib1","SARS-CoV-2","ACAGTCAGCCTTATAA",2,53.45,10.86,0.1,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGTCATACCACATT",2,45.85,10.58,-0.18,0.07,2.96,1,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","ACAGTCATATTGTATA",7,176.03,9.23,-1.53,0.07,2.79,1.12,0,">1 nonsynonymous","N30A Y119A E154A",3
"lib1","SARS-CoV-2","ACAGTCATGCTCTGTT",8,77.83,8.65,-2.11,0.09,2.81,1.06,0,">1 nonsynonymous","T3M L125H Y143I",3
"lib1","SARS-CoV-2","ACAGTCATGGATCTTA",1,41.2,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","F47N D98F",2
"lib1","SARS-CoV-2","ACAGTCATTAACATAT",4,87.29,8.63,-2.13,0.14,2.55,1.1,0.01,">1 nonsynonymous","I2V Y119V S139M",3
"lib1","SARS-CoV-2","ACAGTCATTATATTCC",3,66.26,10.4,-0.36,0.04,2.94,1,0,">1 nonsynonymous","N107P P191H",2
"lib1","SARS-CoV-2","ACAGTCATTCAACCAA",9,80.8,6,-4.76,1.89,1.5,1.15,0.01,">1 nonsynonymous","G9R S29E G86R Y91W",4
"lib1","SARS-CoV-2","ACAGTCCATTTGCCAA",8,2.36,NA,NA,NA,NA,NA,NA,"stop","R16M C31P P54* V115K",4
"lib1","SARS-CoV-2","ACAGTCCCCCACGGGG",4,0.33,NA,NA,NA,NA,NA,NA,"stop","L60E P177*",2
"lib1","SARS-CoV-2","ACAGTCCGACATTTGT",3,0.41,NA,NA,NA,NA,NA,NA,"stop","A33K G86K A105G P161*",4
"lib1","SARS-CoV-2","ACAGTCCGGATCCACG",5,66.67,8.27,-2.49,0.2,1.59,1.17,0.02,">1 nonsynonymous","V32P D90R G146D",3
"lib1","SARS-CoV-2","ACAGTCCGGTCTCTGC",5,32.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23V L57V",2
"lib1","SARS-CoV-2","ACAGTCCGTAAACTAC",7,107.36,10.7,-0.07,0.05,2.88,1.04,0,"1 nonsynonymous","V65F",1
"lib1","SARS-CoV-2","ACAGTCCTAAACACTA",10,103.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37L G83I G101M N120I P149S G152A T201G",7
"lib1","SARS-CoV-2","ACAGTCCTCGCTATCC",5,23.15,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G51Y I88L",2
"lib1","SARS-CoV-2","ACAGTCCTGTACAGTC",3,5.1,6.85,-3.92,0.45,2.49,1.23,0.02,">1 nonsynonymous","N13A L95A",2
"lib1","SARS-CoV-2","ACAGTCGAGATCATAA",2,102.65,8.67,-2.09,0.09,3,1.05,0,">1 nonsynonymous","Y119H T170M",2
"lib1","SARS-CoV-2","ACAGTCTATAAGCCAA",1,14.34,8.95,-1.81,0.24,1.54,1.07,0.03,">1 nonsynonymous","F8E C61A Y119K",3
"lib1","SARS-CoV-2","ACAGTCTCCCTGATGG",2,64.24,9.29,-1.48,0.11,2.46,1.1,0,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","ACAGTCTCCGCCAACT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","S29* L57M Y123V S184T T201G",5
"lib1","SARS-CoV-2","ACAGTCTCTACTAATT",3,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E G86Y F99P",3
"lib1","SARS-CoV-2","ACAGTCTGGACGATTT",18,125.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Q A89L",2
"lib1","SARS-CoV-2","ACAGTGAAACTACACG",4,23.51,8.3,-2.46,0.16,1.5,1.05,0.01,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","ACAGTGAAAGAATGTG",10,57.92,6,-4.76,1.63,1.5,1.14,0.01,">1 nonsynonymous","A14D T15V W23G",3
"lib1","SARS-CoV-2","ACAGTGAAAGCGTTTT",3,59.87,10.77,0.01,0.07,2.96,1.02,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","ACAGTGAAAGTGTCTG",4,203.13,8.82,-1.95,0.06,2.88,1.08,0,">1 nonsynonymous","S36E N157M",2
"lib1","SARS-CoV-2","ACAGTGAAATTGATTA",2,51.58,10.81,0.05,0.07,2.92,1.06,0,"1 nonsynonymous","P197D",1
"lib1","SARS-CoV-2","ACAGTGAACCAACAGT",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W C61K Q168S",3
"lib1","SARS-CoV-2","ACAGTGACACTTCTAC",4,1.27,NA,NA,NA,NA,NA,NA,"stop","D34M K48* N92L D98V A105D Y123V Y143S Y165L P197N",9
"lib1","SARS-CoV-2","ACAGTGACAGGGGAAA",5,54.12,10.72,-0.04,0.06,2.97,1.02,0,">1 nonsynonymous","S184N P191N",2
"lib1","SARS-CoV-2","ACAGTGACCCATTAAT",3,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69G K94G N157S",3
"lib1","SARS-CoV-2","ACAGTGACGTTAAAAA",1,7.33,10.45,-0.31,0.06,2.96,1,0,">1 nonsynonymous","L57I V115M",2
"lib1","SARS-CoV-2","ACAGTGACTAATATAC",1,4.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G196S",1
"lib1","SARS-CoV-2","ACAGTGAGATACAGTG",2,38.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7H A67N",2
"lib1","SARS-CoV-2","ACAGTGAGTACAATTA",3,57.21,10.82,0.05,0.07,2.99,1,0,">1 nonsynonymous","F62A N120A",2
"lib1","SARS-CoV-2","ACAGTGATGGTTAAAG",1,29.75,9.11,-1.66,0.16,1.6,1.16,0.01,">1 nonsynonymous","D68M T201W",2
"lib1","SARS-CoV-2","ACAGTGATGTACCAAG",7,18.5,9.02,-1.74,0.38,1.5,1,0.07,">1 nonsynonymous","R127P N171V",2
"lib1","SARS-CoV-2","ACAGTGATTGATTAGC",5,54.67,10.13,-0.63,0.12,2.08,1.06,0.01,">1 nonsynonymous","N58R Y123I",2
"lib1","SARS-CoV-2","ACAGTGCAAATCATCA",4,56.97,10.38,-0.39,0.06,2.92,1.05,0,">1 nonsynonymous","N4P G155R",2
"lib1","SARS-CoV-2","ACAGTGCATGAGCACT",4,25.97,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","ACAGTGCGGCAACTTT",1,112.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K56R D59G I138H G152Y Y159V P177R",6
"lib1","SARS-CoV-2","ACAGTGCTGACAACGG",2,93.93,10.76,0,0.08,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGTGCTTGGGAAAC",5,40.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3V G51I Y91L",3
"lib1","SARS-CoV-2","ACAGTGGCAAACGAAA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","A22K D59* I80T I138V",4
"lib1","SARS-CoV-2","ACAGTGGCCCAACCCT",7,52.02,9.31,-1.45,0.21,1.64,1.16,0.01,">1 nonsynonymous","F17Y W106L",2
"lib1","SARS-CoV-2","ACAGTGGCTGTGGACG",1,18.41,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50A D97V N171L",3
"lib1","SARS-CoV-2","ACAGTGGGAAACCGAT",4,24.88,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N40Y A105S K128M E135T T148N F160M G172L E186Y",8
"lib1","SARS-CoV-2","ACAGTGGGGGCTTTGA",13,2.47,NA,NA,NA,NA,NA,NA,"stop","R136F Q144*",2
"lib1","SARS-CoV-2","ACAGTGTCAACATGAG",6,108.69,6.52,-4.25,0.45,1.5,1.09,0.03,">1 nonsynonymous","I28Y Q168S P177R",3
"lib1","SARS-CoV-2","ACAGTGTCATCTTTAA",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R F99L N157S",3
"lib1","SARS-CoV-2","ACAGTGTTAGTAAAAA",4,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K A33N D68L D97R V173Y Y178F",6
"lib1","SARS-CoV-2","ACAGTGTTGAACCCGG",2,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P N109Q S139F",3
"lib1","SARS-CoV-2","ACAGTTAAAGATAATA",2,49.3,10.5,-0.26,0.07,2.87,1.05,0,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","ACAGTTAAGACTTCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","ACAGTTACCAGGGCTA",3,15.66,6.89,-3.87,0.3,1.86,1.21,0.01,">1 nonsynonymous","P96F G146V",2
"lib1","SARS-CoV-2","ACAGTTAGAAACGTTA",5,55.41,7.06,-3.7,0.25,1.5,1.18,0.01,">1 nonsynonymous","A67R Q144G",2
"lib1","SARS-CoV-2","ACAGTTATATTCGTCT",3,129.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K56N P177N",2
"lib1","SARS-CoV-2","ACAGTTATCAAGTTCA",1,25.13,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G86I S200W",2
"lib1","SARS-CoV-2","ACAGTTATGAAATCCG",3,6.36,10.05,-0.72,0.28,2.49,1.5,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACAGTTATGTCCGAAA",8,52.7,6.32,-4.44,0.46,1.5,1.2,0.01,">1 nonsynonymous","T15N A89N W106N N151L G152C Y165P",6
"lib1","SARS-CoV-2","ACAGTTATTAACCATA",1,27.59,9.79,-0.98,0.14,2.06,1.11,0.01,">1 nonsynonymous","L5V S19R V37M C61Q",4
"lib1","SARS-CoV-2","ACAGTTCAACTTGGTT",7,120.84,10.68,-0.08,0.03,2.93,1.04,0,">1 nonsynonymous","V173W T201L",2
"lib1","SARS-CoV-2","ACAGTTCACTCGGCAA",12,98.71,10.85,0.09,0.09,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACAGTTCCCCATTCCT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","Y91L S129* I142D Q163R",4
"lib1","SARS-CoV-2","ACAGTTCGGATATGAC",7,76.99,10.76,-0.01,0.09,2.86,1.1,0,">1 nonsynonymous","Y35L S41I I142L Q168Y",4
"lib1","SARS-CoV-2","ACAGTTCTAAATTTTC",9,61.51,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9T N107R Q163T N171P V180Y",5
"lib1","SARS-CoV-2","ACAGTTCTGGAGGGAT",9,87.67,8.39,-2.37,0.11,2.16,1.11,0,">1 nonsynonymous","F126K F185H",2
"lib1","SARS-CoV-2","ACAGTTGAATAGGTAT",2,43.85,9.38,-1.38,0.1,2.76,1.15,0,">1 nonsynonymous","K87E Y121L V153T Q163H T201N",5
"lib1","SARS-CoV-2","ACAGTTGACAGTCACC",3,30.77,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y50P A89R",2
"lib1","SARS-CoV-2","ACAGTTGACTGAGTTG",8,37.4,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","T55E A105R R136V",3
"lib1","SARS-CoV-2","ACAGTTGAGACTATAT",1,7.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2P T63L P96M G155V",4
"lib1","SARS-CoV-2","ACAGTTGGGGGTGATA",8,21.68,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","V103D Q144S Y175S",3
"lib1","SARS-CoV-2","ACAGTTGTAATAGGAA",1,41.84,10.07,-0.7,0.1,2.61,1.15,0,">1 nonsynonymous","C6D S41A",2
"lib1","SARS-CoV-2","ACAGTTGTCAACTTAA",5,115.27,6.23,-4.53,0.58,1.5,1.21,0.01,"1 nonsynonymous","Y50D",1
"lib1","SARS-CoV-2","ACAGTTTAAACAGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R Q84Y Y121T D137E F160I Q168R",6
"lib1","SARS-CoV-2","ACAGTTTAAAGTATCT",7,112.85,8.57,-2.19,0.06,2.76,1.1,0,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","ACAGTTTAATAGACAT",8,116.17,10.76,0,0.07,2.93,1.05,0,">1 nonsynonymous","K56E K114S K198D",3
"lib1","SARS-CoV-2","ACAGTTTAATATGTCT",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Y123I",2
"lib1","SARS-CoV-2","ACAGTTTACTTAGCGG",2,47.1,6.35,-4.41,0.59,1.5,1.22,0.02,">1 nonsynonymous","D112A P149N",2
"lib1","SARS-CoV-2","ACAGTTTAGGATCGAT",5,18.58,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L95W T148D R179M",3
"lib1","SARS-CoV-2","ACAGTTTATACTAACA",1,41.58,10.24,-0.52,0.06,2.88,1,0,">1 nonsynonymous","F44I C61R F134Q",3
"lib1","SARS-CoV-2","ACAGTTTCCATATTTT",7,57.16,10.84,0.08,0.07,2.96,1.02,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","ACATAAAAAATACACT",12,131.36,10.18,-0.58,0.1,2.62,1.01,0,">1 nonsynonymous","W106Q L122F",2
"lib1","SARS-CoV-2","ACATAAAAACGAAATA",2,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K G51V A81T D112Q",4
"lib1","SARS-CoV-2","ACATAAAAAGTTAACC",2,43.58,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86V S139F",2
"lib1","SARS-CoV-2","ACATAAAAATATACGA",5,55.52,10.12,-0.65,0.05,2.94,1,0,">1 nonsynonymous","Y66F Y175H",2
"lib1","SARS-CoV-2","ACATAAAACACTCAAT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","V37F S41*",2
"lib1","SARS-CoV-2","ACATAAAACCACATAA",3,11.89,6.89,-3.88,0.84,1.5,1.03,0.06,">1 nonsynonymous","D34I C49Y F70T G166E",4
"lib1","SARS-CoV-2","ACATAAAACTCAAATC",5,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P S41V K56P L95A F99L",5
"lib1","SARS-CoV-2","ACATAAAACTTATTAC",1,13.88,10.67,-0.09,0.05,2.95,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACATAAAAGATACATT",8,1.12,NA,NA,NA,NA,NA,NA,"stop","T3W R16F S29L R78W A81* A89P K128H S139R",8
"lib1","SARS-CoV-2","ACATAAAAGCCGTAAA",11,190.92,10.76,0,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATAAAAGTGCAACG",2,24.69,10.18,-0.59,0.1,2.6,1,0,">1 nonsynonymous","F99L N171V",2
"lib1","SARS-CoV-2","ACATAAAATACAAATG",2,8.53,9.54,-1.23,0.22,1.8,1.06,0.02,">1 nonsynonymous","T15C A89T",2
"lib1","SARS-CoV-2","ACATAAAATACCAGGC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","Y21* G51M G152M",3
"lib1","SARS-CoV-2","ACATAAAATATCTTAT",1,18.12,6.58,-4.19,0.8,1.5,1.2,0.05,">1 nonsynonymous","C61L V180F",2
"lib1","SARS-CoV-2","ACATAAAATTCATTAA",1,5.14,10,-0.77,0.18,3,1.04,0.01,">1 nonsynonymous","Y121F V173L",2
"lib1","SARS-CoV-2","ACATAAACAAGCTTAG",4,43.51,9.76,-1,0.16,1.97,1.08,0.01,">1 nonsynonymous","S19A G152C",2
"lib1","SARS-CoV-2","ACATAAACCCCAACTG",1,10.94,7.84,-2.93,0.28,1.5,1.03,0.04,">1 nonsynonymous","E154L Y165R",2
"lib1","SARS-CoV-2","ACATAAACCTTAGGAG",3,34.84,10.41,-0.36,0.12,2.84,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACATAAACGAACTTTC",1,14.32,6.22,-4.55,0.37,1.66,1.08,0.01,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","ACATAAACGAATTAAT",5,5.78,NA,NA,NA,NA,NA,NA,"stop","F8C D68* F167K",3
"lib1","SARS-CoV-2","ACATAAACGATCTATT",2,35.47,9.61,-1.16,0.17,1.69,1.18,0.01,">1 nonsynonymous","N4Y T46A E135K A190G",4
"lib1","SARS-CoV-2","ACATAAACGTCGCAAT",3,136.32,10.24,-0.53,0.03,2.92,1,0,">1 nonsynonymous","S53F G174D",2
"lib1","SARS-CoV-2","ACATAAACTAAACACT",5,0,NA,NA,NA,NA,NA,NA,"stop","G86L I104L G155*",3
"lib1","SARS-CoV-2","ACATAAACTACTATAA",2,45.86,9.9,-0.87,0.07,2.84,1.06,0,">1 nonsynonymous","Y35V K114G",2
"lib1","SARS-CoV-2","ACATAAAGCAGTTCTA",2,12.79,10.61,-0.15,0.18,2.67,1.18,0.01,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","ACATAAAGTTATATCA",6,60.25,10.68,-0.09,0.09,2.92,1.08,0,"1 nonsynonymous","N151G",1
"lib1","SARS-CoV-2","ACATAAATAACGTTGC",5,73.51,10.82,0.06,0.07,2.92,1.04,0,">1 nonsynonymous","K132L Y143F P197W",3
"lib1","SARS-CoV-2","ACATAAATACCTAAAA",4,112.94,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N107V F167C",2
"lib1","SARS-CoV-2","ACATAAATAGAATAGA",1,0.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38N",1
"lib1","SARS-CoV-2","ACATAAATCAATAACT",9,174.39,10.78,0.02,0.05,2.89,1.06,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","ACATAAATCATACCCA",1,10.41,10.4,-0.37,0.24,2.77,1,0.05,">1 nonsynonymous","V71I K132L C150T L162R",4
"lib1","SARS-CoV-2","ACATAAATCCAGCGTA",10,96.23,7.82,-2.95,0.13,1.69,1.1,0.01,"1 nonsynonymous","N157I",1
"lib1","SARS-CoV-2","ACATAAATCGACACAT",2,39.9,8.55,-2.22,0.15,2.75,1.12,0.01,">1 nonsynonymous","G152I F156L G174L P197S",4
"lib1","SARS-CoV-2","ACATAAATCGAGTATT",4,38.47,9.02,-1.74,0.18,1.65,1.19,0.01,">1 nonsynonymous","G86A K128V S200L",3
"lib1","SARS-CoV-2","ACATAAATCTAATACT",1,34.73,9.87,-0.9,0.08,2.68,1.03,0,">1 nonsynonymous","P133D T148L Q163R",3
"lib1","SARS-CoV-2","ACATAAATGGCGGAAT",2,20.57,9.94,-0.83,0.13,2.45,1,0.01,">1 nonsynonymous","V37C W106F",2
"lib1","SARS-CoV-2","ACATAAATGTTTAACT",3,45.7,6.05,-4.72,0.65,1.5,1.1,0.01,">1 nonsynonymous","A18T N157V",2
"lib1","SARS-CoV-2","ACATAAATTACTATGA",4,25.44,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","T55L Q176S V181Y",3
"lib1","SARS-CoV-2","ACATAAATTAGTAGCT",1,6.99,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N40T Y50Q V77G A190T K199I",5
"lib1","SARS-CoV-2","ACATAAATTTACATTA",3,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K V77E V103I Y119L",4
"lib1","SARS-CoV-2","ACATAAATTTGGTGTT",8,118.03,9.15,-1.62,0.06,2.64,1.15,0,">1 nonsynonymous","F12L P54R A145K",3
"lib1","SARS-CoV-2","ACATAACAAATAGTAC",4,84.6,10.21,-0.56,0.04,2.94,1,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","ACATAACAACCTCCGG",8,17.73,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V181G F185P",2
"lib1","SARS-CoV-2","ACATAACAAGAATAGA",2,5.89,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A105S S147H G174V V182T",4
"lib1","SARS-CoV-2","ACATAACAAGTAAGTT",4,59.06,10.77,0.01,0.08,2.86,1.07,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","ACATAACAATATGAAA",1,22.92,10.6,-0.16,0.05,2.94,1,0,">1 nonsynonymous","V32K P133A",2
"lib1","SARS-CoV-2","ACATAACATACATCAT",3,58.25,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2S G86F Y91Q L122E",4
"lib1","SARS-CoV-2","ACATAACATCGAGGTT",5,29.15,7.74,-3.02,0.38,1.5,1,0.05,">1 nonsynonymous","G9W S113L Y121T",3
"lib1","SARS-CoV-2","ACATAACATGAAACAA",3,38.21,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44M D68G K87D",3
"lib1","SARS-CoV-2","ACATAACCAGCGAACA",1,44.84,8.92,-1.84,0.17,2.22,1.16,0.01,">1 nonsynonymous","F160A Q176R",2
"lib1","SARS-CoV-2","ACATAACCCCGGAGGG",4,42.13,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","R25D F99L I104R",3
"lib1","SARS-CoV-2","ACATAACCGATAAACA",1,28.53,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L60G G86L T148I",3
"lib1","SARS-CoV-2","ACATAACCGTAGAGAC",2,0.17,NA,NA,NA,NA,NA,NA,"stop","G9L S45* N64S",3
"lib1","SARS-CoV-2","ACATAACCTTGCCGAA",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T F156K",2
"lib1","SARS-CoV-2","ACATAACGCATTGAAT",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F Y91G W106M A190V",4
"lib1","SARS-CoV-2","ACATAACGCGTTAACC",3,80.58,10.74,-0.02,0.06,2.94,1.01,0,"1 nonsynonymous","S147I",1
"lib1","SARS-CoV-2","ACATAACGTATGCTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","ACATAACTACCATAGA",6,45.34,10.8,0.04,0.13,2.77,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATAACTACTAGCCT",2,51.65,10.24,-0.52,0.03,2.92,1,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","ACATAACTAGGAGGAA",2,22.47,8.5,-2.26,0.24,1.5,1.17,0.02,">1 nonsynonymous","E76A F134T",2
"lib1","SARS-CoV-2","ACATAACTAGTTGAAG",3,82.76,9.97,-0.8,0.04,2.96,1,0,">1 nonsynonymous","K87I V115G",2
"lib1","SARS-CoV-2","ACATAACTATTCCTAT",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N T55H W106Y S139T",4
"lib1","SARS-CoV-2","ACATAACTCTTCATCA",4,47.37,8.51,-2.25,0.23,1.63,1.19,0.02,">1 nonsynonymous","D90C P149K G155I T201P",4
"lib1","SARS-CoV-2","ACATAACTTAACATTA",6,0.32,NA,NA,NA,NA,NA,NA,"stop","I2T G83C F126R Y159L T193I T201*",6
"lib1","SARS-CoV-2","ACATAACTTGTAATAT",5,78.14,10.3,-0.46,0.05,2.83,1.01,0,">1 nonsynonymous","I2H T15N L60S",3
"lib1","SARS-CoV-2","ACATAAGAAGATTCAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M Q84C Y165E V173R",4
"lib1","SARS-CoV-2","ACATAAGACACACCGA",2,3.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACATAAGACCCCGGGT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","L60R S164*",2
"lib1","SARS-CoV-2","ACATAAGAGTAATTTT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","V37N A81R D98R S113E L122*",5
"lib1","SARS-CoV-2","ACATAAGCAAAAGATA",6,115.95,10.61,-0.15,0.08,2.86,1.02,0,"1 nonsynonymous","Q176N",1
"lib1","SARS-CoV-2","ACATAAGCAATAGCTT",3,69.33,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","Y93N",1
"lib1","SARS-CoV-2","ACATAAGCTGAAGACT",1,73.68,8.68,-2.09,0.09,2.9,1.11,0,">1 nonsynonymous","C61A Y119C",2
"lib1","SARS-CoV-2","ACATAAGCTTGAAGAC",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H F47R L60K",3
"lib1","SARS-CoV-2","ACATAAGGAATGCAAA",1,36.36,9.47,-1.29,0.12,2.34,1.07,0.01,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","ACATAAGGCGAGTTAT",10,84.45,10.83,0.06,0.06,2.99,1,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","ACATAAGGTTTCAACA",2,36.11,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","F70T",1
"lib1","SARS-CoV-2","ACATAAGTTAATGTTG",1,1.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","ACATAAGTTTGTGACA",4,50.64,7.52,-3.24,0.3,1.5,1.14,0.03,">1 nonsynonymous","G9S Q144F F156K F185C",4
"lib1","SARS-CoV-2","ACATAATAAAACCAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9W Y121* F156S",3
"lib1","SARS-CoV-2","ACATAATAAATGCCAT",1,55.4,6,-4.76,1.49,1.5,1.17,0.03,">1 nonsynonymous","S19L C31T N107E G146K",4
"lib1","SARS-CoV-2","ACATAATAACTGCCGC",2,28.02,10.05,-0.72,0.09,2.85,1,0,">1 nonsynonymous","Y121I S147K",2
"lib1","SARS-CoV-2","ACATAATAATCTTATT",2,46.79,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C61T A105V C150S K198N",4
"lib1","SARS-CoV-2","ACATAATACAGAAAAT",3,123.57,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","G172F",1
"lib1","SARS-CoV-2","ACATAATACCTATGGG",10,142.75,10.71,-0.05,0.07,2.91,1.07,0,">1 nonsynonymous","G9E T201D",2
"lib1","SARS-CoV-2","ACATAATACGTACATG",1,13.78,10.59,-0.17,0.14,2.87,1.05,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","ACATAATAGCATGTGA",13,66.08,6.21,-4.56,0.54,1.5,1.18,0.01,">1 nonsynonymous","G101S G146L",2
"lib1","SARS-CoV-2","ACATAATAGGCCAACA",1,15.49,10.76,0,0.1,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATAATAGGTTGGTG",5,37.25,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P54E C61A Q84L K87M N107R V115I L122F P133L",8
"lib1","SARS-CoV-2","ACATAATATATAAACT",3,31.93,10.6,-0.16,0.07,2.95,1.01,0,">1 nonsynonymous","A18Y T63E R78S",3
"lib1","SARS-CoV-2","ACATAATATGAACATG",5,4.31,NA,NA,NA,NA,NA,NA,"stop","P7N N13F C49V P82A N130* Q176Y",6
"lib1","SARS-CoV-2","ACATAATATTACTACC",11,123.11,10.75,-0.01,0.07,2.89,1.06,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","ACATAATGAAACTAAT",2,14.86,8.74,-2.02,0.13,2.72,1.21,0.01,">1 nonsynonymous","Y39L S113K",2
"lib1","SARS-CoV-2","ACATAATGAGACGATA",6,67.3,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","G83N V103F",2
"lib1","SARS-CoV-2","ACATAATTAAAACATA",4,35.31,10.57,-0.2,0.07,2.89,1.03,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","ACATAATTACCAATTC",5,185.88,10.74,-0.02,0.07,2.86,1.06,0,">1 nonsynonymous","T46L L60M",2
"lib1","SARS-CoV-2","ACATAATTCCCAACCT",1,50.78,10.19,-0.57,0.09,2.74,1.07,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","ACATAATTTTGGTTGA",7,78.07,6,-4.76,2,3,1.21,0,">1 nonsynonymous","S43G D112P",2
"lib1","SARS-CoV-2","ACATACAACGTGAAAG",1,65.61,10.68,-0.08,0.05,2.86,1.05,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","ACATACAATAATCTTT",7,111.81,7.99,-2.78,0.22,1.5,1.06,0.02,">1 nonsynonymous","D90S Q176V",2
"lib1","SARS-CoV-2","ACATACAATGAAACCA",1,68.66,10.36,-0.4,0.07,2.86,1,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","ACATACAATTGCGGAC",12,96.84,10.7,-0.07,0.05,2.95,1,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","ACATACACAAACCTGG",1,39.09,10.07,-0.69,0.12,2.57,1.04,0.01,">1 nonsynonymous","F44L D90L",2
"lib1","SARS-CoV-2","ACATACACAACAGCAG",12,171.9,10.51,-0.26,0.04,2.9,1.04,0,"1 nonsynonymous","E10P",1
"lib1","SARS-CoV-2","ACATACACCAACGCTT",5,30.02,6,-4.76,2,3,1.18,0.01,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","ACATACACCGATGCTA",4,25.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A22T V77E",2
"lib1","SARS-CoV-2","ACATACACGAAATTTA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib1","SARS-CoV-2","ACATACACGTTTGATA",1,24.02,6.33,-4.44,0.71,1.5,1.19,0.03,">1 nonsynonymous","I80M Y93L",2
"lib1","SARS-CoV-2","ACATACACTGGTTAAT",3,49.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77N",1
"lib1","SARS-CoV-2","ACATACAGAGTGACAC",1,23.28,10.6,-0.16,0.06,2.9,1,0,"1 nonsynonymous","I138F",1
"lib1","SARS-CoV-2","ACATACAGATAAATCC",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L C49D",2
"lib1","SARS-CoV-2","ACATACAGGGACGCTA",1,34.47,9.68,-1.09,0.12,1.91,1.1,0.01,">1 nonsynonymous","N40H V103T",2
"lib1","SARS-CoV-2","ACATACAGTATTACAA",1,31.54,7.36,-3.4,0.42,1.5,1.13,0.04,">1 nonsynonymous","N4W G146I",2
"lib1","SARS-CoV-2","ACATACCAGTTTAGGA",7,24.21,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T15N D68A Q84E",3
"lib1","SARS-CoV-2","ACATACCATGGCCCCA",4,78.94,10.79,0.02,0.06,2.95,1.03,0,">1 nonsynonymous","L122S S147K",2
"lib1","SARS-CoV-2","ACATACCCCAATCTAA",12,90.45,10.79,0.03,0.06,2.95,1.04,0,">1 nonsynonymous","N24K T140K A192T",3
"lib1","SARS-CoV-2","ACATACCCGGATTGTC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","A22R Y35* F44T V103W F126T",5
"lib1","SARS-CoV-2","ACATACCGAAGACGTT",10,138.86,10.73,-0.04,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATACCGAGGCACCC",5,58.61,10.65,-0.11,0.06,2.93,1,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","ACATACCTGAATGTTA",1,5.79,6,-4.76,1.87,3,1.34,0.02,">1 nonsynonymous","T55F L122S V182Q",3
"lib1","SARS-CoV-2","ACATACCTTCACAATG",4,49.31,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59T F167V",2
"lib1","SARS-CoV-2","ACATACGAAAATTTGC",2,5.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","ACATACGACAATGAGA",1,23.67,10.41,-0.35,0.08,2.71,1,0,">1 nonsynonymous","D90T E154S Q168S",3
"lib1","SARS-CoV-2","ACATACGAGTTCAGAG",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G E135W P149N T170V",4
"lib1","SARS-CoV-2","ACATACGATGCAATGG",15,1.48,NA,NA,NA,NA,NA,NA,"stop","C61A K114*",2
"lib1","SARS-CoV-2","ACATACGCACTATTAA",4,62.36,9.99,-0.77,0.07,2.71,1.09,0,">1 nonsynonymous","P54G C61M A105S K132M",4
"lib1","SARS-CoV-2","ACATACGCGAGATCAG",4,30.31,10.68,-0.09,0.06,2.94,1.03,0,">1 nonsynonymous","G83N N151K",2
"lib1","SARS-CoV-2","ACATACGGGCGTCCAA",3,34.47,10.8,0.03,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATACGGTACCCAAA",1,24.11,10.48,-0.28,0.08,2.93,1.08,0.01,"1 nonsynonymous","R16W",1
"lib1","SARS-CoV-2","ACATACGTCCTAGAGG",1,33.07,10.34,-0.42,0.08,2.84,1,0,">1 nonsynonymous","D59S R136I",2
"lib1","SARS-CoV-2","ACATACGTTCATAAAT",2,26.56,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V103G T140G N157S",3
"lib1","SARS-CoV-2","ACATACTAAACAACGA",4,62.47,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","S36T K48G C61G V103N N120L",5
"lib1","SARS-CoV-2","ACATACTATTTAATGC",8,132.41,10.72,-0.05,0.05,2.9,1.05,0,"1 nonsynonymous","C195W",1
"lib1","SARS-CoV-2","ACATACTCCTAGTCTG",3,60.72,7.89,-2.88,0.27,1.5,1.08,0.03,">1 nonsynonymous","R25S C61I D90F T100V",4
"lib1","SARS-CoV-2","ACATACTCTGAGACAA",4,0.83,NA,NA,NA,NA,NA,NA,"stop","V71K G101*",2
"lib1","SARS-CoV-2","ACATACTGCTGAACGG",2,72.08,10.68,-0.08,0.05,2.9,1.02,0,">1 nonsynonymous","K48E T55I",2
"lib1","SARS-CoV-2","ACATACTGTATTTTTA",2,37.99,10.74,-0.02,0.09,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATACTTCAAACATA",2,15.95,9.48,-1.28,0.34,1.8,1.09,0.06,">1 nonsynonymous","A42T N64A G86C",3
"lib1","SARS-CoV-2","ACATACTTTCAGCAGA",11,41.61,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G51S P82S N107F Y121S S129C",5
"lib1","SARS-CoV-2","ACATAGAAAAGAACTT",3,22.09,7.5,-3.26,0.28,1.5,1.14,0.03,">1 nonsynonymous","E10M S45P N107Q",3
"lib1","SARS-CoV-2","ACATAGAAAAGTTGCA",11,164.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S Y91E L122K K128Y S139D",5
"lib1","SARS-CoV-2","ACATAGAACTGACAAA",7,78.95,6.65,-4.11,0.2,1.52,1.12,0.01,">1 nonsynonymous","C6D T55Q N107S T170E",4
"lib1","SARS-CoV-2","ACATAGAAGGTCAGCG",5,51.38,8.62,-2.15,0.13,2.76,1.07,0.01,"1 nonsynonymous","Y143A",1
"lib1","SARS-CoV-2","ACATAGAATAGTCGAT",3,0.48,NA,NA,NA,NA,NA,NA,"stop","Y35S F99*",2
"lib1","SARS-CoV-2","ACATAGACAAAGACGT",3,8.71,10.04,-0.73,0.07,2.95,1,0,">1 nonsynonymous","P7A F62V K94N V153S",4
"lib1","SARS-CoV-2","ACATAGACCTTTTAAT",3,33.25,6,-4.76,1.27,1.5,1.15,0.02,">1 nonsynonymous","D68A P133A",2
"lib1","SARS-CoV-2","ACATAGAGGAAGCAAA",6,74.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4G L38S T85W F99Y N118C",5
"lib1","SARS-CoV-2","ACATAGATGTGAAAAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S53* Q144S",2
"lib1","SARS-CoV-2","ACATAGATTATTGTCG",8,49.77,7.07,-3.69,0.41,1.5,1.14,0.04,">1 nonsynonymous","Y50I G83I G86H F99T N110P G116P S139A",7
"lib1","SARS-CoV-2","ACATAGCAAAATTCAC",5,63.39,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S36M R127G S139M T148L Q176R",5
"lib1","SARS-CoV-2","ACATAGCAGTAAGGTC",7,88.62,10.04,-0.73,0.1,2.43,1.09,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","ACATAGCCAAATAGAA",4,1.52,NA,NA,NA,NA,NA,NA,"stop","L38R G117*",2
"lib1","SARS-CoV-2","ACATAGCCCCTGTGCT",3,58.37,10.87,0.11,0.06,2.95,1.01,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","ACATAGCCTGCCTTAC",13,112.51,9.96,-0.8,0.08,2.53,1.05,0,">1 nonsynonymous","D75L E141F",2
"lib1","SARS-CoV-2","ACATAGCCTTGCATTG",2,25.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G74M F126V G166K P191D T201K",5
"lib1","SARS-CoV-2","ACATAGCGATCCCACC",3,111.8,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41N C61T L162T Q168T Y175D",5
"lib1","SARS-CoV-2","ACATAGCGCTTCCGAT",4,77.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V71P Y165F",2
"lib1","SARS-CoV-2","ACATAGCTCTGTTAAT",2,30.97,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","N4S L95R",2
"lib1","SARS-CoV-2","ACATAGCTGCATAACG",9,1.75,NA,NA,NA,NA,NA,NA,"stop","N4C Y21P F47P G83S F99Q V103H N130* E135T Q144L",9
"lib1","SARS-CoV-2","ACATAGCTTCTTTAAC",4,23.75,10.32,-0.44,0.05,2.91,1,0,">1 nonsynonymous","C6T Y35L G152R",3
"lib1","SARS-CoV-2","ACATAGGAAGTACGAA",3,20.69,9.2,-1.57,0.15,2.41,1.11,0.01,">1 nonsynonymous","T63F K87S P149C",3
"lib1","SARS-CoV-2","ACATAGGACATCAAAA",7,0.39,NA,NA,NA,NA,NA,NA,"stop","K128* L131G",2
"lib1","SARS-CoV-2","ACATAGGACATGATAG",5,67.29,10.84,0.08,0.06,2.96,1,0,"1 nonsynonymous","S36G",1
"lib1","SARS-CoV-2","ACATAGGACCTAAATT",1,29.88,10.2,-0.56,0.09,2.39,1,0,">1 nonsynonymous","E10A F62R T100R",3
"lib1","SARS-CoV-2","ACATAGGCAGTATTTC",3,97.25,6.06,-4.71,0.8,1.5,1.22,0.01,">1 nonsynonymous","I2G D97P C150S Q168R",4
"lib1","SARS-CoV-2","ACATAGGCAGTTTTCT",1,75.2,10.25,-0.51,0.06,2.79,1.04,0,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","ACATAGGCTTTTAGAT",2,5.27,7.35,-3.42,0.32,2.03,1.07,0.03,">1 nonsynonymous","R27L A42M C61A F167L P197Y",5
"lib1","SARS-CoV-2","ACATAGGGATAAAACA",3,79.29,10.35,-0.42,0.04,2.88,1.01,0,">1 nonsynonymous","N30W K114M",2
"lib1","SARS-CoV-2","ACATAGGTAATTATCC",2,0.56,NA,NA,NA,NA,NA,NA,"stop","N64* T85*",2
"lib1","SARS-CoV-2","ACATAGTAAATGTTAC",5,3.85,NA,NA,NA,NA,NA,NA,"stop","Y66W S113T A190*",3
"lib1","SARS-CoV-2","ACATAGTAATCCAAAC",1,9.61,9.21,-1.55,0.13,2.69,1.12,0.01,">1 nonsynonymous","L95I Y119I",2
"lib1","SARS-CoV-2","ACATAGTACTTCATAG",11,43.13,6.76,-4,0.32,1.5,1.11,0.02,">1 nonsynonymous","N64Y K87L L131G",3
"lib1","SARS-CoV-2","ACATAGTCCCGCAACC",1,7.59,6.21,-4.56,1.04,1.5,1.17,0.04,">1 nonsynonymous","L38S V52D D59E G101T F167M L183P",6
"lib1","SARS-CoV-2","ACATAGTGGGTGGGAT",8,72.19,6.23,-4.53,0.82,1.5,1.12,0.04,">1 nonsynonymous","F17V F134R Q168L L188Y T201H",5
"lib1","SARS-CoV-2","ACATAGTTACATAGGA",1,47.99,10.72,-0.04,0.05,2.98,1.01,0,">1 nonsynonymous","P149L K199P",2
"lib1","SARS-CoV-2","ACATAGTTGAGAAAGT",7,123.28,7.3,-3.47,0.13,1.5,1.15,0.01,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","ACATAGTTGGCGAAAA",1,7.54,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","K87L P177N",2
"lib1","SARS-CoV-2","ACATATAAAAGAAAAA",1,11.13,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","S45A L60T F70G G86T A105C F134D",6
"lib1","SARS-CoV-2","ACATATAAATCCCCTA",2,1543.61,9.54,-1.22,0.04,2.82,1.06,0,">1 nonsynonymous","L60F K87D A190E T201E",4
"lib1","SARS-CoV-2","ACATATAAGTCACGAC",3,22.5,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","I88S S129L Y165W",3
"lib1","SARS-CoV-2","ACATATAAGTGCGGGG",8,33.9,10.16,-0.61,0.06,2.83,1,0,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","ACATATAATCCAATAA",4,43.58,8.46,-2.3,0.3,1.5,1.01,0.03,">1 nonsynonymous","E10T V37Q F185K",3
"lib1","SARS-CoV-2","ACATATAATTGACGCT",3,55.43,6.73,-4.04,0.29,1.5,1.21,0.02,">1 nonsynonymous","D112M I142V N157S F167L G196V",5
"lib1","SARS-CoV-2","ACATATAATTTAGTGT",1,93.14,10.05,-0.72,0.1,2.04,1.05,0,">1 nonsynonymous","R136G S147T",2
"lib1","SARS-CoV-2","ACATATAGAGTACTAA",2,15.38,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I88N D112M G146S",3
"lib1","SARS-CoV-2","ACATATATCACAAAAC",1,22.54,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S113M L162S",2
"lib1","SARS-CoV-2","ACATATATGAAGCAAT",5,97.96,9.26,-1.5,0.11,2.74,1.16,0,">1 nonsynonymous","R16K G117D",2
"lib1","SARS-CoV-2","ACATATATGACCACAT",3,47.6,10.79,0.03,0.06,2.83,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","ACATATATGTTAGTCG",2,23.08,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G51L G146P G166A",3
"lib1","SARS-CoV-2","ACATATCAAAAAACAG",2,44.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10F F70M C150L Y159W T201Y",5
"lib1","SARS-CoV-2","ACATATCAAAACTATA",2,0.69,NA,NA,NA,NA,NA,NA,"stop","K56* Y119M T140D Y159*",4
"lib1","SARS-CoV-2","ACATATCAACGTAAAA",1,42.84,10.85,0.09,0.09,2.9,1.07,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","ACATATCACGCACGGT",17,246.27,6,-4.76,1.63,1.5,1.2,0.02,">1 nonsynonymous","Y35L G117D L131P Q144L C158I",5
"lib1","SARS-CoV-2","ACATATCACTTTTGTA",4,14.93,6.12,-4.64,1.02,1.5,1.17,0.03,">1 nonsynonymous","A14Y V77A L122E",3
"lib1","SARS-CoV-2","ACATATCATTGATTGG",5,43.09,9.45,-1.32,0.07,2.91,1.06,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","ACATATCCAAAAACGT",3,18.9,6.5,-4.26,0.58,1.5,1.22,0.03,">1 nonsynonymous","A89E T100R",2
"lib1","SARS-CoV-2","ACATATCCACATACAG",5,18.3,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","I2R R27W A105N K132A F160S",5
"lib1","SARS-CoV-2","ACATATCGAATTATGG",1,37.92,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S53F L95P W106F T140I",4
"lib1","SARS-CoV-2","ACATATCGAGTCATGG",1,32.81,10.88,0.12,0.08,2.91,1.07,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","ACATATCTAATGATCA",3,80.26,6.02,-4.75,1,1.5,1.15,0.02,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","ACATATCTACCAACGC",11,114.65,6.46,-4.31,0.43,1.5,1.19,0.02,">1 nonsynonymous","A81C P133L",2
"lib1","SARS-CoV-2","ACATATCTAGTGAAAG",3,41.09,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","S45R P54A Y93R S129C G166I",5
"lib1","SARS-CoV-2","ACATATCTGGGCAAAT",3,25.92,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38E P54D F99S N171T",4
"lib1","SARS-CoV-2","ACATATCTTACATACC",2,130.19,10,-0.76,0.09,2.36,1.07,0,">1 nonsynonymous","G9A V103T",2
"lib1","SARS-CoV-2","ACATATCTTTTATAGG",18,192.88,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","ACATATCTTTTGGCGT",2,290.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34P D90V Y121T",3
"lib1","SARS-CoV-2","ACATATGAACCCATTA",3,35.83,10.51,-0.25,0.05,2.84,1.08,0,">1 nonsynonymous","K56E G174H",2
"lib1","SARS-CoV-2","ACATATGAATTAAATA",4,0.48,NA,NA,NA,NA,NA,NA,"stop","K114W T201*",2
"lib1","SARS-CoV-2","ACATATGACCAACAAC",4,10.95,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","A22T A42T F62L K87N K132L Y143S",6
"lib1","SARS-CoV-2","ACATATGATATTAAGT",4,63.47,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P82N K94S",2
"lib1","SARS-CoV-2","ACATATGCACAGGACG",1,27.78,7.44,-3.33,0.15,1.87,1.12,0,">1 nonsynonymous","Y35G C158S Q168H",3
"lib1","SARS-CoV-2","ACATATGCATTAGCAG",2,1.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95A",1
"lib1","SARS-CoV-2","ACATATGCCAAATTGA",1,20.05,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C61S Y66Q D90E D137N",4
"lib1","SARS-CoV-2","ACATATGTACGCTGAG",5,246.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y93E Y119P R127P G155W Y178R",5
"lib1","SARS-CoV-2","ACATATTAATATTAGT",5,32.67,8.53,-2.24,0.21,1.96,1.13,0.02,">1 nonsynonymous","G146L Q163F",2
"lib1","SARS-CoV-2","ACATATTACCGCGCGC",12,5.1,NA,NA,NA,NA,NA,NA,"stop","T15N S36* T85S F99N S113Y N151Q T201K",7
"lib1","SARS-CoV-2","ACATATTACGTATCCA",1,48.14,8.81,-1.96,0.08,2.78,1.08,0,">1 nonsynonymous","G9K G146K",2
"lib1","SARS-CoV-2","ACATATTACTACTCAT",3,33.17,10.85,0.09,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATATTATGGTCAGT",3,62.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39H K48C Y91S N157E G174P",5
"lib1","SARS-CoV-2","ACATATTCAGTATTTA",2,2.73,NA,NA,NA,NA,NA,NA,"stop","S41N C61R L122* I138N G146S",5
"lib1","SARS-CoV-2","ACATATTCTACTACTA",1,88.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D59P F99Y N107E L125D",4
"lib1","SARS-CoV-2","ACATATTGAGCAGACG",4,76.3,10.56,-0.21,0.04,2.92,1,0,">1 nonsynonymous","G9Q T15K A33R Q168H",4
"lib1","SARS-CoV-2","ACATATTGTTGCCGCG",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51P S129T",2
"lib1","SARS-CoV-2","ACATATTTGTAACGGA",5,36.08,8.84,-1.92,0.19,1.5,1.09,0.02,">1 nonsynonymous","K48W F62C D97F L122V",4
"lib1","SARS-CoV-2","ACATCAAAAACACATC",6,0.07,NA,NA,NA,NA,NA,NA,"stop","R25* G166K V173P",3
"lib1","SARS-CoV-2","ACATCAAAATGAAAGG",4,85.73,10.8,0.04,0.08,2.91,1.05,0,"1 nonsynonymous","H189P",1
"lib1","SARS-CoV-2","ACATCAAAGACGTCCA",2,53.16,8.87,-1.89,0.21,1.5,1.01,0.02,">1 nonsynonymous","K56V G83F Y91V P133A",4
"lib1","SARS-CoV-2","ACATCAAAGGGGACTA",5,34.82,8.9,-1.86,0.36,1.5,1,0.05,">1 nonsynonymous","T55D G86S V173S",3
"lib1","SARS-CoV-2","ACATCAAATACTCGAT",2,7.89,6.14,-4.62,0.9,3,1.14,0.02,"1 nonsynonymous","F70Q",1
"lib1","SARS-CoV-2","ACATCAAATCACAGGT",1,17.69,6.54,-4.22,0.46,2.1,1.38,0.03,">1 nonsynonymous","V32K S69L F126I",3
"lib1","SARS-CoV-2","ACATCAACAATTGAGA",7,65.67,10.32,-0.44,0.04,2.92,1.03,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","ACATCAACACGATTGT",12,157.85,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A33R K94E K198S",3
"lib1","SARS-CoV-2","ACATCAACCTTCTAGT",1,32.8,10.42,-0.35,0.06,2.85,1.06,0,">1 nonsynonymous","N64G Q163W",2
"lib1","SARS-CoV-2","ACATCAACGGGGAGGC",2,31.93,7.71,-3.05,0.29,1.5,1.1,0.03,">1 nonsynonymous","S69N Y91V",2
"lib1","SARS-CoV-2","ACATCAATGCACATGC",9,134.92,10.75,-0.01,0.05,2.93,1.03,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","ACATCAATGCTGATAA",11,201.31,10.75,-0.01,0.05,2.91,1.05,0,"1 nonsynonymous","D59G",1
"lib1","SARS-CoV-2","ACATCAATTATTAAAT",1,7.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9M G51R F167R",3
"lib1","SARS-CoV-2","ACATCAATTCCCTCTT",2,21.26,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","I2R K48R D68V R136G Y165I",5
"lib1","SARS-CoV-2","ACATCACAAAAAGATC",2,16.13,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","Y66T D98L L131R Y178I S184R",5
"lib1","SARS-CoV-2","ACATCACAAAGTACCA",4,60.52,10.6,-0.16,0.05,2.98,1.01,0,"1 nonsynonymous","I138F",1
"lib1","SARS-CoV-2","ACATCACAATATGAAG",6,70.25,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9N V20M Y119R",3
"lib1","SARS-CoV-2","ACATCACAATTGAGCT",1,7.01,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y93E N110W",2
"lib1","SARS-CoV-2","ACATCACATAGTTCTG",5,115.84,10.74,-0.03,0.06,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACATCACATGCAGGGG",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y F12I K132H I138F L183T",5
"lib1","SARS-CoV-2","ACATCACGGTTATACG",12,151.99,9.88,-0.88,0.09,2.3,1.03,0,"1 nonsynonymous","F8C",1
"lib1","SARS-CoV-2","ACATCACTTTAAGAGC",2,5.68,10.08,-0.68,0.15,2.8,1,0.01,">1 nonsynonymous","A18V S139N",2
"lib1","SARS-CoV-2","ACATCAGATGAAGAAT",1,29.68,6.01,-4.75,1.23,1.5,1.12,0.02,">1 nonsynonymous","D98N V103L G146L",3
"lib1","SARS-CoV-2","ACATCAGGCTCCATTT",1,27.04,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N1Q R73P I88S G155R",4
"lib1","SARS-CoV-2","ACATCATAGAAGGAGT",8,139.77,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8S P177I",2
"lib1","SARS-CoV-2","ACATCATAGAGCCTTA",4,18.03,6.88,-3.89,0.46,1.5,1.15,0.04,">1 nonsynonymous","S36R P82K Y119R P133N Q168R V182F",6
"lib1","SARS-CoV-2","ACATCATAGCCACTTG",3,34.81,8.96,-1.81,0.17,2.12,1.16,0.01,">1 nonsynonymous","G9L T55L P96G P149S F156I T201H",6
"lib1","SARS-CoV-2","ACATCATATACACTCT",2,39.05,6,-4.76,1.33,1.5,1.17,0.03,">1 nonsynonymous","R127F N157F G174P V180S",4
"lib1","SARS-CoV-2","ACATCATATATAATGG",2,3.25,NA,NA,NA,NA,NA,NA,"stop","I2D T55* T85V L95H",4
"lib1","SARS-CoV-2","ACATCATATGTTTCAT",2,10.49,10.79,0.02,0.08,2.94,1,0,">1 nonsynonymous","D97N L122S",2
"lib1","SARS-CoV-2","ACATCATATTGCCAAG",5,105.28,9.92,-0.85,0.13,2.03,1.04,0.01,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","ACATCATCAAAAGCTA",1,61.74,10.19,-0.57,0.08,2.75,1.03,0,">1 nonsynonymous","T3K V52L N58I Q84A D90T",5
"lib1","SARS-CoV-2","ACATCATCCTACCAAA",1,28.46,10.72,-0.05,0.06,2.86,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATCATCGAGGTCCG",1,10.26,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G9K G86D D112V",3
"lib1","SARS-CoV-2","ACATCATGCATTCAAT",4,43.46,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V11D N157F",2
"lib1","SARS-CoV-2","ACATCATGGATAAATG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","N1* Y35L D98T N151K",4
"lib1","SARS-CoV-2","ACATCATTAACAATCG",2,39.9,10.4,-0.36,0.05,2.92,1.04,0,">1 nonsynonymous","I2L E154D",2
"lib1","SARS-CoV-2","ACATCATTAACCACCA",5,45.11,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","N13V R27K Y35G D90H",4
"lib1","SARS-CoV-2","ACATCATTATAAGATC",2,13.08,6,-4.76,2,3,1.2,0,">1 nonsynonymous","N4T P82A W106L N120Q S184C",5
"lib1","SARS-CoV-2","ACATCATTATCGATAG",9,5.03,NA,NA,NA,NA,NA,NA,"stop","Y93* Y175L",2
"lib1","SARS-CoV-2","ACATCATTCACCCGGT",8,27.18,6,-4.76,2,3,1.18,0.02,">1 nonsynonymous","S41L A81P",2
"lib1","SARS-CoV-2","ACATCATTGAAATATT",3,1.45,NA,NA,NA,NA,NA,NA,"stop","C6R Q144* L162E",3
"lib1","SARS-CoV-2","ACATCATTGTTAAGCT",8,79.53,9.86,-0.91,0.04,2.88,1.03,0,">1 nonsynonymous","Y119K N171S",2
"lib1","SARS-CoV-2","ACATCCAAACCTTTAG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24C T201Q",2
"lib1","SARS-CoV-2","ACATCCAACTGTACTT",1,24.42,10.87,0.11,0.08,2.95,1.06,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","ACATCCAAGCCCAATT",5,79.05,7.34,-3.42,0.43,1.5,1.15,0.05,">1 nonsynonymous","G9Q C49N N171T",3
"lib1","SARS-CoV-2","ACATCCAATCCTAATC",3,38.79,7.65,-3.11,0.19,1.5,1.11,0.01,">1 nonsynonymous","S108F L187F",2
"lib1","SARS-CoV-2","ACATCCACCGAAGCAA",3,35.6,10.49,-0.28,0.1,2.7,1.12,0.01,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","ACATCCACTTGCTAAC",1,4.62,NA,NA,NA,NA,NA,NA,"stop","F47* K114N",2
"lib1","SARS-CoV-2","ACATCCAGAACGACAA",2,12.52,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","E76T K87S S113P",3
"lib1","SARS-CoV-2","ACATCCAGCCACCATG",1,19.45,6.68,-4.08,0.28,1.54,1.15,0.02,">1 nonsynonymous","S36G F47Y G51E Y119L T170S",5
"lib1","SARS-CoV-2","ACATCCAGGATAACAT",3,101.7,10.63,-0.13,0.1,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATCCAGTATAGAAT",9,101.53,10.81,0.05,0.06,2.94,1.01,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","ACATCCATGCATACTG",5,10.38,6,-4.76,1.72,3,1.19,0.05,">1 nonsynonymous","A89P V103S P133N",3
"lib1","SARS-CoV-2","ACATCCCAAGTTTCAA",5,54.71,9.93,-0.83,0.08,2.34,1.02,0,">1 nonsynonymous","L60Y D98Y R136V",3
"lib1","SARS-CoV-2","ACATCCCACACAACCA",6,23.82,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","T46V F99T K114L Y121A T201M",5
"lib1","SARS-CoV-2","ACATCCCATGCCAATA",5,2.6,NA,NA,NA,NA,NA,NA,"stop","G9V F17R Y39L K87M K94*",5
"lib1","SARS-CoV-2","ACATCCCCAGTATTCC",1,35.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T85A C150N F156G",3
"lib1","SARS-CoV-2","ACATCCCCGAAACGAC",3,99.88,10.68,-0.09,0.05,2.87,1.1,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","ACATCCCCTCAATGAC",6,23.83,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N4G C49N K87R A145P P149L",5
"lib1","SARS-CoV-2","ACATCCCGCTTAAACT",2,35.69,6,-4.76,2,3,1.18,0,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","ACATCCCTAAATCGTA",6,64.86,10.76,0,0.1,2.86,1.08,0,">1 nonsynonymous","K26R T100M V153E",3
"lib1","SARS-CoV-2","ACATCCCTAATAATAG",12,33.82,9.81,-0.95,0.18,1.95,1.06,0.01,">1 nonsynonymous","L5R A14H W106R L122R A190V S200R",6
"lib1","SARS-CoV-2","ACATCCCTGCCGAGGT",6,48.25,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","L5S C158L",2
"lib1","SARS-CoV-2","ACATCCGATGAGTTTA",2,11.61,6,-4.76,2,3,1.37,0.03,">1 nonsynonymous","Y123C V153F V181K",3
"lib1","SARS-CoV-2","ACATCCGGCCCTATAA",1,30.27,8.6,-2.16,0.18,2.15,1.13,0.01,">1 nonsynonymous","T55L Y121T T170S",3
"lib1","SARS-CoV-2","ACATCCTATATAGTGA",9,134.35,8.58,-2.18,0.12,2.07,1.06,0.01,">1 nonsynonymous","A81F N157G",2
"lib1","SARS-CoV-2","ACATCCTATTTTGATC",6,19.53,7.1,-3.67,0.48,1.5,1.02,0.07,">1 nonsynonymous","S43L N92I R136K G146L Y178R",5
"lib1","SARS-CoV-2","ACATCCTCTGACACAT",2,28.57,8.03,-2.74,0.2,2.23,1.05,0.01,">1 nonsynonymous","Q84V D112T",2
"lib1","SARS-CoV-2","ACATCCTGAGAGGAAA",1,23.96,9.06,-1.71,0.14,2.45,1.23,0.01,">1 nonsynonymous","L57C Y123R",2
"lib1","SARS-CoV-2","ACATCCTTACTTAAAA",4,62.08,10.43,-0.34,0.06,2.91,1.07,0,"1 nonsynonymous","F62K",1
"lib1","SARS-CoV-2","ACATCCTTTAAATACT",3,14.14,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","C6Q A105N",2
"lib1","SARS-CoV-2","ACATCGAACCCGATGT",9,113.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N92E R136S",2
"lib1","SARS-CoV-2","ACATCGAAGTCGAGAT",3,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D D75R I142W Y159H",4
"lib1","SARS-CoV-2","ACATCGAATCGTATTT",5,136.37,10.04,-0.72,0.06,2.77,1.03,0,">1 nonsynonymous","Y121S K128H",2
"lib1","SARS-CoV-2","ACATCGACGGAACAAC",2,0.53,NA,NA,NA,NA,NA,NA,"stop","K26* S36L V77E N107*",4
"lib1","SARS-CoV-2","ACATCGAGCGACTCAG",5,41.35,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N24T G86R R124N F160G",4
"lib1","SARS-CoV-2","ACATCGAGGTGAAAAA",3,58.73,8.89,-1.88,0.15,1.61,1.08,0.01,">1 nonsynonymous","C6V G51M",2
"lib1","SARS-CoV-2","ACATCGAGTTTTGTGG",2,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L L57E Y121G R127I P169L R179L",6
"lib1","SARS-CoV-2","ACATCGATCCCCCGCA",2,20.4,7.39,-3.38,0.25,1.7,1.15,0.02,">1 nonsynonymous","A42Y Q144H P161G",3
"lib1","SARS-CoV-2","ACATCGATCTATGAAT",1,11.14,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A89W V103K G117K G146N P161L",5
"lib1","SARS-CoV-2","ACATCGATCTTAACAT",4,14.53,10.81,0.04,0.08,2.84,1.07,0.01,">1 nonsynonymous","T46I P197C",2
"lib1","SARS-CoV-2","ACATCGGCTAAACATG",2,74.38,10.77,0,0.09,2.94,1.04,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","ACATCGGGATGCTGCT",2,69.48,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","W23M D59W R78L K94Y L122R Y175C",6
"lib1","SARS-CoV-2","ACATCGTAAAAAAGTA",3,12.76,6,-4.76,2,3,1.13,0.02,">1 nonsynonymous","F44T T55I N107I Y119G",4
"lib1","SARS-CoV-2","ACATCGTAACCTACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","L38G S69T C102V N107A Y121* L131F",6
"lib1","SARS-CoV-2","ACATCGTACGCTCTTT",1,46.53,10.65,-0.11,0.07,2.98,1,0,">1 nonsynonymous","D59R D90M P197M",3
"lib1","SARS-CoV-2","ACATCGTTATGTCACG",1,8.52,8.97,-1.79,0.34,1.5,1.14,0.07,"1 nonsynonymous","Y21G",1
"lib1","SARS-CoV-2","ACATCGTTGATCTACG",1,29.34,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S36L T63Y V103E",3
"lib1","SARS-CoV-2","ACATCTACAAACTCTA",4,25.23,10.74,-0.03,0.07,2.91,1.04,0,">1 nonsynonymous","D90N K198L",2
"lib1","SARS-CoV-2","ACATCTACTCTGATCT",9,75.33,10.69,-0.08,0.04,2.9,1.07,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","ACATCTAGATCCTTCA",7,0.44,NA,NA,NA,NA,NA,NA,"stop","Y21Q K87R G117S P169Q T201*",5
"lib1","SARS-CoV-2","ACATCTATAAATAAAC",2,61.65,10.74,-0.03,0.05,2.92,1.01,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","ACATCTATAGTACGTG",3,100.75,10.82,0.06,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATCTATAGTGAAAG",10,289.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L122G G146M G172R",3
"lib1","SARS-CoV-2","ACATCTATCACTGTAA",2,10.87,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T15F K87N R124T N130I",4
"lib1","SARS-CoV-2","ACATCTATTGAGAGAA",10,19.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33N Y93F N118P",3
"lib1","SARS-CoV-2","ACATCTCAAAAGACAA",1,31.1,10.75,-0.02,0.06,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATCTCAAATATGCG",8,104.49,6.13,-4.64,0.6,1.56,1.19,0.01,">1 nonsynonymous","K26P Y165I Q176S",3
"lib1","SARS-CoV-2","ACATCTCATGAATTAT",2,6.83,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","S19R N40H N107L Y119M Q144L T201H",6
"lib1","SARS-CoV-2","ACATCTGAATTACCTA",1,33.89,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I2N D97A Y165P N171L",4
"lib1","SARS-CoV-2","ACATCTGCAGTTAACA",2,1.02,NA,NA,NA,NA,NA,NA,"stop","V52S K87A V103L E141*",4
"lib1","SARS-CoV-2","ACATCTGGCCTTGAAT",1,6.69,10.44,-0.33,0.24,2.91,1,0.01,">1 nonsynonymous","K87F S139A N151H H189L",4
"lib1","SARS-CoV-2","ACATCTGTAAGTACCA",3,35.38,10.67,-0.09,0.07,2.87,1.09,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","ACATCTGTGTATGGAA",2,0.68,NA,NA,NA,NA,NA,NA,"stop","D34G K114A P133K G146* F167L G172Q",6
"lib1","SARS-CoV-2","ACATCTTAAAAAAAGT",5,54.56,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","K48S L60V D68E P149V F156L",5
"lib1","SARS-CoV-2","ACATCTTAATGGCCGT",3,67.92,10.69,-0.07,0.08,2.76,1,0,">1 nonsynonymous","S164R V180I",2
"lib1","SARS-CoV-2","ACATCTTGAGCAGAAT",1,14.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C102S G146E",2
"lib1","SARS-CoV-2","ACATCTTGGCAACCAA",2,5.6,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y165P S184Y",2
"lib1","SARS-CoV-2","ACATCTTGTATCGGGC",5,0.83,NA,NA,NA,NA,NA,NA,"stop","G86* T170I",2
"lib1","SARS-CoV-2","ACATCTTGTCCTGGGC",2,37.46,8.5,-2.26,0.16,2.04,1.08,0.01,">1 nonsynonymous","N30W P96S D98N Y119M",4
"lib1","SARS-CoV-2","ACATCTTTCATAGAGC",4,0.35,NA,NA,NA,NA,NA,NA,"stop","A14R L60Y G86* F134G Y159L",5
"lib1","SARS-CoV-2","ACATGAAAAATAAAAA",10,65.87,6.02,-4.74,0.89,1.5,1.21,0.01,">1 nonsynonymous","R25K G101P K128S N157I",4
"lib1","SARS-CoV-2","ACATGAAAACAAAAGT",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F I28E D90W L95N G101T F160T",6
"lib1","SARS-CoV-2","ACATGAAACGATTTGT",4,1.93,NA,NA,NA,NA,NA,NA,"stop","N13L T201*",2
"lib1","SARS-CoV-2","ACATGAAAGGGGAGAG",6,2.6,NA,NA,NA,NA,NA,NA,"stop","I138A V153W Q163*",3
"lib1","SARS-CoV-2","ACATGAACAAAAGAAT",1,112.9,10.57,-0.2,0.05,2.88,1.08,0,">1 nonsynonymous","R16G Y35F T85S Y91F N110L",5
"lib1","SARS-CoV-2","ACATGAAGAAAAACAT",4,3.07,NA,NA,NA,NA,NA,NA,"stop","C31* T55I D90Q N118S Q176G L183E",6
"lib1","SARS-CoV-2","ACATGAAGCAAAGCTG",2,70.14,9.76,-1.01,0.11,1.76,1.09,0,"1 nonsynonymous","V173T",1
"lib1","SARS-CoV-2","ACATGAAGTTACCACA",14,224.76,9.2,-1.56,0.1,2.33,1.13,0,">1 nonsynonymous","I2R K87V D98L Y121W",4
"lib1","SARS-CoV-2","ACATGAATAAAACAAT",3,65.95,10.79,0.03,0.11,2.78,1.02,0,"1 nonsynonymous","P149V",1
"lib1","SARS-CoV-2","ACATGAATAGCGTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P96F W106*",2
"lib1","SARS-CoV-2","ACATGAATCCAACTTA",5,55.58,6,-4.76,2,3,1.12,0,">1 nonsynonymous","N13L V37S D59W P82T",4
"lib1","SARS-CoV-2","ACATGAATGGACGTCC",19,126.81,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D59Y V71E",2
"lib1","SARS-CoV-2","ACATGAATTCAAATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* G83D G174W",3
"lib1","SARS-CoV-2","ACATGAATTTTATCCA",7,105.75,9.02,-1.74,0.04,2.71,1.14,0,">1 nonsynonymous","T3D L60R Y143I",3
"lib1","SARS-CoV-2","ACATGACAGAAAATCG",5,54.67,10.65,-0.11,0.07,2.88,1.04,0,"1 nonsynonymous","T148F",1
"lib1","SARS-CoV-2","ACATGACATCAATTTG",4,17.28,6,-4.76,2,3,1.15,0,">1 nonsynonymous","P7F Y35T T55V I80K Y119C",5
"lib1","SARS-CoV-2","ACATGACCAGATTCAA",2,30.66,9.63,-1.14,0.15,2.06,1.05,0.01,">1 nonsynonymous","N13T A89C",2
"lib1","SARS-CoV-2","ACATGACCGCTTTTCG",5,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T D68E V103F",3
"lib1","SARS-CoV-2","ACATGACGACAGCGCA",4,27.36,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","G9R V182Q",2
"lib1","SARS-CoV-2","ACATGACGTGCTATTC",1,30.69,10.75,-0.01,0.09,2.91,1.09,0,">1 nonsynonymous","L5E V37L L60Q",3
"lib1","SARS-CoV-2","ACATGACTTGAAAATT",3,68.24,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35L K114S P133C Y143N G155L",5
"lib1","SARS-CoV-2","ACATGAGAAATAACAT",1,30.73,6,-4.76,1.38,2.05,1.09,0.01,">1 nonsynonymous","A81Y R124S T148A",3
"lib1","SARS-CoV-2","ACATGAGAATCAATCA",4,56.62,6.02,-4.75,1.04,1.5,1.2,0.02,">1 nonsynonymous","L5V D90S N120I V153S V180A",5
"lib1","SARS-CoV-2","ACATGAGACCTCCTCA",3,0.48,NA,NA,NA,NA,NA,NA,"stop","C6S C31L N120*",3
"lib1","SARS-CoV-2","ACATGAGACGGCAAGC",7,21.09,10.77,0.01,0.09,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATGAGACTCGCAAA",2,25.04,8.52,-2.24,0.27,1.83,1.24,0.02,">1 nonsynonymous","D90L V153Q Y165H",3
"lib1","SARS-CoV-2","ACATGAGCACTATTCA",7,22.22,6.1,-4.67,0.3,1.75,1.1,0,">1 nonsynonymous","T63A R124P G155S T201L",4
"lib1","SARS-CoV-2","ACATGAGCGCGATAAA",2,1.53,NA,NA,NA,NA,NA,NA,"stop","V103S D112R N120* P149E",4
"lib1","SARS-CoV-2","ACATGAGCTAAGAAAA",1,43.13,8.09,-2.67,0.25,1.58,1.11,0.01,">1 nonsynonymous","S19N G51F T170S",3
"lib1","SARS-CoV-2","ACATGAGGAACAGAAA",4,20.52,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9D K94Y E135G G172I S200V",5
"lib1","SARS-CoV-2","ACATGAGGCATTCCAA",1,33.74,10.12,-0.64,0.07,2.69,1.03,0,">1 nonsynonymous","I2R P133F",2
"lib1","SARS-CoV-2","ACATGAGGCCTACTGC",2,14.22,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F99R V173A V181T",3
"lib1","SARS-CoV-2","ACATGAGTCATATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I Y121D",2
"lib1","SARS-CoV-2","ACATGAGTCCCTCTGG",1,1.52,NA,NA,NA,NA,NA,NA,"stop","D34*",1
"lib1","SARS-CoV-2","ACATGAGTGCACTCAT",9,197.38,10.78,0.02,0.06,2.96,1.02,0,">1 nonsynonymous","V37W C61E",2
"lib1","SARS-CoV-2","ACATGATAACATTATT",2,0.52,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ACATGATACAGGCATT",6,84.35,10.83,0.07,0.07,2.92,1.04,0,">1 nonsynonymous","I72V G152S",2
"lib1","SARS-CoV-2","ACATGATATGCGACGC",16,62.31,6.22,-4.54,0.93,1.5,1.24,0.03,">1 nonsynonymous","A33S K94V A105Y",3
"lib1","SARS-CoV-2","ACATGATCATTTACCT",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35C L57G Y119* D137K",4
"lib1","SARS-CoV-2","ACATGATGCCTATAAC",7,31.58,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A81R T100F C102F A145E",4
"lib1","SARS-CoV-2","ACATGATTAATAGTAG",9,77.93,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","D68R",1
"lib1","SARS-CoV-2","ACATGATTTCACGTAT",5,24.81,10.31,-0.46,0.11,2.95,1,0,">1 nonsynonymous","T3K E10Y H189N",3
"lib1","SARS-CoV-2","ACATGCAACCAATGCC",3,12.85,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A18S C61G G86F",3
"lib1","SARS-CoV-2","ACATGCAATAGAGTAA",4,0.98,NA,NA,NA,NA,NA,NA,"stop","F167* V173W T201*",3
"lib1","SARS-CoV-2","ACATGCAGAACTAAAA",8,167.2,10.8,0.04,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATGCAGCACTGTAT",3,64.14,8.39,-2.38,0.17,2.31,1.14,0.01,">1 nonsynonymous","T15E Y35L S113V N120I S200L",5
"lib1","SARS-CoV-2","ACATGCAGCAGCTACG",3,67.51,10.62,-0.14,0.05,2.89,1.08,0,">1 nonsynonymous","V32R V37L T85V",3
"lib1","SARS-CoV-2","ACATGCATCCACCGAT",3,38.2,10.44,-0.32,0.05,2.9,1.02,0,"1 nonsynonymous","G83W",1
"lib1","SARS-CoV-2","ACATGCCACTCTATCC",1,22.67,10.78,0.01,0.11,2.79,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACATGCCCCTAAATAG",2,9.41,8.21,-2.55,0.32,1.67,1.03,0.05,">1 nonsynonymous","E76S D90S K114V",3
"lib1","SARS-CoV-2","ACATGCCCGCTCCGTA",7,3.08,NA,NA,NA,NA,NA,NA,"stop","T85P K114A Y143N Q168*",4
"lib1","SARS-CoV-2","ACATGCCTAAACGTAC",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S A105D F134P",3
"lib1","SARS-CoV-2","ACATGCCTGTTATAAG",4,48.58,10.72,-0.04,0.04,2.96,1.02,0,">1 nonsynonymous","V37F C61T A89V",3
"lib1","SARS-CoV-2","ACATGCCTTTGTGCTA",3,51.78,10.78,0.01,0.12,2.8,1.09,0,">1 nonsynonymous","L122V T201C",2
"lib1","SARS-CoV-2","ACATGCGAGGATAACT",6,18.51,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4T L183N",2
"lib1","SARS-CoV-2","ACATGCGCTACACTCC",7,1.16,NA,NA,NA,NA,NA,NA,"stop","K56A N120* E135S",3
"lib1","SARS-CoV-2","ACATGCGTCTCATAAC",7,1.65,NA,NA,NA,NA,NA,NA,"stop","P7* V71P K87D P161I G172S",5
"lib1","SARS-CoV-2","ACATGCTACCATGATC",2,44.16,10.46,-0.3,0.03,2.94,1.05,0,">1 nonsynonymous","G9R R16W",2
"lib1","SARS-CoV-2","ACATGCTTACCGCACA",1,24.65,6,-4.76,1.74,1.5,1.11,0.02,">1 nonsynonymous","V37L L95Q",2
"lib1","SARS-CoV-2","ACATGGAAAGAAAACT",4,0,NA,NA,NA,NA,NA,NA,"stop","C49V T63* G174F",3
"lib1","SARS-CoV-2","ACATGGAACAAGACGC",1,28.7,6.01,-4.76,1.13,1.5,1.14,0.02,">1 nonsynonymous","E10L V37C L131K",3
"lib1","SARS-CoV-2","ACATGGAACATTGGAT",1,1221.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V103S N120V",2
"lib1","SARS-CoV-2","ACATGGAATAAGTAAG",5,186.14,10.29,-0.47,0.04,2.83,1.02,0,">1 nonsynonymous","F62I S184E T201K",3
"lib1","SARS-CoV-2","ACATGGAATTAGAAGG",1,27.45,9.49,-1.28,0.16,2.4,1.12,0.01,">1 nonsynonymous","Y21S T170S",2
"lib1","SARS-CoV-2","ACATGGACAACAAATG",2,0.23,NA,NA,NA,NA,NA,NA,"stop","D98* Y123F F167A T201K",4
"lib1","SARS-CoV-2","ACATGGAGACACAAAA",1,4.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","ACATGGAGATGCCAGA",7,69.15,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5S Y50W P82S A105I",4
"lib1","SARS-CoV-2","ACATGGATAAATTTAT",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T S184Y",2
"lib1","SARS-CoV-2","ACATGGATAATCGAAG",4,32.29,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A67D K114C Y121Q",3
"lib1","SARS-CoV-2","ACATGGATCAAATAAA",1,7.89,10.77,0.01,0.05,3,1,0,">1 nonsynonymous","K132C T201L",2
"lib1","SARS-CoV-2","ACATGGATTAACTCAA",7,74.82,10.33,-0.44,0.03,2.88,1.04,0,">1 nonsynonymous","A14T V37L T140R",3
"lib1","SARS-CoV-2","ACATGGCATGCATCGG",4,12.85,10.37,-0.39,0.2,2.68,1.21,0.01,"1 nonsynonymous","A22L",1
"lib1","SARS-CoV-2","ACATGGCCACAATTGG",6,28.22,8.65,-2.12,0.23,1.5,1.04,0.02,">1 nonsynonymous","D97I F185K",2
"lib1","SARS-CoV-2","ACATGGCCAGATCTGA",10,90.98,9.72,-1.04,0.1,1.98,1.07,0,"1 nonsynonymous","L162R",1
"lib1","SARS-CoV-2","ACATGGCGTTTAATCA",2,25.47,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P7Q C158M Y165H G174D",4
"lib1","SARS-CoV-2","ACATGGCTGGTTTTCT",7,47.73,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","E10R L38P D97S V103L D112R F126I",6
"lib1","SARS-CoV-2","ACATGGGCCAAGGAAG",4,8.89,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D97H V103F G117W",3
"lib1","SARS-CoV-2","ACATGGTACGACTTGA",1,8.59,6,-4.76,2,3,1.04,0,">1 nonsynonymous","V37Y S113I Y123Q N130F G166S",5
"lib1","SARS-CoV-2","ACATGGTCGATTCAAT",8,10.35,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F8H D68W P149Q V153I G174S",5
"lib1","SARS-CoV-2","ACATGGTGCACCACAA",3,64.66,10.2,-0.57,0.04,2.92,1.05,0,">1 nonsynonymous","P7T F156V",2
"lib1","SARS-CoV-2","ACATGGTTTCTAAGAA",6,99.07,10.13,-0.63,0.08,2.65,1.02,0,">1 nonsynonymous","L5P V37Y C61F Q84H",4
"lib1","SARS-CoV-2","ACATGTAAAAGTTTAA",9,107.27,7.05,-3.72,0.31,1.5,1.13,0.02,">1 nonsynonymous","W23V Y39E D75E",3
"lib1","SARS-CoV-2","ACATGTAAATTTATAA",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63H P96V S113M V173P",4
"lib1","SARS-CoV-2","ACATGTAAGAGAAATA",4,37.57,10.26,-0.5,0.11,2.64,1.04,0,">1 nonsynonymous","Y39L W106K",2
"lib1","SARS-CoV-2","ACATGTAATAGAGAAA",2,8.17,7.35,-3.42,0.58,1.5,1.05,0.07,">1 nonsynonymous","N107Y P149S",2
"lib1","SARS-CoV-2","ACATGTAATCCATACC",3,7.08,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N4S A33H D90Y R179A",4
"lib1","SARS-CoV-2","ACATGTACGCGTAATG",7,142.75,9.07,-1.69,0.08,2.51,1.13,0,">1 nonsynonymous","L60Y N151K Q176R",3
"lib1","SARS-CoV-2","ACATGTAGTGGTCACA",8,52.48,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","L60H I88Y V180E C195E",4
"lib1","SARS-CoV-2","ACATGTATACCCCATG",3,27.89,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T63A G74P E135L",3
"lib1","SARS-CoV-2","ACATGTATTTGTTCCA",3,1.35,NA,NA,NA,NA,NA,NA,"stop","T55I D97F E135*",3
"lib1","SARS-CoV-2","ACATGTCAAAAAATTT",1,15.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60H G116S K128P L131F",4
"lib1","SARS-CoV-2","ACATGTCAAAGCGGTA",2,103.21,10.67,-0.1,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATGTCAAGTTATAC",5,46.64,6.07,-4.69,1.26,1.5,1.2,0.04,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","ACATGTCAATGTACTG",2,35.72,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T55V G86M L131R",3
"lib1","SARS-CoV-2","ACATGTCAGGCCGTAT",4,34.47,6.08,-4.68,0.8,1.5,1.07,0.02,">1 nonsynonymous","Y66L R78P D98G R127C",4
"lib1","SARS-CoV-2","ACATGTCATCACCCGA",2,76.18,8.99,-1.78,0.12,2.78,1.07,0.01,">1 nonsynonymous","V37S I88V I104F G117W",4
"lib1","SARS-CoV-2","ACATGTCTATGGCCCA",2,8.38,10.94,0.18,0.08,2.91,1,0,"1 nonsynonymous","V173A",1
"lib1","SARS-CoV-2","ACATGTGAACTAACAC",8,2.52,NA,NA,NA,NA,NA,NA,"stop","I2H P54* F70R S113P L122P S129F Q144I F160T L183N",9
"lib1","SARS-CoV-2","ACATGTGAATAAACGG",6,152.1,10.61,-0.15,0.06,2.92,1.05,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","ACATGTGACAAATATT",5,84.82,10.69,-0.07,0.06,2.91,1.04,0,"1 nonsynonymous","F160D",1
"lib1","SARS-CoV-2","ACATGTGCAAGCCTGA",1,13.82,10.84,0.08,0.07,2.96,1,0,">1 nonsynonymous","N40L K199G",2
"lib1","SARS-CoV-2","ACATGTGCCCTGCGTT",3,26.05,10.74,-0.02,0.08,2.92,1.08,0,"1 nonsynonymous","N64E",1
"lib1","SARS-CoV-2","ACATGTGGGTTTAGAT",7,63.65,8.98,-1.78,0.1,1.5,1.12,0,">1 nonsynonymous","T100R L162K",2
"lib1","SARS-CoV-2","ACATGTGGTCAATTTT",1,37.05,9.65,-1.12,0.12,2.54,1.06,0.01,">1 nonsynonymous","I2T Y121T T201N",3
"lib1","SARS-CoV-2","ACATGTGTACAGCACT",2,66.3,6,-4.76,2,1.5,1.27,0.03,"1 nonsynonymous","F167N",1
"lib1","SARS-CoV-2","ACATGTGTCATTAGTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R T63S I88P Y93F D137M V180C",6
"lib1","SARS-CoV-2","ACATGTTAAATTCAAC",1,7.69,9.51,-1.26,0.37,1.5,1.23,0.07,">1 nonsynonymous","F12R Q168R",2
"lib1","SARS-CoV-2","ACATGTTAATACTTCT",4,27.47,7.16,-3.61,0.23,1.75,1.21,0.02,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ACATGTTACTACAAGG",8,129.43,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","G51P N64Y T100I A105Y N120A",5
"lib1","SARS-CoV-2","ACATGTTATAGCTTGT",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W E76T A89Q L95T",4
"lib1","SARS-CoV-2","ACATGTTATTTCACCT",7,94.09,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F44T V77K F167V",3
"lib1","SARS-CoV-2","ACATGTTCAGAACTTG",6,78.42,9.97,-0.8,0.08,2.08,1.01,0,">1 nonsynonymous","G83V N120I",2
"lib1","SARS-CoV-2","ACATGTTCGAGCGAGA",3,34.32,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R136S V180R",2
"lib1","SARS-CoV-2","ACATGTTCTCGACACT",2,18.51,10.43,-0.33,0.1,2.83,1.03,0.01,"1 nonsynonymous","A33K",1
"lib1","SARS-CoV-2","ACATGTTGTTACTAAA",1,47.68,10.67,-0.1,0.05,2.9,1.07,0,">1 nonsynonymous","E141F T201C",2
"lib1","SARS-CoV-2","ACATGTTTATTCAATT",5,10.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","P54T Y165F G172F L183S",4
"lib1","SARS-CoV-2","ACATGTTTCGACGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* E141N",2
"lib1","SARS-CoV-2","ACATGTTTGACCCCTT",6,165.36,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9P F17T K114S G172Y",4
"lib1","SARS-CoV-2","ACATGTTTGGGGCAAT",4,25.9,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C150R G174R T201P",3
"lib1","SARS-CoV-2","ACATGTTTTAACTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91S L187*",2
"lib1","SARS-CoV-2","ACATGTTTTAGTCCAA",6,81.71,10.72,-0.04,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATTAAAAATCTATG",1,35.95,9.67,-1.1,0.12,1.82,1.11,0.01,">1 nonsynonymous","Y39S T100D T140V",3
"lib1","SARS-CoV-2","ACATTAAAAATGTAGC",5,29.81,8.05,-2.72,0.4,1.5,1,0.04,">1 nonsynonymous","A18G L57G G116F E141L",4
"lib1","SARS-CoV-2","ACATTAAAACGTGCAT",1,9.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14M G101W D112T P161F",4
"lib1","SARS-CoV-2","ACATTAAAACTATACC",4,23.9,10.53,-0.23,0.08,2.94,1,0,"1 nonsynonymous","E135M",1
"lib1","SARS-CoV-2","ACATTAAACAGGTAAA",4,58.03,6,-4.76,0.55,1.87,1.17,0.01,">1 nonsynonymous","K56Q A81T V103K R136Q",4
"lib1","SARS-CoV-2","ACATTAAACCCCCCTG",2,0.78,NA,NA,NA,NA,NA,NA,"stop","F44V G74*",2
"lib1","SARS-CoV-2","ACATTAAAGAAAACCC",2,51.19,9.56,-1.2,0.11,2.2,1.07,0.01,">1 nonsynonymous","T3S A18V G116I S129R",4
"lib1","SARS-CoV-2","ACATTAAAGAACGAAG",4,13.48,NA,NA,NA,NA,NA,NA,"stop","G166M K198*",2
"lib1","SARS-CoV-2","ACATTAAAGTATACGA",1,53.56,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G74R Q84K N171P",3
"lib1","SARS-CoV-2","ACATTAAATCCTACAG",3,64.88,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A14N Y35P L60Y I88M K114T N120F Y143V",7
"lib1","SARS-CoV-2","ACATTAAATGAATACG",7,18.72,9.47,-1.29,0.19,2.56,1.12,0.02,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","ACATTAAATTGATATA",6,52.01,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","R25M D90G N120V F126N",4
"lib1","SARS-CoV-2","ACATTAACAAGATGGA",1,21.96,6.86,-3.91,0.42,1.5,1.11,0.03,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","ACATTAACATACTTTA",2,22.26,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","P82V P161V",2
"lib1","SARS-CoV-2","ACATTAACCCGCACAA",8,39.79,6.24,-4.53,0.76,1.5,1.13,0.03,">1 nonsynonymous","V37S P82L K87M Y119L G152C",5
"lib1","SARS-CoV-2","ACATTAACCTACCTAC",3,90.85,10.73,-0.03,0.06,2.89,1.06,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","ACATTAACCTAGGTTG",4,22.2,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","L60A F99S D137G",3
"lib1","SARS-CoV-2","ACATTAAGGCGGCGGT",2,1.75,NA,NA,NA,NA,NA,NA,"stop","G86* D90M R127N S200L",4
"lib1","SARS-CoV-2","ACATTAAGTACTGATA",2,6.13,7.15,-3.62,0.4,1.52,1.15,0.06,">1 nonsynonymous","A105R D112T S139V",3
"lib1","SARS-CoV-2","ACATTAAGTATCAAAT",1,0.6,NA,NA,NA,NA,NA,NA,"stop","D98* S139K A145M",3
"lib1","SARS-CoV-2","ACATTAAGTTCTCAGC",3,8.6,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","T15S K87E A105F Y123S",4
"lib1","SARS-CoV-2","ACATTAATACCAACGT",9,70.96,6.04,-4.73,0.75,1.5,1.17,0.01,">1 nonsynonymous","G117S V180W",2
"lib1","SARS-CoV-2","ACATTAATACGCGTGA",6,123.74,8.52,-2.24,0.11,2.97,1.03,0.01,"1 nonsynonymous","Q168K",1
"lib1","SARS-CoV-2","ACATTAATCAACCCGG",5,62.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P C49M",2
"lib1","SARS-CoV-2","ACATTAATCCGATTAA",12,270.94,10.68,-0.09,0.06,2.9,1.06,0,">1 nonsynonymous","N4T A190Q K198F",3
"lib1","SARS-CoV-2","ACATTAATCTAAAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A18L V32H V37S F99*",4
"lib1","SARS-CoV-2","ACATTAATCTGAACTC",14,132.81,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8T Q144H G172V",3
"lib1","SARS-CoV-2","ACATTAATTAATAGTA",5,14.54,6.49,-4.28,0.32,1.5,1.06,0.01,">1 nonsynonymous","A42L L131R P149L Y178L",4
"lib1","SARS-CoV-2","ACATTAATTACTCAAA",1,17.28,10.78,0.01,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATTAATTGGCAGTT",9,116.59,10.26,-0.51,0.06,2.68,1.02,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","ACATTACACATAGAAA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","A14F V37Y W106* T201V",4
"lib1","SARS-CoV-2","ACATTACACATATCAA",1,5.5,6.88,-3.88,0.41,1.9,1.08,0.04,">1 nonsynonymous","G74V Y93T I104L I142T",4
"lib1","SARS-CoV-2","ACATTACAGTCCCAGT",2,39.69,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V32R K87Q Y143N F160C",4
"lib1","SARS-CoV-2","ACATTACCCAAGTTAA",7,26.25,7.87,-2.9,0.26,1.5,1.12,0.02,">1 nonsynonymous","G83V Y121M E154G",3
"lib1","SARS-CoV-2","ACATTACCCGTACAGC",3,32.84,6.98,-3.78,0.5,1.5,1.17,0.07,">1 nonsynonymous","W106L D137N V180E",3
"lib1","SARS-CoV-2","ACATTACGAATCAAGT",3,111.21,10.77,0.01,0.08,2.93,1.03,0,">1 nonsynonymous","I2S N120M",2
"lib1","SARS-CoV-2","ACATTACGACCACACC",5,1.02,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib1","SARS-CoV-2","ACATTACGGCGTTCAT",6,69.57,6.62,-4.14,0.38,1.5,1.16,0.02,">1 nonsynonymous","S113M P133I",2
"lib1","SARS-CoV-2","ACATTACTAAACTAAC",1,0.65,NA,NA,NA,NA,NA,NA,"stop","C6* N40I I142S P161L",4
"lib1","SARS-CoV-2","ACATTACTTGCCATCA",2,48.96,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","E10H Y35S S45L P177V",4
"lib1","SARS-CoV-2","ACATTAGAAACCGAGG",2,48.77,10.12,-0.64,0.1,2.59,1,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","ACATTAGAAATATCAC",2,36.05,9.98,-0.79,0.11,2.24,1.08,0.01,">1 nonsynonymous","Y35G Y66D",2
"lib1","SARS-CoV-2","ACATTAGAGAACCCAA",1,0.29,NA,NA,NA,NA,NA,NA,"stop","N64P G101S W106H N120* G166R",5
"lib1","SARS-CoV-2","ACATTAGAGCAACATA",2,18.15,6,-4.76,2,3,1.24,0,">1 nonsynonymous","C61D R124A",2
"lib1","SARS-CoV-2","ACATTAGAGGGAAATC",9,2.57,NA,NA,NA,NA,NA,NA,"stop","I28G T55* D68Q",3
"lib1","SARS-CoV-2","ACATTAGAGTATGTCA",2,5.67,6.65,-4.12,0.17,3,1.1,0.01,">1 nonsynonymous","S45V K94P",2
"lib1","SARS-CoV-2","ACATTAGCAATTATCA",1,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A P133L A145V",3
"lib1","SARS-CoV-2","ACATTAGCGCTGAACT",2,22.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34W G83F N107H",3
"lib1","SARS-CoV-2","ACATTAGTAAGTGGTA",3,78.45,9.58,-1.19,0.06,2.91,1.02,0,"1 nonsynonymous","Y143V",1
"lib1","SARS-CoV-2","ACATTAGTCCAAGTCG",5,86.41,10.69,-0.08,0.05,2.94,1.03,0,">1 nonsynonymous","L5K S41V",2
"lib1","SARS-CoV-2","ACATTAGTGAGACTAA",6,67.67,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G83I Y165V",2
"lib1","SARS-CoV-2","ACATTAGTTAATTAAG",2,1.2,NA,NA,NA,NA,NA,NA,"stop","N4H F8N A14S R27I K128T T148*",6
"lib1","SARS-CoV-2","ACATTATAACTCCAAA",1,90.73,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N107T G172V",2
"lib1","SARS-CoV-2","ACATTATAAGAATACG",4,91.28,9.62,-1.15,0.18,1.79,1.11,0.01,">1 nonsynonymous","I2W E10S A18D T140P",4
"lib1","SARS-CoV-2","ACATTATATAAAGATT",2,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T V71K K87M L122F C158T N171P P177L T201K",8
"lib1","SARS-CoV-2","ACATTATATACCATAA",14,102.91,10.1,-0.66,0.07,2.72,1.05,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","ACATTATATCCCGGCC",3,33.08,10.8,0.04,0.08,2.91,1.07,0,"1 nonsynonymous","N130I",1
"lib1","SARS-CoV-2","ACATTATATTATCCAA",2,0.69,NA,NA,NA,NA,NA,NA,"stop","G9* F17T N40K T55S",4
"lib1","SARS-CoV-2","ACATTATCAATACCTC",2,20.08,10.75,-0.01,0.05,2.94,1.04,0,">1 nonsynonymous","L5Y Y39F S129M",3
"lib1","SARS-CoV-2","ACATTATCAGATGATA",1,0.29,NA,NA,NA,NA,NA,NA,"stop","Y39* Y66M A89L G146V",4
"lib1","SARS-CoV-2","ACATTATCTAACCAAG",2,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R P82V L131R",3
"lib1","SARS-CoV-2","ACATTATCTTCGCTCC",2,12.54,7.43,-3.34,0.49,1.5,1,0.08,">1 nonsynonymous","G9Q V32A C102R L111K T170R",5
"lib1","SARS-CoV-2","ACATTATGCACTGGGA",9,178.73,8.67,-2.09,0.1,2.78,1.06,0,">1 nonsynonymous","C6F L60T Y119P",3
"lib1","SARS-CoV-2","ACATTATTGTTTCATG",4,8.27,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","E10V D34Y V103K",3
"lib1","SARS-CoV-2","ACATTATTTACATTCA",1,85.89,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A33R F44E R78S I142D Y165L Q176V A190H",7
"lib1","SARS-CoV-2","ACATTCAAACCATTTA",3,35.75,6.71,-4.05,0.58,1.5,1.1,0.06,">1 nonsynonymous","N24R Y35K A67N",3
"lib1","SARS-CoV-2","ACATTCAAACGAAGAA",16,112.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R16E N58T R179G F185Y",4
"lib1","SARS-CoV-2","ACATTCAAATTAGAAA",4,19.73,8.62,-2.14,0.3,1.5,1.04,0.05,">1 nonsynonymous","C61R A105K",2
"lib1","SARS-CoV-2","ACATTCAAATTATAAG",2,38.85,9.38,-1.38,0.17,2.31,1.12,0.01,">1 nonsynonymous","T15M S164L T201M",3
"lib1","SARS-CoV-2","ACATTCAACCAAGAAT",4,92.8,10.16,-0.61,0.05,2.7,1.07,0,">1 nonsynonymous","A89V L122R T140Y",3
"lib1","SARS-CoV-2","ACATTCAATAACACAA",1,16.58,6.55,-4.21,0.52,1.6,1.09,0.02,">1 nonsynonymous","L5I C49D R136A F185C",4
"lib1","SARS-CoV-2","ACATTCACACAGCCAA",2,60.54,10.78,0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATTCACATTAACGA",1,13.33,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","P82S F99L",2
"lib1","SARS-CoV-2","ACATTCACATTTTTAA",11,157.45,10.33,-0.43,0.05,2.9,1.04,0,">1 nonsynonymous","R16C F134N F160N",3
"lib1","SARS-CoV-2","ACATTCACGAGTATTC",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R A81R",2
"lib1","SARS-CoV-2","ACATTCACTGTTTAGA",3,41.26,10.13,-0.64,0.1,2.76,1,0,">1 nonsynonymous","R27T L57S",2
"lib1","SARS-CoV-2","ACATTCAGCATATGCA",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I I88S T140S",3
"lib1","SARS-CoV-2","ACATTCAGCCAGAGAA",1,62.42,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","S45A D59S I142S Q168K",4
"lib1","SARS-CoV-2","ACATTCAGTCGTAACT",2,144.09,10.27,-0.5,0.05,2.92,1.04,0,">1 nonsynonymous","G146A N151K F156R",3
"lib1","SARS-CoV-2","ACATTCAGTTGCCCGA",5,22.8,9.19,-1.57,0.17,1.5,1.05,0.02,">1 nonsynonymous","A14S T55S W106G",3
"lib1","SARS-CoV-2","ACATTCCAAAACGTAA",2,5.07,6,-4.76,1.88,1.5,1.17,0.05,">1 nonsynonymous","C49T V103K Q144P V173H",4
"lib1","SARS-CoV-2","ACATTCCATAATAAAT",13,5.15,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","ACATTCCATCCCTTCC",3,15.11,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","L38M K56V R73Q N120C R136Y S200L",6
"lib1","SARS-CoV-2","ACATTCCCTATAATAT",8,1.8,NA,NA,NA,NA,NA,NA,"stop","L5* T148D",2
"lib1","SARS-CoV-2","ACATTCCGAACACACG",3,25.47,10.58,-0.18,0.06,2.96,1.02,0,">1 nonsynonymous","E10D G155Q",2
"lib1","SARS-CoV-2","ACATTCCGAACCTTTA",11,95.8,8.29,-2.47,0.23,1.5,1.09,0.02,">1 nonsynonymous","G83Y L122P G174A",3
"lib1","SARS-CoV-2","ACATTCCGCACATAAT",3,50.7,10.81,0.05,0.07,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATTCCTAATAAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","T85L D98R Y121* E141G",4
"lib1","SARS-CoV-2","ACATTCCTCCTATAAA",1,20.3,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F8P V20S N30R F44H F99C",5
"lib1","SARS-CoV-2","ACATTCGACCTACGAA",12,244.85,10.76,-0.01,0.06,2.89,1.07,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","ACATTCGCAACGTTGT",2,150.23,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","W23K K87S S113L T201S",4
"lib1","SARS-CoV-2","ACATTCGCCACCCCCC",3,2.53,NA,NA,NA,NA,NA,NA,"stop","C61* P96E S139V",3
"lib1","SARS-CoV-2","ACATTCGCCCGGTGTG",8,106.54,8.73,-2.04,0.12,1.8,1.14,0,">1 nonsynonymous","R27M Y165L",2
"lib1","SARS-CoV-2","ACATTCGGCAATACTA",17,396.28,10.72,-0.04,0.05,2.88,1.07,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","ACATTCGGGGATATAA",3,64.92,9.79,-0.97,0.07,2.57,1.02,0,">1 nonsynonymous","A14E N107P",2
"lib1","SARS-CoV-2","ACATTCGGGTCCGTAG",2,11.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N40I E141A R179Y A190S",4
"lib1","SARS-CoV-2","ACATTCGTATTATTGC",2,49.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34E T85S Y175V",3
"lib1","SARS-CoV-2","ACATTCGTGAAACTTT",3,68.05,10.56,-0.21,0.05,2.9,1,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","ACATTCTACAGACTAC",2,10.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P V103S F160G",3
"lib1","SARS-CoV-2","ACATTCTCACATGAGT",1,11.14,6,-4.76,2,1.5,1.08,0.05,">1 nonsynonymous","S45P L60S Y123L K128Y I138L Y175M",6
"lib1","SARS-CoV-2","ACATTCTGCTAACTTA",8,105.6,7.67,-3.1,0.24,1.5,1.08,0.02,">1 nonsynonymous","T3V V20P G74F",3
"lib1","SARS-CoV-2","ACATTCTGTAATGCAT",10,111.71,8.01,-2.75,0.16,1.53,1.18,0.01,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","ACATTCTTTACCTACG",2,0.78,NA,NA,NA,NA,NA,NA,"stop","N107* L125R S200Q",3
"lib1","SARS-CoV-2","ACATTGAAAAACCTAT",1,0.47,NA,NA,NA,NA,NA,NA,"stop","L5R A105D L162*",3
"lib1","SARS-CoV-2","ACATTGAAATGTCGGC",1,7.09,11.17,0.41,0.11,2.88,1,0,">1 nonsynonymous","D59T N120K",2
"lib1","SARS-CoV-2","ACATTGAACAACTAAT",4,55.85,10.77,0.01,0.08,2.89,1.07,0,">1 nonsynonymous","L5T K26M",2
"lib1","SARS-CoV-2","ACATTGAACAGAGTAG",2,21.36,9.66,-1.1,0.09,2.77,1.11,0,">1 nonsynonymous","T3H C61R Y143L",3
"lib1","SARS-CoV-2","ACATTGAATACGATTG",2,18.64,6,-4.76,2,3,1.3,0.02,">1 nonsynonymous","W106L Y165S",2
"lib1","SARS-CoV-2","ACATTGACAATAATTG",5,39.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S43L L60K A67G N107T",4
"lib1","SARS-CoV-2","ACATTGACATAGAATT",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T V103N N118I P149L",4
"lib1","SARS-CoV-2","ACATTGACATTGCGAT",1,24.17,9.58,-1.18,0.15,2.19,1.16,0.01,">1 nonsynonymous","V11Q I142L",2
"lib1","SARS-CoV-2","ACATTGACCACACCGA",4,74.7,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F8K G86W P161C",3
"lib1","SARS-CoV-2","ACATTGAGACCTAACA",1,34.23,10.84,0.07,0.14,2.9,1.05,0.01,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","ACATTGAGTGTAAGAC",1,82.15,10.76,0,0.03,2.93,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","ACATTGATCAATCGCG",5,11.56,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","W106N R124Q",2
"lib1","SARS-CoV-2","ACATTGATTGATAATA",2,10.12,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","W106R Y123E N130D F160L",4
"lib1","SARS-CoV-2","ACATTGCAACTTAAAA",3,42.82,6,-4.76,1.4,1.5,1.29,0.03,">1 nonsynonymous","G116T G117S F134R T140I C195T",5
"lib1","SARS-CoV-2","ACATTGCACGTGTTGT",8,59.71,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","ACATTGCTCACGTTCT",1,33.68,10.66,-0.1,0.03,2.94,1.03,0,">1 nonsynonymous","K87H T140F T201R",3
"lib1","SARS-CoV-2","ACATTGGACTTTAGAA",2,5.04,9.82,-0.94,0.3,2.48,1,0.07,">1 nonsynonymous","R136Y G174S",2
"lib1","SARS-CoV-2","ACATTGGCACAATGTA",6,52.99,9.98,-0.78,0.12,2.41,1.02,0.01,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","ACATTGGCCTTTGAAA",2,60.25,10.43,-0.33,0.04,2.96,1,0,">1 nonsynonymous","K26I K56M E141Y",3
"lib1","SARS-CoV-2","ACATTGGGCCAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S53* A81S",2
"lib1","SARS-CoV-2","ACATTGGGCCCCCAAG",1,31.79,10.17,-0.59,0.12,2.8,1.1,0.01,">1 nonsynonymous","I2T L57V",2
"lib1","SARS-CoV-2","ACATTGGGTACGCTAA",6,13.78,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3M D59P W106G C158K",4
"lib1","SARS-CoV-2","ACATTGGTAACTGCCA",2,15.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72M P96K",2
"lib1","SARS-CoV-2","ACATTGGTCAATCTGA",3,69.72,9.83,-0.93,0.11,2.07,1.06,0,">1 nonsynonymous","E10F S36M S139A T201Q",4
"lib1","SARS-CoV-2","ACATTGGTTTGTTAAT",2,18.17,8.6,-2.17,0.1,1.91,1.05,0.01,">1 nonsynonymous","R73C N151I K198S",3
"lib1","SARS-CoV-2","ACATTGTACACCCCAA",1,10.96,10.67,-0.09,0.1,2.75,1.23,0.01,">1 nonsynonymous","V37S S129A",2
"lib1","SARS-CoV-2","ACATTGTATAAACGAG",5,38.33,10.67,-0.09,0.05,2.94,1.02,0,">1 nonsynonymous","T3P L122K V181L P197V",4
"lib1","SARS-CoV-2","ACATTGTATGGTCCCT",2,15.88,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A18T F99S L122M",3
"lib1","SARS-CoV-2","ACATTGTATTACATCA",3,46.04,10.42,-0.34,0.05,2.95,1.01,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","ACATTGTCCCATGGCG",1,64.79,10.42,-0.34,0.03,2.94,1.03,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","ACATTGTGGGGCCTAT",2,24.05,10.62,-0.15,0.05,2.96,1.01,0,"1 nonsynonymous","K26H",1
"lib1","SARS-CoV-2","ACATTGTTAGCCCCAA",3,8.11,6,-4.76,2,3,1.1,0.02,">1 nonsynonymous","F167G L188S S200R",3
"lib1","SARS-CoV-2","ACATTGTTCGCATAAC",10,187.18,10.24,-0.53,0.05,2.79,1.02,0,">1 nonsynonymous","D90L K132R E141A",3
"lib1","SARS-CoV-2","ACATTTAAACCTTAGT",5,18.7,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y91F T100P E186Y",3
"lib1","SARS-CoV-2","ACATTTAAAGTCACAT",4,1.59,NA,NA,NA,NA,NA,NA,"stop","C61D I80* G86Q S139F",4
"lib1","SARS-CoV-2","ACATTTAATAATAAAA",1,23.1,8.5,-2.26,0.35,1.5,1.19,0.06,">1 nonsynonymous","F99Y N107G N151S K198Q",4
"lib1","SARS-CoV-2","ACATTTAATACTATTG",5,50.62,10.81,0.05,0.06,2.89,1.04,0,"1 nonsynonymous","S36M",1
"lib1","SARS-CoV-2","ACATTTACATTACAAT",4,36.87,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37W V103R G174V",3
"lib1","SARS-CoV-2","ACATTTACTAGCCCGA",5,1.93,NA,NA,NA,NA,NA,NA,"stop","D97* S108I F134L",3
"lib1","SARS-CoV-2","ACATTTACTCAGCCAC",11,141.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I72R L95V F99C L131R P149D",5
"lib1","SARS-CoV-2","ACATTTAGCGCGGTCG",8,32.45,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G86V D98I V103Y Y123L S129L D137L Q168L",7
"lib1","SARS-CoV-2","ACATTTAGGAATTGAT",1,10.14,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S36Y R179T S184H",3
"lib1","SARS-CoV-2","ACATTTATAAGAACAG",1,15.5,10.42,-0.35,0.06,2.95,1.04,0,">1 nonsynonymous","I2H K87S",2
"lib1","SARS-CoV-2","ACATTTATAAGAATAG",5,36,9.06,-1.71,0.1,2.55,1.13,0,">1 nonsynonymous","S41T K87I F99V L125M",4
"lib1","SARS-CoV-2","ACATTTATACAAATTT",6,30.88,9.62,-1.14,0.06,2.9,1,0,">1 nonsynonymous","R73A D98T S200I",3
"lib1","SARS-CoV-2","ACATTTATCAAAAGTA",3,9.61,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","G86L W106D Y121M K132A K198N",5
"lib1","SARS-CoV-2","ACATTTCAAGGTATAG",2,55.66,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N13C S36G F62A Y119N Y159K",5
"lib1","SARS-CoV-2","ACATTTCACCACCAAG",4,27.11,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y50M K94T",2
"lib1","SARS-CoV-2","ACATTTCACGTGAGGA",4,82.52,10.73,-0.03,0.08,2.93,1.06,0,">1 nonsynonymous","L122S V153I",2
"lib1","SARS-CoV-2","ACATTTCAGTACCATC",1,61.63,9.51,-1.26,0.11,2.05,1.06,0,">1 nonsynonymous","Y123N S147F",2
"lib1","SARS-CoV-2","ACATTTCCAAGCGCGT",1,42.23,10.25,-0.51,0.05,2.96,1.03,0,">1 nonsynonymous","C61R K87N",2
"lib1","SARS-CoV-2","ACATTTCCCACGAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R N120L P177A",3
"lib1","SARS-CoV-2","ACATTTCCGTTTACAA",1,54.1,9.48,-1.28,0.15,1.71,1.14,0.01,">1 nonsynonymous","Y50Q K198R",2
"lib1","SARS-CoV-2","ACATTTCCTTAACTGA",2,72.99,10.6,-0.16,0.03,2.93,1.03,0,">1 nonsynonymous","S129C N151S",2
"lib1","SARS-CoV-2","ACATTTCTAATACATC",3,16.32,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A89Q N107I T140P",3
"lib1","SARS-CoV-2","ACATTTCTCAGTCACA",3,52.99,6,-4.76,1.33,1.5,1.17,0.01,">1 nonsynonymous","C6S C31G Y143K",3
"lib1","SARS-CoV-2","ACATTTCTCGCGATTA",7,35.25,10.68,-0.09,0.06,2.89,1,0,"1 nonsynonymous","F160C",1
"lib1","SARS-CoV-2","ACATTTCTCGTCATCT",5,43.44,9.92,-0.85,0.09,2.32,1.05,0,">1 nonsynonymous","A14E Y35G F44H",3
"lib1","SARS-CoV-2","ACATTTGAACTAATAT",6,8.85,6.44,-4.33,0.71,1.5,1.06,0.05,">1 nonsynonymous","L5G F62N L95R V103S Y119F P191S",6
"lib1","SARS-CoV-2","ACATTTGACGTAACGA",1,55.28,8.73,-2.04,0.18,1.5,1.1,0.02,"1 nonsynonymous","R25C",1
"lib1","SARS-CoV-2","ACATTTGACTTAAGGA",3,109.77,7.97,-2.79,0.18,1.5,1.11,0.01,">1 nonsynonymous","L38K Y143W",2
"lib1","SARS-CoV-2","ACATTTGAGCCCTAAT",3,35.51,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","S43L P54D E76P F126P L162I",5
"lib1","SARS-CoV-2","ACATTTGCACGAACTC",2,15.77,6.17,-4.6,0.8,1.5,1.1,0.03,">1 nonsynonymous","V103F K114E",2
"lib1","SARS-CoV-2","ACATTTGCCGAATTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29L V52T",2
"lib1","SARS-CoV-2","ACATTTGCTCCAGAAG",1,11.31,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L95Q E141Q V173L",3
"lib1","SARS-CoV-2","ACATTTGCTTAACCCC",4,14.81,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41T P82V L183T",3
"lib1","SARS-CoV-2","ACATTTGGATCCGGTC",1,48.86,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R27P A89L N151Y",3
"lib1","SARS-CoV-2","ACATTTGGCGTAAAAG",7,95.84,10.74,-0.03,0.08,2.84,1.06,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","ACATTTGGTTACCCGC",2,8.25,NA,NA,NA,NA,NA,NA,"stop","D98V L122* S129G",3
"lib1","SARS-CoV-2","ACATTTGTCCCAATCC",10,120.14,10.83,0.06,0.08,2.92,1.04,0,"1 nonsynonymous","A22E",1
"lib1","SARS-CoV-2","ACATTTGTCCCACTGT",3,12.41,10.78,0.02,0.06,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACATTTGTGCAACACT",2,15.6,9.89,-0.87,0.18,2.35,1,0.01,">1 nonsynonymous","P7I K56L",2
"lib1","SARS-CoV-2","ACATTTGTTGTAAATA",11,116.16,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9I D98A D112K",3
"lib1","SARS-CoV-2","ACATTTTAAAGTCACA",1,22.29,10.64,-0.12,0.1,3,1.01,0,"1 nonsynonymous","S139H",1
"lib1","SARS-CoV-2","ACATTTTAGAAGCTAG",1,93.35,9.74,-1.03,0.09,2.28,1.11,0,">1 nonsynonymous","Y35Q E141R G152N",3
"lib1","SARS-CoV-2","ACATTTTAGCAGACAT",7,49.21,8.2,-2.56,0.41,1.5,1,0.05,">1 nonsynonymous","P82E Q163T",2
"lib1","SARS-CoV-2","ACATTTTATGGGCCGG",2,0.21,NA,NA,NA,NA,NA,NA,"stop","D90I L95W I104* N109E S184H",5
"lib1","SARS-CoV-2","ACATTTTCCTAACAAT",1,26.31,10.57,-0.19,0.05,2.9,1.07,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","ACATTTTGAGGTCTAG",2,1.53,NA,NA,NA,NA,NA,NA,"stop","D90V V115* R124K T148G",4
"lib1","SARS-CoV-2","ACATTTTGGCACGTGG",2,35.39,10.79,0.03,0.09,2.83,1.08,0,"1 nonsynonymous","S43F",1
"lib1","SARS-CoV-2","ACATTTTTAAGTGGAA",1,99.88,10.15,-0.62,0.07,2.75,1.04,0,">1 nonsynonymous","Y35H S41V K198H",3
"lib1","SARS-CoV-2","ACATTTTTTTCGTGCA",4,62.56,10.59,-0.17,0.06,2.9,1.08,0,"1 nonsynonymous","T148M",1
"lib1","SARS-CoV-2","ACCAAAAAAAAAATCA",3,1.27,NA,NA,NA,NA,NA,NA,"stop","F156* Q163H",2
"lib1","SARS-CoV-2","ACCAAAAAAAATATTG",1,30.78,10.16,-0.61,0.09,2.4,1.01,0,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","ACCAAAAACGTACTGT",10,76.21,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6W Y35L P96A N130S Y143P G166L",6
"lib1","SARS-CoV-2","ACCAAAAACGTGTCTT",5,37.29,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37F S43G V52N P96Q K132Y E141M",6
"lib1","SARS-CoV-2","ACCAAAAACTGACAGG",2,34.25,6.79,-3.97,0.41,1.5,1.12,0.05,">1 nonsynonymous","R25E S108V E154N V181D",4
"lib1","SARS-CoV-2","ACCAAAAATCTAATTC",1,0.21,NA,NA,NA,NA,NA,NA,"stop","I28L K87S F160*",3
"lib1","SARS-CoV-2","ACCAAAACAAATTATC",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T G51Y F156V",3
"lib1","SARS-CoV-2","ACCAAAACATCATAAA",1,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R I80W E135T C150Y",4
"lib1","SARS-CoV-2","ACCAAAACCTTAATTT",2,42.37,9.63,-1.14,0.05,2.89,1.07,0,">1 nonsynonymous","S36W Y119K",2
"lib1","SARS-CoV-2","ACCAAAACGTTCTGTA",7,49.84,10.26,-0.51,0.05,2.91,1.02,0,"1 nonsynonymous","W106F",1
"lib1","SARS-CoV-2","ACCAAAACTAATACAA",5,45.14,8.37,-2.39,0.2,1.5,1.09,0.01,">1 nonsynonymous","P82S S129I",2
"lib1","SARS-CoV-2","ACCAAAAGACAAGTAA",3,43.02,6,-4.76,2,3,1.21,0,">1 nonsynonymous","C6S E76W G101D N120L E154P G172R",6
"lib1","SARS-CoV-2","ACCAAAAGACAGTAAT",8,161.55,9.25,-1.52,0.06,2.82,1.11,0,"1 nonsynonymous","G166M",1
"lib1","SARS-CoV-2","ACCAAAAGAGCTATCT",3,67.61,6,-4.76,1.5,1.5,1.11,0.01,">1 nonsynonymous","F17N N30E K87T Y119P",4
"lib1","SARS-CoV-2","ACCAAAAGCTGAGATT",2,10.65,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N1K I28W F44M L57K Y66V W106K N130S N151P V173R",9
"lib1","SARS-CoV-2","ACCAAAATAAGAAAAA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M D34E V77M T140E V153T",5
"lib1","SARS-CoV-2","ACCAAAATACATGAAA",5,37.28,9.18,-1.59,0.19,1.56,1.12,0.01,">1 nonsynonymous","F12S K56A L122I",3
"lib1","SARS-CoV-2","ACCAAAATATCTGTTC",2,12.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P82Y K94L N107L F126G A145N",5
"lib1","SARS-CoV-2","ACCAAAATATGAATGA",4,36.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V52S I88R D98A Y119L",4
"lib1","SARS-CoV-2","ACCAAAATCAAGGATC",3,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10P D90Y",2
"lib1","SARS-CoV-2","ACCAAAATCCCCATGA",6,20.5,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42L V71M N92D F156D P169D",5
"lib1","SARS-CoV-2","ACCAAAATCGGTTAGT",3,17.26,6,-4.76,1.83,1.5,1.16,0.03,">1 nonsynonymous","L5A D112W F134P G172W",4
"lib1","SARS-CoV-2","ACCAAAATGAAGACAT",1,26.08,9.03,-1.73,0.15,2.28,1.11,0.01,"1 nonsynonymous","D112V",1
"lib1","SARS-CoV-2","ACCAAAATGAGAATAC",3,13.94,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9S D90P D98Q F134S",4
"lib1","SARS-CoV-2","ACCAAAATTAGACGAC",4,32.81,6.75,-4.01,0.35,1.5,1.15,0.02,">1 nonsynonymous","A18R Y121S E135A T201S",4
"lib1","SARS-CoV-2","ACCAAACAAACAACAA",3,97.92,9.67,-1.09,0.05,2.9,1.03,0,"1 nonsynonymous","G117A",1
"lib1","SARS-CoV-2","ACCAAACAATTAAAAT",5,38.64,6.65,-4.12,0.34,1.5,1.15,0.01,">1 nonsynonymous","C6R N109R Y175W Y178G",4
"lib1","SARS-CoV-2","ACCAAACCAAATGTCC",3,33.96,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I72R P177D",2
"lib1","SARS-CoV-2","ACCAAACCACTTAGAG",10,195.76,6,-4.76,1.01,1.5,1.18,0.01,">1 nonsynonymous","T55S I88M S147T Q176F",4
"lib1","SARS-CoV-2","ACCAAACCAGCAACCG",6,74.59,10.87,0.11,0.09,2.94,1.02,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","ACCAAACGAAAATTAC",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T Y35R",2
"lib1","SARS-CoV-2","ACCAAACGAATTGCTT",10,92.03,10.78,0.02,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAAACTATGTACAA",6,124.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5T T100K P177K",3
"lib1","SARS-CoV-2","ACCAAACTCGCTAGTT",5,54.8,10.42,-0.35,0.08,2.82,1.12,0,">1 nonsynonymous","S45G N120H",2
"lib1","SARS-CoV-2","ACCAAACTGTAGGTGA",1,16.18,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8T S36G K56P W106H",4
"lib1","SARS-CoV-2","ACCAAACTTCCCCAAC",5,98.85,10.27,-0.5,0.04,2.87,1.04,0,">1 nonsynonymous","R16V N110C E186S",3
"lib1","SARS-CoV-2","ACCAAAGAAACGACTG",5,47.26,9.29,-1.48,0.16,1.69,1.09,0.01,">1 nonsynonymous","Y39F N58Y L131F",3
"lib1","SARS-CoV-2","ACCAAAGAACCGCCAG",1,24.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2R F12E S43W C49M V52I Y66F T85A N92S",8
"lib1","SARS-CoV-2","ACCAAAGAAGAGTTAG",7,73.29,10.81,0.05,0.1,2.87,1.08,0,">1 nonsynonymous","S139T T201E",2
"lib1","SARS-CoV-2","ACCAAAGACGACACAG",2,41.71,6.1,-4.67,0.59,1.5,1.11,0.01,">1 nonsynonymous","G9K A18L Y119D T140P",4
"lib1","SARS-CoV-2","ACCAAAGACTCGAAAT",9,111.19,10.08,-0.69,0.06,2.73,1,0,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","ACCAAAGACTTCGCAG",2,37.34,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K48E V77W C150I",3
"lib1","SARS-CoV-2","ACCAAAGAGTGTGATC",6,83.73,10.11,-0.65,0.14,2.63,1.03,0.01,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","ACCAAAGATGCCGCCA",3,58.92,9.35,-1.41,0.11,2.71,1.18,0,">1 nonsynonymous","R27E G166R",2
"lib1","SARS-CoV-2","ACCAAAGCACTCTGAT",2,31.06,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S19K G86K P96Q F167G",4
"lib1","SARS-CoV-2","ACCAAAGCTAGCAAAC",4,17.12,10.88,0.11,0.08,3,1.01,0,">1 nonsynonymous","Y91I L122Q",2
"lib1","SARS-CoV-2","ACCAAAGGAACATCAT",5,130.51,10.73,-0.03,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAAAGTACAAAGCA",7,156.14,10.74,-0.03,0.03,2.89,1.04,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","ACCAAAGTAGATTTAC",10,74.71,8.89,-1.88,0.08,2.63,1.06,0,">1 nonsynonymous","V52A Y121L E154L",3
"lib1","SARS-CoV-2","ACCAAAGTATGTAGAC",2,53.59,8.94,-1.82,0.11,2.25,1.16,0.01,">1 nonsynonymous","N107V S129H",2
"lib1","SARS-CoV-2","ACCAAAGTTATTCAGT",1,3.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72R",1
"lib1","SARS-CoV-2","ACCAAATAAAAAGGCG",3,46.2,6.49,-4.27,0.46,1.5,1.11,0.02,">1 nonsynonymous","D59L K87A G116I N151P",4
"lib1","SARS-CoV-2","ACCAAATAAGCTTACA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","K56* T148*",2
"lib1","SARS-CoV-2","ACCAAATAAGTATATT",1,0.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","ACCAAATCAATGAGGC",3,6.64,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","R27K S45F Y93S N171S",4
"lib1","SARS-CoV-2","ACCAAATCATCGTACA",5,0.13,NA,NA,NA,NA,NA,NA,"stop","C31Q K56E N64G G86F Y119* R179P P191L",7
"lib1","SARS-CoV-2","ACCAAATCCTTTATTG",3,37.1,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2F W23V D97E Y143I",4
"lib1","SARS-CoV-2","ACCAAATGCGTTGTAT",1,10.88,6.67,-4.09,0.2,1.94,1.03,0.01,">1 nonsynonymous","I2M L5F A67N",3
"lib1","SARS-CoV-2","ACCAAATTCGAAAACA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","N1I T63* T85C",3
"lib1","SARS-CoV-2","ACCAAATTGCACACAC",2,46.42,10.41,-0.35,0.07,2.95,1.04,0,">1 nonsynonymous","A33S Y91F",2
"lib1","SARS-CoV-2","ACCAACAAACAATATA",2,15.77,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","G83P Y143P",2
"lib1","SARS-CoV-2","ACCAACAACAAGGATA",1,29.61,10.01,-0.76,0.08,2.53,1.03,0,"1 nonsynonymous","A81D",1
"lib1","SARS-CoV-2","ACCAACAACTTTGAGC",6,44.93,8.55,-2.21,0.2,2,1.15,0.02,">1 nonsynonymous","A14D S45D N110R Y119F T140I G155S T201N",7
"lib1","SARS-CoV-2","ACCAACAAGTGTCGAA",1,43.35,8.68,-2.08,0.1,2.97,1.01,0,"1 nonsynonymous","R73E",1
"lib1","SARS-CoV-2","ACCAACAATGTTAATT",9,25.12,6.34,-4.43,0.21,1.57,1.12,0,">1 nonsynonymous","A18I D34L",2
"lib1","SARS-CoV-2","ACCAACAATTAAACTC",11,113.35,9.54,-1.22,0.05,2.85,1.09,0,">1 nonsynonymous","Y50F N171L",2
"lib1","SARS-CoV-2","ACCAACACAATACTAC",4,71.79,10.66,-0.11,0.06,2.88,1.06,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","ACCAACACCACATCTT",2,0.92,NA,NA,NA,NA,NA,NA,"stop","S19G A105*",2
"lib1","SARS-CoV-2","ACCAACAGACTAAAGG",5,56.12,8.87,-1.89,0.18,1.5,1.12,0.01,">1 nonsynonymous","R16V G86T",2
"lib1","SARS-CoV-2","ACCAACAGCACTGTCT",1,44.83,6.15,-4.61,0.38,1.5,1.1,0.01,">1 nonsynonymous","F17P K56Q Y159R",3
"lib1","SARS-CoV-2","ACCAACAGTTACGCAT",3,38.46,6.51,-4.26,0.59,1.5,1.25,0.04,">1 nonsynonymous","L57S G117S S164C",3
"lib1","SARS-CoV-2","ACCAACATAAGGTAAA",6,72.7,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L5K W23G F62G D75F F185L",5
"lib1","SARS-CoV-2","ACCAACATTTATCACA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","F8S C49F W106R S108* S147A",5
"lib1","SARS-CoV-2","ACCAACCACATATACT",5,2.01,NA,NA,NA,NA,NA,NA,"stop","F8* C31L T63N L95P S139H G172*",6
"lib1","SARS-CoV-2","ACCAACCACCCCCATT",1,12.41,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","A14E F70E N107G",3
"lib1","SARS-CoV-2","ACCAACCACGAAAAGT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","S41T D68* D90M P96S",4
"lib1","SARS-CoV-2","ACCAACCAGAAGCTAC",4,29.23,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F17I Y50V G146S N157S",4
"lib1","SARS-CoV-2","ACCAACCATCACCTCG",13,156.02,10.75,-0.01,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAACCATGCTTATA",9,67.07,6.79,-3.98,0.48,1.5,1.1,0.03,">1 nonsynonymous","I2Q T55G G86C Y119P",4
"lib1","SARS-CoV-2","ACCAACCCCATCGTCA",3,33.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T P54I C102A",3
"lib1","SARS-CoV-2","ACCAACCCCTATAATC",13,267.29,10.63,-0.14,0.03,2.93,1.04,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","ACCAACCTCTACGACT",5,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T L60M P82V V180A",4
"lib1","SARS-CoV-2","ACCAACGAAGATATAG",4,2.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153F",1
"lib1","SARS-CoV-2","ACCAACGAGGCAGAAG",4,140.04,10.33,-0.43,0.05,2.89,1.01,0,">1 nonsynonymous","S41F K56S K87M",3
"lib1","SARS-CoV-2","ACCAACGAGTAAATCA",3,40.75,10.72,-0.05,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAACGCCACAAGAT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","F8V N64M G83* P96H",4
"lib1","SARS-CoV-2","ACCAACGCCACACGTC",8,57.01,10.28,-0.48,0.05,2.94,1,0,">1 nonsynonymous","E10Q V37M L122N F156V",4
"lib1","SARS-CoV-2","ACCAACGTAATTATAC",2,15.71,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","S41R F47N V103S L183P",4
"lib1","SARS-CoV-2","ACCAACGTGAAACCTA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P K128V T140Q G155R",4
"lib1","SARS-CoV-2","ACCAACTAAAATCAGA",2,14.01,6.2,-4.56,0.5,1.5,1.12,0.01,">1 nonsynonymous","A14W S19P G51Q D90Y F99C R136V K198M",7
"lib1","SARS-CoV-2","ACCAACTAAATGAGAG",3,73.83,10.57,-0.2,0.04,2.88,1.07,0,">1 nonsynonymous","T46L D97S",2
"lib1","SARS-CoV-2","ACCAACTAATCAATAG",4,18.33,8.99,-1.77,0.24,1.5,1.02,0.03,">1 nonsynonymous","N1D A14L E135R",3
"lib1","SARS-CoV-2","ACCAACTACTTAACTA",1,4.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","ACCAACTCATAAATAT",6,21.46,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5N T55L G83S A89I G117R",5
"lib1","SARS-CoV-2","ACCAACTCCTAATATC",2,52.41,10.6,-0.16,0.05,2.91,1.05,0,">1 nonsynonymous","I28F S41M L57N",3
"lib1","SARS-CoV-2","ACCAACTCCTCCCTAT",6,75.79,10.28,-0.48,0.04,2.92,1,0,">1 nonsynonymous","E10G A33C T140H",3
"lib1","SARS-CoV-2","ACCAACTCGACCACAA",6,65.35,6.58,-4.19,0.47,1.5,1.1,0.02,">1 nonsynonymous","I2C P54I A105E R127V",4
"lib1","SARS-CoV-2","ACCAACTCTAACAGAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","I28* S45Y D98L G155M",4
"lib1","SARS-CoV-2","ACCAACTCTAGGTTAT",6,62.56,10.62,-0.15,0.08,2.85,1.08,0,"1 nonsynonymous","V115E",1
"lib1","SARS-CoV-2","ACCAACTCTGTGGATA",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H F99P S113N Y119T S147C",5
"lib1","SARS-CoV-2","ACCAACTGAATCACTG",4,14.36,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F62A Y93D V103T S129E C158Y",5
"lib1","SARS-CoV-2","ACCAAGAAAATGATAA",1,35.94,6.62,-4.14,0.32,1.5,1.14,0.01,">1 nonsynonymous","L38R R136E",2
"lib1","SARS-CoV-2","ACCAAGAAAGGTAAAA",3,33,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G9Q R27V P54I A67N T201A",5
"lib1","SARS-CoV-2","ACCAAGAAATAATATC",3,0.76,NA,NA,NA,NA,NA,NA,"stop","F12* G166V",2
"lib1","SARS-CoV-2","ACCAAGAAGCAAACAG",3,30.68,6,-4.76,1.38,1.5,1.13,0.01,">1 nonsynonymous","G9V P54C Y119L P149I",4
"lib1","SARS-CoV-2","ACCAAGAATACAAGGA",5,55.59,10.38,-0.38,0.07,2.77,1.09,0,">1 nonsynonymous","N13K K56S G152D Y175W",4
"lib1","SARS-CoV-2","ACCAAGAATCGAATCT",1,38.89,8.4,-2.37,0.24,1.71,1.03,0.02,">1 nonsynonymous","N64D P96C G155N",3
"lib1","SARS-CoV-2","ACCAAGAATCGACAAT",2,1.36,NA,NA,NA,NA,NA,NA,"stop","K26* D34Y Y178L",3
"lib1","SARS-CoV-2","ACCAAGAATTCCCAAG",6,42.81,6.19,-4.57,0.57,1.5,1.13,0.01,">1 nonsynonymous","I2L F8M T85A G146N G152L",5
"lib1","SARS-CoV-2","ACCAAGACCCAATACC",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146L V173T",2
"lib1","SARS-CoV-2","ACCAAGAGCCTCATAG",3,55.95,8.68,-2.08,0.11,2.66,1.1,0.01,">1 nonsynonymous","Y35E Y119K",2
"lib1","SARS-CoV-2","ACCAAGAGCGCTTTCA",2,151.07,8.59,-2.18,0.12,2.51,1.11,0.01,">1 nonsynonymous","A18T N24Q G166K G174T",4
"lib1","SARS-CoV-2","ACCAAGATATCTACAA",3,19.12,6.02,-4.75,0.95,1.5,1.13,0.02,">1 nonsynonymous","P7R C49F K87T R124S",4
"lib1","SARS-CoV-2","ACCAAGCACTTAAAAG",3,30.36,9.93,-0.83,0.26,1.5,1,0.03,">1 nonsynonymous","L57W R136Y E141R",3
"lib1","SARS-CoV-2","ACCAAGCCAAAACGCC",2,58.67,9.68,-1.08,0.08,2.72,1.05,0,">1 nonsynonymous","T63N Y123N",2
"lib1","SARS-CoV-2","ACCAAGCCAACATTCC",4,114.13,8.58,-2.18,0.12,2.83,1.05,0,"1 nonsynonymous","Y159P",1
"lib1","SARS-CoV-2","ACCAAGCCAACGTAAT",1,6.7,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S41R V71K Q84L A190V",4
"lib1","SARS-CoV-2","ACCAAGCCGTAACATC",8,124.14,10.73,-0.03,0.06,2.9,1.04,0,"1 nonsynonymous","F185M",1
"lib1","SARS-CoV-2","ACCAAGGAATTGAAAG",6,2.15,NA,NA,NA,NA,NA,NA,"stop","I2M R25* C61W P82S K87S Y93L P197M",7
"lib1","SARS-CoV-2","ACCAAGGCAACCACTT",14,1.85,NA,NA,NA,NA,NA,NA,"stop","K48* D112W T201A",3
"lib1","SARS-CoV-2","ACCAAGGGAACTCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5H G83R A89V P133D P149R V153*",6
"lib1","SARS-CoV-2","ACCAAGGGATCAATTT",1,40.91,10.76,-0.01,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAAGGTACACAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","T85R C102Y G117L Y165V V180*",5
"lib1","SARS-CoV-2","ACCAAGGTTCCTAGAA",1,11.3,6.51,-4.26,0.31,1.5,1.01,0.01,">1 nonsynonymous","G9A C49D D68K C158L",4
"lib1","SARS-CoV-2","ACCAAGTACAAAATCC",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S A42L P149L H189F",4
"lib1","SARS-CoV-2","ACCAAGTACTTTTGAT",3,24.09,10.69,-0.07,0.1,2.86,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAAGTCAATGCGAT",1,20.65,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","P82K G146Q F167M Y175T",4
"lib1","SARS-CoV-2","ACCAAGTCACAGGAAA",4,69.02,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Q79P G86F C150S",3
"lib1","SARS-CoV-2","ACCAAGTCATTGCCAA",7,49.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5P S41M P96S N107I",4
"lib1","SARS-CoV-2","ACCAAGTGACCGTCAC",6,1.42,NA,NA,NA,NA,NA,NA,"stop","Y35N G86*",2
"lib1","SARS-CoV-2","ACCAAGTGGTCATCAT",10,84.9,6.33,-4.43,0.48,1.5,1.17,0.02,">1 nonsynonymous","G9V D59A A89M",3
"lib1","SARS-CoV-2","ACCAAGTTACTAAATG",5,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P S43P P54T D90L N110R L122P",6
"lib1","SARS-CoV-2","ACCAAGTTCAACCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28R P96* G152D",3
"lib1","SARS-CoV-2","ACCAAGTTCTACCCTT",13,530.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y121E N130S P177H",3
"lib1","SARS-CoV-2","ACCAATAAAAATGATA",3,114.99,7.18,-3.58,0.14,1.51,1.12,0,">1 nonsynonymous","F12I Q176D",2
"lib1","SARS-CoV-2","ACCAATAAAATCCTAC",12,129.95,6,-4.76,1,1.5,1.16,0.01,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","ACCAATAAACGAAATT",1,9.59,9.83,-0.93,0.3,1.98,1.08,0.04,">1 nonsynonymous","L5V K94F",2
"lib1","SARS-CoV-2","ACCAATAAAGGCCATT",8,34.92,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L57E W106M L122K P133F F156V G166L T201K",7
"lib1","SARS-CoV-2","ACCAATAAAGGGCTAG",13,67.98,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","T100D D112I Y121F L162M",4
"lib1","SARS-CoV-2","ACCAATAAATATTCCA",2,25.78,10.85,0.09,0.08,2.93,1.04,0,">1 nonsynonymous","I72V D97M",2
"lib1","SARS-CoV-2","ACCAATAACATTGGAC",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q D90R A105N V173P",4
"lib1","SARS-CoV-2","ACCAATAATCATACAA",6,2.49,NA,NA,NA,NA,NA,NA,"stop","N40S D59*",2
"lib1","SARS-CoV-2","ACCAATACAGATGAGT",3,14.93,8.22,-2.54,0.35,1.5,1,0.05,">1 nonsynonymous","R25K Y121M",2
"lib1","SARS-CoV-2","ACCAATACCATGTTAC",11,4.31,NA,NA,NA,NA,NA,NA,"stop","T15S S108* E141S P161V",4
"lib1","SARS-CoV-2","ACCAATACTTTGGAAT",2,21.03,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","Y39V N92L P149Q",3
"lib1","SARS-CoV-2","ACCAATAGAACAGTAA",10,10.92,NA,NA,NA,NA,NA,NA,"stop","N24* S113T N171Q",3
"lib1","SARS-CoV-2","ACCAATAGCACTAAAT",1,18.29,6,-4.76,2,1.5,1.17,0.04,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","ACCAATAGCATTTTCG",3,0,NA,NA,NA,NA,NA,NA,"stop","S36G K87I Y119V N157*",4
"lib1","SARS-CoV-2","ACCAATAGCTAAACCA",3,13.34,8.53,-2.23,0.25,1.59,1.11,0.03,">1 nonsynonymous","W106L S129F T148G",3
"lib1","SARS-CoV-2","ACCAATAGTGAAAATC",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A S43L T46N G86I A105L T140W",6
"lib1","SARS-CoV-2","ACCAATATAGGCCAGT",8,57.63,9.36,-1.4,0.14,1.95,1.11,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","ACCAATATCCCGTAAC",14,59.67,8.39,-2.38,0.3,1.5,1.06,0.03,">1 nonsynonymous","T55V R136M G146W",3
"lib1","SARS-CoV-2","ACCAATATTCTATGAC",13,12.85,NA,NA,NA,NA,NA,NA,"stop","T63L C102N Y123* F134Y",4
"lib1","SARS-CoV-2","ACCAATATTGTTAGAG",3,10.65,8.73,-2.03,0.05,2.92,1,0,">1 nonsynonymous","L5A F17W D90Y G166K",4
"lib1","SARS-CoV-2","ACCAATCAAGCCTACT",7,41.86,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82H D98S I142G C158V",4
"lib1","SARS-CoV-2","ACCAATCAATAATAAA",1,18.24,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y66A K87E G146F P149N",4
"lib1","SARS-CoV-2","ACCAATCATAAAAATG",1,12.19,6,-4.76,2,1.5,1.37,0.06,">1 nonsynonymous","N13F K87G N107S",3
"lib1","SARS-CoV-2","ACCAATCATAAAAGTT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","G9* K26L Y143L E154D",4
"lib1","SARS-CoV-2","ACCAATCCAGACTGTC",11,71.29,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64T D98Y A105K",3
"lib1","SARS-CoV-2","ACCAATCCCAATATTG",8,61.75,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y39K S45P S53W A89H N130A C158I",6
"lib1","SARS-CoV-2","ACCAATCCCCTATCTA",3,51.52,7.3,-3.47,0.11,1.76,1.05,0,"1 nonsynonymous","C158H",1
"lib1","SARS-CoV-2","ACCAATCCGTGGTGTA",6,14.21,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","K26R Y35M Q84P D112M G152N",5
"lib1","SARS-CoV-2","ACCAATCCTAGGAATA",3,35.84,10.53,-0.24,0.06,2.88,1.09,0,">1 nonsynonymous","C61K L122D",2
"lib1","SARS-CoV-2","ACCAATCGATCACGCA",1,13.35,8.98,-1.79,0.26,1.55,1.13,0.04,">1 nonsynonymous","N13V D98Y",2
"lib1","SARS-CoV-2","ACCAATCGATGACCAA",1,14.12,10.86,0.09,0.12,2.83,1.01,0.01,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","ACCAATCGCTACATCT",6,45.33,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","I2K S69R P82M L131M",4
"lib1","SARS-CoV-2","ACCAATCTTCAAGCAA",15,170.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39I F134R F167R",3
"lib1","SARS-CoV-2","ACCAATGACTTCAATC",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G F185Y",2
"lib1","SARS-CoV-2","ACCAATGAGGATTCAT",3,119.47,10.73,-0.03,0.04,2.94,1.03,0,">1 nonsynonymous","F44Y P149N",2
"lib1","SARS-CoV-2","ACCAATGAGTGCCCTA",3,63.45,10.75,-0.02,0.06,2.91,1.06,0,">1 nonsynonymous","E141Q P197T",2
"lib1","SARS-CoV-2","ACCAATGATAAGCGTA",7,107.19,9.69,-1.07,0.13,1.88,1.1,0.01,">1 nonsynonymous","V11L S69Q K128A E141V",4
"lib1","SARS-CoV-2","ACCAATGCAAAAGTTA",4,27.05,6,-4.76,1.17,1.5,1.19,0.03,">1 nonsynonymous","N13G T63N T140M T148W P177S",5
"lib1","SARS-CoV-2","ACCAATGCAACTTAAT",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44A T100D",2
"lib1","SARS-CoV-2","ACCAATGCCACTGGCT",1,29.15,6,-4.76,0.8,1.5,1.07,0,">1 nonsynonymous","F44E G83L Y93F G172R Q176G",5
"lib1","SARS-CoV-2","ACCAATGCCTACCTCA",5,100.36,9.89,-0.87,0.11,2.15,1.05,0.01,">1 nonsynonymous","F17Y Y35G",2
"lib1","SARS-CoV-2","ACCAATGCCTGAAAAA",1,13.74,10.85,0.08,0.11,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAATGCTGTGTCTC",1,0,NA,NA,NA,NA,NA,NA,"stop","S45D L57* N130L E141V C158S T201N",6
"lib1","SARS-CoV-2","ACCAATGGAATGCATC",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N F160I T201N",3
"lib1","SARS-CoV-2","ACCAATGGTGACATGA",1,7.22,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F47N K48R F99T R136L T170Y",5
"lib1","SARS-CoV-2","ACCAATGTAACACGCA",5,76.33,8.76,-2.01,0.05,2.8,1.07,0,">1 nonsynonymous","G146V T201N",2
"lib1","SARS-CoV-2","ACCAATGTATGGCCAT",2,18.86,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44S G101N I104L G146A",4
"lib1","SARS-CoV-2","ACCAATGTGACGGGAA",14,32.49,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","D112W N118F",2
"lib1","SARS-CoV-2","ACCAATGTGCAAATAA",1,43.39,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C6I F62C F134S C158T",4
"lib1","SARS-CoV-2","ACCAATGTGTGATAAC",3,87.09,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C61T N157F G172V",3
"lib1","SARS-CoV-2","ACCAATGTTATTAACG",4,81.96,8.2,-2.56,0.24,1.5,1.12,0.02,">1 nonsynonymous","N30C A33V A105C",3
"lib1","SARS-CoV-2","ACCAATTACCTCATTT",2,36.14,9.21,-1.55,0.13,2.15,1.18,0.01,">1 nonsynonymous","A14L K132I F156V",3
"lib1","SARS-CoV-2","ACCAATTAGACGCGTG",8,77.69,8.7,-2.06,0.11,2.84,1.15,0,">1 nonsynonymous","Y35V Q84R D97S Y119S",4
"lib1","SARS-CoV-2","ACCAATTAGCATATTA",2,15.31,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","V103G Y165M",2
"lib1","SARS-CoV-2","ACCAATTAGTTATTGG",5,1.85,NA,NA,NA,NA,NA,NA,"stop","V37* G51S K87I P96R",4
"lib1","SARS-CoV-2","ACCAATTATACATGAA",2,6.56,6.54,-4.23,1.29,3,1.03,0,">1 nonsynonymous","T55V N64W F70I",3
"lib1","SARS-CoV-2","ACCAATTCAACACTCA",1,16.83,10.22,-0.54,0.1,3,1.02,0.01,">1 nonsynonymous","T140S G152L",2
"lib1","SARS-CoV-2","ACCAATTCCATTCACG",1,9.35,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P54I L111G C158S L183I",4
"lib1","SARS-CoV-2","ACCAATTCGTACTTAT",4,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A33D K56W Q84M P96T N107L S108P",7
"lib1","SARS-CoV-2","ACCAATTGACCACGAA",3,9.71,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","I2F S53H G86S V103T Y119L N171F",6
"lib1","SARS-CoV-2","ACCAATTGACCCGACA",2,0.25,NA,NA,NA,NA,NA,NA,"stop","R16V S45P I142*",3
"lib1","SARS-CoV-2","ACCAATTGAGTAGTTC",2,26.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y121G Y159N",2
"lib1","SARS-CoV-2","ACCAATTGTCCCTTGC",6,65.13,9.68,-1.08,0.14,2.17,1.12,0.01,">1 nonsynonymous","L5Q P96Q K114E",3
"lib1","SARS-CoV-2","ACCAATTGTTCCGATT",2,31.13,10.72,-0.04,0.08,2.89,1.06,0,">1 nonsynonymous","E141A T201S",2
"lib1","SARS-CoV-2","ACCAATTTGGTGACTT",7,36.99,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","T15M N24I S29I F70I",4
"lib1","SARS-CoV-2","ACCAATTTGTTCCGCA",3,51.84,9.18,-1.58,0.11,2.74,1.18,0,">1 nonsynonymous","V32F E154Y",2
"lib1","SARS-CoV-2","ACCACAAAAACGAACA",3,46.98,10,-0.76,0.08,2.68,1,0,">1 nonsynonymous","N4P C31S N110R",3
"lib1","SARS-CoV-2","ACCACAAAACTCGTGG",4,49.73,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L95T T140Q C150T V182E",4
"lib1","SARS-CoV-2","ACCACAAAAGCACAGG",1,4.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","ACCACAACAAACGCGT",4,52.57,10.79,0.03,0.09,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCACAACACAGCATG",3,46.28,7.97,-2.8,0.23,1.5,1.15,0.02,">1 nonsynonymous","C61W S139V G152R",3
"lib1","SARS-CoV-2","ACCACAACTCCCGACA",8,145.19,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","K94D G101W Y119L F156K Y165K",5
"lib1","SARS-CoV-2","ACCACAATAGGGCATT",3,40.67,10.08,-0.69,0.06,2.84,1.04,0,">1 nonsynonymous","V37A A145R",2
"lib1","SARS-CoV-2","ACCACAATCAGCTTCG",4,25.34,6,-4.76,1.91,3,1.09,0,">1 nonsynonymous","C6M P96S Q144H E154I V173S",5
"lib1","SARS-CoV-2","ACCACAATCTAAAAAA",3,7.96,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35S C61N P82A E135S G152N H189N",6
"lib1","SARS-CoV-2","ACCACAATCTTATAAC",2,25.36,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N4Q D97W G116V E135R E141R A190E C195S S200L",8
"lib1","SARS-CoV-2","ACCACAATGGAACATA",6,1.09,NA,NA,NA,NA,NA,NA,"stop","W106* S129N",2
"lib1","SARS-CoV-2","ACCACAATTATTAATG",2,23.38,6.19,-4.57,0.38,3,1.1,0.01,">1 nonsynonymous","F70G P133T",2
"lib1","SARS-CoV-2","ACCACACAAAATAATT",1,5.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135R",1
"lib1","SARS-CoV-2","ACCACACAATCGCCCA",1,7.86,6.51,-4.25,0.95,1.5,1.1,0.01,">1 nonsynonymous","D68N D75V F156K P197L",4
"lib1","SARS-CoV-2","ACCACACAATTCTCTG",2,7.05,11.03,0.26,0.08,3,1.02,0,"1 nonsynonymous","S147D",1
"lib1","SARS-CoV-2","ACCACACACTCAAAAT",11,79.51,10.46,-0.31,0.08,2.81,1.01,0,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","ACCACACAGAAGAGAA",8,40.64,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","E141W C150T",2
"lib1","SARS-CoV-2","ACCACACCGCACAGCG",8,73.47,6.95,-3.82,0.29,1.5,1.16,0.02,"1 nonsynonymous","R179I",1
"lib1","SARS-CoV-2","ACCACACTAGCCATCT",2,11.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N13E N92Y",2
"lib1","SARS-CoV-2","ACCACACTAGTACCAA",5,14.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1L C61Q C102T A192E",4
"lib1","SARS-CoV-2","ACCACACTTGCTTCAT",4,57.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18W C49N D59H",3
"lib1","SARS-CoV-2","ACCACAGAATACCTTG",7,113.75,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L60G Y66N Y91C W106M C150A",5
"lib1","SARS-CoV-2","ACCACAGACGCTTGAA",1,1.11,NA,NA,NA,NA,NA,NA,"stop","C6M S19K L122R R127I T140F P149I F156* V173L",8
"lib1","SARS-CoV-2","ACCACAGACTGCACCG",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S139H",2
"lib1","SARS-CoV-2","ACCACAGCGGCGAATA",6,38.81,6,-4.76,1.76,3,1.08,0,">1 nonsynonymous","K94E W106S L131Q",3
"lib1","SARS-CoV-2","ACCACAGTCAAATTTT",4,149.39,10.08,-0.69,0.06,2.68,1.02,0,">1 nonsynonymous","K26D D90M",2
"lib1","SARS-CoV-2","ACCACAGTGAACCTTT",4,5.16,6,-4.76,2,3,1.04,0,">1 nonsynonymous","Y50R D59V D90Y P96M G172P L183F",6
"lib1","SARS-CoV-2","ACCACAGTTAAGAAAT",3,8.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17V V71M T85R T148C T201Y",5
"lib1","SARS-CoV-2","ACCACATAATGCTCCA",2,1.23,NA,NA,NA,NA,NA,NA,"stop","A14V Y91P I104G P133E P191*",5
"lib1","SARS-CoV-2","ACCACATATTCACACA",2,37.49,10.83,0.07,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCACATCGATATGTA",5,54.66,6.03,-4.73,0.95,1.5,1.15,0.02,">1 nonsynonymous","R25P V37K C61E Y93F N130L C150L Q168I L187F",8
"lib1","SARS-CoV-2","ACCACATCTAAGAACC",6,41.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G83Y P96R Y123I F167S",4
"lib1","SARS-CoV-2","ACCACATGGCTCCATG",10,4.47,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib1","SARS-CoV-2","ACCACATGTACGTACT",2,53.27,6.99,-3.77,0.28,1.5,1.04,0.02,">1 nonsynonymous","Y119A G166Q Y175Q",3
"lib1","SARS-CoV-2","ACCACATTAAAAGAAC",6,124.97,8.56,-2.21,0.08,2.62,1.06,0,">1 nonsynonymous","L5G D90R G166Y",3
"lib1","SARS-CoV-2","ACCACATTAACCTCTA",2,29.91,9.23,-1.54,0.31,1.78,1.19,0.05,">1 nonsynonymous","T148S C158S",2
"lib1","SARS-CoV-2","ACCACATTATACTAGA",2,10.3,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6V T85I W106S Y121E P149L F156M P177T",7
"lib1","SARS-CoV-2","ACCACATTGTCAATAA",3,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V I72L P96M L131V",4
"lib1","SARS-CoV-2","ACCACCAACATCCACG",4,41.95,6,-4.76,2,1.5,1.13,0,"1 nonsynonymous","F99G",1
"lib1","SARS-CoV-2","ACCACCAACCCAGAAA",5,38.65,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N58T G74V R136L",3
"lib1","SARS-CoV-2","ACCACCAACGCGCCGG",3,28.15,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","V37Y L95N S113G",3
"lib1","SARS-CoV-2","ACCACCAACTGAAGAT",2,35.17,6.76,-4,0.26,1.5,1.02,0.02,">1 nonsynonymous","I142L P161Y T201I",3
"lib1","SARS-CoV-2","ACCACCAAGTACATGA",4,34.76,6,-4.76,0.99,1.88,1.13,0.01,">1 nonsynonymous","G83N I88N",2
"lib1","SARS-CoV-2","ACCACCACGACCCTGC",5,92.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36V Y91T R127P P197S",4
"lib1","SARS-CoV-2","ACCACCAGGCTAAACT",1,18.11,8.36,-2.4,0.16,2.68,1.15,0.01,">1 nonsynonymous","T100R Y143S",2
"lib1","SARS-CoV-2","ACCACCAGTCAGTAGT",2,30.38,10.76,0,0.07,2.92,1.04,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","ACCACCAGTTCCTACA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","A33T T85M N120*",3
"lib1","SARS-CoV-2","ACCACCATACAAAAGA",3,65.16,10.45,-0.31,0.05,2.88,1.03,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","ACCACCATCTCGGATT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","T15* W106E G146H",3
"lib1","SARS-CoV-2","ACCACCCAACTGGGAT",9,6.09,8.94,-1.82,0.3,2.38,1.12,0.04,">1 nonsynonymous","K26S N107C Y119N",3
"lib1","SARS-CoV-2","ACCACCCATTGTAACC",11,44.04,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T15K D34G I80S",3
"lib1","SARS-CoV-2","ACCACCCGAAACGGCA",1,18.84,6.02,-4.75,1.39,1.5,1.24,0.04,">1 nonsynonymous","T46N G51V N64L",3
"lib1","SARS-CoV-2","ACCACCCGCTCATTTT",6,1.61,NA,NA,NA,NA,NA,NA,"stop","I138K K198*",2
"lib1","SARS-CoV-2","ACCACCCGTGCAAACT",1,34.53,10.74,-0.02,0.05,2.92,1.02,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","ACCACCGCCATAGCTA",2,83.98,9.91,-0.86,0.08,2.57,1.05,0,">1 nonsynonymous","N24F Y175F",2
"lib1","SARS-CoV-2","ACCACCGCGAAAAGCT",3,12.05,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8A I88N",2
"lib1","SARS-CoV-2","ACCACCGCGGCAATTG",2,14.02,10.57,-0.19,0.06,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCACCGTAACAGTAC",8,89.64,10,-0.77,0.14,1.74,1.09,0.01,">1 nonsynonymous","E10G T148K V173S T201R",4
"lib1","SARS-CoV-2","ACCACCGTTTACATAA",9,85.78,10.78,0.02,0.05,2.9,1.03,0,"1 nonsynonymous","K198C",1
"lib1","SARS-CoV-2","ACCACCTCTAAGTGCC",2,70.74,10.74,-0.02,0.07,2.92,1,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","ACCACCTTAAGCTTAT",1,13.91,9.79,-0.97,0.07,2.88,1.11,0,">1 nonsynonymous","N4K K87E L122W V153S S200E",5
"lib1","SARS-CoV-2","ACCACCTTAAGGCCTA",2,29.32,10.65,-0.12,0.09,2.88,1.09,0,">1 nonsynonymous","N110V K128N",2
"lib1","SARS-CoV-2","ACCACCTTTAAGCGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119P",2
"lib1","SARS-CoV-2","ACCACGAACAACGTGA",9,170.96,10.14,-0.62,0.06,2.8,1.02,0,">1 nonsynonymous","F44C Q163T",2
"lib1","SARS-CoV-2","ACCACGAACTTCAAAC",4,21.92,6.66,-4.11,0.58,1.5,1.26,0.04,">1 nonsynonymous","A89E T100R",2
"lib1","SARS-CoV-2","ACCACGAATAACCCGT",2,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N R25T C49F Y143Q",4
"lib1","SARS-CoV-2","ACCACGAATACACATA",6,0.55,NA,NA,NA,NA,NA,NA,"stop","I104* S147T Q176V",3
"lib1","SARS-CoV-2","ACCACGACGAACTCGC",7,139.48,10.43,-0.33,0.08,2.75,1.04,0,">1 nonsynonymous","K87V N120Q E141D",3
"lib1","SARS-CoV-2","ACCACGAGGCTTGCCT",4,0.73,NA,NA,NA,NA,NA,NA,"stop","A33M S43* D75K D97P S113R P149R V180A",7
"lib1","SARS-CoV-2","ACCACGATTAAAACAG",2,64.01,10.41,-0.35,0.07,2.74,1.1,0,">1 nonsynonymous","T3R L60I I104M I138L",4
"lib1","SARS-CoV-2","ACCACGATTTATTTTA",4,0.34,NA,NA,NA,NA,NA,NA,"stop","N120L Q163L S200*",3
"lib1","SARS-CoV-2","ACCACGCAAACAACCC",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N C49Q",2
"lib1","SARS-CoV-2","ACCACGCAAGGTATTA",3,0.66,NA,NA,NA,NA,NA,NA,"stop","L95C K128M R136*",3
"lib1","SARS-CoV-2","ACCACGCCTAATTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","L131* G166E G174W F185L",4
"lib1","SARS-CoV-2","ACCACGCGAGAGTACC",4,15.56,10.96,0.2,0.21,2.74,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACCACGCGTAACGCAT",6,101.4,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D90M Q168I Q176L",3
"lib1","SARS-CoV-2","ACCACGGAGTACAAGG",3,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R F134P",2
"lib1","SARS-CoV-2","ACCACGGATTCCAAAA",1,2.78,NA,NA,NA,NA,NA,NA,"stop","T3* I28W",2
"lib1","SARS-CoV-2","ACCACGGCAACCATGA",1,25.64,9.92,-0.84,0.14,2.61,1,0.01,">1 nonsynonymous","V37R S53V N107G",3
"lib1","SARS-CoV-2","ACCACGGGCTTCCCGA",9,125.39,9.36,-1.4,0.09,2.01,1.09,0,">1 nonsynonymous","K87M P96V",2
"lib1","SARS-CoV-2","ACCACGGTCAAAAATC",3,88.57,9.79,-0.98,0.05,2.77,1.04,0,">1 nonsynonymous","S41I N118Y",2
"lib1","SARS-CoV-2","ACCACGGTTGGTGGTC",1,10.54,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","F47H I72P",2
"lib1","SARS-CoV-2","ACCACGTAATTGGCTA",7,29.11,6.11,-4.66,1.28,1.5,1.23,0.06,">1 nonsynonymous","C102E K128L V180G",3
"lib1","SARS-CoV-2","ACCACGTATCTGTTAA",5,1.43,NA,NA,NA,NA,NA,NA,"stop","D97Y S113* R179V",3
"lib1","SARS-CoV-2","ACCACGTCTTTTCGGT",2,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R R136P Y143C V173P",4
"lib1","SARS-CoV-2","ACCACGTGAACGTTTC",14,69.07,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V20I A89F I104R C150S",4
"lib1","SARS-CoV-2","ACCACGTGTTCCAATT",7,109.74,10.43,-0.33,0.09,2.72,1.12,0,">1 nonsynonymous","L5E N64K",2
"lib1","SARS-CoV-2","ACCACGTTACTTAAGA",3,16.7,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","G51S D90I G146E",3
"lib1","SARS-CoV-2","ACCACGTTATGATAAC",10,121.6,10.52,-0.24,0.04,2.89,1.03,0,">1 nonsynonymous","T63Y T140L",2
"lib1","SARS-CoV-2","ACCACGTTGCCCCCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","N4A S41R Y66S G83I S129I F156M Q163*",7
"lib1","SARS-CoV-2","ACCACTAAAACCTCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","P54M V65A G74L S113V L183* C195Y",6
"lib1","SARS-CoV-2","ACCACTAACATGCCAC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","F17E N40* R73* G101N",4
"lib1","SARS-CoV-2","ACCACTACCACTTTAT",11,182.68,6.21,-4.56,0.7,1.5,1.21,0.02,">1 nonsynonymous","T63V D98R E154L P169R P177A",5
"lib1","SARS-CoV-2","ACCACTACGATTGACA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","K48P L95* T201V",3
"lib1","SARS-CoV-2","ACCACTACTGATGAAT",9,37.23,9.22,-1.55,0.3,1.5,1,0.05,">1 nonsynonymous","N1L P96I",2
"lib1","SARS-CoV-2","ACCACTAGATACGATC",3,9.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3I T55S C61E E76S F99M W106H",6
"lib1","SARS-CoV-2","ACCACTATAACCATAG",4,100.89,9.62,-1.15,0.05,2.87,1.04,0,">1 nonsynonymous","S113A G155T G174R",3
"lib1","SARS-CoV-2","ACCACTATTTATCATG",2,26.01,10.74,-0.03,0.06,2.88,1.05,0,"1 nonsynonymous","S53F",1
"lib1","SARS-CoV-2","ACCACTCCGAATCTAA",3,79.16,10.86,0.09,0.08,2.83,1.07,0,">1 nonsynonymous","L5T D98T L122S",3
"lib1","SARS-CoV-2","ACCACTCCGCCCACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37D I88D N157T Q163*",4
"lib1","SARS-CoV-2","ACCACTCGAGCCTGTA",2,44.54,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","A89F T140F Y178K",3
"lib1","SARS-CoV-2","ACCACTCTGAAGGCAC",3,44.66,10.74,-0.02,0.05,2.87,1.11,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","ACCACTGACAATATTA",4,17.86,10.81,0.04,0.06,2.92,1.05,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","ACCACTGAGAAGACTA",4,12.38,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","V77Y K94P C102V",3
"lib1","SARS-CoV-2","ACCACTGCGAATATAA",4,66.55,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S129K R136G L162R Q168P",4
"lib1","SARS-CoV-2","ACCACTGGCACACCAA",4,87.8,10.77,0,0.04,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCACTGGCCGCAGTA",6,57.42,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A22L N40W P54H K56T T100S F126M",6
"lib1","SARS-CoV-2","ACCACTGGTAAAAGTC",3,30.2,9.9,-0.87,0.11,2.79,1.01,0,">1 nonsynonymous","C31Y N120R",2
"lib1","SARS-CoV-2","ACCACTGTATTATAAA",2,127.95,9.31,-1.46,0.06,2.55,1.11,0,">1 nonsynonymous","N118T E141L A190S",3
"lib1","SARS-CoV-2","ACCACTTACAACAAAC",4,93.66,8.56,-2.21,0.08,2.92,1.09,0,">1 nonsynonymous","C61M L125E",2
"lib1","SARS-CoV-2","ACCACTTACGTACTAT",1,39.89,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","F8M N107Y Y119M G172L",4
"lib1","SARS-CoV-2","ACCACTTAGATCGCGC",5,36.74,6.26,-4.51,0.48,1.5,1.11,0.01,">1 nonsynonymous","C61F V103E L125C",3
"lib1","SARS-CoV-2","ACCACTTAGCGAGTAC",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D C49D D98G K132P G152Y",5
"lib1","SARS-CoV-2","ACCACTTAGTTTTATA",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L G86H L95K F156V",4
"lib1","SARS-CoV-2","ACCACTTATAAATTTT",2,24.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6V K56M R127W T170G",4
"lib1","SARS-CoV-2","ACCACTTGCGTATATT",3,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E S41N G83E L95P G146F",5
"lib1","SARS-CoV-2","ACCACTTGTAACCGAC",1,28.24,10.06,-0.71,0.09,2.76,1.16,0,">1 nonsynonymous","I2V N40F K114L",3
"lib1","SARS-CoV-2","ACCACTTGTTGAGGCC",7,28.07,10.28,-0.49,0.14,2.38,1.02,0.01,">1 nonsynonymous","A33S R136L",2
"lib1","SARS-CoV-2","ACCACTTTAAGCGCTA",8,82.15,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V32A G83N R127W",3
"lib1","SARS-CoV-2","ACCACTTTAGCTACCA",3,76.25,10.76,-0.01,0.08,2.9,1.06,0,">1 nonsynonymous","D59H S129F P197S",3
"lib1","SARS-CoV-2","ACCAGAAAAAAACTCC",3,45.31,8.46,-2.31,0.14,2.27,1.09,0.01,">1 nonsynonymous","T3C N64L K87R L111T",4
"lib1","SARS-CoV-2","ACCAGAAAAACTTCCC",3,19.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I28P D97F P169K",3
"lib1","SARS-CoV-2","ACCAGAAACCTTTCCC",2,34.76,6.24,-4.52,0.84,1.5,1.13,0.04,">1 nonsynonymous","R124Q Y175I",2
"lib1","SARS-CoV-2","ACCAGAAATATAGCAA",3,30.97,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V32A D90P N107R L188K",4
"lib1","SARS-CoV-2","ACCAGAACATGGGCTA",8,200.98,8.32,-2.45,0.12,2.2,1.1,0.01,">1 nonsynonymous","A67C I142K S147F",3
"lib1","SARS-CoV-2","ACCAGAAGAAAGTCCA",3,28.71,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T55F V103F Y121N P133C",4
"lib1","SARS-CoV-2","ACCAGAATAGAAGTTA",4,48.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y93L G172A",2
"lib1","SARS-CoV-2","ACCAGAATATCAACAA",3,15.31,6.05,-4.72,0.74,1.5,1.08,0.02,">1 nonsynonymous","N107F R136M",2
"lib1","SARS-CoV-2","ACCAGAATGAACACAA",2,12.99,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3R S45C I138D Y165M",4
"lib1","SARS-CoV-2","ACCAGAATGCAGATGT",5,10.05,10.46,-0.31,0.19,2.56,1,0.01,">1 nonsynonymous","T15L D34M T55L",3
"lib1","SARS-CoV-2","ACCAGAATTAACCTAG",1,75.1,9.27,-1.49,0.07,2.82,1.1,0,">1 nonsynonymous","G117R L188K",2
"lib1","SARS-CoV-2","ACCAGACAAATTTTAC",3,20.39,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A14N Y35D G74T N92L",4
"lib1","SARS-CoV-2","ACCAGACAATAAACCA",9,58.75,8,-2.76,0.24,1.58,1.2,0.02,">1 nonsynonymous","A42T T55Y R73S Y121W S129V S184N P197S",7
"lib1","SARS-CoV-2","ACCAGACCGAAACAAG",2,46.59,9.81,-0.95,0.09,2.87,1.02,0,">1 nonsynonymous","T3N P177A",2
"lib1","SARS-CoV-2","ACCAGACCTCGAGCAT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","Y39* I88H W106D L125* V153N",5
"lib1","SARS-CoV-2","ACCAGACGCATACGTA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","D90G D98T I104A E141*",4
"lib1","SARS-CoV-2","ACCAGACTCACCAAAG",7,7.32,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T85F N109A F134D C150S",4
"lib1","SARS-CoV-2","ACCAGACTCGACCCTT",1,14.71,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A33G P82R S139G",3
"lib1","SARS-CoV-2","ACCAGAGAAAGATACG",4,20.18,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N30M V182G",2
"lib1","SARS-CoV-2","ACCAGAGACATCCGGA",5,32.45,7.98,-2.79,0.22,1.5,1.2,0.02,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","ACCAGAGGAACCTTGT",5,62.69,9.59,-1.18,0.11,2.36,1.1,0.01,">1 nonsynonymous","R136S V173G K199R",3
"lib1","SARS-CoV-2","ACCAGATACAAAGTCT",1,28.27,10.73,-0.03,0.06,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAGATATTCGCCTG",3,42.76,9.85,-0.91,0.19,2,1.07,0.02,">1 nonsynonymous","S108M H189R T201D",3
"lib1","SARS-CoV-2","ACCAGATCAAGCACCC",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98Q F126I F156G",3
"lib1","SARS-CoV-2","ACCAGATGACATAATT",7,53.88,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K94R V103W",2
"lib1","SARS-CoV-2","ACCAGATGACGAAAAT",7,36.87,7.35,-3.42,0.33,1.5,1.13,0.04,">1 nonsynonymous","A89D G174N",2
"lib1","SARS-CoV-2","ACCAGATTGTAAAATT",2,33.55,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","T55L A89R S113I",3
"lib1","SARS-CoV-2","ACCAGCAAGGATGAAA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","F8L Y66C V77* Q163S",4
"lib1","SARS-CoV-2","ACCAGCACATTAATAC",2,0.41,NA,NA,NA,NA,NA,NA,"stop","T15P R127K C158*",3
"lib1","SARS-CoV-2","ACCAGCAGAATGCATA",2,15.28,8.97,-1.79,0.17,1.87,1.06,0.01,">1 nonsynonymous","N64V D97S D137S",3
"lib1","SARS-CoV-2","ACCAGCAGCCAAATCA",3,67.51,9.89,-0.87,0.11,1.98,1.09,0,">1 nonsynonymous","Y35N P191I",2
"lib1","SARS-CoV-2","ACCAGCAGTTTAGTTA",1,3.46,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACCAGCATTAAGGCCA",3,32.47,10.14,-0.62,0.11,2.9,1,0,"1 nonsynonymous","S45W",1
"lib1","SARS-CoV-2","ACCAGCCAGGCCTCAA",4,139.23,10.64,-0.12,0.06,2.88,1.09,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","ACCAGCCTGCATCTTT",3,21.9,10.59,-0.18,0.09,2.9,1.06,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","ACCAGCCTTGCTCACC",12,116.56,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A33R D68V N107S R179K",4
"lib1","SARS-CoV-2","ACCAGCGATAATGATG",1,35.95,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P54A C61D P82Q D90V L131N P169A P197A",7
"lib1","SARS-CoV-2","ACCAGCGCAAGCCGAA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","A14L F99H S129A G166L Y178L K199*",6
"lib1","SARS-CoV-2","ACCAGCGCAGGGTGGA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","T15R V37* N64T",3
"lib1","SARS-CoV-2","ACCAGCGCGATACACG",2,64.9,9.18,-1.58,0.09,2.25,1.13,0,">1 nonsynonymous","P54Y Q176L",2
"lib1","SARS-CoV-2","ACCAGCGTACCACCTT",2,1.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153Y",1
"lib1","SARS-CoV-2","ACCAGCTAAATGACGT",2,51.21,10.57,-0.19,0.07,2.87,1.02,0,">1 nonsynonymous","N64K T85A K114T",3
"lib1","SARS-CoV-2","ACCAGCTCTAATCGAG",3,12.8,6,-4.76,2,1.5,1.21,0.03,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","ACCAGCTGCACCAACG",9,24.33,6.69,-4.07,0.62,1.5,1.08,0.05,">1 nonsynonymous","K56L P96F F126M K132R Y165R",5
"lib1","SARS-CoV-2","ACCAGCTTGTTCGCAA",1,147.92,9.16,-1.61,0.12,2.63,1.14,0.01,">1 nonsynonymous","F62L R73Q D90S T201G",4
"lib1","SARS-CoV-2","ACCAGGAACTGATGTA",2,21.72,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","V20K K94G G155L",3
"lib1","SARS-CoV-2","ACCAGGAATCTCAACT",3,44.74,8.65,-2.12,0.26,1.5,1.02,0.03,">1 nonsynonymous","A22E S45K F99L",3
"lib1","SARS-CoV-2","ACCAGGACATGGAACG",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67R T148N",2
"lib1","SARS-CoV-2","ACCAGGACCTTCCAAA",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W W106C C158R Y178D",4
"lib1","SARS-CoV-2","ACCAGGACTGGCAAGT",2,34.52,10.71,-0.05,0.08,2.96,1.01,0,">1 nonsynonymous","E10D T148S",2
"lib1","SARS-CoV-2","ACCAGGATGAGGCACT",2,36.6,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N110I F126P V180L",3
"lib1","SARS-CoV-2","ACCAGGCAATAACTAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y39* D98R V103S G152S",4
"lib1","SARS-CoV-2","ACCAGGCAGTCACCGT",4,6.15,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","K87H Y93M I104S L122S K132L R136K F167K",7
"lib1","SARS-CoV-2","ACCAGGCATGGTACAC",3,38.54,10.2,-0.56,0.04,2.91,1.03,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","ACCAGGCGCAACACAG",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L I80Q G155L Y175C S200Q",5
"lib1","SARS-CoV-2","ACCAGGGAGTTCTTGA",4,0.31,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","ACCAGGGCGTTAAGTG",3,30.49,9.12,-1.64,0.17,1.79,1.15,0.01,"1 nonsynonymous","Y50N",1
"lib1","SARS-CoV-2","ACCAGGGGGTTTTATG",8,59.6,6.17,-4.59,0.64,1.5,1.15,0.01,">1 nonsynonymous","K26M D68W V103R N120S Q144S P149N",6
"lib1","SARS-CoV-2","ACCAGGTAATACTTTA",6,2.42,NA,NA,NA,NA,NA,NA,"stop","R27T V115*",2
"lib1","SARS-CoV-2","ACCAGGTCCCATGGAT",1,7.55,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","T3H F8M I28E N40M P133I C150F Q163I K198Y",8
"lib1","SARS-CoV-2","ACCAGGTCTCTCAAAG",1,16.86,8.05,-2.72,0.4,1.5,1.19,0.04,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ACCAGGTGACCCTTGG",2,50.84,10.56,-0.2,0.06,2.91,1.01,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","ACCAGGTGCGTAAAAG",1,11.91,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","F44Q C61E I88K G152L L183T",5
"lib1","SARS-CoV-2","ACCAGGTTAGTAAGAT",2,95.29,10.79,0.03,0.07,2.88,1.06,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","ACCAGGTTATTAAACT",4,84.57,10.76,0,0.05,2.86,1.05,0,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","ACCAGTAAATACCTTT",2,12.39,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","F99D I142M",2
"lib1","SARS-CoV-2","ACCAGTAAGTTATTAA",2,23.2,10.08,-0.68,0.17,2.73,1,0.01,">1 nonsynonymous","N58I A145S",2
"lib1","SARS-CoV-2","ACCAGTACTAAGTACA",5,27.93,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10L K87Y N118V F167I",4
"lib1","SARS-CoV-2","ACCAGTAGGCAAACCA",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48S S69E L183I",3
"lib1","SARS-CoV-2","ACCAGTAGTAAACCAA",4,24.17,9.43,-1.34,0.15,1.86,1.08,0.01,">1 nonsynonymous","V103I K132L E141L G152T",4
"lib1","SARS-CoV-2","ACCAGTATACCAAAGC",1,43.79,10.59,-0.18,0.03,2.93,1.05,0,"1 nonsynonymous","S139Q",1
"lib1","SARS-CoV-2","ACCAGTATGTCTTTCG",4,55.51,10.77,0.01,0.08,2.95,1.02,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","ACCAGTATTAAACCTG",3,0.53,NA,NA,NA,NA,NA,NA,"stop","G9* T140P",2
"lib1","SARS-CoV-2","ACCAGTCAATACGAAA",6,25.85,10.29,-0.47,0.06,2.82,1.04,0,">1 nonsynonymous","T3R K128I E141G",3
"lib1","SARS-CoV-2","ACCAGTCCACCATAAC",6,110.76,10.62,-0.14,0.06,2.88,1.08,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","ACCAGTCCGTCACGCT",1,8.12,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S113C R127L",2
"lib1","SARS-CoV-2","ACCAGTCGTTGGATCT",20,226.7,10.74,-0.02,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCAGTCTAAAAAACC",5,51.75,6.22,-4.55,0.6,1.5,1.14,0.01,">1 nonsynonymous","C6W K56T F70W Y91K N151M",5
"lib1","SARS-CoV-2","ACCAGTCTTCCCATGT",4,38.91,10.07,-0.69,0.09,2.88,1,0,">1 nonsynonymous","N13S G174E",2
"lib1","SARS-CoV-2","ACCAGTGATGAACACC",3,65.89,10.51,-0.26,0.04,2.97,1,0,">1 nonsynonymous","S36K F185L",2
"lib1","SARS-CoV-2","ACCAGTGATTGTTTTA",6,1.68,NA,NA,NA,NA,NA,NA,"stop","G9V N120S N157R Y175L V180L F185H T201*",7
"lib1","SARS-CoV-2","ACCAGTGCAAAAGTAG",8,66.98,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","P7A N13I Y35P F167G",4
"lib1","SARS-CoV-2","ACCAGTTCCTACTCGC",8,67.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P161R S184D",2
"lib1","SARS-CoV-2","ACCAGTTGTAAAACGT",2,17.25,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","V37S R127S K132A V181Q",4
"lib1","SARS-CoV-2","ACCAGTTTAAAGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55K P96* N120C",3
"lib1","SARS-CoV-2","ACCAGTTTCATCCAGT",5,21.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12T C61R I104P S129P G146V",5
"lib1","SARS-CoV-2","ACCATAAAAAATAGTA",8,55.62,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A14M D34F P54T R78G T100R Y119F Y175S",7
"lib1","SARS-CoV-2","ACCATAAAATTGCGGA",3,20.46,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","I2F I72G G83W D97N V103E E141D",6
"lib1","SARS-CoV-2","ACCATAAACCGAGTGT",4,82.33,8.27,-2.5,0.25,1.85,1.15,0.02,">1 nonsynonymous","F8L Y165S",2
"lib1","SARS-CoV-2","ACCATAAATAAAAAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","S36V Y50Q G116R N157* S164R",5
"lib1","SARS-CoV-2","ACCATAAATGAGCAGT",3,16.06,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","K48F D97F C102Y F167P",4
"lib1","SARS-CoV-2","ACCATAACAGTTTATT",4,34.57,10.1,-0.66,0.05,2.83,1.07,0,">1 nonsynonymous","L5V N120V G155N",3
"lib1","SARS-CoV-2","ACCATAACCTCCTCCC",5,68.81,10.75,-0.01,0.04,2.92,1.05,0,"1 nonsynonymous","T148A",1
"lib1","SARS-CoV-2","ACCATAAGACATGCAC",1,48.53,9.67,-1.1,0.06,2.78,1.09,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","ACCATAAGACTAAAAT",3,7.16,10.78,0.01,0.13,2.93,1,0.01,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","ACCATAAGCCTATAAT",7,87.5,10.47,-0.29,0.04,2.89,1.04,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","ACCATAAGTATAAACA",2,69.43,10.77,0,0.06,2.87,1.09,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","ACCATAAGTTTACGTA",4,29.56,10.63,-0.14,0.07,2.89,1.07,0,">1 nonsynonymous","S43K L60F L183I K198Q",4
"lib1","SARS-CoV-2","ACCATAATAAAAACAT",5,29.53,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","Y35G V103N L122P G172L A192S",5
"lib1","SARS-CoV-2","ACCATAATGAGTTGCT",4,26.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R T55G A81S",3
"lib1","SARS-CoV-2","ACCATAATGCCTATAA",5,48.18,9.96,-0.8,0.1,1.93,1.04,0,">1 nonsynonymous","N30V T140L",2
"lib1","SARS-CoV-2","ACCATAATTAATCAGG",4,47.05,10.63,-0.13,0.06,2.86,1.03,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","ACCATACAAACCCCGT",2,63.12,9.64,-1.13,0.12,1.89,1.04,0.01,">1 nonsynonymous","N4A N13V Q163R",3
"lib1","SARS-CoV-2","ACCATACAAAGCTACA",2,22.1,10.76,-0.01,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATACACTGCCCTC",2,5.74,6.6,-4.16,0.58,1.5,1.1,0.04,">1 nonsynonymous","G74L L122S R179H E186F",4
"lib1","SARS-CoV-2","ACCATACAGATTCCGA",13,137.3,10.8,0.03,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATACATCTCGATG",2,8.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N W106V",2
"lib1","SARS-CoV-2","ACCATACCCAAGAATG",2,75.26,10.75,-0.01,0.06,2.94,1.04,0,">1 nonsynonymous","F8L V37I",2
"lib1","SARS-CoV-2","ACCATACCTGAACACA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","Q84* E135N S184R",3
"lib1","SARS-CoV-2","ACCATACCTGCGATGC",4,43.43,9.99,-0.77,0.11,2.51,1,0,">1 nonsynonymous","K132S V180M",2
"lib1","SARS-CoV-2","ACCATACTTCTAGCTG",2,12.21,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F8Y Y35Q S41A G51V K128P",5
"lib1","SARS-CoV-2","ACCATAGAATTGAGAA",1,54.66,9.54,-1.22,0.15,2.03,1.1,0.01,">1 nonsynonymous","C6T E141W",2
"lib1","SARS-CoV-2","ACCATAGACGATGGCA",3,67.17,9.68,-1.08,0.08,1.89,1.08,0,">1 nonsynonymous","F8Q P54A",2
"lib1","SARS-CoV-2","ACCATAGCGTCAACCT",6,20.11,6.52,-4.24,1.13,1.5,1.09,0.03,">1 nonsynonymous","C6L T100W R179V",3
"lib1","SARS-CoV-2","ACCATAGGAAAGTTTT",1,36.52,10.36,-0.41,0.06,2.95,1.01,0,">1 nonsynonymous","G9L K56M K87H F160S",4
"lib1","SARS-CoV-2","ACCATAGTATACACTC",3,23.74,10.33,-0.43,0.1,2.89,1,0,">1 nonsynonymous","L5G T15V V37I",3
"lib1","SARS-CoV-2","ACCATAGTCCTAGTAT",3,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G A18S Y50H Y121S F126V P149N T201P",7
"lib1","SARS-CoV-2","ACCATAGTCCTTTAGC",3,21.21,6.08,-4.68,0.73,1.5,1.17,0.01,">1 nonsynonymous","A89S V103P",2
"lib1","SARS-CoV-2","ACCATATAACCATGCT",1,28.41,10.91,0.14,0.11,2.88,1.07,0.01,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","ACCATATACCATGATT",1,4.8,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib1","SARS-CoV-2","ACCATATCCAATAGGA",2,26.94,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N64F S139N C158F",3
"lib1","SARS-CoV-2","ACCATATCTAAACCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","K87* Y119A T201R",3
"lib1","SARS-CoV-2","ACCATATCTAAATTAC",2,17.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86R V103E",2
"lib1","SARS-CoV-2","ACCATATGAGGTTGAT",3,33.96,9.84,-0.92,0.12,2.56,1.04,0.01,">1 nonsynonymous","Y35G N40H F160I",3
"lib1","SARS-CoV-2","ACCATATGATCAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N G51V R127E G146D",4
"lib1","SARS-CoV-2","ACCATATTCAAACGGC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","I28S Y121*",2
"lib1","SARS-CoV-2","ACCATATTCATGATTA",9,81.07,10.56,-0.2,0.04,2.92,1,0,"1 nonsynonymous","F12M",1
"lib1","SARS-CoV-2","ACCATATTGGCGACAA",7,90.34,10.74,-0.02,0.05,2.95,1.02,0,"1 nonsynonymous","N58A",1
"lib1","SARS-CoV-2","ACCATATTTAATGTTG",8,49.31,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F44L N92R P177F",3
"lib1","SARS-CoV-2","ACCATATTTATTGATA",3,28.57,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","S29P D90V G117S D137P F156S",5
"lib1","SARS-CoV-2","ACCATATTTGATAACA",1,21.6,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F126S V153L N171L",3
"lib1","SARS-CoV-2","ACCATATTTGTAAAAC",1,12.66,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","F12R A18R I80N N120Q",4
"lib1","SARS-CoV-2","ACCATCAAAACAAACG",2,39.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I72W S113W",2
"lib1","SARS-CoV-2","ACCATCAAAACATTAT",6,51.18,6.25,-4.51,0.64,1.5,1.17,0.02,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","ACCATCAAACCGATTC",1,7.3,6.55,-4.21,0.39,1.5,1.08,0.01,">1 nonsynonymous","A33K N110I C150S T170R V182A",5
"lib1","SARS-CoV-2","ACCATCAAACGAGGAT",8,36.26,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F44H K87N V103L P161L",4
"lib1","SARS-CoV-2","ACCATCAAATGCGTTA",3,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R D112G Y119I C158K",4
"lib1","SARS-CoV-2","ACCATCAAATTCTTAA",4,51.26,10.27,-0.49,0.06,2.35,1.05,0,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","ACCATCACCATTACAA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T T100S E135D F156L K198A",5
"lib1","SARS-CoV-2","ACCATCACTACTAGCA",2,84.87,10.34,-0.43,0.04,2.87,1.04,0,">1 nonsynonymous","A14S T100N",2
"lib1","SARS-CoV-2","ACCATCAGATAGTACC",7,110.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y121R V173T",2
"lib1","SARS-CoV-2","ACCATCAGGCAGTATC",13,170.33,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8T Y39P S139D P161F",4
"lib1","SARS-CoV-2","ACCATCATAACATAAT",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I Y165S P177N",3
"lib1","SARS-CoV-2","ACCATCATGACTCTAC",2,5.68,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L57Y K87L N120Q R136T Y165L",5
"lib1","SARS-CoV-2","ACCATCATTAAGAATT",2,19.43,10.81,0.05,0.1,2.84,1.09,0,"1 nonsynonymous","I2M",1
"lib1","SARS-CoV-2","ACCATCATTCTAGCTT",6,68.97,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V37M A105T Y121D N151S",4
"lib1","SARS-CoV-2","ACCATCCAACCCGGGC",1,57.75,10.83,0.06,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATCCAAGGCCCGC",1,108.16,10.72,-0.05,0.05,2.95,1.01,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","ACCATCCACCAAAGCA",4,47.79,10.4,-0.36,0.06,2.87,1.08,0,"1 nonsynonymous","Y91C",1
"lib1","SARS-CoV-2","ACCATCCATGTCAAAT",5,32.64,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A14G I28L C61M F99N L122G N151T",6
"lib1","SARS-CoV-2","ACCATCCCGAACAATG",1,14.06,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I72G N110Y",2
"lib1","SARS-CoV-2","ACCATCCGCGAGTGCT",3,1.4,NA,NA,NA,NA,NA,NA,"stop","N1* A81D P197S",3
"lib1","SARS-CoV-2","ACCATCCTCCTTAAAT",4,13.09,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L5D D97V C102S L131K",4
"lib1","SARS-CoV-2","ACCATCGATTAGATCA",1,5.01,10.81,0.05,0.15,2.8,1.11,0.01,"1 nonsynonymous","K199P",1
"lib1","SARS-CoV-2","ACCATCGCCCCAAAAC",1,23.15,10.68,-0.08,0.05,3,1,0,"1 nonsynonymous","L38M",1
"lib1","SARS-CoV-2","ACCATCGGCCGTAATA",9,248.72,9.27,-1.49,0.04,2.84,1.09,0,">1 nonsynonymous","N1G N157G",2
"lib1","SARS-CoV-2","ACCATCGGTATCCCAC",7,54.74,10.18,-0.59,0.05,2.82,1.03,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","ACCATCGTTCGAGCCT",5,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T A42D N64D L183T K198V",5
"lib1","SARS-CoV-2","ACCATCGTTGTGCCTA",1,46.73,10.74,-0.03,0.09,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATCTACATACAGG",3,71.08,10.5,-0.27,0.04,2.91,1.03,0,"1 nonsynonymous","Y123A",1
"lib1","SARS-CoV-2","ACCATCTAGTATCAAG",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K K87W T100Q",3
"lib1","SARS-CoV-2","ACCATCTCACTAGATG",5,8.14,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4P N13F A89R",3
"lib1","SARS-CoV-2","ACCATCTCAGCGCTCT",7,26.71,10.85,0.08,0.39,1.99,1.03,0.06,">1 nonsynonymous","F62R L131A",2
"lib1","SARS-CoV-2","ACCATCTCTACTATTT",1,12.5,6,-4.76,0.53,3,1.04,0,">1 nonsynonymous","T85F G86C L122P",3
"lib1","SARS-CoV-2","ACCATCTTGACCCGCA",3,21.54,10.82,0.06,0.11,2.95,1.02,0.01,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","ACCATGAAAAAAAAGA",3,23.51,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","N40I G86M E141Q",3
"lib1","SARS-CoV-2","ACCATGAAAACAGGTT",5,118.04,9.77,-0.99,0.18,1.69,1.18,0.01,">1 nonsynonymous","S36W P96R",2
"lib1","SARS-CoV-2","ACCATGAAGTAGTCTG",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L I88G T148Q",3
"lib1","SARS-CoV-2","ACCATGACCATCAAAG",2,21.8,10.67,-0.1,0.05,2.91,1.01,0,">1 nonsynonymous","K94R G196N",2
"lib1","SARS-CoV-2","ACCATGACCCACAAAT",7,38.18,10.32,-0.45,0.07,2.83,1,0,">1 nonsynonymous","A42Q L60T S147Y Q163F G174S",5
"lib1","SARS-CoV-2","ACCATGACGAAAATAC",6,93.07,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R16W D68G F99L N130R R136I V173S",6
"lib1","SARS-CoV-2","ACCATGAGAGTACCCC",5,76.2,10.77,0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATGATCCCGATGT",3,115.01,10.79,0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATGATGGATCATT",1,48.7,10.93,0.16,0.08,2.93,1.04,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","ACCATGCAGGGGACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","R124P R179*",2
"lib1","SARS-CoV-2","ACCATGCATAATCGAT",3,88.17,10.31,-0.46,0.05,2.69,1,0,">1 nonsynonymous","N13L K56E F62W S129F",4
"lib1","SARS-CoV-2","ACCATGCCCATTTCGC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","S29* D112F Y178* K198G",4
"lib1","SARS-CoV-2","ACCATGCGACTCTCCT",4,22.16,6.47,-4.3,0.42,1.88,1.14,0.02,">1 nonsynonymous","F62N I88H W106K T140F P149R",5
"lib1","SARS-CoV-2","ACCATGCTAGAGTTTG",2,67.73,9.95,-0.81,0.12,2.03,1.08,0.01,">1 nonsynonymous","F12Y T148A",2
"lib1","SARS-CoV-2","ACCATGCTAGTAAATT",11,336.15,9.27,-1.5,0.05,2.89,1.08,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","ACCATGCTCGCATTAA",12,93.48,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y93T T100M N107I L131K",4
"lib1","SARS-CoV-2","ACCATGGACTAAGGAT",10,16.22,6.08,-4.68,0.22,3,1.03,0,">1 nonsynonymous","D59W Q84G A89I R124N",4
"lib1","SARS-CoV-2","ACCATGGATACCTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F47Y K87M D90V S129T Q168* G174V",6
"lib1","SARS-CoV-2","ACCATGTAAGGAGACA",7,64.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R73W V115Y T140C",3
"lib1","SARS-CoV-2","ACCATGTCTAACCAAG",2,16.4,8.91,-1.86,0.11,2.08,1.02,0,">1 nonsynonymous","G9T T15R A105C P149K",4
"lib1","SARS-CoV-2","ACCATGTTAAAAAGCA",1,12.31,10.61,-0.16,0.06,2.98,1,0,"1 nonsynonymous","P191F",1
"lib1","SARS-CoV-2","ACCATGTTAGCTAGCT",2,5.91,6,-4.76,2,3,1.03,0,">1 nonsynonymous","T3M D90K Y121N R127W R136L",5
"lib1","SARS-CoV-2","ACCATTAAAGCTATGA",3,23.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14K G83R C102G N120G",4
"lib1","SARS-CoV-2","ACCATTAAAGTACTTT",3,11.7,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R16I P82G P133V",3
"lib1","SARS-CoV-2","ACCATTAACAGAAACA",1,23.75,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T55S Y93K N151Y Y178L",4
"lib1","SARS-CoV-2","ACCATTAAGTAAACGG",7,99.17,9.8,-0.96,0.07,2.6,1.07,0,">1 nonsynonymous","N58P T148I N171S L183F",4
"lib1","SARS-CoV-2","ACCATTAATAATACCA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","R27P D59* V65T",3
"lib1","SARS-CoV-2","ACCATTAATCCTATTA",2,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W Y91E P191E",3
"lib1","SARS-CoV-2","ACCATTAGAACTAATT",1,1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","ACCATTAGGAAAGTAC",3,8.88,6.36,-4.41,0.6,1.5,1.09,0.03,">1 nonsynonymous","V71L W106N",2
"lib1","SARS-CoV-2","ACCATTAGGACCTAGT",4,85.88,9.05,-1.72,0.12,2.47,1.14,0.01,"1 nonsynonymous","N107M",1
"lib1","SARS-CoV-2","ACCATTAGGGCCCCCA",5,3.42,NA,NA,NA,NA,NA,NA,"stop","K26P K87* C102D",3
"lib1","SARS-CoV-2","ACCATTAGGGCTCTAA",2,47.15,9.88,-0.88,0.07,2.92,1.02,0,">1 nonsynonymous","Q84G Y119K",2
"lib1","SARS-CoV-2","ACCATTAGTAACTCAA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib1","SARS-CoV-2","ACCATTAGTACATCAA",2,1.01,NA,NA,NA,NA,NA,NA,"stop","V77F G152S A192T K199*",4
"lib1","SARS-CoV-2","ACCATTAGTTTCATTA",9,75.47,6.1,-4.67,0.88,1.5,1.24,0.02,">1 nonsynonymous","A18T K94I T140S",3
"lib1","SARS-CoV-2","ACCATTATGACTATGA",5,11.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y35P V103S S200T",3
"lib1","SARS-CoV-2","ACCATTATTGTATTTC",2,16.33,10.44,-0.32,0.11,2.88,1.03,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","ACCATTCATTTATCCC",3,4.21,NA,NA,NA,NA,NA,NA,"stop","A18L A33* S41W K48A",4
"lib1","SARS-CoV-2","ACCATTCCCACCCCCA",1,147.68,10.45,-0.32,0.03,2.91,1.01,0,"1 nonsynonymous","E135K",1
"lib1","SARS-CoV-2","ACCATTCCCATCCTTT",4,70.68,10.84,0.07,0.07,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCATTCCCCGGACAG",2,0.42,NA,NA,NA,NA,NA,NA,"stop","P54* D98S",2
"lib1","SARS-CoV-2","ACCATTCCCGACTTAC",3,29.69,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N24M G51S W106A Y119N",4
"lib1","SARS-CoV-2","ACCATTCCCTTAACGG",2,1,NA,NA,NA,NA,NA,NA,"stop","C6L K87W K132* G155L T170Q T201S",6
"lib1","SARS-CoV-2","ACCATTCCGATTTCTT",7,23.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F17S D98R F167W",3
"lib1","SARS-CoV-2","ACCATTCTAAATCGTT",1,12.63,9.56,-1.2,0.14,2.06,1.06,0.01,">1 nonsynonymous","I2S K87C W106S",3
"lib1","SARS-CoV-2","ACCATTCTAGTTACCA",2,15.86,10.74,-0.02,0.1,2.82,1.12,0,">1 nonsynonymous","N40K T201R",2
"lib1","SARS-CoV-2","ACCATTCTGCAACAGG",1,33.94,10.02,-0.74,0.11,2.33,1.05,0.01,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","ACCATTGCAGCGAGAT",4,17.71,10.96,0.2,0.1,2.93,1.01,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACCATTGCGATAAAAT",9,97.57,10.69,-0.07,0.04,2.92,1.04,0,"1 nonsynonymous","N1I",1
"lib1","SARS-CoV-2","ACCATTGCTAGTAATA",3,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T Y50W N120S S139Y T170F",5
"lib1","SARS-CoV-2","ACCATTGGAGAGACGG",9,2.82,NA,NA,NA,NA,NA,NA,"stop","C6Y A14* C61V K132H S184T",5
"lib1","SARS-CoV-2","ACCATTGGATCACATA",5,71.01,10.16,-0.61,0.06,2.67,1.04,0,"1 nonsynonymous","T15C",1
"lib1","SARS-CoV-2","ACCATTGGATTGCAAA",1,7.71,10.9,0.13,0.2,2.74,1,0.01,">1 nonsynonymous","S147V L162I",2
"lib1","SARS-CoV-2","ACCATTGGCAGCTATT",4,66.73,9.46,-1.31,0.12,1.84,1.12,0.01,">1 nonsynonymous","E10I T55R A81K V173D",4
"lib1","SARS-CoV-2","ACCATTGTTCGAAGCT",1,21.26,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y35L Y123P P197H",3
"lib1","SARS-CoV-2","ACCATTTAAGGAACTT",5,105.89,10.73,-0.04,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATTTAAGGAGCAG",1,37.07,10.77,0,0.07,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCATTTACCCAAGGG",2,2.18,NA,NA,NA,NA,NA,NA,"stop","T3G D34T S43* G146A",4
"lib1","SARS-CoV-2","ACCATTTATGTACTAG",3,107.21,9.9,-0.86,0.04,2.93,1.01,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","ACCATTTCAAAAACAT",1,7.52,9.82,-0.94,0.2,2.94,1.01,0.01,">1 nonsynonymous","N1C T85F",2
"lib1","SARS-CoV-2","ACCATTTCACAATACA",3,22.45,6,-4.76,2,3,1.08,0,">1 nonsynonymous","V32N R73Y I104G",3
"lib1","SARS-CoV-2","ACCATTTGAGTCGTTA",4,1.28,NA,NA,NA,NA,NA,NA,"stop","Y35* S45Y E154N",3
"lib1","SARS-CoV-2","ACCATTTGCGATTGCC",2,45.8,8.67,-2.09,0.12,2.6,1.07,0.01,">1 nonsynonymous","D90T N157S",2
"lib1","SARS-CoV-2","ACCATTTGTAGCTAGG",3,64.3,9.63,-1.13,0.1,1.96,1.09,0,">1 nonsynonymous","G51V L60E",2
"lib1","SARS-CoV-2","ACCATTTTAACACGAT",9,5.81,NA,NA,NA,NA,NA,NA,"stop","C6* Y121K Y178R",3
"lib1","SARS-CoV-2","ACCATTTTATGAAACA",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73L N92L N110C Q144V",4
"lib1","SARS-CoV-2","ACCATTTTCCCCCCAA",6,59.83,8.07,-2.7,0.35,1.5,1.06,0.04,">1 nonsynonymous","V37I D137L",2
"lib1","SARS-CoV-2","ACCATTTTCCGGCGTA",7,95.62,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S113W Y119P G172E",3
"lib1","SARS-CoV-2","ACCATTTTGGAACTTA",2,22.34,10.41,-0.36,0.12,2.71,1.08,0.01,">1 nonsynonymous","G51S Y123K V153D",3
"lib1","SARS-CoV-2","ACCATTTTGGACCCGT",1,15.31,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G86N R124D E141N",3
"lib1","SARS-CoV-2","ACCATTTTTACAGAGC",11,420.98,9.74,-1.03,0.04,2.88,1.03,0,">1 nonsynonymous","N109Y T201Y",2
"lib1","SARS-CoV-2","ACCATTTTTGGTATAC",3,4.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176H",1
"lib1","SARS-CoV-2","ACCCAAAAAATGCGGA",2,26.4,6.2,-4.56,0.42,3,1.22,0.01,">1 nonsynonymous","C6K D137E",2
"lib1","SARS-CoV-2","ACCCAAAAACGTCTAC",3,67.48,10.67,-0.09,0.04,2.95,1.02,0,"1 nonsynonymous","F185L",1
"lib1","SARS-CoV-2","ACCCAAAACCGTCCAA",4,20.34,9.92,-0.85,0.14,2.5,1.02,0.01,">1 nonsynonymous","Y165M V173F",2
"lib1","SARS-CoV-2","ACCCAAAAGCAATCAA",2,26.28,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29R S69M D90R G116H Y123A",5
"lib1","SARS-CoV-2","ACCCAAAATGCGCAGG",5,54.35,6.06,-4.7,0.98,1.5,1.22,0.02,">1 nonsynonymous","G83V S139Q G146V V173T",4
"lib1","SARS-CoV-2","ACCCAAAATGTATAAG",1,407.4,8.71,-2.05,0.35,1.5,1,0.05,">1 nonsynonymous","F12S C49R",2
"lib1","SARS-CoV-2","ACCCAAACCAAGCCAC",2,60.19,10.34,-0.43,0.06,2.84,1.05,0,">1 nonsynonymous","T15V V37G P149S",3
"lib1","SARS-CoV-2","ACCCAAACGATGCACA",7,105.52,7.92,-2.84,0.15,1.79,1.11,0.01,">1 nonsynonymous","N1R F62S Y143S",3
"lib1","SARS-CoV-2","ACCCAAACTAGCCAAG",4,67.48,10.51,-0.25,0.05,2.9,1.02,0,">1 nonsynonymous","S43F G155S T201P",3
"lib1","SARS-CoV-2","ACCCAAACTATCGTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6T K94* G152P P197I",4
"lib1","SARS-CoV-2","ACCCAAAGATACACAT",9,57.21,6.97,-3.79,0.52,1.5,1.13,0.05,">1 nonsynonymous","V11F D112I Y119E",3
"lib1","SARS-CoV-2","ACCCAAAGCTAAACTG",1,20.38,10.86,0.1,0.11,2.82,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACCCAAATAACAGAAA",8,66.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R16L G86D R179G",3
"lib1","SARS-CoV-2","ACCCAAATAGATCATG",6,34.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183H",1
"lib1","SARS-CoV-2","ACCCAAATATAAAGAT",2,2.39,NA,NA,NA,NA,NA,NA,"stop","Y50F L60R G86S G152*",4
"lib1","SARS-CoV-2","ACCCAAATTGAGTAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* D112E N157L",3
"lib1","SARS-CoV-2","ACCCAACAAAGGGAAT",5,131.88,10.72,-0.04,0.03,2.92,1.04,0,"1 nonsynonymous","T63E",1
"lib1","SARS-CoV-2","ACCCAACACCTTCCAC",1,13,10.61,-0.16,0.12,2.85,1.04,0.01,">1 nonsynonymous","A89V Q163V",2
"lib1","SARS-CoV-2","ACCCAACAGCGATTAT",10,134.55,9.77,-0.99,0.13,2.25,1.1,0.01,">1 nonsynonymous","S19E T201R",2
"lib1","SARS-CoV-2","ACCCAACATGTGTCTT",17,176.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V32Q V65K W106L C158F",4
"lib1","SARS-CoV-2","ACCCAACCAATGATGA",1,13.47,11.07,0.31,0.07,2.99,1,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","ACCCAACCCGCACCCA",2,6.78,10.05,-0.71,0.22,2.67,1,0.01,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","ACCCAACCGGATTCAA",1,44.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F S36Q K87M P161L",4
"lib1","SARS-CoV-2","ACCCAACCGTTACCGA",1,10.67,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N58V D90H N107D I138Q",4
"lib1","SARS-CoV-2","ACCCAACCTAAATTTA",1,11.48,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1L A14T R27K Y35L P133L N171A",6
"lib1","SARS-CoV-2","ACCCAACGGCTATCCT",1,27.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96Y A105G Q176Y",3
"lib1","SARS-CoV-2","ACCCAACTAACATCAT",3,3.01,NA,NA,NA,NA,NA,NA,"stop","L60* P197*",2
"lib1","SARS-CoV-2","ACCCAACTAGGGATCT",4,58.23,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64E L162F Q176T",3
"lib1","SARS-CoV-2","ACCCAACTCAAACGGT",4,2.17,NA,NA,NA,NA,NA,NA,"stop","P54V P82M D90* D98S F160Q Q168T",6
"lib1","SARS-CoV-2","ACCCAAGAACACCACA",1,6.74,10.72,-0.04,0.12,3,1.02,0.01,"1 nonsynonymous","S36G",1
"lib1","SARS-CoV-2","ACCCAAGACGAAAATA",3,7.98,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","V103P N110I V153L V180C",4
"lib1","SARS-CoV-2","ACCCAAGCAAACAAAA",1,83.2,10.18,-0.59,0.06,2.85,1.01,0,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","ACCCAAGCTCTTGCGG",3,17.42,8.4,-2.37,0.27,1.5,1.13,0.02,">1 nonsynonymous","V37M P96F",2
"lib1","SARS-CoV-2","ACCCAAGTCCAAGAGA",3,18.63,10.75,-0.01,0.07,2.83,1.13,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","ACCCAATAGGATGACT",1,21.68,9.62,-1.14,0.28,1.58,1.12,0.03,">1 nonsynonymous","T15F A81V",2
"lib1","SARS-CoV-2","ACCCAATATCAATAGA",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K A89D N120F I138L R179I",5
"lib1","SARS-CoV-2","ACCCAATCAATACATT",6,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H L187K",2
"lib1","SARS-CoV-2","ACCCAATCCTGACCAC",2,29.42,10.26,-0.5,0.06,2.9,1.02,0,">1 nonsynonymous","Y35T K114T",2
"lib1","SARS-CoV-2","ACCCAATCGACTCCAT",11,125.08,10.16,-0.6,0.07,2.71,1.02,0,">1 nonsynonymous","F44I L162M",2
"lib1","SARS-CoV-2","ACCCAATCTCAACTCG",2,45.68,10.28,-0.48,0.06,2.9,1,0,"1 nonsynonymous","N13W",1
"lib1","SARS-CoV-2","ACCCAATGTGTATCTT",9,9.33,NA,NA,NA,NA,NA,NA,"stop","I2R N24R P149N C195*",4
"lib1","SARS-CoV-2","ACCCAATTAAAATTAA",4,38.53,6,-4.76,0.64,1.5,1.06,0,">1 nonsynonymous","Y35W G86W D112W G166L",4
"lib1","SARS-CoV-2","ACCCAATTAATATGGA",2,8.27,9.33,-1.43,0.25,1.76,1.11,0.02,">1 nonsynonymous","K56S D137A",2
"lib1","SARS-CoV-2","ACCCAATTAATCGTGG",2,7.89,10.52,-0.25,0.1,2.76,1.21,0.01,">1 nonsynonymous","T55C T201K",2
"lib1","SARS-CoV-2","ACCCAATTCCAGACAG",3,0.36,NA,NA,NA,NA,NA,NA,"stop","F70* A145R N171I",3
"lib1","SARS-CoV-2","ACCCACACATAAACGA",5,60.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6V A18K G51Y P82M F99R Y119L P133A P149V N157T",9
"lib1","SARS-CoV-2","ACCCACACTAAAGATT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V R73S Q144E",3
"lib1","SARS-CoV-2","ACCCACAGAGTCCCAC",16,243.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6E E141R Y175E",3
"lib1","SARS-CoV-2","ACCCACATAAACAAAA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","C31A S41* S45P S129T",4
"lib1","SARS-CoV-2","ACCCACATGCAAAGCC",2,6.08,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","F47L G51Y T100F N107L",4
"lib1","SARS-CoV-2","ACCCACCAACCGGTTT",2,61.69,10.7,-0.07,0.07,2.89,1.07,0,">1 nonsynonymous","D98T Y178F",2
"lib1","SARS-CoV-2","ACCCACCAACGGAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A14Y S36E G146W Y159*",4
"lib1","SARS-CoV-2","ACCCACCAAGTCACCG",6,61.24,9.06,-1.7,0.09,2.01,1.15,0,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","ACCCACCAGGAAAACT",3,60.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I G51A N151K",3
"lib1","SARS-CoV-2","ACCCACCCAAAGGTAC",3,0.17,NA,NA,NA,NA,NA,NA,"stop","N120* L183P",2
"lib1","SARS-CoV-2","ACCCACCCATCGTTGG",4,74.43,10.74,-0.02,0.08,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCACCCCGATAGGC",3,14.48,6.51,-4.26,0.8,1.5,1.16,0.05,">1 nonsynonymous","Y50S D98V V103D Y123F C150F",5
"lib1","SARS-CoV-2","ACCCACCGCAGTCTTA",4,62.9,10.31,-0.46,0.07,2.96,1,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","ACCCACCGTATCTACG",5,65.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E76K K87S N118V",3
"lib1","SARS-CoV-2","ACCCACCTGCCGTTAA",7,77.76,6,-4.76,1.47,1.5,1.15,0.01,">1 nonsynonymous","D59F D68M C102Y P133I",4
"lib1","SARS-CoV-2","ACCCACGACCAGGGGC",7,54.78,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","G86D S113C",2
"lib1","SARS-CoV-2","ACCCACGATAGGCTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46C G155P",2
"lib1","SARS-CoV-2","ACCCACTAATATCGTG",4,17.24,9.41,-1.36,0.19,1.85,1.11,0.01,">1 nonsynonymous","L38N E135M",2
"lib1","SARS-CoV-2","ACCCACTAGAACTATA",4,1.14,NA,NA,NA,NA,NA,NA,"stop","K56P F62S I80* Y159M",4
"lib1","SARS-CoV-2","ACCCACTCAGCAACAC",3,82.56,9.88,-0.88,0.11,2.31,1.04,0,">1 nonsynonymous","N40M N107S",2
"lib1","SARS-CoV-2","ACCCACTCATACAATT",6,61.63,8.52,-2.24,0.17,2.29,1.07,0.01,">1 nonsynonymous","P96N Y119L",2
"lib1","SARS-CoV-2","ACCCACTCATTATGTA",3,38.24,10.7,-0.06,0.03,2.95,1,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","ACCCACTCCACCAGAT",16,2.78,NA,NA,NA,NA,NA,NA,"stop","N107R F167*",2
"lib1","SARS-CoV-2","ACCCACTCTACGCCAA",7,144.9,10.19,-0.57,0.07,2.75,1.02,0,">1 nonsynonymous","F62K K128Y",2
"lib1","SARS-CoV-2","ACCCACTTTATACAAA",6,54.39,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","I88N I138E A145F T201W",4
"lib1","SARS-CoV-2","ACCCAGAAAGGCAGCA",1,14.15,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","W106K N120G D137M P161S",4
"lib1","SARS-CoV-2","ACCCAGAATACACTGA",7,141.84,10.51,-0.25,0.05,2.83,1.02,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","ACCCAGAATACTAGAA",6,11.48,6.99,-3.78,0.53,1.5,1.04,0.06,">1 nonsynonymous","I104P S184T",2
"lib1","SARS-CoV-2","ACCCAGACAGATATAA",7,65.49,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N40T P54R K94L S108P Y175R",5
"lib1","SARS-CoV-2","ACCCAGACTCGTCGTA",1,8.87,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","G9Q G101V F167I",3
"lib1","SARS-CoV-2","ACCCAGATGGATTCTA",5,41.72,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41L L60N L125G F167G Q176R T193Y V194G",7
"lib1","SARS-CoV-2","ACCCAGCATACTGTTG",6,71.68,10.68,-0.08,0.05,2.91,1.05,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","ACCCAGCATGCAAATG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T L57R F99L Y121F N130L N171W",6
"lib1","SARS-CoV-2","ACCCAGCCGCCAAACG",2,38.75,10.84,0.07,0.09,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCAGCCTGTCTTGC",8,1.97,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","ACCCAGCTTTGGCCTG",3,42.51,10.22,-0.55,0.06,2.93,1,0,">1 nonsynonymous","N4E V11L N64L N120H",4
"lib1","SARS-CoV-2","ACCCAGGAAAAGGAGG",2,49.25,10.6,-0.17,0.02,2.95,1.03,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","ACCCAGGACTTGACCG",1,117.85,10.51,-0.25,0.03,2.97,1.01,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","ACCCAGGATTTAAGAT",8,61.2,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V37C F47I S69L G83A Y119W",5
"lib1","SARS-CoV-2","ACCCAGGCAAGCAAAT",5,64.26,10.85,0.08,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCAGGCCAGATTAT",15,2.47,NA,NA,NA,NA,NA,NA,"stop","D98* G155F V182H",3
"lib1","SARS-CoV-2","ACCCAGGCCTTTAACA",12,7.07,NA,NA,NA,NA,NA,NA,"stop","D97K E154* P169F S184M",4
"lib1","SARS-CoV-2","ACCCAGGGGGTCTTTA",10,65.67,8.18,-2.59,0.2,1.5,1.09,0.01,">1 nonsynonymous","N92D D97E",2
"lib1","SARS-CoV-2","ACCCAGGGTCAGGTTT",6,184.65,10.44,-0.33,0.03,2.87,1.04,0,"1 nonsynonymous","Y66S",1
"lib1","SARS-CoV-2","ACCCAGGTCTATTATC",3,18.75,10.72,-0.04,0.09,2.97,1.05,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","ACCCAGTAATCTACGC",3,15.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L Y93L",2
"lib1","SARS-CoV-2","ACCCAGTAGTCTAAAA",6,70.47,10.81,0.05,0.08,2.92,1.02,0,"1 nonsynonymous","I28W",1
"lib1","SARS-CoV-2","ACCCAGTTATTCGAAC",2,61.48,10.34,-0.42,0.05,2.92,1,0,">1 nonsynonymous","L5V T55L N151P",3
"lib1","SARS-CoV-2","ACCCAGTTGCTAACAA",1,53.31,10.1,-0.67,0.09,2.75,1,0,">1 nonsynonymous","D59P G83F",2
"lib1","SARS-CoV-2","ACCCATAAATTGCACA",1,5.67,6,-4.76,2,1.5,1.4,0.05,">1 nonsynonymous","Q84E C102G",2
"lib1","SARS-CoV-2","ACCCATAATATACTTG",2,34.81,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K87G N120T R136Y G174F",4
"lib1","SARS-CoV-2","ACCCATAATCTGAAAC",1,0.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","ACCCATACAAACAGCT",10,53.26,7.33,-3.43,0.37,1.5,1.1,0.03,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","ACCCATACAGGAATAA",1,13.78,10.2,-0.57,0.14,2.89,1.06,0.01,">1 nonsynonymous","R16H S36V I142Y",3
"lib1","SARS-CoV-2","ACCCATACCTATAGTT",1,2.66,NA,NA,NA,NA,NA,NA,"stop","W106* P177D",2
"lib1","SARS-CoV-2","ACCCATAGTATAATAG",5,142.29,9.55,-1.21,0.05,2.86,1.07,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","ACCCATAGTGTGATAA",5,2.67,NA,NA,NA,NA,NA,NA,"stop","C49D L122* E141V F185L",4
"lib1","SARS-CoV-2","ACCCATATAGAATGTT",5,61.24,10.33,-0.43,0.05,2.91,1,0,">1 nonsynonymous","D98A I104Y I142M",3
"lib1","SARS-CoV-2","ACCCATATTCGCGGTG",15,5.02,NA,NA,NA,NA,NA,NA,"stop","P7C S113A G166*",3
"lib1","SARS-CoV-2","ACCCATATTCTTCTTA",1,26.73,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A81P N157F T201K",3
"lib1","SARS-CoV-2","ACCCATCATACCCGTC",3,18.26,10.46,-0.3,0.06,2.94,1,0,">1 nonsynonymous","F134Q E141S",2
"lib1","SARS-CoV-2","ACCCATCATAGATTTA",2,37.37,10.83,0.06,0.06,2.99,1,0,"1 nonsynonymous","P197L",1
"lib1","SARS-CoV-2","ACCCATCATGAGCCAC",1,6.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R K128G P149C",3
"lib1","SARS-CoV-2","ACCCATCTACTGGCCT",1,1.07,NA,NA,NA,NA,NA,NA,"stop","L5C C61P L122*",3
"lib1","SARS-CoV-2","ACCCATCTGCATCCCT",1,71.41,9.78,-0.99,0.11,1.97,1.07,0,">1 nonsynonymous","S69L N151D",2
"lib1","SARS-CoV-2","ACCCATCTGCATTTGC",4,64.84,10.29,-0.48,0.08,2.68,1.02,0,">1 nonsynonymous","T3M S29L",2
"lib1","SARS-CoV-2","ACCCATCTGGAGAAAT",5,116.19,9.89,-0.88,0.12,2.14,1.06,0.01,">1 nonsynonymous","G83K C102L",2
"lib1","SARS-CoV-2","ACCCATGAACAACAAA",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M N130F R136S I142R S164Y",5
"lib1","SARS-CoV-2","ACCCATGACACTGATA",3,23.52,6.72,-4.05,0.37,2.02,1.26,0.02,">1 nonsynonymous","G9K N107P S113I",3
"lib1","SARS-CoV-2","ACCCATGATAAAAAGT",2,63.85,10.03,-0.73,0.05,2.79,1.02,0,">1 nonsynonymous","N4R S36E N92S",3
"lib1","SARS-CoV-2","ACCCATGATAGCAACA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","F12L I28E Y121*",3
"lib1","SARS-CoV-2","ACCCATGCAGGTGAAA",3,69.47,10.04,-0.72,0.06,2.81,1.01,0,">1 nonsynonymous","N107A I142L",2
"lib1","SARS-CoV-2","ACCCATGCCACGCATT",1,21.78,9.73,-1.04,0.08,2.7,1.08,0,">1 nonsynonymous","C6M L187S",2
"lib1","SARS-CoV-2","ACCCATGGACCAGAAA",6,100.22,10.72,-0.04,0.06,2.89,1.04,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","ACCCATGGGCCCCCTT",1,20.95,9.6,-1.16,0.46,1.5,1,0.08,">1 nonsynonymous","I2L C6Y D97K W106K V173F",5
"lib1","SARS-CoV-2","ACCCATGTATAAAAAA",5,39.33,6.09,-4.67,1.22,1.5,1.31,0.04,">1 nonsynonymous","V11S G83V",2
"lib1","SARS-CoV-2","ACCCATGTGAGATTCT",2,37.15,6,-4.76,0.36,2.6,1.1,0,">1 nonsynonymous","L95F Y123T",2
"lib1","SARS-CoV-2","ACCCATGTGCGGATAC",14,68.68,6,-4.76,0.83,1.5,1.2,0.01,">1 nonsynonymous","C6G F44C V65R",3
"lib1","SARS-CoV-2","ACCCATGTTAAAAGAT",3,15.18,8.37,-2.4,0.19,2.05,1.06,0.02,">1 nonsynonymous","V37S D112M K199T",3
"lib1","SARS-CoV-2","ACCCATTAAAACTCTA",5,44.9,9.76,-1,0.11,2.13,1.04,0.01,">1 nonsynonymous","L38N C61T Y66W T201S",4
"lib1","SARS-CoV-2","ACCCATTAACTGATAG",1,4.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","ACCCATTACCGGGGGG",5,73.83,10.7,-0.07,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCATTATAGTTGTA",3,23.15,8.14,-2.63,0.24,1.51,1.19,0.02,">1 nonsynonymous","N107I S139T G146S",3
"lib1","SARS-CoV-2","ACCCATTCCATGTATG",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P C49D K87Y",3
"lib1","SARS-CoV-2","ACCCATTTGAATGGAA",4,49.27,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y91P K132N",2
"lib1","SARS-CoV-2","ACCCATTTTATCAGGT",10,158.81,10.75,-0.01,0.07,2.94,1.04,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","ACCCCAAAACTCGGTT",1,8.13,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","C6L P7H V103E Y165V",4
"lib1","SARS-CoV-2","ACCCCAAAATGATTGC",4,0,NA,NA,NA,NA,NA,NA,"stop","I2F G9V N64A D112* V153*",5
"lib1","SARS-CoV-2","ACCCCAAACACATATT",1,21.78,10.73,-0.03,0.09,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCCCAAAGATGGCGT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","V37L G86K L131*",3
"lib1","SARS-CoV-2","ACCCCAAGGTTATCCG",3,57.57,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D34A D112P Y123T",3
"lib1","SARS-CoV-2","ACCCCAAGTCGACAGA",1,1.85,NA,NA,NA,NA,NA,NA,"stop","N171C Q176*",2
"lib1","SARS-CoV-2","ACCCCAATATTATCCT",5,121.07,10.14,-0.62,0.05,2.95,1.01,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","ACCCCAATTAACATAC",3,6.18,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","G9Q N64L A89H D98H G116F K128L",6
"lib1","SARS-CoV-2","ACCCCACAATATTTAA",1,5.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G T55I D97F K128F",4
"lib1","SARS-CoV-2","ACCCCACAGTAAGAAC",5,62.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S129G P177R",2
"lib1","SARS-CoV-2","ACCCCACCAATACACC",2,28.77,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","W23A W106P D137R",3
"lib1","SARS-CoV-2","ACCCCACCTCAACACA",1,28.57,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R16Y N92F D98S",3
"lib1","SARS-CoV-2","ACCCCACGAGATATAT",9,84.88,10.09,-0.67,0.03,2.81,1.07,0,">1 nonsynonymous","Y121M E141T",2
"lib1","SARS-CoV-2","ACCCCACGCTTACTTA",4,6.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L38H T85Y D98V W106L P133L Y178N",6
"lib1","SARS-CoV-2","ACCCCACGGAATCTAC",10,57.88,6.05,-4.71,0.82,1.5,1.19,0.02,">1 nonsynonymous","F17E N40K V103R",3
"lib1","SARS-CoV-2","ACCCCACTATGTTAAA",3,9.82,6,-4.76,1.92,3,1.07,0.01,">1 nonsynonymous","P7Y W23M L57P N92G Y121D E141K",6
"lib1","SARS-CoV-2","ACCCCACTGCTCACAT",3,72.04,8.57,-2.19,0.26,1.5,1.11,0.03,"1 nonsynonymous","R25V",1
"lib1","SARS-CoV-2","ACCCCACTTCCCGACA",7,8.54,NA,NA,NA,NA,NA,NA,"stop","G86* G116K I138R G146M E154D",5
"lib1","SARS-CoV-2","ACCCCAGAAAGTAGTA",2,37.45,10.04,-0.72,0.04,2.89,1.03,0,">1 nonsynonymous","I138R F185L",2
"lib1","SARS-CoV-2","ACCCCAGATGGCACCA",1,26.19,6,-4.76,2,3,1.19,0,">1 nonsynonymous","D90S S113G I142G F156M",4
"lib1","SARS-CoV-2","ACCCCAGATTATGTAT",6,23.39,8.3,-2.47,0.46,1.5,1,0.08,">1 nonsynonymous","A14K A42P Y91L D98S W106L E154L",6
"lib1","SARS-CoV-2","ACCCCAGCTTGATCCT",1,27.47,10.46,-0.3,0.05,2.93,1,0,">1 nonsynonymous","T15M F160H",2
"lib1","SARS-CoV-2","ACCCCAGTCGCTAGTT",5,141.35,10.77,0.01,0.06,2.9,1.06,0,"1 nonsynonymous","L5A",1
"lib1","SARS-CoV-2","ACCCCAGTGCCTCGCT",1,28.26,10.69,-0.07,0.09,2.85,1.08,0,">1 nonsynonymous","T15S R27C Y123K",3
"lib1","SARS-CoV-2","ACCCCATAACACAGGT",4,25.83,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37K K94I D112T F134N T201L",5
"lib1","SARS-CoV-2","ACCCCATAATAAACCC",5,52.8,10.12,-0.64,0.13,2.29,1,0.01,">1 nonsynonymous","A14C V103I",2
"lib1","SARS-CoV-2","ACCCCATACCATCATG",2,2.39,NA,NA,NA,NA,NA,NA,"stop","C49A D97I G117* K199T",4
"lib1","SARS-CoV-2","ACCCCATATCTGCTTC",6,2.33,NA,NA,NA,NA,NA,NA,"stop","D90E C195*",2
"lib1","SARS-CoV-2","ACCCCATGACACCAGT",8,1.39,NA,NA,NA,NA,NA,NA,"stop","T3A E10V R25C A33S A42N R127K T140* E154F K198Y",9
"lib1","SARS-CoV-2","ACCCCATTAATAATTT",5,23.74,6,-4.76,2,1.5,1.45,0.07,">1 nonsynonymous","P7C T55H I88K D98K E141T",5
"lib1","SARS-CoV-2","ACCCCATTCTCTCTAA",1,44.05,10.06,-0.71,0.1,2.74,1.01,0,">1 nonsynonymous","C61V R127S",2
"lib1","SARS-CoV-2","ACCCCCAAGAAATAAG",2,15.22,10.89,0.13,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCCCAATTAAAATG",4,61.05,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F70L R78F N120S Q163R",4
"lib1","SARS-CoV-2","ACCCCCACAAAAAACA",4,19.14,10.49,-0.27,0.09,2.88,1.06,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","ACCCCCACAAAGTCCA",4,14.49,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","F17S I72N N92V I104G V173Q L183Q",6
"lib1","SARS-CoV-2","ACCCCCAGAGGGACCG",4,35.32,7.34,-3.43,0.27,1.5,1.13,0.02,">1 nonsynonymous","Y91G D137N",2
"lib1","SARS-CoV-2","ACCCCCATAGAATAAT",4,6.15,9.78,-0.98,0.46,1.5,1,0.03,">1 nonsynonymous","D98P W106T S200T",3
"lib1","SARS-CoV-2","ACCCCCATCATTTAAA",9,80.14,10.82,0.05,0.05,2.9,1.06,0,">1 nonsynonymous","T3M Q168A",2
"lib1","SARS-CoV-2","ACCCCCATTGTCTGCC",2,40.12,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6G V37R D68M P82F F126V T170Y",6
"lib1","SARS-CoV-2","ACCCCCCACAAACTCG",3,44.1,10.49,-0.27,0.06,2.94,1,0,">1 nonsynonymous","K56T F134D",2
"lib1","SARS-CoV-2","ACCCCCCACGTACTAG",1,6.66,10.04,-0.73,0.26,2.44,1,0.02,">1 nonsynonymous","A81S D90H",2
"lib1","SARS-CoV-2","ACCCCCCCGAGGGTAC",3,60.01,10.63,-0.13,0.07,2.88,1.1,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","ACCCCCCCTAATTGCA",13,3.85,NA,NA,NA,NA,NA,NA,"stop","G86H P96* C102H G166N",4
"lib1","SARS-CoV-2","ACCCCCCTCACTTGCG",8,2.1,NA,NA,NA,NA,NA,NA,"stop","T63A Q84W V180*",3
"lib1","SARS-CoV-2","ACCCCCGAAAGCAAAT",2,102.9,10.79,0.02,0.05,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCCCGCAGCCTATA",7,81.22,8.82,-1.94,0.07,2.63,1.15,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","ACCCCCGCCCACTCAC",1,0.35,NA,NA,NA,NA,NA,NA,"stop","G9* P82Q L122P K132Q I142L",5
"lib1","SARS-CoV-2","ACCCCCGCGACTTACC",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103Y N110W",2
"lib1","SARS-CoV-2","ACCCCCGCGCCAGGAC",2,14.28,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I80K Q84K F99L",3
"lib1","SARS-CoV-2","ACCCCCGGACTTGTAT",4,24.94,7.9,-2.86,0.41,1.5,1.16,0.05,">1 nonsynonymous","C49F L57H T201R",3
"lib1","SARS-CoV-2","ACCCCCGTACTACGAC",2,40.62,10.54,-0.22,0.05,2.88,1.05,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","ACCCCCTAAACTACAC",3,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S C102R R136Y",3
"lib1","SARS-CoV-2","ACCCCCTACACCAAAT",2,9.4,6.9,-3.86,0.87,1.5,1.12,0.05,">1 nonsynonymous","Y93W Y178S",2
"lib1","SARS-CoV-2","ACCCCCTATCTTTACT",2,0,NA,NA,NA,NA,NA,NA,"stop","V32* G51I C61N",3
"lib1","SARS-CoV-2","ACCCCCTCATGTGTGT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","F44S L95*",2
"lib1","SARS-CoV-2","ACCCCCTCCACCAAGC",2,66.16,10.37,-0.39,0.05,2.94,1.05,0,"1 nonsynonymous","T170Q",1
"lib1","SARS-CoV-2","ACCCCCTCCACCGAAA",10,205.39,8.46,-2.3,0.19,1.75,1.13,0.01,">1 nonsynonymous","S41T Y165C",2
"lib1","SARS-CoV-2","ACCCCCTCGAACTTCA",4,63.3,9.7,-1.06,0.08,2.81,1.04,0,">1 nonsynonymous","K87D T193I",2
"lib1","SARS-CoV-2","ACCCCCTCTCTGAAAC",2,36.52,10.69,-0.08,0.04,2.92,1,0,">1 nonsynonymous","L5G E141A",2
"lib1","SARS-CoV-2","ACCCCCTGCATGCATA",2,26.34,6.38,-4.38,0.57,1.5,1.12,0.02,">1 nonsynonymous","R124Q G166V",2
"lib1","SARS-CoV-2","ACCCCCTGCCCTTTAG",4,90.47,6.08,-4.69,1.07,1.5,1.23,0.03,">1 nonsynonymous","Y35S T85F P177S",3
"lib1","SARS-CoV-2","ACCCCCTGGAGCATAA",1,23.73,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","I2Q L95D",2
"lib1","SARS-CoV-2","ACCCCCTTCCATTAAC",4,0.42,NA,NA,NA,NA,NA,NA,"stop","A42L G83* V173A",3
"lib1","SARS-CoV-2","ACCCCCTTTTCGAGAT",1,9.36,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","C49K T55M N64G G116P R124T N157V",6
"lib1","SARS-CoV-2","ACCCCGAACACACCAT",2,31.13,10.7,-0.06,0.07,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCCCGAAGAAATCGA",2,27.46,6,-4.76,2,3,1.16,0,">1 nonsynonymous","T15V F126S G174C",3
"lib1","SARS-CoV-2","ACCCCGAATAAAAACC",4,73.52,9.59,-1.18,0.11,2.72,1.09,0,">1 nonsynonymous","N64L Y119R N151F",3
"lib1","SARS-CoV-2","ACCCCGACTCTCACCA",2,42.69,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V11S D137G",2
"lib1","SARS-CoV-2","ACCCCGAGATGAAGTA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","S19L S29C F99* L122V C150T C158A",6
"lib1","SARS-CoV-2","ACCCCGATCCAGTCTT",5,30.56,10.82,0.06,0.07,2.98,1,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","ACCCCGCAACCCGGCC",14,33.22,6.96,-3.81,0.5,1.5,1.16,0.07,">1 nonsynonymous","C6T A33L K87I L125H N151R Q176I F185N",7
"lib1","SARS-CoV-2","ACCCCGCCAGAACAGA",6,1.36,NA,NA,NA,NA,NA,NA,"stop","R78S W106V Y119* G174*",4
"lib1","SARS-CoV-2","ACCCCGCCCTTACCTA",3,37.17,10.1,-0.67,0.08,2.78,1,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","ACCCCGCCTTATAACC",5,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S N30Y G51W V103R N107Q P161M K199N",7
"lib1","SARS-CoV-2","ACCCCGCTAGGCGTAA",4,24.47,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","P7S Y66C I72F I80M G86V P149L",6
"lib1","SARS-CoV-2","ACCCCGCTCCCAAGCA",1,41.18,8.78,-1.98,0.22,1.5,1.18,0.02,">1 nonsynonymous","I2Y R136P F160S",3
"lib1","SARS-CoV-2","ACCCCGCTTCAACGTA",8,138.36,8.67,-2.1,0.07,2.81,1.08,0,">1 nonsynonymous","P96R G116E L125N",3
"lib1","SARS-CoV-2","ACCCCGGAAATTTGAT",3,9.16,7.62,-3.14,0.16,1.5,1.08,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ACCCCGGACATTGACT",1,15.37,8.31,-2.45,0.17,2.98,1,0.01,">1 nonsynonymous","T55G Y143S",2
"lib1","SARS-CoV-2","ACCCCGGCGTATTAAA",1,37.47,10.26,-0.51,0.07,2.94,1.01,0,">1 nonsynonymous","D90Y T148H",2
"lib1","SARS-CoV-2","ACCCCGGGAATCTATT",2,33.77,7.76,-3.01,0.21,1.54,1.1,0.02,">1 nonsynonymous","Y35I V153T G174H L183A",4
"lib1","SARS-CoV-2","ACCCCGGTCCACACAA",2,75.26,8.51,-2.26,0.13,2.28,1.06,0.01,">1 nonsynonymous","K48S Y119G L162M",3
"lib1","SARS-CoV-2","ACCCCGGTCTCAGGCC",3,28.11,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F62I Y91H Y123N C158R",4
"lib1","SARS-CoV-2","ACCCCGGTTCGCACCA",3,14.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E F62W I104Q E141A",4
"lib1","SARS-CoV-2","ACCCCGTAACGAACAC",2,38.2,10.65,-0.11,0.12,2.7,1.03,0.01,"1 nonsynonymous","V153R",1
"lib1","SARS-CoV-2","ACCCCTAACAATAATT",3,92.75,10.76,0,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCCTAAGAAAAGAC",5,69.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G51F L95T",2
"lib1","SARS-CoV-2","ACCCCTAAGACAGCAA",2,9.18,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C6V W23R F70I",3
"lib1","SARS-CoV-2","ACCCCTAAGGAACACG",3,41.14,10.83,0.06,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCCTAATACCCACA",5,62.17,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K94T N110Y R136Y",3
"lib1","SARS-CoV-2","ACCCCTAATCTCCATG",4,38.92,10.7,-0.06,0.1,2.84,1.11,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","ACCCCTACAATTGTGA",4,79.63,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10Y Y35Q D59E F70I T85K D97L Y143V F160A Y178W",9
"lib1","SARS-CoV-2","ACCCCTACCCAGCTGT",3,14.29,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V37N R127L Q144L",3
"lib1","SARS-CoV-2","ACCCCTAGGGCCAATC",1,19.35,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2T T46S L60K Y91S N120P",5
"lib1","SARS-CoV-2","ACCCCTAGTTAGACCT",11,4.58,NA,NA,NA,NA,NA,NA,"stop","V77Q W106G S113L L122I L131T P161L F167G Y178*",8
"lib1","SARS-CoV-2","ACCCCTATACTAAAAG",12,104.39,9.91,-0.85,0.12,2.09,1.07,0,">1 nonsynonymous","F8M F134V",2
"lib1","SARS-CoV-2","ACCCCTATATGCCGGC",2,9.91,7.24,-3.52,0.28,1.5,1.07,0.02,">1 nonsynonymous","T63P D137V",2
"lib1","SARS-CoV-2","ACCCCTCCATGCAATG",5,29.42,6,-4.76,1.76,1.5,1.2,0.03,">1 nonsynonymous","A42R D59L Q84S T100L S129V S139R C158F",7
"lib1","SARS-CoV-2","ACCCCTCCCAAACCAC",6,87.75,10.7,-0.06,0.07,2.91,1.05,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","ACCCCTCGAAACACGT",3,36.76,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","E10G A18L T46A F99D V103A P133C L183C V194A",8
"lib1","SARS-CoV-2","ACCCCTCGAGGTCAGT",3,19.69,9.72,-1.04,0.31,1.76,1.07,0.04,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","ACCCCTCTGACTTGCA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R G51I W106S",3
"lib1","SARS-CoV-2","ACCCCTGATAGACGTA",8,220.87,10.35,-0.42,0.04,2.93,1.02,0,">1 nonsynonymous","V153E G174K",2
"lib1","SARS-CoV-2","ACCCCTGCATAGTTAT",5,128.17,10.61,-0.15,0.05,2.92,1.04,0,">1 nonsynonymous","A33G E141N S200H",3
"lib1","SARS-CoV-2","ACCCCTGGGGGCGCAC",5,66.04,9.6,-1.16,0.1,2.01,1.09,0,">1 nonsynonymous","T55I T63S D98I G155M",4
"lib1","SARS-CoV-2","ACCCCTGTCGGATATT",5,84.67,10.66,-0.1,0.04,2.93,1.05,0,">1 nonsynonymous","F62A G83Y K114A",3
"lib1","SARS-CoV-2","ACCCCTGTTTATACCC",2,7.88,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C31M P96M G117Q L183R",4
"lib1","SARS-CoV-2","ACCCCTTCGTAGCGCC",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V P82M P96H",3
"lib1","SARS-CoV-2","ACCCCTTGCGAATTAT",2,7.82,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","F44W K56F F62T G83T P96L",5
"lib1","SARS-CoV-2","ACCCGAAAAACAGGTG",2,62.88,8.44,-2.33,0.18,2.54,1.08,0.01,"1 nonsynonymous","Y175L",1
"lib1","SARS-CoV-2","ACCCGAAAACATACGT",1,0.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","ACCCGAACGTACTAAG",2,31.93,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Y50I P82M W106Y R127D",4
"lib1","SARS-CoV-2","ACCCGAACTCCATACT",8,63.78,9.98,-0.78,0.05,2.92,1,0,">1 nonsynonymous","C6M R16T K114A S200P",4
"lib1","SARS-CoV-2","ACCCGAATATAACACG",2,57.99,10.38,-0.38,0.04,2.92,1.05,0,">1 nonsynonymous","R27L V37I I72C",3
"lib1","SARS-CoV-2","ACCCGAATTCATATGA",15,94.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P7W D59K Y119A R127S Y178C",5
"lib1","SARS-CoV-2","ACCCGACCCACTAGGC",3,83.77,10.63,-0.13,0.03,2.92,1,0,">1 nonsynonymous","I2K D90S K114T S147T",4
"lib1","SARS-CoV-2","ACCCGACCGGTACTAT",2,19.46,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N4I V37M D90A L95F G101V K199M",6
"lib1","SARS-CoV-2","ACCCGACGCAATGGTT",1,4.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","ACCCGAGAGGATAATT",2,37.83,9.92,-0.85,0.13,2.26,1.02,0.01,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","ACCCGATAATTCTTCC",2,22.66,6,-4.76,0.45,3,1.03,0,">1 nonsynonymous","S41K D68F F126N G196N",4
"lib1","SARS-CoV-2","ACCCGATAATTGACAG",1,18.25,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A42V N92G L131F G146C",4
"lib1","SARS-CoV-2","ACCCGATACATGTCTG",3,12.43,6.49,-4.28,0.44,1.5,1.11,0.01,">1 nonsynonymous","T15Y Y91S I138T C150S",4
"lib1","SARS-CoV-2","ACCCGATACCATTAAT",6,78.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L57Y P177G",2
"lib1","SARS-CoV-2","ACCCGATCGTGCGGCA",6,217.94,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5F A14F G51K A105L N151R",5
"lib1","SARS-CoV-2","ACCCGATGGAGACCTG",8,69.55,10.24,-0.52,0.06,2.73,1.01,0,"1 nonsynonymous","A81H",1
"lib1","SARS-CoV-2","ACCCGATTAAGAGAAT",1,32.22,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T55N Y93K W106M G155V",4
"lib1","SARS-CoV-2","ACCCGCAAAAACGAAT",8,219.92,10.31,-0.46,0.04,2.86,1,0,">1 nonsynonymous","P7S Y123C",2
"lib1","SARS-CoV-2","ACCCGCAAAATCCGCG",1,5.37,7.4,-3.36,0.22,1.91,1,0.02,">1 nonsynonymous","S19N G86S Y119C",3
"lib1","SARS-CoV-2","ACCCGCAAAGATCCCA",7,0,NA,NA,NA,NA,NA,NA,"stop","N58S N92* K199L",3
"lib1","SARS-CoV-2","ACCCGCAAAGTTAAGT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","Y39* G83S",2
"lib1","SARS-CoV-2","ACCCGCAAGCGACGAG",3,58.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F70T N120C L131W",3
"lib1","SARS-CoV-2","ACCCGCACACGACCGA",1,6.17,8.76,-2.01,0.31,1.5,1.34,0.03,">1 nonsynonymous","I88A T100R",2
"lib1","SARS-CoV-2","ACCCGCATAACTAACT",13,163.57,9.95,-0.82,0.08,2.41,1.02,0,">1 nonsynonymous","S53F I104C N120A",3
"lib1","SARS-CoV-2","ACCCGCCATGGAAAAA",3,48.07,9.62,-1.14,0.12,2.59,1.21,0.01,">1 nonsynonymous","P7S N157K",2
"lib1","SARS-CoV-2","ACCCGCCCAAACATGA",2,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I F62G",2
"lib1","SARS-CoV-2","ACCCGCCCCCTAACCC",4,37.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3H D68V G117D",3
"lib1","SARS-CoV-2","ACCCGCCCTACCTGCC",1,34.64,9.76,-1,0.15,1.95,1.17,0.01,">1 nonsynonymous","T55K L95V F99I T140Q",4
"lib1","SARS-CoV-2","ACCCGCCTCTACGATG",6,109.03,9.68,-1.09,0.06,2.87,1.08,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","ACCCGCCTCTTACCGT",3,1.01,NA,NA,NA,NA,NA,NA,"stop","E10A F70T L125*",3
"lib1","SARS-CoV-2","ACCCGCCTTACACGGG",8,166.78,9.8,-0.97,0.04,2.81,1.08,0,"1 nonsynonymous","N118R",1
"lib1","SARS-CoV-2","ACCCGCCTTCACAAGG",1,57.92,10.2,-0.56,0.08,2.57,1.06,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","ACCCGCGATAGAGAAT",3,16.26,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N58L Y121R F134P P149N P169M",5
"lib1","SARS-CoV-2","ACCCGCGGAAGATTCC",2,9.83,NA,NA,NA,NA,NA,NA,"stop","N30* F44T G83F F160N",4
"lib1","SARS-CoV-2","ACCCGCTGACCTCGAA",4,15.76,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","L5Q V11I Y66S K87L V103D L131S V180P",7
"lib1","SARS-CoV-2","ACCCGCTTAAGCCTCC",11,43.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11D A67P D98Y L111S",4
"lib1","SARS-CoV-2","ACCCGGAACTATTTGC",7,34.17,9.94,-0.83,0.09,2.7,1.06,0,">1 nonsynonymous","C31V E141S",2
"lib1","SARS-CoV-2","ACCCGGACCAGCATCC",1,45.22,10.51,-0.25,0.05,2.95,1,0,">1 nonsynonymous","S43L K56L C61V D97T",4
"lib1","SARS-CoV-2","ACCCGGAGCAGGTCAT",1,17.72,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","C6R G74P G174M",3
"lib1","SARS-CoV-2","ACCCGGCTTGCTAGCG",3,42.99,10.3,-0.46,0.07,2.79,1,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","ACCCGGGACAATACAA",2,17.83,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","A18V D98T R127G C158A",4
"lib1","SARS-CoV-2","ACCCGGGATGAACATC",5,56.06,9.43,-1.34,0.2,1.83,1.13,0.02,">1 nonsynonymous","Y35H Y39R T63N N130T Y178N",5
"lib1","SARS-CoV-2","ACCCGGTAAATTTAAG",7,6.9,10.77,0.01,0.57,1.59,1.05,0.08,">1 nonsynonymous","V37S A81T",2
"lib1","SARS-CoV-2","ACCCGGTATACCGAAG",1,12.55,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","ACCCGGTCTGCACGGT",2,31.85,9,-1.76,0.24,1.5,1,0.03,"1 nonsynonymous","R25V",1
"lib1","SARS-CoV-2","ACCCGTAAAAGAAGGG",6,90.74,9.87,-0.89,0.08,1.99,1.06,0,">1 nonsynonymous","S29V F62Q D98S P149K",4
"lib1","SARS-CoV-2","ACCCGTAAATGACCCA",7,2.33,NA,NA,NA,NA,NA,NA,"stop","W23* Y93D Q163S G172*",4
"lib1","SARS-CoV-2","ACCCGTAACAGTAAAT",3,22.07,10.15,-0.61,0.14,2.48,1.08,0.01,">1 nonsynonymous","Y35V S43M N64I Y123F E135K",5
"lib1","SARS-CoV-2","ACCCGTAACTCACCTT",5,35.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45C K87S P96W L131M F134S",5
"lib1","SARS-CoV-2","ACCCGTAAGACTATGG",3,78.41,10.36,-0.41,0.05,2.86,1.01,0,">1 nonsynonymous","Y21V D97N T201S",3
"lib1","SARS-CoV-2","ACCCGTAAGGAACATC",3,118.69,10.68,-0.09,0.05,2.93,1.04,0,"1 nonsynonymous","K114A",1
"lib1","SARS-CoV-2","ACCCGTAAGTAAATAA",9,74.17,10.19,-0.57,0.06,2.9,1.01,0,">1 nonsynonymous","L5F S29I T170S",3
"lib1","SARS-CoV-2","ACCCGTAATCACGAAC",6,32.95,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9A R136N C150V",3
"lib1","SARS-CoV-2","ACCCGTAATTAAATAA",2,116.35,10.77,0.01,0.05,2.94,1.03,0,"1 nonsynonymous","T63D",1
"lib1","SARS-CoV-2","ACCCGTACATAAGGAA",10,132.4,10.18,-0.58,0.05,2.95,1,0,">1 nonsynonymous","Y119R F134G",2
"lib1","SARS-CoV-2","ACCCGTATGCTGGGTA",3,22.76,10.53,-0.23,0.07,2.91,1,0,">1 nonsynonymous","N13T V37I",2
"lib1","SARS-CoV-2","ACCCGTATGTGACCCA",7,87.7,10.78,0.01,0.07,2.9,1.06,0,">1 nonsynonymous","Y35M L57F",2
"lib1","SARS-CoV-2","ACCCGTCATTATGACC",7,15.9,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13M G51Y V77A I104F V173C",5
"lib1","SARS-CoV-2","ACCCGTCCGCCCATCT",1,11.19,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C49S G116W I142V F156S",4
"lib1","SARS-CoV-2","ACCCGTCTAAGAGAGC",1,51.91,10.32,-0.44,0.09,2.76,1,0,">1 nonsynonymous","L5N R136S",2
"lib1","SARS-CoV-2","ACCCGTGATATATAGG",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N Y91F K132C E154F Y175V",5
"lib1","SARS-CoV-2","ACCCGTGCATACACAT",2,2.29,NA,NA,NA,NA,NA,NA,"stop","V11S L57Y S69E T100K P161*",5
"lib1","SARS-CoV-2","ACCCGTGCGAACAAGA",2,19.06,6.22,-4.54,0.65,1.5,1.1,0.02,">1 nonsynonymous","N4W S45D C61R N107L",4
"lib1","SARS-CoV-2","ACCCGTGTCGCGATTA",12,30.8,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15L P96A T148M G152S F167P",5
"lib1","SARS-CoV-2","ACCCGTTCAACCAACG",1,55.19,8.74,-2.02,0.17,2.29,1.12,0.01,">1 nonsynonymous","T63D D97V N118L",3
"lib1","SARS-CoV-2","ACCCGTTCATAGGAAA",1,35.94,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","I2K G117L R124S G146L V180F",5
"lib1","SARS-CoV-2","ACCCGTTGGGTCTTCA",3,131.4,10.27,-0.49,0.05,2.87,1.05,0,">1 nonsynonymous","V11L T85K N171S T201R",4
"lib1","SARS-CoV-2","ACCCTAAAAATTAAAA",1,32.43,6,-4.76,2,3,1.36,0.02,">1 nonsynonymous","I2R W23G K87C F99E S113V K198L",6
"lib1","SARS-CoV-2","ACCCTAAAATGATTAT",6,35.47,6.51,-4.26,0.43,1.5,1.05,0.02,">1 nonsynonymous","D112T G146F G152L",3
"lib1","SARS-CoV-2","ACCCTAAATCACACCA",11,200.37,9.23,-1.53,0.08,2.47,1.09,0,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","ACCCTAAATTCGTACA",2,90.97,9.59,-1.18,0.06,2.85,1.04,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","ACCCTAACAACCAGAG",6,13.09,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6F F62T F99S",3
"lib1","SARS-CoV-2","ACCCTAACAATACTTG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","S41M S139*",2
"lib1","SARS-CoV-2","ACCCTAACGGATACAA",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S T85V P149R",3
"lib1","SARS-CoV-2","ACCCTAAGAACACAAC",1,42.14,10.8,0.03,0.08,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCTACCCAATACCA",14,36.88,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","Y50S L162R P169N",3
"lib1","SARS-CoV-2","ACCCTACCGGACTGTA",4,59.37,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F8K N64R L95N F134L R179Q",5
"lib1","SARS-CoV-2","ACCCTACGTGCGCCAG",1,8.37,10.42,-0.35,0.09,2.97,1.01,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","ACCCTACTTGTGTATG",3,13.38,9.81,-0.96,0.15,2.19,1,0.01,">1 nonsynonymous","D59N A89G",2
"lib1","SARS-CoV-2","ACCCTAGAATAGCACT",1,3.05,NA,NA,NA,NA,NA,NA,"stop","S29A L60V W106* C150P F185Y",5
"lib1","SARS-CoV-2","ACCCTAGACCCAAGAG",5,45.14,7.19,-3.58,0.25,1.5,1.16,0.02,">1 nonsynonymous","N151T L162W",2
"lib1","SARS-CoV-2","ACCCTAGACCCCATCG",5,74.02,10.64,-0.12,0.03,2.96,1,0,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","ACCCTAGAGAAAAGGA",2,10.96,9.55,-1.22,0.26,1.59,1.13,0.03,">1 nonsynonymous","P54H W106A K114R",3
"lib1","SARS-CoV-2","ACCCTAGCGACTCTCA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","I2F A33L N118F R136* T201*",5
"lib1","SARS-CoV-2","ACCCTAGGCAACTTTG",2,24.35,9.66,-1.11,0.12,2.31,1.02,0.01,">1 nonsynonymous","F47I Y91M G152S",3
"lib1","SARS-CoV-2","ACCCTAGGCCAAGAGT",3,14.67,10.79,0.03,0.05,2.88,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCCTAGGCTAACAGT",3,55.05,10.03,-0.73,0.07,2.76,1.09,0,">1 nonsynonymous","I2D K87A D97Y S164T Y175F",5
"lib1","SARS-CoV-2","ACCCTAGTCGTTTGCT",10,99.81,6.17,-4.6,0.59,1.5,1.15,0.01,">1 nonsynonymous","Y123L G146S Y178D",3
"lib1","SARS-CoV-2","ACCCTATAACCGTGAC",3,2.14,NA,NA,NA,NA,NA,NA,"stop","N40S F99C R127*",3
"lib1","SARS-CoV-2","ACCCTATACAATAGAA",1,34.43,10.5,-0.26,0.06,2.86,1.07,0,">1 nonsynonymous","S53W T85R I138Q",3
"lib1","SARS-CoV-2","ACCCTATACCAATTAA",2,14.42,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","L5T P82T D90P",3
"lib1","SARS-CoV-2","ACCCTATCCCGAACAG",3,13.81,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L60A S69L T100D L131N",4
"lib1","SARS-CoV-2","ACCCTATGAAGGGTCG",9,100.93,10.23,-0.54,0.08,2.23,1.02,0,">1 nonsynonymous","C61N V103M N110R L122K",4
"lib1","SARS-CoV-2","ACCCTATTAAAACTGG",3,40.89,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61R T100Q D112F N120D T170C",5
"lib1","SARS-CoV-2","ACCCTATTACTTCGAC",4,46.15,7.36,-3.41,0.35,1.5,1.13,0.04,">1 nonsynonymous","F62T W106V K114P R136M",4
"lib1","SARS-CoV-2","ACCCTATTATATGGTA",5,35.32,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G86D L95T D98G",3
"lib1","SARS-CoV-2","ACCCTATTATTAAAGT",3,41.19,6,-4.76,0.69,1.5,1.1,0,">1 nonsynonymous","G51Y N120L C150I",3
"lib1","SARS-CoV-2","ACCCTATTCATTTTCC",2,25.11,9.37,-1.39,0.26,1.54,1.1,0.03,">1 nonsynonymous","V11M D90I",2
"lib1","SARS-CoV-2","ACCCTATTCCACATAC",2,21.1,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C6L I138L Q168P",3
"lib1","SARS-CoV-2","ACCCTATTCCGTTCCA",3,73.62,10.75,-0.01,0.07,2.88,1.06,0,">1 nonsynonymous","G9W Y123K N130S",3
"lib1","SARS-CoV-2","ACCCTCAGTCCGACAT",2,89.23,10.71,-0.05,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCCTCATCATGGACA",3,259.63,9.88,-0.88,0.04,2.84,1.03,0,">1 nonsynonymous","A22G G166S",2
"lib1","SARS-CoV-2","ACCCTCCTAGTGGGTC",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K D75A N151K",3
"lib1","SARS-CoV-2","ACCCTCCTCAAACCCA",5,56.03,10.69,-0.07,0.07,2.91,1.02,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","ACCCTCCTGAGATACA",5,34.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L38I D68R G155A",3
"lib1","SARS-CoV-2","ACCCTCGAATACAAAG",1,50.19,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T140P Y165A",2
"lib1","SARS-CoV-2","ACCCTCGATTAATGCT",6,11.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R A105M K114I R136T S139N",5
"lib1","SARS-CoV-2","ACCCTCGGACTATATC",7,4.35,NA,NA,NA,NA,NA,NA,"stop","C61* A81I F99A N107V G116I G172L",6
"lib1","SARS-CoV-2","ACCCTCGTTAACCTAA",3,17.41,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","F12L V37W K87D F99A I138G",5
"lib1","SARS-CoV-2","ACCCTGAAACAAACTA",4,0,NA,NA,NA,NA,NA,NA,"stop","S43* Y119N",2
"lib1","SARS-CoV-2","ACCCTGAAACTCTAAC",5,20.95,6.83,-3.94,0.5,1.5,1.12,0.07,">1 nonsynonymous","T3V K56Y G155S P161K P169T",5
"lib1","SARS-CoV-2","ACCCTGAATACTCAAT",2,25.06,10.25,-0.51,0.1,2.62,1,0.01,">1 nonsynonymous","V37Y K94S L122S",3
"lib1","SARS-CoV-2","ACCCTGACACTAGGAG",5,2.95,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","ACCCTGAGACACCGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","D97I V103*",2
"lib1","SARS-CoV-2","ACCCTGAGTCTCAACC",1,0.41,NA,NA,NA,NA,NA,NA,"stop","N1K A105V W106* N157R",4
"lib1","SARS-CoV-2","ACCCTGATAAAGATAA",2,3.61,NA,NA,NA,NA,NA,NA,"stop","Y91* D112F",2
"lib1","SARS-CoV-2","ACCCTGATTTGTTCAC",19,2.49,NA,NA,NA,NA,NA,NA,"stop","E10D V37* S69T C150G",4
"lib1","SARS-CoV-2","ACCCTGCAACCAAGTT",1,35.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4I Y35S S139I",3
"lib1","SARS-CoV-2","ACCCTGCACGAGTCAA",1,1.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q163S",1
"lib1","SARS-CoV-2","ACCCTGCCTCAACCAC",6,118.38,6,-4.76,0.88,1.5,1.14,0,">1 nonsynonymous","Y35R T46F P54A R73Y N107C T201I",6
"lib1","SARS-CoV-2","ACCCTGCGCACGATCT",1,0.41,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ACCCTGGAATCACCTG",6,16.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R C49M T63S G116E A145I S200W",6
"lib1","SARS-CoV-2","ACCCTGGACAGCGCGG",2,11.3,8.38,-2.39,0.15,2.94,1,0.01,">1 nonsynonymous","F62L Y119C G155S",3
"lib1","SARS-CoV-2","ACCCTGGACCAAGTTA",2,40.25,9.43,-1.33,0.11,2.01,1.12,0.01,">1 nonsynonymous","F8Y Y121R",2
"lib1","SARS-CoV-2","ACCCTGGCACTAGACT",3,25.07,10.76,-0.01,0.06,2.95,1.02,0,"1 nonsynonymous","S129V",1
"lib1","SARS-CoV-2","ACCCTGTAATTGTTAA",3,67.09,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2P A18Y L60E Y165T",4
"lib1","SARS-CoV-2","ACCCTGTATAAATAAC",1,41.96,9.04,-1.73,0.16,1.5,1.12,0.01,">1 nonsynonymous","F62I P96L",2
"lib1","SARS-CoV-2","ACCCTGTCGAGACGAG",1,100.47,10.61,-0.15,0.05,2.95,1.03,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","ACCCTGTGAAACATAG",1,25.4,10.21,-0.55,0.11,2.69,1,0,">1 nonsynonymous","G9R A22T V52L",3
"lib1","SARS-CoV-2","ACCCTGTGTTAAGAAT",3,104.71,10.2,-0.57,0.04,2.94,1,0,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","ACCCTTACCAAACCCA",4,1.66,NA,NA,NA,NA,NA,NA,"stop","C6V S41W V77W K128L G155* V182I",6
"lib1","SARS-CoV-2","ACCCTTACCACAAAAT",1,8.19,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","A14G T85L W106N K128S Q168Y",5
"lib1","SARS-CoV-2","ACCCTTACTATCAAAA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","F44* N110* T170N",3
"lib1","SARS-CoV-2","ACCCTTATACGTTAAG",7,1.06,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib1","SARS-CoV-2","ACCCTTATCAAAAAAA",3,22.46,6.78,-3.99,0.65,1.5,1.11,0.07,">1 nonsynonymous","N13L G51C P177C",3
"lib1","SARS-CoV-2","ACCCTTCAACACTGAT",11,2.05,NA,NA,NA,NA,NA,NA,"stop","K56* F126Y F156L",3
"lib1","SARS-CoV-2","ACCCTTCAATCCACAG",2,0.24,NA,NA,NA,NA,NA,NA,"stop","A42* P54T R127Q D137A Q144R",5
"lib1","SARS-CoV-2","ACCCTTCACCACAGGA",8,220.03,10.35,-0.41,0.04,2.86,1.05,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","ACCCTTCACGATGACA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","G86E D112*",2
"lib1","SARS-CoV-2","ACCCTTCATGGACAGT",9,189.32,8.26,-2.51,0.15,1.59,1.11,0.01,">1 nonsynonymous","N40H P177C S200N",3
"lib1","SARS-CoV-2","ACCCTTCCCTGACCAC",4,0.8,NA,NA,NA,NA,NA,NA,"stop","F134M F156*",2
"lib1","SARS-CoV-2","ACCCTTCTAAATGAAT",5,82.21,10.78,0.02,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCCTTCTACCTTTAA",2,44.83,10.64,-0.12,0.05,2.85,1.09,0,"1 nonsynonymous","Y21W",1
"lib1","SARS-CoV-2","ACCCTTCTCTGGCCAT",5,86.21,10.53,-0.24,0.03,2.91,1.04,0,">1 nonsynonymous","G9E Y35C",2
"lib1","SARS-CoV-2","ACCCTTCTGAGAGATA",1,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104V Y119P C150H N171G",4
"lib1","SARS-CoV-2","ACCCTTCTGATAGCGA",8,110.71,10.54,-0.22,0.05,2.89,1.05,0,">1 nonsynonymous","T3A S36L",2
"lib1","SARS-CoV-2","ACCCTTGACCGAGGAT",1,23.4,10.56,-0.2,0.12,2.88,1.13,0.01,"1 nonsynonymous","V115I",1
"lib1","SARS-CoV-2","ACCCTTGAGTAAGCAC",2,9.28,6,-4.76,1.36,3,1.09,0.01,">1 nonsynonymous","D90Y T100S V173T",3
"lib1","SARS-CoV-2","ACCCTTGATCTCAACC",5,3,NA,NA,NA,NA,NA,NA,"stop","R27M C49R L60T Y91* Y119I",5
"lib1","SARS-CoV-2","ACCCTTGATGACTTAA",2,12.33,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","L38Q C61L D98Q E135L P149M",5
"lib1","SARS-CoV-2","ACCCTTGCCAAAATTT",3,51.06,9.88,-0.89,0.06,2.46,1.04,0,">1 nonsynonymous","T3N C31V N171I",3
"lib1","SARS-CoV-2","ACCCTTGGCACATAAA",9,579.98,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","R124P G155S A190S T201R",4
"lib1","SARS-CoV-2","ACCCTTGGCCGTCCAC",2,20.93,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","N4Y G51V K128L",3
"lib1","SARS-CoV-2","ACCCTTTAAGTATAAC",9,149.63,10.12,-0.64,0.06,2.86,1.03,0,">1 nonsynonymous","L5S S41W T148S G174L",4
"lib1","SARS-CoV-2","ACCCTTTAGACGCCAG",7,0.33,NA,NA,NA,NA,NA,NA,"stop","N13* T100P N120S",3
"lib1","SARS-CoV-2","ACCCTTTAGACTTTAA",6,88.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K26W S36P G86T D137R",4
"lib1","SARS-CoV-2","ACCCTTTCGACGACTA",2,18.64,9.99,-0.77,0.25,1.5,1,0.03,">1 nonsynonymous","L60R Y91L I104H",3
"lib1","SARS-CoV-2","ACCCTTTGAAACATGA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","L5H G9* A89V I142S",4
"lib1","SARS-CoV-2","ACCGAAAAAACAAACA",6,119.99,8.23,-2.53,0.24,1.66,1.11,0.02,">1 nonsynonymous","F44E K128M G166L",3
"lib1","SARS-CoV-2","ACCGAAAAAGGTAATT",1,11.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N110E Y121P I138P",3
"lib1","SARS-CoV-2","ACCGAAAACAAAGAGT",3,11.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A22K C49V Y119L G146M T201S",5
"lib1","SARS-CoV-2","ACCGAAAACATGTGAA",1,3.72,NA,NA,NA,NA,NA,NA,"stop","V37P S129P F167*",3
"lib1","SARS-CoV-2","ACCGAAAATATACAAT",3,13.87,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K87N A105I G146S N151I L162V R179T",6
"lib1","SARS-CoV-2","ACCGAAACCCATGAGG",1,43.29,9.32,-1.44,0.13,2.67,1.14,0.01,">1 nonsynonymous","G117R T140S",2
"lib1","SARS-CoV-2","ACCGAAACTTACAAAT",6,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H L131W E141V",3
"lib1","SARS-CoV-2","ACCGAAACTTATCAAA",1,7.81,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C6W C31K C49V K87M E135S",5
"lib1","SARS-CoV-2","ACCGAAAGACACTAAG",1,0.49,NA,NA,NA,NA,NA,NA,"stop","V77W Y123* S164F",3
"lib1","SARS-CoV-2","ACCGAAAGCTGACTTG",2,8.05,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","A105L N171D Y175S",3
"lib1","SARS-CoV-2","ACCGAAAGTTGATATA",8,30.09,10.85,0.08,0.07,2.85,1.1,0,">1 nonsynonymous","T55M S200M",2
"lib1","SARS-CoV-2","ACCGAAATAGACACCG",7,32.11,6.98,-3.79,0.5,1.5,1.09,0.06,">1 nonsynonymous","P54S D90P",2
"lib1","SARS-CoV-2","ACCGAAATAGGCCTGC",3,42.72,10.04,-0.72,0.13,1.87,1.08,0.01,">1 nonsynonymous","A81L K132D",2
"lib1","SARS-CoV-2","ACCGAAATCACGGGAA",3,16.24,9.67,-1.09,0.23,1.98,1.03,0.02,">1 nonsynonymous","A42L K94L",2
"lib1","SARS-CoV-2","ACCGAAATCCATATGA",7,58.22,10.26,-0.51,0.08,2.81,1,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","ACCGAAATTACACAAT",6,55.99,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y119G F167K",2
"lib1","SARS-CoV-2","ACCGAAATTTTTCGCG",2,10.73,10.93,0.17,0.09,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGAACAATGAACAG",1,6.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R P169S",2
"lib1","SARS-CoV-2","ACCGAACCCATCCCTG",5,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L T55C K94A C158L S184G",5
"lib1","SARS-CoV-2","ACCGAACCGTATGAAG",9,69.62,6.06,-4.71,0.88,1.5,1.21,0.02,">1 nonsynonymous","C49Y F99M",2
"lib1","SARS-CoV-2","ACCGAACGCCGCATTT",1,2.89,NA,NA,NA,NA,NA,NA,"stop","L5S V52G N107*",3
"lib1","SARS-CoV-2","ACCGAACGGTCACGCA",6,3.01,NA,NA,NA,NA,NA,NA,"stop","F47N C61*",2
"lib1","SARS-CoV-2","ACCGAACTACGTAAAA",3,84.71,8.67,-2.1,0.13,2.09,1.11,0.01,"1 nonsynonymous","Y165A",1
"lib1","SARS-CoV-2","ACCGAACTATATGTTA",5,5.8,NA,NA,NA,NA,NA,NA,"stop","Y39S A81D N110* Y119S V153Q",5
"lib1","SARS-CoV-2","ACCGAACTGCTAGAAA",2,48.25,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","S129V G172S P177L",3
"lib1","SARS-CoV-2","ACCGAAGATCTCAGCT",1,14.97,10.39,-0.37,0.3,2.76,1.14,0.05,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","ACCGAAGCTCCCTTCA",5,53.44,10.74,-0.02,0.06,2.94,1.01,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","ACCGAAGTGATTTAAT",2,9.15,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","D75V F99C",2
"lib1","SARS-CoV-2","ACCGAATAAAACTACA",1,0.47,NA,NA,NA,NA,NA,NA,"stop","G117* Y178N",2
"lib1","SARS-CoV-2","ACCGAATAAATAAAAA",4,92.25,10.71,-0.06,0.06,2.91,1.06,0,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","ACCGAATACATGGCCA",5,7.74,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","T15L C49Y N92Y Y123G I142F",5
"lib1","SARS-CoV-2","ACCGAATACGCGGCAC",7,208.08,10.14,-0.62,0.07,2.83,1.01,0,">1 nonsynonymous","T3R Y119R",2
"lib1","SARS-CoV-2","ACCGAATGAAAATGAG",5,137.42,10.77,0,0.05,2.95,1.04,0,">1 nonsynonymous","T63L V173L",2
"lib1","SARS-CoV-2","ACCGAATGAACGCTGT",4,0.71,NA,NA,NA,NA,NA,NA,"stop","S43* G86F N118P S139D T201S",5
"lib1","SARS-CoV-2","ACCGAATGAATGCCGG",4,20.24,8.09,-2.68,0.32,1.5,1.13,0.04,">1 nonsynonymous","K94N A105C",2
"lib1","SARS-CoV-2","ACCGAATGCATAAGTT",1,0.95,NA,NA,NA,NA,NA,NA,"stop","F44* L125I E141R",3
"lib1","SARS-CoV-2","ACCGAATTAAACTGAT",2,0.04,NA,NA,NA,NA,NA,NA,"stop","I2T V71* L122W K132M G152S",5
"lib1","SARS-CoV-2","ACCGAATTGTGGGCTA",1,73.56,10.53,-0.23,0.07,2.89,1,0,">1 nonsynonymous","N24V T140S",2
"lib1","SARS-CoV-2","ACCGACAAACCTGTGA",9,74.71,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14E V37K Y93A",3
"lib1","SARS-CoV-2","ACCGACAAAGTCTTAT",8,52.91,8.79,-1.97,0.21,1.5,1,0.02,">1 nonsynonymous","D90I P133E",2
"lib1","SARS-CoV-2","ACCGACAAATTTCGAG",1,6.97,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","N13V N107I",2
"lib1","SARS-CoV-2","ACCGACAAGCGAATAG",3,33.43,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6S F70M T140P",3
"lib1","SARS-CoV-2","ACCGACAGATCCAGTG",3,35.35,6.51,-4.26,0.4,1.5,1.21,0.02,">1 nonsynonymous","T55S R179S",2
"lib1","SARS-CoV-2","ACCGACATAACACAAA",3,13.82,10.44,-0.33,0.23,2.07,1,0.02,">1 nonsynonymous","T3N Q84W S147I",3
"lib1","SARS-CoV-2","ACCGACATAACATAAT",8,59.73,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A105D E141Q",2
"lib1","SARS-CoV-2","ACCGACATACTAATCT",14,188.85,10.2,-0.56,0.04,2.92,1.01,0,">1 nonsynonymous","C6Y N30L S129N",3
"lib1","SARS-CoV-2","ACCGACATCACTCTAT",2,12.39,10.67,-0.09,0.07,2.97,1,0,">1 nonsynonymous","R27M S41W",2
"lib1","SARS-CoV-2","ACCGACATCTCATGGC",1,64.48,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","R124L G172K",2
"lib1","SARS-CoV-2","ACCGACCAAAAAACAT",6,0.99,NA,NA,NA,NA,NA,NA,"stop","Y91* S147W",2
"lib1","SARS-CoV-2","ACCGACCAAAATTCTA",2,47.99,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62S D90I V180F",3
"lib1","SARS-CoV-2","ACCGACCAATATTCTG",9,68.99,7.41,-3.36,0.47,1.5,1,0.06,">1 nonsynonymous","V37M G101H N120R G152I",4
"lib1","SARS-CoV-2","ACCGACCACACAAAAG",6,59.83,10.82,0.05,0.08,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGACCACGACTCGC",2,7.46,10.71,-0.06,0.09,2.97,1,0.01,">1 nonsynonymous","Y66F P149S",2
"lib1","SARS-CoV-2","ACCGACCATGATCATG",4,71.57,6.53,-4.24,0.25,1.5,1.11,0.01,">1 nonsynonymous","C61M D90H V173T",3
"lib1","SARS-CoV-2","ACCGACCCAAGTGACC",1,20.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K48F A67G N109R R136Y G174K",5
"lib1","SARS-CoV-2","ACCGACCCATCCCACT",11,2.38,NA,NA,NA,NA,NA,NA,"stop","Y50K F62R Y165*",3
"lib1","SARS-CoV-2","ACCGACCCCATGATCA",5,0.4,NA,NA,NA,NA,NA,NA,"stop","S41* L188H",2
"lib1","SARS-CoV-2","ACCGACGAAACCAAAT",4,166.19,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I104V L122G Y165T V173D P177V",5
"lib1","SARS-CoV-2","ACCGACGATAATTCTA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","D112* K128T N151I",3
"lib1","SARS-CoV-2","ACCGACGTATGCAGAT",9,54.54,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5M S43H V65G N107F N120L",5
"lib1","SARS-CoV-2","ACCGACGTTCAACTCA",2,9.58,8.76,-2,0.18,1.72,1.2,0.02,">1 nonsynonymous","N4G T15S A89N F160T",4
"lib1","SARS-CoV-2","ACCGACTATATCAGAC",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y P82K D90H S129P F167T",5
"lib1","SARS-CoV-2","ACCGACTCACGTCTTT",1,21.28,10.27,-0.49,0.11,2.33,1.02,0.01,">1 nonsynonymous","S53P D75S D98M",3
"lib1","SARS-CoV-2","ACCGACTCCGTCCATA",4,62.1,9.97,-0.79,0.05,2.86,1.03,0,">1 nonsynonymous","A14T Q79E",2
"lib1","SARS-CoV-2","ACCGACTCGTTACCAG",3,0.63,NA,NA,NA,NA,NA,NA,"stop","N1V A22V I28K V37T V52N I88* G146R",7
"lib1","SARS-CoV-2","ACCGACTCTCGTTACC",3,36.47,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I2D C49L I88A",3
"lib1","SARS-CoV-2","ACCGACTTCCATATAA",3,24.11,6.9,-3.86,0.31,1.5,1.04,0.02,">1 nonsynonymous","G9V Y39K D68H Y119Q",4
"lib1","SARS-CoV-2","ACCGAGAAACAGGAAT",5,64.4,8.72,-2.04,0.26,1.5,1.15,0.02,">1 nonsynonymous","A33E V77T",2
"lib1","SARS-CoV-2","ACCGAGAAGTCGCAAG",1,13.99,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","V20R T100Y K128I",3
"lib1","SARS-CoV-2","ACCGAGACAAAATAAC",1,10.61,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","N107S C158E",2
"lib1","SARS-CoV-2","ACCGAGACATAAGCGA",4,10.95,10.3,-0.46,0.15,2.78,1,0.02,">1 nonsynonymous","N58W T100L",2
"lib1","SARS-CoV-2","ACCGAGAGCATAATAA",2,5.82,9.74,-1.03,0.08,3,1.03,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","ACCGAGATAGATATTC",5,26.29,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T3E S36I F44I P82L N157Y",5
"lib1","SARS-CoV-2","ACCGAGCCCGGTCTAT",6,71.5,9.6,-1.16,0.11,2.04,1.07,0,">1 nonsynonymous","R136L E141V P149A",3
"lib1","SARS-CoV-2","ACCGAGCGCACCCCAT",2,15.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16I Y35T N107T V181Y",4
"lib1","SARS-CoV-2","ACCGAGCTGAAAAAAG",4,0.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N110Q",1
"lib1","SARS-CoV-2","ACCGAGCTGGAAAGAA",6,64.72,10.71,-0.06,0.04,2.92,1.06,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","ACCGAGCTTTAATAAG",2,23.49,9.97,-0.8,0.19,2.29,1.16,0.02,">1 nonsynonymous","F17V I72V V180S P197L",4
"lib1","SARS-CoV-2","ACCGAGGATTAATCAT",2,29.81,6,-4.76,1.53,1.5,1.08,0,">1 nonsynonymous","Y93S L122R",2
"lib1","SARS-CoV-2","ACCGAGGCACTAAGGC",3,5.64,6,-4.76,0.85,3,1,0,">1 nonsynonymous","V103R K114Q",2
"lib1","SARS-CoV-2","ACCGAGGCCGGTTCGC",1,34.2,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F44L G117W Y165M",3
"lib1","SARS-CoV-2","ACCGAGGCTTCGATAG",3,32.91,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K56F V65R L131G",3
"lib1","SARS-CoV-2","ACCGAGTATTAACATT",5,51.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R V71P",2
"lib1","SARS-CoV-2","ACCGAGTCACGACATG",1,7.53,6,-4.76,2,3,1.05,0.02,">1 nonsynonymous","V77R D98Y S113T",3
"lib1","SARS-CoV-2","ACCGAGTGGGGGCATA",7,38.65,6.53,-4.24,0.72,1.5,1.23,0.06,">1 nonsynonymous","G9S G86F D97F",3
"lib1","SARS-CoV-2","ACCGAGTTAAAATTGA",2,71.51,10,-0.77,0.13,2.36,1.07,0.01,">1 nonsynonymous","I28G T85K",2
"lib1","SARS-CoV-2","ACCGATAAATATAACA",9,54.61,6,-4.76,2,1.5,1.43,0.06,">1 nonsynonymous","V103G N151P",2
"lib1","SARS-CoV-2","ACCGATAACTAATGAA",5,70.89,10.06,-0.7,0.05,2.77,1.04,0,">1 nonsynonymous","E10S I142H",2
"lib1","SARS-CoV-2","ACCGATAACTTGGGAT",8,60.01,6,-4.76,1.59,1.5,1.1,0.02,">1 nonsynonymous","Y93P P149N",2
"lib1","SARS-CoV-2","ACCGATAATATAGAAG",2,20.57,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","V20M L38H S129R E135L Y165F",5
"lib1","SARS-CoV-2","ACCGATAATGAAATTA",12,200.36,10.81,0.05,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCGATAGACAATACA",1,18.32,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V71M P133F F160N G172T",4
"lib1","SARS-CoV-2","ACCGATATACTACCCA",4,25.51,10.83,0.07,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGATATCAGTGCAT",10,21.17,6,-4.76,2,3,1.2,0,">1 nonsynonymous","D98V V181F",2
"lib1","SARS-CoV-2","ACCGATCAGGCACGAG",1,0.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","ACCGATCCTTAATAGG",4,14.62,10.76,0,0.12,2.86,1.03,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACCGATCTAATCGGGT",6,66.99,10.84,0.07,0.06,2.97,1,0,">1 nonsynonymous","L5F P54V",2
"lib1","SARS-CoV-2","ACCGATCTACACTTGC",1,3.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","ACCGATCTTTTTATAC",3,45.64,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G86D D98M G116E",3
"lib1","SARS-CoV-2","ACCGATGAATGCGACT",1,22.68,10.19,-0.57,0.12,2.92,1.03,0.01,">1 nonsynonymous","R73K T170Q",2
"lib1","SARS-CoV-2","ACCGATGCCCATACCA",5,63.55,10.47,-0.3,0.05,2.91,1.04,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","ACCGATGCCGGCCTTC",4,15.1,10.81,0.05,0.12,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGATGGCGACGTAA",3,20.82,10.51,-0.25,0.32,2.55,1.03,0.03,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","ACCGATGTTTATATTA",6,104.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K114N G146P G155S Q176M",4
"lib1","SARS-CoV-2","ACCGATTAATCAATCC",8,290.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10Y A105Y E141I P177E P197M",5
"lib1","SARS-CoV-2","ACCGATTCGTGCCAAG",4,0.66,NA,NA,NA,NA,NA,NA,"stop","A33F Y159*",2
"lib1","SARS-CoV-2","ACCGATTCTACCCCTT",6,37.44,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","V11S L60N S129A Y165L",4
"lib1","SARS-CoV-2","ACCGATTTTTCATTAT",6,37.28,10.75,-0.02,0.11,2.72,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCAAAAAAACTGG",2,28.09,7.18,-3.59,0.22,1.5,1.06,0.01,">1 nonsynonymous","Y66S K94L",2
"lib1","SARS-CoV-2","ACCGCAACTATAATTA",5,109.34,8.3,-2.46,0.15,2.3,1.09,0.01,">1 nonsynonymous","R73E T100N",2
"lib1","SARS-CoV-2","ACCGCAAGAAATGCCA",3,24.78,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y35N Y93H Y159D",3
"lib1","SARS-CoV-2","ACCGCACAAGAGGTAA",3,8.45,10.32,-0.45,0.26,2.37,1.15,0.02,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","ACCGCACCTGCGAGTA",2,40.97,10.37,-0.4,0.07,2.92,1.01,0,">1 nonsynonymous","T55K E135K",2
"lib1","SARS-CoV-2","ACCGCACGAGCCTATA",9,731.39,10.75,-0.01,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCACGCAAAGCCT",3,22.87,6,-4.76,2,3,1.13,0.03,">1 nonsynonymous","G152S V181D",2
"lib1","SARS-CoV-2","ACCGCACGCTGAAAAT",10,171.21,10.85,0.09,0.08,2.95,1.02,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ACCGCACGTGGCGACG",2,41.13,10.03,-0.73,0.09,2.66,1,0,">1 nonsynonymous","E10I L60T",2
"lib1","SARS-CoV-2","ACCGCACTATGGTATA",2,24.84,9.04,-1.72,0.44,1.5,1,0.08,">1 nonsynonymous","T85K D90S L183K",3
"lib1","SARS-CoV-2","ACCGCAGCCCAAAGCT",3,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F V37G D97I C150I",4
"lib1","SARS-CoV-2","ACCGCAGCGTCCCAGT",9,1.14,NA,NA,NA,NA,NA,NA,"stop","F8A V103*",2
"lib1","SARS-CoV-2","ACCGCATATAAAAAGA",5,1.84,NA,NA,NA,NA,NA,NA,"stop","T15A D34K C49L P96*",4
"lib1","SARS-CoV-2","ACCGCATATACCTTGT",3,13.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31L Y93G T100N",3
"lib1","SARS-CoV-2","ACCGCATATAGATTCC",4,79.92,9.15,-1.61,0.1,2.77,1.15,0,">1 nonsynonymous","K48N Y119L T148K",3
"lib1","SARS-CoV-2","ACCGCATCCGTATGGC",3,8.18,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G86Q V182I",2
"lib1","SARS-CoV-2","ACCGCATCGGTTTACG",1,10,6.4,-4.36,0.73,1.5,1.16,0.02,">1 nonsynonymous","N30T L38T D97H R127S",4
"lib1","SARS-CoV-2","ACCGCATTACGCTACT",3,80.58,9.67,-1.1,0.11,1.81,1.14,0.01,">1 nonsynonymous","A22M W106S",2
"lib1","SARS-CoV-2","ACCGCCAATTAAAGAA",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P E135S P149G",3
"lib1","SARS-CoV-2","ACCGCCACAATAACTA",6,35.67,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","C49Y K56Q F167Y G174Y",4
"lib1","SARS-CoV-2","ACCGCCACTACATGCG",4,38.15,10.65,-0.11,0.06,2.91,1,0,">1 nonsynonymous","A18S D97V T148M",3
"lib1","SARS-CoV-2","ACCGCCACTTATTTCG",3,14.15,6.14,-4.62,0.77,1.5,1.14,0.02,">1 nonsynonymous","S36E L60V I88L D97Y S139M",5
"lib1","SARS-CoV-2","ACCGCCAGCTCATTAT",1,23.18,10.52,-0.24,0.12,2.87,1.09,0,">1 nonsynonymous","S41I D59R",2
"lib1","SARS-CoV-2","ACCGCCATATGGGAAT",5,131.29,8.74,-2.02,0.07,2.81,1.03,0,">1 nonsynonymous","D97Y G166Y",2
"lib1","SARS-CoV-2","ACCGCCATTACTCTTT",3,39.16,10.4,-0.36,0.08,2.86,1.07,0,">1 nonsynonymous","I80V N120L",2
"lib1","SARS-CoV-2","ACCGCCCAACTATATT",2,1236.45,10.53,-0.24,0.02,2.91,1.04,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","ACCGCCCCCAGGGAAG",6,51.06,6.3,-4.47,0.63,1.5,1.14,0.02,">1 nonsynonymous","P82F T140A",2
"lib1","SARS-CoV-2","ACCGCCCCTCTACATG",4,36.49,9.07,-1.7,0.11,2.62,1.16,0,">1 nonsynonymous","K48W K114G V173L",3
"lib1","SARS-CoV-2","ACCGCCCTATCGTCTT",7,61.61,10.8,0.03,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCCGATCATCCAC",4,21.35,6,-4.76,1.54,1.5,1.13,0.03,">1 nonsynonymous","S43K L95G D98V V103S",4
"lib1","SARS-CoV-2","ACCGCCTTAACCACAT",19,197.63,6,-4.76,1.93,1.5,1.21,0.01,">1 nonsynonymous","I28N P82M E141L S184V",4
"lib1","SARS-CoV-2","ACCGCCTTAATTCCCC",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P E154L F167G",3
"lib1","SARS-CoV-2","ACCGCCTTTTTCGTTA",4,18.56,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","P161F",1
"lib1","SARS-CoV-2","ACCGCGACATATCACC",2,28.68,10.66,-0.1,0.15,2.56,1.04,0.01,"1 nonsynonymous","L5Q",1
"lib1","SARS-CoV-2","ACCGCGAGCCCCAAAG",2,54.74,6,-4.76,2,3,1.11,0,">1 nonsynonymous","A33R K94A F99H G155M Q176L",5
"lib1","SARS-CoV-2","ACCGCGAGTATGCTCA",2,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F P133M C150F Q176H",4
"lib1","SARS-CoV-2","ACCGCGATACCGGCAT",6,70.95,10.48,-0.29,0.1,2.79,1.14,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","ACCGCGATACTTGATA",3,53.71,10.66,-0.11,0.06,2.85,1.06,0,">1 nonsynonymous","T140L K198R",2
"lib1","SARS-CoV-2","ACCGCGATATACACAC",2,18.44,10.53,-0.23,0.09,2.88,1.04,0,">1 nonsynonymous","K56I K198D",2
"lib1","SARS-CoV-2","ACCGCGCAAGATAATC",5,20.19,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G51Y D59V G83A A145R C150M",5
"lib1","SARS-CoV-2","ACCGCGCACATAAGCT",4,30.44,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","L57W A89L V103P Q176R",4
"lib1","SARS-CoV-2","ACCGCGCCAGTCATAA",5,40.34,10.14,-0.62,0.12,2.15,1.03,0.01,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","ACCGCGGAGTTAAAAC",3,69.64,10.73,-0.04,0.08,2.94,1.06,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","ACCGCGGTATTTCTTC",5,17.19,6.52,-4.25,0.66,1.5,1.11,0.06,">1 nonsynonymous","S41D Y91L W106V V115G T148F",5
"lib1","SARS-CoV-2","ACCGCGTACAACTCCC",3,31.45,8.7,-2.07,0.18,1.93,1.2,0.02,">1 nonsynonymous","V37K K94G L122W G174R",4
"lib1","SARS-CoV-2","ACCGCGTGCCAATGAA",4,109.78,9.98,-0.78,0.08,2.6,1.04,0,">1 nonsynonymous","D97N Y178I",2
"lib1","SARS-CoV-2","ACCGCGTTTTGACACG",8,62.83,9.9,-0.86,0.12,2.36,1.06,0,">1 nonsynonymous","S19T V32R",2
"lib1","SARS-CoV-2","ACCGCTAAAAAGGGTC",4,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A I88R W106F K114L R136Y Q176K",6
"lib1","SARS-CoV-2","ACCGCTAAACGAACTT",6,3.15,NA,NA,NA,NA,NA,NA,"stop","G83* T100L Y178S",3
"lib1","SARS-CoV-2","ACCGCTAAGACCTTAT",3,29.93,7.22,-3.54,0.25,1.5,1.2,0.02,">1 nonsynonymous","N4A V20N Y39K",3
"lib1","SARS-CoV-2","ACCGCTAAGTTTTAGT",3,26.91,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","S36L Y93E",2
"lib1","SARS-CoV-2","ACCGCTAATGCTATCA",3,123.35,10.74,-0.02,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCTAGACTCGCGC",5,187.63,10.52,-0.24,0.04,2.89,1.04,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","ACCGCTAGATATAAAT",7,120.4,10.74,-0.02,0.08,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCTAGCTCGATGC",4,76.19,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N58M N130E D137L P149K",4
"lib1","SARS-CoV-2","ACCGCTAGGAAAAAAG",1,23.12,8.72,-2.05,0.12,2.7,1.19,0.01,">1 nonsynonymous","F44L G166K",2
"lib1","SARS-CoV-2","ACCGCTAGGTCAATCT",1,26.89,6.14,-4.63,0.39,2.19,1.19,0.01,">1 nonsynonymous","A42I Y159D",2
"lib1","SARS-CoV-2","ACCGCTATTGACTCGG",5,21.15,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G9W T46R C102N Y143H",4
"lib1","SARS-CoV-2","ACCGCTCACTAAAATT",2,29.32,10.63,-0.13,0.07,2.79,1.12,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","ACCGCTCTGCACGGGA",2,37.56,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N120P P161C",2
"lib1","SARS-CoV-2","ACCGCTCTTACAAAGT",16,157,6.27,-4.49,0.79,1.5,1.3,0.03,">1 nonsynonymous","E10D R27L S69E Y119M",4
"lib1","SARS-CoV-2","ACCGCTGAAATAATGC",1,69.68,8.24,-2.53,0.15,2.38,1.12,0.01,">1 nonsynonymous","N4Y K48Q N157T",3
"lib1","SARS-CoV-2","ACCGCTGAGACTATGA",2,37.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7Q Y119E T170I",3
"lib1","SARS-CoV-2","ACCGCTTAACATGGCA",4,88.98,10.79,0.03,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGCTTAAGCTACGG",1,55.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56L G86L F134N T148I",4
"lib1","SARS-CoV-2","ACCGCTTTAATCTTAT",4,2.24,NA,NA,NA,NA,NA,NA,"stop","E10S S69* I138Y E154V Y178W",5
"lib1","SARS-CoV-2","ACCGGAAAATGCTCCA",2,58.09,10,-0.76,0.11,2.4,1.01,0.01,">1 nonsynonymous","S45V E141M K199Y",3
"lib1","SARS-CoV-2","ACCGGAAACAACGAGG",4,45.45,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A22P S43G Q176K",3
"lib1","SARS-CoV-2","ACCGGAAACGTACACC",1,28.37,9.01,-1.75,0.18,1.5,1.01,0.01,">1 nonsynonymous","L57R K114F V181I",3
"lib1","SARS-CoV-2","ACCGGAAACTTTAGAA",6,200.1,10.1,-0.67,0.05,2.9,1.02,0,">1 nonsynonymous","L60A Y119R",2
"lib1","SARS-CoV-2","ACCGGAAATAAAAGAA",5,41.21,10.75,-0.01,0.04,2.94,1.01,0,">1 nonsynonymous","R16V P54R Y91N",3
"lib1","SARS-CoV-2","ACCGGAATAAGTGTTT",3,6.27,9.63,-1.14,0.37,1.86,1.16,0.04,">1 nonsynonymous","L57W S108C",2
"lib1","SARS-CoV-2","ACCGGAATTTAACGAT",1,17.52,6.03,-4.73,1.03,2.35,1.2,0.01,">1 nonsynonymous","K87E K94Y R136Q N157K",4
"lib1","SARS-CoV-2","ACCGGACGAAAATACA",13,152.02,8.93,-1.84,0.13,1.91,1.19,0.01,">1 nonsynonymous","K87S E135L",2
"lib1","SARS-CoV-2","ACCGGACGTTGTCACC",3,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V I104A D112L T201W",4
"lib1","SARS-CoV-2","ACCGGACTAAATTAAC",1,18.34,10.65,-0.11,0.09,2.96,1,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","ACCGGACTCCCTATAT",4,67.11,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A33H N118G R127Q G196Y",4
"lib1","SARS-CoV-2","ACCGGAGTATTTTAGT",8,0.72,NA,NA,NA,NA,NA,NA,"stop","C6L T63* L183N",3
"lib1","SARS-CoV-2","ACCGGATATAAAGTTG",2,24.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L57Y P82D P96L D137P N151K",5
"lib1","SARS-CoV-2","ACCGGATATCCCACGT",3,8.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33S T55I V71G",3
"lib1","SARS-CoV-2","ACCGGATCGTTAAACG",4,44.27,9.45,-1.32,0.08,2.65,1.12,0,">1 nonsynonymous","N107A F156L",2
"lib1","SARS-CoV-2","ACCGGATTGCAATGCT",9,97.44,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G83R K87A G117I G152H P161H",5
"lib1","SARS-CoV-2","ACCGGATTTCCTATAA",10,231.38,10.66,-0.1,0.03,2.93,1.02,0,">1 nonsynonymous","P7S D59N",2
"lib1","SARS-CoV-2","ACCGGATTTGCCATTC",2,16.74,9.57,-1.19,0.16,2.02,1.06,0.01,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","ACCGGCAAAAATCTCA",7,50.5,7.83,-2.93,0.4,1.5,1,0.06,">1 nonsynonymous","R25A L57S",2
"lib1","SARS-CoV-2","ACCGGCAATATTTACT",2,35.9,7.8,-2.97,0.3,1.5,1.1,0.03,">1 nonsynonymous","R25G C61H V173F",3
"lib1","SARS-CoV-2","ACCGGCATAAAAACAC",1,0.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","ACCGGCATGAAAAATG",3,60.63,10.72,-0.04,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGGCATTTCTTCCA",11,183.63,10.81,0.04,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGGCCGCGTACAAT",8,127.73,10.73,-0.03,0.05,2.92,1.02,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","ACCGGCCTCACATACG",5,71.93,10.77,0.01,0.04,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGGCCTCATAACGC",5,77.74,10.16,-0.61,0.07,2.67,1.03,0,">1 nonsynonymous","E10Y A42G V173F",3
"lib1","SARS-CoV-2","ACCGGCGAACAATCAA",5,131.84,9.72,-1.04,0.13,1.83,1.12,0.01,">1 nonsynonymous","G9N L95F",2
"lib1","SARS-CoV-2","ACCGGCGAAGCCGTCT",2,74.35,6,-4.76,2,1.5,1.37,0.03,">1 nonsynonymous","Y50A Y178E L187Q",3
"lib1","SARS-CoV-2","ACCGGCGTTGACAAAA",6,27.16,8.36,-2.4,0.23,1.54,1.21,0.01,">1 nonsynonymous","W23M V37I",2
"lib1","SARS-CoV-2","ACCGGCTCACTCGAAA",1,0.25,NA,NA,NA,NA,NA,NA,"stop","I2K N64* W106K R136W",4
"lib1","SARS-CoV-2","ACCGGCTTGATCACGA",3,28.45,10.07,-0.7,0.11,2.89,1.01,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","ACCGGCTTTACACCAA",3,52.43,6.61,-4.16,0.4,1.5,1.16,0.02,">1 nonsynonymous","C6G S36L N151W N157A",4
"lib1","SARS-CoV-2","ACCGGGAAAGCAGTGA",6,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H Y93E A105G D112S R124W G152C",6
"lib1","SARS-CoV-2","ACCGGGATACCACCTG",20,345.59,10.54,-0.23,0.03,2.92,1.03,0,">1 nonsynonymous","D59Y S184Y",2
"lib1","SARS-CoV-2","ACCGGGATTTAGGAGC",9,96.61,7.02,-3.74,0.18,1.5,1.1,0.01,"1 nonsynonymous","R179S",1
"lib1","SARS-CoV-2","ACCGGGATTTGAAGCG",5,3.6,NA,NA,NA,NA,NA,NA,"stop","Y35V S139*",2
"lib1","SARS-CoV-2","ACCGGGCATCCCGAAA",4,32.49,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A42D R124V",2
"lib1","SARS-CoV-2","ACCGGGCGTTCTTTCA",3,88.62,10.47,-0.3,0.06,2.88,1.01,0,">1 nonsynonymous","G51R P133S",2
"lib1","SARS-CoV-2","ACCGGGCTGAACCACC",6,62.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y91F T100N C158W",3
"lib1","SARS-CoV-2","ACCGGGTACTACTTAT",3,33,10.83,0.07,0.06,2.91,1.05,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","ACCGGGTATACCCTAC",3,43.37,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I28P W106R Y123P",3
"lib1","SARS-CoV-2","ACCGGGTCATATGCTA",1,8.29,10.49,-0.28,0.11,2.8,1.19,0.01,">1 nonsynonymous","N40S K132C",2
"lib1","SARS-CoV-2","ACCGGGTGCAGCTGCA",4,53.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I104L K114E P161F",3
"lib1","SARS-CoV-2","ACCGGTAATAACTCAT",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T W106L",2
"lib1","SARS-CoV-2","ACCGGTAATATCAAAA",6,29.88,7.04,-3.73,0.41,1.5,1.08,0.03,">1 nonsynonymous","L5K R73L G101S",3
"lib1","SARS-CoV-2","ACCGGTAGAAGATAAG",5,122.68,10.68,-0.09,0.04,2.94,1.04,0,">1 nonsynonymous","V32S D97K A190H",3
"lib1","SARS-CoV-2","ACCGGTATTTAAGATA",1,33.64,6,-4.76,1.7,1.5,1.23,0.02,">1 nonsynonymous","P82V F99I",2
"lib1","SARS-CoV-2","ACCGGTCTAAACTAAT",4,0.17,NA,NA,NA,NA,NA,NA,"stop","N30* C61D",2
"lib1","SARS-CoV-2","ACCGGTCTAGCCTTTG",8,1.57,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","ACCGGTGATCAATCCT",7,96.51,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T55M C158V V173S",3
"lib1","SARS-CoV-2","ACCGGTGATGAACAAG",1,57.88,10.12,-0.64,0.07,2.88,1,0,">1 nonsynonymous","D59Y R78L T85N S129N",4
"lib1","SARS-CoV-2","ACCGGTGCAATAATGT",3,65.51,10.37,-0.39,0.04,2.94,1.02,0,">1 nonsynonymous","A22T T63D",2
"lib1","SARS-CoV-2","ACCGGTGCGAGAGGAG",12,133.72,10.19,-0.58,0.06,2.79,1.02,0,">1 nonsynonymous","T100F S139I",2
"lib1","SARS-CoV-2","ACCGGTTACACAGCAT",4,143.15,9.68,-1.08,0.08,2.75,1.06,0,">1 nonsynonymous","L5G N118V",2
"lib1","SARS-CoV-2","ACCGGTTCAAGCTCTA",2,6.87,8.72,-2.04,0.26,1.86,1.09,0.03,">1 nonsynonymous","L60K D112L",2
"lib1","SARS-CoV-2","ACCGGTTCCACGGAAC",2,11.81,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I104R N151L",2
"lib1","SARS-CoV-2","ACCGGTTTCGCGGACC",1,19.79,10.08,-0.69,0.16,2.63,1,0.01,">1 nonsynonymous","G51Q D98G A190H",3
"lib1","SARS-CoV-2","ACCGTAAAACCGTTCA",1,12.38,10.25,-0.51,0.12,2.82,1.06,0.02,">1 nonsynonymous","C61T Q84E K87M K128G",4
"lib1","SARS-CoV-2","ACCGTAAACGCCACAT",5,51.62,6.63,-4.14,0.65,1.5,1.17,0.06,">1 nonsynonymous","A105L N130S G155W P169L",4
"lib1","SARS-CoV-2","ACCGTAAAGACGCACA",3,20.52,6.99,-3.77,0.09,2.18,1.13,0,">1 nonsynonymous","Y35V F62L Y143G",3
"lib1","SARS-CoV-2","ACCGTAAAGCTAAACT",1,8.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3S S36R F47R L125Q Q176R",5
"lib1","SARS-CoV-2","ACCGTAAATCTCAACG",4,18.78,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","N1T P7E E10D G51Y T85G G101N K114R F134T",8
"lib1","SARS-CoV-2","ACCGTAAATGCTCTTT",5,127.3,10.35,-0.42,0.04,2.87,1.04,0,">1 nonsynonymous","C61R D90L K199T",3
"lib1","SARS-CoV-2","ACCGTAACAACTAGAA",5,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136G N151V P169Y G174V",4
"lib1","SARS-CoV-2","ACCGTAACGGATGAAT",11,53.15,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38R L95C I104R E141C",4
"lib1","SARS-CoV-2","ACCGTAACTAAGATTA",1,44.87,10.67,-0.09,0.06,2.88,1.11,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","ACCGTAACTTGACCGC",2,33.82,10.68,-0.09,0.04,2.96,1,0,">1 nonsynonymous","T63I S200L",2
"lib1","SARS-CoV-2","ACCGTAAGATAGCTAT",4,82.1,10.15,-0.62,0.09,2.5,1.04,0,">1 nonsynonymous","Q79T V153N",2
"lib1","SARS-CoV-2","ACCGTAATCATCATCT",10,0.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","ACCGTACAAAACACGA",6,52.18,9.08,-1.68,0.14,1.65,1.18,0.01,"1 nonsynonymous","W23R",1
"lib1","SARS-CoV-2","ACCGTACAGACATAAA",14,104.24,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V77H Q144V N151K T201N",4
"lib1","SARS-CoV-2","ACCGTACAGTAAACTG",2,70.48,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D90I A145V C150H",3
"lib1","SARS-CoV-2","ACCGTACCGCCCTATC",4,133.99,10.72,-0.04,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGTACGAAATAATT",6,56.48,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G51T P161V",2
"lib1","SARS-CoV-2","ACCGTACGGGAAATAT",2,41.12,9.87,-0.9,0.1,2.23,1.02,0.01,">1 nonsynonymous","V37K Y50H K56V Q163S T201K",5
"lib1","SARS-CoV-2","ACCGTACGTCCATGAT",5,83.99,9,-1.77,0.07,2.75,1.13,0,">1 nonsynonymous","G74A K87A",2
"lib1","SARS-CoV-2","ACCGTACGTTATATAT",2,7.94,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V65G Q84L L162T T170C",4
"lib1","SARS-CoV-2","ACCGTAGAAAATGGTA",1,49.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N118F Y175M T201Y",3
"lib1","SARS-CoV-2","ACCGTAGAATTTCCTG",2,42.24,8.1,-2.67,0.24,1.56,1.17,0.02,">1 nonsynonymous","F62D S113V",2
"lib1","SARS-CoV-2","ACCGTAGACACAAGGA",5,45.01,6.02,-4.74,1.05,1.66,1.18,0.02,">1 nonsynonymous","L5P S29T G101P",3
"lib1","SARS-CoV-2","ACCGTAGCATTTTCTA",4,33.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28M S53L D90I F99S G155S",5
"lib1","SARS-CoV-2","ACCGTAGTACCTCTGA",4,56.1,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","N92R",1
"lib1","SARS-CoV-2","ACCGTAGTTTAGACCC",1,15.89,8.95,-1.81,0.18,1.63,1.12,0.02,">1 nonsynonymous","S41A F44I V52P N120M",4
"lib1","SARS-CoV-2","ACCGTATAACCCTGAA",7,176.31,9.87,-0.89,0.1,2.06,1.09,0,">1 nonsynonymous","V11C S53K",2
"lib1","SARS-CoV-2","ACCGTATCGCAGAAAT",2,9.83,7.52,-3.25,0.53,1.54,1.16,0.06,">1 nonsynonymous","D97Y N118F N130G",3
"lib1","SARS-CoV-2","ACCGTATGGAAAGCCG",3,80.13,10.42,-0.35,0.06,2.88,1.04,0,">1 nonsynonymous","L122S Q168N",2
"lib1","SARS-CoV-2","ACCGTATGGCCGTGAT",1,32.3,10.31,-0.45,0.08,2.75,1.12,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","ACCGTCAACTTGACCA",1,5.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A K128R F134Q",3
"lib1","SARS-CoV-2","ACCGTCAACTTGCTAC",1,14.97,10.18,-0.59,0.14,2.6,1.1,0.01,">1 nonsynonymous","S41K I104C",2
"lib1","SARS-CoV-2","ACCGTCAAGGAAGTCG",3,30.47,10.09,-0.68,0.13,2.47,1.03,0.01,">1 nonsynonymous","P96K F134A",2
"lib1","SARS-CoV-2","ACCGTCACATGAGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3M P96* V103T",3
"lib1","SARS-CoV-2","ACCGTCATTACCTAGC",1,26.31,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38S A89I V103G S147L",4
"lib1","SARS-CoV-2","ACCGTCCAATTTTTCT",1,34.03,8.33,-2.44,0.3,1.86,1.28,0.03,">1 nonsynonymous","E10P N107D",2
"lib1","SARS-CoV-2","ACCGTCCCCAAATACC",1,11.7,6.92,-3.84,0.56,1.5,1.02,0.06,">1 nonsynonymous","A14S I72G K114N E154S G166F",5
"lib1","SARS-CoV-2","ACCGTCCCCGCCATTT",2,30.95,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4V F62L A89H N107W I142A G166H",6
"lib1","SARS-CoV-2","ACCGTCCGAATTACGT",5,3.56,NA,NA,NA,NA,NA,NA,"stop","S45R K87S G146* S164C",4
"lib1","SARS-CoV-2","ACCGTCCGCGCCCTAT",6,66.46,6.95,-3.81,0.31,1.5,1.13,0.02,">1 nonsynonymous","Y35D G51T T85N",3
"lib1","SARS-CoV-2","ACCGTCCTATCCCAAA",3,31.33,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P82Q D98V Y143S P149Y N157A",5
"lib1","SARS-CoV-2","ACCGTCGCTAGTCGCC",6,56.32,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P96W G152A",2
"lib1","SARS-CoV-2","ACCGTCTAACACAATG",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y A33V V65E K94P A105K",5
"lib1","SARS-CoV-2","ACCGTCTACTCCAGAC",4,29.63,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","I80P",1
"lib1","SARS-CoV-2","ACCGTCTCCCGATATT",5,1.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","ACCGTCTCTCTACGGC",5,126.52,6,-4.76,0.94,1.5,1.15,0,">1 nonsynonymous","N58R G101L W106K Y119Q N157T",5
"lib1","SARS-CoV-2","ACCGTCTGAAACCTGT",5,46.6,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N13F N24S N171I Q176E",4
"lib1","SARS-CoV-2","ACCGTGAAAGATCTTT",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109M F134N T140I",3
"lib1","SARS-CoV-2","ACCGTGAACCACGAAT",7,2.25,NA,NA,NA,NA,NA,NA,"stop","I2* F62R D97V L131M",4
"lib1","SARS-CoV-2","ACCGTGAACCTTAGTG",2,12.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V F99C",2
"lib1","SARS-CoV-2","ACCGTGAATTGACTGT",4,25.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9D D34A L122S Y143N Y165K P197F",6
"lib1","SARS-CoV-2","ACCGTGACCACGCAAA",3,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62E I142D V173S",3
"lib1","SARS-CoV-2","ACCGTGACCCTGGACG",4,34.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A N64T S69E P96M S129T",5
"lib1","SARS-CoV-2","ACCGTGACTTATATAA",2,47.19,10.55,-0.22,0.06,2.88,1,0,">1 nonsynonymous","E10Q Y35W S43P S53G D90S",5
"lib1","SARS-CoV-2","ACCGTGATCCTAGTTG",2,45.37,10.27,-0.49,0.06,2.99,1.01,0,"1 nonsynonymous","I80L",1
"lib1","SARS-CoV-2","ACCGTGATGCTCCCAA",1,30.94,10.28,-0.48,0.1,2.69,1.06,0.01,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","ACCGTGCATAGACCTT",9,56.43,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F44S C49R T85N W106V Y119F I138F",6
"lib1","SARS-CoV-2","ACCGTGCCCATCCACG",3,35.89,10.63,-0.13,0.05,2.94,1.02,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","ACCGTGGAAAAATATA",3,111.46,10.74,-0.02,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGTTAAAAACTCAG",2,2.3,NA,NA,NA,NA,NA,NA,"stop","N1* T15F F62A V71M K87Y",5
"lib1","SARS-CoV-2","ACCGTTAAAAATGCCG",2,22.24,6.15,-4.62,0.5,2.81,1.2,0.01,">1 nonsynonymous","L95E N120D C150I F167P Y178P",5
"lib1","SARS-CoV-2","ACCGTTAAAATAGAAA",3,106.71,7.97,-2.79,0.23,1.5,1.07,0.02,">1 nonsynonymous","C6S I28Y F44C",3
"lib1","SARS-CoV-2","ACCGTTAAAATCTGTA",4,19.61,7.25,-3.52,0.27,1.5,1.11,0.02,">1 nonsynonymous","Y66G N109D",2
"lib1","SARS-CoV-2","ACCGTTAAATTACACG",4,24.89,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50V K56N F99T K128L",4
"lib1","SARS-CoV-2","ACCGTTACATATGTGG",4,42.04,10.05,-0.71,0.1,2.21,1.07,0.01,">1 nonsynonymous","G51L C61T",2
"lib1","SARS-CoV-2","ACCGTTACCAACAGGA",2,12.06,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","F8T D98A L122K G172R K198Y",5
"lib1","SARS-CoV-2","ACCGTTACTATTCCTA",8,72.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T85Y G152L F167V",3
"lib1","SARS-CoV-2","ACCGTTATTAACGCTA",5,35.67,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","I88E",1
"lib1","SARS-CoV-2","ACCGTTCAAGTATATC",8,125.77,10.43,-0.33,0.05,2.87,1.01,0,">1 nonsynonymous","T3K S45Y T201W",3
"lib1","SARS-CoV-2","ACCGTTCACGTAAATT",5,30.92,8.19,-2.57,0.29,1.5,1,0.03,">1 nonsynonymous","S45E C61P D90F L122A G146Y",5
"lib1","SARS-CoV-2","ACCGTTCCTGGTCCGA",6,46.36,10.8,0.04,0.06,2.93,1.04,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","ACCGTTCTATGACAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28* G86R L95M A105G",4
"lib1","SARS-CoV-2","ACCGTTCTATGGTCCT",3,26.77,8.81,-1.95,0.18,1.69,1.05,0.02,">1 nonsynonymous","K114L D137V",2
"lib1","SARS-CoV-2","ACCGTTCTCCCTTGTA",1,59.28,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","R27G C61T V103C K128S K198E",5
"lib1","SARS-CoV-2","ACCGTTCTTAAGCATT",5,13.48,7.15,-3.61,0.55,1.5,1.08,0.06,">1 nonsynonymous","F44L N92R W106L E135R Y178R",5
"lib1","SARS-CoV-2","ACCGTTGAAATCTGCT",3,20.4,6,-4.76,1.22,1.5,1.1,0.01,">1 nonsynonymous","Y35N G83S S139W G146E S200A",5
"lib1","SARS-CoV-2","ACCGTTGACGTACTAC",3,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S G51F Y91G",3
"lib1","SARS-CoV-2","ACCGTTTAAGATTCGA",2,29.81,10.78,0.02,0.07,2.92,1.05,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","ACCGTTTAAGTTATAC",3,30.24,9.26,-1.51,0.31,1.5,1.08,0.04,">1 nonsynonymous","D34V S139F",2
"lib1","SARS-CoV-2","ACCGTTTACCGATAAC",6,92.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9P T15G Y39E Y121W N151L L162N",6
"lib1","SARS-CoV-2","ACCGTTTACTCTACAG",6,103.6,10.37,-0.4,0.04,2.89,1.01,0,">1 nonsynonymous","K48Y T201S",2
"lib1","SARS-CoV-2","ACCGTTTATGAGATGT",1,11.25,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","C49A D112N",2
"lib1","SARS-CoV-2","ACCGTTTATTGCTTAA",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T R127T",2
"lib1","SARS-CoV-2","ACCGTTTCAAACTATT",5,160.75,9.99,-0.77,0.07,2.47,1.05,0,">1 nonsynonymous","R25S F160S",2
"lib1","SARS-CoV-2","ACCGTTTCAAGTATAG",4,33.3,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37L I80V N118D P133C P149T",5
"lib1","SARS-CoV-2","ACCGTTTCCGTGATAA",7,60.07,9.25,-1.52,0.16,1.51,1.13,0.01,">1 nonsynonymous","F47S K56I C195W",3
"lib1","SARS-CoV-2","ACCGTTTCGCCACCAA",3,37.24,7.1,-3.67,0.34,1.5,1.09,0.02,">1 nonsynonymous","W23T C195F G196V",3
"lib1","SARS-CoV-2","ACCGTTTGCCGCTCGG",8,181.99,10.77,0,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCGTTTGTTGTTTAT",9,61.67,9.46,-1.3,0.16,1.63,1.07,0.01,">1 nonsynonymous","P82H D98N",2
"lib1","SARS-CoV-2","ACCGTTTTATCGTGAG",2,46.14,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","W106I Y119S I138R Q168D",4
"lib1","SARS-CoV-2","ACCTAAAAAAACGACT",5,30.9,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37W F99T V182I",3
"lib1","SARS-CoV-2","ACCTAAAACAACCGCA",6,33.18,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C61R D97P R136P F160G",4
"lib1","SARS-CoV-2","ACCTAAAACCGATACT",3,33,7.17,-3.59,0.31,1.5,1.2,0.02,">1 nonsynonymous","C6S R25T D97A",3
"lib1","SARS-CoV-2","ACCTAAAACTCACAAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","D34* G51K A67C C150L",4
"lib1","SARS-CoV-2","ACCTAAAAGACAGGAG",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64E K87R A105L Y119K E135R",5
"lib1","SARS-CoV-2","ACCTAAAAGACTTCGC",11,117.83,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88L G172F",2
"lib1","SARS-CoV-2","ACCTAAAATACAAAAT",8,89.1,10.07,-0.7,0.04,2.44,1.06,0,">1 nonsynonymous","K26L F62D",2
"lib1","SARS-CoV-2","ACCTAAAATCATGAAG",4,4.51,NA,NA,NA,NA,NA,NA,"stop","D59* D112* K198*",3
"lib1","SARS-CoV-2","ACCTAAAATGGCGACG",11,126.35,10.13,-0.64,0.05,2.8,1.06,0,"1 nonsynonymous","C31R",1
"lib1","SARS-CoV-2","ACCTAAAATTATTCGT",6,26.33,8.53,-2.23,0.33,1.5,1.01,0.04,">1 nonsynonymous","G9T Y91V D98L",3
"lib1","SARS-CoV-2","ACCTAAACAGGATATT",2,47.33,10.74,-0.02,0.09,2.78,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTAAACAGTTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R R16* N64I A190E T201D",5
"lib1","SARS-CoV-2","ACCTAAAGCACGCAAT",2,34.62,10.06,-0.7,0.42,1.5,1,0.07,">1 nonsynonymous","A81P F99R F160V",3
"lib1","SARS-CoV-2","ACCTAAAGTATTAACA",2,36.42,10.33,-0.43,0.06,2.75,1.09,0,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","ACCTAAATAACGATAT",9,65.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N118E C158L",2
"lib1","SARS-CoV-2","ACCTAAATACTCACGC",4,30.24,10.66,-0.1,0.07,2.95,1.04,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","ACCTAAATAGCAGAAA",1,20.05,6.29,-4.47,0.29,1.81,1.09,0,">1 nonsynonymous","Y66E P96I C158V",3
"lib1","SARS-CoV-2","ACCTAAATAGCCAAAA",1,16.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F99D Y119I R127N G174R P197A",5
"lib1","SARS-CoV-2","ACCTAAATAGGAGAAG",4,64.87,10.81,0.04,0.07,2.9,1.07,0,">1 nonsynonymous","I2H S53T",2
"lib1","SARS-CoV-2","ACCTAAATCAATATTG",2,67.27,10.56,-0.21,0.03,2.94,1.03,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","ACCTAAATTTTGATAA",1,52.24,7.79,-2.97,0.41,1.5,1,0.05,">1 nonsynonymous","L5N V32T T85A Y119M Q176L",5
"lib1","SARS-CoV-2","ACCTAACAATAAACTT",1,17.04,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","V20Q P54Q N107L",3
"lib1","SARS-CoV-2","ACCTAACAATCCAATT",1,9.5,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","L38M N64L L95C N118T",4
"lib1","SARS-CoV-2","ACCTAACCAAGAGAAA",6,159.95,9.71,-1.06,0.12,2.09,1.11,0.01,">1 nonsynonymous","D59M N120L P149C V173A",4
"lib1","SARS-CoV-2","ACCTAACGGCAATGTA",1,24.59,9.26,-1.5,0.1,2.06,1.03,0,">1 nonsynonymous","T3S A33G Y39T Q144C T201L",5
"lib1","SARS-CoV-2","ACCTAACGTGGGCGCG",2,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97K R179L",2
"lib1","SARS-CoV-2","ACCTAACTAAATGTCC",4,14.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28S P82Y L188T",3
"lib1","SARS-CoV-2","ACCTAACTATCCACCC",4,32.09,10.6,-0.16,0.06,2.84,1.14,0,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","ACCTAACTCTGTGTTT",3,32.76,8.66,-2.1,0.13,1.5,1.04,0.01,">1 nonsynonymous","I2S A14W G146S G155N",4
"lib1","SARS-CoV-2","ACCTAACTGACCCTTG",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G D97A R124K",3
"lib1","SARS-CoV-2","ACCTAACTTATTATTA",4,9.21,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34P Y50S F99Y N107S K114L T148D",6
"lib1","SARS-CoV-2","ACCTAACTTGAGTTGG",3,2.19,NA,NA,NA,NA,NA,NA,"stop","A33M Q84*",2
"lib1","SARS-CoV-2","ACCTAAGACGGGAACC",4,57.92,6.11,-4.65,0.86,1.5,1.17,0.02,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","ACCTAAGACGGGCGGT",1,8.94,NA,NA,NA,NA,NA,0.09,"wildtype","",0
"lib1","SARS-CoV-2","ACCTAAGAGACAACAG",1,0.96,NA,NA,NA,NA,NA,NA,"stop","V71D Y143* Q176P F185N",4
"lib1","SARS-CoV-2","ACCTAAGCAAAACGAA",5,28.71,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C49L F99S K199D",3
"lib1","SARS-CoV-2","ACCTAAGGAGAATGTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","V37M S129I E141Y F160* Q168H Q176L",6
"lib1","SARS-CoV-2","ACCTAATAAAGTTGAA",1,14.29,6,-4.76,2,3,1.1,0,">1 nonsynonymous","N4R S19W P54L I80M F156A T201R",6
"lib1","SARS-CoV-2","ACCTAATAAGTAGCCA",2,27.51,9.75,-1.01,0.11,1.82,1.07,0,">1 nonsynonymous","V77A P149L",2
"lib1","SARS-CoV-2","ACCTAATAATAAAAAA",6,87.73,10.62,-0.15,0.05,2.9,1.05,0,"1 nonsynonymous","G196V",1
"lib1","SARS-CoV-2","ACCTAATACGGTTGAA",4,33.55,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V103C I142T T201M",3
"lib1","SARS-CoV-2","ACCTAATAGTAAAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2A C61T D90I G116*",4
"lib1","SARS-CoV-2","ACCTAATATGGTAGGA",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C N120K",2
"lib1","SARS-CoV-2","ACCTAATCAGACAATA",1,8.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22L L57F R124A",3
"lib1","SARS-CoV-2","ACCTAATGACTCGAAA",1,30.98,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","D59L N110R N157V",3
"lib1","SARS-CoV-2","ACCTAATGGCGTATAC",5,16.13,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9F V20E C49R V103P",4
"lib1","SARS-CoV-2","ACCTAATTAGAAGCAT",4,19.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V77E W106T T201L",3
"lib1","SARS-CoV-2","ACCTAATTATACTAAC",1,19.6,6,-4.76,0.43,2.85,1.13,0,">1 nonsynonymous","E10A C61K S69K S108Y F134V",5
"lib1","SARS-CoV-2","ACCTACAACACATCCA",10,129.21,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14R V37M Y91C F126V Y165S",5
"lib1","SARS-CoV-2","ACCTACAACAGTTGCT",12,49.81,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A42L W106G R127P T148D F167D",5
"lib1","SARS-CoV-2","ACCTACAATCTGAGAC",7,180.52,10.77,0,0.07,2.88,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCTACACGACTCCAA",6,0.42,NA,NA,NA,NA,NA,NA,"stop","C61L G116W K198*",3
"lib1","SARS-CoV-2","ACCTACAGAAGACCAT",3,70.85,9.4,-1.36,0.15,1.62,1.12,0.01,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","ACCTACAGTCAACCAG",5,67.41,10.08,-0.69,0.08,2.12,1.06,0,"1 nonsynonymous","L38Q",1
"lib1","SARS-CoV-2","ACCTACAGTTGAATCA",1,6.45,6,-4.76,2,3,1.03,0,">1 nonsynonymous","I88F T100L R136Y",3
"lib1","SARS-CoV-2","ACCTACATACCGTGAA",4,82.66,10.65,-0.12,0.05,2.95,1.02,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","ACCTACATATAACCAA",2,49.77,10.51,-0.26,0.1,2.86,1.01,0.01,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","ACCTACATCGAAACCA",7,66.2,6.2,-4.56,0.58,1.5,1.12,0.01,">1 nonsynonymous","V65T S113Q Y119S P149H L162D",5
"lib1","SARS-CoV-2","ACCTACCAATACAACT",2,43.6,8.67,-2.09,0.14,2.86,1.09,0.01,"1 nonsynonymous","F126G",1
"lib1","SARS-CoV-2","ACCTACCAGAACTAAA",6,126.21,8.58,-2.18,0.12,2.12,1.16,0.01,">1 nonsynonymous","T100A G116K E154F",3
"lib1","SARS-CoV-2","ACCTACCCACAAACAC",1,15.76,10.49,-0.27,0.07,2.92,1.03,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","ACCTACCCGCTGATAG",2,53.57,10.71,-0.06,0.05,2.94,1.02,0,">1 nonsynonymous","T63Y N151K V173R",3
"lib1","SARS-CoV-2","ACCTACCTATTCGTGC",1,20.03,10.13,-0.63,0.07,2.61,1.01,0,"1 nonsynonymous","R127G",1
"lib1","SARS-CoV-2","ACCTACCTGTGAAGAT",10,65.85,10.93,0.16,0.09,2.93,1.03,0,"1 nonsynonymous","Q168Y",1
"lib1","SARS-CoV-2","ACCTACCTTGCGAAAT",12,3.12,NA,NA,NA,NA,NA,NA,"stop","Y50* C61I",2
"lib1","SARS-CoV-2","ACCTACGAAACCACGT",3,60.46,10.65,-0.12,0.07,2.88,1.07,0,">1 nonsynonymous","P7A V37S L187Q",3
"lib1","SARS-CoV-2","ACCTACGAAAGCACTA",3,22.21,7.74,-3.02,0.27,1.8,1.18,0.02,">1 nonsynonymous","K56P D97G G174C",3
"lib1","SARS-CoV-2","ACCTACGAGAAAAAAA",3,9.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R124H E141M V173G",3
"lib1","SARS-CoV-2","ACCTACGATAAGTATA",4,27.24,9.62,-1.14,0.16,1.94,1.08,0.01,">1 nonsynonymous","A42S R136G",2
"lib1","SARS-CoV-2","ACCTACTACAATGATT",7,111.7,10.55,-0.21,0.04,2.9,1.05,0,">1 nonsynonymous","S36M A42T S129R",3
"lib1","SARS-CoV-2","ACCTACTTCAACACAA",1,10.2,10.9,0.14,0.1,2.98,1,0,"1 nonsynonymous","S129Y",1
"lib1","SARS-CoV-2","ACCTAGAAAAAGTCAT",7,46.87,6,-4.76,1.01,1.5,1.13,0.01,">1 nonsynonymous","Y66G G116F Y165P",3
"lib1","SARS-CoV-2","ACCTAGAACAGCATTT",3,12.83,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F8M A14H K87Y D98W T140V F167S",6
"lib1","SARS-CoV-2","ACCTAGAACGTAAATT",1,2.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","ACCTAGACACAATACA",3,15.18,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V20W V71D I104M N107R D137G",5
"lib1","SARS-CoV-2","ACCTAGACATAACTCT",1,16.73,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F12D F126E",2
"lib1","SARS-CoV-2","ACCTAGACGTGCCATA",17,2.08,NA,NA,NA,NA,NA,NA,"stop","N1A Y50* G86C L95C",4
"lib1","SARS-CoV-2","ACCTAGATAATATCTA",6,56.05,9.01,-1.76,0.18,1.93,1.13,0.01,"1 nonsynonymous","Y91D",1
"lib1","SARS-CoV-2","ACCTAGATAATTGTAG",5,7.91,NA,NA,NA,NA,NA,NA,"stop","G51R N109*",2
"lib1","SARS-CoV-2","ACCTAGATGATTAAAT",1,5.1,6,-4.76,2,3,1.03,0,">1 nonsynonymous","A14T C61T Y93F T100S R127S V153S",6
"lib1","SARS-CoV-2","ACCTAGATGCAAAGAT",3,29.67,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","K48G T55I D98A L122P F167L",5
"lib1","SARS-CoV-2","ACCTAGCAACCATCTT",1,26.83,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10S C150A",2
"lib1","SARS-CoV-2","ACCTAGCAAGCTAACG",5,0.41,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib1","SARS-CoV-2","ACCTAGCAAGGCCGTG",1,170.71,9.38,-1.39,0.08,2.81,1.07,0,"1 nonsynonymous","Q176A",1
"lib1","SARS-CoV-2","ACCTAGCACATAAGGA",3,1.57,NA,NA,NA,NA,NA,NA,"stop","D90Y C158*",2
"lib1","SARS-CoV-2","ACCTAGCCCTATCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36M G101*",2
"lib1","SARS-CoV-2","ACCTAGCCTAGCACTG",1,12.38,9.28,-1.49,0.11,1.95,1.06,0,">1 nonsynonymous","S53R D59G S129L N171C",4
"lib1","SARS-CoV-2","ACCTAGCGCACCCCTA",2,36.79,10.76,0,0.07,2.81,1.1,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","ACCTAGGGCCCCGCAA",5,138.95,9.03,-1.73,0.19,1.5,1.15,0.01,">1 nonsynonymous","T63P Y123N P149Q",3
"lib1","SARS-CoV-2","ACCTAGGGGAGAATTT",9,2.33,NA,NA,NA,NA,NA,NA,"stop","N4V A14T D59S D90T E141K P149* F167I",7
"lib1","SARS-CoV-2","ACCTAGTAGATAGACC",2,0,NA,NA,NA,NA,NA,NA,"stop","A42V V65T D75G W106* G117R R136F G155L K199A",8
"lib1","SARS-CoV-2","ACCTAGTGCCCCAGGC",4,17.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C K56T D90E Y91D L131S R136E",6
"lib1","SARS-CoV-2","ACCTAGTGCGGCGACA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y D90A S200K",3
"lib1","SARS-CoV-2","ACCTAGTTCATTGATT",14,45.61,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A33Y D68R D98N Y119W Q144S S200I",6
"lib1","SARS-CoV-2","ACCTATAATCCATGTT",2,8.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14N S41I I80S L122A H189S",5
"lib1","SARS-CoV-2","ACCTATACAGAGTGTG",11,87.07,10.4,-0.36,0.03,2.88,1,0,">1 nonsynonymous","N58K I80V F160M",3
"lib1","SARS-CoV-2","ACCTATACTAAAAGCT",5,45.17,10.82,0.05,0.09,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTATACTACACCAA",2,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","ACCTATATATACTAAA",2,19.23,10.78,0.01,0.05,2.98,1.02,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","ACCTATATCCGCTATT",6,111.53,10.7,-0.07,0.04,2.91,1.02,0,">1 nonsynonymous","A14Q T148L",2
"lib1","SARS-CoV-2","ACCTATATGCTACTGA",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y T63H Y93I I104G T148L",5
"lib1","SARS-CoV-2","ACCTATATGGGGTTGA",6,0,NA,NA,NA,NA,NA,NA,"stop","Y35* T85V P96H Y143R",4
"lib1","SARS-CoV-2","ACCTATATTCGGGATT",12,33.5,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N13F V37A D90E D112S",4
"lib1","SARS-CoV-2","ACCTATCAAATAAAAA",3,5.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S P82F D90I Y119L",4
"lib1","SARS-CoV-2","ACCTATCCACCGGAAT",2,61.45,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P7T T15L S36Q K94D V103C N157G",6
"lib1","SARS-CoV-2","ACCTATCCACTAGCTA",4,39.22,10.71,-0.05,0.09,2.87,1.08,0,">1 nonsynonymous","I104M T148S",2
"lib1","SARS-CoV-2","ACCTATCCTTCCTCAT",7,131.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12Q R124S",2
"lib1","SARS-CoV-2","ACCTATCGGGGAGCTT",2,10.41,6,-4.76,2,3,1.04,0,">1 nonsynonymous","N92K L131I",2
"lib1","SARS-CoV-2","ACCTATCTATGTTCAA",3,24.26,10.71,-0.05,0.09,2.93,1.04,0,">1 nonsynonymous","T85H K128I",2
"lib1","SARS-CoV-2","ACCTATCTCAATAATG",2,16.04,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y35L I104D Y123T",3
"lib1","SARS-CoV-2","ACCTATGAAAAGTGAA",2,24.57,10.95,0.19,0.1,2.94,1,0,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","ACCTATGAAATTAACC",4,188.18,10.77,0.01,0.06,2.9,1.05,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","ACCTATGAAGGCCCAG",2,19.17,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50R Y159G",2
"lib1","SARS-CoV-2","ACCTATGAGTGAGTAT",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R G86K Y121R N151R",4
"lib1","SARS-CoV-2","ACCTATGCGGGCAACT",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133T C158D Q176S T201S",4
"lib1","SARS-CoV-2","ACCTATGCTGAATCCC",2,79.78,10.9,0.13,0.07,2.86,1.1,0,">1 nonsynonymous","I2H E154R",2
"lib1","SARS-CoV-2","ACCTATGCTGCCGGAA",3,26.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P7W N40S A105F P177V",4
"lib1","SARS-CoV-2","ACCTATGGTTCCAAAA",7,1.94,NA,NA,NA,NA,NA,NA,"stop","I2Y F62Q V71K A105R G116*",5
"lib1","SARS-CoV-2","ACCTATGTAAAATCGG",4,128.6,6.36,-4.4,0.36,1.5,1.12,0.01,">1 nonsynonymous","T55Y Y66E S139H Q176W",4
"lib1","SARS-CoV-2","ACCTATTAATAATCAT",1,16.76,10.45,-0.32,0.1,2.96,1,0,">1 nonsynonymous","S147F G152Q",2
"lib1","SARS-CoV-2","ACCTATTCCGCTAGAA",2,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K P96K G101R T201N",4
"lib1","SARS-CoV-2","ACCTATTCCTGATAAA",1,43.64,8.71,-2.05,0.21,1.5,1.23,0.02,">1 nonsynonymous","L38P F44S",2
"lib1","SARS-CoV-2","ACCTATTCGAGAAGTG",4,54.76,7.11,-3.66,0.22,1.83,1.17,0.02,"1 nonsynonymous","C150N",1
"lib1","SARS-CoV-2","ACCTATTCTCAAAATT",1,23.75,10.37,-0.4,0.07,2.84,1.06,0,"1 nonsynonymous","Q79F",1
"lib1","SARS-CoV-2","ACCTATTCTTACTCAG",1,131.56,10.83,0.07,0.06,2.88,1.07,0,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","ACCTATTGCATGATTA",4,41.62,10.79,0.02,0.05,2.93,1.03,0,"1 nonsynonymous","V32R",1
"lib1","SARS-CoV-2","ACCTATTGGAAACCAT",5,58.39,10.29,-0.47,0.09,2.61,1.04,0,"1 nonsynonymous","E135C",1
"lib1","SARS-CoV-2","ACCTATTTCACCGAAT",5,45.06,10.78,0.02,0.07,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTATTTCATACCCA",4,66.91,10.63,-0.13,0.05,2.93,1.04,0,">1 nonsynonymous","L5E A33L K199Y",3
"lib1","SARS-CoV-2","ACCTATTTCTTAATAA",17,146.43,6,-4.76,0.91,1.5,1.18,0.01,">1 nonsynonymous","Y35N C61M N157F S184L",4
"lib1","SARS-CoV-2","ACCTATTTGAAAGCTT",4,4.88,NA,NA,NA,NA,NA,NA,"stop","N13Q G101* L122K C150D G174C",5
"lib1","SARS-CoV-2","ACCTATTTTATTTCCG",12,79.13,6,-4.76,1.55,1.5,1.2,0.01,">1 nonsynonymous","P82F V103L Y175S S200T",4
"lib1","SARS-CoV-2","ACCTCAAAATCCGGTA",2,31.21,10.77,0,0.06,2.94,1.03,0,">1 nonsynonymous","D98Y I104F K199S",3
"lib1","SARS-CoV-2","ACCTCAAAGACTGTGA",3,77.96,10.21,-0.55,0.03,2.99,1,0,">1 nonsynonymous","C31F F47I I104F K114S",4
"lib1","SARS-CoV-2","ACCTCAAATAAATCGG",7,41.71,6,-4.76,2,1.5,1.07,0,"1 nonsynonymous","L95N",1
"lib1","SARS-CoV-2","ACCTCAAATAGGAGTT",1,3.34,NA,NA,NA,NA,NA,NA,"stop","Y50* A81* A89V",3
"lib1","SARS-CoV-2","ACCTCAAATGACATAT",10,1.02,NA,NA,NA,NA,NA,NA,"stop","D90* I138K N157C T201A",4
"lib1","SARS-CoV-2","ACCTCAAATTTAATAT",3,45.22,8.58,-2.18,0.2,1.64,1.12,0.01,">1 nonsynonymous","S19Q D90F",2
"lib1","SARS-CoV-2","ACCTCAACACACAAAA",1,47.65,9.26,-1.5,0.06,2.87,1.07,0,">1 nonsynonymous","S129H N157S",2
"lib1","SARS-CoV-2","ACCTCAACACTTCAAC",4,9.59,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","K56D Y91P T170A",3
"lib1","SARS-CoV-2","ACCTCAACATCACTTA",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L E141K",2
"lib1","SARS-CoV-2","ACCTCAAGAAACAATA",1,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I T63N D90Y Y178C",4
"lib1","SARS-CoV-2","ACCTCAAGACGCACCA",1,26.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49E Y143K P197L",3
"lib1","SARS-CoV-2","ACCTCAAGGAGCAGTG",6,164.18,10.72,-0.04,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTCAAGTCCCGTCG",3,34.3,6,-4.76,2,1.5,1.29,0.03,"1 nonsynonymous","P161K",1
"lib1","SARS-CoV-2","ACCTCAATCATTATAC",8,2.91,NA,NA,NA,NA,NA,NA,"stop","R16* S129T S184E",3
"lib1","SARS-CoV-2","ACCTCAATTTAGACTA",2,62.49,10.65,-0.11,0.03,2.96,1,0,">1 nonsynonymous","N4E F126L",2
"lib1","SARS-CoV-2","ACCTCACAAAGTAGCT",4,6.65,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V71D G86P D90S",3
"lib1","SARS-CoV-2","ACCTCACAACTCACAT",13,100.84,7.41,-3.35,0.24,1.5,1.15,0.01,">1 nonsynonymous","I2V G86L",2
"lib1","SARS-CoV-2","ACCTCACACGACTTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35G D97* P197S",3
"lib1","SARS-CoV-2","ACCTCACAGGAACAAT",5,2.5,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","ACCTCACCAATTTCGT",2,53.29,9.74,-1.02,0.06,2.11,1.06,0,">1 nonsynonymous","E76L F99W",2
"lib1","SARS-CoV-2","ACCTCACTAACTAAGG",2,26.72,6.02,-4.74,1.27,1.5,1.23,0.03,">1 nonsynonymous","K56T L131G T201A",3
"lib1","SARS-CoV-2","ACCTCACTACTGTATA",9,92.27,6.14,-4.63,0.89,1.5,1.24,0.02,">1 nonsynonymous","S43K V77P V115R",3
"lib1","SARS-CoV-2","ACCTCAGAATATAATG",6,81.11,10.72,-0.04,0.08,2.87,1.09,0,"1 nonsynonymous","L111Q",1
"lib1","SARS-CoV-2","ACCTCAGACGATACCC",4,16.19,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A33S C49G",2
"lib1","SARS-CoV-2","ACCTCAGATGCCCTTG",5,98.97,10.52,-0.25,0.06,2.9,1.02,0,">1 nonsynonymous","R27M C61T G83R S200Q",4
"lib1","SARS-CoV-2","ACCTCAGCCCAAGGCA",1,80.07,10.88,0.11,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTCAGCTGTTGGAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R R127V N157T",3
"lib1","SARS-CoV-2","ACCTCAGGAATCAACT",7,57.46,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","ACCTCAGGATTGTTAT",10,48.35,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C49L Y93C N120I",3
"lib1","SARS-CoV-2","ACCTCAGTCCCTCGCG",8,128.69,8.66,-2.11,0.08,2.65,1.11,0,"1 nonsynonymous","S113K",1
"lib1","SARS-CoV-2","ACCTCATTAAAACTAG",9,75.21,8.4,-2.36,0.14,2,1.06,0.01,">1 nonsynonymous","R27K D112M K132M",3
"lib1","SARS-CoV-2","ACCTCATTGATATCAA",1,18.19,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","A105D K132I",2
"lib1","SARS-CoV-2","ACCTCATTTGTCCCAA",3,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P C61V D68M G83W D98M",5
"lib1","SARS-CoV-2","ACCTCCAAAGCCACCA",4,38.95,9.61,-1.16,0.16,2.26,1.03,0.01,">1 nonsynonymous","E10G S139V",2
"lib1","SARS-CoV-2","ACCTCCAACAATATCA",4,55.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10I R179S K198R",3
"lib1","SARS-CoV-2","ACCTCCACTAAACCAC",1,69.14,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28A F47Y G83H G101F",4
"lib1","SARS-CoV-2","ACCTCCACTTACAAAT",4,39.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K W106E S200A",3
"lib1","SARS-CoV-2","ACCTCCAGAACCGTTG",11,94.98,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N40Y N92T I138S",3
"lib1","SARS-CoV-2","ACCTCCATCCCCTATT",2,45.6,10.7,-0.06,0.06,2.98,1,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","ACCTCCATCTCCGTTT",2,22.89,8.03,-2.73,0.31,1.5,1.04,0.04,">1 nonsynonymous","I2A F47Y D59E D90E Y121K",5
"lib1","SARS-CoV-2","ACCTCCATTAATGATA",6,15.84,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","A33S G51V D90K C102V L122P P161L T201C",7
"lib1","SARS-CoV-2","ACCTCCCAAGGTAAAA",1,11.79,7.25,-3.51,0.66,1.5,1.03,0.07,">1 nonsynonymous","F70I Q84L N107V",3
"lib1","SARS-CoV-2","ACCTCCCACTTACATG",5,60.01,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","R25W T55Y F70P I142S",4
"lib1","SARS-CoV-2","ACCTCCCCAGCAACTA",5,1.38,NA,NA,NA,NA,NA,NA,"stop","E10* G51I A105M",3
"lib1","SARS-CoV-2","ACCTCCCCGAAAATCA",3,54.67,10.76,-0.01,0.08,2.98,1.01,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","ACCTCCCCTAAACACA",2,14.7,6.38,-4.38,0.9,2.44,1.18,0.01,">1 nonsynonymous","A18E G51R D68R F126Y",4
"lib1","SARS-CoV-2","ACCTCCCGGTTGATCT",1,3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACCTCCCTGTAATGAG",3,1.21,NA,NA,NA,NA,NA,NA,"stop","L57F Q84C T100P Y143*",4
"lib1","SARS-CoV-2","ACCTCCGACATAGTAA",2,35.83,6.87,-3.89,0.36,1.5,1.22,0.03,">1 nonsynonymous","T3K S45M Y143S V173M",4
"lib1","SARS-CoV-2","ACCTCCTATAGTTTTT",4,93.2,10.79,0.02,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTCCTGGTAATGTA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R P54G P96K",3
"lib1","SARS-CoV-2","ACCTCCTTACGAAAAC",6,106.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12L Q84L I88R",3
"lib1","SARS-CoV-2","ACCTCCTTATCTCTCT",6,148.42,7.68,-3.08,0.09,2.52,1.12,0,">1 nonsynonymous","T55A C61S Y119C F156T",4
"lib1","SARS-CoV-2","ACCTCCTTGACATAGT",2,44.55,10.43,-0.33,0.06,2.86,1.06,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","ACCTCCTTTAATCATT",2,24.98,10.62,-0.14,0.1,2.86,1.09,0,">1 nonsynonymous","T55Q D97S",2
"lib1","SARS-CoV-2","ACCTCGAAAACCAAAA",2,38.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15L E141Y C158V",3
"lib1","SARS-CoV-2","ACCTCGAACAAAACTC",2,60.67,8.01,-2.76,0.28,1.5,1.21,0.03,">1 nonsynonymous","D97V N107T Q176R",3
"lib1","SARS-CoV-2","ACCTCGAACGAATCTA",5,124.25,10.68,-0.08,0.03,2.93,1.02,0,">1 nonsynonymous","N120S E141T",2
"lib1","SARS-CoV-2","ACCTCGAACTGTTCTT",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S G9L P82D V103F N120L N151C",6
"lib1","SARS-CoV-2","ACCTCGACACGTGCAT",2,22.06,9.72,-1.04,0.17,2.26,1.07,0.01,">1 nonsynonymous","S45K K94N",2
"lib1","SARS-CoV-2","ACCTCGATAAAAAACC",4,113.66,10.35,-0.41,0.05,2.95,1,0,">1 nonsynonymous","G51S C61S",2
"lib1","SARS-CoV-2","ACCTCGATGGAGTAAT",3,29.42,8.38,-2.38,0.26,2.35,1.01,0.03,">1 nonsynonymous","K56R T63L Y175A",3
"lib1","SARS-CoV-2","ACCTCGCAAAAGATAA",13,262.3,8.48,-2.29,0.1,2.7,1.07,0,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","ACCTCGCATGCTCAAA",7,119.36,10.62,-0.14,0.04,2.92,1.03,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","ACCTCGCGATAAACCA",3,8.09,7.38,-3.39,0.57,1.5,1,0.06,">1 nonsynonymous","T3V L38P D59S V77M Y93V C102G",6
"lib1","SARS-CoV-2","ACCTCGCTATGTCATC",5,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Q84R P96M",3
"lib1","SARS-CoV-2","ACCTCGCTCTTGAAAT",1,18.72,9.97,-0.79,0.22,2.44,1.05,0.03,">1 nonsynonymous","T15D D98A L131N",3
"lib1","SARS-CoV-2","ACCTCGGATATACTTC",1,8.34,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N92P K114S Y121C L162S",4
"lib1","SARS-CoV-2","ACCTCGGTCTAGATCT",3,108.39,10.82,0.05,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTCGGTTAGTTACG",12,30.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15Y A33D S45L C61D",4
"lib1","SARS-CoV-2","ACCTCGTCCTATTCGA",2,21.05,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","Y50I K56V W106P",3
"lib1","SARS-CoV-2","ACCTCGTCGACCTGTC",1,11.12,10.59,-0.18,0.13,2.88,1,0.01,">1 nonsynonymous","I142Y G152D",2
"lib1","SARS-CoV-2","ACCTCTAAAAACATAT",5,33.95,8.38,-2.38,0.22,2.05,1.06,0.02,">1 nonsynonymous","Y91W F156Q E186L",3
"lib1","SARS-CoV-2","ACCTCTAAAACCCTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I104* F160S",2
"lib1","SARS-CoV-2","ACCTCTAAATCCTAAC",14,38.14,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6P F12Q F99N T140R T201K",5
"lib1","SARS-CoV-2","ACCTCTAAGCCTCTAT",1,9.6,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C6V I28S V37T T55A N157F S200L",6
"lib1","SARS-CoV-2","ACCTCTACGCCGCCAA",2,38.94,6,-4.76,1.43,1.5,1.13,0.03,">1 nonsynonymous","G51C A105L S113L F134T",4
"lib1","SARS-CoV-2","ACCTCTACTTAATCGA",5,128.92,9.04,-1.73,0.15,1.78,1.15,0.01,">1 nonsynonymous","F44P A89N T201L",3
"lib1","SARS-CoV-2","ACCTCTAGAACAAAGC",2,7.43,6,-4.76,1.44,1.5,1.09,0.02,">1 nonsynonymous","G86R Y91P",2
"lib1","SARS-CoV-2","ACCTCTAGACATATGT",6,171.89,10.71,-0.05,0.04,2.95,1,0,">1 nonsynonymous","A33P K56Q",2
"lib1","SARS-CoV-2","ACCTCTATCGAGCGAG",4,88.53,10.7,-0.06,0.05,2.91,1.03,0,">1 nonsynonymous","Q84T N171S A190G",3
"lib1","SARS-CoV-2","ACCTCTATTACGGTAG",2,0.6,NA,NA,NA,NA,NA,NA,"stop","T15S Y35L V77* P149R A190G",5
"lib1","SARS-CoV-2","ACCTCTCAATATTATG",1,15.34,7.55,-3.21,0.34,1.5,1.04,0.05,">1 nonsynonymous","T3A R27L A81E P161A G196V",5
"lib1","SARS-CoV-2","ACCTCTCTAGAATCGT",9,56.92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V103W K128S F160R",3
"lib1","SARS-CoV-2","ACCTCTGACAGGACTC",1,43.58,7.14,-3.62,0.24,1.94,1.17,0.01,">1 nonsynonymous","G9S Y175T",2
"lib1","SARS-CoV-2","ACCTCTGATTCTCAAG",7,113.45,10.18,-0.58,0.06,2.85,1,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","ACCTCTGCTGACTAAT",14,133.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N107A F134V E141Y N151T",4
"lib1","SARS-CoV-2","ACCTCTGTGTACATTC",2,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L K48L I104S Y123A",4
"lib1","SARS-CoV-2","ACCTCTTAGTCCTCTT",6,94.63,9.99,-0.78,0.06,2.72,1.02,0,">1 nonsynonymous","I104S L122Q G174P",3
"lib1","SARS-CoV-2","ACCTCTTATGGAATTA",5,25.38,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","T15D Y39K P82F",3
"lib1","SARS-CoV-2","ACCTCTTATTAAAGCC",2,2.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63N",1
"lib1","SARS-CoV-2","ACCTCTTCCAGAACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* V37H I72A K114R Y119F",5
"lib1","SARS-CoV-2","ACCTCTTGTATGAAAG",1,0.56,NA,NA,NA,NA,NA,NA,"stop","C49H D97K W106* Y123N S139W L188M",6
"lib1","SARS-CoV-2","ACCTGAAAAGAATGCT",6,0.62,NA,NA,NA,NA,NA,NA,"stop","A33S D112*",2
"lib1","SARS-CoV-2","ACCTGAAATTATCTCG",3,3.88,NA,NA,NA,NA,NA,NA,"stop","D90M G101S N118C L131*",4
"lib1","SARS-CoV-2","ACCTGAACAGGACTAT",3,25.15,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","E76S K87E F99C G116K T148S",5
"lib1","SARS-CoV-2","ACCTGAACCGAGGGTA",6,56.24,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N4E Y93D",2
"lib1","SARS-CoV-2","ACCTGAAGAACCTAAT",3,99.91,10.14,-0.63,0.05,2.73,1.02,0,">1 nonsynonymous","S41P T85Q T100R Y121H",4
"lib1","SARS-CoV-2","ACCTGAAGCAGAACAA",1,5.65,8.36,-2.4,0.4,1.5,1,0.07,">1 nonsynonymous","L5P E135M L162K",3
"lib1","SARS-CoV-2","ACCTGAAGCTATAAGG",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S E141M Y175L L183T",4
"lib1","SARS-CoV-2","ACCTGAAGGGGCCGAA",2,50.2,10.65,-0.11,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTGAATATACTAGA",13,180.88,10.72,-0.04,0.06,2.88,1.08,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","ACCTGAATATTGGTGC",2,20.17,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N40G G116I R124P E154C",4
"lib1","SARS-CoV-2","ACCTGAATCCGTGTCA",4,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119S N171K",2
"lib1","SARS-CoV-2","ACCTGAATCTTGCATG",1,8.95,9.57,-1.2,0.24,1.69,1.21,0.04,"1 nonsynonymous","S69D",1
"lib1","SARS-CoV-2","ACCTGACACAGTGACC",7,6.58,NA,NA,NA,NA,NA,NA,"stop","L38Y N58* Y119R",3
"lib1","SARS-CoV-2","ACCTGACCACATATGA",16,179.8,6.07,-4.69,0.85,1.5,1.17,0.02,">1 nonsynonymous","A33C N58R Q84D N120V",4
"lib1","SARS-CoV-2","ACCTGACCCAATCTCC",2,0.88,NA,NA,NA,NA,NA,NA,"stop","F17* K87I L122S V182P",4
"lib1","SARS-CoV-2","ACCTGACCTATTGTTT",1,46.17,9.93,-0.84,0.12,2.49,1,0,">1 nonsynonymous","S19G V37R F62C",3
"lib1","SARS-CoV-2","ACCTGACTACGCCGGC",11,99.35,8.55,-2.21,0.16,1.51,1.13,0.01,">1 nonsynonymous","F12Y C31H N64I",3
"lib1","SARS-CoV-2","ACCTGAGAACCCTGTA",1,8.8,9.34,-1.42,0.22,1.62,1.04,0.02,">1 nonsynonymous","C31S D98Y E141M",3
"lib1","SARS-CoV-2","ACCTGAGACATGGAGA",1,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R I104S K132V G152P",4
"lib1","SARS-CoV-2","ACCTGAGATAATCTGA",1,9.39,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y119S C158V",2
"lib1","SARS-CoV-2","ACCTGAGATATAAAAA",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V R25S R179Q",3
"lib1","SARS-CoV-2","ACCTGAGATTATTTGT",3,59.52,8.59,-2.18,0.16,1.68,1.12,0.01,">1 nonsynonymous","N1V N118C G152S H189I K199N",5
"lib1","SARS-CoV-2","ACCTGAGCAAAATCGT",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G N13V",2
"lib1","SARS-CoV-2","ACCTGAGCCAACCCTA",2,10.37,10.25,-0.52,0.21,2.28,1,0.01,">1 nonsynonymous","A33K N171C",2
"lib1","SARS-CoV-2","ACCTGATAAGCCTGCG",11,50.35,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C49T D97N S113C",3
"lib1","SARS-CoV-2","ACCTGATATAAAAAAT",1,18.12,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N64I G86N C102Y W106T Y119Q",5
"lib1","SARS-CoV-2","ACCTGATCAACACGCT",4,105.86,10.59,-0.18,0.03,2.93,1.03,0,">1 nonsynonymous","Y39L A81C",2
"lib1","SARS-CoV-2","ACCTGATCTGCATAAT",3,69.24,9.69,-1.07,0.09,2.71,1.08,0,">1 nonsynonymous","D75E V115N S129L",3
"lib1","SARS-CoV-2","ACCTGATGGGCGAGGC",2,20.3,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Y93S C102W N120T S129A P149L F160D",6
"lib1","SARS-CoV-2","ACCTGATTCAACAACA",1,15.42,10.78,0.02,0.08,2.9,1.04,0,"1 nonsynonymous","K128H",1
"lib1","SARS-CoV-2","ACCTGCAAACACCGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100F C150T",2
"lib1","SARS-CoV-2","ACCTGCACTTAACATG",7,155.74,8.26,-2.5,0.16,2.51,1.05,0.01,"1 nonsynonymous","Y175L",1
"lib1","SARS-CoV-2","ACCTGCAGAACCACTA",1,16.81,9.07,-1.7,0.2,2.01,1.06,0.03,">1 nonsynonymous","C6V V37S N107S",3
"lib1","SARS-CoV-2","ACCTGCATCATAGTGA",4,14.95,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L60R S113I R124F N130W G155F",5
"lib1","SARS-CoV-2","ACCTGCCATGATCACG",5,12.58,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R78V P82L T100L G117W H189I",5
"lib1","SARS-CoV-2","ACCTGCCGGAGCCCAC",2,42.74,9.74,-1.02,0.12,2.05,1.07,0.01,">1 nonsynonymous","A14V S41N P96D T100L N120Q",5
"lib1","SARS-CoV-2","ACCTGCCGGCCAGGGG",4,57.32,10.65,-0.11,0.05,2.99,1,0,">1 nonsynonymous","N64E V115S K198C",3
"lib1","SARS-CoV-2","ACCTGCCTACCTGCTG",3,0.6,NA,NA,NA,NA,NA,NA,"stop","L60V L122* P133L",3
"lib1","SARS-CoV-2","ACCTGCCTGGAACGTA",1,13.87,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C6R N157T",2
"lib1","SARS-CoV-2","ACCTGCGATGCAGATA",4,81.13,10.75,-0.02,0.07,2.93,1.05,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","ACCTGCGCAATACAAC",3,22.43,10.69,-0.08,0.23,2.67,1.07,0.02,"1 nonsynonymous","Y123S",1
"lib1","SARS-CoV-2","ACCTGCGCCATGACGT",1,17.07,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","W106Q P133L T201W",3
"lib1","SARS-CoV-2","ACCTGCGCGAAATTGT",1,57.85,9.19,-1.58,0.06,2.77,1.05,0,">1 nonsynonymous","N4T T100N A145F",3
"lib1","SARS-CoV-2","ACCTGCGGATGGACAT",2,41.67,10.76,-0.01,0.05,2.97,1.02,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","ACCTGCGTATCTCAAG",5,0.05,NA,NA,NA,NA,NA,NA,"stop","A33R D68* G116S R124H Y159S",5
"lib1","SARS-CoV-2","ACCTGCGTTAATTATT",7,111.19,10.71,-0.06,0.05,2.87,1.08,0,">1 nonsynonymous","G9H C61K",2
"lib1","SARS-CoV-2","ACCTGCTAATCAAAAC",1,13.88,6.81,-3.96,0.39,1.5,1.08,0.02,">1 nonsynonymous","E10S Y21T C31L A42M C61A",5
"lib1","SARS-CoV-2","ACCTGCTCCTCCGTAT",5,55.5,9.83,-0.94,0.13,2.16,1.05,0.01,">1 nonsynonymous","I88M T148V",2
"lib1","SARS-CoV-2","ACCTGCTCTGTCTGAA",2,78.01,10.29,-0.47,0.04,2.94,1,0,">1 nonsynonymous","F62V G155E",2
"lib1","SARS-CoV-2","ACCTGCTGCGCCTAGT",4,0.65,NA,NA,NA,NA,NA,NA,"stop","G86C P96L T100E A145*",4
"lib1","SARS-CoV-2","ACCTGCTGCTATCTCA",2,20.64,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","Y21H I80L L95T W106F T201P",5
"lib1","SARS-CoV-2","ACCTGCTTCATAATGC",2,40.13,6,-4.76,1.36,1.5,1.12,0.03,">1 nonsynonymous","D98S Y121T L162S",3
"lib1","SARS-CoV-2","ACCTGGAACCTAAGTT",10,118.27,10.19,-0.58,0.04,2.7,1.04,0,"1 nonsynonymous","P133K",1
"lib1","SARS-CoV-2","ACCTGGAATATGCCGA",1,7.63,10.78,0.02,0.11,2.91,1.05,0,">1 nonsynonymous","L60V T201L",2
"lib1","SARS-CoV-2","ACCTGGATGTTCTTGG",2,38.18,8.12,-2.64,0.2,2.05,1.13,0.01,">1 nonsynonymous","I2K A33L K48D L122K N157Y S164Y",6
"lib1","SARS-CoV-2","ACCTGGCAATGATGCA",4,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R D97M E141V",3
"lib1","SARS-CoV-2","ACCTGGCAGCAAACAA",2,5.76,9.2,-1.57,0.36,2.17,1.35,0.03,">1 nonsynonymous","S29M F44N L60T T148L",4
"lib1","SARS-CoV-2","ACCTGGCTTACCACCT",1,47.06,10.88,0.11,0.07,2.94,1,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","ACCTGGCTTCAAACTA",4,12.79,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12D W23S Y35I G101R G116P P149Q",6
"lib1","SARS-CoV-2","ACCTGGGAACCCACCG",3,91.58,10.19,-0.57,0.05,2.96,1.02,0,">1 nonsynonymous","T63M F156I",2
"lib1","SARS-CoV-2","ACCTGGGGCGCAAAGA",1,10.86,10.63,-0.13,0.07,2.97,1,0,">1 nonsynonymous","Y123L I138T",2
"lib1","SARS-CoV-2","ACCTGGGTTGCACCGG",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M A14H K87Y D98W T140V F167S",6
"lib1","SARS-CoV-2","ACCTGTAAAAATCCAA",1,40.77,6.34,-4.43,0.7,1.5,1.22,0.03,">1 nonsynonymous","C31I S53P N64R Q176M",4
"lib1","SARS-CoV-2","ACCTGTAAAGATAAAA",3,11.3,6.58,-4.19,2,1.5,1.07,0.01,">1 nonsynonymous","T63H A105E",2
"lib1","SARS-CoV-2","ACCTGTAAGAAAAACG",2,4.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83W",1
"lib1","SARS-CoV-2","ACCTGTACGCCATATA",5,99.29,9.46,-1.31,0.14,2.27,1.11,0.01,">1 nonsynonymous","D98K V115G P149W",3
"lib1","SARS-CoV-2","ACCTGTACTACCGATT",2,18.51,9.16,-1.6,0.29,1.5,1,0.04,">1 nonsynonymous","E10Y G51A",2
"lib1","SARS-CoV-2","ACCTGTATTCAGGGGC",2,7.34,6,-4.76,2,3,1.04,0,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","ACCTGTCAAGTATTTT",1,29.04,10.62,-0.14,0.07,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTGTCCAAAGTAGA",2,6.32,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","D97L S139N E154V L162Y F167C",5
"lib1","SARS-CoV-2","ACCTGTCTAAGACTAC",5,23.35,6.07,-4.69,0.74,1.58,1.1,0.01,">1 nonsynonymous","F12C A81L R127S R136W",4
"lib1","SARS-CoV-2","ACCTGTCTCTATTACA",1,21.41,6.43,-4.34,0.49,1.5,1.06,0.02,">1 nonsynonymous","N4M Y35I F47L V71L I88Y N120Q",6
"lib1","SARS-CoV-2","ACCTGTCTTACGCGTA",12,177.36,10.54,-0.22,0.05,2.88,1.05,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","ACCTGTCTTGAATATT",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S45A P177Q",3
"lib1","SARS-CoV-2","ACCTGTGAAGAACTAT",1,42.9,10.41,-0.35,0.07,2.87,1.09,0,"1 nonsynonymous","K26N",1
"lib1","SARS-CoV-2","ACCTGTGACTTTATAC",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17P F62E L125N P149L",4
"lib1","SARS-CoV-2","ACCTGTGATAGTATTT",3,33.73,9.75,-1.01,0.11,1.88,1.06,0,"1 nonsynonymous","P82A",1
"lib1","SARS-CoV-2","ACCTGTTAACTAGCTA",1,7.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6V L38T G116R Y178K",4
"lib1","SARS-CoV-2","ACCTGTTAATAGGATT",5,61.18,6.86,-3.91,0.4,1.5,1.13,0.03,">1 nonsynonymous","V77W Y121G K128L",3
"lib1","SARS-CoV-2","ACCTGTTAGCTACGTC",1,22,10.6,-0.16,0.06,2.93,1,0,">1 nonsynonymous","N30S D59N",2
"lib1","SARS-CoV-2","ACCTGTTCGACGACCA",4,95.52,10.52,-0.24,0.1,2.76,1.03,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","ACCTGTTTGATTCTAT",9,84.91,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6L C61L G74P E154P",4
"lib1","SARS-CoV-2","ACCTTAAAAGGTTTCG",3,99.51,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12W R25V V115G L122R I138G T170G",6
"lib1","SARS-CoV-2","ACCTTAAACCACAGCT",1,7.92,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V77M N110S Y123A G152V V173I",5
"lib1","SARS-CoV-2","ACCTTAAACGAATTGA",4,75.3,10.48,-0.28,0.05,2.89,1.04,0,">1 nonsynonymous","A42R F134C",2
"lib1","SARS-CoV-2","ACCTTAAAGGTAATCA",5,21.03,9.16,-1.61,0.39,1.5,1,0.07,">1 nonsynonymous","S41I P82S",2
"lib1","SARS-CoV-2","ACCTTAAATAATAGAC",6,2.07,NA,NA,NA,NA,NA,NA,"stop","E10N A14* N30M V77Q",4
"lib1","SARS-CoV-2","ACCTTAAGACATTGCT",3,50.06,10.32,-0.45,0.07,2.94,1,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","ACCTTAAGAGGTTCTT",2,10.53,6,-4.76,1.82,1.5,1.11,0.03,">1 nonsynonymous","S45L L95I I104T R136G G146R F156L",6
"lib1","SARS-CoV-2","ACCTTAAGATTAGCAC",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y T15L K87S C102L T201S",5
"lib1","SARS-CoV-2","ACCTTAAGCAACTCAA",3,28.69,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","G9L I104Q S129V C150M",4
"lib1","SARS-CoV-2","ACCTTAAGGTATGATA",6,41.71,6.32,-4.44,0.45,1.5,1.14,0.01,">1 nonsynonymous","D68M L122S R136W Y143T T148I",5
"lib1","SARS-CoV-2","ACCTTAAGTTTGTAAA",1,1.86,NA,NA,NA,NA,NA,NA,"stop","Y93* E141R",2
"lib1","SARS-CoV-2","ACCTTAATAACGATAT",6,98.71,8.81,-1.95,0.2,1.5,1.12,0.02,">1 nonsynonymous","F8R I138C F160Y",3
"lib1","SARS-CoV-2","ACCTTAATAATTATAT",3,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8H Y119L",2
"lib1","SARS-CoV-2","ACCTTAATAGGATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* N64G F126G",3
"lib1","SARS-CoV-2","ACCTTACAAGATCCAG",3,6.22,6.75,-4.01,0.15,1.5,1.05,0,">1 nonsynonymous","G152D Y165D",2
"lib1","SARS-CoV-2","ACCTTACACCTTAAAA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","F17* K56E G116R",3
"lib1","SARS-CoV-2","ACCTTACACGTTAATC",5,14.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41L T46F K56S D68N",4
"lib1","SARS-CoV-2","ACCTTACACTCGAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","D34H T55W S129* G152Y F167A",5
"lib1","SARS-CoV-2","ACCTTACACTTCAAAT",1,8.57,11.04,0.28,0.14,2.93,1,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","ACCTTACAGTTCCACT",4,112.38,10.39,-0.38,0.05,2.97,1,0,"1 nonsynonymous","F156H",1
"lib1","SARS-CoV-2","ACCTTACATGTGGAAT",4,68.13,8.63,-2.13,0.09,2.81,1.04,0,">1 nonsynonymous","V37W S113Y",2
"lib1","SARS-CoV-2","ACCTTACCACGATTCA",4,41.79,6.72,-4.04,0.58,1.5,1.21,0.05,">1 nonsynonymous","T15W N107T T201E",3
"lib1","SARS-CoV-2","ACCTTACCCTATTAAT",4,33.75,9.43,-1.34,0.19,1.86,1.09,0.02,">1 nonsynonymous","L38T D97L L122C S200H",4
"lib1","SARS-CoV-2","ACCTTACCGGAAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86S D98N V153L C158*",4
"lib1","SARS-CoV-2","ACCTTACCGTACGCTA",3,42.91,10.45,-0.32,0.05,2.91,1.02,0,"1 nonsynonymous","Y91I",1
"lib1","SARS-CoV-2","ACCTTACCTGCTAGAA",4,23.02,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N92S C158Y",2
"lib1","SARS-CoV-2","ACCTTACGCGCGCGGG",13,218.2,9.07,-1.69,0.15,1.76,1.12,0.01,">1 nonsynonymous","S69R T148G N151T",3
"lib1","SARS-CoV-2","ACCTTACGGAGTATAG",8,88.57,10.73,-0.04,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTACTAATAGTAT",3,8.49,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","C6K W23K C102F N171K V173I",5
"lib1","SARS-CoV-2","ACCTTACTGGACTTTG",1,11.81,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","V37P S43Y P177Q",3
"lib1","SARS-CoV-2","ACCTTAGAAACTTACG",3,1.45,NA,NA,NA,NA,NA,NA,"stop","G9* D137M E154Q L162F Y178H",5
"lib1","SARS-CoV-2","ACCTTAGGGAAAAAAC",3,65.05,10.01,-0.76,0.09,2.52,1.08,0,">1 nonsynonymous","N40V C61Y",2
"lib1","SARS-CoV-2","ACCTTAGGGAACTAAG",2,82.91,7.73,-3.04,0.13,1.78,1.13,0.01,"1 nonsynonymous","Y175I",1
"lib1","SARS-CoV-2","ACCTTAGTACTCGGTG",2,17.98,6.21,-4.56,0.64,1.5,1.1,0.02,">1 nonsynonymous","Y39L Y143I Y165L",3
"lib1","SARS-CoV-2","ACCTTAGTATGACAAA",9,60.77,10.05,-0.71,0.07,2.9,1,0,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","ACCTTAGTCAGGACTA",3,52.29,10.66,-0.1,0.06,2.85,1.09,0,"1 nonsynonymous","R78V",1
"lib1","SARS-CoV-2","ACCTTATAAAGTTGTA",9,50.31,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","S53F Q84P E141H C150L P169S",5
"lib1","SARS-CoV-2","ACCTTATACCATATTA",2,33.9,7.52,-3.25,0.36,1.5,1.09,0.05,">1 nonsynonymous","F12A R136E",2
"lib1","SARS-CoV-2","ACCTTATATGCAAATA",1,61.63,9.47,-1.29,0.17,2.23,1.14,0.01,">1 nonsynonymous","N64C Q176L",2
"lib1","SARS-CoV-2","ACCTTATTAAACGCTG",3,32.43,8.24,-2.52,0.16,2.68,1.09,0.01,">1 nonsynonymous","L125K T148L A192V",3
"lib1","SARS-CoV-2","ACCTTATTGGGTACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","S108T T148* L188I T201K",4
"lib1","SARS-CoV-2","ACCTTCAACAGTCATA",5,130.41,10.85,0.09,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTCACCTAGATAG",3,0.32,NA,NA,NA,NA,NA,NA,"stop","G51C Y91* S200A",3
"lib1","SARS-CoV-2","ACCTTCACGGTCCATG",1,27.4,10.71,-0.05,0.1,2.89,1.06,0,">1 nonsynonymous","F134H V153L",2
"lib1","SARS-CoV-2","ACCTTCACTCCACGGT",1,29.51,10.83,0.06,0.15,2.97,1.01,0.01,"1 nonsynonymous","L188Q",1
"lib1","SARS-CoV-2","ACCTTCAGAGCGAAAA",8,87.98,6.37,-4.4,0.34,1.5,1.15,0.01,">1 nonsynonymous","N64K L95Q P149M",3
"lib1","SARS-CoV-2","ACCTTCAGTTATTACA",3,80.33,8.22,-2.54,0.17,1.65,1.16,0.01,">1 nonsynonymous","G9A G155L Y178L",3
"lib1","SARS-CoV-2","ACCTTCATATGCATAT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","S19K C49* Y178H",3
"lib1","SARS-CoV-2","ACCTTCCACGCGCGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103E",1
"lib1","SARS-CoV-2","ACCTTCCCACGCATTA",2,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C L122A T170F",3
"lib1","SARS-CoV-2","ACCTTCCCCTCACGAA",11,114.25,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","K56W A81N R124E V173D",4
"lib1","SARS-CoV-2","ACCTTCCCTGAACGAT",2,5.39,9.46,-1.3,0.29,1.61,1.21,0.02,">1 nonsynonymous","D97I L122M D137N",3
"lib1","SARS-CoV-2","ACCTTCCTTAGGGGAC",1,2.45,NA,NA,NA,NA,NA,NA,"stop","V11D D34C G83C Y91* Y119K",5
"lib1","SARS-CoV-2","ACCTTCGAGTCTATAA",3,12.35,10.69,-0.07,0.08,2.93,1.02,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","ACCTTCGATGGTGTTA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","Y91G S129L G172*",3
"lib1","SARS-CoV-2","ACCTTCGCACAGCCAA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","V32R S45C Y91K V103* N118S",5
"lib1","SARS-CoV-2","ACCTTCGCCTAAAATG",5,143.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N1T L38V G86V V173F",4
"lib1","SARS-CoV-2","ACCTTCGGAAACTCCC",4,151.54,10.18,-0.58,0.04,2.89,1,0,">1 nonsynonymous","E10C G83N",2
"lib1","SARS-CoV-2","ACCTTCGGCTGCTAAC",3,26.59,10.11,-0.65,0.19,2.41,1.05,0.01,">1 nonsynonymous","F12I S19P T63P I104L",4
"lib1","SARS-CoV-2","ACCTTCTAAAAAGAAT",3,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L A18R G101T",3
"lib1","SARS-CoV-2","ACCTTCTCTCCACGCA",1,37.99,10.91,0.14,0.09,2.86,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCTTCTGAATTTCCG",5,1.05,NA,NA,NA,NA,NA,NA,"stop","V65R L162*",2
"lib1","SARS-CoV-2","ACCTTCTTATAATGTC",6,29.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1I A14R N30T S36F S113N",5
"lib1","SARS-CoV-2","ACCTTCTTGGGATAAA",2,26.35,9.4,-1.36,0.18,1.76,1.2,0.01,">1 nonsynonymous","K56S V77K",2
"lib1","SARS-CoV-2","ACCTTGAAAGTATAGG",7,46.46,10.89,0.12,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTGAATACGATGG",2,20.33,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","D112T R136Y",2
"lib1","SARS-CoV-2","ACCTTGAATTTTAAGC",7,4.59,NA,NA,NA,NA,NA,NA,"stop","D59S Y91C L122G K128F T140I N157Q F167* Y175K",8
"lib1","SARS-CoV-2","ACCTTGATAGGTGCCA",1,8.82,9.51,-1.25,0.35,1.5,1.1,0.07,">1 nonsynonymous","L38V Y91N F185W K198A",4
"lib1","SARS-CoV-2","ACCTTGCACCATCCTA",2,26.89,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F126S G172R",2
"lib1","SARS-CoV-2","ACCTTGGAATAACAAT",10,189.7,10.55,-0.21,0.03,2.88,1.05,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","ACCTTGTAACTTATGT",7,63.39,9.16,-1.61,0.1,2.11,1.13,0,">1 nonsynonymous","N58I S129C S139T P169M",4
"lib1","SARS-CoV-2","ACCTTGTATTTATGAA",4,78.46,6.25,-4.51,0.56,1.5,1.2,0.01,">1 nonsynonymous","D34L K128F T170R",3
"lib1","SARS-CoV-2","ACCTTGTCGAACCACC",4,14.47,6,-4.76,2,3,1.1,0,">1 nonsynonymous","Y93L G155V T170F",3
"lib1","SARS-CoV-2","ACCTTGTTACTTAATA",5,27.91,10.58,-0.19,0.07,2.97,1,0,"1 nonsynonymous","Y143H",1
"lib1","SARS-CoV-2","ACCTTTAAATGACTAC",3,53.09,10.71,-0.05,0.09,2.93,1,0,"1 nonsynonymous","E186S",1
"lib1","SARS-CoV-2","ACCTTTAACAACTCCA",6,7.33,8.38,-2.38,0.27,1.5,1.13,0.02,">1 nonsynonymous","P82S D97L",2
"lib1","SARS-CoV-2","ACCTTTAACATTGGTG",3,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98T L183R",2
"lib1","SARS-CoV-2","ACCTTTAACTGAAAGT",4,66.85,10.12,-0.64,0.09,2.19,1.04,0,">1 nonsynonymous","A14S Y123L P149L",3
"lib1","SARS-CoV-2","ACCTTTAAGGAATTGC",2,63.85,10.75,-0.01,0.05,2.92,1.06,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","ACCTTTACAACGCCCT",12,61.67,8.61,-2.16,0.15,1.88,1.15,0.01,">1 nonsynonymous","N13S L60V K87T N107K",4
"lib1","SARS-CoV-2","ACCTTTACAATAATCG",2,25.43,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","Y39M Y121S Y143R S147T",4
"lib1","SARS-CoV-2","ACCTTTACATTAAATG",4,20.45,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R73A F99P W106F T140R L188P",5
"lib1","SARS-CoV-2","ACCTTTACCAGTAAAA",5,302.55,10.79,0.02,0.05,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ACCTTTATACACCCCA",3,116.56,8.93,-1.83,0.08,2.76,1.18,0,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","ACCTTTATCTTTAAGC",2,47.16,8.89,-1.88,0.18,1.71,1.09,0.01,">1 nonsynonymous","G9L N40P D137E",3
"lib1","SARS-CoV-2","ACCTTTATTTAGTGCT",1,11.1,9.99,-0.77,0.15,2.26,1.02,0.02,">1 nonsynonymous","I2M A14L V37W N151T",4
"lib1","SARS-CoV-2","ACCTTTCAAATGGTCA",1,51.04,10.29,-0.48,0.05,2.85,1.06,0,">1 nonsynonymous","A22I K87I I138S",3
"lib1","SARS-CoV-2","ACCTTTCAAGACTATC",6,78.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R A105H",2
"lib1","SARS-CoV-2","ACCTTTCACAATGAAT",15,24.26,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D34F S41N G101M",3
"lib1","SARS-CoV-2","ACCTTTCATACTTCAT",1,45.91,10.67,-0.1,0.04,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTTCATTGCTCAG",4,22.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N92L K128V",2
"lib1","SARS-CoV-2","ACCTTTCCGACAAAAA",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100L C195T",2
"lib1","SARS-CoV-2","ACCTTTCGCTGCTGAG",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T46M N92T N130R",4
"lib1","SARS-CoV-2","ACCTTTCTAATCTTAA",1,6.53,6.61,-4.15,0.8,1.5,1.25,0.07,">1 nonsynonymous","N4C F99H K132N",3
"lib1","SARS-CoV-2","ACCTTTCTACCGAAAC",5,50.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I88R G152S",2
"lib1","SARS-CoV-2","ACCTTTCTCATGGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S41N L60Y",3
"lib1","SARS-CoV-2","ACCTTTGCGCATACTT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M T15C",2
"lib1","SARS-CoV-2","ACCTTTGCGTCAATAG",4,126.64,10.79,0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTTGCTCTTTTAA",3,69.06,10.84,0.07,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTTGGAGGATGAT",1,15.55,7.92,-2.85,0.28,1.86,1.25,0.03,">1 nonsynonymous","C6G K56M A81L S129T I138D",5
"lib1","SARS-CoV-2","ACCTTTGGAGTGTGAT",3,12.15,10.83,0.06,0.09,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACCTTTGGCCGATTCG",13,228.95,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L57M S113V Y143L",3
"lib1","SARS-CoV-2","ACCTTTTACCACTCAT",3,22.68,6.45,-4.32,0.52,1.5,1.17,0.02,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","ACCTTTTCCTCATAAA",7,65,9.15,-1.61,0.22,1.5,1,0.03,">1 nonsynonymous","N4W L60S Y165F",3
"lib1","SARS-CoV-2","ACCTTTTCGGACCGAA",1,6.04,9.39,-1.37,0.31,2.81,1,0.04,">1 nonsynonymous","N13A V37Y S113G",3
"lib1","SARS-CoV-2","ACCTTTTCTTGACTAT",2,83.86,10.35,-0.42,0.05,2.92,1,0,">1 nonsynonymous","E10V L60Q",2
"lib1","SARS-CoV-2","ACCTTTTTCCCAGAAG",2,24.75,8.97,-1.79,0.26,1.5,1.21,0.03,">1 nonsynonymous","N64F V77F",2
"lib1","SARS-CoV-2","ACGAAAAACAGTACCG",1,36.9,8.34,-2.43,0.13,2.23,1.01,0.01,">1 nonsynonymous","V37E G74D",2
"lib1","SARS-CoV-2","ACGAAAAACGTTAAAT",1,48.62,9.98,-0.78,0.12,1.91,1.03,0.01,">1 nonsynonymous","L5N V65S E135H",3
"lib1","SARS-CoV-2","ACGAAAAAGGCGTCCG",2,67.37,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S45P V77M P169R Q176Y",4
"lib1","SARS-CoV-2","ACGAAAAATACACTAA",12,4.95,NA,NA,NA,NA,NA,NA,"stop","C31S V37E D98Y N110A L131*",5
"lib1","SARS-CoV-2","ACGAAAAATACGTACT",10,118.06,9.55,-1.21,0.06,1.97,1.05,0,"1 nonsynonymous","V173T",1
"lib1","SARS-CoV-2","ACGAAAAATGTACACA",4,63.47,10.57,-0.2,0.03,2.96,1,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","ACGAAAACACAAAGAA",7,610.68,9.89,-0.87,0.03,2.87,1.04,0,">1 nonsynonymous","K87R G155V",2
"lib1","SARS-CoV-2","ACGAAAACATACAGCA",3,4.81,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","ACGAAAACATCTGAGG",1,22.65,10.7,-0.06,0.1,2.85,1.12,0,">1 nonsynonymous","V32I F47I N120E",3
"lib1","SARS-CoV-2","ACGAAAACCGCAAAGC",2,39.11,10.17,-0.6,0.11,2.53,1.03,0,">1 nonsynonymous","F44L D90L",2
"lib1","SARS-CoV-2","ACGAAAACCTGGGACT",1,59.27,9.94,-0.82,0.08,2.99,1,0,">1 nonsynonymous","C61K T85V Y175H",3
"lib1","SARS-CoV-2","ACGAAAACTGTTTCCA",2,54.84,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G86P Y121M G146N Y178E",4
"lib1","SARS-CoV-2","ACGAAAAGAAGCATAG",2,67.75,10.65,-0.11,0.03,2.95,1,0,">1 nonsynonymous","A33M C195S",2
"lib1","SARS-CoV-2","ACGAAAAGTATATAAC",5,94.38,8.75,-2.02,0.06,2.76,1.11,0,">1 nonsynonymous","S29N A42H F156N P177A",4
"lib1","SARS-CoV-2","ACGAAAATACATGATT",2,95.31,10.72,-0.05,0.07,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGAAAATAGAATGGC",2,11.49,9.8,-0.97,0.18,2.35,1.14,0.01,">1 nonsynonymous","L5E A42M D75M A89V",4
"lib1","SARS-CoV-2","ACGAAAATATCCACGG",2,54.45,10.76,0,0.08,2.93,1.04,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","ACGAAAATGCCGTGAT",3,48.01,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F17H F99E",2
"lib1","SARS-CoV-2","ACGAAAATTAAACCTG",4,18.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89F N107S",2
"lib1","SARS-CoV-2","ACGAAAATTCGATAAA",1,7.77,8.86,-1.91,0.16,2.91,1.04,0,">1 nonsynonymous","D90N G117Y",2
"lib1","SARS-CoV-2","ACGAAAATTTACAGCA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","W23Q V52* G166P S184E",4
"lib1","SARS-CoV-2","ACGAAACAATAATCCT",2,26,7.86,-2.9,0.29,1.5,1.18,0.03,">1 nonsynonymous","A33Q P96V",2
"lib1","SARS-CoV-2","ACGAAACAATGCAAAT",4,66.55,10.75,-0.01,0.07,2.94,1.03,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","ACGAAACACCCATCCT",5,35.68,9.5,-1.26,0.21,1.84,1.16,0.02,">1 nonsynonymous","S19M E141R",2
"lib1","SARS-CoV-2","ACGAAACACCTAATAC",2,10.57,6,-4.76,1.92,1.5,1.13,0.02,"1 nonsynonymous","C102P",1
"lib1","SARS-CoV-2","ACGAAACACGCAATAG",4,50.06,10.79,0.03,0.07,2.92,1.03,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","ACGAAACAGGCACAAT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","D97* L122A F167V",3
"lib1","SARS-CoV-2","ACGAAACGCTGCGGCT",5,73.72,8.55,-2.21,0.19,1.5,1.11,0.01,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","ACGAAACTAATCAACA",3,34.45,9.16,-1.6,0.11,2.61,1.17,0,"1 nonsynonymous","G146M",1
"lib1","SARS-CoV-2","ACGAAACTCCACGAGG",7,23.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2T S19L D68L W106R",4
"lib1","SARS-CoV-2","ACGAAACTTCGAAGTC",7,8.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D75Q K87R L183S",3
"lib1","SARS-CoV-2","ACGAAACTTTGAATCC",3,12.85,7.11,-3.66,0.18,1.72,1.11,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ACGAAAGAACAGAATT",3,40.51,6.21,-4.56,0.83,1.99,1.26,0.03,">1 nonsynonymous","V11A G146H C150T",3
"lib1","SARS-CoV-2","ACGAAAGAAGAAATAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","Q79* K132N V153S",3
"lib1","SARS-CoV-2","ACGAAAGACAAGGATC",2,6.68,11.09,0.33,0.14,2.87,1.03,0.01,">1 nonsynonymous","E10D V65L",2
"lib1","SARS-CoV-2","ACGAAAGATATAAGAA",2,29.39,10.7,-0.07,0.05,2.94,1.04,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","ACGAAAGATGAAAGCA",12,48.7,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N58A A81K V103R",3
"lib1","SARS-CoV-2","ACGAAAGCCCGGACAC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","I80* Y93L F126N",3
"lib1","SARS-CoV-2","ACGAAAGGATCCCATT",3,43.73,9.75,-1.02,0.1,1.9,1.06,0,">1 nonsynonymous","A18V D34T C61R",3
"lib1","SARS-CoV-2","ACGAAAGGTGTTAAAG",5,60.89,10.28,-0.48,0.13,2.51,1.03,0.01,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","ACGAAAGTAAACGAAC",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P Y66P",2
"lib1","SARS-CoV-2","ACGAAATAAAAGGTGT",4,69.94,10.81,0.04,0.05,2.96,1,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","ACGAAATAACGAAATA",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L R78P G86Q",3
"lib1","SARS-CoV-2","ACGAAATAGGCAAATA",6,118.73,8.57,-2.19,0.18,1.88,1.19,0.01,">1 nonsynonymous","N58A D90C I138M E154F P197C",5
"lib1","SARS-CoV-2","ACGAAATATCGAAGGG",3,42.28,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","L57C E76K F99K S113N",4
"lib1","SARS-CoV-2","ACGAAATCAACCACCC",9,53.75,6,-4.76,2,1.5,1.19,0.03,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","ACGAAATCCCAAGAGG",4,67.95,10.42,-0.34,0.05,2.88,1.04,0,">1 nonsynonymous","D59G L122V E186P T201Q",4
"lib1","SARS-CoV-2","ACGAAATCCGATCTTC",1,5.09,10.7,-0.06,0.19,2.9,1.02,0.02,"1 nonsynonymous","F47Y",1
"lib1","SARS-CoV-2","ACGAAATCCGGCGAAC",10,101,8.42,-2.34,0.21,1.86,1.13,0.02,">1 nonsynonymous","P7L S53L Y119I R136K",4
"lib1","SARS-CoV-2","ACGAAATCTCTATCCC",5,61.28,9.49,-1.27,0.09,2.68,1.09,0,">1 nonsynonymous","A18C P169V",2
"lib1","SARS-CoV-2","ACGAAATGACATAATC",3,43.99,7.65,-3.11,0.27,1.5,1.2,0.03,">1 nonsynonymous","V37L N64R P82T K87H F156G T201M",6
"lib1","SARS-CoV-2","ACGAAATGACGTACGG",5,33.17,10.57,-0.19,0.06,2.93,1.02,0,">1 nonsynonymous","L60T T140R",2
"lib1","SARS-CoV-2","ACGAAATGTTCCGAAT",3,4.16,NA,NA,NA,NA,NA,NA,"stop","C49* I142G",2
"lib1","SARS-CoV-2","ACGAAATTCAAAGAAC",10,36.87,8.71,-2.06,0.27,1.5,1.16,0.02,">1 nonsynonymous","I2T A33M D90H G146C",4
"lib1","SARS-CoV-2","ACGAAATTTAAGGGAC",5,0.81,NA,NA,NA,NA,NA,NA,"stop","Y39* P149I",2
"lib1","SARS-CoV-2","ACGAAATTTATGTATG",2,5.06,NA,NA,NA,NA,NA,NA,"stop","A105S D112W Y123* G155V",4
"lib1","SARS-CoV-2","ACGAAATTTGCTAGAA",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M G9W G86R W106T F160K",5
"lib1","SARS-CoV-2","ACGAACAATTAATACT",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69V I80G Y91A K128G",4
"lib1","SARS-CoV-2","ACGAACACAGCTAAAT",2,19.99,7.86,-2.91,0.25,2.08,1.16,0.02,">1 nonsynonymous","F62S K114S L122W F160I T170D",5
"lib1","SARS-CoV-2","ACGAACATATACCAAA",5,64.41,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6I T15D L57V A81T R179L",5
"lib1","SARS-CoV-2","ACGAACATATCGTATG",6,89.9,10.7,-0.07,0.04,2.92,1.04,0,">1 nonsynonymous","T3R N120M T201L",3
"lib1","SARS-CoV-2","ACGAACCAGAATAACA",10,16.13,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I104R E135L A145I",3
"lib1","SARS-CoV-2","ACGAACCATCACACCT",2,22.22,8.22,-2.55,0.17,1.72,1.11,0.01,">1 nonsynonymous","K94N Y121I G174M",3
"lib1","SARS-CoV-2","ACGAACCATTACAAGT",2,5.83,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N107Y V115R I142L Y165I",4
"lib1","SARS-CoV-2","ACGAACCATTGCGGCC",3,1.17,NA,NA,NA,NA,NA,NA,"stop","R25P A42S Q84L N107* G155S",5
"lib1","SARS-CoV-2","ACGAACCCAATCAGAG",6,79.49,8.34,-2.42,0.07,2.75,1.08,0,"1 nonsynonymous","S113I",1
"lib1","SARS-CoV-2","ACGAACCCACTCCACA",2,34.49,10.72,-0.05,0.04,2.93,1.03,0,">1 nonsynonymous","K114M S129R T140L",3
"lib1","SARS-CoV-2","ACGAACCCATGATGAA",3,42.96,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L5P I28R P96T N151Y",4
"lib1","SARS-CoV-2","ACGAACCCATTGCACA",5,16.05,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","F47V G101M",2
"lib1","SARS-CoV-2","ACGAACCCGTTAAAAT",2,26.08,8.54,-2.22,0.15,2.78,1,0.01,">1 nonsynonymous","P7A K56L G117K S129D",4
"lib1","SARS-CoV-2","ACGAACCCGTTGAAAT",6,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K D68N N107T",3
"lib1","SARS-CoV-2","ACGAACCGCCTACCCA",13,78.49,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C49R C158L K198R",3
"lib1","SARS-CoV-2","ACGAACCGTGAAAAGG",2,0.95,NA,NA,NA,NA,NA,NA,"stop","K94Y E154* N157H",3
"lib1","SARS-CoV-2","ACGAACCGTGGAAATT",2,19.69,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","T46F Y93K L162M",3
"lib1","SARS-CoV-2","ACGAACCTATACCCAA",2,35.47,9.36,-1.4,0.22,1.5,1.16,0.02,">1 nonsynonymous","A89R I104L",2
"lib1","SARS-CoV-2","ACGAACCTTTTAGCTT",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M P82L",2
"lib1","SARS-CoV-2","ACGAACGAAATAGTTT",2,43.45,10.87,0.11,0.08,2.81,1.13,0,"1 nonsynonymous","S53I",1
"lib1","SARS-CoV-2","ACGAACGAACCTGTAT",4,28.62,9.87,-0.89,0.1,2.57,1.06,0,">1 nonsynonymous","S36G L60M Y121S",3
"lib1","SARS-CoV-2","ACGAACGAACTACGTA",6,89.41,8.85,-1.92,0.09,2.3,1.15,0,">1 nonsynonymous","D59P R73Q",2
"lib1","SARS-CoV-2","ACGAACGACCTACTTG",7,145.56,9.1,-1.67,0.18,1.5,1.1,0.02,">1 nonsynonymous","W106N K199L",2
"lib1","SARS-CoV-2","ACGAACGAGTGGCCCT",2,72.43,10.66,-0.1,0.04,2.93,1.03,0,">1 nonsynonymous","L5G P149L",2
"lib1","SARS-CoV-2","ACGAACGTAAGCACAT",9,101.08,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S41P Y91K F167K",3
"lib1","SARS-CoV-2","ACGAACGTACTACTTG",2,7.72,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","F70E G83A A89C Q168A",4
"lib1","SARS-CoV-2","ACGAACTAAAAACAAG",3,42.65,6.09,-4.67,1.37,1.5,1.27,0.04,">1 nonsynonymous","L131W C150A",2
"lib1","SARS-CoV-2","ACGAACTAAAACGAAT",9,68.32,6,-4.76,1.34,1.5,1.21,0.01,">1 nonsynonymous","P96S N107I",2
"lib1","SARS-CoV-2","ACGAACTAGCGGTCAA",2,8.79,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44D A81G R127S S184C P197G",5
"lib1","SARS-CoV-2","ACGAACTAGGATCCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2G I80* V173T",3
"lib1","SARS-CoV-2","ACGAACTATAATTTGG",2,25.74,6,-4.76,1.54,1.5,1.17,0.02,">1 nonsynonymous","T3N A14V R25G S129N",4
"lib1","SARS-CoV-2","ACGAACTATAGCTGTA",2,10.16,9.42,-1.35,0.11,2.76,1.14,0.01,"1 nonsynonymous","A145F",1
"lib1","SARS-CoV-2","ACGAACTCTAAGTAGC",6,52.28,10.53,-0.23,0.06,2.95,1.01,0,">1 nonsynonymous","I138A P149L",2
"lib1","SARS-CoV-2","ACGAACTCTTACACTG",2,16.33,10.92,0.16,0.13,2.83,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGAACTGAAATGATT",8,78.32,10.82,0.06,0.08,2.9,1.04,0,">1 nonsynonymous","L5P T55I",2
"lib1","SARS-CoV-2","ACGAACTGTAAGTCTT",4,67.04,10.49,-0.27,0.13,2.91,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGAACTTCTAACTAC",2,119.42,8.36,-2.4,0.26,1.56,1.17,0.02,">1 nonsynonymous","F99I Y159W",2
"lib1","SARS-CoV-2","ACGAACTTCTCTGACT",1,9.19,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","Y93E",1
"lib1","SARS-CoV-2","ACGAACTTGCTGATCA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","V52P A105V Y119C G146N G166* S200I",6
"lib1","SARS-CoV-2","ACGAACTTGGCTAAGA",4,21.44,10.88,0.12,0.09,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAAGAAGATCATGA",2,25.29,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","R16Q L60T V77S D97L",4
"lib1","SARS-CoV-2","ACGAAGAATATCATAC",2,0.57,NA,NA,NA,NA,NA,NA,"stop","F62S Y91P N130* G172M",4
"lib1","SARS-CoV-2","ACGAAGACGTAACAAT",8,87.99,10.77,0.01,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAAGAGTAAACACA",2,23.81,10.85,0.09,0.11,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAAGAGTACGTTAA",1,79.37,10.74,-0.03,0.08,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAAGATAATATATG",1,8.95,6.01,-4.75,1.87,1.5,1.15,0.05,">1 nonsynonymous","N1D V115L E135I P161S",4
"lib1","SARS-CoV-2","ACGAAGATGATGAACC",5,107.4,10.71,-0.05,0.06,2.88,1.06,0,"1 nonsynonymous","F160C",1
"lib1","SARS-CoV-2","ACGAAGATGTACGGGT",4,60.33,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I72P F99L",2
"lib1","SARS-CoV-2","ACGAAGATTTACCTGC",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F D68M K87V",3
"lib1","SARS-CoV-2","ACGAAGCAAGAAGAAA",2,13.59,9.81,-0.96,0.15,2.24,1.07,0.01,">1 nonsynonymous","D34F S53C",2
"lib1","SARS-CoV-2","ACGAAGCAAGCACACA",1,13.46,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A81Y D97K K132Y Q144K V180T",5
"lib1","SARS-CoV-2","ACGAAGCCAAAGCCAG",2,24.57,8.4,-2.36,0.14,2.24,1.12,0.01,">1 nonsynonymous","C61T S113A G146M",3
"lib1","SARS-CoV-2","ACGAAGCCCATATGTT",2,12.71,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T55F Y119G Y165K V181A T201Y",5
"lib1","SARS-CoV-2","ACGAAGCCCCTTATCC",3,67.27,6.82,-3.94,0.25,1.5,1.09,0.01,">1 nonsynonymous","W106M Y165I",2
"lib1","SARS-CoV-2","ACGAAGCGATTATATA",2,13.78,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C49Y V77A P197S",3
"lib1","SARS-CoV-2","ACGAAGCTCCTGTGAT",2,31.77,6,-4.76,1.67,1.5,1.21,0.01,">1 nonsynonymous","S43P F44N W106L K114V T148Y F167L",6
"lib1","SARS-CoV-2","ACGAAGGACTGTAGAG",7,78,6.11,-4.65,0.82,1.5,1.19,0.02,">1 nonsynonymous","S41L T55M R127N V182K",4
"lib1","SARS-CoV-2","ACGAAGGACTGTCTAA",1,14.02,8.36,-2.41,0.32,1.5,1.05,0.07,">1 nonsynonymous","N1R K94L N130Q G174E",4
"lib1","SARS-CoV-2","ACGAAGGATGATGCAA",4,36.01,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","S113F D137S",2
"lib1","SARS-CoV-2","ACGAAGGCAAAGTACA",4,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V L38V S69I G152R",4
"lib1","SARS-CoV-2","ACGAAGGCAGATTTTT",7,261.2,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N4Y A14S A18Y Y35N Q144W A192Y",6
"lib1","SARS-CoV-2","ACGAAGGCGAGCTTCT",2,20.34,6.18,-4.59,0.44,1.5,1.13,0.01,">1 nonsynonymous","K48R F99S Y143M F160T",4
"lib1","SARS-CoV-2","ACGAAGGGCCATTTAT",2,0.56,NA,NA,NA,NA,NA,NA,"stop","V52T T55H I138* Q168E",4
"lib1","SARS-CoV-2","ACGAAGTACATAGTTC",1,78.5,10.2,-0.56,0.08,2.53,1.02,0,">1 nonsynonymous","N24F S41T",2
"lib1","SARS-CoV-2","ACGAAGTATTTCCCCA",5,157.61,10.75,-0.01,0.05,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAAGTCAGCACCTT",8,107.78,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R16I L95Q I142F",3
"lib1","SARS-CoV-2","ACGAAGTGATCTCCCC",6,171.81,10.63,-0.14,0.05,2.89,1.04,0,">1 nonsynonymous","F62S I138D",2
"lib1","SARS-CoV-2","ACGAAGTGATTACTAA",11,45.29,10.86,0.1,0.12,2.68,1.1,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","ACGAAGTTAGGTTAGG",4,33.08,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","D97H G172M",2
"lib1","SARS-CoV-2","ACGAATAAACAGAATT",3,34.57,9.94,-0.82,0.15,2.22,1,0.01,">1 nonsynonymous","T3W E10G V65F L122E V153I A192H",6
"lib1","SARS-CoV-2","ACGAATAAACGACCCA",2,20.97,9.22,-1.54,0.08,2.73,1.04,0,">1 nonsynonymous","I2Y N58Q G117P V173L",4
"lib1","SARS-CoV-2","ACGAATAAAGACCTAG",6,82.32,10.41,-0.36,0.06,2.87,1.05,0,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","ACGAATAACACGAACC",2,26.48,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","V71Y S200Y",2
"lib1","SARS-CoV-2","ACGAATAAGACAACAG",3,19.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14F V103A R127C G166S Y178S",5
"lib1","SARS-CoV-2","ACGAATAAGCTTTCCT",5,31.15,7.54,-3.22,0.39,1.5,1.03,0.05,">1 nonsynonymous","A14F I28Q S41E K56R",4
"lib1","SARS-CoV-2","ACGAATAATACCAAAG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136W F185M",2
"lib1","SARS-CoV-2","ACGAATAATATATCCA",6,85.4,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y50T T63F Y93A F160V T201M",5
"lib1","SARS-CoV-2","ACGAATAATCCAATCT",1,11.13,9.85,-0.91,0.2,1.99,1.07,0.02,">1 nonsynonymous","S43I A89F",2
"lib1","SARS-CoV-2","ACGAATACAGCCATAT",2,13.55,10.59,-0.18,0.11,2.97,1,0.01,">1 nonsynonymous","K56H K128F A192K",3
"lib1","SARS-CoV-2","ACGAATACATAATAAT",5,82.28,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8I V71L A89M K94S L125I",5
"lib1","SARS-CoV-2","ACGAATACATCAAATT",4,26.72,6.52,-4.25,0.28,1.5,1.14,0.01,"1 nonsynonymous","V181D",1
"lib1","SARS-CoV-2","ACGAATACCTTTTAAA",4,20.59,10.31,-0.45,0.05,2.88,1.01,0,">1 nonsynonymous","N1G N40L",2
"lib1","SARS-CoV-2","ACGAATACGCGAAACC",3,37.9,8.46,-2.3,0.21,2.26,1.09,0.02,">1 nonsynonymous","L60M G116L N157L",3
"lib1","SARS-CoV-2","ACGAATATAACAACCT",9,3.15,NA,NA,NA,NA,NA,NA,"stop","I2M G86* N107H",3
"lib1","SARS-CoV-2","ACGAATATTCACCTGA",10,59.97,6,-4.76,1.43,1.5,1.24,0.01,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","ACGAATCCAGAACGAA",3,89.62,10.12,-0.65,0.06,2.75,1.03,0,">1 nonsynonymous","D90L P169R",2
"lib1","SARS-CoV-2","ACGAATCCCACTGAAT",7,80.44,10.73,-0.04,0.06,2.91,1.07,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","ACGAATCCGTGAGACC",4,21.49,10.34,-0.43,0.08,2.87,1,0,">1 nonsynonymous","R16I D90Y",2
"lib1","SARS-CoV-2","ACGAATCCTGAATACT",5,31.93,10.18,-0.59,0.07,2.72,1.02,0,">1 nonsynonymous","L111P N130M",2
"lib1","SARS-CoV-2","ACGAATCTAATTCCAT",2,19.16,10.73,-0.04,0.14,2.82,1.03,0.01,">1 nonsynonymous","K26T V37C",2
"lib1","SARS-CoV-2","ACGAATCTACAATTAG",1,98.05,7.71,-3.06,0.18,1.65,1.17,0.01,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ACGAATCTATCCTACG",8,68.61,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F8R V20M Y39Q K87V",4
"lib1","SARS-CoV-2","ACGAATCTGCACTGGT",3,52.79,8.77,-2,0.11,2.27,1.21,0.01,">1 nonsynonymous","T55H W106R Y119S Q168A",4
"lib1","SARS-CoV-2","ACGAATGACCAACATG",2,4.54,NA,NA,NA,NA,NA,NA,"stop","R25F F62* F99S L122V",4
"lib1","SARS-CoV-2","ACGAATGATGTCCCGG",4,59.15,9.86,-0.9,0.12,2.25,1.11,0.01,">1 nonsynonymous","V77I Q84C E186G",3
"lib1","SARS-CoV-2","ACGAATGGCAACGATA",1,15.02,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S19L P82I",2
"lib1","SARS-CoV-2","ACGAATGGTAAGTGCT",2,13.08,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","W23K L38P C49Y P96F",4
"lib1","SARS-CoV-2","ACGAATGGTCACTTAG",2,150.17,9.21,-1.56,0.06,2.8,1.13,0,">1 nonsynonymous","D90S P169E",2
"lib1","SARS-CoV-2","ACGAATGGTGAAAATG",1,6.25,8.06,-2.7,0.45,1.5,1.26,0.03,">1 nonsynonymous","L5W V11N G83M",3
"lib1","SARS-CoV-2","ACGAATGTTGGTTTCA",1,15.5,8.7,-2.07,0.22,2.42,1.06,0.04,">1 nonsynonymous","D34S Y159V",2
"lib1","SARS-CoV-2","ACGAATTAAATAGCAA",6,0.68,NA,NA,NA,NA,NA,NA,"stop","E10* S147Y",2
"lib1","SARS-CoV-2","ACGAATTAACATCACT",5,0.54,NA,NA,NA,NA,NA,NA,"stop","S129W A190*",2
"lib1","SARS-CoV-2","ACGAATTAATAAACTG",8,27899.04,8.38,-2.39,0.15,1.99,1.07,0.01,">1 nonsynonymous","W106K Y119P",2
"lib1","SARS-CoV-2","ACGAATTAGTCCCACA",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L E141C S147N",3
"lib1","SARS-CoV-2","ACGAATTATTACATAC",2,31.02,9.82,-0.94,0.15,1.99,1.21,0.01,">1 nonsynonymous","V115K L162T",2
"lib1","SARS-CoV-2","ACGAATTCATTCGAGA",3,37.94,10.75,-0.02,0.07,2.92,1.02,0,"1 nonsynonymous","T55M",1
"lib1","SARS-CoV-2","ACGAATTGCCTTGCGG",8,92.41,9.11,-1.65,0.16,1.5,1.11,0.01,">1 nonsynonymous","A14E S69E T201Q",3
"lib1","SARS-CoV-2","ACGAATTGCTCCACAT",6,101.63,10.71,-0.05,0.05,2.92,1.01,0,">1 nonsynonymous","S43T N120V",2
"lib1","SARS-CoV-2","ACGAATTGTCAACACA",1,16.65,10.77,0,0.1,2.86,1.05,0.01,">1 nonsynonymous","G9K N64S P96S Q163V",4
"lib1","SARS-CoV-2","ACGAATTTACTAGTAG",2,12.09,10.6,-0.17,0.04,2.99,1.01,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","ACGAATTTAGTATTGC",10,1.06,NA,NA,NA,NA,NA,NA,"stop","N13* K26S A89N",3
"lib1","SARS-CoV-2","ACGACAAAATCGACTT",1,14.81,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14C L95K S147H",3
"lib1","SARS-CoV-2","ACGACAAAATCTCCTA",3,18.84,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48T V77R G86Y",3
"lib1","SARS-CoV-2","ACGACAAACAAACTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* N58P D97Q",3
"lib1","SARS-CoV-2","ACGACAACATCTTCAG",1,15.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23I Y50R K132L Q176G",4
"lib1","SARS-CoV-2","ACGACAAGAATCTGAG",1,0.27,NA,NA,NA,NA,NA,NA,"stop","T46A E186*",2
"lib1","SARS-CoV-2","ACGACAAGTGAATCAA",1,41.14,8.92,-1.84,0.16,2.13,1.13,0.01,">1 nonsynonymous","F62T N109Y E141L",3
"lib1","SARS-CoV-2","ACGACAATAATTAAGC",1,21.23,10.78,0.01,0.11,2.84,1.09,0,">1 nonsynonymous","I2N C61R L95V",3
"lib1","SARS-CoV-2","ACGACAATTTTTAGCA",5,17.43,9.89,-0.87,0.16,2.11,1.01,0.01,">1 nonsynonymous","E10K A33M S43L A105I L125I",5
"lib1","SARS-CoV-2","ACGACACAACAGAACG",2,11.05,9.02,-1.75,0.15,2.71,1.28,0.01,"1 nonsynonymous","G117T",1
"lib1","SARS-CoV-2","ACGACACACCGCTAAG",2,15.3,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","N13F F44P V65R A89W",4
"lib1","SARS-CoV-2","ACGACACATCCGACCC",2,43.22,9.98,-0.78,0.1,2.1,1.04,0,">1 nonsynonymous","F62M L131T",2
"lib1","SARS-CoV-2","ACGACACCAAAAGCCA",3,20.49,9.94,-0.82,0.14,2.46,1.05,0.01,">1 nonsynonymous","I2P K56I G83N D98C",4
"lib1","SARS-CoV-2","ACGACACCATCATAAT",3,117.74,9.82,-0.95,0.08,2.61,1.05,0,">1 nonsynonymous","G155L L183I",2
"lib1","SARS-CoV-2","ACGACACCATCTACCC",1,0.78,NA,NA,NA,NA,NA,NA,"stop","F99* W106R K114F T201W",4
"lib1","SARS-CoV-2","ACGACACCCAAGCTTT",6,75.3,10.03,-0.73,0.11,2.36,1.05,0,">1 nonsynonymous","Y91R I104L",2
"lib1","SARS-CoV-2","ACGACACGGGACAATC",1,45.83,6.33,-4.43,0.22,2.18,1.16,0,">1 nonsynonymous","F126S P133K",2
"lib1","SARS-CoV-2","ACGACACTCCTAAGTC",7,59.33,9.53,-1.23,0.07,2.82,1.12,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","ACGACACTGATAAAAG",4,100.26,10.63,-0.14,0.05,2.91,1.04,0,">1 nonsynonymous","S45H C61S",2
"lib1","SARS-CoV-2","ACGACACTGCAAAGCC",2,27.13,10.42,-0.34,0.08,2.82,1.06,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","ACGACAGAACTTATTG",1,78.57,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","Y66E E154M P169F Q176E",4
"lib1","SARS-CoV-2","ACGACAGAGTAATAAA",1,5.83,NA,NA,NA,NA,NA,NA,"stop","I2S C6P I88L G146*",4
"lib1","SARS-CoV-2","ACGACAGATCGATATT",4,85.56,10.8,0.04,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACAGATTCAAAGG",1,2.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","ACGACAGCAGCGTAAA",7,50.58,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","W23A G86R W106N C150A T170F",5
"lib1","SARS-CoV-2","ACGACAGCATATTGAA",1,102.08,10.45,-0.31,0.05,2.91,1.02,0,"1 nonsynonymous","G174Q",1
"lib1","SARS-CoV-2","ACGACAGCCTTAATTA",1,25.49,10.39,-0.38,0.07,2.88,1.09,0,">1 nonsynonymous","L60G P149E",2
"lib1","SARS-CoV-2","ACGACAGGATAACAGT",4,57.37,10.83,0.07,0.08,2.9,1.02,0,"1 nonsynonymous","P191H",1
"lib1","SARS-CoV-2","ACGACAGGCGCATTTC",3,44.27,6,-4.76,1.65,1.5,1.17,0.02,">1 nonsynonymous","E10L D68E G101M L122E E154Q",5
"lib1","SARS-CoV-2","ACGACAGGGGCACAGT",9,63.37,6.01,-4.75,1.49,1.5,1.24,0.04,">1 nonsynonymous","C61L G83D V103K L131M Y143L Q163W",6
"lib1","SARS-CoV-2","ACGACATACTATAACT",2,17.39,10.71,-0.05,0.14,2.86,1.02,0.01,">1 nonsynonymous","L5D V182I",2
"lib1","SARS-CoV-2","ACGACATAGACTCGCA",8,21.07,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L95A",1
"lib1","SARS-CoV-2","ACGACATCCCAATTTT",2,24.05,9.51,-1.25,0.16,1.68,1.15,0.01,">1 nonsynonymous","G101L P197L T201M",3
"lib1","SARS-CoV-2","ACGACATCTCATACAG",1,29.04,9.33,-1.43,0.17,1.62,1.1,0.01,">1 nonsynonymous","A33L L60V R136G",3
"lib1","SARS-CoV-2","ACGACATTACACACCT",5,77.96,10.2,-0.57,0.05,2.77,1.01,0,">1 nonsynonymous","S129V S139L",2
"lib1","SARS-CoV-2","ACGACATTATATTGGC",3,43.08,10.92,0.15,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACCAAAGTAAATA",1,3.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","ACGACCAAATAGTATA",7,31.48,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","S113R P161S",2
"lib1","SARS-CoV-2","ACGACCAATAATGTCT",2,10.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K K87D D97L F126N T148H G155Y Y165M",7
"lib1","SARS-CoV-2","ACGACCACACATAAAG",1,30.03,8.98,-1.78,0.12,2.46,1.18,0.01,">1 nonsynonymous","A42L L60A I142S N151H",4
"lib1","SARS-CoV-2","ACGACCACCACTCGAG",1,14.01,10.75,-0.02,0.1,2.89,1.02,0,">1 nonsynonymous","A14N S36R",2
"lib1","SARS-CoV-2","ACGACCACCCAAACTT",3,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R S113V G146K N171M C195G",5
"lib1","SARS-CoV-2","ACGACCACCCACTTTT",1,2.81,NA,NA,NA,NA,NA,NA,"stop","Y35N V52L T63L T85S D90* W106R A190T",7
"lib1","SARS-CoV-2","ACGACCACCTCAAATA",6,46.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T63W V77D G86S W106Q E141L F156L",6
"lib1","SARS-CoV-2","ACGACCACGGACGGGC",6,82.27,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D68F S139V P177Y",3
"lib1","SARS-CoV-2","ACGACCAGCACTAAAA",7,1.97,NA,NA,NA,NA,NA,NA,"stop","P7* R27K G86C F185V A190N",5
"lib1","SARS-CoV-2","ACGACCAGTCGTCTTA",4,65.33,6.18,-4.59,0.79,1.5,1.17,0.01,">1 nonsynonymous","T100H S108Y R127H R136T",4
"lib1","SARS-CoV-2","ACGACCAGTGGTAACA",6,82.74,7.1,-3.67,0.23,1.5,1.15,0.01,">1 nonsynonymous","G74V F156H Q163T",3
"lib1","SARS-CoV-2","ACGACCATAACTAAAT",3,96.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L131D E141M",2
"lib1","SARS-CoV-2","ACGACCATGCTGACTC",1,1.13,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib1","SARS-CoV-2","ACGACCCCCGACGTGC",6,0.49,NA,NA,NA,NA,NA,NA,"stop","C61K D97G S113E E154*",4
"lib1","SARS-CoV-2","ACGACCCTGGAGTACA",6,58.04,8.23,-2.53,0.1,1.81,1.23,0,">1 nonsynonymous","C49F G117S N130R N151K",4
"lib1","SARS-CoV-2","ACGACCGGTGTACTTG",1,11.39,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","G86S P96Y",2
"lib1","SARS-CoV-2","ACGACCTATTGCCTAG",3,49.04,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","D97A G152D G172M",3
"lib1","SARS-CoV-2","ACGACGAAAGTAGATA",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31A E135G G146D",3
"lib1","SARS-CoV-2","ACGACGAAGATCAAAG",9,27.78,7.69,-3.08,0.32,1.5,1,0.04,">1 nonsynonymous","K56I P133R E141T F160S N171H",5
"lib1","SARS-CoV-2","ACGACGAAGATTTACC",2,23.21,10.92,0.16,0.09,2.95,1.02,0,">1 nonsynonymous","F134G N151K",2
"lib1","SARS-CoV-2","ACGACGAATGAGATAA",7,16.9,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N1Q T55D I88S R124G",4
"lib1","SARS-CoV-2","ACGACGAATGCACCAG",3,57.79,10.84,0.07,0.08,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACGAATTCACCTT",7,46.87,8.36,-2.41,0.45,1.5,1,0.07,">1 nonsynonymous","K56R F99C",2
"lib1","SARS-CoV-2","ACGACGACACAACAAC",2,17.69,6.96,-3.8,0.24,1.5,1.03,0.02,">1 nonsynonymous","A42R F99L N107V Y143W G174S",5
"lib1","SARS-CoV-2","ACGACGATCCTAACAT",6,135.51,10.71,-0.05,0.04,2.9,1.05,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","ACGACGATTCTCTTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","R27L G86* Y119G",3
"lib1","SARS-CoV-2","ACGACGCAAAGCAGCT",4,77.25,10.73,-0.03,0.06,2.96,1.01,0,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","ACGACGCAGAAAATTG",5,3.51,NA,NA,NA,NA,NA,NA,"stop","V103L R136L C195*",3
"lib1","SARS-CoV-2","ACGACGCGCATACTGC",3,27.24,9.21,-1.56,0.32,1.5,1,0.06,">1 nonsynonymous","I28V Y35S W106L",3
"lib1","SARS-CoV-2","ACGACGCTAAGGGTTT",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107L P149T P177S",3
"lib1","SARS-CoV-2","ACGACGGACGTCGAAT",1,46.01,10.75,-0.01,0.08,2.82,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACGGTCCTTAAGT",1,20.11,10.69,-0.08,0.05,2.92,1.05,0,">1 nonsynonymous","N4M V37K K128N",3
"lib1","SARS-CoV-2","ACGACGTCACAGCTAA",3,29.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K94T V103P K128L T140A",4
"lib1","SARS-CoV-2","ACGACTAATACCAACA",2,47.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Q79G R136A A190L",3
"lib1","SARS-CoV-2","ACGACTAATGTCTACG",4,16.59,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","N13C V103C P197S",3
"lib1","SARS-CoV-2","ACGACTACCAAACAAG",3,14.82,7.07,-3.69,0.38,1.5,1.02,0.05,">1 nonsynonymous","K56G F99H N130W",3
"lib1","SARS-CoV-2","ACGACTACGCAATACA",1,45.42,6.7,-4.07,0.42,1.5,1.12,0.03,">1 nonsynonymous","L57F F167L",2
"lib1","SARS-CoV-2","ACGACTAGAGGGAAAT",7,70.22,10.77,0.01,0.07,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACTAGGCATCAGT",7,130.78,9.76,-1,0.07,2.59,1.05,0,">1 nonsynonymous","C6I A14S S43N",3
"lib1","SARS-CoV-2","ACGACTAGTTTTGACT",1,0.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127W",1
"lib1","SARS-CoV-2","ACGACTATACTATTGG",6,36.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V C61D V71E F99M E141M C158V",6
"lib1","SARS-CoV-2","ACGACTATAGAGTACT",4,5.7,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","ACGACTCAACTTCAAT",1,7.7,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R16N S41F P54A I72S A81T I138P E154V G172E S200G",9
"lib1","SARS-CoV-2","ACGACTCTAACGTTGT",2,18.04,9.48,-1.28,0.13,2.84,1.06,0.01,">1 nonsynonymous","A14I F62K",2
"lib1","SARS-CoV-2","ACGACTCTAAGGTCAT",5,213.54,6,-4.76,2,1.5,1.19,0,">1 nonsynonymous","Y35V I142E N171K P197I",4
"lib1","SARS-CoV-2","ACGACTCTAGCCTCCT",2,89.76,10.24,-0.52,0.05,2.8,1,0,">1 nonsynonymous","P7T N110F G155K",3
"lib1","SARS-CoV-2","ACGACTGACGAAGGGT",2,42.52,10.11,-0.65,0.06,2.88,1.02,0,">1 nonsynonymous","K132D Y178T",2
"lib1","SARS-CoV-2","ACGACTGCACAACGCA",2,47.35,10.81,0.04,0.07,2.86,1.07,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","ACGACTGCCTCAAACC",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S Q176L",2
"lib1","SARS-CoV-2","ACGACTGCGAACAGAT",2,11.31,10.47,-0.29,0.07,2.91,1.05,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","ACGACTGGAGAACCAA",4,25.3,8.48,-2.28,0.31,1.95,1.19,0.03,">1 nonsynonymous","Y66M P161N",2
"lib1","SARS-CoV-2","ACGACTGTGACCTATG",1,6.3,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V71G G101I P149D",3
"lib1","SARS-CoV-2","ACGACTTAAACAGTAT",3,12.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75R S113P Q144G",3
"lib1","SARS-CoV-2","ACGACTTAGGCAGCCG",2,34.64,10.92,0.15,0.08,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACTTATGTCATCA",2,50.04,10.78,0.01,0.08,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGACTTCAGCAATGG",1,23.51,6.87,-3.9,0.25,1.96,1.04,0.01,">1 nonsynonymous","C6S K132G Y178I",3
"lib1","SARS-CoV-2","ACGACTTTGGATTGAT",1,20.66,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F44A I72S P133S",3
"lib1","SARS-CoV-2","ACGAGAAAAATGATAT",5,1.67,NA,NA,NA,NA,NA,NA,"stop","K56* L95Q",2
"lib1","SARS-CoV-2","ACGAGAAAAGGCAGAG",7,2.61,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib1","SARS-CoV-2","ACGAGAAAGCAATATC",11,110.17,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7A N58V G86M L95T",4
"lib1","SARS-CoV-2","ACGAGAAATATGACTG",6,112.84,10.01,-0.75,0.06,2.19,1.04,0,">1 nonsynonymous","G51I T201K",2
"lib1","SARS-CoV-2","ACGAGAAATCACCTAT",1,7.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41C D112S",2
"lib1","SARS-CoV-2","ACGAGAACTAAGTTAT",2,38.76,9.37,-1.39,0.09,2.63,1.17,0,"1 nonsynonymous","D112E",1
"lib1","SARS-CoV-2","ACGAGAACTTATACTG",3,65,10.24,-0.52,0.03,2.93,1.02,0,">1 nonsynonymous","I2H C6S",2
"lib1","SARS-CoV-2","ACGAGAATACGTGCCA",2,15.6,6.37,-4.39,1.82,1.5,1.1,0.03,">1 nonsynonymous","L38R Y93T S113R E135W",4
"lib1","SARS-CoV-2","ACGAGAATAGATGACA",2,35.44,9.72,-1.05,0.28,1.72,1.09,0.03,">1 nonsynonymous","K48R D90G T100L Q144S G174S",5
"lib1","SARS-CoV-2","ACGAGAATCATTTTGA",7,39.75,10.71,-0.05,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAGAATTGAGTAAG",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E T55I I80K",3
"lib1","SARS-CoV-2","ACGAGACAACGAAATC",6,16.03,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","D90P G116P",2
"lib1","SARS-CoV-2","ACGAGACAACGTTTGT",2,33.58,8.03,-2.73,0.35,1.5,1.11,0.05,">1 nonsynonymous","L60K G146L",2
"lib1","SARS-CoV-2","ACGAGACAATACGATC",3,87.11,10.67,-0.09,0.04,2.94,1.02,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","ACGAGACCATTAATAT",3,1.73,NA,NA,NA,NA,NA,NA,"stop","G51* T170V S184L",3
"lib1","SARS-CoV-2","ACGAGACCGCACAGAC",10,98.05,10.62,-0.14,0.03,2.91,1.03,0,">1 nonsynonymous","V32K V115W",2
"lib1","SARS-CoV-2","ACGAGACGAGGGACGG",1,0.56,NA,NA,NA,NA,NA,NA,"stop","S19* P54L A105P",3
"lib1","SARS-CoV-2","ACGAGAGGAATCACCG",2,45.16,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41T K48L V71Y K94P T170Q T201R",6
"lib1","SARS-CoV-2","ACGAGAGGTGTAATAA",3,38.03,9.16,-1.6,0.09,2.76,1.12,0,"1 nonsynonymous","G166M",1
"lib1","SARS-CoV-2","ACGAGATACTACATCA",2,18.27,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","K26R K56F L60I I72D",4
"lib1","SARS-CoV-2","ACGAGATAGTCGTTCT",1,10.74,8.01,-2.75,0.33,1.5,1.07,0.05,">1 nonsynonymous","I80L K94L Y123L",3
"lib1","SARS-CoV-2","ACGAGATGGGAATACC",1,36.87,NA,NA,NA,NA,NA,NA,"stop","D90K T148* F167N",3
"lib1","SARS-CoV-2","ACGAGATGTTGTGATG",1,71.71,9.59,-1.18,0.07,2.7,1.04,0,">1 nonsynonymous","D90I G174D",2
"lib1","SARS-CoV-2","ACGAGATTCCAAGACT",5,34.92,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","ACGAGATTGTAACCCA",1,17.98,8.95,-1.82,0.1,2.83,1.16,0.01,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","ACGAGCACACTTGCGT",2,12.2,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","F44S P133A R179E",3
"lib1","SARS-CoV-2","ACGAGCCAACCATATG",4,2.61,NA,NA,NA,NA,NA,NA,"stop","T3R K56N I88C W106* L162M",5
"lib1","SARS-CoV-2","ACGAGCGAAAGACTTC",1,1.19,NA,NA,NA,NA,NA,NA,"stop","F47D I88T I104* S139F S147Y T201V",6
"lib1","SARS-CoV-2","ACGAGCGAAATTTCTA",2,11.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34H S108Q E141M",3
"lib1","SARS-CoV-2","ACGAGCGAGAGTTTTA",3,111.19,9.82,-0.94,0.1,2.45,1.07,0,">1 nonsynonymous","C31E D90S",2
"lib1","SARS-CoV-2","ACGAGCGAGTGCGTAA",2,32.34,10.78,0.01,0.11,2.67,1.03,0.01,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","ACGAGCGTAATAGAGG",2,5.04,7.02,-3.74,0.43,1.5,1.03,0.02,">1 nonsynonymous","I2H A81F P149F L162V",4
"lib1","SARS-CoV-2","ACGAGCTAGCGCCGCA",3,105.42,10.73,-0.03,0.06,2.86,1.05,0,">1 nonsynonymous","I2F R27V T201A",3
"lib1","SARS-CoV-2","ACGAGCTGATTGAACT",1,43.09,9.3,-1.46,0.06,2.94,1.07,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","ACGAGGAAATAGCACA",4,1.82,NA,NA,NA,NA,NA,NA,"stop","K87V D97* R136W",3
"lib1","SARS-CoV-2","ACGAGGAATATTTCAA",1,25.32,9.09,-1.67,0.16,1.92,1.16,0.01,">1 nonsynonymous","S45C N120H Q144V",3
"lib1","SARS-CoV-2","ACGAGGACAACCTGTG",11,226.5,10.66,-0.1,0.03,2.99,1,0,">1 nonsynonymous","Y35L K132R P149M",3
"lib1","SARS-CoV-2","ACGAGGAGAAAATGTT",2,26.8,9.96,-0.8,0.12,2.99,1.05,0.01,">1 nonsynonymous","E141L F156L",2
"lib1","SARS-CoV-2","ACGAGGATAAAAACTG",12,71.56,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S45P G86L S200T",3
"lib1","SARS-CoV-2","ACGAGGCAGTGCTGCG",3,70.21,10.19,-0.58,0.05,2.82,1,0,">1 nonsynonymous","A18S S139V",2
"lib1","SARS-CoV-2","ACGAGGCTAAGCTCAT",3,9.19,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","F12L A42I I88P Y119S",4
"lib1","SARS-CoV-2","ACGAGGCTATATTGTG",4,42.87,10.74,-0.02,0.04,2.98,1,0,"1 nonsynonymous","F47W",1
"lib1","SARS-CoV-2","ACGAGGGCATTGCCAA",4,47.17,10.73,-0.03,0.07,2.8,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGAGGGGCAATGCTA",3,35.89,10.75,-0.02,0.08,2.84,1.07,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","ACGAGGGGTGCTAACT",4,28.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T46Y T63S D90T D98P P161H",5
"lib1","SARS-CoV-2","ACGAGGTATGAAACAC",5,140.45,10.77,0,0.06,2.94,1.02,0,"1 nonsynonymous","A192E",1
"lib1","SARS-CoV-2","ACGAGGTCACTTAACG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","F44I L95* V103* L122M G174E P197L",6
"lib1","SARS-CoV-2","ACGAGTAAAATATATT",2,1.66,NA,NA,NA,NA,NA,NA,"stop","Y35N C49Y A105* G155D",4
"lib1","SARS-CoV-2","ACGAGTAACAGAAACC",10,134.74,10.19,-0.57,0.04,2.92,1.02,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","ACGAGTAAGTGAGAAT",1,14.32,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","W23C F44C T55L T63E",4
"lib1","SARS-CoV-2","ACGAGTAATCCAGCCC",3,14.41,6.82,-3.95,0.53,1.5,1.39,0.06,">1 nonsynonymous","W106D V173E",2
"lib1","SARS-CoV-2","ACGAGTACCAAATAGA",6,130.11,9.21,-1.55,0.08,2.67,1.13,0,">1 nonsynonymous","N64M R73A Q144S P149H H189G",5
"lib1","SARS-CoV-2","ACGAGTATAAATCAAA",7,37.68,9.89,-0.87,0.11,2.29,1.05,0,"1 nonsynonymous","N24W",1
"lib1","SARS-CoV-2","ACGAGTCAACCAGCGC",4,42.52,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","I72N",1
"lib1","SARS-CoV-2","ACGAGTCAAGACATCA",6,36.91,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A105D W106Y F167R",3
"lib1","SARS-CoV-2","ACGAGTCCACCAGATA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","N64V Y119D Q176*",3
"lib1","SARS-CoV-2","ACGAGTCGAGGTCTAA",4,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M C49N",2
"lib1","SARS-CoV-2","ACGAGTCGAGTGAGAA",2,7.19,8.15,-2.61,0.13,2.24,1,0,">1 nonsynonymous","Y123K N130G N157L",3
"lib1","SARS-CoV-2","ACGAGTCTAAACTCCG",2,15.22,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S69K Y91V S129M Y143L F156V",5
"lib1","SARS-CoV-2","ACGAGTCTATTTAAAT",5,53.85,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S43C C61W P161T R179M",4
"lib1","SARS-CoV-2","ACGAGTCTTTTTCCAA",9,155.21,10.28,-0.49,0.04,2.85,1.01,0,"1 nonsynonymous","P7I",1
"lib1","SARS-CoV-2","ACGAGTGACTGTAAGC",3,0.23,NA,NA,NA,NA,NA,NA,"stop","I2V L38* D68I T85R D90F R136S G146M T170N",8
"lib1","SARS-CoV-2","ACGAGTGAGATAAAAT",1,18.93,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S29P G172M K199I",3
"lib1","SARS-CoV-2","ACGAGTGATAGTACAC",6,0.26,NA,NA,NA,NA,NA,NA,"stop","C6S C61K L95P V180*",4
"lib1","SARS-CoV-2","ACGAGTGCTAGATGGT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","I80* T85S S113I S129T",4
"lib1","SARS-CoV-2","ACGAGTGGAGAATGAT",5,41.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6S A33G L162P",3
"lib1","SARS-CoV-2","ACGAGTTAATTAGTCG",2,58.05,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86I Y159K",2
"lib1","SARS-CoV-2","ACGAGTTAGGCCGCGT",6,594.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86T N157S",2
"lib1","SARS-CoV-2","ACGAGTTATTCATTAA",1,9.49,8.79,-1.97,0.17,2.89,1,0.01,">1 nonsynonymous","S36W T55S R73S G155R",4
"lib1","SARS-CoV-2","ACGAGTTTTTTAATAG",3,6.16,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","Q168M L183S",2
"lib1","SARS-CoV-2","ACGATAAAAATTCTAT",2,77.41,10.69,-0.07,0.06,2.92,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGATAAAATATGTAG",4,0.41,NA,NA,NA,NA,NA,NA,"stop","D98L G101V N118*",3
"lib1","SARS-CoV-2","ACGATAAACCAAACCT",7,171.44,9.43,-1.33,0.06,2.76,1.14,0,">1 nonsynonymous","K114E S129L T170A",3
"lib1","SARS-CoV-2","ACGATAAACGAGGCTA",1,8.6,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","F12M D59V N92L F156D",4
"lib1","SARS-CoV-2","ACGATAAAGTGATGAA",7,118.14,10.2,-0.56,0.06,2.81,1,0,">1 nonsynonymous","T15S I28V S129I",3
"lib1","SARS-CoV-2","ACGATAACCCTTACAT",4,18.96,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4P N40I L60T C158H",4
"lib1","SARS-CoV-2","ACGATAACTTGATGTA",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T A105F G155W",3
"lib1","SARS-CoV-2","ACGATAAGCAACACAC",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D L122V",2
"lib1","SARS-CoV-2","ACGATAAGCTAAGATC",2,57.48,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","S41T D68E L95K",3
"lib1","SARS-CoV-2","ACGATAAGTGCTAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12W A42K Y50* A67D P82L R127W",6
"lib1","SARS-CoV-2","ACGATAATAACAGCGG",2,25.3,10.77,0.01,0.06,2.97,1.03,0,">1 nonsynonymous","R27V S53Y",2
"lib1","SARS-CoV-2","ACGATAATAAGGCATT",8,84.21,6,-4.76,0.87,1.5,1.17,0.01,">1 nonsynonymous","Y35K C61S G86T N118E P149S",5
"lib1","SARS-CoV-2","ACGATAATAGTCTAGC",2,25.89,10.72,-0.05,0.07,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGATAATATAAGCAT",6,82.52,9.59,-1.17,0.1,2.27,1.11,0,">1 nonsynonymous","C6V G116L",2
"lib1","SARS-CoV-2","ACGATAATCTGTGCCT",10,127.93,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14S F62A Q79H G155C L162N",5
"lib1","SARS-CoV-2","ACGATAATGGTATATG",11,81.09,6,-4.76,1.66,1.5,1.26,0.03,">1 nonsynonymous","A105E E141D T201H",3
"lib1","SARS-CoV-2","ACGATACAACAACAAA",10,217.15,10.06,-0.71,0.06,2.75,1.01,0,">1 nonsynonymous","C61P Y121H K132I",3
"lib1","SARS-CoV-2","ACGATACAACCATAAC",1,14.63,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","W23V C49M F62R K94I G155E",5
"lib1","SARS-CoV-2","ACGATACCCAGATACT",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P G86R S129C",3
"lib1","SARS-CoV-2","ACGATACCCTGGAGAA",2,108.3,10.83,0.07,0.05,2.94,1.03,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","ACGATACCTATTGAAA",2,2.18,NA,NA,NA,NA,NA,NA,"stop","C49I F99I V103* K114M S139I P177T",6
"lib1","SARS-CoV-2","ACGATACTAAAATGAG",5,28.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E N58S",2
"lib1","SARS-CoV-2","ACGATACTACGACCTG",5,11.84,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A42S D90C I104R",3
"lib1","SARS-CoV-2","ACGATACTTAACTTTT",4,16.75,9.16,-1.6,0.14,2.24,1.03,0.01,">1 nonsynonymous","N4S A42S Q144L H189C",4
"lib1","SARS-CoV-2","ACGATAGAATTGGTAT",1,5.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T W106M L122Q L183R",4
"lib1","SARS-CoV-2","ACGATAGACGTAGGTG",1,15.38,8.73,-2.04,0.28,1.5,1.13,0.03,">1 nonsynonymous","Y50L D59T",2
"lib1","SARS-CoV-2","ACGATAGCCTGAACCC",1,56.65,6.09,-4.67,1.17,1.5,1.23,0.03,">1 nonsynonymous","N107C R127H",2
"lib1","SARS-CoV-2","ACGATATAATAAGCTA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","P54N Y121W S129*",3
"lib1","SARS-CoV-2","ACGATATAGAATTTCC",4,6.12,6.34,-4.43,0.65,1.5,1.11,0.03,">1 nonsynonymous","L57P G101K",2
"lib1","SARS-CoV-2","ACGATATATAAAAAAT",3,3.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","ACGATATATGATTGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","K48* Y143V",2
"lib1","SARS-CoV-2","ACGATATCCTGAAAGG",3,24.59,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","ACGATATGCAGGACTT",5,9.46,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","N1H Q84N G146V G196C",4
"lib1","SARS-CoV-2","ACGATATGCCTGAATA",4,68.48,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y93R Y119D E141T",3
"lib1","SARS-CoV-2","ACGATATGGCGTAACA",4,44.03,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G51K D59L Y143Q Q144E",4
"lib1","SARS-CoV-2","ACGATATTAAGTAACA",2,15.53,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G9R N58P R124S",3
"lib1","SARS-CoV-2","ACGATATTATGTCAAG",7,27.69,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C49H I72L P82N T140N",4
"lib1","SARS-CoV-2","ACGATATTCTTACATC",2,33.93,6.27,-4.49,0.44,3,1.22,0.01,">1 nonsynonymous","Y39C L95A W106P P161L G196L",5
"lib1","SARS-CoV-2","ACGATATTTCTCTCCT",1,27.39,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N4P S45P Y93F L162T",4
"lib1","SARS-CoV-2","ACGATCAAAATAAACT",9,160.03,10.71,-0.05,0.06,2.9,1.05,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","ACGATCAAACACTCGT",3,3.34,NA,NA,NA,NA,NA,NA,"stop","N13L A33V T85M Y91L G166*",5
"lib1","SARS-CoV-2","ACGATCAACCTGATCA",10,1.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118C",1
"lib1","SARS-CoV-2","ACGATCAACGAAAAGG",1,58.5,6.64,-4.12,0.42,1.5,1.12,0.02,">1 nonsynonymous","F8C N92K N151M",3
"lib1","SARS-CoV-2","ACGATCAAGATCTAAG",9,109.42,10.62,-0.15,0.06,2.95,1.03,0,"1 nonsynonymous","P54D",1
"lib1","SARS-CoV-2","ACGATCAATAGCCTAG",2,107.02,10.68,-0.09,0.04,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGATCAATATATAGG",1,101.39,10.77,0,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGATCATACAGAAAG",1,7.85,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","V71N D98I Y175R",3
"lib1","SARS-CoV-2","ACGATCATCCTTCCCG",2,10.21,8.59,-2.17,0.31,1.5,1.05,0.04,">1 nonsynonymous","L5P D59A G86M",3
"lib1","SARS-CoV-2","ACGATCCAATTCGGAC",2,12.67,8.87,-1.89,0.22,1.75,1.15,0.02,">1 nonsynonymous","N1R A89F",2
"lib1","SARS-CoV-2","ACGATCCCTTTATTTA",3,67.46,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9I Y93L F126S I142K K198E",5
"lib1","SARS-CoV-2","ACGATCCGGATCCTGA",6,121.06,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N24Y L131G Y178G",3
"lib1","SARS-CoV-2","ACGATCCTAAATATCA",2,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90N F126L A145N",3
"lib1","SARS-CoV-2","ACGATCGAACAGTACT",4,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P I104L Y123D",3
"lib1","SARS-CoV-2","ACGATCGACAGACAGT",4,107.3,10.69,-0.07,0.05,2.94,1.02,0,">1 nonsynonymous","R16N A33S",2
"lib1","SARS-CoV-2","ACGATCGCATTTACCC",6,91.72,10.68,-0.09,0.06,2.97,1,0,">1 nonsynonymous","K56L K132T",2
"lib1","SARS-CoV-2","ACGATCGCGGGCAAAA",2,12.9,7.96,-2.81,0.35,1.66,1.07,0.02,"1 nonsynonymous","Y175I",1
"lib1","SARS-CoV-2","ACGATCGCTAATACTT",3,33.67,8.49,-2.27,0.19,2.79,1.05,0.01,">1 nonsynonymous","N13E N58D F126R",3
"lib1","SARS-CoV-2","ACGATCGTACCTCATG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S N64R F70P S113I",4
"lib1","SARS-CoV-2","ACGATCGTGGGCTGAA",1,35.43,9.11,-1.65,0.17,1.74,1.12,0.02,">1 nonsynonymous","D34G N64I I104V E154C",4
"lib1","SARS-CoV-2","ACGATCTAGCACGATA",5,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K P54I T85P G117Q L125A I138S",6
"lib1","SARS-CoV-2","ACGATCTAGGGGTCTT",1,62.18,10.79,0.03,0.05,2.94,1.04,0,"1 nonsynonymous","R16A",1
"lib1","SARS-CoV-2","ACGATCTATATGATGG",3,21.7,8.49,-2.28,0.26,1.87,1.17,0.03,">1 nonsynonymous","T63V Y123T A145V",3
"lib1","SARS-CoV-2","ACGATCTTTACGCCAT",6,52.26,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6R D98I R124C A190R",4
"lib1","SARS-CoV-2","ACGATGAAAACACGGA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y L183P",2
"lib1","SARS-CoV-2","ACGATGAATGGAGTCG",5,72.36,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11N A22G L60D Y119M Y165S N171M",6
"lib1","SARS-CoV-2","ACGATGACTCCTATTA",3,50.41,10.66,-0.11,0.06,2.96,1,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","ACGATGAGCTTACACT",3,107.19,10.71,-0.06,0.06,2.92,1.06,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","ACGATGATAGTCGGTC",1,22.03,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C6R A105V Y143R T201R",4
"lib1","SARS-CoV-2","ACGATGATCAATCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A V77W P149M",3
"lib1","SARS-CoV-2","ACGATGATGCACATAA",1,36.17,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I28V R124N N151K G174K",4
"lib1","SARS-CoV-2","ACGATGATTTCTTAAT",6,76.2,9.35,-1.42,0.1,2.47,1.12,0,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","ACGATGCACAAATTAT",3,29.23,8.16,-2.61,0.16,1.5,1.12,0.01,"1 nonsynonymous","C102Y",1
"lib1","SARS-CoV-2","ACGATGCATGTAGCAA",2,34.55,10.71,-0.05,0.08,2.84,1.12,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","ACGATGCCAACTAGAG",1,9.25,6,-4.76,2,3,1.13,0.07,">1 nonsynonymous","T15D P82I C102V",3
"lib1","SARS-CoV-2","ACGATGCCATGAGCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L D90L F99I",3
"lib1","SARS-CoV-2","ACGATGCCCTGACGGA",4,23.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N13L K87Y Y93S",3
"lib1","SARS-CoV-2","ACGATGCTCATTACCG",1,36.13,9.17,-1.59,0.18,2.6,1.09,0.02,">1 nonsynonymous","V11I K128C",2
"lib1","SARS-CoV-2","ACGATGGATCCAAGCT",6,68.65,9.96,-0.81,0.09,2.03,1.05,0,">1 nonsynonymous","D34A L57Q",2
"lib1","SARS-CoV-2","ACGATGGCCATTATCA",1,12.02,10.71,-0.05,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGATGGCTATGTATC",5,103.98,8.15,-2.62,0.12,2.38,1.15,0,">1 nonsynonymous","T100S N171D",2
"lib1","SARS-CoV-2","ACGATGGTTAAAATCA",2,21.49,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D90C P177S R179D",3
"lib1","SARS-CoV-2","ACGATGTCAACCGTGG",3,45.14,9.96,-0.81,0.05,2.87,1.07,0,">1 nonsynonymous","E10I T170S",2
"lib1","SARS-CoV-2","ACGATGTCAAGTCCAC",4,22.69,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","I104K E141F",2
"lib1","SARS-CoV-2","ACGATGTCAGTGTAAC",6,174.4,10.65,-0.11,0.04,2.96,1.01,0,">1 nonsynonymous","G9F Q163S",2
"lib1","SARS-CoV-2","ACGATGTCGTAAATTA",3,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D Y143P",2
"lib1","SARS-CoV-2","ACGATGTGACAGAAAA",18,122.68,6.21,-4.55,0.49,1.5,1.17,0.01,">1 nonsynonymous","F12S V180S",2
"lib1","SARS-CoV-2","ACGATGTTCGGGTTGT",5,47.43,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","N1M Y35W L60S L95W P133I Y143P T148G G166Q",8
"lib1","SARS-CoV-2","ACGATTAAATACCGCC",2,19.19,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I2W V32D P96F S129N G146E",5
"lib1","SARS-CoV-2","ACGATTAAATTTTATA",3,8.73,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D59M V65F E76Y W106C N151R",5
"lib1","SARS-CoV-2","ACGATTACGGTTTATT",4,37.91,10.71,-0.05,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGATTACGTATGATG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1T D97T N171V Y178S K198*",5
"lib1","SARS-CoV-2","ACGATTACGTGACAAT",1,31.95,9.88,-0.88,0.11,2.05,1.09,0,">1 nonsynonymous","T15M F47Y T55S T140M",4
"lib1","SARS-CoV-2","ACGATTACTCCATCGA",2,60.96,10.61,-0.15,0.07,2.95,1,0,">1 nonsynonymous","V37S F156I",2
"lib1","SARS-CoV-2","ACGATTAGAACAAAGA",5,34.77,9.44,-1.32,0.24,1.75,1.15,0.02,">1 nonsynonymous","T46I D98I E135S",3
"lib1","SARS-CoV-2","ACGATTAGTCAAACTA",2,1.02,NA,NA,NA,NA,NA,NA,"stop","F156T Y175*",2
"lib1","SARS-CoV-2","ACGATTCACAATACAG",5,121.19,9.07,-1.69,0.16,2.01,1.12,0.01,">1 nonsynonymous","G51S Q176H",2
"lib1","SARS-CoV-2","ACGATTCACACAGAAA",4,56.6,10.12,-0.64,0.06,2.88,1,0,">1 nonsynonymous","C6L V32S K56N",3
"lib1","SARS-CoV-2","ACGATTCAGCATGCTA",4,28.82,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9I G117P Y123T D137E",4
"lib1","SARS-CoV-2","ACGATTCATTGTTAAA",6,0.89,NA,NA,NA,NA,NA,NA,"stop","L38M L60* I80V R124M E141D",5
"lib1","SARS-CoV-2","ACGATTCCATCGTGAG",6,40.42,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N4D R127E Q176V",3
"lib1","SARS-CoV-2","ACGATTCCCAAAGTAA",1,23.19,6.16,-4.61,1.02,1.5,1.19,0.04,">1 nonsynonymous","T3Y E10I N92L T170S Y175S",5
"lib1","SARS-CoV-2","ACGATTCTTTAACTGC",6,3.16,NA,NA,NA,NA,NA,NA,"stop","N92V L122A T201*",3
"lib1","SARS-CoV-2","ACGATTGGACAAGAAC",2,30.17,6.23,-4.53,0.74,1.5,1.19,0.02,">1 nonsynonymous","T3S L95P W106A V115F L122A K198Q",6
"lib1","SARS-CoV-2","ACGATTGTCCCAAGAG",6,108.82,10.41,-0.35,0.04,2.92,1.02,0,">1 nonsynonymous","V37P N64P K132N",3
"lib1","SARS-CoV-2","ACGATTTAAAATTGTA",5,43.11,10.72,-0.05,0.04,2.97,1,0,"1 nonsynonymous","T85Y",1
"lib1","SARS-CoV-2","ACGATTTACATAACTT",6,89.09,6.04,-4.73,1.08,1.5,1.15,0.02,">1 nonsynonymous","G9D C61A P177V K199V",4
"lib1","SARS-CoV-2","ACGATTTACCTAATAC",2,28.1,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A105S K132P Y165P",3
"lib1","SARS-CoV-2","ACGATTTAGGGCATCC",8,104.82,10.53,-0.23,0.04,2.9,1.03,0,">1 nonsynonymous","C61L S184A",2
"lib1","SARS-CoV-2","ACGATTTCCAAATAAA",2,24.5,6,-4.76,2,3,1.21,0,">1 nonsynonymous","G9L K48N L60P Q176K",4
"lib1","SARS-CoV-2","ACGATTTCCATACAAA",1,10.95,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","ACGATTTCTATGAACG",5,44.73,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C6Y K94S S113I R136T Y165Q Q168H",6
"lib1","SARS-CoV-2","ACGATTTTACACAACG",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L K56L",2
"lib1","SARS-CoV-2","ACGATTTTAGCCTGAT",4,65.99,10.77,0.01,0.06,2.92,1.05,0,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","ACGATTTTGTCATAAT",3,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R G74S I88F",3
"lib1","SARS-CoV-2","ACGATTTTTTAAAGAA",6,0.52,NA,NA,NA,NA,NA,NA,"stop","A14D K94S F134* C158L",4
"lib1","SARS-CoV-2","ACGATTTTTTATTTTA",2,70.84,10.19,-0.58,0.03,2.93,1.02,0,"1 nonsynonymous","Y91I",1
"lib1","SARS-CoV-2","ACGCAAAAAATAGGAA",2,20.03,10.13,-0.63,0.1,2.68,1.02,0,">1 nonsynonymous","D98I G155R",2
"lib1","SARS-CoV-2","ACGCAAAACATATATG",7,68.12,9.24,-1.52,0.12,1.84,1.12,0.01,">1 nonsynonymous","A14F V77L I138C",3
"lib1","SARS-CoV-2","ACGCAAAACTGGGGTG",2,21.6,10.7,-0.07,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAAAATCACCTCC",5,1.8,NA,NA,NA,NA,NA,NA,"stop","N4T N24* G83S N120K",4
"lib1","SARS-CoV-2","ACGCAAAATCGCGGGC",2,18.69,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C31F G86D D112K",3
"lib1","SARS-CoV-2","ACGCAAAATGACCGTT",6,108.36,10.79,0.02,0.1,2.8,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAAACATTCAAGC",1,24.65,6.39,-4.37,0.62,1.5,1.1,0.04,">1 nonsynonymous","A42L Y66K K94T L122A R127L",5
"lib1","SARS-CoV-2","ACGCAAACCCGATAAG",4,1.04,NA,NA,NA,NA,NA,NA,"stop","L57V N107* S184G",3
"lib1","SARS-CoV-2","ACGCAAACCTAAGGTA",10,60.48,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19F V65E K87F Y119V T140H",5
"lib1","SARS-CoV-2","ACGCAAACTCATTAGA",1,52.59,10.84,0.08,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAAACTGGCTGCA",2,79.23,10.68,-0.08,0.08,2.92,1.07,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","ACGCAAACTTCATACA",4,79.89,10.7,-0.06,0.06,2.87,1.08,0,">1 nonsynonymous","Y39K H189Y",2
"lib1","SARS-CoV-2","ACGCAAAGAAACTACC",3,11.94,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","A42R A89N K128T P169H H189Y",5
"lib1","SARS-CoV-2","ACGCAAAGTATACGAA",2,23.35,6,-4.76,1.53,3,1.19,0.01,">1 nonsynonymous","C6Y I88G P96T Y119G",4
"lib1","SARS-CoV-2","ACGCAAATAATTTTGT",1,5.39,NA,NA,NA,NA,NA,NA,"stop","A14H Y39A N58I V71* A89T L122P",6
"lib1","SARS-CoV-2","ACGCAAATCATAATCA",2,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M N92L W106A",3
"lib1","SARS-CoV-2","ACGCAAATTTTAGAAG",4,7.14,6.07,-4.69,1.22,1.5,1.11,0.05,">1 nonsynonymous","I72L V182Q",2
"lib1","SARS-CoV-2","ACGCAACAATTTCAAC",7,60.34,6.1,-4.66,0.95,1.5,1.25,0.02,">1 nonsynonymous","T46G N107Q I138K F156D",4
"lib1","SARS-CoV-2","ACGCAACATTCGCAAT",5,36.01,10.75,-0.02,0.07,2.89,1.09,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","ACGCAACCTGAGCAGC",2,94.15,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T15D Y123C N157L Q176R",4
"lib1","SARS-CoV-2","ACGCAACCTTTCACCG",7,24.84,8.65,-2.11,0.34,1.5,1,0.08,">1 nonsynonymous","A22T A89R D98E",3
"lib1","SARS-CoV-2","ACGCAACGTACCCTCA",2,78.87,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","T46E G86I",2
"lib1","SARS-CoV-2","ACGCAACTTTATTGGC",1,1.42,NA,NA,NA,NA,NA,NA,"stop","A18L P96I A105R E154*",4
"lib1","SARS-CoV-2","ACGCAAGATAGTGTAA",1,63.97,10.68,-0.08,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAAGCTCACAAAG",1,26.1,10.03,-0.73,0.16,1.99,1,0.01,">1 nonsynonymous","S41P V52F A89V",3
"lib1","SARS-CoV-2","ACGCAAGGAAGCTATT",4,37.22,8.24,-2.52,0.14,2.16,1.09,0.01,">1 nonsynonymous","D112V S164E",2
"lib1","SARS-CoV-2","ACGCAAGGGCTCGACT",2,13.5,10.02,-0.75,0.16,2.55,1.02,0.02,">1 nonsynonymous","V37S W106R",2
"lib1","SARS-CoV-2","ACGCAAGGGGACGAGG",5,83.94,9.56,-1.2,0.2,1.64,1.18,0.02,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","ACGCAAGTGAGAAAGG",8,64.34,10.77,0,0.07,2.88,1.08,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ACGCAAGTGCCCCTGG",3,108.81,10.7,-0.06,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAATAAAAACAAT",7,102.46,7.15,-3.61,0.27,1.5,1.17,0.02,">1 nonsynonymous","C6T K128D G146Y",3
"lib1","SARS-CoV-2","ACGCAATAACCAATCG",1,74,10.74,-0.03,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAATAAGCTAGAT",1,30.93,8.67,-2.1,0.16,1.76,1.1,0.01,">1 nonsynonymous","V77R D98N A105T N118I",4
"lib1","SARS-CoV-2","ACGCAATAATCCAGAG",8,153.7,10.62,-0.15,0.04,2.9,1.04,0,"1 nonsynonymous","N64I",1
"lib1","SARS-CoV-2","ACGCAATACACTCTTA",4,17.73,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K94E I138S N157F G166T",4
"lib1","SARS-CoV-2","ACGCAATACCATAGCT",11,104.61,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","W106L Y175C",2
"lib1","SARS-CoV-2","ACGCAATCAAGACAAG",1,53.77,6.35,-4.41,0.41,1.5,1.13,0.01,">1 nonsynonymous","F44C N64W I142R P149E",4
"lib1","SARS-CoV-2","ACGCAATGCGATCTTC",6,0.93,NA,NA,NA,NA,NA,NA,"stop","A33T C49S V65R W106* N118L L187Q",6
"lib1","SARS-CoV-2","ACGCAATTAATAAGGA",1,40.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38S S69K I88M D112K P149L",5
"lib1","SARS-CoV-2","ACGCAATTACTTTAAT",4,23.47,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N92I P133L",2
"lib1","SARS-CoV-2","ACGCACAACATTTTTG",2,1.4,NA,NA,NA,NA,NA,NA,"stop","C6S C61R G86T Y123M G146S G152*",6
"lib1","SARS-CoV-2","ACGCACAATCCGTAAT",3,40.55,10.78,0.02,0.08,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCACACAATGCTAT",6,30.35,6,-4.76,2,1.5,1.4,0.04,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","ACGCACACGACTGCTC",3,29.05,10.02,-0.74,0.04,2.94,1,0,"1 nonsynonymous","G146N",1
"lib1","SARS-CoV-2","ACGCACACTCATTTAG",4,40.12,10.83,0.06,0.08,2.93,1.04,0,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","ACGCACAGATTTTTCT",3,64.33,9.23,-1.54,0.06,2.95,1.07,0,">1 nonsynonymous","N1R D97Y Q168L L188T",4
"lib1","SARS-CoV-2","ACGCACATACATGCCC",8,61.79,6,-4.76,1.59,1.5,1.13,0.01,">1 nonsynonymous","S69N L95A",2
"lib1","SARS-CoV-2","ACGCACATCCCTAGGC",4,78.4,10.71,-0.06,0.04,2.89,1.07,0,"1 nonsynonymous","E141A",1
"lib1","SARS-CoV-2","ACGCACATCTCCAAAG",3,116.28,10.72,-0.04,0.07,2.93,1.03,0,"1 nonsynonymous","S53V",1
"lib1","SARS-CoV-2","ACGCACATGAAGATAA",4,56.95,6,-4.76,1.66,1.5,1.14,0.01,">1 nonsynonymous","L5S F12S N107I",3
"lib1","SARS-CoV-2","ACGCACATGTTACAGA",4,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R Y165M",2
"lib1","SARS-CoV-2","ACGCACATTAAAGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q163S V180N",2
"lib1","SARS-CoV-2","ACGCACCAATCTTCTA",1,31.11,10.81,0.05,0.1,2.84,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGCACCACAGTGATG",1,21.87,8.68,-2.09,0.12,2.64,1.04,0.01,">1 nonsynonymous","P7Y N157S",2
"lib1","SARS-CoV-2","ACGCACCGTAGAAAAA",5,64.65,10.84,0.07,0.09,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGCACCTAAACACAC",4,8.25,6,-4.76,0.8,3,1.03,0,">1 nonsynonymous","K56R P96W V103F L162F",4
"lib1","SARS-CoV-2","ACGCACGAACTTATGG",3,73.5,8.78,-1.98,0.13,2.44,1.09,0.01,">1 nonsynonymous","N107R P169D",2
"lib1","SARS-CoV-2","ACGCACGCTTTACATG",1,39.78,9.52,-1.25,0.18,1.67,1.18,0.02,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","ACGCACTAATTACAAG",5,27.98,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y21K K56A F99S G174A",4
"lib1","SARS-CoV-2","ACGCACTGAAAGTATA",7,127.01,10.77,0.01,0.06,2.9,1.07,0,">1 nonsynonymous","G9M V37F L188M",3
"lib1","SARS-CoV-2","ACGCACTGCTAAGTCT",2,2.04,NA,NA,NA,NA,NA,NA,"stop","E10S F47L T55*",3
"lib1","SARS-CoV-2","ACGCAGAAACAGCACG",6,110.63,10.51,-0.26,0.05,2.88,1.06,0,">1 nonsynonymous","N1E D97A K132G",3
"lib1","SARS-CoV-2","ACGCAGAAACCAAAGG",7,3.58,NA,NA,NA,NA,NA,NA,"stop","P7L E10* K26* T63F Q79H F167C",6
"lib1","SARS-CoV-2","ACGCAGAACGATCGTA",6,1.97,NA,NA,NA,NA,NA,NA,"stop","P149Q Y165*",2
"lib1","SARS-CoV-2","ACGCAGACAAAAATAC",1,6.39,10.44,-0.32,0.12,2.69,1.26,0.01,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","ACGCAGACACGTCAAA",5,23.75,8.42,-2.34,0.31,1.65,1.08,0.04,">1 nonsynonymous","S45V G146M L187N",3
"lib1","SARS-CoV-2","ACGCAGACATAAACAG",8,71.43,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F12C N40T G116K V181W",4
"lib1","SARS-CoV-2","ACGCAGAGAATAATAC",1,42.71,10.48,-0.28,0.05,2.85,1.05,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","ACGCAGAGAATACTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","R73C S200*",2
"lib1","SARS-CoV-2","ACGCAGATACTCCAAG",5,34.18,10.83,0.06,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAGCGAGACCTCC",2,18.42,6,-4.76,2,1.5,1.21,0.04,"1 nonsynonymous","V20K",1
"lib1","SARS-CoV-2","ACGCAGCTAGTACCAA",4,5.98,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S45V Y143T F160Y V182R",4
"lib1","SARS-CoV-2","ACGCAGGAAATCACAT",1,30.77,9.42,-1.35,0.12,2.61,1.14,0.01,">1 nonsynonymous","A42E Y91W Q144R",3
"lib1","SARS-CoV-2","ACGCAGGAGTACCCAT",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y K87E A105S Y165F",4
"lib1","SARS-CoV-2","ACGCAGGCAAACACCC",4,79.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N V115I",2
"lib1","SARS-CoV-2","ACGCAGTACAAAGCCA",1,19.49,9.52,-1.25,0.16,2.65,1.08,0.01,">1 nonsynonymous","C6Y T63A G174P",3
"lib1","SARS-CoV-2","ACGCAGTACTATTATG",1,35.25,10.73,-0.03,0.07,2.83,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCAGTCTTTGTTAC",1,46.88,10.61,-0.15,0.08,2.87,1.08,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","ACGCAGTTCCAGACAA",2,11.44,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C49Y F134S",2
"lib1","SARS-CoV-2","ACGCAGTTGTAATGAT",3,19.01,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R25V Y35L T85Q I104S H189L",5
"lib1","SARS-CoV-2","ACGCATAAACACAAAA",3,29.78,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V52G S113L",2
"lib1","SARS-CoV-2","ACGCATACAGCTTCCA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56H N110C G146L",3
"lib1","SARS-CoV-2","ACGCATAGCTATCTGT",1,5.63,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F62T K87N G116S L125W G146K Q168M",6
"lib1","SARS-CoV-2","ACGCATATTTCCAAAT",6,111.2,10.71,-0.05,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCATCAGAACCGAC",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L D97F",2
"lib1","SARS-CoV-2","ACGCATCCGTCGACAG",13,159.82,10.23,-0.54,0.05,2.95,1,0,">1 nonsynonymous","K87C T100S",2
"lib1","SARS-CoV-2","ACGCATCGAACGACAG",3,7.37,NA,NA,NA,NA,NA,NA,"stop","V71E S113*",2
"lib1","SARS-CoV-2","ACGCATCTCGCCACAT",8,27.72,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L57V R136V I142V V180P",4
"lib1","SARS-CoV-2","ACGCATCTGATAACAA",10,38.22,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","K26T V103R N120L E154K",4
"lib1","SARS-CoV-2","ACGCATGAACATGTAG",4,1.08,NA,NA,NA,NA,NA,NA,"stop","C61V D90* Y119T",3
"lib1","SARS-CoV-2","ACGCATGACAAAATCG",1,21.35,10.84,0.08,0.12,2.87,1.04,0.01,">1 nonsynonymous","L5M K199N",2
"lib1","SARS-CoV-2","ACGCATGCAATATAAA",2,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L V52G D97W R136H N151Y",5
"lib1","SARS-CoV-2","ACGCATGCATAGATAA",4,45.21,10.81,0.05,0.04,2.93,1,0,"1 nonsynonymous","S200F",1
"lib1","SARS-CoV-2","ACGCATGTTGACTCAG",3,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","ACGCATGTTTTGGAAC",6,68.76,9.73,-1.03,0.05,2.92,1.03,0,">1 nonsynonymous","R27T T170H",2
"lib1","SARS-CoV-2","ACGCATTAAACAAACT",4,55.75,7.3,-3.47,0.33,1.5,1.07,0.03,">1 nonsynonymous","Y35S V77R Y119R S200Y",4
"lib1","SARS-CoV-2","ACGCATTAAATTGACA",1,12.72,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S19M N64A A81S L131T H189D",5
"lib1","SARS-CoV-2","ACGCATTAACGAAGAA",7,88.81,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C61V K128N F134P I142H",4
"lib1","SARS-CoV-2","ACGCATTATAGAATGG",1,45.35,10.19,-0.58,0.16,2.73,1.25,0.01,">1 nonsynonymous","G83C Q84M K87N",3
"lib1","SARS-CoV-2","ACGCATTTCCTGTTAT",7,8.51,NA,NA,NA,NA,NA,NA,"stop","D68* V103K V153M K198T",4
"lib1","SARS-CoV-2","ACGCATTTTTGAGAAT",3,16.39,10.51,-0.26,0.09,2.81,1.02,0,">1 nonsynonymous","K128D R136I",2
"lib1","SARS-CoV-2","ACGCCAAAAAGGATTC",8,99.8,10.03,-0.73,0.11,2.42,1.04,0.01,">1 nonsynonymous","A14R E135S A192E",3
"lib1","SARS-CoV-2","ACGCCAAAACCGACAG",8,2.16,NA,NA,NA,NA,NA,NA,"stop","C49* P54D",2
"lib1","SARS-CoV-2","ACGCCAAATTATCTAT",1,10.99,10.51,-0.25,0.1,2.97,1,0.01,"1 nonsynonymous","I28V",1
"lib1","SARS-CoV-2","ACGCCAACATCCGACC",1,32.63,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V37T P82F Y119F",3
"lib1","SARS-CoV-2","ACGCCAACCACAGCCA",3,146.89,10.56,-0.21,0.03,2.95,1.02,0,">1 nonsynonymous","Y178N A192S",2
"lib1","SARS-CoV-2","ACGCCAACTCAGTTCC",2,32.95,6,-4.76,1.12,1.5,1.14,0.02,">1 nonsynonymous","C49V D68I K114R S147C C158V",5
"lib1","SARS-CoV-2","ACGCCAAGAGGATCAT",2,29.1,10.36,-0.4,0.04,2.86,1.05,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","ACGCCAAGGGCTTCAA",12,128.01,8.59,-2.18,0.14,1.93,1.14,0.01,">1 nonsynonymous","N1S E76H Y165C",3
"lib1","SARS-CoV-2","ACGCCAATAAAAGCTA",5,25.55,8.19,-2.58,0.2,1.69,1.19,0.02,">1 nonsynonymous","Y50T G83S F156L Q168Y",4
"lib1","SARS-CoV-2","ACGCCACAGATGGTGT",1,30.42,10.34,-0.42,0.09,2.74,1.14,0,">1 nonsynonymous","P7L Y35I P54A S164Y K199G",5
"lib1","SARS-CoV-2","ACGCCACCGTAAAGCC",4,16.04,6.17,-4.59,1.17,1.5,1.19,0.07,">1 nonsynonymous","A81P F99R F160V",3
"lib1","SARS-CoV-2","ACGCCACGAAGTGATA",1,260.94,9.65,-1.11,0.04,2.89,1.04,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","ACGCCACTAATCAACT",4,1.54,NA,NA,NA,NA,NA,NA,"stop","Y35V L57G I72F G83Y L131*",5
"lib1","SARS-CoV-2","ACGCCACTTACAATAG",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T W106L L183R",3
"lib1","SARS-CoV-2","ACGCCAGAAAAAACTA",7,33.94,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6W D68G",2
"lib1","SARS-CoV-2","ACGCCAGACATGTTTA",1,178.51,10.76,-0.01,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCCAGATTACTGTA",1,11.99,10.41,-0.35,0.1,3,1,0.01,"1 nonsynonymous","T85P",1
"lib1","SARS-CoV-2","ACGCCAGGGATCATTG",5,69.79,6,-4.76,2,3,1.2,0,">1 nonsynonymous","L5I T46S D68A W106E",4
"lib1","SARS-CoV-2","ACGCCAGTTCAATGTA",4,38.47,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R16E Y93K C158M G166T",4
"lib1","SARS-CoV-2","ACGCCATACCTAACCA",1,84.6,10.76,-0.01,0.04,2.93,1.05,0,">1 nonsynonymous","I2S K26R T100L",3
"lib1","SARS-CoV-2","ACGCCATCCTACCATA",1,5.78,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","N1M L38R G117I T170D",4
"lib1","SARS-CoV-2","ACGCCATGTGGGCGAA",4,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126G N157Y",2
"lib1","SARS-CoV-2","ACGCCATTAATTATGA",1,7.63,10.51,-0.25,0.08,2.96,1.06,0,">1 nonsynonymous","S29Y D75Q S200G",3
"lib1","SARS-CoV-2","ACGCCATTATGAAAGT",2,54.72,10.54,-0.23,0.06,2.86,1.03,0,">1 nonsynonymous","T15V N64V",2
"lib1","SARS-CoV-2","ACGCCCAAATCCATTA",6,85.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23E W106R L125W",3
"lib1","SARS-CoV-2","ACGCCCACACTGTCAT",7,83.61,10.66,-0.1,0.08,2.9,1.08,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","ACGCCCACTACCGTAA",3,24.69,7.9,-2.87,0.17,1.94,1.12,0.01,">1 nonsynonymous","C6R I138W",2
"lib1","SARS-CoV-2","ACGCCCAGTACCAAAC",3,58.27,10.44,-0.32,0.05,2.88,1.05,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","ACGCCCAGTATCGTTT",6,51.36,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89V G146P",2
"lib1","SARS-CoV-2","ACGCCCAGTGTTTCGG",16,109.11,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G116F L131D",2
"lib1","SARS-CoV-2","ACGCCCATACCACATT",4,35.68,8.57,-2.2,0.16,2.31,1.06,0.01,">1 nonsynonymous","I104K Y121S F167R",3
"lib1","SARS-CoV-2","ACGCCCCATTACCCCT",4,104.57,10.77,0.01,0.06,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCCCCCAGCGTTTA",4,51.24,10.15,-0.61,0.1,2.94,1,0.01,">1 nonsynonymous","K87S T140V",2
"lib1","SARS-CoV-2","ACGCCCGCATTAGAAG",1,31.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62D N120W T140P",3
"lib1","SARS-CoV-2","ACGCCCTAGCCATAAT",12,191.86,9.92,-0.84,0.09,2.11,1.03,0,">1 nonsynonymous","N58I L95V S129L T201A",4
"lib1","SARS-CoV-2","ACGCCCTAGCCTAACA",5,15.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46N D68K F99N I104H",4
"lib1","SARS-CoV-2","ACGCCCTTATTATTCA",5,27.28,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W23L G101V K114E L131P",4
"lib1","SARS-CoV-2","ACGCCGATCACTATTG",3,46.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V S69K N120Y F134N K199M",5
"lib1","SARS-CoV-2","ACGCCGATTGGATAAT",6,9.52,9.74,-1.03,0.24,1.5,1.04,0.04,">1 nonsynonymous","N13I D34Y V52F C61S D97V G152T",6
"lib1","SARS-CoV-2","ACGCCGCTAAAGACAG",5,3.86,NA,NA,NA,NA,NA,NA,"stop","E10H F70* N120C Q168V",4
"lib1","SARS-CoV-2","ACGCCGCTACCTACAC",1,9,6.95,-3.82,0.54,1.6,1.13,0.07,">1 nonsynonymous","A22K D68G G83Y P133S T201M",5
"lib1","SARS-CoV-2","ACGCCGCTGAAGAACA",4,23.4,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N4I F12K S69G R78H C102E T201S",6
"lib1","SARS-CoV-2","ACGCCGCTTTACCTAG",2,31.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y93T P133L",2
"lib1","SARS-CoV-2","ACGCCGGGCATGAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","R16V K56T T63F F126K N157*",5
"lib1","SARS-CoV-2","ACGCCGTAAACTTACT",6,35.04,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","L5Y R25L P96L F156P",4
"lib1","SARS-CoV-2","ACGCCGTCTCTCTGGA",8,136.28,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S29P G101Q K199P",3
"lib1","SARS-CoV-2","ACGCCTAACATTCCAC",5,60.56,6,-4.76,1.37,1.5,1.26,0.03,">1 nonsynonymous","C102R N157I L188N K199L",4
"lib1","SARS-CoV-2","ACGCCTAAGCGGGATA",4,0,NA,NA,NA,NA,NA,NA,"stop","N107R P133* C150P",3
"lib1","SARS-CoV-2","ACGCCTACCGAGTAAG",2,32.89,6,-4.76,2,1.5,1.43,0.06,">1 nonsynonymous","C150R Y178A A190P S200L",4
"lib1","SARS-CoV-2","ACGCCTATACACTAAT",2,48.99,10.88,0.11,0.11,2.85,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGCCTATACAGTAAC",3,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H S36N I80W Y91L",4
"lib1","SARS-CoV-2","ACGCCTATTCACTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R T15L K26C F99*",4
"lib1","SARS-CoV-2","ACGCCTCATCTGTCCA",3,46.67,10.54,-0.22,0.03,2.97,1.01,0,">1 nonsynonymous","P7L L60M P149E",3
"lib1","SARS-CoV-2","ACGCCTCCATCCTTAC",3,96.48,9.97,-0.8,0.08,2.42,1,0,">1 nonsynonymous","G51E S139N",2
"lib1","SARS-CoV-2","ACGCCTCTCTGCAACA",18,203.51,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8L N92M A105D Y175D",4
"lib1","SARS-CoV-2","ACGCCTCTTACAGAGT",2,4.24,NA,NA,NA,NA,NA,NA,"stop","A14R P96S N151*",3
"lib1","SARS-CoV-2","ACGCCTGACAGATATG",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I Y91L N107H",3
"lib1","SARS-CoV-2","ACGCCTGACGAGATCC",9,76.76,10.19,-0.58,0.04,2.88,1,0,">1 nonsynonymous","A89C T148Y T201L",3
"lib1","SARS-CoV-2","ACGCCTGAGACTGTAG",9,84.4,8.78,-1.98,0.18,1.54,1.18,0.01,">1 nonsynonymous","T85C W106V",2
"lib1","SARS-CoV-2","ACGCCTGTCCGTATGG",11,170.6,9.8,-0.96,0.09,2.05,1.07,0,">1 nonsynonymous","S45L C61V T100H",3
"lib1","SARS-CoV-2","ACGCCTTACGAATAAA",4,12.55,10.66,-0.1,0.17,2.82,1.09,0.02,"1 nonsynonymous","T140D",1
"lib1","SARS-CoV-2","ACGCCTTAGTATTAAA",2,26.68,10,-0.76,0.13,1.89,1.03,0.01,">1 nonsynonymous","T3L G9R A22S D34K T100C",5
"lib1","SARS-CoV-2","ACGCCTTCGCATTAGC",7,36.65,10.83,0.06,0.12,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCCTTGCAACCCTA",4,134.01,10.74,-0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCCTTTAAGCGACG",11,2.19,NA,NA,NA,NA,NA,NA,"stop","V71* D112H L122P",3
"lib1","SARS-CoV-2","ACGCGAAAATATAGAG",5,55.22,6,-4.76,1.32,1.5,1.08,0,">1 nonsynonymous","F47Y Y119V F134I P191T",4
"lib1","SARS-CoV-2","ACGCGAACTTTCAGAC",6,34.76,9.75,-1.02,0.12,2.54,1.16,0.01,">1 nonsynonymous","I2C S41L D90T",3
"lib1","SARS-CoV-2","ACGCGAATAACGGTAA",5,67.11,10.77,0.01,0.06,2.91,1.06,0,">1 nonsynonymous","N4T L122T",2
"lib1","SARS-CoV-2","ACGCGACAAACTTACG",8,0.8,NA,NA,NA,NA,NA,NA,"stop","L95* T201F",2
"lib1","SARS-CoV-2","ACGCGACAGAATAACT",2,9.19,7.57,-3.2,0.33,1.5,1,0.02,">1 nonsynonymous","D137P T201L",2
"lib1","SARS-CoV-2","ACGCGACATAATAATG",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F S36L D68F T148V F156W F167S",6
"lib1","SARS-CoV-2","ACGCGACGACAAAAAT",8,35.32,8.73,-2.03,0.11,1.88,1.16,0.01,">1 nonsynonymous","D34S N118V",2
"lib1","SARS-CoV-2","ACGCGACGATAAGGCT",4,42.87,9.24,-1.52,0.19,1.63,1.22,0.01,">1 nonsynonymous","C6D C31S V37K F44Q F62V G116L",6
"lib1","SARS-CoV-2","ACGCGACTGTGACCGC",2,9.89,9.87,-0.9,0.23,1.85,1,0.03,"1 nonsynonymous","Y91D",1
"lib1","SARS-CoV-2","ACGCGAGAAACACGTG",3,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T F99C",2
"lib1","SARS-CoV-2","ACGCGAGAGAATATAC",1,56.48,10.68,-0.09,0.09,2.79,1.1,0,"1 nonsynonymous","S164T",1
"lib1","SARS-CoV-2","ACGCGAGATATAAAAT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44W I104R D112M G152A C158N",5
"lib1","SARS-CoV-2","ACGCGAGATGGTTGCA",7,70.2,10.74,-0.02,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCGAGATTGTATTA",4,42.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6A K48Q D59G K114T R124Q G152Y F156W",7
"lib1","SARS-CoV-2","ACGCGAGCAACAAGTC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V G116L F167R",3
"lib1","SARS-CoV-2","ACGCGAGCGAATAACA",5,61.85,10.82,0.06,0.06,2.92,1.03,0,"1 nonsynonymous","G152R",1
"lib1","SARS-CoV-2","ACGCGAGTATAAGCCT",5,1.63,NA,NA,NA,NA,NA,NA,"stop","A22* C49S A67Y Y119G",4
"lib1","SARS-CoV-2","ACGCGATAAACCCCTA",6,40.22,7.6,-3.16,0.49,1.5,1.04,0.07,">1 nonsynonymous","F12M V77S V103M",3
"lib1","SARS-CoV-2","ACGCGATAACAAAGAA",7,116.42,9.02,-1.74,0.07,2.54,1.11,0,">1 nonsynonymous","N13D G146T",2
"lib1","SARS-CoV-2","ACGCGATAACAGTGCT",2,5.5,6,-4.76,1.25,3,1.09,0.01,">1 nonsynonymous","L57G C102T",2
"lib1","SARS-CoV-2","ACGCGATAACGGTGAG",3,15.28,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","V11D T46A V103D I104V",4
"lib1","SARS-CoV-2","ACGCGATGAGTGCTAA",5,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A R127V F167L G172E",4
"lib1","SARS-CoV-2","ACGCGATTTTACCTAA",5,122.75,9.64,-1.13,0.03,2.9,1.06,0,">1 nonsynonymous","K87V F156L",2
"lib1","SARS-CoV-2","ACGCGCAATCATAGAA",3,68.52,10.38,-0.38,0.06,2.85,1.05,0,"1 nonsynonymous","S36P",1
"lib1","SARS-CoV-2","ACGCGCACTTGAAGAT",1,23.72,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G83P R136T C150N",3
"lib1","SARS-CoV-2","ACGCGCAGACAAGAAC",6,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118T S184V",2
"lib1","SARS-CoV-2","ACGCGCAGAGGAAAAG",1,35.39,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","E10L S41E C49V R73K",4
"lib1","SARS-CoV-2","ACGCGCAGATCACAGG",2,11.29,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4T F44E P96K G146E N151K F156K",6
"lib1","SARS-CoV-2","ACGCGCCACTTGCTTA",1,18.63,6.45,-4.31,0.53,1.5,1.17,0.02,">1 nonsynonymous","L60V Y165K",2
"lib1","SARS-CoV-2","ACGCGCCTAACAGCAA",1,68.5,9.9,-0.87,0.09,2.69,1,0,">1 nonsynonymous","S41F F62R G155S",3
"lib1","SARS-CoV-2","ACGCGCCTAATACATG",4,120.61,8.87,-1.9,0.08,2.82,1.09,0,">1 nonsynonymous","T85I D97L L125R",3
"lib1","SARS-CoV-2","ACGCGCCTAGATTCGT",1,15.16,10.47,-0.29,0.19,2.16,1,0.02,">1 nonsynonymous","V37R L57Y V153Y",3
"lib1","SARS-CoV-2","ACGCGCCTTAGCATAC",4,0.43,NA,NA,NA,NA,NA,NA,"stop","I80Q Y119* N151D",3
"lib1","SARS-CoV-2","ACGCGCGAAAAAGTAT",2,29.51,9.26,-1.5,0.11,2.77,1.13,0,">1 nonsynonymous","I2N F62V G117I",3
"lib1","SARS-CoV-2","ACGCGCGACTGATATA",2,15.55,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","K94F C150Y",2
"lib1","SARS-CoV-2","ACGCGGAATATACCCC",10,44.61,6.12,-4.64,0.89,1.5,1.3,0.02,">1 nonsynonymous","N1L D68E",2
"lib1","SARS-CoV-2","ACGCGGACACCCACAT",3,28.33,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","V77R L131E T170I",3
"lib1","SARS-CoV-2","ACGCGGACAGGCTGTA",1,42,10.3,-0.46,0.04,2.96,1,0,">1 nonsynonymous","L122Y E154A",2
"lib1","SARS-CoV-2","ACGCGGAGTCGTTGAC",1,7.09,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N120G C158A",2
"lib1","SARS-CoV-2","ACGCGGATAAGTCATT",3,71.01,8.77,-1.99,0.17,2.1,1.17,0.01,">1 nonsynonymous","Y123G G166V",2
"lib1","SARS-CoV-2","ACGCGGCTTGAGTCTA",3,21.87,8.38,-2.38,0.23,1.5,1.14,0.03,">1 nonsynonymous","F17K K87L T148M T201G",4
"lib1","SARS-CoV-2","ACGCGGGAACAAGTGA",1,5.62,10.76,0,0.1,2.98,1,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","ACGCGGGATACATAAA",5,47.29,10.37,-0.39,0.06,2.92,1.03,0,">1 nonsynonymous","N30W K128D A190R",3
"lib1","SARS-CoV-2","ACGCGGTAAACCGTAT",5,144.41,8.36,-2.4,0.19,2.41,1.12,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","ACGCGGTCAAGAGACG",2,85.53,10.82,0.05,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCGGTCTAAACTCG",2,34.8,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N1V V37E I80S A145L",4
"lib1","SARS-CoV-2","ACGCGTAACCACACCC",4,46.54,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F99C F134G Y175S",3
"lib1","SARS-CoV-2","ACGCGTAATCCGGAGG",5,34.79,10.63,-0.13,0.03,2.93,1.03,0,">1 nonsynonymous","C61K T85M T201A",3
"lib1","SARS-CoV-2","ACGCGTACACCGCATC",4,32.75,10.18,-0.59,0.07,2.96,1.04,0,">1 nonsynonymous","C61S K87S",2
"lib1","SARS-CoV-2","ACGCGTATCCACGTAT",7,41.58,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9N L162P",2
"lib1","SARS-CoV-2","ACGCGTCAAGGCATCT",10,2.58,NA,NA,NA,NA,NA,NA,"stop","N107W V182*",2
"lib1","SARS-CoV-2","ACGCGTCCAAAACCCT",6,28.27,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","L60Y P82I T85R W106P S129H E141R L162R",7
"lib1","SARS-CoV-2","ACGCGTGAAACCCTTT",1,10.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3K T63N Y175E V182R",4
"lib1","SARS-CoV-2","ACGCGTGGAAAGTGAT",2,28.45,10.67,-0.1,0.1,2.88,1.06,0,"1 nonsynonymous","A33F",1
"lib1","SARS-CoV-2","ACGCGTTAGTATGTAT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","C6F D97H F126* K199W",4
"lib1","SARS-CoV-2","ACGCGTTGATATGTAG",9,32.96,10.91,0.14,0.13,2.89,1,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ACGCTAAAATAAAATG",2,18.9,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","F8P I138L R179G",3
"lib1","SARS-CoV-2","ACGCTAAAGAAGATAC",20,113.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9S P96W Y121Q",3
"lib1","SARS-CoV-2","ACGCTAAAGGGGATCA",4,71.79,10.76,0,0.06,2.89,1.07,0,"1 nonsynonymous","L188V",1
"lib1","SARS-CoV-2","ACGCTAAATACTCAAA",6,61.73,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9F G86K N130V N157M Y175K",5
"lib1","SARS-CoV-2","ACGCTAACACGCACAA",5,106.54,NA,NA,NA,NA,NA,NA,"stop","P149C T201*",2
"lib1","SARS-CoV-2","ACGCTAACATCCTCGG",5,1.26,NA,NA,NA,NA,NA,NA,"stop","N30* S41T K48L V103K N120C K198S",6
"lib1","SARS-CoV-2","ACGCTAACCTCTAACA",9,58.69,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F12V Y39T Y50T V65R",4
"lib1","SARS-CoV-2","ACGCTAAGAATTCACA",4,54.51,6,-4.76,1.7,1.5,1.18,0.01,">1 nonsynonymous","V37E L57C T85I P133Y F156I K199I",6
"lib1","SARS-CoV-2","ACGCTAATATAAAGGT",5,8.18,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N1Q S43K D68G",3
"lib1","SARS-CoV-2","ACGCTACACACTGTCA",3,47.1,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y39P C102V C150V",3
"lib1","SARS-CoV-2","ACGCTACACCCTACGT",3,55.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N120E F156L Q176P",3
"lib1","SARS-CoV-2","ACGCTACACGAGCCAT",4,71.53,9.89,-0.87,0.07,2.44,1.01,0,">1 nonsynonymous","T15C A42D N171I",3
"lib1","SARS-CoV-2","ACGCTACATATTCGGG",4,32.13,8.03,-2.74,0.19,1.81,1.15,0.01,">1 nonsynonymous","T3D A14D S41L Y119L",4
"lib1","SARS-CoV-2","ACGCTACCACATTGGA",3,36.42,8.94,-1.82,0.09,2.66,1.15,0,">1 nonsynonymous","F8Y G146R",2
"lib1","SARS-CoV-2","ACGCTACGGTAGATAT",4,69.52,10.67,-0.09,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTACTAATTGAGT",4,59.78,6.05,-4.71,0.85,1.5,1.17,0.01,">1 nonsynonymous","A14M F44S G83D Y143R",4
"lib1","SARS-CoV-2","ACGCTACTTTTTATAA",7,44.52,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W106P N151S",2
"lib1","SARS-CoV-2","ACGCTAGACACAAGTA",7,125.23,10.5,-0.27,0.03,2.9,1.03,0,">1 nonsynonymous","D97I G116L N171M",3
"lib1","SARS-CoV-2","ACGCTAGCGTCTAGCA",6,73.2,8.7,-2.06,0.23,1.5,1.06,0.02,">1 nonsynonymous","L5S R16E R25C Y39M N109V",5
"lib1","SARS-CoV-2","ACGCTATAAAGTTTAT",3,20.98,10.08,-0.68,0.13,2.43,1,0.01,">1 nonsynonymous","D34N N107G S129T",3
"lib1","SARS-CoV-2","ACGCTATAATTCCAAC",3,10.33,10.64,-0.12,0.15,2.89,1.13,0.01,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","ACGCTATAGGGTTAAG",1,18.88,10.64,-0.12,0.13,2.93,1.03,0.01,">1 nonsynonymous","C61F E141D",2
"lib1","SARS-CoV-2","ACGCTATCACGATTTA",4,60.77,6,-4.76,1.19,1.5,1.13,0.01,">1 nonsynonymous","S29A A105H V115G F156N",4
"lib1","SARS-CoV-2","ACGCTATGCAACCAAG",2,61.29,10.67,-0.09,0.05,2.89,1.05,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","ACGCTATGCGTTTAAG",1,12.84,6.16,-4.6,1.12,3,1.21,0,">1 nonsynonymous","G74T N109M",2
"lib1","SARS-CoV-2","ACGCTATGTGAGCCAG",9,32.14,8.65,-2.12,0.16,1.5,1.14,0.01,">1 nonsynonymous","P96R I138P",2
"lib1","SARS-CoV-2","ACGCTATTAACGAAGC",2,21.46,10.79,0.02,0.06,2.91,1,0,">1 nonsynonymous","L5N T148V",2
"lib1","SARS-CoV-2","ACGCTATTATATCAAA",2,17.73,6.1,-4.66,0.59,1.5,1.04,0.02,">1 nonsynonymous","R27W L95P P149T G172L",4
"lib1","SARS-CoV-2","ACGCTCAAAACTTGAT",2,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F R127S",2
"lib1","SARS-CoV-2","ACGCTCAACACATCCA",1,45.17,9.96,-0.8,0.08,2.72,1.01,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","ACGCTCAAGAAAGATG",6,69.29,10.69,-0.07,0.12,2.75,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTCAATTCTTCCT",2,12.48,6,-4.76,2,3,1.08,0,">1 nonsynonymous","I72G T100D W106N",3
"lib1","SARS-CoV-2","ACGCTCACCTAAGAGT",2,20.26,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V11G S36R R136L L183Y",4
"lib1","SARS-CoV-2","ACGCTCAGCTACCCAT",4,148.1,10.69,-0.07,0.06,2.92,1.05,0,">1 nonsynonymous","Y35L A67L",2
"lib1","SARS-CoV-2","ACGCTCAGGACATTAC",3,17.05,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S41L C150P N157W",3
"lib1","SARS-CoV-2","ACGCTCATAATCAAAA",5,39.34,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39E F160D R179F P197T",4
"lib1","SARS-CoV-2","ACGCTCATACGGCGCA",2,22.61,7.54,-3.22,0.35,1.5,1.19,0.05,">1 nonsynonymous","K56C L122T S184P",3
"lib1","SARS-CoV-2","ACGCTCATTATTGAAG",4,43.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V182L T201S",2
"lib1","SARS-CoV-2","ACGCTCCCAAAACCGC",5,483.47,8.38,-2.38,0.12,2.38,1.12,0.01,">1 nonsynonymous","V115R N157Y",2
"lib1","SARS-CoV-2","ACGCTCCCTCAGCCAA",3,56.54,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G74L A89L T100A I138S",4
"lib1","SARS-CoV-2","ACGCTCCTACAGTAAA",19,329.12,10.74,-0.03,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTCGCACGTGCAA",2,9.28,10.78,0.01,0.13,2.92,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTCTATAACATAA",5,83.47,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N157L Y165W",2
"lib1","SARS-CoV-2","ACGCTCTCATGCAACC",11,33.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K C49E D68K P96Q T140F",5
"lib1","SARS-CoV-2","ACGCTGAAGACTTCGC",11,130.83,8.5,-2.27,0.12,1.96,1.15,0.01,">1 nonsynonymous","V37S D98L N107S F156M",4
"lib1","SARS-CoV-2","ACGCTGAATATATTAG",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S F62I P149H Q163Y",4
"lib1","SARS-CoV-2","ACGCTGAGGCATACCA",4,8.31,6.28,-4.49,0.85,1.5,1.16,0.06,">1 nonsynonymous","F17C F99K V182Y",3
"lib1","SARS-CoV-2","ACGCTGAGTATTATCC",2,17.61,10.81,0.04,0.1,2.96,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTGAGTCTGTGAA",5,82.1,10.83,0.07,0.1,2.9,1.03,0,">1 nonsynonymous","I2S P149A",2
"lib1","SARS-CoV-2","ACGCTGATGCTTGAAT",5,27.59,6.88,-3.89,0.26,1.54,1.16,0.02,">1 nonsynonymous","D59I F99L",2
"lib1","SARS-CoV-2","ACGCTGCATGAAAACA",2,11.24,6,-4.76,2,3,1.08,0,">1 nonsynonymous","V11L G86R S184E",3
"lib1","SARS-CoV-2","ACGCTGCATTACTCAG",4,69.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36P G74P",2
"lib1","SARS-CoV-2","ACGCTGCTATTTCCCT",7,83.08,10.38,-0.38,0.04,2.83,1.04,0,">1 nonsynonymous","S41D C102I",2
"lib1","SARS-CoV-2","ACGCTGGAAGCAATCA",6,27.71,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Y35D D90V E135V",3
"lib1","SARS-CoV-2","ACGCTGGCACTAATCG",10,134.89,10.64,-0.12,0.03,2.91,1.05,0,">1 nonsynonymous","S36Q F62Y T85V",3
"lib1","SARS-CoV-2","ACGCTGGGAACACGAT",6,41.69,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S19K P96F",2
"lib1","SARS-CoV-2","ACGCTGGTAAGACTAT",3,31.99,10.19,-0.57,0.06,2.83,1.09,0,">1 nonsynonymous","E10R G116P",2
"lib1","SARS-CoV-2","ACGCTGTAATTAGATA",1,115.81,9.65,-1.11,0.1,2,1.12,0,">1 nonsynonymous","K26M Y39N K56G W106Y",4
"lib1","SARS-CoV-2","ACGCTGTATTGGCTGG",3,26.5,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6L Y21G V37K F44C P82D P197S",6
"lib1","SARS-CoV-2","ACGCTTAAACGAGTAA",2,78.6,9.55,-1.22,0.05,2.88,1.07,0,">1 nonsynonymous","A18P C61G G116V Y119R",4
"lib1","SARS-CoV-2","ACGCTTAGAAATACTC",4,70.15,8.38,-2.38,0.1,2.77,1.06,0,">1 nonsynonymous","N107S L125E",2
"lib1","SARS-CoV-2","ACGCTTAGATATAACG",12,131.29,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F17V Y91Q F99R V181N",4
"lib1","SARS-CoV-2","ACGCTTAGCAAAACTG",4,2.18,NA,NA,NA,NA,NA,NA,"stop","V37L S41* P197E",3
"lib1","SARS-CoV-2","ACGCTTATAAGGGGCT",5,85.53,6,-4.76,0.8,1.5,1.13,0.01,">1 nonsynonymous","R124H F156Q",2
"lib1","SARS-CoV-2","ACGCTTATTAAGACGA",1,7.86,6,-4.76,2,3,1.05,0,">1 nonsynonymous","L5M E10F D68E P96W",4
"lib1","SARS-CoV-2","ACGCTTCCTATTCAAT",5,152.62,10.81,0.05,0.08,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGCTTCTGCCGCATA",13,113.8,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F17K Y35L F62S C158T",4
"lib1","SARS-CoV-2","ACGCTTGACCTCTTTG",10,2166.65,10.67,-0.1,0.03,2.92,1.02,0,">1 nonsynonymous","S43Q K56S K94A",3
"lib1","SARS-CoV-2","ACGCTTGTACAATAAC",2,26.12,8.92,-1.84,0.25,1.5,1.07,0.02,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","ACGCTTGTCCAAAATT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P D112F E186C",3
"lib1","SARS-CoV-2","ACGCTTTTTGAAAAAA",5,54.11,10.63,-0.14,0.06,2.94,1.04,0,">1 nonsynonymous","N64H T85E",2
"lib1","SARS-CoV-2","ACGGAAAAAGGTCTCG",7,9.09,NA,NA,NA,NA,NA,NA,"stop","Y119* N171L",2
"lib1","SARS-CoV-2","ACGGAAAAAGTCAGAC",2,29.73,10.51,-0.26,0.07,2.86,1,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","ACGGAAAACCAAAAGT",1,100.05,10.73,-0.03,0.06,2.93,1.04,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","ACGGAAAAGAAGCTGT",5,112.84,10.73,-0.03,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGAAAATTCTTTAG",4,101.34,9.34,-1.43,0.07,2.86,1.07,0,">1 nonsynonymous","N4G C61S Y143V",3
"lib1","SARS-CoV-2","ACGGAAACAAAATCAG",4,52.87,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N92A R124L F167N",3
"lib1","SARS-CoV-2","ACGGAAACTAACCTAT",2,61.92,9.9,-0.86,0.11,2.15,1.04,0,">1 nonsynonymous","L38V G83S N110L",3
"lib1","SARS-CoV-2","ACGGAAAGCGTGATGC",5,91.72,10.69,-0.07,0.11,2.83,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGGAAATATAAATAT",1,13.89,6.4,-4.36,0.16,3,1.07,0,">1 nonsynonymous","F12T N107P F134R",3
"lib1","SARS-CoV-2","ACGGAAATGATATGGC",4,52.54,6.55,-4.21,0.4,1.5,1.09,0.02,">1 nonsynonymous","Y91E V153W",2
"lib1","SARS-CoV-2","ACGGAAATTAACTAGA",1,59.35,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L95P N107R F167P P177M",4
"lib1","SARS-CoV-2","ACGGAACAAGAATATA",6,0.2,NA,NA,NA,NA,NA,NA,"stop","C49* G86C Y121V",3
"lib1","SARS-CoV-2","ACGGAACAATACTCCT",3,15.61,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N13S I28T L60F G86Y D112G",5
"lib1","SARS-CoV-2","ACGGAACACAAATGGA",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T A81D T140I",3
"lib1","SARS-CoV-2","ACGGAACAGATATTAA",10,135.28,10.76,-0.01,0.06,2.85,1.05,0,"1 nonsynonymous","R78H",1
"lib1","SARS-CoV-2","ACGGAACATAGTCACC",4,58.01,10.34,-0.43,0.2,2.52,1,0.02,">1 nonsynonymous","T63F A145G",2
"lib1","SARS-CoV-2","ACGGAACTAGTAAATG",14,56.01,9.49,-1.27,0.18,1.5,1.03,0.01,">1 nonsynonymous","C49A S129R",2
"lib1","SARS-CoV-2","ACGGAACTGATTTAAC",5,59.41,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","W23N N92Q A105S I138R",4
"lib1","SARS-CoV-2","ACGGAAGCACAATACG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","S29* N130L G166R",3
"lib1","SARS-CoV-2","ACGGAAGCACTGGGTT",4,29.11,6.22,-4.54,0.62,1.5,1.19,0.02,">1 nonsynonymous","D90S F99D S129R",3
"lib1","SARS-CoV-2","ACGGAAGCTAATTGAA",2,80.71,10.31,-0.45,0.07,2.9,1,0,">1 nonsynonymous","S45P A190L",2
"lib1","SARS-CoV-2","ACGGAAGTATGTGTGC",1,26.17,9.47,-1.3,0.06,2.88,1.07,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","ACGGAAGTGACACCTG",2,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F N120K P149S",3
"lib1","SARS-CoV-2","ACGGAATAAAATCCCC",15,90.82,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I2Y C61V K87N L95P Y143R T201R",6
"lib1","SARS-CoV-2","ACGGAATATCCCGACT",1,6.81,NA,NA,NA,NA,NA,NA,"stop","F17W T140*",2
"lib1","SARS-CoV-2","ACGGAATATTAGTTTA",2,24.23,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F44K A89N D90Y",3
"lib1","SARS-CoV-2","ACGGAATCAGTAAACG",1,19.56,10.26,-0.5,0.13,2.7,1,0.01,"1 nonsynonymous","Y93F",1
"lib1","SARS-CoV-2","ACGGAATCCGGGCGAA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40P F47S A105K L111S P133K",5
"lib1","SARS-CoV-2","ACGGAATTATACCCGG",6,194.28,9.43,-1.34,0.05,2.68,1.09,0,">1 nonsynonymous","R16A F44W G146R",3
"lib1","SARS-CoV-2","ACGGAATTTAGCAGGG",1,40.67,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F8L D112N N118T N157V G174F",5
"lib1","SARS-CoV-2","ACGGACAAAAATAAAT",2,62.2,10.84,0.07,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGACAAACCTTATA",2,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T P96G T201Q",3
"lib1","SARS-CoV-2","ACGGACAACACAGCCT",3,139.61,8.9,-1.87,0.06,2.86,1.13,0,">1 nonsynonymous","G9T K87T Y119H",3
"lib1","SARS-CoV-2","ACGGACAAGGCGAAAA",2,33.29,8.2,-2.56,0.23,1.68,1.22,0.02,">1 nonsynonymous","T3L A89S G146C V173I",4
"lib1","SARS-CoV-2","ACGGACAAGGTATAAA",4,2.37,NA,NA,NA,NA,NA,NA,"stop","T46* E141Y T148P",3
"lib1","SARS-CoV-2","ACGGACACCGGCTGTG",4,79.96,10.74,-0.03,0.07,2.89,1.07,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","ACGGACATGCATTCTT",17,84.23,6,-4.76,1.75,1.5,1.21,0.03,">1 nonsynonymous","G9S C102S",2
"lib1","SARS-CoV-2","ACGGACATGCGCAGAT",2,33.2,6,-4.76,1.97,3,1.13,0,">1 nonsynonymous","F99D Y119I R127N G174R P197A",5
"lib1","SARS-CoV-2","ACGGACCATCAAATAG",6,44.15,6.03,-4.73,1.08,1.5,1.15,0.02,">1 nonsynonymous","V20L L122F R127G",3
"lib1","SARS-CoV-2","ACGGACCCTTTTCATG",4,68.9,9.97,-0.79,0.11,2.17,1.07,0.01,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","ACGGACCGTGACAAAC",7,34.23,6,-4.76,2,2.2,1.27,0.01,">1 nonsynonymous","W23K C49R T55G C61E V71K A89F A105T",7
"lib1","SARS-CoV-2","ACGGACGCCTATCCGT",2,65.88,9.22,-1.55,0.32,1.5,1,0.05,">1 nonsynonymous","P7S K48P D98P A105W F156W",5
"lib1","SARS-CoV-2","ACGGACTACATATTTA",6,79.46,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V11L N120S C150F",3
"lib1","SARS-CoV-2","ACGGACTAGTAGCCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48P G83F L122V",3
"lib1","SARS-CoV-2","ACGGACTATACATTTA",1,16.67,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N4K T15S K114T Y123R F167A V181K",6
"lib1","SARS-CoV-2","ACGGACTGAGCATGGA",1,21.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q W106N K198L",3
"lib1","SARS-CoV-2","ACGGACTGGCTCAGCG",4,0.35,NA,NA,NA,NA,NA,NA,"stop","A14T V32F T55* P197D",4
"lib1","SARS-CoV-2","ACGGAGAAAGTTAAAA",9,160,9.74,-1.03,0.06,2.75,1.06,0,">1 nonsynonymous","T3Y G117Q N171T",3
"lib1","SARS-CoV-2","ACGGAGAAGAGGCTTA",3,50.96,10.33,-0.43,0.05,2.84,1.01,0,">1 nonsynonymous","S45Y F62C",2
"lib1","SARS-CoV-2","ACGGAGAATAAATGTT",6,29.12,8.89,-1.88,0.25,1.71,1.24,0.03,">1 nonsynonymous","D98I W106F Y143H",3
"lib1","SARS-CoV-2","ACGGAGACGAACCAGC",1,0.28,NA,NA,NA,NA,NA,NA,"stop","N4M E10C A14S G116* K128W G146T",6
"lib1","SARS-CoV-2","ACGGAGAGTCTGCGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95T F99* E154Q R179W",4
"lib1","SARS-CoV-2","ACGGAGATGCCGCCCT",11,148.47,10.64,-0.13,0.05,2.92,1.07,0,"1 nonsynonymous","K56I",1
"lib1","SARS-CoV-2","ACGGAGATGTGAGAGG",1,24.73,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28R S41C V103Q P133M",4
"lib1","SARS-CoV-2","ACGGAGCAAGCGGCAT",1,13.53,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L95T S129Y N157E Q163H G174E",5
"lib1","SARS-CoV-2","ACGGAGCATCAAAACC",4,24.78,6.25,-4.51,0.72,1.5,1.11,0.03,">1 nonsynonymous","F12R A42V R124S N130R",4
"lib1","SARS-CoV-2","ACGGAGCCCGAACATG",3,24.92,9.78,-0.99,0.16,1.5,1.07,0.02,">1 nonsynonymous","D137A A190L",2
"lib1","SARS-CoV-2","ACGGAGCGGGCACACT",4,92.67,6,-4.76,1.76,1.5,1.11,0.01,">1 nonsynonymous","C6W C49V T55A Q79R N118F T201S",6
"lib1","SARS-CoV-2","ACGGAGGATAAGCTAC",3,9.39,9.47,-1.29,0.32,1.52,1.13,0.05,">1 nonsynonymous","T3L T15Y A22T S53I K128T",5
"lib1","SARS-CoV-2","ACGGAGGCCGGGAATC",9,82.75,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K56N A89V W106N N157L V180S",5
"lib1","SARS-CoV-2","ACGGAGGTCATACAAC",8,136.42,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S41E Y66V K94V N120Y L131K",5
"lib1","SARS-CoV-2","ACGGAGGTTTACCAGT",2,10.93,6.54,-4.22,0.8,1.5,1.14,0.07,">1 nonsynonymous","A67P R136Q K199R",3
"lib1","SARS-CoV-2","ACGGAGTAAAGAGCAG",5,52.77,6.5,-4.26,0.58,1.5,1.13,0.04,">1 nonsynonymous","R16Y R25Q N64K K94Y",4
"lib1","SARS-CoV-2","ACGGAGTAACTCGTAC",3,12,10.59,-0.18,0.05,2.95,1.04,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","ACGGAGTAATCAATGA",10,160.68,10.74,-0.03,0.07,2.9,1.07,0,"1 nonsynonymous","A192S",1
"lib1","SARS-CoV-2","ACGGAGTCCCGCACAT",1,33.37,6,-4.76,1.79,1.5,1.25,0.03,">1 nonsynonymous","I138A V180F",2
"lib1","SARS-CoV-2","ACGGAGTGTGTCCGGT",10,187.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9T D112P N118T Q176R",4
"lib1","SARS-CoV-2","ACGGAGTTACTTTCGG",8,101.69,9.15,-1.61,0.11,1.71,1.13,0.01,"1 nonsynonymous","V71S",1
"lib1","SARS-CoV-2","ACGGAGTTATAGTAGT",3,18.61,9.1,-1.66,0.11,2.23,1.12,0,">1 nonsynonymous","P7L F12V G174L",3
"lib1","SARS-CoV-2","ACGGATAAACTAACAG",5,127.1,10.13,-0.63,0.1,2.44,1.02,0,">1 nonsynonymous","G51T Q84K",2
"lib1","SARS-CoV-2","ACGGATAAACTTGGAG",6,55.62,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55V D68I N107P V153I",4
"lib1","SARS-CoV-2","ACGGATAAATATAACC",1,6.03,9.79,-0.97,0.37,2.34,1.04,0.03,">1 nonsynonymous","A42T P133V P149L",3
"lib1","SARS-CoV-2","ACGGATAACAAAGAGT",2,31.18,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F62G G86Y S113Y F167Y",4
"lib1","SARS-CoV-2","ACGGATAACATCAACA",7,83.42,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33C Y39M N92Y L122M E141V",5
"lib1","SARS-CoV-2","ACGGATAACCAAGAGA",7,35.93,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L5R F12K S53G K87L S113V",5
"lib1","SARS-CoV-2","ACGGATAACGAAAAGT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","N1* G51P N151T",3
"lib1","SARS-CoV-2","ACGGATAAGAAAGCTT",5,82.62,8.98,-1.78,0.08,2.49,1.13,0,">1 nonsynonymous","T15Q R27L P54I N171G",4
"lib1","SARS-CoV-2","ACGGATAATAAAATCG",3,105.82,8.62,-2.15,0.22,1.5,1.12,0.02,">1 nonsynonymous","V32K S41L L131A",3
"lib1","SARS-CoV-2","ACGGATACATAGAGTA",5,39.27,8.54,-2.22,0.11,2.78,1.07,0.01,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","ACGGATAGTCTAGAAA",4,61.57,8.6,-2.16,0.18,1.68,1.09,0.01,">1 nonsynonymous","G83K Y121T K128V",3
"lib1","SARS-CoV-2","ACGGATATGATAACTA",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73G I88S C102N P149I F156L",5
"lib1","SARS-CoV-2","ACGGATATGTATGACA",1,16.94,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","I80K N110E R136L Y165K",4
"lib1","SARS-CoV-2","ACGGATCATAAAAGGC",1,12.24,10.8,0.04,0.07,2.92,1.03,0,">1 nonsynonymous","R27V T148F",2
"lib1","SARS-CoV-2","ACGGATCTAATCGTGT",15,176.75,10.75,-0.01,0.06,2.84,1.09,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","ACGGATGACGAACAAT",6,28,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A89T C102F Y119H K128Y R136G V173F",6
"lib1","SARS-CoV-2","ACGGATGACGAATCGC",6,46.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25P G146Q",2
"lib1","SARS-CoV-2","ACGGATGCTAAAATGA",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L Y119K P161R",3
"lib1","SARS-CoV-2","ACGGATGTCACATATG",4,9.29,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","N40L T55C G83I I88R L95E N110S",6
"lib1","SARS-CoV-2","ACGGATTAATTGGATA",2,58.24,10.63,-0.14,0.08,2.91,1.06,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","ACGGATTAGAATTACT",4,1.65,NA,NA,NA,NA,NA,NA,"stop","Q79*",1
"lib1","SARS-CoV-2","ACGGATTATGAAATGA",1,21.12,10.21,-0.55,0.17,2.65,1.03,0.02,"1 nonsynonymous","T15W",1
"lib1","SARS-CoV-2","ACGGATTATGATTCAT",4,31.79,8.89,-1.87,0.11,1.92,1.08,0.01,">1 nonsynonymous","R78D D137F",2
"lib1","SARS-CoV-2","ACGGATTCCATCTACT",11,40.89,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11Y K56S Y91D T170R",4
"lib1","SARS-CoV-2","ACGGATTGATGGCGAT",1,42.77,7.47,-3.29,0.32,1.5,1.23,0.03,">1 nonsynonymous","V11C R136T",2
"lib1","SARS-CoV-2","ACGGCAAACTAAGTGT",2,24.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I2F E10Q L95M Y119L F167S",5
"lib1","SARS-CoV-2","ACGGCAAATAATACAT",2,50.59,10.22,-0.54,0.06,2.88,1.01,0,">1 nonsynonymous","K26Q Q84N",2
"lib1","SARS-CoV-2","ACGGCAACAACAAACC",1,0.45,NA,NA,NA,NA,NA,NA,"stop","V11D S29V G51* Y91L Y123V Q163L",6
"lib1","SARS-CoV-2","ACGGCAACCTCCACAA",9,93.99,8.45,-2.32,0.22,1.5,1.04,0.02,">1 nonsynonymous","N4S R25K S139A",3
"lib1","SARS-CoV-2","ACGGCAACGCGAAATG",3,41.78,10.77,0.01,0.07,2.92,1.06,0,"1 nonsynonymous","K199I",1
"lib1","SARS-CoV-2","ACGGCAAGCACGTTCT",3,31.56,10.64,-0.13,0.08,2.89,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGCAATGGAGTAAG",2,52.11,6.25,-4.51,0.61,1.5,1.16,0.01,"1 nonsynonymous","I72N",1
"lib1","SARS-CoV-2","ACGGCAATGTTTCAGA",10,130.43,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68M Y143F N171R K198G",4
"lib1","SARS-CoV-2","ACGGCACAAGGACTTG",3,29.24,10.77,0.01,0.09,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGGCACAAGGCATTA",3,110.83,10.12,-0.65,0.08,2.54,1.04,0,">1 nonsynonymous","K26R Q84F I138Q",3
"lib1","SARS-CoV-2","ACGGCACACATGTCAG",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80R R136T",2
"lib1","SARS-CoV-2","ACGGCACCCATTCCAA",2,34.51,6.4,-4.36,0.79,1.5,1.25,0.03,">1 nonsynonymous","F44K V52S G152K",3
"lib1","SARS-CoV-2","ACGGCACTAACGCAGT",3,304.37,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","P7L V52T A89S G166L G172R",5
"lib1","SARS-CoV-2","ACGGCACTTCCACTGA",6,34.88,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","G101L Q144A V182K",3
"lib1","SARS-CoV-2","ACGGCAGGTTCGAATG",16,473.57,10.21,-0.56,0.04,2.91,1,0,">1 nonsynonymous","F44Y C61A F126L T148M",4
"lib1","SARS-CoV-2","ACGGCAGTGTTCAAAA",1,13.12,9.75,-1.01,0.18,1.87,1.14,0.01,">1 nonsynonymous","D34I K56M L131M",3
"lib1","SARS-CoV-2","ACGGCATAATTGCGCA",9,100.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37Q K48Q L95T G101L",4
"lib1","SARS-CoV-2","ACGGCATAATTTAAAA",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L N118T",2
"lib1","SARS-CoV-2","ACGGCATAGTGGAGGT",7,75.77,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D59W A81V Y93S",3
"lib1","SARS-CoV-2","ACGGCATTGAAGCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T Y35T C61F G86W G116L E135M I142S T148A C150R",9
"lib1","SARS-CoV-2","ACGGCATTGCTACTAT",8,1.01,NA,NA,NA,NA,NA,NA,"stop","Y39* Q84R T148V L188Q",4
"lib1","SARS-CoV-2","ACGGCCAAACATCTGA",2,81.82,8.43,-2.34,0.14,2.2,1.18,0.01,">1 nonsynonymous","D97Y Q176S",2
"lib1","SARS-CoV-2","ACGGCCAATTAGTTAA",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K N110I C150S T170R V182A",5
"lib1","SARS-CoV-2","ACGGCCATCCCACGTG",1,0.93,NA,NA,NA,NA,NA,NA,"stop","S41* L125K P149G",3
"lib1","SARS-CoV-2","ACGGCCCAATATGAAA",7,124.02,10.71,-0.05,0.07,2.87,1.05,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","ACGGCCGACGGTATTT",2,62.71,8.66,-2.11,0.11,2.96,1.04,0,">1 nonsynonymous","R78Q D98S Y159I P197L",4
"lib1","SARS-CoV-2","ACGGCCGATTGTGGAA",5,61.34,6,-4.76,1.05,1.5,1.2,0.01,">1 nonsynonymous","I2N V71C I88G S113F",4
"lib1","SARS-CoV-2","ACGGCCGGAGGCGGTC",1,12.12,10.18,-0.59,0.17,2.41,1.08,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ACGGCCGTCTATCAAA",4,0.89,NA,NA,NA,NA,NA,NA,"stop","I2S N13* L95G V103N",4
"lib1","SARS-CoV-2","ACGGCGACAAATGAGC",2,46.91,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9R A22W R27P G83V K114S",5
"lib1","SARS-CoV-2","ACGGCGATACAGAGGC",7,55.14,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L60C F99Q",2
"lib1","SARS-CoV-2","ACGGCGATATGAACTT",1,6.92,NA,NA,NA,NA,NA,NA,"stop","C102R S113* I138S",3
"lib1","SARS-CoV-2","ACGGCGCAAAAAATCT",12,163.94,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S19R Q144R N151S G155V",4
"lib1","SARS-CoV-2","ACGGCGCGGCTATCGG",9,179.35,10.74,-0.02,0.04,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGCGGTAAATCATA",8,139.96,10.57,-0.19,0.03,2.91,1.06,0,"1 nonsynonymous","Q79E",1
"lib1","SARS-CoV-2","ACGGCGGTCAGCTTCA",13,41.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N F44C I104K T140K",4
"lib1","SARS-CoV-2","ACGGCGTATACACGAC",5,108.04,10.24,-0.53,0.05,2.92,1,0,"1 nonsynonymous","Y91W",1
"lib1","SARS-CoV-2","ACGGCTAAAGATGCTT",1,13.54,9.65,-1.11,0.2,2.18,1.13,0.01,">1 nonsynonymous","A33G A42F Y91I",3
"lib1","SARS-CoV-2","ACGGCTAAATCAGCAA",12,136.33,10.81,0.05,0.06,2.89,1.05,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","ACGGCTAAGGAAACTA",3,53.59,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","N24C S53M L60P P96N F156V",5
"lib1","SARS-CoV-2","ACGGCTAGAATAGAGT",2,14.29,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","G51Y D68R I104F Y178N",4
"lib1","SARS-CoV-2","ACGGCTATGCATCTGC",1,0.42,NA,NA,NA,NA,NA,NA,"stop","W106* Y119A F134P Q168P",4
"lib1","SARS-CoV-2","ACGGCTCGACGCCTAA",6,65.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57K W106L I138V K198S",4
"lib1","SARS-CoV-2","ACGGCTCTATGCAACC",4,72.81,10.09,-0.67,0.06,2.81,1.01,0,">1 nonsynonymous","K132N G155C",2
"lib1","SARS-CoV-2","ACGGCTGAATCACCAA",11,33.11,6.44,-4.33,0.27,1.54,1.09,0.01,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","ACGGCTGATAAGGATG",8,164.85,10.21,-0.55,0.05,2.66,1.01,0,"1 nonsynonymous","V180L",1
"lib1","SARS-CoV-2","ACGGCTGTCATGACAC",4,15.21,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G101S N107G",2
"lib1","SARS-CoV-2","ACGGCTTAATCGGCAA",2,32.12,6,-4.76,1.64,1.5,1.12,0.02,">1 nonsynonymous","F134C L162G",2
"lib1","SARS-CoV-2","ACGGCTTACAAGTACA",6,55.43,10.78,0.01,0.08,2.92,1.03,0,">1 nonsynonymous","T3E D97L",2
"lib1","SARS-CoV-2","ACGGGAAACGCAGACA",3,22.93,6,-4.76,2,3,1.11,0,">1 nonsynonymous","V37T A81S P96R S184K",4
"lib1","SARS-CoV-2","ACGGGAAATCTTGAAT",2,46.01,10.22,-0.54,0.05,2.82,1.03,0,">1 nonsynonymous","E10A T46D T63A",3
"lib1","SARS-CoV-2","ACGGGAAGTTATTTCA",9,36.07,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","G101R P133T P149S",3
"lib1","SARS-CoV-2","ACGGGAATACACAAGT",3,31.37,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96W P133Y S184T",3
"lib1","SARS-CoV-2","ACGGGACATATATTAA",4,23.92,6.02,-4.74,0.93,1.5,1.15,0.02,">1 nonsynonymous","I104N N118D Q176L",3
"lib1","SARS-CoV-2","ACGGGACCGAACGGAC",3,0.18,NA,NA,NA,NA,NA,NA,"stop","W23R F62C S69* D97V Y119L E135R",6
"lib1","SARS-CoV-2","ACGGGACGAAACCCGC",5,13.26,8.14,-2.62,0.39,1.5,1,0.08,">1 nonsynonymous","N1Y K56N F99H",3
"lib1","SARS-CoV-2","ACGGGAGGTGTTCCCG",3,91.52,10.8,0.03,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGGAGTTTAGTTAG",2,63.47,10.71,-0.06,0.05,2.91,1.05,0,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","ACGGGAGTTTCGGTTA",6,1.49,NA,NA,NA,NA,NA,NA,"stop","N1* N120W F160L",3
"lib1","SARS-CoV-2","ACGGGATACATGGGAT",1,28.26,10.6,-0.17,0.06,2.93,1,0,">1 nonsynonymous","T55G F62V N120F",3
"lib1","SARS-CoV-2","ACGGGATAGACTACTA",6,162.06,9.9,-0.87,0.06,2.77,1.05,0,"1 nonsynonymous","P169D",1
"lib1","SARS-CoV-2","ACGGGATAGTAACCAG",3,27.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K V37T Y91R G155L",4
"lib1","SARS-CoV-2","ACGGGATCAAATATAC",12,246.31,10.72,-0.04,0.05,2.85,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGGGATCCTTTGACA",2,14.7,10.73,-0.04,0.13,2.78,1.15,0.02,"1 nonsynonymous","A192V",1
"lib1","SARS-CoV-2","ACGGGATCGCAATGGG",4,78.07,10.7,-0.06,0.05,2.9,1.07,0,">1 nonsynonymous","G9Y I142L",2
"lib1","SARS-CoV-2","ACGGGATGATGATACT",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S Y91T T170Y",3
"lib1","SARS-CoV-2","ACGGGATGCACCTGTG",3,35.54,6.52,-4.24,0.56,1.5,1.17,0.03,">1 nonsynonymous","W23Q S139Y",2
"lib1","SARS-CoV-2","ACGGGATGGCTATGTA",4,62.2,10.46,-0.31,0.05,2.85,1.07,0,">1 nonsynonymous","A42Y T148I",2
"lib1","SARS-CoV-2","ACGGGATTTCTTATAT",2,94.82,10.69,-0.07,0.06,2.94,1.03,0,"1 nonsynonymous","N1P",1
"lib1","SARS-CoV-2","ACGGGCAAGATACTCG",2,7.9,10.37,-0.4,0.09,2.9,1.05,0,"1 nonsynonymous","S69M",1
"lib1","SARS-CoV-2","ACGGGCAATTCTCCAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","F62R I88*",2
"lib1","SARS-CoV-2","ACGGGCACTTCGAACT",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57P G101C",2
"lib1","SARS-CoV-2","ACGGGCAGCGCGCACG",8,63.73,6.02,-4.75,0.99,1.5,1.18,0.02,">1 nonsynonymous","N1F Y39L G86A Y91I",4
"lib1","SARS-CoV-2","ACGGGCATGCAATTGC",6,29.4,10.67,-0.09,0.06,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGGGCATTAACCAAA",3,59.72,8.01,-2.76,0.49,1.5,1.14,0.07,">1 nonsynonymous","N4L F12C R27Q Y66T A192R",5
"lib1","SARS-CoV-2","ACGGGCCACTATACAT",9,49.47,9.75,-1.02,0.09,2.34,1.04,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","ACGGGCCATTTTTGCA",5,39.17,9.33,-1.43,0.09,2.9,1.09,0,">1 nonsynonymous","S129T Y143V",2
"lib1","SARS-CoV-2","ACGGGCGGTGCAAACG",8,46.77,8.35,-2.42,0.24,1.5,1.05,0.02,">1 nonsynonymous","K56T D137G",2
"lib1","SARS-CoV-2","ACGGGCTAACTGCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G Q168R",2
"lib1","SARS-CoV-2","ACGGGCTAGGAGCTAT",7,145.25,10.66,-0.1,0.04,2.92,1.03,0,">1 nonsynonymous","I2F K114E",2
"lib1","SARS-CoV-2","ACGGGGATAAGAATTA",1,28.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6G E10V D68M F99G",4
"lib1","SARS-CoV-2","ACGGGGATGTGCGGAC",4,68.64,7.14,-3.63,0.35,1.5,1.26,0.03,">1 nonsynonymous","V115S R127T",2
"lib1","SARS-CoV-2","ACGGGGCGAATAAAGT",2,34.52,6.27,-4.5,0.81,1.5,1.2,0.02,">1 nonsynonymous","L95M E135P P191Y",3
"lib1","SARS-CoV-2","ACGGGGCGGTGCCCGA",20,308.76,9.93,-0.83,0.07,1.96,1.04,0,">1 nonsynonymous","Y50T T55G K198Q",3
"lib1","SARS-CoV-2","ACGGGGGGAATACTGA",1,21.75,10.76,0,0.09,2.89,1.05,0,"1 nonsynonymous","T140D",1
"lib1","SARS-CoV-2","ACGGGTAAAATTCGCG",7,77.35,6.21,-4.56,0.5,1.5,1.17,0.01,">1 nonsynonymous","T63G N107W N109T L122S",4
"lib1","SARS-CoV-2","ACGGGTACACCGATAC",1,53.2,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V32R K87Q Y143N F160C",4
"lib1","SARS-CoV-2","ACGGGTACTGTCGCGT",2,9.28,6,-4.76,2,3,1.11,0.02,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","ACGGGTCAACATGTGA",4,29.55,9.74,-1.02,0.11,2.89,1.08,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","ACGGGTCTTTCTACTA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","G86C Y91* Q163T",3
"lib1","SARS-CoV-2","ACGGGTGCAAGGCGAA",1,24.06,8.25,-2.51,0.15,2.22,1.17,0.01,">1 nonsynonymous","P7S S113F",2
"lib1","SARS-CoV-2","ACGGGTGGGTTACATA",6,101.97,9.84,-0.93,0.1,2.18,1.1,0,">1 nonsynonymous","G9C N58F",2
"lib1","SARS-CoV-2","ACGGGTGTATTCACTT",2,46.28,10.6,-0.17,0.07,2.89,1.09,0,">1 nonsynonymous","C61S K198A",2
"lib1","SARS-CoV-2","ACGGGTGTCGTACAAC",1,99.22,10.66,-0.1,0.05,2.95,1.05,0,">1 nonsynonymous","Y35L A42I S184G",3
"lib1","SARS-CoV-2","ACGGGTGTCTGGTATT",1,5.23,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","G9T A89M G101S C158W",4
"lib1","SARS-CoV-2","ACGGTAAAACTATTAT",8,136.15,6.09,-4.68,0.62,1.5,1.13,0.01,">1 nonsynonymous","S45F P82L D97R T140K P177C",5
"lib1","SARS-CoV-2","ACGGTAAAACTCCCGA",5,15.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37L G101H",2
"lib1","SARS-CoV-2","ACGGTAAACCAGAGGT",4,53.06,10.36,-0.41,0.09,2.87,1.04,0.01,">1 nonsynonymous","R27E I104C L122V",3
"lib1","SARS-CoV-2","ACGGTAAAGGCATAGG",1,14.53,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A18R C49M Y66I",3
"lib1","SARS-CoV-2","ACGGTAAATTTGTACC",5,90.16,6.47,-4.3,0.34,1.5,1.16,0.01,">1 nonsynonymous","C6I Y39E V52L N64Q Q79T N171Y",6
"lib1","SARS-CoV-2","ACGGTAACTAGACCCT",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55E K94T V103K",3
"lib1","SARS-CoV-2","ACGGTAACTATTTTAG",3,23.02,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I2N G9F V71K H189F",4
"lib1","SARS-CoV-2","ACGGTAATAATAGCTT",6,51.72,7.54,-3.22,0.09,1.87,1.05,0,">1 nonsynonymous","R78C S139P S184T",3
"lib1","SARS-CoV-2","ACGGTACCCGCAAAAA",7,41.42,8.96,-1.8,0.35,1.5,1,0.05,">1 nonsynonymous","C49V N107D",2
"lib1","SARS-CoV-2","ACGGTACGAACATAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N Y39H K87M K94Q G166V",5
"lib1","SARS-CoV-2","ACGGTACGAACTTATT",1,81.82,9.86,-0.9,0.11,2.3,1.05,0,">1 nonsynonymous","N24Y L60F R78D D90N K114L",5
"lib1","SARS-CoV-2","ACGGTACGTAGAAATC",3,50.85,10.83,0.07,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGTACGTTGATACT",14,3169.88,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","V65F G74V S164F G174T K198N",5
"lib1","SARS-CoV-2","ACGGTACTAAGCAGAT",3,24.19,6.44,-4.32,0.66,1.5,1.23,0.03,">1 nonsynonymous","A42L K48M D68G V77G W106L",5
"lib1","SARS-CoV-2","ACGGTACTCTTAGACC",2,117.02,10.17,-0.59,0.05,2.78,1.05,0,">1 nonsynonymous","N4H D59I",2
"lib1","SARS-CoV-2","ACGGTAGATACAAGCC",2,33.52,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I2D A81Q L95W F134K K198R",5
"lib1","SARS-CoV-2","ACGGTAGGCAAAATCT",13,101.77,6,-4.76,1.03,1.5,1.17,0.01,">1 nonsynonymous","Y93S K128W",2
"lib1","SARS-CoV-2","ACGGTATAAAAGAGGG",7,133.46,10.78,0.02,0.06,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGGTATAATGACCCA",3,64.83,9.66,-1.1,0.18,1.89,1.08,0.01,">1 nonsynonymous","I2N E76R V173L",3
"lib1","SARS-CoV-2","ACGGTATACCACTAGT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","V20G R124V F167* S184Y",4
"lib1","SARS-CoV-2","ACGGTATAGGGCCACA",2,13.01,10.71,-0.05,0.31,2.34,1.02,0.05,">1 nonsynonymous","K48S I72L",2
"lib1","SARS-CoV-2","ACGGTATCTCACGTAT",4,134.72,8.34,-2.42,0.13,2.41,1.09,0.01,">1 nonsynonymous","F44W N64D F156I Q176S",4
"lib1","SARS-CoV-2","ACGGTATTCTCCATAC",3,69.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5G Y39L T85L V103W",4
"lib1","SARS-CoV-2","ACGGTATTGAATTGAA",5,7.27,9.77,-1,0.15,2.24,1.04,0.01,">1 nonsynonymous","F8C G152N",2
"lib1","SARS-CoV-2","ACGGTATTGTGCTAAT",11,9.97,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib1","SARS-CoV-2","ACGGTCACAACAGCTG",4,150.55,10.2,-0.56,0.05,2.76,1.02,0,">1 nonsynonymous","V153F Y178S",2
"lib1","SARS-CoV-2","ACGGTCACCAAATTAA",13,105.96,8.81,-1.95,0.2,1.5,1.19,0.02,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","ACGGTCAGAGCAACCC",3,58.44,8.75,-2.01,0.12,1.69,1.17,0.01,">1 nonsynonymous","P161S V173S",2
"lib1","SARS-CoV-2","ACGGTCATATAAAGCT",1,19.27,8.82,-1.94,0.16,1.83,1.18,0.02,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","ACGGTCCGGTCGGCTA",1,13.55,10.85,0.08,0.15,2.86,1.01,0.01,"1 nonsynonymous","S113A",1
"lib1","SARS-CoV-2","ACGGTCCTAGAAGACA",2,45.39,6.79,-3.98,0.32,1.5,1.17,0.01,"1 nonsynonymous","Y175P",1
"lib1","SARS-CoV-2","ACGGTCCTAGCATGGA",3,82.86,10.15,-0.62,0.09,2.68,1.02,0,">1 nonsynonymous","L57V N120S",2
"lib1","SARS-CoV-2","ACGGTCCTCCGGGGAA",2,77.54,6,-4.76,1.21,1.5,1.17,0.02,">1 nonsynonymous","T3K K132L C150R",3
"lib1","SARS-CoV-2","ACGGTCGACAGCATGG",2,16.41,6,-4.76,0.64,3,1.08,0.01,">1 nonsynonymous","V11Q W106A E186N",3
"lib1","SARS-CoV-2","ACGGTCGAGACATAAT",2,57.2,10.86,0.1,0.06,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGGTCGCAGTAAGCT",1,9.83,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","K87D Y93N V103W S139W P149L",5
"lib1","SARS-CoV-2","ACGGTCGCGGACCATG",11,5.87,NA,NA,NA,NA,NA,NA,"stop","K48V L95S Q144*",3
"lib1","SARS-CoV-2","ACGGTCTATAGGACAT",4,22.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39T G86L Y119V",3
"lib1","SARS-CoV-2","ACGGTCTCCGCACCCT",2,0.87,NA,NA,NA,NA,NA,NA,"stop","P82* N120I V173Y",3
"lib1","SARS-CoV-2","ACGGTCTTTTAAGAAG",5,24.02,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","D68E Y119V P133L",3
"lib1","SARS-CoV-2","ACGGTGAAAGAATCGC",4,14.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N13M P96V Q144D H189I",4
"lib1","SARS-CoV-2","ACGGTGAATTCCGCAA",9,189.01,10.02,-0.75,0.04,2.83,1,0,">1 nonsynonymous","G9L T46L G155S",3
"lib1","SARS-CoV-2","ACGGTGACTAAAGCTG",5,82.21,9.25,-1.51,0.12,1.7,1.16,0.01,">1 nonsynonymous","T3V L38R S147N Q163N",4
"lib1","SARS-CoV-2","ACGGTGAGAGACCGCA",10,79.39,7.73,-3.03,0.31,1.5,1.17,0.03,">1 nonsynonymous","I80V Q84W T170F S184K",4
"lib1","SARS-CoV-2","ACGGTGAGGCGGGCCT",2,44.47,10.09,-0.68,0.1,2.75,1.01,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","ACGGTGATACCACCGG",4,5.43,NA,NA,NA,NA,NA,NA,"stop","A33S V71* L131M T140L",4
"lib1","SARS-CoV-2","ACGGTGCTACAAGGTT",4,50.1,10.53,-0.23,0.08,2.87,1.07,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","ACGGTGCTTTCGATTT",2,14.37,8.47,-2.29,0.17,1.85,1.12,0.01,">1 nonsynonymous","N40H Y165R",2
"lib1","SARS-CoV-2","ACGGTGGAATGCAAAT",2,20.18,9.91,-0.86,0.06,2.6,1.08,0,">1 nonsynonymous","L60G Q84H T140E",3
"lib1","SARS-CoV-2","ACGGTGGCAAGATACA",2,21.42,9.95,-0.81,0.05,2.8,1.05,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","ACGGTGGCCTAACGTT",3,53.78,10.85,0.08,0.06,2.85,1.03,0,"1 nonsynonymous","V153N",1
"lib1","SARS-CoV-2","ACGGTGGTAACCCTGT",9,131.84,10.77,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","S200R",1
"lib1","SARS-CoV-2","ACGGTGGTGACAAAAT",4,2.22,NA,NA,NA,NA,NA,NA,"stop","V11D T46* A81K N118S F134N G146L",6
"lib1","SARS-CoV-2","ACGGTGTCCACTGATA",4,184.63,10.62,-0.15,0.04,2.89,1.04,0,">1 nonsynonymous","C61V S129A Q168A",3
"lib1","SARS-CoV-2","ACGGTGTCCTATACAA",1,809.34,9.34,-1.43,0.09,2.37,1.08,0,">1 nonsynonymous","G116T G146W T201W",3
"lib1","SARS-CoV-2","ACGGTGTGCACTATTG",4,11.87,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P7A A22R V52H L57A Y91H D98Y",6
"lib1","SARS-CoV-2","ACGGTTAAACCCCAAG",8,231.04,10.7,-0.07,0.06,2.89,1.08,0,"1 nonsynonymous","C61H",1
"lib1","SARS-CoV-2","ACGGTTAAAGAGTACG",3,41.82,9.99,-0.77,0.09,2.14,1.08,0,">1 nonsynonymous","P7L S36W P149F",3
"lib1","SARS-CoV-2","ACGGTTAATTAACCAG",8,111.91,9.76,-1,0.1,1.98,1.03,0.01,"1 nonsynonymous","A67G",1
"lib1","SARS-CoV-2","ACGGTTACACTCTATA",3,21.41,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S108P G152N N157A E186V",4
"lib1","SARS-CoV-2","ACGGTTACGAGAAGGC",3,17.68,6.02,-4.74,1.06,1.5,1.07,0.02,">1 nonsynonymous","C6D S19R C49N D59A N151V",5
"lib1","SARS-CoV-2","ACGGTTACGCTCCTCT",1,21.72,10.37,-0.4,0.11,2.8,1,0,">1 nonsynonymous","K26S L60W",2
"lib1","SARS-CoV-2","ACGGTTACTTCACACA",4,2.88,NA,NA,NA,NA,NA,NA,"stop","G9C G86K F167*",3
"lib1","SARS-CoV-2","ACGGTTATATTAATCT",3,16.97,10.03,-0.73,0.18,2.43,1,0.01,">1 nonsynonymous","G9M G116M T140G",3
"lib1","SARS-CoV-2","ACGGTTCACTTCCCTA",6,52.27,8.64,-2.12,0.11,3,1,0.01,">1 nonsynonymous","I2P N157K",2
"lib1","SARS-CoV-2","ACGGTTCCGACATCTA",6,108.37,9.99,-0.77,0.07,2.31,1.04,0,">1 nonsynonymous","P7C L57T I142V",3
"lib1","SARS-CoV-2","ACGGTTGCATCTCAAC",5,102.32,6,-4.76,1.76,1.5,1.1,0.01,">1 nonsynonymous","A18F T148G R179S",3
"lib1","SARS-CoV-2","ACGGTTGCCAAATCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8I V71K Y143E Q176*",4
"lib1","SARS-CoV-2","ACGGTTGCTTTGTTGC",2,44.93,10.03,-0.73,0.15,1.91,1.07,0.01,">1 nonsynonymous","F47N E141A",2
"lib1","SARS-CoV-2","ACGGTTGGGAGCGACT",4,32.18,9.88,-0.89,0.1,2.26,1.04,0,">1 nonsynonymous","C102V K128S T201W",3
"lib1","SARS-CoV-2","ACGGTTTACCGAATAT",6,101.6,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36M D68T G117I",3
"lib1","SARS-CoV-2","ACGGTTTAGTTTAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78H I104N N120D G166S Y175S",5
"lib1","SARS-CoV-2","ACGGTTTATTTAAGAG",8,18.43,10.47,-0.29,0.07,2.75,1.15,0,">1 nonsynonymous","L5A G174P K198Q",3
"lib1","SARS-CoV-2","ACGGTTTTGGCCCATC",1,19.72,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","L122T P133D C158R",3
"lib1","SARS-CoV-2","ACGTAAAAAGCGATTC",2,16.76,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37R S113W N120V G172I",4
"lib1","SARS-CoV-2","ACGTAAAAATATTCAA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29D V37T G152Y G166T",4
"lib1","SARS-CoV-2","ACGTAAAAGCTGAGCC",2,43.7,6.25,-4.52,0.97,1.5,1.12,0.05,">1 nonsynonymous","Y35L S45K G86L L122S G146E N171D Q176P",7
"lib1","SARS-CoV-2","ACGTAAACATTAGTCG",1,19.29,6.82,-3.95,0.56,1.5,1.09,0.05,">1 nonsynonymous","E10S D90C N157L S184R",4
"lib1","SARS-CoV-2","ACGTAAACGAAGCATA",5,17.57,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L95S Y121S",2
"lib1","SARS-CoV-2","ACGTAAACGACCAAAT",1,20.1,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S36M F99Q S108C R124H Y159M P169D",6
"lib1","SARS-CoV-2","ACGTAAACTATCAATA",13,57.33,8.96,-1.81,0.31,1.5,1.09,0.04,">1 nonsynonymous","P7V V65R S139N",3
"lib1","SARS-CoV-2","ACGTAAAGAGACGGTC",10,13.25,6.13,-4.64,1.32,1.5,1.23,0.04,">1 nonsynonymous","N4L G83F Y119W S139Y R179M S184V",6
"lib1","SARS-CoV-2","ACGTAAAGATAAGACC",7,185.92,8.89,-1.88,0.07,2.58,1.1,0,">1 nonsynonymous","C6V N109H T201V",3
"lib1","SARS-CoV-2","ACGTAAATAATTGTCC",4,11.73,10.16,-0.6,0.12,2.83,1.02,0.01,"1 nonsynonymous","Y66R",1
"lib1","SARS-CoV-2","ACGTAAATACCTGAAA",2,25.43,9.33,-1.43,0.18,1.7,1.09,0.01,">1 nonsynonymous","F47R C102L",2
"lib1","SARS-CoV-2","ACGTAAATCAAATTCA",4,96.71,10.76,-0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTAAATCACGATAC",4,76.9,10.71,-0.06,0.05,2.87,1.06,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","ACGTAAATCATTTCCC",2,54.36,10,-0.76,0.06,2.85,1.05,0,"1 nonsynonymous","N118H",1
"lib1","SARS-CoV-2","ACGTAAATCGAGTTTT",2,16.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86K Y93S F99S",3
"lib1","SARS-CoV-2","ACGTAAATCGTTCTAG",1,9.59,7.98,-2.79,0.32,2.47,1.25,0.02,">1 nonsynonymous","C6S A81V",2
"lib1","SARS-CoV-2","ACGTAAATTAATCCCT",2,12.06,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N4V L131P",2
"lib1","SARS-CoV-2","ACGTAAATTAGCAAAT",2,6.8,10,-0.77,0.1,2.91,1.01,0,"1 nonsynonymous","A145Q",1
"lib1","SARS-CoV-2","ACGTAAATTGCAATCC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","R27G K56L C102T N110E I142V N157*",6
"lib1","SARS-CoV-2","ACGTAACAATAGCAAA",1,54.5,10.75,-0.02,0.07,2.91,1.08,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","ACGTAACACTAAGCAC",2,27.19,6.18,-4.58,1.05,1.5,1.18,0.04,">1 nonsynonymous","Y21E Y178A",2
"lib1","SARS-CoV-2","ACGTAACAGGCACTTA",3,30.24,8.87,-1.89,0.14,2.37,1.12,0.01,">1 nonsynonymous","G51K N118I",2
"lib1","SARS-CoV-2","ACGTAACATAAATTCA",3,18.12,10.37,-0.39,0.13,2.77,1,0.01,">1 nonsynonymous","T3Y Q84H",2
"lib1","SARS-CoV-2","ACGTAACATGCTGGCA",7,9.78,NA,NA,NA,NA,NA,NA,"stop","C158*",1
"lib1","SARS-CoV-2","ACGTAACATTTGAAAC",6,39.37,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A14F K94T",2
"lib1","SARS-CoV-2","ACGTAACCACCCATTC",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49W L57R I104V",3
"lib1","SARS-CoV-2","ACGTAACCTATATAAC",2,6.9,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","R27P V37L F99L I142A",4
"lib1","SARS-CoV-2","ACGTAACTCATAGGAT",4,27.19,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N107F G117V",2
"lib1","SARS-CoV-2","ACGTAACTCCCGACTA",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A Y93I P197A",3
"lib1","SARS-CoV-2","ACGTAACTCTGAAAAA",4,40.98,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","P7N G83F P96T S139L",4
"lib1","SARS-CoV-2","ACGTAAGACAATTAAC",7,13.04,8.8,-1.97,0.27,1.5,1.09,0.04,">1 nonsynonymous","T3V V77E",2
"lib1","SARS-CoV-2","ACGTAAGCAGTAAGTA",5,61.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I K26S W106R",3
"lib1","SARS-CoV-2","ACGTAAGGCAGCGATA",5,116.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40F F62H R127H S164L",4
"lib1","SARS-CoV-2","ACGTAAGTGAACAGAG",7,182.02,10.63,-0.14,0.05,2.9,1.06,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","ACGTAATGAATAAATA",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W A81T T100S",3
"lib1","SARS-CoV-2","ACGTAATGCTATAATA",6,67.66,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38Q G83V D97N",3
"lib1","SARS-CoV-2","ACGTAATGTAGCTAGG",2,5.06,10.24,-0.52,0.08,2.89,1.07,0,">1 nonsynonymous","G83S Y121H T201A",3
"lib1","SARS-CoV-2","ACGTAATGTCAGCCTT",6,34.42,6.04,-4.72,1.24,1.5,1.19,0.03,">1 nonsynonymous","A33S G51V K94A S113E P161V",5
"lib1","SARS-CoV-2","ACGTAATTGACCCTAT",1,29.84,10.25,-0.51,0.12,2.76,1.02,0,">1 nonsynonymous","A81T Q168R",2
"lib1","SARS-CoV-2","ACGTACAAAAAAAGAC",4,0,NA,NA,NA,NA,NA,NA,"stop","N4F G51P V65I Y91* N118E",5
"lib1","SARS-CoV-2","ACGTACAAACTCCGAC",11,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V Y93T L125G P133V P149W T170Y",6
"lib1","SARS-CoV-2","ACGTACAAATTACACG",8,38.82,6,-4.76,1.99,1.5,1.21,0.03,">1 nonsynonymous","A89C R127L",2
"lib1","SARS-CoV-2","ACGTACAATACATTCC",5,109.92,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S19Y Y39I I142D F160T V173D",5
"lib1","SARS-CoV-2","ACGTACACTAGAGAAG",5,104.39,10.82,0.06,0.07,2.92,1.06,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","ACGTACAGAAACTTTA",4,11.68,6.52,-4.25,0.7,1.5,1.16,0.06,">1 nonsynonymous","A33T S69G V77D D90K",4
"lib1","SARS-CoV-2","ACGTACATTAAAGGTT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","F17C V37* S43I Y93R N120* Q163W V173K",7
"lib1","SARS-CoV-2","ACGTACCAAGGCCGCA",3,71.58,10.74,-0.02,0.04,2.89,1.07,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","ACGTACCACCACGGAT",4,155.44,9.98,-0.78,0.04,2.72,1.04,0,">1 nonsynonymous","I2M V37I Q144F",3
"lib1","SARS-CoV-2","ACGTACCAGACAAGGG",2,57.04,9.55,-1.21,0.13,1.61,1.2,0.01,">1 nonsynonymous","N40E E135L E141R",3
"lib1","SARS-CoV-2","ACGTACCGATAAAGCA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","P82W Y143*",2
"lib1","SARS-CoV-2","ACGTACCGCATGAAAC",10,34.79,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C31V V37M F99Y W106S L122Q Y143N F167W E186S K198R",9
"lib1","SARS-CoV-2","ACGTACCGCGCCCGTT",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R R127L D137R I142L",4
"lib1","SARS-CoV-2","ACGTACCGGCTCCTGT",1,25.2,10.11,-0.65,0.12,2.63,1.02,0.01,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","ACGTACCTACTCAAAC",1,77.39,9.8,-0.96,0.08,1.95,1.05,0,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","ACGTACCTGTAATCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39E R73E Y91*",3
"lib1","SARS-CoV-2","ACGTACCTTTTAAAGT",3,75.58,6.3,-4.47,0.47,1.5,1.21,0.01,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","ACGTACCTTTTTGCGG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","T46* A145C",2
"lib1","SARS-CoV-2","ACGTACGAAAGATTAA",3,62.03,10.82,0.06,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTACGACTTATCAT",6,92.09,10.55,-0.21,0.04,2.95,1,0,">1 nonsynonymous","P7R K87T T100L",3
"lib1","SARS-CoV-2","ACGTACGGTGAAGAAC",10,56.78,6.44,-4.32,0.67,1.5,1.21,0.04,">1 nonsynonymous","D68R L162M",2
"lib1","SARS-CoV-2","ACGTACGTCCTATCCC",2,36.13,8.6,-2.17,0.12,1.9,1.07,0.01,">1 nonsynonymous","N13V P169H",2
"lib1","SARS-CoV-2","ACGTACTGTAAATTAA",1,17.92,10.31,-0.45,0.15,2.75,1.12,0.01,">1 nonsynonymous","V37E G155R",2
"lib1","SARS-CoV-2","ACGTACTTAAAGTTAG",7,108.45,6,-4.76,0.75,1.5,1.17,0.01,">1 nonsynonymous","T100A D112I V153W K199L",4
"lib1","SARS-CoV-2","ACGTACTTGAACAGCA",1,43.09,10.16,-0.61,0.1,2.53,1.05,0,">1 nonsynonymous","K26R S41V L57K I72V",4
"lib1","SARS-CoV-2","ACGTACTTTATAGAGT",1,7.42,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I104R N151Q",2
"lib1","SARS-CoV-2","ACGTAGAACAACAGAC",2,35.25,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","T3S G101S",2
"lib1","SARS-CoV-2","ACGTAGAATTTAATAC",1,28.58,9.11,-1.65,0.12,2.37,1.15,0.01,">1 nonsynonymous","A42Q N107T F160Q",3
"lib1","SARS-CoV-2","ACGTAGACAAAACATC",3,73.29,10.82,0.05,0.07,2.89,1.04,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","ACGTAGAGCCTTAGAA",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","ACGTAGATGTTCTATT",5,108.01,9.56,-1.2,0.08,1.82,1.1,0,"1 nonsynonymous","G86A",1
"lib1","SARS-CoV-2","ACGTAGCAAACTACGG",7,144.31,10.43,-0.33,0.04,2.95,1.02,0,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","ACGTAGCAGGATTCAA",1,42.87,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68M G172E",2
"lib1","SARS-CoV-2","ACGTAGCCAAGGATCC",1,2.55,NA,NA,NA,NA,NA,NA,"stop","N13P T63I A81S Y165*",4
"lib1","SARS-CoV-2","ACGTAGCTAGTTTATT",4,70.39,10.75,-0.02,0.06,2.91,1.06,0,">1 nonsynonymous","L5R S53D",2
"lib1","SARS-CoV-2","ACGTAGGATCAAATTT",4,21.67,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V52C L57A N157V",3
"lib1","SARS-CoV-2","ACGTAGGCGAGACCAA",10,62.05,10.06,-0.71,0.09,2.27,1.06,0,">1 nonsynonymous","G83W F185L",2
"lib1","SARS-CoV-2","ACGTAGGCTTTCTTTC",15,196.56,10.05,-0.71,0.03,2.78,1.02,0,">1 nonsynonymous","A14S F134Y G155I",3
"lib1","SARS-CoV-2","ACGTAGTCGGGTTAAC",4,99.87,10.64,-0.12,0.06,2.87,1.08,0,">1 nonsynonymous","V32T K114M T201V",3
"lib1","SARS-CoV-2","ACGTAGTGCTAGTATC",4,38.61,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","T15W K48S A81T I142H",4
"lib1","SARS-CoV-2","ACGTATAAAACAGGTT",1,1.52,NA,NA,NA,NA,NA,NA,"stop","K48V D59T Y93C G116S F156* P177Y",6
"lib1","SARS-CoV-2","ACGTATAAAAGTCCAG",1,1.74,NA,NA,NA,NA,NA,NA,"stop","I104Y A192* T201N",3
"lib1","SARS-CoV-2","ACGTATAAACCCATTC",1,20.83,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","D90K C150N N157L",3
"lib1","SARS-CoV-2","ACGTATAAAGTCCGCC",2,78.29,8.19,-2.57,0.13,1.56,1.14,0.01,">1 nonsynonymous","E10G K56E N107L",3
"lib1","SARS-CoV-2","ACGTATAATGATAAAA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N V103N S139D",3
"lib1","SARS-CoV-2","ACGTATAGAATGCTGA",1,14.67,9.28,-1.49,0.22,1.7,1.13,0.02,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","ACGTATATAATCGTTT",2,10.39,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","A105P N118F",2
"lib1","SARS-CoV-2","ACGTATATCCGAACAT",7,3.34,NA,NA,NA,NA,NA,NA,"stop","P54G L122C S184*",3
"lib1","SARS-CoV-2","ACGTATCACCTACAAA",3,15.39,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","C6F R25K V52N",3
"lib1","SARS-CoV-2","ACGTATCAGAATGACA",7,8.85,6.1,-4.67,0.4,1.5,1.11,0.01,">1 nonsynonymous","C49Y D98L D112G",3
"lib1","SARS-CoV-2","ACGTATCCATGTGCAA",8,26.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2P C61F L95S T148D",4
"lib1","SARS-CoV-2","ACGTATCGCTATGATA",7,3.79,NA,NA,NA,NA,NA,NA,"stop","F8N R27G D68A F134*",4
"lib1","SARS-CoV-2","ACGTATCTATGACTCT",3,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S G166L",2
"lib1","SARS-CoV-2","ACGTATGAGAATTGGC",3,74.64,9.3,-1.47,0.06,2.89,1.07,0,">1 nonsynonymous","Y119M K132N",2
"lib1","SARS-CoV-2","ACGTATGATTATGCCT",3,54.39,10.79,0.03,0.07,2.92,1.04,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","ACGTATGCATAACAAC",2,118.59,10.69,-0.08,0.04,2.91,1.06,0,"1 nonsynonymous","L188F",1
"lib1","SARS-CoV-2","ACGTATGGACATTGCA",7,15.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F44V A89F Q144L E154F",4
"lib1","SARS-CoV-2","ACGTATGGGGTCGTTA",9,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E T46R V52P",3
"lib1","SARS-CoV-2","ACGTATGTAGCTCGTG",9,158.23,10.6,-0.16,0.04,2.96,1,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","ACGTATTAAAGTGAAT",6,56.29,6.82,-3.94,0.31,1.5,1.11,0.02,">1 nonsynonymous","N92V N120E",2
"lib1","SARS-CoV-2","ACGTATTAGTAGTGAT",1,32.92,10.74,-0.02,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTATTCTCTACGAC",1,10.93,10.62,-0.14,0.12,2.9,1,0.01,">1 nonsynonymous","N1E E135A P149Q",3
"lib1","SARS-CoV-2","ACGTATTTACCAACGA",5,40,9.73,-1.03,0.19,2.08,1.14,0.01,">1 nonsynonymous","P133I S139N",2
"lib1","SARS-CoV-2","ACGTCAAAAGAATCGT",1,8.32,7.65,-3.11,0.25,1.58,1.08,0.02,">1 nonsynonymous","F44S N64Q W106A V153S T201M",5
"lib1","SARS-CoV-2","ACGTCAAAAGTCTTAA",8,129.95,10.76,0,0.04,2.95,1.02,0,">1 nonsynonymous","P54Q F62Y",2
"lib1","SARS-CoV-2","ACGTCAAACATAACAT",3,38.52,9.95,-0.82,0.07,2.76,1.06,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","ACGTCAAAGGCTAGCC",2,89.28,10.09,-0.67,0.07,2.59,1.01,0,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","ACGTCAAAGGGACGAA",2,26.11,7.27,-3.5,0.32,1.56,1.2,0.02,">1 nonsynonymous","N120E C150Y",2
"lib1","SARS-CoV-2","ACGTCAAATCGGGATT",3,20.1,8.77,-1.99,0.07,2.82,1.02,0,">1 nonsynonymous","V32K A89P N171L A190L",4
"lib1","SARS-CoV-2","ACGTCAACATCAGATC",3,18.82,8.04,-2.72,0.44,1.66,1.18,0.07,">1 nonsynonymous","C6M G152V A190L",3
"lib1","SARS-CoV-2","ACGTCAATGAATCTAG",6,0.13,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib1","SARS-CoV-2","ACGTCAATGGCTTCGG",1,26.08,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6N Y121G K128I",3
"lib1","SARS-CoV-2","ACGTCACACACTCTAT",5,125.57,10.15,-0.62,0.08,2.22,1.04,0,">1 nonsynonymous","N30R G146W S164K",3
"lib1","SARS-CoV-2","ACGTCACACGGGGCCC",1,23.35,10.57,-0.2,0.08,2.88,1.06,0,"1 nonsynonymous","S53F",1
"lib1","SARS-CoV-2","ACGTCACATTTCCCGG",1,49.81,9.85,-0.92,0.14,2.18,1.02,0.01,">1 nonsynonymous","A89N V115Q",2
"lib1","SARS-CoV-2","ACGTCACCGAGTAATG",1,14.44,6,-4.76,2,3,1.06,0,">1 nonsynonymous","F99Y R124Y",2
"lib1","SARS-CoV-2","ACGTCACCGCTAGAAG",1,15.84,9.42,-1.34,0.16,1.99,1.12,0.02,">1 nonsynonymous","S19K D97R",2
"lib1","SARS-CoV-2","ACGTCACCGGAAATTG",7,33.07,10.84,0.07,0.09,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGTCACGACGCTATG",6,45.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12L C61G R179T",3
"lib1","SARS-CoV-2","ACGTCACGGGATATAG",3,13.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10M C61F D90G I104Y",4
"lib1","SARS-CoV-2","ACGTCACTATGAAACA",2,26.51,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","N40S L95E",2
"lib1","SARS-CoV-2","ACGTCACTGTGCAGCG",2,15.56,10.58,-0.19,0.11,2.97,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACGTCACTGTTTAATG",1,60.52,10.64,-0.13,0.05,2.9,1.06,0,"1 nonsynonymous","R16C",1
"lib1","SARS-CoV-2","ACGTCACTTTCTAACG",2,7.1,9.8,-0.96,0.12,2.95,1.03,0,">1 nonsynonymous","S43K N107D",2
"lib1","SARS-CoV-2","ACGTCACTTTGTGTGT",9,163.83,8.08,-2.69,0.17,2.18,1.18,0.01,">1 nonsynonymous","Q163R Y175S T201I",3
"lib1","SARS-CoV-2","ACGTCAGATGGGACCC",4,35.85,9.43,-1.34,0.1,2.84,1.1,0,">1 nonsynonymous","N4R Y119A",2
"lib1","SARS-CoV-2","ACGTCAGGATGGTCAG",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93C N107V",2
"lib1","SARS-CoV-2","ACGTCATCACTAAATG",3,32.15,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P7F K26S T46S N64L S113Q R124A Q176S",7
"lib1","SARS-CoV-2","ACGTCATCTCCGATGT",1,6.02,11.08,0.32,0.13,2.9,1.06,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ACGTCATGAGACTCGT",3,19.31,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K94G I142Y N151I Y178L",4
"lib1","SARS-CoV-2","ACGTCATGAGTACACA",1,1.22,NA,NA,NA,NA,NA,NA,"stop","N1* C49Y K87S Q144S",4
"lib1","SARS-CoV-2","ACGTCCAAAGTGTACC",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A N130S",2
"lib1","SARS-CoV-2","ACGTCCAACCAAAAAT",3,13.71,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D59T G101L",2
"lib1","SARS-CoV-2","ACGTCCACCTCACCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13S G101S E135N N157F T170* G174K",6
"lib1","SARS-CoV-2","ACGTCCAGACCCTAAG",2,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S F167D",2
"lib1","SARS-CoV-2","ACGTCCATAAAACTAA",4,11.33,6.24,-4.53,0.69,1.5,1.06,0.03,">1 nonsynonymous","F47L P96E R127T",3
"lib1","SARS-CoV-2","ACGTCCATCAACGCAC",6,34.53,10.04,-0.73,0.15,2.09,1.13,0.01,">1 nonsynonymous","V52F E135L A192Y",3
"lib1","SARS-CoV-2","ACGTCCATGAATTCGA",5,64.11,10.72,-0.05,0.06,2.92,1.05,0,">1 nonsynonymous","D90N T148G",2
"lib1","SARS-CoV-2","ACGTCCCACCTTATAG",2,31.05,10.81,0.05,0.07,2.85,1.09,0,">1 nonsynonymous","G9D S147P",2
"lib1","SARS-CoV-2","ACGTCCCATCACATCC",4,2.74,NA,NA,NA,NA,NA,NA,"stop","G86M W106N T140* V194L",4
"lib1","SARS-CoV-2","ACGTCCCTACGTCTTA",1,29.89,8.23,-2.54,0.38,1.5,1,0.06,">1 nonsynonymous","T55N G83I K132L G166Y",4
"lib1","SARS-CoV-2","ACGTCCGTTCAATTCT",1,30.11,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T15I R27I F126D",3
"lib1","SARS-CoV-2","ACGTCCTATCTATCCA",1,41.21,10.17,-0.59,0.06,2.92,1.01,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","ACGTCCTGATTGCTGA",1,37.75,10.84,0.07,0.08,2.94,1.05,0,"1 nonsynonymous","S200L",1
"lib1","SARS-CoV-2","ACGTCTAAATCTTACG",6,0.47,NA,NA,NA,NA,NA,NA,"stop","A14F F99G L187*",3
"lib1","SARS-CoV-2","ACGTCTACGAATTAGA",4,32.45,7.5,-3.26,0.23,1.5,1.24,0.01,">1 nonsynonymous","V37L A89D",2
"lib1","SARS-CoV-2","ACGTCTCAGGTAAAGC",2,18.74,6,-4.76,1.57,1.5,1.14,0.01,">1 nonsynonymous","G101A C158H",2
"lib1","SARS-CoV-2","ACGTCTCTAAGGCATG",2,17.06,10.1,-0.66,0.06,2.87,1.06,0,">1 nonsynonymous","T55F G146W T201K",3
"lib1","SARS-CoV-2","ACGTCTTACCTCAGGG",3,28.31,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G117A R124Q P133G P149L C158V",5
"lib1","SARS-CoV-2","ACGTCTTAGTTACAAC",6,128.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V11N K26M N120P Q176E",4
"lib1","SARS-CoV-2","ACGTCTTGGTAATAAG",6,130.4,10.7,-0.07,0.05,2.91,1.04,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","ACGTCTTTATCCTTCC",10,77.71,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R73E P82E D98P",3
"lib1","SARS-CoV-2","ACGTCTTTCCCTATAA",17,139.05,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12K N64H I142K T148W",4
"lib1","SARS-CoV-2","ACGTGAAAACATCATT",5,57.42,9.01,-1.75,0.23,1.5,1.1,0.02,">1 nonsynonymous","F8P W106V",2
"lib1","SARS-CoV-2","ACGTGAATATACAATT",6,93.13,10.61,-0.16,0.03,2.95,1.03,0,">1 nonsynonymous","L60V T148D",2
"lib1","SARS-CoV-2","ACGTGAATGACCTCGC",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K V182G",2
"lib1","SARS-CoV-2","ACGTGAATTTCTGGAA",5,19.59,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D90N R124H",2
"lib1","SARS-CoV-2","ACGTGACGGCGTACAT",1,18.52,7.79,-2.97,0.29,1.5,1.07,0.03,">1 nonsynonymous","D59G Y121G",2
"lib1","SARS-CoV-2","ACGTGAGAATACATCA",7,3.77,NA,NA,NA,NA,NA,NA,"stop","K26E I104F F126H E135* G146K",5
"lib1","SARS-CoV-2","ACGTGAGATAGTAAGT",5,44.73,9.7,-1.06,0.18,1.85,1.06,0.01,">1 nonsynonymous","T85L P96D",2
"lib1","SARS-CoV-2","ACGTGAGCTAGACCTA",7,0.52,NA,NA,NA,NA,NA,NA,"stop","L60I Y66N W106* I142T A190R",5
"lib1","SARS-CoV-2","ACGTGATCTTTAAAAC",1,43,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A33S C61V R73S D90V T148D",5
"lib1","SARS-CoV-2","ACGTGATTATGTACGA",3,99.45,8.24,-2.52,0.15,1.79,1.12,0.01,">1 nonsynonymous","E76S G117A",2
"lib1","SARS-CoV-2","ACGTGATTGCAAACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W T15V Y119W D137S",4
"lib1","SARS-CoV-2","ACGTGCAAAATAATTG",3,6.59,10.45,-0.32,0.26,2.9,1.09,0.03,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","ACGTGCAATAAGCTGA",1,15.84,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N1R I88Y R127Q",3
"lib1","SARS-CoV-2","ACGTGCACAATTATAG",5,25.76,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F12L A18G R73F G117F",4
"lib1","SARS-CoV-2","ACGTGCCTCGGACCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","V11F I104H F134* T201*",4
"lib1","SARS-CoV-2","ACGTGCGGCCTTAACC",3,74.23,10.74,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTGTAAGCACAAAC",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M V103G N110G N171T K198G",5
"lib1","SARS-CoV-2","ACGTGTACCAGATGCG",8,186.83,9.07,-1.69,0.05,2.77,1.07,0,">1 nonsynonymous","A22N D97A Y119E",3
"lib1","SARS-CoV-2","ACGTGTTGTACTGTAG",2,71.89,10.57,-0.19,0.09,2.75,1.11,0,">1 nonsynonymous","A33T A42G",2
"lib1","SARS-CoV-2","ACGTTAAATATAACCT",10,167.57,10.71,-0.06,0.08,2.9,1.07,0,">1 nonsynonymous","K26R K56S D97V",3
"lib1","SARS-CoV-2","ACGTTAACAAACGTTA",1,201.84,10.71,-0.05,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTAACAACTTGAT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","G9E K128E F167*",3
"lib1","SARS-CoV-2","ACGTTAACGAAGGAAT",2,23.31,10.66,-0.1,0.06,2.86,1.09,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","ACGTTAACTATTAATA",1,13.54,10.69,-0.07,0.11,2.97,1,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","ACGTTAAGCTACGGCC",1,17.23,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","Y35E S43W A105V G116K S129R",5
"lib1","SARS-CoV-2","ACGTTAAGGAAGAATG",8,205.67,10.2,-0.57,0.03,2.89,1.03,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","ACGTTAATACGTATTA",5,151.89,10.32,-0.44,0.05,2.81,1.02,0,">1 nonsynonymous","S45C Y178T",2
"lib1","SARS-CoV-2","ACGTTAATATTTCCGG",11,121.88,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L60E I104S V115K R124V",4
"lib1","SARS-CoV-2","ACGTTAATTAGACGTT",9,307.82,8.09,-2.67,0.18,1.67,1.11,0.01,">1 nonsynonymous","V37Y G117I F185I",3
"lib1","SARS-CoV-2","ACGTTAATTCTGGAGT",3,68.97,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C61A R78S A105Y D112K Y123F",5
"lib1","SARS-CoV-2","ACGTTACAAATCGTAA",4,15.6,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","I88K L125R",2
"lib1","SARS-CoV-2","ACGTTACCATTAAAGG",2,12.73,6.39,-4.38,0.64,1.5,1.22,0.03,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","ACGTTACGATTCACTT",6,42.17,10.44,-0.32,0.05,2.88,1.05,0,">1 nonsynonymous","P7R S36D C61I K132M",4
"lib1","SARS-CoV-2","ACGTTACGTTCCACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P54D G74* P96I",3
"lib1","SARS-CoV-2","ACGTTACTCAGCCATA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101S A190D",2
"lib1","SARS-CoV-2","ACGTTACTCGCCTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R G101L N151A T201L",4
"lib1","SARS-CoV-2","ACGTTAGAACATACTA",8,136.37,9.03,-1.74,0.13,1.51,1.13,0.01,">1 nonsynonymous","E10N A14L A22L",3
"lib1","SARS-CoV-2","ACGTTAGATGTAGGCA",1,6.99,9.38,-1.38,0.21,1.54,1.03,0.02,">1 nonsynonymous","I28K D97A",2
"lib1","SARS-CoV-2","ACGTTAGCACTGACCT",4,84.56,10.62,-0.14,0.03,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTAGCACTTGATC",2,18.07,10.56,-0.2,0.05,2.88,1.11,0,"1 nonsynonymous","F160I",1
"lib1","SARS-CoV-2","ACGTTAGCGCTAGATA",1,5.09,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","V20S I88R E141L Y175S",4
"lib1","SARS-CoV-2","ACGTTAGTAAGAACGC",1,40.76,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R27L Y143P",2
"lib1","SARS-CoV-2","ACGTTAGTTTGAAGGA",2,0.42,NA,NA,NA,NA,NA,NA,"stop","R16V T55C L122K S129* E141C",5
"lib1","SARS-CoV-2","ACGTTATAAAGAATCT",3,0.09,NA,NA,NA,NA,NA,NA,"stop","S113* A145E",2
"lib1","SARS-CoV-2","ACGTTATAAGTGGTGA",7,74.37,8,-2.76,0.18,1.5,1.11,0.01,">1 nonsynonymous","N1Y C31V K87F L131M",4
"lib1","SARS-CoV-2","ACGTTATACCGCCTCC",4,24.4,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D68A K94T L183S",3
"lib1","SARS-CoV-2","ACGTTATACCTGACAA",4,102.36,9.89,-0.87,0.12,2.34,1.05,0.01,">1 nonsynonymous","C6S T85M",2
"lib1","SARS-CoV-2","ACGTTATCCAAAGTGC",8,6.32,9.62,-1.15,0.3,1.86,1.05,0.04,">1 nonsynonymous","T3K N13I N151K",3
"lib1","SARS-CoV-2","ACGTTATGTGTGACTT",7,109.59,10.74,-0.03,0.05,2.96,1.05,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","ACGTTATGTTGTTCCA",2,5.36,6,-4.76,2,3,1,0,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","ACGTTCAACGTACTAC",1,55.04,8.36,-2.41,0.1,2.81,1.02,0,">1 nonsynonymous","C61G S113V",2
"lib1","SARS-CoV-2","ACGTTCAAGGGGTCAA",2,50.62,10.74,-0.03,0.07,2.77,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTCAATACCTTCC",2,22.36,10.65,-0.11,0.05,2.9,1.08,0,">1 nonsynonymous","I2V K198M",2
"lib1","SARS-CoV-2","ACGTTCACTTTTGATG",1,6.04,10.22,-0.54,0.16,3,1.01,0.01,">1 nonsynonymous","F134T Q163H",2
"lib1","SARS-CoV-2","ACGTTCAGTATAAGTT",3,119.38,9.13,-1.64,0.06,2.68,1.14,0,">1 nonsynonymous","I142N N151L",2
"lib1","SARS-CoV-2","ACGTTCATATATACTT",1,75.8,10.05,-0.72,0.06,2.85,1,0,">1 nonsynonymous","S41P R78P N110V G116S",4
"lib1","SARS-CoV-2","ACGTTCCAGAATGGGC",5,32.32,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","F62M D90P V115S",3
"lib1","SARS-CoV-2","ACGTTCCATTAACGGC",2,66.76,10.06,-0.71,0.08,2.69,1.04,0,">1 nonsynonymous","C6N S41I S129A",3
"lib1","SARS-CoV-2","ACGTTCCATTCCCAAA",4,137.93,10.72,-0.04,0.07,2.88,1.07,0,"1 nonsynonymous","T55D",1
"lib1","SARS-CoV-2","ACGTTCCTGGCATATT",3,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V I104L N120M Y175F",4
"lib1","SARS-CoV-2","ACGTTCCTTTTAAATA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","E10V V32A N107A K114* G174W",5
"lib1","SARS-CoV-2","ACGTTCGATGAACGCC",4,41.55,10.75,-0.01,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTCGCGTTTCTAG",7,2,NA,NA,NA,NA,NA,NA,"stop","S41A N58Q W106Q G116*",4
"lib1","SARS-CoV-2","ACGTTCGGGGACGAAC",3,13.77,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S43C C61W P161T R179M",4
"lib1","SARS-CoV-2","ACGTTCGTCAAGGTCC",3,467.48,9.37,-1.4,0.11,1.71,1.09,0.01,">1 nonsynonymous","V52D T100F E141T",3
"lib1","SARS-CoV-2","ACGTTCTACCAATAGA",5,78.76,10.87,0.11,0.09,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTCTACTATTTAG",5,119.86,9.88,-0.89,0.08,2.15,1.11,0,">1 nonsynonymous","G9L D59G D98S E141R",4
"lib1","SARS-CoV-2","ACGTTCTAGGATCAAA",4,120.91,7.28,-3.48,0.27,1.5,1.1,0.02,">1 nonsynonymous","C31L V115Y F134H Y159H",4
"lib1","SARS-CoV-2","ACGTTGAAAACCACAC",2,23.42,10.49,-0.27,0.07,2.94,1.05,0,">1 nonsynonymous","T15H K128E",2
"lib1","SARS-CoV-2","ACGTTGAAAGAAGTGA",8,89,6,-4.76,1.25,1.5,1.18,0.02,">1 nonsynonymous","S19V L60C D97S P177R",4
"lib1","SARS-CoV-2","ACGTTGAACACTTTGG",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P A42F Y175S",3
"lib1","SARS-CoV-2","ACGTTGAATGGAGCTA",4,10.22,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34S F62N T63K I88W F167K",5
"lib1","SARS-CoV-2","ACGTTGATAGTCGGGG",2,21.21,6.18,-4.59,0.25,3,1.04,0,">1 nonsynonymous","N4F R16S P82W",3
"lib1","SARS-CoV-2","ACGTTGATTCATAAAG",6,2.63,NA,NA,NA,NA,NA,NA,"stop","D98M N107* C158Y",3
"lib1","SARS-CoV-2","ACGTTGCAATATTGAA",1,15.52,10.65,-0.11,0.29,1.98,1.03,0.03,">1 nonsynonymous","A22V S41C K56G",3
"lib1","SARS-CoV-2","ACGTTGCACCCTTAAA",2,5.65,9.3,-1.46,0.2,2.77,1.07,0.01,">1 nonsynonymous","C31T G174K",2
"lib1","SARS-CoV-2","ACGTTGCCGTCTTTTA",6,2.27,NA,NA,NA,NA,NA,NA,"stop","V37P F44* P54N G174V G196Y",5
"lib1","SARS-CoV-2","ACGTTGCGAGATAATT",1,10.66,10.44,-0.33,0.23,2.69,1.04,0.03,">1 nonsynonymous","T15K L162F",2
"lib1","SARS-CoV-2","ACGTTGCTTTATGTCT",1,27.84,9.22,-1.55,0.13,2.86,1.14,0,">1 nonsynonymous","L5M G146E",2
"lib1","SARS-CoV-2","ACGTTGGCGACCTACC",2,32.52,10.66,-0.1,0.05,2.88,1.05,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","ACGTTGGGGGCCCGAG",2,94.27,9.73,-1.04,0.1,2.5,1.08,0,">1 nonsynonymous","V52S Q163N",2
"lib1","SARS-CoV-2","ACGTTGGTACAAATCT",11,92.12,6.53,-4.24,0.45,1.5,1.18,0.02,">1 nonsynonymous","R127I T148G",2
"lib1","SARS-CoV-2","ACGTTGTAAGAAGTAG",4,17.2,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L5C G9N D59N W106R F167C",5
"lib1","SARS-CoV-2","ACGTTGTACACTTTAA",3,43.76,9.97,-0.8,0.11,2.44,1,0,">1 nonsynonymous","F8P A42N",2
"lib1","SARS-CoV-2","ACGTTGTACCAGACAC",6,37.7,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L131R P149F",2
"lib1","SARS-CoV-2","ACGTTGTATAATTAGG",4,13.91,10.17,-0.59,0.2,2.77,1,0.01,"1 nonsynonymous","P133V",1
"lib1","SARS-CoV-2","ACGTTGTGAGAATATC",3,72.65,10.57,-0.19,0.06,2.8,1.04,0,">1 nonsynonymous","G9T A42D D97N E141S K198A",5
"lib1","SARS-CoV-2","ACGTTGTGGGACCGTT",2,0.78,NA,NA,NA,NA,NA,NA,"stop","A22W S36L Q84* P96L",4
"lib1","SARS-CoV-2","ACGTTTAAACCTTTTA",1,13.62,6.83,-3.94,0.33,1.5,1.11,0.02,">1 nonsynonymous","A14T F47N S53M K87R G174S P197S",6
"lib1","SARS-CoV-2","ACGTTTACAGGGCCAG",3,46.93,10.71,-0.05,0.1,2.89,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACGTTTACCAAAACCT",2,8.33,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91V N107G",2
"lib1","SARS-CoV-2","ACGTTTACTTGCAACT",3,10.69,NA,NA,NA,NA,NA,NA,"stop","K26* L122*",2
"lib1","SARS-CoV-2","ACGTTTAGTTTACGCC",5,1.16,NA,NA,NA,NA,NA,NA,"stop","T55P D97* S129*",3
"lib1","SARS-CoV-2","ACGTTTCAAACGGACT",5,36.27,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","P54L I72T D90C A105S S139L G152I Y175G K198A",8
"lib1","SARS-CoV-2","ACGTTTCATGAAGATG",1,43.11,6.11,-4.65,0.54,1.5,1.12,0.01,">1 nonsynonymous","A18R K87L E141I Q176S",4
"lib1","SARS-CoV-2","ACGTTTCCCCATTGTT",2,12.13,6,-4.76,2,3,1.08,0,">1 nonsynonymous","C6W V32H Y91V I104W",4
"lib1","SARS-CoV-2","ACGTTTCGTACCAAAT",17,192.34,10.32,-0.44,0.05,2.93,1,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","ACGTTTCTGTTCTCCG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","I2* P177Y",2
"lib1","SARS-CoV-2","ACGTTTGAGCTTAACA",10,6.23,NA,NA,NA,NA,NA,NA,"stop","D59W Y66S A81R N107L R136T G174* T201K",7
"lib1","SARS-CoV-2","ACGTTTGAGTGACATG",10,62.52,8.11,-2.66,0.41,1.5,1,0.07,">1 nonsynonymous","G74S K94M L122V S129N N157P G174V",6
"lib1","SARS-CoV-2","ACGTTTGCTATCTGGC",10,290.22,10.26,-0.51,0.05,2.85,1,0,">1 nonsynonymous","T3R G9M D59S T140M",4
"lib1","SARS-CoV-2","ACGTTTGGCCCTGATT",7,55.5,10.7,-0.07,0.05,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACGTTTGGCGAATATC",1,49.63,9.89,-0.87,0.07,2.89,1.04,0,">1 nonsynonymous","E10P C61Q L125A N151T",4
"lib1","SARS-CoV-2","ACGTTTGGTTATGGGT",5,9.36,9.87,-0.89,0.37,1.5,1.06,0.07,">1 nonsynonymous","L5E R27E R136P T201L",4
"lib1","SARS-CoV-2","ACGTTTGTTCATCGAG",3,9.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I72R W106S",2
"lib1","SARS-CoV-2","ACGTTTTAATTTGCAT",1,47.18,10.15,-0.61,0.06,2.88,1.02,0,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","ACGTTTTATAAATAGC",1,17.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35E N107T",2
"lib1","SARS-CoV-2","ACGTTTTATGATCGTA",2,16.59,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","Y91E F99Q N171L",3
"lib1","SARS-CoV-2","ACGTTTTCAATATGAA",6,69.4,10.27,-0.5,0.05,2.88,1.03,0,">1 nonsynonymous","L5R R16P",2
"lib1","SARS-CoV-2","ACGTTTTCAGAAACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V11I V37R K48L P82* G101C",5
"lib1","SARS-CoV-2","ACGTTTTCGAAAATCT",5,12.5,NA,NA,NA,NA,NA,NA,"stop","C6* Y35R T55L G86S A89V",5
"lib1","SARS-CoV-2","ACGTTTTCTGACTAAA",3,57.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25L Y39A L60R K199Y",4
"lib1","SARS-CoV-2","ACGTTTTGCACACAAT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","G83L T201*",2
"lib1","SARS-CoV-2","ACGTTTTGGAATGTTC",2,0.24,NA,NA,NA,NA,NA,NA,"stop","K26* T55P N130Y T148N",4
"lib1","SARS-CoV-2","ACGTTTTTGGATTCTA",3,54.95,10.72,-0.05,0.08,2.85,1.08,0,">1 nonsynonymous","R27V Y39L G155A",3
"lib1","SARS-CoV-2","ACTAAAAAAGAATTGG",6,117.39,10.77,0,0.09,2.89,1.06,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","ACTAAAAAAGTCACAG",4,40.18,9.98,-0.78,0.13,2.04,1.07,0.01,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","ACTAAAAAAGTTTGAT",3,47.16,10.61,-0.15,0.07,2.83,1.03,0,">1 nonsynonymous","T55A D98I",2
"lib1","SARS-CoV-2","ACTAAAAACGAATTGT",3,18.1,10.79,0.02,0.09,2.96,1.01,0,">1 nonsynonymous","F62M K198M",2
"lib1","SARS-CoV-2","ACTAAAAACTTGAGGC",7,114.15,10.7,-0.07,0.04,2.93,1.01,0,"1 nonsynonymous","Y39D",1
"lib1","SARS-CoV-2","ACTAAAAAGAACAAAA",9,143.16,10.72,-0.04,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAAAAGGATATAT",8,37.47,6,-4.76,1.91,1.5,1.21,0.02,">1 nonsynonymous","T3W F70E",2
"lib1","SARS-CoV-2","ACTAAAAATAAGAAAT",1,15.34,10.53,-0.24,0.12,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAAAATAATAACA",2,28.21,10.11,-0.65,0.09,2.76,1.06,0,">1 nonsynonymous","A105Y G146S",2
"lib1","SARS-CoV-2","ACTAAAACAGACCGAT",2,103.6,8.33,-2.44,0.16,1.8,1.14,0.01,">1 nonsynonymous","L38H I104L S129E G146N P197L",5
"lib1","SARS-CoV-2","ACTAAAACCCGTTCTG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L V71K N109I Y165N G174F T201C",6
"lib1","SARS-CoV-2","ACTAAAACGATCTATG",11,18.35,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","F8W F47G I104Q N110W",4
"lib1","SARS-CoV-2","ACTAAAACTAATATAT",5,82.53,7.88,-2.88,0.11,1.82,1.11,0,">1 nonsynonymous","L60F K87S A145P K198Y",4
"lib1","SARS-CoV-2","ACTAAAACTCCAACCA",3,6.87,9.04,-1.72,0.12,1.74,1.05,0,">1 nonsynonymous","I2P F44H S69L",3
"lib1","SARS-CoV-2","ACTAAAAGAAAAACTG",2,17.98,10.75,-0.02,0.06,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAAAGACTATCCC",6,2.46,NA,NA,NA,NA,NA,NA,"stop","K56L V180T G196*",3
"lib1","SARS-CoV-2","ACTAAAAGGGAGCCAT",3,38.57,7.54,-3.22,0.28,1.5,1.15,0.02,">1 nonsynonymous","D90C S113Q",2
"lib1","SARS-CoV-2","ACTAAAATAAATGGTA",1,2.41,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAAATAACAAATG",2,48.35,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9R Y50N Y93L D98W K128S",5
"lib1","SARS-CoV-2","ACTAAAATAACCAAAA",2,44.55,6,-4.76,1.47,1.75,1.18,0.01,">1 nonsynonymous","F126L F167P",2
"lib1","SARS-CoV-2","ACTAAAATAAGCTACA",5,33.07,10.75,-0.01,0.07,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAAATCATGCAAT",3,26.94,6.17,-4.6,0.79,1.5,1.17,0.03,">1 nonsynonymous","V37S L95H F160A",3
"lib1","SARS-CoV-2","ACTAAAATCCGACATG",4,23.58,7.4,-3.37,0.38,1.5,1.07,0.06,">1 nonsynonymous","A14Q F160T F167L",3
"lib1","SARS-CoV-2","ACTAAAATCTAGTCTG",7,1.2,NA,NA,NA,NA,NA,NA,"stop","A42N P149* C158N",3
"lib1","SARS-CoV-2","ACTAAAATGGTCCGTA",11,145.49,10.69,-0.08,0.05,2.89,1.06,0,">1 nonsynonymous","V37T K128S T140L",3
"lib1","SARS-CoV-2","ACTAAAATTGATACTA",1,25.86,9.51,-1.25,0.31,1.5,1,0.05,">1 nonsynonymous","F12W L38R C61W T201S",4
"lib1","SARS-CoV-2","ACTAAAATTGCACCCT",2,30.58,10.35,-0.41,0.07,2.92,1,0,">1 nonsynonymous","Y39H S113A S184K",3
"lib1","SARS-CoV-2","ACTAAAATTTAGAGGG",1,0.61,NA,NA,NA,NA,NA,NA,"stop","C6D K26* E135C",3
"lib1","SARS-CoV-2","ACTAAAATTTTTACCG",1,0.49,NA,NA,NA,NA,NA,NA,"stop","W23S L57F P96* G174P",4
"lib1","SARS-CoV-2","ACTAAACAAACAACCA",2,29.84,10.71,-0.05,0.12,2.73,1.26,0.01,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","ACTAAACAACTGTTTA",5,101.68,9.91,-0.85,0.11,1.98,1.07,0,">1 nonsynonymous","R27W N40L E141V",3
"lib1","SARS-CoV-2","ACTAAACAGAGGGCCA",3,9.53,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14I F62K D90T V103Q L188R",5
"lib1","SARS-CoV-2","ACTAAACATGATTCGT",2,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73M T85K L122Y",3
"lib1","SARS-CoV-2","ACTAAACGAGCAGACT",1,44.44,10.8,0.04,0.06,2.93,1.02,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","ACTAAACGCTACCGAT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib1","SARS-CoV-2","ACTAAACTATTATTAT",8,26.14,6.01,-4.76,1.32,1.55,1.21,0.03,">1 nonsynonymous","L95G V115R",2
"lib1","SARS-CoV-2","ACTAAACTCTAAATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R N120M K128V",3
"lib1","SARS-CoV-2","ACTAAACTGGTGATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28V T63M S129*",3
"lib1","SARS-CoV-2","ACTAAACTTAGATGGT",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37H I88F",2
"lib1","SARS-CoV-2","ACTAAACTTCATTGGC",2,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N F99Q W106G",3
"lib1","SARS-CoV-2","ACTAAAGAAAAAACCG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","F17A S41* S113T",3
"lib1","SARS-CoV-2","ACTAAAGAATCCAACA",3,56.66,10.66,-0.1,0.04,2.91,1.01,0,">1 nonsynonymous","K114R P149C Y178H",3
"lib1","SARS-CoV-2","ACTAAAGAATCTAAAA",11,4.64,NA,NA,NA,NA,NA,NA,"stop","A33E S45K L57H Y91C G146V C195*",6
"lib1","SARS-CoV-2","ACTAAAGACTAAGCTA",1,8.62,10.66,-0.1,0.06,2.92,1.06,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","ACTAAAGAGCTCAATA",5,56.45,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L60V A105S R124P F185Y",4
"lib1","SARS-CoV-2","ACTAAAGAGTAAATGC",1,8.39,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S45W C61R D68G C150P",4
"lib1","SARS-CoV-2","ACTAAAGATTGACATA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K G9Y C61V Q84E I138M G174R S200R",7
"lib1","SARS-CoV-2","ACTAAAGCACTTTACC",7,37.55,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","P54T N92T S139P",3
"lib1","SARS-CoV-2","ACTAAAGCTGGATATA",1,13.74,6,-4.76,0.81,3,1.11,0.01,">1 nonsynonymous","K26E C61Q D90M P96L R136S",5
"lib1","SARS-CoV-2","ACTAAAGGCGGTAACC",2,17.46,6,-4.76,2,3,1.08,0,">1 nonsynonymous","S19D P82M G86R N130T Q144L",5
"lib1","SARS-CoV-2","ACTAAAGTACCGTAAT",3,19.42,10.62,-0.15,0.05,2.91,1.04,0,"1 nonsynonymous","R78L",1
"lib1","SARS-CoV-2","ACTAAAGTCCCACCAA",10,97.48,6.17,-4.59,1.04,1.5,1.31,0.03,">1 nonsynonymous","F8N A14L L95M",3
"lib1","SARS-CoV-2","ACTAAAGTCCTGAGAT",6,43.45,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","V11A S53L C61T R73K P133L T140G G174D",7
"lib1","SARS-CoV-2","ACTAAAGTGAGTCTAG",6,40.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61S R179F",2
"lib1","SARS-CoV-2","ACTAAAGTGGCTTAGG",3,265.97,10.3,-0.47,0.04,2.8,1.03,0,">1 nonsynonymous","K56L Q84K N120K",3
"lib1","SARS-CoV-2","ACTAAAGTTACTATAT",3,76.45,8.36,-2.41,0.15,2.79,1.05,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","ACTAAAGTTATGCGAC",5,74.7,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","Y50P C61N A81E A105P Y119G P177I",6
"lib1","SARS-CoV-2","ACTAAAGTTATTAAAT",8,147.25,8.37,-2.4,0.14,1.95,1.09,0.01,">1 nonsynonymous","T140R Q176V",2
"lib1","SARS-CoV-2","ACTAAAGTTCATCACA",8,15,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A33V V77A G83R W106E G146Q",5
"lib1","SARS-CoV-2","ACTAAATAAAACAATT",12,116.55,10.01,-0.75,0.08,2.22,1.02,0,">1 nonsynonymous","T100F W106L",2
"lib1","SARS-CoV-2","ACTAAATAAATAAATC",4,13.98,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42H R124N",2
"lib1","SARS-CoV-2","ACTAAATAAATCCGGA",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73I V153R Y178R",3
"lib1","SARS-CoV-2","ACTAAATAACAGAAGT",13,149.97,10.75,-0.01,0.06,2.95,1.03,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","ACTAAATAACAGATAA",2,2.27,NA,NA,NA,NA,NA,NA,"stop","E10* Y39T S45T S108L P133T P177H",6
"lib1","SARS-CoV-2","ACTAAATAACATGCTC",3,34.94,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14G C61W I142Y R179I",4
"lib1","SARS-CoV-2","ACTAAATAATAAGAGT",8,208.02,9.6,-1.16,0.07,2.72,1.09,0,">1 nonsynonymous","A67S L125G",2
"lib1","SARS-CoV-2","ACTAAATAATATTAAG",5,63.74,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R27G N64T T140R F156W F167L",5
"lib1","SARS-CoV-2","ACTAAATACACCACAC",3,27.16,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","I2F K87S D112E G146Y",4
"lib1","SARS-CoV-2","ACTAAATACCACACTA",5,106.08,10.05,-0.71,0.08,2.41,1.01,0,">1 nonsynonymous","N40I N110V",2
"lib1","SARS-CoV-2","ACTAAATAGAGAACCT",1,62.52,6,-4.76,0.63,1.5,1.12,0,">1 nonsynonymous","F12D F44T T55V E135M G155S P169Q",6
"lib1","SARS-CoV-2","ACTAAATATAAATACA",5,14.61,7.79,-2.97,0.32,1.5,1.25,0.04,">1 nonsynonymous","S45E N64S F99A",3
"lib1","SARS-CoV-2","ACTAAATATACTTTTA",3,109.27,10.75,-0.01,0.06,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAATCAAAGGCTG",2,5.3,10.64,-0.12,0.17,2.67,1.31,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAATCTAACGTTT",1,64.08,10.74,-0.02,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTAAATCTTAAGAAT",1,70.91,10.71,-0.06,0.06,2.89,1.07,0,">1 nonsynonymous","L125I L188V",2
"lib1","SARS-CoV-2","ACTAAATGAAAATATA",4,46.29,10.02,-0.75,0.08,2.55,1.05,0,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","ACTAAATGATATTATT",2,15.94,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","Y93S A105R G196S",3
"lib1","SARS-CoV-2","ACTAAATGCCCAGGCT",2,7.72,10.6,-0.17,0.14,2.75,1.07,0.01,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","ACTAAATTAACAAGAC",2,37.07,9.74,-1.02,0.05,2.98,1.02,0,">1 nonsynonymous","I28L Y35I G83R P169E",4
"lib1","SARS-CoV-2","ACTAAATTATTAAGAG",1,28.32,9.72,-1.04,0.05,2.89,1.07,0,">1 nonsynonymous","T170F K198R",2
"lib1","SARS-CoV-2","ACTAAATTCAATCAGA",1,33.17,10.78,0.02,0.07,2.98,1.01,0,">1 nonsynonymous","A33G Y178H",2
"lib1","SARS-CoV-2","ACTAAATTGAACATAA",4,1.56,NA,NA,NA,NA,NA,NA,"stop","A22S K87S D112*",3
"lib1","SARS-CoV-2","ACTAACAACTAATCAA",9,24.9,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N4K G86R P133F",3
"lib1","SARS-CoV-2","ACTAACAAGAAAAGCA",2,76.26,10.82,0.05,0.05,2.87,1.04,0,"1 nonsynonymous","N1H",1
"lib1","SARS-CoV-2","ACTAACAAGGACATTC",3,69.23,9.16,-1.6,0.14,1.76,1.13,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","ACTAACAATGCACGAT",1,35.87,10.07,-0.69,0.06,2.91,1.02,0,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","ACTAACAATTGGCTAT",2,35.7,10.83,0.07,0.07,2.93,1.02,0,">1 nonsynonymous","R16T T100K",2
"lib1","SARS-CoV-2","ACTAACACGATAAAAA",7,77.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51A G86R Y119L",3
"lib1","SARS-CoV-2","ACTAACACTCCAGAAT",3,28.8,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","C6T F99T W106G N151C",4
"lib1","SARS-CoV-2","ACTAACAGATTCAAAC",1,32.88,6,-4.76,2,2.38,1.16,0,">1 nonsynonymous","D68T Q84L S139I A192G",4
"lib1","SARS-CoV-2","ACTAACATAATAACTG",3,8.83,10.25,-0.51,0.08,2.81,1.06,0,">1 nonsynonymous","A22Q G152T",2
"lib1","SARS-CoV-2","ACTAACATAGAGTACA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","N130C T140* T201V",3
"lib1","SARS-CoV-2","ACTAACATATGAAACA",4,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F G74A",2
"lib1","SARS-CoV-2","ACTAACATGTTGTGTC",6,49.99,7.9,-2.86,0.25,1.5,1.11,0.02,">1 nonsynonymous","V103T Q176M",2
"lib1","SARS-CoV-2","ACTAACATTCATTAAG",1,2.31,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","ACTAACATTTTGAATG",2,58.4,10.73,-0.04,0.09,2.9,1.06,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","ACTAACCAACTAAATT",3,78.21,8.66,-2.1,0.1,2.86,1.13,0,">1 nonsynonymous","N110K F126G T201M",3
"lib1","SARS-CoV-2","ACTAACCAATCTGCTA",4,33.97,9.13,-1.64,0.18,1.83,1.23,0.02,">1 nonsynonymous","C6P F12Y",2
"lib1","SARS-CoV-2","ACTAACCACCCCTGTC",2,122.01,10.21,-0.56,0.04,2.85,1.03,0,">1 nonsynonymous","P161A H189R",2
"lib1","SARS-CoV-2","ACTAACCCAAGCTACA",6,61.74,10.03,-0.73,0.09,2.44,1.05,0,">1 nonsynonymous","L5E N64T V182T K199N",4
"lib1","SARS-CoV-2","ACTAACCCATATTAAT",7,46.28,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D90F G172E",2
"lib1","SARS-CoV-2","ACTAACCCGATAAATT",3,23.88,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","K56W Y91H D98W A105I",4
"lib1","SARS-CoV-2","ACTAACCCGCAATGAG",5,52.64,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F62C V103F",2
"lib1","SARS-CoV-2","ACTAACCGATCAAACA",15,35.42,NA,NA,NA,NA,NA,NA,"stop","T3* V77R Y93S F160Q",4
"lib1","SARS-CoV-2","ACTAACCGGTTTAGTA",6,92.86,10.25,-0.51,0.08,2.74,1.01,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","ACTAACCTCCAGATAT",1,6.28,7.46,-3.31,0.66,1.84,1.04,0.07,">1 nonsynonymous","W106D C158D K199M",3
"lib1","SARS-CoV-2","ACTAACCTGCGCATAA",7,96.32,9.18,-1.58,0.16,1.75,1.13,0.01,">1 nonsynonymous","T3S D59I A81V",3
"lib1","SARS-CoV-2","ACTAACGAAAGGGCTA",12,122.72,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R25L N58K",2
"lib1","SARS-CoV-2","ACTAACGACCGGGGTT",9,1.48,NA,NA,NA,NA,NA,NA,"stop","F44* D137L",2
"lib1","SARS-CoV-2","ACTAACGCAGCGGCAA",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I K48L F99E K128L",4
"lib1","SARS-CoV-2","ACTAACGGCTCTTTGT",3,18.39,10.87,0.1,0.1,2.96,1.01,0,">1 nonsynonymous","D59E N171I",2
"lib1","SARS-CoV-2","ACTAACGGGTAAAACG",2,45.61,10.81,0.04,0.09,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAACGGGTTTAATT",4,108.16,10.74,-0.03,0.04,2.93,1.05,0,"1 nonsynonymous","K198I",1
"lib1","SARS-CoV-2","ACTAACGTACACGATA",2,7.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V77L P82S C158I",3
"lib1","SARS-CoV-2","ACTAACGTGCTCAACC",5,64.28,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T55D G86W C158I S200H",4
"lib1","SARS-CoV-2","ACTAACTAATTCTACC",4,47.91,8.32,-2.45,0.18,1.83,1.12,0.01,">1 nonsynonymous","N92S Y119V Q168S",3
"lib1","SARS-CoV-2","ACTAACTAGAAGATCC",9,184.53,6,-4.76,1.84,1.5,1.21,0.01,">1 nonsynonymous","N58G C150I",2
"lib1","SARS-CoV-2","ACTAACTCCACAAACA",3,8.18,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I104Y F126L Y165R S184C",4
"lib1","SARS-CoV-2","ACTAACTTAATTGAAT",2,93.41,8.37,-2.4,0.1,1.77,1.1,0,">1 nonsynonymous","S113E G152D Y178H",3
"lib1","SARS-CoV-2","ACTAACTTCCATGAAT",9,6.03,NA,NA,NA,NA,NA,NA,"stop","I104* K128V",2
"lib1","SARS-CoV-2","ACTAACTTGGTTCAAA",4,60.03,10.74,-0.03,0.06,2.98,1,0,">1 nonsynonymous","K56L G116P E141D",3
"lib1","SARS-CoV-2","ACTAACTTTGCGCGGT",4,29.22,9.03,-1.73,0.19,2.26,1.3,0.02,">1 nonsynonymous","P161S V173P",2
"lib1","SARS-CoV-2","ACTAAGAAAACACAAA",7,39.75,6,-4.76,1.04,1.5,1.11,0,">1 nonsynonymous","G9F S19T I104E P161R",4
"lib1","SARS-CoV-2","ACTAAGAAACACCATA",9,43.72,6.19,-4.58,0.73,1.5,1.23,0.02,">1 nonsynonymous","T100G A105K E141S P169T",4
"lib1","SARS-CoV-2","ACTAAGAAAGCGAACA",3,1.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35H",1
"lib1","SARS-CoV-2","ACTAAGAACAAAGGAA",2,29.88,7.08,-3.68,0.38,1.5,1.22,0.04,">1 nonsynonymous","E10K Y35C F99R R127L",4
"lib1","SARS-CoV-2","ACTAAGAAGGCGCTAT",1,7.74,6,-4.76,2,3,1,0,">1 nonsynonymous","T63F N107A G146K S164H",4
"lib1","SARS-CoV-2","ACTAAGAAGTAAACGT",6,70.76,10.04,-0.73,0.1,1.97,1.04,0,">1 nonsynonymous","W106R T140Y",2
"lib1","SARS-CoV-2","ACTAAGACAAATGAAC",3,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D N13Q L60R P96Q G172L",5
"lib1","SARS-CoV-2","ACTAAGACGTTAACTA",2,27.22,10.04,-0.73,0.1,2.74,1.06,0,">1 nonsynonymous","L60R D90W",2
"lib1","SARS-CoV-2","ACTAAGAGACCATCTC",9,47.08,6.7,-4.06,0.6,1.5,1.24,0.04,">1 nonsynonymous","F126P F156N",2
"lib1","SARS-CoV-2","ACTAAGATAAACGCGA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","C6* S43N V115K N151M V173F",5
"lib1","SARS-CoV-2","ACTAAGATAATAAGCG",4,6.18,6.76,-4,0.23,2.35,1.1,0.01,">1 nonsynonymous","F47E A81R G146C",3
"lib1","SARS-CoV-2","ACTAAGATAATGACCA",1,5.64,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","ACTAAGATACAGAGAT",1,14.42,10.09,-0.68,0.16,1.97,1.06,0.03,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","ACTAAGATCAACTAAA",3,34.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25F R127V",2
"lib1","SARS-CoV-2","ACTAAGATTGACAAAA",1,18.51,10.79,0.02,0.05,2.92,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTAAGCACCCGAGGA",9,22.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y21S Y93Q",2
"lib1","SARS-CoV-2","ACTAAGCATTTTGCAA",1,9.87,10.07,-0.69,0.06,3,1,0,">1 nonsynonymous","A89H F156P",2
"lib1","SARS-CoV-2","ACTAAGCCACTCTCTA",2,73.95,9.72,-1.05,0.1,2.16,1.02,0,">1 nonsynonymous","G9S R179H T201R",3
"lib1","SARS-CoV-2","ACTAAGCCCAAAAAAA",1,0.5,NA,NA,NA,NA,NA,NA,"stop","L5S S69F N92V N120G S147*",5
"lib1","SARS-CoV-2","ACTAAGCGCTAAATAT",13,89.98,6.22,-4.55,0.67,1.5,1.21,0.02,">1 nonsynonymous","V11P S43L D98V Y119K",4
"lib1","SARS-CoV-2","ACTAAGGAAAATGACG",6,59.52,9.56,-1.2,0.14,1.8,1.2,0.01,">1 nonsynonymous","I2T C49I S200G",3
"lib1","SARS-CoV-2","ACTAAGGAATAGAGAC",4,57.55,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A22P R127A G196A",3
"lib1","SARS-CoV-2","ACTAAGGAATCAATGA",2,13.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W A22P Q84H G86T D98A G152N",6
"lib1","SARS-CoV-2","ACTAAGGCAGAATGCT",2,13.97,7.46,-3.3,0.35,1.5,1.15,0.03,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","ACTAAGGCATATCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87S N130P P149R N171Y L183*",5
"lib1","SARS-CoV-2","ACTAAGGCTTACAGAA",1,27.54,9.32,-1.44,0.16,2.06,1.11,0.01,">1 nonsynonymous","C6L G152V T201M",3
"lib1","SARS-CoV-2","ACTAAGGGCAAAGTTC",2,15.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77K Y91H L122P A145L G172S",5
"lib1","SARS-CoV-2","ACTAAGGGCATATTGC",13,111.82,7.42,-3.34,0.35,1.5,1.12,0.04,">1 nonsynonymous","G9Y V52I G86Q S139G",4
"lib1","SARS-CoV-2","ACTAAGGTCTATAGGT",7,0.66,NA,NA,NA,NA,NA,NA,"stop","V77S D90* H189L",3
"lib1","SARS-CoV-2","ACTAAGTATCACCAAA",6,61.96,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37G Y121T Q176L",3
"lib1","SARS-CoV-2","ACTAAGTATGTGAGTA",1,17.63,10.85,0.09,0.09,2.91,1.06,0,"1 nonsynonymous","N110G",1
"lib1","SARS-CoV-2","ACTAAGTCGGCTCTGT",7,48.72,10.67,-0.09,0.04,2.94,1.04,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","ACTAAGTCTAAGCGAT",4,71.09,10.7,-0.07,0.05,2.85,1.08,0,"1 nonsynonymous","N130Y",1
"lib1","SARS-CoV-2","ACTAAGTCTACAGGGA",1,21.66,11.02,0.25,0.1,2.92,1,0,">1 nonsynonymous","T3L N40R N171Y",3
"lib1","SARS-CoV-2","ACTAAGTGAAGACGGG",2,31.71,10.76,-0.01,0.08,2.96,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAAGTTCCTCTTCA",1,19.53,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","L95S L125H",2
"lib1","SARS-CoV-2","ACTAAGTTGGTTCCCT",7,110.4,9.35,-1.42,0.1,2.28,1.13,0,">1 nonsynonymous","D59C K87I A105I S164N",4
"lib1","SARS-CoV-2","ACTAATAAATATGACT",1,31.28,10.75,-0.01,0.07,2.94,1.02,0,">1 nonsynonymous","K128W T140L Q168Y",3
"lib1","SARS-CoV-2","ACTAATAACTAACACA",5,75.29,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F99S G174T L187S",3
"lib1","SARS-CoV-2","ACTAATAAGGCAACTT",3,0.75,NA,NA,NA,NA,NA,NA,"stop","A18G G83* G117*",3
"lib1","SARS-CoV-2","ACTAATAATAAAACAC",1,9.04,7.03,-3.73,0.37,1.5,1,0.03,">1 nonsynonymous","F17M V37L V71D I88S V180A",5
"lib1","SARS-CoV-2","ACTAATAATGAAACTC",5,44.77,10.36,-0.4,0.07,2.73,1.02,0,">1 nonsynonymous","S43M D90K E141I",3
"lib1","SARS-CoV-2","ACTAATACAAACACTA",1,7.52,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G9S G83M G86D V103N D137F G174F",6
"lib1","SARS-CoV-2","ACTAATACACACATGT",8,33.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28N S45T D59C Y123S F126K T148Y G155M Q163A",8
"lib1","SARS-CoV-2","ACTAATACTCGATTGC",6,1.15,NA,NA,NA,NA,NA,NA,"stop","L5T S53L C61S G152T Y175*",5
"lib1","SARS-CoV-2","ACTAATACTTCATTAC",3,40.12,10.17,-0.59,0.06,2.84,1.05,0,">1 nonsynonymous","K87F A145I A192W",3
"lib1","SARS-CoV-2","ACTAATAGAAGTCAGC",4,63.78,6.73,-4.03,0.45,1.5,1.14,0.03,">1 nonsynonymous","P7T C49G G117P",3
"lib1","SARS-CoV-2","ACTAATAGAGGAATCA",2,15.76,9.11,-1.66,0.18,1.84,1.12,0.01,">1 nonsynonymous","L38E T55N V115S",3
"lib1","SARS-CoV-2","ACTAATATAAACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14S L60* Q79P N118S C158F P169S",6
"lib1","SARS-CoV-2","ACTAATATAATCTGAT",14,25.01,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I88S N130Q E141F",3
"lib1","SARS-CoV-2","ACTAATATCAACGAAT",2,25.86,10.21,-0.56,0.17,2.61,1.01,0.01,">1 nonsynonymous","W106Y K198W",2
"lib1","SARS-CoV-2","ACTAATATGATAAGGA",4,29.21,10.44,-0.33,0.08,2.85,1,0,">1 nonsynonymous","L5R A14G",2
"lib1","SARS-CoV-2","ACTAATCACGAACAGG",7,54.03,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17R F99T",2
"lib1","SARS-CoV-2","ACTAATCCAAGTCACG",3,10.42,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","R16S I28S P82R",3
"lib1","SARS-CoV-2","ACTAATCCACATTTCA",2,23.28,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F47I P161Y",2
"lib1","SARS-CoV-2","ACTAATCCTCCTACGT",1,1.07,NA,NA,NA,NA,NA,NA,"stop","S69* S129H",2
"lib1","SARS-CoV-2","ACTAATCTAGTACATT",2,12.46,10.17,-0.6,0.09,2.9,1.03,0.01,">1 nonsynonymous","E10M C61Q K132Y",3
"lib1","SARS-CoV-2","ACTAATCTATCTAAAA",4,69.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y50C K56T Y159T",3
"lib1","SARS-CoV-2","ACTAATCTCTGGGTAT",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A P96D L183N",3
"lib1","SARS-CoV-2","ACTAATCTCTTAATAA",16,223.61,10.25,-0.51,0.04,2.84,1.04,0,">1 nonsynonymous","V37D F44Y K94A",3
"lib1","SARS-CoV-2","ACTAATCTTGACTACA",2,94.04,10.71,-0.05,0.05,2.95,1.03,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","ACTAATGAAGAGTACA",1,60.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F17N F44M A145R",3
"lib1","SARS-CoV-2","ACTAATGAATACGTGA",9,48.51,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T55C D112W Q168T",3
"lib1","SARS-CoV-2","ACTAATGAATGGCGAC",14,210.58,9.94,-0.83,0.06,2.73,1.04,0,"1 nonsynonymous","P161G",1
"lib1","SARS-CoV-2","ACTAATGACCCATATC",1,2.96,NA,NA,NA,NA,NA,NA,"stop","V37* V52I V77* D97Y",4
"lib1","SARS-CoV-2","ACTAATGATACACCTA",4,122.3,10.94,0.18,0.08,2.95,1.01,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","ACTAATGCCAGCAAAT",5,55.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S29T R124L",2
"lib1","SARS-CoV-2","ACTAATGCCCGAAGTT",6,29.17,6.21,-4.56,0.57,1.72,1.17,0.02,">1 nonsynonymous","G9A G51W C61D K87S S139I G174L",6
"lib1","SARS-CoV-2","ACTAATGCGAAATAAA",1,26.63,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y93L S113P G174F",3
"lib1","SARS-CoV-2","ACTAATGCTATGACAT",7,105.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90Y P177T",2
"lib1","SARS-CoV-2","ACTAATGGTGCTCTGT",5,54.12,8.26,-2.51,0.14,2.64,1.09,0.01,">1 nonsynonymous","P149F S164H Y175C",3
"lib1","SARS-CoV-2","ACTAATGTAAGTGACG",10,741,10.71,-0.06,0.04,2.92,1.04,0,">1 nonsynonymous","V153G F160R",2
"lib1","SARS-CoV-2","ACTAATGTAGCCTCCT",11,106.81,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F44K A89K Q168W",3
"lib1","SARS-CoV-2","ACTAATGTCCCACACG",5,82.26,8.09,-2.68,0.12,2.28,1.12,0,">1 nonsynonymous","K56D F62Y N110G K132L F160D N171D",6
"lib1","SARS-CoV-2","ACTAATTAAACGCCTG",2,42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S41H G155V",3
"lib1","SARS-CoV-2","ACTAATTATATACGTA",1,0.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","ACTAATTCTGCCGTTT",3,93.01,10.71,-0.05,0.04,2.95,1.01,0,">1 nonsynonymous","A33L I104M",2
"lib1","SARS-CoV-2","ACTAATTGGACAGACT",1,1.19,NA,NA,NA,NA,NA,NA,"stop","T85* D90L",2
"lib1","SARS-CoV-2","ACTAATTGTAACCTGC",3,43.21,10.35,-0.42,0.08,2.86,1.02,0,">1 nonsynonymous","R78L F160E",2
"lib1","SARS-CoV-2","ACTAATTGTAAGTAGC",5,44.41,10.15,-0.61,0.11,2.15,1.04,0.01,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","ACTAATTTTACCCCTT",1,23.71,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","P82M G116R F160L Y165L",4
"lib1","SARS-CoV-2","ACTAATTTTTAAACAC",3,1.45,NA,NA,NA,NA,NA,NA,"stop","N4C F17L N40S Q79M I88Y V115M S139* T201I",8
"lib1","SARS-CoV-2","ACTACAAAAACGTTGA",1,84.99,9.97,-0.79,0.11,2.41,1.03,0,"1 nonsynonymous","F47S",1
"lib1","SARS-CoV-2","ACTACAAAAATTCGAA",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E L38R",2
"lib1","SARS-CoV-2","ACTACAAAAGCCCGAT",6,81.33,10.78,0.01,0.06,2.91,1.05,0,"1 nonsynonymous","G196D",1
"lib1","SARS-CoV-2","ACTACAAAATTTAGAA",2,60.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36L E141V C150L",3
"lib1","SARS-CoV-2","ACTACAAATACCCCAA",6,0.86,NA,NA,NA,NA,NA,NA,"stop","C6* C49A L95N Y119N",4
"lib1","SARS-CoV-2","ACTACAAATGATGATC",3,68.02,10.8,0.03,0.05,2.89,1.08,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","ACTACAACAATAATAT",1,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S A33F P177H",3
"lib1","SARS-CoV-2","ACTACAACGACGCAAA",11,160.54,7.8,-2.96,0.19,1.5,1.16,0.01,">1 nonsynonymous","Y39L K56R G86L",3
"lib1","SARS-CoV-2","ACTACAATAAAGAAAC",6,0.8,NA,NA,NA,NA,NA,NA,"stop","N40E V71* S113Y",3
"lib1","SARS-CoV-2","ACTACAATAACACCAC",2,15.19,10.31,-0.46,0.11,2.83,1.03,0,">1 nonsynonymous","S45K D75H",2
"lib1","SARS-CoV-2","ACTACAATACCATGTG",2,12.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9M G117N S139W C158F",4
"lib1","SARS-CoV-2","ACTACAATCGTGGACA",2,33.04,10.84,0.08,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTACAATGACTTAGG",1,0.09,NA,NA,NA,NA,NA,NA,"stop","N4V T85K W106T E135*",4
"lib1","SARS-CoV-2","ACTACAATTCAACTCT",6,20.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D34T S69K G86C",3
"lib1","SARS-CoV-2","ACTACACAAAATCGCA",6,114.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8C L38I Y119R P161M",4
"lib1","SARS-CoV-2","ACTACACAAGTTGGGT",2,72.45,10.37,-0.4,0.05,2.85,1.07,0,">1 nonsynonymous","A22T S29V N64V",3
"lib1","SARS-CoV-2","ACTACACAGAGTGTTC",5,185.24,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31S G86H T201R",3
"lib1","SARS-CoV-2","ACTACACAGCGGGCCG",2,0.32,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","ACTACACATAAGTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* K87N G174R L183H",4
"lib1","SARS-CoV-2","ACTACACATCAAATTC",6,179.32,10.76,0,0.06,2.9,1.05,0,"1 nonsynonymous","K56A",1
"lib1","SARS-CoV-2","ACTACACCACACCACA",3,40.38,6,-4.76,1.5,3,1.08,0,">1 nonsynonymous","A18V N107I R127W R136K",4
"lib1","SARS-CoV-2","ACTACACCCAGATGCC",2,15.79,6,-4.76,2,1.5,1.16,0.04,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","ACTACACCGGTCAGAA",7,19.32,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F99T L131N S200L",3
"lib1","SARS-CoV-2","ACTACACGAAAATGCA",7,82.63,6.44,-4.32,0.37,1.5,1.21,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","ACTACACGGTAGAACT",7,1.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","ACTACACTATGCTAGA",1,26.24,8.7,-2.06,0.09,3,1,0,">1 nonsynonymous","K87M E154Y C195S",3
"lib1","SARS-CoV-2","ACTACACTTGCGAGAA",3,25.32,10.79,0.03,0.05,2.91,1.02,0,"1 nonsynonymous","A22S",1
"lib1","SARS-CoV-2","ACTACAGAAGCCTACT",5,103.02,9.57,-1.19,0.08,1.94,1.11,0,">1 nonsynonymous","N64K Q79E P149S L162M",4
"lib1","SARS-CoV-2","ACTACAGACATTCCTT",2,81.82,10.66,-0.1,0.04,2.92,1.04,0,">1 nonsynonymous","D59S V153S",2
"lib1","SARS-CoV-2","ACTACAGACCATGGCT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V G101V E141G",3
"lib1","SARS-CoV-2","ACTACAGCATAGCACA",1,31.03,10.79,0.02,0.06,3,1,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","ACTACAGCCCGGTCAA",2,125,10.55,-0.21,0.04,2.96,1,0,">1 nonsynonymous","K87T K128N",2
"lib1","SARS-CoV-2","ACTACAGCCGGTTACA",7,67.48,6,-4.76,1.01,1.5,1.29,0.01,">1 nonsynonymous","V11R S41R Q84M T100H K128Y I142L G155A",7
"lib1","SARS-CoV-2","ACTACAGGTTTTATAA",2,7.18,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","Y21C S36H C49N T55N C102P K114E T148L H189T",8
"lib1","SARS-CoV-2","ACTACAGTCACTGCCT",7,171.52,10.12,-0.64,0.06,2.82,1.04,0,"1 nonsynonymous","N107Q",1
"lib1","SARS-CoV-2","ACTACAGTGAAGAAAA",7,179.71,10.69,-0.08,0.04,2.92,1.05,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","ACTACAGTGACTTAAC",2,49.03,8.59,-2.17,0.14,2.47,1.01,0.01,">1 nonsynonymous","A145M N151Y G174V",3
"lib1","SARS-CoV-2","ACTACATAAATGCAAC",2,8.11,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","P7D V37E K48R N58A Y66E Y93K",6
"lib1","SARS-CoV-2","ACTACATATACAATCA",2,6.31,10.7,-0.07,0.17,1.9,1,0.01,"1 nonsynonymous","Y66G",1
"lib1","SARS-CoV-2","ACTACATGAAAAATGG",4,60.84,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","Y119W R124M",2
"lib1","SARS-CoV-2","ACTACATTACATAATG",4,50.33,10.8,0.04,0.07,2.88,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTACATTTCATGGGG",6,101.23,10.75,-0.01,0.06,2.94,1.02,0,"1 nonsynonymous","L187Y",1
"lib1","SARS-CoV-2","ACTACCAACATTATAT",1,0.83,NA,NA,NA,NA,NA,NA,"stop","C61L D97L Y119*",3
"lib1","SARS-CoV-2","ACTACCAAGGATTCGC",3,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P S29R P54V A89K L95H",5
"lib1","SARS-CoV-2","ACTACCAATAGAGAAT",1,24.06,9.14,-1.63,0.21,1.5,1.04,0.02,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","ACTACCACGCCACTTC",2,24.55,9.97,-0.79,0.23,2.49,1.01,0.01,">1 nonsynonymous","D34S S45K C61I",3
"lib1","SARS-CoV-2","ACTACCACGCGTGGAA",1,17.51,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I2L R136F T170M G172V",4
"lib1","SARS-CoV-2","ACTACCATTAGCCAAT",1,11.55,9.5,-1.27,0.2,2.71,1.13,0.01,">1 nonsynonymous","I2L P149T S164I K199N",4
"lib1","SARS-CoV-2","ACTACCCAAATACCAA",2,43.92,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","S45P E76I D90N",3
"lib1","SARS-CoV-2","ACTACCCATTATTAAC",3,55.83,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N1L I28A P133Y A145S G152V Q176I",6
"lib1","SARS-CoV-2","ACTACCCCACTACGCA",3,19.45,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14N V77S G146I V173M T201I",5
"lib1","SARS-CoV-2","ACTACCCCGCGGTATC",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T V153M",2
"lib1","SARS-CoV-2","ACTACCCTTATCTCAA",2,9.39,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S41L K87W Y143S L188N",4
"lib1","SARS-CoV-2","ACTACCGAGTCCTTAA",8,2.13,NA,NA,NA,NA,NA,NA,"stop","S45I A89* E154N",3
"lib1","SARS-CoV-2","ACTACCGATAAAAAGC",1,21.62,10.52,-0.25,0.1,2.87,1.07,0,">1 nonsynonymous","A81R Q168R",2
"lib1","SARS-CoV-2","ACTACCGATATACGGG",6,37.05,10.12,-0.65,0.12,2.51,1,0.01,">1 nonsynonymous","V77E L122K",2
"lib1","SARS-CoV-2","ACTACCGCCAGCCCAT",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99M R127G",2
"lib1","SARS-CoV-2","ACTACCGGATTTCCCA",2,28.91,6,-4.76,1.37,1.5,1.16,0.03,">1 nonsynonymous","N58K D90W D112K P197S",4
"lib1","SARS-CoV-2","ACTACCTAAAAGCTAA",9,55.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39F P82W C102L",3
"lib1","SARS-CoV-2","ACTACCTATCGAATTA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","A67T P161*",2
"lib1","SARS-CoV-2","ACTACCTATGAACGTA",1,6.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G D68Q K94Y",3
"lib1","SARS-CoV-2","ACTACCTCAATCTGTT",1,43.54,8.76,-2.01,0.09,2.91,1.07,0,">1 nonsynonymous","F44L Q168L",2
"lib1","SARS-CoV-2","ACTACGAAATAGTTCC",4,55.45,10.4,-0.36,0.07,2.84,1,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","ACTACGAACAACTAAA",2,44.3,8.44,-2.33,0.18,1.75,1.07,0.01,">1 nonsynonymous","I2F Y165S",2
"lib1","SARS-CoV-2","ACTACGACAAATAACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D A89W L95H N130V",4
"lib1","SARS-CoV-2","ACTACGACATCATACA",4,17.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43Y F62D L131R F167S V182A",5
"lib1","SARS-CoV-2","ACTACGACCCTAGAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","C150S N157S S164* T170C",4
"lib1","SARS-CoV-2","ACTACGACCGCTATTC",1,6.36,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G9W Y66P P96S D137G",4
"lib1","SARS-CoV-2","ACTACGACGGATATAA",1,4.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","ACTACGACTGGCATTA",7,82.04,8.95,-1.81,0.06,2.67,1.13,0,">1 nonsynonymous","G116R E135G F160Y T170N",4
"lib1","SARS-CoV-2","ACTACGAGCAGGTAAA",2,19.73,10.24,-0.52,0.24,2.34,1,0.04,">1 nonsynonymous","N13R K48E A89C F167V",4
"lib1","SARS-CoV-2","ACTACGAGGCAAGGCA",1,58.49,8.49,-2.28,0.18,2.28,1.15,0.01,">1 nonsynonymous","K56V Y119G R136L",3
"lib1","SARS-CoV-2","ACTACGATATAAAATA",7,171.82,10.76,0,0.08,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTACGATCTCTTTCC",5,135.78,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S45T N58L V77M Y91R G117Q Q176Y T201D",7
"lib1","SARS-CoV-2","ACTACGCAATCCGTCA",4,0,NA,NA,NA,NA,NA,NA,"stop","C31S V77W G83* Y91I D137L N151L Y178N",7
"lib1","SARS-CoV-2","ACTACGCAGCAACTAA",10,5.23,NA,NA,NA,NA,NA,NA,"stop","K87* Y165D",2
"lib1","SARS-CoV-2","ACTACGCATAAATGAT",3,60.84,10.58,-0.18,0.04,2.93,1.05,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","ACTACGCCAACTTTAC",1,7.41,8.96,-1.8,0.18,2.71,1,0.01,">1 nonsynonymous","A14S K56L K87D E141T",4
"lib1","SARS-CoV-2","ACTACGCCATAGACTA",7,53.41,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y50N E76S G146K P161S",4
"lib1","SARS-CoV-2","ACTACGCCTGCTATCA",3,146.71,10.18,-0.59,0.08,2.58,1.02,0,"1 nonsynonymous","R25S",1
"lib1","SARS-CoV-2","ACTACGCTAGAACCGG",5,0.58,NA,NA,NA,NA,NA,NA,"stop","C6* K132* C158G",3
"lib1","SARS-CoV-2","ACTACGGAACGTTAAA",2,12.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48D F99R E141T",3
"lib1","SARS-CoV-2","ACTACGGACTTCACTA",4,28.18,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","C6P K94F T201L",3
"lib1","SARS-CoV-2","ACTACGGATAAAAGCA",15,2.54,NA,NA,NA,NA,NA,NA,"stop","Y35V L60* N151V",3
"lib1","SARS-CoV-2","ACTACGTCAGGCAGGC",11,76.96,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","D68K I88F G174T",3
"lib1","SARS-CoV-2","ACTACTAAGGACAATG",7,28.76,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","Y143M V181D",2
"lib1","SARS-CoV-2","ACTACTACGAGTTTTT",1,14.06,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","D112G Y119I",2
"lib1","SARS-CoV-2","ACTACTACGCAATCTT",1,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121K C150L P169M",3
"lib1","SARS-CoV-2","ACTACTACGTCTTTTC",11,241.97,10.6,-0.16,0.03,2.95,1.01,0,">1 nonsynonymous","G83F D90K",2
"lib1","SARS-CoV-2","ACTACTACTTGCGGGT",2,14.63,6,-4.76,2,1.5,1.35,0.07,">1 nonsynonymous","S41E G51C V77P",3
"lib1","SARS-CoV-2","ACTACTATAAGATAGC",2,69.16,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S41G D90E D97C F156T P177L",5
"lib1","SARS-CoV-2","ACTACTATCGATGTTT",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R Y50L I88W T140S Q163I",5
"lib1","SARS-CoV-2","ACTACTATGTACGCAT",1,31.68,10.5,-0.26,0.08,2.95,1,0,">1 nonsynonymous","E135G Q168S",2
"lib1","SARS-CoV-2","ACTACTATGTATATTG",5,93.11,10.78,0.02,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTACTATTATTTTGC",6,51.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y66P N107A N120S K128R T201L",5
"lib1","SARS-CoV-2","ACTACTATTTATACAT",3,46.76,8.78,-1.99,0.11,2.78,1.08,0.01,">1 nonsynonymous","P7V Y119P P149K",3
"lib1","SARS-CoV-2","ACTACTCATAATAAAA",5,50.68,10.65,-0.11,0.06,2.92,1.02,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","ACTACTCCACAAATAA",2,25.64,10.78,0.01,0.09,2.99,1,0,"1 nonsynonymous","N40T",1
"lib1","SARS-CoV-2","ACTACTCCAGAAAGGT",13,89.74,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","I28M S43C V52K N107Y N130I F134V",6
"lib1","SARS-CoV-2","ACTACTCGAGTCAGTT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","R25W N58D G86*",3
"lib1","SARS-CoV-2","ACTACTCGCACAATAG",6,55.82,9.51,-1.26,0.22,1.5,1.04,0.02,">1 nonsynonymous","I28T D97E T140Y",3
"lib1","SARS-CoV-2","ACTACTCGCCAATGTT",2,14.35,10.24,-0.52,0.09,2.88,1.04,0.01,"1 nonsynonymous","C6V",1
"lib1","SARS-CoV-2","ACTACTGAAATAGGGA",3,89.4,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F99C P169V V173T",3
"lib1","SARS-CoV-2","ACTACTGAGACCGAAG",8,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66S D97G",2
"lib1","SARS-CoV-2","ACTACTGATCTGGTTA",4,54.85,8.9,-1.87,0.11,2.75,1.1,0.01,">1 nonsynonymous","I28C Y119T",2
"lib1","SARS-CoV-2","ACTACTGTAGACTTTT",12,103.24,6.28,-4.49,0.4,1.5,1.16,0.01,">1 nonsynonymous","D112A F156Y",2
"lib1","SARS-CoV-2","ACTACTGTGTACCCGA",8,96.31,10.39,-0.37,0.04,2.93,1.02,0,"1 nonsynonymous","N13R",1
"lib1","SARS-CoV-2","ACTACTTAGGGGAATG",6,33,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12N D68Q A89S",3
"lib1","SARS-CoV-2","ACTACTTCGGAACATT",5,68.17,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N40S T46S V77E A89N T100M G146P G155A",7
"lib1","SARS-CoV-2","ACTACTTCTTCCAATT",2,1.35,NA,NA,NA,NA,NA,NA,"stop","A89R C150*",2
"lib1","SARS-CoV-2","ACTACTTGCGGGTGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* N64Y",2
"lib1","SARS-CoV-2","ACTACTTGGTATTTAA",2,22.89,8.29,-2.47,0.25,1.5,1.21,0.03,">1 nonsynonymous","L5K W23L N130S N171T T201R",5
"lib1","SARS-CoV-2","ACTAGAAAAAATGGGC",1,12.43,6.81,-3.96,0.7,1.5,1.06,0.07,">1 nonsynonymous","Y39S N64R A105T Y119S S129P C150N",6
"lib1","SARS-CoV-2","ACTAGAAACTGAACGT",4,60.37,10.81,0.04,0.08,2.91,1.08,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","ACTAGAAACTTGGATA",12,169.7,9.71,-1.05,0.11,1.87,1.08,0,">1 nonsynonymous","K48L D59A Y66F L162M V173I",5
"lib1","SARS-CoV-2","ACTAGAAATTGATAAT",2,1.48,NA,NA,NA,NA,NA,NA,"stop","Q84H D90* Y143S",3
"lib1","SARS-CoV-2","ACTAGAACCTAACGAG",3,19.25,6,-4.76,2,2.03,1.15,0.02,">1 nonsynonymous","S36F F62A D97E L125Y R127H",5
"lib1","SARS-CoV-2","ACTAGAACGCAAAATG",7,63.7,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S36R A145Y L162S",3
"lib1","SARS-CoV-2","ACTAGAAGACATTCTT",2,120.15,8.67,-2.1,0.08,2.67,1.07,0,">1 nonsynonymous","S29T L57G Y119S",3
"lib1","SARS-CoV-2","ACTAGAAGGCAATAAA",2,47.53,7.43,-3.33,0.35,1.5,1.1,0.05,">1 nonsynonymous","Y66K P177L",2
"lib1","SARS-CoV-2","ACTAGAATAAAGTTAA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y E141V P161T",3
"lib1","SARS-CoV-2","ACTAGAATAACAGACG",3,67.59,10.66,-0.1,0.07,2.92,1.03,0,">1 nonsynonymous","E141R P149S",2
"lib1","SARS-CoV-2","ACTAGAATCCCATTCA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q G83L A105P R124S F134C",5
"lib1","SARS-CoV-2","ACTAGACACGGGCCCG",15,188.98,10.75,-0.01,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGACACGTTTGTT",3,45.05,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K56C G74Q A145N",3
"lib1","SARS-CoV-2","ACTAGACATAAAGAGT",3,16.52,10.75,-0.01,0.1,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGACCAATTCAGG",10,28.04,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y35R I104N N130T",3
"lib1","SARS-CoV-2","ACTAGACCAATTTTGC",6,164.13,10.77,0,0.08,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGACGCCAGCAGC",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21R K56V V77L T148P L162M",5
"lib1","SARS-CoV-2","ACTAGACGCTGTGGGC",5,28.41,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N1E D90K R127P G172R",4
"lib1","SARS-CoV-2","ACTAGACGTGCGCGGA",1,22.35,9.32,-1.45,0.15,1.95,1.01,0.01,">1 nonsynonymous","A42K P54N A81K K128C T201L",5
"lib1","SARS-CoV-2","ACTAGAGAATTTCCTA",3,78.65,8.62,-2.14,0.09,2.58,1.11,0,">1 nonsynonymous","N4T S113K H189R",3
"lib1","SARS-CoV-2","ACTAGAGCCGTGACAT",1,11.96,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N4V G51P Y143G T148A",4
"lib1","SARS-CoV-2","ACTAGAGCTTGATAAC",10,203.29,10.72,-0.04,0.06,2.78,1.15,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","ACTAGAGTTTGGTATT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71E I88T P161Y",3
"lib1","SARS-CoV-2","ACTAGATAGTTCCCAG",2,5.15,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S45N V77M N120I L162A",4
"lib1","SARS-CoV-2","ACTAGATATGTGCCAG",2,12.41,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","T3I Y21L R127V",3
"lib1","SARS-CoV-2","ACTAGATCAATTAATA",3,3.86,NA,NA,NA,NA,NA,NA,"stop","E10* N107S Y175C Y178S",4
"lib1","SARS-CoV-2","ACTAGATTATCAAGTA",6,0.36,NA,NA,NA,NA,NA,NA,"stop","R16* E186H",2
"lib1","SARS-CoV-2","ACTAGATTTAATACAT",1,13.08,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Y91S N171K",2
"lib1","SARS-CoV-2","ACTAGATTTGATAATG",1,15.23,10.22,-0.54,0.1,2.78,1.08,0.01,">1 nonsynonymous","R27H D90Y Y175F",3
"lib1","SARS-CoV-2","ACTAGCAAACCTCTAA",1,13.44,9.98,-0.79,0.15,1.97,1.09,0.01,">1 nonsynonymous","I104G L188I T201S",3
"lib1","SARS-CoV-2","ACTAGCAAATTAAACG",4,29.73,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","T3P S41H L60T G74F F99R A105M G155L",7
"lib1","SARS-CoV-2","ACTAGCAATGTACTTA",2,18.39,10.68,-0.08,0.06,3,1.01,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","ACTAGCACCGAGGCGT",8,63.58,9.97,-0.79,0.12,2.31,1.01,0.01,">1 nonsynonymous","N110D Y123L Y143L",3
"lib1","SARS-CoV-2","ACTAGCAGAAGGGGTG",4,56.88,9.73,-1.04,0.08,2.35,1.06,0,">1 nonsynonymous","L60Y Y66K D90Y",3
"lib1","SARS-CoV-2","ACTAGCATATCATCTA",5,55.74,10.03,-0.73,0.12,2.64,1.01,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","ACTAGCCAATATGAGG",2,26.07,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","A89E R136N",2
"lib1","SARS-CoV-2","ACTAGCCAGCGGATCA",1,22.12,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P82W A89G",2
"lib1","SARS-CoV-2","ACTAGCCATAGTAGAG",10,205.58,9.18,-1.59,0.17,1.5,1.02,0.01,">1 nonsynonymous","A18V V37L S45F K56L",4
"lib1","SARS-CoV-2","ACTAGCCCATCTATCC",7,39.97,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88R S139W",2
"lib1","SARS-CoV-2","ACTAGCCGAAATCAAG",2,20.71,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D98F W106L S129N I138Q Q176S",5
"lib1","SARS-CoV-2","ACTAGCGAAAAAGTCA",1,5.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105P",1
"lib1","SARS-CoV-2","ACTAGCGAAAAATAGT",13,410.8,10.75,-0.01,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGCGAGTTGCAGA",2,97.66,10.01,-0.75,0.1,2.22,1.08,0,">1 nonsynonymous","A14V S29V L60R P197C",4
"lib1","SARS-CoV-2","ACTAGCGTAACGTATT",3,140.55,10.78,0.01,0.07,2.87,1.07,0,"1 nonsynonymous","S200N",1
"lib1","SARS-CoV-2","ACTAGCGTGTACCTCC",12,385.71,10.82,0.05,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGCTATAAAACGT",2,34.63,10.7,-0.06,0.04,2.87,1.06,0,">1 nonsynonymous","S43F C61P",2
"lib1","SARS-CoV-2","ACTAGCTTATCTAAGC",3,27.64,10.69,-0.08,0.04,2.96,1,0,">1 nonsynonymous","G9R F62P",2
"lib1","SARS-CoV-2","ACTAGCTTCTTAAAAT",3,11.05,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","S43F Y91P D97M V103Q K128M",5
"lib1","SARS-CoV-2","ACTAGGAAACGTAATT",1,8.87,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F12V L60P G101V G117C D137T V173L H189T",7
"lib1","SARS-CoV-2","ACTAGGACAAAGATTT",7,101.48,10.56,-0.2,0.07,2.83,1.01,0,">1 nonsynonymous","A105S S129I",2
"lib1","SARS-CoV-2","ACTAGGACCGGAGTAC",2,11.67,6,-4.76,1.06,3,1.16,0.01,">1 nonsynonymous","I2Q L95P C102N",3
"lib1","SARS-CoV-2","ACTAGGAGTAGTGAAA",2,85.36,10.21,-0.56,0.08,2.61,1.01,0,">1 nonsynonymous","N64Q C102I",2
"lib1","SARS-CoV-2","ACTAGGATATTTTCCC",1,0.52,NA,NA,NA,NA,NA,NA,"stop","S45* D59N F62C V77H A145G",5
"lib1","SARS-CoV-2","ACTAGGATGAACATGA",4,77.38,10.07,-0.69,0.04,2.81,1,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","ACTAGGATGATATAGC",7,24.74,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C49V V103P Q168K",3
"lib1","SARS-CoV-2","ACTAGGCATATAGCAT",1,71.6,9.28,-1.48,0.1,2.72,1.13,0,">1 nonsynonymous","T46I T55Y Q176H",3
"lib1","SARS-CoV-2","ACTAGGCCAATCAAAA",3,33.73,10.61,-0.16,0.06,2.97,1,0,">1 nonsynonymous","S29A D97H C195R",3
"lib1","SARS-CoV-2","ACTAGGCCATATGTAA",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N T46M G51L L60G A89L Y119P",6
"lib1","SARS-CoV-2","ACTAGGCCGTAGGTGG",4,143.96,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86E S129I Y165R Q176V",4
"lib1","SARS-CoV-2","ACTAGGGATTGATTCT",2,32.03,7.75,-3.01,0.21,1.68,1.13,0.01,">1 nonsynonymous","T55D Y123L F167L",3
"lib1","SARS-CoV-2","ACTAGGGCCGACTTAC",3,83.26,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","L5A A14R I28E A42S G86F D97Y N120K L187D",8
"lib1","SARS-CoV-2","ACTAGGGTGCTCTATT",1,16.31,10.72,-0.04,0.09,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGGTAAATCATCA",1,47.16,10.7,-0.07,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTAGGTCCGGATAGT",6,53.67,6,-4.76,0.83,1.5,1.1,0.01,">1 nonsynonymous","P82D S139L",2
"lib1","SARS-CoV-2","ACTAGGTTAAATTCTG",6,110.29,10.16,-0.61,0.04,2.79,1.04,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","ACTAGGTTCGTATGGC",2,0.07,NA,NA,NA,NA,NA,NA,"stop","A18T F44C C61N G101*",4
"lib1","SARS-CoV-2","ACTAGTAAACTCATAC",5,14.51,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G86I R124T N130H E154G E186V",5
"lib1","SARS-CoV-2","ACTAGTACACAGGAAA",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H D90L N118Y",3
"lib1","SARS-CoV-2","ACTAGTAGCAGATAAA",3,23.55,10.34,-0.43,0.09,2.8,1.13,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","ACTAGTATAGGATCTT",1,44.06,10.46,-0.3,0.07,2.87,1.04,0,">1 nonsynonymous","D90Y V153L",2
"lib1","SARS-CoV-2","ACTAGTATTACGACGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60E I138R",2
"lib1","SARS-CoV-2","ACTAGTCACGGGCTGT",2,10.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V11D N58I C150F S184P",4
"lib1","SARS-CoV-2","ACTAGTCCGCGCAACC",2,17.12,10.67,-0.1,0.06,2.82,1.13,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","ACTAGTCCTGCACACA",4,0,NA,NA,NA,NA,NA,NA,"stop","P82* R127*",2
"lib1","SARS-CoV-2","ACTAGTCCTGTTATAA",4,28.98,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N4F I88F L125C N157M T170V",5
"lib1","SARS-CoV-2","ACTAGTGACATTGATT",1,0.79,NA,NA,NA,NA,NA,NA,"stop","S43P F62* G117S",3
"lib1","SARS-CoV-2","ACTAGTGGAAAGATAG",7,40.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S19M A42K G166N F185N",4
"lib1","SARS-CoV-2","ACTAGTGGCGGGTGAC",1,12.81,10.55,-0.22,0.08,2.93,1,0,"1 nonsynonymous","F62G",1
"lib1","SARS-CoV-2","ACTAGTGGTAAATAAG",2,50.75,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","E10V N107I P161T",3
"lib1","SARS-CoV-2","ACTAGTGTATACCATT",5,37.46,10.66,-0.1,0.05,2.87,1.07,0,">1 nonsynonymous","T100R L125M",2
"lib1","SARS-CoV-2","ACTAGTGTGGTTAAAT",3,5.11,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","T3V V20G V52C Y93S V103N Y119F",6
"lib1","SARS-CoV-2","ACTAGTTAATAAAAAG",6,99.97,9.85,-0.91,0.12,2.23,1.04,0.01,">1 nonsynonymous","C6L S41W T100L",3
"lib1","SARS-CoV-2","ACTAGTTACTGAAAGA",1,17.17,9.79,-0.98,0.19,2.42,1,0.02,">1 nonsynonymous","G9V S45C S200C",3
"lib1","SARS-CoV-2","ACTAGTTGAGCTGTTG",2,28,8.48,-2.28,0.23,1.5,1.05,0.02,">1 nonsynonymous","G86N V173I V180I",3
"lib1","SARS-CoV-2","ACTAGTTGATCTGACA",4,132.76,10.83,0.06,0.08,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATAAAATTCATAT",1,70.7,6.02,-4.75,1.17,1.5,1.21,0.02,">1 nonsynonymous","D98F K132W Q176H",3
"lib1","SARS-CoV-2","ACTATAAAATTTTGGC",6,1.41,NA,NA,NA,NA,NA,NA,"stop","L5D K48L N58D C61Y K199*",5
"lib1","SARS-CoV-2","ACTATAAACAAAGTCA",3,506.7,10.74,-0.02,0.04,2.94,1.02,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ACTATAAAGACCATAA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","S41* F99H C102L T140Y",4
"lib1","SARS-CoV-2","ACTATAAAGAGGCTGT",3,65.59,10.21,-0.56,0.08,2.69,1,0,">1 nonsynonymous","G9W S45C",2
"lib1","SARS-CoV-2","ACTATAAAGGCTAATC",11,3.55,NA,NA,NA,NA,NA,NA,"stop","K87H L122T F185Y K198*",4
"lib1","SARS-CoV-2","ACTATAAATTCCCCGA",3,82.01,8.17,-2.6,0.33,1.5,1.2,0.04,">1 nonsynonymous","K48R A81H E141S Q176M",4
"lib1","SARS-CoV-2","ACTATAAATTTTAAAA",2,10.83,10.55,-0.21,0.06,2.98,1.02,0,">1 nonsynonymous","G9E I104A",2
"lib1","SARS-CoV-2","ACTATAACACGATAAT",5,83.45,10.71,-0.05,0.07,2.93,1.04,0,">1 nonsynonymous","L122Y K132R",2
"lib1","SARS-CoV-2","ACTATAACATAATAAG",12,128.8,9.74,-1.02,0.05,2.8,1.06,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","ACTATAACTGCAGTTA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","D68L D90F Y91N R136* S200E",5
"lib1","SARS-CoV-2","ACTATAAGAATTAATT",1,20.2,6,-4.76,1.73,3,1.08,0,">1 nonsynonymous","P82Y G152I",2
"lib1","SARS-CoV-2","ACTATAAGAGGGCGTA",1,122.6,6.62,-4.14,0.24,1.64,1.12,0.01,">1 nonsynonymous","N4I Q176D",2
"lib1","SARS-CoV-2","ACTATAAGGAGAATTT",1,48.29,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G83L A89R G166R",3
"lib1","SARS-CoV-2","ACTATAAGGCCAACCA",1,21,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P96L G152P Y159F",3
"lib1","SARS-CoV-2","ACTATAAGGCGGCATC",3,14.25,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G101S V173D",2
"lib1","SARS-CoV-2","ACTATAAGGTAAATGT",2,5.18,6,-4.76,2,3,1.05,0,">1 nonsynonymous","A105K E135S F160V",3
"lib1","SARS-CoV-2","ACTATAAGTCAGATAA",5,36.93,6.04,-4.72,0.86,1.5,1.16,0.01,">1 nonsynonymous","V71W K87M G155L",3
"lib1","SARS-CoV-2","ACTATAAGTGTTTAAC",3,55.3,8.72,-2.04,0.22,1.5,1.13,0.02,">1 nonsynonymous","L5M F12L C61L Y165F",4
"lib1","SARS-CoV-2","ACTATAATAGAACTCA",4,44.95,10.78,0.01,0.06,2.93,1.03,0,">1 nonsynonymous","L5V S36Q",2
"lib1","SARS-CoV-2","ACTATAATCGACAAAC",2,16.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35F P82C F167S",3
"lib1","SARS-CoV-2","ACTATAATGATTTTTG",1,41,8.38,-2.38,0.14,2.04,1.08,0.01,">1 nonsynonymous","L5G R73L T148W",3
"lib1","SARS-CoV-2","ACTATAATGCAAAATA",2,1.05,NA,NA,NA,NA,NA,NA,"stop","L60* I72L",2
"lib1","SARS-CoV-2","ACTATAATGTTGAAAA",4,21.57,8.9,-1.86,0.12,2.37,1.15,0.01,">1 nonsynonymous","G146F N151L",2
"lib1","SARS-CoV-2","ACTATAATTTCAAACC",19,292.67,10.62,-0.15,0.04,2.9,1.03,0,">1 nonsynonymous","L5R S36G L131V",3
"lib1","SARS-CoV-2","ACTATACAACATCGAC",3,22.87,9.56,-1.21,0.12,1.86,1.14,0.01,">1 nonsynonymous","T55F T63V D90V",3
"lib1","SARS-CoV-2","ACTATACAACCCTATA",4,43.7,10.47,-0.29,0.05,2.87,1.09,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","ACTATACAATAGACTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180R",1
"lib1","SARS-CoV-2","ACTATACACAGGGGGT",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84K Y93M T148I G172K",4
"lib1","SARS-CoV-2","ACTATACACGACAACT",3,29.42,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8K F99L N120L S139N",4
"lib1","SARS-CoV-2","ACTATACAGATTTAAA",6,1.94,NA,NA,NA,NA,NA,NA,"stop","E10G A67V R136*",3
"lib1","SARS-CoV-2","ACTATACAGATTTAGG",4,9.4,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","N1V P96R F167P",3
"lib1","SARS-CoV-2","ACTATACATAAATTAA",10,51.31,6,-4.76,0.76,1.5,1.1,0,">1 nonsynonymous","P96R Q144S P161R",3
"lib1","SARS-CoV-2","ACTATACATACTAAAC",3,64.6,7.42,-3.34,0.17,1.6,1.1,0.01,">1 nonsynonymous","G9A C150S",2
"lib1","SARS-CoV-2","ACTATACATGGACATG",3,69.58,10.75,-0.01,0.06,2.94,1.02,0,">1 nonsynonymous","V37G K199D",2
"lib1","SARS-CoV-2","ACTATACCAGAATTAA",2,7.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15A L57D D98W",3
"lib1","SARS-CoV-2","ACTATACGATACTATA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I A42Y I104T F167Y",4
"lib1","SARS-CoV-2","ACTATACTCAACGTGA",7,124.19,6,-4.76,1.46,1.5,1.17,0.01,">1 nonsynonymous","V32M K48W I138N P149N T170L",5
"lib1","SARS-CoV-2","ACTATAGAACCTCCTT",3,60.69,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F44P Y175V R179V",3
"lib1","SARS-CoV-2","ACTATAGAATACTGAT",5,32.94,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N107Y P149S",2
"lib1","SARS-CoV-2","ACTATAGACGGATTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E F44E Y66T N171G",4
"lib1","SARS-CoV-2","ACTATAGATAAATGGT",2,26.5,8.55,-2.21,0.16,2.76,1.05,0.01,">1 nonsynonymous","N13G N157H K199Y",3
"lib1","SARS-CoV-2","ACTATAGCCGTTATGT",6,35.04,7.94,-2.83,0.39,1.5,1.13,0.05,">1 nonsynonymous","L60Y P82S N120S F160T",4
"lib1","SARS-CoV-2","ACTATAGTGACAAATA",2,66.67,9.6,-1.17,0.14,1.83,1.09,0.01,">1 nonsynonymous","K26A P133L",2
"lib1","SARS-CoV-2","ACTATAGTGACGAGTG",2,8.31,10.81,0.04,0.21,2.72,1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ACTATAGTTAAAGGAA",3,54.6,10.71,-0.05,0.1,2.83,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATATAACGCATAT",2,9.2,6.05,-4.71,1.12,1.5,1.24,0.03,">1 nonsynonymous","V77M L95S G152L",3
"lib1","SARS-CoV-2","ACTATATACATACGAT",5,50.61,10.71,-0.06,0.09,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTATATATATAGTTG",4,82.48,9.95,-0.81,0.09,2.33,1.08,0,">1 nonsynonymous","F44D V77M",2
"lib1","SARS-CoV-2","ACTATATATATTGGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","F99* F156Q",2
"lib1","SARS-CoV-2","ACTATATCGGGGAACC",2,16.47,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S36W F47V L131E",3
"lib1","SARS-CoV-2","ACTATATCTTGGATCT",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q Y50D C102Y R136P T201L",5
"lib1","SARS-CoV-2","ACTATATGAGCCCGCA",4,79.83,8.69,-2.07,0.15,2.08,1.12,0.01,">1 nonsynonymous","F8L N58L I142E",3
"lib1","SARS-CoV-2","ACTATATGGAATGCAG",8,218.11,10.76,-0.01,0.07,2.86,1.09,0,"1 nonsynonymous","S147R",1
"lib1","SARS-CoV-2","ACTATCAAAACATTCA",4,50.96,10.79,0.03,0.06,2.95,1.04,0,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","ACTATCAAGATCACCG",7,58.79,7.31,-3.46,0.33,1.5,1.13,0.03,">1 nonsynonymous","N92Q T100L",2
"lib1","SARS-CoV-2","ACTATCAATCATATGT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","G9T T46F T55* P149S K199T",5
"lib1","SARS-CoV-2","ACTATCAATGCTAAGT",1,11.85,6.07,-4.69,0.6,2.61,1.17,0.01,">1 nonsynonymous","C102R F134K F160I T170L",4
"lib1","SARS-CoV-2","ACTATCAATTGACTCA",1,5.48,6,-4.76,2,3,1.02,0,">1 nonsynonymous","D90R K114Q R124H A145S",4
"lib1","SARS-CoV-2","ACTATCACAACTCTAT",1,5.3,9.92,-0.85,0.25,2.01,1.05,0.03,">1 nonsynonymous","C6N G83Y D98H N110M",4
"lib1","SARS-CoV-2","ACTATCACAATGAGTG",11,177.44,10.84,0.07,0.07,2.92,1.04,0,"1 nonsynonymous","K128D",1
"lib1","SARS-CoV-2","ACTATCACGCAAGTTT",8,74.32,10.85,0.08,0.07,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATCACTACGATTG",13,12.32,NA,NA,NA,NA,NA,NA,"stop","F44V Y91* Q176H",3
"lib1","SARS-CoV-2","ACTATCAGACTCGGAC",2,36.95,10.26,-0.5,0.09,2.75,1.07,0,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","ACTATCATAATCTGAC",5,53.38,10.37,-0.39,0.06,2.79,1.1,0,">1 nonsynonymous","T3S F47C E154R",3
"lib1","SARS-CoV-2","ACTATCATACTGCGGA",7,10.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5G T15V F44V C61F D68V L122F",6
"lib1","SARS-CoV-2","ACTATCATCTAAACAA",1,74.38,10.02,-0.74,0.07,2.46,1.03,0,">1 nonsynonymous","C61W D90H",2
"lib1","SARS-CoV-2","ACTATCATTATGTCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59S G86L Y91V D98* L125S E135R",6
"lib1","SARS-CoV-2","ACTATCCACAGATTCC",7,100.7,10.37,-0.39,0.03,2.92,1,0,">1 nonsynonymous","D90E K94N L125M",3
"lib1","SARS-CoV-2","ACTATCCATGGACATT",3,43.95,9.9,-0.86,0.08,2.36,1.05,0,">1 nonsynonymous","L57R E141T",2
"lib1","SARS-CoV-2","ACTATCCCAGGCATTA",3,15.13,9.85,-0.92,0.16,2.3,1.23,0.01,"1 nonsynonymous","F47S",1
"lib1","SARS-CoV-2","ACTATCCCATATTACT",1,64.3,10.38,-0.38,0.06,2.87,1.08,0,">1 nonsynonymous","T140R F156L",2
"lib1","SARS-CoV-2","ACTATCCCCGATTCCT",3,54.83,6.98,-3.78,0.31,1.5,1.14,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","ACTATCCCCGGCAAAC",2,40.49,8.21,-2.56,0.27,1.98,1.19,0.03,">1 nonsynonymous","K94L L125N C195Y",3
"lib1","SARS-CoV-2","ACTATCCGGTGTATTG",7,193.05,9.05,-1.71,0.06,2.8,1.1,0,">1 nonsynonymous","N1I G117E",2
"lib1","SARS-CoV-2","ACTATCCTGTAAAGAA",11,2.35,NA,NA,NA,NA,NA,NA,"stop","E10* C61V A89T",3
"lib1","SARS-CoV-2","ACTATCCTTTTCTATA",5,10.22,10.24,-0.52,0.07,2.95,1,0,">1 nonsynonymous","D90W N151L",2
"lib1","SARS-CoV-2","ACTATCGACCCTCCCG",9,85.18,6,-4.76,1.92,1.5,1.16,0.01,">1 nonsynonymous","S36L L60A D68P N151L S184L",5
"lib1","SARS-CoV-2","ACTATCGATCCTCTTA",1,16.62,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","T3H Y50M I88S E141Y",4
"lib1","SARS-CoV-2","ACTATCGCTCCATTGT",4,25.75,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F8L C61K Y121V S147R F167T",5
"lib1","SARS-CoV-2","ACTATCGGAAATGTTG",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A P54Q G117Q L125G P133V G172C",6
"lib1","SARS-CoV-2","ACTATCGTATTTTTAT",4,78.72,10.31,-0.46,0.06,2.96,1.01,0,">1 nonsynonymous","C61N D90C",2
"lib1","SARS-CoV-2","ACTATCTAAATTGCAA",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P P82M Q84R N118S",4
"lib1","SARS-CoV-2","ACTATCTATACCTTAA",2,2.04,NA,NA,NA,NA,NA,NA,"stop","L38H G174*",2
"lib1","SARS-CoV-2","ACTATCTCAGAACATA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","S41Y F47* N58S P197*",4
"lib1","SARS-CoV-2","ACTATCTGATTATAAA",3,124.85,7.97,-2.79,0.13,2.04,1.11,0.01,">1 nonsynonymous","C31D T46H Y175Q",3
"lib1","SARS-CoV-2","ACTATCTGCTGTTATC",3,54.53,7.04,-3.73,0.4,1.5,1.17,0.03,">1 nonsynonymous","N13F K26G L38F Y121F L131C",5
"lib1","SARS-CoV-2","ACTATGAAAAATGGTA",3,5.13,NA,NA,NA,NA,NA,NA,"stop","T3* G86M K128G P177S K198H",5
"lib1","SARS-CoV-2","ACTATGAAGTCACTTG",1,45.04,10.33,-0.43,0.08,2.9,1.03,0,">1 nonsynonymous","D97F V103I",2
"lib1","SARS-CoV-2","ACTATGAATTGAAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T F134N R179S A190G",4
"lib1","SARS-CoV-2","ACTATGACAACGGTTC",4,16,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","R25N G83Y G146F F160M F167L",5
"lib1","SARS-CoV-2","ACTATGACGCTTGTAA",5,93.93,10.66,-0.1,0.04,2.92,1.05,0,">1 nonsynonymous","S29C P149K",2
"lib1","SARS-CoV-2","ACTATGATCATAAACC",5,21.47,10.57,-0.19,0.12,2.9,1.04,0.01,">1 nonsynonymous","S43V Y123M",2
"lib1","SARS-CoV-2","ACTATGATCCCCATCA",3,21.49,6,-4.76,1.07,1.5,1.15,0.01,">1 nonsynonymous","V11N T55I I104H D112K T140L G152L",6
"lib1","SARS-CoV-2","ACTATGATCTGATAAA",6,34.4,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N120M R127W",2
"lib1","SARS-CoV-2","ACTATGATGCGATATT",1,77.63,9.85,-0.92,0.1,1.9,1.08,0,">1 nonsynonymous","Y91K L122R S129R Y178L",4
"lib1","SARS-CoV-2","ACTATGATTAAAACTG",2,18.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3G D137L E141Q",3
"lib1","SARS-CoV-2","ACTATGATTAAACAAG",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K I28K K48V K94A",4
"lib1","SARS-CoV-2","ACTATGCAAACCACAG",9,54.55,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L57S Y121D P133T Y165P",4
"lib1","SARS-CoV-2","ACTATGCAGATGTAAA",4,17.02,6.84,-3.93,0.42,1.5,1.08,0.05,">1 nonsynonymous","C6D C49L K87R N171G",4
"lib1","SARS-CoV-2","ACTATGCCAGAGAAAA",2,51.84,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12N A22E F99L",3
"lib1","SARS-CoV-2","ACTATGCGTCGGGGAC",11,103.03,10.84,0.08,0.09,2.82,1.11,0,">1 nonsynonymous","I2H L122A",2
"lib1","SARS-CoV-2","ACTATGCTATCAACCG",1,0.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","ACTATGGACCTGGCAT",2,24.48,9.92,-0.85,0.05,2.8,1.04,0,">1 nonsynonymous","C6A S41D N151L",3
"lib1","SARS-CoV-2","ACTATGGACCTTATAA",7,110.25,10.28,-0.48,0.04,2.88,1.04,0,">1 nonsynonymous","F44I K87Y N120R P149L",4
"lib1","SARS-CoV-2","ACTATGGACTGCACCT",3,33.8,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G86I I142L",2
"lib1","SARS-CoV-2","ACTATGGAGTGACATG",2,99.46,10.59,-0.18,0.04,2.94,1.01,0,">1 nonsynonymous","F44V L188S S200C",3
"lib1","SARS-CoV-2","ACTATGTACCATAGGA",9,47.89,9.02,-1.74,0.25,1.62,1.25,0.03,"1 nonsynonymous","Y50N",1
"lib1","SARS-CoV-2","ACTATGTCAAAAATAA",2,42.72,10.76,0,0.06,2.81,1.07,0,"1 nonsynonymous","K198S",1
"lib1","SARS-CoV-2","ACTATGTTAACTAGGT",2,14.2,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","I28N W106I I138C A145K T170I",5
"lib1","SARS-CoV-2","ACTATTAAATATATAA",4,9.38,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N13A G51S A81V D112N G152R",5
"lib1","SARS-CoV-2","ACTATTAACATTCAGT",2,131.08,10.69,-0.07,0.05,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATTAAGCTATGTA",2,5.55,9.26,-1.5,0.32,1.83,1.06,0.03,">1 nonsynonymous","S53I C61E E76G S200N",4
"lib1","SARS-CoV-2","ACTATTAAGGCTCAAG",1,3.15,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ACTATTACAAGATAAA",9,48.73,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S45P W106I G166M",3
"lib1","SARS-CoV-2","ACTATTACCCTTAAAA",5,73.89,10.36,-0.4,0.06,2.98,1.01,0,">1 nonsynonymous","G9T I28Y C61N N107A",4
"lib1","SARS-CoV-2","ACTATTACCTATCGCA",5,13.39,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","E141S R179G",2
"lib1","SARS-CoV-2","ACTATTACTAAGGGAA",1,7.44,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","G9R S29N N58W C102A",4
"lib1","SARS-CoV-2","ACTATTACTCGATTGG",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D C61M V181K",3
"lib1","SARS-CoV-2","ACTATTACTTGCGGAC",4,4.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","ACTATTAGAAATTAAA",1,7.4,10.71,-0.05,0.17,2.76,1.2,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACTATTAGATAGGAAA",1,5.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23L N151D",2
"lib1","SARS-CoV-2","ACTATTAGCCGACGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R T15A C49* D98E P197S",5
"lib1","SARS-CoV-2","ACTATTAGGGCAGAGA",2,10.4,6,-4.76,1.79,3,1.19,0.02,">1 nonsynonymous","D59L F99V R124V S147K N151A",5
"lib1","SARS-CoV-2","ACTATTATAAAACAAT",1,20.27,10.14,-0.62,0.12,2.74,1,0.01,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","ACTATTATAATAATAT",1,63.05,10.78,0.02,0.09,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATTCAAGCTTTAT",4,77.79,10.57,-0.2,0.04,2.88,1.08,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","ACTATTCAGAAACCAA",4,6.53,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I142S V182P",2
"lib1","SARS-CoV-2","ACTATTCAGTTAAATA",2,39.86,10.79,0.02,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATTCCCCTAAAAA",1,11.75,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S36Y Y119T E141F C150K",4
"lib1","SARS-CoV-2","ACTATTCGTGAAACAA",2,2.75,NA,NA,NA,NA,NA,NA,"stop","T3L G9P V77Q C102* N120G I138L P177S",7
"lib1","SARS-CoV-2","ACTATTCTACATACCT",1,62.95,10.8,0.03,0.08,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATTCTATCGAGGG",7,144.33,10.77,0,0.06,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTATTCTTTGTACAT",4,157.11,10.39,-0.38,0.03,2.9,1.02,0,"1 nonsynonymous","F47T",1
"lib1","SARS-CoV-2","ACTATTGGAACCCGAA",3,23.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6K F44M F62R P96L",4
"lib1","SARS-CoV-2","ACTATTGGAAGAAGAA",9,15.45,6,-4.76,2,1.5,1.21,0.08,">1 nonsynonymous","V20L A81W I104G N120S F156P",5
"lib1","SARS-CoV-2","ACTATTGGAATACCAA",2,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D N107S I142L",3
"lib1","SARS-CoV-2","ACTATTGGATTACAAT",9,112.95,9.94,-0.82,0.1,2.2,1.01,0,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","ACTATTGTAAATTATC",1,0.4,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","ACTATTTAACACAAAC",1,33.59,10.77,0.01,0.07,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTATTTACACGATTT",3,16.04,6,-4.76,2,3,1.15,0.01,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","ACTATTTCAAACTGGA",1,11.43,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","I2F R25I E141K C150N",4
"lib1","SARS-CoV-2","ACTATTTCATCCACAA",1,16.98,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R25C G51M C61Y A105L G174L F185S",6
"lib1","SARS-CoV-2","ACTATTTCCACACGTG",6,43.06,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10G L57C W106F G117K",4
"lib1","SARS-CoV-2","ACTATTTTACACCATT",8,49.78,6,-4.76,2,1.5,1.27,0.04,"1 nonsynonymous","G101E",1
"lib1","SARS-CoV-2","ACTATTTTCACTCGGT",4,0.27,NA,NA,NA,NA,NA,NA,"stop","C6* T170C",2
"lib1","SARS-CoV-2","ACTATTTTCCTATCGC",3,14.07,7.89,-2.87,0.41,1.5,1.02,0.08,">1 nonsynonymous","C49P L60K W106R D112N N120V T201S",6
"lib1","SARS-CoV-2","ACTATTTTCTAGAAAT",7,131.38,10.72,-0.05,0.06,2.88,1.06,0,">1 nonsynonymous","P7S T201L",2
"lib1","SARS-CoV-2","ACTATTTTTACCTTTC",1,28.28,8.77,-1.99,0.26,1.5,1.15,0.03,">1 nonsynonymous","N1W P82I I138L",3
"lib1","SARS-CoV-2","ACTCAAAAAAATAACA",5,118.45,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4S K26T V37L D75S N109L C158K R179Y",7
"lib1","SARS-CoV-2","ACTCAAAAAACGACAT",3,14.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T K48C G86W E141C",4
"lib1","SARS-CoV-2","ACTCAAAAATATTGCA",6,55.81,9.92,-0.84,0.11,2.69,1.08,0,">1 nonsynonymous","T15F S29A L125A",3
"lib1","SARS-CoV-2","ACTCAAAACTATAGAA",1,7.63,9.49,-1.27,0.19,2.25,1.09,0.01,">1 nonsynonymous","S53A F62L V181L T201S",4
"lib1","SARS-CoV-2","ACTCAAAAGTATCGAC",4,36.53,10.75,-0.02,0.06,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTCAAAATCTACTAA",1,39.21,8.23,-2.54,0.14,1.83,1.13,0.01,">1 nonsynonymous","V37L S43V L60H D98I G146R",5
"lib1","SARS-CoV-2","ACTCAAAATTTCTATC",6,42.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G W106Y",2
"lib1","SARS-CoV-2","ACTCAAACAAAACTAT",8,106.6,10.66,-0.1,0.05,2.93,1.04,0,"1 nonsynonymous","Y123W",1
"lib1","SARS-CoV-2","ACTCAAACAAATTCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","S43I C49I N92* D98S A105T",5
"lib1","SARS-CoV-2","ACTCAAACAGTCAAGA",14,75.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F167V S184P",2
"lib1","SARS-CoV-2","ACTCAAACGTGAAACA",1,72.34,7.73,-3.03,0.17,1.55,1.11,0.01,">1 nonsynonymous","G51A S113N",2
"lib1","SARS-CoV-2","ACTCAAACTCAGATTA",5,12.75,6.49,-4.28,0.18,3,1.1,0,">1 nonsynonymous","A42C C102Q G166T",3
"lib1","SARS-CoV-2","ACTCAAAGAGAATACC",4,52.84,10.24,-0.52,0.05,2.87,1,0,">1 nonsynonymous","D97Q G174T",2
"lib1","SARS-CoV-2","ACTCAAAGATGAAGAT",1,14.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G51I D90S F99S G155N",4
"lib1","SARS-CoV-2","ACTCAAAGATGTAGAG",2,7.96,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A42M S69L R124T",3
"lib1","SARS-CoV-2","ACTCAAAGCCAAACAC",2,34.77,10.62,-0.15,0.06,2.98,1,0,"1 nonsynonymous","N64K",1
"lib1","SARS-CoV-2","ACTCAAAGGCAGCTGG",6,126.34,9.98,-0.78,0.05,2.86,1.02,0,"1 nonsynonymous","Y165M",1
"lib1","SARS-CoV-2","ACTCAAAGTATTTCCC",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83A D90K V103S F134S G152E Y159A",6
"lib1","SARS-CoV-2","ACTCAAATACAGCCTT",4,68.15,8.53,-2.23,0.25,1.54,1.17,0.02,">1 nonsynonymous","S29H K56S Y165P",3
"lib1","SARS-CoV-2","ACTCAAATCATAGAAC",2,2.05,NA,NA,NA,NA,NA,NA,"stop","R16* S41G Y121K R124H",4
"lib1","SARS-CoV-2","ACTCAAATGGTTCCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","A89* D98Q C150N",3
"lib1","SARS-CoV-2","ACTCAACAAGCTTAAC",4,122.96,10.32,-0.44,0.03,2.91,1.02,0,"1 nonsynonymous","Q144I",1
"lib1","SARS-CoV-2","ACTCAACACAATTGAC",6,2.28,NA,NA,NA,NA,NA,NA,"stop","T15W R25* P96* R136V V153W",5
"lib1","SARS-CoV-2","ACTCAACACTTGGGTC",9,72.48,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3L E10H I104M Y143C Y159M",5
"lib1","SARS-CoV-2","ACTCAACATCCAATAT",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G P82N T201S",3
"lib1","SARS-CoV-2","ACTCAACCAACCCTTA",1,25.25,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D98L D112K Y175S T201N",4
"lib1","SARS-CoV-2","ACTCAACCAGCACGAC",3,21.95,10.69,-0.08,0.1,2.82,1.16,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","ACTCAACGACCGGGTA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","F44L G51* V182A",3
"lib1","SARS-CoV-2","ACTCAACGCCGTCATA",7,5.83,NA,NA,NA,NA,NA,NA,"stop","P7* A89N",2
"lib1","SARS-CoV-2","ACTCAACGGCCCCCTG",6,83.48,6.15,-4.61,1.08,1.5,1.26,0.05,">1 nonsynonymous","G152L Y178K",2
"lib1","SARS-CoV-2","ACTCAACTCCATGGTG",3,45.02,9.84,-0.92,0.21,1.77,1.13,0.01,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","ACTCAACTTTAAGGAA",1,28.01,10.81,0.04,0.11,2.86,1.11,0,">1 nonsynonymous","I28M L187Q P197A",3
"lib1","SARS-CoV-2","ACTCAAGAAATATGTA",7,47.62,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N4C F47L N107H Y123S R136C F156L Q163E",7
"lib1","SARS-CoV-2","ACTCAAGAAGAAGTGA",4,53.8,10.23,-0.53,0.08,2.65,1.08,0,">1 nonsynonymous","N40Q R136C",2
"lib1","SARS-CoV-2","ACTCAAGACAAAACCA",1,5.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R K56L R78L Y91L V103G",5
"lib1","SARS-CoV-2","ACTCAAGATATCACGA",2,11.7,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","N1V P96S D112R",3
"lib1","SARS-CoV-2","ACTCAAGCCCAGATCC",4,15.24,8.14,-2.63,0.19,1.69,1.17,0.02,">1 nonsynonymous","N107M T170H",2
"lib1","SARS-CoV-2","ACTCAAGGCGCAAAAG",4,0.92,NA,NA,NA,NA,NA,NA,"stop","E10* P82G",2
"lib1","SARS-CoV-2","ACTCAAGGTATTTAAT",6,81.72,6.44,-4.32,0.37,1.5,1.17,0.01,">1 nonsynonymous","I138M C158H",2
"lib1","SARS-CoV-2","ACTCAAGTCAACCATA",1,14.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6S T85L A105M K128I",4
"lib1","SARS-CoV-2","ACTCAAGTGAACGAAT",1,39.06,8.6,-2.17,0.12,2.92,1.01,0.01,">1 nonsynonymous","S43R S113M K128S V153S",4
"lib1","SARS-CoV-2","ACTCAATAACCCAGTC",1,18.35,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D98I D112S Y119H",3
"lib1","SARS-CoV-2","ACTCAATAACCTCCAA",2,9.21,6.53,-4.24,0.43,1.5,1.19,0.06,">1 nonsynonymous","A105T Q144Y G166V Y178V",4
"lib1","SARS-CoV-2","ACTCAATAGTACGTGC",1,8.05,7.37,-3.39,0.26,2.5,1.28,0.01,">1 nonsynonymous","C6M V32S P169T T170K",4
"lib1","SARS-CoV-2","ACTCAATATACGATTA",6,92.37,10.4,-0.37,0.03,2.87,1.05,0,">1 nonsynonymous","D90R A145S",2
"lib1","SARS-CoV-2","ACTCAATATGTGTTAG",5,96.21,10.52,-0.24,0.05,2.86,1.02,0,">1 nonsynonymous","L38I L60T",2
"lib1","SARS-CoV-2","ACTCAATCAATAAAAG",1,21.54,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","S45M L95Y",2
"lib1","SARS-CoV-2","ACTCAATCACACAAAC",1,20.55,10.7,-0.06,0.12,2.87,1.08,0.01,"1 nonsynonymous","V65L",1
"lib1","SARS-CoV-2","ACTCAATCACGTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9R V32* D90Y R127T Q168K",5
"lib1","SARS-CoV-2","ACTCAATCCAATCACG",7,31.7,10.66,-0.11,0.07,2.95,1.01,0,">1 nonsynonymous","G152F S184V",2
"lib1","SARS-CoV-2","ACTCAATGATAGGCCT",3,60.58,9.18,-1.58,0.14,2.41,1.13,0.01,">1 nonsynonymous","K87S A105C V173D",3
"lib1","SARS-CoV-2","ACTCAATGATCAATCA",10,62.89,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","ACTCAATGTCATGGGA",2,13.87,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V20L Y143A",2
"lib1","SARS-CoV-2","ACTCAATTGCGAGCTA",2,61.23,6,-4.76,1.22,1.5,1.1,0,">1 nonsynonymous","R25F G51S L122H",3
"lib1","SARS-CoV-2","ACTCAATTTTTTTTCC",2,0.52,NA,NA,NA,NA,NA,NA,"stop","K56* P82* Y119C",3
"lib1","SARS-CoV-2","ACTCACAAAAGCTGAC",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L I104N G116F E141T",4
"lib1","SARS-CoV-2","ACTCACAAGATTATAG",1,82.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5T T55Q P133F Q176I",4
"lib1","SARS-CoV-2","ACTCACAAGCCGCAAC",10,77.05,9.97,-0.79,0.09,2.51,1.06,0,">1 nonsynonymous","N4C R136S",2
"lib1","SARS-CoV-2","ACTCACACCAGTATTA",3,29.89,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","F8L Q79K E135P G174F K199N",5
"lib1","SARS-CoV-2","ACTCACACCTTCACTG",4,21.86,9.63,-1.13,0.18,1.84,1.1,0.02,">1 nonsynonymous","A33P V52D N58A K87Q Y178H",5
"lib1","SARS-CoV-2","ACTCACACTCCCATTA",4,57.98,8.62,-2.15,0.11,2.85,1.13,0.01,">1 nonsynonymous","Y119Q F156V",2
"lib1","SARS-CoV-2","ACTCACAGCGACGAAC",2,10.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C61L T140P V180D",3
"lib1","SARS-CoV-2","ACTCACATGGATATCA",6,118.06,10.16,-0.61,0.05,2.8,1,0,">1 nonsynonymous","C6N K56N L60H",3
"lib1","SARS-CoV-2","ACTCACCAAACCTTGC",6,1.01,NA,NA,NA,NA,NA,NA,"stop","T3C K114* F126Q",3
"lib1","SARS-CoV-2","ACTCACCCGATTTCAG",3,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K F62L",2
"lib1","SARS-CoV-2","ACTCACCCTAACCTGA",1,16.56,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V77W F99T",2
"lib1","SARS-CoV-2","ACTCACCGTGATGAGT",4,0.53,NA,NA,NA,NA,NA,NA,"stop","A33* T170M",2
"lib1","SARS-CoV-2","ACTCACGATAATATAG",7,86.06,10.78,0.01,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCACGGACTTTAAA",2,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122K V173W",2
"lib1","SARS-CoV-2","ACTCACGGATTTTAGG",3,7.62,10.82,0.06,0.1,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCACGGTTCACACG",5,143.57,10.57,-0.2,0.04,2.92,1.03,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","ACTCACGTTTAAAAAG",9,66.49,10.01,-0.76,0.09,2.67,1.04,0,">1 nonsynonymous","C6P F160R",2
"lib1","SARS-CoV-2","ACTCACTACAAACTAC",9,158.6,10.76,0,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCACTAGGGAAAGT",3,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y C61S G74K P96L E135L",5
"lib1","SARS-CoV-2","ACTCACTATGTTGTCC",1,8.93,9.74,-1.02,0.1,2.68,1.03,0.01,"1 nonsynonymous","Y121P",1
"lib1","SARS-CoV-2","ACTCACTATTTAACCT",13,105.85,10.77,0,0.06,2.89,1.03,0,">1 nonsynonymous","Y39I T46S",2
"lib1","SARS-CoV-2","ACTCACTATTTGCGCG",5,37.14,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G86Y Y119I A145R",3
"lib1","SARS-CoV-2","ACTCACTCGCAGCTGG",4,45.57,10.74,-0.03,0.08,2.88,1.08,0,"1 nonsynonymous","S184V",1
"lib1","SARS-CoV-2","ACTCACTCTGCACACT",3,16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14L L60M A105D F126L G155F",5
"lib1","SARS-CoV-2","ACTCACTGGTATGACA",3,96.39,10.77,0,0.04,2.95,1.01,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","ACTCACTTACCGCTTC",2,25.55,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","N24Y Y50I F185K",3
"lib1","SARS-CoV-2","ACTCACTTCAAGACAA",7,5.03,NA,NA,NA,NA,NA,NA,"stop","L5Q I88V F126G F167*",4
"lib1","SARS-CoV-2","ACTCACTTTGAGGCCT",2,0.48,NA,NA,NA,NA,NA,NA,"stop","N13V D75H Q84S Q144*",4
"lib1","SARS-CoV-2","ACTCAGAAATGTAAAT",1,44.32,6.19,-4.57,0.73,1.5,1.13,0.02,">1 nonsynonymous","Y35V N40F K87Q L95K S129G C158V",6
"lib1","SARS-CoV-2","ACTCAGAATAAAACCA",8,28.56,6.27,-4.49,0.97,1.5,1.33,0.06,">1 nonsynonymous","T3Q P82C G152Y",3
"lib1","SARS-CoV-2","ACTCAGAATATCAGTA",2,49.95,10.14,-0.63,0.06,2.88,1.02,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","ACTCAGAATGAACAAG",3,0.32,NA,NA,NA,NA,NA,NA,"stop","S43A D97* G117R T201K",4
"lib1","SARS-CoV-2","ACTCAGACAAGCACCT",14,246.97,10.24,-0.53,0.03,2.83,1.04,0,">1 nonsynonymous","A89V N130Q",2
"lib1","SARS-CoV-2","ACTCAGAGAAACTGCC",5,30.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64F Q84F C102L",3
"lib1","SARS-CoV-2","ACTCAGAGAACAGACA",2,27.02,10.97,0.2,0.11,2.95,1,0,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","ACTCAGATAAGTATAT",3,24.95,6,-4.76,1.37,1.5,1.24,0.03,">1 nonsynonymous","Y143K P149N C195R",3
"lib1","SARS-CoV-2","ACTCAGCACGACGCAA",3,56.53,10.71,-0.06,0.06,2.96,1.03,0,">1 nonsynonymous","Y39R I138C",2
"lib1","SARS-CoV-2","ACTCAGCGAAGAACCC",13,121.05,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33G G51F L60A N107W N120L C195I",6
"lib1","SARS-CoV-2","ACTCAGCGCCAGGTAA",1,51.25,10.21,-0.55,0.06,2.85,1,0,">1 nonsynonymous","D98M C195Y",2
"lib1","SARS-CoV-2","ACTCAGCGTGAACCGG",1,33.43,9.01,-1.76,0.06,2.86,1.12,0,">1 nonsynonymous","T55G G166R T201S",3
"lib1","SARS-CoV-2","ACTCAGCTGTATCGAC",1,51.1,10.6,-0.17,0.05,2.96,1,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","ACTCAGGAACTGAATG",8,75.92,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G74V D98F Y123N",3
"lib1","SARS-CoV-2","ACTCAGGGACTTCTGC",4,79.92,10.4,-0.36,0.04,2.86,1.02,0,">1 nonsynonymous","E10P S41A",2
"lib1","SARS-CoV-2","ACTCAGTTAAGAAATC",2,214.06,9.46,-1.3,0.08,2.75,1.13,0,">1 nonsynonymous","S129T Q176A",2
"lib1","SARS-CoV-2","ACTCATAAAATCGGGG",2,68.91,10.69,-0.07,0.09,2.83,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCATAAACAGATGC",7,254.2,10.08,-0.68,0.06,2.75,1,0,">1 nonsynonymous","F12L S129P",2
"lib1","SARS-CoV-2","ACTCATAACCGCAGTA",3,67.31,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","A105V D137L T170P",3
"lib1","SARS-CoV-2","ACTCATAACTGAGTGG",3,24.68,7.49,-3.27,0.41,1.5,1.01,0.07,">1 nonsynonymous","F99V Y143S",2
"lib1","SARS-CoV-2","ACTCATAATCAAGCTA",1,15.8,8.83,-1.94,0.09,2.79,1.1,0,">1 nonsynonymous","K87G L125C",2
"lib1","SARS-CoV-2","ACTCATACACAAAGTG",1,15.54,6.35,-4.42,1.6,1.5,1.11,0.02,">1 nonsynonymous","L122G K132G T148A Y165V P169S",5
"lib1","SARS-CoV-2","ACTCATACAGAATTGA",1,5.1,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","E10R V103E",2
"lib1","SARS-CoV-2","ACTCATACAGGAATTA",4,26.55,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A22E C31F A105L",3
"lib1","SARS-CoV-2","ACTCATACTGTCATCA",1,0.04,NA,NA,NA,NA,NA,NA,"stop","S69W W106* S108P",3
"lib1","SARS-CoV-2","ACTCATAGATTAGCAA",1,11.47,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","L5C A67F S113I L122V V173R H189M",6
"lib1","SARS-CoV-2","ACTCATATAGCTTGAA",3,45.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36P C61W D68V V103E",4
"lib1","SARS-CoV-2","ACTCATATATTAAATT",3,20.95,6.44,-4.33,0.43,1.5,1.04,0.02,">1 nonsynonymous","A14D Y93I F99Y",3
"lib1","SARS-CoV-2","ACTCATATTGAAACAC",1,197.86,8.47,-2.3,0.16,1.5,1.07,0.01,">1 nonsynonymous","N4L F12C R27Q Y66T A192R",5
"lib1","SARS-CoV-2","ACTCATCAACCCTCCA",1,8.48,10.38,-0.38,0.06,2.92,1.07,0,">1 nonsynonymous","V37D P54C",2
"lib1","SARS-CoV-2","ACTCATCAATTAGAAC",6,66.54,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F12K S69M K94E T100L T148V",5
"lib1","SARS-CoV-2","ACTCATCATCGACGGC",2,0.35,NA,NA,NA,NA,NA,NA,"stop","I28F S36* F44V G51V S200T",5
"lib1","SARS-CoV-2","ACTCATCCACATCGAA",8,19.95,6,-4.76,0.82,1.5,1.13,0.01,">1 nonsynonymous","Y21M R127L",2
"lib1","SARS-CoV-2","ACTCATCCAGGCCTAC",6,124.31,9.9,-0.87,0.08,2.26,1.06,0,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","ACTCATCGAACTAAGA",2,4.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","ACTCATCGAATTTGAG",3,32.86,10.72,-0.04,0.05,2.95,1.02,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","ACTCATCTCTAGTACA",16,160.22,9.6,-1.17,0.07,1.91,1.06,0,">1 nonsynonymous","F44S A89V",2
"lib1","SARS-CoV-2","ACTCATGACAGAGGCT",8,182.29,9.17,-1.6,0.06,2.8,1.13,0,">1 nonsynonymous","C61Y Y119A T148A",3
"lib1","SARS-CoV-2","ACTCATGCGTACTTGA",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V Y91S G117Y K128L G155S",5
"lib1","SARS-CoV-2","ACTCATGGATTGCACA",5,1.6,NA,NA,NA,NA,NA,NA,"stop","V77M W106* Y121C",3
"lib1","SARS-CoV-2","ACTCATGGCACGATTG",5,24.18,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","A81P G86E",2
"lib1","SARS-CoV-2","ACTCATGGTAGAACAG",1,11.45,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V71G G101I P149D",3
"lib1","SARS-CoV-2","ACTCATGTAAACAAGG",3,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y C102L V180S",3
"lib1","SARS-CoV-2","ACTCATGTTATAGGCT",2,36.62,10.42,-0.35,0.1,2.52,1.02,0,">1 nonsynonymous","L60Q Y123I",2
"lib1","SARS-CoV-2","ACTCATTAAACATAGA",1,25.95,10.09,-0.68,0.1,2.67,1.01,0,">1 nonsynonymous","A33K T148Y",2
"lib1","SARS-CoV-2","ACTCATTCAAACAAGG",4,1.09,NA,NA,NA,NA,NA,NA,"stop","S29C L122* T170K",3
"lib1","SARS-CoV-2","ACTCATTCAGAAGTAA",1,6.59,6,-4.76,2,3,1.4,0.02,">1 nonsynonymous","F47P S69Y A89E F99V D112H G146I",6
"lib1","SARS-CoV-2","ACTCATTCCTCTTAAC",2,73.72,8.99,-1.77,0.15,1.5,1.15,0.01,">1 nonsynonymous","V32G L38S P149L",3
"lib1","SARS-CoV-2","ACTCATTGCCTAATGG",8,38.7,10.02,-0.75,0.2,1.78,1.07,0.01,">1 nonsynonymous","T3Y P133N E141K",3
"lib1","SARS-CoV-2","ACTCATTGTCCTAAAC",1,16.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F62L K114E R127P P149S",4
"lib1","SARS-CoV-2","ACTCATTTAAACGCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D S53L D68E P96S G166V",5
"lib1","SARS-CoV-2","ACTCATTTATAAAAAA",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F D112Y",2
"lib1","SARS-CoV-2","ACTCATTTCGAGAGTT",3,53.49,10.71,-0.06,0.03,2.96,1,0,"1 nonsynonymous","R78V",1
"lib1","SARS-CoV-2","ACTCCAAAATCTGAAA",1,15.59,10.72,-0.05,0.25,2.39,1.1,0.02,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","ACTCCAAACGAAAAAA",4,22.58,8.66,-2.11,0.31,1.5,1.03,0.04,">1 nonsynonymous","D59E V181S",2
"lib1","SARS-CoV-2","ACTCCAACCTTCTGTT",1,16.11,7.07,-3.7,0.57,1.5,1.07,0.06,">1 nonsynonymous","G9P S19V Y91S T100C D112Y",5
"lib1","SARS-CoV-2","ACTCCAAGCCGCCTAT",5,131.09,9.5,-1.27,0.13,1.95,1.16,0.01,">1 nonsynonymous","N30K K114N R136L",3
"lib1","SARS-CoV-2","ACTCCAAGCTACTTTA",3,24.89,9.93,-0.83,0.05,2.75,1.07,0,">1 nonsynonymous","Y66S F99W",2
"lib1","SARS-CoV-2","ACTCCAAGGCGGTCTG",2,141.4,10.21,-0.56,0.02,2.87,1.07,0,">1 nonsynonymous","A14Q N130P F160A G174W",4
"lib1","SARS-CoV-2","ACTCCAATCTGATAAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T V37G T55G K94W",4
"lib1","SARS-CoV-2","ACTCCACACTCCCTGC",6,40.9,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17V C150E",2
"lib1","SARS-CoV-2","ACTCCACACTTCACAG",1,0.52,NA,NA,NA,NA,NA,NA,"stop","C61E Y91C W106* D112L S139I",5
"lib1","SARS-CoV-2","ACTCCACAGACCACAA",9,111.08,10.62,-0.15,0.04,2.96,1.01,0,"1 nonsynonymous","K56C",1
"lib1","SARS-CoV-2","ACTCCACATCCTGTCA",2,22.23,10.36,-0.4,0.13,2.87,1,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","ACTCCACCAACTAAAA",1,38.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K56Q C61F D90W D98Y R127C",5
"lib1","SARS-CoV-2","ACTCCACGTTCCTCCG",4,83.19,9.57,-1.2,0.04,2.84,1.06,0,">1 nonsynonymous","Y35L Y119T",2
"lib1","SARS-CoV-2","ACTCCACTCGAATGAG",2,5.24,9.89,-0.87,0.27,2.6,1.08,0.01,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","ACTCCACTGCCGGTGG",3,47.1,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","T63N G86W E135V V181Y",4
"lib1","SARS-CoV-2","ACTCCACTTGTAAGAC",2,22.96,10.33,-0.44,0.09,2.83,1.05,0.01,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","ACTCCAGACGACTTCG",5,121.89,10.71,-0.05,0.08,2.9,1.05,0,"1 nonsynonymous","L122F",1
"lib1","SARS-CoV-2","ACTCCAGATAAATTTT",1,28.95,10.69,-0.08,0.05,2.96,1,0,">1 nonsynonymous","G9E V32L D98S",3
"lib1","SARS-CoV-2","ACTCCAGCAATCCCTG",3,45.45,10.68,-0.08,0.08,2.82,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTCCAGCGCGTACAA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130G S139R Y165S",3
"lib1","SARS-CoV-2","ACTCCAGCTTTGGTCA",3,19.19,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T63I N64I A81Y T85L F160A",5
"lib1","SARS-CoV-2","ACTCCAGTATGTACAA",7,144.84,10.48,-0.28,0.05,2.82,1.01,0,">1 nonsynonymous","A33S K114C",2
"lib1","SARS-CoV-2","ACTCCAGTCGCCCCAG",3,118.39,8.31,-2.45,0.13,1.76,1.16,0.01,">1 nonsynonymous","K26S Q84H N120T",3
"lib1","SARS-CoV-2","ACTCCAGTCTAGTTCA",2,57.78,10.66,-0.11,0.04,2.94,1,0,">1 nonsynonymous","V32R N120D",2
"lib1","SARS-CoV-2","ACTCCATAACAGAGAA",5,57.05,10.71,-0.05,0.05,2.97,1.03,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ACTCCATCCCCCATGT",1,43.4,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N24T T46C Y159D",3
"lib1","SARS-CoV-2","ACTCCATCGACAACAT",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S D97I",2
"lib1","SARS-CoV-2","ACTCCATCTTAATCGA",2,30.76,8.83,-1.94,0.33,1.5,1,0.05,">1 nonsynonymous","E10A P82R",2
"lib1","SARS-CoV-2","ACTCCATGACAACTGG",3,29.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V52S S113W Y121F T201N",4
"lib1","SARS-CoV-2","ACTCCATGCTACATTT",5,33.12,8.4,-2.36,0.26,1.5,1,0.03,">1 nonsynonymous","P161S V182T",2
"lib1","SARS-CoV-2","ACTCCATTCAATTGCA",7,72.71,6.01,-4.75,0.73,1.5,1.14,0.01,">1 nonsynonymous","K56L V77W L111K L125F N151W",5
"lib1","SARS-CoV-2","ACTCCATTCTAGTAGA",5,3.92,NA,NA,NA,NA,NA,NA,"stop","G117* V173I",2
"lib1","SARS-CoV-2","ACTCCCAAACAGTATG",3,66,10.36,-0.4,0.06,2.86,1,0,"1 nonsynonymous","Y91C",1
"lib1","SARS-CoV-2","ACTCCCAAACGGATAT",8,1.09,NA,NA,NA,NA,NA,NA,"stop","F8S Y35* D90R S129L R179G",5
"lib1","SARS-CoV-2","ACTCCCACAAATAACC",3,39.17,10.47,-0.29,0.05,2.89,1.04,0,">1 nonsynonymous","S129I C195F",2
"lib1","SARS-CoV-2","ACTCCCCAATACCTAA",3,16.85,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","F17L V52R I88K",3
"lib1","SARS-CoV-2","ACTCCCCAGAATTGCA",2,9.9,10.81,0.05,0.07,3,1,0,">1 nonsynonymous","G9T L122S",2
"lib1","SARS-CoV-2","ACTCCCCATATTTTCC",2,6.73,10.75,-0.01,0.06,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCCCCCCCTCTCTG",3,31.18,10.53,-0.23,0.06,2.91,1,0,">1 nonsynonymous","A42Y N130S",2
"lib1","SARS-CoV-2","ACTCCCCTAAAAGAAG",9,90.21,10.29,-0.47,0.06,2.91,1.01,0,">1 nonsynonymous","C6D V153M",2
"lib1","SARS-CoV-2","ACTCCCCTCCTAGAAT",4,0.16,NA,NA,NA,NA,NA,NA,"stop","Y119H I142S L162* V173I",4
"lib1","SARS-CoV-2","ACTCCCCTTACCTCGC",3,8.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62N G116S",2
"lib1","SARS-CoV-2","ACTCCCGAGAACAAAG",4,36.75,7.96,-2.8,0.16,1.9,1.17,0.01,">1 nonsynonymous","L5K N107H L125R",3
"lib1","SARS-CoV-2","ACTCCCGATATCACTA",5,0.13,NA,NA,NA,NA,NA,NA,"stop","R27K N58I D75* Y159*",4
"lib1","SARS-CoV-2","ACTCCCGATTATAAAC",1,23.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1V F17S N24T K94T N151Q",5
"lib1","SARS-CoV-2","ACTCCCGGACCAAAAC",1,16.75,7.18,-3.58,0.15,1.5,1.06,0,">1 nonsynonymous","L5H T15G T55C A145D",4
"lib1","SARS-CoV-2","ACTCCCTAAGACATAA",3,19.38,10.77,0.01,0.04,3,1,0,"1 nonsynonymous","T46Y",1
"lib1","SARS-CoV-2","ACTCCCTAGTGCGGGT",3,49.54,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3L L60T G86F P197K",4
"lib1","SARS-CoV-2","ACTCCCTCCACAGTAG",1,19.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y50S A67P",2
"lib1","SARS-CoV-2","ACTCCCTCGCCGATTG",6,38.9,6,-4.76,2,3,1.1,0,">1 nonsynonymous","T3S S69R I104W S139H P169S",5
"lib1","SARS-CoV-2","ACTCCCTCTACGCCGG",3,106.21,10.78,0.02,0.07,2.94,1.04,0,">1 nonsynonymous","V37F E141L",2
"lib1","SARS-CoV-2","ACTCCGAACGCGAAGC",3,0.47,NA,NA,NA,NA,NA,NA,"stop","T3* Y35C G51A Y175E",4
"lib1","SARS-CoV-2","ACTCCGAGACCAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","P54* D98S",2
"lib1","SARS-CoV-2","ACTCCGAGCCGATGAG",3,12.43,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A14C D90P K114S L125N",4
"lib1","SARS-CoV-2","ACTCCGAGTCCGTTCG",2,67.87,10.27,-0.5,0.07,2.82,1.03,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","ACTCCGATAGGCACAC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","A14C V32G G86C V182*",4
"lib1","SARS-CoV-2","ACTCCGCACAATGCTA",2,85.98,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N13L N30S K48M D112L A145V C150W",6
"lib1","SARS-CoV-2","ACTCCGCACGAAACCC",6,27.82,8.37,-2.39,0.36,1.5,1.13,0.06,">1 nonsynonymous","L5I W106E E141T",3
"lib1","SARS-CoV-2","ACTCCGCACTAGTAAC",2,15.8,8.66,-2.1,0.18,2.41,1.26,0.03,">1 nonsynonymous","L5T Y119V E141V P149S",4
"lib1","SARS-CoV-2","ACTCCGCGGGAAGCAA",5,19.08,10.46,-0.3,0.07,2.97,1.02,0,">1 nonsynonymous","N120A K128L",2
"lib1","SARS-CoV-2","ACTCCGCTCGTACGCG",7,108.79,9.68,-1.08,0.05,2.81,1.06,0,">1 nonsynonymous","E10V Y119R T201E",3
"lib1","SARS-CoV-2","ACTCCGGGAGAGGACC",1,1.16,NA,NA,NA,NA,NA,NA,"stop","A14* K114T Q144T P161I T201V",5
"lib1","SARS-CoV-2","ACTCCGGTACTACCTG",3,19.05,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15L I80T I142L",3
"lib1","SARS-CoV-2","ACTCCGGTGTAACGCA",1,10.75,8.74,-2.03,0.19,2,1.1,0.02,">1 nonsynonymous","A89M S113A V173H",3
"lib1","SARS-CoV-2","ACTCCGGTTGGAAACA",3,57.41,10.89,0.12,0.08,2.96,1.01,0,"1 nonsynonymous","S164A",1
"lib1","SARS-CoV-2","ACTCCGTGACCATGAA",4,2.69,NA,NA,NA,NA,NA,NA,"stop","N1D C61* A89I G174L T201*",5
"lib1","SARS-CoV-2","ACTCCTAAAGTGTGAA",6,1.84,NA,NA,NA,NA,NA,NA,"stop","S43T S69* P96L",3
"lib1","SARS-CoV-2","ACTCCTAAGGAAACAA",7,32.24,6,-4.76,2,3,1.18,0,">1 nonsynonymous","P82T C158T",2
"lib1","SARS-CoV-2","ACTCCTAAGGCATTGA",3,53.32,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R25T A105R",2
"lib1","SARS-CoV-2","ACTCCTACACCAGGGC",6,154.6,9.22,-1.55,0.07,2.52,1.08,0,">1 nonsynonymous","K26E D97Y Y119R",3
"lib1","SARS-CoV-2","ACTCCTACTCCAACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10N A22S Q176* T201M",4
"lib1","SARS-CoV-2","ACTCCTAGAACACTTT",1,6.62,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D68N V103A Y121W",3
"lib1","SARS-CoV-2","ACTCCTATCCCGGACT",5,41.3,8.51,-2.26,0.41,1.5,1.03,0.08,">1 nonsynonymous","Y21M C31Y Y66S S147L",4
"lib1","SARS-CoV-2","ACTCCTATGAAAGAGG",1,109.45,10.84,0.07,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCCTCGGCACCCTT",11,201.72,10.62,-0.14,0.02,2.93,1.05,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","ACTCCTGAAAAGCTAA",2,8.62,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C49K F99M V173E",3
"lib1","SARS-CoV-2","ACTCCTGAAAGCATCT",4,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y F62T G86S D98M",4
"lib1","SARS-CoV-2","ACTCCTGCGCCAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R I72N T170S",3
"lib1","SARS-CoV-2","ACTCCTTAAATGTCCA",7,180,8.31,-2.46,0.16,1.54,1.11,0.01,">1 nonsynonymous","L60K G83V N120S F156L T201P",5
"lib1","SARS-CoV-2","ACTCCTTACATCCCCG",1,29.06,10.53,-0.23,0.08,2.89,1.09,0,">1 nonsynonymous","G9W V173I",2
"lib1","SARS-CoV-2","ACTCCTTATACTCCGT",3,111.42,10.52,-0.25,0.05,2.91,1.03,0,">1 nonsynonymous","S53I F126L",2
"lib1","SARS-CoV-2","ACTCCTTATATAGCAA",3,3.96,NA,NA,NA,NA,NA,NA,"stop","K87E Y175* V180C",3
"lib1","SARS-CoV-2","ACTCCTTGAACATCTG",3,79.17,10.5,-0.27,0.04,2.87,1.07,0,"1 nonsynonymous","G116I",1
"lib1","SARS-CoV-2","ACTCCTTGATCAAAAA",3,9.4,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N1A C6E I142S G155Y",4
"lib1","SARS-CoV-2","ACTCCTTGTGGGCACT",1,121.11,10.7,-0.07,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCCTTTAAAATTAA",2,11.55,6.3,-4.47,0.86,1.5,1.07,0.03,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","ACTCCTTTACGGTACA",4,1164.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F99V A105D S147T",3
"lib1","SARS-CoV-2","ACTCCTTTCGGCCACC",5,60,10.85,0.08,0.07,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTCGAAAACAAAAAT",2,40.82,10.74,-0.02,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCGAAATAGATAAT",9,62.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N92V N110R Q144M",3
"lib1","SARS-CoV-2","ACTCGAACCTTACCGG",1,7.2,10.02,-0.75,0.27,2.92,1.01,0.03,">1 nonsynonymous","E10I H189Y",2
"lib1","SARS-CoV-2","ACTCGAACGAAGCCGC",2,81.64,6.15,-4.61,0.6,1.5,1.19,0.01,">1 nonsynonymous","P7Q R124L I138L Y143I",4
"lib1","SARS-CoV-2","ACTCGAACTAAACCAC",4,20.1,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","G9R P161Y",2
"lib1","SARS-CoV-2","ACTCGAAGAAAACCCT",1,43.31,10.77,0.01,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCGAAGGCCCGTTA",3,33.13,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y39I D90A D98Y P149K F185A",5
"lib1","SARS-CoV-2","ACTCGAAGTTGTTAGG",2,54.36,9.97,-0.79,0.12,2.15,1.02,0.01,">1 nonsynonymous","K128L I138H P149R",3
"lib1","SARS-CoV-2","ACTCGAATGGAAAATT",2,13.7,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S69G G86S G152F",3
"lib1","SARS-CoV-2","ACTCGAATTACTTTAA",1,32.76,10.35,-0.41,0.07,2.91,1,0,">1 nonsynonymous","L60Y A81K K87F",3
"lib1","SARS-CoV-2","ACTCGAATTAGCCCGA",2,28.82,10.74,-0.02,0.07,3,1.01,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","ACTCGACACAACCCTA",4,77.43,9.06,-1.71,0.27,1.5,1.04,0.04,">1 nonsynonymous","N4F C49F L95I",3
"lib1","SARS-CoV-2","ACTCGACACTAACATC",9,38.57,10.11,-0.66,0.09,2.12,1.02,0.01,"1 nonsynonymous","P149W",1
"lib1","SARS-CoV-2","ACTCGACATAGATAAG",6,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112T K198P",2
"lib1","SARS-CoV-2","ACTCGACCAAAAAAAA",1,0.04,NA,NA,NA,NA,NA,NA,"stop","V32* Y35L Y50L K56S D90A C150T",6
"lib1","SARS-CoV-2","ACTCGACCATCACATT",1,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R K114E",2
"lib1","SARS-CoV-2","ACTCGACGAATGAAAA",3,115.34,6,-4.76,0.82,1.5,1.14,0.01,">1 nonsynonymous","C31V A89T Y178E",3
"lib1","SARS-CoV-2","ACTCGAGAATTGAGAT",3,37.13,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T85G L131D",2
"lib1","SARS-CoV-2","ACTCGAGAGAGATTTA",1,26.91,10.35,-0.41,0.05,2.94,1.03,0,"1 nonsynonymous","N107C",1
"lib1","SARS-CoV-2","ACTCGAGAGGTCTTGC",1,0.76,NA,NA,NA,NA,NA,NA,"stop","C6* N13V I28Y V37Y S45D",5
"lib1","SARS-CoV-2","ACTCGAGAGTTTCCTA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43D D90N D97I K198E",4
"lib1","SARS-CoV-2","ACTCGAGATATCCATC",3,13.59,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G9R S19Q R27I Y50C D90L N109M Y119P",7
"lib1","SARS-CoV-2","ACTCGAGCCGAAAAAA",5,63.66,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","A22L S45F F99T G152S",4
"lib1","SARS-CoV-2","ACTCGAGCTCATAATA",4,25.07,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V11P L95R F99N W106E",4
"lib1","SARS-CoV-2","ACTCGAGGTTCAAGTA",2,10.98,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","D112W S129N",2
"lib1","SARS-CoV-2","ACTCGATAAAGTGAAC",3,44.96,10.29,-0.48,0.09,2.84,1.09,0,">1 nonsynonymous","A33Q D59K",2
"lib1","SARS-CoV-2","ACTCGATCCCCTATAG",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N T201E",2
"lib1","SARS-CoV-2","ACTCGATCTTCAATCT",2,38.55,9.27,-1.49,0.14,2.42,1.1,0.01,">1 nonsynonymous","S43L N107V",2
"lib1","SARS-CoV-2","ACTCGATGAACTAGAG",3,24.11,10.87,0.11,0.07,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTCGATGCGGCATGT",2,57.94,10.3,-0.46,0.05,2.89,1.05,0,">1 nonsynonymous","I2V F12V",2
"lib1","SARS-CoV-2","ACTCGATGGATCCTAT",4,30.91,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I88M N92R",2
"lib1","SARS-CoV-2","ACTCGCAAAAATTAAG",1,17.93,8.91,-1.85,0.36,1.5,1.12,0.06,">1 nonsynonymous","F8S L162V T201A",3
"lib1","SARS-CoV-2","ACTCGCAAAGCTCCAA",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R F62V A81K Y178F",4
"lib1","SARS-CoV-2","ACTCGCAACAGAGATG",5,18.44,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F12H S19D Y50F C61L Y93L Y119D",6
"lib1","SARS-CoV-2","ACTCGCAAGAAGTCAA",7,92.71,8.99,-1.77,0.38,1.5,1,0.05,">1 nonsynonymous","L5I A105L F134R",3
"lib1","SARS-CoV-2","ACTCGCACGCGAGATA",2,11.46,8.09,-2.67,0.47,1.5,1.17,0.06,">1 nonsynonymous","W23A F47M",2
"lib1","SARS-CoV-2","ACTCGCATATACACTA",2,17.24,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","R124P",1
"lib1","SARS-CoV-2","ACTCGCCAACAAAAAA",1,0.66,NA,NA,NA,NA,NA,NA,"stop","I2* R78I G117S G155M Y178D",5
"lib1","SARS-CoV-2","ACTCGCCGGTATGAAA",3,7.15,9.31,-1.46,0.19,2.52,1.39,0.01,">1 nonsynonymous","R16I Y119L",2
"lib1","SARS-CoV-2","ACTCGCGAAAATAACC",1,34.44,8.2,-2.56,0.4,1.5,1,0.05,">1 nonsynonymous","G51L S129P P149M",3
"lib1","SARS-CoV-2","ACTCGCGTATGCAGTT",4,0.39,NA,NA,NA,NA,NA,NA,"stop","A81* E154W",2
"lib1","SARS-CoV-2","ACTCGCTCAATAATCA",4,77.1,10.7,-0.06,0.06,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCGCTCTAACGTAG",1,9.46,10.11,-0.66,0.25,1.74,1.03,0.03,">1 nonsynonymous","T3D E10G D59W R136Q",4
"lib1","SARS-CoV-2","ACTCGGAAAACAACGC",1,20.6,9.18,-1.59,0.26,1.71,1.16,0.04,">1 nonsynonymous","Y35L A42I Y93L T201Q",4
"lib1","SARS-CoV-2","ACTCGGAAAACACTTA",2,30.05,10.66,-0.1,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCGGAACACAATTA",3,36.11,9.76,-1.01,0.1,2.51,1.04,0,">1 nonsynonymous","Q84V A105V",2
"lib1","SARS-CoV-2","ACTCGGACCGTAATAC",4,80.44,10.77,0.01,0.06,2.88,1.08,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","ACTCGGAGAACATAAA",6,32.35,10.66,-0.11,0.09,2.97,1,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","ACTCGGAGAAGCCTTG",1,59.76,10.11,-0.65,0.08,2.84,1.01,0,">1 nonsynonymous","F44P L60T",2
"lib1","SARS-CoV-2","ACTCGGATCTAGCGCT",4,145.21,9.76,-1.01,0.11,2.02,1.08,0.01,">1 nonsynonymous","A18R N40C",2
"lib1","SARS-CoV-2","ACTCGGATTACGTAGG",6,92.18,8.69,-2.07,0.06,2.65,1.11,0,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","ACTCGGCGACTACTAC",10,157.72,10.7,-0.06,0.09,2.78,1.06,0,"1 nonsynonymous","T148F",1
"lib1","SARS-CoV-2","ACTCGGGAGAATTTGT",20,9.21,NA,NA,NA,NA,NA,NA,"stop","A22* F62A G146L",3
"lib1","SARS-CoV-2","ACTCGGGCTATAACGA",5,76.15,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P96S R127Y C195L",3
"lib1","SARS-CoV-2","ACTCGGGTGCCATTGA",5,15.84,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F62H V71S W106C K199V",4
"lib1","SARS-CoV-2","ACTCGGTAAAATTAAC",6,119.08,10.4,-0.36,0.04,2.95,1.01,0,">1 nonsynonymous","Y35L F156H",2
"lib1","SARS-CoV-2","ACTCGGTGAACTTCAA",4,57.27,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36M S43L G101Q",3
"lib1","SARS-CoV-2","ACTCGGTTCCCTCTTT",4,21.5,10,-0.76,0.12,1.96,1.1,0.01,">1 nonsynonymous","N4H A33D P149C",3
"lib1","SARS-CoV-2","ACTCGTAGGGTCGTTA",12,57.59,10.61,-0.15,0.08,2.77,1.05,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","ACTCGTATTACAAAGG",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L L183W",2
"lib1","SARS-CoV-2","ACTCGTCAAAACATAA",5,101.54,10.67,-0.1,0.03,2.94,1.02,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","ACTCGTCAAATTACTG",1,1.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","ACTCGTCACGGTAAAA",4,11.64,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","K128Y C150G",2
"lib1","SARS-CoV-2","ACTCGTCTTTGTAAAA",3,6.47,NA,NA,NA,NA,NA,NA,"stop","K48* Q163K",2
"lib1","SARS-CoV-2","ACTCGTGCCAGAGTTC",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R I88N I104M",3
"lib1","SARS-CoV-2","ACTCGTTCGTGGAACT",2,55.23,10.72,-0.04,0.09,2.88,1.08,0,"1 nonsynonymous","P197I",1
"lib1","SARS-CoV-2","ACTCTAAAGGCCCATT",8,36.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11H A18Q G83H N109T R124N N171I T201V",7
"lib1","SARS-CoV-2","ACTCTAACAAGATTAA",12,149.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2S R16C P96M R179S",4
"lib1","SARS-CoV-2","ACTCTAACAGGTACCC",2,13.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9C Y50N F62H D98I",4
"lib1","SARS-CoV-2","ACTCTAACCATAGACC",6,63.37,8.32,-2.44,0.19,1.5,1.2,0.01,"1 nonsynonymous","Y21K",1
"lib1","SARS-CoV-2","ACTCTAAGAGCTGGGC",3,11.44,9.71,-1.06,0.16,2.36,1.06,0.01,"1 nonsynonymous","P149W",1
"lib1","SARS-CoV-2","ACTCTAAGGAAAACCA",1,6.82,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A42W S53A T63G G86W",4
"lib1","SARS-CoV-2","ACTCTAATAGCCAGGC",2,71.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S69E G86C P96S W106N",4
"lib1","SARS-CoV-2","ACTCTAATGATAAGCT",5,28.92,6.61,-4.16,0.5,1.5,1.17,0.04,">1 nonsynonymous","Y21K S41N C49L N64G K87M F99L",6
"lib1","SARS-CoV-2","ACTCTAATTTCTTGAA",7,90.65,10.18,-0.58,0.07,2.79,1,0,">1 nonsynonymous","P7Y L60T G83R",3
"lib1","SARS-CoV-2","ACTCTACACACCTTTT",1,18.97,10.86,0.09,0.09,2.89,1.08,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","ACTCTACCATATCTGG",3,35.59,7.9,-2.86,0.28,1.5,1.12,0.03,">1 nonsynonymous","L5R N24T G83R D112Y K198M",5
"lib1","SARS-CoV-2","ACTCTACGATACTCGT",2,7.52,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L60E K94G D98L",3
"lib1","SARS-CoV-2","ACTCTACGATTAATTG",4,61.82,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A81I I142D",2
"lib1","SARS-CoV-2","ACTCTACGTTCAACAT",2,22.57,10.43,-0.33,0.14,2.78,1.07,0.01,">1 nonsynonymous","P54I V173I",2
"lib1","SARS-CoV-2","ACTCTACTTCAAGCGA",4,32.77,9.07,-1.7,0.12,2.92,1.11,0.01,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","ACTCTACTTTTAATGT",2,43.7,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","W23C V37Y W106Y",3
"lib1","SARS-CoV-2","ACTCTAGACAAAACTT",1,22.63,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","F47S L95V F167V",3
"lib1","SARS-CoV-2","ACTCTAGACTATGTAA",6,22.44,6.3,-4.46,0.7,1.5,1.21,0.03,">1 nonsynonymous","D59G I88F",2
"lib1","SARS-CoV-2","ACTCTAGCGGTCGGTG",4,117.88,10.74,-0.02,0.06,2.87,1.07,0,">1 nonsynonymous","T55S C61K",2
"lib1","SARS-CoV-2","ACTCTAGGACAACACT",1,24.04,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V20K S45A",2
"lib1","SARS-CoV-2","ACTCTAGGATGAAAAC",1,12.88,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V77M L95R C158N",3
"lib1","SARS-CoV-2","ACTCTATAAATCTATA",8,102.9,10.5,-0.26,0.05,2.88,1.04,0,">1 nonsynonymous","N1T A81S",2
"lib1","SARS-CoV-2","ACTCTATACCTACGTG",2,10.59,9.23,-1.54,0.47,1.94,1.17,0.08,">1 nonsynonymous","N13P L60R A81S G117K G146S N151V F156Q",7
"lib1","SARS-CoV-2","ACTCTATGACTAATTA",1,5.65,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F62S N107G Q163N Q176T",4
"lib1","SARS-CoV-2","ACTCTATGATGTTATA",2,54.94,10.74,-0.02,0.13,2.89,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTCTATGCATACGCG",7,1.19,NA,NA,NA,NA,NA,NA,"stop","T3R R25G P96* E135L",4
"lib1","SARS-CoV-2","ACTCTATGCTAATCAT",3,99.59,10.58,-0.18,0.05,2.91,1,0,">1 nonsynonymous","Y39G C61K V173F",3
"lib1","SARS-CoV-2","ACTCTATTAATCCATG",5,18.18,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","C6L V77K T85K T100H",4
"lib1","SARS-CoV-2","ACTCTATTGTATACAC",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F D75K A89W Y143I Q163H",5
"lib1","SARS-CoV-2","ACTCTATTTTGACGTT",2,27.74,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L38P V52N F99I I142R",4
"lib1","SARS-CoV-2","ACTCTCACAACCCGCC",3,66.06,9.83,-0.94,0.05,2.84,1.04,0,">1 nonsynonymous","F126V N151A L187P",3
"lib1","SARS-CoV-2","ACTCTCACAAGGAAAT",9,212.2,7.32,-3.45,0.11,1.61,1.09,0,">1 nonsynonymous","C158L P197H",2
"lib1","SARS-CoV-2","ACTCTCAGAATATGGC",1,9.37,11.09,0.32,0.55,1.86,1,0.07,">1 nonsynonymous","Y50M D90L",2
"lib1","SARS-CoV-2","ACTCTCAGAATCAGTT",9,1.83,NA,NA,NA,NA,NA,NA,"stop","G9C L60K I104Y P149*",4
"lib1","SARS-CoV-2","ACTCTCAGAGAAACCC",4,123.7,10.48,-0.28,0.05,2.88,1.07,0,">1 nonsynonymous","K87T E141S G152N V173F",4
"lib1","SARS-CoV-2","ACTCTCAGAGTTAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M A33V V37Y F99S",4
"lib1","SARS-CoV-2","ACTCTCATTAAGTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W N157L",2
"lib1","SARS-CoV-2","ACTCTCCAGCCCCGAA",3,41.51,9.93,-0.84,0.09,2.82,1.05,0.01,">1 nonsynonymous","T63E K87S N151F V173F",4
"lib1","SARS-CoV-2","ACTCTCCCCGACAGGG",2,25.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106D",1
"lib1","SARS-CoV-2","ACTCTCCGAAGAATTA",1,33.55,8.51,-2.25,0.15,2.76,1.11,0.01,">1 nonsynonymous","T85V Y123K N157R",3
"lib1","SARS-CoV-2","ACTCTCCTCGCAGCTA",8,1614.96,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G83I L131D L162M",3
"lib1","SARS-CoV-2","ACTCTCCTTTACAAAC",6,111.18,8.97,-1.8,0.16,1.82,1.17,0.01,">1 nonsynonymous","S19E T148Y",2
"lib1","SARS-CoV-2","ACTCTCGATCAAACTA",2,24.69,10.71,-0.06,0.04,2.96,1.02,0,">1 nonsynonymous","I138V F160C T201V",3
"lib1","SARS-CoV-2","ACTCTCGCAAAATTAA",6,25.89,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33L I72H T148F",3
"lib1","SARS-CoV-2","ACTCTCTTCAAAAGAG",2,22.36,10.73,-0.04,0.08,2.96,1,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","ACTCTGAAATTACCTA",3,166.9,10.8,0.03,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCTGAACAAATATG",3,46.4,10.87,0.1,0.1,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTCTGATCTCAATAC",1,37.81,10.68,-0.09,0.07,2.92,1.07,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","ACTCTGCAGCCCCGAA",2,40.65,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N4L K128T P133L G166M",4
"lib1","SARS-CoV-2","ACTCTGCATTCGCCAT",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52F C61W G86K K128Y F167R",5
"lib1","SARS-CoV-2","ACTCTGCCATTCGAGT",2,105.77,9.98,-0.78,0.08,2.75,1.02,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","ACTCTGCGGTACAATC",3,88.96,10.17,-0.59,0.04,2.91,1.02,0,">1 nonsynonymous","L60I P169V",2
"lib1","SARS-CoV-2","ACTCTGGACCACTTAG",3,7.22,7.31,-3.45,0.3,1.5,1,0.04,">1 nonsynonymous","G9R R16A A18E V71M W106V G174I",6
"lib1","SARS-CoV-2","ACTCTGGACTTAAAAA",3,24.95,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V20E R27E A105E S139I G146I N151I",6
"lib1","SARS-CoV-2","ACTCTGGATAGCATTG",1,16.93,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K94N L131G P161F",3
"lib1","SARS-CoV-2","ACTCTGGCTGCACTTG",11,1.07,NA,NA,NA,NA,NA,NA,"stop","I28L V37N Y50L L95*",4
"lib1","SARS-CoV-2","ACTCTGGGAATACCCG",4,40.33,10.26,-0.5,0.07,2.75,1,0,">1 nonsynonymous","N13Y N40S T55N F160R",4
"lib1","SARS-CoV-2","ACTCTGGGTAAAGCAA",2,0.42,NA,NA,NA,NA,NA,NA,"stop","T46H S53F N64L K87* P96S P149Y A190S",7
"lib1","SARS-CoV-2","ACTCTGTAAAGCTTTA",4,38.53,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","K114W I138R P161H A190S",4
"lib1","SARS-CoV-2","ACTCTGTACTACTTTT",9,24.91,9.24,-1.52,0.38,1.5,1,0.07,">1 nonsynonymous","I28F V103H K132N P169M",4
"lib1","SARS-CoV-2","ACTCTGTATGAACATA",11,159.4,9.45,-1.31,0.08,1.8,1.1,0,"1 nonsynonymous","G86A",1
"lib1","SARS-CoV-2","ACTCTGTCAGCATAGT",2,55.09,10.74,-0.02,0.07,2.89,1.04,0,"1 nonsynonymous","F160D",1
"lib1","SARS-CoV-2","ACTCTGTGGAAATTAA",6,1.92,NA,NA,NA,NA,NA,NA,"stop","Y21* V52I Q84K D90I",4
"lib1","SARS-CoV-2","ACTCTGTTCCACCTTT",6,85.43,7.53,-3.24,0.3,1.5,1.15,0.03,">1 nonsynonymous","D34C L122G F134S Q144M",4
"lib1","SARS-CoV-2","ACTCTGTTGATGCCTT",1,20.58,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","F44K C150G",2
"lib1","SARS-CoV-2","ACTCTTAAAAAACAGA",2,52.42,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y121S Y143L Q168I Q176T",4
"lib1","SARS-CoV-2","ACTCTTAACATACGCG",1,0.59,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","ACTCTTAACCGAACTA",4,10.02,8.21,-2.56,0.5,1.75,1.12,0.06,">1 nonsynonymous","I2R N13F A33S T100V K132I I142Y",6
"lib1","SARS-CoV-2","ACTCTTAAGGTGGCTA",3,38.04,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","C61S R179G",2
"lib1","SARS-CoV-2","ACTCTTAATACTAACC",1,24.51,10.59,-0.17,0.07,2.87,1.07,0,">1 nonsynonymous","L5A K87A D97L",3
"lib1","SARS-CoV-2","ACTCTTACGACCTCGA",2,88.03,9.24,-1.53,0.18,1.84,1.19,0.02,">1 nonsynonymous","Q84R N107T",2
"lib1","SARS-CoV-2","ACTCTTACTTCTTCCT",2,43.11,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","S45L N58T T85K G146Y C150S",5
"lib1","SARS-CoV-2","ACTCTTAGTAATAAAC",3,9.15,10.75,-0.02,0.09,2.88,1.1,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACTCTTATAGTTCTTG",1,15.05,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K26R P161F",2
"lib1","SARS-CoV-2","ACTCTTATGACAGCAT",1,6.46,6,-4.76,2,1.5,1.02,0.01,">1 nonsynonymous","G9L F17L V103L",3
"lib1","SARS-CoV-2","ACTCTTATGACTAAAA",6,1.47,NA,NA,NA,NA,NA,NA,"stop","C6* N40T C61P S113P P133A",5
"lib1","SARS-CoV-2","ACTCTTATGCAATACA",4,52.72,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T15W R25P C49R L122R N157T",5
"lib1","SARS-CoV-2","ACTCTTATGTGGCGCT",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V E10T G51C K198M",4
"lib1","SARS-CoV-2","ACTCTTATTCCAAAAA",2,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A D90W",2
"lib1","SARS-CoV-2","ACTCTTCACATTGCAG",2,7.77,10.66,-0.1,0.14,2.95,1,0.02,">1 nonsynonymous","D98T N151S",2
"lib1","SARS-CoV-2","ACTCTTCTAGAGATAT",5,8.72,6.47,-4.3,2,3,1.25,0.01,">1 nonsynonymous","G9S G83M G86D V103N D137F G174F",6
"lib1","SARS-CoV-2","ACTCTTGATACGGGCA",10,99.79,10.73,-0.03,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTCTTGCCATTGCAT",1,25.18,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S29T S69W G152R L162K Y175I",5
"lib1","SARS-CoV-2","ACTCTTGCGCAAAACG",2,34.28,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20M V173C",2
"lib1","SARS-CoV-2","ACTCTTGCTGGTTCAG",12,1.73,NA,NA,NA,NA,NA,NA,"stop","Y66R F156*",2
"lib1","SARS-CoV-2","ACTCTTGTACCGAATG",7,32.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T3P Y93G F99I F134C V173H",5
"lib1","SARS-CoV-2","ACTCTTTAACAAAAAC",1,16.23,9.68,-1.08,0.15,1.85,1.11,0.01,">1 nonsynonymous","F12V P54Q R127G",3
"lib1","SARS-CoV-2","ACTCTTTCAAATAAAC",5,30.98,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N24Y S36R V115L N157L",4
"lib1","SARS-CoV-2","ACTCTTTCAATAGGTC",3,41.49,6,-4.76,2,3,1.16,0,">1 nonsynonymous","L38F T63R L95S T201Y",4
"lib1","SARS-CoV-2","ACTCTTTGTGCTGATA",6,44.04,10.75,-0.01,0.05,2.91,1.07,0,">1 nonsynonymous","E141G T201Q",2
"lib1","SARS-CoV-2","ACTGAAAAAAAAACTT",2,19.72,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A22L F99R",2
"lib1","SARS-CoV-2","ACTGAAAACATAATGC",1,2.75,NA,NA,NA,NA,NA,NA,"stop","C6S T15N S43L G116* Y178N",5
"lib1","SARS-CoV-2","ACTGAAAACCTCCACC",2,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C F44A V52N T85M Y123P E154A V181H",7
"lib1","SARS-CoV-2","ACTGAAAAGACTATCG",5,17.5,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y50L Y119I",2
"lib1","SARS-CoV-2","ACTGAAAAGGACGACC",6,53.39,8.87,-1.89,0.07,1.99,1.12,0,">1 nonsynonymous","L60I G116S G155V",3
"lib1","SARS-CoV-2","ACTGAAAAGGGATCCA",2,16.39,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D59E N92I I104S S139T",4
"lib1","SARS-CoV-2","ACTGAAAATATAAATG",11,4.29,NA,NA,NA,NA,NA,NA,"stop","N64* Q168K F185I",3
"lib1","SARS-CoV-2","ACTGAAAATGAGGAAT",2,34.51,10.39,-0.38,0.09,2.87,1,0,">1 nonsynonymous","D97S K128M I138M",3
"lib1","SARS-CoV-2","ACTGAAACCAGGGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","ACTGAAACCGCGTTAT",2,42.67,10.31,-0.46,0.04,2.89,1.07,0,">1 nonsynonymous","Y39E F62D Y66I",3
"lib1","SARS-CoV-2","ACTGAAACCGGCAAAT",5,11.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N40T C49T G101S T201W",4
"lib1","SARS-CoV-2","ACTGAAACTTAAGAAT",4,50.64,6.49,-4.27,0.42,1.5,1.17,0.02,">1 nonsynonymous","E10L F47Y S139Y",3
"lib1","SARS-CoV-2","ACTGAAAGAACTTAGT",3,0.39,NA,NA,NA,NA,NA,NA,"stop","P96N Y175R C195*",3
"lib1","SARS-CoV-2","ACTGAAAGCAATGCGA",8,31.22,7.67,-3.09,0.31,1.5,1.09,0.03,">1 nonsynonymous","Y66A Y91D P197M",3
"lib1","SARS-CoV-2","ACTGAAATAAGGACAA",3,45.79,7.72,-3.04,0.4,1.5,1,0.07,">1 nonsynonymous","D34C G172D",2
"lib1","SARS-CoV-2","ACTGAAATTACTAAAT",4,4.19,NA,NA,NA,NA,NA,NA,"stop","L5K D34R F44Y N151*",4
"lib1","SARS-CoV-2","ACTGAACAAAAAGTAC",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C N64E T170S",3
"lib1","SARS-CoV-2","ACTGAACAACTACTCG",2,60.59,9.64,-1.12,0.12,2.2,1.12,0.01,">1 nonsynonymous","D59A N64C N107S T148D",4
"lib1","SARS-CoV-2","ACTGAACAAGCTGGGT",3,89.63,10.67,-0.1,0.08,2.87,1.1,0,">1 nonsynonymous","D59F T100V V115K",3
"lib1","SARS-CoV-2","ACTGAACACAACTCCA",1,87.02,10.4,-0.36,0.05,2.9,1.06,0,">1 nonsynonymous","V37Q F44W T55K F62L D98N G116L K128T P197L",8
"lib1","SARS-CoV-2","ACTGAACATAACTCTA",7,41.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56M I72F S139V E154V",4
"lib1","SARS-CoV-2","ACTGAACATAGATAAT",1,29.44,10.13,-0.64,0.12,2.71,1,0,">1 nonsynonymous","K26F D90C T201Q",3
"lib1","SARS-CoV-2","ACTGAACCAGAGTAAA",2,27.01,10.33,-0.43,0.08,2.83,1,0,">1 nonsynonymous","R16S A67V F134L",3
"lib1","SARS-CoV-2","ACTGAACCGAGGTACT",5,18.47,6.85,-3.91,0.6,1.5,1.13,0.05,">1 nonsynonymous","K56T P82S N110P G146L",4
"lib1","SARS-CoV-2","ACTGAACCTCCAGTAA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","A22Y F47* C61* Y123W F156H",5
"lib1","SARS-CoV-2","ACTGAACGTGTCATTT",2,56.22,10.42,-0.34,0.04,2.97,1.01,0,">1 nonsynonymous","Y121L E141T",2
"lib1","SARS-CoV-2","ACTGAAGAATTTGGAA",1,19.77,10.66,-0.1,0.06,3,1,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","ACTGAAGATACGACTA",12,177.86,10.13,-0.64,0.08,2.46,1.02,0,"1 nonsynonymous","V52R",1
"lib1","SARS-CoV-2","ACTGAAGATACGTAAT",7,44.7,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S36I L60M A81P V103G Y143S E154N",6
"lib1","SARS-CoV-2","ACTGAAGCTTCGGCGG",2,77.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37M T55L N157T Y175S",4
"lib1","SARS-CoV-2","ACTGAAGGAAAAACGA",1,10.58,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","R27Y A81L D112E G166M P177M",5
"lib1","SARS-CoV-2","ACTGAAGGAACACAGC",2,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M Y39F P96Y",3
"lib1","SARS-CoV-2","ACTGAAGGCCATAAAA",5,18.09,6,-4.76,2,3,1.12,0,"1 nonsynonymous","I80E",1
"lib1","SARS-CoV-2","ACTGAAGGCTCACTAC",2,0.34,NA,NA,NA,NA,NA,NA,"stop","T3A A22L F99Y Y143*",4
"lib1","SARS-CoV-2","ACTGAAGGTTATAATA",9,100.88,6,-4.76,1.2,1.5,1.2,0.02,">1 nonsynonymous","N64S C102F P133L I142L",4
"lib1","SARS-CoV-2","ACTGAATAACGATAAC",1,15.9,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","C6L S69I K128T",3
"lib1","SARS-CoV-2","ACTGAATAACTTGAAC",1,0.25,NA,NA,NA,NA,NA,NA,"stop","K114N L122A T140K G152* F167L",5
"lib1","SARS-CoV-2","ACTGAATCACAAAGCC",1,15.81,10.14,-0.63,0.09,2.73,1.05,0,"1 nonsynonymous","Y35D",1
"lib1","SARS-CoV-2","ACTGAATCTAACAGGA",2,43.58,6,-4.76,1.78,3,1.1,0,">1 nonsynonymous","I2S C61K D112M Y165V",4
"lib1","SARS-CoV-2","ACTGAATCTAGTTGAA",6,32.11,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R16F Y35L V77T Q84L D90H W106L K114T G152S",8
"lib1","SARS-CoV-2","ACTGAATGAACGCAAC",1,17.67,6,-4.76,2,2.24,1.28,0.01,">1 nonsynonymous","W106V S113Y",2
"lib1","SARS-CoV-2","ACTGAATTCGATAGAA",2,73.88,10.45,-0.32,0.05,2.89,1.06,0,">1 nonsynonymous","G51Q V52L",2
"lib1","SARS-CoV-2","ACTGAATTTAAGAAAA",4,0.83,NA,NA,NA,NA,NA,NA,"stop","D98* Y119G",2
"lib1","SARS-CoV-2","ACTGAATTTTACCAAG",3,43.18,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D59A G86F R124L",3
"lib1","SARS-CoV-2","ACTGACAAAAACATTT",6,79.14,10.75,-0.02,0.09,2.88,1.06,0,">1 nonsynonymous","T100L K128Y",2
"lib1","SARS-CoV-2","ACTGACAACGAATATT",4,0.65,NA,NA,NA,NA,NA,NA,"stop","I88D Y119* N171M T201M",4
"lib1","SARS-CoV-2","ACTGACAAGATACCGG",4,3.46,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib1","SARS-CoV-2","ACTGACACACTTATCA",2,132.51,10.74,-0.03,0.06,2.97,1,0,"1 nonsynonymous","G196A",1
"lib1","SARS-CoV-2","ACTGACACGCATTTGC",1,17.21,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F134I Q144V T201C",3
"lib1","SARS-CoV-2","ACTGACACGCGTGTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","V11S P96N Y123* N157E T201M",5
"lib1","SARS-CoV-2","ACTGACACTCATAATT",2,7.64,10.63,-0.14,0.09,2.94,1.1,0,">1 nonsynonymous","G9P Y39I",2
"lib1","SARS-CoV-2","ACTGACAGAGCAAGCT",3,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10G E76V T201D",4
"lib1","SARS-CoV-2","ACTGACAGGCGTAGCT",3,22.49,10.19,-0.57,0.09,2.78,1.04,0,">1 nonsynonymous","A18E P54S S164M",3
"lib1","SARS-CoV-2","ACTGACATAATATGTT",1,22.7,9.82,-0.95,0.13,2.05,1.02,0,">1 nonsynonymous","I80M N120S K198L",3
"lib1","SARS-CoV-2","ACTGACATAGTACGAA",1,11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R25I V77M V153R G174F",4
"lib1","SARS-CoV-2","ACTGACATCTATTGCG",4,76.46,8.46,-2.31,0.14,2.53,1.16,0.01,">1 nonsynonymous","N64T F126S I138H",3
"lib1","SARS-CoV-2","ACTGACATGGGACATA",5,23.09,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","S53G P161Y",2
"lib1","SARS-CoV-2","ACTGACATGTCATGAT",2,14.42,9.64,-1.12,0.16,2.45,1.13,0.02,">1 nonsynonymous","C31H D97P K128P",3
"lib1","SARS-CoV-2","ACTGACATTTACAATT",4,21.77,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F8K W23R R25C",3
"lib1","SARS-CoV-2","ACTGACATTTGGCACC",5,64.83,10.59,-0.18,0.08,2.86,1.1,0,"1 nonsynonymous","E141A",1
"lib1","SARS-CoV-2","ACTGACCAACCACCAA",6,37.57,10.73,-0.04,0.06,2.94,1,0,"1 nonsynonymous","L111F",1
"lib1","SARS-CoV-2","ACTGACCACCATTAGC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W V71Q V77K K94R",4
"lib1","SARS-CoV-2","ACTGACCCCCCTACCG",1,6.52,9.6,-1.17,0.36,1.98,1.03,0.05,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","ACTGACCCCTCATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44N D59L A81K P133* T201Y",5
"lib1","SARS-CoV-2","ACTGACGCCGAACACC",5,2.5,NA,NA,NA,NA,NA,NA,"stop","L57G S129* A145S",3
"lib1","SARS-CoV-2","ACTGACGCGGCATAAT",3,24.23,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T55A I88G Y159V Y165G",4
"lib1","SARS-CoV-2","ACTGACGCGGTAGGTG",3,122.43,9.95,-0.82,0.11,2.21,1.03,0,">1 nonsynonymous","L38S L122Y",2
"lib1","SARS-CoV-2","ACTGACGGTACGTTAC",4,58.03,8.67,-2.09,0.27,1.5,1.18,0.02,">1 nonsynonymous","W23M P133A",2
"lib1","SARS-CoV-2","ACTGACTAAATATCAA",1,8.65,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","ACTGACTAATACGACC",15,10.33,NA,NA,NA,NA,NA,NA,"stop","Q84* D90T Y119H K128S Y159P",5
"lib1","SARS-CoV-2","ACTGACTATAACCCTA",2,17.22,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N4Y V103D P133N S164L A192C",5
"lib1","SARS-CoV-2","ACTGACTATGCCCCTT",1,9.03,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G86S D97P Q144L",3
"lib1","SARS-CoV-2","ACTGACTATGGCATAG",2,50.98,10.84,0.08,0.05,2.96,1,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","ACTGACTCAGCAATTC",1,16.94,10.68,-0.09,0.13,2.81,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTGACTCCTTCAGAT",2,45.71,6.41,-4.35,0.33,1.5,1.06,0.01,">1 nonsynonymous","S108K P177L",2
"lib1","SARS-CoV-2","ACTGACTCTCACTTAG",3,70.66,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6I K94T S108K",3
"lib1","SARS-CoV-2","ACTGACTTAAAAATAA",4,38.7,9.27,-1.49,0.14,1.78,1.16,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","ACTGACTTTACGAAAC",5,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G C158I V173P",3
"lib1","SARS-CoV-2","ACTGAGAACTACGATC",2,9.25,7.03,-3.73,0.5,1.5,1.08,0.07,">1 nonsynonymous","T3R L38Q N120L P133Y",4
"lib1","SARS-CoV-2","ACTGAGAAGGAAAAAA",1,7.07,6.49,-4.28,2,1.5,1.22,0.03,">1 nonsynonymous","G9S L95M V103G",3
"lib1","SARS-CoV-2","ACTGAGACATAATAAA",1,7.42,8.52,-2.24,0.34,1.68,1.03,0.03,">1 nonsynonymous","C6K A18C",2
"lib1","SARS-CoV-2","ACTGAGACGCAATTAA",10,179.15,10.77,0.01,0.06,2.9,1.05,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","ACTGAGACGCCCCGCA",3,42.25,7.71,-3.06,0.18,1.56,1.13,0.01,">1 nonsynonymous","D112E N157S T201S",3
"lib1","SARS-CoV-2","ACTGAGAGCGATATGT",5,60.28,10.7,-0.07,0.08,2.87,1.09,0,"1 nonsynonymous","T46L",1
"lib1","SARS-CoV-2","ACTGAGAGTAAGTGAC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","S36N F44V V115* S147*",4
"lib1","SARS-CoV-2","ACTGAGATATGCCACT",6,21.38,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F44D K87G N120L Q144L",4
"lib1","SARS-CoV-2","ACTGAGATTGTTACAT",3,36.65,10.53,-0.24,0.05,2.91,1.06,0,">1 nonsynonymous","T3P T148I",2
"lib1","SARS-CoV-2","ACTGAGCAAAGAGTTA",3,27.14,6.47,-4.29,0.6,1.5,1.22,0.03,">1 nonsynonymous","G101T S164M",2
"lib1","SARS-CoV-2","ACTGAGCAATCAGCGG",2,29.23,8.42,-2.35,0.19,1.84,1.07,0.01,">1 nonsynonymous","I2Q C61T N107H K128S",4
"lib1","SARS-CoV-2","ACTGAGCCACCCCTTG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F8M N30S T100*",3
"lib1","SARS-CoV-2","ACTGAGCCTATCTATG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","T63F G83T K132F N157V R179G K199*",6
"lib1","SARS-CoV-2","ACTGAGCGTTCTAGAA",2,7.26,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20N D68A",2
"lib1","SARS-CoV-2","ACTGAGGAATCATTGG",2,30.59,9.22,-1.54,0.1,2.9,1.1,0.01,"1 nonsynonymous","G117Y",1
"lib1","SARS-CoV-2","ACTGAGGGCGGTAGCG",5,54.89,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","E10G V181N",2
"lib1","SARS-CoV-2","ACTGAGGGGGTTATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* Y121S",2
"lib1","SARS-CoV-2","ACTGAGGGTGGGAAAT",5,45.5,9.39,-1.37,0.12,2.46,1.09,0.01,">1 nonsynonymous","Y121V I138D",2
"lib1","SARS-CoV-2","ACTGAGTAACGATTAA",2,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S N30I F99Y S113F Q144R E154Y",6
"lib1","SARS-CoV-2","ACTGAGTATATTTAAA",5,0.84,NA,NA,NA,NA,NA,NA,"stop","L60R Y91S D112* S184R",4
"lib1","SARS-CoV-2","ACTGAGTCAAATTGTC",1,18.07,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","F17K D90F",2
"lib1","SARS-CoV-2","ACTGAGTCGTTTAACG",1,119.89,10.78,0.01,0.07,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTGAGTGACTTCTAC",4,3.17,NA,NA,NA,NA,NA,NA,"stop","N1T N24V L38* Q84I F99S",5
"lib1","SARS-CoV-2","ACTGAGTGGATACCAC",2,37.88,9.78,-0.98,0.13,1.89,1.11,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","ACTGATAAAAAGTCTA",15,67.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y91T N151L N157P T201K",4
"lib1","SARS-CoV-2","ACTGATAAATGCAAAA",1,8.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M F160G",2
"lib1","SARS-CoV-2","ACTGATAAATTGCTCA",4,1.92,NA,NA,NA,NA,NA,NA,"stop","A33K N64H Y119L Y143F Q176* P197Q",6
"lib1","SARS-CoV-2","ACTGATAACATGTTGC",1,23.3,6.25,-4.52,0.49,1.84,1.1,0.01,">1 nonsynonymous","C150S G174A T201S",3
"lib1","SARS-CoV-2","ACTGATACAAGTTATT",2,24.62,6.97,-3.79,0.39,1.5,1.24,0.03,">1 nonsynonymous","L5E W106C G116M E154V",4
"lib1","SARS-CoV-2","ACTGATAGCGGGTGCG",2,9.55,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F70E G117P L125T K199M",4
"lib1","SARS-CoV-2","ACTGATAGTTAACAAC",7,36.51,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y66C D90G N110R E135F P149M L162S",6
"lib1","SARS-CoV-2","ACTGATATAAAAATTA",7,28.05,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","S41Q F47Y G51N G83R R124P",5
"lib1","SARS-CoV-2","ACTGATATCACTAAGA",4,58.54,8.67,-2.09,0.09,2.88,1.07,0,">1 nonsynonymous","Y143A S200Y",2
"lib1","SARS-CoV-2","ACTGATATGGGACAAA",1,24.31,8.09,-2.68,0.27,1.5,1.18,0.03,">1 nonsynonymous","I2L R127D",2
"lib1","SARS-CoV-2","ACTGATCCATACTCAA",1,43.72,8.14,-2.63,0.2,1.78,1.11,0.01,">1 nonsynonymous","F44S C61H G117Q G174K",4
"lib1","SARS-CoV-2","ACTGATCGCACAAACA",6,152.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2A R124F L188Y",3
"lib1","SARS-CoV-2","ACTGATCTTTATAGAT",4,7.15,6,-4.76,2,1.5,1.12,0.08,">1 nonsynonymous","A33V V77K N120T",3
"lib1","SARS-CoV-2","ACTGATGAATAACGTA",2,40.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23T Q84W P96N",3
"lib1","SARS-CoV-2","ACTGATGACAAATGAG",1,4.48,NA,NA,NA,NA,NA,NA,"stop","T3N L60Y E76K T201*",4
"lib1","SARS-CoV-2","ACTGATGATGTCCAAA",6,231.24,8.41,-2.36,0.12,2.72,1.03,0.01,">1 nonsynonymous","K48S Y175S",2
"lib1","SARS-CoV-2","ACTGATGTCGGTCTTG",2,42.81,8.48,-2.29,0.17,2.21,1.09,0.01,">1 nonsynonymous","A14K N64C G146M",3
"lib1","SARS-CoV-2","ACTGATGTTAATCGGT",2,19.31,9.88,-0.88,0.05,2.65,1.08,0,">1 nonsynonymous","N4L T55C",2
"lib1","SARS-CoV-2","ACTGATTACGAATAAA",1,7.76,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","D112H",1
"lib1","SARS-CoV-2","ACTGATTACGTTATAC",4,19.41,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","F8Q D34I D112H",3
"lib1","SARS-CoV-2","ACTGATTATACGCAAA",1,29.37,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P82S Y91V F99S N107Q S200I",5
"lib1","SARS-CoV-2","ACTGATTCAAACTCAA",3,1.26,NA,NA,NA,NA,NA,NA,"stop","T15* R136* P161L",3
"lib1","SARS-CoV-2","ACTGATTCAATCGTGA",4,26.08,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y35V S69V P82G",3
"lib1","SARS-CoV-2","ACTGATTGAAATATAA",1,6.84,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2R P177S F185T",3
"lib1","SARS-CoV-2","ACTGATTTGAAATTCG",2,25.29,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","D68L I72F I138P L183P",4
"lib1","SARS-CoV-2","ACTGCAAAAGTTTATT",2,12.77,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S43L D59S I72L A105M G116I K128T R136V",7
"lib1","SARS-CoV-2","ACTGCAAACGTAATAA",2,103.28,10.77,0.01,0.08,2.92,1.06,0,"1 nonsynonymous","D97M",1
"lib1","SARS-CoV-2","ACTGCAAATCACATAA",3,40.72,8.6,-2.16,0.15,2.66,1.03,0.01,">1 nonsynonymous","T170H G174V",2
"lib1","SARS-CoV-2","ACTGCAACAAAGTCCT",1,41.27,9.89,-0.87,0.08,2.48,1.09,0,">1 nonsynonymous","C31P S129L T201I",3
"lib1","SARS-CoV-2","ACTGCAACAACGTACG",6,95.15,8.54,-2.22,0.24,1.5,1.02,0.03,">1 nonsynonymous","D34Q S45F D98A",3
"lib1","SARS-CoV-2","ACTGCAACACAAGTAG",3,88.18,8.7,-2.07,0.07,2.59,1.07,0,">1 nonsynonymous","K87C F134T T170A",3
"lib1","SARS-CoV-2","ACTGCAAGAATATGGA",7,7.27,9.55,-1.21,0.33,2.27,1.34,0.04,">1 nonsynonymous","Q84S F99L",2
"lib1","SARS-CoV-2","ACTGCAAGACAACAAT",6,189.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11I A89K N120I I138G A145C",5
"lib1","SARS-CoV-2","ACTGCAATCAAAGTAA",4,18.06,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T15W A33P G86S R179Y",4
"lib1","SARS-CoV-2","ACTGCAATTCTATATC",6,52.72,6.62,-4.15,0.48,1.5,1.23,0.03,">1 nonsynonymous","G86M S139R",2
"lib1","SARS-CoV-2","ACTGCAATTTCTCCCC",3,0.11,NA,NA,NA,NA,NA,NA,"stop","N4Y L57K A67T P149K V153W Y178P T201*",7
"lib1","SARS-CoV-2","ACTGCACAAAGCCCCG",4,0.1,NA,NA,NA,NA,NA,NA,"stop","P82* F99D P169C",3
"lib1","SARS-CoV-2","ACTGCACACACAAAAC",7,81.93,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3S R25M V37G P82E S113W",5
"lib1","SARS-CoV-2","ACTGCACACCAGAGGA",8,68.88,8.22,-2.54,0.15,1.5,1.09,0.01,">1 nonsynonymous","P149S L162W",2
"lib1","SARS-CoV-2","ACTGCACATGGTCAAA",7,129.01,8.09,-2.67,0.14,2.21,1.15,0.01,">1 nonsynonymous","C61W S113M",2
"lib1","SARS-CoV-2","ACTGCACCATATCAGT",7,92.03,10.73,-0.03,0.04,2.89,1.04,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","ACTGCACTAATTAACA",2,31.99,10.49,-0.27,0.05,2.87,1.09,0,"1 nonsynonymous","K26S",1
"lib1","SARS-CoV-2","ACTGCACTAATTTTTA",7,39.7,10.64,-0.13,0.07,2.95,1.02,0,">1 nonsynonymous","L5C K56T",2
"lib1","SARS-CoV-2","ACTGCACTGCCTTGGT",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S P133R",2
"lib1","SARS-CoV-2","ACTGCAGAACGACTCG",1,6.97,9.25,-1.51,0.15,2.85,1.19,0.01,">1 nonsynonymous","F44I R78D L125S P149R",4
"lib1","SARS-CoV-2","ACTGCAGAATCAAGAA",2,34.87,10.59,-0.17,0.06,2.82,1.14,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","ACTGCAGACTACATGC",8,129.7,10.75,-0.01,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGCAGATAAGTCAG",4,11.56,8.75,-2.02,0.34,1.8,1.06,0.06,">1 nonsynonymous","S45I E76T I104N G117P Q144K V182Q",6
"lib1","SARS-CoV-2","ACTGCAGATTACCTTG",3,58.28,10.69,-0.07,0.06,2.88,1.08,0,"1 nonsynonymous","R16W",1
"lib1","SARS-CoV-2","ACTGCAGCTATTTGAG",2,35.33,9.52,-1.24,0.16,1.98,1.1,0.01,">1 nonsynonymous","A89N K114V",2
"lib1","SARS-CoV-2","ACTGCAGGTATGCCCA",6,95.93,8.48,-2.28,0.11,2.96,1.02,0.01,"1 nonsynonymous","N157F",1
"lib1","SARS-CoV-2","ACTGCAGTAAGACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* L60K I80S Y91T T100Y L125T",6
"lib1","SARS-CoV-2","ACTGCATACAACCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y P169N",2
"lib1","SARS-CoV-2","ACTGCATACATCGAAT",4,1.01,NA,NA,NA,NA,NA,NA,"stop","Y119* P149V",2
"lib1","SARS-CoV-2","ACTGCATTAGCGAATG",2,92.38,10.78,0.01,0.06,2.92,1.03,0,">1 nonsynonymous","A18S N64T",2
"lib1","SARS-CoV-2","ACTGCATTATCACCGG",2,64.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","P96R Q176P",2
"lib1","SARS-CoV-2","ACTGCATTTTACTATG",2,47.08,8.53,-2.24,0.11,2.87,1,0.01,">1 nonsynonymous","I104F N157Y",2
"lib1","SARS-CoV-2","ACTGCCAAGCTATCCC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L183S P197Q",2
"lib1","SARS-CoV-2","ACTGCCAGCGGTCAAT",3,34.32,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A14R V20W F167E",3
"lib1","SARS-CoV-2","ACTGCCATTAAACAAT",1,20.69,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S19R T55L D112Y",3
"lib1","SARS-CoV-2","ACTGCCATTTGACCAT",7,4.02,NA,NA,NA,NA,NA,NA,"stop","S41* S45P D75S A105G",4
"lib1","SARS-CoV-2","ACTGCCCAATAATTAC",3,14.09,7.12,-3.64,0.47,1.5,1.15,0.07,">1 nonsynonymous","N4R G74H V181A",3
"lib1","SARS-CoV-2","ACTGCCCACATAACTA",4,86.13,10.91,0.14,0.07,2.93,1.03,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","ACTGCCCCCACTTTTT",7,108.37,9.12,-1.64,0.11,2.24,1.11,0.01,">1 nonsynonymous","T3A V37G N118L",3
"lib1","SARS-CoV-2","ACTGCCCCTACGTCGA",8,146.92,10.22,-0.54,0.04,2.84,1.03,0,">1 nonsynonymous","R16I T55N P161A",3
"lib1","SARS-CoV-2","ACTGCCCGAACTATGC",6,48,10.62,-0.15,0.04,2.94,1.01,0,">1 nonsynonymous","Y39G C61K V173F",3
"lib1","SARS-CoV-2","ACTGCCCTTACTCACG",6,42.82,8.73,-2.03,0.13,2.66,1.07,0.01,">1 nonsynonymous","S36Q V52M F126R F160R",4
"lib1","SARS-CoV-2","ACTGCCGACAAGTAAA",8,79.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P82S P96G V103C F156L F167I",5
"lib1","SARS-CoV-2","ACTGCCGCATGTGACC",2,83.88,10.67,-0.1,0.05,2.96,1,0,">1 nonsynonymous","G83S K199H",2
"lib1","SARS-CoV-2","ACTGCCGCCATGCATA",1,52.87,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36I S45L N92R",3
"lib1","SARS-CoV-2","ACTGCCGCGCATCGTA",3,16.3,10.76,-0.01,0.06,2.94,1.05,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","ACTGCCGTACATAACA",2,21.38,9.63,-1.14,0.08,2.97,1,0,">1 nonsynonymous","N40Q N171L T201R",3
"lib1","SARS-CoV-2","ACTGCCGTCGAAAACA",1,15.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D137L T148S",2
"lib1","SARS-CoV-2","ACTGCCTTTGATTATG",4,65.07,10.06,-0.7,0.09,2.41,1.01,0,">1 nonsynonymous","A81S D90C",2
"lib1","SARS-CoV-2","ACTGCGAAAGCACATT",2,7.62,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","R27M I80F V103E G116K",4
"lib1","SARS-CoV-2","ACTGCGAATAAAAAGT",4,88.12,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D34Y Y39N G86Q A105M G116E Y121N",6
"lib1","SARS-CoV-2","ACTGCGAGTCTTAAAG",3,30.5,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F47G T55M D97R P177G A190M",5
"lib1","SARS-CoV-2","ACTGCGATGTCTCTAA",2,65.39,10.19,-0.58,0.07,2.73,1.03,0,">1 nonsynonymous","F44M D90K",2
"lib1","SARS-CoV-2","ACTGCGATTGGCAGAA",4,68.49,10.67,-0.1,0.06,2.84,1.06,0,">1 nonsynonymous","G9Y P149M",2
"lib1","SARS-CoV-2","ACTGCGCAAGATTAAC",2,5.88,10.43,-0.34,0.16,2.85,1.14,0.01,">1 nonsynonymous","S41A C195D",2
"lib1","SARS-CoV-2","ACTGCGCCGAATACAG",2,17.61,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","G9L D34R Y91M T100V I104Q P161Y",6
"lib1","SARS-CoV-2","ACTGCGCGACAATCCA",1,3.65,NA,NA,NA,NA,NA,NA,"stop","Y91* E154S",2
"lib1","SARS-CoV-2","ACTGCGCGCACCCCAA",2,11.27,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56P C102W G146S",3
"lib1","SARS-CoV-2","ACTGCGGGACAAAGTG",2,17.63,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N30M N109D Y123S C158V V181I",5
"lib1","SARS-CoV-2","ACTGCGGGCACTGCCT",7,29.64,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T55C A81I A89L",3
"lib1","SARS-CoV-2","ACTGCGTAAATATAAC",2,30.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L38K G86R N130I",3
"lib1","SARS-CoV-2","ACTGCGTAACCTAGAG",2,22.83,10.85,0.08,0.1,2.91,1.03,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","ACTGCGTCCAATCTAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122I",1
"lib1","SARS-CoV-2","ACTGCGTCCTTCATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","ACTGCTAACATGTAAG",1,18.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158M",1
"lib1","SARS-CoV-2","ACTGCTAATGTTGGAA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","D59C L95* N107D L125A T148D",5
"lib1","SARS-CoV-2","ACTGCTAATTTTCACG",2,87.11,10.12,-0.65,0.11,2.58,1.03,0,">1 nonsynonymous","T15R Y35E",2
"lib1","SARS-CoV-2","ACTGCTACCCATGTAA",4,86.12,10.27,-0.49,0.03,2.73,1.03,0,">1 nonsynonymous","N13R Q163L",2
"lib1","SARS-CoV-2","ACTGCTACTAACATTA",17,119.77,9.81,-0.95,0.1,1.92,1.09,0,">1 nonsynonymous","S41C G51V",2
"lib1","SARS-CoV-2","ACTGCTAGGATAAGTT",1,1.15,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACTGCTAGTCTACAAT",7,65.74,10.68,-0.08,0.05,2.9,1.08,0,"1 nonsynonymous","S43V",1
"lib1","SARS-CoV-2","ACTGCTCCAACAGCCA",5,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S41N G86V S113R N151T",5
"lib1","SARS-CoV-2","ACTGCTCCGAAGACAA",3,15.61,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P7S V103H G166L",3
"lib1","SARS-CoV-2","ACTGCTCGAACAATAT",1,31.84,10.51,-0.26,0.04,2.92,1.03,0,">1 nonsynonymous","T100V A105G",2
"lib1","SARS-CoV-2","ACTGCTCGCAACACTA",2,62.9,9.71,-1.06,0.05,2.94,1.02,0,"1 nonsynonymous","Y159F",1
"lib1","SARS-CoV-2","ACTGCTCGCAACGTAA",2,79.69,8.91,-1.85,0.11,2.3,1.16,0.01,">1 nonsynonymous","R127K G146T",2
"lib1","SARS-CoV-2","ACTGCTCGTTATAAAG",5,166.11,8.64,-2.12,0.12,2.59,1.06,0.01,">1 nonsynonymous","T3L S113M",2
"lib1","SARS-CoV-2","ACTGCTCTATAGAGTC",3,7,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","I28W I72F K128R",3
"lib1","SARS-CoV-2","ACTGCTCTCACACTTA",4,15.62,9.92,-0.84,0.23,2.32,1.15,0.02,">1 nonsynonymous","A42M K94M",2
"lib1","SARS-CoV-2","ACTGCTCTCCTTTTCT",6,43.28,10.78,0.02,0.09,2.91,1.03,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","ACTGCTCTCTAAACCC",2,12.42,8.78,-1.99,0.17,1.85,1.05,0.01,">1 nonsynonymous","G116L E135I A145S",3
"lib1","SARS-CoV-2","ACTGCTGAAAGAAAAT",4,54.17,10.7,-0.07,0.08,2.9,1.1,0,"1 nonsynonymous","Q168A",1
"lib1","SARS-CoV-2","ACTGCTGAACTAGTTA",1,35.77,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F44G Y91S Y119D D137P A190T",5
"lib1","SARS-CoV-2","ACTGCTGATAGAATTA",2,94.05,8.95,-1.81,0.09,2.71,1.17,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","ACTGCTGGTTCGGAAC",3,122.97,10.81,0.05,0.06,2.87,1.09,0,">1 nonsynonymous","P7N Q163H",2
"lib1","SARS-CoV-2","ACTGCTTAAACTCTAA",2,10.19,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N1W N40K D68N E76F G116T N151V",6
"lib1","SARS-CoV-2","ACTGCTTCAAAAATAC",6,6.41,7.74,-3.03,2,1.5,1.13,0.02,">1 nonsynonymous","Y175H S200K",2
"lib1","SARS-CoV-2","ACTGCTTCCAGGGGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G E154V",2
"lib1","SARS-CoV-2","ACTGCTTCTGCACACC",4,28.38,10.81,0.05,0.11,2.86,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTGCTTCTGTCGCCG",9,47.23,8.3,-2.47,0.18,1.5,1.12,0.01,">1 nonsynonymous","P82G G174M",2
"lib1","SARS-CoV-2","ACTGCTTTCTGTTAAA",3,60.84,10.62,-0.14,0.09,2.91,1.04,0,"1 nonsynonymous","L188F",1
"lib1","SARS-CoV-2","ACTGCTTTCTTCTCTA",4,33.93,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C6H A67C P133Q",3
"lib1","SARS-CoV-2","ACTGGAAAATTTACCC",3,6.87,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15Q T55V A67N D97T N107H G117P G152Y",7
"lib1","SARS-CoV-2","ACTGGAAACGTCAATT",3,47.04,10.04,-0.72,0.06,2.87,1.03,0,">1 nonsynonymous","P7K T55C S184Y",3
"lib1","SARS-CoV-2","ACTGGAAAGAAACTAT",7,0.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACTGGAAAGAGACCAA",1,13.7,9.86,-0.91,0.13,2.73,1.03,0.01,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","ACTGGAAATCTAACCT",10,117.74,10.39,-0.38,0.04,2.87,1.04,0,">1 nonsynonymous","L5I E10G C61T P149R",4
"lib1","SARS-CoV-2","ACTGGAAATGTCCGGT",7,117.71,10.07,-0.7,0.06,2.27,1.03,0,">1 nonsynonymous","N40V S129I K199D",3
"lib1","SARS-CoV-2","ACTGGAAATTACTTCC",1,55.76,8.42,-2.34,0.13,2.24,1.2,0.01,">1 nonsynonymous","I2L I142R P149D H189F",4
"lib1","SARS-CoV-2","ACTGGAACCCGCGCGA",5,61.93,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","D112E C150F Y178Q",3
"lib1","SARS-CoV-2","ACTGGAATAAAGGGAA",1,47.29,7.75,-3.02,0.28,1.5,1.13,0.02,">1 nonsynonymous","G9K Y143K",2
"lib1","SARS-CoV-2","ACTGGAATAAGATGTA",4,76.58,8.55,-2.21,0.11,2.75,1.09,0.01,">1 nonsynonymous","Y39M N118S G155L",3
"lib1","SARS-CoV-2","ACTGGAATGCGATGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S41G D97L C102Y",4
"lib1","SARS-CoV-2","ACTGGACACGCGTCCA",10,64.91,6.11,-4.66,1,1.5,1.25,0.03,">1 nonsynonymous","L60T D97F Y123H G155W",4
"lib1","SARS-CoV-2","ACTGGACAGATAATTT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","T15H R27L L95N V103* F185K",5
"lib1","SARS-CoV-2","ACTGGACATACAACCC",4,19.19,10.83,0.06,0.08,2.96,1.01,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","ACTGGACGAAGTTTGG",2,1.51,NA,NA,NA,NA,NA,NA,"stop","V20Y G51*",2
"lib1","SARS-CoV-2","ACTGGACGGCACAGGA",4,59.3,10.78,0.01,0.07,2.92,1.06,0,">1 nonsynonymous","G9A G152K",2
"lib1","SARS-CoV-2","ACTGGACTAAACGGAG",6,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W G83V D97G",3
"lib1","SARS-CoV-2","ACTGGACTACATTCGT",1,9.86,10.94,0.18,0.09,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGGAGCACAAATCA",2,53.3,10.7,-0.07,0.05,2.9,1.03,0,"1 nonsynonymous","K26L",1
"lib1","SARS-CoV-2","ACTGGAGGCAAACACT",1,10.09,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L95G W106K",2
"lib1","SARS-CoV-2","ACTGGAGTAACATACT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","D59* R136L P149R P169Y",4
"lib1","SARS-CoV-2","ACTGGAGTCGTGCCTA",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70D T85S T100A N118T K132L T201Q",6
"lib1","SARS-CoV-2","ACTGGATATACCAGGA",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A T63F F99K",3
"lib1","SARS-CoV-2","ACTGGCAACAGCAAAA",6,120.11,10.54,-0.23,0.04,2.92,1,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","ACTGGCAAGGCTATCA",3,66.22,10.83,0.06,0.1,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGGCACATTGAGTA",6,86.93,9.86,-0.91,0.11,2.35,1.03,0.01,">1 nonsynonymous","P96D G116A",2
"lib1","SARS-CoV-2","ACTGGCAGCACTGGCT",1,16.22,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6L K56I K87G D112G P133V C150V F185N",7
"lib1","SARS-CoV-2","ACTGGCATTATCTAAT",5,0.11,NA,NA,NA,NA,NA,NA,"stop","A33H P82R N107G S108L R127L G166* G174R",7
"lib1","SARS-CoV-2","ACTGGCCCCATCCACG",4,34.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15L P82M N107Q S113N R136L",5
"lib1","SARS-CoV-2","ACTGGCCGCAAGTAGC",1,14.01,8.3,-2.46,0.14,1.5,1.08,0.01,">1 nonsynonymous","Y66H P149Q P161E",3
"lib1","SARS-CoV-2","ACTGGCCTAACGAAAG",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62H I104K N107C K128G G174A",5
"lib1","SARS-CoV-2","ACTGGCCTACGCAGCC",4,42.95,6,-4.76,1.02,1.5,1.15,0.01,">1 nonsynonymous","L38A Y93L",2
"lib1","SARS-CoV-2","ACTGGCGCAGCGCAAA",2,55.41,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y39N L57T V77Q G86R Y93S T100G",6
"lib1","SARS-CoV-2","ACTGGCGGATCTTAAC",5,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y K94I E141H Q168P",4
"lib1","SARS-CoV-2","ACTGGCGTCCGAATCT",1,31.77,10.6,-0.16,0.04,2.95,1.04,0,">1 nonsynonymous","L5W G51R",2
"lib1","SARS-CoV-2","ACTGGCTATTTCTCAT",1,43.39,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N4Y R78S R124I L131W K132G",5
"lib1","SARS-CoV-2","ACTGGCTCGATACTAC",6,23.71,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D98L K128V V181P",3
"lib1","SARS-CoV-2","ACTGGGCATCGTTATA",1,7.11,7.27,-3.5,0.28,1.5,1.09,0.03,">1 nonsynonymous","F62L C102Y",2
"lib1","SARS-CoV-2","ACTGGGCCCAAGATCC",2,27.82,10.15,-0.62,0.14,2.26,1,0.02,">1 nonsynonymous","F47S T100M",2
"lib1","SARS-CoV-2","ACTGGGCTGTTGCAGG",2,16.48,8.86,-1.91,0.25,1.5,1.09,0.03,">1 nonsynonymous","Y66S Q84M Y91S N120A",4
"lib1","SARS-CoV-2","ACTGGGGACAGGCAAA",6,42.51,9.43,-1.33,0.18,1.8,1.14,0.01,"1 nonsynonymous","I28R",1
"lib1","SARS-CoV-2","ACTGGGGACGCACGGC",9,44.11,6,-4.76,1.66,1.5,1.17,0.02,">1 nonsynonymous","I72R C102D",2
"lib1","SARS-CoV-2","ACTGGGGCATAAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13Y S19K D59Y E141* P149T",5
"lib1","SARS-CoV-2","ACTGGGTAACAGGTAT",5,0.6,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib1","SARS-CoV-2","ACTGGGTAAGAGAAAA",6,112.74,6.3,-4.46,0.42,1.5,1.16,0.01,">1 nonsynonymous","N64T K87E N171K",3
"lib1","SARS-CoV-2","ACTGGGTGCCCATAGT",4,26.96,6.24,-4.53,0.55,1.5,1.17,0.02,">1 nonsynonymous","F156T Y165G",2
"lib1","SARS-CoV-2","ACTGGGTGTCATCTCA",5,33.66,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F17C N118L I142F G152H T201C",5
"lib1","SARS-CoV-2","ACTGGGTTTAGAAGTA",5,5.36,NA,NA,NA,NA,NA,NA,"stop","N1* P197T",2
"lib1","SARS-CoV-2","ACTGGTAGACTTACGT",5,70.59,8.68,-2.09,0.16,1.55,1.16,0.01,">1 nonsynonymous","G86H K128P",2
"lib1","SARS-CoV-2","ACTGGTAGAGGGATAT",5,24.38,9.16,-1.61,0.33,1.5,1,0.05,">1 nonsynonymous","I2K F47C V103P N151M",4
"lib1","SARS-CoV-2","ACTGGTCCACGCAATT",1,13.56,6,-4.76,2,3,1.09,0.01,"1 nonsynonymous","V182G",1
"lib1","SARS-CoV-2","ACTGGTCCTAAAAATA",1,16,6.2,-4.57,1.49,1.5,1.19,0.05,">1 nonsynonymous","A14L G51F",2
"lib1","SARS-CoV-2","ACTGGTCTGAGAAAGG",2,10.79,10.16,-0.61,0.12,2.87,1,0.01,">1 nonsynonymous","S139F T148E",2
"lib1","SARS-CoV-2","ACTGGTGGTGACTCTA",2,29.2,9.95,-0.82,0.12,2.09,1.06,0.01,">1 nonsynonymous","T100Y A105Q S200T",3
"lib1","SARS-CoV-2","ACTGGTGTTAATACAG",3,33.95,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19M I88T L125V",3
"lib1","SARS-CoV-2","ACTGGTTCAAAATGTA",1,19.49,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N64W S69I T85M A105I W106R",5
"lib1","SARS-CoV-2","ACTGGTTGGGGCCAAA",1,18.79,10.56,-0.2,0.15,2.95,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTGTAAAATACTAAA",1,31.63,9.16,-1.61,0.2,1.5,1.14,0.03,">1 nonsynonymous","P133L S164W",2
"lib1","SARS-CoV-2","ACTGTAAAATGCTCCA",5,46.44,8.67,-2.1,0.27,1.5,1.16,0.03,">1 nonsynonymous","A14T K56W E141C",3
"lib1","SARS-CoV-2","ACTGTAAACATCACTC",2,0.11,NA,NA,NA,NA,NA,NA,"stop","N4Y C61G F99*",3
"lib1","SARS-CoV-2","ACTGTAAACTGATGTT",19,185.99,10.03,-0.74,0.07,2.16,1.06,0,">1 nonsynonymous","S19G D59M",2
"lib1","SARS-CoV-2","ACTGTAAATCATTTGC",1,22.56,10.05,-0.72,0.1,2.71,1.02,0,">1 nonsynonymous","T55V I142Q",2
"lib1","SARS-CoV-2","ACTGTAAATGCTACTA",1,29.05,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","C61A R124W I142N T148N",4
"lib1","SARS-CoV-2","ACTGTAACATGAATTT",9,148.24,10.36,-0.41,0.04,2.89,1.03,0,">1 nonsynonymous","V77L K128V P149L",3
"lib1","SARS-CoV-2","ACTGTAACCCTTTCAA",3,11.33,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14S D68K G172L",3
"lib1","SARS-CoV-2","ACTGTAACCTATGATA",4,119.71,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T85S P96W Q176M",3
"lib1","SARS-CoV-2","ACTGTAACCTGAACAT",5,71.54,10.77,0.01,0.05,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTGTAAGAAACAGGG",3,7.46,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14S C31E S43C G51T P82R K114L Y119K F134T",8
"lib1","SARS-CoV-2","ACTGTAATAACGATCT",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q Q168M S200K",3
"lib1","SARS-CoV-2","ACTGTAATATTCAGAC",10,55.01,10.68,-0.08,0.04,2.99,1,0,">1 nonsynonymous","N120V F160A S200W",3
"lib1","SARS-CoV-2","ACTGTAATCGGCTAAC",1,20.76,10.49,-0.28,0.13,2.76,1.06,0,">1 nonsynonymous","Y121V Q168W",2
"lib1","SARS-CoV-2","ACTGTAATCTCCCAAC",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141I C150T",2
"lib1","SARS-CoV-2","ACTGTACAAACTGAAA",3,69.53,10.56,-0.21,0.06,2.87,1.09,0,">1 nonsynonymous","T3G N24A",2
"lib1","SARS-CoV-2","ACTGTACCCATACACA",4,140.29,10.7,-0.07,0.08,2.93,1.07,0,"1 nonsynonymous","L5N",1
"lib1","SARS-CoV-2","ACTGTACCGAAGTCTA",2,13.07,6.29,-4.48,0.42,1.5,1.02,0.01,">1 nonsynonymous","W106E V115G Y143E G174P S200L",5
"lib1","SARS-CoV-2","ACTGTACCTTTAATCG",9,1.42,NA,NA,NA,NA,NA,NA,"stop","P96Y W106Y V173*",3
"lib1","SARS-CoV-2","ACTGTACGAGGTATAA",1,16.15,6,-4.76,2,3,1.06,0,">1 nonsynonymous","D34C V103L I138V",3
"lib1","SARS-CoV-2","ACTGTACTACGTCTCT",2,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W P133A",2
"lib1","SARS-CoV-2","ACTGTACTATCTTAGG",2,53.77,10.47,-0.29,0.03,2.98,1,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","ACTGTACTTCCAGTTC",24,132.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2L K94L D98V",3
"lib1","SARS-CoV-2","ACTGTATAAAAGTATC",1,14.39,6.44,-4.33,0.55,1.5,1.22,0.03,">1 nonsynonymous","K56G V71G",2
"lib1","SARS-CoV-2","ACTGTATAAACCACTG",6,141.69,10.69,-0.07,0.05,2.89,1.04,0,">1 nonsynonymous","I2L L60Y E141L T201A",4
"lib1","SARS-CoV-2","ACTGTATACAACCCTT",2,23.04,6,-4.76,1,3,1.04,0,">1 nonsynonymous","T63A I80E G174D",3
"lib1","SARS-CoV-2","ACTGTATACAGTTATA",5,69.73,10.58,-0.18,0.07,2.88,1.03,0,">1 nonsynonymous","A22Y A42M T201R",3
"lib1","SARS-CoV-2","ACTGTATATTCAGCAA",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K D68R S164I",3
"lib1","SARS-CoV-2","ACTGTATCCACGTCTG",8,65.62,6.41,-4.35,0.74,1.5,1.15,0.04,">1 nonsynonymous","E10R T55E F99A V181Y T201W",5
"lib1","SARS-CoV-2","ACTGTATGATCCTGAA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","I28G A105*",2
"lib1","SARS-CoV-2","ACTGTATGATGGAAAT",3,19.85,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","V37T C49F G83M K114G L122K C150T",6
"lib1","SARS-CoV-2","ACTGTCAACATGATAG",5,24.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F8T D90L Y121F R136V A190S",5
"lib1","SARS-CoV-2","ACTGTCAATACGTGCA",2,25.19,7.99,-2.78,0.34,1.5,1,0.05,">1 nonsynonymous","N58S D68N",2
"lib1","SARS-CoV-2","ACTGTCACCGCTACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N24* F44C T55G Y91L T140Y",5
"lib1","SARS-CoV-2","ACTGTCAGCCGATAAA",1,36.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9Q K87L N107H G155C",4
"lib1","SARS-CoV-2","ACTGTCATACTAGGAG",1,20.55,10.21,-0.56,0.09,2.83,1.02,0,">1 nonsynonymous","D98A G116V",2
"lib1","SARS-CoV-2","ACTGTCCCCATATAAA",4,4.86,NA,NA,NA,NA,NA,NA,"stop","T3D S19T D59* G146D",4
"lib1","SARS-CoV-2","ACTGTCCCCTTACCCT",5,0.59,NA,NA,NA,NA,NA,NA,"stop","D90R G166*",2
"lib1","SARS-CoV-2","ACTGTCCGATGAACTG",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S G83R F126M P133L",4
"lib1","SARS-CoV-2","ACTGTCCTTTAAAAAC",1,2.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44K",1
"lib1","SARS-CoV-2","ACTGTCGACATATTCA",2,46.21,9.96,-0.8,0.06,2.9,1.03,0,">1 nonsynonymous","N120K G146N",2
"lib1","SARS-CoV-2","ACTGTCTACTTGCGAT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","P133* G152T",2
"lib1","SARS-CoV-2","ACTGTCTCTATGCTCA",10,127.91,7.64,-3.12,0.14,1.5,1.13,0.01,">1 nonsynonymous","T140S N157V",2
"lib1","SARS-CoV-2","ACTGTGAACATGATAT",7,6.46,7.07,-3.69,0.41,1.5,1.09,0.05,">1 nonsynonymous","S43A C61D D75V S164D V181K F185R T201G",7
"lib1","SARS-CoV-2","ACTGTGAACGAGCTGT",6,125.64,10.75,-0.02,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGTGAATGAGACCA",4,86.47,10.34,-0.43,0.04,2.83,1.01,0,">1 nonsynonymous","D90L P149R",2
"lib1","SARS-CoV-2","ACTGTGACAGACATCG",1,22.26,10.68,-0.08,0.05,2.89,1.11,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","ACTGTGCACTACTACA",5,0.67,NA,NA,NA,NA,NA,NA,"stop","K114* P133Y G172P",3
"lib1","SARS-CoV-2","ACTGTGCCCCCTAGAC",4,291.41,8.54,-2.23,0.12,2.2,1.08,0.01,">1 nonsynonymous","K56V Y119G R136L",3
"lib1","SARS-CoV-2","ACTGTGCGTGTCACAT",7,62.89,10.6,-0.16,0.07,2.95,1.02,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","ACTGTGCTAAGCGAAG",5,72.39,10.91,0.14,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGTGGACAAGCCCT",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C A42P E76V K114S R179D",5
"lib1","SARS-CoV-2","ACTGTGGACAGAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S43A V77K A89*",3
"lib1","SARS-CoV-2","ACTGTGGTAAAACCAT",6,1.45,NA,NA,NA,NA,NA,NA,"stop","F8D E76* T100R",3
"lib1","SARS-CoV-2","ACTGTGGTCGAATCCG",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R N40L C49R D68I L125K G166L",6
"lib1","SARS-CoV-2","ACTGTGTCACAAGGTT",2,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52M D59V K87H P197A",4
"lib1","SARS-CoV-2","ACTGTGTGAGCCTGAT",1,16.6,10.82,0.06,0.08,2.85,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGTGTGTTCTCTAA",11,65.68,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R25E A33V T46Q S113W",4
"lib1","SARS-CoV-2","ACTGTGTTTTAGACGT",3,1.86,NA,NA,NA,NA,NA,NA,"stop","V52* N120I I138S",3
"lib1","SARS-CoV-2","ACTGTTAAGACAGGAA",1,15.7,6.1,-4.67,0.94,1.5,1.16,0.02,">1 nonsynonymous","S41Q I72V L95Y F99L H189Y",5
"lib1","SARS-CoV-2","ACTGTTAAGATTAACA",5,73.67,10.33,-0.44,0.06,2.77,1.01,0,">1 nonsynonymous","S41F G83S F160D",3
"lib1","SARS-CoV-2","ACTGTTAAGCCAAACT",4,18.06,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","K48G F99V I104N",3
"lib1","SARS-CoV-2","ACTGTTAAGGGCCTAA",11,78.39,10.75,-0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTGTTAATGACATCA",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T Y91H G101S",3
"lib1","SARS-CoV-2","ACTGTTAATGGACTAA",5,31.07,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","K87G F99I F160L",3
"lib1","SARS-CoV-2","ACTGTTACGCAACTAG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","I2* D68* K114E R124H P169Y",5
"lib1","SARS-CoV-2","ACTGTTACGCATATTT",1,85.8,10.4,-0.36,0.04,2.87,1.02,0,">1 nonsynonymous","T3Y S41V V153H",3
"lib1","SARS-CoV-2","ACTGTTACTACCGCAT",2,18.36,6,-4.76,0.84,3,1.19,0.02,">1 nonsynonymous","V103S L125V",2
"lib1","SARS-CoV-2","ACTGTTACTCCGTACA",5,121.63,8.2,-2.56,0.15,2.36,1.14,0.01,">1 nonsynonymous","K87I G152S Q168K",3
"lib1","SARS-CoV-2","ACTGTTAGAGAACCCA",2,19.96,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L5F Y39S F99S V103L",4
"lib1","SARS-CoV-2","ACTGTTATACCAATTA",7,106.96,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N24T V52M L95V R127T F134L N157T Y178R A192S",8
"lib1","SARS-CoV-2","ACTGTTATATTTTGAT",10,57.49,6.24,-4.52,0.96,1.5,1.24,0.05,">1 nonsynonymous","L5S V77E A105R Y143L V173N",5
"lib1","SARS-CoV-2","ACTGTTCAACTAGAAA",1,34.09,9.73,-1.04,0.14,1.97,1.06,0.01,">1 nonsynonymous","K48L Q84R P96N",3
"lib1","SARS-CoV-2","ACTGTTCACACTTGAC",1,13,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D97S D112Q Y121L I142K L188R",5
"lib1","SARS-CoV-2","ACTGTTCCAATATCCG",2,569.53,10.43,-0.33,0.04,2.91,1.03,0,">1 nonsynonymous","E10R N64Y T201L",3
"lib1","SARS-CoV-2","ACTGTTCCTCACAGGG",12,119.69,6,-4.76,1.74,1.5,1.13,0.01,">1 nonsynonymous","S36V F44V A89K D98F",4
"lib1","SARS-CoV-2","ACTGTTCTCAGAGACT",5,36.28,6.22,-4.54,0.78,1.5,1.16,0.03,">1 nonsynonymous","S43T Y50P R73S",3
"lib1","SARS-CoV-2","ACTGTTGCAATTAGAA",1,14.32,10.86,0.09,0.09,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTGTTGGATTAATAA",13,196.88,10.74,-0.03,0.05,2.91,1.05,0,"1 nonsynonymous","D97P",1
"lib1","SARS-CoV-2","ACTGTTGGGCTTAAAA",4,11.11,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","D98A D112H H189P T201C",4
"lib1","SARS-CoV-2","ACTGTTGTAACTGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","L60C G86L G155T P169K G174R S184*",6
"lib1","SARS-CoV-2","ACTGTTGTATCCTAAA",4,22.12,6.81,-3.95,0.37,1.5,1.12,0.03,">1 nonsynonymous","S43H G83L K94P A105S Q144F P149L S200Y",7
"lib1","SARS-CoV-2","ACTGTTGTATTCCAAT",8,68.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E76Q K114W E135M C150Y",4
"lib1","SARS-CoV-2","ACTGTTTAAACGCGCA",2,44.38,9.81,-0.96,0.23,2.19,1,0.02,">1 nonsynonymous","S41P K48T S69T G155N",4
"lib1","SARS-CoV-2","ACTGTTTAAATGCCCT",4,30.19,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5S P133C I142R T201E",4
"lib1","SARS-CoV-2","ACTGTTTAATAAAGGG",3,18.46,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R25T K94G T100S F156M",4
"lib1","SARS-CoV-2","ACTGTTTAATTAGGTT",5,69.99,6,-4.76,0.76,1.5,1.13,0.01,">1 nonsynonymous","F12M D34A V65M P82E G86V Y165W T170G Y175F Q176K",9
"lib1","SARS-CoV-2","ACTGTTTACAAACTCG",2,0.32,NA,NA,NA,NA,NA,NA,"stop","Y35* L122S S129M V153W",4
"lib1","SARS-CoV-2","ACTGTTTACGAACTTG",2,35.59,10.64,-0.13,0.06,2.89,1.08,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","ACTGTTTAGAAGCACT",10,185.83,9.96,-0.8,0.08,2.23,1.04,0,">1 nonsynonymous","K26G T201S",2
"lib1","SARS-CoV-2","ACTGTTTATGATAATC",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T148F Y159S Q168G",3
"lib1","SARS-CoV-2","ACTGTTTCCTTTCGAT",4,49.99,10.39,-0.37,0.1,2.84,1,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","ACTGTTTGATTAAAGT",1,20.52,10.34,-0.42,0.07,2.98,1,0,">1 nonsynonymous","R16I D59L",2
"lib1","SARS-CoV-2","ACTGTTTGCAGTGCCT",15,96.51,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K56C Y91R Y121I",3
"lib1","SARS-CoV-2","ACTGTTTGCCCAAAAT",7,34.6,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10Y D34C D68L K87I V103K",5
"lib1","SARS-CoV-2","ACTTAAAAAAATCAGC",8,124.69,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28K D98Y A105M Y119T F160R",5
"lib1","SARS-CoV-2","ACTTAAAACAATGAAC",6,109.42,10.8,0.04,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAAAAGGCCCCAG",4,21.59,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N118A L131R",2
"lib1","SARS-CoV-2","ACTTAAAAGTCTTATT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","A18H F134*",2
"lib1","SARS-CoV-2","ACTTAAAATAGACGCT",3,42.63,9.62,-1.14,0.3,1.5,1.03,0.02,">1 nonsynonymous","A33R P96S Q163L",3
"lib1","SARS-CoV-2","ACTTAAAATGTGTGAC",1,79.88,8.49,-2.27,0.09,2.51,1.07,0,"1 nonsynonymous","Q176G",1
"lib1","SARS-CoV-2","ACTTAAACGCATTCAA",4,39.25,9.02,-1.75,0.05,2.72,1.12,0,">1 nonsynonymous","S41G K87E Q168S",3
"lib1","SARS-CoV-2","ACTTAAACTATGACGC",3,27.35,10.22,-0.54,0.04,2.89,1.05,0,">1 nonsynonymous","K87S D97Y",2
"lib1","SARS-CoV-2","ACTTAAACTCAGTACT",8,178.02,10.76,0,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAAAGTTCGAAAT",11,102.78,10.78,0.02,0.1,2.87,1.03,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","ACTTAAAGTTGAGAAA",3,24.17,6,-4.76,2,3,1.26,0.01,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","ACTTAAATCACCCAAC",4,43.49,10.17,-0.59,0.05,2.91,1.02,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","ACTTAAATTCTCACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G83* F99C G166*",3
"lib1","SARS-CoV-2","ACTTAACAAAAAGGCC",2,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P N107A F160K",3
"lib1","SARS-CoV-2","ACTTAACAAACTACTC",2,28.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2D G51M A81S K114S R136P",5
"lib1","SARS-CoV-2","ACTTAACAAATAGTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69E N107P",2
"lib1","SARS-CoV-2","ACTTAACAATAAGGCC",5,18.37,10.75,-0.02,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAACAATAGCTAT",6,76.77,10.77,0,0.08,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTTAACAGCTACTCA",7,256.38,10.65,-0.11,0.05,2.82,1.09,0,">1 nonsynonymous","K56V L122F",2
"lib1","SARS-CoV-2","ACTTAACCAGCTGCAA",2,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49M I88K L95S P161T",4
"lib1","SARS-CoV-2","ACTTAACTACAGAAAA",2,1.41,NA,NA,NA,NA,NA,NA,"stop","A42* I80L E141C",3
"lib1","SARS-CoV-2","ACTTAACTATTGACAT",3,71.44,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V32S V77Q K87E N92T C102L Y175W",6
"lib1","SARS-CoV-2","ACTTAAGAACATCCCA",1,15.81,9.08,-1.68,0.18,1.86,1.17,0.02,">1 nonsynonymous","V11S N130R P149W",3
"lib1","SARS-CoV-2","ACTTAAGAACATGAAG",3,23.3,9.77,-0.99,0.17,2.29,1,0.02,">1 nonsynonymous","Y66H K94H A145S",3
"lib1","SARS-CoV-2","ACTTAAGACCTCGAAA",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K N40V P82L F99I",4
"lib1","SARS-CoV-2","ACTTAAGCACATGAAT",1,10.71,7.42,-3.34,0.35,1.5,1.12,0.07,">1 nonsynonymous","N58V N107Y",2
"lib1","SARS-CoV-2","ACTTAAGCATAGACAA",6,18.71,6,-4.76,2,3,1.03,0,">1 nonsynonymous","C6V G86K",2
"lib1","SARS-CoV-2","ACTTAAGCTATATGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31K D59M D112S N151* S164H",5
"lib1","SARS-CoV-2","ACTTAAGGAAATTCAA",5,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R C61M V77W D90R F99L",5
"lib1","SARS-CoV-2","ACTTAAGTGCATGACA",3,7.15,9.38,-1.38,0.23,1.5,1.04,0.02,">1 nonsynonymous","W106C T140L",2
"lib1","SARS-CoV-2","ACTTAATAAAAAGACA",2,1.31,NA,NA,NA,NA,NA,NA,"stop","I2Y N13L S41Q T46* D137I G152* F167T G174C",8
"lib1","SARS-CoV-2","ACTTAATAAATGTGGT",4,20.62,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D98V V103F G146R",3
"lib1","SARS-CoV-2","ACTTAATAGAAGGGCA",10,64.16,9.09,-1.68,0.2,1.5,1.16,0.02,">1 nonsynonymous","L38I V115I F134D L162V",4
"lib1","SARS-CoV-2","ACTTAATAGGTGGTTT",13,186.24,10.14,-0.62,0.08,2.3,1,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","ACTTAATATAAGACGC",1,44.2,10.81,0.04,0.04,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTTAATCCAATGTCC",1,16.74,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A14G K48V P96K V103E F126S N151T",6
"lib1","SARS-CoV-2","ACTTAATGTAACACTG",3,0.54,NA,NA,NA,NA,NA,NA,"stop","A33* L95R T201E",3
"lib1","SARS-CoV-2","ACTTAATTTGCTTAAG",6,168.08,10.73,-0.03,0.05,2.85,1.09,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","ACTTAATTTTGACGAG",6,2.9,NA,NA,NA,NA,NA,NA,"stop","N64* Q79L R124F",3
"lib1","SARS-CoV-2","ACTTACAAACAAAACC",1,19.63,8.32,-2.44,0.26,1.5,1.1,0.03,">1 nonsynonymous","S29K K56A P96I V153K",4
"lib1","SARS-CoV-2","ACTTACAACCATCCTG",2,26.12,10.59,-0.17,0.07,2.96,1.04,0,">1 nonsynonymous","K56R L95I",2
"lib1","SARS-CoV-2","ACTTACAATACTAACA",3,46.96,10.81,0.05,0.04,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTACACATATTGAC",6,67.36,10.76,0,0.05,2.91,1.05,0,">1 nonsynonymous","V77L T140E",2
"lib1","SARS-CoV-2","ACTTACACTCCTCTCT",2,0.8,NA,NA,NA,NA,NA,NA,"stop","Y93P Q168*",2
"lib1","SARS-CoV-2","ACTTACACTCTGCTCC",3,9.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13R I88L",2
"lib1","SARS-CoV-2","ACTTACAGCGGACCAT",2,17.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S K87M P161E T201I",4
"lib1","SARS-CoV-2","ACTTACAGGGAGCTTT",6,125.91,10.7,-0.07,0.06,2.96,1.03,0,">1 nonsynonymous","G9F S129N",2
"lib1","SARS-CoV-2","ACTTACAGTTACACCG",5,40.4,8.6,-2.17,0.16,1.86,1.15,0.01,">1 nonsynonymous","S29E S139G T148E P161Q",4
"lib1","SARS-CoV-2","ACTTACATACTCGGCT",2,11.84,7.54,-3.23,0.25,1.5,1.15,0.03,">1 nonsynonymous","F12T Y35D F160L",3
"lib1","SARS-CoV-2","ACTTACATCGCCAAAC",2,7.85,6,-4.76,2,3,1.35,0.01,">1 nonsynonymous","L5C I28R F44I C61Y",4
"lib1","SARS-CoV-2","ACTTACATTCCAATAC",1,5.08,6,-4.76,2,3,1.24,0.03,">1 nonsynonymous","T3N N24V G83V C102L P149I",5
"lib1","SARS-CoV-2","ACTTACATTGTGTACC",1,6.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13I A18E Q144A",3
"lib1","SARS-CoV-2","ACTTACCAACTCGGCT",2,42.47,10.91,0.15,0.08,2.88,1.04,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","ACTTACCATCCCATAA",3,55.15,10.74,-0.03,0.11,2.76,1.09,0,">1 nonsynonymous","V32S T100F A192G",3
"lib1","SARS-CoV-2","ACTTACCATTGCAAAA",8,62.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35K L57N A89L S184L",4
"lib1","SARS-CoV-2","ACTTACCCCGGCGTGA",4,49.96,10.63,-0.13,0.05,2.94,1.05,0,">1 nonsynonymous","P54V T140L",2
"lib1","SARS-CoV-2","ACTTACCGAACCGCAT",1,41.68,6,-4.76,0.83,1.5,1.19,0.01,">1 nonsynonymous","G83F S129N C150E",3
"lib1","SARS-CoV-2","ACTTACCGACAAGTGA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","N4* Y119H",2
"lib1","SARS-CoV-2","ACTTACCGCTACAACA",5,32.02,6,-4.76,2,3,1.11,0,">1 nonsynonymous","D34I C49R Y121I G152S Y165E",5
"lib1","SARS-CoV-2","ACTTACCGGCATCCAA",5,165.64,10.76,-0.01,0.04,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTACCTAGACTATT",9,93.64,10.73,-0.04,0.05,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTACCTGGTAATAG",1,43.4,10.07,-0.7,0.07,2.85,1.01,0,">1 nonsynonymous","S113G E141G",2
"lib1","SARS-CoV-2","ACTTACGAGTTTTCAT",8,123.51,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N4T S41R R136D Q176L K198C",5
"lib1","SARS-CoV-2","ACTTACGATGCAGACG",9,2190.11,10.46,-0.3,0.03,2.91,1.01,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","ACTTACGATTTACAAA",1,11.42,6,-4.76,2,1.5,1.12,0.08,">1 nonsynonymous","N107S S113N R136P L187T",4
"lib1","SARS-CoV-2","ACTTACGGCAAAACTT",4,37.53,10.81,0.05,0.09,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTACGTAAAATACT",2,13.52,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13I A42P D98M D137R",4
"lib1","SARS-CoV-2","ACTTACGTAAATCCCA",5,213.98,6,-4.76,0.53,1.5,1.12,0,"1 nonsynonymous","P177Q",1
"lib1","SARS-CoV-2","ACTTACGTATATCCCC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","T100R V103S N120P D137G N157*",5
"lib1","SARS-CoV-2","ACTTACTAAATAAGAA",1,41.92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V20H L38S V71C Y93C",4
"lib1","SARS-CoV-2","ACTTACTACCACTGTT",2,95.77,8.48,-2.29,0.15,1.78,1.08,0.01,">1 nonsynonymous","T3P A42G I138L F167L A190D",5
"lib1","SARS-CoV-2","ACTTACTACCCTCAAA",1,18.85,6,-4.76,0.52,3,1.05,0,">1 nonsynonymous","T46N P54H P133S G146L G166T",5
"lib1","SARS-CoV-2","ACTTACTACTAATAGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","S45T Y66T G83R D90V V103* E135Y T201S",7
"lib1","SARS-CoV-2","ACTTACTCACCTGACC",1,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y V103G Y119K P133R I142M",5
"lib1","SARS-CoV-2","ACTTACTCCTACGGGC",5,2.52,NA,NA,NA,NA,NA,NA,"stop","R25E V37T K48I A89S F99I K114G N120* P149S",8
"lib1","SARS-CoV-2","ACTTACTGAGTAGCGA",8,151.74,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55W L60S G152L L162E",4
"lib1","SARS-CoV-2","ACTTACTTATAGGGTC",6,64.33,10.6,-0.16,0.12,2.8,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAGACAAAGATGA",1,20.3,9.95,-0.81,0.08,2.82,1.07,0,">1 nonsynonymous","N58L Q168N",2
"lib1","SARS-CoV-2","ACTTAGACTCATGATG",1,17.86,10.65,-0.11,0.13,2.87,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACTTAGAGAAAATTAC",6,50.46,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N58T G101D",2
"lib1","SARS-CoV-2","ACTTAGAGTAAAATTT",1,14.05,10.83,0.07,0.19,2.8,1.13,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ACTTAGATGTGACTAA",4,8.98,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","C6L K87E A105E",3
"lib1","SARS-CoV-2","ACTTAGCCAGCTCAGG",6,153.91,10.71,-0.06,0.05,2.89,1.05,0,">1 nonsynonymous","T100M F134Y T193I P197C",4
"lib1","SARS-CoV-2","ACTTAGCGACAGTCTC",10,53.79,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10W T63G A89W W106R G172V",5
"lib1","SARS-CoV-2","ACTTAGCGCAACCGGC",1,91.22,10.8,0.04,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAGGAAAAAGAAG",2,28.94,8.44,-2.32,0.16,2.41,1.13,0.01,">1 nonsynonymous","Y121P P169R",2
"lib1","SARS-CoV-2","ACTTAGGAAAATTGGA",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S A33S F44S T100G",4
"lib1","SARS-CoV-2","ACTTAGGAGGTAGCAG",4,0.15,NA,NA,NA,NA,NA,NA,"stop","K94D D137M T148* E154I",4
"lib1","SARS-CoV-2","ACTTAGGATTGCGTTC",8,23.18,6.75,-4.01,0.49,1.5,1.18,0.03,">1 nonsynonymous","D34S S53Y D68P D137G N157A",5
"lib1","SARS-CoV-2","ACTTAGGCTAAGCGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","V77K A105K S108* Y123L",4
"lib1","SARS-CoV-2","ACTTAGGGAAAATTCC",13,192.07,9.29,-1.48,0.11,2.01,1.1,0.01,">1 nonsynonymous","C31T N40T I142T T148E",4
"lib1","SARS-CoV-2","ACTTAGGTTATTTTCT",4,23.76,8.09,-2.68,0.26,1.5,1.07,0.02,">1 nonsynonymous","A81N G146R",2
"lib1","SARS-CoV-2","ACTTAGTAAAATCCAT",9,171.1,8.79,-1.98,0.08,2.77,1.1,0,">1 nonsynonymous","L125P P169Q",2
"lib1","SARS-CoV-2","ACTTAGTAACGGAGCG",3,189.05,10.66,-0.11,0.03,2.93,1.04,0,">1 nonsynonymous","T15K F134G",2
"lib1","SARS-CoV-2","ACTTAGTACACAGCAC",1,9.41,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11S L38V N58K D98R E141K",5
"lib1","SARS-CoV-2","ACTTAGTACGATAAAT",9,75.86,6,-4.76,1.14,1.5,1.22,0.01,">1 nonsynonymous","F44M D98G V103G K199S",4
"lib1","SARS-CoV-2","ACTTAGTACGCGCGCG",2,25.98,8.7,-2.06,0.13,2.91,1.06,0.01,">1 nonsynonymous","C61K N130K Q176E P197M",4
"lib1","SARS-CoV-2","ACTTAGTCATTTTCGC",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R K128S E154F V182T",4
"lib1","SARS-CoV-2","ACTTAGTCCGTATTCT",4,66.78,10.5,-0.27,0.17,2.6,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTTAGTTAAGAAGGG",1,7.87,10.75,-0.01,0.09,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTTATAAAATAAGAG",1,9.87,10.34,-0.43,0.18,2.81,1.05,0.01,">1 nonsynonymous","A42Y T148I",2
"lib1","SARS-CoV-2","ACTTATAAACCCGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35M I138*",2
"lib1","SARS-CoV-2","ACTTATAATAAGCCTT",7,113.02,8.95,-1.82,0.18,1.5,1.08,0.01,">1 nonsynonymous","D90G K94L K199T",3
"lib1","SARS-CoV-2","ACTTATAATGGATACG",2,0.16,NA,NA,NA,NA,NA,NA,"stop","L60P S147*",2
"lib1","SARS-CoV-2","ACTTATAATGTTAGTG",4,9.77,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","G51S V103D",2
"lib1","SARS-CoV-2","ACTTATACATTCTCGA",3,20.09,6.82,-3.94,0.36,1.5,1.13,0.02,">1 nonsynonymous","Y50L Q144K P149S",3
"lib1","SARS-CoV-2","ACTTATACATTGCAGA",1,31.06,9.53,-1.23,0.21,1.5,1.09,0.03,"1 nonsynonymous","V77W",1
"lib1","SARS-CoV-2","ACTTATACCTTGAATG",3,20.44,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D34A R127P G172V V182S",4
"lib1","SARS-CoV-2","ACTTATACGAACCAAA",3,35.43,10.49,-0.27,0.07,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTATACTCAACTGA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","Y50W P82N K94* W106N Y119H",5
"lib1","SARS-CoV-2","ACTTATACTCCAATGC",2,53.75,10.73,-0.04,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTATACTCGGCCAA",2,111.5,10.2,-0.56,0.07,2.67,1.01,0,">1 nonsynonymous","T15V L38I D90E",3
"lib1","SARS-CoV-2","ACTTATACTTATGAAT",2,24.03,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","N1R D98Y G117R K128F P149S",5
"lib1","SARS-CoV-2","ACTTATAGAAAAAATG",3,13.44,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","C6N N120P E141R Y175I T201S",5
"lib1","SARS-CoV-2","ACTTATATACCGAGGC",4,39.89,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L38V R124W P149M",3
"lib1","SARS-CoV-2","ACTTATCAAATAGATT",3,31.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L95N K114A F134R V173G",4
"lib1","SARS-CoV-2","ACTTATCAACAGGTTA",5,1.7,NA,NA,NA,NA,NA,NA,"stop","S43C P133* P161G",3
"lib1","SARS-CoV-2","ACTTATCACAAAGACG",4,51.44,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N30I L38A T170I V180Y",4
"lib1","SARS-CoV-2","ACTTATCATATTTAGA",2,34.99,8.68,-2.08,0.14,1.71,1.12,0.01,">1 nonsynonymous","W23R F160R",2
"lib1","SARS-CoV-2","ACTTATCATGATACCC",2,5.63,10.82,0.06,0.09,2.99,1.01,0,">1 nonsynonymous","K48S V153L",2
"lib1","SARS-CoV-2","ACTTATCCATGCATGG",1,35.69,10.77,0.01,0.1,2.91,1.05,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","ACTTATCGATTCGAAT",1,16.05,10.31,-0.45,0.09,2.8,1,0,">1 nonsynonymous","S45F N64C V173L",3
"lib1","SARS-CoV-2","ACTTATCTAATCAACT",3,71.98,10.75,-0.01,0.05,2.93,1.03,0,">1 nonsynonymous","I2G Y66L H189S",3
"lib1","SARS-CoV-2","ACTTATCTACAAAGTA",5,77.58,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44V K87L L125D N130A Q176T",5
"lib1","SARS-CoV-2","ACTTATCTCGACTCCA",2,25.26,8.48,-2.29,0.18,2.23,1.1,0.01,">1 nonsynonymous","S36R C61H Q84S Q168L S184L S200T",6
"lib1","SARS-CoV-2","ACTTATCTTTTTAATC",3,10.96,9.72,-1.05,0.17,1.97,1.04,0.01,">1 nonsynonymous","G9S T15W D34I",3
"lib1","SARS-CoV-2","ACTTATCTTTTTCCCC",7,52.1,9.85,-0.92,0.1,2.06,1.04,0,">1 nonsynonymous","I72M E154Q",2
"lib1","SARS-CoV-2","ACTTATGACTAACTTT",2,77.98,10.79,0.02,0.07,2.93,1.02,0,"1 nonsynonymous","P54I",1
"lib1","SARS-CoV-2","ACTTATGATAAGTTGC",2,30.42,10.42,-0.35,0.08,2.79,1.04,0,">1 nonsynonymous","V32F N120H Q144R",3
"lib1","SARS-CoV-2","ACTTATGCAAAACTAA",4,6.81,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A33S S43V N58C R124L G166N T193P",6
"lib1","SARS-CoV-2","ACTTATGCAATAAGAT",1,13.48,10.77,0,0.06,2.93,1,0,">1 nonsynonymous","N30R P149S",2
"lib1","SARS-CoV-2","ACTTATGCCGACAGAT",7,64.21,6,-4.76,2,3,1.21,0,">1 nonsynonymous","D68V Y119P E141S G196S",4
"lib1","SARS-CoV-2","ACTTATGGTAATTATA",1,7.2,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","I2Q W23D Y66F I72F R73I T148G",6
"lib1","SARS-CoV-2","ACTTATGTATAACTAA",9,107.5,10.81,0.04,0.09,2.88,1.09,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","ACTTATGTATACGCAA",2,20.35,6.16,-4.6,0.5,1.5,1.1,0.01,">1 nonsynonymous","K128L N157V",2
"lib1","SARS-CoV-2","ACTTATGTTCTCAAAT",2,23.66,10.2,-0.56,0.09,2.77,1,0,">1 nonsynonymous","C6I A42K C61G",3
"lib1","SARS-CoV-2","ACTTATTAATGAGTTT",8,82.09,8.82,-1.94,0.18,1.5,1.05,0.01,">1 nonsynonymous","F8Y S19E L38M",3
"lib1","SARS-CoV-2","ACTTATTACCGCCGAA",3,18.43,10.78,0.02,0.06,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTATTCTCAGAAAC",1,1.44,NA,NA,NA,NA,NA,NA,"stop","D59* G116V G146P",3
"lib1","SARS-CoV-2","ACTTATTCTTTTAACC",3,23.53,7.76,-3,0.34,1.5,1.09,0.05,">1 nonsynonymous","F8T I104D G146T",3
"lib1","SARS-CoV-2","ACTTATTGCTCAAGCA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","I2N F44K Q84* K128* K198S",5
"lib1","SARS-CoV-2","ACTTATTGGTAGCTAC",1,11.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y50R R73T Y93Q L125G",4
"lib1","SARS-CoV-2","ACTTATTTAACATAAC",2,23.16,7.7,-3.06,0.27,1.76,1.16,0.02,">1 nonsynonymous","R73Y E141L",2
"lib1","SARS-CoV-2","ACTTATTTAGCTCGAT",4,9.54,8.43,-2.33,0.33,1.71,1.08,0.06,">1 nonsynonymous","A33I Y119S L131T",3
"lib1","SARS-CoV-2","ACTTCAAACACAACAT",4,22.88,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y93T K114V Y119T P161M S200E",5
"lib1","SARS-CoV-2","ACTTCAAATACTTTTA",16,184.7,10.74,-0.03,0.06,2.86,1.1,0,">1 nonsynonymous","L5E N64D",2
"lib1","SARS-CoV-2","ACTTCAAATGGATGCT",2,7.46,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F62G T100P L122F Q176S F185G",5
"lib1","SARS-CoV-2","ACTTCAAATTAAGACC",1,18.08,10.47,-0.29,0.16,2.83,1.13,0.01,"1 nonsynonymous","A22S",1
"lib1","SARS-CoV-2","ACTTCAACAGGAAAAA",7,83.07,9.37,-1.39,0.2,1.5,1.1,0.02,">1 nonsynonymous","D90Y A105M",2
"lib1","SARS-CoV-2","ACTTCAACCTCACATA",2,0.91,NA,NA,NA,NA,NA,NA,"stop","G101Y N107V S129V I138* S184D",5
"lib1","SARS-CoV-2","ACTTCAACGGAAAAAT",10,172.18,10.8,0.04,0.06,2.92,1.05,0,">1 nonsynonymous","A190R P197G",2
"lib1","SARS-CoV-2","ACTTCAAGATAACCGC",1,14.97,8.46,-2.31,0.37,1.5,1.28,0.06,">1 nonsynonymous","D90W W106K",2
"lib1","SARS-CoV-2","ACTTCAAGCGGAGATT",3,25.99,8.38,-2.39,0.19,1.56,1.24,0.01,">1 nonsynonymous","G51A G83F Y143M",3
"lib1","SARS-CoV-2","ACTTCAAGTTTAAAAT",2,25.25,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","W23Q P82I R124S",3
"lib1","SARS-CoV-2","ACTTCAATTTACTTTA",3,57.65,10.65,-0.11,0.05,2.97,1,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","ACTTCACAGGAATCAA",2,22.39,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10M F99G",2
"lib1","SARS-CoV-2","ACTTCACGACATGTCC",7,2.05,NA,NA,NA,NA,NA,NA,"stop","V20R E135*",2
"lib1","SARS-CoV-2","ACTTCACGCGAAAAGA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","L5W E135V I142S G152S Y165*",5
"lib1","SARS-CoV-2","ACTTCACGGAACGACG",4,10.07,6,-4.76,2,1.5,1.13,0.08,">1 nonsynonymous","F12N Q84I N107L",3
"lib1","SARS-CoV-2","ACTTCAGACGCCGCCG",3,55.38,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25N S36L T46L K87Y L111H N120M",6
"lib1","SARS-CoV-2","ACTTCAGATTCCTGGT",3,81.7,10.78,0.01,0.06,2.94,1.02,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","ACTTCAGCCCTGCGTA",2,12.04,8.38,-2.38,0.44,1.75,1.1,0.04,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","ACTTCAGCTCGAACAC",4,110.86,10.73,-0.04,0.06,2.9,1.05,0,">1 nonsynonymous","Y39L K56S",2
"lib1","SARS-CoV-2","ACTTCAGGATAAAGTC",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84* D90N",2
"lib1","SARS-CoV-2","ACTTCAGGATCTATAA",8,156.17,10.42,-0.35,0.04,2.91,1.03,0,">1 nonsynonymous","F17Y K56Q",2
"lib1","SARS-CoV-2","ACTTCAGGGACAAATT",1,9.8,10.46,-0.3,0.18,2.76,1.15,0.02,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","ACTTCAGGTACTATTA",6,177.82,10.79,0.02,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTCAGTCCGATGTA",4,13.6,6,-4.76,0.89,2.57,1.14,0.01,">1 nonsynonymous","C31E Y50S",2
"lib1","SARS-CoV-2","ACTTCAGTGGCGGAGA",8,68.73,10.4,-0.37,0.03,2.97,1.01,0,">1 nonsynonymous","P54T P149C",2
"lib1","SARS-CoV-2","ACTTCATATTTATTAG",8,49.5,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","V20H",1
"lib1","SARS-CoV-2","ACTTCATCACTAGCGC",2,0,NA,NA,NA,NA,NA,NA,"stop","A89* T201E",2
"lib1","SARS-CoV-2","ACTTCATCGATATAAT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","C31Y S41* W106* P197G",4
"lib1","SARS-CoV-2","ACTTCATCTATGAACT",3,50.4,10.22,-0.54,0.08,2.97,1,0,">1 nonsynonymous","D98L F156W",2
"lib1","SARS-CoV-2","ACTTCATTTTGGAGAG",2,11.02,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V103Q N109H",2
"lib1","SARS-CoV-2","ACTTCCAAAAGCGCCT",4,70.26,10.02,-0.75,0.1,2.39,1.03,0,">1 nonsynonymous","S36A P96T S147K K199M",4
"lib1","SARS-CoV-2","ACTTCCAACTGTCGAA",6,90.24,10.79,0.03,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTTCCAGTTTTTTCG",7,46.31,10.79,0.03,0.06,2.92,1.02,0,">1 nonsynonymous","E141T K199Y",2
"lib1","SARS-CoV-2","ACTTCCATAACCATAT",5,2.12,NA,NA,NA,NA,NA,NA,"stop","R16V A22T Y39T V52S D59* F99S R124T T148I N157C Q168S",10
"lib1","SARS-CoV-2","ACTTCCCAATTCTAGC",8,55.79,6,-4.76,0.81,1.5,1.15,0.01,">1 nonsynonymous","W23N Y50N S147T",3
"lib1","SARS-CoV-2","ACTTCCCACTTACCCT",3,0.36,NA,NA,NA,NA,NA,NA,"stop","N4K F44N G146* N151G T201C",5
"lib1","SARS-CoV-2","ACTTCCCAGCTGCCAA",3,76.02,6.05,-4.72,1.24,1.5,1.24,0.03,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","ACTTCCCCCCTCAAAC",5,59.67,10.06,-0.7,0.14,2.4,1.03,0.01,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","ACTTCCCCGGATTTTC",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H G174S",2
"lib1","SARS-CoV-2","ACTTCCCGGCCGAACG",5,539.3,10.26,-0.5,0.03,2.95,1,0,"1 nonsynonymous","P169H",1
"lib1","SARS-CoV-2","ACTTCCCTAGAGCATA",5,88.28,9.85,-0.91,0.1,2.3,1.08,0,">1 nonsynonymous","N24F C61M",2
"lib1","SARS-CoV-2","ACTTCCGGAGATAGTT",4,87.29,10.16,-0.6,0.08,2.52,1.06,0,">1 nonsynonymous","I2P G9L T15M",3
"lib1","SARS-CoV-2","ACTTCCTAAGGCGAAT",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96V S139H",2
"lib1","SARS-CoV-2","ACTTCCTATTAACGGT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","S45Y Y50N V77* I88E N130L T148I",6
"lib1","SARS-CoV-2","ACTTCCTCCGCTCGCT",7,38.66,6.28,-4.49,0.79,1.5,1.23,0.04,">1 nonsynonymous","R25I N40L N107F K114R G196K",5
"lib1","SARS-CoV-2","ACTTCCTCCTAGAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","T85N R124A E154*",3
"lib1","SARS-CoV-2","ACTTCCTTTCATAACC",2,65.46,10.13,-0.63,0.05,2.76,1,0,">1 nonsynonymous","T46F K128W",2
"lib1","SARS-CoV-2","ACTTCCTTTCTGATTC",6,10.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F99D N171A",2
"lib1","SARS-CoV-2","ACTTCGAAAAGCCAGC",7,3.56,NA,NA,NA,NA,NA,NA,"stop","N1K V77L F99P N120G F126* N151H Q176L",7
"lib1","SARS-CoV-2","ACTTCGAATATTAAGT",5,38.27,10.71,-0.05,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTCGACCCGCAGCA",4,96.28,10.61,-0.16,0.03,2.88,1.07,0,">1 nonsynonymous","N30E T201V",2
"lib1","SARS-CoV-2","ACTTCGACTAAGTCCC",5,49.65,9.54,-1.22,0.13,1.82,1.13,0.01,">1 nonsynonymous","V20L V173L",2
"lib1","SARS-CoV-2","ACTTCGATATAAAGCT",10,67.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86E L162H",2
"lib1","SARS-CoV-2","ACTTCGATCCTTCAAT",6,51.17,9.94,-0.83,0.13,2.37,1.06,0.01,"1 nonsynonymous","S139W",1
"lib1","SARS-CoV-2","ACTTCGCCCAGTCAAT",4,60.61,8.86,-1.91,0.06,2.82,1.1,0,">1 nonsynonymous","T100R Y119C I138L",3
"lib1","SARS-CoV-2","ACTTCGCGCCCCACAG",9,0.46,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","ACTTCGGGCAAGTGGA",4,28.33,10.65,-0.12,0.06,2.92,1.07,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","ACTTCGGGCAATTTGT",1,48.37,10.63,-0.13,0.1,2.85,1.11,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","ACTTCGTAAATACTTC",7,118.35,10.11,-0.65,0.04,2.89,1.01,0,">1 nonsynonymous","C6H Y35I T85A",3
"lib1","SARS-CoV-2","ACTTCGTACCTGCGTA",2,11.61,6,-4.76,2,2.89,1.12,0.01,">1 nonsynonymous","V20A Y50T P96I",3
"lib1","SARS-CoV-2","ACTTCGTCAAACTTAG",2,30.21,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G86V F126I C150I P177G",4
"lib1","SARS-CoV-2","ACTTCGTCATTGTTTC",1,8.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15E V32H Y66P W106S E135I T170V",6
"lib1","SARS-CoV-2","ACTTCTAACTAATAAT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96D Y165A",2
"lib1","SARS-CoV-2","ACTTCTAGAAGTTTAC",2,6.51,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N92Y F99V N110C P149F L162R",5
"lib1","SARS-CoV-2","ACTTCTATCTATCCCA",3,36.78,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F99H G117W G155W Q176L",4
"lib1","SARS-CoV-2","ACTTCTATGCCGAAAG",4,43.07,10.85,0.09,0.06,2.89,1.04,0,">1 nonsynonymous","V37G R78S",2
"lib1","SARS-CoV-2","ACTTCTATTTATAATT",3,1.01,NA,NA,NA,NA,NA,NA,"stop","S19* S41A Y66F N110L R127V P149K",6
"lib1","SARS-CoV-2","ACTTCTCAGGATTCAA",16,4.2,NA,NA,NA,NA,NA,NA,"stop","S41W D75E Y175*",3
"lib1","SARS-CoV-2","ACTTCTCCAAGAATTT",1,58.29,10.08,-0.68,0.07,2.82,1.06,0,">1 nonsynonymous","T15K F156S",2
"lib1","SARS-CoV-2","ACTTCTCTATTTTCCT",1,14.23,10.66,-0.1,0.13,2.83,1.14,0.01,">1 nonsynonymous","G9N Y39L",2
"lib1","SARS-CoV-2","ACTTCTCTCTAACTAC",2,13.82,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","D90H N120E C150T",3
"lib1","SARS-CoV-2","ACTTCTGATATGTACA",2,34.16,6.51,-4.25,0.53,1.5,1.09,0.03,">1 nonsynonymous","C31E T100Y N107D",3
"lib1","SARS-CoV-2","ACTTCTGATGAAACAT",2,39.34,10.78,0.02,0.11,2.86,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ACTTCTGCACACGTGC",4,16.02,6.15,-4.62,0.63,2.73,1.27,0.01,">1 nonsynonymous","A33S N64A F70Q C158R",4
"lib1","SARS-CoV-2","ACTTCTGTCGAATACT",3,25.68,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A81E D90F D98Y N109Y",4
"lib1","SARS-CoV-2","ACTTCTTAATAACAAT",3,57.63,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G9L R16L F99D D137R",4
"lib1","SARS-CoV-2","ACTTCTTTAGTGCGCA",2,35.49,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D90C F126L Y165E",3
"lib1","SARS-CoV-2","ACTTCTTTCCACCAGC",6,148.33,10.11,-0.66,0.06,2.75,1.05,0,">1 nonsynonymous","S43G N107S",2
"lib1","SARS-CoV-2","ACTTGAAAAAACAGCA",10,72.13,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35N V52S Y121S K132V",4
"lib1","SARS-CoV-2","ACTTGAAAAACGTGTC",3,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T F99Y G155Y C195T",4
"lib1","SARS-CoV-2","ACTTGAAAAAGTATTG",7,61.74,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6I Y93W Y121G",3
"lib1","SARS-CoV-2","ACTTGAAAAGTGTTAA",2,27.03,10.37,-0.39,0.07,2.92,1,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","ACTTGAAAGATATAGC",3,20.99,10.22,-0.54,0.13,2.38,1.07,0.01,">1 nonsynonymous","F12V F44R",2
"lib1","SARS-CoV-2","ACTTGAAATTTAGGCT",9,142.75,10.04,-0.72,0.08,2.16,1.05,0,">1 nonsynonymous","N30W D98W",2
"lib1","SARS-CoV-2","ACTTGAACACACTGGT",1,0.52,NA,NA,NA,NA,NA,NA,"stop","C6S C61*",2
"lib1","SARS-CoV-2","ACTTGAACTACTTGAG",4,33.88,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A14S C61H V65T T100V A105S L122F K128F F167L",8
"lib1","SARS-CoV-2","ACTTGAACTAGGTTGA",9,22.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13Y V37R F99A Q163K K198Q",5
"lib1","SARS-CoV-2","ACTTGAACTGCACTGT",11,295.62,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","Y159T",1
"lib1","SARS-CoV-2","ACTTGAAGAGTAATCT",1,22.7,6,-4.76,1.59,1.5,1.13,0.01,">1 nonsynonymous","A14V N64I F99D",3
"lib1","SARS-CoV-2","ACTTGAAGGACTGTTA",3,85.28,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G83I F167L Y178T",3
"lib1","SARS-CoV-2","ACTTGAAGGCTGTACA",4,139.52,9.99,-0.77,0.07,2.47,1.05,0,">1 nonsynonymous","N1C V52L Q84E K128V",4
"lib1","SARS-CoV-2","ACTTGAAGTATTGGAA",1,42.68,10.72,-0.04,0.07,2.92,1.07,0,">1 nonsynonymous","L5H T55S",2
"lib1","SARS-CoV-2","ACTTGAATCAAACAAA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","I2L F12G C31* S45R C158S",5
"lib1","SARS-CoV-2","ACTTGACACAGAGAGT",8,74.29,6.18,-4.59,0.74,1.5,1.19,0.02,">1 nonsynonymous","S36R L95W P133L",3
"lib1","SARS-CoV-2","ACTTGACATTTTTAAA",1,17.75,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K56H T85L S129G L131R V181M T201S",6
"lib1","SARS-CoV-2","ACTTGACGACCAGAAT",1,14.9,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A18T T55F S113R S139V L162D",5
"lib1","SARS-CoV-2","ACTTGAGCATCTTTAG",1,12.29,10.58,-0.18,0.08,2.94,1.02,0,"1 nonsynonymous","A18K",1
"lib1","SARS-CoV-2","ACTTGAGGCAATGCTA",1,20.79,6.77,-4,0.19,1.5,1.12,0.01,">1 nonsynonymous","I104W C158T",2
"lib1","SARS-CoV-2","ACTTGAGGCGTTGGAT",3,81.25,10.65,-0.12,0.07,2.85,1.08,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","ACTTGAGTAAGAACAG",2,13.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98V G101A T201A",3
"lib1","SARS-CoV-2","ACTTGAGTGGTTTAAT",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q K87A A105I K128C Y143S",5
"lib1","SARS-CoV-2","ACTTGATCAATTGCAA",4,97.58,7.35,-3.41,0.22,1.5,1.18,0.02,">1 nonsynonymous","F12A S36L F62S T201W",4
"lib1","SARS-CoV-2","ACTTGATCAGTATCCC",2,6.6,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15R Q84T Y93C",3
"lib1","SARS-CoV-2","ACTTGATCTAATGAAA",3,11.37,6.35,-4.41,0.48,1.5,1.07,0.01,">1 nonsynonymous","W23R Q163P",2
"lib1","SARS-CoV-2","ACTTGATGCTGTGCCT",3,98.99,8.19,-2.58,0.33,1.5,1,0.04,">1 nonsynonymous","F12G Y35V W106T P197S",4
"lib1","SARS-CoV-2","ACTTGATTCCGAGCGC",1,17.93,7.32,-3.45,0.38,1.5,1,0.05,">1 nonsynonymous","N1I P82A G86L P96N",4
"lib1","SARS-CoV-2","ACTTGATTTACACTGA",2,5.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14L D90R Y119A P169N",4
"lib1","SARS-CoV-2","ACTTGCAAAAATGGTC",6,35,9.97,-0.8,0.11,2.29,1.09,0,">1 nonsynonymous","A33I N40K K128P N151V S164C",5
"lib1","SARS-CoV-2","ACTTGCAAGAAATCAA",2,114.04,10.61,-0.16,0.04,2.9,1.05,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","ACTTGCACAGCCATAA",2,2.15,NA,NA,NA,NA,NA,NA,"stop","L5C T46V Y121K C195G K198*",5
"lib1","SARS-CoV-2","ACTTGCACGATATGAC",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D G101S R136V P197Q",4
"lib1","SARS-CoV-2","ACTTGCATCATAAGTA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","G155D L162*",2
"lib1","SARS-CoV-2","ACTTGCATCTTGATGA",1,27.03,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I80F Y91S I104F N120L",4
"lib1","SARS-CoV-2","ACTTGCCACAAAGCAA",2,17.83,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D59E D68F D90K E135C C158P Y165N",6
"lib1","SARS-CoV-2","ACTTGCCAGGTACGTA",11,2.92,NA,NA,NA,NA,NA,NA,"stop","K87S F99V S113N Y119* N130S E154*",6
"lib1","SARS-CoV-2","ACTTGCCAGTCTACGA",1,30.28,10.59,-0.17,0.08,2.86,1,0,">1 nonsynonymous","A14T N120E",2
"lib1","SARS-CoV-2","ACTTGCCCAATTGTGC",3,14,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G83C G86T",2
"lib1","SARS-CoV-2","ACTTGCGAACTCAGAT",7,158.75,10.7,-0.06,0.06,2.81,1.07,0,">1 nonsynonymous","A33W T85I",2
"lib1","SARS-CoV-2","ACTTGCGACATCTTAT",1,12.81,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F8Y L38R Y121D",3
"lib1","SARS-CoV-2","ACTTGCGCGAAGAAGC",1,5.2,7.04,-3.73,0.5,2.02,1.21,0.02,">1 nonsynonymous","A89V D97N C102Q Y123G S139F",5
"lib1","SARS-CoV-2","ACTTGCGGGAGTTGAG",15,255.61,10.7,-0.06,0.07,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTGCTACGATCTTA",4,165.96,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V65G P82L R136A Q176V",4
"lib1","SARS-CoV-2","ACTTGCTGACCACTTA",4,117.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59E R127P Q168A Y175Q",4
"lib1","SARS-CoV-2","ACTTGCTGAGAGGGCG",1,38.82,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","L57K A81V Y93A A105L",4
"lib1","SARS-CoV-2","ACTTGGAAAAAACCAT",4,40.16,7.55,-3.22,0.24,1.5,1.09,0.03,">1 nonsynonymous","R127T F156S",2
"lib1","SARS-CoV-2","ACTTGGAATACATAGA",4,66.97,10.78,0.02,0.04,2.99,1,0,"1 nonsynonymous","K56H",1
"lib1","SARS-CoV-2","ACTTGGAGACTTAAAC",9,86.57,6.42,-4.35,0.63,1.5,1.19,0.03,">1 nonsynonymous","C150F G155L",2
"lib1","SARS-CoV-2","ACTTGGAGTCTACCTC",11,170.66,9.67,-1.1,0.06,2.35,1.09,0,">1 nonsynonymous","P7T G155V",2
"lib1","SARS-CoV-2","ACTTGGCCATAATTGC",2,57.84,10.66,-0.11,0.05,2.92,1.08,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","ACTTGGCGATGTAACT",1,3.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ACTTGGCGGAGTATCA",7,7.53,NA,NA,NA,NA,NA,NA,"stop","K48R D59* F134N G152P L188Y",5
"lib1","SARS-CoV-2","ACTTGGCTACATTTAC",3,7.42,NA,NA,NA,NA,NA,NA,"stop","N13F K94*",2
"lib1","SARS-CoV-2","ACTTGGGCGAAAAGTC",5,42.17,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y35N A42C D97L Y178D",4
"lib1","SARS-CoV-2","ACTTGGGTAAAAATGA",6,123.24,10.66,-0.1,0.05,2.9,1.04,0,">1 nonsynonymous","S43R I104M V153C S200M",4
"lib1","SARS-CoV-2","ACTTGGGTCGAACCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83I D97* T170S",3
"lib1","SARS-CoV-2","ACTTGGTGAATTAACA",2,105.8,10.21,-0.55,0.06,2.1,1.02,0,">1 nonsynonymous","T3Q E135L",2
"lib1","SARS-CoV-2","ACTTGGTGACAGAAAA",6,46.99,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D59T E76V D97S L131C C158R",5
"lib1","SARS-CoV-2","ACTTGGTGGGTTAAAC",1,21.68,8.19,-2.57,0.2,2.12,1.15,0.03,">1 nonsynonymous","T55S G146L",2
"lib1","SARS-CoV-2","ACTTGTAAATCTATTT",4,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44W I104R D112M G152A C158N",5
"lib1","SARS-CoV-2","ACTTGTAAGAAAGTGA",4,1.16,NA,NA,NA,NA,NA,NA,"stop","N109A I142*",2
"lib1","SARS-CoV-2","ACTTGTACAAATATAT",1,61.47,10.82,0.05,0.04,2.91,1.01,0,">1 nonsynonymous","I2S A18S",2
"lib1","SARS-CoV-2","ACTTGTACAAGGCGAC",7,87.27,10.62,-0.14,0.11,2.81,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTGTACCACAGAAG",1,49.79,10.54,-0.22,0.03,2.93,1.04,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","ACTTGTACCGTAACCC",2,26.14,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A33W K87N C158I",3
"lib1","SARS-CoV-2","ACTTGTACTGTACCGT",1,4.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112Q",1
"lib1","SARS-CoV-2","ACTTGTATAACCTCGC",9,3.88,NA,NA,NA,NA,NA,NA,"stop","D68* N118D R136H",3
"lib1","SARS-CoV-2","ACTTGTCACAAAATAA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","I104N I142*",2
"lib1","SARS-CoV-2","ACTTGTCACCGATGAA",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L Y35R P82L A105T R136W P149I G155N C195R",8
"lib1","SARS-CoV-2","ACTTGTCATCCAGAAT",4,16.91,8.11,-2.66,0.12,2.62,1.08,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","ACTTGTCCAAATGGCG",7,46.53,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S69I K94N D137L C158H",4
"lib1","SARS-CoV-2","ACTTGTCCTAGCTCGT",8,63.23,10.79,0.03,0.07,2.84,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ACTTGTCGCAGAGATA",1,36.1,10.66,-0.1,0.07,2.92,1,0,"1 nonsynonymous","L57M",1
"lib1","SARS-CoV-2","ACTTGTCTACGCATCC",2,14.28,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12L G117R L131P",3
"lib1","SARS-CoV-2","ACTTGTCTTCTTGGAC",6,17.44,10.15,-0.62,0.12,2.55,1,0.01,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","ACTTGTGAAAGGAACC",2,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T C102E Q168L",3
"lib1","SARS-CoV-2","ACTTGTTAAAGAGACA",11,89.71,8.05,-2.71,0.16,1.82,1.09,0.01,"1 nonsynonymous","R179V",1
"lib1","SARS-CoV-2","ACTTGTTAATACAGCT",10,147.04,10.78,0.02,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTGTTACCCTGGGA",3,88.52,6.08,-4.68,0.51,1.5,1.1,0.01,">1 nonsynonymous","N13R S19F F44T D112T",4
"lib1","SARS-CoV-2","ACTTGTTAGTTTCAAA",4,20.17,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","F12C T55K D90L G174T T201W",5
"lib1","SARS-CoV-2","ACTTGTTATAGAATAT",2,18.22,10.85,0.09,0.08,2.95,1,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","ACTTGTTTAAATTCTT",3,15,10,-0.76,0.17,2.61,1.01,0.01,">1 nonsynonymous","S45V K128E",2
"lib1","SARS-CoV-2","ACTTGTTTAATAACGA",2,27.57,8.55,-2.22,0.31,1.68,1.13,0.04,">1 nonsynonymous","F8S N107P K114R",3
"lib1","SARS-CoV-2","ACTTGTTTTCTACTCC",1,45.95,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L60D L122M N151E F167A Q176L",5
"lib1","SARS-CoV-2","ACTTTAAAAAAAACAA",7,82.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16I T55W Y143Q Q168L G174L",5
"lib1","SARS-CoV-2","ACTTTAAAAATCACGA",5,27,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S19L G51W N64I",3
"lib1","SARS-CoV-2","ACTTTAAAATGCCTAG",7,154.26,10.81,0.04,0.07,2.89,1.04,0,">1 nonsynonymous","T55D N64S V194I",3
"lib1","SARS-CoV-2","ACTTTAAACCATTAAC",2,40.89,10.1,-0.66,0.11,2.05,1,0.01,">1 nonsynonymous","A14N W106T",2
"lib1","SARS-CoV-2","ACTTTAAACTCTACAG",5,60.43,6.16,-4.6,1.32,1.5,1.27,0.06,">1 nonsynonymous","F70S S108L G146K",3
"lib1","SARS-CoV-2","ACTTTAAAGCATAGTA",3,28.32,8.8,-1.96,0.18,2.1,1.08,0.01,">1 nonsynonymous","Y121K S129L F156L",3
"lib1","SARS-CoV-2","ACTTTAAATATCAAGC",5,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y G116L",2
"lib1","SARS-CoV-2","ACTTTAAATCACACAT",2,14.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K G51A G146L",3
"lib1","SARS-CoV-2","ACTTTAACAACAACCA",4,5.51,6,-4.76,1.07,3,1.08,0.01,">1 nonsynonymous","L57P Y123G G155R K199M",4
"lib1","SARS-CoV-2","ACTTTAACCATAAGAA",6,121.44,9.63,-1.14,0.3,1.5,1,0.04,">1 nonsynonymous","G9Q S29K K87M P177L F185T",5
"lib1","SARS-CoV-2","ACTTTAAGAAGGATGT",2,36.27,6,-4.76,2,2.19,1.25,0.01,">1 nonsynonymous","P96S N107V A145I",3
"lib1","SARS-CoV-2","ACTTTAAGTATTTATA",6,52.67,9.43,-1.33,0.14,1.64,1.08,0.01,">1 nonsynonymous","G9V S19G V37M A105S",4
"lib1","SARS-CoV-2","ACTTTAAGTCTATGGT",2,49.66,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y121T I142S",2
"lib1","SARS-CoV-2","ACTTTAAGTGGAGATA",13,2468.32,7.79,-2.97,0.18,1.5,1.09,0.01,"1 nonsynonymous","G172C",1
"lib1","SARS-CoV-2","ACTTTAATAGCAAAAA",1,17.34,8.48,-2.29,0.38,1.58,1.19,0.07,">1 nonsynonymous","N107F L122R",2
"lib1","SARS-CoV-2","ACTTTAATGTCGTTTT",5,48.61,10.79,0.02,0.09,2.83,1.12,0,">1 nonsynonymous","T15S L188S",2
"lib1","SARS-CoV-2","ACTTTAATTAGGCCGC",2,22.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60R K87G F167I",3
"lib1","SARS-CoV-2","ACTTTACAATCACTAA",1,4.29,NA,NA,NA,NA,NA,NA,"stop","F8* Y66T L122A",3
"lib1","SARS-CoV-2","ACTTTACAGCTTCTTT",2,0.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56H",1
"lib1","SARS-CoV-2","ACTTTACCATGATTGT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","I28A V115* L122H",3
"lib1","SARS-CoV-2","ACTTTACGAAAAATAC",6,135.13,10.75,-0.02,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTTACGCACAGACT",3,22.75,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I80C Y121N G172V",3
"lib1","SARS-CoV-2","ACTTTACGCGCTCAAG",1,24.76,10.22,-0.54,0.15,2.47,1.03,0.01,">1 nonsynonymous","D34S N171C",2
"lib1","SARS-CoV-2","ACTTTACTACTCTTAG",1,19.85,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N24V K48G Y91D D97I",4
"lib1","SARS-CoV-2","ACTTTACTACTTTCGT",3,7.86,6,-4.76,2,3,1.25,0.06,">1 nonsynonymous","N1K C49Y D97R W106L N120I L162P",6
"lib1","SARS-CoV-2","ACTTTACTATTTTTCG",1,38.3,8.39,-2.38,0.09,2.88,1.02,0.01,">1 nonsynonymous","N110I I138D G166F",3
"lib1","SARS-CoV-2","ACTTTACTCCACGCTA",2,9.52,10.65,-0.11,0.13,2.8,1.08,0.01,">1 nonsynonymous","S41N N130Y T140K",3
"lib1","SARS-CoV-2","ACTTTACTCGCTTTGA",2,17.62,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Y50L D90G Y121R P149L",4
"lib1","SARS-CoV-2","ACTTTAGAAGCAGAGT",3,36.76,9.08,-1.68,0.07,2.64,1.09,0,">1 nonsynonymous","G146Q F160M",2
"lib1","SARS-CoV-2","ACTTTAGGAGAAACGA",10,1.49,NA,NA,NA,NA,NA,NA,"stop","S29G Y35* V103R",3
"lib1","SARS-CoV-2","ACTTTAGTTTAGTAAC",1,3.6,NA,NA,NA,NA,NA,NA,"stop","F8I K56* I88D N120G G152*",5
"lib1","SARS-CoV-2","ACTTTAGTTTTGCGAG",12,212.21,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9T S129I C150M",3
"lib1","SARS-CoV-2","ACTTTATAAAAAGAGT",8,49.06,8.45,-2.31,0.18,1.69,1.09,0.01,"1 nonsynonymous","G74V",1
"lib1","SARS-CoV-2","ACTTTATAATGTAGTT",2,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129L R136H S164Y",3
"lib1","SARS-CoV-2","ACTTTATTAATGAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105I L122V A145C R179F A190E",5
"lib1","SARS-CoV-2","ACTTTATTCTAATCCT",4,1.47,NA,NA,NA,NA,NA,NA,"stop","A14K L131*",2
"lib1","SARS-CoV-2","ACTTTCAAAAAATGAT",10,182.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36G V52Y G86V G101W Y119H F167D",6
"lib1","SARS-CoV-2","ACTTTCAAACGATGGG",2,24.07,10.82,0.06,0.05,2.91,1.07,0,"1 nonsynonymous","T140M",1
"lib1","SARS-CoV-2","ACTTTCAACCGTTAAG",1,46.27,8.85,-1.92,0.25,1.5,1.12,0.02,">1 nonsynonymous","V103A S200L",2
"lib1","SARS-CoV-2","ACTTTCACAATTTCAA",1,51.1,10.59,-0.17,0.04,2.97,1.04,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","ACTTTCACAGAACTAA",1,79.63,10.38,-0.39,0.04,2.89,1.03,0,">1 nonsynonymous","E10L P149T",2
"lib1","SARS-CoV-2","ACTTTCAGACATACCA",1,57.04,10.14,-0.63,0.05,2.66,1,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","ACTTTCAGATAAAGTT",1,19.87,10.26,-0.51,0.07,2.83,1.07,0,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","ACTTTCAGTTTCAGCA",6,25.88,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","T15R A89L",2
"lib1","SARS-CoV-2","ACTTTCCAATTGGTTG",4,28.31,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","Y119S I142N Y165P",3
"lib1","SARS-CoV-2","ACTTTCCCAAATACGG",1,37.09,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8W P54Q N107K Y123T T170S",5
"lib1","SARS-CoV-2","ACTTTCCTTTATTCAC",5,8.92,NA,NA,NA,NA,NA,NA,"stop","N107* Y143V F167I T201M",4
"lib1","SARS-CoV-2","ACTTTCGGGTGATAGA",8,31.74,6.75,-4.01,0.33,1.5,1.11,0.02,">1 nonsynonymous","W23R G152S",2
"lib1","SARS-CoV-2","ACTTTCGTAAAGCACT",1,108.28,10.09,-0.67,0.07,2.76,1.02,0,">1 nonsynonymous","N1I T3M F156R",3
"lib1","SARS-CoV-2","ACTTTCGTACACGCCG",4,23.3,10.22,-0.55,0.13,2.72,1.06,0.01,">1 nonsynonymous","P7R N13R",2
"lib1","SARS-CoV-2","ACTTTCTAAAAAAGAA",3,34.97,9.87,-0.89,0.06,2.65,1.08,0,">1 nonsynonymous","G9L C31K K56S",3
"lib1","SARS-CoV-2","ACTTTCTAACACTACT",5,54.22,10.77,0.01,0.07,2.97,1.02,0,">1 nonsynonymous","T148S A190K",2
"lib1","SARS-CoV-2","ACTTTCTAATCGATTT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I G172D",2
"lib1","SARS-CoV-2","ACTTTCTCCTTAAAGG",6,112.86,10.83,0.06,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ACTTTCTGTAATTGTA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","Y39E D98*",2
"lib1","SARS-CoV-2","ACTTTCTGTTAATTCT",1,14.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1V T85L I88S T201D",4
"lib1","SARS-CoV-2","ACTTTCTTAGCAACTA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","I2W L38T Q79* E141R S200C",5
"lib1","SARS-CoV-2","ACTTTGAAATTGTTGT",1,8.4,6,-4.76,0.84,1.6,1.05,0,">1 nonsynonymous","A33R N120K K128H G172T",4
"lib1","SARS-CoV-2","ACTTTGAACCCCGATT",4,45.57,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S69R N107Y L122D K128L N157R",5
"lib1","SARS-CoV-2","ACTTTGAACGCTAAAA",6,76.34,9.9,-0.86,0.12,1.98,1.06,0.01,">1 nonsynonymous","D90G S184R",2
"lib1","SARS-CoV-2","ACTTTGAACTTTAACC",9,25.85,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K26P D90L E135L T193Y V194G",5
"lib1","SARS-CoV-2","ACTTTGAAGACATAAC",1,25.91,10.21,-0.56,0.14,2.45,1.01,0.01,">1 nonsynonymous","D98L E135A",2
"lib1","SARS-CoV-2","ACTTTGAAGTCTAGGT",5,76.95,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V103R K199N",2
"lib1","SARS-CoV-2","ACTTTGACCACACGCT",6,25.36,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G51V T148Q V180S",3
"lib1","SARS-CoV-2","ACTTTGATAACACTCG",6,106.15,10.76,0,0.06,2.9,1.03,0,"1 nonsynonymous","L38I",1
"lib1","SARS-CoV-2","ACTTTGATACCTTCTA",3,8.72,6.92,-3.84,0.57,1.5,1.18,0.08,"1 nonsynonymous","D137P",1
"lib1","SARS-CoV-2","ACTTTGATATAAAAAC",3,21.77,6,-4.76,2,3,1.16,0,">1 nonsynonymous","T15N T55A S129L C158L T201M",5
"lib1","SARS-CoV-2","ACTTTGATATATAAAG",1,10.97,7.5,-3.27,0.27,1.5,1.01,0.02,">1 nonsynonymous","F44I I80V C158R",3
"lib1","SARS-CoV-2","ACTTTGCGACAACATG",5,51.57,10.68,-0.09,0.06,2.91,1.09,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","ACTTTGGAAAGCAAAC",6,78.42,9.49,-1.27,0.1,2.34,1.11,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","ACTTTGGACATGCGGC",3,80.24,10.16,-0.6,0.05,2.95,1,0,">1 nonsynonymous","V115S E154D",2
"lib1","SARS-CoV-2","ACTTTGGACCTCGGGC",1,17.24,10.5,-0.26,0.11,2.73,1.13,0,"1 nonsynonymous","D34C",1
"lib1","SARS-CoV-2","ACTTTGGACTCAGGCC",8,5.79,NA,NA,NA,NA,NA,NA,"stop","V77G G86C R136C Q168*",4
"lib1","SARS-CoV-2","ACTTTGGATAGATAAG",7,130.75,9.95,-0.82,0.1,2.26,1.03,0,"1 nonsynonymous","R127N",1
"lib1","SARS-CoV-2","ACTTTGGGATAAAATA",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V F99Y",2
"lib1","SARS-CoV-2","ACTTTGGGGAAGCGCC",4,50.83,9.26,-1.51,0.15,1.95,1.12,0.01,">1 nonsynonymous","L5E N40T P54L L122N G152S N171S E186K",7
"lib1","SARS-CoV-2","ACTTTGTACTACGCTT",1,33.87,7.12,-3.64,0.3,1.5,1.08,0.02,">1 nonsynonymous","R25T N118I",2
"lib1","SARS-CoV-2","ACTTTGTGCCCAACAT",2,33.47,10.78,0.01,0.1,2.92,1.05,0,">1 nonsynonymous","N151L P197I",2
"lib1","SARS-CoV-2","ACTTTTAAAAAATTCT",6,106,8.24,-2.52,0.22,1.54,1.14,0.02,">1 nonsynonymous","G83V V115A G174V",3
"lib1","SARS-CoV-2","ACTTTTAACGATAGAA",1,23.8,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","K48I K56N N64T Y123T E135S",5
"lib1","SARS-CoV-2","ACTTTTACAGTGTATG",2,31.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D75M N92T S129N",3
"lib1","SARS-CoV-2","ACTTTTACCACTTATA",5,100.37,10.56,-0.21,0.06,2.85,1.11,0,">1 nonsynonymous","E141Q T148A",2
"lib1","SARS-CoV-2","ACTTTTAGCATAATGA",1,22.41,6.39,-4.38,0.38,1.5,1.12,0.01,">1 nonsynonymous","C6T S29R G172N",3
"lib1","SARS-CoV-2","ACTTTTAGCATACTAG",3,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T S53G G83M V153E",4
"lib1","SARS-CoV-2","ACTTTTAGTCAGAATG",4,5.62,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S29G C61K D98V N107H K199C",5
"lib1","SARS-CoV-2","ACTTTTAGTGACGATT",13,227.18,10.75,-0.02,0.06,2.91,1.04,0,">1 nonsynonymous","E141D K199E",2
"lib1","SARS-CoV-2","ACTTTTATAACTAGAT",4,37.11,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C49I P177S",2
"lib1","SARS-CoV-2","ACTTTTATATCATGAG",10,1.39,NA,NA,NA,NA,NA,NA,"stop","F8E G101Q G116* Q176* K198R",5
"lib1","SARS-CoV-2","ACTTTTCAGGGTTATA",1,8.08,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F70K F99R I142N",3
"lib1","SARS-CoV-2","ACTTTTCCATTATTCT",3,92.17,10.34,-0.43,0.06,2.83,1.02,0,">1 nonsynonymous","T15P V182I",2
"lib1","SARS-CoV-2","ACTTTTCCTATCTCGA",2,53.01,10.09,-0.68,0.08,2.63,1.01,0,">1 nonsynonymous","I2E G51V",2
"lib1","SARS-CoV-2","ACTTTTCGAAAAGGCT",2,9.5,9.99,-0.78,0.1,2.89,1.06,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","ACTTTTCGCCTTTTCC",3,25.03,6,-4.76,1.38,1.5,1.12,0.04,">1 nonsynonymous","V103R K114E Y175A",3
"lib1","SARS-CoV-2","ACTTTTCTATCTTTTC",1,5.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ACTTTTGAACATATCC",3,137.82,10.62,-0.14,0.04,2.91,1.02,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","ACTTTTGGCCCCACAC",4,119.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27S C49N N58I K132R N151K V173S P177E T201R",8
"lib1","SARS-CoV-2","ACTTTTGTATGTTACA",4,39.55,8.21,-2.55,0.23,1.5,1.08,0.02,">1 nonsynonymous","S29N C49Y F156L",3
"lib1","SARS-CoV-2","ACTTTTTAAGATCAAA",2,37.36,6.22,-4.54,0.49,1.94,1.2,0.01,">1 nonsynonymous","D90I N107T T201L",3
"lib1","SARS-CoV-2","ACTTTTTCCCTGAATA",1,15.89,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","L38V D59G G86S N107G R127T",5
"lib1","SARS-CoV-2","ACTTTTTCCTACGATA",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R S43W R127I",3
"lib1","SARS-CoV-2","ACTTTTTCGGCTCGTA",11,103.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W D90T T148S G152S",4
"lib1","SARS-CoV-2","ACTTTTTGTAACTAAT",1,17.66,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S29L T46L P54T R78F D90I P197R",6
"lib1","SARS-CoV-2","ACTTTTTTACAATCCG",1,3.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","ACTTTTTTACTCTCCC",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y N58L G166V",3
"lib1","SARS-CoV-2","ACTTTTTTGCATCCCG",8,5.76,NA,NA,NA,NA,NA,NA,"stop","F44L G83S L122*",3
"lib1","SARS-CoV-2","ACTTTTTTTCTACAAA",2,49.44,6.28,-4.49,0.59,1.5,1.13,0.02,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","AGAAAAAAAATTTTTA",1,22.39,9.67,-1.1,0.07,2.97,1,0,"1 nonsynonymous","G117S",1
"lib1","SARS-CoV-2","AGAAAAAAACGAATAT",3,77.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28A V77R",2
"lib1","SARS-CoV-2","AGAAAAAAAGTACCAA",9,70.03,6.28,-4.48,0.68,1.5,1.21,0.02,">1 nonsynonymous","E10G T55R P96M V103H R136N",5
"lib1","SARS-CoV-2","AGAAAAAAATAAATTG",2,25.9,10.04,-0.73,0.1,2.36,1,0,">1 nonsynonymous","S43I F167Y H189I",3
"lib1","SARS-CoV-2","AGAAAAAAATGAATAT",3,44.79,10.33,-0.43,0.1,2.67,1.04,0,">1 nonsynonymous","L131V G152L",2
"lib1","SARS-CoV-2","AGAAAAAAATGACATG",1,71.17,10.07,-0.7,0.08,2.72,1.02,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","AGAAAAAAATGCACGA",1,18.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82M T85M F134T",3
"lib1","SARS-CoV-2","AGAAAAAACACCGTTG",6,2.07,NA,NA,NA,NA,NA,NA,"stop","E10R C49A A67R P82Y A89V V103N L188*",7
"lib1","SARS-CoV-2","AGAAAAAACCTATTTG",1,54.74,9.85,-0.91,0.08,2.23,1.03,0,">1 nonsynonymous","A14T D34A",2
"lib1","SARS-CoV-2","AGAAAAAAGAAATCAT",8,57.7,6.81,-3.96,0.26,1.5,1.24,0.01,">1 nonsynonymous","C6L V11L K26E Y93F",4
"lib1","SARS-CoV-2","AGAAAAAAGAGTTAAA",6,55.22,6.23,-4.53,0.57,1.5,1.18,0.02,">1 nonsynonymous","C61P D68E G152S",3
"lib1","SARS-CoV-2","AGAAAAAAGCGCCAAG",1,25.9,9.55,-1.22,0.2,1.5,1,0.02,">1 nonsynonymous","Y35L N64I G86A",3
"lib1","SARS-CoV-2","AGAAAAAAGGAATCCT",2,18.21,8.32,-2.44,0.47,1.5,1,0.07,">1 nonsynonymous","P82T R127L Q163R P169V",4
"lib1","SARS-CoV-2","AGAAAAAATAAGGATC",2,17.2,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L95N D98G V103W E154M",4
"lib1","SARS-CoV-2","AGAAAAAATCAGCAAA",6,39.89,6,-4.76,1.22,1.5,1.13,0.01,">1 nonsynonymous","Y50K L60T V65W A89L",4
"lib1","SARS-CoV-2","AGAAAAAATCTAAATA",9,74.38,6,-4.76,1.54,1.5,1.2,0.01,">1 nonsynonymous","D90E Y91V C102N",3
"lib1","SARS-CoV-2","AGAAAAACAAATTAAT",11,3.61,NA,NA,NA,NA,NA,NA,"stop","G9E C61* D98T N118L",4
"lib1","SARS-CoV-2","AGAAAAACAATAAATT",10,90.94,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","W23C Y35H P177T",3
"lib1","SARS-CoV-2","AGAAAAACCATGCCTA",1,58.76,8.58,-2.19,0.16,1.91,1.09,0.01,">1 nonsynonymous","T15N L57M G117T",3
"lib1","SARS-CoV-2","AGAAAAACGAAAATAG",1,36,8.48,-2.29,0.15,1.5,1.06,0.01,">1 nonsynonymous","C6I D97T R136L",3
"lib1","SARS-CoV-2","AGAAAAACGATGTAAA",2,16.18,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","AGAAAAAGACAATGCA",2,14.97,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60Q N118T R124Q",3
"lib1","SARS-CoV-2","AGAAAAAGAGTACACC",7,188.25,10.3,-0.46,0.03,2.88,1.03,0,">1 nonsynonymous","K56L Y123A",2
"lib1","SARS-CoV-2","AGAAAAAGCCGAAAAC",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W A105R Q144L",3
"lib1","SARS-CoV-2","AGAAAAAGCTAGGTAA",3,18.75,9.24,-1.53,0.27,1.62,1.22,0.04,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","AGAAAAAGGCGAAAAG",4,111.48,10.77,0,0.08,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAAAAAGTCTCTAAA",4,45.42,10.01,-0.75,0.09,2.38,1,0,">1 nonsynonymous","D34S P133S P197Q",3
"lib1","SARS-CoV-2","AGAAAAAGTGATTGCG",1,0.51,NA,NA,NA,NA,NA,NA,"stop","Y35V F70* A89E T100M Y121P P161E",6
"lib1","SARS-CoV-2","AGAAAAATAACTAACT",12,144.57,10.81,0.05,0.06,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAAAAATATAAGGAT",12,130.43,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4I N107S T140N N157K",4
"lib1","SARS-CoV-2","AGAAAAATCAACCTCC",3,7.23,NA,NA,NA,NA,NA,NA,"stop","W106* P177D",2
"lib1","SARS-CoV-2","AGAAAAATCAAGTATA",5,128.43,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","C31P P82L F134V",3
"lib1","SARS-CoV-2","AGAAAAATGTTAGACT",3,29.08,10.06,-0.71,0.18,2.79,1.18,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AGAAAAATTGGGGACC",3,51.93,10.72,-0.04,0.1,2.83,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAAAAATTTAACAAG",6,237.11,8.93,-1.84,0.06,2.62,1.09,0,">1 nonsynonymous","V37N K48N D97N N109T",4
"lib1","SARS-CoV-2","AGAAAACAACATGTCT",8,59.78,10.8,0.03,0.07,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAAACAAGCATTCC",3,22.63,10.53,-0.23,0.06,2.98,1,0,">1 nonsynonymous","V32G S43F",2
"lib1","SARS-CoV-2","AGAAAACAATTATCAG",1,45.94,10.54,-0.22,0.04,2.92,1.04,0,">1 nonsynonymous","K87N N130A",2
"lib1","SARS-CoV-2","AGAAAACACCAAATAA",3,49.56,6.9,-3.86,0.47,1.5,1.18,0.04,">1 nonsynonymous","S113V Y123S P149G V173R",4
"lib1","SARS-CoV-2","AGAAAACACCCAGGCC",5,0.06,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib1","SARS-CoV-2","AGAAAACACGATCGGC",11,1.24,NA,NA,NA,NA,NA,NA,"stop","I2L G9* S36Y S45F",4
"lib1","SARS-CoV-2","AGAAAACAGCAGGAGT",4,28.95,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86K L95S K132R",3
"lib1","SARS-CoV-2","AGAAAACAGGTTCACA",2,33.84,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I28V V77W K87T V180F",4
"lib1","SARS-CoV-2","AGAAAACCATTAATGG",3,23.16,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N1R S41C G146C G152K L183W",5
"lib1","SARS-CoV-2","AGAAAACCGAGATGGA",2,0.64,NA,NA,NA,NA,NA,NA,"stop","L5* P82* A105K R127D V153P",5
"lib1","SARS-CoV-2","AGAAAACCGCATAATA",5,169.09,10.19,-0.57,0.04,2.75,1.04,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","AGAAAACCTCTATGGT",1,0.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","AGAAAACCTGACAATC",6,119.15,6.01,-4.75,0.86,1.5,1.18,0.01,">1 nonsynonymous","N24L Y35I D90F N151K Q176M",5
"lib1","SARS-CoV-2","AGAAAACCTTATGAAC",1,23.62,6.11,-4.66,0.94,1.5,1.12,0.02,">1 nonsynonymous","G101V Y143W F156L",3
"lib1","SARS-CoV-2","AGAAAACCTTTAAACT",11,273.18,10.3,-0.47,0.04,2.81,1.02,0,"1 nonsynonymous","P133Y",1
"lib1","SARS-CoV-2","AGAAAACCTTTTACCT",7,69.01,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34K G51I G101W G146L T201M",5
"lib1","SARS-CoV-2","AGAAAACGATTACATA",5,0.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57D",1
"lib1","SARS-CoV-2","AGAAAACGATTGCCCT",4,0.22,NA,NA,NA,NA,NA,NA,"stop","T15H K26V K48* I138A C150E",5
"lib1","SARS-CoV-2","AGAAAACGCCTGATTG",4,59.14,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F17G N64G I72A R124V",4
"lib1","SARS-CoV-2","AGAAAACGCGAAAAAT",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93V S129T T140F F160K",4
"lib1","SARS-CoV-2","AGAAAACGGGAAAAGG",4,92.8,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","P82C D90N D98I Y178T",4
"lib1","SARS-CoV-2","AGAAAACGGTATTAAA",2,23.12,10.8,0.04,0.05,2.93,1.04,0,"1 nonsynonymous","R16V",1
"lib1","SARS-CoV-2","AGAAAACGTGACCCAA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","L60* F70R D98L G196W",4
"lib1","SARS-CoV-2","AGAAAACTAATGGGTT",1,31.28,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","V37S T100A D137N",3
"lib1","SARS-CoV-2","AGAAAACTACTACCTA",7,89.84,6,-4.76,2,2.72,1.13,0,">1 nonsynonymous","Y121V F185R",2
"lib1","SARS-CoV-2","AGAAAACTATAGATGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y143* F160S",2
"lib1","SARS-CoV-2","AGAAAACTATATCAGC",5,5.13,6.86,-3.91,0.92,3,1.29,0.03,">1 nonsynonymous","A42T C49Y C61Y F99K",4
"lib1","SARS-CoV-2","AGAAAACTCAAATTCT",12,96.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124S T201F",2
"lib1","SARS-CoV-2","AGAAAACTCAGAAAAG",8,129.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W G86K",2
"lib1","SARS-CoV-2","AGAAAACTCTAAATGG",7,5.21,NA,NA,NA,NA,NA,NA,"stop","S45V V103* N118C",3
"lib1","SARS-CoV-2","AGAAAACTTTGAAACG",3,11.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5R P82L K87S A105V K128F N151R",6
"lib1","SARS-CoV-2","AGAAAAGAGATCGCAG",4,109.71,9.56,-1.21,0.05,2.85,1.05,0,">1 nonsynonymous","C61I T170F T201A",3
"lib1","SARS-CoV-2","AGAAAAGAGGCTCTTC",8,134.47,8.5,-2.27,0.12,1.54,1.12,0.01,">1 nonsynonymous","C6V R136N",2
"lib1","SARS-CoV-2","AGAAAAGATAAGAATG",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P D98N G146E P197H",4
"lib1","SARS-CoV-2","AGAAAAGATATACCGT",1,5.5,10.07,-0.7,0.33,2.85,1,0.04,">1 nonsynonymous","S41V F62H K132I",3
"lib1","SARS-CoV-2","AGAAAAGATCTGATAG",4,10.64,9.06,-1.71,0.19,1.91,1.16,0.01,">1 nonsynonymous","A22D A42N D90N D112I",4
"lib1","SARS-CoV-2","AGAAAAGCAACGCTCA",2,13.76,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A33N C49A Q176K",3
"lib1","SARS-CoV-2","AGAAAAGCACGATAAG",6,46.02,10.55,-0.21,0.06,2.91,1.06,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","AGAAAAGCAGTCGCAA",5,0.5,NA,NA,NA,NA,NA,NA,"stop","L5S T15F G86* D98L K128P",5
"lib1","SARS-CoV-2","AGAAAAGCATCCATGA",12,1.89,NA,NA,NA,NA,NA,NA,"stop","K87P G146*",2
"lib1","SARS-CoV-2","AGAAAAGCCCGACTGT",3,13.39,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","V77G L131T I138M N157P",4
"lib1","SARS-CoV-2","AGAAAAGCCTGACAAA",2,0.6,NA,NA,NA,NA,NA,NA,"stop","S29W S45D E135*",3
"lib1","SARS-CoV-2","AGAAAAGCTATAGCTG",2,39.26,9.94,-0.82,0.12,2.15,1.11,0,">1 nonsynonymous","P133F N151P",2
"lib1","SARS-CoV-2","AGAAAAGGCCAGGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14Y S139*",2
"lib1","SARS-CoV-2","AGAAAAGTAAAACAAG",3,2.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22V",1
"lib1","SARS-CoV-2","AGAAAAGTTGGGGTCG",6,40.04,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S19L D90S V115H G155L",4
"lib1","SARS-CoV-2","AGAAAAGTTTCTGATT",6,1.1,NA,NA,NA,NA,NA,NA,"stop","R27G Y35N E76S P96A G117H P161*",6
"lib1","SARS-CoV-2","AGAAAATAAAAGAGAA",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46R V181S",2
"lib1","SARS-CoV-2","AGAAAATAACTATCGG",1,58.45,9.69,-1.07,0.14,2.3,1.08,0.01,">1 nonsynonymous","N120Q Q176R",2
"lib1","SARS-CoV-2","AGAAAATAACTTAGTT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","Y91* G101*",2
"lib1","SARS-CoV-2","AGAAAATAAGCTACGC",4,27.41,7.26,-3.5,0.31,1.6,1.18,0.03,">1 nonsynonymous","C31S D98N S113V",3
"lib1","SARS-CoV-2","AGAAAATAGAAAGAAG",3,43.94,9.99,-0.78,0.08,1.97,1.07,0,">1 nonsynonymous","F44S D98L",2
"lib1","SARS-CoV-2","AGAAAATAGTCAAATA",7,157.5,10.41,-0.36,0.05,2.92,1.01,0,">1 nonsynonymous","R27S Q84T Y123K G155T",4
"lib1","SARS-CoV-2","AGAAAATATAGATACA",5,93.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14Y T46E Y123W G155V Y175C",5
"lib1","SARS-CoV-2","AGAAAATATGTGTCAT",2,36.87,9.23,-1.53,0.06,2.84,1.11,0,">1 nonsynonymous","L5E C61V D90N Y119V",4
"lib1","SARS-CoV-2","AGAAAATCGAAAAAAC",2,10.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y66C D112H N120L Q168M",4
"lib1","SARS-CoV-2","AGAAAATCTATAAACC",1,5.13,6.57,-4.19,2,3,1.21,0.04,">1 nonsynonymous","R27Q L57K D97Y C158Q",4
"lib1","SARS-CoV-2","AGAAAATGAGAATAAA",6,53.25,6.08,-4.68,1.33,1.5,1.31,0.04,">1 nonsynonymous","N64I G86W L187N",3
"lib1","SARS-CoV-2","AGAAAATGGAATTTGT",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Q N92Y N107T C158L Y165G",5
"lib1","SARS-CoV-2","AGAAAATGTCAACGCA",5,51.41,9.37,-1.39,0.18,1.81,1.07,0.01,">1 nonsynonymous","G9V A22S V52Q",3
"lib1","SARS-CoV-2","AGAAAATGTCCTGGGG",4,28.56,6,-4.76,0.98,1.5,1.11,0.01,">1 nonsynonymous","F8H N58T Y143P A192G",4
"lib1","SARS-CoV-2","AGAAAATGTGTAGCGA",4,5.65,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","N13K Y35H C102I P133H",4
"lib1","SARS-CoV-2","AGAAAATTAGACAAAA",2,11.67,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","V37S Y93A T148I Y165K",4
"lib1","SARS-CoV-2","AGAAAATTATAGCGTG",6,3.4,NA,NA,NA,NA,NA,NA,"stop","N1* S19P C195F",3
"lib1","SARS-CoV-2","AGAAAATTCACCTAAG",3,46.34,10.36,-0.4,0.12,2.77,1.11,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AGAAAATTGAAGGTCT",5,83.79,10.6,-0.17,0.06,2.94,1.03,0,">1 nonsynonymous","N4L N24T",2
"lib1","SARS-CoV-2","AGAAAATTGGATTACT",1,5.54,8.7,-2.06,0.29,1.58,1.16,0.04,">1 nonsynonymous","T55G D75L D98V F156L",4
"lib1","SARS-CoV-2","AGAAAATTTAAAGTGT",3,16.54,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V11M D59Y W106R R127S",4
"lib1","SARS-CoV-2","AGAAAATTTGAAAAGC",1,35.27,10.33,-0.44,0.1,2.86,1.08,0,">1 nonsynonymous","G83L I104F N120Q I142H",4
"lib1","SARS-CoV-2","AGAAACAAAAAGACCC",4,17.45,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I104K F167L",2
"lib1","SARS-CoV-2","AGAAACAAAAGAAATG",5,79.18,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y21S T55M Q84E R136P E141C P161T G166V",7
"lib1","SARS-CoV-2","AGAAACAAAATTAAAT",2,21.31,6,-4.76,0.87,1.5,1.15,0.01,">1 nonsynonymous","G9T G101A",2
"lib1","SARS-CoV-2","AGAAACAAACAAATAT",3,32.82,10.28,-0.48,0.15,2.87,1.09,0.01,">1 nonsynonymous","P54Y Q84R",2
"lib1","SARS-CoV-2","AGAAACAAAGGGTACG",15,5.02,NA,NA,NA,NA,NA,NA,"stop","V103H F134*",2
"lib1","SARS-CoV-2","AGAAACAAATAAAGCG",6,49.97,9.46,-1.31,0.07,2.77,1.14,0,">1 nonsynonymous","D97H Y119A",2
"lib1","SARS-CoV-2","AGAAACAAGGACGTAT",3,10.75,6,-4.76,2,1.5,1.33,0.05,"1 nonsynonymous","D68L",1
"lib1","SARS-CoV-2","AGAAACAATAAATAGA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","F12* T63E",2
"lib1","SARS-CoV-2","AGAAACACGAATTCCA",4,11.49,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","R127V L131C N151F Y159T V173P",5
"lib1","SARS-CoV-2","AGAAACACTAAAAGTT",7,200.92,10.81,0.04,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACACTAACCAAA",3,17.39,10.09,-0.67,0.12,2.08,1,0.01,"1 nonsynonymous","C49M",1
"lib1","SARS-CoV-2","AGAAACACTAATACTA",1,24.54,9.67,-1.1,0.14,1.95,1.1,0.01,">1 nonsynonymous","Y50S V153A",2
"lib1","SARS-CoV-2","AGAAACACTCCACAAT",1,64.66,10.14,-0.62,0.06,2.85,1.02,0,">1 nonsynonymous","P7T Q144P",2
"lib1","SARS-CoV-2","AGAAACAGAGGTAGAA",3,95.76,9.83,-0.93,0.11,2.16,1.07,0,"1 nonsynonymous","I88T",1
"lib1","SARS-CoV-2","AGAAACAGATATCACG",4,7.29,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14M Y91K D98P E135A G155N",5
"lib1","SARS-CoV-2","AGAAACAGCAACTACA",4,19.59,10.28,-0.48,0.08,2.98,1,0,">1 nonsynonymous","G9R A33Q A192L",3
"lib1","SARS-CoV-2","AGAAACAGCTTCATAA",15,72.26,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C49S V173G",2
"lib1","SARS-CoV-2","AGAAACAGGTCTGTAA",2,1.57,NA,NA,NA,NA,NA,NA,"stop","A14C R25L L60* E141P V153K",5
"lib1","SARS-CoV-2","AGAAACAGTTTAACAA",11,37.04,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","G9W E76V P82R",3
"lib1","SARS-CoV-2","AGAAACATAAGTTGAT",16,8.12,NA,NA,NA,NA,NA,NA,"stop","T15* T46D D97R",3
"lib1","SARS-CoV-2","AGAAACATAGAAACGA",1,14.78,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F12D V37I D98L",3
"lib1","SARS-CoV-2","AGAAACATCACGTTGT",2,53.92,6.05,-4.71,0.49,1.5,1.11,0.01,">1 nonsynonymous","S41G K128P E135W F167G G196S",5
"lib1","SARS-CoV-2","AGAAACATCGTAGTAT",2,64.85,10.16,-0.61,0.04,2.91,1,0,">1 nonsynonymous","C6S K199I",2
"lib1","SARS-CoV-2","AGAAACATTCAGTCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37L G51* P96T G101Y E186F",5
"lib1","SARS-CoV-2","AGAAACATTGACGCAA",2,22.9,10.94,0.18,0.1,2.8,1.07,0,">1 nonsynonymous","K26M V32F L122R",3
"lib1","SARS-CoV-2","AGAAACCAACCCCAAG",1,42.87,10.59,-0.17,0.06,2.87,1.05,0,">1 nonsynonymous","V37S G116V T201D",3
"lib1","SARS-CoV-2","AGAAACCACGCCTGTT",25,232.92,10.42,-0.35,0.03,2.9,1.01,0,">1 nonsynonymous","N13L S43Y A190G",3
"lib1","SARS-CoV-2","AGAAACCACGTTATGC",4,36.8,7.89,-2.87,0.23,1.5,1.08,0.02,">1 nonsynonymous","A18G N118F E141W",3
"lib1","SARS-CoV-2","AGAAACCATAAGTATG",4,60.15,10.84,0.07,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACCATGCAAAAG",1,5.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17N G86D Y178C",3
"lib1","SARS-CoV-2","AGAAACCCACACTTAT",8,72.98,7.34,-3.42,0.27,1.5,1.11,0.02,">1 nonsynonymous","L5I V103Y P197L",3
"lib1","SARS-CoV-2","AGAAACCCACCTTGGG",5,38,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I88M N107S P133D P149L",4
"lib1","SARS-CoV-2","AGAAACCCCAACATCT",3,79.66,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S29K C49G Q176D",3
"lib1","SARS-CoV-2","AGAAACCCCGATAAGG",2,28.16,10.73,-0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACCCCTTGGTAG",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L Y50R L95T R136T",4
"lib1","SARS-CoV-2","AGAAACCCGTCCTATC",2,120.13,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S45V P161L P177T",3
"lib1","SARS-CoV-2","AGAAACCCGTTGCAAA",2,8.38,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14M S41H V77Q T100M S129R",5
"lib1","SARS-CoV-2","AGAAACCCTCTTAACA",3,22.83,10.61,-0.15,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACCTACTAGTCG",9,35.55,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V71E E141C",2
"lib1","SARS-CoV-2","AGAAACCTAGAGTACC",7,33.73,10.8,0.03,0.06,2.95,1.01,0,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","AGAAACCTCGGCGCGC",6,22.66,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C6S G9R G116C S139R",4
"lib1","SARS-CoV-2","AGAAACCTCTTATCTT",4,38.64,8.9,-1.86,0.16,1.53,1.13,0.01,">1 nonsynonymous","F47V T55L L60A Y178L",4
"lib1","SARS-CoV-2","AGAAACCTGGCCTGGC",4,12.95,7.3,-3.46,0.36,1.74,1.34,0.03,">1 nonsynonymous","F62M N157P",2
"lib1","SARS-CoV-2","AGAAACCTTACACCAA",2,12.43,10.58,-0.19,0.12,2.9,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACCTTACTTATA",5,42.99,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D34G S41V L60T P82Y D90Y R127S",6
"lib1","SARS-CoV-2","AGAAACCTTCGACGAT",6,122.01,10.36,-0.4,0.04,2.95,1.02,0,">1 nonsynonymous","G116S E186T",2
"lib1","SARS-CoV-2","AGAAACGAGAGATGGT",3,33.33,10.34,-0.42,0.06,2.91,1.01,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","AGAAACGAGTCACAGG",16,289.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F62E K87M F99P",3
"lib1","SARS-CoV-2","AGAAACGATCCACTAA",1,7.34,10.69,-0.07,0.13,2.97,1.03,0.01,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","AGAAACGATCTTAACG",7,103.44,8.32,-2.44,0.11,2.35,1.1,0,">1 nonsynonymous","W23F N120S N171D",3
"lib1","SARS-CoV-2","AGAAACGCAGGTCGAA",2,17.58,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","W23P L60I L95A F99L A145L L162S K199M",7
"lib1","SARS-CoV-2","AGAAACGCCTAAACAA",1,20.72,10.81,0.05,0.11,2.94,1,0,">1 nonsynonymous","K132F F156Y N171Y",3
"lib1","SARS-CoV-2","AGAAACGCCTAGCCCT",2,11.07,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5P D68E K87L D98Q",4
"lib1","SARS-CoV-2","AGAAACGGTATAAGCA",1,0.77,NA,NA,NA,NA,NA,NA,"stop","V77T P96* S139W G172*",4
"lib1","SARS-CoV-2","AGAAACGTAAGAGATG",2,50.53,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P54G N118V N151S F167P",4
"lib1","SARS-CoV-2","AGAAACGTAGCCTTCT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L I88F I104S",3
"lib1","SARS-CoV-2","AGAAACGTCGCACATA",1,12.43,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V77K I142H N151H F160L",4
"lib1","SARS-CoV-2","AGAAACTAACCATAGT",3,46.5,10.61,-0.15,0.19,2.81,1,0.01,">1 nonsynonymous","S36N K87T",2
"lib1","SARS-CoV-2","AGAAACTAAGAAAATG",3,134.06,10.78,0.02,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACTAAGATTGAT",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16G S41V F167Y",3
"lib1","SARS-CoV-2","AGAAACTACAACCCAA",1,5.51,9.32,-1.44,0.22,1.73,1.08,0.02,">1 nonsynonymous","R16S V71M E141V",3
"lib1","SARS-CoV-2","AGAAACTACGATTTTT",3,19.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L I88R N120S K132M E141G F185L",6
"lib1","SARS-CoV-2","AGAAACTATTTCAGAA",6,26.6,8.74,-2.02,0.11,2.95,1.07,0,"1 nonsynonymous","Y159L",1
"lib1","SARS-CoV-2","AGAAACTCAAACTCCT",13,114.53,9.37,-1.39,0.07,1.84,1.09,0,">1 nonsynonymous","W23S V77L V173E",3
"lib1","SARS-CoV-2","AGAAACTCAGTATATG",6,17.23,10.61,-0.15,0.06,2.9,1.04,0,">1 nonsynonymous","L60S D98N S139N",3
"lib1","SARS-CoV-2","AGAAACTCCCAATTCT",7,97.76,10.81,0.04,0.07,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACTCTACCATAA",6,35.34,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V20A Y50S F99Y L125E G146I E154F",6
"lib1","SARS-CoV-2","AGAAACTGCCTCACTA",3,37.27,10.84,0.08,0.09,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACTGGTAATGAT",5,58.81,10.73,-0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAACTTAACTTACA",2,5.53,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","A18G C31V T55H D68K G116I Q168S V173H",7
"lib1","SARS-CoV-2","AGAAACTTAGTATCGG",1,37.32,9.93,-0.83,0.06,2.86,1.04,0,">1 nonsynonymous","K26L V153P",2
"lib1","SARS-CoV-2","AGAAACTTATATGAAA",2,59.55,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V11T C49M N120S",3
"lib1","SARS-CoV-2","AGAAACTTCATTAACC",1,6.82,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","G86K E135T",2
"lib1","SARS-CoV-2","AGAAACTTCCCAAATC",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S G86N D98C S139T G174S Y178H",6
"lib1","SARS-CoV-2","AGAAACTTGCCTGTCA",2,15.21,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3W F99L R127I P149Y N157T N171V",6
"lib1","SARS-CoV-2","AGAAACTTTAAAGCCC",1,17.16,10.43,-0.33,0.09,2.93,1.03,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","AGAAACTTTCAAGGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","I104* S147* Y159R V173I",4
"lib1","SARS-CoV-2","AGAAACTTTTAATGCA",1,25.35,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F17S I72T N118V",3
"lib1","SARS-CoV-2","AGAAAGAAAAATTATT",4,65.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38F R127P Q168K",3
"lib1","SARS-CoV-2","AGAAAGAAAATAACCT",4,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59K Y66C",2
"lib1","SARS-CoV-2","AGAAAGAAACAATTCT",6,40.62,8.45,-2.32,0.2,1.92,1.19,0.01,">1 nonsynonymous","N13L G152V",2
"lib1","SARS-CoV-2","AGAAAGAAACAGTAGG",1,26.26,9.58,-1.18,0.14,2.61,1.08,0.01,">1 nonsynonymous","S36G L60M Y121S",3
"lib1","SARS-CoV-2","AGAAAGAACATGTCCC",1,29.29,6.11,-4.65,0.97,1.5,1.12,0.04,">1 nonsynonymous","F17T G86F D90E",3
"lib1","SARS-CoV-2","AGAAAGAAGTACGATG",8,104.08,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K26A D34L G86R D97H I138Y",5
"lib1","SARS-CoV-2","AGAAAGACCAACAATC",8,35.99,10.63,-0.14,0.06,2.91,1.01,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","AGAAAGACCTATAAGG",5,12.21,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","Y21I Y66L T100W E141M Y165F G174T",6
"lib1","SARS-CoV-2","AGAAAGACCTTGCCAG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D90G P96L I104L C150*",4
"lib1","SARS-CoV-2","AGAAAGAGAAACTCCA",6,84.72,10.76,-0.01,0.04,2.97,1,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","AGAAAGAGAAATTAAC",5,0.59,NA,NA,NA,NA,NA,NA,"stop","N4* Y35L G116A",3
"lib1","SARS-CoV-2","AGAAAGAGAATCTGTC",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N13M G74D",3
"lib1","SARS-CoV-2","AGAAAGAGAGCAGCTG",1,31.37,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44A Y91D A105F L131G C150N Q176L",6
"lib1","SARS-CoV-2","AGAAAGAGCAAAACAA",2,0.5,NA,NA,NA,NA,NA,NA,"stop","V37W K87* G174M",3
"lib1","SARS-CoV-2","AGAAAGATAAAAGCGC",6,84.55,9.96,-0.81,0.09,1.94,1.07,0,">1 nonsynonymous","D98A A105V",2
"lib1","SARS-CoV-2","AGAAAGATAGCATACC",1,5.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGAAAGATTACATAAT",4,25.18,10.23,-0.53,0.16,2.33,1,0.01,">1 nonsynonymous","T63N E76S",2
"lib1","SARS-CoV-2","AGAAAGCAAAAGGCCT",1,10.69,6,-4.76,2,3,1.05,0,">1 nonsynonymous","G9R F70L D112M N130E Q163M",5
"lib1","SARS-CoV-2","AGAAAGCAACGGGATT",5,60.71,10.78,0.01,0.07,2.85,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAAAGCAATAAGGTA",2,25.26,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I2Y R127T C158P",3
"lib1","SARS-CoV-2","AGAAAGCATCAAGAAT",9,104.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56M T85W N107A R124I",4
"lib1","SARS-CoV-2","AGAAAGCATGACTCAT",6,1.13,NA,NA,NA,NA,NA,NA,"stop","C61* I72T K128A",3
"lib1","SARS-CoV-2","AGAAAGCATTTAGCAT",5,38.6,9.77,-1,0.15,1.94,1.08,0.01,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","AGAAAGCCGACAGTCG",4,35.08,8.63,-2.13,0.1,2.97,1.05,0.01,">1 nonsynonymous","F47M F156M Q168E",3
"lib1","SARS-CoV-2","AGAAAGCCGATGTTAC",5,11.57,8.7,-2.06,0.27,1.5,1.12,0.05,">1 nonsynonymous","L5H N92S P149L A190Y S200L",5
"lib1","SARS-CoV-2","AGAAAGCCGCACAATA",4,19.24,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","N1L T15L S113L",3
"lib1","SARS-CoV-2","AGAAAGCCTCGTAACA",3,119.81,8.99,-1.77,0.09,2.5,1.1,0,">1 nonsynonymous","R16V F44N D90C",3
"lib1","SARS-CoV-2","AGAAAGCGCTGATCGA",6,100.76,8.57,-2.19,0.15,2.07,1.13,0.01,">1 nonsynonymous","G9S A105Y E154Y",3
"lib1","SARS-CoV-2","AGAAAGCTATCAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9H S41T P96*",3
"lib1","SARS-CoV-2","AGAAAGCTCAAGTGCA",7,44.36,9.33,-1.43,0.27,1.5,1.23,0.03,">1 nonsynonymous","E76G D90R",2
"lib1","SARS-CoV-2","AGAAAGGCATAGACGA",9,57.26,8.9,-1.86,0.09,2.86,1.05,0,">1 nonsynonymous","G9A N58T G117M",3
"lib1","SARS-CoV-2","AGAAAGGCCCTAAAAT",7,5.8,NA,NA,NA,NA,NA,NA,"stop","N4I F99D G116*",3
"lib1","SARS-CoV-2","AGAAAGGCTGTAAAAG",8,48.64,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F47I K94D S113F Y119S V153L G174R",6
"lib1","SARS-CoV-2","AGAAAGGGTCAACCGG",1,24.03,6.73,-4.04,0.77,1.5,1.12,0.08,">1 nonsynonymous","Q84I L95H S139Y A145I",4
"lib1","SARS-CoV-2","AGAAAGGTGAATCATT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P P7W T55N N107V",4
"lib1","SARS-CoV-2","AGAAAGGTGGACTTTG",1,33.04,8.81,-1.95,0.15,1.82,1.04,0.01,">1 nonsynonymous","L5A G86S G116S",3
"lib1","SARS-CoV-2","AGAAAGTAAACCTATT",9,3.59,NA,NA,NA,NA,NA,NA,"stop","Q144P G172*",2
"lib1","SARS-CoV-2","AGAAAGTAGTTTCATG",3,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24T V103H G152C",3
"lib1","SARS-CoV-2","AGAAAGTATATATAAA",11,52.15,6,-4.76,2,3,1.21,0,">1 nonsynonymous","A14W L60C W106V C150L",4
"lib1","SARS-CoV-2","AGAAAGTATTAGCAGA",3,112.54,8.89,-1.87,0.11,1.97,1.12,0,">1 nonsynonymous","K48L K132T G155F",3
"lib1","SARS-CoV-2","AGAAAGTATTGAAGTA",3,1.4,NA,NA,NA,NA,NA,NA,"stop","T3E D34T T46*",3
"lib1","SARS-CoV-2","AGAAAGTCGAACGTCA",9,97.21,9.86,-0.91,0.09,2.68,1.05,0,">1 nonsynonymous","C31G K56M D98N",3
"lib1","SARS-CoV-2","AGAAAGTCTCTAACCA",7,9.17,6,-4.76,0.98,1.5,1.15,0.01,">1 nonsynonymous","K114P F126I L162Y",3
"lib1","SARS-CoV-2","AGAAAGTGGGGGTCAG",2,60.23,9.76,-1.01,0.14,2.33,1.02,0.01,">1 nonsynonymous","G9L P161S",2
"lib1","SARS-CoV-2","AGAAAGTTAAAGCGAG",5,86,10.75,-0.01,0.05,2.95,1,0,">1 nonsynonymous","K48I K128S",2
"lib1","SARS-CoV-2","AGAAAGTTAATATACT",3,56.14,10.29,-0.48,0.07,2.92,1.01,0,">1 nonsynonymous","C6S Y39L",2
"lib1","SARS-CoV-2","AGAAAGTTAGTGCTGA",4,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R I72L S200K",3
"lib1","SARS-CoV-2","AGAAAGTTTAAATAGC",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71E Y121A G166S",3
"lib1","SARS-CoV-2","AGAAAGTTTCAAGATC",4,19.64,6,-4.76,2,1.5,1.13,0.03,"1 nonsynonymous","I88D",1
"lib1","SARS-CoV-2","AGAAATAAAAATCCTG",6,93.39,9.01,-1.75,0.19,1.5,1.1,0.01,">1 nonsynonymous","F17R D97I",2
"lib1","SARS-CoV-2","AGAAATAAACTTAAAA",4,2.42,NA,NA,NA,NA,NA,NA,"stop","K26* Y119G",2
"lib1","SARS-CoV-2","AGAAATAAACTTTAGG",2,17.02,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","L95R F156L",2
"lib1","SARS-CoV-2","AGAAATAAATACTCCT",2,44.93,10.49,-0.27,0.07,2.88,1.05,0,">1 nonsynonymous","G51N Q144G P149L K199I",4
"lib1","SARS-CoV-2","AGAAATAACATTTCGA",1,38.49,10.05,-0.72,0.04,2.58,1.07,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","AGAAATAAGAACCTTC",15,139.19,6,-4.76,1.71,1.5,1.2,0.01,">1 nonsynonymous","T15A W23K Y39L C61P Q144N",5
"lib1","SARS-CoV-2","AGAAATAAGACTAAAT",1,16.08,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","D59G V103R G116F E141S",4
"lib1","SARS-CoV-2","AGAAATAAGGTCAACC",9,67.7,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49R D68V D90T T201I",4
"lib1","SARS-CoV-2","AGAAATACAACAACTT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","W23K D68* G174P",3
"lib1","SARS-CoV-2","AGAAATACACCTATCG",3,51.1,9.9,-0.87,0.1,1.87,1.13,0,">1 nonsynonymous","G51I K87S Q163M",3
"lib1","SARS-CoV-2","AGAAATACATTGATTA",11,92.58,6.23,-4.54,0.77,1.5,1.25,0.03,">1 nonsynonymous","S41A A42D C49I F167A P177L",5
"lib1","SARS-CoV-2","AGAAATACCTCACATA",4,108.66,6.12,-4.64,0.55,1.5,1.13,0.01,">1 nonsynonymous","P54K N120T N157K",3
"lib1","SARS-CoV-2","AGAAATACGACGTGAC",6,153.82,10.14,-0.62,0.06,2.71,1.03,0,">1 nonsynonymous","I28M P133R",2
"lib1","SARS-CoV-2","AGAAATACGTACCATA",4,50.54,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","R124V H189N",2
"lib1","SARS-CoV-2","AGAAATAGAATCGAAC",3,33.71,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E135A C158A",2
"lib1","SARS-CoV-2","AGAAATAGAGCAAGAC",5,28.6,10.74,-0.03,0.05,2.95,1.03,0,">1 nonsynonymous","T3H N64K K199H",3
"lib1","SARS-CoV-2","AGAAATAGCAATTTAC",3,56.8,8.83,-1.94,0.15,1.52,1.14,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","AGAAATAGCGAAGTCT",1,23.67,10.53,-0.24,0.06,2.96,1,0,">1 nonsynonymous","E10R N64Y T201L",3
"lib1","SARS-CoV-2","AGAAATATAAGAACGC",1,12.83,6,-4.76,2,3,1.08,0,">1 nonsynonymous","R136L F167S S184A",3
"lib1","SARS-CoV-2","AGAAATATAGTGAAAG",2,6.14,8.92,-1.84,0.27,1.61,1.09,0.05,">1 nonsynonymous","R27F R127N",2
"lib1","SARS-CoV-2","AGAAATATCTGAGAAT",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D98Y L122S",3
"lib1","SARS-CoV-2","AGAAATATGGGTTATG",3,90.87,10.64,-0.12,0.05,2.97,1,0,"1 nonsynonymous","E135D",1
"lib1","SARS-CoV-2","AGAAATATTTTTGTCT",1,20.02,10.81,0.05,0.09,2.94,1.02,0,"1 nonsynonymous","N64F",1
"lib1","SARS-CoV-2","AGAAATCAACAAGCCA",5,50.2,6,-4.76,1.91,1.5,1.16,0.01,">1 nonsynonymous","D112I S139P P169A",3
"lib1","SARS-CoV-2","AGAAATCAATGGAACC",5,37.87,10.26,-0.51,0.07,2.86,1.01,0,">1 nonsynonymous","Y121W P197T",2
"lib1","SARS-CoV-2","AGAAATCACATAACAG",3,46.02,10.57,-0.19,0.08,2.9,1.02,0,">1 nonsynonymous","G9F S36K",2
"lib1","SARS-CoV-2","AGAAATCACATAATAC",3,9.85,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y50M I104G",2
"lib1","SARS-CoV-2","AGAAATCACGCCATAT",3,139.64,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","T170C Y175M",2
"lib1","SARS-CoV-2","AGAAATCACTGTTCCG",2,7.65,6.76,-4,0.66,1.5,1.28,0.02,">1 nonsynonymous","S41E K56M N109H V181K",4
"lib1","SARS-CoV-2","AGAAATCAGAGTACTG",2,69.75,10.37,-0.4,0.03,2.87,1.03,0,">1 nonsynonymous","K56M F62L V103I E141D",4
"lib1","SARS-CoV-2","AGAAATCCAATCAATC",5,31.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92F",1
"lib1","SARS-CoV-2","AGAAATCCAATCAGCC",3,52.06,8.6,-2.16,0.16,1.5,1.13,0.01,"1 nonsynonymous","G86Q",1
"lib1","SARS-CoV-2","AGAAATCCCCTTACCC",19,172.96,6.95,-3.81,0.27,1.5,1.17,0.01,">1 nonsynonymous","G9P A105S G116K P161S",4
"lib1","SARS-CoV-2","AGAAATCCCGTGAAAC",1,41.51,8.07,-2.7,0.19,1.5,1.27,0.01,">1 nonsynonymous","K87G G152I S184L",3
"lib1","SARS-CoV-2","AGAAATCCCTCGATTA",3,61.99,10.55,-0.21,0.05,2.92,1.02,0,">1 nonsynonymous","G146A V173E",2
"lib1","SARS-CoV-2","AGAAATCGAATCATAG",8,598.31,6.64,-4.12,0.36,1.5,1.15,0.02,">1 nonsynonymous","V103L F160L",2
"lib1","SARS-CoV-2","AGAAATCGCCTGCACG",1,72.51,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A42Y T148M Y159S",3
"lib1","SARS-CoV-2","AGAAATCTAATTAAAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I S45T G152V L162K P197A",5
"lib1","SARS-CoV-2","AGAAATCTACTGTTGA",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L Y119N L131R V173N",4
"lib1","SARS-CoV-2","AGAAATCTCAATGATA",2,12.92,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","C6A L57C L122S N171D",4
"lib1","SARS-CoV-2","AGAAATCTCAATTAAG",2,5.16,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","AGAAATCTGAAACATT",1,37.92,10.08,-0.68,0.11,2.16,1.07,0,">1 nonsynonymous","I104S V115H",2
"lib1","SARS-CoV-2","AGAAATGACATTCTTA",5,46.08,10.19,-0.57,0.09,2.46,1.02,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","AGAAATGACGTAATAT",1,5.05,NA,NA,NA,NA,NA,0.36,"1 nonsynonymous","L95G",1
"lib1","SARS-CoV-2","AGAAATGAGTTACCAA",1,36.97,10.7,-0.07,0.08,2.93,1.06,0,"1 nonsynonymous","T15E",1
"lib1","SARS-CoV-2","AGAAATGATGAAGGGT",5,55.35,10.19,-0.58,0.07,2.8,1,0,">1 nonsynonymous","D75L P133A",2
"lib1","SARS-CoV-2","AGAAATGCATTCAGAT",1,8.5,10.76,0,0.13,2.84,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAAATGCCAACTAAA",3,20.2,10.74,-0.02,0.1,2.92,1.04,0,">1 nonsynonymous","T148L A192V",2
"lib1","SARS-CoV-2","AGAAATGGAACCCCGT",3,101.42,10.69,-0.07,0.05,2.82,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAATGGACTGGTTT",3,72.07,10.82,0.06,0.07,2.9,1.05,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","AGAAATGGAGGTTGGC",6,0.16,NA,NA,NA,NA,NA,NA,"stop","I142N C158*",2
"lib1","SARS-CoV-2","AGAAATGTAAACAGGA",3,11.62,NA,NA,NA,NA,NA,NA,"stop","S147A V153K Y178*",3
"lib1","SARS-CoV-2","AGAAATGTACATCAAG",6,1.01,NA,NA,NA,NA,NA,NA,"stop","L95* G116V",2
"lib1","SARS-CoV-2","AGAAATGTATGGGATT",9,76.23,10.33,-0.44,0.07,2.77,1.03,0,">1 nonsynonymous","T3A D98M",2
"lib1","SARS-CoV-2","AGAAATGTGTATACTC",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71G A89K",2
"lib1","SARS-CoV-2","AGAAATTAAACTTGTC",1,33.87,10.39,-0.37,0.16,2.76,1.2,0.01,">1 nonsynonymous","A22K V37G R78V",3
"lib1","SARS-CoV-2","AGAAATTAAAGACTTA",7,65.19,10.84,0.07,0.05,2.92,1.01,0,">1 nonsynonymous","S36M A42H T100W N151Q N171W",5
"lib1","SARS-CoV-2","AGAAATTAACCGGACT",1,6.67,6,-4.76,1.86,3,1.01,0,">1 nonsynonymous","F12R F44R T55L N92L N157S P169D P197A",7
"lib1","SARS-CoV-2","AGAAATTAAGTGTCCA",12,116.38,9.89,-0.88,0.12,1.84,1.11,0.01,">1 nonsynonymous","T3L F8G",2
"lib1","SARS-CoV-2","AGAAATTACCAGTAGC",1,1.77,NA,NA,NA,NA,NA,NA,"stop","S19* Y143F G166A",3
"lib1","SARS-CoV-2","AGAAATTACCCTAAAA",1,29.66,10.75,-0.01,0.04,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAATTACCGGAGTT",1,30.24,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","K56P N64V K114E Y121D",4
"lib1","SARS-CoV-2","AGAAATTACTAGACGG",6,2.74,NA,NA,NA,NA,NA,NA,"stop","D97E I138N F167*",3
"lib1","SARS-CoV-2","AGAAATTAGGACAATA",1,5.06,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41P K94A G146F",3
"lib1","SARS-CoV-2","AGAAATTATAATGAAC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","G9* V180R K198Y",3
"lib1","SARS-CoV-2","AGAAATTCTTGAAGTT",2,51.85,10.56,-0.21,0.06,2.92,1.04,0,">1 nonsynonymous","G9Q A145V S164T",3
"lib1","SARS-CoV-2","AGAAATTCTTTCCATT",4,52.72,10.11,-0.66,0.06,2.8,1.01,0,">1 nonsynonymous","I104T G155S",2
"lib1","SARS-CoV-2","AGAAATTGAACACCAA",3,93.27,6.57,-4.2,0.4,1.5,1.18,0.02,"1 nonsynonymous","P82F",1
"lib1","SARS-CoV-2","AGAAATTGACCTATAT",2,18.29,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F12E F62A L95M F126D",4
"lib1","SARS-CoV-2","AGAAATTGCTTACGAT",4,100.07,10.79,0.02,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAATTGGCAGCAAG",3,4.05,NA,NA,NA,NA,NA,NA,"stop","V103* Y178H",2
"lib1","SARS-CoV-2","AGAAATTGGGATGTAA",4,59.44,8.52,-2.25,0.2,1.5,1.12,0.01,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","AGAAATTGTACTAAAA",2,97.01,6.44,-4.32,0.38,1.5,1.14,0.01,">1 nonsynonymous","L5T L57I N157C",3
"lib1","SARS-CoV-2","AGAAATTTAATTCCAA",7,0.46,NA,NA,NA,NA,NA,NA,"stop","P7T V37H K56* G86V D98A V103R",6
"lib1","SARS-CoV-2","AGAAATTTACCACGTT",2,17.15,6,-4.76,1.94,1.5,1.1,0.01,">1 nonsynonymous","Y93C E154A",2
"lib1","SARS-CoV-2","AGAACAAAAAAAACAA",2,65.02,6.2,-4.57,0.52,1.5,1.16,0.01,"1 nonsynonymous","N92I",1
"lib1","SARS-CoV-2","AGAACAAAAAACCCAA",6,81.28,9.14,-1.63,0.18,1.54,1.15,0.01,">1 nonsynonymous","E76T F160V",2
"lib1","SARS-CoV-2","AGAACAAAAACTTAAA",4,19.45,8.58,-2.18,0.34,1.88,1.18,0.04,">1 nonsynonymous","P7E A42M V77E K114W",4
"lib1","SARS-CoV-2","AGAACAAAAGACACCA",4,39.96,8.48,-2.28,0.19,1.62,1.21,0.01,">1 nonsynonymous","S29V A89M",2
"lib1","SARS-CoV-2","AGAACAAACGCAAACT",2,16.34,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C49D E76K E141W S147K",4
"lib1","SARS-CoV-2","AGAACAAACTCTCCCT",1,44.14,10.83,0.06,0.07,2.97,1.01,0,"1 nonsynonymous","V153A",1
"lib1","SARS-CoV-2","AGAACAAAGTCTTCAA",2,25.7,9.04,-1.73,0.38,1.5,1,0.06,">1 nonsynonymous","L131K P149F Y159N",3
"lib1","SARS-CoV-2","AGAACAAATAAACGCT",1,5.59,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","N1I F99S Y159R",3
"lib1","SARS-CoV-2","AGAACAAATCAGACCT",2,3155.75,10.75,-0.02,0.05,2.93,1.04,0,"1 nonsynonymous","N40D",1
"lib1","SARS-CoV-2","AGAACAAATGATAACC",14,82.18,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D90Y A105P N120M",3
"lib1","SARS-CoV-2","AGAACAACATATATTG",1,0.16,NA,NA,NA,NA,NA,NA,"stop","I2L E141A F156P T201*",4
"lib1","SARS-CoV-2","AGAACAACATCATGAC",3,64.41,10.71,-0.05,0.06,2.92,1.03,0,"1 nonsynonymous","Q84K",1
"lib1","SARS-CoV-2","AGAACAACGGAGGTGA",3,44.62,9.87,-0.89,0.1,2.41,1.14,0,">1 nonsynonymous","T55S G83T I142Y",3
"lib1","SARS-CoV-2","AGAACAACTATGGAAC",4,43.42,9.96,-0.8,0.09,2.31,1.01,0,">1 nonsynonymous","L57M T100S S129F",3
"lib1","SARS-CoV-2","AGAACAACTCAACAAT",1,74.01,10.69,-0.07,0.06,2.9,1.07,0,">1 nonsynonymous","S113A G146S",2
"lib1","SARS-CoV-2","AGAACAAGAAAAGTCG",1,22.25,7.32,-3.44,0.31,1.5,1.13,0.03,">1 nonsynonymous","S69E Y91E",2
"lib1","SARS-CoV-2","AGAACAAGTAGGGTAC",4,1.83,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","AGAACAAGTATGCACA",4,68.27,10.76,0,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAACAAGTTGGACTG",4,31.24,6,-4.76,1.26,1.5,1.17,0.03,">1 nonsynonymous","C6V A14C R25A S41V",4
"lib1","SARS-CoV-2","AGAACAATAACACTTA",1,15.17,10.41,-0.35,0.15,2.7,1.1,0.01,">1 nonsynonymous","R27W V115T",2
"lib1","SARS-CoV-2","AGAACAATACACTCAG",4,52.69,6.1,-4.67,1.07,1.5,1.18,0.03,">1 nonsynonymous","Y93L N107S",2
"lib1","SARS-CoV-2","AGAACAATAGAAGCAG",7,83.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R V103M Y178T",3
"lib1","SARS-CoV-2","AGAACAATATCATGAC",9,67.42,10.78,0.01,0.05,2.93,1.02,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","AGAACAATCCAAGCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136E T170S",2
"lib1","SARS-CoV-2","AGAACAATCTTTACAG",1,10.24,10.5,-0.26,0.18,2.74,1.14,0.03,">1 nonsynonymous","F62S T148L",2
"lib1","SARS-CoV-2","AGAACAATTTATAATT",1,0.98,NA,NA,NA,NA,NA,NA,"stop","T3L E10D I28* E135V",4
"lib1","SARS-CoV-2","AGAACACAAAGTAAAT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","AGAACACAGTAGTTTG",1,15.91,6,-4.76,0.86,3,1.08,0.01,">1 nonsynonymous","L60H A89S V115C V181C",4
"lib1","SARS-CoV-2","AGAACACCACATAGAA",1,46.83,10.61,-0.15,0.09,2.85,1.09,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","AGAACACCCTATAAAA",2,27,10.72,-0.05,0.07,2.95,1.03,0,"1 nonsynonymous","R78N",1
"lib1","SARS-CoV-2","AGAACACCGAAAATTG",5,1.68,NA,NA,NA,NA,NA,NA,"stop","Y119S C150* N171H",3
"lib1","SARS-CoV-2","AGAACACGCGAAACTA",1,8.44,9.91,-0.85,0.4,1.75,1.01,0.03,">1 nonsynonymous","R78M S129L D137E",3
"lib1","SARS-CoV-2","AGAACACGGACTTACG",2,34.16,9.47,-1.29,0.12,1.88,1.03,0.01,">1 nonsynonymous","T100F L131S",2
"lib1","SARS-CoV-2","AGAACACTAACAGCAA",1,33.73,6.3,-4.47,0.7,1.5,1.11,0.06,">1 nonsynonymous","T15S V103L Y119L C158K",4
"lib1","SARS-CoV-2","AGAACACTCAAATTAA",10,97.48,9.69,-1.07,0.08,1.9,1.09,0,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","AGAACACTGATCCTCG",3,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T F47K N64D",3
"lib1","SARS-CoV-2","AGAACACTTAGGTACA",1,9.46,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N92V T100M",2
"lib1","SARS-CoV-2","AGAACACTTCTAATGT",10,96.02,10.18,-0.58,0.06,2.7,1.07,0,">1 nonsynonymous","V103I I138P",2
"lib1","SARS-CoV-2","AGAACAGACCAACAAT",3,1.01,NA,NA,NA,NA,NA,NA,"stop","R25G G86V N92W D112*",4
"lib1","SARS-CoV-2","AGAACAGACCGGCGAC",5,1.51,NA,NA,NA,NA,NA,NA,"stop","L5K N13A V37* K87S F126D T170R",6
"lib1","SARS-CoV-2","AGAACAGAGATCCTGT",1,34.44,8.97,-1.79,0.29,1.5,1,0.04,">1 nonsynonymous","F8K D90A",2
"lib1","SARS-CoV-2","AGAACAGGGCGTAGTA",8,160.41,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28Q Y175D",2
"lib1","SARS-CoV-2","AGAACATAAAATAAAG",1,7.04,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V37S V115R T148M Y165P",4
"lib1","SARS-CoV-2","AGAACATAATACCATG",2,1.48,NA,NA,NA,NA,NA,NA,"stop","S53L G86R Y93S V115* Y178* R179V",6
"lib1","SARS-CoV-2","AGAACATACACATTAA",2,24.43,10.85,0.08,0.07,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAACATATAAACCTA",3,49.8,6.12,-4.65,1.24,1.5,1.32,0.04,">1 nonsynonymous","N24R D34K V77L N110V N118D L162V",6
"lib1","SARS-CoV-2","AGAACATATATTAATC",2,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I F167L",2
"lib1","SARS-CoV-2","AGAACATCTCACAACA",2,25.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S C61K Q84P E186N L188I",5
"lib1","SARS-CoV-2","AGAACATGAAGCAGGG",9,82.97,8.94,-1.82,0.12,1.5,1.12,0,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","AGAACATGGGATGAGT",4,62.77,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R25K D59Y N118H G146I",4
"lib1","SARS-CoV-2","AGAACATGTACTCGAC",6,117.86,10.03,-0.73,0.1,2.6,1.02,0,">1 nonsynonymous","T3R G9V F160I",3
"lib1","SARS-CoV-2","AGAACATTATTATATT",1,10.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13I G166T G174K",3
"lib1","SARS-CoV-2","AGAACATTTCAATCCT",2,19.11,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","R16K Y21T T100M P161R Y178P T201L",6
"lib1","SARS-CoV-2","AGAACATTTTCTTTAA",1,21.58,10.29,-0.48,0.07,2.82,1.03,0,">1 nonsynonymous","G83N P133E",2
"lib1","SARS-CoV-2","AGAACCAAATTTTCGA",8,44.59,6.08,-4.68,0.45,1.65,1.14,0.01,">1 nonsynonymous","I2K C31T S41A G74T",4
"lib1","SARS-CoV-2","AGAACCAACTGTTAGC",3,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S T55H Y93M F99Y Y165K",5
"lib1","SARS-CoV-2","AGAACCAAGGACGCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V F134A",2
"lib1","SARS-CoV-2","AGAACCACAACATAGA",5,137.47,8.76,-2.01,0.09,2.5,1.09,0,">1 nonsynonymous","F62Q N118K",2
"lib1","SARS-CoV-2","AGAACCACATAAGAAA",6,50,10.72,-0.04,0.06,2.89,1.08,0,"1 nonsynonymous","P149G",1
"lib1","SARS-CoV-2","AGAACCACGAATTAGC",2,8.19,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S29I S113E R136Y",3
"lib1","SARS-CoV-2","AGAACCACTACGGGGA",3,1.85,NA,NA,NA,NA,NA,NA,"stop","R16* K56V Q144S K198M",4
"lib1","SARS-CoV-2","AGAACCACTGTTACTG",15,243.43,10.64,-0.12,0.04,2.91,1.03,0,">1 nonsynonymous","D97G V115A",2
"lib1","SARS-CoV-2","AGAACCAGAAATCACA",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C D98Y L131V Q144S G152P",5
"lib1","SARS-CoV-2","AGAACCAGACCTGGCT",3,47.51,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G83L A89Y Y175S",3
"lib1","SARS-CoV-2","AGAACCAGGGCCCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* N120D P149V P169V",4
"lib1","SARS-CoV-2","AGAACCAGTTCATCCT",14,201.79,10.68,-0.08,0.04,2.96,1.01,0,">1 nonsynonymous","I2L K48L",2
"lib1","SARS-CoV-2","AGAACCAGTTGATAAC",3,37.39,10.73,-0.04,0.04,2.89,1.08,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","AGAACCATAACCGAGT",3,24.11,6.54,-4.22,0.46,1.5,1.14,0.03,">1 nonsynonymous","C61R F70P",2
"lib1","SARS-CoV-2","AGAACCATAATATGAA",6,71.28,10.26,-0.51,0.05,2.86,1.03,0,">1 nonsynonymous","L5Y D34S T55R",3
"lib1","SARS-CoV-2","AGAACCATCTCGAACC",1,9.32,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","N4R S19I P82Y F160C",4
"lib1","SARS-CoV-2","AGAACCATTACACAGG",2,47.09,10.12,-0.64,0.06,2.89,1.04,0,">1 nonsynonymous","G9A S41H T63L Y178N",4
"lib1","SARS-CoV-2","AGAACCATTACGGTAT",1,9.8,6,-4.76,1.94,2.36,1.08,0.01,">1 nonsynonymous","W23K T55Q R73M",3
"lib1","SARS-CoV-2","AGAACCATTTATAACT",2,73.16,10.41,-0.35,0.08,2.77,1.02,0,">1 nonsynonymous","L5M S45G D97M",3
"lib1","SARS-CoV-2","AGAACCCACAGGGATC",1,25.28,6.46,-4.3,0.52,1.5,1.09,0.03,">1 nonsynonymous","V11Y G51A N58Y D112T",4
"lib1","SARS-CoV-2","AGAACCCACTGGCCAC",6,48.15,10.84,0.08,0.08,2.9,1,0,">1 nonsynonymous","I2D V115R H189Y",3
"lib1","SARS-CoV-2","AGAACCCAGAAAGTAA",2,48.22,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D75P F185A",2
"lib1","SARS-CoV-2","AGAACCCATAACAACC",6,12.94,7.66,-3.1,0.47,1.5,1.05,0.08,">1 nonsynonymous","D34L K114L C158L",3
"lib1","SARS-CoV-2","AGAACCCATAATAATG",7,68.72,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","E10H S43T P82E",3
"lib1","SARS-CoV-2","AGAACCCATTTACGTG",3,58.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31R K56S T100K G172P",4
"lib1","SARS-CoV-2","AGAACCCATTTCTTGA",4,22,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","P96K P177T",2
"lib1","SARS-CoV-2","AGAACCCCAACACTAA",1,62.49,10.75,-0.02,0.04,2.86,1.06,0,">1 nonsynonymous","K56M T148K",2
"lib1","SARS-CoV-2","AGAACCCCAATGCTAA",1,5.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89I F99T Y121I G152R",4
"lib1","SARS-CoV-2","AGAACCCCAGTAACCC",8,148.05,8.37,-2.39,0.13,2.28,1.08,0.01,">1 nonsynonymous","V37L S113P",2
"lib1","SARS-CoV-2","AGAACCCCTCAATAGA",2,115.58,10.22,-0.54,0.04,2.93,1.01,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","AGAACCCGGCACTCGC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","C61F G101* S139V",3
"lib1","SARS-CoV-2","AGAACCCGTAAAGTAA",6,63.37,10.04,-0.73,0.1,2.46,1.02,0,">1 nonsynonymous","A14L N40H",2
"lib1","SARS-CoV-2","AGAACCGAATAGGTAA",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q S139F S200M",3
"lib1","SARS-CoV-2","AGAACCGCACAAATTC",4,62.03,10.52,-0.25,0.05,2.93,1,0,">1 nonsynonymous","N4T T15V",2
"lib1","SARS-CoV-2","AGAACCGCATCCCAAA",6,9.8,6,-4.76,1.39,3,1.14,0.01,">1 nonsynonymous","R25P C31Y",2
"lib1","SARS-CoV-2","AGAACCGCGACACAAA",3,30.79,10.66,-0.11,0.11,2.86,1.02,0.01,"1 nonsynonymous","N64F",1
"lib1","SARS-CoV-2","AGAACCGGGCTTGATA",1,14.19,10.25,-0.52,0.26,2.47,1,0.02,">1 nonsynonymous","C61T P149L",2
"lib1","SARS-CoV-2","AGAACCGGTTCCTGAA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","F44* K128D P161S",3
"lib1","SARS-CoV-2","AGAACCGTAGTTATAC",11,258.2,10.8,0.04,0.06,2.89,1.06,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","AGAACCGTTACCAATA",2,48.83,9.14,-1.62,0.06,2.81,1.08,0,">1 nonsynonymous","S53G T170L",2
"lib1","SARS-CoV-2","AGAACCGTTGATTAAA",6,84.88,10.71,-0.05,0.06,2.89,1.07,0,">1 nonsynonymous","D97V I138L T148A",3
"lib1","SARS-CoV-2","AGAACCGTTTATGAGG",2,38.25,10.78,0.02,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAACCTAATCATCCG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","L5* C61* V71G G83N",4
"lib1","SARS-CoV-2","AGAACCTACAAATAGA",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F C49D A67N",3
"lib1","SARS-CoV-2","AGAACCTATATGCAAA",9,172.38,10.69,-0.07,0.04,2.94,1.02,0,"1 nonsynonymous","T63R",1
"lib1","SARS-CoV-2","AGAACCTCAATCCAAT",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11H Y121V",2
"lib1","SARS-CoV-2","AGAACCTGAAATTAAG",6,157.66,9.7,-1.07,0.08,2.58,1.07,0,">1 nonsynonymous","I2S N13R T100K Y123R",4
"lib1","SARS-CoV-2","AGAACCTGACCTAATA",3,23.69,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","Y21T S29L F44V K94I E141V F156S Q176L",7
"lib1","SARS-CoV-2","AGAACCTTTCACCAGA",8,39.94,9.62,-1.14,0.11,1.85,1.09,0,"1 nonsynonymous","P82A",1
"lib1","SARS-CoV-2","AGAACGAAAATTCACG",2,56.66,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N4M I88Y",2
"lib1","SARS-CoV-2","AGAACGAAACATGTGA",6,61.57,10.65,-0.11,0.04,2.92,1.05,0,">1 nonsynonymous","S36R C61Q",2
"lib1","SARS-CoV-2","AGAACGAACTAAAAAC",2,27.47,9.04,-1.72,0.12,1.87,1.2,0.01,">1 nonsynonymous","T100D S113G L122I",3
"lib1","SARS-CoV-2","AGAACGAGGAGGGCCT",1,12.06,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","R25M C49T T55S D98G K114M P133R",6
"lib1","SARS-CoV-2","AGAACGAGGAGTTTCT",4,31.99,9.25,-1.51,0.23,1.5,1.01,0.03,">1 nonsynonymous","G9V D90H F126L S164M",4
"lib1","SARS-CoV-2","AGAACGATACATGAAC",1,11.28,10.63,-0.14,0.12,2.96,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAACGATAGCCAGAT",4,19.81,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","W106V P161W Q168W",3
"lib1","SARS-CoV-2","AGAACGATTAATTAAA",5,53.21,9.22,-1.55,0.13,2.16,1.11,0.01,">1 nonsynonymous","N107V S129H",2
"lib1","SARS-CoV-2","AGAACGATTAGTAGCA",2,104.63,6.46,-4.3,0.42,1.5,1.14,0.02,">1 nonsynonymous","Y121F T140V G146Y Y178N",4
"lib1","SARS-CoV-2","AGAACGATTATGCGCT",5,50.49,9.4,-1.36,0.11,2.68,1.13,0,">1 nonsynonymous","T3Y V37N V115E F126V",4
"lib1","SARS-CoV-2","AGAACGCAAAACTTAT",10,16.65,NA,NA,NA,NA,NA,NA,"stop","Y50L T100* V173S",3
"lib1","SARS-CoV-2","AGAACGCAGCGCCGAT",3,40.16,10.73,-0.04,0.08,2.88,1.13,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","AGAACGCCACAATGCT",2,16.06,6,-4.76,0.48,2.82,1.1,0,">1 nonsynonymous","E10C L60A D90E C150S",4
"lib1","SARS-CoV-2","AGAACGCCTGAAAAAA",1,25.15,6.48,-4.29,0.31,1.78,1.24,0.01,">1 nonsynonymous","G9M D112H",2
"lib1","SARS-CoV-2","AGAACGCGTTAAATTT",4,30.66,8,-2.77,0.22,1.88,1.15,0.02,">1 nonsynonymous","C61I D90C E135G G166C",4
"lib1","SARS-CoV-2","AGAACGCTCGGCTATA",10,111.52,7.68,-3.09,0.19,1.5,1.17,0.01,">1 nonsynonymous","N40F W106F P169D",3
"lib1","SARS-CoV-2","AGAACGCTTGTCCGCT",5,62.34,7.56,-3.2,0.17,1.59,1.14,0.01,">1 nonsynonymous","P177G T201A",2
"lib1","SARS-CoV-2","AGAACGGACAAGTGCC",3,29.21,10.17,-0.59,0.07,2.77,1,0,">1 nonsynonymous","V37S G83W Q84K",3
"lib1","SARS-CoV-2","AGAACGGAGATATAAA",1,11.86,6.45,-4.31,0.73,1.5,1.16,0.06,"1 nonsynonymous","I80A",1
"lib1","SARS-CoV-2","AGAACGGAGTACAAAG",4,13.26,9.16,-1.6,0.35,1.5,1.21,0.05,">1 nonsynonymous","F44L A89N",2
"lib1","SARS-CoV-2","AGAACGGCACCTTCAT",2,11.92,9.98,-0.78,0.21,2.21,1,0.02,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","AGAACGGCGTTTGCTA",10,237.51,6.43,-4.34,0.32,1.5,1.14,0.01,">1 nonsynonymous","T55W T100H Q144I Y175S",4
"lib1","SARS-CoV-2","AGAACGGCTTGCCCCA",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M C49G I104S",3
"lib1","SARS-CoV-2","AGAACGGTAATAGAGA",2,22.19,6.04,-4.72,0.82,1.56,1.17,0.01,">1 nonsynonymous","L95S A105S S129N",3
"lib1","SARS-CoV-2","AGAACGTACAATGGCT",9,3.38,NA,NA,NA,NA,NA,NA,"stop","A33* Y121E G174L",3
"lib1","SARS-CoV-2","AGAACGTGCATTCGCC",7,105.11,10.14,-0.62,0.05,2.6,1,0,">1 nonsynonymous","T3L V173S",2
"lib1","SARS-CoV-2","AGAACGTGCCACGATG",4,11.61,10.28,-0.49,0.12,2.97,1,0.02,">1 nonsynonymous","L60R K87L T100S L188K",4
"lib1","SARS-CoV-2","AGAACGTGTCATTTGG",11,0.99,NA,NA,NA,NA,NA,NA,"stop","L125* T170P",2
"lib1","SARS-CoV-2","AGAACGTTACACGCAC",5,23.19,10.27,-0.5,0.17,1.92,1.08,0.01,">1 nonsynonymous","N1Q D90R W106K",3
"lib1","SARS-CoV-2","AGAACTAAACCCTAAT",3,171.95,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N24Q A89I R136V Q176L",4
"lib1","SARS-CoV-2","AGAACTAAAGGAGGGA",3,101.19,9.95,-0.82,0.06,2.84,1.07,0,">1 nonsynonymous","V37G F62S G155D",3
"lib1","SARS-CoV-2","AGAACTAAATACTTAA",1,1.13,NA,NA,NA,NA,NA,NA,"stop","D90* S147P",2
"lib1","SARS-CoV-2","AGAACTAACCAAGATA",3,174.88,9.59,-1.18,0.08,2.49,1.11,0,">1 nonsynonymous","K114G N120Y P149L",3
"lib1","SARS-CoV-2","AGAACTAAGACTAATG",3,55.72,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V11L C31S A81F P133M F156M R179M S200I",7
"lib1","SARS-CoV-2","AGAACTAAGCTTGACG",2,19.17,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","T3C V77T P82M",3
"lib1","SARS-CoV-2","AGAACTAATCGCCAAT",6,78.15,10.25,-0.51,0.04,2.93,1.03,0,"1 nonsynonymous","E10C",1
"lib1","SARS-CoV-2","AGAACTAATGAACTCT",4,32.18,8.48,-2.29,0.13,2.65,1.08,0.01,">1 nonsynonymous","K87S I142N",2
"lib1","SARS-CoV-2","AGAACTACAAGTGATG",9,156.01,10.17,-0.59,0.06,2.84,1.01,0,">1 nonsynonymous","C6S K199V",2
"lib1","SARS-CoV-2","AGAACTACGAATTTCA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126C C158G H189M",3
"lib1","SARS-CoV-2","AGAACTACGCCTAGAC",9,80.83,8.42,-2.34,0.15,1.5,1.13,0.01,">1 nonsynonymous","D90H D97Y N120A G155W P197T",5
"lib1","SARS-CoV-2","AGAACTAGATGTACCA",5,187.31,9.44,-1.33,0.05,2.86,1.09,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","AGAACTAGCGGTGCAA",6,125.81,9.79,-0.97,0.12,2.42,1.03,0.01,">1 nonsynonymous","I2L V11S C61N",3
"lib1","SARS-CoV-2","AGAACTAGTGTGACTG",6,22.37,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","C61I I72F A81L E135L T201M",5
"lib1","SARS-CoV-2","AGAACTATCCACTTAG",5,1.73,NA,NA,NA,NA,NA,NA,"stop","Y35S S69* L95R T201L",4
"lib1","SARS-CoV-2","AGAACTATGTGCACCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S45F T85V N110S N118* N151P G174L",6
"lib1","SARS-CoV-2","AGAACTATTACCAGAA",2,49.3,10.83,0.07,0.04,2.92,1.04,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","AGAACTCAAAACTCAA",16,139.4,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N24P Y91Q Y121T E135M",4
"lib1","SARS-CoV-2","AGAACTCACATGTTAG",2,18.22,8.35,-2.42,0.11,2.93,1.07,0.01,">1 nonsynonymous","S113I S200V",2
"lib1","SARS-CoV-2","AGAACTCATGAACGCG",14,119.13,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12R S45L L57W G86L",4
"lib1","SARS-CoV-2","AGAACTCCACTCCTTG",6,9.53,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","C61A D68W N107D",3
"lib1","SARS-CoV-2","AGAACTCCCAAGTCTG",1,18.57,10.81,0.04,0.09,2.82,1.11,0.01,">1 nonsynonymous","I28Y N64V",2
"lib1","SARS-CoV-2","AGAACTCCCCAACGTA",6,150.88,10.05,-0.72,0.07,2.22,1.02,0,">1 nonsynonymous","F47N T201Q",2
"lib1","SARS-CoV-2","AGAACTCCCTCAGCTA",1,10.87,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","F62T S139L F167V V173L",4
"lib1","SARS-CoV-2","AGAACTCCCTTGCTGT",1,19.15,9.32,-1.44,0.21,1.81,1.18,0.02,">1 nonsynonymous","V11A A33E N151G",3
"lib1","SARS-CoV-2","AGAACTCCGGGGATCA",3,21.09,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","G86K P149S L183C",3
"lib1","SARS-CoV-2","AGAACTCGAAAACTGA",2,28.39,9.87,-0.9,0.1,2.34,1.05,0,">1 nonsynonymous","A33R A42Q S147C P197R",4
"lib1","SARS-CoV-2","AGAACTCTACTCAGTA",2,31.22,10.07,-0.7,0.11,2.34,1.02,0.01,">1 nonsynonymous","C102I S129F",2
"lib1","SARS-CoV-2","AGAACTCTGTCAATCT",3,56.89,9.42,-1.35,0.13,1.76,1.07,0.01,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","AGAACTGAAGTTCTTT",4,60.88,10.58,-0.18,0.26,2.15,1.01,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AGAACTGAATAGATGA",2,7.25,6.19,-4.58,0.74,3,1.13,0.02,">1 nonsynonymous","I2N T63R D98E V103R G117D T148D Q163K G174N",8
"lib1","SARS-CoV-2","AGAACTGACTAATGAA",2,15.72,8.17,-2.59,0.31,1.5,1.03,0.05,">1 nonsynonymous","S45Y S53I I88L",3
"lib1","SARS-CoV-2","AGAACTGAGGAAAGAT",4,51.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61D N64A G86Y F134Y Y143Q Y175D",6
"lib1","SARS-CoV-2","AGAACTGATCCCCTGT",7,204.42,10.67,-0.09,0.04,2.87,1.05,0,">1 nonsynonymous","G9A G116N",2
"lib1","SARS-CoV-2","AGAACTGCAAACTTAG",5,0.68,NA,NA,NA,NA,NA,NA,"stop","V11P T55* D112C",3
"lib1","SARS-CoV-2","AGAACTGCAGCGACCA",2,36.1,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","C49D N120P",2
"lib1","SARS-CoV-2","AGAACTGCATTTTGTA",6,178.06,10.51,-0.25,0.04,2.91,1.03,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","AGAACTGGCCTACGGT",9,268.25,10.73,-0.03,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAACTGGTAAACTCA",9,39.09,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","C102R S200F",2
"lib1","SARS-CoV-2","AGAACTTAACCACGAC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C31*",1
"lib1","SARS-CoV-2","AGAACTTAAGGCGTCC",2,105.86,9.34,-1.42,0.07,2.41,1.1,0,">1 nonsynonymous","D34N L60V Q176M",3
"lib1","SARS-CoV-2","AGAACTTACCACGGAC",4,123.3,8.49,-2.27,0.11,2.49,1.09,0.01,">1 nonsynonymous","F44D N64C D90T Y119N",4
"lib1","SARS-CoV-2","AGAACTTAGAAATTAT",7,36.96,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","T55L P161F",2
"lib1","SARS-CoV-2","AGAACTTAGAATCTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N Y123E E154M",3
"lib1","SARS-CoV-2","AGAACTTAGGCGAAAT",4,27.49,9.16,-1.61,0.29,1.5,1,0.04,">1 nonsynonymous","I2M F17W P96L K128R T201N",5
"lib1","SARS-CoV-2","AGAACTTAGGTAAACA",3,22.9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99Q N120E E186V",3
"lib1","SARS-CoV-2","AGAACTTATATAGCAT",1,5.69,9.19,-1.58,0.23,1.94,1.01,0.02,"1 nonsynonymous","F8R",1
"lib1","SARS-CoV-2","AGAACTTATCCAAACC",8,11.92,NA,NA,NA,NA,NA,NA,"stop","A22*",1
"lib1","SARS-CoV-2","AGAACTTATTTGAGTA",3,56.41,10.6,-0.17,0.06,2.84,1.07,0,">1 nonsynonymous","F12I P54F D59N",3
"lib1","SARS-CoV-2","AGAACTTCATATAAAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","N1F S41K C102* L111I",4
"lib1","SARS-CoV-2","AGAACTTCTGAACCGC",3,31.13,6.39,-4.37,0.47,1.5,1.16,0.02,">1 nonsynonymous","V20M G83N N120M Q163V",4
"lib1","SARS-CoV-2","AGAACTTGATGTTCTA",3,14.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L95Q Y123C",2
"lib1","SARS-CoV-2","AGAACTTTTCTAACGG",1,74.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V E10V S41M G117T",4
"lib1","SARS-CoV-2","AGAACTTTTGAACCAT",3,56.08,10.68,-0.09,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGAAAAAACCATG",1,6.6,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","R73M C150L",2
"lib1","SARS-CoV-2","AGAAGAAAACGCTGTT",2,19.45,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F8T C49F D90W",3
"lib1","SARS-CoV-2","AGAAGAAAATCGGTTG",2,0.26,NA,NA,NA,NA,NA,NA,"stop","N58* L125S",2
"lib1","SARS-CoV-2","AGAAGAAACAACATTA",7,25.09,10.78,0.01,0.07,2.91,1.04,0,"1 nonsynonymous","Y39H",1
"lib1","SARS-CoV-2","AGAAGAAACGTTGCTG",4,70.12,10.09,-0.68,0.04,2.87,1.07,0,">1 nonsynonymous","L125E N171F G196E",3
"lib1","SARS-CoV-2","AGAAGAAACTACCATA",1,39.47,9.95,-0.81,0.09,2.48,1.08,0,">1 nonsynonymous","F12T V115M L122H",3
"lib1","SARS-CoV-2","AGAAGAAAGACGGACG",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58M P82A S200R",3
"lib1","SARS-CoV-2","AGAAGAAAGCTCTATT",2,95.31,10.68,-0.08,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGAAATAACGAAT",6,42.78,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12M I80K D98S A105R E141N T148A T201N",7
"lib1","SARS-CoV-2","AGAAGAACAAAAGCCG",1,26.07,8.6,-2.16,0.16,1.92,1.08,0.01,">1 nonsynonymous","G86S G155S",2
"lib1","SARS-CoV-2","AGAAGAACAAATAATG",9,0.68,NA,NA,NA,NA,NA,NA,"stop","T15* L60K D137W G166I A192E",5
"lib1","SARS-CoV-2","AGAAGAACTAGCGATA",8,59.3,9.78,-0.99,0.33,1.5,1,0.04,"1 nonsynonymous","K94P",1
"lib1","SARS-CoV-2","AGAAGAAGAATCTATA",10,329.05,9.73,-1.04,0.07,2.28,1.07,0,">1 nonsynonymous","C6A T148G L187R",3
"lib1","SARS-CoV-2","AGAAGAAGAGTCCTTC",3,60.8,10.55,-0.22,0.07,2.93,1.02,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","AGAAGAAGTTACTTTC",5,251.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A42W D59I Q79L Y175T",4
"lib1","SARS-CoV-2","AGAAGAATAATACACC",9,0.44,NA,NA,NA,NA,NA,NA,"stop","I2F V37* F62P D97S",4
"lib1","SARS-CoV-2","AGAAGAATAGATTCAT",5,5.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152W",1
"lib1","SARS-CoV-2","AGAAGAATATGAAGTG",4,59.79,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y21K I28Q G116N E141N",4
"lib1","SARS-CoV-2","AGAAGAATATTACCAA",1,14.62,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","F17R F44Y L95C S129H",4
"lib1","SARS-CoV-2","AGAAGAATGAGGTGCA",3,42.13,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","W23E N118V",2
"lib1","SARS-CoV-2","AGAAGAATTGGAATAA",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P D90M L125R",3
"lib1","SARS-CoV-2","AGAAGACACCATGGTT",9,101.46,10.72,-0.04,0.06,2.9,1.05,0,"1 nonsynonymous","K128M",1
"lib1","SARS-CoV-2","AGAAGACACTGGCGTA",5,28.82,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y119T V182M",2
"lib1","SARS-CoV-2","AGAAGACAGCGCGATG",1,19.9,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","F17V V32P T63I V181F",4
"lib1","SARS-CoV-2","AGAAGACCTTTACGAA",7,43.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68E G116L G146D",3
"lib1","SARS-CoV-2","AGAAGACGACAACCAG",3,87.72,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","A14E Y35S P149S F167L Y178K",5
"lib1","SARS-CoV-2","AGAAGACGCAGCTGGG",1,18.63,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","K26Y G83S A105I Y119L G146C",5
"lib1","SARS-CoV-2","AGAAGACTTGAAACCG",5,72.31,7.99,-2.78,0.19,1.5,1.14,0.01,">1 nonsynonymous","E10M D59F I104L S164D S200L",5
"lib1","SARS-CoV-2","AGAAGAGAAACATGGC",5,37.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I L122K G172A",3
"lib1","SARS-CoV-2","AGAAGAGATTCCACAC",11,212.46,10.75,-0.02,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAAGAGCCGCCTAGA",4,14.59,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","I88A L95Q L122M V180Q",4
"lib1","SARS-CoV-2","AGAAGAGGAGTGAAAA",2,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A P169Y",2
"lib1","SARS-CoV-2","AGAAGAGTACGGTCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38S A89T D97* G174S",4
"lib1","SARS-CoV-2","AGAAGAGTCGTAGCCT",6,108.99,10.89,0.12,0.08,2.93,1.02,0,">1 nonsynonymous","N4R G9S V37A T100E N171F",5
"lib1","SARS-CoV-2","AGAAGATATCCCTAAT",3,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y G51Y F62L Q79H D98P P149L",6
"lib1","SARS-CoV-2","AGAAGATATTATTGTT",3,28.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K94A Y121D L162Q P177N",4
"lib1","SARS-CoV-2","AGAAGATCAGCGAGTT",2,30.04,10.63,-0.13,0.05,2.88,1.03,0,">1 nonsynonymous","Q84K V103I",2
"lib1","SARS-CoV-2","AGAAGATGCCGTTATC",3,7.92,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","S36R F99L C158S",3
"lib1","SARS-CoV-2","AGAAGATGTTGGATCA",2,58.01,8.55,-2.21,0.09,2.78,1.06,0,">1 nonsynonymous","N120P G166E",2
"lib1","SARS-CoV-2","AGAAGATTAACTCTAT",4,0.32,NA,NA,NA,NA,NA,NA,"stop","R136* F160S",2
"lib1","SARS-CoV-2","AGAAGATTAGAGAACG",6,78.75,10.59,-0.17,0.06,2.95,1,0,">1 nonsynonymous","P149F S164T",2
"lib1","SARS-CoV-2","AGAAGCAAATACAAGT",3,57.25,9.63,-1.13,0.08,2.82,1.08,0,">1 nonsynonymous","F160A T170P P197R",3
"lib1","SARS-CoV-2","AGAAGCAAGCGCAAAC",1,12.33,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S43L C61R S113I E135S P197G",5
"lib1","SARS-CoV-2","AGAAGCACTTGACCTA",3,68.45,10.78,0.02,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGCAGAAAATGAA",10,113.98,9.83,-0.94,0.08,1.96,1.12,0,">1 nonsynonymous","S41A V77Q A192T",3
"lib1","SARS-CoV-2","AGAAGCAGACGATAAC",14,224.02,10.76,-0.01,0.06,2.93,1.04,0,">1 nonsynonymous","A18P P149L",2
"lib1","SARS-CoV-2","AGAAGCAGCATTGTTA",2,42.38,8.4,-2.36,0.27,1.5,1,0.03,">1 nonsynonymous","S36I S43A A89R",3
"lib1","SARS-CoV-2","AGAAGCAGCCAACGGC",3,0.92,NA,NA,NA,NA,NA,NA,"stop","D34C Q84* I88* P96G R124C P133H F160Y",7
"lib1","SARS-CoV-2","AGAAGCATCGATAAAG",4,113.59,10.75,-0.01,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGCATTGGTCTTA",5,11.51,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","L5I R25T I80P G166S",4
"lib1","SARS-CoV-2","AGAAGCCCCAAAAAAA",3,10.94,7.01,-3.75,0.47,1.5,1.22,0.03,">1 nonsynonymous","I2M G83A P161V",3
"lib1","SARS-CoV-2","AGAAGCCGGGATAAGT",1,20.25,10.29,-0.47,0.07,2.95,1,0,">1 nonsynonymous","P7A P133S",2
"lib1","SARS-CoV-2","AGAAGCCGGGATGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G101* I138D",2
"lib1","SARS-CoV-2","AGAAGCCTGTTTGTGC",3,38.18,6.06,-4.71,1.05,1.5,1.12,0.03,">1 nonsynonymous","N4R A105V R136D",3
"lib1","SARS-CoV-2","AGAAGCGAAGATTCCA",3,24.75,10.88,0.11,0.11,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGCGAGACATAAT",2,33.02,9.16,-1.61,0.19,1.91,1.14,0.02,">1 nonsynonymous","D98I A105C L125A",3
"lib1","SARS-CoV-2","AGAAGCGCAAATACAT",4,42.63,10.71,-0.05,0.09,2.88,1.07,0,">1 nonsynonymous","K26L L60Y",2
"lib1","SARS-CoV-2","AGAAGCGCAACCTATA",9,155.72,9.69,-1.07,0.09,2.52,1.07,0,">1 nonsynonymous","C6G S41F N120F H189T",4
"lib1","SARS-CoV-2","AGAAGCGCGCATGATA",4,96.15,10.57,-0.2,0.05,2.96,1.03,0,">1 nonsynonymous","G9R I104Y",2
"lib1","SARS-CoV-2","AGAAGCGCTCAAATCT",5,139.08,8.34,-2.42,0.17,1.8,1.1,0.01,">1 nonsynonymous","W106K E154R Q168V",3
"lib1","SARS-CoV-2","AGAAGCGGATTGTAAA",5,56.54,10.71,-0.05,0.11,2.89,1.08,0,"1 nonsynonymous","I138M",1
"lib1","SARS-CoV-2","AGAAGCGGCTAGATTA",5,1.95,NA,NA,NA,NA,NA,NA,"stop","A89* S139T T201V",3
"lib1","SARS-CoV-2","AGAAGCGGCTGAAACG",5,3.87,NA,NA,NA,NA,NA,NA,"stop","E141W P177*",2
"lib1","SARS-CoV-2","AGAAGCGGGGGTTACA",7,2.57,NA,NA,NA,NA,NA,NA,"stop","A14V Y66A K87S T170*",4
"lib1","SARS-CoV-2","AGAAGCGTACTATCCT",3,45.92,10.17,-0.59,0.08,2.45,1.01,0,">1 nonsynonymous","F12I R27H L122R S184E",4
"lib1","SARS-CoV-2","AGAAGCGTGCACGCTA",9,76.72,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G51V R73G R78L N92I I138V G146D",6
"lib1","SARS-CoV-2","AGAAGCGTTTTAGCTC",2,27.36,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","F62N G152S Y165V S184I",4
"lib1","SARS-CoV-2","AGAAGCTACGTTATCG",3,8.13,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15N F44K P54A K94F A105K G172R",6
"lib1","SARS-CoV-2","AGAAGCTATAACACCT",7,124.55,6,-4.76,0.79,1.5,1.18,0.01,">1 nonsynonymous","K48E K94I Q176S",3
"lib1","SARS-CoV-2","AGAAGCTATAGACACA",5,1.6,NA,NA,NA,NA,NA,NA,"stop","N1Q L60M Y119* S139H",4
"lib1","SARS-CoV-2","AGAAGCTCACTAAATG",5,76.1,10.26,-0.51,0.04,2.89,1.01,0,">1 nonsynonymous","A18T F62S",2
"lib1","SARS-CoV-2","AGAAGCTCATTAGGAA",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D N92K F99P P133F C195I",5
"lib1","SARS-CoV-2","AGAAGCTGATGCAAAT",5,158.77,6.21,-4.55,0.61,1.5,1.2,0.02,">1 nonsynonymous","F70K K199V",2
"lib1","SARS-CoV-2","AGAAGCTTCAACTCTA",15,217.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9M K48S K128P C150H",4
"lib1","SARS-CoV-2","AGAAGCTTCCCAAAAG",8,122.07,10.77,0.01,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGCTTTCACGGAA",4,7.83,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5M S45F F62V G86S Q163F",5
"lib1","SARS-CoV-2","AGAAGGAAAAAACTAA",4,41.87,6,-4.76,0.88,3,1.12,0,">1 nonsynonymous","F44S V77A D98T D112F",4
"lib1","SARS-CoV-2","AGAAGGAAAATGTAAT",1,25.55,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F12S A105L",2
"lib1","SARS-CoV-2","AGAAGGAACAGGAATG",1,18.05,10.07,-0.7,0.17,2.13,1,0.01,"1 nonsynonymous","K94G",1
"lib1","SARS-CoV-2","AGAAGGAACTAATTTT",1,6.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17V E141N V180K",3
"lib1","SARS-CoV-2","AGAAGGAATAATCAAA",6,71.54,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6W E76L S108A P149K",4
"lib1","SARS-CoV-2","AGAAGGACCAAAGTGG",7,53.38,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T55V L95H N151R V182F",4
"lib1","SARS-CoV-2","AGAAGGACCCTACTTC",9,41.08,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","C49F L162S",2
"lib1","SARS-CoV-2","AGAAGGATCGATTTTG",4,67.91,10.38,-0.39,0.04,2.89,1.02,0,"1 nonsynonymous","V181I",1
"lib1","SARS-CoV-2","AGAAGGCAAATGCCTA",3,12.51,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","S19Q N157M Y178C",3
"lib1","SARS-CoV-2","AGAAGGCAATAATTAT",1,23.11,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6V V52L T63P S113R N120P",5
"lib1","SARS-CoV-2","AGAAGGCCATAGGTCA",6,45.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F17L Q84Y Y91S",3
"lib1","SARS-CoV-2","AGAAGGCCGCCCAACA",2,25.96,9.19,-1.57,0.1,2.88,1.03,0,">1 nonsynonymous","S129C P169C",2
"lib1","SARS-CoV-2","AGAAGGCTACAAAGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","W23Y Y35W G116I R127L T201*",5
"lib1","SARS-CoV-2","AGAAGGCTCAACAAGG",15,135.06,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14N N58S N107G R127W Q168I",5
"lib1","SARS-CoV-2","AGAAGGGACGAACACC",7,23.76,9.94,-0.82,0.2,1.86,1.08,0.02,">1 nonsynonymous","A22E A33P F99L",3
"lib1","SARS-CoV-2","AGAAGGGATCTCCTCT",6,87.21,10.84,0.07,0.1,2.94,1.02,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","AGAAGGGCTAAATCAT",5,73.49,10.76,0,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGGGGAGTAAACC",5,26.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S R16T Y121V K132G F156S",5
"lib1","SARS-CoV-2","AGAAGGTATAATGTAT",6,26.58,10.68,-0.08,0.06,2.92,1,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","AGAAGGTGAAATTAAT",4,14.18,10.59,-0.18,0.13,2.78,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGGTTAACATAAG",3,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L V103R T201Y",3
"lib1","SARS-CoV-2","AGAAGGTTAGTATCTG",4,44.87,6,-4.76,1.33,1.5,1.16,0.03,">1 nonsynonymous","Y39S G86A F99D N118L D137L F167I",6
"lib1","SARS-CoV-2","AGAAGTAAATCCAAAC",2,14.32,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K87V L95T Y143M F185K",4
"lib1","SARS-CoV-2","AGAAGTAAGCACGCTA",1,0.04,NA,NA,NA,NA,NA,NA,"stop","L5G Y119* G146V",3
"lib1","SARS-CoV-2","AGAAGTAATAAAATAA",3,20.49,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V11C S41G G116Y L162A N171H",5
"lib1","SARS-CoV-2","AGAAGTACAAAACCCG",7,34.47,6.57,-4.2,0.67,1.5,1.38,0.05,">1 nonsynonymous","N92S T100S F160C",3
"lib1","SARS-CoV-2","AGAAGTACACAGTAAT",7,174.42,8.12,-2.65,0.17,1.78,1.12,0.01,">1 nonsynonymous","C6V K87A Y119L",3
"lib1","SARS-CoV-2","AGAAGTACAGTAGCAA",2,17.27,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","R16V Y35K N64I D98Y W106R R127S S139V",7
"lib1","SARS-CoV-2","AGAAGTACCCGCACCC",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q Y121K G152V",3
"lib1","SARS-CoV-2","AGAAGTAGCTCCCAAT",10,138.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T15I S19G L38I C61N R73E",5
"lib1","SARS-CoV-2","AGAAGTATAAACGGAG",1,20.75,8.32,-2.45,0.26,1.78,1.08,0.03,">1 nonsynonymous","N107H G174R",2
"lib1","SARS-CoV-2","AGAAGTATCATATGAT",5,24.47,10.77,0,0.1,2.97,1,0.01,">1 nonsynonymous","I2R T55L",2
"lib1","SARS-CoV-2","AGAAGTATTGCAAATA",11,70.25,6.42,-4.35,0.35,1.5,1.19,0.01,">1 nonsynonymous","S45D P96W N157V G174P",4
"lib1","SARS-CoV-2","AGAAGTCAAATTAAGT",3,7.26,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","D59T A67D K132R C150M",4
"lib1","SARS-CoV-2","AGAAGTCAACTGTACT",4,76.37,8.29,-2.48,0.22,1.65,1.17,0.02,">1 nonsynonymous","S113W F156V N171S",3
"lib1","SARS-CoV-2","AGAAGTCACCATGAGG",5,26.35,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y91T P133F Q144W",3
"lib1","SARS-CoV-2","AGAAGTCACCGACACT",2,20.91,10.86,0.09,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGTCACGTCCTAC",3,34.4,7.47,-3.29,0.37,1.5,1.1,0.04,">1 nonsynonymous","D97L R127V",2
"lib1","SARS-CoV-2","AGAAGTCAGATGTCAG",3,61.99,10.76,0,0.03,2.97,1,0,">1 nonsynonymous","S43H D97P",2
"lib1","SARS-CoV-2","AGAAGTCATTATTTCT",1,15.33,10.88,0.11,0.28,2.84,1.05,0.08,">1 nonsynonymous","S147A K198S",2
"lib1","SARS-CoV-2","AGAAGTCCGCTTCATT",7,2.15,NA,NA,NA,NA,NA,NA,"stop","N13L R27H V173C T201*",4
"lib1","SARS-CoV-2","AGAAGTCCTGAAACAG",2,17.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23M D90Y",2
"lib1","SARS-CoV-2","AGAAGTCGACCGAACT",7,85.51,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Q84Y C158P K199S",3
"lib1","SARS-CoV-2","AGAAGTCTCATAAATA",6,16.13,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V52W D75P G83R N151Y Q168R",5
"lib1","SARS-CoV-2","AGAAGTCTCTTTGTCA",8,0.77,NA,NA,NA,NA,NA,NA,"stop","K87* N107H T140Y",3
"lib1","SARS-CoV-2","AGAAGTGAAAACACAG",1,494.18,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R16V F99M A105V",3
"lib1","SARS-CoV-2","AGAAGTGCAACCGATA",2,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F I28A S36N T85L",4
"lib1","SARS-CoV-2","AGAAGTGTCCCACAAA",6,45.54,6.22,-4.54,0.79,1.5,1.21,0.03,">1 nonsynonymous","K48L I88G",2
"lib1","SARS-CoV-2","AGAAGTTAAAAGAGTA",1,46.04,10.27,-0.5,0.06,2.99,1,0,">1 nonsynonymous","S43Y Q168N",2
"lib1","SARS-CoV-2","AGAAGTTAAATACGTA",2,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I C31T N64G P82R",4
"lib1","SARS-CoV-2","AGAAGTTACCACCATG",3,108.82,10.78,0.01,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAAGTTCTACTTTAT",4,17.62,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I28T K56I V153I C158Q R179L",5
"lib1","SARS-CoV-2","AGAAGTTGAGTAAAAC",2,45.68,8.76,-2.01,0.12,1.98,1.16,0.01,">1 nonsynonymous","S19R G174M T201V",3
"lib1","SARS-CoV-2","AGAAGTTTTATTCTAT",2,19.56,10.23,-0.54,0.12,2.9,1.05,0.01,"1 nonsynonymous","R16P",1
"lib1","SARS-CoV-2","AGAAGTTTTTATGTAG",8,470.06,8.18,-2.58,0.13,2.12,1.09,0.01,"1 nonsynonymous","N157V",1
"lib1","SARS-CoV-2","AGAATAAAAATATAAC",5,21.49,6,-4.76,1.59,3,1.29,0,">1 nonsynonymous","G74S D97R Y123P",3
"lib1","SARS-CoV-2","AGAATAAAAATTTGTG",7,118.58,10.67,-0.09,0.03,2.9,1.06,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","AGAATAAAAGCGTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60* Y123D",2
"lib1","SARS-CoV-2","AGAATAAAATATCCGA",4,12.07,10.61,-0.16,0.19,2.9,1,0.01,"1 nonsynonymous","G116V",1
"lib1","SARS-CoV-2","AGAATAAACATATTCA",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S G174R G196A",3
"lib1","SARS-CoV-2","AGAATAAACTAGAATT",7,33.68,6.36,-4.4,0.64,1.5,1.15,0.03,">1 nonsynonymous","C6G A42M N64L A89G F134P",5
"lib1","SARS-CoV-2","AGAATAAATATTAGAA",9,224.61,8.62,-2.14,0.14,1.87,1.14,0.01,">1 nonsynonymous","D98K Q176R",2
"lib1","SARS-CoV-2","AGAATAAATTGATGTT",1,46.1,6,-4.76,1.69,1.5,1.17,0.02,">1 nonsynonymous","C61I R78S T100N A105C Y143W Y159G L188F",7
"lib1","SARS-CoV-2","AGAATAACATACCTCT",4,12.14,7.18,-3.59,0.44,1.5,1.11,0.04,">1 nonsynonymous","N13I Y66L T85Q S129T",4
"lib1","SARS-CoV-2","AGAATAACCTGCTAAT",3,47.07,9.39,-1.37,0.08,2.76,1.1,0,">1 nonsynonymous","Y119M T148H",2
"lib1","SARS-CoV-2","AGAATAACGCGATTTA",2,14.52,10.77,0,0.06,2.95,1,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","AGAATAACGGGCTTGA",1,44.17,10.59,-0.18,0.05,2.95,1.01,0,">1 nonsynonymous","I28Y W106F E141Q",3
"lib1","SARS-CoV-2","AGAATAACTCACCTTC",6,91.84,10.13,-0.64,0.05,2.8,1.08,0,">1 nonsynonymous","I28L V77M F160C",3
"lib1","SARS-CoV-2","AGAATAAGAAACGCAA",2,12.97,10.7,-0.06,0.1,2.89,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAATAAGGAAGGATT",5,134.46,10.48,-0.28,0.07,2.81,1.03,0,">1 nonsynonymous","I104C T148F",2
"lib1","SARS-CoV-2","AGAATAAGGATACCAA",1,55.39,9.72,-1.04,0.13,2.12,1.09,0.01,">1 nonsynonymous","S36K S45Y T63S Q144T",4
"lib1","SARS-CoV-2","AGAATAAGGCGTGTAC",2,22.86,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37L G86W G152L",3
"lib1","SARS-CoV-2","AGAATAAGTTATAATA",4,70.34,10.2,-0.57,0.06,2.81,1.07,0,"1 nonsynonymous","G155L",1
"lib1","SARS-CoV-2","AGAATAATAAAATAAA",2,63.92,9.09,-1.67,0.09,2.69,1.21,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","AGAATAATAATGTAAG",7,107.56,10.14,-0.62,0.11,2.43,1.02,0,">1 nonsynonymous","V52D L60A S200E",3
"lib1","SARS-CoV-2","AGAATAATACAAGAGA",1,23.43,6,-4.76,2,3,1.22,0.01,"1 nonsynonymous","F167K",1
"lib1","SARS-CoV-2","AGAATAATATATTATG",4,45.82,10.59,-0.17,0.19,2.4,1.04,0.02,">1 nonsynonymous","N130P I138W",2
"lib1","SARS-CoV-2","AGAATAATCGAAGGGC",3,32.7,9.89,-0.87,0.11,2.01,1.03,0.01,">1 nonsynonymous","V20S D90Q",2
"lib1","SARS-CoV-2","AGAATAATGGAACTTA",1,17.32,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","W23C S45D Q144G E154V V173E L183S",6
"lib1","SARS-CoV-2","AGAATAATTAGAGGTC",1,9.19,9.68,-1.09,0.22,2.15,1,0.02,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","AGAATAATTCCTTAAC",4,45.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S E154N T170S",3
"lib1","SARS-CoV-2","AGAATAATTTCCCATA",7,161.89,10.72,-0.04,0.07,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAATAATTTCGCATT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","F12L F126E P169*",3
"lib1","SARS-CoV-2","AGAATACAACGTCCAA",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M V20M N40F C61L",4
"lib1","SARS-CoV-2","AGAATACAACTCACTT",3,11.85,6,-4.76,2,3,1.13,0.02,">1 nonsynonymous","S45P P54D I104T V115I",4
"lib1","SARS-CoV-2","AGAATACACAACATCG",3,11.78,10.44,-0.33,0.2,2.86,1,0.02,">1 nonsynonymous","G152I Q168F",2
"lib1","SARS-CoV-2","AGAATACAGCTCACTA",3,17.54,6.36,-4.4,0.74,1.5,1.22,0.05,">1 nonsynonymous","Y35E K94Y T201G",3
"lib1","SARS-CoV-2","AGAATACAGGGAGGAA",2,7.99,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","A89D A105G L122V P149F",4
"lib1","SARS-CoV-2","AGAATACATCAATGAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F8K D59R A105* L122I S129P",5
"lib1","SARS-CoV-2","AGAATACATCATATAT",11,93.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3D F44K P133S R136P",4
"lib1","SARS-CoV-2","AGAATACCACAAATTC",6,49.41,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F70L I88T L125R",3
"lib1","SARS-CoV-2","AGAATACCAGTTCTTG",11,106.18,10.21,-0.56,0.09,2.46,1.01,0,">1 nonsynonymous","Q84T Y93F",2
"lib1","SARS-CoV-2","AGAATACCCAAAAGAA",4,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91C Y165E",2
"lib1","SARS-CoV-2","AGAATACGATAATTAT",3,30.28,10.79,0.03,0.09,2.91,1.07,0,">1 nonsynonymous","N64I F160R",2
"lib1","SARS-CoV-2","AGAATACGTCTATGTT",6,22.78,10.59,-0.18,0.08,2.8,1.17,0,">1 nonsynonymous","L60K S129R",2
"lib1","SARS-CoV-2","AGAATACTAATAAACT",1,8.18,6,-4.76,2,3,1.13,0.03,">1 nonsynonymous","A14L W106R R136A",3
"lib1","SARS-CoV-2","AGAATACTACGTGCAT",9,44.36,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V65G K94I",2
"lib1","SARS-CoV-2","AGAATACTATTAGTCT",3,57.59,10.77,0,0.09,2.92,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AGAATACTCTAAATTC",1,21.89,10.24,-0.52,0.13,2.71,1.06,0.01,"1 nonsynonymous","N40I",1
"lib1","SARS-CoV-2","AGAATACTGGTCCTAT",3,42.21,10.23,-0.53,0.06,2.69,1.09,0,"1 nonsynonymous","R136A",1
"lib1","SARS-CoV-2","AGAATAGAGCAACTTA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L D112M",2
"lib1","SARS-CoV-2","AGAATAGAGTCCGACA",2,31.61,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S19N D75W F156L G166D P197G",5
"lib1","SARS-CoV-2","AGAATAGATAAGATGG",2,0.21,NA,NA,NA,NA,NA,NA,"stop","T63L V77W V103* G174E",4
"lib1","SARS-CoV-2","AGAATAGATTCCCTCG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","F17V T46G T55C A81T Y93K N120* G172R",7
"lib1","SARS-CoV-2","AGAATAGCTCACTATA",8,1386.45,10.09,-0.68,0.05,2.73,1.01,0,">1 nonsynonymous","D90G Q163R",2
"lib1","SARS-CoV-2","AGAATAGCTCTTCATC",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A C61I P96L V103K F156Y",5
"lib1","SARS-CoV-2","AGAATAGCTGCCCGGT",5,43.14,10.11,-0.66,0.12,2.36,1,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","AGAATAGGCTATCAGT",1,5.65,8.36,-2.4,0.4,2.02,1.3,0.04,">1 nonsynonymous","L5G L60V A105C",3
"lib1","SARS-CoV-2","AGAATAGGGAACATTT",2,1,NA,NA,NA,NA,NA,NA,"stop","C6S A81S V103A F160T V173*",5
"lib1","SARS-CoV-2","AGAATAGGGTGCCAGG",12,64.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A81S D90S W106D Y123C",4
"lib1","SARS-CoV-2","AGAATAGGTTTTTAAC",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R S139P",2
"lib1","SARS-CoV-2","AGAATAGTAAAATAAA",1,5.66,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","T15R L38Q V65M D90A W106M Y159N",6
"lib1","SARS-CoV-2","AGAATAGTAGGGTAAA",7,119.52,9.41,-1.35,0.06,2.77,1.13,0,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","AGAATAGTCAAATAAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","I2* T55V Y119F A190G",4
"lib1","SARS-CoV-2","AGAATAGTCTCAATAC",2,21.15,10.27,-0.49,0.09,2.92,1.04,0,">1 nonsynonymous","D98H E141I",2
"lib1","SARS-CoV-2","AGAATAGTCTGCGCTA",3,9.42,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F44M G51R E141F P149M V182P",5
"lib1","SARS-CoV-2","AGAATATAAGCGACAA",12,141.59,6.03,-4.74,0.71,1.5,1.22,0.01,">1 nonsynonymous","G9D C61A P177V K199V",4
"lib1","SARS-CoV-2","AGAATATAATTCACGT",3,16.97,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20R S43F D97I",3
"lib1","SARS-CoV-2","AGAATATACCCAAATT",6,85.14,10.15,-0.61,0.06,2.81,1.05,0,">1 nonsynonymous","Y39N G152L F160S",3
"lib1","SARS-CoV-2","AGAATATACCCCAACC",7,103.25,10.67,-0.09,0.03,2.96,1,0,"1 nonsynonymous","S53F",1
"lib1","SARS-CoV-2","AGAATATACGTGGGAA",1,7.95,NA,NA,NA,NA,NA,NA,"stop","L95* S108Y Y121E",3
"lib1","SARS-CoV-2","AGAATATATAAATATC",1,14.78,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","L95S Y159V",2
"lib1","SARS-CoV-2","AGAATATATAGAAATA",1,14.24,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S139Y R179N",2
"lib1","SARS-CoV-2","AGAATATATGCTACAG",1,58.63,10.11,-0.65,0.11,2.75,1,0.01,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","AGAATATCAGTGCTAT",5,32.81,6.36,-4.41,0.58,1.5,1.21,0.03,">1 nonsynonymous","N1P R27G D98V S129L Q163K",5
"lib1","SARS-CoV-2","AGAATATCCAAATAGA",2,60.95,10.8,0.03,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAATATCTCCATTAC",7,78.48,8.37,-2.4,0.25,1.5,1.09,0.03,">1 nonsynonymous","I2L S19K N58I",3
"lib1","SARS-CoV-2","AGAATATGCCTATGGT",6,82.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K48M A81T Y91P",3
"lib1","SARS-CoV-2","AGAATATGTATACCGG",3,53.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L95M R124C E141Q",3
"lib1","SARS-CoV-2","AGAATATGTCCACCAA",1,28.84,10.79,0.02,0.09,2.98,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAATATTAACCAAAC",8,61.22,6.07,-4.7,0.35,1.5,1.12,0,">1 nonsynonymous","E10Q S36R G86L L122Y K198S",5
"lib1","SARS-CoV-2","AGAATATTATCTGATA",4,46.07,8.66,-2.11,0.11,2.52,1.13,0.01,">1 nonsynonymous","I104C N120P T148L",3
"lib1","SARS-CoV-2","AGAATATTCACACGCA",7,2.05,NA,NA,NA,NA,NA,NA,"stop","S19F L122* F156S",3
"lib1","SARS-CoV-2","AGAATATTGACTGACG",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V182P T201C",2
"lib1","SARS-CoV-2","AGAATATTGAGGTCCC",7,75.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T15S A42V F62A G83N S108F P133F P177S",7
"lib1","SARS-CoV-2","AGAATCAAAAGTTAAA",2,28.57,9.94,-0.83,0.12,1.83,1.07,0.01,">1 nonsynonymous","G51M C61D D98S",3
"lib1","SARS-CoV-2","AGAATCAAATATTCGA",1,9.44,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A33R A81S C102Y I142N Q163L V173K",6
"lib1","SARS-CoV-2","AGAATCAACAAAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1S V32S S45* A81S",4
"lib1","SARS-CoV-2","AGAATCAACCCAGCAG",2,113.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V11H N40K Y66C C150S P177M",5
"lib1","SARS-CoV-2","AGAATCAAGACCAGCA",2,41.51,10.32,-0.45,0.1,2.57,1.06,0,">1 nonsynonymous","L122V G152W",2
"lib1","SARS-CoV-2","AGAATCAATAAAAATC",6,297.04,9.09,-1.67,0.06,2.79,1.11,0,">1 nonsynonymous","T15H Y39Q T55S G174C",4
"lib1","SARS-CoV-2","AGAATCACCAACTAAC",7,37.53,9.92,-0.84,0.13,1.9,1.1,0.01,">1 nonsynonymous","S69M G83E",2
"lib1","SARS-CoV-2","AGAATCACGCCGAGCC",6,0.83,NA,NA,NA,NA,NA,NA,"stop","Y91* C150W",2
"lib1","SARS-CoV-2","AGAATCACTACTTACA",12,168.04,8.9,-1.86,0.1,1.96,1.11,0,">1 nonsynonymous","D97Y P161Q",2
"lib1","SARS-CoV-2","AGAATCAGACTCGTCC",2,73.06,9.98,-0.79,0.08,2.51,1.04,0,">1 nonsynonymous","E10G D97K S129M A192E",4
"lib1","SARS-CoV-2","AGAATCAGCTTAGAAC",10,192.56,10.57,-0.2,0.04,2.85,1.04,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","AGAATCAGGATAGTTA",6,106.86,10.2,-0.57,0.05,2.8,1.02,0,">1 nonsynonymous","N40K K48E N58Y",3
"lib1","SARS-CoV-2","AGAATCAGGTTGACTG",2,23.11,8.51,-2.25,0.29,1.72,1.01,0.03,">1 nonsynonymous","Y35F N107W",2
"lib1","SARS-CoV-2","AGAATCATATATATAT",1,25.43,9.22,-1.55,0.08,2.85,1.08,0,">1 nonsynonymous","I2N L125Y",2
"lib1","SARS-CoV-2","AGAATCATCACAGCAC",1,30.58,9.38,-1.38,0.17,1.84,1.13,0.01,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","AGAATCATGCACCAAA",2,21.6,6,-4.76,2,2.55,1.11,0,">1 nonsynonymous","I28K L183H",2
"lib1","SARS-CoV-2","AGAATCATTACCTAAG",3,56.46,10.19,-0.57,0.1,2.43,1.05,0,">1 nonsynonymous","D59I D98E",2
"lib1","SARS-CoV-2","AGAATCATTTTAGGAT",5,31.55,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","L5M V103P Y159S",3
"lib1","SARS-CoV-2","AGAATCCAAATACAGC",3,23.09,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37R A89R G117V S129V S139G G196R",6
"lib1","SARS-CoV-2","AGAATCCAATAGTAAA",3,77.66,7.97,-2.8,0.23,1.55,1.14,0.02,">1 nonsynonymous","L5R T55M D90F Y159V",4
"lib1","SARS-CoV-2","AGAATCCACCTGCCAT",2,97.38,8.27,-2.5,0.18,1.92,1.17,0.01,">1 nonsynonymous","F70M R78S S113C",3
"lib1","SARS-CoV-2","AGAATCCACGTTTTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G K56L",2
"lib1","SARS-CoV-2","AGAATCCAGCAGGCTA",1,63.1,10.77,0.01,0.06,2.91,1.03,0,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","AGAATCCAGGATGTGT",5,85.19,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6L F12C K48L F99S S129D",5
"lib1","SARS-CoV-2","AGAATCCAGTGTCACT",4,36.51,6.09,-4.67,0.56,1.5,1.12,0.01,">1 nonsynonymous","P7L S19T Y91H",3
"lib1","SARS-CoV-2","AGAATCCATTCTGTTA",7,45.24,8.57,-2.19,0.25,1.5,1.04,0.03,">1 nonsynonymous","T63V V77W L125M",3
"lib1","SARS-CoV-2","AGAATCCATTGTAATG",9,62.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T85A N107I Y121H",3
"lib1","SARS-CoV-2","AGAATCCCCGGACACG",3,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N G74D",2
"lib1","SARS-CoV-2","AGAATCCCTTGTTCTA",12,214.84,9.95,-0.82,0.08,2.46,1.03,0,">1 nonsynonymous","L5S R16Q K48F S147L P149Q",5
"lib1","SARS-CoV-2","AGAATCCGAGAACATT",9,131.58,10.78,0.02,0.09,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAATCCGCTGGAGAT",6,27.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7L N107P F156P G172R",4
"lib1","SARS-CoV-2","AGAATCCGTCGAGACG",1,9.49,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S129L P177L",2
"lib1","SARS-CoV-2","AGAATCCGTTTTAAAC",1,12.27,6.27,-4.49,0.48,3,1.2,0.01,">1 nonsynonymous","L95F F156C",2
"lib1","SARS-CoV-2","AGAATCCTAACAGGCT",7,52.15,7.99,-2.78,0.18,1.76,1.16,0.01,">1 nonsynonymous","V103I T140G Y175S",3
"lib1","SARS-CoV-2","AGAATCCTCGTCTCTA",2,31.05,6.13,-4.63,0.82,1.5,1.16,0.02,">1 nonsynonymous","F62V Y93R T100S",3
"lib1","SARS-CoV-2","AGAATCGACATGACCA",1,52.58,9.98,-0.78,0.07,2.68,1.05,0,">1 nonsynonymous","D98Y N120F Y143F",3
"lib1","SARS-CoV-2","AGAATCGACGGACAGG",8,116.54,9.71,-1.05,0.05,2.85,1.06,0,">1 nonsynonymous","Y121L T170S",2
"lib1","SARS-CoV-2","AGAATCGCACATGTAT",1,34.52,10.61,-0.16,0.07,2.86,1.05,0,"1 nonsynonymous","A22L",1
"lib1","SARS-CoV-2","AGAATCGCATACCGAG",1,13.18,10.25,-0.52,0.11,2.91,1,0.01,">1 nonsynonymous","L125G T140G",2
"lib1","SARS-CoV-2","AGAATCGGGGTAGGTG",2,17.48,7.61,-3.16,0.42,1.5,1,0.06,">1 nonsynonymous","A18K K94E F134R T201V",4
"lib1","SARS-CoV-2","AGAATCGTACGTTTGG",2,17.18,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","AGAATCTACTGCATAA",2,42.97,8.8,-1.97,0.11,2.77,1.12,0.01,">1 nonsynonymous","A105S Y119C K199I",3
"lib1","SARS-CoV-2","AGAATCTATAAACCCA",1,14.28,8.39,-2.38,0.16,2.58,1.29,0.02,">1 nonsynonymous","K26V Y66D N157Q",3
"lib1","SARS-CoV-2","AGAATCTATAATACAG",2,9.26,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","S36Y D112G P133V",3
"lib1","SARS-CoV-2","AGAATCTATAGAAAAA",4,0.12,NA,NA,NA,NA,NA,NA,"stop","G9Y D59V I80* V115F C158E",5
"lib1","SARS-CoV-2","AGAATCTCACAAAGAC",1,189.92,9.43,-1.33,0.07,2.76,1.1,0,">1 nonsynonymous","S113T N151F",2
"lib1","SARS-CoV-2","AGAATCTCATAATGCA",5,61.24,10.37,-0.4,0.05,2.93,1.02,0,">1 nonsynonymous","G9T L122R E154W",3
"lib1","SARS-CoV-2","AGAATCTCCCACGGAT",9,118.11,10.69,-0.07,0.07,2.88,1.04,0,">1 nonsynonymous","Y91N F160K",2
"lib1","SARS-CoV-2","AGAATCTCGAAATGCG",3,23.75,8.13,-2.63,0.27,1.69,1.1,0.02,">1 nonsynonymous","T46A K87S Y91S",3
"lib1","SARS-CoV-2","AGAATCTTAAGATTGT",2,37.71,10.71,-0.06,0.04,2.89,1.03,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","AGAATCTTCCAGGGGC",5,43.88,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N64V L95N",2
"lib1","SARS-CoV-2","AGAATCTTTATTCAAC",4,36.93,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I28V C49H T100V G174V",4
"lib1","SARS-CoV-2","AGAATCTTTGCAAAAG",4,16.28,10.04,-0.72,0.08,2.04,1.06,0,">1 nonsynonymous","D34N P133N",2
"lib1","SARS-CoV-2","AGAATGAAAGCACCGC",1,22.8,10.56,-0.2,0.06,2.88,1.08,0,">1 nonsynonymous","G9N G146W L188K",3
"lib1","SARS-CoV-2","AGAATGAACGAATAAT",4,37.6,10.56,-0.21,0.04,2.9,1.05,0,">1 nonsynonymous","Y91L N120D",2
"lib1","SARS-CoV-2","AGAATGAAGGCTCTTC",1,10.62,10.7,-0.06,0.15,2.85,1.05,0.01,">1 nonsynonymous","D90R K114R",2
"lib1","SARS-CoV-2","AGAATGAAGTTTAACG",7,0.42,NA,NA,NA,NA,NA,NA,"stop","P96* S164R",2
"lib1","SARS-CoV-2","AGAATGAATTCCGACA",7,67.79,6.4,-4.36,0.37,1.79,1.22,0.01,">1 nonsynonymous","F8C F62I Y121N",3
"lib1","SARS-CoV-2","AGAATGACAACCCTTA",4,65.6,6,-4.76,1.74,1.5,1.15,0.02,">1 nonsynonymous","S45L P96L V103Q Y123L Y143L P177E",6
"lib1","SARS-CoV-2","AGAATGACAGAATAAA",1,100.34,10.76,-0.01,0.08,2.92,1.03,0,"1 nonsynonymous","T15S",1
"lib1","SARS-CoV-2","AGAATGACTATTACAA",5,59.81,10.12,-0.64,0.05,2.87,1.03,0,">1 nonsynonymous","V115A S129L E186D A190D T201M",5
"lib1","SARS-CoV-2","AGAATGACTTTCGATG",1,14.55,10.45,-0.32,0.16,2.78,1.16,0.02,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","AGAATGAGGACGCGAT",3,1.5,NA,NA,NA,NA,NA,NA,"stop","G9H S45G N157*",3
"lib1","SARS-CoV-2","AGAATGAGGTTAAAAT",3,18.71,10.5,-0.26,0.04,2.96,1,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","AGAATGAGTGTGCAAA",3,63.23,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83P R127T",2
"lib1","SARS-CoV-2","AGAATGAGTTGGATAA",6,129.75,10.7,-0.07,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAATGATAATTTACC",1,5.61,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","I2T C49R N107Y P191S",4
"lib1","SARS-CoV-2","AGAATGATGCGACCAG",2,136.53,10.11,-0.65,0.05,2.84,1.04,0,">1 nonsynonymous","I142A S200L",2
"lib1","SARS-CoV-2","AGAATGATGTATTTTT",11,4.57,NA,NA,NA,NA,NA,NA,"stop","C49F C61F I104Y L122* E141V",5
"lib1","SARS-CoV-2","AGAATGCACCAATGGA",1,47.27,8.74,-2.02,0.09,2.95,1.09,0,">1 nonsynonymous","Y119H T170M",2
"lib1","SARS-CoV-2","AGAATGCATTAGCGAC",1,10.4,10.41,-0.35,0.22,2.46,1,0.02,">1 nonsynonymous","S69M G116P",2
"lib1","SARS-CoV-2","AGAATGCCACGCGCAA",7,91.79,6.34,-4.43,0.46,1.5,1.11,0.01,">1 nonsynonymous","A33E S43F C102L N118M A192E",5
"lib1","SARS-CoV-2","AGAATGCGCCTCAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14K S53T D59* K87S V103Y G146K",6
"lib1","SARS-CoV-2","AGAATGCGCGCATTAG",8,111.14,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","AGAATGCGGAACGCAT",2,17.49,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P82T T85R Y91V",3
"lib1","SARS-CoV-2","AGAATGCTCCAGCCAA",5,9.9,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","L5I A14I S129Q V182N",4
"lib1","SARS-CoV-2","AGAATGCTTCTCATTC",9,0.12,NA,NA,NA,NA,NA,NA,"stop","S43V P149Q F156*",3
"lib1","SARS-CoV-2","AGAATGGAAGCGCAGA",8,147.04,10.12,-0.65,0.06,2.59,1.03,0,">1 nonsynonymous","N1T L57Y V173I",3
"lib1","SARS-CoV-2","AGAATGGAAGGACACG",14,8.14,10.64,-0.13,0.31,2.32,1.14,0.04,">1 nonsynonymous","Q84I N92V K198G",3
"lib1","SARS-CoV-2","AGAATGGACTTTTCTG",2,19.61,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V32L Y93G R179M",3
"lib1","SARS-CoV-2","AGAATGGAGATATATG",5,61.69,8.56,-2.2,0.18,2.54,1.05,0.01,"1 nonsynonymous","N157W",1
"lib1","SARS-CoV-2","AGAATGGCCAAAGATC",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82K L122A C150F N171S Y178G E186G",6
"lib1","SARS-CoV-2","AGAATGGCCGTTAAGC",2,25.58,7.93,-2.83,0.13,2.53,1.06,0.01,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","AGAATGGCTACATCAA",4,35.1,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V37M T63I F99L G155L",4
"lib1","SARS-CoV-2","AGAATGGCTGGAAGCG",10,62.2,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D90Y T148S Y159A V173T",4
"lib1","SARS-CoV-2","AGAATGGGAAACATCA",2,69.93,10.29,-0.47,0.05,2.86,1.05,0,">1 nonsynonymous","A33V G51Q V77I",3
"lib1","SARS-CoV-2","AGAATGGGGACGCGAA",3,59.63,9.42,-1.34,0.13,1.77,1.04,0.01,">1 nonsynonymous","I2F N40T P133H C195W T201G",5
"lib1","SARS-CoV-2","AGAATGGGTAATTCCC",2,14.1,10.91,0.14,0.07,2.87,1.08,0,">1 nonsynonymous","V37S F44Y",2
"lib1","SARS-CoV-2","AGAATGGTACACACAA",3,10.7,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S29M D75G G86S Y93I N118D Q144S N157L",7
"lib1","SARS-CoV-2","AGAATGTAAACTGCGG",3,8.36,7.72,-3.04,0.19,2.35,1.03,0.02,">1 nonsynonymous","C6V I142K",2
"lib1","SARS-CoV-2","AGAATGTAAGTGCTAA",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y I80H G116R N157T G172A",5
"lib1","SARS-CoV-2","AGAATGTACAAAACTG",3,17.8,6.06,-4.71,1.22,1.5,1.25,0.03,">1 nonsynonymous","N107Q Y121I E135R Y143S E154M G155D",6
"lib1","SARS-CoV-2","AGAATGTACAGCACGC",3,6.69,9.88,-0.88,0.14,1.96,1.06,0,">1 nonsynonymous","V77L D90C D97G",3
"lib1","SARS-CoV-2","AGAATGTACCAAGAAA",3,41.17,10.74,-0.03,0.05,2.88,1.1,0,"1 nonsynonymous","F160D",1
"lib1","SARS-CoV-2","AGAATGTATTAGACCG",4,62.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y P82K K199L",3
"lib1","SARS-CoV-2","AGAATGTCAACTTAAG",3,45.98,6.22,-4.54,0.76,1.5,1.17,0.03,">1 nonsynonymous","G101I F160T",2
"lib1","SARS-CoV-2","AGAATGTCAAGGATTT",3,63.87,10.36,-0.4,0.05,2.84,1.08,0,">1 nonsynonymous","T3F K87V S129R C195S",4
"lib1","SARS-CoV-2","AGAATGTCCGCGATGA",3,42.37,10.75,-0.02,0.05,2.92,1.05,0,">1 nonsynonymous","S129D T148K",2
"lib1","SARS-CoV-2","AGAATGTTGGATATAG",5,28.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35L S53Y T55F G86P D98Q Y178D",6
"lib1","SARS-CoV-2","AGAATGTTTATTCAAA",6,45.23,NA,NA,NA,NA,NA,NA,"stop","N30K K87* T100L",3
"lib1","SARS-CoV-2","AGAATTAAACTGTAAA",1,2.27,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGAATTAAATATAAAC",5,2.93,NA,NA,NA,NA,NA,NA,"stop","F8* C49L N58Y",3
"lib1","SARS-CoV-2","AGAATTAAATGTATAG",4,3.87,NA,NA,NA,NA,NA,NA,"stop","Y39* C102I Y121G",3
"lib1","SARS-CoV-2","AGAATTAAATTATACG",4,52.88,9.97,-0.79,0.11,2.49,1.01,0.01,">1 nonsynonymous","I2T E10A R16P S41C",4
"lib1","SARS-CoV-2","AGAATTAACAAACTCC",6,59.37,6.65,-4.12,0.5,1.5,1.15,0.04,">1 nonsynonymous","T3V T46I D59S I80T Q144S Y159I",6
"lib1","SARS-CoV-2","AGAATTAACGAGTACC",2,19.21,6,-4.76,2,3,1.09,0.02,">1 nonsynonymous","V71T I80L D90T T140A",4
"lib1","SARS-CoV-2","AGAATTAACTCAAACA",1,8.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A81P Q144N C158V",3
"lib1","SARS-CoV-2","AGAATTAAGATCGCCA",4,25.56,9.99,-0.77,0.17,1.74,1.16,0.01,">1 nonsynonymous","A89M S147V",2
"lib1","SARS-CoV-2","AGAATTAATACCATAA",9,47.01,6,-4.76,1.1,1.5,1.15,0.01,">1 nonsynonymous","T3S D75N I88S",3
"lib1","SARS-CoV-2","AGAATTACAACTTACT",3,54.81,8.21,-2.55,0.27,1.5,1.14,0.03,">1 nonsynonymous","R73F T201Y",2
"lib1","SARS-CoV-2","AGAATTACAGATGTTA",1,23.07,10.72,-0.05,0.03,2.98,1,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","AGAATTACAGTAAAAT",1,10.65,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D34K N92T",2
"lib1","SARS-CoV-2","AGAATTACATATCCGT",7,16.58,7,-3.77,0.56,1.66,1.2,0.06,">1 nonsynonymous","E10G W23Y K87C D98I L122F E141H",6
"lib1","SARS-CoV-2","AGAATTAGATAATAAT",2,77.75,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","AGAATTAGGATACTTA",6,0.5,NA,NA,NA,NA,NA,NA,"stop","L5* R25* G86S V153E",4
"lib1","SARS-CoV-2","AGAATTAGTATGCCCG",5,44.8,6.42,-4.35,0.56,1.5,1.1,0.03,">1 nonsynonymous","G9C D68C Q144I",3
"lib1","SARS-CoV-2","AGAATTATATAGCTTA",3,39.21,10.86,0.1,0.08,2.97,1,0,">1 nonsynonymous","N1V G9Q",2
"lib1","SARS-CoV-2","AGAATTATATGCAGTA",4,41.97,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G146S F167V G174W",3
"lib1","SARS-CoV-2","AGAATTATTACACTGA",4,73.19,8.64,-2.12,0.18,1.89,1.12,0.01,">1 nonsynonymous","Q79N A145T P149G",3
"lib1","SARS-CoV-2","AGAATTATTGCTACCC",5,75.99,8.19,-2.58,0.13,2.55,1.08,0.01,">1 nonsynonymous","N58Y F126G",2
"lib1","SARS-CoV-2","AGAATTATTTTGGGTC",2,42.82,7.99,-2.78,0.25,1.5,1.05,0.02,">1 nonsynonymous","F47L C61N D68Y",3
"lib1","SARS-CoV-2","AGAATTCAAAAGTGGA",7,16.76,6.23,-4.53,0.52,1.61,1.19,0.01,">1 nonsynonymous","D34L K94D I104Y T201M",4
"lib1","SARS-CoV-2","AGAATTCAAATAGCAA",3,86.84,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N92F D97C C150S",3
"lib1","SARS-CoV-2","AGAATTCAAGGCGATA",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L G86N G146D",3
"lib1","SARS-CoV-2","AGAATTCATATCTTTA",2,7.17,10.76,0,0.12,2.78,1.1,0,"1 nonsynonymous","L187P",1
"lib1","SARS-CoV-2","AGAATTCATGTCAGCA",8,195.89,10.3,-0.46,0.05,2.85,1.04,0,">1 nonsynonymous","F62V K128A T148P",3
"lib1","SARS-CoV-2","AGAATTCATTTGAATA",5,29,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","L38S F99R V115M",3
"lib1","SARS-CoV-2","AGAATTCCACATAGTA",4,64.04,6.12,-4.64,0.44,1.5,1.11,0.01,">1 nonsynonymous","F12K V77D N107V L125V",4
"lib1","SARS-CoV-2","AGAATTCCGGATACTA",2,3.03,NA,NA,NA,NA,NA,NA,"stop","K56M P177*",2
"lib1","SARS-CoV-2","AGAATTCCTCAGATGT",7,129.29,10.59,-0.18,0.04,2.85,1.05,0,"1 nonsynonymous","T15N",1
"lib1","SARS-CoV-2","AGAATTCCTTAAAATA",3,56.67,6,-4.76,0.76,3,1.08,0,">1 nonsynonymous","R25C D90K N107T",3
"lib1","SARS-CoV-2","AGAATTCGTAATAAAA",9,128.83,10.76,0,0.07,2.89,1.05,0,">1 nonsynonymous","Y35L T46M P197V",3
"lib1","SARS-CoV-2","AGAATTCGTACGGTGT",5,46.94,6.85,-3.91,0.39,1.5,1.19,0.03,">1 nonsynonymous","R25G S139G",2
"lib1","SARS-CoV-2","AGAATTCTCTGGAGGC",3,16.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6S L60K A105L L162G",4
"lib1","SARS-CoV-2","AGAATTCTTCCCTGTG",3,25.24,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","P54V R78C L162G",3
"lib1","SARS-CoV-2","AGAATTGAAAATCGTA",1,15.45,7.26,-3.51,0.13,2.33,1.06,0,">1 nonsynonymous","G117Y L125N T148F",3
"lib1","SARS-CoV-2","AGAATTGAAAGGTAAG",2,55.54,10.65,-0.11,0.07,2.88,1.08,0,"1 nonsynonymous","V65L",1
"lib1","SARS-CoV-2","AGAATTGACAGATGCC",3,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S D34H N64T G83I T100S",5
"lib1","SARS-CoV-2","AGAATTGAGTACTCCT",3,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y A105C Y119V E141S Y165W",5
"lib1","SARS-CoV-2","AGAATTGATACACAGT",2,41.13,8.58,-2.18,0.11,2.54,1.09,0,">1 nonsynonymous","R25T Y119T",2
"lib1","SARS-CoV-2","AGAATTGATTTCAGAT",2,0.29,NA,NA,NA,NA,NA,NA,"stop","A42L T55D D68* Y93K Y165*",5
"lib1","SARS-CoV-2","AGAATTGCCATACAAA",3,35,10.2,-0.57,0.07,2.92,1.03,0,">1 nonsynonymous","T85I L122M S129N T170A",4
"lib1","SARS-CoV-2","AGAATTGCTAAGATCC",3,1.29,NA,NA,NA,NA,NA,NA,"stop","N120* T140L",2
"lib1","SARS-CoV-2","AGAATTGCTATTTCGG",6,10.74,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","G9Q P54Y L60P V103A P133L P177Y",6
"lib1","SARS-CoV-2","AGAATTGGCCTTACAC",2,78.38,10.71,-0.06,0.09,2.92,1.06,0,"1 nonsynonymous","T46I",1
"lib1","SARS-CoV-2","AGAATTGGCGACATAA",3,46.26,10.7,-0.06,0.07,2.83,1.12,0,">1 nonsynonymous","V153N T201M",2
"lib1","SARS-CoV-2","AGAATTGGGGAGTAAA",5,10.09,9.96,-0.8,0.08,2.35,1.02,0,"1 nonsynonymous","E76F",1
"lib1","SARS-CoV-2","AGAATTGTAACACGTG",5,92.54,8.71,-2.06,0.11,2.68,1.05,0.01,">1 nonsynonymous","Y66S N110L N157G",3
"lib1","SARS-CoV-2","AGAATTGTACTCATAA",6,35.26,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F70A K128V C158M",3
"lib1","SARS-CoV-2","AGAATTGTATGTGCCA",1,46.95,7.39,-3.37,0.26,1.5,1.12,0.02,">1 nonsynonymous","A22P S200Q",2
"lib1","SARS-CoV-2","AGAATTGTCACAAACC",14,191.26,10.74,-0.02,0.06,2.92,1.05,0,">1 nonsynonymous","P7D T63R P191R",3
"lib1","SARS-CoV-2","AGAATTGTCCAATTCT",4,0.5,NA,NA,NA,NA,NA,NA,"stop","F44Y Y91*",2
"lib1","SARS-CoV-2","AGAATTGTCCCCATGG",2,65.67,9.21,-1.55,0.11,2.64,1.08,0,">1 nonsynonymous","T3M C61G G146T",3
"lib1","SARS-CoV-2","AGAATTTAAGTGATCA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W A105R S139D S147K",4
"lib1","SARS-CoV-2","AGAATTTAGAAATTAA",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y D68L P169N T201Y",4
"lib1","SARS-CoV-2","AGAATTTAGAAATTGT",10,62.23,10.34,-0.42,0.07,2.87,1.01,0,">1 nonsynonymous","S41C S139H",2
"lib1","SARS-CoV-2","AGAATTTATCCCAATC",6,34.36,10.79,0.03,0.09,2.89,1.08,0,">1 nonsynonymous","K56H F160R",2
"lib1","SARS-CoV-2","AGAATTTATCTGAGCA",5,36.95,10.72,-0.05,0.05,2.9,1.05,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","AGAATTTCATTTAAAG",3,50.63,10.8,0.04,0.06,2.92,1.07,0,"1 nonsynonymous","D97H",1
"lib1","SARS-CoV-2","AGAATTTGACACCCAT",1,3.77,NA,NA,NA,NA,NA,NA,"stop","Y143S Y165*",2
"lib1","SARS-CoV-2","AGAATTTGCGAATCTG",5,29.57,10.33,-0.44,0.07,2.95,1,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","AGAATTTGTCTAATCC",2,38.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39S Y119H R124N E154R G172E",5
"lib1","SARS-CoV-2","AGAATTTTAAACTAAA",1,10.59,10.42,-0.35,0.09,2.81,1.09,0.01,">1 nonsynonymous","N64C K114I",2
"lib1","SARS-CoV-2","AGAATTTTAGCCTGAA",1,51.55,10.74,-0.02,0.08,2.86,1.03,0,">1 nonsynonymous","T55N D90N L122G L188I",4
"lib1","SARS-CoV-2","AGAATTTTTTGAAAAG",5,55.74,6,-4.76,1.43,3,1.13,0,">1 nonsynonymous","L5C W23A L38A G116V Q176M",5
"lib1","SARS-CoV-2","AGACAAAAAAAGCAAG",2,18.39,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5R T55N I88R",3
"lib1","SARS-CoV-2","AGACAAAAACAGGACA",2,32.65,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","A89V C150S Q176R V180I",4
"lib1","SARS-CoV-2","AGACAAAAAGAATTAA",1,11.63,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10S V71Y Q84L G101T Y121S G146P",6
"lib1","SARS-CoV-2","AGACAAAACAAGCCTG",2,46.95,10.43,-0.34,0.09,2.85,1.04,0,">1 nonsynonymous","P7S R16Y R136Q",3
"lib1","SARS-CoV-2","AGACAAAACAAGGACT",5,46.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90L F167P",2
"lib1","SARS-CoV-2","AGACAAAACATTTCTA",1,36.45,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R16S P96M N107K Y159E Q168L",5
"lib1","SARS-CoV-2","AGACAAAACGACCCTA",2,31.55,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y93H V115P Y121N",3
"lib1","SARS-CoV-2","AGACAAAACTAATCAG",2,31.98,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V37R S45V C61N D68T I142M G155S",6
"lib1","SARS-CoV-2","AGACAAAACTAGATAA",1,43.4,8.81,-1.96,0.12,2.64,1.16,0.01,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","AGACAAAACTCAAAAA",5,26.28,6.2,-4.56,0.76,1.5,1.17,0.03,">1 nonsynonymous","E10M V32L D90L I104A Y123A",5
"lib1","SARS-CoV-2","AGACAAAAGAAGATGT",1,5.05,NA,NA,NA,NA,NA,NA,"stop","S19T N64M N92E F99E K114V K128*",6
"lib1","SARS-CoV-2","AGACAAAAGTCCATGA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V37* F44V A89Y K132L T170S",5
"lib1","SARS-CoV-2","AGACAAAAGTTTAATC",9,28.6,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3I D98T Y123V E135I N151I",5
"lib1","SARS-CoV-2","AGACAAAATATGTTAC",1,38.68,10.73,-0.04,0.05,2.96,1.01,0,">1 nonsynonymous","S43V T63C L122V",3
"lib1","SARS-CoV-2","AGACAAAATCCTGCCT",3,35.5,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y143R Y178L",2
"lib1","SARS-CoV-2","AGACAAAATCGAGCAC",4,25.96,10.24,-0.52,0.08,2.75,1.04,0.01,">1 nonsynonymous","I2N Y35R",2
"lib1","SARS-CoV-2","AGACAAAATTATGGCA",2,24.73,7.18,-3.58,0.37,1.5,1.12,0.04,">1 nonsynonymous","F99V C158P Q168R K199N",4
"lib1","SARS-CoV-2","AGACAAAATTTATAAC",3,42.65,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S45L D98S R127K T148G Q176L",5
"lib1","SARS-CoV-2","AGACAAACAAAATCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37S S139V S184T P197S S200*",5
"lib1","SARS-CoV-2","AGACAAACAAAGTGCG",4,1.47,NA,NA,NA,NA,NA,NA,"stop","D59L G101* N110G G116H",4
"lib1","SARS-CoV-2","AGACAAACAATTCTGT",4,88.43,9.98,-0.78,0.06,2.44,1.02,0,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","AGACAAACCGCTGAGA",7,147.37,10.69,-0.08,0.07,2.81,1.11,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","AGACAAACCTGGCTAA",7,128.98,10.78,0.02,0.08,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACAAACGAACCGGA",3,6.8,6,-4.76,1.73,3,1.1,0.02,">1 nonsynonymous","V37P A89R L183K",3
"lib1","SARS-CoV-2","AGACAAACGCTTTAAG",2,13.09,9.7,-1.06,0.12,1.94,1.1,0,">1 nonsynonymous","N13F N58C S147D N151C",4
"lib1","SARS-CoV-2","AGACAAACGGTAAACC",1,10.85,9.28,-1.48,0.13,2.8,1.17,0,"1 nonsynonymous","Y119D",1
"lib1","SARS-CoV-2","AGACAAAGCAGAGGAT",3,6.66,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F8A F99L C102S",3
"lib1","SARS-CoV-2","AGACAAATAAGGGCTG",2,5.2,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C102S S113I E141H F156L",4
"lib1","SARS-CoV-2","AGACAAATAGACAACA",2,46.62,10.8,0.04,0.1,2.92,1,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","AGACAAATAGGAGTAA",5,0.61,NA,NA,NA,NA,NA,NA,"stop","F17N Y93T V115P E135* F156*",5
"lib1","SARS-CoV-2","AGACAAATCGAATGGC",6,71.83,10.44,-0.33,0.06,2.92,1.03,0,">1 nonsynonymous","Q84V Y121F",2
"lib1","SARS-CoV-2","AGACAAATTCTGTGAA",3,23.88,10.66,-0.1,0.1,2.9,1.07,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","AGACAAATTTTTCCTA",7,163.25,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","AGACAACAACACTTGG",4,28.58,8.82,-1.95,0.25,1.5,1.24,0.03,">1 nonsynonymous","W23C S129M",2
"lib1","SARS-CoV-2","AGACAACAACGTGTTA",8,70.71,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","AGACAACACACAAATT",6,20.73,6.05,-4.71,0.98,1.5,1.22,0.02,">1 nonsynonymous","W23V D90L D98T P169Y K199S",5
"lib1","SARS-CoV-2","AGACAACAGCGCACCT",2,41.97,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","K56L L95N I138G N151Y N157S",5
"lib1","SARS-CoV-2","AGACAACATCAGGATA",1,11.27,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56G Y66W G86R V115K N130S",5
"lib1","SARS-CoV-2","AGACAACCATCATAGC",5,86.29,8.11,-2.65,0.26,1.5,1.17,0.02,">1 nonsynonymous","E135T Q176L",2
"lib1","SARS-CoV-2","AGACAACCCAAGGTTA",2,26.55,10.22,-0.54,0.09,2.7,1.08,0,">1 nonsynonymous","V52F F62G",2
"lib1","SARS-CoV-2","AGACAACCCCGCCATA",7,90.24,10.82,0.06,0.1,2.85,1.08,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","AGACAACGAATCACGG",2,2.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40H",1
"lib1","SARS-CoV-2","AGACAACGCAGTAGGA",8,4.41,NA,NA,NA,NA,NA,NA,"stop","L5F Y35* A42P K56L C102W",5
"lib1","SARS-CoV-2","AGACAACTCAAAAAGT",7,99.77,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23L N30F",2
"lib1","SARS-CoV-2","AGACAACTCCAGAGTT",10,105.31,8.72,-2.04,0.25,1.5,1.05,0.03,">1 nonsynonymous","T3L F12P",2
"lib1","SARS-CoV-2","AGACAACTTATCACGG",2,74.86,9.51,-1.26,0.18,1.69,1.11,0.01,">1 nonsynonymous","I28E G51N D97L T193Y V194G",5
"lib1","SARS-CoV-2","AGACAAGAACCTACAA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y W106P T148A",3
"lib1","SARS-CoV-2","AGACAAGAACTCCTCT",6,9.64,6,-4.76,1.57,3,1.2,0.01,">1 nonsynonymous","V103G Y165M",2
"lib1","SARS-CoV-2","AGACAAGAAGCACGTT",3,1.63,NA,NA,NA,NA,NA,NA,"stop","G101* G116Y G152F Y159I",4
"lib1","SARS-CoV-2","AGACAAGATAGTACCA",4,73.89,10.11,-0.66,0.09,2.48,1.02,0,">1 nonsynonymous","I2R T55P D98V",3
"lib1","SARS-CoV-2","AGACAAGATGAAAAAC",1,1.59,NA,NA,NA,NA,NA,NA,"stop","W23S F156*",2
"lib1","SARS-CoV-2","AGACAAGCATAGAAAT",4,2.66,NA,NA,NA,NA,NA,NA,"stop","E141* T201M",2
"lib1","SARS-CoV-2","AGACAAGCGGAATTTA",5,4.59,NA,NA,NA,NA,NA,NA,"stop","K87D N120E E135*",3
"lib1","SARS-CoV-2","AGACAAGCGGCATCAA",3,73.36,10.44,-0.33,0.06,2.9,1.03,0,">1 nonsynonymous","C61G T85K",2
"lib1","SARS-CoV-2","AGACAAGCTTAAACGT",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R A105S P149F",3
"lib1","SARS-CoV-2","AGACAAGCTTAAATCA",3,6.86,NA,NA,NA,NA,NA,NA,"stop","A18E V37L G172*",3
"lib1","SARS-CoV-2","AGACAAGGTTAAACTA",1,23.98,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","R25L A33P A42D V71Q P161D",5
"lib1","SARS-CoV-2","AGACAAGTTCTAACAC",1,32.69,8.57,-2.19,0.12,2.52,1.07,0,">1 nonsynonymous","K114P E141R F160P",3
"lib1","SARS-CoV-2","AGACAATAACACGATA",5,8.01,NA,NA,NA,NA,NA,0.44,">1 nonsynonymous","A14R N92I",2
"lib1","SARS-CoV-2","AGACAATAAGAATAAC",1,30.07,9.43,-1.34,0.2,1.58,1.21,0.02,">1 nonsynonymous","T3M Y35H F62P",3
"lib1","SARS-CoV-2","AGACAATACTTGTCAT",2,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I C61G",2
"lib1","SARS-CoV-2","AGACAATAGATTATAT",3,62.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40E C49R S113I G152F",4
"lib1","SARS-CoV-2","AGACAATAGTACACAG",7,1.47,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","AGACAATATATTACAG",15,136.98,10.85,0.09,0.06,2.91,1.04,0,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","AGACAATATTCACTTC",1,13.41,6,-4.76,2,2.16,1.13,0,">1 nonsynonymous","C61S G86N D97L S139V",4
"lib1","SARS-CoV-2","AGACAATCCCAACCTA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","T15* N58S V180S",3
"lib1","SARS-CoV-2","AGACAATCCTGGAAAT",12,107.69,10.71,-0.05,0.05,2.87,1.07,0,"1 nonsynonymous","S53R",1
"lib1","SARS-CoV-2","AGACAATCTCTCGATA",11,5.07,NA,NA,NA,NA,NA,NA,"stop","Y21Q K56N V65F K128* F160L",5
"lib1","SARS-CoV-2","AGACAATGATCTGTAC",1,67.97,10.58,-0.19,0.06,2.87,1.04,0,">1 nonsynonymous","R27T F185L",2
"lib1","SARS-CoV-2","AGACAATGCTAACGTA",5,38.66,8.05,-2.72,0.42,1.5,1,0.07,">1 nonsynonymous","P161V P169Q",2
"lib1","SARS-CoV-2","AGACAATTTAATCAAT",1,49.16,9.89,-0.88,0.07,2.69,1.04,0,">1 nonsynonymous","L60Y Y165W",2
"lib1","SARS-CoV-2","AGACACAAATTAGCAA",4,84.32,10.71,-0.06,0.06,2.86,1.1,0,"1 nonsynonymous","C61Q",1
"lib1","SARS-CoV-2","AGACACAACGTCACAC",8,95.24,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I72R T100S",2
"lib1","SARS-CoV-2","AGACACAATCAAATCA",8,173.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9S G86E E186C",3
"lib1","SARS-CoV-2","AGACACACATCGAACC",6,103.62,9.1,-1.67,0.14,1.69,1.1,0.01,">1 nonsynonymous","C61R P82L G174N",3
"lib1","SARS-CoV-2","AGACACACATCGGGAC",5,0.41,NA,NA,NA,NA,NA,NA,"stop","R16V S43I I72*",3
"lib1","SARS-CoV-2","AGACACACGATATCGA",3,70.75,10.75,-0.02,0.06,2.91,1.06,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","AGACACAGAAATACGC",1,21.88,8.54,-2.23,0.18,1.64,1.14,0.02,">1 nonsynonymous","T3S S36H G86N",3
"lib1","SARS-CoV-2","AGACACATATTTTACG",3,16.06,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G86P K94W V103Q A190E P197Y",5
"lib1","SARS-CoV-2","AGACACATGCGCTCCA",2,13.06,10.27,-0.5,0.13,2.96,1,0.03,">1 nonsynonymous","C61R F156V",2
"lib1","SARS-CoV-2","AGACACATTCCGTATT",2,15.76,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S19V S113L N118C",3
"lib1","SARS-CoV-2","AGACACCAAAGTTAAT",3,11.63,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3S N30W N92Q T100P T170I",5
"lib1","SARS-CoV-2","AGACACCAACTAAATC",5,0.67,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib1","SARS-CoV-2","AGACACCAGAGTCACA",10,3.07,NA,NA,NA,NA,NA,NA,"stop","F17T G51L C61* N151F",4
"lib1","SARS-CoV-2","AGACACCATCTCTCAA",7,129.58,10.76,-0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACACCCACTCCATT",6,74.9,8.56,-2.21,0.14,1.95,1.14,0.01,">1 nonsynonymous","L60R Q79S Y119R",3
"lib1","SARS-CoV-2","AGACACCCCACCTCGT",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W K56P I80W K128L N171I",5
"lib1","SARS-CoV-2","AGACACCCGAATGGGC",4,49.6,6.23,-4.53,0.77,1.5,1.17,0.02,">1 nonsynonymous","P82K R136C",2
"lib1","SARS-CoV-2","AGACACCCGCGATTGT",2,28.17,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","L60S N118R Y175T",3
"lib1","SARS-CoV-2","AGACACCCTGACAGAA",1,40.44,10.75,-0.01,0.1,2.79,1.1,0,"1 nonsynonymous","T201G",1
"lib1","SARS-CoV-2","AGACACCGAGAAAAAG",4,117.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9S D68R Y175K",3
"lib1","SARS-CoV-2","AGACACCGTAGGAGTA",3,56.7,10.09,-0.67,0.12,1.73,1.1,0.01,">1 nonsynonymous","I2M P82L",2
"lib1","SARS-CoV-2","AGACACGAAGCCTTAA",6,159,9.96,-0.81,0.08,2.58,1.03,0,">1 nonsynonymous","N107P S139R",2
"lib1","SARS-CoV-2","AGACACGATGCCTGAA",4,41.06,10.08,-0.68,0.09,2.69,1.03,0,">1 nonsynonymous","N4L Y123M V153S",3
"lib1","SARS-CoV-2","AGACACGCCGCTCGAT",3,108.97,10.17,-0.59,0.05,2.8,1.03,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","AGACACGCGGGAATAT",1,36.31,10.68,-0.08,0.06,2.92,1.07,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","AGACACGGGATGTATT",4,24.45,6.82,-3.95,0.83,1.5,1.22,0.08,">1 nonsynonymous","A33N F44V G116R G155L T170S",5
"lib1","SARS-CoV-2","AGACACGTACCTCCTA",5,15.17,6.48,-4.29,1.44,1.5,1.18,0.03,">1 nonsynonymous","I28Q I72Q I138L Y165R",4
"lib1","SARS-CoV-2","AGACACGTACGTAAAA",3,30.5,10.66,-0.11,0.07,2.88,1,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","AGACACGTATAAGACG",1,17.6,7.5,-3.26,0.41,1.5,1.13,0.06,">1 nonsynonymous","F8G T15I T55L N118S",4
"lib1","SARS-CoV-2","AGACACGTTCTGCGCA",1,14.2,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N40L F70I",2
"lib1","SARS-CoV-2","AGACACTAAGTAGGAC",4,41.34,10.22,-0.54,0.09,2.69,1,0.01,">1 nonsynonymous","N40E Y165F",2
"lib1","SARS-CoV-2","AGACACTACATTTATA",2,80.35,9.12,-1.65,0.12,2.03,1.09,0.01,">1 nonsynonymous","C6W T55L T85M L122M P169R",5
"lib1","SARS-CoV-2","AGACACTATACAAACA",10,1.13,NA,NA,NA,NA,NA,NA,"stop","L57P Y91*",2
"lib1","SARS-CoV-2","AGACACTGGCTAGTAA",5,28.12,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N24W F126S P177R",3
"lib1","SARS-CoV-2","AGACACTTATTACTCA",1,40.45,10.09,-0.67,0.09,2.79,1.02,0,">1 nonsynonymous","C6G F44Y",2
"lib1","SARS-CoV-2","AGACACTTCGTGTAGC",10,5.12,NA,NA,NA,NA,NA,NA,"stop","F62P I88M Y91H N151* F156P",5
"lib1","SARS-CoV-2","AGACACTTGATGCAGA",1,27.53,10.7,-0.07,0.05,2.87,1.05,0,"1 nonsynonymous","Y121H",1
"lib1","SARS-CoV-2","AGACACTTGTAAACAT",5,62.64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12H G86D T100V V153Y",4
"lib1","SARS-CoV-2","AGACACTTTAGCCTGC",1,1.73,NA,NA,NA,NA,NA,NA,"stop","R73W I88* P96T L122E",4
"lib1","SARS-CoV-2","AGACAGAAGCATAAGT",1,50.5,10.33,-0.43,0.07,2.91,1,0,">1 nonsynonymous","L5K I104T",2
"lib1","SARS-CoV-2","AGACAGAATTTTATCA",3,27.67,10.62,-0.15,0.19,2.73,1.07,0.04,"1 nonsynonymous","T148D",1
"lib1","SARS-CoV-2","AGACAGACCATCACAA",2,8.37,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6W T100N N157I",3
"lib1","SARS-CoV-2","AGACAGACCTATAAGT",2,59.5,8.55,-2.21,0.15,2.49,1.11,0.01,">1 nonsynonymous","A33L S113M F160R",3
"lib1","SARS-CoV-2","AGACAGACGGAGCATG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","I2S V52I L95T R124N G146V F167*",6
"lib1","SARS-CoV-2","AGACAGATCAAACTAT",9,115.14,10.68,-0.08,0.05,2.85,1.07,0,">1 nonsynonymous","S43V D90A N120Q",3
"lib1","SARS-CoV-2","AGACAGATGCAAGCTA",1,16.56,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","V20W C49L I88V N110T G146S F160S",6
"lib1","SARS-CoV-2","AGACAGATGCCGTTTT",1,37.27,8.52,-2.24,0.44,1.5,1,0.07,">1 nonsynonymous","R25F S129N",2
"lib1","SARS-CoV-2","AGACAGATTCCCCTAT",3,69.06,10.13,-0.64,0.06,2.24,1.01,0,">1 nonsynonymous","W106R A192L",2
"lib1","SARS-CoV-2","AGACAGATTGTTCATC",2,129.59,10.78,0.01,0.06,2.93,1.03,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","AGACAGCCGGCATTTG",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H S19K K56L D98F N107Y N118S",6
"lib1","SARS-CoV-2","AGACAGCCTTACTATG",7,41.8,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N13H N92T",2
"lib1","SARS-CoV-2","AGACAGCGGTTCCATT",8,107.04,10.84,0.08,0.09,2.88,1.03,0,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","AGACAGCTAAAATAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K A89Q Y119S G174Y",4
"lib1","SARS-CoV-2","AGACAGCTAACTACCT",1,15.2,10.13,-0.64,0.13,2.8,1,0.01,">1 nonsynonymous","F44P Y66N",2
"lib1","SARS-CoV-2","AGACAGCTATAGTAGC",4,428.86,10.7,-0.06,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACAGCTATCGTCCA",2,79.21,10.72,-0.05,0.06,2.93,1.03,0,"1 nonsynonymous","A190L",1
"lib1","SARS-CoV-2","AGACAGCTGGTAACGA",3,0,NA,NA,NA,NA,NA,NA,"stop","S41* C49I",2
"lib1","SARS-CoV-2","AGACAGGATGTACTTT",10,47.97,7.45,-3.31,0.31,1.5,1.11,0.03,">1 nonsynonymous","N40S S53R A89H Q168M",4
"lib1","SARS-CoV-2","AGACAGGCACTCCGAT",4,70.5,10.69,-0.07,0.04,2.87,1.05,0,">1 nonsynonymous","D90L S184T",2
"lib1","SARS-CoV-2","AGACAGGCAGTTTTAA",7,69.01,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15L R127I",2
"lib1","SARS-CoV-2","AGACAGGCCACGTGGG",8,74.09,9.69,-1.07,0.12,1.84,1.09,0,">1 nonsynonymous","P96C N130H P149S Q168R",4
"lib1","SARS-CoV-2","AGACAGTACAAGGACC",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58T A89N N107H",3
"lib1","SARS-CoV-2","AGACAGTAGGTAAAAA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","G51D Y93D V181*",3
"lib1","SARS-CoV-2","AGACAGTATTAAGCCA",10,57.07,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","I88E",1
"lib1","SARS-CoV-2","AGACAGTTAAGGAACC",16,201.06,10.66,-0.11,0.05,2.9,1.04,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","AGACAGTTCTCTACCC",4,34.53,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","L95S G146V",2
"lib1","SARS-CoV-2","AGACAGTTGCACCGCC",4,60.47,10.66,-0.11,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACAGTTTCGGGTTC",5,15.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F70V G116Q G172S",3
"lib1","SARS-CoV-2","AGACAGTTTGATGGTA",1,15.42,7.74,-3.03,0.18,1.75,1.11,0.01,">1 nonsynonymous","G9V T15R N120L G174V T201N",5
"lib1","SARS-CoV-2","AGACATAAAAAATGGA",3,17.47,6.12,-4.64,0.55,1.5,1.11,0.01,">1 nonsynonymous","F44K D98T D137A G166S",4
"lib1","SARS-CoV-2","AGACATAAAACAATGT",2,59.12,9.97,-0.79,0.1,2.18,1.02,0,">1 nonsynonymous","S19R K48R T63N",3
"lib1","SARS-CoV-2","AGACATAAATAAGGAA",5,25.86,9.57,-1.19,0.09,2.65,1.11,0,"1 nonsynonymous","Y121P",1
"lib1","SARS-CoV-2","AGACATAATCTGACGT",6,11.08,10.05,-0.71,0.13,2,1.12,0.01,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","AGACATACAACACGAC",3,1.69,NA,NA,NA,NA,NA,NA,"stop","R16M P82K F99L A105L K128* N157P",6
"lib1","SARS-CoV-2","AGACATACACGTCCAT",3,108.16,10.27,-0.49,0.05,2.88,1,0,">1 nonsynonymous","F8V K56Q",2
"lib1","SARS-CoV-2","AGACATACAGTTGACG",3,18.59,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86W R136L",2
"lib1","SARS-CoV-2","AGACATACGGTTCGAT",8,32.86,9.35,-1.41,0.26,1.5,1.14,0.03,">1 nonsynonymous","S29R S41F N64M A81S P96S",5
"lib1","SARS-CoV-2","AGACATAGGAAAAACG",4,47.71,10.75,-0.01,0.08,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACATAGGAGGGCAA",6,95.62,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N157L G172C Q176W T201Q",4
"lib1","SARS-CoV-2","AGACATAGTCTCGGCA",5,57.66,10.51,-0.26,0.06,2.91,1.04,0,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","AGACATATATACATCC",1,45.57,10.06,-0.71,0.07,2.93,1,0,">1 nonsynonymous","N4Q F126H",2
"lib1","SARS-CoV-2","AGACATATATTTAATT",3,19.82,6.77,-3.99,0.23,1.52,1.06,0.01,">1 nonsynonymous","N24L C31L D90S L95S A105S F160S",6
"lib1","SARS-CoV-2","AGACATATGACACCGT",6,23.32,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","V11F N13G S41T I104L P161L",5
"lib1","SARS-CoV-2","AGACATATGCGACTTT",4,1.65,NA,NA,NA,NA,NA,NA,"stop","Y39E Y165*",2
"lib1","SARS-CoV-2","AGACATATTGTAGTCG",2,7.76,10.4,-0.36,0.11,3,1.03,0.01,">1 nonsynonymous","K114L L122W",2
"lib1","SARS-CoV-2","AGACATCAAAGACACA",2,56.47,10.78,0.02,0.07,2.91,1.07,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","AGACATCAAGATGTCA",2,68.93,8.47,-2.3,0.08,2.36,1.11,0,"1 nonsynonymous","Q176V",1
"lib1","SARS-CoV-2","AGACATCACCAGCGAA",1,19.4,9.64,-1.13,0.21,2.18,1.09,0.01,">1 nonsynonymous","P82V G116E",2
"lib1","SARS-CoV-2","AGACATCACCATCATT",16,41.67,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","D59I V103S V173H",3
"lib1","SARS-CoV-2","AGACATCAGGCCCTCG",4,1.66,NA,NA,NA,NA,NA,NA,"stop","S41* L60H A81I T140N",4
"lib1","SARS-CoV-2","AGACATCAGGCTTTAA",1,120.01,10.75,-0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACATCATAGACGCT",10,100.72,10.8,0.04,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACATCATGTTTACT",3,83.81,10.04,-0.72,0.12,1.99,1.04,0.01,">1 nonsynonymous","F99H S129A",2
"lib1","SARS-CoV-2","AGACATCATTGATTAG",3,21.53,6,-4.76,1.96,1.5,1.15,0.01,">1 nonsynonymous","A14L V20M S45T L57F I142S",5
"lib1","SARS-CoV-2","AGACATCCAGAGTCGC",4,9.49,6.02,-4.74,1.75,3,1.24,0.01,">1 nonsynonymous","A14W Y121D R136K",3
"lib1","SARS-CoV-2","AGACATCTACTGATTT",3,28.9,8.37,-2.4,0.15,1.86,1.12,0.01,">1 nonsynonymous","N130M Y175L G196Q",3
"lib1","SARS-CoV-2","AGACATCTACTTATTG",3,8.54,NA,NA,NA,NA,NA,NA,"stop","A22* D97T S147T G155I",4
"lib1","SARS-CoV-2","AGACATCTCACGCCGA",5,24.23,10.49,-0.28,0.04,2.9,1.03,0,">1 nonsynonymous","F62K G196V",2
"lib1","SARS-CoV-2","AGACATCTCTGAAATG",6,79.13,10.61,-0.16,0.04,2.94,1.04,0,">1 nonsynonymous","S41R T85S",2
"lib1","SARS-CoV-2","AGACATGACAAAAACT",2,79.51,7.98,-2.78,0.21,1.5,1.27,0.02,">1 nonsynonymous","F44V E76S F156M",3
"lib1","SARS-CoV-2","AGACATGCATACTTAT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L5* S45L D68Q Q176S",4
"lib1","SARS-CoV-2","AGACATGGAAACTAAA",4,8.62,10.1,-0.67,0.31,2.37,1.01,0.06,">1 nonsynonymous","K48Y N64C G83K",3
"lib1","SARS-CoV-2","AGACATGGATAAAATT",4,59.88,6.29,-4.47,0.51,1.5,1.16,0.02,">1 nonsynonymous","N40A S129R C150V",3
"lib1","SARS-CoV-2","AGACATGGATTGGAAC",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81G K114R I142S G166C A190V",5
"lib1","SARS-CoV-2","AGACATGGTTACGTAT",2,27.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2G V180S",2
"lib1","SARS-CoV-2","AGACATGGTTACTTCT",3,32.84,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","E10S C49S N58S D90M W106K Y119G",6
"lib1","SARS-CoV-2","AGACATGTCCCGCGGT",3,5.12,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L5E L38T S45R D75N G86T D90P V181S",7
"lib1","SARS-CoV-2","AGACATGTTAAATCTT",1,54.61,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5G V11E R27A N157Y",4
"lib1","SARS-CoV-2","AGACATTAAAAGAATA",1,44.56,6.71,-4.06,0.45,1.5,1.17,0.03,">1 nonsynonymous","A89R L95M",2
"lib1","SARS-CoV-2","AGACATTAACTTCTAA",1,27.59,8.36,-2.4,0.1,2.36,1.11,0,">1 nonsynonymous","E10S I142G",2
"lib1","SARS-CoV-2","AGACATTAATTTTAAA",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P S45F I104G R127I",4
"lib1","SARS-CoV-2","AGACATTACCCAAACC",1,66.37,8.39,-2.38,0.19,2.66,1.14,0.01,">1 nonsynonymous","I2L N157Y",2
"lib1","SARS-CoV-2","AGACATTAGACGAGAC",10,23.94,6.59,-4.17,0.64,1.5,1.15,0.05,">1 nonsynonymous","S41L C49N N109P G146W",4
"lib1","SARS-CoV-2","AGACATTCGATACCAA",5,33.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7L L60Q Y66H Y91I G152S",5
"lib1","SARS-CoV-2","AGACATTCGGCTGTAG",6,18.71,NA,NA,NA,NA,NA,NA,"stop","E10* Y35L Y175E",3
"lib1","SARS-CoV-2","AGACATTCTATACCTA",3,43.25,10.8,0.04,0.07,2.88,1.11,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","AGACATTGAATTACGT",1,82.22,10.78,0.01,0.04,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACATTGCATTAAAC",8,106.89,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T46I A67S Y121A E141Q",4
"lib1","SARS-CoV-2","AGACATTTAACTAGGG",1,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L P82V G86T",3
"lib1","SARS-CoV-2","AGACATTTATAGGCTG",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E S36Y I88D",3
"lib1","SARS-CoV-2","AGACATTTCTATGAAA",7,68.94,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","W23E P54G R73A",3
"lib1","SARS-CoV-2","AGACATTTGATTGATA",2,40.18,6.15,-4.61,0.75,1.5,1.22,0.01,">1 nonsynonymous","R25V F44D I138Y",3
"lib1","SARS-CoV-2","AGACCAAAAGTCATTA",9,149.54,10.71,-0.06,0.05,2.9,1.04,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","AGACCAAACAAAGGAA",1,34.58,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","P7Y D112S T148I Q176S T201V",5
"lib1","SARS-CoV-2","AGACCAAACAAGATAC",2,44.98,10.5,-0.26,0.07,2.85,1,0,">1 nonsynonymous","P96A E141D",2
"lib1","SARS-CoV-2","AGACCAAACCTTAACG",4,40.82,10.74,-0.02,0.07,2.87,1.06,0,"1 nonsynonymous","F99W",1
"lib1","SARS-CoV-2","AGACCAAAGCGAGAAA",2,49.52,9.95,-0.81,0.11,1.91,1.04,0.01,">1 nonsynonymous","T3K S19R T100L",3
"lib1","SARS-CoV-2","AGACCAAATTAAACGT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","A14V Y21* I28Q D68* F134C",5
"lib1","SARS-CoV-2","AGACCAACATATGATG",3,45.69,10.73,-0.04,0.12,2.81,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGACCAAGAAAGTACG",3,98.59,9.96,-0.81,0.09,2.66,1,0,">1 nonsynonymous","K87C V115D E141Q",3
"lib1","SARS-CoV-2","AGACCAAGATGCGTGC",2,15.9,10.64,-0.12,0.07,2.91,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AGACCAAGGAAAAAAC",10,54.1,8.52,-2.25,0.26,1.5,1.08,0.02,"1 nonsynonymous","R179V",1
"lib1","SARS-CoV-2","AGACCAATAAAAAACC",6,104.44,10.64,-0.12,0.05,2.92,1.02,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","AGACCAATAAAATGCA",1,12.38,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T100S V103R",2
"lib1","SARS-CoV-2","AGACCAATTCCGTGGG",1,82.82,8.4,-2.36,0.17,1.5,1.17,0.01,">1 nonsynonymous","R27L Y178I S184K G196A",4
"lib1","SARS-CoV-2","AGACCACAAACTGTGC",5,97.34,10.82,0.06,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCACAACGCCTTG",2,45.61,10.69,-0.07,0.08,2.87,1.09,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","AGACCACAATTAATTG",3,36.73,9.13,-1.63,0.17,1.62,1.11,0.01,">1 nonsynonymous","P7E D98Y S139F",3
"lib1","SARS-CoV-2","AGACCACATAAGTGAC",3,33.1,9.52,-1.24,0.07,2.79,1.12,0,">1 nonsynonymous","C61V K87D",2
"lib1","SARS-CoV-2","AGACCACATTTCTAGC",1,8.6,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","V71Y A81P G86R",3
"lib1","SARS-CoV-2","AGACCACCTGTTTATG",15,290.61,10.17,-0.6,0.04,2.68,1.03,0,"1 nonsynonymous","S69R",1
"lib1","SARS-CoV-2","AGACCACGCATGATTG",6,72.97,10.22,-0.54,0.06,2.85,1.01,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","AGACCACGGGTAGAGA",1,71.98,6,-4.76,1.63,1.5,1.12,0,">1 nonsynonymous","V32T C49E L57G N64R A89L F134K",6
"lib1","SARS-CoV-2","AGACCACGTTACCTAC",8,13.61,7.21,-3.55,0.38,1.5,1,0.06,">1 nonsynonymous","D34Y L57F F70V",3
"lib1","SARS-CoV-2","AGACCACTATGTCGTA",5,64.73,9.23,-1.53,0.07,2.75,1.17,0,">1 nonsynonymous","N4W Y119N",2
"lib1","SARS-CoV-2","AGACCAGAAAACAAGC",5,42.88,6.81,-3.96,0.33,1.5,1.21,0.02,">1 nonsynonymous","K56D I88N S147H Q168H",4
"lib1","SARS-CoV-2","AGACCAGAGAAACGTT",6,43.73,10.84,0.07,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCAGAGCCATAAA",13,77.65,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A33L G86S Y143L F185R",4
"lib1","SARS-CoV-2","AGACCAGGCCCGTTGG",12,163.16,10.69,-0.07,0.03,2.9,1.04,0,">1 nonsynonymous","T55E K132A V173G A190E",4
"lib1","SARS-CoV-2","AGACCAGGGATGAACT",6,51.39,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","AGACCAGGTTCACGCA",3,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D K87L K94P",3
"lib1","SARS-CoV-2","AGACCAGTCCTATCGT",1,28.78,10.79,0.02,0.11,2.91,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGACCATAAGACCTGA",4,21.43,9.84,-0.92,0.17,1.81,1.06,0.01,">1 nonsynonymous","T15N Y121Q K128I S184Y K199H",5
"lib1","SARS-CoV-2","AGACCATACCACAGTG",9,120.15,8.35,-2.41,0.12,2.39,1.1,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","AGACCATACCTTGCAT",2,28.99,9.18,-1.58,0.16,2.03,1.18,0.01,"1 nonsynonymous","L131A",1
"lib1","SARS-CoV-2","AGACCATAGGATCTCC",4,171.3,9.67,-1.09,0.08,2.06,1.06,0,">1 nonsynonymous","V11G A18E V37A",3
"lib1","SARS-CoV-2","AGACCATATGTCCATA",5,34.89,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A18E Y39H N107M V115F",4
"lib1","SARS-CoV-2","AGACCATATTAAATGT",6,114.01,8.83,-1.94,0.11,1.94,1.12,0,">1 nonsynonymous","N118L F185Y",2
"lib1","SARS-CoV-2","AGACCATCACATGCCT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","L5V L60R D90E S113T A192*",5
"lib1","SARS-CoV-2","AGACCATCATGCCTGT",3,16.88,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A42V L60M L95M L131P G152A",5
"lib1","SARS-CoV-2","AGACCATCCACCACCA",7,85.78,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N4R D68L N130C",3
"lib1","SARS-CoV-2","AGACCATCGATAATGC",4,79.96,9.88,-0.89,0.07,2.19,1.03,0,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","AGACCATCTAACACAG",5,38.7,10.67,-0.1,0.02,2.99,1,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AGACCATGCGTGGACC",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K S139G T201S",3
"lib1","SARS-CoV-2","AGACCATGTCCTCGAC",1,45.22,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","I2Q F167I A190S",3
"lib1","SARS-CoV-2","AGACCCAACGATCCGC",4,64.4,10.66,-0.11,0.05,2.84,1.03,0,">1 nonsynonymous","G9H F185L",2
"lib1","SARS-CoV-2","AGACCCAAGTTAGTCC",3,43.12,7.53,-3.24,0.5,1.5,1.06,0.08,">1 nonsynonymous","T85G P96K N118Y Y175F",4
"lib1","SARS-CoV-2","AGACCCAATAAAAAAA",2,9.54,6,-4.76,1.47,3,1.08,0,">1 nonsynonymous","C102S Y175V",2
"lib1","SARS-CoV-2","AGACCCAATGGCTACA",1,35.69,9.46,-1.3,0.1,2.8,1.06,0,">1 nonsynonymous","S29V F44N",2
"lib1","SARS-CoV-2","AGACCCAATTCTAAGG",4,59.49,10.44,-0.32,0.08,2.79,1.11,0,">1 nonsynonymous","T3M N109Q Q168H A190G",4
"lib1","SARS-CoV-2","AGACCCACTAATCACC",2,29.01,6.57,-4.2,0.35,1.5,1.08,0.01,">1 nonsynonymous","G83Y Y93S V103Y",3
"lib1","SARS-CoV-2","AGACCCATAAACATAG",1,9.25,10.78,0.01,0.07,2.91,1.03,0,"1 nonsynonymous","P54D",1
"lib1","SARS-CoV-2","AGACCCATCACAACGT",2,71.69,10.8,0.04,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCCCAAACCCAGC",3,26.16,8.36,-2.41,0.31,1.7,1.09,0.04,">1 nonsynonymous","K128M L162V Y175S",3
"lib1","SARS-CoV-2","AGACCCCACATCGTAG",6,53.99,10.42,-0.35,0.05,2.88,1.08,0,">1 nonsynonymous","A14R T63G",2
"lib1","SARS-CoV-2","AGACCCCACTCAAGTA",6,27.41,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A14E S43T P96Q N118S",4
"lib1","SARS-CoV-2","AGACCCCATATTACTC",2,31.4,9.85,-0.91,0.14,1.88,1.09,0.01,">1 nonsynonymous","A22R L38T",2
"lib1","SARS-CoV-2","AGACCCCTTAAGGCGG",7,79.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59V N110I Y121R P133H G155R",5
"lib1","SARS-CoV-2","AGACCCGAATCCATAA",4,48.53,6,-4.76,1.34,1.5,1.17,0.01,">1 nonsynonymous","D68A V77K G166L",3
"lib1","SARS-CoV-2","AGACCCGACAGCAAAT",6,56.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S113M L131P T140H",3
"lib1","SARS-CoV-2","AGACCCGACAGCCAAC",5,0,NA,NA,NA,NA,NA,NA,"stop","P7L S36* S41I K128G K198I",5
"lib1","SARS-CoV-2","AGACCCGAGACAGTCC",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T C49Q T201L",3
"lib1","SARS-CoV-2","AGACCCGATGTAAATA",2,11.97,6.2,-4.56,0.39,1.5,1.06,0.01,">1 nonsynonymous","N92T Y119M G146T",3
"lib1","SARS-CoV-2","AGACCCGCAATAAATT",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K N58M A105P R136T",4
"lib1","SARS-CoV-2","AGACCCGCTAGAGTAC",3,36.41,10.84,0.07,0.1,2.85,1.05,0.01,"1 nonsynonymous","D97R",1
"lib1","SARS-CoV-2","AGACCCGGTCATACCT",1,10.88,10.28,-0.48,0.13,2.9,1,0.01,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","AGACCCTAGCTCACGA",5,36.58,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11Y K26H L60P N92M S129F Y165P",6
"lib1","SARS-CoV-2","AGACCCTATGTTGGAA",1,23.35,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37R T55V G83E F126N P133D",5
"lib1","SARS-CoV-2","AGACCCTCTAGGCCCA",3,10.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41Y I88V W106L F134L",4
"lib1","SARS-CoV-2","AGACCCTGCCAGACTG",4,38.96,10.23,-0.53,0.08,2.87,1.03,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","AGACCCTGCGAGGATT",4,41.24,10.66,-0.1,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCGAATGTAAGAC",11,171.71,9.96,-0.8,0.05,2.5,1.02,0,"1 nonsynonymous","V11A",1
"lib1","SARS-CoV-2","AGACCGACACAAAAAT",7,115.16,10.79,0.02,0.06,2.93,1.05,0,"1 nonsynonymous","K114Q",1
"lib1","SARS-CoV-2","AGACCGACGAAGACCT",8,93.4,10.58,-0.18,0.05,2.91,1.03,0,"1 nonsynonymous","A81R",1
"lib1","SARS-CoV-2","AGACCGACTATCACTA",1,2.64,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGACCGATCAAAAATT",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K K128Q S139V",3
"lib1","SARS-CoV-2","AGACCGATCCCGCGAG",2,29.96,8.65,-2.12,0.38,1.5,1.01,0.07,">1 nonsynonymous","R73F A81T N118Y",3
"lib1","SARS-CoV-2","AGACCGCGAAACGTGG",3,86.74,10.42,-0.34,0.05,2.84,1.03,0,">1 nonsynonymous","P54S N64T T100A V153E",4
"lib1","SARS-CoV-2","AGACCGCGACACGAAT",2,45.45,10.8,0.03,0.1,2.92,1.03,0,">1 nonsynonymous","G9D E141S",2
"lib1","SARS-CoV-2","AGACCGCGTAATAAAA",1,46.12,9.85,-0.91,0.07,2.89,1.01,0,">1 nonsynonymous","Y35V N151F P169H",3
"lib1","SARS-CoV-2","AGACCGCTAAGTTAAC",5,60.63,10.87,0.11,0.05,2.97,1.01,0,">1 nonsynonymous","N110R V173R",2
"lib1","SARS-CoV-2","AGACCGGAATAAATTA",7,88.28,9.99,-0.77,0.1,2.15,1.06,0,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","AGACCGGATTGAGAAG",2,7.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18P T46P",2
"lib1","SARS-CoV-2","AGACCGGCTGATAACG",6,115.21,10.67,-0.1,0.04,2.93,1.04,0,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","AGACCGGGCTCGTACG",6,28.8,10.22,-0.54,0.1,2.67,1,0,">1 nonsynonymous","A33S L60P",2
"lib1","SARS-CoV-2","AGACCGGTACACGTAC",2,64.32,10.71,-0.06,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCGTAACAGGTAA",3,37.59,10.54,-0.22,0.08,2.91,1,0,"1 nonsynonymous","N30T",1
"lib1","SARS-CoV-2","AGACCGTATAATTCTT",2,27.68,10.31,-0.45,0.13,2.53,1,0.01,">1 nonsynonymous","C102I P149L F160H",3
"lib1","SARS-CoV-2","AGACCGTGGCCGGGGT",3,41.82,9.22,-1.54,0.18,1.71,1.08,0.02,">1 nonsynonymous","W106L K132Y T201A",3
"lib1","SARS-CoV-2","AGACCGTGTTACTCAC",5,113.17,10.64,-0.12,0.03,2.9,1.03,0,">1 nonsynonymous","G9Q F160P",2
"lib1","SARS-CoV-2","AGACCGTTCTTGACCG",1,41.19,10.77,0,0.04,2.9,1.04,0,">1 nonsynonymous","N4G G9W",2
"lib1","SARS-CoV-2","AGACCTAAAAAACTAT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89T G166W",2
"lib1","SARS-CoV-2","AGACCTAACTGAAGGC",8,2.8,NA,NA,NA,NA,NA,NA,"stop","F17W F47N C61* S69M S164N",5
"lib1","SARS-CoV-2","AGACCTACATTTAATC",7,103.57,10.58,-0.19,0.07,2.89,1.06,0,">1 nonsynonymous","T3N G83Y",2
"lib1","SARS-CoV-2","AGACCTACGGGCTTTA",2,18.29,10.25,-0.52,0.14,2.74,1,0.01,">1 nonsynonymous","A89T D98E",2
"lib1","SARS-CoV-2","AGACCTAGTTAAAATT",3,55.84,9.83,-0.93,0.06,2.33,1.03,0,">1 nonsynonymous","A14V D98R",2
"lib1","SARS-CoV-2","AGACCTATAAGTTAGG",3,41.19,6,-4.76,0.95,3,1.09,0,">1 nonsynonymous","W23R W106L G146L",3
"lib1","SARS-CoV-2","AGACCTCAAAAAAATT",5,92.11,6.11,-4.65,0.73,1.5,1.18,0.02,">1 nonsynonymous","G9L D90H T148V V181Y",4
"lib1","SARS-CoV-2","AGACCTCAACGATATA",3,116.21,8.08,-2.69,0.15,2.09,1.08,0.01,">1 nonsynonymous","A22S K87C L95I Y119D Q144T",5
"lib1","SARS-CoV-2","AGACCTCAGCTGACCG",1,10.97,9.59,-1.17,0.38,1.5,1.33,0.06,">1 nonsynonymous","F8L W23L V173K",3
"lib1","SARS-CoV-2","AGACCTCCTTAATCCC",1,39.03,9.72,-1.05,0.13,2.81,1.12,0.01,">1 nonsynonymous","T100R Y119R E141F",3
"lib1","SARS-CoV-2","AGACCTCTATCGCTGT",6,101.62,10.81,0.05,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACCTGAAAGCCAAT",10,58.21,6,-4.76,1.5,1.5,1.13,0.01,">1 nonsynonymous","I2A V11H S36C T100Y C158S",5
"lib1","SARS-CoV-2","AGACCTGAACAGTACC",8,64.78,6,-4.76,1.95,1.5,1.09,0.01,">1 nonsynonymous","P7M Y93V Y119R",3
"lib1","SARS-CoV-2","AGACCTGAACGATTGA",4,46.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5M V103L P177A",3
"lib1","SARS-CoV-2","AGACCTGACACACATG",6,39.75,6.82,-3.94,0.5,1.5,1.11,0.04,">1 nonsynonymous","N64L Y91V W106R Q163N",4
"lib1","SARS-CoV-2","AGACCTGAGGTTAGTA",3,38.21,8.53,-2.23,0.19,1.55,1.15,0.02,">1 nonsynonymous","L60W Y91T",2
"lib1","SARS-CoV-2","AGACCTGGCCACGCGG",7,253.32,10.21,-0.56,0.03,2.88,1.04,0,">1 nonsynonymous","C61R I142H",2
"lib1","SARS-CoV-2","AGACCTTCCAAGATAA",5,53.3,10.78,0.01,0.05,2.94,1,0,"1 nonsynonymous","N130Q",1
"lib1","SARS-CoV-2","AGACCTTGAGAAGTAC",2,27.2,6.65,-4.12,0.39,1.5,1.14,0.02,">1 nonsynonymous","F12N L95V C150F",3
"lib1","SARS-CoV-2","AGACCTTTCAAAGGAT",2,1.52,NA,NA,NA,NA,NA,NA,"stop","S43H L95S P149L Y175*",4
"lib1","SARS-CoV-2","AGACCTTTGTAGTAGA",5,93,6.02,-4.74,0.81,1.5,1.18,0.01,">1 nonsynonymous","Q79L L125K G152M",3
"lib1","SARS-CoV-2","AGACGAAAAAATAGAA",8,1.63,NA,NA,NA,NA,NA,NA,"stop","K87C E186*",2
"lib1","SARS-CoV-2","AGACGAAAAACCGTTA",1,10.28,8.33,-2.43,0.41,1.92,1.22,0.05,"1 nonsynonymous","Y143K",1
"lib1","SARS-CoV-2","AGACGAAAACTGTTCC",1,0.36,NA,NA,NA,NA,NA,NA,"stop","E10F L60* S69L K87Q D112T",5
"lib1","SARS-CoV-2","AGACGAAAAGCATATA",4,38.03,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S45N N107T F126C",3
"lib1","SARS-CoV-2","AGACGAAACAAGTACC",7,3.92,NA,NA,NA,NA,NA,NA,"stop","G9V I88S E186*",3
"lib1","SARS-CoV-2","AGACGAAATACGCACA",1,6.95,6,-4.76,2,1.5,1.06,0.04,">1 nonsynonymous","F12L V77L N120V C158T",4
"lib1","SARS-CoV-2","AGACGAAATCTTATAT",4,46.19,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F17H I80S E135G F167I",4
"lib1","SARS-CoV-2","AGACGAAATGCACATC",5,124.41,9.83,-0.93,0.05,2.82,1.08,0,">1 nonsynonymous","S41T Y119K K199C",3
"lib1","SARS-CoV-2","AGACGAACCAGATGCT",4,18.42,7.92,-2.85,0.4,1.5,1,0.07,">1 nonsynonymous","R16C R27G K94D F99W N107M",5
"lib1","SARS-CoV-2","AGACGAACTTAGATGA",1,34.32,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","E10Y S29V N107M C158T",4
"lib1","SARS-CoV-2","AGACGAAGTAGGTAAC",3,59.44,8.41,-2.35,0.11,2.22,1.07,0,">1 nonsynonymous","G117R G146H",2
"lib1","SARS-CoV-2","AGACGAATGTCTCTAA",2,81.63,10.56,-0.2,0.06,2.95,1.02,0,">1 nonsynonymous","R78S K128I T201E",3
"lib1","SARS-CoV-2","AGACGAATTAATCTCA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","S36* A105P I138R",3
"lib1","SARS-CoV-2","AGACGACACAGACGGC",7,157.56,10.77,0,0.05,2.94,1.04,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","AGACGACCAAAGAATT",1,17.57,8.88,-1.89,0.25,1.59,1.31,0.03,">1 nonsynonymous","N4T W106S L131M",3
"lib1","SARS-CoV-2","AGACGACCATACTAAC",9,7.91,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I2C T15Y P96Y",3
"lib1","SARS-CoV-2","AGACGACCATTGAGTG",8,93.13,10.71,-0.05,0.05,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGACGTAAATCAA",6,76.87,9.29,-1.47,0.1,2.31,1.13,0,">1 nonsynonymous","F44T K87I P133Y N151Q",4
"lib1","SARS-CoV-2","AGACGACTTATAATAA",18,199.64,9.67,-1.09,0.05,2.73,1.05,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","AGACGAGCCGCAATTT",7,109.05,10.32,-0.44,0.05,2.87,1.05,0,">1 nonsynonymous","K56N R136L",2
"lib1","SARS-CoV-2","AGACGAGCCGGCCCCG",4,20.75,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T63P I88L Y165I V180K",4
"lib1","SARS-CoV-2","AGACGAGCTAATCATA",4,17.99,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","C6R W23L T170M",3
"lib1","SARS-CoV-2","AGACGAGGTACATAGC",6,17.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2T F44Y F99K W106K D137C",5
"lib1","SARS-CoV-2","AGACGATACGTATATC",2,51.07,10.87,0.1,0.09,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGATATCGCATGG",6,90.51,9.91,-0.85,0.07,2.58,1.06,0,">1 nonsynonymous","D34G V173N",2
"lib1","SARS-CoV-2","AGACGATCCGTATCAT",4,56.36,10.03,-0.74,0.1,2.25,1.05,0,">1 nonsynonymous","Q84V F99L",2
"lib1","SARS-CoV-2","AGACGCAAAGGGTACA",3,33.42,9.85,-0.92,0.13,2.22,1.07,0.01,">1 nonsynonymous","A14L N110I P149K",3
"lib1","SARS-CoV-2","AGACGCAACCGATATA",2,11.99,6,-4.76,2,1.5,1.14,0.07,">1 nonsynonymous","C6S R16N V65Y G86E G146T Q176M",6
"lib1","SARS-CoV-2","AGACGCAACTAAACCG",6,32.23,10.13,-0.63,0.08,2.88,1,0,">1 nonsynonymous","T3M F8W G146D",3
"lib1","SARS-CoV-2","AGACGCAAGTATAATT",6,64.82,6.34,-4.42,0.38,1.5,1.15,0.01,">1 nonsynonymous","V77L K94A N107L",3
"lib1","SARS-CoV-2","AGACGCACACATAGTT",3,25.41,9.3,-1.46,0.22,1.55,1.21,0.03,">1 nonsynonymous","Y35S V52R",2
"lib1","SARS-CoV-2","AGACGCACTGTCCATG",2,16.7,7.2,-3.56,0.4,1.58,1.28,0.05,">1 nonsynonymous","R25A V37W I138T",3
"lib1","SARS-CoV-2","AGACGCAGAAAAATAA",6,0.03,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib1","SARS-CoV-2","AGACGCATAAAGATAA",1,18.3,10.61,-0.15,0.11,2.93,1,0.01,">1 nonsynonymous","G9N S36I S43V",3
"lib1","SARS-CoV-2","AGACGCATACACTACT",4,80.75,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N4T N40S A67S G172D",4
"lib1","SARS-CoV-2","AGACGCCACACAACCA",3,51.46,9.81,-0.96,0.11,1.93,1.08,0,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","AGACGCCACCTGTACC",2,120.38,6.06,-4.7,0.75,1.5,1.16,0.01,">1 nonsynonymous","L122S D137L S184M",3
"lib1","SARS-CoV-2","AGACGCCCAAAAATGA",1,33.37,10.15,-0.61,0.11,2.81,1,0,">1 nonsynonymous","A22L A145V V153E",3
"lib1","SARS-CoV-2","AGACGCCCTATCTGAA",4,73.9,6,-4.76,2,2.25,1.22,0.01,">1 nonsynonymous","R27W K94C L111S Y159G",4
"lib1","SARS-CoV-2","AGACGCCGACTGAGCC",8,210.01,10.52,-0.25,0.05,2.82,1.06,0,">1 nonsynonymous","L5A L111F Y175F T201L",4
"lib1","SARS-CoV-2","AGACGCCGGCAGCAAA",1,1.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","AGACGCCTAAACCCTA",2,18.33,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6V F17T R25K G155A",4
"lib1","SARS-CoV-2","AGACGCCTGAAATAGG",2,33.49,10.63,-0.13,0.06,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGCGCACACGAGA",1,6.72,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","I104D S129H G146R",3
"lib1","SARS-CoV-2","AGACGCGGAAAACATA",2,18.5,9.75,-1.02,0.14,2.77,1.02,0.01,">1 nonsynonymous","R16K S19C I104L E141K",4
"lib1","SARS-CoV-2","AGACGCTCGAATCCTT",9,0.71,NA,NA,NA,NA,NA,NA,"stop","Y91T L111* N157P",3
"lib1","SARS-CoV-2","AGACGCTTGGAATAAG",1,16.38,10.76,-0.01,0.12,2.68,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGAAACACTAAC",1,8.27,10.53,-0.23,0.14,2.7,1,0.01,"1 nonsynonymous","A89C",1
"lib1","SARS-CoV-2","AGACGGAAACTGTTAG",8,51.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6M N64S S113Q P149L S184C",5
"lib1","SARS-CoV-2","AGACGGAATACCATGA",11,97.52,10.7,-0.06,0.1,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGAATTGCAAAC",1,29.39,9.8,-0.97,0.12,2.74,1.02,0,">1 nonsynonymous","I2Y V65T I142Y",3
"lib1","SARS-CoV-2","AGACGGACAACGAGAC",2,18.18,10.67,-0.09,0.05,2.99,1.01,0,">1 nonsynonymous","S41L T100L",2
"lib1","SARS-CoV-2","AGACGGACAAGTGAAC",5,52.24,10.67,-0.09,0.03,2.99,1,0,">1 nonsynonymous","K48V G196A",2
"lib1","SARS-CoV-2","AGACGGACAATAATTT",5,127.74,10.61,-0.15,0.06,2.94,1.04,0,">1 nonsynonymous","K56Q N120I",2
"lib1","SARS-CoV-2","AGACGGAGAGGTTAAA",5,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98F G117V S139H T201D",4
"lib1","SARS-CoV-2","AGACGGAGGATCTCAT",2,0.78,NA,NA,NA,NA,NA,NA,"stop","C61F G116* Q163C",3
"lib1","SARS-CoV-2","AGACGGATTAAGGTAC",4,134.26,10.75,-0.01,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGATTGTCTTAT",1,41.85,10.67,-0.1,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGCAAAGCAGAA",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R F44V",2
"lib1","SARS-CoV-2","AGACGGCACGGACTAA",8,99.92,10.71,-0.06,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGCCTACTTTAT",1,32.54,10.35,-0.42,0.05,2.89,1.03,0,">1 nonsynonymous","T63A F156R",2
"lib1","SARS-CoV-2","AGACGGCGCCTACATA",2,67.83,10.05,-0.71,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGGGAGTAACGGA",3,36.67,9.98,-0.78,0.12,2.06,1.07,0.01,">1 nonsynonymous","T15G D59L P149T",3
"lib1","SARS-CoV-2","AGACGGGGGAGCAAAG",2,11.85,9.5,-1.27,0.28,1.75,1.32,0.06,">1 nonsynonymous","D75L W106L N130A",3
"lib1","SARS-CoV-2","AGACGGGGTATCAAAA",6,11.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F62Y K87D V103G Y119V",4
"lib1","SARS-CoV-2","AGACGGGTGGAGAAAT",8,1.4,NA,NA,NA,NA,NA,NA,"stop","L38V Q84* Y119W R127H E186N K199T",6
"lib1","SARS-CoV-2","AGACGGTCAACGAACC",1,98.4,10.43,-0.34,0.05,2.83,1.03,0,">1 nonsynonymous","F62D G196L",2
"lib1","SARS-CoV-2","AGACGGTCCATAGATG",1,59.21,10.45,-0.31,0.07,2.79,1.08,0,">1 nonsynonymous","R16I K56D A81K",3
"lib1","SARS-CoV-2","AGACGGTTAAAAGATT",6,49.93,10.69,-0.08,0.07,2.98,1.03,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","AGACGGTTCCGGCATT",5,31.76,6.97,-3.79,0.25,1.5,1.04,0.01,">1 nonsynonymous","R16H K94V A105R",3
"lib1","SARS-CoV-2","AGACGGTTCGCATACT",3,0.87,NA,NA,NA,NA,NA,NA,"stop","K56* G116Q F156S G172L",4
"lib1","SARS-CoV-2","AGACGTAAAAGTAAAT",3,25.82,10.22,-0.54,0.15,2.75,1,0.01,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","AGACGTAAGATTGTTG",4,94.66,9.86,-0.91,0.05,2.86,1.04,0,">1 nonsynonymous","S43F G146T",2
"lib1","SARS-CoV-2","AGACGTAATTCCTGCT",3,21.86,8.06,-2.7,0.31,1.5,1.15,0.04,"1 nonsynonymous","I88F",1
"lib1","SARS-CoV-2","AGACGTACAACGGGCG",3,20.95,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50N Y66G F99K N157T",4
"lib1","SARS-CoV-2","AGACGTACCGAAGGAG",2,122.06,10.1,-0.66,0.07,2.67,1.03,0,">1 nonsynonymous","L38V V180I",2
"lib1","SARS-CoV-2","AGACGTACTTAATAGT",1,33.18,10.73,-0.04,0.08,2.85,1.1,0,">1 nonsynonymous","G83L T100V",2
"lib1","SARS-CoV-2","AGACGTAGAGCCATCT",5,48.99,8.82,-1.94,0.18,1.67,1.24,0.01,">1 nonsynonymous","A14E F99Y K198I",3
"lib1","SARS-CoV-2","AGACGTAGAGGTTCAT",3,26.49,6,-4.76,1.18,1.5,1.2,0.01,">1 nonsynonymous","D112L E141C G196D",3
"lib1","SARS-CoV-2","AGACGTATGATAAAGT",6,38.35,6.02,-4.75,0.69,3,1.2,0.01,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","AGACGTCATCACCAGG",6,119.72,10.21,-0.56,0.04,2.73,1.02,0,">1 nonsynonymous","V65T G146A",2
"lib1","SARS-CoV-2","AGACGTGCAAACCATT",3,18.82,10.45,-0.32,0.08,2.79,1.15,0,">1 nonsynonymous","S139H T201H",2
"lib1","SARS-CoV-2","AGACGTGCTACCGCTG",3,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74D K114N",2
"lib1","SARS-CoV-2","AGACGTTAAACCTTGA",3,77.16,10.74,-0.02,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGTTACCCTTGAG",3,40.37,10.72,-0.04,0.03,2.95,1.01,0,"1 nonsynonymous","A14K",1
"lib1","SARS-CoV-2","AGACGTTAGACGACTT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","V32* P54K",2
"lib1","SARS-CoV-2","AGACGTTATTAAAATC",2,4.86,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGACGTTCATAGAGAC",1,5.74,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C49P S129D",2
"lib1","SARS-CoV-2","AGACGTTGAAAAAACG",1,34.06,6.54,-4.22,0.49,1.5,1.24,0.02,">1 nonsynonymous","I88M F185V",2
"lib1","SARS-CoV-2","AGACGTTTCCAAAAAT",1,16.01,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","F8Y G86I N107Q E154S",4
"lib1","SARS-CoV-2","AGACGTTTGAGACTGA",6,99.61,10.77,0.01,0.08,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACGTTTTCACAAGA",1,0.93,NA,NA,NA,NA,NA,NA,"stop","E10A K56* S129N T140S C150N",5
"lib1","SARS-CoV-2","AGACTAAAAAAAGAAA",1,15.01,9.41,-1.35,0.18,1.99,1.26,0.02,">1 nonsynonymous","A22T Y35R",2
"lib1","SARS-CoV-2","AGACTAAAACAAAGAG",2,87.73,10.82,0.06,0.12,2.85,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTAAAATCTTCTG",1,13.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8G F99R",2
"lib1","SARS-CoV-2","AGACTAAAATGTTATT",3,3.52,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","AGACTAAACGCACATG",5,90.31,8.53,-2.24,0.15,2.92,1.05,0.01,">1 nonsynonymous","I138S Y159L",2
"lib1","SARS-CoV-2","AGACTAAACGTACGGA",1,12.51,8.65,-2.11,0.26,1.5,1.06,0.04,">1 nonsynonymous","G51E L60E E141I",3
"lib1","SARS-CoV-2","AGACTAAAGGCCTCTA",1,17.16,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33R K94P L122M",3
"lib1","SARS-CoV-2","AGACTAAATACGTTAA",1,20.46,8.16,-2.61,0.3,1.5,1.18,0.03,">1 nonsynonymous","A33Q N107L",2
"lib1","SARS-CoV-2","AGACTAACAACCCGAG",8,69.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6L A81M T100D K128S",4
"lib1","SARS-CoV-2","AGACTAACAAGTTAAT",1,56.48,10.12,-0.65,0.06,2.17,1,0,">1 nonsynonymous","F70M T100H",2
"lib1","SARS-CoV-2","AGACTAACCAAATAAT",3,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R I104N",2
"lib1","SARS-CoV-2","AGACTAACCTAGACTC",1,52.32,10.01,-0.75,0.12,2.09,1,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","AGACTAACGGGGATAA",2,64.86,10.66,-0.11,0.07,2.92,1.05,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","AGACTAACTAAAGACG",4,78.51,9.41,-1.36,0.06,2.65,1.07,0,">1 nonsynonymous","D34V T55D G155D",3
"lib1","SARS-CoV-2","AGACTAACTTAAACGC",4,1.36,NA,NA,NA,NA,NA,NA,"stop","Y39* S45R V52D G83D G86L",5
"lib1","SARS-CoV-2","AGACTAAGCTTAGATA",1,40.2,10.56,-0.21,0.06,2.87,1.02,0,">1 nonsynonymous","A18S D98L F160Q",3
"lib1","SARS-CoV-2","AGACTAAGGGAGAACG",11,161.55,10.35,-0.42,0.04,2.9,1.04,0,">1 nonsynonymous","A81E D98K",2
"lib1","SARS-CoV-2","AGACTAATATAAGGCC",2,92.79,10.35,-0.41,0.04,2.85,1.07,0,">1 nonsynonymous","K132R P169V",2
"lib1","SARS-CoV-2","AGACTAATCCTTGAAC",5,50.68,8.45,-2.31,0.24,1.53,1.19,0.02,">1 nonsynonymous","S36H K56S T85D D90I",4
"lib1","SARS-CoV-2","AGACTAATTTGAATCC",2,214.48,10.32,-0.44,0.04,2.93,1,0,">1 nonsynonymous","S36E Y91H",2
"lib1","SARS-CoV-2","AGACTACAACGGTAGT",1,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T T15N F44C F70L",4
"lib1","SARS-CoV-2","AGACTACAATAAATAT",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S S139L",2
"lib1","SARS-CoV-2","AGACTACAATTATGAA",5,80.05,10.77,0,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTACCATGGGGGA",14,372.02,9.09,-1.68,0.13,2.21,1.17,0.01,"1 nonsynonymous","Y165V",1
"lib1","SARS-CoV-2","AGACTACCCTACTCAA",12,33.13,6,-4.76,1.06,1.5,1.16,0.02,">1 nonsynonymous","A42V C49Y S164Y L187P P197A",5
"lib1","SARS-CoV-2","AGACTACCTATGCTAC",6,101.78,10.26,-0.5,0.04,2.89,1.05,0,">1 nonsynonymous","I28A S41T L122M",3
"lib1","SARS-CoV-2","AGACTACCTTAATCTT",6,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S W23R A81E",3
"lib1","SARS-CoV-2","AGACTACGAAAAACTG",2,16.36,9.76,-1.01,0.12,2.01,1,0.01,">1 nonsynonymous","F62T P133L",2
"lib1","SARS-CoV-2","AGACTACGAAATTCTA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","T3L V37E T85*",3
"lib1","SARS-CoV-2","AGACTACGAAATTGGC",1,42.73,10.76,0,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTACGTTTGACAT",3,73.15,10.58,-0.18,0.04,2.91,1.02,0,">1 nonsynonymous","S139R V173N",2
"lib1","SARS-CoV-2","AGACTACTCTAAATTT",1,19.66,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55S N64L A105V R136P",4
"lib1","SARS-CoV-2","AGACTAGAACGTACCA",1,10.54,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90R S129K C158T",3
"lib1","SARS-CoV-2","AGACTAGATGTAGATG",7,87.83,10.44,-0.32,0.05,2.9,1.04,0,">1 nonsynonymous","E141P V153S",2
"lib1","SARS-CoV-2","AGACTAGATTACATTG",12,159.29,9.53,-1.23,0.1,2.13,1.1,0,">1 nonsynonymous","D97Y Y121V T201K",3
"lib1","SARS-CoV-2","AGACTAGCAATCACGC",1,12.29,9.67,-1.09,0.19,1.76,1.02,0.02,">1 nonsynonymous","S36A K94L",2
"lib1","SARS-CoV-2","AGACTAGCCGAGAATT",6,64.83,10.92,0.16,0.08,2.86,1.05,0,">1 nonsynonymous","V37F T140K",2
"lib1","SARS-CoV-2","AGACTAGCGTTTGGAA",6,35.38,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D59S A67Y W106F Q144N Y165S P191Y G196E",7
"lib1","SARS-CoV-2","AGACTAGCTTTATTGT",3,6.19,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14V K48S S139V",3
"lib1","SARS-CoV-2","AGACTAGGGGTTCCCC",3,9.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R73L T85V F185S",3
"lib1","SARS-CoV-2","AGACTAGTAAGCACTA",1,32.41,9.01,-1.76,0.06,2.93,1.03,0,">1 nonsynonymous","G9D G117D",2
"lib1","SARS-CoV-2","AGACTAGTCTCAACGT",3,15.85,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","F8R G51D N120H",3
"lib1","SARS-CoV-2","AGACTAGTTAACAAGA",7,1.49,NA,NA,NA,NA,NA,NA,"stop","D59Y G74E K128V Y165*",4
"lib1","SARS-CoV-2","AGACTATAACTGTTAA",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T I104F",2
"lib1","SARS-CoV-2","AGACTATAGATTTTGG",5,60.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E141S C150F S184T",3
"lib1","SARS-CoV-2","AGACTATATTGCAGTC",3,58.69,9.42,-1.34,0.08,2.78,1.1,0,">1 nonsynonymous","I2F L60H Y119Q",3
"lib1","SARS-CoV-2","AGACTATCATACTCAA",2,50.47,6.46,-4.3,0.67,1.5,1.21,0.03,">1 nonsynonymous","K26M A67S D90E T100M K114G",5
"lib1","SARS-CoV-2","AGACTATCATTCAAAC",2,25.93,10.72,-0.05,0.09,2.94,1.06,0,">1 nonsynonymous","Q163C S200Y",2
"lib1","SARS-CoV-2","AGACTATCTTGTCCAG",1,5.11,10.87,0.11,0.13,2.83,1.13,0.01,"1 nonsynonymous","N4H",1
"lib1","SARS-CoV-2","AGACTATGAAACAAGA",7,49.97,9.21,-1.56,0.15,1.52,1.16,0.01,">1 nonsynonymous","I2N F17C D97T",3
"lib1","SARS-CoV-2","AGACTATGAAGTCGAA",3,87.82,10.79,0.03,0.07,2.87,1.07,0,"1 nonsynonymous","K199W",1
"lib1","SARS-CoV-2","AGACTATGACTCGAAA",1,33.35,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11L I88S P149T",3
"lib1","SARS-CoV-2","AGACTATGCGACAGAG",4,54.55,10.54,-0.22,0.03,2.97,1.01,0,">1 nonsynonymous","V37G T85F",2
"lib1","SARS-CoV-2","AGACTATGTCGCTTCG",5,66.39,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F134P P149L T170H T201G",4
"lib1","SARS-CoV-2","AGACTATTACAAACTA",1,11.43,9.99,-0.78,0.2,2.02,1.06,0.01,">1 nonsynonymous","G83D D98N Y123L",3
"lib1","SARS-CoV-2","AGACTATTCCAGCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14V I104A G116* L162R",4
"lib1","SARS-CoV-2","AGACTATTGAATTAAA",3,62.45,8.47,-2.3,0.21,1.9,1.12,0.02,">1 nonsynonymous","W106T G166T T201R",3
"lib1","SARS-CoV-2","AGACTCAAAATGTAAA",1,29.94,10.01,-0.76,0.09,2.99,1,0,">1 nonsynonymous","V115D F126M",2
"lib1","SARS-CoV-2","AGACTCAAAGATATAA",4,19.62,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y93H F156Y",2
"lib1","SARS-CoV-2","AGACTCACACGCTAAT",4,47.89,8.05,-2.72,0.25,1.5,1.1,0.02,">1 nonsynonymous","Y35L L183S",2
"lib1","SARS-CoV-2","AGACTCACCAAGCTCA",7,73.5,6,-4.76,1.54,1.5,1.2,0.03,">1 nonsynonymous","I2R G51Y E135P S164H",4
"lib1","SARS-CoV-2","AGACTCACGGCATATA",4,41.22,9.92,-0.85,0.1,2.29,1.01,0,">1 nonsynonymous","I104M R136N T201I",3
"lib1","SARS-CoV-2","AGACTCAGAGAGAGTG",11,76.74,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N24F C61Y P96T Y119W C158V",5
"lib1","SARS-CoV-2","AGACTCAGATCGCTTG",2,0.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","AGACTCAGCGGTAGTA",5,0.95,NA,NA,NA,NA,NA,NA,"stop","D34L K56* C102S",3
"lib1","SARS-CoV-2","AGACTCCAAAAGAAGC",6,74.68,10.73,-0.03,0.06,2.91,1.07,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","AGACTCCATAGATTGA",8,2.17,NA,NA,NA,NA,NA,NA,"stop","G86* G146*",2
"lib1","SARS-CoV-2","AGACTCCATAGGACGC",3,48.78,9.89,-0.87,0.1,2.26,1.1,0,">1 nonsynonymous","N30E V115R Y121M",3
"lib1","SARS-CoV-2","AGACTCCCACCTGCTT",2,46.79,10.94,0.17,0.09,2.84,1.1,0,"1 nonsynonymous","R16Y",1
"lib1","SARS-CoV-2","AGACTCCCTGGTATGG",2,35.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C150R N157R V180I",3
"lib1","SARS-CoV-2","AGACTCCGTGTCTCTT",2,7.28,10.51,-0.25,0.06,2.94,1,0,">1 nonsynonymous","V37E E186F",2
"lib1","SARS-CoV-2","AGACTCCTGAAAAGGG",6,76.01,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","D34L Y159A",2
"lib1","SARS-CoV-2","AGACTCCTGATCCAAC",4,51.41,9.84,-0.93,0.05,2.89,1.04,0,">1 nonsynonymous","D90R F156N",2
"lib1","SARS-CoV-2","AGACTCCTGCACGAAC",1,13.18,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","S41P T85K D98T W106R Y175S",5
"lib1","SARS-CoV-2","AGACTCCTGCCAACAC",8,96.45,9.63,-1.13,0.13,2.48,1.06,0.01,">1 nonsynonymous","S41R N107K",2
"lib1","SARS-CoV-2","AGACTCCTTAAACAGG",8,91.42,10.22,-0.54,0.05,2.87,1,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","AGACTCCTTAAAGATA",4,129.58,10.74,-0.02,0.07,2.93,1.05,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","AGACTCGAGGAGCAGG",8,0.64,NA,NA,NA,NA,NA,NA,"stop","E10F W23* N120L",3
"lib1","SARS-CoV-2","AGACTCGCTCGAAGCG",2,77.71,10.78,0.02,0.07,2.93,1.04,0,"1 nonsynonymous","F160H",1
"lib1","SARS-CoV-2","AGACTCGTAAAAAACC",2,11.49,8.85,-1.92,0.12,2.73,1.01,0.01,">1 nonsynonymous","F44V G116F E154I",3
"lib1","SARS-CoV-2","AGACTCTAAAGTACTA",4,120.7,10.27,-0.49,0.04,2.92,1,0,">1 nonsynonymous","C6N I138V",2
"lib1","SARS-CoV-2","AGACTCTAACTTTAAA",5,33.78,6,-4.76,1.38,1.5,1.12,0.02,">1 nonsynonymous","G83Y G174N R179L",3
"lib1","SARS-CoV-2","AGACTCTACAGTCAGC",3,37.11,9.25,-1.51,0.06,2.8,1.1,0,">1 nonsynonymous","N64D G117N",2
"lib1","SARS-CoV-2","AGACTCTACCCAAACC",3,16.08,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T15W N40Y G101H",3
"lib1","SARS-CoV-2","AGACTCTGACCTCCAA",7,36.22,7.5,-3.27,0.42,1.5,1.1,0.07,">1 nonsynonymous","C49H V71L D97L V103L P149S",5
"lib1","SARS-CoV-2","AGACTCTTTCGCATCT",4,131.53,10.41,-0.35,0.06,2.85,1.07,0,"1 nonsynonymous","N120C",1
"lib1","SARS-CoV-2","AGACTGAAAATCACTA",2,16.35,6.7,-4.06,0.51,1.5,1.14,0.02,">1 nonsynonymous","G83I P96Q S139N",3
"lib1","SARS-CoV-2","AGACTGAACCTGTATA",2,8.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6I I104L Y123L",3
"lib1","SARS-CoV-2","AGACTGAATAAATGCA",3,3.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92I",1
"lib1","SARS-CoV-2","AGACTGAATGCACATA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","W23* G86C K198N",3
"lib1","SARS-CoV-2","AGACTGACAAAAATAG",3,60.47,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","I72K",1
"lib1","SARS-CoV-2","AGACTGACAATCAAGG",2,24.3,6,-4.76,1.31,1.5,1.2,0.05,">1 nonsynonymous","S36I K94N T148F G174F",4
"lib1","SARS-CoV-2","AGACTGACACTGATTA",6,16.12,9.8,-0.96,0.22,1.83,1.05,0.02,"1 nonsynonymous","R127Q",1
"lib1","SARS-CoV-2","AGACTGAGAAGACTGA",8,24.43,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","A22V A89Y F99Q I142T L183V",5
"lib1","SARS-CoV-2","AGACTGAGCTTATAAT",2,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40I P54L F99I G116P",4
"lib1","SARS-CoV-2","AGACTGAGTAATTCCG",1,6.58,7.11,-3.66,0.44,1.5,1.14,0.07,">1 nonsynonymous","T3V G51I Y91L",3
"lib1","SARS-CoV-2","AGACTGATCACTGGTA",1,9.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I88R D97N",2
"lib1","SARS-CoV-2","AGACTGCAGAATAAAC",2,0.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AGACTGCCCCCTATGT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","AGACTGCCGAAAAAAA",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y R124K G166W",3
"lib1","SARS-CoV-2","AGACTGCGCTATATAA",2,40.26,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","F8E G83N L122P S129W E154V",5
"lib1","SARS-CoV-2","AGACTGCGGTCTATTA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","D75* P149D",2
"lib1","SARS-CoV-2","AGACTGCTAAATGTAT",4,25.36,7.28,-3.49,0.49,1.5,1.19,0.05,">1 nonsynonymous","K87T P161L",2
"lib1","SARS-CoV-2","AGACTGCTCAAAATAC",2,63.41,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L95F N107H G174K Y178A",4
"lib1","SARS-CoV-2","AGACTGCTCAGCATAA",4,44.54,8.83,-1.94,0.2,1.5,1.21,0.02,">1 nonsynonymous","V52N N107A",2
"lib1","SARS-CoV-2","AGACTGCTCATCAGAG",1,6.61,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","G51Y C61Y V77S L95Q F99L S129E F156N",7
"lib1","SARS-CoV-2","AGACTGGCAGTTACGG",6,72.05,10.39,-0.38,0.06,2.85,1.08,0,"1 nonsynonymous","A105G",1
"lib1","SARS-CoV-2","AGACTGGGATTCAAGT",3,24.95,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N13F F47K G146S Q168M",4
"lib1","SARS-CoV-2","AGACTGGGATTGAACT",2,70.93,10.59,-0.17,0.05,2.95,1.03,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","AGACTGGGCCGTTGTT",1,8.41,11.18,0.41,0.09,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTGGTCATTTGTG",7,79.96,10.66,-0.1,0.08,2.86,1.1,0,"1 nonsynonymous","T148M",1
"lib1","SARS-CoV-2","AGACTGTACCTAGTGG",3,39.85,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D90M G101M N120C",3
"lib1","SARS-CoV-2","AGACTGTACTATAATA",3,15.37,10.91,0.15,0.1,2.94,1.06,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","AGACTGTAGGAACATT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66P N92T P133* P161N",4
"lib1","SARS-CoV-2","AGACTGTATGCACGAA",4,27.4,10.71,-0.06,0.07,2.95,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTGTATTTCTAAA",5,25.73,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","S19T D98V C158F E186H T201R",5
"lib1","SARS-CoV-2","AGACTGTCAATGAATA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","S69I A105D L122* Y178P",4
"lib1","SARS-CoV-2","AGACTGTTCTCAGTGA",2,1.07,NA,NA,NA,NA,NA,NA,"stop","C6F A18E K114* T140E",4
"lib1","SARS-CoV-2","AGACTGTTTTGCCGGC",2,14.8,10.63,-0.14,0.03,2.94,1.05,0,">1 nonsynonymous","V37M A42T",2
"lib1","SARS-CoV-2","AGACTTAAAGATACGT",2,32.74,10.66,-0.1,0.04,2.98,1,0,">1 nonsynonymous","P149A G174N",2
"lib1","SARS-CoV-2","AGACTTAAATTCTGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","F70R K87*",2
"lib1","SARS-CoV-2","AGACTTAACCCCCGTA",2,6.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89D",1
"lib1","SARS-CoV-2","AGACTTAATCATTAGT",5,20.26,8.71,-2.05,0.37,1.5,1,0.04,">1 nonsynonymous","A14I A81N",2
"lib1","SARS-CoV-2","AGACTTACCAAGCGCT",6,5.29,NA,NA,NA,NA,NA,NA,"stop","I2K W23K F62V P161*",4
"lib1","SARS-CoV-2","AGACTTAGAGGACTAG",4,32.2,10.23,-0.53,0.1,2.79,1.07,0,">1 nonsynonymous","N107S T201L",2
"lib1","SARS-CoV-2","AGACTTAGCAAAGAGG",7,46.36,9.14,-1.62,0.11,2.15,1.09,0.01,">1 nonsynonymous","F8L S139Y G155R",3
"lib1","SARS-CoV-2","AGACTTATAAACGTCA",10,72.05,6.15,-4.61,0.42,1.5,1.12,0.01,">1 nonsynonymous","R127V Q144M",2
"lib1","SARS-CoV-2","AGACTTATAGAACGCT",7,1,NA,NA,NA,NA,NA,NA,"stop","R127* Y143V",2
"lib1","SARS-CoV-2","AGACTTATAGGGGGAA",1,10.38,10.47,-0.3,0.31,2.91,1,0,">1 nonsynonymous","D90R G116S",2
"lib1","SARS-CoV-2","AGACTTATGGACCAAA",2,7.6,6,-4.76,2,3,1.02,0,">1 nonsynonymous","T15C G83S D97E D112V Y121H",5
"lib1","SARS-CoV-2","AGACTTCAAGAGTGGA",3,18.7,6.47,-4.3,0.65,1.5,1.26,0.03,">1 nonsynonymous","D98A E135T V180L",3
"lib1","SARS-CoV-2","AGACTTCACGGTAATC",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T F134N",2
"lib1","SARS-CoV-2","AGACTTCAGAACGAGT",3,2.24,NA,NA,NA,NA,NA,NA,"stop","L5R I80* Q84R K128L T148A",5
"lib1","SARS-CoV-2","AGACTTCCTCAGCTAC",2,41.34,9.12,-1.65,0.18,1.66,1.17,0.01,">1 nonsynonymous","R27K K87L Y91N Y123L Q144R",5
"lib1","SARS-CoV-2","AGACTTCTACGCGAAA",4,133.28,7.23,-3.54,0.21,1.88,1.14,0.01,">1 nonsynonymous","Y50F D98S Y175E",3
"lib1","SARS-CoV-2","AGACTTCTCATTGGAT",2,73.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4Y V11R N107M G117D R127T Y175D",6
"lib1","SARS-CoV-2","AGACTTGACGAAAATG",4,42.1,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A89L N157V",2
"lib1","SARS-CoV-2","AGACTTGACGCAGGTC",3,27.44,10.69,-0.08,0.06,2.92,1,0,">1 nonsynonymous","N130A T140L",2
"lib1","SARS-CoV-2","AGACTTGAGATCCTTG",6,99.81,9.78,-0.98,0.11,2.42,1.04,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","AGACTTGATCAGCAAA",2,40.19,9.59,-1.17,0.05,2.88,1.08,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","AGACTTGCAAGATACT",7,43.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N G86E",2
"lib1","SARS-CoV-2","AGACTTGGAGAAACAC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H Y21Q K87G F167M",4
"lib1","SARS-CoV-2","AGACTTGTGTTTTAAG",3,44.55,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","T55C N107T T170N",3
"lib1","SARS-CoV-2","AGACTTTAACAAGCAG",1,74.9,9.99,-0.78,0.08,2.4,1,0,">1 nonsynonymous","R25T G196R",2
"lib1","SARS-CoV-2","AGACTTTAACGCTGTA",1,63.26,10.7,-0.06,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGACTTTAATCATAAA",1,15.12,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T46S Y93W",2
"lib1","SARS-CoV-2","AGACTTTACCCGCGGT",1,23.9,9.69,-1.07,0.12,1.97,1.13,0.01,">1 nonsynonymous","D34T D90H",2
"lib1","SARS-CoV-2","AGACTTTGATTCAGGG",6,16.55,10.51,-0.25,0.07,2.89,1,0,">1 nonsynonymous","V37G K56Y",2
"lib1","SARS-CoV-2","AGACTTTGTTAAAAAA",2,17.12,9.17,-1.6,0.23,1.93,1.08,0.02,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","AGACTTTTAGCCCACC",9,116.1,10.72,-0.05,0.06,2.95,1.03,0,"1 nonsynonymous","N64F",1
"lib1","SARS-CoV-2","AGACTTTTCTGTATAA",8,33.71,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","A67H P82R Y91H D112F G146R",5
"lib1","SARS-CoV-2","AGACTTTTGGCAACGA",13,136.68,9.21,-1.56,0.08,2.74,1.18,0,">1 nonsynonymous","G117E T201M",2
"lib1","SARS-CoV-2","AGACTTTTTAGTGAAT",3,89.12,9.25,-1.51,0.08,2.72,1.13,0,">1 nonsynonymous","V103T N120E L125A",3
"lib1","SARS-CoV-2","AGAGAAAAAAATGGAA",3,94.24,10.34,-0.42,0.05,2.86,1.03,0,">1 nonsynonymous","G9M Q144H",2
"lib1","SARS-CoV-2","AGAGAAAAAGCATTTT",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H D90S T100N W106L",4
"lib1","SARS-CoV-2","AGAGAAAAATAAATTA",3,43.25,8.41,-2.36,0.23,1.95,1.15,0.02,">1 nonsynonymous","Y35C G117D K128A",3
"lib1","SARS-CoV-2","AGAGAAAAATATTAAT",5,41.88,9.46,-1.3,0.2,1.61,1.17,0.02,">1 nonsynonymous","T55N P96I",2
"lib1","SARS-CoV-2","AGAGAAAAATCCATCG",4,67.49,10.72,-0.04,0.05,2.88,1.06,0,">1 nonsynonymous","F8Y T85N",2
"lib1","SARS-CoV-2","AGAGAAAACGTACAGC",3,70.44,6.08,-4.69,0.79,1.5,1.11,0.02,">1 nonsynonymous","L38I N107G S129F G155Y",4
"lib1","SARS-CoV-2","AGAGAAAACTAGGACG",2,32.93,10.33,-0.44,0.07,2.89,1.02,0,">1 nonsynonymous","N130I G174Y",2
"lib1","SARS-CoV-2","AGAGAAAACTAGGCAA",6,39.41,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","C6Y D34L Q84M L122M P161R",5
"lib1","SARS-CoV-2","AGAGAAAAGGGCATAC",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G F47C V180S",3
"lib1","SARS-CoV-2","AGAGAAAAGGTGACCC",1,3.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","AGAGAAAATACAAAAC",5,33.33,6.77,-4,0.39,1.5,1.03,0.03,">1 nonsynonymous","P96R D112G N120F Y175L",4
"lib1","SARS-CoV-2","AGAGAAACAATATTAG",8,79.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G51C R73F",2
"lib1","SARS-CoV-2","AGAGAAACACTAAGCG",1,0.32,NA,NA,NA,NA,NA,NA,"stop","R25A D34Q C49S N64H I72L R127S E141* C158*",8
"lib1","SARS-CoV-2","AGAGAAACGTATATTT",4,62.14,9.75,-1.01,0.06,2.82,1.08,0,">1 nonsynonymous","N64T N118R",2
"lib1","SARS-CoV-2","AGAGAAAGACAGTGAT",6,55.65,10.82,0.06,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGAAAGACATACAT",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y K128Y E141L",3
"lib1","SARS-CoV-2","AGAGAAAGTAGCAGAA",1,14.42,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","K56C F70G D112E",3
"lib1","SARS-CoV-2","AGAGAAATATCTTCTC",2,6.99,10.81,0.05,0.08,3,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGAAATATGCGCGC",5,34.44,9.98,-0.79,0.06,2.66,1.04,0,">1 nonsynonymous","Y21M P149D",2
"lib1","SARS-CoV-2","AGAGAAATCAAGGGAC",4,21.91,6,-4.76,1.39,1.5,1.1,0.01,">1 nonsynonymous","G74C G83T L95R E141M",4
"lib1","SARS-CoV-2","AGAGAAATCTCTACAA",5,68.38,10.22,-0.54,0.09,2.13,1.01,0,"1 nonsynonymous","K94F",1
"lib1","SARS-CoV-2","AGAGAAATTTTCCGCA",4,44.42,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N107V N157I Q176W",3
"lib1","SARS-CoV-2","AGAGAACCACTTATAC",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74V L95E L122E K128S",4
"lib1","SARS-CoV-2","AGAGAACCAGCATAAA",4,75.05,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L5D T15N C61G V71C G86D S164D",6
"lib1","SARS-CoV-2","AGAGAACCTCGTGCTT",3,56.4,10.47,-0.3,0.07,2.84,1.05,0,">1 nonsynonymous","T100S Q163L A190S",3
"lib1","SARS-CoV-2","AGAGAACTCACCACAA",2,5.73,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","Q84R A105R",2
"lib1","SARS-CoV-2","AGAGAAGAAACCTTAG",6,15.17,8.66,-2.1,0.36,1.5,1,0.06,">1 nonsynonymous","N13M N64L Y91R",3
"lib1","SARS-CoV-2","AGAGAAGATAACTACT",1,69.81,10.27,-0.49,0.06,2.99,1.02,0,">1 nonsynonymous","T100F G166A",2
"lib1","SARS-CoV-2","AGAGAAGATAATTCCT",4,67.25,10.22,-0.54,0.05,2.68,1,0,">1 nonsynonymous","T3S Y39Q P96S T140V",4
"lib1","SARS-CoV-2","AGAGAAGATACTATAT",5,74.23,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","A33P G86R S129C",3
"lib1","SARS-CoV-2","AGAGAAGATCACCCTT",2,8.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51M A67S G101S Y178W",4
"lib1","SARS-CoV-2","AGAGAAGCCCATAAGG",1,30.25,9.9,-0.86,0.11,2.3,1.06,0,">1 nonsynonymous","P7E S69L",2
"lib1","SARS-CoV-2","AGAGAAGCCCCGAAGG",5,83.42,10.75,-0.01,0.08,2.86,1.07,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","AGAGAAGCCTAACCGG",5,46.54,6.71,-4.06,0.28,1.5,1.11,0.01,">1 nonsynonymous","C6E D112V",2
"lib1","SARS-CoV-2","AGAGAAGCTGATAACA",2,23.61,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","E10W A33Q S43I G117E I138Q",5
"lib1","SARS-CoV-2","AGAGAAGGAAATCCAC",2,22.01,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P7R A67N P82I W106F",4
"lib1","SARS-CoV-2","AGAGAAGGAGTTACAG",8,39.37,8.06,-2.7,0.29,1.5,1.07,0.03,">1 nonsynonymous","S19A A89Y",2
"lib1","SARS-CoV-2","AGAGAAGTCATAGAGA",4,2.99,NA,NA,NA,NA,NA,NA,"stop","S29F C61H D97N E154* N157I C195*",6
"lib1","SARS-CoV-2","AGAGAAGTTACACAAG",5,77.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27S I80P Y93E T140P C158I",5
"lib1","SARS-CoV-2","AGAGAATACAGATATA",1,59.75,10.68,-0.09,0.07,2.89,1.04,0,">1 nonsynonymous","F44T K56M P197A",3
"lib1","SARS-CoV-2","AGAGAATATACATACG",4,95.62,10.42,-0.35,0.04,2.91,1.04,0,">1 nonsynonymous","S164E G174N",2
"lib1","SARS-CoV-2","AGAGAATATGTCCTTG",2,18.79,10.14,-0.62,0.14,2.23,1,0.01,">1 nonsynonymous","G9K V52E T201S",3
"lib1","SARS-CoV-2","AGAGAATGGAGCAAAT",2,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26A S43W V103P T170E L183S A190R",6
"lib1","SARS-CoV-2","AGAGAATGGATTGTCG",5,35.5,9.96,-0.8,0.18,1.61,1.1,0.02,">1 nonsynonymous","D97A I104G Y123K",3
"lib1","SARS-CoV-2","AGAGAATGTAAAATTA",2,35.65,10.83,0.06,0.09,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAGAATGTTTTTTAG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","S45A L60A Q84* L111G A145L",5
"lib1","SARS-CoV-2","AGAGAATTAAGTGTAA",1,22.96,10.61,-0.16,0.09,2.77,1.15,0,">1 nonsynonymous","A42W P54E",2
"lib1","SARS-CoV-2","AGAGAATTTGAAAAAA",6,92.12,9.85,-0.92,0.12,1.99,1.09,0.01,">1 nonsynonymous","W23A T201R",2
"lib1","SARS-CoV-2","AGAGACAAAACACTGA",5,37.15,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F44L K94N N157Y",3
"lib1","SARS-CoV-2","AGAGACAAAAGACCCT",8,92.61,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L95I K114S K128Y Y165K",4
"lib1","SARS-CoV-2","AGAGACAAACAGAAAA",3,117.76,10.62,-0.15,0.04,2.9,1.06,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","AGAGACAAATAGTATC",5,43.18,10.57,-0.2,0.03,2.93,1.01,0,"1 nonsynonymous","A18T",1
"lib1","SARS-CoV-2","AGAGACAAATTTTTAG",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126A F167V",2
"lib1","SARS-CoV-2","AGAGACAAGCCACATA",4,20.25,10.86,0.1,0.22,2.7,1,0.01,">1 nonsynonymous","G51Q V173I",2
"lib1","SARS-CoV-2","AGAGACAAGGACAACC",2,28.33,9.14,-1.62,0.14,2.42,1.11,0.01,">1 nonsynonymous","N4D A14I R73A",3
"lib1","SARS-CoV-2","AGAGACAAGTGGACCA",7,107.39,9.82,-0.95,0.07,2.91,1.03,0,">1 nonsynonymous","Y119F S200D",2
"lib1","SARS-CoV-2","AGAGACAGCGTAATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V D34L Y50D S139L",4
"lib1","SARS-CoV-2","AGAGACAGGGGAAAGC",1,27.34,6.42,-4.34,0.73,1.5,1.12,0.06,">1 nonsynonymous","Y39P S69M N92Q E135G",4
"lib1","SARS-CoV-2","AGAGACAGTAAATATC",2,22.1,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F12L G74N W106N S184R",4
"lib1","SARS-CoV-2","AGAGACAGTCAAGAAT",3,77.03,8.89,-1.88,0.2,1.5,1.08,0.02,">1 nonsynonymous","L5D K26G A33R D97N",4
"lib1","SARS-CoV-2","AGAGACATTAACTCGT",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S Y121V",2
"lib1","SARS-CoV-2","AGAGACCAAAATGCAT",8,30.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D I88M V103R G117D A190V",5
"lib1","SARS-CoV-2","AGAGACCAGAGGATGG",3,94.82,10.64,-0.13,0.06,2.91,1.04,0,"1 nonsynonymous","G51Q",1
"lib1","SARS-CoV-2","AGAGACCAGCTTTGTA",2,100.82,10.38,-0.38,0.05,2.94,1.02,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","AGAGACCATTGGAAAT",2,8.62,10.63,-0.13,0.06,2.99,1,0,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","AGAGACCCAATTACTT",4,74.59,10.51,-0.26,0.07,2.96,1.05,0,">1 nonsynonymous","N109L N151K",2
"lib1","SARS-CoV-2","AGAGACCCCAACCGTG",3,43.42,10.55,-0.21,0.06,2.92,1.02,0,">1 nonsynonymous","N120L I142L",2
"lib1","SARS-CoV-2","AGAGACCCCAAGCCCA",4,73.17,10.02,-0.75,0.05,2.57,1.03,0,">1 nonsynonymous","A14V N120L",2
"lib1","SARS-CoV-2","AGAGACCTGACATTCT",7,22.79,6,-4.76,0.99,1.5,1.23,0.02,">1 nonsynonymous","L95R Y123M P169H P197A",4
"lib1","SARS-CoV-2","AGAGACGATAAATAAG",11,12.38,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Q84V L183D",2
"lib1","SARS-CoV-2","AGAGACGATCTCACGA",7,0.1,NA,NA,NA,NA,NA,NA,"stop","D68* F134S",2
"lib1","SARS-CoV-2","AGAGACGCCTCGCAAG",8,2.04,NA,NA,NA,NA,NA,NA,"stop","E10T V77M E141*",3
"lib1","SARS-CoV-2","AGAGACGGAGTGGAAA",9,196.59,10.66,-0.1,0.03,2.92,1.01,0,"1 nonsynonymous","A14K",1
"lib1","SARS-CoV-2","AGAGACGGCGCAAGAA",4,39.57,6,-4.76,1.91,1.5,1.14,0.01,">1 nonsynonymous","C6R K56L C61K D68R G101L S108T F160L",7
"lib1","SARS-CoV-2","AGAGACGGTATGAAAA",1,25.85,10.4,-0.37,0.12,2.79,1.18,0.01,">1 nonsynonymous","S43P D90S",2
"lib1","SARS-CoV-2","AGAGACGTTTACTCAA",5,128.75,10.64,-0.12,0.03,2.97,1,0,">1 nonsynonymous","C61R G83C",2
"lib1","SARS-CoV-2","AGAGACTAAAACACTT",2,1.58,NA,NA,NA,NA,NA,NA,"stop","R16L G51R D90Y D137* P149L",5
"lib1","SARS-CoV-2","AGAGACTAATGGATCT",3,0.13,NA,NA,NA,NA,NA,NA,"stop","N4V S41V V77* A89H K128T",5
"lib1","SARS-CoV-2","AGAGACTCACGCTGTG",5,75.76,8.76,-2,0.22,2.22,1.09,0.02,">1 nonsynonymous","I2L G146L",2
"lib1","SARS-CoV-2","AGAGACTCATAATCCG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","A18L N64* E135T C158P",4
"lib1","SARS-CoV-2","AGAGACTCTATAAAAA",3,44.66,10.68,-0.09,0.05,2.93,1.04,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","AGAGACTCTGCTGTAT",5,21.34,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","V71A N120W S139N G166R",4
"lib1","SARS-CoV-2","AGAGACTGAGTAGTCT",4,97.11,10.03,-0.74,0.09,2.39,1.04,0,">1 nonsynonymous","V11P S200F",2
"lib1","SARS-CoV-2","AGAGACTTCGAAGAAT",4,0.63,NA,NA,NA,NA,NA,NA,"stop","R78* V173A",2
"lib1","SARS-CoV-2","AGAGAGAACAAAATTA",5,24.64,6.56,-4.2,0.48,1.5,1.06,0.06,">1 nonsynonymous","P54L Y93R",2
"lib1","SARS-CoV-2","AGAGAGAACAAATTTC",8,129.28,8.52,-2.25,0.16,1.8,1.12,0.01,">1 nonsynonymous","F62S K132L G146M",3
"lib1","SARS-CoV-2","AGAGAGAATACTAAAG",3,9.76,6.2,-4.56,1.89,3,1.22,0.01,">1 nonsynonymous","S45D I88F N120L T170S S200I",5
"lib1","SARS-CoV-2","AGAGAGAATAGCTTAC",8,94.03,9.91,-0.86,0.08,2.25,1.04,0,">1 nonsynonymous","T15V A81S K132L F160W",4
"lib1","SARS-CoV-2","AGAGAGAATCAAAGAT",3,20.39,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6N K26M S41P C61L D97F N118K F167H",7
"lib1","SARS-CoV-2","AGAGAGACCCTCAGTT",6,51.84,10.77,0.01,0.12,2.79,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGAGACCTGAATGT",8,203.97,10.73,-0.04,0.07,2.89,1.09,0,"1 nonsynonymous","I28M",1
"lib1","SARS-CoV-2","AGAGAGATATCCCAAG",5,51.37,10.7,-0.06,0.06,2.86,1.09,0,">1 nonsynonymous","L122W I138T",2
"lib1","SARS-CoV-2","AGAGAGCAGGAAAAAT",9,0.88,NA,NA,NA,NA,NA,NA,"stop","P82D S129Y R136*",3
"lib1","SARS-CoV-2","AGAGAGCCACCAATAA",1,26.71,9.2,-1.56,0.06,2.84,1.08,0,">1 nonsynonymous","G146R Q168Y G174P",3
"lib1","SARS-CoV-2","AGAGAGCTGTGAAACA",4,45.68,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90N G155H P161R",3
"lib1","SARS-CoV-2","AGAGAGCTTCCAACCG",1,10.12,9.49,-1.28,0.37,1.5,1,0.06,">1 nonsynonymous","A14Q D34L T55F Y121L",4
"lib1","SARS-CoV-2","AGAGAGGAAAGGAGCT",1,32.37,9.96,-0.81,0.09,2.4,1,0,">1 nonsynonymous","T15Y T55R S129G I142M",4
"lib1","SARS-CoV-2","AGAGAGGATATATAAC",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P D112T F134D G155R",4
"lib1","SARS-CoV-2","AGAGAGGATCGCCCTT",3,15.69,9.75,-1.02,0.21,1.54,1.06,0.03,">1 nonsynonymous","K94Q Y123V",2
"lib1","SARS-CoV-2","AGAGAGGCAACTAGAG",2,48.31,10.45,-0.31,0.05,2.87,1.02,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","AGAGAGGCGGTTCTCT",2,36.7,10.72,-0.05,0.07,2.9,1.06,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","AGAGAGGGAATTCTTT",11,1.06,NA,NA,NA,NA,NA,NA,"stop","T15R K87* N107G",3
"lib1","SARS-CoV-2","AGAGAGGGTGAATTCT",2,43.41,10.26,-0.51,0.07,2.94,1.05,0,">1 nonsynonymous","G174R K199N",2
"lib1","SARS-CoV-2","AGAGAGGTTCTTACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P F62T G146L",3
"lib1","SARS-CoV-2","AGAGAGTAATGCAAGT",8,129.51,6,-4.76,2,2.31,1.13,0,">1 nonsynonymous","R27G E141Q C158I",3
"lib1","SARS-CoV-2","AGAGAGTACACGTTTG",3,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N F99Y N157R",3
"lib1","SARS-CoV-2","AGAGAGTTCTAAGTTT",13,162.03,9.05,-1.72,0.15,1.5,1.1,0.01,">1 nonsynonymous","G51I P149R G155A",3
"lib1","SARS-CoV-2","AGAGAGTTGATAAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","R16L W23* V37D K128F",4
"lib1","SARS-CoV-2","AGAGATAAAACTTTAC",7,143.56,10.74,-0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATAAACAAGCAC",11,171.09,10.72,-0.05,0.05,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGAGATAAACTCCAAA",5,76.75,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38T F99L F126R",3
"lib1","SARS-CoV-2","AGAGATAAGGCAATAG",4,77.68,10.53,-0.23,0.07,2.83,1.03,0,"1 nonsynonymous","P133G",1
"lib1","SARS-CoV-2","AGAGATACCGGTCCTG",2,16.14,10.66,-0.1,0.08,2.95,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATACCTTATATG",2,5.3,10.18,-0.59,0.34,1.59,1.02,0.04,">1 nonsynonymous","A67H K128T T201Y",3
"lib1","SARS-CoV-2","AGAGATACGCCTGCTG",8,60.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23V N107I",2
"lib1","SARS-CoV-2","AGAGATAGAATTATTA",7,35.36,6,-4.76,1,1.5,1.17,0.01,">1 nonsynonymous","A14D G83V D112P C150Y",4
"lib1","SARS-CoV-2","AGAGATAGAATTGATC",16,83.24,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","I28E L60V T170A V181E",4
"lib1","SARS-CoV-2","AGAGATAGCAATATCA",1,14.41,6,-4.76,2,3,1.32,0.07,">1 nonsynonymous","I2D I80T F99N W106R T140L P161L",6
"lib1","SARS-CoV-2","AGAGATAGCCTATACC",11,187.07,10.75,-0.01,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATAGGAGTTGGA",2,20.5,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C49H K56D P82T",3
"lib1","SARS-CoV-2","AGAGATATGTAAAACA",3,32.42,6,-4.76,1.27,1.5,1.17,0.02,">1 nonsynonymous","W23L G83M K94E P197E",4
"lib1","SARS-CoV-2","AGAGATATTTTTGTTC",2,21.42,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","F47G Q84M D97I Y143S P161T K198Y",6
"lib1","SARS-CoV-2","AGAGATCACCGAGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45H I104L G155D",3
"lib1","SARS-CoV-2","AGAGATCAGGAAAGGA",4,20.29,9.9,-0.86,0.13,2.26,1.04,0.01,">1 nonsynonymous","F8C S200Q",2
"lib1","SARS-CoV-2","AGAGATCAGTACCCGT",9,16.47,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","C61T V77R V103A Y119T",4
"lib1","SARS-CoV-2","AGAGATCCAGTTGTAT",3,11.16,10.8,0.04,0.09,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATCCATACGTCA",3,94.43,9.23,-1.54,0.13,2.59,1.13,0.01,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","AGAGATCCGCTGATGT",1,10.12,6,-4.76,2,1.5,1.3,0.08,">1 nonsynonymous","V37N N64S G83Y N92W",4
"lib1","SARS-CoV-2","AGAGATCTATAAACAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R F134S",2
"lib1","SARS-CoV-2","AGAGATCTCGATCTTA",7,93.12,10.56,-0.21,0.04,2.87,1.02,0,">1 nonsynonymous","K26M N64H I142T",3
"lib1","SARS-CoV-2","AGAGATGAAAACCTAA",2,55.72,9.75,-1.02,0.06,2.89,1.05,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","AGAGATGAGTAGCAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","I138T K199*",2
"lib1","SARS-CoV-2","AGAGATGCAATGCCGC",3,18.97,6,-4.76,2,1.74,1.46,0.04,">1 nonsynonymous","S19I Y91L P197E",3
"lib1","SARS-CoV-2","AGAGATGCGTACTAAA",2,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70Y Y91L N130F I138M",4
"lib1","SARS-CoV-2","AGAGATGTGCGGCATA",2,7.22,7.91,-2.85,0.47,1.5,1.03,0.08,">1 nonsynonymous","D68E T140L A145Q G166V",4
"lib1","SARS-CoV-2","AGAGATGTGGTAAAAC",4,42.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9S N30S D90R E135R G146M",5
"lib1","SARS-CoV-2","AGAGATGTTCTCAACG",5,68.6,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G9Y R27K I28S S41M R124A G146L",6
"lib1","SARS-CoV-2","AGAGATGTTTTCATAA",8,70.36,10.02,-0.74,0.12,2.06,1.05,0.01,">1 nonsynonymous","E76T T100R",2
"lib1","SARS-CoV-2","AGAGATTAATAGCAAT",3,20.77,6.17,-4.6,0.76,1.5,1.18,0.02,">1 nonsynonymous","V20R K128W I138R",3
"lib1","SARS-CoV-2","AGAGATTACGATAAAG",3,34.46,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","A42K C61S K87W D90L K128T R136I G146L S200Y",8
"lib1","SARS-CoV-2","AGAGATTACGTGCACG",4,30.93,7.42,-3.34,0.38,1.5,1.16,0.03,">1 nonsynonymous","A105K I142L",2
"lib1","SARS-CoV-2","AGAGATTATACTATAG",11,243.11,10.74,-0.03,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATTATTAATATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A C61R G172R A190E",4
"lib1","SARS-CoV-2","AGAGATTCCATAAGAG",7,8.6,NA,NA,NA,NA,NA,NA,"stop","I104H K128* G155S",3
"lib1","SARS-CoV-2","AGAGATTCGAATCAGC",1,1.42,NA,NA,NA,NA,NA,NA,"stop","F134* F167V",2
"lib1","SARS-CoV-2","AGAGATTGGAGACACA",7,91.19,6,-4.76,0.78,1.5,1.2,0.01,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","AGAGATTGGCCACAAT",5,68,10.76,-0.01,0.06,2.97,1.01,0,"1 nonsynonymous","V37T",1
"lib1","SARS-CoV-2","AGAGATTTATGTATCT",2,21.65,10.75,-0.01,0.1,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGATTTGGCACACT",2,74.63,10.77,0,0.05,2.89,1.02,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","AGAGATTTTAACCATC",3,37.44,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P7L I88E",2
"lib1","SARS-CoV-2","AGAGATTTTACAAACG",3,30.1,10.67,-0.1,0.09,2.86,1.14,0,"1 nonsynonymous","N151L",1
"lib1","SARS-CoV-2","AGAGCAAAAGTGGATA",2,31.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L T100S Y165G",3
"lib1","SARS-CoV-2","AGAGCAAACATGACGT",2,1.52,NA,NA,NA,NA,NA,NA,"stop","L60T I88L Y178*",3
"lib1","SARS-CoV-2","AGAGCAAATATACGTT",8,28.34,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y91N F99N I142S",3
"lib1","SARS-CoV-2","AGAGCAACCAAACATT",6,111.24,10.45,-0.31,0.03,2.89,1.03,0,">1 nonsynonymous","G9Y L95M",2
"lib1","SARS-CoV-2","AGAGCAAGCAAAGCGG",5,84.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K87E D98R A105G N157I",4
"lib1","SARS-CoV-2","AGAGCAATGACAGGGA",2,58.3,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12I W106I Y143T V180E",4
"lib1","SARS-CoV-2","AGAGCAATGATACAAT",2,137.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S36N D90C N109R Y121I Y178D",5
"lib1","SARS-CoV-2","AGAGCACACCATAAGC",5,53.75,9.81,-0.95,0.11,2.28,1.03,0,">1 nonsynonymous","N4S Y35S T100S",3
"lib1","SARS-CoV-2","AGAGCACAGCGACAAT",4,143.11,8.01,-2.75,0.15,1.62,1.14,0.01,">1 nonsynonymous","S113L E141G",2
"lib1","SARS-CoV-2","AGAGCACATAACGAAC",4,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H Y91R V173G",3
"lib1","SARS-CoV-2","AGAGCACCATCAACGC",7,36.04,10.72,-0.04,0.05,2.99,1.01,0,">1 nonsynonymous","I2R L38F",2
"lib1","SARS-CoV-2","AGAGCACTGTGCATGC",8,1887.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17R S36R W106L",3
"lib1","SARS-CoV-2","AGAGCAGCCACAGAAT",3,74.57,8.03,-2.73,0.16,1.5,1.11,0.01,">1 nonsynonymous","C61F K87T S113A Y119L T140D S184F",6
"lib1","SARS-CoV-2","AGAGCAGCGCTCTCGG",2,16.39,6.66,-4.1,0.62,1.5,1.1,0.06,">1 nonsynonymous","K94A Q168P",2
"lib1","SARS-CoV-2","AGAGCAGCTCCCGAAG",1,16.15,10,-0.77,0.2,2.2,1,0.01,">1 nonsynonymous","N13S R27M I104Y N120G",4
"lib1","SARS-CoV-2","AGAGCAGGGTCTCACT",2,47.72,10.37,-0.4,0.05,2.83,1.03,0,"1 nonsynonymous","E135N",1
"lib1","SARS-CoV-2","AGAGCAGGTACAATTT",4,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85C D137H",2
"lib1","SARS-CoV-2","AGAGCATAAGTGTGAC",6,105.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F17T S29K L125S P177E",4
"lib1","SARS-CoV-2","AGAGCATACAATAACG",9,6.92,NA,NA,NA,NA,NA,NA,"stop","Y123* L187F",2
"lib1","SARS-CoV-2","AGAGCATCCACTGCTC",5,74.89,6,-4.76,1.99,1.5,1.22,0.03,">1 nonsynonymous","A18G C102W",2
"lib1","SARS-CoV-2","AGAGCATGGAGCGTAT",9,79.76,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N13L N24L V37L Y50L I88L L95M T201A",7
"lib1","SARS-CoV-2","AGAGCCAAACACACGA",7,186.1,9.37,-1.4,0.12,2.56,1.1,0.01,">1 nonsynonymous","T100A L122H Y143L A192I",4
"lib1","SARS-CoV-2","AGAGCCAAATTTTCCA",1,59.46,9.76,-1.01,0.12,2.26,1.15,0,">1 nonsynonymous","D34G L60K",2
"lib1","SARS-CoV-2","AGAGCCAACAACTCTA",4,51.8,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I2R S29V N92M S164N",4
"lib1","SARS-CoV-2","AGAGCCAAGACAGCAA",2,66.96,10.09,-0.67,0.07,2.31,1.05,0,">1 nonsynonymous","R27Y A81M T100Y",3
"lib1","SARS-CoV-2","AGAGCCAATACGGCGT",3,0.7,NA,NA,NA,NA,NA,NA,"stop","G9* R73M K114R Y143T",4
"lib1","SARS-CoV-2","AGAGCCATTAAGGCGG",4,0.75,NA,NA,NA,NA,NA,NA,"stop","F17A S41Q S45A T85* Y119I Q163P G174P",7
"lib1","SARS-CoV-2","AGAGCCATTTAAAAAT",4,33.87,10.78,0.02,0.05,2.94,1.04,0,"1 nonsynonymous","T55Q",1
"lib1","SARS-CoV-2","AGAGCCCACTTTACTA",3,102.49,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F62K C158E",2
"lib1","SARS-CoV-2","AGAGCCCCCGCCATAT",1,49.09,10.22,-0.54,0.08,2.06,1,0,">1 nonsynonymous","N40R A89H S147P",3
"lib1","SARS-CoV-2","AGAGCCCGAAGAGAAT",4,1.96,NA,NA,NA,NA,NA,NA,"stop","S36G Y93W G116A N171* V181T",5
"lib1","SARS-CoV-2","AGAGCCCTTCGACATG",2,15.08,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S53Y V65F I88D N130S",4
"lib1","SARS-CoV-2","AGAGCCGAAAGATGAA",8,5.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N107S K114N I138K",3
"lib1","SARS-CoV-2","AGAGCCGCAGCCCAGC",1,14.3,8.57,-2.19,0.13,1.92,1.08,0.01,">1 nonsynonymous","S69K T85V",2
"lib1","SARS-CoV-2","AGAGCCGGTCCAATGC",2,23.58,6,-4.76,2,1.99,1.31,0.03,">1 nonsynonymous","K48F G86M",2
"lib1","SARS-CoV-2","AGAGCCTCTCTTGATT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","R25* E76F R136L A145F",4
"lib1","SARS-CoV-2","AGAGCGAAAACTAGAC",2,30.49,6.05,-4.72,0.51,1.5,1.09,0.01,">1 nonsynonymous","F62T K114F Y121H A145S N157M",5
"lib1","SARS-CoV-2","AGAGCGAAGACAAAAT",3,13.68,6,-4.76,2,3,1.13,0.02,">1 nonsynonymous","F12D N92T Q144H",3
"lib1","SARS-CoV-2","AGAGCGACTTGCATGA",3,44.98,10.42,-0.34,0.05,2.95,1,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","AGAGCGATAAATAATG",5,10.41,6.34,-4.43,0.22,1.5,1.09,0,">1 nonsynonymous","P161C S184R",2
"lib1","SARS-CoV-2","AGAGCGCTACCCTTAG",1,10.04,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V20K R27L Y39R F47L D97F K114T",6
"lib1","SARS-CoV-2","AGAGCGCTTAAAGTAT",9,103.22,8.42,-2.34,0.14,2.66,1.06,0.01,">1 nonsynonymous","N24R S41Y G146K G152T",4
"lib1","SARS-CoV-2","AGAGCGGAACTAATCA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F8Y F17G T55C D75R W106*",5
"lib1","SARS-CoV-2","AGAGCGGACTATTGAG",3,60.36,9.56,-1.21,0.08,2.84,1.13,0,">1 nonsynonymous","L60C Y119S",2
"lib1","SARS-CoV-2","AGAGCGGCATTCTACA",3,43.5,6.3,-4.46,0.84,1.5,1.33,0.04,">1 nonsynonymous","N4S V52N V65S D98H G166V",5
"lib1","SARS-CoV-2","AGAGCGTTACTGGGCT",7,86.25,10.8,0.03,0.05,2.92,1.04,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","AGAGCTAACGAAATAT",1,6.95,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88F N107G",2
"lib1","SARS-CoV-2","AGAGCTACCAGAGTAG",3,27.99,9.24,-1.52,0.2,2.03,1.24,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AGAGCTACGTATCTCC",5,87.25,10.76,0,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGCTACTGCTGACA",8,47.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20S K94G",2
"lib1","SARS-CoV-2","AGAGCTAGAATGCCAT",4,71.76,10.58,-0.19,0.05,2.9,1.05,0,">1 nonsynonymous","F8W G116A",2
"lib1","SARS-CoV-2","AGAGCTCACCAACCCA",6,0.47,NA,NA,NA,NA,NA,NA,"stop","A22I V77* V103R",3
"lib1","SARS-CoV-2","AGAGCTCCTACTGCAA",2,65.02,10.68,-0.09,0.05,2.91,1.05,0,">1 nonsynonymous","V37Y N120H N151L",3
"lib1","SARS-CoV-2","AGAGCTCTTCACGCGT",1,18.27,10.46,-0.3,0.11,2.89,1.02,0.01,">1 nonsynonymous","Y123L G174S",2
"lib1","SARS-CoV-2","AGAGCTGGAAAGTAAA",3,8.51,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","C6M N24H G116R P161S",4
"lib1","SARS-CoV-2","AGAGCTGGGTCCATGC",2,24.95,6,-4.76,2,3,1.12,0,">1 nonsynonymous","P7I K132I N157M",3
"lib1","SARS-CoV-2","AGAGCTTAAAGATGCC",2,0.45,NA,NA,NA,NA,NA,NA,"stop","F8L Q84* Q168N",3
"lib1","SARS-CoV-2","AGAGCTTGAAAAGAGT",1,26,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S19F F99I W106V I138S",4
"lib1","SARS-CoV-2","AGAGCTTTAAGAATGA",4,7.72,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13R A89W",2
"lib1","SARS-CoV-2","AGAGGAAAACACTGGA",3,0.95,NA,NA,NA,NA,NA,NA,"stop","L57S A145N G155T Q163*",4
"lib1","SARS-CoV-2","AGAGGAAAATAATAAC",3,7.16,10.05,-0.72,0.1,3,1.02,0,">1 nonsynonymous","L60T T85Y",2
"lib1","SARS-CoV-2","AGAGGAAAATCTGAGC",4,23.63,7.07,-3.7,0.53,1.5,1.14,0.08,">1 nonsynonymous","F62Y L95Y V103H",3
"lib1","SARS-CoV-2","AGAGGAAAATTTTATA",6,234.64,10.63,-0.13,0.04,2.91,1.04,0,"1 nonsynonymous","L95M",1
"lib1","SARS-CoV-2","AGAGGAAACTTACAAC",1,32.31,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6W Q176E P197T",3
"lib1","SARS-CoV-2","AGAGGAACACAGAAAT",11,3.81,NA,NA,NA,NA,NA,NA,"stop","D59S A81S I138L G172I R179*",5
"lib1","SARS-CoV-2","AGAGGAACAGAACATA",7,82.76,6.29,-4.48,0.59,1.5,1.2,0.02,">1 nonsynonymous","V52C Q84W T170R C195S K199Y",5
"lib1","SARS-CoV-2","AGAGGAAGTACCAACA",5,47.46,6.31,-4.45,0.47,1.5,1.1,0.02,">1 nonsynonymous","E10M C31K P82Y D97A F134R P149T L162P",7
"lib1","SARS-CoV-2","AGAGGAATTACACCAA",11,170.8,10.73,-0.03,0.06,2.82,1.07,0,">1 nonsynonymous","K128Q P149S",2
"lib1","SARS-CoV-2","AGAGGACACAGTATCT",1,13.04,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","N4S Y121D Q144I P197R",4
"lib1","SARS-CoV-2","AGAGGACACCGCCAAG",11,173.24,9.99,-0.78,0.05,2.71,1.04,0,">1 nonsynonymous","K48E G155I",2
"lib1","SARS-CoV-2","AGAGGACTCCTTTTTA",4,47.39,10.36,-0.4,0.08,2.8,1.03,0,">1 nonsynonymous","N130S F134L N151E",3
"lib1","SARS-CoV-2","AGAGGACTGTACATAA",6,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L W106V G117V G174T K198T",5
"lib1","SARS-CoV-2","AGAGGAGAGTAAGCAA",5,120.8,9.63,-1.13,0.07,2.68,1.08,0,">1 nonsynonymous","K87E S139E",2
"lib1","SARS-CoV-2","AGAGGAGCATATAGCT",3,83.67,10.76,0,0.11,2.83,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGGAGCTCATTAAC",2,9.29,9.73,-1.03,0.2,2.64,1.09,0.01,">1 nonsynonymous","C31S Y39K",2
"lib1","SARS-CoV-2","AGAGGAGGATTCTAGG",1,13.11,6.03,-4.73,0.87,1.5,1.11,0.02,">1 nonsynonymous","Y39L T55V R73L Y93W T170S",5
"lib1","SARS-CoV-2","AGAGGATACTTACAGC",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S36P D68V I80V G101E",5
"lib1","SARS-CoV-2","AGAGGATCAAGGTATG",3,0.15,NA,NA,NA,NA,NA,NA,"stop","F17A R25* V32E D59V D98G K132A N171R",7
"lib1","SARS-CoV-2","AGAGGATCAATGCCAA",10,46.81,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","S43W C49L V103N T170R F185I",5
"lib1","SARS-CoV-2","AGAGGATCTACAGCAA",2,126.13,10.76,0,0.06,2.93,1.03,0,"1 nonsynonymous","S164M",1
"lib1","SARS-CoV-2","AGAGGATGCAAGCAAG",7,74.74,10.71,-0.05,0.06,2.95,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AGAGGATTTATCAAAA",10,68.51,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N58F P149H Y165L V173F",4
"lib1","SARS-CoV-2","AGAGGATTTCAAATAT",3,27.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6M V103T T201R",3
"lib1","SARS-CoV-2","AGAGGCAAAATCTCCT",1,28.17,10.75,-0.02,0.06,2.99,1.02,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","AGAGGCAGAAATATTA",2,26.41,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I28L C49S R73A N92I F99M T201Y",6
"lib1","SARS-CoV-2","AGAGGCAGTGCCTTTA",4,91.82,8.9,-1.87,0.17,1.71,1.18,0.01,">1 nonsynonymous","C31N F62M T85L",3
"lib1","SARS-CoV-2","AGAGGCCAATTGACAG",2,38.42,10.36,-0.4,0.07,2.75,1.01,0,"1 nonsynonymous","Q144I",1
"lib1","SARS-CoV-2","AGAGGCCCCATGCATT",5,21.31,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S69R K87D L95F F134D Q144S F185V",6
"lib1","SARS-CoV-2","AGAGGCCGCAGGTAGA",3,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R S69Y V173P R179A",4
"lib1","SARS-CoV-2","AGAGGCGAAACTTAAC",3,84.66,10.06,-0.71,0.11,2.16,1.11,0.01,">1 nonsynonymous","W106V V153R",2
"lib1","SARS-CoV-2","AGAGGCGAGCTAAACA",2,30.51,10.83,0.07,0.09,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGGCGATTAAAAAA",1,60.81,10.51,-0.25,0.05,2.87,1.05,0,">1 nonsynonymous","T55A S129M",2
"lib1","SARS-CoV-2","AGAGGCGCGTTCACAG",3,6.53,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","N1S C6R S36E T46S W106R N118D T201D",7
"lib1","SARS-CoV-2","AGAGGCTAAACGATCT",1,13.98,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A33S A42E Y66V A89L D112L",5
"lib1","SARS-CoV-2","AGAGGCTATCCGCTAT",1,41,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T15E N30A D68L I138N A192C",5
"lib1","SARS-CoV-2","AGAGGCTCAAGATCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S I80K",2
"lib1","SARS-CoV-2","AGAGGCTCGAAGCTAA",8,61.35,10.53,-0.23,0.03,2.92,1.01,0,">1 nonsynonymous","D98Y N151G",2
"lib1","SARS-CoV-2","AGAGGCTGGAAATCTA",1,25.56,6.05,-4.72,0.74,2.15,1.19,0.01,">1 nonsynonymous","C61V C150Y E154S",3
"lib1","SARS-CoV-2","AGAGGCTTACTTTGAT",4,143.4,9.16,-1.6,0.05,2.81,1.13,0,">1 nonsynonymous","I2L T100L Y119D S129F",4
"lib1","SARS-CoV-2","AGAGGGACCTTTTCCT",2,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55F N58F A105S L122Y",4
"lib1","SARS-CoV-2","AGAGGGAGATGAGAAC",1,11.87,10.72,-0.04,0.12,2.93,1.01,0.01,">1 nonsynonymous","N64H G174S",2
"lib1","SARS-CoV-2","AGAGGGAGTACTTAAC",1,35.34,10.27,-0.49,0.08,2.83,1.07,0,">1 nonsynonymous","F12I N120Q T140G",3
"lib1","SARS-CoV-2","AGAGGGATCATCAGCA",5,17.17,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","N92I",1
"lib1","SARS-CoV-2","AGAGGGATGGTATAGA",4,10.06,8.04,-2.72,0.4,1.5,1.02,0.07,">1 nonsynonymous","N24A V103C",2
"lib1","SARS-CoV-2","AGAGGGCAACAGACGG",6,35.1,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F99S A105Y",2
"lib1","SARS-CoV-2","AGAGGGCATAGAAAGT",4,47.24,6.03,-4.73,0.97,1.5,1.19,0.02,">1 nonsynonymous","F44Q G116A K128S P133N V173W",5
"lib1","SARS-CoV-2","AGAGGGCTAGGCCAAC",4,129.28,10.01,-0.75,0.09,2.4,1.04,0,">1 nonsynonymous","S45W I104L",2
"lib1","SARS-CoV-2","AGAGGGCTGATAGACT",10,127.93,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F70H Y93S K114Q R124L",4
"lib1","SARS-CoV-2","AGAGGGCTTAACATGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120E P133A",2
"lib1","SARS-CoV-2","AGAGGGGGTCAAACGC",3,31.44,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I72F F126L",2
"lib1","SARS-CoV-2","AGAGGGGGTCGACGAT",1,21.08,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","D59P Y143K",2
"lib1","SARS-CoV-2","AGAGGGGTTTCTCCCC",6,50.14,10.38,-0.38,0.05,2.87,1.01,0,">1 nonsynonymous","A67C N120F",2
"lib1","SARS-CoV-2","AGAGGGTAAGGATCTC",6,71.74,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T3A C6E E10K T63I Y91R",5
"lib1","SARS-CoV-2","AGAGGGTGACCCACGA",3,54.09,6.4,-4.36,0.27,1.5,1.12,0.01,">1 nonsynonymous","Y39N G86T S129M I138W T148N",5
"lib1","SARS-CoV-2","AGAGGTAAAATACTCA",2,6.5,9.82,-0.94,0.07,2.93,1.09,0,">1 nonsynonymous","G9C L60S K87I T140H",4
"lib1","SARS-CoV-2","AGAGGTAGTCGTGCCT",1,6.33,10.23,-0.53,0.06,2.97,1,0,">1 nonsynonymous","D90G T100F N130V V173E",4
"lib1","SARS-CoV-2","AGAGGTATCACGTATA",5,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I T55L L95H V103R G117D",5
"lib1","SARS-CoV-2","AGAGGTATGAACTTTT",1,22.48,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A18G V77L F99S Y119L S129W",5
"lib1","SARS-CoV-2","AGAGGTCAAACATAAT",3,8.28,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y39R V65R K87Y F99S G117N S129T T201N",7
"lib1","SARS-CoV-2","AGAGGTCACGAGGGTG",5,34.18,6,-4.76,2,3,1.21,0,">1 nonsynonymous","F17S Y50P L122P N151I",4
"lib1","SARS-CoV-2","AGAGGTCAGTAGTAAA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7D Y119S",2
"lib1","SARS-CoV-2","AGAGGTCCGTATGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31A V37* D97L F156Q Q163S P197T",6
"lib1","SARS-CoV-2","AGAGGTCTTAATTGCA",3,10.84,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","C6V N92K A105S S164M",4
"lib1","SARS-CoV-2","AGAGGTGAAGACTTCG",4,31.43,8.74,-2.02,0.12,1.6,1.11,0.02,">1 nonsynonymous","N1I T100G E154L",3
"lib1","SARS-CoV-2","AGAGGTGCCATCCTTA",6,36.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C61S G86F P161S R179K L187R",5
"lib1","SARS-CoV-2","AGAGGTTAACATCCAA",2,73.32,9.96,-0.8,0.1,2.03,1.07,0,">1 nonsynonymous","L38F A105I",2
"lib1","SARS-CoV-2","AGAGGTTAATAAAGGC",8,75.79,10.57,-0.2,0.05,2.9,1.03,0,"1 nonsynonymous","G116T",1
"lib1","SARS-CoV-2","AGAGGTTACAAACTCA",1,16.42,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V11I P82Q K87M I142N",4
"lib1","SARS-CoV-2","AGAGGTTACGCAGCTA",2,19.49,10.33,-0.43,0.06,2.89,1.03,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","AGAGGTTCCCCAGGGA",4,116.21,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S53R P54T G101M",3
"lib1","SARS-CoV-2","AGAGGTTTACCTGCGA",4,34.66,8.38,-2.38,0.25,1.55,1.13,0.02,">1 nonsynonymous","L60Y G86T D97I",3
"lib1","SARS-CoV-2","AGAGTAAAAGATCCGG",2,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51T",1
"lib1","SARS-CoV-2","AGAGTAAAAGGGATAA",2,58.25,6.2,-4.57,0.81,1.5,1.14,0.03,">1 nonsynonymous","K56L D90Y Y159R G166L P177S",5
"lib1","SARS-CoV-2","AGAGTAAAGCAAAAAT",7,69.34,8.34,-2.43,0.21,1.5,1.14,0.01,">1 nonsynonymous","Y35R N120V G152T",3
"lib1","SARS-CoV-2","AGAGTAAATCTCTTCC",2,62.45,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V77R S139A Y175V",3
"lib1","SARS-CoV-2","AGAGTAAATTCAGGCC",3,0.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132N",1
"lib1","SARS-CoV-2","AGAGTAACTACGAGTG",15,319.41,10.75,-0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTAAGAGAACATA",1,29.77,8.62,-2.15,0.21,1.69,1.21,0.02,">1 nonsynonymous","G9T T15R K87I T140K Y178K",5
"lib1","SARS-CoV-2","AGAGTAAGAGCTGGAC",2,10.57,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P54T L95G Y178D",3
"lib1","SARS-CoV-2","AGAGTAAGCATGAGAT",4,54.42,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Q84F N107F G146V",3
"lib1","SARS-CoV-2","AGAGTAATAATAGGAA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R P149T",2
"lib1","SARS-CoV-2","AGAGTAATAGAGCGAA",1,12.03,6.22,-4.54,0.38,3,1.09,0.01,">1 nonsynonymous","C6L C31H C49Y R73A N171Q R179N",6
"lib1","SARS-CoV-2","AGAGTAATATGATTTG",4,10.04,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R25K P82R L95D I104S I142Y",5
"lib1","SARS-CoV-2","AGAGTACAACCATTAA",2,3.48,NA,NA,NA,NA,NA,NA,"stop","S41* S69E P96M D112I N118L T148N",6
"lib1","SARS-CoV-2","AGAGTACACAGGAGTG",6,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L H189L",2
"lib1","SARS-CoV-2","AGAGTACAGCATCCTA",2,27.09,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L5P N40I C61A Y91V C158L",5
"lib1","SARS-CoV-2","AGAGTACATTAAAAGG",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39Q A89H E154L",3
"lib1","SARS-CoV-2","AGAGTACCACCCTTTT",2,17.65,6.08,-4.68,0.5,3,1.06,0.01,">1 nonsynonymous","I2H A14S D68S G86Y",4
"lib1","SARS-CoV-2","AGAGTACCAGAAGCTG",3,20.77,NA,NA,NA,NA,NA,NA,"stop","A81* C102E R136S",3
"lib1","SARS-CoV-2","AGAGTACGAGAAGAAC",6,38.91,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K48P Y93T",2
"lib1","SARS-CoV-2","AGAGTACTAGTACGGA",2,58.48,10.07,-0.7,0.04,2.96,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","AGAGTACTTTACTAAG",1,57.18,10.69,-0.07,0.06,2.89,1.07,0,"1 nonsynonymous","L60H",1
"lib1","SARS-CoV-2","AGAGTAGAGGGCCAAT",1,68.77,10.21,-0.56,0.04,2.96,1,0,">1 nonsynonymous","F62T P169H",2
"lib1","SARS-CoV-2","AGAGTAGCATGGCTCG",1,9.9,10.69,-0.07,0.05,3,1,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","AGAGTAGCCAGATATC",5,157.88,10.77,0,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTAGGGGTGCATA",6,42.33,6.01,-4.75,0.79,1.5,1.11,0.01,">1 nonsynonymous","T3A E141T C158H",3
"lib1","SARS-CoV-2","AGAGTATAACCAATCA",14,1904.73,10.72,-0.04,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTATACCAACCGA",1,13.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F62L W106E A192L P197K",5
"lib1","SARS-CoV-2","AGAGTATCAGTATAAC",2,9.4,10.94,0.18,0.13,2.77,1.12,0.01,"1 nonsynonymous","S29Q",1
"lib1","SARS-CoV-2","AGAGTATCGAAGTGTT",1,11.2,10.76,0,0.09,2.98,1,0,">1 nonsynonymous","L5N S41R",2
"lib1","SARS-CoV-2","AGAGTATTAAGGAAAT",7,84.77,10.21,-0.55,0.05,2.75,1.04,0,">1 nonsynonymous","T55P K132C T148M",3
"lib1","SARS-CoV-2","AGAGTATTATAACACA",2,16.1,7.03,-3.73,0.59,1.5,1.23,0.06,">1 nonsynonymous","F44V I88L F160I",3
"lib1","SARS-CoV-2","AGAGTATTCTTACTCG",1,26.47,6,-4.76,0.95,1.5,1.15,0.01,">1 nonsynonymous","T63D W106C N118L G174K",4
"lib1","SARS-CoV-2","AGAGTATTTGGGCGTA",1,57.88,9.88,-0.88,0.15,2.25,1.05,0.01,">1 nonsynonymous","K48N N58F N120Y",3
"lib1","SARS-CoV-2","AGAGTCAAAACTGCGA",2,18.93,10.85,0.08,0.14,2.82,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTCAAGCCTGGAA",4,58.93,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G9V F167E",2
"lib1","SARS-CoV-2","AGAGTCAATTGAAAAA",5,83.47,7.98,-2.78,0.2,2.3,1.13,0.02,">1 nonsynonymous","F160L N171D",2
"lib1","SARS-CoV-2","AGAGTCACTCTGACTG",1,12.83,6,-4.76,1.09,1.5,1.11,0.02,">1 nonsynonymous","G51T I138D G146M",3
"lib1","SARS-CoV-2","AGAGTCAGCGACGGGG",3,9.67,10.77,0.01,0.09,2.94,1.03,0,">1 nonsynonymous","G9D A33V A81K",3
"lib1","SARS-CoV-2","AGAGTCATAATCATCT",5,27.47,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","V77L G117W L122T Q144Y",4
"lib1","SARS-CoV-2","AGAGTCCTACAACACA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","T15Y Q84C L122* T140I",4
"lib1","SARS-CoV-2","AGAGTCGAGGTAAGCA",4,12.61,10.33,-0.44,0.16,2.64,1.2,0.02,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","AGAGTCGATTATCACA",3,93.54,10.35,-0.42,0.05,2.68,1.03,0,">1 nonsynonymous","N24I S147L",2
"lib1","SARS-CoV-2","AGAGTCGCTTCTACCA",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D I88F N120L T170S S200I",5
"lib1","SARS-CoV-2","AGAGTCGGAGCGACTG",3,31.54,10.21,-0.56,0.06,2.81,1.05,0,">1 nonsynonymous","N120S K128S F134S",3
"lib1","SARS-CoV-2","AGAGTCGTATGGTTGC",2,8.08,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","L38S I104V P133S F167P L183G T201M",6
"lib1","SARS-CoV-2","AGAGTCTATTCACGAC",3,19.28,10.58,-0.19,0.11,2.75,1.18,0.02,">1 nonsynonymous","A14Q T63S",2
"lib1","SARS-CoV-2","AGAGTCTCTACGTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* P197T",2
"lib1","SARS-CoV-2","AGAGTCTGAAGAATAA",7,114.16,8.49,-2.27,0.11,2.29,1.09,0.01,">1 nonsynonymous","I2L Y121K E141S F156N",4
"lib1","SARS-CoV-2","AGAGTCTTCCTTAGAT",1,19.69,8.76,-2.01,0.34,2.29,1.24,0.05,">1 nonsynonymous","L38P K87R F156L",3
"lib1","SARS-CoV-2","AGAGTGAAACCGTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91G E141V",2
"lib1","SARS-CoV-2","AGAGTGAATATAAGGT",2,45.48,10.78,0.01,0.04,2.95,1,0,">1 nonsynonymous","N64T T201R",2
"lib1","SARS-CoV-2","AGAGTGAATCCGCGCA",1,98.52,10.05,-0.71,0.07,2.27,1.03,0,"1 nonsynonymous","N1P",1
"lib1","SARS-CoV-2","AGAGTGAATTTGTGGG",2,14.81,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C49I I80L D112K",3
"lib1","SARS-CoV-2","AGAGTGACCACGAAAA",3,80.87,9.44,-1.33,0.06,2.69,1.08,0,">1 nonsynonymous","T63S G116R G174F",3
"lib1","SARS-CoV-2","AGAGTGAGATATACGA",1,14.92,9.01,-1.75,0.28,1.5,1.18,0.05,">1 nonsynonymous","G9E N64F A89R",3
"lib1","SARS-CoV-2","AGAGTGATACATACAG",1,21.49,6.72,-4.05,0.31,1.5,1.11,0.02,">1 nonsynonymous","P54L N92L Y175L",3
"lib1","SARS-CoV-2","AGAGTGATAGGCTAAT",4,68.22,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y66S N107L N130A F134L K198D",5
"lib1","SARS-CoV-2","AGAGTGATCACATGGT",1,23.73,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","AGAGTGCAAAGGCACC",1,27.49,10.74,-0.02,0.06,2.96,1.01,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","AGAGTGCATGGGTTAT",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W A33L C49V L60I",4
"lib1","SARS-CoV-2","AGAGTGCCCCTCATCA",3,130.23,10.8,0.04,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTGCTCTACGACA",2,21.85,10.12,-0.64,0.25,1.91,1.06,0.03,">1 nonsynonymous","V20P N40C T46Y T55K G83L",5
"lib1","SARS-CoV-2","AGAGTGCTGTATTTCG",4,41.43,10.72,-0.04,0.05,2.95,1,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","AGAGTGGAACAACTGA",9,156.38,8.07,-2.69,0.21,1.78,1.1,0.02,">1 nonsynonymous","R27L D98W N157T",3
"lib1","SARS-CoV-2","AGAGTGGAGTAAACCC",5,40.97,7.07,-3.69,0.29,1.5,1.09,0.02,">1 nonsynonymous","V37L N64P Y165W V173W",4
"lib1","SARS-CoV-2","AGAGTGGCAGTCATTT",2,37.6,10.19,-0.58,0.08,2.9,1.01,0,">1 nonsynonymous","S41W Q84T E141I T201K",4
"lib1","SARS-CoV-2","AGAGTGGCCTGGGCAT",9,19.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y91V Y165P S184T",3
"lib1","SARS-CoV-2","AGAGTGGTGAGGATGT",2,18.28,8.53,-2.23,0.35,1.5,1.06,0.06,">1 nonsynonymous","V153G N171T L183T",3
"lib1","SARS-CoV-2","AGAGTGTTAGCGATGT",3,22.96,7.95,-2.82,0.15,1.68,1.14,0.01,">1 nonsynonymous","V37I D112A",2
"lib1","SARS-CoV-2","AGAGTTAAAAAAATAT",7,2.02,NA,NA,NA,NA,NA,NA,"stop","I88R K94*",2
"lib1","SARS-CoV-2","AGAGTTAAGCACTTGA",8,96.37,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K26Q G51S N64D Y119C R127Q T201A",6
"lib1","SARS-CoV-2","AGAGTTAATGCCTGGG",3,97.17,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P7T G51L D98L S129L A145S T201D",6
"lib1","SARS-CoV-2","AGAGTTACAACAACAT",3,0.41,NA,NA,NA,NA,NA,NA,"stop","N58C N171V Y175*",3
"lib1","SARS-CoV-2","AGAGTTACAATAAGAA",1,10.44,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","P96N A105Y S113K A190E",4
"lib1","SARS-CoV-2","AGAGTTACATCCAATG",4,46.57,8.83,-1.94,0.24,1.5,1.11,0.03,"1 nonsynonymous","I28P",1
"lib1","SARS-CoV-2","AGAGTTACCGTCAATA",6,7.06,NA,NA,NA,NA,NA,NA,"stop","T63* G155C L162P",3
"lib1","SARS-CoV-2","AGAGTTACGAAATAGC",6,78.97,10.61,-0.16,0.04,2.94,1.04,0,"1 nonsynonymous","S41H",1
"lib1","SARS-CoV-2","AGAGTTACGGCAAAAA",5,100.82,7.53,-3.23,0.2,1.5,1.1,0.01,">1 nonsynonymous","C61D G86A Q168E",3
"lib1","SARS-CoV-2","AGAGTTACTAAACACA",5,74.37,10.58,-0.19,0.1,2.71,1.05,0,">1 nonsynonymous","T63R E141R V153N",3
"lib1","SARS-CoV-2","AGAGTTAGTACCTCAG",3,37.4,10.19,-0.57,0.13,2.56,1,0.01,">1 nonsynonymous","I2L Y91R",2
"lib1","SARS-CoV-2","AGAGTTATACGGATCT",2,40.06,10.07,-0.69,0.07,2.72,1.01,0,">1 nonsynonymous","I88L A190T",2
"lib1","SARS-CoV-2","AGAGTTATATAATAAA",4,53.19,10.5,-0.26,0.06,2.9,1.06,0,">1 nonsynonymous","S41G N58S",2
"lib1","SARS-CoV-2","AGAGTTATCGGGCACG",2,56.85,10.53,-0.23,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGAGTTATGTAACACT",4,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L A14P F44C C49T P54S I104P",6
"lib1","SARS-CoV-2","AGAGTTCAAACTGCAG",6,85.01,9.78,-0.98,0.05,2.87,1.08,0,">1 nonsynonymous","Y119R Q163R",2
"lib1","SARS-CoV-2","AGAGTTCACAGCTCAG",4,59.98,9.21,-1.56,0.08,2.87,1.12,0,">1 nonsynonymous","Y119E P149K",2
"lib1","SARS-CoV-2","AGAGTTCACTCGACGG",10,149.06,10.64,-0.12,0.04,2.94,1.04,0,">1 nonsynonymous","Y35L D98F K198E",3
"lib1","SARS-CoV-2","AGAGTTCTGTAAGAAT",5,45.2,6.33,-4.43,0.44,1.5,1.18,0.02,">1 nonsynonymous","L57V I88Y Q144M G172K",4
"lib1","SARS-CoV-2","AGAGTTGACCTTAGAT",6,49.91,10.27,-0.5,0.06,2.93,1.01,0,">1 nonsynonymous","S36E Y143L",2
"lib1","SARS-CoV-2","AGAGTTGGCACCCATG",4,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y S69I G174W",3
"lib1","SARS-CoV-2","AGAGTTGTACTTTTAG",12,31.99,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","N1K T55Y I80L W106D",4
"lib1","SARS-CoV-2","AGAGTTGTCCAATCCC",7,1.37,NA,NA,NA,NA,NA,NA,"stop","T3R Y39* W106R N120T",4
"lib1","SARS-CoV-2","AGAGTTTAATCCACTA",5,0.95,NA,NA,NA,NA,NA,NA,"stop","F8* C61A P82Q G101C K114V",5
"lib1","SARS-CoV-2","AGAGTTTACACCAGCA",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I K94S K114E T148P",4
"lib1","SARS-CoV-2","AGAGTTTACACCCCTT",1,41.69,9.58,-1.19,0.08,2.4,1.06,0,">1 nonsynonymous","I2Y S41I N107K I138L",4
"lib1","SARS-CoV-2","AGAGTTTCATTAAACA",4,118.43,10.76,-0.01,0.05,2.98,1,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","AGAGTTTCCTAACTCC",2,10.79,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A33P L57Y Q84T Y119M F134S",5
"lib1","SARS-CoV-2","AGAGTTTCTTATAATT",3,165.21,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K48M K56M G86W T201N",4
"lib1","SARS-CoV-2","AGAGTTTGTAAGTACA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C Y21P",2
"lib1","SARS-CoV-2","AGAGTTTTAAAAAGAT",5,34.57,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","V37R F44L P96F S139T C158S",5
"lib1","SARS-CoV-2","AGAGTTTTAATCAAAT",1,15.82,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I28G L38Q Y50N",3
"lib1","SARS-CoV-2","AGAGTTTTACAATTCA",5,2.14,NA,NA,NA,NA,NA,NA,"stop","S36* K48G T100G K128V",4
"lib1","SARS-CoV-2","AGAGTTTTCAGAGTAA",3,20.9,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C49Y Y93L Y123V",3
"lib1","SARS-CoV-2","AGAGTTTTCTTCCATT",4,47.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37K F99T I104F V181F",4
"lib1","SARS-CoV-2","AGAGTTTTTCCCCCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63L S69T T100K T201L",4
"lib1","SARS-CoV-2","AGATAAAAAACAGGAG",11,126.67,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R136G Y165L",2
"lib1","SARS-CoV-2","AGATAAAAAACGCCTA",2,7.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19K Y35A",2
"lib1","SARS-CoV-2","AGATAAAAAATGAAAA",2,35.05,10.43,-0.33,0.07,2.94,1.03,0,">1 nonsynonymous","P7L T201R",2
"lib1","SARS-CoV-2","AGATAAAAACATCTAC",6,26.76,6.01,-4.76,1.44,1.5,1.24,0.04,">1 nonsynonymous","S53E P82C G86Y D112G Y119N",5
"lib1","SARS-CoV-2","AGATAAAAAGATTTGA",1,33.22,9.83,-0.93,0.23,1.6,1.18,0.02,">1 nonsynonymous","Q84K W106S K128R",3
"lib1","SARS-CoV-2","AGATAAAACAGCTCCA",1,5.95,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","V20K Y50S S139P C158S",4
"lib1","SARS-CoV-2","AGATAAAACTAAGCAG",10,161.92,10.77,0.01,0.05,2.91,1.06,0,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","AGATAAAACTAATATA",5,2.05,NA,NA,NA,NA,NA,NA,"stop","N1D G116* Y119L",3
"lib1","SARS-CoV-2","AGATAAAACTCAGAAA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","D97P I142*",2
"lib1","SARS-CoV-2","AGATAAAACTCAGTCC",5,102.11,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A42W A89R P96N N151V C158Q T201N",6
"lib1","SARS-CoV-2","AGATAAAAGTGCAGAG",6,147.36,8.52,-2.25,0.1,2.7,1.04,0,">1 nonsynonymous","N1P K87L K132E G152N N157T",5
"lib1","SARS-CoV-2","AGATAAAAGTGTACGG",3,112.45,10.77,0.01,0.06,2.87,1.1,0,">1 nonsynonymous","I2N P7K Y35F",3
"lib1","SARS-CoV-2","AGATAAAAGTGTCGCG",9,2.57,NA,NA,NA,NA,NA,NA,"stop","L38V N64* S108A",3
"lib1","SARS-CoV-2","AGATAAAATAATGAAT",8,96.41,10.25,-0.52,0.06,2.91,1.03,0,">1 nonsynonymous","L125G R136K",2
"lib1","SARS-CoV-2","AGATAAACAAGAGTGA",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V L38R K94G Y119G Q176T",5
"lib1","SARS-CoV-2","AGATAAACAATAAGAC",4,63.33,9.92,-0.84,0.12,1.91,1.08,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","AGATAAACCCCTTAAT",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R L95P G155Q",3
"lib1","SARS-CoV-2","AGATAAACGCTGCAAG",8,28.95,9.51,-1.26,0.11,2.51,1.07,0.01,">1 nonsynonymous","T85R Y121I N151I P191K K198R",5
"lib1","SARS-CoV-2","AGATAAACTTTCAGTA",4,1.22,NA,NA,NA,NA,NA,NA,"stop","D90F D98V C150*",3
"lib1","SARS-CoV-2","AGATAAAGTTTTAGTA",14,21.8,NA,NA,NA,NA,NA,NA,"stop","Y21G N58*",2
"lib1","SARS-CoV-2","AGATAAATAAACAATG",3,2.28,NA,NA,NA,NA,NA,NA,"stop","I2M K48G T85A D98F K128* F134S T201*",7
"lib1","SARS-CoV-2","AGATAAATAATGAAAT",9,154.67,10.63,-0.14,0.03,2.89,1,0,">1 nonsynonymous","T100C Y143F L162V",3
"lib1","SARS-CoV-2","AGATAAATACCATAGC",1,62.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L T100D N118T T148W",4
"lib1","SARS-CoV-2","AGATAAATCAACGCTG",2,9.25,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T55G R124I G146P T201W",4
"lib1","SARS-CoV-2","AGATAAATTAACGGTG",6,87.82,9.45,-1.32,0.12,2.22,1.11,0.01,">1 nonsynonymous","I104S P149N F156R",3
"lib1","SARS-CoV-2","AGATAACAAAACGGGT",4,21.97,9.77,-0.99,0.29,1.62,1.08,0.04,">1 nonsynonymous","T3F V181A",2
"lib1","SARS-CoV-2","AGATAACAACACACGT",5,25.23,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","A81Y K94V P133T I142R Q168H",5
"lib1","SARS-CoV-2","AGATAACAACTACCCC",1,22.26,9.99,-0.77,0.04,2.95,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","AGATAACAACTCGATG",1,21.6,10.1,-0.67,0.08,2.78,1.02,0,">1 nonsynonymous","K87T W106Q",2
"lib1","SARS-CoV-2","AGATAACAAGAGAACC",3,27.03,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D68R G101C Q168V",3
"lib1","SARS-CoV-2","AGATAACAATATTGCT",8,96.59,6.31,-4.46,0.7,1.5,1.18,0.02,">1 nonsynonymous","E10G T15Q C61T E76K N107Y",5
"lib1","SARS-CoV-2","AGATAACAATCAAAGG",5,11.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14T D34V R179G",3
"lib1","SARS-CoV-2","AGATAACAATGCCGTC",2,101.07,10.14,-0.63,0.06,2.75,1.01,0,">1 nonsynonymous","N30T S36W",2
"lib1","SARS-CoV-2","AGATAACACCTTGAAC",1,21.97,6.5,-4.26,0.76,1.5,1.12,0.06,">1 nonsynonymous","K56D G101H",2
"lib1","SARS-CoV-2","AGATAACACTCGAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149L Y178H",2
"lib1","SARS-CoV-2","AGATAACATGCAGAAA",1,12.18,9.29,-1.48,0.25,1.89,1.02,0.05,">1 nonsynonymous","R16F C61L V103I N110I I138A",5
"lib1","SARS-CoV-2","AGATAACATGTATACA",7,31.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F70G N151I",2
"lib1","SARS-CoV-2","AGATAACATTAACGGT",7,42.71,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G83C A89C Y121D",3
"lib1","SARS-CoV-2","AGATAACCAGGACCAT",7,19.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D98Y V103N N109Y",3
"lib1","SARS-CoV-2","AGATAACGTCACAATA",2,55.65,10.53,-0.24,0.06,2.88,1.09,0,">1 nonsynonymous","R27K A42H",2
"lib1","SARS-CoV-2","AGATAACTAACCAACT",3,57.37,10.81,0.05,0.05,2.92,1.04,0,"1 nonsynonymous","S43Y",1
"lib1","SARS-CoV-2","AGATAACTACAGCGGC",8,148.61,10.01,-0.76,0.08,2.88,1.02,0,">1 nonsynonymous","I2K K87I A105T P169T C195F T201L",6
"lib1","SARS-CoV-2","AGATAACTCAAAGTAT",14,5.38,NA,NA,NA,NA,NA,NA,"stop","N4T Q84N N107P G117S Y121* P169R",6
"lib1","SARS-CoV-2","AGATAACTTGCATCAA",4,25.63,10.32,-0.45,0.1,2.74,1.1,0,">1 nonsynonymous","D97S R136H",2
"lib1","SARS-CoV-2","AGATAAGACCCATCTA",1,54.2,8.73,-2.04,0.16,2.11,1.15,0.01,">1 nonsynonymous","Y91W K128I F160T",3
"lib1","SARS-CoV-2","AGATAAGATGCAATAG",5,81.2,10.6,-0.17,0.05,2.9,1.03,0,">1 nonsynonymous","I2A C61N P96A",3
"lib1","SARS-CoV-2","AGATAAGCAGCTTCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","C61T G74W F99C A105P Y119* S139E G146L",7
"lib1","SARS-CoV-2","AGATAAGCTGATGGGC",7,198.59,8.04,-2.73,0.15,1.67,1.16,0.01,">1 nonsynonymous","C6D N58L K87V Y165H",4
"lib1","SARS-CoV-2","AGATAAGGTCAAAAGG",2,30.64,10.76,-0.01,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATAAGTAAAGAAAT",2,29.96,10.34,-0.42,0.07,2.88,1,0,">1 nonsynonymous","N64D Y91L",2
"lib1","SARS-CoV-2","AGATAAGTAACACGAC",4,19.35,9.86,-0.9,0.25,2.01,1.04,0.02,"1 nonsynonymous","D34M",1
"lib1","SARS-CoV-2","AGATAAGTAAGATATA",4,56.61,9.47,-1.3,0.13,2,1.13,0.01,">1 nonsynonymous","F62W R127L",2
"lib1","SARS-CoV-2","AGATAAGTAATGTCTA",6,44.71,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y21W S29R T46I V71S I80F N157F",6
"lib1","SARS-CoV-2","AGATAAGTTGTCATGT",3,36.92,10.04,-0.72,0.07,2.61,1.04,0,">1 nonsynonymous","A89C Y123S",2
"lib1","SARS-CoV-2","AGATAATAATAAAAGG",4,51.37,8.88,-1.88,0.09,2.28,1.11,0,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","AGATAATATATTCCCA",4,6.97,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y93I E135R",2
"lib1","SARS-CoV-2","AGATAATCACTGCTTT",5,8.06,10.65,-0.11,0.12,1.98,1,0.01,">1 nonsynonymous","A22S C61P V115L P149H F185T",5
"lib1","SARS-CoV-2","AGATAATCAGGAAACG",6,132.3,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N4M G146Y G166Y P177H T201M",5
"lib1","SARS-CoV-2","AGATAATCCATGACTT",4,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R P82V",2
"lib1","SARS-CoV-2","AGATAATCTCAAGATT",2,23.93,8.57,-2.2,0.14,1.9,1.04,0.01,">1 nonsynonymous","D90Q R127L",2
"lib1","SARS-CoV-2","AGATAATCTCTGAAAG",2,15.47,6,-4.76,2,1.5,1.19,0.03,"1 nonsynonymous","F70V",1
"lib1","SARS-CoV-2","AGATAATGCCGTTAAA",5,77.6,10.67,-0.09,0.06,2.88,1.01,0,">1 nonsynonymous","V65T Q84A T100L S200C",4
"lib1","SARS-CoV-2","AGATAATGGAACAGTA",4,55.16,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S36K N58T P82S",3
"lib1","SARS-CoV-2","AGATAATGTAAATACT",1,13.19,10.67,-0.09,0.13,2.87,1,0.01,">1 nonsynonymous","T3V G83H N130V T201R",4
"lib1","SARS-CoV-2","AGATAATGTTGACTTC",4,79.43,8.49,-2.28,0.17,1.55,1.21,0.01,">1 nonsynonymous","G116T K128I Q144W",3
"lib1","SARS-CoV-2","AGATAATTAACTAAAT",9,109.67,10.69,-0.08,0.04,2.96,1.02,0,"1 nonsynonymous","V115F",1
"lib1","SARS-CoV-2","AGATACAAAACGTAAA",2,20.62,9.7,-1.06,0.09,2.8,1,0,">1 nonsynonymous","I142S V153F",2
"lib1","SARS-CoV-2","AGATACAACCCACGAT",2,15.84,10.49,-0.27,0.09,2.97,1,0,">1 nonsynonymous","A33Y Y66V T85S F134R",4
"lib1","SARS-CoV-2","AGATACAACCCGAAAC",2,44.58,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","C6F G51C S113R",3
"lib1","SARS-CoV-2","AGATACAACCGATTTA",1,23.14,10.54,-0.22,0.06,2.95,1.02,0,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","AGATACAAGAGGCCGA",1,13.96,10.16,-0.61,0.41,1.5,1,0.06,">1 nonsynonymous","V77A T148P T201K",3
"lib1","SARS-CoV-2","AGATACAAGCAAATCA",1,34.92,9.94,-0.82,0.05,2.89,1.03,0,">1 nonsynonymous","N120T K199V",2
"lib1","SARS-CoV-2","AGATACAAGCACGTAT",2,12.28,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","S36M F99V L131R P149S",4
"lib1","SARS-CoV-2","AGATACAATACTGTCG",5,68.65,10.18,-0.59,0.08,2.8,1,0,">1 nonsynonymous","C6D K132V",2
"lib1","SARS-CoV-2","AGATACAATCGACACC",2,56.36,10.36,-0.41,0.06,2.81,1.1,0,">1 nonsynonymous","L5R L60R K132M T148H",4
"lib1","SARS-CoV-2","AGATACACAAATACAT",1,22.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100V D112P",2
"lib1","SARS-CoV-2","AGATACACACGATGGA",1,20.07,9.21,-1.56,0.17,2.42,1.25,0.01,">1 nonsynonymous","N1Y S29C P169F",3
"lib1","SARS-CoV-2","AGATACACAGTAGATA",2,14.94,10.24,-0.52,0.14,2.81,1.09,0,">1 nonsynonymous","Y121N I138V",2
"lib1","SARS-CoV-2","AGATACACTATAGGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14L Y119R S129*",3
"lib1","SARS-CoV-2","AGATACACTGTAAAAC",3,9.61,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","S53T F70H",2
"lib1","SARS-CoV-2","AGATACACTTCCGAAA",1,59.98,10.86,0.1,0.1,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATACACTTGATAAG",8,64.2,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","Y35D A81L Y121C",3
"lib1","SARS-CoV-2","AGATACAGAATCCATT",4,132.51,7.3,-3.46,0.31,1.5,1.15,0.02,">1 nonsynonymous","Y35S G51F K87S T201N",4
"lib1","SARS-CoV-2","AGATACAGACCCACGC",9,157.19,9.14,-1.62,0.05,2.87,1.09,0,">1 nonsynonymous","T63G Q168L",2
"lib1","SARS-CoV-2","AGATACATAGTAAGAA",9,7.75,NA,NA,NA,NA,NA,NA,"stop","Y21* A33D L60F R73S C150I",5
"lib1","SARS-CoV-2","AGATACATTAATGTAA",7,1.8,NA,NA,NA,NA,NA,NA,"stop","L5* S69N Y165S V173A",4
"lib1","SARS-CoV-2","AGATACCAAACACAAA",1,5.77,10.11,-0.65,0.13,2.15,1,0,">1 nonsynonymous","D98G N107A",2
"lib1","SARS-CoV-2","AGATACCAGGGAATAC",1,5.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y P96D N118S K132Y",4
"lib1","SARS-CoV-2","AGATACCCATTTATGC",5,48.25,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10F S36W V103P",3
"lib1","SARS-CoV-2","AGATACCGAAGCACTT",2,47.23,10.44,-0.32,0.07,2.88,1,0,">1 nonsynonymous","A42I P96A",2
"lib1","SARS-CoV-2","AGATACCTAGTTTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49* N92K D97W Y121L E186H",5
"lib1","SARS-CoV-2","AGATACCTATAGATAA",4,77.33,6.34,-4.43,0.41,1.5,1.11,0.01,">1 nonsynonymous","N1D C6W P169H N171K",4
"lib1","SARS-CoV-2","AGATACCTGTACAACC",6,107.4,6.22,-4.54,0.73,1.5,1.27,0.03,">1 nonsynonymous","G9V P96L",2
"lib1","SARS-CoV-2","AGATACGAACCTTTGA",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","AGATACGACATTTACA",8,54.19,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","K94V R124I T201Y",3
"lib1","SARS-CoV-2","AGATACGACTACAACC",3,96.25,10.19,-0.58,0.06,2.74,1,0,"1 nonsynonymous","D34A",1
"lib1","SARS-CoV-2","AGATACGCATTTGTAT",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128L F156C",2
"lib1","SARS-CoV-2","AGATACGGTCACACGG",17,107.34,6,-4.76,1.81,1.5,1.2,0.01,">1 nonsynonymous","E76P A89Y",2
"lib1","SARS-CoV-2","AGATACGTAAAACATA",4,67.86,10.59,-0.18,0.06,2.86,1.03,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","AGATACGTAACACATT",3,34.35,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","N13K D90H P96R",3
"lib1","SARS-CoV-2","AGATACTAACGACAAC",2,16.04,10.44,-0.33,0.1,2.83,1.01,0,"1 nonsynonymous","L38V",1
"lib1","SARS-CoV-2","AGATACTAATCAACCT",1,17.26,8.88,-1.88,0.35,1.5,1.31,0.05,"1 nonsynonymous","V71S",1
"lib1","SARS-CoV-2","AGATACTAATCCAAAA",4,11.73,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y121P L162P",2
"lib1","SARS-CoV-2","AGATACTCCCCTGTAA",5,39.21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","W23G I104C",2
"lib1","SARS-CoV-2","AGATACTCCTTCACTG",5,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F I104T G152N V180D",4
"lib1","SARS-CoV-2","AGATACTCTTACCCAT",5,45.55,10.75,-0.01,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATACTGAGTCATGC",1,14.61,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","R27M C61W R136H F185D",4
"lib1","SARS-CoV-2","AGATACTGATGTGCTG",2,13.67,7.3,-3.46,0.4,1.71,1.14,0.04,">1 nonsynonymous","I2K G83I K87E T100N N130L",5
"lib1","SARS-CoV-2","AGATACTTCGATGCAT",1,6.93,9.32,-1.44,0.28,1.79,1.22,0.05,">1 nonsynonymous","S139G Y165W",2
"lib1","SARS-CoV-2","AGATACTTGACACTAA",1,15.78,10.69,-0.08,0.06,2.97,1,0,">1 nonsynonymous","E10K K56D",2
"lib1","SARS-CoV-2","AGATACTTGCTTGTTG",3,127.3,10.07,-0.69,0.06,2.67,1.01,0,">1 nonsynonymous","S41Y A105F",2
"lib1","SARS-CoV-2","AGATAGAAATAACTAC",1,6.04,10.52,-0.25,0.31,2.58,1.07,0.04,">1 nonsynonymous","Y35G N64G",2
"lib1","SARS-CoV-2","AGATAGAAATATATCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V I72W",2
"lib1","SARS-CoV-2","AGATAGAACCACTGAG",1,11.06,6.07,-4.69,2,1.5,1.13,0.07,">1 nonsynonymous","L5H D90V Y165L",3
"lib1","SARS-CoV-2","AGATAGACATTTCAAT",2,69.99,6.08,-4.69,0.92,1.5,1.17,0.01,">1 nonsynonymous","R25K F47L C61V",3
"lib1","SARS-CoV-2","AGATAGAGAACAAGCG",2,0.18,NA,NA,NA,NA,NA,NA,"stop","T3H S129* Y178T K199*",4
"lib1","SARS-CoV-2","AGATAGAGGTAAATAG",1,38.77,7.33,-3.44,0.28,1.5,1.01,0.02,">1 nonsynonymous","S29L S113R K128N",3
"lib1","SARS-CoV-2","AGATAGAGTTGTTTTT",6,58.07,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A33K G51F V77S F134T P161N",5
"lib1","SARS-CoV-2","AGATAGATATTATTGT",2,0.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","AGATAGATGTATATGA",1,30.31,10.43,-0.34,0.08,2.94,1,0,">1 nonsynonymous","S129N G174P",2
"lib1","SARS-CoV-2","AGATAGATTAAGAAAC",1,4.22,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGATAGATTGTGTTTC",4,24.23,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","F44L D98R N107K E154Q Q168L",5
"lib1","SARS-CoV-2","AGATAGCAAACAGATA",5,12.95,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G74S K87R W106L C150G",4
"lib1","SARS-CoV-2","AGATAGCAAAGAGTCT",8,183.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y159L Q176R",2
"lib1","SARS-CoV-2","AGATAGCAAGCGAATA",5,119.16,10.67,-0.09,0.03,2.93,1.02,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","AGATAGCAATTTATTC",4,14.57,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","I88L C102R T140M L183I",4
"lib1","SARS-CoV-2","AGATAGCATGATATAA",6,32.3,6.15,-4.62,0.7,1.5,1.18,0.02,">1 nonsynonymous","G9T R78F G83C K87Y S139I",5
"lib1","SARS-CoV-2","AGATAGCCGTCAAGAT",3,71.81,9.84,-0.92,0.16,1.76,1.06,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","AGATAGCCTTATTTTA",3,169.18,10.5,-0.26,0.05,2.84,1.03,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","AGATAGCCTTTATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* C49* L95P S129* G152R T201W",6
"lib1","SARS-CoV-2","AGATAGCGGACCTCAC",2,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W T15N A42L C49T I142V S164D",6
"lib1","SARS-CoV-2","AGATAGCTGTGGCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N C61Q T100R G101D",4
"lib1","SARS-CoV-2","AGATAGGAGTCCCGCA",3,7.57,7.03,-3.73,0.5,1.5,1,0.07,">1 nonsynonymous","C49P E76C W106I P149R",4
"lib1","SARS-CoV-2","AGATAGGCCTCTCCCA",2,6.66,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","I80S L95Y N130L I142V",4
"lib1","SARS-CoV-2","AGATAGGTAATCATAA",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y S45P G116C",3
"lib1","SARS-CoV-2","AGATAGGTATAAGTTA",2,77.15,10.7,-0.06,0.04,2.96,1.03,0,">1 nonsynonymous","I2H A192T",2
"lib1","SARS-CoV-2","AGATAGTACATTGGCA",12,92.18,6.4,-4.37,0.49,1.5,1.18,0.02,">1 nonsynonymous","C61G A81C R136H",3
"lib1","SARS-CoV-2","AGATAGTATCACCGCG",9,182.04,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3P K128I T140F F167S",4
"lib1","SARS-CoV-2","AGATAGTATGAAAAAT",6,135.45,10.82,0.06,0.04,2.9,1.06,0,"1 nonsynonymous","G9H",1
"lib1","SARS-CoV-2","AGATAGTCCTGCATCA",1,68.23,10.16,-0.6,0.06,2.83,1,0,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","AGATAGTCTCGACGTA",3,62.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y21S G86V",2
"lib1","SARS-CoV-2","AGATAGTGAAAGTCAC",9,318.07,6,-4.76,1.37,1.5,1.15,0.01,">1 nonsynonymous","T55I K128Q C158E T201Q",4
"lib1","SARS-CoV-2","AGATAGTGATTATTAA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","N4* V103D N107Q F167V",4
"lib1","SARS-CoV-2","AGATAGTGCAGGAGAC",5,53.84,10.78,0.01,0.07,2.83,1.1,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","AGATAGTTCTCAACTG",1,32.95,8.53,-2.24,0.19,2.19,1.12,0.01,">1 nonsynonymous","I28G F156I P169S",3
"lib1","SARS-CoV-2","AGATATAAAAATATAA",3,24.14,10.59,-0.17,0.08,2.86,1.08,0,">1 nonsynonymous","D98S L122V",2
"lib1","SARS-CoV-2","AGATATAAACCAACAT",10,180.71,10.81,0.04,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATAAACCACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T63* K199M",2
"lib1","SARS-CoV-2","AGATATAACGCTACGT",12,102.71,10.52,-0.24,0.05,2.84,1.07,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","AGATATAAGATTCGGC",4,0.29,NA,NA,NA,NA,NA,NA,"stop","R16* G51Y T63E K114E T140F G146F Y178I",7
"lib1","SARS-CoV-2","AGATATAAGTTATTTA",8,3.69,NA,NA,NA,NA,NA,NA,"stop","N1A K56* D137N",3
"lib1","SARS-CoV-2","AGATATACAAGTAGTT",4,58.87,10.44,-0.32,0.06,2.94,1.02,0,">1 nonsynonymous","N40G D90E A190T",3
"lib1","SARS-CoV-2","AGATATACAAGTTCCC",2,75.39,10.8,0.04,0.07,2.93,1.06,0,"1 nonsynonymous","N24K",1
"lib1","SARS-CoV-2","AGATATACCAAAGATT",3,31.52,10.73,-0.03,0.1,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATACGAATACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17* R27* Y93F",3
"lib1","SARS-CoV-2","AGATATACGACCCTAT",4,58.5,10.18,-0.59,0.04,2.87,1.07,0,">1 nonsynonymous","N4K A145C",2
"lib1","SARS-CoV-2","AGATATACTCCTCACG",6,73.36,10.76,0,0.07,2.94,1.02,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","AGATATAGAACAACAT",7,2.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160R",1
"lib1","SARS-CoV-2","AGATATAGACTTTACT",3,1.63,NA,NA,NA,NA,NA,NA,"stop","L38* G152I G166F",3
"lib1","SARS-CoV-2","AGATATATAAACGTTT",4,91.06,10.07,-0.7,0.06,2.74,1.04,0,">1 nonsynonymous","E154W Q163G",2
"lib1","SARS-CoV-2","AGATATATAGATACAC",18,172.92,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5K V37T C61R V103E T140I A192S",6
"lib1","SARS-CoV-2","AGATATATAGTTATAC",12,83.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50E D97N G152Q",3
"lib1","SARS-CoV-2","AGATATATGCTCATTT",4,39.78,9.26,-1.51,0.13,2.73,1.18,0.01,">1 nonsynonymous","A33T T63S G117T",3
"lib1","SARS-CoV-2","AGATATATGTCAGCTA",3,18.81,8.34,-2.43,0.32,1.5,1.08,0.03,">1 nonsynonymous","L122Q D137G",2
"lib1","SARS-CoV-2","AGATATATTAGTTGTT",2,14.65,10.81,0.04,0.07,2.96,1.01,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","AGATATATTATACCAA",3,34.08,6.98,-3.79,0.23,1.5,1.11,0.01,"1 nonsynonymous","R179A",1
"lib1","SARS-CoV-2","AGATATCACTTAGAAA",12,86.6,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","G9A V65G D112A",3
"lib1","SARS-CoV-2","AGATATCATAAGCCGA",4,38.97,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F8T R25D N58L P149T G166I F185S",6
"lib1","SARS-CoV-2","AGATATCATTAAGCCT",5,3.67,NA,NA,NA,NA,NA,NA,"stop","K128* Q144* P169E Q176T",4
"lib1","SARS-CoV-2","AGATATCCAGTTATGT",2,50.88,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6Y G86A G116C P177Y",4
"lib1","SARS-CoV-2","AGATATCGATTTTAGC",2,11.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14G V32R N107D N130P L162K",5
"lib1","SARS-CoV-2","AGATATCGGGATAGAA",19,409.99,10.8,0.04,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATCTATGAAAGT",7,0.34,NA,NA,NA,NA,NA,NA,"stop","D68N Y93* D112L",3
"lib1","SARS-CoV-2","AGATATCTGGTGCAAT",7,78.41,10.83,0.07,0.07,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATCTTAAGCTGC",8,2.87,NA,NA,NA,NA,NA,NA,"stop","I2F D90*",2
"lib1","SARS-CoV-2","AGATATGAAAAAAAAA",3,32.72,6.03,-4.73,0.97,1.5,1.17,0.03,">1 nonsynonymous","D112L V173S",2
"lib1","SARS-CoV-2","AGATATGAATATATGA",12,232.23,10.79,0.03,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATGATAAACACC",4,41.58,10.75,-0.01,0.06,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATATGCGCGAGCTA",3,65.37,8.81,-1.96,0.06,2.66,1.09,0,">1 nonsynonymous","N109V Y119W E141L",3
"lib1","SARS-CoV-2","AGATATGCGCTGAAGA",1,4.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGATATGCTTCGGACT",8,189.37,10.61,-0.15,0.05,2.86,1.04,0,">1 nonsynonymous","S19M A33F L122Q K199L",4
"lib1","SARS-CoV-2","AGATATGGACAGGCAA",6,1.48,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGATATGTCCCTCACA",5,133.01,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S113E Y178T",2
"lib1","SARS-CoV-2","AGATATGTGTGACGGT",2,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R N107H R124Y",3
"lib1","SARS-CoV-2","AGATATTAATGCTTAC",2,75.31,9.71,-1.05,0.07,2.45,1.06,0,">1 nonsynonymous","V37W N107V",2
"lib1","SARS-CoV-2","AGATATTACTGACGGA",7,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W D98T V115I Y143C G166T",5
"lib1","SARS-CoV-2","AGATATTATATCTCGA",2,31.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P96Q F99N L122C",3
"lib1","SARS-CoV-2","AGATATTATTGACGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50S F70K L122*",3
"lib1","SARS-CoV-2","AGATATTCAATATGGC",6,8.78,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G101V P161Y P169L",3
"lib1","SARS-CoV-2","AGATATTCCGGCTACC",6,22.16,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","D75S I104T R127L A145F",4
"lib1","SARS-CoV-2","AGATATTCGTAGACAT",1,12.28,10.35,-0.42,0.15,2.92,1.08,0.01,">1 nonsynonymous","I2A A42G K56V N64P",4
"lib1","SARS-CoV-2","AGATATTCGTGATATA",5,36.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R L122I",2
"lib1","SARS-CoV-2","AGATATTCTAAAATTG",1,12.79,6.35,-4.42,0.27,1.68,1.07,0,">1 nonsynonymous","Q84I R124Y",2
"lib1","SARS-CoV-2","AGATATTTAACAGCGG",6,1.33,NA,NA,NA,NA,NA,NA,"stop","K56N R78C Y91* P96H Q176D",5
"lib1","SARS-CoV-2","AGATATTTAACGCGTA",6,30.26,10.32,-0.44,0.21,1.86,1,0.01,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","AGATATTTTAATTATG",5,0.1,NA,NA,NA,NA,NA,NA,"stop","G101T N171*",2
"lib1","SARS-CoV-2","AGATCAAAACGGGAAA",16,120.2,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F47S I80G N157A T201N",4
"lib1","SARS-CoV-2","AGATCAAAAGACATCA",3,7.36,NA,NA,NA,NA,NA,NA,"stop","I72* F156R",2
"lib1","SARS-CoV-2","AGATCAAAAGAGCAAT",2,69.84,10.33,-0.44,0.05,2.88,1.06,0,">1 nonsynonymous","T100R E141S V180I",3
"lib1","SARS-CoV-2","AGATCAAAATAATGGT",5,82.17,6,-4.76,1.25,1.5,1.24,0.02,">1 nonsynonymous","N4L V11G Y91N",3
"lib1","SARS-CoV-2","AGATCAAAATATAAAC",8,93.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59L A89S L125S R136V N171L T201Q",6
"lib1","SARS-CoV-2","AGATCAAACGCAAACG",3,85.25,10.68,-0.08,0.04,2.98,1.01,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","AGATCAAAGAATAATC",7,89.26,10.48,-0.28,0.05,2.91,1.04,0,">1 nonsynonymous","T3F A145S",2
"lib1","SARS-CoV-2","AGATCAAAGACAAATT",5,59.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F44P N58V V182S",3
"lib1","SARS-CoV-2","AGATCAAATCACCGTA",1,59.69,10.72,-0.05,0.07,2.94,1.03,0,">1 nonsynonymous","L5T L60Q T100I N120D L125M",5
"lib1","SARS-CoV-2","AGATCAAATTGCCCGA",7,1703.74,9.8,-0.97,0.07,2.23,1.04,0,">1 nonsynonymous","K56C V173S",2
"lib1","SARS-CoV-2","AGATCAACACGAAACC",8,40.98,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9K Y50L G166L",3
"lib1","SARS-CoV-2","AGATCAACATGCTCCA",8,59.07,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A14L L60Q L125R Y178G",4
"lib1","SARS-CoV-2","AGATCAACCGGATTAA",4,1.68,NA,NA,NA,NA,NA,NA,"stop","N4* R27P N92L T201A",4
"lib1","SARS-CoV-2","AGATCAAGGTAATTTA",4,44.59,6.35,-4.42,0.59,1.5,1.2,0.03,">1 nonsynonymous","N107C S139K Y159L",3
"lib1","SARS-CoV-2","AGATCAAGGTATATGC",1,10.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35T T100P R127V",3
"lib1","SARS-CoV-2","AGATCAAGGTCGTATG",6,117.33,8.91,-1.86,0.21,1.5,1.17,0.02,">1 nonsynonymous","V103L K198V",2
"lib1","SARS-CoV-2","AGATCAATAACTCGAA",6,44.77,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G51R I88H D137N",3
"lib1","SARS-CoV-2","AGATCAATATCCAGAA",4,48.74,10.63,-0.14,0.04,2.94,1,0,">1 nonsynonymous","T85N N120Y",2
"lib1","SARS-CoV-2","AGATCAATTAACTACG",1,0.98,NA,NA,NA,NA,NA,NA,"stop","G9* K48N T85V Y123* G146V",5
"lib1","SARS-CoV-2","AGATCACAAACTCGAG",2,49.52,10.16,-0.6,0.06,2.87,1,0,">1 nonsynonymous","E10A K26M T85R H189V",4
"lib1","SARS-CoV-2","AGATCACAAGTATAAG",3,13.86,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2F W106T P133Y A190I",4
"lib1","SARS-CoV-2","AGATCACATAGTATAT",12,644.77,9.95,-0.82,0.07,2.25,1.01,0,"1 nonsynonymous","V65K",1
"lib1","SARS-CoV-2","AGATCACATTCACGCG",1,25.12,8.79,-1.97,0.23,1.66,1.12,0.02,">1 nonsynonymous","R27G N64R N118M E154I",4
"lib1","SARS-CoV-2","AGATCACCCTTTCTAC",2,44.54,9.42,-1.34,0.07,2.83,1.05,0,">1 nonsynonymous","S41L L125N",2
"lib1","SARS-CoV-2","AGATCACCTCTAATGA",4,77.95,9.36,-1.41,0.08,2.45,1.05,0,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","AGATCACTAGGTTCTA",11,152.71,10.8,0.04,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATCAGAATACATGG",2,51.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8R N24R L57I L162H",4
"lib1","SARS-CoV-2","AGATCAGATAAAAAAG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","AGATCAGATAAGTCAT",4,40.96,8.9,-1.86,0.14,1.76,1.14,0.01,"1 nonsynonymous","V71S",1
"lib1","SARS-CoV-2","AGATCAGCAACAAAAA",1,58.49,8.75,-2.01,0.1,2.78,1.15,0,">1 nonsynonymous","P7T Y66I Q84T Y119L S200H",5
"lib1","SARS-CoV-2","AGATCAGCTAAGTCCA",5,9.06,6,-4.76,2,3,1.06,0,">1 nonsynonymous","C49Q Y66F Y121R",3
"lib1","SARS-CoV-2","AGATCAGTTTAGACAG",2,61.95,10.82,0.05,0.07,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATCATAACGGAACT",2,17.35,8.9,-1.86,0.3,1.5,1.26,0.04,">1 nonsynonymous","F44S V103T",2
"lib1","SARS-CoV-2","AGATCATATACAGCGA",2,26.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38R N107G R127V R179C",4
"lib1","SARS-CoV-2","AGATCATATGGGTGAT",4,45.16,10.72,-0.05,0.04,2.96,1.02,0,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","AGATCATATTGAATAC",3,7.59,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D90G I104L S113R Q168A",4
"lib1","SARS-CoV-2","AGATCATCAGTTATCT",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N I28W F99V N107S I142K",5
"lib1","SARS-CoV-2","AGATCATGATGCATCT",4,30.7,6,-4.76,1.17,1.5,1.17,0.01,">1 nonsynonymous","T46D K56W Q79R",3
"lib1","SARS-CoV-2","AGATCATGCACTCTCT",4,37.7,6.8,-3.96,0.28,1.5,1.07,0.01,">1 nonsynonymous","F62C D137S P149G",3
"lib1","SARS-CoV-2","AGATCATGTCTTCTGA",3,41.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A18V S41Q F62Y G146K N151L",5
"lib1","SARS-CoV-2","AGATCCAAGCCATATA",10,139.55,9.99,-0.78,0.06,2.28,1.06,0,"1 nonsynonymous","S19K",1
"lib1","SARS-CoV-2","AGATCCACAATATCGC",3,62.3,10.01,-0.75,0.06,2.67,1.04,0,">1 nonsynonymous","V37N R136Y",2
"lib1","SARS-CoV-2","AGATCCACAATCCTGG",1,13,10.76,-0.01,0.08,2.98,1.02,0.01,"1 nonsynonymous","R16Y",1
"lib1","SARS-CoV-2","AGATCCACACACACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* F12M G166S",3
"lib1","SARS-CoV-2","AGATCCACGGACAAAG",1,21.69,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","L38V V180P",2
"lib1","SARS-CoV-2","AGATCCACTTTAAATG",4,40.26,10.8,0.03,0.07,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATCCAGGGATTAAT",6,20.1,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","S69L G83I D97S",3
"lib1","SARS-CoV-2","AGATCCAGGTAAGGTT",13,99.91,10.66,-0.11,0.06,2.86,1.1,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","AGATCCATAATCCAGG",4,81.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V32S S113V Y159L",3
"lib1","SARS-CoV-2","AGATCCATAATTCGTA",1,15.79,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N40L D68R F99M",3
"lib1","SARS-CoV-2","AGATCCATACGCAAAA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","D34S Y123A S184* L188M",4
"lib1","SARS-CoV-2","AGATCCATTGACAACA",1,22.77,10.1,-0.67,0.1,2.76,1.1,0,">1 nonsynonymous","S129T Q144F",2
"lib1","SARS-CoV-2","AGATCCCAAGGTACAT",1,38.19,10.46,-0.3,0.07,2.91,1.03,0,"1 nonsynonymous","F12L",1
"lib1","SARS-CoV-2","AGATCCCAATAATACG",17,188.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37N S45A G86W N118S N171S",5
"lib1","SARS-CoV-2","AGATCCCAATCAACTG",10,49.85,9.9,-0.86,0.11,2.08,1.01,0,">1 nonsynonymous","I2S D97V N120M R136S",4
"lib1","SARS-CoV-2","AGATCCCAGCTTTTTG",6,63,10.67,-0.09,0.07,2.9,1.03,0,"1 nonsynonymous","V173E",1
"lib1","SARS-CoV-2","AGATCCCATTATTCGG",3,48.32,7.63,-3.14,0.19,1.63,1.15,0.01,">1 nonsynonymous","K128A C158S",2
"lib1","SARS-CoV-2","AGATCCCGGCTACTAA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I F44P F99L G146K G174R L183T",6
"lib1","SARS-CoV-2","AGATCCCTATCTCGAC",6,175.8,10.76,-0.01,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATCCCTCCGTATTA",1,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48C",1
"lib1","SARS-CoV-2","AGATCCCTGCCCGTGG",4,19.71,6.25,-4.52,0.73,1.5,1.17,0.03,">1 nonsynonymous","V77Q R127D",2
"lib1","SARS-CoV-2","AGATCCGAGGTGCTAA",4,24.03,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G74S K94T",2
"lib1","SARS-CoV-2","AGATCCGCACCAAATA",8,85.54,6.07,-4.69,0.93,1.5,1.22,0.02,">1 nonsynonymous","S69G Y93F K132L",3
"lib1","SARS-CoV-2","AGATCCGGCGCAAAAT",1,15.89,6.2,-4.56,0.92,1.5,1.14,0.04,">1 nonsynonymous","N1M R27A A81D I138P F185L",5
"lib1","SARS-CoV-2","AGATCCTAACAAAAAC",1,26.63,9.34,-1.42,0.2,1.53,1.18,0.02,">1 nonsynonymous","D34W D97N R136L",3
"lib1","SARS-CoV-2","AGATCCTGTGGTTCAT",6,48.98,6.11,-4.65,0.94,1.5,1.3,0.02,">1 nonsynonymous","T3H A89Y Y123M P149I T201Q",5
"lib1","SARS-CoV-2","AGATCGAACAAATAGT",4,67.63,10.18,-0.58,0.03,2.91,1.04,0,">1 nonsynonymous","S29M Q144T",2
"lib1","SARS-CoV-2","AGATCGAACCAGAATG",3,30.91,7.84,-2.93,0.33,1.5,1.05,0.03,">1 nonsynonymous","S108K S129C",2
"lib1","SARS-CoV-2","AGATCGAACGAATACC",18,183.03,10.1,-0.66,0.09,2.2,1.03,0,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","AGATCGAAGTCAAAGG",2,8.29,8.14,-2.63,0.53,1.5,1,0.08,">1 nonsynonymous","S36M C49G P197A T201S",4
"lib1","SARS-CoV-2","AGATCGAATCACACGA",6,114.43,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G51F P96F T170R Q176L",4
"lib1","SARS-CoV-2","AGATCGAATTATAAAT",4,21.92,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","C61D P96D A105E L131Q",4
"lib1","SARS-CoV-2","AGATCGACCTCAGCCG",3,43.41,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F44I L95W Q176G V181S",4
"lib1","SARS-CoV-2","AGATCGAGCTGTAAAC",6,79.23,10.74,-0.03,0.05,2.86,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","AGATCGAGTTAGGCCT",5,326.49,6,-4.76,1.68,1.5,1.16,0.01,">1 nonsynonymous","D90S D137L G174S",3
"lib1","SARS-CoV-2","AGATCGATATCAATAT",6,93.93,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36L R124V",2
"lib1","SARS-CoV-2","AGATCGCAAAACGTAA",1,24.42,10.02,-0.75,0.24,1.96,1.09,0.02,"1 nonsynonymous","F17Q",1
"lib1","SARS-CoV-2","AGATCGCCGCAAGGTG",7,65.59,7.46,-3.31,0.31,1.5,1.14,0.02,">1 nonsynonymous","L5D W106C G152V F156I Q163A",5
"lib1","SARS-CoV-2","AGATCGCTCAATTGGT",5,47.77,7.96,-2.81,0.34,1.5,1.2,0.04,">1 nonsynonymous","F44Q I104N",2
"lib1","SARS-CoV-2","AGATCGCTGAAGGAAT",5,49.99,10.79,0.03,0.07,2.9,1.08,0,">1 nonsynonymous","L188W T201I",2
"lib1","SARS-CoV-2","AGATCGGAGCCCTCCA",5,56.25,6.3,-4.47,0.61,1.5,1.16,0.02,">1 nonsynonymous","S41A G51S Y159N",3
"lib1","SARS-CoV-2","AGATCGGCAGTATGGT",11,113.66,10.72,-0.05,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATCGGCGAATTACG",3,155.84,8.48,-2.28,0.11,2.08,1.11,0,">1 nonsynonymous","T46D I88V L125W F160L H189Q K199N",6
"lib1","SARS-CoV-2","AGATCGGTACTAATAA",8,5.31,NA,NA,NA,NA,NA,NA,"stop","I72F E141T F156*",3
"lib1","SARS-CoV-2","AGATCGGTCTATATCG",2,0,NA,NA,NA,NA,NA,NA,"stop","T46* V65L P149D A190V",4
"lib1","SARS-CoV-2","AGATCGTATGAAAAAA",1,5.76,10.59,-0.17,0.16,2.95,1,0.01,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","AGATCGTTTAATATAG",3,57.39,10.27,-0.49,0.07,2.7,1.07,0,">1 nonsynonymous","V32E S36M L187Q P191L",4
"lib1","SARS-CoV-2","AGATCTAAACGCGAGC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G N58A N64T P82W",4
"lib1","SARS-CoV-2","AGATCTAACCCCCATT",1,23.59,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6L Y35S A89W E135A Y143T P149K",6
"lib1","SARS-CoV-2","AGATCTAAGGGGTTAA",3,71.08,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A42G R124P I138A G166P F185I",5
"lib1","SARS-CoV-2","AGATCTAGAATATCGG",12,29.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y91C V103P K199R",3
"lib1","SARS-CoV-2","AGATCTAGGTTACTAA",4,10.88,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34Y P82E T100V V153S",4
"lib1","SARS-CoV-2","AGATCTCACCTTTTAA",3,27.95,10.74,-0.02,0.07,2.9,1.09,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","AGATCTCAGGGACTTT",4,17.86,9.99,-0.78,0.09,2.77,1,0,">1 nonsynonymous","A105S K114G",2
"lib1","SARS-CoV-2","AGATCTCCAGTATAAT",1,17.57,9.68,-1.09,0.19,1.93,1.13,0.01,">1 nonsynonymous","T55F Y91G",2
"lib1","SARS-CoV-2","AGATCTCCCTGTAATA",1,45.35,10.93,0.17,0.09,2.89,1.04,0,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","AGATCTCCGATGTTAT",1,10.6,8.61,-2.15,0.16,2.97,1.02,0.01,">1 nonsynonymous","T55N E141R T170D",3
"lib1","SARS-CoV-2","AGATCTCCTAAAAAAA",1,25.31,10.11,-0.65,0.1,2.68,1.04,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","AGATCTCCTTGCGTAA",9,1.31,NA,NA,NA,NA,NA,NA,"stop","T63G I80D N130Y A145* G152Y",5
"lib1","SARS-CoV-2","AGATCTCGACCGAATC",1,17.85,10.09,-0.67,0.13,3,1.04,0.01,">1 nonsynonymous","S139E P149V",2
"lib1","SARS-CoV-2","AGATCTCTGATATGCC",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C E76K",2
"lib1","SARS-CoV-2","AGATCTCTGCGAATGG",5,23.18,6.66,-4.1,0.35,1.5,1.16,0.02,">1 nonsynonymous","S53Y N58I Q84A T100Y N107L",5
"lib1","SARS-CoV-2","AGATCTGAACACGGCG",6,2.54,NA,NA,NA,NA,NA,NA,"stop","S53L G101* L131R E154H G174W",5
"lib1","SARS-CoV-2","AGATCTGCTATTCGCA",1,47.99,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N30M S36L S45R G51S Y91L G172D",6
"lib1","SARS-CoV-2","AGATCTGTAATTTTAC",3,32.42,10.8,0.03,0.07,2.87,1.06,0,"1 nonsynonymous","S36E",1
"lib1","SARS-CoV-2","AGATCTGTGCACGATC",2,13.89,10.87,0.1,0.09,2.97,1,0,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","AGATCTGTTTATCCGT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","D97S Y119P K132N P197R T201*",5
"lib1","SARS-CoV-2","AGATCTTAAAGGCCTG",4,94.14,8.01,-2.75,0.25,1.5,1.14,0.02,">1 nonsynonymous","A105I Q176M",2
"lib1","SARS-CoV-2","AGATCTTAACACGCCT",1,13.17,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T85Y G146I G172P A190C",4
"lib1","SARS-CoV-2","AGATCTTACCTTATTC",4,40.64,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F47A G86Y G116Y C150I S200A",5
"lib1","SARS-CoV-2","AGATCTTACGATTCAT",2,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q Y35T D59M G74A Q144H",5
"lib1","SARS-CoV-2","AGATCTTGCACATTTA",1,24.13,8.88,-1.89,0.26,1.57,1.2,0.03,">1 nonsynonymous","F17L N120Y Q168R",3
"lib1","SARS-CoV-2","AGATCTTGTCCTTCAA",7,117.58,9.2,-1.56,0.06,2.51,1.08,0,">1 nonsynonymous","T15C S41N P177A",3
"lib1","SARS-CoV-2","AGATCTTTAATTACAG",9,53.4,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","I88D",1
"lib1","SARS-CoV-2","AGATGAAAATCGGGAG",3,60.35,10.16,-0.61,0.07,2.69,1,0,">1 nonsynonymous","F44T S53Y T55D N120M",4
"lib1","SARS-CoV-2","AGATGAAACAATGATT",9,1.01,NA,NA,NA,NA,NA,NA,"stop","T3E E10A Y35N S41K N92* G166V",6
"lib1","SARS-CoV-2","AGATGAAAGACGGGAC",4,68.59,8.83,-1.94,0.18,1.5,1.08,0.02,">1 nonsynonymous","L38I V103L",2
"lib1","SARS-CoV-2","AGATGAAAGCATTCCA",7,33.15,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C6N S43R F167S A192L",4
"lib1","SARS-CoV-2","AGATGAAATAGAATAA",3,14.98,6.55,-4.22,0.62,1.5,1.13,0.05,">1 nonsynonymous","T15C Y39D Y123N",3
"lib1","SARS-CoV-2","AGATGAACACTCACAC",4,56.48,10.72,-0.05,0.05,2.96,1,0,"1 nonsynonymous","N4R",1
"lib1","SARS-CoV-2","AGATGAACAGATAGAG",7,120.71,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I88M S139R N157P",3
"lib1","SARS-CoV-2","AGATGAACCGGACTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib1","SARS-CoV-2","AGATGAACTGTTGGCA",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N A67S N130T C158R",4
"lib1","SARS-CoV-2","AGATGAAGTTTGAATG",5,17.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L V52R R179F",3
"lib1","SARS-CoV-2","AGATGAATATGCTTTA",2,16.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V T15S V65R G83H T100K T201P",6
"lib1","SARS-CoV-2","AGATGAATCTACATTA",2,10.08,6,-4.76,1.99,3,1.02,0,">1 nonsynonymous","I2L S113Q S139W N157P",4
"lib1","SARS-CoV-2","AGATGAATCTGGTCGC",3,25.67,7.66,-3.1,0.29,1.5,1.12,0.03,">1 nonsynonymous","C6W C102I",2
"lib1","SARS-CoV-2","AGATGAATGAAATATG",4,52.09,9.36,-1.4,0.08,2.82,1.07,0,">1 nonsynonymous","G146T Q168S",2
"lib1","SARS-CoV-2","AGATGAATTTTAGCGG",2,30.94,10.57,-0.19,0.07,2.87,1.02,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","AGATGACAAGATAATG",4,110.33,8.88,-1.88,0.09,2.83,1.11,0,"1 nonsynonymous","Y143T",1
"lib1","SARS-CoV-2","AGATGACAAGGTTTTG",1,0.67,NA,NA,NA,NA,NA,NA,"stop","A14K W23L Y119*",3
"lib1","SARS-CoV-2","AGATGACAAGTAATGA",3,42.38,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y21A C31Y Y39G C61I",4
"lib1","SARS-CoV-2","AGATGACAATGTTGGT",2,36.86,9.9,-0.86,0.09,2.41,1.03,0,">1 nonsynonymous","S45L L95I S129R",3
"lib1","SARS-CoV-2","AGATGACAGTTGTTAT",1,51.28,10.01,-0.75,0.12,2.5,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGATGACATTTAGACA",1,26.21,10.67,-0.09,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATGACCAGGCGTGA",3,16.64,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F17T W23R N120C E141R",4
"lib1","SARS-CoV-2","AGATGACCTGACCATC",3,15.24,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","E141T F167I",2
"lib1","SARS-CoV-2","AGATGACGAAAACGAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","S19R K94* F134* V173L T201C",5
"lib1","SARS-CoV-2","AGATGACGACTTCCGT",1,5.2,NA,NA,NA,NA,NA,0.23,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","AGATGACTCGGTTGAA",3,42.31,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T3A S19Q R127L",3
"lib1","SARS-CoV-2","AGATGACTGAGATCAT",3,60.59,10.36,-0.4,0.04,2.91,1.04,0,"1 nonsynonymous","F47C",1
"lib1","SARS-CoV-2","AGATGAGAACCTTATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q D90P E141A C158L",4
"lib1","SARS-CoV-2","AGATGAGAATGAGAAA",5,35.08,9.22,-1.54,0.26,1.5,1.12,0.05,">1 nonsynonymous","L5C P96M",2
"lib1","SARS-CoV-2","AGATGAGACTTTGTTA",11,233.53,10.76,0,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATGAGGAAAATTCG",2,12.2,10.99,0.22,0.11,2.92,1,0,"1 nonsynonymous","S113A",1
"lib1","SARS-CoV-2","AGATGAGGTAGGGTTC",4,10.2,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N92V C102G Q168R",3
"lib1","SARS-CoV-2","AGATGAGTGAAGGGAC",2,40.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4R E10A Y35K Q84E N92K",5
"lib1","SARS-CoV-2","AGATGAGTTCTTGTAA",2,8.21,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6G A105T P161A",3
"lib1","SARS-CoV-2","AGATGATAAAATTGAA",3,9.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16Q L60C F99H N151K",4
"lib1","SARS-CoV-2","AGATGATAACTTCAAT",9,135.44,9.78,-0.99,0.06,2.44,1.08,0,">1 nonsynonymous","K56M I72T I142L",3
"lib1","SARS-CoV-2","AGATGATAATGCTGCA",2,54.87,10.62,-0.14,0.04,2.97,1.03,0,">1 nonsynonymous","T55N L60G S129G",3
"lib1","SARS-CoV-2","AGATGATACAAGTAAA",1,44.47,10.67,-0.09,0.06,2.88,1.08,0,">1 nonsynonymous","I2P G9S N64R",3
"lib1","SARS-CoV-2","AGATGATATATACGAA",2,29.28,10.68,-0.08,0.03,2.97,1,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","AGATGATATCAGCATA",1,24.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y121T N157L",2
"lib1","SARS-CoV-2","AGATGATATTACTATA",3,17.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D112E L162T",2
"lib1","SARS-CoV-2","AGATGATCCAATGAAA",2,17.11,10.33,-0.43,0.08,2.97,1.01,0,">1 nonsynonymous","R27V G155H",2
"lib1","SARS-CoV-2","AGATGATGTAAAAGTA",8,201.8,6.01,-4.76,0.67,1.5,1.17,0.01,">1 nonsynonymous","K94E Q144K",2
"lib1","SARS-CoV-2","AGATGATGTCTAAAAC",2,66.37,10.7,-0.06,0.07,2.94,1.03,0,">1 nonsynonymous","S41Q A105S",2
"lib1","SARS-CoV-2","AGATGCAAGCTATAAA",20,191.97,10.83,0.07,0.06,2.89,1.06,0,">1 nonsynonymous","N1L C61P Q163V",3
"lib1","SARS-CoV-2","AGATGCAATAGTGTGT",3,36.4,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C61Y T85K Y165V P177R",4
"lib1","SARS-CoV-2","AGATGCACCATAAGCA",3,0.78,NA,NA,NA,NA,NA,NA,"stop","P7S A42T G101*",3
"lib1","SARS-CoV-2","AGATGCACGAATATAC",7,1.01,NA,NA,NA,NA,NA,NA,"stop","L95I W106M E141* E154G P169R S200H",6
"lib1","SARS-CoV-2","AGATGCACTGATCCCG",2,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G P149F",2
"lib1","SARS-CoV-2","AGATGCAGAGGCCCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27M T85L S129*",3
"lib1","SARS-CoV-2","AGATGCAGATAATCTC",4,26.06,6.43,-4.33,0.46,1.5,1.17,0.02,">1 nonsynonymous","C6S E10A Y35I N107H",4
"lib1","SARS-CoV-2","AGATGCAGATCCGGGA",2,83.61,9.19,-1.58,0.06,2.79,1.13,0,">1 nonsynonymous","A105T S139G T170G",3
"lib1","SARS-CoV-2","AGATGCAGTCGGCCAT",9,149.68,10.73,-0.03,0.04,2.93,1.03,0,">1 nonsynonymous","D59N T148S",2
"lib1","SARS-CoV-2","AGATGCCAATGTATCG",4,46.68,10.47,-0.29,0.05,2.84,1.03,0,">1 nonsynonymous","S41L S45K",2
"lib1","SARS-CoV-2","AGATGCCAGAATATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M D68G N118M T201P",4
"lib1","SARS-CoV-2","AGATGCCATACAGTAG",2,1.05,NA,NA,NA,NA,NA,NA,"stop","T3I S69* P96L N107E V115C N151S G155N P177H T201M",9
"lib1","SARS-CoV-2","AGATGCCCCGCAGATG",2,13.51,10.07,-0.7,0.21,2.24,1.16,0.02,">1 nonsynonymous","E10A A18G K26L N120K P149S F156W",6
"lib1","SARS-CoV-2","AGATGCCCGTTTTCTT",4,56.79,8.5,-2.26,0.19,1.84,1.12,0.01,">1 nonsynonymous","E154S Y165V",2
"lib1","SARS-CoV-2","AGATGCCTAAGATTTC",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S T46R A89G S139N G152D",5
"lib1","SARS-CoV-2","AGATGCCTCTCACACA",5,18.54,6.98,-3.78,0.47,1.5,1.04,0.04,">1 nonsynonymous","C61T Y91A D97G A105Y",4
"lib1","SARS-CoV-2","AGATGCCTGAAATCTT",3,17.97,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","AGATGCCTTCTAGGTA",3,27.22,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T15M V37I G51R D97M D137R G155H",6
"lib1","SARS-CoV-2","AGATGCCTTGGCTGGT",2,39.76,8.72,-2.05,0.14,2.6,1.1,0.01,">1 nonsynonymous","D98A G166L",2
"lib1","SARS-CoV-2","AGATGCGAAAGGACCA",1,5.18,7.71,-3.06,0.42,1.5,1,0.02,">1 nonsynonymous","I2S A42R C150S",3
"lib1","SARS-CoV-2","AGATGCGAAATTTCAT",2,38.47,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","V20S L38D T85N F134G",4
"lib1","SARS-CoV-2","AGATGCGACTTATAAA",2,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95W I104E T201S",3
"lib1","SARS-CoV-2","AGATGCGCATTCGGGA",2,16.9,10.73,-0.04,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATGCGCCAAGTATC",5,10.45,6.48,-4.28,0.4,3,1.26,0.02,">1 nonsynonymous","N1T E10P T15P N40L T63P R124N G152F",7
"lib1","SARS-CoV-2","AGATGCGGCGTCTATA",2,11.04,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15N C61V E76S Y143L N157F",5
"lib1","SARS-CoV-2","AGATGCGGTGCAATAT",3,61.6,10.74,-0.02,0.05,2.88,1.08,0,"1 nonsynonymous","R78A",1
"lib1","SARS-CoV-2","AGATGCGTGCCCATCA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","S45* A81S S129F E141A",4
"lib1","SARS-CoV-2","AGATGCTAAATCAAGT",4,37.47,6,-4.76,2,1.5,1.28,0.01,">1 nonsynonymous","V77F G146C E154T E186D",4
"lib1","SARS-CoV-2","AGATGCTACATGATAT",1,26.57,6,-4.76,0.56,3,1.2,0,">1 nonsynonymous","D34A G83S N107R S129N G174M",5
"lib1","SARS-CoV-2","AGATGCTATATATGAA",1,12.2,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8P P82E G86V L131I S184V",5
"lib1","SARS-CoV-2","AGATGCTATGAAGGGG",4,90.68,9.75,-1.02,0.11,2.23,1.06,0,">1 nonsynonymous","N64R E135W",2
"lib1","SARS-CoV-2","AGATGCTATGGAATAA",1,6.9,6.33,-4.43,1.41,1.5,1.05,0.02,"1 nonsynonymous","V103Y",1
"lib1","SARS-CoV-2","AGATGCTCCCTACTAA",3,1.07,NA,NA,NA,NA,NA,NA,"stop","F8* G172*",2
"lib1","SARS-CoV-2","AGATGCTCCTGGTATC",7,82.05,10.22,-0.55,0.05,2.96,1,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","AGATGCTGTAGCTCCG",1,5,6,-4.76,2,3,1.18,0.02,">1 nonsynonymous","K48R V103G E141I Q176T",4
"lib1","SARS-CoV-2","AGATGCTTGAACCTAG",1,25.73,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","E10V L38Q Y91S F134C S184Q",5
"lib1","SARS-CoV-2","AGATGGAACATCCGGT",2,14.1,8.83,-1.93,0.22,1.5,1.2,0.02,">1 nonsynonymous","Y50L T148L",2
"lib1","SARS-CoV-2","AGATGGAATAACAGAT",9,197.72,10.22,-0.55,0.08,2.57,1.01,0,">1 nonsynonymous","N1R N30H A89T",3
"lib1","SARS-CoV-2","AGATGGAATTATCCGA",11,59.99,6.8,-3.96,0.28,1.5,1.22,0.02,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","AGATGGAGGAAGATTA",6,2.98,NA,NA,NA,NA,NA,NA,"stop","Y39S L162W C195*",3
"lib1","SARS-CoV-2","AGATGGAGTGAACACG",4,18.12,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N64Y V77G P82V P169Y",4
"lib1","SARS-CoV-2","AGATGGATCTGATTTC",2,38.85,9.95,-0.82,0.07,2.79,1.02,0,"1 nonsynonymous","Y159F",1
"lib1","SARS-CoV-2","AGATGGATTAGTATTA",5,98.25,10.75,-0.01,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATGGATTCCCGAGA",4,83.11,6,-4.76,0.86,1.5,1.13,0.01,">1 nonsynonymous","V65W K128F I142E C150S G196V",5
"lib1","SARS-CoV-2","AGATGGATTGAGCCAT",4,182.22,8.04,-2.72,0.17,1.59,1.12,0.01,"1 nonsynonymous","Q176Y",1
"lib1","SARS-CoV-2","AGATGGCAATTACCTA",5,73.29,8.41,-2.35,0.12,2.16,1.13,0.01,">1 nonsynonymous","L57S Y119W",2
"lib1","SARS-CoV-2","AGATGGCACCCAAACG",4,46.65,10.5,-0.26,0.05,2.94,1.03,0,">1 nonsynonymous","G116N I138E A192K",3
"lib1","SARS-CoV-2","AGATGGCACTATACAA",3,51.01,8.19,-2.57,0.41,1.5,1,0.08,">1 nonsynonymous","G74P D90T R127W",3
"lib1","SARS-CoV-2","AGATGGCATATAATAA",7,94.63,10.76,0,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATGGCGGACTTCAA",3,353.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5Y I28P N118L P197R",4
"lib1","SARS-CoV-2","AGATGGCTTCAGTAAA",1,10.94,10.61,-0.15,0.14,2.86,1,0.01,"1 nonsynonymous","K26L",1
"lib1","SARS-CoV-2","AGATGGGATGACGACA",6,63.21,10.09,-0.68,0.12,2.18,1.06,0.01,">1 nonsynonymous","D97S E135I",2
"lib1","SARS-CoV-2","AGATGGGCGATTGAAA",11,100.75,6.78,-3.99,0.35,1.5,1.16,0.02,">1 nonsynonymous","F12A N64R D90R V153S Y159H",5
"lib1","SARS-CoV-2","AGATGGGCTACTATGA",3,27.32,9.7,-1.06,0.13,2.31,1.02,0.01,">1 nonsynonymous","D34H F99W I138S",3
"lib1","SARS-CoV-2","AGATGGTCAAAGAGAA",1,8.12,10.79,0.02,0.14,2.87,1.02,0.02,"wildtype","",0
"lib1","SARS-CoV-2","AGATGGTCAAGTATAA",2,2.86,NA,NA,NA,NA,NA,NA,"stop","N4D V71* D98Q N118D",4
"lib1","SARS-CoV-2","AGATGGTCTCGTTGGG",1,5.48,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","D34Y K87L S113M G166Y",4
"lib1","SARS-CoV-2","AGATGTAAAAAGAAAT",2,40.58,8.75,-2.01,0.08,2.85,1.12,0,">1 nonsynonymous","L5K N171R",2
"lib1","SARS-CoV-2","AGATGTAAAAGGAACT",3,34.02,8.16,-2.61,0.16,1.57,1.07,0.01,">1 nonsynonymous","A42T G86S G174R",3
"lib1","SARS-CoV-2","AGATGTAAAGTGTGGT",1,38.36,10.68,-0.08,0.08,2.95,1.05,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","AGATGTAACATACACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGATGTAACTAATAAT",5,210.96,10.1,-0.66,0.04,2.94,1,0,">1 nonsynonymous","G9L K48R I104M F156A",4
"lib1","SARS-CoV-2","AGATGTAAGCTTCAGC",4,73.87,10.69,-0.07,0.07,2.88,1.03,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","AGATGTACCTCTAACG",5,24.05,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V103A E135T E141P",3
"lib1","SARS-CoV-2","AGATGTACTTGATAGG",1,15.16,6.12,-4.64,0.62,2.8,1.26,0.01,">1 nonsynonymous","E10T C49M A190T",3
"lib1","SARS-CoV-2","AGATGTAGCAGGACGT",12,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26V P54T S113V E141T F167T",5
"lib1","SARS-CoV-2","AGATGTAGTTAATTGC",4,83.86,10.81,0.05,0.08,2.92,1.05,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","AGATGTCAAGAAGATT",1,19.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P F99T N157P",3
"lib1","SARS-CoV-2","AGATGTCACCACTTAT",5,0.44,NA,NA,NA,NA,NA,NA,"stop","N4L V71Q I142*",3
"lib1","SARS-CoV-2","AGATGTCAGGTGAAAA",5,55.88,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I88M D98T V115L R127Q G152A",5
"lib1","SARS-CoV-2","AGATGTCCCTTCAATA",10,2.15,NA,NA,NA,NA,NA,NA,"stop","I2L A18G F99A W106*",4
"lib1","SARS-CoV-2","AGATGTCCGTAGTCAC",1,26.59,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P96R G155R V180G",3
"lib1","SARS-CoV-2","AGATGTCCGTTATGCA",4,28.28,6.82,-3.95,0.28,1.5,1.07,0.03,">1 nonsynonymous","A14V G155F G166I",3
"lib1","SARS-CoV-2","AGATGTCGATGTGTCA",6,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I D90P L95I N171W",4
"lib1","SARS-CoV-2","AGATGTGAAAATAGTA",4,47.39,6,-4.76,2,3,1.18,0,">1 nonsynonymous","W23R L57S A89C",3
"lib1","SARS-CoV-2","AGATGTGACCATTCGG",3,5.55,8.98,-1.79,0.37,1.5,1,0.04,">1 nonsynonymous","C49A L122M V153I Q163H",4
"lib1","SARS-CoV-2","AGATGTGCATATTCGA",6,88.67,6.65,-4.11,0.26,1.5,1.19,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","AGATGTGCCGAACCGC",10,58.11,6,-4.76,1,1.5,1.13,0.01,">1 nonsynonymous","D90N W106R D137F",3
"lib1","SARS-CoV-2","AGATGTGCTAACAAGA",3,32.46,10.58,-0.18,0.08,2.81,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","AGATGTGGAACCAGGA",2,12.96,9.14,-1.62,0.19,1.97,1.08,0.01,">1 nonsynonymous","L122I P161Q T201D",3
"lib1","SARS-CoV-2","AGATGTGGCATCTTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","F8H V77A A105* L183N",4
"lib1","SARS-CoV-2","AGATGTGTCTGGACTA",1,30.89,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P82K T100D Y119V R136S P177M",5
"lib1","SARS-CoV-2","AGATGTTATAAGAAAC",4,39.52,8.12,-2.64,0.27,1.52,1.23,0.02,">1 nonsynonymous","N40S C49V N64E K87R",4
"lib1","SARS-CoV-2","AGATGTTCATAAACTT",8,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I A14S A105V F167V",4
"lib1","SARS-CoV-2","AGATGTTGACACCATT",4,20.29,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41N D137F Y165T",3
"lib1","SARS-CoV-2","AGATGTTGATAAATAA",4,12618.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P161L T201V",2
"lib1","SARS-CoV-2","AGATGTTGCGTTGTCA",2,116.94,10.55,-0.22,0.04,2.87,1.04,0,">1 nonsynonymous","S41L T46S K198V",3
"lib1","SARS-CoV-2","AGATGTTTTGTCCGCA",4,85.28,10.71,-0.06,0.04,2.94,1.02,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","AGATTAAAAAACGGTA",4,44.48,10.7,-0.07,0.09,2.89,1.1,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","AGATTAAAAACAAGTT",1,22.52,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A14L T55W V182A",3
"lib1","SARS-CoV-2","AGATTAAAAACACTCA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","T3V D34A K48* R78K A81E",5
"lib1","SARS-CoV-2","AGATTAAAAATTTGAC",2,22,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","P7F S36K D75V N157H",4
"lib1","SARS-CoV-2","AGATTAAAACCTTATA",6,38.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19P F62M L95T N118V T201I",5
"lib1","SARS-CoV-2","AGATTAAAAGGACTTA",1,14.01,9.13,-1.64,0.2,1.7,1.06,0.02,">1 nonsynonymous","C31R G174N F185C S200I",4
"lib1","SARS-CoV-2","AGATTAAACAAAAAGC",2,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V F62V A67S W106K",4
"lib1","SARS-CoV-2","AGATTAAACGATCCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib1","SARS-CoV-2","AGATTAAAGAAGGCCC",2,75.58,9.08,-1.69,0.11,2.35,1.12,0.01,">1 nonsynonymous","R27L D97S N107E",3
"lib1","SARS-CoV-2","AGATTAAAGACCTGAG",2,126.93,10.33,-0.43,0.04,2.85,1.04,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","AGATTAAAGTGATTAT",1,47.88,10.43,-0.33,0.07,2.86,1,0,">1 nonsynonymous","V71L T148S",2
"lib1","SARS-CoV-2","AGATTAAATTATTCTG",4,26.83,10.8,0.04,0.07,2.96,1.02,0,"1 nonsynonymous","T3F",1
"lib1","SARS-CoV-2","AGATTAACACCCGCAT",16,126.92,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C49G I80W F99I A105L",4
"lib1","SARS-CoV-2","AGATTAACGCCAAATT",4,114.22,10.76,0,0.04,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTAACGTCTACAG",7,87.18,10.33,-0.43,0.08,2.89,1.02,0,">1 nonsynonymous","F47L K128G",2
"lib1","SARS-CoV-2","AGATTAACTCATTAAA",1,0.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","AGATTAACTCGTAAAT",3,82.02,10.25,-0.52,0.04,2.84,1.03,0,">1 nonsynonymous","A18T C61V",2
"lib1","SARS-CoV-2","AGATTAACTTAGAAAA",1,29.09,9.91,-0.86,0.11,1.95,1.1,0,">1 nonsynonymous","G83L F99Y",2
"lib1","SARS-CoV-2","AGATTAACTTGACTCT",1,2.06,NA,NA,NA,NA,NA,NA,"stop","Y21* D34P A81T D90N",4
"lib1","SARS-CoV-2","AGATTAAGACGATTAC",7,108.84,10.27,-0.5,0.05,2.83,1.02,0,">1 nonsynonymous","T3R G116V N130E",3
"lib1","SARS-CoV-2","AGATTAAGACTTACAC",1,42.07,10.59,-0.17,0.06,2.97,1.03,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","AGATTAAGATGCGGTA",10,102.2,10.75,-0.02,0.07,2.87,1.06,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","AGATTAAGCGTCCTCA",9,87.7,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49M K56M D75L P82L T100H N157K",6
"lib1","SARS-CoV-2","AGATTAATAAAATATC",4,100.4,10.68,-0.09,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTAATAGAACGAC",2,0.58,NA,NA,NA,NA,NA,NA,"stop","T15E W23* L38* V65G P82T I138D",6
"lib1","SARS-CoV-2","AGATTAATCAAATATG",3,0.46,NA,NA,NA,NA,NA,NA,"stop","I2P Q176* G196L",3
"lib1","SARS-CoV-2","AGATTAATCTTGGATG",2,0.9,NA,NA,NA,NA,NA,NA,"stop","G152A P161A T170L S200*",4
"lib1","SARS-CoV-2","AGATTAATTCCAGACT",2,9.77,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","I88Y L95R",2
"lib1","SARS-CoV-2","AGATTACAATGACATG",8,111.03,8.4,-2.37,0.1,2.21,1.12,0,">1 nonsynonymous","V71L Y119C",2
"lib1","SARS-CoV-2","AGATTACACAGAGGAA",6,123.65,9.52,-1.24,0.09,2.43,1.1,0,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","AGATTACAGTATAAAT",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L L122S I138C",3
"lib1","SARS-CoV-2","AGATTACCAAGCAAAT",2,56.82,10.72,-0.04,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTACCCTCCGAAA",5,2.15,NA,NA,NA,NA,NA,NA,"stop","P7N W23A N120* F167L",4
"lib1","SARS-CoV-2","AGATTACCTAAGTATA",2,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54W P197R",2
"lib1","SARS-CoV-2","AGATTACCTAGGGGAT",1,0.52,NA,NA,NA,NA,NA,NA,"stop","I88L N120* T201*",3
"lib1","SARS-CoV-2","AGATTACCTTACAAAC",2,73.83,10.03,-0.74,0.08,2.65,1,0,">1 nonsynonymous","P7T G51S",2
"lib1","SARS-CoV-2","AGATTACGACTAATGC",1,15.97,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64G I80L L131M P161L S200I",5
"lib1","SARS-CoV-2","AGATTACGAGACGAGA",1,17.29,10.07,-0.7,0.09,2.89,1.01,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","AGATTACTAGCAAATA",3,25.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F62T P82A V103F",3
"lib1","SARS-CoV-2","AGATTACTGGGTCTGG",6,2.23,NA,NA,NA,NA,NA,NA,"stop","S43G N107* N151W",3
"lib1","SARS-CoV-2","AGATTACTTTGATAAA",1,32.52,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F12M D137H T170F R179F",4
"lib1","SARS-CoV-2","AGATTAGAAAACCTTT",2,64.28,10.76,0,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTAGAAAGATACA",2,24.6,10.7,-0.06,0.07,2.83,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTAGAATGGTTTG",4,17.79,9.89,-0.88,0.15,2.38,1.03,0.01,">1 nonsynonymous","S43I F167Y H189I",3
"lib1","SARS-CoV-2","AGATTAGAGAATAATT",10,168.14,8.83,-1.93,0.08,2.56,1.12,0,">1 nonsynonymous","C31S Y159W",2
"lib1","SARS-CoV-2","AGATTAGCACTTTCGT",1,6.72,9.75,-1.02,0.3,1.85,1.15,0.03,">1 nonsynonymous","S19G P54T K132L V153Y P197Q",5
"lib1","SARS-CoV-2","AGATTAGCGAATGAAC",3,10.09,10.04,-0.73,0.06,3,1,0,">1 nonsynonymous","N118T K128A",2
"lib1","SARS-CoV-2","AGATTAGGAACTCCAA",6,106.68,10.76,-0.01,0.07,2.87,1.07,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","AGATTAGGATCATGAC",2,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P N130S",2
"lib1","SARS-CoV-2","AGATTAGTATTGAAAG",9,86.82,8.55,-2.22,0.11,2.75,1.03,0,">1 nonsynonymous","T3S Y35M S113Y",3
"lib1","SARS-CoV-2","AGATTAGTCCTAGAAC",2,6.23,10.36,-0.41,0.08,2.86,1.02,0,"1 nonsynonymous","L57T",1
"lib1","SARS-CoV-2","AGATTAGTGATACCAG",5,188.07,8.09,-2.67,0.11,2.02,1.12,0,">1 nonsynonymous","T3Y N40D K48C Y175S",4
"lib1","SARS-CoV-2","AGATTATCATACTAAT",3,89.58,9.86,-0.91,0.14,2.04,1.1,0.01,">1 nonsynonymous","S19Q S41L",2
"lib1","SARS-CoV-2","AGATTATGCTGAGTAA",6,94.55,9.85,-0.92,0.15,1.89,1.09,0.01,">1 nonsynonymous","T15A A105I",2
"lib1","SARS-CoV-2","AGATTATGGACCTTAA",3,41.79,10.72,-0.05,0.08,2.79,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTATGGATCCCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","N40I K56Q K94L A105E N130* L183E",6
"lib1","SARS-CoV-2","AGATTATGTAGTCATT",1,24.96,9.53,-1.24,0.18,1.75,1.2,0.01,">1 nonsynonymous","D34V G83R E154C",3
"lib1","SARS-CoV-2","AGATTATGTGTACCTG",2,30.55,9.08,-1.68,0.37,1.5,1.02,0.05,">1 nonsynonymous","F44H G51I",2
"lib1","SARS-CoV-2","AGATTATTGGGGGTAT",2,4.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55D",1
"lib1","SARS-CoV-2","AGATTATTTATTAACC",3,12.92,10.64,-0.12,0.13,2.87,1.07,0.01,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","AGATTCAAACAATGGC",2,20.68,10.74,-0.03,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTCAACCTAACTT",9,139.58,10.17,-0.59,0.04,2.87,1.03,0,">1 nonsynonymous","K87S N109L",2
"lib1","SARS-CoV-2","AGATTCAATCTAGTTA",2,1,NA,NA,NA,NA,NA,NA,"stop","C6Y I28* A89N R127Q H189C",5
"lib1","SARS-CoV-2","AGATTCAATGTTCATA",2,16.63,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N13T G86Q Y143S",3
"lib1","SARS-CoV-2","AGATTCACAAAAGAAC",9,152.27,10.71,-0.05,0.07,2.88,1.09,0,">1 nonsynonymous","F62W G83F",2
"lib1","SARS-CoV-2","AGATTCACAAGATGCT",11,19.46,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13T P82F G86I Y91H N130F",5
"lib1","SARS-CoV-2","AGATTCACGAGAAATC",2,11.96,10.76,-0.01,0.07,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTCAGAATATAAA",3,0.72,NA,NA,NA,NA,NA,NA,"stop","N40I S45* K56N C150I T170V",5
"lib1","SARS-CoV-2","AGATTCATACTGAGGA",2,8.99,10.63,-0.14,0.45,2.49,1,0.04,"1 nonsynonymous","K198G",1
"lib1","SARS-CoV-2","AGATTCATAGCGATAG",1,54.55,6,-4.76,2,1.5,1.41,0.06,">1 nonsynonymous","V20N G86W V173S",3
"lib1","SARS-CoV-2","AGATTCATGGAATTTT",7,48.11,7.96,-2.81,0.3,1.5,1.21,0.03,">1 nonsynonymous","G9R L38R W106F",3
"lib1","SARS-CoV-2","AGATTCATTTCGCAAT",8,98.6,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6Q F17Q G74E N130S S139T",5
"lib1","SARS-CoV-2","AGATTCCAAACTTGAT",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q P96L T201R",3
"lib1","SARS-CoV-2","AGATTCCACCATTCAC",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P G146L L162V",3
"lib1","SARS-CoV-2","AGATTCCACTACTGGT",3,34.58,10.05,-0.72,0.14,2.37,1.02,0.01,">1 nonsynonymous","E10N F62D",2
"lib1","SARS-CoV-2","AGATTCCATCCAACCA",4,67.46,9.38,-1.38,0.09,2.51,1.12,0,">1 nonsynonymous","N13S G116T G155S",3
"lib1","SARS-CoV-2","AGATTCCATCGCAGGC",3,9.24,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F17A Y35E G86M",3
"lib1","SARS-CoV-2","AGATTCCCAAAACCTT",18,7.72,NA,NA,NA,NA,NA,NA,"stop","C6V K48* E76T F99Q Y159Q",5
"lib1","SARS-CoV-2","AGATTCCGCTAGTGAT",3,37.62,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","AGATTCCGTTATAGAA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","A81R G86* V115S S139F F156T",5
"lib1","SARS-CoV-2","AGATTCCTTTCAACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119Q D137V",3
"lib1","SARS-CoV-2","AGATTCGACACGTTGA",3,25.25,8.8,-1.96,0.22,1.5,1.12,0.01,">1 nonsynonymous","C6R V11T T55F T201Q",4
"lib1","SARS-CoV-2","AGATTCGACACTACTG",1,6.3,7.6,-3.16,0.36,1.5,1.11,0.05,">1 nonsynonymous","G86Q N157M",2
"lib1","SARS-CoV-2","AGATTCGACGCCGGGA",2,61.53,10.77,0.01,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTCGACGGTGATC",1,20.58,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","R78C A105P L125H N151L T170L",5
"lib1","SARS-CoV-2","AGATTCGGGGAATAAA",5,27.76,8.62,-2.15,0.1,3,1.05,0,">1 nonsynonymous","V37T S113H N130P",3
"lib1","SARS-CoV-2","AGATTCGTATTAATGA",3,23.93,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R124L C158G S200R",3
"lib1","SARS-CoV-2","AGATTCTAAAGAACAA",5,28.05,6.31,-4.45,0.39,1.5,1.07,0.01,">1 nonsynonymous","G86V D112Y K199L",3
"lib1","SARS-CoV-2","AGATTCTACCCGCATG",3,39.73,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12G F44C I142N F156S R179K",5
"lib1","SARS-CoV-2","AGATTCTCCTAAATCA",2,19.12,6,-4.76,2,1.5,1.23,0.06,"1 nonsynonymous","I88N",1
"lib1","SARS-CoV-2","AGATTCTGAAGTTGAC",3,37.16,10.85,0.09,0.06,2.95,1.03,0,"1 nonsynonymous","L5M",1
"lib1","SARS-CoV-2","AGATTCTGCTCACGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S P133W",2
"lib1","SARS-CoV-2","AGATTCTGCTTTATCT",2,61.25,9.02,-1.74,0.08,2.74,1.17,0,">1 nonsynonymous","F44V T170R",2
"lib1","SARS-CoV-2","AGATTCTTAAACAAAC",1,9.77,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","I2H A14P S36V Y66K",4
"lib1","SARS-CoV-2","AGATTGAATATCAAAA",3,0.12,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","AGATTGACAAGATATT",3,23.71,10.87,0.1,0.11,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTGACACTCGCTG",10,196.41,10.7,-0.06,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTGACGAAAACGA",1,5.18,7.75,-3.02,0.41,1.57,1.31,0.05,">1 nonsynonymous","S41M Y91S T170F",3
"lib1","SARS-CoV-2","AGATTGACGACATACC",2,9.1,10.91,0.15,0.08,2.89,1.06,0,"1 nonsynonymous","N1T",1
"lib1","SARS-CoV-2","AGATTGACGGAGTATA",3,49.66,8.5,-2.27,0.12,2.63,1.15,0,">1 nonsynonymous","C31G Y119F",2
"lib1","SARS-CoV-2","AGATTGAGCCCTCAGA",8,56.92,10.78,0.02,0.07,2.88,1.08,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","AGATTGAGTGTAAGAC",6,2.36,NA,NA,NA,NA,NA,NA,"stop","Y50V D75* I88P P96Y S147D",5
"lib1","SARS-CoV-2","AGATTGCACATCATTG",2,12.28,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V11I A33C C61A P133H C158V",5
"lib1","SARS-CoV-2","AGATTGCATAGACTTT",2,51.81,8.47,-2.29,0.26,1.71,1.22,0.02,">1 nonsynonymous","F12V T63V F126L P169A",4
"lib1","SARS-CoV-2","AGATTGCCAATTAACT",2,17.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N1V Y93D G117L P133A",4
"lib1","SARS-CoV-2","AGATTGCTAACAAATA",7,48.79,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","A81L G101D Y143L T201L",4
"lib1","SARS-CoV-2","AGATTGCTTGTCTGCG",2,2.86,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","AGATTGGAGAATCTCG",4,1.67,NA,NA,NA,NA,NA,NA,"stop","V37* A89P F160R",3
"lib1","SARS-CoV-2","AGATTGGATGAATCCA",5,75.79,9.74,-1.02,0.05,2.8,1.04,0,">1 nonsynonymous","L5F S43L A89C G174L",4
"lib1","SARS-CoV-2","AGATTGGTAAAACTTT",3,60.45,10.62,-0.14,0.11,2.83,1.01,0,">1 nonsynonymous","D97V T148L",2
"lib1","SARS-CoV-2","AGATTGGTACGGTATA",1,10.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50N Y93W V181S",3
"lib1","SARS-CoV-2","AGATTGTAAAGTTGAC",4,39.06,10.36,-0.41,0.05,2.9,1.03,0,"1 nonsynonymous","R127K",1
"lib1","SARS-CoV-2","AGATTGTACAATCCCT",1,6.68,10.25,-0.51,0.16,2.87,1,0.01,">1 nonsynonymous","N58Y P149H",2
"lib1","SARS-CoV-2","AGATTGTACCTAGTTA",3,65.07,10.73,-0.03,0.04,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTGTACGAAGCCA",2,24.67,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L95H Q163E",2
"lib1","SARS-CoV-2","AGATTGTTCCGAGGCG",3,77.88,10.8,0.03,0.07,2.94,1.04,0,">1 nonsynonymous","V32W L122T S129D",3
"lib1","SARS-CoV-2","AGATTGTTCTCATGGA",1,129.36,10.77,0.01,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTGTTTGGCACGG",1,7.7,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P82D S129P T148F",3
"lib1","SARS-CoV-2","AGATTTAAAACTTATA",3,56.5,10.81,0.04,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTTAAAAGTAAAT",2,4.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","AGATTTAAAGAAGTTC",2,90.21,10.11,-0.65,0.05,2.83,1.04,0,"1 nonsynonymous","G155Y",1
"lib1","SARS-CoV-2","AGATTTAAATACATAA",8,170.27,8.83,-1.93,0.13,2.5,1.14,0.01,">1 nonsynonymous","R78W Q176M C195S",3
"lib1","SARS-CoV-2","AGATTTAACTGACGCT",2,6.37,9.9,-0.87,0.25,2.4,1.16,0.02,">1 nonsynonymous","L60N Q168L",2
"lib1","SARS-CoV-2","AGATTTAAGAAAAGCT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","F8L D68* Y178H",3
"lib1","SARS-CoV-2","AGATTTAAGGTACATC",1,15.35,10.33,-0.43,0.08,2.79,1.07,0,">1 nonsynonymous","S43L L60P",2
"lib1","SARS-CoV-2","AGATTTACATATCTCA",1,11.92,9.67,-1.09,0.34,2.65,1,0.02,">1 nonsynonymous","T46I V52L G117S L188N",4
"lib1","SARS-CoV-2","AGATTTACCCCCAAAG",4,57.18,6.03,-4.74,1.13,1.5,1.12,0.03,">1 nonsynonymous","N107C G172I",2
"lib1","SARS-CoV-2","AGATTTACGCGAGATG",8,1.82,NA,NA,NA,NA,NA,NA,"stop","K26T Y39I D68* E76K L95V A105T V173S L188Q",8
"lib1","SARS-CoV-2","AGATTTACGGAGCAGG",3,20.06,6,-4.76,2,1.5,1.34,0.06,"1 nonsynonymous","N92M",1
"lib1","SARS-CoV-2","AGATTTACTGGAGAGT",13,125.33,9.28,-1.48,0.13,1.57,1.11,0.01,"1 nonsynonymous","R25E",1
"lib1","SARS-CoV-2","AGATTTAGGCGCGTTG",4,81.1,10.79,0.03,0.08,2.91,1.04,0,"1 nonsynonymous","T55Q",1
"lib1","SARS-CoV-2","AGATTTATAAAATATC",6,1.83,NA,NA,NA,NA,NA,NA,"stop","N1I I88* E141D S147V F160I",5
"lib1","SARS-CoV-2","AGATTTATAACTCTCA",5,11.01,8.24,-2.52,0.48,1.5,1.01,0.03,"1 nonsynonymous","I88S",1
"lib1","SARS-CoV-2","AGATTTATAAGCAATT",4,11.78,6.05,-4.72,0.62,1.5,1.14,0.01,">1 nonsynonymous","V20L C49K Y93P T100R",4
"lib1","SARS-CoV-2","AGATTTATAAGCATAT",3,52.45,8.39,-2.38,0.14,2.76,1.07,0.01,">1 nonsynonymous","L60A N157R",2
"lib1","SARS-CoV-2","AGATTTATATTAGAAA",6,136.31,8.34,-2.42,0.12,2.58,1.09,0.01,">1 nonsynonymous","E141G G146V",2
"lib1","SARS-CoV-2","AGATTTATGACAAGAT",1,22.89,10.45,-0.32,0.06,2.95,1,0,">1 nonsynonymous","R16V A42Y S139D",3
"lib1","SARS-CoV-2","AGATTTATGCCATTAA",3,27.71,9.35,-1.41,0.16,1.95,1.12,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","AGATTTCAGATCCTAC",9,335.55,10.77,0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTTCCATTCTATT",1,32.85,9.23,-1.53,0.07,2.77,1.13,0,">1 nonsynonymous","Y159H G174W",2
"lib1","SARS-CoV-2","AGATTTCCCAAGAGAT",1,7.33,10.43,-0.34,0.1,2.95,1,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AGATTTCGAGACAACT",6,29.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V103R E135S",2
"lib1","SARS-CoV-2","AGATTTCGCGACTCGT",5,58.72,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","G9H A18K D97S K128A R179W",5
"lib1","SARS-CoV-2","AGATTTCTCTATCAAA",5,39.15,6,-4.76,2,3,1.11,0,">1 nonsynonymous","L60M R124G G174L",3
"lib1","SARS-CoV-2","AGATTTCTGCACTGCC",1,61.32,10.12,-0.64,0.06,2.82,1.04,0,">1 nonsynonymous","T140P G166A",2
"lib1","SARS-CoV-2","AGATTTGAAAATTATA",4,17.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106L K128C T140I",3
"lib1","SARS-CoV-2","AGATTTGACTCAAGGT",6,108.4,6.49,-4.27,0.48,1.5,1.27,0.02,">1 nonsynonymous","S19V S164M",2
"lib1","SARS-CoV-2","AGATTTGCCTTTTGAA",1,775.4,10.3,-0.47,0.03,2.86,1,0,">1 nonsynonymous","R27L P54V T100E",3
"lib1","SARS-CoV-2","AGATTTGGTACGGTTA",8,33,10.74,-0.03,0.05,2.9,1.05,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AGATTTGGTTAAAGAT",4,48.09,10.39,-0.37,0.06,2.94,1,0,">1 nonsynonymous","R27L P54C",2
"lib1","SARS-CoV-2","AGATTTGTTGATGCTA",6,45.25,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N24W N107S D112L",3
"lib1","SARS-CoV-2","AGATTTTAAAGTAAGG",5,78.3,10.74,-0.02,0.06,2.85,1.03,0,"1 nonsynonymous","G196Y",1
"lib1","SARS-CoV-2","AGATTTTAAAGTTCTC",3,60.99,10.58,-0.18,0.04,2.86,1.06,0,"1 nonsynonymous","A18T",1
"lib1","SARS-CoV-2","AGATTTTAAGAGCTAG",1,35.16,8.74,-2.02,0.14,2.52,1.11,0.01,">1 nonsynonymous","G83C N118K P149T",3
"lib1","SARS-CoV-2","AGATTTTAATTATCAA",2,39.51,8.06,-2.71,0.3,1.5,1.09,0.04,">1 nonsynonymous","L5Y L38M C61G N120I E141R G174R",6
"lib1","SARS-CoV-2","AGATTTTACGGCAAAT",4,0.74,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib1","SARS-CoV-2","AGATTTTAGTACGGTG",6,41.52,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","L60S P82K L95T C158M T201M",5
"lib1","SARS-CoV-2","AGATTTTATAATCGGA",8,2.5,NA,NA,NA,NA,NA,NA,"stop","P82R K87R D112S Y123* F185R",5
"lib1","SARS-CoV-2","AGATTTTATTACAATG",2,49.21,10.36,-0.4,0.06,2.79,1.02,0,">1 nonsynonymous","D90Y Q163I T201E",3
"lib1","SARS-CoV-2","AGATTTTCACATACCT",3,30.07,6.28,-4.48,0.74,1.5,1.13,0.03,">1 nonsynonymous","F12M E76G A89W N130T",4
"lib1","SARS-CoV-2","AGATTTTCTATATACA",3,59.96,10.52,-0.24,0.05,2.86,1.1,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","AGATTTTGCCCAAAAG",12,232.4,10.8,0.04,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGATTTTTGCCACGCA",6,75.63,9.96,-0.8,0.22,1.5,1.07,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","AGCAAAAAAACTAAAC",1,24.53,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L5I P7L I80M L95F W106S G146S",6
"lib1","SARS-CoV-2","AGCAAAAAGCACTTAG",5,21.17,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","D112G P161I",2
"lib1","SARS-CoV-2","AGCAAAAAGTGAAATA",1,6.84,6,-4.76,2,1.5,1.11,0.06,">1 nonsynonymous","V37A S45E E154F Y165K",4
"lib1","SARS-CoV-2","AGCAAAAAGTGTGTCA",1,7.26,10.2,-0.56,0.08,3,1,0,"1 nonsynonymous","Y121K",1
"lib1","SARS-CoV-2","AGCAAAAATCATCATA",2,23.73,7.35,-3.41,0.44,1.5,1.09,0.05,">1 nonsynonymous","N24I D112L Q163R",3
"lib1","SARS-CoV-2","AGCAAAAATGTAGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T G101Y L131F T148H K199T",5
"lib1","SARS-CoV-2","AGCAAAAATTCTCAAT",4,110.5,9.93,-0.83,0.07,1.99,1.05,0,">1 nonsynonymous","C49M T201Y",2
"lib1","SARS-CoV-2","AGCAAAAATTCTTATT",2,30.57,7.18,-3.59,0.27,1.5,1.08,0.02,">1 nonsynonymous","G9Q R27K A42V R136Y I142C F160S K199L",7
"lib1","SARS-CoV-2","AGCAAAACACAGAAAG",5,1.17,NA,NA,NA,NA,NA,NA,"stop","F44I K94D Y119*",3
"lib1","SARS-CoV-2","AGCAAAACAGACACAC",3,25.77,10.86,0.1,0.05,2.96,1.02,0,"1 nonsynonymous","P54A",1
"lib1","SARS-CoV-2","AGCAAAACCCTCAGGT",11,4.77,NA,NA,NA,NA,NA,NA,"stop","Y93H R127* F134T L162G",4
"lib1","SARS-CoV-2","AGCAAAACTATTAATA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","Y93V F99S Y119A C150*",4
"lib1","SARS-CoV-2","AGCAAAACTCAGTTAA",2,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K C102D",2
"lib1","SARS-CoV-2","AGCAAAAGCGACGCTG",3,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38F A67S V103Q N171K C195Y G196R",6
"lib1","SARS-CoV-2","AGCAAAAGGGCGGCAA",3,43.07,6.99,-3.77,0.37,1.5,1.16,0.03,">1 nonsynonymous","P7Y D90R Y159V",3
"lib1","SARS-CoV-2","AGCAAAAGTCAACCAT",1,35.82,10.26,-0.51,0.07,2.71,1.08,0,">1 nonsynonymous","R73K D98M",2
"lib1","SARS-CoV-2","AGCAAAAGTCTGACCA",2,53.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T46H A105L K114E R179M F185S",5
"lib1","SARS-CoV-2","AGCAAAAGTGAATTAA",2,107.25,9.36,-1.41,0.14,1.69,1.19,0.01,"1 nonsynonymous","Y66G",1
"lib1","SARS-CoV-2","AGCAAAAGTGCTAAAA",6,121.56,10.53,-0.23,0.07,2.78,1.04,0,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","AGCAAAAGTGGGTAAA",2,49.11,8.47,-2.3,0.4,1.5,1,0.06,">1 nonsynonymous","N58Q I72S T201M",3
"lib1","SARS-CoV-2","AGCAAAATAAATCACG",4,57.54,10.32,-0.44,0.05,2.83,1.02,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","AGCAAAATACCATAAC",2,33.29,9.26,-1.51,0.12,2.55,1.08,0.01,">1 nonsynonymous","R127K P169I",2
"lib1","SARS-CoV-2","AGCAAAATATCACCGA",4,23.22,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T46I K56G L95S V103Y F156S",5
"lib1","SARS-CoV-2","AGCAAAATATGGTAAG",7,0.59,NA,NA,NA,NA,NA,NA,"stop","K26* N120P K132S",3
"lib1","SARS-CoV-2","AGCAAAATCAAAGTGA",4,100.92,8.53,-2.23,0.09,2.49,1.15,0,">1 nonsynonymous","T15L Y91F Y119W F160H",4
"lib1","SARS-CoV-2","AGCAAAATCGTAACCA",4,27.38,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","K26Q C61T Y91D Y121D I138A",5
"lib1","SARS-CoV-2","AGCAAAATCGTAGGTT",1,1.36,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGCAAAATCGTGGTTC",5,0,NA,NA,NA,NA,NA,NA,"stop","C6* K114A I138E F160N",4
"lib1","SARS-CoV-2","AGCAAAATCTAAGAGT",2,12,6.17,-4.59,0.43,1.5,1.05,0,">1 nonsynonymous","L95Q G117P",2
"lib1","SARS-CoV-2","AGCAAAATGGCTGAGA",1,63.97,10.8,0.03,0.08,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAAAATGGTAATTT",1,12.68,8.34,-2.43,0.21,1.88,1.09,0.01,"1 nonsynonymous","Y121D",1
"lib1","SARS-CoV-2","AGCAAAATGTGGAATT",8,72.59,10.38,-0.38,0.08,2.77,1.01,0,">1 nonsynonymous","T140N V173L",2
"lib1","SARS-CoV-2","AGCAAAATTGTAGGTG",6,23.77,10.65,-0.11,0.13,2.81,1.11,0.01,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","AGCAAACAAAATTATG",1,6.45,8.72,-2.05,0.31,2.32,1.12,0.04,">1 nonsynonymous","S45G E76G",2
"lib1","SARS-CoV-2","AGCAAACAAGGTTGGT",4,72.56,7.82,-2.94,0.37,1.5,1,0.05,">1 nonsynonymous","A33K T46A S69E",3
"lib1","SARS-CoV-2","AGCAAACCAACATTTA",2,4.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGCAAACCATCCAAAT",2,32.81,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F12P S19A Y39L G83D",4
"lib1","SARS-CoV-2","AGCAAACCCCATCGGG",1,9.51,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V11A D59S I72P N107V",4
"lib1","SARS-CoV-2","AGCAAACCTGACCAAC",1,10.82,6,-4.76,2,3,1.09,0.01,"1 nonsynonymous","D68G",1
"lib1","SARS-CoV-2","AGCAAACCTTATACCT",11,7.22,NA,NA,NA,NA,NA,NA,"stop","P54E F134* Y143R",3
"lib1","SARS-CoV-2","AGCAAACGTCCACCCC",1,34.14,10.92,0.15,0.09,2.88,1.07,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","AGCAAACTGCAACAGC",7,50.82,10.76,0,0.07,2.93,1.03,0,">1 nonsynonymous","I2C D98N",2
"lib1","SARS-CoV-2","AGCAAAGACAAATACA",2,52.7,10.74,-0.02,0.09,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAAAGAGGAAGACA",1,0.81,NA,NA,NA,NA,NA,NA,"stop","G9S S19* L60* D137K",4
"lib1","SARS-CoV-2","AGCAAAGATTAAAATA",5,12.3,NA,NA,NA,NA,NA,NA,"stop","I2R N24R P149N C195*",4
"lib1","SARS-CoV-2","AGCAAAGTATCAGATA",6,14.28,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N110F R127L K132E A190F",4
"lib1","SARS-CoV-2","AGCAAATAAAAGCAAG",9,50.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10Q F99L P133K",3
"lib1","SARS-CoV-2","AGCAAATAAACGCGCA",3,5.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V65G G86I",2
"lib1","SARS-CoV-2","AGCAAATAAAGCATAC",3,69.49,10.51,-0.26,0.06,2.86,1.01,0,">1 nonsynonymous","N58S A89S",2
"lib1","SARS-CoV-2","AGCAAATAACGTCACT",8,140.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G116V Q163K P177W",3
"lib1","SARS-CoV-2","AGCAAATAAGTAAACT",1,1.14,NA,NA,NA,NA,NA,NA,"stop","D59* N157S",2
"lib1","SARS-CoV-2","AGCAAATACCGAGAAC",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L Y123W P149V",3
"lib1","SARS-CoV-2","AGCAAATAGTAATCCA",5,25.73,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V32G D90I L162P",3
"lib1","SARS-CoV-2","AGCAAATAGTCATGAT",3,33.69,9.37,-1.4,0.15,1.54,1.1,0.01,">1 nonsynonymous","V37Y G51F D97T",3
"lib1","SARS-CoV-2","AGCAAATATAAAGTGC",1,31.76,6.26,-4.5,0.29,1.5,1.11,0,">1 nonsynonymous","I80T D90P Q176F",3
"lib1","SARS-CoV-2","AGCAAATCACTGACGA",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S N171Y",2
"lib1","SARS-CoV-2","AGCAAATCAGACTCTT",2,23.29,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4E G101V G196C",3
"lib1","SARS-CoV-2","AGCAAATTATTGGACG",3,66.6,10.64,-0.12,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAAATTCAGTAACA",3,16.88,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10S R73L D112Y T201K",4
"lib1","SARS-CoV-2","AGCAAATTCATATTAT",4,86.76,10.62,-0.14,0.07,2.84,1.1,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","AGCAACAAAAACTCCC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A33* V77M F167* S184H C195L",5
"lib1","SARS-CoV-2","AGCAACAAACACAACG",4,2.16,NA,NA,NA,NA,NA,NA,"stop","S41* A89R W106E N157S",4
"lib1","SARS-CoV-2","AGCAACAACCCTACGG",6,80.5,10.71,-0.06,0.07,2.9,1.07,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","AGCAACAAGTTTGAGA",1,27.67,10.51,-0.26,0.06,2.96,1,0,">1 nonsynonymous","V37G K56Y",2
"lib1","SARS-CoV-2","AGCAACAATGACTACA",7,29.14,8.04,-2.72,0.3,2.29,1.41,0.04,">1 nonsynonymous","S29C G116K",2
"lib1","SARS-CoV-2","AGCAACACCTCCCCAT",5,24.29,10,-0.77,0.09,2.06,1.03,0,">1 nonsynonymous","K56L P96R",2
"lib1","SARS-CoV-2","AGCAACACTATGCTCA",3,37.34,6,-4.76,2,3,1.11,0,">1 nonsynonymous","C6V K26T N58S V65N P82Y W106G",6
"lib1","SARS-CoV-2","AGCAACAGATACCTTA",4,26.72,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","W23S N58A F126G E141N",4
"lib1","SARS-CoV-2","AGCAACAGTAAACGAC",5,50.41,9.23,-1.54,0.07,2.76,1.16,0,">1 nonsynonymous","L122V V153Y T170R",3
"lib1","SARS-CoV-2","AGCAACATACTGTACG",3,45.56,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","A14D Y39L D90V D97S G116T A145Y Y165S",7
"lib1","SARS-CoV-2","AGCAACATATTGGTTA",3,31.46,10.73,-0.03,0.06,2.94,1.02,0,">1 nonsynonymous","T63L K198S",2
"lib1","SARS-CoV-2","AGCAACATTCCTCTAA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","S19L C49Y C61* W106K",4
"lib1","SARS-CoV-2","AGCAACCAATTTCTCT",5,41,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","A14C G117C Q176T",3
"lib1","SARS-CoV-2","AGCAACCACCGAGTAA",1,1.07,NA,NA,NA,NA,NA,NA,"stop","Q144L P149I Q163M G172*",4
"lib1","SARS-CoV-2","AGCAACCCAATTGAAA",6,90.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V11F L38T V52H",3
"lib1","SARS-CoV-2","AGCAACCCACCCAGCT",3,92.24,10.74,-0.02,0.07,2.85,1.09,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","AGCAACCCTAAAGATC",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q G83R",2
"lib1","SARS-CoV-2","AGCAACCGCCAATATA",1,21.82,10.24,-0.52,0.13,2.84,1.02,0.01,">1 nonsynonymous","S139I T148K",2
"lib1","SARS-CoV-2","AGCAACCGTTGATTAT",27,277.84,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y35L D90T Y143R N151L",4
"lib1","SARS-CoV-2","AGCAACCTAGAAACAA",8,197.56,10.76,-0.01,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAACGACAAAATAC",2,12.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86C Y93A Y123D K132S",4
"lib1","SARS-CoV-2","AGCAACGACCAAGCGC",2,6.3,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","F12H S69M F99L I104S",4
"lib1","SARS-CoV-2","AGCAACGGATCTCAGC",6,15.98,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","N13C N157S Y165L",3
"lib1","SARS-CoV-2","AGCAACGTATTATCCA",2,15.14,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","D34A F99N L122M N157T",4
"lib1","SARS-CoV-2","AGCAACGTCTAGTTTC",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D Y123F",2
"lib1","SARS-CoV-2","AGCAACGTTACAAAGG",5,24.82,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","D59R Y93Q T100L N157T",4
"lib1","SARS-CoV-2","AGCAACGTTGTCAAGT",5,0.12,NA,NA,NA,NA,NA,NA,"stop","T15P Y39* D90L G155E T201K",5
"lib1","SARS-CoV-2","AGCAACGTTTAAGTTC",8,97.9,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","A14H L60M D90H N107T S129L D137K C158M V173S G196V",9
"lib1","SARS-CoV-2","AGCAACTAAGGCTCCC",7,27.84,10.2,-0.57,0.1,2.7,1.02,0.01,">1 nonsynonymous","T46Q Y91I N151L",3
"lib1","SARS-CoV-2","AGCAACTACCAAAGGA",2,51.64,10.18,-0.58,0.07,2.83,1,0,">1 nonsynonymous","C6F T15D",2
"lib1","SARS-CoV-2","AGCAACTCATAAATAA",2,46.6,10.07,-0.7,0.05,2.85,1.03,0,">1 nonsynonymous","S41M G174W",2
"lib1","SARS-CoV-2","AGCAACTCCTAAAACT",3,15.22,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A14S P82R F99P S108F",4
"lib1","SARS-CoV-2","AGCAACTCTCCACATA",1,77.99,10.83,0.07,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAACTGATGTGACA",1,26.9,10.89,0.12,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAACTGCATTTAAC",2,17.21,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G83M Y159S",2
"lib1","SARS-CoV-2","AGCAACTGCTGCAGGG",5,52.98,10.72,-0.05,0.11,2.84,1.1,0,">1 nonsynonymous","D59T L122M S200L",3
"lib1","SARS-CoV-2","AGCAAGAAAACCCAAG",19,255.9,8.05,-2.72,0.09,2.2,1.1,0,">1 nonsynonymous","G9D T15R C158E N171Y",4
"lib1","SARS-CoV-2","AGCAAGAAACAACTGA",2,33.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118L G155F",2
"lib1","SARS-CoV-2","AGCAAGAACTAATGCA",4,30.58,6.28,-4.49,0.45,1.5,1.11,0.01,">1 nonsynonymous","S43T E76S Y91T T201N",4
"lib1","SARS-CoV-2","AGCAAGAACTACCAAC",9,29.23,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","D59Y I88M D97C",3
"lib1","SARS-CoV-2","AGCAAGAAGCCATTCA",1,5.73,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","P96F I104K S113C G146K F156S T201E",6
"lib1","SARS-CoV-2","AGCAAGAATCGATCAA",3,22.51,10.43,-0.33,0.1,2.83,1,0.01,">1 nonsynonymous","R16L I28V",2
"lib1","SARS-CoV-2","AGCAAGACAACAGACA",6,28.86,10.13,-0.63,0.09,2.01,1.06,0,">1 nonsynonymous","L38P T201H",2
"lib1","SARS-CoV-2","AGCAAGACAGAGTTCG",1,17.44,8.47,-2.29,0.26,1.5,1.22,0.05,">1 nonsynonymous","C6M S29R Y178S",3
"lib1","SARS-CoV-2","AGCAAGACCGAAAGGG",3,24.22,10.74,-0.02,0.1,3,1.02,0,">1 nonsynonymous","K87Y V173M",2
"lib1","SARS-CoV-2","AGCAAGACGCAAAGTA",14,305.69,8.32,-2.45,0.1,2.6,1.09,0,">1 nonsynonymous","G83Q Y175S T201Y",3
"lib1","SARS-CoV-2","AGCAAGACTCGAGATG",1,15.72,10.66,-0.1,0.08,2.84,1.13,0,">1 nonsynonymous","P133A F160Y",2
"lib1","SARS-CoV-2","AGCAAGACTGAGTCAA",4,20.82,10.19,-0.58,0.09,2.65,1.12,0,">1 nonsynonymous","F47L S147Y S184G",3
"lib1","SARS-CoV-2","AGCAAGAGAAGAAAAA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","F8K D59R A105* L122I S129P",5
"lib1","SARS-CoV-2","AGCAAGAGAAGATATT",2,55.64,10.38,-0.39,0.06,2.78,1.06,0,">1 nonsynonymous","D98H I104L A145V",3
"lib1","SARS-CoV-2","AGCAAGAGCAAAGAGT",3,31.51,6.47,-4.29,0.6,1.5,1.26,0.04,">1 nonsynonymous","N30L V37Y G86T",3
"lib1","SARS-CoV-2","AGCAAGAGGATTTTTT",3,68.5,6,-4.76,1.56,1.5,1.19,0.02,">1 nonsynonymous","I2A E10V A22C R136N",4
"lib1","SARS-CoV-2","AGCAAGAGTCTCTAAG",6,20.07,10.85,0.09,0.06,2.88,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCAAGATAGGGGAAT",7,81.87,10.06,-0.7,0.08,2.68,1.04,0,">1 nonsynonymous","V37E K56Q G83M W106F",4
"lib1","SARS-CoV-2","AGCAAGATGTAACTAC",1,9.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89H N118S T170S",3
"lib1","SARS-CoV-2","AGCAAGCACCCAGTAA",2,8.18,10.63,-0.13,0.06,2.99,1.04,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","AGCAAGCCAGCCCTAG",2,14.44,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12R V77I T170L",3
"lib1","SARS-CoV-2","AGCAAGCCCTTAATAA",2,42.71,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P7A N107D K128T S129N Y143I V173E",6
"lib1","SARS-CoV-2","AGCAAGCCGTAATACA",6,130.15,10.21,-0.56,0.03,2.84,1.01,0,">1 nonsynonymous","A14S A105T",2
"lib1","SARS-CoV-2","AGCAAGCGCGAATGTC",3,13.86,9.3,-1.47,0.18,2.14,1.16,0.01,"1 nonsynonymous","L162R",1
"lib1","SARS-CoV-2","AGCAAGCTACAATATA",1,13.05,9.31,-1.46,0.42,1.5,1,0.06,">1 nonsynonymous","E10D R73H A81T S113F",4
"lib1","SARS-CoV-2","AGCAAGGATAAATACG",2,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L V77Q N118S C150T S200P",5
"lib1","SARS-CoV-2","AGCAAGGATACAGGAT",3,48.36,10.13,-0.64,0.05,2.71,1,0,">1 nonsynonymous","C31A T63L",2
"lib1","SARS-CoV-2","AGCAAGGTGCGACGGA",4,82.05,8.71,-2.06,0.08,2.69,1.07,0,">1 nonsynonymous","E10F Y119N I138M",3
"lib1","SARS-CoV-2","AGCAAGTAAGGCAAGC",1,21.95,8.1,-2.67,0.4,1.78,1.43,0.05,"1 nonsynonymous","G117H",1
"lib1","SARS-CoV-2","AGCAAGTAATCTTACA",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101I N120V R127Q G172R",4
"lib1","SARS-CoV-2","AGCAAGTAGGTTGAAA",2,31.35,6,-4.76,1.77,1.5,1.19,0.03,">1 nonsynonymous","Y50S T55V L183F",3
"lib1","SARS-CoV-2","AGCAAGTATATATCCT",2,63.36,10.87,0.11,0.06,2.9,1.06,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","AGCAAGTATGGAATAA",3,28.64,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","K87G G101T L122I K132Y",4
"lib1","SARS-CoV-2","AGCAAGTTAATACATG",4,18.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64F G101L",2
"lib1","SARS-CoV-2","AGCAAGTTATGAAATT",4,45.83,8.87,-1.89,0.15,2.18,1.14,0.01,">1 nonsynonymous","D34N V52R C61Q F156S",4
"lib1","SARS-CoV-2","AGCAAGTTCTTCCATA",5,0.49,NA,NA,NA,NA,NA,NA,"stop","L60P F70* D97K I104C Q144P",5
"lib1","SARS-CoV-2","AGCAAGTTTATACCAG",2,39.93,10.02,-0.75,0.23,1.72,1.21,0.02,">1 nonsynonymous","I2F A42T A89G P149Q",4
"lib1","SARS-CoV-2","AGCAATAAAAATTAAG",1,11.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82V N107L Y159H F167S",4
"lib1","SARS-CoV-2","AGCAATAAAACTTAAT",1,7.45,10.74,-0.02,0.07,2.97,1,0,">1 nonsynonymous","V37K T148E",2
"lib1","SARS-CoV-2","AGCAATAAAGTAATAA",4,2.63,NA,NA,NA,NA,NA,NA,"stop","V11* V65L",2
"lib1","SARS-CoV-2","AGCAATAACACCCCCG",4,49.3,9.75,-1.01,0.1,2.6,1.03,0,"1 nonsynonymous","N157D",1
"lib1","SARS-CoV-2","AGCAATAACTGCACCC",7,23.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L95N G116L",2
"lib1","SARS-CoV-2","AGCAATAAGCACGCGC",2,62.63,10.59,-0.17,0.06,2.84,1.09,0,">1 nonsynonymous","A18H F160C",2
"lib1","SARS-CoV-2","AGCAATAAGTACTCAA",1,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181R",1
"lib1","SARS-CoV-2","AGCAATAAGTCCAGCT",6,19.23,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50P Q84M K94L G117E",4
"lib1","SARS-CoV-2","AGCAATACCACCTATT",4,45.17,6,-4.76,1.76,1.5,1.13,0.01,">1 nonsynonymous","Y39V G86C Y93H P133M S139I F167P",6
"lib1","SARS-CoV-2","AGCAATACCCGCTCGT",2,0.33,NA,NA,NA,NA,NA,NA,"stop","S45A L60A Q84* L111G A145L",5
"lib1","SARS-CoV-2","AGCAATACGTAAGACT",1,11.55,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","N92L G117L T193N",3
"lib1","SARS-CoV-2","AGCAATACTAATTAAT",1,19.22,7.21,-3.56,0.38,1.5,1.05,0.05,">1 nonsynonymous","C6G F62N Q163P",3
"lib1","SARS-CoV-2","AGCAATACTCCCAATG",9,2.34,NA,NA,NA,NA,NA,NA,"stop","F47* K56N R73Y T100V I104H G117F F156S V182L",8
"lib1","SARS-CoV-2","AGCAATAGAAATAACT",3,0.5,NA,NA,NA,NA,NA,NA,"stop","S41* K87S K114H",3
"lib1","SARS-CoV-2","AGCAATAGAGAGGCAA",1,11.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23T G51E W106L",3
"lib1","SARS-CoV-2","AGCAATAGATCACCTA",2,1.11,NA,NA,NA,NA,NA,NA,"stop","V77T D97F F134N E141V Y175* S184I",6
"lib1","SARS-CoV-2","AGCAATAGTCAAATAT",11,120.64,6.09,-4.67,0.45,1.5,1.12,0.01,">1 nonsynonymous","K94T Y121M V173E K199L",4
"lib1","SARS-CoV-2","AGCAATATACGAGGGT",7,66.9,6,-4.76,1.03,1.5,1.17,0.01,">1 nonsynonymous","I2L A67H N151L P161R",4
"lib1","SARS-CoV-2","AGCAATATAGTTGCAT",10,135.9,10.56,-0.21,0.05,2.85,1.02,0,">1 nonsynonymous","T3P N64D D90R",3
"lib1","SARS-CoV-2","AGCAATATATGCACCG",10,143.83,6,-4.76,1.82,1.5,1.22,0.01,">1 nonsynonymous","S19R G74S",2
"lib1","SARS-CoV-2","AGCAATATGTGAAATG",5,102.1,8.45,-2.31,0.09,2.85,1.08,0,">1 nonsynonymous","S41V K87L G174I",3
"lib1","SARS-CoV-2","AGCAATATTATACCGT",10,47.2,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C31T P54A Y66D G83N T100N L122N",6
"lib1","SARS-CoV-2","AGCAATCAAAAATAAG",1,24.39,10.72,-0.05,0.04,2.92,1.01,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","AGCAATCAAAATTTAA",1,16.74,6,-4.76,1.05,3,1.07,0,">1 nonsynonymous","K87L N120L P161K V182T",4
"lib1","SARS-CoV-2","AGCAATCAATAGTTCA",3,51.21,9.31,-1.46,0.1,2.77,1.11,0,">1 nonsynonymous","D59V L125P T148S",3
"lib1","SARS-CoV-2","AGCAATCACAATACCC",5,36.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N A89S L95Q D97Y K128F",5
"lib1","SARS-CoV-2","AGCAATCACTTTTAAA",5,248.47,10.41,-0.36,0.03,2.93,1.03,0,">1 nonsynonymous","G155H P197H",2
"lib1","SARS-CoV-2","AGCAATCCATGCAACG",1,30.47,10.2,-0.57,0.17,2.61,1.09,0.02,">1 nonsynonymous","N58F Y91F",2
"lib1","SARS-CoV-2","AGCAATCCTAAGAAAG",2,20.04,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C6G F12C Y93K Y119V",4
"lib1","SARS-CoV-2","AGCAATCTACAACTCT",1,7.18,9.77,-1,0.18,3,1.1,0.01,">1 nonsynonymous","P96A T140Q",2
"lib1","SARS-CoV-2","AGCAATCTATCTTTTA",1,39.9,9.59,-1.17,0.07,2.57,1.05,0,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","AGCAATCTCTACCCAA",5,2.2,NA,NA,NA,NA,NA,NA,"stop","C61L G86V Y91* F99S N120M A190L",6
"lib1","SARS-CoV-2","AGCAATGAAAACTTAA",1,12.86,6,-4.76,2,3,1.26,0.06,">1 nonsynonymous","N130L I142E N151M T170L",4
"lib1","SARS-CoV-2","AGCAATGAACATACCA",4,1.8,NA,NA,NA,NA,NA,NA,"stop","V11* P82E G116R Y143A",4
"lib1","SARS-CoV-2","AGCAATGATCGTGAAT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","D98S G166* S200L",3
"lib1","SARS-CoV-2","AGCAATGCTACATAAC",3,88.98,10.69,-0.08,0.07,2.89,1.03,0,"1 nonsynonymous","D75A",1
"lib1","SARS-CoV-2","AGCAATGCTCCTAGCA",1,31.88,8.83,-1.93,0.18,2.01,1.11,0.01,">1 nonsynonymous","Y35R Y39S I142A G196S",4
"lib1","SARS-CoV-2","AGCAATGGCGGTGATC",9,83.01,9.71,-1.05,0.1,1.86,1.07,0,"1 nonsynonymous","V11G",1
"lib1","SARS-CoV-2","AGCAATGGGACCTTAA",4,33.13,6.81,-3.95,0.34,1.79,1.2,0.02,">1 nonsynonymous","D59S R136S Y175D",3
"lib1","SARS-CoV-2","AGCAATGTATTCCCCG",2,8.36,10.24,-0.52,0.14,2.89,1.02,0.01,"1 nonsynonymous","N40C",1
"lib1","SARS-CoV-2","AGCAATGTCCAAATTG",2,21.79,10.56,-0.2,0.04,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAATTATTATCCGT",4,54.99,10.66,-0.1,0.04,2.93,1,0,"1 nonsynonymous","F134A",1
"lib1","SARS-CoV-2","AGCAATTCATTACAGT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","A14V A22* Q84T F167S",4
"lib1","SARS-CoV-2","AGCAATTCGTCTTCTT",1,8.75,6,-4.76,2,3,1.05,0.02,">1 nonsynonymous","D68R L125I",2
"lib1","SARS-CoV-2","AGCAATTGAACGTCAA",2,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S D34P L95C N157D",4
"lib1","SARS-CoV-2","AGCAATTTAGCACTAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L K94Q",2
"lib1","SARS-CoV-2","AGCAATTTCACGAAAA",2,29.44,9.41,-1.35,0.1,1.89,1.12,0,">1 nonsynonymous","T46S D98H T100S Y121L S147V",5
"lib1","SARS-CoV-2","AGCAATTTCCGATTAA",1,13.7,10.87,0.11,0.06,2.94,1,0,"1 nonsynonymous","N1T",1
"lib1","SARS-CoV-2","AGCAATTTCCTTAAAA",1,14.26,8.24,-2.53,0.16,1.5,1.07,0.01,">1 nonsynonymous","D59N V103M T148R",3
"lib1","SARS-CoV-2","AGCAATTTGATACCAG",12,150.55,10.17,-0.59,0.06,2.69,1.01,0,">1 nonsynonymous","S45P S139D",2
"lib1","SARS-CoV-2","AGCACAAAAAACAATT",8,50.79,10.82,0.06,0.07,2.91,1.05,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","AGCACAAAAACAGAAC",5,42.07,8.2,-2.57,0.21,1.5,1.15,0.01,">1 nonsynonymous","G116C P161E",2
"lib1","SARS-CoV-2","AGCACAAAACAGTCTA",6,67.17,10.73,-0.04,0.07,2.85,1.07,0,"1 nonsynonymous","T140L",1
"lib1","SARS-CoV-2","AGCACAAAATTGCGAA",8,13.54,NA,NA,NA,NA,NA,NA,"stop","N13Y A42I E141* G174*",4
"lib1","SARS-CoV-2","AGCACAAACCAAATCC",2,18.7,6,-4.76,2,3,1.2,0.01,"1 nonsynonymous","G101E",1
"lib1","SARS-CoV-2","AGCACAAACCAGATAA",3,1.52,NA,NA,NA,NA,NA,NA,"stop","T46Q T55S A67I A81F G101R F126M E135S I142*",8
"lib1","SARS-CoV-2","AGCACAAATACAATCC",1,0.47,NA,NA,NA,NA,NA,NA,"stop","F8* A14W",2
"lib1","SARS-CoV-2","AGCACAAATATCCCAG",2,27.53,10.69,-0.07,0.1,2.96,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCACAAATATCGCGT",4,20.33,6.14,-4.63,0.56,2.89,1.24,0.01,"1 nonsynonymous","V20W",1
"lib1","SARS-CoV-2","AGCACAACACCCGAAC",7,64.24,8.13,-2.64,0.22,1.5,1.14,0.02,">1 nonsynonymous","G51Y G155H P191D",3
"lib1","SARS-CoV-2","AGCACAACCTGATAGA",1,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V52E G74Q Y123C",4
"lib1","SARS-CoV-2","AGCACAACTCCTATAC",13,139.83,10.56,-0.2,0.04,2.91,1.04,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","AGCACAAGAATCAAGT",2,23.04,9.2,-1.56,0.19,1.92,1.22,0.02,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","AGCACAATAACCCACT",1,0.81,NA,NA,NA,NA,NA,NA,"stop","A81* I142S G155F",3
"lib1","SARS-CoV-2","AGCACAATACGGCTTA",4,107.11,8.03,-2.73,0.12,1.8,1.1,0,">1 nonsynonymous","D90T S113N",2
"lib1","SARS-CoV-2","AGCACAATGAAAGGAG",4,120.16,10.49,-0.28,0.03,2.93,1.05,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","AGCACAATGATAATGA",6,33.42,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L60I A89L G101N",3
"lib1","SARS-CoV-2","AGCACAATGTACGAAA",7,128.26,10.58,-0.18,0.04,2.84,1.07,0,">1 nonsynonymous","T55V E141V",2
"lib1","SARS-CoV-2","AGCACAATGTGTACGA",2,47.3,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","Y35E G166M V173T T201E",4
"lib1","SARS-CoV-2","AGCACAATTCCCTTAA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib1","SARS-CoV-2","AGCACAATTCTTTCCC",3,0.45,NA,NA,NA,NA,NA,NA,"stop","G9Q A33R K94* G117S",4
"lib1","SARS-CoV-2","AGCACACAACCAAATT",5,47.65,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G86F L125E Y165S",3
"lib1","SARS-CoV-2","AGCACACAATACAGAC",3,29.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N92P T170A A190N",3
"lib1","SARS-CoV-2","AGCACACAATAGAACG",2,119.4,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F62A A81T N118S L122S Y175E R179L",6
"lib1","SARS-CoV-2","AGCACACACTACAGCA",2,34.11,10.26,-0.5,0.06,2.84,1.02,0,">1 nonsynonymous","R16Y T55C K132S",3
"lib1","SARS-CoV-2","AGCACACAGAGATTAG",3,65.59,10.6,-0.16,0.11,2.75,1.03,0,">1 nonsynonymous","N4P T63E E141N",3
"lib1","SARS-CoV-2","AGCACACCCTGATCAG",10,54.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59I D68L",2
"lib1","SARS-CoV-2","AGCACACTACATCCAA",5,159.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12R L38Q T55S G74P",4
"lib1","SARS-CoV-2","AGCACACTATCCCACA",10,6.29,NA,NA,NA,NA,NA,NA,"stop","S29I V37Y T100* Y121F R127Q F167L",6
"lib1","SARS-CoV-2","AGCACAGAAAATCAAT",2,71.51,9.4,-1.36,0.13,1.68,1.12,0.01,">1 nonsynonymous","S36T D112I I138S",3
"lib1","SARS-CoV-2","AGCACAGATATATCCT",1,9.48,6.77,-3.99,0.96,1.5,1.17,0.04,">1 nonsynonymous","G86T G166S",2
"lib1","SARS-CoV-2","AGCACAGATTAATATG",9,94.47,8.17,-2.59,0.18,1.5,1.14,0.01,">1 nonsynonymous","I28V F99L F156L",3
"lib1","SARS-CoV-2","AGCACAGGAACTTTAG",2,6.39,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7H D90N K94W W106C",4
"lib1","SARS-CoV-2","AGCACATAATTATCTC",1,33.09,10.71,-0.06,0.06,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCACATACGATCCAC",2,7.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I104Y Y121V F134R",3
"lib1","SARS-CoV-2","AGCACATATCCACGGA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","N30* I88A G174P",3
"lib1","SARS-CoV-2","AGCACATATGACACGG",14,473.23,10.21,-0.55,0.03,2.83,1.01,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","AGCACATGATTTTTAA",2,6.79,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","L5Q D90H F167V",3
"lib1","SARS-CoV-2","AGCACATTAAAAGTCC",2,1.43,NA,NA,NA,NA,NA,NA,"stop","V103* Y119C V180P",3
"lib1","SARS-CoV-2","AGCACATTAACTTTCT",2,31.39,7.7,-3.07,0.39,1.5,1.09,0.04,">1 nonsynonymous","Y91E I104Y S200Q",3
"lib1","SARS-CoV-2","AGCACATTCGTCCTAC",2,1.4,NA,NA,NA,NA,NA,NA,"stop","E10V A42*",2
"lib1","SARS-CoV-2","AGCACATTTGGTCTAC",2,3.24,NA,NA,NA,NA,NA,NA,"stop","D59* F156I",2
"lib1","SARS-CoV-2","AGCACCAAAAAGTGCA",9,127.94,9.94,-0.82,0.06,2.79,1.03,0,">1 nonsynonymous","D59E Y91M N120L",3
"lib1","SARS-CoV-2","AGCACCAAATAAAACA",1,28.15,9.96,-0.8,0.24,1.67,1.01,0.02,">1 nonsynonymous","K26Q V173T",2
"lib1","SARS-CoV-2","AGCACCACACACTATA",2,60.99,10.57,-0.19,0.06,2.9,1.07,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","AGCACCACATATGGGA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P D68M G86L W106E E154M Y165C",6
"lib1","SARS-CoV-2","AGCACCATCCTTAGCT",1,2.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S53F",1
"lib1","SARS-CoV-2","AGCACCATCTTAACCA",3,35.83,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C31S L95Y W106R F160G",4
"lib1","SARS-CoV-2","AGCACCATGAAAACGC",2,45.98,9.95,-0.81,0.11,2.31,1.08,0.01,">1 nonsynonymous","I2E T15R D97Q Y123M G174S",5
"lib1","SARS-CoV-2","AGCACCATTTGGACCG",3,23.18,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","T55F S129L P177D",3
"lib1","SARS-CoV-2","AGCACCCAAATTTGAG",1,20.64,10.74,-0.03,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCACCCCAAGTGCCC",3,5.58,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","T46N G83P",2
"lib1","SARS-CoV-2","AGCACCCCTAGAAACT",6,78.65,6.7,-4.06,0.31,1.5,1.1,0.01,">1 nonsynonymous","K56Q R127N G152P",3
"lib1","SARS-CoV-2","AGCACCCGCCAAGTTA",2,17.9,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D34S N92Y",2
"lib1","SARS-CoV-2","AGCACCCGTAAGTCTA",1,10.44,9.23,-1.54,0.17,2.38,1.26,0.02,">1 nonsynonymous","L5E D112L",2
"lib1","SARS-CoV-2","AGCACCCTAATTAGCT",6,38.01,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A14S Y39G D97S I104D N109G",5
"lib1","SARS-CoV-2","AGCACCCTCAGTAGAC",10,3.85,NA,NA,NA,NA,NA,NA,"stop","T3N I28S D97K L122* P149C",5
"lib1","SARS-CoV-2","AGCACCCTCCGCACAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A22Y C49Y D90N N151G Q168* T201R",6
"lib1","SARS-CoV-2","AGCACCCTTGCATTAG",2,4.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C195K",1
"lib1","SARS-CoV-2","AGCACCGATATAAATG",3,56.12,10.74,-0.03,0.06,2.9,1.07,0,">1 nonsynonymous","I2S R27Q",2
"lib1","SARS-CoV-2","AGCACCGATTTTGTCG",1,152.7,9.94,-0.83,0.07,2.57,1.01,0,">1 nonsynonymous","T15G N120F L187Q",3
"lib1","SARS-CoV-2","AGCACCGGATACAGAT",2,10.94,10.74,-0.03,0.04,2.98,1.02,0,"1 nonsynonymous","N58K",1
"lib1","SARS-CoV-2","AGCACCGGGCAGCGAA",9,30.72,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D98M L131R V173I",3
"lib1","SARS-CoV-2","AGCACCGGTATTTCAT",4,35.05,10.76,0,0.11,2.89,1.07,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","AGCACCTAATTAAGCA",3,14.15,6,-4.76,2,3,1.07,0,">1 nonsynonymous","K26S Y91I W106C N151H",4
"lib1","SARS-CoV-2","AGCACCTCAGGGGGCA",3,4.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","AGCACCTCTCACATTT",7,2.22,NA,NA,NA,NA,NA,NA,"stop","L122* F160I",2
"lib1","SARS-CoV-2","AGCACCTGGAGGCATG",6,97.92,10.83,0.07,0.06,2.89,1.05,0,">1 nonsynonymous","Y39T T148N",2
"lib1","SARS-CoV-2","AGCACCTTACTCTTGA",8,28.08,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y21G D90Y P149H",3
"lib1","SARS-CoV-2","AGCACCTTATTTACGC",6,81.29,10.62,-0.15,0.04,2.92,1.03,0,">1 nonsynonymous","D97L K128I",2
"lib1","SARS-CoV-2","AGCACGAAAAGTCATC",6,86.2,10.75,-0.02,0.05,2.92,1.04,0,"1 nonsynonymous","Y39N",1
"lib1","SARS-CoV-2","AGCACGAACTACCTAG",2,139.31,10.17,-0.6,0.04,2.93,1,0,">1 nonsynonymous","G9L K87M",2
"lib1","SARS-CoV-2","AGCACGAATCTTGCAT",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L V181L",2
"lib1","SARS-CoV-2","AGCACGACCAAAAAAA",3,3.72,NA,NA,NA,NA,NA,NA,"stop","N107R Q144* G152L L183V",4
"lib1","SARS-CoV-2","AGCACGACCCCGAAAC",7,120.97,10.26,-0.51,0.04,2.95,1.01,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","AGCACGACGCGAATAC",2,7.04,6,-4.76,2,3,1.1,0.02,">1 nonsynonymous","C6Q S41T G51D N120M",4
"lib1","SARS-CoV-2","AGCACGACTAAGTAAG",5,103.96,10.76,0,0.07,2.92,1.05,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","AGCACGAGAAAATCGA",13,86.45,8.29,-2.48,0.39,1.5,1,0.06,">1 nonsynonymous","A14R P82Q Y91H",3
"lib1","SARS-CoV-2","AGCACGAGAGATAGCG",2,20.2,10.5,-0.26,0.08,2.88,1.04,0,">1 nonsynonymous","L38F T85G",2
"lib1","SARS-CoV-2","AGCACGATAATCTGAT",1,17.31,10.82,0.05,0.11,2.95,1.04,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","AGCACGATTATAATAA",10,62.16,9.71,-1.05,0.08,2.05,1.08,0,">1 nonsynonymous","S45Q T55H R136C N151A",4
"lib1","SARS-CoV-2","AGCACGATTGATACAA",1,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N L57V L95K Y143Q",4
"lib1","SARS-CoV-2","AGCACGCCACGTCCAA",3,6.49,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","T46F D112Y P149I V180E",4
"lib1","SARS-CoV-2","AGCACGCGTAGATGAT",3,34.95,9.4,-1.37,0.09,2.65,1.08,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","AGCACGGAAAAAATCT",6,35.55,10.69,-0.07,0.06,2.93,1.03,0,"1 nonsynonymous","A42M",1
"lib1","SARS-CoV-2","AGCACGGCTACATGAT",1,11.5,8.34,-2.42,0.34,2.17,1.21,0.04,">1 nonsynonymous","W106Q Y119T",2
"lib1","SARS-CoV-2","AGCACGGGCATTACAC",1,22.16,10.59,-0.18,0.05,2.94,1.07,0,"1 nonsynonymous","N24H",1
"lib1","SARS-CoV-2","AGCACGGGCTTTGCAC",1,0.62,NA,NA,NA,NA,NA,NA,"stop","K114I E141*",2
"lib1","SARS-CoV-2","AGCACGTAAGACCGCG",9,3.21,NA,NA,NA,NA,NA,NA,"stop","Y35M F44V A67I G74A F134* F156K",6
"lib1","SARS-CoV-2","AGCACGTACTAAAGTT",2,14.14,10.11,-0.65,0.12,2.69,1.33,0.01,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","AGCACGTCATGCTATC",4,153.31,10.76,0,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCACGTGATGACATT",4,52.01,10.3,-0.47,0.05,2.88,1.03,0,">1 nonsynonymous","T100D L187K",2
"lib1","SARS-CoV-2","AGCACTAAACTTATCT",3,52.02,10.68,-0.08,0.05,2.96,1.01,0,">1 nonsynonymous","A42V L60R",2
"lib1","SARS-CoV-2","AGCACTAAGTTTGATA",1,20.4,10.73,-0.03,0.1,2.79,1.1,0,">1 nonsynonymous","T55S E141S",2
"lib1","SARS-CoV-2","AGCACTACCATCCACA",4,57.57,10.67,-0.1,0.04,2.96,1.01,0,">1 nonsynonymous","L122A S139C",2
"lib1","SARS-CoV-2","AGCACTATATAGTTTG",1,18.85,10.72,-0.05,0.06,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCACTATCACGCTAA",3,31.29,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","C6F S45G Y91D L125P",4
"lib1","SARS-CoV-2","AGCACTCAACCCCAGT",8,169.49,8.67,-2.09,0.08,2.7,1.13,0,">1 nonsynonymous","V32R S41V N157S",3
"lib1","SARS-CoV-2","AGCACTCACTCTTAGG",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L F62W A81S A89V L122M E186D",6
"lib1","SARS-CoV-2","AGCACTCCACGAGTAA",3,68.94,10.66,-0.1,0.05,2.89,1,0,">1 nonsynonymous","A18V Q163M",2
"lib1","SARS-CoV-2","AGCACTCCAGTTCTGG",6,2.02,NA,NA,NA,NA,NA,NA,"stop","D98* T148I",2
"lib1","SARS-CoV-2","AGCACTCCCCAGTAAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C V52S G86N F99R S139D",5
"lib1","SARS-CoV-2","AGCACTGAGGACCGTG",3,6.57,6.81,-3.95,0.5,1.5,1,0.07,">1 nonsynonymous","L5N V103G G146W",3
"lib1","SARS-CoV-2","AGCACTGCAATCTGAA",3,35.52,6.82,-3.95,0.38,1.5,1.15,0.03,">1 nonsynonymous","V32M L60S Q79R G117R T148Q L187H",6
"lib1","SARS-CoV-2","AGCACTGCACACACAA",6,42.02,9.08,-1.69,0.1,2.02,1.17,0,">1 nonsynonymous","P54S N64P I142K",3
"lib1","SARS-CoV-2","AGCACTGCCGTCCTCA",8,55.36,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V71E G86S L95N",3
"lib1","SARS-CoV-2","AGCACTGGGCCGTTGA",6,10.17,6.01,-4.76,1.53,3,1.05,0,">1 nonsynonymous","F62W L95G P197S",3
"lib1","SARS-CoV-2","AGCACTGTCCATAAAA",3,33.17,10.04,-0.72,0.29,1.65,1.08,0.03,">1 nonsynonymous","N1G P82L",2
"lib1","SARS-CoV-2","AGCACTTAAAGCAAGG",7,67.32,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N13L K56V R78L Y119G Q176K",5
"lib1","SARS-CoV-2","AGCACTTACTGGCTAA",2,90.9,6,-4.76,1.91,1.5,1.19,0.01,">1 nonsynonymous","G9N Y50P Y66Q K94N G155P Q168H Q176I",7
"lib1","SARS-CoV-2","AGCACTTCTGCTCCCT",2,1.42,NA,NA,NA,NA,NA,NA,"stop","R27M V153*",2
"lib1","SARS-CoV-2","AGCACTTGTCGTAGAT",1,11.1,6.16,-4.61,0.53,3,1.2,0.01,">1 nonsynonymous","S41D L95K Y119I F160I",4
"lib1","SARS-CoV-2","AGCACTTTAATTAAAT",11,28.46,6.53,-4.24,0.61,1.5,1.36,0.03,">1 nonsynonymous","P96C I104T",2
"lib1","SARS-CoV-2","AGCACTTTGAAAAATA",12,5.09,NA,NA,NA,NA,NA,NA,"stop","E10I F47* V77I",3
"lib1","SARS-CoV-2","AGCAGAAACAAATGAG",1,24.32,10.72,-0.05,0.09,2.82,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAGAACAATAAGTA",4,42.03,10.6,-0.16,0.03,2.93,1.01,0,">1 nonsynonymous","A42N I142M",2
"lib1","SARS-CoV-2","AGCAGAACATGGTAAA",3,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T D59R R124Y T201L",4
"lib1","SARS-CoV-2","AGCAGAACCGTCCATA",4,63.21,10.76,0,0.09,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAGAACTTCCTATA",2,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V L122P P161F",3
"lib1","SARS-CoV-2","AGCAGAATAAAGTAAT",2,71.38,6,-4.76,2,1.5,1.11,0,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","AGCAGAATGATTAGCC",3,20.11,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","F12E I88N",2
"lib1","SARS-CoV-2","AGCAGAATTATAAATT",3,7.88,10.29,-0.47,0.12,2.77,1,0.01,"1 nonsynonymous","P133V",1
"lib1","SARS-CoV-2","AGCAGAATTGTTTTAT",3,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N13D Q144C",3
"lib1","SARS-CoV-2","AGCAGACATCAATTCA",6,0.78,NA,NA,NA,NA,NA,NA,"stop","K56R S113T K199*",3
"lib1","SARS-CoV-2","AGCAGACATCGGTGCC",3,1.8,NA,NA,NA,NA,NA,NA,"stop","C49* Y93L N110G P149Y",4
"lib1","SARS-CoV-2","AGCAGACCAAATCTCC",1,35.86,10.44,-0.32,0.08,2.93,1.02,0,">1 nonsynonymous","T3F F126L T140L P197L",4
"lib1","SARS-CoV-2","AGCAGACCATTGCATT",4,73.33,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","AGCAGACGAATCAGAT",1,17.08,10.63,-0.13,0.09,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCAGACGACTCTGTT",10,184.07,10.65,-0.12,0.05,2.87,1.07,0,"1 nonsynonymous","V32S",1
"lib1","SARS-CoV-2","AGCAGACTTGTAATCA",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66H G146T",2
"lib1","SARS-CoV-2","AGCAGAGCAACCCATT",3,22.38,6,-4.76,1.99,1.5,1.18,0.01,">1 nonsynonymous","R127L Q168C",2
"lib1","SARS-CoV-2","AGCAGAGCACCCCATA",4,31.77,10.66,-0.1,0.06,2.93,1.04,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","AGCAGAGCCACAACCC",4,19.38,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37I P96T F134T E154S T170F L187C K199T",7
"lib1","SARS-CoV-2","AGCAGAGCCACAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9H V37* N64L I88V",4
"lib1","SARS-CoV-2","AGCAGAGCTGGACGGT",4,78.96,10.37,-0.4,0.05,2.78,1.07,0,">1 nonsynonymous","T3L P133S",2
"lib1","SARS-CoV-2","AGCAGAGTCACCCGAA",4,96.24,10.69,-0.07,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCAGAGTTTGCTTAC",4,68.89,7.66,-3.11,0.25,1.54,1.13,0.02,">1 nonsynonymous","L5I L38H G166H",3
"lib1","SARS-CoV-2","AGCAGATAACACAATT",8,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R N107R N120I",3
"lib1","SARS-CoV-2","AGCAGATAAGTTTTAA",3,39.61,8.18,-2.59,0.21,1.84,1.12,0.02,">1 nonsynonymous","V37I F99L L122F S129Y P169Q",5
"lib1","SARS-CoV-2","AGCAGATATGTAAATC",8,0.49,NA,NA,NA,NA,NA,NA,"stop","V37S L60* G86S R136F K198D",5
"lib1","SARS-CoV-2","AGCAGATCGCGAAGAG",2,20.69,6,-4.76,2,3,1.17,0,">1 nonsynonymous","I72H K128R Q168T",3
"lib1","SARS-CoV-2","AGCAGATCTAGTTAAT",2,64.45,10.25,-0.52,0.06,2.75,1.08,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","AGCAGATGAACTAACA",8,47.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N4I Y50V D112M R127L",4
"lib1","SARS-CoV-2","AGCAGATTAATTGTAC",10,165.37,10.44,-0.33,0.04,2.85,1.03,0,"1 nonsynonymous","R136C",1
"lib1","SARS-CoV-2","AGCAGATTACACCGAA",3,24.6,6.15,-4.61,1.3,1.5,1.23,0.03,">1 nonsynonymous","Y93D S113M",2
"lib1","SARS-CoV-2","AGCAGATTCGTGAAAG",7,17.06,7.69,-3.08,0.4,1.5,1.08,0.08,">1 nonsynonymous","G9C S45G G146L",3
"lib1","SARS-CoV-2","AGCAGCAAAATATTTC",6,46.85,6.31,-4.46,0.57,1.5,1.13,0.02,">1 nonsynonymous","T3S F99K",2
"lib1","SARS-CoV-2","AGCAGCAAAGGCAATT",9,52.37,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K48L N107V Y143R",3
"lib1","SARS-CoV-2","AGCAGCAGAGGCCCAT",4,27.21,10.34,-0.42,0.1,2.78,1,0,">1 nonsynonymous","L57K K87Y",2
"lib1","SARS-CoV-2","AGCAGCATAGAGCTCA",2,0.63,NA,NA,NA,NA,NA,NA,"stop","D34C V77* G146A K198V",4
"lib1","SARS-CoV-2","AGCAGCCACTGTGAAG",6,129.82,9.94,-0.82,0.06,2.77,1.03,0,">1 nonsynonymous","N4E S147C F160I",3
"lib1","SARS-CoV-2","AGCAGCCCACTAATAT",2,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I L162H",2
"lib1","SARS-CoV-2","AGCAGCCGGGATTCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","D90G W106M Y119*",3
"lib1","SARS-CoV-2","AGCAGCCTCATAACGC",13,81.32,8.43,-2.34,0.22,1.63,1.13,0.02,">1 nonsynonymous","F99Y G146R H189P",3
"lib1","SARS-CoV-2","AGCAGCGAATTCAACT",6,226.94,10.6,-0.17,0.04,2.91,1.05,0,">1 nonsynonymous","V37K D98R P149S T201Q",4
"lib1","SARS-CoV-2","AGCAGCGGGCATCCTA",3,167.98,10.59,-0.18,0.03,2.87,1.04,0,">1 nonsynonymous","T3F A42L",2
"lib1","SARS-CoV-2","AGCAGCGTATCAAAAA",2,24.69,6,-4.76,1.28,1.5,1.13,0.03,">1 nonsynonymous","Y91M V103T D137V",3
"lib1","SARS-CoV-2","AGCAGCGTTAAACGGT",2,27.37,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56C Y93E S184A",3
"lib1","SARS-CoV-2","AGCAGCTATTATTATT",1,17.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y A67F S108F G146S",4
"lib1","SARS-CoV-2","AGCAGCTCAAGCGACT",1,90.36,10.45,-0.32,0.07,2.85,1.04,0,">1 nonsynonymous","T85W T140R",2
"lib1","SARS-CoV-2","AGCAGCTGACGATAAG",4,48.35,10.66,-0.11,0.03,2.97,1.01,0,">1 nonsynonymous","G9T S36V",2
"lib1","SARS-CoV-2","AGCAGCTTAACGTAAG",5,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L T85M E141V",3
"lib1","SARS-CoV-2","AGCAGGACACTTTCCA",1,62.08,8.85,-1.92,0.09,2.74,1.07,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","AGCAGGACATCTAGGC",1,14.35,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63V Y93W R179G",3
"lib1","SARS-CoV-2","AGCAGGACCCGAGGAA",1,47.65,9.25,-1.52,0.09,1.71,1.07,0,">1 nonsynonymous","I28V S45V P149I",3
"lib1","SARS-CoV-2","AGCAGGACCGTAAATC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T15Y N120*",2
"lib1","SARS-CoV-2","AGCAGGACTAGCCTTG",4,0.36,NA,NA,NA,NA,NA,NA,"stop","S43P T63* Y93H F99L N107V F126C L162K",7
"lib1","SARS-CoV-2","AGCAGGAGTACCCAAA",1,2.53,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGCAGGCCGACAGAAT",3,18.85,9.81,-0.96,0.17,2.48,1.07,0.03,">1 nonsynonymous","N58R A81T",2
"lib1","SARS-CoV-2","AGCAGGCGAGCGAATC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","G74* N118L N130F T148S R179E",5
"lib1","SARS-CoV-2","AGCAGGCTCCCATGTT",3,6.17,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","Y50N A89L Y143F",3
"lib1","SARS-CoV-2","AGCAGGGGACCAGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* D90G G152L",3
"lib1","SARS-CoV-2","AGCAGGTGCTTCATAG",1,7.56,10,-0.76,0.11,3,1.02,0,">1 nonsynonymous","F44I E154D",2
"lib1","SARS-CoV-2","AGCAGGTTGCACCAGG",1,19.04,10.85,0.09,0.08,2.83,1.05,0,">1 nonsynonymous","T3V T201K",2
"lib1","SARS-CoV-2","AGCAGTAATCTGGCGG",6,120.47,10.48,-0.28,0.04,2.94,1,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","AGCAGTACAGGAAACT",2,26.36,8.27,-2.49,0.25,1.85,1.07,0.03,">1 nonsynonymous","F126T I138V F185P",3
"lib1","SARS-CoV-2","AGCAGTACCTAGGATG",2,33.18,10.75,-0.01,0.1,2.95,1,0,">1 nonsynonymous","I2H N58S",2
"lib1","SARS-CoV-2","AGCAGTACTCGATTTT",11,163.32,9.2,-1.56,0.18,1.5,1.17,0.01,">1 nonsynonymous","R25A S129T",2
"lib1","SARS-CoV-2","AGCAGTAGAAATCGTA",2,59.63,10.83,0.07,0.07,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCAGTATGTAGCTGG",1,5.69,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G9M T15N V20K T55H C61A Y91G",6
"lib1","SARS-CoV-2","AGCAGTCAATGTTAAA",3,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59P I80N D90Q",3
"lib1","SARS-CoV-2","AGCAGTCCATCACTAA",7,60.86,10.41,-0.36,0.05,2.91,1.02,0,">1 nonsynonymous","N58T G83C",2
"lib1","SARS-CoV-2","AGCAGTCTTGAGTCAG",4,163,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","L38R G86D N118P N171L",4
"lib1","SARS-CoV-2","AGCAGTGAGATCCGCA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","C61Q I88L L125P K199*",4
"lib1","SARS-CoV-2","AGCAGTGCAAAAGCTT",1,19.78,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F8P F99C F156T",3
"lib1","SARS-CoV-2","AGCAGTGCAAACCCAC",4,75.5,6,-4.76,1.02,1.5,1.18,0.01,">1 nonsynonymous","N30S F167T",2
"lib1","SARS-CoV-2","AGCAGTTACCTAGAAA",2,8.37,10.06,-0.7,0.1,2.85,1.04,0.01,">1 nonsynonymous","G146A G152Y",2
"lib1","SARS-CoV-2","AGCAGTTCAGACACAG",1,17.45,11.03,0.26,0.06,2.97,1,0,">1 nonsynonymous","S43I T201R",2
"lib1","SARS-CoV-2","AGCAGTTGAGCTTGTT",3,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143N V180A",2
"lib1","SARS-CoV-2","AGCAGTTGCGCGACAG",2,0.87,NA,NA,NA,NA,NA,NA,"stop","S43L P54E N110W Y178* C195D",5
"lib1","SARS-CoV-2","AGCAGTTTATTCGATC",7,337.8,10.3,-0.47,0.03,2.88,1.02,0,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","AGCAGTTTGACAAATA",4,298.27,10.77,0.01,0.06,2.91,1.05,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","AGCAGTTTGAGATGGC",2,15.26,8.13,-2.63,0.32,1.55,1.16,0.02,">1 nonsynonymous","S43V D68E E141D",3
"lib1","SARS-CoV-2","AGCATAAAAGATACAA",3,28.31,10.73,-0.03,0.08,2.84,1.03,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","AGCATAAACTCCAATA",3,2.43,NA,NA,NA,NA,NA,NA,"stop","V37* I104V G174L",3
"lib1","SARS-CoV-2","AGCATAAAGCGATCAA",3,34.93,7.86,-2.9,0.19,1.5,1.05,0.02,">1 nonsynonymous","F99V T170R",2
"lib1","SARS-CoV-2","AGCATAAAGCGCCAAG",6,72.26,10.8,0.03,0.05,2.9,1.06,0,">1 nonsynonymous","V37Q L187V",2
"lib1","SARS-CoV-2","AGCATAAAGTCAAGCA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","N30M A33E S45* G116E P177K",5
"lib1","SARS-CoV-2","AGCATAACAAACATTT",11,100.1,10.3,-0.46,0.05,2.79,1.06,0,">1 nonsynonymous","N1D T85S D98W",3
"lib1","SARS-CoV-2","AGCATAACAGTCGCAT",1,38.1,10.78,0.01,0.06,2.85,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCATAACCTATACGG",1,29.25,9.77,-1,0.1,2.45,1.03,0.01,">1 nonsynonymous","L5I R136Y S147M S200F",4
"lib1","SARS-CoV-2","AGCATAACGCCTCTAT",2,21.54,6.12,-4.64,0.9,1.5,1.2,0.03,">1 nonsynonymous","C49A I104L",2
"lib1","SARS-CoV-2","AGCATAACTAATATGG",6,1.07,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","AGCATAACTGCCACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F S41L G83N L125V F160M",5
"lib1","SARS-CoV-2","AGCATAAGGGTAGCAA",7,36.11,10.8,0.03,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCATAATAATGAATG",1,62.57,10.8,0.03,0.03,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCATAATAATTGTTA",2,23.23,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S19V A42G D75L G101T P169M G174W",6
"lib1","SARS-CoV-2","AGCATAATAGAAGAGA",1,84.24,9.54,-1.22,0.22,1.64,1.14,0.02,">1 nonsynonymous","V37N F44T Q84K N120S E141M",5
"lib1","SARS-CoV-2","AGCATAATAGTGAAGT",4,124.04,10.27,-0.49,0.05,2.91,1,0,">1 nonsynonymous","G9I A14K",2
"lib1","SARS-CoV-2","AGCATAATATCAGTAA",6,102.42,10.62,-0.15,0.04,2.89,1.05,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","AGCATAATATTGCTGT",4,39.61,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","T46Q D68M K87S G174R",4
"lib1","SARS-CoV-2","AGCATAATCACGATAA",5,140.05,10.25,-0.51,0.06,2.68,1,0,"1 nonsynonymous","R25T",1
"lib1","SARS-CoV-2","AGCATAATCTTTATAG",3,24.63,10.75,-0.02,0.11,2.94,1.05,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","AGCATAATTCATTTAA",6,57.35,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","C6S A105S S113L F134I P177L P191C",6
"lib1","SARS-CoV-2","AGCATACAACCACTTA",7,1.62,NA,NA,NA,NA,NA,NA,"stop","R27* S41L D90R E141S",4
"lib1","SARS-CoV-2","AGCATACAATCTTACT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","N1I K94* N107Y K128H I138T Y178F",6
"lib1","SARS-CoV-2","AGCATACATCCTTTTT",1,5.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7L S19K K26G Y91F",4
"lib1","SARS-CoV-2","AGCATACCCAAAACAT",2,1.3,NA,NA,NA,NA,NA,NA,"stop","C61R N118*",2
"lib1","SARS-CoV-2","AGCATACCGCCAATAC",3,61.81,8.66,-2.1,0.15,1.5,1.13,0.01,">1 nonsynonymous","N64C A89G E141V",3
"lib1","SARS-CoV-2","AGCATACGAAGATACA",2,75.73,10.14,-0.62,0.06,2.95,1,0,">1 nonsynonymous","C61T T140L F156R",3
"lib1","SARS-CoV-2","AGCATACGTAGAACTT",6,157,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D112Y Y143K T148K",3
"lib1","SARS-CoV-2","AGCATACTGTATATTA",8,168.19,9.75,-1.01,0.1,1.96,1.1,0,">1 nonsynonymous","V11N K199Y",2
"lib1","SARS-CoV-2","AGCATACTTAAGCGTT",2,17.73,9.9,-0.86,0.03,2.96,1,0,">1 nonsynonymous","D90L G174L",2
"lib1","SARS-CoV-2","AGCATAGAAACCGTAC",4,56.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94I P177Q",2
"lib1","SARS-CoV-2","AGCATAGACCCAGTTT",2,9.54,11.17,0.4,0.08,3,1,0,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","AGCATAGCATGTAATC",4,93.03,10.77,0.01,0.09,2.88,1.1,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","AGCATAGCGGACTGGA",3,102.07,10.25,-0.52,0.04,2.8,1.05,0,">1 nonsynonymous","S184E C195S",2
"lib1","SARS-CoV-2","AGCATAGCTCCAATTG",8,0.4,NA,NA,NA,NA,NA,NA,"stop","A33* S45R N157K",3
"lib1","SARS-CoV-2","AGCATAGGATGCCATA",3,0.11,NA,NA,NA,NA,NA,NA,"stop","K56R D97F D137S L162* A190T K198V",6
"lib1","SARS-CoV-2","AGCATAGTCATCAACC",2,40.25,10.73,-0.04,0.06,2.89,1.05,0,">1 nonsynonymous","N64S N110I",2
"lib1","SARS-CoV-2","AGCATATACAACGGCT",2,25.06,9.93,-0.84,0.11,2.03,1.13,0.01,">1 nonsynonymous","L38R C61R",2
"lib1","SARS-CoV-2","AGCATATAGCCACCTG",6,60.08,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I88T N120M G146V",3
"lib1","SARS-CoV-2","AGCATATAGTCCCTTA",2,21.43,10.64,-0.13,0.08,2.83,1,0,">1 nonsynonymous","T3L T15K N110F",3
"lib1","SARS-CoV-2","AGCATATCAGGTCATA",7,162.19,9.59,-1.18,0.06,2.86,1.07,0,">1 nonsynonymous","N118E G174R",2
"lib1","SARS-CoV-2","AGCATATCATGCAGTA",4,25.58,9.97,-0.79,0.04,2.02,1,0,">1 nonsynonymous","V65W G152R",2
"lib1","SARS-CoV-2","AGCATATCCGAACTAA",3,28.33,10.74,-0.03,0.08,2.89,1.04,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","AGCATATGGATCAGCA",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24I S53Y N120P V173K",4
"lib1","SARS-CoV-2","AGCATATGTCTGATAT",2,25.77,9.35,-1.42,0.19,1.61,1.17,0.02,">1 nonsynonymous","L60P P96D",2
"lib1","SARS-CoV-2","AGCATATGTTAACCCG",1,13.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117V N157F G166T",3
"lib1","SARS-CoV-2","AGCATCAAAGGTTCGG",1,44.37,10.8,0.03,0.07,2.95,1.04,0,">1 nonsynonymous","L5P Q144D",2
"lib1","SARS-CoV-2","AGCATCAAAGTAACAT",4,56.16,10.55,-0.21,0.05,2.94,1,0,">1 nonsynonymous","E141M S164C",2
"lib1","SARS-CoV-2","AGCATCAAGGAATAGT",8,125.04,10.56,-0.2,0.04,2.93,1.01,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","AGCATCAATGTGAGTA",7,92.58,8.47,-2.29,0.16,1.5,1.12,0.01,">1 nonsynonymous","I2P D90I N120T",3
"lib1","SARS-CoV-2","AGCATCACAAATCAAA",2,114.64,10.32,-0.44,0.04,2.8,1,0,">1 nonsynonymous","T15L D90H P197L",3
"lib1","SARS-CoV-2","AGCATCACTGAGATAT",2,12.79,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35S L60S S129T Y159P Q168R",5
"lib1","SARS-CoV-2","AGCATCATATGACAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","L122* K132R K198*",3
"lib1","SARS-CoV-2","AGCATCATCAATAGTA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","A33* P54C",2
"lib1","SARS-CoV-2","AGCATCATCGACAAGT",5,62.13,10.07,-0.7,0.1,2.65,1,0,">1 nonsynonymous","G9F R16E P54H N64Q D97C",5
"lib1","SARS-CoV-2","AGCATCCAAGTTTGGA",8,3.24,NA,NA,NA,NA,NA,NA,"stop","N4* G9S V32S A81* G101F K128T",6
"lib1","SARS-CoV-2","AGCATCCATAGCCAAG",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P K94Y Y121E",3
"lib1","SARS-CoV-2","AGCATCCATCACCGGA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","I2K S41V I138N T148N F160A K198*",6
"lib1","SARS-CoV-2","AGCATCCCGCAGATAA",7,3.89,NA,NA,NA,NA,NA,NA,"stop","G9* D90Y",2
"lib1","SARS-CoV-2","AGCATCCGGGTCAATG",4,20.61,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","AGCATCCTTAACATAG",1,13.61,6.42,-4.34,0.66,1.5,1.12,0.03,">1 nonsynonymous","L5F C49E",2
"lib1","SARS-CoV-2","AGCATCCTTGTGCAAT",11,130.66,10.75,-0.02,0.04,2.93,1.02,0,">1 nonsynonymous","G83M V115I",2
"lib1","SARS-CoV-2","AGCATCGCGCAATGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42I K128*",2
"lib1","SARS-CoV-2","AGCATCGGTTAAAGAT",11,192.69,10.57,-0.19,0.04,2.91,1.01,0,">1 nonsynonymous","A42S C61S",2
"lib1","SARS-CoV-2","AGCATCTATCACTAAT",10,69.96,8.78,-1.98,0.1,1.89,1.14,0,">1 nonsynonymous","C61N K87D D98H W106M",4
"lib1","SARS-CoV-2","AGCATCTATGGGGGAC",1,0.27,NA,NA,NA,NA,NA,NA,"stop","F62P T85* K128S G152F C158L",5
"lib1","SARS-CoV-2","AGCATCTTAACACTTG",5,44.27,9.16,-1.6,0.15,2.66,1.13,0.01,">1 nonsynonymous","S36R I142E",2
"lib1","SARS-CoV-2","AGCATCTTCAGCATGT",1,48.9,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y50M N92L",2
"lib1","SARS-CoV-2","AGCATCTTCTATAGAA",6,51.63,10.14,-0.62,0.04,2.72,1.06,0,">1 nonsynonymous","P96D N171S",2
"lib1","SARS-CoV-2","AGCATGAACGGAGAAT",11,599.41,10.27,-0.5,0.03,2.78,1.07,0,"1 nonsynonymous","P133Q",1
"lib1","SARS-CoV-2","AGCATGAATATAAATA",2,25.13,10.57,-0.2,0.07,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCATGACAAGGTAGC",3,15.77,7.9,-2.86,0.38,1.5,1.06,0.05,">1 nonsynonymous","D68T Q176M",2
"lib1","SARS-CoV-2","AGCATGACAGCCCAGT",1,53.37,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y35P Q84F I88L V115N F156Y Q176L",6
"lib1","SARS-CoV-2","AGCATGACCAATATCA",8,31.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40Y D98Y V103H Y143L P161L F167R T201K",7
"lib1","SARS-CoV-2","AGCATGAGACGCATAT",3,53.74,9.5,-1.26,0.18,1.84,1.14,0.01,">1 nonsynonymous","F99V P149T",2
"lib1","SARS-CoV-2","AGCATGATGCATAATA",11,65.22,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A89V A105D",2
"lib1","SARS-CoV-2","AGCATGATGCCGCTTA",4,29.44,6.38,-4.38,0.54,1.5,1.16,0.02,"1 nonsynonymous","C102T",1
"lib1","SARS-CoV-2","AGCATGCAACACTAAT",6,40.51,8.6,-2.16,0.29,1.5,1,0.03,">1 nonsynonymous","S41A S69V T140R",3
"lib1","SARS-CoV-2","AGCATGCAATAAAATT",9,23.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49I D59H F99H L125M F156N",5
"lib1","SARS-CoV-2","AGCATGCATACAGACT",7,32.66,7.58,-3.19,0.37,1.5,1,0.04,">1 nonsynonymous","V11H K87I L95H F156A T170V",5
"lib1","SARS-CoV-2","AGCATGCCAGTTTCTG",5,19.91,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49N F99V K114N P149L G155L",5
"lib1","SARS-CoV-2","AGCATGCCATACACCC",5,27.11,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F70I S113Y N157L",3
"lib1","SARS-CoV-2","AGCATGCGAGTCCCAT",2,11.97,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","W23M D90Y",2
"lib1","SARS-CoV-2","AGCATGCGCCACTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","C49F Y91* D112*",3
"lib1","SARS-CoV-2","AGCATGGAACAGATCT",3,34.4,10.86,0.1,0.12,2.93,1.03,0,">1 nonsynonymous","N1S P149K A190G",3
"lib1","SARS-CoV-2","AGCATGGAGATCAATG",4,2.74,NA,NA,NA,NA,NA,NA,"stop","R25M T100N P149* F156L",4
"lib1","SARS-CoV-2","AGCATGGCAGTCTGTA",1,20.97,10.49,-0.27,0.12,2.86,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCATGGCCATAACAA",7,45.09,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K94G N120M Q168C",3
"lib1","SARS-CoV-2","AGCATGGCTGCGCAAT",2,5.24,10.8,0.03,0.17,2.77,1.21,0.01,"1 nonsynonymous","D97H",1
"lib1","SARS-CoV-2","AGCATGGTACTGACAC",3,36.62,6,-4.76,0.65,3,1.13,0,">1 nonsynonymous","A89S C158E",2
"lib1","SARS-CoV-2","AGCATGGTTGCAGCTT",2,27.35,9.76,-1,0.06,2.89,1.07,0,">1 nonsynonymous","S41K N118D",2
"lib1","SARS-CoV-2","AGCATGTAAAAATTTC",4,11.14,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F12W S41I R127W",3
"lib1","SARS-CoV-2","AGCATGTAAAGAATTG",4,126.49,10.8,0.03,0.09,2.93,1.04,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","AGCATGTGTACAAGTA",3,87.47,9.19,-1.57,0.06,2.82,1.12,0,"1 nonsynonymous","G117C",1
"lib1","SARS-CoV-2","AGCATGTTAATCGTAA",1,65.71,10.37,-0.39,0.04,2.86,1.02,0,">1 nonsynonymous","R27L D90R K132T",3
"lib1","SARS-CoV-2","AGCATTAAACAACCGG",1,9.44,10.32,-0.45,0.16,2.87,1.09,0.01,">1 nonsynonymous","Y39E N110V",2
"lib1","SARS-CoV-2","AGCATTAACTATACGT",4,139.85,8.78,-1.98,0.08,2.66,1.1,0,">1 nonsynonymous","N1L G83S T148S F156V P169T G174N",6
"lib1","SARS-CoV-2","AGCATTAATACCACAC",1,13.56,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N4R F167R",2
"lib1","SARS-CoV-2","AGCATTAATCTATGCG",14,71.03,6,-4.76,1.82,1.5,1.18,0.01,">1 nonsynonymous","V71K K94H T201I",3
"lib1","SARS-CoV-2","AGCATTACCTCACGCA",3,49.42,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y39R C61V T140G G146V G155Y K198V",6
"lib1","SARS-CoV-2","AGCATTACTGACCCGG",4,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53R V103R",2
"lib1","SARS-CoV-2","AGCATTAGGAAGTAGG",3,24.35,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","K56H L95N E141L",3
"lib1","SARS-CoV-2","AGCATTATACTTTCGC",7,1.22,NA,NA,NA,NA,NA,NA,"stop","D34* K56T N64*",3
"lib1","SARS-CoV-2","AGCATTCAAAACCGGT",2,2.66,NA,NA,NA,NA,NA,NA,"stop","G9* V115I",2
"lib1","SARS-CoV-2","AGCATTCAAGTGACAT",6,130.66,10.71,-0.06,0.07,2.86,1.07,0,">1 nonsynonymous","G9K L122F",2
"lib1","SARS-CoV-2","AGCATTCACTACTCAT",4,1.76,NA,NA,NA,NA,NA,NA,"stop","K26A K56T P82* L122K R179M",5
"lib1","SARS-CoV-2","AGCATTCCCCGCTGAA",1,26.64,9.84,-0.92,0.14,2.04,1.09,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","AGCATTCGGAACAAGG",3,8.86,7.28,-3.48,0.83,1.5,1.01,0.08,">1 nonsynonymous","T3R T46S P96L",3
"lib1","SARS-CoV-2","AGCATTCGTTGCTAAC",2,14.27,10.74,-0.02,0.1,2.93,1.05,0.01,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AGCATTGAAAAAACTA",3,24.94,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","F99I N107G",2
"lib1","SARS-CoV-2","AGCATTGAGGCGTATA",6,11.15,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N13P S41W K87V Y119H Y143L",5
"lib1","SARS-CoV-2","AGCATTGCTTAAACCT",10,234.99,10.58,-0.18,0.03,2.86,1.04,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","AGCATTGGTACCGGGG",2,40.41,10.31,-0.45,0.11,2.67,1.08,0.01,">1 nonsynonymous","Y50W T85Y S139A",3
"lib1","SARS-CoV-2","AGCATTGTGAAACATT",6,56.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T85N A89T S139Y N157W",4
"lib1","SARS-CoV-2","AGCATTTAGTGTGATG",1,10.76,10.73,-0.03,0.09,3,1,0,">1 nonsynonymous","S129Y A192V",2
"lib1","SARS-CoV-2","AGCATTTATACAAATG",1,27.6,8.01,-2.75,0.17,2.24,1.05,0.01,">1 nonsynonymous","Y35L G51R Y119M F156T P169I",5
"lib1","SARS-CoV-2","AGCATTTCATTGCACA",4,38.65,10.74,-0.02,0.07,2.89,1.03,0,">1 nonsynonymous","S41Y E141N",2
"lib1","SARS-CoV-2","AGCATTTCCACCAGAA",4,0.17,NA,NA,NA,NA,NA,NA,"stop","P7F Y35F F167*",3
"lib1","SARS-CoV-2","AGCATTTGCAATTCTA",2,5.8,9.01,-1.75,0.44,2.21,1.01,0.04,">1 nonsynonymous","G83Y W106G I138T",3
"lib1","SARS-CoV-2","AGCATTTTATTCAGCC",8,15.4,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","E10W S19L A33D",3
"lib1","SARS-CoV-2","AGCATTTTCGACGGCA",2,13.16,7.75,-3.01,0.4,1.5,1.12,0.05,">1 nonsynonymous","S29R Y50V A89S",3
"lib1","SARS-CoV-2","AGCATTTTGAAAATGC",1,12.11,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A89L V173A T201L",3
"lib1","SARS-CoV-2","AGCCAAAAAACCAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","R25* F156W",2
"lib1","SARS-CoV-2","AGCCAAAAATTACGTT",15,91.23,9.58,-1.18,0.18,1.8,1.15,0.01,">1 nonsynonymous","R78I W106T N130S",3
"lib1","SARS-CoV-2","AGCCAAACCGATGGGA",4,51.77,9.32,-1.45,0.16,1.67,1.14,0.01,">1 nonsynonymous","C49I R78Y",2
"lib1","SARS-CoV-2","AGCCAAACGAATAGTT",4,66.59,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","S45P D68K R78M G174H",4
"lib1","SARS-CoV-2","AGCCAAACTCAGGGCG",3,0.89,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","AGCCAAAGCCACACAT",3,10.6,10.34,-0.43,0.06,2.78,1.14,0,">1 nonsynonymous","A33S P191G",2
"lib1","SARS-CoV-2","AGCCAAAGGTCGATTG",4,60.3,10.21,-0.56,0.07,2.79,1,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","AGCCAAATAAATCTGC",3,26.8,10.64,-0.13,0.09,2.82,1.12,0,">1 nonsynonymous","T55R E141I",2
"lib1","SARS-CoV-2","AGCCAAATACTCTGCT",2,15.21,8.48,-2.29,0.34,1.5,1,0.07,">1 nonsynonymous","S45R W106V S129C",3
"lib1","SARS-CoV-2","AGCCAAATAGTCAGGG",1,22.26,10.86,0.1,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCAACAATAAGGAT",3,0.37,NA,NA,NA,NA,NA,NA,"stop","C61* G174M",2
"lib1","SARS-CoV-2","AGCCAACATGTTGTCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1H P7S V11G V65N W106L G117K Y165V L183* T201L",9
"lib1","SARS-CoV-2","AGCCAACCATTCTAGT",1,95.89,8.6,-2.16,0.1,2.92,1.03,0.01,">1 nonsynonymous","V153L G166D V173H",3
"lib1","SARS-CoV-2","AGCCAACCTTAACGAC",1,26.22,10.84,0.07,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCAACGCAGGTTTA",1,14.2,8.75,-2.02,0.17,1.91,1.12,0.01,">1 nonsynonymous","T46F N107T",2
"lib1","SARS-CoV-2","AGCCAACTAAATGGAC",2,33.61,9.92,-0.84,0.14,2.21,1.05,0.01,">1 nonsynonymous","Q79K G83L",2
"lib1","SARS-CoV-2","AGCCAACTTTATCATT",3,23.18,10.65,-0.11,0.09,2.96,1.05,0,"1 nonsynonymous","Q144N",1
"lib1","SARS-CoV-2","AGCCAAGCACTGTAGG",1,27.73,10.37,-0.39,0.05,2.97,1,0,">1 nonsynonymous","I28M Y123T",2
"lib1","SARS-CoV-2","AGCCAAGCCTCCATGT",6,34.05,9.52,-1.24,0.23,1.69,1.13,0.02,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","AGCCAAGGAATAAAAC",19,131.3,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F17E F62R K132L",3
"lib1","SARS-CoV-2","AGCCAAGGTACGTAAG",12,134.69,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40C P54G Y121T Y143V",4
"lib1","SARS-CoV-2","AGCCAAGGTTTCAACT",1,1.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","AGCCAATAAACAGGCA",2,107.28,10.8,0.04,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCAATAACCATGGA",5,47.79,6.14,-4.63,1.02,1.5,1.17,0.04,">1 nonsynonymous","F47D T100N K132M N151Q",4
"lib1","SARS-CoV-2","AGCCAATAACTTCACC",1,6.93,6.03,-4.73,1.74,3,1.02,0,">1 nonsynonymous","I80M Y93C V173I",3
"lib1","SARS-CoV-2","AGCCAATATATTGACG",2,11.85,10.52,-0.25,0.12,2.8,1.17,0.01,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","AGCCAATATCATTGAA",5,55.59,10.67,-0.1,0.04,2.94,1.01,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","AGCCAATATCCTAACA",7,179.52,10.21,-0.55,0.05,2.75,1,0,">1 nonsynonymous","G51N G83S D97Y",3
"lib1","SARS-CoV-2","AGCCAATATGGTAAAA",8,2.8,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","AGCCAATCACTCAAGT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","V11S Y35R D90R G116* K128I E141S Y165S V173S",8
"lib1","SARS-CoV-2","AGCCAATCATAGAAAA",2,2.04,NA,NA,NA,NA,NA,NA,"stop","P54A N151*",2
"lib1","SARS-CoV-2","AGCCAATCCAAAGGCA",4,14.03,6.42,-4.34,0.92,1.5,1.1,0.07,">1 nonsynonymous","I88R L95F R136L N157F",4
"lib1","SARS-CoV-2","AGCCAATCCTATACAA",4,42.95,7,-3.76,0.22,1.5,1.14,0.01,">1 nonsynonymous","W23M D59K C195H",3
"lib1","SARS-CoV-2","AGCCAATGACGAAAAC",5,73.97,8.15,-2.61,0.17,1.97,1.12,0.01,">1 nonsynonymous","S41N T100C C158R N171S",4
"lib1","SARS-CoV-2","AGCCAATGCCAAACCA",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G I104D Y123D R136I C158M",5
"lib1","SARS-CoV-2","AGCCAATGTGGTGAAG",2,27.14,10.08,-0.68,0.14,2.28,1,0.01,">1 nonsynonymous","A42H S69N D90M",3
"lib1","SARS-CoV-2","AGCCAATTATATAACA",3,51,10.38,-0.39,0.04,2.88,1.06,0,">1 nonsynonymous","R16C N151L Q168S",3
"lib1","SARS-CoV-2","AGCCAATTTGGTTTCG",1,11.27,10,-0.76,0.14,2.22,1,0.01,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","AGCCACAAACTCTCTA",5,33.49,6.56,-4.21,0.43,1.5,1.19,0.03,">1 nonsynonymous","T15G G51C D98L K198V",4
"lib1","SARS-CoV-2","AGCCACAAATGAGTAC",2,14.21,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","I2Y L95R",2
"lib1","SARS-CoV-2","AGCCACACCACCTAAA",1,27.2,10.84,0.07,0.07,2.95,1,0,">1 nonsynonymous","D59H S129F P197S",3
"lib1","SARS-CoV-2","AGCCACATTAAATATC",1,19.31,10.65,-0.11,0.1,2.95,1,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","AGCCACCAACACGAGA",5,35.26,6,-4.76,2,3,1.18,0,">1 nonsynonymous","D90P T148N",2
"lib1","SARS-CoV-2","AGCCACCAACGTGTCA",2,17.93,10.12,-0.64,0.1,2.94,1,0,"1 nonsynonymous","G155W",1
"lib1","SARS-CoV-2","AGCCACCCAGGGACCA",2,32.46,10.78,0.02,0.07,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCACCCCTGGGGAG",1,8.06,6,-4.76,1.62,3,1,0,">1 nonsynonymous","N30S G74L K94I V181Q H189F",5
"lib1","SARS-CoV-2","AGCCACCCTCGCCATA",2,31.97,6.82,-3.94,0.31,1.6,1.2,0.01,">1 nonsynonymous","L5N L60M I142Y C150P",4
"lib1","SARS-CoV-2","AGCCACCGTTTAAAAT",1,22.62,6.08,-4.69,0.8,3,1.18,0.01,">1 nonsynonymous","G152C C158M",2
"lib1","SARS-CoV-2","AGCCACGAACTGAAAG",6,79.47,9.95,-0.81,0.12,2.32,1.04,0.01,">1 nonsynonymous","P149Q P161E",2
"lib1","SARS-CoV-2","AGCCACGAATAATCAA",8,176.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37G S43F D112W G117V C158D",5
"lib1","SARS-CoV-2","AGCCACGACTACTGAA",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N T46S A89L P96L",4
"lib1","SARS-CoV-2","AGCCACGCGATGCATA",2,1,NA,NA,NA,NA,NA,NA,"stop","A81* C150Y G166L",3
"lib1","SARS-CoV-2","AGCCACGCTGCTCCGT",2,22.75,7.5,-3.27,0.4,1.5,1.17,0.05,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","AGCCACTAACCAAAAC",4,13.08,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","S41A C61G D68K D98K V103R F167C",6
"lib1","SARS-CoV-2","AGCCACTACCCTTCAA",4,103.48,6,-4.76,2,2.22,1.18,0,">1 nonsynonymous","C49G Q84I Y91C N157W Q176R",5
"lib1","SARS-CoV-2","AGCCACTACGTCCTAG",6,0.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","AGCCACTATTGCTCAG",3,50.2,10.43,-0.34,0.06,2.78,1.13,0,"1 nonsynonymous","V65F",1
"lib1","SARS-CoV-2","AGCCACTGCAACCGAA",4,20.28,9.67,-1.09,0.23,1.76,1.11,0.01,"1 nonsynonymous","Y50C",1
"lib1","SARS-CoV-2","AGCCACTGTCCACAGC",3,45,10.46,-0.3,0.05,2.91,1.06,0,">1 nonsynonymous","K87P S200Y",2
"lib1","SARS-CoV-2","AGCCACTTAAAAAAGT",4,96.07,10.64,-0.12,0.05,2.9,1.08,0,">1 nonsynonymous","C61S K198V",2
"lib1","SARS-CoV-2","AGCCACTTCAATACGG",5,25.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V65E R127M E135K G146T R179V",5
"lib1","SARS-CoV-2","AGCCAGACACATAAGC",8,60.55,10.53,-0.23,0.05,2.92,1.02,0,">1 nonsynonymous","E10S V37E D90R I104Y",4
"lib1","SARS-CoV-2","AGCCAGACCATGCTCC",2,24.58,10.48,-0.28,0.05,2.94,1.01,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","AGCCAGATCCTTGACC",2,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L V77F V115P",3
"lib1","SARS-CoV-2","AGCCAGCAAACAAGCA",1,22.34,6.04,-4.73,0.74,1.5,1.12,0.02,">1 nonsynonymous","V11L V37G T85M L95K",4
"lib1","SARS-CoV-2","AGCCAGCATGCCATAT",4,27.7,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","C61V V103H Y123N",3
"lib1","SARS-CoV-2","AGCCAGCCGAAGGATT",3,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C R25L S41D G51Y V103I Y121S S129R",7
"lib1","SARS-CoV-2","AGCCAGCGACCTTGCG",5,91.72,10.64,-0.13,0.12,2.67,1.09,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","AGCCAGCGCTGGCACC",3,70.22,10.16,-0.6,0.05,2.96,1,0,">1 nonsynonymous","N1K Y119R",2
"lib1","SARS-CoV-2","AGCCAGCTCTCAGTAT",2,18.96,10.39,-0.37,0.16,2.71,1.15,0.01,">1 nonsynonymous","C61V S184L",2
"lib1","SARS-CoV-2","AGCCAGCTTCCAGAGC",1,8.67,10.15,-0.61,0.12,2.81,1,0,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","AGCCAGCTTGAGAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V K87S G117V Y119P S129L P149T",6
"lib1","SARS-CoV-2","AGCCAGGACAACGACG",12,92.92,8.26,-2.51,0.16,2.49,1.1,0.01,">1 nonsynonymous","F44L D97G Y175N",3
"lib1","SARS-CoV-2","AGCCAGGACCATGTGC",4,76.61,9.54,-1.23,0.04,2.87,1.1,0,">1 nonsynonymous","Y39I K87Y V115E G174E",4
"lib1","SARS-CoV-2","AGCCAGGAGGTAACCA",6,57.17,10.66,-0.11,0.08,2.93,1.04,0,">1 nonsynonymous","A42L S53T",2
"lib1","SARS-CoV-2","AGCCAGGAGTTGCTTG",3,27.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L I88F Y121D R127M C158I",5
"lib1","SARS-CoV-2","AGCCAGGATACGGAGG",5,34.95,6,-4.76,2,3,1.23,0,">1 nonsynonymous","V37L G101R N120L T201R",4
"lib1","SARS-CoV-2","AGCCAGTACTAATCCG",8,323.76,10.09,-0.67,0.06,2.51,1.01,0,">1 nonsynonymous","T46I N64D Y178N",3
"lib1","SARS-CoV-2","AGCCAGTAGGCCCATG",5,108.13,10.2,-0.57,0.04,2.92,1.01,0,">1 nonsynonymous","F47V K87N T148A",3
"lib1","SARS-CoV-2","AGCCAGTCATAAAACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N Y93V A192S",3
"lib1","SARS-CoV-2","AGCCAGTCGCCTTCCA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Y V71R A105I",3
"lib1","SARS-CoV-2","AGCCAGTGAACTCATT",4,5.79,NA,NA,NA,NA,NA,NA,"stop","F8* T15V S36W S45F Y178T",5
"lib1","SARS-CoV-2","AGCCAGTTCGTTGAAG",3,50.71,8.87,-1.9,0.08,2.91,1.04,0,">1 nonsynonymous","Y91I F156K G174N",3
"lib1","SARS-CoV-2","AGCCAGTTGAACTGAA",2,9.45,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib1","SARS-CoV-2","AGCCAGTTTAAAACAG",1,6.87,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","N120W G146E G172W",3
"lib1","SARS-CoV-2","AGCCATAAAATGTGAC",1,42.64,10.7,-0.07,0.07,2.91,1,0,"1 nonsynonymous","S45E",1
"lib1","SARS-CoV-2","AGCCATAAACGTTAAA",3,32.85,10.63,-0.13,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCATAATCTATTGC",12,93.77,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","F62W V77M D137G",3
"lib1","SARS-CoV-2","AGCCATAATTATAAAT",1,15.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S45E Q84P K94M N120Y F156Y",5
"lib1","SARS-CoV-2","AGCCATACACGTACTG",1,48.16,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","E10G A105C R127G",3
"lib1","SARS-CoV-2","AGCCATACCTGCCCGA",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y S45H A81Y",3
"lib1","SARS-CoV-2","AGCCATACTCAATCCA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","T3L F8N R25I G83S Q144*",5
"lib1","SARS-CoV-2","AGCCATACTTGCGCAA",8,63.84,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F8V A14F D97Q D112M I142Y",5
"lib1","SARS-CoV-2","AGCCATAGAACAGAGT",1,68.16,7.17,-3.6,0.38,1.5,1.16,0.04,">1 nonsynonymous","F99L Y178I",2
"lib1","SARS-CoV-2","AGCCATAGCCTTCAAG",6,80.83,10.43,-0.34,0.05,2.96,1,0,">1 nonsynonymous","K87M T100N N130H T140E",4
"lib1","SARS-CoV-2","AGCCATAGTAACTCAC",4,40.45,6.05,-4.71,1.19,1.5,1.18,0.03,">1 nonsynonymous","L38Q N40K W106I S139R",4
"lib1","SARS-CoV-2","AGCCATATACGAGTGA",1,27.94,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88R K128I",2
"lib1","SARS-CoV-2","AGCCATATCATATCGA",5,139.63,10.74,-0.02,0.06,2.91,1.04,0,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","AGCCATATGAAATTAC",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T A89N P161E T201R",4
"lib1","SARS-CoV-2","AGCCATATTGGCACCG",2,124.68,10.82,0.06,0.09,2.88,1.04,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","AGCCATCCTTGAGAGG",2,11.05,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T63N V77T I80S S147P",4
"lib1","SARS-CoV-2","AGCCATCGGGTGCAAA",2,9.92,6.87,-3.89,0.25,2.18,1.06,0.01,">1 nonsynonymous","S41P Y143R",2
"lib1","SARS-CoV-2","AGCCATCGTATTAAGG",1,8.04,10.84,0.07,0.1,2.96,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCCATCTAAGAATCG",6,32.69,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V20E K87S P96M Y119E N171M H189F",6
"lib1","SARS-CoV-2","AGCCATCTATCGTCCG",3,23.04,10.1,-0.66,0.12,2.66,1.06,0,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","AGCCATCTTCTATTCC",4,55.45,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","Q144T P161R",2
"lib1","SARS-CoV-2","AGCCATGCATCCCTAT",2,0.51,NA,NA,NA,NA,NA,NA,"stop","G51Y D112* Y175N",3
"lib1","SARS-CoV-2","AGCCATGCTTAGGTAT",4,34.27,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L5E R124L P133H T201W",4
"lib1","SARS-CoV-2","AGCCATGGTTGCGCGG",4,45.35,10.7,-0.06,0.08,2.84,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCATGTTAGCGAAC",2,24.2,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F47S K94H V173T",3
"lib1","SARS-CoV-2","AGCCATTCGATTAACC",3,5.21,NA,NA,NA,NA,NA,NA,"stop","A42* K56E K94A",3
"lib1","SARS-CoV-2","AGCCATTCGTGACGTA",2,26.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E F47L W106A V153R",4
"lib1","SARS-CoV-2","AGCCATTTAAATTGTA",5,24.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1Y D68L D137L G155V",4
"lib1","SARS-CoV-2","AGCCATTTCCTGTGGA",3,8.03,NA,NA,NA,NA,NA,NA,"stop","N1C T55V K87* I142P L162G",5
"lib1","SARS-CoV-2","AGCCCAAAAATTCAAT",6,121.83,10.78,0.01,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCCAAAAGCGAATC",3,16.72,6,-4.76,2,3,1.27,0.03,">1 nonsynonymous","T63M L183P",2
"lib1","SARS-CoV-2","AGCCCAAATATCTTGC",1,27.36,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T85E R124L K132I",3
"lib1","SARS-CoV-2","AGCCCAACACCGCAAG",1,37.81,10.48,-0.29,0.07,2.91,1.01,0,">1 nonsynonymous","I2S C6A Y35I",3
"lib1","SARS-CoV-2","AGCCCAACATAGCAAC",7,49.7,7.41,-3.35,0.13,1.7,1.12,0,"1 nonsynonymous","C150K",1
"lib1","SARS-CoV-2","AGCCCAAGCCATGATA",6,14.58,6,-4.76,2,3,1.1,0.01,"1 nonsynonymous","V20K",1
"lib1","SARS-CoV-2","AGCCCAATTAAATCAA",7,125.43,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","V11L S45G T85E Y123L S139P Q176R",6
"lib1","SARS-CoV-2","AGCCCAATTCGAAGTA",7,0.84,NA,NA,NA,NA,NA,NA,"stop","D59G D68L G86R V103*",4
"lib1","SARS-CoV-2","AGCCCACAACACAAAG",7,0.77,NA,NA,NA,NA,NA,NA,"stop","G86K T201*",2
"lib1","SARS-CoV-2","AGCCCACCATACCTCC",3,1.65,NA,NA,NA,NA,NA,NA,"stop","F12Y W106* N118S C158G P169Q F185H",6
"lib1","SARS-CoV-2","AGCCCACGCTGACACC",4,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L D34P L60C G101D",4
"lib1","SARS-CoV-2","AGCCCACTGCATTCGG",4,99.3,10.33,-0.43,0.03,2.93,1.02,0,">1 nonsynonymous","L5C S184M",2
"lib1","SARS-CoV-2","AGCCCAGATACGACGG",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L N118A Q168L",3
"lib1","SARS-CoV-2","AGCCCAGCAAGGACGG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","AGCCCAGGTGCTTCTC",6,12.7,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T15H F44L P96R L122G",4
"lib1","SARS-CoV-2","AGCCCAGTATGATATC",7,49.73,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G101D Q144I",2
"lib1","SARS-CoV-2","AGCCCAGTCTAGTCAT",6,52.23,9.55,-1.21,0.12,1.83,1.11,0.01,">1 nonsynonymous","T55G Q84L N107A",3
"lib1","SARS-CoV-2","AGCCCAGTGCGCTGCA",1,36.93,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","S43P K56T N64D G86Y Y175E L187I",6
"lib1","SARS-CoV-2","AGCCCAGTTGTTCATT",2,73.84,9.21,-1.55,0.07,2.85,1.11,0,">1 nonsynonymous","K56H G116F G174E",3
"lib1","SARS-CoV-2","AGCCCATAAATGATAT",7,83.21,10.76,-0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCCATCCGGCTCCC",6,63.61,6.42,-4.34,0.38,1.5,1.1,0.01,">1 nonsynonymous","L95P G116L Y123E Y143V",4
"lib1","SARS-CoV-2","AGCCCATGATATAAGC",4,22.95,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K26P N110A",2
"lib1","SARS-CoV-2","AGCCCCAACTTGAATA",8,127.4,10.02,-0.74,0.07,2.81,1.04,0,">1 nonsynonymous","S29W P149T F156L",3
"lib1","SARS-CoV-2","AGCCCCAAGGGACCCT",4,33.52,6,-4.76,1.22,2.07,1.11,0,">1 nonsynonymous","K48G V65E G152V",3
"lib1","SARS-CoV-2","AGCCCCACAAAAATCT",8,39.26,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","V71R",1
"lib1","SARS-CoV-2","AGCCCCATAATTTACA",6,20.11,10.45,-0.31,0.05,2.95,1,0,">1 nonsynonymous","Y123V G196R",2
"lib1","SARS-CoV-2","AGCCCCATACTATGCC",10,19.86,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V20G S41A T140H S164T T170V",5
"lib1","SARS-CoV-2","AGCCCCCAACCGGAAT",7,122.22,10.7,-0.06,0.06,2.9,1.06,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","AGCCCCCCAAATCAAA",4,42.05,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","T3R S19Q N40Q L122P",4
"lib1","SARS-CoV-2","AGCCCCCCAGATAATA",2,14.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L57K L131H",2
"lib1","SARS-CoV-2","AGCCCCCCATAGTTTT",5,25.01,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V11L Y121M K132L N151D Y175C",5
"lib1","SARS-CoV-2","AGCCCCCCATGAGCGT",2,51.53,10.7,-0.06,0.04,2.91,1.04,0,"1 nonsynonymous","T85F",1
"lib1","SARS-CoV-2","AGCCCCCCCCTTCGCA",6,47.13,8.88,-1.88,0.14,1.76,1.08,0.01,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","AGCCCCCCTTATACAT",4,21.95,9.56,-1.2,0.21,1.96,1.08,0.02,">1 nonsynonymous","F17L C61L K198S",3
"lib1","SARS-CoV-2","AGCCCCCGCCACCGAA",8,161.64,9.8,-0.96,0.1,2.36,1.07,0,">1 nonsynonymous","C61K D90M E141L T148L",4
"lib1","SARS-CoV-2","AGCCCCCTTCTCCTGC",7,42.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I80Q D98Y",2
"lib1","SARS-CoV-2","AGCCCCGTAATTAATA",5,87.27,6.09,-4.67,0.81,1.5,1.16,0.02,">1 nonsynonymous","Y91G S139Y Q176K P197S",4
"lib1","SARS-CoV-2","AGCCCCTAAGTGGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","D34* Y121M",2
"lib1","SARS-CoV-2","AGCCCCTACCAAATTG",5,14.98,6,-4.76,1.5,1.5,1.17,0.03,">1 nonsynonymous","V65E G146F",2
"lib1","SARS-CoV-2","AGCCCCTAGCATACAG",8,20.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92H I104R",2
"lib1","SARS-CoV-2","AGCCCCTAGGATTAAT",1,13.65,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G9H K94T",2
"lib1","SARS-CoV-2","AGCCCCTTTAGGCCGG",7,175.63,10.76,0,0.06,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCCCTTTCGTCAGC",8,33.04,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6V A18M I28K",3
"lib1","SARS-CoV-2","AGCCCCTTTTAGCCAC",1,2.45,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib1","SARS-CoV-2","AGCCCGAACGGTGAAT",7,44.64,10.49,-0.27,0.09,2.79,1.11,0,">1 nonsynonymous","T55L F134A",2
"lib1","SARS-CoV-2","AGCCCGAATAATAATT",8,13.28,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13Y P96S S108D T201M",4
"lib1","SARS-CoV-2","AGCCCGAATTAATTCA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","I2* L95S K128L G146E G174P Y178F",6
"lib1","SARS-CoV-2","AGCCCGACTGATGTCT",7,0.18,NA,NA,NA,NA,NA,NA,"stop","F126L T148* N151G",3
"lib1","SARS-CoV-2","AGCCCGATAAAAATTA",3,35.03,10.77,0,0.07,2.89,1.09,0,">1 nonsynonymous","I2N L5P",2
"lib1","SARS-CoV-2","AGCCCGCAAAAGTCTA",6,53.83,6,-4.76,2,1.51,1.2,0.02,">1 nonsynonymous","F17A T46I P54L T85S Y123V L131S G152R",7
"lib1","SARS-CoV-2","AGCCCGCCCATGGTGA",1,15.28,10.41,-0.36,0.12,2.8,1.1,0.01,">1 nonsynonymous","T63R V77I",2
"lib1","SARS-CoV-2","AGCCCGGGGAAGCCTT",5,23.44,6.39,-4.38,0.64,1.5,1.24,0.04,">1 nonsynonymous","N4G N13L G86Y",3
"lib1","SARS-CoV-2","AGCCCGTAAACGAGTT",1,13.55,10.6,-0.17,0.1,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCCGTCAAACGGCT",11,184.3,10.1,-0.67,0.05,2.78,1.03,0,">1 nonsynonymous","C61L F134R",2
"lib1","SARS-CoV-2","AGCCCGTTCTATGATA",5,6.81,NA,NA,NA,NA,NA,NA,"stop","G9T N92*",2
"lib1","SARS-CoV-2","AGCCCGTTCTGTATAA",3,49.11,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A18P D34L T55N Y93I K132N G146R",6
"lib1","SARS-CoV-2","AGCCCGTTCTTATTAT",1,6.67,6,-4.76,2,3,1.08,0,">1 nonsynonymous","A67S F99A K132T",3
"lib1","SARS-CoV-2","AGCCCTAATAAAGTAC",3,38.2,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","I80N W106L",2
"lib1","SARS-CoV-2","AGCCCTACAAAGTTTG",3,54.56,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12D N107C V115S P161V",4
"lib1","SARS-CoV-2","AGCCCTACTAACAGCA",2,53.08,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K56C Y119H G155R Y178S K198S",5
"lib1","SARS-CoV-2","AGCCCTATACTTGGGG",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I D90F L122F K128T H189S K198S",6
"lib1","SARS-CoV-2","AGCCCTATTTGCAGAC",1,8.55,10.84,0.08,0.14,3,1.01,0.01,"1 nonsynonymous","K128Q",1
"lib1","SARS-CoV-2","AGCCCTCAAAATCCTA",6,172.25,10.7,-0.06,0.08,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCCTCAAATAAGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P T63L P96M G155V",4
"lib1","SARS-CoV-2","AGCCCTCAACGTAATC",1,23.38,6.5,-4.26,0.51,1.5,1.19,0.03,">1 nonsynonymous","C49V W106G N118H Y119S Q176C",5
"lib1","SARS-CoV-2","AGCCCTCTCATCGGTA",5,37.46,6.78,-3.98,0.43,1.5,1.24,0.02,">1 nonsynonymous","D90T N107D",2
"lib1","SARS-CoV-2","AGCCCTGCCCGAACAA",1,71.63,8.18,-2.58,0.21,1.5,1.08,0.02,">1 nonsynonymous","W106V Y121V F156P",3
"lib1","SARS-CoV-2","AGCCCTGCCGAATTGT",1,26.64,10.24,-0.53,0.1,2.55,1.06,0,">1 nonsynonymous","S45K T55H V77M",3
"lib1","SARS-CoV-2","AGCCCTGGAACCTTTA",4,0,NA,NA,NA,NA,NA,NA,"stop","S41L T100Y S164R T170*",4
"lib1","SARS-CoV-2","AGCCCTTAAAACACAT",4,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T K56S K94R N120Q K198R",5
"lib1","SARS-CoV-2","AGCCCTTAACATTAAT",4,178.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4L F99E P177Y",3
"lib1","SARS-CoV-2","AGCCCTTAACTAGAAA",2,39.55,6,-4.76,1.65,1.5,1.29,0.06,">1 nonsynonymous","P82V W106T P161F",3
"lib1","SARS-CoV-2","AGCCCTTAATATATAG",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Q P54I K94Y F134L E154S",5
"lib1","SARS-CoV-2","AGCCCTTTACTGGAAC",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52M I88V S113N Y165W",4
"lib1","SARS-CoV-2","AGCCCTTTAGACCGGA",2,47.63,9.92,-0.85,0.11,2.38,1.02,0,">1 nonsynonymous","N4S I28G V32R",3
"lib1","SARS-CoV-2","AGCCGAAATATTGTCC",7,41.88,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L5V G101S Q163L",3
"lib1","SARS-CoV-2","AGCCGAACCAGTATAA",3,38.13,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4R A89P P177T",3
"lib1","SARS-CoV-2","AGCCGAAGGCTAACTT",5,39.32,6.35,-4.41,0.78,1.5,1.22,0.03,">1 nonsynonymous","L60I P96F L122F",3
"lib1","SARS-CoV-2","AGCCGAAGGGACATCA",2,9.68,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","V77T Y91E",2
"lib1","SARS-CoV-2","AGCCGAAGTTAGCAGG",7,40.38,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14Y V37M Y93M",3
"lib1","SARS-CoV-2","AGCCGAATTACGGATT",4,62.82,9.74,-1.02,0.15,2.18,1.07,0.01,">1 nonsynonymous","D34I F62Q D97L",3
"lib1","SARS-CoV-2","AGCCGAATTCAACCAA",5,69.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K48Y N58S A89N Y143G P197S",5
"lib1","SARS-CoV-2","AGCCGACAGGTTCAGC",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L F17L K56V T63P N110M",5
"lib1","SARS-CoV-2","AGCCGACCATGATAGC",3,59.73,10.75,-0.02,0.09,2.83,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCGACCTATTTGAA",1,22.49,10.85,0.09,0.13,2.81,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCCGACGGGTATACC",3,7.23,6.04,-4.73,1.36,1.5,1.12,0.04,">1 nonsynonymous","T55P D90K V103T E141S C150I P161R",6
"lib1","SARS-CoV-2","AGCCGACTGATTTCCC",5,113.27,10.75,-0.02,0.08,2.89,1.08,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","AGCCGAGCAAATTACT",4,9.35,9.59,-1.18,0.18,2.36,1.39,0.02,">1 nonsynonymous","L38S L122G",2
"lib1","SARS-CoV-2","AGCCGAGGGCTTATAC",9,124.49,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F8K Y21S Y35F G51E",4
"lib1","SARS-CoV-2","AGCCGATATATCCCGA",1,91.33,10.67,-0.09,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCGCAAAATAACCG",9,9.7,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib1","SARS-CoV-2","AGCCGCATACCTCTAA",1,1.78,NA,NA,NA,NA,NA,NA,"stop","T3M D90* K128M",3
"lib1","SARS-CoV-2","AGCCGCCGCGACCTTG",5,165.22,8.49,-2.27,0.12,2.76,1.03,0.01,">1 nonsynonymous","Y35M S113F",2
"lib1","SARS-CoV-2","AGCCGCCGGCAGAAGG",4,84.08,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12C R73S N118L V173L",4
"lib1","SARS-CoV-2","AGCCGCCTTCAAACGT",10,90.01,9.83,-0.94,0.11,2.1,1.06,0,">1 nonsynonymous","P96S N110R N120S I142Y",4
"lib1","SARS-CoV-2","AGCCGCGAAAGTAATG",2,76.04,10.16,-0.61,0.11,2.67,1,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","AGCCGCGATAAGCATA",15,151.58,6.49,-4.27,0.38,1.5,1.11,0.01,">1 nonsynonymous","F44H D59L D98L Y119D",4
"lib1","SARS-CoV-2","AGCCGCGATGATGAGT",3,47.78,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","G9T D90C N120G Q176L",4
"lib1","SARS-CoV-2","AGCCGCGCAGGAAATT",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172N",1
"lib1","SARS-CoV-2","AGCCGCTAAGCCCCCC",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L G86V A105G S113L G174I",5
"lib1","SARS-CoV-2","AGCCGCTCGGGGAATC",1,13.87,10,-0.76,0.1,2.97,1,0.01,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","AGCCGCTTGATATCAT",2,121.56,7.92,-2.84,0.27,1.5,1.04,0.02,">1 nonsynonymous","N4M Y178D",2
"lib1","SARS-CoV-2","AGCCGGAATACCCCGG",5,125.89,10.77,0.01,0.08,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCGGACAAAGGAAG",6,35.04,9.96,-0.8,0.15,2.16,1.03,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","AGCCGGACCACCCGTT",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104F S147N P169Q",3
"lib1","SARS-CoV-2","AGCCGGACCAGCTAGC",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65L G86I R127S L162S S184R",5
"lib1","SARS-CoV-2","AGCCGGATTCAGGTTT",2,58.32,10.78,0.02,0.05,2.94,1.03,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","AGCCGGCAGTTTTATA",6,0.86,NA,NA,NA,NA,NA,NA,"stop","P82* I138S",2
"lib1","SARS-CoV-2","AGCCGGCTAATGAGAC",6,16.06,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1D Y93L G117S T201N",4
"lib1","SARS-CoV-2","AGCCGGGGGCCGCGGC",1,13.34,10.6,-0.16,0.09,2.94,1.08,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","AGCCGGTCACATTTTA",1,13.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y93T W106C",2
"lib1","SARS-CoV-2","AGCCGGTTCATGATTG",3,22.8,9.99,-0.77,0.19,1.78,1.1,0.01,">1 nonsynonymous","D34I S41L C49L L122Q",4
"lib1","SARS-CoV-2","AGCCGTACAAATAGGC",4,99.13,10.65,-0.11,0.04,2.93,1.02,0,">1 nonsynonymous","C61Q S147D",2
"lib1","SARS-CoV-2","AGCCGTACATTAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* Y35L",2
"lib1","SARS-CoV-2","AGCCGTACTACATCAG",5,36.6,10.62,-0.15,0.06,2.97,1.02,0,">1 nonsynonymous","S36M T55S F160L",3
"lib1","SARS-CoV-2","AGCCGTATCTGATACG",1,12.72,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T3K Y39F W106L Y121T",4
"lib1","SARS-CoV-2","AGCCGTCACACGCTGG",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M A81L Y121A Y175H",4
"lib1","SARS-CoV-2","AGCCGTCAGTGAAACG",2,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Q S129L",2
"lib1","SARS-CoV-2","AGCCGTCGCAATCTTA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P Y119K",2
"lib1","SARS-CoV-2","AGCCGTTAGCGGGAGT",9,197.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K114G N120R S129L Q168A Y175S",5
"lib1","SARS-CoV-2","AGCCGTTATGTCTACG",6,32.98,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","I104D T201S",2
"lib1","SARS-CoV-2","AGCCGTTGGCTACTAC",5,49.73,10.55,-0.22,0.05,2.9,1,0,"1 nonsynonymous","A18V",1
"lib1","SARS-CoV-2","AGCCGTTTTATATCAT",4,22.7,6,-4.76,0.77,1.5,1.12,0.01,">1 nonsynonymous","K56G T63F P82H G155R",4
"lib1","SARS-CoV-2","AGCCTAAAAAATTCAA",4,37.41,8.62,-2.14,0.16,2.48,1.03,0.01,">1 nonsynonymous","D59V A145Y",2
"lib1","SARS-CoV-2","AGCCTAAATATAGAAA",1,45.23,10.48,-0.29,0.06,2.89,1.06,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","AGCCTAACAATCCGCA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* V103Y N107W S113K",4
"lib1","SARS-CoV-2","AGCCTAACATCCCATA",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R I88G T140G P161G",4
"lib1","SARS-CoV-2","AGCCTAACATTACTAA",1,46.78,8.74,-2.03,0.09,2.68,1.11,0,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","AGCCTAACCTTAAAAA",5,34.22,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","I2T T15L I72V N130H P161R",5
"lib1","SARS-CoV-2","AGCCTAATAACAAGGT",7,49.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V52P F99P A105R N151K",4
"lib1","SARS-CoV-2","AGCCTAATCACCGTCT",25,97.93,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93K V103S",2
"lib1","SARS-CoV-2","AGCCTAATTGTTTTGT",9,2.67,NA,NA,NA,NA,NA,NA,"stop","S19L K48R D59M S69N D98*",5
"lib1","SARS-CoV-2","AGCCTACAACCTGTCG",3,25.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y R25S Y50Q S129H I142V T201L",6
"lib1","SARS-CoV-2","AGCCTACAATTAAGTG",13,8.75,NA,NA,NA,NA,NA,NA,"stop","R27* G51* K128L G166M K199E",5
"lib1","SARS-CoV-2","AGCCTACACATTAAGA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","N1R L57* I138A",3
"lib1","SARS-CoV-2","AGCCTACTGTCAGAAT",3,85.99,10.88,0.11,0.06,2.94,1,0,"1 nonsynonymous","K48R",1
"lib1","SARS-CoV-2","AGCCTAGCAATGACGG",3,44.24,7.92,-2.84,0.22,1.75,1.15,0.02,">1 nonsynonymous","R27I W106V Y119P",3
"lib1","SARS-CoV-2","AGCCTAGCGCAGCGGG",4,48.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V20L S41Q D59P P177R",4
"lib1","SARS-CoV-2","AGCCTAGTAAATTCGA",5,96.17,10.79,0.02,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCTATAACGGCAAC",6,34.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","AGCCTATAGAACTTGT",5,95.09,10.65,-0.12,0.05,2.91,1.04,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","AGCCTATCCATCCTAC",6,92.95,10.83,0.06,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCTATCGAGACGAT",1,29.29,10.98,0.22,0.13,2.89,1.03,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AGCCTATCTGTATGCA",5,1.17,NA,NA,NA,NA,NA,NA,"stop","I2Y K114A Y175*",3
"lib1","SARS-CoV-2","AGCCTATGATAGAAGG",5,144.8,9.52,-1.24,0.08,2.67,1.07,0,">1 nonsynonymous","S129T Q176L",2
"lib1","SARS-CoV-2","AGCCTATGTTTGTACA",3,41.62,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W23M L95V N107R Y119G G196S",5
"lib1","SARS-CoV-2","AGCCTATTCCCCTCAT",2,15.25,8.33,-2.43,0.1,2.87,1.06,0,">1 nonsynonymous","F12I V37H S43I T170D",4
"lib1","SARS-CoV-2","AGCCTATTTTAAAGAT",2,64.62,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N92H R136S V173S",3
"lib1","SARS-CoV-2","AGCCTCAAAGCTACCT",2,24.03,6.64,-4.12,0.69,1.5,1.09,0.07,">1 nonsynonymous","G146C Y165V",2
"lib1","SARS-CoV-2","AGCCTCAAATAACCGA",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W Y121E T170Y",3
"lib1","SARS-CoV-2","AGCCTCACATTATTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y T15D P96Q R124C P149T",5
"lib1","SARS-CoV-2","AGCCTCACCTAGGCCA",4,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8C T100W G116A P149W V173P",5
"lib1","SARS-CoV-2","AGCCTCATAAACATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S29V S43* L60C F99L N107I",5
"lib1","SARS-CoV-2","AGCCTCATTCAGCTTA",3,11.8,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","F62Y I72P",2
"lib1","SARS-CoV-2","AGCCTCCAAAATCAAT",4,86.01,7.28,-3.48,0.17,1.82,1.13,0.01,">1 nonsynonymous","R16N R78Y Y143G",3
"lib1","SARS-CoV-2","AGCCTCCCAATGCGGA",7,14.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R78K D90G I104T E141T G152T",5
"lib1","SARS-CoV-2","AGCCTCCCCTCTGCGA",5,137.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A89N D137S Y178S",3
"lib1","SARS-CoV-2","AGCCTCCCCTGACCGC",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S A33S P54M D98N T140Q",5
"lib1","SARS-CoV-2","AGCCTCCCGAATCGGA",2,6.49,8.29,-2.47,0.49,2.52,1.1,0.06,">1 nonsynonymous","A18P A42N Y50T D112E",4
"lib1","SARS-CoV-2","AGCCTCCCGACCCATA",1,4.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","AGCCTCCTAATAGCAT",3,29.41,8.56,-2.21,0.17,2.09,1.11,0.01,">1 nonsynonymous","F17L S41I K87S I104M",4
"lib1","SARS-CoV-2","AGCCTCTAGCGCTGGT",1,13.52,11.06,0.29,0.15,2.96,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCCTCTATACACATC",6,186.59,10.72,-0.04,0.09,2.86,1.1,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","AGCCTCTCCCTAATTG",5,65.93,10.77,0,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCCTGAATAACTTCT",7,4.36,NA,NA,NA,NA,NA,NA,"stop","N4* F12I W106E",3
"lib1","SARS-CoV-2","AGCCTGACACAGAAAT",2,14.64,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5K L125I Q144R P161Y",4
"lib1","SARS-CoV-2","AGCCTGAGCCTGCGGC",1,102.23,10.52,-0.25,0.04,2.95,1.01,0,">1 nonsynonymous","V37R T100W",2
"lib1","SARS-CoV-2","AGCCTGATAAATGGGA",1,40.48,10.78,0.01,0.09,2.91,1.01,0,">1 nonsynonymous","R27C N64H N130C",3
"lib1","SARS-CoV-2","AGCCTGATACAGGTAT",3,88.24,6,-4.76,1.1,1.5,1.19,0.01,">1 nonsynonymous","S36W T55S I72N G117D",4
"lib1","SARS-CoV-2","AGCCTGATTTAAGATC",3,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V Y143N",2
"lib1","SARS-CoV-2","AGCCTGCTTAAAACCT",1,5.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10R A22I T85P V181P",4
"lib1","SARS-CoV-2","AGCCTGGAAATAAATT",6,39.15,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","P96S S129Y C150L S164E Q176T",5
"lib1","SARS-CoV-2","AGCCTGGCTATGTTCA",9,155.73,8.96,-1.8,0.12,1.86,1.15,0.01,">1 nonsynonymous","N107P P161S",2
"lib1","SARS-CoV-2","AGCCTGGTTACTCTTC",8,99.55,10.73,-0.03,0.05,2.88,1.08,0,">1 nonsynonymous","Y35L S41T T55Q",3
"lib1","SARS-CoV-2","AGCCTGTAAAACCAAA",3,17.29,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","C6W C49N F126Y I138V T201A",5
"lib1","SARS-CoV-2","AGCCTGTCCGCTATTT",8,24.52,6.88,-3.88,0.54,1.5,1.17,0.03,">1 nonsynonymous","I28M D97I C102D K114N N120P T140H",6
"lib1","SARS-CoV-2","AGCCTTAAATACACAC",3,17.39,6.17,-4.59,1.04,3,1.24,0.02,">1 nonsynonymous","D34N Y93N",2
"lib1","SARS-CoV-2","AGCCTTAATCCAACTT",1,27.05,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K94L R124M",2
"lib1","SARS-CoV-2","AGCCTTACAGCTTCAA",7,72.5,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R16I A89D N120E G174W",4
"lib1","SARS-CoV-2","AGCCTTACGCTTGAAC",2,14.09,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T46G G86C L125P P133I Y159R T201A",6
"lib1","SARS-CoV-2","AGCCTTAGTAAGAAAT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K R124T",2
"lib1","SARS-CoV-2","AGCCTTATAGATCCAC",5,18.64,9.94,-0.82,0.2,1.61,1.05,0.03,">1 nonsynonymous","T140K V173T",2
"lib1","SARS-CoV-2","AGCCTTATGATTCTCA",2,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S G51W T100Y P191C",4
"lib1","SARS-CoV-2","AGCCTTATTTTGTCCT",1,7.16,10.57,-0.19,0.04,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCCTTCCCAAGCGTT",7,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H A81Y D90M I104L P149S P177L E186F",7
"lib1","SARS-CoV-2","AGCCTTCCCGGGCACA",5,14.04,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S19A K56P V103S",3
"lib1","SARS-CoV-2","AGCCTTCCTAAAATAG",3,1.06,NA,NA,NA,NA,NA,NA,"stop","N92* S129L Y178H",3
"lib1","SARS-CoV-2","AGCCTTCTCAGTCACA",2,12.64,6.47,-4.3,0.64,1.5,1.16,0.03,">1 nonsynonymous","L38Y I88A",2
"lib1","SARS-CoV-2","AGCCTTCTGTCCGATA",3,50.19,10.28,-0.48,0.08,2.62,1,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","AGCCTTCTTGCTAGGG",1,56.69,9.77,-1,0.06,2,1.05,0,">1 nonsynonymous","T55D V77M W106L L188K",4
"lib1","SARS-CoV-2","AGCCTTGAGATTCAAA",7,2.8,NA,NA,NA,NA,NA,NA,"stop","L38* C61T W106R S184*",4
"lib1","SARS-CoV-2","AGCCTTGGAATAAATG",4,31.13,10.65,-0.12,0.09,2.86,1.06,0,">1 nonsynonymous","G9R R16W",2
"lib1","SARS-CoV-2","AGCCTTTAACGTCACA",12,383.59,9.44,-1.32,0.04,2.79,1.07,0,">1 nonsynonymous","F8I T170F",2
"lib1","SARS-CoV-2","AGCCTTTAGGGGCATG",1,31.1,10.35,-0.41,0.07,2.85,1,0,">1 nonsynonymous","Y39W G116W E154S",3
"lib1","SARS-CoV-2","AGCCTTTTCCACGGGA",7,44.48,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y91N L122M D137G G174E",4
"lib1","SARS-CoV-2","AGCGAAAAAAATAACA",2,20.3,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I28K L183H",2
"lib1","SARS-CoV-2","AGCGAAAACTTGTCCG",2,19.17,6,-4.76,1.11,1.5,1.15,0.02,">1 nonsynonymous","G155M L162K",2
"lib1","SARS-CoV-2","AGCGAAAAGATTGTAG",5,35.09,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","S45V L60H Y93V R136V Q168S",5
"lib1","SARS-CoV-2","AGCGAAACAAAAACCG",5,20.44,9.63,-1.13,0.34,1.5,1.06,0.04,">1 nonsynonymous","A33E K48S P133S",3
"lib1","SARS-CoV-2","AGCGAAACCACGAAAA",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K N120S F160N Q176R",4
"lib1","SARS-CoV-2","AGCGAAATTATTTTGG",1,38,10.81,0.05,0.09,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGAACAAACAGAAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N4D C61K P149*",3
"lib1","SARS-CoV-2","AGCGAACCCGGGGATA",11,141.34,10.48,-0.28,0.04,2.93,1.01,0,">1 nonsynonymous","N13K I28L",2
"lib1","SARS-CoV-2","AGCGAACGAATATACT",4,3.52,NA,NA,NA,NA,NA,NA,"stop","L60* T85A P149*",3
"lib1","SARS-CoV-2","AGCGAACGCCCGACAC",5,231.39,8.48,-2.29,0.15,1.8,1.17,0.01,">1 nonsynonymous","T148A P177C",2
"lib1","SARS-CoV-2","AGCGAACGTCAACAAA",2,44.03,10.61,-0.16,0.07,2.87,1,0,">1 nonsynonymous","D59G K128I F160K",3
"lib1","SARS-CoV-2","AGCGAACTTGAAAAGT",2,55.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I80V G86T L122P",3
"lib1","SARS-CoV-2","AGCGAACTTTTCAACA",1,30.15,10.75,-0.01,0.09,2.89,1.01,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","AGCGAAGAAAAATAAT",4,108.85,10.68,-0.08,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGAAGAAATATGCA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","T55D T63S K94D E154*",4
"lib1","SARS-CoV-2","AGCGAAGAGTAGAGAC",3,20.48,10.26,-0.5,0.13,2.82,1.04,0.01,">1 nonsynonymous","T46N D90S",2
"lib1","SARS-CoV-2","AGCGAAGCTACTCACT",5,80.54,10.71,-0.06,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGAAGGCACTCGGC",2,21.92,10.27,-0.5,0.13,2.89,1,0,">1 nonsynonymous","S41K T100W",2
"lib1","SARS-CoV-2","AGCGAAGTTGGATTAC",3,109.83,10.16,-0.61,0.05,2.76,1.03,0,">1 nonsynonymous","A42V D90H T100K",3
"lib1","SARS-CoV-2","AGCGAATAACAGACAG",1,70.45,9.88,-0.88,0.07,2.82,1.11,0,">1 nonsynonymous","K87Y N120R Y143L V173L",4
"lib1","SARS-CoV-2","AGCGAATAGTGACACG",6,112.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3P C158Y V173A T201V",4
"lib1","SARS-CoV-2","AGCGAATATGTCAGAC",7,122.91,10.77,0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGAATCAACGACCG",4,62.02,10.31,-0.46,0.06,2.92,1.01,0,">1 nonsynonymous","V11L L95M",2
"lib1","SARS-CoV-2","AGCGAATCTTCGTAAA",5,57.23,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V77F G146C E154T E186D",4
"lib1","SARS-CoV-2","AGCGAATGTGAAAAAA",3,19.78,6.98,-3.79,0.56,1.5,1.13,0.07,">1 nonsynonymous","L5W F12N K56P L95H",4
"lib1","SARS-CoV-2","AGCGAATTATAAGAGG",1,7.03,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","R16M L95R Q168E",3
"lib1","SARS-CoV-2","AGCGACAAAAAAATAC",2,6.28,10.69,-0.07,0.22,2.83,1.1,0.02,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","AGCGACAATATGGGAC",4,42.14,10.59,-0.18,0.05,2.88,1.06,0,">1 nonsynonymous","C61F V153S",2
"lib1","SARS-CoV-2","AGCGACAATCATGGAT",3,14.21,6,-4.76,1.22,1.5,1.18,0.04,">1 nonsynonymous","S19L K128G G174M",3
"lib1","SARS-CoV-2","AGCGACAATCCGCAAA",7,50.11,6.41,-4.36,0.49,1.5,1.15,0.02,">1 nonsynonymous","T15L R124H G152D",3
"lib1","SARS-CoV-2","AGCGACAGACAAAGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","K87D K132*",2
"lib1","SARS-CoV-2","AGCGACAGATAGTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F17L S36* D68R L95H Y119T",5
"lib1","SARS-CoV-2","AGCGACAGGACAGTTA",2,81.2,8.72,-2.04,0.08,2.92,1.08,0,">1 nonsynonymous","V65I Y159L K198A",3
"lib1","SARS-CoV-2","AGCGACCCTCAACACC",3,33.75,9.22,-1.55,0.14,2.84,1.16,0.01,">1 nonsynonymous","K56S Y119D",2
"lib1","SARS-CoV-2","AGCGACGGGATTGCCT",11,228.84,7.15,-3.61,0.11,1.8,1.14,0,"1 nonsynonymous","C150D",1
"lib1","SARS-CoV-2","AGCGACTAACTGTATT",14,1.15,NA,NA,NA,NA,NA,NA,"stop","L122K E135*",2
"lib1","SARS-CoV-2","AGCGACTACAGTGTAA",6,51.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44G D112L N118S",3
"lib1","SARS-CoV-2","AGCGACTACATAAAGG",4,23.87,7.2,-3.56,0.22,1.5,1.15,0.01,">1 nonsynonymous","I2T G51V D59V K87I E186T",5
"lib1","SARS-CoV-2","AGCGACTATACTCCTG",16,102.42,8.54,-2.22,0.28,1.5,1.04,0.02,">1 nonsynonymous","P82I L95M",2
"lib1","SARS-CoV-2","AGCGACTGAAAGCTGT",3,15.67,10.87,0.1,0.12,2.92,1.05,0.01,">1 nonsynonymous","E141N A190D",2
"lib1","SARS-CoV-2","AGCGACTGGCTCTATC",1,26.14,10.78,0.01,0.05,2.92,1.02,0,">1 nonsynonymous","L5D I138S K199L",3
"lib1","SARS-CoV-2","AGCGAGAAAACTCATT",1,54.32,10.46,-0.3,0.05,2.89,1.05,0,">1 nonsynonymous","I2N V37D T140R G174P",4
"lib1","SARS-CoV-2","AGCGAGAAGCGCTTGT",4,24.54,6,-4.76,1.99,3,1.11,0.01,">1 nonsynonymous","N92L S139R N151T",3
"lib1","SARS-CoV-2","AGCGAGACCCACAAAA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","L60A Y93R F99* S129L S200N",5
"lib1","SARS-CoV-2","AGCGAGAGTACGCAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D C6Y V52D V103N Y119I R127D",6
"lib1","SARS-CoV-2","AGCGAGATTACCCAAG",8,46.59,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","E10R G101S",2
"lib1","SARS-CoV-2","AGCGAGCAATTCCCCT",1,27.21,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G9M Q176Y",2
"lib1","SARS-CoV-2","AGCGAGCTAAACGATT",5,44.63,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S53K V71D K114N T148S P169T",5
"lib1","SARS-CoV-2","AGCGAGCTGTGGGAGG",3,126.96,8.05,-2.72,0.18,2.12,1.13,0.01,">1 nonsynonymous","G117E L125P",2
"lib1","SARS-CoV-2","AGCGAGCTTTTTCGCA",3,8.37,6.07,-4.7,1.03,1.5,1.14,0.03,">1 nonsynonymous","I104E G116K I142E",3
"lib1","SARS-CoV-2","AGCGAGGACAACATAT",1,13.89,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","K128F F134N P177N",3
"lib1","SARS-CoV-2","AGCGAGGATAACAACG",1,20.99,6,-4.76,1.55,1.5,1.09,0,">1 nonsynonymous","L5K D59T I88F T100I Y143D G155I",6
"lib1","SARS-CoV-2","AGCGATAACTAACACA",6,179,10.8,0.04,0.05,2.9,1.05,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","AGCGATAACTAACCCC",5,85.62,9.3,-1.46,0.13,1.73,1.1,0.01,">1 nonsynonymous","V11G D59R",2
"lib1","SARS-CoV-2","AGCGATAATCCAGCCG",3,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N P96H Y159K",3
"lib1","SARS-CoV-2","AGCGATACGAGCGTCC",4,2,NA,NA,NA,NA,NA,NA,"stop","T3P A14S D98* G116K",4
"lib1","SARS-CoV-2","AGCGATACGCCCGCTA",14,316.71,10.79,0.02,0.05,2.92,1.05,0,">1 nonsynonymous","S43M I138M",2
"lib1","SARS-CoV-2","AGCGATACTATCTCTT",1,9.68,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N24R I72R N107D G146M G174F",5
"lib1","SARS-CoV-2","AGCGATATCCAGAAGA",4,55.12,6.38,-4.38,0.54,1.5,1.24,0.02,">1 nonsynonymous","F8T K94M",2
"lib1","SARS-CoV-2","AGCGATCATTACCAAA",9,48.38,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","F12T K56F R73K L95F R136T",5
"lib1","SARS-CoV-2","AGCGATCGAAAGACAG",3,19.64,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F47D R73I L183A",3
"lib1","SARS-CoV-2","AGCGATCGATAAATGA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C A105C T201M",3
"lib1","SARS-CoV-2","AGCGATGAAACTACTA",2,54.84,7.19,-3.58,0.44,1.5,1.14,0.04,">1 nonsynonymous","V37N D90M T100S N130M R179F",5
"lib1","SARS-CoV-2","AGCGATGGTCCGTGCT",2,41.13,10.49,-0.27,0.07,2.87,1,0,">1 nonsynonymous","T3R S41K T85N",3
"lib1","SARS-CoV-2","AGCGATTAGCAGTGCT",6,114.04,9.91,-0.86,0.09,1.93,1.1,0,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","AGCGATTAGTCTTCCA",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N G101D L125M",3
"lib1","SARS-CoV-2","AGCGATTGAGATTTCT",6,104.94,10.75,-0.02,0.05,2.93,1.04,0,">1 nonsynonymous","K132E K198M",2
"lib1","SARS-CoV-2","AGCGATTTAATATGCT",6,51.32,10.57,-0.2,0.04,2.93,1.04,0,">1 nonsynonymous","S29T E135T",2
"lib1","SARS-CoV-2","AGCGATTTAATGCAAG",4,94.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35L N92L S139C",3
"lib1","SARS-CoV-2","AGCGCAAAAGTAAAAA",6,128.34,9.64,-1.12,0.1,2.54,1.06,0,">1 nonsynonymous","Y35Q T148C",2
"lib1","SARS-CoV-2","AGCGCAAGCTGATGCA",2,66.61,10.24,-0.53,0.08,2.73,1.03,0,"1 nonsynonymous","V52N",1
"lib1","SARS-CoV-2","AGCGCAATAAATTATC",3,2.89,NA,NA,NA,NA,NA,NA,"stop","A67D P96* S113G Y119Q G152R",5
"lib1","SARS-CoV-2","AGCGCAATAGTTTAAT",9,232.43,10.63,-0.14,0.03,2.91,1.04,0,"1 nonsynonymous","R78C",1
"lib1","SARS-CoV-2","AGCGCACAACGAGGAG",6,53.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11L L38H D90I S129N C150S S164K",6
"lib1","SARS-CoV-2","AGCGCACCAAAACCAT",2,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98H P149E F185K",3
"lib1","SARS-CoV-2","AGCGCACCCAACGATA",1,15.08,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I80T V103R T201N",3
"lib1","SARS-CoV-2","AGCGCACCTCCCGCCG",4,37.39,9.6,-1.16,0.14,1.83,1.1,0.01,">1 nonsynonymous","Y39G R127A T140L",3
"lib1","SARS-CoV-2","AGCGCACTAATCTGCT",2,38.61,10.71,-0.06,0.09,2.9,1.07,0,">1 nonsynonymous","V65I Q144N",2
"lib1","SARS-CoV-2","AGCGCACTATTCATCG",3,15.8,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6S R25W D98A Y119H C158S",5
"lib1","SARS-CoV-2","AGCGCACTCGGTAGCT",14,104.03,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4F Y50C S139T C158L",4
"lib1","SARS-CoV-2","AGCGCAGAATAACATA",3,71.11,10.67,-0.1,0.07,2.83,1.12,0,"1 nonsynonymous","G196V",1
"lib1","SARS-CoV-2","AGCGCAGGATTTGCTG",5,38.97,10.23,-0.54,0.03,2.94,1.02,0,">1 nonsynonymous","S41R G155C P197A",3
"lib1","SARS-CoV-2","AGCGCAGGGAGTACTT",1,12.92,10.77,0.01,0.1,2.9,1.03,0.01,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","AGCGCATCTTACACGG",1,69.07,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V77G K87D Y143C Q176R",4
"lib1","SARS-CoV-2","AGCGCATGGATGCTAA",6,118.74,10.71,-0.05,0.04,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCGCATGGCAATCCC",1,14.62,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","F12G T85M L131S T201Y",4
"lib1","SARS-CoV-2","AGCGCATTGTGTCATT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Y91L V103* G152Y F160A",4
"lib1","SARS-CoV-2","AGCGCATTTGAAGTCT",4,42.3,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","C6Q V11T N40S F70E K87F Y91F S129H",7
"lib1","SARS-CoV-2","AGCGCCAAACTGTCTG",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G G51R G86P Y119M S139I",5
"lib1","SARS-CoV-2","AGCGCCAACCACGACA",1,17.01,6,-4.76,2,3,1.05,0,">1 nonsynonymous","V20D V52I L122R R136K P169M",5
"lib1","SARS-CoV-2","AGCGCCACCAACTACC",3,61.68,10.67,-0.09,0.05,2.88,1.07,0,">1 nonsynonymous","L60F S147T F160S",3
"lib1","SARS-CoV-2","AGCGCCACTTAGAACA",2,34.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4S I28E V77S G83D D90Y Y123F",6
"lib1","SARS-CoV-2","AGCGCCAGCCTAGAAT",3,95.48,8.87,-1.89,0.08,2.34,1.11,0,"1 nonsynonymous","Y165V",1
"lib1","SARS-CoV-2","AGCGCCATATACGTCT",2,102.15,10.76,-0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGCCCACAACGGAG",2,7.15,10.68,-0.09,0.14,3,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCGCCCAGGAATTAT",1,8.54,8.76,-2,0.21,2.83,1.14,0.02,">1 nonsynonymous","A22M V32R G83Q F156G",4
"lib1","SARS-CoV-2","AGCGCCCCAGGGGGTA",6,20.2,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F47D G86S N107S Y119E G174W",5
"lib1","SARS-CoV-2","AGCGCCCCCAACTCGC",3,0.6,NA,NA,NA,NA,NA,NA,"stop","R27Q F99K S139A S200*",4
"lib1","SARS-CoV-2","AGCGCCCCTAAGATGC",8,144.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17N N151C",2
"lib1","SARS-CoV-2","AGCGCCCTACATAACC",4,60.44,10.19,-0.58,0.05,2.85,1.01,0,">1 nonsynonymous","Y35V R78V T85F T201E",4
"lib1","SARS-CoV-2","AGCGCCGACAAAGAAG",7,61.58,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P54T R73I I104P",3
"lib1","SARS-CoV-2","AGCGCCGAGGGCCCAT",2,54.7,10.9,0.14,0.07,2.92,1.04,0,"1 nonsynonymous","L60Y",1
"lib1","SARS-CoV-2","AGCGCGACTGCAAAAA",11,1.65,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","AGCGCGCGAAGGAAGC",12,130.46,9.9,-0.87,0.08,2.02,1.07,0,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","AGCGCGGAATTTCAAT",1,16.77,6,-4.76,2,3,1.19,0,">1 nonsynonymous","N30S V52K I88S I104D F167W",5
"lib1","SARS-CoV-2","AGCGCGTAGTCATGTT",2,12.06,6.84,-3.93,0.51,1.5,1.25,0.04,">1 nonsynonymous","I2D A81V W106T",3
"lib1","SARS-CoV-2","AGCGCGTGGAAAATGG",3,24.14,6.29,-4.48,0.83,1.5,1.22,0.04,">1 nonsynonymous","N40L D98S S113L",3
"lib1","SARS-CoV-2","AGCGCTAAACTATTCA",10,39.78,9.47,-1.3,0.12,1.98,1.05,0.01,">1 nonsynonymous","T55G Q84L N107A",3
"lib1","SARS-CoV-2","AGCGCTAAAGTAATGG",2,16.41,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y50F Y91T D112V Q144R P149R",5
"lib1","SARS-CoV-2","AGCGCTACAGACTCAA",1,24.24,10.25,-0.51,0.11,2.74,1.12,0.01,">1 nonsynonymous","L60R F156L",2
"lib1","SARS-CoV-2","AGCGCTACTCCCATGG",9,2.33,NA,NA,NA,NA,NA,NA,"stop","N30* C61N V103W S147P N151Y",5
"lib1","SARS-CoV-2","AGCGCTACTCGACTAG",3,27.69,8.65,-2.11,0.13,2.55,1.04,0.01,">1 nonsynonymous","Y119T S139F A190S",3
"lib1","SARS-CoV-2","AGCGCTAGTAACGGTT",8,65.82,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","P82C K114L E154C",3
"lib1","SARS-CoV-2","AGCGCTAGTCCATGGC",1,45.26,10.71,-0.05,0.07,2.87,1.06,0,">1 nonsynonymous","G83R T201Y",2
"lib1","SARS-CoV-2","AGCGCTATGAAGATTA",4,164.51,10.72,-0.04,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGCTATGGAAAATC",2,24.91,10.61,-0.15,0.08,2.87,1.05,0,">1 nonsynonymous","K56G D90R",2
"lib1","SARS-CoV-2","AGCGCTATTTAAAGGT",1,24.26,10.63,-0.14,0.08,2.88,1.05,0,">1 nonsynonymous","N58D L131M",2
"lib1","SARS-CoV-2","AGCGCTCATGTGGAAA",3,41.18,10.27,-0.49,0.05,2.9,1.04,0,">1 nonsynonymous","T3G N58Y",2
"lib1","SARS-CoV-2","AGCGCTCTTTAAACAT",3,34.28,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I2N L38Q S43Y F99A I138A",5
"lib1","SARS-CoV-2","AGCGCTGACCAGTTAA",5,183.65,9.6,-1.16,0.04,2.8,1.06,0,">1 nonsynonymous","R16L T55H T63L L125P",4
"lib1","SARS-CoV-2","AGCGCTTAAACATAAG",6,1163.55,10.71,-0.05,0.05,2.93,1.04,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","AGCGCTTAACCCCCCG",1,19.19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81D Y175L",2
"lib1","SARS-CoV-2","AGCGCTTACACCTAAA",12,195.15,10.76,-0.01,0.04,2.93,1.03,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","AGCGCTTATCCATTCC",4,69.49,6.9,-3.86,0.28,1.5,1.16,0.02,">1 nonsynonymous","C6N G117H E141G",3
"lib1","SARS-CoV-2","AGCGGAAAAAGAGGCT",13,159.76,9.93,-0.83,0.07,2.22,1.03,0,">1 nonsynonymous","S45F S184I",2
"lib1","SARS-CoV-2","AGCGGAAATTCCATAA",3,66.94,10.75,-0.01,0.08,2.95,1.02,0,"1 nonsynonymous","L187F",1
"lib1","SARS-CoV-2","AGCGGAACCGTTGCAA",4,65.56,9.9,-0.87,0.11,1.92,1.14,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","AGCGGAACTACTAGAC",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47H T85C",2
"lib1","SARS-CoV-2","AGCGGAAGGTAAAAAA",7,67.76,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","I2R I28Q S41K K56P D97P P149S E154I Y159L Y178K",9
"lib1","SARS-CoV-2","AGCGGAAGTAAATGAC",3,103.8,10.69,-0.07,0.07,2.93,1.05,0,"1 nonsynonymous","Q168A",1
"lib1","SARS-CoV-2","AGCGGAATCAACAAAG",4,116.23,10.64,-0.13,0.05,2.92,1.05,0,">1 nonsynonymous","I2N S41T",2
"lib1","SARS-CoV-2","AGCGGACAAATTCCAA",7,110.1,9.21,-1.55,0.09,1.8,1.1,0,">1 nonsynonymous","I28L S69V G152N",3
"lib1","SARS-CoV-2","AGCGGACGCCTCTGAC",2,8.33,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C49A D59S G74V P149G T170Y",5
"lib1","SARS-CoV-2","AGCGGAGAACAAAGAA",6,207.15,9.97,-0.79,0.05,2.72,1.04,0,">1 nonsynonymous","S139V Y175F",2
"lib1","SARS-CoV-2","AGCGGAGCCCTTACCA",6,53.45,9.88,-0.88,0.11,1.91,1.07,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","AGCGGAGGAGTGGACG",6,165.81,10.59,-0.17,0.05,2.87,1.06,0,"1 nonsynonymous","V32C",1
"lib1","SARS-CoV-2","AGCGGAGGGAATAGTT",4,88.97,10.51,-0.26,0.07,2.95,1,0,">1 nonsynonymous","L5D T100Y S139T G174R",4
"lib1","SARS-CoV-2","AGCGGAGGGACTACCG",5,455.6,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","T85K Y91S N120S D137L",4
"lib1","SARS-CoV-2","AGCGGATACGAACACA",6,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R F70E W106T T140S",4
"lib1","SARS-CoV-2","AGCGGATACGCTACCA",5,58.11,6.77,-3.99,0.27,1.5,1.13,0.01,">1 nonsynonymous","A14E S45T K128F S129R I142S",5
"lib1","SARS-CoV-2","AGCGGATAGAGAGGCA",1,7.03,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","G86A V103A R136P",3
"lib1","SARS-CoV-2","AGCGGATTAAAGTAAC",2,35.87,7.35,-3.41,0.24,1.5,1.07,0.01,">1 nonsynonymous","P82F Y121R",2
"lib1","SARS-CoV-2","AGCGGATTACACCCTT",5,55.63,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","N64C N107I S129K E135R E154A",5
"lib1","SARS-CoV-2","AGCGGCACTACGACAT",6,84.6,10.64,-0.12,0.07,2.92,1.05,0,">1 nonsynonymous","F134Y G152S",2
"lib1","SARS-CoV-2","AGCGGCACTTCTCGAC",1,48.18,10.8,0.04,0.1,2.83,1.07,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","AGCGGCATCAAGCCCA",1,10.02,6.4,-4.37,2,1.5,1.14,0.06,">1 nonsynonymous","T63N D90V I104S Y119G F167V",5
"lib1","SARS-CoV-2","AGCGGCATCTATCTCC",3,81.46,10.58,-0.18,0.06,2.97,1,0,"1 nonsynonymous","G116I",1
"lib1","SARS-CoV-2","AGCGGCCAAGGACGAA",1,18.88,7.81,-2.95,0.26,1.55,1.14,0.02,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","AGCGGCCAATGGTGCA",2,10.7,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","I80K T100A G155P",3
"lib1","SARS-CoV-2","AGCGGCCCAGGGAAGT",5,10.79,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G51L D59R Q176K",3
"lib1","SARS-CoV-2","AGCGGCCTCTCTCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61R Y175*",2
"lib1","SARS-CoV-2","AGCGGCGAGACAAGCG",3,19.92,9.95,-0.82,0.11,2.43,1.03,0.01,">1 nonsynonymous","N1F A14V",2
"lib1","SARS-CoV-2","AGCGGCTAAACCGTGT",1,30.89,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","G9M C61Y L95M V103T I138M G146D",6
"lib1","SARS-CoV-2","AGCGGCTACAATGTGT",2,10.14,10.65,-0.11,0.08,2.99,1,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","AGCGGCTGGCTAGATA",9,166.41,10.14,-0.63,0.06,2.73,1.01,0,">1 nonsynonymous","C61L K128E L183V K199A",4
"lib1","SARS-CoV-2","AGCGGGAAAGTACGGG",3,16.12,8.49,-2.28,0.33,1.73,1.04,0.05,">1 nonsynonymous","C6K D59S Q144V",3
"lib1","SARS-CoV-2","AGCGGGACCGGACTCA",12,1.76,NA,NA,NA,NA,NA,NA,"stop","T3* S43L P82M",3
"lib1","SARS-CoV-2","AGCGGGCCAATTACTA",12,119.19,9.6,-1.17,0.09,1.86,1.11,0,">1 nonsynonymous","F8S Q84M E186S",3
"lib1","SARS-CoV-2","AGCGGGGCGCAATACT",2,58.27,10.74,-0.02,0.07,2.94,1.05,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","AGCGGGGGTACATCAA",3,16.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84I N92S F99S",3
"lib1","SARS-CoV-2","AGCGGGTATCCCACAT",16,129.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D90H W106F K132W I142K",4
"lib1","SARS-CoV-2","AGCGGGTCTTGAGCAC",2,23,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L95T F99H S113M Y119Q R136I V173F",6
"lib1","SARS-CoV-2","AGCGGGTTAAGAGGCC",5,104.46,10.58,-0.19,0.03,2.97,1,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","AGCGGTAAGACGGATT",2,37.17,10.22,-0.55,0.1,2.66,1,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","AGCGGTACTGGAAATG",3,5.12,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D98L V103R L122N",3
"lib1","SARS-CoV-2","AGCGGTAGTTACCTAC",2,22.58,9.88,-0.88,0.14,2.19,1.08,0.01,">1 nonsynonymous","D90G P149Y",2
"lib1","SARS-CoV-2","AGCGGTCACATTAAAA",7,129.47,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G74V G86H W106G K128I Q176M",5
"lib1","SARS-CoV-2","AGCGGTCACTAGCGAA",2,16.35,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D68R D90S",2
"lib1","SARS-CoV-2","AGCGGTCCAAATTACT",1,6.66,10.77,0.01,0.17,2.7,1.25,0.01,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","AGCGGTCGAGAATGGA",2,6.02,10.13,-0.63,0.28,3,1.06,0.02,">1 nonsynonymous","N120S K199P",2
"lib1","SARS-CoV-2","AGCGGTCGCCGCGGGG",4,124.57,10.72,-0.05,0.05,2.91,1.05,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","AGCGGTGATTTTACGT",9,175.65,8.6,-2.16,0.1,2.99,1.04,0,">1 nonsynonymous","Y119V A145I F160Y",3
"lib1","SARS-CoV-2","AGCGGTGGTATCTAGA",1,5.78,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","L5V F44S P54S F99L F167C",5
"lib1","SARS-CoV-2","AGCGGTTGAACAAAAT",1,165.29,10.17,-0.6,0.06,2.65,1.01,0,">1 nonsynonymous","L5I V173S",2
"lib1","SARS-CoV-2","AGCGGTTGACCTAAAA",5,1.79,NA,NA,NA,NA,NA,NA,"stop","L5Q N110* Y143S G172L",4
"lib1","SARS-CoV-2","AGCGTAAACATCATCA",4,60.03,10.26,-0.5,0.06,2.91,1.02,0,">1 nonsynonymous","V37K S147T G152I",3
"lib1","SARS-CoV-2","AGCGTAAAGAAAACTA",4,227.45,9.99,-0.77,0.07,2.49,1.01,0,">1 nonsynonymous","G51R K87F R127K",3
"lib1","SARS-CoV-2","AGCGTAAAGAGAACTA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","Y35R F47D D90L G116S R127A R136*",6
"lib1","SARS-CoV-2","AGCGTAAAGGAAACAA",1,40.69,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35R K87I D98G D112Q",4
"lib1","SARS-CoV-2","AGCGTAACAAGATTGT",8,2.62,NA,NA,NA,NA,NA,NA,"stop","F12* P96R E154S K199P",4
"lib1","SARS-CoV-2","AGCGTAACTAAGTATG",3,0,NA,NA,NA,NA,NA,NA,"stop","L60* D97M N120F L162A",4
"lib1","SARS-CoV-2","AGCGTAAGAAGTTATC",6,157.65,10.67,-0.1,0.04,2.89,1.05,0,"1 nonsynonymous","S19P",1
"lib1","SARS-CoV-2","AGCGTAAGAGTACTTA",1,2.91,NA,NA,NA,NA,NA,NA,"stop","N64E R127H A190*",3
"lib1","SARS-CoV-2","AGCGTAATGATATAAA",9,32.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41N S53R D97K C102Y",4
"lib1","SARS-CoV-2","AGCGTAATTGGTCAAT",4,61.29,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C31L S69K C150F Y178F",4
"lib1","SARS-CoV-2","AGCGTACAAAAGACGT",1,53.98,10.32,-0.45,0.09,2.62,1.03,0,">1 nonsynonymous","A81K N151M",2
"lib1","SARS-CoV-2","AGCGTACCACTTGTAG",3,19.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L Y123L G146F",3
"lib1","SARS-CoV-2","AGCGTACTACAGCGCA",6,0.62,NA,NA,NA,NA,NA,NA,"stop","L57W C150*",2
"lib1","SARS-CoV-2","AGCGTAGCCAGACACC",4,0.61,NA,NA,NA,NA,NA,NA,"stop","A89* T201E",2
"lib1","SARS-CoV-2","AGCGTAGCTCCCAATT",4,4.22,NA,NA,NA,NA,NA,NA,"stop","S19* G116F",2
"lib1","SARS-CoV-2","AGCGTAGGAAATTTAT",8,75.78,10.59,-0.18,0.06,2.78,1.04,0,">1 nonsynonymous","P7N A14H T201K",3
"lib1","SARS-CoV-2","AGCGTATAAGGTCGAC",2,78.83,10.58,-0.19,0.04,2.88,1.05,0,">1 nonsynonymous","T63L D98E",2
"lib1","SARS-CoV-2","AGCGTATACCCCTCGA",4,35.63,10.77,0,0.08,2.89,1.06,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","AGCGTATCGGTTAACA",1,116.71,9.6,-1.17,0.05,2.86,1.08,0,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","AGCGTATCTAGACTAG",2,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T I88T F99R S139C",4
"lib1","SARS-CoV-2","AGCGTCAAAAAAAATA",8,75.77,9.68,-1.08,0.12,2.24,1.08,0.01,">1 nonsynonymous","V32M P133S Q144P",3
"lib1","SARS-CoV-2","AGCGTCAGGTTCCCCG",4,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20P Y93V C158S",3
"lib1","SARS-CoV-2","AGCGTCATATGATAGG",3,26.57,8.34,-2.43,0.26,1.7,1.06,0.03,">1 nonsynonymous","I28T T100M F126Y L188M",4
"lib1","SARS-CoV-2","AGCGTCCCAAGACTTC",6,29.56,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44V L122N P149S C158G",4
"lib1","SARS-CoV-2","AGCGTCCTAAGCAGAG",4,34.88,6,-4.76,1.5,1.5,1.25,0.02,"1 nonsynonymous","Y93G",1
"lib1","SARS-CoV-2","AGCGTCCTATTACCCT",13,6.64,NA,NA,NA,NA,NA,NA,"stop","R16G L38* N64T N120V C158Q L183*",6
"lib1","SARS-CoV-2","AGCGTCTATACGACAA",7,59.81,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","T15L V52F C158V",3
"lib1","SARS-CoV-2","AGCGTCTTCTATAATA",3,20.92,10.87,0.11,0.11,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCGTGAATTTAATTC",1,31.68,9.75,-1.01,0.22,1.63,1.15,0.02,">1 nonsynonymous","F12Q D59S P149A T201A",4
"lib1","SARS-CoV-2","AGCGTGACTCATTCTT",1,18.92,10.11,-0.65,0.07,2.84,1.11,0,">1 nonsynonymous","R16Y S45A N110M A190R",4
"lib1","SARS-CoV-2","AGCGTGAGGTACCCCA",16,100.59,10.66,-0.11,0.05,2.91,1.05,0,">1 nonsynonymous","S29E D98E",2
"lib1","SARS-CoV-2","AGCGTGATCAATATTG",6,111.39,6.24,-4.53,0.57,1.5,1.15,0.01,">1 nonsynonymous","A14T Y35T G146C",3
"lib1","SARS-CoV-2","AGCGTGCAAAAACAAC",4,48.46,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S43I L60A I138V G172N G196Q",5
"lib1","SARS-CoV-2","AGCGTGCATAATAAAT",5,92.54,10.01,-0.76,0.04,2.81,1.01,0,">1 nonsynonymous","G9L C31E",2
"lib1","SARS-CoV-2","AGCGTGCTTACACCGC",3,11.81,10.06,-0.7,0.23,2.44,1.05,0.02,">1 nonsynonymous","C6L E141H",2
"lib1","SARS-CoV-2","AGCGTGGTACACTACA",7,160.99,9.93,-0.83,0.12,2.08,1.04,0.01,">1 nonsynonymous","S29M K132R F167Y",3
"lib1","SARS-CoV-2","AGCGTGTACTCCGCGA",2,84.3,6.27,-4.5,0.39,1.5,1.16,0.01,">1 nonsynonymous","L57T Y175D T201P",3
"lib1","SARS-CoV-2","AGCGTGTCTATCCCAT",2,1.94,NA,NA,NA,NA,NA,NA,"stop","D68V Y91* G146I",3
"lib1","SARS-CoV-2","AGCGTGTGAAGCACAC",8,37.46,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y50L T85P Y121C F156L",4
"lib1","SARS-CoV-2","AGCGTGTTAGCCCTTT",1,18.9,8.94,-1.82,0.16,2.3,1.12,0.01,">1 nonsynonymous","Y91R G174R",2
"lib1","SARS-CoV-2","AGCGTTATATGCAGTT",1,11.13,9.23,-1.53,0.38,1.66,1.11,0.05,">1 nonsynonymous","K87T L95A",2
"lib1","SARS-CoV-2","AGCGTTATGCATATTA",7,1.5,NA,NA,NA,NA,NA,NA,"stop","T15M K48* Y119*",3
"lib1","SARS-CoV-2","AGCGTTATTACCTGAA",1,5.85,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2H K114S Y165G",3
"lib1","SARS-CoV-2","AGCGTTCACTACAATG",10,1.54,NA,NA,NA,NA,NA,NA,"stop","F47V L122V T140*",3
"lib1","SARS-CoV-2","AGCGTTCAGTGAAAAC",1,21.56,9.62,-1.14,0.1,2.73,1.08,0,">1 nonsynonymous","V11F F62L A145V",3
"lib1","SARS-CoV-2","AGCGTTCTTAATACTT",12,68.79,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","C6A V11C S41P L60E G152V",5
"lib1","SARS-CoV-2","AGCGTTGATAAATTAT",4,24.88,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y50D G117L I142F",3
"lib1","SARS-CoV-2","AGCGTTGGCTGATTAA",3,26.3,6,-4.76,0.49,1.5,1.08,0,">1 nonsynonymous","L5H C31M Y91C G166L",4
"lib1","SARS-CoV-2","AGCGTTGTAAGAAACC",4,0.94,NA,NA,NA,NA,NA,NA,"stop","T3K C61S E135*",3
"lib1","SARS-CoV-2","AGCGTTGTAAGGCGGC",1,81.1,10.45,-0.32,0.05,2.89,1.06,0,"1 nonsynonymous","P133E",1
"lib1","SARS-CoV-2","AGCGTTTACAAAAGAT",2,19.41,10.7,-0.07,0.05,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCGTTTACAGTAGCA",1,21.35,6.1,-4.67,1.59,1.5,1.13,0.03,">1 nonsynonymous","L95W V173K",2
"lib1","SARS-CoV-2","AGCGTTTATAGTGTAA",6,94.66,10.75,-0.01,0.06,2.85,1.09,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","AGCGTTTGGCCCTACT",1,5.15,NA,NA,NA,NA,NA,NA,"stop","W106* Q144E",2
"lib1","SARS-CoV-2","AGCGTTTTATAGAACT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","A42S C61* A89T R127K S200H",5
"lib1","SARS-CoV-2","AGCGTTTTTGTCATGT",2,8.63,6.94,-3.83,0.4,2,1.23,0.02,">1 nonsynonymous","C61F W106M Y119L K198S",4
"lib1","SARS-CoV-2","AGCTAAAAAAACTCAT",2,15.27,10.2,-0.57,0.09,2.84,1.02,0,">1 nonsynonymous","N13G V32R S43N N64Q H189Y",5
"lib1","SARS-CoV-2","AGCTAAAAACATTTCG",5,13.9,8.53,-2.23,0.33,1.69,1.2,0.05,">1 nonsynonymous","A42P Q84N I142F P149C T201S",5
"lib1","SARS-CoV-2","AGCTAAAAAGCACGAC",1,15.03,6,-4.76,2,3,1.2,0,">1 nonsynonymous","N4P Y39C V52K G166P V173F",5
"lib1","SARS-CoV-2","AGCTAAAACCAAACGG",4,0.13,NA,NA,NA,NA,NA,NA,"stop","D98N V173S A190*",3
"lib1","SARS-CoV-2","AGCTAAAACCGACGCA",1,6.8,10.02,-0.74,0.21,2.07,1.07,0.01,">1 nonsynonymous","C49V T201G",2
"lib1","SARS-CoV-2","AGCTAAAACTATTAAG",6,63.73,9.75,-1.01,0.08,2.01,1.06,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","AGCTAAAATTCGCGAT",3,28.28,6.15,-4.62,0.8,1.5,1.25,0.03,">1 nonsynonymous","T15I I72K Y119L N157A",4
"lib1","SARS-CoV-2","AGCTAAACACAATCTT",2,47.42,9.43,-1.34,0.25,1.5,1,0.04,">1 nonsynonymous","S41M D59Q R127L",3
"lib1","SARS-CoV-2","AGCTAAACATGCCAGC",3,16.18,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","L38P F44C Q168V",3
"lib1","SARS-CoV-2","AGCTAAACCAAATGAC",7,60.02,10.71,-0.05,0.09,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTAAACGTTGTGTT",1,22.73,10.68,-0.08,0.08,2.96,1.04,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","AGCTAAACTATAATAA",1,15.54,6.95,-3.81,0.26,1.5,1.12,0.04,">1 nonsynonymous","N13L A105I",2
"lib1","SARS-CoV-2","AGCTAAACTTTGACTC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T3P L57C A67V D98S E154*",5
"lib1","SARS-CoV-2","AGCTAAAGAAACGTAT",6,55.31,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","K94F C158M",2
"lib1","SARS-CoV-2","AGCTAAAGCGAAATGT",2,11.54,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S129C I142S Y165T",3
"lib1","SARS-CoV-2","AGCTAAAGGTATTACC",5,59.2,10.14,-0.62,0.15,2.05,1.02,0.02,">1 nonsynonymous","D97T Q163P",2
"lib1","SARS-CoV-2","AGCTAAAGTTAACTTA",4,34.46,10.78,0.01,0.1,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTAAATAAATAAAC",3,31.51,10.56,-0.2,0.06,2.96,1,0,">1 nonsynonymous","N40K G146S N151T T201A",4
"lib1","SARS-CoV-2","AGCTAAATAGGAACCC",2,9.18,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","G51F F99S N130K",3
"lib1","SARS-CoV-2","AGCTAAATGTCAAAAA",1,29.07,8.49,-2.28,0.24,1.5,1.17,0.02,">1 nonsynonymous","F17K S41P T201K",3
"lib1","SARS-CoV-2","AGCTAACAAAGAATTT",2,85.38,9.33,-1.44,0.06,2.86,1.11,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","AGCTAACAAGACTACG",1,22.65,10.73,-0.03,0.09,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTAACAAGCCCACA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","N30K C61T R136D G174*",4
"lib1","SARS-CoV-2","AGCTAACACTAAACCC",5,25.23,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C6A V20A Y35P D98I",4
"lib1","SARS-CoV-2","AGCTAACACTAGGAAT",5,28.37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89G P96D G101P Y159L",4
"lib1","SARS-CoV-2","AGCTAACAGAACTTAA",4,69.39,10.75,-0.01,0.09,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTAACATGTATTAG",2,18.28,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","S43F C49R G172N",3
"lib1","SARS-CoV-2","AGCTAACCAGCTGATA",3,6.51,NA,NA,NA,NA,NA,NA,"stop","F47D Y50N T55* F156R",4
"lib1","SARS-CoV-2","AGCTAACCATGACTAA",3,44.92,6.83,-3.93,0.37,1.5,1.2,0.02,">1 nonsynonymous","C31P K48I F167Y",3
"lib1","SARS-CoV-2","AGCTAACCGTTGAACT",1,40.88,10.69,-0.08,0.05,2.9,1.07,0,">1 nonsynonymous","L5H T140L",2
"lib1","SARS-CoV-2","AGCTAACCTATACGTT",3,50.3,8.2,-2.57,0.23,1.5,1.11,0.02,">1 nonsynonymous","N40L K94Y",2
"lib1","SARS-CoV-2","AGCTAACGACTTGAAT",2,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51L Q84W",2
"lib1","SARS-CoV-2","AGCTAACTAAAGCTGC",4,45.97,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F47C C61W K94T",3
"lib1","SARS-CoV-2","AGCTAACTAACTTAGT",1,42.45,6.01,-4.76,0.64,1.5,1.15,0.01,">1 nonsynonymous","C61E I72N I142R",3
"lib1","SARS-CoV-2","AGCTAACTAGCCATAA",8,24.03,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4F V32Q G86R V115L G166V S200R",6
"lib1","SARS-CoV-2","AGCTAACTCTAGTATT",16,213.68,10.33,-0.44,0.05,2.91,1.05,0,">1 nonsynonymous","S43L D59V K87T",3
"lib1","SARS-CoV-2","AGCTAAGGGACACTAA",2,33.86,6,-4.76,1.48,1.5,1.25,0.03,">1 nonsynonymous","A42D I80W R124M Y178I",4
"lib1","SARS-CoV-2","AGCTAAGGTGAAACAA",5,43.35,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88L P96F",2
"lib1","SARS-CoV-2","AGCTAAGGTTGACAGC",2,32.35,6,-4.76,1.81,3,1.1,0,"1 nonsynonymous","P161Y",1
"lib1","SARS-CoV-2","AGCTAATAAAAACTTT",7,63.68,6.18,-4.58,0.6,1.5,1.11,0.02,">1 nonsynonymous","I2M A81V P149T Q176R",4
"lib1","SARS-CoV-2","AGCTAATAAGATTCTT",6,1.55,NA,NA,NA,NA,NA,NA,"stop","S29* I88Y",2
"lib1","SARS-CoV-2","AGCTAATCATTGAGTT",2,108.39,10.69,-0.07,0.04,2.92,1.03,0,">1 nonsynonymous","N40R P149L",2
"lib1","SARS-CoV-2","AGCTAATCTGTGCTGA",2,35.33,10.29,-0.47,0.06,2.95,1,0,">1 nonsynonymous","V37Q K48L K56C N64S",4
"lib1","SARS-CoV-2","AGCTAATGAATTAACA",5,70.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28P G83D N92R D97L A105Y",5
"lib1","SARS-CoV-2","AGCTAATGACGGATCT",4,49.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D68R Y119D",2
"lib1","SARS-CoV-2","AGCTAATTCATGAGTT",4,86.79,6.14,-4.63,0.68,1.5,1.15,0.01,">1 nonsynonymous","F44I V77I T100G N107S G155H",5
"lib1","SARS-CoV-2","AGCTAATTGGTTTCAA",1,43.6,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","P7A I80P Q163Y Y175T",4
"lib1","SARS-CoV-2","AGCTAATTTGAAACGT",1,27.56,6.03,-4.73,1.45,1.5,1.22,0.05,">1 nonsynonymous","I28K V115S Q176V",3
"lib1","SARS-CoV-2","AGCTACAACCTAAAGG",3,6.32,6,-4.76,1.96,3,1.05,0.01,">1 nonsynonymous","S45M C150N",2
"lib1","SARS-CoV-2","AGCTACAATAATTAAC",4,120,10.78,0.02,0.08,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCTACACCCCACCTT",5,43.88,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F62C D90R W106M S139I",4
"lib1","SARS-CoV-2","AGCTACATACAAACAA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","T15R L60* N107D E135M",4
"lib1","SARS-CoV-2","AGCTACATATAGGTGT",7,184.26,10.51,-0.25,0.03,2.88,1.06,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","AGCTACATCCGCCCGT",11,4.19,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib1","SARS-CoV-2","AGCTACCAAAAAGATA",14,95.96,8.32,-2.45,0.2,1.5,1.04,0.01,">1 nonsynonymous","G9N D68E V115M Y178F",4
"lib1","SARS-CoV-2","AGCTACCAACGCTATC",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37S C158D S184T",4
"lib1","SARS-CoV-2","AGCTACCACTCCGGCG",6,88.5,8.31,-2.46,0.14,1.79,1.18,0.01,">1 nonsynonymous","R73L T85M P149A",3
"lib1","SARS-CoV-2","AGCTACCCTATAGACA",2,27.63,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","G51D S69L",2
"lib1","SARS-CoV-2","AGCTACCTAAACAGAG",17,12.01,NA,NA,NA,NA,NA,NA,"stop","C6D D112*",2
"lib1","SARS-CoV-2","AGCTACCTACTCCAAT",4,84.69,10.76,0,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTACGATTTGAAAG",1,26.28,6,-4.76,0.53,3,1.1,0,">1 nonsynonymous","I2V F44I K87I R124L N157H",5
"lib1","SARS-CoV-2","AGCTACGCAATATGCA",1,0.79,NA,NA,NA,NA,NA,NA,"stop","E10Y S36* D98G",3
"lib1","SARS-CoV-2","AGCTACGCACGAACCG",6,47.16,6.33,-4.43,0.71,1.5,1.3,0.03,">1 nonsynonymous","D68H E76S",2
"lib1","SARS-CoV-2","AGCTACGCATAATAGT",2,7.14,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V11F R73F N107V L162N",4
"lib1","SARS-CoV-2","AGCTACGGCATTAGTA",8,179.04,10.75,-0.02,0.06,2.89,1.05,0,"1 nonsynonymous","L188Y",1
"lib1","SARS-CoV-2","AGCTACGTGGTAAATA",8,69.86,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","C61A D75C C150V",3
"lib1","SARS-CoV-2","AGCTACTAAAAAATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5K Y66*",2
"lib1","SARS-CoV-2","AGCTACTAGAAAATAC",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W F8Y T15V K48N G116V",5
"lib1","SARS-CoV-2","AGCTACTAGTGCCTCC",2,36.23,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","P82L K114M G172L",3
"lib1","SARS-CoV-2","AGCTAGACAAAGGCTG",1,23.73,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S45Q P82T P96T K114R R124Q",5
"lib1","SARS-CoV-2","AGCTAGACCGGTCGGC",3,22.37,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","P7M F44G C158E",3
"lib1","SARS-CoV-2","AGCTAGAGAATGAAGG",6,78.49,8.61,-2.16,0.1,2.85,1.07,0,">1 nonsynonymous","Q84K N130S Y159L",3
"lib1","SARS-CoV-2","AGCTAGATAGCATAGA",2,11.44,10.6,-0.17,0.05,2.98,1.01,0,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","AGCTAGATTTCACTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35V P96L K114* G152* F156P",5
"lib1","SARS-CoV-2","AGCTAGCAGTCAAATA",2,66.39,10.22,-0.54,0.07,2.72,1.01,0,">1 nonsynonymous","A33L T55I N171C",3
"lib1","SARS-CoV-2","AGCTAGCATTAGTCAA",9,90.19,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P96C Y143N F167M R179P K198A",5
"lib1","SARS-CoV-2","AGCTAGCCCCTCTAAC",1,77.34,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","G51V G172V",2
"lib1","SARS-CoV-2","AGCTAGGAGGGAGACG",2,5.91,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I80M D137R",2
"lib1","SARS-CoV-2","AGCTAGGCATATACTA",2,40.66,9.99,-0.77,0.08,2.69,1.09,0,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","AGCTAGTGAAATATAG",2,38.18,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9S D97K G101W G172Y",4
"lib1","SARS-CoV-2","AGCTATAAAACGTACT",3,144.68,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","AGCTATAAATATTTTA",2,34.82,9.03,-1.74,0.08,2.86,1.11,0,">1 nonsynonymous","L5M K26T F62L Y119L",4
"lib1","SARS-CoV-2","AGCTATAAATCCCAAC",5,6,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A42T L57N G152M",3
"lib1","SARS-CoV-2","AGCTATAACACAAACA",1,41.87,10.66,-0.1,0.08,2.92,1.03,0,">1 nonsynonymous","T15E N40R",2
"lib1","SARS-CoV-2","AGCTATAAGTATAGCC",3,39.97,10.77,0.01,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTATAATACAACAA",5,68.99,10.01,-0.75,0.08,2.35,1.02,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AGCTATAATGGAGGCA",1,0.45,NA,NA,NA,NA,NA,NA,"stop","Y121S T201*",2
"lib1","SARS-CoV-2","AGCTATACAGCAGCGC",5,22.46,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y39P S69M N92Q E135G",4
"lib1","SARS-CoV-2","AGCTATACATGACCAT",11,183.05,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","V11Y D59F Y119D Y159E",4
"lib1","SARS-CoV-2","AGCTATACCTGGGGGG",3,62.07,7.66,-3.1,0.23,1.5,1.17,0.02,">1 nonsynonymous","A18H N157V",2
"lib1","SARS-CoV-2","AGCTATAGACCAATCG",11,109.64,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9I R25M D90G L95V V153C",5
"lib1","SARS-CoV-2","AGCTATAGGCTACCAC",5,78.01,6,-4.76,2,1.5,1.15,0,"1 nonsynonymous","G172Q",1
"lib1","SARS-CoV-2","AGCTATATTAGCACAA",4,99.74,9.16,-1.6,0.07,2.67,1.14,0,"1 nonsynonymous","G166H",1
"lib1","SARS-CoV-2","AGCTATCACACATAAG",2,47.84,10.69,-0.08,0.04,2.97,1,0,"1 nonsynonymous","Y178W",1
"lib1","SARS-CoV-2","AGCTATCACTTACCAA",7,68.66,10.66,-0.1,0.05,2.89,1.08,0,"1 nonsynonymous","S45D",1
"lib1","SARS-CoV-2","AGCTATCAGATGAATA",5,19.09,6,-4.76,1.36,1.5,1.21,0.04,">1 nonsynonymous","F8P S41Q A81C Y121F",4
"lib1","SARS-CoV-2","AGCTATCAGGTCAAAC",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N I88R W106L E141V G152I",5
"lib1","SARS-CoV-2","AGCTATCATATTAAAT",3,47.56,9.66,-1.1,0.09,1.68,1.17,0,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","AGCTATGAATGAACCT",5,83.94,10.73,-0.03,0.05,2.92,1.03,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","AGCTATGATTAAAAGT",1,10.2,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K94T G146R P177R",3
"lib1","SARS-CoV-2","AGCTATGCAAATAGCC",3,26.55,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C61R P82D D90F P96S",4
"lib1","SARS-CoV-2","AGCTATGGACATAGCA",2,49.97,10.46,-0.31,0.05,2.85,1,0,">1 nonsynonymous","A33I T46D",2
"lib1","SARS-CoV-2","AGCTATGTCTAAAGAG",4,66.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y21H F167D",2
"lib1","SARS-CoV-2","AGCTATTAAAGCCGTT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","G51I P82Y D90* Y121S",4
"lib1","SARS-CoV-2","AGCTATTACTATGGTA",2,0.4,NA,NA,NA,NA,NA,NA,"stop","V32L S36* Y66E Q79H G152L",5
"lib1","SARS-CoV-2","AGCTATTAGGTAATTA",3,54.54,10.13,-0.63,0.07,2.75,1.05,0,"1 nonsynonymous","Y35D",1
"lib1","SARS-CoV-2","AGCTATTGCACCTTTC",2,29.35,9.96,-0.81,0.19,1.93,1.07,0.01,">1 nonsynonymous","N1H C31T S41P N130H",4
"lib1","SARS-CoV-2","AGCTATTTAAAACGTT",2,37.11,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F8N D97C G152I",3
"lib1","SARS-CoV-2","AGCTATTTCGCAGTGA",2,13.78,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","W106D Y119R E141N",3
"lib1","SARS-CoV-2","AGCTCAAAACCTGAGG",1,11.4,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C102P E154L",2
"lib1","SARS-CoV-2","AGCTCAAACAAATCGA",1,14.88,10.72,-0.05,0.08,3,1,0,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","AGCTCAAATTCTTGAT",5,117.75,8.66,-2.1,0.1,2.58,1.09,0,">1 nonsynonymous","D97T G155R T170L",3
"lib1","SARS-CoV-2","AGCTCAACACAAGGTA",3,85.07,10.79,0.02,0.04,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCTCAACCATAATGC",1,7.25,10.42,-0.35,0.15,3,1.01,0,">1 nonsynonymous","I104L N130L",2
"lib1","SARS-CoV-2","AGCTCAACCATGCCCA",1,63.1,8.68,-2.09,0.09,2.92,1.07,0,"1 nonsynonymous","Y159I",1
"lib1","SARS-CoV-2","AGCTCAACCTTTAGTG",1,44,10.86,0.1,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTCAACTGAACAAG",14,2.58,NA,NA,NA,NA,NA,NA,"stop","E10Q S41T D90W D98A Y123L P133I Q176*",7
"lib1","SARS-CoV-2","AGCTCAAGAGATAGCA",7,4.75,NA,NA,NA,NA,NA,NA,"stop","G9V D34L E76*",3
"lib1","SARS-CoV-2","AGCTCAATAATATATA",6,294.01,6.37,-4.39,0.52,1.5,1.22,0.02,">1 nonsynonymous","E10K K94P",2
"lib1","SARS-CoV-2","AGCTCAATTCCGAACA",5,38.61,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","R25M A67F A190Y",3
"lib1","SARS-CoV-2","AGCTCACAACCAAGAT",3,2.68,NA,NA,NA,NA,NA,NA,"stop","A14F V52A L60* D68W Y123V",5
"lib1","SARS-CoV-2","AGCTCACGAGAAATAA",5,96.41,10.66,-0.1,0.05,2.92,1.07,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","AGCTCAGACAACATAC",1,41.95,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S36I D98F Y165N",3
"lib1","SARS-CoV-2","AGCTCAGAGATGAGAT",6,8.61,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V11W S45R N92K Y123C E141T",5
"lib1","SARS-CoV-2","AGCTCAGTAAATAACA",7,74.05,10.78,0.01,0.05,2.98,1,0,">1 nonsynonymous","I28L K128Y",2
"lib1","SARS-CoV-2","AGCTCAGTAACTACAG",8,197.2,8.72,-2.05,0.07,2.88,1.1,0,">1 nonsynonymous","K87G E154V P169N T201N",4
"lib1","SARS-CoV-2","AGCTCATAGCAAACAA",4,66.68,9.11,-1.65,0.11,1.67,1.09,0,">1 nonsynonymous","F17S P54I N120C",3
"lib1","SARS-CoV-2","AGCTCATAGGTTGTTC",2,9.57,8.64,-2.13,0.18,2.12,1.22,0.02,">1 nonsynonymous","G83Y G146M",2
"lib1","SARS-CoV-2","AGCTCATCACCACCTG",1,41.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8K V37G S113R",3
"lib1","SARS-CoV-2","AGCTCATCATGATGAT",3,15.77,10.57,-0.19,0.06,2.95,1.05,0,"1 nonsynonymous","A67V",1
"lib1","SARS-CoV-2","AGCTCATGCAAGTTAC",4,21.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R25T P82I W106M G174R",4
"lib1","SARS-CoV-2","AGCTCCAAGCCATGAG",5,94.81,10.06,-0.7,0.08,2.53,1,0,">1 nonsynonymous","C6N N40S T63L",3
"lib1","SARS-CoV-2","AGCTCCACATAATATG",11,38.37,6.53,-4.24,0.31,1.5,1.22,0.01,">1 nonsynonymous","R25W Q84L Y178F",3
"lib1","SARS-CoV-2","AGCTCCACCCTATAAC",6,31.93,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L5A A14I V37R P96C N107V",5
"lib1","SARS-CoV-2","AGCTCCACTGCACATG",1,41.99,10.15,-0.61,0.1,2.77,1,0,">1 nonsynonymous","S41E G83D K114M T201N",4
"lib1","SARS-CoV-2","AGCTCCAGACTCGGGG",1,91.87,9.91,-0.85,0.1,2.29,1,0,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","AGCTCCAGATATAGTC",2,4973.37,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G9Q V37H F62M K87L N118Y C158T",6
"lib1","SARS-CoV-2","AGCTCCAGATTCTCAT",1,6.44,8.53,-2.24,0.1,2.36,1,0,">1 nonsynonymous","I2R D34V Y119F E154K",4
"lib1","SARS-CoV-2","AGCTCCAGCACATAAA",2,17.23,9.87,-0.9,0.16,2.11,1,0.01,">1 nonsynonymous","S36G S45Y D98Y",3
"lib1","SARS-CoV-2","AGCTCCAGCTGAAGTT",11,3.19,NA,NA,NA,NA,NA,NA,"stop","E10* G83N V103K Q168N",4
"lib1","SARS-CoV-2","AGCTCCATTTATCAGC",1,67.44,8.78,-1.98,0.09,2.85,1.1,0,">1 nonsynonymous","L60R N157Q",2
"lib1","SARS-CoV-2","AGCTCCATTTCTCAAC",3,43.12,6,-4.76,1.35,1.5,1.16,0.01,">1 nonsynonymous","C61V T85M G101D C150K",4
"lib1","SARS-CoV-2","AGCTCCCAATTCACTC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* Y93H",2
"lib1","SARS-CoV-2","AGCTCCCATAATTAGT",1,8.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L Y119F",2
"lib1","SARS-CoV-2","AGCTCCCATCTTACCA",4,38.15,7.76,-3.01,0.38,1.5,1,0.06,">1 nonsynonymous","I2S G9L Y35G D90P I138N",5
"lib1","SARS-CoV-2","AGCTCCCATTTTATAA",2,84.21,8.11,-2.65,0.12,2.02,1.11,0.01,">1 nonsynonymous","A42T S113E",2
"lib1","SARS-CoV-2","AGCTCCCCCCTGGCAT",4,18.91,10.96,0.2,0.11,2.89,1.06,0,">1 nonsynonymous","T3A Y39L",2
"lib1","SARS-CoV-2","AGCTCCCGTTATTTAT",3,97.07,10.72,-0.04,0.03,2.95,1.02,0,">1 nonsynonymous","K114N T201H",2
"lib1","SARS-CoV-2","AGCTCCGATAAAAGCA",1,11.61,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A81M S108M T170V",3
"lib1","SARS-CoV-2","AGCTCCTCCTAACCAA",11,71.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V N58M G86D S184H",4
"lib1","SARS-CoV-2","AGCTCGAAAAAGAGTA",6,49.22,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83A Y121P V181A",3
"lib1","SARS-CoV-2","AGCTCGAATTAACGCC",3,73.05,10.74,-0.02,0.08,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AGCTCGAGTACGGTCG",1,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R N64R G166P F185S",4
"lib1","SARS-CoV-2","AGCTCGATGCATACAC",8,2.44,NA,NA,NA,NA,NA,NA,"stop","N4* G9V A42M Q163S",4
"lib1","SARS-CoV-2","AGCTCGCAGACATAAT",1,54.46,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G86A N107L",2
"lib1","SARS-CoV-2","AGCTCGCCAAATCCAC",9,180.73,10.11,-0.65,0.05,2.87,1.06,0,">1 nonsynonymous","N4T E10Y K87T",3
"lib1","SARS-CoV-2","AGCTCGGTATTCTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18K R25* D34Y Y175*",4
"lib1","SARS-CoV-2","AGCTCGTAAATGGTGG",7,28.03,6.02,-4.74,1.49,1.5,1.39,0.04,">1 nonsynonymous","W23Y N92Y",2
"lib1","SARS-CoV-2","AGCTCGTTATCACTAG",4,89.49,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","F12T V37G P96Q R136L G166Q Q176L",6
"lib1","SARS-CoV-2","AGCTCGTTCATAAGAC",2,73.95,8.43,-2.33,0.13,2.99,1.06,0.01,">1 nonsynonymous","G152N Y159V",2
"lib1","SARS-CoV-2","AGCTCTAACATGGAAA",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T A105F R124A",3
"lib1","SARS-CoV-2","AGCTCTAAGTACATTT",4,0,NA,NA,NA,NA,NA,NA,"stop","S129* G174E",2
"lib1","SARS-CoV-2","AGCTCTAATACCCAAG",5,223.26,10.36,-0.41,0.04,2.92,1.03,0,">1 nonsynonymous","Y39E G152T",2
"lib1","SARS-CoV-2","AGCTCTACACATGGAT",3,37.09,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F44E T100P K128A",3
"lib1","SARS-CoV-2","AGCTCTATCGGCACCA",5,77.93,9.41,-1.36,0.07,2.72,1.1,0,">1 nonsynonymous","F44T Y119K",2
"lib1","SARS-CoV-2","AGCTCTATTTTTTGCT",1,18.62,10.76,-0.01,0.15,2.77,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGCTCTCAGACAGACT",8,1.13,NA,NA,NA,NA,NA,NA,"stop","V37Q S53Q N107L Y121I L131*",5
"lib1","SARS-CoV-2","AGCTCTGAGATCGATG",6,42.51,10.41,-0.36,0.06,2.88,1.06,0,"1 nonsynonymous","N58C",1
"lib1","SARS-CoV-2","AGCTCTGAGTATCAGT",10,42.16,10.81,0.04,0.06,2.92,1.04,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","AGCTCTGGCGAGGATG",2,19.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14F D90M C158P",3
"lib1","SARS-CoV-2","AGCTCTGTAATAGTTC",2,13.66,6.78,-3.99,0.45,1.5,1.23,0.03,">1 nonsynonymous","F17K L60D D98N",3
"lib1","SARS-CoV-2","AGCTCTTAATACATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S F160Y",2
"lib1","SARS-CoV-2","AGCTCTTCCAGCACAA",14,486.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10S S53E P177K",3
"lib1","SARS-CoV-2","AGCTCTTGGAAAGGCA",7,71.48,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S19M Y91K G101T R179P",4
"lib1","SARS-CoV-2","AGCTGAAAAAATTGTA",1,37.43,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","A18Y R25N G152S G174S",4
"lib1","SARS-CoV-2","AGCTGAAAAACTGACC",1,19.62,10.14,-0.62,0.08,2.85,1.07,0,">1 nonsynonymous","C61P T170Q",2
"lib1","SARS-CoV-2","AGCTGAAAAATACCAG",5,4.55,NA,NA,NA,NA,NA,NA,"stop","C6N R25S A89*",3
"lib1","SARS-CoV-2","AGCTGAAAGCACTAAA",4,39.62,10.34,-0.42,0.08,2.81,1,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","AGCTGAAATGCGTGTC",4,80.62,10.14,-0.63,0.07,2.9,1,0,">1 nonsynonymous","Y143M A192Y",2
"lib1","SARS-CoV-2","AGCTGAACACGGGTAT",2,29.54,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y93F N107S P133T C150D",4
"lib1","SARS-CoV-2","AGCTGAACTACTGACT",3,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60D P82D P96N",3
"lib1","SARS-CoV-2","AGCTGAACTTTGCAGA",8,175.66,10.81,0.04,0.07,2.95,1.02,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","AGCTGAATAACAAATG",6,35.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5M C49F I142K Q168M",4
"lib1","SARS-CoV-2","AGCTGAATCAACCAAG",7,6.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44S L57R Q84H A89Y",4
"lib1","SARS-CoV-2","AGCTGAATGCCATGTA",2,16.59,8.47,-2.3,0.26,1.5,1.08,0.03,">1 nonsynonymous","F62L K94V G174R",3
"lib1","SARS-CoV-2","AGCTGAATGCTCCAGT",7,95.16,10.79,0.03,0.07,2.93,1.03,0,">1 nonsynonymous","D98S T140R",2
"lib1","SARS-CoV-2","AGCTGACATCTTTTAG",3,12.44,6.61,-4.15,0.4,1.5,1.09,0.02,">1 nonsynonymous","T85W Y123S G152S N171H Y178E K198H",6
"lib1","SARS-CoV-2","AGCTGACATGATTGAG",2,84.81,10.79,0.03,0.04,2.93,1.04,0,"1 nonsynonymous","L122F",1
"lib1","SARS-CoV-2","AGCTGACCAAATTTAA",2,16.22,10.42,-0.34,0.06,2.92,1.06,0,">1 nonsynonymous","A33Y A105S",2
"lib1","SARS-CoV-2","AGCTGACCTCCTAATG",3,60.3,10.82,0.06,0.04,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTGACGAAAAGCTG",9,1.15,NA,NA,NA,NA,NA,NA,"stop","T15W V20L T55F T100V T170*",5
"lib1","SARS-CoV-2","AGCTGACTCTATCCAA",4,0.56,NA,NA,NA,NA,NA,NA,"stop","F44V F62D L122* V180G",4
"lib1","SARS-CoV-2","AGCTGACTGCGCTATG",4,38.42,6.36,-4.41,0.46,1.5,1.11,0.02,">1 nonsynonymous","W106V G146K",2
"lib1","SARS-CoV-2","AGCTGAGACAACTCCA",1,0.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","AGCTGAGACTATTAGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31S N107T N120L L162I",4
"lib1","SARS-CoV-2","AGCTGAGCATATAACC",2,20.81,8.71,-2.05,0.19,1.91,1.15,0.02,">1 nonsynonymous","A42Q F126P",2
"lib1","SARS-CoV-2","AGCTGAGGGATATGAC",2,9.67,10.94,0.17,0.15,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTGAGGGTTTATAA",3,41.53,6.42,-4.35,0.5,1.5,1.08,0.02,">1 nonsynonymous","S29L C49E",2
"lib1","SARS-CoV-2","AGCTGAGTAATTCTGA",3,31.51,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F44Y N92V",2
"lib1","SARS-CoV-2","AGCTGAGTATATTCTG",11,239.63,10.06,-0.71,0.05,2.89,1.02,0,">1 nonsynonymous","T100I E154H F185Y",3
"lib1","SARS-CoV-2","AGCTGAGTATTTAGGG",2,3.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23V",1
"lib1","SARS-CoV-2","AGCTGAGTCTAAAGTT",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S N30A N107P",3
"lib1","SARS-CoV-2","AGCTGATAAAATTCTA",4,6.68,NA,NA,NA,NA,NA,NA,"stop","P7A A105L Y175*",3
"lib1","SARS-CoV-2","AGCTGATACGAGACAC",1,39.5,10.16,-0.6,0.12,2.35,1.02,0.01,"1 nonsynonymous","R136E",1
"lib1","SARS-CoV-2","AGCTGATATTGACAAA",1,6.8,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","R25I N107I",2
"lib1","SARS-CoV-2","AGCTGATCATTTGGTA",5,120.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P133C G146M Y178W",3
"lib1","SARS-CoV-2","AGCTGATGTTAGTTAA",2,18.62,7.64,-3.12,0.55,1.5,1,0.07,">1 nonsynonymous","S19R A89E Y165N",3
"lib1","SARS-CoV-2","AGCTGCAATCATATAC",9,68.01,9.7,-1.07,0.13,1.88,1.11,0.01,">1 nonsynonymous","L38H K48Q A190T",3
"lib1","SARS-CoV-2","AGCTGCCCACTCATTA",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106N I142S",2
"lib1","SARS-CoV-2","AGCTGCCGCGATGAAC",3,48.47,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N107T P169W L187F K199T",4
"lib1","SARS-CoV-2","AGCTGCGTTAGTTACT",13,280.81,9.66,-1.1,0.04,2.88,1.02,0,">1 nonsynonymous","T55Y Q84T K128A G146T",4
"lib1","SARS-CoV-2","AGCTGCTAGAGATTTG",2,15.83,7.95,-2.81,0.28,1.5,1.08,0.03,">1 nonsynonymous","F62G A81T A89S",3
"lib1","SARS-CoV-2","AGCTGCTGTACGAAAT",2,30.41,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D59K Y93P Q144Y T201P",4
"lib1","SARS-CoV-2","AGCTGGAAACCTAAGC",5,74.98,9.93,-0.84,0.1,2.14,1.06,0,">1 nonsynonymous","L38A F47W T63A A192S",4
"lib1","SARS-CoV-2","AGCTGGAATAGAAATT",1,7.04,9.92,-0.84,0.1,3,1.01,0,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","AGCTGGACGATGTCCT",9,20.17,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T15L V77W D98I Y175K",4
"lib1","SARS-CoV-2","AGCTGGCATCCAAATA",5,4.28,NA,NA,NA,NA,NA,NA,"stop","F62Y G83V Y121*",3
"lib1","SARS-CoV-2","AGCTGGCCCCAAGTGG",3,1.29,NA,NA,NA,NA,NA,NA,"stop","C6L T55P Q84* D98E P133T I142L G174M",7
"lib1","SARS-CoV-2","AGCTGGCGGGATCCAT",7,48.99,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F99K S113Q Y119C R124P S147L",5
"lib1","SARS-CoV-2","AGCTGGCTTTAACCCT",14,61.12,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12G I88R",2
"lib1","SARS-CoV-2","AGCTGGGATCTAGTTA",1,8.21,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37C P54V V103G",3
"lib1","SARS-CoV-2","AGCTGGGCTATTAGTA",3,48.99,10.7,-0.06,0.06,2.79,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTGGTAGGGCTCCC",3,18.39,8.58,-2.19,0.16,2.86,1.03,0.01,">1 nonsynonymous","V115R Q144T G166L",3
"lib1","SARS-CoV-2","AGCTGGTCGACAGACC",7,172.08,8.97,-1.8,0.06,2.86,1.07,0,">1 nonsynonymous","A145D V173R",2
"lib1","SARS-CoV-2","AGCTGGTGGTAACAAA",2,38.67,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D137T L162T",2
"lib1","SARS-CoV-2","AGCTGGTTCCCTGGAG",9,42.05,8.81,-1.95,0.34,1.5,1,0.06,">1 nonsynonymous","F8A F99Q I104C",3
"lib1","SARS-CoV-2","AGCTGTAATTTGCCGC",3,39.03,8.29,-2.47,0.13,2.1,1.1,0.01,">1 nonsynonymous","R73W Q163A",2
"lib1","SARS-CoV-2","AGCTGTACACAATGAG",2,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L S36Y N64L T148N N157V",5
"lib1","SARS-CoV-2","AGCTGTAGTAGAAATG",10,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F D34S T55V N92Y C158S",5
"lib1","SARS-CoV-2","AGCTGTCAAAATCACT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","F8N V37* Y121F L162K",4
"lib1","SARS-CoV-2","AGCTGTGACAGCAGCA",1,8.35,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77Q P96L L162Y",3
"lib1","SARS-CoV-2","AGCTGTGCAAGATTAG",5,121.26,9.87,-0.9,0.07,2.74,1.04,0,">1 nonsynonymous","A14M V32T V173G",3
"lib1","SARS-CoV-2","AGCTGTGGGAGCTCGA",1,15.88,10.83,0.07,0.07,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTGTTAACACTAAG",6,221.27,8.64,-2.13,0.11,2.47,1.11,0,">1 nonsynonymous","G9A D75W A145Q",3
"lib1","SARS-CoV-2","AGCTGTTACTTTGCTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H P82S",2
"lib1","SARS-CoV-2","AGCTGTTGATATCAAA",7,53.93,9.29,-1.47,0.28,1.5,1.01,0.03,">1 nonsynonymous","S29T F62L P82L Y178H",4
"lib1","SARS-CoV-2","AGCTGTTTTTGAGAAA",1,1.51,NA,NA,NA,NA,NA,NA,"stop","T15L K56* T85L Y91P N107V R127M",6
"lib1","SARS-CoV-2","AGCTTAAACCTACTAG",8,71.03,10.02,-0.74,0.08,2.19,1.04,0,"1 nonsynonymous","F12Y",1
"lib1","SARS-CoV-2","AGCTTAAATTGTCAAG",2,10.97,9.42,-1.35,0.17,2.5,1.11,0.01,">1 nonsynonymous","S53V K87T T201Y",3
"lib1","SARS-CoV-2","AGCTTAAATTTTGAGT",2,9.42,10.05,-0.71,0.12,2.89,1,0.01,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","AGCTTAACAAACGACT",6,13.94,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3G D68R",2
"lib1","SARS-CoV-2","AGCTTAACAAAGCAGG",3,53.46,10.55,-0.21,0.04,2.9,1.02,0,">1 nonsynonymous","A33S S43G",2
"lib1","SARS-CoV-2","AGCTTAACAGTATTTC",2,11.04,9.21,-1.55,0.22,2.84,1.12,0.02,"1 nonsynonymous","Q163D",1
"lib1","SARS-CoV-2","AGCTTAACAGTTGGCT",11,115.03,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F70S D112I",2
"lib1","SARS-CoV-2","AGCTTAACTCGACATG",5,0.32,NA,NA,NA,NA,NA,NA,"stop","F8H V77A A105* L183N",4
"lib1","SARS-CoV-2","AGCTTAACTGCACTAG",2,59.03,10.76,-0.01,0.06,2.85,1.08,0,">1 nonsynonymous","G9S K56W L122S",3
"lib1","SARS-CoV-2","AGCTTAAGGCTTCTAA",8,143.06,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17N A18E I28E D68V",4
"lib1","SARS-CoV-2","AGCTTAATCCATGTGC",2,68.61,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","S29K N171H V180Y",3
"lib1","SARS-CoV-2","AGCTTAATTGAAAGAT",12,304.93,10.81,0.05,0.06,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTTACAGGAAGCAA",4,18.1,6,-4.76,2,1.72,1.2,0.02,">1 nonsynonymous","E10N P96Y Y175M",3
"lib1","SARS-CoV-2","AGCTTACGAAACAGTT",7,20.45,6.78,-3.98,0.56,1.5,1.18,0.04,">1 nonsynonymous","P96I L122C",2
"lib1","SARS-CoV-2","AGCTTACGGACATATG",2,28.69,8.3,-2.46,0.24,1.5,1.18,0.02,"1 nonsynonymous","G86Q",1
"lib1","SARS-CoV-2","AGCTTACGGATTGAAA",2,6.45,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15G V103R",2
"lib1","SARS-CoV-2","AGCTTACTCACCCCAG",2,1.2,NA,NA,NA,NA,NA,NA,"stop","N64* G83I",2
"lib1","SARS-CoV-2","AGCTTACTGGACAACG",2,35.17,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","D34G Y50I V71M E186V",4
"lib1","SARS-CoV-2","AGCTTAGAAAATTTCT",7,42.16,9.7,-1.07,0.14,1.68,1.14,0.01,">1 nonsynonymous","T85A Y91V K128V T201K",4
"lib1","SARS-CoV-2","AGCTTAGAGACCGCAT",5,19.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80L Y93W P161L",3
"lib1","SARS-CoV-2","AGCTTAGCAATTGGCA",9,3.1,NA,NA,NA,NA,NA,NA,"stop","D90S L125D K198*",3
"lib1","SARS-CoV-2","AGCTTAGCTCCGTATT",8,47.86,6.27,-4.49,0.57,1.5,1.2,0.02,">1 nonsynonymous","A81S W106I T140F",3
"lib1","SARS-CoV-2","AGCTTAGGAGTAATAG",2,27.46,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C6A N118H C158V",3
"lib1","SARS-CoV-2","AGCTTAGGTGTGAACC",1,83.07,10.53,-0.23,0.06,2.97,1,0,">1 nonsynonymous","L5E F156I",2
"lib1","SARS-CoV-2","AGCTTAGTCGATCGTG",3,47.8,9.87,-0.9,0.11,2.26,1.15,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","AGCTTATAAAATAAAA",9,79.39,9.78,-0.98,0.1,2.45,1.07,0,">1 nonsynonymous","N107A K114M L122V",3
"lib1","SARS-CoV-2","AGCTTATACGACGGAC",2,60.85,10.37,-0.39,0.06,2.94,1.01,0,"1 nonsynonymous","S45M",1
"lib1","SARS-CoV-2","AGCTTATCAGAAATAA",5,78.97,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C49A D97T G146C Y178G",4
"lib1","SARS-CoV-2","AGCTTATCTCCAGTAC",7,103.27,10.6,-0.17,0.03,2.91,1.04,0,">1 nonsynonymous","D59R S147K",2
"lib1","SARS-CoV-2","AGCTTATGGGAATTAT",9,173.89,8.76,-2.01,0.07,2.29,1.09,0,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","AGCTTATGGTGCCGAT",1,20.24,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","I104Y C158I",2
"lib1","SARS-CoV-2","AGCTTATTTAAGATTT",9,53.96,9.52,-1.25,0.16,1.94,1.17,0.01,">1 nonsynonymous","A18G S41F V71L D97N",4
"lib1","SARS-CoV-2","AGCTTCAACTCCAGGA",1,0.62,NA,NA,NA,NA,NA,NA,"stop","P54W T63K D112Q L122*",4
"lib1","SARS-CoV-2","AGCTTCACTTAAGAGA",6,82.29,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N4Y L57T K132L G166E",4
"lib1","SARS-CoV-2","AGCTTCAGCGAACAAA",7,7.55,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4S D97G R127A G152S P169D",5
"lib1","SARS-CoV-2","AGCTTCATCGTACGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39F G83D Y91N S147*",4
"lib1","SARS-CoV-2","AGCTTCCAAGACCATT",2,0.28,NA,NA,NA,NA,NA,NA,"stop","N13L V37* T63L F70P I80L F126L",6
"lib1","SARS-CoV-2","AGCTTCCTGATAGACA",3,22.81,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S43F A67D L111P Y119A F134L",5
"lib1","SARS-CoV-2","AGCTTCGCATTGGGAT",3,1.58,NA,NA,NA,NA,NA,NA,"stop","G83W A89L D97P R136A G166H V173*",6
"lib1","SARS-CoV-2","AGCTTCGCGCATGGAT",1,4.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","AGCTTCTAAGCACATC",4,49.2,10.79,0.02,0.07,2.86,1.06,0,">1 nonsynonymous","F62Y D98S H189E",3
"lib1","SARS-CoV-2","AGCTTCTAGAATACAA",4,26.32,9.5,-1.26,0.13,1.87,1.12,0.01,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","AGCTTCTTAAACTTAC",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R K114E",2
"lib1","SARS-CoV-2","AGCTTCTTAATTCCCG",6,74.76,10.69,-0.08,0.06,2.93,1.03,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","AGCTTCTTATAAAGAC",1,4.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","AGCTTCTTTAAATATG",2,20.13,10.48,-0.28,0.07,2.78,1,0,">1 nonsynonymous","N151L Q163W",2
"lib1","SARS-CoV-2","AGCTTGACGGACATAT",1,19.42,10.65,-0.12,0.08,2.82,1.03,0,">1 nonsynonymous","I2H K56N C61W I104L",4
"lib1","SARS-CoV-2","AGCTTGAGACTAACGA",1,19.41,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","V11I V20Y V52R T63Y S139F E154W",6
"lib1","SARS-CoV-2","AGCTTGATTAATGAAC",5,15.44,7.13,-3.63,0.18,1.5,1.01,0.01,">1 nonsynonymous","N13W I72P Q84T A105T",4
"lib1","SARS-CoV-2","AGCTTGCAAGAAATTA",4,35.35,10.77,0.01,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGCTTGCATTTTAGTA",21,359.94,10.78,0.02,0.06,2.91,1.04,0,"1 nonsynonymous","G152N",1
"lib1","SARS-CoV-2","AGCTTGCCATACACCC",1,50.8,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","P7V N24S V103M E141W",4
"lib1","SARS-CoV-2","AGCTTGCGAAAACACA",2,4.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63P",1
"lib1","SARS-CoV-2","AGCTTGCGCACGCAAG",4,111.82,9.5,-1.26,0.05,2.75,1.1,0,">1 nonsynonymous","A33Y N120F Y175H",3
"lib1","SARS-CoV-2","AGCTTGGAAACACTAT",1,4.81,NA,NA,NA,NA,NA,NA,"stop","R73* D97I",2
"lib1","SARS-CoV-2","AGCTTGGAAATGATGT",1,31.05,9.95,-0.81,0.06,2.91,1.04,0,">1 nonsynonymous","L125V H189Y",2
"lib1","SARS-CoV-2","AGCTTGGAGTATGATA",1,27.89,6.35,-4.41,0.44,1.5,1.15,0.01,">1 nonsynonymous","L131G P149L",2
"lib1","SARS-CoV-2","AGCTTGGGTCCATGAG",13,89.9,6.69,-4.07,0.3,1.5,1.12,0.01,">1 nonsynonymous","C6I A14N Y39S A81R K128P",5
"lib1","SARS-CoV-2","AGCTTGGTGTCCATTG",2,18.21,10.92,0.16,0.15,2.72,1.08,0.01,">1 nonsynonymous","L122Y A190E",2
"lib1","SARS-CoV-2","AGCTTGGTTAAGCGTG",4,74.38,9.79,-0.97,0.07,2.86,1.04,0,"1 nonsynonymous","S164D",1
"lib1","SARS-CoV-2","AGCTTGGTTTTATTAG",2,8.43,NA,NA,NA,NA,NA,NA,"stop","N30* K48N G146V",3
"lib1","SARS-CoV-2","AGCTTGTAATAAAGCA",2,8.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5M Y39F G172T",3
"lib1","SARS-CoV-2","AGCTTGTACAAGTCAA",5,61.04,6.11,-4.66,0.74,1.5,1.2,0.02,">1 nonsynonymous","S19K Y39S L60N K94S",4
"lib1","SARS-CoV-2","AGCTTGTACCCTTACG",4,46.91,10.46,-0.3,0.06,2.88,1.05,0,">1 nonsynonymous","G116R G152N",2
"lib1","SARS-CoV-2","AGCTTGTACGGTATAC",5,110.81,9.18,-1.59,0.14,1.9,1.12,0.01,">1 nonsynonymous","L60S A105F G174M",3
"lib1","SARS-CoV-2","AGCTTGTGAAAAGCGG",7,1416.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45C C102S Y175F",3
"lib1","SARS-CoV-2","AGCTTTAAATTCTCCA",1,27.55,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S36V Y50R S129F N151Y",4
"lib1","SARS-CoV-2","AGCTTTAATAAAGGAG",3,14,7.78,-2.99,0.36,1.73,1.21,0.04,">1 nonsynonymous","S113Q F134L",2
"lib1","SARS-CoV-2","AGCTTTACTCGCGCAA",9,204.79,10.04,-0.73,0.09,2.14,1.05,0,"1 nonsynonymous","I28T",1
"lib1","SARS-CoV-2","AGCTTTAGTAAACATA",1,19.05,8.6,-2.16,0.29,2.02,1,0.03,">1 nonsynonymous","F160T Q176H S184R",3
"lib1","SARS-CoV-2","AGCTTTATACCGACCG",4,26.46,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","L5D P82F V103H C158Q",4
"lib1","SARS-CoV-2","AGCTTTATGATGCCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","T55D P149K V181*",3
"lib1","SARS-CoV-2","AGCTTTATGGAATAGA",2,8.83,6,-4.76,2,1.53,1.16,0.04,">1 nonsynonymous","I2G N24S V37C Y50S K56W N130I",6
"lib1","SARS-CoV-2","AGCTTTATGTCACCCA",5,46.45,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G86L D97E Y175D T201L",4
"lib1","SARS-CoV-2","AGCTTTATTTAAAGGG",2,52.85,10.7,-0.07,0.04,2.92,1.05,0,"1 nonsynonymous","F62M",1
"lib1","SARS-CoV-2","AGCTTTCAGTCCTCGG",3,0.84,NA,NA,NA,NA,NA,NA,"stop","D97* V103T S113R",3
"lib1","SARS-CoV-2","AGCTTTCGAGAAAGCG",13,222.97,10.62,-0.14,0.04,2.92,1.03,0,">1 nonsynonymous","D97G N171Q",2
"lib1","SARS-CoV-2","AGCTTTCTAGGCAACA",5,115.75,10.73,-0.04,0.04,2.93,1.03,0,"1 nonsynonymous","S139A",1
"lib1","SARS-CoV-2","AGCTTTCTCAATGACA",1,44.8,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K26C Y93L V173Q V182A",4
"lib1","SARS-CoV-2","AGCTTTCTTAGTTAAA",5,84.12,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55A N107T G166L",3
"lib1","SARS-CoV-2","AGCTTTCTTATGAAAT",10,90.51,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","T85W C158H",2
"lib1","SARS-CoV-2","AGCTTTGAAAATACCA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","L38K V153* P161R",3
"lib1","SARS-CoV-2","AGCTTTGATAGAACTT",2,18.49,10.97,0.2,0.13,2.79,1.01,0.01,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","AGCTTTGATATAAACA",5,83.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9N G86F Y91H",3
"lib1","SARS-CoV-2","AGCTTTTTTTGGTATG",12,86.3,7.77,-2.99,0.33,1.5,1.14,0.03,">1 nonsynonymous","V77Q D98E F134S",3
"lib1","SARS-CoV-2","AGGAAAAAAAGGAAAT",2,9.27,7.93,-2.83,0.38,1.5,1.08,0.02,">1 nonsynonymous","D34R F44S K114Y E141V",4
"lib1","SARS-CoV-2","AGGAAAAAAGAAGCAC",2,42.85,9.7,-1.07,0.16,1.83,1.15,0.01,">1 nonsynonymous","I28T V173H",2
"lib1","SARS-CoV-2","AGGAAAAAATACCCGG",6,0.08,NA,NA,NA,NA,NA,NA,"stop","I104H W106* C150V",3
"lib1","SARS-CoV-2","AGGAAAAACTAAACAT",4,126.94,10.64,-0.12,0.04,2.85,1.04,0,">1 nonsynonymous","K26M S43C S53T",3
"lib1","SARS-CoV-2","AGGAAAAAGGGACCTT",1,26.09,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","E10V L38Q Y91S F134C S184Q",5
"lib1","SARS-CoV-2","AGGAAAAATCAATTTA",2,70.32,10.36,-0.4,0.07,2.79,1.1,0,"1 nonsynonymous","A105G",1
"lib1","SARS-CoV-2","AGGAAAAATTACTATA",2,16.7,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F17P V37L V65P G146T",4
"lib1","SARS-CoV-2","AGGAAAACAATCAATA",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R W106L G116P",3
"lib1","SARS-CoV-2","AGGAAAACGATGGACC",6,0.3,NA,NA,NA,NA,NA,NA,"stop","N4V E10I K56R D68M G86A Y119* P169M",7
"lib1","SARS-CoV-2","AGGAAAAGAAAAGAAT",2,6.31,9.89,-0.88,0.19,2.2,1,0.01,">1 nonsynonymous","D90V N151C",2
"lib1","SARS-CoV-2","AGGAAAAGATAGCTAA",10,80.23,10.05,-0.72,0.1,2.42,1.02,0,">1 nonsynonymous","A42L N107S N171H",3
"lib1","SARS-CoV-2","AGGAAAAGTAATACAT",1,21.85,10.67,-0.09,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAAAAGTACCTTGT",20,214.33,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16L S43K G86S N118C",4
"lib1","SARS-CoV-2","AGGAAAATACTCATTG",10,61.65,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P7L V77G Q163R F185D",4
"lib1","SARS-CoV-2","AGGAAAATATGCCTAC",5,66.38,8.61,-2.15,0.18,1.5,1.13,0.01,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","AGGAAAATCTACTCAC",1,7.81,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A33S N64K P133I F167A",4
"lib1","SARS-CoV-2","AGGAAAATTTAAAACT",2,28.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S36A F44I G86I R127G Q144V S200Y",6
"lib1","SARS-CoV-2","AGGAAACAATAACACA",2,67.68,10.7,-0.07,0.06,2.91,1.07,0,">1 nonsynonymous","G83F N109R",2
"lib1","SARS-CoV-2","AGGAAACACAGACGCT",5,42.34,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F8K P96L",2
"lib1","SARS-CoV-2","AGGAAACATTCAGGAT",4,16.05,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I2F V103N I142N",3
"lib1","SARS-CoV-2","AGGAAACCAAAACCGA",7,14.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y21S S139I G146T",3
"lib1","SARS-CoV-2","AGGAAACGAAGCGAAC",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y V71R P149W A190V",4
"lib1","SARS-CoV-2","AGGAAACGAGAATAAA",1,20.5,6.56,-4.21,0.54,1.5,1.16,0.03,">1 nonsynonymous","W23M R73K Y143M",3
"lib1","SARS-CoV-2","AGGAAACGTCTACATA",4,77.84,10.75,-0.02,0.05,2.89,1.09,0,">1 nonsynonymous","V37I T148N",2
"lib1","SARS-CoV-2","AGGAAAGAAATGGGGT",12,172.85,10.04,-0.73,0.07,2.81,1.03,0,">1 nonsynonymous","T100L E141V G174W L187V",4
"lib1","SARS-CoV-2","AGGAAAGACAAAAACA",1,40.4,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","AGGAAAGAGCCACAGA",5,109.12,10.96,0.19,0.09,2.81,1.05,0,"1 nonsynonymous","N171W",1
"lib1","SARS-CoV-2","AGGAAAGATACTATAG",3,23.91,10.88,0.12,0.11,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAAAGATGAATGAA",8,134.94,10.65,-0.11,0.06,2.89,1.04,0,"1 nonsynonymous","S29C",1
"lib1","SARS-CoV-2","AGGAAAGCTAAAAATT",1,22.37,10.26,-0.5,0.11,2.77,1.01,0.01,">1 nonsynonymous","F8M A14G R27K",3
"lib1","SARS-CoV-2","AGGAAAGGACGACTTA",4,18.2,10.24,-0.53,0.09,2.82,1,0,">1 nonsynonymous","G9L K56I",2
"lib1","SARS-CoV-2","AGGAAAGGGCAGCAGT",3,0.32,NA,NA,NA,NA,NA,NA,"stop","K56L D68L S113*",3
"lib1","SARS-CoV-2","AGGAAAGTACGCTCAG",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70V G86I I138M",3
"lib1","SARS-CoV-2","AGGAAAGTCTACATGA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83W L122K L162S",3
"lib1","SARS-CoV-2","AGGAAATAAAACAGAT",2,94.2,10.13,-0.63,0.06,2.67,1,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","AGGAAATAAAGTCGAT",3,56.12,9.85,-0.91,0.06,2.79,1.02,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","AGGAAATAAATGTCTG",12,0.66,NA,NA,NA,NA,NA,NA,"stop","V32* K48Y I138* F156L",4
"lib1","SARS-CoV-2","AGGAAATAACAAGTAG",2,5.52,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R73P I88A S113M Y121T",4
"lib1","SARS-CoV-2","AGGAAATAGCAATAAC",4,0.43,NA,NA,NA,NA,NA,NA,"stop","L38S F70T Y93S S113I I138* R179L",6
"lib1","SARS-CoV-2","AGGAAATATATTTAGA",6,82.75,10.65,-0.12,0.07,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAAATCATCATTGA",5,34.29,8.34,-2.43,0.3,1.5,1.25,0.04,">1 nonsynonymous","F156R L183T",2
"lib1","SARS-CoV-2","AGGAAATCTCATGTGG",2,2.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E76S",1
"lib1","SARS-CoV-2","AGGAAATGGCAATTAC",1,31.78,10.77,0.01,0.09,2.96,1.04,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","AGGAAATGGTAACCAG",6,37.92,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","R16G I88K P161F",3
"lib1","SARS-CoV-2","AGGAAATGTCAATCGT",1,18.93,9.23,-1.53,0.31,1.5,1,0.04,">1 nonsynonymous","S36P F44P G152R S184Q",4
"lib1","SARS-CoV-2","AGGAAATTAAATACAT",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G166M",1
"lib1","SARS-CoV-2","AGGAAATTAAGCAAAA",5,99.82,7.61,-3.16,0.28,1.5,1.14,0.02,">1 nonsynonymous","W23M G83N",2
"lib1","SARS-CoV-2","AGGAAATTATACGTAA",5,2.62,NA,NA,NA,NA,NA,NA,"stop","W23G F70I T148R Y159* Y175I H189Y",6
"lib1","SARS-CoV-2","AGGAAATTCGAGCGCT",1,7.1,9.28,-1.48,0.27,2.61,1.17,0.02,">1 nonsynonymous","N107R N110R",2
"lib1","SARS-CoV-2","AGGAAATTTGAATTAA",2,13.93,10.73,-0.03,0.13,2.79,1.07,0.01,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","AGGAAATTTGTATAGG",2,15.27,10.6,-0.17,0.18,2.83,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGGAACAAAAAGGACC",3,55.18,10.6,-0.17,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAACAAAAAGTACA",1,55.1,10.02,-0.75,0.1,2.14,1.02,0,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","AGGAACAAAATTACAG",4,74.27,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","AGGAACACTATTGAGT",1,15.21,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","N118C P161M",2
"lib1","SARS-CoV-2","AGGAACACTTTAACCG",4,59.8,8.39,-2.38,0.35,1.5,1,0.07,">1 nonsynonymous","W23C Y35G D90T",3
"lib1","SARS-CoV-2","AGGAACAGAAGGGGCA",5,9.86,NA,NA,NA,NA,NA,NA,"stop","S29I Y50K L60D S69* D97F L122A Q176S",7
"lib1","SARS-CoV-2","AGGAACATACTCCGCA",5,62.74,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","I2F F44N K56N A81E E141N R179Q",6
"lib1","SARS-CoV-2","AGGAACATTAATGAGA",3,30.95,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G83N N107S N157S F167G",4
"lib1","SARS-CoV-2","AGGAACCGAGCGTAAA",4,3.48,NA,NA,NA,NA,NA,NA,"stop","S69E N92A S129R S147P P169*",5
"lib1","SARS-CoV-2","AGGAACCGATAGTTAT",7,37.38,7.44,-3.33,0.51,1.5,1.22,0.07,">1 nonsynonymous","I2V G86R",2
"lib1","SARS-CoV-2","AGGAACCGCTCCGATG",3,20.49,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y93L T100K",2
"lib1","SARS-CoV-2","AGGAACCGGTGGAAAG",5,70.46,10.77,0.01,0.09,2.93,1.02,0,"1 nonsynonymous","I28M",1
"lib1","SARS-CoV-2","AGGAACCGTTGAAGCA",14,25.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41Y K56N R179F",3
"lib1","SARS-CoV-2","AGGAACCTAAAGTGTT",3,22.34,10.09,-0.67,0.09,2.79,1,0,">1 nonsynonymous","L60Y Y121I K132I",3
"lib1","SARS-CoV-2","AGGAACCTTAATAACT",2,52.55,10.11,-0.66,0.12,2.44,1.01,0.01,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AGGAACGAGCTAGATC",5,13.26,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1T A14L R25H V103K",4
"lib1","SARS-CoV-2","AGGAACGTAGTCGAAG",8,94.44,10.76,-0.01,0.06,2.88,1.04,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","AGGAACGTTCCTTTTT",2,29.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K94Y F167S",2
"lib1","SARS-CoV-2","AGGAACGTTCGACGCA",1,27.63,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37E D112T V173A Y178Q",4
"lib1","SARS-CoV-2","AGGAACTAATTTCCAT",7,118.95,10.12,-0.65,0.04,2.74,1.02,0,">1 nonsynonymous","S36T N107R",2
"lib1","SARS-CoV-2","AGGAACTCAGTATCAA",3,32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8C G74C G101D N171A",4
"lib1","SARS-CoV-2","AGGAACTCGCGACAAT",5,73.77,8.27,-2.5,0.17,1.67,1.12,0.01,">1 nonsynonymous","F8Y A145R P169W",3
"lib1","SARS-CoV-2","AGGAACTGTTAAACAC",3,21.05,8.99,-1.77,0.29,1.65,1.24,0.03,">1 nonsynonymous","N1P E76S S129L",3
"lib1","SARS-CoV-2","AGGAACTTAACAGAAT",2,22.16,9.4,-1.37,0.17,1.98,1.25,0.01,">1 nonsynonymous","G9V A14E D90L",3
"lib1","SARS-CoV-2","AGGAAGAAATCAAGAA",15,249.5,10.77,0,0.05,2.9,1.05,0,"1 nonsynonymous","N40H",1
"lib1","SARS-CoV-2","AGGAAGAAGATCAAAG",4,53.96,6,-4.76,2,1.95,1.18,0,">1 nonsynonymous","F12S D90Y Y123T I138P N151K",5
"lib1","SARS-CoV-2","AGGAAGACATACAAAT",6,42.92,10.68,-0.08,0.07,2.99,1.02,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AGGAAGACGTACTGCA",1,34.56,10.47,-0.3,0.06,2.98,1,0,">1 nonsynonymous","L60F E141M",2
"lib1","SARS-CoV-2","AGGAAGATATACAGAG",2,12.33,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y121G S129L E154F C158I",4
"lib1","SARS-CoV-2","AGGAAGCCCATTGGAC",1,59.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y39Q P54A K87H Y121E R127P I138G G146Y E154C",8
"lib1","SARS-CoV-2","AGGAAGCCGCTACATC",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22P A33S F99H N118H D137E S147T V173F",7
"lib1","SARS-CoV-2","AGGAAGCCTCAAACTA",1,33.82,6,-4.76,1.5,1.5,1.21,0.02,">1 nonsynonymous","E10P Y50N",2
"lib1","SARS-CoV-2","AGGAAGCGAGATTTAG",4,25.94,10.92,0.16,0.07,2.85,1.03,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","AGGAAGGAGCTATTGA",4,159.56,9.05,-1.72,0.07,2.87,1.08,0,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","AGGAAGGAGTACGTGA",2,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90N N107D",2
"lib1","SARS-CoV-2","AGGAAGGATTAACCAC",4,29.68,10.01,-0.75,0.18,2.75,1.04,0.01,">1 nonsynonymous","N118S N130R",2
"lib1","SARS-CoV-2","AGGAAGGCAAATTTTA",2,95.61,10.74,-0.03,0.05,2.87,1.09,0,"1 nonsynonymous","K199T",1
"lib1","SARS-CoV-2","AGGAAGGGTAAGTCTA",1,24.23,6.55,-4.22,0.3,1.59,1.13,0.01,">1 nonsynonymous","C6D G51V F62E K128V Q144A G166L P177L L183P",8
"lib1","SARS-CoV-2","AGGAAGGTTAAAAGTA",6,73.95,9.1,-1.67,0.11,2.29,1.2,0.01,">1 nonsynonymous","A14R D34V L125S",3
"lib1","SARS-CoV-2","AGGAAGTAAGTAGGTA",1,26.3,9.44,-1.33,0.18,2.29,1.19,0.01,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","AGGAAGTACAACATTC",1,34.29,8.89,-1.88,0.06,2.16,1.03,0,">1 nonsynonymous","Y121K V173P",2
"lib1","SARS-CoV-2","AGGAAGTACCGTATTG",11,60.26,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y35S F44R D90R G152P F185C",5
"lib1","SARS-CoV-2","AGGAAGTAGGGGATTA",3,5.19,6.03,-4.73,1.58,3,1.02,0,">1 nonsynonymous","A33L N107W Y159G T170P",4
"lib1","SARS-CoV-2","AGGAAGTCACCTTATA",2,35.26,8.04,-2.72,0.22,2.04,1.13,0.02,">1 nonsynonymous","N4T A22H Y143S",3
"lib1","SARS-CoV-2","AGGAAGTCCGAGGACC",6,44.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N107I R124W P149Q G152A F156L",5
"lib1","SARS-CoV-2","AGGAAGTGAACGAGCC",1,6.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7W F99L Y121I",3
"lib1","SARS-CoV-2","AGGAATAAGATTTAGC",1,47.61,10.73,-0.03,0.04,2.99,1,0,">1 nonsynonymous","V37G N110L",2
"lib1","SARS-CoV-2","AGGAATAAGTCCTTGG",3,46.05,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A33P V115C S184P",3
"lib1","SARS-CoV-2","AGGAATAATAAAGTGA",2,49.4,8.32,-2.45,0.13,2.81,1.09,0.01,">1 nonsynonymous","S43A K87Q G166L",3
"lib1","SARS-CoV-2","AGGAATACAAATCGTC",11,204.19,10.67,-0.09,0.04,2.89,1.03,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","AGGAATACGACTCGCA",3,47.51,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5C S41C N107T Q144P Q168P",5
"lib1","SARS-CoV-2","AGGAATACTCTTTACA",3,42.82,6.45,-4.31,0.5,1.5,1.2,0.02,">1 nonsynonymous","L38P V77M E154D",3
"lib1","SARS-CoV-2","AGGAATAGATTGAATG",7,94.13,10.61,-0.16,0.1,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAATAGGAGAAAGG",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S R25T Y50H F185Y",4
"lib1","SARS-CoV-2","AGGAATATATTCAAAG",1,65.5,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N1K Y21D S129M S139Y N151V",5
"lib1","SARS-CoV-2","AGGAATATGACATACC",10,104.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A33R I80R",2
"lib1","SARS-CoV-2","AGGAATATGATAGCTA",7,222.84,6.95,-3.82,0.23,1.5,1.12,0.01,">1 nonsynonymous","Y143R F160L",2
"lib1","SARS-CoV-2","AGGAATATTTAAACGG",6,14.63,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A14V K56P N130V I138F G155R Y165T",6
"lib1","SARS-CoV-2","AGGAATCAACTTAACT",1,30.43,10.45,-0.31,0.08,2.8,1.06,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","AGGAATCAAGAAAAGA",9,142.32,6.15,-4.62,0.66,1.5,1.13,0.02,">1 nonsynonymous","V37W D137F Q144M G166I",4
"lib1","SARS-CoV-2","AGGAATCACAGGATTC",6,98.43,10.5,-0.26,0.04,2.87,1.07,0,">1 nonsynonymous","K87I E141Y",2
"lib1","SARS-CoV-2","AGGAATCCCCGTGACT",2,6.8,9.31,-1.45,0.26,1.68,1.11,0.04,">1 nonsynonymous","K48F F185I",2
"lib1","SARS-CoV-2","AGGAATCCTCTACTTA",1,13.72,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N40E F44S G86N D97G Q163T",5
"lib1","SARS-CoV-2","AGGAATGAACAACTGG",1,41.9,10.83,0.07,0.08,2.91,1.06,0,"1 nonsynonymous","L5Q",1
"lib1","SARS-CoV-2","AGGAATGATACCATGG",1,58.73,10.13,-0.64,0.1,2.23,1.09,0,"1 nonsynonymous","V182T",1
"lib1","SARS-CoV-2","AGGAATGGTACACCGA",2,8.27,6.98,-3.78,0.34,1.5,1.04,0.01,">1 nonsynonymous","S41F L60K D97T V103M N157F",5
"lib1","SARS-CoV-2","AGGAATGTAGAAGAGA",6,73.27,10.45,-0.32,0.05,2.94,1.04,0,"1 nonsynonymous","A145M",1
"lib1","SARS-CoV-2","AGGAATGTTAGCTAGG",2,31.28,6,-4.76,2,3,1.16,0,">1 nonsynonymous","T3I S29T P177R",3
"lib1","SARS-CoV-2","AGGAATTAAAAGTCTG",3,99.11,10.82,0.05,0.05,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAATTAACAACGAC",5,27.39,9.88,-0.88,0.09,2.04,1.02,0.01,">1 nonsynonymous","D34H P54C",2
"lib1","SARS-CoV-2","AGGAATTACGGACATT",1,6.02,7.55,-3.21,0.12,1.5,1.03,0.01,">1 nonsynonymous","G83L I88T K128Q E141T",4
"lib1","SARS-CoV-2","AGGAATTATCTTTACT",1,91.58,8.36,-2.41,0.17,2.77,1.04,0.01,">1 nonsynonymous","T15N F126S",2
"lib1","SARS-CoV-2","AGGAATTTATAAATAA",2,1.26,NA,NA,NA,NA,NA,NA,"stop","N13I L57W R78L C102* D112* Y119V S139A Q168L",8
"lib1","SARS-CoV-2","AGGAATTTCAATAAAA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","S41R S53T K87L I104* N151D",5
"lib1","SARS-CoV-2","AGGAATTTCTTGTGGA",1,20.16,9.85,-0.91,0.11,2,1.06,0,">1 nonsynonymous","G51K D90V",2
"lib1","SARS-CoV-2","AGGACAAAAAGAAACG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","AGGACAAAACAGTCTA",4,1.93,NA,NA,NA,NA,NA,NA,"stop","R27* P54I K198M",3
"lib1","SARS-CoV-2","AGGACAAAGGCCAATA",2,28.99,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86F N130M R136G",3
"lib1","SARS-CoV-2","AGGACAAAGTGGTGCT",5,113.57,8.6,-2.17,0.11,2.63,1.07,0,">1 nonsynonymous","L111I S113V P149L",3
"lib1","SARS-CoV-2","AGGACAAAGTGTAAAT",7,64.16,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37N K56T V77N G86P K94I F126C I142F",7
"lib1","SARS-CoV-2","AGGACAAATACATTCC",7,41.81,7.59,-3.17,0.36,1.5,1.24,0.03,">1 nonsynonymous","R25M S43N D98A F99W T201M",5
"lib1","SARS-CoV-2","AGGACAACAGATATAA",1,24.7,10.09,-0.67,0.1,2.03,1,0,">1 nonsynonymous","V77L T85L P96S",3
"lib1","SARS-CoV-2","AGGACAAGTTACCATC",4,71.15,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6Y G86L Y178S",3
"lib1","SARS-CoV-2","AGGACAATGTACTGCA",3,58.09,9.65,-1.12,0.14,2.49,1.04,0.01,">1 nonsynonymous","G9R N107Q",2
"lib1","SARS-CoV-2","AGGACACACAATAAAC",3,44.68,8.35,-2.41,0.12,2.77,1.11,0.01,">1 nonsynonymous","I142V G166E",2
"lib1","SARS-CoV-2","AGGACACATAATGGTC",2,31.74,10.83,0.06,0.1,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGACACCAACTAAAT",1,33.69,10.21,-0.55,0.08,2.71,1,0,">1 nonsynonymous","L5V P133K",2
"lib1","SARS-CoV-2","AGGACACCCAACAGAC",9,278.66,10.41,-0.35,0.03,2.91,1.03,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","AGGACACGAATTGATA",2,49.55,9.93,-0.84,0.11,2.15,1,0.01,">1 nonsynonymous","V20T Q168R",2
"lib1","SARS-CoV-2","AGGACACTACTAGGTA",1,15.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86L L122G Y178F",3
"lib1","SARS-CoV-2","AGGACACTACTGTCAT",4,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q T55I V103L E135L G166R S184R",6
"lib1","SARS-CoV-2","AGGACACTATAATAAA",1,25.75,10.77,0,0.03,2.98,1,0,"1 nonsynonymous","A67V",1
"lib1","SARS-CoV-2","AGGACAGCCAGAATAG",1,16.1,8.32,-2.44,0.2,2.36,1.08,0.01,">1 nonsynonymous","N40L Y175M",2
"lib1","SARS-CoV-2","AGGACAGCCTTAACGA",2,29.09,9.4,-1.36,0.19,2.58,1.14,0.01,">1 nonsynonymous","G83R S164D",2
"lib1","SARS-CoV-2","AGGACAGGAGCCCTGA",2,24.63,8.84,-1.92,0.22,1.5,1.18,0.02,">1 nonsynonymous","T3S A14G L38T K56M V173R",5
"lib1","SARS-CoV-2","AGGACATTATGATAAC",5,21.73,7.82,-2.94,0.17,1.76,1.13,0.01,">1 nonsynonymous","K87G G152I S184L",3
"lib1","SARS-CoV-2","AGGACCAAATAAAAAT",3,3.87,NA,NA,NA,NA,NA,NA,"stop","L5I T15N R27* Y175*",4
"lib1","SARS-CoV-2","AGGACCAACTGAGGCA",6,29.34,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D98Y L131S K199T",3
"lib1","SARS-CoV-2","AGGACCACAAAATCTT",11,63.5,8.05,-2.71,0.18,1.91,1.12,0.01,">1 nonsynonymous","V32K N118S Q144T P149F",4
"lib1","SARS-CoV-2","AGGACCACACACACAG",1,13.63,6,-4.76,1.02,1.5,1.1,0.01,">1 nonsynonymous","K48N D90L C150Y",3
"lib1","SARS-CoV-2","AGGACCACTCAGGCCA",2,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E T63Y V103R N107P F160Y",5
"lib1","SARS-CoV-2","AGGACCAGCCATCCAA",8,100.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59E L95M P177Y",3
"lib1","SARS-CoV-2","AGGACCATAATAGACG",2,55.29,10.59,-0.18,0.05,2.91,1.06,0,">1 nonsynonymous","N30A V153L",2
"lib1","SARS-CoV-2","AGGACCATAATGCCAA",7,146.47,10.67,-0.09,0.07,2.85,1.11,0,"1 nonsynonymous","T55K",1
"lib1","SARS-CoV-2","AGGACCCAACAAGCGG",4,102.52,10.75,-0.02,0.05,2.88,1.08,0,"1 nonsynonymous","S29K",1
"lib1","SARS-CoV-2","AGGACCCACTTTTTTG",2,14.42,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","N4I Y50V",2
"lib1","SARS-CoV-2","AGGACCCGCTAGCATT",2,0.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","AGGACCCGGGCATCTG",2,0,NA,NA,NA,NA,NA,NA,"stop","K26* P96S",2
"lib1","SARS-CoV-2","AGGACCCTGACCAATG",6,0.61,NA,NA,NA,NA,NA,NA,"stop","G9D S41V T46* L60R P96G E141S",6
"lib1","SARS-CoV-2","AGGACCGAGGGGAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","F12S V37* V52S Q144P",4
"lib1","SARS-CoV-2","AGGACCGCAATCATAT",3,104.91,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y39K A89M S108P P169C",4
"lib1","SARS-CoV-2","AGGACCGGGTTCGAAA",13,309.43,10.77,0,0.05,2.88,1.07,0,">1 nonsynonymous","T100Y L188D",2
"lib1","SARS-CoV-2","AGGACCGGTTATATAC",4,31.39,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5Y S19R G83V T100P K114W L122T V173G",7
"lib1","SARS-CoV-2","AGGACCGTATTAACAA",2,17,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","G86L P96D G166L",3
"lib1","SARS-CoV-2","AGGACCGTGAACTGAT",3,4.08,NA,NA,NA,NA,NA,NA,"stop","D90V D97* E141T T148N P169Y",5
"lib1","SARS-CoV-2","AGGACCGTTCTAGATG",4,18.23,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","A89E S139H G174V",3
"lib1","SARS-CoV-2","AGGACCTCGGATACGC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y21L L57* Y121K",3
"lib1","SARS-CoV-2","AGGACCTTATTGCCCT",6,54.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25D I80K",2
"lib1","SARS-CoV-2","AGGACGAACGGAGTAT",1,16.43,6.77,-3.99,0.4,1.5,1.12,0.03,">1 nonsynonymous","G86R A105F Y121A P149C",4
"lib1","SARS-CoV-2","AGGACGAATTGAAGTT",3,16.63,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6A Y35W G86K P96R E135K",5
"lib1","SARS-CoV-2","AGGACGATATTCCATT",7,82.37,6,-4.76,1.44,1.5,1.2,0.01,">1 nonsynonymous","L95K V103L A190V K199Q",4
"lib1","SARS-CoV-2","AGGACGCAACGGAGGT",1,8.89,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38N N157R",2
"lib1","SARS-CoV-2","AGGACGCAATACGACC",5,22.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L95N G101T Y119G V181L",4
"lib1","SARS-CoV-2","AGGACGCACACAACTC",2,42.5,10.12,-0.64,0.05,2.7,1,0,">1 nonsynonymous","S53M A89V",2
"lib1","SARS-CoV-2","AGGACGCAGAATAATA",9,227.4,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S113A Q176P",2
"lib1","SARS-CoV-2","AGGACGCCGTTCGAAC",6,113.48,9.86,-0.9,0.14,2.15,1.03,0.01,">1 nonsynonymous","S36K A105F",2
"lib1","SARS-CoV-2","AGGACGCGCAAGAATT",1,7.21,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","C31R Y93L F99K",3
"lib1","SARS-CoV-2","AGGACGCGCCTTACAG",10,137.21,6.07,-4.69,0.76,1.5,1.22,0.01,"1 nonsynonymous","P161K",1
"lib1","SARS-CoV-2","AGGACGGAATTCTATG",4,35.78,9.82,-0.95,0.14,1.84,1.04,0.01,">1 nonsynonymous","F62D G83D",2
"lib1","SARS-CoV-2","AGGACGGAGGTGTTCA",2,23.7,10.82,0.05,0.11,2.82,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGGACGGCCTTAGAAT",3,71.96,10.78,0.02,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGACGTCCCAAAAGG",8,85.7,10.4,-0.37,0.06,2.81,1.06,0,">1 nonsynonymous","P149F V173W",2
"lib1","SARS-CoV-2","AGGACGTCTACCCGCA",13,116.6,7.39,-3.37,0.24,1.5,1.22,0.01,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","AGGACGTGAATGGGGA",5,1.42,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","AGGACGTGACGATTTT",4,33.94,7.13,-3.64,0.22,1.5,1.13,0.01,">1 nonsynonymous","F17R K114G",2
"lib1","SARS-CoV-2","AGGACTAATAGCTAGT",9,0.54,NA,NA,NA,NA,NA,NA,"stop","K26* S43T P96Y",3
"lib1","SARS-CoV-2","AGGACTAATGATCCAG",6,85.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68K Y119T E135S E141Q P161E",5
"lib1","SARS-CoV-2","AGGACTAATGCTTACC",3,12.97,6,-4.76,2,1.5,1.16,0.07,">1 nonsynonymous","A22M S41Y S69R I142G",4
"lib1","SARS-CoV-2","AGGACTAATTGGCACT",3,122.25,8.43,-2.34,0.13,2.96,1.06,0.01,"1 nonsynonymous","F126N",1
"lib1","SARS-CoV-2","AGGACTACACGGTCTA",1,8.71,10.16,-0.61,0.15,2.52,1,0.01,">1 nonsynonymous","S45H N58I",2
"lib1","SARS-CoV-2","AGGACTACCGGTGTCG",7,89.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11A P177D",2
"lib1","SARS-CoV-2","AGGACTACGTATGAAC",7,120.26,10.58,-0.18,0.03,2.91,1.03,0,">1 nonsynonymous","Q163N T201D",2
"lib1","SARS-CoV-2","AGGACTAGAAGATAGT",4,48.55,7.38,-3.38,0.33,1.5,1.03,0.03,">1 nonsynonymous","K26Q A42V T55E R73M V181W",5
"lib1","SARS-CoV-2","AGGACTAGCGACAATT",2,83.93,6.49,-4.28,0.54,1.5,1.18,0.03,">1 nonsynonymous","S45P N118Y K132N E141P",4
"lib1","SARS-CoV-2","AGGACTAGGAAATACA",4,60.29,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S I88F L95H T100R G172D",5
"lib1","SARS-CoV-2","AGGACTAGTGCCTGAT",3,30.03,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C61I P82A G146E V153E",4
"lib1","SARS-CoV-2","AGGACTATATTGAATT",6,27.38,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","L5I A14Y N64Q L95K Y121L V181Y",6
"lib1","SARS-CoV-2","AGGACTCACCCAGGTT",1,6.91,10.02,-0.74,0.22,2.45,1.17,0.01,">1 nonsynonymous","I28F Y35I C49S K128L",4
"lib1","SARS-CoV-2","AGGACTCACGCTCAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K94R P96F F99S Y175*",4
"lib1","SARS-CoV-2","AGGACTCCTTAGTTCA",7,93.4,8.67,-2.1,0.09,2.52,1.07,0,">1 nonsynonymous","S36E N40A T46S Y119L Q163T",5
"lib1","SARS-CoV-2","AGGACTCGCTAAGAAC",3,110.83,10.8,0.04,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGACTCTAGGCTTCA",7,108.95,8.26,-2.51,0.14,2.75,1.08,0.01,">1 nonsynonymous","D98H L125K",2
"lib1","SARS-CoV-2","AGGACTCTCAGCTAAA",3,3,NA,NA,NA,NA,NA,NA,"stop","A18Q C61* I88T E135K V153G",5
"lib1","SARS-CoV-2","AGGACTCTCGTGAGAC",7,257.13,9.11,-1.66,0.1,2.32,1.13,0,">1 nonsynonymous","N1K K56A F126L G155L",4
"lib1","SARS-CoV-2","AGGACTGAATCGGGCA",2,32.18,10.02,-0.74,0.08,2.31,1.03,0,">1 nonsynonymous","F62R N151I",2
"lib1","SARS-CoV-2","AGGACTGACTATGTCC",5,4.04,NA,NA,NA,NA,NA,NA,"stop","I28T I142R T201*",3
"lib1","SARS-CoV-2","AGGACTGCCGATACAA",6,72.02,9.93,-0.84,0.11,2.35,1.05,0,">1 nonsynonymous","S41F V77R",2
"lib1","SARS-CoV-2","AGGACTGTAAGGCAGT",5,27.03,7.44,-3.32,0.1,1.99,1.1,0,">1 nonsynonymous","G117F F126K",2
"lib1","SARS-CoV-2","AGGACTGTCACATCGC",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25P L122N",2
"lib1","SARS-CoV-2","AGGACTGTCGAATAAT",24,170.25,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R27M F62T T100P L162V",4
"lib1","SARS-CoV-2","AGGACTTACGCACAAC",3,16.93,7.09,-3.68,0.38,1.5,1.02,0.04,">1 nonsynonymous","V11F I142T T148V P177E V181K",5
"lib1","SARS-CoV-2","AGGACTTATAACATTC",5,5.93,NA,NA,NA,NA,NA,NA,"stop","N58L C102Y C150* S200H",4
"lib1","SARS-CoV-2","AGGACTTATCACTATT",3,30.26,6.93,-3.83,0.49,1.5,1.1,0.04,">1 nonsynonymous","N64L E76K Y91H P96R",4
"lib1","SARS-CoV-2","AGGACTTCCAGAAGCG",4,64.87,6.34,-4.42,0.57,1.5,1.23,0.02,">1 nonsynonymous","F8I N107L L122E K198Q",4
"lib1","SARS-CoV-2","AGGACTTGAATGATTA",1,17.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90V Y159E",2
"lib1","SARS-CoV-2","AGGACTTGTACCAGCC",3,10.92,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A18N V65Y P82L V115G T140A",5
"lib1","SARS-CoV-2","AGGAGAAAATAGTATT",2,137.04,8.02,-2.74,0.16,2.28,1.16,0.01,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","AGGAGAAAATGAATTC",4,21.37,8.67,-2.1,0.23,1.5,1.07,0.03,">1 nonsynonymous","E76K F160T A192G",3
"lib1","SARS-CoV-2","AGGAGAAAGCGGAACC",9,49.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S69I Q84V D90Y F134E",4
"lib1","SARS-CoV-2","AGGAGAAATGACTACA",5,27.88,6.22,-4.55,0.51,1.5,1.08,0.01,">1 nonsynonymous","R27K D90A S108R T140L P149F F156V",6
"lib1","SARS-CoV-2","AGGAGAAATTAACAAA",2,35.74,9.83,-0.93,0.1,2.31,1.13,0.01,"1 nonsynonymous","V20S",1
"lib1","SARS-CoV-2","AGGAGAAGTCATTTGG",2,41.58,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N4T Y35R S69R P82T G86F F99I N157D",7
"lib1","SARS-CoV-2","AGGAGAAGTGATTGCG",1,7.55,7.92,-2.85,0.47,1.6,1.09,0.05,">1 nonsynonymous","I104Q K128G",2
"lib1","SARS-CoV-2","AGGAGAATACGACCAT",1,30.96,6,-4.76,2,3,1.19,0,">1 nonsynonymous","L131K I142K",2
"lib1","SARS-CoV-2","AGGAGAATATAACAAC",23,118.57,6,-4.76,1.86,1.5,1.15,0.01,">1 nonsynonymous","T15D N107Y E141M",3
"lib1","SARS-CoV-2","AGGAGACACGTCGTTC",8,99.04,10.72,-0.04,0.07,2.93,1.05,0,"1 nonsynonymous","A22R",1
"lib1","SARS-CoV-2","AGGAGACATCCTCAGC",1,8.18,9.56,-1.21,0.17,1.95,1.02,0.01,">1 nonsynonymous","F12K N24H",2
"lib1","SARS-CoV-2","AGGAGACCCCTATTGC",1,20.24,6,-4.76,1.81,1.5,1.09,0.02,">1 nonsynonymous","L5I Y143K P149H F167K K198Q",5
"lib1","SARS-CoV-2","AGGAGACGACTCCACA",2,41.29,10.66,-0.1,0.12,2.78,1.11,0.01,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","AGGAGACGCTCCCGTA",4,106.65,9.64,-1.12,0.03,2.94,1.02,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","AGGAGACGTAAACGAG",3,100.83,6.99,-3.78,0.17,1.78,1.13,0.01,">1 nonsynonymous","C150M S200A",2
"lib1","SARS-CoV-2","AGGAGACTGCTTATGA",1,23.65,10.76,-0.01,0.05,2.96,1.01,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","AGGAGAGCTCTAAAAG",9,57.25,6.3,-4.46,0.47,1.5,1.13,0.02,">1 nonsynonymous","W23P Y93R Y119M V173E",4
"lib1","SARS-CoV-2","AGGAGAGGACTATAAA",2,44.01,9.71,-1.06,0.13,1.97,1.04,0.01,">1 nonsynonymous","A14Y V32R S45T",3
"lib1","SARS-CoV-2","AGGAGAGGCGCCGAAA",10,311.7,10.79,0.02,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAGAGTAAAGTAAC",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F Y93L",2
"lib1","SARS-CoV-2","AGGAGATACCAATTAA",9,168.68,10.7,-0.07,0.05,2.89,1.08,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","AGGAGATATTCAAAGT",15,67.73,8.99,-1.78,0.2,1.71,1.11,0.02,">1 nonsynonymous","D34L F44V",2
"lib1","SARS-CoV-2","AGGAGATCAATGCGAA",2,9.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F47L F185K",2
"lib1","SARS-CoV-2","AGGAGATCAGATAAAA",2,8.72,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","P54E S129F R179P",3
"lib1","SARS-CoV-2","AGGAGATCTGTTCATC",4,76.34,9.98,-0.78,0.08,2.38,1.07,0,">1 nonsynonymous","I28S S200R",2
"lib1","SARS-CoV-2","AGGAGATGACTATAAG",2,76.69,10.06,-0.71,0.06,2.84,1.02,0,">1 nonsynonymous","A81S E154N Y175F",3
"lib1","SARS-CoV-2","AGGAGATTGATTATAG",2,95.38,8.43,-2.33,0.11,2.15,1.07,0.01,">1 nonsynonymous","P96Q G166R",2
"lib1","SARS-CoV-2","AGGAGCAAAAATCCAT",8,145.01,10.75,-0.01,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAGCAAACTTCACT",2,21.27,7.68,-3.09,0.18,1.5,1.14,0.01,">1 nonsynonymous","K94V Y119A N130A T201H",4
"lib1","SARS-CoV-2","AGGAGCAAGGAGACGC",2,5.51,6,-4.76,2,3,1.06,0,">1 nonsynonymous","G9Q P54N I88L L183R",4
"lib1","SARS-CoV-2","AGGAGCACATAGAATA",5,867.42,8.41,-2.36,0.13,2.83,1.04,0.01,">1 nonsynonymous","N130Q Y175S",2
"lib1","SARS-CoV-2","AGGAGCAGAAGTATTC",4,89.85,10.53,-0.24,0.05,2.96,1.02,0,"1 nonsynonymous","N109M",1
"lib1","SARS-CoV-2","AGGAGCAGCGATGTTG",3,80.35,10.84,0.08,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAGCAGTATCAAAA",6,89.77,9.11,-1.66,0.18,1.5,1.15,0.01,">1 nonsynonymous","Y39L P82C K114E",3
"lib1","SARS-CoV-2","AGGAGCATTAACAAGT",4,59.51,10.74,-0.03,0.06,2.92,1.03,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","AGGAGCATTCTCACCG",4,32.49,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","F99R N120Y",2
"lib1","SARS-CoV-2","AGGAGCCAAATAGATA",2,12.59,10.8,0.04,0.06,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAGCCAAATGGCGT",1,44.81,10.56,-0.21,0.05,2.93,1.02,0,">1 nonsynonymous","T3D L60S",2
"lib1","SARS-CoV-2","AGGAGCCAATGTTAGC",6,34.37,10.73,-0.04,0.03,2.94,1.02,0,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","AGGAGCCATATCAACA",3,25.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49F G101V",2
"lib1","SARS-CoV-2","AGGAGCCCTAAAAAGT",3,65.27,10.39,-0.37,0.06,2.81,1.01,0,">1 nonsynonymous","N1L L5K T63I G152S",4
"lib1","SARS-CoV-2","AGGAGCCGAAGCCCCT",1,70.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V11S N58V Y66D L131Q",4
"lib1","SARS-CoV-2","AGGAGCCTCAAAGTAA",1,7.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L I88W",2
"lib1","SARS-CoV-2","AGGAGCGATTGCAAAG",1,5.01,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","E10H A33C L131R",3
"lib1","SARS-CoV-2","AGGAGCTCAACTTTAA",1,9.76,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y91R Y123D L162K",3
"lib1","SARS-CoV-2","AGGAGGAAAAAGAGCA",2,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K K48V N58H D112G S139K Y175G",6
"lib1","SARS-CoV-2","AGGAGGAAACTAGTGG",7,1.92,NA,NA,NA,NA,NA,NA,"stop","C6G Y21F Y35L E76*",4
"lib1","SARS-CoV-2","AGGAGGAACGCTACCT",4,106.43,9.61,-1.16,0.08,2.4,1.05,0,">1 nonsynonymous","A14L S43N D98G S129N",4
"lib1","SARS-CoV-2","AGGAGGAATTCATTAT",7,78.63,8.78,-1.99,0.15,1.59,1.12,0.01,"1 nonsynonymous","R127C",1
"lib1","SARS-CoV-2","AGGAGGAGGCATAAAA",9,37.69,9.22,-1.55,0.14,1.95,1.24,0.01,">1 nonsynonymous","N1G L57G G166A H189Y",4
"lib1","SARS-CoV-2","AGGAGGATGTTAAGAA",1,20.04,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11D F47S P96L T100L E154Q",5
"lib1","SARS-CoV-2","AGGAGGATTTGCCTAA",2,39.8,6.09,-4.67,0.74,1.5,1.16,0.01,">1 nonsynonymous","G9D D34L V77D",3
"lib1","SARS-CoV-2","AGGAGGCAGAGACAAT",3,45.21,8.61,-2.15,0.24,1.66,1.13,0.03,">1 nonsynonymous","C6R A14S Y123A",3
"lib1","SARS-CoV-2","AGGAGGCGCCATACTG",15,360.45,8.9,-1.87,0.05,2.84,1.09,0,">1 nonsynonymous","N157H A192S",2
"lib1","SARS-CoV-2","AGGAGGCTACTGGAAG",2,8.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5K P82I P96H G116L",4
"lib1","SARS-CoV-2","AGGAGGGAAATCATAA",4,51.31,10.76,0,0.06,2.93,1.05,0,"1 nonsynonymous","V37K",1
"lib1","SARS-CoV-2","AGGAGGTAGAATAAAC",1,46.76,10.74,-0.03,0.05,3,1.01,0,">1 nonsynonymous","S184Y S200L",2
"lib1","SARS-CoV-2","AGGAGGTAGACCAAAG",2,43.89,10.4,-0.36,0.06,2.91,1,0,">1 nonsynonymous","F44V D97T T201Y",3
"lib1","SARS-CoV-2","AGGAGGTCTCTAAAGT",7,26.08,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F70L E154C",2
"lib1","SARS-CoV-2","AGGAGGTGCTGGGAAA",3,7.42,8.26,-2.5,0.3,1.72,1.24,0.02,">1 nonsynonymous","W23R K56S",2
"lib1","SARS-CoV-2","AGGAGGTGGATACAAT",1,18.89,8.33,-2.43,0.2,2.19,1.09,0.01,">1 nonsynonymous","N107Q N120T",2
"lib1","SARS-CoV-2","AGGAGGTGGATTCCCG",1,1.85,NA,NA,NA,NA,NA,NA,"stop","G9M F44T V52* G117S R127G N157D",6
"lib1","SARS-CoV-2","AGGAGTAAAACAATGT",6,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E T46R V52P",3
"lib1","SARS-CoV-2","AGGAGTAAACTAACGC",4,50.17,9.74,-1.02,0.11,2.48,1.14,0,">1 nonsynonymous","I104S K114T T148A",3
"lib1","SARS-CoV-2","AGGAGTAACATTCTCG",1,104.95,10.75,-0.01,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGAGTAAGACCTGCC",4,2.4,NA,NA,NA,NA,NA,NA,"stop","C61Y L95Q E141*",3
"lib1","SARS-CoV-2","AGGAGTAATATACAGC",2,43.07,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G51C P96Y N107H F126V",4
"lib1","SARS-CoV-2","AGGAGTAGAAACGAGT",9,0.78,NA,NA,NA,NA,NA,NA,"stop","R16E S36T C49F A89L N118Q Y119* S147N S184Y",8
"lib1","SARS-CoV-2","AGGAGTAGATACTCAC",3,35.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H P96D S139L Y175G",4
"lib1","SARS-CoV-2","AGGAGTATAAGCAGAA",2,45.21,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V52I A81R P96L Y119T I138R",5
"lib1","SARS-CoV-2","AGGAGTATCCGGATCT",1,8.68,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","E10V C61S N92E",3
"lib1","SARS-CoV-2","AGGAGTATGGTAGATG",3,60,9.93,-0.83,0.1,2.59,1,0,"1 nonsynonymous","F47K",1
"lib1","SARS-CoV-2","AGGAGTCAACCGCAGA",2,84.29,6.49,-4.28,0.34,2.04,1.2,0.01,">1 nonsynonymous","V11L S139N Q176E",3
"lib1","SARS-CoV-2","AGGAGTCATAGGACGA",7,84.03,9.81,-0.95,0.09,2.11,1.1,0,">1 nonsynonymous","I2L G51H G116K E141I",4
"lib1","SARS-CoV-2","AGGAGTGACTCAAACT",4,58.43,10.75,-0.02,0.04,2.88,1.04,0,">1 nonsynonymous","N64R F160S",2
"lib1","SARS-CoV-2","AGGAGTGGGGCCGAGA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S36R T46* W106M E141Q G196E",5
"lib1","SARS-CoV-2","AGGAGTTATCGTCGGT",10,187.09,9.39,-1.38,0.08,2.24,1.09,0,">1 nonsynonymous","T15Y A145C",2
"lib1","SARS-CoV-2","AGGAGTTCACTACTCT",2,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E D97L",2
"lib1","SARS-CoV-2","AGGAGTTCTAATCCCT",4,9.5,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L57C R136V P177R V182G",4
"lib1","SARS-CoV-2","AGGATAAAAACTCCTG",4,95.15,10.74,-0.02,0.1,2.84,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATAAAGACTAGTA",6,138.96,10.75,-0.01,0.05,2.89,1.07,0,">1 nonsynonymous","N64H Y178F",2
"lib1","SARS-CoV-2","AGGATAAATAATGAAT",3,98.08,10.6,-0.16,0.04,2.89,1.02,0,">1 nonsynonymous","S129E R136L",2
"lib1","SARS-CoV-2","AGGATAACAATGTCTA",13,16.75,6.9,-3.87,0.54,1.5,1.19,0.03,">1 nonsynonymous","T15C A42V F99R",3
"lib1","SARS-CoV-2","AGGATAACAGGCGGAG",1,9.67,10.27,-0.5,0.13,2.85,1.11,0.01,"1 nonsynonymous","S200G",1
"lib1","SARS-CoV-2","AGGATAACCGTTAGGA",11,246.57,10.38,-0.38,0.03,2.93,1.05,0,">1 nonsynonymous","A42E K87C",2
"lib1","SARS-CoV-2","AGGATAACTCATAAGT",4,29.15,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","L5T C61V A105Q G172M",4
"lib1","SARS-CoV-2","AGGATAACTTTCTAAG",5,136.35,8.42,-2.35,0.13,2.38,1.12,0.01,">1 nonsynonymous","F62L Y143S",2
"lib1","SARS-CoV-2","AGGATAAGCTGATGTA",5,1.93,NA,NA,NA,NA,NA,NA,"stop","I28* W106I L122P S147W",4
"lib1","SARS-CoV-2","AGGATAATACACCCGT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","C6T K87*",2
"lib1","SARS-CoV-2","AGGATAATTCGACGGA",2,8.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3Y R27C D68V F185G",4
"lib1","SARS-CoV-2","AGGATACAAGACGAAA",5,24.26,10.72,-0.04,0.1,2.91,1.01,0,"1 nonsynonymous","I138F",1
"lib1","SARS-CoV-2","AGGATACACCCAAAAC",1,30.81,7.92,-2.85,0.29,1.5,1.1,0.03,">1 nonsynonymous","S41Q D59S A67S T85V F126Y",5
"lib1","SARS-CoV-2","AGGATACACTAACTGC",1,2.53,NA,NA,NA,NA,NA,NA,"stop","C6* C49L P82L G152L S164I",5
"lib1","SARS-CoV-2","AGGATACAGTTACTGG",2,11.52,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1T G9F P54F S69T V180E",5
"lib1","SARS-CoV-2","AGGATACGACATGCAT",6,43.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86A K94S G101S G174M P197V",5
"lib1","SARS-CoV-2","AGGATACGATTAGACG",5,94.67,10.65,-0.11,0.04,2.96,1.02,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","AGGATACGCACAATGC",2,0.22,NA,NA,NA,NA,NA,NA,"stop","N118S F126S V153* C195V",4
"lib1","SARS-CoV-2","AGGATACTAAACCTAA",5,79.67,10.33,-0.43,0.05,2.92,1.05,0,">1 nonsynonymous","G174M S184V A190R",3
"lib1","SARS-CoV-2","AGGATACTAAAGGCGG",4,1,NA,NA,NA,NA,NA,NA,"stop","R16N V37* N120I I142L",4
"lib1","SARS-CoV-2","AGGATACTAAGTCGAG",5,54.96,6,-4.76,1.57,1.5,1.14,0.01,">1 nonsynonymous","S45K F62G D90C G101L K128R R179M",6
"lib1","SARS-CoV-2","AGGATACTATTGTTAC",1,36.31,10.71,-0.05,0.08,2.99,1,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","AGGATAGAACCGTGAA",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R Y39S",2
"lib1","SARS-CoV-2","AGGATAGAATATGCAA",3,68.45,10.82,0.06,0.08,2.88,1.05,0,">1 nonsynonymous","T55A V153E T201Y",3
"lib1","SARS-CoV-2","AGGATAGCAAGGTACG",10,196.82,8.79,-1.97,0.08,2.78,1.1,0,">1 nonsynonymous","L60Y G74Q G155N",3
"lib1","SARS-CoV-2","AGGATAGCAGTAGAAT",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Y K56T D90M A105L",4
"lib1","SARS-CoV-2","AGGATAGGCAGTAGTG",2,15.67,10.04,-0.72,0.22,2.52,1.1,0.01,">1 nonsynonymous","N13W Y35L W106R",3
"lib1","SARS-CoV-2","AGGATAGGTCTGACAA",3,46.63,10.18,-0.58,0.07,2.89,1,0,">1 nonsynonymous","T3L N40D C61R D97H V153G",5
"lib1","SARS-CoV-2","AGGATAGGTTTGTAAA",6,81.15,10.41,-0.36,0.06,2.83,1.01,0,">1 nonsynonymous","T55I T100S",2
"lib1","SARS-CoV-2","AGGATAGTAAAAAACA",9,226.46,10.73,-0.03,0.03,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATAGTACCACCTG",13,23.34,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","T15F G74K D112L Y121L",4
"lib1","SARS-CoV-2","AGGATATAACACTGTG",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M P96W N118Y T140Q",4
"lib1","SARS-CoV-2","AGGATATAAGCTTCTA",2,42.98,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y175K Y178I",2
"lib1","SARS-CoV-2","AGGATATAAGTACTCG",6,144.99,10.49,-0.28,0.05,2.92,1.02,0,">1 nonsynonymous","T55I Y123K E154M",3
"lib1","SARS-CoV-2","AGGATATACTCAAAAC",5,0,NA,NA,NA,NA,NA,NA,"stop","D59G A105V Y143*",3
"lib1","SARS-CoV-2","AGGATATAGAGCTCAT",5,50.44,10.82,0.06,0.07,2.82,1.14,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","AGGATATCTGCTAATG",4,26.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36F A89D K128S G152Y",4
"lib1","SARS-CoV-2","AGGATATGAAGGGCAT",2,36.92,9.14,-1.62,0.19,1.97,1.17,0.01,">1 nonsynonymous","D137H K198S",2
"lib1","SARS-CoV-2","AGGATCACTCATACCA",1,12.43,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","T3L E10G L60F A105L I138K",5
"lib1","SARS-CoV-2","AGGATCAGAAATAAAC",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73L T85V F185S",3
"lib1","SARS-CoV-2","AGGATCAGATAAACCA",9,196.35,10.72,-0.05,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATCAGGATCTTAA",2,60.05,10.72,-0.04,0.05,2.84,1.08,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","AGGATCAGTGCCCACT",10,96.26,10.85,0.08,0.08,2.87,1.07,0,"1 nonsynonymous","Y123F",1
"lib1","SARS-CoV-2","AGGATCCAGCGAAAAA",8,71.51,10.92,0.15,0.09,2.88,1.03,0,">1 nonsynonymous","E10Q P149K Q163V",3
"lib1","SARS-CoV-2","AGGATCCATGTTTCAA",3,39,7.15,-3.62,0.43,1.5,1.15,0.05,">1 nonsynonymous","P7N N58T T100P Q163K",4
"lib1","SARS-CoV-2","AGGATCCCCAACGAGA",3,10.09,10.68,-0.09,0.1,2.84,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATCCCCAACTGTG",2,23.8,9.12,-1.64,0.47,1.5,1.02,0.05,">1 nonsynonymous","S41K P96W",2
"lib1","SARS-CoV-2","AGGATCCGATTGTAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S29* G51V V77M I88L T100L L122E A192T",7
"lib1","SARS-CoV-2","AGGATCCTGGCTCTCT",4,13.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I88Q D98T V103R S139N",4
"lib1","SARS-CoV-2","AGGATCGCTTGCAGTT",1,12.04,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L5S G51C Q84L D98V",4
"lib1","SARS-CoV-2","AGGATCTACAACGTAA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","V65T P82* K128S C158N",4
"lib1","SARS-CoV-2","AGGATCTACATGCCTA",4,26.13,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","R27E S36E D68L G101C G146F",5
"lib1","SARS-CoV-2","AGGATCTACTGCACCA",2,34.64,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F8D D68M H189D K198M",4
"lib1","SARS-CoV-2","AGGATCTCATTCCATA",6,27.52,9.35,-1.41,0.32,1.5,1.04,0.04,">1 nonsynonymous","Q84S L131N P149S",3
"lib1","SARS-CoV-2","AGGATCTGCAATACCA",2,23.32,10.74,-0.02,0.05,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATCTGCCAGTATA",1,58.63,10.75,-0.01,0.03,2.92,1.02,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","AGGATCTTAGAAAAAA",4,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R Q84L I104V G146M T170E K198T",6
"lib1","SARS-CoV-2","AGGATCTTCACACAAG",6,52.36,10.26,-0.51,0.11,2.67,1.01,0.01,">1 nonsynonymous","G51E E154Q",2
"lib1","SARS-CoV-2","AGGATGAAACTTTGTA",11,291.33,10.08,-0.69,0.09,2.61,1,0,">1 nonsynonymous","S41T L57R",2
"lib1","SARS-CoV-2","AGGATGAACCTGCGCA",20,331.53,8.19,-2.57,0.16,2.18,1.11,0.01,">1 nonsynonymous","F44V N110D Y175C",3
"lib1","SARS-CoV-2","AGGATGACTTAAAGCG",1,19.74,9.27,-1.5,0.14,1.67,1.19,0.01,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","AGGATGAGACTAGTGG",4,4.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","AGGATGAGTTAATGTC",4,50.71,10.69,-0.08,0.07,2.81,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATGATAAACTGTC",4,43.01,10.07,-0.7,0.11,2.7,1.05,0.01,">1 nonsynonymous","A42V D90H T100K",3
"lib1","SARS-CoV-2","AGGATGCGCAAACAAA",3,16.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50L I104S",2
"lib1","SARS-CoV-2","AGGATGCTCACGAAAT",13,3.11,NA,NA,NA,NA,NA,NA,"stop","F12* F99K Y119T",3
"lib1","SARS-CoV-2","AGGATGCTCATAATCT",4,18.76,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16F V103S G116A",3
"lib1","SARS-CoV-2","AGGATGGAAAGTCAAG",1,18.39,6,-4.76,2,2.69,1.14,0,">1 nonsynonymous","L5R P82Q Y121F P149L",4
"lib1","SARS-CoV-2","AGGATGGCCCATAAAT",8,59.29,6,-4.76,1.59,1.5,1.2,0.01,">1 nonsynonymous","Y39K C150W",2
"lib1","SARS-CoV-2","AGGATGGCGAACTCTA",1,41.55,10.65,-0.11,0.07,2.82,1.16,0,"1 nonsynonymous","P191T",1
"lib1","SARS-CoV-2","AGGATGGGTGACGAGT",3,17.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14N N58T S113I S200C",4
"lib1","SARS-CoV-2","AGGATGTACAAATAAT",7,187.69,10.57,-0.19,0.04,2.88,1.05,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","AGGATGTACATTCTAA",3,53.19,10.79,0.03,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGATGTGAGGTGGTT",6,40.5,6,-4.76,1.61,1.5,1.22,0.01,">1 nonsynonymous","T3A N120S P161L V173S",4
"lib1","SARS-CoV-2","AGGATGTGTTAACTTA",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H S69G F99S A105V T170L K198M",6
"lib1","SARS-CoV-2","AGGATGTTAAATATAT",3,9.19,6.2,-4.57,2,3,1.07,0,">1 nonsynonymous","V77L I104N S113A",3
"lib1","SARS-CoV-2","AGGATTAAAAGGTTAA",2,4.21,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGGATTAACGCAGTCT",2,17.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T85F A105D R136K E141N",4
"lib1","SARS-CoV-2","AGGATTAAGACTATTT",7,18.11,6.18,-4.58,0.93,1.5,1.16,0.05,"1 nonsynonymous","L183H",1
"lib1","SARS-CoV-2","AGGATTACTGCACAAA",3,27.22,6.33,-4.43,0.68,1.5,1.17,0.03,">1 nonsynonymous","S41C L57V F99D Y143T P149K",5
"lib1","SARS-CoV-2","AGGATTAGAAGGGGAT",3,44.16,6.42,-4.35,0.52,1.5,1.14,0.02,">1 nonsynonymous","F44L N107Y",2
"lib1","SARS-CoV-2","AGGATTAGCAACGCCA",1,7.3,10.23,-0.54,0.13,2.75,1.11,0.01,">1 nonsynonymous","Y123T N130L A190S",3
"lib1","SARS-CoV-2","AGGATTATACAAACGG",8,1.16,NA,NA,NA,NA,NA,NA,"stop","L60S A89I L122*",3
"lib1","SARS-CoV-2","AGGATTATCAGGGACA",1,53.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","W23M A89D L162D Q176W",4
"lib1","SARS-CoV-2","AGGATTATGGGAGGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5W A22* T63Q G166H",4
"lib1","SARS-CoV-2","AGGATTATGTCCTCCA",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T G51D",2
"lib1","SARS-CoV-2","AGGATTCAGTTCATGC",5,9.7,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","Y39L G83C W106T G155S F167S E186F T201S",7
"lib1","SARS-CoV-2","AGGATTCCAAAAGAGG",4,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P V52G L95Y",3
"lib1","SARS-CoV-2","AGGATTCCAACATGAA",3,125.85,10.21,-0.56,0.05,2.81,1.02,0,"1 nonsynonymous","R136A",1
"lib1","SARS-CoV-2","AGGATTCCAAGAATGC",4,54.59,9.91,-0.85,0.15,1.83,1.02,0.01,">1 nonsynonymous","P82L N130A",2
"lib1","SARS-CoV-2","AGGATTCCAAGTACGG",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L P82V G174P",3
"lib1","SARS-CoV-2","AGGATTCCACTTGAGA",2,34.43,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","N1T C31K Y39T V77E",4
"lib1","SARS-CoV-2","AGGATTCCCTCATTCG",1,49.34,10.57,-0.19,0.07,2.89,1.05,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","AGGATTCCTTGCCTAA",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R T100G W106F",3
"lib1","SARS-CoV-2","AGGATTGAGGTGAATA",6,34.67,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N1M N24M L131W P149I",4
"lib1","SARS-CoV-2","AGGATTGCATTATCGT",2,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22G F62Y D98T S139Y G166R",5
"lib1","SARS-CoV-2","AGGATTGGAGTAACGT",1,21.64,6.75,-4.01,0.53,1.5,1.06,0.05,">1 nonsynonymous","V71G K94T I142R",3
"lib1","SARS-CoV-2","AGGATTTACTGAATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19E S69K Y93* H189T",4
"lib1","SARS-CoV-2","AGGATTTCGCGAAGGG",5,10.08,6,-4.76,1.19,3,1.24,0.02,">1 nonsynonymous","N1T T85M V103N G155A G196D",5
"lib1","SARS-CoV-2","AGGATTTGAGTGAAGT",2,0.98,NA,NA,NA,NA,NA,NA,"stop","K26* Y165G K198E",3
"lib1","SARS-CoV-2","AGGATTTGTCGAATCC",2,46.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I28W V77K E141T Y175K",4
"lib1","SARS-CoV-2","AGGATTTTAGATCGAT",5,46.94,9.45,-1.32,0.11,1.89,1.09,0,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","AGGATTTTAGCTTATT",4,80.52,10.4,-0.37,0.04,2.95,1,0,">1 nonsynonymous","L5G A33S L122C S129K",4
"lib1","SARS-CoV-2","AGGATTTTTCATTACC",3,33.84,10.68,-0.08,0.09,2.88,1.05,0,"1 nonsynonymous","H189V",1
"lib1","SARS-CoV-2","AGGCAAAAGCCACCAA",8,99.6,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","Y50M K56E F70I",3
"lib1","SARS-CoV-2","AGGCAAACATTTAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C61V V103*",2
"lib1","SARS-CoV-2","AGGCAAACTTATAGAG",8,76.37,10.79,0.03,0.09,2.85,1.11,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","AGGCAAAGAATAACAA",5,201.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D98S P177L",2
"lib1","SARS-CoV-2","AGGCAAATTATTATAC",5,32.22,6,-4.76,2,3,1.2,0,">1 nonsynonymous","G51C Q84L D112K C158V G196R K199Y",6
"lib1","SARS-CoV-2","AGGCAACTGAATGGCT",1,5.06,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGGCAACTTAGACAAT",3,18.96,10.15,-0.62,0.1,2.65,1.07,0,">1 nonsynonymous","K56R P96T",2
"lib1","SARS-CoV-2","AGGCAAGATCCAACAT",5,0.33,NA,NA,NA,NA,NA,NA,"stop","A33* K87P N130K S139V",4
"lib1","SARS-CoV-2","AGGCAAGCCCACATAA",3,48,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D97S W106Q G146I",3
"lib1","SARS-CoV-2","AGGCAAGGCATCACCA",6,128.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E76S Y143R Q176V",3
"lib1","SARS-CoV-2","AGGCAAGGGACACAAA",1,6.73,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39L T55I R127L T140R C150V",5
"lib1","SARS-CoV-2","AGGCAAGTAGGTTAGG",1,6.14,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","I88C N120D C158N F167H",4
"lib1","SARS-CoV-2","AGGCAATAGCGATGCA",1,24.41,6.36,-4.41,0.34,1.5,1.04,0.01,">1 nonsynonymous","G101F D137M G172Y",3
"lib1","SARS-CoV-2","AGGCAATCTCTGTAGC",2,18.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5Q S19F C61L K94N N118D",5
"lib1","SARS-CoV-2","AGGCAATTAGGATGTT",3,54.39,8.55,-2.21,0.18,2.19,1.09,0.01,">1 nonsynonymous","N40C Y119I",2
"lib1","SARS-CoV-2","AGGCAATTCCAATTTG",5,66.14,10.63,-0.13,0.05,2.97,1.01,0,">1 nonsynonymous","C61M I104F",2
"lib1","SARS-CoV-2","AGGCAATTGTCTGAGT",3,16.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44A D98S S108F G174T K199Q",5
"lib1","SARS-CoV-2","AGGCACAACACAGTAG",4,132.5,9.73,-1.04,0.09,2.62,1.08,0,">1 nonsynonymous","E10T R78G Y178A A190S",4
"lib1","SARS-CoV-2","AGGCACAATGTAATTG",7,44.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A89L Y123V F134H L162S",4
"lib1","SARS-CoV-2","AGGCACAGCGATAGAT",1,53.86,10.59,-0.17,0.08,2.87,1.02,0,">1 nonsynonymous","G9N S19A",2
"lib1","SARS-CoV-2","AGGCACAGCTGCTAGG",1,23.23,10.43,-0.34,0.11,2.77,1.06,0,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","AGGCACATAATAGAAG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","D75S P96T N107K F156*",4
"lib1","SARS-CoV-2","AGGCACATAATGACCC",1,1.33,NA,NA,NA,NA,NA,NA,"stop","F12S D75L Q84L F99R Y123*",5
"lib1","SARS-CoV-2","AGGCACATACCTCTGA",1,10.7,10.85,0.09,0.1,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCACATTCCACAAA",14,152.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11A F17S F44K V103L W106F T201N",6
"lib1","SARS-CoV-2","AGGCACCCGAGTCGTA",1,10.54,6,-4.76,2,1.5,1.4,0.06,">1 nonsynonymous","V37R C49Y A105S P177A F185H",5
"lib1","SARS-CoV-2","AGGCACCGAATTATGT",2,63.35,10.84,0.08,0.05,2.93,1.03,0,">1 nonsynonymous","T3Y Y39T",2
"lib1","SARS-CoV-2","AGGCACCTTTGTCCGT",4,69.99,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9R A105V F167I E186G",4
"lib1","SARS-CoV-2","AGGCACGATGTGTACC",2,3.27,NA,NA,NA,NA,NA,NA,"stop","L60V T201*",2
"lib1","SARS-CoV-2","AGGCACGCACAGACTT",4,52.66,6,-4.76,2,1.5,1.35,0.06,">1 nonsynonymous","L38K V71K R127D K132I",4
"lib1","SARS-CoV-2","AGGCACGCCGTAAACC",1,12.62,10.55,-0.22,0.16,2.9,1.1,0.01,">1 nonsynonymous","T3M Y35I P54E",3
"lib1","SARS-CoV-2","AGGCACGCGTAACCAA",1,32.53,8.58,-2.18,0.13,2.28,1.18,0.01,"1 nonsynonymous","Q176W",1
"lib1","SARS-CoV-2","AGGCACTCGTCAGATT",4,24.97,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","A33F I80M G86H N107Y K198V",5
"lib1","SARS-CoV-2","AGGCAGAAAGACCTTT",3,0.34,NA,NA,NA,NA,NA,NA,"stop","F47* P149S",2
"lib1","SARS-CoV-2","AGGCAGAAAGTTTAGT",4,108.26,10.22,-0.55,0.04,2.92,1.03,0,">1 nonsynonymous","R73M H189S",2
"lib1","SARS-CoV-2","AGGCAGAACCAAAAGG",1,8.29,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N13I N130I Y175L",3
"lib1","SARS-CoV-2","AGGCAGAATAAAACAA",1,94.32,10.7,-0.06,0.04,2.94,1.01,0,">1 nonsynonymous","A18E D59T",2
"lib1","SARS-CoV-2","AGGCAGAATCATACCT",2,9.15,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I2D D90P T201K",3
"lib1","SARS-CoV-2","AGGCAGAATTCTAAAT",2,17.62,10.7,-0.07,0.1,2.83,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGCAGAATTTTGTAA",7,8.79,8.72,-2.05,0.3,1.5,1.15,0.06,">1 nonsynonymous","Y50D P54R C61R K128D N171F",5
"lib1","SARS-CoV-2","AGGCAGACCATCCATG",8,58.46,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F17S D59N A89L F126N",4
"lib1","SARS-CoV-2","AGGCAGAGTAATCAAT",2,21.7,8.17,-2.6,0.35,1.71,1.18,0.05,">1 nonsynonymous","G51V Y119H E154C",3
"lib1","SARS-CoV-2","AGGCAGATAACAAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","A67P T148*",2
"lib1","SARS-CoV-2","AGGCAGATAACGTTTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","E10* T100L",2
"lib1","SARS-CoV-2","AGGCAGATTTTGACGT",6,58.52,10.85,0.09,0.06,2.91,1.03,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","AGGCAGCAGATCTCGC",8,153.11,10.72,-0.05,0.06,2.91,1.06,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","AGGCAGCGCCAGTCAT",1,16.14,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5V R16F Y35V S45W G86N",5
"lib1","SARS-CoV-2","AGGCAGCGGTCCTGCG",4,69.52,10.04,-0.73,0.08,2.51,1.08,0,">1 nonsynonymous","A14N D90L V115M",3
"lib1","SARS-CoV-2","AGGCAGCGTCCGTAGC",1,35.27,9.9,-0.86,0.06,2.83,1.1,0,">1 nonsynonymous","D97C G174K",2
"lib1","SARS-CoV-2","AGGCAGCTAACTGGCA",3,62.46,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D34A C150S T170S",3
"lib1","SARS-CoV-2","AGGCAGGAGAAGTCTA",3,2.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95K",1
"lib1","SARS-CoV-2","AGGCAGGATTATAGGA",4,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L V103K",2
"lib1","SARS-CoV-2","AGGCAGGCCCTATGCA",5,0.85,NA,NA,NA,NA,NA,NA,"stop","V37A S43T G51R L95S V173L R179*",6
"lib1","SARS-CoV-2","AGGCAGGTATATCTCG",1,7.13,9.36,-1.41,0.19,2.61,1,0.01,">1 nonsynonymous","P96H L122E",2
"lib1","SARS-CoV-2","AGGCAGTAATTACTGA",3,2.91,NA,NA,NA,NA,NA,NA,"stop","N4F S45V D98R Y123* G174A T201M",6
"lib1","SARS-CoV-2","AGGCATAACCCTAAGA",13,119.11,6.57,-4.2,0.29,1.5,1.18,0.01,">1 nonsynonymous","R25P P149L",2
"lib1","SARS-CoV-2","AGGCATAAGCAGCCGA",5,123.39,9.03,-1.73,0.1,2.06,1.11,0,">1 nonsynonymous","G9N V153G L162Y",3
"lib1","SARS-CoV-2","AGGCATAATAAAACAA",16,10.57,NA,NA,NA,NA,NA,NA,"stop","A22* G51F D98G F156T Y175S",5
"lib1","SARS-CoV-2","AGGCATACGCCCTCAG",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N I28L Q84G Y93F F99E K132L L162S",7
"lib1","SARS-CoV-2","AGGCATACTCGTAACC",2,0.33,NA,NA,NA,NA,NA,NA,"stop","K56L N92* L122S S139I",4
"lib1","SARS-CoV-2","AGGCATAGGTCCTGAG",6,40.01,9.73,-1.04,0.14,1.57,1.15,0.01,">1 nonsynonymous","T3R Y91G I104L",3
"lib1","SARS-CoV-2","AGGCATATACCGCGTT",9,55.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9S S45F Y66P L125V",4
"lib1","SARS-CoV-2","AGGCATATCTCCTGAA",3,58.35,10.81,0.04,0.08,2.83,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGCATATGAACACTG",4,14.51,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39F W106I Y123S D137F",4
"lib1","SARS-CoV-2","AGGCATCAAACGCATG",1,16.6,10.71,-0.05,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCATCACAGAATAC",2,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L V20R D98Y P149Y A192R G196K",6
"lib1","SARS-CoV-2","AGGCATCGATATAGAA",2,27.83,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T85Y Y91K R136S T148Y",4
"lib1","SARS-CoV-2","AGGCATCTACCAATCC",1,15.83,10.74,-0.02,0.05,2.99,1,0,">1 nonsynonymous","T46L C61Q",2
"lib1","SARS-CoV-2","AGGCATGACTTAGCGA",5,145.95,10.73,-0.03,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCATGCCGAACAAG",9,113.6,10.31,-0.46,0.05,2.88,1.03,0,">1 nonsynonymous","S29G K128C",2
"lib1","SARS-CoV-2","AGGCATGTATGCTAAC",1,7.93,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56W L131W",2
"lib1","SARS-CoV-2","AGGCATGTTCGAAGAA",7,79.34,10.74,-0.02,0.05,2.87,1.06,0,">1 nonsynonymous","L5V N120S",2
"lib1","SARS-CoV-2","AGGCATTACAACACCT",1,18.21,10.8,0.03,0.13,2.92,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGGCATTCCTTGTAAA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","C61N V103D F134* S139N",4
"lib1","SARS-CoV-2","AGGCATTTGCAACTTT",3,43.21,8.46,-2.3,0.09,2.82,1.03,0,">1 nonsynonymous","L57F N120P",2
"lib1","SARS-CoV-2","AGGCCAAAAAAAACCA",2,6.86,6.08,-4.68,0.96,3,1.22,0.02,">1 nonsynonymous","F12D K87L P96V C158Y S184D",5
"lib1","SARS-CoV-2","AGGCCAAAAAACGGTG",2,53.65,8.41,-2.35,0.13,2.89,1,0.01,">1 nonsynonymous","E154L Q168I",2
"lib1","SARS-CoV-2","AGGCCAAAATATTCAT",1,43.79,10.67,-0.1,0.07,2.92,1.02,0,">1 nonsynonymous","I72V N120L",2
"lib1","SARS-CoV-2","AGGCCAAACAAGTTCT",13,164.97,10.14,-0.62,0.07,2.66,1.02,0,">1 nonsynonymous","A22F I138M",2
"lib1","SARS-CoV-2","AGGCCAAACATTGTAT",2,17.52,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","L5S L57K N118D K132L I142Y G166L",6
"lib1","SARS-CoV-2","AGGCCAAAGAAGTTGA",2,23.76,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Y91V P96V P133L",3
"lib1","SARS-CoV-2","AGGCCAAAGACTCAAT",2,33.14,9.58,-1.18,0.14,2.01,1.01,0.01,">1 nonsynonymous","G86S T148S",2
"lib1","SARS-CoV-2","AGGCCAAAGCAAACAC",2,60.94,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I28W L60E F99K T170R Y178D",5
"lib1","SARS-CoV-2","AGGCCAACCAATAACC",4,0.56,NA,NA,NA,NA,NA,NA,"stop","A14* S45F G83L F99H E141D A192W",6
"lib1","SARS-CoV-2","AGGCCAACTAATCACT",6,2.33,NA,NA,NA,NA,NA,NA,"stop","N4K R27A S41E T201*",4
"lib1","SARS-CoV-2","AGGCCAACTGATATCT",11,67.52,6,-4.76,1.79,1.5,1.21,0.04,">1 nonsynonymous","Y50N A67S K128E",3
"lib1","SARS-CoV-2","AGGCCAACTTTAGGGT",7,78.1,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D75T S129T C158T",3
"lib1","SARS-CoV-2","AGGCCAAGCCAGTTCA",1,11.3,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P7V T15C Y35E N92L T100F K128D R136L",7
"lib1","SARS-CoV-2","AGGCCAATAAAAACGA",3,18.26,10.03,-0.73,0.13,2.67,1.05,0.01,">1 nonsynonymous","S45M A190V",2
"lib1","SARS-CoV-2","AGGCCAATAAAATCGA",1,17.55,9.64,-1.12,0.16,1.88,1.16,0.01,">1 nonsynonymous","F44S S139V",2
"lib1","SARS-CoV-2","AGGCCAATGGGCAGGA",8,160.87,10.66,-0.1,0.04,2.85,1.07,0,"1 nonsynonymous","N58A",1
"lib1","SARS-CoV-2","AGGCCACAATCCCTCA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V I28R A192Q",3
"lib1","SARS-CoV-2","AGGCCACACAAATTCC",3,3.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","AGGCCACACAATCCCG",2,88.77,10.33,-0.43,0.1,2.49,1.02,0,">1 nonsynonymous","N13W F134L S147P S200A",4
"lib1","SARS-CoV-2","AGGCCACACTAAATAA",7,96.66,10.05,-0.72,0.07,2.59,1.06,0,">1 nonsynonymous","N13T S29E L122N S129A",4
"lib1","SARS-CoV-2","AGGCCACATTCTGCTT",5,32.11,10.13,-0.63,0.06,2.76,1.01,0,">1 nonsynonymous","N4R Y121S",2
"lib1","SARS-CoV-2","AGGCCACCCTATAGAA",7,97.02,6.16,-4.61,1.02,1.5,1.32,0.03,">1 nonsynonymous","S41A D59Q Y93L",3
"lib1","SARS-CoV-2","AGGCCACCTAGTCACC",6,35.69,10.75,-0.01,0.1,2.88,1.03,0,"1 nonsynonymous","N24T",1
"lib1","SARS-CoV-2","AGGCCACTAAACTAAC",4,17.33,6,-4.76,2,2.46,1.31,0.01,">1 nonsynonymous","I88S E141V",2
"lib1","SARS-CoV-2","AGGCCACTATGACGCG",4,44.05,10.81,0.05,0.07,2.93,1,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","AGGCCAGCTAAACAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28K Y121*",2
"lib1","SARS-CoV-2","AGGCCAGGGGAGTAAG",2,0.34,NA,NA,NA,NA,NA,NA,"stop","V37L S45G D90Y N120R Y175*",5
"lib1","SARS-CoV-2","AGGCCATTATGGAGAG",4,17.8,8.43,-2.33,0.43,1.5,1,0.06,">1 nonsynonymous","A33K G146V",2
"lib1","SARS-CoV-2","AGGCCATTCAATGAGG",5,43.5,10.44,-0.32,0.08,2.6,1.03,0,">1 nonsynonymous","R78C T85N",2
"lib1","SARS-CoV-2","AGGCCATTCCATGGCT",4,105.11,8.71,-2.05,0.15,2.25,1.15,0.01,">1 nonsynonymous","N58F N120S A145R",3
"lib1","SARS-CoV-2","AGGCCATTTAATATGC",4,9.97,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C6L T15Q Y143N",3
"lib1","SARS-CoV-2","AGGCCCACAGCGCAAA",4,5.4,6.99,-3.77,0.24,3,1.18,0,">1 nonsynonymous","A42R G83M F99V Y119R",4
"lib1","SARS-CoV-2","AGGCCCAGAGTATTAC",4,55.66,10.61,-0.15,0.06,2.91,1.03,0,">1 nonsynonymous","N120H I138Q T201M",3
"lib1","SARS-CoV-2","AGGCCCAGCGAACTCT",1,30.79,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T55K T85Y Y123V R179A",4
"lib1","SARS-CoV-2","AGGCCCAGGGGACCAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib1","SARS-CoV-2","AGGCCCATACTCCGAT",5,7.08,NA,NA,NA,NA,NA,NA,"stop","E10F V65H N107S S129*",4
"lib1","SARS-CoV-2","AGGCCCCACACTAGCT",11,28.86,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S45Q G116R N118T K128F R136S P149R V182W",7
"lib1","SARS-CoV-2","AGGCCCCACAGGCTAC",4,101.02,7.65,-3.11,0.26,1.5,1.09,0.02,">1 nonsynonymous","D90F R136E",2
"lib1","SARS-CoV-2","AGGCCCCCGCGAAAAA",5,34.02,6.22,-4.55,0.89,1.5,1.2,0.03,">1 nonsynonymous","D59T V77F G83L S108P S113L",5
"lib1","SARS-CoV-2","AGGCCCCCGTGGTCAT",2,35.58,9.95,-0.81,0.09,2.69,1,0,">1 nonsynonymous","G9V D59N I142T",3
"lib1","SARS-CoV-2","AGGCCCCGGACGGCAC",9,99.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L S139L Y178L",3
"lib1","SARS-CoV-2","AGGCCCCGTTGGCTAC",2,96.25,9.7,-1.06,0.07,2.74,1.07,0,">1 nonsynonymous","S129C Y143L",2
"lib1","SARS-CoV-2","AGGCCCGAACGTCTCA",2,77.76,8.9,-1.87,0.2,1.5,1.08,0.02,">1 nonsynonymous","L60Y V77G",2
"lib1","SARS-CoV-2","AGGCCCGATGAGAACC",4,102.49,10.79,0.02,0.06,2.97,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGCCCGTGAATCCCC",3,29.43,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C6M S19M N40D F44L Y123V",5
"lib1","SARS-CoV-2","AGGCCCTAGAAATTCT",13,96.82,10.71,-0.05,0.06,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCCCTCAAAACCCC",3,15.74,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A89F Y119F I138W Y159W",4
"lib1","SARS-CoV-2","AGGCCCTGGAACCTAA",1,21,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N58T N64R V77T Y159T",4
"lib1","SARS-CoV-2","AGGCCCTTCGAATAGA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T G74N T100G N107Y Y119S",5
"lib1","SARS-CoV-2","AGGCCCTTGCTATATA",2,104.58,10.68,-0.08,0.04,2.88,1.09,0,">1 nonsynonymous","N40T Y143F",2
"lib1","SARS-CoV-2","AGGCCGAAACTAACTT",6,69.02,8,-2.76,0.21,1.5,1.13,0.01,">1 nonsynonymous","S41R S108I",2
"lib1","SARS-CoV-2","AGGCCGAACTGATGAA",2,1.11,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGGCCGAAGAACAACA",4,23.16,10.29,-0.48,0.16,2.06,1.04,0.01,">1 nonsynonymous","N1S A14C S43F D97R",4
"lib1","SARS-CoV-2","AGGCCGAGCCCCGGGC",6,82.25,10.79,0.03,0.07,2.93,1.04,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","AGGCCGAGTAAAATGT",10,121.29,10.53,-0.24,0.03,2.92,1.02,0,">1 nonsynonymous","L122R R127S",2
"lib1","SARS-CoV-2","AGGCCGCCGAGAAAAT",2,5.82,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","T3P Y50V V115G R124E A145L G174T",6
"lib1","SARS-CoV-2","AGGCCGCGACGAAGAG",11,92.22,10.8,0.04,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCCGCTCTATTAGG",3,63,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C61N A81G F126Y C158M",4
"lib1","SARS-CoV-2","AGGCCGGATATGTGTA",2,9,6,-4.76,2,3,1.08,0,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","AGGCCGGTTGCGCGAT",3,40.83,10.76,-0.01,0.04,2.98,1,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","AGGCCGTAACTCCGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","V11C N58* A105V",3
"lib1","SARS-CoV-2","AGGCCGTCAATGCCGT",5,209.77,10.73,-0.04,0.05,2.93,1.03,0,">1 nonsynonymous","I88V T201M",2
"lib1","SARS-CoV-2","AGGCCGTTTTCCTGAA",2,1.21,NA,NA,NA,NA,NA,NA,"stop","N4* N58D D137* S184V",4
"lib1","SARS-CoV-2","AGGCCTACGACCAATA",14,166.04,10.53,-0.23,0.02,2.94,1.01,0,">1 nonsynonymous","E10L R78G",2
"lib1","SARS-CoV-2","AGGCCTACTCACATAA",14,138.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y119S P133L G146L",3
"lib1","SARS-CoV-2","AGGCCTCACCGCCAAA",1,11.04,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5N D90G F99S N157H",4
"lib1","SARS-CoV-2","AGGCCTCTGATAACGT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","C61* A81* D90V",3
"lib1","SARS-CoV-2","AGGCCTGAGAAGAATC",7,35.24,10.83,0.07,0.06,2.93,1.04,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","AGGCCTGGACCGAGGA",2,30.94,9.17,-1.6,0.3,1.71,1.18,0.05,">1 nonsynonymous","R78M S129L D137E",3
"lib1","SARS-CoV-2","AGGCCTGGGAAAAACA",4,30.68,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L122I G146M G152D G174I S184A",5
"lib1","SARS-CoV-2","AGGCCTGTGCAAATAT",1,5.9,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","T46S",1
"lib1","SARS-CoV-2","AGGCCTTAATTTCAGA",7,77.5,6.36,-4.41,0.61,1.5,1.21,0.03,">1 nonsynonymous","D68W A89K",2
"lib1","SARS-CoV-2","AGGCGAAAAGATAACA",3,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S W106M L122G E154T Y165F",5
"lib1","SARS-CoV-2","AGGCGAAAAGCTCTTC",3,66.59,10.72,-0.04,0.06,2.94,1.05,0,">1 nonsynonymous","L5T S29C L122E",3
"lib1","SARS-CoV-2","AGGCGAAATTTACGCA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","C6R V153* F160S",3
"lib1","SARS-CoV-2","AGGCGAACATGTACAT",2,39.09,10.64,-0.12,0.04,2.96,1,0,">1 nonsynonymous","R16G T201R",2
"lib1","SARS-CoV-2","AGGCGAGACTGTATGA",2,20.89,10.33,-0.44,0.11,2.71,1.1,0.01,">1 nonsynonymous","T100N S129L",2
"lib1","SARS-CoV-2","AGGCGAGAGTTTAAAA",2,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K V20G V103H K128H V153A",5
"lib1","SARS-CoV-2","AGGCGAGATACACATA",4,24.6,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","D68A S113E N151T G174R",4
"lib1","SARS-CoV-2","AGGCGAGCCAGGCAAG",3,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135S P161A",2
"lib1","SARS-CoV-2","AGGCGAGTCCTGCTTG",1,36.5,10.7,-0.07,0.07,2.9,1.02,0,">1 nonsynonymous","L5M D90S",2
"lib1","SARS-CoV-2","AGGCGCACTCTTTACC",2,39.65,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3S G9S R25W S41R T63L W106S T148K",7
"lib1","SARS-CoV-2","AGGCGCGGTTGAAAAC",9,64.49,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D59Y I72Y R78L Y91K",4
"lib1","SARS-CoV-2","AGGCGCGTAAAGAAGG",1,46.47,10.05,-0.71,0.13,2.29,1.12,0.01,">1 nonsynonymous","W106L Q168H",2
"lib1","SARS-CoV-2","AGGCGCGTCCATAGTA",4,17.1,6.13,-4.64,0.98,1.5,1.18,0.03,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","AGGCGGAATATGAGGC",6,36.73,10.93,0.17,0.09,2.96,1,0,">1 nonsynonymous","V37L T85S T201M",3
"lib1","SARS-CoV-2","AGGCGGACAACACGGC",6,90.51,10.76,0,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCGGAGCCTGTGAT",4,152.88,10.52,-0.25,0.05,2.89,1.04,0,">1 nonsynonymous","R27Q G155R",2
"lib1","SARS-CoV-2","AGGCGGTTACTACTCG",3,36.76,6,-4.76,1.57,1.5,1.17,0.02,">1 nonsynonymous","D59Y Y91W G116R F167K",4
"lib1","SARS-CoV-2","AGGCGTACAATTCCCA",2,66.2,10.52,-0.25,0.16,2.77,1.02,0.01,">1 nonsynonymous","L122M K132L",2
"lib1","SARS-CoV-2","AGGCGTAGAGAAAGTC",2,32.14,10.85,0.09,0.09,2.98,1,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","AGGCGTATTTAAAACT",1,24.22,10.61,-0.15,0.09,2.82,1.1,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","AGGCGTCCCCATCGTA",6,35.66,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N4H Y35F Y91A V180S T201I",5
"lib1","SARS-CoV-2","AGGCGTGAACTTTATG",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A42C T148A",3
"lib1","SARS-CoV-2","AGGCGTGTGGGCCGCT",2,4.52,NA,NA,NA,NA,NA,NA,"stop","I88Y L131* G155P",3
"lib1","SARS-CoV-2","AGGCGTTCCCATCTAC",6,38.94,6.2,-4.56,0.78,1.5,1.18,0.02,">1 nonsynonymous","P7M S45P R136I P149G",4
"lib1","SARS-CoV-2","AGGCGTTCCTATGCAC",12,208.8,10.79,0.03,0.07,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGCTAACGGTAAGCA",1,17.2,10.24,-0.52,0.11,2.89,1,0.01,">1 nonsynonymous","T3Y I28V Y91F",3
"lib1","SARS-CoV-2","AGGCTAATAAAATCTG",1,23.71,6.66,-4.11,0.59,1.5,1.04,0.05,">1 nonsynonymous","Y66D D97L R127V",3
"lib1","SARS-CoV-2","AGGCTAATTTCAGTCA",1,31.05,6.91,-3.85,0.37,1.5,1.25,0.02,">1 nonsynonymous","N109D S147R V173I V181M",4
"lib1","SARS-CoV-2","AGGCTACACCGAACAG",9,94.49,9.8,-0.96,0.05,2.9,1.03,0,">1 nonsynonymous","D98V N151R F156S",3
"lib1","SARS-CoV-2","AGGCTACATCGAGAGT",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y S43P D98R S147T",4
"lib1","SARS-CoV-2","AGGCTACATGCCTAAG",4,81.18,10.79,0.02,0.06,2.92,1.05,0,">1 nonsynonymous","S29P S36N N171W",3
"lib1","SARS-CoV-2","AGGCTACCCCAAGTAT",1,8.77,9.68,-1.08,0.11,1.96,1.03,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","AGGCTACCTACCCACT",1,19.6,8.51,-2.26,0.11,2.01,1.1,0.01,">1 nonsynonymous","K26G P169Y",2
"lib1","SARS-CoV-2","AGGCTACGATCAATAA",3,84,10.54,-0.23,0.08,2.87,1,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","AGGCTAGAATCAAATT",1,42.88,10.77,0,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCTAGCTCAAGAGA",6,117.12,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L60I G83F K94W Y178I L188F",5
"lib1","SARS-CoV-2","AGGCTAGGAAGCCGAT",3,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30R S129G",2
"lib1","SARS-CoV-2","AGGCTAGGCTTCCAAC",9,69.24,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I2E V11A S45K L95R W106A Y143R",6
"lib1","SARS-CoV-2","AGGCTAGTACCGCTAT",2,28.58,9.19,-1.57,0.07,2.79,1.11,0,">1 nonsynonymous","P149L S164D",2
"lib1","SARS-CoV-2","AGGCTAGTGTAATTGA",3,24.27,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","D90S V103H",2
"lib1","SARS-CoV-2","AGGCTATAGAAGAACG",2,26.59,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K48E G117V S184P",3
"lib1","SARS-CoV-2","AGGCTATAGGAAATTT",6,41.26,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G101H W106C",2
"lib1","SARS-CoV-2","AGGCTATATAACCGCA",9,54.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R16V G51T L57N L95V I104T",5
"lib1","SARS-CoV-2","AGGCTATCTAAAAACC",16,29.32,8.88,-1.88,0.33,1.5,1,0.07,">1 nonsynonymous","L5R D34R A81T S200R",4
"lib1","SARS-CoV-2","AGGCTATCTTTTACTC",9,138.39,10.76,0,0.06,2.92,1.05,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","AGGCTATTCACAGCAG",2,5.46,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","T15G G101S R124D T140V",4
"lib1","SARS-CoV-2","AGGCTCAAATATTGGT",4,58.73,8.92,-1.85,0.11,2.75,1.09,0,">1 nonsynonymous","N1R Y119L P149T",3
"lib1","SARS-CoV-2","AGGCTCAATATGTCTG",2,32.15,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y39R G83N N92L N157I",4
"lib1","SARS-CoV-2","AGGCTCACGAAATAAG",3,12.77,9.41,-1.35,0.21,1.77,1.16,0.02,"1 nonsynonymous","F185R",1
"lib1","SARS-CoV-2","AGGCTCAGTAAACCGT",14,279.72,10.45,-0.32,0.05,2.93,1.03,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","AGGCTCATAGAATATG",2,41.99,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G172W V180L",2
"lib1","SARS-CoV-2","AGGCTCATCTCTTGCC",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L W106R N120S G146F",4
"lib1","SARS-CoV-2","AGGCTCATTGTAGTGG",1,28.29,8.68,-2.09,0.14,2.71,1.04,0.01,">1 nonsynonymous","I104F S113P",2
"lib1","SARS-CoV-2","AGGCTCCCTGACGAAT",13,114.19,8.34,-2.42,0.34,1.5,1.01,0.04,"1 nonsynonymous","A105E",1
"lib1","SARS-CoV-2","AGGCTCCGCTGACAGG",14,99.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T15I D90S A145Q G166H T201M",5
"lib1","SARS-CoV-2","AGGCTCCTGACTTCCA",5,52.32,10.1,-0.66,0.09,2.71,1.06,0,">1 nonsynonymous","S129Y G152V",2
"lib1","SARS-CoV-2","AGGCTCGATCATCAAA",15,168.25,9.84,-0.93,0.09,2.3,1.06,0,">1 nonsynonymous","C6F T15Y S41T T63R",4
"lib1","SARS-CoV-2","AGGCTCGCTCGACTAA",7,64.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1Y V37K F44T N92I R124K P149E T201L",7
"lib1","SARS-CoV-2","AGGCTCTATCCTTAGA",3,53.22,9.81,-0.95,0.06,2.87,1.04,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","AGGCTCTTGAGAAGTT",4,125.49,9.99,-0.77,0.1,2.56,1.01,0,">1 nonsynonymous","Q84M D90I T201S",3
"lib1","SARS-CoV-2","AGGCTGAAAGGTTATT",3,56.3,8.27,-2.49,0.16,2.52,1.11,0.01,">1 nonsynonymous","V37K T100N Y143A",3
"lib1","SARS-CoV-2","AGGCTGAACAACCCGT",4,0.34,NA,NA,NA,NA,NA,NA,"stop","F12V I80L G86Y G116* Q144P P197K",6
"lib1","SARS-CoV-2","AGGCTGAACAACGACT",1,11.97,10.72,-0.05,0.08,2.83,1.17,0,">1 nonsynonymous","R16W N40R N110S T201G",4
"lib1","SARS-CoV-2","AGGCTGAACACAAAGT",1,24.23,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","T55L Y159S",2
"lib1","SARS-CoV-2","AGGCTGCCGATCATTC",3,22.25,6.49,-4.27,0.5,2.23,1.12,0,">1 nonsynonymous","R25S V103G A145M H189A",4
"lib1","SARS-CoV-2","AGGCTGCTTCCACAGC",2,19.45,9.63,-1.13,0.15,2.1,1.11,0.01,"1 nonsynonymous","Y165I",1
"lib1","SARS-CoV-2","AGGCTGGAAATTAGCA",17,314.23,10.36,-0.4,0.04,2.84,1.03,0,">1 nonsynonymous","N4M N64G T148L",3
"lib1","SARS-CoV-2","AGGCTGGGGCACGGTT",5,19.54,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","D68L L111C G152R",3
"lib1","SARS-CoV-2","AGGCTGTAAACTGACT",2,21.26,10.77,0.01,0.07,2.83,1.04,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","AGGCTGTAGTTACTTA",1,11.06,10.38,-0.39,0.13,2.92,1.07,0.01,">1 nonsynonymous","K128P S139N",2
"lib1","SARS-CoV-2","AGGCTGTATATCTAGT",11,126.12,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L38S T46V A105C S113W K128L F167L",6
"lib1","SARS-CoV-2","AGGCTGTCACTTTAAA",2,94.18,9.78,-0.98,0.04,2.87,1.08,0,"1 nonsynonymous","Q168E",1
"lib1","SARS-CoV-2","AGGCTTAACTATGTTG",6,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F E141S K199Y",3
"lib1","SARS-CoV-2","AGGCTTAATAGTCACT",4,19.89,10.41,-0.35,0.11,2.82,1.05,0.02,">1 nonsynonymous","K56S N151T F160L",3
"lib1","SARS-CoV-2","AGGCTTATGAAAAATA",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F I138M T170L",3
"lib1","SARS-CoV-2","AGGCTTATTAAATTGG",5,39.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G152I N157V",2
"lib1","SARS-CoV-2","AGGCTTCACGAACTTA",3,45.77,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A33R V77R K87T N118L R124G N130G I142S N151L",8
"lib1","SARS-CoV-2","AGGCTTCGAGTTCCAT",3,81.81,10.6,-0.17,0.06,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGCTTCGTCCTCTGT",3,45.67,8.59,-2.17,0.15,1.53,1.13,0.01,">1 nonsynonymous","L38T L60A Y121L",3
"lib1","SARS-CoV-2","AGGCTTCTAATCTAAT",3,6.99,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","S41A V77N Y143I",3
"lib1","SARS-CoV-2","AGGCTTCTATCCAAAA",2,29.79,10.46,-0.31,0.09,2.8,1.03,0,"1 nonsynonymous","R136V",1
"lib1","SARS-CoV-2","AGGCTTGAATGAGTAG",4,57.92,6.25,-4.51,0.32,1.5,1.12,0.01,">1 nonsynonymous","N120S T140Q N157I",3
"lib1","SARS-CoV-2","AGGCTTGCCCTAGAAC",1,61.27,9.92,-0.84,0.12,1.87,1.08,0.01,">1 nonsynonymous","A89Y K132L",2
"lib1","SARS-CoV-2","AGGCTTGGCGCGAACA",13,159.56,10.68,-0.08,0.04,2.92,1.02,0,">1 nonsynonymous","S41Q K56L",2
"lib1","SARS-CoV-2","AGGCTTGTATCATTGA",4,65.51,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","I2M R16C F99G S139L N157A",5
"lib1","SARS-CoV-2","AGGCTTTAAACCACAT",7,85.06,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F8C G86M L125R F160I",4
"lib1","SARS-CoV-2","AGGCTTTAACAAATGT",1,6,10.31,-0.45,0.18,2.69,1.06,0.01,">1 nonsynonymous","P54Y A89V",2
"lib1","SARS-CoV-2","AGGCTTTAGCTGTAAG",2,3.96,NA,NA,NA,NA,NA,NA,"stop","P82A V153*",2
"lib1","SARS-CoV-2","AGGCTTTCATCAGCTA",2,17.19,6,-4.76,2,1.5,1.25,0.08,">1 nonsynonymous","G51I D112I R127M S139D",4
"lib1","SARS-CoV-2","AGGCTTTTCCAACGCA",2,33.37,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86F A145G C150L",3
"lib1","SARS-CoV-2","AGGGAAAAACGACCAG",7,92,10.74,-0.02,0.07,2.89,1.07,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","AGGGAAAAAGAACTAT",1,16.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T85A W106L V115R S129A G155S",5
"lib1","SARS-CoV-2","AGGGAAAAATGAGAAG",3,53.18,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N40V C61S G155N F167L K199N",5
"lib1","SARS-CoV-2","AGGGAAAAATTTACCT",11,107.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55L P161V G172T",3
"lib1","SARS-CoV-2","AGGGAAAACCAATATT",1,32.07,6,-4.76,1.65,1.87,1.15,0,">1 nonsynonymous","K56S A89Q Y121T S200L",4
"lib1","SARS-CoV-2","AGGGAAAAGTATTCGC",2,10.42,6,-4.76,1.62,1.63,1.13,0,">1 nonsynonymous","N40L C49L R73T I88K D112E",5
"lib1","SARS-CoV-2","AGGGAAAATATTTGAT",2,53.56,9.68,-1.09,0.17,2.03,1.12,0.01,">1 nonsynonymous","P7M Y39M C61F A105T V173F",5
"lib1","SARS-CoV-2","AGGGAAAATGATGCGC",2,1.58,NA,NA,NA,NA,NA,NA,"stop","R16* F44T V103C",3
"lib1","SARS-CoV-2","AGGGAAAATTACTCTA",2,64.35,10.69,-0.07,0.06,2.9,1.07,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","AGGGAAAGCCTAGCCT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","F44* G51V G74M N92I E186T",5
"lib1","SARS-CoV-2","AGGGAAATATCTTAAT",2,34.01,10.76,-0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGAACAAAAGAACG",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y G83Y C150L F167I",4
"lib1","SARS-CoV-2","AGGGAACATCTTAGAG",5,0.35,NA,NA,NA,NA,NA,NA,"stop","K87* D98Y D112F G174S T201R",5
"lib1","SARS-CoV-2","AGGGAACATTATAGTA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","W106L Y119*",2
"lib1","SARS-CoV-2","AGGGAACCTAAGAACC",3,35.33,10.52,-0.24,0.08,2.88,1.02,0,">1 nonsynonymous","D59E A105G V173A",3
"lib1","SARS-CoV-2","AGGGAACCTTCTCATC",3,70.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T15V V37P G51P W106D Y119S P161L",6
"lib1","SARS-CoV-2","AGGGAACGGAGATCCG",3,56.25,10.76,-0.01,0.06,2.94,1.03,0,"1 nonsynonymous","Y91F",1
"lib1","SARS-CoV-2","AGGGAACTACCCTCCG",4,84.56,10.53,-0.24,0.06,2.91,1.04,0,">1 nonsynonymous","K56Y E141S",2
"lib1","SARS-CoV-2","AGGGAACTATAATTTC",5,125.05,8.79,-1.98,0.09,2.85,1.11,0,"1 nonsynonymous","N157E",1
"lib1","SARS-CoV-2","AGGGAAGAAAACAATT",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151L L188R T201R",3
"lib1","SARS-CoV-2","AGGGAAGATTGAATCC",1,49.46,6.43,-4.34,0.52,1.5,1.08,0.02,">1 nonsynonymous","I72F V77H N107S Y175M",4
"lib1","SARS-CoV-2","AGGGAAGCACCATAAA",10,118.7,9.97,-0.8,0.07,2.39,1.05,0,">1 nonsynonymous","Y91S V153L",2
"lib1","SARS-CoV-2","AGGGAATCTAAGTGTT",4,33.68,10.8,0.03,0.1,2.97,1.03,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","AGGGAATCTTCAAGCA",10,78.15,10.86,0.1,0.09,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGAATTAAGCTTAA",2,67.92,10.33,-0.43,0.07,1.98,1.02,0,">1 nonsynonymous","S69L Q168W",2
"lib1","SARS-CoV-2","AGGGAATTGAACGGAG",2,27.48,10.56,-0.21,0.07,2.9,1,0,"1 nonsynonymous","K87P",1
"lib1","SARS-CoV-2","AGGGACAAGCCTAAGG",1,23.44,8.83,-1.93,0.39,1.5,1,0.06,">1 nonsynonymous","W23S N64F V77L",3
"lib1","SARS-CoV-2","AGGGACAATGAGTCCC",3,156.42,6.03,-4.74,1.06,1.5,1.24,0.02,">1 nonsynonymous","N58A W106I F167V Y178K",4
"lib1","SARS-CoV-2","AGGGACACATCCTGTC",2,6.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I N40V L57A S129V",4
"lib1","SARS-CoV-2","AGGGACCAATAGAGCT",3,66.82,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T46L N64P Y91T G116L P133R V173I R179N",7
"lib1","SARS-CoV-2","AGGGACCCTACAGAAA",5,55.2,8.93,-1.83,0.22,1.5,1.18,0.02,">1 nonsynonymous","N64H S69R T85S E135S",4
"lib1","SARS-CoV-2","AGGGACCCTCAGCCAC",5,38.66,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5Y F44C C49R R78C E135L",5
"lib1","SARS-CoV-2","AGGGACCCTCTTCTAT",4,14.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E K94Y K114P E141A P149H G155A",6
"lib1","SARS-CoV-2","AGGGACCGATTATAAT",2,33.9,10.89,0.13,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGACCTCGGCATGG",7,125.33,10.76,0,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGACCTTCTCTCAT",2,7.21,10.84,0.07,0.07,3,1.01,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","AGGGACGATTTGATCA",4,69.82,10.8,0.03,0.04,2.93,1.02,0,">1 nonsynonymous","V173I K198Q",2
"lib1","SARS-CoV-2","AGGGACGGCGGGCCTT",3,102.18,10.73,-0.04,0.04,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGACTAAATGCAAT",3,10.72,9.62,-1.15,0.29,1.59,1.07,0.02,">1 nonsynonymous","F17L N120Y Q168R",3
"lib1","SARS-CoV-2","AGGGACTATTTTTCTT",10,2.33,NA,NA,NA,NA,NA,NA,"stop","T3I Y35N S139K T170*",4
"lib1","SARS-CoV-2","AGGGACTGGTTAAAGC",5,34.7,7.24,-3.52,0.35,1.5,1.08,0.04,">1 nonsynonymous","C49K S53T R73S G146V Y165K",5
"lib1","SARS-CoV-2","AGGGACTTCCGAAAGT",2,31.75,10.91,0.14,0.08,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGGAGAAGAACAGAC",7,52.06,6.85,-3.91,0.45,1.5,1.12,0.03,">1 nonsynonymous","S53H A67H Y91E E141S P149C G155S",6
"lib1","SARS-CoV-2","AGGGAGAATAACATAA",2,15.42,8.61,-2.15,0.13,2.33,1.03,0.02,">1 nonsynonymous","P133V G166R",2
"lib1","SARS-CoV-2","AGGGAGACATTCAACG",14,123.66,10.72,-0.05,0.06,2.92,1.04,0,">1 nonsynonymous","F134G A192K",2
"lib1","SARS-CoV-2","AGGGAGACGCAGTGCT",3,26.61,9.28,-1.48,0.09,1.85,1.11,0,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","AGGGAGAGGTCGTTAG",3,77.63,10.74,-0.02,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGAGATCCTTAGAA",2,13.46,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","T63V V180Q",2
"lib1","SARS-CoV-2","AGGGAGCATATTTAAG",4,56.2,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","K56E Y119I F167S",3
"lib1","SARS-CoV-2","AGGGAGCCACGTACAT",8,93.46,8.17,-2.6,0.17,2.31,1.11,0.01,">1 nonsynonymous","D90L G166E",2
"lib1","SARS-CoV-2","AGGGAGCGGCTGAACA",7,55.1,6.39,-4.38,0.46,1.5,1.15,0.02,">1 nonsynonymous","Y93N E141V",2
"lib1","SARS-CoV-2","AGGGAGCTGCAAGCCT",1,47.25,10.1,-0.66,0.07,2.58,1.01,0,">1 nonsynonymous","Y35D A42F N64K",3
"lib1","SARS-CoV-2","AGGGAGGAATAAGCTA",4,27.25,10.67,-0.1,0.11,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGAGGACAAACAAA",7,65.33,10.76,-0.01,0.12,2.88,1.09,0.01,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","AGGGAGGACCCAACCC",2,0.24,NA,NA,NA,NA,NA,NA,"stop","V52Y G155C S200*",3
"lib1","SARS-CoV-2","AGGGAGGATAAAACAT",3,4.13,NA,NA,NA,NA,NA,NA,"stop","L57T R136S S200*",3
"lib1","SARS-CoV-2","AGGGAGGATCTAGCCA",1,22.23,6,-4.76,1.18,3,1.12,0,">1 nonsynonymous","V103M G166T",2
"lib1","SARS-CoV-2","AGGGAGGGACCTGTCA",3,98.55,8.55,-2.22,0.12,2.9,1.02,0.01,">1 nonsynonymous","L5T N157K",2
"lib1","SARS-CoV-2","AGGGAGTAAGCCTAGC",4,105.84,6,-4.76,1.94,1.5,1.15,0.01,">1 nonsynonymous","S41P S69R Y93L F167G",4
"lib1","SARS-CoV-2","AGGGAGTACCACCAAT",1,17.64,9.96,-0.8,0.18,2.58,1.02,0.01,">1 nonsynonymous","C6L D97L C195L",3
"lib1","SARS-CoV-2","AGGGAGTATATAGAAC",3,24.99,9.66,-1.1,0.1,2.2,1.03,0.01,">1 nonsynonymous","N13W G116V K198S",3
"lib1","SARS-CoV-2","AGGGAGTTACCACAAA",12,159.52,10.07,-0.69,0.05,2.97,1,0,">1 nonsynonymous","D75E K87N",2
"lib1","SARS-CoV-2","AGGGAGTTTTGGGAAC",5,79.13,9.13,-1.64,0.07,2.76,1.17,0,"1 nonsynonymous","F156E",1
"lib1","SARS-CoV-2","AGGGATAAAGTAAAGC",5,74.53,9.02,-1.74,0.06,2.83,1.08,0,">1 nonsynonymous","N58M G166M",2
"lib1","SARS-CoV-2","AGGGATACAAATGCTT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T V65F G166M",3
"lib1","SARS-CoV-2","AGGGATACATAGGAGG",2,23.14,8.02,-2.75,0.23,1.68,1.22,0.02,">1 nonsynonymous","G51C D90H T201V",3
"lib1","SARS-CoV-2","AGGGATACTGAAAACC",2,81.83,8.81,-1.95,0.08,2.66,1.08,0,">1 nonsynonymous","I2A R27G K87T G146Y T201M",5
"lib1","SARS-CoV-2","AGGGATATGTATGTAT",4,53.3,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S108C F134P T140N",3
"lib1","SARS-CoV-2","AGGGATCACGTCTCTA",1,54.96,8.16,-2.61,0.21,2.05,1.21,0.02,">1 nonsynonymous","S29T C61G Y143S T148Q",4
"lib1","SARS-CoV-2","AGGGATCAGTCAGGAC",4,0.47,NA,NA,NA,NA,NA,NA,"stop","I2L P7V A42R F62* Y91C S113F",6
"lib1","SARS-CoV-2","AGGGATCCATTGCAAG",13,1.71,NA,NA,NA,NA,NA,NA,"stop","G9* A22T K56* T63M T85K G116H Y159R Y165N",8
"lib1","SARS-CoV-2","AGGGATCCTCAACCTA",1,9.1,10.14,-0.62,0.12,2.14,1,0.01,"1 nonsynonymous","D34I",1
"lib1","SARS-CoV-2","AGGGATGTCTCTTTCT",8,122.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38Q D98G R136G G174S",4
"lib1","SARS-CoV-2","AGGGATTCTTGGGGTC",1,29.49,10.63,-0.13,0.07,2.86,1.08,0,"1 nonsynonymous","A190V",1
"lib1","SARS-CoV-2","AGGGATTGAAGAGGGA",2,36.21,8.68,-2.08,0.1,2.82,1,0.01,">1 nonsynonymous","G9T S113V",2
"lib1","SARS-CoV-2","AGGGCAAAGTTATATA",4,30.75,9.69,-1.07,0.1,2.06,1.05,0,">1 nonsynonymous","D90L N107S",2
"lib1","SARS-CoV-2","AGGGCAAATAAACTTA",1,75.17,10.88,0.11,0.06,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGCAAGAAATCAAT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M G86E T100S K132S I138Y",5
"lib1","SARS-CoV-2","AGGGCAATTGACCTAG",4,29.38,9.87,-0.9,0.11,2.12,1.11,0.01,">1 nonsynonymous","Y35S K56I T85G P197K",4
"lib1","SARS-CoV-2","AGGGCACAAGCATGAT",3,87.52,10.73,-0.04,0.04,2.99,1,0,"1 nonsynonymous","R27Y",1
"lib1","SARS-CoV-2","AGGGCACAGTTTTATA",4,26.92,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6L N107Y N130I",3
"lib1","SARS-CoV-2","AGGGCACGATCAAGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* S41M V115S V181A",4
"lib1","SARS-CoV-2","AGGGCACTGCTAATTT",1,11.47,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","R124Q",1
"lib1","SARS-CoV-2","AGGGCACTTAGAACTG",12,221.04,10.49,-0.27,0.03,2.93,1.02,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","AGGGCAGAAAGGTTTA",2,0.38,NA,NA,NA,NA,NA,NA,"stop","S19K V52R Y119* G166Y",4
"lib1","SARS-CoV-2","AGGGCATAAAAGTAAA",3,77.64,10.49,-0.28,0.04,2.92,1,0,">1 nonsynonymous","C61R G83F N120Y",3
"lib1","SARS-CoV-2","AGGGCATCTAGTTGCG",3,52.65,9.91,-0.85,0.11,2.4,1.02,0,">1 nonsynonymous","V32E S45T F47M F62T",4
"lib1","SARS-CoV-2","AGGGCATCTTTACGGG",6,75.39,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","Y93Q N107W S129I",3
"lib1","SARS-CoV-2","AGGGCATGAACCTTCT",4,180.13,10.76,0,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGCATTTATACGTT",3,73.02,10.64,-0.12,0.05,2.99,1,0,">1 nonsynonymous","D98S K128P S139T",3
"lib1","SARS-CoV-2","AGGGCCAACGCGGAAT",6,31.41,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F44I T55S Y119C L131P V153W",5
"lib1","SARS-CoV-2","AGGGCCATTGATCCTA",6,45.94,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A14D P82R Y119D",3
"lib1","SARS-CoV-2","AGGGCCCCGAAAGGCC",3,85.07,6.31,-4.46,0.81,1.5,1.25,0.05,">1 nonsynonymous","R25I C49G D59A Q176A",4
"lib1","SARS-CoV-2","AGGGCCCGCAATGAAA",6,56.85,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A18Q S45I V71E I104N T148D",5
"lib1","SARS-CoV-2","AGGGCCCTTGAAAAAT",1,21.86,10.73,-0.04,0.07,2.85,1.1,0,"1 nonsynonymous","S164R",1
"lib1","SARS-CoV-2","AGGGCCGAACGAGAGT",6,77.58,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y39L C158R Y165M",3
"lib1","SARS-CoV-2","AGGGCCGGCGGATTTA",7,176.02,10.55,-0.21,0.03,2.92,1.02,0,"1 nonsynonymous","A14N",1
"lib1","SARS-CoV-2","AGGGCCTACCAGAACC",11,70.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G101S F134E T170A",3
"lib1","SARS-CoV-2","AGGGCGAAATTATGCT",2,34.76,9.34,-1.43,0.17,2.01,1.04,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","AGGGCGACAACCCTGA",9,147.2,10.3,-0.46,0.03,2.93,1.02,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","AGGGCGATGAGCGATC",2,26.97,10.14,-0.63,0.18,2.3,1.03,0.01,">1 nonsynonymous","C49F N58R",2
"lib1","SARS-CoV-2","AGGGCGCGTTGACTTA",1,35.41,6,-4.76,1.88,1.5,1.23,0.03,">1 nonsynonymous","T63M R127I T201S",3
"lib1","SARS-CoV-2","AGGGCGGATCACATGG",3,20.88,10.76,-0.01,0.05,2.87,1.09,0,">1 nonsynonymous","V37S S45A",2
"lib1","SARS-CoV-2","AGGGCGGGAACAAATC",3,37.97,9.83,-0.93,0.13,2.1,1.03,0.01,">1 nonsynonymous","N4Q Y91I L122N S147F",4
"lib1","SARS-CoV-2","AGGGCGGTACCGCGTA",5,107.18,10.02,-0.75,0.11,2.45,1,0,">1 nonsynonymous","S139A Y178S",2
"lib1","SARS-CoV-2","AGGGCTAACTTTATAT",5,0.25,NA,NA,NA,NA,NA,NA,"stop","F12* C61W D97I R127T",4
"lib1","SARS-CoV-2","AGGGCTACAGAGTCCT",1,2.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGGGCTACTTTAACAA",3,43.4,9.88,-0.89,0.1,1.86,1.05,0,">1 nonsynonymous","L5E C49Y",2
"lib1","SARS-CoV-2","AGGGCTAGTAAGACCT",3,45.38,10.86,0.09,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGCTATAAGCTACT",11,75.97,9.16,-1.6,0.2,1.86,1.13,0.02,">1 nonsynonymous","S19L S200F",2
"lib1","SARS-CoV-2","AGGGCTCAAACTACTT",2,146.84,9.94,-0.82,0.09,2.12,1.06,0,">1 nonsynonymous","V37L T46N L60K E141R P149S",5
"lib1","SARS-CoV-2","AGGGCTCATTAAAACC",2,30.82,10.46,-0.3,0.07,2.87,1.09,0,">1 nonsynonymous","R27M C61T",2
"lib1","SARS-CoV-2","AGGGCTCATTCGATGA",4,35.26,10.62,-0.14,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGCTCCCCTACTAA",6,88.42,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T55L F70S D90S D112I R124V P149T",6
"lib1","SARS-CoV-2","AGGGCTGAAGGACGGG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V182S K199R",2
"lib1","SARS-CoV-2","AGGGCTTCAAGTAAAA",6,455.26,10.55,-0.21,0.03,2.93,1,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","AGGGCTTCGTAACACC",1,4.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","AGGGCTTTAGAACTAG",3,9.26,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G146I G155V Q163T",3
"lib1","SARS-CoV-2","AGGGCTTTTGAAAAAT",5,44.85,10.15,-0.61,0.07,2.77,1.05,0,">1 nonsynonymous","N107A K128S",2
"lib1","SARS-CoV-2","AGGGGAACAAATATAA",5,40.72,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T100E Y119C S139F",3
"lib1","SARS-CoV-2","AGGGGAACCTTTAGCG",2,41.23,10.63,-0.13,0.06,2.92,1.03,0,">1 nonsynonymous","Q84G E141F",2
"lib1","SARS-CoV-2","AGGGGAAGATCTGACT",2,0,NA,NA,NA,NA,NA,NA,"stop","T3W R25K D68V A105G S147M K198*",6
"lib1","SARS-CoV-2","AGGGGAATTCAGTTGT",1,16.23,10.45,-0.32,0.08,2.83,1.16,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","AGGGGAGAAAAAACCT",5,20.91,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20M R73A V103M V173G",4
"lib1","SARS-CoV-2","AGGGGAGATGAAGAAA",2,16.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3N A105R",2
"lib1","SARS-CoV-2","AGGGGAGGGTGAACCC",18,220.9,10.13,-0.64,0.07,2.6,1.02,0,">1 nonsynonymous","S36V R136C",2
"lib1","SARS-CoV-2","AGGGGAGTACAAACAC",3,1.67,NA,NA,NA,NA,NA,NA,"stop","E10Y I72* F160L",3
"lib1","SARS-CoV-2","AGGGGATCAATGTTCC",2,16.66,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49L D98S N109K G116S",4
"lib1","SARS-CoV-2","AGGGGATTAAATTCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","D97P G117T E141* P149K N157K",5
"lib1","SARS-CoV-2","AGGGGCATATAGATAC",8,43.28,8.25,-2.51,0.35,1.5,1.07,0.05,">1 nonsynonymous","I80R T85D D97Q I104R F134W Q144S",6
"lib1","SARS-CoV-2","AGGGGCCACCTATTTC",3,8.85,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A14K D98I W106L",3
"lib1","SARS-CoV-2","AGGGGCCCAACCTTAG",2,78.26,10.6,-0.16,0.06,2.95,1.03,0,">1 nonsynonymous","D97L K132N",2
"lib1","SARS-CoV-2","AGGGGCGACACGGAAA",1,42.49,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C158I P169N",2
"lib1","SARS-CoV-2","AGGGGCGACAGATGCT",2,10.04,6.16,-4.6,1.24,1.5,1.2,0.07,">1 nonsynonymous","K56N Q79A W106S",3
"lib1","SARS-CoV-2","AGGGGCGCCCAGACAA",6,92.64,7.7,-3.07,0.14,1.52,1.12,0.01,">1 nonsynonymous","K48R Y119V P149G G155V",4
"lib1","SARS-CoV-2","AGGGGCGCCCAGCGAC",2,297.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P177M K199R",2
"lib1","SARS-CoV-2","AGGGGCGGTCGTTTCG",1,90.85,6.26,-4.51,0.46,1.5,1.1,0.01,"1 nonsynonymous","Y159K",1
"lib1","SARS-CoV-2","AGGGGCTCCCTCACGA",7,74.19,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C6T L95E L122W P149H V153R H189P",6
"lib1","SARS-CoV-2","AGGGGCTGGTAAAATA",2,15.63,8.97,-1.8,0.37,1.5,1.07,0.04,">1 nonsynonymous","N4Y D34S L60I T85P",4
"lib1","SARS-CoV-2","AGGGGGACCGACAAAT",1,0.65,NA,NA,NA,NA,NA,NA,"stop","R27* P96T",2
"lib1","SARS-CoV-2","AGGGGGACTCTTTACA",1,45.87,8.54,-2.23,0.11,2.71,1.04,0,">1 nonsynonymous","G83C S129I Y143V N171A",4
"lib1","SARS-CoV-2","AGGGGGCCAGCTAAGT",1,51.24,8.73,-2.04,0.19,1.94,1.16,0.02,">1 nonsynonymous","T3G F160I Q176H",3
"lib1","SARS-CoV-2","AGGGGGCCCTTATAGT",1,12.09,6.4,-4.36,0.94,1.5,1.16,0.02,">1 nonsynonymous","R25Y A190L",2
"lib1","SARS-CoV-2","AGGGGGCTCATAGTTA",4,2.99,NA,NA,NA,NA,NA,NA,"stop","N4P D90H L122P Q144*",4
"lib1","SARS-CoV-2","AGGGGGGTCCACAATG",3,99.22,10.85,0.08,0.07,2.86,1.06,0,">1 nonsynonymous","S113A L122R",2
"lib1","SARS-CoV-2","AGGGGGTATCCGATTA",3,0.77,NA,NA,NA,NA,NA,NA,"stop","K26T G51* C195L",3
"lib1","SARS-CoV-2","AGGGGGTTACTTAATA",5,32.24,10.16,-0.6,0.08,2.57,1.06,0,">1 nonsynonymous","N1P S45N D90K C195M",4
"lib1","SARS-CoV-2","AGGGGTAGTAAATACA",2,24.82,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","L95R F167L",2
"lib1","SARS-CoV-2","AGGGGTATAGTCATAT",6,132.12,8.1,-2.67,0.11,2.05,1.13,0,">1 nonsynonymous","F12L S36F L60E T170E",4
"lib1","SARS-CoV-2","AGGGGTCAGCAGGAGG",6,137.32,10.14,-0.62,0.07,2.08,1.02,0,">1 nonsynonymous","W106T E141Q Q163K",3
"lib1","SARS-CoV-2","AGGGGTGAGACAAGGC",1,50.96,10.61,-0.16,0.06,2.97,1,0,">1 nonsynonymous","N58T A192T",2
"lib1","SARS-CoV-2","AGGGGTTCGAAAATTA",13,99.95,10.78,0.02,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGTAAACATTATGA",3,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71G I88R K114L L131F P161L",5
"lib1","SARS-CoV-2","AGGGTAAACTAAGCGA",2,19,6,-4.76,0.71,3,1.12,0.01,">1 nonsynonymous","N13D A89L",2
"lib1","SARS-CoV-2","AGGGTAAATACATAGC",1,11.22,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","I88Q P96H C102D V173H",4
"lib1","SARS-CoV-2","AGGGTAAATGTATGAG",1,2.76,NA,NA,NA,NA,NA,NA,"stop","N24I Y35L C49Q K114S N157*",5
"lib1","SARS-CoV-2","AGGGTAACAACCTTAT",3,53.83,9.44,-1.33,0.06,2.86,1.06,0,">1 nonsynonymous","R16S V32L Y119G",3
"lib1","SARS-CoV-2","AGGGTAACCGCCATGC",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E A81L L95P P161Y",4
"lib1","SARS-CoV-2","AGGGTAACTCGTAACG",3,11.57,10.95,0.19,0.1,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGTAAGCTGAGTAT",5,55.42,9.12,-1.64,0.2,1.5,1.07,0.02,">1 nonsynonymous","Y50L K56R",2
"lib1","SARS-CoV-2","AGGGTAAGGAAATCAG",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21H K87S I138T L162R F167L",5
"lib1","SARS-CoV-2","AGGGTAATGTCCTGAG",5,63.18,8.66,-2.1,0.09,1.73,1.1,0,">1 nonsynonymous","F12Y T100K G174R",3
"lib1","SARS-CoV-2","AGGGTAATTACTCAGG",5,30.05,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12H C49Q",2
"lib1","SARS-CoV-2","AGGGTAATTCAAATAA",4,151.34,8.55,-2.21,0.13,1.96,1.13,0.01,">1 nonsynonymous","I28Y D112C A192L",3
"lib1","SARS-CoV-2","AGGGTACAATATTATT",5,90.8,9.38,-1.39,0.14,1.58,1.17,0.01,">1 nonsynonymous","D98G A105G P149Y",3
"lib1","SARS-CoV-2","AGGGTACAGGGAATGA",4,99.93,10.21,-0.56,0.06,2.9,1.01,0,">1 nonsynonymous","I2L K56F S129C",3
"lib1","SARS-CoV-2","AGGGTAGATATCCCCT",10,4.01,NA,NA,NA,NA,NA,NA,"stop","K87* W106R S113I G146R V182I",5
"lib1","SARS-CoV-2","AGGGTAGGAGAATATT",3,47.36,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S41P T85Y L95K A105S P149R",5
"lib1","SARS-CoV-2","AGGGTATAAATAACTT",1,82.96,9.92,-0.84,0.06,2.7,1.07,0,">1 nonsynonymous","C6A T55W",2
"lib1","SARS-CoV-2","AGGGTATAACACATAA",3,27.96,9.82,-0.94,0.21,1.71,1.15,0.03,">1 nonsynonymous","T15C P96A",2
"lib1","SARS-CoV-2","AGGGTATCGCTCAGCA",2,9.51,9.04,-1.72,0.39,1.5,1.21,0.06,">1 nonsynonymous","F70Y F99N",2
"lib1","SARS-CoV-2","AGGGTATCTGTAGTTT",5,0.35,NA,NA,NA,NA,NA,NA,"stop","D59E Y93* F99S Q168V",4
"lib1","SARS-CoV-2","AGGGTATGCGGCATAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A F12I F44C D90V V182P",5
"lib1","SARS-CoV-2","AGGGTATTAAAAATAT",8,23.97,6.31,-4.46,0.58,1.5,1.09,0.03,">1 nonsynonymous","T3S V20K Q144L",3
"lib1","SARS-CoV-2","AGGGTATTCAGGCAGC",4,103.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N40L I104C G116S K128W Y175S",5
"lib1","SARS-CoV-2","AGGGTCAAAGAGATCT",4,49.49,8.92,-1.84,0.18,1.7,1.16,0.01,">1 nonsynonymous","F8A F62G",2
"lib1","SARS-CoV-2","AGGGTCACCATATTCA",2,72.32,9.8,-0.96,0.04,2.85,1.07,0,"1 nonsynonymous","S164D",1
"lib1","SARS-CoV-2","AGGGTCACTGATTGAA",3,42.75,8.72,-2.05,0.14,2,1.11,0.01,">1 nonsynonymous","T3R Q84Y E154F",3
"lib1","SARS-CoV-2","AGGGTCATTGTTCGGA",1,25.05,10.77,0.01,0.05,2.95,1.01,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","AGGGTCCAAGAAGGGT",2,1.45,NA,NA,NA,NA,NA,NA,"stop","T55* S69M K128V C158L G166L",5
"lib1","SARS-CoV-2","AGGGTCCGCGAACAGA",17,119.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3C F17C D68Q",3
"lib1","SARS-CoV-2","AGGGTCGAACACAACA",2,42.18,10.42,-0.34,0.06,2.83,1.08,0,">1 nonsynonymous","F12L T55F",2
"lib1","SARS-CoV-2","AGGGTCGGTGACAAAA",3,1.76,NA,NA,NA,NA,NA,NA,"stop","T3E N24* V173S",3
"lib1","SARS-CoV-2","AGGGTCGTACGAAACA",2,33.04,10.06,-0.71,0.08,2.86,1.02,0,">1 nonsynonymous","R78W P133A F156Y",3
"lib1","SARS-CoV-2","AGGGTCTATGTGTTAG",2,58.46,9.67,-1.09,0.07,2.71,1.09,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","AGGGTCTGACGAGACC",2,12.19,8.59,-2.18,0.16,3,1.05,0.01,">1 nonsynonymous","Y39L G146S N157R",3
"lib1","SARS-CoV-2","AGGGTGAAATCGGAGC",5,134.39,10.79,0.03,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGGTGCAACATGAAT",4,0.67,NA,NA,NA,NA,NA,NA,"stop","T15N Y121V S129*",3
"lib1","SARS-CoV-2","AGGGTGCATGCACAAT",3,139.12,8.69,-2.07,0.12,1.92,1.13,0.01,">1 nonsynonymous","T140A Q176R L187R",3
"lib1","SARS-CoV-2","AGGGTGCCTTTTTAGG",7,54.75,8.75,-2.01,0.14,1.62,1.17,0.01,">1 nonsynonymous","F44K L60R A67F T201G",4
"lib1","SARS-CoV-2","AGGGTGGATCGCTGAC",4,67.78,10.75,-0.01,0.05,2.86,1.05,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","AGGGTGGTACAAGAAA",1,89.61,10.78,0.01,0.07,2.85,1.1,0,">1 nonsynonymous","L122R S200F",2
"lib1","SARS-CoV-2","AGGGTGTAAAAGAAAA",1,13.14,10.67,-0.09,0.07,2.86,1.13,0,">1 nonsynonymous","L125M T201A",2
"lib1","SARS-CoV-2","AGGGTGTACTTAAGAT",1,40.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183H",1
"lib1","SARS-CoV-2","AGGGTGTCATCTCCCG",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I V52A S129L F167Y",4
"lib1","SARS-CoV-2","AGGGTGTCCGACTCTG",2,49.12,10.76,0,0.06,2.98,1,0,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","AGGGTTAAAAGGAGAA",3,31.89,8.28,-2.48,0.27,1.65,1.18,0.03,">1 nonsynonymous","Y121L S129F G146F V173A",4
"lib1","SARS-CoV-2","AGGGTTAAAGAACGTA",7,55.71,7.71,-3.05,0.3,1.5,1.1,0.03,">1 nonsynonymous","A33R L60T R127S E154T",4
"lib1","SARS-CoV-2","AGGGTTAAGGGCATGT",2,2.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","AGGGTTACAACTAGAA",4,50.98,10.72,-0.04,0.06,2.97,1.01,0,">1 nonsynonymous","S43A I88V",2
"lib1","SARS-CoV-2","AGGGTTACTTCTAGGT",2,175.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5S T100D A105P V181N",4
"lib1","SARS-CoV-2","AGGGTTCAAAGCCTTA",5,184.76,10.44,-0.32,0.03,2.87,1.06,0,">1 nonsynonymous","K26S I138S",2
"lib1","SARS-CoV-2","AGGGTTCCATTTATAG",3,97.42,7.13,-3.64,0.27,1.5,1.14,0.02,">1 nonsynonymous","S43P N107I Q176L",3
"lib1","SARS-CoV-2","AGGGTTGGATTTTAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L V37L N107E E154C",4
"lib1","SARS-CoV-2","AGGGTTTACCAGGAGT",8,31.98,10.91,0.14,0.08,2.91,1.05,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","AGGGTTTATTCTATTA",2,47.6,10.09,-0.68,0.07,2.7,1.05,0,">1 nonsynonymous","L5R F8L A14V P149L",4
"lib1","SARS-CoV-2","AGGGTTTCAACCTAAG",6,101.1,10.16,-0.6,0.09,2.29,1.01,0,">1 nonsynonymous","I2F F44R K128L",3
"lib1","SARS-CoV-2","AGGGTTTCATAATGGG",2,10.9,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R16L N107K G146P",3
"lib1","SARS-CoV-2","AGGGTTTGCCACAGCT",3,37.93,6.18,-4.59,0.66,1.76,1.21,0.01,">1 nonsynonymous","I2V D34G G86F K94P",4
"lib1","SARS-CoV-2","AGGTAAAATCACATAG",1,14.18,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","K26E S41V I80K T85S P96M N151T",6
"lib1","SARS-CoV-2","AGGTAAACAGCCACTG",6,1.98,NA,NA,NA,NA,NA,NA,"stop","D90* F185I",2
"lib1","SARS-CoV-2","AGGTAAACAGTGATCA",2,12.63,10.68,-0.08,0.09,2.93,1.02,0.01,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","AGGTAAACATCAGTAG",2,27.42,10.71,-0.06,0.1,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTAAACTGCCTAAA",4,56.45,10.81,0.05,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTAAAGAATATAGA",6,124.96,8.34,-2.43,0.12,2.65,1.1,0.01,">1 nonsynonymous","S129T N157C",2
"lib1","SARS-CoV-2","AGGTAAATACCCATTA",5,119.62,9.96,-0.81,0.07,2.67,1.05,0,">1 nonsynonymous","T85A G155L",2
"lib1","SARS-CoV-2","AGGTAAATACCCCGTG",3,15.58,9.34,-1.42,0.41,1.5,1,0.07,"1 nonsynonymous","L183C",1
"lib1","SARS-CoV-2","AGGTAAATATCTACTT",6,156.14,10.35,-0.41,0.04,2.78,1.04,0,">1 nonsynonymous","F62Q K114M",2
"lib1","SARS-CoV-2","AGGTAAATCAAAGTGT",2,28.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59C A81L",2
"lib1","SARS-CoV-2","AGGTAAATGCTCTAAA",7,103.29,10.76,-0.01,0.06,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGTAACAAAAATCAT",4,54.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N1T D68K",2
"lib1","SARS-CoV-2","AGGTAACAAAAATTGT",6,22.35,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6A S36F T46V V103R Y121H L131W S164P T193A",8
"lib1","SARS-CoV-2","AGGTAACATTGGATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S Y91Q T100C G166W",4
"lib1","SARS-CoV-2","AGGTAACCCATAACAA",4,0.5,NA,NA,NA,NA,NA,NA,"stop","Y93C L162*",2
"lib1","SARS-CoV-2","AGGTAACCGCAAGACA",7,73.9,10.17,-0.59,0.08,2.31,1,0,"1 nonsynonymous","W23H",1
"lib1","SARS-CoV-2","AGGTAACGTAGTTAAG",1,46.74,10.19,-0.57,0.1,2.58,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","AGGTAACTATAAGAAG",6,91.68,10.14,-0.62,0.06,2.86,1.05,0,">1 nonsynonymous","C61S Y91I",2
"lib1","SARS-CoV-2","AGGTAACTCAAAGACA",9,63.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35P K48S D59C I80A K87V F167C",6
"lib1","SARS-CoV-2","AGGTAAGAAATTGACT",4,16.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46K G51C P149M",3
"lib1","SARS-CoV-2","AGGTAAGAAATTGTCG",2,35.48,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A33L V37A D90P Y119M S139N",5
"lib1","SARS-CoV-2","AGGTAAGCAAGTGGGA",3,48.32,10.73,-0.03,0.05,2.86,1.08,0,">1 nonsynonymous","L122R P197T",2
"lib1","SARS-CoV-2","AGGTAAGGATTGATTG",12,254.7,10.74,-0.03,0.06,2.89,1.07,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","AGGTAAGGCTTCAGCG",5,100.49,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L57A R136N E154F V173M P177L F185L",6
"lib1","SARS-CoV-2","AGGTAAGTCAGGTCTT",3,33.62,9.85,-0.91,0.08,2.45,1.02,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","AGGTAATAAGTTCAAG",6,70.57,10.87,0.11,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTAATAGTATCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13K L131* A145L N157K",4
"lib1","SARS-CoV-2","AGGTAATTGAATGTAT",1,59.37,10.8,0.04,0.08,2.84,1.09,0,">1 nonsynonymous","S43R D75K",2
"lib1","SARS-CoV-2","AGGTAATTTAATCCCA",5,0,NA,NA,NA,NA,NA,NA,"stop","A105D Y175*",2
"lib1","SARS-CoV-2","AGGTACAAACCCACGA",3,132.9,10.76,-0.01,0.05,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTACAAAGAAAAGG",7,74.75,9.18,-1.59,0.07,2.81,1.13,0,">1 nonsynonymous","C61L Y119P",2
"lib1","SARS-CoV-2","AGGTACACCAAGACCA",8,254.99,9.48,-1.28,0.06,2.69,1.08,0,">1 nonsynonymous","K114M Y121S",2
"lib1","SARS-CoV-2","AGGTACACCACAAATT",6,87.66,9.59,-1.17,0.11,2.13,1.06,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","AGGTACACTTACATGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38K T46S R73N C102D K132S G172L",6
"lib1","SARS-CoV-2","AGGTACATACAGAAAA",1,19.67,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A18I V37F W106G",3
"lib1","SARS-CoV-2","AGGTACATATCAACAC",6,21.09,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D97K C102R V115M",3
"lib1","SARS-CoV-2","AGGTACATCAATTGTG",1,51,9.33,-1.44,0.08,2.9,1.06,0,">1 nonsynonymous","G9V S43F L125N",3
"lib1","SARS-CoV-2","AGGTACATGAAAATAC",2,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19C A81R",2
"lib1","SARS-CoV-2","AGGTACATTGGGATTG",4,61.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T L38P F62E",3
"lib1","SARS-CoV-2","AGGTACATTTCTGGCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V T140H",2
"lib1","SARS-CoV-2","AGGTACCACCTTAATT",6,118.52,9.31,-1.45,0.07,2.72,1.1,0,">1 nonsynonymous","D98Y A145R",2
"lib1","SARS-CoV-2","AGGTACCACTGAGTTA",1,12.7,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N107T L183K",2
"lib1","SARS-CoV-2","AGGTACCCACAGACGG",2,16.01,10.7,-0.07,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTACCTACTGAAAT",1,35.91,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","C102A N110W R127F R136S Y143K V173M",6
"lib1","SARS-CoV-2","AGGTACCTCATGGCTG",10,146.07,10.74,-0.02,0.04,2.93,1.03,0,">1 nonsynonymous","I2E A42G",2
"lib1","SARS-CoV-2","AGGTACCTGAATAAGA",3,75.06,10.13,-0.63,0.09,2.51,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","AGGTACGACGAACGAG",4,68.75,10.86,0.09,0.07,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGTACGCAAGCAATT",2,10.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y93C A145T",2
"lib1","SARS-CoV-2","AGGTACGCGACCGGTC",2,0.11,NA,NA,NA,NA,NA,NA,"stop","Y91* W106A",2
"lib1","SARS-CoV-2","AGGTACGGATTCCTTA",6,17.45,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","F8V T55P F99D V103N",4
"lib1","SARS-CoV-2","AGGTACGTACACTACG",5,43.06,7.06,-3.7,0.53,1.5,1.3,0.05,">1 nonsynonymous","P82D A89T F99I E154G",4
"lib1","SARS-CoV-2","AGGTACGTATAAATCC",4,112.18,10.43,-0.33,0.04,2.82,1.05,0,"1 nonsynonymous","N24I",1
"lib1","SARS-CoV-2","AGGTACGTATATTAAG",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R I80E Y91A V103T",4
"lib1","SARS-CoV-2","AGGTACTACAAAAAAC",5,71.13,9.8,-0.96,0.1,2.23,1.08,0,">1 nonsynonymous","A89C G116W",2
"lib1","SARS-CoV-2","AGGTACTGTACTTGAC",2,30.47,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41C C61G G101A G155C",4
"lib1","SARS-CoV-2","AGGTAGAAACACATAA",12,267,8.96,-1.81,0.06,2.76,1.1,0,">1 nonsynonymous","N24S D90T Y119M",3
"lib1","SARS-CoV-2","AGGTAGAAACATTTAG",3,8.99,8.96,-1.8,0.34,1.59,1.16,0.04,">1 nonsynonymous","T3V G9A L122S S139I E141R A190V",6
"lib1","SARS-CoV-2","AGGTAGAATGCGAAAC",1,28.81,9.35,-1.41,0.12,2.69,1.06,0.01,">1 nonsynonymous","F44N F160L",2
"lib1","SARS-CoV-2","AGGTAGAGAAAACAAG",14,114.91,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","T15A N40P S113R T201R",4
"lib1","SARS-CoV-2","AGGTAGAGGCCCTCAT",10,1.87,NA,NA,NA,NA,NA,NA,"stop","N13K K56S E76*",3
"lib1","SARS-CoV-2","AGGTAGATGGTAAAGA",2,31.86,10.63,-0.13,0.04,2.93,1.03,0,">1 nonsynonymous","S29T G116E",2
"lib1","SARS-CoV-2","AGGTAGATTGAGCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S N64F D112T A145D",4
"lib1","SARS-CoV-2","AGGTAGCGCCAAACGA",3,26.95,10.77,0,0.07,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTAGCGGAAAGTAG",2,54.11,9.36,-1.4,0.13,2.16,1.12,0.01,"1 nonsynonymous","Y165L",1
"lib1","SARS-CoV-2","AGGTAGCGGCAACTTC",6,46.78,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P54L I104L D137W",3
"lib1","SARS-CoV-2","AGGTAGCTTAATTCGA",6,1094.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19R K26N F47T T55D R127G",5
"lib1","SARS-CoV-2","AGGTAGGACAGAATAG",2,6.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L T15I F62S P82M",4
"lib1","SARS-CoV-2","AGGTAGGCAAACTATA",9,59.5,7.79,-2.97,0.12,1.53,1.14,0,">1 nonsynonymous","S45I N107Q F156V",3
"lib1","SARS-CoV-2","AGGTAGGTCCAATTAA",1,100.93,9.53,-1.24,0.05,2.86,1.07,0,"1 nonsynonymous","G117S",1
"lib1","SARS-CoV-2","AGGTAGGTCCTAATTA",6,106.43,10.73,-0.04,0.05,2.9,1.07,0,"1 nonsynonymous","H189Y",1
"lib1","SARS-CoV-2","AGGTAGGTGGCTGTGC",5,63.64,10.57,-0.19,0.06,2.87,1.07,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","AGGTAGTAATTATGAA",3,26.7,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N1I W23M N40L P54V R136Y",5
"lib1","SARS-CoV-2","AGGTAGTATAATTCAC",2,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y V103R",2
"lib1","SARS-CoV-2","AGGTAGTCCATTCAAA",4,37.07,6,-4.76,1.4,1.5,1.19,0.01,">1 nonsynonymous","L5C A42S S45P T55R G152C N157D",6
"lib1","SARS-CoV-2","AGGTAGTGGCGCTGTA",9,3.35,NA,NA,NA,NA,NA,NA,"stop","R27* I88S S113K T201P",4
"lib1","SARS-CoV-2","AGGTAGTTACATTGTC",7,139.26,10.65,-0.12,0.06,2.92,1.06,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","AGGTATAAAATAACAT",5,64.57,10.17,-0.59,0.04,2.86,1.01,0,">1 nonsynonymous","N64S G155L",2
"lib1","SARS-CoV-2","AGGTATAAATTGGAGT",2,5.45,9.43,-1.33,0.17,2.39,1,0.01,">1 nonsynonymous","S129G Y143T",2
"lib1","SARS-CoV-2","AGGTATACACTCGTAA",2,9.64,6,-4.76,2,3,1.05,0,">1 nonsynonymous","Y91C Y121T P191S",3
"lib1","SARS-CoV-2","AGGTATACAGGGCTAC",1,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M N118A T170M",3
"lib1","SARS-CoV-2","AGGTATAGAAATTGCA",5,69.69,6.09,-4.67,0.7,1.5,1.2,0.01,">1 nonsynonymous","N1E A14L T63V K87N F167G",5
"lib1","SARS-CoV-2","AGGTATATACAAGATG",3,77.39,10.5,-0.27,0.07,2.88,1.06,0,">1 nonsynonymous","T55N N120F Q163T S200E",4
"lib1","SARS-CoV-2","AGGTATATACCACAGA",2,68.8,9.59,-1.18,0.11,2.01,1.11,0,">1 nonsynonymous","G9T N107C F126L",3
"lib1","SARS-CoV-2","AGGTATATATGCCCTA",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I V52T",2
"lib1","SARS-CoV-2","AGGTATCAAAAAGGCA",1,5.08,10.33,-0.43,0.07,2.94,1.04,0,">1 nonsynonymous","S36L G116I S200I",3
"lib1","SARS-CoV-2","AGGTATCATTTTGATG",15,810.41,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","N30Q F47L L95A",3
"lib1","SARS-CoV-2","AGGTATCCCCCATTGA",1,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R V103D P149S",3
"lib1","SARS-CoV-2","AGGTATCCTACCCAGT",4,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Y N107Y V182N",3
"lib1","SARS-CoV-2","AGGTATCCTTACACCA",1,2.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134V",1
"lib1","SARS-CoV-2","AGGTATCGACACGATA",1,18.47,10.8,0.04,0.11,2.94,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTATCGACGGACCT",9,143.24,10.64,-0.13,0.05,2.87,1.1,0,">1 nonsynonymous","P149G V173Q",2
"lib1","SARS-CoV-2","AGGTATCTAGTTACAA",5,59.35,10.3,-0.47,0.07,2.73,1.05,0,">1 nonsynonymous","R16G S36I",2
"lib1","SARS-CoV-2","AGGTATCTTATTTAAA",3,19.9,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","C49G L60F S184K",3
"lib1","SARS-CoV-2","AGGTATGAATACAAAA",2,28.56,9.74,-1.02,0.13,2.11,1.09,0.01,">1 nonsynonymous","I80L V153Y S164V",3
"lib1","SARS-CoV-2","AGGTATGGGAAATAAC",3,40.28,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14F K56W K94Q",3
"lib1","SARS-CoV-2","AGGTATGGGTGTTCCG",4,50.04,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","T55P A105M G117T C158Q",4
"lib1","SARS-CoV-2","AGGTATGTATACAAAT",2,20.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29L N118C S164M L183N",4
"lib1","SARS-CoV-2","AGGTATGTATTATTAT",4,20.91,7.89,-2.87,0.25,1.5,1.06,0.03,"1 nonsynonymous","V182K",1
"lib1","SARS-CoV-2","AGGTATGTCACAATGA",3,29.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H D137F",2
"lib1","SARS-CoV-2","AGGTATGTTTTGCGTT",3,87.72,10.25,-0.51,0.05,2.96,1,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","AGGTATTAACGACAAG",4,143.08,10.73,-0.04,0.05,2.88,1.05,0,">1 nonsynonymous","D90N T100I L187M",3
"lib1","SARS-CoV-2","AGGTATTGCAATGCAC",13,28.2,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Q84Y T100W A105P Y119P G146K",5
"lib1","SARS-CoV-2","AGGTATTGGCAAAATG",2,76.86,10.79,0.03,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTATTGGCCAATAA",3,69.79,8.56,-2.2,0.12,2.72,1.11,0.01,"1 nonsynonymous","S113R",1
"lib1","SARS-CoV-2","AGGTATTTCATTTACT",5,1.26,NA,NA,NA,NA,NA,NA,"stop","Y35R L57D T85*",3
"lib1","SARS-CoV-2","AGGTATTTGCGCGATG",10,13.68,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A14T L57Q C102V F167R",4
"lib1","SARS-CoV-2","AGGTCAAAGATTCTGG",2,13.09,7.67,-3.1,0.45,1.5,1.14,0.06,">1 nonsynonymous","L95C K128V N151S T201K",4
"lib1","SARS-CoV-2","AGGTCAACCAACCGGG",6,22.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86V L95C D112L F167R V182G",5
"lib1","SARS-CoV-2","AGGTCAACCCGCACAA",3,46.47,10.79,0.03,0.06,2.97,1,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","AGGTCAACGATCCTGG",6,1,NA,NA,NA,NA,NA,NA,"stop","N4L D59* S139P",3
"lib1","SARS-CoV-2","AGGTCAACGTGGTACT",1,5.8,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G51Y W106V S139N",3
"lib1","SARS-CoV-2","AGGTCAACTTTTCCCT",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y C102W S139V T148I",4
"lib1","SARS-CoV-2","AGGTCAAGCACCCTAA",2,9.9,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N64S T148P R179Q",3
"lib1","SARS-CoV-2","AGGTCAATAACGGAGC",2,7.98,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F8G A18G T55E F99D W106I N151F",6
"lib1","SARS-CoV-2","AGGTCAATACAATAAT",3,7.58,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A42I F62N D112G P149S",4
"lib1","SARS-CoV-2","AGGTCAATTAATTAAC",3,64.26,9.19,-1.58,0.11,2.71,1.17,0,">1 nonsynonymous","T55C Y119N",2
"lib1","SARS-CoV-2","AGGTCACAACCTCTAC",1,13.42,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N40I V180K",2
"lib1","SARS-CoV-2","AGGTCACAAGTAATAG",1,0.55,NA,NA,NA,NA,NA,NA,"stop","F44T N92* V103R",3
"lib1","SARS-CoV-2","AGGTCACCAGTAAATT",3,55.36,10.04,-0.72,0.13,2.19,1.07,0,">1 nonsynonymous","W106S V173R",2
"lib1","SARS-CoV-2","AGGTCAGAAGATCCGA",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q E141D P169Q",3
"lib1","SARS-CoV-2","AGGTCAGAGAAAAGTT",2,26.32,10.21,-0.56,0.07,2.42,1.04,0,">1 nonsynonymous","P7Y G51H V153L",3
"lib1","SARS-CoV-2","AGGTCAGCGCGGGAAC",5,95.34,10.26,-0.5,0.04,2.86,1.02,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","AGGTCAGCTTAATAGT",2,37.66,10.84,0.07,0.09,2.86,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","AGGTCAGTAACTAAAG",1,48.38,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D34A F167K",2
"lib1","SARS-CoV-2","AGGTCATAATCGCGTT",6,70.06,8.74,-2.02,0.1,2.89,1.1,0,">1 nonsynonymous","L122Q Q144I G166K",3
"lib1","SARS-CoV-2","AGGTCATTAGACGTTT",5,24.5,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A14L S36A K114I L122Y C150Y",5
"lib1","SARS-CoV-2","AGGTCATTCCATAAAC",3,32.8,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19P K56T T100L D112E Y143S",5
"lib1","SARS-CoV-2","AGGTCATTCTTATCAA",1,48.46,10.76,0,0.1,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTCCAAACCCCAAA",1,15.3,9.24,-1.52,0.14,2.71,1.28,0.01,">1 nonsynonymous","T85R P169V G174L",3
"lib1","SARS-CoV-2","AGGTCCAACCCTACTA",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P Q176W",2
"lib1","SARS-CoV-2","AGGTCCAACGTCCTTT",1,121.68,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86L Y119L K128D G166D K199S",5
"lib1","SARS-CoV-2","AGGTCCAAGACAATGA",1,64.64,7.53,-3.24,0.16,2.14,1.17,0.01,">1 nonsynonymous","N120Q C158N",2
"lib1","SARS-CoV-2","AGGTCCAATATCAAAC",9,66.97,6,-4.76,2,3,1.22,0,">1 nonsynonymous","Y91T C150N T201S",3
"lib1","SARS-CoV-2","AGGTCCAATTTACCGC",3,30.42,9.32,-1.45,0.14,1.74,1.17,0.01,">1 nonsynonymous","N30P V37D W106S E141L S184Y",5
"lib1","SARS-CoV-2","AGGTCCACATAACGGC",6,70.19,6,-4.76,1.7,1.5,1.2,0.01,">1 nonsynonymous","A67N T201V",2
"lib1","SARS-CoV-2","AGGTCCACTATGATCT",3,15.05,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F12N S129P G174V",3
"lib1","SARS-CoV-2","AGGTCCATCTAAAAGG",5,14.05,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D34P P96H I138L",3
"lib1","SARS-CoV-2","AGGTCCATGTAGGACC",2,8.22,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F44R V103G T140K",3
"lib1","SARS-CoV-2","AGGTCCCCATAATCCC",2,49.07,10.76,0,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTCCCTGCGTGTAT",2,39.54,9.81,-0.96,0.15,1.92,1.1,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","AGGTCCGAGGGCCTGA",5,27.52,6,-4.76,2,1.5,1.22,0.04,"1 nonsynonymous","F70S",1
"lib1","SARS-CoV-2","AGGTCCGGCAACCAAC",7,52.92,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N107R C158H",2
"lib1","SARS-CoV-2","AGGTCCGTCACAATAC",2,27.85,9.9,-0.87,0.15,2.03,1.01,0.02,">1 nonsynonymous","S129L R136A",2
"lib1","SARS-CoV-2","AGGTCCTAAATCAGTG",3,6.87,7.06,-3.7,0.41,1.5,1,0.06,">1 nonsynonymous","C61P N157F G166P",3
"lib1","SARS-CoV-2","AGGTCCTATACTGCAA",3,46.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K G86P Y175K",3
"lib1","SARS-CoV-2","AGGTCCTTGATAAACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V I28M T55S F62P K94D C102E R127T",7
"lib1","SARS-CoV-2","AGGTCGAACATATGTT",1,8.42,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S29R I88G W106T G155S",4
"lib1","SARS-CoV-2","AGGTCGAAGCAACTTG",2,27.49,10.37,-0.39,0.11,2.95,1,0.01,">1 nonsynonymous","K114M S184F",2
"lib1","SARS-CoV-2","AGGTCGAGGGATAGGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R W106L G116P",3
"lib1","SARS-CoV-2","AGGTCGCCATTCGCCT",2,11.69,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","P82V Y159S",2
"lib1","SARS-CoV-2","AGGTCGCCTCACGACT",1,11.35,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44T Y50L I138T",3
"lib1","SARS-CoV-2","AGGTCGCGACAATCCA",7,178.79,10.6,-0.16,0.03,2.94,1,0,">1 nonsynonymous","T55M S139H",2
"lib1","SARS-CoV-2","AGGTCGGAGCACTGGA",8,28.33,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S43P T55C F99V A105H S113N Q168L",6
"lib1","SARS-CoV-2","AGGTCGGCGGACACTA",7,0.51,NA,NA,NA,NA,NA,NA,"stop","A33R S43* L95P C158V",4
"lib1","SARS-CoV-2","AGGTCGGGGATATTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S36L F62* F99* Q168R K198D",5
"lib1","SARS-CoV-2","AGGTCTAAAAAAAATG",2,13.75,10.88,0.12,0.1,2.85,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGGTCTAAATAAGTAA",4,29.35,10.67,-0.1,0.09,2.92,1.01,0,">1 nonsynonymous","L5K N64I",2
"lib1","SARS-CoV-2","AGGTCTACACTCGTAT",6,108.72,10.61,-0.15,0.05,2.95,1.02,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","AGGTCTAGATAAAAGG",13,42.62,6.33,-4.43,0.79,1.5,1.21,0.04,">1 nonsynonymous","T15Y N64V V103L C150N",4
"lib1","SARS-CoV-2","AGGTCTAGATGGTACG",9,3.71,NA,NA,NA,NA,NA,NA,"stop","N4* S41P D59G L95V K114L",5
"lib1","SARS-CoV-2","AGGTCTATGGAAACGA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75L A81E G117R G174W G196V",5
"lib1","SARS-CoV-2","AGGTCTGGCAGAGTAT",4,33.39,8.45,-2.31,0.2,1.5,1,0.02,"1 nonsynonymous","A89W",1
"lib1","SARS-CoV-2","AGGTCTGGGACCCAGG",11,42.52,8.29,-2.47,0.14,1.82,1.15,0.01,"1 nonsynonymous","G166Q",1
"lib1","SARS-CoV-2","AGGTCTGTGATACTAG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F S147E",2
"lib1","SARS-CoV-2","AGGTCTTACAGCATGT",2,76.96,9.98,-0.78,0.05,2.86,1.05,0,">1 nonsynonymous","A14N S113G",2
"lib1","SARS-CoV-2","AGGTCTTATCCTCTAA",6,117.41,10.54,-0.22,0.05,2.92,1.02,0,"1 nonsynonymous","S41K",1
"lib1","SARS-CoV-2","AGGTCTTGATACAAAA",1,71.04,10.19,-0.57,0.05,2.85,1.06,0,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","AGGTGAAAAACACAAT",1,46.38,9.53,-1.23,0.08,2.79,1.12,0,"1 nonsynonymous","G74E",1
"lib1","SARS-CoV-2","AGGTGAAACATATTTA",2,19.63,9.9,-0.86,0.12,2.34,1.08,0.01,">1 nonsynonymous","A14L S41V",2
"lib1","SARS-CoV-2","AGGTGAAGGACGATTG",3,60.05,10.29,-0.47,0.06,2.97,1,0,">1 nonsynonymous","S129G F156M",2
"lib1","SARS-CoV-2","AGGTGAATACGTAGAC",14,171.96,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F12L N24Y K48A D59N D98G G152R S184K H189M",8
"lib1","SARS-CoV-2","AGGTGAATATAACACA",14,232.37,10.17,-0.59,0.07,2.54,1.04,0,"1 nonsynonymous","G51L",1
"lib1","SARS-CoV-2","AGGTGAATGAACTATT",10,29.5,6.24,-4.52,0.91,1.5,1.21,0.04,">1 nonsynonymous","R16Y A42L G51D C102Y Y119T",5
"lib1","SARS-CoV-2","AGGTGACACTTTTACT",7,73.37,9.66,-1.11,0.12,2.43,1.09,0.01,">1 nonsynonymous","L60T P161S",2
"lib1","SARS-CoV-2","AGGTGACGACTGAAAC",2,23.98,10.33,-0.43,0.06,2.77,1.01,0,">1 nonsynonymous","I2L N107S",2
"lib1","SARS-CoV-2","AGGTGAGATGCTATCG",16,203.02,10.45,-0.31,0.04,2.91,1.01,0,">1 nonsynonymous","F44L K114V",2
"lib1","SARS-CoV-2","AGGTGAGCTATAAACT",1,16.71,9.47,-1.3,0.17,1.71,1.04,0.02,">1 nonsynonymous","Y35F R127H F134R E141I P197K",5
"lib1","SARS-CoV-2","AGGTGAGTATGCAGAA",5,69.68,10.72,-0.04,0.08,2.96,1.02,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","AGGTGATAATACCTAG",1,4.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49T",1
"lib1","SARS-CoV-2","AGGTGATCAAATAAAA",1,6.79,6,-4.76,2,2.41,1.03,0,">1 nonsynonymous","S41L K56M G86P F99L",4
"lib1","SARS-CoV-2","AGGTGATCAAGCAGAC",2,3.7,NA,NA,NA,NA,NA,NA,"stop","I88L C102* G172R",3
"lib1","SARS-CoV-2","AGGTGATCGTGAGCAT",2,6.94,6.27,-4.5,1.22,3,1.11,0.01,">1 nonsynonymous","I2Y Q84E Y119E D137I T201G",5
"lib1","SARS-CoV-2","AGGTGATGTTGTAGCT",3,87.45,10.8,0.04,0.08,2.94,1.01,0,"1 nonsynonymous","S184H",1
"lib1","SARS-CoV-2","AGGTGATTAAGAGAAT",5,54.81,7.89,-2.88,0.19,1.5,1.18,0.01,">1 nonsynonymous","N1F T46V P133E T170M",4
"lib1","SARS-CoV-2","AGGTGCAATAGCGAAC",10,126.17,10.18,-0.59,0.04,2.71,1.05,0,">1 nonsynonymous","V37N F62D Y91F",3
"lib1","SARS-CoV-2","AGGTGCCCGATTGATC",8,147.86,10.76,0,0.07,2.93,1.04,0,"1 nonsynonymous","D75K",1
"lib1","SARS-CoV-2","AGGTGCCCTATCCAAT",2,23.22,10.71,-0.06,0.07,3,1,0,">1 nonsynonymous","V37S P149S",2
"lib1","SARS-CoV-2","AGGTGCCGATAGGCTG",4,98.14,9.43,-1.34,0.13,1.75,1.13,0.01,">1 nonsynonymous","V11N G116K",2
"lib1","SARS-CoV-2","AGGTGCGACGAACCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67D Q79R Y91S",3
"lib1","SARS-CoV-2","AGGTGCTACAACAAAG",14,510.12,9.15,-1.61,0.06,2.68,1.1,0,">1 nonsynonymous","Y121F Q176H",2
"lib1","SARS-CoV-2","AGGTGCTCCAAGAGAC",6,65.36,10.81,0.05,0.09,2.95,1.03,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","AGGTGCTGCACGAACT",4,82.3,9.43,-1.33,0.11,2.32,1.12,0,">1 nonsynonymous","P7C D97C N130P G146H",4
"lib1","SARS-CoV-2","AGGTGGAAAAAGTCAT",1,43.96,9.76,-1,0.11,2.54,1.03,0,">1 nonsynonymous","N1C T85M G152T",3
"lib1","SARS-CoV-2","AGGTGGAAAATTGCAA",4,64.55,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","S41R Q144L C158P",3
"lib1","SARS-CoV-2","AGGTGGACCACATTTG",5,129.1,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7H V37T N64L G83R V103M S139P G155E",7
"lib1","SARS-CoV-2","AGGTGGACCTCTCCAA",9,114.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35Q D90F L131C",3
"lib1","SARS-CoV-2","AGGTGGCATACCTAAC",1,11.03,7.9,-2.87,0.43,1.68,1.04,0.07,">1 nonsynonymous","S113R T140V P149Y G174F",4
"lib1","SARS-CoV-2","AGGTGGCATGCCATCA",1,44.21,8.94,-1.83,0.1,2.36,1.08,0,">1 nonsynonymous","N110S Y165V",2
"lib1","SARS-CoV-2","AGGTGGCCGCATAACG",2,14.36,10.67,-0.09,0.05,2.96,1,0,">1 nonsynonymous","N4T F12I L125M S200N",4
"lib1","SARS-CoV-2","AGGTGGCGGCTTTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* A42C G166F",3
"lib1","SARS-CoV-2","AGGTGGCGTAAAATAA",2,33.45,8.34,-2.42,0.22,1.96,1.06,0.02,">1 nonsynonymous","A33V D98F V115H K132L N157Q",5
"lib1","SARS-CoV-2","AGGTGGTAACCGCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D112R N120*",2
"lib1","SARS-CoV-2","AGGTGGTCTACACAAA",9,49.58,8.71,-2.06,0.14,1.82,1.12,0.01,">1 nonsynonymous","L5Q S19T E141Y",3
"lib1","SARS-CoV-2","AGGTGGTGAAGAATTT",1,49.72,10.13,-0.63,0.09,2.66,1.06,0,">1 nonsynonymous","I2D N40I",2
"lib1","SARS-CoV-2","AGGTGGTTATACGAAT",2,152.29,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T15D V37R F44T V77G Q176C P197S",6
"lib1","SARS-CoV-2","AGGTGTAAACTATTTA",3,53.72,8.39,-2.37,0.12,2.39,1.04,0.01,">1 nonsynonymous","T15A F167W",2
"lib1","SARS-CoV-2","AGGTGTAAAGATATTA",1,28.52,10.41,-0.36,0.13,2.68,1.11,0.01,">1 nonsynonymous","G9R K87M",2
"lib1","SARS-CoV-2","AGGTGTAACGGAGCGC",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y C49T A81R Y175M",4
"lib1","SARS-CoV-2","AGGTGTAAGACTTAGG",3,21.83,10.38,-0.38,0.15,2.25,1.05,0.01,">1 nonsynonymous","C6L P149H",2
"lib1","SARS-CoV-2","AGGTGTAAGATGTAAC",6,0.35,NA,NA,NA,NA,NA,NA,"stop","L5* P133T P191L",3
"lib1","SARS-CoV-2","AGGTGTACAAGGAAAA",1,43.99,10.12,-0.64,0.05,2.94,1.01,0,">1 nonsynonymous","D90E V173G T201W",3
"lib1","SARS-CoV-2","AGGTGTACGTAAACTA",3,42.11,10.23,-0.54,0.15,2.14,1,0.01,">1 nonsynonymous","I104S N110R",2
"lib1","SARS-CoV-2","AGGTGTCGCTAGCTGT",8,72.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22M Y93I V115I",3
"lib1","SARS-CoV-2","AGGTGTGAAAGAAAAG",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T I88M I104T S129L A190G",5
"lib1","SARS-CoV-2","AGGTGTGACACCTCTA",4,0,NA,NA,NA,NA,NA,NA,"stop","R16* W106R K128Y G155T",4
"lib1","SARS-CoV-2","AGGTGTGCCGAAAATA",3,77.79,8.89,-1.88,0.15,1.62,1.14,0.01,">1 nonsynonymous","F12G S41R",2
"lib1","SARS-CoV-2","AGGTGTGCTAATTGCT",2,17.2,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","I142H R179M",2
"lib1","SARS-CoV-2","AGGTGTGGTTCATCGA",3,21.98,9.71,-1.06,0.12,2.11,1.02,0.01,">1 nonsynonymous","C6I K56F",2
"lib1","SARS-CoV-2","AGGTGTTACATATTTA",7,311.68,10.83,0.06,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTGTTCATTTATCT",4,56.71,10.78,0.02,0.08,2.81,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTGTTCGATTGGCG",4,14.71,8.18,-2.59,0.4,1.5,1.06,0.07,">1 nonsynonymous","S113L Y123S Q168F",3
"lib1","SARS-CoV-2","AGGTGTTTATTGGCTT",5,5.43,NA,NA,NA,NA,NA,NA,"stop","L5K A42C T63* A81C D90R K132P T140*",7
"lib1","SARS-CoV-2","AGGTGTTTGCTCATGA",7,3.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","AGGTTAAAACATTGTA",7,1.88,NA,NA,NA,NA,NA,NA,"stop","I2L S45Y T63R S69L G83I Y91V Q176*",7
"lib1","SARS-CoV-2","AGGTTAAATAAGTTCA",2,34.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G51S N92M",2
"lib1","SARS-CoV-2","AGGTTAAATACCACAT",1,5.67,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","W23V Y35W T85L D98I R127N",5
"lib1","SARS-CoV-2","AGGTTAACCCGCAAGT",4,48.21,6.38,-4.38,0.93,1.5,1.2,0.05,">1 nonsynonymous","T3H V77Q L125F R136N G146L T201S",6
"lib1","SARS-CoV-2","AGGTTAACCTGGAACT",1,2.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182K",1
"lib1","SARS-CoV-2","AGGTTAAGTCGATATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W S108C",2
"lib1","SARS-CoV-2","AGGTTAATAGAACTGA",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31H Y119H",2
"lib1","SARS-CoV-2","AGGTTAATCAATTGAA",2,4.15,NA,NA,NA,NA,NA,NA,"stop","L5M Q84* Y175M",3
"lib1","SARS-CoV-2","AGGTTAATCACCAAGG",1,0.73,NA,NA,NA,NA,NA,NA,"stop","S43Y L122R L162* T201S",4
"lib1","SARS-CoV-2","AGGTTACACGACTTTG",6,79.65,10.49,-0.27,0.05,2.84,1.02,0,">1 nonsynonymous","G51N F62M D90M K198V",4
"lib1","SARS-CoV-2","AGGTTACAGAACCTGA",5,73.59,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9K A42T T63Q K114L Y119I E135I T148I",7
"lib1","SARS-CoV-2","AGGTTACCACGGACTG",9,125.58,10.48,-0.28,0.04,2.87,1.04,0,">1 nonsynonymous","A33F Y66R",2
"lib1","SARS-CoV-2","AGGTTACCCAATATCA",3,67.2,10.71,-0.05,0.06,2.95,1.04,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","AGGTTACCGCGAGTAG",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M L95Y P149E",3
"lib1","SARS-CoV-2","AGGTTACCGGCGAAGG",4,15.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A89H S184P",2
"lib1","SARS-CoV-2","AGGTTACGCGGTGTGT",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96I P149K P169Q",3
"lib1","SARS-CoV-2","AGGTTACTAAATGCGA",5,84.91,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V32T I88N Y121A I138R",4
"lib1","SARS-CoV-2","AGGTTAGAAAATTTCA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","W23K N130*",2
"lib1","SARS-CoV-2","AGGTTAGAAAGAATTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L K128V V173Y",3
"lib1","SARS-CoV-2","AGGTTAGAGAAGCCGT",5,86.27,10.1,-0.66,0.06,2.23,1.05,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","AGGTTAGGTGGCGAAG",2,12.5,9.97,-0.79,0.11,2.05,1.12,0.01,">1 nonsynonymous","N1K F12I G83A Y123H",4
"lib1","SARS-CoV-2","AGGTTAGTTCTTCAGC",8,31.36,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T3K N30K G86R Y91S P96Q",5
"lib1","SARS-CoV-2","AGGTTATAAACTGATA",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R F99Y S113N E154N",4
"lib1","SARS-CoV-2","AGGTTATAATAAGCCA",6,43.21,6,-4.76,1.13,1.5,1.14,0.02,">1 nonsynonymous","A14D P82R Y119D",3
"lib1","SARS-CoV-2","AGGTTATACACATGCG",1,6.62,10.49,-0.28,0.1,2.71,1.28,0.01,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","AGGTTATACCGGATAA",2,43.87,7.27,-3.5,0.33,1.5,1.14,0.04,">1 nonsynonymous","N30K G83R T100N W106Y",4
"lib1","SARS-CoV-2","AGGTTATGTTGACTCG",4,41.21,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S19L A105E S113L S200Y",4
"lib1","SARS-CoV-2","AGGTTATTATATAAAA",2,8.31,10.16,-0.6,0.15,2.85,1,0,">1 nonsynonymous","S29Y F156L",2
"lib1","SARS-CoV-2","AGGTTATTGTTCCAAA",6,94.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105M C158H Y175M",3
"lib1","SARS-CoV-2","AGGTTCAAATCATCGA",2,10.43,6,-4.76,0.94,3,1.04,0,">1 nonsynonymous","C6T S19I D59K C158Y S184R",5
"lib1","SARS-CoV-2","AGGTTCAACAAAACCT",10,56.13,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","F17G C49F V65T",3
"lib1","SARS-CoV-2","AGGTTCACATGAAGTC",7,5.78,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A33Y K56D A89R V103G P133A",5
"lib1","SARS-CoV-2","AGGTTCACCATATCAG",7,66.28,10.76,-0.01,0.06,2.91,1.05,0,">1 nonsynonymous","F8L V37P",2
"lib1","SARS-CoV-2","AGGTTCACGGGGGAAG",5,34.39,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86M L162E",2
"lib1","SARS-CoV-2","AGGTTCCCGACCAAAG",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28Q Y50T N64I Y143I Q168R T201V",6
"lib1","SARS-CoV-2","AGGTTCCGCAAGGGAC",5,52.32,6.96,-3.81,0.34,1.5,1.06,0.02,">1 nonsynonymous","K87N D112L Q168K",3
"lib1","SARS-CoV-2","AGGTTCGACCGAGATA",2,8.94,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","I104R Y119E L131Y D137Y S147T",5
"lib1","SARS-CoV-2","AGGTTCTAACACAAAG",2,0.14,NA,NA,NA,NA,NA,NA,"stop","I72F E141T F156*",3
"lib1","SARS-CoV-2","AGGTTCTACAACACCT",19,185.39,6,-4.76,1.43,1.5,1.15,0,">1 nonsynonymous","V37W I72N N110V I138S S147Y",5
"lib1","SARS-CoV-2","AGGTTCTATTCCAGCG",7,134.14,10.78,0.02,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGGTTCTCCAACACAA",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R R78N S108Q T140R S200F",5
"lib1","SARS-CoV-2","AGGTTCTCGAAGCAGA",2,33.71,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y35R F44S P54C G117V S139M",5
"lib1","SARS-CoV-2","AGGTTCTTACCATAAG",3,7.44,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","S41F F70H N92V",3
"lib1","SARS-CoV-2","AGGTTCTTAGCCCCAC",3,25.73,6,-4.76,0.99,2.74,1.15,0.01,">1 nonsynonymous","Y35N D68F G101L N151L P197S",5
"lib1","SARS-CoV-2","AGGTTGAAAATGAAGG",7,191.74,10.23,-0.53,0.05,2.87,1,0,">1 nonsynonymous","N30K V37M L60S",3
"lib1","SARS-CoV-2","AGGTTGAATACCGAGC",8,96.91,7.91,-2.85,0.15,1.5,1.11,0.01,">1 nonsynonymous","G86A Q144T S200L",3
"lib1","SARS-CoV-2","AGGTTGACGAACAGAG",2,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86W D137L",2
"lib1","SARS-CoV-2","AGGTTGAGGGTCGGAA",1,28.93,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","E10S V182L",2
"lib1","SARS-CoV-2","AGGTTGATACTTCAGT",2,72.74,9.77,-0.99,0.07,2.5,1.01,0,"1 nonsynonymous","R124K",1
"lib1","SARS-CoV-2","AGGTTGATCAAACAAT",1,7.56,9.7,-1.07,0.25,1.82,1,0.02,">1 nonsynonymous","Y35I P82M",2
"lib1","SARS-CoV-2","AGGTTGATCCAATCAC",1,9.46,10.9,0.14,0.16,2.86,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGGTTGCAGATATTGA",2,8.71,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","G9T Y91W G146V",3
"lib1","SARS-CoV-2","AGGTTGCGGGGCATCA",8,48.26,7.88,-2.88,0.1,1.52,1.16,0,">1 nonsynonymous","F12I N107R E141V E186H",4
"lib1","SARS-CoV-2","AGGTTGCGTTAAACGA",6,41.88,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","E76F F99I N157I",3
"lib1","SARS-CoV-2","AGGTTGCTCAGAATTA",4,47.7,8.87,-1.9,0.17,1.5,1.17,0.01,">1 nonsynonymous","N1I L38P Y66F",3
"lib1","SARS-CoV-2","AGGTTGGCAAGTAACA",3,71.6,10.05,-0.72,0.1,2.48,1.04,0,">1 nonsynonymous","G9Q R127S I142V",3
"lib1","SARS-CoV-2","AGGTTGGCTCGCAGGT",5,27.95,9.57,-1.2,0.13,1.92,1.07,0.01,">1 nonsynonymous","S36W N64M D90G",3
"lib1","SARS-CoV-2","AGGTTGGGCAAGAAGA",2,38.52,6.71,-4.05,0.53,1.5,1.11,0.05,">1 nonsynonymous","C6R I72T G155H Y175P",4
"lib1","SARS-CoV-2","AGGTTGGTTACCCGGT",2,46.17,10.05,-0.71,0.09,2.09,1,0,">1 nonsynonymous","F8L T100G K114W",3
"lib1","SARS-CoV-2","AGGTTGGTTCTCACCC",10,131.91,6,-4.76,1.08,1.5,1.15,0.01,">1 nonsynonymous","I138G E154C G166M P177S",4
"lib1","SARS-CoV-2","AGGTTGTATAGTAACG",1,27.25,9.73,-1.03,0.08,2.94,1.01,0,">1 nonsynonymous","L5F K94R N130H F156N",4
"lib1","SARS-CoV-2","AGGTTGTCACTATACG",3,15.66,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6W S41L G86R",3
"lib1","SARS-CoV-2","AGGTTGTGAGCTATGT",4,107.56,8.38,-2.38,0.13,2.55,1.11,0.01,">1 nonsynonymous","D90R N118C I138T G166V T201Y",5
"lib1","SARS-CoV-2","AGGTTGTTAGAAACAC",1,57.65,10.33,-0.43,0.05,2.89,1.02,0,">1 nonsynonymous","N4W E141Q",2
"lib1","SARS-CoV-2","AGGTTTAACAGCTGCA",7,340.95,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","L5F G83F D112Y R136L I142L",5
"lib1","SARS-CoV-2","AGGTTTAATAGGTTCC",1,24.22,7.29,-3.47,0.38,1.5,1,0.04,">1 nonsynonymous","D68L V77K T201V",3
"lib1","SARS-CoV-2","AGGTTTAGGTTTCAAT",11,329.78,9.95,-0.81,0.07,2.3,1.05,0,">1 nonsynonymous","K56W A105T",2
"lib1","SARS-CoV-2","AGGTTTATATCCCTGC",4,22.18,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T55I D68K S139N",3
"lib1","SARS-CoV-2","AGGTTTATTAGAAAGC",12,195.66,10.16,-0.6,0.06,2.66,1.01,0,">1 nonsynonymous","G83S D97N I138L E186H",4
"lib1","SARS-CoV-2","AGGTTTCAAACCCTCA",2,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A G83S G152W",3
"lib1","SARS-CoV-2","AGGTTTCATAGACACA",5,25.35,6.54,-4.22,0.45,1.5,1.1,0.03,">1 nonsynonymous","S45F K56E P82F K87L E135S",5
"lib1","SARS-CoV-2","AGGTTTCCGTTGTAAA",5,41.73,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K56V F99L I104E G146K S184P",5
"lib1","SARS-CoV-2","AGGTTTCGACATACAG",4,25.99,6.22,-4.55,0.84,1.5,1.06,0.04,">1 nonsynonymous","T3V F12D S113L",3
"lib1","SARS-CoV-2","AGGTTTCGTATTAGGA",4,100.52,6,-4.76,1.54,1.5,1.14,0.01,">1 nonsynonymous","F12T Y165T",2
"lib1","SARS-CoV-2","AGGTTTCTGAATCTCA",6,124.97,10.35,-0.42,0.03,2.82,1.08,0,">1 nonsynonymous","L5E A89V",2
"lib1","SARS-CoV-2","AGGTTTGACTAAACTA",2,7.24,6,-4.76,2,3,1.01,0,">1 nonsynonymous","P7L A89E Q168R",3
"lib1","SARS-CoV-2","AGGTTTTAGGCCAACA",2,6.98,9.04,-1.73,0.29,1.62,1.06,0.04,">1 nonsynonymous","C6V F12I F17A",3
"lib1","SARS-CoV-2","AGGTTTTCAATAAAAG",1,13.78,6.64,-4.13,0.87,3,1.15,0.01,">1 nonsynonymous","A33R T63G I80V P96S",4
"lib1","SARS-CoV-2","AGGTTTTCTCTTCACA",2,7.62,10.79,0.02,0.03,2.99,1,0,">1 nonsynonymous","K48N P197D",2
"lib1","SARS-CoV-2","AGGTTTTTCGTGATAA",2,54.54,8.78,-1.98,0.09,2.85,1.08,0,">1 nonsynonymous","A105S Y119D Y178V",3
"lib1","SARS-CoV-2","AGTAAAAAAAGCCCCG",4,5.44,NA,NA,NA,NA,NA,NA,"stop","I2L F62C D90*",3
"lib1","SARS-CoV-2","AGTAAAAAAATGAAAC",4,46.88,8.95,-1.81,0.08,2.77,1.16,0,">1 nonsynonymous","N40H G117Y",2
"lib1","SARS-CoV-2","AGTAAAAAACAAATTC",1,5.97,9.94,-0.83,0.2,2.63,1.18,0.01,"1 nonsynonymous","E135R",1
"lib1","SARS-CoV-2","AGTAAAAAAGAAGGAG",1,45.01,9.12,-1.65,0.1,1.81,1.09,0,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","AGTAAAAAAGAAGGAT",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162K",1
"lib1","SARS-CoV-2","AGTAAAAAAGAGTTAT",1,31.63,10.75,-0.01,0.08,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAAAAATCAATCG",6,112.96,10.85,0.09,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAAAACTAGAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","L38* S53V N118R E141S G166L",5
"lib1","SARS-CoV-2","AGTAAAAAGAATATAT",4,1.53,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib1","SARS-CoV-2","AGTAAAAAGGGCAGAG",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F G155C",2
"lib1","SARS-CoV-2","AGTAAAAATACCCGTT",3,1.87,NA,NA,NA,NA,NA,NA,"stop","F99I W106* T140Y V180A",4
"lib1","SARS-CoV-2","AGTAAAAATAGAAGGG",14,189.36,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A89S G172V",2
"lib1","SARS-CoV-2","AGTAAAAATCTAATGC",2,0,NA,NA,NA,NA,NA,NA,"stop","V37S T46F V103W S147*",4
"lib1","SARS-CoV-2","AGTAAAAATGTTCATA",4,11.15,6.71,-4.05,0.64,1.5,1,0.07,">1 nonsynonymous","S41T C49P T55S V77W A81E V103K G196E",7
"lib1","SARS-CoV-2","AGTAAAACAACACCCA",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F D112A Y119R",3
"lib1","SARS-CoV-2","AGTAAAACATGATTTA",2,18.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22H G155E V180Y",3
"lib1","SARS-CoV-2","AGTAAAACCAAAGTAG",2,15,7.17,-3.59,0.56,1.51,1.26,0.06,">1 nonsynonymous","L5T G86R N130A",3
"lib1","SARS-CoV-2","AGTAAAACTACCTCAG",5,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G F12H S41I C150S F156W",5
"lib1","SARS-CoV-2","AGTAAAAGAAAGTGAC",3,47.32,6.99,-3.77,0.26,1.5,1.09,0.02,">1 nonsynonymous","G9T G83N A89T P96A A145Q",5
"lib1","SARS-CoV-2","AGTAAAAGAACCGAGA",7,0.33,NA,NA,NA,NA,NA,NA,"stop","D90N K114M G166* V173W",4
"lib1","SARS-CoV-2","AGTAAAAGAAGATTAA",1,10.62,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N1F R25T T46F A81I A145V",5
"lib1","SARS-CoV-2","AGTAAAAGAATGGCTA",4,81.76,9.86,-0.91,0.06,2.01,1.07,0,">1 nonsynonymous","Y35S D97F G152S",3
"lib1","SARS-CoV-2","AGTAAAAGCATACAGC",6,1.62,NA,NA,NA,NA,NA,NA,"stop","C6T L95Q N151K Y178*",4
"lib1","SARS-CoV-2","AGTAAAAGCGATATCA",1,13.95,6,-4.76,2,2.59,1.07,0.02,">1 nonsynonymous","V20R S29P N58L G83L I88S K128S P149N",7
"lib1","SARS-CoV-2","AGTAAAAGCGCCATAA",3,16.89,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L5T F44M F70L S200D",4
"lib1","SARS-CoV-2","AGTAAAAGCTTAAGGC",1,16.96,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6I R16F I88W N110R C150K",5
"lib1","SARS-CoV-2","AGTAAAAGGAAAAGCT",1,35.28,10.59,-0.17,0.07,2.97,1.03,0,">1 nonsynonymous","L5S Y35L Y123H",3
"lib1","SARS-CoV-2","AGTAAAAGGCATACTT",2,8.27,8.16,-2.6,0.27,1.88,1.11,0.03,">1 nonsynonymous","A81Y T100L V173W",3
"lib1","SARS-CoV-2","AGTAAAATAAGCCCGA",1,16.41,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G9E Y35S D59E L125K T148D F167C",6
"lib1","SARS-CoV-2","AGTAAAATAATACAAA",2,31.02,9.8,-0.96,0.06,2.83,1.05,0,">1 nonsynonymous","S43F G146T",2
"lib1","SARS-CoV-2","AGTAAAATACAGATAC",8,115.5,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5S R25P V37C E141R F167R",5
"lib1","SARS-CoV-2","AGTAAAATAGCATGTT",2,8,7.2,-3.57,0.58,1.5,1,0.06,">1 nonsynonymous","A14V G86L Y93L Y175M",4
"lib1","SARS-CoV-2","AGTAAAATATATTAAG",4,38.31,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7L T55F D68W K128C",4
"lib1","SARS-CoV-2","AGTAAAATCTGATACT",4,55.61,10.78,0.02,0.06,2.92,1.04,0,">1 nonsynonymous","I2D S43K",2
"lib1","SARS-CoV-2","AGTAAAATGCAGGTTG",4,29.99,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K56L G86R N110I R127Y E135R",5
"lib1","SARS-CoV-2","AGTAAAATGGTCTTCA",5,65.26,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V11N D90S A105I",3
"lib1","SARS-CoV-2","AGTAAAATGTTATGTA",1,11.79,NA,NA,NA,NA,NA,NA,"stop","N1* Y35H P82M A89D N107Y L162G",6
"lib1","SARS-CoV-2","AGTAAAATTGACTTCA",2,49.02,10.72,-0.04,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAAATTGTTGATT",13,43.92,6,-4.76,2,2.29,1.12,0,">1 nonsynonymous","S69E R78V F99I S147I G166K",5
"lib1","SARS-CoV-2","AGTAAACAACCGCTCA",7,41.5,7.37,-3.39,0.23,1.5,1.12,0.02,">1 nonsynonymous","Y66Q D98L F126T",3
"lib1","SARS-CoV-2","AGTAAACAAGACGTAG",1,31.68,6,-4.76,2,3,1.1,0,">1 nonsynonymous","W23K F47L F99W",3
"lib1","SARS-CoV-2","AGTAAACAATGTCCAC",4,98.3,10.44,-0.33,0.03,2.92,1.02,0,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","AGTAAACATAACAACT",3,104.86,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N1I P54R N92M",3
"lib1","SARS-CoV-2","AGTAAACATTGACATA",2,39.35,9.61,-1.16,0.13,2.23,1.11,0.01,">1 nonsynonymous","E10T N110R T148C F160L",4
"lib1","SARS-CoV-2","AGTAAACCTACGTAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F17M R25* C61G Y93T N107T I138F G172W",7
"lib1","SARS-CoV-2","AGTAAACCTTATCTCG",3,23.13,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F12S R25C D90S G101I",4
"lib1","SARS-CoV-2","AGTAAACCTTGAAAGG",3,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T Y50R",2
"lib1","SARS-CoV-2","AGTAAACGAAATCGTA",1,34.31,10.31,-0.45,0.07,2.75,1,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","AGTAAACGGTTGCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","AGTAAACGTAAAAACT",3,17.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6L F99K E141V R179T",4
"lib1","SARS-CoV-2","AGTAAACTAACAATGA",3,2.51,NA,NA,NA,NA,NA,NA,"stop","R16* T63* P82L",3
"lib1","SARS-CoV-2","AGTAAACTAACATTAT",11,121.49,10.78,0.01,0.06,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAACTTAGGGAAT",14,35.75,NA,NA,NA,NA,NA,NA,"stop","R27S A89Q D98* S164V",4
"lib1","SARS-CoV-2","AGTAAACTTTGCCTAG",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R D137A",2
"lib1","SARS-CoV-2","AGTAAAGAAAAAAGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3S F44I P149I P161R G172*",5
"lib1","SARS-CoV-2","AGTAAAGAAAGAGTGT",1,16.11,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L95K F126G N157H",3
"lib1","SARS-CoV-2","AGTAAAGAAGATAGAA",4,30.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T W106R L183W",3
"lib1","SARS-CoV-2","AGTAAAGACTGATACA",2,28.62,6.04,-4.72,0.47,1.68,1.11,0,">1 nonsynonymous","F17V S29E I72Y",3
"lib1","SARS-CoV-2","AGTAAAGAGTATTTAA",3,11.47,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","E135S V180N",2
"lib1","SARS-CoV-2","AGTAAAGATAATAATA",4,1.18,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","AGTAAAGATTTGACCT",3,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V K56M T100L",3
"lib1","SARS-CoV-2","AGTAAAGCCATTAATG",3,16.75,6,-4.76,1.81,3,1.29,0.01,">1 nonsynonymous","D75N D90S S129C D137Y",4
"lib1","SARS-CoV-2","AGTAAAGCCGTACGCC",3,79.18,10.34,-0.42,0.06,2.83,1,0,">1 nonsynonymous","K56L D90L",2
"lib1","SARS-CoV-2","AGTAAAGCGCCCAAGG",2,57.42,10.68,-0.09,0.1,2.78,1.06,0,"1 nonsynonymous","N110Q",1
"lib1","SARS-CoV-2","AGTAAAGCTATAATTG",2,14.08,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T3R P161L",2
"lib1","SARS-CoV-2","AGTAAAGGGACAGACA",2,40.5,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K94V N157R",2
"lib1","SARS-CoV-2","AGTAAAGGGCTCAGTG",1,6.83,7.25,-3.51,0.32,1.56,1.32,0.03,">1 nonsynonymous","L122S D137G Q144N H189S",4
"lib1","SARS-CoV-2","AGTAAAGGTCAAAGTT",6,69.86,9.88,-0.88,0.11,2.33,1.09,0,">1 nonsynonymous","G9Q S41L G51T Q168S",4
"lib1","SARS-CoV-2","AGTAAAGTAAACATAA",5,118.34,8.7,-2.07,0.08,2.39,1.1,0,">1 nonsynonymous","S36W Y66L G117N",3
"lib1","SARS-CoV-2","AGTAAAGTAGACTTAA",2,6.41,7.72,-3.04,0.41,1.5,1.02,0.05,">1 nonsynonymous","A42C Y50A Y178H",3
"lib1","SARS-CoV-2","AGTAAAGTGTTTGTTC",2,9.21,10.79,0.03,0.31,2.35,1.13,0.03,"1 nonsynonymous","A22M",1
"lib1","SARS-CoV-2","AGTAAATAAAACAGGG",7,20.14,6.45,-4.31,0.37,1.5,1.08,0.01,">1 nonsynonymous","S19R C31N",2
"lib1","SARS-CoV-2","AGTAAATAAGAAAGAT",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K N58M A105P R136T",4
"lib1","SARS-CoV-2","AGTAAATACACCCCAT",2,26.1,8.55,-2.22,0.2,1.54,1.18,0.01,"1 nonsynonymous","L183T",1
"lib1","SARS-CoV-2","AGTAAATACACGCTAT",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T P197L",2
"lib1","SARS-CoV-2","AGTAAATACGGTCTAA",2,15.46,9.76,-1.01,0.14,2.46,1.14,0.01,">1 nonsynonymous","C31Q Y39K",2
"lib1","SARS-CoV-2","AGTAAATATCGTCCCT",3,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T K48L C102A",3
"lib1","SARS-CoV-2","AGTAAATATGGTTACC",2,12.01,6.02,-4.75,2,1.5,1.16,0.06,">1 nonsynonymous","I2S P7Q Y93R I138Y P161H",5
"lib1","SARS-CoV-2","AGTAAATCAAGACTTG",5,73.24,10.27,-0.49,0.04,2.84,1.07,0,">1 nonsynonymous","G9T N109I",2
"lib1","SARS-CoV-2","AGTAAATCATAAAGGC",4,92.25,9.57,-1.2,0.04,2.89,1.07,0,"1 nonsynonymous","G117T",1
"lib1","SARS-CoV-2","AGTAAATCTGCATAAC",7,78.5,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T3V S108I P133R G174M",4
"lib1","SARS-CoV-2","AGTAAATGAATCCATA",1,39.01,10.72,-0.04,0.18,2.66,1.28,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAATGCATCCCCG",1,10.37,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V65T S113Q Y119S P149H L162D",5
"lib1","SARS-CoV-2","AGTAAATGCATTACAA",1,52.23,10.13,-0.64,0.06,2.95,1,0,">1 nonsynonymous","A105S A145I",2
"lib1","SARS-CoV-2","AGTAAATGCTTGTGGA",3,23.18,10.73,-0.04,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAATGGTATCACA",3,11.1,6.12,-4.64,0.5,3,1.07,0.01,">1 nonsynonymous","A22L D112R V173T V181K",4
"lib1","SARS-CoV-2","AGTAAATTTATAATAA",6,54.78,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","C61A G166V G172V",3
"lib1","SARS-CoV-2","AGTAAATTTTAATCGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P G83L A89R N107A F160R K198Q",6
"lib1","SARS-CoV-2","AGTAACAAATGAAGCC",7,93.81,9.92,-0.84,0.1,2.47,1.06,0,">1 nonsynonymous","A42L N107S N171H",3
"lib1","SARS-CoV-2","AGTAACAACATGTACG",7,77.65,7.28,-3.48,0.29,1.5,1.22,0.02,">1 nonsynonymous","T148C P161V",2
"lib1","SARS-CoV-2","AGTAACAACTCCTTTC",4,12.77,10.31,-0.46,0.06,2.88,1,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","AGTAACAATGGCCAAA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E I142L",2
"lib1","SARS-CoV-2","AGTAACACATATTTAA",6,90.65,8.31,-2.45,0.1,2.44,1.08,0,">1 nonsynonymous","C6V N40Y Y119N S184V",4
"lib1","SARS-CoV-2","AGTAACAGTAAAAACG",3,49.64,10.55,-0.21,0.05,2.92,1.02,0,">1 nonsynonymous","K132Q I142F",2
"lib1","SARS-CoV-2","AGTAACAGTGCATATC",4,102.53,9.24,-1.52,0.1,2.8,1.1,0,">1 nonsynonymous","C61Y D98K L122Q F156E",4
"lib1","SARS-CoV-2","AGTAACATAAATCCTC",4,12.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A105R P149W V181E",3
"lib1","SARS-CoV-2","AGTAACATACAGTGAA",1,52.79,8.39,-2.38,0.2,2.01,1.16,0.01,">1 nonsynonymous","Y35T N157K A190E",3
"lib1","SARS-CoV-2","AGTAACATAGTTATTA",3,40.17,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S19I F62S Y121C",3
"lib1","SARS-CoV-2","AGTAACATGTCTAGTG",5,120.5,6,-4.76,0.72,1.5,1.15,0.01,">1 nonsynonymous","Y143H V153G F167L",3
"lib1","SARS-CoV-2","AGTAACATTACTACAG",2,14.17,10.93,0.17,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAACCAACAGATGT",7,69.11,10.24,-0.52,0.06,2.87,1,0,">1 nonsynonymous","Y178L A192T",2
"lib1","SARS-CoV-2","AGTAACCACACAAGCG",4,99.39,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68L S129T I142R",3
"lib1","SARS-CoV-2","AGTAACCACGACGTAG",14,103.33,9.39,-1.37,0.11,2.27,1.13,0,">1 nonsynonymous","L122F S139E G155V",3
"lib1","SARS-CoV-2","AGTAACCACGGTTGAA",3,16.03,9.19,-1.57,0.16,2.77,1.06,0.01,">1 nonsynonymous","Q144C A190L",2
"lib1","SARS-CoV-2","AGTAACCAGCTTGTTA",3,25.58,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58S N64F L131D R179W G196W",5
"lib1","SARS-CoV-2","AGTAACCATCATCCGA",6,60.83,8.17,-2.59,0.28,1.5,1.08,0.03,">1 nonsynonymous","I2P G9C N118V I138A",4
"lib1","SARS-CoV-2","AGTAACCGACCAATAA",4,22.42,9.25,-1.52,0.09,2.82,1.2,0,">1 nonsynonymous","A42E D98K Y119D",3
"lib1","SARS-CoV-2","AGTAACCGCACCAACC",10,27.58,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49R Q84I P149Y",3
"lib1","SARS-CoV-2","AGTAACCGTACACGTA",4,2.16,NA,NA,NA,NA,NA,NA,"stop","W23V K56D L122Q Q144*",4
"lib1","SARS-CoV-2","AGTAACCTCAAAGGAC",3,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Y F160W L183P",3
"lib1","SARS-CoV-2","AGTAACCTCATTCCGA",2,41.5,6,-4.76,2,1.56,1.18,0.01,">1 nonsynonymous","C31T N58T G117P T170I",4
"lib1","SARS-CoV-2","AGTAACCTTCCTTCCC",7,24.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V P133A C150R",3
"lib1","SARS-CoV-2","AGTAACCTTGCCGCAC",2,94.96,10.78,0.01,0.05,2.96,1.04,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","AGTAACGAACCCCCAT",8,154.64,10.26,-0.5,0.04,2.86,1.01,0,">1 nonsynonymous","G9N A105C",2
"lib1","SARS-CoV-2","AGTAACGCGCTACCTA",6,23.38,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y21L Y50S R136V",3
"lib1","SARS-CoV-2","AGTAACGCTAAGTACT",4,15.81,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S139W V181C T201Y",3
"lib1","SARS-CoV-2","AGTAACGCTGTTTAGG",6,1.38,NA,NA,NA,NA,NA,NA,"stop","Y39* P96E I142T",3
"lib1","SARS-CoV-2","AGTAACGGTTCAAAAT",9,0.63,NA,NA,NA,NA,NA,NA,"stop","K26L S43L G101* D112V N118A F156Q T201A",7
"lib1","SARS-CoV-2","AGTAACGTCCCTCTTA",4,106.06,8.3,-2.47,0.3,1.5,1,0.04,">1 nonsynonymous","I2D A14I V173T",3
"lib1","SARS-CoV-2","AGTAACTAGCGCATAT",10,118.08,10.66,-0.11,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAACTCAACACAAG",7,103.76,9.93,-0.83,0.07,2.87,1.04,0,">1 nonsynonymous","G152T G174L",2
"lib1","SARS-CoV-2","AGTAACTCACATAACT",10,158.63,8.44,-2.32,0.12,2.66,1.1,0.01,">1 nonsynonymous","N4S N120I F126S G174S L188T T201I",6
"lib1","SARS-CoV-2","AGTAACTCAGATTGAT",6,202.04,8.72,-2.04,0.08,2.81,1.04,0,"1 nonsynonymous","Y143A",1
"lib1","SARS-CoV-2","AGTAACTCCCTCCACT",5,91.53,8.76,-2,0.06,2.92,1.06,0,">1 nonsynonymous","N64R K87L Y119G F160A",4
"lib1","SARS-CoV-2","AGTAACTCTATCACAT",3,31.56,10.72,-0.04,0.08,2.92,1.06,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","AGTAACTCTGAAAAGC",9,54.58,6,-4.76,1.33,1.5,1.15,0.03,">1 nonsynonymous","L5H S29M R78K V103L N120L",5
"lib1","SARS-CoV-2","AGTAACTCTGAGGAAT",1,17.19,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","R73K D90Y R127H F134R Q144K",5
"lib1","SARS-CoV-2","AGTAACTGAAGAGGTG",2,31.96,6.85,-3.92,0.35,1.5,1.06,0.02,">1 nonsynonymous","N58V P82R",2
"lib1","SARS-CoV-2","AGTAACTGCCGAGAGA",2,8.84,6.58,-4.18,1.42,1.5,1.25,0.05,">1 nonsynonymous","N92T C158S T170S S200Q",4
"lib1","SARS-CoV-2","AGTAACTGTCTCAGCC",3,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70M A81V V115Y L122N",4
"lib1","SARS-CoV-2","AGTAACTTATATCCCC",1,40.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39N D75E G101D T148S",4
"lib1","SARS-CoV-2","AGTAAGAACTTATGGT",14,152.58,10.63,-0.13,0.07,2.82,1.08,0,"1 nonsynonymous","K198I",1
"lib1","SARS-CoV-2","AGTAAGAAGTTACCTC",16,86.36,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8P A14Y T100P K198G",4
"lib1","SARS-CoV-2","AGTAAGAATCATAATG",8,25.03,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I2D F12E W23S S41V R78S C102R",6
"lib1","SARS-CoV-2","AGTAAGACACGAAGAG",5,103.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P54E I104W F167E",3
"lib1","SARS-CoV-2","AGTAAGACAGTTAACG",1,15.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F8S Y21P D97V R136I Q144V",5
"lib1","SARS-CoV-2","AGTAAGACCATTCGAA",1,220.27,10.52,-0.25,0.04,2.85,1.03,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","AGTAAGATAAGCTATA",1,22.08,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D98E V181D",2
"lib1","SARS-CoV-2","AGTAAGATTCTCTATA",4,93.69,8.88,-1.88,0.08,2.17,1.18,0,">1 nonsynonymous","V37S T85F D97V I142A",4
"lib1","SARS-CoV-2","AGTAAGCAATGGTTTC",4,0.08,NA,NA,NA,NA,NA,NA,"stop","P7V V37R I142*",3
"lib1","SARS-CoV-2","AGTAAGCCGCATGAAC",1,16.62,8.29,-2.47,0.17,2.58,1.12,0.01,">1 nonsynonymous","C31V Y119M",2
"lib1","SARS-CoV-2","AGTAAGCTAACACACT",1,25.84,10.8,0.03,0.1,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTAAGCTCGTTCTTA",3,59.78,10.75,-0.01,0.09,2.92,1.07,0,">1 nonsynonymous","V37G T140R",2
"lib1","SARS-CoV-2","AGTAAGCTTAGCAGGT",10,69.66,10.16,-0.61,0.07,2.85,1.01,0,">1 nonsynonymous","L60V N107P",2
"lib1","SARS-CoV-2","AGTAAGCTTTCCATCA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","I80M W106Q N110* P169L",4
"lib1","SARS-CoV-2","AGTAAGGACAACGCAT",2,48.76,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5W N64F Y91I Y119L P177Q A190L",6
"lib1","SARS-CoV-2","AGTAAGGCCTAGCATT",3,52.69,10.78,0.01,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAGGCGGATATGA",1,81.77,10.65,-0.12,0.06,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAGGGCGCCAGGA",2,30.83,10.63,-0.14,0.06,2.93,1.03,0,">1 nonsynonymous","I104W K199E",2
"lib1","SARS-CoV-2","AGTAAGGGGCAAAAGC",8,127.18,10.28,-0.49,0.03,2.89,1.01,0,">1 nonsynonymous","Q84A P133R T201A",3
"lib1","SARS-CoV-2","AGTAAGGGTCACCGGG",3,54.28,8.56,-2.21,0.18,1.83,1.15,0.01,">1 nonsynonymous","A18S D112V Q144S",3
"lib1","SARS-CoV-2","AGTAAGGGTCAGAGGA",10,3.41,NA,NA,NA,NA,NA,NA,"stop","K48* G86T",2
"lib1","SARS-CoV-2","AGTAAGGTAATCGTTT",6,382.32,6.38,-4.39,0.36,1.5,1.13,0.01,">1 nonsynonymous","G86F K199Y",2
"lib1","SARS-CoV-2","AGTAAGGTATATTGCG",9,48.45,6.27,-4.49,0.85,1.5,1.27,0.04,">1 nonsynonymous","L57S W106C P197M T201N",4
"lib1","SARS-CoV-2","AGTAAGGTCTTAATTT",3,21.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3S N58F V65Y N92M Y165T",5
"lib1","SARS-CoV-2","AGTAAGTACTCAATTC",7,99.74,10.04,-0.73,0.06,2.65,1.03,0,">1 nonsynonymous","F12L T55L Y91L",3
"lib1","SARS-CoV-2","AGTAAGTCCCCCACCA",1,5.49,9.2,-1.56,0.34,2.3,1.08,0.02,">1 nonsynonymous","Y35Q C61N N109G",3
"lib1","SARS-CoV-2","AGTAAGTGAAAAAGTT",10,67.95,6.42,-4.34,0.6,1.5,1.19,0.03,">1 nonsynonymous","D34G L57T F134K",3
"lib1","SARS-CoV-2","AGTAAGTGAGATTTAG",1,40.23,10.76,0,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAGTTAATTTGGT",3,2.3,NA,NA,NA,NA,NA,NA,"stop","V37D D68* T100*",3
"lib1","SARS-CoV-2","AGTAAGTTCGTCAACA",4,90.38,10.83,0.06,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAAGTTGTTACACA",3,10.63,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","T85L G101D N107Y K132Y",4
"lib1","SARS-CoV-2","AGTAATAAAAACGTAA",6,60.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D P149R",2
"lib1","SARS-CoV-2","AGTAATAAAGACCGCA",1,44.99,9.05,-1.71,0.11,2.09,1.12,0.01,">1 nonsynonymous","N30I G174W",2
"lib1","SARS-CoV-2","AGTAATAAATTAACTT",2,0,NA,NA,NA,NA,NA,NA,"stop","W23S S45*",2
"lib1","SARS-CoV-2","AGTAATAACATACATA",2,13.66,9.69,-1.07,0.47,1.5,1,0.08,">1 nonsynonymous","Q84W G117W",2
"lib1","SARS-CoV-2","AGTAATAACATATAAG",1,10.46,6,-4.76,2,3,1.01,0,">1 nonsynonymous","T63S S113E N120K F185T",4
"lib1","SARS-CoV-2","AGTAATAAGAAATTGA",4,38.32,8.96,-1.8,0.21,1.5,1.17,0.02,">1 nonsynonymous","D97N A105Q",2
"lib1","SARS-CoV-2","AGTAATAAGTGCGATT",2,37.47,10.4,-0.36,0.06,2.94,1,0,">1 nonsynonymous","P7V I138T",2
"lib1","SARS-CoV-2","AGTAATAATTAAATAA",6,2.53,NA,NA,NA,NA,NA,NA,"stop","D34N Y91* H189* T201L",4
"lib1","SARS-CoV-2","AGTAATACAGCAAACT",1,17.04,8.35,-2.42,0.17,2.4,1.18,0.01,">1 nonsynonymous","R78G Y175S",2
"lib1","SARS-CoV-2","AGTAATACCACCAGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40G G86T",2
"lib1","SARS-CoV-2","AGTAATACGATAGCTA",4,71.12,10.5,-0.27,0.06,2.76,1.03,0,">1 nonsynonymous","S129F P149E",2
"lib1","SARS-CoV-2","AGTAATACGCAACAAA",4,51.94,9.71,-1.06,0.11,1.97,1.05,0,">1 nonsynonymous","L57R N120F",2
"lib1","SARS-CoV-2","AGTAATAGAAAGACCG",6,86.24,8.81,-1.95,0.09,2.69,1.09,0,">1 nonsynonymous","T46D L111H N157D",3
"lib1","SARS-CoV-2","AGTAATAGGCATCAAT",9,3.11,NA,NA,NA,NA,NA,NA,"stop","F8* I142S C158Y S184I",4
"lib1","SARS-CoV-2","AGTAATAGGCTCTACC",7,20.28,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9K L95D",2
"lib1","SARS-CoV-2","AGTAATAGTCTAAAAC",1,34.11,6,-4.76,0.54,1.5,1.08,0,">1 nonsynonymous","F8S A67F Y143C",3
"lib1","SARS-CoV-2","AGTAATATAAAAAACT",1,97.84,9.87,-0.9,0.1,2.39,1.06,0,">1 nonsynonymous","A14L K56E T63L N110L Y178F",5
"lib1","SARS-CoV-2","AGTAATATAATAGCAT",2,83.23,10.7,-0.06,0.04,2.95,1.04,0,"1 nonsynonymous","R16G",1
"lib1","SARS-CoV-2","AGTAATATGATAACAC",9,29.88,8.15,-2.62,0.51,1.5,1,0.08,">1 nonsynonymous","R16Y V103K",2
"lib1","SARS-CoV-2","AGTAATATTGGCGGCG",2,33.76,10.79,0.02,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAATCAAACTTCCA",4,20.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53H Y93M",2
"lib1","SARS-CoV-2","AGTAATCAACGCACAA",4,70.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K48M S69P Y175I",3
"lib1","SARS-CoV-2","AGTAATCAATCTTAAA",5,98.87,6.58,-4.18,0.26,1.5,1.11,0.01,">1 nonsynonymous","C61E C150L",2
"lib1","SARS-CoV-2","AGTAATCACAGATTTT",4,53.49,10.51,-0.25,0.06,2.9,1.04,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","AGTAATCATGCACCGT",7,0.23,NA,NA,NA,NA,NA,NA,"stop","G51L K94* N110M K199L",4
"lib1","SARS-CoV-2","AGTAATCCTACAGTGA",9,61.96,9.29,-1.47,0.25,1.5,1.03,0.03,">1 nonsynonymous","A14S G51V N151V",3
"lib1","SARS-CoV-2","AGTAATGAAAAAATCT",3,6.62,9.8,-0.97,0.23,2.35,1.08,0.02,">1 nonsynonymous","D97R P133I",2
"lib1","SARS-CoV-2","AGTAATGAAACTCCTT",3,52.98,10.27,-0.5,0.06,2.84,1.09,0,">1 nonsynonymous","T55C Y123S",2
"lib1","SARS-CoV-2","AGTAATGAACAAACGG",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W F44V K48N F99A R136I",5
"lib1","SARS-CoV-2","AGTAATGAAGACTGGC",1,52.15,10.32,-0.44,0.05,2.86,1.04,0,">1 nonsynonymous","K56D N64R Y123V T140R",4
"lib1","SARS-CoV-2","AGTAATGTAAATATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R G116K L125V",3
"lib1","SARS-CoV-2","AGTAATGTGTAGATCC",1,22.46,10.76,0,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAATTAAAATACTA",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V L60P",2
"lib1","SARS-CoV-2","AGTAATTAACATCTAT",3,3.99,NA,NA,NA,NA,NA,NA,"stop","E10G Y91T P96S R124P C150T Y178* A192G",7
"lib1","SARS-CoV-2","AGTAATTAAGATCTAT",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q C49L A81T Y123G K199W",5
"lib1","SARS-CoV-2","AGTAATTACCTGATCA",2,33.13,10.72,-0.04,0.07,2.93,1.02,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","AGTAATTAGATTAAAA",7,80.6,10.33,-0.43,0.06,2.77,1,0,">1 nonsynonymous","N1M P133S",2
"lib1","SARS-CoV-2","AGTAATTAGGTTTTTC",4,31.31,10.59,-0.17,0.1,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAATTAGTTCATTC",8,42.38,7.48,-3.28,0.38,1.5,1,0.05,">1 nonsynonymous","D97P G116L N157F",3
"lib1","SARS-CoV-2","AGTAATTATCATAACT",1,25.14,10.47,-0.29,0.1,2.77,1.02,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","AGTAATTTACGGTATT",3,71.58,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","E10P Y119K F126E T170S",4
"lib1","SARS-CoV-2","AGTAATTTATAAGATT",3,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P169N P191R",2
"lib1","SARS-CoV-2","AGTACAAAAACCGGAT",2,29.63,6.05,-4.71,0.62,1.5,1.1,0.01,">1 nonsynonymous","T15R N107R K114T Q176H",4
"lib1","SARS-CoV-2","AGTACAAAAAGCGGAC",8,84.03,6.78,-3.99,0.4,1.5,1.22,0.03,">1 nonsynonymous","Y143K F156T T201P",3
"lib1","SARS-CoV-2","AGTACAAAACACCCTA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R F44C F62L D68R N92L V103T Y123K Q144V F160M P177M L183P",11
"lib1","SARS-CoV-2","AGTACAAACGAAAACA",11,117.75,9.98,-0.78,0.08,2.37,1.06,0,">1 nonsynonymous","A67L W106L T201N",3
"lib1","SARS-CoV-2","AGTACAAAGCATTTAG",8,94.29,8.77,-1.99,0.14,2.11,1.17,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","AGTACAAATATCCGCA",2,32.38,10.41,-0.35,0.05,2.86,1,0,">1 nonsynonymous","S139Q Q163Y G174R",3
"lib1","SARS-CoV-2","AGTACAACAACAGCTG",2,5.25,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N40V D59G G101R",3
"lib1","SARS-CoV-2","AGTACAACATGCACGA",4,97.77,9.74,-1.02,0.12,2.32,1.06,0.01,">1 nonsynonymous","C6T S53W",2
"lib1","SARS-CoV-2","AGTACAACCGACTTCT",1,24.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D68K G83R",2
"lib1","SARS-CoV-2","AGTACAACTCCTGATC",10,9.76,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A18K V103N F156V P191I",4
"lib1","SARS-CoV-2","AGTACAAGACGTTGAT",4,28.04,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G101R N107Y",2
"lib1","SARS-CoV-2","AGTACAATATACTTGT",11,57.09,6,-4.76,2,3,1.2,0,">1 nonsynonymous","I28V Y35A C49M Y121T K128V G152S",6
"lib1","SARS-CoV-2","AGTACAATCTGAGTTG",4,56.37,7.17,-3.59,0.35,1.5,1.19,0.04,">1 nonsynonymous","G9S C31N S43P K56I C61D C158L",6
"lib1","SARS-CoV-2","AGTACAATGTAACTTA",1,1.27,NA,NA,NA,NA,NA,NA,"stop","T15Y N120* S139T",3
"lib1","SARS-CoV-2","AGTACAATTACTTCAC",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L A42V K56L K94V D98M",5
"lib1","SARS-CoV-2","AGTACACAGAGCTTAT",1,44.62,9.5,-1.27,0.07,2.84,1.06,0,">1 nonsynonymous","G117D Y123K L188P G196I",4
"lib1","SARS-CoV-2","AGTACACATTGCAGCA",7,71.17,8.63,-2.14,0.12,2.93,1.04,0,">1 nonsynonymous","S36R Y119G G155D",3
"lib1","SARS-CoV-2","AGTACACCGAAGGACG",8,64.95,6,-4.76,2,1.7,1.13,0.01,">1 nonsynonymous","F12G A67D",2
"lib1","SARS-CoV-2","AGTACACCTGATTACC",1,22.22,10.64,-0.13,0.19,2.81,1,0.01,">1 nonsynonymous","G9S S41C",2
"lib1","SARS-CoV-2","AGTACACCTTACCACC",1,13.6,10.12,-0.64,0.25,2.25,1.02,0.02,">1 nonsynonymous","F99V L122E I138T",3
"lib1","SARS-CoV-2","AGTACACGGCAACTAT",1,46.35,10.73,-0.04,0.09,2.87,1.06,0,"1 nonsynonymous","V115T",1
"lib1","SARS-CoV-2","AGTACACTAGGATATA",2,19.02,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C6K S41L K87L Y93C R124T C158N",6
"lib1","SARS-CoV-2","AGTACACTGGAATTAT",3,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N V77Y Q84H I104N G117N",5
"lib1","SARS-CoV-2","AGTACACTTAAGGGGG",14,260.28,7.62,-3.14,0.21,1.5,1.11,0.01,">1 nonsynonymous","N64E L95F Y175H",3
"lib1","SARS-CoV-2","AGTACAGAATGTTACG",1,18.34,10.75,-0.01,0.15,2.84,1.08,0,">1 nonsynonymous","C61Q T85S T140L",3
"lib1","SARS-CoV-2","AGTACAGACTACGAAC",2,23.65,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9L G101N G117W",3
"lib1","SARS-CoV-2","AGTACAGCATCACGGG",3,28.72,9.98,-0.79,0.15,2.05,1.05,0.01,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","AGTACAGCCATCAATT",2,30.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89G V173S G196D",3
"lib1","SARS-CoV-2","AGTACAGCCTATACCC",10,3.78,NA,NA,NA,NA,NA,NA,"stop","P7* V77R D98Y S147C N151D G196E",6
"lib1","SARS-CoV-2","AGTACAGGACCAACGG",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P K56G G83D L95G S129L",5
"lib1","SARS-CoV-2","AGTACAGGGAATGATC",3,21.41,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y93A E141L F167D R179T",4
"lib1","SARS-CoV-2","AGTACAGTAAAAATCG",3,24.76,10.8,0.04,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACAGTACCTTGCT",7,49.76,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","T100P T148S Y175A",3
"lib1","SARS-CoV-2","AGTACAGTCCTGGAGC",8,95,10.34,-0.42,0.04,2.84,1.05,0,">1 nonsynonymous","N40V L60M",2
"lib1","SARS-CoV-2","AGTACAGTTGAAGGAA",4,75.68,10.81,0.05,0.04,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACATAAGTTAGGA",2,13.07,8.08,-2.69,0.25,1.5,1.13,0.02,">1 nonsynonymous","N24R S41V C61G I104A G146T",5
"lib1","SARS-CoV-2","AGTACATAGTCATGAA",2,14.79,8.41,-2.36,0.18,1.69,1.08,0.02,">1 nonsynonymous","D59S D68T F156L",3
"lib1","SARS-CoV-2","AGTACATATGAACATC",5,25.92,8.27,-2.5,0.18,1.62,1.06,0.01,">1 nonsynonymous","C31S C61Y P149S Q168V",4
"lib1","SARS-CoV-2","AGTACATCAGACAATA",2,4.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198Y",1
"lib1","SARS-CoV-2","AGTACATGATTAAATA",2,10.68,10.71,-0.05,0.1,2.94,1,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","AGTACATGTGTGCCAT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","D90F F99*",2
"lib1","SARS-CoV-2","AGTACATTAATCTTAT",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A S45T C61Q G166C K198F",5
"lib1","SARS-CoV-2","AGTACATTCACACCAC",8,84.24,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23E V32P D97T L131V",4
"lib1","SARS-CoV-2","AGTACCAAAACATATA",11,259.93,10.8,0.03,0.05,2.9,1.05,0,"1 nonsynonymous","K26T",1
"lib1","SARS-CoV-2","AGTACCAAACAATTGT",2,35.42,7.77,-2.99,0.32,1.5,1.16,0.03,">1 nonsynonymous","G83I G155M T170K S200P",4
"lib1","SARS-CoV-2","AGTACCAACTAAGAGC",3,98,10.21,-0.55,0.06,2.86,1.01,0,">1 nonsynonymous","T15N S113A G174S",3
"lib1","SARS-CoV-2","AGTACCAATCCAATAA",1,25.67,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N58V N107Y",2
"lib1","SARS-CoV-2","AGTACCAGAATATGGA",7,119.84,10.75,-0.02,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACCATATGACTCG",1,29.81,10.82,0.06,0.11,2.83,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACCATATTCTGCT",2,14.02,6.53,-4.23,0.3,1.5,1.05,0.01,">1 nonsynonymous","V11S S41T Y66D D75G T100K A145T",6
"lib1","SARS-CoV-2","AGTACCCAACCGGTAT",2,22.73,7.47,-3.29,0.43,1.5,1.01,0.06,">1 nonsynonymous","G9L D90H T148V V181Y",4
"lib1","SARS-CoV-2","AGTACCCAACTGACAG",4,12.06,6.68,-4.09,0.62,1.5,1.13,0.07,"1 nonsynonymous","V180R",1
"lib1","SARS-CoV-2","AGTACCCATCTCACCC",5,83.73,10.7,-0.06,0.04,2.95,1.01,0,">1 nonsynonymous","F44W G83R",2
"lib1","SARS-CoV-2","AGTACCCCCTAGATTA",9,75.83,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P54A S139W G166S R179A",4
"lib1","SARS-CoV-2","AGTACCCCGCACAAAT",2,1.12,NA,NA,NA,NA,NA,NA,"stop","T55R A89R L95G V115* L122E S147F C195T",7
"lib1","SARS-CoV-2","AGTACCCTGAGGTCAA",5,28.9,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14C V37I G86V F99K",4
"lib1","SARS-CoV-2","AGTACCGAACAACGAT",3,1.23,NA,NA,NA,NA,NA,NA,"stop","C102N N130*",2
"lib1","SARS-CoV-2","AGTACCGCAAGAACCA",5,92.97,10.73,-0.04,0.05,2.97,1.02,0,"1 nonsynonymous","Y35I",1
"lib1","SARS-CoV-2","AGTACCGCAGGTATTC",8,3.09,NA,NA,NA,NA,NA,NA,"stop","S41E L57* N64T P161S L188H",5
"lib1","SARS-CoV-2","AGTACCGCCAGAGATT",3,90.85,10.72,-0.04,0.07,2.9,1.07,0,"1 nonsynonymous","D97H",1
"lib1","SARS-CoV-2","AGTACCGCGCGATTAA",2,11.47,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","Y21K",1
"lib1","SARS-CoV-2","AGTACCGGCTTAGACA",4,104.09,10.76,0,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACCGGGAAATAGG",2,8.17,9.97,-0.8,0.21,2.48,1.01,0.02,">1 nonsynonymous","C61T F126L G152T",3
"lib1","SARS-CoV-2","AGTACCGGGATTTCGA",5,31.75,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","G86R F99I F126V",3
"lib1","SARS-CoV-2","AGTACCTAAATCACCT",1,22.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E I80Q",2
"lib1","SARS-CoV-2","AGTACCTACCCACTAT",4,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M W106T I142C S200V",4
"lib1","SARS-CoV-2","AGTACCTACTTATGAA",6,42.91,9.73,-1.03,0.33,1.5,1,0.04,"1 nonsynonymous","A105K",1
"lib1","SARS-CoV-2","AGTACCTAGGATCATA",13,1.6,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib1","SARS-CoV-2","AGTACCTATAAACAAA",5,4.23,NA,NA,NA,NA,NA,NA,"stop","N13Q S45* G86L V103K",4
"lib1","SARS-CoV-2","AGTACCTCAGTACTAG",5,98.15,10.81,0.04,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACCTCGCCCTTGA",1,5.04,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T140S P149H L183S",3
"lib1","SARS-CoV-2","AGTACCTCGTAACCGA",5,54.58,10.26,-0.5,0.07,2.7,1.02,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","AGTACCTTACGCGATT",10,52.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N92E K128T P149N",3
"lib1","SARS-CoV-2","AGTACCTTAGATAAAG",3,18.84,10.74,-0.02,0.12,2.81,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTACCTTGTAAACTT",5,22.16,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N40S G86S N118L S184Y",4
"lib1","SARS-CoV-2","AGTACGAAACCCGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30L F99V E141S S164T",4
"lib1","SARS-CoV-2","AGTACGAACATAAAAG",4,37.1,10.66,-0.1,0.07,2.85,1.07,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","AGTACGAAGTAAGTTT",4,60.27,10.75,-0.02,0.06,2.98,1,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","AGTACGAATTCTAATT",3,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55M D90S D112S T170L",4
"lib1","SARS-CoV-2","AGTACGACATAGTATA",4,37.28,6,-4.76,1.31,1.5,1.12,0.01,">1 nonsynonymous","R16L N107I K128D R136V I142L P197A",6
"lib1","SARS-CoV-2","AGTACGACCAAAGACC",2,18.53,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S36R A67N P133L",3
"lib1","SARS-CoV-2","AGTACGAGACCCACAA",14,87.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6K S29I P161G",3
"lib1","SARS-CoV-2","AGTACGATACTCCCCC",4,0.9,NA,NA,NA,NA,NA,NA,"stop","L5W P82Y T85* C102L R179S",5
"lib1","SARS-CoV-2","AGTACGATTAAAAACT",9,107.04,6.24,-4.53,0.37,1.5,1.12,0.01,">1 nonsynonymous","N13L N64F Y175S",3
"lib1","SARS-CoV-2","AGTACGCAGGTTTAAT",2,35.97,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","Y91T P96M A105I",3
"lib1","SARS-CoV-2","AGTACGCTATTGCAAT",3,25.62,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C6H A22K T55Y C61I F99W Y119L T148N",7
"lib1","SARS-CoV-2","AGTACGCTCTACGTCA",1,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112K",1
"lib1","SARS-CoV-2","AGTACGCTCTACTAAT",2,11.07,7.71,-3.06,0.11,1.5,1.06,0.01,">1 nonsynonymous","D68W K128H",2
"lib1","SARS-CoV-2","AGTACGCTCTAGAAGG",11,107.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V32R L38T F44T D112K",4
"lib1","SARS-CoV-2","AGTACGCTTGTATTTA",2,26.09,9.51,-1.26,0.1,2.61,1.14,0,"1 nonsynonymous","Y123E",1
"lib1","SARS-CoV-2","AGTACGGAAAACTTAC",1,15.97,10.62,-0.15,0.1,2.96,1.05,0,">1 nonsynonymous","G83K I104L",2
"lib1","SARS-CoV-2","AGTACGGAAAAGGCTA",1,32.03,10.91,0.14,0.09,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTACGGAACCTCCAA",14,61.69,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T55L F62E G86C V173S",4
"lib1","SARS-CoV-2","AGTACGGACTTAGAAA",1,26.22,10.53,-0.24,0.06,2.8,1.11,0,">1 nonsynonymous","N120V I142M",2
"lib1","SARS-CoV-2","AGTACGGCAATAATAG",1,7.12,9.93,-0.84,0.18,2.15,1.1,0.01,">1 nonsynonymous","C102V T140R",2
"lib1","SARS-CoV-2","AGTACGGTTAAGCACA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib1","SARS-CoV-2","AGTACGTACCGATAAA",4,20.56,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D68P P96C A105S L188T",4
"lib1","SARS-CoV-2","AGTACGTGGACTTAAA",3,99.23,9.59,-1.17,0.11,2.22,1.07,0.01,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","AGTACGTTCTTGGCGC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T L122E",2
"lib1","SARS-CoV-2","AGTACTAAATTCAAAA",7,56.14,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S108G Y159A T201L",3
"lib1","SARS-CoV-2","AGTACTAAATTTGCTT",9,41.51,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86V D137S",2
"lib1","SARS-CoV-2","AGTACTAACAAGCGTT",2,12.44,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A42N T100L P133S C150M F167T",5
"lib1","SARS-CoV-2","AGTACTAAGGAATCGA",2,19.14,10.94,0.17,0.11,2.93,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGTACTACACAAGACG",6,76.67,10.79,0.03,0.07,2.92,1.06,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","AGTACTACTAAGAAAA",9,194.81,10.16,-0.61,0.04,2.74,1.05,0,"1 nonsynonymous","S108V",1
"lib1","SARS-CoV-2","AGTACTAGCAGTACCA",4,6.18,10.3,-0.47,0.2,2.63,1,0.02,"1 nonsynonymous","F47A",1
"lib1","SARS-CoV-2","AGTACTATATAATCAA",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y S164V",2
"lib1","SARS-CoV-2","AGTACTATCGAAAAAA",5,60.98,8.72,-2.05,0.08,2.77,1.19,0,">1 nonsynonymous","R73I K87I",2
"lib1","SARS-CoV-2","AGTACTATGTAGCGGC",5,2.06,NA,NA,NA,NA,NA,NA,"stop","T3I F44M S113T V173*",4
"lib1","SARS-CoV-2","AGTACTATTAATTATC",1,9.97,6.83,-3.93,0.65,1.5,1.24,0.07,"1 nonsynonymous","A89W",1
"lib1","SARS-CoV-2","AGTACTATTTACCTAA",5,44.74,10.24,-0.52,0.05,2.9,1,0,">1 nonsynonymous","L60N V173G",2
"lib1","SARS-CoV-2","AGTACTCAAGTAGGAA",5,1.67,NA,NA,NA,NA,NA,NA,"stop","I80M K87*",2
"lib1","SARS-CoV-2","AGTACTCATCCCCACC",5,0.12,NA,NA,NA,NA,NA,NA,"stop","K87* F167C",2
"lib1","SARS-CoV-2","AGTACTCCATAAACCA",3,10.54,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49T D97R V103M G146F",4
"lib1","SARS-CoV-2","AGTACTCGCATAAGGA",10,119.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25N F70M Y91P E135P",4
"lib1","SARS-CoV-2","AGTACTCGTATGATTT",7,98,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12I V32C D68K N92T N107L Y119P",6
"lib1","SARS-CoV-2","AGTACTCTGCGACAAA",1,18.32,10.75,-0.02,0.08,2.8,1,0,">1 nonsynonymous","D59S N130W",2
"lib1","SARS-CoV-2","AGTACTCTTATTATGA",2,93.55,6,-4.76,0.72,1.5,1.18,0.01,">1 nonsynonymous","N64I C150V",2
"lib1","SARS-CoV-2","AGTACTGAAGCTGGCC",9,196.08,9.1,-1.66,0.06,2.82,1.08,0,">1 nonsynonymous","K56S G117A F160D",3
"lib1","SARS-CoV-2","AGTACTGACGCCTTAT",2,94.64,10.73,-0.04,0.06,2.84,1.09,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","AGTACTGAGGTGATAG",2,38.53,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35S T85V N120S G172D V182L",5
"lib1","SARS-CoV-2","AGTACTGTCAACGAGT",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I T201L",2
"lib1","SARS-CoV-2","AGTACTTAAAAGACCG",4,3.42,NA,NA,NA,NA,NA,NA,"stop","L60* G86C N92H",3
"lib1","SARS-CoV-2","AGTACTTAACCTATAA",2,52.33,8.41,-2.36,0.25,2,1.18,0.02,">1 nonsynonymous","Y35V L122V N157Y",3
"lib1","SARS-CoV-2","AGTACTTAGGTGCGAC",3,17.15,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","G83C P96M R127I Y143R",4
"lib1","SARS-CoV-2","AGTACTTCAACTGGAT",17,225.57,10.61,-0.16,0.03,2.9,1.06,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","AGTACTTGCAACCCAT",2,0.72,NA,NA,NA,NA,NA,NA,"stop","C61I Y66L K114* G146S F185I",5
"lib1","SARS-CoV-2","AGTACTTTCAGGACAA",2,38.96,10.18,-0.58,0.04,2.97,1.01,0,">1 nonsynonymous","N120H T170Q",2
"lib1","SARS-CoV-2","AGTACTTTCCAAACTG",2,22.51,6.03,-4.74,1.16,1.5,1.11,0.03,">1 nonsynonymous","V103F N151D",2
"lib1","SARS-CoV-2","AGTAGAAAAATGCAAT",12,210.81,10.2,-0.57,0.05,2.8,1.02,0,">1 nonsynonymous","Y66R L122F",2
"lib1","SARS-CoV-2","AGTAGAAAACAGAATT",1,38.75,9.57,-1.19,0.1,2.2,1.04,0,">1 nonsynonymous","A18V G83T V173L",3
"lib1","SARS-CoV-2","AGTAGAAACCATATTC",4,90.64,10.7,-0.07,0.07,2.91,1.04,0,">1 nonsynonymous","G9E P54T",2
"lib1","SARS-CoV-2","AGTAGAAATAACTGCC",5,91.3,10.62,-0.14,0.04,2.8,1.07,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","AGTAGAAATACTCTAA",7,79.74,6.34,-4.42,0.63,1.5,1.2,0.02,">1 nonsynonymous","I88K G117R P177T",3
"lib1","SARS-CoV-2","AGTAGAACAACTACGG",2,81.86,10.79,0.03,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAGAACTTATGGGT",5,42.79,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44T T55I N107I Y119G",4
"lib1","SARS-CoV-2","AGTAGAAGCTCTAATT",1,40.56,9.2,-1.56,0.1,2.66,1.19,0,">1 nonsynonymous","N120P S200C",2
"lib1","SARS-CoV-2","AGTAGAATAAGAAAAG",8,1.23,NA,NA,NA,NA,NA,NA,"stop","A14G C61L V77* N109S",4
"lib1","SARS-CoV-2","AGTAGAATACTTCTAA",7,35.06,7.6,-3.17,0.43,1.5,1.14,0.04,">1 nonsynonymous","G51Y P82T D112H P191L",4
"lib1","SARS-CoV-2","AGTAGAATTCTCGAAG",2,57.29,10.82,0.06,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAGACAAATGAATA",12,65.14,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y35S K87L R127L C158S",4
"lib1","SARS-CoV-2","AGTAGACAAATTCATT",2,25.42,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","S45Y T55D Q163S R179G",4
"lib1","SARS-CoV-2","AGTAGACAGAGAACCA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","A42T F47A G86Y S113* S200F",5
"lib1","SARS-CoV-2","AGTAGACATGTTTCTG",2,19.73,9.68,-1.08,0.19,2.12,1.15,0.02,">1 nonsynonymous","N64K F134T E154G S200R",4
"lib1","SARS-CoV-2","AGTAGACGCCACCCTA",1,20.78,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","D90N V103L T140L F156T P177G",5
"lib1","SARS-CoV-2","AGTAGAGAATGATCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","L125* F167R K198V",3
"lib1","SARS-CoV-2","AGTAGAGACGAATAAT",3,0.88,NA,NA,NA,NA,NA,NA,"stop","Y35* P96M V115E S129Y",4
"lib1","SARS-CoV-2","AGTAGAGGACTGACTG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","F12Y V20S S29* L60* R127P",5
"lib1","SARS-CoV-2","AGTAGAGTACACATGG",2,5.77,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N92I N151K G155Y",3
"lib1","SARS-CoV-2","AGTAGAGTACACTCGA",9,2.43,NA,NA,NA,NA,NA,NA,"stop","S45L I72* G83D L162I V173* A190V",6
"lib1","SARS-CoV-2","AGTAGAGTAGGTTATG",4,6.19,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A33N T85F A105E Y143I",4
"lib1","SARS-CoV-2","AGTAGAGTATACCCAT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","E10S D112W N120* I138L G174R",5
"lib1","SARS-CoV-2","AGTAGATAAAACCATC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9T P82Q Y119* R127S P149Y S200L",6
"lib1","SARS-CoV-2","AGTAGATAAGACTATG",5,1.94,NA,NA,NA,NA,NA,NA,"stop","D34W K56* N130S T170M V181Y",5
"lib1","SARS-CoV-2","AGTAGATATTAAAGAG",15,115.87,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","R27W D68K N118L F160I T201S",5
"lib1","SARS-CoV-2","AGTAGATATTACGCAT",3,74.7,7.11,-3.65,0.32,1.5,1.22,0.02,">1 nonsynonymous","V32N G146A N157C",3
"lib1","SARS-CoV-2","AGTAGATCATCGTTAC",6,0.57,NA,NA,NA,NA,NA,NA,"stop","D34G T46I D112* S139N N157T",5
"lib1","SARS-CoV-2","AGTAGATTACATAGAT",3,13.84,8.74,-2.03,0.4,1.5,1.04,0.07,">1 nonsynonymous","G51S Y165I",2
"lib1","SARS-CoV-2","AGTAGATTGAAATTCG",7,102.6,6,-4.76,1.07,1.5,1.18,0.01,">1 nonsynonymous","N120P N157K",2
"lib1","SARS-CoV-2","AGTAGCAACGTTCGAG",4,63.11,6,-4.76,1.11,1.5,1.2,0.02,">1 nonsynonymous","R27P Y35C Y91K",3
"lib1","SARS-CoV-2","AGTAGCAAGTCACTAA",3,15.16,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","D34V D112S G146P P191S",4
"lib1","SARS-CoV-2","AGTAGCAATAAAACGC",1,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F N107F V180H",3
"lib1","SARS-CoV-2","AGTAGCAGGGCTAAGT",2,60.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4T S69G R124Q G166C",4
"lib1","SARS-CoV-2","AGTAGCCAAGACCGAA",3,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R Y165V",2
"lib1","SARS-CoV-2","AGTAGCCAAGCGAAGT",3,29.38,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","G101H",1
"lib1","SARS-CoV-2","AGTAGCCACTAATCCC",1,28.98,10.69,-0.07,0.09,2.93,1.07,0,"1 nonsynonymous","Y39V",1
"lib1","SARS-CoV-2","AGTAGCCCCACATTGG",12,219.42,9.57,-1.2,0.05,2.65,1.09,0,">1 nonsynonymous","K87G E135M",2
"lib1","SARS-CoV-2","AGTAGCCCCTGATGGT",1,11.74,7.62,-3.15,0.15,1.82,1.04,0.01,">1 nonsynonymous","Y39H K87S Y91L D98K F160L",5
"lib1","SARS-CoV-2","AGTAGCCCTACACCCA",5,55.87,9.71,-1.05,0.12,1.77,1.05,0.01,">1 nonsynonymous","C49S I104F",2
"lib1","SARS-CoV-2","AGTAGCCGTCAATAAT",2,15.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25L H189I",2
"lib1","SARS-CoV-2","AGTAGCCTGAGTCACA",1,16.7,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N1D G9R S53L S129M R179M",5
"lib1","SARS-CoV-2","AGTAGCGAACGTATTT",3,78.58,9.36,-1.4,0.06,2.75,1.13,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","AGTAGCGAATGCAGTA",1,0.83,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","AGTAGCGATAGGGATC",9,101.93,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9V F44C C49M F99Y C158T",5
"lib1","SARS-CoV-2","AGTAGCGGCCTAATGC",2,0.69,NA,NA,NA,NA,NA,NA,"stop","N92* P149K",2
"lib1","SARS-CoV-2","AGTAGCTAATCACATT",7,109.61,10.72,-0.05,0.04,2.93,1.05,0,">1 nonsynonymous","K114C K199F",2
"lib1","SARS-CoV-2","AGTAGCTACACAAATT",2,142.07,10.75,-0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAGCTACCTAAGGT",2,70.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2L E10C I72M L95S Y121H",5
"lib1","SARS-CoV-2","AGTAGCTCAAAAAGGA",6,8.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103R T201L",2
"lib1","SARS-CoV-2","AGTAGCTGAATAAATA",1,20.81,6,-4.76,2,1.5,1.21,0.08,">1 nonsynonymous","A22C Y119V R124H G146W",4
"lib1","SARS-CoV-2","AGTAGCTGCAATTAAT",19,223.21,10.8,0.03,0.06,2.91,1.05,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","AGTAGCTTAGAGAGAA",3,15.62,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N1T V20S D98Y K132W",4
"lib1","SARS-CoV-2","AGTAGCTTTACACCTG",8,54.05,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V103W Y123M",2
"lib1","SARS-CoV-2","AGTAGGAAATAGAGAC",5,17.27,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","F70P S200R",2
"lib1","SARS-CoV-2","AGTAGGAAGTAACAAA",6,91.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12K S43T R127I L162H P177A C195R",6
"lib1","SARS-CoV-2","AGTAGGACATAACAAA",6,102.65,10.47,-0.29,0.03,2.87,1.03,0,"1 nonsynonymous","D75T",1
"lib1","SARS-CoV-2","AGTAGGACCGATTACG",3,2.11,NA,NA,NA,NA,NA,NA,"stop","C61* L122R P133*",3
"lib1","SARS-CoV-2","AGTAGGACGATGATTG",6,38.77,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6G A14S T63I C150F",4
"lib1","SARS-CoV-2","AGTAGGAGCTACAGTT",8,38.36,6,-4.76,2,3,1.11,0,">1 nonsynonymous","W23T V115C",2
"lib1","SARS-CoV-2","AGTAGGATCGCTATCT",3,0.58,NA,NA,NA,NA,NA,NA,"stop","L5S F134D N151A F156L Q163*",5
"lib1","SARS-CoV-2","AGTAGGATGATAAACC",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V Q144E N157T L183T",4
"lib1","SARS-CoV-2","AGTAGGCAACCTTAAT",3,64.77,10.36,-0.4,0.05,2.92,1,0,">1 nonsynonymous","T63R L162M",2
"lib1","SARS-CoV-2","AGTAGGCCATTATGTC",4,20.09,6.03,-4.74,0.95,3,1.29,0.03,">1 nonsynonymous","C102S E141G",2
"lib1","SARS-CoV-2","AGTAGGCTAATTACTG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78Y V182S",2
"lib1","SARS-CoV-2","AGTAGGCTATTCGTTT",8,32.78,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28P I104S N120Q",3
"lib1","SARS-CoV-2","AGTAGGCTTTCGTAAT",1,21.94,10.34,-0.42,0.04,2.92,1.03,0,">1 nonsynonymous","V32E T46Q T100K I104F",4
"lib1","SARS-CoV-2","AGTAGGTAATCGGGCT",2,67.14,6.53,-4.23,0.4,1.5,1.09,0.02,">1 nonsynonymous","A14S A22S Q176F",3
"lib1","SARS-CoV-2","AGTAGGTACCGTAGCT",1,8.35,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","C49S Y91R V181A",3
"lib1","SARS-CoV-2","AGTAGGTTGGATGACC",5,28.88,10.57,-0.19,0.06,2.95,1.02,0,"1 nonsynonymous","F44M",1
"lib1","SARS-CoV-2","AGTAGTAACAAACAAC",8,189.09,9.72,-1.04,0.05,2.78,1.06,0,">1 nonsynonymous","R16D I142F P149M E154T",4
"lib1","SARS-CoV-2","AGTAGTACGCGGTACG",7,0.61,NA,NA,NA,NA,NA,NA,"stop","D34S F44Y D97*",3
"lib1","SARS-CoV-2","AGTAGTCGACTAACAT",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R C49V T201K",3
"lib1","SARS-CoV-2","AGTAGTCGCATGCTTA",9,73.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D68Q A89W F99V V181T",4
"lib1","SARS-CoV-2","AGTAGTCTTGGACGGA",5,50.28,6.77,-4,0.41,1.5,1.28,0.02,">1 nonsynonymous","W106C S129F N151Y",3
"lib1","SARS-CoV-2","AGTAGTGAAAAAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R73C N120*",2
"lib1","SARS-CoV-2","AGTAGTGAATGCCCCA",5,70.55,10.82,0.06,0.08,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTAGTGCAAATTAAT",1,22.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I142G T170I H189Y",3
"lib1","SARS-CoV-2","AGTAGTGGTCTCACAA",11,20.84,7.2,-3.56,0.34,1.5,1.13,0.03,">1 nonsynonymous","F8R N64C",2
"lib1","SARS-CoV-2","AGTAGTTAAAATTAAG",2,29.75,9.93,-0.84,0.15,2.5,1.03,0.01,"1 nonsynonymous","V52G",1
"lib1","SARS-CoV-2","AGTAGTTACCAGGTGG",1,29.13,9.97,-0.79,0.09,2.44,1.06,0,">1 nonsynonymous","D75W P149I",2
"lib1","SARS-CoV-2","AGTAGTTAGGTATAAT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","G9* Q144Y G166T K199E",4
"lib1","SARS-CoV-2","AGTAGTTGAAAAAAGG",3,19.03,11.07,0.31,0.12,2.96,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGTAGTTGTATTCCGT",4,49,6.11,-4.66,0.7,1.5,1.2,0.01,">1 nonsynonymous","C31E Y50R T100Q A105T F134Y Y165V",6
"lib1","SARS-CoV-2","AGTAGTTTAAAAAATG",2,7.63,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","V32R G86S A105K T140S F160A",5
"lib1","SARS-CoV-2","AGTAGTTTAAAGTAAG",2,118.39,10.25,-0.52,0.05,2.87,1.01,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","AGTAGTTTTGGTGGCT",2,27.53,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3C N24S L60S S113A P149L Y175I",6
"lib1","SARS-CoV-2","AGTATAAAAGCCCAAA",7,34.99,10.85,0.09,0.1,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATAAACATAAAAA",7,27.65,10.71,-0.06,0.08,2.83,1.12,0,">1 nonsynonymous","T100W S200T",2
"lib1","SARS-CoV-2","AGTATAAACCAGTATG",4,40.51,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F99A P133K G152A",3
"lib1","SARS-CoV-2","AGTATAAAGTTAAGTA",4,12.45,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","K87W G101S P197Q",3
"lib1","SARS-CoV-2","AGTATAAATGCACGAG",2,2.92,NA,NA,NA,NA,NA,NA,"stop","T55Q Q84W L95* N107S",4
"lib1","SARS-CoV-2","AGTATAACGAACAATC",1,20.04,9.06,-1.71,0.29,1.8,1.12,0.06,">1 nonsynonymous","S41V Y91T",2
"lib1","SARS-CoV-2","AGTATAAGGATTAGAT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","K56* A89G Y121P V181M",4
"lib1","SARS-CoV-2","AGTATAAGTCAGAGAC",1,1.73,NA,NA,NA,NA,NA,NA,"stop","K87M Y143* L187Y",3
"lib1","SARS-CoV-2","AGTATAATATGGTCCG",3,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","AGTATAATCAGGAACC",4,22.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6W A33S D34N W106L A192W",5
"lib1","SARS-CoV-2","AGTATAATGGATTCCA",4,0.39,NA,NA,NA,NA,NA,NA,"stop","A14* I28E N110E",3
"lib1","SARS-CoV-2","AGTATAATTATATTTT",3,51.73,10.82,0.05,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATAATTTCCGTCT",6,92.25,10.31,-0.45,0.03,2.85,1.04,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","AGTATACAAAATACGG",10,207.13,10.4,-0.37,0.04,2.88,1.05,0,">1 nonsynonymous","I2S F44R",2
"lib1","SARS-CoV-2","AGTATACACTGGCGAT",1,7.95,8.02,-2.75,0.52,1.5,1,0.06,">1 nonsynonymous","S69V G116W S139F G152H N171Y A190P",6
"lib1","SARS-CoV-2","AGTATACAGTGACAGG",6,110.67,10.63,-0.14,0.05,2.96,1.01,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","AGTATACCCCTCCGAT",4,32.4,10.67,-0.09,0.1,2.84,1.07,0,">1 nonsynonymous","N1P D59M L122M",3
"lib1","SARS-CoV-2","AGTATACCTCGAACTA",6,5.46,NA,NA,NA,NA,NA,NA,"stop","R27L N120* N130A",3
"lib1","SARS-CoV-2","AGTATACCTTAACACT",2,7.2,11.27,0.5,0.14,1.89,1.02,0.01,">1 nonsynonymous","V11G Y35V",2
"lib1","SARS-CoV-2","AGTATACTAACAAGTC",1,27.07,9.84,-0.93,0.06,2.95,1,0,">1 nonsynonymous","S139V G174D",2
"lib1","SARS-CoV-2","AGTATACTAATATAAT",2,27.16,10.06,-0.71,0.11,2.7,1.04,0.01,">1 nonsynonymous","L60M V77L F134K",3
"lib1","SARS-CoV-2","AGTATACTACCACACT",4,19.09,9.6,-1.17,0.2,1.98,1.02,0.02,">1 nonsynonymous","C6R R78F T148Q",3
"lib1","SARS-CoV-2","AGTATACTAGAATGTC",2,50.27,8.82,-1.94,0.11,2.18,1.11,0.01,">1 nonsynonymous","R27Q N107H",2
"lib1","SARS-CoV-2","AGTATACTATAAAAGG",3,27.92,10.78,0.01,0.08,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATACTGAAACTGT",8,18.52,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A67C V103M L125C T148F T170H",5
"lib1","SARS-CoV-2","AGTATACTTACCCCCA",6,114.31,10.83,0.07,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATACTTGTAAGCA",4,78.07,8.82,-1.94,0.06,2.76,1.06,0,">1 nonsynonymous","V37G G146E L188F G196E",4
"lib1","SARS-CoV-2","AGTATAGACCCAGGAC",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28D T46S",2
"lib1","SARS-CoV-2","AGTATAGAGATCACAA",4,18.4,10.42,-0.34,0.09,2.88,1.09,0,"1 nonsynonymous","N4F",1
"lib1","SARS-CoV-2","AGTATAGCGACTTTAG",3,29.47,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","K56H F99H P133H Q163I Y178L",5
"lib1","SARS-CoV-2","AGTATAGCTTAGAGAA",2,38.08,9.88,-0.89,0.09,2.14,1.04,0,"1 nonsynonymous","F8G",1
"lib1","SARS-CoV-2","AGTATAGGTATAGGAC",5,28.99,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","K87T L95P W106E S129V",4
"lib1","SARS-CoV-2","AGTATAGTACTAGAAC",5,64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y121I N157I",2
"lib1","SARS-CoV-2","AGTATAGTATAAACAA",10,191.85,10.2,-0.56,0.06,2.66,1.01,0,">1 nonsynonymous","A22V T85S V194I",3
"lib1","SARS-CoV-2","AGTATAGTGCTTTCGT",5,108.45,10.14,-0.63,0.08,2.74,1,0,"1 nonsynonymous","C31W",1
"lib1","SARS-CoV-2","AGTATAGTTTTAAAAA",8,214.81,10.79,0.02,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTATATAAACGAAAG",2,24.9,8.48,-2.28,0.29,1.5,1.13,0.03,">1 nonsynonymous","G9R L60P Y91L G116L",4
"lib1","SARS-CoV-2","AGTATATAAATCCCAT",2,1.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","AGTATATAAGCTGTAT",4,1.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161E",1
"lib1","SARS-CoV-2","AGTATATACAAATACT",3,64.82,10.86,0.1,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATATAGAAGTATC",6,7.52,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V103R C158R",2
"lib1","SARS-CoV-2","AGTATATATGACAGCT",1,9.52,9.81,-0.96,0.2,1.92,1,0.02,"1 nonsynonymous","D137V",1
"lib1","SARS-CoV-2","AGTATATCAAAGTGCT",3,10.75,9.81,-0.96,0.14,2.53,1.07,0.01,">1 nonsynonymous","L57V G116V",2
"lib1","SARS-CoV-2","AGTATATCCAAGACCT",1,13.9,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","T15S D97A Y178W L183C",4
"lib1","SARS-CoV-2","AGTATATCTTCGAACT",2,24.3,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P7R P96Q F160G G166W",4
"lib1","SARS-CoV-2","AGTATATGAATAGGCA",8,2.77,NA,NA,NA,NA,NA,NA,"stop","A42F G51H G101D N110S K128*",5
"lib1","SARS-CoV-2","AGTATATGAATATACG",12,131.86,10.25,-0.52,0.04,2.87,1.01,0,">1 nonsynonymous","R27D Q84R I138D",3
"lib1","SARS-CoV-2","AGTATATGCAAAAATG",1,2.8,NA,NA,NA,NA,NA,NA,"stop","I28A S36Q G174* K199N",4
"lib1","SARS-CoV-2","AGTATATGGAATCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44S Y123*",2
"lib1","SARS-CoV-2","AGTATATGTGATAGGG",1,24.36,10.77,0,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTATATTAGCGGATC",2,31.33,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","A18N I88R Q176I",3
"lib1","SARS-CoV-2","AGTATATTATAGCTAT",4,88.02,10.77,0,0.08,2.83,1.05,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","AGTATCAAAAACCACG",2,24.36,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I88F G101D N107Q N120T",4
"lib1","SARS-CoV-2","AGTATCAACCAATCGA",3,154.76,10.67,-0.09,0.04,2.88,1.02,0,">1 nonsynonymous","A18E S41Y",2
"lib1","SARS-CoV-2","AGTATCAACCTATGCT",6,22.92,6.71,-4.06,0.73,1.5,1.12,0.07,">1 nonsynonymous","K94A A105L",2
"lib1","SARS-CoV-2","AGTATCAATAACAATG",2,143.55,10.17,-0.59,0.07,2.81,1,0,">1 nonsynonymous","S45L K56A",2
"lib1","SARS-CoV-2","AGTATCAATTACAAAT",12,8.47,NA,NA,NA,NA,NA,NA,"stop","L5R V20S I104* S108A K128S Q176H",6
"lib1","SARS-CoV-2","AGTATCACTGTGTTAG",4,8.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L38A A42N C49T L122P",4
"lib1","SARS-CoV-2","AGTATCAGGGACCCAA",1,14.42,10.42,-0.34,0.07,2.79,1.15,0,">1 nonsynonymous","N1Y S36R A42D",3
"lib1","SARS-CoV-2","AGTATCAGTAGGTGCA",2,9.6,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A18C G101E L122V E186N",4
"lib1","SARS-CoV-2","AGTATCATAACCTATC",9,5.05,NA,NA,NA,NA,NA,NA,"stop","G9* A145* P177R",3
"lib1","SARS-CoV-2","AGTATCATCTAAAACA",4,50.25,10.71,-0.05,0.06,2.94,1.03,0,">1 nonsynonymous","L5K Y35V",2
"lib1","SARS-CoV-2","AGTATCCCAAGAGGGT",2,14.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N30T S69K Y121N N157T",4
"lib1","SARS-CoV-2","AGTATCCGCGGTCCAC",7,169.18,9.79,-0.97,0.03,2.92,1.03,0,">1 nonsynonymous","L5Y Y119F",2
"lib1","SARS-CoV-2","AGTATCCTATAAGAAC",2,47.51,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N1M S45Q G51F Y66L V115S Q168D",6
"lib1","SARS-CoV-2","AGTATCCTGATGGTTC",3,14.68,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T3I R124H N151H",3
"lib1","SARS-CoV-2","AGTATCCTTAACCACT",3,37.29,9.54,-1.22,0.11,1.89,1.05,0.01,">1 nonsynonymous","N64E W106K N151T",3
"lib1","SARS-CoV-2","AGTATCCTTTTAGAAA",9,79.41,8.28,-2.48,0.15,1.63,1.19,0.01,">1 nonsynonymous","C6Y N58C K87S P149L",4
"lib1","SARS-CoV-2","AGTATCGTAATGTTTC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","I2C Y35K D90L R124* Y159W Q168R",6
"lib1","SARS-CoV-2","AGTATCGTTAATCATG",3,6.45,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","W23M W106E",2
"lib1","SARS-CoV-2","AGTATCTCTACAATTG",4,111.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y119R Y175P",2
"lib1","SARS-CoV-2","AGTATCTGCGCTAGAT",4,71.76,10.67,-0.09,0.06,2.94,1.01,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","AGTATCTGTACATTCG",3,93.26,9.3,-1.46,0.05,2.87,1.09,0,">1 nonsynonymous","Q84V G166Q",2
"lib1","SARS-CoV-2","AGTATCTGTTCGATGT",1,19.65,10.71,-0.05,0.08,2.9,1.09,0,"1 nonsynonymous","V52L",1
"lib1","SARS-CoV-2","AGTATCTTTCCCTTCA",1,44.97,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4L Y66N G116S P161M",4
"lib1","SARS-CoV-2","AGTATGAAACACATAA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","S45M D98Y D112M E141*",4
"lib1","SARS-CoV-2","AGTATGAACCACATCC",9,37.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6Q C31P L57R G83D F134L",5
"lib1","SARS-CoV-2","AGTATGAATCTTATAT",3,14.57,10.41,-0.35,0.13,2.77,1,0.01,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","AGTATGAATGAAGTTA",3,77.04,10.71,-0.05,0.05,2.9,1,0,">1 nonsynonymous","A33T N64S",2
"lib1","SARS-CoV-2","AGTATGACAATAGTAA",4,73.72,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N1C F8S F160R Q176Y",4
"lib1","SARS-CoV-2","AGTATGACAGGCATCA",1,5.18,6.14,-4.62,0.94,3,1.01,0,">1 nonsynonymous","C49M G86Q",2
"lib1","SARS-CoV-2","AGTATGACTCACTGAT",3,28.37,6,-4.76,2,1.5,1.35,0.08,">1 nonsynonymous","P7L Y50T L122M S129M A190C",5
"lib1","SARS-CoV-2","AGTATGACTCGGTGCT",4,1.01,NA,NA,NA,NA,NA,NA,"stop","G117D L131N P149L K198*",4
"lib1","SARS-CoV-2","AGTATGATCAGTAAAT",5,74.01,8.68,-2.08,0.15,1.5,1.12,0.01,">1 nonsynonymous","A105S Y165R",2
"lib1","SARS-CoV-2","AGTATGATTTGTCCAC",5,43.82,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L57A D112F K199I",3
"lib1","SARS-CoV-2","AGTATGCACGCATTGT",12,61.04,8.5,-2.26,0.29,1.5,1.15,0.04,">1 nonsynonymous","S45L V115Q G146S G152M V173W",5
"lib1","SARS-CoV-2","AGTATGCAGAATAGGC",2,5.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N24L D34P S43T T140F",4
"lib1","SARS-CoV-2","AGTATGCCACCCTGGG",2,99.18,10.97,0.2,0.06,2.94,1,0,">1 nonsynonymous","G9R Q163A V173K",3
"lib1","SARS-CoV-2","AGTATGCCTAGAAACT",10,133.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33L I72L G83V R124S T140S P149K",6
"lib1","SARS-CoV-2","AGTATGCGAACCCATA",6,122.17,10.72,-0.05,0.05,2.91,1.04,0,"1 nonsynonymous","Q84R",1
"lib1","SARS-CoV-2","AGTATGCTGTCTAACG",3,40.28,7.18,-3.58,0.46,1.5,1,0.07,">1 nonsynonymous","E10C F99Y A105L E141V A190V",5
"lib1","SARS-CoV-2","AGTATGCTTTCACTTA",3,11.27,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","G86V V103F",2
"lib1","SARS-CoV-2","AGTATGGATTGAAAAG",5,28.1,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","D98I D137Q",2
"lib1","SARS-CoV-2","AGTATGGCAATAGAAC",1,10.88,10.81,0.04,0.1,2.96,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGTATGGGCAGCATAG",2,19.5,10.53,-0.23,0.07,2.93,1.08,0,">1 nonsynonymous","V37W C61V N120K K128M",4
"lib1","SARS-CoV-2","AGTATGGTGCAGTATC",8,99.87,10.25,-0.51,0.03,2.88,1.05,0,">1 nonsynonymous","Y119R T201M",2
"lib1","SARS-CoV-2","AGTATGTAAATAATAC",2,1.15,NA,NA,NA,NA,NA,NA,"stop","T85E Y93* Y119S F156R",4
"lib1","SARS-CoV-2","AGTATGTAATTATCAT",2,13.46,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L5M A81H A105F G152L",4
"lib1","SARS-CoV-2","AGTATGTAATTCAAAG",3,30.52,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C61D G152D C158E G166K T201Q",5
"lib1","SARS-CoV-2","AGTATGTAGTATTATT",4,13.82,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L5R V11R Y35I P54E P96V N120W",6
"lib1","SARS-CoV-2","AGTATGTGCGACTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3Q R25P D98* G116W P161L",5
"lib1","SARS-CoV-2","AGTATGTGTTTCTGAT",3,35.82,6.1,-4.67,0.63,1.5,1.17,0.01,">1 nonsynonymous","C49L T55S V71Q N109F",4
"lib1","SARS-CoV-2","AGTATGTTATCCTGAA",5,33.57,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T55I A105T C150R",3
"lib1","SARS-CoV-2","AGTATGTTCAATTTAC",1,33.16,9.58,-1.18,0.13,2.18,1.05,0.01,">1 nonsynonymous","W106L F156A",2
"lib1","SARS-CoV-2","AGTATGTTCGAATACA",2,14.29,7.82,-2.95,0.2,1.87,1.14,0.02,">1 nonsynonymous","W23K F156S",2
"lib1","SARS-CoV-2","AGTATTAAAACAGACC",3,33.96,7.89,-2.87,0.34,1.79,1.25,0.04,">1 nonsynonymous","I2T Y159Q G166S",3
"lib1","SARS-CoV-2","AGTATTAAAGCACAAT",8,47.77,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","K94W N107S K128M",3
"lib1","SARS-CoV-2","AGTATTAAATATAAGG",3,32.56,10.69,-0.07,0.05,2.85,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTATTAAGACGTCCA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","S19L S41T N64* L95M G146V Q176L",6
"lib1","SARS-CoV-2","AGTATTAATAAGACGC",2,79.98,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N4R F70K",2
"lib1","SARS-CoV-2","AGTATTAATACAATTT",2,38.8,9.84,-0.93,0.11,2.38,1.03,0.01,"1 nonsynonymous","L38A",1
"lib1","SARS-CoV-2","AGTATTAATACCAAAA",3,55.69,10.3,-0.46,0.04,2.9,1.05,0,">1 nonsynonymous","R78L E154N A192P",3
"lib1","SARS-CoV-2","AGTATTACAAACGCCA",2,64.34,9.92,-0.85,0.12,2.07,1.08,0.01,">1 nonsynonymous","Y39T T63E A105I",3
"lib1","SARS-CoV-2","AGTATTACAATACTAA",2,8.01,9.18,-1.59,0.41,2.37,1.22,0.03,">1 nonsynonymous","P7I G155T",2
"lib1","SARS-CoV-2","AGTATTACAGTAATAA",9,29.21,9.14,-1.62,0.39,1.5,1,0.07,">1 nonsynonymous","A22V L38R",2
"lib1","SARS-CoV-2","AGTATTACGTGAACAC",3,45.61,8.74,-2.02,0.28,1.5,1.03,0.03,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","AGTATTACTTTTCGCG",2,11.69,10.16,-0.6,0.16,2.46,1,0.01,">1 nonsynonymous","D59A G116E G152H H189F",4
"lib1","SARS-CoV-2","AGTATTAGAACAAGAG",1,34.66,10.71,-0.05,0.1,2.87,1.03,0,">1 nonsynonymous","I104L E141S",2
"lib1","SARS-CoV-2","AGTATTAGATGGCGAC",3,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N A105D",2
"lib1","SARS-CoV-2","AGTATTAGGCATACCA",5,41.95,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F8S D59I A105E",3
"lib1","SARS-CoV-2","AGTATTATATACCGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G51L G83D A89* T201K",4
"lib1","SARS-CoV-2","AGTATTATCAAAAGAG",1,1.08,NA,NA,NA,NA,NA,NA,"stop","N1* K199T",2
"lib1","SARS-CoV-2","AGTATTATCTCACCAT",3,20.46,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","N64L F167S",2
"lib1","SARS-CoV-2","AGTATTATTGACAAAT",15,157.11,8.55,-2.21,0.06,2.65,1.08,0,">1 nonsynonymous","R73E K87F",2
"lib1","SARS-CoV-2","AGTATTCACATTTGTT",3,3.64,NA,NA,NA,NA,NA,NA,"stop","D68R D97* F160K",3
"lib1","SARS-CoV-2","AGTATTCACGTAGACA",4,53.81,9.49,-1.28,0.12,1.81,1.13,0,">1 nonsynonymous","F8Q P54V",2
"lib1","SARS-CoV-2","AGTATTCCATTTGTTT",1,42.65,9.98,-0.79,0.11,2.56,1,0.01,">1 nonsynonymous","V77M D90N S129C",3
"lib1","SARS-CoV-2","AGTATTCCCCGGTTAG",6,5.87,10.77,0.01,0.07,2.94,1,0,">1 nonsynonymous","G9V T55S",2
"lib1","SARS-CoV-2","AGTATTCGATGCGCGC",3,6.38,6,-4.76,1.84,1.5,1.16,0.03,">1 nonsynonymous","I88M L183P",2
"lib1","SARS-CoV-2","AGTATTCTCCTCCGGA",2,62.99,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5F V20S N40V",3
"lib1","SARS-CoV-2","AGTATTCTGGCTGAAC",1,3.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","AGTATTCTTCGAAATA",3,67.41,10.64,-0.13,0.06,2.83,1.1,0,">1 nonsynonymous","R16W N40R N110S T201G",4
"lib1","SARS-CoV-2","AGTATTCTTTGCCTCC",3,0.14,NA,NA,NA,NA,NA,NA,"stop","S41R I104N F134*",3
"lib1","SARS-CoV-2","AGTATTGAAGACAGTA",3,26.62,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F47G R127S D137P Q176P",4
"lib1","SARS-CoV-2","AGTATTGACATAGTGA",4,52.99,6,-4.76,1.77,1.5,1.13,0.01,">1 nonsynonymous","V37A A89D R136M F167G",4
"lib1","SARS-CoV-2","AGTATTGACCGCGTTG",2,15.09,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N40T P96W C102W Y119G",4
"lib1","SARS-CoV-2","AGTATTGCCCATACAG",1,29.33,10.78,0.01,0.11,2.78,1.05,0,">1 nonsynonymous","I2V S36I",2
"lib1","SARS-CoV-2","AGTATTGGACTGTAGA",7,1.74,NA,NA,NA,NA,NA,NA,"stop","P7Y Y119* C158N",3
"lib1","SARS-CoV-2","AGTATTGGCTATTTAA",14,259.55,8.35,-2.41,0.16,1.99,1.11,0.01,">1 nonsynonymous","Q84T N107A G166L",3
"lib1","SARS-CoV-2","AGTATTGGGTAATTAA",2,17.82,9.73,-1.03,0.09,2.29,1.06,0,">1 nonsynonymous","Y121L F134K",2
"lib1","SARS-CoV-2","AGTATTGTAATCCCAT",2,25.75,6,-4.76,1.66,1.5,1.26,0.03,">1 nonsynonymous","K56M P82A Y119S I142C T201I",5
"lib1","SARS-CoV-2","AGTATTGTATAGAATC",4,12.72,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","A81G P96W G172P",3
"lib1","SARS-CoV-2","AGTATTGTTACATAAT",1,29.73,9.11,-1.66,0.12,2.65,1.17,0,">1 nonsynonymous","Y35R S129R F156M",3
"lib1","SARS-CoV-2","AGTATTTAACGAAATT",1,45.12,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V20L D34R I88R Y121I R136P",5
"lib1","SARS-CoV-2","AGTATTTCGAGGCAGA",1,52.51,10.76,-0.01,0.07,2.87,1.06,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","AGTATTTCTGGAATTT",12,69.54,9.29,-1.47,0.21,1.76,1.13,0.02,">1 nonsynonymous","T15N F134A Q144R",3
"lib1","SARS-CoV-2","AGTATTTTACCTTAAA",6,65.13,10.11,-0.66,0.09,2.76,1.06,0,">1 nonsynonymous","N4L N58M",2
"lib1","SARS-CoV-2","AGTCAAAACTTGATAT",3,12.08,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V20M R27F G51S D68E",4
"lib1","SARS-CoV-2","AGTCAAAATTCGAAAC",5,79.81,10.22,-0.54,0.03,2.9,1.04,0,">1 nonsynonymous","N30H G174T",2
"lib1","SARS-CoV-2","AGTCAAACAAAGCAAG",2,35.4,10.31,-0.45,0.08,2.91,1.04,0,">1 nonsynonymous","A33E T55E P197D",3
"lib1","SARS-CoV-2","AGTCAAACAATACTAT",14,118.52,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L38R K56P T170L F185L",4
"lib1","SARS-CoV-2","AGTCAAACACTCCCGT",6,105.69,9.85,-0.91,0.09,2.25,1.05,0,">1 nonsynonymous","K94Y V153S",2
"lib1","SARS-CoV-2","AGTCAAACAGTTAAAA",3,30.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89F L162Y",2
"lib1","SARS-CoV-2","AGTCAAACCATTTCCG",1,76.52,8.55,-2.21,0.22,1.5,1.05,0.02,">1 nonsynonymous","Y91S K128D L162V",3
"lib1","SARS-CoV-2","AGTCAAACTACAGGGG",8,71.71,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","R16T F44G N107P Y143K",4
"lib1","SARS-CoV-2","AGTCAAATAAGGCGAA",3,107.57,10.14,-0.62,0.06,2.8,1.01,0,">1 nonsynonymous","G83N Y165F",2
"lib1","SARS-CoV-2","AGTCAAATATCGAAAC",5,77.01,10.17,-0.59,0.06,2.49,1.03,0,">1 nonsynonymous","V65Q V173F",2
"lib1","SARS-CoV-2","AGTCAAATATTTATCA",7,72.61,9.95,-0.81,0.11,2.09,1.09,0,">1 nonsynonymous","I80L D98V",2
"lib1","SARS-CoV-2","AGTCAACAAAACAACA",1,17.43,10.41,-0.35,0.11,2.63,1.07,0.01,"1 nonsynonymous","G116I",1
"lib1","SARS-CoV-2","AGTCAACAAAACTAAG",1,33.19,10.89,0.12,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTCAACAAGTTGTCT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","L5* F126Y",2
"lib1","SARS-CoV-2","AGTCAACACCGTATCC",2,13.04,6,-4.76,0.97,2.57,1.12,0.01,">1 nonsynonymous","A42V K56L G74R I88Q D112G S164A",6
"lib1","SARS-CoV-2","AGTCAACACGTTTCTT",7,72.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P7T D34T F62I T85N I88Y N120S",6
"lib1","SARS-CoV-2","AGTCAACATCCGAGTG",1,31.48,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I2S V11F C31T T55P R73I L95N K199R",7
"lib1","SARS-CoV-2","AGTCAACCTGAATTGC",6,104.05,8.73,-2.03,0.09,2.77,1.12,0,">1 nonsynonymous","N64L G117H",2
"lib1","SARS-CoV-2","AGTCAACGACATCGTT",2,11.32,10.75,-0.02,0.22,2.68,1.16,0.02,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","AGTCAACTAACATCCA",14,59.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V103P F134Q I142S",3
"lib1","SARS-CoV-2","AGTCAAGCACATTACG",1,27.97,10.84,0.07,0.08,2.92,1.06,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","AGTCAAGCGACTTCCA",1,50.49,10.75,-0.01,0.11,2.93,1.03,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","AGTCAAGGATTCGAAG",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77F Y91L C102Q Y159F",4
"lib1","SARS-CoV-2","AGTCAAGGATTCTTAA",5,63.93,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N120S Y143V Y165A S200F",4
"lib1","SARS-CoV-2","AGTCAAGTATCCATGC",2,57.52,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","I2Q N110L Y119R N157Y Y165C Y175V T201R",7
"lib1","SARS-CoV-2","AGTCAAGTTAACTCAG",2,35.39,8.93,-1.84,0.18,1.9,1.17,0.01,">1 nonsynonymous","T3C C61T Y121S",3
"lib1","SARS-CoV-2","AGTCAATGCTGAAAAT",3,40.84,10.72,-0.04,0.05,2.94,1.04,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","AGTCAATGGGTCCGTG",2,43.48,8.91,-1.86,0.07,2.87,1.09,0,">1 nonsynonymous","Y119K F156L",2
"lib1","SARS-CoV-2","AGTCAATTCTACTACA",2,1.13,NA,NA,NA,NA,NA,NA,"stop","R25F D59M K94L P191N K198*",5
"lib1","SARS-CoV-2","AGTCAATTGAAGCACC",3,1.32,NA,NA,NA,NA,NA,NA,"stop","I2V F99Y A105* P149H P161S",5
"lib1","SARS-CoV-2","AGTCAATTTAACAAAG",13,253.65,10.44,-0.32,0.04,2.91,1.03,0,">1 nonsynonymous","G9Y C61R E135G",3
"lib1","SARS-CoV-2","AGTCAATTTATTTCAA",1,54.96,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G51P N58M N157A Q176T T201Q",5
"lib1","SARS-CoV-2","AGTCACAAACCTTGCA",2,28.24,10.76,0,0.06,2.86,1.07,0,">1 nonsynonymous","R16T N58H",2
"lib1","SARS-CoV-2","AGTCACAATACATAAG",2,24.77,8.28,-2.49,0.19,1.51,1.05,0.02,">1 nonsynonymous","Y121S S129R F134S",3
"lib1","SARS-CoV-2","AGTCACACCTTCTCAA",3,30.89,6,-4.76,1.4,1.5,1.16,0.01,">1 nonsynonymous","F99N F134C",2
"lib1","SARS-CoV-2","AGTCACACGTAGCATA",6,4.16,NA,NA,NA,NA,NA,NA,"stop","T15* I72D G83V Y91C P133L C150G",6
"lib1","SARS-CoV-2","AGTCACAGCAATTTCT",4,23.75,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T3M Y35V A89L",3
"lib1","SARS-CoV-2","AGTCACAGTCTAATTA",1,31.6,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K56N G86R R136L",3
"lib1","SARS-CoV-2","AGTCACCCCTTTCGCC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","L5S A42I T63A T100R K199*",5
"lib1","SARS-CoV-2","AGTCACGACATCGAAG",13,2.79,NA,NA,NA,NA,NA,NA,"stop","G86R G117* S184K",3
"lib1","SARS-CoV-2","AGTCACGCAGGAAGAA",4,21.66,6,-4.76,1.22,1.76,1.16,0.01,">1 nonsynonymous","F44I D90F N120W V181C",4
"lib1","SARS-CoV-2","AGTCACGTCAAAACCT",3,29.84,8.55,-2.22,0.1,3,1.08,0,">1 nonsynonymous","K26V T55D T85R Y121L N157A",5
"lib1","SARS-CoV-2","AGTCACTAGGGTCTGG",6,116.64,10.47,-0.29,0.03,2.9,1.02,0,"1 nonsynonymous","S45G",1
"lib1","SARS-CoV-2","AGTCACTGAGTTCAAA",15,98.64,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G74F A89L V103L L122G T170Q V173P",6
"lib1","SARS-CoV-2","AGTCACTGATTGAGAC",3,19.67,9.7,-1.06,0.11,2.83,1.12,0,">1 nonsynonymous","Y119T Q168S",2
"lib1","SARS-CoV-2","AGTCAGAACAACCACG",7,72.81,10.65,-0.12,0.09,2.86,1.13,0,">1 nonsynonymous","I2K V37L",2
"lib1","SARS-CoV-2","AGTCAGAACTATAAAT",4,24.05,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S19L S36L C49M V103R",4
"lib1","SARS-CoV-2","AGTCAGACAAACAAGT",2,14.04,6.09,-4.67,0.43,3,1.24,0.01,">1 nonsynonymous","F62I G86R S113W G146L",4
"lib1","SARS-CoV-2","AGTCAGACAGATAAAT",1,7.3,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V103Y D112R K132V G172A",4
"lib1","SARS-CoV-2","AGTCAGACTTCCTATA",3,19.12,6.98,-3.78,0.32,1.5,1.14,0.02,">1 nonsynonymous","C61Q P82Q Y119T",3
"lib1","SARS-CoV-2","AGTCAGAGGGGGTCAA",6,68.89,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G83S R124H",2
"lib1","SARS-CoV-2","AGTCAGAGTTGAAAAC",3,62.86,10.21,-0.55,0.08,2.76,1.04,0,">1 nonsynonymous","L5R Y39S S53L A67I",4
"lib1","SARS-CoV-2","AGTCAGATATCGACAC",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A G51A L122K E141Q",4
"lib1","SARS-CoV-2","AGTCAGATTAAAAACG",5,42.08,7.54,-3.23,0.27,1.5,1.14,0.02,">1 nonsynonymous","L38S Q84F S147T G174L",4
"lib1","SARS-CoV-2","AGTCAGCACCATGTTA",2,11.62,10.42,-0.35,0.13,2.95,1.02,0.01,">1 nonsynonymous","G116A P169R",2
"lib1","SARS-CoV-2","AGTCAGCATGTCCCCC",2,80.17,9.68,-1.08,0.13,1.79,1.13,0.01,">1 nonsynonymous","G51T A81R",2
"lib1","SARS-CoV-2","AGTCAGCCTAATGGAT",5,26.79,10.85,0.08,0.15,2.73,1.06,0.01,"1 nonsynonymous","R16I",1
"lib1","SARS-CoV-2","AGTCAGCGATCCTAAG",1,6.59,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","C6Y T46I P82G A89V T100E S184L A190D",7
"lib1","SARS-CoV-2","AGTCAGCGGATGAGCG",4,14.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L V37I C49F D98S G152N G174L",6
"lib1","SARS-CoV-2","AGTCAGGGACATGTCT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","AGTCAGTCAGATACTA",1,33.52,8.95,-1.82,0.24,1.5,1.19,0.03,">1 nonsynonymous","C6F Y35L D98G Y178S",4
"lib1","SARS-CoV-2","AGTCATAAAACGATCT",2,26.16,6,-4.76,1.67,1.5,1.19,0.01,">1 nonsynonymous","Y39G K48L V103S C158Y F167Y R179H",6
"lib1","SARS-CoV-2","AGTCATAAGTATTAGA",2,19.64,9.58,-1.18,0.16,2.13,1,0.01,">1 nonsynonymous","F8M Q79T",2
"lib1","SARS-CoV-2","AGTCATACCCAGTGAA",8,66.02,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","V103F N107R N120S R179I",4
"lib1","SARS-CoV-2","AGTCATACGGAGCCTT",7,129.83,9.92,-0.84,0.1,2.5,1.06,0,">1 nonsynonymous","G152A P161A",2
"lib1","SARS-CoV-2","AGTCATACGTAAATCG",11,88.68,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A81I I138L G146A G152C",4
"lib1","SARS-CoV-2","AGTCATATACGCAACA",2,23.29,9.19,-1.58,0.21,1.75,1.17,0.02,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","AGTCATATTAGGTTTC",17,240.86,10.6,-0.16,0.04,2.89,1.04,0,">1 nonsynonymous","V65L K128I I138V K198V",4
"lib1","SARS-CoV-2","AGTCATCACTACACCC",4,570.5,10.73,-0.04,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCATCAGCAAACCA",6,91.89,10.1,-0.66,0.06,2.77,1.05,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","AGTCATCATGCAGAAA",3,57.73,10.51,-0.25,0.07,2.84,1.08,0,">1 nonsynonymous","I2D R27L S36W",3
"lib1","SARS-CoV-2","AGTCATCTAACCAGAT",7,75.19,9.82,-0.94,0.07,2.74,1.09,0,">1 nonsynonymous","T85G Y119F",2
"lib1","SARS-CoV-2","AGTCATCTAATACACT",3,16.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y39S I80T K94H F99P",4
"lib1","SARS-CoV-2","AGTCATCTGAACAATT",6,0.39,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","AGTCATGAGATACTAA",3,17.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12H K26P C61N",3
"lib1","SARS-CoV-2","AGTCATGATACTGTCA",8,24.78,7.73,-3.03,0.36,1.5,1.08,0.07,">1 nonsynonymous","R16I R136H V182F",3
"lib1","SARS-CoV-2","AGTCATGCAACCGCGA",4,148.54,10.14,-0.63,0.09,2.06,1.02,0,">1 nonsynonymous","G51I K198Q",2
"lib1","SARS-CoV-2","AGTCATGCCTATCCAA",2,21.89,7.81,-2.95,0.19,2.02,1.14,0.01,"1 nonsynonymous","C158N",1
"lib1","SARS-CoV-2","AGTCATGGAAAAGTTA",5,114.52,10.79,0.02,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCATGTCGCTTTAG",2,54.7,10.77,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","P7D",1
"lib1","SARS-CoV-2","AGTCATTAAAATATTT",5,28.05,6.04,-4.72,0.81,1.5,1.15,0.01,">1 nonsynonymous","L57N L95V D112S R124G P149A",5
"lib1","SARS-CoV-2","AGTCATTAATTTATGT",6,46.69,9.98,-0.78,0.2,1.93,1.04,0.02,">1 nonsynonymous","V77R G155R",2
"lib1","SARS-CoV-2","AGTCATTATAAGTTTA",2,45.45,6.15,-4.62,0.84,1.5,1.16,0.02,">1 nonsynonymous","R25K D90S I138R V194P",4
"lib1","SARS-CoV-2","AGTCATTCATAAGCCA",7,63.67,9.8,-0.97,0.08,2.31,1.05,0,">1 nonsynonymous","N13K T55C L122C",3
"lib1","SARS-CoV-2","AGTCATTGCAACACCA",5,18.07,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5V K56V R124H E154L",4
"lib1","SARS-CoV-2","AGTCATTGCTATTCAT",3,8.12,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","AGTCATTTCCCTTTTT",14,376.14,9.92,-0.85,0.06,2.46,1.04,0,">1 nonsynonymous","C6I F47V C61R",3
"lib1","SARS-CoV-2","AGTCCAAAAGTATGCG",2,0.23,NA,NA,NA,NA,NA,NA,"stop","N13F V32M F70* D90T L131S P149N G174F",7
"lib1","SARS-CoV-2","AGTCCAAACGTGTGGC",1,43.13,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I2R Y39S G86R D97L",4
"lib1","SARS-CoV-2","AGTCCAACACTTTTAG",2,62.87,10.87,0.11,0.05,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCCAACTACACTTT",2,66.13,10.59,-0.17,0.06,2.84,1.11,0,">1 nonsynonymous","S41C I72L N130V",3
"lib1","SARS-CoV-2","AGTCCAACTCCGTAAA",5,81.03,10.35,-0.42,0.03,2.83,1.06,0,"1 nonsynonymous","I104T",1
"lib1","SARS-CoV-2","AGTCCAATAAAACCTA",2,39.56,10.78,0.02,0.05,2.92,1.05,0,">1 nonsynonymous","L125I L188V",2
"lib1","SARS-CoV-2","AGTCCAATGTAAGCCT",5,71.77,10.31,-0.46,0.09,2.77,1.05,0,">1 nonsynonymous","L5F L60Q F126L P149L",4
"lib1","SARS-CoV-2","AGTCCACATGATGAGA",2,84.09,6.95,-3.82,0.18,1.57,1.13,0.01,">1 nonsynonymous","I28W L122W G146M G155L",4
"lib1","SARS-CoV-2","AGTCCACCCACAGCCA",2,43.62,8.17,-2.59,0.14,2.31,1.07,0.01,">1 nonsynonymous","D59V S113N",2
"lib1","SARS-CoV-2","AGTCCACCTCTTCCCG",2,6.47,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","W23R Y35T V52L K94F",4
"lib1","SARS-CoV-2","AGTCCACTACGGCTAA",4,25.59,6,-4.76,2,1.5,1.13,0.08,">1 nonsynonymous","F62N D112T Y165L",3
"lib1","SARS-CoV-2","AGTCCAGAAGACCAGG",2,32.02,10.8,0.04,0.09,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCCAGACCACTATG",3,88.92,10.6,-0.17,0.05,2.87,1.09,0,"1 nonsynonymous","I80V",1
"lib1","SARS-CoV-2","AGTCCAGATAGAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9K A33R T55C V103S S113*",5
"lib1","SARS-CoV-2","AGTCCAGGACCCACCT",8,141.62,10.45,-0.32,0.06,2.65,1.08,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","AGTCCAGTAAAATGCG",2,40.58,9.6,-1.17,0.08,2.68,1.05,0,">1 nonsynonymous","K87T E154I",2
"lib1","SARS-CoV-2","AGTCCATAAAGCAAAA",1,19.81,10.19,-0.58,0.17,2.29,1,0.01,">1 nonsynonymous","L5F N13T Y35S T55S T201K",5
"lib1","SARS-CoV-2","AGTCCATACGCACCGC",1,20.37,6.28,-4.49,0.22,2.52,1.05,0,">1 nonsynonymous","A14V P54M P96L",3
"lib1","SARS-CoV-2","AGTCCATATGGTACCT",7,43.93,8.73,-2.03,0.21,1.5,1.05,0.02,">1 nonsynonymous","V11Y G83V E141N",3
"lib1","SARS-CoV-2","AGTCCATCATAACTCC",3,0.42,NA,NA,NA,NA,NA,NA,"stop","N58* L125S",2
"lib1","SARS-CoV-2","AGTCCATCCAGAGAAG",3,19.11,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","I28M N64Q L95R D137Y",4
"lib1","SARS-CoV-2","AGTCCATGCTAGATAC",9,151.15,10.74,-0.02,0.05,2.92,1.06,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","AGTCCATTCATACAGT",2,28.43,10.78,0.01,0.06,2.85,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCCCACCTTAACCT",10,70.55,10.72,-0.04,0.03,2.91,1.04,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","AGTCCCACGTGTTGGC",3,50.6,10.74,-0.03,0.09,2.85,1.11,0,"1 nonsynonymous","F160A",1
"lib1","SARS-CoV-2","AGTCCCAGTAGTGCGG",1,7.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15W R27T E76K F156L",4
"lib1","SARS-CoV-2","AGTCCCATCGCAAAGT",1,15,9.99,-0.78,0.08,2.07,1,0,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","AGTCCCATGAATATTA",2,55.62,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","S19W L38P T55N A89V T201S",5
"lib1","SARS-CoV-2","AGTCCCCCGCGAGGAC",1,6.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44A D90K L95T Y119V E186G",5
"lib1","SARS-CoV-2","AGTCCCCTCGCGTCCG",5,94.53,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I2S G117F Q176S",3
"lib1","SARS-CoV-2","AGTCCCGATGTTCATA",5,28.43,6,-4.76,1.18,1.5,1.16,0.02,">1 nonsynonymous","G86W F126W S184Q",3
"lib1","SARS-CoV-2","AGTCCCGCACGTCTAA",15,2.94,NA,NA,NA,NA,NA,NA,"stop","G9V C31Q K48* T63D D90V F156L F167T",7
"lib1","SARS-CoV-2","AGTCCCGGAGGTCATT",3,25.13,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F44P D98R R124F",3
"lib1","SARS-CoV-2","AGTCCCGGCATCTGTA",3,19.75,6.6,-4.17,0.45,1.5,1.13,0.04,">1 nonsynonymous","S41V C102Y",2
"lib1","SARS-CoV-2","AGTCCCGTTTCGCCGG",7,64.95,10.65,-0.11,0.06,2.93,1.04,0,">1 nonsynonymous","T55N V77I",2
"lib1","SARS-CoV-2","AGTCCCTCAAATACAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","AGTCCCTTAATACTAC",7,92.86,10.54,-0.22,0.04,2.92,1,0,">1 nonsynonymous","Y123W P149K",2
"lib1","SARS-CoV-2","AGTCCGACCCCAAGCA",4,15.83,7.1,-3.67,0.31,1.62,1.06,0.04,">1 nonsynonymous","F8A T46N Q84R D90K L122G",5
"lib1","SARS-CoV-2","AGTCCGATACAGGGGG",2,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T I88T V173P K198P",4
"lib1","SARS-CoV-2","AGTCCGCAGCGGTGGC",4,12.2,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A105F P133C",2
"lib1","SARS-CoV-2","AGTCCGGCGTCCCAAT",3,28.26,8.78,-1.98,0.26,1.5,1.29,0.03,">1 nonsynonymous","E10S S29Y G83S A89T T170Q",5
"lib1","SARS-CoV-2","AGTCCGGGTTATTTGC",8,54.76,6,-4.76,1.08,1.5,1.14,0.01,">1 nonsynonymous","I72S K87V G116Y K128M R136H V173F",6
"lib1","SARS-CoV-2","AGTCCGGTGAGATGAA",3,30.4,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","T3I F62R Y93T Y121S",4
"lib1","SARS-CoV-2","AGTCCGGTGCAAAAGA",1,25.82,8.85,-1.92,0.27,2.62,1.2,0.03,"1 nonsynonymous","S113Y",1
"lib1","SARS-CoV-2","AGTCCGTTATAGCCAA",5,88.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F62S Q79H F99V A105C P149L P191N",6
"lib1","SARS-CoV-2","AGTCCTACTCTTGCTA",1,36.85,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F99G L125K",2
"lib1","SARS-CoV-2","AGTCCTATCTGGCCAA",2,20.52,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","P7T K94N N151S F167W",4
"lib1","SARS-CoV-2","AGTCCTATGTACCTTT",8,169.78,9.19,-1.58,0.06,2.82,1.1,0,">1 nonsynonymous","T55P G117N",2
"lib1","SARS-CoV-2","AGTCCTCATCTGAACT",4,20.9,6.64,-4.13,0.57,1.5,1.07,0.03,">1 nonsynonymous","I88S Y159P",2
"lib1","SARS-CoV-2","AGTCCTTACTGGTTGC",6,67.85,6.1,-4.66,0.76,1.5,1.19,0.02,">1 nonsynonymous","C61W N157D G172R T201I",4
"lib1","SARS-CoV-2","AGTCCTTGCGCTGAAC",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18K S45P I88V D98K K128Y",5
"lib1","SARS-CoV-2","AGTCCTTTATACCGTA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","F47I C102G K114*",3
"lib1","SARS-CoV-2","AGTCGAAAAAAACCCC",3,24.66,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F17R A89H Q176V",3
"lib1","SARS-CoV-2","AGTCGAAAAAAGGGAT",5,2.44,NA,NA,NA,NA,NA,NA,"stop","V37F P96* N120R S129G",4
"lib1","SARS-CoV-2","AGTCGAAGATAGGATT",6,63.03,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V32E F70H",2
"lib1","SARS-CoV-2","AGTCGAAGGGACTAGG",3,18.05,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","C6W G86Y C158L",3
"lib1","SARS-CoV-2","AGTCGAAGTGTATTGT",4,111.4,10.73,-0.03,0.07,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCGAATGTAAATAA",2,19.85,9.88,-0.88,0.12,2.61,1,0,">1 nonsynonymous","C6F S36Q K56S Q168R",4
"lib1","SARS-CoV-2","AGTCGAATGTCGGACC",5,82.74,10.21,-0.56,0.05,2.89,1.01,0,">1 nonsynonymous","N130L R136L",2
"lib1","SARS-CoV-2","AGTCGAATTTAGTTAA",3,10.06,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5P G51S I104S L122V P133V",5
"lib1","SARS-CoV-2","AGTCGACAATATGTCA",1,23.83,10.71,-0.05,0.09,2.87,1.07,0.01,"synonymous","",0
"lib1","SARS-CoV-2","AGTCGACAGTAGTCTG",5,16.16,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V103H Y143V",2
"lib1","SARS-CoV-2","AGTCGAGTTCACAAAA",1,7.73,10.46,-0.3,0.15,3,1,0.01,">1 nonsynonymous","A42L C61K",2
"lib1","SARS-CoV-2","AGTCGATACTCAAACA",1,6.7,6.03,-4.74,2,3,1.32,0.01,">1 nonsynonymous","S19W V153G",2
"lib1","SARS-CoV-2","AGTCGATTTTCAACTA",3,49.35,10.2,-0.57,0.08,2.84,1.03,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","AGTCGATTTTTCGTTA",2,51.06,8.8,-1.96,0.14,1.81,1.11,0.01,">1 nonsynonymous","L57V D90E G152T",3
"lib1","SARS-CoV-2","AGTCGCAACTCCACAT",3,32.33,10.81,0.05,0.09,2.99,1.01,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","AGTCGCAAGAATAAAA",2,23.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G83L P96W F99C G174R",4
"lib1","SARS-CoV-2","AGTCGCATAACGGAGC",2,16.89,10.73,-0.03,0.05,2.95,1.01,0,">1 nonsynonymous","P54L S129C",2
"lib1","SARS-CoV-2","AGTCGCCAAAAAAATA",2,49.47,9.78,-0.99,0.1,1.96,1.07,0,">1 nonsynonymous","N58V Y165F",2
"lib1","SARS-CoV-2","AGTCGCCAAGTAAATA",2,21.14,10.5,-0.26,0.07,2.85,1.05,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","AGTCGCCATGAGTGTG",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25P P133H P161A",3
"lib1","SARS-CoV-2","AGTCGCGATTGCAATC",6,28.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I P96F L122F",3
"lib1","SARS-CoV-2","AGTCGCGCTTAGCTCC",2,35.93,10.91,0.15,0.09,2.87,1.08,0,"1 nonsynonymous","S43E",1
"lib1","SARS-CoV-2","AGTCGCTATCATGAAG",4,39.7,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14L V37E E141H N157F",4
"lib1","SARS-CoV-2","AGTCGCTCCTAAGTGG",1,0.26,NA,NA,NA,NA,NA,NA,"stop","L38I V52E I104*",3
"lib1","SARS-CoV-2","AGTCGCTCGATCCCCT",3,1.06,NA,NA,NA,NA,NA,NA,"stop","T63F K94S A145L K199*",4
"lib1","SARS-CoV-2","AGTCGGAACGCTGCGT",9,2.65,NA,NA,NA,NA,NA,NA,"stop","C6Y K48E N107L T201*",4
"lib1","SARS-CoV-2","AGTCGGACCTAATTAC",11,50.35,9.08,-1.69,0.23,1.54,1.12,0.02,">1 nonsynonymous","W106G V173W",2
"lib1","SARS-CoV-2","AGTCGGATCAAACCCG",2,20.51,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","D68A V103L R179Y S200L",4
"lib1","SARS-CoV-2","AGTCGGCTAACTGATC",2,16.03,9.92,-0.85,0.16,1.79,1.16,0.01,">1 nonsynonymous","N1D S29M A81T",3
"lib1","SARS-CoV-2","AGTCGGGAGTAACTCC",2,73.61,8.69,-2.08,0.07,2.89,1.04,0,">1 nonsynonymous","S43L Y50F F126R",3
"lib1","SARS-CoV-2","AGTCGGGCAAAGACCA",1,148.18,10.47,-0.29,0.04,2.93,1,0,">1 nonsynonymous","S41K N64T L122K Q176M",4
"lib1","SARS-CoV-2","AGTCGGGCTTAGTCAG",1,89.16,8.39,-2.38,0.13,2.62,1.13,0.01,">1 nonsynonymous","D59R Y175S T201M",3
"lib1","SARS-CoV-2","AGTCGTACAATATCGA",1,57.17,10,-0.77,0.07,2.36,1.03,0,">1 nonsynonymous","Y50T Q84M S200A",3
"lib1","SARS-CoV-2","AGTCGTACCCTCCCTG",2,7.02,7.34,-3.43,0.57,1.52,1.4,0.07,">1 nonsynonymous","T3Q S41Y N58F G74Y",4
"lib1","SARS-CoV-2","AGTCGTACTATACGAT",5,121.66,8.55,-2.21,0.14,2.17,1.15,0.01,">1 nonsynonymous","E10N Y39S G146R",3
"lib1","SARS-CoV-2","AGTCGTATCAGGCAAT",10,102.08,6,-4.76,1.13,1.5,1.13,0.01,">1 nonsynonymous","Y119C I142M Y165D",3
"lib1","SARS-CoV-2","AGTCGTATCGCCACCG",2,80.28,9.35,-1.42,0.08,2.72,1.09,0,">1 nonsynonymous","L125S G155D",2
"lib1","SARS-CoV-2","AGTCGTATTCCGAACG",16,144.9,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","P7A D97M V103C",3
"lib1","SARS-CoV-2","AGTCGTCCAAGAACTT",4,86.15,7.44,-3.33,0.15,1.65,1.12,0.01,">1 nonsynonymous","A33H Q84H Y175Q",3
"lib1","SARS-CoV-2","AGTCGTCCTCACAGGG",10,81.62,10.09,-0.67,0.06,2.63,1.1,0,">1 nonsynonymous","F44Q S139K",2
"lib1","SARS-CoV-2","AGTCGTTACCACAACA",8,103.44,10.77,0.01,0.06,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCGTTGAAGTATTC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","D34N F44W F62* S129P Q144N T201K",6
"lib1","SARS-CoV-2","AGTCGTTTATATACAG",2,51.61,9.89,-0.88,0.13,2.19,1.1,0.01,">1 nonsynonymous","R127A P191I",2
"lib1","SARS-CoV-2","AGTCGTTTCCATAGAG",6,15.56,6,-4.76,1.36,1.5,1.11,0.01,">1 nonsynonymous","C6H G116S R124S",3
"lib1","SARS-CoV-2","AGTCTAAAAGATTGGA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","L57D R73Q D97Q N107L Y119* P161S Q176L",7
"lib1","SARS-CoV-2","AGTCTAAAAGTTCCAC",2,93.65,10.67,-0.09,0.04,2.91,1.06,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","AGTCTAAAATGAAGGG",3,11.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3H T55N V173G R179A",4
"lib1","SARS-CoV-2","AGTCTAAACCGTTTAT",3,19.8,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","S41R V52S A105E",3
"lib1","SARS-CoV-2","AGTCTAAAGAATTAAG",1,12.28,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","I104A D137L",2
"lib1","SARS-CoV-2","AGTCTAAAGAGAAACT",3,29.3,8.98,-1.78,0.13,2.89,1.12,0.01,">1 nonsynonymous","C61N N109E",2
"lib1","SARS-CoV-2","AGTCTAAATACCCAGA",5,43.5,10.72,-0.04,0.07,2.83,1.09,0,">1 nonsynonymous","K56Y V173K",2
"lib1","SARS-CoV-2","AGTCTAACAATAAAAA",1,50.48,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C31R C150W",2
"lib1","SARS-CoV-2","AGTCTAAGAACACACA",5,13.58,10,-0.76,0.17,1.91,1.07,0.01,">1 nonsynonymous","A42S L60S E135F",3
"lib1","SARS-CoV-2","AGTCTAAGATAATATT",2,0.73,NA,NA,NA,NA,NA,NA,"stop","T63R F70H G101S V173K H189*",5
"lib1","SARS-CoV-2","AGTCTAAGCCATGCAA",5,7.54,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","AGTCTAAGTGCCAAGA",2,6.78,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y93C A192G",2
"lib1","SARS-CoV-2","AGTCTAATAATAACAA",5,83.33,9.62,-1.15,0.14,1.91,1.18,0.01,">1 nonsynonymous","S45V E141G N151T",3
"lib1","SARS-CoV-2","AGTCTAATACAGTAAT",3,41.72,6.97,-3.79,0.26,1.5,1.19,0.02,">1 nonsynonymous","P149Y V181F",2
"lib1","SARS-CoV-2","AGTCTAATGAGTTCAC",1,29.82,6.61,-4.15,0.42,1.5,1.1,0.01,">1 nonsynonymous","T46W V115K C158R",3
"lib1","SARS-CoV-2","AGTCTAATGTCAACGC",3,99.94,10.55,-0.21,0.05,2.9,1.06,0,">1 nonsynonymous","A42L V77I",2
"lib1","SARS-CoV-2","AGTCTAATTAAGCTAA",2,22.93,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S19E P82G D90H L95K G101D E141F",6
"lib1","SARS-CoV-2","AGTCTAATTAGTGTTA",2,14.25,6,-4.76,2,3,1.07,0,">1 nonsynonymous","V37M N64E L95N G166I",4
"lib1","SARS-CoV-2","AGTCTACAATCATAGT",2,88.63,9.65,-1.12,0.11,1.92,1.1,0.01,">1 nonsynonymous","Y91G S108A L122W",3
"lib1","SARS-CoV-2","AGTCTACACTTAGAAA",1,0.45,NA,NA,NA,NA,NA,NA,"stop","C31S N151Q G174*",3
"lib1","SARS-CoV-2","AGTCTACATTTGACAG",5,64.52,10.4,-0.37,0.08,2.81,1.06,0,">1 nonsynonymous","W106C P149K P197I",3
"lib1","SARS-CoV-2","AGTCTACCAACATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","G51F P82I Y121* S129F F167V",5
"lib1","SARS-CoV-2","AGTCTACCTATTAAGT",6,50.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14L Q144T P149Y C158F",4
"lib1","SARS-CoV-2","AGTCTACTTTAGGCGG",5,40.52,10.71,-0.06,0.03,2.97,1,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","AGTCTAGAAATATAAT",5,0.26,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib1","SARS-CoV-2","AGTCTAGACATGACAT",3,28.15,10.1,-0.67,0.24,1.61,1.06,0.03,">1 nonsynonymous","G83Y A105C P133A",3
"lib1","SARS-CoV-2","AGTCTAGCATCAAAAT",18,108.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D68E A89D T201A",3
"lib1","SARS-CoV-2","AGTCTAGCATTACAAA",2,1.76,NA,NA,NA,NA,NA,NA,"stop","N13* T100P N120S",3
"lib1","SARS-CoV-2","AGTCTAGCTTGTACGC",8,140.72,10.55,-0.21,0.05,2.9,1.04,0,">1 nonsynonymous","G9Q A14R",2
"lib1","SARS-CoV-2","AGTCTATAATTTTGTT",3,77.84,10.79,0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCTATATCATCTAT",2,27.08,10.86,0.1,0.11,2.89,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTCTATCAATATAGC",3,27.64,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","E76D L122T F134P S200L",4
"lib1","SARS-CoV-2","AGTCTATCGACTTAAC",1,17.74,10.72,-0.05,0.09,2.81,1.03,0,">1 nonsynonymous","W23F E141D T201L",3
"lib1","SARS-CoV-2","AGTCTATTAAGACGGA",2,24.97,10.85,0.08,0.1,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTCTCAACTGTTCAA",2,22.35,10.77,0,0.09,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCTCAAGAACCATA",2,38.78,10.53,-0.23,0.07,2.87,1.06,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","AGTCTCAATATCGCTA",4,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120C",1
"lib1","SARS-CoV-2","AGTCTCACAGGTTTAG",3,2.44,NA,NA,NA,NA,NA,NA,"stop","T15N S43R F70* Q84L T201S",5
"lib1","SARS-CoV-2","AGTCTCACTCGAAATT",9,7.11,NA,NA,NA,NA,NA,NA,"stop","F99Y E141I P149C F160*",4
"lib1","SARS-CoV-2","AGTCTCACTGCTCTGG",7,96.01,8.11,-2.66,0.24,1.5,1.09,0.02,">1 nonsynonymous","F44R R73M N120L E141S",4
"lib1","SARS-CoV-2","AGTCTCAGACATCTAG",2,22.17,9.6,-1.16,0.18,1.81,1.11,0.01,">1 nonsynonymous","C61S R124K F160K",3
"lib1","SARS-CoV-2","AGTCTCAGTACATAAT",7,5.94,NA,NA,NA,NA,NA,NA,"stop","T3S A22L F99* F134K K198S",5
"lib1","SARS-CoV-2","AGTCTCATAATACACT",3,16.11,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","I72S P82V K87G",3
"lib1","SARS-CoV-2","AGTCTCCAAGGAAAAA",3,68.56,8.44,-2.33,0.13,1.88,1.11,0.01,">1 nonsynonymous","F62N Y91W N120V",3
"lib1","SARS-CoV-2","AGTCTCCATTTTACAA",7,125.08,10.23,-0.53,0.05,2.79,1.04,0,">1 nonsynonymous","T46N C61G S200N",3
"lib1","SARS-CoV-2","AGTCTCGGGCCAAAAG",2,30.06,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","T15S F44D D98Y S113F",4
"lib1","SARS-CoV-2","AGTCTCGTTATAACAA",23,228.39,10.14,-0.63,0.05,2.68,1.03,0,">1 nonsynonymous","F134A E141S L187H",3
"lib1","SARS-CoV-2","AGTCTCTAGCACGTTT",1,47.84,10.16,-0.61,0.11,2.62,1,0,">1 nonsynonymous","L5T Y123E Q163G",3
"lib1","SARS-CoV-2","AGTCTCTGGCCGCTTA",4,29.09,10.82,0.06,0.1,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTCTCTTTTCAGACA",1,12.84,10.33,-0.44,0.17,1.95,1.03,0.01,">1 nonsynonymous","A81Y K114A",2
"lib1","SARS-CoV-2","AGTCTGAAACTCTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46R L57R N107D D137V K198F",5
"lib1","SARS-CoV-2","AGTCTGAACAGAATCG",2,58.73,8.19,-2.57,0.11,1.91,1.13,0,">1 nonsynonymous","N13Y N64Q Y119L",3
"lib1","SARS-CoV-2","AGTCTGACCACATAGC",1,31.16,8.12,-2.65,0.12,2.88,1.07,0.01,">1 nonsynonymous","Y119W G174C L188Q S200A",4
"lib1","SARS-CoV-2","AGTCTGACCCCAAAGT",13,112.58,9.96,-0.8,0.07,2.52,1.1,0,"1 nonsynonymous","L162C",1
"lib1","SARS-CoV-2","AGTCTGACCCTATGTT",1,13.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6V V77Q V153T Y175S",4
"lib1","SARS-CoV-2","AGTCTGACGGGGCATA",2,18.22,6.85,-3.91,0.29,1.95,1.09,0,">1 nonsynonymous","D34I T85L N120V R127I D137R T201W",6
"lib1","SARS-CoV-2","AGTCTGAGATTTAACG",6,81.32,6.76,-4,0.36,1.5,1.14,0.02,">1 nonsynonymous","I28H I80T G174L",3
"lib1","SARS-CoV-2","AGTCTGCCATAATACC",12,79.89,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T46P G51R Y143D",3
"lib1","SARS-CoV-2","AGTCTGCCCTGCTACA",1,26.22,10.09,-0.67,0.05,2.84,1.03,0,">1 nonsynonymous","S41L N120L E154I",3
"lib1","SARS-CoV-2","AGTCTGCTCTCGTACT",3,38.43,10.56,-0.21,0.08,2.9,1.04,0,">1 nonsynonymous","A42L C61K",2
"lib1","SARS-CoV-2","AGTCTGCTTCTTGGCT",5,11.31,7.28,-3.49,0.37,2.51,1.1,0.07,">1 nonsynonymous","C61F F99S",2
"lib1","SARS-CoV-2","AGTCTGGAACGTGTCA",3,41.68,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","I2C K48V E76S L95N",4
"lib1","SARS-CoV-2","AGTCTGGAATCGCAGT",3,2.74,NA,NA,NA,NA,NA,NA,"stop","E10H S69G E76* Y143T",4
"lib1","SARS-CoV-2","AGTCTGGAATGCAAAC",2,42.05,10.4,-0.37,0.06,2.93,1.02,0,">1 nonsynonymous","C61L S129C S184V",3
"lib1","SARS-CoV-2","AGTCTGGTAATAAATC",4,1.44,NA,NA,NA,NA,NA,NA,"stop","E10* E141G P161S Y175V",4
"lib1","SARS-CoV-2","AGTCTGTCGCACCGGT",3,22.21,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S41V R124M",2
"lib1","SARS-CoV-2","AGTCTTAAATAAAATT",1,45.28,10.65,-0.11,0.07,2.87,1.09,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","AGTCTTAATCTTTGCT",2,26.68,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y66A K114T N157R P169Y",4
"lib1","SARS-CoV-2","AGTCTTACTATCCGAC",2,33.84,10.19,-0.57,0.06,2.72,1.01,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","AGTCTTAGGCAACGGA",1,42.97,10.77,0,0.1,2.89,1.07,0,">1 nonsynonymous","N1D F62A",2
"lib1","SARS-CoV-2","AGTCTTCAAATTAAAG",2,9.9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20H G101T K198L",3
"lib1","SARS-CoV-2","AGTCTTCATAGGGGAT",8,81.4,10.33,-0.44,0.05,2.89,1.02,0,">1 nonsynonymous","V37S D98L N151L",3
"lib1","SARS-CoV-2","AGTCTTCCTAGATACA",11,166.54,10.14,-0.63,0.06,2.51,1.05,0,">1 nonsynonymous","L5E G51Y C61E",3
"lib1","SARS-CoV-2","AGTCTTCCTCCACTTC",9,71.11,7.54,-3.22,0.42,1.5,1.01,0.06,">1 nonsynonymous","D112H S164F A192S T201K",4
"lib1","SARS-CoV-2","AGTCTTCTAAATGTAG",3,22.28,10.68,-0.09,0.09,2.86,1.09,0,">1 nonsynonymous","N4D C61T",2
"lib1","SARS-CoV-2","AGTCTTCTAGATTTAA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","N13* F44V P54C K87C T140C",5
"lib1","SARS-CoV-2","AGTCTTGAAAAACAGC",4,79.89,10.68,-0.09,0.04,2.94,1.01,0,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","AGTCTTGAGACAAAGT",2,41.99,7.12,-3.64,0.25,1.5,1.11,0.02,">1 nonsynonymous","T3A A14Q L38R Y91R",4
"lib1","SARS-CoV-2","AGTCTTGCAAGAATAA",2,24.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K26S F70L",2
"lib1","SARS-CoV-2","AGTCTTGGGAGAACTC",8,54.3,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","S41Q S53A I72R",3
"lib1","SARS-CoV-2","AGTCTTGTTGCAACAT",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G S41I Y123N",3
"lib1","SARS-CoV-2","AGTCTTTAAAATCCAA",12,130.89,9.29,-1.48,0.11,2.15,1.14,0.01,">1 nonsynonymous","A22M N118F",2
"lib1","SARS-CoV-2","AGTCTTTAATTCATTA",2,13.61,8.33,-2.43,0.25,1.63,1.08,0.04,">1 nonsynonymous","W106V G117A",2
"lib1","SARS-CoV-2","AGTCTTTTAAACCGGA",6,89,8.99,-1.78,0.2,1.5,1.1,0.02,">1 nonsynonymous","G9N D34V F44A D97C V153N",5
"lib1","SARS-CoV-2","AGTCTTTTCATAAACC",2,43.12,10.32,-0.44,0.06,2.81,1.07,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","AGTGAAAACACTATAA",2,42.6,10.07,-0.7,0.11,2.82,1,0,">1 nonsynonymous","S45D L60G F160M P169R",4
"lib1","SARS-CoV-2","AGTGAAAATAGATGTA",8,1.72,NA,NA,NA,NA,NA,NA,"stop","S36L P96*",2
"lib1","SARS-CoV-2","AGTGAAAATGTGCCCA",2,59.71,6,-4.76,0.96,1.5,1.14,0.01,">1 nonsynonymous","C6S K56S Y159E",3
"lib1","SARS-CoV-2","AGTGAAACAACGTATC",2,12.31,9.22,-1.54,0.16,2.15,1.11,0.01,">1 nonsynonymous","T15Q D34N G146D N151F",4
"lib1","SARS-CoV-2","AGTGAAACGCCCAAAT",1,12.32,6.98,-3.78,0.28,1.5,1.14,0.01,">1 nonsynonymous","T15S C158M S200C",3
"lib1","SARS-CoV-2","AGTGAAAGATATTAAC",2,8.88,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","D112N V181L",2
"lib1","SARS-CoV-2","AGTGAAATATATAGGA",4,50.79,10.66,-0.11,0.07,2.9,1.07,0,">1 nonsynonymous","V37M C61N D90K",3
"lib1","SARS-CoV-2","AGTGAAATCCTAGTTT",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49E N110G F185N",3
"lib1","SARS-CoV-2","AGTGAAATGACGATGA",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Q N107Y",2
"lib1","SARS-CoV-2","AGTGAAATTATCATGA",1,11.73,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","R16Q N120V S139F Y159R",4
"lib1","SARS-CoV-2","AGTGAAATTTGAAATG",8,54.94,6.02,-4.74,1.06,1.5,1.15,0.02,">1 nonsynonymous","W23K D137K",2
"lib1","SARS-CoV-2","AGTGAACAACATCGAG",6,7.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13S A42P R124G V173K",4
"lib1","SARS-CoV-2","AGTGAACATGCCTAAT",15,5.66,NA,NA,NA,NA,NA,NA,"stop","S19* V32A",2
"lib1","SARS-CoV-2","AGTGAACGCGACATTT",4,137.97,6,-4.76,0.63,1.5,1.14,0,">1 nonsynonymous","R27I Y143H N171K",3
"lib1","SARS-CoV-2","AGTGAACGCTAACATA",6,39.8,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N58T P96M L122A E135L F160D S200L",6
"lib1","SARS-CoV-2","AGTGAACTAGAACTGA",7,128.35,10.69,-0.08,0.04,2.82,1.07,0,"1 nonsynonymous","S139A",1
"lib1","SARS-CoV-2","AGTGAACTGCGTGTCA",3,30.24,6.19,-4.57,0.52,1.5,1.09,0.01,">1 nonsynonymous","N58Y V77T D90S D97L Q176L",5
"lib1","SARS-CoV-2","AGTGAACTGTGACGCT",14,156.38,10.76,0,0.06,2.9,1.06,0,">1 nonsynonymous","V173Y P197G",2
"lib1","SARS-CoV-2","AGTGAAGAACCCAGTG",2,38.75,10.27,-0.49,0.1,2.97,1.01,0,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","AGTGAAGAACGCATGG",5,184.98,10.83,0.06,0.06,2.91,1.03,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","AGTGAAGATAAAACTA",9,112.22,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36L D112P N151A",3
"lib1","SARS-CoV-2","AGTGAAGCTACTATAG",4,39.37,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y93L P161S",2
"lib1","SARS-CoV-2","AGTGAAGCTCCTAAAT",1,26.55,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15I D112L S139K",3
"lib1","SARS-CoV-2","AGTGAATAGTCAAATG",8,59.12,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","V103F",1
"lib1","SARS-CoV-2","AGTGAATCATATATGA",2,24.6,6.32,-4.45,0.72,1.5,1.09,0.04,">1 nonsynonymous","S43R V71Y I88N",3
"lib1","SARS-CoV-2","AGTGAATCCGTTTTAC",1,14.2,10.78,0.02,0.09,2.87,1.07,0.01,">1 nonsynonymous","Y35F K56T L162M L187Q",4
"lib1","SARS-CoV-2","AGTGAATCTATGCAAT",1,7.57,10.37,-0.4,0.22,2.68,1.32,0.01,">1 nonsynonymous","R27E T201Q",2
"lib1","SARS-CoV-2","AGTGAATGCATTCTAA",8,173.82,10.37,-0.39,0.04,2.9,1.05,0,">1 nonsynonymous","Y39F R136S",2
"lib1","SARS-CoV-2","AGTGAATTTAAAACGT",5,63.27,10.06,-0.71,0.08,2.84,1.02,0,">1 nonsynonymous","C61V D75R G155T",3
"lib1","SARS-CoV-2","AGTGAATTTCGATAGA",2,55.42,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35T C49V P161M",3
"lib1","SARS-CoV-2","AGTGAATTTGGGACCA",3,716.07,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F12G N64D N107T A145I G155Y Q176D",6
"lib1","SARS-CoV-2","AGTGACAAACATGCAT",1,12.51,9.24,-1.52,0.3,1.5,1,0.04,">1 nonsynonymous","L5V L60D Y91R",3
"lib1","SARS-CoV-2","AGTGACAACCGGCATG",4,61.74,10.78,0.02,0.06,2.86,1.08,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","AGTGACAAGAACTTAT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","K87N S139* R179M T201D",4
"lib1","SARS-CoV-2","AGTGACAAGGTTGAGG",7,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K Y165D",2
"lib1","SARS-CoV-2","AGTGACAATAAAAGAT",3,58.15,10.77,0,0.08,2.84,1.11,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","AGTGACAATATAATCT",4,32.7,10.6,-0.16,0.09,2.81,1.14,0,">1 nonsynonymous","L57F N110D",2
"lib1","SARS-CoV-2","AGTGACACTTTAAGTC",8,159.3,6.41,-4.36,0.54,1.5,1.13,0.02,">1 nonsynonymous","S147P G172N S184Y",3
"lib1","SARS-CoV-2","AGTGACAGCTCCAATA",3,30.82,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64C C158I",2
"lib1","SARS-CoV-2","AGTGACATAAGGGTGA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","S45N Y50L E141R P149* G152R F185V",6
"lib1","SARS-CoV-2","AGTGACCAAGTTTAAT",1,19.52,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","L5R R25L D98V T148C P177L",5
"lib1","SARS-CoV-2","AGTGACCAGTAAACTT",7,40.06,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G9Q R16S A18T A105D V153F",5
"lib1","SARS-CoV-2","AGTGACCCACGCAAAA",9,65.24,6.15,-4.61,0.88,1.5,1.22,0.02,">1 nonsynonymous","C61L A105W Y165S P197S",4
"lib1","SARS-CoV-2","AGTGACCCGTGAAATA",1,9.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V11S L60G W106M",3
"lib1","SARS-CoV-2","AGTGACGAGACAATTA",3,32.91,10.89,0.12,0.08,2.9,1.05,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","AGTGACGAGTGATTTC",1,29.06,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Q84S N107R S113R Y159D",4
"lib1","SARS-CoV-2","AGTGACTCTATCTGAA",4,95.43,10.46,-0.3,0.04,2.82,1.07,0,">1 nonsynonymous","S36L N120S I138K K198L",4
"lib1","SARS-CoV-2","AGTGACTGCGAACCAC",4,102.97,6.63,-4.14,0.39,1.5,1.18,0.02,">1 nonsynonymous","D97Q K128V V173L P177C",4
"lib1","SARS-CoV-2","AGTGACTGCTGGCGAG",7,120.15,10.32,-0.45,0.05,2.91,1.01,0,">1 nonsynonymous","Y35C S41D N64S",3
"lib1","SARS-CoV-2","AGTGAGAAAAATTAAT",8,111.4,9.26,-1.5,0.14,1.88,1.1,0.01,">1 nonsynonymous","L38T C61I T100Y F156P",4
"lib1","SARS-CoV-2","AGTGAGACATTTAGGA",4,31.27,6,-4.76,1.29,3,1.2,0,">1 nonsynonymous","Y50P K128F Q168A",3
"lib1","SARS-CoV-2","AGTGAGACGTTAAATC",2,22.58,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6I V77E D98P G117S K128S S139T Q168W V173K",8
"lib1","SARS-CoV-2","AGTGAGACGTTTATGC",1,7.62,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I28R D137P",2
"lib1","SARS-CoV-2","AGTGAGAGCCCCGCCA",4,123.17,10.79,0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGAGATAAGTACGG",2,35.45,10.75,-0.01,0.07,2.86,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTGAGATAATTCTAC",1,1.22,NA,NA,NA,NA,NA,NA,"stop","F47* K114N",2
"lib1","SARS-CoV-2","AGTGAGATATCTATTA",2,12.69,8.04,-2.73,0.34,1.9,1.23,0.04,">1 nonsynonymous","N107G G166W",2
"lib1","SARS-CoV-2","AGTGAGATGATTTACT",2,8.95,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","S41H N92Y S108P",3
"lib1","SARS-CoV-2","AGTGAGATTTCCAGGA",6,45.85,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I2R I72S N107L S184T",4
"lib1","SARS-CoV-2","AGTGAGATTTGTTACG",3,12.06,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","S19R G74P",2
"lib1","SARS-CoV-2","AGTGAGCAACGGTAAT",10,275.73,10.77,0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGAGCATCTAAAAT",1,90.15,10.76,0,0.07,2.97,1,0,">1 nonsynonymous","N171I P191G",2
"lib1","SARS-CoV-2","AGTGAGCCCTGCGCAA",2,54.15,7.75,-3.02,0.2,1.5,1.21,0.01,">1 nonsynonymous","F8L D98S N107M S184Y",4
"lib1","SARS-CoV-2","AGTGAGCGAAAATTCC",3,14.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10S D59P F99D",3
"lib1","SARS-CoV-2","AGTGAGCGGCCAGAAA",3,52.36,9.64,-1.13,0.13,2.1,1.06,0.01,">1 nonsynonymous","G9M V32F F44D V65F",4
"lib1","SARS-CoV-2","AGTGAGCTCTAAAGGC",3,14.57,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","L60N G116Y V181N",3
"lib1","SARS-CoV-2","AGTGAGCTTGTCAAAA",1,69.12,10.54,-0.22,0.06,2.8,1.05,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","AGTGAGGAACATATCG",1,17.46,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S69V F99R",2
"lib1","SARS-CoV-2","AGTGAGGAGGAATAAA",4,27.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L95S V103L",2
"lib1","SARS-CoV-2","AGTGATAATAAAGAAG",4,14.18,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V65E S129W F167R",3
"lib1","SARS-CoV-2","AGTGATAATGCGTTCG",4,10.8,10.27,-0.49,0.24,1.98,1.03,0.02,">1 nonsynonymous","V37D P96R N110I",3
"lib1","SARS-CoV-2","AGTGATACACCTAAAA",4,61.6,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","D59G G86R",2
"lib1","SARS-CoV-2","AGTGATACTGCTAAGT",9,135.4,9.91,-0.86,0.08,2.07,1.04,0,">1 nonsynonymous","R73K Q84W",2
"lib1","SARS-CoV-2","AGTGATACTTGCGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31I S45R V115* P169S L183C",5
"lib1","SARS-CoV-2","AGTGATAGGATAAAGG",2,11.82,10.16,-0.61,0.14,2.76,1,0.01,">1 nonsynonymous","V11I N40T T46M I138W T201G",5
"lib1","SARS-CoV-2","AGTGATATGGGGAATT",3,111.78,10.65,-0.11,0.08,2.49,1.06,0,">1 nonsynonymous","L5V D59K",2
"lib1","SARS-CoV-2","AGTGATATTGCGCAGA",1,38.55,10.16,-0.61,0.11,2.58,1,0,">1 nonsynonymous","S41I P96D T100I",3
"lib1","SARS-CoV-2","AGTGATCAGCTAATAA",1,1.49,NA,NA,NA,NA,NA,NA,"stop","C6T R27Q S36M S45E C49P V71* D90T N130F N157Q",9
"lib1","SARS-CoV-2","AGTGATCCAATAAATA",2,50.83,10.56,-0.21,0.06,2.86,1,0,"1 nonsynonymous","N24Y",1
"lib1","SARS-CoV-2","AGTGATCCCTGACCCT",2,66.65,10.19,-0.58,0.09,2.51,1,0,">1 nonsynonymous","E135I F160R",2
"lib1","SARS-CoV-2","AGTGATCGCCGTACAC",4,106.61,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","R179F",1
"lib1","SARS-CoV-2","AGTGATCTAAGGTTAC",12,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P D98K L131Y L162S",4
"lib1","SARS-CoV-2","AGTGATCTCCGCATAC",2,4.23,NA,NA,NA,NA,NA,NA,"stop","A14S T46* Y119T I138R G174K",5
"lib1","SARS-CoV-2","AGTGATGATTTATTTA",2,32.83,7.53,-3.23,0.45,1.57,1.14,0.07,">1 nonsynonymous","P96W A105T S113Y S184C",4
"lib1","SARS-CoV-2","AGTGATGTAATGGGAA",3,10.71,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L5S C49A D112Y P149H P191V",5
"lib1","SARS-CoV-2","AGTGATGTCCAGCCAA",2,16.61,6.05,-4.72,1.47,1.5,1.32,0.04,">1 nonsynonymous","I2L G101C",2
"lib1","SARS-CoV-2","AGTGATTACATGCCCT",2,36.43,9.78,-0.98,0.13,2.43,1.05,0.01,">1 nonsynonymous","I104L V115G S139H",3
"lib1","SARS-CoV-2","AGTGATTAGAATAACG",1,31.08,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","F70N Y91W",2
"lib1","SARS-CoV-2","AGTGATTAGCGTGCTG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","R16* C61P I104E N110A",4
"lib1","SARS-CoV-2","AGTGATTCCGCAAATT",3,43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A81I K87S N118K",3
"lib1","SARS-CoV-2","AGTGATTTATATACAA",3,11.05,8.24,-2.52,0.32,2.31,1.18,0.02,"1 nonsynonymous","S113P",1
"lib1","SARS-CoV-2","AGTGATTTTTGAAATA",8,109.37,10.25,-0.51,0.05,2.92,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","AGTGCAAAACAAAAAT",5,220.36,10.79,0.03,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGCAAAAGGCGTTA",1,14.17,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F8S L60R V77M",3
"lib1","SARS-CoV-2","AGTGCAAAATACTCGT",5,67.56,9.38,-1.38,0.11,2.48,1.1,0,">1 nonsynonymous","C6H I142F",2
"lib1","SARS-CoV-2","AGTGCAAACTAAGAAC",5,92.78,10.19,-0.57,0.09,2.57,1.07,0,"1 nonsynonymous","E135F",1
"lib1","SARS-CoV-2","AGTGCAAACTACAAAA",3,86.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C A33P P96N",3
"lib1","SARS-CoV-2","AGTGCAAAGATGCCCT",11,46.56,8.84,-1.92,0.21,1.5,1.24,0.02,">1 nonsynonymous","T3V P82T",2
"lib1","SARS-CoV-2","AGTGCAAAGCATAGCC",1,51.71,10.32,-0.45,0.07,2.83,1.06,0,">1 nonsynonymous","S45Y Q144A",2
"lib1","SARS-CoV-2","AGTGCAAATGCACATG",11,286.11,10.62,-0.14,0.03,2.93,1.01,0,"1 nonsynonymous","Y123V",1
"lib1","SARS-CoV-2","AGTGCAACAGATTATG",3,48.86,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S53T P96L L122R E135V Y143R",5
"lib1","SARS-CoV-2","AGTGCAAGAACTCAAC",2,20.69,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N58D N107D Y119N Y143G C158P",5
"lib1","SARS-CoV-2","AGTGCAAGCTCATTTA",2,38.27,10.15,-0.62,0.1,2.65,1.03,0,">1 nonsynonymous","P54Y A89V",2
"lib1","SARS-CoV-2","AGTGCAAGCTTAGTAA",3,48.81,6,-4.76,1.23,1.5,1.24,0.01,">1 nonsynonymous","L38G F70Y A81C G117W",4
"lib1","SARS-CoV-2","AGTGCAAGGGAAACGG",6,31.38,9.97,-0.8,0.12,2.34,1.11,0.01,">1 nonsynonymous","Y21V L60W P191T",3
"lib1","SARS-CoV-2","AGTGCAAGTAAGCGCA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","K56* L60T N92V G152S",4
"lib1","SARS-CoV-2","AGTGCAATGAACAAAT",1,6.4,6,-4.76,0.44,3,1,0,">1 nonsynonymous","E76R K94H Y119Q",3
"lib1","SARS-CoV-2","AGTGCAATGAGTAATC",3,30.64,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P82A N92K N118Y P133S N151I",5
"lib1","SARS-CoV-2","AGTGCAATTAGCCGAC",8,2.3,NA,NA,NA,NA,NA,NA,"stop","Y123* Q163M",2
"lib1","SARS-CoV-2","AGTGCACAAGCCCGTA",7,63.26,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N58V I88R D97F Y123E P133C",5
"lib1","SARS-CoV-2","AGTGCACATAAATGCT",7,28.35,7.21,-3.55,0.49,1.5,1.11,0.07,">1 nonsynonymous","K48L N64R S69G",3
"lib1","SARS-CoV-2","AGTGCACCAATTAGAA",1,9.13,7.5,-3.27,0.3,1.5,1.22,0.05,">1 nonsynonymous","W106T G117R",2
"lib1","SARS-CoV-2","AGTGCACCGAATACGT",1,8.23,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T85I L95D G166L Q176R",4
"lib1","SARS-CoV-2","AGTGCACCTATGAATC",9,1.39,NA,NA,NA,NA,NA,NA,"stop","E10V C31L Y39K D98S W106E G174* A190G",7
"lib1","SARS-CoV-2","AGTGCACCTATTACAT",2,77.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D68V Y91T",2
"lib1","SARS-CoV-2","AGTGCACGTCTGATGG",2,43.37,10.78,0.01,0.1,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGCACGTTAAAATC",4,34.45,9.6,-1.17,0.12,2.27,1.16,0.01,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","AGTGCACTAATCTTCT",4,44.11,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15I N40H T55C R73A K94S N130L I142K",7
"lib1","SARS-CoV-2","AGTGCAGACTAGCCAG",6,31.74,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I88V F126L S139P N157I",4
"lib1","SARS-CoV-2","AGTGCAGTCATTAACG",4,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T P82R Q163I",3
"lib1","SARS-CoV-2","AGTGCAGTTGCAGTGA",4,30.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28L N58V I72G G83R A192L",5
"lib1","SARS-CoV-2","AGTGCATATAATCACC",8,81.3,8.82,-1.94,0.08,2.75,1.19,0,">1 nonsynonymous","K114D N120T N151F",3
"lib1","SARS-CoV-2","AGTGCATATAGGTAGC",12,0.23,NA,NA,NA,NA,NA,NA,"stop","Y66* T100I S164F",3
"lib1","SARS-CoV-2","AGTGCATATAGTATCT",2,37.28,10.73,-0.04,0.1,2.9,1.04,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","AGTGCATATCAGAGTT",4,46.72,9.81,-0.96,0.19,1.69,1.17,0.01,">1 nonsynonymous","T63N Q84K D90I",3
"lib1","SARS-CoV-2","AGTGCATCTACACAAA",7,123.76,10.75,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGCATTCGATCGAG",2,1.53,NA,NA,NA,NA,NA,NA,"stop","D98* N120T E154D",3
"lib1","SARS-CoV-2","AGTGCATTGCAGAGTA",3,43.66,10.44,-0.32,0.04,2.86,1.07,0,"1 nonsynonymous","D59V",1
"lib1","SARS-CoV-2","AGTGCATTTGGATCAA",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G C61P R78S S129V",4
"lib1","SARS-CoV-2","AGTGCCACAATAAAAT",4,77.47,10.46,-0.31,0.04,2.9,1.05,0,">1 nonsynonymous","N4A F156A",2
"lib1","SARS-CoV-2","AGTGCCACCAAAGTAA",2,19.1,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","F17L G51M Y91H C195L",4
"lib1","SARS-CoV-2","AGTGCCAGGCCATAAT",2,46.05,6.21,-4.56,0.94,1.5,1.23,0.03,">1 nonsynonymous","K56A N92S C150Y",3
"lib1","SARS-CoV-2","AGTGCCATAACTACTG",4,0.65,NA,NA,NA,NA,NA,NA,"stop","T15M D90I Q176*",3
"lib1","SARS-CoV-2","AGTGCCATATATGCGG",9,142.99,10.25,-0.51,0.04,2.87,1.03,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","AGTGCCATCCTCGTCA",1,0.06,NA,NA,NA,NA,NA,NA,"stop","S19W C61G V71C G86C N120F Y175G T201*",7
"lib1","SARS-CoV-2","AGTGCCCACCCTAATT",8,117.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9K F44T T63H Q84P S108A F167A",6
"lib1","SARS-CoV-2","AGTGCCCCCAACTTCT",4,31.84,9.88,-0.89,0.32,1.5,1.07,0.05,">1 nonsynonymous","T15D K94F S129T",3
"lib1","SARS-CoV-2","AGTGCCCGTGACGACG",9,4.95,NA,NA,NA,NA,NA,NA,"stop","I72E Y91H V173*",3
"lib1","SARS-CoV-2","AGTGCCCTACAACAAG",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121G E135R",2
"lib1","SARS-CoV-2","AGTGCCGACCATAAGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","N4T F17N G83* P177S",4
"lib1","SARS-CoV-2","AGTGCCGTTCCTACCT",4,176.27,10.49,-0.28,0.04,2.95,1,0,">1 nonsynonymous","A14D R16K",2
"lib1","SARS-CoV-2","AGTGCCTTGCTTAGCA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q T63S",2
"lib1","SARS-CoV-2","AGTGCGAATGGAATAG",2,30.51,7.38,-3.39,0.29,1.5,1.1,0.02,">1 nonsynonymous","Y50L D90R",2
"lib1","SARS-CoV-2","AGTGCGCATATAGATA",10,188.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94N N130L Y175G",3
"lib1","SARS-CoV-2","AGTGCGCCCCGGAGGA",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N24L C31V K56W D90Y W106R",6
"lib1","SARS-CoV-2","AGTGCGCTACCACCTG",10,2.85,NA,NA,NA,NA,NA,NA,"stop","Y39N F62S R73F N107*",4
"lib1","SARS-CoV-2","AGTGCGGAAACCTCGA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","G9* P161V",2
"lib1","SARS-CoV-2","AGTGCGTCCCGAACAT",4,5.22,NA,NA,NA,NA,NA,NA,"stop","T3Q Y50H D90* E154N T193P",5
"lib1","SARS-CoV-2","AGTGCGTTATGAGGGG",1,10.68,6,-4.76,1.42,2.22,1.33,0.02,">1 nonsynonymous","Y21F K94L F156I T193I",4
"lib1","SARS-CoV-2","AGTGCTAAAAATACGA",8,68.44,6,-4.76,0.91,1.5,1.15,0.01,">1 nonsynonymous","N92K A105M S129G P149S",4
"lib1","SARS-CoV-2","AGTGCTAAGCTTAAGA",4,50.84,10.83,0.06,0.09,2.9,1.09,0,">1 nonsynonymous","S36E E141Q",2
"lib1","SARS-CoV-2","AGTGCTACACGACACG",3,32.25,10.33,-0.44,0.1,2.62,1,0,">1 nonsynonymous","Y66R E141S",2
"lib1","SARS-CoV-2","AGTGCTACACTGAGGT",5,22.58,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T100L W106D N130V E135K",4
"lib1","SARS-CoV-2","AGTGCTATTTGAGCAG",2,15.43,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N92Y W106G",2
"lib1","SARS-CoV-2","AGTGCTCCCACACCAT",7,36.92,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S41T V65I K94G A105I A145M",5
"lib1","SARS-CoV-2","AGTGCTCCGCGATGTT",6,29.15,10.91,0.15,0.08,2.93,1.02,0,">1 nonsynonymous","A18P Y123F",2
"lib1","SARS-CoV-2","AGTGCTCCGGTTAAGG",13,111.32,10.2,-0.56,0.08,2.64,1,0,">1 nonsynonymous","L5H D98F S139N",3
"lib1","SARS-CoV-2","AGTGCTCTTATAGGCT",8,148.59,10.82,0.05,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGCTGCAAAGTGCT",1,3.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","AGTGCTGCACCACGAC",6,36.82,10.75,-0.01,0.05,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTGCTGTAATCTCCC",4,29.3,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6P D90S R127H T140R G152L",5
"lib1","SARS-CoV-2","AGTGCTTAACGCCCTT",1,19.39,8.7,-2.07,0.24,1.66,1.21,0.02,">1 nonsynonymous","S36A K94L",2
"lib1","SARS-CoV-2","AGTGCTTACGATGGCA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","Y50S Q84* D97L D112A",4
"lib1","SARS-CoV-2","AGTGCTTATCTGATTA",3,19.66,10.9,0.13,0.09,2.88,1.03,0,"1 nonsynonymous","P197M",1
"lib1","SARS-CoV-2","AGTGCTTATGATACCC",6,88.63,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25F F44E F70W N120A N157H",5
"lib1","SARS-CoV-2","AGTGCTTATTACTGTG",4,1.26,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AGTGCTTCTTGTGTAT",7,51.93,8.8,-1.96,0.28,1.5,1,0.04,">1 nonsynonymous","S36M C61L S129W F185P",4
"lib1","SARS-CoV-2","AGTGCTTGGTAATATT",12,87.88,8.48,-2.28,0.13,1.91,1.14,0.01,">1 nonsynonymous","G166V V181L",2
"lib1","SARS-CoV-2","AGTGGAACAAAAGAAT",2,15.95,6.81,-3.95,0.43,1.5,1.09,0.03,">1 nonsynonymous","S45F N64T R127D P197L",4
"lib1","SARS-CoV-2","AGTGGAACAAGACCAA",10,31.91,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L38S G152M T170G R179E",4
"lib1","SARS-CoV-2","AGTGGAACGTAACACT",4,69.83,10.91,0.14,0.09,2.91,1.04,0,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","AGTGGAAGAATCGACA",1,13.42,10.13,-0.63,0.13,2.81,1,0.01,">1 nonsynonymous","A33V F44T K128I",3
"lib1","SARS-CoV-2","AGTGGAATATGCATAA",6,5.68,10.38,-0.39,0.12,1.91,1,0,">1 nonsynonymous","C6Q T201P",2
"lib1","SARS-CoV-2","AGTGGAATTTCTACGG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S C49R C61P C158H",4
"lib1","SARS-CoV-2","AGTGGACAACACGATA",11,1.15,NA,NA,NA,NA,NA,NA,"stop","T15N K48* Q84E V182T",4
"lib1","SARS-CoV-2","AGTGGACAAGGCCCAG",5,3.85,NA,NA,NA,NA,NA,NA,"stop","G9V T63A F70I P96R N107* G116W Y119* R124A Y175G",9
"lib1","SARS-CoV-2","AGTGGACAGAATCCAC",4,33.88,7.59,-3.18,0.36,1.52,1.18,0.03,">1 nonsynonymous","G146S P161M G174A",3
"lib1","SARS-CoV-2","AGTGGACATTTAACAA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","G51V K87I P133Q E141* S147C",5
"lib1","SARS-CoV-2","AGTGGACCTGCACCTA",7,115.87,9.73,-1.04,0.13,1.9,1.12,0.01,">1 nonsynonymous","A14R F44A S139H",3
"lib1","SARS-CoV-2","AGTGGACGACTTACAT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","V32K F99Y D137F Q176* V181D",5
"lib1","SARS-CoV-2","AGTGGACTATGATCAA",3,26.68,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F99S K128E E141N",3
"lib1","SARS-CoV-2","AGTGGAGCATATTAGT",1,23.91,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S45C T100L N107P R136A G172L",5
"lib1","SARS-CoV-2","AGTGGAGCCGCCCAAA",1,33.79,6,-4.76,2,3,1.09,0,">1 nonsynonymous","R25N V52N D97Q T148V",4
"lib1","SARS-CoV-2","AGTGGAGTATAATTAG",1,16.32,9.29,-1.48,0.31,1.5,1,0.04,">1 nonsynonymous","N4I A14S A22W D90N",4
"lib1","SARS-CoV-2","AGTGGAGTCACTATTG",1,15.04,10.04,-0.72,0.1,2.7,1,0,">1 nonsynonymous","K87A S184E",2
"lib1","SARS-CoV-2","AGTGGAGTTAGCTCTA",5,32.66,10.79,0.03,0.08,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGGATACATTTAAG",2,7.38,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y66P E141V P149N",3
"lib1","SARS-CoV-2","AGTGGCAAAAAAGAAA",6,140.79,10.19,-0.58,0.08,2.33,1.01,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AGTGGCAAAATTTATA",3,5.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6L L60C D90I V103S",4
"lib1","SARS-CoV-2","AGTGGCACTAAGAGAG",2,73.56,10.91,0.15,0.07,2.97,1.01,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","AGTGGCATAAAGATAA",3,66.9,10.29,-0.48,0.07,2.85,1,0,"1 nonsynonymous","Y35Q",1
"lib1","SARS-CoV-2","AGTGGCATTTCCGTAC",3,36.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5I A33L F99D D112M C158L",5
"lib1","SARS-CoV-2","AGTGGCCCAAACATCA",2,27.93,7.69,-3.07,0.27,1.5,1.1,0.02,">1 nonsynonymous","C6I Y91A",2
"lib1","SARS-CoV-2","AGTGGCCCAACCAGGC",8,186.33,10.52,-0.24,0.04,2.89,1.06,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","AGTGGCCCTTTATATC",4,1.1,NA,NA,NA,NA,NA,NA,"stop","Y35T T46V Y91W D97* N118L S200*",6
"lib1","SARS-CoV-2","AGTGGCCGAGAAGTCT",5,12.01,NA,NA,NA,NA,NA,NA,"stop","A14M A81* D97R V103* T201D",5
"lib1","SARS-CoV-2","AGTGGCCTTAACATAA",8,41.23,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12T R25Y T100A Y123D K128F",5
"lib1","SARS-CoV-2","AGTGGCGAGGTAGCAA",6,69.16,10.61,-0.15,0.04,2.91,1.05,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","AGTGGCGTATAGGTTT",1,21.56,9.39,-1.38,0.11,2.81,1.11,0,">1 nonsynonymous","R27V T170N",2
"lib1","SARS-CoV-2","AGTGGCGTATCACCAG",7,77.24,10.18,-0.59,0.07,2.13,1.04,0,">1 nonsynonymous","N24L Q84R",2
"lib1","SARS-CoV-2","AGTGGCTCACATGCCG",6,23.54,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F99M A105Y A145F",3
"lib1","SARS-CoV-2","AGTGGCTGAAACAGAG",8,129.92,9.72,-1.04,0.07,1.97,1.09,0,">1 nonsynonymous","S19K T140V",2
"lib1","SARS-CoV-2","AGTGGGAACATCTCGC",3,25.24,10.24,-0.52,0.08,2.78,1.11,0,"1 nonsynonymous","P169M",1
"lib1","SARS-CoV-2","AGTGGGAGAGGACAAA",2,56.25,6,-4.76,2,2,1.25,0.01,">1 nonsynonymous","T46P F70H P96I K128I G155E Y165S",6
"lib1","SARS-CoV-2","AGTGGGATAGTAGATT",3,14.87,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S36C A105F R127A",3
"lib1","SARS-CoV-2","AGTGGGATTGTGTGGT",2,28.7,6.4,-4.37,0.63,1.5,1.07,0.03,">1 nonsynonymous","N24R F44H D68N G83Y A190K",5
"lib1","SARS-CoV-2","AGTGGGCAAAGTCGTC",6,96.13,6,-4.76,1.88,1.5,1.15,0.02,">1 nonsynonymous","N64R D112Q",2
"lib1","SARS-CoV-2","AGTGGGCCTATTCACA",2,37,10.66,-0.1,0.03,2.94,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","AGTGGGGCAACCAGTG",13,2.77,NA,NA,NA,NA,NA,NA,"stop","K26D F167* S184V",3
"lib1","SARS-CoV-2","AGTGGGTAGGTTGAAA",1,26.63,8.76,-2,0.21,1.5,1.13,0.02,">1 nonsynonymous","G51S N58E A105G",3
"lib1","SARS-CoV-2","AGTGGGTTGATCGATA",4,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130F K198Q",2
"lib1","SARS-CoV-2","AGTGGTAAATGCATAT",7,116.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L Y39T V71W R124I",4
"lib1","SARS-CoV-2","AGTGGTACTATATCGC",1,42.13,10.02,-0.74,0.12,2.43,1.07,0,"1 nonsynonymous","F12W",1
"lib1","SARS-CoV-2","AGTGGTACTTTCGATA",3,5.84,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","T3N N13I T63M G86I",4
"lib1","SARS-CoV-2","AGTGGTATAAAAAAAT",5,713.54,10.35,-0.41,0.03,2.82,1.01,0,">1 nonsynonymous","A33I S43P L187K",3
"lib1","SARS-CoV-2","AGTGGTCGACAAATCG",5,54.96,6.53,-4.24,0.4,1.5,1.15,0.02,">1 nonsynonymous","F44G L57A V71Q",3
"lib1","SARS-CoV-2","AGTGGTGACTGGCCTT",8,107.12,7.28,-3.48,0.32,1.5,1.19,0.03,">1 nonsynonymous","T3F D34L D90Y P197D",4
"lib1","SARS-CoV-2","AGTGGTGAGTCAGACT",5,157.5,10.74,-0.03,0.04,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTGGTGGAGTACACT",3,65.01,9.66,-1.1,0.08,2.65,1.07,0,">1 nonsynonymous","Q84C K87G P133A",3
"lib1","SARS-CoV-2","AGTGGTGGCGTCTATT",5,72.22,10.69,-0.08,0.07,2.9,1.07,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","AGTGGTGGGAGAAAAT",7,0.12,NA,NA,NA,NA,NA,NA,"stop","S36* F156H",2
"lib1","SARS-CoV-2","AGTGGTGTCCTCCATC",2,93.12,8.17,-2.6,0.27,1.5,1.07,0.03,">1 nonsynonymous","Q168G V173T",2
"lib1","SARS-CoV-2","AGTGGTTATCTCCCTA",5,0.25,NA,NA,NA,NA,NA,NA,"stop","C6G A42* N109R",3
"lib1","SARS-CoV-2","AGTGGTTGGGTATTAA",12,24.72,6,-4.76,0.93,3,1.15,0.01,">1 nonsynonymous","T3K P96L S139D T148K G152V",5
"lib1","SARS-CoV-2","AGTGTAACTGTTTAAA",2,14.32,9.16,-1.6,0.16,2.28,1.12,0.01,">1 nonsynonymous","S45L D59R A105W S147T F156L",5
"lib1","SARS-CoV-2","AGTGTAATGATTTTAG",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R V20M D59P T201I",4
"lib1","SARS-CoV-2","AGTGTAATTCGATTGA",1,41.5,10.54,-0.22,0.06,2.89,1.02,0,">1 nonsynonymous","I2K T15D G83H",3
"lib1","SARS-CoV-2","AGTGTAATTTACTTAG",3,26.42,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","E10V C31R K94L C158L",4
"lib1","SARS-CoV-2","AGTGTACACACCTGCG",1,21.72,8.58,-2.19,0.2,1.5,1.15,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","AGTGTACGGTCACTAA",7,1.2,NA,NA,NA,NA,NA,NA,"stop","V11C N120* H189Y",3
"lib1","SARS-CoV-2","AGTGTACTCGCTACCA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","L5* L57W P82D Y119C Y165T R179S",6
"lib1","SARS-CoV-2","AGTGTAGCCTTCATAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","G9* V37N C61K I72M P96R S184I",6
"lib1","SARS-CoV-2","AGTGTATACAATGAGC",7,103.24,10.1,-0.66,0.08,2.62,1.05,0,">1 nonsynonymous","P54K V65W",2
"lib1","SARS-CoV-2","AGTGTATACTATAAAC",1,5.32,6,-4.76,2,3,1.03,0,">1 nonsynonymous","K87M I104S E135P L162M Q168M",5
"lib1","SARS-CoV-2","AGTGTATTCTTATCGA",4,119.65,9.88,-0.89,0.1,2.26,1.02,0,">1 nonsynonymous","S129L Y178S",2
"lib1","SARS-CoV-2","AGTGTCAGGGAATCCA",2,9.96,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","A105S C150S G155A",3
"lib1","SARS-CoV-2","AGTGTCAGTATAACTC",8,70.18,10.51,-0.26,0.05,2.9,1.01,0,">1 nonsynonymous","D90T K132Q",2
"lib1","SARS-CoV-2","AGTGTCCATCCACCTA",7,110.9,9.49,-1.27,0.05,2.87,1.04,0,">1 nonsynonymous","C61L N118G",2
"lib1","SARS-CoV-2","AGTGTCCTAAAAAACC",3,82.87,8.26,-2.51,0.16,1.89,1.11,0.01,"1 nonsynonymous","D112H",1
"lib1","SARS-CoV-2","AGTGTCGATCAATCCT",6,48.11,9.66,-1.11,0.15,1.95,1.1,0.01,">1 nonsynonymous","A81H K94H",2
"lib1","SARS-CoV-2","AGTGTCGTTGAATACC",1,43.9,7.36,-3.4,0.24,1.5,1.15,0.02,">1 nonsynonymous","F62G P96H T170S L187F",4
"lib1","SARS-CoV-2","AGTGTCTAAACTAAAG",6,82.02,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A18M G86W I138S",3
"lib1","SARS-CoV-2","AGTGTCTAATGGGCCA",1,32.26,9.72,-1.05,0.14,2.02,1.08,0.01,">1 nonsynonymous","L38N P149K",2
"lib1","SARS-CoV-2","AGTGTCTATATTCAAG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","K26A Y35* L60*",3
"lib1","SARS-CoV-2","AGTGTCTCACCTACCT",9,41.85,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P96Y S164L Y178S",3
"lib1","SARS-CoV-2","AGTGTCTGACAGTAAT",2,59.34,6.28,-4.48,0.57,1.5,1.13,0.02,">1 nonsynonymous","C61S N107S R136C",3
"lib1","SARS-CoV-2","AGTGTCTGATACCATG",6,98.32,10.63,-0.13,0.06,2.94,1.02,0,">1 nonsynonymous","K128L Y178F",2
"lib1","SARS-CoV-2","AGTGTCTGGAGCATCT",5,91.2,8.71,-2.06,0.12,2.69,1.08,0.01,">1 nonsynonymous","T100I Y119L G174R",3
"lib1","SARS-CoV-2","AGTGTCTTGTCACCAT",1,11.21,10.53,-0.23,0.05,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTGTGACGACACACA",5,54.41,10.64,-0.12,0.05,2.91,1.03,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","AGTGTGCATGATGACT",7,97.92,10.6,-0.16,0.05,2.92,1.03,0,">1 nonsynonymous","N1K C61G",2
"lib1","SARS-CoV-2","AGTGTGCCTAAACCAA",2,45,10.61,-0.15,0.1,2.91,1.08,0.01,"1 nonsynonymous","P7N",1
"lib1","SARS-CoV-2","AGTGTGTCATTTGAAA",2,0.91,NA,NA,NA,NA,NA,NA,"stop","L5I K56T G83N N120V C150R N151K Q176* H189Y",8
"lib1","SARS-CoV-2","AGTGTGTTCAAAGTCT",4,18.77,10.5,-0.27,0.07,2.92,1.05,0,"1 nonsynonymous","K87P",1
"lib1","SARS-CoV-2","AGTGTTAAGAACTTAA",10,41.52,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C6L Y35S A89W E135A Y143T P149K",6
"lib1","SARS-CoV-2","AGTGTTATGTCACTTC",1,22.8,6,-4.76,2,1.5,1.04,0.02,">1 nonsynonymous","A14D A22L V103M L122A T140P Q176P",6
"lib1","SARS-CoV-2","AGTGTTATTGGTGATC",2,46.81,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","AGTGTTCACAACGTTC",17,104.48,7.92,-2.84,0.27,1.5,1.19,0.02,">1 nonsynonymous","S69V N171C",2
"lib1","SARS-CoV-2","AGTGTTCATATTAAAC",5,30.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88L G117M K132C",3
"lib1","SARS-CoV-2","AGTGTTCCTGCGTATT",1,28.34,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","N4L S19Y Y119E I138S",4
"lib1","SARS-CoV-2","AGTGTTCGATAAAAAA",8,63.33,7.48,-3.28,0.27,1.5,1.14,0.02,">1 nonsynonymous","D98L W106L",2
"lib1","SARS-CoV-2","AGTGTTTCACACGTAC",22,182.52,7.17,-3.59,0.24,1.5,1.17,0.01,">1 nonsynonymous","I88T S184E",2
"lib1","SARS-CoV-2","AGTGTTTCTATATAAA",5,29.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I88F P161S",2
"lib1","SARS-CoV-2","AGTGTTTGGACTGGGA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82F K94F",2
"lib1","SARS-CoV-2","AGTGTTTTTAATGGCA",2,29.25,8.63,-2.13,0.36,1.5,1,0.07,"1 nonsynonymous","L95N",1
"lib1","SARS-CoV-2","AGTGTTTTTATAGTAT",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57F D98F T148S N157F",4
"lib1","SARS-CoV-2","AGTTAAAAAAAGGCTT",7,6.4,NA,NA,NA,NA,NA,NA,"stop","S19* Y39D R73* D98E G117S",5
"lib1","SARS-CoV-2","AGTTAAAACCATTGTT",1,16.42,10.41,-0.35,0.07,2.77,1.07,0,"1 nonsynonymous","G152V",1
"lib1","SARS-CoV-2","AGTTAAAAGAGAATAA",6,154.89,9.12,-1.65,0.07,2.79,1.13,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","AGTTAAAAGAGCTATA",3,0.76,NA,NA,NA,NA,NA,NA,"stop","A42R F62* N107W S129K",4
"lib1","SARS-CoV-2","AGTTAAAAGCGATCTA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","N1D A18*",2
"lib1","SARS-CoV-2","AGTTAAAAGTACCACC",6,99.45,9.38,-1.39,0.06,2.86,1.09,0,">1 nonsynonymous","R27V K87L G174W",3
"lib1","SARS-CoV-2","AGTTAAAATAGTCCCG",2,10.13,10.87,0.1,0.13,2.98,1,0,"1 nonsynonymous","T85H",1
"lib1","SARS-CoV-2","AGTTAAAATTGCCCTT",4,8.82,7.35,-3.42,0.58,1.5,1.11,0.06,">1 nonsynonymous","S41Y D68E L95M N118F D137Y T201F",6
"lib1","SARS-CoV-2","AGTTAAACAATTATGT",2,0.56,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","AGTTAAACCGTTGAAT",4,41.44,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19L F62Y W106T F126V",4
"lib1","SARS-CoV-2","AGTTAAACTTATGAGA",7,31.66,9.33,-1.43,0.27,1.5,1.05,0.03,">1 nonsynonymous","Y123K R136S I142T",3
"lib1","SARS-CoV-2","AGTTAAACTTTAAAGT",7,46.8,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y91W G101M G155S",3
"lib1","SARS-CoV-2","AGTTAAAGATCTAGAT",5,149.81,9.51,-1.26,0.1,2.14,1.1,0,">1 nonsynonymous","C6S V32I S139G P149V",4
"lib1","SARS-CoV-2","AGTTAAAGTTACTGTA",3,67.08,8.75,-2.01,0.07,2.7,1.11,0,">1 nonsynonymous","C6S T148S T170K",3
"lib1","SARS-CoV-2","AGTTAAATACATGTCC",7,24.81,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C6V S41K T85V F167T",4
"lib1","SARS-CoV-2","AGTTAAATATATAATA",5,80.98,10.77,0,0.07,2.88,1.08,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","AGTTAAATTAGACGTC",3,32.69,9.47,-1.29,0.12,2.67,1.12,0.01,">1 nonsynonymous","N110P Y119E",2
"lib1","SARS-CoV-2","AGTTAAATTGTATGAC",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130F G166S L183D",3
"lib1","SARS-CoV-2","AGTTAACAAACGATCG",15,52.66,6.2,-4.56,0.48,1.5,1.11,0.01,">1 nonsynonymous","A18G P96Y G116W",3
"lib1","SARS-CoV-2","AGTTAACAAGATCCAA",8,136.73,10.64,-0.12,0.06,2.93,1.03,0,">1 nonsynonymous","N4E T100S",2
"lib1","SARS-CoV-2","AGTTAACAATAGAGGT",2,17.27,9.94,-0.82,0.17,1.9,1.08,0.01,">1 nonsynonymous","I88T T201C",2
"lib1","SARS-CoV-2","AGTTAACAATTGTTCT",11,81.09,6,-4.76,2,3,1.25,0,">1 nonsynonymous","L5S D59G G172L",3
"lib1","SARS-CoV-2","AGTTAACACATCTTTA",14,181.66,6.27,-4.5,0.44,1.5,1.18,0.01,">1 nonsynonymous","S45T Y66E F99Q Y175M",4
"lib1","SARS-CoV-2","AGTTAACAGAATTAAT",4,77.19,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","A42Q R124S F160P Y178S",4
"lib1","SARS-CoV-2","AGTTAACATAAGTCCC",11,174.41,8,-2.76,0.23,1.5,1.11,0.02,">1 nonsynonymous","L5R N24T G83R D112Y K198M",5
"lib1","SARS-CoV-2","AGTTAACCACGTCATA",6,29.49,6,-4.76,2,1.5,1.41,0.07,">1 nonsynonymous","P54S A105P R136Q",3
"lib1","SARS-CoV-2","AGTTAACGTAAGTCAT",10,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A Q144T",2
"lib1","SARS-CoV-2","AGTTAACTCAGTCAAT",1,15.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A89Y L95S S147L",3
"lib1","SARS-CoV-2","AGTTAACTCGGAAAAT",5,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P Y121P Y175I S200M",4
"lib1","SARS-CoV-2","AGTTAACTTAAGCTAA",15,206.82,8.57,-2.2,0.13,2.2,1.1,0.01,">1 nonsynonymous","T3H L57V N120T",3
"lib1","SARS-CoV-2","AGTTAAGAACGCAAAA",4,21.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50R G86S",2
"lib1","SARS-CoV-2","AGTTAAGACCCAGCTG",2,35.6,10.9,0.14,0.09,2.8,1.1,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","AGTTAAGACTAGCCAA",6,38.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C S43L P133D E154Q",4
"lib1","SARS-CoV-2","AGTTAAGAGGTCTTTA",2,22.14,6.46,-4.3,0.52,1.5,1.11,0.02,">1 nonsynonymous","G101F Q144S G152V",3
"lib1","SARS-CoV-2","AGTTAAGAGTGTGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* V77E D90L",3
"lib1","SARS-CoV-2","AGTTAAGATAGAGGTA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","N1R E10* T85S N92Q P149L V181C",6
"lib1","SARS-CoV-2","AGTTAAGATATCACCA",7,78.99,10.52,-0.25,0.06,2.94,1.03,0,">1 nonsynonymous","P7L L111I L122Y",3
"lib1","SARS-CoV-2","AGTTAAGATTCTCTTA",2,46.05,10.79,0.03,0.12,2.74,1.15,0,">1 nonsynonymous","V37N A105S",2
"lib1","SARS-CoV-2","AGTTAAGCAGCCCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A14F R27T T85* L122K",4
"lib1","SARS-CoV-2","AGTTAAGCGATGGGCT",4,57.97,10.27,-0.5,0.05,2.8,1.01,0,">1 nonsynonymous","A89S E135A",2
"lib1","SARS-CoV-2","AGTTAAGCTAAAAATA",1,88.82,10.11,-0.66,0.03,2.84,1.05,0,">1 nonsynonymous","E10S T55K K94A",3
"lib1","SARS-CoV-2","AGTTAAGGACCAAAGC",3,24.76,10.25,-0.51,0.07,2.94,1,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","AGTTAAGGCTCCAGAT",7,27.61,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N13Y F134L F167N",3
"lib1","SARS-CoV-2","AGTTAAGGGAATGTAA",5,109.56,10.79,0.02,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTAAGTAACGCGGG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","I2M F8K Y39* W106S F185L",5
"lib1","SARS-CoV-2","AGTTAATAAAAGTGGA",2,42.13,8.74,-2.02,0.12,2.63,1,0,">1 nonsynonymous","A145S N157Y",2
"lib1","SARS-CoV-2","AGTTAATAAATAAGCC",6,24.27,10.84,0.07,0.07,2.97,1,0,"1 nonsynonymous","L5D",1
"lib1","SARS-CoV-2","AGTTAATATGAAAAAT",2,33.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5P A105K R124W E154W",4
"lib1","SARS-CoV-2","AGTTAATATGAACCCA",5,123.03,10.69,-0.08,0.06,2.89,1.07,0,"1 nonsynonymous","N120K",1
"lib1","SARS-CoV-2","AGTTAATCCAAGAAAT",3,41.91,8.64,-2.12,0.16,1.89,1.17,0.01,">1 nonsynonymous","K87P N107G S129L K198S",4
"lib1","SARS-CoV-2","AGTTAATCCGAAATGA",10,118.28,10.59,-0.18,0.05,2.9,1.04,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","AGTTAATGCGTGGGGA",1,15.16,10.72,-0.04,0.09,2.96,1.07,0,"1 nonsynonymous","V37N",1
"lib1","SARS-CoV-2","AGTTAATTTAAACGGA",1,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D S41V A67T",3
"lib1","SARS-CoV-2","AGTTACAAAAACAATA",2,62.61,9.91,-0.85,0.05,2.84,1.09,0,">1 nonsynonymous","G155R G174R",2
"lib1","SARS-CoV-2","AGTTACAAAATACGAT",2,10.94,10.66,-0.1,0.1,2.94,1,0,">1 nonsynonymous","I104L Y123L",2
"lib1","SARS-CoV-2","AGTTACAAGACCTTTT",11,230.67,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V11F S36C Q84N F99N P149S N157T",6
"lib1","SARS-CoV-2","AGTTACAAGCGAGTAG",4,31.99,10.81,0.04,0.09,2.87,1.04,0,">1 nonsynonymous","F44W D59S",2
"lib1","SARS-CoV-2","AGTTACAATGCTTATG",2,61.57,10.8,0.04,0.04,2.96,1.02,0,">1 nonsynonymous","I2F I142M",2
"lib1","SARS-CoV-2","AGTTACAATTTAACTG",4,43.06,10.66,-0.11,0.08,2.94,1,0,">1 nonsynonymous","T3R G9D A67C",3
"lib1","SARS-CoV-2","AGTTACACATGCAATA",6,56.37,10.7,-0.07,0.06,2.81,1.06,0,">1 nonsynonymous","S45T T55G E141N N151K",4
"lib1","SARS-CoV-2","AGTTACACCCGTTTGA",11,1.35,NA,NA,NA,NA,NA,NA,"stop","D59Y D98* P133R G166H",4
"lib1","SARS-CoV-2","AGTTACACGAACACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","R73* D90A L125D",3
"lib1","SARS-CoV-2","AGTTACACGCATACTA",3,90.6,7.95,-2.81,0.27,1.5,1.02,0.02,">1 nonsynonymous","N107T A145E F160S",3
"lib1","SARS-CoV-2","AGTTACAGACTTCCTG",4,25.99,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","G86L P96W K128M T148V C158M",5
"lib1","SARS-CoV-2","AGTTACAGATTACACG",4,74.13,10.6,-0.16,0.06,2.94,1.01,0,">1 nonsynonymous","L5T D98V S200V",3
"lib1","SARS-CoV-2","AGTTACAGCAAAGAAA",3,34.15,9.39,-1.38,0.15,1.5,1.09,0.01,">1 nonsynonymous","C102W T201H",2
"lib1","SARS-CoV-2","AGTTACATATTTGGAG",2,42.95,8.24,-2.52,0.19,1.5,1.11,0.01,">1 nonsynonymous","F12G S129P",2
"lib1","SARS-CoV-2","AGTTACATCACTCGCA",11,128.3,8.55,-2.22,0.14,1.75,1.13,0.01,">1 nonsynonymous","Y21Q Y35W N118M",3
"lib1","SARS-CoV-2","AGTTACATCAGCCCAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133M",1
"lib1","SARS-CoV-2","AGTTACCATAACAAAC",6,44.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G83I C158H",2
"lib1","SARS-CoV-2","AGTTACCCCGACATCG",6,71.6,8.22,-2.54,0.29,1.5,1.03,0.04,">1 nonsynonymous","L95H T148S",2
"lib1","SARS-CoV-2","AGTTACCCCGCTATAT",10,150.05,10.69,-0.07,0.07,2.86,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTTACCCGAAGAACA",17,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R A81T A105Y R179G",4
"lib1","SARS-CoV-2","AGTTACCCGTGCTGAA",15,85.61,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L38D N109H P161K",3
"lib1","SARS-CoV-2","AGTTACCCTCTGTACT",4,25.49,10.8,0.04,0.07,2.85,1.1,0,">1 nonsynonymous","S43I T148L",2
"lib1","SARS-CoV-2","AGTTACCGGCCCTCAA",2,15.01,9.79,-0.97,0.25,1.9,1.13,0.07,"1 nonsynonymous","Y66G",1
"lib1","SARS-CoV-2","AGTTACCTAAACAACC",3,21.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4K V71K Y121P K128L",4
"lib1","SARS-CoV-2","AGTTACGTTGAGAGTG",3,48.69,10.75,-0.01,0.11,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTACGTTGATTGCA",5,54,9.6,-1.17,0.13,1.76,1.07,0.01,">1 nonsynonymous","L5P T55V K94L",3
"lib1","SARS-CoV-2","AGTTACTAATGAAACA",3,18.42,6.09,-4.68,0.38,2.91,1.15,0,">1 nonsynonymous","R16L A22V G83V V103F",4
"lib1","SARS-CoV-2","AGTTACTACACATGTC",2,10.15,6.98,-3.78,0.47,1.5,1.41,0.05,">1 nonsynonymous","G51F D90H",2
"lib1","SARS-CoV-2","AGTTACTACTTTAGAT",9,60.2,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y91L D97P W106D",3
"lib1","SARS-CoV-2","AGTTACTATTATCGAA",3,2.24,NA,NA,NA,NA,NA,NA,"stop","I28L L38* L60V D68M V77E Y91H",6
"lib1","SARS-CoV-2","AGTTACTATTCGAGAG",2,58.92,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","A105E T201K",2
"lib1","SARS-CoV-2","AGTTACTGCGGGCGAA",7,135.76,10.66,-0.11,0.06,2.91,1,0,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","AGTTACTTGATGAGAA",1,69.57,10.74,-0.03,0.08,2.93,1.05,0,"1 nonsynonymous","E186Q",1
"lib1","SARS-CoV-2","AGTTAGAACCACGACG",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87F L183P",2
"lib1","SARS-CoV-2","AGTTAGAATACAAACG",2,11.54,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","V77E I104T T170L",3
"lib1","SARS-CoV-2","AGTTAGACCCAGACAT",3,70.12,10.74,-0.03,0.09,2.95,1.03,0,">1 nonsynonymous","N40T K56T N130R",3
"lib1","SARS-CoV-2","AGTTAGACCTTTGCCT",1,7.78,10.85,0.08,0.08,3,1,0,"1 nonsynonymous","R27V",1
"lib1","SARS-CoV-2","AGTTAGACTAAAAAAG",4,0.25,NA,NA,NA,NA,NA,NA,"stop","F8N P133Q Q144*",3
"lib1","SARS-CoV-2","AGTTAGATTTACACAG",6,47.18,9.39,-1.37,0.16,1.54,1.2,0.01,">1 nonsynonymous","C49T T148N",2
"lib1","SARS-CoV-2","AGTTAGCACAGAGTAA",5,103.81,10.8,0.04,0.07,2.94,1.02,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","AGTTAGCAGACTTGCT",1,34.1,10.13,-0.63,0.1,2.66,1.03,0,">1 nonsynonymous","S45Q A89C F160R",3
"lib1","SARS-CoV-2","AGTTAGCAGCGAAGGA",4,70.49,10.82,0.05,0.05,2.91,1.04,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","AGTTAGGACAATTGAA",3,17.74,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","C61I V77L L95A P149S",4
"lib1","SARS-CoV-2","AGTTAGGAGGAGTCAG",5,125.5,10.73,-0.03,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTAGGGAAATTTTG",1,32.88,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C31S S113D Q168R",3
"lib1","SARS-CoV-2","AGTTAGTAATATCAGC",2,23,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","L38M V77E V103D G152M T201A",5
"lib1","SARS-CoV-2","AGTTAGTACTGTGACG",2,10.22,6,-4.76,2,3,1.09,0,">1 nonsynonymous","R73W G86R T170V P191L",4
"lib1","SARS-CoV-2","AGTTAGTAGACCCTCT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C61* P82T",2
"lib1","SARS-CoV-2","AGTTAGTCTGAAAGTC",3,88.18,10.13,-0.63,0.07,2.71,1.03,0,">1 nonsynonymous","L5V S108V",2
"lib1","SARS-CoV-2","AGTTAGTTTTTGAAAC",3,6.9,NA,NA,NA,NA,NA,NA,"stop","T46* G116S L122F",3
"lib1","SARS-CoV-2","AGTTATAAAATTACAG",3,35.51,10.17,-0.6,0.08,2.76,1.01,0,">1 nonsynonymous","T46S D90E S139Q A192D P197H",5
"lib1","SARS-CoV-2","AGTTATAAACGCCCAC",5,34.44,6.94,-3.82,0.5,1.5,1.24,0.05,">1 nonsynonymous","I88M P96Q R136H",3
"lib1","SARS-CoV-2","AGTTATAAAGACAGCA",3,78.11,9.63,-1.13,0.04,2.86,1.05,0,">1 nonsynonymous","A18T F156T",2
"lib1","SARS-CoV-2","AGTTATAATAACCAAA",3,53.97,7.39,-3.38,0.48,1.5,1.16,0.06,">1 nonsynonymous","W23G I80N Q84F",3
"lib1","SARS-CoV-2","AGTTATAATAATCGTG",6,85.67,10.73,-0.03,0.07,2.8,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTATACAGCAAAAA",3,24.45,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V71L Q144R Y165N G172C",4
"lib1","SARS-CoV-2","AGTTATACGAAGGGTT",3,77.01,8.45,-2.32,0.15,2.49,1.1,0.01,">1 nonsynonymous","G9K T46F A145Y",3
"lib1","SARS-CoV-2","AGTTATAGCTAACGGG",8,77.3,7.03,-3.74,0.2,1.71,1.18,0.01,">1 nonsynonymous","K128C G146V",2
"lib1","SARS-CoV-2","AGTTATATAAATTAGC",1,8.01,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","R16P C31R D68P E141D",4
"lib1","SARS-CoV-2","AGTTATATTAGCATGC",2,13.55,10.41,-0.36,0.1,2.93,1.11,0.01,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","AGTTATCAGAAAGAGG",10,24.03,6.55,-4.21,0.44,1.5,1.09,0.03,">1 nonsynonymous","F8R S129P C158W",3
"lib1","SARS-CoV-2","AGTTATCCAATAAACG",5,34.68,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C102Y R136V",2
"lib1","SARS-CoV-2","AGTTATCGACTGCTAG",4,75.45,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41D Y119L F126H C158F",4
"lib1","SARS-CoV-2","AGTTATCGCGCCCGCG",1,11.72,9.6,-1.17,0.11,2.83,1.09,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","AGTTATCGTGAACATG",3,23.43,9.67,-1.1,0.13,2.51,1.04,0.01,">1 nonsynonymous","T63W V115L F134N",3
"lib1","SARS-CoV-2","AGTTATCTAGTTAAAT",2,51.31,10.24,-0.53,0.04,2.89,1.01,0,">1 nonsynonymous","F12L L125F T201E",3
"lib1","SARS-CoV-2","AGTTATCTGGCAATAA",5,14.49,7.54,-3.22,0.14,1.5,1.04,0.01,">1 nonsynonymous","K87Y F99V N107S",3
"lib1","SARS-CoV-2","AGTTATCTTCAATACA",2,10.4,10.75,-0.01,0.12,2.98,1,0,">1 nonsynonymous","T3Y G174S",2
"lib1","SARS-CoV-2","AGTTATGAAGGTTTAC",5,15.03,10.07,-0.69,0.25,1.53,1.1,0.03,">1 nonsynonymous","P82T N171Y G196C",3
"lib1","SARS-CoV-2","AGTTATGAGAGAGGGA",1,21.16,10.9,0.14,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTATGATTAATAGT",6,47.21,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D90C S113L I138W N151S",4
"lib1","SARS-CoV-2","AGTTATGTGAGATCTA",2,62.51,10.68,-0.09,0.05,2.97,1,0,">1 nonsynonymous","S36R S184V",2
"lib1","SARS-CoV-2","AGTTATTACCATCCCT",1,123.18,11.05,0.28,0.06,2.91,1.05,0,"1 nonsynonymous","Y123F",1
"lib1","SARS-CoV-2","AGTTATTAGACAGGGG",7,171.15,10.19,-0.58,0.04,2.92,1,0,">1 nonsynonymous","P7H A22H T140M Q168R",4
"lib1","SARS-CoV-2","AGTTATTATAGATACA",6,1.46,NA,NA,NA,NA,NA,NA,"stop","R136* Q144I V173T",3
"lib1","SARS-CoV-2","AGTTATTATCTAATCT",5,92.43,10.61,-0.15,0.06,2.89,1.01,0,"1 nonsynonymous","K87V",1
"lib1","SARS-CoV-2","AGTTATTCAGGACCTC",3,64.89,9.59,-1.18,0.07,2.78,1.05,0,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","AGTTATTCATACAAAT",3,54.01,10.84,0.08,0.06,2.89,1,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTATTCCAAAGATA",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S N151K G166K",3
"lib1","SARS-CoV-2","AGTTATTTAAAAACAA",3,39.92,10.89,0.12,0.08,2.89,1.06,0,"1 nonsynonymous","V173K",1
"lib1","SARS-CoV-2","AGTTATTTAATAAGAC",1,56.5,10.61,-0.15,0.06,2.84,1.08,0,"1 nonsynonymous","I28V",1
"lib1","SARS-CoV-2","AGTTATTTAGGAGTTC",3,60.71,10.83,0.07,0.09,2.83,1.09,0,"1 nonsynonymous","N120D",1
"lib1","SARS-CoV-2","AGTTCAAAACTGTTAT",7,2.85,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib1","SARS-CoV-2","AGTTCAAAATAAAAAA",2,9.23,9.24,-1.53,0.32,1.5,1.13,0.06,">1 nonsynonymous","N30W F185S",2
"lib1","SARS-CoV-2","AGTTCAAAGCCTGGTA",3,41.09,10.84,0.08,0.09,2.94,1.01,0,"1 nonsynonymous","S36V",1
"lib1","SARS-CoV-2","AGTTCAAATATATGAG",1,7.56,6.36,-4.41,0.57,3,1.43,0.02,">1 nonsynonymous","C61G V103K",2
"lib1","SARS-CoV-2","AGTTCAAATGATAAAG",12,41.31,6.47,-4.29,0.45,1.5,1.17,0.01,">1 nonsynonymous","F17T V52R N58E D97H K199M",5
"lib1","SARS-CoV-2","AGTTCAAGTTAAGATA",6,80.64,10.19,-0.57,0.06,2.78,1,0,">1 nonsynonymous","C6V S41T",2
"lib1","SARS-CoV-2","AGTTCAATAGGAACAA",2,1.44,NA,NA,NA,NA,NA,NA,"stop","V103* V153R P161L K199L",4
"lib1","SARS-CoV-2","AGTTCAATGAATCGAA",2,10.3,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","L5V F12S A81T G152V F160T",5
"lib1","SARS-CoV-2","AGTTCAATTCTGCAAT",2,20.58,10.71,-0.05,0.12,2.93,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","AGTTCACAAATGAAAA",7,1.37,NA,NA,NA,NA,NA,NA,"stop","S36* C61H Y91M C102N Y121* N157H Q176S",7
"lib1","SARS-CoV-2","AGTTCACAATAACGGT",4,82.3,10.76,-0.01,0.07,2.89,1.05,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","AGTTCACAATGCAAAT",1,7.67,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","D34L A67S R73L S147Y Q176F",5
"lib1","SARS-CoV-2","AGTTCACCGATTATTC",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C N120V N130H T148N",4
"lib1","SARS-CoV-2","AGTTCACGGAATGGCG",8,18.47,7.51,-3.25,0.29,1.5,1.1,0.03,">1 nonsynonymous","D112A N130L",2
"lib1","SARS-CoV-2","AGTTCACGGACAATAT",6,2.14,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","AGTTCACTACACGATA",1,7.17,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14T P96F Y123A",3
"lib1","SARS-CoV-2","AGTTCACTTGTTGAAA",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T V71E E135K S147R",4
"lib1","SARS-CoV-2","AGTTCAGCCCTGGTAG",4,135.23,10.7,-0.07,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTCAGCTAATCAGT",6,103.84,10.38,-0.38,0.03,2.82,1.08,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","AGTTCAGGGTTTAAAG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","A89Q K114T Q176*",3
"lib1","SARS-CoV-2","AGTTCAGTATGTAATA",3,45.2,10.22,-0.55,0.03,2.91,1.04,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","AGTTCATAACAAGAAA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D G101F I138Q G155V L188S",5
"lib1","SARS-CoV-2","AGTTCATCAATCCGCA",1,5.04,10.51,-0.26,0.15,2.98,1,0.01,">1 nonsynonymous","T3A S43N",2
"lib1","SARS-CoV-2","AGTTCATCTGGACGAC",11,7.91,8.26,-2.5,0.36,1.5,1.07,0.06,">1 nonsynonymous","K94G L122M E186L",3
"lib1","SARS-CoV-2","AGTTCATGAGGACTTA",10,112.23,10.36,-0.41,0.02,2.86,1.06,0,">1 nonsynonymous","L60F G83S",2
"lib1","SARS-CoV-2","AGTTCATGTTTATAAG",4,54.03,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9H Y35A T46K G86V",4
"lib1","SARS-CoV-2","AGTTCCAAAAGCAACA",4,159.92,8.1,-2.67,0.4,1.5,1,0.07,">1 nonsynonymous","A33S F99N D112E",3
"lib1","SARS-CoV-2","AGTTCCAACATCATTT",3,26.33,10.6,-0.16,0.09,2.86,1.05,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","AGTTCCAGAAAGCCAT",5,56.09,6.65,-4.11,0.41,1.5,1.13,0.03,">1 nonsynonymous","N4Q D97T N107I S129R T140E T170P",6
"lib1","SARS-CoV-2","AGTTCCATGTTAGAAA",2,53.15,10.89,0.13,0.06,2.9,1.02,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","AGTTCCATTACGAGTT",1,14.58,10.58,-0.19,0.1,2.95,1.02,0,">1 nonsynonymous","Y123S T140K",2
"lib1","SARS-CoV-2","AGTTCCCAGAGAAAAA",13,66.74,6,-4.76,0.92,1.5,1.15,0.01,">1 nonsynonymous","V20R F70P G83S T100I Y123N K198R",6
"lib1","SARS-CoV-2","AGTTCCGAAATTATCT",6,171.04,10.14,-0.62,0.03,2.85,1.05,0,"1 nonsynonymous","G174E",1
"lib1","SARS-CoV-2","AGTTCCGAATAGGGTT",7,3.93,NA,NA,NA,NA,NA,NA,"stop","V37K Q176* R179M",3
"lib1","SARS-CoV-2","AGTTCCGCCATCTTAA",3,113.13,6.26,-4.5,0.41,1.5,1.18,0.01,">1 nonsynonymous","F8N G116D G146E",3
"lib1","SARS-CoV-2","AGTTCCGCTTAAAGAC",2,24.7,10.11,-0.66,0.08,2.8,1.01,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","AGTTCCTAGCTAAAAA",4,29.45,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","F70L K94E",2
"lib1","SARS-CoV-2","AGTTCCTATGCTGCCC",3,43.93,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50C P133E A192E",3
"lib1","SARS-CoV-2","AGTTCCTCCAAGACTG",5,50.8,9.06,-1.7,0.2,1.5,1.1,0.02,">1 nonsynonymous","G83Y V115S L131F",3
"lib1","SARS-CoV-2","AGTTCCTGGGCAACCT",2,1472.72,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","C6K V37E D112T Y121G",4
"lib1","SARS-CoV-2","AGTTCCTTCCCCACGA",3,90.16,10,-0.77,0.09,2.13,1.06,0,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","AGTTCCTTTAACTCGA",8,45.02,6,-4.76,1.17,1.5,1.17,0.02,">1 nonsynonymous","N1Q L38S E141H P177C",4
"lib1","SARS-CoV-2","AGTTCCTTTTAAAGAA",3,27.45,8.56,-2.2,0.15,2.79,1.06,0.01,">1 nonsynonymous","T100I G116E K132V Y159L",4
"lib1","SARS-CoV-2","AGTTCGAACAAAGAAC",2,19.09,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","G86K F99L",2
"lib1","SARS-CoV-2","AGTTCGACTAGAAACT",7,37.97,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","W106P Y165F",2
"lib1","SARS-CoV-2","AGTTCGAGCCAATAAA",1,1.08,NA,NA,NA,NA,NA,NA,"stop","C61* N92I K128M",3
"lib1","SARS-CoV-2","AGTTCGCGGGTACGTC",2,69.94,10.46,-0.3,0.08,2.93,1.02,0,">1 nonsynonymous","E10T V37D",2
"lib1","SARS-CoV-2","AGTTCGCTTACATCTA",6,39.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25S T63S W106M N109S",4
"lib1","SARS-CoV-2","AGTTCGGAAGAAAATT",2,1.46,NA,NA,NA,NA,NA,NA,"stop","F62* G146F",2
"lib1","SARS-CoV-2","AGTTCGTACTCACTAA",2,19.24,9.24,-1.53,0.32,1.5,1,0.04,">1 nonsynonymous","V11C Y35R Q144A",3
"lib1","SARS-CoV-2","AGTTCGTTGAACAACT",5,5.65,NA,NA,NA,NA,NA,NA,"stop","F99Y K114R Y119* Y175Q",4
"lib1","SARS-CoV-2","AGTTCGTTGATTCACA",2,21.52,9.61,-1.16,0.24,1.55,1.15,0.03,">1 nonsynonymous","Y50K K56S",2
"lib1","SARS-CoV-2","AGTTCGTTGTACCCAC",3,92.16,10.18,-0.59,0.1,2.34,1.01,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","AGTTCGTTGTTGGTGC",4,50.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P7H D90N K94W W106C",4
"lib1","SARS-CoV-2","AGTTCTAGAGTAGAGA",5,62.15,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1K C6V A14T I28F T148S N171K Y178P",7
"lib1","SARS-CoV-2","AGTTCTAGTAGCCCCA",4,21.18,6.96,-3.81,0.58,1.5,1.11,0.07,">1 nonsynonymous","R16I D59M R179M",3
"lib1","SARS-CoV-2","AGTTCTATCTCAATCA",3,12.77,8.25,-2.52,0.16,2.37,1.11,0.01,">1 nonsynonymous","G9E C31I Y39N R73S",4
"lib1","SARS-CoV-2","AGTTCTATTGATAAGG",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L D97T D112R",3
"lib1","SARS-CoV-2","AGTTCTCGTAAATCAA",1,11.97,6.12,-4.64,1.85,1.5,1.27,0.05,">1 nonsynonymous","G51Q A89T W106Y",3
"lib1","SARS-CoV-2","AGTTCTCTATTGAGCA",2,13.39,6,-4.76,2,3,1.13,0,">1 nonsynonymous","L38P F99T T140L G174M",4
"lib1","SARS-CoV-2","AGTTCTGCGAAAAAAG",3,35.24,9.43,-1.34,0.08,2.87,1.11,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","AGTTCTGCGAAAAATG",3,28.64,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F44Y T63A Y159S",3
"lib1","SARS-CoV-2","AGTTCTGCGGTCTCAG",1,4.87,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","AGTTCTGTCTGAAACG",5,32.73,6.57,-4.19,0.67,1.5,1.14,0.05,">1 nonsynonymous","V11L Y93K D97G N120D T140A",5
"lib1","SARS-CoV-2","AGTTCTTCTGGAAATT",11,61.99,6.34,-4.42,0.77,1.5,1.24,0.04,">1 nonsynonymous","S19K C61Y T85G Q144I E154S",5
"lib1","SARS-CoV-2","AGTTCTTTAGGGTGAA",1,87.23,9.94,-0.82,0.07,2.4,1,0,">1 nonsynonymous","D34Y T63G",2
"lib1","SARS-CoV-2","AGTTCTTTCAAAGGTA",5,70.43,10.62,-0.14,0.05,2.94,1,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","AGTTCTTTTTATACCC",1,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","AGTTGAAAAAACAATT",1,32.17,9.16,-1.61,0.16,1.51,1.07,0.01,">1 nonsynonymous","N4V A14L V103I K198R",4
"lib1","SARS-CoV-2","AGTTGAAAAAACATCT",3,94.14,8.7,-2.06,0.11,2.68,1.06,0.01,">1 nonsynonymous","N1K N107S L125R",3
"lib1","SARS-CoV-2","AGTTGAAAAGGCGGAA",6,81.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F47Y Y66A K87L Q168P",4
"lib1","SARS-CoV-2","AGTTGAAAGGGAAATA",3,66.66,10.56,-0.21,0.04,2.95,1,0,">1 nonsynonymous","S45T S129H H189Y",3
"lib1","SARS-CoV-2","AGTTGAAATCATCAAA",3,0.89,NA,NA,NA,NA,NA,NA,"stop","S19R T85K S129L T170* Y175D E186S",6
"lib1","SARS-CoV-2","AGTTGAAATTTTCTGT",8,2.3,NA,NA,NA,NA,NA,NA,"stop","S53C E154* Y165I",3
"lib1","SARS-CoV-2","AGTTGAACAGTCTAAA",12,92.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49S D75I",2
"lib1","SARS-CoV-2","AGTTGAACGATTGCTG",3,65.26,10.72,-0.04,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTGAACGGTAACAC",6,156.77,10.08,-0.68,0.08,2.68,1.01,0,">1 nonsynonymous","S29E S36Y N130S V153D",4
"lib1","SARS-CoV-2","AGTTGACAGATTATAA",1,78.58,9.78,-0.98,0.14,2.1,1.1,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","AGTTGACCCACACATG",8,111.82,10.55,-0.21,0.06,2.9,1,0,">1 nonsynonymous","A33H V37L",2
"lib1","SARS-CoV-2","AGTTGACCTATCTAGG",4,6.74,NA,NA,NA,NA,NA,NA,"stop","N64D F160*",2
"lib1","SARS-CoV-2","AGTTGACGTCAATATG",3,26.77,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L5Y V11W G74V L122E Y143I",5
"lib1","SARS-CoV-2","AGTTGAGAAGCTACCA",1,42.21,8.78,-1.98,0.14,1.88,1.16,0.01,">1 nonsynonymous","G9L V52A I142P",3
"lib1","SARS-CoV-2","AGTTGAGCCATTCTGC",15,321.43,10.67,-0.09,0.04,2.94,1.05,0,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","AGTTGAGGGAGCATGA",2,10.03,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N1L G86C F134I",3
"lib1","SARS-CoV-2","AGTTGAGGTGCGTAAG",1,6.47,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","F8L I104V R124I",3
"lib1","SARS-CoV-2","AGTTGAGTAATCAACC",1,11.64,10.16,-0.6,0.14,2.32,1,0.01,">1 nonsynonymous","Y39N N92S",2
"lib1","SARS-CoV-2","AGTTGAGTCACGAAAT",1,25.28,10.93,0.16,0.08,2.89,1,0,">1 nonsynonymous","T3W F160N T201I",3
"lib1","SARS-CoV-2","AGTTGAGTTAATGCAT",2,55.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87Q G101C N107P Y178W T201S",5
"lib1","SARS-CoV-2","AGTTGATAATATCCCC",1,26.02,10.3,-0.47,0.05,2.95,1.02,0,"1 nonsynonymous","Q168N",1
"lib1","SARS-CoV-2","AGTTGATACAGTTTTA",1,16.77,9.81,-0.95,0.12,2.56,1.06,0.01,">1 nonsynonymous","T55A D90A K128R I142F",4
"lib1","SARS-CoV-2","AGTTGATGGTAACAAT",7,187.6,10.13,-0.64,0.09,2.54,1.02,0,"1 nonsynonymous","P96H",1
"lib1","SARS-CoV-2","AGTTGCAATCATCAAT",1,8.18,9.89,-0.87,0.09,2.73,1.09,0,">1 nonsynonymous","V32M P133H",2
"lib1","SARS-CoV-2","AGTTGCAATCGAGAAA",8,32.63,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A14G I80A I138V G174V",4
"lib1","SARS-CoV-2","AGTTGCAATCTTAGCT",6,85.27,10.27,-0.49,0.05,2.87,1,0,">1 nonsynonymous","S45L I138T S200Q",3
"lib1","SARS-CoV-2","AGTTGCAATGTGCATT",14,93.45,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N64Y A89K T170I",3
"lib1","SARS-CoV-2","AGTTGCAGTTGAAATG",2,52.11,10.68,-0.09,0.05,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTGCATACATGGAA",1,5.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A S139C F167V",3
"lib1","SARS-CoV-2","AGTTGCATCCAATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90I Y143*",2
"lib1","SARS-CoV-2","AGTTGCCCCCTGTTTG",4,16.85,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T55L P82Y S139K C150N",4
"lib1","SARS-CoV-2","AGTTGCCCGGATTAGG",1,41.77,10.52,-0.24,0.04,2.89,1,0,">1 nonsynonymous","F44I Q168R",2
"lib1","SARS-CoV-2","AGTTGCCGATTAGAGA",2,24.59,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I28D C49V P54K G86S A105S N151C",6
"lib1","SARS-CoV-2","AGTTGCGGCAAACTAA",5,1.22,NA,NA,NA,NA,NA,NA,"stop","K56C S129P T140* G155R",4
"lib1","SARS-CoV-2","AGTTGCGTGCCAGTCG",2,9.82,10.36,-0.4,0.41,1.53,1.02,0.06,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","AGTTGCTTATCTTAGT",4,1.16,NA,NA,NA,NA,NA,NA,"stop","Y35R T100* G174R",3
"lib1","SARS-CoV-2","AGTTGCTTTAAAGCAG",2,12.57,10.24,-0.53,0.12,2.91,1.07,0.01,">1 nonsynonymous","L5A F156V",2
"lib1","SARS-CoV-2","AGTTGGAGTCATGCGG",13,112.09,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V71E G117M T201D",3
"lib1","SARS-CoV-2","AGTTGGAGTGAAAAGT",3,56.16,10.8,0.04,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTGGATACCGTTGA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","G86T P96K N151C S164Y F167*",5
"lib1","SARS-CoV-2","AGTTGGATCAAAATAG",6,21.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K W106A S139T",3
"lib1","SARS-CoV-2","AGTTGGATCTTCTGAA",9,90.8,10.69,-0.07,0.08,2.91,1.03,0,">1 nonsynonymous","L5V G152S",2
"lib1","SARS-CoV-2","AGTTGGATTAGCCAGC",6,20.75,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9R S41D N92V T201L",4
"lib1","SARS-CoV-2","AGTTGGCCAGACCAAG",4,0.84,NA,NA,NA,NA,NA,NA,"stop","N4* V77E Y123V S147T",4
"lib1","SARS-CoV-2","AGTTGGCTAGGGCATT",3,20.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40V F134S N171R",3
"lib1","SARS-CoV-2","AGTTGGCTATACTCCG",3,32.76,9.63,-1.14,0.11,1.95,1.08,0,">1 nonsynonymous","C49W D97K E141F",3
"lib1","SARS-CoV-2","AGTTGGGAGCAGGGAT",2,17.42,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K56Q N92Y",2
"lib1","SARS-CoV-2","AGTTGGGCTGCCCGAA",4,1.81,NA,NA,NA,NA,NA,NA,"stop","I2V D90F P133S N157*",4
"lib1","SARS-CoV-2","AGTTGGGGGGACTAAA",4,65.79,10.68,-0.08,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTGGTCATCTATTA",1,68.47,10.22,-0.54,0.03,2.89,1,0,">1 nonsynonymous","L60T A67C Y91F",3
"lib1","SARS-CoV-2","AGTTGGTTCCAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91L L122* S184T",3
"lib1","SARS-CoV-2","AGTTGGTTTAACCGAA",7,86.27,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5K L38Q R124C",3
"lib1","SARS-CoV-2","AGTTGTACTGTAGCAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","A33* L162V",2
"lib1","SARS-CoV-2","AGTTGTAGTATTCATA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib1","SARS-CoV-2","AGTTGTATAACGTGGA",5,102.93,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C61R P96R N118A G172D",4
"lib1","SARS-CoV-2","AGTTGTATACTCAACT",2,0.64,NA,NA,NA,NA,NA,NA,"stop","E10L S45Y D97*",3
"lib1","SARS-CoV-2","AGTTGTCCAAAATTAC",2,2.43,NA,NA,NA,NA,NA,NA,"stop","N13G L38C T55F E76L K94D P149* C158L",7
"lib1","SARS-CoV-2","AGTTGTCCAAAGTTAG",11,101.77,8.94,-1.82,0.16,1.5,1.2,0.01,"1 nonsynonymous","F17K",1
"lib1","SARS-CoV-2","AGTTGTCGTAGTCAGT",1,23.26,9.21,-1.55,0.23,1.6,1.24,0.03,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","AGTTGTCTATCTTAAC",15,52.81,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86H V182C",2
"lib1","SARS-CoV-2","AGTTGTCTTAACTTTG",4,54.51,10.9,0.14,0.06,2.96,1,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","AGTTGTGATAAGAAAC",6,54.03,10.67,-0.1,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTGTGCATTTATAG",1,5.39,10.65,-0.12,0.12,2.97,1,0,">1 nonsynonymous","A14G P197R",2
"lib1","SARS-CoV-2","AGTTGTGTCTAACGCA",5,57.52,10.31,-0.45,0.07,2.92,1,0,">1 nonsynonymous","F44D T55V",2
"lib1","SARS-CoV-2","AGTTGTTACAAGGTCA",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63N G101N S113M F167I T201I",5
"lib1","SARS-CoV-2","AGTTGTTAGGCCAATA",6,14.17,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L183E G196S",2
"lib1","SARS-CoV-2","AGTTGTTCATCATCAA",8,11.07,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3E N13I A33P K94V T148K P161S",6
"lib1","SARS-CoV-2","AGTTGTTCCTGTACTA",12,230.54,9.48,-1.28,0.08,2.28,1.08,0,">1 nonsynonymous","C6Q A42E L60H Q163R",4
"lib1","SARS-CoV-2","AGTTGTTTAAAAGACG",1,9.56,9.98,-0.79,0.29,1.65,1.05,0.01,">1 nonsynonymous","D59E G86R Q163V",3
"lib1","SARS-CoV-2","AGTTGTTTCACGAAGG",9,96.45,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19L V77E D97L R127L Q163E",5
"lib1","SARS-CoV-2","AGTTTAACAAAACTAC",4,27.62,7.11,-3.66,0.22,1.5,1.06,0.01,">1 nonsynonymous","F47M G86L",2
"lib1","SARS-CoV-2","AGTTTAACGGCGATTA",4,22.38,10,-0.76,0.15,2.66,1,0.01,"1 nonsynonymous","R25S",1
"lib1","SARS-CoV-2","AGTTTAAGCGGACACC",1,27.68,9.62,-1.15,0.2,2.58,1.05,0.01,">1 nonsynonymous","N58Q K87I L95T",3
"lib1","SARS-CoV-2","AGTTTAAGTGTTCTTC",6,220.1,8.01,-2.76,0.15,1.94,1.11,0.01,">1 nonsynonymous","I2R T100N S113I",3
"lib1","SARS-CoV-2","AGTTTAATAGTAAAGT",4,16.71,10.63,-0.13,0.08,2.91,1.05,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","AGTTTAATGGTCAATG",4,113.21,10.78,0.02,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTTAATTGTTTATT",3,23.42,10.92,0.16,0.12,2.85,1.04,0,">1 nonsynonymous","T100M T201M",2
"lib1","SARS-CoV-2","AGTTTAATTTCTCCCA",4,20.51,6.03,-4.73,0.84,1.5,1.18,0.01,">1 nonsynonymous","E141A P161L",2
"lib1","SARS-CoV-2","AGTTTACAACGTCCCG",2,0.22,NA,NA,NA,NA,NA,NA,"stop","F12* P96M P161M",3
"lib1","SARS-CoV-2","AGTTTACAAGATTAAA",9,183.63,10.61,-0.16,0.05,2.9,1.03,0,">1 nonsynonymous","P96S S200D",2
"lib1","SARS-CoV-2","AGTTTACAGAATACCG",5,14.53,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","N13Y S53R V103L S164R H189Y",5
"lib1","SARS-CoV-2","AGTTTACCAAGTAAGC",3,26.45,9.03,-1.74,0.25,1.87,1.14,0.03,">1 nonsynonymous","Q84F D90K",2
"lib1","SARS-CoV-2","AGTTTACCCTTAGTTA",3,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I W23L V65L P133T P169V V173K",6
"lib1","SARS-CoV-2","AGTTTACTCTAGGGCT",12,97.56,6,-4.76,1.78,1.5,1.2,0.01,">1 nonsynonymous","K94G T100F G117R",3
"lib1","SARS-CoV-2","AGTTTACTCTAGTATG",1,0.41,NA,NA,NA,NA,NA,NA,"stop","S19T A42* F99T R127T P161*",5
"lib1","SARS-CoV-2","AGTTTACTGTGAATCC",8,200.71,6.55,-4.21,0.3,1.5,1.15,0.01,">1 nonsynonymous","C61R N109S Q176D",3
"lib1","SARS-CoV-2","AGTTTAGAATCGTGGA",12,64.23,10.05,-0.71,0.1,2.39,1.01,0,">1 nonsynonymous","V103T T201P",2
"lib1","SARS-CoV-2","AGTTTAGAATGAGATG",1,24.42,10.74,-0.02,0.08,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTTAGACAAGTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43F Y91F D97* Q168R Y178I",5
"lib1","SARS-CoV-2","AGTTTAGACACTGACA",1,3.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","AGTTTAGCATAACCTT",1,14.29,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A89K C102V Y143I",3
"lib1","SARS-CoV-2","AGTTTAGGTCATTCCT",2,38.61,10.75,-0.02,0.08,2.87,1.07,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","AGTTTAGTGAACACAA",1,35.34,6,-4.76,1.73,1.5,1.12,0.01,">1 nonsynonymous","F8L Y35C N58H T85V D90T G101I R127A T140E",8
"lib1","SARS-CoV-2","AGTTTATAAAAAAGTT",3,30.68,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S41V C49A N64D K94A Y119M R127K G146C L187S",8
"lib1","SARS-CoV-2","AGTTTATAAATAAAAA",7,122.65,10.68,-0.09,0.05,2.92,1.04,0,"1 nonsynonymous","S53R",1
"lib1","SARS-CoV-2","AGTTTATAGACGTTTA",1,20.81,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","A67S V115E R124Y T148Q G152V P177Y",6
"lib1","SARS-CoV-2","AGTTTATAGTCGCGTT",4,54.15,10.08,-0.69,0.07,2.73,1.06,0,"1 nonsynonymous","C31G",1
"lib1","SARS-CoV-2","AGTTTATCCCAGCGCA",2,110.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37M T55I A67L P161I",4
"lib1","SARS-CoV-2","AGTTTATGTCGAGAAT",7,88.31,9.87,-0.89,0.1,1.83,1.06,0,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","AGTTTATTATACACGC",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A V20L R25E A145V",4
"lib1","SARS-CoV-2","AGTTTATTTGCCCCGT",3,87.7,10.71,-0.06,0.04,2.94,1.04,0,">1 nonsynonymous","L5V Q84S",2
"lib1","SARS-CoV-2","AGTTTCAAAAATCAAA",3,42.31,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C61F D90G D97F Y123K F167G",5
"lib1","SARS-CoV-2","AGTTTCAAGACGAACG",8,166.72,9.83,-0.93,0.03,2.89,1.05,0,">1 nonsynonymous","L95I Y119K",2
"lib1","SARS-CoV-2","AGTTTCAATGACACGT",4,29.16,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D59L I80L C150F",3
"lib1","SARS-CoV-2","AGTTTCACTTTTGCTA",4,50.28,9.65,-1.12,0.05,1.9,1.05,0,">1 nonsynonymous","I2F A33G F185A",3
"lib1","SARS-CoV-2","AGTTTCAGATGCTTAT",8,134.75,8.59,-2.17,0.09,2.39,1.07,0,">1 nonsynonymous","N13L T63A Y119Q",3
"lib1","SARS-CoV-2","AGTTTCAGTAAACAAA",4,28.6,9.24,-1.52,0.12,1.97,1.07,0.01,"1 nonsynonymous","Y91D",1
"lib1","SARS-CoV-2","AGTTTCATAGGATTGG",3,46.28,10.82,0.06,0.1,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTTCCACTAACGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12W I72*",2
"lib1","SARS-CoV-2","AGTTTCCAGTGTATCC",4,77.92,10.56,-0.2,0.05,2.87,1.09,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","AGTTTCCATAACCTTT",4,40.44,10.23,-0.54,0.11,2.66,1.12,0.01,"1 nonsynonymous","E135V",1
"lib1","SARS-CoV-2","AGTTTCCCCAAATCCT",3,78.36,10.5,-0.27,0.04,2.9,1.05,0,">1 nonsynonymous","S29L N64V",2
"lib1","SARS-CoV-2","AGTTTCCCCAACCGAG",4,115.47,10.57,-0.19,0.04,2.87,1.05,0,">1 nonsynonymous","V37N N120L",2
"lib1","SARS-CoV-2","AGTTTCCCTCTTAAAC",1,16.2,8.61,-2.15,0.25,1.96,1.27,0.03,">1 nonsynonymous","N13T Y91L P149R Y175H",4
"lib1","SARS-CoV-2","AGTTTCCTTTCCTGAG",5,64.1,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","V11Y W106V Y159R",3
"lib1","SARS-CoV-2","AGTTTCGCTTGCCACG",1,20.66,9.92,-0.84,0.16,2.03,1.01,0.01,">1 nonsynonymous","D34P G51S",2
"lib1","SARS-CoV-2","AGTTTCTATACTTGCC",3,17.38,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","AGTTTCTATCTTCCGT",3,17.57,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99Y F185K",2
"lib1","SARS-CoV-2","AGTTTCTCATCCCAAA",3,8.69,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P7V N13T A81G K87L L95N S129E",6
"lib1","SARS-CoV-2","AGTTTCTGTAATATCG",9,190.01,10.76,0,0.07,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","AGTTTCTTTATTGACT",3,45.34,10.49,-0.27,0.08,2.87,1,0,">1 nonsynonymous","L5Q T63E I142T",3
"lib1","SARS-CoV-2","AGTTTGAAAGTATCCG",4,75.65,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I2T P7L K87Y F99D Y178K",5
"lib1","SARS-CoV-2","AGTTTGAACGTAATCG",11,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M N107G E141N V173P",4
"lib1","SARS-CoV-2","AGTTTGAAGGGGCTAG",9,74.97,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T85R K94R G101T C195S",4
"lib1","SARS-CoV-2","AGTTTGAATATTATCA",2,8.18,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","AGTTTGAATTTCTAGA",7,98.91,10.75,-0.01,0.07,2.92,1.03,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","AGTTTGACAACTTACA",4,91.32,10.75,-0.02,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTTGACTTAACAGG",3,63.59,10.57,-0.19,0.04,2.93,1.03,0,">1 nonsynonymous","T3R K48N",2
"lib1","SARS-CoV-2","AGTTTGACTTCGACAA",4,171.19,6,-4.76,0.65,1.53,1.13,0,">1 nonsynonymous","L122D P177L",2
"lib1","SARS-CoV-2","AGTTTGCATAAGAGCC",3,34.61,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9Q R136D D137Y E154C G172S",5
"lib1","SARS-CoV-2","AGTTTGCATCACATGC",2,8.24,6.49,-4.27,0.58,1.65,1.17,0.03,">1 nonsynonymous","N13C Y93L Y119L K128P S184G",5
"lib1","SARS-CoV-2","AGTTTGCCCTTAACCC",4,28.92,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","A22W K48Q T63R T85I R127H",5
"lib1","SARS-CoV-2","AGTTTGCCCTTTGAGT",8,65.45,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P54D C61V D90R R124F",4
"lib1","SARS-CoV-2","AGTTTGCCTCACTGGA",1,12.52,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A89V T148N C150F",3
"lib1","SARS-CoV-2","AGTTTGCGCGGACATC",5,46.66,6,-4.76,2,3,1.15,0,">1 nonsynonymous","R25P N58R T100E S113R L183C",5
"lib1","SARS-CoV-2","AGTTTGCTGCTCACGT",1,28.86,10.76,0,0.07,2.88,1.08,0,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","AGTTTGCTGTGATTCA",1,19.22,9.33,-1.43,0.19,2.49,1.15,0.02,">1 nonsynonymous","N58T G174L",2
"lib1","SARS-CoV-2","AGTTTGCTTATTCTTA",7,203.19,8.7,-2.07,0.08,2.73,1.11,0,">1 nonsynonymous","E141H N157T",2
"lib1","SARS-CoV-2","AGTTTGGAATCAACCT",4,1.61,NA,NA,NA,NA,NA,NA,"stop","F12S S69A N107K T148L G174A S184*",6
"lib1","SARS-CoV-2","AGTTTGTCAACCTGCC",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I A145S",2
"lib1","SARS-CoV-2","AGTTTTAAAATAGAGA",4,20.82,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G9K K87N N107F T148G E154P",5
"lib1","SARS-CoV-2","AGTTTTACAATACAGA",1,11.59,6,-4.76,2,3,1.03,0,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","AGTTTTAGGTCAGTCA",1,3.72,NA,NA,NA,NA,NA,NA,"stop","D68N I88* S108L P133W E141L C150R V173S",7
"lib1","SARS-CoV-2","AGTTTTATGGCAGCCA",2,27.07,6.5,-4.27,0.44,1.5,1.06,0.03,">1 nonsynonymous","L38C K94T S200N",3
"lib1","SARS-CoV-2","AGTTTTCAACATTACC",5,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K C61I D68T Q144E A190N",5
"lib1","SARS-CoV-2","AGTTTTCCCAAATAAA",2,178.11,10.69,-0.07,0.06,2.89,1.06,0,"1 nonsynonymous","S45D",1
"lib1","SARS-CoV-2","AGTTTTCCGATAGATC",3,60.33,6.78,-3.98,0.27,1.5,1.15,0.01,">1 nonsynonymous","Y39P A105L",2
"lib1","SARS-CoV-2","AGTTTTCGAATTTCTG",3,37.1,10.7,-0.06,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","AGTTTTCGACACTATT",6,53.21,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K94L I142N",2
"lib1","SARS-CoV-2","AGTTTTCGTAGTGCGC",9,34.3,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","C49E",1
"lib1","SARS-CoV-2","AGTTTTGAGTCTTGCG",8,35.52,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","D112P Y121M E141V G174W",4
"lib1","SARS-CoV-2","AGTTTTGCCCTTTAGA",5,91.68,10.04,-0.72,0.09,2.55,1.03,0,">1 nonsynonymous","V77I F99Y",2
"lib1","SARS-CoV-2","AGTTTTGCTAGTAGGA",3,103.12,10.78,0.02,0.05,2.89,1.05,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","AGTTTTGGATACAAGT",2,8.18,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C31F T85R Y93N W106P N171Y",5
"lib1","SARS-CoV-2","AGTTTTGGATTAAGGT",1,27.12,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","L95W",1
"lib1","SARS-CoV-2","AGTTTTGGTACGACCT",1,14.1,10.05,-0.72,0.2,1.7,1.03,0.02,">1 nonsynonymous","K114V K128V R136N",3
"lib1","SARS-CoV-2","AGTTTTGTAGGCCGTG",4,84.1,10.71,-0.06,0.1,2.69,1.1,0,"1 nonsynonymous","G9D",1
"lib1","SARS-CoV-2","AGTTTTGTGAAAACTG",4,10.64,6.17,-4.6,1.08,1.5,1.09,0.03,">1 nonsynonymous","R27Q G86R W106K P133L P169V",5
"lib1","SARS-CoV-2","AGTTTTTATAACAATA",3,43.77,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G74H P96T F167L",3
"lib1","SARS-CoV-2","AGTTTTTATGTAAATG",1,26.66,10.43,-0.34,0.07,2.82,1.02,0,"1 nonsynonymous","P169M",1
"lib1","SARS-CoV-2","AGTTTTTCCAGAAAAA",8,25.72,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","G9A Y93R",2
"lib1","SARS-CoV-2","AGTTTTTGAAGTTGGA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V R78L G101R",3
"lib1","SARS-CoV-2","AGTTTTTTCAGATTTT",6,4,NA,NA,NA,NA,NA,NA,"stop","A14L V103G I138*",3
"lib1","SARS-CoV-2","ATAAAAAAAACCCATG",4,73.35,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","T46S T63Y K87T N157T Q176P",5
"lib1","SARS-CoV-2","ATAAAAAAAACTCAAA",4,134.67,8.49,-2.27,0.14,2.01,1.09,0.01,">1 nonsynonymous","N64T W106G L125T",3
"lib1","SARS-CoV-2","ATAAAAAAAATGTGGT",2,42.96,8.52,-2.24,0.08,2.7,1.05,0,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","ATAAAAAAAGTAGGAT",6,38.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2V I72L K87P Y93A T100A S129V",6
"lib1","SARS-CoV-2","ATAAAAAAATAGAATC",3,82.2,9.92,-0.85,0.1,2.32,1.09,0,">1 nonsynonymous","L95M G116R Q144E",3
"lib1","SARS-CoV-2","ATAAAAAACATCGATG",2,14.34,7.04,-3.73,0.37,1.5,1.06,0.04,">1 nonsynonymous","F99S F156V",2
"lib1","SARS-CoV-2","ATAAAAAACATCGCGA",1,30.27,6,-4.76,2,1.5,1.1,0.03,"1 nonsynonymous","V71Y",1
"lib1","SARS-CoV-2","ATAAAAAACCCATGAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V103* P197F",2
"lib1","SARS-CoV-2","ATAAAAAACCGATCCG",2,21.04,10.57,-0.2,0.07,2.74,1.19,0,">1 nonsynonymous","A67V G196S T201P",3
"lib1","SARS-CoV-2","ATAAAAAACGGTCTCT",9,56.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y91M T148N Y175L",3
"lib1","SARS-CoV-2","ATAAAAAAGAATACTT",1,28.73,9.91,-0.85,0.14,1.91,1.03,0.01,">1 nonsynonymous","D34V L57K V153H",3
"lib1","SARS-CoV-2","ATAAAAAAGCGACGTT",6,52.46,10.75,-0.01,0.09,2.85,1.06,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","ATAAAAAAGGAGAGTC",2,25.7,8.27,-2.49,0.34,1.5,1.21,0.04,">1 nonsynonymous","A33S N157Y P197G",3
"lib1","SARS-CoV-2","ATAAAAAATAATAATG",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I D98V L187R",3
"lib1","SARS-CoV-2","ATAAAAAATTATGGTA",4,121.71,10.76,0,0.07,2.79,1.06,0,">1 nonsynonymous","V37F Q84L K199Y",3
"lib1","SARS-CoV-2","ATAAAAAATTTTATTC",4,48.5,10.75,-0.02,0.09,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAAACAAGCCACT",3,27.32,10.19,-0.57,0.1,2.41,1,0.01,">1 nonsynonymous","R27K S45K K56W",3
"lib1","SARS-CoV-2","ATAAAAACACGAGAAT",3,25.17,10.37,-0.4,0.1,2.92,1,0,">1 nonsynonymous","K87A K132V V173D",3
"lib1","SARS-CoV-2","ATAAAAACAGCCTAGA",9,34.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61R A81I N118G G146E T201R",5
"lib1","SARS-CoV-2","ATAAAAACCAAATAAT",1,19.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R Y35S D59A N130H",4
"lib1","SARS-CoV-2","ATAAAAACTTATTCGA",2,17.6,9.46,-1.31,0.08,2.88,1.1,0,">1 nonsynonymous","F44I R78D L125S P149R",4
"lib1","SARS-CoV-2","ATAAAAAGAATCCGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M V32P",2
"lib1","SARS-CoV-2","ATAAAAAGCCGTACTA",4,90.3,8.75,-2.01,0.1,2.43,1.13,0,">1 nonsynonymous","S41Y K56D A81V L122Q G155A N171L",6
"lib1","SARS-CoV-2","ATAAAAAGCTACATAC",1,10.41,10.69,-0.08,0.06,2.97,1.02,0,"1 nonsynonymous","G196W",1
"lib1","SARS-CoV-2","ATAAAAAGGGGACTAT",3,12.33,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T55L K87S Y93G C150F",4
"lib1","SARS-CoV-2","ATAAAAAGGTCGTCCA",12,183.71,10.75,-0.01,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAAAGTCCATATG",8,10097.17,10.77,0.01,0.05,2.92,1.04,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","ATAAAAAGTCTAACAG",5,71.54,8.39,-2.37,0.33,1.62,1.15,0.04,">1 nonsynonymous","L57R N120P",2
"lib1","SARS-CoV-2","ATAAAAAGTGCGTGCT",4,24.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81P F134S T170Q",3
"lib1","SARS-CoV-2","ATAAAAAGTGTTACCG",7,62.95,10.55,-0.21,0.06,2.92,1,0,">1 nonsynonymous","L60R D98E S200I",3
"lib1","SARS-CoV-2","ATAAAAAGTTAGCATA",2,2.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","ATAAAAATACGATTAA",4,33.37,7.8,-2.97,0.26,1.5,1.1,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","ATAAAAATACGTACGC",1,3.42,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAAATACTGCTAC",4,24.56,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","Y21W D137Q C158Q",3
"lib1","SARS-CoV-2","ATAAAAATCAAGGTCG",5,26.93,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","E10V L95I R179F",3
"lib1","SARS-CoV-2","ATAAAAATCAGATACT",3,10.76,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V11P K56T F62G C102L N120T",5
"lib1","SARS-CoV-2","ATAAAAATCCAGGTCC",2,34.65,10.48,-0.29,0.03,2.97,1,0,">1 nonsynonymous","Y91M L122T",2
"lib1","SARS-CoV-2","ATAAAAATCTGTACCC",2,77.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5R S43I N157G Y175R",4
"lib1","SARS-CoV-2","ATAAAAATGACCATAA",3,37.62,8.38,-2.39,0.22,1.52,1.15,0.02,">1 nonsynonymous","L57W Y119W G146D",3
"lib1","SARS-CoV-2","ATAAAAATGATAACAT",2,117.23,10.66,-0.11,0.04,2.94,1.01,0,">1 nonsynonymous","V37R K132V",2
"lib1","SARS-CoV-2","ATAAAAATGGGGTTGA",5,22.93,10.78,0.02,0.12,2.73,1.02,0.01,"1 nonsynonymous","Y39V",1
"lib1","SARS-CoV-2","ATAAAAATGGTAACAA",6,58.18,9.38,-1.38,0.2,1.5,1.12,0.02,">1 nonsynonymous","N30V L38V",2
"lib1","SARS-CoV-2","ATAAAAATGTAATACA",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L F126L",2
"lib1","SARS-CoV-2","ATAAAAATTAATAATA",1,15.75,10.14,-0.63,0.13,2.47,1,0.01,">1 nonsynonymous","N1W D59K G83F I138N",4
"lib1","SARS-CoV-2","ATAAAAATTATCTGCA",4,16.13,10.05,-0.71,0.14,2.07,1.12,0.01,">1 nonsynonymous","K56F Q79M",2
"lib1","SARS-CoV-2","ATAAAACAAACATGGT",9,138.98,9.75,-1.01,0.07,2.54,1.05,0,">1 nonsynonymous","D90F A145T",2
"lib1","SARS-CoV-2","ATAAAACAACTGAAAC",6,5.03,NA,NA,NA,NA,NA,NA,"stop","W106* V173F P177L",3
"lib1","SARS-CoV-2","ATAAAACAATATAATA",3,11.49,NA,NA,NA,NA,NA,NA,"stop","R16M Y91K G117N N157Q G166* G172S",6
"lib1","SARS-CoV-2","ATAAAACAATTGCAAA",1,26.38,10.46,-0.31,0.11,3,1,0.01,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","ATAAAACACAGTGTAA",17,321.21,10.54,-0.23,0.04,2.91,1.02,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","ATAAAACACGATCTTA",4,46.25,10.66,-0.1,0.04,2.95,1.01,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","ATAAAACACTACCTAT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","Q79E G86M G117* E141* P197L",5
"lib1","SARS-CoV-2","ATAAAACAGATTAGGG",8,152.7,9.36,-1.4,0.09,1.9,1.08,0,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","ATAAAACAGGATCCGC",4,14.4,7.68,-3.09,0.46,1.76,1.25,0.07,">1 nonsynonymous","G117C F126Y",2
"lib1","SARS-CoV-2","ATAAAACAGTCCAGAC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","L5P S41E C61* F156I",4
"lib1","SARS-CoV-2","ATAAAACATCCTTATA",1,36.52,10.15,-0.62,0.07,2.58,1.05,0,">1 nonsynonymous","Y39E N64R S139H",3
"lib1","SARS-CoV-2","ATAAAACATTTCCATA",5,60.23,10.83,0.07,0.06,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAACCAATACTCC",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104S C158L",2
"lib1","SARS-CoV-2","ATAAAACCACCACTGC",3,0.66,NA,NA,NA,NA,NA,NA,"stop","N4T A14C Y93R S147* L162Q",5
"lib1","SARS-CoV-2","ATAAAACCATAAACCC",3,40.23,10.65,-0.12,0.17,2.61,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAACCATGGTCTA",7,1.74,NA,NA,NA,NA,NA,NA,"stop","V103* D137E",2
"lib1","SARS-CoV-2","ATAAAACCCATATCGC",1,17.55,6.83,-3.93,0.56,1.5,1,0.05,">1 nonsynonymous","K94A R179N",2
"lib1","SARS-CoV-2","ATAAAACCCCACCGTA",5,73.88,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V20L N24F N120H T140L",4
"lib1","SARS-CoV-2","ATAAAACCCCCCCACA",5,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y D90L W106G N118P",4
"lib1","SARS-CoV-2","ATAAAACCTAAATGCA",1,30.79,10.68,-0.08,0.12,2.84,1,0.01,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","ATAAAACCTGTACTCT",1,1.49,NA,NA,NA,NA,NA,NA,"stop","L5* V37K D98F Y119S",4
"lib1","SARS-CoV-2","ATAAAACGAACCTACG",4,19.52,10.21,-0.56,0.07,2.97,1.01,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","ATAAAACGAGCAGATC",2,5.33,6.3,-4.46,2,3,1.1,0.01,">1 nonsynonymous","F12N D34I D68G",3
"lib1","SARS-CoV-2","ATAAAACGCAAATTCA",2,22.6,7.98,-2.78,0.36,1.5,1,0.06,">1 nonsynonymous","P7N S19G K56P R136L T140H",5
"lib1","SARS-CoV-2","ATAAAACGGTGATATT",5,58.26,10.62,-0.15,0.04,2.95,1,0,">1 nonsynonymous","F8M G83K T100V",3
"lib1","SARS-CoV-2","ATAAAACGTATATTCT",7,80.15,10.49,-0.28,0.06,2.9,1.04,0,">1 nonsynonymous","G9S G51H Q144S",3
"lib1","SARS-CoV-2","ATAAAACGTTAACCCT",8,131.12,10.71,-0.05,0.05,2.91,1.03,0,">1 nonsynonymous","P149T E154R A190V K199H",4
"lib1","SARS-CoV-2","ATAAAACTAAAGAGCA",3,74.69,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A81D K87F P96E C102L G117Y F126V Y178I",7
"lib1","SARS-CoV-2","ATAAAACTAAGCCAGT",3,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A42Y N120C",3
"lib1","SARS-CoV-2","ATAAAACTAGAATGTG",3,40.57,8.26,-2.51,0.3,1.5,1.07,0.04,">1 nonsynonymous","S45W Y121W S129F",3
"lib1","SARS-CoV-2","ATAAAACTCACTCTGA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","T148* G152M",2
"lib1","SARS-CoV-2","ATAAAACTCCCATTTT",6,87.97,10.38,-0.38,0.05,2.88,1.06,0,">1 nonsynonymous","N40P N151T",2
"lib1","SARS-CoV-2","ATAAAACTCCTACCCA",3,40.1,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R25V G86F W106L K114L Q168K",5
"lib1","SARS-CoV-2","ATAAAACTGTGACGTA",1,53.58,8.74,-2.02,0.07,2.74,1.12,0,"1 nonsynonymous","I142D",1
"lib1","SARS-CoV-2","ATAAAACTTACTCTAT",1,17.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22M C49A T85M G101D",4
"lib1","SARS-CoV-2","ATAAAACTTTGCTAAA",5,33.21,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G83D N107Y C150T L188I",4
"lib1","SARS-CoV-2","ATAAAACTTTTATACT",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59Q R78Y L183P",3
"lib1","SARS-CoV-2","ATAAAAGAACCTGAAT",1,0.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144K",1
"lib1","SARS-CoV-2","ATAAAAGAAGAACCTT",3,3.23,NA,NA,NA,NA,NA,NA,"stop","N4S R27E K56* I88L C102L",5
"lib1","SARS-CoV-2","ATAAAAGACAAAGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* S45H D98G N151T",4
"lib1","SARS-CoV-2","ATAAAAGACCTGATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28E S69K Y93* V103R Y123V F160M V173A",7
"lib1","SARS-CoV-2","ATAAAAGACTAGTAAT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","G9N G166* S200I",3
"lib1","SARS-CoV-2","ATAAAAGAGTTGAACA",8,142.36,10.51,-0.25,0.04,2.91,1.05,0,">1 nonsynonymous","L5N T148C",2
"lib1","SARS-CoV-2","ATAAAAGATCTTTTCT",8,225.52,10.75,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAAGATTGACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K48M N58V E76S Y91* T100I G152D S200W",7
"lib1","SARS-CoV-2","ATAAAAGATTGTAAAA",2,8.34,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T3S A33N I80K D90Q K199Y",5
"lib1","SARS-CoV-2","ATAAAAGCAATACGGA",4,11.06,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11L I104K Q168E",3
"lib1","SARS-CoV-2","ATAAAAGCGAGGATGG",1,25.92,9.83,-0.94,0.12,2.8,1.04,0.01,">1 nonsynonymous","Y143W S147Y",2
"lib1","SARS-CoV-2","ATAAAAGCTCCAACCG",4,119.08,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N118C Y175L",2
"lib1","SARS-CoV-2","ATAAAAGGCGACATCT",8,48.9,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K26P L60S N120Y E141D F156S",5
"lib1","SARS-CoV-2","ATAAAAGTAATAACTG",4,58.13,9.95,-0.82,0.09,2.46,1,0,">1 nonsynonymous","F44D D59I",2
"lib1","SARS-CoV-2","ATAAAAGTAGATATGG",3,20.37,10.74,-0.03,0.06,2.94,1.03,0,"1 nonsynonymous","K26L",1
"lib1","SARS-CoV-2","ATAAAAGTATTTCCAC",1,11.8,6,-4.76,0.48,3,1.05,0,">1 nonsynonymous","F99A I104W Q168P",3
"lib1","SARS-CoV-2","ATAAAAGTCTCTAATG",3,23.58,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","K48S D112S Y143Q",3
"lib1","SARS-CoV-2","ATAAAAGTGAGACACT",7,0.06,NA,NA,NA,NA,NA,NA,"stop","L95T W106* N151Q",3
"lib1","SARS-CoV-2","ATAAAAGTGAGATATA",2,20.88,10.86,0.09,0.07,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAAGTGGAAAAGT",6,31.99,6,-4.76,2,1.5,1.2,0.04,"1 nonsynonymous","Y93G",1
"lib1","SARS-CoV-2","ATAAAAGTTGAGCTAA",14,150.86,10.16,-0.6,0.05,2.84,1.01,0,">1 nonsynonymous","A33R A42D S139T",3
"lib1","SARS-CoV-2","ATAAAAGTTTAATAGC",1,10.3,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","W23K L95H W106G",3
"lib1","SARS-CoV-2","ATAAAATAAGCGAATT",2,9,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A81G G86C G174W",3
"lib1","SARS-CoV-2","ATAAAATAATAAAGTC",1,5.74,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A33D G51E G117M P149L",4
"lib1","SARS-CoV-2","ATAAAATAATCAGAGT",4,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y S45W Q84Y",3
"lib1","SARS-CoV-2","ATAAAATAATTCATCA",5,25.67,8.19,-2.58,0.42,1.5,1,0.07,">1 nonsynonymous","C6W K56Y N64W Q163P",4
"lib1","SARS-CoV-2","ATAAAATACACCGATA",2,43.65,8.33,-2.44,0.2,1.89,1.16,0.02,">1 nonsynonymous","N40V N58S Y119V",3
"lib1","SARS-CoV-2","ATAAAATACACGAGAG",4,40.86,9.33,-1.43,0.07,2.71,1.13,0,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","ATAAAATACGTCACAT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib1","SARS-CoV-2","ATAAAATAGAATATCA",4,6.26,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N1I L5Q S19H A42I D137T",5
"lib1","SARS-CoV-2","ATAAAATAGAGGTTAG",1,44.92,10.76,0,0.07,2.93,1.02,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","ATAAAATAGGATCTAT",2,10.83,8.15,-2.62,0.28,2.12,1.04,0.03,">1 nonsynonymous","P7K A14C Y119I",3
"lib1","SARS-CoV-2","ATAAAATATACAAGAC",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122V K132M",2
"lib1","SARS-CoV-2","ATAAAATATGATCATA",9,61.86,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G9T V20G F44T K56P T63R",5
"lib1","SARS-CoV-2","ATAAAATATTATAACA",3,73.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T46S Y143N G174V",3
"lib1","SARS-CoV-2","ATAAAATCAAAAAACT",8,0.62,NA,NA,NA,NA,NA,NA,"stop","Y119* D137V V194I",3
"lib1","SARS-CoV-2","ATAAAATCAACAAAAC",8,158.92,10.28,-0.49,0.04,2.89,1.03,0,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","ATAAAATCGAGTATTA",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S A105D",2
"lib1","SARS-CoV-2","ATAAAATCTGAATATT",3,37.07,9.93,-0.84,0.1,2.22,1.05,0,">1 nonsynonymous","V11G D98N N130R T201K",4
"lib1","SARS-CoV-2","ATAAAATCTTCCTATT",4,151.47,10.04,-0.72,0.09,2.24,1.03,0,">1 nonsynonymous","N40L K48L S53L",3
"lib1","SARS-CoV-2","ATAAAATGAAATCTAA",3,33.36,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","ATAAAATGAACTGAGC",1,4.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","ATAAAATGACCACAAT",4,79.08,9.59,-1.17,0.1,2.54,1.08,0,">1 nonsynonymous","E10N Y121L F134M",3
"lib1","SARS-CoV-2","ATAAAATGACCCAGGC",1,6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D G9V T15D F44L K94S N120S",6
"lib1","SARS-CoV-2","ATAAAATGATTTAACT",1,77.49,10.23,-0.54,0.04,2.9,1,0,">1 nonsynonymous","T148S F156I F185L",3
"lib1","SARS-CoV-2","ATAAAATGCAATTTTC",16,190.82,8.22,-2.55,0.19,1.74,1.14,0.01,">1 nonsynonymous","F44A Q84R G117V",3
"lib1","SARS-CoV-2","ATAAAATGGCAGTGAG",5,123.9,10.53,-0.23,0.04,2.89,1.05,0,"1 nonsynonymous","A33I",1
"lib1","SARS-CoV-2","ATAAAATGGGAATTAA",1,44.06,10.73,-0.04,0.06,2.95,1.01,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","ATAAAATGGTGACTAT",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72M K94P T100P",3
"lib1","SARS-CoV-2","ATAAAATGTAAAGCAC",1,14.37,10.66,-0.11,0.47,2.09,1,0.08,">1 nonsynonymous","A18T I88S P96T",3
"lib1","SARS-CoV-2","ATAAAATGTTCTAAAT",4,37.85,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N118L P161R",2
"lib1","SARS-CoV-2","ATAAAATTACATTGTA",1,283.09,10,-0.77,0.08,2.11,1.02,0,">1 nonsynonymous","P7A V37F Y50L",3
"lib1","SARS-CoV-2","ATAAAATTATAATCCG",2,14.66,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K48S T63S Y93R D98V P161N",5
"lib1","SARS-CoV-2","ATAAAATTCCCCCCAG",1,34.73,8.49,-2.27,0.3,1.59,1.2,0.03,">1 nonsynonymous","N13Y P54N T140S T170E",4
"lib1","SARS-CoV-2","ATAAAATTGCCAACGA",4,1.09,NA,NA,NA,NA,NA,NA,"stop","N4T S36* N120I",3
"lib1","SARS-CoV-2","ATAAAATTGGAATGAA",4,170.28,8.4,-2.37,0.11,2.77,1.05,0,">1 nonsynonymous","I28L Y175S",2
"lib1","SARS-CoV-2","ATAAAATTGGTTCTCG",2,21.6,10.56,-0.21,0.1,2.8,1.05,0,">1 nonsynonymous","V65F K132L I138E",3
"lib1","SARS-CoV-2","ATAAAATTGGTTTTCG",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23I F160K",2
"lib1","SARS-CoV-2","ATAAAATTTGTACCCT",2,10.46,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y121I L183R",2
"lib1","SARS-CoV-2","ATAAACAACAATCCCC",6,91.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S45P I80S R136I T140I F156G H189S",6
"lib1","SARS-CoV-2","ATAAACAAGAATGACG",5,42.78,10.75,-0.01,0.11,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAACAAGTCTCGCC",7,137.04,10.75,-0.02,0.06,2.9,1.03,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","ATAAACAATCCATATG",3,14.18,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V71R P96R L122V R127N",4
"lib1","SARS-CoV-2","ATAAACAATCTCCCGC",1,8.4,8.46,-2.31,0.16,2.64,1.08,0.01,">1 nonsynonymous","A22M I142R",2
"lib1","SARS-CoV-2","ATAAACAATGCAATAT",6,75.32,9.44,-1.33,0.1,2.5,1.11,0,">1 nonsynonymous","K87M S139W",2
"lib1","SARS-CoV-2","ATAAACAATTAGAGAT",4,38.47,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6A G83V L95V V115D G174N V180F",6
"lib1","SARS-CoV-2","ATAAACAATTCTCAAA",3,5.22,6,-4.76,2,3,1.06,0,">1 nonsynonymous","A33I P82D E154Y L183C",4
"lib1","SARS-CoV-2","ATAAACACACAAGTCT",3,105.04,10.67,-0.09,0.05,2.91,1.03,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","ATAAACACACAGCTGA",4,45.06,9.57,-1.19,0.11,2.07,1.12,0,">1 nonsynonymous","N13C N64R I138N",3
"lib1","SARS-CoV-2","ATAAACACAGAAATAT",4,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W S41Y F70S",3
"lib1","SARS-CoV-2","ATAAACACATTCGCTA",1,25.65,11.06,0.29,0.1,2.91,1.04,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","ATAAACACCAATTCAA",2,90.11,7.72,-3.05,0.15,2.11,1.2,0.01,">1 nonsynonymous","N120W F126E",2
"lib1","SARS-CoV-2","ATAAACACCCAATGAA",12,207.61,10.75,-0.02,0.07,2.87,1.11,0,">1 nonsynonymous","K56D N120K T201H",3
"lib1","SARS-CoV-2","ATAAACACTTGGCATG",2,15.78,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1S R78L N92V",3
"lib1","SARS-CoV-2","ATAAACAGATAACAAA",2,47.72,7.21,-3.55,0.11,1.97,1.07,0,">1 nonsynonymous","T100L C150V",2
"lib1","SARS-CoV-2","ATAAACAGATATGGAA",6,71.16,10.55,-0.21,0.04,2.96,1.01,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","ATAAACAGCCAGGCCA",7,69.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T15Y A81G Y119K Q176R",4
"lib1","SARS-CoV-2","ATAAACAGCGACTATG",2,17.54,8.17,-2.6,0.25,1.5,1.23,0.03,">1 nonsynonymous","N13H N118I Q168W",3
"lib1","SARS-CoV-2","ATAAACAGGAACAATC",3,82.23,9.19,-1.57,0.1,2.76,1.16,0,">1 nonsynonymous","Y119S V153W",2
"lib1","SARS-CoV-2","ATAAACAGGCACGACC",7,127.79,6,-4.76,2,3,1.25,0,">1 nonsynonymous","G9P L60K A81I F99R Y119M",5
"lib1","SARS-CoV-2","ATAAACAGGGTTAGGC",2,64.66,10.64,-0.12,0.05,2.96,1,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","ATAAACAGTTACTTTA",1,33.76,6,-4.76,1.74,1.5,1.23,0.03,">1 nonsynonymous","G117I R124L R136H",3
"lib1","SARS-CoV-2","ATAAACATAATTAAAT",3,40.07,9.41,-1.35,0.16,1.78,1.13,0.01,">1 nonsynonymous","L38Q K128G I142V T201M",4
"lib1","SARS-CoV-2","ATAAACATAGTTATAG",1,32.73,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S29L P82V V103G Y178S",4
"lib1","SARS-CoV-2","ATAAACATCAATTTTA",1,15.28,6.54,-4.22,0.53,1.5,1.11,0.03,">1 nonsynonymous","P149Y P161D",2
"lib1","SARS-CoV-2","ATAAACATCATAAAGT",1,66.93,10.23,-0.53,0.04,2.96,1,0,">1 nonsynonymous","C61F G174D",2
"lib1","SARS-CoV-2","ATAAACATCCCTAGTA",4,35.87,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8Y A145V F167V S184N",4
"lib1","SARS-CoV-2","ATAAACATCCTTAATC",2,1.98,NA,NA,NA,NA,NA,NA,"stop","A18E C61* A81G N120A",4
"lib1","SARS-CoV-2","ATAAACATCTAAAGCA",2,12.21,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","I88E T170V",2
"lib1","SARS-CoV-2","ATAAACATGAATCTCT",3,252.48,10.2,-0.57,0.05,2.74,1.04,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","ATAAACATGCTCCAGT",2,9.73,9.5,-1.26,0.33,1.55,1,0.04,">1 nonsynonymous","T15E K26R S53G A81L",4
"lib1","SARS-CoV-2","ATAAACATTTAATAAT",2,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89V P96Q",2
"lib1","SARS-CoV-2","ATAAACATTTCTCATA",2,23.95,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G51M A89V P96N",3
"lib1","SARS-CoV-2","ATAAACCAAAAAGGTC",1,17.2,9.77,-1,0.27,1.5,1.06,0.04,">1 nonsynonymous","N1I I104G",2
"lib1","SARS-CoV-2","ATAAACCAAAAGCCAT",8,78.29,10.58,-0.18,0.05,2.83,1.02,0,">1 nonsynonymous","D98L T201L",2
"lib1","SARS-CoV-2","ATAAACCAAGAGTAGG",6,46.2,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","ATAAACCACAACCCTT",6,32.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R78W P96N V103N",3
"lib1","SARS-CoV-2","ATAAACCACATCATAA",5,25.79,9.89,-0.87,0.16,2.21,1,0.01,">1 nonsynonymous","N64Q V77R",2
"lib1","SARS-CoV-2","ATAAACCACCTGCTGT",1,11.59,6,-4.76,2,3,1.19,0,">1 nonsynonymous","Y50C F99Y",2
"lib1","SARS-CoV-2","ATAAACCACGTGACCT",6,57.4,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68V F126D G196W",3
"lib1","SARS-CoV-2","ATAAACCACTGATTCG",2,5.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","ATAAACCAGCGAGACA",1,21.54,10.92,0.15,0.26,2.74,1,0.02,">1 nonsynonymous","I2G S147H",2
"lib1","SARS-CoV-2","ATAAACCAGTTTATAA",3,41.23,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S19L Y50Q F62N T100I Y175K V181M",6
"lib1","SARS-CoV-2","ATAAACCATAAGGCAC",2,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A G86Y L183S",3
"lib1","SARS-CoV-2","ATAAACCATCGCAAAT",1,3.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","ATAAACCCATAATAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y119* V181F",2
"lib1","SARS-CoV-2","ATAAACCCCAACCTAA",5,84.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V32T I104P K128P F134S S184G",5
"lib1","SARS-CoV-2","ATAAACCCCTGAAGTC",10,33.9,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","F44Y C49E Y143G",3
"lib1","SARS-CoV-2","ATAAACCCTTGACTTT",2,22.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I G74L A89L L125V",4
"lib1","SARS-CoV-2","ATAAACCGAAAGCAGT",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N D68G F160S",3
"lib1","SARS-CoV-2","ATAAACCGATACCATA",5,0.03,NA,NA,NA,NA,NA,NA,"stop","S41F Y91P Y123* Q163Y",4
"lib1","SARS-CoV-2","ATAAACCGCATGGCCA",3,27.29,10.6,-0.16,0.11,2.86,1.11,0.01,">1 nonsynonymous","N58D N151W S164P",3
"lib1","SARS-CoV-2","ATAAACCGTGAGGACG",1,28.64,9.65,-1.11,0.16,2.17,1.07,0.01,">1 nonsynonymous","R27A G146W L162I",3
"lib1","SARS-CoV-2","ATAAACCTACGCGGGC",8,160.22,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9K W106P Y165E",3
"lib1","SARS-CoV-2","ATAAACCTCTAGGCAT",9,97.29,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","V77P G117V",2
"lib1","SARS-CoV-2","ATAAACCTGCTAACGG",1,33.97,9.95,-0.82,0.05,2.92,1.07,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","ATAAACCTTGAAGATC",5,68.93,10.67,-0.1,0.07,2.84,1.06,0,">1 nonsynonymous","T3D P149S",2
"lib1","SARS-CoV-2","ATAAACGAAACTCTAT",4,2.98,NA,NA,NA,NA,NA,NA,"stop","L60* D98N N130A Y178A",4
"lib1","SARS-CoV-2","ATAAACGAATAGAAGG",3,67.28,10.6,-0.17,0.05,2.9,1.05,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","ATAAACGAATCGAAGC",3,20.63,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5W N64C N92L I142A",4
"lib1","SARS-CoV-2","ATAAACGACCATGTGA",3,10.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10K D112F",2
"lib1","SARS-CoV-2","ATAAACGACTAAGTTA",4,90.36,9.89,-0.87,0.12,2.05,1.03,0.01,">1 nonsynonymous","K56L W106V F160N",3
"lib1","SARS-CoV-2","ATAAACGAGAATCAAA",3,2.06,NA,NA,NA,NA,NA,NA,"stop","N4R Y39* S45K I88N",4
"lib1","SARS-CoV-2","ATAAACGAGCCATACA",6,26.26,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","G9W R16N L38C R136F N151S T201R",6
"lib1","SARS-CoV-2","ATAAACGCAAAAGAAT",2,52.19,10.75,-0.01,0.07,2.91,1.04,0,"1 nonsynonymous","K198W",1
"lib1","SARS-CoV-2","ATAAACGCAATACAAA",4,23.77,7.18,-3.59,0.39,1.5,1.14,0.04,">1 nonsynonymous","D75R W106V G166T",3
"lib1","SARS-CoV-2","ATAAACGCACACCACT",4,1.08,NA,NA,NA,NA,NA,NA,"stop","I2* G86W T148R",3
"lib1","SARS-CoV-2","ATAAACGCCGCAAATT",8,55,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I2V Y123P I138S",3
"lib1","SARS-CoV-2","ATAAACGCCTCCTAAC",4,3.27,NA,NA,NA,NA,NA,NA,"stop","Y39S A105* L162V",3
"lib1","SARS-CoV-2","ATAAACGCGACAAGAA",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T D112G",2
"lib1","SARS-CoV-2","ATAAACGCGTTTCTAG",1,1.38,NA,NA,NA,NA,NA,NA,"stop","C49E F99S N118M L125*",4
"lib1","SARS-CoV-2","ATAAACGGACACTTAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","I28A Y35R T46* K56E C61N D97L N120S F156S",8
"lib1","SARS-CoV-2","ATAAACGGCGATAGAA",2,5.64,9.12,-1.64,0.2,2.6,1.24,0.02,">1 nonsynonymous","Y91L I142A T201M",3
"lib1","SARS-CoV-2","ATAAACGGGGAGGTAG",7,54.59,7.19,-3.58,0.35,1.5,1.19,0.03,">1 nonsynonymous","P133S G155P G174R",3
"lib1","SARS-CoV-2","ATAAACGTAATATAGT",1,7.96,6.58,-4.18,1.07,1.5,1.15,0.01,">1 nonsynonymous","V37G C49A",2
"lib1","SARS-CoV-2","ATAAACGTACTACATC",5,97.97,9.83,-0.93,0.15,2.03,1.1,0.01,">1 nonsynonymous","L131M N151P L187F",3
"lib1","SARS-CoV-2","ATAAACGTCAGAATCC",1,0.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175C",1
"lib1","SARS-CoV-2","ATAAACGTGATAACAA",4,24.26,9.79,-0.97,0.14,1.93,1.05,0.01,">1 nonsynonymous","T85P S139H T148V",3
"lib1","SARS-CoV-2","ATAAACGTGGTACGGA",3,1.78,NA,NA,NA,NA,NA,NA,"stop","F12S I28* K87I E141S",4
"lib1","SARS-CoV-2","ATAAACGTTGTAAACT",1,45.66,10.68,-0.09,0.06,2.84,1.06,0,">1 nonsynonymous","L5T V173N",2
"lib1","SARS-CoV-2","ATAAACTAAAGCCAAA",3,40.02,10.78,0.01,0.06,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAACTAACACACGT",5,0,NA,NA,NA,NA,NA,NA,"stop","K114* G166K",2
"lib1","SARS-CoV-2","ATAAACTAAGCGAATA",6,32.78,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A18L L60R A81S T85K Y143S",5
"lib1","SARS-CoV-2","ATAAACTAAGTAGTCG",6,68.93,10.29,-0.48,0.04,2.88,1.04,0,">1 nonsynonymous","V32L S45A F62L",3
"lib1","SARS-CoV-2","ATAAACTAAGTGGCAC",1,13.98,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R25L D90S F156D",3
"lib1","SARS-CoV-2","ATAAACTATTCTTTGC",2,54.75,9.18,-1.58,0.2,1.5,1.15,0.02,">1 nonsynonymous","P7I G83D D97M",3
"lib1","SARS-CoV-2","ATAAACTATTGCCCCA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","ATAAACTCATATTAAA",1,2.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87G",1
"lib1","SARS-CoV-2","ATAAACTCATTGTTTA",3,17.99,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","T3Y W23A L95Q",3
"lib1","SARS-CoV-2","ATAAACTCCACGCCGT",3,0.85,NA,NA,NA,NA,NA,NA,"stop","W106* E141K",2
"lib1","SARS-CoV-2","ATAAACTCGTCAGACT",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V P54T K114P L125P V181W",5
"lib1","SARS-CoV-2","ATAAACTCTATAGGAA",3,36.34,10.8,0.03,0.11,2.74,1.13,0,"1 nonsynonymous","I104M",1
"lib1","SARS-CoV-2","ATAAACTCTTATAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y119* F167K",2
"lib1","SARS-CoV-2","ATAAACTGAAACATTT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V S184P",2
"lib1","SARS-CoV-2","ATAAACTGACTCAGTT",1,10.13,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","K94E S139R",2
"lib1","SARS-CoV-2","ATAAACTGATTGAATG",5,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S G172M",2
"lib1","SARS-CoV-2","ATAAACTGGGGCGGCA",4,3.81,NA,NA,NA,NA,NA,NA,"stop","I88* F99E E141T",3
"lib1","SARS-CoV-2","ATAAACTGGTACAGGC",3,23.55,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12L T55A V77A K114S I142N",5
"lib1","SARS-CoV-2","ATAAACTTAAACACAC",13,47.91,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D68K I80M N157F",3
"lib1","SARS-CoV-2","ATAAACTTAACCGATG",3,15.65,6.42,-4.35,1.92,1.5,1.21,0.04,">1 nonsynonymous","D34P S41C P96F Y121I E154V T170D G174P",7
"lib1","SARS-CoV-2","ATAAACTTACAAAGTA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","C6Y E10R D112V L122*",4
"lib1","SARS-CoV-2","ATAAACTTACTGTAAC",3,25.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6D W23K C61Y G83W T100D F126G G152Y",7
"lib1","SARS-CoV-2","ATAAACTTCAACAAGA",9,85.12,10.39,-0.38,0.04,2.94,1.02,0,">1 nonsynonymous","T100I L162V G174M",3
"lib1","SARS-CoV-2","ATAAACTTTTACGCCA",3,49.64,9.89,-0.87,0.04,2.9,1.05,0,">1 nonsynonymous","I2C Q168E T201L",3
"lib1","SARS-CoV-2","ATAAACTTTTTTACTT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","F12* K128S",2
"lib1","SARS-CoV-2","ATAAAGAAAAACGGAA",1,25.55,10.75,-0.02,0.11,2.87,1.06,0,">1 nonsynonymous","S29N S43Y",2
"lib1","SARS-CoV-2","ATAAAGAAACAGATAT",6,30.71,7.96,-2.8,0.41,1.5,1,0.05,">1 nonsynonymous","N64A R127C K128N F134I Q163G K198L",6
"lib1","SARS-CoV-2","ATAAAGAACCTACCTG",1,0.48,NA,NA,NA,NA,NA,NA,"stop","N64P N109*",2
"lib1","SARS-CoV-2","ATAAAGAACTTAGAAC",4,45.49,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L95Q N120T R179T",3
"lib1","SARS-CoV-2","ATAAAGAAGAACGAAG",7,46.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41A D112P F126T G155T A190E",5
"lib1","SARS-CoV-2","ATAAAGAATACCTTCA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","P7I A14* D34L D68Y K87C C150Q",6
"lib1","SARS-CoV-2","ATAAAGAATATATAAA",4,185.25,9.7,-1.06,0.04,2.89,1.07,0,">1 nonsynonymous","Y119F L188P",2
"lib1","SARS-CoV-2","ATAAAGAATCCCATAG",3,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E V173F",2
"lib1","SARS-CoV-2","ATAAAGACATCAAATT",2,77.05,8.23,-2.53,0.18,1.5,1.11,0.01,">1 nonsynonymous","G83V P149C F160I",3
"lib1","SARS-CoV-2","ATAAAGACCAACCGAT",2,14.25,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","L5G R124G V173R",3
"lib1","SARS-CoV-2","ATAAAGACCAGAGCTG",1,37.12,10.19,-0.57,0.13,2.52,1,0.01,">1 nonsynonymous","T55L D90R D98L N120A",4
"lib1","SARS-CoV-2","ATAAAGAGAAATTGAT",2,43.93,9.28,-1.48,0.12,2.17,1.18,0.01,">1 nonsynonymous","S53A L60P G116I",3
"lib1","SARS-CoV-2","ATAAAGAGACCCTTGT",7,280.29,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S43P N157L Q176P",3
"lib1","SARS-CoV-2","ATAAAGAGATAAATCA",2,9.79,6.86,-3.9,0.4,1.5,1.14,0.01,">1 nonsynonymous","V37M G51S E135L Q176M",4
"lib1","SARS-CoV-2","ATAAAGAGATTGAGGA",5,0.72,NA,NA,NA,NA,NA,NA,"stop","N24* Y39L N58V",3
"lib1","SARS-CoV-2","ATAAAGAGCGGCGCGA",5,14.48,6,-4.76,2,1.5,1.14,0.08,">1 nonsynonymous","L5G G74E R78C W106S P149I",5
"lib1","SARS-CoV-2","ATAAAGAGGACACGCG",3,32.84,6.72,-4.04,0.52,1.5,1.06,0.04,">1 nonsynonymous","C49Y G101A",2
"lib1","SARS-CoV-2","ATAAAGAGTTGAATTA",7,43.97,10.99,0.23,0.07,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAGATGCAACAAA",2,29.39,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","A14T L38S F62L A89V V115H",5
"lib1","SARS-CoV-2","ATAAAGATGGTTGAAT",6,0.36,NA,NA,NA,NA,NA,NA,"stop","N13K F156*",2
"lib1","SARS-CoV-2","ATAAAGATGTCCAACT",4,27.41,9.81,-0.96,0.12,2.13,1.06,0.01,">1 nonsynonymous","C31F Y178N",2
"lib1","SARS-CoV-2","ATAAAGATTACATGCT",4,27.46,9.43,-1.33,0.23,1.5,1,0.03,">1 nonsynonymous","G9Y T15V N64Q Y93F",4
"lib1","SARS-CoV-2","ATAAAGATTTCTTCAG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","N4R R16S D59N V115M N120Y L162R T201*",7
"lib1","SARS-CoV-2","ATAAAGCAAATAAAAT",1,24.91,9.71,-1.05,0.21,2.09,1.13,0.02,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","ATAAAGCAAGTATGGA",5,120.52,10.25,-0.52,0.06,2.63,1,0,">1 nonsynonymous","T46F K128W",2
"lib1","SARS-CoV-2","ATAAAGCAGACGTCTA",3,63.05,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S69R K94S R124N",3
"lib1","SARS-CoV-2","ATAAAGCATTAATTAC",1,108.81,10.25,-0.51,0.04,2.89,1.03,0,">1 nonsynonymous","I2N V65R",2
"lib1","SARS-CoV-2","ATAAAGCCTACATATG",2,1.01,NA,NA,NA,NA,NA,NA,"stop","F17M V65*",2
"lib1","SARS-CoV-2","ATAAAGCCTGCGGCTG",3,46.66,9.01,-1.76,0.18,1.5,1.09,0.01,">1 nonsynonymous","F44R T63V P133F",3
"lib1","SARS-CoV-2","ATAAAGCGCATCTACA",4,101.92,10.39,-0.37,0.04,2.93,1.01,0,"1 nonsynonymous","E154P",1
"lib1","SARS-CoV-2","ATAAAGCTAAGAAAAG",3,8.36,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","V103W K128S F160R",3
"lib1","SARS-CoV-2","ATAAAGCTATAAGACA",7,331.59,8.64,-2.12,0.08,2.72,1.08,0,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","ATAAAGCTCTAAAATT",3,22.38,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","S45F I88F Y119I K132S",4
"lib1","SARS-CoV-2","ATAAAGCTCTATATCT",6,69.06,10.83,0.07,0.07,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAAAGCTCTATCCCT",1,21.34,10.77,0.01,0.03,2.93,1,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","ATAAAGCTGATACAAC",9,192.88,9.32,-1.44,0.14,1.58,1.13,0.01,">1 nonsynonymous","G9K S29M A89S D98P",4
"lib1","SARS-CoV-2","ATAAAGCTGATTTCTG",2,0.57,NA,NA,NA,NA,NA,NA,"stop","T15S G86* N92R D97P P161A",5
"lib1","SARS-CoV-2","ATAAAGCTGTCAGTGC",4,20.76,9.89,-0.88,0.21,2.07,1.11,0.02,">1 nonsynonymous","T15F S41F K48S",3
"lib1","SARS-CoV-2","ATAAAGCTTTTCTCGA",3,126.52,8.61,-2.16,0.09,2.78,1.08,0,">1 nonsynonymous","D34C S45E F160Y G166K",4
"lib1","SARS-CoV-2","ATAAAGGAAGTCAAAT",3,33.28,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41N P82M F134T Q144R T148P F156P",6
"lib1","SARS-CoV-2","ATAAAGGACAGGCATC",3,46.33,10.43,-0.34,0.06,2.88,1.06,0,">1 nonsynonymous","T3Q K87I S129G",3
"lib1","SARS-CoV-2","ATAAAGGATACAAAGC",1,46.22,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N13Y G86L F134K",3
"lib1","SARS-CoV-2","ATAAAGGATGTCAGCC",9,12.22,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T15N D90V D97G T100R Q168S",5
"lib1","SARS-CoV-2","ATAAAGGATTTTCATT",5,53.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4Y Y93D W106R",3
"lib1","SARS-CoV-2","ATAAAGGCACATCAAA",1,36.62,9.96,-0.81,0.09,2.35,1.03,0,">1 nonsynonymous","P54D Y91H L131I",3
"lib1","SARS-CoV-2","ATAAAGGCCGAATTTG",2,13.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K48S P96D C102W N118C",4
"lib1","SARS-CoV-2","ATAAAGGCTACATGCT",1,9.88,9.81,-0.95,0.18,2.7,1.09,0.03,">1 nonsynonymous","D97S Y143W",2
"lib1","SARS-CoV-2","ATAAAGGGCCAGGTCA",1,29.52,10.68,-0.08,0.07,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAAAGGGGCCTAGTT",5,37.2,10.12,-0.64,0.11,2.48,1.02,0,">1 nonsynonymous","T3G F99Y",2
"lib1","SARS-CoV-2","ATAAAGGGTACTTTGC",1,42.52,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","ATAAAGGTGTATCGAG",2,49.37,8.19,-2.58,0.22,1.5,1.18,0.02,">1 nonsynonymous","L5T K48N A89H D98H",4
"lib1","SARS-CoV-2","ATAAAGGTGTCACCCG",4,3.14,NA,NA,NA,NA,NA,NA,"stop","N13S D75L S164*",3
"lib1","SARS-CoV-2","ATAAAGGTGTGAATCG",4,7.75,9.5,-1.26,0.17,1.69,1.05,0.01,">1 nonsynonymous","L60Y Y93Q F99S",3
"lib1","SARS-CoV-2","ATAAAGTAAACCTAAA",4,0.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATAAAGTAAAGACTAG",7,114.7,10.43,-0.34,0.04,2.93,1.03,0,">1 nonsynonymous","I2G G174K S200D",3
"lib1","SARS-CoV-2","ATAAAGTAAATAGGCG",4,61.38,6,-4.76,1.55,1.5,1.19,0.02,">1 nonsynonymous","L60T E135M T170I P197V",4
"lib1","SARS-CoV-2","ATAAAGTACACTAACC",6,20.95,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G101V Y119S F134L T201S",4
"lib1","SARS-CoV-2","ATAAAGTACGAAAAAC",4,26.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90A K94T D98S",3
"lib1","SARS-CoV-2","ATAAAGTATATCTAAA",8,174.14,10.67,-0.1,0.05,2.9,1.06,0,">1 nonsynonymous","L95I P149R",2
"lib1","SARS-CoV-2","ATAAAGTATGTTTCCG",4,59.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F134P N151Y F167R",3
"lib1","SARS-CoV-2","ATAAAGTCAGCCTCAC",5,101.52,10.14,-0.62,0.06,2.92,1.02,0,"1 nonsynonymous","E154V",1
"lib1","SARS-CoV-2","ATAAAGTCAGTAAAGT",5,115.73,9.5,-1.27,0.08,2.88,1.05,0,"1 nonsynonymous","A145L",1
"lib1","SARS-CoV-2","ATAAAGTCGCTATAGA",4,12.55,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","L57G I88S S113A",3
"lib1","SARS-CoV-2","ATAAAGTGACCTTACT",3,106.06,10.45,-0.32,0.06,2.88,1.04,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","ATAAAGTGAGCACGAT",1,0.8,NA,NA,NA,NA,NA,NA,"stop","G86* S108M Y119F",3
"lib1","SARS-CoV-2","ATAAAGTGCTCTGCAA",3,55.81,10.7,-0.06,0.08,2.9,1.07,0,">1 nonsynonymous","L5G N58Q H189N",3
"lib1","SARS-CoV-2","ATAAAGTGTTCATCAC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","K56T A89* N107F L122E Y175P",5
"lib1","SARS-CoV-2","ATAAAGTTAAATACTA",1,18.25,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","L38Q K94S G116W P133Y Q144K",5
"lib1","SARS-CoV-2","ATAAAGTTGTACGATC",7,19.49,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9H D68S T100C G155C",4
"lib1","SARS-CoV-2","ATAAAGTTTCTAGGTA",4,73.91,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","R25S G83R S139G N151F R179L",5
"lib1","SARS-CoV-2","ATAAATAAAAAAGTGC",6,10.02,NA,NA,NA,NA,NA,NA,"stop","F8T K56S N120* C150H",4
"lib1","SARS-CoV-2","ATAAATAAAACTATAT",1,10.07,10.14,-0.62,0.14,2.8,1,0,">1 nonsynonymous","E141R T148P",2
"lib1","SARS-CoV-2","ATAAATAAAATTCTTG",2,16.67,8.94,-1.82,0.23,1.5,1,0.03,">1 nonsynonymous","F44G A105Y K132L Y165W",4
"lib1","SARS-CoV-2","ATAAATAAACGATATT",4,56.76,10.54,-0.22,0.06,2.87,1.03,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","ATAAATAAATCGTGGA",4,23.22,6,-4.76,1.32,1.5,1.09,0.02,">1 nonsynonymous","K48N T55P K87C N92Q E186G",5
"lib1","SARS-CoV-2","ATAAATAACATTTTGA",4,120.09,8.5,-2.27,0.1,2.8,1.08,0,">1 nonsynonymous","N120P Q168I",2
"lib1","SARS-CoV-2","ATAAATAACGTAACTA",3,24.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V115A R179G",2
"lib1","SARS-CoV-2","ATAAATAATAAATGTT",7,16.33,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N40T C102S K114M S139K",4
"lib1","SARS-CoV-2","ATAAATAATACCCAAT",3,15.88,8.15,-2.62,0.26,1.5,1.2,0.03,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","ATAAATAATACCCATC",7,12.93,NA,NA,NA,NA,NA,NA,"stop","I2* Y50T G174S",3
"lib1","SARS-CoV-2","ATAAATAATTGATATA",5,2.45,NA,NA,NA,NA,NA,NA,"stop","G9* T46H N110H",3
"lib1","SARS-CoV-2","ATAAATAATTGGTGCT",7,77.86,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6M D59I V77K Y121W P149Y P177T",6
"lib1","SARS-CoV-2","ATAAATACAAGAACTG",3,11.27,8.26,-2.51,0.13,2.96,1.04,0.01,">1 nonsynonymous","Y91L F126S",2
"lib1","SARS-CoV-2","ATAAATACACATTATC",2,26.5,9.87,-0.9,0.16,2.49,1.03,0.01,">1 nonsynonymous","D98G N107A",2
"lib1","SARS-CoV-2","ATAAATACAGAAATGT",5,33.63,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S19R G86H S139C",3
"lib1","SARS-CoV-2","ATAAATACAGTAGTCC",4,54.16,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F70R K87Y T100L",3
"lib1","SARS-CoV-2","ATAAATACATGTGGAA",5,147.58,10.2,-0.57,0.04,2.93,1.03,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","ATAAATACCTGACTTA",3,2.17,NA,NA,NA,NA,NA,NA,"stop","N4L S45* D59R T100H Y178E T201A",6
"lib1","SARS-CoV-2","ATAAATACGTTAAACA",2,81.62,10.76,0,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAATACGTTCACGA",4,13.22,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T3G V52T L60A T85A K128L E135R",6
"lib1","SARS-CoV-2","ATAAATAGAATAAACG",1,61.43,6,-4.76,1.17,3,1.27,0.01,">1 nonsynonymous","F62S Y121I P177Y",3
"lib1","SARS-CoV-2","ATAAATAGAGTCCATA",2,21.47,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14W A89M C102L E135W",4
"lib1","SARS-CoV-2","ATAAATAGCCTATGAA",7,2.69,NA,NA,NA,NA,NA,NA,"stop","G9A C102E W106* F134K N157L",5
"lib1","SARS-CoV-2","ATAAATAGCTTAAGAG",4,18.56,8.83,-1.93,0.22,2.17,1.25,0.02,">1 nonsynonymous","D34N L60N K87D",3
"lib1","SARS-CoV-2","ATAAATAGTGCACTTC",3,11.22,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G101R I104V F156I Y165R P191S",5
"lib1","SARS-CoV-2","ATAAATAGTGTAATGA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib1","SARS-CoV-2","ATAAATAGTTATAAAA",2,14.03,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A22V C31L Y93T",3
"lib1","SARS-CoV-2","ATAAATAGTTTCGATC",4,53.53,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A18C L38K Y91G",3
"lib1","SARS-CoV-2","ATAAATATAAACTAGA",4,117.59,10.19,-0.57,0.06,2.84,1.05,0,">1 nonsynonymous","Q79E S129L T148A",3
"lib1","SARS-CoV-2","ATAAATATAACTTTGG",1,50.67,10.65,-0.12,0.05,2.85,1.06,0,">1 nonsynonymous","L111Q K128S E135G",3
"lib1","SARS-CoV-2","ATAAATATACAGGCAT",1,20.06,10.73,-0.04,0.09,2.86,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATAAATATATATGAAA",2,28.34,6.19,-4.57,1.02,1.5,1.25,0.04,">1 nonsynonymous","Y93V P197S",2
"lib1","SARS-CoV-2","ATAAATATATGTCTTG",1,6.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14S T55F A67S E141R",4
"lib1","SARS-CoV-2","ATAAATATCAAGTTAT",6,25.85,8.41,-2.36,0.23,1.53,1.17,0.04,">1 nonsynonymous","D34V F47I T55N N130F E154D T201L",6
"lib1","SARS-CoV-2","ATAAATATTAATAGGA",6,0.7,NA,NA,NA,NA,NA,NA,"stop","K48* I80C D97E S139N",4
"lib1","SARS-CoV-2","ATAAATATTATCATGG",3,11.18,10.5,-0.27,0.18,2.77,1.12,0.01,"1 nonsynonymous","G146H",1
"lib1","SARS-CoV-2","ATAAATATTGAGATTG",2,9.84,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G101T T148F",2
"lib1","SARS-CoV-2","ATAAATATTTCGGGCG",2,40.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A14F S45Y D90S L111T",4
"lib1","SARS-CoV-2","ATAAATCAAAACGAGG",6,34.22,6.4,-4.37,0.7,1.5,1.1,0.05,">1 nonsynonymous","A89L F160L",2
"lib1","SARS-CoV-2","ATAAATCAAACTACGG",1,24.48,9.41,-1.36,0.12,2.15,1.1,0.01,">1 nonsynonymous","C61R Y91G Q168M",3
"lib1","SARS-CoV-2","ATAAATCAAAGGGTAA",2,26.88,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14I V20Y Y50N C61V Y175A R179Y",6
"lib1","SARS-CoV-2","ATAAATCAAATACTTC",1,15.57,8.08,-2.69,0.16,2.4,1.13,0.01,">1 nonsynonymous","L5P C158S",2
"lib1","SARS-CoV-2","ATAAATCAAGCCCAAT",7,63.56,8.32,-2.44,0.16,2.45,1.03,0.01,">1 nonsynonymous","K48R G146V G155E",3
"lib1","SARS-CoV-2","ATAAATCAATGTTGAC",8,58.74,10.77,0.01,0.06,2.93,1.05,0,">1 nonsynonymous","P54H V153K",2
"lib1","SARS-CoV-2","ATAAATCACCCATCCA",4,60.77,10.78,0.01,0.05,2.89,1.05,0,"1 nonsynonymous","K199F",1
"lib1","SARS-CoV-2","ATAAATCACGGACAAA",7,89.72,9.09,-1.67,0.1,2.23,1.09,0,"1 nonsynonymous","Y165V",1
"lib1","SARS-CoV-2","ATAAATCAGAAATTAA",7,140.58,10.78,0.02,0.07,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAATCAGACCTTAT",8,66.51,9.39,-1.38,0.14,1.7,1.15,0.01,">1 nonsynonymous","N24I Y35W P133R",3
"lib1","SARS-CoV-2","ATAAATCATAAGATGC",5,99.11,8.72,-2.04,0.13,2.45,1.09,0.01,"1 nonsynonymous","Y165Q",1
"lib1","SARS-CoV-2","ATAAATCATTTTCCTT",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N K94M T100P",3
"lib1","SARS-CoV-2","ATAAATCCCTGGGACG",3,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S E135F",2
"lib1","SARS-CoV-2","ATAAATCCTATAATTG",4,43.69,10.04,-0.73,0.14,2.6,1.05,0.01,">1 nonsynonymous","V32L F44R T148S",3
"lib1","SARS-CoV-2","ATAAATCCTGGAACGG",3,7.67,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","V52A C61A N107L Y123K",4
"lib1","SARS-CoV-2","ATAAATCCTTCCCAAA",1,50.81,9.19,-1.58,0.12,1.62,1.15,0.01,">1 nonsynonymous","Y39Q W106L S139R",3
"lib1","SARS-CoV-2","ATAAATCGACTGCGGG",1,30.16,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I2T G51T F62N R78C W106L S129F E135T F160C",8
"lib1","SARS-CoV-2","ATAAATCGCCAACCCC",7,52.06,6.11,-4.65,0.84,1.5,1.16,0.02,">1 nonsynonymous","K26G D34G C61D I88H S129F",5
"lib1","SARS-CoV-2","ATAAATCGTAACGTCA",2,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103P T201H",2
"lib1","SARS-CoV-2","ATAAATCGTATACCTA",6,49.98,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34V Q84K R136D",3
"lib1","SARS-CoV-2","ATAAATCTACTAAAGG",2,16.04,6,-4.76,2,1.5,1.24,0.08,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","ATAAATCTCAGTAAAT",7,113.05,10.76,-0.01,0.06,2.94,1.01,0,">1 nonsynonymous","L188H T201N",2
"lib1","SARS-CoV-2","ATAAATCTCGGTTGCA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V A14L D34N A42E K94L F134V T201V",7
"lib1","SARS-CoV-2","ATAAATCTGATAGCCA",8,64.93,9.45,-1.31,0.06,2.85,1.09,0,"1 nonsynonymous","T170E",1
"lib1","SARS-CoV-2","ATAAATCTTATAACAA",1,22.11,10.79,0.02,0.06,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAAATCTTGAAAGCA",1,0.8,NA,NA,NA,NA,NA,NA,"stop","K94* D112Y",2
"lib1","SARS-CoV-2","ATAAATCTTGACAGAC",2,13.68,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I104R A145V S147T",3
"lib1","SARS-CoV-2","ATAAATGAAAAACGCG",2,17.16,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14V S41L Y50T I142C F156N G166V H189G",7
"lib1","SARS-CoV-2","ATAAATGAAAGTACAA",2,4.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182Y",1
"lib1","SARS-CoV-2","ATAAATGAATACCCAT",3,1.8,NA,NA,NA,NA,NA,NA,"stop","N64L Y121* Q168G",3
"lib1","SARS-CoV-2","ATAAATGAATGACGTG",2,58.96,8.71,-2.05,0.09,2.19,1.07,0,">1 nonsynonymous","A42N K48N N157R",3
"lib1","SARS-CoV-2","ATAAATGACTGGTGGT",7,276.88,8.23,-2.53,0.16,2.02,1.1,0.01,">1 nonsynonymous","D98R F126I G155C",3
"lib1","SARS-CoV-2","ATAAATGACTTCACCA",1,26.68,10.67,-0.1,0.05,2.94,1.06,0,">1 nonsynonymous","D90N S129H F160Y",3
"lib1","SARS-CoV-2","ATAAATGACTTTGCAT",1,1.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","ATAAATGAGTTGATAA",2,68.97,8.67,-2.09,0.09,2.76,1.06,0,">1 nonsynonymous","Y119L E141L",2
"lib1","SARS-CoV-2","ATAAATGCACCACATA",5,39.18,10.72,-0.05,0.07,2.9,1.06,0,"1 nonsynonymous","A192E",1
"lib1","SARS-CoV-2","ATAAATGCAGTAGACT",1,110.61,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S53K Y159L P177G T201H",4
"lib1","SARS-CoV-2","ATAAATGCCGCGGTAG",11,2.59,NA,NA,NA,NA,NA,NA,"stop","P149* G174Y",2
"lib1","SARS-CoV-2","ATAAATGCCTTTTAAC",7,20.64,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L95M W106R R179M",3
"lib1","SARS-CoV-2","ATAAATGCTAGCCTCT",2,68.7,9.9,-0.87,0.08,2.03,1.02,0,">1 nonsynonymous","V103M N130R",2
"lib1","SARS-CoV-2","ATAAATGCTCCGGCCA",2,16.32,10.75,-0.02,0.09,2.88,1.02,0,"1 nonsynonymous","N13G",1
"lib1","SARS-CoV-2","ATAAATGGTTCGTAAC",4,60.73,6.7,-4.06,0.49,1.5,1.11,0.04,">1 nonsynonymous","C61H G146D C150L",3
"lib1","SARS-CoV-2","ATAAATGTAATTCTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","L60Y W106C I142S F185* T201D",5
"lib1","SARS-CoV-2","ATAAATGTCATTACCC",2,18.67,6,-4.76,1.76,1.5,1.09,0.02,">1 nonsynonymous","D59R R127F",2
"lib1","SARS-CoV-2","ATAAATGTTGAATTCT",5,0.47,NA,NA,NA,NA,NA,NA,"stop","V103L L122* L131V",3
"lib1","SARS-CoV-2","ATAAATTAAAGAGTGA",3,14.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86D S113V L183P",3
"lib1","SARS-CoV-2","ATAAATTAACAGATGG",4,30,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S69E Y93T",2
"lib1","SARS-CoV-2","ATAAATTAAGTTAACA",3,9.42,8.66,-2.1,0.15,1.93,1.07,0.01,">1 nonsynonymous","L60R A81R Y143L",3
"lib1","SARS-CoV-2","ATAAATTACCTATTAA",11,22.24,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2N F47S P96E V103A Y119G P149M Q168K V182K",8
"lib1","SARS-CoV-2","ATAAATTACGACTTCG",2,11.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G74V P82I Y93E F156I V173S",5
"lib1","SARS-CoV-2","ATAAATTATAAACAAT",1,8.1,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","R25M D112T S139L",3
"lib1","SARS-CoV-2","ATAAATTATCCCAGGG",3,54.23,6.05,-4.72,1.09,1.5,1.14,0.03,">1 nonsynonymous","Y35W C61K D112W N120G I138R",5
"lib1","SARS-CoV-2","ATAAATTATCCTTCAG",1,12.65,10.63,-0.13,0.1,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAATTATGGCATAA",7,199.66,10.7,-0.07,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAATTATTGAAAAC",2,20.47,10.1,-0.66,0.13,2.65,1.12,0.01,">1 nonsynonymous","A14K E135N",2
"lib1","SARS-CoV-2","ATAAATTATTTGTGAG",2,32.96,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C49D K94D Y119K F134S A145K Y165A P177S",7
"lib1","SARS-CoV-2","ATAAATTCAGACGTAT",4,15.27,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C6R D75V A89N A145H",4
"lib1","SARS-CoV-2","ATAAATTCAGGAAAAT",2,44.61,10.75,-0.02,0.07,2.91,1.07,0,"1 nonsynonymous","I2D",1
"lib1","SARS-CoV-2","ATAAATTCGGACTTCC",4,47.83,10.13,-0.63,0.08,2.15,1,0,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","ATAAATTGCTTATTTT",1,33.52,6.43,-4.34,0.41,1.5,1.21,0.01,">1 nonsynonymous","V37Y D98N C150E",3
"lib1","SARS-CoV-2","ATAAATTGTATGTTCA",3,73.22,9.97,-0.8,0.05,2.85,1.04,0,">1 nonsynonymous","N24T T148A F160A T170M",4
"lib1","SARS-CoV-2","ATAAATTGTTACATCA",2,5.32,NA,NA,NA,NA,NA,NA,"stop","D112P T148P E186*",3
"lib1","SARS-CoV-2","ATAAATTTAACAGCTG",2,15.13,6,-4.76,1.99,1.5,1.03,0.02,">1 nonsynonymous","F44N Y50S G155N",3
"lib1","SARS-CoV-2","ATAAATTTAGTGATAC",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T63S D90G",3
"lib1","SARS-CoV-2","ATAAATTTATACAACC",2,14.9,9.67,-1.09,0.18,2.27,1.12,0.02,"1 nonsynonymous","I72A",1
"lib1","SARS-CoV-2","ATAAATTTGGAAAAGT",6,8.64,NA,NA,NA,NA,NA,NA,"stop","D97S Y123* Q176Y",3
"lib1","SARS-CoV-2","ATAACAAAAAACACAC",3,12.27,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C49K I138K Q168L",3
"lib1","SARS-CoV-2","ATAACAAAAACCTCGG",8,15.12,NA,NA,NA,NA,NA,NA,"stop","E10P V103* K128T",3
"lib1","SARS-CoV-2","ATAACAAAATGACTGT",1,13.39,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K87R E135L Y178L",3
"lib1","SARS-CoV-2","ATAACAAACCTGTGGA",3,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47C V103S G117L E141A V180K",5
"lib1","SARS-CoV-2","ATAACAAACGAAATCA",1,12.33,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","G9E G101A T201G",3
"lib1","SARS-CoV-2","ATAACAAACGTCAATA",8,43.46,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G86S S139A C158N",3
"lib1","SARS-CoV-2","ATAACAAAGAGATTCC",4,34.97,8.72,-2.04,0.17,1.5,1.11,0.01,">1 nonsynonymous","I88L S139C",2
"lib1","SARS-CoV-2","ATAACAAAGCAGTTTA",3,0.96,NA,NA,NA,NA,NA,NA,"stop","D34* Q79A P96R T170P",4
"lib1","SARS-CoV-2","ATAACAAAGGAAACAG",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G166E G174C",2
"lib1","SARS-CoV-2","ATAACAAATCGAACAC",11,41.66,6.18,-4.59,0.73,1.5,1.07,0.02,">1 nonsynonymous","R78I Y121G S129W P161T L187A",5
"lib1","SARS-CoV-2","ATAACAAATGCACGGC",10,1.47,NA,NA,NA,NA,NA,NA,"stop","R78V T85* Y165V V181M",4
"lib1","SARS-CoV-2","ATAACAAATGTCAAGT",11,4.62,NA,NA,NA,NA,NA,NA,"stop","V37L T85S G101C I138*",4
"lib1","SARS-CoV-2","ATAACAAATTGCAGTT",4,82.04,10.86,0.09,0.07,2.84,1.11,0,"1 nonsynonymous","N171F",1
"lib1","SARS-CoV-2","ATAACAAATTTCCTTT",8,150.22,10.19,-0.58,0.05,2.84,1.01,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","ATAACAACAATCGTAA",2,15.01,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","N107Y G174Q",2
"lib1","SARS-CoV-2","ATAACAACACGCCCAG",1,17.28,9.87,-0.9,0.1,2.88,1.1,0,">1 nonsynonymous","N64C D98G T170S",3
"lib1","SARS-CoV-2","ATAACAACCCGGATAT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","W23K T63P R73Y C195*",4
"lib1","SARS-CoV-2","ATAACAACCTCATATT",10,98.45,10.63,-0.14,0.03,2.92,1,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","ATAACAACCTTATGAG",4,83.96,10.71,-0.06,0.06,2.86,1.06,0,">1 nonsynonymous","S41D T148M",2
"lib1","SARS-CoV-2","ATAACAACTGTTGGTG",2,24.78,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","D59S D97H F167I",3
"lib1","SARS-CoV-2","ATAACAAGAGGCACGA",5,39.77,6.18,-4.58,0.62,1.5,1.17,0.01,">1 nonsynonymous","I28N S41G D98V R136T G152V",5
"lib1","SARS-CoV-2","ATAACAAGGTTTGGGG",1,33.71,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","T85K L131R I142N",3
"lib1","SARS-CoV-2","ATAACAAGTATGACAC",3,28.26,10.45,-0.31,0.07,2.9,1.02,0,">1 nonsynonymous","T55F N64I",2
"lib1","SARS-CoV-2","ATAACAATAGAATAGG",1,17.26,10.26,-0.5,0.06,2.83,1.04,0,">1 nonsynonymous","K48N R136C",2
"lib1","SARS-CoV-2","ATAACAATATTCACTA",1,22.92,10.39,-0.38,0.13,2.99,1.02,0.01,"1 nonsynonymous","A18M",1
"lib1","SARS-CoV-2","ATAACAATGGTGCCGT",2,41.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P177F A190E",2
"lib1","SARS-CoV-2","ATAACAATTAGACCTA",2,8.43,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","I142H V173F V181H",3
"lib1","SARS-CoV-2","ATAACAATTGGGACCG",3,57.08,10.16,-0.61,0.09,2.54,1.06,0,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","ATAACAATTGTGCGTT",3,34.32,10.79,0.03,0.07,2.9,1.05,0,">1 nonsynonymous","F134R P197L",2
"lib1","SARS-CoV-2","ATAACACAATGTGAAG",5,56,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N13W P82R Y119Q N157C",4
"lib1","SARS-CoV-2","ATAACACATAGAAAAT",4,1.96,NA,NA,NA,NA,NA,NA,"stop","Y35R F44C D59L D90* Y119C",5
"lib1","SARS-CoV-2","ATAACACATATAAATA",3,13.22,8.5,-2.27,0.21,2.72,1.1,0.02,">1 nonsynonymous","Y35R F126Y T201L",3
"lib1","SARS-CoV-2","ATAACACATTCACAAA",1,5.38,9.18,-1.58,0.48,1.94,1,0.05,">1 nonsynonymous","G86E N120D",2
"lib1","SARS-CoV-2","ATAACACATTTTACAT",5,18.08,7.5,-3.26,0.38,1.5,1.3,0.03,">1 nonsynonymous","F17S T100A",2
"lib1","SARS-CoV-2","ATAACACCAATAGTTA",2,41.67,10.38,-0.39,0.09,2.59,1.01,0,">1 nonsynonymous","Y21V Y91L",2
"lib1","SARS-CoV-2","ATAACACCACTGAAAC",7,147.41,9.71,-1.06,0.09,2.15,1.06,0,">1 nonsynonymous","C6E N58M F160M",3
"lib1","SARS-CoV-2","ATAACACCATTGTACC",4,67.56,6.03,-4.74,1.13,1.5,1.19,0.02,">1 nonsynonymous","F47M Y93V F134C L188W P197A",5
"lib1","SARS-CoV-2","ATAACACCCAACTGCT",3,26.21,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","T15V D68V R127G",3
"lib1","SARS-CoV-2","ATAACACCTATTAATT",3,41.59,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","Y35D S41M Y121N P133S G166F",5
"lib1","SARS-CoV-2","ATAACACCTCTGATAT",3,36.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2S C61T I88V A105K",4
"lib1","SARS-CoV-2","ATAACACGAAGATAAC",2,19.13,10.06,-0.7,0.09,2.72,1.03,0.01,">1 nonsynonymous","A42N P96R",2
"lib1","SARS-CoV-2","ATAACACGCAAACGAA",4,41.06,10.79,0.03,0.11,2.85,1.09,0,">1 nonsynonymous","P7Q Q84S",2
"lib1","SARS-CoV-2","ATAACACGCGAAAGAA",1,18.94,10.45,-0.32,0.11,2.76,1.16,0.01,"1 nonsynonymous","E141L",1
"lib1","SARS-CoV-2","ATAACACGGGGGCATG",3,10.14,10.62,-0.14,0.04,2.99,1,0,">1 nonsynonymous","S29N K132T",2
"lib1","SARS-CoV-2","ATAACACGTCTAACCT",3,23.81,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R25K S129V N151P G196I",4
"lib1","SARS-CoV-2","ATAACACGTTACTGAG",15,116.34,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S29W S43Y I72N A89E",4
"lib1","SARS-CoV-2","ATAACACTTAGGCCAT",2,5.24,10.92,0.15,0.1,3,1,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","ATAACAGACAAGTTTA",10,71.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5V S19T G86F N107V",4
"lib1","SARS-CoV-2","ATAACAGACATAGCAT",2,106.58,9.01,-1.76,0.1,2.06,1.15,0,">1 nonsynonymous","T3N A18H C61K K87S Y178T",5
"lib1","SARS-CoV-2","ATAACAGATGAATTAA",14,120,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1G P82F L122S K128Q G172D",5
"lib1","SARS-CoV-2","ATAACAGCGGGCCTAA",1,23.95,9.82,-0.94,0.14,2.52,1.07,0.01,">1 nonsynonymous","Y39F W106V",2
"lib1","SARS-CoV-2","ATAACAGCTAGGGGGG",1,11.21,6,-4.76,1.75,3,1.17,0.02,">1 nonsynonymous","C6I K94P",2
"lib1","SARS-CoV-2","ATAACAGGAAATGGTG",1,25.47,8.36,-2.4,0.14,2.22,1.13,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","ATAACAGGATTAAGCG",1,42.4,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A18S G101N P149T G155R G166Y",5
"lib1","SARS-CoV-2","ATAACAGGGAGGGGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P T140M",2
"lib1","SARS-CoV-2","ATAACAGGGGCCCAGG",3,43.52,6.9,-3.86,0.35,1.5,1.21,0.02,">1 nonsynonymous","P82S D97G E154K",3
"lib1","SARS-CoV-2","ATAACAGGTAGGGCCA",6,115.98,10.05,-0.71,0.05,2.82,1.01,0,">1 nonsynonymous","C6E S36N K128S T201V",4
"lib1","SARS-CoV-2","ATAACAGTATAAACCA",3,75.09,10.43,-0.34,0.05,2.94,1.04,0,">1 nonsynonymous","K87V K128Y",2
"lib1","SARS-CoV-2","ATAACAGTATTACGAA",2,88.63,10.12,-0.64,0.06,2.87,1,0,">1 nonsynonymous","Y35M F62D G155R",3
"lib1","SARS-CoV-2","ATAACAGTCATTTCAA",13,0.67,NA,NA,NA,NA,NA,NA,"stop","L95P C102N L122R Y165* S184Y",5
"lib1","SARS-CoV-2","ATAACAGTTAGTGTCA",1,7.53,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","G101I G172L S200Y",3
"lib1","SARS-CoV-2","ATAACAGTTATAACAA",3,24.76,8.18,-2.59,0.14,2.12,1.02,0.01,">1 nonsynonymous","S41T P161N L188W",3
"lib1","SARS-CoV-2","ATAACATAAAAAAACA",1,5.55,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","F17S R25E D34K V182P",4
"lib1","SARS-CoV-2","ATAACATAAACAAATG",5,0,NA,NA,NA,NA,NA,NA,"stop","F12N F44C K56Y S113* T148R",5
"lib1","SARS-CoV-2","ATAACATAATGCGAAG",3,28.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37F F70K W106G I142S G152H",5
"lib1","SARS-CoV-2","ATAACATACAGCTGAG",2,38.01,9.56,-1.21,0.15,1.84,1.08,0.01,">1 nonsynonymous","P7T V11R F62I",3
"lib1","SARS-CoV-2","ATAACATACATACCGG",2,48.15,9.53,-1.23,0.2,1.59,1.24,0.02,">1 nonsynonymous","C61G I80M K87Y",3
"lib1","SARS-CoV-2","ATAACATACCGACGAA",4,37.7,6.53,-4.24,0.54,1.5,1.17,0.03,">1 nonsynonymous","N4L V37S Y175T",3
"lib1","SARS-CoV-2","ATAACATACGTTAGAA",1,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R E135I N157M",3
"lib1","SARS-CoV-2","ATAACATAGGTACACT",1,8.94,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V52L P96W I104A L122P Q168D A190T",6
"lib1","SARS-CoV-2","ATAACATCACTAGCAG",2,16.96,6,-4.76,2,1.5,1.09,0.01,"1 nonsynonymous","D68L",1
"lib1","SARS-CoV-2","ATAACATCCTCCTTCA",6,70.61,10.54,-0.22,0.08,2.83,1.07,0,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","ATAACATCGTACTAAT",10,121.26,9.67,-1.1,0.08,2.55,1.09,0,">1 nonsynonymous","N13M A42V T63Y F156P",4
"lib1","SARS-CoV-2","ATAACATCTCCACAGC",4,18.78,8.55,-2.22,0.22,1.63,1.12,0.02,">1 nonsynonymous","Y35T N58T N107Q E154I",4
"lib1","SARS-CoV-2","ATAACATGCAATTCGT",2,69.76,10.59,-0.18,0.05,2.91,1.03,0,">1 nonsynonymous","G51N N151H L183I",3
"lib1","SARS-CoV-2","ATAACATTAACAGCAG",6,73.81,10.88,0.12,0.09,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACATTAACCGCAG",17,220.9,10.69,-0.07,0.05,2.93,1.04,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","ATAACATTAGTCAGAT",6,0.98,NA,NA,NA,NA,NA,NA,"stop","S19* L131R",2
"lib1","SARS-CoV-2","ATAACATTGCATGAAA",3,60.56,9.96,-0.81,0.12,2.39,1,0.01,">1 nonsynonymous","C49V N110E",2
"lib1","SARS-CoV-2","ATAACCAAAACAACCA",3,58.16,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6S V77A Y119C G174V",4
"lib1","SARS-CoV-2","ATAACCAAAACTCAGC",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G G83M W106Q C158T Y165F",5
"lib1","SARS-CoV-2","ATAACCAAATAGCACT",1,10.51,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R16A A33T N58I K94Y T201F",5
"lib1","SARS-CoV-2","ATAACCAAATGACTTC",4,28.21,10.22,-0.54,0.1,2.77,1.07,0,"1 nonsynonymous","E10Y",1
"lib1","SARS-CoV-2","ATAACCAACTTTATTA",6,15.87,6,-4.76,1.55,1.5,1.11,0.02,">1 nonsynonymous","F44L T63W W106K",3
"lib1","SARS-CoV-2","ATAACCAATAACGTTT",1,23.28,10.67,-0.09,0.09,2.91,1.01,0,">1 nonsynonymous","V52L L188F",2
"lib1","SARS-CoV-2","ATAACCAATAATTGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14F T100A Y159T G174*",4
"lib1","SARS-CoV-2","ATAACCAATTAAGTAT",3,17.18,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K26Q E76W P96V",3
"lib1","SARS-CoV-2","ATAACCACAAAAAAAC",1,38.63,10.08,-0.68,0.22,2.32,1.15,0.02,">1 nonsynonymous","V37N L111H",2
"lib1","SARS-CoV-2","ATAACCACACTCCGTG",5,49.35,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N1L N92R E154N K199S",4
"lib1","SARS-CoV-2","ATAACCACCAAAGCGC",1,24.95,9.52,-1.24,0.26,1.5,1.18,0.04,">1 nonsynonymous","F12L A105C",2
"lib1","SARS-CoV-2","ATAACCACCTATGACA",6,39.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K56Y N92A Y121M R136E",4
"lib1","SARS-CoV-2","ATAACCACTAAGCTAG",1,12.25,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N107Y L125T C150S G152T",4
"lib1","SARS-CoV-2","ATAACCAGATAACCTT",3,18.35,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6S F62G F99R V181A",4
"lib1","SARS-CoV-2","ATAACCAGGTAAAGTC",11,1.61,NA,NA,NA,NA,NA,NA,"stop","V65* V77N A81I W106S",4
"lib1","SARS-CoV-2","ATAACCATAAATTTCC",4,18.88,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","W23S V103T",2
"lib1","SARS-CoV-2","ATAACCATAACTAGAG",4,38.37,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","R127P G155S Y165R",3
"lib1","SARS-CoV-2","ATAACCATCCAGCGGC",2,117.05,10.46,-0.31,0.04,2.93,1.03,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","ATAACCATGAAATTCA",11,2.31,NA,NA,NA,NA,NA,NA,"stop","V103S N110K Y121L Y175* S184F",5
"lib1","SARS-CoV-2","ATAACCATGGCAAACA",1,35,9.05,-1.71,0.11,2.38,1.08,0.01,">1 nonsynonymous","C6S G83S K87P N120K",4
"lib1","SARS-CoV-2","ATAACCATTGATGCGG",3,18.09,10.72,-0.04,0.13,2.81,1.15,0.01,">1 nonsynonymous","N130H S147A",2
"lib1","SARS-CoV-2","ATAACCCAAATACCCA",1,20.82,9.35,-1.41,0.11,2.76,1.09,0.01,"1 nonsynonymous","G166C",1
"lib1","SARS-CoV-2","ATAACCCAACATAATA",2,65.28,9.81,-0.95,0.14,2.17,1.09,0.01,">1 nonsynonymous","V11D T55L F160A",3
"lib1","SARS-CoV-2","ATAACCCAATAACAAA",6,23.87,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","G9M I88Y",2
"lib1","SARS-CoV-2","ATAACCCACGTGAGCA",7,181.04,10.22,-0.54,0.06,2.8,1.01,0,"1 nonsynonymous","P7I",1
"lib1","SARS-CoV-2","ATAACCCAGAATAATA",3,14.2,10.04,-0.72,0.26,1.67,1.09,0.06,">1 nonsynonymous","F47R F134S T201L",3
"lib1","SARS-CoV-2","ATAACCCAGGACTATC",1,8.51,9.4,-1.36,0.37,1.71,1.21,0.04,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","ATAACCCAGGATATAA",4,20.45,6.03,-4.74,0.64,1.5,1.11,0.01,">1 nonsynonymous","N13H Y35C N120S Y123H N157L",5
"lib1","SARS-CoV-2","ATAACCCATAGCAAAA",5,38.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38R V103S",2
"lib1","SARS-CoV-2","ATAACCCATCCTTTAC",13,2.71,NA,NA,NA,NA,NA,NA,"stop","F12L V103P P149C Y178*",4
"lib1","SARS-CoV-2","ATAACCCCACAATTAT",2,15.21,8.27,-2.5,0.32,1.68,1.25,0.04,">1 nonsynonymous","Q144R P169V Y178C",3
"lib1","SARS-CoV-2","ATAACCCGAATAGTAC",5,54.05,8.57,-2.19,0.14,2.79,1.05,0.01,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","ATAACCCTAGAAATTA",1,11.84,9.97,-0.8,0.15,2.26,1.13,0.01,"1 nonsynonymous","V182T",1
"lib1","SARS-CoV-2","ATAACCCTATCAGGAC",2,22.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161I",1
"lib1","SARS-CoV-2","ATAACCCTTAAAACAC",1,0.41,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib1","SARS-CoV-2","ATAACCGAAAAGGTTT",2,49.83,10.79,0.03,0.07,2.95,1,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","ATAACCGAACCCACCG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35C I104*",2
"lib1","SARS-CoV-2","ATAACCGAATTTCCCA",7,107.96,9.75,-1.02,0.09,2.57,1.09,0,">1 nonsynonymous","K56W P169N",2
"lib1","SARS-CoV-2","ATAACCGACAGGCCCA",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L P96T",2
"lib1","SARS-CoV-2","ATAACCGACGCACGCC",4,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M S41R F47V G116L",4
"lib1","SARS-CoV-2","ATAACCGCAAAATTCA",2,33.01,6.03,-4.73,1.82,1.5,1.22,0.04,">1 nonsynonymous","A14L A22P G83V",3
"lib1","SARS-CoV-2","ATAACCGCAAATTTTC",1,23.15,6.87,-3.9,0.32,1.5,1.06,0.03,">1 nonsynonymous","Y143L C158N",2
"lib1","SARS-CoV-2","ATAACCGGACAGCAGA",1,41.62,10.67,-0.09,0.06,2.9,1.05,0,">1 nonsynonymous","S43Y K128I V173Q S200V",4
"lib1","SARS-CoV-2","ATAACCGGCAGATGCT",2,21.88,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F44L C49R D112W E186N",4
"lib1","SARS-CoV-2","ATAACCGGGTATCAGC",1,36.36,10.52,-0.24,0.07,2.86,1.06,0,">1 nonsynonymous","D97G I104Y",2
"lib1","SARS-CoV-2","ATAACCGTAGCAAACC",2,29.09,6.87,-3.89,0.13,1.5,1.05,0.01,">1 nonsynonymous","P149Y P161D",2
"lib1","SARS-CoV-2","ATAACCGTATAACGAA",6,72.16,6.17,-4.6,0.85,1.5,1.17,0.02,">1 nonsynonymous","R27L F99Y G146M",3
"lib1","SARS-CoV-2","ATAACCGTCATAGAAG",7,72.79,9.95,-0.81,0.07,2.14,1.09,0,">1 nonsynonymous","A18T R127A",2
"lib1","SARS-CoV-2","ATAACCGTCCCTATAC",7,76.8,10.21,-0.56,0.05,2.75,1.01,0,">1 nonsynonymous","D59V P149R Q168A",3
"lib1","SARS-CoV-2","ATAACCGTTCACAATT",4,65.97,6,-4.76,1.76,1.5,1.16,0.01,">1 nonsynonymous","L38Y N107D I138R A145E T201N",5
"lib1","SARS-CoV-2","ATAACCTAATACAAAA",3,48.9,6,-4.76,2,1.5,1.13,0.02,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","ATAACCTAATAGAAAC",2,0.68,NA,NA,NA,NA,NA,NA,"stop","R25* A105S N130A",3
"lib1","SARS-CoV-2","ATAACCTAATCGCCAG",4,103.97,10.18,-0.58,0.07,2.99,1,0,">1 nonsynonymous","C61F K87M",2
"lib1","SARS-CoV-2","ATAACCTAATTTCCCA",6,18.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I V20I Q84D L122W",4
"lib1","SARS-CoV-2","ATAACCTACTTAGTCT",1,37.06,8.35,-2.41,0.13,1.76,1.16,0.01,">1 nonsynonymous","F8W A33P V52D K87G N130L",5
"lib1","SARS-CoV-2","ATAACCTAGGCCTCTG",1,16.08,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y159C P169C",2
"lib1","SARS-CoV-2","ATAACCTATATTCGAA",1,48.71,9.8,-0.96,0.04,2.83,1.09,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","ATAACCTATCTTTCCA",2,32.64,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","R73T K128Y N151I Y178S",4
"lib1","SARS-CoV-2","ATAACCTATGCTGTCT",3,25.22,10.38,-0.38,0.09,2.74,1.04,0,">1 nonsynonymous","A18R A42R N130F",3
"lib1","SARS-CoV-2","ATAACCTGCGTGACCA",1,26.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F47S N157T Q163G",3
"lib1","SARS-CoV-2","ATAACCTGGCATTTTG",4,26.1,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","D59W G74T G101P I142N",4
"lib1","SARS-CoV-2","ATAACCTGTCTCTGAA",1,17.87,6,-4.76,1.7,1.5,1.2,0.03,">1 nonsynonymous","S19M V37I S43K I142N G166T",5
"lib1","SARS-CoV-2","ATAACCTTAAAAATTC",1,8.97,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F8H D68A G83R D98M N107S",5
"lib1","SARS-CoV-2","ATAACCTTAAAAGTCA",11,70.38,10.57,-0.19,0.06,2.91,1.07,0,"1 nonsynonymous","D98Q",1
"lib1","SARS-CoV-2","ATAACCTTAAAGGTCG",4,105.03,9.65,-1.11,0.1,1.87,1.13,0,">1 nonsynonymous","N64T W106I N151C",3
"lib1","SARS-CoV-2","ATAACCTTTAGACTTC",4,69.37,10.8,0.03,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACCTTTTATCAAA",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K P149T",2
"lib1","SARS-CoV-2","ATAACCTTTTGTAGGT",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M L60F G86L D98V F160V",5
"lib1","SARS-CoV-2","ATAACGAAACATCTTC",7,16.54,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","V182K",1
"lib1","SARS-CoV-2","ATAACGAACAGTACCG",2,36.22,6.14,-4.63,0.71,1.5,1.13,0.02,">1 nonsynonymous","I2T C31R Y119V F156D T170S",5
"lib1","SARS-CoV-2","ATAACGAACGTAAACG",2,68.97,10.56,-0.2,0.05,2.84,1.04,0,">1 nonsynonymous","L5E Y66S",2
"lib1","SARS-CoV-2","ATAACGAATGAACAAA",4,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K A42N",2
"lib1","SARS-CoV-2","ATAACGACAAACTTGA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","L57N D98* K198L",3
"lib1","SARS-CoV-2","ATAACGACCCCCAAAA",8,138.27,10.79,0.02,0.07,2.86,1.07,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","ATAACGACCTCAATGG",9,84.79,7.94,-2.82,0.18,1.82,1.1,0.01,"1 nonsynonymous","D112A",1
"lib1","SARS-CoV-2","ATAACGACCTGGTAAA",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S C49L N120L R127F",4
"lib1","SARS-CoV-2","ATAACGAGAAAACAAA",9,82.65,10.77,0,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACGAGAACCCCAT",1,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114M",1
"lib1","SARS-CoV-2","ATAACGAGATATGAGC",4,1.6,NA,NA,NA,NA,NA,NA,"stop","A14C F44K Q84A K94I P177*",5
"lib1","SARS-CoV-2","ATAACGAGATTTCAAA",1,27.21,10.79,0.03,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACGATAACCTAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","ATAACGATAGTAGAGT",6,33.62,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y35R G86T L122P",3
"lib1","SARS-CoV-2","ATAACGATCGACGAAT",4,32.07,6.22,-4.55,0.85,1.5,1.18,0.03,">1 nonsynonymous","D34G G51E",2
"lib1","SARS-CoV-2","ATAACGATGCAATCAT",2,20.45,10.86,0.1,0.06,2.98,1.01,0,"1 nonsynonymous","D97G",1
"lib1","SARS-CoV-2","ATAACGCACCCCCTGA",3,17.56,6,-4.76,1.33,1.5,1.22,0.03,">1 nonsynonymous","S45V C61D I80L Q84V G146S",5
"lib1","SARS-CoV-2","ATAACGCAGTTACACT",6,0,NA,NA,NA,NA,NA,NA,"stop","I28* C49K T100L",3
"lib1","SARS-CoV-2","ATAACGCCCTCCATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N P96S N107K C150S T201Q",5
"lib1","SARS-CoV-2","ATAACGCCTACTTAGA",6,110.4,8.19,-2.58,0.18,1.61,1.16,0.01,">1 nonsynonymous","L60V Q176G",2
"lib1","SARS-CoV-2","ATAACGCGATCAGATG",9,109.22,10.65,-0.12,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACGCGATCATAAC",7,102.7,10.77,0.01,0.05,2.89,1.06,0,">1 nonsynonymous","L5S V153Y",2
"lib1","SARS-CoV-2","ATAACGCGCAAGATTA",2,0.49,NA,NA,NA,NA,NA,NA,"stop","P54H V65E S108* Q163T",4
"lib1","SARS-CoV-2","ATAACGCTCATGAGTA",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M A42L K48S N64S P161Y",5
"lib1","SARS-CoV-2","ATAACGGAAACTATTA",1,24.95,10.9,0.13,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACGGAACAGTCTT",4,1.27,NA,NA,NA,NA,NA,NA,"stop","P7N V32* N107L G172A",4
"lib1","SARS-CoV-2","ATAACGGACTATCCAG",1,20.51,6.02,-4.74,0.43,2.13,1.1,0,">1 nonsynonymous","E10K P96I K128M G196I",4
"lib1","SARS-CoV-2","ATAACGGATCCCCTCC",6,22.07,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41R F47R G86P P149E Q163L",5
"lib1","SARS-CoV-2","ATAACGGCTAGACCTA",1,27.35,10.83,0.07,0.08,2.92,1.05,0,"1 nonsynonymous","H189L",1
"lib1","SARS-CoV-2","ATAACGGGAATGCATA",4,87.82,10.12,-0.65,0.06,2.82,1.07,0,">1 nonsynonymous","G174F A190L",2
"lib1","SARS-CoV-2","ATAACGGGTCCACATG",3,34.5,6,-4.76,1.53,1.5,1.22,0.03,">1 nonsynonymous","S36L C61F E76G S184N",4
"lib1","SARS-CoV-2","ATAACGGTGATGGAAA",6,45.37,6.15,-4.62,0.91,1.5,1.15,0.03,">1 nonsynonymous","C6V T100M C158K",3
"lib1","SARS-CoV-2","ATAACGTAGCCAGATG",5,28.82,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W106N K114F G172C",3
"lib1","SARS-CoV-2","ATAACGTAGGAAACAC",1,14.97,8.07,-2.69,0.2,2.03,1.12,0.02,">1 nonsynonymous","A33E N40P Y119A G166H",4
"lib1","SARS-CoV-2","ATAACGTAGTTTACCT",2,42.77,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","C102L S113K E154S",3
"lib1","SARS-CoV-2","ATAACGTCAAAGCAGT",4,20.78,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16T F99E E141S G155L P197G",5
"lib1","SARS-CoV-2","ATAACGTCCCTTTCGT",2,29.48,10.5,-0.27,0.07,2.83,1.07,0,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","ATAACGTGATAGCAAG",3,72.01,10.71,-0.06,0.06,2.9,1.06,0,">1 nonsynonymous","I2S N151L",2
"lib1","SARS-CoV-2","ATAACGTTAAGCGCCT",2,12.26,7.03,-3.73,0.55,1.5,1.14,0.07,">1 nonsynonymous","V103M Y119E Y159H",3
"lib1","SARS-CoV-2","ATAACGTTCCTTCCGC",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C158I T201Y",2
"lib1","SARS-CoV-2","ATAACTAAATAAATAT",1,13.42,7.62,-3.14,0.33,1.5,1.05,0.06,">1 nonsynonymous","N58L N107H",2
"lib1","SARS-CoV-2","ATAACTAAGTTAGTAT",5,98.66,6.21,-4.55,0.8,1.5,1.22,0.02,">1 nonsynonymous","A42E N120W R127L",3
"lib1","SARS-CoV-2","ATAACTAATCGCCGTT",6,29.81,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","T15P P96L Y119V G174N",4
"lib1","SARS-CoV-2","ATAACTAATGAGCCAC",5,29.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N64V T85I Y121S C158G",4
"lib1","SARS-CoV-2","ATAACTAATGATTCTT",3,17.66,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I2G S36R D98V V103M L131G T170V",6
"lib1","SARS-CoV-2","ATAACTAATTCGGCTT",1,0.8,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib1","SARS-CoV-2","ATAACTAATTTAATGA",2,0,NA,NA,NA,NA,NA,NA,"stop","W23* Y91Q T148L R179W",4
"lib1","SARS-CoV-2","ATAACTACAAAAAAAA",4,90.09,10.26,-0.51,0.05,2.93,1,0,">1 nonsynonymous","F70M H189N",2
"lib1","SARS-CoV-2","ATAACTACAAAATGAA",3,25.3,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G83E D97H C102Y A190T",4
"lib1","SARS-CoV-2","ATAACTACAGTGTGTG",1,18.37,6,-4.76,2,1.66,1.21,0.02,">1 nonsynonymous","V77G N110S Y165C F167R G174A T201L",6
"lib1","SARS-CoV-2","ATAACTACATAGACAA",3,3.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","ATAACTACCTTCCCAA",2,22.09,10.22,-0.54,0.08,2.68,1,0.01,">1 nonsynonymous","A14H S41I",2
"lib1","SARS-CoV-2","ATAACTACGTGCGAGT",3,0.06,NA,NA,NA,NA,NA,NA,"stop","V37L I142* Q144R G174T",4
"lib1","SARS-CoV-2","ATAACTACTGATACGC",1,0.14,NA,NA,NA,NA,NA,NA,"stop","L5V K87* D97S V103S S129I Y143* Y165L",7
"lib1","SARS-CoV-2","ATAACTACTTGCGCAA",3,63.44,10.02,-0.75,0.06,2.82,1.03,0,">1 nonsynonymous","N30F Y121L",2
"lib1","SARS-CoV-2","ATAACTAGAAAGTCTA",6,45.58,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y93S G166W",2
"lib1","SARS-CoV-2","ATAACTAGGCTTACTT",1,15.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94L Q144L G152S",3
"lib1","SARS-CoV-2","ATAACTAGGTGCATGT",1,29.11,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S19T Q84S P96N Q163R V173T",5
"lib1","SARS-CoV-2","ATAACTAGTTTATGAC",2,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P L60D F167S",3
"lib1","SARS-CoV-2","ATAACTATATTAACTT",7,207.94,10.55,-0.21,0.05,2.88,1.04,0,">1 nonsynonymous","D90W I138L T201D",3
"lib1","SARS-CoV-2","ATAACTATGGCAGGTA",2,83.74,10.61,-0.15,0.06,2.94,1.01,0,">1 nonsynonymous","T3A S41R N120K T201D",4
"lib1","SARS-CoV-2","ATAACTATTAAACAAA",4,34.93,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","N107I E141L F185L",3
"lib1","SARS-CoV-2","ATAACTATTAAATAAA",1,36.96,10.22,-0.55,0.06,2.91,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","ATAACTATTAAGATAA",3,22.1,9,-1.77,0.31,1.5,1.04,0.05,">1 nonsynonymous","A14T G83V D98E",3
"lib1","SARS-CoV-2","ATAACTCAACAGAATT",8,18.24,6,-4.76,1.63,3,1.24,0.01,">1 nonsynonymous","D34C A105R P161R C195K",4
"lib1","SARS-CoV-2","ATAACTCACACCCCGT",4,43.83,7.09,-3.67,0.36,1.5,1.2,0.03,">1 nonsynonymous","W23V Y39K D90S E141S",4
"lib1","SARS-CoV-2","ATAACTCTATAGCGAA",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I G86I G117L",3
"lib1","SARS-CoV-2","ATAACTCTCGACCTTA",1,27.42,10.65,-0.12,0.07,2.9,1.04,0,">1 nonsynonymous","R16D S129K P149Y",3
"lib1","SARS-CoV-2","ATAACTGAATCTGAGG",4,20.02,8.13,-2.63,0.46,1.5,1.08,0.08,">1 nonsynonymous","T3L R136K F185N",3
"lib1","SARS-CoV-2","ATAACTGACGACTCAT",4,76.63,10.15,-0.61,0.03,2.95,1,0,">1 nonsynonymous","G9N N64S K114G N120S",4
"lib1","SARS-CoV-2","ATAACTGAGCTGAGAG",6,76.47,10.73,-0.04,0.07,2.85,1.1,0,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","ATAACTGATAACTCAT",1,20.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S Y50Q",2
"lib1","SARS-CoV-2","ATAACTGATCAAAAAT",7,46.01,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15I V37H T100P I138V",4
"lib1","SARS-CoV-2","ATAACTGCAAGGGACC",6,70.41,10.66,-0.11,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACTGCAGCTTATC",1,33.86,7.76,-3,0.34,1.5,1.02,0.03,">1 nonsynonymous","F44T I104Q",2
"lib1","SARS-CoV-2","ATAACTGCGCAAATTG",2,0.48,NA,NA,NA,NA,NA,NA,"stop","I2D K56S F167* P177Q V182* H189P",6
"lib1","SARS-CoV-2","ATAACTGCTACGTCCA",4,57.41,9.85,-0.91,0.07,2.63,1.01,0,">1 nonsynonymous","Y35L P54M Q79L N151F A190E",5
"lib1","SARS-CoV-2","ATAACTGGACGAATTT",5,0.5,NA,NA,NA,NA,NA,NA,"stop","L57R L95* N120I",3
"lib1","SARS-CoV-2","ATAACTGGCCCGAATC",3,65.13,9.59,-1.18,0.08,2.76,1.04,0,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","ATAACTGGTAAAGAAG",4,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y K114R L125F G166C",4
"lib1","SARS-CoV-2","ATAACTGTATATTTTC",7,36.68,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K56P D112H",2
"lib1","SARS-CoV-2","ATAACTGTGAGGTATC",3,81.81,9.93,-0.83,0.07,2.06,1.05,0,">1 nonsynonymous","I2K A105H",2
"lib1","SARS-CoV-2","ATAACTGTTAGAATAT",4,8.17,9.17,-1.6,0.53,1.5,1,0.07,">1 nonsynonymous","S19T R25T A105G S139Q N157H",5
"lib1","SARS-CoV-2","ATAACTTATGGCCTAA",1,52,10.84,0.08,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAACTTCCGACAACA",4,18.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATAACTTCGATCCTTA",5,28.04,6.29,-4.47,0.47,1.5,1.15,0.01,">1 nonsynonymous","K56A D97W V103M",3
"lib1","SARS-CoV-2","ATAACTTGGTGGCTTT",11,111.05,9.07,-1.69,0.13,1.61,1.14,0.01,">1 nonsynonymous","C6M W106I",2
"lib1","SARS-CoV-2","ATAACTTTATTTAGGC",10,46.72,6.27,-4.49,0.6,1.5,1.17,0.03,">1 nonsynonymous","T3S C61S F99S P133R",4
"lib1","SARS-CoV-2","ATAACTTTTGAAAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* F62E Y91C",3
"lib1","SARS-CoV-2","ATAAGAAACAGGCAAA",2,7.03,9.69,-1.08,0.34,2.57,1,0.02,">1 nonsynonymous","I28C S41P",2
"lib1","SARS-CoV-2","ATAAGAAACGCCCTAA",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M A42F C61I I88Y N107T T201M",6
"lib1","SARS-CoV-2","ATAAGAAACGTTTAAG",1,18.08,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33R C61I D68M N151K",4
"lib1","SARS-CoV-2","ATAAGAAAGCAATACG",2,12.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86T E135N G155S",3
"lib1","SARS-CoV-2","ATAAGAAATCGCCGAA",8,164.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91R Y178I",2
"lib1","SARS-CoV-2","ATAAGAAATCTAGTAT",1,20.84,9.87,-0.89,0.09,2.82,1.08,0,">1 nonsynonymous","L5N S41E N171G",3
"lib1","SARS-CoV-2","ATAAGAAATTAAGTTT",1,16.85,10.82,0.06,0.09,2.88,1.07,0,"1 nonsynonymous","V115P",1
"lib1","SARS-CoV-2","ATAAGAACAACTTAGA",16,207.56,9.16,-1.6,0.07,2.82,1.11,0,">1 nonsynonymous","I28L K114L Y119I",3
"lib1","SARS-CoV-2","ATAAGAACAGAGTTAG",4,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q G146W",2
"lib1","SARS-CoV-2","ATAAGAACAGTAATAC",6,72.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9L R73W Y143V S164I K198Y",5
"lib1","SARS-CoV-2","ATAAGAACCAAAGAAG",4,31.79,6,-4.76,2,1.5,1.39,0.05,">1 nonsynonymous","W23V A67N D97T D112Q A145L T170A",6
"lib1","SARS-CoV-2","ATAAGAACCTAACGTA",1,2.13,NA,NA,NA,NA,NA,NA,"stop","D34N Y119*",2
"lib1","SARS-CoV-2","ATAAGAACCTATACAG",2,1.03,NA,NA,NA,NA,NA,NA,"stop","N13P G86* P96R D112S Q144R",5
"lib1","SARS-CoV-2","ATAAGAACGCGGATTG",4,20.03,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N64D D97V W106V E154Y",4
"lib1","SARS-CoV-2","ATAAGAACGTAGGCCG",3,23.91,10.91,0.14,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGAACTGTGATAT",3,10.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95A L122Q",2
"lib1","SARS-CoV-2","ATAAGAAGATATACAA",5,16.04,9.31,-1.46,0.16,2.02,1.06,0.02,">1 nonsynonymous","F44S S139D G174W",3
"lib1","SARS-CoV-2","ATAAGAAGGAATTACA",3,9.01,10.14,-0.62,0.22,2.69,1.13,0.02,">1 nonsynonymous","K48S D90T",2
"lib1","SARS-CoV-2","ATAAGAAGTAACCTAG",1,32.92,10.71,-0.05,0.07,2.89,1.07,0,">1 nonsynonymous","L122G K128M",2
"lib1","SARS-CoV-2","ATAAGAAGTTACATTA",1,9.44,9.72,-1.05,0.13,1.92,1.01,0,">1 nonsynonymous","A18I S41W",2
"lib1","SARS-CoV-2","ATAAGAATAATAAACC",2,17.2,6.84,-3.93,0.5,1.5,1.19,0.05,">1 nonsynonymous","D90G D98A V103R",3
"lib1","SARS-CoV-2","ATAAGAATATATCCCT",1,40.38,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Q84F N107F G146V",3
"lib1","SARS-CoV-2","ATAAGAATCATATAAG",2,20.38,6,-4.76,0.63,2.88,1.1,0.01,">1 nonsynonymous","K114G R127V E135N",3
"lib1","SARS-CoV-2","ATAAGAATGCCTCGAT",1,0.9,NA,NA,NA,NA,NA,NA,"stop","T15A S19Y K48* A81V A89T P96V",6
"lib1","SARS-CoV-2","ATAAGAATGTTATCAG",7,32.49,6,-4.76,1.35,1.5,1.18,0.01,">1 nonsynonymous","V115S R127P",2
"lib1","SARS-CoV-2","ATAAGAATTCCGTCTA",7,59.65,9.19,-1.58,0.13,1.71,1.15,0.01,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","ATAAGACAAAAGTTAA",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89H K94E T170R",3
"lib1","SARS-CoV-2","ATAAGACAAAGACAGT",4,48.31,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F8H F47S R124H N130A",4
"lib1","SARS-CoV-2","ATAAGACAACAACGGC",3,59.9,10.7,-0.07,0.06,2.92,1.06,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","ATAAGACAAGTTATGG",3,1.17,NA,NA,NA,NA,NA,NA,"stop","I2L T55D D97* I138F",4
"lib1","SARS-CoV-2","ATAAGACAGCAACTCA",3,5.77,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6V N13M P82H",3
"lib1","SARS-CoV-2","ATAAGACCACCTTTAA",5,55.82,7.94,-2.83,0.35,1.5,1.08,0.06,">1 nonsynonymous","P54F F62T L95N G155F",4
"lib1","SARS-CoV-2","ATAAGACCCTACTTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","ATAAGACCGCAACATA",2,12.53,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L5V Y50P Y91P",3
"lib1","SARS-CoV-2","ATAAGACCGGCCCACA",1,18.73,10.82,0.06,0.08,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGACCTAAAGAAA",1,1.83,NA,NA,NA,NA,NA,NA,"stop","A18R K48E G101C L125T F156*",5
"lib1","SARS-CoV-2","ATAAGACCTAGCACTT",5,16.27,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N58L D90I G172F V181L",4
"lib1","SARS-CoV-2","ATAAGACGAAATGACT",1,26.38,8.61,-2.16,0.14,1.63,1.04,0.01,">1 nonsynonymous","N4D V11S K56E N107S",4
"lib1","SARS-CoV-2","ATAAGACGAGCTTAAA",1,5.67,NA,NA,NA,NA,NA,NA,"stop","T63A A105C T140D Y143*",4
"lib1","SARS-CoV-2","ATAAGACGGTAAATCA",3,46.83,8.29,-2.47,0.16,2.1,1.13,0.01,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","ATAAGACGTATAAACG",2,60.53,8.72,-2.04,0.09,2.87,1.02,0,">1 nonsynonymous","S43Y K132R F160Q T170V",4
"lib1","SARS-CoV-2","ATAAGACTACGCTCGT",5,63.15,10.15,-0.61,0.08,2.76,1.04,0,">1 nonsynonymous","S45W Y143F T201S",3
"lib1","SARS-CoV-2","ATAAGACTGGTGAGTT",3,7.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A42L F99P",3
"lib1","SARS-CoV-2","ATAAGACTGTCTCGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S D68G A89T",3
"lib1","SARS-CoV-2","ATAAGAGAATAAATCT",3,21.96,6.17,-4.6,0.92,1.5,1.16,0.03,">1 nonsynonymous","C49V R73K N109Y Y178P",4
"lib1","SARS-CoV-2","ATAAGAGAATCTGAAA",3,78.46,10.55,-0.22,0.04,2.93,1.02,0,">1 nonsynonymous","V37H C61L P149S",3
"lib1","SARS-CoV-2","ATAAGAGAGGTATACC",4,6.77,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13V A105P Y119V",3
"lib1","SARS-CoV-2","ATAAGAGAGTATCCAA",2,57.22,10.51,-0.26,0.05,2.91,1.03,0,">1 nonsynonymous","L5A Y39S N151I",3
"lib1","SARS-CoV-2","ATAAGAGATACACTTT",4,39.03,9.4,-1.36,0.07,2.8,1.11,0,">1 nonsynonymous","N118S E154D",2
"lib1","SARS-CoV-2","ATAAGAGATGATTTCC",5,39.22,8.77,-1.99,0.19,1.71,1.12,0.01,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","ATAAGAGCATGGGAGT",3,101.37,9.67,-1.1,0.1,1.92,1.07,0,">1 nonsynonymous","F44T L57A N64P",3
"lib1","SARS-CoV-2","ATAAGAGCGAAGAGAT",1,20.56,8.44,-2.33,0.3,1.5,1.19,0.04,">1 nonsynonymous","A89F Y143S T170P",3
"lib1","SARS-CoV-2","ATAAGAGGCAATACTA",4,30.39,8.82,-1.94,0.16,2.14,1.13,0.01,">1 nonsynonymous","A14R G146M",2
"lib1","SARS-CoV-2","ATAAGAGTAATTACAA",3,45.88,6.24,-4.52,0.28,1.5,1.09,0,">1 nonsynonymous","R25A P82K K128D T170N",4
"lib1","SARS-CoV-2","ATAAGAGTACAAACAA",8,88,10.44,-0.33,0.06,2.83,1.02,0,">1 nonsynonymous","S43R D97G S139C",3
"lib1","SARS-CoV-2","ATAAGAGTCAAGCAGT",3,115.37,10.61,-0.15,0.05,2.88,1.06,0,"1 nonsynonymous","T63G",1
"lib1","SARS-CoV-2","ATAAGAGTGCCACTCG",2,63.57,9.96,-0.8,0.06,2.64,1.07,0,">1 nonsynonymous","L38F Q84N A192T",3
"lib1","SARS-CoV-2","ATAAGAGTTAGGTAAC",10,189.31,9.03,-1.73,0.1,1.99,1.12,0,">1 nonsynonymous","V37L N64A Y91E",3
"lib1","SARS-CoV-2","ATAAGAGTTCGCCCAA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","P7E F17E K56W W106* V115M L122K",6
"lib1","SARS-CoV-2","ATAAGATAAAAGCCAT",7,53.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R G146W",2
"lib1","SARS-CoV-2","ATAAGATAAAGAAGGT",1,6.19,9.63,-1.13,0.29,2.2,1.02,0.01,">1 nonsynonymous","S41V L57S N151L",3
"lib1","SARS-CoV-2","ATAAGATAAGTGTCCA",2,17.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3V T55V A89L T100S Y165L",5
"lib1","SARS-CoV-2","ATAAGATAATGCAGGG",2,22.24,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","S36M C102P S108V",3
"lib1","SARS-CoV-2","ATAAGATACAAACGAG",5,52.89,10.74,-0.03,0.06,2.93,1.06,0,"1 nonsynonymous","T46K",1
"lib1","SARS-CoV-2","ATAAGATACATCACCA",5,57.15,10.42,-0.35,0.07,2.82,1,0,">1 nonsynonymous","A14M P149T",2
"lib1","SARS-CoV-2","ATAAGATACCCATCCT",3,42.02,10.53,-0.23,0.06,2.89,1,0,">1 nonsynonymous","T3K T55R L95M",3
"lib1","SARS-CoV-2","ATAAGATAGCTCCAAA",5,93.81,10.59,-0.17,0.05,2.92,1.07,0,">1 nonsynonymous","A33M A42Q",2
"lib1","SARS-CoV-2","ATAAGATCGCATTCAA",8,85.18,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S45M C150Y",2
"lib1","SARS-CoV-2","ATAAGATGACTAAGTA",6,28.05,8.85,-1.91,0.16,1.54,1.09,0.01,">1 nonsynonymous","F12K A42L",2
"lib1","SARS-CoV-2","ATAAGATGGTACTCCG",2,33.95,10.34,-0.42,0.09,2.74,1,0,">1 nonsynonymous","S43V P133N",2
"lib1","SARS-CoV-2","ATAAGATTAACTAAAG",11,168.92,10.73,-0.03,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGATTAATAACAA",1,32.65,9.08,-1.68,0.15,2.17,1.03,0.01,">1 nonsynonymous","G74L K198L",2
"lib1","SARS-CoV-2","ATAAGATTCACAAAAA",1,2.53,NA,NA,NA,NA,NA,NA,"stop","G9V K26* S113P Y165A",4
"lib1","SARS-CoV-2","ATAAGATTCTACCCAC",3,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71E K128C",2
"lib1","SARS-CoV-2","ATAAGATTGCGTGAAA",4,49.47,10.77,0,0.08,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGATTTGTATTAA",5,78.16,10.81,0.05,0.09,2.94,1.04,0,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","ATAAGCAAAAACTAAT",2,69.97,10.58,-0.19,0.06,2.89,1,0,"1 nonsynonymous","L38M",1
"lib1","SARS-CoV-2","ATAAGCAAACGGAGAG",4,78.61,8.64,-2.12,0.12,2.13,1.07,0.01,">1 nonsynonymous","N120A P133Q T170R",3
"lib1","SARS-CoV-2","ATAAGCAAACGGATAG",1,10.73,6,-4.76,1.72,1.5,1.28,0.02,">1 nonsynonymous","C61G G86K E141G",3
"lib1","SARS-CoV-2","ATAAGCAAAGAATGCA",1,24.91,8.97,-1.8,0.23,2.04,1.28,0.02,">1 nonsynonymous","E135M P161S",2
"lib1","SARS-CoV-2","ATAAGCAAATTTAGTT",7,86.89,10.25,-0.52,0.06,2.83,1.03,0,">1 nonsynonymous","R27K Y35S N64T D97G",4
"lib1","SARS-CoV-2","ATAAGCACCCAGGCTG",3,14.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88G K94S Y119T V153G",4
"lib1","SARS-CoV-2","ATAAGCACCTACGACA",1,22.25,7.76,-3,0.31,1.69,1.08,0.04,"1 nonsynonymous","Q176Y",1
"lib1","SARS-CoV-2","ATAAGCACCTTGACAT",2,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L T15K S19E A33E G155F",5
"lib1","SARS-CoV-2","ATAAGCACTAACACAT",2,33.69,8.65,-2.11,0.2,1.5,1.11,0.02,">1 nonsynonymous","A105K H189P",2
"lib1","SARS-CoV-2","ATAAGCACTACCCAGA",1,55.67,10.38,-0.39,0.04,2.82,1.05,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","ATAAGCACTTGACAAA",1,29.45,8.14,-2.63,0.2,1.77,1.13,0.01,">1 nonsynonymous","K56Q N107L T140I",3
"lib1","SARS-CoV-2","ATAAGCAGATAGCATA",1,19.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P82V P149D F167G V173C",4
"lib1","SARS-CoV-2","ATAAGCAGGTTGGTAT",4,50.25,10.2,-0.56,0.09,2.75,1.03,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","ATAAGCAGGTTTTTGA",4,49.57,9.9,-0.87,0.21,1.71,1.17,0.02,">1 nonsynonymous","N1P Y66F Q163Y Q176R",4
"lib1","SARS-CoV-2","ATAAGCAGTTCTAAAG",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A P54G",2
"lib1","SARS-CoV-2","ATAAGCATCATATCAA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","D59L G101* N110G G116H",4
"lib1","SARS-CoV-2","ATAAGCATCTGTAAAC",2,9.19,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N64S N92R N120G",3
"lib1","SARS-CoV-2","ATAAGCATGGGGGGTA",1,27.33,10.61,-0.16,0.09,2.89,1.07,0,">1 nonsynonymous","N64K P149H",2
"lib1","SARS-CoV-2","ATAAGCATTATTTGAG",6,18.05,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A105E C158G T201D",3
"lib1","SARS-CoV-2","ATAAGCCAAAAAAAAT",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L P161D",2
"lib1","SARS-CoV-2","ATAAGCCAACAGGAAT",12,217.07,10.25,-0.52,0.03,2.83,1.01,0,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","ATAAGCCACTGGAACA",5,164.52,10.73,-0.03,0.05,2.91,1.05,0,">1 nonsynonymous","K132Q L187S",2
"lib1","SARS-CoV-2","ATAAGCCATAGAAGTC",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S F62C",2
"lib1","SARS-CoV-2","ATAAGCCATCTTGACG",2,12.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A81K K114L P177S",3
"lib1","SARS-CoV-2","ATAAGCCATTTATAAT",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S D34W P96L I104F",4
"lib1","SARS-CoV-2","ATAAGCCCAGGATACA",5,25.88,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14S C49P P133R",3
"lib1","SARS-CoV-2","ATAAGCCCATTATCTG",6,32.94,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","P82Y G172V",2
"lib1","SARS-CoV-2","ATAAGCCCCAGGTTAC",4,53.04,8.8,-1.96,0.07,2.91,1.09,0,"1 nonsynonymous","G166Y",1
"lib1","SARS-CoV-2","ATAAGCCTAAGCCCGT",2,8.37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F70I D90S G116F",3
"lib1","SARS-CoV-2","ATAAGCCTCAAGTTTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","ATAAGCCTTCATACTG",1,20.34,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G9M Y35H Y50S",3
"lib1","SARS-CoV-2","ATAAGCGACTATCGGT",4,43.3,6.05,-4.72,1.21,1.5,1.16,0.03,">1 nonsynonymous","K87D L95W",2
"lib1","SARS-CoV-2","ATAAGCGATCACTACA",9,165.71,10.77,0,0.05,2.86,1.09,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","ATAAGCGATCGCCATG",3,13.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D112V R124S R136W F167R",4
"lib1","SARS-CoV-2","ATAAGCGATGTAGAGA",3,102.02,10.6,-0.16,0.05,2.94,1.01,0,"1 nonsynonymous","A67C",1
"lib1","SARS-CoV-2","ATAAGCGCACCCGCAT",3,13.69,6.18,-4.59,0.32,3,1.08,0,">1 nonsynonymous","R124W Y159F S200Q",3
"lib1","SARS-CoV-2","ATAAGCGCAGTATTGA",1,15.45,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","A81P F167H Y178R",3
"lib1","SARS-CoV-2","ATAAGCGCATAATAAG",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D R27M Y50L",3
"lib1","SARS-CoV-2","ATAAGCGCCGCCAATC",4,8.3,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A14M K87E S113D",3
"lib1","SARS-CoV-2","ATAAGCGGCTGAATGA",6,42.73,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","N4R V37Q C49K K56T V115L",5
"lib1","SARS-CoV-2","ATAAGCGTATGCCAAG",2,0.38,NA,NA,NA,NA,NA,NA,"stop","E10P D98* L122F N130L S147I",5
"lib1","SARS-CoV-2","ATAAGCGTTAAGGCAG",1,0.45,NA,NA,NA,NA,NA,NA,"stop","C6L R25L E141R C150T P169*",5
"lib1","SARS-CoV-2","ATAAGCTAAAGTTTAA",3,27.55,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F17T I28D L57C F99I C158L",5
"lib1","SARS-CoV-2","ATAAGCTACAAGGGTT",2,5.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N N120L G152H L162I",4
"lib1","SARS-CoV-2","ATAAGCTACCACACCA",1,11.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q F99A",2
"lib1","SARS-CoV-2","ATAAGCTACCTAACTG",9,41.86,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37E F99R",2
"lib1","SARS-CoV-2","ATAAGCTCATTTAGTG",2,9.29,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","L60A T63K D68L R136L",4
"lib1","SARS-CoV-2","ATAAGCTGAAACCCCA",1,30.12,6,-4.76,2,1.5,1.24,0.04,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","ATAAGCTGAAATACCA",7,30.1,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","I88F C102T S184H",3
"lib1","SARS-CoV-2","ATAAGCTTTGCACTCT",2,11.71,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","P82E W106Q N151I",3
"lib1","SARS-CoV-2","ATAAGGAAAAACCAAC",8,67.7,6.41,-4.35,0.58,1.5,1.2,0.02,">1 nonsynonymous","T85G V115M I142R E154C",4
"lib1","SARS-CoV-2","ATAAGGAAAACCCTAT",4,20.63,6.39,-4.38,0.67,1.5,1.2,0.04,">1 nonsynonymous","A33L F99N",2
"lib1","SARS-CoV-2","ATAAGGAACGCGGACA",4,90.22,8.14,-2.63,0.21,1.5,1.2,0.02,"1 nonsynonymous","W23K",1
"lib1","SARS-CoV-2","ATAAGGAAGGCCCTGA",4,111.94,10.37,-0.39,0.06,2.9,1.03,0,">1 nonsynonymous","Y91F F156L",2
"lib1","SARS-CoV-2","ATAAGGAATTTATGTG",3,47.31,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44N L57T N107L Y119D N151L F160G G166V",7
"lib1","SARS-CoV-2","ATAAGGAATTTTTACG",6,89.45,10.3,-0.47,0.12,2.57,1.07,0,">1 nonsynonymous","C61Y N130Y",2
"lib1","SARS-CoV-2","ATAAGGACAGCAATTG",5,2.06,NA,NA,NA,NA,NA,NA,"stop","S45T D112E R124*",3
"lib1","SARS-CoV-2","ATAAGGACCATGAAAG",7,121.87,10.68,-0.08,0.03,2.94,1.04,0,"1 nonsynonymous","K48V",1
"lib1","SARS-CoV-2","ATAAGGACGGTAACCT",3,26.76,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F12T L38P G117S T170R",4
"lib1","SARS-CoV-2","ATAAGGAGCAGAGAGA",2,76.93,10.3,-0.47,0.05,2.93,1,0,"1 nonsynonymous","K48F",1
"lib1","SARS-CoV-2","ATAAGGAGCCCACTAC",2,22.36,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2D G83W D90R L111G G152S V173S",6
"lib1","SARS-CoV-2","ATAAGGATAAACTTCA",2,0.68,NA,NA,NA,NA,NA,NA,"stop","N4* Y119H",2
"lib1","SARS-CoV-2","ATAAGGATAACAGTAA",2,52.19,10.19,-0.57,0.06,2.74,1,0,">1 nonsynonymous","I2A D90I",2
"lib1","SARS-CoV-2","ATAAGGATACGCTTAT",10,44.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G116S R127P P149C",3
"lib1","SARS-CoV-2","ATAAGGATCGCCTCTT",1,9.43,10.42,-0.34,0.09,2.83,1.15,0,">1 nonsynonymous","A33Y S41R",2
"lib1","SARS-CoV-2","ATAAGGATGATTCAAA",2,10.22,6.83,-3.93,0.4,1.5,1.08,0.02,">1 nonsynonymous","G101S I142R",2
"lib1","SARS-CoV-2","ATAAGGATGCTCTGTA",2,64.26,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V11A F47D T63E K94Q K199S",5
"lib1","SARS-CoV-2","ATAAGGATGGTACCAC",2,28.7,10.81,0.05,0.1,2.91,1.07,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","ATAAGGATGTAAGCCT",2,1.98,NA,NA,NA,NA,NA,NA,"stop","V32* N110R I138S F185M",4
"lib1","SARS-CoV-2","ATAAGGATGTGGCCGC",2,23.84,6.49,-4.28,0.74,1.5,1.22,0.04,">1 nonsynonymous","N4M N30R S43I I104S",4
"lib1","SARS-CoV-2","ATAAGGATTTATGAAT",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L G51R Y93W S147Y",4
"lib1","SARS-CoV-2","ATAAGGCAGACAAACC",2,21.53,10.66,-0.11,0.24,2.64,1,0.03,">1 nonsynonymous","K26R T100N K128L",3
"lib1","SARS-CoV-2","ATAAGGCAGCGGCGCT",6,36.89,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D90I A105E",2
"lib1","SARS-CoV-2","ATAAGGCAGCTCAAGA",1,75.78,10.71,-0.05,0.06,2.92,1.04,0,"1 nonsynonymous","D59Y",1
"lib1","SARS-CoV-2","ATAAGGCCAAACCCAA",6,86.13,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K48N G101C Y159S F167T",4
"lib1","SARS-CoV-2","ATAAGGCCCCAAAGCA",11,110.3,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","C49E R136G Y178G",3
"lib1","SARS-CoV-2","ATAAGGCCCCCCCTGG",6,123.54,10.3,-0.46,0.03,2.88,1.06,0,">1 nonsynonymous","Q144S N151T",2
"lib1","SARS-CoV-2","ATAAGGCCGGAAATTA",3,37.07,10.68,-0.09,0.08,2.88,1,0,"1 nonsynonymous","L60N",1
"lib1","SARS-CoV-2","ATAAGGCGAAAACCCG",3,47.68,10.08,-0.69,0.1,2.57,1.03,0,">1 nonsynonymous","I2W F62M D90K G152S T201Y",5
"lib1","SARS-CoV-2","ATAAGGCGAACTAAAA",4,81.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I88L P149F L162S",3
"lib1","SARS-CoV-2","ATAAGGCGCTATTGAC",2,8.54,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","W106D P149Q N157R",3
"lib1","SARS-CoV-2","ATAAGGCGGAAAGAAA",3,77.41,10.8,0.04,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGGCTCCACAGGG",7,43.75,8.9,-1.86,0.19,1.5,1.11,0.02,">1 nonsynonymous","C6A A14L N64Y",3
"lib1","SARS-CoV-2","ATAAGGCTGATCATAA",7,105.03,10.72,-0.04,0.05,2.94,1.03,0,"1 nonsynonymous","V153D",1
"lib1","SARS-CoV-2","ATAAGGCTTGTCCACG",6,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T K94E R127E T201Q",4
"lib1","SARS-CoV-2","ATAAGGGACACTGGAC",3,0.67,NA,NA,NA,NA,NA,NA,"stop","K48A I104K L131* V153N T170N",5
"lib1","SARS-CoV-2","ATAAGGGCAGTAGCCT",7,190.84,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T63G Y93R D98Y",3
"lib1","SARS-CoV-2","ATAAGGGGAGTTATAT",7,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T C49F L60M S129H S147Y",5
"lib1","SARS-CoV-2","ATAAGGGGATATGAAT",1,2.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","ATAAGGGGCCACTCGC",2,100.21,9.95,-0.81,0.11,2.16,1.09,0,">1 nonsynonymous","E10H V77M G83R N120A N130P",5
"lib1","SARS-CoV-2","ATAAGGGGCTCCAAAG",4,24.16,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","C6S W106L N157T",3
"lib1","SARS-CoV-2","ATAAGGGGTATAAGCC",1,6.57,8.39,-2.38,0.25,3,1.02,0.02,">1 nonsynonymous","N151S Y159V",2
"lib1","SARS-CoV-2","ATAAGGGTCCCCAATT",4,41.3,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A89R N107L E141V C150F",4
"lib1","SARS-CoV-2","ATAAGGGTTCACTATG",2,48.37,10.28,-0.48,0.06,2.86,1.04,0,">1 nonsynonymous","Y35A T140L T201A",3
"lib1","SARS-CoV-2","ATAAGGTAATTTTTAC",8,92.98,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A18V I28A Y119R C158L P197E",5
"lib1","SARS-CoV-2","ATAAGGTATATTACCT",2,2.44,NA,NA,NA,NA,NA,NA,"stop","I80* F134P",2
"lib1","SARS-CoV-2","ATAAGGTCCAGTGACC",1,30.93,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","P7T K26L F70P Y91E",4
"lib1","SARS-CoV-2","ATAAGGTGCCACCAAT",2,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E G116Q E141S P149N N157H",5
"lib1","SARS-CoV-2","ATAAGGTGGACATTAC",1,8.38,10.64,-0.13,0.11,2.86,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGGTTAGGCTTCA",16,152.87,10.74,-0.02,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGTAAAAACCCCT",12,170.23,10.66,-0.1,0.03,2.89,1.04,0,"1 nonsynonymous","S108T",1
"lib1","SARS-CoV-2","ATAAGTAAATAGAACG",4,25.67,10.71,-0.05,0.11,2.85,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAAGTAAATTAACTA",7,81.56,9.1,-1.67,0.08,2.75,1.16,0,">1 nonsynonymous","N157D L162M",2
"lib1","SARS-CoV-2","ATAAGTAACATATTAC",5,23.97,6,-4.76,0.92,3,1.1,0,">1 nonsynonymous","F12K V65K P96T N120D",4
"lib1","SARS-CoV-2","ATAAGTAACATTAAAA",1,302.83,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","D68Q F134A G152A",3
"lib1","SARS-CoV-2","ATAAGTAATATACGTA",1,44.54,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R73S G86C",2
"lib1","SARS-CoV-2","ATAAGTACCAAAAAGC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N1R T46V K87* N110L Y119G",5
"lib1","SARS-CoV-2","ATAAGTACCTAGTCTG",9,145.52,10.74,-0.03,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAAGTAGAAGAAAAC",3,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R N13K Y39V L60I L95P A105D T201I",7
"lib1","SARS-CoV-2","ATAAGTAGTAGTACCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q F156N",2
"lib1","SARS-CoV-2","ATAAGTAGTGTTTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43* P96S R127V R179S",4
"lib1","SARS-CoV-2","ATAAGTAGTTATACGG",2,7.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A N24K N120A V182F",4
"lib1","SARS-CoV-2","ATAAGTATAGTCCTCC",1,50.99,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E10C G51P V71K L95V Y175V",5
"lib1","SARS-CoV-2","ATAAGTATCTGCCACT",3,59.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68R R179D",2
"lib1","SARS-CoV-2","ATAAGTATGATCCAGG",2,0.33,NA,NA,NA,NA,NA,NA,"stop","P7* F17M S36L Y66S K87N",5
"lib1","SARS-CoV-2","ATAAGTATGCGCGTTT",1,0.32,NA,NA,NA,NA,NA,NA,"stop","K48H D112H S113Y G152S C158I Q176A K198*",7
"lib1","SARS-CoV-2","ATAAGTCAAATGACCA",1,6.27,10.93,0.17,0.14,2.84,1.03,0.01,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","ATAAGTCAGAATTTGT",9,41.9,8.93,-1.84,0.15,1.62,1.1,0.01,">1 nonsynonymous","C6D F185R",2
"lib1","SARS-CoV-2","ATAAGTCCAATACACT",1,6.46,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","V71A D137S",2
"lib1","SARS-CoV-2","ATAAGTCCCATCACTG",14,68.34,8.38,-2.38,0.27,1.5,1,0.04,">1 nonsynonymous","P82S D90M",2
"lib1","SARS-CoV-2","ATAAGTCCGTACATGG",3,46.58,10.82,0.05,0.09,2.78,1.03,0,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","ATAAGTCGACCATAAA",2,47.04,6.12,-4.64,0.67,1.5,1.14,0.01,">1 nonsynonymous","W23I L38M A145E",3
"lib1","SARS-CoV-2","ATAAGTCGGGATAAAA",1,10.14,10.42,-0.34,0.17,2.75,1.16,0.02,"1 nonsynonymous","A42K",1
"lib1","SARS-CoV-2","ATAAGTCGTAATAACT",4,42.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105E Q144K E154W",3
"lib1","SARS-CoV-2","ATAAGTCGTTTCAAAT",1,29.08,9.36,-1.41,0.17,1.81,1.07,0.01,">1 nonsynonymous","P7H I88T",2
"lib1","SARS-CoV-2","ATAAGTCTAGTTTTAA",6,18.87,6.16,-4.61,0.54,2.4,1.14,0.01,"1 nonsynonymous","V103E",1
"lib1","SARS-CoV-2","ATAAGTGAATAAGTTA",3,18.5,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K87Q Y93I",2
"lib1","SARS-CoV-2","ATAAGTGAATTGTCCG",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q A14P",2
"lib1","SARS-CoV-2","ATAAGTGAGCCACCTT",11,1.67,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","ATAAGTGATTCACGTG",2,107.73,10.48,-0.29,0.05,2.88,1,0,">1 nonsynonymous","G9I D97M Y175W T193Y V194G",5
"lib1","SARS-CoV-2","ATAAGTGCAAGCTCAT",7,39.59,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R73P I88A S113M Y121T",4
"lib1","SARS-CoV-2","ATAAGTGCCTTCAACT",9,62.73,8.35,-2.41,0.18,1.83,1.17,0.01,">1 nonsynonymous","Y123L F167W P191R S200G",4
"lib1","SARS-CoV-2","ATAAGTGCTGTTTAGC",2,37.85,9.86,-0.91,0.13,2.09,1.05,0.01,">1 nonsynonymous","V37C S45I",2
"lib1","SARS-CoV-2","ATAAGTGGGATAAAGC",3,26.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D34V D68V Y159V V173I",4
"lib1","SARS-CoV-2","ATAAGTGTAAGCCTGT",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S K48A",2
"lib1","SARS-CoV-2","ATAAGTTAAAAGCGAA",3,43.55,10.21,-0.55,0.05,2.94,1.04,0,">1 nonsynonymous","K87T Y178C",2
"lib1","SARS-CoV-2","ATAAGTTAACCACTTA",7,0.26,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib1","SARS-CoV-2","ATAAGTTCAGCAAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","T3R N30* P96I Y143I",4
"lib1","SARS-CoV-2","ATAAGTTCCACAAAGT",2,10.87,10.29,-0.47,0.12,2.29,1.02,0.01,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","ATAAGTTCTTTAAGTA",2,10.9,10.54,-0.23,0.05,2.91,1.06,0,">1 nonsynonymous","R16I V37G S139R",3
"lib1","SARS-CoV-2","ATAAGTTTAACGAAGT",4,87.41,6,-4.76,1.87,1.5,1.18,0.01,">1 nonsynonymous","L5R S36I V71P G155N P169L",5
"lib1","SARS-CoV-2","ATAAGTTTATACTAGT",2,16.29,6,-4.76,2,1.5,1.11,0.06,">1 nonsynonymous","P54G P82Y",2
"lib1","SARS-CoV-2","ATAAGTTTGCAGAAGT",4,67.09,10.34,-0.42,0.1,2.05,1.03,0,">1 nonsynonymous","G86S D97G Q168Y",3
"lib1","SARS-CoV-2","ATAAGTTTTAAATATT",11,273.22,10.67,-0.1,0.04,2.88,1.06,0,">1 nonsynonymous","S41Y N130S T140S",3
"lib1","SARS-CoV-2","ATAATAAAAACAATGT",5,0.17,NA,NA,NA,NA,NA,NA,"stop","V32S I88S C102F R127D G146L T201*",6
"lib1","SARS-CoV-2","ATAATAAAAGATTATC",4,13.36,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","C6K Y93E G172S",3
"lib1","SARS-CoV-2","ATAATAAACAAGGTCT",10,0.74,NA,NA,NA,NA,NA,NA,"stop","D34S A89S E141V T170*",4
"lib1","SARS-CoV-2","ATAATAAACATGTTAA",1,26.57,10.72,-0.05,0.05,2.95,1.02,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","ATAATAAACTAAAACA",14,164.87,9.05,-1.72,0.18,1.58,1.16,0.01,">1 nonsynonymous","C61F G83T Y123V",3
"lib1","SARS-CoV-2","ATAATAAAGCACCACA",12,33.09,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68W P96R Y119T E141S S184A",5
"lib1","SARS-CoV-2","ATAATAAAGCGTTACG",16,88.73,6,-4.76,1.48,1.5,1.21,0.02,">1 nonsynonymous","K56F Y121G",2
"lib1","SARS-CoV-2","ATAATAAAGGCTTCAT",1,5.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G51V Q144H",2
"lib1","SARS-CoV-2","ATAATAAAGTACATAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","F8I K26T K56G S113* K198M",5
"lib1","SARS-CoV-2","ATAATAAAGTGCGAAA",6,81.3,10.13,-0.64,0.11,2.42,1,0,">1 nonsynonymous","K56E P96M",2
"lib1","SARS-CoV-2","ATAATAAATGGCCAGT",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S147I S184P",2
"lib1","SARS-CoV-2","ATAATAAATTACATAA",8,71.48,10.76,-0.01,0.07,2.9,1.05,0,"1 nonsynonymous","P149N",1
"lib1","SARS-CoV-2","ATAATAAATTCACAAT",8,48.77,9.42,-1.35,0.33,1.5,1,0.07,">1 nonsynonymous","F17S G146H F160V",3
"lib1","SARS-CoV-2","ATAATAACAAAATTTG",5,121.64,10.66,-0.1,0.07,2.89,1.04,0,"1 nonsynonymous","K56I",1
"lib1","SARS-CoV-2","ATAATAACAGAGTGCG",2,52.48,6,-4.76,1.51,1.5,1.21,0.03,">1 nonsynonymous","Y93V S129T T140F F160K",4
"lib1","SARS-CoV-2","ATAATAACAGCTTTAA",2,26.73,10.1,-0.66,0.06,2.99,1,0,">1 nonsynonymous","D98Y K128V",2
"lib1","SARS-CoV-2","ATAATAACCCAGACCA",1,13.97,10.09,-0.67,0.05,2.95,1,0,">1 nonsynonymous","F8I A33R",2
"lib1","SARS-CoV-2","ATAATAACCTATGTAC",5,42.36,10.74,-0.02,0.09,2.86,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATAACGACGTAAA",4,77.44,9.86,-0.91,0.13,1.93,1.1,0.01,">1 nonsynonymous","E10A W106K F160P",3
"lib1","SARS-CoV-2","ATAATAACTAGTGTAT",1,15.02,9.78,-0.98,0.15,2.39,1,0.01,">1 nonsynonymous","R78P T85C A105V",3
"lib1","SARS-CoV-2","ATAATAACTGCATTTA",3,50.67,6.21,-4.56,0.51,1.5,1.12,0.01,">1 nonsynonymous","V11S Y35W Y50L T85N",4
"lib1","SARS-CoV-2","ATAATAAGAACTAGAC",4,32.96,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","E10V T15L D137K F167S",4
"lib1","SARS-CoV-2","ATAATAAGAGTTTAGA",4,2.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","ATAATAAGATAAATGG",2,0.41,NA,NA,NA,NA,NA,NA,"stop","G86F S113*",2
"lib1","SARS-CoV-2","ATAATAAGCATCAATT",2,2.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","ATAATAAGCCATTATA",9,69.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L F62C V65F C158A A192T",5
"lib1","SARS-CoV-2","ATAATAAGCGGGATAT",2,84.36,10.63,-0.13,0.06,2.9,1.05,0,"1 nonsynonymous","T46R",1
"lib1","SARS-CoV-2","ATAATAAGTACAGGAA",7,163.27,8.55,-2.22,0.11,2.46,1.07,0,">1 nonsynonymous","T3A Y143N",2
"lib1","SARS-CoV-2","ATAATAAGTACGACTA",15,225.4,10.71,-0.05,0.04,2.9,1.04,0,">1 nonsynonymous","R16L T63K",2
"lib1","SARS-CoV-2","ATAATAAGTACTCATA",6,44,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61K Y91C N107M S139F N171T",5
"lib1","SARS-CoV-2","ATAATAAGTCATAGTA",2,21.38,10.75,-0.01,0.07,2.95,1.06,0,">1 nonsynonymous","N4S Q168Y",2
"lib1","SARS-CoV-2","ATAATAATACTACAGT",10,298.89,10.77,0.01,0.07,2.91,1.05,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","ATAATAATCCACACAG",2,11.94,9.37,-1.39,0.16,1.79,1.15,0.01,">1 nonsynonymous","Y66T A89V S147C",3
"lib1","SARS-CoV-2","ATAATAATCCATTTTA",5,138.82,10.34,-0.43,0.03,2.91,1.04,0,"1 nonsynonymous","G174F",1
"lib1","SARS-CoV-2","ATAATAATCCCAGGCC",3,39.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W R25C K199L",3
"lib1","SARS-CoV-2","ATAATAATCTCATAAT",4,27.98,10.63,-0.14,0.08,2.9,1.09,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","ATAATAATGCAATCCA",10,116.77,10.46,-0.3,0.04,2.89,1.04,0,"1 nonsynonymous","F134D",1
"lib1","SARS-CoV-2","ATAATAATTGTGCCAT",8,18.44,9.61,-1.15,0.2,2.18,1.06,0.02,">1 nonsynonymous","T15V S41F R127K F167I",4
"lib1","SARS-CoV-2","ATAATACAAAGGATGG",2,16.82,10.63,-0.14,0.08,2.91,1.03,0,">1 nonsynonymous","K48I S200R",2
"lib1","SARS-CoV-2","ATAATACAACGTAAGG",7,76.19,10.71,-0.06,0.06,2.9,1.05,0,"1 nonsynonymous","Y121H",1
"lib1","SARS-CoV-2","ATAATACAAGCGAAGG",3,35.41,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N13Y N58A N107E D137N",4
"lib1","SARS-CoV-2","ATAATACACTAAAGCG",7,73.64,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86F D97R T140S",3
"lib1","SARS-CoV-2","ATAATACAGAAAAACA",1,16.04,6,-4.76,1.75,1.5,1.2,0.02,">1 nonsynonymous","I80G D98S L125P",3
"lib1","SARS-CoV-2","ATAATACATAAGCGGA",4,46.8,10.35,-0.41,0.07,2.89,1,0,">1 nonsynonymous","G9V A14S T63S S200P",4
"lib1","SARS-CoV-2","ATAATACATATGGGTT",11,4.18,NA,NA,NA,NA,NA,NA,"stop","K87* G101S V153N F167G Y178H",5
"lib1","SARS-CoV-2","ATAATACATCGCATAT",3,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R G83C L183S T193I P197R",5
"lib1","SARS-CoV-2","ATAATACATGAGCCTG",1,7.99,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V77P Q84L Y91L F99C S108R F134M I142Q",7
"lib1","SARS-CoV-2","ATAATACCACAGAGAC",1,40.25,10.83,0.06,0.08,2.93,1.01,0,">1 nonsynonymous","L5P E135G T201W",3
"lib1","SARS-CoV-2","ATAATACCGGCCGCAT",19,249.97,9.97,-0.8,0.05,2.77,1.02,0,">1 nonsynonymous","C6G T15L K128I",3
"lib1","SARS-CoV-2","ATAATACCTCATGGGG",1,16.49,8.44,-2.33,0.22,1.97,1.19,0.02,">1 nonsynonymous","K87T Y121R G152R",3
"lib1","SARS-CoV-2","ATAATACCTCCAAAGG",4,91.46,10.62,-0.15,0.05,2.88,1.06,0,">1 nonsynonymous","F134H P191T",2
"lib1","SARS-CoV-2","ATAATACCTCCCGGCT",10,55.12,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N4F V11D C49N K87I",4
"lib1","SARS-CoV-2","ATAATACGATAATCCC",3,2.27,NA,NA,NA,NA,NA,NA,"stop","Y39K K128* K199Y",3
"lib1","SARS-CoV-2","ATAATACGATCATAAC",10,71.18,10.63,-0.13,0.05,2.91,1.07,0,"1 nonsynonymous","V173G",1
"lib1","SARS-CoV-2","ATAATACGATGCCCCA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F C49K G146H",3
"lib1","SARS-CoV-2","ATAATACGCTCTTACT",4,40.16,6.56,-4.21,0.63,1.5,1.15,0.05,">1 nonsynonymous","V103Y R136S Q176S",3
"lib1","SARS-CoV-2","ATAATACGCTTTAATA",11,127.24,9.89,-0.88,0.1,2.3,1.05,0,">1 nonsynonymous","T3S F8P",2
"lib1","SARS-CoV-2","ATAATACGTATCCTTA",8,27.99,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50P V173F",2
"lib1","SARS-CoV-2","ATAATACGTTATCCAA",1,12.63,6.39,-4.37,0.56,1.5,1.04,0.01,">1 nonsynonymous","V20L I80Q T85E Y93I K114G V180M S184C",7
"lib1","SARS-CoV-2","ATAATACTAAACCCAA",2,16.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T R73F D90Y E141I",4
"lib1","SARS-CoV-2","ATAATACTACACTTAT",10,3.35,NA,NA,NA,NA,NA,NA,"stop","G101* Y119W",2
"lib1","SARS-CoV-2","ATAATACTAGAAATGG",5,30.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L I104K",2
"lib1","SARS-CoV-2","ATAATACTAGCACATA",9,69.98,9.51,-1.25,0.08,2.56,1.09,0,">1 nonsynonymous","K26Q S45N K87V R127H",4
"lib1","SARS-CoV-2","ATAATACTAGGCAGGC",3,54.61,10.73,-0.04,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATACTATCAAGGT",3,35.57,10.12,-0.64,0.04,2.88,1,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","ATAATACTATCTCAGG",5,40.19,10.87,0.11,0.07,2.89,1.08,0,">1 nonsynonymous","I28L P149S",2
"lib1","SARS-CoV-2","ATAATACTCACTAAAG",3,182.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N157L Q176R",2
"lib1","SARS-CoV-2","ATAATACTCCTTTATG",1,5.49,8.93,-1.84,0.3,1.5,1.01,0.03,">1 nonsynonymous","L122P E141T",2
"lib1","SARS-CoV-2","ATAATAGAAAAGGGTA",8,58.3,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","ATAATAGAACAGGACT",12,167.63,7.01,-3.75,0.17,1.71,1.15,0.01,">1 nonsynonymous","A33L Y39I V77L Y159N V173D",5
"lib1","SARS-CoV-2","ATAATAGAACATCAAA",1,5.39,8.88,-1.88,0.5,1.5,1,0.08,">1 nonsynonymous","C31R T100N A105T",3
"lib1","SARS-CoV-2","ATAATAGAACCGCGCC",2,65.83,9.3,-1.47,0.06,2.87,1.1,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","ATAATAGAATAACAAG",1,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S K56L I104Q R127K",4
"lib1","SARS-CoV-2","ATAATAGAGAAGCAAG",5,56.79,10.82,0.05,0.1,2.79,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATAGAGATATAGT",1,27.57,10.57,-0.19,0.06,3,1,0,">1 nonsynonymous","S43A C61W S129V V153L",4
"lib1","SARS-CoV-2","ATAATAGATTCAAAAG",2,58.27,7.93,-2.84,0.26,1.5,1.09,0.02,">1 nonsynonymous","D34N Y39E T46F A81S T140M Y159F",6
"lib1","SARS-CoV-2","ATAATAGCAAATGGAA",7,1.91,NA,NA,NA,NA,NA,NA,"stop","A81H S113A A145*",3
"lib1","SARS-CoV-2","ATAATAGCAACAACTA",4,40.4,6.07,-4.7,1.47,1.5,1.3,0.04,">1 nonsynonymous","R27P A89L N151Y",3
"lib1","SARS-CoV-2","ATAATAGCCACCATCT",9,53.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68G K94G S147V",3
"lib1","SARS-CoV-2","ATAATAGCTCACGTAT",21,359.3,10.81,0.05,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATAGGAGTGTTAT",3,54.55,10.88,0.12,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATAGGTGACTATT",2,23.28,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","C6V K48R R127E Q144P",4
"lib1","SARS-CoV-2","ATAATAGTCAAGTACG",1,57.78,8.92,-1.84,0.09,2.58,1.13,0,">1 nonsynonymous","R73T N120D I142T",3
"lib1","SARS-CoV-2","ATAATATAAAAGTAAG",1,50.03,9.73,-1.03,0.19,1.64,1.1,0.01,"1 nonsynonymous","D68T",1
"lib1","SARS-CoV-2","ATAATATAAGCTTCCT",1,39.38,10.81,0.05,0.1,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATATAAGGAAAAC",2,8.31,9.54,-1.22,0.24,2.39,1.33,0.04,">1 nonsynonymous","G9R T15K N107S L122W",4
"lib1","SARS-CoV-2","ATAATATAATAGAAAC",1,0.33,NA,NA,NA,NA,NA,NA,"stop","L5V I88* T201F",3
"lib1","SARS-CoV-2","ATAATATACGCTATGA",8,76.91,8.33,-2.43,0.14,2.03,1.12,0.01,">1 nonsynonymous","A18Q S108E",2
"lib1","SARS-CoV-2","ATAATATAGTTTTGTC",1,38.43,10.32,-0.45,0.06,2.92,1.03,0,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","ATAATATATAATGTGA",2,26.52,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I72R R136K Q176I",3
"lib1","SARS-CoV-2","ATAATATCAAACTAAA",4,85.26,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","C6R V77A",2
"lib1","SARS-CoV-2","ATAATATCCTAAGTAG",1,6.34,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14S T46N V103K",3
"lib1","SARS-CoV-2","ATAATATCGAATAGAA",6,80.29,10.56,-0.2,0.06,2.97,1,0,">1 nonsynonymous","K56L V153T",2
"lib1","SARS-CoV-2","ATAATATCGAATTTAT",4,92.58,9.79,-0.97,0.18,1.64,1.12,0.01,">1 nonsynonymous","P96E G116K",2
"lib1","SARS-CoV-2","ATAATATGAACACGTC",3,8.64,8.68,-2.09,0.18,2.97,1.03,0.01,"1 nonsynonymous","S113Y",1
"lib1","SARS-CoV-2","ATAATATGTAAACGAC",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N V115H",2
"lib1","SARS-CoV-2","ATAATATTACGGCGCC",5,5.85,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D59T G83D V182D",3
"lib1","SARS-CoV-2","ATAATATTATAATACA",10,62.56,6.21,-4.56,0.64,1.5,1.21,0.01,">1 nonsynonymous","T3R S36Y S113F",3
"lib1","SARS-CoV-2","ATAATATTATACAATT",1,578.72,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17T V77Q A89S G101C",4
"lib1","SARS-CoV-2","ATAATATTTACAAATA",1,5.5,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A14R F44D D112G",3
"lib1","SARS-CoV-2","ATAATCAAAAGAAAAT",6,26.03,10.03,-0.73,0.21,2.19,1,0.01,"1 nonsynonymous","K48G",1
"lib1","SARS-CoV-2","ATAATCAAGCAAATGA",4,26.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C61L L95A V103W Y121N G155E",5
"lib1","SARS-CoV-2","ATAATCAATTATCACA",3,50.1,8.87,-1.89,0.15,1.5,1.17,0.01,">1 nonsynonymous","V11R T140V",2
"lib1","SARS-CoV-2","ATAATCAATTCTTGTT",4,28.75,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y50Q L95I G101V A145L P149L",5
"lib1","SARS-CoV-2","ATAATCACAAAAAACT",1,16.35,8.96,-1.81,0.26,1.86,1.07,0.04,">1 nonsynonymous","A89R E141A",2
"lib1","SARS-CoV-2","ATAATCACATGTACGT",2,43.74,10.03,-0.74,0.12,2.06,1.05,0,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","ATAATCACATTACTCT",7,57.45,9.87,-0.9,0.11,2.57,1.02,0,">1 nonsynonymous","T15D S69A",2
"lib1","SARS-CoV-2","ATAATCACCAAGTATC",4,0.04,NA,NA,NA,NA,NA,NA,"stop","V37D Q84T D112S L122* Q163E",5
"lib1","SARS-CoV-2","ATAATCACCTACTGAG",1,35.13,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G172Q",1
"lib1","SARS-CoV-2","ATAATCACGTAGTTAA",4,84.4,10.49,-0.28,0.05,2.85,1.07,0,"1 nonsynonymous","A145M",1
"lib1","SARS-CoV-2","ATAATCAGAACTACCC",5,27.88,6.89,-3.88,0.25,1.5,1.1,0.01,">1 nonsynonymous","P149M N157V",2
"lib1","SARS-CoV-2","ATAATCAGACAGGTCT",2,9.36,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y93I N120M I142S G155F",4
"lib1","SARS-CoV-2","ATAATCAGACGAACTT",4,120.02,8.71,-2.05,0.19,1.5,1.15,0.01,">1 nonsynonymous","Y39G L162Q",2
"lib1","SARS-CoV-2","ATAATCAGAGCCCGAA",10,48.61,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I88T P133N F156W",3
"lib1","SARS-CoV-2","ATAATCAGGAATACAA",2,49.12,7.62,-3.14,0.27,1.5,1.08,0.02,">1 nonsynonymous","L60R E141R Q176R",3
"lib1","SARS-CoV-2","ATAATCATAGCCCAAG",4,62.11,10.32,-0.45,0.09,2.5,1,0,">1 nonsynonymous","I2P A18T S41I S164T K198L",5
"lib1","SARS-CoV-2","ATAATCATAGTGAACG",7,137.66,10.55,-0.22,0.04,2.9,1.05,0,">1 nonsynonymous","D98K Y121Q P197N",3
"lib1","SARS-CoV-2","ATAATCATGTGTATAT",16,287.82,10.73,-0.04,0.07,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATCATGTTTTAAA",1,8.68,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","K56G P82W",2
"lib1","SARS-CoV-2","ATAATCATTGTGGGGT",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39K P82T I138T T148G C158Y H189R G196W",7
"lib1","SARS-CoV-2","ATAATCCACACAACCT",3,6.42,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ATAATCCACGGACTCT",2,23.23,10.47,-0.29,0.08,2.94,1.05,0,">1 nonsynonymous","N58K I138L",2
"lib1","SARS-CoV-2","ATAATCCAGAAGGCTT",3,145.42,10.24,-0.52,0.04,2.9,1.01,0,">1 nonsynonymous","E10G T63N P149T",3
"lib1","SARS-CoV-2","ATAATCCATCATAGCC",6,166.99,10.03,-0.74,0.05,2.83,1.01,0,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","ATAATCCCCTAGGCGA",5,58.61,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S36A G101M",2
"lib1","SARS-CoV-2","ATAATCCCTTGAATGT",1,12.28,10.86,0.1,0.08,2.86,1.07,0,"1 nonsynonymous","S29F",1
"lib1","SARS-CoV-2","ATAATCCGAAAAAGTC",1,16.92,6.08,-4.69,1.15,1.5,1.14,0.04,">1 nonsynonymous","P82L S139I N171L K198T",4
"lib1","SARS-CoV-2","ATAATCCGCCTATTAC",4,1.89,NA,NA,NA,NA,NA,NA,"stop","F47* S139N E186G",3
"lib1","SARS-CoV-2","ATAATCCGGACTTTAG",2,240.18,8.68,-2.08,0.08,2.85,1.06,0,">1 nonsynonymous","N64F K87V G117V S139D",4
"lib1","SARS-CoV-2","ATAATCCGTTCTACGA",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L K56M G86D Y119K",4
"lib1","SARS-CoV-2","ATAATCCTAAATGAGG",1,39.1,10.87,0.11,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATCCTGCTACTTA",3,39.14,10.72,-0.05,0.09,2.86,1.1,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","ATAATCCTGTACGGTT",2,1.32,NA,NA,NA,NA,NA,NA,"stop","G51L L57V V115A N130* G174L",5
"lib1","SARS-CoV-2","ATAATCGAAAAAGAGG",6,97.36,10.66,-0.11,0.05,2.83,1.1,0,">1 nonsynonymous","A33G N64S T201S",3
"lib1","SARS-CoV-2","ATAATCGAATCACTGA",6,22.33,6.94,-3.82,0.38,1.5,1.21,0.03,">1 nonsynonymous","T15M S45M A81R",3
"lib1","SARS-CoV-2","ATAATCGACTACAGAG",2,20.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L L122K",2
"lib1","SARS-CoV-2","ATAATCGATAAAGTCC",4,163.85,10.71,-0.06,0.05,2.88,1.05,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","ATAATCGATAGCATGG",2,87.1,9.06,-1.7,0.09,2.68,1.08,0,">1 nonsynonymous","Y119I G152H",2
"lib1","SARS-CoV-2","ATAATCGATAGTAAGC",3,14.29,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","P96D F167L",2
"lib1","SARS-CoV-2","ATAATCGCAAAGACCG",1,74.62,10.27,-0.5,0.04,2.85,1.07,0,">1 nonsynonymous","G116D K128F T201L",3
"lib1","SARS-CoV-2","ATAATCGCAAAGCTAC",5,56.23,10.22,-0.54,0.08,2.9,1,0,"1 nonsynonymous","A33K",1
"lib1","SARS-CoV-2","ATAATCGCCCTTCGCT",1,63.2,6,-4.76,2,3,1.13,0,">1 nonsynonymous","L38I W106R K128R Q176M",4
"lib1","SARS-CoV-2","ATAATCGCGACCACTA",4,0.54,NA,NA,NA,NA,NA,NA,"stop","G83Y P96* I104S N151F T201R",5
"lib1","SARS-CoV-2","ATAATCGCGATTCAAA",2,15.78,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","E10A N92V D97A Y175S",4
"lib1","SARS-CoV-2","ATAATCGCGGATAATA",7,143.1,10.77,0,0.05,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAATCGTACTCAGAT",4,45.86,10.58,-0.18,0.05,2.97,1,0,">1 nonsynonymous","G83N G174A",2
"lib1","SARS-CoV-2","ATAATCGTCCAGCTTT",6,1.11,NA,NA,NA,NA,NA,NA,"stop","Y121* Y175*",2
"lib1","SARS-CoV-2","ATAATCGTTCTAAATT",4,1.89,NA,NA,NA,NA,NA,NA,"stop","N64V V103L K132R C158* Q163H N171M",6
"lib1","SARS-CoV-2","ATAATCGTTTATCACC",4,12.44,6.96,-3.8,0.36,2.59,1.12,0.02,">1 nonsynonymous","F8P C158L",2
"lib1","SARS-CoV-2","ATAATCGTTTGAATCA",2,66.25,10.74,-0.03,0.09,2.91,1.05,0,">1 nonsynonymous","S41T A192F",2
"lib1","SARS-CoV-2","ATAATCTAAACTGATG",5,2.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","ATAATCTAGAAAAACA",3,5.01,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41R G74V N120I",3
"lib1","SARS-CoV-2","ATAATCTAGTACGGCT",4,73.59,10.78,0.01,0.05,2.87,1.08,0,">1 nonsynonymous","K128L F160A P197V",3
"lib1","SARS-CoV-2","ATAATCTATGCTTGGA",2,2.86,NA,NA,NA,NA,NA,NA,"stop","S36P A89N P197T S200* T201M",5
"lib1","SARS-CoV-2","ATAATCTCACATAGAC",1,14.43,6.02,-4.75,0.29,1.5,1.04,0,">1 nonsynonymous","F70V N151I N157M",3
"lib1","SARS-CoV-2","ATAATCTCCGTTGGCA",2,10.18,7.65,-3.12,0.29,1.5,1,0.03,">1 nonsynonymous","W23K Y91L K128P",3
"lib1","SARS-CoV-2","ATAATCTGATCAGTGT",2,22.14,10.64,-0.12,0.07,2.97,1.01,0,">1 nonsynonymous","P7S T63N",2
"lib1","SARS-CoV-2","ATAATCTGGAAACTCT",2,26.94,NA,NA,NA,NA,NA,NA,"stop","F8* V180M",2
"lib1","SARS-CoV-2","ATAATCTGGACCCAAA",1,65.05,10.72,-0.05,0.06,2.92,1.05,0,"1 nonsynonymous","V32H",1
"lib1","SARS-CoV-2","ATAATCTTAAATATGG",3,49.47,6.05,-4.72,0.88,1.5,1.16,0.02,">1 nonsynonymous","V37S C158L",2
"lib1","SARS-CoV-2","ATAATCTTGTAACAAC",3,26.96,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V71T C158R V173G",3
"lib1","SARS-CoV-2","ATAATCTTTACATCCA",6,4.48,NA,NA,NA,NA,NA,NA,"stop","N1M C61A Y121* G155H R179L",5
"lib1","SARS-CoV-2","ATAATCTTTGATAAAG",2,19.89,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F44S D97L L122P P197S",4
"lib1","SARS-CoV-2","ATAATCTTTTTTCCAA",12,137.63,10.24,-0.52,0.04,2.89,1.02,0,">1 nonsynonymous","R78S D98T Q144V",3
"lib1","SARS-CoV-2","ATAATGAAAACTTTGT",12,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W P133Q T148I",3
"lib1","SARS-CoV-2","ATAATGAAAGCTACTT",5,1.75,NA,NA,NA,NA,NA,NA,"stop","N24Q Y39* K94Q V181T",4
"lib1","SARS-CoV-2","ATAATGAAGGGAGACA",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V N13D C102Q",3
"lib1","SARS-CoV-2","ATAATGAATCCAGAAC",5,45.92,6,-4.76,1.72,1.5,1.21,0.02,">1 nonsynonymous","C49F D90R T170F T201E",4
"lib1","SARS-CoV-2","ATAATGAATGATATTA",5,16.16,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","A42G G83N Y119R S129H Y165K",5
"lib1","SARS-CoV-2","ATAATGACAAATCCTG",2,18.17,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","S19W T55M D90N Q144R N151Q C158T R179Y L183I",8
"lib1","SARS-CoV-2","ATAATGACAACAGACC",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I L95T",2
"lib1","SARS-CoV-2","ATAATGACCACGGTAA",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C C61T G101T",3
"lib1","SARS-CoV-2","ATAATGACCCATAGCA",2,13.84,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","Y50P C61F V65I A81W E135P",5
"lib1","SARS-CoV-2","ATAATGACCGAAATAA",2,11.37,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","G9A S45R K56V R127E",4
"lib1","SARS-CoV-2","ATAATGACCTTCACAC",3,37.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R F44C A81I P149Y",4
"lib1","SARS-CoV-2","ATAATGACGGTTGGAC",3,169.57,10.59,-0.17,0.05,2.9,1.06,0,"1 nonsynonymous","S129M",1
"lib1","SARS-CoV-2","ATAATGACGTGCATAT",2,40.36,10.26,-0.5,0.07,2.88,1,0,">1 nonsynonymous","N1H A33N",2
"lib1","SARS-CoV-2","ATAATGACTTTACCAA",3,17.99,9.85,-0.91,0.29,1.5,1,0.05,">1 nonsynonymous","G86H D97T",2
"lib1","SARS-CoV-2","ATAATGAGCCGCGCTG",3,82.14,10.68,-0.09,0.04,2.96,1.01,0,"1 nonsynonymous","V194I",1
"lib1","SARS-CoV-2","ATAATGAGCTCCCGTT",2,20.66,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6P Y123V Y178R",3
"lib1","SARS-CoV-2","ATAATGATAAAGATCC",1,57.04,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","S45M Y66N S108V S139M N157L Q176K",6
"lib1","SARS-CoV-2","ATAATGATAAGCAATA",1,4.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","ATAATGATAGTTGAAA",2,28.81,6,-4.76,2,3,1.23,0,">1 nonsynonymous","L95P A105W G146R",3
"lib1","SARS-CoV-2","ATAATGATATCACGTA",1,3.56,NA,NA,NA,NA,NA,NA,"stop","L5S C31M K56R A89L N110A L122R Y143* V173S",8
"lib1","SARS-CoV-2","ATAATGATCAAAGTCC",18,180.03,10.4,-0.37,0.06,2.89,1,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","ATAATGATCAACTAAA",2,60.95,9.09,-1.67,0.08,2.92,1.06,0,">1 nonsynonymous","G117K Q168H",2
"lib1","SARS-CoV-2","ATAATGATCCGAGTGT",6,407.52,7.47,-3.3,0.2,1.5,1.09,0.01,">1 nonsynonymous","F44D N58S E135K G155D",4
"lib1","SARS-CoV-2","ATAATGCAACACCAAT",12,0.45,NA,NA,NA,NA,NA,NA,"stop","L57* D97F Y119P",3
"lib1","SARS-CoV-2","ATAATGCACATATGCA",2,26.27,9.92,-0.85,0.24,2.36,1.17,0.03,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","ATAATGCACCGAACAT",2,0.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","ATAATGCACGCAGTCT",6,36.81,6.15,-4.62,0.63,1.5,1.15,0.01,">1 nonsynonymous","G9E T100I I104V R179L",4
"lib1","SARS-CoV-2","ATAATGCAGTTTGGCA",15,199.06,10.26,-0.51,0.04,2.88,1,0,">1 nonsynonymous","D98Y P149Y",2
"lib1","SARS-CoV-2","ATAATGCATGCCCTCA",4,119.87,10.76,0,0.06,2.94,1.02,0,">1 nonsynonymous","S36N V153E",2
"lib1","SARS-CoV-2","ATAATGCATGCTCATA",12,177.04,10.72,-0.04,0.07,2.77,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATGCCACTATTAA",4,5.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H A33M R136E",3
"lib1","SARS-CoV-2","ATAATGCCGCGAAGGC",1,21.23,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","N109D G116A R136P",3
"lib1","SARS-CoV-2","ATAATGCCGTGATCCC",3,80.8,10.65,-0.12,0.06,2.91,1.02,0,">1 nonsynonymous","S41W S129R S147I",3
"lib1","SARS-CoV-2","ATAATGCGTAAAATTC",6,137.89,10.71,-0.05,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATGCTATGTCACC",5,89.19,9.03,-1.74,0.15,1.62,1.15,0.01,">1 nonsynonymous","L38S Y123L T140R",3
"lib1","SARS-CoV-2","ATAATGGAAAAATAAA",2,40.46,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T100E R124C",2
"lib1","SARS-CoV-2","ATAATGGAATGCAGCT",4,164.57,10.75,-0.01,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATGGACAAATAAT",2,43.25,8.55,-2.21,0.11,2.9,1.1,0.01,">1 nonsynonymous","Y39S V115S S164D",3
"lib1","SARS-CoV-2","ATAATGGACAACACTG",3,14.96,10.77,0,0.08,2.79,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATGGACAATGTTT",15,64.61,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F47L A81L K87A C150Y",4
"lib1","SARS-CoV-2","ATAATGGACATCAAAC",7,69.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64V G86Y R136A T201C",4
"lib1","SARS-CoV-2","ATAATGGACGGATCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","F62L I72Q D112I L122* P161T",5
"lib1","SARS-CoV-2","ATAATGGAGGTACGTC",1,68.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P S43F R78C Y93F S139K",5
"lib1","SARS-CoV-2","ATAATGGATCACACTA",5,175.06,9.34,-1.42,0.09,1.88,1.14,0,">1 nonsynonymous","P7Q F17Y F156A V173R Y178Q",5
"lib1","SARS-CoV-2","ATAATGGCAACGGCAA",4,75.94,8.15,-2.61,0.24,1.5,1.22,0.02,">1 nonsynonymous","I28K Y119S G166S",3
"lib1","SARS-CoV-2","ATAATGGCAGCCTAAG",4,124.45,10.17,-0.59,0.14,2.36,1.07,0.01,">1 nonsynonymous","N24H D59A G116T",3
"lib1","SARS-CoV-2","ATAATGGCAGCTAACT",3,27.47,10.28,-0.49,0.06,2.85,1.02,0,">1 nonsynonymous","R136S L188Q T201L",3
"lib1","SARS-CoV-2","ATAATGGCGCAAGATA",4,21.42,7.86,-2.91,0.34,1.5,1.14,0.03,"1 nonsynonymous","E76I",1
"lib1","SARS-CoV-2","ATAATGGCTAAAACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106V I138R",2
"lib1","SARS-CoV-2","ATAATGGGAAAATTAT",9,2.17,NA,NA,NA,NA,NA,NA,"stop","K26T F156*",2
"lib1","SARS-CoV-2","ATAATGGGCGTTGACA",1,26.42,10.57,-0.19,0.12,2.81,1.08,0.01,"1 nonsynonymous","P133G",1
"lib1","SARS-CoV-2","ATAATGTAAAAATTTT",1,37.56,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9I F167A",2
"lib1","SARS-CoV-2","ATAATGTAATGACTTT",2,24.58,10.83,0.06,0.08,2.93,1.05,0,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","ATAATGTAATGCTGTC",9,88.63,8.22,-2.55,0.16,1.81,1.11,0.01,">1 nonsynonymous","F47T N118P",2
"lib1","SARS-CoV-2","ATAATGTACTCGTGTC",3,38.62,6.17,-4.59,0.96,1.5,1.16,0.05,">1 nonsynonymous","V11C S45I A89K Y119H",4
"lib1","SARS-CoV-2","ATAATGTATTATAAAA",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P D97W N107D",3
"lib1","SARS-CoV-2","ATAATGTCAGGCATTC",10,156.36,9.56,-1.2,0.11,1.81,1.1,0,">1 nonsynonymous","G51S C61Y I138H",3
"lib1","SARS-CoV-2","ATAATGTCATCGCGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","T15* S41H F99S D137L",4
"lib1","SARS-CoV-2","ATAATGTCGATGTGAT",2,3.86,NA,NA,NA,NA,NA,NA,"stop","P7I V71K D112* Y123V",4
"lib1","SARS-CoV-2","ATAATGTCTACATAAA",7,1.02,NA,NA,NA,NA,NA,NA,"stop","N64S Y66* T100L D112A K128V",5
"lib1","SARS-CoV-2","ATAATGTCTGGATTAC",2,87.65,9.28,-1.48,0.07,2.85,1.09,0,"1 nonsynonymous","G166W",1
"lib1","SARS-CoV-2","ATAATGTGAAACATGG",4,111.32,9.95,-0.81,0.06,2.73,1.04,0,">1 nonsynonymous","N13T Q84A T100I I142Q F160Y",5
"lib1","SARS-CoV-2","ATAATGTGAATCACTG",8,0.98,NA,NA,NA,NA,NA,NA,"stop","I80* K87V P96Y P177S",4
"lib1","SARS-CoV-2","ATAATGTGCTAAACAT",2,9.5,11,0.23,0.1,2.84,1.02,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","ATAATGTGCTGAAATT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","F12T N171F Y175*",3
"lib1","SARS-CoV-2","ATAATGTGGCGCACAT",3,11.47,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","A18L K56L S69V H189C",4
"lib1","SARS-CoV-2","ATAATGTGGTCATACA",3,83.07,10.7,-0.06,0.06,2.91,1.03,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATAATGTTAAAGCTTT",4,128.79,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C61P G172N",2
"lib1","SARS-CoV-2","ATAATGTTAAGCTTTC",2,11.39,9.79,-0.97,0.08,2.65,1,0,">1 nonsynonymous","S45F G146A",2
"lib1","SARS-CoV-2","ATAATGTTTTAAGCAC",13,158.81,8.34,-2.42,0.18,1.9,1.13,0.01,">1 nonsynonymous","A42T Y165C",2
"lib1","SARS-CoV-2","ATAATGTTTTCGTTGT",4,234.74,10.5,-0.26,0.04,2.91,1,0,">1 nonsynonymous","R27Q N58G F185Y",3
"lib1","SARS-CoV-2","ATAATTAAAAAGGTTA",3,57.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K48S P82D K87M I142Y T170A",5
"lib1","SARS-CoV-2","ATAATTAAACAATAGA",2,9.89,NA,NA,NA,NA,NA,NA,"stop","V20Y G51*",2
"lib1","SARS-CoV-2","ATAATTAAACGACTAT",6,51.35,10.69,-0.07,0.07,2.91,1.03,0,"1 nonsynonymous","S36V",1
"lib1","SARS-CoV-2","ATAATTAAACGTCGAA",1,2.01,NA,NA,NA,NA,NA,NA,"stop","K56* C61V A105G",3
"lib1","SARS-CoV-2","ATAATTAACAATTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43K G166* S184V",3
"lib1","SARS-CoV-2","ATAATTAACAGCCGAA",10,33.36,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I2T N13I N107E I142F",4
"lib1","SARS-CoV-2","ATAATTAACCTATAGT",8,92.83,8.93,-1.84,0.25,1.5,1.26,0.03,">1 nonsynonymous","G51I E186H",2
"lib1","SARS-CoV-2","ATAATTAAGAACGATC",3,12.96,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N4M D34R I88T G155T G172C",5
"lib1","SARS-CoV-2","ATAATTAATAAATTCC",5,104.52,10.72,-0.04,0.1,2.85,1.1,0,">1 nonsynonymous","T3N T201Q",2
"lib1","SARS-CoV-2","ATAATTAATATGCTGA",3,30.57,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","P7G N64F I104T D112H",4
"lib1","SARS-CoV-2","ATAATTAATGACTTAT",8,53.78,6.71,-4.06,0.29,1.5,1.11,0.01,">1 nonsynonymous","D90Y F99Y G166T",3
"lib1","SARS-CoV-2","ATAATTAATTACAAAG",3,37.2,10.75,-0.01,0.1,2.9,1.07,0,">1 nonsynonymous","G9S T15S",2
"lib1","SARS-CoV-2","ATAATTACAACCGCTA",1,12.91,9.89,-0.87,0.18,2.33,1.01,0.01,">1 nonsynonymous","N120M R127S",2
"lib1","SARS-CoV-2","ATAATTACAATCATAA",2,27.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y91D F99H V103S Y165H",4
"lib1","SARS-CoV-2","ATAATTACCATATGTG",2,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L I104D L122K",3
"lib1","SARS-CoV-2","ATAATTACGCGCAGAA",7,1827.43,10.25,-0.51,0.03,2.85,1,0,">1 nonsynonymous","N4K Y35L L60R P133N G196R",5
"lib1","SARS-CoV-2","ATAATTACGGTACAAT",1,24.88,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y121N S129C G146E",3
"lib1","SARS-CoV-2","ATAATTACTAAGATGA",5,90.17,10.75,-0.02,0.06,2.95,1.03,0,">1 nonsynonymous","T100V P149T",2
"lib1","SARS-CoV-2","ATAATTAGACCCCTTA",1,3.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102R",1
"lib1","SARS-CoV-2","ATAATTAGCAAGACAA",2,20.98,10.77,0,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATTAGCCCTGCAA",7,260.05,9.94,-0.83,0.08,2.68,1.01,0,">1 nonsynonymous","C6P T201M",2
"lib1","SARS-CoV-2","ATAATTAGCGGTTTGT",2,75.07,10.27,-0.49,0.05,2.9,1.06,0,">1 nonsynonymous","R73T P197V",2
"lib1","SARS-CoV-2","ATAATTAGTGTGACCA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","N1* S69R N130Q",3
"lib1","SARS-CoV-2","ATAATTATAAAGATCG",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q F99I N120R",3
"lib1","SARS-CoV-2","ATAATTATACCTGCTG",3,45.05,10.27,-0.5,0.14,2.45,1.02,0.01,">1 nonsynonymous","S36D W106K",2
"lib1","SARS-CoV-2","ATAATTATACTCACTA",4,12.65,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F12A Y119H N120Y R179M",4
"lib1","SARS-CoV-2","ATAATTATATAATCGG",2,22.73,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9T K56W R124H A190S",4
"lib1","SARS-CoV-2","ATAATTATCTGACATC",2,15.74,6.22,-4.54,0.81,1.5,1.14,0.03,">1 nonsynonymous","L60T G83C L95A T100E C158L",5
"lib1","SARS-CoV-2","ATAATTATGATAACGA",7,0.83,NA,NA,NA,NA,NA,NA,"stop","E10D T63S G174*",3
"lib1","SARS-CoV-2","ATAATTATTCCCCTGA",1,8.24,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","V37F S45C D75V V103M",4
"lib1","SARS-CoV-2","ATAATTATTTTCAAAA",5,38.89,7.61,-3.15,0.34,1.5,1.29,0.04,">1 nonsynonymous","G9F V181Q",2
"lib1","SARS-CoV-2","ATAATTCAAACGAAAA",1,10.03,6,-4.76,2,3,1.06,0,">1 nonsynonymous","T85D D90V S129A T140N C158D P169Y",6
"lib1","SARS-CoV-2","ATAATTCAAAGATAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","R25* D68S",2
"lib1","SARS-CoV-2","ATAATTCAAGCACATG",13,89.19,10.65,-0.12,0.04,2.87,1.06,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","ATAATTCAAGGGCCTC",2,65.6,10.68,-0.09,0.08,2.85,1.08,0,"1 nonsynonymous","K26L",1
"lib1","SARS-CoV-2","ATAATTCAATATTGCC",7,2.38,NA,NA,NA,NA,NA,NA,"stop","C6G A22* C195F",3
"lib1","SARS-CoV-2","ATAATTCACATTTGCC",2,0.38,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","ATAATTCAGAGACGAA",7,20.13,9.01,-1.76,0.31,1.61,1.21,0.04,">1 nonsynonymous","S41M I104L L131A",3
"lib1","SARS-CoV-2","ATAATTCATGTGAGAA",7,76.48,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S41R A105M V115Y Y121F G155S",5
"lib1","SARS-CoV-2","ATAATTCCAAATTAGA",4,104.69,10.73,-0.03,0.06,2.88,1.11,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","ATAATTCGAAATGGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6W S19L N40G K48T S53Y F99* F167W",7
"lib1","SARS-CoV-2","ATAATTCGAACAAGGT",4,21.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F47R L95S T201P",3
"lib1","SARS-CoV-2","ATAATTCGCACTATCC",1,13.73,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","Y35R G86E L183P",3
"lib1","SARS-CoV-2","ATAATTCTAATAGTGT",2,18.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1R S43M V77Y T148N Q163L V173A",6
"lib1","SARS-CoV-2","ATAATTCTACGTGCAA",5,53,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A105R R136S T201E",3
"lib1","SARS-CoV-2","ATAATTCTCACCGCAT",1,24.97,10.72,-0.05,0.1,2.87,1.07,0.01,"1 nonsynonymous","S43E",1
"lib1","SARS-CoV-2","ATAATTCTTCCATCAA",1,31.28,9.64,-1.13,0.13,2.66,1.08,0.01,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","ATAATTGAAGTTGCCT",3,0.95,NA,NA,NA,NA,NA,NA,"stop","S29* S45A N64A Y91N Y175D P197V",6
"lib1","SARS-CoV-2","ATAATTGAGTTTAAGC",1,11.59,10.13,-0.64,0.11,2.8,1.03,0.01,">1 nonsynonymous","C6D D34V D59A",3
"lib1","SARS-CoV-2","ATAATTGCCCCCGAAA",10,1.54,NA,NA,NA,NA,NA,NA,"stop","K56G T85W Y119K F156W Q168L K198*",6
"lib1","SARS-CoV-2","ATAATTGCTTTGGTTA",1,32.69,8.56,-2.2,0.17,1.94,1.13,0.01,">1 nonsynonymous","K56S Q84C I104S L125T",4
"lib1","SARS-CoV-2","ATAATTGGCCGTAGTG",3,76.25,10.09,-0.68,0.07,2.61,1.01,0,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","ATAATTGGCTAAAGCT",7,137.26,10.69,-0.08,0.06,2.91,1.05,0,">1 nonsynonymous","E10D Y123H",2
"lib1","SARS-CoV-2","ATAATTGTACAGTTCA",16,243.28,9.88,-0.89,0.07,2.57,1.04,0,">1 nonsynonymous","A18T C61I D90L L122H",4
"lib1","SARS-CoV-2","ATAATTGTCTCCATCA",2,18.13,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y93L G117R K132A",3
"lib1","SARS-CoV-2","ATAATTTAAAGGAGCT",1,9.81,10.75,-0.01,0.08,2.89,1,0,">1 nonsynonymous","N1Y C61K",2
"lib1","SARS-CoV-2","ATAATTTAACCGCGCA",4,23.74,7.27,-3.5,0.18,1.5,1.07,0.01,">1 nonsynonymous","N13Y A42T N107I L122S",4
"lib1","SARS-CoV-2","ATAATTTACAAGCATA",3,75.13,10.74,-0.03,0.06,2.94,1.03,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","ATAATTTAGCGGTAAT",9,99.88,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S45K D59S G74M R127F Q176H T201E",6
"lib1","SARS-CoV-2","ATAATTTAGGCGCCGG",4,64.7,8.57,-2.2,0.11,2.28,1.14,0.01,">1 nonsynonymous","K26E L60A G166W",3
"lib1","SARS-CoV-2","ATAATTTATGAGTGAA",8,75.32,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38A C61N Q168P",3
"lib1","SARS-CoV-2","ATAATTTCAATGGATA",6,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21A N64T Q84S P96F L122G K128M T148H Q168T",8
"lib1","SARS-CoV-2","ATAATTTCACGATTAC",6,14.37,10.21,-0.55,0.11,2.8,1,0.01,">1 nonsynonymous","A22V S41H F160R",3
"lib1","SARS-CoV-2","ATAATTTCACTAAAGT",1,4.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","ATAATTTCAGCCTCCA",1,17.41,8.96,-1.81,0.39,1.5,1.01,0.07,">1 nonsynonymous","S36M G86E",2
"lib1","SARS-CoV-2","ATAATTTCATGAAACC",2,13.06,10.79,0.03,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATTTCCCTAGACA",2,23.01,10.58,-0.19,0.1,2.92,1.04,0.01,">1 nonsynonymous","T55N F62N",2
"lib1","SARS-CoV-2","ATAATTTCTACATTAG",5,49.65,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I72S G86T Y93F N118D",4
"lib1","SARS-CoV-2","ATAATTTCTTAACCGA",6,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A145F Q163P",2
"lib1","SARS-CoV-2","ATAATTTGAATGTGGT",2,33.28,9.93,-0.84,0.07,2.69,1.07,0,">1 nonsynonymous","D90F N120F",2
"lib1","SARS-CoV-2","ATAATTTGGCATCGAG",2,1.94,NA,NA,NA,NA,NA,NA,"stop","I2T R16* D90G",3
"lib1","SARS-CoV-2","ATAATTTTAACGGACT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","C6A G83C Y93P G101E D112* G117V T201Y",7
"lib1","SARS-CoV-2","ATAATTTTAGATAAGT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","P54T E135I S200*",3
"lib1","SARS-CoV-2","ATAATTTTAGCGCAAC",8,68.82,10.81,0.04,0.07,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAATTTTATGTACGG",2,47.54,10.81,0.05,0.07,2.86,1.04,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","ATAATTTTCGTATCCA",4,56.11,9.71,-1.05,0.02,2.88,1.06,0,">1 nonsynonymous","N171L A190T",2
"lib1","SARS-CoV-2","ATAATTTTGTACAAAA",3,13.98,10.62,-0.15,0.2,2.89,1.04,0.05,">1 nonsynonymous","T63Y K87Y",2
"lib1","SARS-CoV-2","ATACAAAAAAAGCGCA",2,78.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R16L Y39C N110H T140E C158R",5
"lib1","SARS-CoV-2","ATACAAAAAAGACAAT",1,5.19,10.6,-0.16,0.27,2.84,1,0.02,"1 nonsynonymous","S53G",1
"lib1","SARS-CoV-2","ATACAAAAAGGCGGAA",7,155.43,9.86,-0.9,0.1,2.18,1.04,0,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","ATACAAAACAGCTTTA",3,57.3,10.66,-0.11,0.05,2.94,1.04,0,">1 nonsynonymous","E141R T201E",2
"lib1","SARS-CoV-2","ATACAAAACCGCATAA",3,9.77,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D68P C102K",2
"lib1","SARS-CoV-2","ATACAAAACGAGCGGC",5,35.93,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I2V G86F E141S",3
"lib1","SARS-CoV-2","ATACAAAAGAAAAAGT",3,14.51,6.46,-4.31,0.63,1.5,1.11,0.03,">1 nonsynonymous","N92S F99R",2
"lib1","SARS-CoV-2","ATACAAAAGATAATCT",1,46.84,8.4,-2.37,0.17,2.05,1.1,0.01,">1 nonsynonymous","G51I Y119D K198G",3
"lib1","SARS-CoV-2","ATACAAAAGATCTCTC",3,22.21,10.94,0.17,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACAAAAGCATAAAA",15,153.32,9.71,-1.05,0.11,1.77,1.1,0,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","ATACAAAATATTGGCT",5,10.04,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","L95N F160H",2
"lib1","SARS-CoV-2","ATACAAAATCATCATT",9,22.82,7.09,-3.67,0.38,1.5,1.07,0.06,">1 nonsynonymous","S41L L57N N107T",3
"lib1","SARS-CoV-2","ATACAAAATCTCCATT",2,31.21,10.68,-0.08,0.07,2.99,1,0,">1 nonsynonymous","C61G K114Q",2
"lib1","SARS-CoV-2","ATACAAAATTAAAAAT",2,14.2,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12L T46A L57C G146E N157M",5
"lib1","SARS-CoV-2","ATACAAAATTTGTTCA",6,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32T Y39L K87M G172C",4
"lib1","SARS-CoV-2","ATACAAACAAATGTTA",2,56.97,10.79,0.02,0.1,2.87,1.08,0,">1 nonsynonymous","L5Q S36N",2
"lib1","SARS-CoV-2","ATACAAACAAGGCAAA",5,10.83,7.11,-3.66,0.45,1.5,1.08,0.04,">1 nonsynonymous","G9K G51S I80L L122I",4
"lib1","SARS-CoV-2","ATACAAACAATTTACA",2,41.97,10.07,-0.69,0.05,2.79,1.04,0,">1 nonsynonymous","D90V T100I",2
"lib1","SARS-CoV-2","ATACAAACATCCATTT",2,16.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35F A89Y N107E",3
"lib1","SARS-CoV-2","ATACAAACATGCCCAA",10,95.56,6.28,-4.48,0.46,1.5,1.16,0.01,">1 nonsynonymous","G86W D97F",2
"lib1","SARS-CoV-2","ATACAAACGAAAAGTG",9,285.91,10.61,-0.16,0.03,2.91,1.03,0,">1 nonsynonymous","S129K S184L",2
"lib1","SARS-CoV-2","ATACAAACGACAAGGA",3,335.29,7.26,-3.51,0.26,1.5,1.12,0.02,">1 nonsynonymous","N4I T46L V71I K114E Y123Q T201R",6
"lib1","SARS-CoV-2","ATACAAACGTATTTTG",2,56.77,9.3,-1.47,0.14,1.82,1.12,0.01,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","ATACAAAGAATGAAAT",1,23,10.69,-0.07,0.04,2.98,1,0,">1 nonsynonymous","T63S K128S S139G",3
"lib1","SARS-CoV-2","ATACAAAGATCAATCA",3,58.02,10.47,-0.3,0.05,2.8,1.04,0,"1 nonsynonymous","F134C",1
"lib1","SARS-CoV-2","ATACAAAGCAGTATTG",4,150.6,8.28,-2.48,0.16,2.13,1.1,0.01,">1 nonsynonymous","Y119S Y165H",2
"lib1","SARS-CoV-2","ATACAAAGCGACAGCT",4,46.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P96W N107Q C158I",3
"lib1","SARS-CoV-2","ATACAAATAAAAACTA",1,16.59,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","G9E D97Q G101Y T140P T170G P197D",6
"lib1","SARS-CoV-2","ATACAAATAAAAGCGT",15,130.83,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","S29V T46P T55L I72L G83A",5
"lib1","SARS-CoV-2","ATACAAATACGAAATT",10,143.5,10.86,0.1,0.11,2.91,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ATACAAATCAAAAAAG",3,57.28,6,-4.76,1.31,1.5,1.16,0.03,">1 nonsynonymous","Y66L D112M Y119L G152S",4
"lib1","SARS-CoV-2","ATACAAATCATGATTT",1,20.18,10.63,-0.13,0.05,2.91,1,0,">1 nonsynonymous","N151L Q163W",2
"lib1","SARS-CoV-2","ATACAAATTAATTAGT",11,77.06,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","D68R Y93G T201M",3
"lib1","SARS-CoV-2","ATACAAATTAGAATAA",2,12.36,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","C6T K94M Y143M",3
"lib1","SARS-CoV-2","ATACAAATTCTTAAAG",1,25.74,10.75,-0.01,0.09,2.91,1,0,">1 nonsynonymous","G83K S139N",2
"lib1","SARS-CoV-2","ATACAACAACCTTAGA",3,45.3,8.39,-2.38,0.13,2.04,1.11,0.01,">1 nonsynonymous","N107I Q168R",2
"lib1","SARS-CoV-2","ATACAACAATATACAT",6,100.46,10.78,0.01,0.05,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATACAACACAGCGGGT",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23F V37E",2
"lib1","SARS-CoV-2","ATACAACAGATCTAAC",4,19.91,6.87,-3.89,0.38,1.5,1.02,0.04,">1 nonsynonymous","C6Y F12D G86A N151Q F156M",5
"lib1","SARS-CoV-2","ATACAACAGCCTACGA",5,152.35,9.45,-1.32,0.14,1.79,1.1,0.01,">1 nonsynonymous","I28Q T140L S147T",3
"lib1","SARS-CoV-2","ATACAACAGCTAGATT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","S36* N171E",2
"lib1","SARS-CoV-2","ATACAACCAAGCAAAA",2,13.58,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","T3V N92I K132P",3
"lib1","SARS-CoV-2","ATACAACCACCTTGGG",13,66.97,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8V A33Q G116R C150G",4
"lib1","SARS-CoV-2","ATACAACCCACACATA",1,18.09,8.23,-2.53,0.14,1.88,1.05,0.01,">1 nonsynonymous","N120D A145N G174M",3
"lib1","SARS-CoV-2","ATACAACCCACAGAAA",2,54.08,10.14,-0.62,0.11,2.53,1.04,0,">1 nonsynonymous","D59W D90T",2
"lib1","SARS-CoV-2","ATACAACGAACATTAC",7,227.94,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4Y S19L S69L G83P C102I V173L Y178G",7
"lib1","SARS-CoV-2","ATACAACGAGACTGTC",7,121.24,9.92,-0.85,0.06,2.94,1.02,0,">1 nonsynonymous","V153A T170F S200L",3
"lib1","SARS-CoV-2","ATACAACGTTGTACCA",2,36.34,9.63,-1.13,0.16,2.25,1.07,0.01,">1 nonsynonymous","E135Y G152F F156P",3
"lib1","SARS-CoV-2","ATACAACGTTTCCAAA",5,40.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K26P Y39S G83F G152A",4
"lib1","SARS-CoV-2","ATACAACTATATAGGG",15,211.71,10.37,-0.4,0.03,2.81,1.04,0,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","ATACAACTGATATCAG",3,13.82,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I88R R127T",2
"lib1","SARS-CoV-2","ATACAACTTGTAATTT",10,92.84,9.55,-1.21,0.11,1.83,1.12,0,">1 nonsynonymous","G9M Y35R D90A",3
"lib1","SARS-CoV-2","ATACAACTTTTTAGTT",2,72.95,9.5,-1.26,0.12,1.88,1.09,0,">1 nonsynonymous","W23F L38H",2
"lib1","SARS-CoV-2","ATACAAGAAAGACAAA",1,28,10.18,-0.59,0.09,2.64,1,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","ATACAAGACACTATAT",3,43.3,9.16,-1.6,0.1,2.78,1.11,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","ATACAAGCATACGATG",3,65.04,10.98,0.21,0.08,2.91,1.03,0,">1 nonsynonymous","L5S Q168H",2
"lib1","SARS-CoV-2","ATACAAGCCCAATATA",3,18.77,8.64,-2.12,0.17,2.58,1.03,0.01,">1 nonsynonymous","C61Y N157M",2
"lib1","SARS-CoV-2","ATACAAGCGCTGGCAT",1,24.87,10.35,-0.42,0.1,2.77,1.11,0.01,">1 nonsynonymous","A105G V173F",2
"lib1","SARS-CoV-2","ATACAAGGATTGTAAT",4,79.31,10.06,-0.7,0.11,2.56,1.01,0.01,"1 nonsynonymous","F47H",1
"lib1","SARS-CoV-2","ATACAAGGGCCACCGA",5,1.24,NA,NA,NA,NA,NA,NA,"stop","I80L D90R L122* G174S",4
"lib1","SARS-CoV-2","ATACAAGGTACAACTA",4,45.52,10.69,-0.07,0.05,2.94,1.06,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","ATACAAGTAGTACTAA",4,31.37,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y91F N110M R124S",3
"lib1","SARS-CoV-2","ATACAAGTCTTCCTAA",5,29.54,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y91R D97V Y159G",3
"lib1","SARS-CoV-2","ATACAAGTTTGTTGGA",1,27.13,9,-1.76,0.11,1.71,1.11,0.01,">1 nonsynonymous","A33K W106Q",2
"lib1","SARS-CoV-2","ATACAATAAAAAATTT",5,0.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","ATACAATAAACTATAA",3,15.44,6.74,-4.02,0.77,1.5,1.06,0.08,">1 nonsynonymous","V77Y D90C E141D",3
"lib1","SARS-CoV-2","ATACAATAAGAGACAG",4,10.9,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","E10D P82F D90R Q144L Q176T",5
"lib1","SARS-CoV-2","ATACAATACTTTCCTT",8,124.86,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","P54F T63R G117V G146L Y159A P177L T201V",7
"lib1","SARS-CoV-2","ATACAATATCGCTTTA",4,0.34,NA,NA,NA,NA,NA,NA,"stop","G9S G83* E135M P169L",4
"lib1","SARS-CoV-2","ATACAATATTGCTATC",12,69.67,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","W106S S113I Y119S P149M",4
"lib1","SARS-CoV-2","ATACAATCACAAGTAA",2,101.48,10.74,-0.02,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACAATCCGGCCTTA",6,7.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34N F47E N64M",3
"lib1","SARS-CoV-2","ATACAATCGCTTGGAA",3,21.94,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","I88G G117R L131W",3
"lib1","SARS-CoV-2","ATACAATGAAACAAAT",8,0.79,NA,NA,NA,NA,NA,NA,"stop","T15* R25F V37N",3
"lib1","SARS-CoV-2","ATACAATGATATAAAA",9,132.74,8.44,-2.33,0.13,2.23,1.11,0.01,">1 nonsynonymous","I28G Y119T",2
"lib1","SARS-CoV-2","ATACAATTATAGTATT",3,25.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y35S D68A S129I",3
"lib1","SARS-CoV-2","ATACAATTCATTTACA",6,76.7,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y21E L95R P161V G172K",4
"lib1","SARS-CoV-2","ATACAATTGAGTTCAG",12,42.63,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61I F70W G86V Y119D R179W",5
"lib1","SARS-CoV-2","ATACAATTGTCAACAT",3,42.53,6,-4.76,1.4,1.5,1.19,0.06,">1 nonsynonymous","A42G C61D F99S Y119L P149A P161S",6
"lib1","SARS-CoV-2","ATACAATTGTTAGCTT",1,101.24,9.29,-1.47,0.08,2.19,1.08,0,">1 nonsynonymous","S29E D97I Y165M",3
"lib1","SARS-CoV-2","ATACAATTTAGATGTA",1,44.63,10.82,0.05,0.08,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACACAAAAAACCTA",8,22.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9Y T85D P96Q S129M N151A",5
"lib1","SARS-CoV-2","ATACACAAAAAAGGCC",16,116.42,7.89,-2.87,0.19,1.5,1.1,0.01,">1 nonsynonymous","F44Y C61I W106M T148V G152L",5
"lib1","SARS-CoV-2","ATACACAAACGACATT",2,12.83,10.99,0.22,0.11,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACACAATAAAGGTA",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V S41M A89L",3
"lib1","SARS-CoV-2","ATACACAATACAAGTT",1,5.03,NA,NA,NA,NA,NA,NA,"stop","L122* G166I R179S",3
"lib1","SARS-CoV-2","ATACACAATCTTTCAT",4,13.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S53F T55I Y91N C150I",4
"lib1","SARS-CoV-2","ATACACAATTGGAATA",5,102.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28V D90V G117D Y175T",4
"lib1","SARS-CoV-2","ATACACACAAATGCCC",9,82.23,10.82,0.05,0.08,2.89,1.06,0,">1 nonsynonymous","L122M T201V",2
"lib1","SARS-CoV-2","ATACACACAGCGGTCA",2,47.74,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N4C V103L F134L",3
"lib1","SARS-CoV-2","ATACACACATAAACCA",4,31.45,8.6,-2.16,0.21,1.66,1.09,0.02,"1 nonsynonymous","G86M",1
"lib1","SARS-CoV-2","ATACACACCAAAGTCT",3,38.04,10.64,-0.12,0.05,2.88,1.07,0,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","ATACACACGCTGAAAT",4,27.51,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F8Y T55G I80Y K114G",4
"lib1","SARS-CoV-2","ATACACACTAAAAATA",4,7.73,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R27L A42F K48D P161C Q168R G174V",6
"lib1","SARS-CoV-2","ATACACACTCATACGC",3,34.48,6.35,-4.41,0.65,1.5,1.14,0.03,">1 nonsynonymous","Y121P D137K P149H",3
"lib1","SARS-CoV-2","ATACACACTGTGTCCC",11,97.58,6,-4.76,1.06,1.5,1.2,0.02,">1 nonsynonymous","F12M A67P H189F",3
"lib1","SARS-CoV-2","ATACACAGATCCTCCG",2,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S200P",1
"lib1","SARS-CoV-2","ATACACAGCAACTATC",3,61.94,9.48,-1.28,0.12,1.71,1.09,0.01,">1 nonsynonymous","N58M F99L F126M",3
"lib1","SARS-CoV-2","ATACACAGCTTTATGT",3,36.01,8.72,-2.04,0.09,2.88,1.1,0,">1 nonsynonymous","C61H Y119E T140I P149T",4
"lib1","SARS-CoV-2","ATACACAGGCAGGTGC",6,233.49,8.71,-2.06,0.09,2.83,1.07,0,">1 nonsynonymous","S41N N64G T170Y G174L",4
"lib1","SARS-CoV-2","ATACACATAGGGCCCG",1,0.27,NA,NA,NA,NA,NA,NA,"stop","I2N D34R F99A C195*",4
"lib1","SARS-CoV-2","ATACACATATGACACC",2,47.04,10.78,0.01,0.05,2.86,1.1,0,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","ATACACATCACGAATC",1,12.96,10.79,0.02,0.05,2.92,1.07,0,">1 nonsynonymous","K128T P149T",2
"lib1","SARS-CoV-2","ATACACATCCTAAAAA",1,36.27,10.25,-0.51,0.07,2.78,1.03,0,">1 nonsynonymous","I2N G51M",2
"lib1","SARS-CoV-2","ATACACATGAATCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107F Y121N R179A",3
"lib1","SARS-CoV-2","ATACACATGACCTTTA",1,16.92,10.16,-0.61,0.15,2.45,1,0.01,"1 nonsynonymous","D34I",1
"lib1","SARS-CoV-2","ATACACATTGATAATA",1,15.98,9.61,-1.16,0.28,1.5,1,0.05,">1 nonsynonymous","N1V V77K",2
"lib1","SARS-CoV-2","ATACACATTGATTGCT",6,0.31,NA,NA,NA,NA,NA,NA,"stop","P7T G83*",2
"lib1","SARS-CoV-2","ATACACCAATAGAACG",3,14.46,6,-4.76,1.65,3,1.15,0.01,"1 nonsynonymous","I88D",1
"lib1","SARS-CoV-2","ATACACCCACCTGGAG",6,2.25,NA,NA,NA,NA,NA,NA,"stop","W106* R127T P149L N157I",4
"lib1","SARS-CoV-2","ATACACCCATCCCTTA",2,26.35,10.1,-0.66,0.13,2.81,1.03,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","ATACACCCGTAGAGAA",6,42.55,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K56G G86C R127T",3
"lib1","SARS-CoV-2","ATACACCCGTTAACAC",7,110.38,10.38,-0.39,0.06,2.88,1.01,0,">1 nonsynonymous","D98G Q144N P149N",3
"lib1","SARS-CoV-2","ATACACCCTGGCTTCC",5,6.31,NA,NA,NA,NA,NA,NA,"stop","G9V S45E K87F I104* V180*",5
"lib1","SARS-CoV-2","ATACACCGAACGTACA",2,0.32,NA,NA,NA,NA,NA,NA,"stop","T3D A42V V77Y S139*",4
"lib1","SARS-CoV-2","ATACACCGCTCCGCAA",2,6.52,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V103S N130F",2
"lib1","SARS-CoV-2","ATACACCTAGGCCAAT",4,1.65,NA,NA,NA,NA,NA,NA,"stop","I28M N130K F156I L162*",4
"lib1","SARS-CoV-2","ATACACCTCGCCTCAA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S69L F99Y",3
"lib1","SARS-CoV-2","ATACACCTGGACCCTA",5,61.79,6.07,-4.7,1.01,1.5,1.19,0.03,">1 nonsynonymous","I28K C158L",2
"lib1","SARS-CoV-2","ATACACGAATATAATC",8,28.62,9.63,-1.14,0.24,1.7,1.2,0.02,">1 nonsynonymous","A14V A42D Q144Y",3
"lib1","SARS-CoV-2","ATACACGAATATGGAT",1,12.52,10.95,0.18,0.1,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACACGACATAAAAC",6,0.1,NA,NA,NA,NA,NA,NA,"stop","S19* G74E G101K Y143V P169D S200V",6
"lib1","SARS-CoV-2","ATACACGAGAATATGA",1,21.79,10.74,-0.02,0.05,2.93,1.04,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","ATACACGAGGTCACAC",2,36.8,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F62C V103M R127M",3
"lib1","SARS-CoV-2","ATACACGATAAGGTTT",1,14.4,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K94Q L131W",2
"lib1","SARS-CoV-2","ATACACGATTGACCAC",1,7.12,9.79,-0.97,0.34,1.91,1.17,0.02,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","ATACACGCAAGTCGAA",3,20.26,9.17,-1.59,0.27,1.5,1,0.03,">1 nonsynonymous","G9E A89N D98V",3
"lib1","SARS-CoV-2","ATACACGCCAGAAAAA",3,38.67,10.73,-0.03,0.04,2.98,1.02,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","ATACACGCCATACACA",1,23.09,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","F160P G172R",2
"lib1","SARS-CoV-2","ATACACGGAAATAACT",2,52.66,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S19G V37P G51W L187G",4
"lib1","SARS-CoV-2","ATACACGTGATGTATC",1,22.5,10.59,-0.17,0.14,2.79,1.04,0.01,"1 nonsynonymous","F160C",1
"lib1","SARS-CoV-2","ATACACTAAATACAAT",2,16.39,10.56,-0.21,0.07,2.98,1,0,">1 nonsynonymous","V37N T46S V115D",3
"lib1","SARS-CoV-2","ATACACTATATTAATG",4,62.54,10.37,-0.39,0.07,2.62,1.06,0,">1 nonsynonymous","N1M R16E K56P Q163V",4
"lib1","SARS-CoV-2","ATACACTATGTGTCTT",13,184.03,6,-4.76,1.43,1.5,1.13,0,">1 nonsynonymous","F12K E141S Y175R",3
"lib1","SARS-CoV-2","ATACACTATTCTAGAC",6,100.43,9.52,-1.24,0.04,2.85,1.09,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","ATACACTCATCTTGGC",5,14.75,NA,NA,NA,NA,NA,NA,"stop","D68* K199G",2
"lib1","SARS-CoV-2","ATACACTCCCAACGAT",3,12.7,6.66,-4.11,0.72,1.5,1.15,0.07,">1 nonsynonymous","F47N N58S D98V G116L F167H",5
"lib1","SARS-CoV-2","ATACACTGAAATAAAG",1,11.33,8.61,-2.15,0.19,2.49,1.1,0.02,">1 nonsynonymous","N64W G146M",2
"lib1","SARS-CoV-2","ATACACTGAACATACG",4,42.53,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Y39V L60R L95T G101V T140W",5
"lib1","SARS-CoV-2","ATACACTTAGATAGTA",4,53.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N24T F44I L57K F62V F134R E141L",6
"lib1","SARS-CoV-2","ATACACTTCAAACCAA",1,28.73,10.61,-0.15,0.06,2.9,1.06,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","ATACACTTTTTCTGAT",2,61.9,10.79,0.03,0.06,2.91,1.05,0,">1 nonsynonymous","E10D D59T",2
"lib1","SARS-CoV-2","ATACAGAAAAAGTGAA",7,44.18,7.11,-3.65,0.25,1.5,1.12,0.02,">1 nonsynonymous","Y35F P133L Y165H",3
"lib1","SARS-CoV-2","ATACAGAAAAGCGTAG",3,24.04,10.62,-0.15,0.16,2.82,1.08,0.01,"1 nonsynonymous","T148H",1
"lib1","SARS-CoV-2","ATACAGAAAGCGCATA",4,45.22,6.24,-4.53,0.75,1.5,1.23,0.03,">1 nonsynonymous","A22K K87Q S113L C150K",4
"lib1","SARS-CoV-2","ATACAGAACAGCTAGC",3,53.3,10.66,-0.1,0.11,2.84,1,0,">1 nonsynonymous","S29T K198A",2
"lib1","SARS-CoV-2","ATACAGAACGACTGTG",5,69.05,9.87,-0.89,0.08,2.43,1.05,0,">1 nonsynonymous","T3Q D90I",2
"lib1","SARS-CoV-2","ATACAGAAGTCTAGTC",1,0.43,NA,NA,NA,NA,NA,NA,"stop","N1L K56H A81F G86* R179P",5
"lib1","SARS-CoV-2","ATACAGACCATCTTGG",12,126.65,10.45,-0.31,0.05,2.86,1.04,0,">1 nonsynonymous","T55D S129G T140P E154T",4
"lib1","SARS-CoV-2","ATACAGACGCCTCAAA",10,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M N40V K128Y Y175I",4
"lib1","SARS-CoV-2","ATACAGACGTTTGACC",2,63.94,10.63,-0.13,0.06,2.9,1.02,0,">1 nonsynonymous","Q84L T148R P197H",3
"lib1","SARS-CoV-2","ATACAGAGATAAACTA",2,21.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S45V P96M P161M",3
"lib1","SARS-CoV-2","ATACAGATTAATCAAT",2,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I K56L N107Q F126N",4
"lib1","SARS-CoV-2","ATACAGCAAAATCTAA",2,17.75,10.48,-0.29,0.11,2.89,1.01,0,">1 nonsynonymous","D59S D75L",2
"lib1","SARS-CoV-2","ATACAGCATTCCTCCT",2,18.82,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y39W G86E S113C",3
"lib1","SARS-CoV-2","ATACAGCCATACAATC",1,0.57,NA,NA,NA,NA,NA,NA,"stop","R16L A42* C61D Y66S N110L L162C K198M",7
"lib1","SARS-CoV-2","ATACAGCCCGCAACAA",10,192.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29L K87T Y91D F134E",4
"lib1","SARS-CoV-2","ATACAGCCGCGCTCGG",4,2.39,NA,NA,NA,NA,NA,NA,"stop","R27* Y39S G116C S139R Q176P",5
"lib1","SARS-CoV-2","ATACAGCTAACAAAAA",2,1.26,NA,NA,NA,NA,NA,NA,"stop","L5Y T15S N24F G152M T170P S200*",6
"lib1","SARS-CoV-2","ATACAGCTGTCGCGCT",5,39.33,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61P G86V Y93V E186D",4
"lib1","SARS-CoV-2","ATACAGCTTCCATACT",2,26.93,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5G S19L S41R G86L F99V R179L H189C",7
"lib1","SARS-CoV-2","ATACAGGAACCTTTCA",4,50.38,10.69,-0.07,0.05,2.93,1.05,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","ATACAGGACAGATCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36L L60M E76* P82I G196V",5
"lib1","SARS-CoV-2","ATACAGGACGGGATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V77Y D97* A105E K128G",4
"lib1","SARS-CoV-2","ATACAGGAGACAGGAT",3,7.65,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","G9V S41N S43F R73V N118R E186S S200I",7
"lib1","SARS-CoV-2","ATACAGGAGGAAACCT",2,19.54,6.68,-4.08,0.41,2.56,1.1,0.02,">1 nonsynonymous","P82Q F167L C195H",3
"lib1","SARS-CoV-2","ATACAGGATAATAATA",4,10.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I88A Q144H",2
"lib1","SARS-CoV-2","ATACAGGATGCATAAA",8,115.78,9.61,-1.15,0.05,2.88,1.07,0,"1 nonsynonymous","Y119Q",1
"lib1","SARS-CoV-2","ATACAGGCATCTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56R S129*",2
"lib1","SARS-CoV-2","ATACAGGCTAGAGAAA",2,77.01,10.29,-0.47,0.08,2.88,1,0,"1 nonsynonymous","G155W",1
"lib1","SARS-CoV-2","ATACAGGGAATACAGG",3,78.66,10.15,-0.61,0.05,2.78,1.02,0,">1 nonsynonymous","E10W S200R",2
"lib1","SARS-CoV-2","ATACAGGGTTAAACGT",4,24.62,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","Y35E I88N N107V A190I",4
"lib1","SARS-CoV-2","ATACAGGTCGTATAAA",4,10.75,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","F12D G83E T201L",3
"lib1","SARS-CoV-2","ATACAGGTCTACCAAT",1,29.24,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R25V F44D G101Y N107Y Q144I",5
"lib1","SARS-CoV-2","ATACAGTAAATATATG",1,21.6,7.96,-2.8,0.34,1.5,1.02,0.04,">1 nonsynonymous","S41P S113K N120M",3
"lib1","SARS-CoV-2","ATACAGTAAGCGGGAT",4,23.42,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","R25S F47T C61S Y66N S129L F160Y",6
"lib1","SARS-CoV-2","ATACAGTATAAAAACA",2,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F N40I T85D Y91S N171C",5
"lib1","SARS-CoV-2","ATACAGTCAATCATAA",2,21.4,9.23,-1.53,0.11,2.29,1.05,0,">1 nonsynonymous","S139E P161S",2
"lib1","SARS-CoV-2","ATACAGTCACTCAAAT",3,19.44,7.04,-3.72,0.5,1.5,1.12,0.07,">1 nonsynonymous","F12D V103L Y123L G174W",4
"lib1","SARS-CoV-2","ATACAGTCAGAACCAC",1,31.59,10.61,-0.16,0.14,2.81,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATACAGTCCGTTGGCG",7,29.3,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L5K V103S P169Q",3
"lib1","SARS-CoV-2","ATACAGTCGCAATATG",4,1.05,NA,NA,NA,NA,NA,NA,"stop","L5* G116L",2
"lib1","SARS-CoV-2","ATACAGTCTAGTCAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T L162S S200L",3
"lib1","SARS-CoV-2","ATACAGTGGATAGACA",5,0.27,NA,NA,NA,NA,NA,NA,"stop","G9S N120* L131E",3
"lib1","SARS-CoV-2","ATACAGTGGTTTCCCT",1,13.32,10.95,0.19,0.13,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACAGTGTACTCGAT",3,74.81,10.7,-0.06,0.08,2.89,1.01,0,"1 nonsynonymous","N30K",1
"lib1","SARS-CoV-2","ATACATAAAACCACCA",2,6.64,10.5,-0.27,0.08,2.86,1.07,0,">1 nonsynonymous","E10V G155K",2
"lib1","SARS-CoV-2","ATACATAAATCAAGTA",5,38.43,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","L57T Q84R N118F K128L G146A",5
"lib1","SARS-CoV-2","ATACATAAATTATAAA",3,48.08,10.88,0.11,0.1,2.81,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACATAAGCCTTTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","R16* I88* D98S I138Q E154T F160D",6
"lib1","SARS-CoV-2","ATACATAATCAGTGCG",10,263.24,10.35,-0.41,0.02,2.86,1.05,0,">1 nonsynonymous","N40F T140R",2
"lib1","SARS-CoV-2","ATACATAATGAAACCA",10,6.96,NA,NA,NA,NA,NA,NA,"stop","E10L N58S A105L T201*",4
"lib1","SARS-CoV-2","ATACATAATGAATCAA",10,42.04,6.46,-4.3,0.47,1.5,1.09,0.03,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","ATACATAATTACATAG",1,37.7,8.19,-2.57,0.19,2.24,1.13,0.01,">1 nonsynonymous","L5C S113I",2
"lib1","SARS-CoV-2","ATACATACACTGCGTA",4,23.22,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y91E Y119L S139C V173R",4
"lib1","SARS-CoV-2","ATACATACCACTTTTG",1,43.72,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C61T R127S R136M G152I P177H",5
"lib1","SARS-CoV-2","ATACATACCATAGACT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","I2S T15G S29Q F44* T63I D90V I104M",7
"lib1","SARS-CoV-2","ATACATACTACCCTAG",1,33.46,10.8,0.03,0.13,2.86,1.07,0,">1 nonsynonymous","V37D S200D",2
"lib1","SARS-CoV-2","ATACATACTGCAACAA",2,56.84,10.15,-0.61,0.07,2.75,1,0,"1 nonsynonymous","R136N",1
"lib1","SARS-CoV-2","ATACATACTGCCTTCG",11,189.27,10.13,-0.63,0.06,2.63,1,0,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","ATACATACTTACTTAG",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29D V37T G152Y G166T",4
"lib1","SARS-CoV-2","ATACATAGACCCAAGT",9,183.34,8.37,-2.39,0.14,1.78,1.12,0.01,">1 nonsynonymous","T46I F167L",2
"lib1","SARS-CoV-2","ATACATAGATATCTAG",3,38.55,10.48,-0.28,0.05,2.93,1.01,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","ATACATATCCTAGGTA",2,20.03,9.55,-1.22,0.12,1.71,1.05,0.01,">1 nonsynonymous","C6Q Y123L",2
"lib1","SARS-CoV-2","ATACATATCTGACATT",3,72.19,10.7,-0.06,0.03,2.93,1.02,0,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","ATACATATGAAACGAC",3,48.82,8.03,-2.73,0.15,1.7,1.15,0.01,">1 nonsynonymous","S36N F44N D98G L122M G174V",5
"lib1","SARS-CoV-2","ATACATATGATAGCCT",7,141,9.58,-1.19,0.11,1.91,1.12,0.01,">1 nonsynonymous","A14C Y35G N58T T201C",4
"lib1","SARS-CoV-2","ATACATATTACCCTTT",2,0.12,NA,NA,NA,NA,NA,NA,"stop","R16* L57S G86* Y121H F156Y",5
"lib1","SARS-CoV-2","ATACATCAAAGCAAAG",1,7.04,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","I88G P96R Y143N G152I F167R",5
"lib1","SARS-CoV-2","ATACATCAACTATGAT",9,1.7,NA,NA,NA,NA,NA,NA,"stop","Y39* S43K",2
"lib1","SARS-CoV-2","ATACATCACAGTTGAT",4,0.48,NA,NA,NA,NA,NA,NA,"stop","G74Q Y91R V103E G155* Q176P",5
"lib1","SARS-CoV-2","ATACATCACATGGCTA",8,85.66,8.97,-1.79,0.09,2.78,1.11,0,">1 nonsynonymous","T148P G166T",2
"lib1","SARS-CoV-2","ATACATCACTCACAAA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K T140C",2
"lib1","SARS-CoV-2","ATACATCAGTGATCTT",9,1.63,NA,NA,NA,NA,NA,NA,"stop","V37P F44* P54N G174V G196Y",5
"lib1","SARS-CoV-2","ATACATCATGACGTAC",4,44.92,10.13,-0.63,0.07,2.87,1,0,">1 nonsynonymous","K87G D98E",2
"lib1","SARS-CoV-2","ATACATCATGTAAAGT",1,11.3,10.53,-0.23,0.09,2.91,1.05,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","ATACATCCACACTTGT",4,1.08,NA,NA,NA,NA,NA,NA,"stop","R27S L38V K128V I138L N151E E154*",6
"lib1","SARS-CoV-2","ATACATCCCCTAACCA",1,61.06,10.79,0.02,0.07,2.99,1,0,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","ATACATCGCTATCTGT",6,69.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P82L Y121V",2
"lib1","SARS-CoV-2","ATACATCGTACCGAAG",2,22.62,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37Y I80P G116A P133R E154I",5
"lib1","SARS-CoV-2","ATACATCGTTGCTGCC",7,56.44,9.4,-1.36,0.13,1.75,1.11,0.01,">1 nonsynonymous","K56S R127L",2
"lib1","SARS-CoV-2","ATACATCTAATTTTGT",13,119.44,8.93,-1.83,0.09,1.82,1.1,0,">1 nonsynonymous","R127T K199F",2
"lib1","SARS-CoV-2","ATACATCTATAGACAG",4,102.46,10.71,-0.06,0.07,2.91,1.05,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","ATACATGAAGGGAATT",1,11.36,10.47,-0.29,0.09,2.86,1,0,">1 nonsynonymous","S43P K56M F160C",3
"lib1","SARS-CoV-2","ATACATGACCGAGAAC",4,69.93,8.57,-2.19,0.27,1.5,1.07,0.03,">1 nonsynonymous","L5E L95A",2
"lib1","SARS-CoV-2","ATACATGACGCTCCAG",8,1.07,NA,NA,NA,NA,NA,NA,"stop","A89F L125A G196*",3
"lib1","SARS-CoV-2","ATACATGAGTAGTTCT",1,6.79,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N92S V103T",2
"lib1","SARS-CoV-2","ATACATGATATAATGT",2,37.55,10.85,0.08,0.08,2.95,1.02,0,"1 nonsynonymous","Y39W",1
"lib1","SARS-CoV-2","ATACATGCCAGCAAGA",3,37.3,8.38,-2.38,0.14,2.01,1.14,0.01,">1 nonsynonymous","Y35N F62N Y119R Q163R",4
"lib1","SARS-CoV-2","ATACATGCCCAGATGG",1,27.56,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y50A R73N L162K",3
"lib1","SARS-CoV-2","ATACATGCGACTCTCC",2,50.12,10.73,-0.03,0.11,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACATGGCTATAATT",2,60.88,10.46,-0.3,0.06,2.93,1,0,"1 nonsynonymous","F44H",1
"lib1","SARS-CoV-2","ATACATGTAAGACCTT",3,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G G83C",2
"lib1","SARS-CoV-2","ATACATGTATTCCATG",2,0.53,NA,NA,NA,NA,NA,NA,"stop","P82V S200*",2
"lib1","SARS-CoV-2","ATACATGTGTAGCCAT",1,42.27,10.81,0.05,0.08,2.93,1.07,0,"1 nonsynonymous","N64H",1
"lib1","SARS-CoV-2","ATACATGTTTTATTAA",1,47.75,10.8,0.04,0.05,2.94,1.07,0,"1 nonsynonymous","V153M",1
"lib1","SARS-CoV-2","ATACATTAAAAAACGA",7,18.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N107T G152R L183T",3
"lib1","SARS-CoV-2","ATACATTAAACGAGGA",4,105.48,10.76,0,0.06,2.9,1.07,0,">1 nonsynonymous","N151A V173L",2
"lib1","SARS-CoV-2","ATACATTAGCAAGCCT",1,29.11,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6M F17K T140W Y178T",4
"lib1","SARS-CoV-2","ATACATTATGCCTAGT",4,13.33,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","V20K",1
"lib1","SARS-CoV-2","ATACATTCACTACAGG",9,7.53,NA,NA,NA,NA,NA,NA,"stop","S19L V37L F99V I104* L125E R136P T170Q P197R",8
"lib1","SARS-CoV-2","ATACATTCAGATCTAT",4,57.85,6.06,-4.71,0.5,1.5,1.13,0.01,">1 nonsynonymous","G51T Y119N F126Q",3
"lib1","SARS-CoV-2","ATACATTCGATTTTGC",2,49.87,10.72,-0.04,0.04,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACATTCTCTGTACA",4,34.53,9.61,-1.15,0.08,1.86,1.02,0,">1 nonsynonymous","G83V F160L A190F",3
"lib1","SARS-CoV-2","ATACATTCTTGTAATC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","A14* C61L",2
"lib1","SARS-CoV-2","ATACATTGAACGGAAG",2,49.88,10.71,-0.06,0.09,2.84,1.09,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","ATACATTTATATGGCA",7,87.78,10.68,-0.08,0.07,2.98,1,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","ATACATTTGCTCTACG",2,0.45,NA,NA,NA,NA,NA,NA,"stop","I2* A14I V103D S139V V173T",5
"lib1","SARS-CoV-2","ATACATTTGTTAAAAA",2,36.1,6,-4.76,1.62,3,1.14,0,">1 nonsynonymous","Y50L I88R P96C G155A",4
"lib1","SARS-CoV-2","ATACCAAAAATTGGGC",12,103.58,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L122S I142R Q176R V182F",4
"lib1","SARS-CoV-2","ATACCAAAACTAAACT",2,39.23,10.5,-0.26,0.18,2.55,1,0.01,">1 nonsynonymous","R16L F160L",2
"lib1","SARS-CoV-2","ATACCAAAACTAATAA",2,12.55,10.42,-0.34,0.06,2.96,1.02,0,"1 nonsynonymous","A145I",1
"lib1","SARS-CoV-2","ATACCAAACTTCATTA",1,23.14,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F17L T46L G86L",3
"lib1","SARS-CoV-2","ATACCAAAGAACTCAA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","A18* N24Q G74C G152V",4
"lib1","SARS-CoV-2","ATACCAAATGTAAAAG",2,1.96,NA,NA,NA,NA,NA,NA,"stop","R25* S36H Y50P F62W",4
"lib1","SARS-CoV-2","ATACCAAATTACTAAT",2,26.24,10.67,-0.09,0.05,2.94,1.05,0,">1 nonsynonymous","P7E K198Q",2
"lib1","SARS-CoV-2","ATACCAAATTTAATCA",5,23.44,8.66,-2.1,0.24,1.5,1.24,0.03,">1 nonsynonymous","T3F S36T F99L",3
"lib1","SARS-CoV-2","ATACCAACACTCTAAG",5,29.67,7.08,-3.68,0.64,1.5,1.04,0.06,">1 nonsynonymous","D34L L95M A145V C150E",4
"lib1","SARS-CoV-2","ATACCAACATGCGGAC",1,48.28,6.07,-4.69,1.23,1.5,1.25,0.03,">1 nonsynonymous","G9L A22T L60P Y91L S139T",5
"lib1","SARS-CoV-2","ATACCAACATTTTTAC",1,34.59,7.32,-3.44,0.27,1.74,1.18,0.02,">1 nonsynonymous","R16F Y159C",2
"lib1","SARS-CoV-2","ATACCAACGACCTTTG",6,0.45,NA,NA,NA,NA,NA,NA,"stop","K26M V37* F47G Y66F Y91K",5
"lib1","SARS-CoV-2","ATACCAACTTATATAT",4,108.31,8.89,-1.88,0.12,2,1.09,0.01,">1 nonsynonymous","C61V G174H V181L",3
"lib1","SARS-CoV-2","ATACCAAGGGTATGGA",1,92.04,10.62,-0.15,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCAAGTTTGATTA",2,7.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63D V103L",2
"lib1","SARS-CoV-2","ATACCAATAACGAAAG",5,30.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6W L95I S113K F167V",4
"lib1","SARS-CoV-2","ATACCAATAACGAGTT",5,60.81,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","F44T I142P V182L",3
"lib1","SARS-CoV-2","ATACCAATTACTAGAC",2,26,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F167D P169A T201R",3
"lib1","SARS-CoV-2","ATACCAATTTTTAACT",1,12.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","ATACCACAACTGGCTA",6,35.34,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","K48N T63Q E76T L125T N171P C195L",6
"lib1","SARS-CoV-2","ATACCACAATATCAAG",5,49.51,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P82L L95V Y175F T201V",4
"lib1","SARS-CoV-2","ATACCACACATAATCA",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119S Q163A G174M",3
"lib1","SARS-CoV-2","ATACCACACTCACATT",8,87.71,10.66,-0.1,0.06,2.93,1.04,0,">1 nonsynonymous","N4R S129H",2
"lib1","SARS-CoV-2","ATACCACAGCGCCTAT",5,81.14,6.22,-4.55,0.55,1.5,1.22,0.01,">1 nonsynonymous","N1S V37L C61A D112M S184I",5
"lib1","SARS-CoV-2","ATACCACATCCAATAC",2,36.61,10.71,-0.05,0.04,2.93,1.07,0,">1 nonsynonymous","N64R S129V",2
"lib1","SARS-CoV-2","ATACCACATTCAAATA",1,85.34,10.67,-0.09,0.03,2.91,1.04,0,"1 nonsynonymous","A14K",1
"lib1","SARS-CoV-2","ATACCACCAACCGGCG",9,116.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41G L57N Y175D",3
"lib1","SARS-CoV-2","ATACCACCATTTATAA",1,81.15,9.71,-1.05,0.09,2.74,1.04,0,">1 nonsynonymous","T55Y I142S",2
"lib1","SARS-CoV-2","ATACCACCCCATTAAG",1,24.03,10.66,-0.11,0.13,2.73,1.12,0.01,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","ATACCACCCTTGTGAT",3,21.45,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","V11Y Y50N L60I",3
"lib1","SARS-CoV-2","ATACCACGCCACCTAA",4,16.63,6,-4.76,2,1.5,1.08,0.05,">1 nonsynonymous","C49V G74L P82S",3
"lib1","SARS-CoV-2","ATACCACGGGTTAAAG",8,3.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","ATACCACTAATGATAT",8,100.72,10.54,-0.22,0.09,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCACTCCGAAATG",2,24.84,10.58,-0.19,0.07,2.87,1.06,0,">1 nonsynonymous","F44K K56Q",2
"lib1","SARS-CoV-2","ATACCAGAAGCGGTAC",4,24.8,7.1,-3.67,0.39,1.5,1.04,0.05,">1 nonsynonymous","W23H P169N N171D V182Y V194L",5
"lib1","SARS-CoV-2","ATACCAGGCCAGGCAA",2,38.63,10.44,-0.33,0.06,2.86,1.03,0,">1 nonsynonymous","K87L L122F",2
"lib1","SARS-CoV-2","ATACCAGGGCAACATG",2,34.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38P G116W K128R I142S",4
"lib1","SARS-CoV-2","ATACCAGGTAGAGTAA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","C61* E141*",2
"lib1","SARS-CoV-2","ATACCAGTCGTTTCTT",7,0,NA,NA,NA,NA,NA,NA,"stop","N1W T46I D75W T85S T100I Y119* R136S Q163I",8
"lib1","SARS-CoV-2","ATACCAGTGTCCCAGT",1,13.64,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I72V A89Y G101A",3
"lib1","SARS-CoV-2","ATACCAGTTACATCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","Y50L G146L G155* T201*",4
"lib1","SARS-CoV-2","ATACCATAAATTACAA",3,22.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y121L R136Y N157H L187N",4
"lib1","SARS-CoV-2","ATACCATAATCTGGTA",16,180.59,10.79,0.03,0.05,2.85,1.08,0,">1 nonsynonymous","L5K N64V",2
"lib1","SARS-CoV-2","ATACCATATAGCAGGA",5,0.42,NA,NA,NA,NA,NA,NA,"stop","A18* S36K E141S",3
"lib1","SARS-CoV-2","ATACCATATGATAATT",8,171.89,10.02,-0.74,0.05,2.73,1.02,0,">1 nonsynonymous","G9V S164L",2
"lib1","SARS-CoV-2","ATACCATCAGCCGAAA",2,18.2,10.7,-0.07,0.12,2.67,1.31,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ATACCATGACAACTAC",3,10.03,6,-4.76,1.74,1.5,1.19,0.03,">1 nonsynonymous","S53Y F62R N107C T140R E186I",5
"lib1","SARS-CoV-2","ATACCATGCTAACTAG",5,55.64,8.37,-2.4,0.15,2.85,1,0.01,">1 nonsynonymous","K128Q Y175S S200T",3
"lib1","SARS-CoV-2","ATACCATGTCAATCTG",1,39.77,10.76,-0.01,0.08,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCATGTCCGCTTA",6,24.19,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y66V G83F D97F C102Y D137S T201R",6
"lib1","SARS-CoV-2","ATACCATTAAACCACT",2,41.8,9.16,-1.61,0.09,2.13,1.12,0,">1 nonsynonymous","F12I N109G S147F",3
"lib1","SARS-CoV-2","ATACCATTAGAATCAC",12,105.99,10.3,-0.46,0.05,2.78,1.06,0,">1 nonsynonymous","E141L P149I",2
"lib1","SARS-CoV-2","ATACCATTATTGCGTA",4,62.27,10.26,-0.5,0.06,2.78,1.01,0,">1 nonsynonymous","N1I A22Y F62I",3
"lib1","SARS-CoV-2","ATACCATTCAGGCGAC",2,14.37,6.37,-4.4,0.34,1.5,1.09,0.01,">1 nonsynonymous","P54M L95Q T100L I142S",4
"lib1","SARS-CoV-2","ATACCATTCTGTTCGC",4,5.61,6.11,-4.65,1.24,1.5,1.18,0.03,">1 nonsynonymous","W23M G101A T140C",3
"lib1","SARS-CoV-2","ATACCATTGCCCTCAA",3,1.8,NA,NA,NA,NA,NA,NA,"stop","V32* T170L",2
"lib1","SARS-CoV-2","ATACCATTGTATAATC",1,37.03,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28W Y93K",2
"lib1","SARS-CoV-2","ATACCCAAACGACCAT",3,62.44,10.62,-0.15,0.07,2.89,1.06,0,">1 nonsynonymous","N4T V65L F134M",3
"lib1","SARS-CoV-2","ATACCCAAAGTGTCTA",1,31.74,6.27,-4.49,0.86,1.5,1.21,0.03,">1 nonsynonymous","S29I K48S Y91G",3
"lib1","SARS-CoV-2","ATACCCAATATGCTTC",3,112.67,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105L L125K T140E",3
"lib1","SARS-CoV-2","ATACCCAATCCAACAA",2,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S I104S G116K G117C R136V",5
"lib1","SARS-CoV-2","ATACCCACTCATACTT",2,13.99,6.86,-3.9,0.46,1.5,1.23,0.04,"1 nonsynonymous","V181Y",1
"lib1","SARS-CoV-2","ATACCCACTGAACACG",3,7.95,9.22,-1.54,0.18,2.67,1.09,0.02,">1 nonsynonymous","S36L I104M I138E P169Y",4
"lib1","SARS-CoV-2","ATACCCAGTTAATAGT",6,0.63,NA,NA,NA,NA,NA,NA,"stop","E10C F99R S184*",3
"lib1","SARS-CoV-2","ATACCCATAACATCTG",2,21.75,9.63,-1.13,0.14,1.95,1.04,0.01,">1 nonsynonymous","Y35Q P96A",2
"lib1","SARS-CoV-2","ATACCCATCCTCTCAA",10,18.76,10.04,-0.73,0.13,2.45,1.03,0.01,"1 nonsynonymous","Y178R",1
"lib1","SARS-CoV-2","ATACCCATGAATTTCT",3,80.41,9.46,-1.31,0.11,1.56,1.12,0,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","ATACCCATTCCACAAA",7,58.93,10.3,-0.46,0.09,2.73,1.02,0,">1 nonsynonymous","T15L D90H P197L",3
"lib1","SARS-CoV-2","ATACCCCACCTAAATT",1,64.34,10.17,-0.6,0.06,2.79,1.04,0,">1 nonsynonymous","S45V T201V",2
"lib1","SARS-CoV-2","ATACCCCACTGACACA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","R27* Y39* A81K D97F S147P",5
"lib1","SARS-CoV-2","ATACCCCACTTTGATG",2,29.77,7.9,-2.86,0.41,1.5,1,0.07,">1 nonsynonymous","N130E C150S",2
"lib1","SARS-CoV-2","ATACCCCATAAATCGA",2,21.29,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","ATACCCCCCACGAAGG",9,65.08,6.01,-4.75,0.73,1.5,1.15,0.01,">1 nonsynonymous","L38S T55L K94E R124S P133K",5
"lib1","SARS-CoV-2","ATACCCCCGGCCTCAA",5,0.74,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ATACCCCGACTTACCA",1,28.33,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N40H D97V L125K N157F",4
"lib1","SARS-CoV-2","ATACCCCTAACACAAC",3,11.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3I S41A Y50H T55N G86R S139L T148S",7
"lib1","SARS-CoV-2","ATACCCGAATTCAAGT",1,9.14,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","I72R",1
"lib1","SARS-CoV-2","ATACCCGACACATGAT",1,15.34,6.11,-4.65,0.92,1.5,1.21,0.04,">1 nonsynonymous","S41T S139C F167R",3
"lib1","SARS-CoV-2","ATACCCGATATTATAC",2,41.2,10.67,-0.1,0.07,2.82,1.08,0,">1 nonsynonymous","A42W S184N",2
"lib1","SARS-CoV-2","ATACCCGATGCACTCT",4,40.32,9.33,-1.43,0.12,2.09,1.1,0.01,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","ATACCCGATGTTAAAA",1,15.99,9.99,-0.77,0.08,2.71,1.03,0,">1 nonsynonymous","F44R T63V",2
"lib1","SARS-CoV-2","ATACCCGCCATGAAAT",1,44.91,6,-4.76,1.66,1.5,1.14,0.02,">1 nonsynonymous","F8S F47H",2
"lib1","SARS-CoV-2","ATACCCGGACCAATAT",4,17.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F70A Y123S A190T",3
"lib1","SARS-CoV-2","ATACCCGGTGAGGTAG",3,21.89,6.56,-4.2,0.72,3,1.26,0.02,">1 nonsynonymous","I2R F8T Y91R I104E",4
"lib1","SARS-CoV-2","ATACCCGTGCCCGTGC",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35G Y93A Y119S",3
"lib1","SARS-CoV-2","ATACCCTCACGATTCG",1,22.21,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","Y21D G51K G172Y",3
"lib1","SARS-CoV-2","ATACCCTCCGTAAGCC",1,8.54,6,-4.76,1.15,3,1.2,0.01,">1 nonsynonymous","F44L F99P",2
"lib1","SARS-CoV-2","ATACCCTTAAGATAAA",3,130.49,10.81,0.05,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCGAAAAGTTAGC",1,1.09,NA,NA,NA,NA,NA,NA,"stop","L5* V37M A81K Y91T Y143V",5
"lib1","SARS-CoV-2","ATACCGAAACTGAGAA",3,0.77,NA,NA,NA,NA,NA,NA,"stop","L5* D97F Q144L",3
"lib1","SARS-CoV-2","ATACCGAACATCATAA",3,28.24,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39N K114G I138S G146K G174W",5
"lib1","SARS-CoV-2","ATACCGAACCCGAGAC",3,82.17,10.73,-0.04,0.04,2.9,1.07,0,"1 nonsynonymous","Q163S",1
"lib1","SARS-CoV-2","ATACCGAACTTAACAA",9,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S P54C V77D D97N C158A Y165M L183N",7
"lib1","SARS-CoV-2","ATACCGAAGAGTTACA",2,12.63,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V103P G146V N157T G172A",4
"lib1","SARS-CoV-2","ATACCGAATTTACTAC",8,98.14,6,-4.76,1.5,1.5,1.16,0.01,">1 nonsynonymous","N107F P133N F167C",3
"lib1","SARS-CoV-2","ATACCGACAAAAATGT",2,2.88,NA,NA,NA,NA,NA,NA,"stop","C6V A42C S129*",3
"lib1","SARS-CoV-2","ATACCGATATAATATT",2,15.05,10.92,0.16,0.13,2.95,1,0.01,">1 nonsynonymous","Q168A V173R",2
"lib1","SARS-CoV-2","ATACCGATGCATACTG",2,0.26,NA,NA,NA,NA,NA,NA,"stop","K48R K94D L122V Y178* F185L",5
"lib1","SARS-CoV-2","ATACCGATGCTATAAT",2,75.75,10.67,-0.09,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCGCAAACGTACG",11,57.69,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N13S S19M G74F P161I",4
"lib1","SARS-CoV-2","ATACCGCATCTTACCT",7,177.47,10.77,0.01,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCGCCAAACTCTG",6,76.86,9.3,-1.47,0.08,2.81,1.11,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","ATACCGCCCCAGCCAA",3,6.59,8.3,-2.47,0.21,1.94,1.12,0.01,">1 nonsynonymous","F44T T63S T170R S184F",4
"lib1","SARS-CoV-2","ATACCGCCCCCAGGAA",3,7.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6Y P96T",2
"lib1","SARS-CoV-2","ATACCGCCGTCGACAT",3,101.61,10.52,-0.25,0.04,2.89,1.04,0,">1 nonsynonymous","V32E E141G",2
"lib1","SARS-CoV-2","ATACCGCGAGTATGTG",5,57.59,6.04,-4.73,0.58,1.5,1.13,0.01,">1 nonsynonymous","S36A F44Y V77K Q84M S139W F156Y",6
"lib1","SARS-CoV-2","ATACCGCGCGATGGAT",8,2.4,NA,NA,NA,NA,NA,NA,"stop","F44I E141L C158I E186*",4
"lib1","SARS-CoV-2","ATACCGCGCTTACTCA",2,7.3,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22V I88V D98I G155C",4
"lib1","SARS-CoV-2","ATACCGCGGTATAGAA",15,2.29,NA,NA,NA,NA,NA,NA,"stop","Y35T A81S G101L G152*",4
"lib1","SARS-CoV-2","ATACCGCGTGGTGATT",5,68.1,6.11,-4.66,0.96,1.5,1.22,0.02,">1 nonsynonymous","S36L I72A N130H F185S",4
"lib1","SARS-CoV-2","ATACCGCTAGGCTCAT",1,38.97,10.28,-0.48,0.05,2.94,1.03,0,">1 nonsynonymous","G9N E135V S184V",3
"lib1","SARS-CoV-2","ATACCGGAAAATTAAA",3,16.53,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2S A81D F99V T170R",4
"lib1","SARS-CoV-2","ATACCGGAAGGTCTGG",6,90.92,10.29,-0.48,0.05,2.9,1,0,"1 nonsynonymous","L183V",1
"lib1","SARS-CoV-2","ATACCGGACCTAATTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P96I A105T G166S",4
"lib1","SARS-CoV-2","ATACCGGCTTCTAGAA",14,94.24,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5M S19T G116N T170L",4
"lib1","SARS-CoV-2","ATACCGGTAACATACA",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Q S41N G86D P96K Y121L",5
"lib1","SARS-CoV-2","ATACCGGTAAGTTTAA",4,49.86,10.89,0.12,0.09,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATACCGGTATATATGC",3,1.31,NA,NA,NA,NA,NA,NA,"stop","N13Y D59A I104T E135*",4
"lib1","SARS-CoV-2","ATACCGGTCAGTCCAG",5,247.54,8.75,-2.02,0.07,2,1.12,0,">1 nonsynonymous","L38P K87L Y178W",3
"lib1","SARS-CoV-2","ATACCGGTGAAACATG",1,9.95,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15N F134A Q144R",3
"lib1","SARS-CoV-2","ATACCGGTGACTAGAG",9,3.79,NA,NA,NA,NA,NA,NA,"stop","E10I Y50T G101D D112* R136G",5
"lib1","SARS-CoV-2","ATACCGTACCCTTTCT",3,37.47,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T15Q N64R A81H N107I Y159R Q176R",6
"lib1","SARS-CoV-2","ATACCGTAGCACTTTA",4,0.52,NA,NA,NA,NA,NA,NA,"stop","T3V P82Y N130L S184*",4
"lib1","SARS-CoV-2","ATACCGTATAACACTT",2,8.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G F62S D90Y S113G Y119R I142D",6
"lib1","SARS-CoV-2","ATACCGTCTCATTTAG",1,9.8,11.04,0.28,0.18,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATACCGTTCAAGTTAT",7,69.17,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4I R124S G172A",3
"lib1","SARS-CoV-2","ATACCTAAAAAACTCA",7,75.86,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S41G K94S V103E K114M R124L",5
"lib1","SARS-CoV-2","ATACCTAAAAGCCAAT",5,131.76,9.95,-0.81,0.06,2.53,1.06,0,">1 nonsynonymous","E10R E135S",2
"lib1","SARS-CoV-2","ATACCTAATTAGATCA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4* C61M T201R",3
"lib1","SARS-CoV-2","ATACCTACATGAATAG",2,6.11,10.88,0.12,0.12,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCTACTATGCCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6V V37P S69K D90M Y119* F156M K198*",7
"lib1","SARS-CoV-2","ATACCTAGCTAGGAGT",5,63.78,9.91,-0.85,0.14,2.22,1.01,0.01,">1 nonsynonymous","F99I T201M",2
"lib1","SARS-CoV-2","ATACCTATAAATACTA",8,85.65,10.69,-0.07,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACCTATGAAAAAAA",7,7.58,NA,NA,NA,NA,NA,NA,"stop","A33C K56V N64V P82L P96Y N110* Y159R Q176N",8
"lib1","SARS-CoV-2","ATACCTATTGTAAGTG",1,39.37,9.39,-1.37,0.16,1.76,1.18,0.01,">1 nonsynonymous","N1M D59L V71T",3
"lib1","SARS-CoV-2","ATACCTCCATAACCCC",4,29.49,9.84,-0.93,0.23,1.76,1.04,0.02,"1 nonsynonymous","S108R",1
"lib1","SARS-CoV-2","ATACCTCTAAAGCGTT",5,54.81,10.62,-0.14,0.08,2.89,1.09,0,">1 nonsynonymous","T3K L122C",2
"lib1","SARS-CoV-2","ATACCTCTTTGACTGC",1,5.57,10.32,-0.44,0.18,1.99,1.01,0.01,">1 nonsynonymous","E10Q S53Y D98V",3
"lib1","SARS-CoV-2","ATACCTGAACCGTTAA",1,11.52,6.42,-4.34,0.51,1.5,1.1,0.03,">1 nonsynonymous","K48A D90L L111W K114N G155E",5
"lib1","SARS-CoV-2","ATACCTGACAACACAT",1,61.85,10.63,-0.13,0.06,2.91,1.07,0,">1 nonsynonymous","G9W K132M",2
"lib1","SARS-CoV-2","ATACCTGACACCTAAT",7,65.86,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N64Y L95C Y165S",3
"lib1","SARS-CoV-2","ATACCTGACCATGTAC",3,9.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S45L T63N F99P K132L",4
"lib1","SARS-CoV-2","ATACCTGATTAAATTA",1,4.49,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ATACCTGATTGTGGGG",2,31.45,10.59,-0.18,0.06,2.97,1.05,0,">1 nonsynonymous","T3D K128P",2
"lib1","SARS-CoV-2","ATACCTGCCGCGAAGC",12,215.68,7.21,-3.56,0.13,1.5,1.13,0,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","ATACCTGGCAATATCA",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R T55N",2
"lib1","SARS-CoV-2","ATACCTGGCACACTTT",3,81.58,10.67,-0.09,0.08,2.94,1.01,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","ATACCTGTGCGGGATG",1,31.41,10.79,0.03,0.06,2.95,1.02,0,">1 nonsynonymous","D90M V173L",2
"lib1","SARS-CoV-2","ATACCTTAAGAGACTA",3,8.67,7.15,-3.61,0.42,1.5,1,0.04,">1 nonsynonymous","K26P P54Y C158W",3
"lib1","SARS-CoV-2","ATACCTTACTAATCAT",2,8.86,7.05,-3.71,0.65,3,1.01,0.01,">1 nonsynonymous","A33P Y91V R127I N151D Q168C",5
"lib1","SARS-CoV-2","ATACCTTAGTACTGGC",3,8.26,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A18E R27N C49L D98M",4
"lib1","SARS-CoV-2","ATACCTTATGATTAAT",9,23.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10T T85I L95P G117I",4
"lib1","SARS-CoV-2","ATACCTTCCTGTAAAG",5,56.27,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L5K S29R E76K G86R G117K",5
"lib1","SARS-CoV-2","ATACCTTCGATAAAAT",4,90.33,8.06,-2.7,0.21,1.88,1.1,0.02,">1 nonsynonymous","C6D N118Q G155R",3
"lib1","SARS-CoV-2","ATACCTTGGGAAACCG",11,83.3,6.04,-4.73,0.88,1.5,1.21,0.02,">1 nonsynonymous","K94L Y119R S129L",3
"lib1","SARS-CoV-2","ATACCTTTAACTACCT",10,5.61,NA,NA,NA,NA,NA,NA,"stop","L5T N64S A105Y N120K P133* P169D",6
"lib1","SARS-CoV-2","ATACCTTTAACTTAAC",9,100.93,10.71,-0.05,0.06,2.87,1.07,0,"1 nonsynonymous","L111A",1
"lib1","SARS-CoV-2","ATACCTTTAAGCGAAG",2,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","ATACCTTTACGCACGA",3,41.98,10.81,0.05,0.1,2.88,1.03,0,"1 nonsynonymous","V37W",1
"lib1","SARS-CoV-2","ATACCTTTGCCACCAG",10,161.47,6.2,-4.57,0.79,1.5,1.23,0.02,">1 nonsynonymous","S36N L122P P149I",3
"lib1","SARS-CoV-2","ATACCTTTGCTGTACG",4,19.99,10.12,-0.65,0.18,2.13,1,0.01,"1 nonsynonymous","I88T",1
"lib1","SARS-CoV-2","ATACGAAAAAAACATA",3,52.84,10.76,-0.01,0.04,2.93,1,0,">1 nonsynonymous","L5K L60V",2
"lib1","SARS-CoV-2","ATACGAAAAAAACTAA",2,7.73,9.7,-1.06,0.08,2.96,1.03,0,">1 nonsynonymous","N1G Y93F L122S G174E",4
"lib1","SARS-CoV-2","ATACGAAAATAGATAC",4,2.68,NA,NA,NA,NA,NA,NA,"stop","L38* K94A T201A",3
"lib1","SARS-CoV-2","ATACGAAACCGCATAT",1,16.07,9.16,-1.6,0.19,2.72,1.03,0.01,">1 nonsynonymous","K87L K94Y S129G",3
"lib1","SARS-CoV-2","ATACGAAACGTACAGT",1,5.25,8.06,-2.71,0.42,1.5,1,0.08,">1 nonsynonymous","T3H A105Y Q144N G152C",4
"lib1","SARS-CoV-2","ATACGAAACTCTTAAA",3,57.45,6,-4.76,1.43,1.5,1.19,0.02,">1 nonsynonymous","V37T T63V D90Y N107K Y143L",5
"lib1","SARS-CoV-2","ATACGAAAGGGGTGAA",1,7.93,10.7,-0.07,0.05,2.96,1.04,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","ATACGAAATGTGCTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L R73H P96Y N157F",4
"lib1","SARS-CoV-2","ATACGAAATTTCTACT",4,18.32,9.32,-1.45,0.16,1.95,1.14,0.01,">1 nonsynonymous","V65F N92S",2
"lib1","SARS-CoV-2","ATACGAACAAATGAAG",7,82.09,6,-4.76,2,3,1.21,0,">1 nonsynonymous","S19I V52K Y91F S139N F156G",5
"lib1","SARS-CoV-2","ATACGAACCCAATGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","N1* F8P N13T I88C N151F K199E",6
"lib1","SARS-CoV-2","ATACGAACGAAAATTT",10,97.67,10.29,-0.48,0.05,2.83,1.06,0,">1 nonsynonymous","T15V L38Y L125M",3
"lib1","SARS-CoV-2","ATACGAAGGTAACGTT",6,50.59,10.61,-0.16,0.07,2.9,1.05,0,">1 nonsynonymous","N1K N120I",2
"lib1","SARS-CoV-2","ATACGAATACCGAGGG",4,3.08,NA,NA,NA,NA,NA,NA,"stop","N118I R124* Q168K",3
"lib1","SARS-CoV-2","ATACGAATACTTAATA",4,29.11,8.02,-2.74,0.17,1.67,1.17,0.01,">1 nonsynonymous","S45V R73K Y119L",3
"lib1","SARS-CoV-2","ATACGAATATGTCCGG",4,24.01,8.7,-2.07,0.37,1.5,1,0.05,">1 nonsynonymous","L5D V52M P96H V180G K199Q",5
"lib1","SARS-CoV-2","ATACGAATCTCATAAT",2,40.82,10.76,-0.01,0.07,2.85,1,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","ATACGAATTCTAAAAC",2,15.54,10.06,-0.71,0.16,2.36,1.19,0.01,">1 nonsynonymous","N4P F12V G83R K114S T201N",5
"lib1","SARS-CoV-2","ATACGACAAACCGTAA",4,27.9,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D112F Y143L T201R",3
"lib1","SARS-CoV-2","ATACGACACACTTGAC",3,49.13,10.24,-0.52,0.14,2.32,1.02,0.01,">1 nonsynonymous","Y93F N120A",2
"lib1","SARS-CoV-2","ATACGACATGATTCTT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T P96L",2
"lib1","SARS-CoV-2","ATACGACCAGATTTAG",5,55,10.79,0.02,0.06,2.93,1.04,0,">1 nonsynonymous","S29G K199H",2
"lib1","SARS-CoV-2","ATACGACCGCAAACAA",2,10.83,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","L183S",1
"lib1","SARS-CoV-2","ATACGACGATGTCACA",6,73.14,10.74,-0.03,0.06,2.92,1.04,0,">1 nonsynonymous","Y39L L60N",2
"lib1","SARS-CoV-2","ATACGACGTTAATTCC",2,82.39,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y93Q I142L",2
"lib1","SARS-CoV-2","ATACGACTAGTCTACA",4,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A14H A33S T100P D112G N118I C158S",7
"lib1","SARS-CoV-2","ATACGACTATTAGCGT",2,11.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6P T15R K56Q D98I V103I",5
"lib1","SARS-CoV-2","ATACGACTCAAACTAG",1,68.94,10.15,-0.61,0.13,2.52,1.09,0.01,">1 nonsynonymous","D90Y V115R",2
"lib1","SARS-CoV-2","ATACGAGATGCCTACA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","C49R K94* G116Y C150K V180W",5
"lib1","SARS-CoV-2","ATACGAGCATAAGGAT",1,31.38,10.22,-0.54,0.17,2.68,1.09,0.01,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","ATACGAGCCTAGGAAA",2,60.91,10.8,0.03,0.04,2.87,1.05,0,">1 nonsynonymous","Y35M T63K P149K",3
"lib1","SARS-CoV-2","ATACGAGTGCCTGTAT",1,11.18,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","Y35S N92H G116D",3
"lib1","SARS-CoV-2","ATACGAGTGTCAATTT",5,27.77,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","A14V C49T G86N",3
"lib1","SARS-CoV-2","ATACGAGTGTCCAAAG",7,58.01,6.22,-4.54,0.81,1.5,1.24,0.02,">1 nonsynonymous","C6W A22R A33C S45F A105N Q176S",6
"lib1","SARS-CoV-2","ATACGATAATAGCGGA",2,40.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R P133S",2
"lib1","SARS-CoV-2","ATACGATAGTCATATA",9,201.72,10.64,-0.12,0.04,2.91,1.03,0,">1 nonsynonymous","D90L K128H",2
"lib1","SARS-CoV-2","ATACGATCCAGTAGCA",4,49.23,6.1,-4.66,1.14,1.5,1.19,0.03,">1 nonsynonymous","I28P F44S",2
"lib1","SARS-CoV-2","ATACGATGCTTTAACG",3,20.01,6.52,-4.25,0.61,1.5,1.26,0.03,">1 nonsynonymous","L5S N13C A89G",3
"lib1","SARS-CoV-2","ATACGATTAATAGAGA",2,32.34,10.76,0,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGCAACATTCACA",3,68.75,10.26,-0.51,0.27,1.5,1.05,0.03,">1 nonsynonymous","D34G D68E D137R",3
"lib1","SARS-CoV-2","ATACGCAAGTATGCAG",1,2.09,NA,NA,NA,NA,NA,NA,"stop","N107* Q168G Y175L",3
"lib1","SARS-CoV-2","ATACGCAATATAGGGT",2,79.85,10.66,-0.11,0.02,2.86,1.08,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","ATACGCAATCAACTGG",7,2.13,NA,NA,NA,NA,NA,NA,"stop","Y21* Y91R L122* I138* F156L",5
"lib1","SARS-CoV-2","ATACGCACAACGAGTA",9,4.49,NA,NA,NA,NA,NA,NA,"stop","S53L G86R Y93S V115* Y178* R179V",6
"lib1","SARS-CoV-2","ATACGCACAGGCACTG",1,60.87,10.26,-0.5,0.07,2.57,1.03,0,">1 nonsynonymous","N13H C61G",2
"lib1","SARS-CoV-2","ATACGCACCTAAACCG",2,14.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5S Y35C T55H A81K T85M Y119S",6
"lib1","SARS-CoV-2","ATACGCAGGACCCCAT",3,16.4,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A42Q L60P D90H S164I V181K",5
"lib1","SARS-CoV-2","ATACGCATACTAAGGT",13,125.83,10.6,-0.17,0.05,2.89,1.06,0,">1 nonsynonymous","T55L S184R",2
"lib1","SARS-CoV-2","ATACGCATGCCATAAT",6,139.86,10.69,-0.07,0.08,2.9,1.09,0,">1 nonsynonymous","V37L S43F",2
"lib1","SARS-CoV-2","ATACGCCAAAAAACAT",2,5.74,6.14,-4.62,0.42,2.33,1.05,0.01,">1 nonsynonymous","C6Y A14S G51E D59P P149L Q168S S200L",7
"lib1","SARS-CoV-2","ATACGCCAATTTTAAA",3,1.57,NA,NA,NA,NA,NA,NA,"stop","F62V K87R G146I C158*",4
"lib1","SARS-CoV-2","ATACGCCACAAAAATT",5,56.94,9.95,-0.82,0.08,2.14,1.01,0,">1 nonsynonymous","L95M E135K",2
"lib1","SARS-CoV-2","ATACGCCACAAATACA",1,30.64,10.83,0.07,0.07,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGCCATTGTCTTA",3,51.13,10.41,-0.35,0.06,2.96,1.03,0,">1 nonsynonymous","Y39V F156V",2
"lib1","SARS-CoV-2","ATACGCCGAAACCCGG",3,22.51,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","P96V N107G Y178K",3
"lib1","SARS-CoV-2","ATACGCCGAAGACGGC",4,14.57,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C49D Y119S",2
"lib1","SARS-CoV-2","ATACGCCTAGATAAGG",2,12.75,9.94,-0.82,0.12,2.94,1.01,0.01,">1 nonsynonymous","A14D A33P",2
"lib1","SARS-CoV-2","ATACGCCTATAGACTG",4,3.39,NA,NA,NA,NA,NA,NA,"stop","A33* Q84S",2
"lib1","SARS-CoV-2","ATACGCGCACTGCCAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","R25S C102* Q163L",3
"lib1","SARS-CoV-2","ATACGCGCAGGAGGAA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D P82K A105Y",3
"lib1","SARS-CoV-2","ATACGCGGAGTATTAA",2,49.13,9.25,-1.52,0.14,2.17,1.14,0.01,">1 nonsynonymous","A14C N107A",2
"lib1","SARS-CoV-2","ATACGCGGGACGCGAT",5,42.65,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D34V C49P F134Y G146Q",4
"lib1","SARS-CoV-2","ATACGCTACTATCGAG",3,41.58,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G86Y V115R L125S Y159A",4
"lib1","SARS-CoV-2","ATACGCTCCGACGACA",6,75.46,10.59,-0.17,0.03,2.88,1.05,0,">1 nonsynonymous","L5V C61S F160P",3
"lib1","SARS-CoV-2","ATACGCTTAAACATAA",1,70.32,6.12,-4.65,0.93,1.5,1.21,0.02,">1 nonsynonymous","C31M R73T P82A G86E I142W",5
"lib1","SARS-CoV-2","ATACGCTTATAGCACA",2,9.59,10.28,-0.48,0.19,2.6,1.11,0.01,">1 nonsynonymous","D59K R73S",2
"lib1","SARS-CoV-2","ATACGCTTCGGGCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* F44Y Q84L K94L D97H D112S V173S",7
"lib1","SARS-CoV-2","ATACGCTTGCCATACA",1,6.11,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","T85P P161I",2
"lib1","SARS-CoV-2","ATACGGAAAAAATATA",5,72.95,10.2,-0.56,0.05,2.78,1.09,0,">1 nonsynonymous","A18G N64M G174S",3
"lib1","SARS-CoV-2","ATACGGAAAAAATCGA",1,89.4,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I72L F126S G146E",3
"lib1","SARS-CoV-2","ATACGGAAAAATCAAG",1,9.68,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I88R G101P G166I",3
"lib1","SARS-CoV-2","ATACGGAAAGAATTAG",7,4.15,NA,NA,NA,NA,NA,NA,"stop","S53A P96T S113* N120T",4
"lib1","SARS-CoV-2","ATACGGAACACAAAAT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K K87G K94F K198S",4
"lib1","SARS-CoV-2","ATACGGAATAACCCCG",5,21.61,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14L L95Y V115L",3
"lib1","SARS-CoV-2","ATACGGACCAACTTGA",3,33.83,10.18,-0.58,0.11,2.83,1,0.01,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","ATACGGAGCTGACAGG",3,32.58,7.95,-2.82,0.35,1.5,1.08,0.04,">1 nonsynonymous","R27M G117W S129L H189R T201P",5
"lib1","SARS-CoV-2","ATACGGATAATGTTTG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L A192E",2
"lib1","SARS-CoV-2","ATACGGATGAAAAGAA",6,1.35,NA,NA,NA,NA,NA,NA,"stop","N4V N40T V65E K198*",4
"lib1","SARS-CoV-2","ATACGGATGCAAACAG",2,18.3,10.5,-0.27,0.08,3,1,0,">1 nonsynonymous","S53C N64I",2
"lib1","SARS-CoV-2","ATACGGCAGCTCGTGA",2,26.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62C D68G P96E G155S",4
"lib1","SARS-CoV-2","ATACGGCAGGATTCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T46* K56Y P82A V103D P149I P197V",6
"lib1","SARS-CoV-2","ATACGGCATAAAAAAA",1,5.98,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","R27M K128L P133I A145Y",4
"lib1","SARS-CoV-2","ATACGGCCCCCGGTTA",9,148.88,10.46,-0.3,0.05,2.9,1.03,0,">1 nonsynonymous","Y39P S129G I142L",3
"lib1","SARS-CoV-2","ATACGGCGAAAATCAT",5,0,NA,NA,NA,NA,NA,NA,"stop","F44N I104S L125* Y159K",4
"lib1","SARS-CoV-2","ATACGGCGTTCACCGG",3,83.09,10.72,-0.05,0.06,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGGGCAGCTGGAT",2,11,NA,NA,NA,NA,NA,NA,"stop","N24K A89N L122*",3
"lib1","SARS-CoV-2","ATACGGGCCTCATGAA",4,40.94,10.76,0,0.05,2.95,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATACGGGGACCTCCCG",4,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17M S129N D137N",3
"lib1","SARS-CoV-2","ATACGGGGGGCGTATA",2,45.47,10.8,0.04,0.08,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGGGTATACTAGA",6,0.57,NA,NA,NA,NA,NA,NA,"stop","S69* N107L T140G Y165G S184H",5
"lib1","SARS-CoV-2","ATACGGGTCACTATTA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","W23S S45*",2
"lib1","SARS-CoV-2","ATACGGTAAATTAGAT",4,15.04,9.85,-0.92,0.16,2.64,1.09,0.01,">1 nonsynonymous","G83C G155I",2
"lib1","SARS-CoV-2","ATACGGTAGACCAATT",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I Q84H P197S",3
"lib1","SARS-CoV-2","ATACGGTAGGTTAGCT",4,17.48,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","ATACGGTATACACCTT",6,68.36,9.28,-1.49,0.12,1.86,1.12,0.01,"1 nonsynonymous","R25N",1
"lib1","SARS-CoV-2","ATACGGTCGCAAGCAT",5,7.64,NA,NA,NA,NA,NA,NA,"stop","F44D L60I T85* Y143H",4
"lib1","SARS-CoV-2","ATACGGTTACATACAT",3,47.11,8,-2.76,0.22,1.72,1.18,0.02,">1 nonsynonymous","A14L D97E N157S",3
"lib1","SARS-CoV-2","ATACGGTTCGTAACAC",3,30.27,10.28,-0.48,0.08,3,1,0,">1 nonsynonymous","D34K C61L",2
"lib1","SARS-CoV-2","ATACGGTTCTAGGTTT",2,26.53,6.31,-4.46,0.64,1.5,1.35,0.04,">1 nonsynonymous","V11H N58Y A89S",3
"lib1","SARS-CoV-2","ATACGTAAAAAATTCA",2,199.67,9.26,-1.51,0.09,2.63,1.14,0,">1 nonsynonymous","Y119R N151T S184H L187P",4
"lib1","SARS-CoV-2","ATACGTAATGAATTGC",1,20.81,10.19,-0.57,0.07,2.83,1.03,0,">1 nonsynonymous","T15L K56M L57M",3
"lib1","SARS-CoV-2","ATACGTACAGTAATAA",6,59.08,10.06,-0.71,0.1,2.38,1,0,">1 nonsynonymous","N4W G83L K132A K198D",4
"lib1","SARS-CoV-2","ATACGTAGTTAGTAAT",3,19.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14L V65E",2
"lib1","SARS-CoV-2","ATACGTATACTCCGTT",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H Y119G E154D S200Y",4
"lib1","SARS-CoV-2","ATACGTATTTCAAGAA",2,26.82,9.63,-1.13,0.25,1.5,1,0.06,">1 nonsynonymous","C49L K56Y V115L",3
"lib1","SARS-CoV-2","ATACGTCAAGCAAGGT",9,128.5,10.71,-0.05,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGTCATACATCAA",5,29.36,6.91,-3.86,0.5,1.5,1.1,0.04,">1 nonsynonymous","Y21L A33S Y119W F156K",4
"lib1","SARS-CoV-2","ATACGTCCAGACATGA",1,39.99,10.8,0.03,0.05,2.97,1.01,0,">1 nonsynonymous","K56R Q84T",2
"lib1","SARS-CoV-2","ATACGTGCCATTCCGT",2,32.1,9.47,-1.3,0.33,1.62,1.15,0.05,">1 nonsynonymous","D34G T55S P133E",3
"lib1","SARS-CoV-2","ATACGTGTTTTTCAAA",1,11.39,10.15,-0.61,0.14,2.89,1.08,0,">1 nonsynonymous","P149R L162V",2
"lib1","SARS-CoV-2","ATACGTTAAAAAACAA",4,46.85,10.63,-0.13,0.08,2.88,1.04,0,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","ATACGTTACCTTTCAC",1,60.2,10.61,-0.15,0.06,2.88,1.03,0,">1 nonsynonymous","K132A P149V V173A",3
"lib1","SARS-CoV-2","ATACGTTAGAGGGCAT",4,72.51,10.73,-0.03,0.09,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACGTTATAATCAAA",1,19.24,9.89,-0.88,0.14,2.24,1.01,0.01,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","ATACGTTATACACCAG",2,44.37,7.52,-3.24,0.27,1.5,1.16,0.02,">1 nonsynonymous","A33V P133L F167D",3
"lib1","SARS-CoV-2","ATACGTTATGTAACCT",2,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y Y91H Y123W F134L E154D",5
"lib1","SARS-CoV-2","ATACGTTCTACATTAA",8,64.96,9.96,-0.8,0.04,2.05,1.01,0,">1 nonsynonymous","F44L Y91K",2
"lib1","SARS-CoV-2","ATACGTTTTCCACCAC",8,3.86,NA,NA,NA,NA,NA,NA,"stop","L5* V52S A145T L187M",4
"lib1","SARS-CoV-2","ATACTAAAAAGATTAT",2,40.25,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10N R16I F70K D90I I142A P149E S184K",7
"lib1","SARS-CoV-2","ATACTAAAAGGCCGTA",2,2.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","ATACTAAAATAAAGTG",1,8.19,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G74T P133H",2
"lib1","SARS-CoV-2","ATACTAAACACACCTA",2,3.32,NA,NA,NA,NA,NA,NA,"stop","T3R T170*",2
"lib1","SARS-CoV-2","ATACTAAACATAGAAA",2,44.23,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6H A67C P133Q",3
"lib1","SARS-CoV-2","ATACTAAACTAAATTA",1,54.85,8.98,-1.78,0.1,2.5,1.12,0,">1 nonsynonymous","C61V Q176L",2
"lib1","SARS-CoV-2","ATACTAAAGCGCTTTT",2,29.16,8.06,-2.7,0.33,1.5,1.1,0.05,">1 nonsynonymous","A22V T63Y K128I E141L",4
"lib1","SARS-CoV-2","ATACTAAAGCTGGAGC",4,2.41,NA,NA,NA,NA,NA,NA,"stop","D59I A105D S113* T201E",4
"lib1","SARS-CoV-2","ATACTAAAGGAAAAGT",2,34.25,10.05,-0.71,0.12,2.45,1.09,0,">1 nonsynonymous","F62L Y165F",2
"lib1","SARS-CoV-2","ATACTAAAGTAAATCA",8,194.81,10.56,-0.21,0.04,2.9,1.02,0,">1 nonsynonymous","S184L K198V",2
"lib1","SARS-CoV-2","ATACTAAATATTCCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib1","SARS-CoV-2","ATACTAAATGGCATGG",4,1.85,NA,NA,NA,NA,NA,NA,"stop","L57M G83P P96* A105L L122*",5
"lib1","SARS-CoV-2","ATACTAACAACATGTA",5,0.82,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","ATACTAACAAGCCTAA",1,7.4,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F44C I88M G146K",3
"lib1","SARS-CoV-2","ATACTAACATTGTCCC",8,0.34,NA,NA,NA,NA,NA,NA,"stop","N1E D90V T100R D112* P161F",5
"lib1","SARS-CoV-2","ATACTAACCAATTGTA",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102I G117Q",2
"lib1","SARS-CoV-2","ATACTAACCCGTTGCG",3,12.55,6.32,-4.45,0.88,1.5,1.17,0.04,">1 nonsynonymous","G86T W106F",2
"lib1","SARS-CoV-2","ATACTAACGTACACTA",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101I E141G G172W G196W",4
"lib1","SARS-CoV-2","ATACTAACGTTTACCT",6,128.47,6.05,-4.71,0.58,1.5,1.13,0.01,">1 nonsynonymous","E154G C158L",2
"lib1","SARS-CoV-2","ATACTAACTACCATGG",5,61.41,9.93,-0.83,0.11,2.04,1.01,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","ATACTAAGAGTAAATA",18,71.52,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S19L G74V D112L L122P K132T G155C Y165L",7
"lib1","SARS-CoV-2","ATACTAAGCAAAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5K N58I G86K F99I E141L P149*",6
"lib1","SARS-CoV-2","ATACTAAGTGATTAGT",7,187.65,10.72,-0.05,0.05,2.93,1.04,0,"1 nonsynonymous","V115A",1
"lib1","SARS-CoV-2","ATACTAATAAAAAAGG",2,40.35,9.1,-1.66,0.15,1.5,1.03,0.01,"1 nonsynonymous","E76R",1
"lib1","SARS-CoV-2","ATACTAATACATAAAC",2,80.24,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3V K48C A81S Y123Q Q176R",5
"lib1","SARS-CoV-2","ATACTAATAGCATCTA",8,114.65,8.53,-2.24,0.07,2.43,1.11,0,">1 nonsynonymous","S29F Q84Y T170N",3
"lib1","SARS-CoV-2","ATACTAATCGAGGTAT",2,22.77,6,-4.76,1.75,3,1.17,0,">1 nonsynonymous","I2L R25A K114M Y121P E135M G172K",6
"lib1","SARS-CoV-2","ATACTAATGAACTGAT",3,17.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25H S69N V77N G155M",4
"lib1","SARS-CoV-2","ATACTAATGGATGATA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","T55Y N92* I104L C150F",4
"lib1","SARS-CoV-2","ATACTACAAATTTGAC",3,48.7,10.35,-0.42,0.04,2.84,1.03,0,">1 nonsynonymous","L60T S184K",2
"lib1","SARS-CoV-2","ATACTACAAATTTGCA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y91* K114R P133F",3
"lib1","SARS-CoV-2","ATACTACAGATGGGAA",1,0.95,NA,NA,NA,NA,NA,NA,"stop","A33G Y50C N92P Y123V E141*",5
"lib1","SARS-CoV-2","ATACTACATGATCTCA",2,126.96,6.63,-4.13,0.32,1.5,1.15,0.01,">1 nonsynonymous","S41K C158E",2
"lib1","SARS-CoV-2","ATACTACCAACGAGTG",5,72.37,10.45,-0.31,0.04,2.97,1.01,0,">1 nonsynonymous","F156S Q163L",2
"lib1","SARS-CoV-2","ATACTACCTGATCAAT",5,43.46,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K56E T85M I104M N107R S113W F167P",6
"lib1","SARS-CoV-2","ATACTACCTTAATATA",2,39.06,7.8,-2.96,0.4,1.5,1,0.07,">1 nonsynonymous","S45R A89R L95M",3
"lib1","SARS-CoV-2","ATACTACGATAATACG",4,14.36,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","Q84P S139L P149Y",3
"lib1","SARS-CoV-2","ATACTACGCCCACTAG",10,118.23,10.28,-0.49,0.05,2.86,1.03,0,">1 nonsynonymous","N24K S45P I138S",3
"lib1","SARS-CoV-2","ATACTACGCTAAGACG",2,20.33,10.23,-0.54,0.09,2.85,1.05,0.01,">1 nonsynonymous","V65I Y91K",2
"lib1","SARS-CoV-2","ATACTACGGGTACGTA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122I S139Y",2
"lib1","SARS-CoV-2","ATACTACTACTATCCT",1,40.03,10.17,-0.59,0.15,2.68,1,0.02,">1 nonsynonymous","T3F F44L",2
"lib1","SARS-CoV-2","ATACTACTCGAAAAAT",6,77.89,8.02,-2.74,0.24,1.5,1.04,0.02,">1 nonsynonymous","S19W G166A",2
"lib1","SARS-CoV-2","ATACTACTTTAAGAGT",4,54.24,10.7,-0.06,0.05,2.84,1.13,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","ATACTAGCCCCAAATT",1,53.34,10.5,-0.27,0.09,2.86,1.06,0,">1 nonsynonymous","K48M I138L",2
"lib1","SARS-CoV-2","ATACTAGCCGTGGAAG",5,16.85,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I2N L38P Y121F R127L I142S Y175N",6
"lib1","SARS-CoV-2","ATACTAGCTGCAAACA",1,17.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N151A L183Y",2
"lib1","SARS-CoV-2","ATACTAGGACTCGACG",4,16.6,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","E10Y F62I V77F K87P P149H L183T",6
"lib1","SARS-CoV-2","ATACTAGGATGACAAC",5,59.69,10.73,-0.04,0.09,2.88,1.08,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","ATACTAGTGAAAATTA",7,13.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N1A F99T K132M S139L",4
"lib1","SARS-CoV-2","ATACTATAACAAATTT",3,36.17,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I2C D90S R127E G166P",4
"lib1","SARS-CoV-2","ATACTATAATATTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N58V D97G K132* Q144M",4
"lib1","SARS-CoV-2","ATACTATACAAAAAAA",6,102.12,9.78,-0.98,0.12,2.11,1.02,0.01,">1 nonsynonymous","S129L S139Y",2
"lib1","SARS-CoV-2","ATACTATGAAAATACT",1,43.71,8.48,-2.28,0.13,2.5,1.15,0.01,">1 nonsynonymous","R27P R73E Q84M I104F",4
"lib1","SARS-CoV-2","ATACTATGACATCTGC",4,0.47,NA,NA,NA,NA,NA,NA,"stop","V11G V103* G152F",3
"lib1","SARS-CoV-2","ATACTATTAAAAAGTG",3,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E K199I",2
"lib1","SARS-CoV-2","ATACTATTATTATTAT",3,16.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87G D98T F167T",3
"lib1","SARS-CoV-2","ATACTATTCGAATTTT",2,61.76,9.95,-0.82,0.11,2.22,1.05,0,"1 nonsynonymous","F12Y",1
"lib1","SARS-CoV-2","ATACTATTCTAAACGC",2,67.62,10.74,-0.02,0.06,2.91,1.08,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","ATACTCAAAGTAAGAA",2,32.93,10.74,-0.02,0.12,2.92,1.01,0,">1 nonsynonymous","Y35L V37L I138P A190Q T201W",5
"lib1","SARS-CoV-2","ATACTCAAGAAATCTG",8,113.04,10.68,-0.09,0.04,2.95,1.02,0,"1 nonsynonymous","G116R",1
"lib1","SARS-CoV-2","ATACTCAAGCTCATAT",1,46,9,-1.77,0.09,2.43,1.11,0,">1 nonsynonymous","N64W I142Y G174W",3
"lib1","SARS-CoV-2","ATACTCAAGTCCCCTC",2,5.87,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F44N T55E L131K S200G",4
"lib1","SARS-CoV-2","ATACTCAATATGAGAC",5,16.39,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","W106A R136F",2
"lib1","SARS-CoV-2","ATACTCACGTATATTG",3,89.06,9.36,-1.4,0.11,2.52,1.11,0,">1 nonsynonymous","N40L K114G P149L",3
"lib1","SARS-CoV-2","ATACTCAGGCCTGTTA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","D68* K87Q S139I",3
"lib1","SARS-CoV-2","ATACTCAGGTTAAATG",1,10.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89F P149M G155V",3
"lib1","SARS-CoV-2","ATACTCAGTATAATAT",1,8.36,7.83,-2.93,0.45,1.5,1.06,0.06,">1 nonsynonymous","D59W S69C I104F N110K I138Y",5
"lib1","SARS-CoV-2","ATACTCATCTAAGCGC",2,60.29,10.76,0,0.07,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTCATCTTATTTG",4,63.71,10.55,-0.22,0.05,2.81,1.09,0,"1 nonsynonymous","T85W",1
"lib1","SARS-CoV-2","ATACTCATTATAACCT",7,928.53,9.08,-1.68,0.16,1.57,1.11,0.01,">1 nonsynonymous","C49I P149N",2
"lib1","SARS-CoV-2","ATACTCATTCCCCATG",1,28.25,10.01,-0.75,0.1,2.62,1.01,0,">1 nonsynonymous","Q84Y F160L",2
"lib1","SARS-CoV-2","ATACTCATTCGAATAA",3,30.47,7.33,-3.43,0.4,1.5,1.23,0.04,">1 nonsynonymous","R25M K114R",2
"lib1","SARS-CoV-2","ATACTCCAACTCGAGG",1,26.5,8.21,-2.55,0.19,1.91,1.04,0.01,">1 nonsynonymous","L38Q S164D P197Y",3
"lib1","SARS-CoV-2","ATACTCCAGTCATTAA",1,49.62,8.41,-2.35,0.15,1.91,1.1,0.01,">1 nonsynonymous","W106S Y119G",2
"lib1","SARS-CoV-2","ATACTCCCCAGTTTTA",2,6.94,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N1S K87S Y91W G101L F134E",5
"lib1","SARS-CoV-2","ATACTCCCTCACACGT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","A81T V103*",2
"lib1","SARS-CoV-2","ATACTCCCTCTTTTGC",2,0,NA,NA,NA,NA,NA,NA,"stop","S36H A42* G86D N151E",4
"lib1","SARS-CoV-2","ATACTCCGGAGCACAA",4,33.4,6,-4.76,1.53,1.5,1.19,0.01,">1 nonsynonymous","E10Q P82V K87C P96A Y119R",5
"lib1","SARS-CoV-2","ATACTCCTATCGGCTA",2,30.48,10.1,-0.66,0.38,1.5,1,0.05,">1 nonsynonymous","F17L W106K",2
"lib1","SARS-CoV-2","ATACTCCTCAATACAA",4,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M C49M T55S A81N N107A F167L",6
"lib1","SARS-CoV-2","ATACTCCTCCAACTTT",7,73.17,9.94,-0.82,0.1,2,1.1,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","ATACTCCTGACCGCAA",2,8.06,9.23,-1.54,0.5,2.17,1.24,0.08,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","ATACTCGAAAACGAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5M D75* P149N Q176S",4
"lib1","SARS-CoV-2","ATACTCGCTCCTTCCT",6,1.64,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","ATACTCGTAATGCGAG",4,43.78,10.78,0.01,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTCGTCGCGCCGA",2,18.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P82N N107S",2
"lib1","SARS-CoV-2","ATACTCGTGGTTAAAA",2,1.38,NA,NA,NA,NA,NA,NA,"stop","V20E D97* G146R T201W",4
"lib1","SARS-CoV-2","ATACTCGTTTAAGTTT",3,35.32,10.03,-0.73,0.06,2.47,1.01,0,">1 nonsynonymous","A14E F47I G152S",3
"lib1","SARS-CoV-2","ATACTCTAAAAAGCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib1","SARS-CoV-2","ATACTCTAAACGCAAT",2,27.21,10.08,-0.68,0.05,2.9,1,0,">1 nonsynonymous","S53L G146S Q168M",3
"lib1","SARS-CoV-2","ATACTCTAACAAGCAA",3,27.41,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F99S E135W T201P",3
"lib1","SARS-CoV-2","ATACTCTAGAATGCCT",1,27.31,10.27,-0.49,0.07,2.81,1.11,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","ATACTCTAGGAAAAAT",5,99.42,10.56,-0.2,0.04,2.85,1.03,0,">1 nonsynonymous","D97R F160L",2
"lib1","SARS-CoV-2","ATACTCTATACCCAGG",3,78.65,10.58,-0.19,0.04,2.93,1.03,0,">1 nonsynonymous","T55E E76T K87V",3
"lib1","SARS-CoV-2","ATACTCTCCATGTACC",5,54.54,9.17,-1.59,0.24,1.5,1.19,0.02,">1 nonsynonymous","N40Y F99L",2
"lib1","SARS-CoV-2","ATACTCTGGCAGTAGC",4,1.02,NA,NA,NA,NA,NA,NA,"stop","S41* R78D",2
"lib1","SARS-CoV-2","ATACTCTGTCAAATTA",4,46.73,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9P A14G G51T S108L G116D R136K",6
"lib1","SARS-CoV-2","ATACTCTGTGCATAAA",5,53.92,8.24,-2.52,0.16,1.5,1.09,0.01,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","ATACTCTTCACTTACA",4,46.9,10.45,-0.32,0.05,2.9,1.03,0,">1 nonsynonymous","I2S L60S K94R",3
"lib1","SARS-CoV-2","ATACTCTTCTCGTATT",1,17.34,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S43Y A105H S113V E154R",4
"lib1","SARS-CoV-2","ATACTGAAAAGCGATG",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","ATACTGAAAGTACCTA",5,60.58,9.89,-0.88,0.12,2.45,1.1,0.01,">1 nonsynonymous","C31I F44W F62L",3
"lib1","SARS-CoV-2","ATACTGAAGCCCTGTT",1,1.44,NA,NA,NA,NA,NA,NA,"stop","Q84M G116L L183* T201V",4
"lib1","SARS-CoV-2","ATACTGAATGTACAGG",1,50.54,9.23,-1.53,0.13,2.41,1.12,0.01,">1 nonsynonymous","E10I K26T F44N F62L A192E",5
"lib1","SARS-CoV-2","ATACTGAATTAAGAAG",5,3.29,NA,NA,NA,NA,NA,NA,"stop","D59* D68W",2
"lib1","SARS-CoV-2","ATACTGACAAAGCGAA",6,23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A67T D98V S113K T170L",4
"lib1","SARS-CoV-2","ATACTGACACGTATGG",3,18.72,10.04,-0.72,0.16,2.66,1.11,0.01,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","ATACTGACATTCAGAA",2,56.54,9.69,-1.08,0.13,1.96,1.03,0.01,">1 nonsynonymous","F62R Y91M",2
"lib1","SARS-CoV-2","ATACTGACGAACAAGG",14,92,10.77,0.01,0.07,2.92,1.04,0,"1 nonsynonymous","I2Q",1
"lib1","SARS-CoV-2","ATACTGAGAAACAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60M V71K D97K A105S R179D A192M T201*",7
"lib1","SARS-CoV-2","ATACTGAGTAACACAA",1,83.89,8.65,-2.11,0.1,2.2,1.07,0,">1 nonsynonymous","P54G Q176S",2
"lib1","SARS-CoV-2","ATACTGAGTGACCATA",5,45.01,9.05,-1.71,0.06,2.95,1.03,0,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","ATACTGATAAAAATAG",1,19.66,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S36E T46I R73W I88Y",4
"lib1","SARS-CoV-2","ATACTGATCGGTTCTG",1,21.73,9.81,-0.95,0.09,2.21,1.07,0,"1 nonsynonymous","L162Y",1
"lib1","SARS-CoV-2","ATACTGATTCGTAAAA",8,110.03,9.92,-0.85,0.07,2.37,1.04,0,">1 nonsynonymous","P7F N64G E141T K199N",4
"lib1","SARS-CoV-2","ATACTGATTGCCCAAT",13,196.71,9.69,-1.08,0.08,1.84,1.08,0,">1 nonsynonymous","N24V Y91R",2
"lib1","SARS-CoV-2","ATACTGCAAAACCACT",3,21.84,6.79,-3.98,0.39,1.5,1.05,0.03,">1 nonsynonymous","P7S G51I G86W T148F",4
"lib1","SARS-CoV-2","ATACTGCACCACATAT",2,49.82,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V103S S184F",2
"lib1","SARS-CoV-2","ATACTGCAGTGAACAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","ATACTGCCCCAAATCG",3,89.03,10.83,0.07,0.07,2.88,1.07,0,"1 nonsynonymous","S129V",1
"lib1","SARS-CoV-2","ATACTGCCGCCCCGAA",12,111.37,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","C61F P82V Q176H P197R",4
"lib1","SARS-CoV-2","ATACTGCGATACTAAT",2,27.34,10.52,-0.25,0.06,2.89,1.05,0,">1 nonsynonymous","A42L K56L L125M",3
"lib1","SARS-CoV-2","ATACTGCTACAAGGAA",4,54.24,10.76,0,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTGGAAAGACGAG",3,38.96,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N30M G86L E141P",3
"lib1","SARS-CoV-2","ATACTGGAATATGACA",6,117.55,10.72,-0.04,0.04,2.91,1.02,0,">1 nonsynonymous","C61W S164H",2
"lib1","SARS-CoV-2","ATACTGGATGACAATA",6,183.11,8.27,-2.49,0.13,2.87,1.04,0.01,">1 nonsynonymous","V37L S113N L122W P169T",4
"lib1","SARS-CoV-2","ATACTGGCAAAATCCC",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q T15V L38M C61S D68W P82G K87Y",7
"lib1","SARS-CoV-2","ATACTGGGCTCATGGC",1,49.02,10.55,-0.21,0.05,2.92,1.04,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","ATACTGGGGAGAGTAA",2,15.19,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y66K G101V",2
"lib1","SARS-CoV-2","ATACTGGTAAAGCCGT",2,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N L183H",2
"lib1","SARS-CoV-2","ATACTGGTGACTCCTT",7,59.01,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G51P F62Y D97A P133F G152C",5
"lib1","SARS-CoV-2","ATACTGTAACAAGTCA",1,57.69,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","P54Y R78E S147I P177W",4
"lib1","SARS-CoV-2","ATACTGTACCCTAATG",8,1.02,NA,NA,NA,NA,NA,NA,"stop","Y35* S45V W106S G116I",4
"lib1","SARS-CoV-2","ATACTGTACGAATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G Y119L P149V",3
"lib1","SARS-CoV-2","ATACTGTATATTGTAG",2,26.87,10.17,-0.59,0.07,2.88,1.04,0,">1 nonsynonymous","T55G F156S",2
"lib1","SARS-CoV-2","ATACTGTATCTAAGGT",1,22.33,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","P7K V37M A89L D98P N120L",5
"lib1","SARS-CoV-2","ATACTGTATTCCACTA",5,1.1,NA,NA,NA,NA,NA,NA,"stop","D34I D90R G152*",3
"lib1","SARS-CoV-2","ATACTGTCATAAGTTG",1,7.47,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8R F47L C61P Y119I",4
"lib1","SARS-CoV-2","ATACTGTCCTCATCAC",2,109.61,10.09,-0.68,0.05,2.76,1.03,0,">1 nonsynonymous","Y21M S41T",2
"lib1","SARS-CoV-2","ATACTGTCGGATTTAC",2,6.18,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","ATACTTAAAACTCTCA",5,28.7,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68V G86V K94P C158Y",4
"lib1","SARS-CoV-2","ATACTTAACCGACATA",5,128.48,10.86,0.1,0.06,2.95,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATACTTAACGACTCGG",1,2.84,NA,NA,NA,NA,NA,NA,"stop","A22P D75M R136I V173*",4
"lib1","SARS-CoV-2","ATACTTAACGTGTTTA",5,24.49,6.02,-4.75,1.4,1.5,1.27,0.04,">1 nonsynonymous","W23R I28L K56A L162A",4
"lib1","SARS-CoV-2","ATACTTACAAGAAGCT",9,184.18,10.7,-0.07,0.05,2.85,1.05,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","ATACTTACAATTCGGA",2,14.58,6,-4.76,0.98,1.5,1.15,0.01,">1 nonsynonymous","L38P Y91T",2
"lib1","SARS-CoV-2","ATACTTACCCAACCGC",2,35.5,9.99,-0.77,0.21,1.61,1.09,0.01,"1 nonsynonymous","I28E",1
"lib1","SARS-CoV-2","ATACTTACCCGACTAA",2,39.86,8.95,-1.81,0.08,2.02,1.11,0,">1 nonsynonymous","F44L Y123E",2
"lib1","SARS-CoV-2","ATACTTACCGAATGAA",18,4.4,NA,NA,NA,NA,NA,NA,"stop","N157L T201*",2
"lib1","SARS-CoV-2","ATACTTACGATGCCAC",12,195.33,9.81,-0.96,0.12,1.87,1.1,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","ATACTTACGTCTTGAC",6,83,10.65,-0.11,0.08,2.87,1.1,0,"1 nonsynonymous","L60H",1
"lib1","SARS-CoV-2","ATACTTACTAACAACG",2,42.1,9.95,-0.81,0.03,2.97,1.01,0,">1 nonsynonymous","T55S K87E V194A",3
"lib1","SARS-CoV-2","ATACTTACTATAATAA",3,63.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N40P L60A N92G Y178K",4
"lib1","SARS-CoV-2","ATACTTACTTAGGTAG",4,74.4,7.18,-3.58,0.33,1.5,1.17,0.02,">1 nonsynonymous","K56V A67T P96N",3
"lib1","SARS-CoV-2","ATACTTAGCACCGAGG",2,29.14,10.55,-0.22,0.14,2.75,1.14,0.01,">1 nonsynonymous","V37M T100L",2
"lib1","SARS-CoV-2","ATACTTATCAAAACAG",4,2.06,NA,NA,NA,NA,NA,NA,"stop","L5P P96Q K128* N130R",4
"lib1","SARS-CoV-2","ATACTTCAGATAAATA",2,66.49,8.94,-1.82,0.13,2.61,1.11,0.01,">1 nonsynonymous","G83D P169G",2
"lib1","SARS-CoV-2","ATACTTCATAGGGTAA",11,131.9,9.96,-0.81,0.09,2.33,1.04,0,"1 nonsynonymous","I72M",1
"lib1","SARS-CoV-2","ATACTTCATCGACACG",6,32.54,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T46V C49H V77T L122M",4
"lib1","SARS-CoV-2","ATACTTCATTAACAAA",2,20.45,10.66,-0.1,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTTCATTCACAGT",1,11.2,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","K56G I80E T100N N110E",4
"lib1","SARS-CoV-2","ATACTTCCAAAATTGA",5,54.66,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N58E G83T V103L N118V",4
"lib1","SARS-CoV-2","ATACTTCCCGATAAAC",7,114.29,10.68,-0.09,0.07,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTTCCTGCTTCTT",2,7.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N24C K48N V182F",3
"lib1","SARS-CoV-2","ATACTTCCTGGTTCCC",1,26.27,10.77,0.01,0.09,2.85,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","ATACTTCTAACGGACT",4,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N L57G",2
"lib1","SARS-CoV-2","ATACTTGAAGCACGGC",2,13.41,8.78,-1.98,0.25,2.72,1.18,0.04,">1 nonsynonymous","N64F F126A T140M",3
"lib1","SARS-CoV-2","ATACTTGAATTAGGTA",1,6.46,8.76,-2,0.11,2.93,1,0,">1 nonsynonymous","E154G T170C",2
"lib1","SARS-CoV-2","ATACTTGACCCGCAGT",1,23.35,8.44,-2.33,0.17,1.5,1.06,0.02,">1 nonsynonymous","P7L R136P V173I",3
"lib1","SARS-CoV-2","ATACTTGACGTATCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35C S184*",2
"lib1","SARS-CoV-2","ATACTTGAGACCATCT",5,44.73,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A18R K48I V77M W106M P133R Y175W",6
"lib1","SARS-CoV-2","ATACTTGAGGTCCGGA",4,27.89,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A105P N120S N171W",3
"lib1","SARS-CoV-2","ATACTTGATCACTACG",3,36.26,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","E76G I104C G116S Y143P",4
"lib1","SARS-CoV-2","ATACTTGATGAAATCC",8,111.17,10.32,-0.45,0.05,2.89,1.05,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","ATACTTGATTAATTAC",4,32.94,6.02,-4.74,0.8,1.5,1.12,0.01,">1 nonsynonymous","G9S I88M C102I P169S",4
"lib1","SARS-CoV-2","ATACTTGATTATAGTC",4,0.44,NA,NA,NA,NA,NA,NA,"stop","V52Y A81*",2
"lib1","SARS-CoV-2","ATACTTGCTCTTTCCC",1,9.13,10.21,-0.56,0.12,2.82,1.04,0.02,">1 nonsynonymous","K87A E141I P149S",3
"lib1","SARS-CoV-2","ATACTTGGAAACGAAG",4,8.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13D G83V V103R Y175L",4
"lib1","SARS-CoV-2","ATACTTGGTAACCTAA",3,33.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P54A V77L P177D",3
"lib1","SARS-CoV-2","ATACTTGGTTATAAAA",1,78.64,10.7,-0.06,0.09,2.85,1.04,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","ATACTTGTCCCTCACT",1,16.05,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C61V Y66K D112K N120H C150Y V153G N171S R179W",8
"lib1","SARS-CoV-2","ATACTTGTGATTCATG",3,11.02,6,-4.76,2,1.87,1.2,0.04,">1 nonsynonymous","T3C C61L V77H G83C Y91A W106K Y143W G152N",8
"lib1","SARS-CoV-2","ATACTTTAACTTACTT",6,94.73,10.73,-0.04,0.06,2.89,1.05,0,">1 nonsynonymous","P149D P191S",2
"lib1","SARS-CoV-2","ATACTTTAAGTTATAT",2,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V V77T T148F",3
"lib1","SARS-CoV-2","ATACTTTAATCAATCA",3,29.01,7.7,-3.06,0.35,1.5,1.17,0.04,"1 nonsynonymous","R25I",1
"lib1","SARS-CoV-2","ATACTTTACAACCCCA",6,43.14,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F17R R25T Y91N P161D",4
"lib1","SARS-CoV-2","ATACTTTACTAATAAA",6,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","ATACTTTACTGAGAGC",11,178.58,9.72,-1.04,0.03,2.85,1.06,0,">1 nonsynonymous","A14E S129N F156S",3
"lib1","SARS-CoV-2","ATACTTTAGGAAAGTT",7,72.49,6,-4.76,2,3,1.16,0,">1 nonsynonymous","A89L G172C P197K",3
"lib1","SARS-CoV-2","ATACTTTATGTCCAGC",9,0.54,NA,NA,NA,NA,NA,NA,"stop","A18T R27K T55* C61Y F156T",5
"lib1","SARS-CoV-2","ATACTTTATTTACCAA",5,15.92,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10D S41L L57H S113L P161F",5
"lib1","SARS-CoV-2","ATACTTTCACAGGAGG",1,51.7,10.39,-0.38,0.04,2.91,1,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","ATACTTTGACATATAC",8,14.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5E C49R F62T A105D Y119L",5
"lib1","SARS-CoV-2","ATACTTTGAGAATAGA",4,1.34,NA,NA,NA,NA,NA,NA,"stop","F8T G174*",2
"lib1","SARS-CoV-2","ATACTTTGGAGCTACA",4,48.79,6,-4.76,1.88,1.5,1.16,0.01,">1 nonsynonymous","I142N G155N V180S",3
"lib1","SARS-CoV-2","ATACTTTTCCCGAATT",2,6.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L S139G T201E",3
"lib1","SARS-CoV-2","ATACTTTTGCATTAGG",6,35.03,10.7,-0.07,0.04,2.87,1.08,0,">1 nonsynonymous","L5F D97T",2
"lib1","SARS-CoV-2","ATACTTTTGTTTTTTA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","F47S T55L C61* D98G E154Q",5
"lib1","SARS-CoV-2","ATACTTTTTAATAACA",1,20.56,10.74,-0.02,0.07,2.92,1.05,0,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","ATACTTTTTCTAGGAT",2,84.13,10.8,0.03,0.08,2.89,1.08,0,"1 nonsynonymous","T3E",1
"lib1","SARS-CoV-2","ATAGAAAAAAAAACCA",9,135.4,8.76,-2,0.09,2.73,1.12,0,">1 nonsynonymous","N58S A105S N157S",3
"lib1","SARS-CoV-2","ATAGAAAAAAGGGTCC",6,18.17,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N24F P96S L122Y G146M",4
"lib1","SARS-CoV-2","ATAGAAAAAATTTACA",1,91.73,9.86,-0.91,0.04,2.91,1.03,0,">1 nonsynonymous","K87L G155E T201D",3
"lib1","SARS-CoV-2","ATAGAAAAACATGAAA",3,31.66,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","L95R Y165A",2
"lib1","SARS-CoV-2","ATAGAAAAAGCACCCT",4,22.71,10.45,-0.32,0.1,2.85,1.04,0,">1 nonsynonymous","L5K A33V A105S T201R",4
"lib1","SARS-CoV-2","ATAGAAAACAGACTGA",2,9.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T100P T148M Q168M G174Q",4
"lib1","SARS-CoV-2","ATAGAAAACGATTACA",1,18.33,6.09,-4.68,0.87,1.5,1.14,0.02,">1 nonsynonymous","A42I L95R",2
"lib1","SARS-CoV-2","ATAGAAAACTGATGTA",4,89.7,10.68,-0.08,0.07,2.92,1.04,0,">1 nonsynonymous","T3R A33V",2
"lib1","SARS-CoV-2","ATAGAAAAGAGAAATA",2,87.85,10.67,-0.09,0.05,2.89,1.06,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","ATAGAAAAGCTCTCAC",3,32.41,6,-4.76,1.28,1.5,1.18,0.01,">1 nonsynonymous","A14Y Y35H S45Q P54W N110K L125F I142Y V180N",8
"lib1","SARS-CoV-2","ATAGAAAAGGAAAGAC",1,10.8,6,-4.76,1.85,1.5,1.17,0.03,">1 nonsynonymous","F47D L125W E141G",3
"lib1","SARS-CoV-2","ATAGAAAATACCTACT",9,54.37,8.83,-1.93,0.15,1.5,1.05,0.01,">1 nonsynonymous","F44I K94L",2
"lib1","SARS-CoV-2","ATAGAAAATTTCCTTG",4,12.87,6,-4.76,2,3,1.22,0,">1 nonsynonymous","W23P Y50L V115L K128L",4
"lib1","SARS-CoV-2","ATAGAAACAAGAACGC",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A Y50D K56R W106R V173T",5
"lib1","SARS-CoV-2","ATAGAAACCACTCACC",4,31.57,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F44S T63S I88M C158M",4
"lib1","SARS-CoV-2","ATAGAAACGAAAAGGA",17,232.92,8.29,-2.48,0.16,1.91,1.06,0.01,">1 nonsynonymous","Y35N S147Y G166M",3
"lib1","SARS-CoV-2","ATAGAAACGAAACTCG",15,230.94,10.72,-0.04,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAAACGGGGACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42W T55G V71L K114* V153D",5
"lib1","SARS-CoV-2","ATAGAAACGGTTGGAG",2,22.37,10.23,-0.54,0.1,2.96,1,0.01,">1 nonsynonymous","T55M K87C D98K",3
"lib1","SARS-CoV-2","ATAGAAACTAATATAG",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A Y93F",2
"lib1","SARS-CoV-2","ATAGAAACTCACAAAA",2,15.55,10.54,-0.23,0.14,2.73,1,0.01,">1 nonsynonymous","A42W F134H",2
"lib1","SARS-CoV-2","ATAGAAACTTAGGGAA",1,16.49,9.94,-0.83,0.31,1.66,1,0.02,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","ATAGAAACTTATACTA",7,45.71,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R25F A42S D59V I104Y",4
"lib1","SARS-CoV-2","ATAGAAAGAACAAAAC",3,62.76,8.54,-2.23,0.12,2.77,1.03,0.01,"1 nonsynonymous","Y175M",1
"lib1","SARS-CoV-2","ATAGAAAGAATACGAC",3,52.57,6.41,-4.35,0.48,1.5,1.19,0.02,">1 nonsynonymous","N24W S43L Y50I K56P P96F",5
"lib1","SARS-CoV-2","ATAGAAAGATCAAAAA",3,72.68,10.18,-0.58,0.05,2.83,1.01,0,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","ATAGAAAGATTCAAAA",3,50.76,9.82,-0.94,0.12,1.98,1.06,0.01,"1 nonsynonymous","F17T",1
"lib1","SARS-CoV-2","ATAGAAAGCATCTACT",2,20.66,10.83,0.06,0.06,2.99,1.03,0,"1 nonsynonymous","T140M",1
"lib1","SARS-CoV-2","ATAGAAAGGCACCTAC",2,18.78,7.83,-2.93,0.33,1.57,1.09,0.04,"1 nonsynonymous","R73W",1
"lib1","SARS-CoV-2","ATAGAAAGGTCCAAGT",5,1.13,NA,NA,NA,NA,NA,NA,"stop","V77* K87C K94F T148L",4
"lib1","SARS-CoV-2","ATAGAAATAAACAATG",4,21.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I28R S43K Y50K G101S G155S L162D G196V",7
"lib1","SARS-CoV-2","ATAGAAATACCAACTG",1,25.74,10.7,-0.07,0.07,3,1.02,0,">1 nonsynonymous","V37L N64D",2
"lib1","SARS-CoV-2","ATAGAAATAGTGGCCA",5,3192.77,10.56,-0.21,0.03,2.93,1.01,0,">1 nonsynonymous","L60T S147Y V173L",3
"lib1","SARS-CoV-2","ATAGAAATATTCTGGC",3,52.03,10.68,-0.09,0.04,2.91,1,0,">1 nonsynonymous","G9Q T15R V37Q N110I",4
"lib1","SARS-CoV-2","ATAGAAATCAGCGAAA",3,38.33,10.81,0.05,0.06,2.91,1.01,0,"1 nonsynonymous","G155K",1
"lib1","SARS-CoV-2","ATAGAAATCTGACAGA",5,39.89,10.08,-0.69,0.11,1.94,1.06,0,">1 nonsynonymous","N13K L95M T140A",3
"lib1","SARS-CoV-2","ATAGAAATTCATAATG",3,32.33,8.73,-2.03,0.2,1.72,1.19,0.02,">1 nonsynonymous","F8T Y21V",2
"lib1","SARS-CoV-2","ATAGAAATTCCACCTA",3,26.25,8.7,-2.06,0.3,1.5,1,0.03,">1 nonsynonymous","L5F R16K S43K D90Q V103T P133E",6
"lib1","SARS-CoV-2","ATAGAAATTGTACGCG",4,55.67,9.62,-1.15,0.15,1.86,1.09,0.01,">1 nonsynonymous","L38M T85G S164L V173L G196L",5
"lib1","SARS-CoV-2","ATAGAAATTTGACGGA",1,3.18,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAACAAAACGATG",3,57.62,10.67,-0.1,0.07,2.85,1.08,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","ATAGAACAAAAGTATA",3,40.99,10.02,-0.75,0.07,2.42,1.09,0,">1 nonsynonymous","L122S R127H S147I",3
"lib1","SARS-CoV-2","ATAGAACAAGCACCCA",1,17.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143M Y165M G174S S184V",4
"lib1","SARS-CoV-2","ATAGAACAAGCGAGAG",7,62.45,9.93,-0.83,0.07,2.07,1.05,0,">1 nonsynonymous","C6L N13R",2
"lib1","SARS-CoV-2","ATAGAACAAGTAATGA",2,20.42,10.21,-0.56,0.1,2.8,1,0,">1 nonsynonymous","T3V E154Q Y178A",3
"lib1","SARS-CoV-2","ATAGAACAATATTTCT",2,12.31,10.29,-0.47,0.16,2.86,1,0.01,">1 nonsynonymous","L131M A190F",2
"lib1","SARS-CoV-2","ATAGAACACAAAGACA",4,33.35,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S36F A42T N130G G174W R179F",5
"lib1","SARS-CoV-2","ATAGAACAGGCGCCAG",2,20.62,10.15,-0.62,0.07,2.74,1.07,0,">1 nonsynonymous","G51R N58M S139D P149R",4
"lib1","SARS-CoV-2","ATAGAACATAATTACA",3,26.49,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I80K K94Y T201E",3
"lib1","SARS-CoV-2","ATAGAACCACTGAAGT",3,62.78,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R16V A81K P96H E154G",4
"lib1","SARS-CoV-2","ATAGAACCCATCGTTC",2,12.47,8.86,-1.9,0.14,2.03,1.09,0.01,">1 nonsynonymous","V71A K128T P169T T201I",4
"lib1","SARS-CoV-2","ATAGAACCCGTTCTGA",6,54.65,10.66,-0.1,0.07,2.88,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAACCGATAGGGC",1,26.25,10.69,-0.08,0.06,2.93,1.04,0,"1 nonsynonymous","L60G",1
"lib1","SARS-CoV-2","ATAGAACGAAAAGAAA",2,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F T15N S45E Y91W P161L",5
"lib1","SARS-CoV-2","ATAGAACGACTATATA",5,73.13,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N1G K114D P177R",3
"lib1","SARS-CoV-2","ATAGAACGACTTGATA",3,34.1,10.76,-0.01,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAACGCAATAAAA",7,117.57,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","G9N A33Q F134K G146V",4
"lib1","SARS-CoV-2","ATAGAACTATTCGTCT",1,18.21,6,-4.76,2,3,1.15,0.02,">1 nonsynonymous","S113W G146Q G174M",3
"lib1","SARS-CoV-2","ATAGAACTCCACAGTT",4,9.53,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D90C P149T L183N",3
"lib1","SARS-CoV-2","ATAGAACTGATTCTAC",1,33.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L A81I F160G",3
"lib1","SARS-CoV-2","ATAGAACTTCAGAAAC",3,142.66,10.71,-0.05,0.07,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAAGAATAAGCGC",2,15.77,10.2,-0.56,0.22,1.99,1.05,0.04,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","ATAGAAGAATAGCAGT",5,54.31,6,-4.76,2,3,1.17,0,">1 nonsynonymous","L5S S69E S139L G174R G196W",5
"lib1","SARS-CoV-2","ATAGAAGAATTACAAT",12,233.79,10.5,-0.26,0.04,2.89,1.03,0,">1 nonsynonymous","A14S L60Q S129R",3
"lib1","SARS-CoV-2","ATAGAAGCGCTTGTAA",6,68.35,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A81I N157R",2
"lib1","SARS-CoV-2","ATAGAAGCTCACAATC",3,22.12,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","R124Q G174D",2
"lib1","SARS-CoV-2","ATAGAAGGTGAGACGA",1,8.69,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","I88Y Y93L N107F A145G",4
"lib1","SARS-CoV-2","ATAGAAGTACGAGTAT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","N64* T100N E141V",3
"lib1","SARS-CoV-2","ATAGAAGTCAAACAGA",4,25.22,9.02,-1.74,0.2,1.5,1.14,0.02,">1 nonsynonymous","A67S R73T",2
"lib1","SARS-CoV-2","ATAGAAGTCCGTTGAA",1,34.49,10.64,-0.13,0.05,2.99,1.01,0,"1 nonsynonymous","K48T",1
"lib1","SARS-CoV-2","ATAGAATAACTCCCAG",1,16,10.47,-0.3,0.13,2.81,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAATACTATGCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I88L Y121* V173S Y178T",4
"lib1","SARS-CoV-2","ATAGAATAGAAAAAAG",2,15.65,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9S T63A E141M Y165K G174A",5
"lib1","SARS-CoV-2","ATAGAATAGAAACCTG",11,220.21,10.68,-0.08,0.05,2.85,1.02,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","ATAGAATATCAAAACT",6,98.04,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A14N V180Y",2
"lib1","SARS-CoV-2","ATAGAATCCCAGGTGT",7,42.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2E K56L G101S",3
"lib1","SARS-CoV-2","ATAGAATCCGGGTCTA",22,144.42,6,-4.76,1.58,1.5,1.2,0.01,">1 nonsynonymous","F62T P161R P197V",3
"lib1","SARS-CoV-2","ATAGAATCTCACAGGT",6,17.18,6.39,-4.38,0.61,1.5,1.16,0.03,">1 nonsynonymous","C6Y A22K A89L N130G",4
"lib1","SARS-CoV-2","ATAGAATCTCACCAAA",3,27.59,9.58,-1.18,0.17,1.76,1.1,0.01,">1 nonsynonymous","T55K S69M D97F V115Y",4
"lib1","SARS-CoV-2","ATAGAATCTGTTTACA",1,18.26,6.01,-4.76,1.06,1.5,1.11,0.02,">1 nonsynonymous","V11I P96R R127E I142M P191N",5
"lib1","SARS-CoV-2","ATAGAATGATCTATAC",1,49.67,10.64,-0.12,0.05,2.87,1.06,0,"1 nonsynonymous","A42L",1
"lib1","SARS-CoV-2","ATAGAATGGACTTCGC",1,16.47,8.74,-2.03,0.16,2.07,1.12,0.01,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","ATAGAATTAGTAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S45T S69V G86* N110S R179L",5
"lib1","SARS-CoV-2","ATAGAATTAGTTAAAT",8,76.33,10.52,-0.25,0.06,2.85,1.05,0,">1 nonsynonymous","V52C K132D",2
"lib1","SARS-CoV-2","ATAGAATTCAATTACA",9,66.83,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2Q G101F E154R",3
"lib1","SARS-CoV-2","ATAGAATTCAGCCAAT",1,15.25,10.75,-0.01,0.07,3,1,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","ATAGAATTCATGACCA",2,32.26,10.75,-0.01,0.04,2.96,1.01,0,">1 nonsynonymous","K128S T201K",2
"lib1","SARS-CoV-2","ATAGAATTCTGTTCAT",6,169.97,10.73,-0.03,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAGAATTTAGACACC",2,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22G I104S Y123H",3
"lib1","SARS-CoV-2","ATAGACAAAAATACGG",2,7.1,6.13,-4.64,2,3,1.15,0.01,">1 nonsynonymous","S41Y N58P E76R F99L Q144N",5
"lib1","SARS-CoV-2","ATAGACAACACTAGAT",2,70.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V37G C61G K132N F167A",4
"lib1","SARS-CoV-2","ATAGACAACAGCAATA",5,30.13,10.45,-0.31,0.07,2.95,1.03,0,">1 nonsynonymous","L122T V181I",2
"lib1","SARS-CoV-2","ATAGACACGACGCGTT",4,42.46,10.77,0,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGACAGAAAACAAA",3,87.18,6.11,-4.66,1.26,1.5,1.25,0.03,">1 nonsynonymous","N1M C61Q K94P I138N E154Y P177T",6
"lib1","SARS-CoV-2","ATAGACAGTAAATGAC",5,70.11,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K87Y Y119I D137P",3
"lib1","SARS-CoV-2","ATAGACATAATCACTA",2,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47E L95A F99N N107K Q144G Y165V G174W E186D",8
"lib1","SARS-CoV-2","ATAGACATACTAAAAA",4,97.62,10.62,-0.14,0.03,2.9,1.05,0,">1 nonsynonymous","G9K T46V",2
"lib1","SARS-CoV-2","ATAGACATTAAATAAA",3,64.37,10.6,-0.16,0.04,2.94,1.03,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","ATAGACCAAGAAACTA",3,81.12,10.38,-0.38,0.07,2.95,1.02,0,">1 nonsynonymous","V32T S41H G83L N110K V115F",5
"lib1","SARS-CoV-2","ATAGACCACAGGTTAT",1,2.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","ATAGACCATATAGTCC",2,37.69,9.56,-1.21,0.17,1.74,1.16,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","ATAGACCATTTCACCT",2,70.73,9.33,-1.43,0.05,2.76,1.07,0,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","ATAGACCCGCCCTATG",9,93.55,10.87,0.11,0.1,2.94,1.02,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","ATAGACCCTGACCCAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","N64* A89R K128R",3
"lib1","SARS-CoV-2","ATAGACCCTGTCAGAT",4,24.83,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V37R F99W P149V G166E S184K",5
"lib1","SARS-CoV-2","ATAGACCGCTCACAGC",3,16.65,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I2Q I88P N151F",3
"lib1","SARS-CoV-2","ATAGACCGGCCAATCA",2,12.24,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F12N N157W",2
"lib1","SARS-CoV-2","ATAGACCTCATAAAAC",4,10.81,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","F8R C150N",2
"lib1","SARS-CoV-2","ATAGACGCAAAGTTGA",7,39.62,6.17,-4.59,0.39,1.5,1.13,0.01,">1 nonsynonymous","F44L G51A D98C Y121S E141R E154S",6
"lib1","SARS-CoV-2","ATAGACGCCGCAATAC",2,21.26,10.75,-0.01,0.08,2.86,1.12,0,"1 nonsynonymous","L5M",1
"lib1","SARS-CoV-2","ATAGACGCGTCACTTT",1,3.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","ATAGACGGAATTAGTG",5,16.77,6.21,-4.56,0.76,1.5,1.15,0.04,">1 nonsynonymous","V32W V182N",2
"lib1","SARS-CoV-2","ATAGACGTACTCAAGG",1,27.26,10.79,0.02,0.09,2.9,1.05,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","ATAGACGTACTCTAGC",2,16.15,10.7,-0.06,0.08,2.96,1,0,">1 nonsynonymous","K87R G196V",2
"lib1","SARS-CoV-2","ATAGACGTGGAAATTG",11,59.86,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","W23P Y35G D97N V180S",4
"lib1","SARS-CoV-2","ATAGACTAAAGATACA",4,41,9.3,-1.47,0.12,1.9,1.12,0.01,">1 nonsynonymous","N4D F12S",2
"lib1","SARS-CoV-2","ATAGACTAAGCTACAA",5,0.44,NA,NA,NA,NA,NA,NA,"stop","T63G E154*",2
"lib1","SARS-CoV-2","ATAGACTAAGTTAGGG",3,1.48,NA,NA,NA,NA,NA,NA,"stop","I2L D34I D112*",3
"lib1","SARS-CoV-2","ATAGACTACGGTGCCA",1,20.47,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","Y119I F167L",2
"lib1","SARS-CoV-2","ATAGACTACTTATCCA",4,13.53,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C61G D68K E76Y",3
"lib1","SARS-CoV-2","ATAGACTAGCAAGTTT",5,42.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T S129L",2
"lib1","SARS-CoV-2","ATAGACTATAAAAGGG",1,15.25,8.73,-2.03,0.15,2.65,1.13,0.01,">1 nonsynonymous","R27D G166R",2
"lib1","SARS-CoV-2","ATAGACTCCGCAAAAC",2,30.64,6.89,-3.87,0.61,1.5,1.11,0.06,">1 nonsynonymous","C61F P161L",2
"lib1","SARS-CoV-2","ATAGACTCCTATAAGC",2,81.78,10.31,-0.46,0.07,2.73,1.05,0,">1 nonsynonymous","G9F R16L S29T D97I",4
"lib1","SARS-CoV-2","ATAGACTCGCGTGCGA",1,25.32,10.67,-0.09,0.05,2.94,1.07,0,">1 nonsynonymous","N40R P149R",2
"lib1","SARS-CoV-2","ATAGACTGACGTGGTT",4,27.12,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F17S S29G S41I G86C D112W Q163I",6
"lib1","SARS-CoV-2","ATAGACTTAACAATAT",12,213.37,10.72,-0.04,0.06,2.91,1.06,0,"1 nonsynonymous","K114Q",1
"lib1","SARS-CoV-2","ATAGACTTAAGATCAT",4,12.89,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V32Y K87Y D98R W106R T140N Q144R",6
"lib1","SARS-CoV-2","ATAGACTTATGGCGCA",6,0.56,NA,NA,NA,NA,NA,NA,"stop","I2H S41I L60D G117* P197T",5
"lib1","SARS-CoV-2","ATAGACTTATTATGAC",3,50.6,10.14,-0.63,0.06,2.93,1,0,">1 nonsynonymous","C31V K56S",2
"lib1","SARS-CoV-2","ATAGACTTCTTGCTAA",1,8.27,6,-4.76,2,3,1.12,0,">1 nonsynonymous","W23L T55F G101V A105G Y123W G146W",6
"lib1","SARS-CoV-2","ATAGACTTGAGGGCGG",6,72.99,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L131V P161F",2
"lib1","SARS-CoV-2","ATAGAGAAAATTATAG",2,54.85,10.75,-0.02,0.06,2.89,1.07,0,"1 nonsynonymous","G196N",1
"lib1","SARS-CoV-2","ATAGAGAAACAAAGGA",3,1,NA,NA,NA,NA,NA,NA,"stop","R73P D98* S129G P149*",4
"lib1","SARS-CoV-2","ATAGAGAAGATACCTA",4,65.76,8.5,-2.27,0.27,1.5,1,0.02,">1 nonsynonymous","I28N S45C C61H K199T",4
"lib1","SARS-CoV-2","ATAGAGAATATCGCAT",3,19.61,10.61,-0.15,0.13,2.68,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAGAATGGTAAGC",4,66.95,8.56,-2.2,0.11,1.85,1.09,0,">1 nonsynonymous","V11N Q168N",2
"lib1","SARS-CoV-2","ATAGAGACCCGTAAGG",2,16.98,6.32,-4.44,0.67,1.5,1.15,0.06,">1 nonsynonymous","T15Y W23L S53F F62C",4
"lib1","SARS-CoV-2","ATAGAGACTTCCAATT",1,6.16,10.64,-0.13,0.08,2.84,1.03,0,"1 nonsynonymous","S200R",1
"lib1","SARS-CoV-2","ATAGAGAGACGCATTG",8,176.29,10.34,-0.42,0.04,2.87,1,0,">1 nonsynonymous","S41G Y91L",2
"lib1","SARS-CoV-2","ATAGAGAGATACAAAT",2,38.74,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y93G R127T K198Q",3
"lib1","SARS-CoV-2","ATAGAGAGTATTTTTC",3,38.05,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5C S43L F62N I104M T140Y F160C P169I",7
"lib1","SARS-CoV-2","ATAGAGATAAACCTGG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","N1L Y35* D59N I80S",4
"lib1","SARS-CoV-2","ATAGAGATAACAAGTA",3,46.85,10.7,-0.06,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAGATGAGACAAA",4,39.43,10.14,-0.62,0.05,2.79,1,0,">1 nonsynonymous","F44R G116N",2
"lib1","SARS-CoV-2","ATAGAGCAAGAAGGCA",5,124.75,10.21,-0.55,0.05,2.81,1.01,0,">1 nonsynonymous","R27C N40H T46M D59N",4
"lib1","SARS-CoV-2","ATAGAGCAGTAGAAAT",2,23.59,9.89,-0.87,0.16,1.71,1.14,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","ATAGAGCATACCAGGG",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y F70Y P96I",3
"lib1","SARS-CoV-2","ATAGAGCATATCTCGC",7,90.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8L G86V D137R Y175K S200C",5
"lib1","SARS-CoV-2","ATAGAGCATGGTATAA",3,18.05,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y39N G51C N118T",3
"lib1","SARS-CoV-2","ATAGAGCCAGAAGAAG",2,0.69,NA,NA,NA,NA,NA,NA,"stop","C6E T148L G172* V173A R179K V182F",6
"lib1","SARS-CoV-2","ATAGAGCCGGGTCTAC",6,153.18,8.48,-2.28,0.11,2.37,1.1,0,">1 nonsynonymous","Y165Q V173D",2
"lib1","SARS-CoV-2","ATAGAGCGATTTCGAT",10,56.59,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K56H A67H V103T N157M",4
"lib1","SARS-CoV-2","ATAGAGCTACAACTTA",1,9.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V37S F62S N107Y C158M",4
"lib1","SARS-CoV-2","ATAGAGCTAGGTTGAA",21,308.63,10.81,0.04,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAGCTGACAGTGT",6,62.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S43W Y91C N107C Y123W",4
"lib1","SARS-CoV-2","ATAGAGGAAAACAAGC",1,22.62,6,-4.76,1.84,2.98,1.09,0,">1 nonsynonymous","K26W L95Q D112P N151P G155N",5
"lib1","SARS-CoV-2","ATAGAGGCAATATTCT",4,81.33,10.44,-0.32,0.04,2.92,1.01,0,">1 nonsynonymous","P7M V173Y",2
"lib1","SARS-CoV-2","ATAGAGGCTAAGAATG",3,77.1,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T63H C150I K198T",3
"lib1","SARS-CoV-2","ATAGAGGGAAATCACA",5,59.68,10.61,-0.15,0.04,2.94,1,0,">1 nonsynonymous","L5Q D97F L122I",3
"lib1","SARS-CoV-2","ATAGAGGTAATCCTTT",5,0.27,NA,NA,NA,NA,NA,NA,"stop","V20P N40R T46R A81F G155S Q168*",6
"lib1","SARS-CoV-2","ATAGAGGTAGACGTCC",1,42.6,10.13,-0.64,0.16,1.75,1.02,0.01,">1 nonsynonymous","S29P D97S Y123L L183I",4
"lib1","SARS-CoV-2","ATAGAGGTATAATTTC",5,70.49,10.63,-0.14,0.07,2.9,1.08,0,">1 nonsynonymous","N58D I104M",2
"lib1","SARS-CoV-2","ATAGAGGTGATATAGG",2,9.92,7.28,-3.49,0.17,1.5,1.08,0.01,">1 nonsynonymous","F8Y G86C K198L",3
"lib1","SARS-CoV-2","ATAGAGTAACCTCTAT",1,18.52,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","D68W D90N P133E",3
"lib1","SARS-CoV-2","ATAGAGTAATTAGTAC",3,0.5,NA,NA,NA,NA,NA,NA,"stop","G9S Y39H W106*",3
"lib1","SARS-CoV-2","ATAGAGTAGAAGGCAG",3,80.74,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9W Y39T F47D K94A Y123L L162V",6
"lib1","SARS-CoV-2","ATAGAGTATAAAAAGA",2,6.54,10.71,-0.05,0.14,2.94,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATAGAGTGCCAATTTG",4,19.42,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","S29A I88E T148D C158K",4
"lib1","SARS-CoV-2","ATAGAGTGTAATACAA",4,0.2,NA,NA,NA,NA,NA,NA,"stop","K56M T63* F160G P191A",4
"lib1","SARS-CoV-2","ATAGATAAAAGACATC",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R F44R E76S F99G",4
"lib1","SARS-CoV-2","ATAGATAAAATACCTA",7,0.72,NA,NA,NA,NA,NA,NA,"stop","C49S N58I D90*",3
"lib1","SARS-CoV-2","ATAGATAAATGTAGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K48I C61* I142V",3
"lib1","SARS-CoV-2","ATAGATAACCTTAGAC",3,6.91,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","N118R T140E C150F",3
"lib1","SARS-CoV-2","ATAGATAACTATTCAC",6,83.58,10.23,-0.54,0.05,2.88,1.03,0,">1 nonsynonymous","A42R D59V S164Y",3
"lib1","SARS-CoV-2","ATAGATAATAACTTCT",2,60.68,10.77,0,0.03,2.96,1.02,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","ATAGATAATAAGACGC",1,14.69,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S36K C49R C61Y K94E Y123F",5
"lib1","SARS-CoV-2","ATAGATACGAACAGAC",1,46.77,9,-1.76,0.08,2.61,1.16,0,">1 nonsynonymous","G146V T201N",2
"lib1","SARS-CoV-2","ATAGATACGAATCTAA",2,50.7,10.27,-0.5,0.07,2.97,1,0,">1 nonsynonymous","D59M G174Q",2
"lib1","SARS-CoV-2","ATAGATACTTATTACA",2,19.59,6.15,-4.61,0.46,2.04,1.11,0,">1 nonsynonymous","W23L P54C N120V V173F",4
"lib1","SARS-CoV-2","ATAGATAGCAGGAAAT",2,52.96,10.74,-0.02,0.04,2.99,1,0,">1 nonsynonymous","Y39A L60I",2
"lib1","SARS-CoV-2","ATAGATAGGACAGGCA",3,82.5,10.7,-0.06,0.08,2.88,1.08,0,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","ATAGATATACATCCGG",4,64.96,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R127P G152A C158T",3
"lib1","SARS-CoV-2","ATAGATATCAATGTGT",7,48.01,8.71,-2.05,0.16,1.67,1.15,0.01,">1 nonsynonymous","E10Q L122P",2
"lib1","SARS-CoV-2","ATAGATATCCCCAACT",3,30.33,10.83,0.06,0.08,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGATCAATACCAGT",4,36.28,6.25,-4.52,0.54,1.5,1.13,0.01,">1 nonsynonymous","F12T Y165V",2
"lib1","SARS-CoV-2","ATAGATCAATGGGTAC",11,127.57,9.64,-1.12,0.05,2.91,1.04,0,">1 nonsynonymous","L5R Y119N",2
"lib1","SARS-CoV-2","ATAGATCACTAGCCCA",2,23.01,10.72,-0.04,0.09,2.91,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGATCATCCTCCCC",6,32.28,9.7,-1.06,0.28,1.5,1.07,0.03,">1 nonsynonymous","D68M T100Y S200L",3
"lib1","SARS-CoV-2","ATAGATCCAACTCCAA",4,18.95,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","E10S N92L F156R G174L",4
"lib1","SARS-CoV-2","ATAGATCCGTCAAATT",7,44.24,10.55,-0.21,0.05,2.93,1,0,">1 nonsynonymous","T3V V37D S53I",3
"lib1","SARS-CoV-2","ATAGATCGAAGGTACC",1,45.34,10.47,-0.3,0.06,2.92,1,0,">1 nonsynonymous","T3R A18D",2
"lib1","SARS-CoV-2","ATAGATCTAAACCACT",10,156.56,10.22,-0.55,0.04,2.9,1.03,0,">1 nonsynonymous","L60Q N118Q",2
"lib1","SARS-CoV-2","ATAGATCTGGAATAAT",2,10.37,6,-4.76,2,3,1.04,0,">1 nonsynonymous","S113C R127L",2
"lib1","SARS-CoV-2","ATAGATGCAGTGATAT",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E F12K I104Q Y165V",4
"lib1","SARS-CoV-2","ATAGATGGAAGCAGAA",3,35.55,7.13,-3.63,0.33,1.5,1.05,0.03,">1 nonsynonymous","N1S L60Q R179V",3
"lib1","SARS-CoV-2","ATAGATGGAGAATCCA",5,49.95,10.45,-0.32,0.06,2.97,1.03,0,">1 nonsynonymous","D90S G116E",2
"lib1","SARS-CoV-2","ATAGATGGGGCATGTA",8,262.69,10.16,-0.6,0.06,2.85,1.02,0,">1 nonsynonymous","C6A P197L",2
"lib1","SARS-CoV-2","ATAGATGTAACTTAAG",4,101.96,6,-4.76,1.6,1.5,1.15,0.01,">1 nonsynonymous","F62G Y123A G146N G196E",4
"lib1","SARS-CoV-2","ATAGATGTACAAGATA",1,15.65,9.88,-0.88,0.09,2.81,1.01,0,">1 nonsynonymous","A89V D97E",2
"lib1","SARS-CoV-2","ATAGATGTATAAAGAT",4,35.88,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","L5V Q84L W106N T148P",4
"lib1","SARS-CoV-2","ATAGATGTGAAGAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V20R K94* E141S",3
"lib1","SARS-CoV-2","ATAGATGTGCAATTGG",2,115.71,8.42,-2.35,0.13,2.82,1.07,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","ATAGATGTGCTTCCTA",5,791.12,9.13,-1.63,0.09,2.3,1.08,0,">1 nonsynonymous","A33W D90R K128I T140L G174R L188H",6
"lib1","SARS-CoV-2","ATAGATTAAAAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6Y Y35* S53R P96T A105G",5
"lib1","SARS-CoV-2","ATAGATTAAGGATGCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66K L95M V103K T170S G174D",5
"lib1","SARS-CoV-2","ATAGATTAATCCAAAG",8,1.12,NA,NA,NA,NA,NA,NA,"stop","S113A E154*",2
"lib1","SARS-CoV-2","ATAGATTACGGTGTAT",12,2.79,NA,NA,NA,NA,NA,NA,"stop","L5R T85P C150*",3
"lib1","SARS-CoV-2","ATAGATTAGGGCTAAG",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V D90T N109F Q168F",4
"lib1","SARS-CoV-2","ATAGATTATACCGCAT",6,98.15,9.58,-1.18,0.1,1.86,1.07,0,">1 nonsynonymous","Y35H E141S G152R",3
"lib1","SARS-CoV-2","ATAGATTATACGTACA",2,113.54,9.77,-0.99,0.04,2.87,1.04,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","ATAGATTATGTCCCGG",2,6.83,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","ATAGATTCACAGATAA",2,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118D F126D L162S",3
"lib1","SARS-CoV-2","ATAGATTGAAGATACT",5,46.28,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37N F70L G101R",3
"lib1","SARS-CoV-2","ATAGATTGCAAACGTA",3,16.09,9.77,-0.99,0.16,2.07,1.1,0.01,">1 nonsynonymous","R27V K48R T55W I88L T100Y S129F",6
"lib1","SARS-CoV-2","ATAGATTGCTACAAAA",3,63.34,10.69,-0.08,0.02,2.91,1.04,0,"1 nonsynonymous","S184K",1
"lib1","SARS-CoV-2","ATAGATTGGCTAATAG",4,55.06,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F17I Y35H Y121C",3
"lib1","SARS-CoV-2","ATAGATTGGTATGGAA",3,23.67,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12E L38F L95N K132M V173H",5
"lib1","SARS-CoV-2","ATAGATTTGATTTGTT",5,57.71,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I28L L60K L95P R127T",4
"lib1","SARS-CoV-2","ATAGATTTGCACATAT",4,36.44,9.68,-1.09,0.37,1.5,1,0.08,">1 nonsynonymous","A105M N120I N130T E141R",4
"lib1","SARS-CoV-2","ATAGATTTTCCAGTTA",10,115.78,10.53,-0.24,0.06,2.9,1.06,0,">1 nonsynonymous","N13E L122R E154G",3
"lib1","SARS-CoV-2","ATAGCAAAATATAAAC",1,14.52,6.87,-3.9,0.96,1.5,1.09,0.07,">1 nonsynonymous","T15C N24W S41Y T55Q I80A N92H N107Y",7
"lib1","SARS-CoV-2","ATAGCAAACAGATGTG",1,27.08,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L38W D97N L131P",3
"lib1","SARS-CoV-2","ATAGCAAAGAAATATG",4,39.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G83I P96K T170M",3
"lib1","SARS-CoV-2","ATAGCAAAGACGCCTA",2,24.46,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N4C Y35E L57M V103W",4
"lib1","SARS-CoV-2","ATAGCAAATCTAACAA",4,34.47,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","W23K G146K C158F",3
"lib1","SARS-CoV-2","ATAGCAAATGAGACTT",6,122.73,8.65,-2.11,0.1,2.88,1.05,0.01,">1 nonsynonymous","S36E Y175Q",2
"lib1","SARS-CoV-2","ATAGCAAATGCAAGTG",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V S41K S45F G155P E186S K198N",6
"lib1","SARS-CoV-2","ATAGCAACCTGCGCCG",3,29.64,8.55,-2.21,0.31,1.5,1.17,0.03,">1 nonsynonymous","S45C D90T D97R",3
"lib1","SARS-CoV-2","ATAGCAACCTTAGTCC",8,352.31,8.26,-2.5,0.14,2.37,1.1,0.01,">1 nonsynonymous","F8W R16S V37R D97F Y175C",5
"lib1","SARS-CoV-2","ATAGCAACGCGAGCAA",3,25.73,6.1,-4.67,0.67,1.5,1.06,0.03,">1 nonsynonymous","I28P L57M P82T G83D G155L P191N",6
"lib1","SARS-CoV-2","ATAGCAACTTACCGAA",1,17.19,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","L5C S29I Y93N T100Y Y165T",5
"lib1","SARS-CoV-2","ATAGCAAGGACAAACA",1,16.89,7.02,-3.74,0.41,1.5,1.03,0.05,">1 nonsynonymous","V20K G166W",2
"lib1","SARS-CoV-2","ATAGCAATCTCAAAAG",1,11.14,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9E N92M S129I G155D",4
"lib1","SARS-CoV-2","ATAGCAATCTCAAGCA",4,127.9,10.66,-0.11,0.06,2.87,1.06,0,">1 nonsynonymous","N4G Q144R",2
"lib1","SARS-CoV-2","ATAGCAATGTGCTAAA",4,53.22,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A89V Y119F Y143T",3
"lib1","SARS-CoV-2","ATAGCACAAATTTACA",4,26.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S19A T85Y D90N Y123V Y175S",5
"lib1","SARS-CoV-2","ATAGCACAAGCCTACG",5,97.34,9.52,-1.25,0.07,2,1.04,0,">1 nonsynonymous","N4A A14C N58L",3
"lib1","SARS-CoV-2","ATAGCACATCTCAAAG",4,40.23,7.7,-3.06,0.41,1.5,1.02,0.06,">1 nonsynonymous","V11D L57E K87S",3
"lib1","SARS-CoV-2","ATAGCACTATCATCAA",3,765.97,10.69,-0.08,0.04,2.93,1.04,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","ATAGCACTGACTACTA",2,13.49,8.17,-2.6,0.28,2.06,1.16,0.03,">1 nonsynonymous","S129N Q144N Y175E T201R",4
"lib1","SARS-CoV-2","ATAGCACTGGTAGTCA",6,44.62,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G9S V77S P161F",3
"lib1","SARS-CoV-2","ATAGCACTGTTGGATA",1,30.18,10.57,-0.2,0.06,2.89,1.07,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","ATAGCACTTAAAAATG",5,81.14,10.43,-0.33,0.04,2.92,1.01,0,">1 nonsynonymous","C61V D90M N120S",3
"lib1","SARS-CoV-2","ATAGCAGAACTTTCAT",5,104.61,10.56,-0.2,0.05,2.95,1.01,0,">1 nonsynonymous","S19H K198N",2
"lib1","SARS-CoV-2","ATAGCAGAATAAGTGC",3,20.1,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N13C S19Q P96S Y119K",4
"lib1","SARS-CoV-2","ATAGCAGATCCTCAAG",3,7.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41K N92H P149S",3
"lib1","SARS-CoV-2","ATAGCAGCAATAAGAT",10,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36C S200V",2
"lib1","SARS-CoV-2","ATAGCAGCTATGAATT",5,62,8.56,-2.2,0.12,2.03,1.1,0.01,">1 nonsynonymous","Y35K K87H N118C",3
"lib1","SARS-CoV-2","ATAGCAGGCGCAACAT",6,54.44,10.59,-0.17,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGCATACCTTGAGA",3,15.56,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6V V52H T85M V103T S113L",5
"lib1","SARS-CoV-2","ATAGCATATGATTAAT",3,69.1,10.7,-0.06,0.06,2.88,1.09,0,"1 nonsynonymous","K128G",1
"lib1","SARS-CoV-2","ATAGCATATTCCCATC",1,7.5,8.84,-1.92,0.36,1.5,1,0.03,">1 nonsynonymous","L5V V103C",2
"lib1","SARS-CoV-2","ATAGCATATTTGACAG",3,36.99,10.74,-0.03,0.08,2.94,1.02,0,"1 nonsynonymous","A18Y",1
"lib1","SARS-CoV-2","ATAGCATCACATGATT",1,16.46,9.75,-1.01,0.11,2.83,1.14,0.01,">1 nonsynonymous","T148L T170R",2
"lib1","SARS-CoV-2","ATAGCATGAAAAACTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T3*",1
"lib1","SARS-CoV-2","ATAGCATGATAAGTGG",1,32.34,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25C S36L L60K Q84S Y119M I138M",6
"lib1","SARS-CoV-2","ATAGCATTAATATAAG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","P54* G117W K199F",3
"lib1","SARS-CoV-2","ATAGCATTATATTGTA",2,0.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","ATAGCATTCTGACGTT",2,14.62,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","Q84R F99T",2
"lib1","SARS-CoV-2","ATAGCATTTGAAAAAG",4,29.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K94F Y119T P149K Y165D",4
"lib1","SARS-CoV-2","ATAGCATTTGTTGTCA",4,14.22,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","E10V T15R D90G Y121S C158F",5
"lib1","SARS-CoV-2","ATAGCCAAGCTTTGAA",8,223.84,10.71,-0.05,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGCCAATACAATTA",2,13.82,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D34A F47L Y50S K87H L95S",5
"lib1","SARS-CoV-2","ATAGCCACCAGTATAA",9,4.46,NA,NA,NA,NA,NA,NA,"stop","P7* I104T C158K",3
"lib1","SARS-CoV-2","ATAGCCACGGAATATA",2,49.31,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","Y35C Y50N V115K",3
"lib1","SARS-CoV-2","ATAGCCAGAGTTCAAG",6,25.33,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y35N V103D",2
"lib1","SARS-CoV-2","ATAGCCAGATGAACAC",5,45.41,9.55,-1.22,0.15,1.78,1.16,0.01,">1 nonsynonymous","K48L D59A Y66F L162M V173I",5
"lib1","SARS-CoV-2","ATAGCCGACCATGCAA",9,139.21,6,-4.76,1.63,1.5,1.27,0.02,">1 nonsynonymous","G9Y Y35S G51K L60V D98H",5
"lib1","SARS-CoV-2","ATAGCCGAGAATTAAC",2,59.26,9.63,-1.13,0.15,1.82,1.1,0.01,">1 nonsynonymous","D90K S139F",2
"lib1","SARS-CoV-2","ATAGCCGATTCGGTGT",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L D34A A89S S129D P161E",5
"lib1","SARS-CoV-2","ATAGCCGATTCTGGAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","L60S V65R Y93*",3
"lib1","SARS-CoV-2","ATAGCCGCGACGATTA",2,32.87,10.53,-0.24,0.07,2.92,1,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","ATAGCCGCTAACTGAA",6,88.78,8.7,-2.07,0.19,1.5,1.13,0.01,">1 nonsynonymous","F62Y W106Q G152C",3
"lib1","SARS-CoV-2","ATAGCCGGCCGAGAAA",2,30.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10A K56S N92S S113G R136I F156Q",6
"lib1","SARS-CoV-2","ATAGCCTAGGGACCCA",8,253.23,9.98,-0.78,0.05,2.82,1.02,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","ATAGCCTCAATAAAAA",2,17.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A18V R25K R73F L95N Y119Q A190S",6
"lib1","SARS-CoV-2","ATAGCCTCCATATGGC",2,32.13,10.34,-0.42,0.06,2.67,1.02,0,">1 nonsynonymous","K26V D34T",2
"lib1","SARS-CoV-2","ATAGCCTTCACTCGAT",4,18.74,6.16,-4.61,1.26,1.5,1.14,0.05,">1 nonsynonymous","N1I D34T G86Y",3
"lib1","SARS-CoV-2","ATAGCGAATTAGAGAA",4,13.42,6,-4.76,2,3,1.05,0,">1 nonsynonymous","N13G N92L",2
"lib1","SARS-CoV-2","ATAGCGACGAGAACGT",4,27.47,10.03,-0.74,0.2,2.14,1.13,0.01,">1 nonsynonymous","T46M C61Q F99W N109K T140W T148R",6
"lib1","SARS-CoV-2","ATAGCGAGAACGAATA",9,326.56,9.5,-1.26,0.06,2.65,1.09,0,"1 nonsynonymous","N118W",1
"lib1","SARS-CoV-2","ATAGCGAGATAACCCC",3,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146W A190V",2
"lib1","SARS-CoV-2","ATAGCGAGGAAACGTG",3,60,10.24,-0.52,0.07,2.85,1.06,0,">1 nonsynonymous","N40F F160P",2
"lib1","SARS-CoV-2","ATAGCGATATTATGAT",2,1.44,NA,NA,NA,NA,NA,NA,"stop","S19* G172F",2
"lib1","SARS-CoV-2","ATAGCGATTTGTGTTA",3,43.89,10.73,-0.04,0.06,2.95,1.04,0,"1 nonsynonymous","N130E",1
"lib1","SARS-CoV-2","ATAGCGCAATTTCCAG",1,42.73,9.68,-1.09,0.09,2.78,1.01,0,">1 nonsynonymous","Y39V V153P Y178N",3
"lib1","SARS-CoV-2","ATAGCGCAGATACAAG",4,21.16,8.27,-2.5,0.32,1.77,1.11,0.05,">1 nonsynonymous","D112H T148Q",2
"lib1","SARS-CoV-2","ATAGCGCATAGACAAA",1,34.88,10.66,-0.11,0.08,2.93,1.05,0,">1 nonsynonymous","Q84G L95V",2
"lib1","SARS-CoV-2","ATAGCGCCAGAGTTTC",2,24.75,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14F Y35W S139L N171W S184P",5
"lib1","SARS-CoV-2","ATAGCGCGGATACGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","F8G K94A I142L T148R Y175*",5
"lib1","SARS-CoV-2","ATAGCGCTAAAGAGAT",1,15.7,10.74,-0.03,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGCGCTGGACACAT",2,6.68,10.92,0.16,2,2.8,1.12,0.04,"1 nonsynonymous","F156P",1
"lib1","SARS-CoV-2","ATAGCGCTTCACACAA",4,119.79,10.17,-0.6,0.07,2.53,1.05,0,">1 nonsynonymous","R16L K48L H189L",3
"lib1","SARS-CoV-2","ATAGCGGGCGTGGAAA",2,23.92,10.74,-0.03,0.08,2.97,1,0,"1 nonsynonymous","N151P",1
"lib1","SARS-CoV-2","ATAGCGGGGATTCCTT",1,46.22,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","T85L R124P I138T",3
"lib1","SARS-CoV-2","ATAGCGTACTATGCAA",12,81.46,7.27,-3.49,0.24,1.5,1.13,0.02,">1 nonsynonymous","S69R Q144L P149Q",3
"lib1","SARS-CoV-2","ATAGCGTTCGGGTTAA",2,3.28,NA,NA,NA,NA,NA,NA,"stop","V65* K87L P133M",3
"lib1","SARS-CoV-2","ATAGCGTTGCAAAAAA",2,4.53,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","ATAGCTAAAACATACA",6,36.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60H R136W C158A P197A",4
"lib1","SARS-CoV-2","ATAGCTAAAAGGTGAT",9,96.16,10.67,-0.1,0.05,2.88,1.08,0,"1 nonsynonymous","N64K",1
"lib1","SARS-CoV-2","ATAGCTAAATATTTTT",2,46.17,10.78,0.02,0.05,2.88,1.03,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","ATAGCTAACAAGATTG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","I104F A192*",2
"lib1","SARS-CoV-2","ATAGCTAACAATAGAT",3,22.37,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R73E P161Y",2
"lib1","SARS-CoV-2","ATAGCTAACTAATTGT",1,38.22,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R16I L95Y",2
"lib1","SARS-CoV-2","ATAGCTAATGTAGCAT",1,13.98,10.16,-0.6,0.14,2.59,1.02,0.01,">1 nonsynonymous","Y91K S129A",2
"lib1","SARS-CoV-2","ATAGCTACAAATTACT",2,7.76,10.8,0.03,0.22,2.63,1.13,0.02,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","ATAGCTACGTTGCGTA",5,36.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25S L60S R136N",3
"lib1","SARS-CoV-2","ATAGCTAGCCGTTTAT",6,160.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N40G N64F N157I",3
"lib1","SARS-CoV-2","ATAGCTAGCGTGAAAG",1,29.04,9.4,-1.36,0.07,2.84,1.05,0,">1 nonsynonymous","G9A Y91N N157D",3
"lib1","SARS-CoV-2","ATAGCTAGGATATCAT",1,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","ATAGCTAGTATCTTTA",4,2.4,NA,NA,NA,NA,NA,NA,"stop","V32* C61F G117D T148S",4
"lib1","SARS-CoV-2","ATAGCTCATGGGTACA",7,108.65,6,-4.76,1.98,1.5,1.15,0.01,">1 nonsynonymous","V37W F70E N107G S139V N151I",5
"lib1","SARS-CoV-2","ATAGCTCCAAGGTGAT",1,35.36,10.4,-0.36,0.08,2.88,1,0,">1 nonsynonymous","S69M L122F",2
"lib1","SARS-CoV-2","ATAGCTCCCAACAAAA",1,9.74,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V37R Q84M A89Q N118G S129D I142T",6
"lib1","SARS-CoV-2","ATAGCTCCCAGCCAAA",5,64.25,7.97,-2.8,0.23,1.5,1.12,0.01,">1 nonsynonymous","K48E R127D",2
"lib1","SARS-CoV-2","ATAGCTCCCATAATTG",6,196.81,10.81,0.04,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGCTCCTAACTCTT",1,9.78,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","L5Q N107E P161M T201Q",4
"lib1","SARS-CoV-2","ATAGCTCTATTGTGAC",1,1.81,NA,NA,NA,NA,NA,NA,"stop","N92* Y119S",2
"lib1","SARS-CoV-2","ATAGCTGACAATTATT",3,13.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99K P177R",2
"lib1","SARS-CoV-2","ATAGCTGCCAACTCCT",7,134.93,10.76,-0.01,0.04,2.94,1.02,0,">1 nonsynonymous","R16L E154S",2
"lib1","SARS-CoV-2","ATAGCTGCCCAGTACC",11,3.77,NA,NA,NA,NA,NA,NA,"stop","T63Y E154D T201*",3
"lib1","SARS-CoV-2","ATAGCTGTGGTCATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5S S69F N92V N120G S147*",5
"lib1","SARS-CoV-2","ATAGCTTAATACCTAG",4,20.91,9.81,-0.96,0.12,2.31,1.05,0.01,">1 nonsynonymous","T15F T140I",2
"lib1","SARS-CoV-2","ATAGCTTAATAGAATA",3,43.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86E G166R",2
"lib1","SARS-CoV-2","ATAGCTTCAAATAGGA",1,16.17,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","C49L E76A L95P K128T",4
"lib1","SARS-CoV-2","ATAGGAAAAAATTCCA",11,67.64,6,-4.76,1.96,1.5,1.25,0.03,">1 nonsynonymous","D59L G152F Y165F",3
"lib1","SARS-CoV-2","ATAGGAAAATCAGGGG",8,43.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4E V103N R136W N157Y",4
"lib1","SARS-CoV-2","ATAGGAAACAATAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","K128C E135* T170S",3
"lib1","SARS-CoV-2","ATAGGAAATAGATGCT",2,1.1,NA,NA,NA,NA,NA,NA,"stop","R16S L95W D98T Y175I K198*",5
"lib1","SARS-CoV-2","ATAGGAACAATTGTAG",6,63.12,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","V52I N64K G86H D97C G152N",5
"lib1","SARS-CoV-2","ATAGGAACACACATAT",1,20.84,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","L5R E10T V77F C158L",4
"lib1","SARS-CoV-2","ATAGGAACATAGTAGA",5,27.58,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I104Q D112E P177T",3
"lib1","SARS-CoV-2","ATAGGAACATGCCATT",1,2.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","ATAGGAACCAATTCTT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","D59F P96G P169*",3
"lib1","SARS-CoV-2","ATAGGAACCAGTTAAC",8,2.13,NA,NA,NA,NA,NA,NA,"stop","D59L G86* V103C Y121N K132N",5
"lib1","SARS-CoV-2","ATAGGAACCTCCATGC",1,10.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P7T L95A V103Q Y119N F126A Q144V P149I V182T",8
"lib1","SARS-CoV-2","ATAGGAACGACCTCTG",3,15.69,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22P P96R",2
"lib1","SARS-CoV-2","ATAGGAACGGCGTCTG",4,39.39,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R27Y G83I W106L F156R",4
"lib1","SARS-CoV-2","ATAGGAACTAACAGTA",5,45.24,10.41,-0.35,0.06,2.84,1.09,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","ATAGGAAGCTGATCTG",5,60.44,8.65,-2.11,0.07,2.75,1.08,0,">1 nonsynonymous","S43N K56S N157T",3
"lib1","SARS-CoV-2","ATAGGAATAAGAGATT",9,66.64,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V32H K56F R127M",3
"lib1","SARS-CoV-2","ATAGGAATACACGTCC",6,14.21,6.14,-4.62,0.7,1.5,1.06,0.02,">1 nonsynonymous","V11G K87M K94G F160N P197Q",5
"lib1","SARS-CoV-2","ATAGGAATCAAGGTTA",4,40.1,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","ATAGGAATCTGAAGGC",1,115.63,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E154N Y159T",2
"lib1","SARS-CoV-2","ATAGGAATGTCACTAG",1,34.76,9.89,-0.87,0.09,2.43,1.02,0,">1 nonsynonymous","C31H L60C",2
"lib1","SARS-CoV-2","ATAGGAATTAAACTAA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","T46E D59W G101N N110*",4
"lib1","SARS-CoV-2","ATAGGAATTCTTAAGA",4,27.35,7.61,-3.16,0.38,1.5,1.11,0.04,">1 nonsynonymous","G9K V77W A192T",3
"lib1","SARS-CoV-2","ATAGGAATTTGCAACT",2,14.16,9.07,-1.7,0.16,2.59,1.17,0.01,">1 nonsynonymous","T63F I142A",2
"lib1","SARS-CoV-2","ATAGGACAATCCCTAA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","N4H P54C P96Q G146* Y159V",5
"lib1","SARS-CoV-2","ATAGGACACCCTGTTC",6,59.62,6.33,-4.44,0.45,1.62,1.2,0.01,">1 nonsynonymous","S69K P82L T100N G117R F126C N151W Y175V",7
"lib1","SARS-CoV-2","ATAGGACACTGAGAAT",18,306.67,10.14,-0.62,0.07,2.47,1.01,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","ATAGGACCCCCGAAGC",1,37.45,8.12,-2.65,0.33,1.57,1.11,0.04,">1 nonsynonymous","C6S A33F L125C R136C",4
"lib1","SARS-CoV-2","ATAGGACGAGTTACAG",1,35.91,10.17,-0.59,0.08,2.31,1.02,0,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","ATAGGAGACCCACCTT",4,112.46,10.04,-0.73,0.06,2.88,1.03,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","ATAGGAGAGTAGAACG",8,70.85,10.58,-0.18,0.07,2.85,1.06,0,">1 nonsynonymous","K56S F185Y T201D",3
"lib1","SARS-CoV-2","ATAGGAGAGTAGCATT",2,37.26,10.76,-0.01,0.07,2.92,1.04,0,">1 nonsynonymous","I2Y S41T",2
"lib1","SARS-CoV-2","ATAGGAGATTTACCAA",3,59.83,9.15,-1.62,0.07,2.81,1.1,0,">1 nonsynonymous","S147F E154Y",2
"lib1","SARS-CoV-2","ATAGGAGATTTGTCAC",6,55.98,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S29V Y35S D112N S129Q T201E",5
"lib1","SARS-CoV-2","ATAGGAGGCATTGAAT",3,8.34,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","P7R T46S T63Y A89W S113Y L125Y",6
"lib1","SARS-CoV-2","ATAGGAGGTCCACAAG",2,0.42,NA,NA,NA,NA,NA,NA,"stop","C49* T63C L95* K199T",4
"lib1","SARS-CoV-2","ATAGGAGTGCCGCTAA",1,17.55,8.44,-2.33,0.23,2.54,1.09,0.02,"1 nonsynonymous","N171D",1
"lib1","SARS-CoV-2","ATAGGATAAGAAAAGC",10,25.3,6,-4.76,1.19,3,1.07,0,">1 nonsynonymous","V103S D112G A192W",3
"lib1","SARS-CoV-2","ATAGGATAGAACAAAC",1,43.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T63R K87D I104L Y119Q I142F K199T",6
"lib1","SARS-CoV-2","ATAGGATATTAACTAC",1,61.45,9.79,-0.98,0.07,2.74,1.04,0,">1 nonsynonymous","V32R N118V",2
"lib1","SARS-CoV-2","ATAGGATCCACTAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y G101A",2
"lib1","SARS-CoV-2","ATAGGATCCCAGATAG",3,43.43,10.05,-0.72,0.05,2.89,1.01,0,">1 nonsynonymous","C6A T55S",2
"lib1","SARS-CoV-2","ATAGGATGGTCCAGGA",4,58.98,10.67,-0.1,0.08,2.94,1.04,0,"1 nonsynonymous","K132T",1
"lib1","SARS-CoV-2","ATAGGATGTACGGGAA",2,20.82,6.06,-4.71,1.49,1.5,1.17,0.03,">1 nonsynonymous","D59Y Y93W",2
"lib1","SARS-CoV-2","ATAGGATGTAGACTAA",5,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L K132R",2
"lib1","SARS-CoV-2","ATAGGATTAGCTGCTA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","P54* D68L Y123*",3
"lib1","SARS-CoV-2","ATAGGATTCCGAACCT",2,8.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I104V T140S C158I V180K",4
"lib1","SARS-CoV-2","ATAGGCAAAAGTGATA",2,16.87,9.48,-1.28,0.2,2.37,1.09,0.01,"1 nonsynonymous","Y165I",1
"lib1","SARS-CoV-2","ATAGGCAAAATCGCAT",1,27.35,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R27M V37E K48P V77P E154D F156S",6
"lib1","SARS-CoV-2","ATAGGCACAAACCTAC",4,42.76,7.67,-3.09,0.15,1.5,1.18,0.01,">1 nonsynonymous","L162Q T170K",2
"lib1","SARS-CoV-2","ATAGGCACGAACATTA",1,33.49,10.84,0.08,0.09,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGGCACGACCTATA",4,0.27,NA,NA,NA,NA,NA,NA,"stop","Y39* A89V L183V",3
"lib1","SARS-CoV-2","ATAGGCAGAAAGCTTA",2,87.09,9.19,-1.58,0.06,2.82,1.13,0,">1 nonsynonymous","L5R L125Y",2
"lib1","SARS-CoV-2","ATAGGCAGAACACACA",9,200.83,9.31,-1.45,0.05,2.88,1.06,0,">1 nonsynonymous","I2T Q168I K198S",3
"lib1","SARS-CoV-2","ATAGGCATAAATGGAG",4,47.1,8.49,-2.27,0.17,1.8,1.12,0.01,">1 nonsynonymous","F17L L60A K87C",3
"lib1","SARS-CoV-2","ATAGGCATTCAACAAA",2,39.45,10.6,-0.17,0.09,2.81,1.12,0,">1 nonsynonymous","K132E T201Q",2
"lib1","SARS-CoV-2","ATAGGCCAGCCAAAGT",4,28.6,10.54,-0.22,0.08,2.91,1.01,0,">1 nonsynonymous","N40H C61T D90N N120A",4
"lib1","SARS-CoV-2","ATAGGCCATCATCGAT",2,29.25,6.44,-4.33,0.57,1.5,1.22,0.03,">1 nonsynonymous","R127N R136F",2
"lib1","SARS-CoV-2","ATAGGCCCATAGAGAG",1,24.36,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","Y159S",1
"lib1","SARS-CoV-2","ATAGGCCCATATAATA",10,35.69,8.87,-1.89,0.12,1.5,1.12,0.01,">1 nonsynonymous","Y93L V153T",2
"lib1","SARS-CoV-2","ATAGGCCCTACAACGG",7,65.72,6,-4.76,2,3,1.18,0,">1 nonsynonymous","F99K T201M",2
"lib1","SARS-CoV-2","ATAGGCCTAAGTGACG",13,29.98,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D90S D97V V103N F160W",4
"lib1","SARS-CoV-2","ATAGGCCTAGAAACCA",3,78.57,9.85,-0.91,0.06,2.21,1.08,0,">1 nonsynonymous","N1V S41D G83V Y143H",4
"lib1","SARS-CoV-2","ATAGGCCTGCATTGGC",1,19.87,10.73,-0.03,0.09,2.95,1.02,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","ATAGGCCTGGGTGCGA",3,72.33,9.81,-0.95,0.05,2.89,1.05,0,">1 nonsynonymous","E10S L125C",2
"lib1","SARS-CoV-2","ATAGGCCTTAAGGTCT",2,57.77,10.82,0.06,0.08,2.88,1.09,0,"1 nonsynonymous","P197K",1
"lib1","SARS-CoV-2","ATAGGCCTTGCACATC",2,23.22,10.1,-0.66,0.18,2.32,1.05,0.01,">1 nonsynonymous","A33S G83W",2
"lib1","SARS-CoV-2","ATAGGCGAAAAAAACT",2,43.22,6.06,-4.71,1.28,1.5,1.2,0.03,">1 nonsynonymous","L38H G51V Q84E Y119L",4
"lib1","SARS-CoV-2","ATAGGCGACTTCAGTA",2,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E K56A T85V C102G T148P G152T Y165D",7
"lib1","SARS-CoV-2","ATAGGCGCTCCCGAAT",8,37.12,6,-4.76,1.17,1.62,1.28,0.03,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","ATAGGCGGTCAAATTA",1,15.08,10.15,-0.61,0.1,2.83,1,0,">1 nonsynonymous","G9H S45I",2
"lib1","SARS-CoV-2","ATAGGCTAATGGAGTG",2,97.09,8.43,-2.33,0.18,2,1.1,0.01,">1 nonsynonymous","A22V F126Q",2
"lib1","SARS-CoV-2","ATAGGGAAAGAAAATT",1,14.75,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A89L S147I C150H L187D",4
"lib1","SARS-CoV-2","ATAGGGAATTACATTC",3,23.38,7.33,-3.44,0.35,1.5,1.1,0.04,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","ATAGGGACAACTGACA",2,20.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N13F K94S F99L G116L T148I",5
"lib1","SARS-CoV-2","ATAGGGACTTCCGAAC",10,1.02,NA,NA,NA,NA,NA,NA,"stop","F12Q V37W K87R D112E Y119* S147P",6
"lib1","SARS-CoV-2","ATAGGGAGTGCCTGAC",3,89.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L L38S Y119E K128L F156L",5
"lib1","SARS-CoV-2","ATAGGGAGTGTTTTAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46R S69A L95M P177T",4
"lib1","SARS-CoV-2","ATAGGGATGCACCAAG",4,103.67,10.82,0.06,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGGGATGCCAAGTT",8,80.21,8.37,-2.4,0.18,2.27,1.2,0.01,">1 nonsynonymous","N157V K198G",2
"lib1","SARS-CoV-2","ATAGGGATGTTGTAAC",5,39.86,7.91,-2.85,0.23,1.5,1.17,0.02,">1 nonsynonymous","N40K V103L",2
"lib1","SARS-CoV-2","ATAGGGCTTAGTAACG",7,45.98,6.03,-4.74,1.27,1.5,1.32,0.03,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","ATAGGGGAACTGCTCA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","C6I K87G R127* F134E Q144R T201S",6
"lib1","SARS-CoV-2","ATAGGGGACCTAAAAC",8,3.51,NA,NA,NA,NA,NA,NA,"stop","Y35I G51* C61N",3
"lib1","SARS-CoV-2","ATAGGGGAGAATTCAA",7,185.29,8.81,-1.95,0.07,2.88,1.05,0,">1 nonsynonymous","G117V T170S",2
"lib1","SARS-CoV-2","ATAGGGGCTATTTGCG",9,2.97,NA,NA,NA,NA,NA,NA,"stop","C49M S69M F167*",3
"lib1","SARS-CoV-2","ATAGGGGCTTCGTCTC",2,78.48,10.84,0.08,0.09,2.8,1.11,0,"1 nonsynonymous","L5M",1
"lib1","SARS-CoV-2","ATAGGGGGTTACCTTT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib1","SARS-CoV-2","ATAGGGTCATCACAAA",14,114.07,10.68,-0.09,0.03,2.93,1.02,0,">1 nonsynonymous","P54W C61S",2
"lib1","SARS-CoV-2","ATAGGGTCGCAGCTCA",18,269.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9S R16F Q84K F99V Y119N Y178V",6
"lib1","SARS-CoV-2","ATAGGGTGATTGTGAA",1,15.96,10.96,0.2,0.14,2.99,1,0.01,">1 nonsynonymous","R27L I138T",2
"lib1","SARS-CoV-2","ATAGGTAAATGACGCG",12,95.44,6.44,-4.32,0.39,1.5,1.17,0.01,">1 nonsynonymous","Y21L I142V F167E",3
"lib1","SARS-CoV-2","ATAGGTAACATAAGCA",8,50.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10R K48A W106E F134Q Y143V",5
"lib1","SARS-CoV-2","ATAGGTAACCCTTTTC",2,39.57,10.76,-0.01,0.08,2.84,1.13,0,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","ATAGGTAAGTTTAGTT",3,15.84,10.1,-0.66,0.15,2.39,1,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","ATAGGTACAAAAACTG",2,20.56,7.07,-3.7,0.58,1.5,1.1,0.07,">1 nonsynonymous","A105R Q144L",2
"lib1","SARS-CoV-2","ATAGGTACTTAACAAA",3,67.63,10.62,-0.14,0.06,2.94,1.05,0,">1 nonsynonymous","Y121F K198Q",2
"lib1","SARS-CoV-2","ATAGGTACTTACCCAA",3,43.05,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","A33R P82G",2
"lib1","SARS-CoV-2","ATAGGTAGAATACATT",4,47.42,9.51,-1.26,0.2,1.77,1.16,0.02,">1 nonsynonymous","L38I W106V G152D",3
"lib1","SARS-CoV-2","ATAGGTAGCAAAGACA",3,30.98,10.51,-0.26,0.05,2.97,1.02,0,">1 nonsynonymous","S53Y N110Q",2
"lib1","SARS-CoV-2","ATAGGTATGATACAAG",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L G86R K128V",3
"lib1","SARS-CoV-2","ATAGGTATGCAGGCGA",3,51.17,10.29,-0.48,0.07,2.78,1,0,"1 nonsynonymous","F185V",1
"lib1","SARS-CoV-2","ATAGGTCAAAAAAAAA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","G146T N151T F156C F167G T201*",5
"lib1","SARS-CoV-2","ATAGGTCAAAATCTAG",8,65.48,10.55,-0.21,0.05,2.94,1,0,">1 nonsynonymous","T63L K87R",2
"lib1","SARS-CoV-2","ATAGGTCAAATGGCAA",1,1.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20E",1
"lib1","SARS-CoV-2","ATAGGTCAATAACAAT",2,32.16,10.79,0.03,0.07,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATAGGTCACAACATCA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","W23* D59E G101Y",3
"lib1","SARS-CoV-2","ATAGGTCACAACTTTC",4,42.87,9.84,-0.93,0.08,2.82,1.11,0,">1 nonsynonymous","N58S K87D P197V",3
"lib1","SARS-CoV-2","ATAGGTCAGGCCTGAA",1,14.73,9.39,-1.37,0.18,1.82,1.07,0.02,">1 nonsynonymous","N130Q D137H",2
"lib1","SARS-CoV-2","ATAGGTCATACAAAAT",7,48.67,10.74,-0.02,0.06,2.94,1.03,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","ATAGGTCCATCACAGA",1,103.6,10.81,0.05,0.05,2.88,1.05,0,">1 nonsynonymous","T140K F160A",2
"lib1","SARS-CoV-2","ATAGGTCTAACACACT",14,119.21,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34S N64C A89L L95G T100F",5
"lib1","SARS-CoV-2","ATAGGTGATTAATGAC",2,0.94,NA,NA,NA,NA,NA,NA,"stop","S45R K94* L131*",3
"lib1","SARS-CoV-2","ATAGGTGCGAGCAGAT",4,61.51,10.77,0,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGGTGTAAAATCAG",1,9.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128G T201A",2
"lib1","SARS-CoV-2","ATAGGTGTATTTATGA",4,23.73,9.59,-1.17,0.21,1.8,1.1,0.02,">1 nonsynonymous","V103Y C150K S200P",3
"lib1","SARS-CoV-2","ATAGGTGTTTCACTGT",9,169.04,10.75,-0.02,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGGTTACATTATAC",2,17.38,6.26,-4.5,0.75,1.5,1.16,0.02,">1 nonsynonymous","F12E N107G K199S",3
"lib1","SARS-CoV-2","ATAGGTTAGACTCAGG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","S19R G86* I104F P149M",4
"lib1","SARS-CoV-2","ATAGGTTCCGAATAAC",9,65.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14N D112T Y119E",3
"lib1","SARS-CoV-2","ATAGGTTCTGCTGGCC",1,43.29,10.85,0.08,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGGTTTAAGGTTAT",13,115.88,9.04,-1.73,0.17,1.59,1.17,0.01,">1 nonsynonymous","F44L C61Q K94S",3
"lib1","SARS-CoV-2","ATAGGTTTTCAGACCT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","A33K T63*",2
"lib1","SARS-CoV-2","ATAGGTTTTCGATAAT",6,1.01,NA,NA,NA,NA,NA,NA,"stop","N107* L131Q E154Y V173W",4
"lib1","SARS-CoV-2","ATAGTAAAAAACCATA",3,36.31,6.7,-4.06,0.35,1.5,1.15,0.02,">1 nonsynonymous","A22G Y39L G146L",3
"lib1","SARS-CoV-2","ATAGTAAAAATCCCCG",6,3.49,NA,NA,NA,NA,NA,NA,"stop","W23M N107* C158Y",3
"lib1","SARS-CoV-2","ATAGTAAAATTGAAAA",4,34,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I28T P82K T100E N118R K132A",5
"lib1","SARS-CoV-2","ATAGTAAAGACTCTTC",1,9.35,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","W106C N157T",2
"lib1","SARS-CoV-2","ATAGTAAAGTCATTGC",13,59.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T100G R124S L131H T201L",4
"lib1","SARS-CoV-2","ATAGTAAATAATTACA",4,24.47,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E10S S41P Y91A I104V D112N",5
"lib1","SARS-CoV-2","ATAGTAAATACAAGAT",7,70.69,10.77,0,0.06,2.9,1.05,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","ATAGTAAATATACTTT",2,32.14,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C102Y F160P Q176A",3
"lib1","SARS-CoV-2","ATAGTAAATCAACCTT",3,7.66,10.31,-0.45,0.13,2.94,1,0.01,">1 nonsynonymous","G9T N151A G166N",3
"lib1","SARS-CoV-2","ATAGTAAATCACGGCG",10,156.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T85C Y93C Q176V",3
"lib1","SARS-CoV-2","ATAGTAAATCTAAGTA",4,24,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6S I88R A105S",3
"lib1","SARS-CoV-2","ATAGTAAATTACTCAA",3,55.27,8.67,-2.1,0.12,2.4,1.09,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","ATAGTAAATTGCATCG",10,64.5,6,-4.76,1.49,3,1.22,0,">1 nonsynonymous","F17L N58P G86M D97V V103H",5
"lib1","SARS-CoV-2","ATAGTAACACGGGATA",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77W L183P",2
"lib1","SARS-CoV-2","ATAGTAACACTATTAA",6,126.49,9.69,-1.07,0.08,1.98,1.1,0,">1 nonsynonymous","V37F K48F L95C",3
"lib1","SARS-CoV-2","ATAGTAACCAAAAACA",5,34.33,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P82M F99L W106M K198R",4
"lib1","SARS-CoV-2","ATAGTAACTCCGCAGA",4,30.47,8.54,-2.23,0.24,1.5,1.06,0.03,">1 nonsynonymous","A42V P96Q F185W",3
"lib1","SARS-CoV-2","ATAGTAACTTAGCGTT",5,167.29,9.6,-1.17,0.1,2.49,1.09,0,">1 nonsynonymous","R16K T85M N107Q",3
"lib1","SARS-CoV-2","ATAGTAAGAAATCGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36G K87I Y119V N157*",4
"lib1","SARS-CoV-2","ATAGTAAGATTACTCG",4,44.94,8.3,-2.46,0.12,2.27,1.01,0.01,">1 nonsynonymous","Y143L G174V",2
"lib1","SARS-CoV-2","ATAGTAATAATAGGAC",9,98.92,10.63,-0.13,0.05,2.85,1.06,0,"1 nonsynonymous","E141L",1
"lib1","SARS-CoV-2","ATAGTAATACGTTCCG",5,59.3,10.79,0.03,0.08,2.97,1,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","ATAGTAATAGTGGAGT",3,38.64,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N107P K114V Y143K Q168L P197A",5
"lib1","SARS-CoV-2","ATAGTAATATCTATCG",3,50.55,10,-0.76,0.12,2.32,1.07,0.01,">1 nonsynonymous","P54T N64T F134K A192L",4
"lib1","SARS-CoV-2","ATAGTACAGACTCAAC",10,63.59,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F12Y S19R V37G Q168L",4
"lib1","SARS-CoV-2","ATAGTACCAGAGTTCC",8,196.9,10.74,-0.02,0.05,2.95,1.01,0,">1 nonsynonymous","Q84T Y91F",2
"lib1","SARS-CoV-2","ATAGTACCCCCTGTAA",1,68.65,7.89,-2.87,0.27,1.5,1.13,0.02,">1 nonsynonymous","R136K P161M",2
"lib1","SARS-CoV-2","ATAGTACCCTACGGTT",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V103R F134S",3
"lib1","SARS-CoV-2","ATAGTACCTAGAACTT",4,73.57,10.64,-0.12,0.09,2.86,1.1,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","ATAGTACGATTGCGAC",1,0.51,NA,NA,NA,NA,NA,NA,"stop","R27E Y35V F44Q G86D D97* K132T",6
"lib1","SARS-CoV-2","ATAGTACGCTTTAGTT",2,5.89,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T85G D90F G117D Y143A",4
"lib1","SARS-CoV-2","ATAGTACGTACCAGAC",1,18.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P N13P S36L F70M I88Y Y121C",6
"lib1","SARS-CoV-2","ATAGTACTAGTTAAAG",2,0.56,NA,NA,NA,NA,NA,NA,"stop","R27* F47I Q84L F126L",4
"lib1","SARS-CoV-2","ATAGTACTCAAATACA",1,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S F134L",2
"lib1","SARS-CoV-2","ATAGTAGAAAGAGTTG",3,29.1,8.98,-1.79,0.13,1.97,1.13,0.01,">1 nonsynonymous","C6Y D90W",2
"lib1","SARS-CoV-2","ATAGTAGCATGAAAAT",2,43.21,10.64,-0.13,0.04,2.89,1.03,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","ATAGTAGCATTTCACC",2,26.23,10.25,-0.52,0.09,2.82,1.02,0,">1 nonsynonymous","N13L V153S",2
"lib1","SARS-CoV-2","ATAGTAGCTTGTCCCC",6,106.89,10.14,-0.62,0.08,2.57,1.02,0,">1 nonsynonymous","N1Y N24C",2
"lib1","SARS-CoV-2","ATAGTAGTAAAAGAAT",4,32.64,9.9,-0.86,0.12,2.6,1.02,0.01,">1 nonsynonymous","T55R T100I P133I",3
"lib1","SARS-CoV-2","ATAGTAGTATGATATG",4,41.91,7.59,-3.18,0.21,1.5,1.16,0.02,">1 nonsynonymous","F62L N107G N118H",3
"lib1","SARS-CoV-2","ATAGTAGTCAGAAAAT",1,11.42,6,-4.76,2,3,1.04,0,">1 nonsynonymous","D97Y E135L G155K Y178L",4
"lib1","SARS-CoV-2","ATAGTATAACGCGAAT",1,23.32,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","R25C G51M C61Y A105L G174L F185S",6
"lib1","SARS-CoV-2","ATAGTATATATAATGA",1,13.59,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12E S41E K48C D112V Y178T",5
"lib1","SARS-CoV-2","ATAGTATATGCAGGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","ATAGTATATTTTCCAA",3,26.67,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E76A N92Y Y119C",3
"lib1","SARS-CoV-2","ATAGTATCATAGAACT",1,8.99,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L5G T15C Y39K P54H Y91T",5
"lib1","SARS-CoV-2","ATAGTATCTATGTAAC",5,44.69,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C6Y V37S V103Y P169L",4
"lib1","SARS-CoV-2","ATAGTATCTCCTTGCC",12,238.25,9.27,-1.49,0.07,2.85,1.1,0,">1 nonsynonymous","V37T N120P",2
"lib1","SARS-CoV-2","ATAGTATCTCGAGTCT",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V Y66A I104N",3
"lib1","SARS-CoV-2","ATAGTATCTCTGAAAA",1,13.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44R L57P G83V I88E",4
"lib1","SARS-CoV-2","ATAGTATGAAACGACA",6,62.28,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2S P54T G83A L95W",4
"lib1","SARS-CoV-2","ATAGTATGCATATGAC",9,87.82,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","C6L Y91H G117N G174Q",4
"lib1","SARS-CoV-2","ATAGTATGTCAAACCG",6,47.51,10.22,-0.54,0.05,2.89,1.03,0,">1 nonsynonymous","V37F G83E N107S",3
"lib1","SARS-CoV-2","ATAGTATTAAAACATA",1,8.76,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12W V103L N157Y G166A",4
"lib1","SARS-CoV-2","ATAGTATTCCAACGCA",4,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D T46R D97L",3
"lib1","SARS-CoV-2","ATAGTCAAATGATATT",5,8.66,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","F47V G86D T100S G146F V173Y",5
"lib1","SARS-CoV-2","ATAGTCAACAATAAAG",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R P82N D90P L187H",4
"lib1","SARS-CoV-2","ATAGTCAACGAGCAAT",1,1.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118I",1
"lib1","SARS-CoV-2","ATAGTCAATGGTTTGC",3,13.08,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C31S I88K D97N S147Y",4
"lib1","SARS-CoV-2","ATAGTCACATCGTTTC",2,27.57,9.94,-0.82,0.2,1.93,1.13,0.02,">1 nonsynonymous","A14D S45Y N120A T201R",4
"lib1","SARS-CoV-2","ATAGTCACGCTATTAA",1,25.88,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S29I S113E R136Y",3
"lib1","SARS-CoV-2","ATAGTCAGGTGTCAAT",2,59.61,10.32,-0.44,0.08,2.85,1.02,0,">1 nonsynonymous","Y91A Y175W",2
"lib1","SARS-CoV-2","ATAGTCATCTAATACC",1,40.01,10.65,-0.11,0.06,2.85,1.05,0,">1 nonsynonymous","T85S T140I",2
"lib1","SARS-CoV-2","ATAGTCCAAAATCGAC",4,0,NA,NA,NA,NA,NA,NA,"stop","P7* R27L L38A G155S",4
"lib1","SARS-CoV-2","ATAGTCCAAACCTCAA",7,5.01,NA,NA,NA,NA,NA,NA,"stop","D34V T46F A105N S184*",4
"lib1","SARS-CoV-2","ATAGTCCAACTAACAG",2,29.19,8.31,-2.45,0.22,2.15,1.16,0.02,">1 nonsynonymous","N120L Y175S",2
"lib1","SARS-CoV-2","ATAGTCCGCGACCGCG",3,0.55,NA,NA,NA,NA,NA,NA,"stop","G86E K128* P177H",3
"lib1","SARS-CoV-2","ATAGTCCTAATTCCGC",6,91.02,10.7,-0.06,0.07,2.82,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGTCGACCGTTTAA",1,2.66,NA,NA,NA,NA,NA,NA,"stop","I2P Q176* G196L",3
"lib1","SARS-CoV-2","ATAGTCGATTACAAAA",5,84.64,10.21,-0.55,0.06,2.72,1,0,">1 nonsynonymous","P7F S41L D90N",3
"lib1","SARS-CoV-2","ATAGTCGCATACCAAT",1,22.8,9.19,-1.58,0.09,2.86,1.14,0,">1 nonsynonymous","A89T Y119T",2
"lib1","SARS-CoV-2","ATAGTCGCCTGATTTA",1,6.67,10.41,-0.35,0.07,3,1.04,0,">1 nonsynonymous","N64P G83R",2
"lib1","SARS-CoV-2","ATAGTCGGGCTATCCG",1,9.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15S L95C S113T L122F C150Y T201E",6
"lib1","SARS-CoV-2","ATAGTCGGGGTGCCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* N64T S139H",3
"lib1","SARS-CoV-2","ATAGTCGGTAGCTCAC",10,29.82,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","S41R L95P P161W N171P",4
"lib1","SARS-CoV-2","ATAGTCGTTTGCATAA",1,16.83,10.85,0.08,0.06,2.98,1,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ATAGTCTATTATCTGT",2,16.62,10.34,-0.42,0.09,2.95,1,0,">1 nonsynonymous","S147F N151C",2
"lib1","SARS-CoV-2","ATAGTCTATTATGAGC",1,22.95,8.18,-2.58,0.37,1.5,1.05,0.06,">1 nonsynonymous","F62S P161V",2
"lib1","SARS-CoV-2","ATAGTCTCATGGAGGA",1,59.68,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A105M G117I I138S Y175S",4
"lib1","SARS-CoV-2","ATAGTCTGAAAACTTC",1,23.46,8.56,-2.2,0.1,2.85,1.1,0,">1 nonsynonymous","K87N G166K",2
"lib1","SARS-CoV-2","ATAGTCTGTGATTACG",8,2.57,NA,NA,NA,NA,NA,NA,"stop","I2R T100M S108* N157V",4
"lib1","SARS-CoV-2","ATAGTGAAATTCGGTC",9,87.6,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107M D137K",2
"lib1","SARS-CoV-2","ATAGTGAAATTGAAAC",4,94.01,10.72,-0.05,0.05,2.94,1.03,0,"1 nonsynonymous","D59A",1
"lib1","SARS-CoV-2","ATAGTGAACGCTCGTC",1,38.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V G51L K87G K114I",4
"lib1","SARS-CoV-2","ATAGTGAACTTTGGGA",3,106.53,10.65,-0.11,0.05,2.94,1.03,0,"1 nonsynonymous","N130F",1
"lib1","SARS-CoV-2","ATAGTGAATGCAATAA",5,84.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F62G N107I",2
"lib1","SARS-CoV-2","ATAGTGACATTCATAG",6,56.98,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y93E N130Q",2
"lib1","SARS-CoV-2","ATAGTGACCATCCTGT",5,51.34,10.79,0.02,0.08,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGTGACGTTAAGGC",5,78.72,10.2,-0.56,0.08,2.73,1.02,0,">1 nonsynonymous","T15P T55S E76D D97C",4
"lib1","SARS-CoV-2","ATAGTGACTAAGAATA",3,22.87,9.78,-0.98,0.09,2.82,1,0,">1 nonsynonymous","C6G R16S N40S",3
"lib1","SARS-CoV-2","ATAGTGAGCGGACACA",6,139.22,10.18,-0.59,0.09,2.55,1,0,">1 nonsynonymous","A81D S164P",2
"lib1","SARS-CoV-2","ATAGTGATGCCTAATA",1,16.97,9.72,-1.05,0.2,2.64,1,0.02,">1 nonsynonymous","S19Q V173Y",2
"lib1","SARS-CoV-2","ATAGTGCAAGATCTCA",8,0.79,NA,NA,NA,NA,NA,NA,"stop","G83V L125* Y159E",3
"lib1","SARS-CoV-2","ATAGTGCACTGCAGTT",3,44.85,10.56,-0.21,0.1,2.83,1,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","ATAGTGCCAATATAAC",4,0.27,NA,NA,NA,NA,NA,NA,"stop","P54H V77* N107F L131V G146I V180A",6
"lib1","SARS-CoV-2","ATAGTGCCCTACTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y119S N157* T170E",3
"lib1","SARS-CoV-2","ATAGTGCCGACCCTAC",4,1.65,NA,NA,NA,NA,NA,NA,"stop","G9* Y91A",2
"lib1","SARS-CoV-2","ATAGTGCCTAAGTCTC",4,75.03,9.27,-1.49,0.12,1.71,1.15,0.01,">1 nonsynonymous","P7V K56L N110W S147I",4
"lib1","SARS-CoV-2","ATAGTGCGATAGAATC",1,27.61,10.15,-0.62,0.08,2.82,1.02,0,">1 nonsynonymous","A22S S164L",2
"lib1","SARS-CoV-2","ATAGTGCGTTCTGAAG",2,17.74,8.61,-2.15,0.2,1.79,1.04,0.01,">1 nonsynonymous","F17K F156V",2
"lib1","SARS-CoV-2","ATAGTGGCATGGCCCT",2,6.56,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","A33L S45L D68L D90T T100S T201H",6
"lib1","SARS-CoV-2","ATAGTGTAAAGACACC",4,22.97,9.69,-1.08,0.12,1.89,1.07,0.01,">1 nonsynonymous","K94L T201M",2
"lib1","SARS-CoV-2","ATAGTGTAATAAGTAC",4,146.11,9.2,-1.56,0.05,2.84,1.1,0,">1 nonsynonymous","D90S Y119M",2
"lib1","SARS-CoV-2","ATAGTGTACTATTGCT",3,17.29,10.29,-0.48,0.11,2.8,1.04,0.01,">1 nonsynonymous","F134Q P149F S164A",3
"lib1","SARS-CoV-2","ATAGTGTATAAAACCA",7,33.93,9.81,-0.95,0.13,2.19,1.07,0.01,">1 nonsynonymous","T15M P96S",2
"lib1","SARS-CoV-2","ATAGTGTATTTCTGGG",2,12.87,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y35T C150Y L162S",3
"lib1","SARS-CoV-2","ATAGTGTGCATGGTAA",2,42.99,10.74,-0.02,0.09,2.89,1.07,0,"1 nonsynonymous","L5A",1
"lib1","SARS-CoV-2","ATAGTGTGTCAATAAT",1,33.68,8.31,-2.46,0.29,1.57,1.02,0.03,">1 nonsynonymous","W106F Y143C F156L",3
"lib1","SARS-CoV-2","ATAGTGTTGGATTGAA",4,23.05,10.62,-0.15,0.05,2.95,1.02,0,">1 nonsynonymous","L5M E141A",2
"lib1","SARS-CoV-2","ATAGTGTTTACGGTAA",4,59.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29L Y39H G101L T201N",4
"lib1","SARS-CoV-2","ATAGTTAAGAAATGAA",1,60.57,10.77,0,0.06,2.97,1,0,">1 nonsynonymous","V37R K199M",2
"lib1","SARS-CoV-2","ATAGTTAATGGAAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I K94C P133E G152V T201I",5
"lib1","SARS-CoV-2","ATAGTTAATTTGGAGA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","V37G K87* T100R",3
"lib1","SARS-CoV-2","ATAGTTACAATATTTG",2,43.8,10.78,0.02,0.05,2.96,1.01,0,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","ATAGTTACCGAACTCC",5,24.68,10.92,0.15,0.09,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGTTAGCAAAATTA",5,81.19,6,-4.76,2,3,1.21,0,">1 nonsynonymous","N64H D90W C150W",3
"lib1","SARS-CoV-2","ATAGTTAGCACAAGGA",2,72.34,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6D G116K P177Y",3
"lib1","SARS-CoV-2","ATAGTTATCTGTGTAA",3,21.78,7.97,-2.79,0.34,1.5,1.09,0.05,"1 nonsynonymous","F99A",1
"lib1","SARS-CoV-2","ATAGTTATGCGCGATT",3,34.9,10.91,0.14,0.09,2.89,1.03,0,">1 nonsynonymous","I2V E76Q",2
"lib1","SARS-CoV-2","ATAGTTCAAGTTGTTT",3,1.35,NA,NA,NA,NA,NA,NA,"stop","A22T A105P Y121*",3
"lib1","SARS-CoV-2","ATAGTTCAATAAACCG",10,122.11,10.86,0.1,0.07,2.93,1.02,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","ATAGTTCCACGAATAT",1,21.48,8.73,-2.03,0.25,1.59,1.18,0.02,"1 nonsynonymous","Y21G",1
"lib1","SARS-CoV-2","ATAGTTCGACGAAGCA",1,9.63,6.72,-4.04,0.52,1.5,1.31,0.04,">1 nonsynonymous","V20T D59M G174W K199R",4
"lib1","SARS-CoV-2","ATAGTTCGCGTCTACA",11,75.23,10.71,-0.06,0.04,2.92,1.04,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","ATAGTTCTCGTTGGTG",4,45.84,9.01,-1.75,0.15,1.5,1.07,0.01,">1 nonsynonymous","A14V W106E",2
"lib1","SARS-CoV-2","ATAGTTGACAGTTTAG",7,262.86,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","K26P V32G V173H Y178I",4
"lib1","SARS-CoV-2","ATAGTTGACGTACTTT",11,91.96,6,-4.76,1.76,1.5,1.14,0.01,">1 nonsynonymous","F8K K94E Y143I V173D",4
"lib1","SARS-CoV-2","ATAGTTGATACATTAA",8,111.6,10.64,-0.13,0.05,2.85,1.08,0,"1 nonsynonymous","P169R",1
"lib1","SARS-CoV-2","ATAGTTGATCACCCTT",1,24.6,8.16,-2.6,0.38,1.5,1,0.07,">1 nonsynonymous","T55E G116C Y165T",3
"lib1","SARS-CoV-2","ATAGTTGGACATCACG",2,49.68,10.8,0.04,0.08,2.92,1.05,0,">1 nonsynonymous","V37Y K56D",2
"lib1","SARS-CoV-2","ATAGTTGGGCAATAAG",1,5.06,10.63,-0.14,0.23,2.92,1,0.01,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","ATAGTTGGTGTTGCAA",1,46.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N120L K128G Y159A G166H",4
"lib1","SARS-CoV-2","ATAGTTTAAAAAACCA",8,99.03,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V11D Y35Q T46S D98F",4
"lib1","SARS-CoV-2","ATAGTTTAAACTATTG",2,21.4,7.92,-2.85,0.18,1.5,1,0.01,">1 nonsynonymous","R27P Y165T",2
"lib1","SARS-CoV-2","ATAGTTTAGCGTAACT",1,33.28,8.39,-2.37,0.14,2.87,1,0.01,">1 nonsynonymous","L60Y T100H N118K N157D",4
"lib1","SARS-CoV-2","ATAGTTTCCAAATACC",1,11.59,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C61R P96H Y123T",3
"lib1","SARS-CoV-2","ATAGTTTGAAAAGTGC",2,34.43,9.61,-1.15,0.12,1.88,1.16,0.01,">1 nonsynonymous","C6K F12V K56D",3
"lib1","SARS-CoV-2","ATAGTTTGGATTACCC",2,49.5,8.42,-2.34,0.23,1.87,1.09,0.02,">1 nonsynonymous","G83A S113Y",2
"lib1","SARS-CoV-2","ATAGTTTGGGCACCTG",1,35.51,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","L122M F167K T201V",3
"lib1","SARS-CoV-2","ATAGTTTGGTAACCGG",5,45.71,8.3,-2.47,0.27,1.5,1.17,0.03,">1 nonsynonymous","K48F T100N P149M E154L",4
"lib1","SARS-CoV-2","ATAGTTTGGTGAAGTG",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y P149I P169C",3
"lib1","SARS-CoV-2","ATAGTTTGTCTTAAGG",2,83.69,10.79,0.02,0.07,2.92,1.04,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","ATAGTTTTAAACATTA",3,36.59,8.62,-2.14,0.25,1.5,1.07,0.02,">1 nonsynonymous","N4M K56Y Y93F",3
"lib1","SARS-CoV-2","ATAGTTTTAAGATGAT",2,37.93,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G51H F167V",2
"lib1","SARS-CoV-2","ATAGTTTTATACATCA",5,117.37,10.73,-0.03,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATAGTTTTGAGCTTCA",4,0.11,NA,NA,NA,NA,NA,NA,"stop","S19A R27Q Y39C V115* G174T",5
"lib1","SARS-CoV-2","ATATAAAAAACACACC",3,20.8,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C6W I88C",2
"lib1","SARS-CoV-2","ATATAAAAAATGTCAA",1,14.28,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V52T F70L K198S",3
"lib1","SARS-CoV-2","ATATAAAAACATTCGC",13,164.09,6.97,-3.79,0.25,1.5,1.1,0.01,">1 nonsynonymous","Y121Q Q176T",2
"lib1","SARS-CoV-2","ATATAAAAAGACGTGC",5,33.08,6.61,-4.15,0.58,1.5,1.09,0.04,">1 nonsynonymous","N4S N92R",2
"lib1","SARS-CoV-2","ATATAAAAATGTGATA",3,2.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63F",1
"lib1","SARS-CoV-2","ATATAAAACCCCATGA",3,45.97,10.66,-0.11,0.07,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATAAAAGGCAGGCT",2,5.46,7.74,-3.02,0.46,1.5,1,0.06,">1 nonsynonymous","F8H V52L A81Q W106R",4
"lib1","SARS-CoV-2","ATATAAAATAAAGATA",7,57.46,8.49,-2.27,0.14,2.66,1.04,0.01,">1 nonsynonymous","S43L Y119S I142N",3
"lib1","SARS-CoV-2","ATATAAAATAGCCAAA",13,94.53,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S19A A89Q A105I F167K G196W",5
"lib1","SARS-CoV-2","ATATAAAATAGGAAAG",4,0,NA,NA,NA,NA,NA,NA,"stop","A14S Y35R S45R Y50* V103T E135S",6
"lib1","SARS-CoV-2","ATATAAAATATAAATG",4,26.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R R124A",2
"lib1","SARS-CoV-2","ATATAAAATTTTGGTC",1,18.43,10.31,-0.45,0.07,2.95,1,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","ATATAAACAAAAAATC",1,35.34,9.63,-1.14,0.17,1.76,1.16,0.01,">1 nonsynonymous","A18I K114T",2
"lib1","SARS-CoV-2","ATATAAACAATTGATA",4,0.42,NA,NA,NA,NA,NA,NA,"stop","T3R R16Y T85E A105I W106* Q176A T201G",7
"lib1","SARS-CoV-2","ATATAAACATGGCTGG",8,0.14,NA,NA,NA,NA,NA,NA,"stop","I88K G146* N151K G172E",4
"lib1","SARS-CoV-2","ATATAAACCACCTACA",4,423.06,10.41,-0.36,0.05,2.9,1.02,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","ATATAAACCCAATACG",2,15.51,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13L C49L Y119K G152L",4
"lib1","SARS-CoV-2","ATATAAACCTACAGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","V32K T55R Y93* G117A R136L",5
"lib1","SARS-CoV-2","ATATAAACGGAATAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38M T85V L95* I138P Y165F",5
"lib1","SARS-CoV-2","ATATAAACTCCTATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","S139* N171T",2
"lib1","SARS-CoV-2","ATATAAAGAATATCGC",5,60.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L S41G P96A",3
"lib1","SARS-CoV-2","ATATAAAGCCAAAAAA",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATAAAGCCCTACAA",2,32.18,9.06,-1.7,0.27,1.59,1.19,0.04,">1 nonsynonymous","L5R Y50N L122R T170D",4
"lib1","SARS-CoV-2","ATATAAAGCTAAAAGA",10,132.05,10.76,-0.01,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATAAAGGAGGTTTC",4,17.93,10.79,0.03,0.06,2.92,1.02,0,"1 nonsynonymous","V173C",1
"lib1","SARS-CoV-2","ATATAAAGTCATACAG",3,67.69,10.67,-0.1,0.04,2.94,1.02,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","ATATAAAGTTGCGATG",1,5.48,7.19,-3.58,0.59,3,1.17,0.01,">1 nonsynonymous","S41E L60E N107K K132T N151R",5
"lib1","SARS-CoV-2","ATATAAATAAAAAAGA",5,49.67,10.76,0,0.06,2.95,1.04,0,">1 nonsynonymous","R16I Y35M",2
"lib1","SARS-CoV-2","ATATAAATAAAAGAAA",11,5.93,10.84,0.07,0.63,1.61,1,0.07,">1 nonsynonymous","N24R P82N P197S",3
"lib1","SARS-CoV-2","ATATAAATCGGGATTG",6,24.26,6.05,-4.72,0.67,1.5,1.16,0.01,">1 nonsynonymous","G86W E186S",2
"lib1","SARS-CoV-2","ATATAAATCGTACCTT",5,58.61,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K26Y G117M P161V",3
"lib1","SARS-CoV-2","ATATAAATCTGAAATT",9,217.7,9.62,-1.14,0.1,2.22,1.07,0,">1 nonsynonymous","C6R T148D H189A",3
"lib1","SARS-CoV-2","ATATAAATGAAAATTC",6,72.05,8.72,-2.04,0.09,2.87,1.08,0,">1 nonsynonymous","G9R T100L G117D",3
"lib1","SARS-CoV-2","ATATAAATGAAGACCT",2,26.6,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","V77M D97R N107S L162C",4
"lib1","SARS-CoV-2","ATATAAATTCAACCGG",8,22.12,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A33T A42R D98V K132V G152S N171D",6
"lib1","SARS-CoV-2","ATATAAATTCAAGTCA",4,76.47,10.23,-0.53,0.05,2.76,1.03,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","ATATAAATTCCCTGCC",3,12.57,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","F8N V37I F70E",3
"lib1","SARS-CoV-2","ATATAACAAAACAAGT",6,139.23,10.74,-0.02,0.06,2.87,1.08,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","ATATAACAAAACCCAT",4,266.5,8.69,-2.08,0.12,2,1.08,0.01,">1 nonsynonymous","L122H P133S Q176H",3
"lib1","SARS-CoV-2","ATATAACAAAATAGAA",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C W106L G174T",3
"lib1","SARS-CoV-2","ATATAACAAAATATTC",4,74.9,10.44,-0.32,0.06,2.95,1.04,0,">1 nonsynonymous","T46W D98E",2
"lib1","SARS-CoV-2","ATATAACAAAGGAAAA",4,19.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T15E L60Q I88L L95M G116L",5
"lib1","SARS-CoV-2","ATATAACAACGGCATA",9,100.28,9.16,-1.61,0.07,2.79,1.1,0,">1 nonsynonymous","D98N G117L",2
"lib1","SARS-CoV-2","ATATAACAAGGAATGG",9,213.72,10.69,-0.07,0.05,2.91,1.05,0,"1 nonsynonymous","V153C",1
"lib1","SARS-CoV-2","ATATAACAATAGCAAC",1,24.98,6.24,-4.52,1.06,1.5,1.14,0.05,">1 nonsynonymous","D34G V77E",2
"lib1","SARS-CoV-2","ATATAACACAAAGTGC",2,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119H K128M",2
"lib1","SARS-CoV-2","ATATAACACAAATACA",2,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G E76R N118L V182R",4
"lib1","SARS-CoV-2","ATATAACACACTTCAA",6,55.29,7.71,-3.05,0.33,1.5,1.01,0.05,">1 nonsynonymous","R127F S184G",2
"lib1","SARS-CoV-2","ATATAACAGGAGCAAA",4,40.12,6,-4.76,1.83,1.5,1.2,0.02,">1 nonsynonymous","Y91E V153W",2
"lib1","SARS-CoV-2","ATATAACATCAACATG",5,24.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50L I80G T140A V180Y",4
"lib1","SARS-CoV-2","ATATAACATGTTTATT",6,43.2,6.02,-4.74,1.29,1.5,1.2,0.02,"1 nonsynonymous","V182F",1
"lib1","SARS-CoV-2","ATATAACATTTTACGG",1,9.83,10.76,-0.01,0.08,2.91,1.07,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATATAACCCAACTAAG",4,60.96,10.2,-0.57,0.05,2.83,1.05,0,">1 nonsynonymous","C6T S41T",2
"lib1","SARS-CoV-2","ATATAACCGGGCCGGA",2,87.6,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I72L P96G N118P Y175M",4
"lib1","SARS-CoV-2","ATATAACCTGTTGACA",5,2.38,NA,NA,NA,NA,NA,NA,"stop","T85N I104F E141V P161*",4
"lib1","SARS-CoV-2","ATATAACGAAGAAATA",2,16.97,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","W106K R179S",2
"lib1","SARS-CoV-2","ATATAACGACCACGAA",3,45.32,10.81,0.04,0.1,2.83,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATAACGACCCCTCT",2,46.29,10.71,-0.05,0.11,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATAACGCAAGCCAT",5,32.82,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V11Q G51C Q84I G146I Q163L",5
"lib1","SARS-CoV-2","ATATAACGTCTAAGCG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F A89G",2
"lib1","SARS-CoV-2","ATATAACTAGTTATGA",7,129.14,8.9,-1.86,0.07,2.77,1.15,0,">1 nonsynonymous","G155V Y175H",2
"lib1","SARS-CoV-2","ATATAACTATAGCATC",13,24.36,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","S41I K56L D68K S113L P133Y",5
"lib1","SARS-CoV-2","ATATAACTGAGAGCGG",5,76.07,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N30S L38C P54F Y119L T170M",5
"lib1","SARS-CoV-2","ATATAACTGGCCATAA",1,0.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94W",1
"lib1","SARS-CoV-2","ATATAAGAACTACAAA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","G83* G117V F156T",3
"lib1","SARS-CoV-2","ATATAAGAATATAGAT",3,108.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39G S45L T55P K87G Y91V F156W",6
"lib1","SARS-CoV-2","ATATAAGAATGAGGTT",1,35.45,10.79,0.03,0.1,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATAAGACCGCTCAG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","K26T Y35R C102*",3
"lib1","SARS-CoV-2","ATATAAGACCTAGGGC",5,19.03,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A67L I104D",2
"lib1","SARS-CoV-2","ATATAAGACTATTAGT",3,78.51,10.73,-0.03,0.05,2.92,1.07,0,">1 nonsynonymous","K56H T201K",2
"lib1","SARS-CoV-2","ATATAAGAGAAACAAA",5,47.88,10.86,0.09,0.07,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATAAGATAGCTATA",4,69.15,10.68,-0.08,0.05,2.95,1,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","ATATAAGATCCTACTT",1,92.64,10.3,-0.46,0.04,2.82,1.04,0,">1 nonsynonymous","D59R K128F",2
"lib1","SARS-CoV-2","ATATAAGATTAGTACC",7,105.23,9.47,-1.3,0.11,1.92,1.14,0,">1 nonsynonymous","Y21T T140G",2
"lib1","SARS-CoV-2","ATATAAGCAATATGTA",1,2.44,NA,NA,NA,NA,NA,NA,"stop","L57* T85*",2
"lib1","SARS-CoV-2","ATATAAGCGAGCAAAA",5,0.72,NA,NA,NA,NA,NA,NA,"stop","F8L V77F I138* Q176C S200*",5
"lib1","SARS-CoV-2","ATATAAGCTGATAAGG",10,1.68,NA,NA,NA,NA,NA,NA,"stop","C6N S19Y Y39* G117F K128I",5
"lib1","SARS-CoV-2","ATATAAGGACAGAGTC",3,20.75,8.56,-2.21,0.36,1.5,1,0.06,">1 nonsynonymous","G83S D97G Y121R",3
"lib1","SARS-CoV-2","ATATAAGTAACAGACA",9,100.23,9.8,-0.97,0.11,1.76,1.11,0,">1 nonsynonymous","G51R L57W Y91N",3
"lib1","SARS-CoV-2","ATATAAGTAGTAATTG",3,27.84,10.55,-0.22,0.06,2.96,1.03,0,"1 nonsynonymous","K94A",1
"lib1","SARS-CoV-2","ATATAAGTAGTTCCCC",2,5.23,6,-4.76,2,3,1.03,0,">1 nonsynonymous","C6F L131T E141G T201I",4
"lib1","SARS-CoV-2","ATATAAGTCACGGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* E10V G146M",3
"lib1","SARS-CoV-2","ATATAAGTGGCAACCA",5,84.69,10.24,-0.53,0.03,2.87,1.04,0,">1 nonsynonymous","V37Y G83F G116V",3
"lib1","SARS-CoV-2","ATATAATACAACTCAA",2,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T D90K N109E G116V Y165M",5
"lib1","SARS-CoV-2","ATATAATACTGCCAGG",7,3.81,NA,NA,NA,NA,NA,NA,"stop","K87Q N107*",2
"lib1","SARS-CoV-2","ATATAATAGAACGCTG",1,7.63,8.42,-2.34,0.08,2.86,1.09,0.01,">1 nonsynonymous","K48T C61E S113V S200L",4
"lib1","SARS-CoV-2","ATATAATATAACAAAA",2,70.13,6.92,-3.84,0.37,1.5,1.24,0.03,">1 nonsynonymous","S45M S69L L122D F134W",4
"lib1","SARS-CoV-2","ATATAATATATAAAAA",5,86.34,6.41,-4.36,0.46,1.5,1.17,0.02,">1 nonsynonymous","S43T D112N N120P",3
"lib1","SARS-CoV-2","ATATAATATATCCGAT",8,27.14,6,-4.76,2,1.5,1.18,0.08,">1 nonsynonymous","Y50N K94F C150R T170S",4
"lib1","SARS-CoV-2","ATATAATATTGAGATA",3,9.26,8.64,-2.13,0.44,1.57,1,0.07,">1 nonsynonymous","T15R G117P S139G C195F",4
"lib1","SARS-CoV-2","ATATAATCAATTCGAA",3,17.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41F F70E L95Y E141D G155W",5
"lib1","SARS-CoV-2","ATATAATCCCTAACAA",2,26.35,10.87,0.1,0.11,2.84,1.06,0,"1 nonsynonymous","I138Q",1
"lib1","SARS-CoV-2","ATATAATCTCTACCTA",3,17.83,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R27A C49N Q79T K87S L188M K199S",6
"lib1","SARS-CoV-2","ATATAATCTGCATATT",4,44.4,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C6L A14W G86C L125G R179Q",5
"lib1","SARS-CoV-2","ATATAATGACCCTGCA",4,112.01,8.67,-2.1,0.17,1.63,1.13,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","ATATAATGCAAAAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S C49W F167E K198H",4
"lib1","SARS-CoV-2","ATATAATGGATATATA",4,18.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G101H Y159K S184H",3
"lib1","SARS-CoV-2","ATATAATTAAACAAAG",3,64.36,8.62,-2.14,0.08,2.96,1.02,0,"1 nonsynonymous","N157L",1
"lib1","SARS-CoV-2","ATATAATTGTAGGACC",4,23.54,9.77,-1,0.17,2.2,1.16,0.01,">1 nonsynonymous","S129L R136V",2
"lib1","SARS-CoV-2","ATATAATTGTCCTGCA",4,27.54,8.95,-1.81,0.39,1.5,1,0.07,">1 nonsynonymous","I28T D112M N118D",3
"lib1","SARS-CoV-2","ATATAATTTCATATTA",3,6.85,6.1,-4.66,0.55,3,1.13,0.01,">1 nonsynonymous","A105R R136D F156K",3
"lib1","SARS-CoV-2","ATATACAAAAACGACC",7,15.71,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T3I A22V N64I D90F S139I",5
"lib1","SARS-CoV-2","ATATACAAACCCAATG",6,69.26,9.75,-1.01,0.07,2.87,1.09,0,">1 nonsynonymous","Y35L K87D",2
"lib1","SARS-CoV-2","ATATACAAACGTTGTG",20,207.97,10.53,-0.24,0.04,2.91,1.01,0,">1 nonsynonymous","A105G E154T",2
"lib1","SARS-CoV-2","ATATACAAATAAGAGT",1,9.33,10.71,-0.06,0.1,2.84,1.1,0.01,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","ATATACAAATGATATG",3,45.83,10.66,-0.11,0.08,2.82,1.12,0,">1 nonsynonymous","V37F F44A T201L",3
"lib1","SARS-CoV-2","ATATACAACCAACGTG",1,48.67,10.75,-0.01,0.06,2.93,1.03,0,">1 nonsynonymous","N151L P197S",2
"lib1","SARS-CoV-2","ATATACAACCTAAGAC",1,109.16,10.7,-0.06,0.05,2.87,1.08,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","ATATACAACTCATTGT",9,136.88,10.06,-0.7,0.08,2.25,1,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","ATATACAACTTACCGT",1,26.28,9.66,-1.1,0.09,2.71,1.12,0,">1 nonsynonymous","Y119K K128W",2
"lib1","SARS-CoV-2","ATATACAAGATAACGC",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I V103S N120Y P161K",4
"lib1","SARS-CoV-2","ATATACAAGTAAAGAA",6,17.79,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V11R Y175F F185N",3
"lib1","SARS-CoV-2","ATATACAAGTAAGTAA",1,11.65,7.57,-3.2,0.27,1.5,1.1,0.02,">1 nonsynonymous","D34G R78P W106K F134Y E141L P149S A190T",7
"lib1","SARS-CoV-2","ATATACAATACGTAGT",2,50.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10D G86S K128V Q144Y",4
"lib1","SARS-CoV-2","ATATACAATGGCAGAC",8,44.99,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I72F V77K",2
"lib1","SARS-CoV-2","ATATACAATGTCTAAA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","T46H Y91F I104* I138S T148F",5
"lib1","SARS-CoV-2","ATATACACGCAAATTG",9,2.35,NA,NA,NA,NA,NA,NA,"stop","N64P K128L V181*",3
"lib1","SARS-CoV-2","ATATACACGGTCGTTA",5,48.24,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L95E S139N",2
"lib1","SARS-CoV-2","ATATACACGTGTGCTA",2,38.86,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F17R C49G R78W L162E",4
"lib1","SARS-CoV-2","ATATACACTTTCCTCC",2,43.52,8.89,-1.88,0.06,2.68,1.14,0,">1 nonsynonymous","C6N Y119K",2
"lib1","SARS-CoV-2","ATATACATAAGAAGAG",5,127.97,8.45,-2.31,0.09,2.47,1.11,0,">1 nonsynonymous","T100Y Q163D Y178Q",3
"lib1","SARS-CoV-2","ATATACATATACTAAT",5,20.86,9.84,-0.93,0.27,1.68,1.24,0.05,">1 nonsynonymous","G9C F12L D34P Y178F",4
"lib1","SARS-CoV-2","ATATACATCTAACTTT",5,28.63,10.25,-0.51,0.07,2.73,1.03,0,"1 nonsynonymous","G83I",1
"lib1","SARS-CoV-2","ATATACATGTTCCAGG",2,57.91,10.63,-0.13,0.04,2.96,1.01,0,"1 nonsynonymous","P149V",1
"lib1","SARS-CoV-2","ATATACATTTATTAGT",1,91.16,9.36,-1.4,0.06,2.8,1.08,0,">1 nonsynonymous","T55A E154Y",2
"lib1","SARS-CoV-2","ATATACATTTGGGGGA",10,268.47,8.55,-2.21,0.1,2.95,1.06,0,"1 nonsynonymous","N157R",1
"lib1","SARS-CoV-2","ATATACCACATACTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","V103L R127* V194I",3
"lib1","SARS-CoV-2","ATATACCATATTGACA",5,57.45,9.43,-1.33,0.07,2.81,1.06,0,">1 nonsynonymous","C61R G146Q",2
"lib1","SARS-CoV-2","ATATACCCAAAAAGCG",6,23.37,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","L38T P96H T201P",3
"lib1","SARS-CoV-2","ATATACCCAAAGTCAG",6,51.67,10.44,-0.32,0.05,2.93,1.03,0,">1 nonsynonymous","N64M S139K",2
"lib1","SARS-CoV-2","ATATACCCGTACCCGG",7,122.7,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8S S41L A81R S139E Y178M",5
"lib1","SARS-CoV-2","ATATACCCTGTTTAGT",11,72.43,10.8,0.03,0.05,2.93,1.04,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","ATATACCGCAAGAATC",17,97.2,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6E T100L S129V D137F F167G",5
"lib1","SARS-CoV-2","ATATACCGCCTCCCCT",9,39.24,6.03,-4.73,0.75,1.5,1.08,0.01,">1 nonsynonymous","G86S D90V N107Y",3
"lib1","SARS-CoV-2","ATATACCGCCTCTTCA",1,1.58,NA,NA,NA,NA,NA,NA,"stop","S41V K56H G83E D90V N130* P161L Q176E",7
"lib1","SARS-CoV-2","ATATACCGTAAATATA",1,0.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134I",1
"lib1","SARS-CoV-2","ATATACCTACCAGACC",1,65.4,9.82,-0.94,0.12,2.26,1.05,0,">1 nonsynonymous","N4Y T46A Y178W",3
"lib1","SARS-CoV-2","ATATACCTACTTACGC",2,127.6,10.16,-0.61,0.04,2.91,1.02,0,"1 nonsynonymous","Y159H",1
"lib1","SARS-CoV-2","ATATACCTCAATCATG",6,47.93,10.77,0,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATACCTGCCTGCAA",2,37.6,10.78,0.02,0.1,2.81,1.14,0,"1 nonsynonymous","N1E",1
"lib1","SARS-CoV-2","ATATACCTTAAATATT",14,208.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83T L95T C158W Q176F",4
"lib1","SARS-CoV-2","ATATACCTTGCTAACT",3,23.07,10.38,-0.39,0.07,2.97,1,0,">1 nonsynonymous","E10P F62L",2
"lib1","SARS-CoV-2","ATATACGACCCTTTAC",4,107.3,10.64,-0.12,0.06,2.87,1.08,0,"1 nonsynonymous","N64D",1
"lib1","SARS-CoV-2","ATATACGACTCAGTGG",7,67.22,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T55Y P82K T140R Q176W",4
"lib1","SARS-CoV-2","ATATACGAGACAAGGT",12,167.35,10.78,0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATACGAGATACAGA",1,27.79,6.58,-4.18,0.34,2.21,1.18,0.01,">1 nonsynonymous","V71M K94V",2
"lib1","SARS-CoV-2","ATATACGAGGCTGTAA",2,45.63,8.99,-1.78,0.2,1.8,1.13,0.02,">1 nonsynonymous","N13F N58R K128S G146T",4
"lib1","SARS-CoV-2","ATATACGATAGGATAT",4,2050.62,9.55,-1.21,0.04,2.84,1.07,0,">1 nonsynonymous","K56M F126I",2
"lib1","SARS-CoV-2","ATATACGATATACATA",1,41.57,10.77,0,0.06,2.92,1.02,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","ATATACGCAGCAGTCA",2,22.11,9.84,-0.92,0.18,2.43,1,0.01,">1 nonsynonymous","G51Q N107C",2
"lib1","SARS-CoV-2","ATATACGCCGGTCCAA",3,77.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K128V G155Y F167D",3
"lib1","SARS-CoV-2","ATATACGGAAGATTGC",2,80.23,10.38,-0.39,0.05,2.9,1,0,">1 nonsynonymous","K87R A105G",2
"lib1","SARS-CoV-2","ATATACGGCCATACTT",1,28.45,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y121G V153S Y165S",3
"lib1","SARS-CoV-2","ATATACGGCCATAGCT",2,15.66,10.73,-0.04,0.09,2.68,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATACGGGCATAAAT",1,1.82,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib1","SARS-CoV-2","ATATACGGGTTCCACG",2,68.47,10.75,-0.01,0.07,2.83,1.07,0,">1 nonsynonymous","D98G L122S",2
"lib1","SARS-CoV-2","ATATACGGTCTTCCAG",2,8.11,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T3V G9K F62D A89I N107M",5
"lib1","SARS-CoV-2","ATATACGGTGATAAAA",2,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S W106P N120L N157S",4
"lib1","SARS-CoV-2","ATATACGTATTATTTA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","I28* F44N G51C T63D T85P",5
"lib1","SARS-CoV-2","ATATACTAAGCCAGAG",4,25.4,7.16,-3.6,0.36,1.5,1.09,0.04,">1 nonsynonymous","I28R T55L T63R D97N K114L C158G",6
"lib1","SARS-CoV-2","ATATACTAAGCTCCAA",7,85.1,9.45,-1.31,0.15,1.62,1.14,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","ATATACTACAATACTG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","N4G Y93* K128I T170L",4
"lib1","SARS-CoV-2","ATATACTCATTAATCC",3,0.84,NA,NA,NA,NA,NA,NA,"stop","S36M K94R K128D E154*",4
"lib1","SARS-CoV-2","ATATACTCCAAGCAGT",2,6.87,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y66F V77H R127T",3
"lib1","SARS-CoV-2","ATATACTCGAAGTATT",2,23.73,8.04,-2.72,0.23,1.5,1.13,0.02,">1 nonsynonymous","V37S N64P D75L Y91F E154W",5
"lib1","SARS-CoV-2","ATATACTCGGTTGACT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87F Q163N",2
"lib1","SARS-CoV-2","ATATACTGCATGGTCA",2,10.22,6.34,-4.42,0.78,1.64,1.07,0.03,">1 nonsynonymous","F12S I28E F44T Y93C P197A",5
"lib1","SARS-CoV-2","ATATACTGGCATCATC",7,76.44,9.18,-1.59,0.21,1.52,1.19,0.02,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","ATATACTTACAAGCCT",4,66.77,10.63,-0.13,0.04,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATACTTGTAACAAA",2,25.75,10.78,0.02,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATACTTTAAGGTTC",3,72.25,10.79,0.03,0.09,2.91,1.04,0,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","ATATAGAAAAGAAGGA",3,60.14,10.47,-0.3,0.05,2.89,1.07,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","ATATAGAAACGAATTA",6,45.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R25S G51I L131V",3
"lib1","SARS-CoV-2","ATATAGAAACGATGAG",3,6.39,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S53L I104N S113L Q176S S200N",5
"lib1","SARS-CoV-2","ATATAGAAACTCGACA",3,30.31,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","V37Y C49F S69M G117C T140K",5
"lib1","SARS-CoV-2","ATATAGAAATCAATTA",3,26.82,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","L5D G101N R127C G166R P169T",5
"lib1","SARS-CoV-2","ATATAGAACTCAATTT",4,9.46,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17N R27F F70Y C102A T148F",5
"lib1","SARS-CoV-2","ATATAGAACTGAGAAA",8,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T Y121D T201M",3
"lib1","SARS-CoV-2","ATATAGAACTGATCCG",8,79.3,10.57,-0.19,0.04,2.78,1.04,0,">1 nonsynonymous","G9W K56T E141I P197S",4
"lib1","SARS-CoV-2","ATATAGAATAAAATAA",2,12.3,10.53,-0.23,0.07,2.85,1.03,0,">1 nonsynonymous","I104M G155S",2
"lib1","SARS-CoV-2","ATATAGAATGGAATAC",7,89.04,8.66,-2.1,0.09,2.75,1.08,0,">1 nonsynonymous","N1V I142Y G166T",3
"lib1","SARS-CoV-2","ATATAGACGTTTGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31A N130* F156A",3
"lib1","SARS-CoV-2","ATATAGACTACACTAA",1,13.24,6,-4.76,2,3,1.16,0,">1 nonsynonymous","L57E V77G P82L S129R",4
"lib1","SARS-CoV-2","ATATAGACTAGACGTT",2,15.45,8.6,-2.16,0.28,1.5,1.04,0.03,">1 nonsynonymous","K94L N120L",2
"lib1","SARS-CoV-2","ATATAGAGGACTAATC",2,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y I80M G83T P96F G101F G172Y",6
"lib1","SARS-CoV-2","ATATAGAGGGCGCAAA",5,1.13,NA,NA,NA,NA,NA,NA,"stop","F17R K56*",2
"lib1","SARS-CoV-2","ATATAGAGGTAGTGAG",9,178.45,10.8,0.03,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATAGAGTAATACCG",3,29.38,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A89R C102F W106R S113K S184V",5
"lib1","SARS-CoV-2","ATATAGAGTGCTATTT",19,341.39,10.28,-0.48,0.06,2.52,1.05,0,">1 nonsynonymous","T100S K128V",2
"lib1","SARS-CoV-2","ATATAGATACAATTTT",7,50.98,10.24,-0.53,0.11,2.2,1.03,0,">1 nonsynonymous","N30W A81S D97L T148M",4
"lib1","SARS-CoV-2","ATATAGATACCCACCT",5,1.63,NA,NA,NA,NA,NA,NA,"stop","P7K D97* P149R T170I",4
"lib1","SARS-CoV-2","ATATAGATGCAATTTA",3,11.72,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G83F P133V N151I Y159S",4
"lib1","SARS-CoV-2","ATATAGATGTAAACAG",2,7.24,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34I F70D E76V T148G",4
"lib1","SARS-CoV-2","ATATAGATGTTACTGG",2,10.61,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V52R R124A",2
"lib1","SARS-CoV-2","ATATAGCAAAATATAT",1,17.84,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","L60H L95N T100W",3
"lib1","SARS-CoV-2","ATATAGCAAATGTGGT",5,3.51,NA,NA,NA,NA,NA,NA,"stop","D34G L57R P149* L162R T170H",5
"lib1","SARS-CoV-2","ATATAGCCGTCACGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T55E Y143*",2
"lib1","SARS-CoV-2","ATATAGCCTCATAAAA",2,59.92,10.2,-0.56,0.08,2.73,1.06,0,"1 nonsynonymous","D34T",1
"lib1","SARS-CoV-2","ATATAGCCTGAAACTA",5,56.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C6P V20P P177R",3
"lib1","SARS-CoV-2","ATATAGCCTGCAATTA",1,5.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S45V L95N D98G N118L",4
"lib1","SARS-CoV-2","ATATAGCGGCAATAGT",7,123.29,10.38,-0.38,0.04,2.9,1,0,">1 nonsynonymous","Y121Q P149G T201Q",3
"lib1","SARS-CoV-2","ATATAGCGTAAAATAA",3,35.3,10.79,0.02,0.05,2.99,1,0,"1 nonsynonymous","Q84K",1
"lib1","SARS-CoV-2","ATATAGCTAGGCTGAA",2,12.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6S S29A D59G G101V G117S Y159F N171Q",7
"lib1","SARS-CoV-2","ATATAGCTCTAGACTA",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A N92R",2
"lib1","SARS-CoV-2","ATATAGGAAACGGACC",2,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A Y35G F44V",3
"lib1","SARS-CoV-2","ATATAGGAAACGTTTG",8,133.46,9.46,-1.3,0.05,2.85,1.09,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","ATATAGGAACAAATAC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","F12* V103A Q163R",3
"lib1","SARS-CoV-2","ATATAGGACATAAGAG",4,102.85,9.31,-1.45,0.05,2.82,1.1,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","ATATAGGACCTAATCC",1,42.59,6,-4.76,2,1.5,1.14,0.02,"1 nonsynonymous","T46D",1
"lib1","SARS-CoV-2","ATATAGGATAACTGGT",3,1.42,NA,NA,NA,NA,NA,NA,"stop","A22* T63*",2
"lib1","SARS-CoV-2","ATATAGGATTCTAGCT",1,9.94,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","S41A P54W D68A Q144M",4
"lib1","SARS-CoV-2","ATATAGGGAGGAACTT",5,22.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49S R136L Y165N",3
"lib1","SARS-CoV-2","ATATAGGGATCTGATG",5,62.38,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A18Y C61H Y93F G101I T148R",5
"lib1","SARS-CoV-2","ATATAGGTAAGGCCAT",3,59.68,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V37I D59R N157Y V181N K198V",5
"lib1","SARS-CoV-2","ATATAGGTAGAACATA",12,0.26,NA,NA,NA,NA,NA,NA,"stop","R27* V37S D97S",3
"lib1","SARS-CoV-2","ATATAGGTGATACTGG",7,86.57,10.7,-0.06,0.05,2.91,1,0,">1 nonsynonymous","D97R T148D",2
"lib1","SARS-CoV-2","ATATAGGTTTTAACTT",8,187.93,10.71,-0.06,0.05,2.86,1.06,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","ATATAGTAAATACAAA",5,103.26,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I138M F156N P177I",3
"lib1","SARS-CoV-2","ATATAGTAATAAAATC",4,107.61,10.25,-0.52,0.06,2.88,1,0,">1 nonsynonymous","L57E K198E",2
"lib1","SARS-CoV-2","ATATAGTATAGAAGTA",4,54.02,10.59,-0.18,0.08,2.78,1.09,0,">1 nonsynonymous","N1R K56F N171T",3
"lib1","SARS-CoV-2","ATATAGTATGGTTACA",5,38.39,9.41,-1.36,0.12,2.44,1.13,0.01,">1 nonsynonymous","R73T D98R",2
"lib1","SARS-CoV-2","ATATAGTCCAGGCCGT",1,14.1,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L5R R25T P82L D137E P191T K198N",6
"lib1","SARS-CoV-2","ATATAGTCGTACATCA",12,146.07,10.73,-0.04,0.04,2.93,1.03,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","ATATAGTGAAACGGCG",3,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A Q84K E135N",3
"lib1","SARS-CoV-2","ATATAGTTGACAAAGG",1,0.33,NA,NA,NA,NA,NA,NA,"stop","D90* L122K",2
"lib1","SARS-CoV-2","ATATATAAAAGGTCGC",4,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184I",1
"lib1","SARS-CoV-2","ATATATAAATAAATTT",1,7.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W A22G L38T G51Q F70L W106D D112S",7
"lib1","SARS-CoV-2","ATATATAACAAATAAT",6,1.8,NA,NA,NA,NA,NA,NA,"stop","F12H Q84* P149Q P161I",4
"lib1","SARS-CoV-2","ATATATAACACGAAGG",1,0.75,NA,NA,NA,NA,NA,NA,"stop","I2F P7I A14H A81V K87* A105Y",6
"lib1","SARS-CoV-2","ATATATAACACTAGAA",4,95.58,9.97,-0.79,0.07,2.75,1.04,0,">1 nonsynonymous","V71L G174R",2
"lib1","SARS-CoV-2","ATATATAACAGAGACA",5,20.42,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","F44T D59Y G101D E141S",4
"lib1","SARS-CoV-2","ATATATAACATGGCCA",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95P S184C",2
"lib1","SARS-CoV-2","ATATATAACATTTCAT",2,13.89,10.43,-0.33,0.11,2.85,1.06,0,">1 nonsynonymous","L5A N58K F134Y S184I",4
"lib1","SARS-CoV-2","ATATATAACGAAAACC",6,170.02,9.67,-1.09,0.1,2.28,1.05,0,">1 nonsynonymous","L5T Y66C G155W",3
"lib1","SARS-CoV-2","ATATATAACGCTTGTA",2,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N64I E141T V181A",4
"lib1","SARS-CoV-2","ATATATAAGCATCCAC",8,97.42,10.59,-0.17,0.04,2.87,1.06,0,">1 nonsynonymous","D90R V194A",2
"lib1","SARS-CoV-2","ATATATAATAAAGGAT",6,25.4,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","D34R V77W G83A L95G",4
"lib1","SARS-CoV-2","ATATATAATAAGTAGT",1,14.81,10.64,-0.13,0.05,2.93,1,0,">1 nonsynonymous","T100L L125M",2
"lib1","SARS-CoV-2","ATATATAATATAATTG",6,141.98,10.64,-0.12,0.03,2.94,1.02,0,">1 nonsynonymous","T55V C195M",2
"lib1","SARS-CoV-2","ATATATAATATACTCC",2,13.72,10.34,-0.42,0.1,2.71,1.02,0.01,">1 nonsynonymous","Y21W S41V",2
"lib1","SARS-CoV-2","ATATATAATCCTCGCC",11,377.27,8.19,-2.57,0.17,1.89,1.11,0.01,">1 nonsynonymous","Y35S N157T",2
"lib1","SARS-CoV-2","ATATATACGATAAAGG",13,135.6,8.53,-2.23,0.15,1.87,1.09,0.01,">1 nonsynonymous","G83D T140P G174L",3
"lib1","SARS-CoV-2","ATATATACGATTCACC",4,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F156T K199T",2
"lib1","SARS-CoV-2","ATATATACTATGTCCA",5,47.74,10.44,-0.32,0.07,2.82,1.08,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","ATATATACTGCCGAAA",6,18.42,6,-4.76,2,1.5,1.31,0.04,"1 nonsynonymous","V182G",1
"lib1","SARS-CoV-2","ATATATAGAGTATTAT",3,11.75,7.82,-2.95,0.37,1.5,1,0.04,">1 nonsynonymous","N118T Y165L",2
"lib1","SARS-CoV-2","ATATATAGGAAAGACC",3,88.87,10.8,0.03,0.07,2.9,1.07,0,">1 nonsynonymous","T148A L188C",2
"lib1","SARS-CoV-2","ATATATAGTCAAAAAT",2,24.24,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8R N92S N151K",3
"lib1","SARS-CoV-2","ATATATAGTTCCATAT",5,70.85,10.41,-0.35,0.05,2.9,1.01,0,">1 nonsynonymous","E154S Y178C",2
"lib1","SARS-CoV-2","ATATATATAACATCCG",5,55.31,6,-4.76,1.35,1.5,1.24,0.03,">1 nonsynonymous","C6G E76R",2
"lib1","SARS-CoV-2","ATATATATAATAACCT",5,93.9,10.19,-0.58,0.04,2.87,1.07,0,">1 nonsynonymous","D90N D98R G152S",3
"lib1","SARS-CoV-2","ATATATATCATACGAA",3,25.16,6.37,-4.4,0.54,1.65,1.23,0.02,">1 nonsynonymous","W106V P133K T201V",3
"lib1","SARS-CoV-2","ATATATATCGTCAGTA",1,54.2,10.41,-0.35,0.05,2.96,1,0,"1 nonsynonymous","P7F",1
"lib1","SARS-CoV-2","ATATATATGCGTTAAT",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F156P A190E",2
"lib1","SARS-CoV-2","ATATATATTGCCGCAT",1,13.73,10.14,-0.63,0.27,2.7,1,0.07,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","ATATATATTTTGCCGC",2,42.64,10.78,0.02,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATATCAACCTCAAA",10,102.96,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93H N120T P133G F156T",4
"lib1","SARS-CoV-2","ATATATCAAGACTGGT",4,41.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8D A18Y S43D N157L F167L",5
"lib1","SARS-CoV-2","ATATATCAATAGTACG",1,0.72,NA,NA,NA,NA,NA,NA,"stop","I88* D97L T140Q",3
"lib1","SARS-CoV-2","ATATATCACGACGTCA",4,57.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L131S Y165L",2
"lib1","SARS-CoV-2","ATATATCACGTGTTGA",6,58.73,9.33,-1.43,0.19,1.6,1.17,0.01,">1 nonsynonymous","D90L S139F",2
"lib1","SARS-CoV-2","ATATATCATTGCTACA",2,50.05,9.65,-1.11,0.12,2.61,1.09,0,">1 nonsynonymous","F44C E154M",2
"lib1","SARS-CoV-2","ATATATCCATTTAAAA",7,12.4,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","T140V S147A R179I H189Y",4
"lib1","SARS-CoV-2","ATATATCCCTGCGAGC",1,16.69,7.01,-3.75,0.36,1.5,1.08,0.04,">1 nonsynonymous","C6R G117V",2
"lib1","SARS-CoV-2","ATATATCCGAAGCAAA",2,17.57,8.53,-2.23,0.33,1.58,1.16,0.04,">1 nonsynonymous","L57N A105V",2
"lib1","SARS-CoV-2","ATATATCCTTACATAG",10,1.55,NA,NA,NA,NA,NA,NA,"stop","C6* I28V S43H",3
"lib1","SARS-CoV-2","ATATATCGAGCAACTT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","N110V K128*",2
"lib1","SARS-CoV-2","ATATATCGCTAGTGTT",2,73.82,10.73,-0.03,0.04,2.99,1,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","ATATATCTCACAATTA",1,6.88,10.89,0.13,0.11,2.83,1.11,0,"1 nonsynonymous","E154N",1
"lib1","SARS-CoV-2","ATATATCTGGGAGTGA",9,88.52,10.68,-0.08,0.1,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATATCTTAATAGGT",5,17.43,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T3R W23R C31S",3
"lib1","SARS-CoV-2","ATATATGAAAAAACAA",1,20.98,10.32,-0.44,0.17,2.72,1,0.01,"1 nonsynonymous","P133F",1
"lib1","SARS-CoV-2","ATATATGAAACGGGAA",3,29.37,10.1,-0.66,0.12,2.76,1.02,0.01,">1 nonsynonymous","T46N T55E E186P",3
"lib1","SARS-CoV-2","ATATATGAAATGATGC",5,97.05,10.38,-0.39,0.05,2.9,1.01,0,">1 nonsynonymous","P7L K56T V173I",3
"lib1","SARS-CoV-2","ATATATGAACCATGAA",3,14.65,10.71,-0.05,0.09,2.97,1,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","ATATATGAAGAAAACG",4,30.32,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N13G R27L A33P V103C N109I",5
"lib1","SARS-CoV-2","ATATATGACACAAAAA",9,89.76,6.38,-4.38,0.57,1.5,1.18,0.02,">1 nonsynonymous","S45M D68E",2
"lib1","SARS-CoV-2","ATATATGAGCGAGCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N K198G",2
"lib1","SARS-CoV-2","ATATATGCATAAACGG",2,34.06,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","R25A T85L D90N N107Y S113H Y165P",6
"lib1","SARS-CoV-2","ATATATGCATGACCAA",2,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N D59A R73Y I88R L183A",5
"lib1","SARS-CoV-2","ATATATGCATTTGGAT",4,26.56,6,-4.76,2,3,1.2,0,">1 nonsynonymous","N92F S129P P149L",3
"lib1","SARS-CoV-2","ATATATGCCTTCGGGG",1,16.43,8.52,-2.24,0.14,2.49,1.14,0.01,">1 nonsynonymous","I104F S113P",2
"lib1","SARS-CoV-2","ATATATGCTTTCGGGG",1,2.71,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATATGGAATAAGTG",4,21.47,6.15,-4.62,0.83,1.5,1.2,0.03,">1 nonsynonymous","S43M D97Y I104Q",3
"lib1","SARS-CoV-2","ATATATGGCAAACCCA",2,31.08,6,-4.76,2,1.5,1.25,0.07,"1 nonsynonymous","I72F",1
"lib1","SARS-CoV-2","ATATATGGCCAAGGGA",6,11.45,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","Y66P",1
"lib1","SARS-CoV-2","ATATATGGCTTTGTAA",4,106.76,8.54,-2.22,0.08,2.41,1.1,0,"1 nonsynonymous","Q176V",1
"lib1","SARS-CoV-2","ATATATGGGTCAATTA",6,135.85,9.56,-1.21,0.09,2.66,1.04,0,"1 nonsynonymous","G74N",1
"lib1","SARS-CoV-2","ATATATGGTATAACAG",2,52.78,9.61,-1.15,0.18,2.38,1.11,0.01,">1 nonsynonymous","D90Y P169Y",2
"lib1","SARS-CoV-2","ATATATGTACAATAAT",2,61.4,10.72,-0.05,0.06,2.88,1.07,0,"1 nonsynonymous","F160I",1
"lib1","SARS-CoV-2","ATATATGTCGTAACGC",4,1.23,NA,NA,NA,NA,NA,NA,"stop","K48L L131* G146S G152N L183A",5
"lib1","SARS-CoV-2","ATATATGTGCAAAATA",4,247.1,10.75,-0.02,0.06,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATATGTTAACTGAC",1,17.49,8.88,-1.88,0.17,2.71,1.08,0.01,">1 nonsynonymous","Y66M Y119L",2
"lib1","SARS-CoV-2","ATATATGTTACGTATA",1,23.7,6.79,-3.98,0.59,1.5,1.11,0.06,">1 nonsynonymous","P7C A18E N92F T100S F126C",5
"lib1","SARS-CoV-2","ATATATGTTTAAATAA",2,5.54,6.66,-4.1,0.45,1.5,1.1,0.07,">1 nonsynonymous","D34P D98R N107K N120R",4
"lib1","SARS-CoV-2","ATATATTACCACAACA",7,4.31,NA,NA,NA,NA,NA,NA,"stop","K56V K128* Y165L",3
"lib1","SARS-CoV-2","ATATATTACGATCCTG",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S Y66A V71E R124A",4
"lib1","SARS-CoV-2","ATATATTAGCTTGACG",6,44.35,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5S N92F E141S",3
"lib1","SARS-CoV-2","ATATATTATAGAGTAA",7,2.03,NA,NA,NA,NA,NA,NA,"stop","A105E R179* A190T",3
"lib1","SARS-CoV-2","ATATATTATATGGCCC",4,125.17,10.07,-0.7,0.07,2.63,1.04,0,"1 nonsynonymous","S19T",1
"lib1","SARS-CoV-2","ATATATTATCCACTAA",1,68.37,9.88,-0.88,0.07,2.28,1.03,0,"1 nonsynonymous","V181A",1
"lib1","SARS-CoV-2","ATATATTCGAAAAGCC",9,0.8,NA,NA,NA,NA,NA,NA,"stop","A42* N58F D90Y D97T",4
"lib1","SARS-CoV-2","ATATATTCGAGCTCAA",11,109.16,6.46,-4.3,0.47,1.5,1.15,0.02,">1 nonsynonymous","F8G Y121V",2
"lib1","SARS-CoV-2","ATATATTCGTAAAATG",6,110.94,10.79,0.03,0.07,2.89,1.07,0,">1 nonsynonymous","I28L K56S",2
"lib1","SARS-CoV-2","ATATATTCTGCCCATT",3,24.8,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N58C V103M Y119V",3
"lib1","SARS-CoV-2","ATATATTGATCTCTCT",3,103.34,8.92,-1.84,0.14,1.82,1.18,0.01,">1 nonsynonymous","D34R N120D G155L",3
"lib1","SARS-CoV-2","ATATATTTAGCAAAAT",5,18.66,10.51,-0.26,0.13,2.82,1,0.01,">1 nonsynonymous","T3F A42P D90K",3
"lib1","SARS-CoV-2","ATATATTTGAGGTCGG",2,28.34,8.24,-2.52,0.28,1.5,1.1,0.04,">1 nonsynonymous","T3H D97T K132T Y143S",4
"lib1","SARS-CoV-2","ATATATTTGGGACACT",9,0.37,NA,NA,NA,NA,NA,NA,"stop","F44R Y66* E135P G166V",4
"lib1","SARS-CoV-2","ATATATTTTAACTTGC",4,38.29,10.11,-0.65,0.12,2.44,1.03,0.01,">1 nonsynonymous","F17M V37D I138L A190V",4
"lib1","SARS-CoV-2","ATATCAAAAACAATTG",3,41.39,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T55L L95S A105L L125P S139K",5
"lib1","SARS-CoV-2","ATATCAAAAACTAAAC",1,12.22,9.07,-1.69,0.15,2.68,1.33,0.01,">1 nonsynonymous","N118S G174M",2
"lib1","SARS-CoV-2","ATATCAAAATTCTATG",1,39.58,10.01,-0.76,0.11,1.92,1.03,0,">1 nonsynonymous","D98Y K128L S184F T201N",4
"lib1","SARS-CoV-2","ATATCAAACTCATGCC",5,33.88,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K94T V103W",2
"lib1","SARS-CoV-2","ATATCAAATCCATATA",2,54.4,8.8,-1.97,0.11,2.58,1.08,0,">1 nonsynonymous","A89V T170M",2
"lib1","SARS-CoV-2","ATATCAACAAACAATA",5,29.88,9.07,-1.69,0.36,1.5,1,0.06,">1 nonsynonymous","D90I W106M",2
"lib1","SARS-CoV-2","ATATCAACGAAGGACA",7,128.4,7.66,-3.11,0.12,1.88,1.14,0,">1 nonsynonymous","V37Q Y119F I142G",3
"lib1","SARS-CoV-2","ATATCAACTCCTTAAA",9,131.21,10.1,-0.67,0.04,2.65,1.02,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","ATATCAACTTCTCATT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","T3S N13Y V20M I28S D90E D97T T148H Q176*",8
"lib1","SARS-CoV-2","ATATCAAGAGGAACAC",5,58.2,11.02,0.25,0.09,2.92,1.04,0,"1 nonsynonymous","Q163V",1
"lib1","SARS-CoV-2","ATATCAAGGCACAAAT",1,101.13,10.59,-0.18,0.06,2.86,1.02,0,">1 nonsynonymous","E141W T201N",2
"lib1","SARS-CoV-2","ATATCAAGGTACCGCT",3,52.24,9.89,-0.88,0.14,2.18,1.03,0.01,">1 nonsynonymous","E10V F44S K199N",3
"lib1","SARS-CoV-2","ATATCAATAAAAAATG",1,37.63,10.08,-0.69,0.12,2.68,1.01,0.01,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","ATATCAATACCGCAAA",2,58.45,10.19,-0.58,0.04,2.95,1,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","ATATCAATGCAAGTAT",3,51.64,8.53,-2.23,0.41,1.5,1.06,0.07,">1 nonsynonymous","N4S I28A V37S N110T I142C",5
"lib1","SARS-CoV-2","ATATCAATTGTAGCGG",4,346.09,8.68,-2.08,0.09,2.85,1.06,0,">1 nonsynonymous","L122D T170L T201Y",3
"lib1","SARS-CoV-2","ATATCACACCCCGAAA",2,20.78,9.29,-1.48,0.32,1.55,1.36,0.04,">1 nonsynonymous","C61W A105Y I138F",3
"lib1","SARS-CoV-2","ATATCACATGGTTTTA",19,1.91,NA,NA,NA,NA,NA,NA,"stop","L5D A14L V37T I142* T201N",5
"lib1","SARS-CoV-2","ATATCACCATATAATA",9,121.61,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","L5W V103C E135D Q176R",4
"lib1","SARS-CoV-2","ATATCACCTGTTAGAA",13,176.08,6.12,-4.65,0.44,1.5,1.15,0.01,">1 nonsynonymous","L5S F17S V37G L95P Y119P",5
"lib1","SARS-CoV-2","ATATCACGCTACAAAG",1,15.12,6,-4.76,2,2.07,1.08,0.01,">1 nonsynonymous","S41C L60V D68P S147T",4
"lib1","SARS-CoV-2","ATATCACGGGGACGAG",1,22.21,9.03,-1.73,0.15,1.91,1.08,0.01,">1 nonsynonymous","C61R T100R N107V L122H N130P",5
"lib1","SARS-CoV-2","ATATCACGGTGAGGCA",3,25.76,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N4R F62N F70S",3
"lib1","SARS-CoV-2","ATATCACTAACCTAGC",2,48.31,10,-0.76,0.06,2.62,1.08,0,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","ATATCACTTAAATGTC",2,94.45,10.49,-0.27,0.05,2.88,1.04,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","ATATCAGAATCGAAAT",4,80.58,9.22,-1.54,0.06,2.86,1.09,0,">1 nonsynonymous","Q84V G166Q",2
"lib1","SARS-CoV-2","ATATCAGCATTGGACA",6,10.47,6.75,-4.02,0.45,1.5,1.12,0.02,">1 nonsynonymous","N1H N13L D90G W106E R136I G152S",6
"lib1","SARS-CoV-2","ATATCAGCCCCATCTA",2,2.82,NA,NA,NA,NA,NA,NA,"stop","E10W S69M L95D A105E Y143V C150* Q176L",7
"lib1","SARS-CoV-2","ATATCAGCCGGTGGGA",2,54.95,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","N1S N64A N107Y",3
"lib1","SARS-CoV-2","ATATCAGCTTTGCTAT",3,57.83,10.62,-0.14,0.07,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATCAGGAATTTCTT",2,56.9,10.69,-0.08,0.03,2.93,1.04,0,"1 nonsynonymous","G152S",1
"lib1","SARS-CoV-2","ATATCAGTAACGACCA",3,26.04,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","P96W K114R S139A",3
"lib1","SARS-CoV-2","ATATCAGTCTAACCTG",7,79.05,7.39,-3.37,0.35,1.5,1.2,0.03,">1 nonsynonymous","C61S A89V L95V A145T",4
"lib1","SARS-CoV-2","ATATCAGTGCTCCTAT",5,16.38,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G51Y T63K C158T G166V",4
"lib1","SARS-CoV-2","ATATCAGTGGATAATA",4,69.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N40C Y91P F167L",3
"lib1","SARS-CoV-2","ATATCATACCACCAAA",4,0.99,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib1","SARS-CoV-2","ATATCATACCTGGCTA",5,31.86,10.81,0.04,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATCATACGAAGTAT",5,17.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52S Y91C E154G",3
"lib1","SARS-CoV-2","ATATCATACTATCTGG",12,80.52,8.42,-2.35,0.36,1.5,1.02,0.05,">1 nonsynonymous","P7L V37Q F44H L57W A105M",5
"lib1","SARS-CoV-2","ATATCATAGTTTGACG",3,20.09,10.25,-0.51,0.17,2.08,1.05,0.01,">1 nonsynonymous","L122K D137G",2
"lib1","SARS-CoV-2","ATATCATATAAGACAT",4,29.13,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6R S69K A81V I104A Q176G",5
"lib1","SARS-CoV-2","ATATCATCCTAAAATC",4,46.13,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y39T S43P Y93D Y121M",4
"lib1","SARS-CoV-2","ATATCATCCTCACGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G51V Q79S A89* E186C",4
"lib1","SARS-CoV-2","ATATCATCTAGCTAGT",1,77.36,10.31,-0.46,0.06,2.86,1.05,0,">1 nonsynonymous","T15M F160H",2
"lib1","SARS-CoV-2","ATATCATGACTACATA",1,20.1,6.31,-4.45,0.73,1.5,1.07,0.03,">1 nonsynonymous","C61N A105L N110V A145D N157A T201A",6
"lib1","SARS-CoV-2","ATATCATGATATGGGC",5,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q A33K Y123T",3
"lib1","SARS-CoV-2","ATATCATGCTTACTAA",9,0.76,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATCATGTAAATGAA",8,12.11,9.08,-1.69,0.28,1.83,1.29,0.03,">1 nonsynonymous","D90L V103T V173L T201K",4
"lib1","SARS-CoV-2","ATATCATTAAACCTTG",1,83.39,8.81,-1.96,0.12,2.56,1.17,0.01,">1 nonsynonymous","A33W K87V N107T K128A A145V",5
"lib1","SARS-CoV-2","ATATCATTATATTTAG",1,15.08,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","F47N P133T",2
"lib1","SARS-CoV-2","ATATCATTGATATAAG",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H P82Q P149R A190D",4
"lib1","SARS-CoV-2","ATATCATTTAAACTCA",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P A67F D90L N107G",4
"lib1","SARS-CoV-2","ATATCCAAAAAAGTTA",3,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T G101E G146H",3
"lib1","SARS-CoV-2","ATATCCAAAAATTATA",7,50.96,8.65,-2.12,0.2,1.5,1.18,0.02,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","ATATCCAAATATGACG",3,16.54,8.61,-2.16,0.26,1.5,1.06,0.02,">1 nonsynonymous","P54S R136P",2
"lib1","SARS-CoV-2","ATATCCACCAGACAGC",4,1.06,NA,NA,NA,NA,NA,NA,"stop","L5H P54R N107D E141*",4
"lib1","SARS-CoV-2","ATATCCACTACACTCA",6,77.84,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","V37M S43L D68L A89Q G101N R127T",6
"lib1","SARS-CoV-2","ATATCCAGACAGACAT",5,14.42,9.5,-1.27,0.28,1.95,1.09,0.04,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","ATATCCAGGCATGTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8*",1
"lib1","SARS-CoV-2","ATATCCAGGCTAAAGT",2,41.12,10.09,-0.67,0.09,2.38,1,0,">1 nonsynonymous","P7S R78K Y91G P197S",4
"lib1","SARS-CoV-2","ATATCCAGGTGGGCAA",3,43.31,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5V S108I V115T G146P N151S",5
"lib1","SARS-CoV-2","ATATCCAGTAGCCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S D90N F99L P177L",4
"lib1","SARS-CoV-2","ATATCCAGTTTTTATG",6,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E V103R N110V",3
"lib1","SARS-CoV-2","ATATCCATAAACGTAA",7,93.86,10.7,-0.06,0.04,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATCCATGATCTAAC",5,65.88,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","K87A S113D Y121R",3
"lib1","SARS-CoV-2","ATATCCATGCTGGCGA",9,86.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D59L I142K N157T",3
"lib1","SARS-CoV-2","ATATCCATGGAACAGG",4,84.41,10.62,-0.15,0.03,2.93,1.03,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","ATATCCCAAAATGTCT",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T F99R C150S",3
"lib1","SARS-CoV-2","ATATCCCACGCATTAA",11,127.69,10.63,-0.13,0.05,2.88,1.06,0,"1 nonsynonymous","A33F",1
"lib1","SARS-CoV-2","ATATCCCATACTCTCA",3,38.26,8.1,-2.67,0.22,1.87,1.12,0.02,">1 nonsynonymous","Y35G S53V G117V V173D",4
"lib1","SARS-CoV-2","ATATCCCATGTTTTCA",3,22.72,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T55W T85F W106D D137W T201A",5
"lib1","SARS-CoV-2","ATATCCCATTGAGGAA",8,109.45,10.18,-0.59,0.04,2.88,1,0,">1 nonsynonymous","C31Q F62Y",2
"lib1","SARS-CoV-2","ATATCCCCAACCACTT",1,14.82,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","K48L Y91G Y119R S184C G196L",5
"lib1","SARS-CoV-2","ATATCCCCAGTAAATT",3,64.68,7.66,-3.1,0.17,1.82,1.14,0.01,">1 nonsynonymous","I2M L60Y S113T E135A I142T",5
"lib1","SARS-CoV-2","ATATCCCCCTTCAAGC",4,54.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11F F99S K198R",3
"lib1","SARS-CoV-2","ATATCCCGATACAGGA",2,50.87,8.28,-2.48,0.23,1.51,1.16,0.02,">1 nonsynonymous","S43L D112F",2
"lib1","SARS-CoV-2","ATATCCCGCAACATAA",2,81.51,10.24,-0.53,0.15,2.77,1.01,0.01,">1 nonsynonymous","S45P A190L",2
"lib1","SARS-CoV-2","ATATCCCGCCACTATT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","E10T W106*",2
"lib1","SARS-CoV-2","ATATCCCTCTGTACAA",1,6.74,9.86,-0.9,0.3,2.39,1.5,0.01,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","ATATCCCTTACCACTC",1,11.14,8.9,-1.87,0.19,2.69,1.04,0.01,">1 nonsynonymous","A22M N151P G152C",3
"lib1","SARS-CoV-2","ATATCCCTTATGAGAT",2,23.84,9.4,-1.36,0.11,2.47,1.19,0.01,">1 nonsynonymous","I2V G9V R73S N120D",4
"lib1","SARS-CoV-2","ATATCCGAAAACTTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133F P191Y",2
"lib1","SARS-CoV-2","ATATCCGACGAATTCC",2,38.71,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S19L F99I K199V",3
"lib1","SARS-CoV-2","ATATCCGAGTTGAAAG",5,16.17,9.93,-0.83,0.32,1.62,1.1,0.04,">1 nonsynonymous","S41V N58M G83I",3
"lib1","SARS-CoV-2","ATATCCGCAAGTGATG",7,113.35,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","F70I",1
"lib1","SARS-CoV-2","ATATCCGCATGGAAGG",2,34.74,10.85,0.08,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATCCGCGTGATATC",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C V52T Y119H G146W",4
"lib1","SARS-CoV-2","ATATCCGCTAGCACCG",3,170.94,10.65,-0.12,0.04,2.92,1,0,">1 nonsynonymous","E141M T148R",2
"lib1","SARS-CoV-2","ATATCCGCTTGACGGG",5,0.24,NA,NA,NA,NA,NA,NA,"stop","N107P L131*",2
"lib1","SARS-CoV-2","ATATCCGGAACCCACT",10,159.7,7.65,-3.11,0.22,1.5,1.19,0.01,">1 nonsynonymous","N58L Q176R",2
"lib1","SARS-CoV-2","ATATCCGTATGATTAA",4,141.81,10.02,-0.74,0.09,2.16,1.03,0,">1 nonsynonymous","F44A T85W T201D",3
"lib1","SARS-CoV-2","ATATCCGTGAACGAAG",7,124.89,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S113M Y121S F156E",3
"lib1","SARS-CoV-2","ATATCCGTGGCCTCGA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","E186*",1
"lib1","SARS-CoV-2","ATATCCTAAGTTAGTC",5,6.36,NA,NA,NA,NA,NA,NA,"stop","I2C G9* Y121T P149L G155S G174R",6
"lib1","SARS-CoV-2","ATATCCTCATACCGCT",2,54.89,9.62,-1.14,0.06,2.65,1.13,0,">1 nonsynonymous","Y91F N110V N151H Q176M",4
"lib1","SARS-CoV-2","ATATCCTCGGTCCGCT",4,191.44,8.6,-2.16,0.11,2.9,1.07,0,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","ATATCCTTAACTTCAC",8,49.52,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","P96H E135S A145T P197L",4
"lib1","SARS-CoV-2","ATATCGAACCAAATGG",1,10.17,6.08,-4.68,0.8,1.5,1.01,0.03,">1 nonsynonymous","Y35K Y50S R179S",3
"lib1","SARS-CoV-2","ATATCGAACGATTCCT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","N107C Y143*",2
"lib1","SARS-CoV-2","ATATCGAACTTGGAAT",9,0.66,NA,NA,NA,NA,NA,NA,"stop","C6R S41* G152L",3
"lib1","SARS-CoV-2","ATATCGAATACAAAAA",4,33.75,10.47,-0.3,0.08,2.96,1.01,0,">1 nonsynonymous","T3D G174M",2
"lib1","SARS-CoV-2","ATATCGACCCAATCAA",14,4.48,NA,NA,NA,NA,NA,NA,"stop","I104* Y178K",2
"lib1","SARS-CoV-2","ATATCGAGCCCCTCAA",3,28.59,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","P82R I104L R127K",3
"lib1","SARS-CoV-2","ATATCGATAACCAAAT",5,67.33,10.66,-0.11,0.04,2.93,1.01,0,"1 nonsynonymous","A81R",1
"lib1","SARS-CoV-2","ATATCGATATGTATTA",5,0.43,NA,NA,NA,NA,NA,NA,"stop","Y39I A42T N157* Y175M",4
"lib1","SARS-CoV-2","ATATCGATGAAAAACC",3,17.72,6.39,-4.37,0.65,1.5,1.09,0.04,">1 nonsynonymous","D68M G101H S139D V173H P197A",5
"lib1","SARS-CoV-2","ATATCGCAAACTTATG",11,26.58,6.2,-4.57,1.45,1.5,1.27,0.06,">1 nonsynonymous","C49I V103A L122P",3
"lib1","SARS-CoV-2","ATATCGCACATTCAAT",13,222.9,9.99,-0.78,0.08,2.35,1.02,0,">1 nonsynonymous","I28S K128D S200H",3
"lib1","SARS-CoV-2","ATATCGCACCCGTAAG",1,54.02,9.72,-1.05,0.05,2.87,1.05,0,">1 nonsynonymous","N24R Y119A V173R",3
"lib1","SARS-CoV-2","ATATCGCCAACAAGAG",4,1.26,NA,NA,NA,NA,NA,NA,"stop","L95I P133* G146F",3
"lib1","SARS-CoV-2","ATATCGCGTGCCCGTT",2,9.48,6,-4.76,2,1.5,1.08,0,"1 nonsynonymous","D68R",1
"lib1","SARS-CoV-2","ATATCGCTACACCTAG",2,49.48,10.56,-0.21,0.03,2.97,1.01,0,">1 nonsynonymous","G116Q T148D",2
"lib1","SARS-CoV-2","ATATCGGAATTATATT",9,175.54,10.73,-0.04,0.05,2.9,1.06,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","ATATCGGCCACCGCAT",9,35.01,6,-4.76,1.98,1.5,1.18,0.01,">1 nonsynonymous","G152N Y175D V181P",3
"lib1","SARS-CoV-2","ATATCGGCGATGGATT",5,75.44,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","E10F Y35T T46I G51T Y91W D98S L162M",7
"lib1","SARS-CoV-2","ATATCGGTCAACGATT",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136M S200T",2
"lib1","SARS-CoV-2","ATATCGGTTGTTCAGC",3,67.95,10,-0.76,0.08,2.68,1.06,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","ATATCGTAAAATGCTT",1,14.24,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","Y93F V115L F156L F167N",4
"lib1","SARS-CoV-2","ATATCGTAGCTAAACC",3,39.2,10.71,-0.06,0.06,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATCGTTACCTGTTC",8,135.91,10.87,0.1,0.07,2.96,1,0,"1 nonsynonymous","K198F",1
"lib1","SARS-CoV-2","ATATCGTTGGTGTAAA",3,9.78,10.27,-0.49,0.18,2.73,1,0.01,">1 nonsynonymous","S41K F47L D97L E141M",4
"lib1","SARS-CoV-2","ATATCTAAACAAATGA",1,10.56,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","P7D D68P G86C",3
"lib1","SARS-CoV-2","ATATCTAAGGAAGAGT",1,25.74,10.82,0.06,0.11,2.82,1.04,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","ATATCTAAGGGTCTGG",2,7.04,8.3,-2.46,0.38,1.8,1.28,0.07,">1 nonsynonymous","G9T T15R A105C P149K",4
"lib1","SARS-CoV-2","ATATCTAATCTGTATT",2,18.62,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","C6K S43Y D75L R127L T148N N151S",6
"lib1","SARS-CoV-2","ATATCTACAATACGTA",9,96.03,10.61,-0.15,0.05,2.87,1.04,0,"1 nonsynonymous","K26Y",1
"lib1","SARS-CoV-2","ATATCTACGAAACATT",5,69.69,10.1,-0.66,0.06,2.79,1.06,0,">1 nonsynonymous","C61L T85L",2
"lib1","SARS-CoV-2","ATATCTACTAAGGTAT",1,55.45,9.96,-0.8,0.07,2.82,1.06,0,">1 nonsynonymous","N4G G155F",2
"lib1","SARS-CoV-2","ATATCTACTTGTATAG",4,34.01,6,-4.76,2,3,1.18,0,">1 nonsynonymous","F8T Y35N S139L I142K",4
"lib1","SARS-CoV-2","ATATCTAGACCTACAT",3,47.55,9.33,-1.43,0.17,1.95,1.06,0.01,">1 nonsynonymous","S69L G83S K87T",3
"lib1","SARS-CoV-2","ATATCTAGGCAAACGG",4,60.93,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N24S P54C R78G Y121T T140W F160C",6
"lib1","SARS-CoV-2","ATATCTATATAGATGC",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A A67N L95A V103F G146P",5
"lib1","SARS-CoV-2","ATATCTATTGATGACA",7,83.34,8.67,-2.09,0.08,2.96,1.04,0,">1 nonsynonymous","Y123R E154Y",2
"lib1","SARS-CoV-2","ATATCTCAACACGGAG",5,31.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V71T I104L S113L L125I V181G",5
"lib1","SARS-CoV-2","ATATCTCAATATAAAG",12,104.81,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2K Y39V F167S T201N",4
"lib1","SARS-CoV-2","ATATCTCAATTGGAAA",3,40.07,6,-4.76,1.58,1.5,1.16,0.01,">1 nonsynonymous","C31L Y91G P161L",3
"lib1","SARS-CoV-2","ATATCTCCAAATAGAT",5,44.13,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V37D V103L K114E Q163K V182P",5
"lib1","SARS-CoV-2","ATATCTCCCGACACCC",2,10.41,10.6,-0.17,0.11,3,1.01,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ATATCTCTATGCCATC",2,12.29,NA,NA,NA,NA,NA,NA,"stop","K26* G74P S200V",3
"lib1","SARS-CoV-2","ATATCTCTTCGATTGA",6,119.76,10.86,0.1,0.08,2.85,1.06,0,">1 nonsynonymous","A18K N171F",2
"lib1","SARS-CoV-2","ATATCTGAGCACAAAC",4,25.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L38H Y91L G101V N120R",4
"lib1","SARS-CoV-2","ATATCTGAGCCTTATC",4,63.5,10.54,-0.22,0.03,2.89,1.08,0,">1 nonsynonymous","C61A F134W",2
"lib1","SARS-CoV-2","ATATCTGGAACAACCA",5,36.5,10.73,-0.03,0.08,2.92,1.03,0,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","ATATCTGGATATCTTA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W D98C L131M Q144L G152T",5
"lib1","SARS-CoV-2","ATATCTGGCCTTTATC",7,89.14,10.05,-0.71,0.07,2.73,1.08,0,">1 nonsynonymous","R27K A105V",2
"lib1","SARS-CoV-2","ATATCTGGTTAGGAGA",8,177.7,10.24,-0.53,0.05,2.76,1.03,0,">1 nonsynonymous","A105W S164N",2
"lib1","SARS-CoV-2","ATATCTGTAACTGATC",6,120.28,10.47,-0.29,0.03,2.92,1.04,0,">1 nonsynonymous","L5N K114D",2
"lib1","SARS-CoV-2","ATATCTGTAGAGGAGG",4,5.94,9.39,-1.37,0.24,1.5,1.01,0.03,">1 nonsynonymous","A89L T201R",2
"lib1","SARS-CoV-2","ATATCTGTCTATTACC",1,2.89,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATCTTAAGTATCTG",9,298.42,10.7,-0.07,0.05,2.93,1.04,0,">1 nonsynonymous","T55A C61P",2
"lib1","SARS-CoV-2","ATATCTTCCTACGGAA",4,88.49,9.88,-0.89,0.09,2.03,1.04,0,">1 nonsynonymous","N30K K94Q",2
"lib1","SARS-CoV-2","ATATCTTCTCCATCTT",1,69.68,9.66,-1.1,0.04,2.88,1.05,0,">1 nonsynonymous","N4R F44N K128T",3
"lib1","SARS-CoV-2","ATATCTTGCGCCTTCT",18,6,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","ATATCTTGTATACATT",6,0.7,NA,NA,NA,NA,NA,NA,"stop","T55* G146* F156W",3
"lib1","SARS-CoV-2","ATATCTTTCCACCTAA",6,58.86,9.94,-0.83,0.06,2.85,1.04,0,">1 nonsynonymous","F47M G155D",2
"lib1","SARS-CoV-2","ATATGAAAAAGGAGGA",5,74.52,10.76,0,0.07,2.86,1.09,0,">1 nonsynonymous","Q163T K199E",2
"lib1","SARS-CoV-2","ATATGAAAAATATCAT",7,124.04,10.73,-0.04,0.07,2.83,1.08,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","ATATGAAAATTAATAT",3,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E A105E H189Y",3
"lib1","SARS-CoV-2","ATATGAAACCCCGCTA",4,125.94,10.18,-0.58,0.09,2.37,1.02,0,">1 nonsynonymous","A33C W106R V173L",3
"lib1","SARS-CoV-2","ATATGAAACCGCGAGT",2,9.97,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A42T C49I G101H K199F",4
"lib1","SARS-CoV-2","ATATGAAACTATGGGG",2,0.33,NA,NA,NA,NA,NA,NA,"stop","T15* R27E C61S Y91C",4
"lib1","SARS-CoV-2","ATATGAAATATGAGAG",5,72.08,8.18,-2.58,0.27,1.5,1.11,0.03,">1 nonsynonymous","S41F S45R I104C Y119W",4
"lib1","SARS-CoV-2","ATATGAAATTAATTAA",3,37.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68K T85R R127A",3
"lib1","SARS-CoV-2","ATATGAAATTGAGAAG",5,129.04,10.68,-0.08,0.06,2.92,1.05,0,">1 nonsynonymous","V52Y V173K",2
"lib1","SARS-CoV-2","ATATGAACAACCTTCA",2,70.45,10.13,-0.64,0.03,2.94,1,0,"1 nonsynonymous","N118T",1
"lib1","SARS-CoV-2","ATATGAACAATGAGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W G83M L95C Q176V",4
"lib1","SARS-CoV-2","ATATGAACACTAATAA",3,45.19,10.61,-0.16,0.07,2.83,1.06,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","ATATGAACATGGGTCC",5,113.9,10.77,0,0.08,2.83,1.07,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ATATGAACATTACAGT",1,21.3,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G51R V115H P161H K199I",4
"lib1","SARS-CoV-2","ATATGAACCTGAAAAT",1,8.56,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","A33L L60P F99S S139Q G152D K198P",6
"lib1","SARS-CoV-2","ATATGAACTTTCGTTA",2,14.74,7.48,-3.28,0.38,1.5,1.03,0.06,">1 nonsynonymous","S41K D90T R124L T148P P161F",5
"lib1","SARS-CoV-2","ATATGAAGAACTAAAG",3,27.64,10.03,-0.73,0.11,2.1,1,0.01,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","ATATGAAGACTTAGGC",3,48.78,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","E76S L125P R136I",3
"lib1","SARS-CoV-2","ATATGAAGATAAAGTA",1,51.74,10.82,0.05,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATGAAGCGATAAAT",7,111.5,10.6,-0.17,0.04,2.89,1.05,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","ATATGAAGCTCATAAA",2,0.89,NA,NA,NA,NA,NA,NA,"stop","A42L C61* T170*",3
"lib1","SARS-CoV-2","ATATGAAGGAAATGTG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M G51R N92P F160V",4
"lib1","SARS-CoV-2","ATATGAAGGTTTGAAT",3,44.26,6.87,-3.89,0.23,1.5,1.15,0.01,">1 nonsynonymous","E10A S113Y L122T S129A G146S",5
"lib1","SARS-CoV-2","ATATGAATAGATATAC",2,57.76,10.72,-0.04,0.04,2.97,1.01,0,">1 nonsynonymous","L5R I142V T148I",3
"lib1","SARS-CoV-2","ATATGAATATTCAAAA",1,6.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59R G83L Y121S",3
"lib1","SARS-CoV-2","ATATGAATCCAACGTA",4,41.59,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44S G86W Y121Q",3
"lib1","SARS-CoV-2","ATATGAATCGACCAGG",4,47.69,10.66,-0.1,0.06,2.85,1.07,0,"1 nonsynonymous","R27F",1
"lib1","SARS-CoV-2","ATATGACAGCAAACCC",4,0.41,NA,NA,NA,NA,NA,NA,"stop","G51E F99* P133S F160R Y175N",5
"lib1","SARS-CoV-2","ATATGACCAGTACACT",1,41.99,10.03,-0.73,0.1,2.77,1.03,0,">1 nonsynonymous","T3V G9T G116S P149T",4
"lib1","SARS-CoV-2","ATATGACCCTAGCAAC",2,17.65,9.89,-0.88,0.12,2.24,1.06,0.01,"1 nonsynonymous","F47N",1
"lib1","SARS-CoV-2","ATATGACCCTATTCGA",3,11.54,6.93,-3.83,0.3,1.5,1.12,0.03,">1 nonsynonymous","L5V Q168C Q176K T201C",4
"lib1","SARS-CoV-2","ATATGACCTTAAAACG",4,0,NA,NA,NA,NA,NA,NA,"stop","W106* G152S",2
"lib1","SARS-CoV-2","ATATGACGAAGGGAAA",2,55.32,9.65,-1.11,0.11,1.96,1.09,0.01,">1 nonsynonymous","P54I R127M",2
"lib1","SARS-CoV-2","ATATGACGACACCTGT",6,0.31,NA,NA,NA,NA,NA,NA,"stop","I2L Y91T D112L R124K E141* S147*",6
"lib1","SARS-CoV-2","ATATGACGGATACAAA",4,19.69,6,-4.76,1.24,1.5,1.12,0.01,">1 nonsynonymous","K48P L95M",2
"lib1","SARS-CoV-2","ATATGACGGATGCTTA",6,66.02,10.26,-0.51,0.06,2.83,1,0,">1 nonsynonymous","R27V S36M T63V D98S V153N",5
"lib1","SARS-CoV-2","ATATGACGGATGGCAG",2,8.17,8.5,-2.26,0.15,1.54,1.08,0.01,">1 nonsynonymous","L60N K94N T140Q S164Y A192F",5
"lib1","SARS-CoV-2","ATATGACGTATCAGGC",6,9.81,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","D90G F160A V180S",3
"lib1","SARS-CoV-2","ATATGACGTCTTATAA",2,15.86,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","Y21L S45T F70N V103G",4
"lib1","SARS-CoV-2","ATATGACGTTAGTAAC",1,45.2,10.44,-0.32,0.08,2.89,1.02,0,">1 nonsynonymous","A42V G152L",2
"lib1","SARS-CoV-2","ATATGACTATAAGATT",3,17.84,6.44,-4.32,0.39,1.5,1.08,0.01,">1 nonsynonymous","K56Y N64R K87L F167L",4
"lib1","SARS-CoV-2","ATATGACTGCCGAACA",3,81.06,10.43,-0.34,0.05,2.9,1.01,0,">1 nonsynonymous","N1G E10T T100K",3
"lib1","SARS-CoV-2","ATATGACTGCTGGACG",1,4.55,NA,NA,NA,NA,NA,NA,"stop","I104* S200E",2
"lib1","SARS-CoV-2","ATATGACTGTAAGTAC",3,34.38,8.82,-1.94,0.18,1.88,1.19,0.01,">1 nonsynonymous","Y91C G116M T148Y",3
"lib1","SARS-CoV-2","ATATGACTTAGGAGAA",3,0.44,NA,NA,NA,NA,NA,NA,"stop","C61* N92F R124P",3
"lib1","SARS-CoV-2","ATATGAGAAATATCCA",7,51.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9I S43P D59N A89N D112W",5
"lib1","SARS-CoV-2","ATATGAGAATTTCCAA",3,39.99,10.78,0.01,0.07,2.93,1.03,0,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","ATATGAGATCGTGGTT",1,23.43,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S41R S45G K48A K94F",4
"lib1","SARS-CoV-2","ATATGAGCCTAACAAA",9,209,6.12,-4.64,0.82,1.5,1.21,0.02,"1 nonsynonymous","Y175G",1
"lib1","SARS-CoV-2","ATATGAGGCGATAACA",2,50.76,10.66,-0.1,0.07,2.84,1.08,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","ATATGAGGTATCAAGA",2,18.79,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V71R W106R Y121L R136F",4
"lib1","SARS-CoV-2","ATATGAGTAACAGACC",2,25.8,6,-4.76,1.37,1.5,1.07,0,">1 nonsynonymous","S36M A89Y A105Y Y143A",4
"lib1","SARS-CoV-2","ATATGAGTAGCCTGCT",6,58.47,9.12,-1.64,0.25,1.5,1.08,0.03,">1 nonsynonymous","A105V P133F A190T",3
"lib1","SARS-CoV-2","ATATGAGTGCAGAGGA",1,42.96,10.67,-0.09,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATGAGTTCCTATCT",4,47.93,7.19,-3.57,0.2,1.5,1.09,0.01,">1 nonsynonymous","Y21W L38R S43T G83N T140H",5
"lib1","SARS-CoV-2","ATATGAGTTCTACGAA",1,20.11,10.71,-0.05,0.16,2.8,1.07,0.01,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","ATATGATAAAGCTGAC",2,59.69,10.72,-0.04,0.08,2.93,1.03,0,"1 nonsynonymous","V173A",1
"lib1","SARS-CoV-2","ATATGATAACCCGAGC",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W T55W",2
"lib1","SARS-CoV-2","ATATGATACCGTTAAT",1,0.58,NA,NA,NA,NA,NA,NA,"stop","F8* V103K Y119S",3
"lib1","SARS-CoV-2","ATATGATATAACCCCT",1,40.42,6.67,-4.09,0.32,1.5,1.2,0.01,">1 nonsynonymous","N4V L38F Y66C G116N G166K",5
"lib1","SARS-CoV-2","ATATGATCATAAGGAA",2,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84S G117R R136S T148N V181P",5
"lib1","SARS-CoV-2","ATATGATCCAATACAA",4,133.42,10.37,-0.4,0.04,2.86,1.05,0,">1 nonsynonymous","T85A D90Y T201G",3
"lib1","SARS-CoV-2","ATATGATCTTTTTTAC",4,32.44,9.41,-1.36,0.18,2.02,1.18,0.01,">1 nonsynonymous","G9T N107C F126L",3
"lib1","SARS-CoV-2","ATATGATGAAAATACC",3,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K A18E K56Q W106A Y123V",5
"lib1","SARS-CoV-2","ATATGATGACGTTCCT",8,80.28,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A22W S53L S69V W106I P169D",5
"lib1","SARS-CoV-2","ATATGATGATTTTAGC",2,7.49,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","L60P A67G P149I N157F K198E",5
"lib1","SARS-CoV-2","ATATGATGCATATCAA",6,182.57,10.73,-0.03,0.04,2.9,1.04,0,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","ATATGATGTAAAACTT",2,22.26,10.73,-0.03,0.08,2.99,1.01,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","ATATGATGTATCTAAG",6,241.17,10.64,-0.12,0.04,2.93,1.01,0,">1 nonsynonymous","P54H A105S",2
"lib1","SARS-CoV-2","ATATGATTATACTACC",3,106.93,10.72,-0.05,0.05,2.87,1.06,0,"1 nonsynonymous","N1F",1
"lib1","SARS-CoV-2","ATATGATTATGCTCCA",4,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58K A81P D90Y",3
"lib1","SARS-CoV-2","ATATGATTTTCGTTAC",9,119.27,10.18,-0.59,0.04,2.82,1.02,0,">1 nonsynonymous","A22T F160V",2
"lib1","SARS-CoV-2","ATATGCAAGAATAATA",3,46.35,9.8,-0.96,0.15,2.06,1.08,0.01,">1 nonsynonymous","Y35L N107R S139N",3
"lib1","SARS-CoV-2","ATATGCAATAAATTTA",3,42.46,10.63,-0.13,0.06,2.91,1.08,0,">1 nonsynonymous","T55K G174A",2
"lib1","SARS-CoV-2","ATATGCACAACTTATT",2,14.15,10.67,-0.09,0.13,2.87,1.01,0,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","ATATGCACAATACATC",10,5.22,NA,NA,NA,NA,NA,NA,"stop","R25S F70A I88G L125*",4
"lib1","SARS-CoV-2","ATATGCACAGACGGGG",2,22.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I80Q G146W",2
"lib1","SARS-CoV-2","ATATGCACCGACTAAG",2,20.54,10.82,0.05,0.13,2.89,1.04,0,"1 nonsynonymous","N64W",1
"lib1","SARS-CoV-2","ATATGCACTCTTCCAG",8,78.14,6,-4.76,1.45,1.5,1.21,0.03,">1 nonsynonymous","N64S K94W",2
"lib1","SARS-CoV-2","ATATGCATAAGGACTG",3,174.16,9.46,-1.3,0.16,1.61,1.13,0.01,">1 nonsynonymous","R27K S41T V173T K198D",4
"lib1","SARS-CoV-2","ATATGCATCAAGTACG",6,39.98,8.58,-2.19,0.1,2.5,1.05,0,">1 nonsynonymous","A14Y K87Y T170H",3
"lib1","SARS-CoV-2","ATATGCATCGAACGGC",4,78.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F70I I80N N92R N118L R124L",5
"lib1","SARS-CoV-2","ATATGCATGCGTCCAG",7,97.63,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","C61Y Y123E P133I G166H",4
"lib1","SARS-CoV-2","ATATGCATGGGACAAT",5,15.69,6.46,-4.3,0.12,2.7,1.05,0,">1 nonsynonymous","R73L L95P G174W L183D",4
"lib1","SARS-CoV-2","ATATGCCAATCTCCCT",6,61.51,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1S Y175M R179F",3
"lib1","SARS-CoV-2","ATATGCCATTGATTAT",2,24.47,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D112V R124S R136W F167R",4
"lib1","SARS-CoV-2","ATATGCCCTATTGTAT",1,48.78,10.98,0.22,0.06,2.89,1.02,0,">1 nonsynonymous","N24S S147N",2
"lib1","SARS-CoV-2","ATATGCCCTTAGGAAA",1,17.24,8.69,-2.07,0.26,1.71,1.2,0.02,">1 nonsynonymous","S129F F185P",2
"lib1","SARS-CoV-2","ATATGCCGAAAAATGC",4,11.59,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","V11N F70D N92L K132F",4
"lib1","SARS-CoV-2","ATATGCCTAACTAGAA",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N A81G A89K S164R T201M",5
"lib1","SARS-CoV-2","ATATGCCTCAGAACCT",6,53.1,10.06,-0.7,0.11,2.23,1,0,">1 nonsynonymous","C61V R127G",2
"lib1","SARS-CoV-2","ATATGCGAAATAACAT",6,8.63,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T3Q Y35M S41R P149L G152D V182E",6
"lib1","SARS-CoV-2","ATATGCGAACCCTTTT",1,63.64,10.78,0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATGCGAATAGTATG",3,44.05,10.18,-0.59,0.06,2.86,1.01,0,">1 nonsynonymous","D97P N120H S139H",3
"lib1","SARS-CoV-2","ATATGCGCGATCCTAG",4,33.36,9.33,-1.43,0.24,1.62,1.17,0.02,">1 nonsynonymous","D90V E141S G152A",3
"lib1","SARS-CoV-2","ATATGCGGACGATGAT",4,95.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86M A105T F160V T170K",4
"lib1","SARS-CoV-2","ATATGCGGATAAATAA",10,48.25,6,-4.76,2,3,1.2,0,">1 nonsynonymous","L5F N64E F99S P133T G152S T201I",6
"lib1","SARS-CoV-2","ATATGCGGGAACACCC",2,21.14,10.84,0.08,0.13,2.79,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATGCGTGAGAATCT",3,53.61,10.53,-0.23,0.32,1.71,1,0.05,">1 nonsynonymous","L38C C49W V77L Y93F",4
"lib1","SARS-CoV-2","ATATGCTCAATCAAGA",2,34.39,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","R25V L38T V52D",3
"lib1","SARS-CoV-2","ATATGCTCATAATATT",1,21.46,9.74,-1.03,0.15,2.03,1.11,0.01,">1 nonsynonymous","N107K P149I",2
"lib1","SARS-CoV-2","ATATGCTCATGAATCT",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C49P T63A G74P G86V N151R",6
"lib1","SARS-CoV-2","ATATGCTCCCGGGGTA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","V32G L95A L125V Q144*",4
"lib1","SARS-CoV-2","ATATGCTGGCGGGTTG",1,21.75,6.11,-4.66,1.03,1.5,1.15,0.04,">1 nonsynonymous","N64T E135S V182Q",3
"lib1","SARS-CoV-2","ATATGCTTAACACTGG",17,128.64,10.76,0,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATGCTTAGTCTACA",1,18.4,10.73,-0.04,0.13,2.76,1.11,0.01,"1 nonsynonymous","C61H",1
"lib1","SARS-CoV-2","ATATGCTTCAATCTTT",4,19.67,10.4,-0.37,0.07,2.89,1.06,0,">1 nonsynonymous","N120I Q163I",2
"lib1","SARS-CoV-2","ATATGCTTCAGGATTA",3,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y N40L C61L Y93S E154A G166R",6
"lib1","SARS-CoV-2","ATATGCTTTAAAACGG",2,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V Y50I L57R",3
"lib1","SARS-CoV-2","ATATGGAAATTAAGCC",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S D90K V103A",3
"lib1","SARS-CoV-2","ATATGGAACACTTTTA",3,63.96,8.92,-1.85,0.33,1.5,1,0.06,">1 nonsynonymous","V32S L57V D97S P133T",4
"lib1","SARS-CoV-2","ATATGGAAGTCTCGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F L60E G86V Y119Q V194I",5
"lib1","SARS-CoV-2","ATATGGAATAAGTTGG",1,5.41,9.61,-1.15,0.37,1.5,1,0.04,">1 nonsynonymous","L95I R127H N151S",3
"lib1","SARS-CoV-2","ATATGGAATGGTCTAG",3,59.2,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K48Y Y93R V103M A145S F160N G166H",6
"lib1","SARS-CoV-2","ATATGGACACGCCAGT",2,7.51,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C49R T55F N107A P149S K198N",5
"lib1","SARS-CoV-2","ATATGGACTTCTGTTT",2,121.29,10.68,-0.08,0.05,2.92,1.03,0,">1 nonsynonymous","N40S P149S",2
"lib1","SARS-CoV-2","ATATGGAGGGATGAGA",6,1.51,NA,NA,NA,NA,NA,NA,"stop","Y35A A67N G86T Y165* L183M",5
"lib1","SARS-CoV-2","ATATGGAGTCGATAAC",4,30.81,6.31,-4.46,0.97,1.5,1.2,0.03,">1 nonsynonymous","C6V F12L A89T P149E Q176K",5
"lib1","SARS-CoV-2","ATATGGATCATTATGT",2,6.7,10.77,0,0.12,2.59,1.37,0,">1 nonsynonymous","R16L S43H N109L",3
"lib1","SARS-CoV-2","ATATGGCACCTCATCC",1,8.16,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K48Y D98L G152W",3
"lib1","SARS-CoV-2","ATATGGCCATAAATGC",6,74.54,9.97,-0.79,0.05,2.95,1.01,0,">1 nonsynonymous","Y119R E141V T201S",3
"lib1","SARS-CoV-2","ATATGGCGATGGCAAA",6,87.76,10.78,0.01,0.1,2.89,1.05,0,">1 nonsynonymous","L122V K128P",2
"lib1","SARS-CoV-2","ATATGGCGATTACTGC",3,38.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y R16G P54T W106M",4
"lib1","SARS-CoV-2","ATATGGGATAGCCGAA",6,14.79,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5S L38G T85A D98L D112L F156D S164Y",7
"lib1","SARS-CoV-2","ATATGGTAAAATAGTA",4,0.12,NA,NA,NA,NA,NA,NA,"stop","P7Y A14* I88A Y119Q Q144*",5
"lib1","SARS-CoV-2","ATATGGTAAATGTGTT",2,7.24,6.6,-4.17,1.53,3,1.05,0,">1 nonsynonymous","D90N F99S F160V",3
"lib1","SARS-CoV-2","ATATGGTATGCGTCAT",4,5.26,NA,NA,NA,NA,NA,NA,"stop","F44L L95* F160Y R179K F185S",5
"lib1","SARS-CoV-2","ATATGGTCTACCTCAA",1,61.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36V A89L E141H",3
"lib1","SARS-CoV-2","ATATGGTTAGCTGCCT",1,12.81,7.12,-3.64,0.34,3,1.12,0.02,">1 nonsynonymous","F12Q C158R",2
"lib1","SARS-CoV-2","ATATGGTTTACTTATT",1,14.76,10.05,-0.72,0.25,1.81,1.2,0.02,">1 nonsynonymous","P7R I104S",2
"lib1","SARS-CoV-2","ATATGTAAAAAACTAC",1,20.36,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","A14M C61M I88G I142D",4
"lib1","SARS-CoV-2","ATATGTAAAAATAGGG",3,42.62,10.31,-0.46,0.16,2.63,1,0.01,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","ATATGTAAAACAAACT",3,2.25,NA,NA,NA,NA,NA,NA,"stop","T3P C49L T63* S164T",4
"lib1","SARS-CoV-2","ATATGTAAAATGGTCA",2,35.94,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2Y Q79V N120T G155S",4
"lib1","SARS-CoV-2","ATATGTAAATAAGAGG",4,109.41,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","N4L V11Y Y35F P54E V65I C102R T201G",7
"lib1","SARS-CoV-2","ATATGTAATAATTTAA",2,14.8,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","W23G C31F D34Q D97N L125S E135A",6
"lib1","SARS-CoV-2","ATATGTAATTAAGAAT",8,107.31,6,-4.76,1.84,1.5,1.15,0.01,">1 nonsynonymous","T3P L60W I142E Q176K",4
"lib1","SARS-CoV-2","ATATGTACACAACTTT",7,112.89,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","G172K",1
"lib1","SARS-CoV-2","ATATGTACTCTACCAA",7,3.6,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","ATATGTAGGTCAGGAA",2,55.36,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F44D K56G D68R G83T I104S I138T",6
"lib1","SARS-CoV-2","ATATGTATACATATCA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S S129D",2
"lib1","SARS-CoV-2","ATATGTATACTATCCA",3,30.73,6.27,-4.5,0.63,1.95,1.22,0.02,">1 nonsynonymous","W106R R124Q",2
"lib1","SARS-CoV-2","ATATGTATACTCGCCG",2,101.71,8.07,-2.69,0.13,2.25,1.13,0.01,">1 nonsynonymous","T46Q N151T Y175A",3
"lib1","SARS-CoV-2","ATATGTATGCGTTTGC",6,2.17,NA,NA,NA,NA,NA,NA,"stop","N40F I138*",2
"lib1","SARS-CoV-2","ATATGTCAGATGACAA",2,53.51,10.61,-0.16,0.05,2.9,1.05,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","ATATGTCAGGATGCTA",1,40.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K48P P54S",2
"lib1","SARS-CoV-2","ATATGTCATAATATAT",5,86.81,10.81,0.04,0.08,2.87,1.1,0,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","ATATGTCCTACAATGA",3,48.7,10.68,-0.09,0.09,2.86,1.1,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","ATATGTCTAATAACAA",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K F12R T100G",3
"lib1","SARS-CoV-2","ATATGTCTAATTGAGA",1,11.21,10.73,-0.04,0.13,2.92,1.02,0.01,">1 nonsynonymous","N130Q Q144G",2
"lib1","SARS-CoV-2","ATATGTGCCCGTACAA",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S W106G F134P",3
"lib1","SARS-CoV-2","ATATGTGCTAAAGATG",7,191.19,7.07,-3.69,0.15,1.56,1.15,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","ATATGTGGACTGGGGA",5,88.57,10.1,-0.66,0.05,2.91,1.02,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","ATATGTGGATCAAGCG",1,4.62,NA,NA,NA,NA,NA,NA,"stop","N4L E10R Y21R S53V G86S G101D K128* G155R Q168W",9
"lib1","SARS-CoV-2","ATATGTGTATGTTTTA",8,50.69,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D68T N157L",2
"lib1","SARS-CoV-2","ATATGTGTCACTAAGG",4,44.14,9.94,-0.83,0.17,2.26,1.07,0.01,">1 nonsynonymous","K48N Y175W Q176K",3
"lib1","SARS-CoV-2","ATATGTTAAGAACAAT",6,80.18,10.64,-0.13,0.05,2.92,1.03,0,"1 nonsynonymous","P191Y",1
"lib1","SARS-CoV-2","ATATGTTATACAACGA",2,47.61,8.86,-1.91,0.05,2.82,1.13,0,">1 nonsynonymous","N120P Q168E T201Y",3
"lib1","SARS-CoV-2","ATATGTTATAGCGAAG",2,77.27,8.68,-2.08,0.12,2.67,1.07,0,">1 nonsynonymous","A42P L60M Y91I Y119T I138M T148D",6
"lib1","SARS-CoV-2","ATATGTTATTCTGTAG",2,11.8,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","T55H G101R S139D",3
"lib1","SARS-CoV-2","ATATGTTCAGAATTAT",1,0.74,NA,NA,NA,NA,NA,NA,"stop","E10I S41* N110G S184P",4
"lib1","SARS-CoV-2","ATATGTTTCTATCTAT",1,21.39,10.43,-0.34,0.17,2.57,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATATGTTTGGAGACTA",5,26.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","E10H K94C S113R",3
"lib1","SARS-CoV-2","ATATGTTTTCTCGAAT",1,27.2,10.81,0.05,0.04,2.91,1.03,0,">1 nonsynonymous","N1P P169T",2
"lib1","SARS-CoV-2","ATATGTTTTTACTACC",1,6.27,9.26,-1.5,0.31,1.5,1,0.05,">1 nonsynonymous","V77G T201M",2
"lib1","SARS-CoV-2","ATATTAAAACGAGAAC",1,49.87,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T3S L38S D98G I138Q",4
"lib1","SARS-CoV-2","ATATTAAAATAGGAAC",3,70.14,8.86,-1.91,0.18,1.89,1.14,0.01,">1 nonsynonymous","N110W P161T",2
"lib1","SARS-CoV-2","ATATTAAAATATTATC",7,44.72,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55Y D97L C102W P149C V173E",5
"lib1","SARS-CoV-2","ATATTAAACTACAGAA",4,37.39,8.14,-2.62,0.18,2.34,1.12,0.01,">1 nonsynonymous","C6A L125H Y143V",3
"lib1","SARS-CoV-2","ATATTAAACTTAGTAT",4,23.27,10.66,-0.11,0.05,2.98,1.02,0,">1 nonsynonymous","E10A S36K Y123K",3
"lib1","SARS-CoV-2","ATATTAAAGAACATCT",2,11.17,10.85,0.08,0.06,2.96,1,0,">1 nonsynonymous","L5M K199N",2
"lib1","SARS-CoV-2","ATATTAAAGTGGTTCC",2,26.79,8.53,-2.24,0.09,2.94,1.01,0,">1 nonsynonymous","A14S N24S N58M Y119E",4
"lib1","SARS-CoV-2","ATATTAAATCATCCCA",1,211.94,6.37,-4.4,0.42,1.5,1.13,0.01,">1 nonsynonymous","S19L S43G S164M",3
"lib1","SARS-CoV-2","ATATTAAATCCCACAC",6,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L V103G C158G",3
"lib1","SARS-CoV-2","ATATTAAATGATAGGA",2,1.55,NA,NA,NA,NA,NA,NA,"stop","T100V T140*",2
"lib1","SARS-CoV-2","ATATTAACAAACTTAC",3,18.82,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N24W D34Y N58I G101Q I142A",5
"lib1","SARS-CoV-2","ATATTAACACATTTAG",5,101.12,10.84,0.08,0.08,2.83,1.11,0,"1 nonsynonymous","Y35W",1
"lib1","SARS-CoV-2","ATATTAACCAAGCTTT",7,17.56,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","V180Q",1
"lib1","SARS-CoV-2","ATATTAACCATATATG",2,10.79,9.49,-1.27,0.17,1.74,1.14,0.02,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","ATATTAACCGAATGGG",5,43.41,6,-4.76,2,3,1.11,0,">1 nonsynonymous","D68L L187Q",2
"lib1","SARS-CoV-2","ATATTAACGCTCATGA",5,90.38,10.61,-0.15,0.06,2.87,1.07,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","ATATTAACTAATTATT",6,24.13,11.06,0.29,0.07,2.87,1.08,0,"1 nonsynonymous","N171F",1
"lib1","SARS-CoV-2","ATATTAACTTTGTGGA",1,13.15,10.98,0.22,0.11,2.9,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATATTAAGAACACATA",1,32.66,10.79,0.03,0.07,2.91,1.04,0,">1 nonsynonymous","R16I S139D",2
"lib1","SARS-CoV-2","ATATTAAGAATAAAAA",5,2.25,NA,NA,NA,NA,NA,NA,"stop","R25L S41T K114* Y119H F167P",5
"lib1","SARS-CoV-2","ATATTAAGATTCCCCA",3,37.87,10.76,0,0.1,2.85,1.08,0,">1 nonsynonymous","V37M F62L V115L Q168W",4
"lib1","SARS-CoV-2","ATATTAAGCCGTATCG",7,71.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74A A105V E141G",3
"lib1","SARS-CoV-2","ATATTAAGCTAAGTTT",3,44.86,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3V V37Y F99V C158I",4
"lib1","SARS-CoV-2","ATATTAAGGCCACCAT",1,27.6,10.66,-0.1,0.05,2.93,1.05,0,">1 nonsynonymous","V37Y E141S E154Q",3
"lib1","SARS-CoV-2","ATATTAAGGTCCCCAG",7,66.81,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","Y21A Y35Q K114V L122F G152R F156I",6
"lib1","SARS-CoV-2","ATATTAAGTAAGATCC",3,2.41,NA,NA,NA,NA,NA,NA,"stop","D97I G116L K199*",3
"lib1","SARS-CoV-2","ATATTAAGTTTTCTAT",1,13.16,6.97,-3.8,0.39,1.87,1.08,0.04,">1 nonsynonymous","C61V V77G S200I",3
"lib1","SARS-CoV-2","ATATTAATACGCAAAT",3,1.03,NA,NA,NA,NA,NA,NA,"stop","A89R Q144L N157* G174*",4
"lib1","SARS-CoV-2","ATATTAATATATTAAT",4,84,10.29,-0.48,0.06,2.8,1.07,0,">1 nonsynonymous","K56V I138P",2
"lib1","SARS-CoV-2","ATATTAATATTCATTA",2,52.2,10.01,-0.76,0.06,2.01,1.03,0,">1 nonsynonymous","V65L F99I T201H",3
"lib1","SARS-CoV-2","ATATTAATCAAGAAAC",2,29.8,9.5,-1.27,0.17,1.9,1.12,0.01,">1 nonsynonymous","F17L Y35S",2
"lib1","SARS-CoV-2","ATATTAATGAGTAAGG",3,32.44,10.61,-0.15,0.06,2.86,1.06,0,">1 nonsynonymous","I88V T201S",2
"lib1","SARS-CoV-2","ATATTAATTATTGGTA",1,7.47,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8I A42S I72P K128M",4
"lib1","SARS-CoV-2","ATATTAATTGCGACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10T R16* A67S Q84P P96K",5
"lib1","SARS-CoV-2","ATATTAATTTAAACTT",4,0.81,NA,NA,NA,NA,NA,NA,"stop","I72* V77D Y119N T201M",4
"lib1","SARS-CoV-2","ATATTAATTTGTAATA",1,82.93,10.48,-0.28,0.04,2.85,1.06,0,">1 nonsynonymous","K56S D98E K114I",3
"lib1","SARS-CoV-2","ATATTACAAGAGCTTG",1,33.47,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","V20K W23M S43Y P82S Y119I",5
"lib1","SARS-CoV-2","ATATTACACGCAAGTA",7,86.29,10.42,-0.35,0.04,2.9,1.01,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","ATATTACACGTATATC",1,26.66,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G74I T140S F167T",3
"lib1","SARS-CoV-2","ATATTACAGTATAGAC",2,0.45,NA,NA,NA,NA,NA,NA,"stop","I28* T63S V103S N120A",4
"lib1","SARS-CoV-2","ATATTACCCCCAAGGA",3,51.75,6,-4.76,1.62,1.5,1.16,0.02,">1 nonsynonymous","A33K N107F Y121F S200D",4
"lib1","SARS-CoV-2","ATATTACCCGACTAAG",8,66.72,10.52,-0.24,0.04,2.89,1.05,0,"1 nonsynonymous","E186A",1
"lib1","SARS-CoV-2","ATATTACGACTTGTTG",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V D98R N120S",3
"lib1","SARS-CoV-2","ATATTACGGACATAAC",6,163.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M A81V Y119L",3
"lib1","SARS-CoV-2","ATATTACGTATGGTAT",4,81.86,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V32T G83I R179P",3
"lib1","SARS-CoV-2","ATATTACGTATTTGCT",4,6.04,10.85,0.08,0.5,2.72,1,0.05,">1 nonsynonymous","K132T V173K",2
"lib1","SARS-CoV-2","ATATTACTAATAAACC",4,51.78,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F47Y P82V A105S L125Y",4
"lib1","SARS-CoV-2","ATATTACTATAATTTA",1,22.73,6.93,-3.84,0.45,1.5,1.1,0.05,">1 nonsynonymous","L95P Y119P",2
"lib1","SARS-CoV-2","ATATTACTCATAAATT",3,124.8,10.3,-0.47,0.05,2.88,1.02,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","ATATTACTGGGGGACA",10,89.01,9.79,-0.97,0.08,2.03,1.09,0,">1 nonsynonymous","T85S R136G",2
"lib1","SARS-CoV-2","ATATTACTTCTGAAAT",3,78.81,10.74,-0.02,0.05,2.93,1.02,0,"1 nonsynonymous","A192H",1
"lib1","SARS-CoV-2","ATATTAGAACGAAACT",3,1.68,NA,NA,NA,NA,NA,NA,"stop","V65D P82Y V103S G116* L122F G196V",6
"lib1","SARS-CoV-2","ATATTAGAAGATAGGT",3,5.08,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6S W23S L111F",3
"lib1","SARS-CoV-2","ATATTAGAGAGATGTC",5,101.17,9.71,-1.05,0.03,2.83,1.02,0,">1 nonsynonymous","A42F G166V",2
"lib1","SARS-CoV-2","ATATTAGAGTGATAGG",2,5.03,9.75,-1.01,0.46,2.08,1.02,0.05,">1 nonsynonymous","P7Y A33D Y66C K87N",4
"lib1","SARS-CoV-2","ATATTAGATTATAGTG",4,29.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I28F N107V D112F T148G",4
"lib1","SARS-CoV-2","ATATTAGATTTAAACT",2,43.97,9.61,-1.16,0.09,1.79,1.11,0,"1 nonsynonymous","I28K",1
"lib1","SARS-CoV-2","ATATTAGCAAGGTAAT",15,226.84,9.59,-1.17,0.1,1.83,1.08,0,">1 nonsynonymous","L38P F44W T63M",3
"lib1","SARS-CoV-2","ATATTAGCACAACTAT",1,18.59,10.79,0.02,0.17,2.79,1.09,0.01,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","ATATTAGCCAGGCGAT",3,24.66,8.9,-1.86,0.24,1.67,1.24,0.02,">1 nonsynonymous","F47G V77L",2
"lib1","SARS-CoV-2","ATATTAGCCGAAAAAT",1,28.02,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C6L I138L Q168P",3
"lib1","SARS-CoV-2","ATATTAGCGAACTACC",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S Y91L T170R",3
"lib1","SARS-CoV-2","ATATTAGCTTTTGCAC",9,36.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3F S45K V103C C150W",4
"lib1","SARS-CoV-2","ATATTAGGCTATTGTT",5,152.93,9.46,-1.3,0.04,2.81,1.08,0,">1 nonsynonymous","R78L T100Y N118S",3
"lib1","SARS-CoV-2","ATATTAGGCTCCTTAG",3,42.28,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6V S43D Y119L P149F Y159R H189G",6
"lib1","SARS-CoV-2","ATATTAGGTATACCTG",3,18.8,10.48,-0.28,0.09,2.62,1.18,0,">1 nonsynonymous","D98P I138L P149S",3
"lib1","SARS-CoV-2","ATATTAGTGTGCTTCA",4,22.71,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S41A L60M D98T Y143P",4
"lib1","SARS-CoV-2","ATATTATAAATACTAT",11,1.9,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib1","SARS-CoV-2","ATATTATAACCGCCAC",1,5.07,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","G152D F167A",2
"lib1","SARS-CoV-2","ATATTATAATGACCAA",5,105.02,9.58,-1.19,0.08,1.78,1.08,0,">1 nonsynonymous","P133L N151M",2
"lib1","SARS-CoV-2","ATATTATACCAACGTA",1,32.42,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","K56Y A89L T100Q T148A T201Q",5
"lib1","SARS-CoV-2","ATATTATACGAACAAT",1,47.29,8.37,-2.39,0.16,2.64,1.06,0.01,">1 nonsynonymous","F62W N107V Y119T",3
"lib1","SARS-CoV-2","ATATTATACTCTATAG",13,81.64,8.75,-2.02,0.11,1.69,1.17,0,">1 nonsynonymous","A33L T85K Y91Q S147Y",4
"lib1","SARS-CoV-2","ATATTATAGGATGACC",4,31.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","W106A I142N T170M Y178H",4
"lib1","SARS-CoV-2","ATATTATAGTATAAAA",7,57.13,10.37,-0.4,0.04,2.88,1.05,0,">1 nonsynonymous","F8Y A42S C61L P197G",4
"lib1","SARS-CoV-2","ATATTATATCACAATA",4,30.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8N L95Q G117V",3
"lib1","SARS-CoV-2","ATATTATATGTAAGCT",12,206.08,10.74,-0.03,0.05,2.89,1.06,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","ATATTATATGTTCTAT",4,62.64,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S19V F99M V153D",3
"lib1","SARS-CoV-2","ATATTATCACCTCATT",10,4.2,NA,NA,NA,NA,NA,NA,"stop","N157* Q168V",2
"lib1","SARS-CoV-2","ATATTATCCCATAGAA",1,47.12,6.36,-4.41,0.53,1.5,1.19,0.02,">1 nonsynonymous","Y39R V71N D97S",3
"lib1","SARS-CoV-2","ATATTATCCTCTCGAC",1,12.15,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","I88H F160E",2
"lib1","SARS-CoV-2","ATATTATCCTGCAATT",2,1.24,NA,NA,NA,NA,NA,NA,"stop","R25G Y39* C158A G172R P197K",5
"lib1","SARS-CoV-2","ATATTATGAGCTTTTG",1,12.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A S53C L122Y S200L",4
"lib1","SARS-CoV-2","ATATTATGCGAACGAC",3,53.04,9.28,-1.49,0.42,1.5,1,0.08,">1 nonsynonymous","C6G N40K N157S L183F",4
"lib1","SARS-CoV-2","ATATTATGGAAAAACG",2,0.53,NA,NA,NA,NA,NA,NA,"stop","I72S Y93P T170*",3
"lib1","SARS-CoV-2","ATATTATGTATCCAAT",5,32.71,9.97,-0.8,0.14,2.23,1.06,0.01,">1 nonsynonymous","R136F T148I",2
"lib1","SARS-CoV-2","ATATTATGTCAAAGAA",4,45.46,8.78,-1.99,0.24,1.5,1.16,0.02,">1 nonsynonymous","N40Y N107V",2
"lib1","SARS-CoV-2","ATATTATGTGCAGATT",4,48.98,10.71,-0.06,0.08,2.87,1.06,0,">1 nonsynonymous","S41M C61P S129R",3
"lib1","SARS-CoV-2","ATATTATGTTTCATCC",2,121.66,8.27,-2.49,0.13,2.46,1.09,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","ATATTATTACTCAAAC",3,36.67,10.21,-0.56,0.09,2.5,1,0,">1 nonsynonymous","D59M D97W R136K",3
"lib1","SARS-CoV-2","ATATTATTCCCCCCGT",2,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L D112H G146P",3
"lib1","SARS-CoV-2","ATATTATTGAAGAAGC",3,73.68,10.71,-0.05,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATATTATTGGGCCTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y121* N151C",2
"lib1","SARS-CoV-2","ATATTATTGGTTGATA",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N F99R N107I G174D",4
"lib1","SARS-CoV-2","ATATTCAAACAAAACA",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATTCAAACCATCGA",7,60.03,9.38,-1.39,0.14,1.64,1.15,0.01,">1 nonsynonymous","N64W P82I",2
"lib1","SARS-CoV-2","ATATTCAACGCGGAAA",6,61.73,10.68,-0.08,0.05,2.94,1.03,0,">1 nonsynonymous","P7D N171S",2
"lib1","SARS-CoV-2","ATATTCAAGGGAGGAC",8,15.59,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V65K G83I F99N V103P V173I",5
"lib1","SARS-CoV-2","ATATTCAATCGCCAGG",3,71.37,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y66S I138S C150S",3
"lib1","SARS-CoV-2","ATATTCAATGTGCTTA",4,52.74,9.96,-0.81,0.11,2.16,1.08,0,">1 nonsynonymous","V37Y F99L K199T",3
"lib1","SARS-CoV-2","ATATTCACAAGGGTTA",2,66.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9T D98K I104N",3
"lib1","SARS-CoV-2","ATATTCACAGCACTCA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N92* F126L K198N",3
"lib1","SARS-CoV-2","ATATTCACAGCGATAG",4,0.54,NA,NA,NA,NA,NA,NA,"stop","A22P S29M V71* A105K F185C",5
"lib1","SARS-CoV-2","ATATTCACGCGGAGAT",14,217.79,9.95,-0.82,0.08,2.11,1.04,0,">1 nonsynonymous","T63Y D90G L188I",3
"lib1","SARS-CoV-2","ATATTCACTATGTATG",8,394.8,10.14,-0.62,0.04,2.83,1.03,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","ATATTCAGCATATACC",4,32.28,10.12,-0.64,0.08,2.58,1.15,0,">1 nonsynonymous","T3P V37N S45Y",3
"lib1","SARS-CoV-2","ATATTCAGGATAGAGT",2,33.24,6.09,-4.68,1.31,1.5,1.16,0.03,">1 nonsynonymous","T3N P82H E141P N157Y",4
"lib1","SARS-CoV-2","ATATTCAGTATTAGAA",10,16.25,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","V103K",1
"lib1","SARS-CoV-2","ATATTCATAATCATCA",1,15.22,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88V V103L Q144F",3
"lib1","SARS-CoV-2","ATATTCATACCACACC",4,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I I88S G101T S113Y L122N I142L",6
"lib1","SARS-CoV-2","ATATTCATAGCGAAGG",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M L122E G146E V173P",4
"lib1","SARS-CoV-2","ATATTCATCGGCATTG",3,31.7,8.88,-1.89,0.1,2.74,1.12,0,"1 nonsynonymous","S113V",1
"lib1","SARS-CoV-2","ATATTCCAACGCTGTG",2,61.38,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F12D V37T N58S L125D",4
"lib1","SARS-CoV-2","ATATTCCACCGCATAT",1,87.29,10.25,-0.51,0.05,2.78,1,0,">1 nonsynonymous","S53T C61Y Y178N",3
"lib1","SARS-CoV-2","ATATTCCACTATAGGT",1,16.49,10.71,-0.06,0.09,2.9,1.08,0,">1 nonsynonymous","Y39F Q163H",2
"lib1","SARS-CoV-2","ATATTCCATCTTGCGT",5,158.1,10.76,-0.01,0.05,2.95,1.02,0,"1 nonsynonymous","L188R",1
"lib1","SARS-CoV-2","ATATTCCCAAAATTTT",6,1.54,NA,NA,NA,NA,NA,NA,"stop","T15N P54M L60* Y143D P169L",5
"lib1","SARS-CoV-2","ATATTCCCAGATCAAT",6,80.1,9.09,-1.67,0.09,2.68,1.09,0,">1 nonsynonymous","F99W G174I",2
"lib1","SARS-CoV-2","ATATTCCCATGTATTT",9,315.31,9.83,-0.93,0.1,2.3,1.04,0,">1 nonsynonymous","C61N W106L T201L",3
"lib1","SARS-CoV-2","ATATTCCCCAGAAATA",6,120.6,10.78,0.02,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTCCCCCACCTTC",3,87.49,8.38,-2.39,0.18,2.34,1.11,0.01,">1 nonsynonymous","A33R N110K L122S N157T G166N T201R",6
"lib1","SARS-CoV-2","ATATTCCGCGAATGTG",3,49.47,9.19,-1.57,0.1,2.52,1.07,0,">1 nonsynonymous","Y143L S184R",2
"lib1","SARS-CoV-2","ATATTCCGGAGAGTTA",1,72.67,10.8,0.03,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTCCGGTAATTGT",3,13.17,6.18,-4.58,0.34,1.5,1.05,0.01,">1 nonsynonymous","Y93R F99S",2
"lib1","SARS-CoV-2","ATATTCGAAATATACA",1,21.82,10.67,-0.1,0.08,2.89,1.05,0,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","ATATTCGACGATGCTA",1,40.08,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","D90C N107T",2
"lib1","SARS-CoV-2","ATATTCGCAACGGGCC",2,5.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19G Y50R L95M Y119E R136V S164A V173Q",7
"lib1","SARS-CoV-2","ATATTCGCGTGCAGAA",3,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T D59T N157F L162I",4
"lib1","SARS-CoV-2","ATATTCGGACTCTAAC",2,0.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","ATATTCGTAGCCCCAT",4,345.74,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44K D112W S200V",3
"lib1","SARS-CoV-2","ATATTCGTCACGACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S69* P82Q Y91I",3
"lib1","SARS-CoV-2","ATATTCGTTACCTGTA",8,36.1,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L122P K128R S139D",3
"lib1","SARS-CoV-2","ATATTCGTTGTCCCCT",1,19.36,9.66,-1.11,0.2,2,1.05,0.03,">1 nonsynonymous","N13F N58C S147D N151C",4
"lib1","SARS-CoV-2","ATATTCGTTGTTAATA",5,37.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D112L Y119V E141V H189Q",4
"lib1","SARS-CoV-2","ATATTCTAATTACAAG",2,22.26,9.54,-1.23,0.17,2.27,1,0.01,">1 nonsynonymous","T15D Y123E",2
"lib1","SARS-CoV-2","ATATTCTACAAATTAA",1,7.03,6.17,-4.6,0.55,3,1,0.02,">1 nonsynonymous","N13F K94T",2
"lib1","SARS-CoV-2","ATATTCTACCTGATTC",2,1.47,NA,NA,NA,NA,NA,NA,"stop","F12* N109G G117M K128L F160S",5
"lib1","SARS-CoV-2","ATATTCTAGTGGGTTA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATATTCTATTCGGTTA",8,5.4,NA,NA,NA,NA,NA,NA,"stop","S19M I28* T63A Y93K D98N P133R E141L G196K",8
"lib1","SARS-CoV-2","ATATTCTCGCCTTAAT",4,14.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G9A A81Y D90T V103L G172R",5
"lib1","SARS-CoV-2","ATATTCTCTCTAACCA",8,53.67,7.2,-3.56,0.36,1.5,1.01,0.05,">1 nonsynonymous","N120S R127E",2
"lib1","SARS-CoV-2","ATATTCTGAACTAAAC",1,21.95,10.04,-0.72,0.15,2.2,1.07,0.01,">1 nonsynonymous","L5A P54T D97H R127S T201R",5
"lib1","SARS-CoV-2","ATATTCTGCAACATGT",6,201.63,10.03,-0.74,0.05,2.9,1,0,">1 nonsynonymous","F12I N24T G174T",3
"lib1","SARS-CoV-2","ATATTCTGGCCCGTCC",10,8.88,NA,NA,NA,NA,NA,NA,"stop","F17S T55L W106G Y143* Y178S K198H",6
"lib1","SARS-CoV-2","ATATTCTGTACAACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66P P149R",2
"lib1","SARS-CoV-2","ATATTCTTCAAACTTG",4,43.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y35Q R124D Q163L",3
"lib1","SARS-CoV-2","ATATTGAAAAAAAAGA",2,53.38,10.63,-0.13,0.06,2.93,1.04,0,">1 nonsynonymous","F160W N171S",2
"lib1","SARS-CoV-2","ATATTGAACCGTTTCT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N4S L60T D98Y S139*",4
"lib1","SARS-CoV-2","ATATTGACAAAAGGTG",6,61.73,10.24,-0.53,0.09,2.32,1.05,0,">1 nonsynonymous","N4I I104C N120Q Q144N",4
"lib1","SARS-CoV-2","ATATTGACATTCGTGT",9,82.9,8.92,-1.85,0.14,1.5,1.1,0.01,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","ATATTGACGCCAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R D34M L57R S129*",4
"lib1","SARS-CoV-2","ATATTGACGGCCCATC",2,73.73,10.74,-0.02,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTGACTACATGAC",6,6.7,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N13Y I104M K132V Y143A P149G",5
"lib1","SARS-CoV-2","ATATTGATGCAAGCTG",3,61.04,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","Y21S R25F V37M G86W",4
"lib1","SARS-CoV-2","ATATTGATTTAGAAAC",10,98.04,9.52,-1.24,0.1,1.75,1.11,0,"1 nonsynonymous","Y50R",1
"lib1","SARS-CoV-2","ATATTGCAGAAGAATC",7,60.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T46M P82W F99Q Y121V V194A",5
"lib1","SARS-CoV-2","ATATTGCAGCAATACA",6,62.98,10.73,-0.04,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTGCCATGGATAC",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R P82N C102K",3
"lib1","SARS-CoV-2","ATATTGCCCTGGGAAG",5,118.42,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F8V W23S L122M S129M F167A",5
"lib1","SARS-CoV-2","ATATTGCGAAACCGAG",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C S53V I88R L95R S139T",5
"lib1","SARS-CoV-2","ATATTGCGCATCCATG",3,129.19,8.75,-2.02,0.12,2.13,1.1,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","ATATTGCTAACGCAAA",6,29.88,8.41,-2.35,0.19,1.85,1.2,0.01,">1 nonsynonymous","A42D C61S Y165L",3
"lib1","SARS-CoV-2","ATATTGCTAGTCTGGA",3,47.69,10.64,-0.13,0.1,2.83,1.09,0,">1 nonsynonymous","Y39F R78H",2
"lib1","SARS-CoV-2","ATATTGGAGCAGAAAA",1,29.05,9.97,-0.79,0.07,2.02,1.03,0,">1 nonsynonymous","P133L G196P",2
"lib1","SARS-CoV-2","ATATTGGCAAGGAAGT",12,52.3,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","G9T F99L W106P T201C",4
"lib1","SARS-CoV-2","ATATTGGCACGAATCG",4,51.29,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6I N107I N157C G166M",4
"lib1","SARS-CoV-2","ATATTGGCATTAAAGC",5,72.94,10.73,-0.04,0.07,2.9,1.06,0,">1 nonsynonymous","C61S A192E",2
"lib1","SARS-CoV-2","ATATTGGCGAGCCCTT",1,34.56,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","R25K S129V N151P G196I",4
"lib1","SARS-CoV-2","ATATTGGCTTTTCCAA",5,17.53,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","S53V L95H K114R",3
"lib1","SARS-CoV-2","ATATTGTAACCCATAA",10,38.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12S P96C",2
"lib1","SARS-CoV-2","ATATTGTATACGATGG",7,88.23,6,-4.76,1.79,1.5,1.2,0.01,">1 nonsynonymous","C6I F17T F44T N130E",4
"lib1","SARS-CoV-2","ATATTGTCACGTTGAC",7,10.87,7.66,-3.1,0.31,1.5,1.28,0.04,">1 nonsynonymous","N13P D34T P149S G172E",4
"lib1","SARS-CoV-2","ATATTGTCCATAGTTA",6,161.09,9.77,-0.99,0.08,2.59,1.07,0,"1 nonsynonymous","R179K",1
"lib1","SARS-CoV-2","ATATTGTCGGTATTAG",2,1.84,NA,NA,NA,NA,NA,NA,"stop","Y35R K56V Y123E F167*",4
"lib1","SARS-CoV-2","ATATTGTTAATTACCA",2,21.23,6.91,-3.85,0.35,1.5,1.13,0.04,">1 nonsynonymous","D68L N120L V180S",3
"lib1","SARS-CoV-2","ATATTGTTCATAATAT",2,5.39,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K94N I104T P161R P177T",4
"lib1","SARS-CoV-2","ATATTTAAAGACGTGT",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L Y35P R136Y",3
"lib1","SARS-CoV-2","ATATTTAACAACGCTA",3,53.96,8.27,-2.49,0.18,1.55,1.21,0.01,">1 nonsynonymous","E10Q R127L",2
"lib1","SARS-CoV-2","ATATTTAACACTCATT",1,65.3,10.61,-0.16,0.07,2.92,1.01,0,">1 nonsynonymous","D97R S129Y",2
"lib1","SARS-CoV-2","ATATTTAACTGTGTAA",5,0.43,NA,NA,NA,NA,NA,NA,"stop","C61R N92A P133* P191S",4
"lib1","SARS-CoV-2","ATATTTAAGCCTCCTT",4,1.42,NA,NA,NA,NA,NA,NA,"stop","Q84* P96S",2
"lib1","SARS-CoV-2","ATATTTAAGTATGACG",7,94.12,10.23,-0.54,0.03,2.92,1.03,0,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","ATATTTAATGCAACGT",3,69.48,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4I G86R R124Q T170S K198Q",5
"lib1","SARS-CoV-2","ATATTTAATGTAGATG",2,25.74,10.57,-0.19,0.08,2.8,1.08,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","ATATTTACAAGTACCA",1,18.35,10.74,-0.02,0.07,2.93,1.03,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","ATATTTACGAACTAAT",7,1.22,NA,NA,NA,NA,NA,NA,"stop","L5* N30K I104M T201S",4
"lib1","SARS-CoV-2","ATATTTACGTCACCAC",1,14.6,8.25,-2.52,0.16,2.35,1.08,0.01,">1 nonsynonymous","S41G T55P D98N Y143T",4
"lib1","SARS-CoV-2","ATATTTACGTTGCACC",1,8.26,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A14H A42D N64E E76R",4
"lib1","SARS-CoV-2","ATATTTAGAAACTACC",4,91.57,9.03,-1.73,0.18,1.5,1.15,0.01,">1 nonsynonymous","V103L K128T",2
"lib1","SARS-CoV-2","ATATTTAGGTACATAA",5,174.31,10.35,-0.42,0.07,2.94,1.02,0,">1 nonsynonymous","K87S T201K",2
"lib1","SARS-CoV-2","ATATTTATAATGAAAC",7,94.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36F C61I S69Q T85L F99S",5
"lib1","SARS-CoV-2","ATATTTATCAATCACA",4,2.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","ATATTTATCCAAGATT",12,5.05,NA,NA,NA,NA,NA,NA,"stop","E10D V65R K87Y Y123*",4
"lib1","SARS-CoV-2","ATATTTCAAATACCCA",6,54.46,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T85S Y93V G101D Y165D G166S",5
"lib1","SARS-CoV-2","ATATTTCAAATTAAAA",5,32.79,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","V11F N58V D90I Y143N",4
"lib1","SARS-CoV-2","ATATTTCAATGTCGAG",1,6.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49Y N92A S113V",3
"lib1","SARS-CoV-2","ATATTTCATAGCATGA",2,2.82,NA,NA,NA,NA,NA,NA,"stop","Y91E F185Y K199*",3
"lib1","SARS-CoV-2","ATATTTCATGCGCAAA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K D90Y",2
"lib1","SARS-CoV-2","ATATTTCCTCACGAAA",12,1.23,NA,NA,NA,NA,NA,NA,"stop","C6N Y35T L57E N64F L95H W106S V182T C195*",8
"lib1","SARS-CoV-2","ATATTTCCTCGCGGAT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","A89Y R127S T170*",3
"lib1","SARS-CoV-2","ATATTTCCTCGTGATC",2,11.58,10.87,0.11,0.09,2.89,1.06,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","ATATTTCCTGCGTGCT",2,76.52,9.89,-0.88,0.08,2.29,1.05,0,">1 nonsynonymous","F62T A105Y",2
"lib1","SARS-CoV-2","ATATTTCGAATACTTG",8,39.34,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L95H Q163E",2
"lib1","SARS-CoV-2","ATATTTCGATAAGATG",1,30.49,10.59,-0.18,0.08,2.94,1.02,0,"1 nonsynonymous","N130I",1
"lib1","SARS-CoV-2","ATATTTCGTTGAAATA",13,162.47,10.69,-0.08,0.05,2.94,1.03,0,">1 nonsynonymous","S53D D90H",2
"lib1","SARS-CoV-2","ATATTTCTACGAACTT",2,33.06,10.52,-0.25,0.06,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTTCTCATTTTGG",6,35.13,9.91,-0.85,0.16,1.87,1.06,0.01,">1 nonsynonymous","T15S N58S W106S",3
"lib1","SARS-CoV-2","ATATTTGAAAAAAGAA",1,34.02,10.69,-0.08,0.06,2.94,1,0,">1 nonsynonymous","Y39S T55Q S139R",3
"lib1","SARS-CoV-2","ATATTTGACAGAATGA",8,129.78,6,-4.76,1.17,1.5,1.18,0.02,">1 nonsynonymous","N58C F156G P177R K199I",4
"lib1","SARS-CoV-2","ATATTTGACCGTGCGG",14,2.41,NA,NA,NA,NA,NA,NA,"stop","A22P L162* T201S",3
"lib1","SARS-CoV-2","ATATTTGAGGAAGAAT",4,49.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16Y A81S P161L",3
"lib1","SARS-CoV-2","ATATTTGATCAATGAG",3,34.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50V G101N",2
"lib1","SARS-CoV-2","ATATTTGCATATTTAA",3,7.12,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","F62K D90F V103R",3
"lib1","SARS-CoV-2","ATATTTGCCGGAAATG",4,436.89,8.54,-2.22,0.09,2.4,1.05,0,">1 nonsynonymous","K87Q N118F",2
"lib1","SARS-CoV-2","ATATTTGTAACAATTA",9,0.53,NA,NA,NA,NA,NA,NA,"stop","N4* G86C D90F L188S",4
"lib1","SARS-CoV-2","ATATTTGTAACTTCAA",19,191.04,10.71,-0.05,0.06,2.94,1.04,0,"1 nonsynonymous","P54F",1
"lib1","SARS-CoV-2","ATATTTGTAGCGCTTC",11,3.46,NA,NA,NA,NA,NA,NA,"stop","C49* R124W L131V I142T Y159N",5
"lib1","SARS-CoV-2","ATATTTGTATAAACAC",2,22.2,6,-4.76,1.6,1.5,1.09,0,">1 nonsynonymous","N40K G172V",2
"lib1","SARS-CoV-2","ATATTTGTGCCGTGTA",3,7.95,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C49G W106S",2
"lib1","SARS-CoV-2","ATATTTGTTAAGCTTA",7,43.93,8.41,-2.36,0.11,1.5,1.1,0,">1 nonsynonymous","N1M N107V N130E",3
"lib1","SARS-CoV-2","ATATTTGTTGAATGAT",4,41.17,6.25,-4.51,0.76,1.5,1.24,0.04,">1 nonsynonymous","V20L R27W",2
"lib1","SARS-CoV-2","ATATTTGTTTATGACC",6,115.07,8.62,-2.14,0.12,2.52,1.09,0.01,">1 nonsynonymous","L60N N118S G152T K198T",4
"lib1","SARS-CoV-2","ATATTTTAAAGTTACT",11,68.56,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","K94A D137H",2
"lib1","SARS-CoV-2","ATATTTTAACATGCTG",1,1.68,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","ATATTTTAACCAATCA",3,113.21,9.69,-1.07,0.11,2.03,1.11,0.01,">1 nonsynonymous","A105L L122M",2
"lib1","SARS-CoV-2","ATATTTTAACGAACTG",7,37.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44N P82Q P96C C150W N171L",5
"lib1","SARS-CoV-2","ATATTTTAACGCTTAT",3,0.37,NA,NA,NA,NA,NA,NA,"stop","C49N Y50* L60P G172W",4
"lib1","SARS-CoV-2","ATATTTTAAGCCGCGT",2,15.9,10.3,-0.47,0.11,2.99,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATATTTTAATCTAAAA",10,66.44,6,-4.76,1.58,1.5,1.2,0.03,">1 nonsynonymous","N4H L125A P161R",3
"lib1","SARS-CoV-2","ATATTTTACAAGTAAC",4,27.21,6.17,-4.59,0.94,1.5,1.21,0.05,">1 nonsynonymous","N107L C150N",2
"lib1","SARS-CoV-2","ATATTTTACTTAATAA",1,0.99,NA,NA,NA,NA,NA,NA,"stop","S29W N107M R136*",3
"lib1","SARS-CoV-2","ATATTTTAGAGAAGAT",3,14.15,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C49V A105F I142L S200A",4
"lib1","SARS-CoV-2","ATATTTTCCCAGATCA",2,33.54,10.67,-0.09,0.04,2.91,1.07,0,">1 nonsynonymous","V37D Y66F",2
"lib1","SARS-CoV-2","ATATTTTGCCTACCAT",7,85.41,10.75,-0.01,0.06,2.9,1.06,0,">1 nonsynonymous","Y39F F44L F47Y",3
"lib1","SARS-CoV-2","ATATTTTGTAGTAAAA",2,70.8,10.24,-0.52,0.07,2.78,1,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","ATATTTTTCTGACTCT",2,58.34,9.12,-1.64,0.18,1.5,1.21,0.01,">1 nonsynonymous","N64Y V103L",2
"lib1","SARS-CoV-2","ATATTTTTCTTATTTA",3,2.06,NA,NA,NA,NA,NA,NA,"stop","S19* A33R S41F Q176M",4
"lib1","SARS-CoV-2","ATATTTTTTGAGGGGA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","T55* N107M",2
"lib1","SARS-CoV-2","ATATTTTTTTTTCGCG",9,25.63,7.79,-2.97,0.42,1.5,1,0.06,">1 nonsynonymous","I88Q V115S",2
"lib1","SARS-CoV-2","ATCAAAAAAAAGACCA",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65S P82W Q144L",3
"lib1","SARS-CoV-2","ATCAAAAAAAGTACCT",2,8.8,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F17K F44V Y165E R179S",4
"lib1","SARS-CoV-2","ATCAAAAAACAAAGCA",2,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R F99Y S113R N120K",4
"lib1","SARS-CoV-2","ATCAAAAAACAGGTTT",8,156.84,10.48,-0.28,0.05,2.89,1.02,0,">1 nonsynonymous","G9K A89S",2
"lib1","SARS-CoV-2","ATCAAAAAACGACAGT",1,18.54,10.72,-0.05,0.14,2.82,1.09,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ATCAAAAAAGAAATAT",4,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T N92F T201R",3
"lib1","SARS-CoV-2","ATCAAAAACACCAGTT",4,106.28,6,-4.76,1.54,1.5,1.2,0.01,">1 nonsynonymous","G74K K114P G155T Y178N",4
"lib1","SARS-CoV-2","ATCAAAAACAGTATTG",3,51.63,10.38,-0.38,0.05,2.92,1,0,">1 nonsynonymous","K56S W106F",2
"lib1","SARS-CoV-2","ATCAAAAACAGTCTAG",1,51.59,9.98,-0.78,0.11,2.55,1.03,0,">1 nonsynonymous","N24L V65L A192V",3
"lib1","SARS-CoV-2","ATCAAAAACCAATTGA",1,0.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","ATCAAAAACGCTTCAA",1,11.82,10.67,-0.09,0.03,3,1,0,">1 nonsynonymous","D59V L122S",2
"lib1","SARS-CoV-2","ATCAAAAACTTTAGGC",2,216.88,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36K Q84L I142V C150G L188F",5
"lib1","SARS-CoV-2","ATCAAAAAGATAGTTC",5,26.99,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P96S R136L L162A",3
"lib1","SARS-CoV-2","ATCAAAAATAATTTTT",3,38.67,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6N C158Q",2
"lib1","SARS-CoV-2","ATCAAAAATAGTTTTA",4,74.89,9.83,-0.93,0.09,2.43,1.05,0,">1 nonsynonymous","T15Y F44D T100L",3
"lib1","SARS-CoV-2","ATCAAAAATCGGCCTT",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R G101T",2
"lib1","SARS-CoV-2","ATCAAAAATCGTACCT",4,138.77,10.33,-0.44,0.04,2.87,1.03,0,">1 nonsynonymous","I104V K114I P149L",3
"lib1","SARS-CoV-2","ATCAAAAATCTCGAGA",1,26.66,10.83,0.06,0.04,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAAACATGCCATT",3,44.1,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N1C P7M F70L G83A Y91S F99Y D112V F167L",8
"lib1","SARS-CoV-2","ATCAAAACATTTGGAA",3,78.21,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6F G152I G172V",3
"lib1","SARS-CoV-2","ATCAAAACCCGCTCCA",6,267.33,10.74,-0.02,0.05,2.92,1.04,0,"1 nonsynonymous","A14Q",1
"lib1","SARS-CoV-2","ATCAAAACCTATCTCA",3,19.33,6.96,-3.8,0.44,1.5,1.25,0.02,">1 nonsynonymous","F12Q I104Y",2
"lib1","SARS-CoV-2","ATCAAAACGCGTAGTC",4,0.63,NA,NA,NA,NA,NA,NA,"stop","F44K T140* P149M",3
"lib1","SARS-CoV-2","ATCAAAACGGTGGTCA",4,27.17,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8T Y121C F167T",3
"lib1","SARS-CoV-2","ATCAAAACTAAGTAGA",6,26.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62D I80E T85Y L131A",4
"lib1","SARS-CoV-2","ATCAAAACTGTCCCGA",2,10.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13Y V37N C49S Y91L P133F",5
"lib1","SARS-CoV-2","ATCAAAAGAAGGCGAA",1,85.42,8.78,-1.98,0.1,2.6,1.15,0,">1 nonsynonymous","T55H D98Y S113C Q144N P197R",5
"lib1","SARS-CoV-2","ATCAAAAGCATCTAGG",5,56.67,10.44,-0.32,0.06,2.89,1.06,0,">1 nonsynonymous","K26E F99W",2
"lib1","SARS-CoV-2","ATCAAAAGCCTGTGCT",1,27.82,10.92,0.15,0.12,2.9,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAAATAAAAAGAA",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H Y35I",2
"lib1","SARS-CoV-2","ATCAAAATAAAATTTA",6,27.1,10.27,-0.5,0.13,2.26,1,0.01,">1 nonsynonymous","N107Q Y119S Y143A P149C",4
"lib1","SARS-CoV-2","ATCAAAATAACTATCA",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L F47T R127N",3
"lib1","SARS-CoV-2","ATCAAAATAAGGAGTC",4,51.53,10.72,-0.04,0.05,2.93,1.03,0,"1 nonsynonymous","I138L",1
"lib1","SARS-CoV-2","ATCAAAATAAGTGATT",10,23.35,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V11A C61K I104E",3
"lib1","SARS-CoV-2","ATCAAAATAATACGTG",1,62.04,7.91,-2.85,0.13,2.35,1.1,0.01,">1 nonsynonymous","T55A C61S Y119C F156T",4
"lib1","SARS-CoV-2","ATCAAAATATAAATAG",1,2.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","ATCAAAATATAATCTC",1,47.77,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","S36V S45R G172K",3
"lib1","SARS-CoV-2","ATCAAAATCAATAGAG",8,52.31,8.52,-2.25,0.14,2.57,1.16,0.01,">1 nonsynonymous","N109S Y178C",2
"lib1","SARS-CoV-2","ATCAAAATCTAGTCAA",4,58.9,10.77,0,0.1,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAAATGAATAAAC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","G9* D112V P169*",3
"lib1","SARS-CoV-2","ATCAAAATGACCCATG",8,174.3,10.12,-0.65,0.04,2.87,1,0,">1 nonsynonymous","C31I A42G",2
"lib1","SARS-CoV-2","ATCAAAATGATGCAAA",3,52.7,10.54,-0.22,0.04,2.86,1.05,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","ATCAAAATTACTGGTC",1,40.12,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C102Y P169F",2
"lib1","SARS-CoV-2","ATCAAACAAACCTTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","A14S C61F D90C G101K K114R L125*",6
"lib1","SARS-CoV-2","ATCAAACAATGGACAA",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N D75Y",2
"lib1","SARS-CoV-2","ATCAAACACTTAAGAC",1,28.57,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","E135N G152I Y165K",3
"lib1","SARS-CoV-2","ATCAAACATTGTCCCA",5,42.77,6,-4.76,1.85,3,1.1,0,">1 nonsynonymous","T63N D68M I80K",3
"lib1","SARS-CoV-2","ATCAAACCAAATCCTA",1,62.62,10.82,0.05,0.09,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAACCAGGAGTAA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S45F N107T",3
"lib1","SARS-CoV-2","ATCAAACCATACTCAA",1,16.88,8.45,-2.32,0.12,2.72,1.03,0.01,">1 nonsynonymous","D59P Q163D P197E",3
"lib1","SARS-CoV-2","ATCAAACCGCATGCCA",7,98.53,10.71,-0.06,0.03,2.95,1.05,0,">1 nonsynonymous","N1L S200R",2
"lib1","SARS-CoV-2","ATCAAACCTCACTAAA",5,85.51,9.92,-0.84,0.1,2.11,1.11,0,">1 nonsynonymous","Y35K V103I T201K",3
"lib1","SARS-CoV-2","ATCAAACGAGTGTACC",4,0.62,NA,NA,NA,NA,NA,NA,"stop","N1* L122C",2
"lib1","SARS-CoV-2","ATCAAACGATTTCCAA",1,1.69,NA,NA,NA,NA,NA,NA,"stop","A14* I104G S113V",3
"lib1","SARS-CoV-2","ATCAAACTCTAACTAC",1,11.39,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","S45F T85L T100K D112R Y175R L183R",6
"lib1","SARS-CoV-2","ATCAAACTGAAGGACA",3,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G L38R T63L P96Y Y119N",5
"lib1","SARS-CoV-2","ATCAAAGAAAAACCGT",4,36.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2E P7D L38S S43L Y123S C158D P169M",7
"lib1","SARS-CoV-2","ATCAAAGAACCATGTT",1,5.35,6,-4.76,2,3,1.08,0.02,">1 nonsynonymous","G83S D90Y N107Q G155E Q163H",5
"lib1","SARS-CoV-2","ATCAAAGAAGTAGGAG",1,9.06,6.67,-4.09,0.56,1.5,1,0.01,">1 nonsynonymous","C61S A105E L122T",3
"lib1","SARS-CoV-2","ATCAAAGAATGCAATT",3,56.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90Y D98N F126G G146R F156D F167L",6
"lib1","SARS-CoV-2","ATCAAAGAATGGAGAT",3,1.13,NA,NA,NA,NA,NA,NA,"stop","C49* S69L F99V Q163W",4
"lib1","SARS-CoV-2","ATCAAAGACGTATGAG",6,47.3,10.55,-0.21,0.09,2.87,1,0,">1 nonsynonymous","A14S A67V",2
"lib1","SARS-CoV-2","ATCAAAGATGAGAATT",13,164.32,10.79,0.03,0.07,2.9,1.06,0,"1 nonsynonymous","E154Q",1
"lib1","SARS-CoV-2","ATCAAAGATTCGAATC",2,23.18,8.61,-2.15,0.29,1.5,1.09,0.03,">1 nonsynonymous","A22T A81Y",2
"lib1","SARS-CoV-2","ATCAAAGATTCTCACC",3,62.56,10.64,-0.12,0.06,2.9,1.03,0,"1 nonsynonymous","R78G",1
"lib1","SARS-CoV-2","ATCAAAGCGAATAAAG",1,8.66,7.22,-3.55,0.53,1.5,1.06,0.06,">1 nonsynonymous","T55D S69M A89V V153W C158G",5
"lib1","SARS-CoV-2","ATCAAAGGAACATGAA",5,0.59,NA,NA,NA,NA,NA,NA,"stop","V37S P82G A89* L95T V181T",5
"lib1","SARS-CoV-2","ATCAAAGTAGTCTCAT",5,0,NA,NA,NA,NA,NA,NA,"stop","V103Q F167L F185T T201*",4
"lib1","SARS-CoV-2","ATCAAAGTGAAACGGT",8,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L F99Y P161S",3
"lib1","SARS-CoV-2","ATCAAAGTGAGCCGGG",2,23.96,9.83,-0.94,0.15,2.22,1.17,0.01,">1 nonsynonymous","A81M N107P",2
"lib1","SARS-CoV-2","ATCAAATAACAGTACT",5,31.77,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","W106G Y165V T201L",3
"lib1","SARS-CoV-2","ATCAAATAACGGTCCA",5,96.21,10.7,-0.06,0.06,2.84,1.04,0,"1 nonsynonymous","K132T",1
"lib1","SARS-CoV-2","ATCAAATAACTTGAAT",6,47.44,6,-4.76,1.52,1.88,1.15,0.01,">1 nonsynonymous","V37D S147T C158G T201P",4
"lib1","SARS-CoV-2","ATCAAATAGCGCCCCG",4,0.36,NA,NA,NA,NA,NA,NA,"stop","F70* A81G N92V E141R R179F",5
"lib1","SARS-CoV-2","ATCAAATAGTTAAAAT",4,52.25,10.6,-0.16,0.03,2.92,1.01,0,"1 nonsynonymous","A18R",1
"lib1","SARS-CoV-2","ATCAAATATTGTAGCT",5,171.27,10.74,-0.03,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAATCAACGACTT",4,66.86,9.89,-0.88,0.1,2.32,1.05,0,">1 nonsynonymous","G51C Q168R",2
"lib1","SARS-CoV-2","ATCAAATCACATCTCA",4,151.57,10,-0.77,0.1,2.09,1.06,0,">1 nonsynonymous","R136G T201M",2
"lib1","SARS-CoV-2","ATCAAATCAGTTACTG",1,47.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11F D90G D97G Q176R",4
"lib1","SARS-CoV-2","ATCAAATCCTCCACCT",1,23.64,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L95V C102A A145C T201S",4
"lib1","SARS-CoV-2","ATCAAATCTCCGACGT",2,48.65,6,-4.76,1.15,1.5,1.12,0.01,">1 nonsynonymous","A89Y R136C Q168T Q176V",4
"lib1","SARS-CoV-2","ATCAAATCTGATATAA",8,84.23,9.95,-0.81,0.08,2.2,1.09,0,">1 nonsynonymous","L5A L38D",2
"lib1","SARS-CoV-2","ATCAAATCTGGTAAAT",2,3.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","ATCAAATGGGTCTATT",4,18.9,10.6,-0.17,0.09,2.97,1.03,0,">1 nonsynonymous","N130V A190G",2
"lib1","SARS-CoV-2","ATCAAATTAGACGACT",2,38,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I28R L95R V103C N157S",4
"lib1","SARS-CoV-2","ATCAAATTAGCGTTAG",5,49.67,8.29,-2.48,0.28,1.5,1.05,0.03,">1 nonsynonymous","C102L L162V A192E",3
"lib1","SARS-CoV-2","ATCAAATTATGATTGG",2,9.86,6.81,-3.96,0.71,1.5,1.05,0.08,">1 nonsynonymous","D68L V77K T201V",3
"lib1","SARS-CoV-2","ATCAAATTCCGGACAA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","L60* G83H",2
"lib1","SARS-CoV-2","ATCAAATTTCCGCTAG",3,43.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y35V Y119F C150L T201S",4
"lib1","SARS-CoV-2","ATCAACAAACAACCCA",3,16.72,6.39,-4.38,0.86,1.5,1.24,0.07,">1 nonsynonymous","F8I F12D P96N L131H",4
"lib1","SARS-CoV-2","ATCAACAAAGGCTAGT",12,0.94,NA,NA,NA,NA,NA,NA,"stop","D34W K56* N130S T170M V181Y",5
"lib1","SARS-CoV-2","ATCAACAAGGTAAAAT",4,53.7,10.75,-0.01,0.09,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAACAAGTAAACAC",1,42.41,10.63,-0.13,0.06,2.87,1.09,0,">1 nonsynonymous","L5P S129C I138K",3
"lib1","SARS-CoV-2","ATCAACAATAAAAACA",3,34.45,9.64,-1.12,0.13,2.3,1.07,0.01,">1 nonsynonymous","C6N T63V S139A",3
"lib1","SARS-CoV-2","ATCAACAATACTGACA",4,30.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9R F70S I104N G174R",4
"lib1","SARS-CoV-2","ATCAACACGCTAATTA",6,27.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9Y K26L F62K D97L N157I S184A",6
"lib1","SARS-CoV-2","ATCAACACGTCTAATA",1,42.03,9.53,-1.23,0.09,2.28,1.1,0,">1 nonsynonymous","E10L D75N N120L E141Q",4
"lib1","SARS-CoV-2","ATCAACACTAATGTTT",5,36.82,10.28,-0.49,0.14,2.43,1,0.01,">1 nonsynonymous","A33Y D90L P133Q",3
"lib1","SARS-CoV-2","ATCAACAGAGAGGTAA",5,80.41,9.79,-0.97,0.06,2.7,1.06,0,">1 nonsynonymous","G9D S43L Y165I",3
"lib1","SARS-CoV-2","ATCAACAGAGGATCCT",13,96.4,6,-4.76,1.77,1.5,1.15,0.01,">1 nonsynonymous","Y35T G51Q L57V L95F T201W",5
"lib1","SARS-CoV-2","ATCAACAGCGCATGGT",5,3.13,NA,NA,NA,NA,NA,NA,"stop","S45* Y121R E141D",3
"lib1","SARS-CoV-2","ATCAACAGTATGATAG",2,11.22,10.5,-0.26,0.16,2.96,1.09,0.01,"1 nonsynonymous","L5C",1
"lib1","SARS-CoV-2","ATCAACAGTCTACCAA",1,0.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","ATCAACATAGCGACCA",1,36.37,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K87M C158I",2
"lib1","SARS-CoV-2","ATCAACATCCAGTTCT",5,84.65,10.74,-0.02,0.06,2.91,1.03,0,"1 nonsynonymous","G196D",1
"lib1","SARS-CoV-2","ATCAACATGCTACTGC",3,110.85,10.53,-0.24,0.05,2.84,1.04,0,">1 nonsynonymous","F8L G51K N58S",3
"lib1","SARS-CoV-2","ATCAACATTTGTATTA",1,25.77,10.68,-0.09,0.08,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAACATTTTTATAT",3,35.24,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y39N C61I D68L L95S A105K Y119S",6
"lib1","SARS-CoV-2","ATCAACCAAGATCAAC",5,59.3,6.1,-4.66,0.96,1.5,1.21,0.02,">1 nonsynonymous","R16M Q84H S113K",3
"lib1","SARS-CoV-2","ATCAACCAGTAAGTAA",2,23.62,7.92,-2.85,0.22,1.55,1.21,0.02,">1 nonsynonymous","S69C S113T",2
"lib1","SARS-CoV-2","ATCAACCAGTCTTAAA",6,120.71,10.42,-0.34,0.03,2.87,1.02,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","ATCAACCATAAACGGA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T E10R D34I G152R",4
"lib1","SARS-CoV-2","ATCAACCCAACTATCC",5,62.45,10.77,0.01,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAACCCACATTAAT",2,17.24,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","I2P D68T Y91G",3
"lib1","SARS-CoV-2","ATCAACCCAGTGACGT",4,34.79,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C6G P82C",2
"lib1","SARS-CoV-2","ATCAACCCCAATAACG",1,43.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A18W N40K A145E F167A",4
"lib1","SARS-CoV-2","ATCAACCTTTAAGTCT",4,38.89,8.75,-2.01,0.18,1.73,1.12,0.01,">1 nonsynonymous","A89G Y123R E141N",3
"lib1","SARS-CoV-2","ATCAACGAAGCTAACA",10,80.75,9.21,-1.55,0.08,2.66,1.09,0,">1 nonsynonymous","N107H N130P",2
"lib1","SARS-CoV-2","ATCAACGAATGTAATA",16,125.25,9.96,-0.81,0.09,2.15,1.04,0,">1 nonsynonymous","S36Y K94N V173R",3
"lib1","SARS-CoV-2","ATCAACGATAGCGGTA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","L162* V173S",2
"lib1","SARS-CoV-2","ATCAACGCTAGTAACA",1,31.44,6.03,-4.73,0.84,1.5,1.12,0.01,">1 nonsynonymous","L131D I142T",2
"lib1","SARS-CoV-2","ATCAACGCTAGTTGCG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","I72* A81T K87R Y121N",4
"lib1","SARS-CoV-2","ATCAACGGGATTTAAA",8,0.64,NA,NA,NA,NA,NA,NA,"stop","N13P Y39* T55G V103S S164F",5
"lib1","SARS-CoV-2","ATCAACGTACGAATAA",4,19.11,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","C61G I88R K128Y G146Y",4
"lib1","SARS-CoV-2","ATCAACGTCAATGGTT",3,13.82,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6S Y50S F126I S200F",4
"lib1","SARS-CoV-2","ATCAACTAACTGACAG",4,1.03,NA,NA,NA,NA,NA,NA,"stop","P96H L131Q E141* G155A",4
"lib1","SARS-CoV-2","ATCAACTAAGAAAAAG",2,47.42,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S139P G172F",2
"lib1","SARS-CoV-2","ATCAACTACCATTGGT",2,1.9,NA,NA,NA,NA,NA,NA,"stop","V37* K56R V71N D97F",4
"lib1","SARS-CoV-2","ATCAACTATAATGATG",1,25,10.84,0.07,0.1,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCAACTGTCTAGAAC",1,35.63,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","S36L D90F E135P",3
"lib1","SARS-CoV-2","ATCAACTTACAGAAAC",2,2.57,NA,NA,NA,NA,NA,NA,"stop","L5Q N24K P133* L162M",4
"lib1","SARS-CoV-2","ATCAACTTGAACTAAT",5,42.66,10.74,-0.02,0.1,2.93,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAGACAGTTGGAT",2,33.38,8.76,-2.01,0.28,1.5,1.16,0.03,">1 nonsynonymous","F8S L162V T201A",3
"lib1","SARS-CoV-2","ATCAAGACCACGTTTC",1,40.46,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64L Q84L L95Y",3
"lib1","SARS-CoV-2","ATCAAGACCTCACAAG",4,28.47,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","K48Q Y91G A105I R136C P149T",5
"lib1","SARS-CoV-2","ATCAAGACTTCGAACG",1,14.82,10.62,-0.14,0.06,2.86,1.08,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","ATCAAGAGAATTCAAT",3,20.76,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","D34I Y91D L122G N157Y",4
"lib1","SARS-CoV-2","ATCAAGAGGAAGTCTT",6,81.63,9.59,-1.17,0.16,1.72,1.09,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","ATCAAGAGTACGGTCT",2,15.58,10.18,-0.58,0.34,1.5,1,0.08,">1 nonsynonymous","Y50L T201M",2
"lib1","SARS-CoV-2","ATCAAGAGTTCCCCTC",5,0.28,NA,NA,NA,NA,NA,NA,"stop","T55* A105G G172*",3
"lib1","SARS-CoV-2","ATCAAGATTATAAAAA",2,12.8,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","L5P A33D F44C S53V N64H N107Y P149R",7
"lib1","SARS-CoV-2","ATCAAGATTCTCCATC",5,9.99,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C102S Q168S",2
"lib1","SARS-CoV-2","ATCAAGCAAACACGAA",2,129.01,10.77,0.01,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAGCAACAACAAA",5,38.09,6,-4.76,2,3,1.19,0.01,"1 nonsynonymous","G101N",1
"lib1","SARS-CoV-2","ATCAAGCAATAGATCT",3,21.46,10.75,-0.02,0.03,2.94,1.02,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","ATCAAGCACTGCTACA",15,202.17,10.12,-0.64,0.08,2.55,1,0,">1 nonsynonymous","L5H L57R",2
"lib1","SARS-CoV-2","ATCAAGCCAATGCTTA",5,65.12,10.36,-0.41,0.04,2.83,1.01,0,">1 nonsynonymous","N4S A42V S184F",3
"lib1","SARS-CoV-2","ATCAAGCGATGCCCAT",3,36.01,10.68,-0.09,0.06,2.92,1.06,0,"1 nonsynonymous","T46V",1
"lib1","SARS-CoV-2","ATCAAGCGTACCAATA",4,30.06,10.19,-0.57,0.06,2.89,1.05,0,">1 nonsynonymous","S36L K114L L122K E154Y",4
"lib1","SARS-CoV-2","ATCAAGCGTGATACTA",2,30.31,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3E R16D Y50T N107K R136L K198Q",6
"lib1","SARS-CoV-2","ATCAAGCTAGATTGAG",7,40.78,8.1,-2.67,0.47,1.5,1,0.08,">1 nonsynonymous","K87S Y165S",2
"lib1","SARS-CoV-2","ATCAAGGAAAACACTA",6,52.68,10.84,0.08,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAGGATATCGTGA",2,47.98,10.75,-0.01,0.08,2.93,1.02,0,">1 nonsynonymous","D98V N130K",2
"lib1","SARS-CoV-2","ATCAAGGCTGTGCACT",4,91.24,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16N D98Y D112K N118D S129T V173S",6
"lib1","SARS-CoV-2","ATCAAGGCTTTTTAGA",4,93.9,10.75,-0.01,0.08,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAAGTAATAAGATA",1,23.44,10.81,0.04,0.09,2.98,1.01,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","ATCAAGTCCCGTATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42F C49L F62* I88Q",4
"lib1","SARS-CoV-2","ATCAAGTCTGCGTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16E N64Y P169L",3
"lib1","SARS-CoV-2","ATCAAGTGTTGTCCCT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","T63F K94S A145L K199*",4
"lib1","SARS-CoV-2","ATCAAGTTCTTATCTC",3,5.87,9.89,-0.87,0.11,2.49,1.04,0.01,">1 nonsynonymous","I2L P133I",2
"lib1","SARS-CoV-2","ATCAAGTTTATAACAC",7,45.57,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y91T N157F",2
"lib1","SARS-CoV-2","ATCAAGTTTCTTGAAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C61* N107T F160R V182P",4
"lib1","SARS-CoV-2","ATCAATAAAAGGCTAT",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V D98F N120F",3
"lib1","SARS-CoV-2","ATCAATAAACCTGTGA",10,111.97,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y123F N130A G172K",3
"lib1","SARS-CoV-2","ATCAATAAAGAAAAAA",2,81.23,10.78,0.01,0.08,2.93,1.05,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","ATCAATAAATATATTA",1,51.26,6,-4.76,1.4,1.5,1.13,0.02,"1 nonsynonymous","Y123P",1
"lib1","SARS-CoV-2","ATCAATAACTAATCTC",1,40.71,10.33,-0.44,0.1,2.66,1.09,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","ATCAATAAGCATTCTT",2,127.21,8.31,-2.45,0.14,2.12,1.1,0.01,">1 nonsynonymous","T15E S41G N171P",3
"lib1","SARS-CoV-2","ATCAATAAGTAAAAAG",3,41.74,10.78,0.02,0.07,2.89,1.07,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","ATCAATAATAAACGAA",2,28.82,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C31P G86D",2
"lib1","SARS-CoV-2","ATCAATAATTGATATT",13,125.98,10.71,-0.06,0.04,2.9,1.05,0,">1 nonsynonymous","T55D L60V K114R",3
"lib1","SARS-CoV-2","ATCAATACGCATTAAT",4,14.17,9.13,-1.64,0.16,1.96,1.06,0.01,">1 nonsynonymous","Y35D F44E D97A K128T",4
"lib1","SARS-CoV-2","ATCAATACTCTATCAT",2,6.79,11.1,0.33,0.14,2.92,1,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","ATCAATACTTCTTAAC",2,25.12,6.62,-4.14,0.39,1.5,1.14,0.02,">1 nonsynonymous","T15D G86I K128I F160L",4
"lib1","SARS-CoV-2","ATCAATAGAAGTTAGA",4,90.22,10.76,-0.01,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAATAGAGTGGCAA",2,35.98,9.51,-1.25,0.14,2.15,1.09,0.01,">1 nonsynonymous","A81S G155V",2
"lib1","SARS-CoV-2","ATCAATATAAAACAGA",1,16.02,9.95,-0.81,0.12,2.94,1,0.01,">1 nonsynonymous","T55S P169D",2
"lib1","SARS-CoV-2","ATCAATATATTTACGC",4,70.71,10.77,0.01,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAATATCTAACAAA",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K V103A N157K T201Q",4
"lib1","SARS-CoV-2","ATCAATATCTCAGGAA",6,175.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N151V P177V",2
"lib1","SARS-CoV-2","ATCAATATTTGAACCC",1,1.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138A",1
"lib1","SARS-CoV-2","ATCAATCAACCTTGTA",2,12.76,10.6,-0.17,0.1,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAATCAATAGGGAG",6,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M S19R F47E C102P",4
"lib1","SARS-CoV-2","ATCAATCACTCATCAG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","W23R D34* V65F Y93S G101* L122E",6
"lib1","SARS-CoV-2","ATCAATCCAGAGACCA",15,229.17,6,-4.76,0.79,1.5,1.19,0.01,">1 nonsynonymous","I28M P96S Y165S A190E",4
"lib1","SARS-CoV-2","ATCAATCCATCCCAAA",3,11.82,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V11L Y91V G146L",3
"lib1","SARS-CoV-2","ATCAATCCATTTCAGT",7,123.92,10.2,-0.56,0.05,2.87,1.02,0,">1 nonsynonymous","C61K N107S",2
"lib1","SARS-CoV-2","ATCAATCCGAGCTAAT",7,50.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86V T201V",2
"lib1","SARS-CoV-2","ATCAATCCGTAATAAT",5,18.82,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L38D R124W Y143V",3
"lib1","SARS-CoV-2","ATCAATCCTAAGATCT",2,1.4,NA,NA,NA,NA,NA,NA,"stop","G101Y N107V S129V I138* S184D",5
"lib1","SARS-CoV-2","ATCAATCGAGATCCGA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","ATCAATCGTCAAGCAC",4,111.42,10.63,-0.14,0.05,2.88,1.09,0,">1 nonsynonymous","L5T G83N T100Y",3
"lib1","SARS-CoV-2","ATCAATCTAACGTTCC",19,176.07,8.9,-1.86,0.14,1.65,1.15,0.01,">1 nonsynonymous","T63R G83V E154W N171V S200Y",5
"lib1","SARS-CoV-2","ATCAATCTAGCTTGAA",4,93.24,10.68,-0.09,0.07,2.9,1.05,0,">1 nonsynonymous","P149D T201S",2
"lib1","SARS-CoV-2","ATCAATCTATGGAAAT",7,209.84,10.74,-0.02,0.07,2.85,1.06,0,"1 nonsynonymous","K198P",1
"lib1","SARS-CoV-2","ATCAATCTATGGTTAA",6,211.78,10.35,-0.41,0.03,2.97,1,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","ATCAATGACGATACAG",1,32.36,9.39,-1.38,0.3,1.5,1.05,0.05,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","ATCAATGATAATAAAC",7,74.27,10.8,0.04,0.1,2.87,1.06,0,"1 nonsynonymous","T63N",1
"lib1","SARS-CoV-2","ATCAATGGCTCAAATT",6,64.66,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25D V37R P96Y W106K Y119L S129V T201P",7
"lib1","SARS-CoV-2","ATCAATGGGAACAAAA",12,233.5,9.11,-1.65,0.06,2.81,1.1,0,">1 nonsynonymous","T63E G166R",2
"lib1","SARS-CoV-2","ATCAATTAAGGTAACA",5,194.01,10.76,0,0.07,2.9,1.04,0,">1 nonsynonymous","N4V T201S",2
"lib1","SARS-CoV-2","ATCAATTAGTAAAAAG",1,18.37,9.34,-1.43,0.38,1.5,1,0.06,">1 nonsynonymous","A22T A81Y",2
"lib1","SARS-CoV-2","ATCAATTAGTGGCTGA",19,162.54,9.11,-1.65,0.15,1.5,1.06,0.01,">1 nonsynonymous","Y35R A81T",2
"lib1","SARS-CoV-2","ATCAATTATAAAAATC",6,47.14,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","P7V R73T R124W R136L",4
"lib1","SARS-CoV-2","ATCAATTATAATTACT",2,0,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","ATCAATTATTGTTTCG",3,21.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36T C61M G86C I88D Y143N G166M Y175S",7
"lib1","SARS-CoV-2","ATCAATTCAAAAGTAT",4,246.62,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12L I88Y",2
"lib1","SARS-CoV-2","ATCAATTCCCTTAGAA",4,8.6,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T3Y S41W I80M N120L G152R L162E",6
"lib1","SARS-CoV-2","ATCAATTCGCACGCAT",1,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L C49S F160N K199R",4
"lib1","SARS-CoV-2","ATCAATTGTAAAATCA",1,10.43,6,-4.76,2,1.5,1.16,0.07,">1 nonsynonymous","F62V G83R P96N V103D A145M",5
"lib1","SARS-CoV-2","ATCAATTGTATCCGAG",3,21,6,-4.76,0.89,3,1.12,0.01,">1 nonsynonymous","F12G D68L N107S",3
"lib1","SARS-CoV-2","ATCAATTTATAAAACG",2,20.02,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F12L L95P",2
"lib1","SARS-CoV-2","ATCAATTTATACCTTC",5,63.89,10.13,-0.63,0.07,2.27,1.07,0,">1 nonsynonymous","A33G P133W",2
"lib1","SARS-CoV-2","ATCAATTTATGAAATC",6,45.19,9.59,-1.18,0.13,1.63,1.14,0.01,">1 nonsynonymous","T3F L38H T46F",3
"lib1","SARS-CoV-2","ATCAATTTATTCTAAT",5,66.82,10.28,-0.48,0.07,2.69,1,0,">1 nonsynonymous","I2D N40I F160S",3
"lib1","SARS-CoV-2","ATCAATTTGTTCAACA",7,32.79,9.22,-1.54,0.11,1.91,1.16,0,">1 nonsynonymous","N13D C61S T85L S129Q",4
"lib1","SARS-CoV-2","ATCAATTTTATTGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29H T55W R78G L162W",4
"lib1","SARS-CoV-2","ATCACAAAAATCACTT",8,50.27,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C49F R78H N107L",3
"lib1","SARS-CoV-2","ATCACAAAAGCCCACA",9,28.69,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y66D C158H",2
"lib1","SARS-CoV-2","ATCACAAACAACTACA",5,31.56,6,-4.76,2,1.5,1.25,0.02,"1 nonsynonymous","Y66P",1
"lib1","SARS-CoV-2","ATCACAAACCGCCCCA",6,53.28,10.27,-0.49,0.07,2.8,1,0,">1 nonsynonymous","T55K S69L P197L",3
"lib1","SARS-CoV-2","ATCACAAAGACCGGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* F47A N64V W106Y V173S",5
"lib1","SARS-CoV-2","ATCACAAAGTGAGAAA",6,120.53,6.28,-4.48,0.51,1.5,1.21,0.01,">1 nonsynonymous","K94A S113M F160W T201M",4
"lib1","SARS-CoV-2","ATCACAACAGCATAAT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","D59R Y66R T100M S129P S164P P197*",6
"lib1","SARS-CoV-2","ATCACAACGAAACGGA",2,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F P7T T15S N130H L183S",5
"lib1","SARS-CoV-2","ATCACAACTGAGCACT",1,24.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N40D F70D L131G V173C",4
"lib1","SARS-CoV-2","ATCACAACTGTTTAAA",2,8.02,8.94,-1.82,0.19,1.74,1.08,0.01,">1 nonsynonymous","I28L L131Q",2
"lib1","SARS-CoV-2","ATCACAAGAATAAGAA",8,2.18,NA,NA,NA,NA,NA,NA,"stop","V11A S36G C61F Q84* L162R",5
"lib1","SARS-CoV-2","ATCACAAGTTAGAAGC",1,18.28,10.65,-0.11,0.05,2.94,1.05,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","ATCACAATAAAAACAA",1,3.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119Q",1
"lib1","SARS-CoV-2","ATCACAATGATTCATA",5,111.02,8.52,-2.24,0.18,1.97,1.14,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","ATCACACAAAGGATTT",1,10.24,8.76,-2,0.18,2.59,1.15,0.02,">1 nonsynonymous","N58V A145D",2
"lib1","SARS-CoV-2","ATCACACACCCTTCAG",6,156.59,10.4,-0.37,0.05,2.8,1.06,0,">1 nonsynonymous","A42N N120L V153L",3
"lib1","SARS-CoV-2","ATCACACACGAAAACC",4,11.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V11M F70K C102R G166H T201L",5
"lib1","SARS-CoV-2","ATCACACACGAACCCA",2,21.95,8.43,-2.34,0.32,1.5,1,0.04,">1 nonsynonymous","Y50D V153H",2
"lib1","SARS-CoV-2","ATCACACAGACCCAAC",1,10.29,10.21,-0.55,0.22,2.41,1,0.02,">1 nonsynonymous","R16V V65Q A192V",3
"lib1","SARS-CoV-2","ATCACACATATAGATA",7,101.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K94A F99G A105W",3
"lib1","SARS-CoV-2","ATCACACGACAACATT",1,74.73,10.16,-0.6,0.05,2.7,1.05,0,">1 nonsynonymous","D98F K128V",2
"lib1","SARS-CoV-2","ATCACACGGAACATAG",6,105.93,8.51,-2.25,0.2,1.9,1.17,0.02,">1 nonsynonymous","L38Q V77L F156S",3
"lib1","SARS-CoV-2","ATCACACTACAAGCTA",1,57.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y119H F167T",2
"lib1","SARS-CoV-2","ATCACACTCGTCCTGG",1,43.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44P L57D P161K",3
"lib1","SARS-CoV-2","ATCACACTGACAGTTA",1,12.92,10.11,-0.65,0.08,2.96,1,0,">1 nonsynonymous","V37L F44E C61N I104V",4
"lib1","SARS-CoV-2","ATCACACTGCCTAGGA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib1","SARS-CoV-2","ATCACAGAACAGCTGA",3,84.61,8.39,-2.37,0.15,2.08,1.12,0.01,">1 nonsynonymous","D59S G146L",2
"lib1","SARS-CoV-2","ATCACAGAACTTTATG",4,20.9,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P54L K94T K128T Q163L",4
"lib1","SARS-CoV-2","ATCACAGAGAAATGAT",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S K26T I88W S139Y",4
"lib1","SARS-CoV-2","ATCACAGGTTGTGACA",6,27.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6S K94G K128H P149F L162A",5
"lib1","SARS-CoV-2","ATCACAGTGGAATCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V T15S T100* A105* T201*",5
"lib1","SARS-CoV-2","ATCACAGTGTGTATTT",4,41.88,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A14E K87R K132V C150K T201N",5
"lib1","SARS-CoV-2","ATCACAGTTGGAGGAT",3,35.71,9.81,-0.95,0.15,2.33,1.02,0.01,">1 nonsynonymous","D34T P133G",2
"lib1","SARS-CoV-2","ATCACATAAAATACTT",3,15.51,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S43C V103G K128H S139D F160K G166V K199T",7
"lib1","SARS-CoV-2","ATCACATAACAAATTC",8,228.78,7.81,-2.95,0.1,1.75,1.1,0,">1 nonsynonymous","V32T C150G Q163Y K198A",4
"lib1","SARS-CoV-2","ATCACATACTTAATCA",2,42.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9T S45A P82M N151R G166A R179V",6
"lib1","SARS-CoV-2","ATCACATAGTAGATTA",4,4.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89K",1
"lib1","SARS-CoV-2","ATCACATATCTTACGA",1,87.96,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","D97L Y159S",2
"lib1","SARS-CoV-2","ATCACATCATGACCAT",2,107.9,10.71,-0.05,0.05,2.89,1.07,0,">1 nonsynonymous","C61S A190S",2
"lib1","SARS-CoV-2","ATCACATCGAATATTA",24,192.1,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A18P F44T T55P D137N G166S",5
"lib1","SARS-CoV-2","ATCACATCGATAAACT",6,136.41,10.74,-0.03,0.05,2.89,1.03,0,">1 nonsynonymous","T55R D98T",2
"lib1","SARS-CoV-2","ATCACATCGCTACACG",4,8.62,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A81G V103C",2
"lib1","SARS-CoV-2","ATCACCAAAAACACCA",7,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y V103G R127H",3
"lib1","SARS-CoV-2","ATCACCAAACTAATCG",3,72.11,6.1,-4.66,0.55,1.5,1.16,0.01,">1 nonsynonymous","C158R Q168D",2
"lib1","SARS-CoV-2","ATCACCAAATTTCTAC",3,25.48,10.72,-0.04,0.09,2.86,1.15,0,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","ATCACCAATAGTCCAG",3,1.41,NA,NA,NA,NA,NA,NA,"stop","L38D Y50L V65* Q84V L95Y",5
"lib1","SARS-CoV-2","ATCACCAATTCCCATG",6,141.57,10.73,-0.04,0.06,2.9,1.06,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","ATCACCAATTCTAACA",3,15.02,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T55A G86C K94P C102F",4
"lib1","SARS-CoV-2","ATCACCACAGCTACAA",1,18.87,9.87,-0.89,0.31,1.5,1,0.06,">1 nonsynonymous","F8G N58L G152N",3
"lib1","SARS-CoV-2","ATCACCAGATATAATC",2,78.57,9.74,-1.02,0.05,2.86,1.06,0,">1 nonsynonymous","I2S T63N L111T",3
"lib1","SARS-CoV-2","ATCACCATAAACCATT",6,166.44,10.82,0.05,0.07,2.91,1.05,0,"1 nonsynonymous","K26R",1
"lib1","SARS-CoV-2","ATCACCATTACGATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F I88S G117L I142S V180T",5
"lib1","SARS-CoV-2","ATCACCCAGTAGAGAA",9,102.99,8.65,-2.11,0.25,1.58,1.18,0.02,">1 nonsynonymous","F44I K114S Y165I",3
"lib1","SARS-CoV-2","ATCACCCATGGTTTGA",3,22.31,10.7,-0.06,0.08,2.83,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCACCCATTGGGAAC",1,20.6,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","P96C L131A",2
"lib1","SARS-CoV-2","ATCACCCCCTTAATCT",1,77.5,10.62,-0.15,0.11,2.79,1.09,0.01,">1 nonsynonymous","T3N L122M T201Y",3
"lib1","SARS-CoV-2","ATCACCCGAATCAAGA",2,338.11,7.65,-3.12,0.22,1.5,1.08,0.02,">1 nonsynonymous","W106L Y143L",2
"lib1","SARS-CoV-2","ATCACCCGTTTTAAAG",11,6.83,NA,NA,NA,NA,NA,NA,"stop","G9C A14K Y119* K198H",4
"lib1","SARS-CoV-2","ATCACCCTCATCTTGG",3,14.44,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","K48P P96L T140F G172L",4
"lib1","SARS-CoV-2","ATCACCCTGCCGAAGT",1,5.56,NA,NA,NA,NA,NA,NA,"stop","C6* N13S K114P G155Y P191L",5
"lib1","SARS-CoV-2","ATCACCCTTAGATATT",1,14.71,6,-4.76,2,1.5,1.11,0.01,"1 nonsynonymous","G101P",1
"lib1","SARS-CoV-2","ATCACCGACTTTGATT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R L57M S69Q D97R Q144S G152L",6
"lib1","SARS-CoV-2","ATCACCGAGGAAATAG",1,10.41,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","F17L N157P",2
"lib1","SARS-CoV-2","ATCACCGATTTGTGAA",2,36.28,9.01,-1.75,0.16,2.32,1.09,0.01,">1 nonsynonymous","N13V C61K F156S",3
"lib1","SARS-CoV-2","ATCACCGCTTGGGTGT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24P N107S",2
"lib1","SARS-CoV-2","ATCACCGGAACAAGAC",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97W Y159I T201D",3
"lib1","SARS-CoV-2","ATCACCTAAATCGTCA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","L5G S41*",2
"lib1","SARS-CoV-2","ATCACCTAACACTTCC",10,93.06,10.47,-0.29,0.08,2.88,1,0,">1 nonsynonymous","I104L Y123L",2
"lib1","SARS-CoV-2","ATCACCTACTTATGCC",3,19.82,8.81,-1.95,0.3,1.5,1.1,0.04,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","ATCACCTCAAGCTCTT",4,103,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F44V Y123L P177V",3
"lib1","SARS-CoV-2","ATCACCTCCATACAAC",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S T85Y D90N L95A",4
"lib1","SARS-CoV-2","ATCACCTTAGAAAGAA",1,15.14,10.81,0.04,0.07,2.9,1.03,0,"1 nonsynonymous","V52F",1
"lib1","SARS-CoV-2","ATCACCTTAGAACAGA",2,66.26,6.42,-4.34,0.64,1.5,1.19,0.03,">1 nonsynonymous","F47I G155A Q176E S184T",4
"lib1","SARS-CoV-2","ATCACCTTGCGCTTCA",2,37.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T F44C Q79M D90V Y165N",5
"lib1","SARS-CoV-2","ATCACCTTTCGGGGGG",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K C49G F99M P149M G152Y C158S",6
"lib1","SARS-CoV-2","ATCACGAAGCCACCTA",8,143.11,9.69,-1.07,0.03,2.91,1.04,0,">1 nonsynonymous","A18Q L125T",2
"lib1","SARS-CoV-2","ATCACGAATCCCGCAA",12,22.8,9.13,-1.63,0.2,1.91,1.11,0.02,">1 nonsynonymous","S41H P54H P133D G174W",4
"lib1","SARS-CoV-2","ATCACGAATGAAGGTT",2,16.41,6,-4.76,2,1.5,1.19,0.06,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","ATCACGAATGATTATA",1,19.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105N K114T",2
"lib1","SARS-CoV-2","ATCACGACCACTATAG",3,5.85,6,-4.76,2,3,1.33,0.03,">1 nonsynonymous","N58Y P96W R124H",3
"lib1","SARS-CoV-2","ATCACGACCTTGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N64I D97* Q168M",3
"lib1","SARS-CoV-2","ATCACGACTCACGATC",2,47.8,6.08,-4.68,1.05,1.5,1.17,0.03,">1 nonsynonymous","W23C R136P",2
"lib1","SARS-CoV-2","ATCACGACTCTGCACT",1,13.19,6.42,-4.34,0.38,3,1.12,0.01,">1 nonsynonymous","R127T C158A A192I",3
"lib1","SARS-CoV-2","ATCACGAGAATAAACC",6,36.65,10.74,-0.02,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCACGATGGGATTCA",1,44.17,9.96,-0.8,0.11,2.51,1.07,0,">1 nonsynonymous","D34A I104L S129V S200I",4
"lib1","SARS-CoV-2","ATCACGCAATCACTGA",3,3.43,NA,NA,NA,NA,NA,NA,"stop","T85K F167*",2
"lib1","SARS-CoV-2","ATCACGCAATTTTAAT",3,66.54,8.99,-1.78,0.04,2.87,1.08,0,">1 nonsynonymous","G117L T148I",2
"lib1","SARS-CoV-2","ATCACGCCCTCAACTT",2,24.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S113E Q168C Q176L",3
"lib1","SARS-CoV-2","ATCACGCGCTTATACT",1,6.42,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","K94T Y175T",2
"lib1","SARS-CoV-2","ATCACGCGTTGCTGTT",1,24.58,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F70C T85S",2
"lib1","SARS-CoV-2","ATCACGCTGACGCTCT",3,50.56,10.23,-0.53,0.05,2.88,1,0,">1 nonsynonymous","C6V P54A",2
"lib1","SARS-CoV-2","ATCACGGAAAATCTCT",6,21.2,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","V37S K87N P96L C102S",4
"lib1","SARS-CoV-2","ATCACGGACCTTTTGG",8,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T F47P H189P",3
"lib1","SARS-CoV-2","ATCACGGACGTGTCGA",9,69.08,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T85W A105M R127M Y165L",4
"lib1","SARS-CoV-2","ATCACGGGCACATTGA",6,47.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23S T100C G117C Y175T",4
"lib1","SARS-CoV-2","ATCACGGGCACTCGGG",1,118.06,8.51,-2.25,0.1,2.76,1.09,0.01,">1 nonsynonymous","N58S R73Q Y119S",3
"lib1","SARS-CoV-2","ATCACGGTACCAGACG",4,47.69,10.81,0.04,0.08,2.87,1.03,0,">1 nonsynonymous","V11I D90M",2
"lib1","SARS-CoV-2","ATCACGTAACGAAAAT",2,18.98,10.47,-0.29,0.1,2.98,1,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","ATCACGTCATAGGCAG",2,10.69,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F8P L38N G51R K94F",4
"lib1","SARS-CoV-2","ATCACGTGACTTTCAA",3,41.89,10.76,0,0.08,2.93,1.05,0,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","ATCACGTTAATCTTAA",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L G86D G152H",3
"lib1","SARS-CoV-2","ATCACGTTAGTTCAAA",3,54.34,10.34,-0.42,0.05,2.91,1,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","ATCACTAAAAGGACCC",4,47.74,10.65,-0.11,0.09,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCACTAAAGATATAT",1,42.48,10.61,-0.15,0.06,2.96,1.04,0,">1 nonsynonymous","Y39A P149S",2
"lib1","SARS-CoV-2","ATCACTAACGTAGACG",3,0.74,NA,NA,NA,NA,NA,NA,"stop","T3S A14E Q168*",3
"lib1","SARS-CoV-2","ATCACTAACTATTGTG",6,76.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25F N64L N120F G174I",4
"lib1","SARS-CoV-2","ATCACTAAGAACTATG",13,85.28,6,-4.76,1.97,1.5,1.14,0.01,">1 nonsynonymous","C61K V103W A192E",3
"lib1","SARS-CoV-2","ATCACTAAGACTAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib1","SARS-CoV-2","ATCACTAAGGGTTCGT",1,28.87,8.41,-2.35,0.32,1.5,1.07,0.07,">1 nonsynonymous","F12L A105V L122E E141L",4
"lib1","SARS-CoV-2","ATCACTAATAAAGTAC",1,14.21,6.48,-4.28,0.69,1.5,1.2,0.06,">1 nonsynonymous","F44L V71Y G83Q R124E R136A I142F Y165R",7
"lib1","SARS-CoV-2","ATCACTACAATAGCGG",1,35.04,10.29,-0.48,0.06,2.97,1.02,0,"1 nonsynonymous","R73M",1
"lib1","SARS-CoV-2","ATCACTACTATAATTC",6,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q T15H C158M V181R",4
"lib1","SARS-CoV-2","ATCACTAGTTATCTAG",3,50.71,7.87,-2.9,0.14,1.67,1.09,0.01,"1 nonsynonymous","Y159D",1
"lib1","SARS-CoV-2","ATCACTATAGCTATTA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","S147Y T170* F185T",3
"lib1","SARS-CoV-2","ATCACTATATTATTGT",2,19.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6K R73V L125Y",3
"lib1","SARS-CoV-2","ATCACTATCACTCGTG",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M A81V P96Y C158F",4
"lib1","SARS-CoV-2","ATCACTATGATAACAT",4,57.14,7.3,-3.47,0.2,1.5,1.12,0.01,">1 nonsynonymous","L5Q G83Q A89S Y121C G196W",5
"lib1","SARS-CoV-2","ATCACTATGGTATCAA",1,14.76,9.87,-0.9,0.24,2.19,1.09,0.02,"1 nonsynonymous","I88T",1
"lib1","SARS-CoV-2","ATCACTCAACTAGACT",1,11.98,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y93H S113F N120S G172E",4
"lib1","SARS-CoV-2","ATCACTCACAGGTCCG",1,22.54,6.83,-3.93,0.67,1.5,1.09,0.06,">1 nonsynonymous","Y91E C150W",2
"lib1","SARS-CoV-2","ATCACTCACTACGTTT",2,14.56,10.12,-0.64,0.09,2.82,1.06,0,">1 nonsynonymous","C61S D97T F126V",3
"lib1","SARS-CoV-2","ATCACTCATTACGTAT",1,43.2,9.29,-1.47,0.1,2.75,1.17,0,">1 nonsynonymous","N4T S29G Y119P",3
"lib1","SARS-CoV-2","ATCACTCCACTACGGC",5,81.46,10.75,-0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCACTCCAGGAAATC",7,114.19,10.59,-0.17,0.05,2.88,1.06,0,">1 nonsynonymous","L5K L95I E141R",3
"lib1","SARS-CoV-2","ATCACTCCTATGAACC",1,50.5,10.79,0.03,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCACTCGAATAACAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N107* F160W",2
"lib1","SARS-CoV-2","ATCACTCGATGTTCAA",1,23.84,10.23,-0.54,0.09,2.89,1.01,0,">1 nonsynonymous","T15R A81G",2
"lib1","SARS-CoV-2","ATCACTCGTGAAAGAA",5,154.3,8.91,-1.86,0.07,2.83,1.13,0,">1 nonsynonymous","T100M N157T",2
"lib1","SARS-CoV-2","ATCACTCTAAAAAAAC",4,45.06,10.21,-0.55,0.07,2.7,1,0,">1 nonsynonymous","C6L T201R",2
"lib1","SARS-CoV-2","ATCACTCTCTATATAT",14,283.97,9.75,-1.01,0.06,2.52,1.05,0,">1 nonsynonymous","C6F C61N Y178V",3
"lib1","SARS-CoV-2","ATCACTGACAATTAGT",2,42.58,9.73,-1.03,0.13,2.24,1.01,0.01,">1 nonsynonymous","D98G F134K",2
"lib1","SARS-CoV-2","ATCACTGATACGCGAA",7,103.25,10.1,-0.67,0.05,2.86,1,0,">1 nonsynonymous","K128Q G155C",2
"lib1","SARS-CoV-2","ATCACTGATTCTTAGA",1,45.52,6.46,-4.31,0.53,1.5,1.15,0.03,">1 nonsynonymous","I88Y V103S Q176R",3
"lib1","SARS-CoV-2","ATCACTGCTATATTAA",5,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19T",1
"lib1","SARS-CoV-2","ATCACTGTAAGTGAGA",2,97.21,10.2,-0.57,0.04,2.96,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","ATCACTTAACACTAGC",4,40.65,9.9,-0.87,0.09,2.08,1.09,0,">1 nonsynonymous","I28N L122M P149V",3
"lib1","SARS-CoV-2","ATCACTTCCACCATTT",7,68.13,10.62,-0.14,0.04,2.91,1.02,0,">1 nonsynonymous","S184R K198R",2
"lib1","SARS-CoV-2","ATCACTTCGAAGTCAA",1,83.62,9.9,-0.86,0.09,2.06,1.07,0,">1 nonsynonymous","F17Y Y35G",2
"lib1","SARS-CoV-2","ATCACTTGAAAAAAAT",1,13.99,10.44,-0.32,0.07,2.95,1,0,"1 nonsynonymous","D34N",1
"lib1","SARS-CoV-2","ATCACTTGAATAACAG",9,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q A42N T63L T85M V103Y",5
"lib1","SARS-CoV-2","ATCACTTGATGAGGAG",4,6.46,NA,NA,NA,NA,NA,NA,"stop","I28* F44W L60Y G83Q R136S Y165R T170H",7
"lib1","SARS-CoV-2","ATCACTTGTCGCGATC",4,30.26,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","G9P L38Y A105L G116H S129A G172D",6
"lib1","SARS-CoV-2","ATCACTTTATTATGTG",6,80.27,9.85,-0.91,0.07,2.85,1.06,0,"1 nonsynonymous","G166V",1
"lib1","SARS-CoV-2","ATCACTTTGCGTGTAA",1,37.38,9.62,-1.14,0.09,2.79,1.07,0.01,">1 nonsynonymous","Y119T T140D",2
"lib1","SARS-CoV-2","ATCAGAAAACAAGTAC",7,76.39,9.93,-0.83,0.1,2.4,1.05,0,">1 nonsynonymous","V11T Y21H",2
"lib1","SARS-CoV-2","ATCAGAAAACATAAGG",1,5.76,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","V77R D98T A105N N110Y",4
"lib1","SARS-CoV-2","ATCAGAAACCGCAACG",2,2.26,NA,NA,NA,NA,NA,NA,"stop","R16V N64* K87R N107P T201Y",5
"lib1","SARS-CoV-2","ATCAGAAACTTTTGTT",10,102.8,10.6,-0.16,0.07,2.9,1.05,0,">1 nonsynonymous","T100R F134M",2
"lib1","SARS-CoV-2","ATCAGAAATAACAAAC",6,59.02,9.24,-1.52,0.17,1.99,1.18,0.01,">1 nonsynonymous","D97M Y121S E141K",3
"lib1","SARS-CoV-2","ATCAGAAATCATATCG",1,1.89,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","ATCAGAAATTAATCAA",8,66.92,6.01,-4.75,0.97,1.5,1.19,0.02,">1 nonsynonymous","R25V G86W S129Q",3
"lib1","SARS-CoV-2","ATCAGAAATTAGCACA",4,31.71,6.47,-4.3,0.28,1.5,1.07,0,">1 nonsynonymous","T100D Y119C V194I",3
"lib1","SARS-CoV-2","ATCAGAACATCATGTG",11,115.96,10.62,-0.14,0.04,2.9,1.06,0,"1 nonsynonymous","K87H",1
"lib1","SARS-CoV-2","ATCAGAACCGCGCCCA",15,198.64,10.79,0.02,0.06,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCAGAACGACCGATT",2,53.88,10.86,0.09,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGAACGATTATGA",1,8.37,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I104T R127L K132V I142G",4
"lib1","SARS-CoV-2","ATCAGAACTGAAGTAA",1,38.26,10.52,-0.25,0.06,2.83,1.01,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","ATCAGAACTTGAGACT",2,20.9,6.93,-3.84,0.43,1.5,1.08,0.06,">1 nonsynonymous","T3D L57S G174R R179G",4
"lib1","SARS-CoV-2","ATCAGAAGACTAAAAA",1,56.39,10.72,-0.04,0.04,2.96,1.03,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","ATCAGAAGGATGCTGA",7,86.56,10.76,-0.01,0.05,2.93,1.01,0,">1 nonsynonymous","L5H N120S",2
"lib1","SARS-CoV-2","ATCAGAATAAGAATAT",1,1.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","ATCAGAATATGCACGG",3,19.63,10.67,-0.09,0.1,2.88,1.05,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","ATCAGAATTTAAACCA",2,20.96,10.83,0.06,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGACAGGCACGAG",1,22.52,10.89,0.13,0.09,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGACCAACCCAGG",1,9.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4Q S69R N118A S129Y G155N",5
"lib1","SARS-CoV-2","ATCAGACGAAATAAAC",1,56.81,10.22,-0.55,0.06,2.89,1.01,0,">1 nonsynonymous","S45H D98I",2
"lib1","SARS-CoV-2","ATCAGACTACATTATG",6,7.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60H K87R P96I P149W T201R",5
"lib1","SARS-CoV-2","ATCAGACTATAAGGAA",2,17.15,6.94,-3.82,0.49,1.5,1.03,0.07,">1 nonsynonymous","T15S V182K",2
"lib1","SARS-CoV-2","ATCAGACTATGCTGCA",1,114.45,6,-4.76,1.15,1.5,1.12,0.02,">1 nonsynonymous","V37C L125V N171D V181F",4
"lib1","SARS-CoV-2","ATCAGACTCATCTAAA",7,187.79,10.67,-0.1,0.04,2.94,1,0,">1 nonsynonymous","D90S G155R Q163A",3
"lib1","SARS-CoV-2","ATCAGACTTGGTAAGT",3,17.24,6.02,-4.75,1.47,1.5,1.09,0.04,">1 nonsynonymous","F44H F99N L131V",3
"lib1","SARS-CoV-2","ATCAGAGAAAGCATAA",3,8.3,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T15I S69A D98H E154G Y165W",5
"lib1","SARS-CoV-2","ATCAGAGACGCACCAT",3,1.36,NA,NA,NA,NA,NA,NA,"stop","F8S W23L A89* S108G",4
"lib1","SARS-CoV-2","ATCAGAGATAGGTGCT",7,1.52,NA,NA,NA,NA,NA,NA,"stop","P7* P149F",2
"lib1","SARS-CoV-2","ATCAGAGATGAGTACT",3,58.47,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S19R R124S N151S",3
"lib1","SARS-CoV-2","ATCAGAGCAAGGTCAG",6,54.8,9.38,-1.38,0.13,2.02,1.09,0.01,">1 nonsynonymous","G155H V173S",2
"lib1","SARS-CoV-2","ATCAGAGGTCGAGCAA",8,118.02,8.85,-1.92,0.07,2.8,1.12,0,">1 nonsynonymous","P54S L60R Y119D",3
"lib1","SARS-CoV-2","ATCAGAGTGCAACCTT",1,21.44,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T63R A89T S113L",3
"lib1","SARS-CoV-2","ATCAGAGTGTCCACCC",4,42.84,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63Y A89Y N107A Y165C",4
"lib1","SARS-CoV-2","ATCAGAGTGTTCGCAT",7,224.28,8.31,-2.45,0.13,2.25,1.1,0.01,">1 nonsynonymous","E10H Y143E",2
"lib1","SARS-CoV-2","ATCAGATAAAAACCGG",8,158.73,10.74,-0.03,0.06,2.92,1.03,0,">1 nonsynonymous","L60I T201N",2
"lib1","SARS-CoV-2","ATCAGATAAACGTAAT",6,4.29,NA,NA,NA,NA,NA,NA,"stop","V37* Y93S G101* N107L",4
"lib1","SARS-CoV-2","ATCAGATAACATTATG",2,30.85,8.49,-2.27,0.21,1.5,1.07,0.02,">1 nonsynonymous","Y39W C102I Y121A",3
"lib1","SARS-CoV-2","ATCAGATACAAAACCT",5,66.22,10.24,-0.52,0.08,2.89,1.02,0,">1 nonsynonymous","C61V R127K",2
"lib1","SARS-CoV-2","ATCAGATAGAGCATGT",3,8.45,6,-4.76,2,3,1.08,0,">1 nonsynonymous","K56G S113Y L131K P149H",4
"lib1","SARS-CoV-2","ATCAGATCACCGGTTC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","V32N L38* E141A",3
"lib1","SARS-CoV-2","ATCAGATCGATCTAGG",3,65.96,10.78,0.02,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGATCTTCACCAT",12,204.07,10.53,-0.23,0.04,2.89,1.03,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","ATCAGCAAATAGATTA",2,5.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13P E76D",2
"lib1","SARS-CoV-2","ATCAGCAATCAATCGC",16,159.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D34S R127S Y143I",4
"lib1","SARS-CoV-2","ATCAGCACATGACCGA",3,73.29,10.49,-0.27,0.06,2.8,1.09,0,">1 nonsynonymous","Q144R V173F",2
"lib1","SARS-CoV-2","ATCAGCACTGAGCCTG",9,110.82,10.82,0.06,0.07,2.91,1.06,0,"1 nonsynonymous","T148K",1
"lib1","SARS-CoV-2","ATCAGCACTGATTTCC",6,19.96,6,-4.76,2,3,1.2,0,">1 nonsynonymous","C6D V71H",2
"lib1","SARS-CoV-2","ATCAGCATCCATACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15H Y66F C150* L183P",4
"lib1","SARS-CoV-2","ATCAGCATGCATAAGA",3,2.86,NA,NA,NA,NA,NA,NA,"stop","Y39E F99N Y119* P133M",4
"lib1","SARS-CoV-2","ATCAGCCAAGTAAGTA",6,74.56,9.69,-1.08,0.11,1.92,1.06,0,"1 nonsynonymous","D68Y",1
"lib1","SARS-CoV-2","ATCAGCCATCATGCGG",3,68.85,6.05,-4.72,0.41,1.5,1.12,0,">1 nonsynonymous","Q84A T100I S108P Y175H",4
"lib1","SARS-CoV-2","ATCAGCCCTTAAATGA",8,4.49,NA,NA,NA,NA,NA,NA,"stop","N4* K26E F134N",3
"lib1","SARS-CoV-2","ATCAGCCTAACAAACA",4,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M G83L L95R W106M Y119M E141D",6
"lib1","SARS-CoV-2","ATCAGCCTCCACCACA",7,127.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16D Y66S D90W Y119P Q176C R179S",6
"lib1","SARS-CoV-2","ATCAGCCTGGGGACTA",6,7.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9R L60A N107T R127K T201M",5
"lib1","SARS-CoV-2","ATCAGCGACATACTAC",1,45.81,8.83,-1.93,0.08,2.83,1.09,0,">1 nonsynonymous","K87Y S113V",2
"lib1","SARS-CoV-2","ATCAGCGAGAGAGGAA",3,26.66,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","T55I I72T N157L T170A",4
"lib1","SARS-CoV-2","ATCAGCGCGGTTTGTG",2,56.26,10.05,-0.71,0.06,2.85,1,0,">1 nonsynonymous","C31I T55S",2
"lib1","SARS-CoV-2","ATCAGCGGAACGCAAA",2,0.64,NA,NA,NA,NA,NA,NA,"stop","P7V S45* D97L A145L P149T F156C",6
"lib1","SARS-CoV-2","ATCAGCTACTACACTG",4,29.57,10.7,-0.07,0.04,2.96,1.01,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","ATCAGCTCAACCATTC",6,32.48,10.72,-0.05,0.03,2.93,1.06,0,"1 nonsynonymous","F134Q",1
"lib1","SARS-CoV-2","ATCAGCTCAAGACAAC",27,9.51,NA,NA,NA,NA,NA,NA,"stop","T55P S113N S139A G146C A190*",5
"lib1","SARS-CoV-2","ATCAGCTCTAGTAAAG",2,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R G86M D97S P133K",4
"lib1","SARS-CoV-2","ATCAGCTGAACCCCAA",3,51.29,6,-4.76,1.52,1.5,1.15,0.01,">1 nonsynonymous","I28E V71E A105D Y119A",4
"lib1","SARS-CoV-2","ATCAGGAAGACCCGAA",12,6.51,NA,NA,NA,NA,NA,NA,"stop","D34V C49S L57* A105C N120V Q144M Y175I",7
"lib1","SARS-CoV-2","ATCAGGACAAAGCAAA",2,26.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5C F70K S113W N151I",4
"lib1","SARS-CoV-2","ATCAGGACCACGCAAA",5,112.9,10.65,-0.12,0.08,2.89,1.09,0,">1 nonsynonymous","D90N T201R",2
"lib1","SARS-CoV-2","ATCAGGAGCAAACTAT",6,167.96,10.76,-0.01,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGGCAATACAGAT",11,43.96,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N107Y S139E",2
"lib1","SARS-CoV-2","ATCAGGCCACTAACAT",1,36.28,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","T3N A14L D112S T140L Y178I",5
"lib1","SARS-CoV-2","ATCAGGCCCCTGACCG",5,69.64,8.92,-1.85,0.16,1.71,1.21,0.01,">1 nonsynonymous","C6Y A42K Y165F",3
"lib1","SARS-CoV-2","ATCAGGCCGATTTGAC",1,9.87,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G101C L122V S129W",3
"lib1","SARS-CoV-2","ATCAGGCGGATTCCCC",4,1.03,NA,NA,NA,NA,NA,NA,"stop","N1* L57R Y91G E141V",4
"lib1","SARS-CoV-2","ATCAGGCGTTTCTCAT",1,57.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y66H N107D V153H G172N",4
"lib1","SARS-CoV-2","ATCAGGGACATTAAAT",2,100.56,9.29,-1.47,0.05,2.68,1.11,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","ATCAGGGCAGCCATAT",4,61.88,10.62,-0.14,0.04,2.99,1,0,">1 nonsynonymous","E10S S139N",2
"lib1","SARS-CoV-2","ATCAGGGCCTGAAATG",3,35.29,9.37,-1.39,0.12,1.98,1.04,0.01,">1 nonsynonymous","I2K F8A I28L S45K K87V K198R",6
"lib1","SARS-CoV-2","ATCAGGTAAAATTTTC",3,106.99,6.52,-4.24,0.45,1.5,1.22,0.02,">1 nonsynonymous","V37S N120T T170V",3
"lib1","SARS-CoV-2","ATCAGGTACCCCTAAA",3,37.06,10.21,-0.56,0.14,2.09,1.12,0.01,">1 nonsynonymous","N1K L5I V77R T201S",4
"lib1","SARS-CoV-2","ATCAGGTCAAATTACA",5,24.13,8.49,-2.28,0.11,2.62,1.08,0,"1 nonsynonymous","G146I",1
"lib1","SARS-CoV-2","ATCAGGTGTAATTTCA",4,24.99,10.08,-0.68,0.11,2.56,1.03,0.01,">1 nonsynonymous","G116I E186Y",2
"lib1","SARS-CoV-2","ATCAGGTTAAACAAAC",4,19.04,10.12,-0.65,0.22,1.9,1.13,0.02,">1 nonsynonymous","A14K V52Q L60H",3
"lib1","SARS-CoV-2","ATCAGGTTAAATCCTC",5,11.38,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","C49D V77P T100S I142E N157I",5
"lib1","SARS-CoV-2","ATCAGGTTACCCTCTA",5,192.02,8.78,-1.99,0.06,2.63,1.1,0,">1 nonsynonymous","N4L Y119L T201L",3
"lib1","SARS-CoV-2","ATCAGGTTTGCCTAAT",3,25.75,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","Q84D G146A N157T",3
"lib1","SARS-CoV-2","ATCAGTAAAGCATCTT",4,34.72,6.06,-4.71,1.21,1.5,1.15,0.04,">1 nonsynonymous","V65M F99P",2
"lib1","SARS-CoV-2","ATCAGTAAAGTTTCCC",1,30.73,8.38,-2.38,0.23,1.52,1.25,0.03,"1 nonsynonymous","V77S",1
"lib1","SARS-CoV-2","ATCAGTAACATCCCTG",8,22.73,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","R25N D75S V103D",3
"lib1","SARS-CoV-2","ATCAGTAACCCAAACT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","C6N W23E S41H S147*",4
"lib1","SARS-CoV-2","ATCAGTAACGGGTTCG",6,94.83,10.77,0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGTAATATGAGAT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E K94Y R136Q N157K",4
"lib1","SARS-CoV-2","ATCAGTAATATGATAA",2,78.61,10.6,-0.16,0.05,2.85,1.09,0,">1 nonsynonymous","S43V E186D",2
"lib1","SARS-CoV-2","ATCAGTACAATGGGAA",7,54.02,9.74,-1.03,0.18,1.96,1.09,0.01,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","ATCAGTACCCCTCCAC",6,140.89,10.78,0.01,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCAGTACCTCTCCAA",6,0.39,NA,NA,NA,NA,NA,NA,"stop","P7L C102L G117W G152* V181K",5
"lib1","SARS-CoV-2","ATCAGTACTTGCATAA",5,28.89,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N64C I88W T100Y G116R L125E",5
"lib1","SARS-CoV-2","ATCAGTAGAGTCTGAT",4,6.03,NA,NA,NA,NA,NA,NA,"stop","G9* G51Y I142T G174L",4
"lib1","SARS-CoV-2","ATCAGTAGCAACCGTG",3,0.41,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","ATCAGTAGGTGATATT",1,6.68,10.02,-0.74,0.38,1.5,1.19,0.03,">1 nonsynonymous","D90T V103I P149Y",3
"lib1","SARS-CoV-2","ATCAGTCAAATCAGCT",3,46.56,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","A22V D34V Q79K",3
"lib1","SARS-CoV-2","ATCAGTCAATTAAACT",5,39.36,9.19,-1.57,0.2,1.78,1.17,0.02,">1 nonsynonymous","K56S F99W I104M W106I P149T",5
"lib1","SARS-CoV-2","ATCAGTCATTTGCAAC",7,0.34,NA,NA,NA,NA,NA,NA,"stop","V37* I88R P149T E186S",4
"lib1","SARS-CoV-2","ATCAGTCCAGGTAGGT",1,10.24,8.25,-2.51,0.25,1.62,1.19,0.02,">1 nonsynonymous","N64S W106E I142V",3
"lib1","SARS-CoV-2","ATCAGTCGGATCCCTT",5,6.84,8.43,-2.34,0.38,1.57,1.21,0.05,">1 nonsynonymous","C6S A105R L122K N171F",4
"lib1","SARS-CoV-2","ATCAGTCTATCATGAC",3,14.5,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","E10C I28L A42I C61L I72S Y123S C158S",7
"lib1","SARS-CoV-2","ATCAGTCTTTTAGTGT",5,42.36,9.59,-1.17,0.18,1.66,1.12,0.01,">1 nonsynonymous","N58S Q168F F185S",3
"lib1","SARS-CoV-2","ATCAGTGTTAAGTAGT",3,9.31,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10H W23F Y91V C102Y K198M",5
"lib1","SARS-CoV-2","ATCAGTTAAGCATTGT",5,11.84,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V20G S113F",2
"lib1","SARS-CoV-2","ATCAGTTAGAGTACAA",6,27.28,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K26A S43D P82L G116R I138G",5
"lib1","SARS-CoV-2","ATCAGTTGCAAGGCCA",3,109.4,8.23,-2.53,0.19,1.52,1.11,0.01,"1 nonsynonymous","Q176F",1
"lib1","SARS-CoV-2","ATCAGTTGTGTCCAGT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","F12L I28* Y178N T201G",4
"lib1","SARS-CoV-2","ATCAGTTTATAACGGA",1,40.16,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","D98S Y119V G172N",3
"lib1","SARS-CoV-2","ATCAGTTTCGTAACCA",12,71,9.68,-1.09,0.09,2.07,1.06,0,">1 nonsynonymous","C6T S41Y T63P F160M",4
"lib1","SARS-CoV-2","ATCAGTTTTAAGTTAT",9,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S N13S F47L L95F F126V",5
"lib1","SARS-CoV-2","ATCATAAAAAACTATA",6,18.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C31V I72A V103R G152L T201K",5
"lib1","SARS-CoV-2","ATCATAAAACGACGTT",3,11.76,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","S45N C61Y D90H P96R N110L K128N E141N R179S",8
"lib1","SARS-CoV-2","ATCATAAAACGTGTGA",6,2.77,NA,NA,NA,NA,NA,NA,"stop","D98A A105F S113* Q144R S164T",5
"lib1","SARS-CoV-2","ATCATAAAATGAATAG",1,16.22,8.86,-1.91,0.2,1.5,1.11,0.02,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","ATCATAAAATGTGACA",1,31.08,10.07,-0.7,0.08,2.82,1.06,0,">1 nonsynonymous","E10I K87N",2
"lib1","SARS-CoV-2","ATCATAAACACATTAC",1,21.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4V V32F D68Y K94L R127L G155V L162R",7
"lib1","SARS-CoV-2","ATCATAAACATTGTAT",2,224.19,10.35,-0.42,0.04,2.9,1,0,">1 nonsynonymous","R136Q P149K G196L",3
"lib1","SARS-CoV-2","ATCATAAACCCAATAA",2,46.17,10.76,-0.01,0.15,2.9,1.01,0.01,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","ATCATAAAGCACCTAT",8,29.99,7.11,-3.66,0.29,1.5,1.06,0.05,">1 nonsynonymous","W23V A33T L60T Y93C",4
"lib1","SARS-CoV-2","ATCATAAAGCACTAAA",2,16.88,10.71,-0.06,0.07,2.97,1.02,0,">1 nonsynonymous","D97L K199N",2
"lib1","SARS-CoV-2","ATCATAAATCTAGTCC",1,6.32,6.4,-4.37,2,3,1.03,0,">1 nonsynonymous","C6S F70L",2
"lib1","SARS-CoV-2","ATCATAAATTAACACC",8,116.53,8.82,-1.94,0.14,1.81,1.18,0.01,">1 nonsynonymous","Y35E V52C E154C",3
"lib1","SARS-CoV-2","ATCATAAATTTAAGGA",7,25.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5M V37W Y50H I88Y L122S C150D N157K",7
"lib1","SARS-CoV-2","ATCATAACCGAGACCG",10,67,9.59,-1.17,0.13,1.85,1.17,0.01,">1 nonsynonymous","T15V V181M",2
"lib1","SARS-CoV-2","ATCATAACGACTAATG",9,230.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R124S Q176I",2
"lib1","SARS-CoV-2","ATCATAACTAAGATTA",3,9.31,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A14T S43I L57F T100P S164L",5
"lib1","SARS-CoV-2","ATCATAAGAGGATCTA",1,50.7,10.72,-0.05,0.09,2.85,1.08,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","ATCATAAGTTATGCAA",4,27.36,7.93,-2.83,0.37,1.82,1.22,0.05,">1 nonsynonymous","W106R G117E",2
"lib1","SARS-CoV-2","ATCATAATCACACCAA",1,17.96,10.25,-0.51,0.1,2.76,1.05,0,">1 nonsynonymous","V77T N130T",2
"lib1","SARS-CoV-2","ATCATAATGTTAGTGG",7,26.73,10.8,0.04,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCATAATGTTTACTT",1,5.46,10.59,-0.17,0.34,2.76,1.06,0.04,"wildtype","",0
"lib1","SARS-CoV-2","ATCATACAAATACTAG",4,48.39,6.93,-3.83,0.47,1.5,1.17,0.04,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","ATCATACAGAGTAAGA",3,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4M P96R",2
"lib1","SARS-CoV-2","ATCATACAGCACCCAT",8,37.16,6,-4.76,2,1.5,1.39,0.05,">1 nonsynonymous","N1H I88G D98G F156L",4
"lib1","SARS-CoV-2","ATCATACAGCCGAGGC",3,19.73,6.12,-4.65,0.71,1.5,1.18,0.02,">1 nonsynonymous","N40M T46V Y91R D112S E135S",5
"lib1","SARS-CoV-2","ATCATACCAAGAGGAT",1,17.08,10.88,0.11,0.1,2.98,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCATACCACAACACT",5,11.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103H E135D F160Y",3
"lib1","SARS-CoV-2","ATCATACCACGCTATT",1,23.06,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ATCATACCCATCGCTA",1,15.44,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9T R16N G74N G146N G152L",5
"lib1","SARS-CoV-2","ATCATACGAAATTGCA",3,19.25,10.62,-0.14,0.19,2.8,1,0.01,">1 nonsynonymous","I2T T55G D90Y",3
"lib1","SARS-CoV-2","ATCATACGATGATGCT",6,39.57,10.33,-0.43,0.06,2.85,1.04,0,"1 nonsynonymous","N30L",1
"lib1","SARS-CoV-2","ATCATACGCAGATGAA",2,72.12,9.04,-1.73,0.07,2.89,1.11,0,">1 nonsynonymous","L125T F156I",2
"lib1","SARS-CoV-2","ATCATACGTATAACTT",4,50.25,10.64,-0.13,0.08,2.94,1,0,"1 nonsynonymous","S41K",1
"lib1","SARS-CoV-2","ATCATACGTCTAGGCC",1,35.44,9.8,-0.96,0.04,2.99,1,0,">1 nonsynonymous","L5Y T170R",2
"lib1","SARS-CoV-2","ATCATACTAAATAAAA",3,29.98,9.76,-1.01,0.12,2.28,1.07,0.01,">1 nonsynonymous","T3A A22E V32F D98Y",4
"lib1","SARS-CoV-2","ATCATACTAGAAACTA",3,29.3,10.65,-0.12,0.05,2.91,1.08,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","ATCATACTCATAACGT",3,58.84,9.67,-1.1,0.11,2.67,1.06,0,">1 nonsynonymous","T3F R73M P149H",3
"lib1","SARS-CoV-2","ATCATACTGCTGTTGT",1,8.5,6.05,-4.71,0.37,3,1.11,0,">1 nonsynonymous","A14T F99K L122S",3
"lib1","SARS-CoV-2","ATCATACTTAAAATAA",4,2.1,NA,NA,NA,NA,NA,NA,"stop","N92L F99W Y119* H189R",4
"lib1","SARS-CoV-2","ATCATACTTAATGGAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","C61Y I104* T170S",3
"lib1","SARS-CoV-2","ATCATACTTGAGTTTT",4,21.85,9.97,-0.79,0.16,1.96,1.03,0,">1 nonsynonymous","T15M K56R S139H",3
"lib1","SARS-CoV-2","ATCATAGAAATCGCAT",6,47.86,7.67,-3.09,0.29,1.5,1.24,0.03,">1 nonsynonymous","C6L D90L D97L Q163R",4
"lib1","SARS-CoV-2","ATCATAGAAGGAAACT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","N1Y S19* I72S V103G Q168K P177N S184F",7
"lib1","SARS-CoV-2","ATCATAGAGTAAATGA",1,70.06,7.92,-2.84,0.12,1.87,1.14,0,">1 nonsynonymous","N107L G116T Y178F",3
"lib1","SARS-CoV-2","ATCATAGATAAAAAAA",1,15.87,6,-4.76,2,3,1.16,0,">1 nonsynonymous","P7A N13D T55L T63H I80Q I138S",6
"lib1","SARS-CoV-2","ATCATAGATTTAATAG",2,32.36,10.32,-0.44,0.14,2.86,1.07,0.01,"1 nonsynonymous","D98C",1
"lib1","SARS-CoV-2","ATCATAGCAACTGGAA",4,145,8.7,-2.06,0.08,2.59,1.11,0,">1 nonsynonymous","D97E A105Y L125H",3
"lib1","SARS-CoV-2","ATCATAGCACGACCAA",3,19.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15N C61R Y66H R127N T148P",5
"lib1","SARS-CoV-2","ATCATAGCATGCAACG",7,86.54,7.93,-2.83,0.15,1.58,1.14,0.01,">1 nonsynonymous","L5F F99L S113T",3
"lib1","SARS-CoV-2","ATCATAGCCTGAATTA",2,51.02,10.75,-0.01,0.06,2.9,1.06,0,"1 nonsynonymous","D59Q",1
"lib1","SARS-CoV-2","ATCATAGCGCACCAAT",5,106.95,9.09,-1.67,0.06,2.76,1.12,0,">1 nonsynonymous","G117Q F160S A190T",3
"lib1","SARS-CoV-2","ATCATAGGCGTTAACG",4,52.93,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37S F99N R179K",3
"lib1","SARS-CoV-2","ATCATAGTATATATTT",1,43.27,10.4,-0.37,0.06,2.89,1.05,0,">1 nonsynonymous","T85G P149I",2
"lib1","SARS-CoV-2","ATCATAGTTAAGGGGT",1,9.33,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","S41L S108K F156W L183V",4
"lib1","SARS-CoV-2","ATCATATAACCATGTG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","S41V P54* L122I",3
"lib1","SARS-CoV-2","ATCATATCAAAACTTT",3,13.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50A T140S P149S",3
"lib1","SARS-CoV-2","ATCATATCCGACTCGA",4,0.97,NA,NA,NA,NA,NA,NA,"stop","C6F S19W S41*",3
"lib1","SARS-CoV-2","ATCATATCGGTTCTAT",9,67.31,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37S A105P D137N",3
"lib1","SARS-CoV-2","ATCATATGAACAATTA",3,67.83,9.09,-1.68,0.09,2.54,1.11,0,">1 nonsynonymous","N1Y G152Y Q163E",3
"lib1","SARS-CoV-2","ATCATATGACTATAAC",2,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59T A89M G116P R179Q",4
"lib1","SARS-CoV-2","ATCATATGACTATGCT",1,57.83,10.07,-0.7,0.03,2.88,1.03,0,">1 nonsynonymous","N4A N171E",2
"lib1","SARS-CoV-2","ATCATATGAGTAGCCA",7,109.35,10.76,0,0.07,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCATATTACAGGAAA",1,4.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34L",1
"lib1","SARS-CoV-2","ATCATATTGTATCTTC",2,79.38,10.75,-0.01,0.06,2.88,1.03,0,">1 nonsynonymous","Y35V D97T N120Q",3
"lib1","SARS-CoV-2","ATCATCAAACGGGGCG",10,112.02,8.8,-1.96,0.08,2.89,1.11,0,">1 nonsynonymous","L125E F160R",2
"lib1","SARS-CoV-2","ATCATCAAATTGGAAA",3,31.62,8.77,-1.99,0.08,2.93,1.05,0,">1 nonsynonymous","F62L G166L",2
"lib1","SARS-CoV-2","ATCATCAAGCCGCTAG",3,37.33,10.76,0,0.1,2.87,1.1,0,">1 nonsynonymous","I138R P197L",2
"lib1","SARS-CoV-2","ATCATCAATTGACTGA",8,197.69,8.6,-2.16,0.09,2.76,1.05,0,"1 nonsynonymous","S113H",1
"lib1","SARS-CoV-2","ATCATCACAAAAGCGA",5,54.63,8.75,-2.02,0.17,1.64,1.25,0.01,">1 nonsynonymous","V103M L188I",2
"lib1","SARS-CoV-2","ATCATCATATCCATTT",2,32.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K48F A81D Q176R",3
"lib1","SARS-CoV-2","ATCATCATGACTAGCA",8,145.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50V N157L",2
"lib1","SARS-CoV-2","ATCATCCCACGGCGAA",4,12.09,7.92,-2.85,0.36,1.5,1.22,0.05,">1 nonsynonymous","T3C L38T D90I K94G K114L K128A E154M",7
"lib1","SARS-CoV-2","ATCATCCCCACGGTGA",4,71.4,10.44,-0.32,0.06,2.88,1.05,0,">1 nonsynonymous","K114V S139A",2
"lib1","SARS-CoV-2","ATCATCCCCCCCTGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V52T N107K G146T V153*",4
"lib1","SARS-CoV-2","ATCATCCGAATCGGTA",1,52.71,10.5,-0.26,0.07,2.91,1,0,">1 nonsynonymous","T85W T148A",2
"lib1","SARS-CoV-2","ATCATCCGCTGCTATA",3,43.13,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F62T G86Y K94M Y178L",4
"lib1","SARS-CoV-2","ATCATCCTAAGATATC",4,1.91,NA,NA,NA,NA,NA,NA,"stop","F47K F62L P82* G86V P96R Y123V L162S",7
"lib1","SARS-CoV-2","ATCATCGCTGAACAGG",8,15.47,NA,NA,NA,NA,NA,NA,"stop","V71* Y121S P191H",3
"lib1","SARS-CoV-2","ATCATCTAAAGGCACT",6,947.24,9.94,-0.82,0.07,2.07,1.01,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","ATCATCTATACCTTGC",6,65.58,6,-4.76,1.6,2.85,1.15,0,">1 nonsynonymous","I72D G86S W106F I138V Y178F",5
"lib1","SARS-CoV-2","ATCATCTCACCGAAAT",1,12.39,9.38,-1.38,0.15,2.38,1.18,0.02,">1 nonsynonymous","N107K N120F",2
"lib1","SARS-CoV-2","ATCATCTCCTTCGAAA",1,20.34,10.25,-0.51,0.09,2.63,1.02,0.01,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","ATCATCTTAAAACTCA",1,19.2,8.33,-2.43,0.14,2.04,1.04,0,">1 nonsynonymous","P7H F47N P149D G174D",4
"lib1","SARS-CoV-2","ATCATCTTAAATAAAC",5,99.98,7.48,-3.28,0.16,1.85,1.16,0.01,">1 nonsynonymous","A33L Y143D",2
"lib1","SARS-CoV-2","ATCATCTTACAACAAA",1,6.81,10.42,-0.35,0.12,2.92,1.01,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","ATCATGAAACAATGTG",8,1.18,NA,NA,NA,NA,NA,NA,"stop","N1Y G51Y I88S R136* N157K Q168N V182W",7
"lib1","SARS-CoV-2","ATCATGAACCCCGAAC",2,53.44,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","Y21K Y91I P133S G172E",4
"lib1","SARS-CoV-2","ATCATGAACCGATCAC",3,97.07,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20E T63D K94S C158N K198V",5
"lib1","SARS-CoV-2","ATCATGAATAATGAGA",3,93.73,9.93,-0.84,0.06,2.81,1.03,0,">1 nonsynonymous","A14G E154H",2
"lib1","SARS-CoV-2","ATCATGAATCAATACA",3,95.07,6.98,-3.79,0.32,1.5,1.12,0.02,">1 nonsynonymous","C6S V37I V115L G146Y",4
"lib1","SARS-CoV-2","ATCATGACACGATGGT",5,0,NA,NA,NA,NA,NA,NA,"stop","D112K Y119* Y159S",3
"lib1","SARS-CoV-2","ATCATGACACTACATT",12,118.27,9.84,-0.93,0.12,1.88,1.07,0,">1 nonsynonymous","N1V S29H I104S",3
"lib1","SARS-CoV-2","ATCATGACCAAAGCCC",4,14.64,10.71,-0.05,0.12,2.8,1.05,0.01,">1 nonsynonymous","N4P G83N",2
"lib1","SARS-CoV-2","ATCATGACCCTAGGAC",2,8.4,10.03,-0.74,0.15,2.5,1.16,0.01,">1 nonsynonymous","G51L K56S",2
"lib1","SARS-CoV-2","ATCATGACTAACATGT",1,15.73,10.43,-0.33,0.1,2.85,1.13,0,">1 nonsynonymous","P149M T201Q",2
"lib1","SARS-CoV-2","ATCATGACTCAAATAT",10,100.18,10.5,-0.27,0.05,2.92,1.02,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","ATCATGAGGAAGATAA",1,2.31,NA,NA,NA,NA,NA,NA,"stop","V37M D98* Q144M G174V P197R",5
"lib1","SARS-CoV-2","ATCATGATGAGGCTTA",1,8.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3C A18M Y165K T201R",4
"lib1","SARS-CoV-2","ATCATGCATCACCTCA",9,97.26,10.71,-0.05,0.06,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCATGCCTACAAATT",1,35.65,6,-4.76,2,3,1.22,0,">1 nonsynonymous","Y119F C158T",2
"lib1","SARS-CoV-2","ATCATGGAAAGAACAG",3,62.38,10.75,-0.02,0.04,3,1,0,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","ATCATGGACTTAAAAA",1,43.32,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10Y K56R N64K G152P C158K",5
"lib1","SARS-CoV-2","ATCATGTCGAGGCATA",3,27.18,9.97,-0.79,0.3,1.5,1,0.04,">1 nonsynonymous","L5F P82M",2
"lib1","SARS-CoV-2","ATCATGTCTGAACTTA",1,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32M D68M E76K A81D S139C",5
"lib1","SARS-CoV-2","ATCATGTGCTATTACT",7,43.47,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90K F99P N107S S164T",4
"lib1","SARS-CoV-2","ATCATGTGGGAGGATT",5,70.29,10.33,-0.44,0.04,2.85,1.07,0,">1 nonsynonymous","R16N L60P",2
"lib1","SARS-CoV-2","ATCATGTTACTTAAAA",7,27.55,6,-4.76,1.41,1.5,1.22,0.03,">1 nonsynonymous","I2P V11Y R27L F70W F99I G146E",6
"lib1","SARS-CoV-2","ATCATTAAAACGTAGT",7,9.49,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15M S41I F70Y",3
"lib1","SARS-CoV-2","ATCATTAAACCCCACA",6,97.67,10.47,-0.3,0.04,2.88,1.04,0,">1 nonsynonymous","N1A N58L",2
"lib1","SARS-CoV-2","ATCATTAAAGCCGCAT",1,17.49,7.89,-2.87,0.37,1.5,1.13,0.06,">1 nonsynonymous","V37D I88A T148H",3
"lib1","SARS-CoV-2","ATCATTACCATCCTTA",1,26.57,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6A Y39R D97S N157F",4
"lib1","SARS-CoV-2","ATCATTACCCGAATAG",7,82.6,10.02,-0.75,0.09,2.04,1.02,0,">1 nonsynonymous","T3C F8L I104H",3
"lib1","SARS-CoV-2","ATCATTATATGGCGCT",6,96.99,9.99,-0.77,0.06,2.82,1.03,0,">1 nonsynonymous","T85I S129C E154M",3
"lib1","SARS-CoV-2","ATCATTATCCCCAATA",1,24.4,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","A14R L38P G51H P161L",4
"lib1","SARS-CoV-2","ATCATTATCGCCTCCT",6,26.49,9.43,-1.34,0.09,1.95,1.1,0,">1 nonsynonymous","K87S W106S T140R",3
"lib1","SARS-CoV-2","ATCATTATTAAGCTGA",9,80.86,6.11,-4.66,1.1,1.5,1.23,0.03,">1 nonsynonymous","S43Y D68Q",2
"lib1","SARS-CoV-2","ATCATTCAGGAAATCC",9,88.07,6.93,-3.83,0.22,1.5,1.13,0.01,">1 nonsynonymous","N4K R127E S184I",3
"lib1","SARS-CoV-2","ATCATTCATGCGTGGA",3,19.12,10.78,0.02,0.09,2.89,1.07,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","ATCATTCCCACCATCA",3,69.32,10.6,-0.16,0.07,2.85,1.09,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","ATCATTCCCTACACAA",5,88.49,10.66,-0.11,0.07,2.91,1.04,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","ATCATTCCTAGACATC",3,44.11,10.08,-0.69,0.09,2.3,1.02,0,">1 nonsynonymous","T15D K128I S139A",3
"lib1","SARS-CoV-2","ATCATTCTCACAGCAG",2,40.7,10.35,-0.41,0.04,2.93,1,0,">1 nonsynonymous","N4K F44S R78G",3
"lib1","SARS-CoV-2","ATCATTCTTAAAGGTG",9,166.63,6,-4.76,1.98,1.5,1.2,0.01,">1 nonsynonymous","F12L W23M C31R C61N T85N K128N",6
"lib1","SARS-CoV-2","ATCATTGCACGACTGA",1,30.45,6.07,-4.69,0.7,1.5,1.12,0.01,">1 nonsynonymous","G86D L162Y",2
"lib1","SARS-CoV-2","ATCATTGCCGAGAAAG",9,63.98,10.73,-0.03,0.07,2.95,1.04,0,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","ATCATTGCCGGATGGG",2,17.73,8.68,-2.09,0.21,1.99,1.16,0.02,">1 nonsynonymous","R27P A67Y G174E",3
"lib1","SARS-CoV-2","ATCATTGCGAAATGTT",1,5.05,6,-4.76,2,3,1,0,">1 nonsynonymous","N13H Y50S",2
"lib1","SARS-CoV-2","ATCATTGGACGGACGC",2,5.37,10.06,-0.7,0.27,2.34,1.05,0.03,">1 nonsynonymous","I2M E10S D34Y",3
"lib1","SARS-CoV-2","ATCATTGGATCTCACG",3,18.23,10.64,-0.12,0.05,2.97,1.05,0,">1 nonsynonymous","S43D A192L",2
"lib1","SARS-CoV-2","ATCATTGTCGCTTAAT",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H D97L E141C",3
"lib1","SARS-CoV-2","ATCATTTAATCCTCCA",6,50.08,10.61,-0.16,0.04,2.93,1,0,"1 nonsynonymous","I142F",1
"lib1","SARS-CoV-2","ATCATTTAGTTTATAA",2,160.84,10.04,-0.73,0.08,2.35,1.05,0,">1 nonsynonymous","Y39I F44P P54N H189I",4
"lib1","SARS-CoV-2","ATCATTTCAAAATATG",9,79.9,10.67,-0.09,0.08,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCATTTCACTAGCTT",1,18.98,9.04,-1.72,0.35,1.5,1,0.08,">1 nonsynonymous","I2S C61W P82L",3
"lib1","SARS-CoV-2","ATCATTTCCAGCTAAC",1,62.8,10.16,-0.6,0.05,2.82,1.06,0,">1 nonsynonymous","C6S N120K",2
"lib1","SARS-CoV-2","ATCATTTCCTCGGCAC",3,45.7,10.05,-0.72,0.06,2.91,1,0,">1 nonsynonymous","K26E G174R",2
"lib1","SARS-CoV-2","ATCATTTGAGAATCAT",9,85.37,6.89,-3.87,0.27,1.5,1.19,0.01,">1 nonsynonymous","W23E Q144R",2
"lib1","SARS-CoV-2","ATCATTTGCGACGGTA",8,66.67,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G86P K94T K198P",3
"lib1","SARS-CoV-2","ATCATTTGTAACCACC",6,146.72,10.52,-0.25,0.04,2.9,1.04,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","ATCATTTGTTGATATG",3,5.32,6,-4.76,2,1.5,1.35,0.06,">1 nonsynonymous","F70W L122V",2
"lib1","SARS-CoV-2","ATCATTTTAAGGAATA",3,45.16,9.34,-1.42,0.07,2.8,1.12,0,">1 nonsynonymous","G117N K199T",2
"lib1","SARS-CoV-2","ATCATTTTAGCCGTGA",2,15.64,10.23,-0.53,0.19,2.3,1.01,0.02,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","ATCATTTTAGCTGATA",2,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53R A81R W106I S113V",4
"lib1","SARS-CoV-2","ATCATTTTATTCACTG",2,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106T G117W G174I",3
"lib1","SARS-CoV-2","ATCATTTTCAGACCAA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","I2W S29Q V65* F134I",4
"lib1","SARS-CoV-2","ATCATTTTCTGAAAAA",3,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M F99K V103A",3
"lib1","SARS-CoV-2","ATCCAAAAATAACATA",11,100.58,10.72,-0.05,0.05,2.93,1.03,0,"1 nonsynonymous","T3I",1
"lib1","SARS-CoV-2","ATCCAAAACTGTATAT",1,85.78,8.34,-2.43,0.3,1.5,1.09,0.03,">1 nonsynonymous","N118S Q176R H189S",3
"lib1","SARS-CoV-2","ATCCAAAATACTTTGC",1,9.45,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","R124K Y159L",2
"lib1","SARS-CoV-2","ATCCAAAATCTAAGAT",1,12.57,6.73,-4.03,0.31,1.64,1.08,0,">1 nonsynonymous","N40V C49M",2
"lib1","SARS-CoV-2","ATCCAAACACTCGAAA",2,50.19,9.72,-1.05,0.19,1.68,1.06,0.02,">1 nonsynonymous","V11F V52S F134Y",3
"lib1","SARS-CoV-2","ATCCAAACATTCTCTT",4,54.1,6.29,-4.47,0.54,1.5,1.19,0.02,">1 nonsynonymous","S36L P96K Y119A F160S",4
"lib1","SARS-CoV-2","ATCCAAACCTTTTTAT",2,27.72,8.82,-1.95,0.14,2.71,1.05,0.01,">1 nonsynonymous","F44I L60C G166V",3
"lib1","SARS-CoV-2","ATCCAAAGAACACGCG",6,47.48,7.28,-3.48,0.32,1.5,1.12,0.03,">1 nonsynonymous","S41N F62N P133T T140A G152T",5
"lib1","SARS-CoV-2","ATCCAAAGCGAACACG",4,11.77,6,-4.76,0.5,3,1.03,0,">1 nonsynonymous","F44A F99D Y121L T201S",4
"lib1","SARS-CoV-2","ATCCAAAGCTAAGCGA",9,110.52,8.25,-2.51,0.14,1.56,1.18,0.01,">1 nonsynonymous","A145C P161S",2
"lib1","SARS-CoV-2","ATCCAAAGTATCTAAT",10,179.44,10.81,0.05,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCAAAGTCAGTAAC",6,70.58,6.47,-4.3,0.5,1.5,1.21,0.02,">1 nonsynonymous","V71M N157T S200A",3
"lib1","SARS-CoV-2","ATCCAAAGTTAAAACC",1,26.87,10.48,-0.28,0.09,2.82,1.15,0,"1 nonsynonymous","G116D",1
"lib1","SARS-CoV-2","ATCCAAATAAGGCTAA",11,97.73,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C31K S41L D98A A105T L125Q N171D",6
"lib1","SARS-CoV-2","ATCCAAATACCCGCAA",2,62.03,10.32,-0.45,0.07,2.99,1,0,">1 nonsynonymous","A18T C61E K87T",3
"lib1","SARS-CoV-2","ATCCAAATAGCTTCTA",4,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E R27K S41N L57W V182S",5
"lib1","SARS-CoV-2","ATCCAAATATCAATCA",1,75.04,10.22,-0.55,0.07,2.76,1,0,">1 nonsynonymous","G9R F44D N120S",3
"lib1","SARS-CoV-2","ATCCAAATATGTGATT",1,11.7,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","D68M A105N S139T",3
"lib1","SARS-CoV-2","ATCCAAATCCATGACA",3,22.16,10.42,-0.35,0.05,2.87,1.08,0,">1 nonsynonymous","R27N N64G",2
"lib1","SARS-CoV-2","ATCCAAATGGAAAAAA",14,279.68,10.26,-0.51,0.02,2.86,1.03,0,">1 nonsynonymous","N120L E135G",2
"lib1","SARS-CoV-2","ATCCAAATTATCCAGC",3,14.12,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","P82V A105L",2
"lib1","SARS-CoV-2","ATCCAAATTCATTCCG",6,19.99,7.88,-2.88,0.29,1.5,1.17,0.03,">1 nonsynonymous","R25G S41Y N151E",3
"lib1","SARS-CoV-2","ATCCAAATTTATGATA",2,22.62,6,-4.76,1.19,1.5,1.08,0.02,">1 nonsynonymous","L5R D59M R73T T100V S113C K132L",6
"lib1","SARS-CoV-2","ATCCAAATTTTAAGGT",1,24.78,10.07,-0.7,0.09,2.88,1.08,0,">1 nonsynonymous","Q163E S184Y",2
"lib1","SARS-CoV-2","ATCCAACACCGGCCCG",4,7.72,10.99,0.23,0.15,2.84,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCCAACAGCACCTAT",8,0.95,NA,NA,NA,NA,NA,NA,"stop","N107I L122* S139T",3
"lib1","SARS-CoV-2","ATCCAACCCCAGGAAC",5,21.06,9.88,-0.89,0.24,1.7,1.15,0.02,">1 nonsynonymous","N1I S41L A67Y T85R",4
"lib1","SARS-CoV-2","ATCCAACCGCACTCCT",3,40.14,10.68,-0.08,0.08,2.91,1.05,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","ATCCAACCGTAAGAAT",13,78.72,9.96,-0.81,0.13,2.38,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCCAACCGTCAATCA",1,13.86,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","E10D E76D Q84L D90C L95Y",5
"lib1","SARS-CoV-2","ATCCAACGGCGCAGTG",11,94.96,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35T E141G T148V Q176G",4
"lib1","SARS-CoV-2","ATCCAACGGGCTCAAT",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N64Y N107Y T201R",4
"lib1","SARS-CoV-2","ATCCAACTACAGTGGT",5,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A A22N L57Q V103P E135M",5
"lib1","SARS-CoV-2","ATCCAACTATGCTACG",12,202.75,9.68,-1.08,0.09,2.04,1.07,0,">1 nonsynonymous","Y91K G116I T201W",3
"lib1","SARS-CoV-2","ATCCAACTCCATGACA",10,13.3,NA,NA,NA,NA,NA,NA,"stop","P7V S41* K128E C150S",4
"lib1","SARS-CoV-2","ATCCAACTGCAATAAG",3,45.22,10.43,-0.34,0.07,2.95,1,0,">1 nonsynonymous","N1R N4Y E141D",3
"lib1","SARS-CoV-2","ATCCAACTTTTCAAGT",9,0.8,NA,NA,NA,NA,NA,NA,"stop","N4* C31Y Y35P S41V T100C F167C",6
"lib1","SARS-CoV-2","ATCCAAGAAATGGTAG",1,8.82,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V180K",1
"lib1","SARS-CoV-2","ATCCAAGAACCCTTTC",4,33.85,10.74,-0.02,0.07,2.84,1.07,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","ATCCAAGCATTCCGTG",3,19.11,10.75,-0.02,0.06,2.83,1.13,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","ATCCAAGCTGTCAGCG",1,1.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","ATCCAAGGAAAAAAGG",5,125.45,10.64,-0.12,0.05,2.89,1.05,0,">1 nonsynonymous","R27E D75A",2
"lib1","SARS-CoV-2","ATCCAAGGGTAAAGGA",1,41.16,8.37,-2.39,0.25,1.74,1.14,0.03,">1 nonsynonymous","N107M G155A T201S",3
"lib1","SARS-CoV-2","ATCCAAGGGTGCCAAC",2,66.04,10.55,-0.22,0.07,2.93,1,0,">1 nonsynonymous","G9N V65R",2
"lib1","SARS-CoV-2","ATCCAAGTCCATTCGA",1,19.21,6.04,-4.73,0.6,1.59,1.16,0.01,">1 nonsynonymous","L5K Y35S D90I L95E K114I",5
"lib1","SARS-CoV-2","ATCCAAGTTCGAAACG",7,95.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I138M F167Q",2
"lib1","SARS-CoV-2","ATCCAATAAAGCGTGA",8,69.2,10.54,-0.23,0.05,2.91,1.05,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","ATCCAATAAATGCTCC",3,38.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D34G N64Y A89R F167G",4
"lib1","SARS-CoV-2","ATCCAATAAGATCACT",16,105.69,9.48,-1.28,0.15,1.65,1.1,0.01,">1 nonsynonymous","G83E Y123V F160L",3
"lib1","SARS-CoV-2","ATCCAATACATCGCTA",5,1.61,NA,NA,NA,NA,NA,NA,"stop","F47*",1
"lib1","SARS-CoV-2","ATCCAATAGTTGCTTT",1,24.38,6.31,-4.46,0.41,2.11,1.21,0.01,">1 nonsynonymous","K94Q T148R Q176H",3
"lib1","SARS-CoV-2","ATCCAATATAATTCTA",6,1.36,NA,NA,NA,NA,NA,NA,"stop","N4Y K87L N92* L125D N151F G166A",6
"lib1","SARS-CoV-2","ATCCAATATCCTGCTG",4,5.35,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T46D A89F N110K R124H F167D S200M",6
"lib1","SARS-CoV-2","ATCCAATATGGCCATA",4,28.76,6.92,-3.85,0.48,1.5,1.09,0.06,">1 nonsynonymous","G86K D98I A105M N120V",4
"lib1","SARS-CoV-2","ATCCAATCCACTACTG",20,140.98,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C61K I88N Y119V F134S E154D A190N",6
"lib1","SARS-CoV-2","ATCCAATCGTCGCGGC",4,25.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S19A A81P",2
"lib1","SARS-CoV-2","ATCCAATCTGCCACGA",1,97.89,7.92,-2.84,0.3,1.5,1.14,0.03,">1 nonsynonymous","F47T C61E Q176A T201R",4
"lib1","SARS-CoV-2","ATCCAATGCCTTTTCT",4,250.51,10.49,-0.27,0.04,2.94,1.04,0,"1 nonsynonymous","E10G",1
"lib1","SARS-CoV-2","ATCCAATGCTGTCACT",2,34.97,10.44,-0.33,0.08,2.9,1.06,0,">1 nonsynonymous","T85A T170S",2
"lib1","SARS-CoV-2","ATCCAATGCTTGCGCC",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C S43T T55M A89N Y165D",5
"lib1","SARS-CoV-2","ATCCAATGTAACAACA",5,28.27,9.48,-1.28,0.14,1.81,1.05,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","ATCCAATTAAGATCTT",2,23.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A33E K87F D98N S113R N157H K199Q",6
"lib1","SARS-CoV-2","ATCCAATTAAGTCTCC",12,308.35,10.8,0.03,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCACAAAACGTTGA",2,5.06,7.11,-3.65,0.47,1.75,1.12,0.06,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","ATCCACAAAATACACT",6,0.2,NA,NA,NA,NA,NA,NA,"stop","S45G S139V Y159* T201L",4
"lib1","SARS-CoV-2","ATCCACAACACCAACA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","C61V E76* N151E",3
"lib1","SARS-CoV-2","ATCCACAACCACGTCT",9,55.95,6.82,-3.95,0.22,1.5,1.14,0.01,">1 nonsynonymous","K128Y A145P Q163F Q168L",4
"lib1","SARS-CoV-2","ATCCACAATCTAAGGA",2,9.44,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L60T L95P F156L",3
"lib1","SARS-CoV-2","ATCCACAATTATATTG",2,62.67,9.87,-0.89,0.07,2.93,1.03,0,">1 nonsynonymous","N118H F134G",2
"lib1","SARS-CoV-2","ATCCACACATATCTTG",9,109.33,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V11R T46R F62T I88F",4
"lib1","SARS-CoV-2","ATCCACAGACCCGCTG",2,22.53,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","L5G R25L N58E N120D S129E T201Y",6
"lib1","SARS-CoV-2","ATCCACATAAAACATG",5,62.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R27E S129P S139P",3
"lib1","SARS-CoV-2","ATCCACATAAACATAG",1,12.77,7.21,-3.56,0.6,1.5,1.01,0.08,">1 nonsynonymous","Y93A T100S P149A",3
"lib1","SARS-CoV-2","ATCCACATCATCTCAT",3,62.07,10.7,-0.06,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCACATGGTCCACA",1,30.72,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","ATCCACCAACAGGTAG",2,46.13,10.78,0.01,0.08,2.91,1.05,0,"1 nonsynonymous","H189Y",1
"lib1","SARS-CoV-2","ATCCACCATTCTTTAG",2,20.81,10.03,-0.74,0.1,2.28,1,0,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","ATCCACCCAATACAAT",5,78.3,9.15,-1.61,0.1,2.47,1.13,0,">1 nonsynonymous","F12Y K87N",2
"lib1","SARS-CoV-2","ATCCACCGCGGCAATT",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N G116L Y123D",3
"lib1","SARS-CoV-2","ATCCACCGGTCACCAA",1,25.92,10.78,0.02,0.07,2.95,1.05,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","ATCCACCTGTTTTTAA",1,0.59,NA,NA,NA,NA,NA,NA,"stop","N1* V20S Y121Q F156V",4
"lib1","SARS-CoV-2","ATCCACGAATCGCCCT",1,76.47,8.53,-2.24,0.09,2.37,1.06,0,">1 nonsynonymous","F44N N107S",2
"lib1","SARS-CoV-2","ATCCACGAGATGAAGT",1,6.52,10.08,-0.68,0.1,1.98,1.04,0,">1 nonsynonymous","I28T L60R P197T",3
"lib1","SARS-CoV-2","ATCCACGCTTATAAGC",1,16.8,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R124N T148R T170Y",3
"lib1","SARS-CoV-2","ATCCACGTAACGACAA",4,12.78,6,-4.76,2,1.5,1.05,0.02,">1 nonsynonymous","A42F R124V Y143N G155P",4
"lib1","SARS-CoV-2","ATCCACGTTAACTTCG",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y Y121W G174D L183E",4
"lib1","SARS-CoV-2","ATCCACGTTATCATTT",1,451.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9A G86Y G101A G146H N151M P191R",6
"lib1","SARS-CoV-2","ATCCACTAATGTAGTA",5,8,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A42R V103P",2
"lib1","SARS-CoV-2","ATCCACTACAAGACAA",5,52.13,10.44,-0.33,0.14,2.85,1.12,0.01,"1 nonsynonymous","Y39F",1
"lib1","SARS-CoV-2","ATCCACTACATACAAT",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N S113D T140M E154S Q163R T201Y",6
"lib1","SARS-CoV-2","ATCCACTACTAATTAA",4,57.53,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F12H Y50S N64C N107A G166Q",5
"lib1","SARS-CoV-2","ATCCACTATACCTGGA",2,53.64,8.17,-2.6,0.39,1.5,1,0.06,">1 nonsynonymous","Y91V N107Q S129K E141T",4
"lib1","SARS-CoV-2","ATCCACTCCTAAGAGT",4,32.09,6.35,-4.42,0.95,1.5,1.32,0.06,">1 nonsynonymous","A42E P82E D90P",3
"lib1","SARS-CoV-2","ATCCACTGCAAGACCA",6,86.69,8.9,-1.87,0.24,1.5,1,0.02,">1 nonsynonymous","G51A P133M",2
"lib1","SARS-CoV-2","ATCCACTGCTAACTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A22* S45H T100C E135G",4
"lib1","SARS-CoV-2","ATCCACTGTAATGTCA",6,78.35,8.13,-2.63,0.17,2.26,1.21,0.01,">1 nonsynonymous","E141Y N151V Y175N",3
"lib1","SARS-CoV-2","ATCCAGAAAATGATTA",6,76.11,10.78,0.02,0.04,2.96,1,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","ATCCAGAAATCTGGGT",6,2.47,NA,NA,NA,NA,NA,NA,"stop","C61A S129N F167K V173*",4
"lib1","SARS-CoV-2","ATCCAGAACTAAGACT",4,33.83,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","G86T Y93P",2
"lib1","SARS-CoV-2","ATCCAGAATTAAGATT",3,150.89,10.78,0.02,0.04,2.96,1.01,0,">1 nonsynonymous","L188V K199I",2
"lib1","SARS-CoV-2","ATCCAGACAAGTTCAA",3,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I D97Y C158W T170N T201R",5
"lib1","SARS-CoV-2","ATCCAGACACTCTAAA",3,31.6,10.78,0.01,0.08,2.88,1.08,0,">1 nonsynonymous","R16H I28W T100V N109V L122I P197Q",6
"lib1","SARS-CoV-2","ATCCAGAGAGATATAG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81C N92Q I104P R179M K198G",5
"lib1","SARS-CoV-2","ATCCAGAGCACAGCTG",7,117.4,9.78,-0.99,0.1,2.2,1.04,0,">1 nonsynonymous","C6N F185Y",2
"lib1","SARS-CoV-2","ATCCAGATAACCCTTG",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y N64V P169Y",3
"lib1","SARS-CoV-2","ATCCAGATATTCTAAC",7,27.62,8.96,-1.8,0.11,2.67,1.14,0.01,">1 nonsynonymous","A105I T170S",2
"lib1","SARS-CoV-2","ATCCAGATTTTACCCT",5,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M D137L V180S T201V",4
"lib1","SARS-CoV-2","ATCCAGCATTACTTTC",3,15.04,6,-4.76,2,3,1.2,0,">1 nonsynonymous","I88A G101R L183F",3
"lib1","SARS-CoV-2","ATCCAGCCCCAAGAGG",6,35.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y K56I Y121D P133M",4
"lib1","SARS-CoV-2","ATCCAGCGCACACTCT",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R C49F K87T R124S",4
"lib1","SARS-CoV-2","ATCCAGCGCGTAATTA",24,38.79,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L95A S139G L183S",3
"lib1","SARS-CoV-2","ATCCAGCTCTAAAACC",1,20.82,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","T3R N64P N107G L162M",4
"lib1","SARS-CoV-2","ATCCAGGAACTTGCGG",4,65.57,9.59,-1.17,0.12,2.05,1.09,0.01,">1 nonsynonymous","S45L G155R",2
"lib1","SARS-CoV-2","ATCCAGGATTTCTACA",4,1988.39,10.62,-0.14,0.03,2.92,1.03,0,"1 nonsynonymous","T100V",1
"lib1","SARS-CoV-2","ATCCAGGTATCGAACA",3,72.1,10.75,-0.01,0.06,2.92,1.04,0,"1 nonsynonymous","S36K",1
"lib1","SARS-CoV-2","ATCCAGGTCACCATGA",3,55.25,6.27,-4.49,0.54,1.5,1.2,0.02,">1 nonsynonymous","S43R A89G G101L",3
"lib1","SARS-CoV-2","ATCCAGGTCGCTTTTG",1,106.88,10.6,-0.16,0.07,2.89,1.07,0,">1 nonsynonymous","R27S S200I",2
"lib1","SARS-CoV-2","ATCCAGTAAACATTCC",1,21.03,8.49,-2.28,0.16,1.93,1.12,0.01,">1 nonsynonymous","T3R Q84Y E154F",3
"lib1","SARS-CoV-2","ATCCAGTAGAGCCCGA",2,20.97,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12S F70K F99L S113N P133R G155T",6
"lib1","SARS-CoV-2","ATCCAGTAGGAAAGAC",3,51.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6S S139T F167C",3
"lib1","SARS-CoV-2","ATCCAGTATGATGAGA",1,11.55,10.91,0.14,0.1,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCAGTGAGTAAGAG",8,182.75,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5P Y93R F167I",3
"lib1","SARS-CoV-2","ATCCAGTGATACGGTC",4,29.73,8.47,-2.3,0.21,1.5,1.07,0.02,">1 nonsynonymous","W106N S129G",2
"lib1","SARS-CoV-2","ATCCAGTGCAAATAAA",7,14.89,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D59S V103A G146V",3
"lib1","SARS-CoV-2","ATCCAGTGCTCTTACT",1,16.83,9.65,-1.12,0.12,1.94,1.03,0.01,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","ATCCAGTGGAATTTGT",6,6.76,9.02,-1.74,0.25,2.86,1.25,0.02,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATCCATAAAATCAAAG",3,68.11,10.62,-0.14,0.03,2.94,1.03,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","ATCCATAACCCATCTT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","Y123F F167I G172M V181* K198E",5
"lib1","SARS-CoV-2","ATCCATAAGCAACGAA",11,264.56,9.16,-1.6,0.05,2.82,1.11,0,">1 nonsynonymous","L5F Q84G G117V",3
"lib1","SARS-CoV-2","ATCCATAATCAAGTAA",4,17.8,6,-4.76,2,3,1.16,0.01,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","ATCCATACAGCTACAA",1,1.56,NA,NA,NA,NA,NA,NA,"stop","S41P C49L T55I T100L I104*",5
"lib1","SARS-CoV-2","ATCCATACCTAGATTT",6,107.43,9.14,-1.62,0.08,2.69,1.12,0,">1 nonsynonymous","K87L Y121R",2
"lib1","SARS-CoV-2","ATCCATACGGATGCAG",8,46.56,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","I2N A33S N40H S164D V181N",5
"lib1","SARS-CoV-2","ATCCATAGGTAAAAAG",2,10.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V37L P96L A105S P149T",4
"lib1","SARS-CoV-2","ATCCATATAATTTACT",4,16.58,7.68,-3.09,0.52,1.5,1,0.07,">1 nonsynonymous","C6G A42G D59I V103R F156S Q168L",6
"lib1","SARS-CoV-2","ATCCATATACTACCCC",1,40.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A L60M D98T Y143P",4
"lib1","SARS-CoV-2","ATCCATATGGAGATAT",2,7.54,10.06,-0.7,0.08,2.8,1,0,">1 nonsynonymous","A14C L60H F160Q",3
"lib1","SARS-CoV-2","ATCCATATTCTTACTA",1,46.7,10.27,-0.5,0.08,2.87,1.04,0,">1 nonsynonymous","Y39T G83N I138S F156W",4
"lib1","SARS-CoV-2","ATCCATCACCAATATG",8,217.65,10.69,-0.08,0.05,2.92,1.04,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","ATCCATCATCACCCAG",4,57.43,10.2,-0.56,0.1,2.69,1.02,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","ATCCATCCATAAGCCA",2,8.93,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D34L P96L L122P",3
"lib1","SARS-CoV-2","ATCCATCGAATTAAAA",10,48.36,9.5,-1.26,0.17,1.5,1.09,0.01,">1 nonsynonymous","N1F T63K I104G",3
"lib1","SARS-CoV-2","ATCCATCGAGCATACT",2,25.49,10.59,-0.18,0.1,2.9,1.03,0,">1 nonsynonymous","N1R K56F N171T",3
"lib1","SARS-CoV-2","ATCCATCTAACTCCCA",3,27.53,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6V F47M K94C Y121F",4
"lib1","SARS-CoV-2","ATCCATCTACATGGCA",2,12.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F17C Y39K C49A",3
"lib1","SARS-CoV-2","ATCCATCTCAAAAAAT",3,167.63,8.04,-2.73,0.23,1.54,1.17,0.02,">1 nonsynonymous","F44D N118G P177S",3
"lib1","SARS-CoV-2","ATCCATCTCAGAGACA",1,8.2,6,-4.76,2,3,1.27,0.05,">1 nonsynonymous","T15K R27V P54Y S139M Y143I Q163I",6
"lib1","SARS-CoV-2","ATCCATCTCCTCAAAT",3,29.67,9.94,-0.83,0.12,2.61,1.06,0,">1 nonsynonymous","C31K L57F",2
"lib1","SARS-CoV-2","ATCCATGACGAAAATG",2,10.73,10.88,0.11,0.07,2.92,1.08,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","ATCCATGACGAACCAA",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L K114L G146T",3
"lib1","SARS-CoV-2","ATCCATGTAAATTGAC",5,36.81,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P7T T15L F134P E154D",4
"lib1","SARS-CoV-2","ATCCATGTACAGGACG",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T170R V180D",2
"lib1","SARS-CoV-2","ATCCATTAAACTACAG",9,23.18,10.87,0.1,0.09,2.92,1.01,0,">1 nonsynonymous","L5V N64T",2
"lib1","SARS-CoV-2","ATCCATTCCTCACGCC",2,30.38,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82T A105R G146V",3
"lib1","SARS-CoV-2","ATCCATTCGTACTATA",5,38.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L N120K",2
"lib1","SARS-CoV-2","ATCCATTCTAGGGGAT",7,129.81,10.26,-0.5,0.03,2.88,1,0,"1 nonsynonymous","W106Y",1
"lib1","SARS-CoV-2","ATCCATTGCCAGCGGC",3,110.5,8.44,-2.32,0.19,1.81,1.13,0.01,">1 nonsynonymous","G9K K87S N118I K199I",4
"lib1","SARS-CoV-2","ATCCATTGGATCTTAT",3,49.75,10.45,-0.31,0.07,2.91,1.06,0,">1 nonsynonymous","Y39S S45D I138H",3
"lib1","SARS-CoV-2","ATCCATTTTAACACGC",7,89.6,10.68,-0.09,0.06,2.88,1.05,0,">1 nonsynonymous","L5R Y66V L122E",3
"lib1","SARS-CoV-2","ATCCCAAAACAGACAC",2,25.89,10.4,-0.37,0.05,2.91,1.08,0,">1 nonsynonymous","L60K D97S",2
"lib1","SARS-CoV-2","ATCCCAAACGGATACT",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105S R136L P161L G174L P197I",5
"lib1","SARS-CoV-2","ATCCCAAATACAGAAT",9,188.3,10.76,0,0.07,2.87,1.05,0,"1 nonsynonymous","N64S",1
"lib1","SARS-CoV-2","ATCCCAACAAGATCGT",6,24.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40P T100K G117T Y159G",4
"lib1","SARS-CoV-2","ATCCCAACCTCCTTGT",3,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S F99R",2
"lib1","SARS-CoV-2","ATCCCAAGCTCAAAAG",10,2.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38Q",1
"lib1","SARS-CoV-2","ATCCCAAGTTGCAGGC",7,2.7,NA,NA,NA,NA,NA,NA,"stop","I2S Y35S D68W F99* N107E T140R Q176L",7
"lib1","SARS-CoV-2","ATCCCAAGTTGCGACG",4,45.53,6,-4.76,0.72,2.59,1.11,0.01,">1 nonsynonymous","S19R F70T D98N E154N",4
"lib1","SARS-CoV-2","ATCCCAATAAGAGGAT",3,16.62,6.1,-4.67,1.39,1.5,1.23,0.06,">1 nonsynonymous","Y39V N118D P133T G146T",4
"lib1","SARS-CoV-2","ATCCCAATACAACCGA",6,0.7,NA,NA,NA,NA,NA,NA,"stop","D34V L60* P82G N120*",4
"lib1","SARS-CoV-2","ATCCCAATATCAAAGG",5,43.32,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","L5Y A81P F99S E141N",4
"lib1","SARS-CoV-2","ATCCCAATCAAGTGGG",1,4.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","ATCCCAATTTCGAGTT",4,71.9,7.06,-3.7,0.14,1.5,1.11,0,">1 nonsynonymous","Y21S Y39R G152I",3
"lib1","SARS-CoV-2","ATCCCACCACAAGAGG",5,14.58,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T15I R127T",2
"lib1","SARS-CoV-2","ATCCCACCCATTTAAA",2,13.81,10.37,-0.39,0.06,2.88,1.06,0,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","ATCCCACCTATCAAAA",6,0.35,NA,NA,NA,NA,NA,NA,"stop","V37T C49Y K87F Y175*",4
"lib1","SARS-CoV-2","ATCCCACGCGCACAGG",8,111.09,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y39R K87S I104G S139N Y175L",5
"lib1","SARS-CoV-2","ATCCCACGGTCTTAGC",4,50.01,7,-3.76,0.1,1.5,1.11,0,">1 nonsynonymous","Y35I T100R Q176F",3
"lib1","SARS-CoV-2","ATCCCACGTCCAACCA",3,62.37,10.3,-0.47,0.11,2.72,1.06,0,">1 nonsynonymous","T3A I80L",2
"lib1","SARS-CoV-2","ATCCCACTACTACACT",4,21.46,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","L5R I80F E135Y R179N",4
"lib1","SARS-CoV-2","ATCCCACTCGTGAATT",8,57.44,7.04,-3.72,0.29,1.5,1.11,0.02,">1 nonsynonymous","G86R S184R",2
"lib1","SARS-CoV-2","ATCCCAGCTTTCAGGG",4,1.11,NA,NA,NA,NA,NA,NA,"stop","A42M G83V R127* V180F",4
"lib1","SARS-CoV-2","ATCCCAGGATGTGGGG",6,28.37,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K94M I104R K114S Y175T",4
"lib1","SARS-CoV-2","ATCCCAGTCAAACAAC",3,16.16,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","W23C S41P K56L P149V",4
"lib1","SARS-CoV-2","ATCCCAGTGTACTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C R127I",2
"lib1","SARS-CoV-2","ATCCCAGTTAGCAATT",1,36.62,10.59,-0.17,0.05,2.95,1.02,0,">1 nonsynonymous","T85G V173I",2
"lib1","SARS-CoV-2","ATCCCATAAAGATGAA",6,119.12,10.77,0,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCCATAACTATACT",5,98.14,10.62,-0.14,0.03,2.93,1.03,0,">1 nonsynonymous","N58A T148M T201S",3
"lib1","SARS-CoV-2","ATCCCATAAGACCCAG",8,1.26,NA,NA,NA,NA,NA,NA,"stop","D34L K87S D137*",3
"lib1","SARS-CoV-2","ATCCCATAGTTGACAA",5,55.37,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F8S N120T Y159D",3
"lib1","SARS-CoV-2","ATCCCATCCGTCCGCA",2,77.65,8.58,-2.19,0.12,2.58,1.05,0.01,">1 nonsynonymous","F47W Y143E",2
"lib1","SARS-CoV-2","ATCCCATCGCTTGACC",1,23.81,10.81,0.04,0.1,2.92,1,0.01,">1 nonsynonymous","I2C T15E V37F",3
"lib1","SARS-CoV-2","ATCCCATGAGGTATAT",3,71.56,10.26,-0.5,0.03,2.91,1.04,0,">1 nonsynonymous","P7Y L122W",2
"lib1","SARS-CoV-2","ATCCCATTGCATATGT",2,57.61,8.43,-2.33,0.12,2.78,1.02,0.01,">1 nonsynonymous","G9N G51N T85W Q168K",4
"lib1","SARS-CoV-2","ATCCCCAAAAAGCTGG",3,21.92,8.96,-1.8,0.26,1.5,1,0.03,">1 nonsynonymous","L57R A81T",2
"lib1","SARS-CoV-2","ATCCCCAATTCTTGTT",3,50.57,10.27,-0.49,0.05,2.88,1.07,0,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","ATCCCCAGCCACGTAA",6,40.73,10.58,-0.19,0.09,2.77,1.13,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","ATCCCCATAGTCAGCA",7,22.93,8.66,-2.1,0.25,1.78,1.1,0.03,">1 nonsynonymous","T3H A14G D90L F160L",4
"lib1","SARS-CoV-2","ATCCCCATTCATATCT",7,92.62,10.72,-0.04,0.08,2.91,1.01,0,">1 nonsynonymous","T63K L122F T201L",3
"lib1","SARS-CoV-2","ATCCCCCAAATTAAGC",5,40.39,6,-4.76,0.96,1.5,1.17,0.01,">1 nonsynonymous","E10V G51K C102R Y121V",4
"lib1","SARS-CoV-2","ATCCCCCACAGTTCGC",5,55.98,10.63,-0.13,0.09,2.81,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCCCCATCCTGGGA",4,114.01,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C6R V20Q S29G V37L Y50P L122T G146A G174S",8
"lib1","SARS-CoV-2","ATCCCCCCAACTTTTA",11,217.28,10.76,-0.01,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCCCCCACTAACCC",5,165.21,10.74,-0.02,0.06,2.85,1.12,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","ATCCCCCCATTGACTA",3,70.5,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Q84V N92K F167R P177T T201M",5
"lib1","SARS-CoV-2","ATCCCCCGAAAATGAC",2,79.95,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A89H Q176S",2
"lib1","SARS-CoV-2","ATCCCCCGCGACATAA",14,185.31,10.72,-0.05,0.06,2.87,1.06,0,">1 nonsynonymous","V37G P149H",2
"lib1","SARS-CoV-2","ATCCCCCGCGTAGGCA",11,141.08,10.14,-0.63,0.07,2.81,1.01,0,">1 nonsynonymous","F44T G116H",2
"lib1","SARS-CoV-2","ATCCCCCGCTAATCTC",1,18.33,9.49,-1.28,0.1,2.86,1.02,0.01,"1 nonsynonymous","T170E",1
"lib1","SARS-CoV-2","ATCCCCGAACATATTT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I D34R N118A",3
"lib1","SARS-CoV-2","ATCCCCGATAAAACCA",8,62.3,6.28,-4.48,0.68,1.5,1.22,0.03,">1 nonsynonymous","R25T V103G D112V R179L",4
"lib1","SARS-CoV-2","ATCCCCGCCGAAGGCC",1,58.24,10.82,0.05,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCCCGGGTCCTACT",4,46.47,10.62,-0.14,0.05,2.94,1,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","ATCCCCGGTATAAAAA",6,79.31,10.73,-0.03,0.05,2.9,1.05,0,">1 nonsynonymous","Y39A N120E E141V",3
"lib1","SARS-CoV-2","ATCCCCTAATATTAAG",4,5.96,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16N L60F A145P V182D",4
"lib1","SARS-CoV-2","ATCCCCTATACATATC",1,1.11,NA,NA,NA,NA,NA,NA,"stop","N58M Y91R R127H G146* Y175*",5
"lib1","SARS-CoV-2","ATCCCGAAAATTAAAT",3,89.67,8.63,-2.13,0.14,2.76,1.09,0.01,">1 nonsynonymous","T15A Y119E K132L G174A K199C",5
"lib1","SARS-CoV-2","ATCCCGAAAGGTTCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S K114Y L131S V173W S200Y",5
"lib1","SARS-CoV-2","ATCCCGACTAATTCTG",4,39.36,10.77,0,0.09,2.92,1.04,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","ATCCCGAGCTTGGCGT",1,60.76,10.78,0.01,0.08,2.73,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCCGATACTGGGAG",3,22.59,10.06,-0.7,0.08,2.89,1,0,">1 nonsynonymous","F44V K56C",2
"lib1","SARS-CoV-2","ATCCCGATGAACTCCT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F D75T L122I C150E",4
"lib1","SARS-CoV-2","ATCCCGATTCATATGA",1,15.24,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22E Y93D",2
"lib1","SARS-CoV-2","ATCCCGCAAACTTACA",6,137.05,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y35P K87I N92L F134G P149H Q176V",6
"lib1","SARS-CoV-2","ATCCCGCACGCAAAAA",2,16.94,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D112N Y123S E141C",3
"lib1","SARS-CoV-2","ATCCCGCCAAAAATTA",7,30.62,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A14L R25Q F70R C102I",4
"lib1","SARS-CoV-2","ATCCCGGACGCCTAAC",6,21.66,9.72,-1.05,0.14,2.16,1.09,0,">1 nonsynonymous","E10R S19T A33Y Y123W",4
"lib1","SARS-CoV-2","ATCCCGGCTCAAAAAG",3,48.69,6.54,-4.23,0.61,1.5,1.16,0.03,">1 nonsynonymous","L38T K87R A105Q G116I G172V T201D",6
"lib1","SARS-CoV-2","ATCCCGTACCAAACGA",1,18.52,6.11,-4.65,0.49,1.5,1.08,0.01,">1 nonsynonymous","D68G E141V",2
"lib1","SARS-CoV-2","ATCCCGTGAACAGTAG",10,188.4,10.26,-0.51,0.04,2.74,1.02,0,">1 nonsynonymous","L5T K128F G152R",3
"lib1","SARS-CoV-2","ATCCCGTTCATGACTT",4,66.28,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25I K56V G146S Y159H",4
"lib1","SARS-CoV-2","ATCCCTAAAAATACTA",9,34.97,10.25,-0.51,0.1,2.79,1.01,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","ATCCCTAACTAACAAT",3,104.44,8.58,-2.18,0.11,2.78,1.07,0,">1 nonsynonymous","G74C L125N K132M T201P",4
"lib1","SARS-CoV-2","ATCCCTACAATATTAT",2,20.13,7.83,-2.94,0.34,1.5,1.17,0.04,">1 nonsynonymous","A42K V77E L95M",3
"lib1","SARS-CoV-2","ATCCCTACTCTACACG",3,9.1,10.42,-0.35,0.31,1.67,1,0.05,">1 nonsynonymous","S19G R73E",2
"lib1","SARS-CoV-2","ATCCCTACTTTAGCGG",1,2.59,NA,NA,NA,NA,NA,NA,"stop","E10* C49L K94D K128W F134R",5
"lib1","SARS-CoV-2","ATCCCTAGTATACCAA",5,77.42,10.68,-0.08,0.07,2.91,1.06,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","ATCCCTATGCGAAGCG",5,81.55,7.12,-3.64,0.19,1.5,1.11,0.01,">1 nonsynonymous","K56S I104M S129T C158N",4
"lib1","SARS-CoV-2","ATCCCTCACTCCAATG",6,67.12,10.82,0.05,0.08,2.94,1.03,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","ATCCCTCCGATTCTCT",1,16.35,10.2,-0.56,0.24,1.95,1.12,0.03,">1 nonsynonymous","A42S L60R D90T G146A",4
"lib1","SARS-CoV-2","ATCCCTGGCTGCCAGC",2,8.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5S N30R I80Q W106F D112I L122W S200Q",7
"lib1","SARS-CoV-2","ATCCCTTAGGCCTTGA",1,9.73,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R73W I88A F134H Q168C",4
"lib1","SARS-CoV-2","ATCCCTTATCCATATA",8,41.48,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10Q V37S T100N D112H",4
"lib1","SARS-CoV-2","ATCCCTTCATTTATAT",2,17.55,9.2,-1.56,0.23,2.05,1.12,0.02,">1 nonsynonymous","I2R K56A S139L G155R",4
"lib1","SARS-CoV-2","ATCCCTTGGTGCGTAG",9,115,10.59,-0.17,0.03,2.9,1.04,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","ATCCCTTTATTAAAGA",2,0.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180K",1
"lib1","SARS-CoV-2","ATCCCTTTCAATTTTG",3,33.8,8.75,-2.02,0.21,1.5,1.16,0.02,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","ATCCGAAATGTGATAT",3,111.84,9.61,-1.16,0.1,2.46,1.04,0,">1 nonsynonymous","P7M N120V V173G",3
"lib1","SARS-CoV-2","ATCCGAACAGTTTTAA",6,22.39,6,-4.76,2,3,1.39,0.02,">1 nonsynonymous","N4M V103Y",2
"lib1","SARS-CoV-2","ATCCGAACTGCAGTTA",1,37.02,8.43,-2.34,0.25,1.94,1.19,0.03,">1 nonsynonymous","Y119T D137C",2
"lib1","SARS-CoV-2","ATCCGAACTTTACCTA",7,247.56,9.27,-1.5,0.06,2.82,1.12,0,"1 nonsynonymous","G166K",1
"lib1","SARS-CoV-2","ATCCGAATGTATCCAG",3,55.12,6.38,-4.39,0.62,1.5,1.15,0.03,">1 nonsynonymous","N30L C150S",2
"lib1","SARS-CoV-2","ATCCGACACTTAGGTA",6,109.48,10.62,-0.14,0.03,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCGACAGAGAGGTG",8,50.59,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G86E F99D N107H S129L Q144P",5
"lib1","SARS-CoV-2","ATCCGACATATTACCA",2,27.96,10.24,-0.52,0.06,2.92,1,0,">1 nonsynonymous","C6S T201L",2
"lib1","SARS-CoV-2","ATCCGACATGGTCGCA",2,23.36,10.94,0.17,0.09,2.82,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCGACCCATCTTGA",1,13.19,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V20L I72K",2
"lib1","SARS-CoV-2","ATCCGACCCGAAAAAT",2,25.98,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C49A G83A N120E R127S P149T",5
"lib1","SARS-CoV-2","ATCCGACCTTAAGTGA",4,22.45,9.32,-1.45,0.21,1.79,1.07,0.04,">1 nonsynonymous","I2Y G51C P169V",3
"lib1","SARS-CoV-2","ATCCGACGACAAAGTA",4,15.5,10.3,-0.47,0.12,2.38,1.03,0.01,"1 nonsynonymous","W23P",1
"lib1","SARS-CoV-2","ATCCGACTGCCTTTCA",5,115.21,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G86P Y119M Y143L",3
"lib1","SARS-CoV-2","ATCCGAGCGGGCTAAA",2,61.58,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","K94G N120V R127G V173M",4
"lib1","SARS-CoV-2","ATCCGATATTGCCATT",13,277.53,9.92,-0.84,0.07,2.3,1.04,0,"1 nonsynonymous","V20S",1
"lib1","SARS-CoV-2","ATCCGATCGCACTTTG",2,57.1,6.52,-4.25,0.49,1.5,1.31,0.02,">1 nonsynonymous","D97S F156S Y178D",3
"lib1","SARS-CoV-2","ATCCGATGAGAGACTA",5,113.53,10.56,-0.2,0.03,2.94,1.02,0,"1 nonsynonymous","N4F",1
"lib1","SARS-CoV-2","ATCCGATGTCTTCCCA",5,87,10.58,-0.18,0.06,2.79,1.1,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","ATCCGATTGCGAAATC",7,22.78,6.91,-3.86,0.38,1.5,1.07,0.03,">1 nonsynonymous","T55R A105R K114E Y175F",4
"lib1","SARS-CoV-2","ATCCGCACGCGGTATG",1,32.5,9.11,-1.65,0.11,2.2,1.06,0,">1 nonsynonymous","F44R K128D F160L G174M",4
"lib1","SARS-CoV-2","ATCCGCAGTCATCCAG",3,58.15,10.09,-0.68,0.09,2.32,1.02,0,">1 nonsynonymous","S43T G83D E186G",3
"lib1","SARS-CoV-2","ATCCGCCAAGGTTTGT",5,36.62,10.44,-0.32,0.06,2.93,1,0,"1 nonsynonymous","A145E",1
"lib1","SARS-CoV-2","ATCCGCCCAACAGGAG",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y D59R T85M C102T G155Y",5
"lib1","SARS-CoV-2","ATCCGCCCAACGTATA",9,126.5,10.75,-0.01,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCGCCCACCTTATT",2,56.78,10.94,0.18,0.08,2.9,1.05,0,"1 nonsynonymous","Y35W",1
"lib1","SARS-CoV-2","ATCCGCCCTAGCAGGT",4,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S Y159L",2
"lib1","SARS-CoV-2","ATCCGCCTACCCGGAA",2,49.33,10.13,-0.63,0.07,2.34,1.02,0,">1 nonsynonymous","N13T G83S",2
"lib1","SARS-CoV-2","ATCCGCGAAAACAGAG",3,35.39,6,-4.76,2,1.5,1.16,0.03,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","ATCCGCGAAATAAAGT",5,2.41,NA,NA,NA,NA,NA,NA,"stop","K87V I142N C150* Y159N",4
"lib1","SARS-CoV-2","ATCCGCGCAAGTCACT",9,40.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80F N110R",2
"lib1","SARS-CoV-2","ATCCGCGTACTTAGTA",11,18.15,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","S41T V103G P149W",3
"lib1","SARS-CoV-2","ATCCGCGTTACACGAT",8,83.68,8.72,-2.04,0.14,2.46,1.13,0.01,">1 nonsynonymous","D98S S139T F167W",3
"lib1","SARS-CoV-2","ATCCGCTAATTAGACC",6,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K P54H T55W Q144Y",4
"lib1","SARS-CoV-2","ATCCGCTATACGTCAA",1,61.27,6,-4.76,1.89,1.5,1.14,0,">1 nonsynonymous","P54A G101N I142W Q176S S200Y",5
"lib1","SARS-CoV-2","ATCCGCTTAACGACGA",1,52.96,10.87,0.1,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCGGAAATATGTTT",13,107.15,10.38,-0.38,0.04,2.85,1,0,">1 nonsynonymous","L122S R136T V153L",3
"lib1","SARS-CoV-2","ATCCGGAAGTGTAAAT",2,25.13,10.69,-0.07,0.07,2.92,1.06,0,"1 nonsynonymous","S29T",1
"lib1","SARS-CoV-2","ATCCGGACCAGTCGTT",5,125.73,9.31,-1.46,0.06,2.3,1.09,0,">1 nonsynonymous","R16Y K87A F134M E141L",4
"lib1","SARS-CoV-2","ATCCGGAGTACATAAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","G155*",1
"lib1","SARS-CoV-2","ATCCGGAGTCGTCCAA",1,21.94,9.83,-0.93,0.14,2.26,1,0.01,">1 nonsynonymous","N4S Y21L",2
"lib1","SARS-CoV-2","ATCCGGAGTGACCTTG",7,86.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37K Y50M V77K A81K G117V F134I",6
"lib1","SARS-CoV-2","ATCCGGATTGATAATC",1,18.82,10.82,0.05,0.11,2.9,1.05,0,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","ATCCGGCAAAAAATAA",6,34.63,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","Y21I D90G F99S K128R F160T K199N",6
"lib1","SARS-CoV-2","ATCCGGCCAATTTCGG",21,352.91,9.71,-1.06,0.1,1.83,1.07,0,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","ATCCGGCCCAACAACT",4,59.16,10.36,-0.41,0.06,2.89,1.04,0,">1 nonsynonymous","T15R D97L N120G",3
"lib1","SARS-CoV-2","ATCCGGCCTATATCAT",11,80.26,10.64,-0.13,0.06,2.9,1.05,0,"1 nonsynonymous","T15A",1
"lib1","SARS-CoV-2","ATCCGGCGGGCAATAT",8,58.39,10.4,-0.36,0.05,2.9,1.03,0,">1 nonsynonymous","N1D L122T S129L P149L",4
"lib1","SARS-CoV-2","ATCCGGGGCATGTCTG",6,1.24,NA,NA,NA,NA,NA,NA,"stop","N13Y S19* K26V C61R G152N",5
"lib1","SARS-CoV-2","ATCCGGTATAACTCTA",4,61.51,9.97,-0.8,0.09,2.05,1,0,">1 nonsynonymous","T3L V32I G51L",3
"lib1","SARS-CoV-2","ATCCGGTTCACTAATA",1,14.14,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","T63L V103D",2
"lib1","SARS-CoV-2","ATCCGTAAAGACGGTT",3,24.15,9.08,-1.68,0.21,1.62,1.23,0.02,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","ATCCGTAACTAATCCG",1,7.42,10.22,-0.54,0.14,2.81,1,0.01,">1 nonsynonymous","V37I L38A",2
"lib1","SARS-CoV-2","ATCCGTAAGTAAGTAG",3,42.01,10.26,-0.51,0.05,2.8,1,0,">1 nonsynonymous","F44T T85A K128S",3
"lib1","SARS-CoV-2","ATCCGTAATTTAAACA",1,7.64,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N40I C49A V77M N92A A192V",5
"lib1","SARS-CoV-2","ATCCGTACCGAGACAG",9,37.77,7.85,-2.92,0.24,1.5,1.05,0.02,">1 nonsynonymous","S113G S129L Q144L",3
"lib1","SARS-CoV-2","ATCCGTATCGAGTATC",1,12.13,6.48,-4.28,0.29,1.5,1.05,0.01,">1 nonsynonymous","G86Q L125A T170Y",3
"lib1","SARS-CoV-2","ATCCGTCATAAACGAA",2,8.8,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N92K R136C",2
"lib1","SARS-CoV-2","ATCCGTCATTCTGTTA",2,46.16,10.56,-0.21,0.08,2.84,1.05,0,"1 nonsynonymous","N13G",1
"lib1","SARS-CoV-2","ATCCGTCCCAACCCGA",2,66.89,10.3,-0.47,0.03,2.92,1.02,0,">1 nonsynonymous","C6S C61R",2
"lib1","SARS-CoV-2","ATCCGTCTCAACATGT",5,116.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19L S36M R136V V173M",4
"lib1","SARS-CoV-2","ATCCGTGAAAGGGCGA",1,59.8,10.23,-0.53,0.06,2.87,1,0,">1 nonsynonymous","K114Y S129R S139H",3
"lib1","SARS-CoV-2","ATCCGTGACAGGGACA",1,25.56,10.4,-0.36,0.07,2.95,1.01,0,">1 nonsynonymous","D97N V103I L122R P149L",4
"lib1","SARS-CoV-2","ATCCGTGCAAATTAAA",1,5.5,6.88,-3.88,1.13,3,1.16,0.01,">1 nonsynonymous","Y50H R124C",2
"lib1","SARS-CoV-2","ATCCGTGCTCCAAGAC",2,93.5,10.58,-0.19,0.04,2.92,1.02,0,"1 nonsynonymous","I28V",1
"lib1","SARS-CoV-2","ATCCGTGGGATGTTAG",1,9.14,7.08,-3.69,0.72,1.5,1.15,0.05,">1 nonsynonymous","A42M A89K F167S V181I",4
"lib1","SARS-CoV-2","ATCCGTGTTACACTGC",1,32.52,10.08,-0.69,0.13,2.51,1,0.01,">1 nonsynonymous","C6I K56Q W106F N130K",4
"lib1","SARS-CoV-2","ATCCGTTAATCACCGC",2,19.68,9,-1.77,0.16,1.72,1.16,0.02,">1 nonsynonymous","R127T V153S",2
"lib1","SARS-CoV-2","ATCCTAAAACCCTAAC",2,34.49,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F70Y G86F K94R N130Y S139R Q168I S184E",7
"lib1","SARS-CoV-2","ATCCTAAAGCCTCCGG",1,3.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","ATCCTAACAGTCTGGC",6,35.31,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y93L Y123H P133I",3
"lib1","SARS-CoV-2","ATCCTAACGACCAAAA",5,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K Q84N K94M F167W",4
"lib1","SARS-CoV-2","ATCCTAACTATAGACT",13,56.1,6,-4.76,1.93,1.5,1.16,0.02,">1 nonsynonymous","V37S D90G I104R E154V V182R",5
"lib1","SARS-CoV-2","ATCCTAAGATGCAACT",5,124.3,10.76,-0.01,0.07,2.95,1.01,0,"1 nonsynonymous","D59K",1
"lib1","SARS-CoV-2","ATCCTAAGTGCACTGT",3,1.5,NA,NA,NA,NA,NA,NA,"stop","C49* K56L I88R Q144I H189L",5
"lib1","SARS-CoV-2","ATCCTAAGTTTATCCT",1,12.79,7.65,-3.11,0.25,1.64,1.17,0.03,">1 nonsynonymous","F12R S139N",2
"lib1","SARS-CoV-2","ATCCTAATAAACAAAA",7,64.2,10.57,-0.19,0.07,2.89,1.05,0,">1 nonsynonymous","K48L K114T",2
"lib1","SARS-CoV-2","ATCCTAATCCGCGGGA",3,9.37,6,-4.76,2,1.5,1.1,0.08,">1 nonsynonymous","C61L N92E P197T",3
"lib1","SARS-CoV-2","ATCCTAATGCAAGTTT",3,7.56,6,-4.76,1.99,1.5,1.19,0.04,">1 nonsynonymous","K94Q W106L",2
"lib1","SARS-CoV-2","ATCCTAATGCATATCA",6,30.59,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","L95A G101F",2
"lib1","SARS-CoV-2","ATCCTAATGCTTAATT",10,69.92,6.1,-4.67,0.62,1.5,1.14,0.01,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","ATCCTAATGTCCGTCT",7,44.85,6,-4.76,1.97,1.5,1.21,0.01,">1 nonsynonymous","A14P S36C D97E P169I",4
"lib1","SARS-CoV-2","ATCCTAATTGCCTTAA",1,8.68,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","W23T P96W T148V",3
"lib1","SARS-CoV-2","ATCCTAATTTAAAAAA",1,85.54,10.73,-0.03,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCTACAACACTTGA",3,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P W106S S113M",3
"lib1","SARS-CoV-2","ATCCTACACTGTTCAT",2,53.87,10.72,-0.04,0.07,2.87,1.09,0,"1 nonsynonymous","V173K",1
"lib1","SARS-CoV-2","ATCCTACAGAAAGGCT",1,5.86,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","T55C P82F V180E",3
"lib1","SARS-CoV-2","ATCCTACAGCTGATAA",4,94.12,10.6,-0.17,0.04,2.94,1.01,0,">1 nonsynonymous","I2R D59G K132T",3
"lib1","SARS-CoV-2","ATCCTACGAAGAACAA",2,13.91,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","P54I C61Y C150Y S184F",4
"lib1","SARS-CoV-2","ATCCTACGTTAATACG",2,0,NA,NA,NA,NA,NA,NA,"stop","N24*",1
"lib1","SARS-CoV-2","ATCCTACTACCTCGAG",2,5.27,9.93,-0.83,0.09,2.83,1.05,0,">1 nonsynonymous","P7A C61Y E141R",3
"lib1","SARS-CoV-2","ATCCTACTTGAACAAC",1,12.1,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","F44S Y50Q",2
"lib1","SARS-CoV-2","ATCCTAGAAGTCAATT",4,13.76,7.53,-3.24,0.48,1.7,1.21,0.08,">1 nonsynonymous","T3L I28L A81Q Y91R V115K",5
"lib1","SARS-CoV-2","ATCCTAGACTGAACTT",4,2.16,NA,NA,NA,NA,NA,NA,"stop","D90* S164Y",2
"lib1","SARS-CoV-2","ATCCTAGCAATGAATC",4,31.92,8.79,-1.97,0.13,2.64,1.15,0.01,">1 nonsynonymous","S41F D97T Y119L",3
"lib1","SARS-CoV-2","ATCCTAGCGAACGAGA",1,19.03,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y50V S113G Y119M",3
"lib1","SARS-CoV-2","ATCCTAGCTCTAAAGG",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97G V182R",2
"lib1","SARS-CoV-2","ATCCTAGGAGATTAGT",10,220.65,7.85,-2.91,0.09,1.73,1.12,0,">1 nonsynonymous","R27S S36G Y119R F126S",4
"lib1","SARS-CoV-2","ATCCTATAACTTAAAC",2,10.96,9.9,-0.86,0.27,1.67,1.13,0.05,">1 nonsynonymous","V52S E135S",2
"lib1","SARS-CoV-2","ATCCTATATGGATTGC",4,48.77,10.01,-0.76,0.1,2.37,1.03,0,">1 nonsynonymous","L60D Y91L K128N",3
"lib1","SARS-CoV-2","ATCCTATGAAGACCAA",1,11.86,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","Y39I D59L D90T D97N T140W",5
"lib1","SARS-CoV-2","ATCCTATGCCCGTTAC",1,57.13,10.21,-0.55,0.06,2.76,1.05,0,">1 nonsynonymous","N13T F44Y",2
"lib1","SARS-CoV-2","ATCCTATGGACTAGAT",2,37.66,10.84,0.08,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCTATGGGATTGGC",4,19.29,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A14I S45T D59A T100D G116V",5
"lib1","SARS-CoV-2","ATCCTATGGTCAAAAC",3,14.02,10.84,0.08,0.15,2.73,1.2,0.01,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","ATCCTATTGACTGTTT",1,23.51,8.68,-2.08,0.27,1.5,1.1,0.03,">1 nonsynonymous","F44Q Y91Q",2
"lib1","SARS-CoV-2","ATCCTCAAAAATCCAA",1,2.02,NA,NA,NA,NA,NA,NA,"stop","A105V G116*",2
"lib1","SARS-CoV-2","ATCCTCAACCTCATAT",2,73.77,8.81,-1.96,0.1,2.59,1.04,0,">1 nonsynonymous","T15Y N110L Y119S",3
"lib1","SARS-CoV-2","ATCCTCAACGAGTCTG",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M S41V N64T P96T Y121T",5
"lib1","SARS-CoV-2","ATCCTCAACTAATAAG",9,254.41,9.95,-0.81,0.06,2.73,1.04,0,">1 nonsynonymous","C6L A192E",2
"lib1","SARS-CoV-2","ATCCTCAATGAAATTG",3,45.92,8.59,-2.17,0.1,2.54,1.08,0,">1 nonsynonymous","V52W G174V K199S",3
"lib1","SARS-CoV-2","ATCCTCACTGAGCCGG",8,177.93,9.95,-0.81,0.06,2.7,1.06,0,">1 nonsynonymous","I28V K56S S147C",3
"lib1","SARS-CoV-2","ATCCTCATAGTAAAGC",3,20.93,10.78,0.01,0.09,2.85,1.09,0,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","ATCCTCATATGTCGTG",1,18,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T63L S113C Y123N",3
"lib1","SARS-CoV-2","ATCCTCCAACTTTCGA",6,69.83,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56Q L131G P161A G174W",4
"lib1","SARS-CoV-2","ATCCTCCACAAACACC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","L57*",1
"lib1","SARS-CoV-2","ATCCTCCGATATCTCA",3,17.04,7.86,-2.91,0.34,1.5,1,0.06,">1 nonsynonymous","D34T S113M",2
"lib1","SARS-CoV-2","ATCCTCCTTTAATGGG",3,16.07,9.66,-1.1,0.19,2.15,1.13,0.01,">1 nonsynonymous","K87S W106T N120E",3
"lib1","SARS-CoV-2","ATCCTCGAAACATAAG",2,2.79,NA,NA,NA,NA,NA,NA,"stop","S43N T55*",2
"lib1","SARS-CoV-2","ATCCTCGCTTCAAAAA",6,12.41,6,-4.76,2,3,1.25,0.03,">1 nonsynonymous","N4G A42L D68W Q84R",4
"lib1","SARS-CoV-2","ATCCTCGTTCTGAGAT",1,31.29,9.73,-1.03,0.12,2.12,1.06,0.01,">1 nonsynonymous","T63S A105I L122Q A145I",4
"lib1","SARS-CoV-2","ATCCTCTAAAGGGACC",3,12.33,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A33Q C49T N64Y V103Y",4
"lib1","SARS-CoV-2","ATCCTCTATCCAAAAT",3,24.6,6,-4.76,1.84,3,1.1,0,">1 nonsynonymous","F8P Y66L N92L S129I",4
"lib1","SARS-CoV-2","ATCCTCTATTGCATTC",9,18.3,6.16,-4.61,0.92,1.5,1.27,0.03,">1 nonsynonymous","K94L T140Y",2
"lib1","SARS-CoV-2","ATCCTCTCGGGACTTG",1,43.57,8.6,-2.16,0.16,1.5,1.1,0.02,">1 nonsynonymous","S19E Y178N",2
"lib1","SARS-CoV-2","ATCCTCTGACGAAAAT",2,38.09,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8T A14Y S41T S108L S129V S139H A192D",7
"lib1","SARS-CoV-2","ATCCTGAAAATTCCAC",2,37.52,10.82,0.06,0.07,2.83,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCCTGAAATACAAGT",2,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L V20I G166M T201E",4
"lib1","SARS-CoV-2","ATCCTGACAATTACAA",2,53.49,8.69,-2.08,0.1,2.75,1.13,0.01,">1 nonsynonymous","I28M Y143C",2
"lib1","SARS-CoV-2","ATCCTGACAATTAGCA",4,24.15,10.26,-0.51,0.12,2.54,1.05,0.01,">1 nonsynonymous","N24E K48Y T140I",3
"lib1","SARS-CoV-2","ATCCTGACAGACACCC",7,19.24,6.13,-4.64,1.33,1.5,1.18,0.06,">1 nonsynonymous","S45G D59V A81Y D97S P161Q",5
"lib1","SARS-CoV-2","ATCCTGACCAAATACT",3,5.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34M S41L T63Y T85D",4
"lib1","SARS-CoV-2","ATCCTGACTACAAACA",10,102.62,7.11,-3.65,0.26,1.5,1.14,0.01,">1 nonsynonymous","N107K L131T",2
"lib1","SARS-CoV-2","ATCCTGACTATTCGTT",6,153.63,10.6,-0.16,0.04,2.87,1.08,0,">1 nonsynonymous","S41N I142L",2
"lib1","SARS-CoV-2","ATCCTGAGCCAGACCT",9,150.99,8.31,-2.46,0.09,2.4,1.1,0,"1 nonsynonymous","S113E",1
"lib1","SARS-CoV-2","ATCCTGAGCCAGCTAA",4,10.79,6.59,-4.18,1.16,1.78,1.43,0.03,">1 nonsynonymous","K94N I104T P161R P177T",4
"lib1","SARS-CoV-2","ATCCTGATAAATATCT",2,16.29,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","Y35A N64A G74T N109P K132A G196R",6
"lib1","SARS-CoV-2","ATCCTGATCGCTTAAC",7,82.64,10.67,-0.09,0.07,2.9,1.07,0,">1 nonsynonymous","R16N T85L P197T",3
"lib1","SARS-CoV-2","ATCCTGCATCTAATTG",8,70.33,10.8,0.04,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCTGCCAGACACAT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","Y121T K199*",2
"lib1","SARS-CoV-2","ATCCTGGTGTTCTCTT",4,67.64,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38S F44D A81P A190E",4
"lib1","SARS-CoV-2","ATCCTGTATAAACGCA",8,86.65,7.29,-3.47,0.11,1.5,1.13,0,">1 nonsynonymous","R127E Y143F",2
"lib1","SARS-CoV-2","ATCCTGTCAAATATTG",19,112.15,6.95,-3.82,0.22,1.5,1.19,0.01,">1 nonsynonymous","N1V P133F Q176K",3
"lib1","SARS-CoV-2","ATCCTGTGGGCCGTAA",2,34.9,8.54,-2.22,0.34,1.5,1.08,0.06,">1 nonsynonymous","G9P D90N W106S Q163L",4
"lib1","SARS-CoV-2","ATCCTTAAAATACACA",3,16.33,10.72,-0.04,0.07,2.92,1.07,0,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","ATCCTTAAAGAATTGC",2,11.22,8.54,-2.23,0.16,1.52,1.09,0.01,"1 nonsynonymous","V77W",1
"lib1","SARS-CoV-2","ATCCTTAACACTCCCA",2,8.08,9.35,-1.42,0.37,2.24,1.24,0.07,">1 nonsynonymous","C6G A14I V32T A42S G155A",5
"lib1","SARS-CoV-2","ATCCTTACATATTTCA",1,9.9,9.68,-1.08,0.31,2.28,1.15,0.02,">1 nonsynonymous","S19M A42S",2
"lib1","SARS-CoV-2","ATCCTTACGGCTGCCA",1,25.07,9.32,-1.44,0.12,2.71,1.19,0.01,">1 nonsynonymous","C61N L125W G155N",3
"lib1","SARS-CoV-2","ATCCTTAGATCTTATA",3,32.8,10.55,-0.22,0.09,2.8,1.06,0,">1 nonsynonymous","S41W K128L",2
"lib1","SARS-CoV-2","ATCCTTAGCATCAAAG",2,65.68,10.6,-0.17,0.05,2.93,1.01,0,"1 nonsynonymous","F62N",1
"lib1","SARS-CoV-2","ATCCTTAGGTGATATT",1,38.98,10.84,0.07,0.07,2.93,1.06,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","ATCCTTATAAACTGGG",1,9.97,6.44,-4.32,1.09,1.5,1.15,0.04,">1 nonsynonymous","N1S V11F K56M S129F Q144I G155M T201P",7
"lib1","SARS-CoV-2","ATCCTTATATTCTCAC",6,89.56,6.14,-4.62,0.75,1.5,1.22,0.02,">1 nonsynonymous","V77Y G117P I142K",3
"lib1","SARS-CoV-2","ATCCTTATCATACGAT",6,45.86,6.29,-4.47,0.83,1.5,1.11,0.05,">1 nonsynonymous","V77H Y123C I142C",3
"lib1","SARS-CoV-2","ATCCTTATCTCAAAAT",1,0.13,NA,NA,NA,NA,NA,NA,"stop","S45C T100* R127G E135V T170V",5
"lib1","SARS-CoV-2","ATCCTTATTAGTTTAT",10,84.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5V F44K D75P G101E F167T",5
"lib1","SARS-CoV-2","ATCCTTATTTCCTCCA",1,21.08,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","I72N G83S N92I Y119R",4
"lib1","SARS-CoV-2","ATCCTTCAATGACTAT",3,5.48,NA,NA,NA,NA,NA,0.44,"1 nonsynonymous","C102K",1
"lib1","SARS-CoV-2","ATCCTTCACTAAATTG",7,68.49,6.6,-4.16,0.45,1.5,1.23,0.02,">1 nonsynonymous","R25G P54T",2
"lib1","SARS-CoV-2","ATCCTTCCCCACCGCA",3,44.49,6.54,-4.23,0.51,1.5,1.15,0.03,">1 nonsynonymous","L57V A89K S113T",3
"lib1","SARS-CoV-2","ATCCTTCCGCTTCAGC",1,13.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19M V37I R73Q L131E",4
"lib1","SARS-CoV-2","ATCCTTCGATCAACAA",1,21.11,10.64,-0.12,0.1,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCTTCGCAATTGAT",7,92.73,10.72,-0.05,0.05,2.86,1.1,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","ATCCTTCTACTATAAA",9,20.78,9.66,-1.1,0.05,2.89,1.05,0,">1 nonsynonymous","V32T N118F A190E",3
"lib1","SARS-CoV-2","ATCCTTCTCAATTTCT",2,16.05,9.33,-1.44,0.36,1.5,1,0.07,">1 nonsynonymous","C61A F99T",2
"lib1","SARS-CoV-2","ATCCTTCTGAATAATC",5,126.97,10.06,-0.7,0.07,2.91,1.02,0,">1 nonsynonymous","Y143L T148I K198N",3
"lib1","SARS-CoV-2","ATCCTTGACCATGGCA",8,122.98,6.23,-4.53,0.69,1.5,1.13,0.02,">1 nonsynonymous","Y21E I88E",2
"lib1","SARS-CoV-2","ATCCTTGGATCACTAT",2,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P C61L I80G I104N L122Q R136I",6
"lib1","SARS-CoV-2","ATCCTTGTCATCTAAA",2,7.81,10.52,-0.25,0.13,2.9,1,0.01,">1 nonsynonymous","Y91M T201A",2
"lib1","SARS-CoV-2","ATCCTTTCGACTCCTA",7,64.91,6.35,-4.42,0.47,1.5,1.19,0.01,">1 nonsynonymous","L5F S29H G83N A105M Y165H",5
"lib1","SARS-CoV-2","ATCCTTTGTACGCTAT",2,16.75,10.9,0.14,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCCTTTTAGAAAGAG",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G155S V180F",2
"lib1","SARS-CoV-2","ATCCTTTTATAAATAG",1,13.19,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F44H E76A Q176I",3
"lib1","SARS-CoV-2","ATCGAAAATGAATTAT",6,53.82,10.75,-0.02,0.05,2.94,1.02,0,">1 nonsynonymous","I138L N151L",2
"lib1","SARS-CoV-2","ATCGAAACGCTTCTGC",3,15.73,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K26L F70C",2
"lib1","SARS-CoV-2","ATCGAAACGTAATAAA",2,38.49,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L60V Q144D G172V",3
"lib1","SARS-CoV-2","ATCGAAACTTAGCAGA",2,8.55,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","L5Q S19L N92L G152C F167R T201E",6
"lib1","SARS-CoV-2","ATCGAAAGACAATTCT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","F99V I142*",2
"lib1","SARS-CoV-2","ATCGAAAGTGAAAACG",2,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47M D97Y F167C V182S",4
"lib1","SARS-CoV-2","ATCGAAAGTGAGCCCC",6,20.08,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N13I G86C",2
"lib1","SARS-CoV-2","ATCGAAATACAACAAG",6,16.1,6,-4.76,2,3,1.07,0,">1 nonsynonymous","S53A V71K E141G N157S",4
"lib1","SARS-CoV-2","ATCGAAATATGATAGT",12,107.2,6,-4.76,0.87,1.5,1.22,0.01,">1 nonsynonymous","T3Q T15E S36T T46F S53V G86E Q176T T201D",8
"lib1","SARS-CoV-2","ATCGAAATGTGTTCAT",5,57.51,10.12,-0.64,0.06,2.89,1.02,0,">1 nonsynonymous","G152K G166A",2
"lib1","SARS-CoV-2","ATCGAACAAAACATTT",1,21.52,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49N Q144G P197Q",3
"lib1","SARS-CoV-2","ATCGAACAATGCACTC",6,27.44,7.11,-3.65,0.35,1.5,1.1,0.02,">1 nonsynonymous","C31K K94F F99R L122N K132Y",5
"lib1","SARS-CoV-2","ATCGAACAGATTTGGA",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40R A89H S147P",3
"lib1","SARS-CoV-2","ATCGAACCATATCTGT",3,21.16,10.46,-0.3,0.07,2.84,1.14,0,">1 nonsynonymous","T55R K128L",2
"lib1","SARS-CoV-2","ATCGAACCCGGTCATA",4,72.15,10.85,0.09,0.08,2.9,1.06,0,">1 nonsynonymous","L5W V37F",2
"lib1","SARS-CoV-2","ATCGAACCTACACCTA",2,6.83,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","S45N V77N T85S N118R",4
"lib1","SARS-CoV-2","ATCGAACGCCTACTAG",2,1.14,NA,NA,NA,NA,NA,NA,"stop","A42T V52D V65M K94M I104C L122* T148H G155L",8
"lib1","SARS-CoV-2","ATCGAACTTAGGGTAG",2,34.19,10.77,0.01,0.1,2.84,1.07,0,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","ATCGAACTTATAATCA",2,26.85,10.9,0.13,0.06,2.93,1.02,0,">1 nonsynonymous","K56D T140R",2
"lib1","SARS-CoV-2","ATCGAACTTGGCAAGT",2,15.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A N64P V77L P82T C158V F167G T201S",7
"lib1","SARS-CoV-2","ATCGAAGAAAGCCTCA",10,135.09,9.88,-0.89,0.06,2.77,1.04,0,">1 nonsynonymous","C6G A42G K128L",3
"lib1","SARS-CoV-2","ATCGAAGAATAAGTCA",1,35.33,8.31,-2.45,0.17,1.93,1.18,0.01,">1 nonsynonymous","T3G E10S A89T G116N T170N",5
"lib1","SARS-CoV-2","ATCGAAGCAAAGTGCC",6,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q V52E A89H",3
"lib1","SARS-CoV-2","ATCGAAGCAAATAAAT",1,12.45,7.98,-2.78,0.41,1.87,1.24,0.04,">1 nonsynonymous","N1W P149L Q168K E186D",4
"lib1","SARS-CoV-2","ATCGAAGCAATCCGTA",12,216.46,10.67,-0.09,0.03,2.95,1.03,0,">1 nonsynonymous","V37R D98T",2
"lib1","SARS-CoV-2","ATCGAAGGAAAATGTT",9,46.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T15S L95R P161S",3
"lib1","SARS-CoV-2","ATCGAAGGAAGGACAG",6,157.62,10.77,0.01,0.05,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCGAAGTCAACAGTG",1,78.71,10.44,-0.32,0.05,2.77,1.08,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","ATCGAATAAGTGATAA",4,0.06,NA,NA,NA,NA,NA,NA,"stop","N4L S41T A81L G152* Y175N",5
"lib1","SARS-CoV-2","ATCGAATCCATTTCTA",8,3.72,NA,NA,NA,NA,NA,NA,"stop","A81* K128L",2
"lib1","SARS-CoV-2","ATCGAATGAATTCCAG",3,6,9.86,-0.9,0.08,2.84,1.05,0,">1 nonsynonymous","G83K N109D",2
"lib1","SARS-CoV-2","ATCGAATGCAACAACA",21,107.12,6.13,-4.63,0.98,1.5,1.21,0.03,">1 nonsynonymous","T3D R179G",2
"lib1","SARS-CoV-2","ATCGAATGGGTTGGAA",2,54.75,10.55,-0.21,0.07,2.82,1.08,0,">1 nonsynonymous","S41N Y121L",2
"lib1","SARS-CoV-2","ATCGAATTCATTGAAT",2,8.64,NA,NA,NA,NA,NA,NA,"stop","A42C P54* N118S",3
"lib1","SARS-CoV-2","ATCGACAAAATATGTT",3,29,10.74,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCGACAAAATATTCC",7,214.71,8.72,-2.04,0.09,2.93,1.06,0,">1 nonsynonymous","K87Q Y119F",2
"lib1","SARS-CoV-2","ATCGACAAACGGGCTG",7,59.09,9.05,-1.72,0.13,1.88,1.1,0.01,"1 nonsynonymous","S19Y",1
"lib1","SARS-CoV-2","ATCGACAACGATTTAA",4,86.39,7.32,-3.45,0.18,1.82,1.12,0.01,">1 nonsynonymous","S19D Y175S",2
"lib1","SARS-CoV-2","ATCGACAAGCGTTAAA",2,13.06,6,-4.76,1.33,3,1.05,0,">1 nonsynonymous","Y50S F99T N120A",3
"lib1","SARS-CoV-2","ATCGACAATACTAGGA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L A33R D112R V153N",4
"lib1","SARS-CoV-2","ATCGACACAAAAGAAT",1,13.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6I L38D F126R S164F",4
"lib1","SARS-CoV-2","ATCGACACAAAGCCTA",6,73.55,10.91,0.15,0.06,2.96,1.02,0,">1 nonsynonymous","I104F P149N",2
"lib1","SARS-CoV-2","ATCGACACAAATAATG",4,94.01,10.6,-0.17,0.04,2.93,1.02,0,">1 nonsynonymous","A42E N64L I138N",3
"lib1","SARS-CoV-2","ATCGACACCAGAGACA",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T R127N",2
"lib1","SARS-CoV-2","ATCGACACGCATATAG",9,109.25,10.77,0.01,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCGACACTTCACAAT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35L A42L I72V Q168*",4
"lib1","SARS-CoV-2","ATCGACAGAAGCTCTG",6,0.94,NA,NA,NA,NA,NA,NA,"stop","F12M Y39*",2
"lib1","SARS-CoV-2","ATCGACATAATAGATG",24,185,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R73T P96V P161S F167Q",4
"lib1","SARS-CoV-2","ATCGACCAGCACACGA",4,32.74,10.71,-0.05,0.08,2.9,1.07,0,"1 nonsynonymous","P197Y",1
"lib1","SARS-CoV-2","ATCGACCAGCAGAGTT",4,12.88,6,-4.76,1.47,2.34,1.27,0.01,">1 nonsynonymous","A18R F62S A89Y D137V",4
"lib1","SARS-CoV-2","ATCGACCATAGGATTT",5,0,NA,NA,NA,NA,NA,NA,"stop","C6N W23T L60* P177Y",4
"lib1","SARS-CoV-2","ATCGACCATGCATGTC",7,35.83,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","Y143P P149M",2
"lib1","SARS-CoV-2","ATCGACCTAGAAATTT",4,67.72,10.05,-0.71,0.1,2.44,1.04,0,">1 nonsynonymous","S41G Y91F R136I",3
"lib1","SARS-CoV-2","ATCGACCTATGCTTAA",2,136.97,10.28,-0.48,0.07,2.83,1.02,0,">1 nonsynonymous","A33G L131M",2
"lib1","SARS-CoV-2","ATCGACCTCCTGCCTT",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S S139P",2
"lib1","SARS-CoV-2","ATCGACCTTAACCCGA",3,37.37,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A22G T85P F99Y N118T",4
"lib1","SARS-CoV-2","ATCGACCTTATATGAC",2,31.48,6.76,-4.01,0.74,1.5,1.21,0.06,">1 nonsynonymous","N107S P177L",2
"lib1","SARS-CoV-2","ATCGACGATCTAACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","ATCGACGTTGAGGACT",3,103.65,10.57,-0.19,0.07,2.8,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCGACTACAAAAGCA",2,51.48,6.24,-4.52,0.43,1.5,1.09,0.01,">1 nonsynonymous","R25S Y123T F134Y F160G L188Y",5
"lib1","SARS-CoV-2","ATCGACTACCTAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44I P149*",2
"lib1","SARS-CoV-2","ATCGACTATTATTCCG",1,23.93,10.49,-0.27,0.1,2.86,1.1,0,"1 nonsynonymous","P197W",1
"lib1","SARS-CoV-2","ATCGACTCATTAGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L95E T201*",2
"lib1","SARS-CoV-2","ATCGACTCGTAGTCGC",6,22.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99N E141Y",2
"lib1","SARS-CoV-2","ATCGACTGGTATATGC",2,36.3,10.5,-0.27,0.06,2.92,1.01,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","ATCGACTTAACAAACA",1,27.37,10.69,-0.07,0.09,2.85,1.1,0.01,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","ATCGACTTTAAAATCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6K A42T D90T R124H R179* T201I",6
"lib1","SARS-CoV-2","ATCGACTTTGATAAAA",1,15.37,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","W23M C61V Q144S F156S K199T",5
"lib1","SARS-CoV-2","ATCGAGAAACTATATG",1,28.44,10.85,0.08,0.08,2.91,1.07,0,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","ATCGAGAACAATAAGT",12,107.33,6.29,-4.48,0.31,1.5,1.13,0.01,">1 nonsynonymous","V11P C31S G83W K94N V115M",5
"lib1","SARS-CoV-2","ATCGAGAATATAAAAT",4,81.31,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S41G D90V C102E L125S A145F G155W",6
"lib1","SARS-CoV-2","ATCGAGACGAACACAG",3,24.46,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V65D A105P D112E F167V",4
"lib1","SARS-CoV-2","ATCGAGACGAGTGCTG",2,9.07,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5D R16G T55Y F70V F99T V103A",6
"lib1","SARS-CoV-2","ATCGAGAGTATATACG",3,68.98,10.67,-0.09,0.03,2.92,1.04,0,"1 nonsynonymous","D98R",1
"lib1","SARS-CoV-2","ATCGAGATAATCAAGT",1,11.33,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N92K E141L",2
"lib1","SARS-CoV-2","ATCGAGATACAAACTG",3,8.7,10.45,-0.31,0.29,2.68,1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ATCGAGATACCAACCA",8,61.88,9.76,-1,0.15,2.1,1.1,0.01,">1 nonsynonymous","A81M T85W",2
"lib1","SARS-CoV-2","ATCGAGATAGACCTTA",3,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36C Y121E Y165T A190T",4
"lib1","SARS-CoV-2","ATCGAGATATAATGCG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F99I",2
"lib1","SARS-CoV-2","ATCGAGATATTTTACT",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L I72K",2
"lib1","SARS-CoV-2","ATCGAGATGAAAGATG",6,86.02,8.75,-2.01,0.09,2.68,1.05,0,">1 nonsynonymous","S29F Y119F I138P",3
"lib1","SARS-CoV-2","ATCGAGATGGTATGGC",3,72.05,9.75,-1.02,0.09,2.35,1.11,0,">1 nonsynonymous","L5S E135G Y178V",3
"lib1","SARS-CoV-2","ATCGAGCGGCCAAGAC",5,0,NA,NA,NA,NA,NA,NA,"stop","K26R S113L R136* N157R",4
"lib1","SARS-CoV-2","ATCGAGCGGTGCCAAA",4,102.1,10.47,-0.29,0.03,2.93,1.03,0,">1 nonsynonymous","F12L T148Q",2
"lib1","SARS-CoV-2","ATCGAGGAAACTTAGT",2,15.06,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35H L57G K94L I104S",4
"lib1","SARS-CoV-2","ATCGAGGAATCTGCAG",3,240.14,9.08,-1.68,0.06,2.88,1.07,0,"1 nonsynonymous","F156D",1
"lib1","SARS-CoV-2","ATCGAGGCCAAGTTCA",4,52.44,6.01,-4.76,0.8,1.5,1.17,0.01,">1 nonsynonymous","C61H Y93R N107S Y123F S139A",5
"lib1","SARS-CoV-2","ATCGAGGGTAACACAG",3,96.55,9.06,-1.7,0.05,2.82,1.12,0,">1 nonsynonymous","D97E S113A L122T G166K",4
"lib1","SARS-CoV-2","ATCGAGGTAACTCGAT",2,2.91,NA,NA,NA,NA,NA,NA,"stop","S36V L187I T201*",3
"lib1","SARS-CoV-2","ATCGAGGTTAACCATA",7,31.28,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12T A22K D98I P149A A190H K199L",6
"lib1","SARS-CoV-2","ATCGAGGTTATGACAA",1,68.84,10.83,0.07,0.09,2.94,1.03,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","ATCGAGTAATTATGAA",1,17.95,10.83,0.06,0.07,2.98,1,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","ATCGAGTCTTTAGAAG",6,38.61,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","L95R N120Y",2
"lib1","SARS-CoV-2","ATCGAGTTTATTCACA",4,0.95,NA,NA,NA,NA,NA,NA,"stop","N1K R78E T85D D90V L131* L188I",6
"lib1","SARS-CoV-2","ATCGATAACTCACACC",4,28.07,8.29,-2.48,0.22,1.5,1,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","ATCGATAAGAAAAACA",2,12.46,6,-4.76,1.57,3,1.14,0,">1 nonsynonymous","V37R S113K S139I",3
"lib1","SARS-CoV-2","ATCGATACATTCGAAC",7,141.84,10.71,-0.06,0.03,2.93,1.02,0,">1 nonsynonymous","D90S N120D",2
"lib1","SARS-CoV-2","ATCGATACGTACCTCG",6,22.52,NA,NA,NA,NA,NA,NA,"stop","A33S F44* P197V T201C",4
"lib1","SARS-CoV-2","ATCGATAGACAAAGGT",2,11.96,10.2,-0.56,0.07,2.88,1,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","ATCGATAGATGATCAT",5,140.02,10.45,-0.32,0.06,2.93,1.04,0,">1 nonsynonymous","T55M K87C",2
"lib1","SARS-CoV-2","ATCGATATAACAAAAG",7,166.39,9.66,-1.1,0.1,1.99,1.07,0,">1 nonsynonymous","C31R F62R K199C",3
"lib1","SARS-CoV-2","ATCGATATATTATTAA",2,49.66,10.27,-0.5,0.09,2.68,1.07,0,">1 nonsynonymous","A81W S184C",2
"lib1","SARS-CoV-2","ATCGATATGGGAAATG",9,104.02,6.11,-4.65,1.1,1.5,1.3,0.03,">1 nonsynonymous","K56V C61S A105L",3
"lib1","SARS-CoV-2","ATCGATATTCGCAAGT",7,38.04,10.14,-0.62,0.08,2.64,1.07,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","ATCGATATTTCTGAAC",6,85.57,9.8,-0.97,0.08,1.92,1.07,0,">1 nonsynonymous","N4I E10F T201Y",3
"lib1","SARS-CoV-2","ATCGATATTTTACAAG",1,1.72,NA,NA,NA,NA,NA,NA,"stop","S129F Q144*",2
"lib1","SARS-CoV-2","ATCGATATTTTTGCAA",1,29.77,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R27L Y35E W106K Y143S",4
"lib1","SARS-CoV-2","ATCGATCCATTGGCTG",2,9.21,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G51I R127H R136C",3
"lib1","SARS-CoV-2","ATCGATGAATTGCGAT",2,15.28,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","P82W F134S",2
"lib1","SARS-CoV-2","ATCGATGAGCTGCCAA",2,52.28,8.51,-2.25,0.09,2.28,1.08,0,">1 nonsynonymous","G117P L183F",2
"lib1","SARS-CoV-2","ATCGATGCTATTTAAC",5,26.09,10.01,-0.75,0.12,2.39,1.02,0.01,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","ATCGATGTCGGTACTT",4,40.42,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F12C Q84L I88L R179V",4
"lib1","SARS-CoV-2","ATCGATTAAAGTCCAG",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N R124H",2
"lib1","SARS-CoV-2","ATCGATTACAATTTTC",1,10.48,6,-4.76,2,1.5,1.07,0.05,">1 nonsynonymous","A22Q Y50G C61S G152T",4
"lib1","SARS-CoV-2","ATCGATTAGTATTAAT",1,33.16,10.77,0.01,0.07,2.94,1.04,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","ATCGATTCAGCGTGTT",8,55.78,10.36,-0.4,0.05,2.91,1.02,0,">1 nonsynonymous","L5A F156V",2
"lib1","SARS-CoV-2","ATCGCAAACCGGCACA",8,62.42,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7Q D34A Y66W N118M P161F T170S",6
"lib1","SARS-CoV-2","ATCGCAAACTAAATAC",1,16.31,10.66,-0.1,0.09,2.84,1.07,0.01,">1 nonsynonymous","K56F S200V",2
"lib1","SARS-CoV-2","ATCGCAAACTACGTTA",9,3.39,NA,NA,NA,NA,NA,NA,"stop","L60A S184* F185A",3
"lib1","SARS-CoV-2","ATCGCAAACTCACCCA",8,102.78,9.85,-0.92,0.13,2.16,1.05,0.01,">1 nonsynonymous","L57S N151V",2
"lib1","SARS-CoV-2","ATCGCAACCGGAAATT",8,5.41,NA,NA,NA,NA,NA,NA,"stop","F12M Y50* F70N W106S",4
"lib1","SARS-CoV-2","ATCGCAACCGGCTAGC",1,5.53,10.75,-0.01,0.1,2.84,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCGCAAGTACACAAT",4,1.12,NA,NA,NA,NA,NA,NA,"stop","N4L A14C V32L V77T P96A V173*",6
"lib1","SARS-CoV-2","ATCGCAATAAGTGGAA",1,35.31,7.89,-2.87,0.26,1.5,1.02,0.03,">1 nonsynonymous","P54D S113A R127S F134P",4
"lib1","SARS-CoV-2","ATCGCAATAATTAAAG",2,7.02,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S69W Y119L S139L G172Q",4
"lib1","SARS-CoV-2","ATCGCACACTGGAGAG",3,38.14,7.07,-3.7,0.61,1.5,1,0.08,">1 nonsynonymous","C6T G51I D90S A145E T148D F160S Y165A",7
"lib1","SARS-CoV-2","ATCGCACCAACTGCGC",2,41,10.15,-0.61,0.12,2.7,1.03,0.01,">1 nonsynonymous","A14N T55P A190V",3
"lib1","SARS-CoV-2","ATCGCACCACTCGATA",5,87.47,10.63,-0.13,0.05,2.86,1.07,0,">1 nonsynonymous","R27Y Q144N",2
"lib1","SARS-CoV-2","ATCGCACCTTTTAAGA",1,5.66,6.59,-4.18,0.46,1.78,1.23,0.02,">1 nonsynonymous","L5F C49E",2
"lib1","SARS-CoV-2","ATCGCACGGCGACAAG",9,170.37,10.39,-0.37,0.03,2.88,1.04,0,"1 nonsynonymous","G152V",1
"lib1","SARS-CoV-2","ATCGCACGGGTATCAG",7,105.72,10.71,-0.05,0.05,2.92,1.04,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","ATCGCACGTGCAGAAT",9,0.18,NA,NA,NA,NA,NA,NA,"stop","C49V D68L P96R S184*",4
"lib1","SARS-CoV-2","ATCGCACTAACTCACG",3,48.84,8.71,-2.06,0.11,2.47,1.07,0.01,">1 nonsynonymous","P96A Y119L",2
"lib1","SARS-CoV-2","ATCGCACTCATAAACC",2,7.93,6,-4.76,2,3,1.01,0,">1 nonsynonymous","V11S F47I L60C V65I C150I",5
"lib1","SARS-CoV-2","ATCGCACTTATATACT",12,2.17,NA,NA,NA,NA,NA,NA,"stop","R27E D59S Y93F Y119N K132*",5
"lib1","SARS-CoV-2","ATCGCACTTTATAGAC",2,7.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62R F99I S147T",3
"lib1","SARS-CoV-2","ATCGCAGAATAGTCAC",8,2.39,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib1","SARS-CoV-2","ATCGCAGAGAAAACGT",3,7.28,6.23,-4.54,0.94,1.5,1.08,0.07,">1 nonsynonymous","E10D D34R F62R D98P N107D",5
"lib1","SARS-CoV-2","ATCGCAGCCCTATAGG",2,27.57,6.41,-4.35,0.67,1.5,1.11,0.04,">1 nonsynonymous","Y93E G116Q",2
"lib1","SARS-CoV-2","ATCGCAGGAATTAATC",4,14.86,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","R16M K26L G116V S184P A192E P197R",6
"lib1","SARS-CoV-2","ATCGCAGGATTCAACA",9,74.13,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R25C D68W Y91F N109F K114D",5
"lib1","SARS-CoV-2","ATCGCAGTCAAAATAT",1,75.14,9.27,-1.49,0.11,1.53,1.09,0.01,">1 nonsynonymous","L5M A105L",2
"lib1","SARS-CoV-2","ATCGCAGTCCGACCTA",5,43.01,10.61,-0.15,0.05,2.94,1,0,"1 nonsynonymous","F44K",1
"lib1","SARS-CoV-2","ATCGCAGTGTACCGAT",4,30.94,10.82,0.05,0.08,2.9,1.06,0,"1 nonsynonymous","K198Y",1
"lib1","SARS-CoV-2","ATCGCATACAATAAAA",7,173.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y143R Q176L",2
"lib1","SARS-CoV-2","ATCGCATACTTTCAAC",1,24.13,6.63,-4.14,0.62,1.5,1.1,0.06,">1 nonsynonymous","C49D S129I E135S",3
"lib1","SARS-CoV-2","ATCGCATATGATTCTC",2,44.8,10.05,-0.71,0.12,2.05,1.05,0,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","ATCGCATCCTGGCAAT",1,56.6,10,-0.77,0.06,2.39,1.01,0,">1 nonsynonymous","R27K F47Y K132P",3
"lib1","SARS-CoV-2","ATCGCATTGAAGTAAA",7,78.03,10.7,-0.07,0.05,2.98,1,0,"1 nonsynonymous","N64W",1
"lib1","SARS-CoV-2","ATCGCCACTGTGGCCG",5,28.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10P G74T D97L H189C",4
"lib1","SARS-CoV-2","ATCGCCCAAAGCTCCA",3,49.64,9.47,-1.29,0.25,1.5,1.02,0.03,">1 nonsynonymous","Y39R T46L Y50S",3
"lib1","SARS-CoV-2","ATCGCCCACTTACTTA",2,20.99,10.13,-0.64,0.14,2.59,1.28,0.01,">1 nonsynonymous","R16I P149F",2
"lib1","SARS-CoV-2","ATCGCCCATCGCTGAC",10,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q R78W P96E",3
"lib1","SARS-CoV-2","ATCGCCCCCATAGAGC",1,29.21,10.48,-0.29,0.09,2.97,1,0,"1 nonsynonymous","N30Y",1
"lib1","SARS-CoV-2","ATCGCCCTTCTGACAT",3,41.11,9.95,-0.81,0.07,2.82,1.05,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","ATCGCCGAAACGGCGG",2,32.69,10.19,-0.58,0.16,2.19,1.05,0.01,">1 nonsynonymous","K48I Y66R",2
"lib1","SARS-CoV-2","ATCGCCGCTGATCCGA",6,144.45,8.76,-2,0.08,2.88,1.09,0,">1 nonsynonymous","S41W T46Q L125R L187I",4
"lib1","SARS-CoV-2","ATCGCCTCCTATACGT",4,27.76,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","V71R A89C G117E E141S T170Y",5
"lib1","SARS-CoV-2","ATCGCGAAAACATTGA",10,140.59,8.54,-2.22,0.08,2.51,1.1,0,">1 nonsynonymous","F12L A42P K56L F126Y",4
"lib1","SARS-CoV-2","ATCGCGACAGGAGCAG",4,58.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9R R25Y G146I F167K",4
"lib1","SARS-CoV-2","ATCGCGACCAATAGTT",1,17.36,6.44,-4.32,0.55,1.5,1.13,0.03,">1 nonsynonymous","S41I V52T L131R",3
"lib1","SARS-CoV-2","ATCGCGATGAGAGTTT",3,28.45,9.96,-0.8,0.1,2.37,1.07,0.01,"1 nonsynonymous","N24W",1
"lib1","SARS-CoV-2","ATCGCGATGGCCAGAA",2,16.33,10.85,0.09,0.09,3,1,0,">1 nonsynonymous","S29H V37Y",2
"lib1","SARS-CoV-2","ATCGCGCAGCGTTTAA",4,29.26,10.66,-0.1,0.03,2.97,1,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","ATCGCGCGAACCAAAG",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y Y121S",2
"lib1","SARS-CoV-2","ATCGCGCGCTTCTGCA",1,0.98,NA,NA,NA,NA,NA,NA,"stop","F12S Y39* S184T T201W",4
"lib1","SARS-CoV-2","ATCGCGGCTGATTTGG",2,19.04,10.64,-0.13,0.12,2.77,1.03,0.01,">1 nonsynonymous","V37D F62N L122G P149S",4
"lib1","SARS-CoV-2","ATCGCGGTCATTTATA",10,4.87,NA,NA,NA,NA,NA,NA,"stop","I2L V77F P96S T170C Y175*",5
"lib1","SARS-CoV-2","ATCGCGGTTTTAAATT",3,36.13,10.08,-0.69,0.11,2.07,1,0,">1 nonsynonymous","R16W V77R",2
"lib1","SARS-CoV-2","ATCGCGTCCCAAGCCA",19,337.31,9.81,-0.95,0.07,2.61,1.05,0,">1 nonsynonymous","V37S T55Q V173N Y178L A192T",5
"lib1","SARS-CoV-2","ATCGCGTGAAAACACC",3,31.33,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C31L P82Y Y91P G116L K128N N171H",6
"lib1","SARS-CoV-2","ATCGCGTGGAACAGGA",14,147.41,10.49,-0.27,0.04,2.93,1,0,"1 nonsynonymous","F44E",1
"lib1","SARS-CoV-2","ATCGCTAATAAGTTAT",2,17.85,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V103E P133T",2
"lib1","SARS-CoV-2","ATCGCTAATGATACGT",2,22.46,10.17,-0.59,0.08,2.76,1,0,">1 nonsynonymous","A18E V37D A105T",3
"lib1","SARS-CoV-2","ATCGCTAGAGCCGTTA",7,74.49,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y66S G86V G116S Q144A",4
"lib1","SARS-CoV-2","ATCGCTAGTAATATCT",5,34.44,6.49,-4.27,0.74,1.5,1.25,0.06,">1 nonsynonymous","S19V L60R F160R",3
"lib1","SARS-CoV-2","ATCGCTATAAATAACC",2,17.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21V D112L",2
"lib1","SARS-CoV-2","ATCGCTATCCCCCCCT",8,35.4,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","T63D G86R D98Y",3
"lib1","SARS-CoV-2","ATCGCTATTCGTCTGT",7,39.66,6,-4.76,2,1.5,1.18,0.04,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","ATCGCTCAATTATAGG",3,28.79,6,-4.76,1.59,3,1.13,0,">1 nonsynonymous","V71E G174V",2
"lib1","SARS-CoV-2","ATCGCTCCCCGTTAAG",9,197.32,9.92,-0.84,0.07,2.18,1.05,0,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","ATCGCTCTCTCCTTAT",6,81.38,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I88F N120M",2
"lib1","SARS-CoV-2","ATCGCTCTCTTCACGT",7,108.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A42R Y66H C150N P177I",4
"lib1","SARS-CoV-2","ATCGCTCTGTACACAC",2,39.53,6.1,-4.66,0.55,2,1.14,0.01,">1 nonsynonymous","R16I C158V",2
"lib1","SARS-CoV-2","ATCGCTGAAACGTCCC",8,5.48,NA,NA,NA,NA,NA,NA,"stop","F8L C49* P161A A190R",4
"lib1","SARS-CoV-2","ATCGCTGGGATATAGC",2,53.25,10.81,0.04,0.05,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCGCTGTAACTTAGG",1,34.83,6,-4.76,0.74,1.5,1.1,0,">1 nonsynonymous","S43D I142F P177V T201D",4
"lib1","SARS-CoV-2","ATCGCTTAAGTCATCC",2,44.68,10.24,-0.53,0.11,2.45,1.06,0,"1 nonsynonymous","K94S",1
"lib1","SARS-CoV-2","ATCGCTTATGCATGAA",11,260.51,10.63,-0.14,0.03,2.92,1.03,0,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","ATCGCTTCTAAATGAC",1,8.79,10.53,-0.24,0.13,2.8,1.15,0.01,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","ATCGCTTTAACGCCAA",1,11.23,8.99,-1.77,0.14,2.98,1,0.01,">1 nonsynonymous","Y119V T140C",2
"lib1","SARS-CoV-2","ATCGCTTTCGATGTGT",4,68.09,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V77G W106E P177D T201M",4
"lib1","SARS-CoV-2","ATCGGAAAACAACGAT",3,73.92,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6S L38K A105V G152P F156V",5
"lib1","SARS-CoV-2","ATCGGAAAAGGGAATT",12,156.49,9.6,-1.17,0.12,1.77,1.07,0.01,">1 nonsynonymous","G51L F62S",2
"lib1","SARS-CoV-2","ATCGGAATCTCGCGCA",2,39.57,10.78,0.02,0.11,2.93,1.07,0,"1 nonsynonymous","K56E",1
"lib1","SARS-CoV-2","ATCGGACAAAATAACA",1,27.13,10.64,-0.13,0.07,2.88,1,0,">1 nonsynonymous","G51Q N109L L122Y",3
"lib1","SARS-CoV-2","ATCGGACTCTGTGAAT",2,75.2,6,-4.76,1.38,1.5,1.18,0.02,">1 nonsynonymous","F12G W23M C31F D112G",4
"lib1","SARS-CoV-2","ATCGGACTTGTTTAAA",7,59.54,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","L60S F99Y Y123S E135C T140L Y175W",6
"lib1","SARS-CoV-2","ATCGGAGAAATAATCT",4,32.26,6.24,-4.53,0.71,1.5,1.06,0.03,">1 nonsynonymous","A81I G86S S113Q N157S T193Y V194G",6
"lib1","SARS-CoV-2","ATCGGAGATGTATTAG",4,28.68,7,-3.76,0.23,2.26,1.18,0.01,">1 nonsynonymous","V11L N64H D137W P149T",4
"lib1","SARS-CoV-2","ATCGGAGTAATCGAAG",2,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G V77S P96R T100F N107S",5
"lib1","SARS-CoV-2","ATCGGAGTCATAAGGT",11,2.82,NA,NA,NA,NA,NA,NA,"stop","T85* S139F",2
"lib1","SARS-CoV-2","ATCGGAGTTAGAACCG",3,31.22,10.6,-0.16,0.05,2.94,1.07,0,"1 nonsynonymous","P169R",1
"lib1","SARS-CoV-2","ATCGGATAAGAATGGC",3,42.6,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N110P Y143F G152N C158L K198M",5
"lib1","SARS-CoV-2","ATCGGCAATGGAAAGG",1,22.25,10.74,-0.03,0.06,2.91,1.06,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","ATCGGCATATGACACC",9,35.52,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","K48N Y93Q",2
"lib1","SARS-CoV-2","ATCGGCCATATACTAC",1,10.38,11.07,0.31,0.11,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCGGCCCTTGTCGGT",2,29.71,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","E10F R124M S139L",3
"lib1","SARS-CoV-2","ATCGGCGATCATTCTA",3,64.19,10.66,-0.11,0.09,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCGGCTACTAATAAA",5,69.18,10.47,-0.29,0.05,2.87,1.07,0,">1 nonsynonymous","F17W Y35P S53N D75K P197A",5
"lib1","SARS-CoV-2","ATCGGGAACCTCTAAT",1,13.68,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C31S T55A S113C K132C",4
"lib1","SARS-CoV-2","ATCGGGAATACCTGCT",1,3.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","ATCGGGAATTTCCGGA",2,77.02,10,-0.76,0.11,2.53,1.02,0,">1 nonsynonymous","S41T Q79R T201K",3
"lib1","SARS-CoV-2","ATCGGGACCTTAAAAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","W23* V32S D90E P96I",4
"lib1","SARS-CoV-2","ATCGGGAGAGTCCTAT",5,59.54,10.33,-0.44,0.04,2.89,1.03,0,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","ATCGGGAGATAACATG",8,195.36,10.17,-0.59,0.04,2.84,1.02,0,">1 nonsynonymous","L60W I142Y",2
"lib1","SARS-CoV-2","ATCGGGCATTTTAGCT",7,75.52,9.73,-1.03,0.07,2.13,1.06,0,">1 nonsynonymous","I88M N120R",2
"lib1","SARS-CoV-2","ATCGGGCTCCACATCT",3,36.99,6.07,-4.69,0.76,1.5,1.21,0.02,">1 nonsynonymous","G83L V103I G116R Y143R",4
"lib1","SARS-CoV-2","ATCGGGGAATAAACAC",2,10.6,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","E10H C49H S69T W106I L122R R136L",6
"lib1","SARS-CoV-2","ATCGGGGCAAGCATCC",9,104.92,6,-4.76,1.28,1.5,1.18,0.01,">1 nonsynonymous","N92V T100S N171T",3
"lib1","SARS-CoV-2","ATCGGGGCCAGTGTAA",3,17.98,8.33,-2.44,0.19,1.83,1.13,0.01,"1 nonsynonymous","D112N",1
"lib1","SARS-CoV-2","ATCGGGTAAAAGACAG",4,72.71,8.35,-2.42,0.2,1.5,1.07,0.01,">1 nonsynonymous","Y119T R127M",2
"lib1","SARS-CoV-2","ATCGGGTTCACACGCG",6,0.71,NA,NA,NA,NA,NA,NA,"stop","N4Q A42N G86K S129* L187G",5
"lib1","SARS-CoV-2","ATCGGTATCAATAGCT",2,89.13,9.07,-1.69,0.06,2.86,1.05,0,">1 nonsynonymous","S29M A42L G166T",3
"lib1","SARS-CoV-2","ATCGGTATGGACAATT",2,65.63,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S19A Y39D S45L V71Y A105C",5
"lib1","SARS-CoV-2","ATCGGTCCGTGGTCAT",3,39.06,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y50I N120F Y143W N157S",4
"lib1","SARS-CoV-2","ATCGGTCGTATACATG",1,31.54,10.15,-0.61,0.11,2.24,1.02,0,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","ATCGGTCTACGCCCCT",3,43.58,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","L5P V77R Y143R Y159K",4
"lib1","SARS-CoV-2","ATCGGTCTGAGTAGTG",1,5.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F D59Y I88C V182G",4
"lib1","SARS-CoV-2","ATCGGTGACCAACCAA",6,30.86,6.29,-4.47,0.89,1.5,1.25,0.05,">1 nonsynonymous","N4V V103R",2
"lib1","SARS-CoV-2","ATCGGTGATCGACGCC",8,167.37,9.93,-0.83,0.06,2.39,1.05,0,">1 nonsynonymous","F62Y A105I",2
"lib1","SARS-CoV-2","ATCGGTGTCTAAATTG",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Y N171I A190H",3
"lib1","SARS-CoV-2","ATCGGTTATGGGAGTT",1,33.2,10.35,-0.42,0.06,2.82,1,0,">1 nonsynonymous","A105T K114R R136Q",3
"lib1","SARS-CoV-2","ATCGGTTGTTTGCTGC",3,41.23,10.56,-0.21,0.06,2.89,1.05,0,">1 nonsynonymous","R27W S43F T201L",3
"lib1","SARS-CoV-2","ATCGGTTTATTCAGAT",3,71,9.2,-1.57,0.09,2.48,1.14,0,">1 nonsynonymous","L38F Y121V",2
"lib1","SARS-CoV-2","ATCGTAAAAACGGGTG",1,5.47,10.48,-0.28,0.09,2.92,1.05,0,">1 nonsynonymous","Y39Q D98R",2
"lib1","SARS-CoV-2","ATCGTAAAAGACACCC",1,28.43,10.61,-0.16,0.07,3,1,0,">1 nonsynonymous","N58L S200L",2
"lib1","SARS-CoV-2","ATCGTAAAATACTTAA",5,162.09,10.63,-0.13,0.05,2.87,1.08,0,">1 nonsynonymous","L60Y T85F T148N S200A",4
"lib1","SARS-CoV-2","ATCGTAAAGAGTCACC",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G D68R G101W Q144K",4
"lib1","SARS-CoV-2","ATCGTAACAATTGTGA",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N K94V Y121V",3
"lib1","SARS-CoV-2","ATCGTAACCAGAAAGG",5,62.53,6.61,-4.15,0.25,1.96,1.14,0.01,"1 nonsynonymous","C150K",1
"lib1","SARS-CoV-2","ATCGTACCATCCCCAT",2,22.21,NA,NA,NA,NA,NA,NA,"stop","A89E N107*",2
"lib1","SARS-CoV-2","ATCGTACCCTAACGAT",1,4.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A67S",1
"lib1","SARS-CoV-2","ATCGTACCTGCGCCCC",2,58.12,8.95,-1.82,0.29,1.5,1,0.04,">1 nonsynonymous","A14V S29R G51H I142F",4
"lib1","SARS-CoV-2","ATCGTACGACGCACTT",4,102.45,6,-4.76,2,1.5,1.27,0.03,"1 nonsynonymous","P177E",1
"lib1","SARS-CoV-2","ATCGTACTAATAAGCT",6,108.02,10.34,-0.42,0.03,2.9,1,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","ATCGTACTATCTTTAT",5,43.57,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G86V V181F",2
"lib1","SARS-CoV-2","ATCGTACTCTAATTAT",3,132.07,10.04,-0.72,0.08,2.28,1.02,0,"1 nonsynonymous","C102M",1
"lib1","SARS-CoV-2","ATCGTAGAACTCCATG",7,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R V103E Y123A F156S",4
"lib1","SARS-CoV-2","ATCGTAGAGAACCATG",2,55.6,10.62,-0.15,0.06,2.9,1.07,0,"1 nonsynonymous","Y178W",1
"lib1","SARS-CoV-2","ATCGTAGATAAATAAT",2,21.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S D97S A105S F156V L183I",5
"lib1","SARS-CoV-2","ATCGTAGATATCCTCC",2,35.19,10.61,-0.15,0.12,2.9,1.09,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ATCGTAGCCTATTTCT",4,75.54,10.82,0.05,0.08,2.86,1.09,0,"1 nonsynonymous","V37W",1
"lib1","SARS-CoV-2","ATCGTAGGAGTGGTGC",5,3.53,NA,NA,NA,NA,NA,NA,"stop","P7D K94*",2
"lib1","SARS-CoV-2","ATCGTAGGCGAAGAAC",2,167.42,10.65,-0.12,0.05,2.87,1.06,0,">1 nonsynonymous","V11I K87F K128A",3
"lib1","SARS-CoV-2","ATCGTATAAGGCAGTA",12,161.33,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8T V37W I80T E135W G166A S184Y",6
"lib1","SARS-CoV-2","ATCGTATGAACCCACG",5,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E K94V S108P",3
"lib1","SARS-CoV-2","ATCGTATGCGCACCCT",4,90.82,9.82,-0.94,0.09,2.32,1.05,0,">1 nonsynonymous","N4Y T46A Y178W",3
"lib1","SARS-CoV-2","ATCGTCAACCCAGATG",3,12.63,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12I Y39A A105R V153S S184C",5
"lib1","SARS-CoV-2","ATCGTCAATAAAGGAC",4,75.2,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F17M Y119N R127N",3
"lib1","SARS-CoV-2","ATCGTCACAAGTCCAG",1,15.62,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K56I F99K W106Q D112P I138P",5
"lib1","SARS-CoV-2","ATCGTCATAGTGACCA",7,19.39,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G9S A89I D97W I104T",4
"lib1","SARS-CoV-2","ATCGTCCAGTACATAC",2,5.51,10.47,-0.29,0.14,2.98,1,0,">1 nonsynonymous","K87M I142M",2
"lib1","SARS-CoV-2","ATCGTCCATCAACGCG",4,13.41,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","D97G N120L C150A",3
"lib1","SARS-CoV-2","ATCGTCCCGGCCCCAA",4,66.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V32C A81V S108I G152M",4
"lib1","SARS-CoV-2","ATCGTCCCTGACAATC",3,233.95,9.64,-1.13,0.09,2.23,1.05,0,">1 nonsynonymous","L60S N107P E141L",3
"lib1","SARS-CoV-2","ATCGTCCTACCCAAAA",4,89.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36K P96S N157T Y165T A190V",5
"lib1","SARS-CoV-2","ATCGTCTAAGACCATT",3,31.9,9.06,-1.7,0.28,1.51,1.11,0.03,">1 nonsynonymous","C49F T55I G155R",3
"lib1","SARS-CoV-2","ATCGTCTCTAAGTTAA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","C61H A81F E141K P149*",4
"lib1","SARS-CoV-2","ATCGTGAAACGTAACA",5,99.23,10.69,-0.08,0.05,2.88,1.07,0,">1 nonsynonymous","N130T F160G",2
"lib1","SARS-CoV-2","ATCGTGCACATTAAAT",1,69.88,10.12,-0.65,0.07,2.75,1.04,0,">1 nonsynonymous","T55A A89T D97L K132S",4
"lib1","SARS-CoV-2","ATCGTGCGGAATCGAT",6,43.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M E10S I88D P96C L122T T148V",6
"lib1","SARS-CoV-2","ATCGTGCTTTACACCC",1,0.32,NA,NA,NA,NA,NA,NA,"stop","S29Y S36C A42V G51S A89T N107T N120* G166V",8
"lib1","SARS-CoV-2","ATCGTGCTTTCTTAGT",2,17.72,6.79,-3.98,0.37,1.5,1.1,0.03,">1 nonsynonymous","N120R R179I",2
"lib1","SARS-CoV-2","ATCGTGGAAAAATAAT",7,52.7,10.08,-0.69,0.14,2.33,1,0.01,">1 nonsynonymous","N13S N58L",2
"lib1","SARS-CoV-2","ATCGTGTTAGTCTAAA",6,0.4,NA,NA,NA,NA,NA,NA,"stop","L60T S113* D137* F185D",4
"lib1","SARS-CoV-2","ATCGTTAATCGAGTTA",7,55.96,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L131W N151F",2
"lib1","SARS-CoV-2","ATCGTTAATTACTAAA",7,81.89,10.75,-0.01,0.08,2.91,1.06,0,"1 nonsynonymous","N1R",1
"lib1","SARS-CoV-2","ATCGTTACTTACCAAC",2,63.99,10.23,-0.53,0.06,2.62,1.02,0,">1 nonsynonymous","N58R T63K D90Y E154R",4
"lib1","SARS-CoV-2","ATCGTTAGTATCAACA",2,50.01,9.96,-0.8,0.11,2.25,1.01,0,">1 nonsynonymous","N24R F62M W106R",3
"lib1","SARS-CoV-2","ATCGTTATCTAAAACT",2,16.77,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V11R G146V",2
"lib1","SARS-CoV-2","ATCGTTATGTTTTACT",4,76.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N P54R V103L I142M V180I",5
"lib1","SARS-CoV-2","ATCGTTCATATAATGC",2,51.78,10.08,-0.68,0.08,2.38,1.06,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","ATCGTTCGAATTTACC",2,17.65,10.8,0.04,0.09,2.98,1.02,0,"1 nonsynonymous","S41D",1
"lib1","SARS-CoV-2","ATCGTTCGTTGCTTAT",1,14.31,10.14,-0.62,0.1,2.64,1.1,0.01,">1 nonsynonymous","T15I G116S",2
"lib1","SARS-CoV-2","ATCGTTGAAACTATTG",6,104.67,8.72,-2.04,0.12,1.83,1.13,0.01,">1 nonsynonymous","A81V S139A P149N F156L",4
"lib1","SARS-CoV-2","ATCGTTGGCCACACCC",4,90.83,10.48,-0.29,0.06,2.84,1.11,0,">1 nonsynonymous","A42V K128L",2
"lib1","SARS-CoV-2","ATCGTTGTTGAGGGCG",5,57.86,7.58,-3.18,0.12,1.5,1.08,0,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","ATCGTTTCCGCTTCAC",3,65.61,10.59,-0.18,0.04,2.87,1.06,0,">1 nonsynonymous","P54R L60R Q84S P197D",4
"lib1","SARS-CoV-2","ATCGTTTCTGTGAGGT",3,21.73,6,-4.76,2,1.5,1.4,0.08,">1 nonsynonymous","I2R R78A C102D L111P F167L T201H",6
"lib1","SARS-CoV-2","ATCGTTTTCTTGGATG",6,1.5,NA,NA,NA,NA,NA,NA,"stop","N64T G174* T201F",3
"lib1","SARS-CoV-2","ATCTAAAAAATTAACA",9,90.17,10.22,-0.54,0.04,2.88,1,0,">1 nonsynonymous","T15R T55I F160P",3
"lib1","SARS-CoV-2","ATCTAAAAACCTAAGG",4,0.66,NA,NA,NA,NA,NA,NA,"stop","L5T S19* S113P C150S C158S T170L",6
"lib1","SARS-CoV-2","ATCTAAAAAGAAAGAC",2,17.3,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","S36T S45P D90R Y123N P133A G155S P191R",7
"lib1","SARS-CoV-2","ATCTAAAAATGTACGG",4,105.16,10.71,-0.06,0.04,2.91,1.04,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","ATCTAAAATGCAGAAC",1,67.81,9.17,-1.59,0.11,2.17,1.13,0.01,">1 nonsynonymous","T3M V52S Y119R K198G",4
"lib1","SARS-CoV-2","ATCTAAACACATTAAC",1,87.83,10.88,0.11,0.06,2.93,1.03,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","ATCTAAACAGAACAGG",8,183.16,10.04,-0.73,0.06,2.67,1.03,0,">1 nonsynonymous","G9R F44T I138C",3
"lib1","SARS-CoV-2","ATCTAAACATAGTCAA",8,27.42,NA,NA,NA,NA,NA,NA,"stop","V20G D68G N107* G152I",4
"lib1","SARS-CoV-2","ATCTAAACATTAGAGA",7,41.32,10.78,0.02,0.13,2.84,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCTAAACCAACGACT",2,18.59,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R16S G74E L95G Y119V T201A",5
"lib1","SARS-CoV-2","ATCTAAACCCCCACAA",4,14.53,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V20K F44T S139L",3
"lib1","SARS-CoV-2","ATCTAAACGAACTCGG",2,9.87,6.08,-4.69,1.15,1.5,1.17,0.03,">1 nonsynonymous","L5I D90A D98C N120W F167N",5
"lib1","SARS-CoV-2","ATCTAAACTAGGACCT",2,70.42,10.27,-0.49,0.07,2.83,1,0,">1 nonsynonymous","A42G G155Y",2
"lib1","SARS-CoV-2","ATCTAAACTAGTGATT",1,34.96,10.76,0,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTAAAGAAGAAAAT",11,102.5,8.52,-2.25,0.12,1.85,1.13,0.01,">1 nonsynonymous","K87H F99W V103M P169S",4
"lib1","SARS-CoV-2","ATCTAAAGGAAAAGGC",10,138.48,9.91,-0.86,0.1,2.07,1.04,0,">1 nonsynonymous","E10P S43L F99V P197L",4
"lib1","SARS-CoV-2","ATCTAAAGTGTATGTT",4,56.4,10.78,0.01,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTAAATAATCAACA",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N T15H I72S A105Q N157R S164R",6
"lib1","SARS-CoV-2","ATCTAAATAGCTATAT",7,198.68,8.9,-1.86,0.06,2.82,1.13,0,">1 nonsynonymous","I142S P149F H189D",3
"lib1","SARS-CoV-2","ATCTAAATGAGCAAAT",11,160.68,7.36,-3.4,0.11,1.92,1.14,0,">1 nonsynonymous","T85S Y143V G166L P191T",4
"lib1","SARS-CoV-2","ATCTAACAAATGCATA",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G V20Q",2
"lib1","SARS-CoV-2","ATCTAACAAGCTTAAA",4,53.32,10.75,-0.01,0.05,2.92,1.05,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","ATCTAACAAGTTGTAA",2,24.04,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S36Q R124V G152F F156L",4
"lib1","SARS-CoV-2","ATCTAACACACATAGT",8,223.32,10.27,-0.5,0.07,2.93,1.01,0,">1 nonsynonymous","L60N K87N",2
"lib1","SARS-CoV-2","ATCTAACAGGAGGGAG",5,84.14,10.82,0.06,0.07,2.9,1.07,0,">1 nonsynonymous","F47L L122S",2
"lib1","SARS-CoV-2","ATCTAACATAGATCAA",2,34.92,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","Y93W T148K",2
"lib1","SARS-CoV-2","ATCTAACCCTTCGTAG",1,49.97,9.96,-0.81,0.07,2.56,1.02,0,">1 nonsynonymous","S41T G83V V173A",3
"lib1","SARS-CoV-2","ATCTAACCGTACCGCA",3,30.81,9.37,-1.39,0.17,1.98,1.11,0.01,">1 nonsynonymous","V52L Y121V S184Q",3
"lib1","SARS-CoV-2","ATCTAACGAAACATGG",5,137.76,10.7,-0.06,0.07,2.84,1.09,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","ATCTAACGAACTACCC",6,41.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6G F44E N92P T201R",4
"lib1","SARS-CoV-2","ATCTAACTAGTAATGG",6,49.83,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T140R G172R",2
"lib1","SARS-CoV-2","ATCTAACTCGGTGTGA",2,58.54,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","C102P I142H G146S",3
"lib1","SARS-CoV-2","ATCTAACTGCTGCATT",10,3.73,NA,NA,NA,NA,NA,NA,"stop","N40H C102* D112L L188P",4
"lib1","SARS-CoV-2","ATCTAAGAAAGAGAAT",6,59.78,10.65,-0.11,0.07,2.81,1.08,0,"1 nonsynonymous","T148E",1
"lib1","SARS-CoV-2","ATCTAAGACGCAACAG",2,8.19,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A18I V37F W106G",3
"lib1","SARS-CoV-2","ATCTAAGCATATTTTC",3,118.91,9.83,-0.93,0.06,2.88,1.05,0,"1 nonsynonymous","T170F",1
"lib1","SARS-CoV-2","ATCTAAGCGTACGGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C49Y K56*",2
"lib1","SARS-CoV-2","ATCTAAGCGTCTACGA",1,7.24,8.61,-2.15,0.14,3,1,0.01,">1 nonsynonymous","L5P Q176G",2
"lib1","SARS-CoV-2","ATCTAAGTATTAATAC",2,41.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G101Y E154Y",2
"lib1","SARS-CoV-2","ATCTAAGTCATGAATG",1,0.74,NA,NA,NA,NA,NA,NA,"stop","W106L Y119C Y143* T201K",4
"lib1","SARS-CoV-2","ATCTAATAAAAACAGT",5,84.77,10.23,-0.54,0.05,2.91,1,0,">1 nonsynonymous","V32R A42S F134N A190C P197T",5
"lib1","SARS-CoV-2","ATCTAATAAACTGGAT",4,65.46,10.76,0,0.06,2.84,1.05,0,">1 nonsynonymous","S45T N151H",2
"lib1","SARS-CoV-2","ATCTAATAACATGTTA",8,71.43,10.68,-0.08,0.06,2.92,1.05,0,"1 nonsynonymous","F160D",1
"lib1","SARS-CoV-2","ATCTAATAGAAAATTT",2,28.73,7.09,-3.68,0.33,1.5,1.08,0.03,">1 nonsynonymous","G9D Y35H F62L A81K A105I T201K",6
"lib1","SARS-CoV-2","ATCTAATATTCCACAT",3,13.73,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99N E154S",2
"lib1","SARS-CoV-2","ATCTAATATTCCGAAA",6,131.99,7.45,-3.32,0.19,1.5,1.08,0.01,">1 nonsynonymous","A14S N30R Q84K D112T",4
"lib1","SARS-CoV-2","ATCTAATCAAAGTCCA",1,94.28,9.93,-0.83,0.1,2.38,1.03,0,">1 nonsynonymous","L60A S139Y",2
"lib1","SARS-CoV-2","ATCTAATCACAGAATT",8,95.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35N K56I K87T K128A N157W",5
"lib1","SARS-CoV-2","ATCTAATCAGAACCTA",2,34.03,10.51,-0.25,0.1,2.84,1.01,0,">1 nonsynonymous","N40L V173F",2
"lib1","SARS-CoV-2","ATCTAATCATCAGCAA",3,12.97,8.45,-2.32,0.32,1.5,1.14,0.03,">1 nonsynonymous","S29V A89M",2
"lib1","SARS-CoV-2","ATCTAATCATTATCCG",1,5.89,10.88,0.11,0.38,2.97,1,0.01,">1 nonsynonymous","P149H A190T",2
"lib1","SARS-CoV-2","ATCTAATCCAACGGTT",2,5.82,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G74T D97F G117L C150D P169V",5
"lib1","SARS-CoV-2","ATCTAATCCCAGATTT",9,1.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","ATCTAATCGTCCCAAA",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q V65F Q84I I104N",4
"lib1","SARS-CoV-2","ATCTAATCTTAACGAA",2,22.1,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K48R P54R I88N V103I L122H E135W",6
"lib1","SARS-CoV-2","ATCTAATCTTCATACC",1,17.18,9.96,-0.81,0.12,2.13,1.09,0,">1 nonsynonymous","L5N A89I T148A",3
"lib1","SARS-CoV-2","ATCTAATGACAACAAT",1,24.06,9.11,-1.66,0.1,1.88,1.05,0,">1 nonsynonymous","C6D T55V Q84L",3
"lib1","SARS-CoV-2","ATCTAATGATAAACTA",3,95.54,6.49,-4.27,0.33,1.5,1.12,0.01,">1 nonsynonymous","R73A S113P L188V",3
"lib1","SARS-CoV-2","ATCTAATGCAAACCTA",8,42.2,6.13,-4.64,0.81,1.5,1.15,0.02,">1 nonsynonymous","W23L C61T T85G A145S T201N",5
"lib1","SARS-CoV-2","ATCTAATGGTTAATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40R G146L",2
"lib1","SARS-CoV-2","ATCTAATGTGCACCAA",2,13.16,10.69,-0.07,0.14,2.93,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCTAATTAACTTCTA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103H Y178I L183A",3
"lib1","SARS-CoV-2","ATCTAATTATGGTACA",3,20.88,8.76,-2.01,0.24,1.96,1.16,0.02,">1 nonsynonymous","Y35M S41R Q79L A89S K132N",5
"lib1","SARS-CoV-2","ATCTAATTTACACAAA",6,0.02,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","ATCTACAAATCTAATC",11,189.5,10.77,0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTACAACACTCTTT",5,40.47,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N1Y F8I L60N D68R P149R",5
"lib1","SARS-CoV-2","ATCTACAAGAGGCAAA",9,120.61,9.5,-1.26,0.09,2.7,1.12,0,">1 nonsynonymous","I142C N151S",2
"lib1","SARS-CoV-2","ATCTACAAGTCCAAAT",1,0.91,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ATCTACACCTTACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3F A14V V32R F99L V103T N110*",6
"lib1","SARS-CoV-2","ATCTACAGATTTAAAA",4,55.38,9.87,-0.9,0.11,2.43,1.11,0,">1 nonsynonymous","C6I L122C",2
"lib1","SARS-CoV-2","ATCTACAGGACATGTG",7,62.84,9.73,-1.03,0.14,2.16,1.07,0.01,"1 nonsynonymous","A89M",1
"lib1","SARS-CoV-2","ATCTACATCAATTTCT",4,48.98,10.03,-0.73,0.08,2.79,1.07,0,">1 nonsynonymous","G174F P191M",2
"lib1","SARS-CoV-2","ATCTACATCCATGAAC",9,40.03,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","D68G L95P",2
"lib1","SARS-CoV-2","ATCTACATCTCACGAG",1,19.18,9.81,-0.95,0.15,1.98,1.02,0.01,">1 nonsynonymous","I2K Q84L D90G",3
"lib1","SARS-CoV-2","ATCTACATTAAAACAA",7,128.45,10.84,0.07,0.09,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTACATTTAGGAAA",6,121.28,6,-4.76,0.88,1.5,1.19,0.01,">1 nonsynonymous","R16I A22G L60T Q79M G83E C158L",6
"lib1","SARS-CoV-2","ATCTACCACCTATTCT",3,23.05,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11N N107F",2
"lib1","SARS-CoV-2","ATCTACCATGATGACA",1,72.95,9.33,-1.44,0.14,2.28,1.13,0.01,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","ATCTACCCACGGTGTG",1,26.89,8.93,-1.84,0.1,2.46,1.13,0,">1 nonsynonymous","I28V L38I N64T Y119R G174S",5
"lib1","SARS-CoV-2","ATCTACCTAAAATATA",3,102.93,10.44,-0.33,0.04,2.93,1.01,0,">1 nonsynonymous","K114T F134S",2
"lib1","SARS-CoV-2","ATCTACCTACTGACGT",10,97.52,10.69,-0.07,0.08,2.89,1.07,0,">1 nonsynonymous","T55H T63S",2
"lib1","SARS-CoV-2","ATCTACCTATATATAC",5,90.91,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V37A F99M P161L",3
"lib1","SARS-CoV-2","ATCTACCTCATGAAAT",12,43.28,10.78,0.02,0.06,2.89,1.06,0,"1 nonsynonymous","T63V",1
"lib1","SARS-CoV-2","ATCTACCTTACAGTCA",1,25.01,8.77,-1.99,0.05,2.72,1.03,0,">1 nonsynonymous","E154K Q176E",2
"lib1","SARS-CoV-2","ATCTACGAAATGGGGG",1,7.74,9.44,-1.32,0.38,1.5,1.09,0.05,">1 nonsynonymous","N58M I88V W106Q",3
"lib1","SARS-CoV-2","ATCTACGATACACATG",10,4.84,NA,NA,NA,NA,NA,NA,"stop","I28F V71* V77G Q84P G116S C150T Q163S A190E S200Y",9
"lib1","SARS-CoV-2","ATCTACTACTAGGGAT",3,48.74,10.31,-0.46,0.05,2.88,1,0,">1 nonsynonymous","R16S N118Y",2
"lib1","SARS-CoV-2","ATCTACTAGTAAGAAG",1,10.42,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","F12T N64E A105Q C158I",4
"lib1","SARS-CoV-2","ATCTACTAGTGGATCA",3,54.21,7.83,-2.93,0.35,1.5,1.13,0.03,">1 nonsynonymous","Y39S T63A Y91E",3
"lib1","SARS-CoV-2","ATCTACTAGTTACCAA",3,57.14,10.4,-0.36,0.06,2.84,1.05,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","ATCTAGAAAATAATTA",1,39.35,8.44,-2.32,0.25,1.99,1.22,0.02,">1 nonsynonymous","L122R P161I",2
"lib1","SARS-CoV-2","ATCTAGAAACCAGAAG",6,0.16,NA,NA,NA,NA,NA,NA,"stop","H189*",1
"lib1","SARS-CoV-2","ATCTAGAATGTAAGAT",6,94.18,9.62,-1.14,0.06,2.84,1.07,0,">1 nonsynonymous","I2R N64R K87V F156R",4
"lib1","SARS-CoV-2","ATCTAGAATTGAAATC",1,27.07,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","R25C Y119V T170R V181R",4
"lib1","SARS-CoV-2","ATCTAGAGACCCAATA",5,126.47,10.67,-0.1,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTAGAGGTACAGTT",5,95.58,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35R I88L L122P L162T K199I",5
"lib1","SARS-CoV-2","ATCTAGATTGAGGAAG",2,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C C49Y G86E",3
"lib1","SARS-CoV-2","ATCTAGCATATACGCC",3,59.71,9.15,-1.61,0.05,2.74,1.07,0,">1 nonsynonymous","N118L F134G",2
"lib1","SARS-CoV-2","ATCTAGCCATCAATAT",3,40.09,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I28G C49V A89V C102V Y165S K199N",6
"lib1","SARS-CoV-2","ATCTAGCGATTCATAG",5,0.63,NA,NA,NA,NA,NA,NA,"stop","R73E T148*",2
"lib1","SARS-CoV-2","ATCTAGCTAGCGGACC",11,139.75,6.03,-4.73,0.86,1.5,1.21,0.01,">1 nonsynonymous","I28H F62R I88Q E141T P161G",5
"lib1","SARS-CoV-2","ATCTAGCTTCGAGCAG",3,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N I104N P149A Y159K V181P S200Q",6
"lib1","SARS-CoV-2","ATCTAGGAAAAAAAAT",2,69.02,9.11,-1.66,0.13,2.02,1.12,0.01,">1 nonsynonymous","R27G S41L K56R G146D",4
"lib1","SARS-CoV-2","ATCTAGGAAGGACAAG",3,42.01,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N4H E10L F44V P133V P149F",5
"lib1","SARS-CoV-2","ATCTAGGACGCGCTTG",2,44.97,10.49,-0.27,0.06,2.92,1.03,0,">1 nonsynonymous","G9L D97M E141D",3
"lib1","SARS-CoV-2","ATCTAGGAGCTTCAGA",6,1.43,NA,NA,NA,NA,NA,NA,"stop","I72* G86N D98Y N118D",4
"lib1","SARS-CoV-2","ATCTAGGAGTAAGCTA",3,29,10.92,0.16,0.09,2.96,1.03,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","ATCTAGGAGTGAAGTT",4,0.54,NA,NA,NA,NA,NA,NA,"stop","P96R V103L V173*",3
"lib1","SARS-CoV-2","ATCTAGGATAAGTTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6T D98* L122Y Q144L",4
"lib1","SARS-CoV-2","ATCTAGGCATCACACC",3,8.68,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5Q S45R S129Y V182F",4
"lib1","SARS-CoV-2","ATCTAGGCCACCGTTT",2,53.1,10.6,-0.16,0.09,2.81,1,0,"1 nonsynonymous","Y39C",1
"lib1","SARS-CoV-2","ATCTAGGGTTTAGTTG",2,15.95,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","K87W N120D R124V F160H",4
"lib1","SARS-CoV-2","ATCTAGTAAGCAGTTT",4,50.35,10.76,-0.01,0.08,2.89,1.05,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","ATCTAGTAGCTTTGTA",5,62.59,9.05,-1.71,0.12,2.33,1.1,0.01,"1 nonsynonymous","R73I",1
"lib1","SARS-CoV-2","ATCTAGTCATAACTGA",2,10.42,10.01,-0.75,0.18,2.3,1.05,0.01,">1 nonsynonymous","V20S K198A",2
"lib1","SARS-CoV-2","ATCTAGTGCAAATTTA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81Y G86T",2
"lib1","SARS-CoV-2","ATCTAGTTGTCGGACC",5,15.02,9.09,-1.67,0.24,1.78,1.28,0.04,">1 nonsynonymous","N58F V65H",2
"lib1","SARS-CoV-2","ATCTATAAGCTACGCA",5,150.51,9.46,-1.3,0.06,2.84,1.07,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","ATCTATAAGTACCCTG",15,276.1,6.49,-4.28,0.34,1.5,1.15,0.01,">1 nonsynonymous","R27M K87V R179N",3
"lib1","SARS-CoV-2","ATCTATAAGTAGTAAG",2,85.72,8.9,-1.87,0.1,2.75,1.12,0,">1 nonsynonymous","N4F N157G",2
"lib1","SARS-CoV-2","ATCTATAAGTGATGAT",3,20.63,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","P7Y E76I G86I A105K",4
"lib1","SARS-CoV-2","ATCTATAATATAGGAT",2,35.3,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F70L Q79K A89N G116M L122A",5
"lib1","SARS-CoV-2","ATCTATACATCACGAA",6,5.25,6.52,-4.24,0.88,2.17,1.17,0.01,">1 nonsynonymous","T15L S41V P96W K114L",4
"lib1","SARS-CoV-2","ATCTATACCTCGTCAC",1,28.59,10.35,-0.41,0.05,2.97,1,0,">1 nonsynonymous","G9Q D90Y",2
"lib1","SARS-CoV-2","ATCTATACTACCTGCG",5,15.62,6.24,-4.53,0.7,1.5,1.09,0.02,">1 nonsynonymous","T3P A14L C31H V77K A81G E141Q P149S V173S",8
"lib1","SARS-CoV-2","ATCTATAGCGCAGGAA",5,22.97,6,-4.76,2,3,1.19,0,">1 nonsynonymous","Y93D Y121S K198A",3
"lib1","SARS-CoV-2","ATCTATAGTGGATGTG",1,6.26,10.73,-0.03,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTATATAAAAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* C6I T63Y S113A Y175Q",5
"lib1","SARS-CoV-2","ATCTATATAAATAATG",3,42.14,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y39V F44S D59S R124T Q144V",5
"lib1","SARS-CoV-2","ATCTATATAAATCCCC",3,12.21,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y50I N107D L122T",3
"lib1","SARS-CoV-2","ATCTATATCAGAATAC",2,24.78,6.23,-4.53,0.71,1.5,1.08,0.05,">1 nonsynonymous","G9C K94P G101C E154I",4
"lib1","SARS-CoV-2","ATCTATATCGTTATTC",2,36.58,9.68,-1.08,0.09,2.82,1.06,0,">1 nonsynonymous","C6D G174R T193Q",3
"lib1","SARS-CoV-2","ATCTATATGTCACTGT",1,12.64,6,-4.76,0.97,3,1.17,0.02,">1 nonsynonymous","T3I C150N",2
"lib1","SARS-CoV-2","ATCTATATTCAACAAA",5,94.38,8.64,-2.13,0.1,2.68,1.08,0,">1 nonsynonymous","N24A D97F G166I",3
"lib1","SARS-CoV-2","ATCTATCAACCAATAA",6,60.29,8.8,-1.96,0.19,1.5,1.17,0.02,">1 nonsynonymous","S19L S164R",2
"lib1","SARS-CoV-2","ATCTATCAACCAGAAT",4,49.31,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F17Q Y50I D98K",3
"lib1","SARS-CoV-2","ATCTATCAGCTAGAAA",16,5.53,NA,NA,NA,NA,NA,NA,"stop","C61* L95H N107A A145S",4
"lib1","SARS-CoV-2","ATCTATCATAGCACTA",2,45.68,8.35,-2.41,0.3,1.5,1,0.04,">1 nonsynonymous","L5M A14T D68T Q84V",4
"lib1","SARS-CoV-2","ATCTATCATCCTACCA",11,218.16,9.62,-1.14,0.07,2.76,1.06,0,">1 nonsynonymous","T55G Y165H",2
"lib1","SARS-CoV-2","ATCTATCATTCCATCA",2,54.22,10.77,0,0.03,2.93,1.04,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","ATCTATCGCCCGCGAT",5,59.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12R V103A",2
"lib1","SARS-CoV-2","ATCTATCGCTCTCTCC",7,158.38,10.8,0.04,0.06,2.9,1.06,0,">1 nonsynonymous","L5I L122T K199N",3
"lib1","SARS-CoV-2","ATCTATCTAGCCCTCT",5,73.48,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y35S A105E E154G F167E",4
"lib1","SARS-CoV-2","ATCTATCTATAACATT",5,26.36,8.69,-2.08,0.32,1.5,1,0.05,">1 nonsynonymous","S41F N58I P96L",3
"lib1","SARS-CoV-2","ATCTATCTTCCCACAA",4,98.26,10.76,-0.01,0.06,2.86,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTATGATAACGTAT",2,16.85,6,-4.76,2,3,1.5,0.02,">1 nonsynonymous","A22I V65E",2
"lib1","SARS-CoV-2","ATCTATGCAAACCAAG",2,41.92,9.78,-0.98,0.13,2.07,1.07,0.01,">1 nonsynonymous","Y35T F134A T140V",3
"lib1","SARS-CoV-2","ATCTATGCGGCCAACA",1,36.79,8.51,-2.26,0.13,2.28,1.13,0,">1 nonsynonymous","S69R F126I",2
"lib1","SARS-CoV-2","ATCTATGCTAATTAAT",2,7.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D90W W106I",2
"lib1","SARS-CoV-2","ATCTATGCTACTCGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","ATCTATGTAAACACGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1K S69V T100S R124*",4
"lib1","SARS-CoV-2","ATCTATGTCAAACCGC",4,48.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64S S113P P133S",3
"lib1","SARS-CoV-2","ATCTATTAAACTTAAA",2,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T Y50L D98A I104T Y123K Y143C",6
"lib1","SARS-CoV-2","ATCTATTACAATATAT",4,8.02,10.13,-0.63,0.06,2.94,1,0,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","ATCTATTATACCAAAT",14,78.13,6.34,-4.42,0.43,1.5,1.15,0.01,">1 nonsynonymous","I88N V173L",2
"lib1","SARS-CoV-2","ATCTATTCAAATGAAA",5,1,NA,NA,NA,NA,NA,NA,"stop","N64D E141*",2
"lib1","SARS-CoV-2","ATCTATTCACACCTAT",1,15.96,10.83,0.07,0.11,2.89,1.03,0.01,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","ATCTATTGCCAATCTA",1,0.66,NA,NA,NA,NA,NA,NA,"stop","F8K K128* F167V",3
"lib1","SARS-CoV-2","ATCTATTGTTGACTCT",5,8.2,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F44L P82Q",2
"lib1","SARS-CoV-2","ATCTATTTCACTATTT",6,16.33,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D34E S43L Y50L K198F",4
"lib1","SARS-CoV-2","ATCTCAAACCTCAGAA",5,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66N I104N L183D",3
"lib1","SARS-CoV-2","ATCTCAAAGGTGTCCT",21,44.85,10.75,-0.01,0.09,2.79,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTCAACGACTGTAT",8,132.23,9.67,-1.1,0.1,1.81,1.07,0,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","ATCTCAACTGCAGCCA",6,0.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCAAGTAAGACAT",1,40.49,10.71,-0.05,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCAATACTCCGTA",4,46.26,10.28,-0.48,0.09,2.69,1,0,">1 nonsynonymous","N13G V173G",2
"lib1","SARS-CoV-2","ATCTCAATATTCCTGG",1,36.97,7.03,-3.73,0.43,1.5,1.08,0.04,">1 nonsynonymous","S19W V37D S139L",3
"lib1","SARS-CoV-2","ATCTCACAAAATACAA",3,28.24,6,-4.76,2,3,1.34,0.02,">1 nonsynonymous","A81M I88V F99L G117S V173M",5
"lib1","SARS-CoV-2","ATCTCACAGCCTGTAA",2,8.66,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","Y35C E76K V103I",3
"lib1","SARS-CoV-2","ATCTCACAGGATCTAT",3,68.98,10.16,-0.6,0.06,2.73,1.03,0,">1 nonsynonymous","E10D D34F K56D",3
"lib1","SARS-CoV-2","ATCTCACATTCTCCCG",6,4.9,NA,NA,NA,NA,NA,NA,"stop","G86S D97L E141*",3
"lib1","SARS-CoV-2","ATCTCACCCGCATTTG",1,10.37,NA,NA,NA,NA,NA,0.09,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCACCGCTTCTAG",2,8.77,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S29A V103L R179I",3
"lib1","SARS-CoV-2","ATCTCACCTTTGAGAA",2,13.46,6.2,-4.56,0.59,1.5,1.11,0.01,">1 nonsynonymous","E10G D68Q",2
"lib1","SARS-CoV-2","ATCTCACGGCGTCTTC",4,20.32,8.69,-2.07,0.27,1.5,1.19,0.03,"1 nonsynonymous","F134P",1
"lib1","SARS-CoV-2","ATCTCACGTCCAAGAA",3,53.36,6.56,-4.2,0.45,1.5,1.14,0.02,">1 nonsynonymous","I28E Y143V",2
"lib1","SARS-CoV-2","ATCTCACGTTATCGGT",1,35.78,10.54,-0.22,0.04,2.89,1.04,0,"1 nonsynonymous","F44M",1
"lib1","SARS-CoV-2","ATCTCACTTGCATGGT",4,40.44,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I88Y K132V T170S",3
"lib1","SARS-CoV-2","ATCTCACTTTGAGATT",3,115.36,10.33,-0.43,0.05,2.85,1.06,0,"1 nonsynonymous","D34C",1
"lib1","SARS-CoV-2","ATCTCAGAGTGAGAAA",5,39.92,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I2P G9I L38D K114R R127T",5
"lib1","SARS-CoV-2","ATCTCAGATCCCCGAA",7,62.94,6.04,-4.72,0.53,1.5,1.13,0.01,">1 nonsynonymous","V71G K114M Y143T V173S",4
"lib1","SARS-CoV-2","ATCTCAGGAGATACGC",5,77.52,6,-4.76,1.4,1.5,1.25,0.02,">1 nonsynonymous","T3M G9M D112N Y119K E141L",5
"lib1","SARS-CoV-2","ATCTCAGTAATCCGTA",1,29.43,10.61,-0.15,0.05,2.86,1.08,0,"1 nonsynonymous","Q144M",1
"lib1","SARS-CoV-2","ATCTCAGTTTTAAACT",4,53.64,10.84,0.08,0.08,2.84,1.07,0,">1 nonsynonymous","Y50W T140A",2
"lib1","SARS-CoV-2","ATCTCATAAGTAATTT",1,19.68,9.8,-0.96,0.21,2.6,1.18,0.02,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","ATCTCATACTAAGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14H Y35H A42T G83V K114* G166S F167A P197D",8
"lib1","SARS-CoV-2","ATCTCATATTAGAGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8* F44R N64R",3
"lib1","SARS-CoV-2","ATCTCATCAAAACTGA",3,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V S41N D90L F167A K198E",5
"lib1","SARS-CoV-2","ATCTCATCTAATCGTT",1,10.87,9.46,-1.3,0.17,2.44,1.27,0.01,"1 nonsynonymous","G146E",1
"lib1","SARS-CoV-2","ATCTCATTCAAACTAA",1,9.43,10.83,0.06,0.07,2.97,1,0,">1 nonsynonymous","R16Y F160L",2
"lib1","SARS-CoV-2","ATCTCCACAGATCAAC",7,115.31,10.75,-0.02,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTCCACGTATTCTA",2,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K C102R K114R",3
"lib1","SARS-CoV-2","ATCTCCACGTTCTATA",4,18.7,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S41C D59P F99N L122G S139A F167S",6
"lib1","SARS-CoV-2","ATCTCCATCAATGACG",1,10.23,10.29,-0.47,0.15,2.82,1,0.01,">1 nonsynonymous","C61L E141W",2
"lib1","SARS-CoV-2","ATCTCCATGGATTAAA",3,78.72,9.89,-0.88,0.09,1.96,1.1,0,">1 nonsynonymous","D98W S184K",2
"lib1","SARS-CoV-2","ATCTCCCAACACATCT",7,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G V103Y N107C G146A S200W",5
"lib1","SARS-CoV-2","ATCTCCCAAGCGAGAC",18,2024.08,8.94,-1.82,0.09,2.12,1.1,0,">1 nonsynonymous","A14T D59C A67V K87S H189R",5
"lib1","SARS-CoV-2","ATCTCCCACTTGGCTA",2,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W S41V C49N L57R Y66H Y91D Y175Q L183P",8
"lib1","SARS-CoV-2","ATCTCCCAGGCTTTCA",4,145.97,9.66,-1.1,0.1,2.46,1.1,0,">1 nonsynonymous","C61L K128C Q144N",3
"lib1","SARS-CoV-2","ATCTCCCCTATCAGTA",11,0.4,NA,NA,NA,NA,NA,NA,"stop","S29* G86* P161Y",3
"lib1","SARS-CoV-2","ATCTCCCTATAAACAG",4,25.01,7.45,-3.31,0.28,1.5,1.05,0.03,">1 nonsynonymous","D34R T46C T63E S129Y",4
"lib1","SARS-CoV-2","ATCTCCCTTGGTGTGA",3,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C T15Q C49Q Y119I S129H",5
"lib1","SARS-CoV-2","ATCTCCGAACATCAAA",1,15.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N4K A89R N107Q V153T",4
"lib1","SARS-CoV-2","ATCTCCGATATCTAGT",2,155.04,10.76,-0.01,0.06,2.91,1.05,0,">1 nonsynonymous","S43A D59Y",2
"lib1","SARS-CoV-2","ATCTCCGCGGAGCTAA",3,23.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N107H A145F C150Y G155R",4
"lib1","SARS-CoV-2","ATCTCCGCTACCGTGC",20,793.25,10.17,-0.59,0.03,2.88,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","ATCTCCGGAACATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* V32K L60I I88W F160L Y175L",6
"lib1","SARS-CoV-2","ATCTCCGGATGCCACA",3,33.45,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","G9L C49V F99V",3
"lib1","SARS-CoV-2","ATCTCCGGCGGCTAAA",1,57.63,10.75,-0.01,0.07,2.88,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTCCTCTTGACTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","W106R V153E F167*",3
"lib1","SARS-CoV-2","ATCTCCTGCGTCCCAG",9,21.45,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","S19N Q84L D137P",3
"lib1","SARS-CoV-2","ATCTCGAACCACACCA",5,74.75,9.62,-1.14,0.06,2.77,1.09,0,">1 nonsynonymous","A145L T201W",2
"lib1","SARS-CoV-2","ATCTCGAGCCCAACGG",10,135.83,10.56,-0.21,0.06,2.9,1.06,0,">1 nonsynonymous","G174A T201R",2
"lib1","SARS-CoV-2","ATCTCGCACCAGGATA",6,67.65,10.74,-0.03,0.09,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCGCCCATTCACC",1,11.11,10.39,-0.37,0.08,2.79,1.03,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","ATCTCGCTTTGCACGG",4,0.49,NA,NA,NA,NA,NA,NA,"stop","C49* K56L I88R Q144I H189L",5
"lib1","SARS-CoV-2","ATCTCGGATACTATGT",4,81.22,10.69,-0.08,0.05,2.93,1.04,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","ATCTCGGTGCTCATCG",5,79.24,10.39,-0.38,0.04,2.86,1.03,0,">1 nonsynonymous","A33S P149L",2
"lib1","SARS-CoV-2","ATCTCGTAAAATCAGG",6,53.32,10.55,-0.22,0.07,2.85,1.07,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","ATCTCGTAAGTAGTCA",3,65.75,9.52,-1.24,0.06,2.72,1.11,0,"1 nonsynonymous","G74Y",1
"lib1","SARS-CoV-2","ATCTCGTAATAAACAC",2,58.65,7.67,-3.09,0.14,1.75,1.13,0.01,"1 nonsynonymous","D112N",1
"lib1","SARS-CoV-2","ATCTCGTACAAATAAC",10,7.44,6,-4.76,2,3,1.41,0.02,">1 nonsynonymous","C31T L57E D112Y F156S L183P",5
"lib1","SARS-CoV-2","ATCTCGTAGGCAGGAT",4,73.54,7.22,-3.54,0.26,1.5,1.13,0.02,">1 nonsynonymous","P7A S43P K94D",3
"lib1","SARS-CoV-2","ATCTCGTGAGAGTTTG",2,52.52,10.63,-0.14,0.06,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCTACCAACACAT",3,46.95,10.75,-0.02,0.08,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCTAGAATGTGCA",6,55.1,10.79,0.03,0.05,2.95,1.02,0,">1 nonsynonymous","V37W F44M L122M",3
"lib1","SARS-CoV-2","ATCTCTAGGAACTTAC",6,23.66,6,-4.76,2,1.5,1.24,0,">1 nonsynonymous","F44I D68L K128E T170W V173T K199N",6
"lib1","SARS-CoV-2","ATCTCTATCATACGGT",5,2.13,NA,NA,NA,NA,NA,NA,"stop","A14K Q144S F156P Y178*",4
"lib1","SARS-CoV-2","ATCTCTATGATCACCG",5,19.35,6,-4.76,1.07,3,1.26,0.01,">1 nonsynonymous","F134V T140I L183S",3
"lib1","SARS-CoV-2","ATCTCTCAACTTACAG",2,45.86,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F70V G152N",2
"lib1","SARS-CoV-2","ATCTCTCACTTGTTAC",6,39.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A C61I K128A",3
"lib1","SARS-CoV-2","ATCTCTCTATTACCTT",1,40.31,7.55,-3.22,0.17,1.5,1.13,0.01,">1 nonsynonymous","S108E K128C F160K",3
"lib1","SARS-CoV-2","ATCTCTGACCTCTCAA",6,39.81,10.73,-0.03,0.06,2.96,1,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","ATCTCTGAGAAGATAT",2,81.64,10.04,-0.73,0.04,2.85,1,0,">1 nonsynonymous","C6Y T15S",2
"lib1","SARS-CoV-2","ATCTCTTAAAGCGTAT",8,1.46,NA,NA,NA,NA,NA,NA,"stop","G86R N118R F156* Q176*",4
"lib1","SARS-CoV-2","ATCTCTTAAGTAGCCG",3,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E G155P Q163P",3
"lib1","SARS-CoV-2","ATCTCTTATCAAAACC",2,21.22,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88Y W106Y Y121E",3
"lib1","SARS-CoV-2","ATCTCTTGGAACAACC",5,192.05,9.22,-1.54,0.06,2.78,1.08,0,">1 nonsynonymous","P149T E154F",2
"lib1","SARS-CoV-2","ATCTCTTTAACAAACC",10,232.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86C P169V Y178T V181M",4
"lib1","SARS-CoV-2","ATCTCTTTAACGTTAA",3,69.19,10.82,0.05,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTCTTTACAAATAG",11,40.18,7.05,-3.71,0.32,1.5,1.17,0.03,">1 nonsynonymous","T55L T85R D112M S139A",4
"lib1","SARS-CoV-2","ATCTCTTTGATAAAGA",4,33.44,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N107T D137R G155L S184I",4
"lib1","SARS-CoV-2","ATCTGAAAAGTTAAAT",3,8.59,6,-4.76,2,1.5,1.42,0.07,">1 nonsynonymous","T15M I88E D98L",3
"lib1","SARS-CoV-2","ATCTGAAAATCCTACC",3,309.08,10.78,0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTGAAACAGCCCAA",7,48.83,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6L N107K G155P",3
"lib1","SARS-CoV-2","ATCTGAAAGTCCTAGT",9,144.35,8.89,-1.87,0.07,2.7,1.16,0,">1 nonsynonymous","N109Y F160V",2
"lib1","SARS-CoV-2","ATCTGAAAGTTAAAGC",2,28.83,10.83,0.07,0.06,2.97,1,0,">1 nonsynonymous","L5S C61M N110K",3
"lib1","SARS-CoV-2","ATCTGAAATACAAAAC",4,44.67,9.33,-1.43,0.11,2.32,1.09,0,">1 nonsynonymous","I2T N107S E141H E154I",4
"lib1","SARS-CoV-2","ATCTGAAATACATATA",4,21.06,7.09,-3.67,0.53,1.51,1.2,0.05,">1 nonsynonymous","V20R T140R A145L N171Y",4
"lib1","SARS-CoV-2","ATCTGAACACGCCGTA",2,37.54,10.86,0.09,0.12,2.83,1.04,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","ATCTGAAGATTATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10I F44* F99R Y123S D137V G152S L183S",7
"lib1","SARS-CoV-2","ATCTGAAGCTGAGGGG",5,52.82,7.13,-3.63,0.27,1.5,1.22,0.02,">1 nonsynonymous","R127W N171T",2
"lib1","SARS-CoV-2","ATCTGAATAATAAGTG",7,73.37,10.76,-0.01,0.06,2.97,1.03,0,"1 nonsynonymous","S36T",1
"lib1","SARS-CoV-2","ATCTGAATCGAAATTA",8,1.31,NA,NA,NA,NA,NA,NA,"stop","N92W Y121L P177*",3
"lib1","SARS-CoV-2","ATCTGAATTTCGGAAA",5,34.54,6,-4.76,1.83,1.5,1.16,0.01,">1 nonsynonymous","A81T F126R Y143R",3
"lib1","SARS-CoV-2","ATCTGACAACCCACGC",1,0.28,NA,NA,NA,NA,NA,NA,"stop","Q84* Y143K G174S",3
"lib1","SARS-CoV-2","ATCTGACACCTAAAAG",9,24.96,6,-4.76,1.52,3,1.25,0.01,">1 nonsynonymous","A18T A42C L162N T170M A190S",5
"lib1","SARS-CoV-2","ATCTGACAGAGTATAG",2,47.17,10.87,0.1,0.08,2.9,1.07,0,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","ATCTGACCAATTATCC",5,89.73,10.64,-0.13,0.08,2.83,1.06,0,">1 nonsynonymous","I28M P149W T201R",3
"lib1","SARS-CoV-2","ATCTGACCGTATAAAA",1,8.17,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I2A V11H S36C T100Y C158S",5
"lib1","SARS-CoV-2","ATCTGACCTCACCAAA",8,32.82,6.44,-4.33,0.8,1.5,1.12,0.06,">1 nonsynonymous","F70P G101N",2
"lib1","SARS-CoV-2","ATCTGACGACATATGG",7,0.15,NA,NA,NA,NA,NA,NA,"stop","R16Q K48G T55P D98* N107M P161G",6
"lib1","SARS-CoV-2","ATCTGACGCAGTCCAT",1,13.72,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N107C N118W L131M T201Q",4
"lib1","SARS-CoV-2","ATCTGAGAATATTCGT",3,39.12,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94E F160M G166R",3
"lib1","SARS-CoV-2","ATCTGAGCAGATAATG",1,44.17,10.84,0.08,0.05,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTGAGCCAATTATA",3,34.61,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","I28V F44Y D90P",3
"lib1","SARS-CoV-2","ATCTGAGCCGCTTTGG",8,211.41,10.76,0,0.03,2.97,1.01,0,">1 nonsynonymous","V153D T201K",2
"lib1","SARS-CoV-2","ATCTGAGTTAAGTAAT",3,49.48,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","F70V T201K",2
"lib1","SARS-CoV-2","ATCTGAGTTCGGCACT",2,5.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S N13K F156R",3
"lib1","SARS-CoV-2","ATCTGAGTTGTCGTAG",1,41.29,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35D F62V L95F A105N C150L G155N S164F",7
"lib1","SARS-CoV-2","ATCTGATAAAATACTT",4,2.99,NA,NA,NA,NA,NA,NA,"stop","T3M Y39P Q163*",3
"lib1","SARS-CoV-2","ATCTGATAAAGGGCCG",5,1.2,NA,NA,NA,NA,NA,NA,"stop","G9L Y91* I138N F160Q",4
"lib1","SARS-CoV-2","ATCTGATACCTCTTCC",8,165.29,9.52,-1.25,0.11,2.46,1.08,0,">1 nonsynonymous","C6A K26R N64R R78A P149R",5
"lib1","SARS-CoV-2","ATCTGATACTCATAGC",2,14.88,10.26,-0.5,0.47,1.5,1,0.07,">1 nonsynonymous","N58T Q79R T148G Q168W",4
"lib1","SARS-CoV-2","ATCTGATAGCGTTAAA",8,6.44,NA,NA,NA,NA,NA,NA,"stop","Y35L V77G P149E P169G V173* T201R",6
"lib1","SARS-CoV-2","ATCTGATCATTATGGT",4,66.1,9.15,-1.61,0.17,1.5,1.04,0.01,"1 nonsynonymous","Y21G",1
"lib1","SARS-CoV-2","ATCTGATCTACACATA",3,24.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G101N G146S G152Q",3
"lib1","SARS-CoV-2","ATCTGATCTAGACACT",2,32.48,8.82,-1.94,0.32,1.5,1.02,0.04,">1 nonsynonymous","N58L D112V",2
"lib1","SARS-CoV-2","ATCTGATGACACACAA",1,9.38,10.45,-0.32,0.08,3,1.01,0,">1 nonsynonymous","C6Y Y35L P54H D59E",4
"lib1","SARS-CoV-2","ATCTGATGACTTCATT",3,18.03,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N13R G86D T140K F167I T201N",5
"lib1","SARS-CoV-2","ATCTGATGCATGCCAA",5,22.42,10.71,-0.05,0.06,2.98,1.02,0,">1 nonsynonymous","C61T L122I",2
"lib1","SARS-CoV-2","ATCTGATTCACTAGGA",1,31.32,10.62,-0.14,0.13,2.86,1.07,0.01,">1 nonsynonymous","V37Q L187V",2
"lib1","SARS-CoV-2","ATCTGATTTATTAAGA",2,30.46,6.8,-3.97,0.61,1.5,1.27,0.05,">1 nonsynonymous","F47T E141M P161V",3
"lib1","SARS-CoV-2","ATCTGCAAACAACACT",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V V77Q I88Q",3
"lib1","SARS-CoV-2","ATCTGCAAACATTAAT",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y A89V N92L",3
"lib1","SARS-CoV-2","ATCTGCAAGCTCGAGC",3,31.14,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C6V C61I R127W K199M",4
"lib1","SARS-CoV-2","ATCTGCAATAAGTCGA",3,107.92,10.13,-0.63,0.06,2.94,1,0,">1 nonsynonymous","D59Q F156S",2
"lib1","SARS-CoV-2","ATCTGCACAACAATCC",3,94.21,10.7,-0.06,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTGCACAGTAAACA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","F44P N151* C195I",3
"lib1","SARS-CoV-2","ATCTGCCACACTTTCA",3,6.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q D98R E141R",3
"lib1","SARS-CoV-2","ATCTGCCCAAGTTACG",6,144.94,10.71,-0.05,0.06,2.86,1.1,0,"1 nonsynonymous","V173N",1
"lib1","SARS-CoV-2","ATCTGCCCAATAAACA",6,30.14,10.86,0.1,0.11,2.83,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCTGCCCCAAATAGA",4,87.13,8.89,-1.88,0.07,2.56,1.13,0,">1 nonsynonymous","D34N L60N K87D",3
"lib1","SARS-CoV-2","ATCTGCCCCAACTTAA",1,12.78,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S43K K56Y G101A E141S",4
"lib1","SARS-CoV-2","ATCTGCCCGATCATTG",4,103.59,10.61,-0.15,0.05,2.92,1.03,0,"1 nonsynonymous","I138H",1
"lib1","SARS-CoV-2","ATCTGCCCGGCACAAC",4,99.52,9.15,-1.61,0.12,2.3,1.14,0.01,">1 nonsynonymous","Y91H P169L",2
"lib1","SARS-CoV-2","ATCTGCCCTACGACGC",5,45.68,10.75,-0.01,0.05,2.92,1.04,0,">1 nonsynonymous","G9D L60F",2
"lib1","SARS-CoV-2","ATCTGCCGACGGCGAC",1,22.41,10.73,-0.04,0.08,2.92,1.03,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","ATCTGCCGCTTCAGGA",2,7.45,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","Y66W K87R L95P L131T E141S S184P",6
"lib1","SARS-CoV-2","ATCTGCCGTCGTATAA",1,35.94,6.1,-4.67,1.1,1.5,1.23,0.02,">1 nonsynonymous","Y121C Y159S",2
"lib1","SARS-CoV-2","ATCTGCCTATTACGGC",3,29.83,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R73T P161L",2
"lib1","SARS-CoV-2","ATCTGCCTTAAGTATA",2,15.75,8.51,-2.25,0.25,1.5,1.4,0.03,">1 nonsynonymous","L60M D90N P96A E141Q S164W",5
"lib1","SARS-CoV-2","ATCTGCGACGTATTCA",1,6.47,10.69,-0.07,0.25,2.79,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATCTGCGCAACGGCAA",6,74.18,10.7,-0.07,0.05,2.86,1.07,0,"1 nonsynonymous","P54N",1
"lib1","SARS-CoV-2","ATCTGCGCGAATTTAG",2,9.06,10.67,-0.1,0.07,2.99,1.02,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","ATCTGCGGGATGCTTG",4,92.99,8.49,-2.28,0.12,2.8,1.08,0.01,">1 nonsynonymous","L60M A81G F156N T170M",4
"lib1","SARS-CoV-2","ATCTGCGTACTAAAAA",2,240.88,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3F T55V N157T F167T",4
"lib1","SARS-CoV-2","ATCTGCTAAAATGGAA",2,12.45,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A18I F47G L60S R78S L95P N157K",6
"lib1","SARS-CoV-2","ATCTGCTATTAAGTCT",15,334.9,10.41,-0.36,0.03,2.92,1.03,0,"1 nonsynonymous","Y35P",1
"lib1","SARS-CoV-2","ATCTGCTCGGTCATCT",1,5.61,6,-4.76,2,3,1.05,0,">1 nonsynonymous","S41K V181H",2
"lib1","SARS-CoV-2","ATCTGCTTCGCAACCC",3,41.84,10.62,-0.14,0.08,2.83,1.05,0,">1 nonsynonymous","K87L S164N",2
"lib1","SARS-CoV-2","ATCTGGAAAAAAGTTT",18,319.36,9.85,-0.91,0.08,2.41,1.04,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","ATCTGGAAGTATTAAT",2,7.54,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","A33L K94E K199E",3
"lib1","SARS-CoV-2","ATCTGGACATTTTCAA",1,20.84,8.69,-2.07,0.15,1.5,1.07,0.01,">1 nonsynonymous","K94I L122W",2
"lib1","SARS-CoV-2","ATCTGGCCAGAAAATC",7,81.54,6,-4.76,1.75,1.5,1.2,0.01,">1 nonsynonymous","N40L P54E Y66T R124Q N157I",5
"lib1","SARS-CoV-2","ATCTGGCCTATTGGTA",3,40.1,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C31G L60R V173S K199V",4
"lib1","SARS-CoV-2","ATCTGGGAGCAGTGCC",1,24.03,6,-4.76,2,1.5,1.38,0.05,">1 nonsynonymous","E10Y C49W Y123K Q176R",4
"lib1","SARS-CoV-2","ATCTGGGCTAGAACGG",5,10.1,7.07,-3.69,0.72,3,1.08,0.08,">1 nonsynonymous","F47I Y91G T100S P133K",4
"lib1","SARS-CoV-2","ATCTGGGTTGTTTAAG",8,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H C61L D112M E154F",4
"lib1","SARS-CoV-2","ATCTGGTAAAACAACG",3,16.96,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","R78D D90K G101A L122I G174A",5
"lib1","SARS-CoV-2","ATCTGGTAAAGAACAG",1,7.06,9.7,-1.07,0.13,2.56,1.11,0.01,">1 nonsynonymous","C6G D98R",2
"lib1","SARS-CoV-2","ATCTGGTATGATTAGT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","C6K L38K L57F K87H I104* V173Q",6
"lib1","SARS-CoV-2","ATCTGGTGGTAATTCT",2,17.51,9.83,-0.94,0.1,2.77,1.05,0,">1 nonsynonymous","F62L Q84T L125V",3
"lib1","SARS-CoV-2","ATCTGTAAGTATTACG",5,87.48,9.93,-0.84,0.11,2.27,1.04,0.01,">1 nonsynonymous","K26R P96L P197S",3
"lib1","SARS-CoV-2","ATCTGTACACTCAAAT",2,25.41,9.45,-1.32,0.36,1.5,1,0.07,">1 nonsynonymous","V11T D90S W106F S147Y",4
"lib1","SARS-CoV-2","ATCTGTACCCGTATAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y T100Y P197I",3
"lib1","SARS-CoV-2","ATCTGTATACCAACTT",12,143.41,10.73,-0.03,0.05,2.92,1.05,0,"1 nonsynonymous","Q84T",1
"lib1","SARS-CoV-2","ATCTGTATACTTTACG",1,11.26,7.48,-3.29,0.53,1.5,1.09,0.01,">1 nonsynonymous","C49P V77I S184C",3
"lib1","SARS-CoV-2","ATCTGTATATCCCCCG",6,50.53,8.86,-1.9,0.27,1.5,1.04,0.03,">1 nonsynonymous","T55F F99L V115L K128L",4
"lib1","SARS-CoV-2","ATCTGTATCTAACATG",6,92.23,7.51,-3.25,0.25,1.5,1.17,0.02,">1 nonsynonymous","N40T A105L G174A",3
"lib1","SARS-CoV-2","ATCTGTATGACACAGA",5,154.69,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y159V Y175S",2
"lib1","SARS-CoV-2","ATCTGTATTAATGAAA",5,49.33,10.71,-0.05,0.05,2.96,1.02,0,"1 nonsynonymous","T85Q",1
"lib1","SARS-CoV-2","ATCTGTCAATACTATA",4,53.13,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C6E D90G Y119F",3
"lib1","SARS-CoV-2","ATCTGTCCAAGGCTAG",10,269.77,9.29,-1.48,0.04,2.79,1.13,0,">1 nonsynonymous","C6S F126H",2
"lib1","SARS-CoV-2","ATCTGTCGAGGCGTAG",5,64.71,10.78,0.02,0.04,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTGTCTTACGGAGT",2,31.8,10.47,-0.3,0.08,2.97,1,0,">1 nonsynonymous","S41K G196V",2
"lib1","SARS-CoV-2","ATCTGTCTTATTTATT",1,37.86,10.68,-0.08,0.07,2.88,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATCTGTGAAGTCCTTG",2,16.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31S G86V N107L",3
"lib1","SARS-CoV-2","ATCTGTGACTGTGGAA",4,64.32,10.64,-0.12,0.04,2.93,1.01,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","ATCTGTGATGTCGAAC",2,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M S129L G152L",3
"lib1","SARS-CoV-2","ATCTGTGCAACTCAAA",3,5.91,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y121I C150K F156I F167L L188Y",5
"lib1","SARS-CoV-2","ATCTGTGTCACCTACG",3,5.64,8.76,-2,0.32,1.5,1.07,0.03,">1 nonsynonymous","C6G A18R S29W",3
"lib1","SARS-CoV-2","ATCTGTGTGATCCATG",1,2.74,NA,NA,NA,NA,NA,NA,"stop","A18E I88* N118G P149*",4
"lib1","SARS-CoV-2","ATCTGTTAAGTATCAT",8,75.22,9.52,-1.24,0.08,2.82,1.09,0,">1 nonsynonymous","S113T L122W",2
"lib1","SARS-CoV-2","ATCTGTTACCCCGTAT",9,59.78,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45V P149A P169L G174V",4
"lib1","SARS-CoV-2","ATCTGTTATCTGTAAT",6,140.87,10.13,-0.64,0.04,2.88,1,0,">1 nonsynonymous","Y121V K199Y",2
"lib1","SARS-CoV-2","ATCTGTTGAAAGTGTA",15,1.01,NA,NA,NA,NA,NA,NA,"stop","C6* A42R N92M S129K",4
"lib1","SARS-CoV-2","ATCTGTTTACCATTAT",1,20.9,6.01,-4.75,1.62,1.5,1.26,0.03,">1 nonsynonymous","V11R I88F W106V D112L N118H A145C V173C",7
"lib1","SARS-CoV-2","ATCTTAAAAGACGAAA",2,27.58,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I88M R124S V173N",3
"lib1","SARS-CoV-2","ATCTTAAACGCATAGG",4,60.58,10.71,-0.06,0.08,2.88,1.06,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","ATCTTAAACTATTACC",2,127.87,10.08,-0.68,0.06,2.78,1.02,0,">1 nonsynonymous","P133S F156W A192I",3
"lib1","SARS-CoV-2","ATCTTAAATCGACAGG",11,96.41,10.47,-0.29,0.04,2.87,1.06,0,">1 nonsynonymous","S41C R78V S129G",3
"lib1","SARS-CoV-2","ATCTTAAATGAACAGA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70I",1
"lib1","SARS-CoV-2","ATCTTAAATTAGCGAG",2,24.3,10.93,0.17,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTAAATTGCCACA",2,16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V F99G",2
"lib1","SARS-CoV-2","ATCTTAACCATCCTAG",7,60.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K T55L P82L N107S",4
"lib1","SARS-CoV-2","ATCTTAACGGATATAA",1,25.86,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F44V Q163M V180S",3
"lib1","SARS-CoV-2","ATCTTAACTCAATATA",5,16.54,8.98,-1.79,0.22,1.72,1.25,0.02,">1 nonsynonymous","T15S S41E D59A A67Y",4
"lib1","SARS-CoV-2","ATCTTAAGACTAAAAC",2,92.26,10.77,0.01,0.05,2.85,1.04,0,">1 nonsynonymous","K128Q T201M",2
"lib1","SARS-CoV-2","ATCTTAAGCACCCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11H L60S S139Y P149E F156* Y175V H189N",7
"lib1","SARS-CoV-2","ATCTTAAGCATAAATA",13,97.07,10.79,0.03,0.07,2.83,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTAATCTGCCATA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3Y Y66* P133R",3
"lib1","SARS-CoV-2","ATCTTAATTGTTCTAA",5,50.46,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F99M I104H F156K Q163T",4
"lib1","SARS-CoV-2","ATCTTAATTTACTACT",1,6.71,10.3,-0.46,0.45,1.5,1,0.08,">1 nonsynonymous","F99L N107K",2
"lib1","SARS-CoV-2","ATCTTACAAAAAGCCC",10,56,6,-4.76,1.52,1.5,1.16,0.03,">1 nonsynonymous","L5H N58S V71W L95V T201L",5
"lib1","SARS-CoV-2","ATCTTACAACGCATCA",5,6.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3H L95S",2
"lib1","SARS-CoV-2","ATCTTACAAGGAACTA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","F70* S147F",2
"lib1","SARS-CoV-2","ATCTTACACATTAATG",3,27.75,6,-4.76,2,1.95,1.15,0,">1 nonsynonymous","F8K G174V",2
"lib1","SARS-CoV-2","ATCTTACACTATTGTT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","Y35L L131P P197*",3
"lib1","SARS-CoV-2","ATCTTACAGCCGCGAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Y35* P133G",2
"lib1","SARS-CoV-2","ATCTTACATGATTCGG",1,13.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A A89R F167L",3
"lib1","SARS-CoV-2","ATCTTACATTCGCACG",2,29.15,10.51,-0.26,0.09,2.8,1.09,0,">1 nonsynonymous","R16L K198P",2
"lib1","SARS-CoV-2","ATCTTACCCTAGAATA",2,1.32,NA,NA,NA,NA,NA,NA,"stop","I28L S69M G146V Q176C V180*",5
"lib1","SARS-CoV-2","ATCTTACGCTATATAT",1,10.17,9.22,-1.54,0.08,3,1.04,0,">1 nonsynonymous","T100M G166R",2
"lib1","SARS-CoV-2","ATCTTACGGATGCGCA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","N1I V37R K48A K56* Y121N L162Q",6
"lib1","SARS-CoV-2","ATCTTACGTATATGTG",2,44.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11T C150M",2
"lib1","SARS-CoV-2","ATCTTACTGAGAAAAA",2,5.94,NA,NA,NA,NA,NA,NA,"stop","I28T F156* Q168S",3
"lib1","SARS-CoV-2","ATCTTACTTCAGGGGA",13,3.78,NA,NA,NA,NA,NA,NA,"stop","I2K Y39* F47T V77T",4
"lib1","SARS-CoV-2","ATCTTAGACATCACAA",2,20.04,10.11,-0.65,0.13,2.12,1.04,0.01,">1 nonsynonymous","C61M D98I F134M",3
"lib1","SARS-CoV-2","ATCTTAGACGTCAGGC",7,17.73,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99P S129G",2
"lib1","SARS-CoV-2","ATCTTAGCATTTGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A18S K56R N109* E135C N151C Y178D",6
"lib1","SARS-CoV-2","ATCTTAGGTTACTTAT",8,58.6,10.41,-0.36,0.08,2.93,1.02,0,"1 nonsynonymous","G155N",1
"lib1","SARS-CoV-2","ATCTTATATGAGTACC",4,17.1,6.19,-4.57,0.71,1.5,1.12,0.02,">1 nonsynonymous","S69I A81S N130M E154V",4
"lib1","SARS-CoV-2","ATCTTATGACACAATG",6,42.5,8.79,-1.97,0.32,1.5,1,0.05,">1 nonsynonymous","V37R Y50R N110Y",3
"lib1","SARS-CoV-2","ATCTTATGCGCTACAA",2,13.17,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6Y D90S G146A C158V",4
"lib1","SARS-CoV-2","ATCTTATGTCCAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33K S45C D97S Y119M S129*",5
"lib1","SARS-CoV-2","ATCTTATTGAGCGTGT",1,45.41,10.11,-0.66,0.06,2.9,1,0,">1 nonsynonymous","F44S C61Y",2
"lib1","SARS-CoV-2","ATCTTATTGGTCCCCA",5,24.48,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","Y35M L60K D98L Y121N R136Y F160M",6
"lib1","SARS-CoV-2","ATCTTATTTCAATCAA",3,11.52,9.39,-1.38,0.3,1.99,1.11,0.04,">1 nonsynonymous","N13A Y91W E141K",3
"lib1","SARS-CoV-2","ATCTTCAAAGATTCTA",4,3.58,NA,NA,NA,NA,NA,NA,"stop","P7* V37S S43F E76R",4
"lib1","SARS-CoV-2","ATCTTCAACAAAAATT",3,1.89,NA,NA,NA,NA,NA,NA,"stop","E10S C61* G86L W106*",4
"lib1","SARS-CoV-2","ATCTTCAATAAAGACT",2,45.06,10.72,-0.04,0.09,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTCAATAAATACT",6,88.46,10.63,-0.13,0.04,2.9,1.03,0,"1 nonsynonymous","S139H",1
"lib1","SARS-CoV-2","ATCTTCATAAATTCGA",5,119.63,10.43,-0.33,0.06,2.83,1.03,0,"1 nonsynonymous","F44R",1
"lib1","SARS-CoV-2","ATCTTCATCTCAACCG",4,114.27,10.65,-0.11,0.04,2.9,1.05,0,">1 nonsynonymous","I2S F134L",2
"lib1","SARS-CoV-2","ATCTTCATGAAAACTA",2,19.17,10.47,-0.29,0.07,2.95,1,0,"1 nonsynonymous","D59V",1
"lib1","SARS-CoV-2","ATCTTCATGAGACCCA",2,30.95,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","A14Y S36K N64T G86E Y159L",5
"lib1","SARS-CoV-2","ATCTTCCAACAACATG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","T63E S69* G86S L125E R179L",5
"lib1","SARS-CoV-2","ATCTTCCCATAATCGT",2,43.43,8,-2.76,0.27,1.65,1.14,0.03,">1 nonsynonymous","V77C F126Y T140V",3
"lib1","SARS-CoV-2","ATCTTCCCGCATTGGT",11,101.77,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S53V T85R C150D P161W",4
"lib1","SARS-CoV-2","ATCTTCCGATGGTGCC",3,69.98,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y35R F44P S69L L122I G146T T201Q",6
"lib1","SARS-CoV-2","ATCTTCCTCGAGCGAT",3,36.2,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K94R W106K S129C P149C G155N T170F",6
"lib1","SARS-CoV-2","ATCTTCCTCTGAATGT",2,48.8,10.77,0,0.09,2.87,1.08,0,"1 nonsynonymous","N4Q",1
"lib1","SARS-CoV-2","ATCTTCGATATGATCA",3,26.11,10.8,0.04,0.07,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTCGCCGTCAGCA",2,24.81,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","A14S A22H S45F Y119G Y123G V153K",6
"lib1","SARS-CoV-2","ATCTTCGGAATGATAT",5,67.94,10.29,-0.47,0.05,2.77,1.04,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","ATCTTCGGCAGTGTTA",1,0.61,NA,NA,NA,NA,NA,NA,"stop","V11* L38R",2
"lib1","SARS-CoV-2","ATCTTCGTCTGCCATT",9,61.56,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G83L L95P V173N",3
"lib1","SARS-CoV-2","ATCTTCGTCTTCAACT",4,44.4,10.83,0.06,0.04,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTCTAACGCAAAA",13,91.62,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G9S L95T G101E I142A",4
"lib1","SARS-CoV-2","ATCTTCTAGAATGCAT",6,28.38,7.77,-2.99,0.35,1.5,1.02,0.07,">1 nonsynonymous","A89Y I104Y N110R L131C",4
"lib1","SARS-CoV-2","ATCTTCTATGGATAAT",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L C49Y F99I Y143F Y165L T201R",6
"lib1","SARS-CoV-2","ATCTTCTGAAAAGATT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","T15L V77M Y121* V182Q T201R",5
"lib1","SARS-CoV-2","ATCTTCTTCCGATGAC",6,36.81,6.15,-4.61,0.45,1.5,1.12,0.01,">1 nonsynonymous","L5V S43I G86R A145E",4
"lib1","SARS-CoV-2","ATCTTGAACGACTGTG",4,30.75,7.91,-2.85,0.24,1.5,1.21,0.02,">1 nonsynonymous","S129L I142S P149Y",3
"lib1","SARS-CoV-2","ATCTTGAGACAACTAA",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L T100F G116S P149S L187K",5
"lib1","SARS-CoV-2","ATCTTGAGATGATAAT",8,29.36,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W106S G174M R179I",3
"lib1","SARS-CoV-2","ATCTTGAGCGGGATAA",2,50.31,10.25,-0.52,0.06,2.86,1.02,0,">1 nonsynonymous","Q79R N130R S147P",3
"lib1","SARS-CoV-2","ATCTTGAGTGAGTGGC",10,45.09,6.57,-4.2,0.44,1.5,1.24,0.02,">1 nonsynonymous","C49S K132G",2
"lib1","SARS-CoV-2","ATCTTGATAAGTTTGC",3,40.05,10.73,-0.03,0.05,2.92,1.05,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","ATCTTGATGATATTGT",5,41.42,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5N Y93W C158S",3
"lib1","SARS-CoV-2","ATCTTGATGCCGCTTT",5,274.16,9.29,-1.47,0.11,2.05,1.1,0,">1 nonsynonymous","Y39V N58T E141F G155H T201S",5
"lib1","SARS-CoV-2","ATCTTGATTGCCTACA",15,357.31,8.69,-2.08,0.09,2.63,1.1,0,">1 nonsynonymous","N24K F134R N157S",3
"lib1","SARS-CoV-2","ATCTTGCTATGCATTT",4,26.02,8.79,-1.98,0.37,1.5,1,0.08,">1 nonsynonymous","D68I E154P",2
"lib1","SARS-CoV-2","ATCTTGGAAGAAATAA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","G9* Y121L",2
"lib1","SARS-CoV-2","ATCTTGGACGAGAACA",3,14.29,10.82,0.05,0.11,2.87,1.04,0.01,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","ATCTTGGCGAGGACTA",2,26.12,6,-4.76,2,1.5,1.16,0.03,"1 nonsynonymous","I72Q",1
"lib1","SARS-CoV-2","ATCTTGGCGTCCAGAC",3,22.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91F P96T Y119F T140I G152I",5
"lib1","SARS-CoV-2","ATCTTGGTACCTCTAT",3,55.32,9.54,-1.22,0.11,2.23,1.04,0.01,">1 nonsynonymous","N107T A192S",2
"lib1","SARS-CoV-2","ATCTTGTCAAGCTTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5S P54W G83S V103* G174A",5
"lib1","SARS-CoV-2","ATCTTGTCATGTCTTG",5,406.34,8.07,-2.69,0.28,1.5,1.02,0.03,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","ATCTTGTCCATTCACA",6,74.64,6.7,-4.06,0.3,1.5,1.13,0.02,">1 nonsynonymous","C6L G51P",2
"lib1","SARS-CoV-2","ATCTTGTTAAATGCAG",5,3.54,NA,NA,NA,NA,NA,NA,"stop","E10V S19* D59H",3
"lib1","SARS-CoV-2","ATCTTTAAATACAAAC",5,0.1,NA,NA,NA,NA,NA,NA,"stop","A42R A81* V103M D112E",4
"lib1","SARS-CoV-2","ATCTTTAAGACCCCAT",1,23.03,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86L Y119V S200F",3
"lib1","SARS-CoV-2","ATCTTTAATCGAGAAG",2,25.36,10.84,0.08,0.13,2.72,1.01,0.01,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","ATCTTTACCTACAATT",5,23.02,6,-4.76,1.6,1.5,1.24,0.03,">1 nonsynonymous","N58S T63L I88L D98L",4
"lib1","SARS-CoV-2","ATCTTTAGATTCTTAT",1,85.7,10.29,-0.47,0.04,2.92,1.01,0,">1 nonsynonymous","T63W K199N",2
"lib1","SARS-CoV-2","ATCTTTAGCAACGCGG",10,139.17,10.52,-0.25,0.04,2.92,1.04,0,">1 nonsynonymous","S45K K56Q",2
"lib1","SARS-CoV-2","ATCTTTAGTACATTGC",1,17.92,10.63,-0.14,0.09,2.87,1.12,0,">1 nonsynonymous","A42R C61F",2
"lib1","SARS-CoV-2","ATCTTTATGCGTTGAT",1,11.59,9.28,-1.48,0.33,1.89,1.23,0.02,">1 nonsynonymous","Y50I C61G",2
"lib1","SARS-CoV-2","ATCTTTATGTGTAAAA",1,44.33,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","K94T G101L S139F F185C",4
"lib1","SARS-CoV-2","ATCTTTATTTAATATG",8,106.29,10.52,-0.24,0.04,2.92,1.03,0,"1 nonsynonymous","S184F",1
"lib1","SARS-CoV-2","ATCTTTCAAGTAAATA",4,74.73,6.45,-4.31,0.7,1.5,1.22,0.04,">1 nonsynonymous","N13R F44P Y175A",3
"lib1","SARS-CoV-2","ATCTTTCAATTAATAT",4,18.74,8.37,-2.4,0.23,1.5,1.07,0.02,">1 nonsynonymous","F17K T63D F160R",3
"lib1","SARS-CoV-2","ATCTTTCAGAAACGCA",3,65.3,10.78,0.02,0.05,2.96,1.01,0,">1 nonsynonymous","L122V N130F",2
"lib1","SARS-CoV-2","ATCTTTCATAACGCGG",1,18.44,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","I142R Y175K",2
"lib1","SARS-CoV-2","ATCTTTCCTTAGAGCT",5,119.97,10.67,-0.09,0.05,2.89,1.05,0,"1 nonsynonymous","F62I",1
"lib1","SARS-CoV-2","ATCTTTCTCAGCGACT",3,70.65,6,-4.76,1.63,1.5,1.15,0.01,">1 nonsynonymous","K128S C150P",2
"lib1","SARS-CoV-2","ATCTTTCTTTAAGCCA",1,104.3,10.5,-0.27,0.06,2.89,1.06,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","ATCTTTGACATTAAAC",4,21.07,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","S41L V77D N109L T140L G166S Q176T",6
"lib1","SARS-CoV-2","ATCTTTGATGGTGTGT",6,98.34,10.3,-0.47,0.06,2.92,1.05,0,">1 nonsynonymous","F44L P54I C61S",3
"lib1","SARS-CoV-2","ATCTTTGGCATAAACA",3,14.74,6.56,-4.2,0.7,1.5,1.08,0.07,">1 nonsynonymous","R124P G155A",2
"lib1","SARS-CoV-2","ATCTTTGGGTTTGATA",3,5.36,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","A42N T55Q F62M I88G",4
"lib1","SARS-CoV-2","ATCTTTTATGACCTGA",2,44.49,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10G S19E N40I E154R Y175L",5
"lib1","SARS-CoV-2","ATCTTTTATTATGATA",6,73.16,9.36,-1.41,0.14,1.7,1.18,0.01,">1 nonsynonymous","W23S Y39M Y143F V153I",4
"lib1","SARS-CoV-2","ATCTTTTCCGCAAATT",5,92.53,10.14,-0.62,0.11,2.79,1.04,0.01,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","ATCTTTTCCTGAAAAG",5,41.36,10.03,-0.74,0.1,2.72,1.01,0,"1 nonsynonymous","S19T",1
"lib1","SARS-CoV-2","ATCTTTTCTAATTATT",7,99.82,10.8,0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATCTTTTTACTTAATG",2,15.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103A H189V",2
"lib1","SARS-CoV-2","ATCTTTTTCTCTGGCG",8,4.02,NA,NA,NA,NA,NA,NA,"stop","T55* D98N V103H F167I P197A",5
"lib1","SARS-CoV-2","ATCTTTTTGACTGGTA",4,71.73,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","E10N I28S I138R V173S",4
"lib1","SARS-CoV-2","ATCTTTTTTCAACAGG",4,135.47,10.27,-0.5,0.04,2.89,1,0,">1 nonsynonymous","P54G I142T",2
"lib1","SARS-CoV-2","ATCTTTTTTGAATGGG",4,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A V20H T46F K56L Y123A G146W F156S P197H",8
"lib1","SARS-CoV-2","ATCTTTTTTGCGCTGA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","T55N L95V D112* T201Y",4
"lib1","SARS-CoV-2","ATCTTTTTTGGCAAGG",1,44.04,9.56,-1.2,0.06,2.82,1.14,0,">1 nonsynonymous","V37G V65M S113T Q168A",4
"lib1","SARS-CoV-2","ATGAAAAAAAAACGAA",2,36.56,10.62,-0.14,0.07,2.9,1.05,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","ATGAAAAAAAACCGTA",5,48.52,10.7,-0.07,0.04,2.93,1.02,0,">1 nonsynonymous","T3Y G196R",2
"lib1","SARS-CoV-2","ATGAAAAAAAAGAAAA",8,84.12,9.55,-1.21,0.12,1.98,1.16,0.01,">1 nonsynonymous","Y21T Y35L F44A",3
"lib1","SARS-CoV-2","ATGAAAAAAAGACTGG",4,1.1,NA,NA,NA,NA,NA,NA,"stop","N58* Y121K T201L",3
"lib1","SARS-CoV-2","ATGAAAAAAATATTCT",1,17.66,6.86,-3.9,0.53,1.5,1.09,0.05,">1 nonsynonymous","F17L V71L V180Y",3
"lib1","SARS-CoV-2","ATGAAAAAACACATAT",3,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R L60P Y91L G116L",4
"lib1","SARS-CoV-2","ATGAAAAAAGAGACAT",6,52.54,6.74,-4.03,0.48,1.5,1.07,0.03,">1 nonsynonymous","F12W Y35C A42D Y91M E141C",5
"lib1","SARS-CoV-2","ATGAAAAAATAGAAGG",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Q C61S I88T F99E F160G",5
"lib1","SARS-CoV-2","ATGAAAAAATCTGAGG",9,4.16,NA,NA,NA,NA,NA,NA,"stop","N30* F47N E76G C158V",4
"lib1","SARS-CoV-2","ATGAAAAAATGAACTA",1,9.54,6.42,-4.35,0.65,1.5,1.11,0.02,">1 nonsynonymous","E10M I104R N120L",3
"lib1","SARS-CoV-2","ATGAAAAACAAAAGAA",3,51.25,9.78,-0.99,0.11,2.51,1.05,0,">1 nonsynonymous","C6D D34Q S200V",3
"lib1","SARS-CoV-2","ATGAAAAACAAATGGT",1,2.39,NA,NA,NA,NA,NA,NA,"stop","N30L G51C E154*",3
"lib1","SARS-CoV-2","ATGAAAAACGGGTGTA",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Q84L W106L L122V",4
"lib1","SARS-CoV-2","ATGAAAAAGCCGTTAA",2,13.14,6.35,-4.41,0.42,1.5,1.14,0.02,">1 nonsynonymous","R16K A89L G116R",3
"lib1","SARS-CoV-2","ATGAAAAAGTGCTTCT",7,32.61,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L95S A105I",2
"lib1","SARS-CoV-2","ATGAAAAATGCAACTG",4,14.5,6.02,-4.75,1.24,3,1.25,0.02,">1 nonsynonymous","I2L N40Y I104K V115K E135W",5
"lib1","SARS-CoV-2","ATGAAAAATTAAAACT",3,34.49,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K56S D68E R124G",3
"lib1","SARS-CoV-2","ATGAAAAATTTAACTT",2,69.67,10.1,-0.66,0.09,2.57,1,0,">1 nonsynonymous","T85R F185C",2
"lib1","SARS-CoV-2","ATGAAAACCCCCCAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D T15K I88K W106F N120L T148L C195Y",7
"lib1","SARS-CoV-2","ATGAAAACGATTTTCT",2,28.85,10.76,0,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAAAACGGATAACT",10,47.16,6,-4.76,2,3,1.37,0.01,">1 nonsynonymous","C6S D68S K87A S184L",4
"lib1","SARS-CoV-2","ATGAAAACTTATCTGA",2,85.88,10.43,-0.34,0.04,2.85,1.09,0,">1 nonsynonymous","C61T K128F",2
"lib1","SARS-CoV-2","ATGAAAAGACTGACAG",2,15.4,10.77,0,0.06,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAAAAGAGCGATGT",1,33.96,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C49Y N58I N109T R127V E141F S184Y",6
"lib1","SARS-CoV-2","ATGAAAAGGAACAGTT",3,19.82,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G51D I88N",2
"lib1","SARS-CoV-2","ATGAAAATAGAGATCT",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H Y35C N120S Y123H N157L",5
"lib1","SARS-CoV-2","ATGAAAATATCTTAGT",3,81.49,8.45,-2.31,0.11,2.68,1.11,0,"1 nonsynonymous","Y175C",1
"lib1","SARS-CoV-2","ATGAAAATCACCCATA",3,58.6,10.79,0.03,0.05,2.89,1.05,0,"1 nonsynonymous","I2G",1
"lib1","SARS-CoV-2","ATGAAAATCCAGGAAG",2,74.19,8.66,-2.1,0.11,2.75,1.07,0,">1 nonsynonymous","K56C T100L N118P",3
"lib1","SARS-CoV-2","ATGAAAATCTTGTAAT",5,100.81,10.78,0.02,0.06,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAAAATGCTTGGAT",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122W T201R",2
"lib1","SARS-CoV-2","ATGAAAATTAAGGGAA",8,139.01,10.36,-0.4,0.05,2.89,1.05,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","ATGAAAATTGTATCTT",1,8.49,10.35,-0.41,0.24,1.65,1.02,0.02,">1 nonsynonymous","F12N A42E N58H",3
"lib1","SARS-CoV-2","ATGAAACAAGTAAGCT",14,3.38,NA,NA,NA,NA,NA,NA,"stop","A33S S41* R124K G152D",4
"lib1","SARS-CoV-2","ATGAAACACAGGTTGA",5,1.39,NA,NA,NA,NA,NA,NA,"stop","N24T T55F L60R K94* I104T",5
"lib1","SARS-CoV-2","ATGAAACACATACCCC",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88M D98I V103D N151V",4
"lib1","SARS-CoV-2","ATGAAACACTAGGAAA",4,13.38,10.77,0,0.19,2.94,1,0.01,">1 nonsynonymous","P7S D59G",2
"lib1","SARS-CoV-2","ATGAAACAGGAGTGCG",2,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S V20R D59T L122F G155S",5
"lib1","SARS-CoV-2","ATGAAACAGTTACTAG",7,77.35,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L60V G86V T201K",3
"lib1","SARS-CoV-2","ATGAAACATAAGACAG",3,41.99,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","N4M G117H E135G V180K",4
"lib1","SARS-CoV-2","ATGAAACATGATAGAA",6,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35H F62M",2
"lib1","SARS-CoV-2","ATGAAACCAACGATAG",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P T55N D68L G83K D90Y",5
"lib1","SARS-CoV-2","ATGAAACCAGTTAAAC",1,31.64,6.08,-4.68,0.9,1.5,1.17,0.02,">1 nonsynonymous","V20W L57S",2
"lib1","SARS-CoV-2","ATGAAACCGAAATAAT",4,0.3,NA,NA,NA,NA,NA,NA,"stop","D98S G166*",2
"lib1","SARS-CoV-2","ATGAAACCGACACCCG",1,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q K128I D137C P161S",4
"lib1","SARS-CoV-2","ATGAAACCTATGAGAC",7,3.07,NA,NA,NA,NA,NA,NA,"stop","N13L Y21* A42R S147T",4
"lib1","SARS-CoV-2","ATGAAACGTAGGATAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76K N120M K128R T201V",4
"lib1","SARS-CoV-2","ATGAAACTAAGTAGAT",1,16.16,10.83,0.06,0.1,2.94,1.06,0,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","ATGAAACTCTGTGCGA",4,73.64,6,-4.76,1.07,1.5,1.19,0.02,">1 nonsynonymous","G146A C150D F156Q",3
"lib1","SARS-CoV-2","ATGAAACTGGGATCTA",7,34.23,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T85K G152F P161W C195S",4
"lib1","SARS-CoV-2","ATGAAACTGGTTAATT",1,15.81,8.28,-2.49,0.14,2.57,1.14,0.01,">1 nonsynonymous","L57M N120C A145Q H189S",4
"lib1","SARS-CoV-2","ATGAAACTTGCTGGGC",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I N107Q A145F F160R",4
"lib1","SARS-CoV-2","ATGAAACTTTTTGTAC",2,47.1,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5V T15N K48I L111R Y159L Y178L",6
"lib1","SARS-CoV-2","ATGAAAGAAAACAATT",2,73.4,10.11,-0.66,0.09,2.62,1.04,0,">1 nonsynonymous","N13S L57I",2
"lib1","SARS-CoV-2","ATGAAAGAACAATATC",7,39.8,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37M N107Y K114Q Y121S P133G",5
"lib1","SARS-CoV-2","ATGAAAGAAGATGTCT",3,36.72,8.62,-2.14,0.25,1.5,1,0.03,">1 nonsynonymous","Y119G P133L",2
"lib1","SARS-CoV-2","ATGAAAGAATCTAACC",3,37.5,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86S Q176S",2
"lib1","SARS-CoV-2","ATGAAAGAATTATATC",7,125.1,9.97,-0.79,0.1,1.91,1.09,0,">1 nonsynonymous","S41W W106R Y178F",3
"lib1","SARS-CoV-2","ATGAAAGACTCTGTTC",4,28.39,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6M Y143D T201R",3
"lib1","SARS-CoV-2","ATGAAAGAGCAAGGGA",2,17.53,10.75,-0.01,0.07,2.88,1.05,0,">1 nonsynonymous","S41L I104W",2
"lib1","SARS-CoV-2","ATGAAAGCATTAAACG",8,126.24,10.67,-0.1,0.05,2.95,1.01,0,"1 nonsynonymous","K26H",1
"lib1","SARS-CoV-2","ATGAAAGCCATTTTCG",6,128.06,10.9,0.14,0.05,2.96,1.02,0,">1 nonsynonymous","Q163L K199G",2
"lib1","SARS-CoV-2","ATGAAAGCCGTCTCAA",4,30.69,10.12,-0.65,0.06,2.87,1,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","ATGAAAGCCTTGATAT",4,40.45,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F8T S29T C49P Y119F P149I C195F",6
"lib1","SARS-CoV-2","ATGAAAGCGCAATAAC",6,55.99,9.19,-1.58,0.2,1.61,1.26,0.02,">1 nonsynonymous","A81C V173S",2
"lib1","SARS-CoV-2","ATGAAAGCGGCCATAA",2,36.51,8.76,-2,0.2,2.21,1.03,0.01,">1 nonsynonymous","T15N V115L G146R",3
"lib1","SARS-CoV-2","ATGAAAGGATATCGTG",5,44.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N1L G86E R127D",3
"lib1","SARS-CoV-2","ATGAAAGGGTAAACTG",2,81.97,10.25,-0.52,0.07,2.95,1,0,"1 nonsynonymous","E154H",1
"lib1","SARS-CoV-2","ATGAAAGGTAATAGAA",3,108.44,9.82,-0.94,0.04,2.82,1.05,0,">1 nonsynonymous","W23F Y39E G174R",3
"lib1","SARS-CoV-2","ATGAAAGTAAATTGGG",4,52.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L60N D68N S164T",3
"lib1","SARS-CoV-2","ATGAAAGTAGATAAGG",9,36.03,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y50R N107V V115T Y121D R127G F160A",6
"lib1","SARS-CoV-2","ATGAAAGTATCTCAAG",3,27.11,9.79,-0.98,0.22,1.56,1.06,0.03,">1 nonsynonymous","F17A A33R",2
"lib1","SARS-CoV-2","ATGAAAGTCCCTGATT",5,83.3,9.03,-1.73,0.11,2.56,1.17,0,">1 nonsynonymous","L60S G146R",2
"lib1","SARS-CoV-2","ATGAAAGTCGGCTGGC",2,16.75,9,-1.77,0.1,2.74,1.01,0.01,">1 nonsynonymous","N118V Q168L",2
"lib1","SARS-CoV-2","ATGAAAGTGCGACTCG",5,74.95,6,-4.76,2,3,1.16,0,">1 nonsynonymous","K114M F134S Y165S",3
"lib1","SARS-CoV-2","ATGAAAGTTAAAGCAA",3,9.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A22T L95P",2
"lib1","SARS-CoV-2","ATGAAATAACGATACG",4,57.59,10.06,-0.7,0.09,2.38,1.05,0,">1 nonsynonymous","K26M T100A K128L",3
"lib1","SARS-CoV-2","ATGAAATAAGTATAAG",2,17.93,10.74,-0.02,0.04,3,1,0,">1 nonsynonymous","Y39V K56G S200E",3
"lib1","SARS-CoV-2","ATGAAATATGCCGATT",2,1.28,NA,NA,NA,NA,NA,NA,"stop","L5K Y91S G117F L125* K199G",5
"lib1","SARS-CoV-2","ATGAAATCAGGCTGTA",5,33.16,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P7D V103C N118P",3
"lib1","SARS-CoV-2","ATGAAATGCTCTTTAC",2,9.93,7.65,-3.11,0.21,1.5,1.03,0.02,">1 nonsynonymous","E10Q G86C I104V",3
"lib1","SARS-CoV-2","ATGAAATGGATGATAA",5,173.47,10.3,-0.46,0.04,2.78,1.01,0,">1 nonsynonymous","V65T T100L",2
"lib1","SARS-CoV-2","ATGAAATGGTTAAACT",2,21,9.21,-1.55,0.14,1.71,1.07,0.01,">1 nonsynonymous","A18G W106C S200N",3
"lib1","SARS-CoV-2","ATGAAATGTGCCTCAG",1,20.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35L C61L S69L V103I L131V G146M",6
"lib1","SARS-CoV-2","ATGAAATTCCCCTGGT",5,0.16,NA,NA,NA,NA,NA,NA,"stop","Y35D N92* A105K P191S",4
"lib1","SARS-CoV-2","ATGAAATTCGATTCTG",7,6.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S V77Q Y91V W106L P149Q",5
"lib1","SARS-CoV-2","ATGAACAACGCAACAA",1,9.17,6.41,-4.35,0.51,1.5,1.06,0.03,">1 nonsynonymous","I28M N58R N107R L162C",4
"lib1","SARS-CoV-2","ATGAACAAGCCGAACC",1,7.28,10.37,-0.4,0.1,2.94,1.03,0.01,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","ATGAACAAGGCTGGAG",1,9.88,8.79,-1.97,0.23,2.87,1.13,0.01,">1 nonsynonymous","S41V Y119P T201M",3
"lib1","SARS-CoV-2","ATGAACAATAACGACT",8,116.62,10.36,-0.4,0.07,2.93,1,0,">1 nonsynonymous","T63S G83W S129N I138L",4
"lib1","SARS-CoV-2","ATGAACAATATGTCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10H L38* F70* G83L D112*",5
"lib1","SARS-CoV-2","ATGAACAATCAAAATA",8,155.17,7.88,-2.88,0.19,1.5,1.16,0.01,">1 nonsynonymous","G74F N110T F160G",3
"lib1","SARS-CoV-2","ATGAACACATGCTAAC",1,10.45,6,-4.76,2,3,1.07,0,">1 nonsynonymous","A33E P82F A105H Y123V",4
"lib1","SARS-CoV-2","ATGAACACATTACACT",5,1.22,NA,NA,NA,NA,NA,NA,"stop","R16G F126V S139*",3
"lib1","SARS-CoV-2","ATGAACACCCCAAGAT",3,97.35,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V65Q G86M N130S E154F P177C",5
"lib1","SARS-CoV-2","ATGAACACGCCATGAA",2,13.89,6.83,-3.93,0.58,1.5,1.32,0.04,">1 nonsynonymous","I28V A42N T55H A105L",4
"lib1","SARS-CoV-2","ATGAACACTTATCACG",6,64.05,10.1,-0.67,0.09,2.42,1.06,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","ATGAACAGATCGATGC",1,7.56,6,-4.76,2,1.5,1.45,0.05,">1 nonsynonymous","G9S Q84N A105V F160I T201W",5
"lib1","SARS-CoV-2","ATGAACAGGCGTTCAC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","V181*",1
"lib1","SARS-CoV-2","ATGAACATAACAGGGT",9,244.78,10.77,0.01,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAACATAAGAAAAC",4,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F K56P W106S",3
"lib1","SARS-CoV-2","ATGAACATTGCAAATA",4,61.08,9.54,-1.22,0.12,2.43,1.14,0.01,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","ATGAACATTTAAGTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","T55Y P82* I142N",3
"lib1","SARS-CoV-2","ATGAACATTTGAGAAT",1,3.37,NA,NA,NA,NA,NA,NA,"stop","F62* C150A",2
"lib1","SARS-CoV-2","ATGAACCAAATGGGTC",1,18.47,9.88,-0.89,0.08,2.84,1.06,0,">1 nonsynonymous","E135G Y175H",2
"lib1","SARS-CoV-2","ATGAACCAATATCCCC",4,101.79,10.73,-0.03,0.04,2.93,1.03,0,">1 nonsynonymous","G9I S43K",2
"lib1","SARS-CoV-2","ATGAACCAGTCTCTAC",2,20.15,10.82,0.06,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAACCATCAGGTCA",2,67.3,10.76,0,0.06,2.91,1.03,0,">1 nonsynonymous","F160S K198T",2
"lib1","SARS-CoV-2","ATGAACCATCATAGTC",4,94.72,10.38,-0.38,0.06,2.91,1,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","ATGAACCCAAGAGATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85C V103Q F126Y",3
"lib1","SARS-CoV-2","ATGAACCCCACACCCG",5,144.81,9.14,-1.62,0.09,2.83,1.12,0,">1 nonsynonymous","K87T T170R",2
"lib1","SARS-CoV-2","ATGAACCCCATGGCGT",3,80.74,10.63,-0.14,0.04,2.9,1.05,0,"1 nonsynonymous","S19N",1
"lib1","SARS-CoV-2","ATGAACCCGTAGTCAA",8,62,8.61,-2.15,0.16,1.55,1.15,0.01,">1 nonsynonymous","A33G D137C",2
"lib1","SARS-CoV-2","ATGAACCCTAATAACC",1,25.66,10.22,-0.54,0.2,1.85,1.1,0.02,">1 nonsynonymous","A14P T85A",2
"lib1","SARS-CoV-2","ATGAACCGCAGGCCTA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","E10* K56R S129G",3
"lib1","SARS-CoV-2","ATGAACCGGGACTAAA",1,40.71,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F47I V71P K114P",3
"lib1","SARS-CoV-2","ATGAACCGTGATCATA",3,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G D90L G116C F126S E135A K199E",6
"lib1","SARS-CoV-2","ATGAACCGTGCAACTT",1,0.28,NA,NA,NA,NA,NA,NA,"stop","T3E P96* K128A",3
"lib1","SARS-CoV-2","ATGAACCTATGTTGAT",11,7.85,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","N13M S43Y Y91R C102S K199S",5
"lib1","SARS-CoV-2","ATGAACCTTTTTGAAA",1,6.99,10.62,-0.15,0.23,2.55,1,0.01,">1 nonsynonymous","S41P L122A N151L E186H",4
"lib1","SARS-CoV-2","ATGAACGAAGATACCA",3,15.84,6,-4.76,2,2.97,1.17,0.01,">1 nonsynonymous","C6Y R27D L122E R179K",4
"lib1","SARS-CoV-2","ATGAACGACCCTAACT",1,40.34,10.39,-0.37,0.07,2.74,1.08,0,">1 nonsynonymous","N13Y V37W T100L",3
"lib1","SARS-CoV-2","ATGAACGATATGCCAA",3,29.59,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","A18S P96H C150S",3
"lib1","SARS-CoV-2","ATGAACGCATACCGAC",10,82.72,10.81,0.04,0.07,2.94,1.03,0,">1 nonsynonymous","T55Q T148A",2
"lib1","SARS-CoV-2","ATGAACGCCCAGGCAA",4,45.66,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F47L V65A L131Q",3
"lib1","SARS-CoV-2","ATGAACGCCTTAATGT",2,10.21,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1I C49A A81Y D97S T148Y E154I V181K",7
"lib1","SARS-CoV-2","ATGAACGTACAATCTA",5,71.77,10.64,-0.12,0.1,2.89,1.11,0,"1 nonsynonymous","N110H",1
"lib1","SARS-CoV-2","ATGAACGTACCACCTG",4,67.9,6.27,-4.5,0.79,1.5,1.19,0.03,">1 nonsynonymous","A89P R136W T170Y",3
"lib1","SARS-CoV-2","ATGAACGTAGATGAAT",6,62.21,10.81,0.04,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAACGTCCTTAACT",4,1.46,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib1","SARS-CoV-2","ATGAACGTTGAAAACT",1,27.24,10.94,0.17,0.09,2.8,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAACTAAAAAATTA",9,419.16,9.82,-0.94,0.03,2.92,1.04,0,"1 nonsynonymous","G166V",1
"lib1","SARS-CoV-2","ATGAACTACTGAAACT",4,31.54,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","V32R A89I D112L C158H",4
"lib1","SARS-CoV-2","ATGAACTCCACAATAA",7,1.59,NA,NA,NA,NA,NA,NA,"stop","A18P R27V T63H Q84F C150* S200N",6
"lib1","SARS-CoV-2","ATGAACTCTATCTAAC",1,3.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R78E",1
"lib1","SARS-CoV-2","ATGAACTGACAGATGG",2,30.75,6.35,-4.42,0.91,1.5,1.15,0.06,">1 nonsynonymous","C102F R136N Y143A",3
"lib1","SARS-CoV-2","ATGAACTGCATTGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F V77L F99N S164A P197Y",5
"lib1","SARS-CoV-2","ATGAACTGTCTGGTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","V71E N157I K199*",3
"lib1","SARS-CoV-2","ATGAACTTAGTACGGG",3,1.25,NA,NA,NA,NA,NA,NA,"stop","Y21E C61S Y91* C158S",4
"lib1","SARS-CoV-2","ATGAAGAAAATAATTA",3,50.65,6.18,-4.59,0.62,1.5,1.16,0.01,">1 nonsynonymous","Y35I G86L V173A L187M",4
"lib1","SARS-CoV-2","ATGAAGAACTAACGGT",6,58.72,9.87,-0.9,0.1,2.4,1.03,0,">1 nonsynonymous","N4G A22E G83K N107C",4
"lib1","SARS-CoV-2","ATGAAGACAAATGTAA",4,0.38,NA,NA,NA,NA,NA,NA,"stop","L38M D98N R127*",3
"lib1","SARS-CoV-2","ATGAAGACCACTATAA",5,25.23,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99V A105R V181C T201Q",4
"lib1","SARS-CoV-2","ATGAAGACCCAACTAA",5,29.81,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Q144V P177W",2
"lib1","SARS-CoV-2","ATGAAGACGCACAGCA",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D G74V G101M W106V N151R",5
"lib1","SARS-CoV-2","ATGAAGACGTGGGCCT",4,39.41,10.57,-0.19,0.07,2.92,1,0,">1 nonsynonymous","R16M G116T",2
"lib1","SARS-CoV-2","ATGAAGAGAAACGACT",5,36.45,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","S29K A105V R127L F156V G166Y",5
"lib1","SARS-CoV-2","ATGAAGAGAAAGAAAG",2,40.34,7.27,-3.49,0.38,1.5,1.19,0.04,">1 nonsynonymous","T100S F126Y I138L E154W H189F",5
"lib1","SARS-CoV-2","ATGAAGAGGGCAAACC",3,73.26,10.77,0.01,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAAGATCAGGTTAG",8,138.31,10.21,-0.55,0.05,2.76,1.01,0,">1 nonsynonymous","V37W F99L P149A",3
"lib1","SARS-CoV-2","ATGAAGCAACCACCGA",7,52.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23S K48W A81N T85P W106L Y123T Y175L",7
"lib1","SARS-CoV-2","ATGAAGCACTTAGATA",3,12.17,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","Y21V C49T A89G",3
"lib1","SARS-CoV-2","ATGAAGCCTTTCGATT",1,11.5,10.66,-0.11,0.08,2.97,1,0,">1 nonsynonymous","K48V Q144S",2
"lib1","SARS-CoV-2","ATGAAGCGTTGCAAAC",7,26.52,6,-4.76,1.44,1.5,1.15,0.02,">1 nonsynonymous","D59M V71M D90V N107I S164G",5
"lib1","SARS-CoV-2","ATGAAGCTCGTGCACT",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H I142N",2
"lib1","SARS-CoV-2","ATGAAGGAACGACTGA",1,12.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14S C150H",2
"lib1","SARS-CoV-2","ATGAAGGATCGCTTAG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M S29T Y93G E154P L183R",5
"lib1","SARS-CoV-2","ATGAAGGCAACACCTA",2,6.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95W G117P G172K",3
"lib1","SARS-CoV-2","ATGAAGGCACAATCTT",7,19.86,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21A V71R P197R",3
"lib1","SARS-CoV-2","ATGAAGGGTGCACTTT",2,27.93,7.15,-3.61,0.24,1.5,1.19,0.01,">1 nonsynonymous","W23Q S147F",2
"lib1","SARS-CoV-2","ATGAAGGTAAACTAAC",5,129.34,9.92,-0.85,0.12,2.66,1.05,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","ATGAAGGTGAACCTAC",10,70.39,6.16,-4.6,0.62,1.5,1.1,0.01,">1 nonsynonymous","P54E P96A W106I E154W",4
"lib1","SARS-CoV-2","ATGAAGGTGTCAGCAA",7,100.91,10.74,-0.02,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAAGGTTGCAATAC",4,12.98,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","C6F A22E D34I S113L Q168A",5
"lib1","SARS-CoV-2","ATGAAGTAAAGCCAGA",6,38.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T A89S D137S G174S",4
"lib1","SARS-CoV-2","ATGAAGTAAGCACCAT",2,27.93,8.66,-2.11,0.16,2.23,1.03,0.01,">1 nonsynonymous","G117C E141Q E154N",3
"lib1","SARS-CoV-2","ATGAAGTAGTTAAAAT",5,62.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I28S R124M L131S G174V Q176P",5
"lib1","SARS-CoV-2","ATGAAGTATATACACA",2,21.25,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N64S A89L R136K",3
"lib1","SARS-CoV-2","ATGAAGTCCTAAAATG",3,5.37,6.58,-4.19,0.6,3,1.04,0.01,">1 nonsynonymous","Y91R P96R N110V L187R",4
"lib1","SARS-CoV-2","ATGAAGTCTATACGCA",4,36.7,9.93,-0.83,0.08,2.7,1.01,0,">1 nonsynonymous","Y39R L122A T148L G152I",4
"lib1","SARS-CoV-2","ATGAAGTGCCCTGTCC",2,82.96,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I138M G152N Y159S P197T",4
"lib1","SARS-CoV-2","ATGAAGTTATATATAG",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L F12A V32I D34L I138M K198W",6
"lib1","SARS-CoV-2","ATGAAGTTCAACCCTT",1,53.26,8.52,-2.24,0.15,2.5,1.04,0.01,">1 nonsynonymous","V11Y Y119A F160P",3
"lib1","SARS-CoV-2","ATGAAGTTCCTGGGGT",9,39.35,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C6V N40K L57N Y93C",4
"lib1","SARS-CoV-2","ATGAAGTTTAAATGAT",6,98.16,10.05,-0.71,0.1,2.05,1.06,0,">1 nonsynonymous","E10S V52N",2
"lib1","SARS-CoV-2","ATGAATAAAAGCAAAC",5,19.68,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F99V Q144I",2
"lib1","SARS-CoV-2","ATGAATAAAAGTCACG",6,45.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S19R Y35W P96S F167L",4
"lib1","SARS-CoV-2","ATGAATAAATATTTTG",2,46.54,10.89,0.13,0.09,2.89,1.07,0,">1 nonsynonymous","V37A T201N",2
"lib1","SARS-CoV-2","ATGAATAACAGACAGA",3,6.4,8.56,-2.2,0.47,1.5,1,0.07,">1 nonsynonymous","T15G N58A N107M V194I",4
"lib1","SARS-CoV-2","ATGAATAACATAAACA",1,17.45,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14R F62G V77L P96Q F167R",5
"lib1","SARS-CoV-2","ATGAATAAGATTCCTC",1,17.99,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S19M N120S A145I C158G P197Q",5
"lib1","SARS-CoV-2","ATGAATAAGCCTGAAG",7,87.28,8.36,-2.41,0.11,2.87,1.02,0,"1 nonsynonymous","N157Y",1
"lib1","SARS-CoV-2","ATGAATAAGGTACTTG",2,1.43,NA,NA,NA,NA,NA,NA,"stop","I2G K132*",2
"lib1","SARS-CoV-2","ATGAATAATCTATAAC",13,71.86,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Q79R L95P C150L",3
"lib1","SARS-CoV-2","ATGAATACAACCAAAG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H I88E N107M L183S",4
"lib1","SARS-CoV-2","ATGAATACACCTTGAA",8,0.87,NA,NA,NA,NA,NA,NA,"stop","T85* Y91A S113R I142P",4
"lib1","SARS-CoV-2","ATGAATACCAACGCTA",5,267.42,10.12,-0.64,0.08,2.58,1.01,0,">1 nonsynonymous","N4V P54C K132A",3
"lib1","SARS-CoV-2","ATGAATACCCAGGTAA",9,58.72,8.74,-2.02,0.32,1.5,1,0.04,">1 nonsynonymous","G51I F134A",2
"lib1","SARS-CoV-2","ATGAATACTAAAATCA",3,20.87,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A42S N64S I88S Y121K P149Y L162I",6
"lib1","SARS-CoV-2","ATGAATACTGATTAAC",2,125.73,10.73,-0.03,0.06,2.89,1.08,0,"1 nonsynonymous","Y39H",1
"lib1","SARS-CoV-2","ATGAATAGACGTCATT",2,15.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10P S29T Y39D F185A",4
"lib1","SARS-CoV-2","ATGAATAGAGAAGTTA",4,1.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATAGTAAGACAT",3,7.35,8.7,-2.07,0.42,1.5,1.16,0.06,">1 nonsynonymous","N24K Y66E D97S Y178L",4
"lib1","SARS-CoV-2","ATGAATAGTTGGTCTT",1,21.65,6.05,-4.71,1.28,1.5,1.24,0.06,">1 nonsynonymous","D90V L162E P169M",3
"lib1","SARS-CoV-2","ATGAATATATGAAACG",4,79.08,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9M N24A T55I T63C Y165S",5
"lib1","SARS-CoV-2","ATGAATATCCACGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17V K56T F62V I104K L122K R136L",6
"lib1","SARS-CoV-2","ATGAATATGACCGCGA",10,146.93,10.24,-0.52,0.08,2.31,1,0,">1 nonsynonymous","K56C N109R S129L K199Y",4
"lib1","SARS-CoV-2","ATGAATATGCCCTTGG",5,102.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37P G86L S113N E154V",4
"lib1","SARS-CoV-2","ATGAATATGCTTCTCT",5,321.16,8.14,-2.62,0.18,1.58,1.11,0.01,">1 nonsynonymous","L5Q Q176Y",2
"lib1","SARS-CoV-2","ATGAATATTACGTACT",2,22.96,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19R T55I D90L Y119S C150N",5
"lib1","SARS-CoV-2","ATGAATATTTTCTGCT",3,7.57,10.62,-0.14,0.11,2.8,1.05,0,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","ATGAATATTTTTAACT",24,177.24,6.02,-4.75,1.21,1.5,1.26,0.03,">1 nonsynonymous","I28K I104Y",2
"lib1","SARS-CoV-2","ATGAATCAAATATAGA",4,20.43,9.68,-1.08,0.09,2.74,1.1,0,">1 nonsynonymous","Y39G A145R",2
"lib1","SARS-CoV-2","ATGAATCAACCGCTAG",1,0.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATCAACTGACAC",2,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140V K198I",2
"lib1","SARS-CoV-2","ATGAATCACGCAGCTA",2,9.13,9.11,-1.65,0.14,2.99,1.09,0.01,">1 nonsynonymous","N1S T100L Y119L V173N",4
"lib1","SARS-CoV-2","ATGAATCACTCGTAAC",2,31.55,10.8,0.04,0.08,2.9,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAATCAGACCATTA",2,14.21,8.88,-1.88,0.21,2.15,1.09,0.03,">1 nonsynonymous","S41D D98V T140K P161G K198R",5
"lib1","SARS-CoV-2","ATGAATCAGGAATATT",4,131.52,10.34,-0.42,0.06,2.86,1.01,0,">1 nonsynonymous","F44Y N58S F134L",3
"lib1","SARS-CoV-2","ATGAATCCGAGACAGC",8,72.47,10.78,0.01,0.06,2.91,1.02,0,">1 nonsynonymous","R16L E141T",2
"lib1","SARS-CoV-2","ATGAATCCTAGGAACT",4,37.62,10.28,-0.49,0.04,2.9,1.05,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","ATGAATCGTGGACTGA",1,25.41,11,0.24,0.08,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATCTACAACCTC",5,333.58,10.75,-0.01,0.04,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAATCTATCATTTC",1,13.95,10.6,-0.16,0.05,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATCTATGTCAAA",2,20.51,10.72,-0.04,0.08,2.97,1.01,0.01,"1 nonsynonymous","N4R",1
"lib1","SARS-CoV-2","ATGAATCTTAAAGTCT",3,28.63,9.2,-1.57,0.29,2,1.29,0.03,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","ATGAATCTTCATGCCA",3,15.85,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","G101A",1
"lib1","SARS-CoV-2","ATGAATGATATACTTC",1,26.31,6,-4.76,1.57,1.5,1.24,0.02,">1 nonsynonymous","Y21K C61L",2
"lib1","SARS-CoV-2","ATGAATGCTGAAGACA",6,0.11,NA,NA,NA,NA,NA,NA,"stop","D34S K132N G146R T201*",4
"lib1","SARS-CoV-2","ATGAATGGAGATAATA",5,18.13,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","C6V P82Q K94S",3
"lib1","SARS-CoV-2","ATGAATGGGAGCAGGC",1,10.77,8.72,-2.04,0.13,2.97,1,0.01,">1 nonsynonymous","F44W Y119P S147C V153T",4
"lib1","SARS-CoV-2","ATGAATGGGATAAATA",5,24.59,10.12,-0.65,0.09,2.69,1.06,0,">1 nonsynonymous","S129T Q144F",2
"lib1","SARS-CoV-2","ATGAATGTACATCACG",7,0.9,NA,NA,NA,NA,NA,NA,"stop","I80L N151* V181K",3
"lib1","SARS-CoV-2","ATGAATGTCCATTATG",3,50.1,10.74,-0.02,0.05,2.97,1,0,">1 nonsynonymous","A33M V153N",2
"lib1","SARS-CoV-2","ATGAATTACACAGAAG",3,41.72,7.36,-3.4,0.27,1.5,1,0.03,">1 nonsynonymous","A89S L162S T201D",3
"lib1","SARS-CoV-2","ATGAATTACCCAATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","N4* L38R Y93T",3
"lib1","SARS-CoV-2","ATGAATTACCTAGATA",4,36.81,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6F L57N A105Q Y121L",4
"lib1","SARS-CoV-2","ATGAATTACGATCATA",6,40.61,10.78,0.02,0.08,2.89,1.08,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","ATGAATTCCAACACGT",2,6.33,9.96,-0.8,0.4,2.54,1.03,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATTCCTTACCTG",2,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T55Y",2
"lib1","SARS-CoV-2","ATGAATTTACCCCAGA",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N N92R P133E",3
"lib1","SARS-CoV-2","ATGAATTTATTTGCGT",7,88,10.73,-0.04,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAATTTGTACGCCG",13,129.96,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S T15F G51D R124F N157L",5
"lib1","SARS-CoV-2","ATGACAAAAGATCTAG",8,122.25,10.59,-0.18,0.05,2.87,1.08,0,"1 nonsynonymous","N151F",1
"lib1","SARS-CoV-2","ATGACAAACCAACGGG",3,41.98,6,-4.76,1.8,2.77,1.19,0,">1 nonsynonymous","S43A F99A G166A",3
"lib1","SARS-CoV-2","ATGACAAATAGATTGT",8,117.01,9.99,-0.78,0.06,2.8,1.04,0,">1 nonsynonymous","N1W K87G",2
"lib1","SARS-CoV-2","ATGACAAATAGTGCCG",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G G86F V115L Y121A",4
"lib1","SARS-CoV-2","ATGACAAATCAAGTAA",5,77.25,8.53,-2.24,0.15,1.5,1.06,0.01,">1 nonsynonymous","I104S Y119L T148D",3
"lib1","SARS-CoV-2","ATGACAAATGAGCGGT",10,111.36,10.57,-0.19,0.02,2.93,1.03,0,"1 nonsynonymous","G9I",1
"lib1","SARS-CoV-2","ATGACAAATGCGAAAG",1,17.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y35R Y119T V153M G172R P191L",5
"lib1","SARS-CoV-2","ATGACAACAGAATATG",3,17.11,10.76,0,0.06,2.97,1.01,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","ATGACAACCGCGACGG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","T85* D112K S139F V180S T201W",5
"lib1","SARS-CoV-2","ATGACAACTAGTACGG",6,68.03,6,-4.76,1.88,1.5,1.18,0.02,">1 nonsynonymous","N1K S113K V180F K198V",4
"lib1","SARS-CoV-2","ATGACAAGAAACGATC",11,0.11,NA,NA,NA,NA,NA,NA,"stop","N1S N40* L60G D97Y",4
"lib1","SARS-CoV-2","ATGACAAGAACACCAA",1,12.41,9.72,-1.05,0.06,2.92,1.05,0,">1 nonsynonymous","K87I F156V T201K",3
"lib1","SARS-CoV-2","ATGACAAGAACTAATT",4,27.79,9.59,-1.18,0.12,2.05,1.07,0.01,">1 nonsynonymous","E10L N13D",2
"lib1","SARS-CoV-2","ATGACAAGCCACGTTC",10,40.5,8.69,-2.07,0.18,1.5,1.15,0.02,">1 nonsynonymous","K94N F99M",2
"lib1","SARS-CoV-2","ATGACAAGTGAAAGAC",2,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L S139I",2
"lib1","SARS-CoV-2","ATGACAATACTTTGTT",2,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y D68L I88Q Y121S E141G",5
"lib1","SARS-CoV-2","ATGACAATATTTCACA",5,95.76,9.4,-1.36,0.13,1.61,1.14,0.01,">1 nonsynonymous","Y39L C49I Y66F I138D P197R",5
"lib1","SARS-CoV-2","ATGACAATGACCAAGC",3,23.29,8.29,-2.47,0.29,1.5,1,0.02,">1 nonsynonymous","L95S Y119L",2
"lib1","SARS-CoV-2","ATGACAATTAATCATC",1,30.19,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V37Y N92T K114L S147L",4
"lib1","SARS-CoV-2","ATGACAATTCCCAACA",4,0.62,NA,NA,NA,NA,NA,NA,"stop","V20R R136*",2
"lib1","SARS-CoV-2","ATGACAATTCGAAAAA",4,4.47,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib1","SARS-CoV-2","ATGACACAAAGAGAAG",2,17.58,6.05,-4.71,0.81,1.5,1.22,0.02,">1 nonsynonymous","K94T G101L G152V",3
"lib1","SARS-CoV-2","ATGACACAACCCATAT",3,52.14,10.54,-0.23,0.1,2.85,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","ATGACACAAGGAGAAT",5,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M E10A N64F Y91K N118S",5
"lib1","SARS-CoV-2","ATGACACAGACATATG",7,106.12,10.72,-0.05,0.04,2.92,1.06,0,">1 nonsynonymous","V37S F62S",2
"lib1","SARS-CoV-2","ATGACACAGCCACAAT",7,120.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25Y G101L",2
"lib1","SARS-CoV-2","ATGACACAGCCAGAGT",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D K87L K94P",3
"lib1","SARS-CoV-2","ATGACACATAGTAGAA",2,19.84,10.69,-0.08,0.07,2.88,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGACACATTGCCATT",1,11.69,7.01,-3.76,0.17,1.5,1.06,0.01,">1 nonsynonymous","Y121D G166Q",2
"lib1","SARS-CoV-2","ATGACACCAAAATTTC",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T L57S Y119S",3
"lib1","SARS-CoV-2","ATGACACCAATTATAA",1,31.9,10.14,-0.62,0.09,2.65,1.07,0,">1 nonsynonymous","G9P A33M T100S A192S T201V",5
"lib1","SARS-CoV-2","ATGACACCCAAACAGT",1,7.82,8.24,-2.52,0.39,1.9,1.18,0.02,">1 nonsynonymous","S41T N107T",2
"lib1","SARS-CoV-2","ATGACACCGAAATATG",1,45.87,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S45V C49Q V153T",3
"lib1","SARS-CoV-2","ATGACACCGCTCTGAG",4,2.71,NA,NA,NA,NA,NA,NA,"stop","Y50L C61Q C102* Y123* S139E L188C",6
"lib1","SARS-CoV-2","ATGACACCTGAATACT",10,130.25,8.97,-1.79,0.07,2.79,1.12,0,">1 nonsynonymous","I2M C61V G117K",3
"lib1","SARS-CoV-2","ATGACACCTTTATTTA",10,177.85,10.76,0,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGACACCTTTTAAAG",1,51.69,10.58,-0.18,0.05,2.92,1.03,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","ATGACACGATAGTAAA",3,12.34,8.82,-1.95,0.17,2.36,1.01,0.03,">1 nonsynonymous","D112L S200C",2
"lib1","SARS-CoV-2","ATGACACTCTTAATAC",4,20.47,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D90P N171S",2
"lib1","SARS-CoV-2","ATGACACTTCGTCTGT",3,12.54,9.48,-1.28,0.43,1.6,1.14,0.07,">1 nonsynonymous","N4C T15D D34L",3
"lib1","SARS-CoV-2","ATGACACTTGGTTGTT",1,8.17,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","T85L A89V N157F",3
"lib1","SARS-CoV-2","ATGACAGAAACATACA",1,30.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I P82S",2
"lib1","SARS-CoV-2","ATGACAGAACACTATG",1,23.06,6.13,-4.64,0.71,1.5,1.17,0.02,">1 nonsynonymous","A18C R25V L122T P149R",4
"lib1","SARS-CoV-2","ATGACAGATGCAGTTC",6,40.72,10.75,-0.02,0.06,2.87,1.08,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","ATGACAGCAGCACATA",10,242.95,10.44,-0.33,0.05,2.88,1.03,0,">1 nonsynonymous","T46S Y178N",2
"lib1","SARS-CoV-2","ATGACAGCCTCCACAA",4,47.01,9.74,-1.02,0.13,1.81,1.08,0.01,"1 nonsynonymous","I28R",1
"lib1","SARS-CoV-2","ATGACAGGCCAGAAAG",7,59.29,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9K I28G F47M D68N D90Y G116K Y175Q",7
"lib1","SARS-CoV-2","ATGACAGTAAATAAAG",1,12.26,10.44,-0.33,0.14,2.73,1.12,0.01,"1 nonsynonymous","Y35P",1
"lib1","SARS-CoV-2","ATGACATAAACAGACT",5,9.97,6.13,-4.63,1.65,3,1.14,0.01,">1 nonsynonymous","T15R S43T C49R G83S Q144Y",5
"lib1","SARS-CoV-2","ATGACATAAGAGAATG",4,96.71,10.44,-0.33,0.03,2.91,1.02,0,">1 nonsynonymous","G174P P191H",2
"lib1","SARS-CoV-2","ATGACATACATCGTTC",2,6.53,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F8K C49K E141N",3
"lib1","SARS-CoV-2","ATGACATACCCTCTAT",6,83.11,10.13,-0.64,0.1,2.36,1.01,0,">1 nonsynonymous","I2R S41K P133T",3
"lib1","SARS-CoV-2","ATGACATATAAAACCT",1,5.82,8.3,-2.47,0.26,1.8,1.06,0.01,">1 nonsynonymous","E10A P133L A145V",3
"lib1","SARS-CoV-2","ATGACATATGTTATTA",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S F167S",2
"lib1","SARS-CoV-2","ATGACATCCACAATTA",3,17.89,9.92,-0.85,0.16,2.09,1,0.01,">1 nonsynonymous","F8C T140D",2
"lib1","SARS-CoV-2","ATGACATCCCTGACAG",1,11.34,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V11S R73A Q84L K94V N110P S129I T140I",7
"lib1","SARS-CoV-2","ATGACATCCTCTAGAT",1,12.14,6.61,-4.15,0.39,1.5,1.08,0.02,">1 nonsynonymous","F17S V65R",2
"lib1","SARS-CoV-2","ATGACATCCTTCAATG",4,57.5,8.97,-1.79,0.13,1.56,1.12,0.01,">1 nonsynonymous","E10A F99I",2
"lib1","SARS-CoV-2","ATGACATCTAGGTTGT",5,62.43,6,-4.76,0.93,1.5,1.15,0.01,">1 nonsynonymous","T3Q S19H F62S N151L V181M",5
"lib1","SARS-CoV-2","ATGACATGACTTACTA",4,50.17,8.66,-2.1,0.12,2.35,1.14,0.01,">1 nonsynonymous","I2S T85D I142N",3
"lib1","SARS-CoV-2","ATGACCAAAAATACCA",2,9.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A18L T100A S139F L183M",4
"lib1","SARS-CoV-2","ATGACCAAACTGGCAA",14,246.23,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A18K N64R T100L S113L L122V Q176H",6
"lib1","SARS-CoV-2","ATGACCAAATATATAT",4,17.29,6,-4.76,0.71,3,1.06,0,">1 nonsynonymous","D59R D90N C150V",3
"lib1","SARS-CoV-2","ATGACCAACATATTAA",2,22.8,10.69,-0.07,0.1,2.89,1.06,0.01,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","ATGACCAAGCGGCCCT",5,67.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P82T G86H C158Y",3
"lib1","SARS-CoV-2","ATGACCAATCCATTGT",3,37.53,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V37M Y50N F62W N92D",4
"lib1","SARS-CoV-2","ATGACCATAAGACCTC",3,70.86,9.74,-1.02,0.03,2.86,1.04,0,">1 nonsynonymous","Y66N R73S",2
"lib1","SARS-CoV-2","ATGACCATCTCTGTGC",7,117.43,10.23,-0.54,0.03,2.95,1,0,">1 nonsynonymous","R78T Y91F G174K",3
"lib1","SARS-CoV-2","ATGACCCAATAACAAG",4,37.15,10.74,-0.03,0.09,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGACCCAATACCCGG",1,57.5,9.84,-0.92,0.12,2.4,1.03,0,">1 nonsynonymous","L5E A33E N40K P54E Q84T N130M",6
"lib1","SARS-CoV-2","ATGACCCCAAGTGGCC",1,4.75,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATGACCCCAGTCTGCA",4,84.3,8.66,-2.1,0.26,1.5,1,0.02,">1 nonsynonymous","S19V V37L E141A",3
"lib1","SARS-CoV-2","ATGACCCCCCTATTAG",4,28.39,10.74,-0.03,0.12,2.88,1,0.01,">1 nonsynonymous","S45Q K56S V173E",3
"lib1","SARS-CoV-2","ATGACCCCCGAACATC",1,21.16,10.76,0,0.1,2.86,1.1,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","ATGACCCCTTAACAAT",4,19.15,6,-4.76,2,3,1.08,0.01,"1 nonsynonymous","R179Y",1
"lib1","SARS-CoV-2","ATGACCCCTTCCCACG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35L G74* T170L T201A",4
"lib1","SARS-CoV-2","ATGACCCGAAACTGTA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","ATGACCCGGGTGTAAT",1,34.56,10.04,-0.73,0.09,2.56,1.11,0,">1 nonsynonymous","V103I G152C",2
"lib1","SARS-CoV-2","ATGACCCTGCTGCAAT",15,274.48,10.03,-0.73,0.06,2.77,1.03,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","ATGACCCTGTACATTT",1,14.25,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I80M V103Y G155T",3
"lib1","SARS-CoV-2","ATGACCCTGTTCTTTG",3,21.91,7.33,-3.43,0.48,1.51,1.04,0.04,">1 nonsynonymous","Q84F D112S G117T",3
"lib1","SARS-CoV-2","ATGACCGAAAACACCA",12,1.6,NA,NA,NA,NA,NA,NA,"stop","Y93* F99P",2
"lib1","SARS-CoV-2","ATGACCGGAGATATAT",6,206.24,8.6,-2.16,0.1,2.95,1.04,0,">1 nonsynonymous","V37I T55Y G146D Q168V",4
"lib1","SARS-CoV-2","ATGACCGGTTCCTATC",2,45.98,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59P R127F",2
"lib1","SARS-CoV-2","ATGACCGTAAGTTTTT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","C61P G86C K128D T201*",4
"lib1","SARS-CoV-2","ATGACCGTATTACCCT",2,74.53,10.58,-0.19,0.04,2.91,1.04,0,">1 nonsynonymous","N64K D98E",2
"lib1","SARS-CoV-2","ATGACCGTCCCCCTTA",3,161.66,6,-4.76,1.17,1.5,1.17,0.01,">1 nonsynonymous","N4K S36L D90F T148P Y178A",5
"lib1","SARS-CoV-2","ATGACCGTTCCTAAAA",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G R25L D34R C49T I104R",5
"lib1","SARS-CoV-2","ATGACCTAAAGCAAAA",11,84.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2E V20K K128T",3
"lib1","SARS-CoV-2","ATGACCTAGACTACAT",9,124.82,9.12,-1.65,0.14,1.67,1.18,0.01,">1 nonsynonymous","A105Q K128A",2
"lib1","SARS-CoV-2","ATGACCTAGCTAATAA",1,29.82,10.68,-0.08,0.06,2.89,1.05,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","ATGACCTAGTCGTAAA",9,3.76,NA,NA,NA,NA,NA,NA,"stop","I2Y C31R L131* P149D",4
"lib1","SARS-CoV-2","ATGACCTGAATACTCA",2,14.72,10.98,0.22,0.08,2.96,1,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","ATGACCTGATCAAATT",5,19.38,8.8,-1.96,0.29,1.66,1.06,0.06,">1 nonsynonymous","E76C Y123Q",2
"lib1","SARS-CoV-2","ATGACCTGTGTAAACT",1,21.85,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G86A G101A L122Y",3
"lib1","SARS-CoV-2","ATGACCTTAAGCGAAC",4,41.75,10.91,0.15,0.09,2.87,1.1,0,">1 nonsynonymous","D97A F160Y",2
"lib1","SARS-CoV-2","ATGACCTTAATAAAAC",4,25.53,6,-4.76,2,1.5,1.34,0.08,">1 nonsynonymous","Y39S A89T V115K L183R",4
"lib1","SARS-CoV-2","ATGACCTTACCTGACC",3,21.69,10.16,-0.61,0.1,2.88,1.02,0.01,">1 nonsynonymous","C61A S184M",2
"lib1","SARS-CoV-2","ATGACCTTAGATCTCC",3,28.98,6.67,-4.09,0.43,1.5,1.17,0.03,">1 nonsynonymous","G101N F167L",2
"lib1","SARS-CoV-2","ATGACCTTGAAATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L N120L",2
"lib1","SARS-CoV-2","ATGACCTTTCGTCCAT",1,18.95,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","C6T S45I N64W",3
"lib1","SARS-CoV-2","ATGACGAAAAAAAAAT",8,91.76,8.76,-2,0.1,2.3,1.14,0,">1 nonsynonymous","N107L S184T",2
"lib1","SARS-CoV-2","ATGACGAATCTGATTA",1,79.58,10.07,-0.7,0.08,2.74,1.02,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","ATGACGACACCAAAAA",10,86.41,6.08,-4.68,1.01,1.5,1.23,0.02,">1 nonsynonymous","N4F D59Q A89R",3
"lib1","SARS-CoV-2","ATGACGACCACCCTAT",1,2.54,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATGACGAGCTTAACCG",4,54.63,6.23,-4.54,0.36,1.5,1.15,0,">1 nonsynonymous","Y93T E135C L188Q",3
"lib1","SARS-CoV-2","ATGACGATAACACTAG",1,35.41,9.18,-1.59,0.11,2.7,1.2,0,">1 nonsynonymous","T100Y S139V F156N",3
"lib1","SARS-CoV-2","ATGACGATAATATAAT",5,59.9,6.05,-4.72,1.35,1.5,1.22,0.04,">1 nonsynonymous","N1T E10Q R25F A42V Y143N",5
"lib1","SARS-CoV-2","ATGACGATATATCCAG",7,117.67,10.34,-0.42,0.03,2.89,1.02,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","ATGACGATGCATCCAG",6,60.53,9.02,-1.75,0.18,1.5,1.1,0.02,">1 nonsynonymous","D68E T201I",2
"lib1","SARS-CoV-2","ATGACGATTGAAACTT",8,62.43,10.85,0.08,0.08,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGACGCAATCCGCCG",7,1.59,NA,NA,NA,NA,NA,NA,"stop","G9S W106* E154L",3
"lib1","SARS-CoV-2","ATGACGCAGATGACAC",7,70.97,10.42,-0.34,0.06,2.81,1.06,0,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","ATGACGCCTATCGAAG",1,6.51,10.24,-0.53,0.22,2.85,1,0.02,"1 nonsynonymous","W106I",1
"lib1","SARS-CoV-2","ATGACGCGAACTAAAA",4,67.81,8.14,-2.63,0.2,1.89,1.13,0.01,">1 nonsynonymous","G9R S113L",2
"lib1","SARS-CoV-2","ATGACGCGATAATCCA",3,65.3,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T63K Q84S V103I R127A P177K",5
"lib1","SARS-CoV-2","ATGACGCTGGTCGCAT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M A33Q R136A",3
"lib1","SARS-CoV-2","ATGACGGACCACACTG",21,154.29,6,-4.76,1.59,1.5,1.19,0.01,">1 nonsynonymous","I138K F167T",2
"lib1","SARS-CoV-2","ATGACGGAGAAAATCA",3,9.77,9.4,-1.37,0.24,1.79,1.17,0.03,">1 nonsynonymous","I2S G9Y S53Y T55I T85A S129I S200Y",7
"lib1","SARS-CoV-2","ATGACGGATAATAAAT",2,47.03,6,-4.76,1.74,3,1.13,0,">1 nonsynonymous","S36M G86F",2
"lib1","SARS-CoV-2","ATGACGGCTGGTATGT",6,35.54,10.87,0.1,0.06,2.99,1,0,">1 nonsynonymous","I2P T201Q",2
"lib1","SARS-CoV-2","ATGACGGTGAACCGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* A89W Y121S",3
"lib1","SARS-CoV-2","ATGACGTAAGCAGGGT",3,43.68,9.77,-0.99,0.1,1.85,1.08,0.01,">1 nonsynonymous","A89Q N110G",2
"lib1","SARS-CoV-2","ATGACGTACCAATTAA",2,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172V",1
"lib1","SARS-CoV-2","ATGACGTAGTACAGAC",3,59.43,10.75,-0.01,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGACGTATACACACG",8,819.89,10.72,-0.04,0.04,2.76,1.04,0,">1 nonsynonymous","R27D S41W T63L Y93S T201G",5
"lib1","SARS-CoV-2","ATGACGTATCGAATAT",1,8.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14T C61F C102A",3
"lib1","SARS-CoV-2","ATGACGTCGCCGATTA",1,5.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","ATGACTAAAACATCTT",4,93.17,8.39,-2.37,0.16,1.95,1.15,0.01,">1 nonsynonymous","I2K V37S G74E I142H",4
"lib1","SARS-CoV-2","ATGACTAAACTCTCTT",3,17.98,10.75,-0.01,0.14,2.77,1.13,0.01,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","ATGACTAAAGTCAACT",1,52.94,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","L60R I88F R136D Y143C",4
"lib1","SARS-CoV-2","ATGACTAAGCAGGCCT",2,1.42,NA,NA,NA,NA,NA,NA,"stop","C6Y N13* T100S W106V S129V",5
"lib1","SARS-CoV-2","ATGACTAATAGATGTC",4,70.96,10.35,-0.41,0.04,2.87,1.09,0,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","ATGACTAATATAAATT",3,18.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89C Y165G",2
"lib1","SARS-CoV-2","ATGACTAATATATACG",3,38.08,10.48,-0.28,0.07,2.93,1.01,0,">1 nonsynonymous","C61D Y66T I104L",3
"lib1","SARS-CoV-2","ATGACTACACGTGAGT",2,24.33,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19M W106N",2
"lib1","SARS-CoV-2","ATGACTACTGGACACA",7,69.96,6.18,-4.58,0.74,1.5,1.18,0.02,">1 nonsynonymous","D68P Y91N P149T",3
"lib1","SARS-CoV-2","ATGACTAGACCTTATT",1,15.91,10.41,-0.35,0.07,2.81,1.21,0,">1 nonsynonymous","I2H C61G D97L",3
"lib1","SARS-CoV-2","ATGACTAGAGATCAGT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","V103D P149* P177F",3
"lib1","SARS-CoV-2","ATGACTAGATTGTCGC",2,0.44,NA,NA,NA,NA,NA,NA,"stop","T15F D68* S129C N171W",4
"lib1","SARS-CoV-2","ATGACTAGCCTTGTGG",2,58.67,9.69,-1.07,0.11,1.94,1.07,0,">1 nonsynonymous","E10A F62L D90V",3
"lib1","SARS-CoV-2","ATGACTATTACACTTG",7,7.17,6.83,-3.93,0.54,1.5,1.07,0.05,">1 nonsynonymous","L5S F17S S43L Y50P I104K Y119M R179N",7
"lib1","SARS-CoV-2","ATGACTCAAAGCACCT",3,21.67,10.79,0.03,0.03,2.95,1.02,0,">1 nonsynonymous","Y39R S53Q N110T Q163F",4
"lib1","SARS-CoV-2","ATGACTCAAGTTCCCA",5,8.95,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","V65L I80Y T201V",3
"lib1","SARS-CoV-2","ATGACTCAGATTAACG",1,9.3,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A18I L95F N107R",3
"lib1","SARS-CoV-2","ATGACTCATAAGTATC",2,65.41,10.66,-0.1,0.05,2.95,1.04,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","ATGACTCATGACAGTG",4,36,9.52,-1.25,0.2,1.85,1.18,0.01,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","ATGACTCATTCAGCAA",4,6.16,NA,NA,NA,NA,NA,NA,"stop","A42T G83* Q144A P177F",4
"lib1","SARS-CoV-2","ATGACTCCAGATCAAG",3,297.02,9.3,-1.46,0.07,2.78,1.1,0,">1 nonsynonymous","T55E Y119L",2
"lib1","SARS-CoV-2","ATGACTCGCACCTACG",1,29.21,10.51,-0.25,0.07,2.97,1,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","ATGACTCGCTTACTCT",3,63.9,6,-4.76,2,3,1.23,0.01,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","ATGACTCGGAATCAAT",1,32.34,10.35,-0.41,0.05,2.88,1,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","ATGACTCGGTACGACA",2,11.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35D D90F T100W D137I S147L",5
"lib1","SARS-CoV-2","ATGACTCTATTATGAT",3,2.52,NA,NA,NA,NA,NA,NA,"stop","F17D N58I I104* E154F",4
"lib1","SARS-CoV-2","ATGACTCTATTGTAAG",1,49.26,8.56,-2.2,0.23,1.5,1,0.03,">1 nonsynonymous","S43E Y91S T100H G116F",4
"lib1","SARS-CoV-2","ATGACTCTCAACACAT",5,191.26,8.73,-2.04,0.14,2.21,1.12,0.01,">1 nonsynonymous","G83T N118R",2
"lib1","SARS-CoV-2","ATGACTCTCTGCAGTA",4,43.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33K E76Y T100S F167R",4
"lib1","SARS-CoV-2","ATGACTCTTTCCTTGC",1,5.34,10.69,-0.07,0.05,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGACTGAACCTTAAA",4,34.21,10.33,-0.43,0.09,2.58,1.07,0,">1 nonsynonymous","A67F P149L",2
"lib1","SARS-CoV-2","ATGACTGAAGCACGAT",3,10.89,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89W I142Y",2
"lib1","SARS-CoV-2","ATGACTGAGTAGTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","S43* T63P V77L I88* V115R",5
"lib1","SARS-CoV-2","ATGACTGTAAAAATGT",3,38.78,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N107F G166L",2
"lib1","SARS-CoV-2","ATGACTTAACCGAACA",4,158.65,10.74,-0.02,0.07,2.85,1.09,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","ATGACTTAAGCCATAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","Y91L T100*",2
"lib1","SARS-CoV-2","ATGACTTACTCCTTAT",3,2.17,NA,NA,NA,NA,NA,NA,"stop","L38H Q84L W106*",3
"lib1","SARS-CoV-2","ATGACTTAGAATATGT",4,84.27,8.71,-2.05,0.22,1.78,1.1,0.02,">1 nonsynonymous","N130L F167L",2
"lib1","SARS-CoV-2","ATGACTTCATTCAACA",2,57.95,8.92,-1.84,0.11,2.4,1.15,0.01,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","ATGACTTCCCTCCCAA",2,54.85,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8L S41T Y93V N118S",4
"lib1","SARS-CoV-2","ATGACTTCTGCTAAAC",1,0.21,NA,NA,NA,NA,NA,NA,"stop","V77I F99L A105W S113T G166*",5
"lib1","SARS-CoV-2","ATGACTTGGAAAATTC",7,63.26,10.72,-0.05,0.1,2.9,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATGACTTTAAGAGGGC",4,65.07,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16F A89R G174I",3
"lib1","SARS-CoV-2","ATGACTTTGGCTTGTA",10,74.84,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y50S N58I I88N T100Y K114N",5
"lib1","SARS-CoV-2","ATGACTTTGTAGCATG",5,26.03,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N1Q F62R Q144L C150F",4
"lib1","SARS-CoV-2","ATGAGAAAAAGCAATT",3,113.82,9.99,-0.78,0.11,2.32,1.01,0.01,">1 nonsynonymous","I88V Q176N",2
"lib1","SARS-CoV-2","ATGAGAAAACTTAAAC",1,35.03,8.5,-2.26,0.12,2.76,1.1,0.01,">1 nonsynonymous","V37W G116E G146V",3
"lib1","SARS-CoV-2","ATGAGAAACCAGAGAG",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V V37W K48S",3
"lib1","SARS-CoV-2","ATGAGAACCTCGTTGT",3,77.68,10.71,-0.05,0.07,2.76,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGAGAAGATACATAC",1,15.77,10.15,-0.62,0.21,1.75,1.11,0.02,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","ATGAGAAGGAGATAAG",3,51.65,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I142K P161Y",2
"lib1","SARS-CoV-2","ATGAGAAGGCCGACAT",5,49.08,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23E C49G N107P Y119S V173S",5
"lib1","SARS-CoV-2","ATGAGAATCGACCGCT",4,72.81,8.9,-1.86,0.05,2.85,1.05,0,">1 nonsynonymous","G116S L125Y",2
"lib1","SARS-CoV-2","ATGAGAATTCATAACG",5,91.32,10.69,-0.08,0.08,2.83,1.13,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","ATGAGACAGAACTTTC",16,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V E76I P197N",3
"lib1","SARS-CoV-2","ATGAGACCAGTAATAG",1,1.07,NA,NA,NA,NA,NA,NA,"stop","F12N V65* F99H Q163S",4
"lib1","SARS-CoV-2","ATGAGACCATCATTCA",2,57.54,10.77,0.01,0.05,2.97,1.04,0,"1 nonsynonymous","R78C",1
"lib1","SARS-CoV-2","ATGAGACTCGTCACCG",1,16.82,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A42Q D68A F99R C195S",4
"lib1","SARS-CoV-2","ATGAGACTGTTAGAGA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","ATGAGACTTAGCGCCT",1,8.93,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","N13H F44S T85S G101P",4
"lib1","SARS-CoV-2","ATGAGAGAATAGCAAT",6,53.58,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6H D98Y N107T Y178R",4
"lib1","SARS-CoV-2","ATGAGAGATATGGAAT",1,8.05,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F47S D98I",2
"lib1","SARS-CoV-2","ATGAGAGCAGTTCAAT",6,69.77,10.3,-0.47,0.07,2.77,1.06,0,">1 nonsynonymous","L60C I142H",2
"lib1","SARS-CoV-2","ATGAGAGCATCATCTG",1,14.42,9.26,-1.51,0.2,1.77,1.06,0.02,">1 nonsynonymous","Q84W D90H",2
"lib1","SARS-CoV-2","ATGAGAGGACCCAAAT",3,40.52,9.82,-0.95,0.14,2.29,1.02,0.01,"1 nonsynonymous","F8P",1
"lib1","SARS-CoV-2","ATGAGAGGCACAAATG",15,144.03,9.47,-1.3,0.06,2.78,1.09,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","ATGAGAGTTAAACCTT",8,2.22,NA,NA,NA,NA,NA,NA,"stop","S41M F47* V173C",3
"lib1","SARS-CoV-2","ATGAGATAATAAAACG",2,62.46,9.77,-1,0.13,2.12,1.14,0.01,">1 nonsynonymous","L5V D59P G116P I138C",4
"lib1","SARS-CoV-2","ATGAGATAGCGGCCGA",10,32.97,6.13,-4.64,0.85,1.5,1.2,0.02,">1 nonsynonymous","T3L K26C C49G P96D",4
"lib1","SARS-CoV-2","ATGAGATCAAGATGCT",3,51.61,10.7,-0.06,0.06,2.92,1.04,0,">1 nonsynonymous","N120I P197Y",2
"lib1","SARS-CoV-2","ATGAGATCCCATAAGG",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103A S139L",2
"lib1","SARS-CoV-2","ATGAGATCGCATCCTT",7,117.28,10.12,-0.64,0.09,2.42,1.05,0,">1 nonsynonymous","L57Y N120S F160A",3
"lib1","SARS-CoV-2","ATGAGATTAATTCATG",5,30.78,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6T C61W I88G",3
"lib1","SARS-CoV-2","ATGAGATTATACAGAG",4,8.42,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y21M Y91R D97R G146R F160T S184L",6
"lib1","SARS-CoV-2","ATGAGATTCTGCCAAA",4,63.81,10.27,-0.5,0.05,2.83,1,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","ATGAGATTTGAGCCTA",4,16.17,9.91,-0.86,0.32,2.05,1.03,0.02,">1 nonsynonymous","P54G Q144L",2
"lib1","SARS-CoV-2","ATGAGCAAAAAAGTAA",2,21.92,10.62,-0.14,0.09,2.8,1.05,0,">1 nonsynonymous","S53K S139K",2
"lib1","SARS-CoV-2","ATGAGCAAAATTGTAC",11,206.08,10.51,-0.26,0.03,2.93,1,0,">1 nonsynonymous","E10K N64K T201K",3
"lib1","SARS-CoV-2","ATGAGCAAAGCATAGC",1,7.23,10.76,0,0.04,3,1,0,"1 nonsynonymous","L162M",1
"lib1","SARS-CoV-2","ATGAGCAACCAGTATA",3,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39C C61H V153L",3
"lib1","SARS-CoV-2","ATGAGCAGAACAGGCG",1,40.01,10.48,-0.28,0.06,2.87,1,0,">1 nonsynonymous","N1R N64R Q84S D90S",4
"lib1","SARS-CoV-2","ATGAGCAGTAAGACGT",2,41.06,10.79,0.03,0.08,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAGCATTGAATGGT",4,48.42,8.86,-1.9,0.15,2.08,1.11,0.01,">1 nonsynonymous","P54M Y143L E186F",3
"lib1","SARS-CoV-2","ATGAGCATTTGATTAT",2,21.97,7.63,-3.13,0.3,1.64,1.15,0.03,">1 nonsynonymous","I2T Y175T",2
"lib1","SARS-CoV-2","ATGAGCCACAGAACAT",1,49.24,8.6,-2.16,0.11,1.69,1.14,0.01,">1 nonsynonymous","I28L A81V N107R",3
"lib1","SARS-CoV-2","ATGAGCCCTCAGACCA",6,35.18,8.52,-2.24,0.11,2.18,1.1,0,">1 nonsynonymous","Y35L T55S D90F N120E G146F",5
"lib1","SARS-CoV-2","ATGAGCCGACATGCCA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","C49S R136A A145T T201*",4
"lib1","SARS-CoV-2","ATGAGCCGAGAGGTAG",2,39.55,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","ATGAGCCGTTAAGACA",1,66.79,10.32,-0.44,0.03,2.92,1.06,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","ATGAGCCGTTACGTTC",6,53.11,6,-4.76,1.4,1.5,1.28,0.04,">1 nonsynonymous","G152N V181S",2
"lib1","SARS-CoV-2","ATGAGCCTATTATACA",5,34.65,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N4M I28M N40I V103C G146L",5
"lib1","SARS-CoV-2","ATGAGCCTCACAAAAC",7,68.73,10.36,-0.4,0.05,2.92,1.03,0,">1 nonsynonymous","C61T K87W",2
"lib1","SARS-CoV-2","ATGAGCGACTATAACT",7,10.92,6.42,-4.34,2,1.5,1.09,0.05,">1 nonsynonymous","D34T S43Y Y50H F134M V182K",5
"lib1","SARS-CoV-2","ATGAGCGGAGAGCATG",1,93.84,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G155D P169G Q176T",3
"lib1","SARS-CoV-2","ATGAGCGGGGCTATAC",7,63.29,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18I R124H G174Y",3
"lib1","SARS-CoV-2","ATGAGCTCCGATATTA",4,56.86,10.66,-0.1,0.04,2.9,1.04,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","ATGAGCTGAATCATAC",13,153.72,9.38,-1.38,0.08,2.7,1.1,0,">1 nonsynonymous","Y66H G146T",2
"lib1","SARS-CoV-2","ATGAGCTTGTTACCCT",1,63.31,9.81,-0.96,0.11,2.27,1.05,0,">1 nonsynonymous","P54S Y91N F126V",3
"lib1","SARS-CoV-2","ATGAGGAAATGGCGAA",3,76.12,10.33,-0.43,0.08,2.99,1,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","ATGAGGAACCGGATAC",4,32.26,10.8,0.03,0.06,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAGGACAGCAAAGT",3,26.4,10.72,-0.04,0.06,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAGGACGACGCTGC",2,1,NA,NA,NA,NA,NA,NA,"stop","G51L D59S D90M V103* T148F",5
"lib1","SARS-CoV-2","ATGAGGATAAAGGAAT",1,6.4,11.04,0.28,0.08,2.99,1,0,">1 nonsynonymous","L122K I142F",2
"lib1","SARS-CoV-2","ATGAGGATTTTTTCAA",6,47.59,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","K87T Y121F R179D P197Q",4
"lib1","SARS-CoV-2","ATGAGGCAATAAAGAA",7,136.54,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K26V C49Y Y91D P177K H189P",5
"lib1","SARS-CoV-2","ATGAGGCATTTCCACT",2,43.99,10.82,0.05,0.08,2.93,1.04,0,"1 nonsynonymous","H189R",1
"lib1","SARS-CoV-2","ATGAGGCCCAAAATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37D V52* A81R G152M F156G Y165S",6
"lib1","SARS-CoV-2","ATGAGGCCGACCTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C V103S N157K",3
"lib1","SARS-CoV-2","ATGAGGCGATGCTCCA",3,46.19,9.91,-0.85,0.12,2.61,1.07,0.01,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","ATGAGGCGGATAAGTC",1,41.18,9.07,-1.69,0.08,2.78,1.15,0,">1 nonsynonymous","Y35L N58F F156E",3
"lib1","SARS-CoV-2","ATGAGGCGTTGACACA",5,164.14,7,-3.77,0.15,1.53,1.14,0,">1 nonsynonymous","G116S Y143R",2
"lib1","SARS-CoV-2","ATGAGGGTGCTTAAAG",2,22.82,6,-4.76,1.7,1.5,1.17,0.01,">1 nonsynonymous","I88N G166F",2
"lib1","SARS-CoV-2","ATGAGGTAAAATATAT",1,30.83,8.49,-2.28,0.15,2.57,1.07,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","ATGAGGTATACGAATA",2,55.7,10.8,0.04,0.07,2.89,1.04,0,">1 nonsynonymous","K56Y L122R",2
"lib1","SARS-CoV-2","ATGAGGTCGGGTGTTA",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S V37R Y178V",3
"lib1","SARS-CoV-2","ATGAGGTCTACAATTC",4,2.46,NA,NA,NA,NA,NA,NA,"stop","L5D T100*",2
"lib1","SARS-CoV-2","ATGAGGTGCGCCCCCA",11,195.62,10.32,-0.44,0.04,2.81,1.04,0,">1 nonsynonymous","A33R A42H K128S",3
"lib1","SARS-CoV-2","ATGAGGTGTATAAACT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","E10L L57* N64V Q84K S184A",5
"lib1","SARS-CoV-2","ATGAGGTTGAAGACTG",6,3.08,NA,NA,NA,NA,NA,NA,"stop","S69* V77T G174V",3
"lib1","SARS-CoV-2","ATGAGTAACGAGGCTA",3,160.4,10.09,-0.67,0.06,2.71,1.01,0,">1 nonsynonymous","V32S P54V F185I A190V",4
"lib1","SARS-CoV-2","ATGAGTAAGAAAAAAT",4,32.78,6,-4.76,0.64,1.5,1.1,0,">1 nonsynonymous","G86L F167G",2
"lib1","SARS-CoV-2","ATGAGTAATAAAGGAC",11,109.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105V Q176R",2
"lib1","SARS-CoV-2","ATGAGTAATCATAATC",21,167.76,8.43,-2.34,0.16,1.5,1.17,0.01,">1 nonsynonymous","R136D C195G",2
"lib1","SARS-CoV-2","ATGAGTACAAGCGATT",7,66.67,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43G G86V D98H K132E",4
"lib1","SARS-CoV-2","ATGAGTACTAAAACAC",4,8.19,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15L E76S D90F",3
"lib1","SARS-CoV-2","ATGAGTACTATAATGT",2,0,NA,NA,NA,NA,NA,NA,"stop","F8Y S19R T55L Y178*",4
"lib1","SARS-CoV-2","ATGAGTACTTGTCACC",4,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q V20M F62Y L183P",4
"lib1","SARS-CoV-2","ATGAGTAGCGTAGACT",2,6.45,6,-4.76,2,3,1,0,">1 nonsynonymous","E76S N130F G146W",3
"lib1","SARS-CoV-2","ATGAGTATAAATTGTA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","L5* D59T F99I",3
"lib1","SARS-CoV-2","ATGAGTATATAAATGA",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M R179Q",2
"lib1","SARS-CoV-2","ATGAGTCAATCTGATG",1,2.99,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","ATGAGTCCTTCAATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70S K87R",2
"lib1","SARS-CoV-2","ATGAGTCGTCATAAAG",8,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W F44I",2
"lib1","SARS-CoV-2","ATGAGTCTTTGAATCG",4,21.1,10.3,-0.47,0.1,2.87,1.05,0,">1 nonsynonymous","Y91S Q168F",2
"lib1","SARS-CoV-2","ATGAGTGACTAAGTTT",6,111.59,10.75,-0.01,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGAGTGCGTTCTGTC",7,49.5,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y35A I72E T85Q",3
"lib1","SARS-CoV-2","ATGAGTGGGGATTTTG",4,18.27,8.4,-2.36,0.18,2.87,1.08,0.01,">1 nonsynonymous","Q84E Q168K",2
"lib1","SARS-CoV-2","ATGAGTTAACCTCCCG",4,100.92,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37A L95C W106N",3
"lib1","SARS-CoV-2","ATGAGTTACATTATTT",3,45.15,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","P7L G51L D75W N107G K132R T170I",6
"lib1","SARS-CoV-2","ATGAGTTATAAACATA",2,1.42,NA,NA,NA,NA,NA,NA,"stop","A14L Y91M N107W Y119T A192*",5
"lib1","SARS-CoV-2","ATGAGTTCATGTCTGG",1,2.16,NA,NA,NA,NA,NA,NA,"stop","K26* S69W G83S D90C W106V",5
"lib1","SARS-CoV-2","ATGAGTTCATTTTATA",7,155.6,10.75,-0.01,0.05,2.92,1.04,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","ATGAGTTCGGGACACC",4,30.82,10.57,-0.19,0.09,2.95,1.04,0,">1 nonsynonymous","A33P T63S T201D",3
"lib1","SARS-CoV-2","ATGAGTTCGTAACGGC",8,219.95,10.15,-0.62,0.03,2.87,1.02,0,">1 nonsynonymous","S41N G74H",2
"lib1","SARS-CoV-2","ATGAGTTCTACGGGGC",3,1.83,NA,NA,NA,NA,NA,NA,"stop","D34K V65* D97Y N157S",4
"lib1","SARS-CoV-2","ATGAGTTGTATAACGG",4,57.39,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N58C N92V",2
"lib1","SARS-CoV-2","ATGAGTTTTAGACCTA",3,1.07,NA,NA,NA,NA,NA,NA,"stop","A81* G116* R127C",3
"lib1","SARS-CoV-2","ATGAGTTTTTCTGTTA",2,36.91,10.5,-0.27,0.06,2.89,1.01,0,">1 nonsynonymous","L5F D98Y",2
"lib1","SARS-CoV-2","ATGATAAAACCAGCAA",2,23.87,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14D C49T Y123T G152L Q176K",5
"lib1","SARS-CoV-2","ATGATAAACACAACAA",7,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122P G146Q",2
"lib1","SARS-CoV-2","ATGATAAACCTCTGTC",1,6.6,10.68,-0.08,0.09,2.99,1,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","ATGATAAACGACGAAA",3,66.77,10.65,-0.11,0.06,2.92,1,0,"1 nonsynonymous","P7G",1
"lib1","SARS-CoV-2","ATGATAAACTAGCATA",1,17.71,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S19P D97S V103Q",3
"lib1","SARS-CoV-2","ATGATAAACTATTGCA",7,109.05,6,-4.76,1.69,1.5,1.18,0.01,">1 nonsynonymous","R16L D90Y R124H R127A",4
"lib1","SARS-CoV-2","ATGATAAAGATACTTA",6,69.67,8.32,-2.45,0.19,2.42,1.16,0.01,">1 nonsynonymous","R16Y N118T T170C",3
"lib1","SARS-CoV-2","ATGATAAAGCTAACAC",2,18.67,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","F44S T85C C102L L131S",4
"lib1","SARS-CoV-2","ATGATAAAGGGTAATA",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Y V103N",2
"lib1","SARS-CoV-2","ATGATAACAAATAATA",3,51.58,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N64S D68W P169T",3
"lib1","SARS-CoV-2","ATGATAACAGTACTCA",11,167.2,10.49,-0.28,0.05,2.91,1.01,0,">1 nonsynonymous","S45A C61F",2
"lib1","SARS-CoV-2","ATGATAACCCACTGAA",6,114.44,8.81,-1.96,0.21,1.86,1.18,0.02,">1 nonsynonymous","D98S P169W Y178N",3
"lib1","SARS-CoV-2","ATGATAACCGAATGAG",3,56.03,9.81,-0.95,0.07,2.64,1.06,0,">1 nonsynonymous","C6D S53A V173C",3
"lib1","SARS-CoV-2","ATGATAACGCGCTTGC",6,35.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14L G51Y N64W K199Q",4
"lib1","SARS-CoV-2","ATGATAAGAATGGCGA",9,49.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39A F99R G116S Y123K P197L",5
"lib1","SARS-CoV-2","ATGATAAGCAGAACCA",6,169.05,6,-4.76,1.42,1.5,1.22,0.01,">1 nonsynonymous","F99L R124K",2
"lib1","SARS-CoV-2","ATGATAAGGTTCATTG",4,20.36,10.49,-0.27,0.15,2.66,1.12,0.02,"1 nonsynonymous","T140L",1
"lib1","SARS-CoV-2","ATGATAAGGTTGCAAT",10,75.82,9.07,-1.69,0.17,1.65,1.15,0.01,">1 nonsynonymous","G9Q P96L T201R",3
"lib1","SARS-CoV-2","ATGATAAGTGCCGCGA",1,15.65,6.03,-4.73,0.41,1.87,1.12,0,">1 nonsynonymous","S36N G51F P96W T148R",4
"lib1","SARS-CoV-2","ATGATAATCCCTTTGG",3,103.9,9.38,-1.39,0.07,2.85,1.1,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","ATGATAATTAACAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5D W23* V37R D90L L111M C150E H189S T201V",8
"lib1","SARS-CoV-2","ATGATAATTAAGAACG",4,18.19,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A67N V153G",2
"lib1","SARS-CoV-2","ATGATACAACTACGCG",11,606.83,10.45,-0.31,0.03,2.91,1.03,0,">1 nonsynonymous","A14N V37G C61Q",3
"lib1","SARS-CoV-2","ATGATACAATTGCGGG",4,41.25,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","P7I V20L Y35V G152C",4
"lib1","SARS-CoV-2","ATGATACATAAATTCA",9,124.11,10.67,-0.09,0.07,2.87,1.03,0,">1 nonsynonymous","Y35V P197T",2
"lib1","SARS-CoV-2","ATGATACCACACATAC",4,30.12,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","S19R S41T L95M N107Y",4
"lib1","SARS-CoV-2","ATGATACCATCACCAA",1,44.78,10.64,-0.13,0.11,2.78,1.12,0,">1 nonsynonymous","K48R N151C",2
"lib1","SARS-CoV-2","ATGATACCCGAAACGG",12,47.32,7.83,-2.94,0.19,1.5,1.12,0.01,">1 nonsynonymous","S43C N58I Y123N",3
"lib1","SARS-CoV-2","ATGATACCGAAAAAAC",8,107.37,8.44,-2.33,0.12,2.53,1.09,0,">1 nonsynonymous","P7A G155P G174R",3
"lib1","SARS-CoV-2","ATGATACCTAGAATCC",2,6.11,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","G83Y K87W L95M V103R R124V",5
"lib1","SARS-CoV-2","ATGATACCTCGAACCT",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31P Y91A T100A F134E P177R",5
"lib1","SARS-CoV-2","ATGATACCTGGATGTT",1,16.42,10.38,-0.38,0.1,3,1,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","ATGATACCTTCCACGA",5,0.75,NA,NA,NA,NA,NA,NA,"stop","F99* S200M",2
"lib1","SARS-CoV-2","ATGATACGAAATACGG",6,17.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4W A42I P82K Q168L T201I",5
"lib1","SARS-CoV-2","ATGATACGAGCAAACC",1,10.43,10.76,0,0.23,2.7,1.05,0.02,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","ATGATACGCGGACACA",2,105.16,10.78,0.02,0.06,2.93,1.05,0,">1 nonsynonymous","P54R K198E",2
"lib1","SARS-CoV-2","ATGATACGTCAAACGC",5,54.84,6.19,-4.58,0.67,1.5,1.13,0.02,">1 nonsynonymous","G9A L122W R179M",3
"lib1","SARS-CoV-2","ATGATACTAACCAGTA",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I V77Q V103A S113W Q168L V173F",6
"lib1","SARS-CoV-2","ATGATACTACCCTGCG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","T3* N13S F62G N171I T201R",5
"lib1","SARS-CoV-2","ATGATACTATCGCAAT",2,26.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T63S E76S G86K Y123M",5
"lib1","SARS-CoV-2","ATGATACTGGTTTTGT",4,0.03,NA,NA,NA,NA,NA,NA,"stop","A22L L122*",2
"lib1","SARS-CoV-2","ATGATAGAAAAAATCA",4,47.22,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F99M N107T N120V P177S",4
"lib1","SARS-CoV-2","ATGATAGAAGGAGTGT",11,72.86,6.02,-4.74,0.87,1.5,1.17,0.01,">1 nonsynonymous","R25S S113P",2
"lib1","SARS-CoV-2","ATGATAGAAGTTGCTG",8,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R F99S A105L",3
"lib1","SARS-CoV-2","ATGATAGACATAAATT",5,69.04,9.29,-1.48,0.08,2.57,1.13,0,">1 nonsynonymous","K87G N107P",2
"lib1","SARS-CoV-2","ATGATAGACGGATGTT",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F G74P",2
"lib1","SARS-CoV-2","ATGATAGACTCATCGA",2,15.9,10.27,-0.5,0.1,2.68,1,0,">1 nonsynonymous","G116Q S164W",2
"lib1","SARS-CoV-2","ATGATAGATAATCTTA",4,28.7,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","V103A G146F",2
"lib1","SARS-CoV-2","ATGATAGATCTAGATG",9,0.83,NA,NA,NA,NA,NA,NA,"stop","E135I P149E G155N T170*",4
"lib1","SARS-CoV-2","ATGATAGCTATGTGAC",8,41.97,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V37E I104E D137S",3
"lib1","SARS-CoV-2","ATGATAGGAGTCAATA",9,54.46,9.25,-1.51,0.24,1.56,1.11,0.02,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","ATGATAGGTAGACTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","V65R Q79* D97H W106M K114V P149H",6
"lib1","SARS-CoV-2","ATGATAGGTTAATTTC",1,38.97,10.45,-0.32,0.08,2.94,1,0,"1 nonsynonymous","Y35C",1
"lib1","SARS-CoV-2","ATGATAGTATTGTCAA",2,6.31,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S19Y S41V D90I D98V",4
"lib1","SARS-CoV-2","ATGATAGTGCACATAC",8,2.63,NA,NA,NA,NA,NA,NA,"stop","G9E L95R C102* R127G G146C V181R",6
"lib1","SARS-CoV-2","ATGATATAACAAGTAC",11,3.57,NA,NA,NA,NA,NA,NA,"stop","A33S D98L K114* F134* F156M",5
"lib1","SARS-CoV-2","ATGATATACAGCAGAC",2,17.99,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","A81H D90R R136C",3
"lib1","SARS-CoV-2","ATGATATACCAGCAAA",3,51.03,10.52,-0.24,0.07,2.81,1.09,0,">1 nonsynonymous","G116V K199T",2
"lib1","SARS-CoV-2","ATGATATAGTTGGAGC",4,16.14,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","D68M A105N S139T",3
"lib1","SARS-CoV-2","ATGATATCATAATTAC",4,60.78,8.28,-2.48,0.18,2.19,1.14,0.01,">1 nonsynonymous","F8M R16Q F47R L122A T170H",5
"lib1","SARS-CoV-2","ATGATATCGAAATACG",2,0.5,NA,NA,NA,NA,NA,NA,"stop","S69F D90H R127*",3
"lib1","SARS-CoV-2","ATGATATGAATAATCT",6,121.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71G",1
"lib1","SARS-CoV-2","ATGATATGCATGTCAG",5,101.04,10.79,0.03,0.07,2.96,1.02,0,"1 nonsynonymous","S43L",1
"lib1","SARS-CoV-2","ATGATATGGCGGATAC",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R L125V",2
"lib1","SARS-CoV-2","ATGATATGGTCAAAAT",1,35.77,9.93,-0.84,0.16,1.67,1.05,0.01,">1 nonsynonymous","A18I Y123L",2
"lib1","SARS-CoV-2","ATGATATTTAGTGACT",2,57.12,10.92,0.15,0.1,2.88,1.04,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","ATGATATTTCACTACC",1,395.56,8.92,-1.84,0.19,1.5,1,0.02,">1 nonsynonymous","G51E F134T",2
"lib1","SARS-CoV-2","ATGATATTTCCTTTTG",4,32.59,10.71,-0.06,0.11,2.85,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATGATATTTTGAATAG",8,37.53,7.58,-3.18,0.36,1.5,1.12,0.05,">1 nonsynonymous","R16S A89R E141W",3
"lib1","SARS-CoV-2","ATGATCAACACATGAA",13,79.39,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G74P T100G V153G",3
"lib1","SARS-CoV-2","ATGATCAAGATCAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","R73M F99* S139L P169A S200W",5
"lib1","SARS-CoV-2","ATGATCAATCAACTCA",2,23.9,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G51S F99N",2
"lib1","SARS-CoV-2","ATGATCAATGATATTT",9,145.82,10.74,-0.03,0.06,2.88,1.01,0,"1 nonsynonymous","L60N",1
"lib1","SARS-CoV-2","ATGATCACCATACGTA",3,2.32,NA,NA,NA,NA,NA,NA,"stop","L60S P96* A105F",3
"lib1","SARS-CoV-2","ATGATCAGCTAGTTAC",8,18.86,6.62,-4.14,0.53,1.5,1.03,0.04,">1 nonsynonymous","N40Y N92H V173I",3
"lib1","SARS-CoV-2","ATGATCATAAGAACTT",4,112.04,8.35,-2.42,0.16,1.86,1.12,0.01,">1 nonsynonymous","G83L D97W Y119M V173F",4
"lib1","SARS-CoV-2","ATGATCATATAACTCT",3,0.41,NA,NA,NA,NA,NA,NA,"stop","C6* V52Y N110* P149R P169L",5
"lib1","SARS-CoV-2","ATGATCATGTAACGAC",11,26.22,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","F99P T148Q L183G",3
"lib1","SARS-CoV-2","ATGATCATTTTACACA",5,1.5,NA,NA,NA,NA,NA,NA,"stop","L38G R78L N107W Y123* T148P",5
"lib1","SARS-CoV-2","ATGATCCAAATCAATT",2,24.73,9.59,-1.17,0.18,1.91,1.05,0.01,">1 nonsynonymous","E10R D98E R136M",3
"lib1","SARS-CoV-2","ATGATCCAACAATGAT",5,19.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K56T Q84N P96L T201N",4
"lib1","SARS-CoV-2","ATGATCCAAGTAACTG",8,279.81,10.33,-0.44,0.04,2.91,1.04,0,"1 nonsynonymous","L125A",1
"lib1","SARS-CoV-2","ATGATCCAATCAAATG",8,210.71,10.7,-0.06,0.05,2.9,1.04,0,">1 nonsynonymous","V153C F160Y",2
"lib1","SARS-CoV-2","ATGATCCATAATAAAA",4,68.79,10.36,-0.41,0.05,2.93,1,0,">1 nonsynonymous","T55L T63V D90A",3
"lib1","SARS-CoV-2","ATGATCCGAACAAGAC",8,0.05,NA,NA,NA,NA,NA,NA,"stop","L95* L125V V194I",3
"lib1","SARS-CoV-2","ATGATCCTAAGTTCAA",1,12.62,10.69,-0.07,0.07,3,1.01,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","ATGATCCTCATTTGAG",3,3.04,NA,NA,NA,NA,NA,NA,"stop","A33* D90M F99A N120G",4
"lib1","SARS-CoV-2","ATGATCGAAAAAATAC",1,19.18,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","G116L Y123D E154Y V181G",4
"lib1","SARS-CoV-2","ATGATCGAAACTATCC",2,24.52,10.02,-0.74,0.13,2.68,1.03,0.01,">1 nonsynonymous","A14I F62C Q84K",3
"lib1","SARS-CoV-2","ATGATCGAGAAAACAT",3,59.96,8.35,-2.41,0.17,1.5,1.13,0.01,">1 nonsynonymous","D68T Q144R",2
"lib1","SARS-CoV-2","ATGATCGTGATATACA",2,13.56,10.2,-0.56,0.07,2.93,1,0,">1 nonsynonymous","T140H Q168M",2
"lib1","SARS-CoV-2","ATGATCGTTAGAAGTT",6,31.64,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V20G R124Y",2
"lib1","SARS-CoV-2","ATGATCTAAACAGAAA",4,58.55,10.85,0.08,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATCTACTAATAAT",5,99.25,10.42,-0.34,0.04,2.89,1,0,">1 nonsynonymous","K26S K132G",2
"lib1","SARS-CoV-2","ATGATCTAGGCTCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12H D75Y N151Q C158*",4
"lib1","SARS-CoV-2","ATGATCTAGTAGGGAC",1,57.11,10.01,-0.75,0.09,2.52,1.01,0,">1 nonsynonymous","A14C L38M S200E",3
"lib1","SARS-CoV-2","ATGATCTCATAACTTA",4,56.28,10.32,-0.44,0.08,2.9,1.02,0,">1 nonsynonymous","K48N L122H G166A",3
"lib1","SARS-CoV-2","ATGATCTGAATGCAAG",2,15.56,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C31G C49R K56I D90R",4
"lib1","SARS-CoV-2","ATGATCTTATTACAGT",8,130.82,10.73,-0.03,0.07,2.89,1.08,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATGATCTTGTCTTTTT",11,41.75,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12V D34S N107T L122G G146H",5
"lib1","SARS-CoV-2","ATGATCTTTTTTTTTC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I L57E I104Y N109L T201A",5
"lib1","SARS-CoV-2","ATGATGAAAATCAATC",8,39.19,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","W106A G146C",2
"lib1","SARS-CoV-2","ATGATGAAACACTAAG",1,15.88,6.95,-3.81,0.5,1.5,1.11,0.06,">1 nonsynonymous","S43I K56Y D90S D137H Q163Y",5
"lib1","SARS-CoV-2","ATGATGAACGTTGGCG",2,86.86,9.45,-1.32,0.05,2.86,1.07,0,"1 nonsynonymous","G174V",1
"lib1","SARS-CoV-2","ATGATGAAGAGAGGTG",2,18.92,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C49G L57G N107M F167I Y178M",5
"lib1","SARS-CoV-2","ATGATGACAGATACTA",8,0.15,NA,NA,NA,NA,NA,NA,"stop","C49P A67S D97* R127A R136E P149D",6
"lib1","SARS-CoV-2","ATGATGACTAATTAAT",4,67.17,9.68,-1.08,0.06,2.83,1.04,0,">1 nonsynonymous","N4L P169Q",2
"lib1","SARS-CoV-2","ATGATGAGAGATCAGA",4,110.44,10.81,0.04,0.09,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATGAGATCTAATA",5,72.23,9.18,-1.59,0.17,1.5,1.17,0.01,">1 nonsynonymous","I28R T46I",2
"lib1","SARS-CoV-2","ATGATGAGCAGCAAAT",6,38.93,10.43,-0.33,0.08,2.84,1.07,0,">1 nonsynonymous","K87C T201K",2
"lib1","SARS-CoV-2","ATGATGATACAGGGAA",4,39.85,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","W23R L57G D112A",3
"lib1","SARS-CoV-2","ATGATGCAAGATTAGT",7,51.89,6.03,-4.73,1.17,1.5,1.19,0.02,">1 nonsynonymous","C6P Y35G T85L R179M T201E",5
"lib1","SARS-CoV-2","ATGATGCACTGCACGT",5,66.3,10.22,-0.54,0.04,2.9,1.01,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","ATGATGCAGGAATGAG",3,31.79,10.11,-0.66,0.13,2.86,1.01,0.01,">1 nonsynonymous","F44E E141R",2
"lib1","SARS-CoV-2","ATGATGCCAGTTACAC",5,54.52,8.55,-2.21,0.15,1.76,1.17,0.01,">1 nonsynonymous","N4C S41L D90N N118C",4
"lib1","SARS-CoV-2","ATGATGCCTCCAAGCA",1,22.97,6.58,-4.18,0.73,1.5,1.09,0.07,">1 nonsynonymous","S113W Y119R D137T G146S",4
"lib1","SARS-CoV-2","ATGATGCGATTAGGCT",1,35.82,10.25,-0.51,0.08,2.68,1.02,0,">1 nonsynonymous","I2Y R27M Y66C N120M",4
"lib1","SARS-CoV-2","ATGATGCGCACTCAGC",4,46.92,10.77,0,0.06,2.91,1.05,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","ATGATGCTCAAAATCT",1,7.9,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F17C D59S L131W",3
"lib1","SARS-CoV-2","ATGATGCTGATAATAA",5,1.58,NA,NA,NA,NA,NA,NA,"stop","T63K V71* G86K Y143Q",4
"lib1","SARS-CoV-2","ATGATGGAAATCAAAT",2,28.26,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96D Y121V E141R",3
"lib1","SARS-CoV-2","ATGATGGAACTCACCA",3,38.16,9.67,-1.1,0.21,1.84,1.13,0.02,">1 nonsynonymous","F12V N110P E154C",3
"lib1","SARS-CoV-2","ATGATGGACGTGGGCT",1,17.63,10.71,-0.05,0.08,2.96,1.03,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","ATGATGGATCTGTAGT",4,7.21,6,-4.76,1.38,3,1.08,0.04,">1 nonsynonymous","C61R F99P V180W",3
"lib1","SARS-CoV-2","ATGATGTAAAAAGAAG",6,2.37,NA,NA,NA,NA,NA,NA,"stop","A33D L38Q F44P L57A F99T N130*",6
"lib1","SARS-CoV-2","ATGATGTAAAGACTCA",3,9.83,6.51,-4.25,0.71,1.62,1.5,0.03,">1 nonsynonymous","N40V P133R",2
"lib1","SARS-CoV-2","ATGATGTAAATGACTG",10,150.87,10.46,-0.3,0.06,2.8,1.09,0,">1 nonsynonymous","N4S F8Y I138S",3
"lib1","SARS-CoV-2","ATGATGTAACGAGCAG",4,36.82,6,-4.76,1.53,1.5,1.2,0.01,">1 nonsynonymous","F44L C102R",2
"lib1","SARS-CoV-2","ATGATGTATCCATACG",3,66.07,10.5,-0.26,0.05,2.86,1.03,0,">1 nonsynonymous","T55G N64I D97G F160R",4
"lib1","SARS-CoV-2","ATGATGTGATTAATTG",8,129.22,10.78,0.01,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATGTTCAACCTGT",3,15.02,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","F47G D90L R136W F167A",4
"lib1","SARS-CoV-2","ATGATGTTGAGGGACA",10,164.15,10.79,0.03,0.05,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGATGTTGGTACACC",2,21.61,10.95,0.18,0.18,2.85,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATGATGTTTGAAGAAC",6,45.7,10.24,-0.52,0.05,2.81,1,0,">1 nonsynonymous","N107S T148M",2
"lib1","SARS-CoV-2","ATGATTAAACATACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","ATGATTAAAGAAGTGA",1,15.85,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F17R L57C Y91A E154S Q168V",5
"lib1","SARS-CoV-2","ATGATTAAGATTGGGA",8,49.39,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","G9R S19K I72T",3
"lib1","SARS-CoV-2","ATGATTAATGATAGGA",8,2.9,NA,NA,NA,NA,NA,NA,"stop","L95* D112C P133G K199N",4
"lib1","SARS-CoV-2","ATGATTACATGCCCCA",3,189.69,6,-4.76,1.31,1.5,1.18,0.01,">1 nonsynonymous","R27T Y35L G51P G174W Q176H",5
"lib1","SARS-CoV-2","ATGATTAGACAAAGGT",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H S113Q K128C Q168S",4
"lib1","SARS-CoV-2","ATGATTAGCTGGTTAA",5,55.98,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28L F156Y V182R",3
"lib1","SARS-CoV-2","ATGATTAGGACACTCC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T15A K132* Y143P",3
"lib1","SARS-CoV-2","ATGATTATAAAATCAG",14,283.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27V Y39M L95N K132Q I142S F167G",6
"lib1","SARS-CoV-2","ATGATTATCTCAAGAA",4,25.53,6.44,-4.32,0.83,1.5,1.07,0.06,">1 nonsynonymous","K48M A81R G86F",3
"lib1","SARS-CoV-2","ATGATTATGATTACCC",1,12.44,10.86,0.09,0.11,2.87,1.14,0.01,">1 nonsynonymous","N64T K114W T201G",3
"lib1","SARS-CoV-2","ATGATTATTAGAGAAA",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57S",1
"lib1","SARS-CoV-2","ATGATTCAAGGTGAGA",3,26.13,8.74,-2.02,0.34,1.5,1.03,0.07,">1 nonsynonymous","Y93V P197S",2
"lib1","SARS-CoV-2","ATGATTCAGTCAGCCA",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L D98H P149Y",3
"lib1","SARS-CoV-2","ATGATTCATTGTCCTT",3,106.33,10.81,0.04,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATTCCTCCTCATC",6,0.14,NA,NA,NA,NA,NA,NA,"stop","S43T L60* D75G",3
"lib1","SARS-CoV-2","ATGATTCGACATATTG",9,186.86,9.16,-1.6,0.15,1.61,1.14,0.01,">1 nonsynonymous","C31M T55V A81S",3
"lib1","SARS-CoV-2","ATGATTGAAGCCTTCC",3,5.88,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S69K P82A I104V E141Y",4
"lib1","SARS-CoV-2","ATGATTGAGGCACGCT",5,37.96,10.23,-0.54,0.09,2.84,1,0,">1 nonsynonymous","E10C K26T G83F",3
"lib1","SARS-CoV-2","ATGATTGATTAGTGAG",7,76.62,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S36L Y121S N157C",3
"lib1","SARS-CoV-2","ATGATTGCAAGGTAGC",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88S Y119F",2
"lib1","SARS-CoV-2","ATGATTGGATGGTCTT",2,30.71,10.63,-0.13,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATTGGGGTGTACG",5,64.36,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10D I28T D68W F126G T140A",5
"lib1","SARS-CoV-2","ATGATTGTAGAACACG",3,130.09,10.68,-0.09,0.04,2.94,1.02,0,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","ATGATTGTTAAAGCTT",2,31.65,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","K48V G86V Y93E T100V V103A F134K E141W",7
"lib1","SARS-CoV-2","ATGATTGTTATCCCCT",2,6.64,9.1,-1.67,0.12,1.71,1.09,0.01,">1 nonsynonymous","A22I S36V T100S",3
"lib1","SARS-CoV-2","ATGATTTAACTATAGT",11,142.08,10.8,0.04,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGATTTCTTATAACG",6,59.63,9.48,-1.28,0.12,1.93,1.1,0.01,">1 nonsynonymous","W106R K114L G174S K199T",4
"lib1","SARS-CoV-2","ATGATTTGCCAAAGGA",1,6.29,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","A18L N58D S69N K87F",4
"lib1","SARS-CoV-2","ATGATTTTCCCTTATA",3,27.34,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","N30G D68N Q84M E141D C158R",5
"lib1","SARS-CoV-2","ATGATTTTTACCCGAT",2,112.37,9.86,-0.91,0.12,2.26,1.05,0.01,"1 nonsynonymous","V181M",1
"lib1","SARS-CoV-2","ATGATTTTTCGCCGAA",8,76.5,8.71,-2.06,0.26,1.5,1.03,0.03,">1 nonsynonymous","S45L Y165W",2
"lib1","SARS-CoV-2","ATGCAAAAAAATCTAA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","L5R P82* Y175R",3
"lib1","SARS-CoV-2","ATGCAAAACCAGGCAT",3,107.09,8.96,-1.8,0.11,1.78,1.13,0.01,">1 nonsynonymous","D75Y N110K P177S",3
"lib1","SARS-CoV-2","ATGCAAAACTCAACAA",5,53.92,6,-4.76,0.83,1.5,1.13,0.01,">1 nonsynonymous","S41V V65E N107S T170C P177I",5
"lib1","SARS-CoV-2","ATGCAAAACTGAAAAT",2,35.29,10.47,-0.29,0.05,2.85,1.01,0,">1 nonsynonymous","I2N A42T K94A",3
"lib1","SARS-CoV-2","ATGCAAAAGAGAAAAA",3,12.28,6.8,-3.96,0.65,1.5,1.09,0.08,">1 nonsynonymous","F70H N107Y E141K",3
"lib1","SARS-CoV-2","ATGCAAAAGTCACATT",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95S R127C",2
"lib1","SARS-CoV-2","ATGCAAAATAGCAAAT",2,9.27,10.1,-0.66,0.15,2.44,1,0.01,"1 nonsynonymous","A89I",1
"lib1","SARS-CoV-2","ATGCAAAATATTAAGC",8,20.71,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22H F99S",2
"lib1","SARS-CoV-2","ATGCAAACAGTGCCAA",2,25.68,9.96,-0.81,0.12,2.53,1.18,0.01,">1 nonsynonymous","F12V T140I",2
"lib1","SARS-CoV-2","ATGCAAACGAACAAAT",7,188.99,10.19,-0.58,0.04,2.95,1.01,0,"1 nonsynonymous","E154H",1
"lib1","SARS-CoV-2","ATGCAAACGAAGGAAG",2,10.47,10.7,-0.06,0.36,2.31,1.03,0.03,">1 nonsynonymous","N1M A42T P96K",3
"lib1","SARS-CoV-2","ATGCAAACGATAAACG",4,49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9L N58C T100P K128R C150L",5
"lib1","SARS-CoV-2","ATGCAAAGCATCAAAT",6,42.7,7.98,-2.78,0.2,1.72,1.24,0.01,">1 nonsynonymous","N13Y S29K S41N N107D",4
"lib1","SARS-CoV-2","ATGCAAAGGTACAGTT",2,0.9,NA,NA,NA,NA,NA,NA,"stop","C49Y V77K F99S V173F T201*",5
"lib1","SARS-CoV-2","ATGCAAAGTAGTAGGC",3,53.41,6,-4.76,1.95,1.5,1.24,0.03,">1 nonsynonymous","A81N C150N",2
"lib1","SARS-CoV-2","ATGCAAAGTGCAATAA",1,9.52,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C61G G101D R124H K132S",4
"lib1","SARS-CoV-2","ATGCAAATCACACTAT",7,105.4,10.45,-0.32,0.05,2.87,1.05,0,">1 nonsynonymous","V65C A145G",2
"lib1","SARS-CoV-2","ATGCAAATGATATCTG",2,24.06,10.31,-0.45,0.07,2.94,1,0,">1 nonsynonymous","I142Y P149N",2
"lib1","SARS-CoV-2","ATGCAACAATGTTCTA",6,85.05,10.72,-0.04,0.04,2.97,1.01,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","ATGCAACACATCTATC",10,156.18,10.8,0.03,0.07,2.9,1.07,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","ATGCAACCGGGGCACT",5,38.03,6.36,-4.4,0.51,1.5,1.19,0.02,">1 nonsynonymous","C6D Y123W F134L E141S",4
"lib1","SARS-CoV-2","ATGCAACGACATCACC",3,17.14,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6V A14V A33P C61R S69L",5
"lib1","SARS-CoV-2","ATGCAACGCAGATTTC",2,11.64,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6Q C61Y D98R A105L",4
"lib1","SARS-CoV-2","ATGCAACGCTCCAACT",1,10.44,10.66,-0.11,0.09,3,1,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","ATGCAACTCAAGGGTA",1,41.88,10.67,-0.1,0.08,2.93,1.01,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","ATGCAACTTTTGGACC",4,24.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I A89N G101Y N110W V115A Y121S P149L",7
"lib1","SARS-CoV-2","ATGCAAGCCCGCAAAA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44E T55G Y119L",3
"lib1","SARS-CoV-2","ATGCAAGCGGACAAAT",3,24.8,8.65,-2.12,0.32,1.5,1.13,0.04,">1 nonsynonymous","F8E D98G",2
"lib1","SARS-CoV-2","ATGCAAGCTTTCACCA",7,154.64,10.48,-0.29,0.04,2.88,1.02,0,">1 nonsynonymous","T46F L60R K198A",3
"lib1","SARS-CoV-2","ATGCAAGGGTTTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1T V11* N24K P54E L60G N92R N107S L183Y T201S",9
"lib1","SARS-CoV-2","ATGCAAGTGTGCATTA",1,49.73,10.66,-0.1,0.06,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCAAGTTAATGCGT",3,1.62,NA,NA,NA,NA,NA,NA,"stop","D98K I104* G146T",3
"lib1","SARS-CoV-2","ATGCAAGTTCCCAAAC",1,39.63,10.6,-0.16,0.05,2.97,1.02,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","ATGCAATAACAAATTT",2,0.42,NA,NA,NA,NA,NA,NA,"stop","A14S Y91G Q168* A192V",4
"lib1","SARS-CoV-2","ATGCAATAATAGTGCG",1,2.74,NA,NA,NA,NA,NA,NA,"stop","T100M S139I P149L T170I K199*",5
"lib1","SARS-CoV-2","ATGCAATAATCGCCGA",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L C61V K94S G152Q",4
"lib1","SARS-CoV-2","ATGCAATATAAGAAAG",3,19.97,6,-4.76,1.74,1.79,1.29,0.03,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","ATGCAATATATCTTTC",5,38.65,6.36,-4.41,0.92,1.5,1.21,0.07,">1 nonsynonymous","N64T W106R F167L",3
"lib1","SARS-CoV-2","ATGCAATCCCCAAATA",5,44.58,9.64,-1.13,0.08,2.91,1.08,0,"1 nonsynonymous","G117A",1
"lib1","SARS-CoV-2","ATGCAATGAGCAGATT",5,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","ATGCAATGGAGCAATT",3,15.51,6.28,-4.49,0.35,3,1.07,0.01,">1 nonsynonymous","A67N N107W G155N V173S",4
"lib1","SARS-CoV-2","ATGCAATGGTACACTA",3,30.15,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","F99Q T148M",2
"lib1","SARS-CoV-2","ATGCAATTCGAGAAAC",3,64.93,9.75,-1.02,0.07,2.74,1.05,0,">1 nonsynonymous","T85Y I138S G174K",3
"lib1","SARS-CoV-2","ATGCAATTCGGCGCTA",4,1.5,NA,NA,NA,NA,NA,NA,"stop","L60S P96N N118*",3
"lib1","SARS-CoV-2","ATGCAATTGATCATTT",2,12.91,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Y93M I138S V182R",3
"lib1","SARS-CoV-2","ATGCAATTGTATTCAA",2,6.28,11.06,0.29,0.29,2.29,1.16,0.02,"wildtype","",0
"lib1","SARS-CoV-2","ATGCAATTTAAAGAAT",9,140.16,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","V11C G86R S113M Y178A",4
"lib1","SARS-CoV-2","ATGCAATTTTTTAGAG",12,100.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6L D98N K132E C150Y S200D",5
"lib1","SARS-CoV-2","ATGCACAAATTCGCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L T15Y C49K E135D",4
"lib1","SARS-CoV-2","ATGCACAAGGGTCAAT",1,16.58,10.07,-0.69,0.11,2.21,1.04,0.01,">1 nonsynonymous","C61H I104G",2
"lib1","SARS-CoV-2","ATGCACACCAGGAATC",4,3.07,NA,NA,NA,NA,NA,NA,"stop","A22E S29* D90I D98T",4
"lib1","SARS-CoV-2","ATGCACACTTAAAGAT",4,55.22,10.65,-0.11,0.05,2.98,1.02,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","ATGCACAGTAAGTGAC",2,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R N58R G152M R179V",4
"lib1","SARS-CoV-2","ATGCACAGTTAGTAGG",13,217.52,9.18,-1.58,0.05,2.85,1.1,0,">1 nonsynonymous","T3S Y119D",2
"lib1","SARS-CoV-2","ATGCACCAGTCTAATA",2,20.19,10.57,-0.19,0.09,2.83,1.06,0,"1 nonsynonymous","P7A",1
"lib1","SARS-CoV-2","ATGCACCATGTCCGAT",1,37.42,7.73,-3.04,0.17,1.5,1.09,0.01,">1 nonsynonymous","F44L S113L",2
"lib1","SARS-CoV-2","ATGCACCCACCTATCC",1,5.6,10.04,-0.72,0.28,2.77,1,0.01,">1 nonsynonymous","Y119R F134A",2
"lib1","SARS-CoV-2","ATGCACCTATTAGTAG",3,96.63,10.78,0.02,0.08,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGCACCTTACAATAT",1,42.08,6.96,-3.8,0.4,1.56,1.03,0.03,">1 nonsynonymous","L38S Y91C D97F Y143Q T148I",5
"lib1","SARS-CoV-2","ATGCACGAAAAGTAGC",1,16.93,9.51,-1.25,0.12,2.29,1.03,0.01,">1 nonsynonymous","A105N V153S",2
"lib1","SARS-CoV-2","ATGCACGACAGGAATG",7,37.48,9.02,-1.74,0.19,1.8,1.2,0.01,">1 nonsynonymous","S43M K56L L162N",3
"lib1","SARS-CoV-2","ATGCACGATATGACGC",3,37.25,6,-4.76,0.97,3,1.17,0,">1 nonsynonymous","P54L N107S L125C N151I Y165R",5
"lib1","SARS-CoV-2","ATGCACGCACGCCTAC",7,72.22,9.82,-0.95,0.09,2.04,1.04,0,">1 nonsynonymous","I2C Y35C T46A T140K",4
"lib1","SARS-CoV-2","ATGCACGCATAATTCA",6,73.56,10.6,-0.17,0.06,2.92,1.05,0,">1 nonsynonymous","S41K L122M",2
"lib1","SARS-CoV-2","ATGCACGTATAAATCC",3,50.34,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61E F70H I142L Y175V S200N",5
"lib1","SARS-CoV-2","ATGCACGTCTCGCATC",8,36.67,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C102Q N171R",2
"lib1","SARS-CoV-2","ATGCACGTTGCTCGGA",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53M D90N L95C V103K",4
"lib1","SARS-CoV-2","ATGCACTACAATGGAC",9,62.23,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L57G G83V Y91R P96H F160N",5
"lib1","SARS-CoV-2","ATGCACTACATACTGA",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K Y123G",2
"lib1","SARS-CoV-2","ATGCACTAGCTAGACG",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V S200L",2
"lib1","SARS-CoV-2","ATGCACTATATTAGAA",3,18.36,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","G9K T55I V103Q",3
"lib1","SARS-CoV-2","ATGCACTCAACGTTAA",2,16.29,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y119R K128Y D137R",3
"lib1","SARS-CoV-2","ATGCACTGGCGTGCCT",11,1083.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D137G C150V Q176S",3
"lib1","SARS-CoV-2","ATGCACTGTAAAAAAA",7,130.55,9.14,-1.62,0.13,1.92,1.17,0.01,">1 nonsynonymous","L122I P161Q T201D",3
"lib1","SARS-CoV-2","ATGCACTTTCTGACAA",2,88.92,8.95,-1.81,0.1,2.15,1.1,0.01,">1 nonsynonymous","P54L D97Q Q176L",3
"lib1","SARS-CoV-2","ATGCAGAACAAGTGCA",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107R K132L",2
"lib1","SARS-CoV-2","ATGCAGAATGCACTAC",3,28.25,10.36,-0.41,0.04,2.98,1,0,"1 nonsynonymous","D59I",1
"lib1","SARS-CoV-2","ATGCAGACAAGGGAGA",2,9.75,6,-4.76,2,1.5,1.09,0.01,"1 nonsynonymous","Y93A",1
"lib1","SARS-CoV-2","ATGCAGACAGATCCTT",1,7.72,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F70W F134N",2
"lib1","SARS-CoV-2","ATGCAGAGCCCGAAGA",4,64.72,6.89,-3.87,0.49,1.5,1.2,0.03,">1 nonsynonymous","F99A S129R",2
"lib1","SARS-CoV-2","ATGCAGATTGAAGAAG",6,35.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F44S T100S Q144L",3
"lib1","SARS-CoV-2","ATGCAGCAAAAGTAAC",5,66.64,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I2V F17W P82A N120P",4
"lib1","SARS-CoV-2","ATGCAGCGAAATCCAA",6,27.64,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","V11G D90H C102V T170S",4
"lib1","SARS-CoV-2","ATGCAGCGTAATATGA",3,6.2,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","I72S D112V G146A",3
"lib1","SARS-CoV-2","ATGCAGGAATAGACAA",3,44.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","F12R S43R V77T D98P P169Q",5
"lib1","SARS-CoV-2","ATGCAGGAGCACTGAG",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K L95Q P149L",3
"lib1","SARS-CoV-2","ATGCAGGATCAGGGAG",1,18.27,10.57,-0.2,0.08,2.94,1.05,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","ATGCAGGCAAAGACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W Y91R W106S D112R P149Q F185R",6
"lib1","SARS-CoV-2","ATGCAGGCAACCTCCT",1,7.49,9.1,-1.67,0.35,1.5,1,0.05,">1 nonsynonymous","D34N D68M",2
"lib1","SARS-CoV-2","ATGCAGGCATATTCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K N118K S139L",3
"lib1","SARS-CoV-2","ATGCAGGCCACGTATA",1,16.69,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T3S L38R C61L G86W D98P N107S Y119G P161S",8
"lib1","SARS-CoV-2","ATGCAGGCGAGAGGTT",2,5.07,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10P F44K S69K",3
"lib1","SARS-CoV-2","ATGCAGGCTGAAAGTT",2,11.19,8.85,-1.91,0.15,2.58,1,0.01,">1 nonsynonymous","T15G Y119P",2
"lib1","SARS-CoV-2","ATGCAGTCACTGACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37N G117L F167*",3
"lib1","SARS-CoV-2","ATGCAGTCCTATGGAA",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83K V103R",2
"lib1","SARS-CoV-2","ATGCAGTGAGTACCCA",1,22.49,10.89,0.13,0.07,2.92,1.02,0,">1 nonsynonymous","K56L F134Y",2
"lib1","SARS-CoV-2","ATGCAGTTAAAAGATC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25K",1
"lib1","SARS-CoV-2","ATGCAGTTTAAAGCAG",2,9.69,9.73,-1.03,0.39,1.5,1,0.07,"1 nonsynonymous","K94P",1
"lib1","SARS-CoV-2","ATGCATAAAGGACGAA",8,42.3,6.04,-4.72,0.62,1.69,1.14,0.01,">1 nonsynonymous","L5T R27L N92V N120A",4
"lib1","SARS-CoV-2","ATGCATAAATCAAAAA",3,9.51,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A18W A105L Y119Q",3
"lib1","SARS-CoV-2","ATGCATACAACTACGA",6,19.48,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F17H Y35Q C61S Q168L",4
"lib1","SARS-CoV-2","ATGCATACAGACTAGT",6,85.97,9.91,-0.85,0.08,2.21,1.03,0,">1 nonsynonymous","L38I L162C",2
"lib1","SARS-CoV-2","ATGCATAGAATACGAT",1,10.81,10.76,0,0.12,2.98,1,0.01,">1 nonsynonymous","K56M S200R",2
"lib1","SARS-CoV-2","ATGCATAGAGTTCCAG",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D Y50R A105P T170P V182P",5
"lib1","SARS-CoV-2","ATGCATAGCATATTTT",7,75.95,10.52,-0.24,0.06,2.89,1.05,0,">1 nonsynonymous","L5P D90F N120K S129R",4
"lib1","SARS-CoV-2","ATGCATAGTTTACGTA",1,12.85,8.77,-2,0.15,1.76,1.07,0.01,">1 nonsynonymous","A67S Y91W V173R",3
"lib1","SARS-CoV-2","ATGCATATATTTAATC",10,168.1,9.94,-0.82,0.03,2.63,1.04,0,">1 nonsynonymous","I2S Y91Q",2
"lib1","SARS-CoV-2","ATGCATATCAATAAGG",7,18.13,6.11,-4.65,1.35,1.5,1.12,0.03,">1 nonsynonymous","K87F Y91A E135K",3
"lib1","SARS-CoV-2","ATGCATATCAGACCAA",7,81.39,10.57,-0.19,0.05,2.96,1,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","ATGCATATTAGAATGC",7,61.23,8.9,-1.86,0.1,2.5,1.11,0,">1 nonsynonymous","S43P C61D D112E",3
"lib1","SARS-CoV-2","ATGCATCAAATAAAAC",4,15.17,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","S19L V103N T170S",3
"lib1","SARS-CoV-2","ATGCATCACTAAAATT",7,205.26,10.42,-0.35,0.04,2.85,1.05,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","ATGCATCCGCTAATGT",1,107.28,10.81,0.05,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCATCTACTAAACG",2,101.25,10.68,-0.08,0.05,2.89,1.08,0,"1 nonsynonymous","V65L",1
"lib1","SARS-CoV-2","ATGCATCTCAGTAGTG",6,29.84,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A18S N107I Y121S E141S",4
"lib1","SARS-CoV-2","ATGCATCTTGCCCTTC",6,122.09,10.64,-0.13,0.04,2.96,1,0,">1 nonsynonymous","K114N A190V",2
"lib1","SARS-CoV-2","ATGCATGATAATCAAA",6,57.9,8.24,-2.52,0.15,1.83,1.11,0.01,">1 nonsynonymous","L60A Y91S Q168M",3
"lib1","SARS-CoV-2","ATGCATGCGGTGCGGA",2,3.04,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","ATGCATGCTTTTTGAG",2,24.46,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","C61A F70L G74V K87R N110F L125H",6
"lib1","SARS-CoV-2","ATGCATGTTACTATAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Y F99A V103Q E135G",4
"lib1","SARS-CoV-2","ATGCATTAAATATAAC",1,73.98,10.81,0.05,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCATTAATCCGGAT",2,41.28,10.28,-0.49,0.12,2.6,1,0.01,">1 nonsynonymous","V37A S45M S139R",3
"lib1","SARS-CoV-2","ATGCATTCAACCGGTG",4,98.61,10.45,-0.32,0.05,2.89,1.04,0,">1 nonsynonymous","L60S P149Q",2
"lib1","SARS-CoV-2","ATGCATTCACAATTAT",6,71.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V77S G83C N118V P149C",4
"lib1","SARS-CoV-2","ATGCATTCATAAAGAA",3,62.63,10.12,-0.64,0.06,2.62,1.04,0,">1 nonsynonymous","R27S F47T",2
"lib1","SARS-CoV-2","ATGCATTGTAAACAAC",2,2.04,NA,NA,NA,NA,NA,NA,"stop","F12G C61H T85E T201*",4
"lib1","SARS-CoV-2","ATGCATTGTAATAGCA",6,45.99,10.73,-0.03,0.05,2.89,1.04,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","ATGCATTTGTTAAACC",1,42.62,10.77,0.01,0.06,2.98,1,0,"1 nonsynonymous","S139Q",1
"lib1","SARS-CoV-2","ATGCCAAAAGAAAAAA",1,15.73,10.5,-0.27,0.12,2.73,1.06,0.01,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","ATGCCAAAAGCAAACA",2,55.35,8.48,-2.28,0.15,2.78,1.08,0.01,">1 nonsynonymous","L5Q Y175S",2
"lib1","SARS-CoV-2","ATGCCAAAATATGGCT",8,172.87,8.6,-2.16,0.08,2.47,1.08,0,">1 nonsynonymous","S45R Y119S S147F",3
"lib1","SARS-CoV-2","ATGCCAAACTATTAAG",1,5.45,10.9,0.13,0.26,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCCAAACTCCAATT",9,47.26,6,-4.76,0.86,3,1.08,0,">1 nonsynonymous","T15L Y119S Y121D S129Q",4
"lib1","SARS-CoV-2","ATGCCAAACTTTTTAA",3,19.13,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","C61G L131E",2
"lib1","SARS-CoV-2","ATGCCAAATGCAGCTT",3,73.03,6.76,-4.01,0.27,1.5,1.1,0.01,">1 nonsynonymous","G9W I104T N157R",3
"lib1","SARS-CoV-2","ATGCCAACCACGCTAC",1,18.32,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I28K D68H P149M",3
"lib1","SARS-CoV-2","ATGCCAACGCTCAAAA",4,47.42,9.87,-0.89,0.1,2.35,1.07,0,">1 nonsynonymous","S41M D75E T85S D90T",4
"lib1","SARS-CoV-2","ATGCCAACTGATCGAC",3,48.25,10.51,-0.25,0.06,2.92,1.03,0,">1 nonsynonymous","L5A K87A D97L",3
"lib1","SARS-CoV-2","ATGCCAACTTGCGGGT",1,13.29,9.04,-1.73,0.16,1.64,1.1,0.01,">1 nonsynonymous","K128W E135I F156H",3
"lib1","SARS-CoV-2","ATGCCAAGATAAGCGC",6,90.35,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G101I S113F P177S K199N",4
"lib1","SARS-CoV-2","ATGCCAATTAGTGTGC",4,39.29,10.61,-0.16,0.07,2.88,1.04,0,">1 nonsynonymous","A42P D98E N109K",3
"lib1","SARS-CoV-2","ATGCCAATTCTAAAAA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M D90R T170R V181Y",4
"lib1","SARS-CoV-2","ATGCCACAAAAATAGA",1,22.73,6.24,-4.52,0.79,1.5,1.22,0.05,">1 nonsynonymous","V37A W106P",2
"lib1","SARS-CoV-2","ATGCCACAGCTAAGCT",1,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V V71G V182P",3
"lib1","SARS-CoV-2","ATGCCACATGTTTTAA",4,55.37,10.26,-0.51,0.11,2.51,1,0.01,">1 nonsynonymous","G51V S164R",2
"lib1","SARS-CoV-2","ATGCCACCCGTGCTAT",5,72.96,8.38,-2.39,0.25,1.5,1.18,0.02,">1 nonsynonymous","C102L G155C",2
"lib1","SARS-CoV-2","ATGCCACCGATTCGGC",2,44.34,10.41,-0.36,0.15,2.61,1.31,0.01,"1 nonsynonymous","N171T",1
"lib1","SARS-CoV-2","ATGCCACGAATTCTTC",17,148.71,10.81,0.05,0.07,2.88,1.07,0,">1 nonsynonymous","N40R P197A",2
"lib1","SARS-CoV-2","ATGCCAGTACTTTGTA",1,8.56,9.81,-0.95,0.21,2.25,1.07,0.01,"1 nonsynonymous","I88C",1
"lib1","SARS-CoV-2","ATGCCAGTCTATAAAA",1,85.08,8.34,-2.42,0.14,2.27,1.09,0.01,">1 nonsynonymous","Y119C G152V",2
"lib1","SARS-CoV-2","ATGCCAGTGAGGGTTG",2,0.14,NA,NA,NA,NA,NA,NA,"stop","N4S R73* A105C N110L T170C V181L",6
"lib1","SARS-CoV-2","ATGCCATAATAGTGAG",6,52.53,9.73,-1.04,0.11,2.2,1.09,0,">1 nonsynonymous","R27F Y35N S43P F47C N151D",5
"lib1","SARS-CoV-2","ATGCCATACTATTTGC",2,8.27,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","G9K T46L N92T",3
"lib1","SARS-CoV-2","ATGCCATCTATACGGG",7,0.03,NA,NA,NA,NA,NA,NA,"stop","V11W V52I D97Y S108* S129R",5
"lib1","SARS-CoV-2","ATGCCATGATTCACTT",8,41.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14Y N64R A105H K128S V173A S200M",6
"lib1","SARS-CoV-2","ATGCCATTATCATTCG",1,10.81,6.94,-3.82,0.37,1.92,1.12,0.03,">1 nonsynonymous","L57M Y121K V181M",3
"lib1","SARS-CoV-2","ATGCCCAAAACGACGC",1,0.04,NA,NA,NA,NA,NA,NA,"stop","D75N P96H T201*",3
"lib1","SARS-CoV-2","ATGCCCAACTCATTCG",4,47.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","W23L T55V P96F N130A C150D",5
"lib1","SARS-CoV-2","ATGCCCACACTAATTA",10,66.63,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V77G W106Q F134A F167L",4
"lib1","SARS-CoV-2","ATGCCCACCGGGCGGA",2,11.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V L95N",2
"lib1","SARS-CoV-2","ATGCCCACGGGACCTG",6,126.49,6.64,-4.13,0.46,1.5,1.17,0.02,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","ATGCCCACTCGTACAG",3,124,10.41,-0.35,0.03,2.92,1,0,"1 nonsynonymous","F47C",1
"lib1","SARS-CoV-2","ATGCCCACTCGTTAAT",1,11.14,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I28M S53L Y93C S184Y K198N",5
"lib1","SARS-CoV-2","ATGCCCAGAAGTTAGC",4,72.04,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y21R K56V V77L T148P L162M",5
"lib1","SARS-CoV-2","ATGCCCATAGAGACCG",1,23.03,10.62,-0.15,0.02,2.96,1.02,0,">1 nonsynonymous","C61D T148K",2
"lib1","SARS-CoV-2","ATGCCCATGGCCCTTG",10,96.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C61H D112K",2
"lib1","SARS-CoV-2","ATGCCCCAAAAGAAGA",6,29.62,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","V182M",1
"lib1","SARS-CoV-2","ATGCCCCAGAGAATGG",2,11.81,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G117R R136T",2
"lib1","SARS-CoV-2","ATGCCCCGACTAGAGT",2,6.96,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","G9L N58C T100P K128R C150L",5
"lib1","SARS-CoV-2","ATGCCCCGCGATATTA",8,89.75,8.94,-1.82,0.11,2.07,1.15,0,">1 nonsynonymous","V52C K56W Q168M",3
"lib1","SARS-CoV-2","ATGCCCGAAGTCGAAC",5,12.39,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S41H P96H W106R",3
"lib1","SARS-CoV-2","ATGCCCGACCGACCTG",4,118.82,10.8,0.04,0.06,2.91,1.03,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","ATGCCCGGGTTACTGC",7,1.92,NA,NA,NA,NA,NA,NA,"stop","L5M K48* T170K",3
"lib1","SARS-CoV-2","ATGCCCTAGTTTTGCA",1,11.89,6,-4.76,2,1.5,1.04,0.02,">1 nonsynonymous","A14T Y50N D68K Y119S T201G",5
"lib1","SARS-CoV-2","ATGCCCTCCACACGTG",4,220.47,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P177L T201D",2
"lib1","SARS-CoV-2","ATGCCCTCGCCAAATC",3,23.6,7,-3.76,0.42,1.5,1.17,0.05,">1 nonsynonymous","F12R V37A I142N",3
"lib1","SARS-CoV-2","ATGCCCTCTATCGACA",5,45.79,9.63,-1.13,0.19,1.67,1.11,0.01,">1 nonsynonymous","G51I N58K V194L",3
"lib1","SARS-CoV-2","ATGCCCTGCAAAAAAA",1,31.95,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N24V K56S A81E K94N N107I",5
"lib1","SARS-CoV-2","ATGCCGACAAGATTGC",4,41.5,10.81,0.04,0.08,2.96,1.01,0,"1 nonsynonymous","T140E",1
"lib1","SARS-CoV-2","ATGCCGACATAAAGAG",5,92.34,10.28,-0.48,0.09,2.51,1,0,">1 nonsynonymous","Y91N G152R",2
"lib1","SARS-CoV-2","ATGCCGAGGACCTCAA",5,15.08,6,-4.76,1.81,1.79,1.08,0.01,">1 nonsynonymous","N1Q W106A R136S",3
"lib1","SARS-CoV-2","ATGCCGAGTACCAATA",10,111.27,9.38,-1.39,0.19,1.5,1.12,0.02,">1 nonsynonymous","F99I F126L",2
"lib1","SARS-CoV-2","ATGCCGATATGATTAC",10,82.84,6.08,-4.68,0.83,1.5,1.19,0.02,">1 nonsynonymous","S36M C49H T55K P82W T148L",5
"lib1","SARS-CoV-2","ATGCCGCAAGCGAGAG",4,100.93,9.82,-0.94,0.11,2.07,1.1,0,">1 nonsynonymous","D90S Y121N",2
"lib1","SARS-CoV-2","ATGCCGCAATAACGTA",5,243.27,10.43,-0.34,0.04,2.91,1.04,0,">1 nonsynonymous","Y39E A81G",2
"lib1","SARS-CoV-2","ATGCCGCCACCGGACA",3,21.06,9.92,-0.85,0.06,2.75,1,0,">1 nonsynonymous","K132P P149I",2
"lib1","SARS-CoV-2","ATGCCGCTTATAAGAC",17,307.42,10.69,-0.07,0.07,2.91,1.07,0,">1 nonsynonymous","C61H T140S",2
"lib1","SARS-CoV-2","ATGCCGGATATTACGT",3,88.62,10.78,0.02,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCCGGCCGTTCAGA",1,24.18,8.75,-2.02,0.2,1.68,1.21,0.02,"1 nonsynonymous","F17K",1
"lib1","SARS-CoV-2","ATGCCGGGACTATTTA",5,93.07,10.73,-0.03,0.04,2.97,1,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","ATGCCGTACCTTAAAT",12,162.45,10,-0.76,0.09,2.41,1.05,0,">1 nonsynonymous","K56W D90A T148S",3
"lib1","SARS-CoV-2","ATGCCGTATAATAAGA",4,47.29,10.78,0.02,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCCGTCTGTGTGAA",1,47.99,10.73,-0.04,0.04,2.98,1,0,">1 nonsynonymous","L5V T46W",2
"lib1","SARS-CoV-2","ATGCCGTGGAAGAACT",3,151.51,10.75,-0.01,0.06,2.89,1.06,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","ATGCCTAAATCTAAAG",4,17.34,9.89,-0.87,0.34,1.5,1.04,0.07,">1 nonsynonymous","T55H P149F P161T",3
"lib1","SARS-CoV-2","ATGCCTATCAACTAGA",7,79.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A18V Y165G",2
"lib1","SARS-CoV-2","ATGCCTATTAATAAAA",3,88.84,10.53,-0.24,0.04,2.88,1.07,0,">1 nonsynonymous","G9A F62N",2
"lib1","SARS-CoV-2","ATGCCTCCAGCGCATA",12,186.39,8.31,-2.45,0.15,2.22,1.13,0.01,">1 nonsynonymous","T100F G116R L125Q V181M",4
"lib1","SARS-CoV-2","ATGCCTCCATCGACCT",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101H Y119V",2
"lib1","SARS-CoV-2","ATGCCTCCGAGGCACC",7,1.4,NA,NA,NA,NA,NA,NA,"stop","I88* S113R",2
"lib1","SARS-CoV-2","ATGCCTGAGTAGCCGG",1,57.77,10.75,-0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCCTGCCACGGCTG",4,26.02,7.34,-3.43,0.42,1.5,1.19,0.05,"1 nonsynonymous","Y159D",1
"lib1","SARS-CoV-2","ATGCCTGTCCAGCCAC",8,90.19,10.19,-0.57,0.05,2.91,1.04,0,">1 nonsynonymous","I2S F47Y G116E",3
"lib1","SARS-CoV-2","ATGCCTGTGTACGATC",2,62.55,10.66,-0.1,0.03,2.9,1.04,0,">1 nonsynonymous","A18E D59T",2
"lib1","SARS-CoV-2","ATGCCTTAACGTCCAG",1,30.26,9.89,-0.87,0.2,2.18,1.06,0.02,">1 nonsynonymous","F8C S200Q",2
"lib1","SARS-CoV-2","ATGCCTTATTTGAATT",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Q P96Y",2
"lib1","SARS-CoV-2","ATGCCTTGTGCCCGCT",1,7.26,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F99T R124K F167C",3
"lib1","SARS-CoV-2","ATGCGAAAAATGCAAA",4,1.81,NA,NA,NA,NA,NA,NA,"stop","G86R A105C F134*",3
"lib1","SARS-CoV-2","ATGCGAAAGTCAATTG",3,75.59,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35Q D97H I142G N157S E186Y",5
"lib1","SARS-CoV-2","ATGCGAAAGTGACACA",4,38.27,10.2,-0.57,0.07,2.9,1.02,0,">1 nonsynonymous","G51S S139G",2
"lib1","SARS-CoV-2","ATGCGAAATAAGGTTT",10,2.23,NA,NA,NA,NA,NA,NA,"stop","K26* T55Y D90Y",3
"lib1","SARS-CoV-2","ATGCGAAATATACCAA",5,77.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35W Y91C N157P T201P",4
"lib1","SARS-CoV-2","ATGCGAACAGTCCGCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N Y35N G51F S147L G152K",5
"lib1","SARS-CoV-2","ATGCGAACTAGTTTAC",13,209.04,10.81,0.05,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGAATAGAAAACT",9,131.45,10.83,0.06,0.07,2.88,1.07,0,">1 nonsynonymous","D90E Y123F T148R",3
"lib1","SARS-CoV-2","ATGCGACAAGGTTTTT",5,9.35,6,-4.76,2,3,1.08,0,">1 nonsynonymous","W23M K56I C61L G152S",4
"lib1","SARS-CoV-2","ATGCGACACCTATTTA",3,27.04,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C61G C150Y G166E",3
"lib1","SARS-CoV-2","ATGCGACCTGTGCAAA",11,20.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95R Y165P",2
"lib1","SARS-CoV-2","ATGCGAGAACTTCAAC",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A T55L N151F",3
"lib1","SARS-CoV-2","ATGCGAGCACGCGCGT",1,31.06,10.85,0.09,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGAGCTAAGCATT",7,101.65,10.33,-0.44,0.07,2.88,1,0,">1 nonsynonymous","S53Y F134L",2
"lib1","SARS-CoV-2","ATGCGAGTAACGAGAA",2,13.81,9.03,-1.74,0.26,2.33,1.08,0.03,">1 nonsynonymous","D34F K128V T170Q",3
"lib1","SARS-CoV-2","ATGCGAGTAACTTGAT",10,84.64,10.19,-0.57,0.06,2.85,1.01,0,">1 nonsynonymous","V52I K132E S139D P149H",4
"lib1","SARS-CoV-2","ATGCGAGTTCCCATAA",1,8.76,10.18,-0.58,0.08,2.8,1,0,">1 nonsynonymous","E10D F44C",2
"lib1","SARS-CoV-2","ATGCGATAATAGTTAA",4,62.62,8.68,-2.08,0.18,1.5,1.1,0.01,">1 nonsynonymous","A14I S108Y Y175W",3
"lib1","SARS-CoV-2","ATGCGATAGGTCCGGT",12,136.21,6,-4.76,1.56,1.5,1.24,0.02,">1 nonsynonymous","I88R L131N",2
"lib1","SARS-CoV-2","ATGCGATCCACACCCA",2,63.46,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F70S S147Q",2
"lib1","SARS-CoV-2","ATGCGATCGTTGCCCG",2,24.57,8.56,-2.2,0.14,2.41,1.06,0.01,">1 nonsynonymous","D34I N171L",2
"lib1","SARS-CoV-2","ATGCGATTGCAATACA",6,149.94,10.34,-0.43,0.02,2.93,1.01,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","ATGCGCAAACAACTAA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A18T S108G E141* T201W",4
"lib1","SARS-CoV-2","ATGCGCACAAACTAGT",3,17.08,9.73,-1.04,0.12,2.27,1.05,0.01,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","ATGCGCACATCGACTG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R S147P K198R",3
"lib1","SARS-CoV-2","ATGCGCATACAGGAAT",5,53.45,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","T3L G83D Y93I Y121W",4
"lib1","SARS-CoV-2","ATGCGCATACGCTAGT",3,53.16,6.21,-4.56,0.55,1.5,1.21,0.01,">1 nonsynonymous","S43Y C61M F99L P161L",4
"lib1","SARS-CoV-2","ATGCGCCAAATAAAAG",5,71.29,10.82,0.05,0.05,2.94,1.03,0,"1 nonsynonymous","N40Q",1
"lib1","SARS-CoV-2","ATGCGCCCCATGCAGC",2,6.66,10.83,0.07,0.11,2.93,1,0,"1 nonsynonymous","G83R",1
"lib1","SARS-CoV-2","ATGCGCCGCCACCTCC",2,13.38,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","N64S F99C",2
"lib1","SARS-CoV-2","ATGCGCGACGATCATA",2,38.38,10.69,-0.07,0.07,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGCGATATCCAAC",4,14.77,10.71,-0.06,0.06,2.96,1,0,">1 nonsynonymous","S36D S139A V173N",3
"lib1","SARS-CoV-2","ATGCGCTCAACAGCAC",1,20.21,6.8,-3.96,0.32,1.5,1.14,0.03,">1 nonsynonymous","C6W P54V D90H T148L N171Q",5
"lib1","SARS-CoV-2","ATGCGCTCGGGTTCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N V20E V103D N130S T148I",5
"lib1","SARS-CoV-2","ATGCGCTTGGAAACGC",1,7.6,10.39,-0.38,0.24,2.7,1.26,0.02,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","ATGCGGAAACCAGCAT",7,26.06,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D34G C49R V71G G172T",4
"lib1","SARS-CoV-2","ATGCGGACAACCCGTG",4,104.91,7.87,-2.9,0.11,2.17,1.16,0,">1 nonsynonymous","Y119S N157Q",2
"lib1","SARS-CoV-2","ATGCGGACAAGTAAAA",4,93.68,10.59,-0.17,0.07,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGGACGGAGAATT",3,0.49,NA,NA,NA,NA,NA,NA,"stop","K48S Y119V Y175*",3
"lib1","SARS-CoV-2","ATGCGGATTGTATGAC",4,75.17,8.36,-2.41,0.17,1.5,1.16,0.01,">1 nonsynonymous","S29H T55W R78G L162W",4
"lib1","SARS-CoV-2","ATGCGGCATAAGAATG",4,61.87,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","Y91T A145D",2
"lib1","SARS-CoV-2","ATGCGGCGTAATGCAA",2,43.86,8.88,-1.88,0.19,2.04,1.18,0.01,">1 nonsynonymous","N4R G9M F44Y L122G I142N",5
"lib1","SARS-CoV-2","ATGCGGGAAGGGCTGT",11,83.01,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","F44L T55S Q84E A105L G146K K199S",6
"lib1","SARS-CoV-2","ATGCGGGCACTAGGTT",1,32.27,9.65,-1.12,0.06,1.98,1.06,0,">1 nonsynonymous","C31Q A67I K128Y",3
"lib1","SARS-CoV-2","ATGCGGTAGTTACGAC",3,82.98,9.7,-1.06,0.03,2.86,1.04,0,"1 nonsynonymous","T170N",1
"lib1","SARS-CoV-2","ATGCGTAAGTGAAGCC",3,16.05,7.29,-3.48,0.33,1.5,1.22,0.04,">1 nonsynonymous","F8K A14R Q144T",3
"lib1","SARS-CoV-2","ATGCGTAATCTATACA",1,39.24,10.53,-0.24,0.06,2.92,1.04,0,"1 nonsynonymous","F44H",1
"lib1","SARS-CoV-2","ATGCGTACCATGGCAG",3,26.34,10.83,0.07,0.07,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGTATAAACATAT",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54K D98Y V103S F160S",4
"lib1","SARS-CoV-2","ATGCGTATAAGATATA",2,69.08,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","R25A G86S D98H L125F S139W Y175S",6
"lib1","SARS-CoV-2","ATGCGTATTTTTTTTA",6,60.06,10.87,0.11,0.08,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGCGTCAATACCATC",7,137.54,9.84,-0.92,0.09,2.25,1.03,0,"1 nonsynonymous","V11H",1
"lib1","SARS-CoV-2","ATGCGTCACGAGTAAA",6,75.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N92E L122Q L188D",3
"lib1","SARS-CoV-2","ATGCGTCTGCCACTAT",3,64.83,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","K56P A67T W106L N120D",4
"lib1","SARS-CoV-2","ATGCGTGAAATTGCAA",2,785.98,10.74,-0.02,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCGTGATAAAAGTA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F G116V Q168Y S184G",4
"lib1","SARS-CoV-2","ATGCGTGGCCATTAAT",2,164.66,9.98,-0.79,0.08,2.28,1.04,0,">1 nonsynonymous","Y39H L57S T140M",3
"lib1","SARS-CoV-2","ATGCGTGGGCCCATAA",1,6.11,11.2,0.43,0.15,2.87,1.09,0,">1 nonsynonymous","N1T S139G",2
"lib1","SARS-CoV-2","ATGCGTTAATATCTAA",3,9.84,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C49A F99V D112L",3
"lib1","SARS-CoV-2","ATGCGTTCTGAGCAAA",6,59.28,10.19,-0.58,0.08,2.83,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","ATGCGTTTCCATCAAA",3,34.57,8.24,-2.53,0.38,1.5,1.08,0.05,">1 nonsynonymous","V37P Y50L T170S",3
"lib1","SARS-CoV-2","ATGCTAAAAGGAATCA",2,34.76,10.3,-0.47,0.05,2.86,1,0,">1 nonsynonymous","T3Y Q84H",2
"lib1","SARS-CoV-2","ATGCTAAAGTATTACT",5,22.96,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","S69R V103W K132N G146Q",4
"lib1","SARS-CoV-2","ATGCTAACACAACCTC",7,2.55,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","ATGCTAACCGCCCTAA",6,72.42,10.64,-0.12,0.04,2.96,1.01,0,">1 nonsynonymous","A67V A192Y",2
"lib1","SARS-CoV-2","ATGCTAACGAAGCAAA",10,103.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V20E R179K",2
"lib1","SARS-CoV-2","ATGCTAACTATAGCTT",14,144.14,6,-4.76,0.99,1.5,1.2,0.01,">1 nonsynonymous","F12L N30G A105L",3
"lib1","SARS-CoV-2","ATGCTAAGAAAAGGTC",2,7.87,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","V20G D90P D98N F167L",4
"lib1","SARS-CoV-2","ATGCTAAGCACAAGAG",4,11.77,9.14,-1.62,0.26,1.5,1.03,0.04,">1 nonsynonymous","V32C P82T F160S",3
"lib1","SARS-CoV-2","ATGCTAATAATCAAAC",5,9.13,7.91,-2.86,0.42,1.5,1,0.04,">1 nonsynonymous","S41T Y91I V181M",3
"lib1","SARS-CoV-2","ATGCTAATGAAATGCA",1,9.55,9.94,-0.83,0.24,1.87,1.01,0.06,">1 nonsynonymous","V11E S200G",2
"lib1","SARS-CoV-2","ATGCTACAAAAGACGA",2,21.81,9.91,-0.85,0.1,2.75,1.07,0.01,">1 nonsynonymous","L5Y G83R T100H G116H T140K",5
"lib1","SARS-CoV-2","ATGCTACAACTCTCGA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","F134Q E141*",2
"lib1","SARS-CoV-2","ATGCTACACCACCTGT",2,5.73,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","F12Y C61I K94Y",3
"lib1","SARS-CoV-2","ATGCTACATGACTGCC",1,20.03,8.45,-2.31,0.18,2.58,1.02,0.01,">1 nonsynonymous","S36E N58Y Y119S L125F",4
"lib1","SARS-CoV-2","ATGCTACCAAGGTTAA",2,19.3,9.63,-1.13,0.09,2.74,1.09,0,"1 nonsynonymous","G146F",1
"lib1","SARS-CoV-2","ATGCTACGATAGGAGA",9,1.51,NA,NA,NA,NA,NA,NA,"stop","T15* A22T S53C L60V N107T E154G",6
"lib1","SARS-CoV-2","ATGCTAGAAGAGTTCC",3,117.44,10.52,-0.24,0.05,2.88,1.04,0,">1 nonsynonymous","D90T K198L",2
"lib1","SARS-CoV-2","ATGCTAGAATCCCGCG",8,153.75,10.78,0.02,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTAGAATCGATAG",9,161.34,10.65,-0.12,0.04,2.92,1.02,0,">1 nonsynonymous","D98T K128A P149E",3
"lib1","SARS-CoV-2","ATGCTAGCGTGCCCTC",2,0,NA,NA,NA,NA,NA,NA,"stop","T46L N171*",2
"lib1","SARS-CoV-2","ATGCTAGGATGATGTT",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V A81V",2
"lib1","SARS-CoV-2","ATGCTAGTGGACTCGG",3,48.49,10.45,-0.32,0.11,2.69,1.23,0,">1 nonsynonymous","T63I S139G",2
"lib1","SARS-CoV-2","ATGCTATAACGGCGCG",3,42.99,6.98,-3.78,0.14,2.47,1.13,0,">1 nonsynonymous","S129V Y143Q Q168T",3
"lib1","SARS-CoV-2","ATGCTATACACGTAGT",3,19.46,7.2,-3.57,0.32,1.5,1,0.04,">1 nonsynonymous","A22R C61M A89W",3
"lib1","SARS-CoV-2","ATGCTATCACTCCCAT",1,50.54,8.79,-1.97,0.08,2.07,1.09,0,">1 nonsynonymous","E10D A14N N107D",3
"lib1","SARS-CoV-2","ATGCTATCCGACGTTT",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K C49T C61S K94Y F99R N107T",6
"lib1","SARS-CoV-2","ATGCTATGCTAAACCC",1,25.84,7.48,-3.29,0.31,1.56,1.13,0.02,"1 nonsynonymous","C158H",1
"lib1","SARS-CoV-2","ATGCTATTAATTTACG",5,0.19,NA,NA,NA,NA,NA,NA,"stop","F8E A22* R73Q N107P",4
"lib1","SARS-CoV-2","ATGCTATTCCTAACAA",2,0.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","ATGCTATTGGCTTAAT",2,55.8,10.54,-0.22,0.05,2.91,1.02,0,"1 nonsynonymous","V182I",1
"lib1","SARS-CoV-2","ATGCTATTGTCAGACC",6,19.99,6.7,-4.07,0.47,1.63,1.06,0.03,">1 nonsynonymous","S19R D90H N151T F167R",4
"lib1","SARS-CoV-2","ATGCTCAAAAAAGAAA",1,13.2,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C31T K128V G146W G174R",4
"lib1","SARS-CoV-2","ATGCTCAAAGTGAAAA",3,96.31,7.18,-3.58,0.2,1.96,1.17,0.01,">1 nonsynonymous","C158H S200A",2
"lib1","SARS-CoV-2","ATGCTCAAATGTAATG",5,102.3,10.82,0.06,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTCAATAACAAAC",5,59.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y K128P",2
"lib1","SARS-CoV-2","ATGCTCAATGTCCCCA",5,3856.83,10.77,0,0.05,2.93,1.03,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","ATGCTCAGACTGAATA",4,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q K87M D98T R127S",4
"lib1","SARS-CoV-2","ATGCTCAGCCTTAGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","L57R I88*",2
"lib1","SARS-CoV-2","ATGCTCAGGAGTACGT",3,42.7,10.79,0.02,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTCAGGCAAATAC",2,31.86,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","V37W K56P A89N L95N G146Q F167V",6
"lib1","SARS-CoV-2","ATGCTCCACGGGGTAC",2,17.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V71G G101F N120K F167N V182F",5
"lib1","SARS-CoV-2","ATGCTCCAGATCCAAT",7,46.4,9.39,-1.37,0.25,1.5,1.07,0.02,">1 nonsynonymous","G9W Y91N I104T T148V",4
"lib1","SARS-CoV-2","ATGCTCCCCACGATGA",1,6.52,6,-4.76,2,1.5,1.08,0.04,">1 nonsynonymous","G101P N157F",2
"lib1","SARS-CoV-2","ATGCTCCCCCCCTATA",1,12.7,6.88,-3.88,0.42,3,1.02,0.03,">1 nonsynonymous","V65N Y93I",2
"lib1","SARS-CoV-2","ATGCTCCTTAATCCCC",2,125.12,9.99,-0.77,0.1,2.08,1.03,0,"1 nonsynonymous","F70Y",1
"lib1","SARS-CoV-2","ATGCTCGTTTGCACCT",1,6.39,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12M D68R A145V G174I",4
"lib1","SARS-CoV-2","ATGCTCTACAGAAATA",2,11.84,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","F17K Y66A D90Y I142Q",4
"lib1","SARS-CoV-2","ATGCTCTTAAAAAGGT",7,65.46,10.74,-0.02,0.09,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTCTTTCGCCCAG",5,87.15,6.1,-4.66,0.94,1.5,1.2,0.02,">1 nonsynonymous","V11I R16H V103M E141W",4
"lib1","SARS-CoV-2","ATGCTCTTTGCATTAG",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y R136K",2
"lib1","SARS-CoV-2","ATGCTGAACAAAAAAA",1,43.5,8.06,-2.71,0.19,2.21,1.11,0.01,">1 nonsynonymous","C61G I142Q A145T E186P",4
"lib1","SARS-CoV-2","ATGCTGAATATAAAAA",3,1.27,NA,NA,NA,NA,NA,NA,"stop","N92M Y119L E154*",3
"lib1","SARS-CoV-2","ATGCTGAATTATACAG",4,80.51,10.26,-0.51,0.04,2.87,1.06,0,">1 nonsynonymous","Y35C K56S",2
"lib1","SARS-CoV-2","ATGCTGACTAGTAGAC",1,60.13,10.69,-0.07,0.07,3,1,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","ATGCTGACTGCTGCAC",2,30.43,10.33,-0.43,0.06,2.76,1.11,0,">1 nonsynonymous","N1S F134D",2
"lib1","SARS-CoV-2","ATGCTGAGCAAAACCA",1,22.48,9.97,-0.8,0.12,2.66,1.05,0.01,">1 nonsynonymous","I28A A33T",2
"lib1","SARS-CoV-2","ATGCTGAGTGATCAGA",8,116.88,10.77,0.01,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTGATCCTCGAGT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","S45N P82S L95S K199*",4
"lib1","SARS-CoV-2","ATGCTGATTACCTGAT",5,75.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37Y R73S D97N V103M R179W",5
"lib1","SARS-CoV-2","ATGCTGATTGAAGAAT",2,26.55,10.73,-0.04,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTGCACGTATGAG",2,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K Y35K R78T F99A K128W L183S",6
"lib1","SARS-CoV-2","ATGCTGCATATCTACA",3,35.05,10.73,-0.04,0.06,2.94,1.06,0,">1 nonsynonymous","I28L N64A I138D",3
"lib1","SARS-CoV-2","ATGCTGCGCTACCTTA",1,10.13,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","ATGCTGCTATTATGTA",8,3,NA,NA,NA,NA,NA,NA,"stop","D34I T85* V103D F126P",4
"lib1","SARS-CoV-2","ATGCTGGCACTAGTGC",1,36.8,10.13,-0.63,0.12,2.54,1.05,0.01,">1 nonsynonymous","P96T K132E T201P",3
"lib1","SARS-CoV-2","ATGCTGGCACTTAATT",2,13.83,10.49,-0.27,0.11,2.87,1,0,">1 nonsynonymous","L125M R136W",2
"lib1","SARS-CoV-2","ATGCTGGTACGCTCTT",5,127.77,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12H F62C A89Y N110T Y178N",5
"lib1","SARS-CoV-2","ATGCTGTAGCGTGTAT",10,53.58,9.85,-0.92,0.06,2.13,1.07,0,">1 nonsynonymous","F17Y D34C",2
"lib1","SARS-CoV-2","ATGCTGTATAACTCCG",3,28.24,10.74,-0.02,0.11,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGCTGTATCAAAAAA",13,84.81,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","Y93N R179L",2
"lib1","SARS-CoV-2","ATGCTGTATCCTTGAT",7,0.8,NA,NA,NA,NA,NA,NA,"stop","S19M Y165*",2
"lib1","SARS-CoV-2","ATGCTGTCTCGTGACA",7,173.97,9.9,-0.86,0.09,2.37,1.06,0,">1 nonsynonymous","F8C V37S",2
"lib1","SARS-CoV-2","ATGCTGTGACAATTAT",9,35.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53C Y91P G101R R124T",4
"lib1","SARS-CoV-2","ATGCTGTTCCCATCAT",6,57.52,9.51,-1.25,0.11,2.53,1.1,0.01,">1 nonsynonymous","V11T P169N",2
"lib1","SARS-CoV-2","ATGCTTAATGACGAGA",8,105.73,10.77,0.01,0.04,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGCTTATATGTAAAC",2,32.9,9.3,-1.47,0.16,1.68,1.16,0.01,">1 nonsynonymous","N4T P133L",2
"lib1","SARS-CoV-2","ATGCTTCAGAATCCAG",4,41.07,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R25S A89D A145V F160Q V173G Q176W",6
"lib1","SARS-CoV-2","ATGCTTCGACCCGGAG",4,46.69,9.74,-1.03,0.1,2.05,1.08,0,">1 nonsynonymous","I2W V11S",2
"lib1","SARS-CoV-2","ATGCTTCGCACGCTAT",2,20.75,10.5,-0.26,0.07,2.92,1,0,">1 nonsynonymous","G9C I138A Q163M",3
"lib1","SARS-CoV-2","ATGCTTGACAATGTAG",5,165.1,6,-4.76,1.33,1.5,1.14,0.01,">1 nonsynonymous","W23K V37F N64L G116R R127I",5
"lib1","SARS-CoV-2","ATGCTTGAGTGTACCG",1,38.53,10.63,-0.13,0.07,2.97,1,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","ATGCTTGCACTAAACA",1,52.24,6.16,-4.6,0.49,1.5,1.11,0.01,">1 nonsynonymous","I80P Y119V K128V I138L F160L",5
"lib1","SARS-CoV-2","ATGCTTGGTACGAGCC",12,70.19,6,-4.76,1.08,1.5,1.21,0.02,">1 nonsynonymous","G51T I88T Y121S",3
"lib1","SARS-CoV-2","ATGCTTGTACCACGAG",1,6.66,8.47,-2.3,0.34,1.5,1.08,0.01,">1 nonsynonymous","V37A P82R G152S",3
"lib1","SARS-CoV-2","ATGCTTTAAAAAGAAA",3,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S T85E G117L",3
"lib1","SARS-CoV-2","ATGCTTTACCTGATAC",1,20.75,9.94,-0.82,0.09,2.48,1.08,0,">1 nonsynonymous","A33T C61G I104Y",3
"lib1","SARS-CoV-2","ATGCTTTCAAATCGCA",22,279.51,10.78,0.01,0.08,2.88,1.08,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","ATGGAAAAACAAAGTT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","I2R V52S W106* D137C E154V G166N",6
"lib1","SARS-CoV-2","ATGGAAAAACATAGAA",4,35.15,9.13,-1.63,0.24,1.81,1.11,0.02,">1 nonsynonymous","N64R A89M",2
"lib1","SARS-CoV-2","ATGGAAAAATACTTTT",1,41.31,10.69,-0.07,0.03,2.92,1.06,0,"1 nonsynonymous","K114E",1
"lib1","SARS-CoV-2","ATGGAAAACCTAAATA",3,40.9,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C61V I88N E135L V153I",4
"lib1","SARS-CoV-2","ATGGAAAAGAATAAAA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* D90*",2
"lib1","SARS-CoV-2","ATGGAAAATGAAAATT",1,0.7,NA,NA,NA,NA,NA,NA,"stop","I28* K48S",2
"lib1","SARS-CoV-2","ATGGAAAATGGCTCAC",1,114.22,10.68,-0.09,0.03,2.91,1.03,0,">1 nonsynonymous","T3L T63S",2
"lib1","SARS-CoV-2","ATGGAAACAAGAGATG",4,25.93,8.52,-2.25,0.16,1.81,1.1,0.02,">1 nonsynonymous","T15L Q176L",2
"lib1","SARS-CoV-2","ATGGAAAGAAAAAAGG",3,8.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5M Y93S G101E R136F F160W",5
"lib1","SARS-CoV-2","ATGGAAAGGTCTTTGA",1,29.81,6,-4.76,1.71,1.5,1.26,0.01,">1 nonsynonymous","A81K R136G F156I",3
"lib1","SARS-CoV-2","ATGGAAATATAGTAAT",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V N64D V103W",3
"lib1","SARS-CoV-2","ATGGAAATGCCTGAGT",6,42.2,6,-4.76,2,3,1.22,0,">1 nonsynonymous","A67R S113V N120L",3
"lib1","SARS-CoV-2","ATGGAACAACAACCGG",4,44.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D68N N157A",2
"lib1","SARS-CoV-2","ATGGAACAATATAAAT",1,26.44,10.21,-0.56,0.12,2.53,1.07,0.01,"1 nonsynonymous","K94S",1
"lib1","SARS-CoV-2","ATGGAACCTGCAAAAC",8,78.09,10.22,-0.55,0.04,2.81,1.07,0,">1 nonsynonymous","V37S Q79H",2
"lib1","SARS-CoV-2","ATGGAACTCAAAAGTC",5,138.8,10.19,-0.58,0.04,2.92,1.01,0,">1 nonsynonymous","V11Y S200W",2
"lib1","SARS-CoV-2","ATGGAACTCCTTTCTC",6,71.28,10.62,-0.14,0.05,2.91,1.04,0,">1 nonsynonymous","N1P N64K F160S",3
"lib1","SARS-CoV-2","ATGGAAGAAAAGCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V20W E186V K198*",3
"lib1","SARS-CoV-2","ATGGAAGAAAGCATAG",7,102.35,10.73,-0.04,0.07,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGAAGACAGAGCCA",8,3.06,NA,NA,NA,NA,NA,NA,"stop","L131Q G152*",2
"lib1","SARS-CoV-2","ATGGAAGAGAATATGC",7,28.32,6,-4.76,0.6,3,1.1,0,">1 nonsynonymous","Y21K V77P G174R",3
"lib1","SARS-CoV-2","ATGGAAGCGAATTTAC",6,20.18,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","P82M C158R",2
"lib1","SARS-CoV-2","ATGGAAGGTGACCAAT",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I Y178D",2
"lib1","SARS-CoV-2","ATGGAAGTAACCATGG",1,9.44,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19F S36V Y66S",3
"lib1","SARS-CoV-2","ATGGAAGTACAGGAAT",2,14.07,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2D F17A Y93S K128Y",4
"lib1","SARS-CoV-2","ATGGAAGTGAACCACT",4,14.51,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S36E K48S G155Y V180K",4
"lib1","SARS-CoV-2","ATGGAAGTTCCTTGAA",2,6.66,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","D98L D137A Y175F",3
"lib1","SARS-CoV-2","ATGGAATAAAAGACAT",2,8.13,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19Q V103M N107T V181K T201R",5
"lib1","SARS-CoV-2","ATGGAATAAACCCCAT",4,1.56,NA,NA,NA,NA,NA,NA,"stop","T55D N64I S69* V115I Y121T C150G",6
"lib1","SARS-CoV-2","ATGGAATACAAACCAC",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I P82C F126T",3
"lib1","SARS-CoV-2","ATGGAATACCCTATCG",3,62.97,10.61,-0.15,0.1,2.76,1.07,0,">1 nonsynonymous","S129T T148Y",2
"lib1","SARS-CoV-2","ATGGAATCTAAAGAGG",7,52.13,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","N58M Y66V A89K N110E Y121M",5
"lib1","SARS-CoV-2","ATGGAATCTGAAGAGT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","D59Y N107V N171* P177K",4
"lib1","SARS-CoV-2","ATGGAATTAAAAGCCC",12,138.6,10.72,-0.04,0.04,2.95,1.01,0,"1 nonsynonymous","D98H",1
"lib1","SARS-CoV-2","ATGGAATTAAGCTCAC",2,120.95,10.79,0.03,0.06,2.92,1.01,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","ATGGAATTAGTTTAAT",2,59.81,9.86,-0.9,0.14,2.11,1.06,0.01,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","ATGGAATTTAGGCATA",9,110.16,10.78,0.01,0.07,2.87,1.07,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","ATGGAATTTATACACT",1,17.48,6,-4.76,0.78,1.5,1.07,0.01,">1 nonsynonymous","W106L Y121Q R136S G166L S200L",5
"lib1","SARS-CoV-2","ATGGACAACTAATCAA",4,18.17,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C61M K114P N120I E135V L183A",5
"lib1","SARS-CoV-2","ATGGACAATACGTCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61S N107*",2
"lib1","SARS-CoV-2","ATGGACAATGAAGAAA",5,92.78,7.1,-3.67,0.19,1.5,1.11,0.01,">1 nonsynonymous","N107M G117N",2
"lib1","SARS-CoV-2","ATGGACAATTAATCGC",3,67.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y66T S147Y Y165P",3
"lib1","SARS-CoV-2","ATGGACAATTCTCTAA",4,0.85,NA,NA,NA,NA,NA,NA,"stop","S36* T55F Y91D G152R R179Y",5
"lib1","SARS-CoV-2","ATGGACACAAATAGGA",1,16.34,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","A42S T85R Y93N",3
"lib1","SARS-CoV-2","ATGGACACACGTATAA",3,61.13,10.4,-0.36,0.04,2.93,1,0,"1 nonsynonymous","R16P",1
"lib1","SARS-CoV-2","ATGGACAGACAATAGA",1,23.94,10.69,-0.08,0.09,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGACAGCTAACTGG",2,1.26,NA,NA,NA,NA,NA,NA,"stop","A42* W106M",2
"lib1","SARS-CoV-2","ATGGACAGTCTATGAG",4,38.83,6,-4.76,2,3,1.2,0,">1 nonsynonymous","S29D N64R L95Q",3
"lib1","SARS-CoV-2","ATGGACATTCAGAAAC",11,86.04,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2R L5P I72P Q176L",4
"lib1","SARS-CoV-2","ATGGACATTCGCAATA",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W I104Y K132R",3
"lib1","SARS-CoV-2","ATGGACCAAACTGCTG",4,45.18,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9E S41H P161L",3
"lib1","SARS-CoV-2","ATGGACCACCCTGAAA",3,25.66,10.74,-0.03,0.1,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGACCACGGCGAAA",2,17.29,7.1,-3.67,0.72,1.5,1.15,0.07,">1 nonsynonymous","Y39M Y50C A89I",3
"lib1","SARS-CoV-2","ATGGACCCTGCAAATA",5,38.69,8.62,-2.14,0.08,2.73,1.09,0,">1 nonsynonymous","A81S G166D",2
"lib1","SARS-CoV-2","ATGGACCGGAGGCAAT",4,28.55,8.98,-1.79,0.08,2.86,1.07,0,">1 nonsynonymous","S41R Y119I",2
"lib1","SARS-CoV-2","ATGGACCTCCCCAAGT",1,11.24,10.97,0.21,0.12,2.91,1,0.01,"1 nonsynonymous","N110H",1
"lib1","SARS-CoV-2","ATGGACCTCGTTAGCT",2,6.63,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44V P96A R136W F156S P177L",5
"lib1","SARS-CoV-2","ATGGACCTCTATCCCA",4,3.14,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","ATGGACGACCCATCAA",11,54.79,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1Y F8L D34Q G51S G86N I138W",6
"lib1","SARS-CoV-2","ATGGACGAGATCCCAT",7,124.25,10.31,-0.46,0.05,2.93,1.01,0,">1 nonsynonymous","A18G G174R",2
"lib1","SARS-CoV-2","ATGGACGATTGCAAAA",2,3.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","ATGGACGCATCAGTGT",3,4.38,NA,NA,NA,NA,NA,NA,"stop","N4* P82V D90W Y143M C150M P197T",6
"lib1","SARS-CoV-2","ATGGACGCGCTAATAC",1,18.47,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","E10S V77P D90G K132H",4
"lib1","SARS-CoV-2","ATGGACGGCGCTAACA",2,22.59,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","T3H Y50T I72V A81E C150F",5
"lib1","SARS-CoV-2","ATGGACGGGCCAATAC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","K94D Y119F R179*",3
"lib1","SARS-CoV-2","ATGGACGGGTAAGAAT",4,5.51,NA,NA,NA,NA,NA,NA,"stop","S41I V77* K87R F99C N107A E141L",6
"lib1","SARS-CoV-2","ATGGACGTAATATGTA",5,45.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A33E S41F Y50T",3
"lib1","SARS-CoV-2","ATGGACGTCTATAAAA",8,0.69,NA,NA,NA,NA,NA,NA,"stop","V52I T63Y I80G L122S Y165K T201*",6
"lib1","SARS-CoV-2","ATGGACGTGCGTGGAG",6,292.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41T D68R Y91V N107L T140A",5
"lib1","SARS-CoV-2","ATGGACTACCAACCAG",5,126.66,10.54,-0.23,0.04,2.93,1.02,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","ATGGAGAAACGCGAAG",4,40.44,10.73,-0.03,0.06,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGAGAAGAGGGGAA",6,80.81,10.67,-0.1,0.03,2.95,1.03,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","ATGGAGACGGGGTTCT",2,53.48,10.67,-0.09,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGAGAGGGTGGGTT",4,8.31,6.86,-3.9,0.4,2.45,1.07,0.04,">1 nonsynonymous","Y50M D98L N109L D112E",4
"lib1","SARS-CoV-2","ATGGAGATAGCAAACT",15,5.21,NA,NA,NA,NA,NA,NA,"stop","G9Y I28V S36G A81E C195*",5
"lib1","SARS-CoV-2","ATGGAGATCTAATTTT",2,26.06,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G9S K48P I72S D97I",4
"lib1","SARS-CoV-2","ATGGAGATGATCTATG",3,22.6,10.32,-0.44,0.11,2.7,1.01,0.01,">1 nonsynonymous","L5F N30Y T55L N64W K199F",5
"lib1","SARS-CoV-2","ATGGAGCAAGCCGATT",8,149.36,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y39L K56R C61R A105E Q163W",5
"lib1","SARS-CoV-2","ATGGAGCAAGGTCAAT",5,202.98,10.54,-0.22,0.04,2.91,1.02,0,">1 nonsynonymous","S41A C61Y",2
"lib1","SARS-CoV-2","ATGGAGCAATGGCCTA",3,38.98,9.82,-0.95,0.12,1.96,1.03,0.01,">1 nonsynonymous","F12S Y35V",2
"lib1","SARS-CoV-2","ATGGAGCCCATGATGT",2,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30V N92A F134Q",3
"lib1","SARS-CoV-2","ATGGAGGATTAAACAA",1,26.84,10.71,-0.05,0.07,2.91,1.01,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","ATGGAGGGAGAATTAG",2,28.38,9.87,-0.89,0.15,2.4,1.06,0.01,">1 nonsynonymous","N58I S129F F160D",3
"lib1","SARS-CoV-2","ATGGAGGTCCTATCCC",6,86.66,10.63,-0.13,0.03,2.95,1.04,0,">1 nonsynonymous","S41R D59Q",2
"lib1","SARS-CoV-2","ATGGAGTAATCCCAAA",8,36.37,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D34P K48H D90L I104L P177C",5
"lib1","SARS-CoV-2","ATGGAGTAGATGCACG",19,244.21,10.74,-0.02,0.07,2.89,1.07,0,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","ATGGAGTATGGCCAAA",3,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y V173P",2
"lib1","SARS-CoV-2","ATGGAGTCATCCATTA",5,127.41,10.1,-0.66,0.05,2.89,1.04,0,">1 nonsynonymous","G9N G174E",2
"lib1","SARS-CoV-2","ATGGAGTCGCAACGAA",3,20.57,10.5,-0.26,0.06,2.99,1.02,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","ATGGAGTTTCTATACG",1,6.03,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATGGATAAAAAATATA",2,23.47,10.23,-0.53,0.08,2.79,1,0,">1 nonsynonymous","L60K E135M",2
"lib1","SARS-CoV-2","ATGGATAACCAGTCAT",6,148.48,8.69,-2.08,0.14,1.75,1.13,0.01,">1 nonsynonymous","L5I R73L E135G",3
"lib1","SARS-CoV-2","ATGGATAACCATCGCC",3,2.41,NA,NA,NA,NA,NA,NA,"stop","K26* L60* E76* P149*",4
"lib1","SARS-CoV-2","ATGGATAAGACACTAA",6,111.36,8.58,-2.19,0.11,2.5,1.06,0.01,">1 nonsynonymous","A14R Y39R D59K G146E",4
"lib1","SARS-CoV-2","ATGGATAATTAGCATA",9,76.6,6,-4.76,1.88,1.5,1.2,0.02,">1 nonsynonymous","R73T N157L",2
"lib1","SARS-CoV-2","ATGGATACATTTCAAG",4,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H G51D G86S Y121H",4
"lib1","SARS-CoV-2","ATGGATACTCCTAGCT",3,54.28,10.18,-0.58,0.07,2.77,1,0,">1 nonsynonymous","T3A L57D",2
"lib1","SARS-CoV-2","ATGGATAGCTAATCAA",4,13.39,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","A33D R127M V173F",3
"lib1","SARS-CoV-2","ATGGATATGGATAAGA",8,47.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N1F R25F F44L V52D",4
"lib1","SARS-CoV-2","ATGGATATGTAAGTAC",2,1.08,NA,NA,NA,NA,NA,NA,"stop","N1M A18M G86Y F126T Y165* R179K",6
"lib1","SARS-CoV-2","ATGGATATTTTTTTAG",3,8.37,10.62,-0.14,0.18,2.76,1.16,0.01,"1 nonsynonymous","A33M",1
"lib1","SARS-CoV-2","ATGGATCAAATTAACT",4,29.77,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N64S N92T N107V F185H",4
"lib1","SARS-CoV-2","ATGGATCAACCTCGAC",1,5.99,10.73,-0.03,0.09,3,1.02,0,">1 nonsynonymous","G83F S129T E141L",3
"lib1","SARS-CoV-2","ATGGATCACCTGGAAA",2,7.2,6.18,-4.59,1.09,3,1.06,0,">1 nonsynonymous","I80G A105F V182S G196L",4
"lib1","SARS-CoV-2","ATGGATCCCTCGCCTG",9,114.74,10.77,0.01,0.07,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGATCCTAGGATAG",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L A33Y C102S G152E Q176P",5
"lib1","SARS-CoV-2","ATGGATCGTTGGTCAA",1,20.14,6.32,-4.45,0.33,1.5,1.06,0.01,">1 nonsynonymous","C6L R179V",2
"lib1","SARS-CoV-2","ATGGATGCAAATATTG",3,14.11,9.84,-0.92,0.14,2.65,1.02,0.01,">1 nonsynonymous","E10F D90N",2
"lib1","SARS-CoV-2","ATGGATGCAAGCTACG",3,57.58,7.11,-3.65,0.14,1.63,1.08,0,">1 nonsynonymous","A67L K87R S113E P149N",4
"lib1","SARS-CoV-2","ATGGATGCGATCGTGA",11,49.42,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F44K D97L C102S",3
"lib1","SARS-CoV-2","ATGGATTAAAAGCAAA",2,17.31,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","A33L K48G Y119P Q144Y",4
"lib1","SARS-CoV-2","ATGGATTACACAATAA",2,51.78,10.2,-0.56,0.06,2.94,1,0,">1 nonsynonymous","C6T K87V",2
"lib1","SARS-CoV-2","ATGGATTTAAACTAAT",5,121.75,10.15,-0.61,0.05,2.95,1,0,">1 nonsynonymous","Y143L S200N",2
"lib1","SARS-CoV-2","ATGGATTTGGTCCCAG",1,21.64,10.51,-0.25,0.07,2.89,1.11,0,">1 nonsynonymous","D98Y I104F K199S",3
"lib1","SARS-CoV-2","ATGGCAAAAGAAATGG",3,7.39,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","S45F P54L D75W N107E K114Q",5
"lib1","SARS-CoV-2","ATGGCAAAATCTAGTC",6,88.15,10.81,0.04,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGCAAACCAATGCA",7,25.67,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","P96F D97N P149N",3
"lib1","SARS-CoV-2","ATGGCAAATAAACCAG",2,36.6,8.83,-1.94,0.4,1.5,1,0.07,">1 nonsynonymous","S69G G83S",2
"lib1","SARS-CoV-2","ATGGCAACCTCCGGTG",1,6.6,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","T46K V65R F99S W106S N118L L131R V153M P169C Q176S L183F",10
"lib1","SARS-CoV-2","ATGGCAACTGTCAGGC",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K Y121M",2
"lib1","SARS-CoV-2","ATGGCAAGAAAACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","P82* F99Q A145H",3
"lib1","SARS-CoV-2","ATGGCAAGACAAGTCT",7,67.98,8.92,-1.84,0.17,1.5,1.02,0.01,">1 nonsynonymous","Y50C E141A",2
"lib1","SARS-CoV-2","ATGGCAAGGACCAATA",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A18Q K48R W106L",4
"lib1","SARS-CoV-2","ATGGCAATAAACCCCT",9,68.77,8.17,-2.59,0.27,1.55,1.18,0.02,">1 nonsynonymous","F8L K87N D98E I104T G155M",5
"lib1","SARS-CoV-2","ATGGCAATAAATACGA",1,37.3,7.93,-2.83,0.35,1.5,1,0.04,">1 nonsynonymous","F12P V37W Q84S A145K",4
"lib1","SARS-CoV-2","ATGGCAATAAGAAACA",4,5.91,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3C G74S A89I",3
"lib1","SARS-CoV-2","ATGGCAATGTGCAACT",3,42.5,10.46,-0.31,0.04,2.94,1.03,0,">1 nonsynonymous","N130K F156R",2
"lib1","SARS-CoV-2","ATGGCAATTAGCAGAT",10,57.74,9.87,-0.9,0.06,2.58,1.07,0,">1 nonsynonymous","Y35A S139T S184F",3
"lib1","SARS-CoV-2","ATGGCACAACTAATTA",2,30.58,10.27,-0.49,0.11,2.5,1.06,0,">1 nonsynonymous","D98F E186T",2
"lib1","SARS-CoV-2","ATGGCACACAATTGCC",3,0.19,NA,NA,NA,NA,NA,NA,"stop","A67D S108D L187*",3
"lib1","SARS-CoV-2","ATGGCACACGATCAAG",5,22.2,6,-4.76,2,1.5,1.25,0.04,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","ATGGCACAGCAGCATT",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S108K D137A C195F",4
"lib1","SARS-CoV-2","ATGGCACAGCATACTT",7,489.28,9.11,-1.66,0.23,1.5,1,0.02,">1 nonsynonymous","A22P W23L Y35C I88L G196R",5
"lib1","SARS-CoV-2","ATGGCACATGCCATAC",2,1.05,NA,NA,NA,NA,NA,NA,"stop","N4L D34H T100D Q176*",4
"lib1","SARS-CoV-2","ATGGCACCTGAAGATT",3,31.29,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F17Y D90F V173T",3
"lib1","SARS-CoV-2","ATGGCACGAAGATTCA",6,79.81,6.39,-4.38,0.69,1.5,1.31,0.03,">1 nonsynonymous","V11A L131N T201E",3
"lib1","SARS-CoV-2","ATGGCACTTAGGGACC",3,81.9,10.04,-0.73,0.08,2.51,1.04,0,">1 nonsynonymous","N13T E141R",2
"lib1","SARS-CoV-2","ATGGCAGATGAAATAT",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R D90R F99V A105P C150L",5
"lib1","SARS-CoV-2","ATGGCAGTCATAACTT",7,124.49,8.69,-2.08,0.1,2.69,1.06,0,">1 nonsynonymous","G83L N120L Q168L",3
"lib1","SARS-CoV-2","ATGGCATAAAACCACT",2,20.8,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35C F47L A89C D97Y V115T",5
"lib1","SARS-CoV-2","ATGGCATAACGAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R73M F99* S139L P169A S200W",5
"lib1","SARS-CoV-2","ATGGCATATAAGCTGA",6,52.43,6.03,-4.74,1.31,1.5,1.17,0.02,">1 nonsynonymous","F12M R78L N107P G174H V180A S200C",6
"lib1","SARS-CoV-2","ATGGCATGATTTTTTG",5,71.57,9.71,-1.05,0.09,1.99,1.08,0,">1 nonsynonymous","E10Y F62C E141F",3
"lib1","SARS-CoV-2","ATGGCATGTTGGCACT",12,142.09,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68E A81D N118V",3
"lib1","SARS-CoV-2","ATGGCATTTAACCTAT",4,99.2,9.36,-1.41,0.05,2.83,1.13,0,">1 nonsynonymous","N58H Y119H",2
"lib1","SARS-CoV-2","ATGGCCAATGATATGA",2,41.92,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F12E K26Q F44P G86K T100Y Y178A",6
"lib1","SARS-CoV-2","ATGGCCAGCGATTGAT",9,72.78,10.59,-0.17,0.04,2.92,1.04,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","ATGGCCCAGGCGACTT",1,40.51,10.79,0.03,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGCCCATGATAATA",5,94.7,10.74,-0.02,0.05,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGCCCCATGTTGTA",4,73.86,8.3,-2.46,0.18,2.57,1.2,0.01,">1 nonsynonymous","C61V Y159M P169S",3
"lib1","SARS-CoV-2","ATGGCCCTAGTATCTA",3,12.7,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I88D Y93I V115S",3
"lib1","SARS-CoV-2","ATGGCCGACTCAAACC",8,164.59,10.77,0.01,0.06,2.91,1.03,0,">1 nonsynonymous","F8L V153L",2
"lib1","SARS-CoV-2","ATGGCCGATTTTATCT",3,51.4,9.34,-1.43,0.14,1.82,1.08,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","ATGGCCGGATACCAAA",2,14.23,8.95,-1.81,0.27,1.63,1.29,0.04,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","ATGGCCGGTCTGTCAG",4,77.39,10.53,-0.24,0.07,2.83,1.04,0,">1 nonsynonymous","C61R S139G V173F",3
"lib1","SARS-CoV-2","ATGGCCTAACTAATAT",2,23.41,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","T100P G155F P161Y",3
"lib1","SARS-CoV-2","ATGGCCTAAGAGTCTA",1,58.79,10.67,-0.1,0.07,2.91,1.06,0,">1 nonsynonymous","S36L T55K",2
"lib1","SARS-CoV-2","ATGGCCTAAGGACAAA",8,99.44,10.88,0.11,0.09,2.85,1.07,0,">1 nonsynonymous","K114R L122A",2
"lib1","SARS-CoV-2","ATGGCCTTACCGTCGC",6,98.08,9.78,-0.99,0.09,2.28,1.06,0,">1 nonsynonymous","V32L Y91V",2
"lib1","SARS-CoV-2","ATGGCCTTCATTGTGA",4,3.54,NA,NA,NA,NA,NA,NA,"stop","V20S K48H N157* Q176F",4
"lib1","SARS-CoV-2","ATGGCGACATAAACTT",1,51.91,10.28,-0.48,0.07,2.76,1.03,0,"1 nonsynonymous","P7I",1
"lib1","SARS-CoV-2","ATGGCGACGTCTAACG",2,0,NA,NA,NA,NA,NA,NA,"stop","F12G L111E Y119* G146S",4
"lib1","SARS-CoV-2","ATGGCGAGTTTCATGA",8,64.33,8.41,-2.36,0.12,2.85,1.07,0.01,">1 nonsynonymous","Y159A V173L",2
"lib1","SARS-CoV-2","ATGGCGCAACACCGCA",7,56.23,8.24,-2.52,0.26,1.5,1.04,0.03,">1 nonsynonymous","L57T D90R N107P",3
"lib1","SARS-CoV-2","ATGGCGCAATCAACCT",9,140.14,9.25,-1.52,0.05,2.83,1.08,0,">1 nonsynonymous","Y119T G152S Q163S",3
"lib1","SARS-CoV-2","ATGGCGCAGACTAACG",2,44.84,10.88,0.12,0.06,2.93,1.03,0,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","ATGGCGCAGTGACATG",9,10.84,NA,NA,NA,NA,NA,NA,"stop","K56V Y119* T140R",3
"lib1","SARS-CoV-2","ATGGCGCTAACCAGTA",2,52.26,10.82,0.06,0.1,2.9,1.04,0,">1 nonsynonymous","N64S G196W",2
"lib1","SARS-CoV-2","ATGGCGCTAATACCAC",1,9.58,6,-4.76,0.95,3,1.06,0,">1 nonsynonymous","N13E G86D Y119K L131G D137T F156V G166A",7
"lib1","SARS-CoV-2","ATGGCGCTTTTGCCCG",1,24.75,10.52,-0.24,0.06,2.85,1.03,0,"1 nonsynonymous","N13E",1
"lib1","SARS-CoV-2","ATGGCGTATAAAAAAC",4,12.85,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","A14M V37C S45A P82L Y143I",5
"lib1","SARS-CoV-2","ATGGCGTTATCCACCT",2,71.09,10.22,-0.54,0.06,2.95,1.02,0,">1 nonsynonymous","L5N K87N T148V",3
"lib1","SARS-CoV-2","ATGGCGTTGACTAAGT",2,63.5,8.98,-1.78,0.11,2.65,1.13,0.01,">1 nonsynonymous","Y165S P197L",2
"lib1","SARS-CoV-2","ATGGCTAATACTAAAT",11,128.06,9.53,-1.23,0.11,1.82,1.12,0,">1 nonsynonymous","R127M K199M",2
"lib1","SARS-CoV-2","ATGGCTAGCGGAGAAT",2,46.33,6,-4.76,1.49,1.5,1.11,0.01,">1 nonsynonymous","V37P A67S D98C L131K Y175K",5
"lib1","SARS-CoV-2","ATGGCTATAGTTTTCG",2,6.53,6,-4.76,2,3,1,0,">1 nonsynonymous","A33L L57A G117Y P133Y",4
"lib1","SARS-CoV-2","ATGGCTCAACTTGAGA",2,40.57,8.51,-2.26,0.39,1.5,1,0.07,">1 nonsynonymous","C61P V103Y Y119S P149S N157S P197C",6
"lib1","SARS-CoV-2","ATGGCTGAAAAACTGA",7,72.19,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y119R Y159R",2
"lib1","SARS-CoV-2","ATGGCTGAACACCTAA",2,32.36,6,-4.76,0.62,3,1.1,0,">1 nonsynonymous","N4Y C102W S139V T148I",4
"lib1","SARS-CoV-2","ATGGCTGAATTAAACA",4,173.47,8.32,-2.44,0.08,2.27,1.11,0,">1 nonsynonymous","S36L D90N T100K L125K A145V",5
"lib1","SARS-CoV-2","ATGGCTGATGGCGAGA",2,74.76,10.19,-0.58,0.04,2.85,1.02,0,">1 nonsynonymous","N64P Y123A",2
"lib1","SARS-CoV-2","ATGGCTTACCTGTACA",4,31.39,6,-4.76,2,1.5,1.27,0.01,">1 nonsynonymous","F12H C61S F99N",3
"lib1","SARS-CoV-2","ATGGCTTCACAAATAT",8,210.42,10.7,-0.06,0.04,2.91,1.05,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","ATGGCTTGTAACCCGT",3,0.4,NA,NA,NA,NA,NA,NA,"stop","R27T S41I T55S A105Y P149*",5
"lib1","SARS-CoV-2","ATGGCTTTCATTTACG",2,12.18,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","V52P Y93I N107S",3
"lib1","SARS-CoV-2","ATGGGAAATCTATACT",7,1017.62,8.26,-2.51,0.14,1.82,1.09,0.01,">1 nonsynonymous","R78V Y121G",2
"lib1","SARS-CoV-2","ATGGGAACAGTTTCGC",4,23.96,9.4,-1.36,0.08,2.84,1.08,0,">1 nonsynonymous","I2R Y119S Q168M K198L",4
"lib1","SARS-CoV-2","ATGGGAACTTCGATGT",1,19.64,9.54,-1.23,0.09,2.78,1.03,0.01,">1 nonsynonymous","A14R N118G",2
"lib1","SARS-CoV-2","ATGGGAAGATCTAAAT",4,158.24,9.42,-1.35,0.1,2.12,1.11,0,">1 nonsynonymous","C6S F62V F134R",3
"lib1","SARS-CoV-2","ATGGGAAGTAGAATTA",5,52.83,10.49,-0.27,0.06,2.89,1.09,0,"1 nonsynonymous","N13H",1
"lib1","SARS-CoV-2","ATGGGACATGTCATAA",1,1.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","ATGGGACCCAAAGAAA",1,87.88,9.49,-1.27,0.15,2.13,1.12,0.01,">1 nonsynonymous","K48C K87V T100D",3
"lib1","SARS-CoV-2","ATGGGACGAACAGTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7D P149T",2
"lib1","SARS-CoV-2","ATGGGACTAGATAAGC",2,63.8,10.4,-0.36,0.06,2.84,1.05,0,">1 nonsynonymous","L60N G116Q",2
"lib1","SARS-CoV-2","ATGGGACTATACAAAT",1,48.93,10.22,-0.54,0.06,2.86,1.08,0,">1 nonsynonymous","K48V C61H Y123S",3
"lib1","SARS-CoV-2","ATGGGACTGATCACTA",7,128.49,10.5,-0.27,0.04,2.91,1.05,0,"1 nonsynonymous","T15V",1
"lib1","SARS-CoV-2","ATGGGAGAGGACATTC",2,38.48,10.83,0.07,0.08,2.86,1.08,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","ATGGGAGAGTAAGTCG",5,40.84,6,-4.76,2,3,1.19,0,">1 nonsynonymous","N4K F44P G74T T201S",4
"lib1","SARS-CoV-2","ATGGGAGATTAAACCG",2,42.85,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y50F F99D",2
"lib1","SARS-CoV-2","ATGGGAGCTAAATCCG",6,1.6,NA,NA,NA,NA,NA,NA,"stop","F62* V77A T148E",3
"lib1","SARS-CoV-2","ATGGGAGGTCAAATAG",4,100.24,10,-0.76,0.06,2.84,1.04,0,">1 nonsynonymous","I104M G152V",2
"lib1","SARS-CoV-2","ATGGGAGTTTAACCTG",1,71.22,9.96,-0.81,0.04,2.79,1.09,0,"1 nonsynonymous","C31G",1
"lib1","SARS-CoV-2","ATGGGATGAAGACTTT",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y V103R",2
"lib1","SARS-CoV-2","ATGGGATGAATGACAT",12,54.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1L L95Y I142V",3
"lib1","SARS-CoV-2","ATGGGCAAAAAAAACG",2,2.54,NA,NA,NA,NA,NA,NA,"stop","P82* L95S I138S G174L",4
"lib1","SARS-CoV-2","ATGGGCAAAATAGAAA",3,16.51,9.78,-0.98,0.12,2.33,1,0.01,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","ATGGGCAAACCATTAT",3,8.25,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","G9T L131N Y175R",3
"lib1","SARS-CoV-2","ATGGGCAGTATCATTG",2,59.71,10.57,-0.19,0.04,2.92,1.03,0,">1 nonsynonymous","A42G C61L",2
"lib1","SARS-CoV-2","ATGGGCCAACTTGTCT",5,59.75,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","C6A S129L G146M F156S G166S",5
"lib1","SARS-CoV-2","ATGGGCCATCGCACTT",1,16.83,9.07,-1.69,0.47,1.5,1,0.06,">1 nonsynonymous","G9W T85S P96Y",3
"lib1","SARS-CoV-2","ATGGGCGAACAAAATA",1,5.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E D34V K48T C49R",4
"lib1","SARS-CoV-2","ATGGGCGTAATAACTT",2,43.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6G G86A P133F Q144D",4
"lib1","SARS-CoV-2","ATGGGCTAGATAGGCC",4,72.55,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V71Q W106V F126L",3
"lib1","SARS-CoV-2","ATGGGCTGCGAGAGGG",2,73.46,10,-0.76,0.06,2.94,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","ATGGGGAAGCATAACT",6,3.73,NA,NA,NA,NA,NA,NA,"stop","D68* S129R G174S",3
"lib1","SARS-CoV-2","ATGGGGAAGGTAATTA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51L V115G D137V S164K",4
"lib1","SARS-CoV-2","ATGGGGAATAATTAAT",2,51,9.14,-1.62,0.24,1.62,1.1,0.02,">1 nonsynonymous","W23E E141S Q168H",3
"lib1","SARS-CoV-2","ATGGGGACACAACAGG",1,19.7,10.85,0.08,0.17,2.76,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATGGGGAGGTAATTAA",7,70.41,10.8,0.04,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGGGCAAGTTAGCC",14,216.96,10.4,-0.36,0.04,2.89,1.04,0,">1 nonsynonymous","E10G R16H K26E",3
"lib1","SARS-CoV-2","ATGGGGCGCAACCTAT",2,32.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51F A81T F160L",3
"lib1","SARS-CoV-2","ATGGGGCTACTGGACC",3,1.05,NA,NA,NA,NA,NA,NA,"stop","S108* K128W F156T A190L",4
"lib1","SARS-CoV-2","ATGGGGCTCAACGATT",2,8.7,10.07,-0.69,0.15,2.65,1,0,">1 nonsynonymous","N13C A18P V37E Y91L",4
"lib1","SARS-CoV-2","ATGGGGGACTAAAGTT",4,49.6,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63Y K94M K128I P161S",4
"lib1","SARS-CoV-2","ATGGGGGTTACTCGAC",7,151.54,8.49,-2.28,0.14,2.06,1.1,0.01,"1 nonsynonymous","N157V",1
"lib1","SARS-CoV-2","ATGGGGGTTCACCTAA",4,46.89,9.65,-1.12,0.13,1.96,1.05,0.01,">1 nonsynonymous","P7Q A105N K132E",3
"lib1","SARS-CoV-2","ATGGGGTAAAAGCAAC",6,107.82,10.81,0.05,0.07,2.92,1.06,0,">1 nonsynonymous","Y39V V173A",2
"lib1","SARS-CoV-2","ATGGGGTTGCTATTTG",1,12.79,6,-4.76,2,3,1.15,0.02,">1 nonsynonymous","F8W F99V Q168I K198Y",4
"lib1","SARS-CoV-2","ATGGGTAATGACGATA",4,1.39,NA,NA,NA,NA,NA,NA,"stop","D137K Y175L S200*",3
"lib1","SARS-CoV-2","ATGGGTAGAGCCGTAC",6,52.31,10.79,0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGGTATCTGAGCCT",2,13.72,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F12W L38S Y66W A105P T140S",5
"lib1","SARS-CoV-2","ATGGGTATTATGTACC",1,1.01,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","ATGGGTCCAACCCTCT",2,11.06,9.52,-1.24,0.18,1.9,1.09,0.01,">1 nonsynonymous","A18S V37W S53P V71C G152K",5
"lib1","SARS-CoV-2","ATGGGTCGTACCGGCG",3,59.55,9.64,-1.12,0.11,1.78,1.09,0,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","ATGGGTCTGACTCAAA",5,72.04,10.71,-0.06,0.09,2.86,1.04,0,"1 nonsynonymous","T3F",1
"lib1","SARS-CoV-2","ATGGGTCTTTGTATAT",4,15.19,6.66,-4.11,0.53,1.75,1.14,0.06,">1 nonsynonymous","C102R F156N G174P K199T",4
"lib1","SARS-CoV-2","ATGGGTGGATCTAATT",1,11.4,10.28,-0.49,0.1,2.94,1,0,">1 nonsynonymous","S129F S139R",2
"lib1","SARS-CoV-2","ATGGGTTAAAAACGAA",1,16.95,10.44,-0.33,0.13,2.92,1.04,0.01,">1 nonsynonymous","D59S K87Y N151V",3
"lib1","SARS-CoV-2","ATGGGTTAAACCCAAA",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F Y21M A33I N58S F167R",5
"lib1","SARS-CoV-2","ATGGGTTATTTTTTGG",12,28.74,9.18,-1.59,0.16,2.22,1.14,0.01,">1 nonsynonymous","T100Y N118T Y178N",3
"lib1","SARS-CoV-2","ATGGGTTCACATGAGA",2,12.86,10.41,-0.36,0.08,2.97,1,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","ATGGGTTTCGAATTCC",1,27.62,10.68,-0.09,0.08,2.93,1.04,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","ATGGTAAAATCTGGCC",1,16.4,8.26,-2.51,0.18,2.68,1.06,0.01,">1 nonsynonymous","N118Y T170L",2
"lib1","SARS-CoV-2","ATGGTAAATTTATAAC",5,83.98,10.74,-0.02,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGTAAGACAAAACT",1,52.93,9.5,-1.26,0.11,1.8,1.08,0.01,">1 nonsynonymous","L5Y W106C S113A",3
"lib1","SARS-CoV-2","ATGGTAAGTACGAATT",9,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H D90E F126N C150I Y165H",5
"lib1","SARS-CoV-2","ATGGTAAGTATTAAGT",16,182.62,9.15,-1.61,0.1,2.14,1.14,0,">1 nonsynonymous","C61R N107T",2
"lib1","SARS-CoV-2","ATGGTAATAACTCCTT",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S53V K198G",3
"lib1","SARS-CoV-2","ATGGTAATATGACGAG",2,15.35,9.64,-1.12,0.18,1.69,1.26,0.01,">1 nonsynonymous","S53L E141L E186I",3
"lib1","SARS-CoV-2","ATGGTAATGACAACCT",1,23.84,9.59,-1.17,0.13,2.01,1.09,0.01,">1 nonsynonymous","C6S V37R A81R",3
"lib1","SARS-CoV-2","ATGGTAATGCCGAGCC",19,8.42,NA,NA,NA,NA,NA,NA,"stop","S41* K132Y K198G",3
"lib1","SARS-CoV-2","ATGGTAATGGTATAAG",2,55.87,8.56,-2.21,0.13,2.68,1.07,0.01,">1 nonsynonymous","G9L L125C G166S",3
"lib1","SARS-CoV-2","ATGGTAATGTTGATCC",3,7.71,6.04,-4.72,0.67,1.88,1.09,0.01,">1 nonsynonymous","L5F G86M D97C N120V",4
"lib1","SARS-CoV-2","ATGGTAATTTAGATGT",5,54.25,10.75,-0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGTACAAGCTTAAT",2,25.12,9.98,-0.78,0.15,2.5,1.05,0.01,">1 nonsynonymous","T15W P54A",2
"lib1","SARS-CoV-2","ATGGTACACACAAATG",1,14.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4L C49I G86C",3
"lib1","SARS-CoV-2","ATGGTACACTTGTACA",3,64.69,8.64,-2.12,0.22,1.5,1.1,0.02,">1 nonsynonymous","T55H G86K",2
"lib1","SARS-CoV-2","ATGGTACAGAATTGTG",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E C61S G86F A190T",4
"lib1","SARS-CoV-2","ATGGTACAGTCGTGGA",4,59.41,10.31,-0.45,0.06,2.92,1,0,">1 nonsynonymous","I28V L60R",2
"lib1","SARS-CoV-2","ATGGTACCCCTTTTTA",4,7.87,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N4P T55L D97L C102S L125A T148E",6
"lib1","SARS-CoV-2","ATGGTACCCTCTAGCG",7,26.55,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5E K87R P96E E135I T170H S200C",6
"lib1","SARS-CoV-2","ATGGTACCGCGATAAA",7,62.89,10.74,-0.03,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGTACCGTTTCCGT",4,0.03,NA,NA,NA,NA,NA,NA,"stop","T63* K87F",2
"lib1","SARS-CoV-2","ATGGTAGAGTGAGAGG",2,34.09,10.78,0.01,0.08,2.98,1,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","ATGGTAGCAAGATGCA",4,52.3,10.12,-0.64,0.09,2.51,1.03,0.01,">1 nonsynonymous","D34V E154S",2
"lib1","SARS-CoV-2","ATGGTAGGTAGCGGTG",9,89.51,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86I E135L",2
"lib1","SARS-CoV-2","ATGGTAGTAATCCGGA",3,35.15,10.35,-0.41,0.08,2.82,1.08,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","ATGGTAGTAATTAACA",1,9.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V52Y V65S R73I P96M P161Y",5
"lib1","SARS-CoV-2","ATGGTAGTATATGCTT",7,64.86,6,-4.76,2,1.51,1.14,0.01,">1 nonsynonymous","G9E Y21I S29W S43I V181S",5
"lib1","SARS-CoV-2","ATGGTAGTGTTGTTGC",3,77.66,9.22,-1.54,0.09,2.76,1.13,0,">1 nonsynonymous","G9S Y143L G152E",3
"lib1","SARS-CoV-2","ATGGTATAAAACATTG",5,2.59,NA,NA,NA,NA,NA,NA,"stop","I2L P7* Y50C V103Y N110S G117F",6
"lib1","SARS-CoV-2","ATGGTATAAATAACTA",3,1.03,NA,NA,NA,NA,NA,NA,"stop","F44S Y50T Q84R D137* Y178V",5
"lib1","SARS-CoV-2","ATGGTATAGGTCAATT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","C6E F167* Y178I",3
"lib1","SARS-CoV-2","ATGGTATAGTATAAAT",6,82.72,10.27,-0.49,0.04,2.95,1,0,">1 nonsynonymous","K87G L187Q",2
"lib1","SARS-CoV-2","ATGGTATCCGGATAAT",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I I88S",2
"lib1","SARS-CoV-2","ATGGTATCGCAGGATA",9,80.53,9.68,-1.08,0.11,2.03,1.06,0,">1 nonsynonymous","C49V Q163G",2
"lib1","SARS-CoV-2","ATGGTATGTGCCCAAT",2,20.23,10.5,-0.27,0.08,2.86,1.07,0,">1 nonsynonymous","S184L T201P",2
"lib1","SARS-CoV-2","ATGGTATTGACAAAAG",15,225.24,10.11,-0.66,0.05,2.58,1.05,0,">1 nonsynonymous","I104H P197G",2
"lib1","SARS-CoV-2","ATGGTATTGACATTTC",4,73.74,6,-4.76,1.53,1.5,1.16,0.02,">1 nonsynonymous","G9E R16V F70N S129M",4
"lib1","SARS-CoV-2","ATGGTCACCAATACAG",4,43.24,8.89,-1.88,0.24,1.5,1.02,0.03,">1 nonsynonymous","D59E N107V K128F T148L",4
"lib1","SARS-CoV-2","ATGGTCAGCCACCCTA",3,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M T15R G51C L95T G146A",5
"lib1","SARS-CoV-2","ATGGTCAGTCTTACCG",2,55.52,9,-1.76,0.17,1.5,1.17,0.01,">1 nonsynonymous","N30L A42H G83V",3
"lib1","SARS-CoV-2","ATGGTCATGAGGCGAG",1,28.35,6,-4.76,2,1.69,1.11,0,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","ATGGTCCTCAGTTCCC",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K G86V L95A",3
"lib1","SARS-CoV-2","ATGGTCCTCGGGATTA",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S R27T C49R C61G K128I Q168C",6
"lib1","SARS-CoV-2","ATGGTCGACTGGTTGA",2,29.31,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","I28A P82R P161T",3
"lib1","SARS-CoV-2","ATGGTCGGTTCAGACG",4,0.13,NA,NA,NA,NA,NA,NA,"stop","S53L G196*",2
"lib1","SARS-CoV-2","ATGGTCTATAGACCTG",9,0.77,NA,NA,NA,NA,NA,NA,"stop","F12D L95D G101* C150G",4
"lib1","SARS-CoV-2","ATGGTCTATGCCAAAG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","A22D S41* K87D N92M Y119V S129K E154F",7
"lib1","SARS-CoV-2","ATGGTCTCAAACGATA",1,15.86,8.07,-2.69,0.34,1.5,1.13,0.04,">1 nonsynonymous","N64L R127Q",2
"lib1","SARS-CoV-2","ATGGTCTTCATAGGCC",3,15.08,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","D68M W106R",2
"lib1","SARS-CoV-2","ATGGTGAAAAATGGGT",14,4.72,NA,NA,NA,NA,NA,NA,"stop","V20T Y35N D90Y N151*",4
"lib1","SARS-CoV-2","ATGGTGAACTCCTAAG",3,95.96,10.51,-0.26,0.07,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGGTGAATTTTTGCC",4,43.07,9.83,-0.93,0.1,2.27,1.05,0,">1 nonsynonymous","C6H K56I",2
"lib1","SARS-CoV-2","ATGGTGACTGAGATTC",5,30.03,8.76,-2.01,0.36,1.5,1.04,0.04,">1 nonsynonymous","S43T G86D K128L",3
"lib1","SARS-CoV-2","ATGGTGAGTAGTACAT",8,14.83,NA,NA,NA,NA,NA,NA,"stop","E10R E141F G152L N157*",4
"lib1","SARS-CoV-2","ATGGTGCAACAGGTGC",7,25.07,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","C49L V77E A81V D97K S139R",5
"lib1","SARS-CoV-2","ATGGTGCCGTCACCAT",6,12.44,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D59R C102R R127A P149S Y165G",5
"lib1","SARS-CoV-2","ATGGTGCGACCCGACT",2,77.48,9.96,-0.8,0.12,2.24,1.06,0.01,">1 nonsynonymous","V11T Q163W",2
"lib1","SARS-CoV-2","ATGGTGCGACCCTTAA",2,47.3,10.38,-0.39,0.11,2.86,1,0,">1 nonsynonymous","C61L D90T",2
"lib1","SARS-CoV-2","ATGGTGGTCGAGTCCG",7,149.11,8.44,-2.33,0.14,2.12,1.1,0.01,">1 nonsynonymous","V37R C61A S69Q Y119S",4
"lib1","SARS-CoV-2","ATGGTGTATTAACTAA",6,94.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39S F99C",2
"lib1","SARS-CoV-2","ATGGTGTGCAATTATA",4,13.86,10.26,-0.5,0.24,1.87,1.11,0.03,">1 nonsynonymous","V11N S41K",2
"lib1","SARS-CoV-2","ATGGTTAAGATAAGTT",5,1.93,NA,NA,NA,NA,NA,NA,"stop","R16M L38N L57G I88* F126N S139T A190*",7
"lib1","SARS-CoV-2","ATGGTTAAGATCTGAA",4,138.55,10.83,0.06,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGGTTAATTAAATTC",9,65.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V20R G172E",2
"lib1","SARS-CoV-2","ATGGTTACAAAGAAGT",7,63.76,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F134T G172R S200V",3
"lib1","SARS-CoV-2","ATGGTTACCGATGCAA",5,13.89,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","A14Y K48M K87G T100R K128S E141P S184G",7
"lib1","SARS-CoV-2","ATGGTTACTTTGTAGC",8,23.65,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I2N V103S N107T",3
"lib1","SARS-CoV-2","ATGGTTATCTAGAGAA",16,5.7,NA,NA,NA,NA,NA,NA,"stop","V77L D112* Q176V K198E",4
"lib1","SARS-CoV-2","ATGGTTCCAACATATG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","A105N G155* S184* P197W",4
"lib1","SARS-CoV-2","ATGGTTCCATAAGAAC",2,24.47,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","T55F F70D V77W R179P",4
"lib1","SARS-CoV-2","ATGGTTCGCAGATAAT",3,1.73,NA,NA,NA,NA,NA,NA,"stop","K87G N120S G174*",3
"lib1","SARS-CoV-2","ATGGTTCTATATGTAT",2,17.06,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","T3I F8D L60H A81V D112S F134L E141V",7
"lib1","SARS-CoV-2","ATGGTTGAAACTCTAC",8,146.16,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","ATGGTTGACTTTCAAA",4,67.54,10.69,-0.07,0.06,2.9,1.07,0,"1 nonsynonymous","T3I",1
"lib1","SARS-CoV-2","ATGGTTGCCATTCGCA",5,7.6,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C49G A81L A89L A105L R136C G166S",6
"lib1","SARS-CoV-2","ATGGTTTAAATTTAAC",2,56.19,7.97,-2.79,0.26,1.5,1.13,0.02,">1 nonsynonymous","I28L V77R G117R V173L",4
"lib1","SARS-CoV-2","ATGGTTTAAGAAAAAG",3,53.95,9.8,-0.97,0.14,2.1,1.02,0.01,">1 nonsynonymous","D59P G155C",2
"lib1","SARS-CoV-2","ATGGTTTACTTTAAAA",5,61.11,10.66,-0.11,0.04,2.92,1.04,0,"1 nonsynonymous","N109R",1
"lib1","SARS-CoV-2","ATGGTTTCAATATACA",1,5.59,10.99,0.23,0.13,2.91,1,0,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","ATGGTTTGTCTAATGT",3,21.17,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y93G W106N Y119L N130L G172T",5
"lib1","SARS-CoV-2","ATGGTTTTCCAACATA",10,19.8,6.35,-4.42,0.65,1.75,1.11,0.03,">1 nonsynonymous","A42L D68I R179G",3
"lib1","SARS-CoV-2","ATGTAAAAACAATACT",1,0,NA,NA,NA,NA,NA,NA,"stop","V32I L38* G146E P161Q",4
"lib1","SARS-CoV-2","ATGTAAAAACATTAAA",5,40.25,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35L C49V Y91S E141K",4
"lib1","SARS-CoV-2","ATGTAAAAATGGCCAA",4,54.01,10.14,-0.63,0.04,2.91,1.02,0,">1 nonsynonymous","P7F S41V C61S",3
"lib1","SARS-CoV-2","ATGTAAAACAAACTTA",7,62.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A18T Y35H A42Q F62A N107H V153I C158S",7
"lib1","SARS-CoV-2","ATGTAAACAATACGGA",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N4A N24A L95D V103* P133M N151P",6
"lib1","SARS-CoV-2","ATGTAAACCATTTGCG",3,20.24,10.48,-0.28,0.05,2.88,1.11,0,"1 nonsynonymous","V65G",1
"lib1","SARS-CoV-2","ATGTAAACCCAGTTTG",1,17.38,9.89,-0.87,0.13,2.44,1.05,0.01,">1 nonsynonymous","G9M C102I",2
"lib1","SARS-CoV-2","ATGTAAACCCGAATAA",2,7.09,7.71,-3.06,0.41,1.58,1.07,0.02,">1 nonsynonymous","A33V G86C",2
"lib1","SARS-CoV-2","ATGTAAACCGACAACG",4,15.66,6,-4.76,2,2.38,1.18,0.02,">1 nonsynonymous","R124A P133K P197V",3
"lib1","SARS-CoV-2","ATGTAAACGAATCGCG",4,203.97,10.79,0.02,0.06,2.95,1.02,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","ATGTAAACGCCAAAAC",1,43.65,9.68,-1.09,0.13,2.59,1.12,0.01,">1 nonsynonymous","D90L S129A S164L P197H",4
"lib1","SARS-CoV-2","ATGTAAACGCCATAAC",2,33.76,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I80M G83P D97Y",3
"lib1","SARS-CoV-2","ATGTAAAGACTCTAAT",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58M V65R Q176A",3
"lib1","SARS-CoV-2","ATGTAAAGCTGGGTGC",14,3.41,NA,NA,NA,NA,NA,NA,"stop","W23* Y50R I88N L162S",4
"lib1","SARS-CoV-2","ATGTAAAGGACATTCC",1,78.7,8.47,-2.29,0.23,1.68,1.14,0.02,">1 nonsynonymous","D34Q D59G G174V",3
"lib1","SARS-CoV-2","ATGTAAAGGTCAACGT",6,19.57,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N4Q A42M K56W G86R N157F",5
"lib1","SARS-CoV-2","ATGTAAAGTGATGCAA",3,5.1,10.1,-0.67,0.29,1.58,1.12,0.04,">1 nonsynonymous","E10T A18V F62T",3
"lib1","SARS-CoV-2","ATGTAAATAAATCCGC",2,18.85,10.75,-0.01,0.09,2.93,1.04,0,"1 nonsynonymous","I138V",1
"lib1","SARS-CoV-2","ATGTAAATACAATTGA",4,46.33,6,-4.76,1.5,1.5,1.14,0.02,">1 nonsynonymous","T85R Y93S N107S Y121I G196W",5
"lib1","SARS-CoV-2","ATGTAAATAGGTTCGA",4,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q A67G K87P P161N",4
"lib1","SARS-CoV-2","ATGTAAATTATAGGCC",3,3.53,NA,NA,NA,NA,NA,NA,"stop","Y123* Y175L",2
"lib1","SARS-CoV-2","ATGTAACACTAACCAC",1,157.91,10.03,-0.74,0.05,2.91,1,0,"1 nonsynonymous","V115C",1
"lib1","SARS-CoV-2","ATGTAACCAGATGACT",3,25.25,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6D V32L A89R T170F V181Q",5
"lib1","SARS-CoV-2","ATGTAACCCACAAAAC",1,26.22,10.7,-0.07,0.04,2.96,1.01,0,">1 nonsynonymous","T46V N151K",2
"lib1","SARS-CoV-2","ATGTAACTAGTCTAGA",3,42.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101F D112S Y123L",3
"lib1","SARS-CoV-2","ATGTAACTGATATACA",6,174.62,10.67,-0.1,0.04,2.93,1.01,0,">1 nonsynonymous","N120I F160H",2
"lib1","SARS-CoV-2","ATGTAACTGTGTCGTG",3,38.79,10.76,0,0.12,2.77,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTAAGAAACCACAA",5,18.65,6.54,-4.22,0.62,1.5,1.01,0.05,">1 nonsynonymous","I2G R27T V103G",3
"lib1","SARS-CoV-2","ATGTAAGACATACGGC",13,135.9,9.35,-1.42,0.2,1.62,1.14,0.02,">1 nonsynonymous","G9K N92C",2
"lib1","SARS-CoV-2","ATGTAAGAGCCTGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","K87I T100R Q168*",3
"lib1","SARS-CoV-2","ATGTAAGATAGGCATA",1,28,10.16,-0.6,0.06,2.87,1.04,0,">1 nonsynonymous","S29T D90C N130Q",3
"lib1","SARS-CoV-2","ATGTAAGATCAATGTG",3,84.78,10.57,-0.2,0.06,2.92,1,0,">1 nonsynonymous","I2K I142Y",2
"lib1","SARS-CoV-2","ATGTAAGCTTGATTAC",4,125.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R73A P82V L95C",3
"lib1","SARS-CoV-2","ATGTAAGGCGGACGAA",3,54.43,9.14,-1.62,0.07,2.83,1.09,0,">1 nonsynonymous","D90L Y119A",2
"lib1","SARS-CoV-2","ATGTAAGTTATACATA",15,156.21,7.78,-2.98,0.3,1.5,1.1,0.03,">1 nonsynonymous","S43F L57A G83V P149D S184I",5
"lib1","SARS-CoV-2","ATGTAATAAAGTTAAT",3,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F Y119T F167K V182P",4
"lib1","SARS-CoV-2","ATGTAATAATACAAAA",1,45.03,10.82,0.06,0.08,2.9,1.03,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","ATGTAATACAGAAGAG",2,10.56,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","K48Y P96R S113L N120Y",4
"lib1","SARS-CoV-2","ATGTAATAGCTAAAAA",2,19.46,9.25,-1.52,0.13,2.79,1.22,0,"1 nonsynonymous","G117R",1
"lib1","SARS-CoV-2","ATGTAATCTCCTCTAT",3,59.25,9.26,-1.5,0.06,2.8,1.11,0,">1 nonsynonymous","S53P Y119E",2
"lib1","SARS-CoV-2","ATGTAATCTGAACCTT",2,25.13,6.25,-4.51,0.74,1.5,1.21,0.02,">1 nonsynonymous","Y50Q G74P W106R G166C",4
"lib1","SARS-CoV-2","ATGTAATGCCGAAAAG",5,59.17,10.76,0,0.07,2.73,1.02,0,"1 nonsynonymous","S36G",1
"lib1","SARS-CoV-2","ATGTAATGGGAGGAAG",4,0.22,NA,NA,NA,NA,NA,NA,"stop","S41* L60S L95N",3
"lib1","SARS-CoV-2","ATGTAATGTTATCGTA",1,9.73,10.84,0.08,0.14,2.9,1.01,0.01,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","ATGTAATTACCCTGGC",7,101.13,10.79,0.02,0.05,2.89,1.03,0,">1 nonsynonymous","V173A T201W",2
"lib1","SARS-CoV-2","ATGTACAAACTTCTGT",2,13.51,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L60R N107H S184N",3
"lib1","SARS-CoV-2","ATGTACAACCCTCAGC",2,15.54,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","Y91G W106G G152V",3
"lib1","SARS-CoV-2","ATGTACAACCCTGTGA",4,0.31,NA,NA,NA,NA,NA,NA,"stop","V77S N130* P177L",3
"lib1","SARS-CoV-2","ATGTACAACTTATCTT",6,3.59,NA,NA,NA,NA,NA,NA,"stop","A14H C61* F62V",3
"lib1","SARS-CoV-2","ATGTACAATCTAGAAT",6,19.89,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","Y93W",1
"lib1","SARS-CoV-2","ATGTACACGTTCTGAC",6,36.99,6.2,-4.56,0.48,1.5,1.19,0.01,">1 nonsynonymous","P96I F99C Y121T V180M",4
"lib1","SARS-CoV-2","ATGTACACTGGTTATG",2,38.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86F Y143M",2
"lib1","SARS-CoV-2","ATGTACAGAAAGTGTT",9,17.19,6.95,-3.81,0.39,1.5,1.14,0.03,">1 nonsynonymous","A42H R124N",2
"lib1","SARS-CoV-2","ATGTACAGGAACCAAA",2,60.31,8.3,-2.46,0.18,1.97,1.09,0.01,">1 nonsynonymous","N58Y D97N Y119C",3
"lib1","SARS-CoV-2","ATGTACAGGTGGGCAA",1,11.71,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","V37S V77F K94S F156P",4
"lib1","SARS-CoV-2","ATGTACATCATGCTCA",5,14.79,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y91F L122E D137F",3
"lib1","SARS-CoV-2","ATGTACATCCTAATCA",5,183.16,10.73,-0.03,0.08,2.87,1.09,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","ATGTACCAAAATGTTG",3,15.07,9.02,-1.75,0.24,1.5,1.05,0.03,"1 nonsynonymous","L183T",1
"lib1","SARS-CoV-2","ATGTACCATAGATAGG",1,40.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40Y Y121S I142P T148Q G174L",5
"lib1","SARS-CoV-2","ATGTACCCGACTTAAA",2,11.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13I K128L F185M",3
"lib1","SARS-CoV-2","ATGTACCGTGAAAACA",2,23.05,10.47,-0.29,0.11,2.98,1.01,0.01,"1 nonsynonymous","E10M",1
"lib1","SARS-CoV-2","ATGTACGATATATAAG",2,46.83,7.48,-3.28,0.28,1.5,1.05,0.03,">1 nonsynonymous","T3F G51W L57K",3
"lib1","SARS-CoV-2","ATGTACGCTGAGTGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","T55L K87I Y143* P149S",4
"lib1","SARS-CoV-2","ATGTACGTACCTAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","D98W Y121*",2
"lib1","SARS-CoV-2","ATGTACGTTGGACAGC",3,6.06,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6V A89S N107L T201M",4
"lib1","SARS-CoV-2","ATGTACTAGACTCCAC",2,12.23,8.48,-2.28,0.17,2.52,1.05,0.02,">1 nonsynonymous","N118M G146T",2
"lib1","SARS-CoV-2","ATGTACTCAGTTAGAC",6,46.13,10.77,0.01,0.07,2.92,1.07,0,">1 nonsynonymous","L122G N151Y",2
"lib1","SARS-CoV-2","ATGTACTTCACTTTAT",2,15.73,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","N58T S69R T100M W106C P149T",5
"lib1","SARS-CoV-2","ATGTACTTCTCTACGT",2,0.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","ATGTAGACGCCATAGG",3,104.98,10.82,0.06,0.08,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTAGATCAAACATT",14,214.9,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","P82K Q84R K87D F167G",4
"lib1","SARS-CoV-2","ATGTAGATCGACCCAA",9,161.25,10.63,-0.14,0.04,2.89,1.04,0,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","ATGTAGCTAGACACAA",2,7.76,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","N107H C150V Q168M S200A",4
"lib1","SARS-CoV-2","ATGTAGCTTAAATCTT",5,87.62,8.66,-2.11,0.14,1.8,1.14,0.01,">1 nonsynonymous","F167L A190V",2
"lib1","SARS-CoV-2","ATGTAGGAGACGGATT",6,32.05,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T15D S19Y C158L",3
"lib1","SARS-CoV-2","ATGTAGGGAGTGACTA",13,167,10.59,-0.17,0.04,2.87,1.06,0,">1 nonsynonymous","A33M F160G",2
"lib1","SARS-CoV-2","ATGTAGTTATAACTAT",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W S41V C49N L57R Y66H Y91D Y175Q L183P",8
"lib1","SARS-CoV-2","ATGTATAAAAAGACCG",7,117.71,9.98,-0.78,0.08,1.97,1.05,0,">1 nonsynonymous","L5E Y91R K132R I138T E154G T201N",6
"lib1","SARS-CoV-2","ATGTATAAAAAGTCAA",7,202.19,10.58,-0.19,0.03,2.88,1.06,0,">1 nonsynonymous","K56T F160L T201M",3
"lib1","SARS-CoV-2","ATGTATAAAACACACA",4,49.22,10.69,-0.07,0.09,2.97,1.03,0,"1 nonsynonymous","Y39E",1
"lib1","SARS-CoV-2","ATGTATAAACGCCAGT",4,76.34,10.07,-0.69,0.06,2.56,1.08,0,">1 nonsynonymous","A81H D98N E141K",3
"lib1","SARS-CoV-2","ATGTATAATAACATAG",1,7.98,6.55,-4.22,0.22,2.95,1.09,0,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","ATGTATAATAGGGCGC",1,8.16,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","A89D T170I",2
"lib1","SARS-CoV-2","ATGTATACAACTGAGA",5,41.03,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R25K G155Y",2
"lib1","SARS-CoV-2","ATGTATACATCCTCGG",6,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71A",1
"lib1","SARS-CoV-2","ATGTATACCTCACAAA",9,0.56,NA,NA,NA,NA,NA,NA,"stop","V37T V77* I138K L187A",4
"lib1","SARS-CoV-2","ATGTATAGAATGATCT",3,24.32,10.46,-0.3,0.15,2.67,1.14,0.01,">1 nonsynonymous","S41R L162V",2
"lib1","SARS-CoV-2","ATGTATATGATAAACA",1,65.38,9.96,-0.8,0.05,2.83,1.02,0,">1 nonsynonymous","N64W K87P A105T",3
"lib1","SARS-CoV-2","ATGTATATGGAGGCTT",6,93.71,10.84,0.08,0.09,2.9,1.04,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","ATGTATCATAGTTCCT",4,0.37,NA,NA,NA,NA,NA,NA,"stop","Y39* S43K",2
"lib1","SARS-CoV-2","ATGTATCATCACCAGA",3,62.57,6.55,-4.22,0.49,1.5,1.24,0.03,">1 nonsynonymous","F12C Y119M",2
"lib1","SARS-CoV-2","ATGTATCATCGATAGC",1,8.9,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V32L C49T F167V V173R Y178N",5
"lib1","SARS-CoV-2","ATGTATCATTCTCAAC",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89F K114Y",2
"lib1","SARS-CoV-2","ATGTATCCGTCCGAAA",2,0.82,NA,NA,NA,NA,NA,NA,"stop","S43T L122* P149F",3
"lib1","SARS-CoV-2","ATGTATGAAATAGTTG",1,29.87,10.7,-0.07,0.07,2.81,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTATGAGCCACAGT",6,5.19,NA,NA,NA,NA,NA,NA,"stop","W23G S43* F62R C150R",4
"lib1","SARS-CoV-2","ATGTATGCCAACACAT",4,48.27,8.8,-1.96,0.22,1.75,1.13,0.02,">1 nonsynonymous","N4S F44I Y121R",3
"lib1","SARS-CoV-2","ATGTATGGGACCTGAA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","C6S N13V G83R N107W D112Y A192*",6
"lib1","SARS-CoV-2","ATGTATGGTTGAAAGT",3,88.17,10.22,-0.54,0.1,2.53,1,0,"1 nonsynonymous","G51L",1
"lib1","SARS-CoV-2","ATGTATGTAGAAATTG",1,52.54,10.52,-0.24,0.07,2.94,1.06,0,"1 nonsynonymous","S29G",1
"lib1","SARS-CoV-2","ATGTATGTCACTACAG",4,32.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G86Y V103P D112C P177K",4
"lib1","SARS-CoV-2","ATGTATGTTCCCGGGA",4,41.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8S Y35G F44P K56Q G86S",5
"lib1","SARS-CoV-2","ATGTATTAAAAGATTT",2,17.46,10.78,0.01,0.06,2.99,1,0,"1 nonsynonymous","N64Y",1
"lib1","SARS-CoV-2","ATGTATTAAAGTCACA",2,92.28,10.79,0.02,0.07,2.87,1.07,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","ATGTATTAGAACAAAT",3,17.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y66N D98F N171S Y178R",4
"lib1","SARS-CoV-2","ATGTATTAGCGCAACA",2,20.95,7.99,-2.78,0.35,1.5,1,0.04,">1 nonsynonymous","F12W P82I",2
"lib1","SARS-CoV-2","ATGTATTATAAGAAAT",2,14.9,8.97,-1.79,0.25,1.8,1,0.03,">1 nonsynonymous","C49F F134G P149M F156E",4
"lib1","SARS-CoV-2","ATGTATTATAAGATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58P Y119A Y143Q",3
"lib1","SARS-CoV-2","ATGTATTATATGTCGG",2,64.71,10.8,0.04,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTATTATATTAAAA",5,54.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V20M G116I E186S",3
"lib1","SARS-CoV-2","ATGTATTATCATTGAA",2,15.11,10.71,-0.06,0.07,2.91,1,0,">1 nonsynonymous","V37Y F160I",2
"lib1","SARS-CoV-2","ATGTATTATCTATCCA",19,171.72,6.49,-4.27,0.38,1.5,1.15,0.01,">1 nonsynonymous","L60A C150K",2
"lib1","SARS-CoV-2","ATGTATTCTTTATACT",5,5.74,NA,NA,NA,NA,NA,NA,"stop","N4A C61E L122* C158H",4
"lib1","SARS-CoV-2","ATGTATTGAACTTAAA",1,17.77,10.84,0.08,0.08,2.94,1.02,0,">1 nonsynonymous","I104V P197T",2
"lib1","SARS-CoV-2","ATGTATTGAAGATTCT",2,66.43,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N1I C158V",2
"lib1","SARS-CoV-2","ATGTATTGCGAGTAGG",2,30.49,10.56,-0.2,0.06,2.83,1.12,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","ATGTATTTTGATTTGC",9,172.28,10.6,-0.16,0.04,2.92,1.05,0,">1 nonsynonymous","S41A T63R",2
"lib1","SARS-CoV-2","ATGTATTTTGTGACTT",2,23.91,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y35R D59L V77S V103F L122E L131V S147F",7
"lib1","SARS-CoV-2","ATGTCAAAAAAATAAA",10,30.71,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","T3I F99C",2
"lib1","SARS-CoV-2","ATGTCAAAAAATAAAA",5,68.24,6,-4.76,1.25,1.5,1.18,0.01,">1 nonsynonymous","F99R N120R E154R",3
"lib1","SARS-CoV-2","ATGTCAAAAACTAAAA",1,17.57,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V65L L95C Y123C E141I",4
"lib1","SARS-CoV-2","ATGTCAAAAGTGAAGT",3,33.1,8.38,-2.39,0.2,1.97,1.13,0.02,">1 nonsynonymous","W106L L125R",2
"lib1","SARS-CoV-2","ATGTCAAAGAATTCAA",2,6.7,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","ATGTCAAAGGTAAGTT",2,66.75,10.19,-0.57,0.12,2.51,1.02,0.01,">1 nonsynonymous","V32A F47L K198I",3
"lib1","SARS-CoV-2","ATGTCAAATAAAGAAA",4,34.22,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R27T D90T F99K T140N",4
"lib1","SARS-CoV-2","ATGTCAAATCGCTCCA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","S41K C61T D68T F126Y P149* V180E",6
"lib1","SARS-CoV-2","ATGTCAAATGCCCTTT",4,121.06,10.79,0.03,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTCAACAATCAACA",4,202.54,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","K56H T85M G101S N107E",4
"lib1","SARS-CoV-2","ATGTCAACGGGCGAAT",5,39.16,10.71,-0.06,0.06,2.83,1.01,0,">1 nonsynonymous","N64H L95V K128S",3
"lib1","SARS-CoV-2","ATGTCAAGTCGTTCCA",2,52.41,10.82,0.06,0.09,2.93,1.02,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","ATGTCAAGTTGAACAT",1,35.93,10.61,-0.15,0.06,2.92,1.08,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","ATGTCAATAATGACTA",6,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V D90F",2
"lib1","SARS-CoV-2","ATGTCAATATTGTGCG",2,99,10.33,-0.43,0.06,2.79,1.04,0,">1 nonsynonymous","F62K N130L",2
"lib1","SARS-CoV-2","ATGTCAATCTACCGTT",5,2.21,NA,NA,NA,NA,NA,NA,"stop","F8* A89V",2
"lib1","SARS-CoV-2","ATGTCAATTTGATAGC",1,23.71,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","D98W C158E G174L",3
"lib1","SARS-CoV-2","ATGTCACAACAGAATG",11,118.94,9.86,-0.91,0.1,1.91,1.05,0,">1 nonsynonymous","A81C D98F",2
"lib1","SARS-CoV-2","ATGTCACAAGCCCCAC",1,9.74,10.36,-0.41,0.07,2.95,1.02,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","ATGTCACCAGAAGGTA",6,120.51,9.46,-1.31,0.08,1.72,1.07,0,">1 nonsynonymous","A33G S41T P96H",3
"lib1","SARS-CoV-2","ATGTCACCCCCTCATG",2,38.62,7.53,-3.23,0.39,1.5,1.03,0.06,">1 nonsynonymous","E135S G146I",2
"lib1","SARS-CoV-2","ATGTCACCTAAACCTA",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C F99N L122F E141Y",4
"lib1","SARS-CoV-2","ATGTCACCTGGGTAGG",5,57.46,10.43,-0.34,0.13,2.76,1.03,0.01,">1 nonsynonymous","T63R F185L",2
"lib1","SARS-CoV-2","ATGTCACGAAATCCAA",4,12.81,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F47C L95E R124S Y165T V173L",5
"lib1","SARS-CoV-2","ATGTCACGATCGAATT",6,54.91,6.37,-4.39,0.49,1.5,1.21,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","ATGTCACTTTGCGAGG",7,29.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D34A G101Q P149A C158R",4
"lib1","SARS-CoV-2","ATGTCACTTTTCCGTT",7,69.94,10.6,-0.16,0.05,2.93,1.03,0,">1 nonsynonymous","G9A T46L T63V",3
"lib1","SARS-CoV-2","ATGTCAGACTATAACG",3,0.09,NA,NA,NA,NA,NA,NA,"stop","Y91G F126L R127*",3
"lib1","SARS-CoV-2","ATGTCAGCTAAGCAAA",5,40,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A14C L95A L125H",3
"lib1","SARS-CoV-2","ATGTCAGCTGTTAGAG",3,21.96,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F70L W106A C150T",3
"lib1","SARS-CoV-2","ATGTCAGTTCCATCTA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L T15S Y35R T100A E141A",5
"lib1","SARS-CoV-2","ATGTCATAACTTTCGC",3,18.48,9.3,-1.46,0.12,2.47,1.08,0.01,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","ATGTCATATGTTGTGT",4,101.71,7.17,-3.59,0.25,1.63,1.22,0.01,">1 nonsynonymous","C61K G83R C158S",3
"lib1","SARS-CoV-2","ATGTCATCAGACGCGT",8,93.17,6.43,-4.33,0.61,1.5,1.21,0.03,">1 nonsynonymous","A42Q A89I A105C Y143F",4
"lib1","SARS-CoV-2","ATGTCATCCACCCAGG",13,121.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5K N30F V71K I142W",4
"lib1","SARS-CoV-2","ATGTCCACAAAATAGG",7,53.65,10.83,0.06,0.07,2.86,1.06,0,">1 nonsynonymous","L122K E135K",2
"lib1","SARS-CoV-2","ATGTCCACCAACTGCT",5,53.59,10.83,0.06,0.07,2.94,1.04,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATGTCCACTATATCAT",5,0.99,NA,NA,NA,NA,NA,NA,"stop","D59* K94I K114R F185S",4
"lib1","SARS-CoV-2","ATGTCCATAAGCCAAA",2,14.62,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G101C T140R C158S G166I V173K",5
"lib1","SARS-CoV-2","ATGTCCATCTTTACTC",2,18.77,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D112E N157S T201S",3
"lib1","SARS-CoV-2","ATGTCCATTGATTAAT",2,59.38,6.71,-4.05,0.28,1.5,1.18,0.01,">1 nonsynonymous","V37E R136N G152I",3
"lib1","SARS-CoV-2","ATGTCCCAAATTATAA",5,0,NA,NA,NA,NA,NA,NA,"stop","A67S P82Y D90* L95K",4
"lib1","SARS-CoV-2","ATGTCCCCTCATGCTC",9,173.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T46I G83T R179M",3
"lib1","SARS-CoV-2","ATGTCCCGACCAAACC",3,135.2,10.74,-0.02,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATGTCCCTAGTAGAAG",1,34.26,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K87S D112F",2
"lib1","SARS-CoV-2","ATGTCCCTCTCTTTCA",16,103.2,10.6,-0.16,0.03,2.95,1.04,0,">1 nonsynonymous","L5N A33K Y35F",3
"lib1","SARS-CoV-2","ATGTCCCTTGAGAATA",9,67.11,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","N92G Y123G",2
"lib1","SARS-CoV-2","ATGTCCGGGCAACATT",2,46.36,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y50N F70S Q144V V180A",4
"lib1","SARS-CoV-2","ATGTCCGGTAATTAAT",3,89.65,10.07,-0.7,0.07,2.79,1.05,0,">1 nonsynonymous","C6M Y123K",2
"lib1","SARS-CoV-2","ATGTCCTACATGCAAC",11,0.73,NA,NA,NA,NA,NA,NA,"stop","C6S S41T D97S L183*",4
"lib1","SARS-CoV-2","ATGTCCTACTGAAATA",1,33.52,10.58,-0.18,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTCCTAGCTAGACT",6,63.01,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T100I S129C D137Q C150T",4
"lib1","SARS-CoV-2","ATGTCCTTAAGTACAA",7,103.22,10.55,-0.22,0.05,2.93,1,0,">1 nonsynonymous","A42T T55Q T140W F160A",4
"lib1","SARS-CoV-2","ATGTCGAACGATACAC",3,40.9,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35S T63N V65I G86L K94S",5
"lib1","SARS-CoV-2","ATGTCGAAGCATGATA",2,16.3,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G83C A105L V115Y R124A S184P",5
"lib1","SARS-CoV-2","ATGTCGACCATGTCTT",4,10.35,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T55R V103Q F160C",3
"lib1","SARS-CoV-2","ATGTCGACGGGCAAAG",8,30.4,8.82,-1.94,0.28,1.5,1.13,0.04,">1 nonsynonymous","F12N D59N",2
"lib1","SARS-CoV-2","ATGTCGAGAAGATACT",1,10.57,10.26,-0.51,0.1,2.82,1.1,0,"1 nonsynonymous","T15F",1
"lib1","SARS-CoV-2","ATGTCGATTCTAGCCT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y D137G",2
"lib1","SARS-CoV-2","ATGTCGCATATTCTAG",3,0.29,NA,NA,NA,NA,NA,NA,"stop","K132T S184*",2
"lib1","SARS-CoV-2","ATGTCGCCTGACTCGT",16,293.95,10.15,-0.61,0.08,2.65,1.01,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","ATGTCGCTATTTGTAT",1,11.64,10.26,-0.5,0.24,2.79,1,0.01,">1 nonsynonymous","F47Y P54S N64Y",3
"lib1","SARS-CoV-2","ATGTCGCTTGCGTAAA",1,78.95,10.45,-0.32,0.05,2.86,1.04,0,">1 nonsynonymous","A33M I138F",2
"lib1","SARS-CoV-2","ATGTCGGCCACAAAAG",3,6.32,6.22,-4.54,1,1.5,1.22,0.05,">1 nonsynonymous","G51M N58V G166R",3
"lib1","SARS-CoV-2","ATGTCGGCGATACGGG",1,32.27,9.22,-1.54,0.13,2.62,1.19,0.01,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","ATGTCGGTATTTAAAA",2,38.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y119N D137W G146L P177R",4
"lib1","SARS-CoV-2","ATGTCGGTCATACTAA",2,22.24,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","T15S K94I T100R G174R",4
"lib1","SARS-CoV-2","ATGTCGGTCCAAAGAC",1,9.21,6,-4.76,2,3,1.07,0,">1 nonsynonymous","R27L P82Q Q144E N171G",4
"lib1","SARS-CoV-2","ATGTCGTGAATAGACC",2,1.33,NA,NA,NA,NA,NA,NA,"stop","K48E K87* D112R",3
"lib1","SARS-CoV-2","ATGTCGTTAATGCATC",2,43.32,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9M F62S C102F V173Q",4
"lib1","SARS-CoV-2","ATGTCTAATCGACACT",5,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y V77L N92V S113F P161Y",5
"lib1","SARS-CoV-2","ATGTCTAGAGTATCTA",3,36.58,6.01,-4.75,0.53,1.5,1.11,0,">1 nonsynonymous","A89M P96R Y178S",3
"lib1","SARS-CoV-2","ATGTCTAGATTACCGG",6,1.17,NA,NA,NA,NA,NA,NA,"stop","W23P V52H V103Y Y123*",4
"lib1","SARS-CoV-2","ATGTCTATGCTTCAAC",2,7.19,10.83,0.07,0.14,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTCTCACCGAAAGG",3,97.66,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C6D N107S I138V Y175A",4
"lib1","SARS-CoV-2","ATGTCTCACCGTAGTA",3,42.34,6.08,-4.68,1.03,1.5,1.2,0.03,">1 nonsynonymous","T55C F99L S113R",3
"lib1","SARS-CoV-2","ATGTCTCAGGGGTTTG",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46M C61Q F99W N109K T140W T148R",6
"lib1","SARS-CoV-2","ATGTCTCAGGTTCTAG",6,177.4,10.1,-0.66,0.07,2.66,1.04,0,">1 nonsynonymous","L57T N151M",2
"lib1","SARS-CoV-2","ATGTCTCATAATCAAG",2,19.56,10.73,-0.04,0.09,2.95,1,0,"1 nonsynonymous","L122A",1
"lib1","SARS-CoV-2","ATGTCTCATACCAATT",2,5.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D112L V173S",2
"lib1","SARS-CoV-2","ATGTCTGACATACCTG",4,46.48,7.79,-2.97,0.4,1.5,1.07,0.07,">1 nonsynonymous","P82T T100Y S164I",3
"lib1","SARS-CoV-2","ATGTCTGATTCAGTCG",3,66.17,10.06,-0.7,0.08,2.65,1.03,0,">1 nonsynonymous","Y123E N130R",2
"lib1","SARS-CoV-2","ATGTCTGGTGATATTG",6,156.56,10.02,-0.74,0.07,2.54,1.02,0,">1 nonsynonymous","G9L T55L Q84H",3
"lib1","SARS-CoV-2","ATGTCTGTCTAGCTTA",1,5.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q S129K",2
"lib1","SARS-CoV-2","ATGTCTTACAGAGATA",5,67.07,6.02,-4.75,1.33,1.5,1.21,0.03,">1 nonsynonymous","D112L Y143E G155S",3
"lib1","SARS-CoV-2","ATGTCTTCATGATCAA",1,7.25,6.32,-4.45,1.29,3,1.09,0.01,">1 nonsynonymous","L95R A145V",2
"lib1","SARS-CoV-2","ATGTCTTGAATGTACG",7,130.35,10.78,0.02,0.05,2.92,1.04,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","ATGTCTTGGGTCCGGA",8,52.89,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F12S Q84L Y119T T201Y",4
"lib1","SARS-CoV-2","ATGTGAAAAATCTATT",7,64.78,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","V11H C61P P82K K87N N92R F99S",6
"lib1","SARS-CoV-2","ATGTGAAAATACACTG",1,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23N R124H K132V",3
"lib1","SARS-CoV-2","ATGTGAAAATGGTCAC",1,72.33,8.94,-1.83,0.14,1.64,1.14,0.01,">1 nonsynonymous","Y39W G51A D59L",3
"lib1","SARS-CoV-2","ATGTGAAAATTAAACC",6,45.6,9.67,-1.1,0.22,1.5,1.12,0.02,">1 nonsynonymous","V11D T46I T63V",3
"lib1","SARS-CoV-2","ATGTGAAACGCAATGA",3,38.96,9.1,-1.67,0.11,2.68,1.19,0.01,">1 nonsynonymous","C6Q F156L",2
"lib1","SARS-CoV-2","ATGTGAAATTCTAACT",4,12.82,6,-4.76,2,3,1.05,0,">1 nonsynonymous","V71K I104L",2
"lib1","SARS-CoV-2","ATGTGAACCTGACAAT",11,42.42,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N58S I138H L183Q",3
"lib1","SARS-CoV-2","ATGTGAACTCACGTCA",1,68.14,9.86,-0.91,0.09,2.27,1.04,0,">1 nonsynonymous","T85C P133H T201Y",3
"lib1","SARS-CoV-2","ATGTGAACTCATGGTC",1,11.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W106R L111P P149Q",3
"lib1","SARS-CoV-2","ATGTGAAGGGACGAGA",5,42.43,9.61,-1.15,0.27,1.76,1.17,0.02,"1 nonsynonymous","F8R",1
"lib1","SARS-CoV-2","ATGTGAAGTATAATTA",5,44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30M S43T D59G D90P",4
"lib1","SARS-CoV-2","ATGTGAATAGGTTTTT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","G9K I28*",2
"lib1","SARS-CoV-2","ATGTGAATCCTGATGA",2,49.42,10.55,-0.22,0.04,2.9,1.05,0,">1 nonsynonymous","L122V G174R",2
"lib1","SARS-CoV-2","ATGTGAATTCGCATGT",1,11.79,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S53P D68N P149M",3
"lib1","SARS-CoV-2","ATGTGACATCTTTGTA",7,9.58,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","D34I F70R",2
"lib1","SARS-CoV-2","ATGTGACCTTCATATA",1,7.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43V D68E E141D",3
"lib1","SARS-CoV-2","ATGTGACGCTGATATG",10,239.64,10.61,-0.15,0.04,2.92,1.04,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","ATGTGACGGCAACTGA",3,30.79,7.04,-3.72,0.38,1.5,1.19,0.04,">1 nonsynonymous","P7D V77P K199T",3
"lib1","SARS-CoV-2","ATGTGACGGTCCGTAT",2,41.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37M T85F V103I G146P",4
"lib1","SARS-CoV-2","ATGTGACGTAAGCGGG",6,6.33,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13Q L38W S43M T55V I72M G83W A105P",7
"lib1","SARS-CoV-2","ATGTGACTAAAGTCCT",3,51.87,9.65,-1.12,0.13,1.88,1.09,0.01,">1 nonsynonymous","T15G R78Q D90G",3
"lib1","SARS-CoV-2","ATGTGACTAGTGTAAC",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S T140F",2
"lib1","SARS-CoV-2","ATGTGACTGCCGTTCG",1,6.2,9.8,-0.96,0.14,2.21,1,0,"1 nonsynonymous","F8Q",1
"lib1","SARS-CoV-2","ATGTGAGAAACGATAA",3,59.02,9.96,-0.8,0.12,2.55,1.03,0,">1 nonsynonymous","N13C T100C",2
"lib1","SARS-CoV-2","ATGTGAGAATTACGTT",5,0.48,NA,NA,NA,NA,NA,NA,"stop","T3H K87P K128A V153* G172L",5
"lib1","SARS-CoV-2","ATGTGAGAGTATAAAA",1,28.57,10.66,-0.11,0.1,2.91,1.04,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATGTGAGCGAATCATA",4,7.61,7.68,-3.08,0.44,1.5,1.01,0.05,">1 nonsynonymous","C61R G83H A105K",3
"lib1","SARS-CoV-2","ATGTGAGGCATGTAAA",3,54.43,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Q84P P133N",2
"lib1","SARS-CoV-2","ATGTGATAAATAAGAA",1,18.89,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","Y39M D59E F99M N110H G146P G155V T170V L183A",8
"lib1","SARS-CoV-2","ATGTGATAAATACTAC",3,0.42,NA,NA,NA,NA,NA,NA,"stop","T55Y R73* A81V T85D",4
"lib1","SARS-CoV-2","ATGTGATAATCAACAC",7,60.97,9.93,-0.84,0.1,2.01,1.04,0,">1 nonsynonymous","I2E N13I T201Y",3
"lib1","SARS-CoV-2","ATGTGATACCAGGCGC",6,21.63,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F17R D34I",2
"lib1","SARS-CoV-2","ATGTGATCCTCTTAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","W106D G152* K199S",3
"lib1","SARS-CoV-2","ATGTGATCGAATCGAC",7,85.53,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L57C V77D P82N V153S",4
"lib1","SARS-CoV-2","ATGTGATCGCTATGCG",12,228.52,8.46,-2.31,0.13,1.95,1.11,0.01,">1 nonsynonymous","Y123T N157S",2
"lib1","SARS-CoV-2","ATGTGATCTCTGACCT",1,18.44,8.46,-2.31,0.23,1.91,1.23,0.03,">1 nonsynonymous","K114M P149R Y165M",3
"lib1","SARS-CoV-2","ATGTGATGAAATTCCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103K Y121A G155N Q168E",4
"lib1","SARS-CoV-2","ATGTGATGATAATCCG",2,22.83,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","I2L V71Q G83V A190M",4
"lib1","SARS-CoV-2","ATGTGATGCTTCATAA",1,15.69,8.6,-2.16,0.11,1.78,1.03,0.01,">1 nonsynonymous","G86D S129K E141S",3
"lib1","SARS-CoV-2","ATGTGATGTTAGAACT",1,24.55,9.77,-1,0.13,2,1.05,0.01,">1 nonsynonymous","A14Y I138A",2
"lib1","SARS-CoV-2","ATGTGATTTTCAAATG",4,32.06,6,-4.76,2,3,1.29,0.03,">1 nonsynonymous","T15V F167V",2
"lib1","SARS-CoV-2","ATGTGCACCAAGACGT",3,32.25,10.02,-0.74,0.07,2.75,1.04,0,">1 nonsynonymous","V77L N107A",2
"lib1","SARS-CoV-2","ATGTGCACGGCGCAAT",4,44.61,10.3,-0.46,0.08,2.46,1,0,">1 nonsynonymous","N4M Y121L T140D N151D Q163Y",5
"lib1","SARS-CoV-2","ATGTGCAGAAACTAGT",1,88.4,10.05,-0.72,0.08,2.02,1.05,0,">1 nonsynonymous","N1I L60V V65R",3
"lib1","SARS-CoV-2","ATGTGCAGGAGTTTAT",5,38.92,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","V11R C49M G146W E154F G166R",5
"lib1","SARS-CoV-2","ATGTGCAGGTTAGTCT",3,24.41,10.88,0.11,0.07,2.96,1,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","ATGTGCATAGACTACC",5,21.96,10.5,-0.27,0.07,2.91,1,0,">1 nonsynonymous","N13H Y39T F62L",3
"lib1","SARS-CoV-2","ATGTGCCAAAGCAAAA",2,30.35,9.99,-0.77,0.15,2.28,1.02,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","ATGTGCCAGGAAAAAA",1,12.15,9.14,-1.63,0.13,2.87,1.09,0.02,">1 nonsynonymous","V32K Y91M Y121L",3
"lib1","SARS-CoV-2","ATGTGCCATTAAACGG",6,91.42,10.13,-0.64,0.04,2.93,1,0,">1 nonsynonymous","Q84T N118D S200F",3
"lib1","SARS-CoV-2","ATGTGCCCAAAAAGTA",2,13.82,10.7,-0.06,0.17,2.85,1.02,0.01,">1 nonsynonymous","T3Q P54R",2
"lib1","SARS-CoV-2","ATGTGCCCGTGCCCGG",5,49.64,8.63,-2.14,0.3,1.5,1.12,0.04,">1 nonsynonymous","C6G G51Y",2
"lib1","SARS-CoV-2","ATGTGCCCTCTAATAT",14,66.94,9.45,-1.31,0.17,1.69,1.22,0.01,">1 nonsynonymous","S41V W106S",2
"lib1","SARS-CoV-2","ATGTGCTATAGATTTA",2,7.35,NA,NA,NA,NA,NA,NA,"stop","F17* I72Y",2
"lib1","SARS-CoV-2","ATGTGCTTGCAGGCAA",9,1.31,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib1","SARS-CoV-2","ATGTGGAACAAAATCA",9,204.75,10.62,-0.14,0.03,2.91,1.02,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","ATGTGGAACTGGTTCT",10,123.34,10.77,0.01,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTGGACATTCGAGT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","R25* F167S",2
"lib1","SARS-CoV-2","ATGTGGCGTTAGGCAG",1,10.23,7.88,-2.88,0.31,2.45,1.2,0.04,">1 nonsynonymous","F70L I104Q L125T P133N T140R V173A P177A",7
"lib1","SARS-CoV-2","ATGTGGCTATACAAAG",7,43.34,10.42,-0.35,0.06,2.89,1.05,0,">1 nonsynonymous","L5T D98C",2
"lib1","SARS-CoV-2","ATGTGGCTGGAAATTT",6,68.31,10.77,0,0.09,2.93,1.03,0,">1 nonsynonymous","I2W Y39E",2
"lib1","SARS-CoV-2","ATGTGGGTCGGTATAA",6,74.87,10.02,-0.74,0.14,2.09,1.01,0.01,">1 nonsynonymous","D137S T201R",2
"lib1","SARS-CoV-2","ATGTGGTAAACAAAAT",2,148.61,10.7,-0.06,0.06,2.94,1.03,0,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","ATGTGGTATAAAAGTT",8,2.51,NA,NA,NA,NA,NA,NA,"stop","S41Y R127* T140R V180M",4
"lib1","SARS-CoV-2","ATGTGGTTATGGGCTG",6,56.42,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","W23D V32L N40P V71E K87M Y119L E135S K198Q",8
"lib1","SARS-CoV-2","ATGTGTAAGAGAAGGA",4,3.01,NA,NA,NA,NA,NA,NA,"stop","Y35* A42V F99I G117M V173Y Y178P",6
"lib1","SARS-CoV-2","ATGTGTACTCAGATTT",1,13.7,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C6A W106P K132D T148V",4
"lib1","SARS-CoV-2","ATGTGTATTTATATAA",5,59.78,10.7,-0.07,0.06,2.89,1.04,0,"1 nonsynonymous","A190V",1
"lib1","SARS-CoV-2","ATGTGTCAACGATACG",3,0,NA,NA,NA,NA,NA,NA,"stop","N1D V37C A105F Y119*",4
"lib1","SARS-CoV-2","ATGTGTCCCGATCTAT",1,21.55,6,-4.76,2,3,1.31,0.02,">1 nonsynonymous","A42W G74M N120K I142H",4
"lib1","SARS-CoV-2","ATGTGTCGCCTGAGCA",3,49.63,10.45,-0.32,0.05,2.91,1.04,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","ATGTGTCTAATAATAG",3,14.45,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F12N S29K N64R T100N A105R T148V",6
"lib1","SARS-CoV-2","ATGTGTGAGGATAAAG",6,114.2,10.33,-0.44,0.03,2.93,1.04,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","ATGTGTGGTCTAATAA",6,44.95,9.92,-0.85,0.14,2.21,1.03,0.01,">1 nonsynonymous","K56T A89G",2
"lib1","SARS-CoV-2","ATGTGTGTGGTCCATA",1,64.35,9.35,-1.41,0.13,1.76,1.17,0.01,">1 nonsynonymous","F44L F62C G83Q E141F",4
"lib1","SARS-CoV-2","ATGTGTTAACGATATA",1,11.06,9.96,-0.81,0.1,2.84,1.07,0.01,">1 nonsynonymous","G83K T170M",2
"lib1","SARS-CoV-2","ATGTGTTCAAACAAAA",4,58.24,10.75,-0.02,0.05,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTGTTCGAGCGGTT",5,59.56,6.2,-4.56,0.99,1.5,1.2,0.03,">1 nonsynonymous","F8N N107L",2
"lib1","SARS-CoV-2","ATGTTAAAAAAATGAA",1,7.44,10.76,-0.01,0.18,2.64,1.17,0.01,"1 nonsynonymous","R16I",1
"lib1","SARS-CoV-2","ATGTTAAAAACAACAA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V Q144V",2
"lib1","SARS-CoV-2","ATGTTAAAAATAACGA",1,14.47,8.54,-2.23,0.29,1.5,1.06,0.02,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","ATGTTAAATATATCTT",15,310.38,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F17L K48Y F99M Y123H I138A T148D F156L",7
"lib1","SARS-CoV-2","ATGTTAAATATGATAC",2,28.49,10.31,-0.46,0.08,2.8,1.14,0,">1 nonsynonymous","S36K F185L",2
"lib1","SARS-CoV-2","ATGTTAAATATTAGAA",1,14.47,6.53,-4.24,0.78,1.5,1.27,0.06,">1 nonsynonymous","I28P T55S N58T S147H",4
"lib1","SARS-CoV-2","ATGTTAAATCTTAGTA",1,17.46,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","T55Q Y93G R179M",3
"lib1","SARS-CoV-2","ATGTTAAATGATTCAA",1,11.61,8.91,-1.86,0.42,1.5,1,0.06,">1 nonsynonymous","L5V T100P",2
"lib1","SARS-CoV-2","ATGTTAACCATACGTT",1,16.25,9.95,-0.81,0.21,2.55,1.08,0.01,">1 nonsynonymous","S41T Q144L",2
"lib1","SARS-CoV-2","ATGTTAACCCAGCATG",3,70.72,6,-4.76,1.42,1.5,1.17,0.01,">1 nonsynonymous","C61V R73M Y93A R124Q",4
"lib1","SARS-CoV-2","ATGTTAAGCAATTGAA",1,79.08,10.71,-0.05,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTTAATAATCACCT",6,136.51,8.63,-2.14,0.1,2.96,1.05,0,">1 nonsynonymous","Q144P N157E S200L",3
"lib1","SARS-CoV-2","ATGTTAATACTACTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","V77E N92L G146*",3
"lib1","SARS-CoV-2","ATGTTAATGGGTAGAA",4,28.82,6,-4.76,1.07,3,1.13,0,">1 nonsynonymous","R27F Y35I K94P G116L",4
"lib1","SARS-CoV-2","ATGTTAATGGTATAAA",2,15.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11H V65G S129L",3
"lib1","SARS-CoV-2","ATGTTAATTTAAAACG",1,14.16,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F99G T148R",2
"lib1","SARS-CoV-2","ATGTTAATTTTTCTTA",4,56.24,10.33,-0.43,0.04,2.88,1,0,">1 nonsynonymous","D98A K128L",2
"lib1","SARS-CoV-2","ATGTTACAAAAAGAAG",7,33.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89H V115M G166M",3
"lib1","SARS-CoV-2","ATGTTACAAAAAGAAT",3,21.38,7.89,-2.87,0.34,1.5,1.03,0.04,">1 nonsynonymous","L5N G74C K128W S139I C158S",5
"lib1","SARS-CoV-2","ATGTTACAAAATGATA",1,21.4,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","T100I W106T D112H Y123Q Y175A",5
"lib1","SARS-CoV-2","ATGTTACAATAAACAT",1,12.93,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","D34L K56Y D68L A105V",4
"lib1","SARS-CoV-2","ATGTTACAATATTGCC",3,27.77,6.08,-4.68,1.19,1.5,1.2,0.04,">1 nonsynonymous","S45C L60A V65K G83D",4
"lib1","SARS-CoV-2","ATGTTACACTTATGAG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","Y165W N171*",2
"lib1","SARS-CoV-2","ATGTTACCAGCACGAC",3,74.45,10.75,-0.01,0.06,2.95,1.04,0,">1 nonsynonymous","T85S V153S",2
"lib1","SARS-CoV-2","ATGTTACGCATGGGAG",3,83.41,10.77,0,0.07,2.91,1.05,0,"1 nonsynonymous","T100Q",1
"lib1","SARS-CoV-2","ATGTTACTAAAAAGTC",3,43.02,10.19,-0.58,0.11,2.75,1.03,0.01,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","ATGTTACTCTGGGTCA",1,13.94,10.48,-0.29,0.08,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTTACTTTTTAGAC",11,87.27,10.67,-0.09,0.05,2.9,1.07,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","ATGTTAGAAGGACAAA",12,178.06,6,-4.76,1.88,1.5,1.15,0.01,">1 nonsynonymous","I2H D90L L95G Q176R A192L",5
"lib1","SARS-CoV-2","ATGTTAGAATTTCAAT",3,29.96,10.55,-0.21,0.09,2.87,1.11,0,"1 nonsynonymous","I104W",1
"lib1","SARS-CoV-2","ATGTTAGATTTCAAAG",6,79.04,10.3,-0.46,0.04,2.87,1.01,0,"1 nonsynonymous","P133D",1
"lib1","SARS-CoV-2","ATGTTAGCATAGGTTA",5,0.32,NA,NA,NA,NA,NA,NA,"stop","A81R Y91* S147Y",3
"lib1","SARS-CoV-2","ATGTTAGCATGCCTCT",5,42.96,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C49Q Y119S Y143K",3
"lib1","SARS-CoV-2","ATGTTAGCCGCTGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45D L57* N130L E141V C158S T201N",6
"lib1","SARS-CoV-2","ATGTTAGCGAAGTATC",2,23.55,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5W L95Y D98I G116F E141Y",5
"lib1","SARS-CoV-2","ATGTTAGCTGGAAACA",20,181.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F99L C150R",2
"lib1","SARS-CoV-2","ATGTTAGTAGCTCACG",1,7.87,10.75,-0.02,0.08,3,1.02,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","ATGTTAGTATAGTGCG",2,55.13,10.73,-0.04,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTTAGTCAGGTTAT",1,16.88,10.81,0.05,0.12,2.79,1.14,0.01,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","ATGTTAGTGATTAAAC",2,0.8,NA,NA,NA,NA,NA,NA,"stop","L5I D90* N107T Q144F",4
"lib1","SARS-CoV-2","ATGTTAGTGGAGCCGA",10,194.03,10.39,-0.38,0.04,2.83,1.1,0,">1 nonsynonymous","C61E A105T",2
"lib1","SARS-CoV-2","ATGTTAGTTTTCAATT",2,13.29,6.16,-4.6,1.04,1.5,1.19,0.02,">1 nonsynonymous","A14P L38R Q79W Y119P",4
"lib1","SARS-CoV-2","ATGTTATAATGATAAC",1,8.88,10.7,-0.06,0.11,2.94,1,0.01,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","ATGTTATAGAGAGGAG",5,13.93,NA,NA,NA,NA,NA,NA,"stop","S41* D112W N120Q",3
"lib1","SARS-CoV-2","ATGTTATCCAATCGTT",1,35.87,9.58,-1.19,0.12,2.82,1.1,0,">1 nonsynonymous","T63A Y119S",2
"lib1","SARS-CoV-2","ATGTTATCGAAGAAAA",2,17.99,8.76,-2,0.14,2.65,1.1,0.01,">1 nonsynonymous","P7E T46H P54N T170Y S184F",5
"lib1","SARS-CoV-2","ATGTTATGATCCATTT",2,31.68,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T3F S36N A89C G166E Y178L",5
"lib1","SARS-CoV-2","ATGTTATGCAAATTTC",3,65.56,10.33,-0.44,0.04,2.92,1,0,">1 nonsynonymous","F8L A14R G146A",3
"lib1","SARS-CoV-2","ATGTTATTTAAATTGG",11,125.62,10.65,-0.12,0.04,2.92,1.05,0,"1 nonsynonymous","Y175F",1
"lib1","SARS-CoV-2","ATGTTCAAAACATGAA",3,74.75,10.72,-0.05,0.06,2.94,1.03,0,"1 nonsynonymous","F160L",1
"lib1","SARS-CoV-2","ATGTTCAAGACTCGAT",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G Y91L K132F G166M",4
"lib1","SARS-CoV-2","ATGTTCAGTCAAAGCT",1,2.14,NA,NA,NA,NA,NA,NA,"stop","I88N F99*",2
"lib1","SARS-CoV-2","ATGTTCATATGGCGCG",1,22.63,9.67,-1.09,0.14,2.47,1.07,0.01,">1 nonsynonymous","S41H N109V F156T F185I",4
"lib1","SARS-CoV-2","ATGTTCATCCAACAGT",1,1.49,NA,NA,NA,NA,NA,NA,"stop","T85* L122T N130E G146P",4
"lib1","SARS-CoV-2","ATGTTCCACTTCTGTA",1,0.06,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","ATGTTCCCAAAATCCG",3,0.51,NA,NA,NA,NA,NA,NA,"stop","T85L Y119* Y165T",3
"lib1","SARS-CoV-2","ATGTTCCCACCACCGA",7,228.18,10.12,-0.65,0.04,2.86,1.01,0,">1 nonsynonymous","C6M P197K",2
"lib1","SARS-CoV-2","ATGTTCCCGACTCCAT",3,20.56,10.43,-0.33,0.09,2.9,1.04,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","ATGTTCCCGACTTAGT",2,22.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61L A105L T140I G152I",4
"lib1","SARS-CoV-2","ATGTTCCGCTTAAAGA",5,80.21,10.75,-0.01,0.07,2.87,1.09,0,"1 nonsynonymous","S200L",1
"lib1","SARS-CoV-2","ATGTTCCGGGAATCAA",3,40.4,10.64,-0.12,0.05,2.89,1,0,">1 nonsynonymous","A14V S53N P197S",3
"lib1","SARS-CoV-2","ATGTTCCTCTTGACAA",3,47.34,6.95,-3.81,0.35,1.5,1.25,0.03,">1 nonsynonymous","G9T V37E D137R",3
"lib1","SARS-CoV-2","ATGTTCGAAAACACCA",2,30.33,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V20L N92G G116N Y143G P149H A190L",6
"lib1","SARS-CoV-2","ATGTTCGCAACACAAC",7,90.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A33Q F99V Y143G",3
"lib1","SARS-CoV-2","ATGTTCGTTTCGGCGC",1,0.52,NA,NA,NA,NA,NA,NA,"stop","E10L V77S C158L T201*",4
"lib1","SARS-CoV-2","ATGTTCTGATCACCTG",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N A89V W106N N157L V180S",5
"lib1","SARS-CoV-2","ATGTTGAAAACCGCCA",3,71.13,10.48,-0.28,0.06,2.89,1.04,0,"1 nonsynonymous","G9C",1
"lib1","SARS-CoV-2","ATGTTGAAATACTAAT",3,50.95,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I88G L131K",2
"lib1","SARS-CoV-2","ATGTTGACGAGTGTAC",1,1.82,NA,NA,NA,NA,NA,NA,"stop","V77* A145V",2
"lib1","SARS-CoV-2","ATGTTGAGTACACAGC",7,79.37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N4D F167E",2
"lib1","SARS-CoV-2","ATGTTGATAACCGAAC",10,88.99,8.78,-1.98,0.26,1.5,1.04,0.03,">1 nonsynonymous","S41T T85R A105R",3
"lib1","SARS-CoV-2","ATGTTGATAGGTAAGT",4,12.37,10.89,0.13,0.11,2.91,1.02,0,">1 nonsynonymous","K128E Y143F",2
"lib1","SARS-CoV-2","ATGTTGATTAGAACTA",3,24.62,10.11,-0.65,0.1,2.79,1.18,0.01,">1 nonsynonymous","L122Y G166S A190D",3
"lib1","SARS-CoV-2","ATGTTGCAAAGGGCAA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A S164G K199P",3
"lib1","SARS-CoV-2","ATGTTGCAACTAGGGT",3,54.15,8.98,-1.78,0.13,1.77,1.11,0.01,">1 nonsynonymous","S36K N107T E154K",3
"lib1","SARS-CoV-2","ATGTTGCGAATTCCAA",1,17.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82Q P161S Q176V",3
"lib1","SARS-CoV-2","ATGTTGCGGGTCGGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","F12E K128L I142*",3
"lib1","SARS-CoV-2","ATGTTGCTGGATCACA",2,39.48,9.72,-1.04,0.15,2.3,1.03,0.01,">1 nonsynonymous","Y35E K94R",2
"lib1","SARS-CoV-2","ATGTTGCTTAATCCAG",5,117.14,8.23,-2.53,0.12,2.32,1.14,0,">1 nonsynonymous","F156H Q176T",2
"lib1","SARS-CoV-2","ATGTTGGATATCCATT",6,29.53,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I80F P133N Q144I G152A T201C",5
"lib1","SARS-CoV-2","ATGTTGGATTTTCATT",2,10.38,6.04,-4.73,0.91,3,1.1,0.02,">1 nonsynonymous","D34A D68T G155W F160A Y178S",5
"lib1","SARS-CoV-2","ATGTTGTATGTAAGAA",4,60.26,10.71,-0.06,0.09,2.95,1,0,">1 nonsynonymous","L5C N151R S184T",3
"lib1","SARS-CoV-2","ATGTTGTGACGAGGTT",2,60.92,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N40V G51K I142W F156C",4
"lib1","SARS-CoV-2","ATGTTGTTGACATCAA",3,67.96,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N120W S129C F160L Y165H",4
"lib1","SARS-CoV-2","ATGTTGTTTCCAAGAG",4,57.93,10.24,-0.52,0.05,2.89,1.01,0,">1 nonsynonymous","S43T D59K S184F A190V",4
"lib1","SARS-CoV-2","ATGTTTAAAATAACTA",4,0.2,NA,NA,NA,NA,NA,NA,"stop","Y91S T100* L131*",3
"lib1","SARS-CoV-2","ATGTTTAAAGCACCAA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","T15G S19T G51S D59P Y121T F126K F134L G174*",8
"lib1","SARS-CoV-2","ATGTTTAATACTCAAA",4,46.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34L T63E L122C C150S",4
"lib1","SARS-CoV-2","ATGTTTAATTCTAAAT",4,52,9.34,-1.42,0.07,2.83,1.08,0,">1 nonsynonymous","D97I N157S",2
"lib1","SARS-CoV-2","ATGTTTAGAAAATCCA",5,117.85,10.13,-0.64,0.04,2.85,1.03,0,">1 nonsynonymous","S29F D90Q G174H T201R",4
"lib1","SARS-CoV-2","ATGTTTAGGCAAATTT",2,197.26,7.81,-2.96,0.14,2.11,1.2,0.01,"1 nonsynonymous","C158K",1
"lib1","SARS-CoV-2","ATGTTTATACTTGACG",3,46.66,10.51,-0.25,0.05,2.84,1.1,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","ATGTTTATAGTACAAA",8,1.72,NA,NA,NA,NA,NA,NA,"stop","N118* P133L",2
"lib1","SARS-CoV-2","ATGTTTATATCGCTTT",1,16.07,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","A14K N58L C150H G174F",4
"lib1","SARS-CoV-2","ATGTTTATCTACTACA",1,13.54,6,-4.76,2,2.06,1.24,0.02,">1 nonsynonymous","I28H V103S R136Y T201I",4
"lib1","SARS-CoV-2","ATGTTTCAACATTGCC",3,0,NA,NA,NA,NA,NA,NA,"stop","I2* L111G P149E",3
"lib1","SARS-CoV-2","ATGTTTCAAGAAGTAA",1,22.14,10.83,0.06,0.11,2.92,1.04,0.01,">1 nonsynonymous","A42K Q84M L122A K199H",4
"lib1","SARS-CoV-2","ATGTTTCATAGGCAAA",3,117.5,10.42,-0.34,0.05,2.91,1.06,0,">1 nonsynonymous","T55C K198W",2
"lib1","SARS-CoV-2","ATGTTTCGCAATAGTA",4,49.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y93S S139H T148N F160S",4
"lib1","SARS-CoV-2","ATGTTTCTAGGTTGCT",3,0.76,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","ATGTTTCTAGTCTCTC",1,21.92,6,-4.76,1.64,3,1.11,0,">1 nonsynonymous","R27P G51L F134S",3
"lib1","SARS-CoV-2","ATGTTTGAAAGGATTT",1,56.1,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","F17W C49M T140W T148F E154H P177M",6
"lib1","SARS-CoV-2","ATGTTTGACATTCTTA",2,26.56,9.71,-1.05,0.03,2.92,1.05,0,">1 nonsynonymous","K48C Y119R",2
"lib1","SARS-CoV-2","ATGTTTGAGTAAATCG",1,11.92,6,-4.76,2,1.5,1.37,0.03,">1 nonsynonymous","D90F A105N",2
"lib1","SARS-CoV-2","ATGTTTGGTTAAGACG",5,23.56,6,-4.76,1.12,1.5,1.08,0.01,">1 nonsynonymous","V37W K56P A89N L95N G146Q F167V",6
"lib1","SARS-CoV-2","ATGTTTTCAAACGCCT",8,140.45,10.74,-0.02,0.04,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATGTTTTCATGAAATC",6,44.52,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","F12R S41G T55M T85P K94C",5
"lib1","SARS-CoV-2","ATGTTTTCCAAATTGC",1,18.55,6,-4.76,0.78,1.5,1.08,0.01,">1 nonsynonymous","L5C R136V C150I F156S Y175C",5
"lib1","SARS-CoV-2","ATGTTTTGCAGACAAT",3,27.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T15F G86V K114E Y119M K132Q I138T",6
"lib1","SARS-CoV-2","ATGTTTTTGAAGCGAT",3,30.18,10.12,-0.64,0.07,2.84,1.03,0,">1 nonsynonymous","A89V Q168R",2
"lib1","SARS-CoV-2","ATTAAAAAAAAACAAT",1,8.08,6,-4.76,2,3,1.02,0,">1 nonsynonymous","G86P V115L Y123T",3
"lib1","SARS-CoV-2","ATTAAAAAAAAATATA",2,27.68,7.2,-3.56,0.29,1.62,1.22,0.02,">1 nonsynonymous","K94N Y143Q",2
"lib1","SARS-CoV-2","ATTAAAAAAACTAAGC",8,35.2,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A105D N107T",2
"lib1","SARS-CoV-2","ATTAAAAAAACTCACA",8,11.66,6,-4.76,2,1.5,1.37,0.02,">1 nonsynonymous","T3Q S41D L57Y R127L",4
"lib1","SARS-CoV-2","ATTAAAAAACATGTAA",5,135.28,10.52,-0.24,0.05,2.9,1.02,0,">1 nonsynonymous","L5R A22T",2
"lib1","SARS-CoV-2","ATTAAAAAACCCCTTG",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114R P177I R179M",3
"lib1","SARS-CoV-2","ATTAAAAAACTGAAAT",10,271.95,7.83,-2.93,0.2,1.5,1.11,0.01,">1 nonsynonymous","G172C K198E",2
"lib1","SARS-CoV-2","ATTAAAAAAGAGTTAT",7,75.12,10.62,-0.14,0.04,2.93,1.02,0,">1 nonsynonymous","Y35V S45N",2
"lib1","SARS-CoV-2","ATTAAAAAATCATTTA",1,5.3,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","E10S D59P F99D",3
"lib1","SARS-CoV-2","ATTAAAAAATTAAAAA",2,15.85,10.58,-0.19,0.09,2.78,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAAAAATTAGATT",1,50.09,10.73,-0.03,0.07,2.9,1.04,0,">1 nonsynonymous","E10Q D97N",2
"lib1","SARS-CoV-2","ATTAAAAACAAATATT",6,45.19,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23T T55W F167M R179L L187F",5
"lib1","SARS-CoV-2","ATTAAAAACAGACGCA",3,13.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I88E T201M",2
"lib1","SARS-CoV-2","ATTAAAAACATAAAGC",2,16.96,10.57,-0.2,0.15,2.94,1.01,0.01,"1 nonsynonymous","I142F",1
"lib1","SARS-CoV-2","ATTAAAAACGTTCGAT",2,0.73,NA,NA,NA,NA,NA,NA,"stop","N13H G86* V181E",3
"lib1","SARS-CoV-2","ATTAAAAACTGGGGCT",1,14.53,10.43,-0.34,0.06,2.81,1.13,0,">1 nonsynonymous","N40R P54G",2
"lib1","SARS-CoV-2","ATTAAAAAGAATAGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","R27K S36H D68W I80* Y175I V181P",6
"lib1","SARS-CoV-2","ATTAAAAAGAGATAGT",6,160.29,7.4,-3.36,0.25,1.5,1.13,0.02,">1 nonsynonymous","S113P Q168L",2
"lib1","SARS-CoV-2","ATTAAAAAGGGAACAT",7,118.36,10.77,0,0.05,2.88,1.05,0,">1 nonsynonymous","N4T V37R L60Y",3
"lib1","SARS-CoV-2","ATTAAAAATCCAGACT",6,1.04,NA,NA,NA,NA,NA,NA,"stop","F17I V71* K87I T140N G146* F167G G172V",7
"lib1","SARS-CoV-2","ATTAAAACATACAGTA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T F44K N120E F156N",4
"lib1","SARS-CoV-2","ATTAAAACCAACGGGT",1,76.16,9.92,-0.84,0.08,2.81,1.03,0,">1 nonsynonymous","F47C G174M",2
"lib1","SARS-CoV-2","ATTAAAACTACACGCC",5,1.28,NA,NA,NA,NA,NA,NA,"stop","G83T K94S E141N P149*",4
"lib1","SARS-CoV-2","ATTAAAACTCAATAAA",3,12.71,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","A105F S113Y",2
"lib1","SARS-CoV-2","ATTAAAACTCCCACCC",12,106.96,10.09,-0.68,0.06,2.75,1.01,0,">1 nonsynonymous","G9I C31A",2
"lib1","SARS-CoV-2","ATTAAAAGAAAATTTA",6,25.25,8.8,-1.97,0.26,1.5,1.07,0.04,">1 nonsynonymous","I2L L60V L95T E154S T201Y",5
"lib1","SARS-CoV-2","ATTAAAAGAATCCTGC",2,65.39,6,-4.76,0.97,1.5,1.22,0.01,">1 nonsynonymous","L5G G116L N157Y",3
"lib1","SARS-CoV-2","ATTAAAAGAGTAAATA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","S43I C49I N92* D98S A105T",5
"lib1","SARS-CoV-2","ATTAAAAGATGCATAA",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H T85A",2
"lib1","SARS-CoV-2","ATTAAAAGATTTATGG",5,52.69,10.53,-0.23,0.05,2.91,1.05,0,">1 nonsynonymous","E10S A105S",2
"lib1","SARS-CoV-2","ATTAAAAGGACATTCT",4,0.76,NA,NA,NA,NA,NA,NA,"stop","G9V N64K Y119S R136* T140K",5
"lib1","SARS-CoV-2","ATTAAAAGTAAATTTG",3,92.67,10.69,-0.07,0.05,2.93,1.02,0,"1 nonsynonymous","N1Y",1
"lib1","SARS-CoV-2","ATTAAAAGTAAGGATT",13,227.1,9.04,-1.73,0.05,2.86,1.09,0,">1 nonsynonymous","S129R S139K F156E",3
"lib1","SARS-CoV-2","ATTAAAAGTGGTTATA",2,60.02,10.74,-0.03,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAAATAAACTCAT",2,91.48,10.71,-0.05,0.08,2.82,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTAAAATAGCGAATA",8,63.67,10.2,-0.56,0.09,2.41,1.01,0,">1 nonsynonymous","R27E R127H",2
"lib1","SARS-CoV-2","ATTAAAATATCAGTAT",8,29.08,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","V182R",1
"lib1","SARS-CoV-2","ATTAAAATATTTGACA",2,8.39,10.65,-0.12,0.07,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAAATTACGCAAA",2,65.03,10.71,-0.06,0.05,2.93,1.04,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","ATTAAAATTACTGGAC",5,0.64,NA,NA,NA,NA,NA,NA,"stop","S45D G74* G83T",3
"lib1","SARS-CoV-2","ATTAAAATTAGTATTA",6,0,NA,NA,NA,NA,NA,NA,"stop","N157T T201*",2
"lib1","SARS-CoV-2","ATTAAAATTCAATCGC",1,53.23,10.58,-0.18,0.07,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAAATTGAACCTA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","S45Y C49* V173K T201Q",4
"lib1","SARS-CoV-2","ATTAAACAAAGAGTTG",3,29.61,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","C6G A67H L95A T100H W106Y Y119K",6
"lib1","SARS-CoV-2","ATTAAACAAATACGAA",4,63.3,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T63V L95R P149L L162K",4
"lib1","SARS-CoV-2","ATTAAACAACAACACC",14,139.37,10.45,-0.32,0.05,2.85,1.07,0,">1 nonsynonymous","N1Q S41P L122N",3
"lib1","SARS-CoV-2","ATTAAACAATATGCCT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib1","SARS-CoV-2","ATTAAACATACGAAAT",7,133.85,6.21,-4.56,0.62,1.5,1.16,0.02,">1 nonsynonymous","G51P N157E",2
"lib1","SARS-CoV-2","ATTAAACCCAATTTAA",2,27.9,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N40A I88S N118F",3
"lib1","SARS-CoV-2","ATTAAACCCACCCGAA",2,0.79,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","ATTAAACCCGAACCTC",3,36.73,6,-4.76,1.83,1.5,1.12,0.02,">1 nonsynonymous","R16S W23Q I104S P133T G155A",5
"lib1","SARS-CoV-2","ATTAAACGAAACTGAA",5,146.02,8.82,-1.95,0.07,2.84,1.14,0,">1 nonsynonymous","L60K F126T",2
"lib1","SARS-CoV-2","ATTAAACGACTGATCC",8,25.56,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D34Y F99I A105R C150V",4
"lib1","SARS-CoV-2","ATTAAACGAGCCTGGG",2,6.98,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","A105K Y119T S139A",3
"lib1","SARS-CoV-2","ATTAAACTATTGGTCC",1,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M W106R G174S E186V",4
"lib1","SARS-CoV-2","ATTAAACTCACAAATG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Q K94F I104T",3
"lib1","SARS-CoV-2","ATTAAACTCCATTGGT",4,96.82,10.06,-0.7,0.08,2.04,1.07,0,">1 nonsynonymous","R16L T63W T100N",3
"lib1","SARS-CoV-2","ATTAAACTCCTAATTA",3,95.21,10.86,0.09,0.07,2.88,1.06,0,">1 nonsynonymous","T85S D97L L188M",3
"lib1","SARS-CoV-2","ATTAAACTTGCACTAA",8,100.65,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R27S V71W G83P F160D",4
"lib1","SARS-CoV-2","ATTAAAGACTATAATA",1,21.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41E N58K C102W P177I",4
"lib1","SARS-CoV-2","ATTAAAGAGCCACAGT",3,34.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49A F99V D112L",3
"lib1","SARS-CoV-2","ATTAAAGATAAATTTG",4,8.72,6.65,-4.12,0.56,1.5,1.04,0.05,">1 nonsynonymous","C49G K87V K94E K114M V173L",5
"lib1","SARS-CoV-2","ATTAAAGATTAGTCAA",10,57.52,8.38,-2.38,0.23,1.5,1.06,0.02,">1 nonsynonymous","C49V T85A P149T L188M",4
"lib1","SARS-CoV-2","ATTAAAGATTCAGCAG",9,104.92,10.64,-0.12,0.04,2.9,1.03,0,"1 nonsynonymous","V52M",1
"lib1","SARS-CoV-2","ATTAAAGCAAGTTACC",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37M K94P",3
"lib1","SARS-CoV-2","ATTAAAGCGAGACTCA",9,126.08,8.68,-2.09,0.1,2.72,1.13,0,">1 nonsynonymous","V11F G146T V153S",3
"lib1","SARS-CoV-2","ATTAAAGCTGGTAATA",3,9.66,6.6,-4.16,0.65,1.5,1.11,0.05,">1 nonsynonymous","C61F P82M N151V",3
"lib1","SARS-CoV-2","ATTAAAGGACTTTCCC",6,104.31,10.79,0.02,0.05,2.92,1.04,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","ATTAAAGGGTTCAACT",7,105.06,10.66,-0.1,0.03,2.92,1.03,0,">1 nonsynonymous","Y50F A190M",2
"lib1","SARS-CoV-2","ATTAAAGGTCGAGGGT",1,18.37,6.23,-4.54,1.06,1.5,1.09,0.05,">1 nonsynonymous","A14G S139A R179V",3
"lib1","SARS-CoV-2","ATTAAAGTACGCGACT",1,60.95,9.39,-1.38,0.14,1.92,1.11,0.01,"1 nonsynonymous","Y165R",1
"lib1","SARS-CoV-2","ATTAAAGTGACCATGA",2,23.07,10.31,-0.46,0.09,2.81,1.02,0.01,"1 nonsynonymous","A33K",1
"lib1","SARS-CoV-2","ATTAAAGTGTGTATTA",1,0.61,NA,NA,NA,NA,NA,NA,"stop","G9S D68* F99D Q144W",4
"lib1","SARS-CoV-2","ATTAAAGTTGTAATTG",2,6.07,6,-4.76,2,1.5,1.06,0,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","ATTAAATAAAATTGAC",6,60,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C31Y G51V L60G",3
"lib1","SARS-CoV-2","ATTAAATAACTATAAT",1,39.79,10.95,0.19,0.1,2.95,1.02,0,">1 nonsynonymous","D97S L122T N130K",3
"lib1","SARS-CoV-2","ATTAAATAATTCCAAA",6,4.48,NA,NA,NA,NA,NA,NA,"stop","C61S P82T Q168*",3
"lib1","SARS-CoV-2","ATTAAATACACTAAAA",3,5.85,10.03,-0.73,0.08,1.84,1.04,0,">1 nonsynonymous","F62T P161E",2
"lib1","SARS-CoV-2","ATTAAATACATAACAT",13,299.58,10.22,-0.54,0.04,2.88,1.02,0,">1 nonsynonymous","E10S S164G",2
"lib1","SARS-CoV-2","ATTAAATACGCTCAAT",4,19.06,6,-4.76,2,3,1.14,0.02,">1 nonsynonymous","Y91E Y143W",2
"lib1","SARS-CoV-2","ATTAAATAGAAACAAC",1,8.26,6.32,-4.44,1.1,1.5,1.16,0.04,">1 nonsynonymous","C49S Y93P V173S",3
"lib1","SARS-CoV-2","ATTAAATAGATCTCGC",4,85.5,9.16,-1.61,0.15,1.93,1.23,0.01,">1 nonsynonymous","N64V Y121I P133S",3
"lib1","SARS-CoV-2","ATTAAATCACTCTTGA",3,51.98,7.35,-3.41,0.26,1.69,1.18,0.02,"1 nonsynonymous","Y175T",1
"lib1","SARS-CoV-2","ATTAAATCACTGTCCG",4,310.6,10.77,0,0.04,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAATCCACGTAAA",4,42.29,10.06,-0.7,0.11,2.14,1.04,0.01,"1 nonsynonymous","S19K",1
"lib1","SARS-CoV-2","ATTAAATCCCAGAGTA",2,48.14,10.74,-0.02,0.03,2.93,1.04,0,"1 nonsynonymous","K199D",1
"lib1","SARS-CoV-2","ATTAAATCCGCATTAA",2,31.85,10.14,-0.62,0.05,2.93,1,0,"1 nonsynonymous","C31T",1
"lib1","SARS-CoV-2","ATTAAATGACAGCAAG",3,20.07,6.25,-4.51,0.46,1.59,1.18,0.01,">1 nonsynonymous","N40E D90Y T100P L188V",4
"lib1","SARS-CoV-2","ATTAAATGATAGTGCA",12,104.68,10.28,-0.48,0.07,2.19,1,0,">1 nonsynonymous","C49F D97K N171W",3
"lib1","SARS-CoV-2","ATTAAATGATCCGAGC",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95E T148Q Q168L",3
"lib1","SARS-CoV-2","ATTAAATGATGCGAAT",1,48.86,9.96,-0.8,0.1,2.6,1.06,0,">1 nonsynonymous","L38F L60P",2
"lib1","SARS-CoV-2","ATTAAATGATTGGCCT",4,49.68,9.71,-1.05,0.12,2.47,1.12,0.01,">1 nonsynonymous","A22K K26T D97A I104Y P169M",5
"lib1","SARS-CoV-2","ATTAAATGTCCAAGCT",5,64.46,9.45,-1.32,0.07,2.65,1.08,0,">1 nonsynonymous","G9H F44L D97M G146T F160R",5
"lib1","SARS-CoV-2","ATTAAATTAAGGGCCT",1,41.44,10.57,-0.19,0.03,2.89,1.12,0,">1 nonsynonymous","D90L N130A",2
"lib1","SARS-CoV-2","ATTAAATTAATTATGA",2,14.61,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G117H Y143S G155P G174Q",4
"lib1","SARS-CoV-2","ATTAAATTACCACATT",3,30.13,10.04,-0.72,0.16,2.29,1.03,0.01,">1 nonsynonymous","F44R N58L",2
"lib1","SARS-CoV-2","ATTAAATTCATGAATT",7,110.43,7.49,-3.27,0.16,1.75,1.17,0.01,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ATTAAATTTGAACGCA",6,92.29,9.69,-1.08,0.12,2.46,1.06,0.01,">1 nonsynonymous","T3P S43C D59N N118E P149L",5
"lib1","SARS-CoV-2","ATTAAATTTGCATTCT",3,34.91,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F99I I104F S113D F167L",4
"lib1","SARS-CoV-2","ATTAAATTTTACCCAG",4,74.32,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28C D98A C150V Y178V",4
"lib1","SARS-CoV-2","ATTAACAAAAAACTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* L122S E141N",3
"lib1","SARS-CoV-2","ATTAACAAAAAGAGTG",2,67.76,10.7,-0.07,0.05,2.92,1,0,">1 nonsynonymous","L5W N40S",2
"lib1","SARS-CoV-2","ATTAACAAAAAGCGCT",3,21.89,9.09,-1.67,0.13,1.82,1.13,0.01,">1 nonsynonymous","K26T D112I G152Y",3
"lib1","SARS-CoV-2","ATTAACAAAAATCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","ATTAACAAAACAATAC",20,4.39,NA,NA,NA,NA,NA,NA,"stop","W23F S108* C150S E154L T201E",5
"lib1","SARS-CoV-2","ATTAACAAGAAGTACA",7,2.11,NA,NA,NA,NA,NA,NA,"stop","Y91L C158* N171W",3
"lib1","SARS-CoV-2","ATTAACAAGATAACAT",8,55.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3I F99A N110R",3
"lib1","SARS-CoV-2","ATTAACAAGGTATTAC",5,45.25,8.8,-1.97,0.1,2.82,1.07,0,">1 nonsynonymous","C61K G117R P149G",3
"lib1","SARS-CoV-2","ATTAACAAGTTCATAA",4,35.7,10.63,-0.13,0.05,2.94,1.04,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","ATTAACAATACGCCGA",1,11,10.56,-0.2,0.08,2.9,1.11,0,">1 nonsynonymous","T3L K87R",2
"lib1","SARS-CoV-2","ATTAACAATGAAGCGA",2,29.34,7.35,-3.41,0.37,1.5,1,0.04,">1 nonsynonymous","R16G K56Y P96G D98V D137I P149Q P177L",7
"lib1","SARS-CoV-2","ATTAACAATTTCTTCA",1,97.7,10.63,-0.13,0.04,2.93,1.04,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","ATTAACACAAATCGCA",3,55.35,10.58,-0.18,0.06,2.87,1.02,0,">1 nonsynonymous","T3Y D59C",2
"lib1","SARS-CoV-2","ATTAACACATACAACA",2,68.47,10.33,-0.43,0.05,2.85,1.02,0,">1 nonsynonymous","R16L I28V",2
"lib1","SARS-CoV-2","ATTAACACCCCAATGG",4,39.61,8.98,-1.78,0.32,1.5,1,0.04,">1 nonsynonymous","W23S T140F",2
"lib1","SARS-CoV-2","ATTAACACCGACCAAA",2,125.28,10.65,-0.12,0.04,2.97,1.01,0,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","ATTAACACCTGAAACT",2,9.68,10.18,-0.58,0.14,2.76,1,0.01,"1 nonsynonymous","P133V",1
"lib1","SARS-CoV-2","ATTAACACTCCCAAGG",2,121.04,10.64,-0.13,0.03,2.93,1.03,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","ATTAACAGAAGTCTGT",7,22.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41V N92T N110P L122M",4
"lib1","SARS-CoV-2","ATTAACAGACTCAAAC",1,22.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10W Y39K Y50S Y121T",4
"lib1","SARS-CoV-2","ATTAACAGCGCAAAAG",4,22.01,9.73,-1.04,0.2,1.81,1.22,0.01,">1 nonsynonymous","F17G V115L",2
"lib1","SARS-CoV-2","ATTAACAGCTAAATCT",4,1.77,NA,NA,NA,NA,NA,NA,"stop","F44* C158D",2
"lib1","SARS-CoV-2","ATTAACAGGTTGTGAA",2,38.44,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F44M L60V E154V Q176I",4
"lib1","SARS-CoV-2","ATTAACAGTAATGTTA",1,66.83,8.88,-1.88,0.12,2.11,1.13,0.01,">1 nonsynonymous","N24R Y35F V77L A105M G116S G146A",6
"lib1","SARS-CoV-2","ATTAACAGTTTAGCAA",2,33.91,6.75,-4.01,0.29,1.5,1.15,0.01,">1 nonsynonymous","I80M Y121S",2
"lib1","SARS-CoV-2","ATTAACATAAACCGCT",4,39.17,6,-4.76,1.05,1.5,1.11,0.01,">1 nonsynonymous","G9V K56S V65K D98W T201N",5
"lib1","SARS-CoV-2","ATTAACATAAAGAAAC",2,13.17,10.27,-0.49,0.08,2.91,1.01,0,">1 nonsynonymous","K114R R136S",2
"lib1","SARS-CoV-2","ATTAACATACAACGTA",4,67.26,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22T V77K F134G G146A",4
"lib1","SARS-CoV-2","ATTAACATCCAAATAA",4,34.85,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T15I A81L P133D",3
"lib1","SARS-CoV-2","ATTAACATTGCTGAAA",3,48.33,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R25L N64K",2
"lib1","SARS-CoV-2","ATTAACCAATAGCAGA",2,19.75,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68L L95V V103F P197S",4
"lib1","SARS-CoV-2","ATTAACCAATTGGGAC",2,51.96,10.68,-0.09,0.05,2.95,1.03,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","ATTAACCCCGTAATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F44I S184P",3
"lib1","SARS-CoV-2","ATTAACCCTCGACATG",1,43.27,10.13,-0.63,0.1,2.59,1.03,0,">1 nonsynonymous","V52S K198M",2
"lib1","SARS-CoV-2","ATTAACCCTTGTTAAA",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L R78A L95K F134N",4
"lib1","SARS-CoV-2","ATTAACCGTTCACGTA",5,7.7,NA,NA,NA,NA,NA,NA,"stop","F44* P54R T85A G174R",4
"lib1","SARS-CoV-2","ATTAACCTAAATATCA",10,213.57,10.8,0.03,0.07,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAACCTAATACACC",2,97.47,10.41,-0.35,0.07,2.84,1.02,0,">1 nonsynonymous","I2F F47I",2
"lib1","SARS-CoV-2","ATTAACCTAGGCGTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T R16P S113M",3
"lib1","SARS-CoV-2","ATTAACCTGGCTGGAT",5,22.9,6.49,-4.27,0.42,1.5,1.1,0.01,">1 nonsynonymous","N1W L5S R136V Y165L Y178H",5
"lib1","SARS-CoV-2","ATTAACCTTAATAGAA",3,6.89,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","A42C D68K I72S S113Y S200N",5
"lib1","SARS-CoV-2","ATTAACCTTCGACAGT",3,38.8,10.67,-0.09,0.1,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAACCTTTCTTGTA",2,86.86,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N40H P133R Y178R",3
"lib1","SARS-CoV-2","ATTAACGAATCAGAAA",1,8.42,6,-4.76,2,1.5,1.02,0.01,">1 nonsynonymous","T15K Y39R W106L D112T G155D",5
"lib1","SARS-CoV-2","ATTAACGAATCCTAAA",1,11.22,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F62E I88G",2
"lib1","SARS-CoV-2","ATTAACGATGCTCGTT",1,28.45,10.12,-0.65,0.06,2.83,1.02,0,">1 nonsynonymous","S45D S139I",2
"lib1","SARS-CoV-2","ATTAACGATTGAGGTA",2,11.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y66R L95R",2
"lib1","SARS-CoV-2","ATTAACGCAGAAAAAG",8,8.1,NA,NA,NA,NA,NA,NA,"stop","Y91L K132* F160S",3
"lib1","SARS-CoV-2","ATTAACGGAATGAGTA",1,45.21,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y143E G155Y",2
"lib1","SARS-CoV-2","ATTAACGGTAAAATAC",8,58.9,7,-3.77,0.17,1.65,1.14,0.01,">1 nonsynonymous","P7L I142N P149C K198R",4
"lib1","SARS-CoV-2","ATTAACGTATTACTTT",1,35.78,6,-4.76,2,3,1.19,0,">1 nonsynonymous","Y35Q V180A",2
"lib1","SARS-CoV-2","ATTAACGTTATACGAT",1,33.02,8.27,-2.49,0.21,1.5,1.11,0.02,">1 nonsynonymous","Q84K F99Y Y143I K198L",4
"lib1","SARS-CoV-2","ATTAACGTTGAAAATT",1,22.84,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","G101A K128Y",2
"lib1","SARS-CoV-2","ATTAACTAGAACACTA",9,45.02,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","C158F P169R",2
"lib1","SARS-CoV-2","ATTAACTATAATAATA",2,61.36,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4R A89P P177T",3
"lib1","SARS-CoV-2","ATTAACTCAAAAAATA",6,66.51,7.86,-2.9,0.27,1.5,1.12,0.03,">1 nonsynonymous","N107T P133T P197K",3
"lib1","SARS-CoV-2","ATTAACTCTCACCAGT",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L T100N N120K P133F",4
"lib1","SARS-CoV-2","ATTAACTGACTAATTG",2,118.37,10.78,0.01,0.04,2.91,1.03,0,">1 nonsynonymous","S45Y N171Y",2
"lib1","SARS-CoV-2","ATTAACTGGTAATCCT",4,7.45,8.06,-2.7,0.42,1.5,1.09,0.04,">1 nonsynonymous","G86W N130A",2
"lib1","SARS-CoV-2","ATTAACTTCAACGTGT",1,21.68,10.08,-0.69,0.36,1.68,1,0.03,">1 nonsynonymous","N110Q Y123G",2
"lib1","SARS-CoV-2","ATTAACTTCCTAACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38I K56* F99L",3
"lib1","SARS-CoV-2","ATTAACTTTGATATAT",3,22.54,9.7,-1.06,0.09,2.98,1.01,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","ATTAACTTTTCGACGC",11,51.32,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S29F L60R G74W",3
"lib1","SARS-CoV-2","ATTAAGAAAACCTGGA",1,11.06,10.74,-0.02,0.14,2.89,1.11,0.01,">1 nonsynonymous","R27V I138K",2
"lib1","SARS-CoV-2","ATTAAGAACATCTATG",5,39.75,9.86,-0.9,0.1,2.45,1.05,0,">1 nonsynonymous","N4V N107R K198M",3
"lib1","SARS-CoV-2","ATTAAGAACGTGTTCG",5,34.89,10.54,-0.22,0.05,2.87,1.04,0,">1 nonsynonymous","G9V K114M",2
"lib1","SARS-CoV-2","ATTAAGAACTCTCATA",1,17.17,10.08,-0.68,0.1,2.75,1.07,0,">1 nonsynonymous","A33K K56M",2
"lib1","SARS-CoV-2","ATTAAGAACTTAGTGA",6,214.72,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D90E P177D",2
"lib1","SARS-CoV-2","ATTAAGAAGCAGTTTA",1,21.98,7.43,-3.34,0.42,1.5,1,0.08,">1 nonsynonymous","I2K N120C I142S T148V P169E V173S",6
"lib1","SARS-CoV-2","ATTAAGACCGAATTAA",2,6.39,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","F12R V77F T100S",3
"lib1","SARS-CoV-2","ATTAAGAGAGTAAAAT",2,38.93,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C61V G86P Q176R",3
"lib1","SARS-CoV-2","ATTAAGAGGCGGATGT",5,17.6,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D90C F99P I104A P149T R179S",5
"lib1","SARS-CoV-2","ATTAAGAGGCTTGGGG",1,43.61,10.77,0,0.06,2.96,1,0,">1 nonsynonymous","V37F S53F T85A D97S",4
"lib1","SARS-CoV-2","ATTAAGATATGATGTA",2,15.22,7.36,-3.4,0.44,1.5,1.14,0.05,">1 nonsynonymous","L60T C102A",2
"lib1","SARS-CoV-2","ATTAAGATATTCGATC",6,66.66,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4L F17T V103T R136L G166E",5
"lib1","SARS-CoV-2","ATTAAGATGCACGGAT",9,154.45,6.09,-4.68,0.49,1.5,1.2,0.01,">1 nonsynonymous","A14L A89N I142N",3
"lib1","SARS-CoV-2","ATTAAGATGGGGTTAT",2,1085.68,9.81,-0.96,0.21,1.5,1,0.02,">1 nonsynonymous","F17L G51M P96R K128G T148S",5
"lib1","SARS-CoV-2","ATTAAGCAAGTTACCG",2,58.99,10.48,-0.29,0.04,2.94,1.02,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","ATTAAGCACTTTGTAC",1,16.93,10.21,-0.55,0.1,2.75,1.02,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","ATTAAGCCAACACTAA",2,49.33,9.08,-1.68,0.09,2.7,1.13,0,">1 nonsynonymous","D90E G117A",2
"lib1","SARS-CoV-2","ATTAAGCCCTCTGCAA",9,120.21,10.7,-0.06,0.07,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAAGCCTTGGTCAA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","A22S A42* N109F T148* F167A",5
"lib1","SARS-CoV-2","ATTAAGCGCAGACCGT",3,38.28,10.69,-0.07,0.04,2.94,1.02,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","ATTAAGCGTGAGGATT",9,1.27,NA,NA,NA,NA,NA,NA,"stop","R27Q V77E A89V R136* P149E",5
"lib1","SARS-CoV-2","ATTAAGCGTTATTCGG",2,55.89,10.03,-0.73,0.07,2.91,1.02,0,">1 nonsynonymous","T55H K114G",2
"lib1","SARS-CoV-2","ATTAAGCTACTCACGT",10,57.35,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","P7F V20S D98E T148N",4
"lib1","SARS-CoV-2","ATTAAGCTCAACTTAA",4,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M D90L N107G G166S",4
"lib1","SARS-CoV-2","ATTAAGGAGAGTTCCA",1,14.64,10.67,-0.09,0.07,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTAAGGAGATAAATC",1,50.79,8.69,-2.08,0.13,2.22,1.07,0.01,">1 nonsynonymous","L60M D90K Y119H P133Y T201M",5
"lib1","SARS-CoV-2","ATTAAGGAGATTTTGG",5,3.56,NA,NA,NA,NA,NA,NA,"stop","L57I I88* V103F S164F A190Y",5
"lib1","SARS-CoV-2","ATTAAGGATAGAAACT",1,0.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4Q",1
"lib1","SARS-CoV-2","ATTAAGGATGACCGAT",1,53.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38T P82S P96W",3
"lib1","SARS-CoV-2","ATTAAGGCCCAGTTTC",2,27.55,10.74,-0.02,0.08,2.84,1.09,0,"1 nonsynonymous","A22M",1
"lib1","SARS-CoV-2","ATTAAGGGAAGATACA",1,5.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y L95Y V103H",3
"lib1","SARS-CoV-2","ATTAAGGGCCGTAATA",11,88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35M D68V P96G N157I N171D",5
"lib1","SARS-CoV-2","ATTAAGGTAAACGGAC",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V C49L K56H A89R E141L",5
"lib1","SARS-CoV-2","ATTAAGGTACCATAAA",5,79.57,8.35,-2.42,0.13,2.01,1.07,0.01,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","ATTAAGTACTGACATT",1,18.87,9.21,-1.56,0.21,2.25,1.1,0.02,">1 nonsynonymous","A14R V115Q Y159F",3
"lib1","SARS-CoV-2","ATTAAGTAGTTGTTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7D C61Q R73Y V180N",4
"lib1","SARS-CoV-2","ATTAAGTCATAAGGCT",2,43.88,10.47,-0.29,0.08,2.91,1,0,"1 nonsynonymous","K26N",1
"lib1","SARS-CoV-2","ATTAAGTGATTATGGG",3,60.01,10.73,-0.04,0.08,2.86,1.06,0,"1 nonsynonymous","W23F",1
"lib1","SARS-CoV-2","ATTAAGTGCCCAAAAC",1,3.83,NA,NA,NA,NA,NA,NA,"stop","C6S S69L T85R Y121F R136*",5
"lib1","SARS-CoV-2","ATTAAGTTAATAGCGT",2,40.78,9.78,-0.98,0.11,1.87,1.09,0.01,">1 nonsynonymous","I2Y F17M K56Q R136V",4
"lib1","SARS-CoV-2","ATTAAGTTACTGACTA",4,56.81,8.56,-2.21,0.22,1.5,1.06,0.02,">1 nonsynonymous","N4M G146L",2
"lib1","SARS-CoV-2","ATTAAGTTCCACCGAG",1,20.43,6,-4.76,2,3,1.21,0,">1 nonsynonymous","P7S D34A N107G F134T",4
"lib1","SARS-CoV-2","ATTAAGTTTCGCTTCA",2,11.39,10.71,-0.05,0.06,2.86,1.11,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","ATTAAGTTTGAACAAT",2,12.64,8.76,-2,0.26,1.56,1.25,0.04,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","ATTAATAAAAAAATAT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L60* L95F P149T G155K V194I",5
"lib1","SARS-CoV-2","ATTAATAAATTAATTT",2,11.1,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","A33L V77S G86D S164Y",4
"lib1","SARS-CoV-2","ATTAATAAATTGTTCT",5,36.44,9.07,-1.7,0.06,2.92,1.05,0,">1 nonsynonymous","T55C Y119N",2
"lib1","SARS-CoV-2","ATTAATAACATACATA",1,71.39,9.89,-0.87,0.11,2.45,1,0,">1 nonsynonymous","N120V R136V",2
"lib1","SARS-CoV-2","ATTAATAACTAAATAA",8,152.85,10.64,-0.12,0.03,2.93,1.02,0,">1 nonsynonymous","R16I V103I K199F",3
"lib1","SARS-CoV-2","ATTAATAAGGATTAAT",7,20.52,6.45,-4.32,0.28,1.5,1.08,0.01,">1 nonsynonymous","S19V T46V P133T",3
"lib1","SARS-CoV-2","ATTAATAAGTCTTTTA",1,18.78,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","F12H L57D G83S",3
"lib1","SARS-CoV-2","ATTAATAAGTGCGACG",2,58.1,10.59,-0.17,0.06,2.87,1.05,0,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","ATTAATAATAAAAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* A42F G86E N120L Y178M",5
"lib1","SARS-CoV-2","ATTAATAATAAAAGCC",5,7.61,NA,NA,NA,NA,NA,NA,"stop","D34* G83S L125S Y165E",4
"lib1","SARS-CoV-2","ATTAATAATCCTGCAA",1,10.94,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K94A I104L G172H",3
"lib1","SARS-CoV-2","ATTAATAATGTCCAAA",3,27.48,10.33,-0.44,0.08,2.77,1,0,">1 nonsynonymous","L5R R27A G152L",3
"lib1","SARS-CoV-2","ATTAATACATACCATT",1,1.26,NA,NA,NA,NA,NA,NA,"stop","E10* R78I",2
"lib1","SARS-CoV-2","ATTAATACGAATACGT",1,8.84,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","D59Y A81I Y123Q P149S",4
"lib1","SARS-CoV-2","ATTAATACGACTCAAG",5,47.89,10.77,0.01,0.11,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATACTCAATGTA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","L122T G146L F156*",3
"lib1","SARS-CoV-2","ATTAATAGAAAACACT",1,20.05,6,-4.76,2,1.5,1.14,0.08,">1 nonsynonymous","T15D Y91H F156N R179S",4
"lib1","SARS-CoV-2","ATTAATAGCGGAGAAT",2,1.8,NA,NA,NA,NA,NA,NA,"stop","D90C N120* N157M",3
"lib1","SARS-CoV-2","ATTAATAGCGTGAAAG",8,36.48,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6S V115M R127H G155L",4
"lib1","SARS-CoV-2","ATTAATAGCTGAGCAA",9,5.24,NA,NA,NA,NA,NA,NA,"stop","N4C T46P P96S S200*",4
"lib1","SARS-CoV-2","ATTAATATAAGATTAG",1,18.43,10.67,-0.09,0.1,2.9,1.03,0.01,">1 nonsynonymous","A18S G83F",2
"lib1","SARS-CoV-2","ATTAATATAGCCTTCG",2,10.72,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N107G L122P P133K K199Q",4
"lib1","SARS-CoV-2","ATTAATATAGGCCCCT",2,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46F P96S",2
"lib1","SARS-CoV-2","ATTAATATAGTAAAAG",2,8.52,6.05,-4.71,0.87,3,1.16,0.01,">1 nonsynonymous","G86Y D97A C158S",3
"lib1","SARS-CoV-2","ATTAATATATAACAGC",3,38.19,6,-4.76,1.92,1.5,1.29,0.04,">1 nonsynonymous","G9R F44A Q84L L162Y V173L T201M",6
"lib1","SARS-CoV-2","ATTAATATCACCTGTC",1,22.27,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35P P133T G146R",3
"lib1","SARS-CoV-2","ATTAATATCTTTTACA",6,62.4,10.83,0.06,0.04,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATATTACTAAAG",2,52.29,10.41,-0.35,0.06,2.84,1.03,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","ATTAATCAAACAGATT",8,90.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4C I28R S41I N64Y K94W",5
"lib1","SARS-CoV-2","ATTAATCACAGCAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3K S19* F99L N107R V115L K198R",6
"lib1","SARS-CoV-2","ATTAATCACTAAACAA",1,15.77,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24S D97S V103E L122M L131K Q168E",6
"lib1","SARS-CoV-2","ATTAATCACTTGACTT",7,42.71,6,-4.76,2,1.5,1.39,0.03,">1 nonsynonymous","N13R N64S G83N N92F",4
"lib1","SARS-CoV-2","ATTAATCAGATACACA",6,72,6.22,-4.54,0.74,1.5,1.18,0.02,">1 nonsynonymous","Y21K T100K Y121N",3
"lib1","SARS-CoV-2","ATTAATCATACCTACC",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T I88M L95W F156T",4
"lib1","SARS-CoV-2","ATTAATCATAGAACAA",5,93.94,8.08,-2.69,0.13,1.96,1.11,0.01,">1 nonsynonymous","T148S N157V",2
"lib1","SARS-CoV-2","ATTAATCATTCAGAAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","T15H C31* Y91T R124V",4
"lib1","SARS-CoV-2","ATTAATCCACACACTG",2,61.49,9.79,-0.97,0.1,2.43,1.03,0,">1 nonsynonymous","C6T E141I",2
"lib1","SARS-CoV-2","ATTAATCCCACATATC",2,6.2,9.18,-1.59,0.19,2.66,1.13,0.01,">1 nonsynonymous","C6S V77L D90S T100V",4
"lib1","SARS-CoV-2","ATTAATCCCAGCCTGA",6,11508.51,10.74,-0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATCCGTTGATCC",4,0.06,NA,NA,NA,NA,NA,NA,"stop","G9Y S29K Y35G V103Y E141*",5
"lib1","SARS-CoV-2","ATTAATCGATCCAAAA",3,23.94,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S41A N58L D90C P133L G146L",5
"lib1","SARS-CoV-2","ATTAATCGCCTGTTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R P54F D68Q F99S",4
"lib1","SARS-CoV-2","ATTAATCGTCAAACCG",2,108.07,8.59,-2.17,0.08,2.89,1.04,0,">1 nonsynonymous","S41G Y159L",2
"lib1","SARS-CoV-2","ATTAATCTAACCCCCA",9,51.14,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10L R16E L60H G101F G116R N120V E141P P149L",8
"lib1","SARS-CoV-2","ATTAATCTAAGCATAT",2,42.46,9.28,-1.48,0.1,2.76,1.2,0,"1 nonsynonymous","L125Y",1
"lib1","SARS-CoV-2","ATTAATCTACCCCATA",4,32.72,8.03,-2.73,0.2,1.59,1.12,0.01,">1 nonsynonymous","S45T N107P S113I",3
"lib1","SARS-CoV-2","ATTAATCTGAGAACCG",2,5.32,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","R25Q P82I",2
"lib1","SARS-CoV-2","ATTAATCTTAACGTGT",5,45.36,10.84,0.07,0.08,2.94,1,0,">1 nonsynonymous","E141Y K199G",2
"lib1","SARS-CoV-2","ATTAATCTTTATCCAC",5,91.48,10.5,-0.26,0.04,2.92,1.03,0,">1 nonsynonymous","I28V A190V",2
"lib1","SARS-CoV-2","ATTAATCTTTGGCGCT",1,46.34,10.07,-0.69,0.14,2.54,1.01,0,">1 nonsynonymous","A14G S45G",2
"lib1","SARS-CoV-2","ATTAATGAATAACAAT",6,1.5,NA,NA,NA,NA,NA,NA,"stop","E10S A105E Q176*",3
"lib1","SARS-CoV-2","ATTAATGAATTTCATA",5,30.21,10.76,0,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATGAGCCACAAT",2,21.14,10.22,-0.55,0.06,2.96,1.03,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","ATTAATGAGGTTGATA",6,15.61,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C6D V103R L131V",3
"lib1","SARS-CoV-2","ATTAATGATGAATCAA",1,6.15,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","G101C G172R",2
"lib1","SARS-CoV-2","ATTAATGATGCCATAA",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K W106A S200L",3
"lib1","SARS-CoV-2","ATTAATGCAACATAAA",2,23.93,10.65,-0.11,0.07,2.96,1.03,0,">1 nonsynonymous","T85K Q163R",2
"lib1","SARS-CoV-2","ATTAATGCTACACTAA",1,22.52,10.32,-0.44,0.06,2.97,1,0,">1 nonsynonymous","L5N V181I",2
"lib1","SARS-CoV-2","ATTAATGGCGATAGTT",5,12.69,6.14,-4.62,0.69,3,1.17,0.02,">1 nonsynonymous","V103S S139L",2
"lib1","SARS-CoV-2","ATTAATGGGATGAAAA",12,83.26,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","T15L L60E G86H Q168H",4
"lib1","SARS-CoV-2","ATTAATGGTTGGTCAT",1,9.43,6.26,-4.51,0.43,2.79,1.2,0.01,">1 nonsynonymous","T15G F62S D90Y S113G Y119R I142D",6
"lib1","SARS-CoV-2","ATTAATGTAACCAGAA",1,35.28,10.74,-0.03,0.07,2.94,1,0,"1 nonsynonymous","T46K",1
"lib1","SARS-CoV-2","ATTAATGTGCGACTCC",4,32.82,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A81R P96S N110S I142W Y159Q",5
"lib1","SARS-CoV-2","ATTAATTAAACTTTTG",3,48.3,10.18,-0.58,0.08,2.91,1,0,">1 nonsynonymous","G9S V37L F156S",3
"lib1","SARS-CoV-2","ATTAATTACAAACAGT",3,40.15,8.22,-2.55,0.29,1.5,1.06,0.03,">1 nonsynonymous","G155Q V181F",2
"lib1","SARS-CoV-2","ATTAATTACAGCTAAT",4,18.94,7.37,-3.39,0.36,1.5,1.26,0.03,">1 nonsynonymous","T3K A14Q D34L D112N P177T",5
"lib1","SARS-CoV-2","ATTAATTAGCCCACAG",2,41.67,10.72,-0.05,0.04,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATTAGTATGAAG",1,29.61,10.76,-0.01,0.06,2.81,1,0,">1 nonsynonymous","L60I I138A",2
"lib1","SARS-CoV-2","ATTAATTAGTGAATGT",2,65.24,10.7,-0.07,0.05,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATTATGTCCTAA",1,19.41,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10S V37M D90N W106M D112R G146Q F156A R179W",8
"lib1","SARS-CoV-2","ATTAATTCCAGGACTG",5,0.13,NA,NA,NA,NA,NA,NA,"stop","N1V A14N C31R P54L C61K Q79M C102* V115K Y165T",9
"lib1","SARS-CoV-2","ATTAATTCCATATCAA",3,38.62,10.89,0.12,0.08,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAATTCGAAAAATA",4,6.07,NA,NA,NA,NA,NA,NA,"stop","I28*",1
"lib1","SARS-CoV-2","ATTAATTGCAGTTTAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I G155I P161M S200F",4
"lib1","SARS-CoV-2","ATTAATTGCATCCGGC",1,19.59,6,-4.76,0.71,3,1.21,0.01,">1 nonsynonymous","G101C K128W G166I",3
"lib1","SARS-CoV-2","ATTAATTTAGGATTCT",5,47.57,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","S19L F44A N120C S129L",4
"lib1","SARS-CoV-2","ATTAATTTGTGTTAGG",8,95.71,9.12,-1.65,0.07,2.78,1.1,0,">1 nonsynonymous","G117R T140S",2
"lib1","SARS-CoV-2","ATTACAAAAAACAAGG",2,108.73,9.24,-1.53,0.09,2.59,1.14,0,">1 nonsynonymous","N4P L60T N118S",3
"lib1","SARS-CoV-2","ATTACAAAAGCGCTGA",3,356.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Q79A I104S Y175A A190T",4
"lib1","SARS-CoV-2","ATTACAAAAGTACCCG",9,96.81,8.45,-2.32,0.13,2.97,1,0.01,">1 nonsynonymous","L111M G117V T148D F156L",4
"lib1","SARS-CoV-2","ATTACAAACACTAAAA",4,44.04,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","Y66S P82H N107E G117H L122F T201C",6
"lib1","SARS-CoV-2","ATTACAAACATCAGAA",1,19.3,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","N58G N92Y D97L S129C",4
"lib1","SARS-CoV-2","ATTACAAATGCCTTAT",9,119.31,10.43,-0.34,0.05,2.73,1.03,0,">1 nonsynonymous","D98P N120F F160R",3
"lib1","SARS-CoV-2","ATTACAAATTGCGACA",3,49.62,9.81,-0.95,0.07,2.69,1.03,0,">1 nonsynonymous","Y21H S129P",2
"lib1","SARS-CoV-2","ATTACAACATTATTAA",6,29.02,7.08,-3.69,0.35,1.5,1.18,0.02,">1 nonsynonymous","A33S I88V Q176E",3
"lib1","SARS-CoV-2","ATTACAACGCTGCTTA",5,35.02,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","N58Y D97R P161C",3
"lib1","SARS-CoV-2","ATTACAACTAATCACT",1,4.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22R",1
"lib1","SARS-CoV-2","ATTACAACTGAAAAAA",5,85.02,10.25,-0.51,0.04,2.88,1.01,0,">1 nonsynonymous","E10Y I138V",2
"lib1","SARS-CoV-2","ATTACAAGACAAACCC",3,12.12,10.97,0.21,0.13,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACAAGTCATCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F62A V103* S147C",3
"lib1","SARS-CoV-2","ATTACAAGTTTAACGA",4,14.53,9.68,-1.09,0.32,1.65,1.13,0.06,">1 nonsynonymous","W23G V37G",2
"lib1","SARS-CoV-2","ATTACAATACAAGCAT",1,20.95,10.76,0,0.06,2.89,1.07,0,">1 nonsynonymous","V115Q S147N",2
"lib1","SARS-CoV-2","ATTACAATCCGGTAAG",6,112.8,8.51,-2.26,0.16,1.61,1.19,0.01,">1 nonsynonymous","D90I F160A P169R K199L",4
"lib1","SARS-CoV-2","ATTACAATCTTAGCGT",4,21.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22T E76R N157G",3
"lib1","SARS-CoV-2","ATTACAATGAATAGTG",2,57.12,9.94,-0.83,0.14,2.28,1.04,0.01,"1 nonsynonymous","V11P",1
"lib1","SARS-CoV-2","ATTACAATGATGATGC",1,11.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1L K48R Y93L",3
"lib1","SARS-CoV-2","ATTACAATTGACTAGG",6,5.99,NA,NA,NA,NA,NA,NA,"stop","E10* T100L",2
"lib1","SARS-CoV-2","ATTACAATTGTTATAT",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T G116C L122M",3
"lib1","SARS-CoV-2","ATTACACACAATTAAG",3,23.12,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A33P P82T G86R",3
"lib1","SARS-CoV-2","ATTACACACACGAGAG",7,44.72,10.84,0.07,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACACACATTAATA",6,63.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T63F D112K P161G T201L",4
"lib1","SARS-CoV-2","ATTACACACCACTCCT",1,33.65,10.52,-0.24,0.06,2.96,1,0,">1 nonsynonymous","L5M N30K C61D",3
"lib1","SARS-CoV-2","ATTACACACCATATAC",1,30.46,10.76,0,0.09,2.87,1.08,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","ATTACACATGAACGAT",3,108.33,9.36,-1.41,0.06,2.89,1.09,0,">1 nonsynonymous","L60Y F126Y",2
"lib1","SARS-CoV-2","ATTACACATTTTGCCA",3,33.8,8.72,-2.05,0.11,2.96,1.07,0,">1 nonsynonymous","S43T T63A Y121F T170S G174Y",5
"lib1","SARS-CoV-2","ATTACACCATATATCG",5,25.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88K Y93R K128Y",3
"lib1","SARS-CoV-2","ATTACACCCAAACATA",6,118.04,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K26G S41P N120S G174I",4
"lib1","SARS-CoV-2","ATTACACCCAAGGGTC",2,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L T100F",2
"lib1","SARS-CoV-2","ATTACACCGGATTCAA",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L T15N P96M Y143A",4
"lib1","SARS-CoV-2","ATTACACCGTATGAAA",8,120.99,10.15,-0.62,0.08,2.68,1.03,0,">1 nonsynonymous","E10V S43T D90L",3
"lib1","SARS-CoV-2","ATTACACCTGACCTTG",5,0.77,NA,NA,NA,NA,NA,NA,"stop","T63N G116* Q163V T201L",4
"lib1","SARS-CoV-2","ATTACACGAATAAGAC",3,48.53,10.78,0.02,0.05,2.9,1.03,0,"1 nonsynonymous","R27E",1
"lib1","SARS-CoV-2","ATTACACGGGTTCGCA",3,61.23,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A105S F167A",2
"lib1","SARS-CoV-2","ATTACACTAAAGAAAG",1,22.67,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","A22E F44Y D68L P82S",4
"lib1","SARS-CoV-2","ATTACACTGTTTCTCC",4,0.43,NA,NA,NA,NA,NA,NA,"stop","T55* G101* D137K",3
"lib1","SARS-CoV-2","ATTACACTTCGAAGAA",5,76.47,10.14,-0.62,0.04,2.91,1.02,0,">1 nonsynonymous","Q79C K87T",2
"lib1","SARS-CoV-2","ATTACAGATGATTGGT",8,188.74,10.64,-0.12,0.03,2.92,1.01,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","ATTACAGGAATAAGAT",2,36.28,6,-4.76,1.28,1.5,1.15,0.02,">1 nonsynonymous","T63F N107A G146K S164H",4
"lib1","SARS-CoV-2","ATTACAGGACGTGACA",10,88.01,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","C6R G86L V173M",3
"lib1","SARS-CoV-2","ATTACAGGGACGATAT",5,44.05,8.52,-2.24,0.2,1.87,1.15,0.02,">1 nonsynonymous","E10Y Y165H",2
"lib1","SARS-CoV-2","ATTACAGGGTAATGAA",2,11.36,7.32,-3.45,0.46,1.5,1,0.04,">1 nonsynonymous","P96W Y165P",2
"lib1","SARS-CoV-2","ATTACAGGTAAAAACC",3,20.52,9.19,-1.57,0.31,1.5,1,0.04,">1 nonsynonymous","T15Y D34C T100Y K128N T201L",5
"lib1","SARS-CoV-2","ATTACAGGTTTACACG",2,49.66,10.78,0.02,0.07,2.98,1,0,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","ATTACAGTGGACCCTT",1,9.63,7.99,-2.77,0.45,1.5,1,0.08,">1 nonsynonymous","A18V Y91K T100A F156I",4
"lib1","SARS-CoV-2","ATTACAGTTATCGAGA",4,24.68,10.44,-0.33,0.06,2.88,1.02,0,">1 nonsynonymous","S41P K128A",2
"lib1","SARS-CoV-2","ATTACATAAAACAGAA",3,19.21,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G101V A105Y Q144V N157Y F185S",5
"lib1","SARS-CoV-2","ATTACATAATGTAATA",1,77.98,10.61,-0.16,0.05,2.88,1.07,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","ATTACATACTCCTACG",5,89.63,10.7,-0.06,0.05,2.94,1.02,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","ATTACATATAACACCG",2,0.5,NA,NA,NA,NA,NA,NA,"stop","E10C Q84* N107S S129Q",4
"lib1","SARS-CoV-2","ATTACATATGACGGCA",1,46.82,9.58,-1.19,0.07,2.85,1.06,0,">1 nonsynonymous","V65L Y143I",2
"lib1","SARS-CoV-2","ATTACATCGAACATTT",2,21.1,9.39,-1.37,0.18,1.58,1.14,0.01,">1 nonsynonymous","T55Y L131S T201Y",3
"lib1","SARS-CoV-2","ATTACATGCTATCATA",5,141.61,8.66,-2.1,0.1,2.33,1.11,0,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","ATTACATGTGAACCCA",2,46.39,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31S T100M Y121P",3
"lib1","SARS-CoV-2","ATTACATTAACTCGTT",1,8.28,10.68,-0.09,0.08,2.95,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACATTAGAATATC",2,59.13,10.57,-0.2,0.05,2.94,1,0,">1 nonsynonymous","N130C I138R",2
"lib1","SARS-CoV-2","ATTACATTCACAAATA",1,44.76,10.67,-0.1,0.05,2.86,1.1,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","ATTACATTGGGGTCAG",6,110.62,10.71,-0.06,0.04,2.9,1.06,0,"1 nonsynonymous","Y121F",1
"lib1","SARS-CoV-2","ATTACATTGGTATGGA",2,68.83,10.77,0.01,0.05,2.83,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACCAAAAAAGGAT",8,195.37,10.75,-0.02,0.06,2.9,1.05,0,">1 nonsynonymous","T15S F44W",2
"lib1","SARS-CoV-2","ATTACCAAAAGGGCCC",2,60.71,9.83,-0.94,0.1,2.72,1.06,0,">1 nonsynonymous","N4Q S41A L60F N151T Y175F",5
"lib1","SARS-CoV-2","ATTACCAAACGCTGAC",1,41.54,10.7,-0.07,0.08,2.93,1.04,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","ATTACCAACAAACCGA",6,64.44,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P82A K87Y F126S T201M",4
"lib1","SARS-CoV-2","ATTACCAACCCTATTA",1,23.92,10.89,0.12,0.1,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACCAACGGTAACG",2,1.46,NA,NA,NA,NA,NA,NA,"stop","R25L G86* N107H R124P F167L Y175S",6
"lib1","SARS-CoV-2","ATTACCAAGAAGGCCT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35* S45F K56V L122K R136S V181S",6
"lib1","SARS-CoV-2","ATTACCAAGGATAGGT",10,33.9,6.02,-4.75,1.35,1.5,1.18,0.04,">1 nonsynonymous","Y93G K132S A192R K199Y",4
"lib1","SARS-CoV-2","ATTACCACAAGTTACA",7,40.98,10.26,-0.51,0.05,2.82,1.01,0,"1 nonsynonymous","Y165F",1
"lib1","SARS-CoV-2","ATTACCACAATTCTGC",3,10.55,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","T100M S108F L125N R136F",4
"lib1","SARS-CoV-2","ATTACCAGAGTAGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V11W D98* R124W T140Y P197R",5
"lib1","SARS-CoV-2","ATTACCAGTTCAATCT",4,29.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T148D F167S",2
"lib1","SARS-CoV-2","ATTACCATCAACTTCT",2,19.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5V L95E F160Y",3
"lib1","SARS-CoV-2","ATTACCATCCCAATGG",2,19.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S36L T55I F99G Y175T",4
"lib1","SARS-CoV-2","ATTACCATGCCTTAAG",5,90.03,10.87,0.11,0.06,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTACCCAACTTAATA",7,2.08,NA,NA,NA,NA,NA,NA,"stop","Y50K K56* E186T",3
"lib1","SARS-CoV-2","ATTACCCACGTGTTAA",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T Y93K",2
"lib1","SARS-CoV-2","ATTACCCACGTTCACC",7,71.74,8.47,-2.29,0.15,2.23,1.12,0.01,">1 nonsynonymous","A81R G116V G155D",3
"lib1","SARS-CoV-2","ATTACCCAGATCGAAT",4,142.03,10.72,-0.04,0.08,2.92,1.07,0,"1 nonsynonymous","N4S",1
"lib1","SARS-CoV-2","ATTACCCAGGTTGTGA",2,22.87,6,-4.76,1.2,1.5,1.16,0.01,">1 nonsynonymous","F99S Y121V",2
"lib1","SARS-CoV-2","ATTACCCCCAGACGCT",4,15.19,7.24,-3.52,0.25,2.05,1.16,0.01,">1 nonsynonymous","C61V F99V E141V F156M",4
"lib1","SARS-CoV-2","ATTACCCCCTTCCCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84Y N171L",2
"lib1","SARS-CoV-2","ATTACCCCTAAATTAC",2,16.01,10.77,0,0.07,2.96,1,0,"1 nonsynonymous","N64A",1
"lib1","SARS-CoV-2","ATTACCCGACGCATAA",3,22.08,6,-4.76,2,3,1.08,0,">1 nonsynonymous","S113N P161Y",2
"lib1","SARS-CoV-2","ATTACCCTATGTGAAC",1,57.97,10,-0.76,0.08,2.69,1.04,0,">1 nonsynonymous","N4D D34Y",2
"lib1","SARS-CoV-2","ATTACCGAAATTATTA",8,48.05,6.17,-4.59,0.76,1.5,1.23,0.02,">1 nonsynonymous","D90V S113T N151M",3
"lib1","SARS-CoV-2","ATTACCGAGAAGCCAC",3,7.8,6.3,-4.46,0.39,1.91,1.08,0.01,">1 nonsynonymous","N1V R179I",2
"lib1","SARS-CoV-2","ATTACCGATGTATCAT",1,8.31,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A42G D68K",2
"lib1","SARS-CoV-2","ATTACCGGTGTGAAGT",4,10.4,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S69K R127A I142E",3
"lib1","SARS-CoV-2","ATTACCTAAAACGCTG",1,56.61,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V52S L131H",2
"lib1","SARS-CoV-2","ATTACCTAACCAGTTG",1,71.64,10.21,-0.55,0.06,2.93,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","ATTACCTAGATAAACT",7,115.54,10.31,-0.46,0.04,2.83,1.04,0,">1 nonsynonymous","G83A D98T S129N",3
"lib1","SARS-CoV-2","ATTACCTAGTCACCCG",3,111.26,7.95,-2.81,0.13,2.11,1.13,0.01,">1 nonsynonymous","F62K Y175S E186P",3
"lib1","SARS-CoV-2","ATTACCTCAAAGAAAC",2,12.41,9.93,-0.84,0.25,2.6,1.1,0.03,"wildtype","",0
"lib1","SARS-CoV-2","ATTACCTCAGCTCAAA",2,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T D90C T100S",3
"lib1","SARS-CoV-2","ATTACCTCGATAAACT",2,23.83,10.58,-0.18,0.08,2.99,1,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","ATTACCTGAAATTATG",3,10.34,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F99L G116Q R136S",3
"lib1","SARS-CoV-2","ATTACCTGTCGAAAAT",4,40.24,10.11,-0.65,0.13,2.34,1,0.01,"1 nonsynonymous","R25Q",1
"lib1","SARS-CoV-2","ATTACCTTAAACGAAA",2,18.28,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64A D98I V103H F134E",4
"lib1","SARS-CoV-2","ATTACCTTGATAGGAA",10,132.65,10.13,-0.64,0.04,2.87,1.02,0,"1 nonsynonymous","I142W",1
"lib1","SARS-CoV-2","ATTACCTTGTTAAACG",1,7.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","E10M T85L S139F P169I",4
"lib1","SARS-CoV-2","ATTACCTTTGACACAA",1,15.23,8.23,-2.53,0.26,1.5,1.16,0.03,">1 nonsynonymous","S45R G51C",2
"lib1","SARS-CoV-2","ATTACGAAAAAAGAAA",1,26.17,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","E10P Y50E L95S G152H",4
"lib1","SARS-CoV-2","ATTACGACGAGGGAAT",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T C49L T55F G101F",4
"lib1","SARS-CoV-2","ATTACGACTTCATATA",3,18.42,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A22N G51L L95Y G101Y V173K",5
"lib1","SARS-CoV-2","ATTACGAGGTATAAAC",4,5.67,9.89,-0.87,0.21,2.26,1.04,0.02,">1 nonsynonymous","N13K K94N",2
"lib1","SARS-CoV-2","ATTACGATATATACTT",3,35.38,10.77,0,0.07,2.92,1.03,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","ATTACGATGGAAATCC",3,88.04,10.04,-0.72,0.05,2.77,1.07,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","ATTACGCACTAATTAT",1,23.74,10.89,0.12,0.07,2.8,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACGCATAGACCAT",2,81.22,8.35,-2.41,0.13,2.83,1.06,0.01,">1 nonsynonymous","S41R L125G N157A",3
"lib1","SARS-CoV-2","ATTACGCCAAAATGGG",2,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L S53G G86S F167I K198E",5
"lib1","SARS-CoV-2","ATTACGCCAGTACCAT",16,154.05,8.49,-2.27,0.15,1.9,1.12,0.01,">1 nonsynonymous","W106S Y119T L187K",3
"lib1","SARS-CoV-2","ATTACGCGAAACCTCC",5,60.36,10.57,-0.19,0.08,2.85,1.11,0,"1 nonsynonymous","N4S",1
"lib1","SARS-CoV-2","ATTACGCTGATGAAAC",3,11.13,9.95,-0.81,0.23,2.3,1.06,0.03,"1 nonsynonymous","G51F",1
"lib1","SARS-CoV-2","ATTACGCTGTTAACAC",10,114.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L V37Q D59K Q163H",4
"lib1","SARS-CoV-2","ATTACGCTTTCTTCTA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","A42* D68R D90W A145F G172A",5
"lib1","SARS-CoV-2","ATTACGGACCAAAATA",6,50.05,6,-4.76,1.22,1.5,1.19,0.02,">1 nonsynonymous","T140P Y165A",2
"lib1","SARS-CoV-2","ATTACGGATATAAGTG",9,95.12,10.23,-0.53,0.03,2.88,1.01,0,">1 nonsynonymous","F44A K114S A190P T201V",4
"lib1","SARS-CoV-2","ATTACGGCAAGTAGAT",2,2388.86,10.24,-0.52,0.04,2.92,1,0,">1 nonsynonymous","L5I E76M",2
"lib1","SARS-CoV-2","ATTACGGCCAAAACTG",3,28.81,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C61T G74W F134T V173L",4
"lib1","SARS-CoV-2","ATTACGGCGGATTATG",1,10.39,9.46,-1.3,0.17,1.72,1.08,0.01,">1 nonsynonymous","T63Q L95T",2
"lib1","SARS-CoV-2","ATTACGGGGGGTACAG",1,37.75,9.53,-1.24,0.1,2.14,1.09,0,">1 nonsynonymous","Q84N Y121I T201N",3
"lib1","SARS-CoV-2","ATTACGTCCACAAGAC",17,268.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N24L N92D K132S N157Y",4
"lib1","SARS-CoV-2","ATTACGTCTATATCAT",5,50.53,10.82,0.05,0.08,2.97,1,0,">1 nonsynonymous","K128H S200Q",2
"lib1","SARS-CoV-2","ATTACGTCTATTGACA",2,43.5,10.74,-0.03,0.08,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACGTCTCCTCATT",4,28.7,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F99S P149K L188R T201S",4
"lib1","SARS-CoV-2","ATTACGTGACGTAAAG",11,95.34,6.39,-4.37,0.45,1.5,1.23,0.02,">1 nonsynonymous","R16K Y35S Y93V P149Y",4
"lib1","SARS-CoV-2","ATTACGTGCACAACTA",2,84.23,10.45,-0.32,0.05,2.93,1.03,0,">1 nonsynonymous","F44S T201Y",2
"lib1","SARS-CoV-2","ATTACGTTGACTTATC",4,128.49,10.72,-0.05,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTACGTTTATTGATC",16,4.46,NA,NA,NA,NA,NA,NA,"stop","N4F S36N C49G D59K K128*",5
"lib1","SARS-CoV-2","ATTACTAAAAACTTAA",1,5.81,7.71,-3.05,0.63,1.5,1.05,0.08,"1 nonsynonymous","A22P",1
"lib1","SARS-CoV-2","ATTACTAAAAGAAGCT",4,122.27,10.78,0.01,0.05,2.94,1.03,0,">1 nonsynonymous","T55I T148S",2
"lib1","SARS-CoV-2","ATTACTAAATACAAAC",8,106.86,6.48,-4.28,0.38,1.5,1.12,0.01,">1 nonsynonymous","F8P F70T K87D",3
"lib1","SARS-CoV-2","ATTACTAACGAAACAA",2,2.6,NA,NA,NA,NA,NA,NA,"stop","L5Q V37C C49G L122M L131S T201*",6
"lib1","SARS-CoV-2","ATTACTAAGTCTTTTT",1,10.6,6,-4.76,0.76,2.48,1.08,0,">1 nonsynonymous","V71M C150Y",2
"lib1","SARS-CoV-2","ATTACTAATTGTGATT",1,30.23,8.78,-1.98,0.13,1.71,1.14,0.01,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","ATTACTAGAAACGACA",5,38.84,6,-4.76,1.15,1.5,1.13,0.01,">1 nonsynonymous","F44L L57E T63D Y143K T148Y",5
"lib1","SARS-CoV-2","ATTACTAGACCTCCAA",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P G86L T100N N120V G152V K198T",6
"lib1","SARS-CoV-2","ATTACTAGATTATGCT",1,41.95,10.17,-0.6,0.06,2.87,1.07,0,">1 nonsynonymous","Y39T K87G N120A P133A A190G",5
"lib1","SARS-CoV-2","ATTACTATACGTTTTT",8,122.13,10.51,-0.25,0.09,2.76,1.01,0,">1 nonsynonymous","E10S T55N K128V",3
"lib1","SARS-CoV-2","ATTACTATGTTCCTCG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T N107T S129P V153D",4
"lib1","SARS-CoV-2","ATTACTATTAAGTGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37K",2
"lib1","SARS-CoV-2","ATTACTATTATTTGAG",1,23.56,10.46,-0.3,0.08,2.78,1.11,0,">1 nonsynonymous","N4K F62S N130G T201Y",4
"lib1","SARS-CoV-2","ATTACTCAAGCTAACA",2,60.19,9.83,-0.94,0.16,1.82,1.1,0.01,">1 nonsynonymous","V11L T100Y P133L",3
"lib1","SARS-CoV-2","ATTACTCACATACTGC",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I A81L",2
"lib1","SARS-CoV-2","ATTACTCACTAAGTCA",4,29.46,10.63,-0.13,0.08,2.9,1,0,">1 nonsynonymous","N4Y D59Y Q84S",3
"lib1","SARS-CoV-2","ATTACTCAGATCATCC",4,1.17,NA,NA,NA,NA,NA,NA,"stop","L38M A89* G155V",3
"lib1","SARS-CoV-2","ATTACTCCATTTAAGT",6,56.72,6,-4.76,1.71,1.5,1.2,0.01,">1 nonsynonymous","C6M C31P F44K T140S P161C",5
"lib1","SARS-CoV-2","ATTACTCCTAGTAGAA",6,164.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G116M G146P G152K",3
"lib1","SARS-CoV-2","ATTACTCCTGCATTTG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C N13F A42K F47V I80V",5
"lib1","SARS-CoV-2","ATTACTCGGTCAACGG",4,46.93,8.51,-2.25,0.19,2.47,1.09,0.01,">1 nonsynonymous","P96T Y119G",2
"lib1","SARS-CoV-2","ATTACTCGTTGTGAAA",3,17.28,6,-4.76,1.51,1.5,1.17,0.01,">1 nonsynonymous","F8N D97M N107M",3
"lib1","SARS-CoV-2","ATTACTCTCCAAATAC",5,1.36,NA,NA,NA,NA,NA,NA,"stop","N4R G9* S36P S41P I142S",5
"lib1","SARS-CoV-2","ATTACTCTGGCGATAT",10,130.81,9.31,-1.45,0.1,1.97,1.09,0,">1 nonsynonymous","G9P F44V N109W",3
"lib1","SARS-CoV-2","ATTACTCTTGTAAACT",5,81.14,10.34,-0.43,0.07,2.69,1.05,0,">1 nonsynonymous","G83D L122M E141V",3
"lib1","SARS-CoV-2","ATTACTGAATTCAATA",2,27.37,7.36,-3.41,0.19,1.5,1.08,0.01,">1 nonsynonymous","N118L R136T",2
"lib1","SARS-CoV-2","ATTACTGCGGCTTGAA",6,0,NA,NA,NA,NA,NA,NA,"stop","S43* T201N",2
"lib1","SARS-CoV-2","ATTACTGGAGGAGTAA",3,78.47,9.26,-1.51,0.09,2.81,1.11,0,"1 nonsynonymous","G174I",1
"lib1","SARS-CoV-2","ATTACTGTGTTATAAA",1,38.88,7.33,-3.43,0.14,1.9,1.18,0.01,">1 nonsynonymous","S113E Y119N",2
"lib1","SARS-CoV-2","ATTACTGTTATTTTAA",4,51.78,10.57,-0.2,0.08,2.91,1.05,0,">1 nonsynonymous","L5N T15S G116S",3
"lib1","SARS-CoV-2","ATTACTTAAATACTAG",2,20.53,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T3Y C61W S108Y N157F",4
"lib1","SARS-CoV-2","ATTACTTACAAATCAA",2,6.08,8.58,-2.18,0.41,1.5,1.31,0.04,">1 nonsynonymous","V153N L183T K199A",3
"lib1","SARS-CoV-2","ATTACTTACAACAAAA",2,76.85,7.34,-3.42,0.16,1.82,1.1,0.01,"1 nonsynonymous","Y175T",1
"lib1","SARS-CoV-2","ATTACTTACTCGTTTC",6,50.65,6,-4.76,1.69,1.5,1.21,0.03,">1 nonsynonymous","N13F F167I P197Y",3
"lib1","SARS-CoV-2","ATTACTTAGAGACAAC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","L5E G83*",2
"lib1","SARS-CoV-2","ATTACTTCATGAGACA",1,68.05,10.93,0.16,0.08,2.85,1.09,0,">1 nonsynonymous","Y123F K199S",2
"lib1","SARS-CoV-2","ATTACTTCCGAGGGAA",8,127.57,9.57,-1.19,0.1,2.36,1.08,0,">1 nonsynonymous","T3G A14Q N107K",3
"lib1","SARS-CoV-2","ATTACTTGAAACGAGC",1,98.24,10.35,-0.41,0.05,2.85,1.03,0,">1 nonsynonymous","S41P K56L T100F",3
"lib1","SARS-CoV-2","ATTACTTGTGAATCCC",5,35.11,6.23,-4.53,0.93,1.5,1.14,0.05,"1 nonsynonymous","D68G",1
"lib1","SARS-CoV-2","ATTACTTTGATAAATC",13,94.28,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","R78S A105K N157V",3
"lib1","SARS-CoV-2","ATTAGAAAAGCACCTT",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L R136A F156M",3
"lib1","SARS-CoV-2","ATTAGAAACTCTAACA",11,56.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y123Q G155T C158D A190C",4
"lib1","SARS-CoV-2","ATTAGAAAGAAGCCTT",5,59,10.33,-0.43,0.06,2.95,1,0,">1 nonsynonymous","V37N T55I L60T",3
"lib1","SARS-CoV-2","ATTAGAAAGCTCTAAA",1,5.57,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","D59L R127S V180M",3
"lib1","SARS-CoV-2","ATTAGAAAGTCCTTGA",1,17.19,10.55,-0.21,0.07,2.96,1,0,"1 nonsynonymous","G174D",1
"lib1","SARS-CoV-2","ATTAGAAATATAGTAG",6,101.19,8.97,-1.8,0.15,1.92,1.15,0.01,">1 nonsynonymous","P7L R27P V52I C61T D97E E154V",6
"lib1","SARS-CoV-2","ATTAGAACAAAAAACA",3,16.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34S R127I P169G T201K",4
"lib1","SARS-CoV-2","ATTAGAACACAACAAC",4,139.93,6,-4.76,2,3,1.21,0,">1 nonsynonymous","Y121V P177C",2
"lib1","SARS-CoV-2","ATTAGAACATTTATTA",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S T55V A89L",3
"lib1","SARS-CoV-2","ATTAGAACGGGCACAA",3,30.75,10.14,-0.62,0.1,2.59,1.22,0,"1 nonsynonymous","F134K",1
"lib1","SARS-CoV-2","ATTAGAACTTTGAGTG",5,0.22,NA,NA,NA,NA,NA,NA,"stop","S43D C49D K87G V153*",4
"lib1","SARS-CoV-2","ATTAGAAGATCCTTTT",3,11.82,NA,NA,NA,NA,NA,NA,"stop","T15G P82*",2
"lib1","SARS-CoV-2","ATTAGAAGATTCCGAC",5,110.7,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y39Q L57V W106K Q176R S184I",5
"lib1","SARS-CoV-2","ATTAGAAGTATGTGTC",9,184.83,10.79,0.03,0.06,2.92,1.05,0,"1 nonsynonymous","T201G",1
"lib1","SARS-CoV-2","ATTAGAATAATATTCT",6,16.75,8.29,-2.48,0.31,1.5,1.08,0.03,">1 nonsynonymous","F8M T15L E135L",3
"lib1","SARS-CoV-2","ATTAGAATCAGGAAAC",5,29.38,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y50T V103D R124L",3
"lib1","SARS-CoV-2","ATTAGAATCGCGATGT",4,106.33,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y39S S45N L60W K87E Y123L",5
"lib1","SARS-CoV-2","ATTAGAATTATGCCAT",5,50.4,9.03,-1.73,0.21,1.5,1.14,0.02,">1 nonsynonymous","S147P V180F",2
"lib1","SARS-CoV-2","ATTAGACAAATTATCA",1,7.63,9.97,-0.8,0.38,2.43,1.09,0.01,">1 nonsynonymous","L57C S129G",2
"lib1","SARS-CoV-2","ATTAGACAATAGTGGT",2,9.72,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3P P149L T170W P177Q",4
"lib1","SARS-CoV-2","ATTAGACACGTTTAAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","C49* L95T G155L Y175V",4
"lib1","SARS-CoV-2","ATTAGACCGCTCTACC",5,62.55,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N4R S113L Y119M F156S",4
"lib1","SARS-CoV-2","ATTAGACCTTGTTCAA",3,159.63,10.64,-0.13,0.04,2.92,1.05,0,">1 nonsynonymous","V52C T201L",2
"lib1","SARS-CoV-2","ATTAGACGGTTGGCCG",2,55.81,8.24,-2.52,0.16,2.34,1.08,0.01,">1 nonsynonymous","S41H S113F G196S",3
"lib1","SARS-CoV-2","ATTAGACTGAGGCCCA",6,69.46,8.6,-2.17,0.11,2.62,1.09,0.01,">1 nonsynonymous","F62K N120P",2
"lib1","SARS-CoV-2","ATTAGACTGATCTAAG",1,17.19,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A18V N40K C61W D68R R136P",5
"lib1","SARS-CoV-2","ATTAGACTGGAAAAAT",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N K94N N107F",3
"lib1","SARS-CoV-2","ATTAGAGACAAACATT",1,26.68,10.29,-0.48,0.1,1.91,1,0,">1 nonsynonymous","D90Y D97V S129V K198L",4
"lib1","SARS-CoV-2","ATTAGAGACGCCTCAT",1,7.65,NA,NA,NA,NA,NA,0.27,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","ATTAGAGAGCCGTAAT",3,49.17,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F8P R127T",2
"lib1","SARS-CoV-2","ATTAGAGCAAACGGTA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","V37C R73W D90V W106R Y159*",5
"lib1","SARS-CoV-2","ATTAGAGCCTGATTGA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S P149K",2
"lib1","SARS-CoV-2","ATTAGAGCTCACTTTA",1,13.34,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","C6M N24H G116R P161S",4
"lib1","SARS-CoV-2","ATTAGAGGCATGAAAC",6,74.59,8.28,-2.49,0.38,1.5,1.03,0.05,">1 nonsynonymous","F17R G83Q P191S",3
"lib1","SARS-CoV-2","ATTAGAGGGCCCAAGA",4,48.53,10.67,-0.09,0.05,2.91,1.05,0,"1 nonsynonymous","K132N",1
"lib1","SARS-CoV-2","ATTAGAGGTTTCATTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A G101Q",2
"lib1","SARS-CoV-2","ATTAGAGTCCAAAAAG",3,9.1,6.09,-4.67,0.63,3,1.15,0.01,">1 nonsynonymous","T3D P169C G174T E186F",4
"lib1","SARS-CoV-2","ATTAGATAAAACCTAT",7,48.69,6.06,-4.7,0.89,1.5,1.19,0.02,">1 nonsynonymous","T63A L95W Y165Q",3
"lib1","SARS-CoV-2","ATTAGATAAATAATAA",1,5.67,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","ATTAGATACACAAGAC",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E L122C E135S Y143K K198H",5
"lib1","SARS-CoV-2","ATTAGATACTGAACAG",1,25.67,9.02,-1.74,0.07,2.82,1.12,0,">1 nonsynonymous","F134G E141I Q168I",3
"lib1","SARS-CoV-2","ATTAGATATGCATAGT",3,16.62,9.78,-0.98,0.31,1.54,1.18,0.04,">1 nonsynonymous","T15V V37H P96H V153K",4
"lib1","SARS-CoV-2","ATTAGATGCTTCAATA",11,30.33,6,-4.76,1.22,3,1.17,0.01,"1 nonsynonymous","F99E",1
"lib1","SARS-CoV-2","ATTAGATTCGATAGCT",6,40.9,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V65C I72Y N92I",3
"lib1","SARS-CoV-2","ATTAGATTGTAAAACA",1,29.31,8.74,-2.02,0.17,1.84,1.09,0.01,">1 nonsynonymous","C6Y C61N D90V",3
"lib1","SARS-CoV-2","ATTAGCAAATATAGGA",6,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I F44H K94M Y143G",4
"lib1","SARS-CoV-2","ATTAGCACACAATTGT",10,211.14,9.79,-0.97,0.08,1.95,1.09,0,">1 nonsynonymous","F99I N130M V173L",3
"lib1","SARS-CoV-2","ATTAGCACTATAATAA",1,14.39,8.54,-2.23,0.16,2.81,1.14,0.01,"1 nonsynonymous","G166D",1
"lib1","SARS-CoV-2","ATTAGCAGAAGATCAG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","L5K F44* D75L C102T",4
"lib1","SARS-CoV-2","ATTAGCAGAGGAATAG",7,108.5,10.76,-0.01,0.05,2.9,1.07,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","ATTAGCATAAAACTAT",5,44,10.83,0.07,0.08,2.9,1.07,0,">1 nonsynonymous","P54L D97N",2
"lib1","SARS-CoV-2","ATTAGCATAATTCAAT",7,24.59,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G83T Y91N D98H C102Y I142S",5
"lib1","SARS-CoV-2","ATTAGCCAATATACAT",2,95.52,9.92,-0.85,0.07,2.64,1.06,0,">1 nonsynonymous","D34P Y35C A42G",3
"lib1","SARS-CoV-2","ATTAGCCAGGAAGAAA",2,16.04,6.88,-3.88,0.43,1.5,1.07,0.05,">1 nonsynonymous","S43A L95M S113M Y119T",4
"lib1","SARS-CoV-2","ATTAGCCCATAATCCT",2,55.11,10.69,-0.08,0.07,2.89,1.05,0,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","ATTAGCCGAAACCTTC",11,136.67,6.86,-3.91,0.2,1.5,1.14,0.01,">1 nonsynonymous","C6P V37G S45D N64F E141R F160P",6
"lib1","SARS-CoV-2","ATTAGCCGGACCGCTT",1,5.02,10.38,-0.38,0.44,1.85,1.18,0.06,"1 nonsynonymous","Y50T",1
"lib1","SARS-CoV-2","ATTAGCCTTAACCCAT",9,64.55,9.96,-0.81,0.09,2.68,1.03,0,">1 nonsynonymous","N58C N64I N120M",3
"lib1","SARS-CoV-2","ATTAGCGATCCGCTAC",7,90.5,9.84,-0.93,0.04,2.8,1.07,0,">1 nonsynonymous","V37W G74R T201S",3
"lib1","SARS-CoV-2","ATTAGCGCGCGCTCTA",4,23.57,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","A14R C49T D112K",3
"lib1","SARS-CoV-2","ATTAGCGGAAGTGAGG",1,10.32,10.61,-0.15,0.03,2.91,1.06,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","ATTAGCGGTGACCCAA",3,137.54,10.68,-0.09,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAGCTACGAGGTCT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","T3K K87P N92* D98V Y119T V153S",6
"lib1","SARS-CoV-2","ATTAGCTCAAAAAAGT",3,52.36,10.71,-0.05,0.04,2.88,1.05,0,">1 nonsynonymous","I28M D59L T63S",3
"lib1","SARS-CoV-2","ATTAGCTCCCCGAGTG",1,15.72,10.64,-0.13,0.06,2.98,1,0,"1 nonsynonymous","K114V",1
"lib1","SARS-CoV-2","ATTAGCTCTTACCCGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29L T201L",2
"lib1","SARS-CoV-2","ATTAGCTGTATAACGC",3,88.58,10.67,-0.1,0.08,2.8,1.04,0,">1 nonsynonymous","T3Y T46L",2
"lib1","SARS-CoV-2","ATTAGCTTAAACCAGT",2,41.66,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","P7W D59V I88R C102V L125Q",5
"lib1","SARS-CoV-2","ATTAGCTTCATCCAAC",2,49.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31V R136D F167M",3
"lib1","SARS-CoV-2","ATTAGGAAATAAAACT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","I2L K48* A105S F126L Y165N",5
"lib1","SARS-CoV-2","ATTAGGAATTTCTAAA",3,66.18,10.77,0.01,0.07,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTAGGAATTTGTAAT",4,145.96,10.15,-0.61,0.06,2.71,1.05,0,">1 nonsynonymous","N1P Y178I",2
"lib1","SARS-CoV-2","ATTAGGACTGCGTGCA",1,13.05,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F99N S139K N151S",3
"lib1","SARS-CoV-2","ATTAGGAGAATTTCTT",3,63.35,9.77,-1,0.02,2.94,1.01,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","ATTAGGATATAAGAAC",9,63.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L38Q I88C F99K",3
"lib1","SARS-CoV-2","ATTAGGCAGTATCCCA",1,81.42,10.56,-0.2,0.06,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAGGCAGTTTTGTA",7,136.84,9.92,-0.85,0.09,2.22,1.04,0,">1 nonsynonymous","V32K C61L A105V",3
"lib1","SARS-CoV-2","ATTAGGCATAAAAAAC",2,5.27,8.6,-2.16,0.15,3,1.05,0.01,">1 nonsynonymous","A42T T85D D97I Y119D",4
"lib1","SARS-CoV-2","ATTAGGCATAAAAGGG",2,44.77,10.66,-0.1,0.06,2.88,1.06,0,">1 nonsynonymous","R27I T100K",2
"lib1","SARS-CoV-2","ATTAGGCATCAGCATC",2,27.14,10.08,-0.68,0.08,2.05,1.03,0,">1 nonsynonymous","N4E E10D S69R T148L",4
"lib1","SARS-CoV-2","ATTAGGCGTAAAATGG",1,14.19,9.29,-1.47,0.24,1.5,1.08,0.04,">1 nonsynonymous","N13P G174Q",2
"lib1","SARS-CoV-2","ATTAGGCTAAGTGTTA",5,97.42,10.74,-0.03,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTAGGCTACTACGTA",4,72.14,10.3,-0.47,0.05,2.85,1.04,0,">1 nonsynonymous","R27K Y123I",2
"lib1","SARS-CoV-2","ATTAGGCTACTGAAAA",6,38.02,10.67,-0.1,0.05,2.95,1,0,">1 nonsynonymous","I104L E141S",2
"lib1","SARS-CoV-2","ATTAGGCTGCACGGTA",3,41.73,10.81,0.05,0.08,2.9,1,0,"1 nonsynonymous","K198W",1
"lib1","SARS-CoV-2","ATTAGGGACATAACTT",4,18.64,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","L38M E135D G166Y V182F",4
"lib1","SARS-CoV-2","ATTAGGTTAACAATTC",4,76.63,6,-4.76,0.77,1.5,1.11,0.01,">1 nonsynonymous","W106C R127T S147H",3
"lib1","SARS-CoV-2","ATTAGGTTAAGAAATA",1,39.68,9.69,-1.08,0.07,2.86,1.07,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","ATTAGTAAAAAAAACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","ATTAGTAAAGGGTGAT",5,44.58,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y123D D137P Y165I",3
"lib1","SARS-CoV-2","ATTAGTAAATGCTGCT",3,57.19,10.56,-0.2,0.05,2.96,1,0,">1 nonsynonymous","C61F N151S K199I",3
"lib1","SARS-CoV-2","ATTAGTAACCCTAATC",6,97.69,10.46,-0.31,0.03,2.87,1.06,0,">1 nonsynonymous","G146H T201Y",2
"lib1","SARS-CoV-2","ATTAGTAAGATAATAA",2,24.76,10.04,-0.73,0.19,2.16,1.02,0.01,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","ATTAGTAAGCCTGAAG",13,78.32,9.81,-0.95,0.17,1.74,1.11,0.01,">1 nonsynonymous","E10S F70M L122I",3
"lib1","SARS-CoV-2","ATTAGTAATACATCCT",3,47.33,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y91I V103F N120L Q163S R179G",5
"lib1","SARS-CoV-2","ATTAGTAATATCAACG",1,24.73,9.03,-1.74,0.16,1.81,1.15,0.01,">1 nonsynonymous","L5Q G86A",2
"lib1","SARS-CoV-2","ATTAGTAATGGTATTC",2,24.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","ATTAGTACGTTGCATT",1,16.67,6.56,-4.2,0.58,1.5,1.14,0.05,">1 nonsynonymous","R136F Y178L",2
"lib1","SARS-CoV-2","ATTAGTAGCATGTCTG",5,128.72,8.73,-2.04,0.1,2.73,1.13,0,">1 nonsynonymous","C6Y L125A Y143L K198S",4
"lib1","SARS-CoV-2","ATTAGTAGTGAAAAGG",8,129.26,8.9,-1.86,0.15,1.76,1.11,0.01,">1 nonsynonymous","C6F N107S",2
"lib1","SARS-CoV-2","ATTAGTATCAAAACGA",4,48.23,8.45,-2.31,0.13,2.72,1.13,0,">1 nonsynonymous","S45C C61L K87V T170M",4
"lib1","SARS-CoV-2","ATTAGTCACACTGACA",2,100.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6H F17L R27H C102R N120L P177G",6
"lib1","SARS-CoV-2","ATTAGTCAGTCTGTAC",1,7.87,6.22,-4.54,0.97,1.5,1.16,0.05,">1 nonsynonymous","E76R Q144R",2
"lib1","SARS-CoV-2","ATTAGTCCAAATAAGA",7,66.68,7.71,-3.05,0.31,1.5,1.15,0.03,">1 nonsynonymous","C6W W106V G116H",3
"lib1","SARS-CoV-2","ATTAGTCCTTGATATA",6,64.87,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S19R R27W F44S P82G P191T",5
"lib1","SARS-CoV-2","ATTAGTCGCACGGAGC",1,5.87,7.15,-3.62,0.62,1.5,1.06,0.07,">1 nonsynonymous","N58P I88V P96M T148G V181R",5
"lib1","SARS-CoV-2","ATTAGTGACAAAATTA",5,116.13,10.68,-0.08,0.05,2.89,1.04,0,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","ATTAGTGCCTTGGTTT",1,61.04,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","I142N Y159E",2
"lib1","SARS-CoV-2","ATTAGTGGAGCACTAA",3,52.18,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N30A V77T S108K",3
"lib1","SARS-CoV-2","ATTAGTTAAAGCAAAA",7,79.48,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N40G C61I Y93C N130F",4
"lib1","SARS-CoV-2","ATTAGTTAATGCCCAA",4,26.18,8.32,-2.44,0.14,2.67,1.05,0.01,">1 nonsynonymous","T63N Y119N K128S F156G A190R",5
"lib1","SARS-CoV-2","ATTAGTTATTTTGTAC",9,103.22,10.6,-0.16,0.05,2.88,1.05,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","ATTAGTTCACTGGCCT",2,0.6,NA,NA,NA,NA,NA,NA,"stop","K26*",1
"lib1","SARS-CoV-2","ATTAGTTCTAGTATTT",3,65.14,10.69,-0.08,0.04,2.89,1.08,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","ATTAGTTGAAGTCCCA",3,45.97,10.08,-0.68,0.07,2.79,1.05,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","ATTAGTTGTTTGTAGC",10,187.86,10.76,-0.01,0.05,2.91,1.04,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","ATTAGTTTTTCGAAAC",1,35.23,10.32,-0.44,0.12,2.56,1,0.01,">1 nonsynonymous","A14N K132W N171V",3
"lib1","SARS-CoV-2","ATTAGTTTTTTTTAAC",2,50.37,10.73,-0.03,0.09,2.87,1.04,0,"1 nonsynonymous","D97G",1
"lib1","SARS-CoV-2","ATTATAAAAAGGAGAC",1,5.11,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","C102V K114W P133L P149M G196R",5
"lib1","SARS-CoV-2","ATTATAAAATAGTATT",6,28.56,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V11G T46A P82D D90W T140P",5
"lib1","SARS-CoV-2","ATTATAAAATCTAAAA",1,29.51,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","F99R S129M",2
"lib1","SARS-CoV-2","ATTATAAACGATATTG",2,19.76,9.41,-1.36,0.1,2.94,1.05,0,">1 nonsynonymous","S36V G83R Y119T F134Y V153Y S184T",6
"lib1","SARS-CoV-2","ATTATAAACGATGCCA",1,59.55,10.4,-0.36,0.04,2.91,1.05,0,">1 nonsynonymous","K87N D97I S200P",3
"lib1","SARS-CoV-2","ATTATAAAGACTCCAA",1,16.74,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A42G I72H F99H",3
"lib1","SARS-CoV-2","ATTATAAATCATGTTA",9,157.02,6,-4.76,1.18,1.5,1.19,0.01,">1 nonsynonymous","N40S F99A Y159R",3
"lib1","SARS-CoV-2","ATTATAAATGCCCTTT",3,17.33,6.28,-4.49,0.72,1.5,1.08,0.04,">1 nonsynonymous","I2P D68A A81R",3
"lib1","SARS-CoV-2","ATTATAAATTAGTTCT",1,11.67,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I2R F8T Y91R W106E",4
"lib1","SARS-CoV-2","ATTATAAATTATTTAA",4,2.46,NA,NA,NA,NA,NA,NA,"stop","N118* N130G Q144L G174W",4
"lib1","SARS-CoV-2","ATTATAAATTCACACA",1,15,6.54,-4.23,0.54,1.5,1.04,0.03,">1 nonsynonymous","D90K L95P",2
"lib1","SARS-CoV-2","ATTATAACAATTCACA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34* P133L",2
"lib1","SARS-CoV-2","ATTATAACATTTATAA",5,19.87,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C31H G101P",2
"lib1","SARS-CoV-2","ATTATAACCGATCCAG",7,79.49,10.58,-0.18,0.07,2.83,1.08,0,">1 nonsynonymous","C61G A190T",2
"lib1","SARS-CoV-2","ATTATAACCTGAGCCG",9,24.47,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12L Y21K A67P P96L C102Q",5
"lib1","SARS-CoV-2","ATTATAACGCCACTTT",1,68.85,8.44,-2.32,0.08,2.4,1.13,0,">1 nonsynonymous","Y35F D112S",2
"lib1","SARS-CoV-2","ATTATAACGGCCGACA",1,5.15,NA,NA,NA,NA,NA,NA,"stop","N1Y S19* I72S V103G Q168K P177N S184F",7
"lib1","SARS-CoV-2","ATTATAACGTTAACTG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","L5* T15F S41V K128I",4
"lib1","SARS-CoV-2","ATTATAAGACAACCAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56P D90I G166C",3
"lib1","SARS-CoV-2","ATTATAAGAGAGGCTA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","Q84N I142* G174P",3
"lib1","SARS-CoV-2","ATTATAAGTGCTCACT",1,33.84,9.09,-1.67,0.13,2.43,1.07,0.01,">1 nonsynonymous","T15F Y119F",2
"lib1","SARS-CoV-2","ATTATAATAAAAATTT",1,5.96,10.22,-0.54,0.1,3,1.05,0,">1 nonsynonymous","S36Q K87C R136Q P197S",4
"lib1","SARS-CoV-2","ATTATAATAATTAGAC",3,5.57,9.1,-1.66,0.44,1.5,1.2,0.08,">1 nonsynonymous","A33V K48W G155Y",3
"lib1","SARS-CoV-2","ATTATAATATCAAAGC",2,328.46,7.75,-3.01,0.12,1.55,1.1,0,">1 nonsynonymous","S19P Y143C",2
"lib1","SARS-CoV-2","ATTATAATTCTTATTA",12,4.02,NA,NA,NA,NA,NA,NA,"stop","L125C I138* N151M Y165S",4
"lib1","SARS-CoV-2","ATTATAATTGAGAACT",2,10.57,10,-0.76,0.24,1.91,1.08,0.02,">1 nonsynonymous","A14T F47V S139K A190T",4
"lib1","SARS-CoV-2","ATTATAATTTAATTAA",6,154.96,10.33,-0.43,0.02,2.91,1.05,0,"1 nonsynonymous","G166A",1
"lib1","SARS-CoV-2","ATTATAATTTTCAGTC",2,20.21,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P82L E141Q G146N",3
"lib1","SARS-CoV-2","ATTATACACCGGGGAC",1,14.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3D V11T K48W",3
"lib1","SARS-CoV-2","ATTATACACTAAACCA",5,28.06,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5A Y93T G101V N107A G116F R127D C158I",7
"lib1","SARS-CoV-2","ATTATACCACGAAGAT",2,1788.06,9.92,-0.85,0.07,2.17,1.02,0,">1 nonsynonymous","S45V S184A",2
"lib1","SARS-CoV-2","ATTATACCAGAATAAA",2,2.36,NA,NA,NA,NA,NA,NA,"stop","F8T W106L V153I G172* Y178N",5
"lib1","SARS-CoV-2","ATTATACCCCTAAACT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S Y143S",2
"lib1","SARS-CoV-2","ATTATACCGCGTGTCG",3,49.34,10.82,0.06,0.06,2.9,1.04,0,"1 nonsynonymous","K128R",1
"lib1","SARS-CoV-2","ATTATACCGGGACGAT",7,62,6.11,-4.66,0.9,1.5,1.17,0.03,">1 nonsynonymous","I2L F47M K94S D137S N151Q T201R",6
"lib1","SARS-CoV-2","ATTATACCTGGATATA",5,17.1,9.88,-0.89,0.12,2.25,1,0.01,">1 nonsynonymous","K56A R136V S164V",3
"lib1","SARS-CoV-2","ATTATACGACCTTCTT",2,11.85,9.35,-1.41,0.15,2.42,1.14,0.01,">1 nonsynonymous","F47L P149V P169T",3
"lib1","SARS-CoV-2","ATTATACGAGACATCG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","E10P N130L Y143* A192Q",4
"lib1","SARS-CoV-2","ATTATACGTATCTCAA",6,167.18,10.74,-0.02,0.05,2.92,1.03,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","ATTATACTTCAGGTGA",5,51.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D59L N92V I142K",3
"lib1","SARS-CoV-2","ATTATAGAAACCTCGA",8,64.55,8.05,-2.72,0.15,1.65,1.09,0.01,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","ATTATAGAAGCTCAAG",3,9.07,6,-4.76,2,3,1.34,0.04,">1 nonsynonymous","S41L Y50L T63N D90S",4
"lib1","SARS-CoV-2","ATTATAGAAGTCCGTT",2,0.83,NA,NA,NA,NA,NA,NA,"stop","N58A V77S K94* I138E V153L",5
"lib1","SARS-CoV-2","ATTATAGAATACTGGA",2,80.3,10.19,-0.57,0.07,2.73,1.01,0,"1 nonsynonymous","T15C",1
"lib1","SARS-CoV-2","ATTATAGACTAGGAAA",4,27.74,7.41,-3.36,0.27,1.5,1.07,0.02,">1 nonsynonymous","K56T G86C A105S",3
"lib1","SARS-CoV-2","ATTATAGAGCGGCTAC",8,2.69,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","ATTATAGAGGACCAAA",1,28.32,10.76,0,0.26,2.69,1.05,0.03,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","ATTATAGATCAAATCA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R V103G G116A",3
"lib1","SARS-CoV-2","ATTATAGCACCAGACG",11,168.42,10.44,-0.32,0.05,2.9,1.03,0,">1 nonsynonymous","F12I C61E T140N",3
"lib1","SARS-CoV-2","ATTATAGCATATTTGC",4,25.85,10.45,-0.31,0.1,2.85,1.02,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","ATTATAGCGATAGTCG",3,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N Y50F G74D I104E Q144S Q168P",6
"lib1","SARS-CoV-2","ATTATAGGCCGCCCTC",3,35.7,10.59,-0.17,0.06,2.97,1,0,"1 nonsynonymous","I138Y",1
"lib1","SARS-CoV-2","ATTATAGGCGGAGAGG",6,65.33,10.44,-0.32,0.06,2.9,1.08,0,">1 nonsynonymous","L5T K128G E154N",3
"lib1","SARS-CoV-2","ATTATAGGGCTATAAT",4,0.71,NA,NA,NA,NA,NA,NA,"stop","K87N N110* V115L Y119P Y143V",5
"lib1","SARS-CoV-2","ATTATAGGTGCGAGTA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I D112V S164G",3
"lib1","SARS-CoV-2","ATTATAGTAGCAAGTG",2,3.95,NA,NA,NA,NA,NA,NA,"stop","V52R I88F G116* S129K N157C",5
"lib1","SARS-CoV-2","ATTATAGTAGTAATAG",2,25.41,10.18,-0.58,0.09,2.85,1,0.01,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","ATTATAGTCACTTTCC",6,114.21,10.79,0.03,0.09,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATAGTGGCTGAAT",6,19.53,9.26,-1.51,0.1,2.89,1.1,0,"1 nonsynonymous","N157G",1
"lib1","SARS-CoV-2","ATTATATAAAGGCGTA",8,185.82,10.79,0.03,0.06,2.86,1.04,0,"1 nonsynonymous","S129V",1
"lib1","SARS-CoV-2","ATTATATAACAGGAAT",5,42.78,10.76,-0.01,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATATAATTCTGCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31R",1
"lib1","SARS-CoV-2","ATTATATACAGTCACT",1,7.38,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R73M A89K S129R",3
"lib1","SARS-CoV-2","ATTATATATGCACCAT",1,32.82,10.26,-0.51,0.09,2.68,1.12,0,">1 nonsynonymous","N1S T15N",2
"lib1","SARS-CoV-2","ATTATATCACTAAGGA",2,31.19,9.94,-0.83,0.13,2.03,1.06,0.01,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","ATTATATGGAATAAAG",2,0.36,NA,NA,NA,NA,NA,NA,"stop","A33K G51N L57R G83* G116A C150S",6
"lib1","SARS-CoV-2","ATTATATTAGGCTTGC",5,24.03,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F8R K56Y S69D P82V Q168P",5
"lib1","SARS-CoV-2","ATTATATTGATATACG",2,32.93,10.06,-0.7,0.08,2.5,1.01,0,">1 nonsynonymous","Y35S G83S",2
"lib1","SARS-CoV-2","ATTATATTTCAGCTAA",1,82.83,9.87,-0.89,0.04,2.54,1.05,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","ATTATATTTCTTTAAC",1,40.4,9.79,-0.97,0.29,1.5,1,0.07,">1 nonsynonymous","W106I Y121S N151I",3
"lib1","SARS-CoV-2","ATTATCAAAACCCTGG",8,0.55,NA,NA,NA,NA,NA,NA,"stop","N118T K128G G174*",3
"lib1","SARS-CoV-2","ATTATCAACCTCATAT",6,28.44,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F99S S113L",2
"lib1","SARS-CoV-2","ATTATCAACGAAAAGC",8,103.1,8.6,-2.16,0.09,2.61,1.04,0,"1 nonsynonymous","G146I",1
"lib1","SARS-CoV-2","ATTATCAACTCCTAAA",1,39.89,10.77,0.01,0.04,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATCAAGAAAGGTT",3,41.14,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6V S53L Y159C",3
"lib1","SARS-CoV-2","ATTATCAAGTTGAAAG",4,16.15,6.81,-3.95,0.52,1.5,1.22,0.05,">1 nonsynonymous","F44L D68S",2
"lib1","SARS-CoV-2","ATTATCACAATATGGC",1,10.38,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A18K T85N R124K G166Q V173W",5
"lib1","SARS-CoV-2","ATTATCACTCACAAGT",3,30.44,6.49,-4.28,0.56,1.5,1.21,0.03,">1 nonsynonymous","Y66R F99L",2
"lib1","SARS-CoV-2","ATTATCAGAATCCATA",8,85.54,10.68,-0.09,0.07,2.93,1.03,0,"1 nonsynonymous","T140D",1
"lib1","SARS-CoV-2","ATTATCATAATATAAG",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G G83N A89Q",3
"lib1","SARS-CoV-2","ATTATCATGAAATAAC",2,16.71,10.37,-0.4,0.1,2.95,1.06,0.01,">1 nonsynonymous","G83K K198E",2
"lib1","SARS-CoV-2","ATTATCATTAGACAGG",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62D D68G D90I",3
"lib1","SARS-CoV-2","ATTATCATTGTCTGGA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","S29* N110L E141K",3
"lib1","SARS-CoV-2","ATTATCCAAACAGACG",2,1.02,NA,NA,NA,NA,NA,NA,"stop","F8V D98* Y175F",3
"lib1","SARS-CoV-2","ATTATCCAACACAAAA",2,40.87,10.73,-0.03,0.13,2.85,1.1,0.01,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","ATTATCCACGAAAGGC",12,132.55,10.78,0.01,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATCCATAAATTCA",2,15.91,6,-4.76,2,1.5,1.27,0.05,"1 nonsynonymous","F70A",1
"lib1","SARS-CoV-2","ATTATCCATAGTACAG",2,173.6,10.32,-0.45,0.04,2.8,1.03,0,">1 nonsynonymous","G9Q T15G S45T",3
"lib1","SARS-CoV-2","ATTATCCCACCCTATT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","E10F W23* F62P",3
"lib1","SARS-CoV-2","ATTATCCCCAAAGACC",3,9.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15L T100S V103T",3
"lib1","SARS-CoV-2","ATTATCCGAGACGTCA",3,73.78,10.66,-0.1,0.05,2.95,1,0,"1 nonsynonymous","D98R",1
"lib1","SARS-CoV-2","ATTATCCGATTACACA",1,18.06,10.54,-0.22,0.1,2.82,1.07,0.01,">1 nonsynonymous","T85V Q144H",2
"lib1","SARS-CoV-2","ATTATCCTTACCAGCG",6,0.42,NA,NA,NA,NA,NA,NA,"stop","N107Q K114* V153Q",3
"lib1","SARS-CoV-2","ATTATCGAAACAACTA",2,5.04,NA,NA,NA,NA,NA,NA,"stop","A18I Y21* T85N",3
"lib1","SARS-CoV-2","ATTATCGAGCTTTTAA",3,32.28,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G86L F99Y G146P",3
"lib1","SARS-CoV-2","ATTATCGCACTAAACT",1,9.66,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y121C L162W",2
"lib1","SARS-CoV-2","ATTATCGGACATAACT",7,97.1,6.37,-4.39,0.26,1.5,1.1,0,">1 nonsynonymous","Y91S G101N",2
"lib1","SARS-CoV-2","ATTATCGGCAACGGAT",5,21.39,6.2,-4.56,0.66,1.7,1.2,0.01,">1 nonsynonymous","L5F E76I R127G A190G S200I",5
"lib1","SARS-CoV-2","ATTATCGGTCAATCTG",1,20.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y93C G174A T201S",3
"lib1","SARS-CoV-2","ATTATCGTCTAAACGG",6,28.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2R K94T",2
"lib1","SARS-CoV-2","ATTATCTACGTGTTAT",8,5.01,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib1","SARS-CoV-2","ATTATCTAGAAATGTA",7,0,NA,NA,NA,NA,NA,NA,"stop","S41K K56I I88* D98G K114G",5
"lib1","SARS-CoV-2","ATTATCTAGTTATTAC",7,141.08,10.5,-0.27,0.05,2.89,1.05,0,">1 nonsynonymous","D59Q E141F",2
"lib1","SARS-CoV-2","ATTATCTCCTAAACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L S113K T201A",3
"lib1","SARS-CoV-2","ATTATCTCTAACACGA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","E10L L60* L95K",3
"lib1","SARS-CoV-2","ATTATCTCTTATACCA",4,73.78,10.6,-0.16,0.06,2.92,1,0,"1 nonsynonymous","N120W",1
"lib1","SARS-CoV-2","ATTATCTGCGATTTGT",1,7.12,6.86,-3.91,0.82,1.5,1.23,0.05,">1 nonsynonymous","S45N T55I N120Y Q176K",4
"lib1","SARS-CoV-2","ATTATCTTTCTCGATA",1,54.24,8.81,-1.96,0.12,2.76,1.11,0.01,">1 nonsynonymous","S129L G166M",2
"lib1","SARS-CoV-2","ATTATGAAAAATTAAA",1,58.77,10.73,-0.03,0.07,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATGAACGTCCTAA",4,33.51,10.14,-0.62,0.11,2.03,1.02,0.01,">1 nonsynonymous","T3R K48E D90L S129G Q144E",5
"lib1","SARS-CoV-2","ATTATGAATCCCCGAA",2,47.53,8.63,-2.13,0.18,1.9,1.13,0.01,">1 nonsynonymous","Y39R Y91I K114E G155M",4
"lib1","SARS-CoV-2","ATTATGACAAGACTCC",5,34.53,6.85,-3.92,0.23,1.5,1.03,0.01,">1 nonsynonymous","P7L L125Y E154G P169Q",4
"lib1","SARS-CoV-2","ATTATGACATAGTACT",2,75.67,9.76,-1.01,0.1,2.25,1.05,0,">1 nonsynonymous","G83Y A105M",2
"lib1","SARS-CoV-2","ATTATGACCACGAGCA",1,13.49,9.34,-1.43,0.11,1.98,1.07,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","ATTATGACCCGCGGAT",1,7.1,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y66Q N92K E135L G152K",4
"lib1","SARS-CoV-2","ATTATGACTGTGGGTA",23,128.65,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y91I V103S Q163P",3
"lib1","SARS-CoV-2","ATTATGACTTACCCAA",2,8.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y50S F99R",2
"lib1","SARS-CoV-2","ATTATGAGAATCCCCA",1,28.41,8.58,-2.19,0.1,2.21,1.07,0,">1 nonsynonymous","V37E N107L",2
"lib1","SARS-CoV-2","ATTATGAGGACCCCAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","G86M N92* T100R G152D T170R",5
"lib1","SARS-CoV-2","ATTATGAGTAAATTAA",4,1.2,NA,NA,NA,NA,NA,NA,"stop","N40* K48S G166C",3
"lib1","SARS-CoV-2","ATTATGATACAGCTAA",1,15.31,10.81,0.05,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATGATTTACATTA",2,127.26,10.77,0.01,0.07,2.9,1.05,0,"1 nonsynonymous","K199H",1
"lib1","SARS-CoV-2","ATTATGCATCATACGA",5,45.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14D I88N G117S Y143P C150S",5
"lib1","SARS-CoV-2","ATTATGCCACAATTTA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","K87L Y91* W106V N110S G155C H189S T201Y",7
"lib1","SARS-CoV-2","ATTATGCCGTATGTCA",1,46.42,6.83,-3.94,0.42,1.5,1.22,0.03,">1 nonsynonymous","K56V A105N P149T",3
"lib1","SARS-CoV-2","ATTATGCGATTTAAAA",1,9.49,6.2,-4.57,0.66,3,1,0.02,">1 nonsynonymous","F8Y L38R Y121D",3
"lib1","SARS-CoV-2","ATTATGCGCCGCTATA",2,14.58,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K56R W106G C150Y",3
"lib1","SARS-CoV-2","ATTATGCTACATCAAA",5,83.01,9.17,-1.6,0.15,1.83,1.12,0.01,">1 nonsynonymous","F8Q R27S",2
"lib1","SARS-CoV-2","ATTATGCTATCGCTAT",3,138.36,10.44,-0.32,0.05,2.9,1.02,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","ATTATGCTCTATCGAC",3,25.32,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V71R W106L N120L",3
"lib1","SARS-CoV-2","ATTATGCTTGAGATTC",1,64.95,10.67,-0.09,0.08,2.91,1.06,0,">1 nonsynonymous","I2V T201A",2
"lib1","SARS-CoV-2","ATTATGGAATATTACA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56A D90I G152S V180I",4
"lib1","SARS-CoV-2","ATTATGGACCATTAAA",4,18.69,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L5V S69E N107F",3
"lib1","SARS-CoV-2","ATTATGGCATGGTATG",1,8.93,10,-0.77,0.14,2.78,1.07,0.01,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","ATTATGGCGTAACAAC",1,29.23,10.22,-0.55,0.16,2.35,1.04,0.01,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","ATTATGGGATAGATAT",6,168.55,10.49,-0.28,0.04,2.9,1,0,">1 nonsynonymous","N4D S41Y Q84E D97F",4
"lib1","SARS-CoV-2","ATTATGGGCCGCAAGC",3,0.07,NA,NA,NA,NA,NA,NA,"stop","N24R R73V G86R W106* E141C T148G F167V T201S",8
"lib1","SARS-CoV-2","ATTATGGTGAAACACG",4,5.62,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10L S45Y G101N",3
"lib1","SARS-CoV-2","ATTATGGTGTCTAGAC",2,93.42,10.75,-0.01,0.07,2.93,1.03,0,">1 nonsynonymous","F8L T63E",2
"lib1","SARS-CoV-2","ATTATGGTTCCGCAAG",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93A V103I P133L C150S V181R A190Y",6
"lib1","SARS-CoV-2","ATTATGTAAGTGAATT",7,97.28,9.93,-0.83,0.05,2.83,1.05,0,">1 nonsynonymous","G83Y F156N",2
"lib1","SARS-CoV-2","ATTATGTACTTTATAG",7,86.8,10.36,-0.4,0.1,2.8,1.02,0.01,">1 nonsynonymous","S139D F156L",2
"lib1","SARS-CoV-2","ATTATGTCGCGTTTTA",3,37.78,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","F47L V52L K56V D90A Y123V D137P",6
"lib1","SARS-CoV-2","ATTATGTCTCAACGTA",2,65.64,10.6,-0.16,0.03,2.85,1.07,0,"1 nonsynonymous","E141F",1
"lib1","SARS-CoV-2","ATTATGTGACAACCAT",1,20.54,10.75,-0.01,0.08,2.91,1.01,0,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","ATTATGTTGTTACTTA",5,46.97,8.31,-2.46,0.18,2.27,1.06,0.01,">1 nonsynonymous","D34Q T63C T170N",3
"lib1","SARS-CoV-2","ATTATTAAACAGAAAA",1,39.77,10.72,-0.05,0.08,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATTAAAGCATACA",4,20.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4L A33D S41M L162E",4
"lib1","SARS-CoV-2","ATTATTAAAGCTATTT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","L5R G9N K56* F62S S129Y Y143F L183A",7
"lib1","SARS-CoV-2","ATTATTAAAGTAGTCA",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M F44Q L60A L95T Q144P T170I",6
"lib1","SARS-CoV-2","ATTATTAACAACAGTG",4,22.87,10.91,0.15,0.1,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATTAAGAGCAAGC",1,11.32,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","R25N C49S P133S",3
"lib1","SARS-CoV-2","ATTATTAAGTAGAAAT",2,5.54,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","C6R S41V R73L C102L R136N T201M",6
"lib1","SARS-CoV-2","ATTATTAATCAGGAAT",5,52.38,6.42,-4.34,0.29,1.5,1.07,0.01,">1 nonsynonymous","L38T Q168R Y175S",3
"lib1","SARS-CoV-2","ATTATTAATCTCACAA",8,15.77,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34N K56S L95M C102T Y123F G146E V180K",7
"lib1","SARS-CoV-2","ATTATTACAGAGAGAA",7,54.47,10.25,-0.51,0.08,2.7,1.05,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","ATTATTACCACAAGAC",2,49.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5Q A18V F62S S69G A89N L122A",6
"lib1","SARS-CoV-2","ATTATTACTATAGACC",9,116.58,10.74,-0.02,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATTAGCGAAAGGG",4,42.04,9.84,-0.93,0.14,2.08,1.16,0.01,">1 nonsynonymous","L5R A14C F47L",3
"lib1","SARS-CoV-2","ATTATTAGCTCTATAT",10,105.48,10.1,-0.66,0.09,2.46,1.02,0,">1 nonsynonymous","T15G R27V N58W",3
"lib1","SARS-CoV-2","ATTATTATATTTACAG",5,0.65,NA,NA,NA,NA,NA,NA,"stop","G155*",1
"lib1","SARS-CoV-2","ATTATTATGATAACCA",1,1.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","ATTATTATGTAACAGC",7,95.86,7.99,-2.78,0.24,1.5,1.14,0.02,">1 nonsynonymous","Y39R N64A G86A G174Y",4
"lib1","SARS-CoV-2","ATTATTATGTTAAATC",4,83,9.39,-1.37,0.12,2.17,1.13,0.01,">1 nonsynonymous","N107T K198I",2
"lib1","SARS-CoV-2","ATTATTATTATTTAAT",2,23.09,10.83,0.06,0.07,2.97,1.01,0,"1 nonsynonymous","K128D",1
"lib1","SARS-CoV-2","ATTATTATTCGAATGT",4,111.88,6,-4.76,1.2,1.5,1.18,0.01,">1 nonsynonymous","F44M R73L Q176L",3
"lib1","SARS-CoV-2","ATTATTCAAGAAACAT",6,122.67,10.77,0,0.05,2.93,1.04,0,">1 nonsynonymous","Y39Q K48E S164H",3
"lib1","SARS-CoV-2","ATTATTCAATATTATC",2,46.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N58T G86P Y159P",3
"lib1","SARS-CoV-2","ATTATTCATAAAATAA",5,21.78,9.88,-0.88,0.25,1.78,1.09,0.05,">1 nonsynonymous","S43V L162R",2
"lib1","SARS-CoV-2","ATTATTCATATTCAGG",4,1.08,NA,NA,NA,NA,NA,NA,"stop","C6L A14* C49I P82Y D98T Y121R S184C",7
"lib1","SARS-CoV-2","ATTATTCATCCAATCA",6,72.44,7.24,-3.52,0.4,1.5,1.13,0.03,">1 nonsynonymous","G117D E135M P149L L188I",4
"lib1","SARS-CoV-2","ATTATTCCATATCTCG",3,95.93,10.54,-0.23,0.05,2.91,1,0,">1 nonsynonymous","G9L V37K",2
"lib1","SARS-CoV-2","ATTATTCTACCATCGA",1,35.45,10.25,-0.52,0.13,2.56,1,0.01,"1 nonsynonymous","A81H",1
"lib1","SARS-CoV-2","ATTATTCTTACAAACA",1,24.98,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V20R D90F F156T T170S G174W",5
"lib1","SARS-CoV-2","ATTATTCTTCCAATGA",5,152.01,8.39,-2.38,0.17,2.55,1.09,0.01,">1 nonsynonymous","L125K T140H",2
"lib1","SARS-CoV-2","ATTATTGACGTTTTCG",1,7.52,10.88,0.12,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTATTGATGCTATCT",3,11.34,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","A33T Y50D Q84H T100S N107F E141G",6
"lib1","SARS-CoV-2","ATTATTGCGGTCACAC",8,135.81,10.51,-0.25,0.04,2.93,1,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","ATTATTGGTGACGACA",2,59.86,10.15,-0.62,0.09,2.71,1.02,0,">1 nonsynonymous","V37W Y91S",2
"lib1","SARS-CoV-2","ATTATTGTCTAAAGCA",5,71.65,10.63,-0.14,0.06,2.94,1.03,0,">1 nonsynonymous","N4P G83N",2
"lib1","SARS-CoV-2","ATTATTTAATTAAAAA",2,6.72,6,-4.76,1.19,1.5,1.05,0.01,">1 nonsynonymous","C6N Y50N S113Y",3
"lib1","SARS-CoV-2","ATTATTTAGCACGTGT",2,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P G83L A89R N107A F160R K198Q",6
"lib1","SARS-CoV-2","ATTATTTATTATCCTT",5,40.42,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","S129K P133T Y178R",3
"lib1","SARS-CoV-2","ATTATTTCCAATCAAG",7,51.53,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","A22C L60H G83S V115L R127S",5
"lib1","SARS-CoV-2","ATTATTTGAAAAAGAC",6,39.88,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5M F12D G166K T201K",4
"lib1","SARS-CoV-2","ATTCAAAAACAATCAC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","V11Y A18E A81L Y93* L122I",5
"lib1","SARS-CoV-2","ATTCAAAAACGCCTCT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S P96L K199T",3
"lib1","SARS-CoV-2","ATTCAAAAATGAAATA",2,77.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V103T Q176T",2
"lib1","SARS-CoV-2","ATTCAAAACTCGTCCA",3,18.76,9.45,-1.31,0.19,1.79,1.15,0.01,">1 nonsynonymous","T3G N13V N130T",3
"lib1","SARS-CoV-2","ATTCAAAAGGTTGCCA",7,0,NA,NA,NA,NA,NA,NA,"stop","L57* Q144S F156M T201S",4
"lib1","SARS-CoV-2","ATTCAAACATATTCGA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","A18G V71Y A81I Y175C S200*",5
"lib1","SARS-CoV-2","ATTCAAACCAGCCCAG",4,36.94,10.4,-0.36,0.11,2.35,1.06,0.01,">1 nonsynonymous","G83Y D90F",2
"lib1","SARS-CoV-2","ATTCAAACCGCAGGAC",1,13.09,6.54,-4.23,0.52,1.5,1.08,0.02,">1 nonsynonymous","S19R T55Y I104M Q144R Q168E",5
"lib1","SARS-CoV-2","ATTCAAACCGTGTTGG",1,58.5,10.4,-0.36,0.05,2.88,1,0,">1 nonsynonymous","C61N L122V G152L",3
"lib1","SARS-CoV-2","ATTCAAACTGAATGAA",11,236.1,10.7,-0.07,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCAAATAATCGAGC",7,100.26,10.77,0,0.1,2.88,1.06,0,">1 nonsynonymous","T3S S43L",2
"lib1","SARS-CoV-2","ATTCAAATAGAACATG",3,35.73,10.07,-0.69,0.04,2.88,1,0,">1 nonsynonymous","K114C G155N",2
"lib1","SARS-CoV-2","ATTCAAATAGAGTGCA",4,14.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N107G Y121V",2
"lib1","SARS-CoV-2","ATTCAAATATTCTACT",1,50.69,10.81,0.04,0.07,2.95,1.02,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","ATTCAAATCTCCATTG",9,22.61,6.14,-4.63,1.3,1.5,1.24,0.05,">1 nonsynonymous","D98M A105P V153A",3
"lib1","SARS-CoV-2","ATTCAAATGTAAAAAG",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75R T85P L183H",3
"lib1","SARS-CoV-2","ATTCAACAGAGGCATG",2,18.14,10.76,0,0.1,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCAACAGCCGAAAT",3,24.05,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V11D S19W G172M",3
"lib1","SARS-CoV-2","ATTCAACAGGTATAAC",2,32.88,10.35,-0.41,0.04,2.98,1,0,">1 nonsynonymous","Y35T P149S",2
"lib1","SARS-CoV-2","ATTCAACATAAAGAAT",4,94.13,10.3,-0.46,0.07,2.82,1,0,">1 nonsynonymous","K56R F62H F134L G196S",4
"lib1","SARS-CoV-2","ATTCAACATAACCGAA",1,5.53,11.03,0.27,0.13,3,1,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","ATTCAACATCGATACG",1,36.95,10.8,0.04,0.12,2.86,1.04,0,">1 nonsynonymous","D59A F160R",2
"lib1","SARS-CoV-2","ATTCAACGATTCTATC",3,46.4,10.43,-0.33,0.08,2.86,1.02,0,">1 nonsynonymous","N40R N64P D90S A190E",4
"lib1","SARS-CoV-2","ATTCAACGCACGACCC",2,21.56,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G166R V182F",2
"lib1","SARS-CoV-2","ATTCAACGCGAGCACT",2,32.08,10.32,-0.45,0.07,2.87,1,0,">1 nonsynonymous","K87S K132Y",2
"lib1","SARS-CoV-2","ATTCAACGTCAGAGCT",2,40,10.01,-0.76,0.07,2.28,1.01,0,">1 nonsynonymous","F44S N110P T140A",3
"lib1","SARS-CoV-2","ATTCAACTACCTAGAC",6,128.38,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40Y F47D K56V Y159T S184K K198Q",6
"lib1","SARS-CoV-2","ATTCAACTTAGTGGTA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","T3E Y50C A105V P133* C150G G172S",6
"lib1","SARS-CoV-2","ATTCAAGAAAGCAGCC",2,43.78,9.81,-0.96,0.12,1.89,1.06,0,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","ATTCAAGAACGTGCCA",5,75.18,10.21,-0.56,0.06,2.85,1,0,">1 nonsynonymous","T100M N107R",2
"lib1","SARS-CoV-2","ATTCAAGACGCAGATA",1,23.52,9.16,-1.61,0.13,1.91,1.1,0.01,"1 nonsynonymous","P82R",1
"lib1","SARS-CoV-2","ATTCAAGAGCTTAAGT",2,150.38,9.04,-1.73,0.07,2.7,1.13,0,">1 nonsynonymous","F44V T85K Y119T",3
"lib1","SARS-CoV-2","ATTCAAGCAAATTATT",6,59.73,10.15,-0.62,0.09,2.68,1,0,">1 nonsynonymous","S36A S41K S139H",3
"lib1","SARS-CoV-2","ATTCAAGCGAATAGGC",3,11.57,10.37,-0.39,0.08,2.85,1.07,0,">1 nonsynonymous","T63A G152L",2
"lib1","SARS-CoV-2","ATTCAAGGCAATACAA",5,13.38,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5K T15M G86E P96R",4
"lib1","SARS-CoV-2","ATTCAAGGCACTGAGC",1,18.77,8.57,-2.19,0.24,1.5,1.17,0.02,">1 nonsynonymous","T55W S69E T201R",3
"lib1","SARS-CoV-2","ATTCAAGGCCGCATTT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","I2M A105*",2
"lib1","SARS-CoV-2","ATTCAAGGGAGATGCA",1,18.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23S V37D T63Y S139P",4
"lib1","SARS-CoV-2","ATTCAAGTATCCGAGG",7,42.54,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","S113R Y119R E154G A190V",4
"lib1","SARS-CoV-2","ATTCAAGTTGTTGATA",1,8.42,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V20R D59Q V77R A89M",4
"lib1","SARS-CoV-2","ATTCAATAAAAATATA",1,61.16,10.68,-0.09,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCAATAAGCGCGGA",2,22.16,9.04,-1.73,0.4,1.5,1,0.07,">1 nonsynonymous","G101C T201R",2
"lib1","SARS-CoV-2","ATTCAATAGCATATGT",1,11.57,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5V Y50I V77G D90Y F160P T170M",6
"lib1","SARS-CoV-2","ATTCAATAGGTGGTCC",9,130.69,6.71,-4.05,0.39,1.5,1.24,0.02,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","ATTCAATGACGAAACT",1,21.71,8.34,-2.43,0.31,1.5,1.01,0.05,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","ATTCAATTTGGGGCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61S R73*",2
"lib1","SARS-CoV-2","ATTCACAAAGGACGGG",4,53.13,8.24,-2.53,0.33,1.5,1.1,0.04,">1 nonsynonymous","P54I A105N Y119G I138E",4
"lib1","SARS-CoV-2","ATTCACAACACAAAAC",13,148.51,10.78,0.01,0.06,2.87,1.08,0,">1 nonsynonymous","N64K S147N",2
"lib1","SARS-CoV-2","ATTCACAACGTATCAC",4,50.38,10.53,-0.23,0.04,2.87,1.05,0,">1 nonsynonymous","G9P S53L",2
"lib1","SARS-CoV-2","ATTCACAATACGAGTC",1,14.41,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","F12Y T85L N107M",3
"lib1","SARS-CoV-2","ATTCACACAGTTCTGA",4,5.46,NA,NA,NA,NA,NA,NA,"stop","D68L Y121W S139* F160Q",4
"lib1","SARS-CoV-2","ATTCACACGTCTTCCT",2,5.37,6.94,-3.83,0.92,3,1,0.01,">1 nonsynonymous","K87L G101A L122A A190Y T201Y",5
"lib1","SARS-CoV-2","ATTCACACTGATCCAT",3,24.62,8.32,-2.44,0.14,1.9,1.15,0.01,">1 nonsynonymous","Y121Q G152R T170C",3
"lib1","SARS-CoV-2","ATTCACAGAATTTGGT",5,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Q P96Q",2
"lib1","SARS-CoV-2","ATTCACAGATACAGTA",1,39.39,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","C6V N40L G51H A145N",4
"lib1","SARS-CoV-2","ATTCACAGTATACTTT",7,0.55,NA,NA,NA,NA,NA,NA,"stop","T3Y Y39I G101L E135D I142* G146V",6
"lib1","SARS-CoV-2","ATTCACATAGTGAAAC",2,1.1,NA,NA,NA,NA,NA,NA,"stop","W23* G51L A89F",3
"lib1","SARS-CoV-2","ATTCACATCGATTATT",8,68.83,9.91,-0.85,0.09,2.07,1.06,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","ATTCACCACTAACCAG",4,29.8,8.73,-2.04,0.15,1.89,1.18,0.01,">1 nonsynonymous","E10D S45V K132S G174T",4
"lib1","SARS-CoV-2","ATTCACCAGGACTTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","V11N V115P T201*",3
"lib1","SARS-CoV-2","ATTCACCATGAAAAAA",1,0.86,NA,NA,NA,NA,NA,NA,"stop","N40F G51S D112* C158P",4
"lib1","SARS-CoV-2","ATTCACCCACTATACC",1,22.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6D A22S G83T W106L T148A",5
"lib1","SARS-CoV-2","ATTCACCCATGACCTA",1,3.18,NA,NA,NA,NA,NA,NA,"stop","G116S F167W P177* A190G",4
"lib1","SARS-CoV-2","ATTCACCCTGCTTCAA",5,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30E V37L L122V",3
"lib1","SARS-CoV-2","ATTCACCTGATATGGT",3,0.24,NA,NA,NA,NA,NA,NA,"stop","E10G V37I N58I S139*",4
"lib1","SARS-CoV-2","ATTCACGACATCTAAT",1,11.11,9.12,-1.65,0.15,2.1,1.03,0.01,">1 nonsynonymous","D90I D97H",2
"lib1","SARS-CoV-2","ATTCACGAGAGTCTGA",2,67.23,10.68,-0.08,0.04,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCACGAGCATTAAG",2,12.28,7.47,-3.29,0.26,1.5,1.09,0.05,">1 nonsynonymous","P7L K87I Y123G",3
"lib1","SARS-CoV-2","ATTCACGATAACAACC",5,1.68,NA,NA,NA,NA,NA,NA,"stop","F44R Y93* N151P L162V",4
"lib1","SARS-CoV-2","ATTCACGATAATGAGC",5,24.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23C S41P K56L P149V",4
"lib1","SARS-CoV-2","ATTCACGATTTTAACA",3,9.49,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F12S G83S S139L",3
"lib1","SARS-CoV-2","ATTCACGCCTCTGTAC",1,10.94,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","I28C C49T K94T V103R N118P L125R",6
"lib1","SARS-CoV-2","ATTCACGTTCGAGTAT",8,120.27,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N58F T85L Y178P",3
"lib1","SARS-CoV-2","ATTCACTAACCTTTAA",3,11.17,6,-4.76,2,1.5,1.25,0.08,">1 nonsynonymous","Y121S V181P",2
"lib1","SARS-CoV-2","ATTCACTAACGCGGAA",3,15.53,6.42,-4.35,0.23,3,1.1,0,">1 nonsynonymous","C61F D137H",2
"lib1","SARS-CoV-2","ATTCACTAACGCGGTG",2,13.47,7.14,-3.62,0.36,1.87,1.06,0.02,">1 nonsynonymous","D90R R127T L131E",3
"lib1","SARS-CoV-2","ATTCACTAAGTAAAAA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","N64T G83R I88W G152V F156*",5
"lib1","SARS-CoV-2","ATTCACTACACGCGCA",2,17.6,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A67Y G86L N110K S164F",4
"lib1","SARS-CoV-2","ATTCACTACCCTTTCC",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Q A14C T148A",3
"lib1","SARS-CoV-2","ATTCACTACGATATGA",5,70.16,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19M A42G D112L P169D",4
"lib1","SARS-CoV-2","ATTCACTCAATGGGAG",3,61.42,10.8,0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCACTTAAGGATTA",2,11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43F F156H R179P",3
"lib1","SARS-CoV-2","ATTCACTTAAGTAAGT",2,1.7,NA,NA,NA,NA,NA,NA,"stop","L57*",1
"lib1","SARS-CoV-2","ATTCACTTTTAACTAC",4,28.34,9.92,-0.84,0.13,1.87,1.06,0.02,">1 nonsynonymous","T63K L131N",2
"lib1","SARS-CoV-2","ATTCAGAAAGGCCACC",7,122.06,10.03,-0.74,0.08,2.41,1.04,0,">1 nonsynonymous","N64R D98Y P191C",3
"lib1","SARS-CoV-2","ATTCAGAAATTATAGC",2,20.08,6.39,-4.37,0.67,1.5,1.11,0.03,">1 nonsynonymous","S43L N120V R179E L188K",4
"lib1","SARS-CoV-2","ATTCAGAACCAGGATA",1,30.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G101V Y143L Q163K",3
"lib1","SARS-CoV-2","ATTCAGAACCTGGAAT",3,37.64,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V37Y N107H V115L Y123D",4
"lib1","SARS-CoV-2","ATTCAGAATAAGAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3I I28R A42* D97I S139C",5
"lib1","SARS-CoV-2","ATTCAGACAGCACACA",2,53.93,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","L60M K87W Y159S",3
"lib1","SARS-CoV-2","ATTCAGACCTATTGTC",4,47.12,9.85,-0.92,0.09,2,1.08,0,">1 nonsynonymous","T3E D98V K132V P169T",4
"lib1","SARS-CoV-2","ATTCAGACGCACCACG",1,29.4,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G51V C61T Y93A",3
"lib1","SARS-CoV-2","ATTCAGACGCGAAAGG",2,22.46,10.67,-0.09,0.11,2.84,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTCAGAGAATCCATC",3,21.41,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","F17L R25H Y91N D98E W106R",5
"lib1","SARS-CoV-2","ATTCAGAGACAGGGAC",1,37.92,6.05,-4.72,1.05,1.5,1.16,0.02,">1 nonsynonymous","F8P V32Q A42R D68Y F160A",5
"lib1","SARS-CoV-2","ATTCAGAGTAGCGGAT",1,22.88,10.05,-0.71,0.14,2.75,1.07,0.01,">1 nonsynonymous","Y93F K198E",2
"lib1","SARS-CoV-2","ATTCAGCATGAAGACT",4,7.02,6,-4.76,1.18,3,1.34,0.01,">1 nonsynonymous","P82T D90M V103T",3
"lib1","SARS-CoV-2","ATTCAGCATTCTGAGC",4,36.92,9.73,-1.04,0.15,2.05,1.06,0.01,">1 nonsynonymous","D34C F44R",2
"lib1","SARS-CoV-2","ATTCAGCCTTATCTCA",12,8.28,NA,NA,NA,NA,NA,NA,"stop","L5D S43L K56* T63G",4
"lib1","SARS-CoV-2","ATTCAGCGATATTCGG",8,129.44,6,-4.76,0.83,1.5,1.15,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","ATTCAGCTATGCGCAG",2,38.22,8.34,-2.42,0.3,1.5,1.1,0.03,">1 nonsynonymous","R27E S36L K132I Q163P",4
"lib1","SARS-CoV-2","ATTCAGCTTACAAATA",2,9.81,10.72,-0.04,0.12,2.91,1,0.01,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","ATTCAGGAAGTAAATA",5,37.45,7,-3.76,0.35,1.5,1.05,0.04,">1 nonsynonymous","G9S E76N S129C S147T Y175I T201L",6
"lib1","SARS-CoV-2","ATTCAGGACATAAGTA",1,50.6,8.58,-2.18,0.2,1.5,1.02,0.01,">1 nonsynonymous","E10N D59A P133N",3
"lib1","SARS-CoV-2","ATTCAGGCATGAAAGT",1,89.09,9.24,-1.52,0.06,2.8,1.09,0,">1 nonsynonymous","T100Y Y143T",2
"lib1","SARS-CoV-2","ATTCAGGTATTGAAAC",2,28.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K26Q Y119N G166N P177H H189Y",5
"lib1","SARS-CoV-2","ATTCAGTAAGTATGTG",12,2.6,NA,NA,NA,NA,NA,NA,"stop","C6* A18L T55R",3
"lib1","SARS-CoV-2","ATTCAGTAATTACGAA",2,13.79,6,-4.76,1.17,1.89,1.19,0.02,">1 nonsynonymous","W23R K87S P96N",3
"lib1","SARS-CoV-2","ATTCAGTATACATGAG",9,73.51,9.91,-0.85,0.04,2.88,1.03,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","ATTCAGTGTGATAAGT",1,6.58,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A42C D68E D97N C150N",4
"lib1","SARS-CoV-2","ATTCAGTTCTAAAATC",1,16.12,6.61,-4.16,0.85,1.5,1.09,0.02,">1 nonsynonymous","Y91P V103Y",2
"lib1","SARS-CoV-2","ATTCATAAAAAAATAC",3,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N K87Y P96L Y123V A190N",5
"lib1","SARS-CoV-2","ATTCATAAAAGTAAAC",3,13.4,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V20D F160Y",2
"lib1","SARS-CoV-2","ATTCATAAACAAAAAA",4,12.74,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","V77Y K94L Y119T C150R Y159T L183S",6
"lib1","SARS-CoV-2","ATTCATACATCACGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I Y119P",2
"lib1","SARS-CoV-2","ATTCATACTCTCCACC",14,255.12,10.72,-0.05,0.05,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTCATAGACATATGA",6,61.19,10.02,-0.75,0.12,2.23,1.07,0.01,">1 nonsynonymous","S139I P149S",2
"lib1","SARS-CoV-2","ATTCATAGCCTCTTAA",2,25.58,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y50F L60Y S113R Y143S",4
"lib1","SARS-CoV-2","ATTCATAGTTTAATGA",6,19.44,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","Y50N Y93W V181S",3
"lib1","SARS-CoV-2","ATTCATATAAATTCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39E S45T A67P D98S Y175M",5
"lib1","SARS-CoV-2","ATTCATATCGTGACGG",1,15.5,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","N4R I80M D97F K128S N157R",5
"lib1","SARS-CoV-2","ATTCATATGCAGAGAT",4,1.98,NA,NA,NA,NA,NA,NA,"stop","N13Y I28E P96L K128* F156V",5
"lib1","SARS-CoV-2","ATTCATATTACTGGCT",1,27.09,10.82,0.05,0.08,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCATCATAAATATG",1,68.91,9.72,-1.04,0.07,2.62,1.04,0,">1 nonsynonymous","V20P C61M E154L",3
"lib1","SARS-CoV-2","ATTCATCATATAATGC",4,105.25,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","F99T Q176S",2
"lib1","SARS-CoV-2","ATTCATCCCGAATTAC",1,9.23,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N118V R136N",2
"lib1","SARS-CoV-2","ATTCATCCTAACGAAA",6,135.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L G86C F156C",3
"lib1","SARS-CoV-2","ATTCATGAAATAACAA",2,44.9,8.3,-2.46,0.11,1.84,1.06,0.01,">1 nonsynonymous","E10H K26S T55Q N120V S129L T170G",6
"lib1","SARS-CoV-2","ATTCATGAATAATTCA",2,13.09,8.94,-1.83,0.08,1.82,1.11,0.01,">1 nonsynonymous","A22S N107S N120W",3
"lib1","SARS-CoV-2","ATTCATGACAAGCTCA",1,8.78,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F99S G174D",2
"lib1","SARS-CoV-2","ATTCATGATTATACAA",3,35.94,6.52,-4.25,0.54,1.5,1.31,0.03,">1 nonsynonymous","D34R L60N G155F",3
"lib1","SARS-CoV-2","ATTCATGCCAGGAATC",3,21.45,10.37,-0.39,0.1,2.81,1.03,0,">1 nonsynonymous","T85Y Y91L",2
"lib1","SARS-CoV-2","ATTCATGCGGTAGACA",23,194.27,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14N R78C N107W",3
"lib1","SARS-CoV-2","ATTCATGCTGTATATA",12,208.39,10.44,-0.33,0.04,2.89,1.02,0,">1 nonsynonymous","L60P Y123K",2
"lib1","SARS-CoV-2","ATTCATGGCATATACG",4,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P W106C I138L P149V F156H",5
"lib1","SARS-CoV-2","ATTCATGTACCATACG",9,149.95,10.73,-0.03,0.05,2.95,1.02,0,"1 nonsynonymous","V32L",1
"lib1","SARS-CoV-2","ATTCATTACCGATCCG",3,92.27,9.15,-1.61,0.14,1.99,1.17,0.01,">1 nonsynonymous","S29Y Y121S K128S N151H",4
"lib1","SARS-CoV-2","ATTCATTACCGTTAAT",3,59.91,10.54,-0.23,0.05,2.97,1.02,0,">1 nonsynonymous","S43K C61K S184D K199T",4
"lib1","SARS-CoV-2","ATTCATTAGAATTACG",4,131.95,8.79,-1.97,0.14,1.5,1.16,0.01,">1 nonsynonymous","N30K L131A Q168R",3
"lib1","SARS-CoV-2","ATTCATTATAGCCAAC",1,53.33,10.71,-0.06,0.07,2.89,1.07,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","ATTCATTATAGTCGGT",5,77.53,10.54,-0.23,0.07,2.88,1.03,0,">1 nonsynonymous","N1I I138K",2
"lib1","SARS-CoV-2","ATTCATTATTGCCATT",4,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D59R L95P W106G Y119L P149I V182S",7
"lib1","SARS-CoV-2","ATTCATTCTACGTATT",3,20.05,6.12,-4.64,0.84,1.5,1.16,0.02,">1 nonsynonymous","A89E R136H",2
"lib1","SARS-CoV-2","ATTCATTCTGTCTATC",2,52.58,10.68,-0.08,0.08,2.96,1.01,0,"1 nonsynonymous","L60H",1
"lib1","SARS-CoV-2","ATTCATTGATCCCAAC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","S19* Y119C",2
"lib1","SARS-CoV-2","ATTCATTTACATCCCA",5,84.58,10.49,-0.27,0.05,2.88,1.06,0,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","ATTCATTTACCCTTTA",1,5.86,NA,NA,NA,NA,NA,NA,"stop","S69R F99L S200*",3
"lib1","SARS-CoV-2","ATTCATTTAGCCAGAA",1,5.63,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L5C D34V V52Y T85R K128S C158P",6
"lib1","SARS-CoV-2","ATTCATTTTATCGTTT",5,19.19,9.78,-0.98,0.09,2.58,1,0,">1 nonsynonymous","L38V S129N G146D",3
"lib1","SARS-CoV-2","ATTCCAAAACAATGAA",4,23.3,7.09,-3.67,0.25,1.5,1.16,0.02,">1 nonsynonymous","F12R R78Y P96T E141I",4
"lib1","SARS-CoV-2","ATTCCAAACGTTCGCA",4,83.8,8.11,-2.65,0.26,1.5,1.16,0.02,">1 nonsynonymous","G86M E141N",2
"lib1","SARS-CoV-2","ATTCCAAATTAAATCG",4,18.67,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","F17R L95Q R124K L131P",4
"lib1","SARS-CoV-2","ATTCCAAATTAATACA",10,122.76,10.18,-0.58,0.05,2.72,1.04,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","ATTCCAAATTAGATGC",2,6.91,9.7,-1.06,0.23,2.73,1.18,0.01,">1 nonsynonymous","C6G N13S K128G",3
"lib1","SARS-CoV-2","ATTCCAACGAATAGGA",1,18.39,10.29,-0.47,0.14,2.04,1.08,0.01,">1 nonsynonymous","V37K W106S K198M",3
"lib1","SARS-CoV-2","ATTCCAAGAGTCCTTT",4,76.04,10.64,-0.13,0.05,2.89,1.06,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","ATTCCAATTTCATTGA",5,21.89,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","E10Y F99R N120W R136F",4
"lib1","SARS-CoV-2","ATTCCACAGATCAGTG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","V37* D112E P149L P197T",4
"lib1","SARS-CoV-2","ATTCCACATATACCTT",3,15.88,6.16,-4.6,0.58,2.17,1.17,0.01,">1 nonsynonymous","G9K A81M F99N G152I",4
"lib1","SARS-CoV-2","ATTCCACATCGAATGG",5,36.11,6,-4.76,2,3,1.2,0,">1 nonsynonymous","A33R P177Y",2
"lib1","SARS-CoV-2","ATTCCACATTCCAGGA",5,165.1,10.74,-0.02,0.05,2.87,1.09,0,">1 nonsynonymous","I2S A190L S200N",3
"lib1","SARS-CoV-2","ATTCCACCCCTCAGGT",2,44.9,10.19,-0.57,0.12,2.4,1,0.01,">1 nonsynonymous","N58S K128F K132V",3
"lib1","SARS-CoV-2","ATTCCACCGGGCCGAT",1,47.92,10.05,-0.71,0.03,2.9,1,0,"1 nonsynonymous","A145Q",1
"lib1","SARS-CoV-2","ATTCCACCTCCAATTC",2,26.62,10.47,-0.3,0.05,2.91,1.01,0,">1 nonsynonymous","V65F K132L I138E",3
"lib1","SARS-CoV-2","ATTCCACCTTTTATCA",2,20.96,8.87,-1.9,0.47,1.5,1.01,0.07,">1 nonsynonymous","N58L G146I",2
"lib1","SARS-CoV-2","ATTCCAGACATATATG",2,49.52,10.58,-0.18,0.03,2.94,1.02,0,">1 nonsynonymous","K128I P149E K199H",3
"lib1","SARS-CoV-2","ATTCCAGAGTACCCAG",1,7.89,10.83,0.06,0.19,2.93,1,0.02,"1 nonsynonymous","D59F",1
"lib1","SARS-CoV-2","ATTCCAGTGAACATCT",2,6.71,9.87,-0.89,0.3,2.57,1,0.01,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","ATTCCATAAACACCTA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","D34M A105* L162T C195D",4
"lib1","SARS-CoV-2","ATTCCATACAGCTTCA",4,29.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95S K132V F160R V173F",4
"lib1","SARS-CoV-2","ATTCCATACCATGCTA",1,11.68,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D59K F99I S139G N151A",4
"lib1","SARS-CoV-2","ATTCCATAGAATGTGT",1,34.53,6.53,-4.23,0.64,1.5,1.11,0.05,">1 nonsynonymous","C61K L122M P161M Q168G",4
"lib1","SARS-CoV-2","ATTCCATAGACCGCTT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","F12* A89G A105K V115S G155C",5
"lib1","SARS-CoV-2","ATTCCATATAGAACAA",1,10.99,9.77,-0.99,0.12,2.95,1,0.01,">1 nonsynonymous","K114L T170M",2
"lib1","SARS-CoV-2","ATTCCATCACCCACAA",2,20.68,6.92,-3.84,0.39,1.5,1.19,0.02,">1 nonsynonymous","P82H P149A",2
"lib1","SARS-CoV-2","ATTCCATCATTACAAT",2,20.82,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37F S43T C61D R124G N157F",5
"lib1","SARS-CoV-2","ATTCCATCCACCTGGT",10,101.83,8.11,-2.65,0.2,1.5,1.11,0.01,">1 nonsynonymous","V11S G83N N107S",3
"lib1","SARS-CoV-2","ATTCCATCCATACTCA",3,34.8,9.97,-0.79,0.06,2.4,1.03,0,">1 nonsynonymous","V37Y R127H",2
"lib1","SARS-CoV-2","ATTCCATTAACTTGAA",1,6.56,10.35,-0.42,0.13,2.63,1,0.01,">1 nonsynonymous","I104T E141V",2
"lib1","SARS-CoV-2","ATTCCATTATGATTCC",2,30.86,10.18,-0.59,0.08,2.8,1.04,0,">1 nonsynonymous","A81G V115L P133A",3
"lib1","SARS-CoV-2","ATTCCATTGCGAATAG",5,0.08,NA,NA,NA,NA,NA,NA,"stop","L5* D137V",2
"lib1","SARS-CoV-2","ATTCCCAAACGAACTT",6,86.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16S S43L E76R K87V Y91V A105I",6
"lib1","SARS-CoV-2","ATTCCCAACAGACTAT",5,24.08,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49M T55R N107K Y178W",4
"lib1","SARS-CoV-2","ATTCCCAACGAAATCG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","D68* I88T",2
"lib1","SARS-CoV-2","ATTCCCAATCAATCGA",11,181.13,10.79,0.02,0.05,2.92,1.04,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","ATTCCCAATTTATAGG",3,51.67,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V11N N24H Y50S R73T S139Q N171T",6
"lib1","SARS-CoV-2","ATTCCCACAGAGTTCT",6,58.43,9.7,-1.06,0.09,2.78,1.02,0,">1 nonsynonymous","D59R T85K K114T E154L",4
"lib1","SARS-CoV-2","ATTCCCACTTATCACT",9,116.4,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R27W Y35N G74P N171T",4
"lib1","SARS-CoV-2","ATTCCCAGACCCAATA",1,28.39,10.93,0.17,0.08,2.94,1.04,0,"1 nonsynonymous","L188A",1
"lib1","SARS-CoV-2","ATTCCCATAAGATTGA",9,101.34,10.78,0.02,0.08,2.89,1.05,0,">1 nonsynonymous","V173M S184T",2
"lib1","SARS-CoV-2","ATTCCCATAGTCCATT",3,37.73,10.39,-0.37,0.08,2.79,1.14,0,">1 nonsynonymous","P7A T46S Q84K",3
"lib1","SARS-CoV-2","ATTCCCATTATGAAAC",2,40.32,10.33,-0.43,0.06,2.97,1.01,0,">1 nonsynonymous","C6V L122K T140V V153A",4
"lib1","SARS-CoV-2","ATTCCCCAACTCATGC",1,25.32,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12D V20K L38G G83R P169T",5
"lib1","SARS-CoV-2","ATTCCCCCCGCGAGAA",9,226.23,10.26,-0.5,0.03,2.76,1.05,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","ATTCCCGGATAAAAAT",5,37.19,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K56C L95R A105D E135T G152N P177A P197S",7
"lib1","SARS-CoV-2","ATTCCCTCAAATATCA",6,0.81,NA,NA,NA,NA,NA,NA,"stop","K56G P96L Y121*",3
"lib1","SARS-CoV-2","ATTCCCTCTAACAGTG",3,92.77,10.7,-0.06,0.04,2.96,1.03,0,">1 nonsynonymous","L5A C61A",2
"lib1","SARS-CoV-2","ATTCCCTGATTGCCTT",2,42.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L N110W Q168C",3
"lib1","SARS-CoV-2","ATTCCCTGTCTTACAT",5,43.3,10.72,-0.05,0.06,2.94,1.03,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","ATTCCGACAATTTCTC",4,16.88,10.03,-0.74,0.11,2.53,1.05,0.01,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","ATTCCGACATTCAAAG",3,10.64,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N13F P96V C150T",3
"lib1","SARS-CoV-2","ATTCCGACGAATAACC",4,62.31,10.81,0.05,0.05,2.92,1.01,0,"1 nonsynonymous","N1M",1
"lib1","SARS-CoV-2","ATTCCGAGCCGTACCC",6,32.25,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5W T85P D137T G166I",4
"lib1","SARS-CoV-2","ATTCCGATCCCCTGAT",2,28.54,10.68,-0.08,0.09,2.91,1.05,0.01,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","ATTCCGATGTCCCTAA",1,21,10.03,-0.74,0.13,2.66,1.05,0.01,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","ATTCCGCAGAAGTAGG",6,2.1,NA,NA,NA,NA,NA,NA,"stop","C61* Q84* Q144S",3
"lib1","SARS-CoV-2","ATTCCGCGAGAGTAAC",5,106.28,6.1,-4.67,0.88,1.5,1.16,0.02,">1 nonsynonymous","L60T I88K Y123G P149L",4
"lib1","SARS-CoV-2","ATTCCGCGGAACCCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10G P96* L122V",3
"lib1","SARS-CoV-2","ATTCCGCTCAAATTAG",3,14.19,9.8,-0.96,0.24,1.71,1.09,0.03,">1 nonsynonymous","L5C F99Y E154N",3
"lib1","SARS-CoV-2","ATTCCGCTCCTAACAT",6,4.16,NA,NA,NA,NA,NA,NA,"stop","P96* S139M",2
"lib1","SARS-CoV-2","ATTCCGGTCTAACCAC",2,26.44,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Q84H S113T G146V V173R",4
"lib1","SARS-CoV-2","ATTCCGTAAAAAAGAG",1,71.27,10.81,0.04,0.09,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCCGTCAACTATAC",2,9.87,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","V182P",1
"lib1","SARS-CoV-2","ATTCCGTCACCCTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib1","SARS-CoV-2","ATTCCGTCCTTTGCTT",3,23.95,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","ATTCCGTCTTACAAAA",8,27.01,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50H R73P S113R",3
"lib1","SARS-CoV-2","ATTCCGTGAGTTAGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","ATTCCGTTACAAGCTA",7,1.46,NA,NA,NA,NA,NA,NA,"stop","Y39P Q84D V103R L131* G152N",5
"lib1","SARS-CoV-2","ATTCCGTTGATACGAA",3,46.44,10.5,-0.26,0.07,2.94,1.01,0,">1 nonsynonymous","S41T T170S",2
"lib1","SARS-CoV-2","ATTCCGTTGGTAGTTT",3,8.31,6,-4.76,1.42,1.5,1.02,0.03,"1 nonsynonymous","L95W",1
"lib1","SARS-CoV-2","ATTCCTAAACTAGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7V G51F I138* V173F",4
"lib1","SARS-CoV-2","ATTCCTAAATTAATTC",2,21.63,8.32,-2.45,0.19,2.06,1.18,0.02,">1 nonsynonymous","F12V G146K",2
"lib1","SARS-CoV-2","ATTCCTAACGGAGGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","F44V Y66T A81P G101F C150A G155* Y159T F185P",8
"lib1","SARS-CoV-2","ATTCCTAACTAGCACG",1,24.25,7.38,-3.38,0.36,1.5,1.23,0.04,">1 nonsynonymous","T100P I142V",2
"lib1","SARS-CoV-2","ATTCCTAACTCACAAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T3S G86N F126S N151*",4
"lib1","SARS-CoV-2","ATTCCTAAGGCACGTA",6,244.83,9.92,-0.84,0.04,2.77,1.04,0,">1 nonsynonymous","T55P D97C Q163R",3
"lib1","SARS-CoV-2","ATTCCTAATATACACC",2,22.59,10.79,0.03,0.06,2.97,1,0,"1 nonsynonymous","I2E",1
"lib1","SARS-CoV-2","ATTCCTAATCTAGTCG",3,16.23,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L95N K114A F134R V173G",4
"lib1","SARS-CoV-2","ATTCCTAATTATTCCA",3,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127V F160L",2
"lib1","SARS-CoV-2","ATTCCTACATCCAGCT",2,28.5,7.35,-3.42,0.23,1.5,1.13,0.01,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","ATTCCTAGAAATCATA",2,60.76,10.64,-0.13,0.07,2.83,1.14,0,"1 nonsynonymous","D97H",1
"lib1","SARS-CoV-2","ATTCCTAGAAGTAAAA",2,1.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTCCTATCGCCACAT",2,17.1,6,-4.76,1.24,1.86,1.15,0.01,">1 nonsynonymous","K94L N107H R136S A145L",4
"lib1","SARS-CoV-2","ATTCCTATGGACAATC",1,0.63,NA,NA,NA,NA,NA,NA,"stop","A89* D98Q C150N",3
"lib1","SARS-CoV-2","ATTCCTCAAAATTAAC",7,79.58,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F44P D59L A89R T100M Y119A P197R",6
"lib1","SARS-CoV-2","ATTCCTCAATCCGCTG",3,44.3,9.84,-0.93,0.1,2.03,1.02,0,">1 nonsynonymous","L5H Y91K E135D",3
"lib1","SARS-CoV-2","ATTCCTCCAGTACCAG",6,251.48,8.32,-2.44,0.13,2.21,1.11,0.01,">1 nonsynonymous","N24E C31V A42H Q176S",4
"lib1","SARS-CoV-2","ATTCCTCTAAGCTTGT",4,55.5,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A67I L95K T170C",3
"lib1","SARS-CoV-2","ATTCCTCTGTATGAAT",1,16.49,10.22,-0.55,0.16,2.86,1.04,0.01,">1 nonsynonymous","V37K G155W",2
"lib1","SARS-CoV-2","ATTCCTGAAATAAACG",2,27.46,6,-4.76,1.78,1.5,1.1,0.05,"1 nonsynonymous","Y123P",1
"lib1","SARS-CoV-2","ATTCCTGATCTATCGT",3,51.69,10.34,-0.43,0.08,2.92,1.02,0,"1 nonsynonymous","S36P",1
"lib1","SARS-CoV-2","ATTCCTGCAACAATGT",8,122.39,7.33,-3.44,0.25,1.5,1.21,0.02,">1 nonsynonymous","Y21L S139L Q163L",3
"lib1","SARS-CoV-2","ATTCCTGCCCATATTC",6,44.77,10.83,0.06,0.08,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTCCTGGCTCTTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","F47Y P133*",2
"lib1","SARS-CoV-2","ATTCCTGGTACCATGT",2,20.88,10.2,-0.56,0.08,2.94,1,0,">1 nonsynonymous","C61V P169N H189Q",3
"lib1","SARS-CoV-2","ATTCCTTAAAATATGA",9,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24A Y35W",2
"lib1","SARS-CoV-2","ATTCCTTAATACATAC",6,65.17,9.03,-1.73,0.2,1.56,1.17,0.02,">1 nonsynonymous","C6Q Y39N T46K",3
"lib1","SARS-CoV-2","ATTCCTTACATTGTTA",4,2.93,NA,NA,NA,NA,NA,NA,"stop","T15K V37* G74S D97E",4
"lib1","SARS-CoV-2","ATTCCTTAGCGGTACA",4,79.62,10.58,-0.18,0.06,2.92,1,0,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","ATTCCTTCAGATCATT",5,107.12,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8S V103E",2
"lib1","SARS-CoV-2","ATTCCTTGATAATGTC",3,16.53,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","Y21V C49T A89G",3
"lib1","SARS-CoV-2","ATTCCTTGCACCTTAT",1,20.21,10.37,-0.39,0.05,2.88,1,0,">1 nonsynonymous","T3S V37A D98Q T170S",4
"lib1","SARS-CoV-2","ATTCCTTTAATATTGG",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K G117C Y159G F185H",4
"lib1","SARS-CoV-2","ATTCCTTTGACGTGGG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","Y39* F44L S139D G152S",4
"lib1","SARS-CoV-2","ATTCCTTTGTCTAAGA",5,93.76,6.31,-4.45,0.35,1.5,1.15,0.01,">1 nonsynonymous","L95F E135S",2
"lib1","SARS-CoV-2","ATTCGAACAATAGTGT",1,39.31,10.69,-0.07,0.08,2.86,1.07,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","ATTCGAACATAGATAT",3,19.4,10.67,-0.1,0.06,2.94,1.02,0,"1 nonsynonymous","A33M",1
"lib1","SARS-CoV-2","ATTCGAACCATCCCAT",6,52.91,9.86,-0.91,0.06,2.92,1.02,0,">1 nonsynonymous","P7T S36M T63S T170S",4
"lib1","SARS-CoV-2","ATTCGAACCCCAATAG",2,9.72,6.08,-4.68,1.7,1.5,1.07,0,">1 nonsynonymous","F8N L57P L95N N109Y",4
"lib1","SARS-CoV-2","ATTCGAACTTTAATCG",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D F47C F70S W106R L131V",5
"lib1","SARS-CoV-2","ATTCGAAGAACATCAG",4,8.84,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","T3Q Q84E I104N Q176N",4
"lib1","SARS-CoV-2","ATTCGAAGACTAAAAG",2,14.17,10.76,0,0.12,2.88,1.03,0.01,"1 nonsynonymous","D97R",1
"lib1","SARS-CoV-2","ATTCGAATTAAAAAGC",2,1.19,NA,NA,NA,NA,NA,NA,"stop","G9V Y21W D68P A105H G174*",5
"lib1","SARS-CoV-2","ATTCGACAAACATGTG",10,144.14,10.74,-0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCGACAATGAATAT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","I2Y D68* Y91N C102G R124A A145E Q168D",7
"lib1","SARS-CoV-2","ATTCGACAGCACTATT",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M P149E",2
"lib1","SARS-CoV-2","ATTCGACATACCCGTA",4,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52K A105F L162Y V173L",4
"lib1","SARS-CoV-2","ATTCGACCGCTTTATA",7,53.31,6.34,-4.43,0.67,1.5,1.18,0.02,">1 nonsynonymous","I2T T55I K94E T100L",4
"lib1","SARS-CoV-2","ATTCGACTCAAGAATT",5,49.99,8.82,-1.94,0.32,1.5,1,0.07,">1 nonsynonymous","K56F K94P T170M",3
"lib1","SARS-CoV-2","ATTCGACTTAACTCTA",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V A42N S129N G146C T170S",5
"lib1","SARS-CoV-2","ATTCGAGAAAGCATAA",12,28.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D90S C102Q V115F T201S",4
"lib1","SARS-CoV-2","ATTCGAGAATACTAAA",5,2.64,NA,NA,NA,NA,NA,NA,"stop","R27* Y50P Y143K",3
"lib1","SARS-CoV-2","ATTCGAGCATACTAAG",1,12.12,6.62,-4.15,0.4,1.5,1.08,0.03,">1 nonsynonymous","A42R C158I K199E",3
"lib1","SARS-CoV-2","ATTCGAGCGACTATTG",1,31.41,10.73,-0.04,0.07,2.91,1.04,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","ATTCGAGGTATAGACG",1,46.85,10.77,0.01,0.1,2.81,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCGAGTACATACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S29P D68* I72* N107D F167V",5
"lib1","SARS-CoV-2","ATTCGATACACATTAA",3,0.78,NA,NA,NA,NA,NA,NA,"stop","N1I I142L N151S Y178* K198E",5
"lib1","SARS-CoV-2","ATTCGATATAATATAT",7,64.24,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F62S I88D Q144T F160R",4
"lib1","SARS-CoV-2","ATTCGATATTACCAGT",3,34.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40L Y66E A81E D137K N157A",5
"lib1","SARS-CoV-2","ATTCGATTAGGACGGT",1,26.62,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F62N R73S N107D Y119V",4
"lib1","SARS-CoV-2","ATTCGATTGAATATCA",3,30.88,9.9,-0.87,0.18,2.39,1,0.02,">1 nonsynonymous","A33L G83I N151M",3
"lib1","SARS-CoV-2","ATTCGCAAGTTAGACT",7,145.89,10.67,-0.1,0.04,2.92,1.04,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","ATTCGCACGAAGGACT",6,40.31,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","S19V N109M",2
"lib1","SARS-CoV-2","ATTCGCATAATCTCGA",3,36.99,10.67,-0.09,0.06,2.96,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTCGCATAGCTAGGC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","A14* C31N Q84K L131W T201N",5
"lib1","SARS-CoV-2","ATTCGCTCATACTTGT",3,35.93,10.45,-0.31,0.08,3,1,0,"1 nonsynonymous","G116F",1
"lib1","SARS-CoV-2","ATTCGCTGATTCCAGA",3,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I R124E",2
"lib1","SARS-CoV-2","ATTCGCTTAACGACGT",3,38.96,6,-4.76,2,3,1.09,0,"1 nonsynonymous","Y93R",1
"lib1","SARS-CoV-2","ATTCGCTTTCTTCCGT",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R E141G P149M P169S S184L",5
"lib1","SARS-CoV-2","ATTCGGAACTTCAACT",9,86.32,8.4,-2.37,0.22,1.5,1.07,0.02,">1 nonsynonymous","L5Q A33W A42T C49Q",4
"lib1","SARS-CoV-2","ATTCGGAATCACATAC",7,76.91,10.68,-0.09,0.08,2.89,1.09,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","ATTCGGACACATATCT",5,30.24,7.1,-3.66,0.42,1.5,1.09,0.04,">1 nonsynonymous","A81S D112M",2
"lib1","SARS-CoV-2","ATTCGGACAGCCGCTT",3,40.28,10.69,-0.07,0.04,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTCGGAGGACTAACA",6,26.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51N F99M V103D N120H S139W",5
"lib1","SARS-CoV-2","ATTCGGAGGGCAGAAA",1,0.75,NA,NA,NA,NA,NA,NA,"stop","E10L K26L D59A D68K Q84* V103F N120E Q144K G166Q",9
"lib1","SARS-CoV-2","ATTCGGATCTACAACA",3,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P D112V T170K",3
"lib1","SARS-CoV-2","ATTCGGATTAAGGATC",3,13.7,6,-4.76,2,1.5,1.33,0.04,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","ATTCGGATTGTGACAG",1,6,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A14K V52L Q84Y N107I Y143L P149H",6
"lib1","SARS-CoV-2","ATTCGGCCGGTACATG",10,2.48,NA,NA,NA,NA,NA,NA,"stop","G9A S41P Y121* P161L",4
"lib1","SARS-CoV-2","ATTCGGCCTAATATTG",5,45.97,10.66,-0.1,0.06,2.86,1.04,0,">1 nonsynonymous","L5T S43T N120S A190C P197S",5
"lib1","SARS-CoV-2","ATTCGGCTACTACTCC",3,35.55,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S45H G101T E154N",3
"lib1","SARS-CoV-2","ATTCGGCTCCATCCAT",1,26.45,8.61,-2.16,0.25,1.5,1.06,0.03,">1 nonsynonymous","D34R F44S L57K Y121L",4
"lib1","SARS-CoV-2","ATTCGGCTCCCAATCG",5,60.12,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V37I T63G A81C I104G N120I",5
"lib1","SARS-CoV-2","ATTCGGCTCGACTTAT",3,16.72,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","Y50N D90N F99I",3
"lib1","SARS-CoV-2","ATTCGGGAAACTGGAT",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A V20L N107C F156Q",4
"lib1","SARS-CoV-2","ATTCGGGAAATACAAC",5,1.58,NA,NA,NA,NA,NA,NA,"stop","T63N N171* T201G",3
"lib1","SARS-CoV-2","ATTCGGGACATGATTC",9,5.66,NA,NA,NA,NA,NA,NA,"stop","C49* K94F",2
"lib1","SARS-CoV-2","ATTCGGGAGTGTAATG",6,126.36,7.97,-2.79,0.19,2.1,1.15,0.01,"1 nonsynonymous","N171K",1
"lib1","SARS-CoV-2","ATTCGGTGAACACCAG",5,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T G117V",2
"lib1","SARS-CoV-2","ATTCGTAAACAAAGTT",1,37.92,6,-4.76,1.42,1.5,1.21,0.03,">1 nonsynonymous","V37L N92D I138W G166N",4
"lib1","SARS-CoV-2","ATTCGTAACTGACATC",3,10.18,10.52,-0.24,0.16,2.93,1.03,0.01,">1 nonsynonymous","K114L T148V",2
"lib1","SARS-CoV-2","ATTCGTACAGCCCCAT",10,101.84,7.43,-3.33,0.24,1.5,1.11,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","ATTCGTACGGTACTCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib1","SARS-CoV-2","ATTCGTATCAAACAAC",1,16.22,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F47L V77H T100V C158R",4
"lib1","SARS-CoV-2","ATTCGTATTCCTATCT",3,16.47,10.83,0.07,0.07,2.9,1.05,0,">1 nonsynonymous","N30S T201L",2
"lib1","SARS-CoV-2","ATTCGTCATTTCCCCG",2,8,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","C6L V20M A81V",3
"lib1","SARS-CoV-2","ATTCGTCCCAAAAGAT",2,21.61,10.72,-0.04,0.05,2.87,1.06,0,">1 nonsynonymous","N1G I104Y",2
"lib1","SARS-CoV-2","ATTCGTCCTTGAAATA",7,17.47,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F8L F17I C49L Y91L",4
"lib1","SARS-CoV-2","ATTCGTCGACTGTACC",7,34.19,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","L183S",1
"lib1","SARS-CoV-2","ATTCGTGATAAATAAT",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D A89H N107L",3
"lib1","SARS-CoV-2","ATTCGTGCCATTATGA",3,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N Y35V V103N P197Y",4
"lib1","SARS-CoV-2","ATTCGTTACTTGTAAC",5,97.01,10.55,-0.21,0.04,2.92,1.02,0,">1 nonsynonymous","Y35F F156P K198C",3
"lib1","SARS-CoV-2","ATTCGTTATCATAAGG",2,29.12,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","N64E Y93C A105G",3
"lib1","SARS-CoV-2","ATTCGTTTGATTCGTA",4,155.51,10.87,0.1,0.07,2.91,1.05,0,"1 nonsynonymous","P197Q",1
"lib1","SARS-CoV-2","ATTCGTTTTCACAGCA",6,97.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N40M G146T Q176V",3
"lib1","SARS-CoV-2","ATTCTAAAAATCTACA",1,7.61,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","A67F V103G G146L",3
"lib1","SARS-CoV-2","ATTCTAAAAATTTTGC",4,5.1,8.23,-2.54,0.36,2.11,1.07,0.04,">1 nonsynonymous","A42N V65K K132E Q144L T201L",5
"lib1","SARS-CoV-2","ATTCTAAAATTAAAAA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F44G C49* K94Y L162W",4
"lib1","SARS-CoV-2","ATTCTAAACTTGAATC",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D97A N120R P149S",4
"lib1","SARS-CoV-2","ATTCTAAAGCTCAAGT",4,105.15,10.19,-0.58,0.09,2.44,1.01,0,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","ATTCTAAATGAGTTGG",2,25.83,6.08,-4.69,0.79,1.5,1.15,0.01,">1 nonsynonymous","L60P G116K P161L",3
"lib1","SARS-CoV-2","ATTCTAACCTTAGTCT",10,2.18,NA,NA,NA,NA,NA,NA,"stop","P7K Y21*",2
"lib1","SARS-CoV-2","ATTCTAACGGGAATTA",3,68.65,10.87,0.1,0.08,2.97,1,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","ATTCTAACTACATACA",4,11.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6D W106S V181E",3
"lib1","SARS-CoV-2","ATTCTAAGACCATCAA",2,44.95,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P133L P161T",2
"lib1","SARS-CoV-2","ATTCTAAGGGCCCCCC",5,95.27,10.76,0,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCTAAGTAATAATT",1,23.62,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S36D Y66D G86S Q176R",4
"lib1","SARS-CoV-2","ATTCTAATGAAATACG",1,79.85,10.73,-0.03,0.05,2.92,1.06,0,">1 nonsynonymous","T100F N120R",2
"lib1","SARS-CoV-2","ATTCTACAAGTAGATC",6,50.82,10.76,-0.01,0.06,2.92,1.05,0,"1 nonsynonymous","P7N",1
"lib1","SARS-CoV-2","ATTCTACACATCCACT",1,49.17,10.2,-0.56,0.09,2.72,1,0,">1 nonsynonymous","G9D A42D L57Y T63H",4
"lib1","SARS-CoV-2","ATTCTACATACCCTAA",7,31.04,6,-4.76,2,3,1.2,0,">1 nonsynonymous","G51I G146V G152L Y159L",4
"lib1","SARS-CoV-2","ATTCTACATAGGTACG",1,106.61,10.67,-0.09,0.03,2.96,1.02,0,"1 nonsynonymous","F8I",1
"lib1","SARS-CoV-2","ATTCTACCCATTGAAA",1,17.23,10.58,-0.19,0.07,2.76,1.1,0,"1 nonsynonymous","T15N",1
"lib1","SARS-CoV-2","ATTCTACCGCACAGAT",6,33.54,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","Y50N D59Y I72A V77T G86E",5
"lib1","SARS-CoV-2","ATTCTACGACATGTGG",4,22.89,6.79,-3.98,0.18,1.5,1.07,0.01,">1 nonsynonymous","F8N K26M G51K T148L",4
"lib1","SARS-CoV-2","ATTCTAGACTACGATA",4,6.62,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D90N Y119S L162P V173P",4
"lib1","SARS-CoV-2","ATTCTAGATATCCCTA",4,54.46,8.65,-2.12,0.13,1.88,1.1,0.01,">1 nonsynonymous","C31H F47Y F156W",3
"lib1","SARS-CoV-2","ATTCTAGCAAATAATG",3,2147.21,7.5,-3.26,0.11,1.5,1.12,0,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ATTCTAGTCCTTAAAA",4,57.83,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9V N58M V71P A190L",4
"lib1","SARS-CoV-2","ATTCTAGTGACCCACC",6,0.41,NA,NA,NA,NA,NA,NA,"stop","N4Q D98V S147* F185M",4
"lib1","SARS-CoV-2","ATTCTATAAGCCTTTA",1,137.49,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37N T55G N58D N157R P177R",5
"lib1","SARS-CoV-2","ATTCTATACTACCCGA",5,24.83,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","R25Q D137Y Y165P",3
"lib1","SARS-CoV-2","ATTCTATATAGAGACC",2,39.97,6,-4.76,1.78,1.5,1.21,0.04,">1 nonsynonymous","I88A N107K H189R",3
"lib1","SARS-CoV-2","ATTCTATATGGGGAGT",16,221.51,10.79,0.02,0.07,2.88,1.07,0,">1 nonsynonymous","R16I T201P",2
"lib1","SARS-CoV-2","ATTCTATGTAAAATAA",3,40.55,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C6E Y35V I142D T201K",4
"lib1","SARS-CoV-2","ATTCTATTAGGAATGC",9,76.79,6.97,-3.8,0.2,1.5,1.14,0.01,">1 nonsynonymous","Y39S A89L",2
"lib1","SARS-CoV-2","ATTCTATTATACGAGG",1,24.12,10.51,-0.25,0.13,2.9,1.02,0.01,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","ATTCTATTCACAAAAA",2,68.28,10.75,-0.02,0.06,2.95,1.01,0,">1 nonsynonymous","G9T S36D",2
"lib1","SARS-CoV-2","ATTCTATTCATGAGTG",11,147.18,9.64,-1.12,0.05,2.88,1.06,0,">1 nonsynonymous","C6D C61R L125Q",3
"lib1","SARS-CoV-2","ATTCTATTTCTAACAA",4,50.01,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","P7E N24E T100P F126A",4
"lib1","SARS-CoV-2","ATTCTCAAAACAACAA",2,100.58,9.92,-0.85,0.04,2.79,1.02,0,">1 nonsynonymous","L60G S147I P169S",3
"lib1","SARS-CoV-2","ATTCTCAAACAAATTA",4,28.67,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G51E L57C G152P F156W",4
"lib1","SARS-CoV-2","ATTCTCAAACTTTGGA",6,46.62,10.64,-0.12,0.08,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTCTCACCACATATT",1,1.16,NA,NA,NA,NA,NA,NA,"stop","Y91I P133* P149L",3
"lib1","SARS-CoV-2","ATTCTCACTGTGAAAT",1,16.53,9.64,-1.13,0.26,1.65,1.12,0.02,">1 nonsynonymous","W23S L60I",2
"lib1","SARS-CoV-2","ATTCTCAGTTAATATG",2,21.14,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5A P82A S113R Q168L P177K",5
"lib1","SARS-CoV-2","ATTCTCATAACAATGG",4,139.43,10.82,0.06,0.06,2.96,1.02,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","ATTCTCATATGCTAAG",1,7.87,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F8R K48T L57C Y91L",4
"lib1","SARS-CoV-2","ATTCTCATCCTAGTCA",1,38.75,10.77,0,0.07,2.87,1.07,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","ATTCTCCAAACATGCG",2,12.67,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C6A R124F",2
"lib1","SARS-CoV-2","ATTCTCCAATCTTCCA",5,0.3,NA,NA,NA,NA,NA,NA,"stop","Y35S A42H I88* W106H I138K",5
"lib1","SARS-CoV-2","ATTCTCCACCTGACAT",2,8.5,7.69,-3.07,0.49,2.75,1.02,0.08,">1 nonsynonymous","N157R F167L",2
"lib1","SARS-CoV-2","ATTCTCCCAGAAATGA",3,4.52,NA,NA,NA,NA,NA,NA,"stop","P7H L38Q L125*",3
"lib1","SARS-CoV-2","ATTCTCCCAGTCTGCA",3,14.07,11.07,0.31,0.1,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCTCCGCAACTACC",8,35.68,10.08,-0.69,0.11,1.96,1.04,0,">1 nonsynonymous","C6Y T15K A22R D34I",4
"lib1","SARS-CoV-2","ATTCTCCGCCCGGTAC",3,45.72,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G9R F17E S41H C158L G166T",5
"lib1","SARS-CoV-2","ATTCTCCGTCCGAGGA",5,75.12,10.71,-0.06,0.04,2.97,1,0,">1 nonsynonymous","N40D D90S",2
"lib1","SARS-CoV-2","ATTCTCCTAAAAAAAT",4,52.37,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6R R25M Y35V G51T I88L C102M R124P F134A",8
"lib1","SARS-CoV-2","ATTCTCCTTGACTATG",1,5.73,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R16I C61E F99S K114W",4
"lib1","SARS-CoV-2","ATTCTCGCCGCACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* I88C R136F P177L",4
"lib1","SARS-CoV-2","ATTCTCTAAACATCGG",2,26.74,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4P V20W G155S G174T T201Q",5
"lib1","SARS-CoV-2","ATTCTCTATTACCATG",3,89.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D68E N107Y Y165N",3
"lib1","SARS-CoV-2","ATTCTCTCAGACACAT",6,0.28,NA,NA,NA,NA,NA,NA,"stop","S69* Y91R T201A",3
"lib1","SARS-CoV-2","ATTCTCTTGAAGGTAA",5,61.14,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y39G T85L A105D",3
"lib1","SARS-CoV-2","ATTCTCTTTAACGTAA",5,9.86,7.13,-3.63,0.42,1.5,1.27,0.03,">1 nonsynonymous","A89H P96R G117N L162N P197K",5
"lib1","SARS-CoV-2","ATTCTGAAACAATCAA",3,29.29,6.78,-3.98,0.43,1.5,1.16,0.02,"1 nonsynonymous","I72Q",1
"lib1","SARS-CoV-2","ATTCTGAAGAATGAAA",1,42.02,10.72,-0.05,0.04,2.93,1.05,0,"1 nonsynonymous","A42P",1
"lib1","SARS-CoV-2","ATTCTGAAGCGCTGTA",2,53.89,10.24,-0.53,0.07,2.75,1.05,0,">1 nonsynonymous","T55C V103I",2
"lib1","SARS-CoV-2","ATTCTGAGATATCAAA",1,59.23,9.73,-1.03,0.11,1.95,1.15,0,">1 nonsynonymous","T3S L38V P133H",3
"lib1","SARS-CoV-2","ATTCTGATGATTTTAA",7,71.14,6.06,-4.71,1.08,1.5,1.16,0.03,">1 nonsynonymous","Y91G G146I",2
"lib1","SARS-CoV-2","ATTCTGATTACACTGA",1,117.03,8.12,-2.65,0.13,2.36,1.09,0.01,">1 nonsynonymous","G74E Y119L",2
"lib1","SARS-CoV-2","ATTCTGCATGACGACG",8,49.7,9.86,-0.9,0.12,2.17,1.03,0.01,"1 nonsynonymous","L38C",1
"lib1","SARS-CoV-2","ATTCTGCGGAAATTCA",3,63.07,10.42,-0.34,0.04,2.88,1.04,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","ATTCTGGAATGCAAAT",19,189.04,8.52,-2.24,0.2,1.5,1.1,0.02,">1 nonsynonymous","F8V A89Y H189D",3
"lib1","SARS-CoV-2","ATTCTGGGTGTCACCT",5,30.69,6.36,-4.41,0.59,1.73,1.11,0.02,">1 nonsynonymous","C49K D90C E154C",3
"lib1","SARS-CoV-2","ATTCTGTATAACGCGC",1,1.93,NA,NA,NA,NA,NA,NA,"stop","V32* L57T L122P",3
"lib1","SARS-CoV-2","ATTCTGTATTGGTACG",1,27.99,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","I88G G101L N151T C158K",4
"lib1","SARS-CoV-2","ATTCTGTCTGGTCTAC",4,23.87,6.31,-4.46,0.89,1.5,1.29,0.05,">1 nonsynonymous","K48F Q84L F134L",3
"lib1","SARS-CoV-2","ATTCTTAAAATATCAG",6,55.95,6.18,-4.58,0.66,1.5,1.18,0.02,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","ATTCTTAAACGTCAAA",1,38.45,10.62,-0.14,0.05,2.95,1,0,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","ATTCTTAAAGAATAAG",2,2.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","ATTCTTAATAATTACA",5,0.64,NA,NA,NA,NA,NA,NA,"stop","C61* K132P",2
"lib1","SARS-CoV-2","ATTCTTAATACCAAGT",7,37.07,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","S36R K87R C102P",3
"lib1","SARS-CoV-2","ATTCTTAATATCTGCC",9,117.14,10.65,-0.12,0.03,2.93,1.01,0,">1 nonsynonymous","L5Y L38F T100F",3
"lib1","SARS-CoV-2","ATTCTTAATCTATACA",8,2.29,NA,NA,NA,NA,NA,NA,"stop","R127* T148R P161S",3
"lib1","SARS-CoV-2","ATTCTTACAACTAACG",4,4.77,NA,NA,NA,NA,NA,NA,"stop","Y39* I88H W106D L125* V153N",5
"lib1","SARS-CoV-2","ATTCTTACGCCGTTCA",2,24.43,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","E10Y F47I P54T G101V S113M",5
"lib1","SARS-CoV-2","ATTCTTACTAATCACT",5,16.48,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","F12N K26Q I104N",3
"lib1","SARS-CoV-2","ATTCTTAGGCCTCAAT",4,26.9,9.73,-1.04,0.28,1.5,1,0.04,">1 nonsynonymous","T55S D137M",2
"lib1","SARS-CoV-2","ATTCTTAGTAAATGGA",3,49.42,9.47,-1.29,0.18,2.28,1.15,0.01,">1 nonsynonymous","F47T K56R C61N Q144D Q163R",5
"lib1","SARS-CoV-2","ATTCTTAGTAGACGAC",5,34.19,10.32,-0.45,0.07,2.81,1.07,0,">1 nonsynonymous","D34C D90N A190V",3
"lib1","SARS-CoV-2","ATTCTTATAACTGTCG",4,8.73,NA,NA,NA,NA,NA,NA,"stop","Y66* N92Y N107I I138R",4
"lib1","SARS-CoV-2","ATTCTTATGAGATTGT",8,140.86,10.69,-0.08,0.05,2.95,1.04,0,">1 nonsynonymous","S43I S113A K132L",3
"lib1","SARS-CoV-2","ATTCTTATGCAACAGT",3,62.87,9.96,-0.8,0.14,2.15,1.04,0.01,">1 nonsynonymous","C31K F44L",2
"lib1","SARS-CoV-2","ATTCTTCAAGGTCCGT",8,161.47,9.66,-1.1,0.04,2.85,1.09,0,">1 nonsynonymous","T15S S53E F62W Y119S",4
"lib1","SARS-CoV-2","ATTCTTCACTTGGAGT",2,18.6,10.85,0.08,0.11,2.83,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCTTCAGCCCCACA",5,3.57,NA,NA,NA,NA,NA,NA,"stop","R16L G83* Q168P",3
"lib1","SARS-CoV-2","ATTCTTCATCCAAGCT",1,16.52,8.05,-2.72,0.18,1.81,1.16,0.01,">1 nonsynonymous","D97L L131V S139I F160I",4
"lib1","SARS-CoV-2","ATTCTTCCGAGGCGAA",1,7.67,10.33,-0.44,0.03,2.98,1,0,"1 nonsynonymous","S19A",1
"lib1","SARS-CoV-2","ATTCTTCCTAGATTTT",3,1.04,NA,NA,NA,NA,NA,NA,"stop","V115I Y121W P149R T201*",4
"lib1","SARS-CoV-2","ATTCTTCCTGAAAGAT",16,2.78,NA,NA,NA,NA,NA,NA,"stop","F44Y K56* D68I G83K L122T G152A",6
"lib1","SARS-CoV-2","ATTCTTCGCAAATAAA",5,121.39,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I2A V37R G86N Y121V",4
"lib1","SARS-CoV-2","ATTCTTCGCTCTCAGA",7,97.65,10.78,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTCTTCTACAAAGAA",3,43.21,10.8,0.04,0.04,2.94,1.05,0,">1 nonsynonymous","T3A S139T",2
"lib1","SARS-CoV-2","ATTCTTGACCCCCACG",1,22.32,10.65,-0.12,0.05,2.99,1.03,0,">1 nonsynonymous","A33S K199I",2
"lib1","SARS-CoV-2","ATTCTTGACGTGGCAT",4,69.8,6.92,-3.84,0.44,1.5,1.17,0.04,"1 nonsynonymous","R179S",1
"lib1","SARS-CoV-2","ATTCTTGAGAAATGAG",3,48.29,9.49,-1.28,0.14,1.9,1.07,0.01,">1 nonsynonymous","R16N L57V Y91H",3
"lib1","SARS-CoV-2","ATTCTTGCGACTTAGA",2,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G T46A T100Y A105D T170P F185N",6
"lib1","SARS-CoV-2","ATTCTTGGAAAAGAAG",4,1.27,NA,NA,NA,NA,NA,NA,"stop","N1H L5S F12R S19* K87Y N107L G116N S129C I138K K198V",10
"lib1","SARS-CoV-2","ATTCTTTACATACCCG",7,124.75,8.45,-2.32,0.16,2.5,1.04,0.01,">1 nonsynonymous","E141L Y159F T170K",3
"lib1","SARS-CoV-2","ATTCTTTACTTTAAGC",5,24.08,6.83,-3.93,0.38,1.5,1.14,0.01,">1 nonsynonymous","A105K N171I",2
"lib1","SARS-CoV-2","ATTCTTTATCAGCAGC",4,58.41,10.78,0.02,0.06,2.98,1,0,">1 nonsynonymous","Y35F L57H",2
"lib1","SARS-CoV-2","ATTCTTTCCTTACCAT",3,20.9,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","T55D K94Q N107L D112R",4
"lib1","SARS-CoV-2","ATTCTTTCTAACTGTT",7,74.21,6.83,-3.94,0.21,1.5,1.13,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","ATTCTTTCTTATACTG",5,18.88,6.8,-3.97,0.41,1.5,1.02,0.03,">1 nonsynonymous","S45G T100S R179Y",3
"lib1","SARS-CoV-2","ATTCTTTGGAGAAGTA",2,61.25,10.12,-0.65,0.11,2.43,1.01,0.01,">1 nonsynonymous","L5V P96Q",2
"lib1","SARS-CoV-2","ATTCTTTTTAATACGT",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S T55V N118Y K128F F167K",5
"lib1","SARS-CoV-2","ATTGAAAAAAAATAGA",4,9.85,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1G F8S D68K",3
"lib1","SARS-CoV-2","ATTGAAAAAAACAACT",4,19.44,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","E10L S41I K94T P149Y N157C",5
"lib1","SARS-CoV-2","ATTGAAAAATCCACGG",5,33.17,10.19,-0.58,0.05,2.95,1,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","ATTGAAAACATTATAT",1,13.17,9.98,-0.79,0.13,1.97,1.05,0.01,">1 nonsynonymous","Y91R S184F",2
"lib1","SARS-CoV-2","ATTGAAAATAATTCTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V D34M S41N N110L",4
"lib1","SARS-CoV-2","ATTGAAACCCACCGAT",3,37.57,9.77,-1,0.06,2.97,1.01,0,">1 nonsynonymous","V37W Y119N",2
"lib1","SARS-CoV-2","ATTGAAACTGCGGATT",1,6.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N Y91V N107L Q176S",4
"lib1","SARS-CoV-2","ATTGAAACTGTAAAAG",6,40.33,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F17I Y165L G174R",3
"lib1","SARS-CoV-2","ATTGAAAGTAATCTGG",1,21.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5F N30I V77A N107C",4
"lib1","SARS-CoV-2","ATTGAAATACATTATT",1,6.92,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5I A42L N107L G152N V181Y K198L",6
"lib1","SARS-CoV-2","ATTGAAATATGGATTA",8,57.69,10.64,-0.12,0.04,2.92,1.01,0,">1 nonsynonymous","N24S A89S",2
"lib1","SARS-CoV-2","ATTGAAATGACCTCCG",2,34.34,9.99,-0.78,0.16,1.76,1.03,0.01,">1 nonsynonymous","N1D S29M A81T",3
"lib1","SARS-CoV-2","ATTGAAATGACGGTCT",4,68.37,7.04,-3.72,0.33,1.59,1.21,0.02,">1 nonsynonymous","G9Q Y143F N157I",3
"lib1","SARS-CoV-2","ATTGAAATGGGAAAAG",7,39.02,6.21,-4.56,0.5,1.94,1.18,0.01,">1 nonsynonymous","D112H S164Y A192S",3
"lib1","SARS-CoV-2","ATTGAACAACTCTTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R L60S Y91G S113M F167W",5
"lib1","SARS-CoV-2","ATTGAACAATCTCAAT",1,1.35,NA,NA,NA,NA,NA,NA,"stop","N4* T15L T85P D90K L162S Q168E",6
"lib1","SARS-CoV-2","ATTGAACACCCAACCA",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R S41H P133A C150A C158A",5
"lib1","SARS-CoV-2","ATTGAACAGGAAACAT",6,20.34,6,-4.76,1.24,1.5,1.17,0.01,">1 nonsynonymous","S45C C49R D59I K128F",4
"lib1","SARS-CoV-2","ATTGAACATAGAGGGA",8,105.35,10.75,-0.02,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGAACCAACATATT",4,60.8,10.64,-0.12,0.04,2.89,1.03,0,">1 nonsynonymous","A14S P149R",2
"lib1","SARS-CoV-2","ATTGAACCAGTCTAAT",3,75.56,8.39,-2.37,0.13,2.49,1.15,0.01,">1 nonsynonymous","N64W N157L",2
"lib1","SARS-CoV-2","ATTGAACCCTACCGTG",1,41.49,8.37,-2.39,0.16,2.6,1.04,0.01,"1 nonsynonymous","Y175V",1
"lib1","SARS-CoV-2","ATTGAACCTTTTTTAC",2,7.72,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C102Y S113C N120I",3
"lib1","SARS-CoV-2","ATTGAACGAACCCGCA",2,17.39,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","T46A V103G",2
"lib1","SARS-CoV-2","ATTGAACTATAAAGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50D D75* I80K",3
"lib1","SARS-CoV-2","ATTGAACTCTCTCGAC",3,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M F167V",2
"lib1","SARS-CoV-2","ATTGAAGAAAGGCGCG",1,24.77,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F47N D90Y T148A Y165R",4
"lib1","SARS-CoV-2","ATTGAAGAAATCAATC",1,27.64,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I2E D90F Y119R G146V Y175R",5
"lib1","SARS-CoV-2","ATTGAAGAACCGCGAG",5,0.72,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","ATTGAAGACGGTTAAT",3,73.64,10.57,-0.19,0.05,2.9,1.02,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","ATTGAAGACTTGAGTA",4,30.03,10.49,-0.28,0.1,2.87,1.09,0,">1 nonsynonymous","V37C G83Q",2
"lib1","SARS-CoV-2","ATTGAAGAGGACACAA",2,0.73,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","ATTGAAGATTTAAACA",8,93.35,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10A K56F C102D N110Q L125M Q176R",6
"lib1","SARS-CoV-2","ATTGAAGCTCACTTAT",3,31.06,10.28,-0.49,0.06,2.96,1,0,">1 nonsynonymous","P149I P169T",2
"lib1","SARS-CoV-2","ATTGAAGCTCCGAGAA",3,44.84,6,-4.76,1.69,1.5,1.15,0.02,">1 nonsynonymous","V32L I104M Y121Q P161T K198G",5
"lib1","SARS-CoV-2","ATTGAAGGCAATATTA",5,122.02,10.79,0.02,0.06,2.9,1.03,0,"1 nonsynonymous","P197K",1
"lib1","SARS-CoV-2","ATTGAAGTTATCGCCG",9,115.95,10.78,0.02,0.07,2.9,1.07,0,">1 nonsynonymous","G9Y T63S L122A",3
"lib1","SARS-CoV-2","ATTGAAGTTCTAACAA",6,110.01,9.21,-1.55,0.05,2.88,1.06,0,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","ATTGAAGTTCTAGCCC",3,0.98,NA,NA,NA,NA,NA,NA,"stop","A22V A89* T148S T201C",4
"lib1","SARS-CoV-2","ATTGAATAAACACATG",6,22.07,10.24,-0.52,0.08,2.48,1.04,0,">1 nonsynonymous","T3V A14R V37M D97F T148S",5
"lib1","SARS-CoV-2","ATTGAATACAAGGTAA",2,21.93,9.4,-1.37,0.11,2.31,1.08,0.01,">1 nonsynonymous","N107K N130F",2
"lib1","SARS-CoV-2","ATTGAATAGCACAGCT",8,59.97,10.15,-0.62,0.06,2.86,1,0,"1 nonsynonymous","C31K",1
"lib1","SARS-CoV-2","ATTGAATATTAAAGAA",10,35.47,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C6W G51S F134V E154D",4
"lib1","SARS-CoV-2","ATTGAATCAGAACTAG",2,8.3,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","C6Y G117R V181A K198S",4
"lib1","SARS-CoV-2","ATTGAATCCACCATTG",2,43.74,10.69,-0.07,0.09,2.9,1.08,0,"1 nonsynonymous","K26R",1
"lib1","SARS-CoV-2","ATTGAATGCCCATAAA",8,43.59,9.36,-1.4,0.1,1.54,1.13,0,">1 nonsynonymous","K56R N64P W106R V173N H189N",5
"lib1","SARS-CoV-2","ATTGAATGCTAAAGAA",1,16.45,9.21,-1.55,0.16,2.34,1.17,0.02,"1 nonsynonymous","A145N",1
"lib1","SARS-CoV-2","ATTGAATGTAATTAGG",2,21.2,10.32,-0.45,0.1,2.86,1,0.01,">1 nonsynonymous","T63I D97L F160T",3
"lib1","SARS-CoV-2","ATTGAATTAGCAATAT",3,61.47,10.15,-0.61,0.06,2.86,1.01,0,">1 nonsynonymous","S43R G83C P169M",3
"lib1","SARS-CoV-2","ATTGACAAAAACCCGG",8,74.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V G166R",2
"lib1","SARS-CoV-2","ATTGACAAAATATAGC",3,86.93,9.52,-1.24,0.09,2.78,1.13,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","ATTGACAAAGAAAGAG",2,23.09,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N4S V37M K94I F99P",4
"lib1","SARS-CoV-2","ATTGACAACGAGCAGG",8,76.87,10.67,-0.09,0.03,2.94,1,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","ATTGACAATGAAGTGC",4,19.2,6.37,-4.4,0.66,1.5,1.27,0.04,">1 nonsynonymous","K56P P96R",2
"lib1","SARS-CoV-2","ATTGACAATGTAAAAC",1,17.62,8.9,-1.86,0.21,1.85,1.15,0.03,">1 nonsynonymous","D112V E141S",2
"lib1","SARS-CoV-2","ATTGACACAACACATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F99N Y143M",3
"lib1","SARS-CoV-2","ATTGACACCAACAAAA",4,121.79,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K56F T63S S113V Q176V",4
"lib1","SARS-CoV-2","ATTGACACGACTGACG",1,20.68,8.74,-2.03,0.17,1.69,1.2,0.01,">1 nonsynonymous","C6G D59W D90M",3
"lib1","SARS-CoV-2","ATTGACACTTATATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T V77E Y123A I138S",4
"lib1","SARS-CoV-2","ATTGACAGCCTATGCC",1,21.4,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","Y35N C61L D90Q N107I",4
"lib1","SARS-CoV-2","ATTGACATCTTTAGCT",4,129.88,10.47,-0.29,0.03,2.9,1.06,0,"1 nonsynonymous","Y123R",1
"lib1","SARS-CoV-2","ATTGACCACTAAAGAG",1,32.28,10.72,-0.04,0.08,2.96,1.01,0,">1 nonsynonymous","G9E N58M",2
"lib1","SARS-CoV-2","ATTGACCACTCGAATT",5,18.2,7.22,-3.54,0.3,1.78,1.07,0.01,">1 nonsynonymous","V103T P133L T140R G172Q S200A",5
"lib1","SARS-CoV-2","ATTGACCAGCATTGGC",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63H Y93F N118C F160R",4
"lib1","SARS-CoV-2","ATTGACCCAGGGTATA",8,61.97,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","N64V G83A K94R Y178D",4
"lib1","SARS-CoV-2","ATTGACGAACGCACGC",8,40.41,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","I2C V11I N30I Y50S K56S Y93K Y121S G152C P197S",9
"lib1","SARS-CoV-2","ATTGACGCATACCTTT",1,22.4,10.74,-0.03,0.1,2.88,1.07,0,">1 nonsynonymous","G9M V173L",2
"lib1","SARS-CoV-2","ATTGACGGCTCATCCA",5,56.47,8.76,-2,0.14,2.2,1.11,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","ATTGACGTTGATACGG",1,19.97,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6L P54H N109H C150I Y178H",5
"lib1","SARS-CoV-2","ATTGACTAACCCGAAG",1,39.04,10.78,0.02,0.06,2.99,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGACTGGCATATTC",6,492.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6I G51P F99V E154C V173C E186S",6
"lib1","SARS-CoV-2","ATTGAGAAGGATACCA",2,5.41,10.03,-0.74,0.51,1.62,1,0.05,">1 nonsynonymous","C49S T85R",2
"lib1","SARS-CoV-2","ATTGAGACGTCCGCGT",1,5.98,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","N1Y D98K G116V S139I Q176R",5
"lib1","SARS-CoV-2","ATTGAGAGACCAGAGT",3,25.49,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R73Q I88R",2
"lib1","SARS-CoV-2","ATTGAGAGCAAGACGC",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101L R124S T201L",3
"lib1","SARS-CoV-2","ATTGAGAGTTAATTGC",4,111.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N118D G146P V153D Q168A",4
"lib1","SARS-CoV-2","ATTGAGATACAGGACT",2,0,NA,NA,NA,NA,NA,NA,"stop","T63D D98* P149Y",3
"lib1","SARS-CoV-2","ATTGAGATACCTTATG",1,18.77,10.72,-0.05,0.1,2.9,1.08,0,"1 nonsynonymous","N110G",1
"lib1","SARS-CoV-2","ATTGAGATGCGTTGTT",2,45.17,10.51,-0.25,0.04,2.93,1.02,0,">1 nonsynonymous","I2L G9L P149S",3
"lib1","SARS-CoV-2","ATTGAGATTGCCGACG",13,59.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y50R F62L Y121S",3
"lib1","SARS-CoV-2","ATTGAGCAAATTCACT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","T100M R127*",2
"lib1","SARS-CoV-2","ATTGAGCACAATTGAT",1,11.65,6,-4.76,1.95,3,1.22,0.02,">1 nonsynonymous","A22E Q176P",2
"lib1","SARS-CoV-2","ATTGAGCCAATTAAAA",10,18.69,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37F V103D",2
"lib1","SARS-CoV-2","ATTGAGCCACAGAACT",1,37.43,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S69L L95H L122V G146N K198N",5
"lib1","SARS-CoV-2","ATTGAGCCGAAGTAGT",4,56.58,10.74,-0.03,0.1,2.93,1,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","ATTGAGCCGAATCCCA",6,67.61,10.56,-0.2,0.07,2.87,1.1,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","ATTGAGCGCTTTAAAC",3,33.54,10.3,-0.46,0.06,2.67,1.03,0,"1 nonsynonymous","S19G",1
"lib1","SARS-CoV-2","ATTGAGCTGGGGTTTA",3,36.89,10.16,-0.6,0.18,2.18,1.05,0.02,">1 nonsynonymous","D34L A42V",2
"lib1","SARS-CoV-2","ATTGAGGACCCTCCGA",6,50.04,10.84,0.08,0.07,2.97,1,0,">1 nonsynonymous","L122R F160L",2
"lib1","SARS-CoV-2","ATTGAGGACCGGTGGG",1,18.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A67T D90V",2
"lib1","SARS-CoV-2","ATTGAGGAGATATACT",3,1.5,NA,NA,NA,NA,NA,NA,"stop","T55* Q84F N151T",3
"lib1","SARS-CoV-2","ATTGAGGAGTCGTACT",5,5.16,NA,NA,NA,NA,NA,NA,"stop","Q84W A89* I104G T201M",4
"lib1","SARS-CoV-2","ATTGAGGGCAAGCCTT",4,56.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L38T I72R Y159A",3
"lib1","SARS-CoV-2","ATTGAGGGCCCTTACG",5,38.28,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Q84V F99C V153F",3
"lib1","SARS-CoV-2","ATTGAGTAACACCCAC",3,7.15,6,-4.76,2,1.5,1.14,0.05,"1 nonsynonymous","Y93G",1
"lib1","SARS-CoV-2","ATTGAGTAATATTGGC",2,53.67,10.02,-0.74,0.09,2.72,1.07,0,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","ATTGAGTACCTTAACA",2,32.84,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V32M N92R G172S",3
"lib1","SARS-CoV-2","ATTGAGTTATAATAGC",3,15.81,6,-4.76,2,3,1.17,0,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","ATTGATAAAACTGGAA",6,45.55,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D68G E141W N157W",3
"lib1","SARS-CoV-2","ATTGATAAAAGACAAC",1,11.02,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","W106M F134P P197W T201M",4
"lib1","SARS-CoV-2","ATTGATAAAATGATTA",3,22.06,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P7H F70N K128A R136F V182P",5
"lib1","SARS-CoV-2","ATTGATAAACAATCGG",3,28.53,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y50S R78F Y91L V153Y",4
"lib1","SARS-CoV-2","ATTGATAAGTCATAAT",3,116.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35E G51A N92M K114L Y143G",5
"lib1","SARS-CoV-2","ATTGATAATAAGTCGT",7,35.33,6.26,-4.5,0.34,1.5,1.07,0.01,">1 nonsynonymous","I28L C49S W106R P149C",4
"lib1","SARS-CoV-2","ATTGATAATTACTCCG",3,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47K D97P G101S E154V",4
"lib1","SARS-CoV-2","ATTGATACCCCCCCCA",5,2.37,NA,NA,NA,NA,NA,NA,"stop","T15M I28* F126L",3
"lib1","SARS-CoV-2","ATTGATACGTAAACAA",3,52.82,10.6,-0.17,0.1,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGATAGATTCACCT",5,1.66,NA,NA,NA,NA,NA,NA,"stop","P133* C150S N157V",3
"lib1","SARS-CoV-2","ATTGATAGCGCCTACG",1,33.59,10.9,0.14,0.09,2.96,1,0,">1 nonsynonymous","A42R F62T P149A",3
"lib1","SARS-CoV-2","ATTGATAGTTACAAAC",4,50.99,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V65R G83D F99V N107V Q144S P197W",6
"lib1","SARS-CoV-2","ATTGATAGTTTAGGTG",5,83.66,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44M E76P",2
"lib1","SARS-CoV-2","ATTGATATACACCAAC",3,32.16,10.85,0.08,0.14,2.89,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTGATATACTCCAGC",5,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y T148L V181P",3
"lib1","SARS-CoV-2","ATTGATATCTCACTAG",3,13.35,10.18,-0.58,0.09,2.96,1,0,">1 nonsynonymous","T63G S129L",2
"lib1","SARS-CoV-2","ATTGATATTACAACCA",2,11.62,8.55,-2.22,0.44,2.55,1.4,0.07,"1 nonsynonymous","S113H",1
"lib1","SARS-CoV-2","ATTGATATTGAGTCCA",8,162.83,9.26,-1.51,0.06,2.74,1.15,0,">1 nonsynonymous","T100Q Y119P P149H",3
"lib1","SARS-CoV-2","ATTGATATTGATTGTA",3,18.49,6.76,-4.01,0.46,1.5,1.08,0.03,">1 nonsynonymous","S29R D90I D112Q V173C K199I",5
"lib1","SARS-CoV-2","ATTGATCAACTAACGG",5,40.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7N P82S K94I T148I",4
"lib1","SARS-CoV-2","ATTGATCACACAACCG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","T15S F44S N107* L122V T170R S200G",6
"lib1","SARS-CoV-2","ATTGATCAGGCGTGGC",1,19.88,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","P161F",1
"lib1","SARS-CoV-2","ATTGATCCCAGTCGCA",3,62.01,9.16,-1.61,0.22,1.67,1.21,0.02,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","ATTGATCCCGGCCACA",2,1.51,NA,NA,NA,NA,NA,NA,"stop","C61L N92* S139C P149Q",4
"lib1","SARS-CoV-2","ATTGATCCGAACTTTT",5,31.15,6,-4.76,2,3,1.06,0,">1 nonsynonymous","C6F R25L D68E K87D",4
"lib1","SARS-CoV-2","ATTGATCCGCGTCTCT",3,26.29,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S19I N40K Q168F",3
"lib1","SARS-CoV-2","ATTGATCGCAAATGCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S45A T100P N107T N130I G152*",5
"lib1","SARS-CoV-2","ATTGATCTAAACTCGG",1,0.87,NA,NA,NA,NA,NA,NA,"stop","T15A Y50* Y119R",3
"lib1","SARS-CoV-2","ATTGATCTGATTGGCC",1,20.81,6,-4.76,2,3,1.03,0,">1 nonsynonymous","D90G T140Y P161I",3
"lib1","SARS-CoV-2","ATTGATGAAGCTGCCT",1,30.88,6,-4.76,1.51,3,1.22,0.01,">1 nonsynonymous","I28K T100L T148L N157F",4
"lib1","SARS-CoV-2","ATTGATGAGATTAACC",2,14.92,10.22,-0.54,0.08,2.93,1,0,"1 nonsynonymous","Q144W",1
"lib1","SARS-CoV-2","ATTGATGATAGCCCTC",5,56.58,10.58,-0.18,0.06,2.94,1.03,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","ATTGATGATCTCAAGC",11,82.13,6.21,-4.56,0.48,1.5,1.18,0.01,">1 nonsynonymous","G86C L122K Y175S",3
"lib1","SARS-CoV-2","ATTGATGATGAAGACT",1,44.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A81R Q144P G166E G172S",4
"lib1","SARS-CoV-2","ATTGATGCAGACAGGT",8,68.63,6.36,-4.4,0.5,1.5,1.15,0.02,">1 nonsynonymous","C61T I88W Y165H",3
"lib1","SARS-CoV-2","ATTGATGGTAATCACG",4,15.94,7.75,-3.01,0.33,1.5,1.2,0.02,">1 nonsynonymous","C61P N109Q S139F",3
"lib1","SARS-CoV-2","ATTGATGTGTAAGTAG",6,29.26,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25P T100A",2
"lib1","SARS-CoV-2","ATTGATTAATAGCATT",1,4.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175D",1
"lib1","SARS-CoV-2","ATTGATTCAGCCGCGT",6,79.33,10.06,-0.7,0.09,2.28,1.02,0,">1 nonsynonymous","V32Y G51R N58D Q84L",4
"lib1","SARS-CoV-2","ATTGATTCATCATAAG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","T15S T55P E141I E186V T201*",5
"lib1","SARS-CoV-2","ATTGATTCATTGCATT",5,46.82,8.72,-2.05,0.24,1.5,1.17,0.02,">1 nonsynonymous","S43W Q84R Y91T T148K",4
"lib1","SARS-CoV-2","ATTGATTGGATTGTCT",2,73.64,10.15,-0.62,0.05,2.67,1.06,0,">1 nonsynonymous","K26W L60V L111I",3
"lib1","SARS-CoV-2","ATTGATTGGCCAAAAA",3,13.42,10.24,-0.52,0.05,3,1,0,">1 nonsynonymous","R16N F62G C195F",3
"lib1","SARS-CoV-2","ATTGATTTAAGTCGGA",12,81.76,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","L95Q Y121P",2
"lib1","SARS-CoV-2","ATTGATTTAGCGTCTC",3,46.28,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T63M I88Y L95R C150M G172V K198Y",6
"lib1","SARS-CoV-2","ATTGATTTCCCATAAC",3,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53W I104N",2
"lib1","SARS-CoV-2","ATTGCAAACAGAGTTA",6,92.48,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37D K48L A89S N118T S139Y",5
"lib1","SARS-CoV-2","ATTGCAAACGATGTGC",2,24,10.81,0.05,0.13,2.88,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTGCAAATCGAATTA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","L5* G117L",2
"lib1","SARS-CoV-2","ATTGCAACCAGTAGAT",2,24.23,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G74S K94M L122V S129N N157P G174V",6
"lib1","SARS-CoV-2","ATTGCAACGGACGTAC",2,216.92,8.26,-2.5,0.12,2.44,1.08,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","ATTGCAACGTTCTACA",4,97.95,10.74,-0.02,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGCAAGACTGTTAG",1,9.25,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S43T Y121Q R136N G152V Y165S",5
"lib1","SARS-CoV-2","ATTGCAAGATCTTGTA",3,11.76,6,-4.76,2,1.5,1.19,0.04,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","ATTGCAAGGACACCCG",3,15.86,10.11,-0.66,0.11,2.83,1.11,0.01,">1 nonsynonymous","I72V N118H T201K",3
"lib1","SARS-CoV-2","ATTGCAAGTTTCACTA",5,113.58,10.64,-0.12,0.07,2.86,1.08,0,">1 nonsynonymous","K56G G83L",2
"lib1","SARS-CoV-2","ATTGCAATAAGAATGG",7,170.04,8.7,-2.07,0.16,1.68,1.14,0.01,">1 nonsynonymous","V32T K56Q G116Y R136E",4
"lib1","SARS-CoV-2","ATTGCAATCGAACAAG",9,171.91,10.11,-0.66,0.05,2.91,1.02,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","ATTGCAATTACACTAA",6,39.58,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15N A22F S45H K128D P177K K199D",6
"lib1","SARS-CoV-2","ATTGCACAAGATCACT",5,24.02,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2D Y91E P96T Y178H",4
"lib1","SARS-CoV-2","ATTGCACAGCACAATA",2,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y C102R",2
"lib1","SARS-CoV-2","ATTGCACAGTAAACAA",2,17.34,7.98,-2.79,0.31,1.5,1.12,0.04,">1 nonsynonymous","Y91M R127L",2
"lib1","SARS-CoV-2","ATTGCACATTAAACAA",5,91.09,10.18,-0.59,0.06,2.75,1.01,0,">1 nonsynonymous","N58K R136I",2
"lib1","SARS-CoV-2","ATTGCACCAAGAAGAC",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K E76Y G83T V115C",4
"lib1","SARS-CoV-2","ATTGCACCCCACTACT",4,34.97,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K87L V182G",2
"lib1","SARS-CoV-2","ATTGCACCGCTAGCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","L95F Y123S S129R F160S V181L T201*",6
"lib1","SARS-CoV-2","ATTGCACTCACAGCTA",4,70.26,10.23,-0.53,0.08,2.51,1,0,">1 nonsynonymous","K56H R78C Y123L N130R E186S",5
"lib1","SARS-CoV-2","ATTGCAGCGGCACAGA",4,20.5,10.18,-0.58,0.34,1.57,1.03,0.05,">1 nonsynonymous","S41G I88T",2
"lib1","SARS-CoV-2","ATTGCAGGGGCAAGCT",2,65.45,10.63,-0.13,0.05,2.92,1.01,0,"1 nonsynonymous","I138G",1
"lib1","SARS-CoV-2","ATTGCATAAATCCCAA",1,15.81,8.47,-2.29,0.14,2.78,1.06,0.01,">1 nonsynonymous","S45G D59Y K114P T201R",4
"lib1","SARS-CoV-2","ATTGCATAGCCAAAGG",4,129.33,6,-4.76,1.49,1.5,1.16,0.01,">1 nonsynonymous","C6K G86W F99A S113A P177V",5
"lib1","SARS-CoV-2","ATTGCATATTAAGCTG",9,133.29,9.1,-1.66,0.15,1.69,1.14,0.01,">1 nonsynonymous","K26A L38T",2
"lib1","SARS-CoV-2","ATTGCATATTATCAGG",12,75.77,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N4G Y35L T55S P82K G101I S184I",6
"lib1","SARS-CoV-2","ATTGCATCAAATTTAC",2,47.19,10.74,-0.02,0.08,2.87,1.06,0,"1 nonsynonymous","T140Y",1
"lib1","SARS-CoV-2","ATTGCATCCAACTCCC",8,128.75,10.11,-0.66,0.06,2.85,1.05,0,">1 nonsynonymous","K87R G116W K132G",3
"lib1","SARS-CoV-2","ATTGCATGATAAAAGC",1,8,6,-4.76,2,3,1.05,0,">1 nonsynonymous","L38W D98S K114I R127E E135K",5
"lib1","SARS-CoV-2","ATTGCATTAACAAACA",3,33.52,10.25,-0.52,0.09,2.76,1.04,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","ATTGCATTATCCCGAA",8,24.05,9.08,-1.68,0.26,1.5,1.15,0.03,">1 nonsynonymous","A18L S139L T201V",3
"lib1","SARS-CoV-2","ATTGCCAACACCAAAA",1,24.5,8.25,-2.51,0.11,1.86,1.09,0,">1 nonsynonymous","C61F S108M",2
"lib1","SARS-CoV-2","ATTGCCAATATGTATC",14,86.9,6.12,-4.64,0.63,1.5,1.19,0.01,">1 nonsynonymous","T46I K56F L162G T201M",4
"lib1","SARS-CoV-2","ATTGCCAATATTAACA",1,0.95,NA,NA,NA,NA,NA,NA,"stop","Q84V K198* T201L",3
"lib1","SARS-CoV-2","ATTGCCACGCCTAACA",5,71.49,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D112Y N118T F134I",3
"lib1","SARS-CoV-2","ATTGCCACGCTGCATC",2,19.07,6,-4.76,2,1.5,1.17,0.07,">1 nonsynonymous","C6R C49G S113F",3
"lib1","SARS-CoV-2","ATTGCCAGCGTTCATC",5,69.88,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F44L L57C G83D I104M",4
"lib1","SARS-CoV-2","ATTGCCATACCCTCCC",4,44.7,6,-4.76,0.93,1.5,1.17,0.01,">1 nonsynonymous","F12I L38Q Y93S N107I",4
"lib1","SARS-CoV-2","ATTGCCATGAACTGCA",2,22.49,6.55,-4.21,0.36,1.5,1.09,0.01,">1 nonsynonymous","F99I E135A V182H",3
"lib1","SARS-CoV-2","ATTGCCATGTATTAAA",2,5.21,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14P L38Y V77K D97S",4
"lib1","SARS-CoV-2","ATTGCCCACAAACCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15N G51D L95T L131* Q163G",5
"lib1","SARS-CoV-2","ATTGCCCGCAAAAATA",2,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S D90G N107V R124V G174L",5
"lib1","SARS-CoV-2","ATTGCCCTGAGACACC",5,61.32,7.28,-3.48,0.3,1.5,1.12,0.03,">1 nonsynonymous","C31V P133R S184V",3
"lib1","SARS-CoV-2","ATTGCCGATAAATAAT",1,26.87,8.73,-2.03,0.28,1.67,1.13,0.03,">1 nonsynonymous","A14N C31I T85F K114A",4
"lib1","SARS-CoV-2","ATTGCCGGACACAAAT",2,23.73,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K114T R127S V181A T201K",4
"lib1","SARS-CoV-2","ATTGCCTAGAAAATCT",5,199.93,10.64,-0.12,0.04,2.87,1.04,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","ATTGCCTCGAGGACAT",1,36.38,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T55K P82W Y119T F134W G166Y",5
"lib1","SARS-CoV-2","ATTGCGAAGGAACACC",8,19.3,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","ATTGCGAATAAAGATA",4,88.78,10.84,0.08,0.06,2.94,1.03,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","ATTGCGAATATAATAC",7,159.11,10.04,-0.72,0.09,2.28,1,0,">1 nonsynonymous","Y50F W106M",2
"lib1","SARS-CoV-2","ATTGCGAATGAAACGC",4,0.08,NA,NA,NA,NA,NA,NA,"stop","V71* Q163S",2
"lib1","SARS-CoV-2","ATTGCGACCTTAATAT",3,14.9,9.12,-1.64,0.28,1.78,1.05,0.04,">1 nonsynonymous","T15Q G83V F134W A145S",4
"lib1","SARS-CoV-2","ATTGCGAGAAATTGCC",5,0.84,NA,NA,NA,NA,NA,NA,"stop","N4* G86M Y143R",3
"lib1","SARS-CoV-2","ATTGCGCACATTACTT",5,64.52,9.75,-1.02,0.11,2.01,1.1,0,">1 nonsynonymous","R27T L57A N120Y",3
"lib1","SARS-CoV-2","ATTGCGCCAACCTATA",3,19.17,6.77,-3.99,0.52,1.5,1.14,0.05,">1 nonsynonymous","Y66P S113G T201S",3
"lib1","SARS-CoV-2","ATTGCGCTGGAATTGT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","E10* N40D W106R N118P Q144P",5
"lib1","SARS-CoV-2","ATTGCGCTTAAGGTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* T201L",2
"lib1","SARS-CoV-2","ATTGCGCTTTATACCA",7,27.17,9.16,-1.61,0.15,1.85,1.11,0.01,">1 nonsynonymous","L5F A33V F62R N120Q F134T",5
"lib1","SARS-CoV-2","ATTGCGGCACATAGTC",1,6.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34N L57T R136L G155I",4
"lib1","SARS-CoV-2","ATTGCGGCATTAAAGC",3,34.6,6,-4.76,1.09,3,1.14,0,">1 nonsynonymous","V20R S113R F160A",3
"lib1","SARS-CoV-2","ATTGCGGCCAACTCGT",5,17.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S53L Y121E Q168R L183S",4
"lib1","SARS-CoV-2","ATTGCGGGACCTTAAT",2,52.52,9.58,-1.18,0.12,2.17,1.06,0.01,">1 nonsynonymous","D90S Q144L",2
"lib1","SARS-CoV-2","ATTGCGGTGTCCGCAG",3,29.14,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6S A89L N120T",3
"lib1","SARS-CoV-2","ATTGCGTAAATCAGGC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","P96* W106D Y143L",3
"lib1","SARS-CoV-2","ATTGCGTACTACAAAA",4,39.81,10.4,-0.37,0.07,2.88,1.06,0,">1 nonsynonymous","K26L F126L",2
"lib1","SARS-CoV-2","ATTGCGTACTATTTGT",1,38.53,10.28,-0.48,0.06,2.84,1.02,0.01,">1 nonsynonymous","N120L S184M",2
"lib1","SARS-CoV-2","ATTGCGTTCAGAATAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N24* I142L",2
"lib1","SARS-CoV-2","ATTGCGTTGGTAATAC",5,4.59,NA,NA,NA,NA,NA,NA,"stop","D34A L111*",2
"lib1","SARS-CoV-2","ATTGCTAAAAATAAAG",8,46.37,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V32R N92K S200R",3
"lib1","SARS-CoV-2","ATTGCTAACATATCCA",3,24.43,9.37,-1.39,0.11,2.81,1.11,0.01,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","ATTGCTAACGTGCTAG",5,0.21,NA,NA,NA,NA,NA,NA,"stop","N58C V71* I104T S139R",4
"lib1","SARS-CoV-2","ATTGCTAAGGAACCCA",1,28.67,10.45,-0.31,0.08,2.88,1.03,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","ATTGCTAATTATACAT",3,18.53,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6D T15L V37I Y66I N107H Y159W",6
"lib1","SARS-CoV-2","ATTGCTACCTTACGCA",3,48.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N130F G172K",2
"lib1","SARS-CoV-2","ATTGCTACTAAAAAGC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTGCTAGACAATCAT",3,10.21,8.56,-2.2,0.21,1.5,1,0.02,">1 nonsynonymous","I88T S139D G152I",3
"lib1","SARS-CoV-2","ATTGCTAGACCAACTA",2,38.26,9.11,-1.66,0.22,1.55,1.17,0.02,">1 nonsynonymous","F62N Q163P",2
"lib1","SARS-CoV-2","ATTGCTATCCGGTTTT",7,0.59,NA,NA,NA,NA,NA,NA,"stop","A81K D90* T100H",3
"lib1","SARS-CoV-2","ATTGCTATCGATGCAA",4,43.56,10.16,-0.61,0.12,2.78,1.02,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","ATTGCTATTACGTAAA",7,67.05,10.79,0.03,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGCTCACTAAAAAA",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Q I88S P177V",3
"lib1","SARS-CoV-2","ATTGCTCACTTTTGGT",7,0.03,NA,NA,NA,NA,NA,NA,"stop","V65* Y123E",2
"lib1","SARS-CoV-2","ATTGCTCAGCGCGAAT",3,23.93,6.09,-4.68,0.69,1.5,1.24,0.01,">1 nonsynonymous","C150L K198R",2
"lib1","SARS-CoV-2","ATTGCTCCAACAATCC",2,59.52,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N24A L131D",2
"lib1","SARS-CoV-2","ATTGCTCCAAGTTTAG",10,82.58,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16C P161K",2
"lib1","SARS-CoV-2","ATTGCTCGCAATAAAA",6,85.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y93L A105N L122A C150E",4
"lib1","SARS-CoV-2","ATTGCTCGCACCTGAA",1,49.93,7.41,-3.35,0.26,1.5,1.12,0.02,">1 nonsynonymous","P54L D98N F156K Y178G",4
"lib1","SARS-CoV-2","ATTGCTCGCTTATAAA",7,80.66,9.78,-0.98,0.1,1.79,1.11,0,">1 nonsynonymous","I28R V37E",2
"lib1","SARS-CoV-2","ATTGCTGAATACTAAA",4,2.1,NA,NA,NA,NA,NA,NA,"stop","P82* D90S N110I Y119A K132*",5
"lib1","SARS-CoV-2","ATTGCTGCGCTAACTG",2,18.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G74R K94C",2
"lib1","SARS-CoV-2","ATTGCTGGGAATCATG",5,0,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","ATTGCTGGTTTAGGCA",2,1.12,NA,NA,NA,NA,NA,NA,"stop","T15R I88M Y121L E141*",4
"lib1","SARS-CoV-2","ATTGCTTACATAAAGA",1,13.35,6,-4.76,2,3,1.27,0.02,">1 nonsynonymous","T63E Y91G I104F C158Q",4
"lib1","SARS-CoV-2","ATTGCTTCATATATTA",7,38.01,10.75,-0.01,0.04,2.9,1.03,0,">1 nonsynonymous","L5F C61L",2
"lib1","SARS-CoV-2","ATTGCTTCTATGTCAA",5,9.62,6.12,-4.65,1.62,3,1.17,0,">1 nonsynonymous","I104S G117W V181C",3
"lib1","SARS-CoV-2","ATTGGAAAAAATGAAT",10,1.02,NA,NA,NA,NA,NA,NA,"stop","C6* N58F N107* P149S",4
"lib1","SARS-CoV-2","ATTGGAAAATGAAATA",3,73.39,10.69,-0.07,0.06,2.95,1.04,0,">1 nonsynonymous","G116H P197A",2
"lib1","SARS-CoV-2","ATTGGAAACGGAGGAG",12,134.89,10.67,-0.09,0.05,2.91,1.05,0,"1 nonsynonymous","G51Q",1
"lib1","SARS-CoV-2","ATTGGAACCAGATGTC",2,65.51,10.38,-0.39,0.04,2.94,1.03,0,"1 nonsynonymous","P169I",1
"lib1","SARS-CoV-2","ATTGGAACTCAGCGGG",5,44.01,10.77,0.01,0.07,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTGGAAGAGATAAAA",4,2.97,NA,NA,NA,NA,NA,NA,"stop","S19W F44* G155E",3
"lib1","SARS-CoV-2","ATTGGAAGATACTGAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7* C31F K114T",3
"lib1","SARS-CoV-2","ATTGGAAGTTGCCCTG",4,52.1,10.79,0.02,0.09,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGAATACGCAAGC",1,9.65,10.82,0.06,0.19,2.88,1.03,0.02,">1 nonsynonymous","S41T S129R L188T",3
"lib1","SARS-CoV-2","ATTGGAATCGTGGAGA",4,67.51,10.87,0.1,0.07,2.88,1.05,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","ATTGGAATCTATAAAT",2,13.99,6,-4.76,2,3,1.18,0,"1 nonsynonymous","I80K",1
"lib1","SARS-CoV-2","ATTGGACAACGCACAC",2,5.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F47S",1
"lib1","SARS-CoV-2","ATTGGACACAAAAATC",1,13.03,8.37,-2.4,0.37,1.94,1.26,0.05,">1 nonsynonymous","S45V G166L",2
"lib1","SARS-CoV-2","ATTGGACGATAGAACG",1,49.93,10.18,-0.58,0.08,2.56,1,0,">1 nonsynonymous","D90H K128M",2
"lib1","SARS-CoV-2","ATTGGACTCTCTCGAA",2,48.28,10.53,-0.24,0.05,2.9,1.02,0,">1 nonsynonymous","I104Y P133S",2
"lib1","SARS-CoV-2","ATTGGACTCTTACAAT",2,37.75,8.84,-1.93,0.38,1.5,1,0.08,">1 nonsynonymous","N1P P7W T55N N107V",4
"lib1","SARS-CoV-2","ATTGGACTTACCGCGC",1,9.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13H L95H A105V T201K",4
"lib1","SARS-CoV-2","ATTGGAGCTATCATGA",4,5.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M G51Y I138F T170M",4
"lib1","SARS-CoV-2","ATTGGAGGTATTTGTT",3,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N F44T V103L D112S R136I F185T",6
"lib1","SARS-CoV-2","ATTGGATAACTCAGTG",1,2.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","ATTGGATAAGTGTAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A14T D97E N109M",4
"lib1","SARS-CoV-2","ATTGGATCAAGTGGTG",3,28.03,9.41,-1.35,0.25,1.65,1.03,0.04,">1 nonsynonymous","R16Y A89H Q144P",3
"lib1","SARS-CoV-2","ATTGGATGCAAATACA",2,60.9,8.24,-2.52,0.2,1.91,1.15,0.01,">1 nonsynonymous","D98E Y175V",2
"lib1","SARS-CoV-2","ATTGGCAAAAAACCTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib1","SARS-CoV-2","ATTGGCAAAACCGTAA",8,248.02,10.36,-0.4,0.02,2.89,1.02,0,">1 nonsynonymous","D75L P149A",2
"lib1","SARS-CoV-2","ATTGGCAAAGGAAGAT",2,30.63,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","S113F G172C",2
"lib1","SARS-CoV-2","ATTGGCAAAGTCACAG",3,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89F W106E",2
"lib1","SARS-CoV-2","ATTGGCAATTGCACAG",2,12.97,6.35,-4.42,0.71,1.5,1.22,0.06,">1 nonsynonymous","Y93N S113F E141V S200T",4
"lib1","SARS-CoV-2","ATTGGCACCCTAGATA",9,2.54,NA,NA,NA,NA,NA,NA,"stop","V103* G116A S129A C158F",4
"lib1","SARS-CoV-2","ATTGGCAGAATCTAGC",9,38.33,8.37,-2.4,0.12,2.83,1.06,0.01,">1 nonsynonymous","F126E T140S",2
"lib1","SARS-CoV-2","ATTGGCATATACCAAA",1,28.87,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G9N I28R C61I F99C",4
"lib1","SARS-CoV-2","ATTGGCCCTTACAGAT",3,9.95,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F44T C158L",2
"lib1","SARS-CoV-2","ATTGGCCTTTTTACCA",2,46.8,9.23,-1.54,0.09,2.84,1.14,0,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","ATTGGCGACACTGTTA",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78L G116L K128F",3
"lib1","SARS-CoV-2","ATTGGCGATACTCGAT",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N D112F R127W S147T",4
"lib1","SARS-CoV-2","ATTGGCGCTACTTCTA",1,44.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86C K87T G155C",3
"lib1","SARS-CoV-2","ATTGGCGCTTCATAAG",2,15.28,7.49,-3.27,0.19,1.78,1.12,0.01,">1 nonsynonymous","G9W R16K Y93V F156I",4
"lib1","SARS-CoV-2","ATTGGCGGCCAGATCT",5,21.91,8.95,-1.82,0.28,1.5,1.14,0.05,"1 nonsynonymous","D137T",1
"lib1","SARS-CoV-2","ATTGGCTAGGCAAATC",2,0.62,NA,NA,NA,NA,NA,NA,"stop","S36M G174*",2
"lib1","SARS-CoV-2","ATTGGCTATATAGACT",2,33.79,10.76,0,0.06,2.95,1.01,0,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","ATTGGCTGATAGTCCA",2,68.23,8.28,-2.48,0.12,1.81,1.11,0.01,">1 nonsynonymous","N4C T100L G172S",3
"lib1","SARS-CoV-2","ATTGGGAACTATAAAA",4,166.7,10.38,-0.38,0.03,2.86,1.04,0,">1 nonsynonymous","K128P S139G S147V L188F",4
"lib1","SARS-CoV-2","ATTGGGAAGTTTGACT",2,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R I88L",2
"lib1","SARS-CoV-2","ATTGGGACGTAAGCAA",7,87.61,7.89,-2.88,0.18,2.21,1.15,0.01,">1 nonsynonymous","C158S T201V",2
"lib1","SARS-CoV-2","ATTGGGAGAGAGCTGC",1,20.41,9.66,-1.11,0.27,1.92,1.26,0.02,">1 nonsynonymous","N13F E141W",2
"lib1","SARS-CoV-2","ATTGGGAGCCAGTACA",1,3.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGGATCCCTGAAT",6,51.51,7.35,-3.42,0.21,1.5,1.15,0.01,">1 nonsynonymous","W23L N151L",2
"lib1","SARS-CoV-2","ATTGGGCAAGAAATGT",1,19.62,10.65,-0.11,0.05,2.88,1.05,0,">1 nonsynonymous","F134N T201N",2
"lib1","SARS-CoV-2","ATTGGGCACAGTGTAA",3,1.3,NA,NA,NA,NA,NA,NA,"stop","P54V G86C L131* C158W",4
"lib1","SARS-CoV-2","ATTGGGCACCAAAATG",1,45.4,10.8,0.04,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGGCCCTTGACGC",2,34,10.82,0.05,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGGCGAAATTATT",5,89.68,9.71,-1.06,0.05,2.78,1.09,0,">1 nonsynonymous","L5I K87G Y91L N130R",4
"lib1","SARS-CoV-2","ATTGGGCGGCCCTATG",2,44.17,10.68,-0.08,0.07,2.96,1.03,0,"1 nonsynonymous","D59A",1
"lib1","SARS-CoV-2","ATTGGGCTGATTGGGA",2,84.91,10.67,-0.1,0.07,2.84,1.09,0,">1 nonsynonymous","T3Q V173L",2
"lib1","SARS-CoV-2","ATTGGGGACAATTGAC",3,46.07,10.1,-0.67,0.07,2.85,1,0,">1 nonsynonymous","C6A T55S",2
"lib1","SARS-CoV-2","ATTGGGGTATCAATAA",2,29.21,10.75,-0.01,0.05,2.97,1.03,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","ATTGGGTATCGAATAG",9,64.67,6,-4.76,0.69,2.37,1.2,0.01,">1 nonsynonymous","F8C S41Q V180F",3
"lib1","SARS-CoV-2","ATTGGGTTAAAATTTA",9,103.7,9.47,-1.29,0.11,2.43,1.13,0,">1 nonsynonymous","Y121M G152T",2
"lib1","SARS-CoV-2","ATTGGTAAAAGTAAGC",4,69.98,10.75,-0.01,0.06,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGTAAAATACCCG",1,23.67,9.8,-0.96,0.11,2.48,1.03,0,">1 nonsynonymous","L60G N107C",2
"lib1","SARS-CoV-2","ATTGGTAAGAATTTTA",5,34.87,10.16,-0.6,0.05,2.91,1.09,0,">1 nonsynonymous","V37T T140R G174E",3
"lib1","SARS-CoV-2","ATTGGTACGAGTATAA",1,4.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","ATTGGTACGATAATAA",6,29.45,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16V V20M A67R L95Q F99L G117Y C195F",7
"lib1","SARS-CoV-2","ATTGGTACTGGAATAA",11,5.19,NA,NA,NA,NA,NA,NA,"stop","A89T R127*",2
"lib1","SARS-CoV-2","ATTGGTCATCTATATA",7,168.4,10.8,0.03,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGGTCTTCTAGAAG",4,35.94,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9K V37S Q84W L131W",4
"lib1","SARS-CoV-2","ATTGGTGAATCGAAAA",16,159.86,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y66E A89F I138T",3
"lib1","SARS-CoV-2","ATTGGTGAATTGGACA",3,25.76,9.59,-1.17,0.07,2.83,1.02,0,">1 nonsynonymous","D59E R136F F156R",3
"lib1","SARS-CoV-2","ATTGGTGACACCTGTG",2,0.27,NA,NA,NA,NA,NA,NA,"stop","R16* C49R I72G",3
"lib1","SARS-CoV-2","ATTGGTGGTTACCGCT",1,10.14,9.8,-0.97,0.12,2.68,1,0.01,">1 nonsynonymous","T3R G146S F160C G174T",4
"lib1","SARS-CoV-2","ATTGGTGTCAATTAGG",6,27.67,9.28,-1.49,0.26,1.53,1.07,0.03,">1 nonsynonymous","E10T A42N G86H",3
"lib1","SARS-CoV-2","ATTGGTGTCACCTAAC",6,59.46,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F99P F126G E186R",3
"lib1","SARS-CoV-2","ATTGGTTAACATTGAC",8,48.01,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4M N13T K48S G83D N92T D137E V173M",7
"lib1","SARS-CoV-2","ATTGGTTCCAATGCTT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G E141S N157V Q176A",4
"lib1","SARS-CoV-2","ATTGGTTCCGAACCGG",6,82.85,10.15,-0.61,0.1,2.54,1.01,0,"1 nonsynonymous","V65W",1
"lib1","SARS-CoV-2","ATTGGTTCTTATTGAG",4,137.46,10.64,-0.12,0.04,2.83,1.07,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","ATTGGTTGAGCATTCC",7,52.96,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","N13H Y91C N107T K114T Y119L Q176T",6
"lib1","SARS-CoV-2","ATTGGTTTACAAAATC",4,45.1,6,-4.76,1.18,1.5,1.17,0.01,">1 nonsynonymous","R27L V52P A89T P161T",4
"lib1","SARS-CoV-2","ATTGGTTTTTAGATAA",2,19.88,10.93,0.16,0.08,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGTAAAACCCTTGA",3,0.54,NA,NA,NA,NA,NA,NA,"stop","F99I N109R P133S I142*",4
"lib1","SARS-CoV-2","ATTGTAAAAGAGTAAA",5,52.8,9.53,-1.24,0.1,2.14,1.09,0,">1 nonsynonymous","K56F N107Q",2
"lib1","SARS-CoV-2","ATTGTAAACTCCAGTA",2,46.57,10.64,-0.13,0.03,2.94,1.04,0,">1 nonsynonymous","Y39Q L131V",2
"lib1","SARS-CoV-2","ATTGTAAATAACCACC",1,9.78,8.71,-2.06,0.26,1.5,1,0.03,">1 nonsynonymous","K48M Y66G V153E",3
"lib1","SARS-CoV-2","ATTGTAAATTTCAGAA",5,52.46,10.79,0.02,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGTAACAACCCTCA",7,91.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38K K56F Y119M",3
"lib1","SARS-CoV-2","ATTGTAACACTTATAT",2,1.27,NA,NA,NA,NA,NA,NA,"stop","D59* E141P E154S K198T",4
"lib1","SARS-CoV-2","ATTGTAACAGAGCAGT",1,42.74,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64R I88M D98E V115W R136N C158R",6
"lib1","SARS-CoV-2","ATTGTAACCAGTGAAA",2,21.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15K N64P N107T S129A V173C A190S",6
"lib1","SARS-CoV-2","ATTGTAACGAGGAGCT",6,55.01,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","A14L G86D Y175L K198E",4
"lib1","SARS-CoV-2","ATTGTAACTAAATCTA",2,30.83,6.17,-4.59,1.16,1.5,1.28,0.04,">1 nonsynonymous","A22G C31N Y178F V182Y",4
"lib1","SARS-CoV-2","ATTGTAAGACGCGAAA",8,110.18,9.89,-0.87,0.08,2.08,1.07,0,">1 nonsynonymous","A14L N64Q D97T",3
"lib1","SARS-CoV-2","ATTGTAAGCATAACAA",4,29.07,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9W Y35F N40L V65L S113K G146K F156R S184F",8
"lib1","SARS-CoV-2","ATTGTAAGCTATTCAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W P82L G117Y V180L",4
"lib1","SARS-CoV-2","ATTGTAATATACACCA",5,105.2,10.68,-0.09,0.04,2.92,1.04,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","ATTGTAATGCGTTCGC",3,18.49,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V37S L122P G152R",3
"lib1","SARS-CoV-2","ATTGTAATTAAGAAGT",1,22.51,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N64E A105C F160G F167V",4
"lib1","SARS-CoV-2","ATTGTACAATAACCAC",3,0.83,NA,NA,NA,NA,NA,NA,"stop","G9Q T85A T201*",3
"lib1","SARS-CoV-2","ATTGTACAGAAATGAC",1,74.74,10.11,-0.65,0.08,2.44,1.08,0,">1 nonsynonymous","L5Y T15M Y66T T85N",4
"lib1","SARS-CoV-2","ATTGTACATAAAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61G F185V K198*",3
"lib1","SARS-CoV-2","ATTGTACGAATATTCC",2,18.08,10.08,-0.69,0.07,2.92,1.02,0,">1 nonsynonymous","V77L S113G",2
"lib1","SARS-CoV-2","ATTGTACGCATTAACT",5,127.66,10.33,-0.43,0.05,2.96,1,0,">1 nonsynonymous","C6S C61N",2
"lib1","SARS-CoV-2","ATTGTACGTACAAACA",1,27.99,10.54,-0.22,0.07,2.87,1.07,0,"1 nonsynonymous","G116F",1
"lib1","SARS-CoV-2","ATTGTACGTTGGAGCA",6,71.67,8.28,-2.48,0.16,1.91,1.15,0.01,">1 nonsynonymous","N40L D90L Y143M S184V",4
"lib1","SARS-CoV-2","ATTGTACTCGATGAAC",7,24.15,6.77,-3.99,0.41,1.5,1.15,0.02,">1 nonsynonymous","P96Q K128E S139A P149M",4
"lib1","SARS-CoV-2","ATTGTACTTATCGTGG",2,22.22,10.59,-0.17,0.09,2.92,1.06,0.01,"1 nonsynonymous","D97I",1
"lib1","SARS-CoV-2","ATTGTAGATAAACATG",4,9.33,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S36L Q84G V103P",3
"lib1","SARS-CoV-2","ATTGTAGATCAATACG",5,45.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F62S D112T R127M",3
"lib1","SARS-CoV-2","ATTGTAGTTTACACTA",6,0.12,NA,NA,NA,NA,NA,NA,"stop","G9L S19L P82* S108V G155T",5
"lib1","SARS-CoV-2","ATTGTATAAAAGTATG",4,28.34,6,-4.76,2,1.5,1.14,0.04,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","ATTGTATAAGGCACAA",1,22.84,6.94,-3.83,0.21,1.95,1.11,0.01,">1 nonsynonymous","R78E G117A E141S F156D",4
"lib1","SARS-CoV-2","ATTGTATGCAATGGAC",7,36.27,9.37,-1.39,0.13,2.04,1.12,0.01,">1 nonsynonymous","N107Q V153W",2
"lib1","SARS-CoV-2","ATTGTATTCAAGCTTA",2,12.48,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S41H F62V V103A G117E",4
"lib1","SARS-CoV-2","ATTGTCAAGTCGGATT",3,43.6,10.18,-0.59,0.05,2.76,1.01,0,">1 nonsynonymous","F12V K56L",2
"lib1","SARS-CoV-2","ATTGTCACACAGGAAT",4,121.41,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G117H N157S Y178T",3
"lib1","SARS-CoV-2","ATTGTCACTTATAGAA",1,21.14,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N1E Q79P N92F",3
"lib1","SARS-CoV-2","ATTGTCAGGAAAAAGC",8,22.18,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Q79R W106Q N157G",3
"lib1","SARS-CoV-2","ATTGTCATAAAGATGA",3,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84M A105P E141K Q168L",4
"lib1","SARS-CoV-2","ATTGTCATACTTATCG",8,66.09,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8V T15A Y35C P82G Q168I",5
"lib1","SARS-CoV-2","ATTGTCATCTCCCTGG",4,59.01,10.81,0.05,0.07,2.92,1.02,0,"1 nonsynonymous","I104W",1
"lib1","SARS-CoV-2","ATTGTCCAAAGACTGT",4,25.58,6,-4.76,2,3,1.11,0,">1 nonsynonymous","K26M Y39V W106E Y159L T170N P177S",6
"lib1","SARS-CoV-2","ATTGTCCAAAGGGAAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N30V V37I V77A D97T I104* P133V",6
"lib1","SARS-CoV-2","ATTGTCCACTCTATGA",6,160.28,9.06,-1.7,0.08,2.72,1.12,0,">1 nonsynonymous","Q144L F160S",2
"lib1","SARS-CoV-2","ATTGTCCATATCCGAC",2,52.24,9.22,-1.55,0.08,2.79,1.16,0,">1 nonsynonymous","V37T N151C F160R G166H T201K",5
"lib1","SARS-CoV-2","ATTGTCCATCATAATC",3,33.74,10.35,-0.42,0.07,2.78,1.06,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","ATTGTCCGCTTTTCAT",3,21.46,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K56F Y91T G155D",3
"lib1","SARS-CoV-2","ATTGTCGATAAACTTT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","ATTGTCGCTATTTAGT",2,65.33,7.67,-3.1,0.15,1.62,1.21,0.01,">1 nonsynonymous","I28M C102V I142K",3
"lib1","SARS-CoV-2","ATTGTCGGTACTTGAA",5,17.75,6,-4.76,2,3,1.21,0,">1 nonsynonymous","N1K S45T D68R G152H",4
"lib1","SARS-CoV-2","ATTGTCTAAGATACGA",4,52.75,9.82,-0.94,0.1,2.46,1.01,0,">1 nonsynonymous","G9M L38W K56M T100N",4
"lib1","SARS-CoV-2","ATTGTCTCAAGTAAAT",2,57.45,10.88,0.12,0.1,2.87,1.01,0,">1 nonsynonymous","I138M S200V",2
"lib1","SARS-CoV-2","ATTGTCTTAAACGTTC",1,11.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113W S139A K199F",3
"lib1","SARS-CoV-2","ATTGTCTTTAATATAA",3,12.58,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","A33H S45Y G86K N120R",4
"lib1","SARS-CoV-2","ATTGTGAAAGGACGTA",2,11.51,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S164V V181S",2
"lib1","SARS-CoV-2","ATTGTGAAAGGTCTCT",4,50.67,10.27,-0.5,0.07,2.95,1.02,0,">1 nonsynonymous","Y35Q C61H",2
"lib1","SARS-CoV-2","ATTGTGAACTATATCA",2,29.61,10.29,-0.47,0.07,2.97,1.02,0,">1 nonsynonymous","L60F K87C",2
"lib1","SARS-CoV-2","ATTGTGACAACTCACC",4,12.85,NA,NA,NA,NA,NA,NA,"stop","R78T G86Q L95G C102* Y119M C158P F185I S200H",8
"lib1","SARS-CoV-2","ATTGTGAGGTTAATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28V K94*",2
"lib1","SARS-CoV-2","ATTGTGAGTCGAATCA",5,48.85,10.19,-0.58,0.09,2.71,1.04,0,">1 nonsynonymous","S69M E154S",2
"lib1","SARS-CoV-2","ATTGTGCAAAGATAAC",2,22.86,6.33,-4.44,0.64,1.5,1.08,0.02,">1 nonsynonymous","Y50L Y91I",2
"lib1","SARS-CoV-2","ATTGTGCATGGCTTAA",1,32.48,10.74,-0.02,0.1,2.86,1.06,0,"1 nonsynonymous","E141M",1
"lib1","SARS-CoV-2","ATTGTGCCCTTACAGA",3,18.07,10.86,0.09,0.07,2.9,1.04,0,">1 nonsynonymous","N40S P149S",2
"lib1","SARS-CoV-2","ATTGTGCGAGAGAGAA",7,15.11,NA,NA,NA,NA,NA,NA,"stop","S19* K87Q F126Y",3
"lib1","SARS-CoV-2","ATTGTGCTAATCAAAT",3,101.15,10.61,-0.15,0.06,2.83,1.03,0,">1 nonsynonymous","L5Q E76D N109R E154S",4
"lib1","SARS-CoV-2","ATTGTGCTTCCCAGTC",3,92.36,10.59,-0.18,0.08,2.84,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTGTGGATAAAGCTA",5,15.24,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D98R V103G N118L",3
"lib1","SARS-CoV-2","ATTGTGTATTCATAAA",8,62.57,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","ATTGTGTCGGCGATCA",3,93.84,10.61,-0.16,0.08,2.81,1,0,">1 nonsynonymous","W106Q N130K",2
"lib1","SARS-CoV-2","ATTGTGTTCACTGGTA",2,42.7,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","G83V Y119S T140R N151M Q168L P177G",6
"lib1","SARS-CoV-2","ATTGTGTTGTATTGAA",2,35.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N107L P161T T201S",3
"lib1","SARS-CoV-2","ATTGTTAAAAAAAAAC",3,52.11,10.18,-0.59,0.09,2.81,1.01,0,">1 nonsynonymous","I2F V11M",2
"lib1","SARS-CoV-2","ATTGTTAAAAAAAGTA",3,42.16,6.14,-4.63,0.43,1.5,1.12,0.01,">1 nonsynonymous","V20E G86W D90Y T148E G152L",5
"lib1","SARS-CoV-2","ATTGTTAAACTTGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18L T55F D97* W106L P133T",5
"lib1","SARS-CoV-2","ATTGTTACATCCTTTG",5,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V D34L L95S",3
"lib1","SARS-CoV-2","ATTGTTACATTCCCTG",6,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F A105R L162F",3
"lib1","SARS-CoV-2","ATTGTTACCCGCCTGA",1,18.38,6,-4.76,2,1.5,1.08,0.02,"1 nonsynonymous","G101D",1
"lib1","SARS-CoV-2","ATTGTTCAAGACTGGA",2,68.1,10.71,-0.05,0.04,2.92,1.05,0,"1 nonsynonymous","T140C",1
"lib1","SARS-CoV-2","ATTGTTCAATACGTAT",15,71.09,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3D D34Y V37G F99V Y123E P149E G155Y",7
"lib1","SARS-CoV-2","ATTGTTCACGACCACC",9,0.58,NA,NA,NA,NA,NA,NA,"stop","S41C C61V G83D K128* I138L",5
"lib1","SARS-CoV-2","ATTGTTCATAATGTTG",1,61.14,10.82,0.06,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGTTCCAATTATAC",9,734.44,9.24,-1.52,0.05,2.78,1.08,0,">1 nonsynonymous","T85L F156L N171S",3
"lib1","SARS-CoV-2","ATTGTTCCAGCGGAGT",3,19.8,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","Y21S L60R R124N L131R",4
"lib1","SARS-CoV-2","ATTGTTCCGAATATAT",2,6.14,10.85,0.08,0.16,3,1.01,0,">1 nonsynonymous","R27K S41F G152N T201A",4
"lib1","SARS-CoV-2","ATTGTTCCTAGATAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N40W D59K A89V F99A N107* L122E",6
"lib1","SARS-CoV-2","ATTGTTCCTGGGCACT",16,226.58,8.33,-2.44,0.13,2.13,1.11,0.01,">1 nonsynonymous","Y35F C61L V71T G146Q",4
"lib1","SARS-CoV-2","ATTGTTGCTAATATAG",1,9.84,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","D112A G146K",2
"lib1","SARS-CoV-2","ATTGTTGCTATCATTT",4,37.55,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W23V Q176S",2
"lib1","SARS-CoV-2","ATTGTTGTATCATCTG",2,22.61,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","P7Q A18L C61L K94E Q176L",5
"lib1","SARS-CoV-2","ATTGTTGTTTAAATAT",8,111.07,7.1,-3.66,0.24,1.5,1.18,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","ATTGTTTCGCGGTACA",4,40.27,10.6,-0.16,0.09,2.76,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGTTTCTGATAGAC",1,9.45,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N4D R16A K56R L95S A105D Y119L T201S",7
"lib1","SARS-CoV-2","ATTGTTTTACCAAGTA",2,79.89,10.75,-0.01,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTGTTTTACCAATGA",3,24.79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G51D P96T N107V K132L Y143F",5
"lib1","SARS-CoV-2","ATTGTTTTATATTACG",2,1.22,NA,NA,NA,NA,NA,NA,"stop","A14* I28R",2
"lib1","SARS-CoV-2","ATTGTTTTCTTTAAAC",1,23.94,10.08,-0.69,0.08,2.31,1.05,0,">1 nonsynonymous","V65Y L122E P149T",3
"lib1","SARS-CoV-2","ATTTAAAAAAACAATG",7,60.37,10.32,-0.44,0.1,2.7,1,0,">1 nonsynonymous","E10Y R27T",2
"lib1","SARS-CoV-2","ATTTAAAAAGCTAAGA",2,38.38,10.69,-0.08,0.14,2.85,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAAAAATGTACTA",5,6.86,7.25,-3.51,0.3,1.58,1.11,0.01,">1 nonsynonymous","Y50S C61T I104Q",3
"lib1","SARS-CoV-2","ATTTAAAACCGTCGAA",1,47,9.33,-1.43,0.11,2.85,1.16,0.01,">1 nonsynonymous","C61H Y119S S200H",3
"lib1","SARS-CoV-2","ATTTAAAACTGAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","R16D S113*",2
"lib1","SARS-CoV-2","ATTTAAAAGAAGAACT",2,34.37,8.82,-1.95,0.33,1.5,1.05,0.05,">1 nonsynonymous","W23F V37G I104A I138S V173F",5
"lib1","SARS-CoV-2","ATTTAAAAGACTACTG",12,87.56,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S45A P133S Y143N C158Q V173I",5
"lib1","SARS-CoV-2","ATTTAAAATTAACCAA",1,6.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13S Y91V",2
"lib1","SARS-CoV-2","ATTTAAACAAAGGAAT",1,15.05,10.21,-0.56,0.09,2.76,1.1,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","ATTTAAACACGGCGAA",5,133.18,9.78,-0.99,0.04,2.92,1.04,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","ATTTAAACATAATTAC",2,8.12,8.96,-1.8,0.14,2.07,1,0.01,">1 nonsynonymous","A105S Y121R",2
"lib1","SARS-CoV-2","ATTTAAACATACCAAA",1,20.28,6.89,-3.88,0.37,1.5,1.17,0.03,">1 nonsynonymous","G9F D112Y",2
"lib1","SARS-CoV-2","ATTTAAACATTGCAAC",6,41.51,10.79,0.03,0.04,2.98,1,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","ATTTAAACTCAAACGA",4,36.04,10.81,0.04,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAAACTCACAGAC",1,22.69,9.63,-1.13,0.08,2.92,1.06,0,">1 nonsynonymous","Y39L Y119N E141S",3
"lib1","SARS-CoV-2","ATTTAAAGATGGCGAG",4,50.74,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","G51F I88P",2
"lib1","SARS-CoV-2","ATTTAAAGCATCAGAG",3,13.9,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F12L V37I K87I G146F Y165I",5
"lib1","SARS-CoV-2","ATTTAAAGCCAGCTCA",3,43.66,8.94,-1.83,0.19,1.69,1.18,0.01,">1 nonsynonymous","R127T T201L",2
"lib1","SARS-CoV-2","ATTTAAATAAAAGTCT",2,27.09,10.91,0.14,0.07,2.92,1.07,0,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","ATTTAAATAATTTCGC",8,126.2,9.8,-0.96,0.11,1.91,1.04,0,">1 nonsynonymous","G51C I138R",2
"lib1","SARS-CoV-2","ATTTAAATCCAATAAG",7,1.79,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","ATTTAAATTAGAAAGT",3,15.08,6.92,-3.84,0.6,1.5,1.2,0.07,">1 nonsynonymous","F12L W23Q T148H V173I",4
"lib1","SARS-CoV-2","ATTTAAATTAGGAGAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L W106L",2
"lib1","SARS-CoV-2","ATTTAAATTCCTAACG",2,18.04,10.27,-0.49,0.08,2.8,1,0,">1 nonsynonymous","N107P Q144N",2
"lib1","SARS-CoV-2","ATTTAACAACATGTAG",8,57.1,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y35H A67L G86C V103T Y143L",5
"lib1","SARS-CoV-2","ATTTAACAACTCCAAA",1,24.26,10.62,-0.14,0.1,2.84,1.08,0,">1 nonsynonymous","C61A D97T T201S",3
"lib1","SARS-CoV-2","ATTTAACAAGCGCCCA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","N24E F126H S147*",3
"lib1","SARS-CoV-2","ATTTAACAAGTAACAT",5,67,10.69,-0.07,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAACACTTTATAA",4,16.96,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19L R25L C61A L95T T148L N151Y",6
"lib1","SARS-CoV-2","ATTTAACATTATGTCG",4,67.65,10.69,-0.08,0.05,2.92,1.04,0,">1 nonsynonymous","G9A S36V V173A",3
"lib1","SARS-CoV-2","ATTTAACCTTAGATGA",13,76.26,6.41,-4.36,0.33,1.5,1.13,0.01,">1 nonsynonymous","F8I D137P",2
"lib1","SARS-CoV-2","ATTTAACGGGCCGAAC",6,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101V Y143P Y175D",3
"lib1","SARS-CoV-2","ATTTAACTAAATCTAT",2,9.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90E T100D G116C",3
"lib1","SARS-CoV-2","ATTTAACTAGTGTTCC",11,6.54,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6A A33Y T55F F99I L125F",5
"lib1","SARS-CoV-2","ATTTAACTAGTTGCCC",8,20,9.25,-1.52,0.2,1.5,1.09,0.01,">1 nonsynonymous","A14W L60W A190T A192T",4
"lib1","SARS-CoV-2","ATTTAACTTCATCTGT",1,25.63,9.81,-0.96,0.11,2.36,1,0.01,">1 nonsynonymous","G51L T85R S113A E154N",4
"lib1","SARS-CoV-2","ATTTAAGAAAAACTCG",2,77.77,10.28,-0.49,0.03,2.91,1.07,0,"1 nonsynonymous","A145I",1
"lib1","SARS-CoV-2","ATTTAAGAAACATTAC",12,38.31,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C49S D97F S164Y",3
"lib1","SARS-CoV-2","ATTTAAGAATAGTTAT",9,88.47,9.26,-1.5,0.08,2.7,1.11,0,">1 nonsynonymous","F44I Y119V",2
"lib1","SARS-CoV-2","ATTTAAGAATCCAGCT",4,105.69,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5R A14Q F62Y I138C G172L",5
"lib1","SARS-CoV-2","ATTTAAGAATTCGCGG",9,28.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6K V52A G146M",3
"lib1","SARS-CoV-2","ATTTAAGACATATCAG",2,82.05,9.23,-1.54,0.08,2.79,1.13,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","ATTTAAGACCTGTTTA",4,49.02,10.66,-0.11,0.08,2.87,1.1,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","ATTTAAGAGAAGATAG",2,64.13,10.74,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAAGCTGGCCAGT",6,22.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100Y A105N A145Y P169S",4
"lib1","SARS-CoV-2","ATTTAAGTAAAAATGG",2,40.89,9.81,-0.95,0.1,2.31,1.05,0,">1 nonsynonymous","D34A G152H",2
"lib1","SARS-CoV-2","ATTTAAGTCCTGAACT",7,116.69,10.7,-0.06,0.03,2.95,1.02,0,"1 nonsynonymous","S139K",1
"lib1","SARS-CoV-2","ATTTAAGTGTTGCCAA",5,119.44,10.03,-0.73,0.06,2.76,1.04,0,">1 nonsynonymous","A22Y G155T T201E",3
"lib1","SARS-CoV-2","ATTTAAGTTACTACTT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","G51S T148R L162* K198L",4
"lib1","SARS-CoV-2","ATTTAAGTTAGTTGGT",2,45.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19R K132H Q176T",3
"lib1","SARS-CoV-2","ATTTAATAAATTATTA",2,16.89,7.2,-3.57,0.48,1.5,1,0.08,">1 nonsynonymous","E76I Q84L",2
"lib1","SARS-CoV-2","ATTTAATAACATCACT",2,18.3,8.68,-2.08,0.37,1.83,1.3,0.06,">1 nonsynonymous","N13L C61F G146P",3
"lib1","SARS-CoV-2","ATTTAATACTACCAAC",1,6.06,9.85,-0.91,0.07,2.84,1.06,0,">1 nonsynonymous","S45K T100V G174E",3
"lib1","SARS-CoV-2","ATTTAATATAAAAGGA",7,43.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5F W23E F62E G146A F156C",5
"lib1","SARS-CoV-2","ATTTAATATAAGAGCA",1,0.95,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAATATAGAGGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D90* V181L",2
"lib1","SARS-CoV-2","ATTTAATATCAAACCA",10,39.35,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","V103G S129L",2
"lib1","SARS-CoV-2","ATTTAATCCTGAATCT",13,237.84,10.74,-0.03,0.05,2.93,1.04,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","ATTTAATCGAGAAGTT",2,33.89,9.57,-1.2,0.1,2.53,1.11,0,">1 nonsynonymous","C6V Y123R",2
"lib1","SARS-CoV-2","ATTTAATCTACAGGAA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","K94* W106G L187M",3
"lib1","SARS-CoV-2","ATTTAATCTACCTATG",2,35.96,10.69,-0.08,0.07,2.84,1.11,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","ATTTAATCTTTTAATT",2,45.79,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y93Q R127H D137E G166C",4
"lib1","SARS-CoV-2","ATTTAATGAGGCTGAT",6,30.85,8.08,-2.68,0.31,1.5,1,0.05,">1 nonsynonymous","A33P S41L V103L",3
"lib1","SARS-CoV-2","ATTTAATGATAATCGG",1,34.43,10.75,-0.01,0.06,2.94,1.01,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","ATTTAATTACCAGTGA",3,51.61,8.19,-2.57,0.15,2.08,1.11,0.01,">1 nonsynonymous","V103T Q168E G174S",3
"lib1","SARS-CoV-2","ATTTAATTCCTAAGAG",10,51.29,7.52,-3.25,0.21,1.5,1.13,0.02,"1 nonsynonymous","C150R",1
"lib1","SARS-CoV-2","ATTTAATTGACAGGAA",3,24.38,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F47Y D59M V103G V173N V181L T201K",6
"lib1","SARS-CoV-2","ATTTACAAAAAAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N30* F44S V77M Y91G",4
"lib1","SARS-CoV-2","ATTTACAAAATAATCA",10,114.1,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L38R G101I K114L L188T",4
"lib1","SARS-CoV-2","ATTTACAAACTGCTAC",2,21.79,9.82,-0.94,0.09,2.02,1.04,0,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","ATTTACAAATAACTAT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","ATTTACAATTGATGTT",3,23.57,10.82,0.05,0.15,2.95,1,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","ATTTACAATTTGACAG",5,27.77,10.25,-0.51,0.22,2.26,1.03,0.01,">1 nonsynonymous","Q79H K198M",2
"lib1","SARS-CoV-2","ATTTACACAAAACATA",3,68.92,10.61,-0.15,0.04,2.89,1.04,0,">1 nonsynonymous","T15G H189N",2
"lib1","SARS-CoV-2","ATTTACACACCTTGCC",2,0.49,NA,NA,NA,NA,NA,NA,"stop","F12* C49H R127S",3
"lib1","SARS-CoV-2","ATTTACACTCGTCCTA",7,1.55,NA,NA,NA,NA,NA,NA,"stop","D34P D59I N130*",3
"lib1","SARS-CoV-2","ATTTACAGCAGTGTAC",11,62.77,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y123W C150D",2
"lib1","SARS-CoV-2","ATTTACAGCCAGACTT",5,14.66,7.36,-3.41,0.46,1.5,1.08,0.08,">1 nonsynonymous","R73F P96V N107D",3
"lib1","SARS-CoV-2","ATTTACAGTATCCGAC",1,29.89,10.66,-0.1,0.07,3,1,0,">1 nonsynonymous","Y50F S147L",2
"lib1","SARS-CoV-2","ATTTACAGTCACTAAA",3,4.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","ATTTACATCGTACAAC",6,193.35,10.74,-0.02,0.04,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTACATGGATTTTC",4,29.01,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F8W R73D L131W V153A T201C",5
"lib1","SARS-CoV-2","ATTTACATGTGCCGTG",1,24.72,10.44,-0.32,0.06,2.9,1.04,0,">1 nonsynonymous","T55A V181I",2
"lib1","SARS-CoV-2","ATTTACCAGGTATCCT",2,31.07,10.73,-0.04,0.03,2.98,1,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","ATTTACCATCAATTTA",7,43.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35R C61F Q84H Y121T V182R",5
"lib1","SARS-CoV-2","ATTTACCCAACTTCCG",1,30.92,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22P D97F P133R",3
"lib1","SARS-CoV-2","ATTTACCCATACTATT",10,179.16,10.52,-0.25,0.02,2.93,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","ATTTACCCTAAGCCCT",4,67.6,8.06,-2.7,0.17,1.61,1.11,0.01,">1 nonsynonymous","L5K A67V T140Y F156N Y165F",5
"lib1","SARS-CoV-2","ATTTACCCTTGCAAAG",6,119.74,10.74,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTACCTTAATAAAA",1,5.12,6.29,-4.47,2,3,1.23,0.01,">1 nonsynonymous","N1L N13S F99S N157I",4
"lib1","SARS-CoV-2","ATTTACCTTGACAGCA",2,68.92,10.17,-0.6,0.05,2.98,1,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","ATTTACGAAATGCTTG",2,495,10.12,-0.65,0.03,2.92,1,0,"1 nonsynonymous","C6G",1
"lib1","SARS-CoV-2","ATTTACGAACAAGACA",2,6.07,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","P54S V65D",2
"lib1","SARS-CoV-2","ATTTACGAGTACCATT",1,42.57,10.86,0.1,0.09,2.91,1.06,0,">1 nonsynonymous","T63H Y178H",2
"lib1","SARS-CoV-2","ATTTACGGAATAGAGA",9,102.83,10.06,-0.71,0.06,2.17,1.04,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","ATTTACGGACCAATTC",7,145.27,9.81,-0.96,0.04,2.91,1.05,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","ATTTACGGCCTCCTGG",3,40.8,10.13,-0.64,0.09,2.74,1,0,">1 nonsynonymous","F62V A105M S164A",3
"lib1","SARS-CoV-2","ATTTACGTGAAACTAG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","D34T K87Q D97* E141N",4
"lib1","SARS-CoV-2","ATTTACGTGAACTGTA",4,8.53,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F17A G83S G152W",3
"lib1","SARS-CoV-2","ATTTACGTTAGAACAA",5,98.04,10.74,-0.02,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTACTAGCTGAAAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S S200L",2
"lib1","SARS-CoV-2","ATTTACTAGTTAACGT",7,118.9,10.56,-0.2,0.04,2.87,1.03,0,">1 nonsynonymous","L5R T140S T148F",3
"lib1","SARS-CoV-2","ATTTACTATCAATTGA",2,48.4,9.91,-0.85,0.07,2.76,1.03,0,"1 nonsynonymous","P161G",1
"lib1","SARS-CoV-2","ATTTACTCCAAATCGC",3,38.78,7.55,-3.21,0.35,1.5,1.12,0.04,">1 nonsynonymous","Y50K K132N T201I",3
"lib1","SARS-CoV-2","ATTTACTCCCCACAAA",3,48.4,8,-2.77,0.34,1.5,1.13,0.03,">1 nonsynonymous","A22G V37L Y91L W106M",4
"lib1","SARS-CoV-2","ATTTACTCCCTATGCT",6,78.79,8.39,-2.37,0.35,1.5,1.23,0.05,">1 nonsynonymous","E76T Q84H",2
"lib1","SARS-CoV-2","ATTTACTCTCGCGAGA",5,34.38,6,-4.76,2,2.28,1.12,0,">1 nonsynonymous","L95M C150L",2
"lib1","SARS-CoV-2","ATTTACTGCTATCTAC",13,3.51,NA,NA,NA,NA,NA,NA,"stop","S147T N157* T201I",3
"lib1","SARS-CoV-2","ATTTACTTAAAGTCTA",2,39.77,9.81,-0.95,0.1,2.29,1.03,0,">1 nonsynonymous","P7T N40P D75F",3
"lib1","SARS-CoV-2","ATTTACTTAGACAGAT",1,41.5,10.75,-0.01,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTACTTAGACAGTG",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F V32I A33Q A42V E135V V181M",6
"lib1","SARS-CoV-2","ATTTACTTCACTCTCA",2,70.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6G Y121G P177M",3
"lib1","SARS-CoV-2","ATTTAGAAAAATCTAC",5,4.11,NA,NA,NA,NA,NA,NA,"stop","L38* T148A V153I Y165I T201G",5
"lib1","SARS-CoV-2","ATTTAGAAAGTAAGGG",1,36.65,8.92,-1.84,0.19,1.63,1.19,0.02,">1 nonsynonymous","G51V D90L",2
"lib1","SARS-CoV-2","ATTTAGAACATTTTCC",4,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y T140S L183K",3
"lib1","SARS-CoV-2","ATTTAGAACGTATACG",11,40.54,6,-4.76,1.07,1.5,1.14,0.05,">1 nonsynonymous","V71N P82D I88R C102L V173G",5
"lib1","SARS-CoV-2","ATTTAGAACGTGCGAT",2,5.64,7.56,-3.2,0.55,1.5,1.1,0.05,">1 nonsynonymous","C6M V77Q T201L",3
"lib1","SARS-CoV-2","ATTTAGAACTTGACCC",6,1.33,NA,NA,NA,NA,NA,NA,"stop","K48S Y91T G146* C158A",4
"lib1","SARS-CoV-2","ATTTAGAATTAGTATC",9,30.7,6.2,-4.56,0.62,1.5,1.13,0.01,">1 nonsynonymous","G51Y A89T A105D G152Y",4
"lib1","SARS-CoV-2","ATTTAGACACCATGAC",5,130.63,10.11,-0.65,0.1,2.54,1.01,0,">1 nonsynonymous","F44S T55P G146S",3
"lib1","SARS-CoV-2","ATTTAGACATCCGGTA",2,1.01,NA,NA,NA,NA,NA,NA,"stop","A89C D97* L111V R136Y Q176H",5
"lib1","SARS-CoV-2","ATTTAGACCAAAAAAT",6,73.29,10.68,-0.09,0.07,2.92,1.08,0,">1 nonsynonymous","Y35M T55K",2
"lib1","SARS-CoV-2","ATTTAGACCACCTAAA",1,30.37,10.52,-0.24,0.06,2.89,1.02,0,">1 nonsynonymous","D34N A192T",2
"lib1","SARS-CoV-2","ATTTAGACCTTTGTTC",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83H Y123M G152Y A190P",4
"lib1","SARS-CoV-2","ATTTAGAGCATTCACT",5,37.47,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12S P96F S139D",3
"lib1","SARS-CoV-2","ATTTAGAGGACCAAAA",7,87.12,7.96,-2.8,0.13,1.68,1.11,0.01,">1 nonsynonymous","T15V K87G N118K",3
"lib1","SARS-CoV-2","ATTTAGAGTTCTGTAT",3,53.89,9.89,-0.87,0.06,2.84,1.04,0,"1 nonsynonymous","N118V",1
"lib1","SARS-CoV-2","ATTTAGATCATTTTAT",2,7.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48G L60K T85L S139P T201M",5
"lib1","SARS-CoV-2","ATTTAGATCTATCCAA",3,75.21,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L60S L95D K114I N120V N130S",5
"lib1","SARS-CoV-2","ATTTAGCACTTGCGTA",8,175.96,10.03,-0.74,0.08,2.76,1.04,0,">1 nonsynonymous","G9A Y121L G152Y K199N",4
"lib1","SARS-CoV-2","ATTTAGCATCAAAAGG",5,48.17,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y91P P133R",2
"lib1","SARS-CoV-2","ATTTAGCCCTTACTTA",5,21.03,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","P96F I104K S113C G146K F156S T201E",6
"lib1","SARS-CoV-2","ATTTAGCTAATAGCAT",5,32.67,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P96G Y165S",2
"lib1","SARS-CoV-2","ATTTAGGAAAGCCAAT",3,41.86,6.38,-4.39,0.34,1.5,1.09,0.01,">1 nonsynonymous","I28P Q84H P133A S184T",4
"lib1","SARS-CoV-2","ATTTAGGACATGACTA",6,28.07,9.54,-1.22,0.18,1.67,1.1,0.01,">1 nonsynonymous","R27C V37S F44V K56H D98V",5
"lib1","SARS-CoV-2","ATTTAGGACTATGGTA",9,52.52,6.04,-4.73,1.65,1.5,1.34,0.04,">1 nonsynonymous","T55A F99V N107S I142V",4
"lib1","SARS-CoV-2","ATTTAGGCTGGATTAT",5,23.78,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","R25P L57R",2
"lib1","SARS-CoV-2","ATTTAGGGACACCCAG",7,46.15,6.72,-4.05,0.49,1.5,1.22,0.03,">1 nonsynonymous","F8L A42L V77E Y119V Q176V",5
"lib1","SARS-CoV-2","ATTTAGGTACTACGAA",2,19.27,9.79,-0.98,0.06,2.84,1.1,0,">1 nonsynonymous","T148I F156T",2
"lib1","SARS-CoV-2","ATTTAGGTGAGAGAAG",2,72.33,8.73,-2.04,0.13,2.58,1.09,0.01,">1 nonsynonymous","I2S D59A A89S N120T T201D",5
"lib1","SARS-CoV-2","ATTTAGTAAACCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57K I72T",2
"lib1","SARS-CoV-2","ATTTAGTACAAATAGA",2,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W D97Y T100S K128F G146L L183H",6
"lib1","SARS-CoV-2","ATTTAGTACTATCTTA",1,2.52,NA,NA,NA,NA,NA,NA,"stop","T15E T55* E76Q P149R",4
"lib1","SARS-CoV-2","ATTTAGTATTTTACAT",1,38.64,10.81,0.05,0.06,2.85,1.06,0,">1 nonsynonymous","A89S P191S",2
"lib1","SARS-CoV-2","ATTTAGTCCACAGACA",9,102.34,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A105I G116R K132V P149H",4
"lib1","SARS-CoV-2","ATTTAGTCCATGTTGG",1,19.4,10.9,0.13,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTAGTTTAGTGGAA",9,95.37,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D112L C158W",2
"lib1","SARS-CoV-2","ATTTATAAAAAACTGC",4,101.81,10.72,-0.04,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTATAAAATAACCA",1,26.38,10.54,-0.22,0.13,2.32,1,0.01,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","ATTTATAAATACCACC",6,75.37,10.32,-0.44,0.08,2.77,1.05,0,">1 nonsynonymous","L122S F134I",2
"lib1","SARS-CoV-2","ATTTATAAATTAGGTT",3,75.29,10.08,-0.68,0.06,2.91,1,0,">1 nonsynonymous","G116L N171S",2
"lib1","SARS-CoV-2","ATTTATAAGCAGAAAT",1,8.63,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","L60D G155S F167S G172V",4
"lib1","SARS-CoV-2","ATTTATAAGCGCCACG",4,48,10,-0.77,0.06,2.92,1,0,">1 nonsynonymous","L60H K114G",2
"lib1","SARS-CoV-2","ATTTATAATAACGCTA",5,2.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89K",1
"lib1","SARS-CoV-2","ATTTATACAAACAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","T55V I138* S184G T201A",4
"lib1","SARS-CoV-2","ATTTATACATTTTCAT",2,34.52,10.62,-0.15,0.06,2.97,1,0,">1 nonsynonymous","F62T I138R",2
"lib1","SARS-CoV-2","ATTTATACCAAATTAC",4,52.8,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","ATTTATACCCCCTCAT",2,40.42,10.79,0.03,0.08,2.94,1.03,0,"1 nonsynonymous","E141T",1
"lib1","SARS-CoV-2","ATTTATACTAAGCAAA",3,43.21,10.56,-0.2,0.09,2.8,1.09,0,">1 nonsynonymous","K56S D90T T201A",3
"lib1","SARS-CoV-2","ATTTATAGAACATTTT",2,19.93,6,-4.76,2,2.18,1.06,0.01,">1 nonsynonymous","L5I D34R S41P L95V D112F E186I A192T K198W",8
"lib1","SARS-CoV-2","ATTTATAGTTGTTCCG",3,77.32,8.37,-2.39,0.28,1.5,1.11,0.03,">1 nonsynonymous","Y35P Q176S",2
"lib1","SARS-CoV-2","ATTTATATAGACTTGC",5,130.95,10.51,-0.26,0.03,2.91,1.02,0,">1 nonsynonymous","T85S L122K K128F S164Y",4
"lib1","SARS-CoV-2","ATTTATATCCTTGCGA",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L Y93A L125Y V182S",4
"lib1","SARS-CoV-2","ATTTATCACACCGTAT",4,13.95,9.06,-1.7,0.12,2.8,1.12,0.01,">1 nonsynonymous","C61T K94H Y119F",3
"lib1","SARS-CoV-2","ATTTATCAGATCATTC",8,89.27,10.51,-0.25,0.04,2.91,1.01,0,">1 nonsynonymous","I2P P7V",2
"lib1","SARS-CoV-2","ATTTATCGATAAAATC",6,75.98,9.97,-0.8,0.09,2.18,1.03,0,">1 nonsynonymous","V37H W106L",2
"lib1","SARS-CoV-2","ATTTATCGCTTTACAG",6,298.78,9.89,-0.88,0.03,2.9,1.03,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","ATTTATCGGCCAATTT",4,65.3,6.17,-4.59,0.95,1.5,1.18,0.03,">1 nonsynonymous","T3P A89V S113K Q144T",4
"lib1","SARS-CoV-2","ATTTATCGGCCTAACA",6,85.09,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L38P Y143S G174V",3
"lib1","SARS-CoV-2","ATTTATCGTATTTAAT",3,6.29,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","V71F D97S",2
"lib1","SARS-CoV-2","ATTTATCTAAGAACAG",1,16.58,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","T15V T55P I72A V103C Q144N N171H Q176T",7
"lib1","SARS-CoV-2","ATTTATCTGGCCAAAA",3,133.24,10.14,-0.63,0.04,2.91,1.02,0,">1 nonsynonymous","R27V L122A E154H T201R",4
"lib1","SARS-CoV-2","ATTTATGACATTAAAA",5,42.52,6.32,-4.45,0.66,1.5,1.16,0.02,">1 nonsynonymous","R16M S69K Q84L",3
"lib1","SARS-CoV-2","ATTTATGACCACACGA",5,1.22,NA,NA,NA,NA,NA,NA,"stop","V77* A105K",2
"lib1","SARS-CoV-2","ATTTATGAGAATAATG",3,25.6,6,-4.76,2,1.5,1.11,0.01,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","ATTTATGATGTGTAAA",5,14.12,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N13F V77Q L95M G146L",4
"lib1","SARS-CoV-2","ATTTATGATTGTGAAG",9,59.95,6,-4.76,1.84,1.5,1.21,0.01,">1 nonsynonymous","L5T L38A C61R T85S C150Y",5
"lib1","SARS-CoV-2","ATTTATGCAACCAATA",11,143.7,9,-1.76,0.06,2.82,1.13,0,">1 nonsynonymous","Y119C P149E",2
"lib1","SARS-CoV-2","ATTTATGCGCACGTTT",1,6.89,10.74,-0.02,0.07,2.83,1.11,0,">1 nonsynonymous","N64I F160R",2
"lib1","SARS-CoV-2","ATTTATGGGATGACCA",1,42.55,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","ATTTATGGTGGGGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I88Y Y121F E141*",3
"lib1","SARS-CoV-2","ATTTATGTCGAATGAC",1,46.73,10.53,-0.24,0.05,2.92,1.03,0,">1 nonsynonymous","G9T I138L",2
"lib1","SARS-CoV-2","ATTTATGTGTTCAATA",4,42.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50S V115S Y119W I138L Y178C K198R",6
"lib1","SARS-CoV-2","ATTTATTCCGTTTTTC",9,134.19,9.83,-0.93,0.09,2.2,1.05,0,">1 nonsynonymous","Q84V D90G N110S F126M",4
"lib1","SARS-CoV-2","ATTTATTCGTATGATG",7,112.59,10.76,0,0.08,2.89,1.07,0,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","ATTTATTGGCAAGCTA",4,17.89,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","Y91Q Y123M I142L G155M",4
"lib1","SARS-CoV-2","ATTTATTGGGTTATTA",3,5.29,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","D34R V103G",2
"lib1","SARS-CoV-2","ATTTATTTCACCAACC",3,89.48,10.76,-0.01,0.06,2.93,1.01,0,">1 nonsynonymous","I2V G83C K199I",3
"lib1","SARS-CoV-2","ATTTATTTGCCTAATC",2,1.46,NA,NA,NA,NA,NA,NA,"stop","V11Y F70* T100M E135Y",4
"lib1","SARS-CoV-2","ATTTATTTTAACGCGC",1,22.49,10.66,-0.1,0.08,3,1,0.01,"1 nonsynonymous","E154N",1
"lib1","SARS-CoV-2","ATTTATTTTCGACGTA",5,43.11,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","K94W G155I",2
"lib1","SARS-CoV-2","ATTTATTTTGCTCATT",2,77.97,10.67,-0.1,0.05,2.95,1.03,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","ATTTATTTTTTCCCAA",8,160.65,10.67,-0.1,0.03,2.96,1.01,0,">1 nonsynonymous","Y39V N120F Q163G",3
"lib1","SARS-CoV-2","ATTTCAAAAAAACACG",1,13.81,10.39,-0.38,0.13,2.83,1.08,0.01,">1 nonsynonymous","T85I N151S",2
"lib1","SARS-CoV-2","ATTTCAAACTCTAGTT",2,57.91,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9S S41A K87V N92I Y121A",5
"lib1","SARS-CoV-2","ATTTCAAAGAACAGGG",6,91.45,10.65,-0.11,0.07,2.92,1.06,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","ATTTCAAAGTGGCCCA",4,100.22,10.21,-0.55,0.07,2.63,1.08,0,">1 nonsynonymous","Y123V E141R",2
"lib1","SARS-CoV-2","ATTTCAACCCGGCTAT",3,31.46,10.09,-0.68,0.11,2.12,1.05,0.01,">1 nonsynonymous","T85M G152S",2
"lib1","SARS-CoV-2","ATTTCAAGGCTACTCC",1,8.39,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","C61Q N107K E141C N157R",4
"lib1","SARS-CoV-2","ATTTCAAGTACATGTA",1,53.85,8.14,-2.63,0.26,1.93,1.25,0.02,">1 nonsynonymous","I142M C150S",2
"lib1","SARS-CoV-2","ATTTCAAGTATTATCG",3,16.58,9.31,-1.46,0.08,3,1.03,0,">1 nonsynonymous","P7T Y119N",2
"lib1","SARS-CoV-2","ATTTCAATACGTCCTG",2,16.39,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L38I V52C N157D Y175A",4
"lib1","SARS-CoV-2","ATTTCAATCAAAAACC",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N N13D V52S W106T",4
"lib1","SARS-CoV-2","ATTTCAATCATTCCAC",8,79.49,8.33,-2.44,0.17,1.56,1.14,0.01,">1 nonsynonymous","T63S Y91I T100S S139T S164G T201Y",6
"lib1","SARS-CoV-2","ATTTCAATTCATTTAA",3,19.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1T V71W Y159N",3
"lib1","SARS-CoV-2","ATTTCAATTCGACTAA",3,91.05,10.01,-0.76,0.06,2.85,1.05,0,">1 nonsynonymous","Y143L V153L N171T G174A",4
"lib1","SARS-CoV-2","ATTTCAATTGATCGTT",6,103.27,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F8M D112M E141Q",3
"lib1","SARS-CoV-2","ATTTCACAAGGCAGTA",3,50.4,10.49,-0.27,0.04,2.96,1,0,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","ATTTCACACAAATCAA",8,1.55,NA,NA,NA,NA,NA,NA,"stop","I2L E10* T100S G146M F160G",5
"lib1","SARS-CoV-2","ATTTCACACCGGAGTC",2,24.37,6,-4.76,1.91,1.5,1.16,0.01,">1 nonsynonymous","V37L N92D I138W G166N",4
"lib1","SARS-CoV-2","ATTTCACATATGTCTG",3,65.93,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S69W L122E N157L",3
"lib1","SARS-CoV-2","ATTTCACATATTTACA",4,26.19,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P82V T85K E135V P161D R179L S200K",6
"lib1","SARS-CoV-2","ATTTCACCTAATAATA",1,27.37,9.78,-0.98,0.12,2.07,1.09,0.01,">1 nonsynonymous","G9M P96H",2
"lib1","SARS-CoV-2","ATTTCACCTACTATTA",2,79.58,10.38,-0.38,0.18,2.26,1.09,0.01,">1 nonsynonymous","A22G Y39L G146L",3
"lib1","SARS-CoV-2","ATTTCACCTCAACAAG",4,29.18,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3E A14T K48L Y143N Q163L",5
"lib1","SARS-CoV-2","ATTTCACGAAACGTAT",4,19.37,6.66,-4.11,0.53,1.5,1.07,0.04,">1 nonsynonymous","D34E N64R D68M P96R D137T",5
"lib1","SARS-CoV-2","ATTTCACGATTTATGA",3,13.93,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N58C N151R R179N",3
"lib1","SARS-CoV-2","ATTTCACGTGACACCA",3,31.9,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D59V N92R D98Q",3
"lib1","SARS-CoV-2","ATTTCACGTTTACAGG",1,46.8,10.63,-0.13,0.07,2.89,1.04,0,">1 nonsynonymous","I104C K128H",2
"lib1","SARS-CoV-2","ATTTCACTAGTAATCA",8,42.6,6.13,-4.63,1.06,1.5,1.21,0.04,">1 nonsynonymous","A81L P96K",2
"lib1","SARS-CoV-2","ATTTCACTCACTATCA",4,59.09,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","D112Q T170Q",2
"lib1","SARS-CoV-2","ATTTCACTGAATTCGG",2,1.99,NA,NA,NA,NA,NA,NA,"stop","Q84* F99E",2
"lib1","SARS-CoV-2","ATTTCAGAAGCACACT",2,56.76,10.64,-0.13,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTCAGAATAAACAA",4,23.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N E76S I138L Q144C",4
"lib1","SARS-CoV-2","ATTTCAGACAGTACAG",6,93.5,10.53,-0.24,0.04,2.87,1.04,0,">1 nonsynonymous","Y39H C61G",2
"lib1","SARS-CoV-2","ATTTCAGCATAACCCG",10,1.39,NA,NA,NA,NA,NA,NA,"stop","L5A P133* C150T V173L Y178A V182W",6
"lib1","SARS-CoV-2","ATTTCAGCCAATTGTT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V P82V C150R Q163C",4
"lib1","SARS-CoV-2","ATTTCAGCCGAAAACC",2,13.29,6.29,-4.47,0.56,1.5,1.09,0.02,">1 nonsynonymous","S36M V103E T170L V181S",4
"lib1","SARS-CoV-2","ATTTCAGCTTGTATTG",3,1.01,NA,NA,NA,NA,NA,NA,"stop","L5P A42L G86N Y91* N107L Q144S",6
"lib1","SARS-CoV-2","ATTTCAGGGGCTACCC",2,92.53,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y50D Q79R F156G K198T",4
"lib1","SARS-CoV-2","ATTTCAGTAGCACAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I I72V N92K S129G T201I",5
"lib1","SARS-CoV-2","ATTTCAGTCTGTACAC",2,18.72,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3V F62G R136S T148P",4
"lib1","SARS-CoV-2","ATTTCAGTGAGGCACA",10,114.77,10.27,-0.49,0.03,2.92,1.05,0,">1 nonsynonymous","N1V F47W K87I K114Q",4
"lib1","SARS-CoV-2","ATTTCAGTTGTACATC",7,48.42,10.14,-0.62,0.07,2.29,1.03,0,">1 nonsynonymous","I80M Q84S",2
"lib1","SARS-CoV-2","ATTTCATACGAAATTA",2,35.57,10.71,-0.05,0.08,2.83,1.1,0,">1 nonsynonymous","Y35L I142V",2
"lib1","SARS-CoV-2","ATTTCATGAGATTAGT",2,15.86,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","R25S V77E S113W",3
"lib1","SARS-CoV-2","ATTTCATGGAGTGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17P P54* D90* I104K R127E Y143E",6
"lib1","SARS-CoV-2","ATTTCATGGATTACAG",7,94.06,10.48,-0.28,0.04,2.9,1.05,0,">1 nonsynonymous","Y39L K114E K128T S184M",4
"lib1","SARS-CoV-2","ATTTCATTTCAGTCAA",2,52.43,10.03,-0.74,0.03,2.87,1.02,0,">1 nonsynonymous","S129N Q176H",2
"lib1","SARS-CoV-2","ATTTCATTTTTACGCT",1,16.45,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","P7F N58K I80A L95P",4
"lib1","SARS-CoV-2","ATTTCCAATATAGTAA",5,6.89,NA,NA,NA,NA,NA,NA,"stop","V20A Y123S S139D T201*",4
"lib1","SARS-CoV-2","ATTTCCAATTCAAATA",3,24.54,6,-4.76,1.7,1.5,1.17,0.02,">1 nonsynonymous","K87Y R179A A190P",3
"lib1","SARS-CoV-2","ATTTCCACAACAGCAC",3,17.17,6.05,-4.72,0.79,1.5,1.08,0.01,">1 nonsynonymous","I88C K128F E135S Q168M R179F",5
"lib1","SARS-CoV-2","ATTTCCAGTTAGCTAG",4,14.37,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V11N F44G G86K S139C S200L",5
"lib1","SARS-CoV-2","ATTTCCCCAAATTCTC",4,17.85,7.33,-3.44,0.47,1.5,1.04,0.05,">1 nonsynonymous","K48G F99H",2
"lib1","SARS-CoV-2","ATTTCCCGACCCACCG",3,40.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41W F62P D98M W106V D112M Y159W",6
"lib1","SARS-CoV-2","ATTTCCCGATTTATCT",8,51.9,6.33,-4.43,0.73,1.5,1.18,0.03,">1 nonsynonymous","Y39M F44H S45Y V52A N58P D97N W106V",7
"lib1","SARS-CoV-2","ATTTCCCTAAAAAGAT",4,3.12,NA,NA,NA,NA,NA,NA,"stop","N4S A14D L38P W106* Y119I R124M",6
"lib1","SARS-CoV-2","ATTTCCCTATTATATT",11,54.99,6,-4.76,2,1.5,1.25,0.02,"1 nonsynonymous","I72K",1
"lib1","SARS-CoV-2","ATTTCCCTCGTCTTGG",2,1.18,NA,NA,NA,NA,NA,NA,"stop","L5R Y35* F44V G51F K199W",5
"lib1","SARS-CoV-2","ATTTCCGACAACGCGA",1,8.55,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y91V T170R P177I K199R",4
"lib1","SARS-CoV-2","ATTTCCGCGAATACAT",5,39.71,6.06,-4.71,0.79,1.5,1.12,0.01,">1 nonsynonymous","S53K V71P V103K I138Q T201L",5
"lib1","SARS-CoV-2","ATTTCCGGCCTTAAAA",5,198.92,10.79,0.02,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTCCGTGGATATGA",7,14.72,NA,NA,NA,NA,NA,NA,"stop","T55* K128S G155W P161L",4
"lib1","SARS-CoV-2","ATTTCCTAAACGTTAA",2,7.72,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","L5G F17R C49S P54H D68W D98R N110L",7
"lib1","SARS-CoV-2","ATTTCCTCCCTGCGTA",1,18.56,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","A89R N107Y S129C T201M",4
"lib1","SARS-CoV-2","ATTTCGAAACGCTTAA",11,39.04,10.14,-0.63,0.13,2.23,1.02,0.01,">1 nonsynonymous","T63S A81L",2
"lib1","SARS-CoV-2","ATTTCGACAATTTGAT",7,11.64,7.12,-3.65,0.5,1.5,1,0.06,">1 nonsynonymous","A89F I104C Y123N",3
"lib1","SARS-CoV-2","ATTTCGACAGCGTTGC",6,87.75,10.6,-0.16,0.05,2.91,1.05,0,"1 nonsynonymous","A33G",1
"lib1","SARS-CoV-2","ATTTCGACCGCGGTAG",2,37.01,10.24,-0.53,0.15,2.28,1.19,0.01,">1 nonsynonymous","G51T F134N",2
"lib1","SARS-CoV-2","ATTTCGACGCTCATTA",17,433.96,10.71,-0.05,0.06,2.88,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTTCGACTTCTAACT",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R D90F N107P",3
"lib1","SARS-CoV-2","ATTTCGATAATTGGAC",1,7.51,6.37,-4.39,2,1.5,1.12,0.04,">1 nonsynonymous","S19K N118I",2
"lib1","SARS-CoV-2","ATTTCGATGGCGGATA",1,25.42,6.19,-4.58,0.6,1.5,1.09,0.01,">1 nonsynonymous","A89V P161F",2
"lib1","SARS-CoV-2","ATTTCGATTGTCACTT",13,64.36,6.1,-4.66,0.38,1.5,1.1,0,">1 nonsynonymous","P82T N107T T148N",3
"lib1","SARS-CoV-2","ATTTCGATTGTCCAAA",1,77.53,6.33,-4.44,0.63,1.5,1.21,0.02,">1 nonsynonymous","C6L Y91Q Y175H",3
"lib1","SARS-CoV-2","ATTTCGCAGACGTTTG",2,92,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S36G N58S A67N A105Y",4
"lib1","SARS-CoV-2","ATTTCGCAGGCAATAT",8,15.87,7.4,-3.37,0.38,1.5,1.16,0.03,">1 nonsynonymous","K56G N64R N110I V180A",4
"lib1","SARS-CoV-2","ATTTCGCCACCAATTG",3,31.13,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V20R W23R",2
"lib1","SARS-CoV-2","ATTTCGCCCACCAAAC",2,11.6,6.57,-4.2,0.36,1.5,1.08,0.01,">1 nonsynonymous","P96C I104Y G166M",3
"lib1","SARS-CoV-2","ATTTCGCCCCTGAAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","Y93* C158A P169S",3
"lib1","SARS-CoV-2","ATTTCGCTCTACTGCG",2,13.36,10.61,-0.16,0.12,2.71,1.02,0.01,">1 nonsynonymous","E10Y N130A",2
"lib1","SARS-CoV-2","ATTTCGGAATACTAAA",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R D34S N109K K132D G152L Y178I",6
"lib1","SARS-CoV-2","ATTTCGGCATTCCAGA",5,118.97,9.55,-1.21,0.08,1.98,1.08,0,">1 nonsynonymous","C49V Y175F",2
"lib1","SARS-CoV-2","ATTTCGGTCTAACCAA",1,43.76,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R25L N107C",2
"lib1","SARS-CoV-2","ATTTCGTAAATACCAG",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105P I138F P169S",3
"lib1","SARS-CoV-2","ATTTCGTACGGTTGAT",4,0.15,NA,NA,NA,NA,NA,NA,"stop","V32R P161*",2
"lib1","SARS-CoV-2","ATTTCGTTAAAACCGG",5,42.43,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A81V G101V S113L Y119P",4
"lib1","SARS-CoV-2","ATTTCTAAAAAAGTAA",4,28.22,6,-4.76,1.71,1.5,1.14,0.02,">1 nonsynonymous","L95Y N120M A145S L187V",4
"lib1","SARS-CoV-2","ATTTCTAAATTCACAT",7,108.95,8.7,-2.06,0.09,2.67,1.12,0,">1 nonsynonymous","R73G T140L",2
"lib1","SARS-CoV-2","ATTTCTAACCGACATG",3,19.98,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T85G D98V C102P Q176R",4
"lib1","SARS-CoV-2","ATTTCTAACTATTTAT",3,40.12,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F47S G86L G101I E141G",4
"lib1","SARS-CoV-2","ATTTCTAAGATAAATA",5,1.27,NA,NA,NA,NA,NA,NA,"stop","K48M N58V E76S Y91* T100I G152D S200W",7
"lib1","SARS-CoV-2","ATTTCTAATAGGTCAT",2,23.51,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V71H",1
"lib1","SARS-CoV-2","ATTTCTAATGGATCAT",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F134G P161I T201F",4
"lib1","SARS-CoV-2","ATTTCTACAAAAGAAA",1,54.1,10.76,0,0.1,2.9,1.03,0,"1 nonsynonymous","G9H",1
"lib1","SARS-CoV-2","ATTTCTAGAAAGAAAC",1,44.08,10.55,-0.22,0.05,2.89,1.04,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","ATTTCTAGGAATCGCG",3,20.17,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","W23K D98C E141L",3
"lib1","SARS-CoV-2","ATTTCTAGTAGTAGTT",2,37.26,6.82,-3.95,0.33,1.63,1.06,0.03,">1 nonsynonymous","A42G D98M F167L",3
"lib1","SARS-CoV-2","ATTTCTATTAATGGTA",5,75.92,8.28,-2.49,0.23,1.73,1.14,0.02,">1 nonsynonymous","A22Y I104M I142S",3
"lib1","SARS-CoV-2","ATTTCTCACCTATCCC",9,165.77,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10I I104L P133T G146A Y175E",5
"lib1","SARS-CoV-2","ATTTCTCATAAAGTTA",4,46.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6E A14C T55D Y91M G155T N171S",6
"lib1","SARS-CoV-2","ATTTCTCCTTCATTAT",3,80.97,10.27,-0.49,0.05,2.78,1.05,0,">1 nonsynonymous","D90S S129W",2
"lib1","SARS-CoV-2","ATTTCTCGTAAGCAAA",1,12.29,9.32,-1.44,0.17,1.79,1.03,0.01,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","ATTTCTGATTCTTCGC",10,87.62,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37L G101T Q144Y",3
"lib1","SARS-CoV-2","ATTTCTGCGTTGACCT",4,32.99,9.21,-1.55,0.29,1.5,1.06,0.05,">1 nonsynonymous","G86R F156P",2
"lib1","SARS-CoV-2","ATTTCTGGGCCCTCAA",2,84.94,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","R27W K56V P82H",3
"lib1","SARS-CoV-2","ATTTCTGTTAACCTAC",13,422.74,10.52,-0.25,0.03,2.9,1.02,0,">1 nonsynonymous","P54S K128Q C195A",3
"lib1","SARS-CoV-2","ATTTCTTAACAAGTAC",5,53.36,10.63,-0.14,0.05,2.92,1,0,">1 nonsynonymous","F62L K128N",2
"lib1","SARS-CoV-2","ATTTCTTTACATGATG",1,6.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H P82L",2
"lib1","SARS-CoV-2","ATTTCTTTAGTCAATT",3,531.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N1G F8Y S41E N107Y E141C",5
"lib1","SARS-CoV-2","ATTTCTTTGTGTACAT",6,43.52,10.14,-0.62,0.07,2.7,1.03,0,">1 nonsynonymous","D98H K132P",2
"lib1","SARS-CoV-2","ATTTGAAAACATCGAT",2,31.57,10.55,-0.21,0.08,2.93,1,0,">1 nonsynonymous","F99W N130F",2
"lib1","SARS-CoV-2","ATTTGAAAACTGCATG",6,240.45,10.77,0,0.05,2.87,1.08,0,">1 nonsynonymous","R27V Y143F T201S",3
"lib1","SARS-CoV-2","ATTTGAAACTAAATGT",6,60.41,10.77,0,0.11,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","ATTTGAAATCACTAAA",13,0.02,NA,NA,NA,NA,NA,NA,"stop","T15M A33Q S41F L162*",4
"lib1","SARS-CoV-2","ATTTGAACAACCGCAT",1,31.09,6,-4.76,1.59,1.5,1.24,0.03,">1 nonsynonymous","S19T V32Q G83Y L95T S129F",5
"lib1","SARS-CoV-2","ATTTGAACCAATCGAA",8,242.46,8.46,-2.31,0.11,2.71,1.08,0,">1 nonsynonymous","K56T N109T N118T",3
"lib1","SARS-CoV-2","ATTTGAAGATACTCGG",10,1.12,NA,NA,NA,NA,NA,NA,"stop","F17M S113* R136G",3
"lib1","SARS-CoV-2","ATTTGAAGCATAGACG",4,11.23,6,-4.76,2,3,1.22,0,">1 nonsynonymous","R27A D90Q K114W D137A G152F",5
"lib1","SARS-CoV-2","ATTTGAAGTAGAAAAG",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T A81R I104N E141G",4
"lib1","SARS-CoV-2","ATTTGAATATCAGTGT",7,34.06,10.61,-0.16,0.06,2.89,1.03,0,"1 nonsynonymous","G83E",1
"lib1","SARS-CoV-2","ATTTGAATGTTTATTC",1,30.22,10.69,-0.08,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGAATTAAAAACC",3,0.76,NA,NA,NA,NA,NA,NA,"stop","Y35L E76G L95V S200*",4
"lib1","SARS-CoV-2","ATTTGACAATGTTCTG",5,22.64,6.57,-4.2,0.54,1.5,1.35,0.02,">1 nonsynonymous","N13S K48Q G86K I142F",4
"lib1","SARS-CoV-2","ATTTGACAATTAAACA",2,94.69,10.81,0.05,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGACATAATGCGG",4,122.82,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37E I88F K94T N120H",4
"lib1","SARS-CoV-2","ATTTGACATCTTCTGA",6,21.48,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8M C102G Y175V",3
"lib1","SARS-CoV-2","ATTTGACGACATTAAT",6,29.81,8.83,-1.94,0.29,1.5,1.07,0.04,">1 nonsynonymous","P82H D97H L125M",3
"lib1","SARS-CoV-2","ATTTGACGATGAAGTT",1,8.75,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","F12D V37C T170C",3
"lib1","SARS-CoV-2","ATTTGACTACAACGTC",1,13.64,7.1,-3.67,0.49,1.62,1.04,0.04,">1 nonsynonymous","V11H I28M W106P",3
"lib1","SARS-CoV-2","ATTTGACTATCCTAAT",1,23.39,10.79,0.03,0.09,2.94,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGAGATGTGATTT",11,145.9,8.21,-2.56,0.18,1.85,1.15,0.01,">1 nonsynonymous","I28L C61V D75R Y143S",4
"lib1","SARS-CoV-2","ATTTGAGCAGAGTAAA",6,1.17,NA,NA,NA,NA,NA,NA,"stop","G9L S43Y L60I V65* I88L L95V S113Y N120L T201A",9
"lib1","SARS-CoV-2","ATTTGAGCCGAGCACA",4,47.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8E I88L N107C N151L",4
"lib1","SARS-CoV-2","ATTTGAGCCGTTAATA",1,96.59,10.71,-0.05,0.05,2.89,1.07,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","ATTTGAGGGAAAAAAG",7,100.11,10.15,-0.62,0.05,2.63,1.02,0,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","ATTTGAGGGCGCTAAG",2,6.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W106D S129F G155I",3
"lib1","SARS-CoV-2","ATTTGAGTATAAGCGT",6,118.39,8.84,-1.93,0.13,1.92,1.15,0.01,">1 nonsynonymous","T15V N64Q N118V",3
"lib1","SARS-CoV-2","ATTTGAGTATTATACA",4,67.89,10.78,0.01,0.09,2.93,1.06,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","ATTTGATAATGTTGGG",3,0.11,NA,NA,NA,NA,NA,NA,"stop","K26S L60M N107* I142N",4
"lib1","SARS-CoV-2","ATTTGATACCTCCAAA",1,43.94,8.27,-2.49,0.14,2.53,1.05,0.01,">1 nonsynonymous","N58G Y143S",2
"lib1","SARS-CoV-2","ATTTGATGACTCGTTT",5,47.42,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S19W N58A D112L",3
"lib1","SARS-CoV-2","ATTTGATGCAGGCGTA",8,133.6,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5V S45V N157F Y175F",4
"lib1","SARS-CoV-2","ATTTGATGGTCCAAAC",6,45.26,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9S S45K F134N F185S",4
"lib1","SARS-CoV-2","ATTTGATTACATGAAT",1,17.22,6.25,-4.51,0.48,1.5,1.14,0.01,">1 nonsynonymous","V20M A33G N107R",3
"lib1","SARS-CoV-2","ATTTGATTGTAGGCGC",7,1.29,NA,NA,NA,NA,NA,NA,"stop","G9W T15Y N30* D68E Q79R Y123M",6
"lib1","SARS-CoV-2","ATTTGATTTCATCATA",1,7.87,6.18,-4.59,1.18,1.5,1.11,0.05,">1 nonsynonymous","I2V Y21E G83T",3
"lib1","SARS-CoV-2","ATTTGCAAAATGGGCC",1,10.01,10.81,0.04,0.13,2.9,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGCAAACGATTAA",7,52.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50R L122E S139P G146T",4
"lib1","SARS-CoV-2","ATTTGCAACTACGTGA",5,80.06,10.69,-0.07,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGCAGAGTATTCC",11,307.99,9.15,-1.61,0.05,2.83,1.1,0,">1 nonsynonymous","G9F Y119V",2
"lib1","SARS-CoV-2","ATTTGCAGGACAATTA",1,14.23,10.91,0.14,0.11,2.88,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGCCATAAGTTGC",4,115.3,9.34,-1.43,0.09,2.7,1.09,0,">1 nonsynonymous","N109T N130Y",2
"lib1","SARS-CoV-2","ATTTGCCATCTCATTG",2,41.05,10.18,-0.59,0.07,2.94,1,0,">1 nonsynonymous","N40H Y119R N151K",3
"lib1","SARS-CoV-2","ATTTGCCCCCGACCAA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T3M V65* S113L",3
"lib1","SARS-CoV-2","ATTTGCCCGTACAACA",2,117.12,10.73,-0.03,0.04,2.94,1.02,0,"1 nonsynonymous","L5C",1
"lib1","SARS-CoV-2","ATTTGCCCTGAATCAA",5,30.23,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Q84P F126S R136Q L162Q",4
"lib1","SARS-CoV-2","ATTTGCCTTCAACAAA",1,15.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N92G C158I",2
"lib1","SARS-CoV-2","ATTTGCCTTGAGGCCG",1,0.92,NA,NA,NA,NA,NA,NA,"stop","P7V R16* R127A Y165H",4
"lib1","SARS-CoV-2","ATTTGCGACGTCCGCC",1,23.52,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","P54K V77K E135M Q168K",4
"lib1","SARS-CoV-2","ATTTGCGATATTCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","W23G D34* R136A G155R",4
"lib1","SARS-CoV-2","ATTTGCGGACCCCGCA",2,49.04,6.08,-4.68,0.74,1.5,1.12,0.01,">1 nonsynonymous","T55H N64A V103F",3
"lib1","SARS-CoV-2","ATTTGCGTAGGAAGAC",1,0.71,NA,NA,NA,NA,NA,NA,"stop","C61* S139C",2
"lib1","SARS-CoV-2","ATTTGCTATTACGCAG",1,7.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T N110M K199R",3
"lib1","SARS-CoV-2","ATTTGCTCACATAAAA",3,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y C61D V182D",3
"lib1","SARS-CoV-2","ATTTGCTCTTACTAAC",2,7.05,6.22,-4.55,0.55,2.53,1.09,0.01,">1 nonsynonymous","N64Y V103S Y143W",3
"lib1","SARS-CoV-2","ATTTGCTGCTCAAGTA",4,65.41,10.57,-0.2,0.08,2.85,1.07,0,">1 nonsynonymous","F8L G9Y G116S",3
"lib1","SARS-CoV-2","ATTTGCTTAACAAGCA",3,5.94,6,-4.76,2,1.5,1.42,0.05,">1 nonsynonymous","T3Y A89V C102I T201N",4
"lib1","SARS-CoV-2","ATTTGGAAACATCAAT",2,9.41,6.93,-3.84,0.54,1.77,1.12,0.05,">1 nonsynonymous","D98L P149F N157P",3
"lib1","SARS-CoV-2","ATTTGGAAATCAAAAT",1,10.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F62E G83P Q176L",3
"lib1","SARS-CoV-2","ATTTGGACAATGCTTA",3,108.42,9.28,-1.48,0.05,2.88,1.07,0,"1 nonsynonymous","G117I",1
"lib1","SARS-CoV-2","ATTTGGACACACAAAT",9,43.73,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N58L I104R N120T L183I",4
"lib1","SARS-CoV-2","ATTTGGACGAATAAAA",7,50.51,9.87,-0.9,0.07,2.82,1,0,"1 nonsynonymous","T170F",1
"lib1","SARS-CoV-2","ATTTGGATAAAATTTG",2,81.17,8.71,-2.06,0.1,2.69,1.05,0,">1 nonsynonymous","F44R Y119V",2
"lib1","SARS-CoV-2","ATTTGGATATACTACT",8,65.23,6.19,-4.57,0.94,1.5,1.18,0.04,">1 nonsynonymous","C6Y K87G N107M",3
"lib1","SARS-CoV-2","ATTTGGATTCATGACA",8,194.45,10.72,-0.04,0.07,2.9,1.08,0,">1 nonsynonymous","L5K Y39S",2
"lib1","SARS-CoV-2","ATTTGGCATACAGCAG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","F44Y Y91S S113C K198*",4
"lib1","SARS-CoV-2","ATTTGGCATCTTTTCG",3,12.31,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G83D C102D A190S T201D",4
"lib1","SARS-CoV-2","ATTTGGCGATCACGTC",9,62.84,10.74,-0.02,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGGCTAATACTGC",4,79.19,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12S Q144S P177S",3
"lib1","SARS-CoV-2","ATTTGGCTACGAAGCT",2,9.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G83S N107I",2
"lib1","SARS-CoV-2","ATTTGGGATACCGGTG",6,2.55,NA,NA,NA,NA,NA,NA,"stop","L5H C31E A42D T85* F134N",5
"lib1","SARS-CoV-2","ATTTGGGATTCACCAA",12,83.65,9.52,-1.24,0.12,2.16,1.07,0.01,">1 nonsynonymous","S129L R136L T170S",3
"lib1","SARS-CoV-2","ATTTGGGCAGCGCTTG",4,17.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6E G51R D59M V65L G83S D98P Y175M",7
"lib1","SARS-CoV-2","ATTTGGTAGTTGTACA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","V20M A42N C150* T170Y",4
"lib1","SARS-CoV-2","ATTTGGTGCATGAAAC",5,23.89,10.58,-0.19,0.12,2.75,1.2,0.01,">1 nonsynonymous","I28M T201L",2
"lib1","SARS-CoV-2","ATTTGGTGCGCCAAAC",2,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V Y93K Y119M P149D",4
"lib1","SARS-CoV-2","ATTTGGTTTACTACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40Y C61D C102*",3
"lib1","SARS-CoV-2","ATTTGTAAAGATTAAT",3,48.54,10.16,-0.61,0.07,2.84,1.05,0,">1 nonsynonymous","T55Q E186H A190V",3
"lib1","SARS-CoV-2","ATTTGTAAGGTATAAA",14,147.25,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G51P L95S R136E I142A",4
"lib1","SARS-CoV-2","ATTTGTAATGCCAAGA",2,6.72,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C158Y L183A",2
"lib1","SARS-CoV-2","ATTTGTACTTAGTAGG",2,17.63,6.74,-4.03,0.43,1.5,1.05,0.04,"1 nonsynonymous","R124Y",1
"lib1","SARS-CoV-2","ATTTGTAGTTAGGGAC",4,1.17,NA,NA,NA,NA,NA,NA,"stop","Y66F E141*",2
"lib1","SARS-CoV-2","ATTTGTATGCGTGACT",4,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I Y50L D90V V173P",4
"lib1","SARS-CoV-2","ATTTGTATTAACCGCA",3,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65M C102D",2
"lib1","SARS-CoV-2","ATTTGTCAAGAAACTA",4,0.57,NA,NA,NA,NA,NA,NA,"stop","Y35I E76R G86C C158* G166R",5
"lib1","SARS-CoV-2","ATTTGTCAAGAAAGTA",4,0.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","ATTTGTCAGTAGTCCA",2,23.1,6,-4.76,2,1.5,1.35,0.04,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","ATTTGTCGACGTTCAT",5,58.96,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","G83L V103F P197L",3
"lib1","SARS-CoV-2","ATTTGTCGCCATTACT",3,12.17,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y121S L131V I138M P161L",4
"lib1","SARS-CoV-2","ATTTGTCTATCATATA",8,8.65,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C49K S129I G155F",3
"lib1","SARS-CoV-2","ATTTGTCTTGATCTAC",2,82.46,10.46,-0.3,0.06,2.83,1.01,0,">1 nonsynonymous","A14S S45N I142L S184T",4
"lib1","SARS-CoV-2","ATTTGTGATGTAAGAG",4,5.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9C V77L A89I V103P",4
"lib1","SARS-CoV-2","ATTTGTGCGAGCATAT",10,122.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27W W106L R127L",3
"lib1","SARS-CoV-2","ATTTGTGTACTTAAAT",5,63.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L60P Q144S G174A V182R T201Q",5
"lib1","SARS-CoV-2","ATTTGTGTGTTAGGGA",3,14.87,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","G86P Y119L",2
"lib1","SARS-CoV-2","ATTTGTTACCTCTTTA",4,19.35,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35T F44M V77Q T85N S200H",5
"lib1","SARS-CoV-2","ATTTGTTAGATAATCT",2,0.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTTGTTCTAATGGTA",12,83.09,10.81,0.04,0.07,2.95,1.02,0,">1 nonsynonymous","K26R S139N",2
"lib1","SARS-CoV-2","ATTTGTTGATATGCCG",1,6.89,6,-4.76,2,3,1.34,0.03,">1 nonsynonymous","Y21R S29K N107I E141I T201A",5
"lib1","SARS-CoV-2","ATTTGTTGTTTATATT",6,21.2,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","E10Q L60S G101V K128A",4
"lib1","SARS-CoV-2","ATTTGTTTGTTCTGAA",3,19.76,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","ATTTGTTTTTAGTAAC",2,0.22,NA,NA,NA,NA,NA,NA,"stop","Y123* I142F N151S",3
"lib1","SARS-CoV-2","ATTTTAAACAAAATAA",8,11.1,NA,NA,NA,NA,NA,NA,"stop","N40H F62* P82M P96L G116I P133L E141L P149V Y175D K198F",10
"lib1","SARS-CoV-2","ATTTTAAACATTCAAG",6,4.56,NA,NA,NA,NA,NA,NA,"stop","N120V F134* G152I",3
"lib1","SARS-CoV-2","ATTTTAAAGTATGCGC",2,64.97,10.75,-0.01,0.07,2.93,1.07,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","ATTTTAACAACTGTCA",5,44.14,6.2,-4.57,1.11,1.5,1.2,0.05,">1 nonsynonymous","A33S G83V F160T Q176K",4
"lib1","SARS-CoV-2","ATTTTAACATGCAATC",4,83.76,9.12,-1.65,0.05,2.78,1.07,0,">1 nonsynonymous","S129R G166L",2
"lib1","SARS-CoV-2","ATTTTAACATGCCGAC",2,18.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A14K V52W R127M N171L",5
"lib1","SARS-CoV-2","ATTTTAACCCACACCG",1,6.77,10.63,-0.13,0.17,3,1.04,0.01,"1 nonsynonymous","K114I",1
"lib1","SARS-CoV-2","ATTTTAACCCTCATCA",1,41.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8R A14N L60K N151I",4
"lib1","SARS-CoV-2","ATTTTAACTGTGGTCC",1,57.3,9.97,-0.79,0.13,2.65,1.03,0.01,">1 nonsynonymous","C61A P161S",2
"lib1","SARS-CoV-2","ATTTTAAGCCGGTAGG",2,20.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25V Y35L T85Q I104S H189L",5
"lib1","SARS-CoV-2","ATTTTAAGGTGTATGT",1,38.58,10.77,0.01,0.09,2.88,1.06,0,">1 nonsynonymous","F8L K56R",2
"lib1","SARS-CoV-2","ATTTTAAGTGACAGGA",1,16.96,10.47,-0.3,0.05,2.89,1.04,0,">1 nonsynonymous","N58W T201K",2
"lib1","SARS-CoV-2","ATTTTAAGTTGAAATC",7,34.99,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","F12E I72V G101R P161Y",4
"lib1","SARS-CoV-2","ATTTTAATAATGGTTG",3,7.52,8.77,-2,0.1,2.93,1.11,0,"1 nonsynonymous","G117C",1
"lib1","SARS-CoV-2","ATTTTAATATACCCAT",1,27.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","ATTTTAATATCGTTAG",2,17.63,10.13,-0.64,0.13,2.65,1.03,0.01,">1 nonsynonymous","Y121Q S139R",2
"lib1","SARS-CoV-2","ATTTTAATTACCACTT",3,41.12,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37C T100Y G146K G166Y V173Y",5
"lib1","SARS-CoV-2","ATTTTAATTTAATGAA",3,9.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37A K94L C158Y",3
"lib1","SARS-CoV-2","ATTTTACAAACGGACT",1,22.28,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K56W N64D G86Q Y123L I142C",5
"lib1","SARS-CoV-2","ATTTTACAAATATAAC",2,38.04,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","A14Y N40A C49K Y66C G101C Q163T",6
"lib1","SARS-CoV-2","ATTTTACAGAACCATT",1,85.17,10.44,-0.32,0.08,2.88,1.02,0,"1 nonsynonymous","F62G",1
"lib1","SARS-CoV-2","ATTTTACATGATTGCT",2,33.83,8.76,-2,0.14,2.47,1.07,0.01,">1 nonsynonymous","I80M F156T",2
"lib1","SARS-CoV-2","ATTTTACCAAAAGACG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","C6* T15M Y35F P82K K128M",5
"lib1","SARS-CoV-2","ATTTTACGAGATTCAG",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R S45M N120K R136L E186Y T201K",6
"lib1","SARS-CoV-2","ATTTTACTAAAACCTT",6,112.75,10.72,-0.04,0.08,2.92,1.05,0,"1 nonsynonymous","K132Q",1
"lib1","SARS-CoV-2","ATTTTACTACGCCCAC",5,70.69,10.31,-0.46,0.06,2.75,1.09,0,">1 nonsynonymous","S41F D90T",2
"lib1","SARS-CoV-2","ATTTTACTATAAACGA",10,133.65,9.87,-0.89,0.11,2.24,1.01,0,">1 nonsynonymous","Y91V N130Y",2
"lib1","SARS-CoV-2","ATTTTACTGTTTTCTG",2,48.44,9.72,-1.05,0.18,1.74,1.1,0.01,">1 nonsynonymous","L38S L60V",2
"lib1","SARS-CoV-2","ATTTTAGAAGATATCA",2,16.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55D L95M T170P V181L A192T",5
"lib1","SARS-CoV-2","ATTTTAGAATGACATA",1,24.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D75E P82Y I88T",3
"lib1","SARS-CoV-2","ATTTTAGAATTACGAC",6,81.68,9.07,-1.7,0.04,2.84,1.09,0,">1 nonsynonymous","R73G S200M",2
"lib1","SARS-CoV-2","ATTTTAGAGTGACTAG",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G S45M C49F",3
"lib1","SARS-CoV-2","ATTTTAGCAAAATCGT",1,243.37,10.34,-0.43,0.03,2.79,1.02,0,">1 nonsynonymous","S41Q A105S",2
"lib1","SARS-CoV-2","ATTTTAGCCCTACTGC",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T T15L T55M Q144R V173A",5
"lib1","SARS-CoV-2","ATTTTAGTAATGAAAA",3,51.82,10.35,-0.42,0.07,2.85,1.02,0,"1 nonsynonymous","N30L",1
"lib1","SARS-CoV-2","ATTTTAGTCACACAAG",9,283,10.78,0.01,0.05,2.89,1.06,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","ATTTTAGTTCATGACC",5,0,NA,NA,NA,NA,NA,NA,"stop","S41D D59* G174L",3
"lib1","SARS-CoV-2","ATTTTATAATAACCGA",1,20.23,6.89,-3.88,0.54,1.5,1.08,0.05,">1 nonsynonymous","F47S P96V E135R E141A",4
"lib1","SARS-CoV-2","ATTTTATAGGTGCTCC",2,5.93,9.62,-1.14,0.3,1.62,1.04,0.02,">1 nonsynonymous","E10H G146V",2
"lib1","SARS-CoV-2","ATTTTATATAAACTGT",11,123.02,10.39,-0.38,0.03,2.9,1.03,0,">1 nonsynonymous","Y123R P149H",2
"lib1","SARS-CoV-2","ATTTTATATAGTGTTA",1,27.56,6.19,-4.57,0.35,1.5,1.1,0,">1 nonsynonymous","C6F Y39M C61T C102W",4
"lib1","SARS-CoV-2","ATTTTATCACACCCGC",3,25.08,9.19,-1.58,0.21,1.75,1.17,0.02,">1 nonsynonymous","A89N I104L T140N",3
"lib1","SARS-CoV-2","ATTTTATGACCTGAAT",2,39.93,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F62D G86E T140G N151S Q176R",5
"lib1","SARS-CoV-2","ATTTTATGCATGACGC",4,42.72,10.62,-0.15,0.04,2.92,1.07,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","ATTTTATGGATTACAA",6,31.44,7.11,-3.66,0.18,1.5,1.06,0.01,">1 nonsynonymous","P82S P133L P149Y",3
"lib1","SARS-CoV-2","ATTTTATTAAAAATAG",2,62.66,10.48,-0.29,0.06,2.89,1.04,0,">1 nonsynonymous","T55A D90Q L95M",3
"lib1","SARS-CoV-2","ATTTTATTAGTCTACC",2,9.76,9.7,-1.06,0.27,1.59,1.17,0.03,">1 nonsynonymous","N4L R127H",2
"lib1","SARS-CoV-2","ATTTTATTATTGGTGG",4,38.22,10.63,-0.13,0.06,2.96,1.05,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","ATTTTATTCTTGGAGA",4,131.62,10.22,-0.54,0.05,2.76,1.01,0,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","ATTTTATTGATAACGA",6,80.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86W T100Q Q144K",3
"lib1","SARS-CoV-2","ATTTTATTGTCTGCTA",1,30.27,10.76,0,0.07,2.9,1.08,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","ATTTTCAAACAGCATA",11,96.89,6.09,-4.67,0.7,1.5,1.17,0.01,">1 nonsynonymous","G83V K94L V115H",3
"lib1","SARS-CoV-2","ATTTTCAAAGTTCCGG",2,57.81,10.74,-0.02,0.08,2.89,1.08,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","ATTTTCAATCGCGCAA",5,75.9,10.62,-0.15,0.03,2.97,1,0,">1 nonsynonymous","G9W P149Y",2
"lib1","SARS-CoV-2","ATTTTCACCGTCCCGG",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K N40V P82L F99I",4
"lib1","SARS-CoV-2","ATTTTCACCTCACATC",3,12.79,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A42C L60P Q84N Y93W",4
"lib1","SARS-CoV-2","ATTTTCACGATGAATG",5,16.39,6,-4.76,2,3,1.11,0,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","ATTTTCAGGTAAGCGA",2,25.39,10.65,-0.12,0.04,2.91,1.03,0,">1 nonsynonymous","K128V P149N",2
"lib1","SARS-CoV-2","ATTTTCAGTTAGTAAA",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S D59P N120C C150G S200T",5
"lib1","SARS-CoV-2","ATTTTCATCTACGGTG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","A22H Q163* K198R",3
"lib1","SARS-CoV-2","ATTTTCATGAAGGCGC",1,47.84,10.47,-0.29,0.05,2.89,1.05,0,"1 nonsynonymous","A89C",1
"lib1","SARS-CoV-2","ATTTTCATGAAGGTGT",9,69.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V11Y K48L N120E V182F K198W",5
"lib1","SARS-CoV-2","ATTTTCATGCTATAAA",13,13.8,10.5,-0.27,0.06,2.9,1,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","ATTTTCATTTTGCTGA",1,37.4,10.63,-0.13,0.08,2.83,1.06,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","ATTTTCCAAGACAGAT",10,56.74,8.98,-1.78,0.26,1.5,1.12,0.03,"1 nonsynonymous","W23E",1
"lib1","SARS-CoV-2","ATTTTCCATGGCTGAT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R Y121V S139V",3
"lib1","SARS-CoV-2","ATTTTCCATTGCTTAG",4,27.5,6.56,-4.2,0.53,1.5,1.13,0.03,">1 nonsynonymous","C6S I104C R136H",3
"lib1","SARS-CoV-2","ATTTTCCCACAATAGG",6,1.22,NA,NA,NA,NA,NA,NA,"stop","K56G P149T Q163R Y175*",4
"lib1","SARS-CoV-2","ATTTTCCGACAGAAAA",7,0.95,NA,NA,NA,NA,NA,NA,"stop","Q84F Y93M K128*",3
"lib1","SARS-CoV-2","ATTTTCCGGCACCGAA",1,7.15,7.5,-3.26,0.37,1.5,1.1,0.07,">1 nonsynonymous","N24W D34Y N58I G101Q I142A",5
"lib1","SARS-CoV-2","ATTTTCCTCGTACGGG",1,39.77,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C6R N24L Y39L C49F T85L Y121S N157Y",7
"lib1","SARS-CoV-2","ATTTTCGAATATATCA",2,100.46,6.08,-4.68,0.77,1.5,1.18,0.02,">1 nonsynonymous","S53M N64F C158F Q168H",4
"lib1","SARS-CoV-2","ATTTTCGACGATCTAA",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P C49R",2
"lib1","SARS-CoV-2","ATTTTCGACGCGCACT",10,96.87,10.66,-0.1,0.05,2.94,1.04,0,">1 nonsynonymous","C61S E76Q",2
"lib1","SARS-CoV-2","ATTTTCGATCAGCGCA",4,25.2,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F70I Q84T Y165H",3
"lib1","SARS-CoV-2","ATTTTCGCCTAAGCAT",1,39.64,9.89,-0.88,0.2,1.92,1.06,0.02,"1 nonsynonymous","L38G",1
"lib1","SARS-CoV-2","ATTTTCGCGCACTAGC",10,112.17,8.79,-1.97,0.16,1.5,1.05,0.01,">1 nonsynonymous","F12N G116S K198D",3
"lib1","SARS-CoV-2","ATTTTCGGCACCTGAA",2,59.18,10.78,0.02,0.06,2.93,1.04,0,"1 nonsynonymous","V153M",1
"lib1","SARS-CoV-2","ATTTTCGTAATGAAGG",5,18.71,10.21,-0.55,0.14,2.61,1.02,0.01,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","ATTTTCGTCTCCAATT",6,1.52,NA,NA,NA,NA,NA,NA,"stop","A33S K56C T85V Y119W L131* P149C",6
"lib1","SARS-CoV-2","ATTTTCTTAATAGCAG",2,97.88,10.57,-0.19,0.05,2.84,1.05,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","ATTTTCTTGTAATAAA",4,26.92,10.03,-0.74,0.11,2.25,1.09,0.01,">1 nonsynonymous","A42L A67Y T140E A192T",4
"lib1","SARS-CoV-2","ATTTTGAGAGACGCTA",9,204.28,10.74,-0.03,0.04,2.92,1.04,0,"1 nonsynonymous","V173D",1
"lib1","SARS-CoV-2","ATTTTGAGTACATCGC",3,16.61,9.66,-1.11,0.56,1.61,1.08,0.08,">1 nonsynonymous","A42F C49L L95P W106P G166K",5
"lib1","SARS-CoV-2","ATTTTGATAGTTCCAC",17,256.71,10.82,0.06,0.08,2.91,1.05,0,"1 nonsynonymous","I28M",1
"lib1","SARS-CoV-2","ATTTTGATCGCAGCCT",5,9.99,6.08,-4.68,1.68,1.5,1.24,0.08,">1 nonsynonymous","S43Y S45Y C61T V77P Y91V S164N",6
"lib1","SARS-CoV-2","ATTTTGATTGGTGTAC",2,49.95,10.67,-0.1,0.06,2.87,1,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","ATTTTGCAAACATGAT",1,12.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y35G I88R A105P",3
"lib1","SARS-CoV-2","ATTTTGCACACCCTGA",3,25.3,10.33,-0.44,0.09,2.72,1,0,"1 nonsynonymous","Q176M",1
"lib1","SARS-CoV-2","ATTTTGCACCCTAATG",3,86.25,8.27,-2.5,0.2,1.94,1.11,0.01,">1 nonsynonymous","T3S L57N A145L",3
"lib1","SARS-CoV-2","ATTTTGCATAATTACA",2,43.86,8.49,-2.28,0.23,1.5,1.28,0.02,">1 nonsynonymous","S45K Y121T",2
"lib1","SARS-CoV-2","ATTTTGCTCATAAACA",3,21.74,8.36,-2.4,0.25,1.5,1.16,0.01,">1 nonsynonymous","D68M T140Y P197N",3
"lib1","SARS-CoV-2","ATTTTGCTCCTGCATC",2,8.22,10.94,0.18,0.13,2.89,1.02,0.01,">1 nonsynonymous","T55A V153E T201Y",3
"lib1","SARS-CoV-2","ATTTTGGAAAAATAAT",1,44.49,10.51,-0.25,0.07,2.76,1.03,0,">1 nonsynonymous","A14G V173R",2
"lib1","SARS-CoV-2","ATTTTGGCACACAATT",4,31.59,6,-4.76,2,1.5,1.33,0.02,">1 nonsynonymous","Y50T N92L",2
"lib1","SARS-CoV-2","ATTTTGGTATAGAATG",1,90.39,10.65,-0.12,0.05,2.9,1.04,0,">1 nonsynonymous","N1T S129C",2
"lib1","SARS-CoV-2","ATTTTGGTCAGGATGA",4,21.12,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","W23V Y50C N92F G155N",4
"lib1","SARS-CoV-2","ATTTTGGTGGAGTACA",2,22.58,10.58,-0.18,0.06,2.89,1.04,0,">1 nonsynonymous","L38F T55S G116S L122S",4
"lib1","SARS-CoV-2","ATTTTGTCCATAAGGG",1,16.06,6.08,-4.69,0.55,1.6,1.06,0.01,">1 nonsynonymous","G86A D112M P197L",3
"lib1","SARS-CoV-2","ATTTTGTGTAAAACGA",5,21.08,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G86S V182H",2
"lib1","SARS-CoV-2","ATTTTGTTACATGATT",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H C158H V181L",3
"lib1","SARS-CoV-2","ATTTTTAAATATTTAT",5,0.71,NA,NA,NA,NA,NA,NA,"stop","A14* R25* I138R",3
"lib1","SARS-CoV-2","ATTTTTAACTAATGGT",5,180.39,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T3I W106F P177T",3
"lib1","SARS-CoV-2","ATTTTTAATAGATACG",2,32.15,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C49N T55C I80H",3
"lib1","SARS-CoV-2","ATTTTTACCACTCAGG",6,3906.05,10.2,-0.57,0.05,2.72,1.01,0,">1 nonsynonymous","N1T F47W S53P T140N",4
"lib1","SARS-CoV-2","ATTTTTACGATCTAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","V37L G86E F99S G155W V173*",5
"lib1","SARS-CoV-2","ATTTTTACTACTACAT",1,29.58,9.91,-0.85,0.14,2.57,1.01,0.01,">1 nonsynonymous","T15C R27L Q168F",3
"lib1","SARS-CoV-2","ATTTTTACTTTAAGTC",11,541.99,9.3,-1.47,0.04,2.87,1.08,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","ATTTTTAGAAACCGAG",1,8.58,9.86,-0.91,0.4,1.5,1,0.08,">1 nonsynonymous","G9P C31A K87G Y119S",4
"lib1","SARS-CoV-2","ATTTTTAGACGAGAAG",5,121.14,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","W106Q F134D Y143Q",3
"lib1","SARS-CoV-2","ATTTTTAGGATCGATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P F99V E141L P177G S200I",5
"lib1","SARS-CoV-2","ATTTTTATAGCTAATT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S D97N V103R P169M",4
"lib1","SARS-CoV-2","ATTTTTATCTGCCAGA",2,99.45,10.34,-0.43,0.05,2.92,1.02,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","ATTTTTCAAAATCTGG",1,3.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84F",1
"lib1","SARS-CoV-2","ATTTTTCAACCCAGGA",2,50.65,8.85,-1.91,0.21,1.5,1.11,0.02,">1 nonsynonymous","L60H P82A",2
"lib1","SARS-CoV-2","ATTTTTCAGTTGTAAC",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73T I138R",2
"lib1","SARS-CoV-2","ATTTTTCCCACTTCCC",2,0.81,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","ATTTTTCTAGCCTTCA",8,2.23,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib1","SARS-CoV-2","ATTTTTGAATTTGTCC",4,171.78,9.09,-1.67,0.12,1.86,1.12,0.01,">1 nonsynonymous","Y35S P161S",2
"lib1","SARS-CoV-2","ATTTTTGATTAACTAG",7,2.29,NA,NA,NA,NA,NA,NA,"stop","P7* K198P",2
"lib1","SARS-CoV-2","ATTTTTGCAAGTTCGA",4,46.79,6,-4.76,2,3,1.2,0,">1 nonsynonymous","P96F N120D G152Y C158D",4
"lib1","SARS-CoV-2","ATTTTTGGGGCGATAA",10,150.25,8.05,-2.71,0.2,1.5,1.11,0.01,">1 nonsynonymous","A18L G117V",2
"lib1","SARS-CoV-2","ATTTTTGTCTGAAGAA",2,92.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59E F167S",2
"lib1","SARS-CoV-2","ATTTTTGTTATTGACA",6,45.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44C G86S",2
"lib1","SARS-CoV-2","ATTTTTTACCGTATGA",3,24.19,10.76,0,0.04,2.94,1.04,0,">1 nonsynonymous","L5S A67V T100F",3
"lib1","SARS-CoV-2","ATTTTTTCAGGCTAAA",3,34.77,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35G Q84G S129V F167L",4
"lib1","SARS-CoV-2","ATTTTTTGCGTTGTTA",8,139.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D112S G172S",2
"lib1","SARS-CoV-2","ATTTTTTGCTTAATCA",2,27.9,6.27,-4.49,0.73,1.5,1.17,0.02,">1 nonsynonymous","Q84G Y91F A105E E141N",4
"lib1","SARS-CoV-2","ATTTTTTGGAAAAAAA",5,111.74,9.63,-1.14,0.05,2.83,1.07,0,">1 nonsynonymous","N1A N118R S129A",3
"lib1","SARS-CoV-2","ATTTTTTGGTACCCCG",5,37.78,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","C6M R25M A67F D98S G146V",5
"lib1","SARS-CoV-2","ATTTTTTTTAAACAGT",3,8.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N107T L122V P133S V182R",4
"lib1","SARS-CoV-2","CAAAAAAAAAAGTCGG",6,40.32,10.25,-0.51,0.09,2.72,1.05,0,">1 nonsynonymous","P7L R27M",2
"lib1","SARS-CoV-2","CAAAAAAAAACATCCC",8,182.4,9.19,-1.57,0.08,2.81,1.15,0,"1 nonsynonymous","G117Q",1
"lib1","SARS-CoV-2","CAAAAAAAAATAACCC",1,31,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2M A33Y T100A Y159G Y178T",5
"lib1","SARS-CoV-2","CAAAAAAAAATCATTC",5,26.15,7.24,-3.52,0.47,1.5,1.2,0.06,">1 nonsynonymous","C6V K87L L131N",3
"lib1","SARS-CoV-2","CAAAAAAAAATTAATT",3,20.59,9.67,-1.1,0.25,1.54,1.15,0.02,">1 nonsynonymous","K48G K128M",2
"lib1","SARS-CoV-2","CAAAAAAAAGGGCTAA",6,47.18,10.67,-0.1,0.05,2.95,1.01,0,">1 nonsynonymous","N130Y N151M",2
"lib1","SARS-CoV-2","CAAAAAAAATAAAAGC",4,42.26,8.4,-2.37,0.23,2.05,1.15,0.02,">1 nonsynonymous","R16W R73Y",2
"lib1","SARS-CoV-2","CAAAAAAACAGCTTGT",3,17.03,10.89,0.12,0.07,2.88,1.07,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","CAAAAAAACATTCGAA",2,33.73,10.78,0.02,0.06,2.84,1.1,0,"1 nonsynonymous","Y39V",1
"lib1","SARS-CoV-2","CAAAAAAACATTCGAG",3,76.47,6.06,-4.71,0.92,1.5,1.2,0.02,">1 nonsynonymous","F62K C158Y Y175K",3
"lib1","SARS-CoV-2","CAAAAAAACTAATTCA",8,102.5,10.8,0.03,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAAAACTTTATTA",5,24.89,9.52,-1.25,0.13,2.65,1.07,0.01,">1 nonsynonymous","T3M K114L E141V G174E",4
"lib1","SARS-CoV-2","CAAAAAAAGCTAATTA",1,16.53,8.4,-2.36,0.12,2.71,1.05,0.01,">1 nonsynonymous","I104Y S129K Y143C",3
"lib1","SARS-CoV-2","CAAAAAAAGGACGTCT",5,93.06,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","F44T C61S N157V",3
"lib1","SARS-CoV-2","CAAAAAAAGGATACCT",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F D34N T55A D112L G196W",5
"lib1","SARS-CoV-2","CAAAAAAATAAGCGCC",1,10.41,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A105D S139Y G174T P197F",4
"lib1","SARS-CoV-2","CAAAAAAATAATGCGA",2,42.57,7.3,-3.47,0.31,1.5,1.09,0.03,">1 nonsynonymous","F8L I28S L162T",3
"lib1","SARS-CoV-2","CAAAAAAATAGGGACG",1,8.17,6.03,-4.73,0.64,3,1.1,0.01,">1 nonsynonymous","Y50S V103L S129L I138H L188R",5
"lib1","SARS-CoV-2","CAAAAAAATCAAGTGC",8,160.63,10.41,-0.36,0.04,2.9,1.05,0,">1 nonsynonymous","N58E N64G K132A",3
"lib1","SARS-CoV-2","CAAAAAAATCGCGGGT",3,18.91,6.43,-4.33,0.78,1.5,1.07,0.06,">1 nonsynonymous","L5M D34L W106G",3
"lib1","SARS-CoV-2","CAAAAAAATGGAGAGA",3,0.9,NA,NA,NA,NA,NA,NA,"stop","D59* F160I",2
"lib1","SARS-CoV-2","CAAAAAAATTCTGATT",2,15.4,9.8,-0.96,0.43,1.5,1.03,0.07,">1 nonsynonymous","V37N P96Y S147L",3
"lib1","SARS-CoV-2","CAAAAAAATTGTTATA",4,21.14,10.14,-0.62,0.07,2.06,1.01,0,">1 nonsynonymous","K56E W106T S129Y",3
"lib1","SARS-CoV-2","CAAAAAACAACTGACG",2,40.37,8.5,-2.27,0.19,1.5,1.14,0.01,">1 nonsynonymous","N1L Y165N",2
"lib1","SARS-CoV-2","CAAAAAACAGATTGAG",2,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V K48W F156S",3
"lib1","SARS-CoV-2","CAAAAAACCAAGCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33K E76* N120S",3
"lib1","SARS-CoV-2","CAAAAAACCGCTCACG",6,15.1,10.79,0.02,0.14,2.93,1,0.01,">1 nonsynonymous","D59R N64T N109K",3
"lib1","SARS-CoV-2","CAAAAAACGACAATTG",1,13.63,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F12D Y175K",2
"lib1","SARS-CoV-2","CAAAAAACGATTCATA",5,28.14,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","E10A D112W N120E Y143R",4
"lib1","SARS-CoV-2","CAAAAAACGGCCGCAT",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A89C S113Y L125G",4
"lib1","SARS-CoV-2","CAAAAAACGTTTATAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S C49W F167E K198H",4
"lib1","SARS-CoV-2","CAAAAAACTACGACAG",6,102.71,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N58P N118H G146L",3
"lib1","SARS-CoV-2","CAAAAAACTAGTTGCT",8,138.95,10.75,-0.01,0.05,2.92,1.06,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","CAAAAAAGAACCAAAT",3,152.88,10.75,-0.01,0.06,2.92,1.04,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","CAAAAAAGAAGAGGAC",4,95.5,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14L A33L Q176I",3
"lib1","SARS-CoV-2","CAAAAAAGATACAAAC",2,32.7,10.69,-0.08,0.04,3,1,0,"1 nonsynonymous","I104M",1
"lib1","SARS-CoV-2","CAAAAAAGCACTCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8L Y39V N64* A190V",4
"lib1","SARS-CoV-2","CAAAAAAGCCACCTGA",2,9.55,NA,NA,NA,NA,NA,NA,"stop","L5* P82L P96I",3
"lib1","SARS-CoV-2","CAAAAAAGCCATGCGC",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5C S43N I72L Y93R P161A",5
"lib1","SARS-CoV-2","CAAAAAAGCGTAAACC",7,73.68,7.26,-3.5,0.31,1.5,1.15,0.03,">1 nonsynonymous","R25S G146Y",2
"lib1","SARS-CoV-2","CAAAAAAGGTAAGATT",1,43.33,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C61F G172L K198R",3
"lib1","SARS-CoV-2","CAAAAAAGTAAACCAC",4,33.06,9.51,-1.25,0.18,1.9,1.06,0.01,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","CAAAAAAGTATAGCCG",4,61.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23K S36G N107E L162R",4
"lib1","SARS-CoV-2","CAAAAAAGTGTAAGGG",8,0.86,NA,NA,NA,NA,NA,NA,"stop","A42H S113V Q144* F167A",4
"lib1","SARS-CoV-2","CAAAAAATAAAAAGAG",9,152.18,10.87,0.11,0.08,2.9,1.05,0,">1 nonsynonymous","I28M D90R L122S V173R",4
"lib1","SARS-CoV-2","CAAAAAATACTAGACG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y121R R127N S139*",3
"lib1","SARS-CoV-2","CAAAAAATAGAAATCT",3,35.13,9.36,-1.4,0.13,1.87,1.12,0.01,">1 nonsynonymous","L162N Q168R",2
"lib1","SARS-CoV-2","CAAAAAATTAACACGC",1,37.42,10.7,-0.06,0.07,2.98,1,0,">1 nonsynonymous","L5H K56M",2
"lib1","SARS-CoV-2","CAAAAAATTAATCCGG",1,17.24,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V20G N40Y C49Q Y119K",4
"lib1","SARS-CoV-2","CAAAAAATTACCTACA",5,45.55,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","G51P I80K A192W",3
"lib1","SARS-CoV-2","CAAAAAATTAGAGAAT",13,259.16,10.58,-0.18,0.05,2.86,1.03,0,"1 nonsynonymous","G83A",1
"lib1","SARS-CoV-2","CAAAAAATTATAACAT",2,65.8,10.71,-0.05,0.05,2.96,1.02,0,"1 nonsynonymous","L122D",1
"lib1","SARS-CoV-2","CAAAAAATTGGTAACT",3,24.84,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49R T201M",2
"lib1","SARS-CoV-2","CAAAAAATTTATAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I28V S53*",2
"lib1","SARS-CoV-2","CAAAAAATTTGAATGG",1,46.06,10.28,-0.48,0.1,2.55,1.08,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","CAAAAACAAATCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1I G152*",2
"lib1","SARS-CoV-2","CAAAAACAACATTTAT",4,35.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I72V P177W",2
"lib1","SARS-CoV-2","CAAAAACAAGTGCAAG",4,73.03,10.37,-0.4,0.06,2.92,1,0,"1 nonsynonymous","D34K",1
"lib1","SARS-CoV-2","CAAAAACAATTCTCAT",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L N110R",2
"lib1","SARS-CoV-2","CAAAAACACATTGCAT",4,23.74,6.71,-4.06,0.57,1.5,1.27,0.05,">1 nonsynonymous","T15I S69R N107D P161V",4
"lib1","SARS-CoV-2","CAAAAACACCCCCTTG",5,0.1,NA,NA,NA,NA,NA,NA,"stop","R16C D34N Y165K K198*",4
"lib1","SARS-CoV-2","CAAAAACACGCAATAC",4,76.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11F N30T Q84V Y165V",4
"lib1","SARS-CoV-2","CAAAAACACTTGGACA",12,181.85,10.11,-0.66,0.06,2.73,1.02,0,">1 nonsynonymous","C6T G51R",2
"lib1","SARS-CoV-2","CAAAAACAGGTAATAC",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V F99Y W106D T201Q",4
"lib1","SARS-CoV-2","CAAAAACAGTAACTAA",4,96.48,10.76,0,0.04,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAACATAACAGTG",6,27.84,6,-4.76,1.66,3,1.19,0.01,">1 nonsynonymous","S41H C102H N107T N157L",4
"lib1","SARS-CoV-2","CAAAAACATACGCCCT",3,30.4,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C6E R124T",2
"lib1","SARS-CoV-2","CAAAAACATATATTTT",4,166.71,10.75,-0.02,0.05,2.96,1.01,0,"1 nonsynonymous","P7A",1
"lib1","SARS-CoV-2","CAAAAACATGAAACAA",3,30.37,10.2,-0.56,0.04,2.98,1,0,">1 nonsynonymous","Y39F N107A K114A",3
"lib1","SARS-CoV-2","CAAAAACCAAGGAAAT",1,30.51,10.79,0.02,0.06,2.92,1.05,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","CAAAAACCAGATAACA",4,47.58,10.48,-0.28,0.08,2.94,1.05,0,"1 nonsynonymous","K132I",1
"lib1","SARS-CoV-2","CAAAAACCCAAAGAGT",3,34.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T55E V103M Y159L N171I",4
"lib1","SARS-CoV-2","CAAAAACCCGTCCGAC",1,20.06,9.61,-1.16,0.19,1.51,1.18,0.02,">1 nonsynonymous","G9S S45E P82R",3
"lib1","SARS-CoV-2","CAAAAACCGGCTTCTA",2,24.19,8.53,-2.23,0.16,1.97,1.1,0.01,">1 nonsynonymous","I138Y Y165H",2
"lib1","SARS-CoV-2","CAAAAACGAACCGAGC",8,151.99,10.7,-0.06,0.03,2.91,1.05,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","CAAAAACGACCACATA",1,10.87,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37D G51W S69G F126I C158V",5
"lib1","SARS-CoV-2","CAAAAACGCTAACGAG",1,16.79,9.99,-0.77,0.19,2.75,1,0.01,">1 nonsynonymous","D90L D98Y K198N",3
"lib1","SARS-CoV-2","CAAAAACGCTTCAAAC",4,26.13,10.84,0.08,0.09,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAACGGAATGGAG",9,70.03,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","A42S Y50L G101L N110T E141V Y178L",6
"lib1","SARS-CoV-2","CAAAAACTAAGTCCAT",1,52.99,10.71,-0.05,0.05,2.91,1.05,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","CAAAAACTACAACCAG",3,103.09,10.51,-0.25,0.05,2.9,1.02,0,">1 nonsynonymous","R27W V115T",2
"lib1","SARS-CoV-2","CAAAAACTACCATAGC",3,24.53,8.24,-2.53,0.23,1.51,1.2,0.02,">1 nonsynonymous","A14Q N107K S139V",3
"lib1","SARS-CoV-2","CAAAAACTACTCTAAA",7,23.81,10.54,-0.22,0.06,2.97,1.02,0,"1 nonsynonymous","G174N",1
"lib1","SARS-CoV-2","CAAAAACTATAACGAG",3,2.12,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","CAAAAACTCGTGATAG",7,87.35,10.01,-0.75,0.08,2.35,1.03,0,">1 nonsynonymous","N13G V37G K128L",3
"lib1","SARS-CoV-2","CAAAAACTGATTGAAA",1,19.11,9.76,-1.01,0.23,1.84,1.07,0.03,">1 nonsynonymous","N1K R16F I28V T140P",4
"lib1","SARS-CoV-2","CAAAAACTTAAGAAAC",6,79.95,6.07,-4.69,1.01,1.5,1.17,0.03,">1 nonsynonymous","N64V Q168P Y178L",3
"lib1","SARS-CoV-2","CAAAAAGAATGTGACA",3,33.79,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","Y50P A89R",2
"lib1","SARS-CoV-2","CAAAAAGAATTACACA",1,6.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14P G174V Y178S",3
"lib1","SARS-CoV-2","CAAAAAGAATTGCTCA",5,75.41,8.17,-2.59,0.12,1.8,1.11,0.01,">1 nonsynonymous","G9R L57P L125W F156V",4
"lib1","SARS-CoV-2","CAAAAAGACAGACAAT",9,3.88,NA,NA,NA,NA,NA,NA,"stop","A14* A42C F134I",3
"lib1","SARS-CoV-2","CAAAAAGAGATGTGTA",1,55.07,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","S45Y N157G Y175R",3
"lib1","SARS-CoV-2","CAAAAAGAGTTTGACG",9,150.56,9.87,-0.9,0.05,2.85,1.05,0,">1 nonsynonymous","D90H G174E",2
"lib1","SARS-CoV-2","CAAAAAGATCAGTTAG",1,53.69,10.26,-0.51,0.06,2.79,1.08,0,">1 nonsynonymous","N30M N120G",2
"lib1","SARS-CoV-2","CAAAAAGATTAAGTTT",7,28.58,7.98,-2.78,0.44,1.5,1,0.05,">1 nonsynonymous","V103H T140R",2
"lib1","SARS-CoV-2","CAAAAAGCAACGAACA",4,110.67,9.46,-1.31,0.06,2.89,1.05,0,">1 nonsynonymous","R27V Y119H E135M",3
"lib1","SARS-CoV-2","CAAAAAGCAGTAGTTG",5,84.84,10.83,0.07,0.07,2.93,1.02,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","CAAAAAGCGACTCACT",8,76.98,9.49,-1.27,0.14,1.74,1.1,0.01,">1 nonsynonymous","S19K P54G",2
"lib1","SARS-CoV-2","CAAAAAGCGATACGAT",11,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R T55G K114M",3
"lib1","SARS-CoV-2","CAAAAAGCGGTCAAAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","Y50I L95I Y143* P149T",4
"lib1","SARS-CoV-2","CAAAAAGCTGATGGAG",9,107.62,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4D Y39E S69R V77T D137A",5
"lib1","SARS-CoV-2","CAAAAAGGACCGAGCA",8,34.39,9.69,-1.07,0.07,2.42,1.04,0,">1 nonsynonymous","D59C G83A G155A",3
"lib1","SARS-CoV-2","CAAAAAGGCCAATATA",3,6.91,11.08,0.32,0.47,2.48,1,0.06,">1 nonsynonymous","C6L A33T A81V K87S Y91M T100E",6
"lib1","SARS-CoV-2","CAAAAAGGGACTGGGG",4,45.12,10.19,-0.57,0.06,2.78,1,0,"1 nonsynonymous","S19G",1
"lib1","SARS-CoV-2","CAAAAAGGGGTTGCAA",8,77.35,6.12,-4.64,0.92,1.5,1.21,0.02,">1 nonsynonymous","W23R T63Y R124W T140E",4
"lib1","SARS-CoV-2","CAAAAAGGTATTTTTA",3,21.55,8.57,-2.2,0.3,1.65,1.23,0.07,">1 nonsynonymous","C49I S139G",2
"lib1","SARS-CoV-2","CAAAAAGGTTGAGGCA",6,40.17,6,-4.76,2,1.5,1.34,0.04,"1 nonsynonymous","F70T",1
"lib1","SARS-CoV-2","CAAAAAGTAGGATTCT",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65P S69K",2
"lib1","SARS-CoV-2","CAAAAAGTATCACTAG",5,66.82,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D97R Y119T Y143K Y159T",4
"lib1","SARS-CoV-2","CAAAAAGTATCATACA",3,1.81,NA,NA,NA,NA,NA,NA,"stop","A33L N107G Y175*",3
"lib1","SARS-CoV-2","CAAAAAGTCATTCAAT",2,53.15,10.45,-0.31,0.04,2.94,1.02,0,">1 nonsynonymous","K87I T140I",2
"lib1","SARS-CoV-2","CAAAAAGTCCTAGGAT",5,164.76,9.27,-1.49,0.21,1.5,1.13,0.02,">1 nonsynonymous","T3K L162K",2
"lib1","SARS-CoV-2","CAAAAAGTCTAAAGAA",8,73.89,6,-4.76,0.73,1.5,1.12,0.01,">1 nonsynonymous","I28R Y39A A67T G166R",4
"lib1","SARS-CoV-2","CAAAAAGTGAACTGCA",5,27.62,8.59,-2.17,0.23,1.5,1.09,0.02,">1 nonsynonymous","C61P V103L",2
"lib1","SARS-CoV-2","CAAAAAGTGGTGAGAA",2,7.01,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","CAAAAAGTTCTAACAA",8,2.25,NA,NA,NA,NA,NA,NA,"stop","E10* A33P Y50C T55F T63I K198F",6
"lib1","SARS-CoV-2","CAAAAAGTTTTGGAAC",4,34.49,8.86,-1.9,0.19,1.87,1.14,0.01,"1 nonsynonymous","G86H",1
"lib1","SARS-CoV-2","CAAAAATAACCCGTTT",2,10.14,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V71G",1
"lib1","SARS-CoV-2","CAAAAATACACAGCAG",5,44.8,7.8,-2.97,0.33,1.5,1.14,0.03,">1 nonsynonymous","T140R F156K Y165T",3
"lib1","SARS-CoV-2","CAAAAATACCCACGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42S F62* F99L G152M",4
"lib1","SARS-CoV-2","CAAAAATAGAATCTAA",5,268.47,10.62,-0.15,0.04,2.91,1,0,">1 nonsynonymous","T85K Y178M",2
"lib1","SARS-CoV-2","CAAAAATAGCCGATTC",3,49.49,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R73N G83C Y91I T100D",4
"lib1","SARS-CoV-2","CAAAAATAGGTTCGAA",6,21.15,7.42,-3.34,0.26,1.5,1.04,0.03,">1 nonsynonymous","V11I N24K A67T Y119S F167Y",5
"lib1","SARS-CoV-2","CAAAAATATAAACACA",1,0.97,NA,NA,NA,NA,NA,NA,"stop","Y35* A105N",2
"lib1","SARS-CoV-2","CAAAAATATGCGTCCG",2,37.34,9.61,-1.16,0.06,2.82,1.1,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","CAAAAATCCGTAGATG",3,46.8,10.69,-0.07,0.09,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAATCTTACGCGA",1,8.07,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P7R G86F A105L E141V S164H",5
"lib1","SARS-CoV-2","CAAAAATGAAAATGCG",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","CAAAAATGACTCTGAA",7,237.11,10.07,-0.7,0.07,2.54,1.02,0,">1 nonsynonymous","N4H S45L",2
"lib1","SARS-CoV-2","CAAAAATGATGCAAAC",7,58.44,6.01,-4.75,0.72,1.5,1.15,0.01,">1 nonsynonymous","F44Y P82G T148P Y178F",4
"lib1","SARS-CoV-2","CAAAAATGGAAAAGCC",1,46.57,10.67,-0.09,0.07,3,1,0,">1 nonsynonymous","T63M S200V",2
"lib1","SARS-CoV-2","CAAAAATGTATTAAAA",1,46.19,9.96,-0.81,0.11,2.67,1.01,0,">1 nonsynonymous","C6N K48M P197V",3
"lib1","SARS-CoV-2","CAAAAATTCCATTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10N R16S Y35* G116Y Y123I",5
"lib1","SARS-CoV-2","CAAAAATTGCGTTTAA",3,27.86,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D34H Y50V S69V T85R F156V",5
"lib1","SARS-CoV-2","CAAAACAAAATTTAAA",3,9.67,9.69,-1.08,0.28,1.87,1.21,0.04,">1 nonsynonymous","D90W N107S P197T",3
"lib1","SARS-CoV-2","CAAAACAAACATAACT",2,1.8,NA,NA,NA,NA,NA,NA,"stop","Y35K L131*",2
"lib1","SARS-CoV-2","CAAAACAAAGACCGAA",3,5.17,7.36,-3.41,0.38,1.94,1.22,0.03,">1 nonsynonymous","N120G C158A",2
"lib1","SARS-CoV-2","CAAAACAAATATACTA",1,19.43,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","G74E G83P G155R",3
"lib1","SARS-CoV-2","CAAAACAAATGATCTA",1,25.05,9.02,-1.74,0.08,2.45,1.09,0,">1 nonsynonymous","L5V R73Q D98L",3
"lib1","SARS-CoV-2","CAAAACAAATTGTATG",8,2.66,NA,NA,NA,NA,NA,NA,"stop","E10L A89Y D112* R179M",4
"lib1","SARS-CoV-2","CAAAACAACACCCCCG",3,47.68,10.67,-0.1,0.08,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAACAAGAATAAAT",5,39.89,6.69,-4.08,0.4,1.5,1.07,0.02,">1 nonsynonymous","P54Q D75S S139P",3
"lib1","SARS-CoV-2","CAAAACAAGACCTCAA",2,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R G116S P161F V182A",4
"lib1","SARS-CoV-2","CAAAACAAGATTTTAA",1,69.9,9.95,-0.81,0.08,2.74,1,0,">1 nonsynonymous","I28V K56S S147C",3
"lib1","SARS-CoV-2","CAAAACAATGTTGAAT",5,1.28,NA,NA,NA,NA,NA,NA,"stop","Y35P F47L V153* G174N",4
"lib1","SARS-CoV-2","CAAAACAATTAATGGA",6,108.01,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S43I A145W Y175S F185I",4
"lib1","SARS-CoV-2","CAAAACAATTTCATAT",4,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I I28S F99N E154R",4
"lib1","SARS-CoV-2","CAAAACACAAAAACCG",5,65.27,10.53,-0.23,0.04,2.94,1.03,0,">1 nonsynonymous","I2E C61S F160V",3
"lib1","SARS-CoV-2","CAAAACACACACCTTA",10,125.49,10.53,-0.23,0.04,2.96,1,0,">1 nonsynonymous","A22S C61Y",2
"lib1","SARS-CoV-2","CAAAACACATGATTTA",3,26.19,6.45,-4.31,0.74,1.5,1.09,0.06,">1 nonsynonymous","V11N F167I",2
"lib1","SARS-CoV-2","CAAAACAGCAGAACAC",4,25.75,10.57,-0.19,0.06,2.92,1,0,"1 nonsynonymous","L38V",1
"lib1","SARS-CoV-2","CAAAACAGCGCACCAT",1,11.07,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F8Q V103D F160L",3
"lib1","SARS-CoV-2","CAAAACAGTGATCTAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88W L95E",2
"lib1","SARS-CoV-2","CAAAACATAAATTTTT",5,22.07,10.65,-0.11,0.08,2.93,1.06,0,"1 nonsynonymous","K114Y",1
"lib1","SARS-CoV-2","CAAAACATACGCTATG",2,1.87,NA,NA,NA,NA,NA,NA,"stop","I2S A81G N107*",3
"lib1","SARS-CoV-2","CAAAACATAGTGATGG",13,145.73,10.08,-0.68,0.09,2.67,1.01,0,">1 nonsynonymous","D97L N107R",2
"lib1","SARS-CoV-2","CAAAACATCAAAACGA",4,0.56,NA,NA,NA,NA,NA,NA,"stop","P96Q Y178T V194I S200*",4
"lib1","SARS-CoV-2","CAAAACATCGTATTTG",4,1.55,NA,NA,NA,NA,NA,NA,"stop","R25G L60P W106* K128L",4
"lib1","SARS-CoV-2","CAAAACATGCACACTA",2,32.18,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2F S36M S41A R78H K87A G116K R136G V173F",8
"lib1","SARS-CoV-2","CAAAACATGCCACTGC",4,27.86,9.76,-1.01,0.09,2.69,1.07,0,">1 nonsynonymous","E10T F62W Y121K",3
"lib1","SARS-CoV-2","CAAAACATTAGCTGAC",1,33.08,10.04,-0.73,0.11,2.54,1.02,0,">1 nonsynonymous","T85R P96H S184C",3
"lib1","SARS-CoV-2","CAAAACATTAGTACAC",1,17.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A33E D59L S139W E154L",4
"lib1","SARS-CoV-2","CAAAACCAACATTACT",5,47.47,10.15,-0.61,0.04,2.88,1.05,0,">1 nonsynonymous","N4A R78S Y121N",3
"lib1","SARS-CoV-2","CAAAACCAATGAGACC",6,98.76,8.58,-2.19,0.09,2.94,1.06,0,">1 nonsynonymous","Y143I G174E A192K",3
"lib1","SARS-CoV-2","CAAAACCACCAGAAAG",1,27.29,9.94,-0.82,0.12,2.41,1.17,0.01,">1 nonsynonymous","L5R G9W F134C K198A",4
"lib1","SARS-CoV-2","CAAAACCACTTGTCGT",5,7.8,10.14,-0.62,0.19,2.96,1,0.02,">1 nonsynonymous","Q144L T201V",2
"lib1","SARS-CoV-2","CAAAACCATGGCAAAT",2,9.91,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","K26S Y91V W106V K128Y P133L S139N P149S",7
"lib1","SARS-CoV-2","CAAAACCCAATAATCA",3,41.41,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D59L D90L A145V Q176G",4
"lib1","SARS-CoV-2","CAAAACCCACTTATAG",3,17.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V G86S Y91L",3
"lib1","SARS-CoV-2","CAAAACCCATCCTACT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131Y N151L",2
"lib1","SARS-CoV-2","CAAAACCCGCAATCTT",6,50.3,10.81,0.05,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAACCCGGCTCTAC",3,13.3,7.85,-2.91,0.47,1.5,1,0.07,">1 nonsynonymous","N64Y I72F S139G",3
"lib1","SARS-CoV-2","CAAAACCGAAAACAAT",10,41.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7I I80R",2
"lib1","SARS-CoV-2","CAAAACCGAAACTGTT",10,102.22,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6L S43Y A81T N157V",4
"lib1","SARS-CoV-2","CAAAACCGGAATATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* N64K E135C P197R",4
"lib1","SARS-CoV-2","CAAAACCTAAATAAGT",3,10.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10P R25F P82H F160K",4
"lib1","SARS-CoV-2","CAAAACCTAATCGCGG",3,31.68,6.13,-4.63,1.05,1.5,1.16,0.04,">1 nonsynonymous","P82K Y165A V173L",3
"lib1","SARS-CoV-2","CAAAACCTCGTTAACT",7,69.55,10.57,-0.19,0.04,2.95,1.02,0,">1 nonsynonymous","T100L F156A T201R",3
"lib1","SARS-CoV-2","CAAAACCTGGTAAAGT",3,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S L95T L125R N157G",4
"lib1","SARS-CoV-2","CAAAACCTTCAAATAC",2,41.29,8.92,-1.85,0.23,1.75,1.22,0.02,">1 nonsynonymous","G9C G174A V181L",3
"lib1","SARS-CoV-2","CAAAACCTTTACCGGA",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P N13V K132P N157F S184R",5
"lib1","SARS-CoV-2","CAAAACGAGAGCACTG",3,0.54,NA,NA,NA,NA,NA,NA,"stop","F17V W23* S41D L60S K114I P197H",6
"lib1","SARS-CoV-2","CAAAACGAGATTCAAA",3,37.49,9.53,-1.23,0.08,2.66,1.06,0,">1 nonsynonymous","L57I S164I",2
"lib1","SARS-CoV-2","CAAAACGAGTAATTAC",7,19.09,6.33,-4.43,0.62,1.5,1.14,0.03,"1 nonsynonymous","Y93C",1
"lib1","SARS-CoV-2","CAAAACGATAAAAATT",11,236.11,10.77,0.01,0.05,2.87,1.06,0,"1 nonsynonymous","I138N",1
"lib1","SARS-CoV-2","CAAAACGCCGAACGAT",5,49.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L131R F167A",2
"lib1","SARS-CoV-2","CAAAACGGTAGATACC",7,49.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R I104S V173S",3
"lib1","SARS-CoV-2","CAAAACGTCAATATCC",3,2.14,NA,NA,NA,NA,NA,NA,"stop","K26* N107L L131V",3
"lib1","SARS-CoV-2","CAAAACTAAGAAGACA",5,87.28,7.15,-3.61,0.3,1.5,1.25,0.02,">1 nonsynonymous","Y39G P133A G146I",3
"lib1","SARS-CoV-2","CAAAACTAATAAAAGC",3,65.65,10.74,-0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAACTACATAGTTA",1,3.09,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAAACTACCGTGTGA",4,30.82,7.14,-3.63,0.46,1.5,1.34,0.06,">1 nonsynonymous","I2L D90P F167C",3
"lib1","SARS-CoV-2","CAAAACTAGCATACAG",11,28.99,8.51,-2.25,0.24,1.56,1.17,0.03,">1 nonsynonymous","A42C Y123G L187E S200E",4
"lib1","SARS-CoV-2","CAAAACTAGCTCGATA",2,55.3,10.73,-0.04,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAACTATCTATTGG",2,25.7,10.82,0.06,0.09,2.89,1.08,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","CAAAACTATGCACTTG",3,36.05,9.68,-1.09,0.14,1.92,1.09,0.01,">1 nonsynonymous","Y50N C61Q",2
"lib1","SARS-CoV-2","CAAAACTATTGTATAT",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K Y35M L122H Q176R",4
"lib1","SARS-CoV-2","CAAAACTCGGATTCCA",15,33.78,9.19,-1.57,0.39,1.5,1,0.05,">1 nonsynonymous","A18K L60M V77L T85G D97L I104T G146V T201V",8
"lib1","SARS-CoV-2","CAAAACTGAATTATTC",2,45.04,10.65,-0.11,0.06,2.96,1.03,0,">1 nonsynonymous","S129A T148D",2
"lib1","SARS-CoV-2","CAAAACTGATATTTAT",2,75.77,10.76,-0.01,0.09,2.96,1.01,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","CAAAACTGCTTCTCAC",1,0.65,NA,NA,NA,NA,NA,NA,"stop","Y50P N92R N171*",3
"lib1","SARS-CoV-2","CAAAACTGGAAAGTAA",3,8.23,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3G D98T G116I C150Y C195R",5
"lib1","SARS-CoV-2","CAAAACTGTATAAAAA",1,48.86,10.69,-0.08,0.07,2.99,1,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","CAAAACTGTTCACACG",1,22.94,10.21,-0.56,0.08,2.79,1.13,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","CAAAACTTAAATCAGG",6,808.74,10.15,-0.61,0.04,2.93,1.01,0,"1 nonsynonymous","E154I",1
"lib1","SARS-CoV-2","CAAAACTTAATCACAT",6,272.93,10.01,-0.75,0.06,2.76,1.06,0,"1 nonsynonymous","Q176H",1
"lib1","SARS-CoV-2","CAAAACTTAGCAATCG",3,42.56,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","W23M C61A N107G L131G C158E S184T T201M",7
"lib1","SARS-CoV-2","CAAAACTTCCAACGGC",4,67.94,9.79,-0.97,0.11,2.47,1.07,0.01,">1 nonsynonymous","L57V G116V",2
"lib1","SARS-CoV-2","CAAAACTTTAAAGATA",1,53.07,9.58,-1.18,0.05,2.87,1.09,0,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","CAAAACTTTTTGACCA",1,8.4,10.36,-0.4,0.09,2.87,1,0,">1 nonsynonymous","F44Y R78F L95V",3
"lib1","SARS-CoV-2","CAAAAGAAAATATAGT",3,35.02,9.62,-1.15,0.1,1.84,1.09,0,">1 nonsynonymous","V20A Y165F",2
"lib1","SARS-CoV-2","CAAAAGAAAGACCAAA",10,42.71,6,-4.76,2,3,1.08,0,"1 nonsynonymous","F70N",1
"lib1","SARS-CoV-2","CAAAAGAAATTACCTA",2,10.45,10.73,-0.04,0.08,2.97,1.03,0,"1 nonsynonymous","P54T",1
"lib1","SARS-CoV-2","CAAAAGAAATTATGTC",5,29.79,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15G T55I Y123A L162T",4
"lib1","SARS-CoV-2","CAAAAGAACGCCCCCC",3,38.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12T F99Y Y121P",3
"lib1","SARS-CoV-2","CAAAAGAACGGTAAAA",3,0.58,NA,NA,NA,NA,NA,NA,"stop","T15I R127L R136* L162T",4
"lib1","SARS-CoV-2","CAAAAGAAGATTAATT",2,31.04,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","V37R C102F L111H T148I Q168S H189L",6
"lib1","SARS-CoV-2","CAAAAGACAGAATGCA",4,18.25,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P7N K56L F99T",3
"lib1","SARS-CoV-2","CAAAAGACATGCAGCT",3,49.57,9.93,-0.83,0.11,2.42,1.03,0,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","CAAAAGACTAAGCTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","F99* V103S",2
"lib1","SARS-CoV-2","CAAAAGAGAACAACTG",3,51.88,9.58,-1.19,0.08,2.75,1.08,0,">1 nonsynonymous","S53N G146R",2
"lib1","SARS-CoV-2","CAAAAGAGCGAATGCC",3,104.4,6.13,-4.64,1.03,1.5,1.23,0.04,">1 nonsynonymous","N4M C61R Y175G",3
"lib1","SARS-CoV-2","CAAAAGAGGCAGACTA",4,1.56,NA,NA,NA,NA,NA,NA,"stop","A33V I80R N120L G174L K198*",5
"lib1","SARS-CoV-2","CAAAAGAGGGGATCGT",3,34.65,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","K26R S45L Y50N I138N C150L",5
"lib1","SARS-CoV-2","CAAAAGATACATCTCG",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D L95S K114A Y119L P177F E186I",6
"lib1","SARS-CoV-2","CAAAAGATCCCACTCC",14,189.86,9.31,-1.45,0.11,1.63,1.12,0,">1 nonsynonymous","G9D F17H S36W",3
"lib1","SARS-CoV-2","CAAAAGATCCTAAAAC",4,59.88,6,-4.76,1.49,1.5,1.2,0.01,">1 nonsynonymous","C6K S69M Y93F T100N G166T",5
"lib1","SARS-CoV-2","CAAAAGATGACTCTGA",4,92.46,8.37,-2.39,0.22,1.5,1.15,0.01,">1 nonsynonymous","V65F Y91S Y119P K199N",4
"lib1","SARS-CoV-2","CAAAAGATGATGGAAT",2,15.28,6,-4.76,0.57,3,1.16,0.01,">1 nonsynonymous","V37D F47R P54K R73T I88M W106Y D137G",7
"lib1","SARS-CoV-2","CAAAAGATTAAGCGAT",3,56.58,10.65,-0.11,0.04,2.93,1.04,0,">1 nonsynonymous","Y66N E141G",2
"lib1","SARS-CoV-2","CAAAAGATTCATTGTC",2,25.01,9.75,-1.02,0.03,2.92,1,0,"1 nonsynonymous","N118R",1
"lib1","SARS-CoV-2","CAAAAGATTTGAAAAA",4,51.58,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T15S N58I G166R Q176W",4
"lib1","SARS-CoV-2","CAAAAGCAATGACTGC",1,28.31,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2L F12R L60E R136M",4
"lib1","SARS-CoV-2","CAAAAGCACATCGCCG",1,29.08,9.44,-1.32,0.13,1.68,1.13,0.01,">1 nonsynonymous","F17Q S45H",2
"lib1","SARS-CoV-2","CAAAAGCACGTGGTCT",8,125.19,10.75,-0.02,0.04,2.9,1.04,0,">1 nonsynonymous","G9S G83Y",2
"lib1","SARS-CoV-2","CAAAAGCAGGCATATT",2,9.32,6,-4.76,1.86,3,1.07,0,">1 nonsynonymous","E141F R179Q F185M",3
"lib1","SARS-CoV-2","CAAAAGCAGGCGATTA",5,45.95,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9N Y21A G86T",3
"lib1","SARS-CoV-2","CAAAAGCAGTAATTTG",1,18.17,7.58,-3.18,0.19,2.15,1.04,0.01,"1 nonsynonymous","Y165P",1
"lib1","SARS-CoV-2","CAAAAGCCACAAAATA",8,54.93,8.9,-1.87,0.08,2.72,1.09,0,">1 nonsynonymous","N120P G152H A192E",3
"lib1","SARS-CoV-2","CAAAAGCCATTAGAGG",3,37.93,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35W V115L Y123W P161R V173K",5
"lib1","SARS-CoV-2","CAAAAGCCCCCAAAGG",2,39.58,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L57E L125V V180G",3
"lib1","SARS-CoV-2","CAAAAGCCGAGACTAA",9,127.56,10.47,-0.3,0.05,2.96,1,0,"1 nonsynonymous","G116Y",1
"lib1","SARS-CoV-2","CAAAAGCCTACATCCT",1,5.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99D C102N",2
"lib1","SARS-CoV-2","CAAAAGCGACTCAACC",3,55.72,10.44,-0.33,0.04,2.96,1,0,">1 nonsynonymous","S41F E141G",2
"lib1","SARS-CoV-2","CAAAAGCGAGCAACCG",2,19.24,10.73,-0.03,0.07,2.99,1,0,">1 nonsynonymous","N120E F126M",2
"lib1","SARS-CoV-2","CAAAAGCGCGGGCATT",1,51.29,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F99V Y178N",2
"lib1","SARS-CoV-2","CAAAAGCTCGCAACAT",1,14.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4Y S139M G166R Y175C",4
"lib1","SARS-CoV-2","CAAAAGCTCTAAATCG",1,23.45,8.96,-1.8,0.22,1.53,1.15,0.03,">1 nonsynonymous","D59R D68Y",2
"lib1","SARS-CoV-2","CAAAAGCTGACTAACA",3,54.05,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34A D98G V103M V173N",4
"lib1","SARS-CoV-2","CAAAAGCTTACTAAAG",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E I88F V103A",3
"lib1","SARS-CoV-2","CAAAAGGATACTACCT",3,81.08,10.69,-0.07,0.07,2.81,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAGGCAGCAAAGT",11,105.87,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N24S F62A D112K F185N",4
"lib1","SARS-CoV-2","CAAAAGGGTAAATGGA",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113L R136L G146Q",3
"lib1","SARS-CoV-2","CAAAAGGGTATACGGA",13,175.9,10.62,-0.14,0.04,2.91,1.03,0,">1 nonsynonymous","S41Y R136K",2
"lib1","SARS-CoV-2","CAAAAGGTAATAAATT",5,60.57,10.17,-0.59,0.08,2.7,1,0,">1 nonsynonymous","T55I G116K P191I",3
"lib1","SARS-CoV-2","CAAAAGGTACACATTT",3,38.94,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","I28G S36M Y91I G101M D112W L131S",6
"lib1","SARS-CoV-2","CAAAAGGTTAACAGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","V52Q I88*",2
"lib1","SARS-CoV-2","CAAAAGGTTGAGACTA",1,19.29,10.65,-0.11,0.09,2.95,1.05,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CAAAAGTAAAATGAAT",6,23.38,NA,NA,NA,NA,NA,NA,"stop","G117V Y123E T201*",3
"lib1","SARS-CoV-2","CAAAAGTAACACTGAT",1,18.64,7.99,-2.77,0.23,1.99,1.15,0.02,">1 nonsynonymous","E10C T46P K87M E141D S147P",5
"lib1","SARS-CoV-2","CAAAAGTATATCTTCG",1,5.76,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","P7T Q84F L131R C195S",4
"lib1","SARS-CoV-2","CAAAAGTATTTTAACC",4,68.67,10.82,0.06,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAGTCACACTGAA",4,42.28,6,-4.76,0.95,1.5,1.14,0.01,">1 nonsynonymous","D34C S45I L60R Y91L T148G F160S S200N",7
"lib1","SARS-CoV-2","CAAAAGTCAGCTGTAA",2,15.13,6.25,-4.51,2,3,1.13,0.01,">1 nonsynonymous","S19D C49I",2
"lib1","SARS-CoV-2","CAAAAGTCATTCAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","V71M D97* T140S P149R P197V T201S",6
"lib1","SARS-CoV-2","CAAAAGTGAATAATGA",1,34.7,10.91,0.15,0.14,2.87,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAGTGAATTAAAG",5,62.61,10.68,-0.08,0.06,2.97,1.02,0,"1 nonsynonymous","K114R",1
"lib1","SARS-CoV-2","CAAAAGTGGCTTGTAG",3,25.85,10.54,-0.22,0.07,2.8,1.14,0,"1 nonsynonymous","K26S",1
"lib1","SARS-CoV-2","CAAAAGTGTTGACCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M F99K R127F",3
"lib1","SARS-CoV-2","CAAAAGTTAATCCATA",6,56.64,10.8,0.04,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAGTTATGGTAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N P96Y I104L Q144I P161F",5
"lib1","SARS-CoV-2","CAAAAGTTCAACTGAG",2,28,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Y39K W106G N118D",3
"lib1","SARS-CoV-2","CAAAAGTTTCAGCTGA",9,141.88,10.8,0.03,0.08,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAAAGTTTCCACACA",1,47.06,10.71,-0.06,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAAGTTTTGTTATA",3,57.73,10.7,-0.07,0.06,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATAAAATGAGTC",5,84.18,10.66,-0.11,0.04,2.93,1.05,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","CAAAATAAACAAGAAA",1,42.88,9.89,-0.88,0.13,2.7,1.05,0.01,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","CAAAATAAAGCTCTGA",1,25.57,10.08,-0.69,0.12,2.21,1.08,0.01,"1 nonsynonymous","V181L",1
"lib1","SARS-CoV-2","CAAAATAAATAATTAG",1,17.86,10.16,-0.61,0.12,2.84,1.06,0.01,">1 nonsynonymous","Y35V Y39H T55D N64R N151S",5
"lib1","SARS-CoV-2","CAAAATAAATCCAACC",2,59.61,10.22,-0.54,0.04,2.83,1.04,0,">1 nonsynonymous","T3S A33H D59S N64C A190D",5
"lib1","SARS-CoV-2","CAAAATAACACAACAT",6,41.35,9.97,-0.79,0.14,1.98,1.06,0.01,">1 nonsynonymous","G51P F160Y K199N",3
"lib1","SARS-CoV-2","CAAAATAACAGGAACC",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P N13G S19R S69G Y91V P133T",6
"lib1","SARS-CoV-2","CAAAATAACGAACCTT",4,27.06,6.69,-4.07,0.36,1.5,1.07,0.02,"1 nonsynonymous","V182Y",1
"lib1","SARS-CoV-2","CAAAATAACTTGCTCG",6,39.67,6.22,-4.54,1.05,1.5,1.31,0.04,">1 nonsynonymous","L5T F47G Y66H A89I L111I L188V",6
"lib1","SARS-CoV-2","CAAAATAAGCTATTAA",8,0.6,NA,NA,NA,NA,NA,NA,"stop","E10* D68K G146V Q168K C195F",5
"lib1","SARS-CoV-2","CAAAATAAGTATATGA",2,28.75,10.26,-0.5,0.1,2.69,1.02,0.01,">1 nonsynonymous","T3W A14N K198V",3
"lib1","SARS-CoV-2","CAAAATACAACGTGGA",1,25.49,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S19E L131E F160P",3
"lib1","SARS-CoV-2","CAAAATACAATTCGAA",9,100.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14L A22Q I28M A105E S113W Y143Q Q163K",7
"lib1","SARS-CoV-2","CAAAATACATAACGAC",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167C S184H",2
"lib1","SARS-CoV-2","CAAAATACGCTGCGAC",1,15.4,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F99A W106G N118S",3
"lib1","SARS-CoV-2","CAAAATACTAATTATC",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K Y50H W106A",3
"lib1","SARS-CoV-2","CAAAATACTCACTGCC",3,57.06,6.04,-4.73,0.87,1.5,1.14,0.01,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","CAAAATAGAATGAATG",2,111.39,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G86I N110A P177E",3
"lib1","SARS-CoV-2","CAAAATAGGCCTTAGC",3,59.64,8.89,-1.87,0.18,1.5,1.13,0.01,">1 nonsynonymous","N92S P133K H189D",3
"lib1","SARS-CoV-2","CAAAATAGTAAATCAG",6,16.21,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","N1M E76R Y93R C150S S184T S200K",6
"lib1","SARS-CoV-2","CAAAATAGTGTGTCCA",6,92.42,6.22,-4.54,0.36,1.5,1.14,0.01,">1 nonsynonymous","A14G K48Q I88E E141N",4
"lib1","SARS-CoV-2","CAAAATAGTTATACGA",4,21.05,8.22,-2.54,0.47,1.5,1.01,0.08,">1 nonsynonymous","T46Y V65R P82V Q144M",4
"lib1","SARS-CoV-2","CAAAATAGTTATCCAA",4,52.44,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","C6D G83Y Y165G",3
"lib1","SARS-CoV-2","CAAAATATACATGAAA",5,49.17,10.54,-0.22,0.04,2.95,1.01,0,">1 nonsynonymous","G9V L122V K198I",3
"lib1","SARS-CoV-2","CAAAATATACCAAAAA",2,7.14,11.07,0.31,0.13,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATATCAAACAAC",2,138.06,9.94,-0.83,0.08,2.05,1.04,0,">1 nonsynonymous","A18K Y35W L95T",3
"lib1","SARS-CoV-2","CAAAATATCAATTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2D S43* D90P D97S Y175C",5
"lib1","SARS-CoV-2","CAAAATATCAGCGGGC",3,57.71,6,-4.76,1.6,1.5,1.17,0.01,">1 nonsynonymous","R16P N107W",2
"lib1","SARS-CoV-2","CAAAATATCCATACAA",6,19.91,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C61V G101T T148R",3
"lib1","SARS-CoV-2","CAAAATATCCTGCCGT",2,17.81,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50L D68G G86R A105E",4
"lib1","SARS-CoV-2","CAAAATATTGGGTAAT",8,140.48,10.27,-0.5,0.04,2.84,1.05,0,">1 nonsynonymous","C6F V173E",2
"lib1","SARS-CoV-2","CAAAATCAAAACTAAG",1,12.92,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","P54A C61D P82Q D90V L131N P169A P197A",7
"lib1","SARS-CoV-2","CAAAATCAAGGATAAA",11,35.07,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C49R S129I P149S",3
"lib1","SARS-CoV-2","CAAAATCAATACATGG",3,1.16,NA,NA,NA,NA,NA,NA,"stop","L5W C49G A81* Q176S",4
"lib1","SARS-CoV-2","CAAAATCACAAAAATA",6,65.54,10.63,-0.13,0.06,2.96,1.01,0,">1 nonsynonymous","V37L K132W K198G",3
"lib1","SARS-CoV-2","CAAAATCACCGGAGCA",3,23.05,10.93,0.16,0.06,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATCACTGTGGTC",12,0.17,NA,NA,NA,NA,NA,NA,"stop","D34* N118C",2
"lib1","SARS-CoV-2","CAAAATCATTGGACGG",7,77.32,7.36,-3.4,0.24,1.5,1.18,0.01,">1 nonsynonymous","C6A Y35I N40R L122G Q163P",5
"lib1","SARS-CoV-2","CAAAATCATTTTACGG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","K26A P133*",2
"lib1","SARS-CoV-2","CAAAATCCAAGAGCAG",3,2.5,NA,NA,NA,NA,NA,NA,"stop","A18T T100S N107S Q163*",4
"lib1","SARS-CoV-2","CAAAATCCCCAGTAAA",4,19.7,8.21,-2.55,0.16,1.5,1.08,0.01,">1 nonsynonymous","L122W L162S",2
"lib1","SARS-CoV-2","CAAAATCCCCCGCTAT",4,1.22,NA,NA,NA,NA,NA,NA,"stop","Y50* P96F G101D S129Y",4
"lib1","SARS-CoV-2","CAAAATCCCGGCCAAT",1,5.6,NA,NA,NA,NA,NA,NA,"stop","C49* Q84S A105L",3
"lib1","SARS-CoV-2","CAAAATCGATAAAGGA",1,9.59,10.79,0.02,0.08,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATCGTATTTAAT",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A N92K Y143S F185R",4
"lib1","SARS-CoV-2","CAAAATCTATTTAACT",6,34.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93V Y119M",2
"lib1","SARS-CoV-2","CAAAATCTTCCAGCGG",2,73.37,10.65,-0.11,0.06,2.96,1,0,">1 nonsynonymous","T3K T63M",2
"lib1","SARS-CoV-2","CAAAATCTTTTAGTGA",5,64.51,10.78,0.02,0.07,2.96,1.02,0,">1 nonsynonymous","P54W S129N",2
"lib1","SARS-CoV-2","CAAAATGAAAATATAG",3,1.38,NA,NA,NA,NA,NA,NA,"stop","K56Y D97V W106S K128V F156*",5
"lib1","SARS-CoV-2","CAAAATGAAATAAAAC",1,6.28,8.63,-2.13,0.13,2.71,1.09,0.01,">1 nonsynonymous","K87D Y119R",2
"lib1","SARS-CoV-2","CAAAATGAAATAGAGC",6,58.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5Q G51P G83L Y143W Y178R",5
"lib1","SARS-CoV-2","CAAAATGAAGCCAAAA",11,80.68,9.85,-0.91,0.12,1.95,1.12,0,">1 nonsynonymous","N58S A89V P149L",3
"lib1","SARS-CoV-2","CAAAATGAAGTACTTT",3,52,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D90E G172R",2
"lib1","SARS-CoV-2","CAAAATGACATCCAGC",2,39.29,6,-4.76,2,3,1.21,0,">1 nonsynonymous","V11L A67L V103Y N120S P197G",5
"lib1","SARS-CoV-2","CAAAATGATCAGTCCG",7,15.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M Y165F G174S",3
"lib1","SARS-CoV-2","CAAAATGATCGATTGT",2,27.11,10.27,-0.5,0.11,2.73,1.02,0,">1 nonsynonymous","K48Y L122C",2
"lib1","SARS-CoV-2","CAAAATGATCGATTTA",4,108.5,10.77,0.01,0.06,2.93,1.03,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","CAAAATGATGAGGCGC",5,1.1,NA,NA,NA,NA,NA,NA,"stop","T3* G9E T55L K94L F167P",5
"lib1","SARS-CoV-2","CAAAATGATTCACACC",1,2.84,NA,NA,NA,NA,NA,NA,"stop","G9R S19* C49G T55P D97A I142*",6
"lib1","SARS-CoV-2","CAAAATGCCGCAGATT",6,40.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T55I G86P L95Y",3
"lib1","SARS-CoV-2","CAAAATGGACCCGTAG",1,13.26,9.12,-1.64,0.35,1.5,1,0.04,">1 nonsynonymous","Y39P D98F T148M V180I",4
"lib1","SARS-CoV-2","CAAAATGGTGTGTGAC",2,64.92,10.59,-0.17,0.06,2.9,1.05,0,">1 nonsynonymous","F44W G146A",2
"lib1","SARS-CoV-2","CAAAATGGTTACAAAA",2,33.83,10.23,-0.53,0.06,2.86,1.04,0,">1 nonsynonymous","I142L S164L",2
"lib1","SARS-CoV-2","CAAAATGTAAACAATG",3,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K P149I",2
"lib1","SARS-CoV-2","CAAAATGTACCAATAA",5,73.45,10.33,-0.43,0.05,2.84,1.01,0,">1 nonsynonymous","R27W D59A",2
"lib1","SARS-CoV-2","CAAAATGTAGTAAAAA",1,26.31,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N157S Y165P",2
"lib1","SARS-CoV-2","CAAAATTAAAAGGATG",5,65.1,10.78,0.02,0.08,2.98,1.01,0,"1 nonsynonymous","L188H",1
"lib1","SARS-CoV-2","CAAAATTAAAGATAAA",4,54.2,6.91,-3.86,0.29,1.5,1.09,0.02,">1 nonsynonymous","F12C D98C",2
"lib1","SARS-CoV-2","CAAAATTATAGGCGTT",2,16.51,10.76,-0.01,0.09,2.87,1.09,0,">1 nonsynonymous","L5E F44Y",2
"lib1","SARS-CoV-2","CAAAATTCAAATAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11E V37W N58Q G117F N157*",5
"lib1","SARS-CoV-2","CAAAATTCATTTTGTA",2,6.12,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib1","SARS-CoV-2","CAAAATTCCGTACACT",10,148.43,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","Y21K D34Y N64P N151T",4
"lib1","SARS-CoV-2","CAAAATTCGCTACGCT",5,128.98,6.61,-4.15,0.59,1.5,1.09,0.04,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","CAAAATTCTCAAACCA",1,77.31,10.32,-0.44,0.08,2.74,1,0,">1 nonsynonymous","D97F S129L",2
"lib1","SARS-CoV-2","CAAAATTCTCTACACA",1,42.68,10.7,-0.06,0.1,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATTCTGGTACAA",1,15,8.41,-2.35,0.2,2.72,1.08,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","CAAAATTGAAAAATCA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L G83Y K94E P96H A105D",5
"lib1","SARS-CoV-2","CAAAATTGAGATCCTA",5,81.24,8.83,-1.94,0.14,1.52,1.16,0.01,">1 nonsynonymous","L5W C61Y W106C N120D",4
"lib1","SARS-CoV-2","CAAAATTGCTAAAGCA",1,28.74,8.57,-2.19,0.2,1.92,1.12,0.02,">1 nonsynonymous","S45V A145L",2
"lib1","SARS-CoV-2","CAAAATTGCTCTGAAT",2,38.23,10.75,-0.02,0.05,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAATTGTACTTACC",12,237.43,8.58,-2.18,0.18,1.5,1.06,0.01,">1 nonsynonymous","S36L D137I",2
"lib1","SARS-CoV-2","CAAAATTGTGCAACTG",1,11.38,9.55,-1.21,0.18,1.91,1.2,0.01,">1 nonsynonymous","F12E T63K",2
"lib1","SARS-CoV-2","CAAAATTTAAAGCCTG",4,53.48,10.53,-0.23,0.08,2.96,1.04,0,"1 nonsynonymous","N1F",1
"lib1","SARS-CoV-2","CAAAATTTACTAGAGT",7,48.59,6,-4.76,0.69,1.5,1.11,0,">1 nonsynonymous","L57M G86M D112T",3
"lib1","SARS-CoV-2","CAAAATTTATGATCCT",8,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W T85K",2
"lib1","SARS-CoV-2","CAAAATTTGATTAACA",1,6.22,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","CAAAATTTTCTCTAGA",9,45.94,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","CAAACAAAAAATATGC",4,35.98,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V77S D112A",2
"lib1","SARS-CoV-2","CAAACAAAACCAGCAG",7,9.67,6,-4.76,2,3,1.1,0.03,">1 nonsynonymous","F47C F62R V77M V103S",4
"lib1","SARS-CoV-2","CAAACAAAGTATGTTC",7,70.52,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F8N A18G N151T N157V F167S L187N",6
"lib1","SARS-CoV-2","CAAACAAATACACGAA",2,76.82,10.68,-0.09,0.05,2.9,1.05,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","CAAACAAATGCCAATG",2,17.92,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","D59Q G101N N130T",3
"lib1","SARS-CoV-2","CAAACAAATTAGGTCA",1,84.55,8.6,-2.17,0.07,2.73,1.09,0,">1 nonsynonymous","T3P T55I C61T G117R",4
"lib1","SARS-CoV-2","CAAACAAATTTGAGGG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","A22* S53P I88W N107L Y121T S139I S200R",7
"lib1","SARS-CoV-2","CAAACAACACACCCAC",1,15.64,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14F F44V Y66N V103I",4
"lib1","SARS-CoV-2","CAAACAACACTCTACA",7,57.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L95Y Y143F",2
"lib1","SARS-CoV-2","CAAACAACCAATAACG",2,19.63,9.53,-1.24,0.11,2.72,1.21,0.01,"1 nonsynonymous","G166Q",1
"lib1","SARS-CoV-2","CAAACAACGTAGGTCT",8,111.07,10.68,-0.09,0.03,2.93,1.02,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","CAAACAACTCAACTTA",7,32.22,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","R16W A22P Q84H G86T D98A G152N",6
"lib1","SARS-CoV-2","CAAACAAGACAGCATG",2,37.33,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","N92M I138L",2
"lib1","SARS-CoV-2","CAAACAAGACTAATAC",3,83.15,10.73,-0.03,0.07,2.9,1.07,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","CAAACAAGCGCTCCCT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M S45K S147D L183H",4
"lib1","SARS-CoV-2","CAAACAAGGAAGCCAA",3,80.65,9.98,-0.78,0.06,2.85,1.06,0,">1 nonsynonymous","G9V T170W",2
"lib1","SARS-CoV-2","CAAACAATACGAATTA",1,1.4,NA,NA,NA,NA,NA,NA,"stop","T100G S108*",2
"lib1","SARS-CoV-2","CAAACAATCGAGCCAG",2,75.72,10.74,-0.02,0.06,2.84,1.11,0,">1 nonsynonymous","N130P N151C",2
"lib1","SARS-CoV-2","CAAACAATCGCAAGGG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","T15* I72D G83V Y91C P133L C150G",6
"lib1","SARS-CoV-2","CAAACAATGAGCGGGT",3,3.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102R",1
"lib1","SARS-CoV-2","CAAACAATGAGTTGAT",3,27.59,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G86R V173N Y178R",3
"lib1","SARS-CoV-2","CAAACAATGGTTGGTA",4,31.88,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","Y50P G86H E141N",3
"lib1","SARS-CoV-2","CAAACAATTAGAATAT",9,185.73,10.63,-0.13,0.03,2.95,1.01,0,">1 nonsynonymous","V65L D98T",2
"lib1","SARS-CoV-2","CAAACAATTATAAAAG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D90A S113W R127P",4
"lib1","SARS-CoV-2","CAAACAATTGGCCATG",5,32.22,6.88,-3.89,0.48,1.5,1.12,0.04,">1 nonsynonymous","S53I R73C D90Y S113P",4
"lib1","SARS-CoV-2","CAAACAATTTCTACGA",3,0,NA,NA,NA,NA,NA,NA,"stop","E10L K56L N151* H189R",4
"lib1","SARS-CoV-2","CAAACAATTTTATGAA",1,0.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","CAAACACAAATTTGAA",2,73.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9D Q84M S139Y G146K Y175S",5
"lib1","SARS-CoV-2","CAAACACAAGTAAATA",1,6.07,9.43,-1.34,0.24,2.74,1.04,0.01,">1 nonsynonymous","K132N S139L",2
"lib1","SARS-CoV-2","CAAACACAATACAAGG",2,56.91,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G152I N157H T170L",3
"lib1","SARS-CoV-2","CAAACACAATGGTAAA",6,15.7,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G9Y T55F S113Y Q163N S184Q",5
"lib1","SARS-CoV-2","CAAACACACAGTCCAA",4,113.79,10.38,-0.39,0.04,2.83,1.03,0,">1 nonsynonymous","N13G I138M G196T",3
"lib1","SARS-CoV-2","CAAACACAGGCTATAC",2,28.39,10.71,-0.05,0.06,2.98,1.02,0,"1 nonsynonymous","R27Q",1
"lib1","SARS-CoV-2","CAAACACAGTGAGACA",6,50.32,8.67,-2.09,0.3,1.5,1,0.04,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","CAAACACATATGTGCA",8,86.56,10.84,0.07,0.08,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACACCCCAATTGC",4,62.43,10.66,-0.1,0.06,2.86,1.02,0,">1 nonsynonymous","L5P Y91L P149T",3
"lib1","SARS-CoV-2","CAAACACCTACTCCTG",3,6.88,10.07,-0.7,0.5,1.88,1,0.04,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","CAAACACGAAAAAAAC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","F62P A145* P161S P197Q",4
"lib1","SARS-CoV-2","CAAACACGCTGGGCAA",2,22.84,9.42,-1.35,0.08,2.93,1.04,0,">1 nonsynonymous","G117S T148A",2
"lib1","SARS-CoV-2","CAAACACGGATATGTA",2,37.79,10.38,-0.39,0.07,2.79,1.04,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","CAAACACTACCCTAAT",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F Y143L C158K S200L",4
"lib1","SARS-CoV-2","CAAACACTCACATTTT",4,37.02,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9V L57N Y119I S164M Q168C",5
"lib1","SARS-CoV-2","CAAACACTTACCTTCT",4,58.75,9.78,-0.98,0.07,2.73,1.06,0,">1 nonsynonymous","P149M G152C",2
"lib1","SARS-CoV-2","CAAACACTTCTGGTGC",8,162.81,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S139V Q176S",2
"lib1","SARS-CoV-2","CAAACAGACGCCGAAA",4,17.49,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y50H Y66M N120L S129D Q144H",5
"lib1","SARS-CoV-2","CAAACAGATAACCCGA",1,66.67,10.59,-0.18,0.05,2.91,1.05,0,"1 nonsynonymous","F185Y",1
"lib1","SARS-CoV-2","CAAACAGATAAGATTT",4,41.7,7.21,-3.55,0.31,1.5,1.19,0.02,">1 nonsynonymous","D68M S139L",2
"lib1","SARS-CoV-2","CAAACAGATTACCCAG",2,28.56,10.8,0.03,0.04,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACAGCCAGTCTAG",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M G86R D98Y",3
"lib1","SARS-CoV-2","CAAACAGCTAAGTCAC",3,32.72,8.4,-2.36,0.27,1.5,1.03,0.03,">1 nonsynonymous","R25T L57S",2
"lib1","SARS-CoV-2","CAAACAGGAAGTACAT",2,0.82,NA,NA,NA,NA,NA,NA,"stop","P7* N58L",2
"lib1","SARS-CoV-2","CAAACAGGCACCCACC",9,236.94,8.82,-1.95,0.07,2.89,1.08,0,"1 nonsynonymous","T170D",1
"lib1","SARS-CoV-2","CAAACAGGCGCCCGGA",5,1.83,NA,NA,NA,NA,NA,NA,"stop","I2M T15* F44N Y66E",4
"lib1","SARS-CoV-2","CAAACAGGGCTACACT",4,22.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A18Y A89Y N118M",3
"lib1","SARS-CoV-2","CAAACAGGTATAATAC",1,10.88,6,-4.76,2,1.5,1.07,0.04,">1 nonsynonymous","G51P Y119P P133V",3
"lib1","SARS-CoV-2","CAAACAGTAATGTAAC",4,69.86,10.72,-0.04,0.05,2.88,1,0,">1 nonsynonymous","G9V A192M",2
"lib1","SARS-CoV-2","CAAACAGTACTTTGTA",4,19.96,6.05,-4.71,0.76,1.5,1.11,0.02,"1 nonsynonymous","I72Y",1
"lib1","SARS-CoV-2","CAAACAGTATCTACTT",1,55.99,8.65,-2.11,0.09,3,1.03,0,">1 nonsynonymous","G83M Y159L",2
"lib1","SARS-CoV-2","CAAACAGTCTGTAACC",4,87.34,10.31,-0.46,0.05,2.93,1.07,0,"1 nonsynonymous","F156A",1
"lib1","SARS-CoV-2","CAAACAGTGCTATCCG",6,58.29,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A81M D112Q",2
"lib1","SARS-CoV-2","CAAACATAAAGAACAA",1,44.67,10.18,-0.58,0.06,2.8,1,0,">1 nonsynonymous","D90Y P149L",2
"lib1","SARS-CoV-2","CAAACATAAATTAACG",1,7.37,6.56,-4.21,0.71,1.5,1.19,0.05,">1 nonsynonymous","F99L Y119C E141Q S200K",4
"lib1","SARS-CoV-2","CAAACATAACACCTTA",9,59.24,8.19,-2.57,0.23,1.5,1.08,0.02,">1 nonsynonymous","G86R F160Y",2
"lib1","SARS-CoV-2","CAAACATAACTAGTGC",1,15.06,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T15L N107M R127G",3
"lib1","SARS-CoV-2","CAAACATCCCCTGGGG",7,92.86,7.29,-3.48,0.16,1.92,1.14,0.01,">1 nonsynonymous","I104F Y159R",2
"lib1","SARS-CoV-2","CAAACATCGACACCCA",4,67.18,9.79,-0.98,0.11,2.26,1.06,0,">1 nonsynonymous","G51A N120F S129N",3
"lib1","SARS-CoV-2","CAAACATCTAGAAAAA",6,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A A105K",2
"lib1","SARS-CoV-2","CAAACATGAACCTCTT",16,209.8,10.22,-0.54,0.04,2.81,1.03,0,"1 nonsynonymous","Y66K",1
"lib1","SARS-CoV-2","CAAACATGAGAGCAAA",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116M D137T",2
"lib1","SARS-CoV-2","CAAACATGTAAGTACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","CAAACATTAATGGGAG",2,6.06,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T85P F99V Q144S",3
"lib1","SARS-CoV-2","CAAACATTCGGTAACA",4,71.92,8.76,-2.01,0.08,2.57,1.1,0,">1 nonsynonymous","D97E A105Y L125H",3
"lib1","SARS-CoV-2","CAAACATTGGAGCACA",8,59.13,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S43T W106T F167M",3
"lib1","SARS-CoV-2","CAAACATTTGCATTTA",4,39.86,10.49,-0.28,0.14,2.83,1.15,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CAAACCAAAACTCTTG",2,0.19,NA,NA,NA,NA,NA,NA,"stop","Y143* K198*",2
"lib1","SARS-CoV-2","CAAACCAAAAGGAGCG",9,47.33,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T55S G101N",2
"lib1","SARS-CoV-2","CAAACCAAACGACTGC",4,85.05,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28M W106L Y165N V173T",4
"lib1","SARS-CoV-2","CAAACCAAATTTGCCC",10,105.94,10.1,-0.66,0.1,2.15,1.06,0,">1 nonsynonymous","D90E F134R G196M",3
"lib1","SARS-CoV-2","CAAACCAAGACTTGCA",6,0.12,NA,NA,NA,NA,NA,NA,"stop","Y66* N130Y G146M",3
"lib1","SARS-CoV-2","CAAACCAAGTGACTAA",4,27.96,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P96Y Q168C",2
"lib1","SARS-CoV-2","CAAACCAATCTGTTAA",1,3.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169I",1
"lib1","SARS-CoV-2","CAAACCACATATTTTA",2,18.43,10.8,0.03,0.05,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACCACCGACTCGT",1,35.9,8.09,-2.67,0.41,1.5,1,0.07,">1 nonsynonymous","Y35A E76V W106M",3
"lib1","SARS-CoV-2","CAAACCACGAACTACA",1,27.88,10.2,-0.57,0.07,2.79,1,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","CAAACCACGCTTATAT",8,156.37,10.79,0.02,0.05,2.9,1.03,0,">1 nonsynonymous","D97K L187S",2
"lib1","SARS-CoV-2","CAAACCACGGACATTA",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23F S41R C61F P177K",4
"lib1","SARS-CoV-2","CAAACCACGTCTAAAA",4,4.65,NA,NA,NA,NA,NA,NA,"stop","C6W S129*",2
"lib1","SARS-CoV-2","CAAACCAGGATCCCGG",2,8.17,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","T15V N130L Y165A V180M K199I",5
"lib1","SARS-CoV-2","CAAACCAGTCATATAT",5,48.66,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y50P T85G V103T A145S",4
"lib1","SARS-CoV-2","CAAACCATCGGATTCG",2,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y S69V Y93T",3
"lib1","SARS-CoV-2","CAAACCATGTCGGCAA",3,42.21,6,-4.76,1.78,1.5,1.05,0,"1 nonsynonymous","P177F",1
"lib1","SARS-CoV-2","CAAACCATTCTAATGT",2,13.49,9.45,-1.31,0.23,2.25,1,0.03,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","CAAACCCAGTCATTCA",4,46.23,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N58T C102S R124A I142E Q176Y",5
"lib1","SARS-CoV-2","CAAACCCCAAAGATGG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","S41P Y119* E135A",3
"lib1","SARS-CoV-2","CAAACCCCACTATGAC",12,40.32,6.15,-4.62,1.12,1.5,1.18,0.03,">1 nonsynonymous","Y50S D97I Q163P",3
"lib1","SARS-CoV-2","CAAACCCGGACCATAG",1,14.23,9.9,-0.87,0.23,2.31,1.06,0.02,">1 nonsynonymous","Y35N S41A G116S T148S N171T",5
"lib1","SARS-CoV-2","CAAACCCGGCTCATAG",1,39.67,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86V D98P L125A L188E T201R",5
"lib1","SARS-CoV-2","CAAACCCTCCTTAGGC",3,12.15,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N4A K48V S129D D137T",4
"lib1","SARS-CoV-2","CAAACCCTCGAATTAC",10,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S36H I80R L95R V103R L122A S139L L162R N171C",9
"lib1","SARS-CoV-2","CAAACCGACCATTAAG",16,131.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64M T100S G152N F167Q",4
"lib1","SARS-CoV-2","CAAACCGAGTCCACTA",3,27.26,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K56Y F99Y R124N N171L K198P",5
"lib1","SARS-CoV-2","CAAACCGCGCGAAAAA",8,11.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G86D P96S A190S",3
"lib1","SARS-CoV-2","CAAACCGCGTATTACC",6,73.32,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4D A105N I142M T148S Y175N",5
"lib1","SARS-CoV-2","CAAACCGCTACTAGTA",6,120.75,10.67,-0.1,0.07,2.91,1,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","CAAACCGGCCGATACT",3,15.91,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","C61I P96L I142M",3
"lib1","SARS-CoV-2","CAAACCGGTGGGGTCG",2,47.92,8.71,-2.05,0.14,2.5,1.15,0.01,">1 nonsynonymous","S41G T46N N120E Y143V",4
"lib1","SARS-CoV-2","CAAACCGTAAGTAAAG",4,36.25,10.72,-0.04,0.06,2.89,1.07,0,">1 nonsynonymous","N1S D90S",2
"lib1","SARS-CoV-2","CAAACCGTGATACACT",8,316.47,10.58,-0.18,0.04,2.9,1.05,0,">1 nonsynonymous","Y123S T148R",2
"lib1","SARS-CoV-2","CAAACCGTGTGATTAC",3,32.23,10.21,-0.55,0.06,2.9,1,0,">1 nonsynonymous","F62G K87N",2
"lib1","SARS-CoV-2","CAAACCTAAATGTACT",7,1.76,NA,NA,NA,NA,NA,NA,"stop","V37P Y119* E154*",3
"lib1","SARS-CoV-2","CAAACCTAACCGGTAG",3,41.43,10,-0.76,0.14,2.29,1.04,0.01,">1 nonsynonymous","G9V S36R N58T Q144T",4
"lib1","SARS-CoV-2","CAAACCTAAGCCAATT",6,27.71,6,-4.76,2,1.5,1.35,0.05,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","CAAACCTACCCTGCCA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184R",1
"lib1","SARS-CoV-2","CAAACCTAGTCTAAAA",2,19.96,9.8,-0.97,0.14,1.86,1.13,0.01,">1 nonsynonymous","C61L T100D P149Q",3
"lib1","SARS-CoV-2","CAAACCTATCACAAAA",1,8.68,10.85,0.09,0.14,2.92,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CAAACCTATGAGTTGA",4,35.87,8.93,-1.84,0.22,1.5,1.17,0.03,">1 nonsynonymous","D112F L122S F160A",3
"lib1","SARS-CoV-2","CAAACCTATGCCATCA",5,63.74,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R27P F99S N107L G155H",4
"lib1","SARS-CoV-2","CAAACCTCCAAAAAAT",5,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I Y121L L131R N151P G174K",5
"lib1","SARS-CoV-2","CAAACCTCGATACACT",2,28.48,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V20E K87S P96M Y119E N171M H189F",6
"lib1","SARS-CoV-2","CAAACCTGAGGTGACT",1,9.55,8.88,-1.88,0.26,2.56,1.15,0.03,">1 nonsynonymous","A42T T85D D97I Y119D",4
"lib1","SARS-CoV-2","CAAACCTGGCTATAAG",3,44,6.32,-4.44,0.79,1.5,1.22,0.04,"1 nonsynonymous","Y159T",1
"lib1","SARS-CoV-2","CAAACCTGTGTGCCCA",5,44.27,6,-4.76,2,1.5,1.35,0.04,"1 nonsynonymous","I88W",1
"lib1","SARS-CoV-2","CAAACCTTAATCGCTG",3,78.76,10.85,0.09,0.08,2.91,1.05,0,">1 nonsynonymous","A105S K199P",2
"lib1","SARS-CoV-2","CAAACCTTACTATAGG",1,35.82,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6R V20C T85P A105K",4
"lib1","SARS-CoV-2","CAAACCTTATAGCTCT",3,31.13,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N4I C49L E141K",3
"lib1","SARS-CoV-2","CAAACCTTCAGTCGAC",10,97.56,10.48,-0.28,0.05,2.89,1.02,0,">1 nonsynonymous","C61S K94R N120R K128D",4
"lib1","SARS-CoV-2","CAAACCTTTGCCAGCG",1,35.65,10.91,0.14,0.08,2.99,1,0,">1 nonsynonymous","N40R F160S",2
"lib1","SARS-CoV-2","CAAACCTTTTCAATGC",3,16.28,8.45,-2.31,0.22,2.05,1.18,0.02,">1 nonsynonymous","G9S A105Y E154Y",3
"lib1","SARS-CoV-2","CAAACGAAAACGCCTC",9,255.24,9.2,-1.57,0.08,2.44,1.13,0,">1 nonsynonymous","D98L K132T P149R G166A",4
"lib1","SARS-CoV-2","CAAACGAACTATTAAT",3,115.52,9.55,-1.21,0.06,2.83,1.09,0,">1 nonsynonymous","S43A G117S T201S",3
"lib1","SARS-CoV-2","CAAACGAAGCTGTGGT",4,100.94,10.8,0.03,0.06,2.95,1.03,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","CAAACGAATAAAGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6S P133* S184Y",3
"lib1","SARS-CoV-2","CAAACGAATGCTCGAA",3,45.18,8.22,-2.55,0.14,2.36,1.13,0.01,">1 nonsynonymous","G9R K26Y Y175Q",3
"lib1","SARS-CoV-2","CAAACGACCAATTATT",3,9.53,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","G101T V173S T201S",3
"lib1","SARS-CoV-2","CAAACGACCCTTCCCG",8,64.21,8.95,-1.81,0.17,1.5,1.1,0.01,">1 nonsynonymous","P54D E135A Y178C",3
"lib1","SARS-CoV-2","CAAACGACGCAATCCC",11,178.7,10.57,-0.19,0.04,2.9,1.02,0,">1 nonsynonymous","S43F G83A",2
"lib1","SARS-CoV-2","CAAACGAGAAAACTCT",8,111.28,10.26,-0.5,0.06,2.82,1.01,0,">1 nonsynonymous","K94Q T201R",2
"lib1","SARS-CoV-2","CAAACGAGAAACGAGC",2,83.92,10.78,0.01,0.03,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACGAGATATAAAT",18,280.98,9.85,-0.92,0.04,2.85,1.06,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","CAAACGATAAACCAAA",1,16.74,10.57,-0.2,0.06,2.86,1.11,0,">1 nonsynonymous","P54Y K199M",2
"lib1","SARS-CoV-2","CAAACGATCCAATAAT",5,22.9,9.44,-1.33,0.24,1.68,1.17,0.02,">1 nonsynonymous","F47R F62P",2
"lib1","SARS-CoV-2","CAAACGATCTTGACTG",3,10.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41L A42D K128S E154S P161R",5
"lib1","SARS-CoV-2","CAAACGATTTCAAATC",2,5.79,9.3,-1.47,0.32,1.5,1,0.06,">1 nonsynonymous","T85A V103L",2
"lib1","SARS-CoV-2","CAAACGCAAACGTTGG",1,28.08,9.66,-1.1,0.09,2.07,1.05,0,">1 nonsynonymous","G9R S19K",2
"lib1","SARS-CoV-2","CAAACGCAGCAGTACG",1,22.61,6.75,-4.02,0.46,1.5,1.13,0.02,">1 nonsynonymous","S19D C61Y P96T",3
"lib1","SARS-CoV-2","CAAACGCATATGTGAG",3,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98N V103M R127S",3
"lib1","SARS-CoV-2","CAAACGCCCTTCTCCA",4,17.73,8.04,-2.72,0.44,1.5,1,0.06,">1 nonsynonymous","S19R K48D P149S",3
"lib1","SARS-CoV-2","CAAACGCGGAGTAAAT",2,30.06,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","R25E Q176P",2
"lib1","SARS-CoV-2","CAAACGCTATATATGG",5,75.26,9.78,-0.98,0.08,2.61,1.01,0,">1 nonsynonymous","C31L P149S Q163H",3
"lib1","SARS-CoV-2","CAAACGCTATCATATG",4,29.5,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","Y66T K94Y P133S G174S F185I",5
"lib1","SARS-CoV-2","CAAACGCTCAAGTCAA",6,29.1,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C49P V103Y P133S",3
"lib1","SARS-CoV-2","CAAACGCTCTATATAA",1,11.38,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","CAAACGCTGTCCCCCT",1,16.78,6.78,-3.99,0.26,1.88,1.21,0.02,">1 nonsynonymous","T63Y K87R S139P",3
"lib1","SARS-CoV-2","CAAACGGAAAAAACAA",7,1.85,NA,NA,NA,NA,NA,NA,"stop","K87Y N118* T140G",3
"lib1","SARS-CoV-2","CAAACGGACAGCCTCT",6,2.67,NA,NA,NA,NA,NA,NA,"stop","V52S P82Y I104V L122W C150S E154L Y175*",7
"lib1","SARS-CoV-2","CAAACGGATTAAAACC",3,0,NA,NA,NA,NA,NA,NA,"stop","N40F Y93E T100A A105*",4
"lib1","SARS-CoV-2","CAAACGGGTTAAAAGT",4,15.46,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6F L60F V71C L122A S129I",5
"lib1","SARS-CoV-2","CAAACGTAATATAAAT",9,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47G G101D L125P A145R",4
"lib1","SARS-CoV-2","CAAACGTACCAAATAC",1,8.46,10.75,-0.01,0.06,2.61,1.35,0,">1 nonsynonymous","V37G T55R P197T",3
"lib1","SARS-CoV-2","CAAACGTACTTGAGAC",2,66.9,9.45,-1.31,0.08,2.83,1.09,0,">1 nonsynonymous","K114E L122K K128V N157S",4
"lib1","SARS-CoV-2","CAAACGTAGCCCTGGT",1,33.66,10.29,-0.47,0.07,2.78,1.09,0,">1 nonsynonymous","S43P K48I D97S N110M",4
"lib1","SARS-CoV-2","CAAACGTCCTAAGGAA",5,1.26,NA,NA,NA,NA,NA,NA,"stop","E10V A22D P133* A145I P149S",5
"lib1","SARS-CoV-2","CAAACGTGAAGACGAC",1,12.81,10.25,-0.52,0.11,2.88,1,0.01,">1 nonsynonymous","T15D C61R F160L",3
"lib1","SARS-CoV-2","CAAACGTGATTACATT",2,57.68,10.91,0.15,0.08,2.92,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAACGTGCTTATACC",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F D90R N120T E135W",4
"lib1","SARS-CoV-2","CAAACGTTAGGAGAAG",3,17.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P149I L162R",2
"lib1","SARS-CoV-2","CAAACGTTCCTTAACT",11,3.14,NA,NA,NA,NA,NA,NA,"stop","D59* A105Y",2
"lib1","SARS-CoV-2","CAAACTAAAAACAATG",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F C61W D98M E154T",4
"lib1","SARS-CoV-2","CAAACTAACACATCAT",2,26.81,10.85,0.09,0.09,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACTAACGTCCTTA",1,5.35,10.1,-0.66,0.23,2.99,1,0.01,">1 nonsynonymous","P7S L57G",2
"lib1","SARS-CoV-2","CAAACTAAGGCAGTCA",2,1.75,NA,NA,NA,NA,NA,NA,"stop","R16S P82* C102L",3
"lib1","SARS-CoV-2","CAAACTAATTTTAGCA",4,57.58,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F12S Q84W L95F G174L",4
"lib1","SARS-CoV-2","CAAACTACGACAAAGC",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20C L60N V103P",3
"lib1","SARS-CoV-2","CAAACTACGCGAGGAT",1,14.68,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G9S C31H A42P C49D T63L G86M",6
"lib1","SARS-CoV-2","CAAACTACGGCTTCAC",5,43.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I88F Y165V",2
"lib1","SARS-CoV-2","CAAACTAGGGATGATG",14,284.7,10.81,0.04,0.06,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAACTATACAAACGA",9,131.09,10.65,-0.12,0.04,2.87,1.03,0,">1 nonsynonymous","P7T T201V",2
"lib1","SARS-CoV-2","CAAACTATACTCATGT",2,16.61,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V11N F167R",2
"lib1","SARS-CoV-2","CAAACTATGCATCCCT",1,43.18,10.69,-0.08,0.08,2.83,1.14,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","CAAACTATGCCTCACA",5,15.26,6,-4.76,1.9,1.5,1.14,0.03,">1 nonsynonymous","V11G G51A A190P",3
"lib1","SARS-CoV-2","CAAACTATTATCTACG",4,52.17,10.19,-0.57,0.05,2.91,1.02,0,">1 nonsynonymous","G152K G166A",2
"lib1","SARS-CoV-2","CAAACTCAAACATGGA",4,42.09,10.69,-0.08,0.05,2.89,1.07,0,">1 nonsynonymous","S53I C61T L122V",3
"lib1","SARS-CoV-2","CAAACTCAATACCGAT",7,8.04,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13L I104S I142M",3
"lib1","SARS-CoV-2","CAAACTCACACAAAGT",1,6.71,9.68,-1.08,0.15,1.93,1.09,0.01,">1 nonsynonymous","T85S P96C L188P",3
"lib1","SARS-CoV-2","CAAACTCATCTAGTGA",9,127.24,8.31,-2.46,0.12,1.92,1.09,0.01,">1 nonsynonymous","E10R D90H T170N K198Y",4
"lib1","SARS-CoV-2","CAAACTCATGAGTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37N K114* P149L",3
"lib1","SARS-CoV-2","CAAACTCGACGGATAT",5,44.96,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F44C C61G R179Y",3
"lib1","SARS-CoV-2","CAAACTCGCAACATTT",7,94.29,9.16,-1.6,0.09,2.63,1.14,0,">1 nonsynonymous","C61I G83R P169C",3
"lib1","SARS-CoV-2","CAAACTCGGGCGTAGT",3,66.89,10.74,-0.03,0.06,2.84,1.06,0,"1 nonsynonymous","T3G",1
"lib1","SARS-CoV-2","CAAACTCTAAAAACAA",3,53.34,10.45,-0.32,0.05,2.94,1.02,0,">1 nonsynonymous","D97S S147K P149H",3
"lib1","SARS-CoV-2","CAAACTCTCTCACTTG",17,247.87,10.76,0,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACTCTGCCAAATG",4,45.36,6.27,-4.49,0.65,1.5,1.12,0.03,">1 nonsynonymous","A14C A42R P82L P149R G166I",5
"lib1","SARS-CoV-2","CAAACTCTTGAACTAG",5,14.52,6.71,-4.06,0.49,1.5,1.11,0.03,">1 nonsynonymous","S45Y D90C V103D Y165A",4
"lib1","SARS-CoV-2","CAAACTGAAATTCAAC",5,66.97,10.42,-0.35,0.05,2.9,1.04,0,">1 nonsynonymous","T100Y G152V S200I",3
"lib1","SARS-CoV-2","CAAACTGAAGCGACCC",3,44.68,9.05,-1.72,0.17,1.6,1.16,0.01,">1 nonsynonymous","D59Q L131S",2
"lib1","SARS-CoV-2","CAAACTGACCGTCTAT",13,106.5,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","P7R G83L Y165A",3
"lib1","SARS-CoV-2","CAAACTGCATAGTTCT",8,75.29,10.81,0.05,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAACTGCCAAGTCAT",1,58.6,10.7,-0.06,0.06,2.93,1.03,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","CAAACTGGACCATCAT",1,5.89,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","F167E",1
"lib1","SARS-CoV-2","CAAACTGGATCGCACA",9,87.78,6,-4.76,1.12,1.5,1.2,0.02,">1 nonsynonymous","I28L N40R K48C P96A V103E",5
"lib1","SARS-CoV-2","CAAACTGGGCGTACGC",2,1.94,NA,NA,NA,NA,NA,NA,"stop","D34E I88* F126N P149S G155K",5
"lib1","SARS-CoV-2","CAAACTGTACAACAAC",7,8.38,NA,NA,NA,NA,NA,NA,"stop","G83* D97Y",2
"lib1","SARS-CoV-2","CAAACTTAAAGACTGG",5,90.31,10.57,-0.19,0.05,2.9,1.07,0,">1 nonsynonymous","N4F T201A",2
"lib1","SARS-CoV-2","CAAACTTAAGTTGACA",7,28.99,7.23,-3.53,0.24,1.5,1.11,0.02,">1 nonsynonymous","D137N E154Y",2
"lib1","SARS-CoV-2","CAAACTTCAAGCCAGT",1,7.34,10.81,0.05,0.13,2.8,1,0,">1 nonsynonymous","G9R Y39R D90Q",3
"lib1","SARS-CoV-2","CAAACTTCATAGAATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M D59T W106L",3
"lib1","SARS-CoV-2","CAAACTTGCGGGCCCC",2,64.76,8.91,-1.85,0.18,1.64,1.15,0.01,">1 nonsynonymous","C49T V115S K199M",3
"lib1","SARS-CoV-2","CAAACTTTCTTCGGTA",1,9.27,9.36,-1.41,0.31,1.54,1.21,0.05,">1 nonsynonymous","G51Y G155C Q163K",3
"lib1","SARS-CoV-2","CAAAGAAAAAACTTGG",18,147.24,7.97,-2.79,0.19,1.5,1.11,0.01,">1 nonsynonymous","V52R F62Y Q168L",3
"lib1","SARS-CoV-2","CAAAGAAAAAGAACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45M K56*",2
"lib1","SARS-CoV-2","CAAAGAAAACCCACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T85* F167N",2
"lib1","SARS-CoV-2","CAAAGAAAATATGATA",4,41.43,9.39,-1.38,0.08,2.81,1.11,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","CAAAGAAAATTTCTAT",5,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S I104D D112P E141L Q163S",5
"lib1","SARS-CoV-2","CAAAGAAACAACAACT",1,37.63,9.32,-1.44,0.15,2.63,1.08,0.01,">1 nonsynonymous","S45R D75E G174L",3
"lib1","SARS-CoV-2","CAAAGAAACCTACCTA",4,29.79,8.36,-2.41,0.22,1.57,1.17,0.02,">1 nonsynonymous","G86C P191R",2
"lib1","SARS-CoV-2","CAAAGAAACTCCAATA",8,225.91,10.24,-0.52,0.04,2.86,1,0,">1 nonsynonymous","D59L S129D A145V",3
"lib1","SARS-CoV-2","CAAAGAACAAGGGACA",4,35.62,9.66,-1.11,0.16,2.02,1.17,0.01,">1 nonsynonymous","S53N L162R",2
"lib1","SARS-CoV-2","CAAAGAACAGTTTACT",1,1.39,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","CAAAGAACATATGCCA",6,28.66,6.68,-4.09,0.45,1.5,1.2,0.02,">1 nonsynonymous","A14M Y35P L38I Y91R D97N",5
"lib1","SARS-CoV-2","CAAAGAACATGATATA",3,22.77,6,-4.76,1.6,1.5,1.12,0.01,">1 nonsynonymous","G9L S41D Y93W I138S",4
"lib1","SARS-CoV-2","CAAAGAACGACTGTGT",3,2.78,NA,NA,NA,NA,NA,NA,"stop","A18Y K48L F70Y K132* P149I Y178G",6
"lib1","SARS-CoV-2","CAAAGAAGAAAGAGTT",4,36.83,10.6,-0.16,0.07,2.93,1,0,"1 nonsynonymous","F44G",1
"lib1","SARS-CoV-2","CAAAGAAGAGATTCAT",8,115.07,10.12,-0.65,0.07,2.75,1,0,">1 nonsynonymous","N107G K114R P197E",3
"lib1","SARS-CoV-2","CAAAGAATAATATAGC",5,47.11,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F134C C150V F160R V181L",4
"lib1","SARS-CoV-2","CAAAGAATAGTCCACT",5,31.7,9.78,-0.98,0.11,2.27,1.07,0,">1 nonsynonymous","T15L F44Y Y121I",3
"lib1","SARS-CoV-2","CAAAGAATGCAAAAAT",4,90.66,10.74,-0.02,0.04,2.91,1.03,0,">1 nonsynonymous","Y66C N130R F160N",3
"lib1","SARS-CoV-2","CAAAGAATTAATAGTA",4,21.24,8.44,-2.33,0.17,1.7,1.16,0.02,">1 nonsynonymous","E10V N64K S139F",3
"lib1","SARS-CoV-2","CAAAGACAAGTAATTT",9,51.89,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C61G R136G F156N R179L",4
"lib1","SARS-CoV-2","CAAAGACAATAAAGTA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E A42Y D98P R124S D137S",5
"lib1","SARS-CoV-2","CAAAGACATGAGTGCA",1,44.23,8.19,-2.57,0.17,1.82,1.13,0.01,">1 nonsynonymous","Q144R P169V Y178C",3
"lib1","SARS-CoV-2","CAAAGACCACGATGAT",3,7.23,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C6W A105R T170Y V181H",4
"lib1","SARS-CoV-2","CAAAGACCATATAACC",2,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L T63Y V103E",3
"lib1","SARS-CoV-2","CAAAGACCATTTTCCT",4,149.64,9.78,-0.99,0.09,1.95,1.07,0,">1 nonsynonymous","A22R T100Q E135V K199C",4
"lib1","SARS-CoV-2","CAAAGACGAGCCTTCA",8,88.77,6,-4.76,1.69,1.5,1.19,0.01,">1 nonsynonymous","Y66P T148V A190E",3
"lib1","SARS-CoV-2","CAAAGACGGGGTCATT",2,10.47,7.58,-3.19,0.44,1.5,1.11,0.06,">1 nonsynonymous","G74V Q84W P96M R136L G172W",5
"lib1","SARS-CoV-2","CAAAGACGTTTTGTAG",1,11.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K Y143K",2
"lib1","SARS-CoV-2","CAAAGACTATCCCCGA",1,0.5,NA,NA,NA,NA,NA,NA,"stop","A22* T63A",2
"lib1","SARS-CoV-2","CAAAGACTCCCTGAAA",3,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L L60G D112L K199P",4
"lib1","SARS-CoV-2","CAAAGACTGCAAAACC",4,55.69,6,-4.76,0.68,1.5,1.12,0.01,">1 nonsynonymous","E10C K48P Y121C V173H K198M",5
"lib1","SARS-CoV-2","CAAAGACTTAGGTCTT",2,1.41,NA,NA,NA,NA,NA,NA,"stop","I2S N13S Y50F K56L P169T K199*",6
"lib1","SARS-CoV-2","CAAAGAGAAAAGCCCT",5,42.76,10.14,-0.63,0.06,2.93,1.02,0,">1 nonsynonymous","K56T T63F C195Y",3
"lib1","SARS-CoV-2","CAAAGAGACCTATAAT",1,45.34,10.09,-0.68,0.09,2.57,1.03,0,">1 nonsynonymous","S41F T100M A105M",3
"lib1","SARS-CoV-2","CAAAGAGAGGTTGAAA",4,14.83,10.66,-0.11,0.08,2.98,1.02,0,"1 nonsynonymous","A190F",1
"lib1","SARS-CoV-2","CAAAGAGCCAAAGGGG",1,3.33,NA,NA,NA,NA,NA,NA,"stop","N4* L38R Y93T",3
"lib1","SARS-CoV-2","CAAAGAGGCAAGTTCA",3,22.79,7.65,-3.12,0.52,1.5,1.14,0.07,">1 nonsynonymous","N4G N40L F47K V103F",4
"lib1","SARS-CoV-2","CAAAGAGTAGGTCAAT",1,9.34,10.73,-0.04,0.05,2.95,1.04,0,">1 nonsynonymous","W106M N130V P197L",3
"lib1","SARS-CoV-2","CAAAGAGTTGATCTAT",5,196.73,9.78,-0.99,0.09,2.23,1.04,0,">1 nonsynonymous","L60S V115L Y178S",3
"lib1","SARS-CoV-2","CAAAGATAAAACTCTG",5,47.68,8.22,-2.54,0.35,1.5,1.14,0.04,">1 nonsynonymous","L5T A89L",2
"lib1","SARS-CoV-2","CAAAGATAAACCTAAA",4,31.5,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I88Y K199P",2
"lib1","SARS-CoV-2","CAAAGATAAGAACATA",3,77.59,10.79,0.02,0.05,2.89,1.06,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","CAAAGATAATTGAGCA",3,70.74,10.66,-0.1,0.07,2.83,1.1,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","CAAAGATACAAATCCA",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K T55C T85P L122H P161L Q168N K199Y",7
"lib1","SARS-CoV-2","CAAAGATACATAACAG",12,64.12,9.57,-1.2,0.05,2.84,1.06,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","CAAAGATAGACCATTC",7,152.83,8.92,-1.84,0.08,2.6,1.08,0,">1 nonsynonymous","Q84L S129D N171G",3
"lib1","SARS-CoV-2","CAAAGATATACTATTC",2,58.86,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","E10Q K56F P82A P149L N157V",5
"lib1","SARS-CoV-2","CAAAGATATTAGGAAT",1,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K S139I",2
"lib1","SARS-CoV-2","CAAAGATCCGTTACAA",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R I28S K56C I80M D98Y F160I",6
"lib1","SARS-CoV-2","CAAAGATCTACAATTG",14,89.81,6,-4.76,1.6,1.5,1.19,0.01,">1 nonsynonymous","P7Q V65S I80V F99T F160L",5
"lib1","SARS-CoV-2","CAAAGATCTTTCCAGA",5,22.38,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","T46P T63W",2
"lib1","SARS-CoV-2","CAAAGATGATACCTTT",1,1.72,NA,NA,NA,NA,NA,NA,"stop","A105* S113A",2
"lib1","SARS-CoV-2","CAAAGATGTAAAATCC",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19I P96T D97N",3
"lib1","SARS-CoV-2","CAAAGATGTACCCTTA",1,10.79,10.88,0.11,0.11,2.86,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAGATGTATTGGAA",4,27.03,6.8,-3.96,0.37,1.76,1.15,0.03,">1 nonsynonymous","S36Y N92H G152T",3
"lib1","SARS-CoV-2","CAAAGATTCTGCGCTG",1,9.97,10.36,-0.4,0.09,2.9,1.09,0,">1 nonsynonymous","V37D P54C",2
"lib1","SARS-CoV-2","CAAAGATTTGGTATGT",16,199.53,8.77,-2,0.09,2.29,1.11,0,">1 nonsynonymous","C61F N130S G146Q",3
"lib1","SARS-CoV-2","CAAAGATTTTAAATTG",2,13.64,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","C6R T63S I88Y I142S F185I",5
"lib1","SARS-CoV-2","CAAAGCAAAACTCCAA",2,25.83,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Q84N N109R N171R",3
"lib1","SARS-CoV-2","CAAAGCAAACAAGGTT",1,15.32,6,-4.76,0.47,3,1.02,0,">1 nonsynonymous","E10M A89Y A105V H189F",4
"lib1","SARS-CoV-2","CAAAGCAAACCAGGTC",5,52.87,10.12,-0.64,0.07,2.74,1.04,0,">1 nonsynonymous","F44S R78K Y91F I138S",4
"lib1","SARS-CoV-2","CAAAGCAAAGGAATTG",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R I80R D97I C150A T170R G174V",6
"lib1","SARS-CoV-2","CAAAGCAAATCAATAC",11,36.84,9.51,-1.25,0.27,1.5,1.04,0.03,">1 nonsynonymous","T55W A105L",2
"lib1","SARS-CoV-2","CAAAGCAAATCTTCCC",1,6.31,10.21,-0.56,0.07,3,1,0,">1 nonsynonymous","L60P S129V",2
"lib1","SARS-CoV-2","CAAAGCAAGGCAAACA",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150M F156S",2
"lib1","SARS-CoV-2","CAAAGCAAGGGTCGGT",3,11.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14M N107A P149F",3
"lib1","SARS-CoV-2","CAAAGCACCCACAAGT",3,67.06,9.21,-1.55,0.18,1.84,1.15,0.01,">1 nonsynonymous","K56V A105T G152V",3
"lib1","SARS-CoV-2","CAAAGCACCCAGTCGT",2,49.61,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A89V N107A Y159L",3
"lib1","SARS-CoV-2","CAAAGCACGCAATTGG",4,51.96,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20E V37Y F134C P197A",4
"lib1","SARS-CoV-2","CAAAGCACGCCCCACC",1,7.95,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C61F N107I Q144S G152P Y175K",5
"lib1","SARS-CoV-2","CAAAGCATAAATACAT",2,6.63,8.73,-2.03,0.22,1.85,1.01,0.01,">1 nonsynonymous","S19K A33S",2
"lib1","SARS-CoV-2","CAAAGCATATAGAGTA",2,51.04,10.62,-0.15,0.07,2.94,1.01,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","CAAAGCATGTAATGCG",1,37.12,8.39,-2.38,0.21,2.15,1.19,0.02,">1 nonsynonymous","N58Q Y121P K128P F156V",4
"lib1","SARS-CoV-2","CAAAGCCATAGGCACC",3,64.78,10.58,-0.18,0.03,2.96,1.01,0,">1 nonsynonymous","R16W R27V K94R",3
"lib1","SARS-CoV-2","CAAAGCCCACGACAAA",5,11.14,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","L5V Q84S F99T G116W T140G",5
"lib1","SARS-CoV-2","CAAAGCCCCGACTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F N58L R136N",3
"lib1","SARS-CoV-2","CAAAGCCGGATCAATA",2,15.08,10.77,0.01,0.09,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAGCCTAACCATTG",1,31.14,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","S129L G166Y V181E",3
"lib1","SARS-CoV-2","CAAAGCCTGACATGAG",4,44.23,10.77,0,0.1,2.84,1.1,0,">1 nonsynonymous","R27E A33H Q163V L188R",4
"lib1","SARS-CoV-2","CAAAGCCTGTTACGTA",4,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T A33V K128M P177C",4
"lib1","SARS-CoV-2","CAAAGCCTTGATTTTT",3,48.45,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G86F R124N Q168K",3
"lib1","SARS-CoV-2","CAAAGCGCGACCTTCC",1,45.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","CAAAGCGCTTGTAAAA",9,57.65,10.67,-0.09,0.05,2.92,1.07,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","CAAAGCGGACTAAGAA",2,84.81,9.34,-1.43,0.1,2.09,1.07,0,">1 nonsynonymous","G51F F156L",2
"lib1","SARS-CoV-2","CAAAGCGGGACAATTT",12,51.25,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G51T G146L",2
"lib1","SARS-CoV-2","CAAAGCGTACACATAA",6,84.12,10.23,-0.53,0.07,2.7,1.09,0,">1 nonsynonymous","N40H K48R D90L D98S",4
"lib1","SARS-CoV-2","CAAAGCGTGTGCACTT",4,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V Q144I F156C",3
"lib1","SARS-CoV-2","CAAAGCGTGTTCTACG",4,1171.13,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y93Q K199M",2
"lib1","SARS-CoV-2","CAAAGCGTTTCCTTAA",1,9.04,9.32,-1.45,0.25,1.95,1.07,0.03,">1 nonsynonymous","T100G I138P",2
"lib1","SARS-CoV-2","CAAAGCTAATTGATTA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","V37S P149L G172*",3
"lib1","SARS-CoV-2","CAAAGCTACAAAAAGT",3,16.15,8.07,-2.69,0.38,1.5,1,0.04,">1 nonsynonymous","V11S S19M",2
"lib1","SARS-CoV-2","CAAAGCTAGAAATCAA",2,32.12,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y175V F185C",2
"lib1","SARS-CoV-2","CAAAGCTAGTTGACAA",9,209.02,10.76,-0.01,0.07,2.89,1.07,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","CAAAGCTATACAAGTT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35G D90L E135K",3
"lib1","SARS-CoV-2","CAAAGCTATAGTACGT",2,28.6,10.08,-0.68,0.09,2.05,1.02,0,">1 nonsynonymous","N64K A105C T201H",3
"lib1","SARS-CoV-2","CAAAGCTATCCTCGAG",4,28.66,9.76,-1,0.34,1.69,1.05,0.06,">1 nonsynonymous","Y66V L95D G155D",3
"lib1","SARS-CoV-2","CAAAGCTCAGCCGTAC",3,20.68,6,-4.76,1.58,3,1.12,0,">1 nonsynonymous","D34Y Y143N G152A",3
"lib1","SARS-CoV-2","CAAAGCTCCACTAAAG",5,7.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I N107H Y121D T140L",4
"lib1","SARS-CoV-2","CAAAGCTCTATTAGAG",1,5.94,10.64,-0.12,0.12,2.83,1.14,0,"1 nonsynonymous","N120D",1
"lib1","SARS-CoV-2","CAAAGCTCTTTAAAGC",8,80.89,10.12,-0.65,0.08,2.68,1.01,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","CAAAGCTGAAAACAAT",1,32.55,6.53,-4.24,0.63,1.5,1.19,0.04,">1 nonsynonymous","Y50D C61P G116R T201M",4
"lib1","SARS-CoV-2","CAAAGCTGGGACTCTT",5,30.5,10.27,-0.49,0.06,2.94,1,0,">1 nonsynonymous","S41P F47I C61R",3
"lib1","SARS-CoV-2","CAAAGCTTCGCTCAGT",2,11.89,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L95Y P149A F160S",3
"lib1","SARS-CoV-2","CAAAGGAAAACACAGT",10,107.21,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16S I88W V115L K199L",4
"lib1","SARS-CoV-2","CAAAGGAAGAGACACA",3,30.05,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S69W F99R R127S",3
"lib1","SARS-CoV-2","CAAAGGAATTAAAGTT",3,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S L60C Y91I D97F S129K S139R",6
"lib1","SARS-CoV-2","CAAAGGACTGAACATA",3,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R G117V D137K",3
"lib1","SARS-CoV-2","CAAAGGAGACTTCTCT",4,41.37,8.87,-1.9,0.32,1.5,1.12,0.04,">1 nonsynonymous","F185K H189L",2
"lib1","SARS-CoV-2","CAAAGGATACGCGCTG",1,55.39,10.69,-0.07,0.07,2.94,1.04,0.01,"1 nonsynonymous","C61H",1
"lib1","SARS-CoV-2","CAAAGGATCAGGCGTG",5,72.1,10.54,-0.22,0.09,2.86,1.05,0,">1 nonsynonymous","K48Y H189N",2
"lib1","SARS-CoV-2","CAAAGGATGATATATG",1,9.84,10.51,-0.25,0.12,2.8,1.24,0.01,"1 nonsynonymous","E141A",1
"lib1","SARS-CoV-2","CAAAGGCAAAACAATA",9,158.78,10.58,-0.18,0.05,2.89,1.01,0,">1 nonsynonymous","N1F Q163I",2
"lib1","SARS-CoV-2","CAAAGGCATTTCGCAA",1,43.63,6.59,-4.17,0.4,1.5,1.25,0.02,">1 nonsynonymous","S129G T140P Y165L",3
"lib1","SARS-CoV-2","CAAAGGCGGCTGTGAA",4,3.26,NA,NA,NA,NA,NA,NA,"stop","R27* F156I",2
"lib1","SARS-CoV-2","CAAAGGCGTCGACATC",3,5.43,6.28,-4.49,1.43,1.5,1.07,0.02,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","CAAAGGCTACAAATTC",3,50.87,10.46,-0.3,0.07,2.78,1.06,0,">1 nonsynonymous","G116I G152D",2
"lib1","SARS-CoV-2","CAAAGGCTCAAAATAT",3,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F G116I",2
"lib1","SARS-CoV-2","CAAAGGGAAAAAAAAG",2,40.62,10.01,-0.75,0.1,2.63,1.01,0,">1 nonsynonymous","P54Q Y178I",2
"lib1","SARS-CoV-2","CAAAGGGAACAGGCAC",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V L122R S147V G166V",4
"lib1","SARS-CoV-2","CAAAGGGCAACTTAGC",6,34.63,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A14L C49R V103L K128G S139R",5
"lib1","SARS-CoV-2","CAAAGGGGTTAAAGTA",4,18.58,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C49I G101L E135N",3
"lib1","SARS-CoV-2","CAAAGGGGTTAATGCA",6,60.26,10.77,0,0.06,2.86,1.05,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CAAAGGGGTTGCATCG",6,80.88,10.57,-0.19,0.05,2.89,1.05,0,">1 nonsynonymous","N4H A42M S147L V173M",4
"lib1","SARS-CoV-2","CAAAGGTAGTTGACAT",1,14.28,10.19,-0.57,0.12,3,1.03,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","CAAAGGTGGGCTAAAT",1,1.36,NA,NA,NA,NA,NA,NA,"stop","L60* L183G",2
"lib1","SARS-CoV-2","CAAAGGTTTAATAAGG",10,94.3,9.35,-1.42,0.11,2.41,1.17,0.01,">1 nonsynonymous","I2H R73M E141W L187I",4
"lib1","SARS-CoV-2","CAAAGTAAAAATACTA",5,57.94,6.68,-4.08,0.22,1.5,1.1,0.01,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","CAAAGTAAAATCCCTT",3,3.18,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","CAAAGTAAAGCTGCCT",1,14.55,8.33,-2.44,0.47,1.5,1.18,0.07,"1 nonsynonymous","D137W",1
"lib1","SARS-CoV-2","CAAAGTAAAGGTCCCA",1,13.29,10.64,-0.12,0.1,2.85,1.12,0.01,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","CAAAGTAACACGACAG",1,51.4,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N4H Y21W C31E F156S P177E",5
"lib1","SARS-CoV-2","CAAAGTAACTATATGA",2,21.6,9.76,-1,0.05,2.87,1.03,0,">1 nonsynonymous","I138S G174F",2
"lib1","SARS-CoV-2","CAAAGTAACTGGATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","N1* F12L",2
"lib1","SARS-CoV-2","CAAAGTAAGCTCAGCT",5,1.42,NA,NA,NA,NA,NA,NA,"stop","G146Y Y165*",2
"lib1","SARS-CoV-2","CAAAGTAATGACTTAC",3,41.88,9.69,-1.07,0.13,1.93,1,0.01,">1 nonsynonymous","S41M D59L N64V D90F H189R",5
"lib1","SARS-CoV-2","CAAAGTACACCCAAAC",1,21.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T55S P169T",2
"lib1","SARS-CoV-2","CAAAGTACCGTGTGAA",9,182.19,10.32,-0.45,0.03,2.85,1.02,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","CAAAGTACGCAAACAC",1,13,8.13,-2.64,0.51,1.5,1,0.05,">1 nonsynonymous","C49I N120F K128R",3
"lib1","SARS-CoV-2","CAAAGTACGTAAAGCT",6,98.67,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y143D G172M T201F",3
"lib1","SARS-CoV-2","CAAAGTACTTCTAAGT",1,19.06,10.05,-0.71,0.08,2.93,1.03,0,">1 nonsynonymous","A14K Y39L K87N I138S L188R",5
"lib1","SARS-CoV-2","CAAAGTATAACATGCC",6,114.75,8.31,-2.45,0.23,1.5,1.12,0.02,">1 nonsynonymous","Y35H N64L P96N I138T",4
"lib1","SARS-CoV-2","CAAAGTATAATGAAAG",2,33.53,10.53,-0.23,0.06,2.93,1.05,0,">1 nonsynonymous","I2E F44L",2
"lib1","SARS-CoV-2","CAAAGTCAAAGTCTCC",4,18.16,10.69,-0.08,0.12,2.87,1,0.01,">1 nonsynonymous","A18W P197K",2
"lib1","SARS-CoV-2","CAAAGTCATACCTCAG",3,100.12,10.51,-0.25,0.04,2.9,1.03,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","CAAAGTCCAATACTGC",4,10.85,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P82Y E186T T201L",3
"lib1","SARS-CoV-2","CAAAGTCCATGCTCTC",8,79.12,9.57,-1.19,0.07,2.81,1.07,0,">1 nonsynonymous","I2L G146R",2
"lib1","SARS-CoV-2","CAAAGTCCGCCTGTGA",2,10.21,9.61,-1.15,0.45,1.5,1,0.06,">1 nonsynonymous","C6T N13A F62D Q144H",4
"lib1","SARS-CoV-2","CAAAGTCCTCGCATCA",11,102.31,10.77,0,0.07,2.89,1.07,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","CAAAGTCGGACCTATT",1,47.27,10.24,-0.52,0.06,2.81,1,0,">1 nonsynonymous","N4M P54R F134E",3
"lib1","SARS-CoV-2","CAAAGTCTTATAGAAG",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146R V173P",2
"lib1","SARS-CoV-2","CAAAGTGAAGAGTGTT",5,66.67,9.75,-1.02,0.09,2.53,1.06,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","CAAAGTGAAGGAAGGA",2,20.23,9.99,-0.77,0.12,2.49,1.02,0.01,">1 nonsynonymous","S36N P96Q",2
"lib1","SARS-CoV-2","CAAAGTGAATAGATAC",6,73.16,6,-4.76,1.71,1.5,1.19,0.01,">1 nonsynonymous","F44D D90T F99L I142S V173N",5
"lib1","SARS-CoV-2","CAAAGTGACACCAAGC",4,40.1,8.93,-1.83,0.31,1.5,1,0.05,">1 nonsynonymous","T46H V180S",2
"lib1","SARS-CoV-2","CAAAGTGACTAAATCA",6,174.87,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6L A14F R25G Y35P S43P T201P",6
"lib1","SARS-CoV-2","CAAAGTGATTGTCATA",2,39.59,8.48,-2.29,0.24,1.5,1.12,0.02,">1 nonsynonymous","P7I L122I A145I P149H",4
"lib1","SARS-CoV-2","CAAAGTGCCCCAACAA",6,35.03,6,-4.76,2,3,1.27,0,">1 nonsynonymous","L60S E141S V182D",3
"lib1","SARS-CoV-2","CAAAGTGGATAACGTG",8,243.98,10.75,-0.01,0.04,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAAGTGGATGTTCTA",6,5.68,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","E10R V20A P54E V65R V173A",5
"lib1","SARS-CoV-2","CAAAGTGGCCTGAAAT",2,82.66,10.7,-0.06,0.06,2.94,1.04,0,">1 nonsynonymous","K56L D97N",2
"lib1","SARS-CoV-2","CAAAGTGGTCAGTGTC",3,9.25,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","CAAAGTGGTTTACCAT",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L C49K C61T G83N Y123T S164C V173P",7
"lib1","SARS-CoV-2","CAAAGTGTCGACACAG",1,78.16,10.15,-0.61,0.05,2.76,1,0,">1 nonsynonymous","N13D K114L",2
"lib1","SARS-CoV-2","CAAAGTGTTCCATTTT",1,49.52,6.25,-4.51,0.68,1.5,1.12,0.02,">1 nonsynonymous","K114R G146R Y175C",3
"lib1","SARS-CoV-2","CAAAGTTACAACAGGG",1,0.25,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAAGTTCGATCATCC",4,18.63,6,-4.76,2,3,1.09,0,">1 nonsynonymous","D97Y R124C",2
"lib1","SARS-CoV-2","CAAAGTTCGCTGAGAG",3,26.35,10.38,-0.38,0.11,2.77,1.09,0.01,">1 nonsynonymous","E10G G83R",2
"lib1","SARS-CoV-2","CAAAGTTTACGGTGTC",2,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G K56A N157P",3
"lib1","SARS-CoV-2","CAAAGTTTAGTTCGCC",5,2.84,NA,NA,NA,NA,NA,NA,"stop","E10* K128I",2
"lib1","SARS-CoV-2","CAAAGTTTATGAAAAC",10,70.86,8.67,-2.1,0.18,1.5,1.04,0.01,">1 nonsynonymous","W23R N120R",2
"lib1","SARS-CoV-2","CAAAGTTTCCACACTT",1,92.18,10.81,0.04,0.06,2.95,1.04,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","CAAAGTTTCTAATATC",9,960.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59N Y119T S139P",3
"lib1","SARS-CoV-2","CAAAGTTTGCGAAGAA",9,80.3,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","S29G T100P G117R",3
"lib1","SARS-CoV-2","CAAATAAAAAGAGAGC",2,19.42,8.06,-2.7,0.28,1.5,1.09,0.03,">1 nonsynonymous","N4L C49T T55D C61V",4
"lib1","SARS-CoV-2","CAAATAAAAAGCCCTA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","N58T V77* T85P V103L S139I T201I",6
"lib1","SARS-CoV-2","CAAATAAAACAAAGAT",5,73.08,9.91,-0.85,0.11,2.23,1.03,0,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","CAAATAAAACTGAAAC",4,23.75,10.56,-0.2,0.07,2.87,1.05,0,">1 nonsynonymous","F62T D97R K132M",3
"lib1","SARS-CoV-2","CAAATAAAAGTTAAGA",3,241.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5S D34G D90R D112F Q168F",5
"lib1","SARS-CoV-2","CAAATAAAATCCTGCA",6,48.23,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I2P F8I G83H N92T",4
"lib1","SARS-CoV-2","CAAATAAACCATCTAT",3,0.84,NA,NA,NA,NA,NA,NA,"stop","S45Y G83L N92*",3
"lib1","SARS-CoV-2","CAAATAAACCTTTGCC",2,32.93,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C61T N92I A105E",3
"lib1","SARS-CoV-2","CAAATAAACGTCGAAA",6,58.21,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","T46P T100G N110I F160S",4
"lib1","SARS-CoV-2","CAAATAAACTCACAAG",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V S36L",2
"lib1","SARS-CoV-2","CAAATAAAGAACAATA",3,2.38,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","CAAATAAAGATTATTT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","C49R Y91* L122V G146N",4
"lib1","SARS-CoV-2","CAAATAAAGTGCACCA",1,66.81,10.07,-0.7,0.08,2.63,1.03,0,">1 nonsynonymous","F44S F134N",2
"lib1","SARS-CoV-2","CAAATAAATCAAAAAG",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F N30T F44W K56H D90F",5
"lib1","SARS-CoV-2","CAAATAACAAAAGGAT",2,20.2,10.67,-0.09,0.09,2.92,1.02,0.01,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","CAAATAACAACGAAAT",3,30.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3G C61Y I88A",3
"lib1","SARS-CoV-2","CAAATAACACAAAATA",2,36.02,10.64,-0.12,0.07,2.82,1.13,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","CAAATAACAGAAAACG",4,124.26,10.45,-0.32,0.05,2.88,1.02,0,">1 nonsynonymous","R27S D59S I138R",3
"lib1","SARS-CoV-2","CAAATAACCGACAGAG",2,17.64,10.03,-0.74,0.09,2.93,1.05,0,">1 nonsynonymous","D98S G116Y K198F",3
"lib1","SARS-CoV-2","CAAATAACTACAATTT",1,22.89,10.41,-0.36,0.3,2.73,1,0.02,">1 nonsynonymous","C6S T63K",2
"lib1","SARS-CoV-2","CAAATAACTCAAAATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D R27M Y50L",3
"lib1","SARS-CoV-2","CAAATAACTCCAAATG",1,50.43,10.69,-0.08,0.08,2.88,1.1,0,">1 nonsynonymous","I28F S43F",2
"lib1","SARS-CoV-2","CAAATAACTGGAGGCC",1,40.47,10.7,-0.06,0.06,2.95,1,0,">1 nonsynonymous","L5Y G152D",2
"lib1","SARS-CoV-2","CAAATAACTTTGGACG",6,15.98,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","T15Y I88S Y121F Y143S N151T",5
"lib1","SARS-CoV-2","CAAATAAGATTAATAA",11,21.17,9.04,-1.73,0.19,1.9,1.12,0.02,">1 nonsynonymous","N13D Y35W A42Y K56P F70M V173I",6
"lib1","SARS-CoV-2","CAAATAAGTGTCACTT",1,23.47,10.72,-0.04,0.06,2.95,1.01,0,">1 nonsynonymous","V11I G83A",2
"lib1","SARS-CoV-2","CAAATAATAAGCACTA",9,180.9,10.79,0.03,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATAATACCAAACA",4,16.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58V P96K P161R",3
"lib1","SARS-CoV-2","CAAATAATAGAAGACT",1,17.53,8.38,-2.39,0.13,2.97,1.04,0.01,">1 nonsynonymous","C31M K87V Y119D",3
"lib1","SARS-CoV-2","CAAATAATATCGCTTA",1,8.42,10.59,-0.17,0.04,2.94,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATAATCAAATTAG",3,71.76,10.76,0,0.07,2.95,1.04,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","CAAATAATCTGTACCA",2,18.87,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I72N V153T F167K",3
"lib1","SARS-CoV-2","CAAATAATTAAAGTTA",4,85.02,10.85,0.09,0.07,2.94,1.01,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","CAAATACAAATCCCTA",2,8.3,10.85,0.08,0.11,2.93,1.02,0.01,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","CAAATACAAATTCAGG",5,57.72,10.75,-0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATACAACTTCTTG",11,3.08,NA,NA,NA,NA,NA,NA,"stop","N13C S29* Y35T D98G",4
"lib1","SARS-CoV-2","CAAATACAAGAACTGA",4,2.27,NA,NA,NA,NA,NA,NA,"stop","S69L G83K D97*",3
"lib1","SARS-CoV-2","CAAATACAAGCCCTTA",1,7.87,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9H A18I G86T A105M P149H",5
"lib1","SARS-CoV-2","CAAATACAATCACGGG",3,68.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S S164Y",2
"lib1","SARS-CoV-2","CAAATACAATTAATCC",3,12.27,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S45P G86P D97R N157D",4
"lib1","SARS-CoV-2","CAAATACCAAAATAAA",8,100.23,10.72,-0.04,0.06,2.88,1.07,0,"1 nonsynonymous","Q144N",1
"lib1","SARS-CoV-2","CAAATACCCGAGGCAA",6,32.71,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","A14W V71A Y91V Y119Q",4
"lib1","SARS-CoV-2","CAAATACCTAGAAGAT",2,31.37,10.66,-0.11,0.14,2.7,1.25,0.01,"1 nonsynonymous","Y39V",1
"lib1","SARS-CoV-2","CAAATACCTTAAATCG",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26S S43K W106L",3
"lib1","SARS-CoV-2","CAAATACGAATGCGAC",1,18.8,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N58F W106K Y143R C150I E154T",5
"lib1","SARS-CoV-2","CAAATACGAGAAAATG",2,63.12,10.75,-0.02,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATACGCTGTGATC",4,19.3,10.63,-0.13,0.08,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAATACGGACTCACG",3,75.82,10.69,-0.08,0.05,2.93,1.03,0,">1 nonsynonymous","N40K S129H",2
"lib1","SARS-CoV-2","CAAATACTGAAACGCG",8,31.44,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","D59G A67P Q144F P149R C158Y R179K",6
"lib1","SARS-CoV-2","CAAATAGAATGTGACA",1,10.05,10.29,-0.47,0.15,2.69,1.06,0.01,">1 nonsynonymous","S19N P149G",2
"lib1","SARS-CoV-2","CAAATAGACCCGCCTA",3,27.03,10.22,-0.54,0.11,2.67,1.06,0,">1 nonsynonymous","N1W F12L",2
"lib1","SARS-CoV-2","CAAATAGACTTTTTGG",7,68.03,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R16W F126S P161C",3
"lib1","SARS-CoV-2","CAAATAGATGAAAATG",11,80.58,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","CAAATAGCGAGCAAGA",7,169.91,10.53,-0.23,0.04,2.9,1.03,0,">1 nonsynonymous","N4L P197G",2
"lib1","SARS-CoV-2","CAAATAGCTCACACAA",1,26.22,9.28,-1.48,0.11,2.88,1.12,0.01,">1 nonsynonymous","L122T T170L",2
"lib1","SARS-CoV-2","CAAATAGTAAGGCCGT",2,13.69,10.3,-0.47,0.19,1.82,1.07,0.01,">1 nonsynonymous","T15F S29F K128Q",3
"lib1","SARS-CoV-2","CAAATATAACGACGAA",1,2.07,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAATATAAGCGTATT",3,0,NA,NA,NA,NA,NA,NA,"stop","S43L T55L G117V Y123* S147L",5
"lib1","SARS-CoV-2","CAAATATACCGAATGT",3,47.52,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V11I K26A A89Y D97V N107A N130T I138M",7
"lib1","SARS-CoV-2","CAAATATACCGTATTT",10,166.8,10.32,-0.44,0.05,2.9,1.06,0,">1 nonsynonymous","K87L G146S",2
"lib1","SARS-CoV-2","CAAATATACGCGACCG",8,4.4,NA,NA,NA,NA,NA,NA,"stop","G9R A33Q P96*",3
"lib1","SARS-CoV-2","CAAATATACTCCACTG",7,67.09,9.68,-1.08,0.09,2.09,1.06,0,">1 nonsynonymous","S41M S45F D59L T201C",4
"lib1","SARS-CoV-2","CAAATATAGACATGGA",2,49.69,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36L N92F K128D G152K A190F",5
"lib1","SARS-CoV-2","CAAATATATAATTTAT",4,84.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36L F99K",2
"lib1","SARS-CoV-2","CAAATATCGAAGCATA",5,23.64,10.15,-0.61,0.11,2.67,1.09,0.01,">1 nonsynonymous","N58S Y66C",2
"lib1","SARS-CoV-2","CAAATATCTATTCTTA",2,932.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D98Q A105S Y159T",3
"lib1","SARS-CoV-2","CAAATATCTTAGCACG",4,29.49,6,-4.76,2,3,1.2,0,">1 nonsynonymous","Q84R P96L W106G T148P",4
"lib1","SARS-CoV-2","CAAATATGAACACAAC",1,14.24,9.94,-0.82,0.19,2.59,1.14,0.02,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","CAAATATGATACAATT",4,34.06,10.85,0.09,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATATGGAAGAAGG",2,63.35,9.62,-1.14,0.14,1.91,1.08,0.01,">1 nonsynonymous","L5R F99Y G152C",3
"lib1","SARS-CoV-2","CAAATATGGCTAGTTT",6,96.7,10.63,-0.13,0.03,2.93,1.03,0,">1 nonsynonymous","D59E I138R",2
"lib1","SARS-CoV-2","CAAATATTCATATAGT",16,139.69,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","L5K V52A W106T F167V",4
"lib1","SARS-CoV-2","CAAATATTCCATTGTC",4,0.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","CAAATATTTACCCAGC",1,50.5,10.79,0.02,0.05,2.94,1.04,0,"1 nonsynonymous","P191S",1
"lib1","SARS-CoV-2","CAAATATTTATGATAT",11,82.61,10.77,0,0.08,2.88,1.07,0,"1 nonsynonymous","N130M",1
"lib1","SARS-CoV-2","CAAATCAAAAGAAGTG",2,2.58,NA,NA,NA,NA,NA,NA,"stop","F47Y K87* T201*",3
"lib1","SARS-CoV-2","CAAATCAAAAGTTCCC",7,20.51,NA,NA,NA,NA,NA,NA,"stop","C61S R127*",2
"lib1","SARS-CoV-2","CAAATCAACCATTATC",18,137.02,8.79,-1.98,0.2,1.5,1.15,0.02,">1 nonsynonymous","T3W F12T C61T K132M",4
"lib1","SARS-CoV-2","CAAATCACACCCCAGG",3,7.47,6.15,-4.62,2,3,1.02,0,">1 nonsynonymous","V115S C150A",2
"lib1","SARS-CoV-2","CAAATCACCAGGGGGT",1,22.39,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V77E Q144Y",2
"lib1","SARS-CoV-2","CAAATCACCCCTACGG",6,10.81,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","L60E K94D",2
"lib1","SARS-CoV-2","CAAATCAGACCCTTTT",2,27.54,6,-4.76,1.73,1.5,1.12,0.01,">1 nonsynonymous","T55G P82Q Y91T T140I F156K",5
"lib1","SARS-CoV-2","CAAATCATAATAAATT",1,16.1,7.24,-3.52,0.35,1.5,1.04,0.03,">1 nonsynonymous","C102D G116A A145R",3
"lib1","SARS-CoV-2","CAAATCATATCTTCGG",3,83.43,8.73,-2.03,0.08,2.87,1.04,0,">1 nonsynonymous","F160R Q168K",2
"lib1","SARS-CoV-2","CAAATCATCATGGTAT",2,30.84,10.52,-0.25,0.07,2.79,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATCATCATTCAAC",3,56.35,6,-4.76,1.02,3,1.1,0,">1 nonsynonymous","A18E N118H A145D P177A",4
"lib1","SARS-CoV-2","CAAATCATGTTGGAAT",4,6.07,6,-4.76,2,3,1.02,0,">1 nonsynonymous","F12Y S19A S43M D112A P133W",5
"lib1","SARS-CoV-2","CAAATCCAATTATGTA",1,8.51,10.27,-0.5,0.26,2.81,1,0.01,">1 nonsynonymous","D97G Y119T",2
"lib1","SARS-CoV-2","CAAATCCAGCAATATC",3,9.38,6,-4.76,2,1.5,1.2,0.05,"1 nonsynonymous","V182N",1
"lib1","SARS-CoV-2","CAAATCCATTACCCAC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","I2C P82Y Y143*",3
"lib1","SARS-CoV-2","CAAATCCATTCTCGTT",7,27.34,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","A89D T170F",2
"lib1","SARS-CoV-2","CAAATCCCAAAAACTT",3,47.88,8.74,-2.02,0.07,2.86,1.03,0,">1 nonsynonymous","F126L F156Q G174R",3
"lib1","SARS-CoV-2","CAAATCCCCTGTCGTT",1,26.09,9.86,-0.9,0.09,1.98,1.05,0,">1 nonsynonymous","F12W N40A",2
"lib1","SARS-CoV-2","CAAATCCCCTTTAAAA",3,22.4,10.16,-0.61,0.12,2.46,1.05,0.01,">1 nonsynonymous","A42N L95C",2
"lib1","SARS-CoV-2","CAAATCCCTAGAAAGG",2,64.81,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A22K L38T T55A N157M",4
"lib1","SARS-CoV-2","CAAATCCCTATTACCC",5,59.01,6,-4.76,2,3,1.17,0,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","CAAATCCCTTGAAATT",10,1.55,NA,NA,NA,NA,NA,NA,"stop","V32Q N107C L122*",3
"lib1","SARS-CoV-2","CAAATCCCTTGCTTCT",4,19.43,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C158Y T201K",2
"lib1","SARS-CoV-2","CAAATCCGACATAGAA",9,50.2,7.62,-3.14,0.13,1.5,1.16,0.01,">1 nonsynonymous","G117L S139L",2
"lib1","SARS-CoV-2","CAAATCCGTTCCCTTT",1,10.62,6.47,-4.3,0.58,1.5,1.15,0.01,">1 nonsynonymous","S36W S41A K87I K94P",4
"lib1","SARS-CoV-2","CAAATCCTACAGTAAA",1,9.02,10.03,-0.73,0.1,2.88,1.08,0,">1 nonsynonymous","C6D V37A N64Q",3
"lib1","SARS-CoV-2","CAAATCCTCAACCACA",7,2.32,NA,NA,NA,NA,NA,NA,"stop","R16N R27* S45A Y119S Y143C",5
"lib1","SARS-CoV-2","CAAATCCTCGATAGGT",1,28.32,10.75,-0.01,0.07,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAATCCTTTAAACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* S45Y I80K",3
"lib1","SARS-CoV-2","CAAATCGAATTCTATA",3,2.72,NA,NA,NA,NA,NA,NA,"stop","S53* L60S G74L D112S R127F V173D",6
"lib1","SARS-CoV-2","CAAATCGACAGCCTTA",5,103.06,9.58,-1.18,0.05,2.87,1.05,0,">1 nonsynonymous","F8L Y119H",2
"lib1","SARS-CoV-2","CAAATCGAGTACTACT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","T85F N120*",2
"lib1","SARS-CoV-2","CAAATCGATTCGTTCA",7,77.27,10.72,-0.04,0.04,2.94,1.03,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","CAAATCGCTAATTGTT",1,78.64,9.89,-0.88,0.08,2.74,1.04,0,"1 nonsynonymous","V173P",1
"lib1","SARS-CoV-2","CAAATCGGCATTATAC",7,5.05,NA,NA,NA,NA,NA,NA,"stop","D68G L162W Y178*",3
"lib1","SARS-CoV-2","CAAATCGGGAAAAGGC",1,46.21,8.15,-2.61,0.22,1.68,1.11,0.02,">1 nonsynonymous","T63Y N118D G152I",3
"lib1","SARS-CoV-2","CAAATCGGGTAAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* K56P C158F L187Y",4
"lib1","SARS-CoV-2","CAAATCGTGAATAGAC",9,97.36,10.79,0.03,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATCTAAGCTGAAT",3,36.7,9.95,-0.81,0.17,2.26,1.1,0.01,">1 nonsynonymous","L5F K56L R136T",3
"lib1","SARS-CoV-2","CAAATCTAGACCATCT",4,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V F99Q Y121I P161S",4
"lib1","SARS-CoV-2","CAAATCTAGTGCGTTA",7,76.12,10.56,-0.2,0.03,2.93,1.03,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","CAAATCTATGTGCGCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N24D",1
"lib1","SARS-CoV-2","CAAATCTATTAATCCT",3,16.08,10.93,0.17,0.09,2.87,1.1,0,">1 nonsynonymous","R16F Y35L",2
"lib1","SARS-CoV-2","CAAATCTCATAGATGA",2,28.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6G L60P L95A S184T",4
"lib1","SARS-CoV-2","CAAATCTCGATAGTAG",7,107.96,10.61,-0.15,0.04,2.88,1.05,0,"1 nonsynonymous","S184K",1
"lib1","SARS-CoV-2","CAAATCTCGCATTAGC",9,40.67,6.43,-4.33,0.49,1.5,1.13,0.02,">1 nonsynonymous","R25N D98L N120Y",3
"lib1","SARS-CoV-2","CAAATCTCGTTATCCT",3,99.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V65W S69G P96L R124T",4
"lib1","SARS-CoV-2","CAAATCTGTTACGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib1","SARS-CoV-2","CAAATCTTACAAATCA",2,8.14,9.76,-1.01,0.2,2.18,1,0.02,">1 nonsynonymous","I2W N107V",2
"lib1","SARS-CoV-2","CAAATCTTATAGCCTG",2,38.24,8.91,-1.86,0.14,2.64,1.05,0.01,">1 nonsynonymous","T3F S41L G83N L125V F160M",5
"lib1","SARS-CoV-2","CAAATCTTCATCTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113G L125P",2
"lib1","SARS-CoV-2","CAAATCTTTGTAACCG",6,100.38,10.76,0,0.07,2.94,1.03,0,">1 nonsynonymous","T55Y K198N",2
"lib1","SARS-CoV-2","CAAATGAAAAAGCTAG",2,18.74,7.6,-3.17,0.42,1.83,1.13,0.04,">1 nonsynonymous","A42T C49L L122R G152V",4
"lib1","SARS-CoV-2","CAAATGAAAATTTTAG",6,58.99,10.63,-0.13,0.04,2.93,1,0,">1 nonsynonymous","A42L R73Q Y123K",3
"lib1","SARS-CoV-2","CAAATGAAAGCAGAGG",1,20.69,6.06,-4.7,0.81,1.5,1.14,0.02,"1 nonsynonymous","R124Y",1
"lib1","SARS-CoV-2","CAAATGAACCGGACTG",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y V37L F62L Q84N",4
"lib1","SARS-CoV-2","CAAATGACACCGGGCA",1,28.13,10.71,-0.05,0.08,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATGACAGCTTAGA",5,36.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11I Y39G A105S Q144T L162S",5
"lib1","SARS-CoV-2","CAAATGACAGGTCTGC",1,16.05,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","W23A K114S Y121V P169S",4
"lib1","SARS-CoV-2","CAAATGACTAAATGTC",3,21.92,9.27,-1.5,0.07,2.92,1,0,">1 nonsynonymous","R27E Y119D",2
"lib1","SARS-CoV-2","CAAATGACTCATATAA",2,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G K87R Y93T C102D R136L",5
"lib1","SARS-CoV-2","CAAATGAGACTCTCCT",2,13.37,8.5,-2.27,0.23,2,1.04,0.02,">1 nonsynonymous","T63R N107L",2
"lib1","SARS-CoV-2","CAAATGAGCACAACAG",16,288.15,10.67,-0.1,0.06,2.88,1.05,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","CAAATGATCATACTCC",4,22.1,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I80F G146L C158G T170R G172R",5
"lib1","SARS-CoV-2","CAAATGATGGATAATC",5,0.91,NA,NA,NA,NA,NA,NA,"stop","C31* C150R T201G",3
"lib1","SARS-CoV-2","CAAATGCAATAAACAA",1,27.89,8.06,-2.7,0.22,1.8,1.07,0.02,">1 nonsynonymous","A14H N157T",2
"lib1","SARS-CoV-2","CAAATGCCACGCTATC",6,105.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L60A S129T P149S F167A",4
"lib1","SARS-CoV-2","CAAATGCCCGGATGTG",5,73.09,9.75,-1.02,0.05,2.78,1.04,0,">1 nonsynonymous","I2R K56M G74A",3
"lib1","SARS-CoV-2","CAAATGCCCTTGACAC",9,233.73,10.37,-0.4,0.03,2.9,1.03,0,"1 nonsynonymous","S45M",1
"lib1","SARS-CoV-2","CAAATGCCTCCGATGG",2,39.63,10.18,-0.59,0.06,2.88,1,0,">1 nonsynonymous","S36H D98Y",2
"lib1","SARS-CoV-2","CAAATGCCTTGTGAGT",2,153.06,10.73,-0.03,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATGCGCTTTTAAA",7,96.98,9.82,-0.94,0.09,2.37,1.06,0,"1 nonsynonymous","D34L",1
"lib1","SARS-CoV-2","CAAATGCGGACAAATA",4,21.48,8.64,-2.12,0.29,1.55,1.07,0.02,">1 nonsynonymous","C49I Q144S T148H",3
"lib1","SARS-CoV-2","CAAATGCGTTCACCTA",3,19.63,8.63,-2.13,0.21,1.66,1.2,0.03,">1 nonsynonymous","A14G N107T",2
"lib1","SARS-CoV-2","CAAATGCGTTTTGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S41V N107*",2
"lib1","SARS-CoV-2","CAAATGCTATATACCA",1,38.43,6.85,-3.91,0.52,1.5,1.13,0.04,">1 nonsynonymous","S19R L38F W106H T201K",4
"lib1","SARS-CoV-2","CAAATGCTATCGATAC",4,61.21,8.44,-2.33,0.14,2.66,1.08,0.01,">1 nonsynonymous","T100H Y175S",2
"lib1","SARS-CoV-2","CAAATGCTATTAAATT",2,0.14,NA,NA,NA,NA,NA,NA,"stop","E10S V37Y S53I L95V T148* G155V",6
"lib1","SARS-CoV-2","CAAATGCTCAAACATA",5,50.13,8.71,-2.05,0.21,1.87,1.18,0.02,">1 nonsynonymous","A42N D112S",2
"lib1","SARS-CoV-2","CAAATGCTTAGGCGAG",1,9.39,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","F12Q C31T V37H A42V P161I Y178C",6
"lib1","SARS-CoV-2","CAAATGCTTTAGAAAC",3,32.72,10.8,0.04,0.04,2.92,1.04,0,"1 nonsynonymous","A22M",1
"lib1","SARS-CoV-2","CAAATGGACGTCTTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50M P149* E154S",3
"lib1","SARS-CoV-2","CAAATGGAGCACCATA",7,136.29,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P82A P177L",2
"lib1","SARS-CoV-2","CAAATGGATAAGACTA",4,0,NA,NA,NA,NA,NA,NA,"stop","W23* K26I C61Y N107R L122* S139K",6
"lib1","SARS-CoV-2","CAAATGGCCGGTAAAT",3,28.1,10.7,-0.07,0.1,2.86,1.07,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","CAAATGGCGAAGGTGA",4,36.57,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9V D98K G172T",3
"lib1","SARS-CoV-2","CAAATGGTAATAAAAA",1,17.04,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N4M T46V Q84H A105K G155Y N171S",6
"lib1","SARS-CoV-2","CAAATGTAAATCGTTA",1,28.56,10.74,-0.03,0.11,2.95,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAATGTAATATATTT",5,31.13,8.45,-2.31,0.3,1.5,1.14,0.02,">1 nonsynonymous","I104C L122R D137S",3
"lib1","SARS-CoV-2","CAAATGTACACGAACG",4,18.08,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S36L V103W I142F",3
"lib1","SARS-CoV-2","CAAATGTACGGGGGTG",1,5.66,10.6,-0.16,0.38,2.86,1,0.01,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CAAATGTATTACTTCC",2,75.01,10.57,-0.2,0.04,2.94,1.03,0,">1 nonsynonymous","T63S A105T",2
"lib1","SARS-CoV-2","CAAATGTCAAGCCATA",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S L122I E186I",3
"lib1","SARS-CoV-2","CAAATGTCACTAAAAA",8,83.29,10.69,-0.07,0.05,2.89,1.06,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","CAAATGTCATTATTTT",3,36.96,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y165N P177S",2
"lib1","SARS-CoV-2","CAAATGTCTACATAAT",5,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10P R136P",2
"lib1","SARS-CoV-2","CAAATGTCTGATATGA",2,41.28,10.75,-0.01,0.1,2.9,1.05,0,">1 nonsynonymous","L5R S53D",2
"lib1","SARS-CoV-2","CAAATGTGGAGACAAA",2,4.1,NA,NA,NA,NA,NA,NA,"stop","N110L P161S R179* T201L",4
"lib1","SARS-CoV-2","CAAATGTTCCGCTATT",1,16.44,9.77,-1,0.12,2.54,1,0.01,">1 nonsynonymous","V65G D90F Q163R P191N",4
"lib1","SARS-CoV-2","CAAATTAAAAATGAAA",4,14.24,9.99,-0.77,0.1,2.03,1.07,0,">1 nonsynonymous","N1R E10V C61R T100S",4
"lib1","SARS-CoV-2","CAAATTAAAAGAAGTA",4,115.48,9.02,-1.75,0.09,1.8,1.12,0,">1 nonsynonymous","C61H W106V F126L",3
"lib1","SARS-CoV-2","CAAATTAAACAAAGCC",3,15.91,10.11,-0.65,0.11,2.85,1.04,0,">1 nonsynonymous","F126H E141N",2
"lib1","SARS-CoV-2","CAAATTAAAGTCGTAA",3,1.13,NA,NA,NA,NA,NA,NA,"stop","S43A D98* P149R",3
"lib1","SARS-CoV-2","CAAATTAAATGTATGA",3,24.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N92G I104S F167M",3
"lib1","SARS-CoV-2","CAAATTAAGAACCGAA",1,2.74,NA,NA,NA,NA,NA,NA,"stop","P54* G116P",2
"lib1","SARS-CoV-2","CAAATTAAGCATAGAT",7,190.15,10.07,-0.69,0.06,2.64,1.04,0,">1 nonsynonymous","I88L T201D",2
"lib1","SARS-CoV-2","CAAATTAAGTGAACAG",5,51.4,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N40L F167A",2
"lib1","SARS-CoV-2","CAAATTAATATAACCA",3,63.96,9.94,-0.82,0.08,2.44,1.03,0,">1 nonsynonymous","F134K T140C",2
"lib1","SARS-CoV-2","CAAATTAATCCTCATG",7,78.39,8.59,-2.17,0.21,1.5,1.21,0.02,">1 nonsynonymous","T55S T85G I88A",3
"lib1","SARS-CoV-2","CAAATTACACGTAGGA",7,94.96,10.72,-0.05,0.07,2.91,1.07,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","CAAATTACCGTGAGCC",7,2.2,NA,NA,NA,NA,NA,NA,"stop","G83N C158*",2
"lib1","SARS-CoV-2","CAAATTACGCTTTTAT",2,29.37,6,-4.76,1.36,1.5,1.15,0.02,">1 nonsynonymous","F17L N40Y K56F E76T W106S",5
"lib1","SARS-CoV-2","CAAATTAGAAGCACGG",7,68.69,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167E",1
"lib1","SARS-CoV-2","CAAATTAGGACATACA",1,26.92,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y91A L131E C158L",3
"lib1","SARS-CoV-2","CAAATTATAGAATCTA",5,124.06,10.78,0.02,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATTATAGACGATT",5,52.2,9.82,-0.95,0.14,1.97,1.08,0.01,">1 nonsynonymous","S45L K56G G83Q",3
"lib1","SARS-CoV-2","CAAATTATGAAAACTA",2,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K A18G N92D S113R G152I",5
"lib1","SARS-CoV-2","CAAATTCAAGCACCTG",2,4.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","CAAATTCATCCCGGCG",7,32.84,7.76,-3,0.35,1.56,1.15,0.04,">1 nonsynonymous","S41G F62W D90F N118I K128D K199G",6
"lib1","SARS-CoV-2","CAAATTCATTAGTTTC",8,2.41,NA,NA,NA,NA,NA,NA,"stop","R27L S41P N64Q V103* Y159T",5
"lib1","SARS-CoV-2","CAAATTCCAGCATTTC",4,87.66,10.79,0.03,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATTCCATTTTACC",9,181.13,10.79,0.02,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATTCCCCGCACAC",6,46.98,10.23,-0.54,0.08,2.89,1,0,"1 nonsynonymous","I142Q",1
"lib1","SARS-CoV-2","CAAATTCCCGCTGACT",8,139.16,9.52,-1.24,0.15,1.5,1.05,0.01,">1 nonsynonymous","P54G E76A Q144S H189P",4
"lib1","SARS-CoV-2","CAAATTCCCTGGTGCA",1,50.78,10.66,-0.1,0.03,2.94,1.02,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","CAAATTCCGGCGACTT",2,27.29,6.24,-4.53,0.98,1.5,1.23,0.04,">1 nonsynonymous","S19I T85R",2
"lib1","SARS-CoV-2","CAAATTCGGATCAATA",4,27.51,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N13C C31I V37S T63D F126L C150P Q163I",7
"lib1","SARS-CoV-2","CAAATTCGTGAACAAT",7,84.42,10.72,-0.05,0.04,2.91,1.07,0,">1 nonsynonymous","V37T N64S S147E",3
"lib1","SARS-CoV-2","CAAATTCGTGGCGTAT",14,150.6,8.94,-1.83,0.16,1.5,1.11,0.01,">1 nonsynonymous","F12S F17L",2
"lib1","SARS-CoV-2","CAAATTCTAAAGTGAC",3,86.19,10.1,-0.66,0.08,2.69,1.02,0,">1 nonsynonymous","S36P D98T",2
"lib1","SARS-CoV-2","CAAATTCTACGTCACA",4,0.43,NA,NA,NA,NA,NA,NA,"stop","A14I N64V E135* F160V G174E",5
"lib1","SARS-CoV-2","CAAATTCTAGAAATAT",6,74.46,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A89V G172V",2
"lib1","SARS-CoV-2","CAAATTCTGCAAAGTA",8,64.75,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I72G P149R",2
"lib1","SARS-CoV-2","CAAATTCTTAAGGTTT",3,38.66,6,-4.76,0.61,3,1.13,0,">1 nonsynonymous","V20Y K48W T85R N109I T148A",5
"lib1","SARS-CoV-2","CAAATTGAACCGCGCT",3,29.98,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P82F F99I",2
"lib1","SARS-CoV-2","CAAATTGAATATGTAT",3,58.63,9.07,-1.7,0.15,1.57,1.16,0.01,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","CAAATTGACCTACTAA",7,83.52,9.28,-1.48,0.18,1.69,1.12,0.01,">1 nonsynonymous","Q84R S139N G152L F160L",4
"lib1","SARS-CoV-2","CAAATTGACTGTCCAG",7,91.22,8.37,-2.39,0.14,1.7,1.15,0.01,">1 nonsynonymous","N40C T55P L122S Y143V P149A",5
"lib1","SARS-CoV-2","CAAATTGAGCCCCCAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","Y35T S43* G83T",3
"lib1","SARS-CoV-2","CAAATTGATGCATGAG",2,59.36,10.66,-0.11,0.11,2.79,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATTGCAAATAGTC",3,108.53,10.17,-0.59,0.04,2.93,1,0,">1 nonsynonymous","G9L K87P",2
"lib1","SARS-CoV-2","CAAATTGCAATCCTCG",10,1.41,NA,NA,NA,NA,NA,NA,"stop","G9R L60F D75* L95A L188K",5
"lib1","SARS-CoV-2","CAAATTGCATAACCCA",11,169.1,10.32,-0.44,0.05,2.76,1.02,0,"1 nonsynonymous","S184D",1
"lib1","SARS-CoV-2","CAAATTGTCGACTATG",7,181.63,10.34,-0.42,0.03,2.89,1.08,0,">1 nonsynonymous","T3H F62L F99W",3
"lib1","SARS-CoV-2","CAAATTTAAAAAAAAG",3,11.55,9.37,-1.39,0.14,2.06,1.13,0.01,">1 nonsynonymous","V11S S41F",2
"lib1","SARS-CoV-2","CAAATTTAAACAAGGA",3,45.89,10.33,-0.43,0.06,2.86,1.04,0,">1 nonsynonymous","Y39Q F62R",2
"lib1","SARS-CoV-2","CAAATTTAAATAGACA",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N13D Q144C",3
"lib1","SARS-CoV-2","CAAATTTAGAAGAGAA",4,18.1,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","I104D P177T T201D",3
"lib1","SARS-CoV-2","CAAATTTAGTCAGTCC",4,17.11,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","S69K P82A I104V E141Y",4
"lib1","SARS-CoV-2","CAAATTTCAATTTAGA",3,62.65,6.02,-4.74,1.24,1.5,1.17,0.02,">1 nonsynonymous","A81N S129I F167V",3
"lib1","SARS-CoV-2","CAAATTTCAGCCGGTA",2,26.16,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8T L57Y D68E P96N E141C N171S",6
"lib1","SARS-CoV-2","CAAATTTCCTCTGCTA",6,1.29,NA,NA,NA,NA,NA,NA,"stop","P54* F70G D90I A105T",4
"lib1","SARS-CoV-2","CAAATTTGATCCTAAA",4,120.97,10.67,-0.09,0.09,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAATTTGCACGGAGG",2,73.24,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62I G117V I142D",3
"lib1","SARS-CoV-2","CAAATTTGTACTCAGC",8,101.89,9.16,-1.6,0.15,1.5,1.11,0.01,">1 nonsynonymous","I2K Y93L N130K",3
"lib1","SARS-CoV-2","CAAATTTTCAAGAGAC",5,47.73,10.78,0.02,0.11,2.64,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CAAATTTTCCCATAAC",1,21.75,9.97,-0.8,0.16,1.92,1.06,0.01,">1 nonsynonymous","L5H L38K",2
"lib1","SARS-CoV-2","CAAATTTTTCCTCAAA",9,57.27,9.01,-1.75,0.15,1.65,1.14,0.01,">1 nonsynonymous","F8S N64D D97M",3
"lib1","SARS-CoV-2","CAACAAAAAAAATTTG",5,97.7,10.33,-0.43,0.05,2.89,1.02,0,">1 nonsynonymous","S43L C61A K87W P149E T201N",5
"lib1","SARS-CoV-2","CAACAAAAAAGAGGAG",3,1.65,NA,NA,NA,NA,NA,NA,"stop","V52I K114*",2
"lib1","SARS-CoV-2","CAACAAAAAAGTGAGA",3,11.71,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V52L L57F N107L E141L",4
"lib1","SARS-CoV-2","CAACAAAAACCAGGGA",1,34.65,7.86,-2.9,0.21,1.5,1.11,0.01,">1 nonsynonymous","R73W I138V K199R",3
"lib1","SARS-CoV-2","CAACAAAAAGATATGC",11,143.51,10.81,0.04,0.04,2.95,1.02,0,">1 nonsynonymous","D98T P197V",2
"lib1","SARS-CoV-2","CAACAAAAAGGAGGGC",1,4.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","CAACAAAAAGGGGAAA",11,178.66,10.72,-0.05,0.06,2.94,1.04,0,">1 nonsynonymous","N130V T140D",2
"lib1","SARS-CoV-2","CAACAAAACATCAGCG",1,3.36,NA,NA,NA,NA,NA,NA,"stop","N64F E76N T100P G117S P149M S200*",6
"lib1","SARS-CoV-2","CAACAAAACGAACCAC",1,29.6,10.78,0.02,0.07,2.89,1.07,0,">1 nonsynonymous","T55I N64S T201D",3
"lib1","SARS-CoV-2","CAACAAAACTAACCAT",5,138.52,10.77,0,0.07,2.91,1.05,0,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","CAACAAAAGAACGACT",3,37.9,7.03,-3.74,0.32,1.5,1.14,0.03,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","CAACAAAAGATGATCC",4,13.29,NA,NA,NA,NA,NA,NA,"stop","F12* Y21E L122R",3
"lib1","SARS-CoV-2","CAACAAAAGCCCAATG",9,189.13,10.71,-0.05,0.05,2.91,1.02,0,"1 nonsynonymous","S139K",1
"lib1","SARS-CoV-2","CAACAAAAGCGACGAT",5,55.56,10.59,-0.18,0.05,2.87,1.11,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","CAACAAAATAGACAAT",1,30.22,8.76,-2.01,0.17,1.89,1.12,0.01,">1 nonsynonymous","Q79L G86S",2
"lib1","SARS-CoV-2","CAACAAAATTGCTCTC",2,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","CAACAAACAACGCTTT",6,169.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W23C K114V Q176V K199T",4
"lib1","SARS-CoV-2","CAACAAACAATCACAT",4,61.17,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A14Q K26R G86F Y123E",4
"lib1","SARS-CoV-2","CAACAAACCAATACCA",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L T46C D98Y Q163N K199E",5
"lib1","SARS-CoV-2","CAACAAACCAGTCATT",1,5.45,7.17,-3.59,0.67,1.5,1.13,0.04,">1 nonsynonymous","V65T W106N N120K",3
"lib1","SARS-CoV-2","CAACAAACGTTCTAAT",4,49.64,10.61,-0.15,0.03,2.95,1.02,0,">1 nonsynonymous","T140S A145V",2
"lib1","SARS-CoV-2","CAACAAAGATACACCA",10,371.5,10.78,0.01,0.06,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACAAAGATGACAAG",4,40.74,8.26,-2.5,0.23,1.52,1.19,0.01,">1 nonsynonymous","F12R Y39S T170S",3
"lib1","SARS-CoV-2","CAACAAAGATTACATT",5,126.98,10.75,-0.02,0.03,2.94,1.02,0,">1 nonsynonymous","P54T V153S",2
"lib1","SARS-CoV-2","CAACAAAGATTGAAAT",2,13.47,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N1A Y66F A81G G86Q",4
"lib1","SARS-CoV-2","CAACAAAGCTTAGACG",4,33.81,9.62,-1.14,0.05,2.86,1.06,0,"1 nonsynonymous","Y119I",1
"lib1","SARS-CoV-2","CAACAAAGTAGTGTGC",8,165.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44L S129T C158V Y175N",4
"lib1","SARS-CoV-2","CAACAAAGTTATTTAA",5,30.16,10.67,-0.1,0.05,2.91,1.04,0,">1 nonsynonymous","N40P T140E",2
"lib1","SARS-CoV-2","CAACAAATAACAATAA",1,7.02,9.74,-1.03,0.13,2.62,1,0.01,">1 nonsynonymous","Y39S Y121K",2
"lib1","SARS-CoV-2","CAACAAATAATCTTGT",4,119.81,9.21,-1.56,0.05,2.83,1.13,0,"1 nonsynonymous","G166H",1
"lib1","SARS-CoV-2","CAACAAATCAAACAAC",1,2.1,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CAACAAATCACATGAC",2,18.84,10.61,-0.15,0.03,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACAAATTAAACAAA",3,39.35,9.88,-0.89,0.42,1.5,1.08,0.07,">1 nonsynonymous","K56M F62D D98L S139L",4
"lib1","SARS-CoV-2","CAACAAATTAACGCGC",2,81.73,10.71,-0.05,0.05,2.9,1.06,0,"1 nonsynonymous","P7R",1
"lib1","SARS-CoV-2","CAACAAATTCACACAA",5,23.5,6.42,-4.34,0.52,1.5,1.13,0.03,">1 nonsynonymous","D97K L131R",2
"lib1","SARS-CoV-2","CAACAAATTGCAAACA",12,177.68,10.59,-0.18,0.04,2.88,1.05,0,">1 nonsynonymous","D75S T85K K132D",3
"lib1","SARS-CoV-2","CAACAACACATATATA",1,12.93,10.31,-0.46,0.14,2.83,1.12,0.01,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","CAACAACAGCTAAGCT",14,128.42,8.93,-1.83,0.21,1.5,1.11,0.02,">1 nonsynonymous","S41K Y50I N120S",3
"lib1","SARS-CoV-2","CAACAACAGCTCATAA",7,1.43,NA,NA,NA,NA,NA,NA,"stop","W106* Y175V L183I",3
"lib1","SARS-CoV-2","CAACAACCCTCAAGGA",3,65.69,10.28,-0.49,0.04,2.84,1.06,0,">1 nonsynonymous","G9P A81Q",2
"lib1","SARS-CoV-2","CAACAACGAAGTGAAG",1,10.58,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","S41T N92F",2
"lib1","SARS-CoV-2","CAACAACGCTTACGGC",1,10.29,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N13H S19V V32R",3
"lib1","SARS-CoV-2","CAACAACTACGGGCAG",2,45.87,10.45,-0.32,0.08,2.69,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACAACTCACCACAT",3,10.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C49R C61Y D97R K114P",4
"lib1","SARS-CoV-2","CAACAACTGCTAACCT",8,34.82,10.13,-0.64,0.09,2.69,1.02,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","CAACAACTGTCCAAAA",5,74.46,6.08,-4.69,0.61,1.5,1.16,0.01,">1 nonsynonymous","D112T G152V",2
"lib1","SARS-CoV-2","CAACAACTGTTCGATG",7,195.73,10.7,-0.06,0.04,2.91,1.03,0,">1 nonsynonymous","S53V D98S",2
"lib1","SARS-CoV-2","CAACAAGAACATAAAA",3,7.2,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3M C6I V77A S139T T201P",5
"lib1","SARS-CoV-2","CAACAAGAAGAACTAG",3,62.93,9.48,-1.29,0.11,2.69,1.12,0.01,"1 nonsynonymous","R73L",1
"lib1","SARS-CoV-2","CAACAAGAATATATAA",3,64.14,10.36,-0.41,0.04,2.93,1.01,0,">1 nonsynonymous","A14I T85S",2
"lib1","SARS-CoV-2","CAACAAGACTTACAAT",3,71.06,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L60P D75L S113T F167G",4
"lib1","SARS-CoV-2","CAACAAGCCAAAGGTT",5,20.6,10.7,-0.06,0.07,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACAAGCCTGAATAA",9,47.45,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6R S41R D90S K114R P161L",5
"lib1","SARS-CoV-2","CAACAAGCTTTAAAGC",5,51.82,8.85,-1.91,0.2,1.5,1.06,0.02,">1 nonsynonymous","L5V G51P K132L G174S",4
"lib1","SARS-CoV-2","CAACAAGGAAAATTAT",1,69.74,10.75,-0.02,0.05,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACAAGGAACTAGAA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","T15* Y119E N130L",3
"lib1","SARS-CoV-2","CAACAAGGCCTGACCG",6,82.85,10.98,0.21,0.07,2.89,1.07,0,">1 nonsynonymous","Y123F T148K",2
"lib1","SARS-CoV-2","CAACAAGGTTCAAACA",4,92.2,10.86,0.09,0.1,2.88,1.07,0,"1 nonsynonymous","N171T",1
"lib1","SARS-CoV-2","CAACAAGGTTCATACA",1,37.83,10.63,-0.13,0.11,2.93,1.01,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","CAACAAGTAAGCATGG",1,0.18,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","CAACAAGTAGAGACTT",5,43.62,10.69,-0.07,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACAAGTCTGAACGA",4,25.94,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F62G C158E",2
"lib1","SARS-CoV-2","CAACAATAACTTGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CAACAATACGTAACAA",1,11.43,8.26,-2.5,0.19,2.2,1.24,0.03,">1 nonsynonymous","N40I F62Y G166T",3
"lib1","SARS-CoV-2","CAACAATAGGTCCTAA",2,15.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71D G146R",2
"lib1","SARS-CoV-2","CAACAATATAAGTTAA",2,50.67,10.73,-0.04,0.05,2.88,1.06,0,">1 nonsynonymous","I28F S43K N110F",3
"lib1","SARS-CoV-2","CAACAATATAGGGGTT",2,1.95,NA,NA,NA,NA,NA,NA,"stop","C6K A42C S200*",3
"lib1","SARS-CoV-2","CAACAATATCCGTTAA",9,25.92,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","I88Q R179I",2
"lib1","SARS-CoV-2","CAACAATATTTAATAG",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R T148N",2
"lib1","SARS-CoV-2","CAACAATCAAAGCCTC",2,32.23,9.73,-1.04,0.09,2.63,1.09,0.01,">1 nonsynonymous","K48R K56M L122D Q144D",4
"lib1","SARS-CoV-2","CAACAATCAGTGGACC",2,109.05,9.21,-1.56,0.16,1.63,1.17,0.01,">1 nonsynonymous","F12L T55P Y123C",3
"lib1","SARS-CoV-2","CAACAATCCGCGTTCC",3,5.12,6.47,-4.29,2,3,1.17,0.01,">1 nonsynonymous","F44S V52Q R124S",3
"lib1","SARS-CoV-2","CAACAATCGACGGTTA",2,15.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I104V S164F F185A",3
"lib1","SARS-CoV-2","CAACAATCTGTATAGG",7,160.27,6,-4.76,1.41,1.5,1.25,0.03,">1 nonsynonymous","G86A D97R D137C S184E",4
"lib1","SARS-CoV-2","CAACAATGACACTAAA",3,83.97,10.42,-0.34,0.03,2.88,1.01,0,">1 nonsynonymous","F44Y D98L T201V",3
"lib1","SARS-CoV-2","CAACAATGATACGCAT",4,21.47,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","L122M F167N F185I",3
"lib1","SARS-CoV-2","CAACAATGCAGTCGGT",2,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K I88K",2
"lib1","SARS-CoV-2","CAACAATGCTTTAGGC",24,353.43,9.29,-1.47,0.05,2.85,1.08,0,">1 nonsynonymous","D98V Y119H",2
"lib1","SARS-CoV-2","CAACAATGGATGGATC",10,130.19,7.17,-3.59,0.19,1.5,1.16,0.01,">1 nonsynonymous","S36R F44W R127E",3
"lib1","SARS-CoV-2","CAACAATGGGTAAAAT",3,34.61,8.88,-1.88,0.16,1.6,1.09,0.01,">1 nonsynonymous","A14L N120L Q144K",3
"lib1","SARS-CoV-2","CAACAATTTCACTCCC",7,17.36,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P96F S139Y",2
"lib1","SARS-CoV-2","CAACACAAGGAAAATT",1,11.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12T C49R V153S V173M",4
"lib1","SARS-CoV-2","CAACACACTCTCGTGA",4,42.03,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F12V Y50V",2
"lib1","SARS-CoV-2","CAACACACTTGACGGA",15,224.28,9.17,-1.59,0.07,2.85,1.1,0,">1 nonsynonymous","N120H N157S",2
"lib1","SARS-CoV-2","CAACACAGATATTAAG",13,206.19,8.84,-1.92,0.15,1.5,1.17,0.01,">1 nonsynonymous","N4P Y39L S45W R136A",4
"lib1","SARS-CoV-2","CAACACAGCTTTTGAA",2,31.09,9.41,-1.35,0.13,1.87,1.14,0.01,">1 nonsynonymous","G9S A89P S129E S139F",4
"lib1","SARS-CoV-2","CAACACAGGAAAGAAA",5,50.12,7.58,-3.19,0.21,1.5,1.19,0.01,">1 nonsynonymous","F12E T85K D97R",3
"lib1","SARS-CoV-2","CAACACATAGAAACCT",2,3.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140H",1
"lib1","SARS-CoV-2","CAACACATCCTAAAGC",7,7.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1R L57R G86S",3
"lib1","SARS-CoV-2","CAACACCAAAAGGGAT",1,17.81,10.69,-0.07,0.11,2.86,1.12,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","CAACACCAACACATTC",9,221.18,10.33,-0.43,0.03,2.85,1.05,0,">1 nonsynonymous","V11W V173I",2
"lib1","SARS-CoV-2","CAACACCAACCACAAA",2,67.09,10.47,-0.29,0.05,2.87,1,0,">1 nonsynonymous","I2C D34P K56D P149S",4
"lib1","SARS-CoV-2","CAACACCAATAACAGT",1,59.76,10.82,0.06,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACACCCCTGTTCAA",2,58.89,10.79,0.02,0.07,2.94,1.02,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","CAACACCGAATCAATT",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G D75E D98Y N110D Q168T Y175C",6
"lib1","SARS-CoV-2","CAACACCGCCCATGGA",6,49.86,6.17,-4.59,0.81,1.5,1.14,0.02,">1 nonsynonymous","F99D P149K",2
"lib1","SARS-CoV-2","CAACACCTAAGTCATA",11,191.37,10.24,-0.52,0.05,2.7,1.01,0,"1 nonsynonymous","P133V",1
"lib1","SARS-CoV-2","CAACACCTATTCAGAA",1,17.51,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G9L I88Q L122S T148A V181F",5
"lib1","SARS-CoV-2","CAACACCTCAGATACC",5,36.34,8.8,-1.96,0.16,1.75,1.13,0.01,"1 nonsynonymous","V71S",1
"lib1","SARS-CoV-2","CAACACCTGCAACCCC",4,1.33,NA,NA,NA,NA,NA,NA,"stop","F44N K114P L122*",3
"lib1","SARS-CoV-2","CAACACCTTAATTTTA",5,74.91,9.38,-1.38,0.05,2.81,1.11,0,">1 nonsynonymous","T63S Y121P T201S",3
"lib1","SARS-CoV-2","CAACACGATACGCAAT",4,63.15,10.22,-0.54,0.04,2.91,1.05,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","CAACACGCATTTCTGA",1,14.49,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S36C N107T Q168V",3
"lib1","SARS-CoV-2","CAACACGGACCACGTG",1,0.43,NA,NA,NA,NA,NA,NA,"stop","S43P V65W S139* C150R",4
"lib1","SARS-CoV-2","CAACACGGACTTATAG",5,0.22,NA,NA,NA,NA,NA,NA,"stop","F44K V180*",2
"lib1","SARS-CoV-2","CAACACGGCTTCCAGT",4,3,NA,NA,NA,NA,NA,NA,"stop","L5D Q176*",2
"lib1","SARS-CoV-2","CAACACGGGTTGCATT",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57I E76Y I104T",3
"lib1","SARS-CoV-2","CAACACTAACTTACAT",13,178.19,10.76,0,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACACTAAGTACTAT",5,87.87,7.54,-3.23,0.25,1.5,1.04,0.02,">1 nonsynonymous","K48R N107Y",2
"lib1","SARS-CoV-2","CAACACTAATGAATAT",4,8.97,NA,NA,NA,NA,NA,NA,"stop","I2* K87G Y175K",3
"lib1","SARS-CoV-2","CAACACTAATTGCCTT",1,130.52,10.28,-0.48,0.05,2.92,1.01,0,"1 nonsynonymous","A145E",1
"lib1","SARS-CoV-2","CAACACTAGCGTTTGA",2,3.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAACACTATTTTATAT",3,29.67,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G74N T100L A105S R127L",4
"lib1","SARS-CoV-2","CAACACTCAATAGTAG",1,11.19,10.13,-0.63,0.1,2.68,1.08,0,"1 nonsynonymous","F17V",1
"lib1","SARS-CoV-2","CAACACTGCTATAAAA",2,36.37,10.82,0.06,0.07,2.93,1.06,0,">1 nonsynonymous","S43M Q168F",2
"lib1","SARS-CoV-2","CAACACTTAACAAGAT",6,42.64,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K56M Y93W Q144T",3
"lib1","SARS-CoV-2","CAACACTTAACCGAAA",9,5.71,NA,NA,NA,NA,NA,NA,"stop","A14* A42G",2
"lib1","SARS-CoV-2","CAACACTTAGGTTAAA",8,1.08,NA,NA,NA,NA,NA,NA,"stop","Y39* Y93V",2
"lib1","SARS-CoV-2","CAACACTTCCGTCCAG",10,72.06,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V65E V77G G152Y",3
"lib1","SARS-CoV-2","CAACACTTCTACAATT",1,34.25,10.79,0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACACTTGCCAACTT",3,55.99,10.45,-0.32,0.06,2.91,1.07,0,">1 nonsynonymous","L122V F156L",2
"lib1","SARS-CoV-2","CAACAGAACGCAAAGT",2,40.31,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S36F D90L C158S",3
"lib1","SARS-CoV-2","CAACAGAATTGCCCAA",5,25.03,6,-4.76,2,3,1.07,0,">1 nonsynonymous","G51Y F126R I142T F160G",4
"lib1","SARS-CoV-2","CAACAGACCCTACAAT",2,14.48,9.15,-1.61,0.13,2.8,1.18,0.01,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","CAACAGACTTTCGATT",2,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Q F62S Q84E N107H S147R",5
"lib1","SARS-CoV-2","CAACAGAGAGAATAAA",5,51.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W23C I28R N171Q Y178A",4
"lib1","SARS-CoV-2","CAACAGATAGAATTTG",3,50.06,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","CAACAGCAATAAACGG",1,20.07,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","N4R Y91P",2
"lib1","SARS-CoV-2","CAACAGCAATATCTAG",8,22.42,6.07,-4.69,1.03,1.5,1.21,0.03,">1 nonsynonymous","Y35L V52R V103L",3
"lib1","SARS-CoV-2","CAACAGCAGACAAAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36C N107T Q168V",3
"lib1","SARS-CoV-2","CAACAGCAGGATTACA",5,116.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R27A G166V Q176V S200I",4
"lib1","SARS-CoV-2","CAACAGCGAACGCTAC",3,41.13,10.17,-0.6,0.09,2.78,1,0,">1 nonsynonymous","L5Y V11W A22Q F44L",4
"lib1","SARS-CoV-2","CAACAGCGCCTGATCC",9,153.41,10.71,-0.06,0.04,2.9,1.05,0,">1 nonsynonymous","T55W N130S",2
"lib1","SARS-CoV-2","CAACAGCTTACATCCG",5,15.85,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","D34Y N64P P96I F160V",4
"lib1","SARS-CoV-2","CAACAGGAAATCATAG",3,33.52,6.81,-3.95,0.48,1.5,1.29,0.03,">1 nonsynonymous","F167N A190D",2
"lib1","SARS-CoV-2","CAACAGGCACTATTTG",1,15.96,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y39G N64W G86R",3
"lib1","SARS-CoV-2","CAACAGGTCAAAGACC",5,54.35,10.66,-0.11,0.03,2.99,1,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","CAACAGGTGAAATTCT",3,8.05,10.26,-0.5,0.07,2.95,1,0,">1 nonsynonymous","N1S T15V",2
"lib1","SARS-CoV-2","CAACAGTAACCTTACA",6,117.48,10.4,-0.36,0.03,2.82,1.01,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","CAACAGTAAGACCCGC",5,152.53,10.69,-0.08,0.04,2.92,1.04,0,">1 nonsynonymous","N64Q K132L",2
"lib1","SARS-CoV-2","CAACAGTACCATCCAC",10,191.61,8.55,-2.22,0.08,2.56,1.09,0,"1 nonsynonymous","S108D",1
"lib1","SARS-CoV-2","CAACAGTATTTCAGCC",2,31.64,6.07,-4.7,0.89,1.5,1.25,0.02,">1 nonsynonymous","N4I V181S",2
"lib1","SARS-CoV-2","CAACAGTCGTTAGATG",5,32.85,7.09,-3.67,0.37,1.6,1.32,0.03,">1 nonsynonymous","C31L E135G P191I",3
"lib1","SARS-CoV-2","CAACAGTGCGTCTTAA",7,4.87,NA,NA,NA,NA,NA,NA,"stop","I2A K94Y F99* A105R R127K S200L",6
"lib1","SARS-CoV-2","CAACAGTGTGTGTTAA",1,44.23,10.59,-0.17,0.08,2.92,1.06,0,"1 nonsynonymous","S53C",1
"lib1","SARS-CoV-2","CAACAGTTTGCGCGAC",2,19.85,10.55,-0.21,0.06,3,1,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","CAACATAAATAGTCCC",2,22.18,8.07,-2.7,0.33,1.66,1.24,0.04,"1 nonsynonymous","S108F",1
"lib1","SARS-CoV-2","CAACATAACTTGGATT",1,8.66,10.72,-0.04,0.28,2.91,1,0.06,"1 nonsynonymous","C150D",1
"lib1","SARS-CoV-2","CAACATACACTAAAGC",1,8.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6I R16W C61F G116H N130F S164Q K198L",7
"lib1","SARS-CoV-2","CAACATACCATGTGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib1","SARS-CoV-2","CAACATAGAATCGCCT",2,2.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118M",1
"lib1","SARS-CoV-2","CAACATAGTGATGCAT",1,47.17,9.87,-0.89,0.04,2.7,1.04,0,">1 nonsynonymous","G83N P161E",2
"lib1","SARS-CoV-2","CAACATATAATATACA",2,60.08,7.5,-3.27,0.14,1.8,1.14,0.01,">1 nonsynonymous","V37G S139P",2
"lib1","SARS-CoV-2","CAACATATACAACTAA",3,6.15,10.87,0.11,0.26,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACATATCCTACAAA",1,31.61,10.77,0,0.07,2.93,1,0,">1 nonsynonymous","N4H A190T",2
"lib1","SARS-CoV-2","CAACATATTCGAATAT",1,43.86,9.64,-1.13,0.13,1.96,1.06,0.01,">1 nonsynonymous","A14T A67T",2
"lib1","SARS-CoV-2","CAACATATTCGCCCTT",3,61.8,10.45,-0.32,0.05,2.87,1.06,0,">1 nonsynonymous","T85P T100M",2
"lib1","SARS-CoV-2","CAACATATTGATACAC",1,10.65,9.33,-1.44,0.24,1.7,1.32,0.03,">1 nonsynonymous","E141V L162T",2
"lib1","SARS-CoV-2","CAACATATTTAGTGTT",6,35.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41D D90M I104R D112N Y119S R127P",6
"lib1","SARS-CoV-2","CAACATCACTAACAAA",8,113.73,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S36P R127V",2
"lib1","SARS-CoV-2","CAACATCAGTTACCAC",2,14.08,10.17,-0.59,0.14,3,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","CAACATCCAACGCGGT",6,11.29,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","I104E G116Y S139K",3
"lib1","SARS-CoV-2","CAACATCCCCTGACTG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","C49K K56F T63V S69L N92* A105N N110A T201F",8
"lib1","SARS-CoV-2","CAACATCCGTCCCCAT",4,104.89,10.01,-0.75,0.09,2.4,1.01,0,"1 nonsynonymous","L95C",1
"lib1","SARS-CoV-2","CAACATCCGTGATGAA",5,29.74,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F8A L60S N107S S147I C158V H189V",6
"lib1","SARS-CoV-2","CAACATCCTTCTATAC",3,28.06,10.72,-0.04,0.05,2.92,1.06,0,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","CAACATCTCTATTATG",4,0.29,NA,NA,NA,NA,NA,NA,"stop","S43V K94* L131N",3
"lib1","SARS-CoV-2","CAACATCTGAATCAAG",6,1.29,NA,NA,NA,NA,NA,NA,"stop","R27Q L60R F99G P161*",4
"lib1","SARS-CoV-2","CAACATCTTCCAGATA",7,32.28,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A14H S69C P161S",3
"lib1","SARS-CoV-2","CAACATCTTCCTTGTT",3,67.02,8.52,-2.24,0.24,1.5,1.12,0.02,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","CAACATGACTAAACCC",5,0.81,NA,NA,NA,NA,NA,NA,"stop","Y91W N107D R124N P133* S200F",5
"lib1","SARS-CoV-2","CAACATGATAATAGAA",5,68.06,6,-4.76,0.7,1.5,1.13,0.01,">1 nonsynonymous","L38P Q144W S164Y",3
"lib1","SARS-CoV-2","CAACATGCAACTAGAA",5,60.61,10.81,0.05,0.04,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACATGCACCCCCAG",5,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y N130Y Q144L F160V T201P",5
"lib1","SARS-CoV-2","CAACATGGCAGTAATC",12,103.59,8.86,-1.91,0.17,1.67,1.15,0.01,">1 nonsynonymous","C6T E10L T100S",3
"lib1","SARS-CoV-2","CAACATGGCGATTTCT",6,108.3,8.24,-2.53,0.23,1.87,1.14,0.02,">1 nonsynonymous","F99L N157S",2
"lib1","SARS-CoV-2","CAACATGTAATAGACG",1,10.39,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13S Q79Y S129Y G155M Q168D",5
"lib1","SARS-CoV-2","CAACATGTCATAGATT",2,51.84,10.47,-0.29,0.06,2.91,1.05,0,">1 nonsynonymous","S41F K87Y",2
"lib1","SARS-CoV-2","CAACATGTGACTGTAT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","S36P L57G P82* G86R G116F",5
"lib1","SARS-CoV-2","CAACATGTTTAATCAA",5,0.67,NA,NA,NA,NA,NA,NA,"stop","Y91C D98L S129* T170M T201Q",5
"lib1","SARS-CoV-2","CAACATTAAAAAAAAT",2,30.24,8.16,-2.61,0.15,2.11,1.11,0.01,">1 nonsynonymous","L5Y F44N Y119L T148M",4
"lib1","SARS-CoV-2","CAACATTAGTTTAACC",1,35.1,10.76,-0.01,0.08,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACATTATAACTTGT",6,0.18,NA,NA,NA,NA,NA,NA,"stop","P7H G9* D112H",3
"lib1","SARS-CoV-2","CAACATTCAATATATT",4,44.92,10.68,-0.08,0.08,2.79,1.06,0,">1 nonsynonymous","D90F Q163M",2
"lib1","SARS-CoV-2","CAACATTCATAAAAAA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E D90V N107L K114W S129I I138P E154S",7
"lib1","SARS-CoV-2","CAACATTTAAACAGGA",5,14.39,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","R78S A81M D90I T100P S113Y S139Y",6
"lib1","SARS-CoV-2","CAACATTTACCCCTAT",8,115.74,10.37,-0.39,0.05,2.89,1.04,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","CAACATTTGCTAAATC",4,265.21,9.32,-1.45,0.05,2.74,1.09,0,"1 nonsynonymous","Q176S",1
"lib1","SARS-CoV-2","CAACCAAAACATCTCC",2,61.82,9.79,-0.97,0.12,2.41,1.05,0,">1 nonsynonymous","F8L N13S D98R I138D",4
"lib1","SARS-CoV-2","CAACCAAAATTTTCAA",4,10.65,8.88,-1.89,0.41,1.78,1.06,0.06,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","CAACCAAATTCTGCGT",1,6.14,11.01,0.24,0.17,2.85,1,0.01,">1 nonsynonymous","Q84S G146S",2
"lib1","SARS-CoV-2","CAACCAACGATCCTAT",3,7.45,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","R16I C61E F99S K114W",4
"lib1","SARS-CoV-2","CAACCAACGCGGCAAA",8,2.46,NA,NA,NA,NA,NA,NA,"stop","Y39I P54* A145N P177A P197V",5
"lib1","SARS-CoV-2","CAACCAACGGTAAGTC",1,2.77,NA,NA,NA,NA,NA,NA,"stop","S41Y N92K F99C S129F E141* G174E",6
"lib1","SARS-CoV-2","CAACCAACTCTATCCG",4,1.7,NA,NA,NA,NA,NA,NA,"stop","P7* S41K K87R K198L",4
"lib1","SARS-CoV-2","CAACCAAGCCCTTCCA",3,2.16,NA,NA,NA,NA,NA,NA,"stop","A33E N107*",2
"lib1","SARS-CoV-2","CAACCAAGTAGATGAG",2,29.59,6,-4.76,2,1.5,1.35,0.07,">1 nonsynonymous","C49Q S139N Y175H",3
"lib1","SARS-CoV-2","CAACCAAGTGATTAAA",5,40.43,9.74,-1.02,0.06,2.61,1.04,0,">1 nonsynonymous","R136Y G174S",2
"lib1","SARS-CoV-2","CAACCAATCCCTTAAG",4,10.81,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","L38S A105Y S113T A145F",4
"lib1","SARS-CoV-2","CAACCACAATAGTAAC",6,81.57,10.46,-0.31,0.05,2.92,1.03,0,"1 nonsynonymous","K87I",1
"lib1","SARS-CoV-2","CAACCACACATTAAAC",10,2.32,NA,NA,NA,NA,NA,NA,"stop","N107R S108* Y165S",3
"lib1","SARS-CoV-2","CAACCACAGTCTTTAT",11,10.41,NA,NA,NA,NA,NA,NA,"stop","T63A P96Y S113* R124V V173H",5
"lib1","SARS-CoV-2","CAACCACATAAACCCT",9,61.84,7.48,-3.29,0.29,1.5,1.11,0.03,">1 nonsynonymous","A22K K94E D97G",3
"lib1","SARS-CoV-2","CAACCACATAGGGGTT",10,132.97,10.4,-0.36,0.03,2.85,1.03,0,">1 nonsynonymous","S36F V37A F134L T140R",4
"lib1","SARS-CoV-2","CAACCACCCAAGAATT",5,175.46,9.38,-1.38,0.07,2.82,1.12,0,">1 nonsynonymous","D90T K114T G166S",3
"lib1","SARS-CoV-2","CAACCACCTGTAAAAT",2,12.1,10.37,-0.4,0.08,2.92,1,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","CAACCACCTTTCCAAT",8,90.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14R S19M R27L C49V F62C L122A C150N Q168H",8
"lib1","SARS-CoV-2","CAACCACTTTTATATC",2,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A N92V D97A Y175S",4
"lib1","SARS-CoV-2","CAACCAGAAAAAGAAA",6,73.11,10.59,-0.17,0.05,2.84,1.02,0,">1 nonsynonymous","Q84T F134Q",2
"lib1","SARS-CoV-2","CAACCAGATAACGTCA",2,32.47,10.46,-0.3,0.08,2.92,1.04,0,"1 nonsynonymous","E10P",1
"lib1","SARS-CoV-2","CAACCAGATTAAACAA",4,10.34,6.82,-3.94,0.55,1.5,1.1,0.03,">1 nonsynonymous","F70G P82Y A105I",3
"lib1","SARS-CoV-2","CAACCAGCAATTGAGA",2,27.22,9,-1.76,0.16,1.5,1.21,0.01,">1 nonsynonymous","A14P N40F",2
"lib1","SARS-CoV-2","CAACCAGCACAAGAAC",10,2.53,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","CAACCAGCACGGTAAA",3,74.99,10.73,-0.03,0.07,2.92,1.07,0,"1 nonsynonymous","E141Q",1
"lib1","SARS-CoV-2","CAACCAGCTGAAAAAT",3,25.72,6,-4.76,1.51,1.89,1.29,0.04,">1 nonsynonymous","S53A V77L P96L S184C",4
"lib1","SARS-CoV-2","CAACCAGGCTAGGAAC",7,100.73,8.97,-1.8,0.09,1.69,1.1,0,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","CAACCAGGTACTATCT",4,59.82,10.66,-0.11,0.1,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACCAGGTTAAGATT",10,121.51,10.07,-0.69,0.06,2.81,1.01,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","CAACCAGTTTAGGCCA",1,61.41,10.12,-0.65,0.07,2.89,1.02,0,">1 nonsynonymous","R78N Q168N",2
"lib1","SARS-CoV-2","CAACCATCAACTGTAA",1,3.47,NA,NA,NA,NA,NA,NA,"stop","I138* F160M",2
"lib1","SARS-CoV-2","CAACCATCGGACCTTA",3,116.55,10.45,-0.32,0.04,2.9,1.04,0,"1 nonsynonymous","F44R",1
"lib1","SARS-CoV-2","CAACCATGGTCGACTT",10,81.41,8.41,-2.36,0.13,2.45,1.11,0.01,">1 nonsynonymous","N1I V37Q D59T T100L L125H T170L",6
"lib1","SARS-CoV-2","CAACCATGTTTTACCT",4,0.97,NA,NA,NA,NA,NA,NA,"stop","Q84K N109V L125S D137*",4
"lib1","SARS-CoV-2","CAACCATTAAACACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","E10W S45T C49* P96H W106L F185S",6
"lib1","SARS-CoV-2","CAACCATTAGGGCAGT",9,97.13,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K114E I138L F167E",3
"lib1","SARS-CoV-2","CAACCATTAGTCATCA",2,13.19,6.73,-4.04,0.65,1.5,1.03,0.08,">1 nonsynonymous","E10Y S41F Y91N A105G",4
"lib1","SARS-CoV-2","CAACCATTATAACGAA",4,52.45,6,-4.76,0.77,1.5,1.1,0,">1 nonsynonymous","N92M Y178N",2
"lib1","SARS-CoV-2","CAACCATTCGGTGGCA",9,2.13,NA,NA,NA,NA,NA,NA,"stop","F8Y D34* D97*",3
"lib1","SARS-CoV-2","CAACCCAAATAACCCG",6,208.3,10.22,-0.54,0.05,2.72,1.04,0,">1 nonsynonymous","L57M Y178N",2
"lib1","SARS-CoV-2","CAACCCAAATGAATGT",4,68.39,8.47,-2.3,0.26,1.5,1,0.03,">1 nonsynonymous","V11S N109F",2
"lib1","SARS-CoV-2","CAACCCACTCCTAAAA",6,46.71,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R27G Y91C D97L D112S E141P",5
"lib1","SARS-CoV-2","CAACCCAGCGCGGAAT",2,20.14,6,-4.76,1.68,1.5,1.19,0.02,">1 nonsynonymous","W23L P54K F62I D90K K128S",5
"lib1","SARS-CoV-2","CAACCCAGGGGAACAC",8,69.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7V R16L S41V S53F L60Q L162Q",6
"lib1","SARS-CoV-2","CAACCCAGTATCTGAT",2,63.68,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","F99Y N120V Q176R",3
"lib1","SARS-CoV-2","CAACCCATAAAAAACA",1,25.11,10.65,-0.11,0.07,2.79,1.16,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACCCATAAACACTT",1,23.77,10.77,0,0.08,2.95,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACCCATAAAGTGTA",5,41.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A89L C158S",2
"lib1","SARS-CoV-2","CAACCCATAGACTGAA",10,122.98,10.83,0.07,0.06,2.93,1.01,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","CAACCCATAGATATAT",3,451.88,6.19,-4.57,0.59,1.5,1.14,0.01,">1 nonsynonymous","C61M T85L D98V L125D",4
"lib1","SARS-CoV-2","CAACCCATAGTCCCAA",1,18.66,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","S43L V52G K94S W106V P149K",5
"lib1","SARS-CoV-2","CAACCCATCTGTCTGT",1,7.35,9.43,-1.33,0.23,2.39,1.34,0.03,">1 nonsynonymous","E10N D59F R78T I138L",4
"lib1","SARS-CoV-2","CAACCCATGAATAATA",2,39.34,10.62,-0.14,0.09,2.91,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CAACCCATTACAAAGG",1,18.58,9.87,-0.89,0.31,1.5,1,0.05,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","CAACCCATTAGGCGGG",1,5.53,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","Y93V",1
"lib1","SARS-CoV-2","CAACCCATTTGTCTTT",1,45.65,9.17,-1.59,0.11,2.68,1.08,0.01,">1 nonsynonymous","P7S K128S G146Y",3
"lib1","SARS-CoV-2","CAACCCCAGGAACGCA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","D68K Y119* T201V",3
"lib1","SARS-CoV-2","CAACCCCATCACCCCT",2,29.09,6.01,-4.75,1.62,1.5,1.22,0.06,">1 nonsynonymous","D98P A105V N151P",3
"lib1","SARS-CoV-2","CAACCCCCTAAGTATT",3,2.78,NA,NA,NA,NA,NA,NA,"stop","I2L V11* K26L S164D",4
"lib1","SARS-CoV-2","CAACCCCGCGGAATCG",9,29.45,7.1,-3.67,0.31,1.5,1.11,0.02,">1 nonsynonymous","K94P N151S",2
"lib1","SARS-CoV-2","CAACCCCTACAAAGAA",1,96.2,9.93,-0.84,0.05,2.85,1.03,0,">1 nonsynonymous","F44N N110S",2
"lib1","SARS-CoV-2","CAACCCCTCGCATCTA",4,25.5,6.48,-4.28,0.62,1.5,1.26,0.04,">1 nonsynonymous","N64L V77Y K128S",3
"lib1","SARS-CoV-2","CAACCCCTGGACTGCA",1,18.49,8.94,-1.83,0.13,2.9,1.09,0.01,"1 nonsynonymous","Y143E",1
"lib1","SARS-CoV-2","CAACCCGGGTAAAGAC",2,15.25,9.11,-1.66,0.13,2.89,1.05,0.01,">1 nonsynonymous","Y119D S129W P149S Q163A",4
"lib1","SARS-CoV-2","CAACCCGTATATTGAA",2,21.5,9.68,-1.08,0.23,1.93,1.24,0.02,">1 nonsynonymous","F17S P54A",2
"lib1","SARS-CoV-2","CAACCCGTTGAATATA",5,18.09,7.26,-3.51,0.52,1.5,1.08,0.07,">1 nonsynonymous","L5W R127V",2
"lib1","SARS-CoV-2","CAACCCTAAACCCAAA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","S45* C61R Y123T F167T",4
"lib1","SARS-CoV-2","CAACCCTAGCTCGAGT",6,67.54,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T55N T140F N157I S164T",4
"lib1","SARS-CoV-2","CAACCCTATAAAAGTA",1,85.29,10.67,-0.09,0.07,2.91,1.06,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","CAACCCTATCAAGTGG",9,133.37,9.57,-1.2,0.09,2.12,1.07,0,">1 nonsynonymous","L60P Y91M",2
"lib1","SARS-CoV-2","CAACCCTCAATCGTAC",2,15.54,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G51N N120M L131W",3
"lib1","SARS-CoV-2","CAACCCTCTTCCTGTG",2,10.14,8.45,-2.31,0.41,1.5,1.1,0.06,">1 nonsynonymous","C49V R136K E154I",3
"lib1","SARS-CoV-2","CAACCCTGTGGTAACA",13,133.94,6.6,-4.16,0.35,1.5,1.21,0.01,">1 nonsynonymous","D34R D59E Y165L",3
"lib1","SARS-CoV-2","CAACCCTTAACTCTGA",6,2.43,NA,NA,NA,NA,NA,NA,"stop","L57R I88* I104N",3
"lib1","SARS-CoV-2","CAACCCTTTAATTCCA",3,10.79,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37K C61D P82Q P149L P169V",5
"lib1","SARS-CoV-2","CAACCCTTTCCATTTA",1,43.75,10.59,-0.18,0.07,2.88,1.05,0,">1 nonsynonymous","V52T C61N T85R",3
"lib1","SARS-CoV-2","CAACCCTTTGTATGCT",4,43.25,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C61L F99T P177H",3
"lib1","SARS-CoV-2","CAACCGAATAAATACA",4,74.48,10.52,-0.24,0.06,2.87,1,0,">1 nonsynonymous","N4G L131M E141N",3
"lib1","SARS-CoV-2","CAACCGAATCTACCAT",1,17.42,10.44,-0.32,0.16,2.83,1,0.01,">1 nonsynonymous","G146S F156L",2
"lib1","SARS-CoV-2","CAACCGAATGTCAACC",4,33.43,6,-4.76,2,3,1.13,0,">1 nonsynonymous","L5G A33G P149L Y165R P177S",5
"lib1","SARS-CoV-2","CAACCGAATTTACTCA",3,112.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28K Y91L N130L Y159V V173F",5
"lib1","SARS-CoV-2","CAACCGACAAAAGTAC",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T I104S C158W G166A",4
"lib1","SARS-CoV-2","CAACCGACATATGTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D L183N",2
"lib1","SARS-CoV-2","CAACCGACATCCCTAC",12,349.87,10.75,-0.02,0.05,2.93,1.04,0,"1 nonsynonymous","A192K",1
"lib1","SARS-CoV-2","CAACCGATGAATCAAT",11,203.09,8.74,-2.03,0.09,2.24,1.13,0,">1 nonsynonymous","S43I T55I K56R R73C",4
"lib1","SARS-CoV-2","CAACCGATGATTAAAA",2,29.63,6.77,-3.99,0.75,1.5,1.16,0.08,">1 nonsynonymous","G101V S108P K114N K128G T140F F160R S184N",7
"lib1","SARS-CoV-2","CAACCGCACAACTCGA",2,23.62,7.11,-3.65,0.33,1.5,1.1,0.03,"1 nonsynonymous","P82F",1
"lib1","SARS-CoV-2","CAACCGCACGCGGGAT",5,27.23,6,-4.76,2,2.17,1.07,0,">1 nonsynonymous","K48Y Y91Q G116I F126M S147N Y178R",6
"lib1","SARS-CoV-2","CAACCGCCAATTAAGG",17,2.66,NA,NA,NA,NA,NA,NA,"stop","S69* F167Q",2
"lib1","SARS-CoV-2","CAACCGCCGCCTAATG",1,16.21,10.55,-0.22,0.08,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACCGGACGGCCCAA",9,49.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T85N L95C K128I R136E C150W",5
"lib1","SARS-CoV-2","CAACCGGAGAAAAGAA",4,14.42,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","K56P D112S",2
"lib1","SARS-CoV-2","CAACCGGCATCTGACG",10,136.23,10.83,0.07,0.05,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CAACCGGTATGACCAC",2,4.09,NA,NA,NA,NA,NA,NA,"stop","V65* Q176L",2
"lib1","SARS-CoV-2","CAACCGGTATTTTTGA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","S41P Y50P T170*",3
"lib1","SARS-CoV-2","CAACCGGTCGAATATT",3,71.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8L F167I",2
"lib1","SARS-CoV-2","CAACCGTATATCAACT",4,19.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R N130C C158H",3
"lib1","SARS-CoV-2","CAACCGTATGAACATT",1,6.2,10.32,-0.45,0.07,2.08,1,0,">1 nonsynonymous","S43M G83W I104W S129C",4
"lib1","SARS-CoV-2","CAACCTAAACCTAGTT",19,278.66,10.74,-0.02,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACCTAACAAAGTGT",5,19.63,10.06,-0.7,0.11,2.14,1.03,0,">1 nonsynonymous","N58K W106R",2
"lib1","SARS-CoV-2","CAACCTAAGTAAACAC",2,7.42,NA,NA,NA,NA,NA,NA,"stop","N24L A33* P133H",3
"lib1","SARS-CoV-2","CAACCTAATTAGCATA",4,52.21,10.58,-0.19,0.05,2.97,1,0,"1 nonsynonymous","G51Q",1
"lib1","SARS-CoV-2","CAACCTACCAATCGCT",2,16.39,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S108P A192S",2
"lib1","SARS-CoV-2","CAACCTACCACTAGTG",8,81.53,9.78,-0.98,0.13,1.75,1.11,0.01,">1 nonsynonymous","K48H D90M Y123L",3
"lib1","SARS-CoV-2","CAACCTACGCCCAGTA",2,14.91,10.6,-0.16,0.08,2.85,1.07,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","CAACCTACTGTTTCTA",3,23.84,8.31,-2.45,0.28,1.76,1.23,0.03,">1 nonsynonymous","P7L A33M V103I G117D",4
"lib1","SARS-CoV-2","CAACCTAGAAACATAA",3,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102K K128C C150Y",3
"lib1","SARS-CoV-2","CAACCTATACGAATTG",3,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V A105R S113Q Y121V S139R",5
"lib1","SARS-CoV-2","CAACCTATATCTCCGT",7,92.46,10.57,-0.19,0.05,2.91,1.03,0,"1 nonsynonymous","L60W",1
"lib1","SARS-CoV-2","CAACCTATATGCTTCC",6,102.52,10.25,-0.51,0.06,2.8,1.04,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","CAACCTATCACCACCC",5,12.25,9.21,-1.56,0.3,1.5,1.14,0.08,">1 nonsynonymous","N1T A33S V77F R136V P169G",5
"lib1","SARS-CoV-2","CAACCTATTGCCACCG",13,361.66,10.51,-0.25,0.03,2.89,1.04,0,">1 nonsynonymous","T15L T148S T201L",3
"lib1","SARS-CoV-2","CAACCTCAAACAACAC",3,19.82,8.27,-2.5,0.21,1.83,1.3,0.02,">1 nonsynonymous","A42V K114F Y121S K128R",4
"lib1","SARS-CoV-2","CAACCTCAAGCCGATG",5,51.9,10.16,-0.6,0.07,2.71,1.08,0,">1 nonsynonymous","S41V T100S",2
"lib1","SARS-CoV-2","CAACCTCACGTTTTTT",2,26.04,7.82,-2.95,0.21,1.5,1.11,0.02,">1 nonsynonymous","I142H Y175E",2
"lib1","SARS-CoV-2","CAACCTCAGAAAACAG",2,31.53,6,-4.76,1.23,1.5,1.12,0.01,">1 nonsynonymous","P169H P177Q",2
"lib1","SARS-CoV-2","CAACCTCATTACGTAT",6,1.87,NA,NA,NA,NA,NA,NA,"stop","L5* T201N",2
"lib1","SARS-CoV-2","CAACCTCCAAGAACTA",1,7.59,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6L S19K",2
"lib1","SARS-CoV-2","CAACCTCGAGGCCTTT",7,114.23,8.67,-2.1,0.08,2.83,1.03,0,">1 nonsynonymous","F44V N157S",2
"lib1","SARS-CoV-2","CAACCTCTGACCCTCG",2,19.98,10.62,-0.14,0.08,2.91,1.01,0,">1 nonsynonymous","F99W T201C",2
"lib1","SARS-CoV-2","CAACCTCTGTAATGAT",1,26.77,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y35K Y121K S139V P149F S200D",5
"lib1","SARS-CoV-2","CAACCTGAGGAAGATG",2,956.83,8.95,-1.81,0.12,1.74,1.12,0.01,">1 nonsynonymous","C6T Y39M Y178L",3
"lib1","SARS-CoV-2","CAACCTGATGCGAGAA",4,55.31,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A42K K56Y G101A R127G",4
"lib1","SARS-CoV-2","CAACCTTACTTTCCAG",2,6.59,6,-4.76,2,3,1.04,0,">1 nonsynonymous","S108E Y121A",2
"lib1","SARS-CoV-2","CAACCTTAGCCGCTCA",6,82.44,6,-4.76,1.69,1.5,1.18,0.02,">1 nonsynonymous","G86P N107W F134T",3
"lib1","SARS-CoV-2","CAACCTTATTCAGGTA",4,77.19,8.51,-2.25,0.12,2.14,1.1,0,">1 nonsynonymous","S19P T100L Y121T",3
"lib1","SARS-CoV-2","CAACCTTCAAGTATAA",1,8.99,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5G G9C S45L K94G G101L F126Y",6
"lib1","SARS-CoV-2","CAACCTTGTTGTACAC",2,11.5,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3L Y159R G174R V180W",4
"lib1","SARS-CoV-2","CAACCTTTGAACGCCT",2,31.45,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I28Q Y35D K48M C150G",4
"lib1","SARS-CoV-2","CAACCTTTGATACATT",7,108.99,10.77,0.01,0.07,2.89,1.08,0,">1 nonsynonymous","V37S A42F",2
"lib1","SARS-CoV-2","CAACGAAAAAACCTTC",3,60.16,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V11A R27L N64A A81I D97P Y121C K128L V173F",8
"lib1","SARS-CoV-2","CAACGAAACAAGTAAA",1,12.75,9.96,-0.81,0.11,2.61,1,0.01,">1 nonsynonymous","E10K G152M C195F",3
"lib1","SARS-CoV-2","CAACGAAACAATAACG",1,6.52,10.69,-0.07,0.16,2.8,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAACGAAACACGCGCG",1,14.77,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S36Q N107L L183A",3
"lib1","SARS-CoV-2","CAACGAAACATCCAGT",4,59.94,10.7,-0.07,0.06,2.97,1,0,">1 nonsynonymous","Y35I G83C",2
"lib1","SARS-CoV-2","CAACGAAAGCATACTT",3,33.39,7.64,-3.12,0.2,1.5,1.07,0.01,">1 nonsynonymous","T100S F126T K132T F156S",4
"lib1","SARS-CoV-2","CAACGAAATAGGTATC",2,33.37,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G101D N110Q P149T",3
"lib1","SARS-CoV-2","CAACGAAATCACAATA",2,13.91,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","W106L N130D P161I",3
"lib1","SARS-CoV-2","CAACGAACAAGCGGTT",2,74.98,10.23,-0.53,0.05,2.9,1.03,0,">1 nonsynonymous","T63I G83A Q168H G174Q",4
"lib1","SARS-CoV-2","CAACGAACAATAATAT",1,24.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19F S29G S43T Y123I T140C",5
"lib1","SARS-CoV-2","CAACGAACGGCCAACT",2,43.54,10.89,0.13,0.08,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACGAAGATCACGTT",6,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M Q84E Y93R F156I",4
"lib1","SARS-CoV-2","CAACGAATAAACGTTA",3,172.89,6.09,-4.68,0.49,1.5,1.16,0.01,">1 nonsynonymous","L5V R127W D137S",3
"lib1","SARS-CoV-2","CAACGAATATATGTCT",6,55.89,9.29,-1.48,0.28,1.51,1.16,0.05,">1 nonsynonymous","A14T F47N S53M K87R G174S P197S",6
"lib1","SARS-CoV-2","CAACGAATCAACTCCG",8,160.79,10.12,-0.65,0.08,2.44,1.04,0,">1 nonsynonymous","N4H S139I",2
"lib1","SARS-CoV-2","CAACGAATCTCCTGTC",8,20.63,6.14,-4.62,0.84,1.5,1.24,0.03,">1 nonsynonymous","G9R V77M P133R",3
"lib1","SARS-CoV-2","CAACGACACTCTGTTC",5,40.09,10.15,-0.61,0.12,2.38,1.11,0.01,">1 nonsynonymous","A18T P133F",2
"lib1","SARS-CoV-2","CAACGACAGAAAAAAT",2,5.98,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","T55V D68A Q168L",3
"lib1","SARS-CoV-2","CAACGACAGATACCCA",2,28.1,10.45,-0.31,0.08,2.84,1.08,0,"1 nonsynonymous","K87I",1
"lib1","SARS-CoV-2","CAACGACCTACGACAG",3,50.39,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","K26V S45Y Y123S P149C F167A G174L",6
"lib1","SARS-CoV-2","CAACGACTAAATACAA",6,153.84,10.07,-0.7,0.08,2.65,1.01,0,">1 nonsynonymous","I2W E10S V32A N120L",4
"lib1","SARS-CoV-2","CAACGACTGTGCCACC",2,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R V103S",2
"lib1","SARS-CoV-2","CAACGAGACCCAAACT",1,33.53,10.65,-0.12,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACGAGCAAGATCTA",2,42.06,10.65,-0.11,0.08,2.87,1.08,0,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","CAACGAGCACACTACA",4,35.07,6.24,-4.53,0.54,1.5,1.12,0.01,">1 nonsynonymous","F12V N107A N151C S184R",4
"lib1","SARS-CoV-2","CAACGAGCGAACGCCA",4,13.23,6,-4.76,1.12,3,1.1,0.01,">1 nonsynonymous","S36G T46L C61V V77R F99T N107Y I142M",7
"lib1","SARS-CoV-2","CAACGAGTAAGTGTCC",3,121.47,10.28,-0.49,0.05,2.79,1.03,0,">1 nonsynonymous","P7L R16M S200G",3
"lib1","SARS-CoV-2","CAACGAGTGGTTCCTA",5,15.83,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","L38P G83L N92S T100Y G116L E141I",6
"lib1","SARS-CoV-2","CAACGAGTTATTAGTA",5,115.95,10.7,-0.06,0.06,2.92,1.05,0,">1 nonsynonymous","P54L F160T",2
"lib1","SARS-CoV-2","CAACGATACCGGCTAA",5,27.17,7.59,-3.17,0.38,1.5,1.08,0.05,">1 nonsynonymous","A14N V20T L95G",3
"lib1","SARS-CoV-2","CAACGATAGCTTGAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5S C49L R136C E186*",4
"lib1","SARS-CoV-2","CAACGATCATGTTGCA",6,86.58,10.25,-0.51,0.06,2.88,1.07,0,">1 nonsynonymous","S43F R78A R136H",3
"lib1","SARS-CoV-2","CAACGATGAAAACTGA",1,2.66,NA,NA,NA,NA,NA,NA,"stop","I104* K114L",2
"lib1","SARS-CoV-2","CAACGATGTGAACGAG",6,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L P133L",2
"lib1","SARS-CoV-2","CAACGATTAAGAGGAA",1,4.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","CAACGATTAAGGCCAT",3,22.72,10.03,-0.73,0.1,2.12,1.04,0,">1 nonsynonymous","N13V T201D",2
"lib1","SARS-CoV-2","CAACGCAAAACACTAT",4,30.8,6.59,-4.17,0.41,1.5,1.12,0.03,">1 nonsynonymous","A81F L125D",2
"lib1","SARS-CoV-2","CAACGCAAATACAATA",2,89.35,6.24,-4.52,0.48,1.5,1.18,0.01,">1 nonsynonymous","F17V W23E T63V K199M",4
"lib1","SARS-CoV-2","CAACGCAAGCAGGTGA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","F99S K114* K198R",3
"lib1","SARS-CoV-2","CAACGCAAGTTGTATT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","C61V I88C N107* C158S P191F",5
"lib1","SARS-CoV-2","CAACGCAATTTTTAAC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V32* P54K",2
"lib1","SARS-CoV-2","CAACGCACAATCAAAG",2,18.23,9.48,-1.29,0.27,1.5,1,0.06,">1 nonsynonymous","F62V K132L D137I Y178L",4
"lib1","SARS-CoV-2","CAACGCACAGAAATCA",14,112.82,9.51,-1.25,0.11,1.77,1.13,0.01,">1 nonsynonymous","E10A T85A S129L N151P",4
"lib1","SARS-CoV-2","CAACGCAGCACGCGGA",2,53.69,9.22,-1.55,0.07,2.75,1.06,0,">1 nonsynonymous","S113R Q168F",2
"lib1","SARS-CoV-2","CAACGCAGGAGAGGTC",4,43.16,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S69R Y91M F99S Y119F I138E E186N",6
"lib1","SARS-CoV-2","CAACGCAGGCCACTAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","T3D Y50* T85M N107S S139L",5
"lib1","SARS-CoV-2","CAACGCCAACGAACAA",3,43.47,10.52,-0.24,0.12,2.65,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAACGCCAATGATCTG",4,25.63,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","C6L N24K D59L L95D Y119L",5
"lib1","SARS-CoV-2","CAACGCCATTTGATAA",6,63.28,10.2,-0.56,0.08,2.57,1,0,"1 nonsynonymous","V71A",1
"lib1","SARS-CoV-2","CAACGCCTGTCGCACG",7,57.86,6.47,-4.3,0.57,1.5,1.25,0.03,"1 nonsynonymous","V182L",1
"lib1","SARS-CoV-2","CAACGCCTTGAACTAT",2,30.66,10.05,-0.72,0.07,2.63,1.03,0,">1 nonsynonymous","K56R P96T",2
"lib1","SARS-CoV-2","CAACGCGAAACATGCT",5,18.1,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C61L L95M F99N",3
"lib1","SARS-CoV-2","CAACGCGAACCGGCGG",2,9.52,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V37G E76R N118L V182R",4
"lib1","SARS-CoV-2","CAACGCGATAAAGTAA",4,41.08,10.11,-0.65,0.09,2.44,1.07,0,">1 nonsynonymous","E141M P161S Y175W",3
"lib1","SARS-CoV-2","CAACGCGCATGTGTTC",4,26.46,8.72,-2.04,0.15,1.5,1,0.02,">1 nonsynonymous","G9Y S41L W106V G116L",4
"lib1","SARS-CoV-2","CAACGCGGGACAATGT",5,71.75,10.73,-0.04,0.06,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACGCTAAAATTTAT",3,73.69,10.68,-0.08,0.05,2.89,1.05,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","CAACGCTAAGAGTGCC",12,83.72,10.91,0.14,0.08,2.9,1.06,0,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","CAACGCTACGATTACT",3,130.14,8.48,-2.28,0.07,2.52,1.11,0,">1 nonsynonymous","R27K T85L Y143S P197K",4
"lib1","SARS-CoV-2","CAACGCTACGTCGCGG",13,57.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L60N P96T A105T C150L",4
"lib1","SARS-CoV-2","CAACGCTGCTCAAACT",1,78.46,10.62,-0.15,0.06,2.91,1.03,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","CAACGCTGGCGATTCT",7,30.65,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10A I72G P82V A105G R124S K132L P149L V180C",8
"lib1","SARS-CoV-2","CAACGCTGTGTGCCCG",2,1.4,NA,NA,NA,NA,NA,NA,"stop","N58R R78H N157* F167S L183P",5
"lib1","SARS-CoV-2","CAACGGAACCTGTACT",7,116.92,10.43,-0.33,0.05,2.87,1.04,0,"1 nonsynonymous","C31P",1
"lib1","SARS-CoV-2","CAACGGAACTCAGATT",5,43.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14V L38M G117V F156M",4
"lib1","SARS-CoV-2","CAACGGAATGCATGTC",5,14.67,9.39,-1.38,0.24,2.03,1.16,0.03,"1 nonsynonymous","F17Q",1
"lib1","SARS-CoV-2","CAACGGATAAAAACCA",6,118.72,10.4,-0.37,0.07,2.74,1.02,0,">1 nonsynonymous","D34A N58D K114R",3
"lib1","SARS-CoV-2","CAACGGATTAAAACCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D K94W L122P G146T",4
"lib1","SARS-CoV-2","CAACGGCAGGGAGATG",3,22.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2F D59K V180Q",3
"lib1","SARS-CoV-2","CAACGGCATAATGCAC",4,5.46,NA,NA,NA,NA,NA,NA,"stop","C6W S29* T63G S139A Y178I T201I",6
"lib1","SARS-CoV-2","CAACGGCTTAAAGCCT",1,53.4,10.93,0.16,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACGGGAAGTAAATT",6,30.88,7.43,-3.34,0.37,1.5,1.01,0.03,">1 nonsynonymous","I28T N40R K87M F134Q V153F L187R",6
"lib1","SARS-CoV-2","CAACGGGCGCTCCCTT",2,34.33,8.64,-2.12,0.11,2.85,1.13,0,"1 nonsynonymous","I142D",1
"lib1","SARS-CoV-2","CAACGGGGCATACAAT",1,37.64,8.27,-2.49,0.13,2.78,1.11,0.01,">1 nonsynonymous","S147A Y175C",2
"lib1","SARS-CoV-2","CAACGGGTACTTCAAA",2,1.74,NA,NA,NA,NA,NA,NA,"stop","F47E V71* L95H A105K C150G G174L",6
"lib1","SARS-CoV-2","CAACGGGTCCTAGACT",2,18,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F12K Y66L S113P E141D Y165L",5
"lib1","SARS-CoV-2","CAACGGGTTATACCAA",2,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30S I104P N151S V180K",4
"lib1","SARS-CoV-2","CAACGGTAAACACATT",5,38.5,6,-4.76,1.91,1.5,1.22,0.02,">1 nonsynonymous","F8L V37K G101M",3
"lib1","SARS-CoV-2","CAACGGTATGAGAAGT",13,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S D98V V103D A145S V153G",5
"lib1","SARS-CoV-2","CAACGGTCAAACTAGT",4,0.17,NA,NA,NA,NA,NA,NA,"stop","R16L L60* C102Q E135S",4
"lib1","SARS-CoV-2","CAACGTAAACCGACTG",3,1.62,NA,NA,NA,NA,NA,NA,"stop","S43H I88N F99Q K128W D137C Q168*",6
"lib1","SARS-CoV-2","CAACGTAACAATACCG",1,15.02,6,-4.76,2,3,1.16,0,">1 nonsynonymous","S43R V103G S147A V182M",4
"lib1","SARS-CoV-2","CAACGTAACAGATAAA",14,293.31,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6G F12C Y93K Y119V",4
"lib1","SARS-CoV-2","CAACGTAATCAGGTAT",2,77.55,10.74,-0.03,0.05,2.91,1.05,0,"1 nonsynonymous","K198S",1
"lib1","SARS-CoV-2","CAACGTACACATTAGG",4,39.45,10.09,-0.67,0.07,2.65,1,0,">1 nonsynonymous","G9R N40T N120I G152N",4
"lib1","SARS-CoV-2","CAACGTACTGGTTAAA",2,16.94,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F99S N171S",2
"lib1","SARS-CoV-2","CAACGTAGAAAAACAT",3,90.73,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A33R F44A G172R",3
"lib1","SARS-CoV-2","CAACGTATGGCCATAC",4,96.69,10.66,-0.1,0.05,2.9,1.06,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CAACGTCACACTTGTG",3,48.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A14R N92A Y119R F167N",4
"lib1","SARS-CoV-2","CAACGTCCCTCAGATT",5,6232,8.73,-2.03,0.07,2.9,1.07,0,">1 nonsynonymous","C61N Y119C T201I",3
"lib1","SARS-CoV-2","CAACGTCGTTGTTTGT",1,17.57,7.22,-3.55,0.51,1.5,1.3,0.07,">1 nonsynonymous","F12E D97I G116S",3
"lib1","SARS-CoV-2","CAACGTCTGGAAACCT",7,55.06,6.01,-4.75,1.13,1.5,1.15,0.02,">1 nonsynonymous","K114L G155N F167L",3
"lib1","SARS-CoV-2","CAACGTCTTACTTCGG",2,17.5,9.88,-0.88,0.18,1.98,1.06,0.03,">1 nonsynonymous","S45K K94N",2
"lib1","SARS-CoV-2","CAACGTGAACACCAAG",1,14.98,10.21,-0.56,0.06,2.93,1.03,0,"1 nonsynonymous","E154I",1
"lib1","SARS-CoV-2","CAACGTGGGCCTTCGT",8,142.87,10.76,0,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACGTTCGATAACAC",7,0.21,NA,NA,NA,NA,NA,NA,"stop","G9* W23R N107D",3
"lib1","SARS-CoV-2","CAACGTTCTTAGCAGC",2,8.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V180E K198Y",2
"lib1","SARS-CoV-2","CAACGTTGGGTGCGGT",1,38.37,6.1,-4.66,1.35,1.5,1.27,0.06,">1 nonsynonymous","E10L V37P C61M D68K F99L",5
"lib1","SARS-CoV-2","CAACTAAAAACATAAC",3,19.97,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","R27C Y93R Y178E E186F",4
"lib1","SARS-CoV-2","CAACTAAAATTACGAG",4,115.23,8.17,-2.59,0.15,2.46,1.08,0.01,">1 nonsynonymous","N120Q C158S N171T",3
"lib1","SARS-CoV-2","CAACTAAACCCGATCT",2,55.59,8.46,-2.3,0.14,2.95,1.02,0.01,">1 nonsynonymous","P7Q N157L T201Q",3
"lib1","SARS-CoV-2","CAACTAAACGTACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95T N120* R127Q T148Y G152E V173I",6
"lib1","SARS-CoV-2","CAACTAAAGCAGGTAT",3,98.64,9.67,-1.09,0.05,2.88,1.04,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","CAACTAAAGCCGCGAG",1,1.67,NA,NA,NA,NA,NA,NA,"stop","L57* Y159N",2
"lib1","SARS-CoV-2","CAACTAAATCCCACTG",2,5.68,6,-4.76,2,3,1.25,0.02,"1 nonsynonymous","A89E",1
"lib1","SARS-CoV-2","CAACTAAATTAATGGT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104D S129H G146R",3
"lib1","SARS-CoV-2","CAACTAAATTTTGCAT",1,58.14,10.81,0.04,0.07,2.89,1.08,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","CAACTAAATTTTTATC",2,71.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D112K K128I I142H K198R",4
"lib1","SARS-CoV-2","CAACTAACACAATAGT",1,15.07,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","L57V K94N G101L N118D",4
"lib1","SARS-CoV-2","CAACTAACATACTCAT",14,323.37,10.87,0.1,0.08,2.91,1.05,0,">1 nonsynonymous","D59S T85K Y175W",3
"lib1","SARS-CoV-2","CAACTAACGAAAAACA",4,120.04,6.95,-3.81,0.22,1.5,1.12,0.01,"1 nonsynonymous","P177V",1
"lib1","SARS-CoV-2","CAACTAACGAACATAG",1,20.31,10.37,-0.39,0.07,2.81,1.15,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","CAACTAACTGATCATT",6,37.67,10.74,-0.02,0.05,2.92,1.07,0,"1 nonsynonymous","S184C",1
"lib1","SARS-CoV-2","CAACTAACTTTGATGA",1,13.54,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R27K I72F G117E S129T",4
"lib1","SARS-CoV-2","CAACTAAGAATTCGCG",6,40.21,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K94I Y165F",2
"lib1","SARS-CoV-2","CAACTAAGAGCCTCCT",4,49.82,6.19,-4.57,0.91,1.5,1.2,0.03,">1 nonsynonymous","L5S Y121F L162D",3
"lib1","SARS-CoV-2","CAACTAAGATGCCTTA",1,15.69,6.2,-4.57,0.95,1.5,1.18,0.04,">1 nonsynonymous","N1R F62T D90V S129L V173T",5
"lib1","SARS-CoV-2","CAACTAAGCAAGTGAG",5,74.58,8.5,-2.27,0.28,1.51,1.18,0.03,">1 nonsynonymous","G86S Y119S",2
"lib1","SARS-CoV-2","CAACTAAGTCTCACGT",5,95.87,9.59,-1.18,0.05,2.88,1.06,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","CAACTAATAAATAATC",10,120.87,10.15,-0.62,0.09,2.5,1.02,0,">1 nonsynonymous","E10K S41E D97Y S164Q",4
"lib1","SARS-CoV-2","CAACTAATCCTCGAAA",5,53.57,9.02,-1.74,0.08,2.83,1.15,0,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","CAACTAATCTCGGGAG",2,27.88,6,-4.76,0.99,1.5,1.12,0.01,">1 nonsynonymous","G9Y F17Q P96Q G116Q",4
"lib1","SARS-CoV-2","CAACTAATTATTACTG",2,45.07,7.49,-3.27,0.28,1.89,1.17,0.02,">1 nonsynonymous","K87C N157Y",2
"lib1","SARS-CoV-2","CAACTACAAACCATTT",5,120.72,10.33,-0.43,0.04,2.81,1.04,0,">1 nonsynonymous","F62M S129W V173A",3
"lib1","SARS-CoV-2","CAACTACATAGACTTT",2,3.27,NA,NA,NA,NA,NA,NA,"stop","C6A S69M T85Y P96K W106* N110M",6
"lib1","SARS-CoV-2","CAACTACCAGAGAAGG",4,3.31,NA,NA,NA,NA,NA,NA,"stop","Y21* T46V",2
"lib1","SARS-CoV-2","CAACTACCATGGAAAG",2,12.64,8.17,-2.6,0.15,2.98,1,0.01,"1 nonsynonymous","F126E",1
"lib1","SARS-CoV-2","CAACTACGAAAACTCA",1,5.63,6.22,-4.54,1.23,3,1.5,0.01,">1 nonsynonymous","C49S D75Y I88M P96D S108N",5
"lib1","SARS-CoV-2","CAACTACGCCATTACG",6,102.77,10.76,-0.01,0.07,2.85,1.09,0,"1 nonsynonymous","S36M",1
"lib1","SARS-CoV-2","CAACTACGCTAGATGT",4,17.21,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","L60S W106G L162R",3
"lib1","SARS-CoV-2","CAACTACTACAAACAA",6,0.96,NA,NA,NA,NA,NA,NA,"stop","N40V T85* N118R",3
"lib1","SARS-CoV-2","CAACTACTATGATAGA",1,14.76,10.64,-0.13,0.06,2.99,1,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","CAACTACTTATTTCTG",11,98.27,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7T N92M",2
"lib1","SARS-CoV-2","CAACTACTTCATAAAT",2,73.2,8.48,-2.28,0.17,1.88,1.06,0.01,">1 nonsynonymous","G9S N24K N58Y Y143H N157S",5
"lib1","SARS-CoV-2","CAACTAGAACATTTAG",7,42.73,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","I72F V103C",2
"lib1","SARS-CoV-2","CAACTAGAAGGCTTCT",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V P54D R78K D97A L162D F185Y A190V",7
"lib1","SARS-CoV-2","CAACTAGAATACCACA",9,82.49,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10V V37L V77A D90R",4
"lib1","SARS-CoV-2","CAACTAGACCTGTAAG",1,17.39,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","V77E W106T T201L",3
"lib1","SARS-CoV-2","CAACTAGACTCGCTTT",2,0.51,NA,NA,NA,NA,NA,NA,"stop","A42S N107* N130R I138R Y178R A190L",6
"lib1","SARS-CoV-2","CAACTAGATAAGCCAA",3,37.82,10.37,-0.4,0.07,2.82,1.07,0,">1 nonsynonymous","S19E V37F",2
"lib1","SARS-CoV-2","CAACTAGATCACGAAT",6,54.41,10.02,-0.74,0.04,2.81,1.02,0,">1 nonsynonymous","G146Q V173L",2
"lib1","SARS-CoV-2","CAACTAGCAACTTATA",2,45.68,10.62,-0.14,0.09,2.84,1.02,0,"1 nonsynonymous","T63W",1
"lib1","SARS-CoV-2","CAACTAGCCCACGAAT",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4M A42F P82R",3
"lib1","SARS-CoV-2","CAACTAGCCTACGAGT",4,57.54,10.39,-0.37,0.03,2.88,1.02,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","CAACTAGCGATTGAGG",2,24.26,10.62,-0.14,0.06,2.88,1.07,0,">1 nonsynonymous","D90E K128P",2
"lib1","SARS-CoV-2","CAACTAGCGTACTTGG",4,24.3,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4F N130D P161T P169L",4
"lib1","SARS-CoV-2","CAACTAGGCTGAAACA",3,27.34,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15N S41W Y165E",3
"lib1","SARS-CoV-2","CAACTAGGTCACATAA",1,17.35,6.14,-4.62,0.33,2.56,1.17,0,">1 nonsynonymous","S41D S69R F99S G117N C150R",5
"lib1","SARS-CoV-2","CAACTAGTAAAAAATT",16,378.49,9.61,-1.16,0.03,2.89,1.06,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","CAACTAGTAACGTTAG",13,172.33,9.78,-0.99,0.12,1.92,1.09,0.01,">1 nonsynonymous","A18Y K56D D90V",3
"lib1","SARS-CoV-2","CAACTAGTCAAACTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F A18V D59T S113A Y119K V180R G196W",7
"lib1","SARS-CoV-2","CAACTAGTGAAGCACT",2,43.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N64P S113R G152H F156S",4
"lib1","SARS-CoV-2","CAACTATAAACACATG",2,1.04,NA,NA,NA,NA,NA,NA,"stop","K56S V71* R78V",3
"lib1","SARS-CoV-2","CAACTATAGAAGAACA",2,15.37,10.52,-0.25,0.21,2.74,1.01,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CAACTATAGCCGGATA",2,51.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D98A V103F N120V",3
"lib1","SARS-CoV-2","CAACTATATTCACTTT",1,7.96,6.36,-4.41,1.06,1.5,1.13,0.07,">1 nonsynonymous","I28M Y93R",2
"lib1","SARS-CoV-2","CAACTATCAAGACAAA",6,44.45,6.73,-4.03,0.5,1.5,1.1,0.04,">1 nonsynonymous","G9R A22W R27P G83V K114S",5
"lib1","SARS-CoV-2","CAACTATCAGAGTTGA",1,15.7,6.32,-4.44,0.5,1.61,1.1,0.02,">1 nonsynonymous","F12T F99Y Y121P",3
"lib1","SARS-CoV-2","CAACTATCAGTTTCTA",3,27.69,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","F8V Y39H N92Y",3
"lib1","SARS-CoV-2","CAACTATCCAATTCGT",8,227.54,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","K48W V153F P177S A190S T201P",5
"lib1","SARS-CoV-2","CAACTATGACGAACCT",3,59.43,6,-4.76,2,1.5,1.21,0.04,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","CAACTATTACTTCGTT",2,39.9,10.29,-0.48,0.08,2.53,1.01,0,">1 nonsynonymous","N13W T148I",2
"lib1","SARS-CoV-2","CAACTCACCCAAAAAA",1,125.65,10.11,-0.65,0.09,2.54,1.01,0,">1 nonsynonymous","I2S F44L Y123V",3
"lib1","SARS-CoV-2","CAACTCACGGTCTTTG",4,42.67,10.06,-0.71,0.08,2.79,1.01,0,">1 nonsynonymous","A14L F160S",2
"lib1","SARS-CoV-2","CAACTCACGTTAGGTA",4,74.1,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D68M P82Q T170S",3
"lib1","SARS-CoV-2","CAACTCAGTAAGCATA",4,49.16,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F12L V103S I138G H189V",4
"lib1","SARS-CoV-2","CAACTCAGTCCGACAC",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73C P82R T85I F126S",4
"lib1","SARS-CoV-2","CAACTCATAGACCGAA",1,32.9,10.13,-0.63,0.09,2.94,1,0,">1 nonsynonymous","T3L G9M K87R",3
"lib1","SARS-CoV-2","CAACTCATCTCAAAAT",9,68.71,6.51,-4.26,0.37,1.5,1.13,0.01,">1 nonsynonymous","A105R Y119L L131S T140I Y165N",5
"lib1","SARS-CoV-2","CAACTCATGGCTTTTT",9,140,9.66,-1.1,0.05,2.8,1.07,0,">1 nonsynonymous","Q84R A145R",2
"lib1","SARS-CoV-2","CAACTCCAACAATCAC",2,36.12,10.49,-0.27,0.07,2.87,1.08,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","CAACTCCCATCTAAGG",5,3.26,NA,NA,NA,NA,NA,NA,"stop","A81F Y93R E141S Y165*",4
"lib1","SARS-CoV-2","CAACTCCCGCTACAAT",4,0.87,NA,NA,NA,NA,NA,NA,"stop","L5* P96R",2
"lib1","SARS-CoV-2","CAACTCCCGGGGACAA",7,54.13,10.43,-0.34,0.05,2.87,1.02,0,">1 nonsynonymous","C61M E141Y",2
"lib1","SARS-CoV-2","CAACTCCTTATCAAAA",5,62.61,10.45,-0.32,0.11,2.52,1.01,0.01,">1 nonsynonymous","A42Y I88V",2
"lib1","SARS-CoV-2","CAACTCGAATTAATTA",1,12.32,10.3,-0.47,0.15,2.69,1,0.01,">1 nonsynonymous","Y50F Y178V",2
"lib1","SARS-CoV-2","CAACTCGATAGCTGCA",2,7.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N30K D112N S200L",3
"lib1","SARS-CoV-2","CAACTCGCAAACAACA",10,51.8,6.23,-4.54,0.64,1.5,1.2,0.02,">1 nonsynonymous","S41Y T63I Y165P P197C",4
"lib1","SARS-CoV-2","CAACTCGCAACCGAAA",7,62.15,9.01,-1.76,0.24,1.5,1.1,0.03,">1 nonsynonymous","G9V A14W G152T",3
"lib1","SARS-CoV-2","CAACTCGCTGGCTCCG",7,119.57,9.84,-0.92,0.1,2.1,1.07,0,">1 nonsynonymous","E10G S36C T55M C61N Q84T E154T",6
"lib1","SARS-CoV-2","CAACTCGGGCTAACCA",5,14.65,10.08,-0.68,0.21,2.27,1,0.01,">1 nonsynonymous","E76S L122T",2
"lib1","SARS-CoV-2","CAACTCGGTAACATAT",1,7.6,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","C49Y D98E F99I E135M",4
"lib1","SARS-CoV-2","CAACTCGGTTTATTTA",6,14.47,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P96Q V103R N118A K128L",4
"lib1","SARS-CoV-2","CAACTCTACAACCTCG",3,54.86,10.54,-0.23,0.05,2.94,1.01,0,">1 nonsynonymous","P54N L188V",2
"lib1","SARS-CoV-2","CAACTCTATTCGAACG",2,2.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11M",1
"lib1","SARS-CoV-2","CAACTCTCAAAACTTA",12,259.21,10.19,-0.57,0.03,2.85,1.02,0,">1 nonsynonymous","G9V L95M",2
"lib1","SARS-CoV-2","CAACTCTCAGAATTGC",3,0.21,NA,NA,NA,NA,NA,NA,"stop","C6A N40E K132L T170H T201*",5
"lib1","SARS-CoV-2","CAACTCTGTTATGCCT",2,7.49,6,-4.76,2,2.61,1.2,0.02,">1 nonsynonymous","Y50N T148F P191V",3
"lib1","SARS-CoV-2","CAACTGACAATTTTAA",5,64.39,10.09,-0.67,0.09,2.43,1.03,0,">1 nonsynonymous","A81D K128S",2
"lib1","SARS-CoV-2","CAACTGACGCGTAAAG",5,60.64,8.23,-2.54,0.19,1.93,1.13,0.01,">1 nonsynonymous","Q144Y C158T",2
"lib1","SARS-CoV-2","CAACTGACTATCAGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","I72S Y93*",2
"lib1","SARS-CoV-2","CAACTGAGGTATAACA",5,69.2,9.99,-0.77,0.09,2.56,1.03,0,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","CAACTGATGCGTCACG",6,111.55,10.76,-0.01,0.07,2.87,1.07,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","CAACTGATTTTTTAAA",5,64.74,10.63,-0.14,0.03,2.9,1.06,0,">1 nonsynonymous","V37R F62T G152S",3
"lib1","SARS-CoV-2","CAACTGCAAGGGTCCA",1,33.97,10.89,0.12,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACTGCATAGCATGC",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F C61G A67T D97S",4
"lib1","SARS-CoV-2","CAACTGCGCTGTAGTG",1,10.29,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","C6D I88K V103G R136P F156V",5
"lib1","SARS-CoV-2","CAACTGCGTAAGTTTC",7,218.88,9.85,-0.92,0.09,2.14,1.06,0,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","CAACTGCTAGCCAGAT",2,29.52,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","G9W Y50P S108Y H189Y",4
"lib1","SARS-CoV-2","CAACTGGAAGCTCGGC",17,258.24,10.54,-0.22,0.03,2.92,1.04,0,">1 nonsynonymous","D90S N130C",2
"lib1","SARS-CoV-2","CAACTGGACAAAATCG",4,46.35,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A14M S53G R73A K87S Y119H S129Y Q176R",7
"lib1","SARS-CoV-2","CAACTGGAGGATTATT",1,2.3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAACTGGCACTAAATT",1,27.89,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","E135S C150L T201Y",3
"lib1","SARS-CoV-2","CAACTGTTTAAGGACG",9,97.35,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I104C Y123D Y175H",3
"lib1","SARS-CoV-2","CAACTTAAAATTGGTG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W F99T T201C",3
"lib1","SARS-CoV-2","CAACTTAACGTCTGAA",2,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27F",1
"lib1","SARS-CoV-2","CAACTTAATACTCACT",1,41.03,6.13,-4.63,0.7,1.5,1.21,0.01,">1 nonsynonymous","N40R V52G P133G S147V K198P",5
"lib1","SARS-CoV-2","CAACTTAATGTGACTC",6,118.58,6.32,-4.44,0.31,1.5,1.15,0.01,">1 nonsynonymous","T63F D97K Y175L S200I",4
"lib1","SARS-CoV-2","CAACTTACAGAAAAGA",4,25.29,10.76,-0.01,0.1,2.73,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACTTAGAGTAACAG",1,20.08,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N107S K128S Q176F",3
"lib1","SARS-CoV-2","CAACTTAGCAATCTAG",5,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F F99H W106A Y121T",4
"lib1","SARS-CoV-2","CAACTTAGCATGAAGG",6,113.23,8.7,-2.06,0.07,2.9,1.07,0,">1 nonsynonymous","Y35G G116S F156T E186N",4
"lib1","SARS-CoV-2","CAACTTAGCATGTTTA",2,21.02,9.95,-0.82,0.08,2.97,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","CAACTTAGTGGGCCAT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","S41* L95H G116A",3
"lib1","SARS-CoV-2","CAACTTAGTTTCATAC",4,23.47,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G9D S36I G86R E141G F160T",5
"lib1","SARS-CoV-2","CAACTTATATAGTAGC",1,9.07,10.8,0.04,0.1,2.99,1,0,"1 nonsynonymous","P197Y",1
"lib1","SARS-CoV-2","CAACTTATGATCAACT",1,40.9,10.62,-0.15,0.13,2.69,1.12,0.01,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","CAACTTATTGCCCGAC",5,61.43,6,-4.76,1.01,1.5,1.19,0.01,">1 nonsynonymous","N40W T46I Y91L K128Y T148G G166R",6
"lib1","SARS-CoV-2","CAACTTATTTAATTTT",4,82.72,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10H W23S V37T I72S W106L P169S",6
"lib1","SARS-CoV-2","CAACTTATTTGCCAGG",3,34.54,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S53A A81P S139Q",3
"lib1","SARS-CoV-2","CAACTTATTTTTTGGT",3,45.56,10.66,-0.11,0.04,2.88,1.06,0,">1 nonsynonymous","N1R N64R",2
"lib1","SARS-CoV-2","CAACTTCAAGATATGG",5,68.93,10.76,0,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACTTCACCTATAAA",2,4.78,NA,NA,NA,NA,NA,NA,"stop","A105N Q144*",2
"lib1","SARS-CoV-2","CAACTTCAGATGCAAA",12,227.73,10.4,-0.37,0.04,2.96,1,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","CAACTTCATTATACGG",2,40.14,6,-4.76,1.08,1.5,1.18,0.02,">1 nonsynonymous","C6S V11D F12V A18F N40T N58Y L122K K128N R136L",9
"lib1","SARS-CoV-2","CAACTTCCCAAACCAG",1,0.88,NA,NA,NA,NA,NA,NA,"stop","C61K A105S Y119* E135P T140P",5
"lib1","SARS-CoV-2","CAACTTCCCAATCATA",1,15.78,10.14,-0.62,0.1,2.94,1.04,0,">1 nonsynonymous","G155V T201R",2
"lib1","SARS-CoV-2","CAACTTCCTATGCTTA",5,58.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H Y50M",2
"lib1","SARS-CoV-2","CAACTTCTACTCCATA",6,86.02,10.28,-0.48,0.07,2.87,1.02,0,">1 nonsynonymous","N30T Y66F",2
"lib1","SARS-CoV-2","CAACTTCTGAAGAATG",2,34.8,10.67,-0.1,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACTTGAACTCACGG",3,23.83,8.8,-1.97,0.23,1.9,1.19,0.02,">1 nonsynonymous","T3H S43L V115C P133S",4
"lib1","SARS-CoV-2","CAACTTGACACATACA",11,0.44,NA,NA,NA,NA,NA,NA,"stop","Y35Q V115*",2
"lib1","SARS-CoV-2","CAACTTGATGCAGCGC",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V K26T A89L K128G A190R",5
"lib1","SARS-CoV-2","CAACTTGATTATTCCG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F I142N V180D",3
"lib1","SARS-CoV-2","CAACTTGCAATTATGA",2,5.4,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","D68W G74F K87S",3
"lib1","SARS-CoV-2","CAACTTGCTGAAAAGT",1,32.41,10.3,-0.47,0.08,2.66,1,0,">1 nonsynonymous","I2E R27L A81M",3
"lib1","SARS-CoV-2","CAACTTGCTGCCGGCA",6,103.38,8.64,-2.13,0.12,2.85,1.11,0,"1 nonsynonymous","S113Q",1
"lib1","SARS-CoV-2","CAACTTGGTACCATAT",4,41.68,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","G101M",1
"lib1","SARS-CoV-2","CAACTTGGTAGAGAGC",1,6.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92H V182A A190S",3
"lib1","SARS-CoV-2","CAACTTGTATGCCTTC",7,102.1,10.74,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAACTTTAACTTCCAT",1,13.76,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L38H T85L G101A G117E",4
"lib1","SARS-CoV-2","CAACTTTCATTGGCCC",2,61.43,10.39,-0.38,0.06,2.93,1,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","CAACTTTCCGACGACA",2,30.82,9.01,-1.75,0.46,1.5,1.07,0.07,">1 nonsynonymous","C6Y R25K F44V C49Q F99P L162F",6
"lib1","SARS-CoV-2","CAACTTTGTTTATTCA",3,15.82,9.81,-0.95,0.32,1.5,1,0.05,">1 nonsynonymous","Y50S K128Y",2
"lib1","SARS-CoV-2","CAACTTTTCGCCCGAG",5,82.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y66E V115C E141T Y159S T201C",5
"lib1","SARS-CoV-2","CAAGAAAAAAAATCGA",3,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q S41L C49G",3
"lib1","SARS-CoV-2","CAAGAAAAACCCCTAA",2,75.73,10.16,-0.61,0.07,2.83,1.01,0,"1 nonsynonymous","C6Q",1
"lib1","SARS-CoV-2","CAAGAAAAACCCTTAG",7,50.93,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A81N W106P S139L",3
"lib1","SARS-CoV-2","CAAGAAAAAGACGCGG",8,33.96,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8G F17M K48N Y66G E141N",5
"lib1","SARS-CoV-2","CAAGAAAAAGTTCTTA",6,52.76,8.06,-2.7,0.26,1.58,1.11,0.03,">1 nonsynonymous","A33K G146M",2
"lib1","SARS-CoV-2","CAAGAAAAATTATGCT",11,231.41,10.76,0,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAAAACTCGAATA",3,38.08,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V77R D90I Q176R",3
"lib1","SARS-CoV-2","CAAGAAAATCACTCCA",1,7.41,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6I Y91R",2
"lib1","SARS-CoV-2","CAAGAAAATCTAGTGT",6,98.29,8.19,-2.57,0.22,1.78,1.14,0.02,">1 nonsynonymous","C6D R27L P54D A145I",4
"lib1","SARS-CoV-2","CAAGAAAATTTTATAT",3,29.55,6.04,-4.72,1.04,1.5,1.17,0.03,">1 nonsynonymous","N13H S19V V32R",3
"lib1","SARS-CoV-2","CAAGAAACAAACCTAA",1,46.09,6.01,-4.75,1.19,1.5,1.21,0.03,">1 nonsynonymous","S43G S69G D75W F134N",4
"lib1","SARS-CoV-2","CAAGAAACAACCAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42I K94*",2
"lib1","SARS-CoV-2","CAAGAAACGACTTAAA",1,2.39,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAAACTATGAATA",2,9.23,6.56,-4.2,0.81,2.02,1.15,0.02,">1 nonsynonymous","F8N F17Y Y66T V103T E141K",5
"lib1","SARS-CoV-2","CAAGAAAGAAATCCAA",3,28.66,6.77,-3.99,0.33,1.5,1.12,0.01,">1 nonsynonymous","G9V I138M P149K N157C",4
"lib1","SARS-CoV-2","CAAGAAAGCATCAGAC",2,21.25,10.44,-0.33,0.06,2.95,1.06,0,">1 nonsynonymous","G83R G174A",2
"lib1","SARS-CoV-2","CAAGAAAGCTGATAAC",2,14.2,7.3,-3.47,0.47,1.5,1.19,0.05,">1 nonsynonymous","C6K A22N V65L G166R",4
"lib1","SARS-CoV-2","CAAGAAAGGCAATACT",6,64.85,10.14,-0.63,0.08,2.33,1.02,0,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","CAAGAAATAAGGAATG",12,97.35,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5R S36V Y50S T55K A81N E154V P169F",7
"lib1","SARS-CoV-2","CAAGAAATGAAGACCT",1,39.46,8.4,-2.36,0.16,2.01,1.07,0.01,">1 nonsynonymous","T3K K87E Y121N",3
"lib1","SARS-CoV-2","CAAGAAATGTTAATTA",13,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48W V52S C102L S129K T148S",5
"lib1","SARS-CoV-2","CAAGAAATGTTAATTG",2,49.21,10.21,-0.56,0.08,2.71,1.04,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","CAAGAACAAGATTATG",1,15.26,9.53,-1.23,0.19,2.24,1,0.02,">1 nonsynonymous","A14C V37C D98S",3
"lib1","SARS-CoV-2","CAAGAACAGCAGACCA",13,139.48,10.69,-0.08,0.08,2.82,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAACATAAAGCCA",1,26.16,10.08,-0.68,0.09,2.72,1.02,0,">1 nonsynonymous","F8L G83F K114A L131I L183F",5
"lib1","SARS-CoV-2","CAAGAACATGAGATGT",3,8.2,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","A42W G86P V182S",3
"lib1","SARS-CoV-2","CAAGAACATTCGAAAA",6,82.41,10.77,0,0.11,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAACATTTCCAAA",5,106.27,8.45,-2.32,0.18,2.62,1.07,0.01,">1 nonsynonymous","L5T N120W Q168K",3
"lib1","SARS-CoV-2","CAAGAACCAATTTGGC",5,1.42,NA,NA,NA,NA,NA,NA,"stop","N13* N24E R78L Q84*",4
"lib1","SARS-CoV-2","CAAGAACCCGTAATGT",6,66.46,6.11,-4.66,0.73,1.5,1.15,0.02,">1 nonsynonymous","I2L E10H F167T A190E P197K",5
"lib1","SARS-CoV-2","CAAGAACCTAGGACTA",2,2.19,NA,NA,NA,NA,NA,NA,"stop","I28M S36L A42R T85G Y93* Y175F",6
"lib1","SARS-CoV-2","CAAGAACCTCAATGTT",5,71.08,10.8,0.03,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAACGAGAACTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R16V T55C L122K S129* E141C",5
"lib1","SARS-CoV-2","CAAGAACGGTGTTAAG",1,44.33,10.73,-0.03,0.07,2.93,1.05,0,">1 nonsynonymous","Y39Q L131V",2
"lib1","SARS-CoV-2","CAAGAACTATGCACCA",4,95.33,8.63,-2.14,0.11,2.79,1.07,0.01,">1 nonsynonymous","Y35T G166M",2
"lib1","SARS-CoV-2","CAAGAACTTAGCACTT",5,187.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R78L Y119S Q176T",3
"lib1","SARS-CoV-2","CAAGAAGAGTTTTGCA",4,21.22,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y50H D90L N118L F134C Q168E Y178A S200L",7
"lib1","SARS-CoV-2","CAAGAAGATATTCTCC",4,61.34,10.27,-0.5,0.07,2.82,1.03,0,">1 nonsynonymous","G9C S41L K198R",3
"lib1","SARS-CoV-2","CAAGAAGATTCACTAG",1,12.17,9.3,-1.46,0.11,1.93,1.15,0.01,"1 nonsynonymous","Y121E",1
"lib1","SARS-CoV-2","CAAGAAGCCAGACCAA",14,112.57,10.05,-0.72,0.07,2.57,1,0,">1 nonsynonymous","T3C R27T Y35S S147A",4
"lib1","SARS-CoV-2","CAAGAAGGATCATGCA",2,12.81,8.41,-2.35,0.41,1.5,1.01,0.06,">1 nonsynonymous","S53F N120Y K132F F185V",4
"lib1","SARS-CoV-2","CAAGAAGGCTTCATCC",7,94.89,10.71,-0.06,0.07,2.9,1.05,0,"1 nonsynonymous","N151L",1
"lib1","SARS-CoV-2","CAAGAATAGCAAATCT",1,31.2,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A14Q S43T A67N R73C D98S Y119E Q144F",7
"lib1","SARS-CoV-2","CAAGAATATAGCCCTT",8,0.73,NA,NA,NA,NA,NA,NA,"stop","A14* T55K Y143L S164I",4
"lib1","SARS-CoV-2","CAAGAATATCTAAAGG",6,56.65,10.69,-0.08,0.08,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGAATCAATAGGAC",3,1.95,NA,NA,NA,NA,NA,NA,"stop","L5V Y121* S184Q",3
"lib1","SARS-CoV-2","CAAGAATCTACACATA",6,55.14,6.14,-4.63,0.7,1.5,1.16,0.02,">1 nonsynonymous","L38H N58W N107S Y121S V182W",5
"lib1","SARS-CoV-2","CAAGAATGGAATAATA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65K Y121P R127M T170Y",4
"lib1","SARS-CoV-2","CAAGAATGTTATGACA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K S53C D68N Q84K P169V T201W",6
"lib1","SARS-CoV-2","CAAGAATTTAATCCGC",1,2.52,NA,NA,NA,NA,NA,NA,"stop","G51* Y121N I142K",3
"lib1","SARS-CoV-2","CAAGAATTTAGTACGC",11,116.37,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F62L L122V R179G",3
"lib1","SARS-CoV-2","CAAGACAACACGGACA",3,85.49,9.18,-1.58,0.13,1.66,1.17,0.01,">1 nonsynonymous","I2Q L95F",2
"lib1","SARS-CoV-2","CAAGACAACATAATAA",2,121.3,10.04,-0.72,0.09,2.6,1.03,0,">1 nonsynonymous","N1L R27G",2
"lib1","SARS-CoV-2","CAAGACAAGATAATAG",4,67.93,10.65,-0.12,0.04,2.96,1,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","CAAGACAATGTAGAAA",5,28.58,6,-4.76,1.56,1.5,1.09,0,">1 nonsynonymous","N130E E135G F156P V180Y",4
"lib1","SARS-CoV-2","CAAGACAATTAACTTT",1,31.04,10.8,0.04,0.04,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGACACGATAAACA",2,16.31,10.7,-0.07,0.07,2.83,1.11,0,">1 nonsynonymous","F62V T100A L122T",3
"lib1","SARS-CoV-2","CAAGACACTAGGTGAG",6,97.69,10.08,-0.68,0.05,2.97,1,0,">1 nonsynonymous","R27A E154I",2
"lib1","SARS-CoV-2","CAAGACAGAGCTTGTT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","K87* T100L S139F H189N",4
"lib1","SARS-CoV-2","CAAGACAGGCTGGCGA",2,46.87,8.65,-2.11,0.22,1.73,1.07,0.02,">1 nonsynonymous","S43N V103A K132E",3
"lib1","SARS-CoV-2","CAAGACAGGGCAAGCG",3,19.98,8.57,-2.19,0.26,1.96,1.05,0.03,"1 nonsynonymous","R179T",1
"lib1","SARS-CoV-2","CAAGACAGTTGGCTGT",10,81.21,6,-4.76,2,1.5,1.24,0.01,"1 nonsynonymous","Y178P",1
"lib1","SARS-CoV-2","CAAGACATAACAAATT",9,64.72,9.48,-1.29,0.14,1.87,1.11,0.01,">1 nonsynonymous","G9A N13L L57Q",3
"lib1","SARS-CoV-2","CAAGACATCTTACTTG",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G V37Y S43L L60P D68I D75P",6
"lib1","SARS-CoV-2","CAAGACATGAATATTG",1,21.7,6.49,-4.27,0.25,2.28,1.21,0.01,">1 nonsynonymous","I28F C49V N107V S200Y",4
"lib1","SARS-CoV-2","CAAGACATTAATCGTT",2,29.89,9.85,-0.92,0.13,1.85,1.05,0.01,">1 nonsynonymous","P7L Y91L D98P",3
"lib1","SARS-CoV-2","CAAGACCAAAAACTTA",2,24.13,10.29,-0.48,0.08,2.99,1,0,"1 nonsynonymous","F185I",1
"lib1","SARS-CoV-2","CAAGACCAATAACATA",2,49.46,8.74,-2.03,0.09,2.83,1.12,0,">1 nonsynonymous","K48Y F126Y",2
"lib1","SARS-CoV-2","CAAGACCATCAAGAAA",4,28.49,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","E10R D59L V103M",3
"lib1","SARS-CoV-2","CAAGACCCACAAGAGC",1,0.44,NA,NA,NA,NA,NA,NA,"stop","P82I L122* S129G R136N",4
"lib1","SARS-CoV-2","CAAGACCCATCAAATT",5,25.37,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","CAAGACCCATGGGGAC",6,66.88,9.97,-0.79,0.12,2.25,1.02,0.01,">1 nonsynonymous","V65F Q84T P96S",3
"lib1","SARS-CoV-2","CAAGACCCTTATCAAA",1,61.82,10.81,0.04,0.08,2.89,1.04,0,"1 nonsynonymous","N120D",1
"lib1","SARS-CoV-2","CAAGACCTTCATTGGC",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G D98L C102R T148A",4
"lib1","SARS-CoV-2","CAAGACGAATGTCCTA",5,35.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82K F99V Q144I",3
"lib1","SARS-CoV-2","CAAGACGACAGATATG",4,40.47,10.45,-0.32,0.27,2.55,1.1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CAAGACGAGTAAAAGC",3,29.71,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A33L G86A N120C D137I",4
"lib1","SARS-CoV-2","CAAGACGCCTAAGAGG",9,3.67,NA,NA,NA,NA,NA,NA,"stop","G101* S113V R124V E135Y",4
"lib1","SARS-CoV-2","CAAGACGCGTTCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C R27L N118L L125H",4
"lib1","SARS-CoV-2","CAAGACGGCCCCACAA",2,29.29,8.3,-2.47,0.2,2.23,1.14,0.01,">1 nonsynonymous","R73K D90M Y159L S200R",4
"lib1","SARS-CoV-2","CAAGACGTAACATGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* V20K F62N Y123E C150D",5
"lib1","SARS-CoV-2","CAAGACGTAAGATAAG",6,2.98,NA,NA,NA,NA,NA,NA,"stop","C61* Q168L",2
"lib1","SARS-CoV-2","CAAGACGTGCACACAT",5,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I F99R V103L",3
"lib1","SARS-CoV-2","CAAGACTAGAAAGAAA",1,33.36,10.26,-0.51,0.04,2.89,1.03,0,"1 nonsynonymous","G152V",1
"lib1","SARS-CoV-2","CAAGACTAGCGATGGC",1,23.07,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V11L N107A Y119S F134G N151F F160R V182L",7
"lib1","SARS-CoV-2","CAAGACTAGCTACCTA",5,67.1,7.9,-2.87,0.22,1.5,1.19,0.01,"1 nonsynonymous","N157I",1
"lib1","SARS-CoV-2","CAAGACTATACTAAAA",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30C V37M N64R",3
"lib1","SARS-CoV-2","CAAGACTCACAAAGCA",7,106.05,9.7,-1.06,0.11,2.66,1.09,0,">1 nonsynonymous","L60T I142L P169L",3
"lib1","SARS-CoV-2","CAAGACTCGGGAAAGT",2,13.23,6,-4.76,1.53,1.5,1.18,0.05,"1 nonsynonymous","F99A",1
"lib1","SARS-CoV-2","CAAGACTTAGTGAAAT",12,1.02,NA,NA,NA,NA,NA,NA,"stop","Y66R L122T G174*",3
"lib1","SARS-CoV-2","CAAGACTTATCTTGCA",9,57.87,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","N13P W106T N118F K128R D137C Q168M Y178E",7
"lib1","SARS-CoV-2","CAAGAGAAACTACCAA",2,6.85,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","C6K N13P F126I",3
"lib1","SARS-CoV-2","CAAGAGAAAGCTGAGA",5,22.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6T S41N C61R D98T G117Q Y165P",6
"lib1","SARS-CoV-2","CAAGAGAACATGGAGC",2,29.44,10.74,-0.02,0.07,2.91,1.05,0,">1 nonsynonymous","N120S P197C",2
"lib1","SARS-CoV-2","CAAGAGAACCCCCCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N58I F156*",2
"lib1","SARS-CoV-2","CAAGAGAAGAAACTCG",4,3.52,NA,NA,NA,NA,NA,NA,"stop","Y39* G116I K128I",3
"lib1","SARS-CoV-2","CAAGAGACAATATGAG",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W A89R E154L",3
"lib1","SARS-CoV-2","CAAGAGACAGCTCCTA",2,53.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W106M Y159S",2
"lib1","SARS-CoV-2","CAAGAGACCATACATC",10,98.5,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T55I G86L Y93H L122S K132L E141R",6
"lib1","SARS-CoV-2","CAAGAGACGTAGATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R V52R N64G",3
"lib1","SARS-CoV-2","CAAGAGATAGATTCAA",1,12.03,8.37,-2.39,0.36,1.82,1.08,0.07,">1 nonsynonymous","F62K K87M Q168K",3
"lib1","SARS-CoV-2","CAAGAGATAGCATCAA",1,72.78,10.99,0.22,0.09,2.89,1.05,0,"1 nonsynonymous","N171F",1
"lib1","SARS-CoV-2","CAAGAGATGTGTAATG",5,16.65,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1L V37D K56H G83E N107K G174R",6
"lib1","SARS-CoV-2","CAAGAGATTAGAATAA",9,176.25,10.71,-0.05,0.04,2.85,1.09,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","CAAGAGATTTTTACGC",4,23.91,6,-4.76,0.41,3,1.14,0,">1 nonsynonymous","I142A P161R L183I",3
"lib1","SARS-CoV-2","CAAGAGCACCAAAATG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N13K Q79* P82Y",3
"lib1","SARS-CoV-2","CAAGAGCAGATCAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R25* S36N K94H T140R Y178F",5
"lib1","SARS-CoV-2","CAAGAGCAGGATTCCA",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y P96Q R127C",3
"lib1","SARS-CoV-2","CAAGAGCCCTGACAAT",1,15.06,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5E F12E G116A P149F Q168A K198Q",6
"lib1","SARS-CoV-2","CAAGAGCTAAAGACCG",4,113.18,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","K56L V77R G86W D98N Q176N",5
"lib1","SARS-CoV-2","CAAGAGCTCCAATAGA",3,58.62,9.78,-0.98,0.08,2.32,1.09,0,">1 nonsynonymous","C31W H189Y K198L",3
"lib1","SARS-CoV-2","CAAGAGCTCGCGTACT",3,15.26,6.1,-4.66,1.29,1.5,1.27,0.04,">1 nonsynonymous","V11R C49Y N64Y D97N G146H C150M",6
"lib1","SARS-CoV-2","CAAGAGCTGCTGTTTA",1,8.66,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A89L G155N",2
"lib1","SARS-CoV-2","CAAGAGCTTGTGGTAC",1,14.85,9.76,-1.01,0.14,1.99,1.1,0.01,">1 nonsynonymous","N1E G9T Y121W S200R",4
"lib1","SARS-CoV-2","CAAGAGGAAATCCCTC",1,10.18,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","N107Y P149I",2
"lib1","SARS-CoV-2","CAAGAGGAAGGTAAAA",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21F S45Y Y50L T55Y A190P",5
"lib1","SARS-CoV-2","CAAGAGGCCTAAGTTG",6,0.82,NA,NA,NA,NA,NA,NA,"stop","A190*",1
"lib1","SARS-CoV-2","CAAGAGGGCATGCTGT",2,44.54,10.66,-0.1,0.03,2.95,1.03,0,">1 nonsynonymous","V115H L188V",2
"lib1","SARS-CoV-2","CAAGAGTCCACATATA",1,9.25,9.82,-0.94,0.26,1.98,1,0.02,">1 nonsynonymous","V52C T100W S139V",3
"lib1","SARS-CoV-2","CAAGAGTGACTTCATA",4,18.1,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F99P N120G",2
"lib1","SARS-CoV-2","CAAGAGTGCGCCAATC",1,11.29,9.51,-1.25,0.24,1.96,1.02,0.03,">1 nonsynonymous","C6G S41H V52Y P149N",4
"lib1","SARS-CoV-2","CAAGAGTTTAATCTAA",1,16.48,9.31,-1.46,0.11,2.81,1.09,0,">1 nonsynonymous","V37R G74R",2
"lib1","SARS-CoV-2","CAAGATAAAAAAGTAT",7,26.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94D T100L N157L R179L",4
"lib1","SARS-CoV-2","CAAGATAAAAACAGCA",1,26.99,10.7,-0.07,0.12,2.85,1.1,0.01,"1 nonsynonymous","S29A",1
"lib1","SARS-CoV-2","CAAGATAAAGGACAAT",3,62.54,10.15,-0.62,0.1,2.29,1.1,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","CAAGATAACAAACACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","CAAGATAAGCAGTAAA",4,24.23,6.45,-4.31,0.71,1.5,1.19,0.05,">1 nonsynonymous","Y123D N130L",2
"lib1","SARS-CoV-2","CAAGATAAGTCAAATA",5,55.22,9.08,-1.69,0.08,1.81,1.15,0,">1 nonsynonymous","Y35C S43T R127K",3
"lib1","SARS-CoV-2","CAAGATAATTCGAAAG",9,93.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6T T100G N157T",3
"lib1","SARS-CoV-2","CAAGATACACACTCCT",4,26.57,6.02,-4.74,0.99,1.5,1.12,0.01,">1 nonsynonymous","I72N V153T F167K",3
"lib1","SARS-CoV-2","CAAGATACATATAGTC",3,344.67,7.01,-3.75,0.26,1.5,1.11,0.01,">1 nonsynonymous","T3N A14C S113V",3
"lib1","SARS-CoV-2","CAAGATACGTGTATTG",4,76.85,9.47,-1.29,0.1,2.66,1.11,0,">1 nonsynonymous","F99L N120V F156P P197L",4
"lib1","SARS-CoV-2","CAAGATACTACTATAA",8,43.62,6,-4.76,0.96,1.5,1.14,0.02,">1 nonsynonymous","G9T Y66V N107R V181E",4
"lib1","SARS-CoV-2","CAAGATAGAAAACGTA",3,18.47,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86V V103M D112W L162W",4
"lib1","SARS-CoV-2","CAAGATAGTCAACCCA",2,5.72,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V65K D98P W106R",3
"lib1","SARS-CoV-2","CAAGATATAAATGTAA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P L95F F160N",3
"lib1","SARS-CoV-2","CAAGATATACTTAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","G83T S113L Q176*",3
"lib1","SARS-CoV-2","CAAGATATATCCTACG",4,15.95,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N4L I80L F99Y",3
"lib1","SARS-CoV-2","CAAGATATATTTGAGA",5,23.65,6.09,-4.67,0.21,2.72,1.09,0,">1 nonsynonymous","F17W S41I N151L F167S",4
"lib1","SARS-CoV-2","CAAGATATGGAAACTG",5,79.16,9.15,-1.61,0.17,1.78,1.11,0.01,">1 nonsynonymous","V77F N151R",2
"lib1","SARS-CoV-2","CAAGATATTCTTATAG",1,18.55,6,-4.76,1.79,1.5,1.08,0.02,">1 nonsynonymous","V37Y R73W D90S",3
"lib1","SARS-CoV-2","CAAGATCAAATTTCGA",1,0.34,NA,NA,NA,NA,NA,NA,"stop","N40A G146*",2
"lib1","SARS-CoV-2","CAAGATCACATTTAAC",3,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S Q168S",2
"lib1","SARS-CoV-2","CAAGATCAGCGAAGCT",1,13.89,8.61,-2.15,0.22,1.5,1,0.02,">1 nonsynonymous","N58Y G83I T100Y",3
"lib1","SARS-CoV-2","CAAGATCCAAGCCTAT",3,39.22,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A18L C102I Y121D T140L K198E",5
"lib1","SARS-CoV-2","CAAGATCCAATCTTCC",8,41.82,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1S K56Y R127P",3
"lib1","SARS-CoV-2","CAAGATCTACTGTTTG",6,46.97,9.68,-1.08,0.14,1.81,1.07,0.01,">1 nonsynonymous","S36Y K94S",2
"lib1","SARS-CoV-2","CAAGATCTAGAACGGT",2,3.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44D",1
"lib1","SARS-CoV-2","CAAGATCTTATGTACA",6,93.2,6,-4.76,1.49,1.5,1.18,0.01,">1 nonsynonymous","R27Y D59L D68H A105M R127I",5
"lib1","SARS-CoV-2","CAAGATCTTCACATAA",4,1.76,NA,NA,NA,NA,NA,NA,"stop","N30G L38M E76K I104* L122C V173L",6
"lib1","SARS-CoV-2","CAAGATGAACCATTAG",1,40.5,10.08,-0.69,0.09,2.65,1.03,0,">1 nonsynonymous","L5P E10L D90L P149Q",4
"lib1","SARS-CoV-2","CAAGATGAGGTGACGT",4,9.73,10.76,-0.01,0.08,2.99,1.03,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","CAAGATGATCTCAAAT",1,51.55,9.96,-0.8,0.09,2.21,1.05,0,">1 nonsynonymous","C6Q T85I V153R",3
"lib1","SARS-CoV-2","CAAGATGATTTGACTA",2,6.67,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C31V F44Y P96R A105P G174S K199M",6
"lib1","SARS-CoV-2","CAAGATGCAATGCTCT",1,2.37,NA,NA,NA,NA,NA,NA,"stop","R27* V115R I142Y",3
"lib1","SARS-CoV-2","CAAGATGCTAACAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9E N40D L131D S139*",4
"lib1","SARS-CoV-2","CAAGATGCTTGTGGCA",8,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8E K87N K94C A105T I142L G172V",6
"lib1","SARS-CoV-2","CAAGATGGAGAACAAT",3,15.62,10.64,-0.12,0.19,2.59,1.17,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CAAGATGGCACTATAA",10,221.39,8.96,-1.81,0.08,2.85,1.12,0,">1 nonsynonymous","C61D G166R",2
"lib1","SARS-CoV-2","CAAGATGGGCTCTTTC",3,2.43,NA,NA,NA,NA,NA,NA,"stop","Y91F V103*",2
"lib1","SARS-CoV-2","CAAGATGGTGAAAATA",8,168.36,10.79,0.03,0.06,2.87,1.08,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","CAAGATGTATAGTACC",7,29.26,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N1M A14S F44V N92V S139N Y165L",6
"lib1","SARS-CoV-2","CAAGATGTCTGTACGT",1,37.53,10.77,0.01,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGATTCAAAACAAT",5,75.95,8.41,-2.36,0.19,1.62,1.16,0.01,">1 nonsynonymous","K56Q N64A G74V D97E",4
"lib1","SARS-CoV-2","CAAGATTCAATCTGCG",2,32.93,10.44,-0.33,0.05,2.8,1.09,0,">1 nonsynonymous","D90L L122K N151A S164C",4
"lib1","SARS-CoV-2","CAAGATTCCGAGGACC",2,33.6,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","L5M A42M T100S N107I Y175D",5
"lib1","SARS-CoV-2","CAAGATTGAACAGGAT",1,53.5,9.67,-1.09,0.08,2.83,1.09,0,">1 nonsynonymous","N4A T85N Y119H Q168R",4
"lib1","SARS-CoV-2","CAAGATTGGGTTAATT",5,37.73,9.99,-0.77,0.11,2.21,1.07,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","CAAGATTTATCAATAC",3,39.95,8.39,-2.37,0.13,1.98,1.09,0.01,">1 nonsynonymous","G146L A190N",2
"lib1","SARS-CoV-2","CAAGCAAAAAAATACA",2,103.64,9.07,-1.7,0.28,1.5,1,0.03,">1 nonsynonymous","Y39W Y50K",2
"lib1","SARS-CoV-2","CAAGCAAAAACAAACA",5,67.71,10.75,-0.01,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCAAAACGTATAC",1,0.68,NA,NA,NA,NA,NA,NA,"stop","I2N F12H R136*",3
"lib1","SARS-CoV-2","CAAGCAAAATATCTGC",4,33.79,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V52H T85R Q144L P161Y",4
"lib1","SARS-CoV-2","CAAGCAAATTCGGGCA",3,0.82,NA,NA,NA,NA,NA,NA,"stop","F8H L60*",2
"lib1","SARS-CoV-2","CAAGCAACATGTTTTA",2,12.56,9.66,-1.1,0.09,2.7,1.09,0.01,">1 nonsynonymous","D90N N118S E154V",3
"lib1","SARS-CoV-2","CAAGCAAGGCAAAATG",5,102.46,8.6,-2.17,0.12,2.54,1.07,0.01,">1 nonsynonymous","K128T Y143M V153Q N171G K198G",5
"lib1","SARS-CoV-2","CAAGCAATCAGTGGAT",1,11.4,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","N58L F167G",2
"lib1","SARS-CoV-2","CAAGCAATTATATACT",6,0.66,NA,NA,NA,NA,NA,NA,"stop","P7* S41R P96R A105C Y143* L162I K198M",7
"lib1","SARS-CoV-2","CAAGCAATTTATATCG",1,5.76,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","S69L N107D L125K I142L G172W S200T",6
"lib1","SARS-CoV-2","CAAGCACATTAGCAAG",1,24.65,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5S K48Y P54N C102L Y159L T201P",6
"lib1","SARS-CoV-2","CAAGCACCTACTCGAC",5,174.66,10.75,-0.01,0.09,2.82,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCACGATGTAATC",1,25.68,6.99,-3.77,0.5,1.5,1.13,0.06,">1 nonsynonymous","V71L Y93A",2
"lib1","SARS-CoV-2","CAAGCACTAGATTTCG",12,149.07,8.4,-2.36,0.09,2.85,1.08,0,">1 nonsynonymous","S36D N157W",2
"lib1","SARS-CoV-2","CAAGCAGAAAAATAAA",6,88.67,10.75,-0.02,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCAGAACACTGCA",1,26.8,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y21L T100D Y159Q",3
"lib1","SARS-CoV-2","CAAGCAGATATGTCTG",2,37.24,10.87,0.1,0.07,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCAGCATCAATCC",4,21.32,6,-4.76,2,1.5,1.4,0.05,">1 nonsynonymous","C6A Y35W G86K P96R E135K",5
"lib1","SARS-CoV-2","CAAGCAGGATCAGAAC",1,66.52,10.2,-0.56,0.06,2.74,1.01,0,">1 nonsynonymous","A42K A67S",2
"lib1","SARS-CoV-2","CAAGCAGGCGCTTTAA",3,58.21,9.55,-1.21,0.07,2.81,1.11,0,">1 nonsynonymous","C61V K87D",2
"lib1","SARS-CoV-2","CAAGCAGTACACGTAA",9,156.55,8.73,-2.03,0.14,1.5,1.09,0.01,">1 nonsynonymous","F12R F62V K114T G146A",4
"lib1","SARS-CoV-2","CAAGCAGTGACGTCAC",6,110.21,10.74,-0.03,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCATAATCCACAA",3,11.6,6.42,-4.35,0.53,1.5,1.11,0.02,">1 nonsynonymous","I2V Y35S L57R R78L D98S E141W T201K",7
"lib1","SARS-CoV-2","CAAGCATACACATCCA",3,24.52,10.67,-0.09,0.09,2.91,1.06,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","CAAGCATAGCATATAA",1,24.16,9.31,-1.45,0.15,2.29,1.09,0.01,"1 nonsynonymous","K94S",1
"lib1","SARS-CoV-2","CAAGCATCTAAAACAT",2,10.82,10.6,-0.16,0.13,2.88,1,0.01,"1 nonsynonymous","A22G",1
"lib1","SARS-CoV-2","CAAGCATGGCCGTGAC",2,26.07,7.19,-3.57,0.5,1.5,1.07,0.05,">1 nonsynonymous","I2T D68L L95R F134K F156S",5
"lib1","SARS-CoV-2","CAAGCATTATCAAAGG",1,32.19,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","V37C G117S Q176A C195W",4
"lib1","SARS-CoV-2","CAAGCATTTTCGGTCC",3,48.61,6,-4.76,0.96,1.5,1.15,0.01,">1 nonsynonymous","V11R C31F R127I",3
"lib1","SARS-CoV-2","CAAGCCAAATCGACGG",5,108.78,8.89,-1.87,0.07,2.76,1.15,0,"1 nonsynonymous","Y143E",1
"lib1","SARS-CoV-2","CAAGCCAAATTCAAAT",1,12.9,9.57,-1.19,0.09,2.86,1.09,0,">1 nonsynonymous","Q168V T201K",2
"lib1","SARS-CoV-2","CAAGCCAATAGACCGT",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T193Y V194G",2
"lib1","SARS-CoV-2","CAAGCCACGATAAAGT",13,85.43,10.84,0.08,0.08,2.92,1.04,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","CAAGCCACTTCTTAGC",1,21.68,10.64,-0.12,0.1,2.95,1,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","CAAGCCATAATTTAAA",1,15.26,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y35R D90P",2
"lib1","SARS-CoV-2","CAAGCCATTACTCCCG",1,69.08,10.49,-0.27,0.07,2.93,1.01,0,">1 nonsynonymous","N24Y T201S",2
"lib1","SARS-CoV-2","CAAGCCCACAACACTA",1,32.04,10.37,-0.4,0.06,2.93,1,0,"1 nonsynonymous","I104T",1
"lib1","SARS-CoV-2","CAAGCCCATTGAGGTT",7,58.6,6,-4.76,1.15,1.5,1.17,0.02,">1 nonsynonymous","N40S R73L G83I E154F",4
"lib1","SARS-CoV-2","CAAGCCCCATAAATAC",4,27,8.62,-2.14,0.17,1.5,1.07,0.01,">1 nonsynonymous","F12N R16S F160C",3
"lib1","SARS-CoV-2","CAAGCCCCGCAGCGAG",5,49.08,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","S19T T63E G101L N171K",4
"lib1","SARS-CoV-2","CAAGCCCCGTCCGCAA",8,89.94,7.52,-3.24,0.18,1.5,1.1,0.01,">1 nonsynonymous","K132W A145R S164W",3
"lib1","SARS-CoV-2","CAAGCCCCTCATATAA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","C61W G86C I104M R127*",4
"lib1","SARS-CoV-2","CAAGCCCGACGATTTG",1,9.37,6.71,-4.05,0.99,1.5,1.18,0.05,">1 nonsynonymous","L5P T46S G83V I88M P169T",5
"lib1","SARS-CoV-2","CAAGCCCGCTACTCAC",1,45.78,10.78,0.02,0.06,2.98,1.03,0,"1 nonsynonymous","T55H",1
"lib1","SARS-CoV-2","CAAGCCGAACGTCTCC",5,69.71,10.8,0.04,0.07,2.91,1.03,0,">1 nonsynonymous","G9D Y21F I138V",3
"lib1","SARS-CoV-2","CAAGCCGAAGTACACA",6,39.9,10.8,0.03,0.06,2.94,1.02,0,"1 nonsynonymous","V37P",1
"lib1","SARS-CoV-2","CAAGCCGATAAGATCT",2,21.12,6,-4.76,1.47,3,1.1,0.01,">1 nonsynonymous","I88V F99I F134L Q168M",4
"lib1","SARS-CoV-2","CAAGCCGATAAGTGAA",7,54,7.05,-3.72,0.36,1.5,1.19,0.03,">1 nonsynonymous","A14K D59A S69R K114R",4
"lib1","SARS-CoV-2","CAAGCCGCCTTAAGAG",6,38.21,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19I S113V L125Y S184L",4
"lib1","SARS-CoV-2","CAAGCCGCGTCAACCT",6,45.64,9.31,-1.46,0.21,1.53,1.27,0.02,">1 nonsynonymous","V37I I104A F185H",3
"lib1","SARS-CoV-2","CAAGCCGGAATGATAA",2,0.85,NA,NA,NA,NA,NA,NA,"stop","V77* T100H F167S V181N",4
"lib1","SARS-CoV-2","CAAGCCGTCTTAAAGT",1,68.97,9.36,-1.41,0.14,1.86,1.08,0.01,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","CAAGCCTGAACTTCCC",3,90.21,10.82,0.06,0.08,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCCTTCAAGTCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44L P133* F160N",3
"lib1","SARS-CoV-2","CAAGCGAAACAGTCAC",14,114.28,6.06,-4.7,0.88,1.5,1.22,0.02,">1 nonsynonymous","N1S C61L V77R I88L",4
"lib1","SARS-CoV-2","CAAGCGAAAGAGTCTA",3,21.83,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D90Y V103M N107V R136L G155I",5
"lib1","SARS-CoV-2","CAAGCGAAATATTGAG",1,22.33,8.71,-2.05,0.16,2.81,1.13,0.01,"1 nonsynonymous","I142G",1
"lib1","SARS-CoV-2","CAAGCGAACATAGGGC",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112W N157V",2
"lib1","SARS-CoV-2","CAAGCGAATTCATACA",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92G F99H",2
"lib1","SARS-CoV-2","CAAGCGATGAGCCCCA",13,198.24,10.69,-0.07,0.05,2.91,1.05,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","CAAGCGATTAAGAGAA",8,27.77,8.6,-2.16,0.22,1.5,1.03,0.03,">1 nonsynonymous","N13C S139N P149F",3
"lib1","SARS-CoV-2","CAAGCGATTGTAGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44V Q84Y T100I E154*",4
"lib1","SARS-CoV-2","CAAGCGCATCAAAAAG",1,0.34,NA,NA,NA,NA,NA,NA,"stop","N13P G86* P96R D112S Q144R",5
"lib1","SARS-CoV-2","CAAGCGGTATTGTAAA",10,152.36,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","I2H Y123E F167D Q176L",4
"lib1","SARS-CoV-2","CAAGCGTAAATAGATT",2,12.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3S S69R I104W S139H P169S",5
"lib1","SARS-CoV-2","CAAGCGTATACATAAA",2,5.63,NA,NA,NA,NA,NA,NA,"stop","K26G T63N S129*",3
"lib1","SARS-CoV-2","CAAGCGTGGCTTGAAA",3,54.21,10.8,0.04,0.09,2.94,1.03,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","CAAGCGTTGCTTTGGA",1,14.17,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A14E D59R N92K V103L S129L",5
"lib1","SARS-CoV-2","CAAGCTAAAAATCAAA",9,161.99,10.47,-0.29,0.05,2.93,1.02,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","CAAGCTAAAAATTAAC",1,56.14,10.1,-0.66,0.07,2.72,1.02,0,">1 nonsynonymous","I2T S29T F44V Y123V",4
"lib1","SARS-CoV-2","CAAGCTAAACCTATCG",6,29.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M D59I V77K Y121W P149Y P177T",6
"lib1","SARS-CoV-2","CAAGCTACAAAAACAT",2,0.63,NA,NA,NA,NA,NA,NA,"stop","A22V L38H L60T V77M Q84G I88S N107F S113* S147T P161F",10
"lib1","SARS-CoV-2","CAAGCTACACAATAGC",2,6.13,10.45,-0.32,0.12,2.8,1.14,0.01,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","CAAGCTACATGTGCAG",6,88.57,6.43,-4.33,0.49,1.5,1.18,0.02,">1 nonsynonymous","N92T P133A",2
"lib1","SARS-CoV-2","CAAGCTACCAAAAATT",4,127.08,10.54,-0.23,0.04,2.96,1,0,"1 nonsynonymous","T15H",1
"lib1","SARS-CoV-2","CAAGCTACGGACCCCC",12,188.55,10.58,-0.18,0.04,2.91,1.03,0,">1 nonsynonymous","P54H S69T",2
"lib1","SARS-CoV-2","CAAGCTCAAACCTGAA",5,183.03,9,-1.76,0.06,2.86,1.1,0,">1 nonsynonymous","I2C S43G Y119L",3
"lib1","SARS-CoV-2","CAAGCTCAATAATACA",3,88.43,9,-1.77,0.27,1.55,1.18,0.03,">1 nonsynonymous","K94V K128R A190V",3
"lib1","SARS-CoV-2","CAAGCTCACTAAGTAC",4,99.35,9.51,-1.25,0.06,2.89,1.08,0,">1 nonsynonymous","V37L Y119G",2
"lib1","SARS-CoV-2","CAAGCTCCACACCGAA",4,7.62,8.28,-2.48,0.39,1.5,1.1,0.07,">1 nonsynonymous","G83D K94M W106R D137F",4
"lib1","SARS-CoV-2","CAAGCTCTACAACGCA",2,49.25,7.95,-2.81,0.14,1.89,1.14,0.01,">1 nonsynonymous","T46L Y143C V173F",3
"lib1","SARS-CoV-2","CAAGCTGAAACGAGGA",4,49.07,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I28T C49Y D90F T100S S129T",5
"lib1","SARS-CoV-2","CAAGCTGCCAATCTCT",1,19.29,8.35,-2.41,0.17,2.59,1.14,0.01,">1 nonsynonymous","F12L C61S N151Y G166K",4
"lib1","SARS-CoV-2","CAAGCTGCCGTAGGCA",4,31.73,6.32,-4.45,0.89,1.5,1.2,0.05,">1 nonsynonymous","I88R Y123I S147A",3
"lib1","SARS-CoV-2","CAAGCTGGCAATAGAC",3,23.79,10.13,-0.64,0.06,2.71,1,0,">1 nonsynonymous","D112I T201K",2
"lib1","SARS-CoV-2","CAAGCTGTATCTGAAC",8,48.37,10.68,-0.09,0.08,2.85,1.08,0,">1 nonsynonymous","Y39K S45T L122Y",3
"lib1","SARS-CoV-2","CAAGCTGTTGTAGTCT",6,119.11,6.05,-4.71,1.03,1.5,1.23,0.02,">1 nonsynonymous","P82L T140Y P149S Y178S",4
"lib1","SARS-CoV-2","CAAGCTTCGGCCCAAG",1,12.7,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F62S A81K L95M Y119S E154G T170C",6
"lib1","SARS-CoV-2","CAAGCTTGACCACACT",1,0.68,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAGCTTTGCGCCAAT",6,153.49,10.6,-0.17,0.04,2.91,1.05,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","CAAGGAAAATATTGTA",4,49.85,9.82,-0.94,0.13,2.14,1.19,0.01,"1 nonsynonymous","S19R",1
"lib1","SARS-CoV-2","CAAGGAAAGGACGCAA",1,2.12,NA,NA,NA,NA,NA,NA,"stop","A14R L38*",2
"lib1","SARS-CoV-2","CAAGGAAAGTAAACAT",4,139.98,6.08,-4.68,0.56,1.5,1.16,0.01,">1 nonsynonymous","N130G G172D",2
"lib1","SARS-CoV-2","CAAGGAAATATAATGA",2,8.64,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","L5H Y50P S69A K94C Y121M T140Q",6
"lib1","SARS-CoV-2","CAAGGAACACGCTAAA",1,39.74,10.39,-0.38,0.21,2.46,1.1,0.02,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","CAAGGAACATATGACA",4,33.1,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","N64W N107M P177L",3
"lib1","SARS-CoV-2","CAAGGAACCGTTGACT",3,37.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N40K L122W R127H E135Y C158E V173T",6
"lib1","SARS-CoV-2","CAAGGAAGAATACTAA",4,100.38,9.64,-1.12,0.16,1.66,1.1,0.01,">1 nonsynonymous","C102W Y123F",2
"lib1","SARS-CoV-2","CAAGGAAGGATATGCA",7,102.11,10.1,-0.66,0.07,2.55,1.03,0,">1 nonsynonymous","A33E F134W",2
"lib1","SARS-CoV-2","CAAGGAAGGTCGCTAA",8,32.46,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C6Y S41A D112Y",3
"lib1","SARS-CoV-2","CAAGGAATAAAAATAT",2,47.6,10.06,-0.7,0.08,2.8,1.07,0,">1 nonsynonymous","A42V L60E T100L G155S S200C",5
"lib1","SARS-CoV-2","CAAGGAATTATCGTTA",4,32.22,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F62M L95Y N107S P133V P149C E154W",6
"lib1","SARS-CoV-2","CAAGGACCACACTGCA",2,6.48,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V65N A89F",2
"lib1","SARS-CoV-2","CAAGGACCATAGCTTA",6,68.37,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T55L Q176S V181Y",3
"lib1","SARS-CoV-2","CAAGGACGTTATGCGC",2,46.48,6.1,-4.66,0.52,1.52,1.14,0.01,">1 nonsynonymous","C6W R73N K94Y Y121N P177N",5
"lib1","SARS-CoV-2","CAAGGACTCAGATAGT",1,11.87,9.64,-1.12,0.21,1.75,1.23,0.03,">1 nonsynonymous","A14Q A42V W106R",3
"lib1","SARS-CoV-2","CAAGGACTCTTTAGCA",7,44.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44V N92R P177V",3
"lib1","SARS-CoV-2","CAAGGAGAAATGTAGT",6,168.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6A A81V I88K K94S G117V G155Y T170N Y178I",8
"lib1","SARS-CoV-2","CAAGGAGAATTTACTT",2,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H G83I W106R G166R",4
"lib1","SARS-CoV-2","CAAGGAGACACTATTG",3,28.68,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G83S D90F P96I",3
"lib1","SARS-CoV-2","CAAGGAGACTGCTACG",8,97.45,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F12C T55K D90L G174T T201W",5
"lib1","SARS-CoV-2","CAAGGAGAGCCCATAT",6,15.29,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A14C C49H V71G P96I D112R P149L",6
"lib1","SARS-CoV-2","CAAGGAGATACAACTG",1,28.15,8.43,-2.33,0.16,2.47,1.13,0.01,">1 nonsynonymous","L5P Q84M S113P",3
"lib1","SARS-CoV-2","CAAGGATATAGGATAG",9,133.08,10.22,-0.54,0.05,2.76,1.04,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","CAAGGATATTCTGCTG",10,60.87,9.38,-1.39,0.19,1.5,1.07,0.01,">1 nonsynonymous","P96I A192T",2
"lib1","SARS-CoV-2","CAAGGATGGCAACTTA",2,5.87,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A81Q G101S W106R",3
"lib1","SARS-CoV-2","CAAGGATTACAGAATA",6,110.22,6,-4.76,1.44,1.5,1.18,0.01,">1 nonsynonymous","P54K C150E G172R",3
"lib1","SARS-CoV-2","CAAGGATTATGTATAG",2,26.28,10.75,-0.01,0.06,2.92,1.06,0,"1 nonsynonymous","T3V",1
"lib1","SARS-CoV-2","CAAGGATTATTGAGTT",2,137.54,10.83,0.07,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGGATTCAACTTGT",1,9.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54W F99K",2
"lib1","SARS-CoV-2","CAAGGATTCTGGTTAC",2,8.96,6,-4.76,2,1.5,1.16,0.03,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","CAAGGATTGTCGATAA",3,23.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94S Y159K H189N",3
"lib1","SARS-CoV-2","CAAGGATTTATTAAAA",1,13.39,9.35,-1.41,0.24,2.56,1.29,0.04,">1 nonsynonymous","Y119H E141R S147L T201S",4
"lib1","SARS-CoV-2","CAAGGCAACGTCCAGC",3,81.69,9.89,-0.88,0.05,2.79,1.06,0,">1 nonsynonymous","K87S N120S F134L",3
"lib1","SARS-CoV-2","CAAGGCAATCAATTTC",10,169.18,10.53,-0.24,0.04,2.89,1.01,0,">1 nonsynonymous","N1A Y123W",2
"lib1","SARS-CoV-2","CAAGGCAATTTTACAG",7,6.98,NA,NA,NA,NA,NA,NA,"stop","A81* G116L Y123L P197G",4
"lib1","SARS-CoV-2","CAAGGCACAGGACGGG",4,0.66,NA,NA,NA,NA,NA,NA,"stop","A33* K56I S139P",3
"lib1","SARS-CoV-2","CAAGGCAGCAAAAAAA",3,50.69,9.96,-0.8,0.09,2.62,1.07,0,">1 nonsynonymous","F47K N64H",2
"lib1","SARS-CoV-2","CAAGGCATGACACACA",5,169.28,10.42,-0.35,0.05,2.89,1.07,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","CAAGGCCATCATGGCA",14,237.79,7.92,-2.85,0.14,2.14,1.16,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","CAAGGCCCTTGAAAAG",2,6.95,10.95,0.19,0.25,2.74,1.06,0.01,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","CAAGGCGAATCGAATT",4,36.83,10.74,-0.02,0.04,2.98,1.02,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","CAAGGCGCGAACCACA",2,13.54,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","G51W L131R E154F",3
"lib1","SARS-CoV-2","CAAGGCTTGGTTTGCC",1,44.25,10.76,-0.01,0.06,2.87,1.08,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","CAAGGGAAAATTAGCG",5,46.81,6,-4.76,1.43,1.5,1.13,0.01,">1 nonsynonymous","L5R A42G P96N N107T Y119G G152H T170Q",7
"lib1","SARS-CoV-2","CAAGGGAAATATTGAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152H",1
"lib1","SARS-CoV-2","CAAGGGAGAATATATA",2,13.66,8.87,-1.89,0.28,1.5,1.04,0.07,">1 nonsynonymous","C49T E154I",2
"lib1","SARS-CoV-2","CAAGGGAGTTTCACTT",1,68.27,10.97,0.21,0.09,2.85,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGGGATGAATTATG",3,11.29,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","W23V V181W",2
"lib1","SARS-CoV-2","CAAGGGATGTAACCAA",2,19.68,10.19,-0.57,0.16,2.52,1,0.01,">1 nonsynonymous","K56H R78C Y123L N130R E186S",5
"lib1","SARS-CoV-2","CAAGGGCAAACGAATG",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80V N107S Q163M",3
"lib1","SARS-CoV-2","CAAGGGCCAATAGTAA",4,38.28,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R27I I104C F167C",3
"lib1","SARS-CoV-2","CAAGGGCTCAAGAGTA",3,77.73,9.46,-1.3,0.15,1.73,1.14,0.01,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","CAAGGGCTTCTAATAA",2,39.06,9.13,-1.63,0.15,2.06,1.18,0.01,">1 nonsynonymous","L5Y V37H D112V T201K",4
"lib1","SARS-CoV-2","CAAGGGGAAAGAGAAA",1,2.24,NA,NA,NA,NA,NA,NA,"stop","S43A D59V G83R S113L Y143*",5
"lib1","SARS-CoV-2","CAAGGGGATCATTCAT",10,66.41,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","V77M G101I S129L P149M",4
"lib1","SARS-CoV-2","CAAGGGGCTCACTGAC",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84K G86D K87S W106C S200R",5
"lib1","SARS-CoV-2","CAAGGGGTTGATTTGC",5,175.7,10.78,0.02,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGGGTAGGACATTT",6,0.9,NA,NA,NA,NA,NA,NA,"stop","E10C T15E I28D V65* V71Y",5
"lib1","SARS-CoV-2","CAAGGGTGCTGAGCCA",9,77.51,9.16,-1.61,0.07,2.87,1.08,0,">1 nonsynonymous","K56Q Y119C",2
"lib1","SARS-CoV-2","CAAGGGTGGTCGAAAA",1,99.94,9.47,-1.3,0.1,2.7,1.1,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","CAAGGGTTGACCTTTA",4,95.24,10.44,-0.32,0.07,2.82,1.01,0,">1 nonsynonymous","V32H K48L P149G V173R",4
"lib1","SARS-CoV-2","CAAGGTAAAGGGACTT",6,182.15,6,-4.76,2,1.5,1.19,0,">1 nonsynonymous","R25H T46I G117T P161S",4
"lib1","SARS-CoV-2","CAAGGTAAGCTATATC",6,75.17,9.57,-1.19,0.11,2.52,1.06,0.01,">1 nonsynonymous","C6L K128T G152D",3
"lib1","SARS-CoV-2","CAAGGTAGACATTTCT",2,42.85,9.97,-0.79,0.1,2.32,1.05,0,">1 nonsynonymous","A42N L95C",2
"lib1","SARS-CoV-2","CAAGGTAGGCCAATCG",1,0.59,NA,NA,NA,NA,NA,NA,"stop","V11M A18E G51L Y91*",4
"lib1","SARS-CoV-2","CAAGGTAGTCAAGTAA",3,56.42,10.6,-0.17,0.06,2.9,1.08,0,">1 nonsynonymous","T63V K128M",2
"lib1","SARS-CoV-2","CAAGGTATCAAAGATA",7,34.53,6.21,-4.55,0.5,1.5,1.16,0.01,">1 nonsynonymous","V11H V103Q L122T S129R",4
"lib1","SARS-CoV-2","CAAGGTATTCGCGAAA",1,60.09,10.76,0,0.05,2.87,1.1,0,">1 nonsynonymous","T148M P197T",2
"lib1","SARS-CoV-2","CAAGGTATTGATGCGA",2,7.89,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6S D34S T63V V103N",4
"lib1","SARS-CoV-2","CAAGGTCACATCTGAT",2,7.27,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15N K94A S113L",3
"lib1","SARS-CoV-2","CAAGGTCGATCCTGGT",4,41.64,9.33,-1.44,0.18,1.78,1.17,0.01,">1 nonsynonymous","S41E A89Q",2
"lib1","SARS-CoV-2","CAAGGTCTTCTAATAC",2,14.95,10.7,-0.06,0.05,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGGTGAATGCAAGC",1,21.33,9.93,-0.84,0.13,2.63,1,0.01,">1 nonsynonymous","Y91S F160R",2
"lib1","SARS-CoV-2","CAAGGTGATTTTGGAG",6,6.5,NA,NA,NA,NA,NA,NA,"stop","C6I C31M I104* C158R",4
"lib1","SARS-CoV-2","CAAGGTTAAATACTAA",7,49.58,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9R P96L N120P S200Y",4
"lib1","SARS-CoV-2","CAAGGTTATCGAACAT",3,24.19,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5R I28K L60S N120V G155I",5
"lib1","SARS-CoV-2","CAAGGTTGGGCCCGGG",1,11.39,9.31,-1.45,0.31,1.66,1.17,0.06,">1 nonsynonymous","G9K G51S I80L L122I",4
"lib1","SARS-CoV-2","CAAGGTTTACACGATG",3,14.46,9.45,-1.31,0.24,1.76,1.15,0.03,">1 nonsynonymous","N107Q R127K P197A",3
"lib1","SARS-CoV-2","CAAGGTTTATTATGAA",9,96.22,9.98,-0.78,0.09,2.55,1.02,0,">1 nonsynonymous","E10F V77L S129V",3
"lib1","SARS-CoV-2","CAAGGTTTTCATCGAA",8,1.14,NA,NA,NA,NA,NA,NA,"stop","F47* D97V V103L Y119P",4
"lib1","SARS-CoV-2","CAAGTAAAAATAGATT",5,6.28,NA,NA,NA,NA,NA,NA,"stop","G51* V103K P133S",3
"lib1","SARS-CoV-2","CAAGTAAAAATATACT",4,60.68,10.71,-0.06,0.06,2.97,1,0,">1 nonsynonymous","L122V V153E",2
"lib1","SARS-CoV-2","CAAGTAAACCTTTACT",3,44.4,8.51,-2.25,0.1,1.62,1.18,0,">1 nonsynonymous","S41V D90L V115T G155M",4
"lib1","SARS-CoV-2","CAAGTAAATACTAAAC",2,14.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A33R D59F N107R F156L",4
"lib1","SARS-CoV-2","CAAGTAAATCTACTTG",6,2.02,NA,NA,NA,NA,NA,NA,"stop","S69* V103H",2
"lib1","SARS-CoV-2","CAAGTAACATACGGAG",2,41.14,10.47,-0.29,0.08,2.77,1.09,0,">1 nonsynonymous","K56L S129V",2
"lib1","SARS-CoV-2","CAAGTAACATATTGAA",10,126.56,10.84,0.07,0.07,2.89,1.05,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","CAAGTAAGAGAACTCT",11,135.36,6.08,-4.68,0.87,1.5,1.21,0.02,">1 nonsynonymous","S36T R124S",2
"lib1","SARS-CoV-2","CAAGTAAGCAACGATG",5,1.06,NA,NA,NA,NA,NA,NA,"stop","C61* G116L K128C",3
"lib1","SARS-CoV-2","CAAGTAATAGTTCACG",2,46.31,9.3,-1.46,0.11,1.9,1.11,0.01,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","CAAGTAATCGGCAATA",3,0,NA,NA,NA,NA,NA,NA,"stop","I2S F12V T55I R78S G101P F160* Q176H",7
"lib1","SARS-CoV-2","CAAGTAATTAAAAATA",1,16.55,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","G51F Q84T L95S K114T E135K",5
"lib1","SARS-CoV-2","CAAGTACAAACCGATT",1,5.06,6,-4.76,1.96,3,1.07,0.01,">1 nonsynonymous","G9D N118F A145W",3
"lib1","SARS-CoV-2","CAAGTACAATGCTATT",6,39.24,10.75,-0.01,0.03,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGTACACAACAAAA",2,55.7,10.42,-0.35,0.06,2.9,1.01,0,">1 nonsynonymous","A33L S129L",2
"lib1","SARS-CoV-2","CAAGTACAGAAAGCAC",3,102.39,10.7,-0.06,0.06,2.92,1.04,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","CAAGTACAGATGAATC",3,40.43,10.76,0,0.04,2.93,1.05,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","CAAGTACATAGCACGT",2,30.35,7.27,-3.5,0.19,1.5,1.1,0.01,">1 nonsynonymous","A22W A33W D137C",3
"lib1","SARS-CoV-2","CAAGTACATGGGGGAT",3,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C A105C T201M",3
"lib1","SARS-CoV-2","CAAGTACATTCGAAAA",7,40.05,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","T3N S36I T55N F99D N120S",5
"lib1","SARS-CoV-2","CAAGTACATTGACCTT",7,75.86,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N40W V71Y V180A",3
"lib1","SARS-CoV-2","CAAGTACCTCTAGAAG",1,7.33,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V37H T55V D112V E135G L162V",5
"lib1","SARS-CoV-2","CAAGTACGAGTAGTAT",9,2.63,NA,NA,NA,NA,NA,NA,"stop","A33I N107* E141W P149T",4
"lib1","SARS-CoV-2","CAAGTACGAGTGAACA",8,108.13,10.17,-0.59,0.08,2.55,1.04,0,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","CAAGTACGATTGATTA",12,57.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S69K G83V",2
"lib1","SARS-CoV-2","CAAGTACGCGCACAGA",3,75.57,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","K26Q G172I",2
"lib1","SARS-CoV-2","CAAGTACTAGCACCTT",3,46.27,6.42,-4.34,0.43,1.78,1.2,0.01,">1 nonsynonymous","Y93F R136E G152R T170L",4
"lib1","SARS-CoV-2","CAAGTACTGAGGACGT",1,17.43,7.1,-3.66,0.26,1.92,1.17,0.02,">1 nonsynonymous","V37I D98E I142F T170V",4
"lib1","SARS-CoV-2","CAAGTAGACGTATCCA",6,18.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1Y V103P",2
"lib1","SARS-CoV-2","CAAGTAGCATGTCAGG",2,70.99,10.31,-0.45,0.06,2.78,1,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","CAAGTAGGGATCCAAC",1,60.29,10.76,-0.01,0.09,2.9,1,0,"1 nonsynonymous","E141P",1
"lib1","SARS-CoV-2","CAAGTATAACACCTAC",1,34.57,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V182K S200V",2
"lib1","SARS-CoV-2","CAAGTATAACTCCTCT",1,56.69,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","W23L K87N P96S N107R V173S",5
"lib1","SARS-CoV-2","CAAGTATAATACTCTC",3,16.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99I G146F C158P",3
"lib1","SARS-CoV-2","CAAGTATCAGTACGTC",2,16.87,9.87,-0.89,0.17,2.36,1.03,0.01,">1 nonsynonymous","C61L D98T L122A Q144R P149L S200C",6
"lib1","SARS-CoV-2","CAAGTATGTAAACAAA",1,16.67,9.48,-1.28,0.28,1.72,1.16,0.04,"1 nonsynonymous","L162Q",1
"lib1","SARS-CoV-2","CAAGTATTACGAGATT",2,42.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1G I28L P82E S108P S129K Q163A",6
"lib1","SARS-CoV-2","CAAGTCAAATTTCGAC",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L L95K",2
"lib1","SARS-CoV-2","CAAGTCAACAAATCGT",8,74.44,10.74,-0.02,0.06,2.9,1.05,0,">1 nonsynonymous","N40E A190V",2
"lib1","SARS-CoV-2","CAAGTCACTAAGTATT",3,39.31,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10S K56M D68R V153T",4
"lib1","SARS-CoV-2","CAAGTCATAAAAAACT",4,50.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T15G G86W R127S G155S",4
"lib1","SARS-CoV-2","CAAGTCATTACACCAT",2,17.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60S G86M A105G R124H Q168P",5
"lib1","SARS-CoV-2","CAAGTCCAGAAGTTGG",3,2.3,NA,NA,NA,NA,NA,NA,"stop","L38* G86S N107H D112V",4
"lib1","SARS-CoV-2","CAAGTCCCGTGAATAG",10,44.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A14K S53L L131R",3
"lib1","SARS-CoV-2","CAAGTCCGACTATAAG",7,42.23,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","C102R N157R",2
"lib1","SARS-CoV-2","CAAGTCCTACTCGCTG",9,83.82,8.21,-2.55,0.31,1.5,1.14,0.03,">1 nonsynonymous","G83W Y91K N130H",3
"lib1","SARS-CoV-2","CAAGTCGAACTACTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q S43T A67N R73C D98S Y119E Q144F",7
"lib1","SARS-CoV-2","CAAGTCGCGTCAAAAC",1,0.57,NA,NA,NA,NA,NA,NA,"stop","L60N G74Y G117I G152* L183V T201A",6
"lib1","SARS-CoV-2","CAAGTCGTCATAAAAC",5,58.83,9.92,-0.84,0.08,2.1,1.04,0,"1 nonsynonymous","F99H",1
"lib1","SARS-CoV-2","CAAGTCTATAGCAGAA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","A22Q T46* T100P P149M",4
"lib1","SARS-CoV-2","CAAGTCTCACTTAATA",3,77.38,10.87,0.11,0.12,2.83,1.03,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","CAAGTCTCCCCAGAAA",2,0.62,NA,NA,NA,NA,NA,NA,"stop","S69R Y119*",2
"lib1","SARS-CoV-2","CAAGTCTGCAACTCGT",3,28.8,10.62,-0.14,0.15,2.95,1.02,0.02,">1 nonsynonymous","L60S T100V",2
"lib1","SARS-CoV-2","CAAGTGAAAAATTCAC",1,0.56,NA,NA,NA,NA,NA,NA,"stop","F8* N58L P96T A145T",4
"lib1","SARS-CoV-2","CAAGTGAAAATACGCG",1,21.23,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","C61G G86L",2
"lib1","SARS-CoV-2","CAAGTGAAAATATCAA",2,33.01,8.61,-2.16,0.43,1.5,1,0.06,">1 nonsynonymous","R27C A105L V173Q",3
"lib1","SARS-CoV-2","CAAGTGAACACACACA",9,150.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12D A33Q Y93F D112K K128V",5
"lib1","SARS-CoV-2","CAAGTGACAAGTCAAA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R K87T L95G N171S",4
"lib1","SARS-CoV-2","CAAGTGATATGACGAG",3,50.88,10.04,-0.73,0.08,2.11,1.06,0,">1 nonsynonymous","T15W G83K K198I",3
"lib1","SARS-CoV-2","CAAGTGATCTTTAGTT",1,6.29,6,-4.76,2,1.5,1.07,0.02,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","CAAGTGATGTAACTTG",8,130.77,10.16,-0.6,0.03,2.87,1.02,0,">1 nonsynonymous","S43N L60P I142L",3
"lib1","SARS-CoV-2","CAAGTGCACACCACCG",1,16.97,8.61,-2.15,0.18,1.5,1.05,0.02,">1 nonsynonymous","F8Q A14C T148A",3
"lib1","SARS-CoV-2","CAAGTGCCGATATTCT",4,26.08,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","D34L G146L N151M",3
"lib1","SARS-CoV-2","CAAGTGCCTTTTATGT",2,1.8,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAAGTGCTGCGTAATC",3,76.24,10.8,0.03,0.06,2.92,1.05,0,">1 nonsynonymous","V52I L60T",2
"lib1","SARS-CoV-2","CAAGTGGAATACAACC",3,19.38,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14S V52F C102T",3
"lib1","SARS-CoV-2","CAAGTGGACGTAAATT",2,12.54,6.54,-4.23,0.87,1.5,1.27,0.06,">1 nonsynonymous","L5M T15N R25W N64P V77S G83Y D90L F156R",8
"lib1","SARS-CoV-2","CAAGTGGCCAAAAGAA",3,6.15,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V103R G116K",2
"lib1","SARS-CoV-2","CAAGTGGGAATCTAAC",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S L60S S139F P149H F160V",5
"lib1","SARS-CoV-2","CAAGTGGTAACTCACG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","F99C V103T N118V F134N G174*",5
"lib1","SARS-CoV-2","CAAGTGTAAGGTCTAC",4,25.41,10.14,-0.62,0.1,2.34,1.02,0,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","CAAGTGTACATAGGTG",6,98.41,10.81,0.05,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAAGTGTATTTTCCAT",1,14.95,9.16,-1.61,0.21,1.95,1.07,0.03,">1 nonsynonymous","Y91T S129C",2
"lib1","SARS-CoV-2","CAAGTGTCTATAGCTA",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L N120D",2
"lib1","SARS-CoV-2","CAAGTGTGGTAGGGAA",2,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N G74M",2
"lib1","SARS-CoV-2","CAAGTGTTAATCGTTA",3,111.64,9.75,-1.02,0.11,1.87,1.1,0.01,">1 nonsynonymous","A33L Y39K L95M W106V",4
"lib1","SARS-CoV-2","CAAGTGTTCAGAGTTT",9,99.9,10.21,-0.55,0.07,2.81,1.03,0,">1 nonsynonymous","D90S D97G",2
"lib1","SARS-CoV-2","CAAGTTAAAAGACAAC",3,51.09,10.07,-0.7,0.1,2.25,1,0,">1 nonsynonymous","P54T Y91R",2
"lib1","SARS-CoV-2","CAAGTTAAAAGGGGGT",1,30.16,6.35,-4.41,0.45,1.5,1.15,0.02,">1 nonsynonymous","Y93R G155P",2
"lib1","SARS-CoV-2","CAAGTTAAGGTGTACC",2,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y S69R G86S G101R",4
"lib1","SARS-CoV-2","CAAGTTAATACATCAA",1,50.09,10.41,-0.36,0.08,2.91,1.05,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","CAAGTTAATTGAGCAG",1,0.41,NA,NA,NA,NA,NA,NA,"stop","I2L S53H L122A K128Y K198*",5
"lib1","SARS-CoV-2","CAAGTTACAGAATTCT",10,10.92,NA,NA,NA,NA,NA,NA,"stop","T148* N157R Y178V A190L",4
"lib1","SARS-CoV-2","CAAGTTACAGGTTGCT",1,8.79,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","A42S W106M D112R Y121T I142M",5
"lib1","SARS-CoV-2","CAAGTTACTCTACAGT",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W V77F P169L V173S",4
"lib1","SARS-CoV-2","CAAGTTACTTACATCA",1,28.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15I N24L V37W N64S K87I R136S L183I",7
"lib1","SARS-CoV-2","CAAGTTAGAACGAACA",4,10.47,10.21,-0.55,0.13,3,1.02,0.01,">1 nonsynonymous","G9L D97L",2
"lib1","SARS-CoV-2","CAAGTTAGAATGAAAA",1,51.57,10.64,-0.12,0.03,2.98,1,0,">1 nonsynonymous","S43P K56R",2
"lib1","SARS-CoV-2","CAAGTTAGACGCTAGT",12,30.63,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8I R16Y C49T V71N K199Y",5
"lib1","SARS-CoV-2","CAAGTTAGCAATTTCG",1,15.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N24T D34A V77D I88R",4
"lib1","SARS-CoV-2","CAAGTTATCAACGATC",8,43.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E D97G",2
"lib1","SARS-CoV-2","CAAGTTATTGTTATAG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","G9* A18L Y35A D90K N157Y Y178F",6
"lib1","SARS-CoV-2","CAAGTTCAACAACAAT",3,41.31,11.02,0.25,0.12,2.91,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAAGTTCAATATCCCC",6,86.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41R E76W A81S G86S T100N E135L V173S",7
"lib1","SARS-CoV-2","CAAGTTCATACATAAT",1,8.77,9.77,-0.99,0.15,2.82,1.07,0.01,">1 nonsynonymous","G9E Y123V K128N",3
"lib1","SARS-CoV-2","CAAGTTCCAACACCCA",4,10.94,10.36,-0.4,0.08,2.84,1.02,0,">1 nonsynonymous","I2L N13A R16S V37E",4
"lib1","SARS-CoV-2","CAAGTTCGTAGATTTT",5,0.19,NA,NA,NA,NA,NA,NA,"stop","N13* S43R Y123A",3
"lib1","SARS-CoV-2","CAAGTTCTTCTCGATC",2,17.51,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N13I D34Q F134S",3
"lib1","SARS-CoV-2","CAAGTTGAAGATGTCA",3,62.37,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","D59Y D98H R124P",3
"lib1","SARS-CoV-2","CAAGTTGAATCCAGTA",1,2.26,NA,NA,NA,NA,NA,NA,"stop","Y35V K128*",2
"lib1","SARS-CoV-2","CAAGTTGAGTGTTGCG",4,22.78,8.97,-1.79,0.19,1.5,1.04,0.03,">1 nonsynonymous","A81S F185A",2
"lib1","SARS-CoV-2","CAAGTTGATGTTCACA",1,72.23,10.65,-0.12,0.06,2.96,1,0,"1 nonsynonymous","N58V",1
"lib1","SARS-CoV-2","CAAGTTGCGTGCTCCT",3,60.9,10.68,-0.09,0.08,2.89,1.07,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","CAAGTTGTACCTTCGT",4,41.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35E L38M F44S N92H",4
"lib1","SARS-CoV-2","CAAGTTTAGAGAACGC",2,2.19,NA,NA,NA,NA,NA,NA,"stop","Y165* Q176F",2
"lib1","SARS-CoV-2","CAAGTTTCAACTATAG",14,159.45,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37T K48I P82N K114L",4
"lib1","SARS-CoV-2","CAAGTTTGTAAATTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I I138Y",2
"lib1","SARS-CoV-2","CAAGTTTTTCACGTGT",1,8,10.23,-0.54,0.07,3,1.03,0,">1 nonsynonymous","G9V D97N A190M",3
"lib1","SARS-CoV-2","CAAGTTTTTTCTTTGT",8,1.75,NA,NA,NA,NA,NA,NA,"stop","G51* T85* Y123E",3
"lib1","SARS-CoV-2","CAATAAAAACGAGTGT",3,60.46,9.87,-0.89,0.36,1.5,1,0.06,">1 nonsynonymous","Y35P D90M W106K K128T",4
"lib1","SARS-CoV-2","CAATAAAAACTAATTT",1,13.59,10.05,-0.71,0.11,2.11,1.02,0.01,"1 nonsynonymous","E76V",1
"lib1","SARS-CoV-2","CAATAAAAACTAGGAA",2,23.74,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","D97H S113C D137V Q168E",4
"lib1","SARS-CoV-2","CAATAAAAAGTATGCC",6,86.15,10.2,-0.57,0.05,2.94,1.01,0,"1 nonsynonymous","A33K",1
"lib1","SARS-CoV-2","CAATAAAACAAAAATT",6,94.99,10.38,-0.38,0.04,2.84,1.03,0,"1 nonsynonymous","D34S",1
"lib1","SARS-CoV-2","CAATAAAACCCAAACC",3,75.45,10.72,-0.04,0.05,2.9,1.02,0,">1 nonsynonymous","N64V V103I K199A",3
"lib1","SARS-CoV-2","CAATAAAACTTGCTAA",9,71.23,10.18,-0.59,0.08,2.78,1,0,">1 nonsynonymous","A14H S69T I138E",3
"lib1","SARS-CoV-2","CAATAAAACTTTCAGT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","V32L D97S R179*",3
"lib1","SARS-CoV-2","CAATAAAATATTGACT",1,31.06,10.45,-0.31,0.1,2.91,1.05,0,">1 nonsynonymous","P7S F12L K26V K56T N130L",5
"lib1","SARS-CoV-2","CAATAAAATTGGTTAC",1,24,10.26,-0.5,0.07,2.98,1.01,0,">1 nonsynonymous","P7A P133S",2
"lib1","SARS-CoV-2","CAATAAACAACCAAAA",3,185.63,10.55,-0.21,0.04,2.86,1.06,0,">1 nonsynonymous","N64A R78E T140I V173M",4
"lib1","SARS-CoV-2","CAATAAACATCTTTTC",3,26.05,7.97,-2.79,0.18,1.82,1.18,0.01,"1 nonsynonymous","C158A",1
"lib1","SARS-CoV-2","CAATAAACATGTATTG",11,41.01,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31V F70L A81T N92Y C158S",5
"lib1","SARS-CoV-2","CAATAAACATTAGAAT",3,20.77,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","F62D G86L A190F",3
"lib1","SARS-CoV-2","CAATAAACCACCCTAG",2,5.95,6,-4.76,2,3,1.03,0,">1 nonsynonymous","S41T V71C V77F",3
"lib1","SARS-CoV-2","CAATAAACCACTTTTT",1,28.96,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F12N N157W",2
"lib1","SARS-CoV-2","CAATAAACGAAAAAGG",8,42.25,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35I S43H A105D R179G",4
"lib1","SARS-CoV-2","CAATAAACGGTGAACG",4,62.78,10.62,-0.14,0.06,2.93,1.02,0,">1 nonsynonymous","K128S S164Y K198F",3
"lib1","SARS-CoV-2","CAATAAACTAAAAAAA",2,48.2,8.02,-2.74,0.3,1.52,1.18,0.03,">1 nonsynonymous","P7I C61K N107T",3
"lib1","SARS-CoV-2","CAATAAAGCTGACCGA",5,57.4,6,-4.76,1.34,1.5,1.21,0.02,">1 nonsynonymous","F8G S43T N58Q D98W K132G I142D",6
"lib1","SARS-CoV-2","CAATAAAGTCCTACTA",1,36.72,6.3,-4.47,0.68,1.5,1.17,0.03,">1 nonsynonymous","D98I C158R",2
"lib1","SARS-CoV-2","CAATAAAGTTTCTTCA",2,31.38,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R16E V103L T148S C158S",4
"lib1","SARS-CoV-2","CAATAAATAAGCCTAG",6,73.01,10.83,0.06,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAAATACATAATT",6,32.65,9.53,-1.23,0.2,1.54,1.16,0.02,"1 nonsynonymous","P96Y",1
"lib1","SARS-CoV-2","CAATAAATACTGAGGC",4,20.4,6.35,-4.41,0.78,1.5,1.21,0.04,">1 nonsynonymous","F12S S45K F99L Y119A F126Y L183P",6
"lib1","SARS-CoV-2","CAATAAATATTCCTAA",6,21.45,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F44L I80N Q144D",3
"lib1","SARS-CoV-2","CAATAAATGAAGTATA",2,22.52,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","N4P S19R W106L",3
"lib1","SARS-CoV-2","CAATAAATGCATCTAT",1,33.29,6,-4.76,1.17,1.5,1.09,0.01,">1 nonsynonymous","P82D C158S Y165R",3
"lib1","SARS-CoV-2","CAATAAATGCCAGAAA",4,105.18,10.71,-0.06,0.05,2.94,1.01,0,">1 nonsynonymous","K114L T201M",2
"lib1","SARS-CoV-2","CAATAAATGTAGCAAT",2,73.71,10.3,-0.47,0.06,2.94,1.03,0,">1 nonsynonymous","T3V N30S V37L N120E",4
"lib1","SARS-CoV-2","CAATAAATTAGAGAAG",3,71.06,10.42,-0.35,0.04,2.92,1.03,0,"1 nonsynonymous","Y178C",1
"lib1","SARS-CoV-2","CAATAACAAGCAACGG",2,14.68,8.32,-2.44,0.32,1.5,1.21,0.04,">1 nonsynonymous","D34L D98S K128C I138L",4
"lib1","SARS-CoV-2","CAATAACAAGGTCTCG",4,14.06,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F12M L95A N130L E141R",4
"lib1","SARS-CoV-2","CAATAACACTTTACTA",9,112.54,8.4,-2.36,0.1,1.68,1.12,0,">1 nonsynonymous","L5T G51V F126C",3
"lib1","SARS-CoV-2","CAATAACAGGTATGTA",1,18.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P54I F70I Y91D P133E I142P G155T",6
"lib1","SARS-CoV-2","CAATAACATAAGACCG",3,11.89,10.29,-0.47,0.28,1.5,1,0.04,">1 nonsynonymous","F70V G83I I88N D112L",4
"lib1","SARS-CoV-2","CAATAACCCGAAAATG",1,17.78,8.43,-2.33,0.26,2.02,1.07,0.02,">1 nonsynonymous","E10T D98A G174I",3
"lib1","SARS-CoV-2","CAATAACCGTAGACAA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","F12K T46L D97A S113*",4
"lib1","SARS-CoV-2","CAATAACCTGAAGTTT",4,106.65,10.31,-0.45,0.04,2.83,1.03,0,"1 nonsynonymous","Y50H",1
"lib1","SARS-CoV-2","CAATAACCTTAAACAA",2,25.9,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L38R T55D S113Q P149E",4
"lib1","SARS-CoV-2","CAATAACGAATTAGCA",2,106.54,10.2,-0.57,0.07,2.58,1,0,">1 nonsynonymous","I2F I104H",2
"lib1","SARS-CoV-2","CAATAACTCTGAAAAG",3,59.59,9.72,-1.04,0.05,2.85,1.07,0,"1 nonsynonymous","K114P",1
"lib1","SARS-CoV-2","CAATAACTGATAGACC",2,27.94,10.11,-0.66,0.16,2.5,1,0.01,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","CAATAACTGTTGGATA",1,14.63,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12R K56L R78L Y91L V103G",5
"lib1","SARS-CoV-2","CAATAAGAAGAAACCG",2,72.76,9.19,-1.58,0.1,2.42,1.12,0,">1 nonsynonymous","K56F D90S E141T F156L",4
"lib1","SARS-CoV-2","CAATAAGAGGCTAATA",9,92.27,10.6,-0.16,0.05,2.96,1,0,">1 nonsynonymous","D97R S129Y",2
"lib1","SARS-CoV-2","CAATAAGCAAGGTTAT",1,17.23,9.96,-0.81,0.26,1.9,1,0.05,">1 nonsynonymous","D34P A81T A190S",3
"lib1","SARS-CoV-2","CAATAAGCAGGATCGT",3,20.65,10.63,-0.13,0.05,2.99,1,0,">1 nonsynonymous","R16M V37S P197T",3
"lib1","SARS-CoV-2","CAATAAGCCGAAAGTA",3,2.79,NA,NA,NA,NA,NA,NA,"stop","I88* I104M Q144K P149L",4
"lib1","SARS-CoV-2","CAATAAGCCGGGAACA",1,29.46,10.77,0.01,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAAGCGCCAGAAT",4,40.77,6,-4.76,2,1.5,1.18,0.04,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","CAATAAGCGTACAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* Y159V",2
"lib1","SARS-CoV-2","CAATAAGCTTGCACGA",3,55.98,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y39M I72H E141S Q176W L187Q",5
"lib1","SARS-CoV-2","CAATAAGGAAAAAACC",4,15.5,9.34,-1.43,0.37,1.96,1.12,0.07,">1 nonsynonymous","E76D Y121T",2
"lib1","SARS-CoV-2","CAATAAGGAGTAATAT",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S G83R D90P",3
"lib1","SARS-CoV-2","CAATAAGGAGTTATCG",1,44.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63V P96I L122P",3
"lib1","SARS-CoV-2","CAATAAGGCGCCCAGC",1,15.29,9.02,-1.74,0.08,2.75,1.11,0.01,">1 nonsynonymous","D59R G146R",2
"lib1","SARS-CoV-2","CAATAAGGGTGATATA",12,166.97,6,-4.76,0.9,1.5,1.17,0.01,">1 nonsynonymous","I2M V37G Y66A D90N N107C P161S",6
"lib1","SARS-CoV-2","CAATAAGTGTGTGATT",2,6.58,7.47,-3.29,0.22,1.5,1.1,0.01,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","CAATAATAAATTAAAA",5,59.43,10.75,-0.01,0.06,2.96,1.03,0,">1 nonsynonymous","R27M S147R",2
"lib1","SARS-CoV-2","CAATAATAACAAAATA",5,18.05,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I80M R127S Y143V T148V",4
"lib1","SARS-CoV-2","CAATAATAAGAAGTTC",2,121.16,10.65,-0.11,0.06,2.9,1.04,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","CAATAATAGCCCAAAT",8,74.94,6.09,-4.67,0.48,1.5,1.14,0.01,">1 nonsynonymous","L38K Y165L N171M",3
"lib1","SARS-CoV-2","CAATAATAGGACGTTT",6,77.04,10.63,-0.13,0.04,2.91,1.03,0,"1 nonsynonymous","S164F",1
"lib1","SARS-CoV-2","CAATAATAGGAGCTTT",8,20.32,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","I104V G152N V180H",3
"lib1","SARS-CoV-2","CAATAATATATGCGGA",5,50.26,10.54,-0.23,0.06,2.98,1.01,0,">1 nonsynonymous","K87L L122R T201M",3
"lib1","SARS-CoV-2","CAATAATATCTATGAT",10,150.91,10.07,-0.69,0.04,2.89,1,0,">1 nonsynonymous","D98N Y143L P149E",3
"lib1","SARS-CoV-2","CAATAATATGGGAAGC",5,36.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35T C49V K87G",3
"lib1","SARS-CoV-2","CAATAATCAGTACGAA",1,5.42,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D59L N107L N118M V181F V182F",5
"lib1","SARS-CoV-2","CAATAATCGAATTTGC",5,63.61,8.98,-1.78,0.18,1.51,1.16,0.02,">1 nonsynonymous","F17E E154S",2
"lib1","SARS-CoV-2","CAATAATGACCAATAG",2,13.11,9.62,-1.14,0.42,1.5,1,0.08,">1 nonsynonymous","G83D Y91S",2
"lib1","SARS-CoV-2","CAATAATGACCGACTC",5,40.73,10.76,-0.01,0.08,2.89,1.09,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","CAATAATGATAAAGCA",5,45.51,10.68,-0.09,0.05,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAATGGAGTATAG",4,13.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D59I P96S N107T G166S F185S",5
"lib1","SARS-CoV-2","CAATAATGTCAGGCAA",4,58.52,10.8,0.03,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAATGTTAACTAA",3,26.53,9.95,-0.81,0.07,2.56,1,0,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","CAATAATTACAGTGAT",5,133.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V20W S29Q R124N G146T",4
"lib1","SARS-CoV-2","CAATAATTATACTAAC",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98P T140S",2
"lib1","SARS-CoV-2","CAATACAAAAAACTCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V D68T A105V A145G G152D P169L",6
"lib1","SARS-CoV-2","CAATACAAAAACGTAC",4,28.21,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F17M T63S C102S S129A",4
"lib1","SARS-CoV-2","CAATACAAACAAAAAC",3,18.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V52K P149S C158S",3
"lib1","SARS-CoV-2","CAATACAAACTTTATC",5,12.43,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","L5F F44R T55F W106T G146L V180K P197R T201S",8
"lib1","SARS-CoV-2","CAATACAAAGACAGAA",4,64.68,10.62,-0.15,0.06,2.9,1.05,0,">1 nonsynonymous","S36G F160V",2
"lib1","SARS-CoV-2","CAATACAAGTGGTATA",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L D90F",2
"lib1","SARS-CoV-2","CAATACACAAGAAATT",6,69.55,6.17,-4.6,1.01,1.5,1.26,0.03,">1 nonsynonymous","N4L V11A N151P",3
"lib1","SARS-CoV-2","CAATACACAGCCCCAA",1,21.16,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44L L57R P96N C150L Q176L",5
"lib1","SARS-CoV-2","CAATACACAGCTTCCT",4,25.2,10.7,-0.06,0.05,3,1,0,"1 nonsynonymous","F134Q",1
"lib1","SARS-CoV-2","CAATACACTAAACTGA",11,106.39,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Q84N P96R P149L P177T",4
"lib1","SARS-CoV-2","CAATACACTAGACGAC",6,74.83,10.09,-0.68,0.09,2.6,1.04,0,">1 nonsynonymous","A14S F44K K198P",3
"lib1","SARS-CoV-2","CAATACATCATAAGAT",1,11.52,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","I88S Y119F",2
"lib1","SARS-CoV-2","CAATACATCGTATCTA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y L122W",2
"lib1","SARS-CoV-2","CAATACATGAACAATA",2,46.08,10.66,-0.1,0.08,2.9,1.07,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","CAATACATTAAGAAAA",9,44.67,8.87,-1.89,0.23,1.51,1.22,0.02,">1 nonsynonymous","T3M Y91I N130C G152D",4
"lib1","SARS-CoV-2","CAATACATTAGGCAAT",1,130.89,10.76,0,0.07,2.9,1.07,0,">1 nonsynonymous","N4S N110A",2
"lib1","SARS-CoV-2","CAATACATTGCTACAC",3,41.66,9.72,-1.04,0.17,2.24,1.06,0.01,">1 nonsynonymous","A105N P197Q",2
"lib1","SARS-CoV-2","CAATACATTTTATGGA",3,56.87,9.91,-0.86,0.07,2.82,1,0,">1 nonsynonymous","N64S I142K",2
"lib1","SARS-CoV-2","CAATACCAAAGCTAAG",8,149.03,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34R N40F N58S P82S",4
"lib1","SARS-CoV-2","CAATACCAACTCGGCG",7,166.29,10.74,-0.02,0.04,2.97,1.01,0,">1 nonsynonymous","D98S S129R",2
"lib1","SARS-CoV-2","CAATACCAATTAAGCG",2,46.49,8.76,-2,0.17,2.67,1.04,0.01,">1 nonsynonymous","P96G G166L T201M",3
"lib1","SARS-CoV-2","CAATACCATCCACGCA",2,20.82,9.22,-1.55,0.29,2.25,1.06,0.07,">1 nonsynonymous","N13H A22N R127I",3
"lib1","SARS-CoV-2","CAATACCCATAGTACT",4,15.58,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L38K P54S T100A Y143V",4
"lib1","SARS-CoV-2","CAATACCCGGGGGACA",4,100.69,10.21,-0.56,0.06,2.79,1.03,0,">1 nonsynonymous","S29C Q84L T201G",3
"lib1","SARS-CoV-2","CAATACCCTATCCTAC",2,10.84,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","G101I F160T",2
"lib1","SARS-CoV-2","CAATACCGAATACAAT",5,42.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19W P149M F156I",3
"lib1","SARS-CoV-2","CAATACCTGTCGGCAA",8,106.73,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14D R27M Y35V F44L V71S D97S N130K",7
"lib1","SARS-CoV-2","CAATACCTTAGTAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8L Y21F T100R Y119*",4
"lib1","SARS-CoV-2","CAATACGAAGGTTTCA",6,110.36,10.7,-0.07,0.06,2.89,1.07,0,"1 nonsynonymous","P197A",1
"lib1","SARS-CoV-2","CAATACGAATATAGTT",6,70.71,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S19R N92D Y175M",3
"lib1","SARS-CoV-2","CAATACGACGGTGCTG",1,14.7,8.99,-1.77,0.11,2.12,1.08,0,">1 nonsynonymous","N40A K48S G174V",3
"lib1","SARS-CoV-2","CAATACGACTGGGTTA",3,68.64,10.04,-0.73,0.05,2.82,1.07,0,">1 nonsynonymous","D59V K87A",2
"lib1","SARS-CoV-2","CAATACGCAAACCTAC",3,32.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47Y S139N Q168P H189Q",4
"lib1","SARS-CoV-2","CAATACGCTAACGATG",2,28.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T15D G86I Y165R V173N",4
"lib1","SARS-CoV-2","CAATACGCTCAAATAA",9,34.52,6.96,-3.81,0.36,1.5,1.11,0.03,">1 nonsynonymous","F99T E154Y",2
"lib1","SARS-CoV-2","CAATACGCTTCAGCGT",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G G101L",2
"lib1","SARS-CoV-2","CAATACGGATTGGGTT",4,1.9,NA,NA,NA,NA,NA,NA,"stop","S19P W23V Y66R I88K I104* N151K S200Y",7
"lib1","SARS-CoV-2","CAATACGGCGCATGTT",12,165.01,10.8,0.04,0.06,2.94,1.03,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","CAATACGGTAACAAAA",6,55.24,7.85,-2.92,0.26,1.5,1.15,0.02,"1 nonsynonymous","D137L",1
"lib1","SARS-CoV-2","CAATACGGTATGCCAA",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W V115G S139G A190V",4
"lib1","SARS-CoV-2","CAATACGTTTATAACT",3,101.26,10.36,-0.4,0.04,2.84,1.04,0,">1 nonsynonymous","L60A Y123V",2
"lib1","SARS-CoV-2","CAATACTACTCTTCGA",2,113.26,9.92,-0.84,0.09,2.08,1.04,0,">1 nonsynonymous","A14V W106A P197S",3
"lib1","SARS-CoV-2","CAATACTAGATTAGGT",3,22.46,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","V20W K114A Y119H F167G",4
"lib1","SARS-CoV-2","CAATACTAGCGCCCGC",3,39.26,10.49,-0.27,0.08,2.88,1,0,">1 nonsynonymous","A22Q T100E",2
"lib1","SARS-CoV-2","CAATACTAGCTCCATC",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D V103P Y143L",3
"lib1","SARS-CoV-2","CAATACTCTAACTCCT",1,12.88,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P82E D98H P149N",3
"lib1","SARS-CoV-2","CAATACTGACCGGAGA",3,6.74,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","W106C E135W P197K",3
"lib1","SARS-CoV-2","CAATACTGAGAAATAG",3,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I S41F D68M",3
"lib1","SARS-CoV-2","CAATACTGGAATGTAT",3,28.24,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G9R F47I N107D T170L",4
"lib1","SARS-CoV-2","CAATACTGGCTCGAGT",3,24.75,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","K56T D90I D97A F99I",4
"lib1","SARS-CoV-2","CAATACTGTAGTATAC",4,21.76,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86F V103L",2
"lib1","SARS-CoV-2","CAATACTGTGAATCTA",1,11.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42C G101I S129R",3
"lib1","SARS-CoV-2","CAATACTTAATACTGA",11,110.54,10.74,-0.03,0.07,2.89,1.09,0,"1 nonsynonymous","S36K",1
"lib1","SARS-CoV-2","CAATACTTTAAGAATG",5,2.28,NA,NA,NA,NA,NA,NA,"stop","G74* F99T W106G",3
"lib1","SARS-CoV-2","CAATACTTTTAGTGAA",10,80.57,10.51,-0.25,0.03,2.91,1.01,0,">1 nonsynonymous","N4S D90C",2
"lib1","SARS-CoV-2","CAATAGAAAAACATTC",1,11.12,7.4,-3.37,0.31,1.5,1.1,0.02,">1 nonsynonymous","R16P W23K",2
"lib1","SARS-CoV-2","CAATAGAAAAAGAATT",2,30.57,10.68,-0.08,0.06,2.93,1.03,0,">1 nonsynonymous","Y35L V115N",2
"lib1","SARS-CoV-2","CAATAGAAGGTATTGA",8,118.72,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y143I Y175C",2
"lib1","SARS-CoV-2","CAATAGAATGTACAGT",5,70.6,10.59,-0.17,0.06,2.82,1.07,0,"1 nonsynonymous","A18Q",1
"lib1","SARS-CoV-2","CAATAGACAGACTTTC",3,19.81,10.64,-0.12,0.06,2.87,1.1,0,">1 nonsynonymous","N40S R78V D97L",3
"lib1","SARS-CoV-2","CAATAGACATAAGGAC",2,7.63,10.68,-0.09,0.08,2.97,1,0,">1 nonsynonymous","S41G T201N",2
"lib1","SARS-CoV-2","CAATAGACATCCAAAT",8,67.87,10.18,-0.59,0.08,2.83,1.03,0,">1 nonsynonymous","P7R N64K K114T",3
"lib1","SARS-CoV-2","CAATAGACTTTAAAGG",5,70.21,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K94N K132T C150W F160S",4
"lib1","SARS-CoV-2","CAATAGAGAACAAGAC",2,15.56,7.1,-3.66,0.28,1.5,1.13,0.02,">1 nonsynonymous","N13I N107K",2
"lib1","SARS-CoV-2","CAATAGAGAGGAACGC",3,5.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S Q84L K94S",3
"lib1","SARS-CoV-2","CAATAGAGAGGAGGGA",6,98.56,8.51,-2.26,0.1,2.84,1.05,0.01,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","CAATAGAGGTGCGAAC",10,15.87,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A22R S43V V103D Y119K",4
"lib1","SARS-CoV-2","CAATAGAGTTCTTACC",10,29.52,9.84,-0.92,0.16,1.88,1.1,0.01,">1 nonsynonymous","A22N K94Y N120G",3
"lib1","SARS-CoV-2","CAATAGATCCGTGAAT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","T46D Q168* A190T",3
"lib1","SARS-CoV-2","CAATAGATGACTAATA",2,12.48,6.83,-3.93,0.32,1.5,1.05,0.03,">1 nonsynonymous","S19F S45G K87N F134C T148V",5
"lib1","SARS-CoV-2","CAATAGCCACACGAAG",2,36.8,10.25,-0.51,0.07,2.82,1.05,0,">1 nonsynonymous","N13T K114W",2
"lib1","SARS-CoV-2","CAATAGCCAGGATTGC",7,127.64,10.72,-0.05,0.06,2.87,1.05,0,">1 nonsynonymous","I104L K199N",2
"lib1","SARS-CoV-2","CAATAGCCCATAATAC",3,15.14,6.31,-4.46,0.15,1.5,1.01,0,">1 nonsynonymous","N64W Q84Y V103L R124K",4
"lib1","SARS-CoV-2","CAATAGCTATCGCAAC",5,17.37,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6R T100N G174Y",3
"lib1","SARS-CoV-2","CAATAGCTCACCTTAG",2,34.17,10.69,-0.07,0.08,2.91,1.03,0,"1 nonsynonymous","P54E",1
"lib1","SARS-CoV-2","CAATAGCTGTTGGGCT",1,9.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S43P L60R P96I G116N G174Q",5
"lib1","SARS-CoV-2","CAATAGGAAACAAAGT",4,125.41,10.7,-0.06,0.05,2.94,1.03,0,">1 nonsynonymous","L5S Y35M",2
"lib1","SARS-CoV-2","CAATAGGAACAAGAAA",2,25.85,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C31D L57Q Y121V G174N",4
"lib1","SARS-CoV-2","CAATAGGAATAATAGA",6,46.81,6.61,-4.15,0.4,1.5,1.21,0.02,">1 nonsynonymous","R27E Y66V Y121V F134K",4
"lib1","SARS-CoV-2","CAATAGGATAATCATA",6,122.05,10.76,0,0.06,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAGGCAAGAGCTA",3,48.45,10.87,0.1,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATAGGCCGTAGCAT",8,101.6,6,-4.76,1.68,1.5,1.15,0.01,">1 nonsynonymous","P7A F12Y C49Y N109S G116R Y121S",6
"lib1","SARS-CoV-2","CAATAGGCGACGTTAA",11,14.46,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","G86K D98F R127M L183R",4
"lib1","SARS-CoV-2","CAATAGGCGCCCGCAA",3,12.21,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A42E A81F Y119W G146Y",4
"lib1","SARS-CoV-2","CAATAGGCTCTACTTG",5,23.39,10.46,-0.31,0.1,2.8,1.05,0.01,">1 nonsynonymous","Y175F P191F",2
"lib1","SARS-CoV-2","CAATAGGGATAGATTA",4,85.54,6,-4.76,2,3,1.21,0,">1 nonsynonymous","V11A S41C D90S D98E R127S G166A G174K",7
"lib1","SARS-CoV-2","CAATAGGGATAGCTAA",3,16.23,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","D59S R73N D137N Q144D G166E V182Y",6
"lib1","SARS-CoV-2","CAATAGGGTTATAAAG",1,3.34,NA,NA,NA,NA,NA,NA,"stop","D34S C150* F156E",3
"lib1","SARS-CoV-2","CAATAGGTCGGGTCAT",14,55.31,9.58,-1.19,0.12,1.87,1.12,0.01,">1 nonsynonymous","P96R G155A K199W",3
"lib1","SARS-CoV-2","CAATAGGTCGTTGATT",2,10.25,9.73,-1.03,0.23,2.3,1.14,0.04,">1 nonsynonymous","V11A C61F L122M",3
"lib1","SARS-CoV-2","CAATAGTACACCTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","S43* S53F S108T L122A",4
"lib1","SARS-CoV-2","CAATAGTACATCTGAT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49P S200W",2
"lib1","SARS-CoV-2","CAATAGTATAATACCT",2,9.54,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T63W F99Q",2
"lib1","SARS-CoV-2","CAATAGTCCTCGGTAA",1,8.44,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","V11I K48V Q84P I88M L122W T140F",6
"lib1","SARS-CoV-2","CAATAGTCTACCATTT",3,74.32,10.01,-0.75,0.09,2.82,1.02,0,">1 nonsynonymous","G83C Y119R",2
"lib1","SARS-CoV-2","CAATAGTCTGGTGAAA",7,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y T148E",2
"lib1","SARS-CoV-2","CAATAGTCTTTGAAAG",4,53.51,10.74,-0.03,0.03,2.97,1.01,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","CAATAGTTCCTACACG",9,110.72,10.67,-0.1,0.06,2.9,1.05,0,"1 nonsynonymous","K199N",1
"lib1","SARS-CoV-2","CAATAGTTTATGACAA",3,18.87,6.76,-4,2,1.5,1.06,0.02,">1 nonsynonymous","G83V F99V R127V",3
"lib1","SARS-CoV-2","CAATATAAAACGTATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","CAATATAAAGAGTGTA",4,66.29,9.91,-0.86,0.13,2.18,1,0.01,">1 nonsynonymous","A89V I138R",2
"lib1","SARS-CoV-2","CAATATAAATACCTTT",3,66.07,10.86,0.1,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATATAAATATCTTA",6,55.6,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","N120W G146E G172W",3
"lib1","SARS-CoV-2","CAATATAAATTATAAG",10,193.98,10.38,-0.38,0.04,2.8,1.04,0,">1 nonsynonymous","N13K K128A",2
"lib1","SARS-CoV-2","CAATATAACAGCGAAT",3,39.05,10.64,-0.12,0.13,2.83,1.05,0.01,">1 nonsynonymous","P7Q F44Y",2
"lib1","SARS-CoV-2","CAATATAAGACTGAAA",1,43.06,6,-4.76,1.3,1.5,1.14,0.01,">1 nonsynonymous","N4F A67P G146L C195R",4
"lib1","SARS-CoV-2","CAATATAAGATCAAAC",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76G N130K G146P C158T",4
"lib1","SARS-CoV-2","CAATATAAGATGAGAC",9,122.5,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L95F G146V N157R S200L",4
"lib1","SARS-CoV-2","CAATATAAGGAAATAT",1,12.21,10.81,0.04,0.17,2.91,1,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CAATATAATAGTAAAA",8,113.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16E F44D T63L L95V Y165V T170G T201W",7
"lib1","SARS-CoV-2","CAATATAATCTCTACG",1,39.67,10.35,-0.42,0.06,2.91,1,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","CAATATACAAGAAAAT",1,42.02,8.2,-2.56,0.18,1.96,1.08,0.01,">1 nonsynonymous","A18R G51S I104L Y119N",4
"lib1","SARS-CoV-2","CAATATACACCTTTAA",7,160.52,8.61,-2.16,0.06,2.85,1.06,0,"1 nonsynonymous","Y159Q",1
"lib1","SARS-CoV-2","CAATATACACTGTGGA",4,65.53,10.74,-0.02,0.11,2.78,1.01,0,">1 nonsynonymous","T85I D98E N110Y Q168H",4
"lib1","SARS-CoV-2","CAATATACATCTTGAA",1,41.5,9.68,-1.08,0.1,1.78,1.06,0,">1 nonsynonymous","A14S L57H N151W",3
"lib1","SARS-CoV-2","CAATATACTGGGTCGT",1,25.55,10.79,0.03,0.07,2.95,1,0,"1 nonsynonymous","S184I",1
"lib1","SARS-CoV-2","CAATATACTTAATATA",2,81.93,10.77,0.01,0.06,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATATACTTACATCA",6,0.23,NA,NA,NA,NA,NA,NA,"stop","L60R N110* K128Q V182L",4
"lib1","SARS-CoV-2","CAATATAGAAATATCA",5,56.3,9.82,-0.94,0.1,2.08,1.1,0.01,">1 nonsynonymous","A42Q C61L A105F",3
"lib1","SARS-CoV-2","CAATATAGACGCGAAA",2,11.03,7.18,-3.58,0.49,1.5,1.09,0.07,">1 nonsynonymous","F17E L95G",2
"lib1","SARS-CoV-2","CAATATAGGTCCACAA",10,124.16,6.01,-4.76,0.91,1.5,1.19,0.01,"1 nonsynonymous","Y93V",1
"lib1","SARS-CoV-2","CAATATAGTTAGCTAA",2,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M D59A Q84V I88R C102S S129C",6
"lib1","SARS-CoV-2","CAATATATATGCCTAC",2,54.64,8.21,-2.55,0.14,2.45,1.08,0.01,">1 nonsynonymous","G9M Y143S",2
"lib1","SARS-CoV-2","CAATATATCACTTGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","L60* Y93S Y119G F126Y",4
"lib1","SARS-CoV-2","CAATATATCTAACTTT",3,1.2,NA,NA,NA,NA,NA,NA,"stop","T46W V65* W106T Q144H Y165L",5
"lib1","SARS-CoV-2","CAATATATCTCAAGAC",2,61.33,10.75,-0.01,0.06,2.92,1.02,0,">1 nonsynonymous","K56R K94H",2
"lib1","SARS-CoV-2","CAATATATGCCCTCAA",1,25.61,10.53,-0.23,0.11,2.79,1.11,0.01,">1 nonsynonymous","V115S S164M",2
"lib1","SARS-CoV-2","CAATATATGCGTCAAA",1,18.52,10.3,-0.47,0.09,2.85,1.04,0.01,">1 nonsynonymous","S36F E141V",2
"lib1","SARS-CoV-2","CAATATATGGAGTTCA",2,108.96,10.86,0.1,0.08,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATATATTGACGTAT",1,81.53,9.62,-1.14,0.08,2.8,1.06,0,"1 nonsynonymous","G117T",1
"lib1","SARS-CoV-2","CAATATCAATAACGCC",6,52.6,8.69,-2.08,0.1,2.87,1.03,0,">1 nonsynonymous","E10G Y119A L125M R136K",4
"lib1","SARS-CoV-2","CAATATCACAGAGACT",1,14.66,9.91,-0.85,0.18,2.57,1.12,0.01,">1 nonsynonymous","N64P D90C",2
"lib1","SARS-CoV-2","CAATATCACCTTTAAT",6,48.93,10.84,0.08,0.09,2.96,1.01,0,"1 nonsynonymous","E76Q",1
"lib1","SARS-CoV-2","CAATATCATGAAGACG",2,61.22,10.38,-0.39,0.05,2.91,1.06,0,">1 nonsynonymous","K87A T193N",2
"lib1","SARS-CoV-2","CAATATCCATATTTAA",1,8.35,6,-4.76,2,1.5,1.17,0.07,">1 nonsynonymous","G101R T201E",2
"lib1","SARS-CoV-2","CAATATCCCAAGCGGA",2,26.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T85R D98K S113G R124L S129T",5
"lib1","SARS-CoV-2","CAATATCCCAATACAT",3,746.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10T P82Q T140I P177N",4
"lib1","SARS-CoV-2","CAATATCCTAGCAATA",9,110.64,10.61,-0.15,0.04,2.89,1.01,0,">1 nonsynonymous","N4F T201C",2
"lib1","SARS-CoV-2","CAATATCGCATAAAAA",5,33.8,9.38,-1.38,0.11,1.81,1.09,0,">1 nonsynonymous","I2V T55N Y66I R127G A190I",5
"lib1","SARS-CoV-2","CAATATCTACACGATG",11,0.26,NA,NA,NA,NA,NA,NA,"stop","K56Q C61K C102W D112* Y143H",5
"lib1","SARS-CoV-2","CAATATCTACCGAGAC",5,100.75,10.38,-0.38,0.05,2.81,1.04,0,">1 nonsynonymous","S29E F62Y T100Y S129G Y143F",5
"lib1","SARS-CoV-2","CAATATCTACTAGAGT",1,89.56,10.66,-0.1,0.1,2.81,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CAATATCTAGCACAAA",3,32.22,6,-4.76,1.73,1.5,1.06,0,">1 nonsynonymous","F12D P54S T63V A89L F156N",5
"lib1","SARS-CoV-2","CAATATCTGCTTAGTA",5,1.38,NA,NA,NA,NA,NA,NA,"stop","T3R F44Y T55E S69E Q84L L162*",6
"lib1","SARS-CoV-2","CAATATGAAACAAAGT",2,43.89,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N107Y N120P G155V",3
"lib1","SARS-CoV-2","CAATATGAAAGTCTAC",11,137.64,10.69,-0.07,0.05,2.91,1.05,0,">1 nonsynonymous","I2Y S184Q",2
"lib1","SARS-CoV-2","CAATATGAACTTATAT",5,51.6,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T100L N107F",2
"lib1","SARS-CoV-2","CAATATGACATATAGT",5,129.76,9.33,-1.44,0.11,1.91,1.12,0,">1 nonsynonymous","F12D K87H K198D",3
"lib1","SARS-CoV-2","CAATATGATAATTAAC",1,80.68,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","N4F V11T T55H A81F",4
"lib1","SARS-CoV-2","CAATATGCCCAACCCA",8,51.41,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","E10A N92V",2
"lib1","SARS-CoV-2","CAATATGCCGTCAAAT",6,1.5,NA,NA,NA,NA,NA,NA,"stop","N64L Q84* F167L",3
"lib1","SARS-CoV-2","CAATATGGAGCTTATA",1,26.79,10.07,-0.7,0.2,1.73,1.2,0.02,">1 nonsynonymous","A22G S69F",2
"lib1","SARS-CoV-2","CAATATGGCCCGTATC",2,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G L57I",2
"lib1","SARS-CoV-2","CAATATGGCGCATTGG",7,51.32,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W106D K114A N157L",3
"lib1","SARS-CoV-2","CAATATGTACGACCAG",2,40.84,9.79,-0.97,0.08,2.69,1.07,0,">1 nonsynonymous","A42Q N107A G152S",3
"lib1","SARS-CoV-2","CAATATGTATCCCAAA",9,98.36,10.69,-0.07,0.05,2.97,1.01,0,">1 nonsynonymous","D97N I104M",2
"lib1","SARS-CoV-2","CAATATGTATGCCACT",5,110.18,9.71,-1.05,0.04,2.87,1.06,0,">1 nonsynonymous","G152L F156S",2
"lib1","SARS-CoV-2","CAATATGTCTAGTCAA",4,9.58,10.71,-0.06,0.08,2.83,1.15,0,"1 nonsynonymous","A192C",1
"lib1","SARS-CoV-2","CAATATGTGACAAATT",2,88.43,10.81,0.05,0.09,2.89,1.05,0,">1 nonsynonymous","I142V P197T",2
"lib1","SARS-CoV-2","CAATATGTGAGCAGTA",2,27.99,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N107V Y123K P177F",3
"lib1","SARS-CoV-2","CAATATGTGCCTCCGT",1,2.05,NA,NA,NA,NA,NA,NA,"stop","D34E A81L N107V Y121P I138*",5
"lib1","SARS-CoV-2","CAATATTAAGTGCAGT",12,172.56,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C158D A190I K198Q",3
"lib1","SARS-CoV-2","CAATATTACAGAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106S A145S",2
"lib1","SARS-CoV-2","CAATATTACAGTTCTA",2,27.99,9.33,-1.44,0.17,1.67,1.15,0.01,">1 nonsynonymous","K56S W106G",2
"lib1","SARS-CoV-2","CAATATTACGTCGGTC",3,27.76,10.73,-0.04,0.05,2.93,1.03,0,">1 nonsynonymous","T46I C61K",2
"lib1","SARS-CoV-2","CAATATTAGTACTTAA",3,60.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36E R78C V115E R124F",4
"lib1","SARS-CoV-2","CAATATTATATTACTA",3,16.7,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","N13G Y50C S129E N157Y T201S",5
"lib1","SARS-CoV-2","CAATATTCAAACAACG",1,34.17,10.73,-0.04,0.21,2.65,1.05,0.01,"1 nonsynonymous","N4S",1
"lib1","SARS-CoV-2","CAATATTCTCCTAAAA",16,195.69,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S43Y D68V D90H G152P V173K",5
"lib1","SARS-CoV-2","CAATATTGAAGGTTAC",4,55.52,9.91,-0.85,0.05,2.84,1.06,0,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","CAATATTGAATAGTGT",3,0.24,NA,NA,NA,NA,NA,NA,"stop","R27* D90V Y165Q",3
"lib1","SARS-CoV-2","CAATATTGCAACTAAT",1,12.97,6.92,-3.85,1.06,1.5,1.17,0.06,">1 nonsynonymous","L57R S113V T201S",3
"lib1","SARS-CoV-2","CAATATTGCTCACAGC",3,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A T140I L183D",3
"lib1","SARS-CoV-2","CAATATTTAAGACACA",3,41.39,9.19,-1.57,0.27,1.5,1.24,0.03,">1 nonsynonymous","S45R K56F E135H",3
"lib1","SARS-CoV-2","CAATATTTGATACCAG",2,90.84,10.2,-0.57,0.04,2.69,1.06,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CAATCAAAAAACCCCT",2,40.84,8.23,-2.54,0.27,1.85,1.16,0.03,">1 nonsynonymous","A22E C61V A81V Y119V S200I",5
"lib1","SARS-CoV-2","CAATCAAAAACAGGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2F S36* G51D C195F",4
"lib1","SARS-CoV-2","CAATCAAAAAGACTCT",9,210.81,10.78,0.01,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCAAAAGATTAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G F12H S41I C150S F156W",5
"lib1","SARS-CoV-2","CAATCAAAATACCAAC",3,1.17,NA,NA,NA,NA,NA,NA,"stop","L38* F44P R78I F156M G196N",5
"lib1","SARS-CoV-2","CAATCAAACAGATCAA",3,77.53,10.66,-0.11,0.07,2.91,1.08,0,"1 nonsynonymous","K199W",1
"lib1","SARS-CoV-2","CAATCAAAGCCCTACT",1,0.45,NA,NA,NA,NA,NA,NA,"stop","C31A N130* F156A",3
"lib1","SARS-CoV-2","CAATCAAAGGATCTGC",4,16.52,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","S41G G116W R136D T148S F156T",5
"lib1","SARS-CoV-2","CAATCAAATAGGTTGC",1,10.62,10.09,-0.68,0.28,2.42,1,0.02,">1 nonsynonymous","V71L D75M",2
"lib1","SARS-CoV-2","CAATCAAATCCATAGC",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y N92G G166L",3
"lib1","SARS-CoV-2","CAATCAAATTCATCCT",1,22.42,10.69,-0.08,0.05,2.95,1,0,">1 nonsynonymous","N58E E141V",2
"lib1","SARS-CoV-2","CAATCAACAATAGGGG",5,3.2,NA,NA,NA,NA,NA,NA,"stop","Y121P R127S T201*",3
"lib1","SARS-CoV-2","CAATCAACTCCTATGG",1,36.67,10.79,0.03,0.08,2.87,1.05,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","CAATCAAGAACTGGCA",6,90.66,10.76,0,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCAAGTAGAGCTG",1,29.34,7.17,-3.6,0.34,1.61,1.22,0.02,">1 nonsynonymous","S29G Q84R G172A",3
"lib1","SARS-CoV-2","CAATCAAGTGCCAAGA",1,21.21,10.87,0.1,0.09,2.74,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCAAGTTAATGAG",5,62.68,8.96,-1.81,0.1,2.68,1.16,0,"1 nonsynonymous","T170V",1
"lib1","SARS-CoV-2","CAATCAAGTTGAAGAA",8,133.27,10.78,0.01,0.06,2.87,1.11,0,"1 nonsynonymous","S36T",1
"lib1","SARS-CoV-2","CAATCAATACACGAAA",1,17.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G155C F167N",2
"lib1","SARS-CoV-2","CAATCAATAGCGCCTG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81C N157F",2
"lib1","SARS-CoV-2","CAATCAATATAAATTT",2,45.87,10.2,-0.56,0.06,2.82,1.09,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","CAATCAATCAATTTAG",2,71.12,6.47,-4.29,0.54,1.5,1.2,0.03,">1 nonsynonymous","S19F V32S",2
"lib1","SARS-CoV-2","CAATCAATGCATTCAA",1,124.64,10.71,-0.05,0.04,2.93,1.05,0,">1 nonsynonymous","I2V C61K",2
"lib1","SARS-CoV-2","CAATCAATTGCACTTA",2,38.01,10.7,-0.06,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCACACACGAACG",5,43.36,10.81,0.04,0.07,2.94,1.01,0,"1 nonsynonymous","V115A",1
"lib1","SARS-CoV-2","CAATCACCCATGTGAC",3,80.55,10.71,-0.05,0.05,2.94,1.04,0,">1 nonsynonymous","V37Q I104M",2
"lib1","SARS-CoV-2","CAATCACCCTTGTTAG",3,110.8,9.61,-1.16,0.06,2.75,1.07,0,">1 nonsynonymous","T55S N64W N118Y",3
"lib1","SARS-CoV-2","CAATCACCGAAAAAAA",4,5.14,NA,NA,NA,NA,NA,NA,"stop","I2G I104* Q168G",3
"lib1","SARS-CoV-2","CAATCACGACAGCTGT",9,28.15,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I2C N13I I104C Y119P K128N",5
"lib1","SARS-CoV-2","CAATCACGCAGGCACA",2,0.36,NA,NA,NA,NA,NA,NA,"stop","N40S Y91I N107V Y121* S139* T148M",6
"lib1","SARS-CoV-2","CAATCACGGATTGATA",2,4.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CAATCACTACTCGAAA",3,37.17,9.91,-0.86,0.12,1.92,1.1,0,">1 nonsynonymous","F99L N110K P169R",3
"lib1","SARS-CoV-2","CAATCACTGAGCGGCT",7,42.59,9.39,-1.37,0.32,1.5,1,0.06,">1 nonsynonymous","N13H D90F G146H T201P",4
"lib1","SARS-CoV-2","CAATCACTTAAAGAGT",4,7.85,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","T15Q Y50L K56P Y66P F160P",5
"lib1","SARS-CoV-2","CAATCACTTTTGTTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2S S43W E76T F134*",4
"lib1","SARS-CoV-2","CAATCAGAACACACCA",5,149.77,10.08,-0.69,0.05,2.82,1,0,">1 nonsynonymous","S29T S41I P149V P169T",4
"lib1","SARS-CoV-2","CAATCAGACAAACATA",1,8.29,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","G74C Y165D",2
"lib1","SARS-CoV-2","CAATCAGAGGAACGCA",1,22.3,10.72,-0.05,0.04,2.99,1,0,">1 nonsynonymous","A145S K198G",2
"lib1","SARS-CoV-2","CAATCAGAGGACCCAA",8,27.31,6,-4.76,1.03,1.5,1.13,0.01,">1 nonsynonymous","V77Q K94Y",2
"lib1","SARS-CoV-2","CAATCAGATTTAAAAC",1,49.02,10.39,-0.37,0.07,2.76,1,0,"1 nonsynonymous","F134K",1
"lib1","SARS-CoV-2","CAATCAGCCAATTGCT",11,228.49,10.21,-0.55,0.04,2.88,1.03,0,">1 nonsynonymous","T3S Y123Q",2
"lib1","SARS-CoV-2","CAATCAGGATGGTGGG",8,60.2,6.15,-4.62,0.62,1.5,1.14,0.01,">1 nonsynonymous","Y91P D112S",2
"lib1","SARS-CoV-2","CAATCAGGCGTACCTT",1,30.56,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","D59L V65A L95H I138K K198S",5
"lib1","SARS-CoV-2","CAATCAGGTCATTTGA",1,5.61,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G9E V32S G74P N118V R127S V173F",6
"lib1","SARS-CoV-2","CAATCATAAACTATAC",4,48.5,10.09,-0.67,0.1,1.91,1.1,0,">1 nonsynonymous","S29R G51I Q163A",3
"lib1","SARS-CoV-2","CAATCATAATAAAGGG",6,2.35,NA,NA,NA,NA,NA,NA,"stop","S113* G152S F185Y",3
"lib1","SARS-CoV-2","CAATCATACATTCATA",7,55.86,10.55,-0.22,0.07,2.98,1,0,"1 nonsynonymous","I138P",1
"lib1","SARS-CoV-2","CAATCATACGTTTGGT",1,1.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116N",1
"lib1","SARS-CoV-2","CAATCATATCTGATCG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","G9* R136S",2
"lib1","SARS-CoV-2","CAATCATATTATAACA",6,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82A R127W",2
"lib1","SARS-CoV-2","CAATCATCTACAGAGA",10,93.04,6,-4.76,0.93,1.5,1.18,0.01,">1 nonsynonymous","S36G N107W P133H",3
"lib1","SARS-CoV-2","CAATCATCTTACACAA",2,28.44,10.69,-0.08,0.1,2.73,1.15,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","CAATCATTAATGAAAG",3,24.46,10.83,0.07,0.09,2.95,1.04,0,"1 nonsynonymous","F160Y",1
"lib1","SARS-CoV-2","CAATCATTCCGACCAT",8,120.55,9.98,-0.78,0.06,2.83,1.03,0,">1 nonsynonymous","N40R T170K",2
"lib1","SARS-CoV-2","CAATCATTGTCACGGT",1,59.49,9.55,-1.21,0.07,2.91,1.07,0,"1 nonsynonymous","T170E",1
"lib1","SARS-CoV-2","CAATCCAAAAACATTT",3,98.27,10.58,-0.18,0.05,2.88,1.07,0,">1 nonsynonymous","L60Y E141P",2
"lib1","SARS-CoV-2","CAATCCAAGCAAGGGG",1,31.7,10.26,-0.5,0.1,2.81,1.08,0.01,">1 nonsynonymous","N1K D75E P149I",3
"lib1","SARS-CoV-2","CAATCCAATAATCAAA",2,22.12,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F8G V37S N40I D68K",4
"lib1","SARS-CoV-2","CAATCCACAGTTTCTA",7,84.31,8,-2.76,0.11,2.1,1.1,0,"1 nonsynonymous","Y159C",1
"lib1","SARS-CoV-2","CAATCCACATAAGCGG",5,55.36,10.64,-0.12,0.05,2.87,1.11,0,">1 nonsynonymous","Q84N I104F",2
"lib1","SARS-CoV-2","CAATCCACCCCCCACC",2,18.12,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A81P K114R",2
"lib1","SARS-CoV-2","CAATCCACCGAGAAGC",3,34.7,9.65,-1.11,0.11,2.07,1.05,0,">1 nonsynonymous","T15G L57N S129T",3
"lib1","SARS-CoV-2","CAATCCAGGGAACAGA",1,50.31,10.83,0.07,0.08,2.92,1.05,0,">1 nonsynonymous","L122M Q163R",2
"lib1","SARS-CoV-2","CAATCCAGGGACTTTA",6,40.51,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Q79L L95H T140G",3
"lib1","SARS-CoV-2","CAATCCAGTTTACCAC",7,112.22,10.46,-0.3,0.04,2.78,1.07,0,">1 nonsynonymous","Q84Y V173R",2
"lib1","SARS-CoV-2","CAATCCATCAGACGAA",2,12.27,9.96,-0.8,0.15,2.71,1,0.01,">1 nonsynonymous","D98Q G174F",2
"lib1","SARS-CoV-2","CAATCCATGAAATAGC",2,10.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F70S Y121I Y175V",3
"lib1","SARS-CoV-2","CAATCCATTATGAAAG",3,0.2,NA,NA,NA,NA,NA,NA,"stop","C61* I80L L111N Y119I",4
"lib1","SARS-CoV-2","CAATCCATTGGTGGCT",1,6.62,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","S45Q P54L D59L V65T P169E",5
"lib1","SARS-CoV-2","CAATCCCAAAATTACA",5,37.39,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F8S L95P",2
"lib1","SARS-CoV-2","CAATCCCACACAAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* R78L",2
"lib1","SARS-CoV-2","CAATCCCATGACACAG",6,3.32,NA,NA,NA,NA,NA,NA,"stop","V52* F99I K128P",3
"lib1","SARS-CoV-2","CAATCCCATTCCCAAC",3,11.29,9.86,-0.91,0.17,1.91,1.03,0.02,">1 nonsynonymous","N4I Y123T",2
"lib1","SARS-CoV-2","CAATCCCCCTAAATAC",2,18.97,10.71,-0.05,0.11,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCCCTATGAGATA",7,86.63,6,-4.76,1.35,1.5,1.23,0.01,">1 nonsynonymous","N40W K56T K94Y N120M",4
"lib1","SARS-CoV-2","CAATCCCTCGGTAACA",7,52.35,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D68R D97L I142P",3
"lib1","SARS-CoV-2","CAATCCCTTTAGCATT",3,42.16,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S43Q C49R T63I F70C P149L F167M",6
"lib1","SARS-CoV-2","CAATCCCTTTATACAG",2,50.75,10.51,-0.26,0.08,2.98,1,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CAATCCGCTACCCCCA",4,76.74,9.42,-1.35,0.19,1.75,1.18,0.02,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","CAATCCGTTGCTGATA",1,12.9,6,-4.76,1.44,3,1.07,0.01,">1 nonsynonymous","Y93A E135S Q168V",3
"lib1","SARS-CoV-2","CAATCCTAAGGAAATC",1,29.52,6,-4.76,2,3,1.13,0,">1 nonsynonymous","L95G K114N N157V",3
"lib1","SARS-CoV-2","CAATCCTCAAGGCCAT",3,1,NA,NA,NA,NA,NA,NA,"stop","V37M C61* L95R G146M V173A",5
"lib1","SARS-CoV-2","CAATCCTGTTCTATCC",3,55.98,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R25E V37D S45L T140A K198S",5
"lib1","SARS-CoV-2","CAATCCTTACGAGGCT",1,35.31,9.6,-1.17,0.16,1.87,1.09,0.01,">1 nonsynonymous","R25M Y35F",2
"lib1","SARS-CoV-2","CAATCGAAGGTCAAGC",6,3.89,NA,NA,NA,NA,NA,NA,"stop","N40E Y123* S129P",3
"lib1","SARS-CoV-2","CAATCGAATATTGGAT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","N4Q A42N E76*",3
"lib1","SARS-CoV-2","CAATCGAATGAGCAGC",9,157.36,10.74,-0.03,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCGACCCTGGGTT",6,69.14,10.04,-0.72,0.07,2.22,1.08,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","CAATCGACTAAGACGT",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T A33Y P96Y D112R S129I L183P",6
"lib1","SARS-CoV-2","CAATCGATGCTCATGT",1,69.25,10.62,-0.15,0.05,2.86,1.05,0,"1 nonsynonymous","R78T",1
"lib1","SARS-CoV-2","CAATCGATTATATGAC",5,44.26,6.03,-4.73,1.26,1.5,1.25,0.03,">1 nonsynonymous","A67R Q144G",2
"lib1","SARS-CoV-2","CAATCGCAGCCAATGA",9,98.09,10.67,-0.09,0.03,2.95,1.04,0,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","CAATCGCTATACTCTT",3,76.18,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86L Y119G",2
"lib1","SARS-CoV-2","CAATCGCTGACCTATA",8,121.56,10.58,-0.19,0.04,2.87,1.05,0,"1 nonsynonymous","Y21V",1
"lib1","SARS-CoV-2","CAATCGGCAAATCTGC",7,40.93,9.54,-1.23,0.2,1.7,1.16,0.01,">1 nonsynonymous","T3L S43V T100N N120I Q144T",5
"lib1","SARS-CoV-2","CAATCGGCGTTGGGAC",5,1.86,NA,NA,NA,NA,NA,NA,"stop","S45G L57M T63* K94T L131S",5
"lib1","SARS-CoV-2","CAATCGGCTAAATACG",2,89.85,10.64,-0.12,0.1,2.8,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CAATCGGGTTCGTTTA",5,17.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56W Y91L Y123N Q144Y F156S",5
"lib1","SARS-CoV-2","CAATCGGTCAAGAAAA",2,82.79,10.12,-0.65,0.07,2.84,1.03,0,">1 nonsynonymous","C6M F160N",2
"lib1","SARS-CoV-2","CAATCGTATACTACGC",5,136.88,10.71,-0.05,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATCTAAAAGGGTCT",2,54.49,8.56,-2.2,0.11,2.77,1.05,0,">1 nonsynonymous","F44S G117N",2
"lib1","SARS-CoV-2","CAATCTAAACACCGAC",3,20.17,6.58,-4.18,0.53,1.5,1.08,0.04,">1 nonsynonymous","C6L A42P C49T D68S G74D S147A",6
"lib1","SARS-CoV-2","CAATCTAAATTAACCT",15,102.82,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","E10K F99L C158E",3
"lib1","SARS-CoV-2","CAATCTAAGCATAGGT",6,0.7,NA,NA,NA,NA,NA,NA,"stop","V37F C61R N120*",3
"lib1","SARS-CoV-2","CAATCTAATAAGTCTT",7,38.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R27M N40Q C61K R127L N171C F185H",6
"lib1","SARS-CoV-2","CAATCTAATCCTAAAG",10,58.77,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","V37W F62G Y91W Y119L S139F F167V T201Q",7
"lib1","SARS-CoV-2","CAATCTACACGTACCG",1,12.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R16L A22I G83I D98H",4
"lib1","SARS-CoV-2","CAATCTACTAGTGTGA",3,10.29,9.58,-1.18,0.13,2.76,1,0.01,">1 nonsynonymous","I142T G174W",2
"lib1","SARS-CoV-2","CAATCTACTATAATCC",2,98.79,9.34,-1.42,0.16,1.5,1.14,0.01,">1 nonsynonymous","Y35E Y178S",2
"lib1","SARS-CoV-2","CAATCTACTATTAGTA",1,65.32,10.16,-0.6,0.06,2.85,1.05,0,">1 nonsynonymous","F44I C61F",2
"lib1","SARS-CoV-2","CAATCTAGTCGATTTG",1,27.15,9.58,-1.18,0.06,2.93,1,0,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","CAATCTATAGAAGATC",2,0.68,NA,NA,NA,NA,NA,NA,"stop","A42Y Y93* G174Y",3
"lib1","SARS-CoV-2","CAATCTATTATGCAAC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","F62T P177*",2
"lib1","SARS-CoV-2","CAATCTATTGAGTCTA",13,69.81,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N40I K94W S129D",3
"lib1","SARS-CoV-2","CAATCTCACAAAAAGG",5,18.25,10.83,0.06,0.12,2.71,1.14,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","CAATCTCACAGCCTGT",3,8.37,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F47S D112F",2
"lib1","SARS-CoV-2","CAATCTCACGTAATGT",2,2.47,NA,NA,NA,NA,NA,NA,"stop","E10* N58P N92H A105W P161R Q168V",6
"lib1","SARS-CoV-2","CAATCTCAGCTCTTAA",9,15.97,10.05,-0.71,0.18,2.02,1.06,0.02,">1 nonsynonymous","T15E Y91N T100N S129G",4
"lib1","SARS-CoV-2","CAATCTCATCGATTTC",2,49.03,10.36,-0.4,0.07,2.92,1,0,">1 nonsynonymous","Y91L V115S",2
"lib1","SARS-CoV-2","CAATCTCCACATAAAT",2,142.08,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10I R16Y Q176R",3
"lib1","SARS-CoV-2","CAATCTCCATACTGCA",3,26.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A105W N120L S139Y",3
"lib1","SARS-CoV-2","CAATCTCCCTCCTAAT",5,47.68,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","A89K F99A G155S",3
"lib1","SARS-CoV-2","CAATCTCGCACCCTTA",3,6.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C V11S S19V S43P D98V K132L",6
"lib1","SARS-CoV-2","CAATCTGAAATCATAT",2,18.13,9.94,-0.82,0.12,2.19,1.01,0.01,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","CAATCTGATTGGCTAA",2,126.96,10.41,-0.36,0.05,2.89,1.01,0,">1 nonsynonymous","V11L T46I",2
"lib1","SARS-CoV-2","CAATCTGGACGGTTTA",3,66.76,9.62,-1.14,0.13,1.86,1.11,0.01,">1 nonsynonymous","E10N Y35G F44I",3
"lib1","SARS-CoV-2","CAATCTGGGGTGCCCA",3,6.94,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6M G101N F156N",3
"lib1","SARS-CoV-2","CAATCTGTACCACGGT",3,5.34,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","K56Q G86P K128H R136L P197E",5
"lib1","SARS-CoV-2","CAATCTTAAACTAAGC",1,1.23,NA,NA,NA,NA,NA,NA,"stop","A33H F44Q G51M C61N G101*",5
"lib1","SARS-CoV-2","CAATCTTAAACTTACC",1,10.59,6.35,-4.41,0.74,1.5,1.09,0.04,">1 nonsynonymous","C6Y V37S V103Y P169L",4
"lib1","SARS-CoV-2","CAATCTTAACAAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N107* Y121M",2
"lib1","SARS-CoV-2","CAATCTTAAGTAAGAA",3,29.85,9.12,-1.65,0.25,1.61,1.2,0.02,">1 nonsynonymous","T3W D90E Y178S T201E",4
"lib1","SARS-CoV-2","CAATCTTTGTTGAATA",3,27.5,10.45,-0.31,0.1,2.94,1,0,">1 nonsynonymous","F12L K56T",2
"lib1","SARS-CoV-2","CAATGAAAAAACCTAA",7,67.29,10.79,0.03,0.06,2.86,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CAATGAAAAACTCTAA",2,80.77,10.26,-0.51,0.06,2.89,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","CAATGAAAATCCTACA",6,140.2,10.73,-0.04,0.03,2.93,1.04,0,"1 nonsynonymous","N4H",1
"lib1","SARS-CoV-2","CAATGAAACACTAATT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76G D98M W106P",3
"lib1","SARS-CoV-2","CAATGAAACGAGTAAT",1,52.64,6,-4.76,2,3,1.2,0,">1 nonsynonymous","K48F A81I S108A R124I G174R",5
"lib1","SARS-CoV-2","CAATGAAAGATTAGAA",10,675.03,8.4,-2.37,0.11,2.35,1.06,0,">1 nonsynonymous","F62W S113P",2
"lib1","SARS-CoV-2","CAATGAACACAAAGCA",7,229.97,9.89,-0.87,0.09,2.37,1.05,0,">1 nonsynonymous","S36G A105M",2
"lib1","SARS-CoV-2","CAATGAACCGCTAGAG",4,79.64,10.13,-0.63,0.07,2.72,1.04,0,">1 nonsynonymous","I28V A42Y T100R G152A",4
"lib1","SARS-CoV-2","CAATGAACTAGCACCA",2,14.89,6.75,-4.02,0.3,1.5,1.07,0.03,">1 nonsynonymous","K87E V103L",2
"lib1","SARS-CoV-2","CAATGAACTATGAAAT",7,27.46,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G83F V103R",2
"lib1","SARS-CoV-2","CAATGAACTTCTAACC",8,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T D112R V173P",3
"lib1","SARS-CoV-2","CAATGAAGCTTTCGGA",4,65.15,10.77,0.01,0.06,2.91,1.04,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","CAATGAAGTTATATGA",5,4.29,NA,NA,NA,NA,NA,NA,"stop","C6N N118* E141P",3
"lib1","SARS-CoV-2","CAATGAATAAACGTCA",1,32.3,10.5,-0.26,0.12,2.74,1.13,0.01,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","CAATGAATATTGCACA",3,22.13,6.22,-4.55,0.58,1.5,1.1,0.02,">1 nonsynonymous","A105P S113R A190S",3
"lib1","SARS-CoV-2","CAATGAATCCTGTTAT",6,126.34,10.77,0,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATGAATGAAACTCA",5,56.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A V37L D90I S129D",4
"lib1","SARS-CoV-2","CAATGAATGCACCCCC",4,38.68,10.06,-0.7,0.12,2.1,1.05,0.01,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","CAATGAATTAGTAAGC",1,90.79,10.66,-0.1,0.07,2.96,1.02,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","CAATGACAAGTACACC",2,36.22,9.07,-1.7,0.2,1.54,1.16,0.02,">1 nonsynonymous","Y35I N40D P96L",3
"lib1","SARS-CoV-2","CAATGACACAAGGGAA",3,70.71,10.47,-0.29,0.06,2.81,1.07,0,">1 nonsynonymous","P7T S139R T201C",3
"lib1","SARS-CoV-2","CAATGACACGCTCCCA",7,112.59,10.76,-0.01,0.05,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATGACCACGACTCT",9,1.21,NA,NA,NA,NA,NA,NA,"stop","V11A P82K Y119W E135*",4
"lib1","SARS-CoV-2","CAATGACCAGACGCGG",1,0.64,NA,NA,NA,NA,NA,NA,"stop","F17L R25Y Y39*",3
"lib1","SARS-CoV-2","CAATGACCATGAACAA",9,149.89,8.6,-2.16,0.09,2.64,1.11,0,">1 nonsynonymous","I2V D98T Y119V S147C",4
"lib1","SARS-CoV-2","CAATGACCTAGACAGT",2,20.27,10.72,-0.04,0.11,2.85,1.1,0.01,"1 nonsynonymous","S29H",1
"lib1","SARS-CoV-2","CAATGACCTTATTCTA",4,76.25,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F62P I88C G152V",3
"lib1","SARS-CoV-2","CAATGACTCTGACTAA",2,30.85,8.68,-2.08,0.27,1.5,1,0.03,">1 nonsynonymous","Y50S N130I P149L T201K",4
"lib1","SARS-CoV-2","CAATGAGACATTCATT",3,68.23,8.18,-2.58,0.31,1.5,1.01,0.03,">1 nonsynonymous","L57P Q84H Y119T",3
"lib1","SARS-CoV-2","CAATGAGAGAGGCCTA",2,19.35,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L5R C49F G83H D97V N157L",5
"lib1","SARS-CoV-2","CAATGAGCAAACCGAG",1,49,8.66,-2.11,0.08,2.73,1.06,0,">1 nonsynonymous","K114N N130R G146K",3
"lib1","SARS-CoV-2","CAATGAGCTTAATTAG",3,21.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G A105I Y123S G152V",4
"lib1","SARS-CoV-2","CAATGAGTCAAATCTT",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q Y93N P149T",3
"lib1","SARS-CoV-2","CAATGAGTCCCGTAAA",11,130.49,10.8,0.04,0.07,2.92,1.01,0,"1 nonsynonymous","K48Q",1
"lib1","SARS-CoV-2","CAATGATAATGCACTA",3,43.6,8.66,-2.11,0.13,2.5,1.09,0.01,">1 nonsynonymous","G9I G117D K128D",3
"lib1","SARS-CoV-2","CAATGATAGTTTCACT",5,60.71,10.64,-0.13,0.08,2.89,1.06,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","CAATGATATGATCTTA",2,0.25,NA,NA,NA,NA,NA,NA,"stop","I2Y G9L G51*",3
"lib1","SARS-CoV-2","CAATGATCACGCTCTC",9,68.61,6.78,-3.98,0.31,1.5,1.16,0.01,">1 nonsynonymous","N64C Y121D",2
"lib1","SARS-CoV-2","CAATGATCATAAGTGT",2,68.28,8.2,-2.57,0.18,2.3,1.15,0.01,">1 nonsynonymous","C61N L125K N130W",3
"lib1","SARS-CoV-2","CAATGATCGATGACCT",8,0,NA,NA,NA,NA,NA,NA,"stop","Y93S K114D L131* P149L",4
"lib1","SARS-CoV-2","CAATGATCTCATGAAA",9,75.86,6,-4.76,0.94,3,1.12,0,">1 nonsynonymous","A33R K56F N107T",3
"lib1","SARS-CoV-2","CAATGATCTTCTAACT",5,42.23,10.38,-0.39,0.06,2.99,1,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","CAATGATTGTGACCGA",2,13.47,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V37W F99T V182I",3
"lib1","SARS-CoV-2","CAATGATTTTACGAAG",2,17.84,8.21,-2.56,0.11,2.07,1.08,0.01,">1 nonsynonymous","E10V A42C R136I F160W",4
"lib1","SARS-CoV-2","CAATGCAACAATCATA",5,158.41,10.25,-0.51,0.07,2.6,1,0,">1 nonsynonymous","S53W N64F K128D",3
"lib1","SARS-CoV-2","CAATGCAAGATTAACC",10,345,9.62,-1.14,0.05,2.87,1.05,0,">1 nonsynonymous","G116W T170G",2
"lib1","SARS-CoV-2","CAATGCAATTTCGTTC",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R S19P E76A Y93A N120H S139D G146C R179V",8
"lib1","SARS-CoV-2","CAATGCACTCTTCCAA",11,60.78,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R73W I88A",2
"lib1","SARS-CoV-2","CAATGCAGAAATAGTT",9,90.12,8.66,-2.11,0.15,1.91,1.19,0.01,">1 nonsynonymous","G83M D97Q L111F G174Y",4
"lib1","SARS-CoV-2","CAATGCAGGTAAGGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","L60A P96Q K114V Y119I R136G Q168*",6
"lib1","SARS-CoV-2","CAATGCATAAAAACCG",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A V182D",2
"lib1","SARS-CoV-2","CAATGCATAACTACGC",4,35.88,9.6,-1.16,0.05,2.95,1.04,0,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","CAATGCATACAATCAG",9,40.35,10.25,-0.52,0.04,2.93,1.01,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","CAATGCATATAAGCCA",2,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47A V77Q Q144P",3
"lib1","SARS-CoV-2","CAATGCATCAAACGGG",3,57.99,10.21,-0.55,0.09,2.66,1,0,">1 nonsynonymous","G9A D97N P133N T201V",4
"lib1","SARS-CoV-2","CAATGCATCTTATGCT",2,58.18,10.69,-0.07,0.08,2.9,1.07,0,"1 nonsynonymous","T3H",1
"lib1","SARS-CoV-2","CAATGCATTCTAAAAC",2,25.66,10.65,-0.11,0.11,2.88,1.05,0.01,"1 nonsynonymous","K114V",1
"lib1","SARS-CoV-2","CAATGCATTTAAAGTA",1,15.32,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G83L P96W F99C G174R",4
"lib1","SARS-CoV-2","CAATGCCAATCCACGT",2,6.57,8.18,-2.58,0.39,1.9,1.23,0.03,">1 nonsynonymous","S139I S164G V173P S200L",4
"lib1","SARS-CoV-2","CAATGCCAGCGGACAA",2,6.51,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S36A V52R A89V V103Q",4
"lib1","SARS-CoV-2","CAATGCCGAGTGGCGG",2,27.88,10.21,-0.55,0.07,2.79,1.02,0,">1 nonsynonymous","S41M L57S",2
"lib1","SARS-CoV-2","CAATGCCTTTTCCGAG",4,17.38,7.39,-3.37,0.26,1.8,1.16,0.02,">1 nonsynonymous","A14T N107S P169Q",3
"lib1","SARS-CoV-2","CAATGCGAATGGATCC",10,82.24,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37S Y93P S108D E141M",4
"lib1","SARS-CoV-2","CAATGCGAGACTAATC",1,12.85,6.89,-3.88,0.73,1.5,1.43,0.06,">1 nonsynonymous","F44N Y91I T140G",3
"lib1","SARS-CoV-2","CAATGCGATAACTCCA",2,10.46,10.25,-0.51,0.19,2.41,1,0.02,">1 nonsynonymous","W106T I142L",2
"lib1","SARS-CoV-2","CAATGCGATGAAAGTA",1,22.17,9.12,-1.64,0.13,2.8,1.1,0.01,">1 nonsynonymous","N118H P169R",2
"lib1","SARS-CoV-2","CAATGCGCAACTAGAA",14,23.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3M N13Y S36C L60N",4
"lib1","SARS-CoV-2","CAATGCGCGTATGCGA",1,9.63,10.55,-0.21,0.11,2.82,1.06,0.01,">1 nonsynonymous","F47Y T201I",2
"lib1","SARS-CoV-2","CAATGCGCTGAATCCC",1,82.97,10.65,-0.11,0.05,2.83,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","CAATGCGGAAGGAGGG",6,64.06,6.32,-4.45,0.56,1.5,1.19,0.02,">1 nonsynonymous","Y91V S113N",2
"lib1","SARS-CoV-2","CAATGCGTCCTTCCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","T63D N107I Y119F D137* Y175D K198I",6
"lib1","SARS-CoV-2","CAATGCGTTCAAAAAA",3,15,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4Y V20L D68L S113G Y119L S147Y G152I P169Y",8
"lib1","SARS-CoV-2","CAATGCTATAAAATCA",4,11.09,10.79,0.02,0.11,2.76,1.14,0,">1 nonsynonymous","T3K P149V",2
"lib1","SARS-CoV-2","CAATGCTATGAGACTT",2,54.39,6.52,-4.24,0.56,1.5,1.11,0.03,">1 nonsynonymous","C102L P149D G155L Y175T S200Y",5
"lib1","SARS-CoV-2","CAATGCTCTCATACAC",6,29.48,9.81,-0.96,0.36,1.5,1,0.06,">1 nonsynonymous","K87A D90N P133L G174S T201L",5
"lib1","SARS-CoV-2","CAATGCTGAGACATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K K128G P197T",3
"lib1","SARS-CoV-2","CAATGCTTACAAATGA",3,9.09,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","S19W V37D S139L",3
"lib1","SARS-CoV-2","CAATGGAAAACACATA",3,64.04,10.77,0.01,0.08,2.88,1.06,0,"1 nonsynonymous","S53A",1
"lib1","SARS-CoV-2","CAATGGAAATCAAAGT",4,52.06,10.66,-0.11,0.07,2.89,1.07,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","CAATGGAAGTAATGGG",1,7.02,10.39,-0.37,0.13,2.66,1.19,0.01,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","CAATGGACACTAACAA",1,38.3,8.94,-1.82,0.27,1.5,1.03,0.03,">1 nonsynonymous","L60T K94F",2
"lib1","SARS-CoV-2","CAATGGAGTAAATAAC",4,68.04,10.64,-0.12,0.05,2.88,1.03,0,">1 nonsynonymous","S41W E135Q",2
"lib1","SARS-CoV-2","CAATGGATCTCTCACG",4,0.53,NA,NA,NA,NA,NA,NA,"stop","S19A K26*",2
"lib1","SARS-CoV-2","CAATGGATTCGCGCTA",8,93.49,10.78,0.02,0.06,2.87,1.08,0,"1 nonsynonymous","L38I",1
"lib1","SARS-CoV-2","CAATGGCAGTGGAATC",6,0.51,NA,NA,NA,NA,NA,NA,"stop","I2M N30A P96* L122A",4
"lib1","SARS-CoV-2","CAATGGCCAAATTAGA",3,0.63,NA,NA,NA,NA,NA,NA,"stop","I2A I80* A105S L162C Y175V",5
"lib1","SARS-CoV-2","CAATGGCGGGTAATAG",1,8.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2C V11I N30I Y50S K56S Y93K Y121S G152C P197S",9
"lib1","SARS-CoV-2","CAATGGCTAAGAAAAA",5,82.85,10.76,0,0.03,2.95,1,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","CAATGGCTAGCATGAC",2,0.75,NA,NA,NA,NA,NA,NA,"stop","K56* G101V N107P G174R",4
"lib1","SARS-CoV-2","CAATGGCTTTTTACTA",5,143.75,9.04,-1.72,0.06,2.83,1.09,0,">1 nonsynonymous","L60Q G117L T201N",3
"lib1","SARS-CoV-2","CAATGGGAAACTGTCT",1,16.5,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A81V T85N N92K G152L",4
"lib1","SARS-CoV-2","CAATGGGATGTTTGCG",1,17.41,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S43D D68R R136I",3
"lib1","SARS-CoV-2","CAATGGGCACAACTTA",7,278.5,6.75,-4.01,0.21,1.5,1.13,0.01,">1 nonsynonymous","N118M N157R T201H",3
"lib1","SARS-CoV-2","CAATGGGCCAGCTCTA",3,8.52,6,-4.76,2,1.5,1.32,0.08,">1 nonsynonymous","P7A N13D Y39S S53C D59W F70T N92L",7
"lib1","SARS-CoV-2","CAATGGGGTACTCACT",4,0.03,NA,NA,NA,NA,NA,NA,"stop","K48C S108F Y175*",3
"lib1","SARS-CoV-2","CAATGGGGTTGACGCA",4,14.81,10.58,-0.18,0.11,2.86,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAATGGGTCCTGCAAC",2,22.58,10.92,0.16,0.09,2.87,1.05,0,"1 nonsynonymous","T46R",1
"lib1","SARS-CoV-2","CAATGGGTCGACTAGA",5,64.58,10.68,-0.08,0.06,2.92,1.01,0,">1 nonsynonymous","Y35F S69M",2
"lib1","SARS-CoV-2","CAATGGGTCTATAAGG",2,8.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I Y178H",2
"lib1","SARS-CoV-2","CAATGGGTTATAATAT",4,9.59,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G86K G117Q V180D",3
"lib1","SARS-CoV-2","CAATGGTATACATGGA",3,109.62,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R16C P133L E141R Y165T",4
"lib1","SARS-CoV-2","CAATGGTCACCGCACC",3,70.31,8.75,-2.01,0.17,1.5,1.14,0.01,">1 nonsynonymous","G51C N58L L122V",3
"lib1","SARS-CoV-2","CAATGGTCGGTGCATG",5,53.72,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N30I F99T",2
"lib1","SARS-CoV-2","CAATGGTGCAGATGCA",2,20.39,10.4,-0.36,0.14,2.87,1,0.01,">1 nonsynonymous","Y119R P197D",2
"lib1","SARS-CoV-2","CAATGGTGTCAGACCC",3,85.52,10.2,-0.56,0.05,2.9,1,0,">1 nonsynonymous","S53L G146S Q168M",3
"lib1","SARS-CoV-2","CAATGGTTGCCTAACT",3,69.38,10.81,0.04,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATGTAATATAAATT",11,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L Q84V N130T C158H",4
"lib1","SARS-CoV-2","CAATGTACCGGAACTT",2,35.49,10.35,-0.42,0.07,2.93,1,0,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","CAATGTACGCATTTAA",4,119.79,8.49,-2.27,0.14,2.72,1.07,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","CAATGTACTAAGCACC",3,37.78,10.22,-0.55,0.09,2.96,1,0,"1 nonsynonymous","E154H",1
"lib1","SARS-CoV-2","CAATGTAGAGAGACAT",8,157.07,10.73,-0.03,0.08,2.88,1.05,0,"1 nonsynonymous","N110S",1
"lib1","SARS-CoV-2","CAATGTATAAAACTTT",5,122.68,9.36,-1.4,0.07,2.81,1.12,0,">1 nonsynonymous","T46Q Y119I",2
"lib1","SARS-CoV-2","CAATGTATAAGGTAAT",7,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128I F185C",2
"lib1","SARS-CoV-2","CAATGTATGAACATCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120A",1
"lib1","SARS-CoV-2","CAATGTCACTTTACAT",3,127.45,9.7,-1.07,0.07,2.67,1.08,0,">1 nonsynonymous","Q144F Y175F",2
"lib1","SARS-CoV-2","CAATGTCGCTCAACAT",12,0.13,NA,NA,NA,NA,NA,NA,"stop","I28K Y121* E141V",3
"lib1","SARS-CoV-2","CAATGTCGTAGTATAA",1,9.08,10.33,-0.43,0.13,2.69,1.09,0.01,"1 nonsynonymous","C49W",1
"lib1","SARS-CoV-2","CAATGTGAAATGCTAC",3,47.18,10.43,-0.34,0.02,2.84,1.1,0,">1 nonsynonymous","L5H F44L",2
"lib1","SARS-CoV-2","CAATGTGACGATAATT",7,104.24,8.74,-2.02,0.09,1.93,1.1,0,">1 nonsynonymous","N118L S184K S200T",3
"lib1","SARS-CoV-2","CAATGTGCCAATAAAC",5,86.62,6.35,-4.42,0.52,1.5,1.2,0.02,">1 nonsynonymous","G9P Y123G G152R G174A",4
"lib1","SARS-CoV-2","CAATGTGCTAGAAAGT",7,164.02,10.76,0,0.05,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATGTGCTAGTTTCC",1,115.44,10.9,0.14,0.07,2.87,1.05,0,"1 nonsynonymous","Y175W",1
"lib1","SARS-CoV-2","CAATGTGCTTATCCGT",4,7.06,NA,NA,NA,NA,NA,0.29,"1 nonsynonymous","V103K",1
"lib1","SARS-CoV-2","CAATGTGGATGCATAG",8,61.81,6.48,-4.29,0.42,1.5,1.13,0.02,">1 nonsynonymous","T3M P7N Y35H G101V W106A S129I E141D G152N",8
"lib1","SARS-CoV-2","CAATGTTAATCTAACA",2,48.54,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Q84W R179N",2
"lib1","SARS-CoV-2","CAATGTTACATTACAA",15,258.3,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I72V K87L G146C N157R Y178K S200R",6
"lib1","SARS-CoV-2","CAATGTTAGGGGGAGC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","G9* N40V G51L N110H Y143F T148V",6
"lib1","SARS-CoV-2","CAATGTTCCTAGATGC",1,8.58,11.09,0.33,0.21,2.86,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAATGTTCTGTGCTAA",4,117.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N118S F160S P169T P177N",4
"lib1","SARS-CoV-2","CAATGTTTTTCGTGAT",5,54.33,10.64,-0.12,0.07,2.9,1.07,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","CAATTAAAAAAGTGGA",4,8.05,10.84,0.08,0.12,2.85,1.11,0.01,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","CAATTAAAAACCCCTT",5,74.59,9.75,-1.01,0.06,2.73,1.06,0,">1 nonsynonymous","N118V S147I T201L",3
"lib1","SARS-CoV-2","CAATTAAAATAATTAC",4,8.79,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","E10Q F47L Y93V N130S",4
"lib1","SARS-CoV-2","CAATTAAACAGAGCCC",2,31.41,9.7,-1.06,0.18,2.24,1.11,0.02,">1 nonsynonymous","T15Y D34V",2
"lib1","SARS-CoV-2","CAATTAAACCGGATTG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","G9R E10* S19G V52N D68K",5
"lib1","SARS-CoV-2","CAATTAAACTCTTTCT",7,43.45,10.82,0.06,0.07,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTAAAGAGTAACC",1,0.79,NA,NA,NA,NA,NA,NA,"stop","T15D I80F D98A S129*",4
"lib1","SARS-CoV-2","CAATTAAAGGTCAACG",4,156.38,10.74,-0.03,0.07,2.92,1.05,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","CAATTAAATATACTAC",2,19.1,9.45,-1.31,0.18,1.5,1.06,0.02,">1 nonsynonymous","L5H P82L",2
"lib1","SARS-CoV-2","CAATTAAATATGCAAG",3,53.42,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8V D34F Y50S S113T",4
"lib1","SARS-CoV-2","CAATTAAATGAGAATA",4,0.31,NA,NA,NA,NA,NA,NA,"stop","L5* T55F K198M",3
"lib1","SARS-CoV-2","CAATTAAATGGACACA",2,37.68,6.96,-3.8,0.49,1.5,1.26,0.05,">1 nonsynonymous","L95P K199S",2
"lib1","SARS-CoV-2","CAATTAACAATCTATC",1,17.24,9.11,-1.65,0.19,1.65,1.21,0.02,">1 nonsynonymous","P7L N58V D90E K132N",4
"lib1","SARS-CoV-2","CAATTAAGAATACCAA",4,187.29,6,-4.76,1.74,1.5,1.14,0.01,">1 nonsynonymous","G117Q Q176P",2
"lib1","SARS-CoV-2","CAATTAAGATACTTCC",1,20.81,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D68R K114S",2
"lib1","SARS-CoV-2","CAATTAAGATGCATCA",1,17.36,10.76,0,0.06,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTAAGCACGAATA",7,93.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12R A18S Q84H F167E",4
"lib1","SARS-CoV-2","CAATTAAGCATACGCC",2,53.35,9.73,-1.04,0.07,2.85,1.07,0,">1 nonsynonymous","N171L T201D",2
"lib1","SARS-CoV-2","CAATTAAGCGTAACAC",2,21.55,10.5,-0.27,0.08,3,1.03,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","CAATTAAGGTGAATTA",3,47.49,10.62,-0.15,0.04,2.87,1.06,0,">1 nonsynonymous","C61T G116N",2
"lib1","SARS-CoV-2","CAATTAAGTAAATGCT",4,125.44,10.7,-0.06,0.04,2.95,1.01,0,">1 nonsynonymous","P7N K56A S164F",3
"lib1","SARS-CoV-2","CAATTAAGTAGAACAG",6,9,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9E Q84R A105F G172M",4
"lib1","SARS-CoV-2","CAATTAATGGACATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F Y66V T201K",3
"lib1","SARS-CoV-2","CAATTAATTGGCTATT",1,50.2,10.72,-0.04,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTAATTGGCTCGA",2,11.3,10.57,-0.19,0.14,2.85,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAATTAATTTGTTATG",1,33.65,10.76,0,0.1,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTACAAAGACACC",4,73.25,6,-4.76,1.56,1.5,1.25,0.02,">1 nonsynonymous","I2S L60N F134E G152V",4
"lib1","SARS-CoV-2","CAATTACAAAGGGATT",4,41.47,10.74,-0.02,0.07,2.84,1.05,0,"1 nonsynonymous","T63R",1
"lib1","SARS-CoV-2","CAATTACAACCATTGA",3,14.38,6,-4.76,2,3,1.1,0,">1 nonsynonymous","Y93T F99V E141V",3
"lib1","SARS-CoV-2","CAATTACACAAGGAAA",2,29.06,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9S P161L A192S",3
"lib1","SARS-CoV-2","CAATTACCAACTAACA",3,56.95,10.2,-0.56,0.12,2.61,1,0.01,">1 nonsynonymous","F62M K114Y Y178N T193Y V194G",5
"lib1","SARS-CoV-2","CAATTACCAAGCCAAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7* A14V",2
"lib1","SARS-CoV-2","CAATTACCCTGCATTT",2,54.11,8.41,-2.35,0.09,2.65,1.1,0,">1 nonsynonymous","T100M E141C G174I",3
"lib1","SARS-CoV-2","CAATTACCGACGATAC",2,35.01,10.02,-0.74,0.06,2.92,1.04,0,">1 nonsynonymous","L122T I142C",2
"lib1","SARS-CoV-2","CAATTACGCTACAAAT",5,51.51,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D59G G83E F99Y V115H T148K Q168L",6
"lib1","SARS-CoV-2","CAATTACGGACGCAGC",6,44.73,8.71,-2.06,0.07,2.57,1.04,0,">1 nonsynonymous","A105W Y119W",2
"lib1","SARS-CoV-2","CAATTACGGTATTCAA",3,6.91,9.1,-1.67,0.27,2.31,1.1,0.01,">1 nonsynonymous","W106S K128N",2
"lib1","SARS-CoV-2","CAATTACGTAAGAGAC",8,74.32,6,-4.76,2,3,1.22,0,">1 nonsynonymous","E10F N40C G83H D98M G117V E141M",6
"lib1","SARS-CoV-2","CAATTACGTGGAAGTG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","A14K D34I F62L F134*",4
"lib1","SARS-CoV-2","CAATTACTAGAATATG",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46G N110C E141H T170K",4
"lib1","SARS-CoV-2","CAATTACTAGGAGGCT",4,20.95,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6P R25A A33R",3
"lib1","SARS-CoV-2","CAATTACTGAAAATGC",2,21.29,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","V71L N110W R136P",3
"lib1","SARS-CoV-2","CAATTACTGACTAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M Y35S F156Y V173N",4
"lib1","SARS-CoV-2","CAATTACTTTAGTTTT",7,59.8,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","R25Y T85S Y93F P96T N118V E141M",6
"lib1","SARS-CoV-2","CAATTAGAAATAGCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4W F12Y V37* S43Y",4
"lib1","SARS-CoV-2","CAATTAGAAATCGCGC",4,12.04,10.62,-0.14,0.08,2.76,1.18,0,"1 nonsynonymous","Y175F",1
"lib1","SARS-CoV-2","CAATTAGAACAACTTA",2,1.5,NA,NA,NA,NA,NA,NA,"stop","L57F C102W S113*",3
"lib1","SARS-CoV-2","CAATTAGAATAAAACA",1,12.14,10.08,-0.68,0.12,1.98,1.01,0.02,">1 nonsynonymous","F44T D98Y",2
"lib1","SARS-CoV-2","CAATTAGATACCACCG",2,37.13,10.53,-0.24,0.11,2.73,1.17,0.01,">1 nonsynonymous","V37G T55S",2
"lib1","SARS-CoV-2","CAATTAGATTTTCCCG",4,116.96,10.72,-0.04,0.07,2.88,1.07,0,"1 nonsynonymous","V115K",1
"lib1","SARS-CoV-2","CAATTAGCCACCATCA",2,31.89,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W23V G166D",2
"lib1","SARS-CoV-2","CAATTAGGAAAGAAGT",4,49.03,10.08,-0.69,0.08,2.01,1.11,0,">1 nonsynonymous","I28T T55L",2
"lib1","SARS-CoV-2","CAATTAGGAAGAGAAG",12,30.35,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","N1Q D34V W106D",3
"lib1","SARS-CoV-2","CAATTAGGAGTAGACA",3,39.73,8.59,-2.17,0.28,1.5,1.16,0.03,">1 nonsynonymous","R27N F62S G86N",3
"lib1","SARS-CoV-2","CAATTAGGATGAGATC",2,20.13,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I80G Y91G N107R",3
"lib1","SARS-CoV-2","CAATTAGGATTTTGAA",2,56.26,10.75,-0.01,0.05,2.97,1.03,0,"1 nonsynonymous","S129N",1
"lib1","SARS-CoV-2","CAATTAGTGTTCGCAA",6,183.16,10.23,-0.54,0.04,2.92,1.04,0,">1 nonsynonymous","K87S P149H",2
"lib1","SARS-CoV-2","CAATTATAAGAGTATG",2,0,NA,NA,NA,NA,NA,NA,"stop","L162H F185*",2
"lib1","SARS-CoV-2","CAATTATAAGCTAAGG",2,10.13,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N1L N40V L60M I104R Y123T E141W",6
"lib1","SARS-CoV-2","CAATTATACACTCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56R R73Q Y119* C150R",4
"lib1","SARS-CoV-2","CAATTATACCAAATCC",5,29.07,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","S19E I28Q Q163R",3
"lib1","SARS-CoV-2","CAATTATAGAATAAAA",2,19.27,6.08,-4.68,1.23,1.5,1.22,0.05,">1 nonsynonymous","V11H C49R I138M V173S",4
"lib1","SARS-CoV-2","CAATTATAGATCCTAA",5,9.56,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L183N",1
"lib1","SARS-CoV-2","CAATTATCCCGCTGCC",4,55.94,9.81,-0.96,0.08,2.53,1.02,0,">1 nonsynonymous","G9Y S41A D98S F134E",4
"lib1","SARS-CoV-2","CAATTATCCTAACTTG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","R124* A145I",2
"lib1","SARS-CoV-2","CAATTATGAAGGGATA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C Y91V",2
"lib1","SARS-CoV-2","CAATTATTACGAGCTA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","T140* N171S",2
"lib1","SARS-CoV-2","CAATTATTAGCATATT",6,139.3,10.47,-0.3,0.03,2.88,1.05,0,"1 nonsynonymous","Y123R",1
"lib1","SARS-CoV-2","CAATTATTATTGAAGT",1,17.48,10.74,-0.03,0.07,3,1,0,"1 nonsynonymous","V32C",1
"lib1","SARS-CoV-2","CAATTATTTGAACTAG",3,0.13,NA,NA,NA,NA,NA,NA,"stop","L5V N109Y R124Q T140* F156T A190F",6
"lib1","SARS-CoV-2","CAATTCAAAACCGGCC",3,24.35,9.99,-0.78,0.12,2.46,1.14,0.01,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","CAATTCAACGCAGGAG",5,62.46,10.79,0.02,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTCAAGCCTAGAC",11,77.29,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4T L95K F99P",3
"lib1","SARS-CoV-2","CAATTCAATATCATGT",4,24.21,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","N13I A22L G155T S164G",4
"lib1","SARS-CoV-2","CAATTCAATCCGAGGG",8,131.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9S R27T L38S S113W",4
"lib1","SARS-CoV-2","CAATTCAATGACCAAA",6,128.54,10.75,-0.02,0.06,2.94,1.04,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","CAATTCACAATGTAAT",5,109.46,10.6,-0.16,0.04,2.95,1.05,0,">1 nonsynonymous","F47I K56E",2
"lib1","SARS-CoV-2","CAATTCACCACCCATT",1,16.82,6.71,-4.05,0.43,1.6,1.16,0.03,">1 nonsynonymous","V77D G155V",2
"lib1","SARS-CoV-2","CAATTCACTGCGCAAA",4,72.67,10.53,-0.23,0.03,2.94,1.05,0,">1 nonsynonymous","P54S N120G",2
"lib1","SARS-CoV-2","CAATTCAGGCCTAAAT",3,35.37,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R27M N58T A81R G146F",4
"lib1","SARS-CoV-2","CAATTCAGGGAGTTCG",1,63.42,10.14,-0.63,0.05,2.84,1.05,0,">1 nonsynonymous","F44W N130I G152V",3
"lib1","SARS-CoV-2","CAATTCATAAGCAGTC",6,1.51,NA,NA,NA,NA,NA,NA,"stop","P82* R124S",2
"lib1","SARS-CoV-2","CAATTCATCACGGCCC",1,12.23,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K114P N120L G152V",3
"lib1","SARS-CoV-2","CAATTCATGACGGGTA",3,55.61,10.2,-0.56,0.08,2.63,1.02,0,">1 nonsynonymous","C61G D98C T140R",3
"lib1","SARS-CoV-2","CAATTCCAAAAAAACA",4,28.11,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C6M K132Y C150L",3
"lib1","SARS-CoV-2","CAATTCCAAAACACTA",3,61.67,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","Y39P G83K I88A D98L C150Y",5
"lib1","SARS-CoV-2","CAATTCCAAAAGCTGC",5,0.27,NA,NA,NA,NA,NA,NA,"stop","W23* V37D",2
"lib1","SARS-CoV-2","CAATTCCAAAAGGAAG",1,1.71,NA,NA,NA,NA,NA,NA,"stop","Y39* Y165N",2
"lib1","SARS-CoV-2","CAATTCCACAGGAATA",1,22.68,10.74,-0.03,0.11,2.95,1.03,0,">1 nonsynonymous","F44T K56M P197A",3
"lib1","SARS-CoV-2","CAATTCCACCCACCAT",3,15.77,6.37,-4.4,0.79,1.5,1.32,0.04,">1 nonsynonymous","A105T L131T G152C",3
"lib1","SARS-CoV-2","CAATTCCAGGACGGAT",5,0.07,NA,NA,NA,NA,NA,NA,"stop","S36* F160T",2
"lib1","SARS-CoV-2","CAATTCCCACATCGAA",3,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R S139V V180S",3
"lib1","SARS-CoV-2","CAATTCCCCACTTAAA",13,177.99,10.64,-0.12,0.03,2.92,1.03,0,">1 nonsynonymous","D59K D97T",2
"lib1","SARS-CoV-2","CAATTCCCCGTCTATA",8,183.41,10.78,0.02,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTCCCGAAATAAA",3,42.7,10.77,0.01,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTCCGCGAATGCT",3,104.95,10.43,-0.33,0.05,2.93,1.03,0,"1 nonsynonymous","E154D",1
"lib1","SARS-CoV-2","CAATTCCGTGAAAATA",4,43.96,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I2K S19V L111P",3
"lib1","SARS-CoV-2","CAATTCCGTTGAGACA",3,19.28,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Y91G P161G",2
"lib1","SARS-CoV-2","CAATTCCTCCAGTGAG",5,0.63,NA,NA,NA,NA,NA,NA,"stop","E10I A14G R25* N58M D90L A105N K114A Y123W",8
"lib1","SARS-CoV-2","CAATTCCTGCGTCATT",2,7.51,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","A33S T63D Y91V C102R",4
"lib1","SARS-CoV-2","CAATTCCTTGAGAGTG",10,205.58,10.75,-0.02,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTCGGATTTGAGC",3,11.16,6,-4.76,2,1.5,1.33,0.08,">1 nonsynonymous","V65P F134A I142S",3
"lib1","SARS-CoV-2","CAATTCGGTGTCGGAG",4,24.27,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","I80K Y119P Y175N",3
"lib1","SARS-CoV-2","CAATTCTACAAAGGCC",2,1801.38,10.46,-0.3,0.03,2.88,1.03,0,"1 nonsynonymous","N13G",1
"lib1","SARS-CoV-2","CAATTCTACTGAATAG",4,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V I72S K87I P133I T170V T201C",6
"lib1","SARS-CoV-2","CAATTCTATAAAACTA",5,82.6,10.54,-0.23,0.04,2.92,1.01,0,">1 nonsynonymous","N64V N130Q H189C",3
"lib1","SARS-CoV-2","CAATTCTCCTCCAGCG",3,35.48,10.05,-0.71,0.14,2.36,1.07,0.01,">1 nonsynonymous","K48Y S184F",2
"lib1","SARS-CoV-2","CAATTCTTAACGTAAT",1,6.77,8.99,-1.78,0.36,1.79,1.16,0.03,">1 nonsynonymous","C61V T85P D90A K128T E141L",5
"lib1","SARS-CoV-2","CAATTGAAACTTATTT",1,11.34,10.77,0.01,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTGAACATGTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M N151I",2
"lib1","SARS-CoV-2","CAATTGAAGCTATCTG",6,48.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K114W D137L R179Y",3
"lib1","SARS-CoV-2","CAATTGACCGCACCTA",5,40.02,6,-4.76,0.54,1.5,1.09,0.01,">1 nonsynonymous","V103R G152C",2
"lib1","SARS-CoV-2","CAATTGACTCTCAGAC",6,43.38,9.87,-0.89,0.13,2.4,1.07,0.01,">1 nonsynonymous","N13L K48D",2
"lib1","SARS-CoV-2","CAATTGAGAATCTATC",4,187.63,10.67,-0.09,0.05,2.89,1.05,0,">1 nonsynonymous","G9T S53L",2
"lib1","SARS-CoV-2","CAATTGAGGAGTACAA",1,9.14,6.98,-3.78,0.57,1.5,1.01,0.06,">1 nonsynonymous","K26W L60E D97A V103M",4
"lib1","SARS-CoV-2","CAATTGATACGTTGAA",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96A E135W I142M Y159V Y178L T201M",6
"lib1","SARS-CoV-2","CAATTGATTATGGCTA",2,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","CAATTGCACACGCCTT",6,204.86,10.73,-0.03,0.06,2.92,1.05,0,"1 nonsynonymous","K199E",1
"lib1","SARS-CoV-2","CAATTGCACCACCTAC",3,78.01,8.59,-2.18,0.1,2.61,1.07,0,">1 nonsynonymous","L5N T100N F156E S184L",4
"lib1","SARS-CoV-2","CAATTGCAGGGGAAAG",1,60.72,10.33,-0.43,0.05,2.95,1.01,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","CAATTGCAGTTACACA",3,72.94,9.75,-1.02,0.13,2.15,1.09,0,">1 nonsynonymous","Y121W P149T",2
"lib1","SARS-CoV-2","CAATTGCTTGATCGAG",4,142.46,8.48,-2.28,0.12,2.88,1.02,0.01,">1 nonsynonymous","K132G P149I Q168K P197T",4
"lib1","SARS-CoV-2","CAATTGGAACCCGAAC",11,1.92,NA,NA,NA,NA,NA,NA,"stop","Y35A Y119L Y175* H189N",4
"lib1","SARS-CoV-2","CAATTGGAGTAACTAG",1,17.28,10.69,-0.07,0.06,2.98,1,0,"1 nonsynonymous","V32S",1
"lib1","SARS-CoV-2","CAATTGGATATATACA",3,0.72,NA,NA,NA,NA,NA,NA,"stop","A89* N92* G155S G166S",4
"lib1","SARS-CoV-2","CAATTGGATGTAAGAT",1,10.07,8.87,-1.9,0.44,1.5,1,0.07,">1 nonsynonymous","R16S Y39S Q84P D90S",4
"lib1","SARS-CoV-2","CAATTGGCCATAAAAC",1,69.09,10.71,-0.05,0.04,2.92,1.03,0,">1 nonsynonymous","T15L R27K",2
"lib1","SARS-CoV-2","CAATTGGCGTCCGCGA",2,25.41,9.41,-1.35,0.22,1.89,1.06,0.02,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CAATTGGGAAAGGCGG",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F F99T V180H",3
"lib1","SARS-CoV-2","CAATTGGTACTGAATA",13,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q A89I",2
"lib1","SARS-CoV-2","CAATTGGTTGACTGGT",2,20.74,10.61,-0.16,0.12,2.89,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAATTGTAAAAAAGAG",6,78.19,10.74,-0.03,0.05,2.92,1.05,0,">1 nonsynonymous","K87R P197V",2
"lib1","SARS-CoV-2","CAATTGTAGTACAAAG",9,179.03,10.56,-0.21,0.09,2.77,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTGTATTGTGCAG",3,203.27,9.42,-1.34,0.06,2.85,1.1,0,">1 nonsynonymous","Y119V N130A T148S",3
"lib1","SARS-CoV-2","CAATTGTCAACCATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11K C61* I80L",3
"lib1","SARS-CoV-2","CAATTGTCTACGGGAG",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S Y66F N92E T193Y V194G",5
"lib1","SARS-CoV-2","CAATTGTGAGCTACGG",7,17.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86P W106S T201Y",3
"lib1","SARS-CoV-2","CAATTGTGGACCGCAA",4,4.1,NA,NA,NA,NA,NA,NA,"stop","F17* V65R",2
"lib1","SARS-CoV-2","CAATTTAAAAACATCT",5,17.77,6.9,-3.87,0.57,1.5,1.1,0.07,">1 nonsynonymous","L60R N107K V182R",3
"lib1","SARS-CoV-2","CAATTTAACTACTCGG",6,42.69,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I2Y N92L",2
"lib1","SARS-CoV-2","CAATTTAATAATGATT",1,70.76,7.14,-3.62,0.28,1.5,1.12,0.02,">1 nonsynonymous","F12G Y119H",2
"lib1","SARS-CoV-2","CAATTTACACTTGCAG",5,122.33,6.37,-4.39,0.42,1.5,1.21,0.01,">1 nonsynonymous","N120Q S129A C150R",3
"lib1","SARS-CoV-2","CAATTTACCCAATCGA",5,62.51,10.2,-0.56,0.07,2.81,1,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","CAATTTACGACTCCTA",5,39.97,6.65,-4.12,0.41,1.5,1.17,0.02,">1 nonsynonymous","A14P D98N N118I I138R",4
"lib1","SARS-CoV-2","CAATTTACGTGCTAAT",9,108.95,10.19,-0.57,0.05,2.88,1.03,0,">1 nonsynonymous","N13Y K114Q",2
"lib1","SARS-CoV-2","CAATTTACTTACACAC",3,14.3,9.29,-1.48,0.13,2.71,1.1,0.01,">1 nonsynonymous","I2P G74R Y175F",3
"lib1","SARS-CoV-2","CAATTTAGAATACTGA",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A L188V",2
"lib1","SARS-CoV-2","CAATTTAGCTGACGAG",16,5.35,NA,NA,NA,NA,NA,NA,"stop","Y35R K94F G146* F167V",4
"lib1","SARS-CoV-2","CAATTTAGTAATTCAG",1,5.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R G86R S129D",3
"lib1","SARS-CoV-2","CAATTTAGTAGCTTCT",3,89,10.68,-0.08,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTTAGTTGCTCCA",1,11.64,6,-4.76,2,3,1.03,0,">1 nonsynonymous","S45F N157Q G166V",3
"lib1","SARS-CoV-2","CAATTTATAATAGGGA",10,104.94,9.4,-1.37,0.06,2.67,1.12,0,">1 nonsynonymous","E10P R73S",2
"lib1","SARS-CoV-2","CAATTTATGAAGCTGA",5,148.03,10.72,-0.05,0.05,2.9,1.06,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","CAATTTATGAGTTATC",11,159.88,10.82,0.05,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAATTTCAAGCTTTCA",1,35.7,6.66,-4.11,0.2,2.72,1.12,0,">1 nonsynonymous","C6Y V37C C61N K87D N120L",5
"lib1","SARS-CoV-2","CAATTTCACTAATCCA",2,16.6,6.06,-4.71,1.56,1.5,1.32,0.06,">1 nonsynonymous","G9M G51C A89H P197K",4
"lib1","SARS-CoV-2","CAATTTCATTATCATG",3,65.81,10.73,-0.03,0.04,2.95,1.01,0,">1 nonsynonymous","S41V T201A",2
"lib1","SARS-CoV-2","CAATTTCATTTCGCGG",3,121.05,9.97,-0.8,0.09,2.27,1.03,0,">1 nonsynonymous","S41A D59L Y91L",3
"lib1","SARS-CoV-2","CAATTTCCAATTCATC",9,54.48,7.92,-2.85,0.22,1.5,1.08,0.02,">1 nonsynonymous","T3L Y165A",2
"lib1","SARS-CoV-2","CAATTTCCGATACCTT",1,69.93,10.68,-0.09,0.08,2.88,1.04,0,">1 nonsynonymous","I2C R27L S41T A192M",4
"lib1","SARS-CoV-2","CAATTTCGGTCCGACC",9,70.69,9.38,-1.39,0.16,1.5,1.1,0.01,">1 nonsynonymous","A22V A81T",2
"lib1","SARS-CoV-2","CAATTTCTAGTGATCG",4,73.01,10.24,-0.52,0.05,2.92,1,0,">1 nonsynonymous","C6D A33G",2
"lib1","SARS-CoV-2","CAATTTCTATATAGTA",2,79.57,9.82,-0.95,0.05,2.84,1.07,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","CAATTTGAATTAAAAG",2,45.93,7.16,-3.6,0.32,1.5,1.13,0.02,">1 nonsynonymous","L5Q W23S F44A V77L",4
"lib1","SARS-CoV-2","CAATTTGAGAGAGATC",3,67.29,9.35,-1.42,0.09,2.85,1.1,0,">1 nonsynonymous","Y119L T201M",2
"lib1","SARS-CoV-2","CAATTTGAGCTACAAA",1,24.17,8.15,-2.62,0.14,1.97,1.12,0.01,">1 nonsynonymous","G146T P169S S184E",3
"lib1","SARS-CoV-2","CAATTTGCGTTTCGTA",1,7.1,10.53,-0.24,0.36,1.5,1,0.05,">1 nonsynonymous","F8L I72L I88M D97H",4
"lib1","SARS-CoV-2","CAATTTGGAAGATGCA",15,192.58,10.69,-0.07,0.05,2.88,1.06,0,"1 nonsynonymous","F160H",1
"lib1","SARS-CoV-2","CAATTTGGATGGTATG",6,25.31,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G51H I88T F99D H189V",4
"lib1","SARS-CoV-2","CAATTTGTCGACCACA",3,72.02,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K94D R127Q",2
"lib1","SARS-CoV-2","CAATTTTAACTTCACT",3,12.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S53M G86I T100P V181K",4
"lib1","SARS-CoV-2","CAATTTTACATAGGTA",1,67.84,9.9,-0.86,0.1,2.53,1.01,0,">1 nonsynonymous","G9V Y91I",2
"lib1","SARS-CoV-2","CAATTTTATTCTGAAT",5,25.13,10.69,-0.08,0.03,2.95,1.01,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","CAATTTTCGCACCCCG",7,56.69,10.64,-0.13,0.09,2.73,1.09,0,">1 nonsynonymous","A14S K56S N120D",3
"lib1","SARS-CoV-2","CAATTTTGCCCAGAAG",1,15.12,8.57,-2.19,0.19,2.72,1.17,0.02,">1 nonsynonymous","C61N I142S G152S F160S",4
"lib1","SARS-CoV-2","CAATTTTTAATTGTCA",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K V71W N120R",3
"lib1","SARS-CoV-2","CACAAAAAAAAACAAT",1,14.7,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C31W S45A P161F",3
"lib1","SARS-CoV-2","CACAAAAAAACAGAAT",3,21.61,10.32,-0.44,0.06,2.8,1.07,0,">1 nonsynonymous","N4W T15K",2
"lib1","SARS-CoV-2","CACAAAAAAACTCAAT",3,21.53,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I2R V11A N107T Y119M S129N",5
"lib1","SARS-CoV-2","CACAAAAAACATCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib1","SARS-CoV-2","CACAAAAAACATTCCG",3,89.07,10.7,-0.06,0.04,2.96,1,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","CACAAAAAAGTGCTAG",2,11.13,6,-4.76,0.64,3,1.05,0,">1 nonsynonymous","F62R T85L A89R P149R C150F G196K",6
"lib1","SARS-CoV-2","CACAAAAAATGAATCT",2,42.54,9,-1.76,0.16,1.5,1.08,0.01,">1 nonsynonymous","R73K G83H A89S R136V",4
"lib1","SARS-CoV-2","CACAAAAACAAAACCC",5,77.66,8.52,-2.25,0.3,1.56,1.12,0.04,">1 nonsynonymous","N107W N130I L188G",3
"lib1","SARS-CoV-2","CACAAAAAGCAAAACG",2,53.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V32Q L60I P96L K198F",4
"lib1","SARS-CoV-2","CACAAAACAAAATAAG",1,8.32,8.93,-1.84,0.3,1.85,1.23,0.04,">1 nonsynonymous","N92S V115G",2
"lib1","SARS-CoV-2","CACAAAACACCCATTA",7,63.43,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R127L S139R C150G F160Y",4
"lib1","SARS-CoV-2","CACAAAACATACTATT",1,19.06,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","L57S F99L I142E",3
"lib1","SARS-CoV-2","CACAAAACCTACGCTA",7,225.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38R N130A Q176S",3
"lib1","SARS-CoV-2","CACAAAACGGAACCAA",2,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K T201Q",2
"lib1","SARS-CoV-2","CACAAAACTAACGTCT",2,5.22,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T15G A33V L38M Y165C T170E",5
"lib1","SARS-CoV-2","CACAAAAGAACAATTA",5,25.77,6.24,-4.52,1.32,1.5,1.23,0.08,">1 nonsynonymous","C49Y K94D",2
"lib1","SARS-CoV-2","CACAAAATAAACCCCA",5,150.08,10.28,-0.49,0.04,2.84,1,0,"1 nonsynonymous","Y35H",1
"lib1","SARS-CoV-2","CACAAAATACCAATCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I S53L T170M",3
"lib1","SARS-CoV-2","CACAAAATCACCTTGT",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I N64H D90S T170V",4
"lib1","SARS-CoV-2","CACAAAATCCGTTGAA",5,55.23,9.08,-1.69,0.06,2.62,1.1,0,">1 nonsynonymous","K56R F167W",2
"lib1","SARS-CoV-2","CACAAAATGACATTGT",8,72.92,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","R124L V182N",2
"lib1","SARS-CoV-2","CACAAAATGCAAAAAC",1,39.68,8.42,-2.35,0.1,2.65,1.1,0,">1 nonsynonymous","T55D L60V D97L Y119H N157D",5
"lib1","SARS-CoV-2","CACAAAATGGTAATGT",2,44.81,10.81,0.04,0.11,2.94,1.05,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","CACAAAATGTTAATTA",1,21.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N107Y V115R I142L Y165I",4
"lib1","SARS-CoV-2","CACAAACAAACAATCT",9,1.56,NA,NA,NA,NA,NA,NA,"stop","E10S Y50* T55S T63L T100F C150M",6
"lib1","SARS-CoV-2","CACAAACAACTATGCA",6,68.41,7.64,-3.12,0.22,1.5,1.17,0.01,">1 nonsynonymous","W106G Q144D",2
"lib1","SARS-CoV-2","CACAAACAATTGAAAG",7,46.54,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9N D34V N58I F167S",4
"lib1","SARS-CoV-2","CACAAACACCCTGCCA",5,12.52,8.49,-2.28,0.3,1.5,1.04,0.02,">1 nonsynonymous","L5R I88V D98H Y121S T201H",5
"lib1","SARS-CoV-2","CACAAACATCTTATAG",3,108.17,9.17,-1.59,0.12,2.15,1.15,0.01,">1 nonsynonymous","G9H L60M D97R S113T Y123W",5
"lib1","SARS-CoV-2","CACAAACATTCCTTAT",1,69.74,8.36,-2.41,0.18,1.98,1.07,0.01,">1 nonsynonymous","I2M S45L N64K Y119F",4
"lib1","SARS-CoV-2","CACAAACCAAAACACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N58M K87A Y91*",3
"lib1","SARS-CoV-2","CACAAACCAAAACATT",1,17.51,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T3V F99C",2
"lib1","SARS-CoV-2","CACAAACCACTCGATC",4,47.79,6.13,-4.63,0.86,1.5,1.16,0.02,">1 nonsynonymous","D34R S43A F167M",3
"lib1","SARS-CoV-2","CACAAACCATTAAAAG",4,69.43,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L5H K56N D68W N107T",4
"lib1","SARS-CoV-2","CACAAACCTCCATTAA",7,132.04,9.42,-1.35,0.11,2.16,1.14,0.01,">1 nonsynonymous","T63S F134N Q176M",3
"lib1","SARS-CoV-2","CACAAACCTTAGAGGT",3,175.4,9.11,-1.66,0.08,2.11,1.12,0,">1 nonsynonymous","G9S F62Y Q176R",3
"lib1","SARS-CoV-2","CACAAACCTTGATACA",7,256.57,10.76,-0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAAACGATAGTTCC",1,14.72,10.14,-0.63,0.13,2.64,1,0.01,">1 nonsynonymous","D90W T140F",2
"lib1","SARS-CoV-2","CACAAACGATGATCAA",11,163.17,8.7,-2.06,0.07,2.9,1.1,0,">1 nonsynonymous","V37I S147P G166E T201N",4
"lib1","SARS-CoV-2","CACAAACGCAAAATTT",4,33.06,10.12,-0.64,0.11,2.16,1.01,0.01,">1 nonsynonymous","N1R W106K",2
"lib1","SARS-CoV-2","CACAAACGCTAAGTTA",7,58.42,9.12,-1.64,0.06,2.89,1.1,0,">1 nonsynonymous","P7K C61H T170E",3
"lib1","SARS-CoV-2","CACAAACGGGATAGTC",2,31.29,10.73,-0.03,0.08,2.9,1.07,0,">1 nonsynonymous","T55Q I138N",2
"lib1","SARS-CoV-2","CACAAACGTGCTAAAA",3,38.71,9.97,-0.79,0.13,2.6,1.05,0,">1 nonsynonymous","V20I F185Y H189D",3
"lib1","SARS-CoV-2","CACAAACGTTGTACGT",4,68.82,10.66,-0.11,0.06,2.9,1.06,0,"1 nonsynonymous","V115Y",1
"lib1","SARS-CoV-2","CACAAACTCAGTACAT",2,62.41,10.25,-0.51,0.05,2.75,1.11,0,">1 nonsynonymous","Y35T F44H",2
"lib1","SARS-CoV-2","CACAAAGAATGTAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","F12S S69A N107K T148L G174A S184*",6
"lib1","SARS-CoV-2","CACAAAGACCTATTGG",2,22.65,8.22,-2.54,0.28,1.5,1.13,0.03,">1 nonsynonymous","R16Q G86K",2
"lib1","SARS-CoV-2","CACAAAGCAATCAGCT",3,3.87,NA,NA,NA,NA,NA,NA,"stop","F12* S19R K26* T63D P133F",5
"lib1","SARS-CoV-2","CACAAAGCACTATCAA",4,33.55,10.23,-0.53,0.07,2.99,1,0,"1 nonsynonymous","G51A",1
"lib1","SARS-CoV-2","CACAAAGCTATTTTAG",9,98.14,10.57,-0.19,0.06,2.88,1.06,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","CACAAAGCTTCTTGAT",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R E76R I104D",3
"lib1","SARS-CoV-2","CACAAAGGAGACGAAA",1,13.96,10.67,-0.1,0.05,2.98,1.04,0,"1 nonsynonymous","N64Y",1
"lib1","SARS-CoV-2","CACAAAGGATGAGCCA",2,120.31,10.35,-0.42,0.05,2.91,1.01,0,">1 nonsynonymous","S29Q Y178T",2
"lib1","SARS-CoV-2","CACAAAGGGTAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* L60C",2
"lib1","SARS-CoV-2","CACAAAGTACAATGAG",4,133.9,10.23,-0.53,0.06,2.77,1,0,">1 nonsynonymous","G83V S129R",2
"lib1","SARS-CoV-2","CACAAAGTACCGTTGA",4,117.79,10.5,-0.27,0.04,2.93,1.04,0,"1 nonsynonymous","G155M",1
"lib1","SARS-CoV-2","CACAAAGTCTGAACAA",4,50.79,9.38,-1.38,0.07,2.84,1.15,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","CACAAAGTTATGAATG",9,159.71,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68M A105S F167A",3
"lib1","SARS-CoV-2","CACAAATAAAAATACA",4,14.23,9.65,-1.11,0.06,2.81,1,0,">1 nonsynonymous","S45K Q163E L188P",3
"lib1","SARS-CoV-2","CACAAATAAAATCTGG",3,55.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66R P149M C158A",3
"lib1","SARS-CoV-2","CACAAATAATATTCAA",1,51.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K26T G101I G116H R124S I138W",5
"lib1","SARS-CoV-2","CACAAATACAGGGTTA",1,22.72,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","P7L S19E S139H",3
"lib1","SARS-CoV-2","CACAAATCAGCGTGAA",1,31.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71D G86D",2
"lib1","SARS-CoV-2","CACAAATCCCCCATGG",2,9,6,-4.76,2,3,1.35,0.03,">1 nonsynonymous","F12I C61L Y119E R127K I142L",5
"lib1","SARS-CoV-2","CACAAATCTAAGGTAC",5,0.3,NA,NA,NA,NA,NA,NA,"stop","T15* Y165L",2
"lib1","SARS-CoV-2","CACAAATGACACCAAT",5,56.12,8.13,-2.63,0.26,1.5,1.09,0.03,">1 nonsynonymous","P82N T140K",2
"lib1","SARS-CoV-2","CACAAATGCTATCAAT",5,38.99,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6S N118A D137A V153G V173S P197T",6
"lib1","SARS-CoV-2","CACAAATTAAACCGGA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","A14G D90Y D97* L122S",4
"lib1","SARS-CoV-2","CACAAATTCGCCATAC",2,49.35,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y121R Y165I",2
"lib1","SARS-CoV-2","CACAAATTCGTAAACC",7,2.47,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","CACAAATTTAATTTTA",12,56.59,8.75,-2.01,0.19,1.5,1.14,0.02,">1 nonsynonymous","L183T A192Y",2
"lib1","SARS-CoV-2","CACAAATTTTCAATCA",2,34.41,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E135S C158Y G172K",3
"lib1","SARS-CoV-2","CACAACAAAACGACCC",4,283.01,10.69,-0.08,0.04,2.93,1.03,0,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","CACAACAAAAGCTTAT",1,14.08,10.88,0.11,0.17,2.87,1.04,0.01,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","CACAACAAACAACAAT",3,36.11,6,-4.76,1.73,1.5,1.17,0.03,">1 nonsynonymous","C6W F12V R25S Q84G",4
"lib1","SARS-CoV-2","CACAACAAACACACAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","L122S F156* V180H S184T",4
"lib1","SARS-CoV-2","CACAACAAACATGCCG",5,62.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14T S36D T63S G83N N157S C158Y",6
"lib1","SARS-CoV-2","CACAACAAATATACAC",2,23.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49T D98W L162M",3
"lib1","SARS-CoV-2","CACAACAAATCCTAAG",2,26.68,6,-4.76,1.13,3,1.07,0,">1 nonsynonymous","I72M Y165L",2
"lib1","SARS-CoV-2","CACAACAACATAACCG",5,43.86,10.08,-0.69,0.07,2.64,1.03,0,"1 nonsynonymous","Y21S",1
"lib1","SARS-CoV-2","CACAACAACCCATCCA",6,33.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8S S41V L95P V103Y",4
"lib1","SARS-CoV-2","CACAACAACCGCATTG",1,86.28,6.34,-4.42,0.57,1.5,1.16,0.02,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","CACAACAACTACGGCA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","CACAACAACTGTCCCA",10,88.41,10.52,-0.24,0.06,2.93,1.05,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","CACAACAAGATTTCAG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","A105N P169*",2
"lib1","SARS-CoV-2","CACAACAAGCACTTAC",3,330.32,10.67,-0.09,0.05,2.94,1.04,0,"1 nonsynonymous","P54T",1
"lib1","SARS-CoV-2","CACAACAAGGGATAAG",2,7.56,6,-4.76,2,1.5,1.26,0.03,"1 nonsynonymous","F99P",1
"lib1","SARS-CoV-2","CACAACAAGTAGGGGA",2,28.92,10.17,-0.59,0.15,2.14,1.03,0.01,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","CACAACAATACAAAAT",4,110.2,10.3,-0.47,0.03,2.93,1.02,0,"1 nonsynonymous","L125G",1
"lib1","SARS-CoV-2","CACAACAATGCCAATA",6,67.34,10.67,-0.1,0.07,2.92,1.05,0,"1 nonsynonymous","L60E",1
"lib1","SARS-CoV-2","CACAACACAAATAATT",6,67.16,6.38,-4.39,0.61,1.5,1.23,0.03,">1 nonsynonymous","P7Q Q84R D112E N118D K132L",5
"lib1","SARS-CoV-2","CACAACACAACACAAG",5,31.5,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","L38T C49P D97S",3
"lib1","SARS-CoV-2","CACAACACACGTGAAT",1,17.22,9.41,-1.36,0.24,2.36,1.01,0.02,">1 nonsynonymous","F8R N109Y",2
"lib1","SARS-CoV-2","CACAACACAGAAGGGT",1,111.31,10.63,-0.13,0.06,2.92,1.03,0,">1 nonsynonymous","V115Y A190R",2
"lib1","SARS-CoV-2","CACAACACGACTCCAT",5,17.91,10.62,-0.14,0.08,2.84,1.14,0,">1 nonsynonymous","L5D N64F",2
"lib1","SARS-CoV-2","CACAACACGCCCCCGC",5,67.79,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A14R I88V G117D I138G",4
"lib1","SARS-CoV-2","CACAACACGGTATTTC",2,23.31,9.92,-0.84,0.05,2.86,1.04,0,">1 nonsynonymous","N58R E154L",2
"lib1","SARS-CoV-2","CACAACACGTCCATAA",3,34.56,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T55E G116C Y165T",3
"lib1","SARS-CoV-2","CACAACAGCCAGAGAT",6,36.59,10.76,0,0.06,2.96,1,0,">1 nonsynonymous","N40E A190V",2
"lib1","SARS-CoV-2","CACAACAGTGGATTTA",3,68.45,9.91,-0.85,0.11,2.5,1.05,0,">1 nonsynonymous","Y91S Y143F",2
"lib1","SARS-CoV-2","CACAACCAATCTAATG",1,11.17,9,-1.76,0.38,1.84,1.22,0.07,">1 nonsynonymous","W106M R136S",2
"lib1","SARS-CoV-2","CACAACCATATGCCAC",6,214.63,10.77,0.01,0.07,2.92,1.06,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","CACAACCCCAAATCAA",6,78.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8N C158K S200N",3
"lib1","SARS-CoV-2","CACAACCCTCAGAACT",3,43.06,9.19,-1.58,0.15,1.52,1.09,0.01,">1 nonsynonymous","G51Y D75E G83R",3
"lib1","SARS-CoV-2","CACAACCGAAAATTCA",2,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T S43P N92A F99S N130S",5
"lib1","SARS-CoV-2","CACAACCGATGGATGG",2,30.96,10.81,0.05,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAACCGTTGAGAAT",5,9.9,NA,NA,NA,NA,NA,NA,"stop","T3* L60R F160A T201L",4
"lib1","SARS-CoV-2","CACAACCTATAGTCCA",30,406.74,9.16,-1.61,0.09,2.47,1.11,0,">1 nonsynonymous","C6M G174R",2
"lib1","SARS-CoV-2","CACAACGAAACCCGTA",5,3049.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I88F K94Q T140N F167I",4
"lib1","SARS-CoV-2","CACAACGAACTGGATT",4,29.73,6.88,-3.89,0.42,1.5,1.22,0.03,">1 nonsynonymous","F99L I142K S200P",3
"lib1","SARS-CoV-2","CACAACGAAGAACAAC",6,112.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5H D34E R127K I142M Y165M",5
"lib1","SARS-CoV-2","CACAACGACACCTACC",8,30.17,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","G74V I104A N107V",3
"lib1","SARS-CoV-2","CACAACGACTGGCCAT",12,169.77,10.07,-0.7,0.06,2.62,1.04,0,">1 nonsynonymous","Y39D F44L A190H",3
"lib1","SARS-CoV-2","CACAACGATACTAAAA",3,10.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E76K D112L N157A",3
"lib1","SARS-CoV-2","CACAACGGCTGTCAGC",4,51.52,10.14,-0.63,0.1,2.18,1.04,0,">1 nonsynonymous","F8V K48L S164P",3
"lib1","SARS-CoV-2","CACAACGGGACAAGAC",4,0.78,NA,NA,NA,NA,NA,NA,"stop","Y121F I142L E154* Q163D",4
"lib1","SARS-CoV-2","CACAACTAAGACTTAG",1,490.34,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","CACAACTATGGACTAA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","T15* Y21K N30G N58C A89G L125K V173R",7
"lib1","SARS-CoV-2","CACAACTCCTTCAAAA",3,26.64,10.07,-0.69,0.13,2.67,1.02,0.01,">1 nonsynonymous","K56A C61K P96R",3
"lib1","SARS-CoV-2","CACAACTTGGAGGACA",1,21.33,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A14R W23L G51P K114F G155L",5
"lib1","SARS-CoV-2","CACAAGAAATATCTCC",2,7.08,10.69,-0.07,0.11,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAAGAAATTTAAAA",2,68.1,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F12S C31L A145Y",3
"lib1","SARS-CoV-2","CACAAGAACAAAAGTG",14,125.31,10.68,-0.08,0.04,2.92,1.05,0,">1 nonsynonymous","I88V T201R",2
"lib1","SARS-CoV-2","CACAAGAAGCGTGTAT",6,87.72,10.76,0,0.06,2.89,1.04,0,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","CACAAGAAGGTTAATT",1,75.61,8.26,-2.5,0.18,2.49,1.13,0.01,">1 nonsynonymous","N107D G166V",2
"lib1","SARS-CoV-2","CACAAGAATCACAATG",3,27.57,8.76,-2.01,0.2,1.78,1.2,0.01,">1 nonsynonymous","T100D P177A",2
"lib1","SARS-CoV-2","CACAAGACACCGAACC",1,9.78,8.88,-1.88,0.21,2.4,1.09,0.03,">1 nonsynonymous","G83S Y121P",2
"lib1","SARS-CoV-2","CACAAGACTTATGCAC",3,121.39,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2S R16I V77M K87E R136Q G152E F167H",7
"lib1","SARS-CoV-2","CACAAGAGGGCTTCAG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","CACAAGATAAGTTCCT",2,20.17,6.95,-3.81,0.19,1.71,1.06,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","CACAAGATAATAAAAA",9,92.18,8.67,-2.1,0.08,2.95,1.05,0,">1 nonsynonymous","N64F F126A T140M",3
"lib1","SARS-CoV-2","CACAAGATAGACTCAA",6,50.15,10.29,-0.48,0.07,2.93,1.03,0,">1 nonsynonymous","N40E K48L P54S",3
"lib1","SARS-CoV-2","CACAAGCAACCCACTG",3,10.14,6,-4.76,2,3,1.01,0,">1 nonsynonymous","P7N S41P C61G G86Y Y91L T100S G166F P177S",8
"lib1","SARS-CoV-2","CACAAGCACGAATCAA",3,17.73,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N107F L122W N151G",3
"lib1","SARS-CoV-2","CACAAGCAGCAGCCGC",5,36.45,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","I2Y Q84E Y119E D137I T201G",5
"lib1","SARS-CoV-2","CACAAGCCAAGTTGAA",2,39.09,10.36,-0.41,0.06,2.95,1.02,0,">1 nonsynonymous","F44M A105S T201M",3
"lib1","SARS-CoV-2","CACAAGCCACACACTG",3,37.31,10.42,-0.34,0.08,2.82,1.06,0,">1 nonsynonymous","C61S E141T F160G",3
"lib1","SARS-CoV-2","CACAAGCTAGTGACCA",4,36.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5S N58E N64V Y93L W106S L122S D137C",7
"lib1","SARS-CoV-2","CACAAGGAAATGAAAA",2,35.82,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R25S K56F T63A N64K T85M K198D",6
"lib1","SARS-CoV-2","CACAAGGAATTGAACG",2,21.83,6,-4.76,2,1.5,1.07,0.05,">1 nonsynonymous","P82G C102Y L122Q L131D T201I",5
"lib1","SARS-CoV-2","CACAAGGCTTTCCTCC",7,212.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12W Y35V S41V Y175E T201W",5
"lib1","SARS-CoV-2","CACAAGGCTTTGTCCC",3,24.92,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N107Y R136L E141W",3
"lib1","SARS-CoV-2","CACAAGGGCAACTCAC",2,46.95,8.97,-1.79,0.14,2.64,1.16,0.01,">1 nonsynonymous","Y119E I138P",2
"lib1","SARS-CoV-2","CACAAGGGTTCTTACA",8,66.79,10.14,-0.62,0.05,2.72,1.04,0,">1 nonsynonymous","S41H N107S",2
"lib1","SARS-CoV-2","CACAAGTAACTGCGAT",5,0.23,NA,NA,NA,NA,NA,NA,"stop","I2* R179A",2
"lib1","SARS-CoV-2","CACAAGTACCCTGTTC",1,7.03,6,-4.76,2,1.5,1.1,0.05,">1 nonsynonymous","T63P G86M P96L",3
"lib1","SARS-CoV-2","CACAAGTATAAAGAAC",5,45.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86N L122M Y143A P161M T170H",5
"lib1","SARS-CoV-2","CACAAGTTTTTTTACG",1,88.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44N Y159S Q168C",3
"lib1","SARS-CoV-2","CACAATAAAACTCTCT",8,150.34,8.23,-2.54,0.16,1.67,1.19,0.01,">1 nonsynonymous","S43N G86Q T201C",3
"lib1","SARS-CoV-2","CACAATAAAAGACAAT",5,75.86,9.72,-1.05,0.08,2.67,1.06,0,">1 nonsynonymous","T15A K87V P133T",3
"lib1","SARS-CoV-2","CACAATAAAAGATTCA",2,24.93,9.85,-0.91,0.13,2.48,1.01,0.01,">1 nonsynonymous","T15K S41W G152V",3
"lib1","SARS-CoV-2","CACAATAAAGATACAT",1,14.58,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","Y91G C102R Q168L",3
"lib1","SARS-CoV-2","CACAATAAATGGAAAA",5,60.24,10.5,-0.26,0.08,2.93,1,0,">1 nonsynonymous","T100H G155R",2
"lib1","SARS-CoV-2","CACAATAAATGTCAGT",2,22.57,10.77,0,0.09,2.97,1.03,0,"1 nonsynonymous","S53A",1
"lib1","SARS-CoV-2","CACAATAACCTTCCTA",5,143.37,8.3,-2.46,0.16,2.16,1.17,0.01,">1 nonsynonymous","Q84L N157M",2
"lib1","SARS-CoV-2","CACAATAATAATTCAA",7,76.37,9.21,-1.56,0.11,2,1.13,0,">1 nonsynonymous","F62S K87P A105C",3
"lib1","SARS-CoV-2","CACAATAATATGGTTA",2,31.48,10.16,-0.6,0.08,1.91,1.01,0,"1 nonsynonymous","P96M",1
"lib1","SARS-CoV-2","CACAATACAACAATGA",2,15.86,10.07,-0.69,0.12,1.97,1.04,0.01,">1 nonsynonymous","N4S N13V",2
"lib1","SARS-CoV-2","CACAATACACAAATTA",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T C102A G146V",3
"lib1","SARS-CoV-2","CACAATACAGCCACAC",3,0.23,NA,NA,NA,NA,NA,NA,"stop","C31* N40S Y165S",3
"lib1","SARS-CoV-2","CACAATACCCATCATA",4,139.3,10.34,-0.42,0.05,2.9,1.05,0,">1 nonsynonymous","S43N G174N",2
"lib1","SARS-CoV-2","CACAATACTACAATAT",2,45.22,6,-4.76,0.52,3,1.06,0,">1 nonsynonymous","R25S Y91K E141N Y178T H189T",5
"lib1","SARS-CoV-2","CACAATAGAATTAAAT",7,10.51,NA,NA,NA,NA,NA,0.37,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","CACAATAGATTGTAGG",3,55.42,10.42,-0.35,0.07,2.85,1.07,0,">1 nonsynonymous","N1H D59S D90L",3
"lib1","SARS-CoV-2","CACAATAGGATTGTGT",3,23.26,6,-4.76,2,1.5,1.13,0.04,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","CACAATAGTAGTTAAC",5,53.39,8.7,-2.06,0.3,1.5,1,0.04,">1 nonsynonymous","G116W K128M F134I T140H",4
"lib1","SARS-CoV-2","CACAATATAAAGAGCA",2,33.28,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","P96D D112G N130S S200V",4
"lib1","SARS-CoV-2","CACAATATAAATGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6F G116*",2
"lib1","SARS-CoV-2","CACAATATACTAATAT",3,15.13,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N120F C158Y",2
"lib1","SARS-CoV-2","CACAATATAGCATAAT",4,92.4,7.88,-2.88,0.24,1.5,1.09,0.02,">1 nonsynonymous","S36L N58R G83A Y119V",4
"lib1","SARS-CoV-2","CACAATATGAAGAATA",5,53.03,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44P P161I V173I",3
"lib1","SARS-CoV-2","CACAATATGATTTAAA",3,91.38,10.75,-0.01,0.07,2.92,1.05,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","CACAATATGTCATTAT",1,33.82,10.53,-0.23,0.36,2.03,1,0.04,">1 nonsynonymous","Y123G E135G",2
"lib1","SARS-CoV-2","CACAATATGTGTATAA",24,281.89,10.43,-0.34,0.03,2.92,1.03,0,">1 nonsynonymous","R16D Q144N E154N",3
"lib1","SARS-CoV-2","CACAATATTTCAATGC",1,35.74,10.67,-0.1,0.06,2.89,1.06,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","CACAATCAAAAAATCC",11,11.52,9.74,-1.02,0.21,1.83,1.03,0.04,">1 nonsynonymous","T15W D34F D90N",3
"lib1","SARS-CoV-2","CACAATCAATCGATCT",2,57.17,10.79,0.03,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAATCACACTAACG",2,14.04,9.09,-1.68,0.25,1.5,1.11,0.04,">1 nonsynonymous","G9I G86N",2
"lib1","SARS-CoV-2","CACAATCACGAGACGT",4,119.88,10.76,0,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAATCCATATCTAG",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V L95N",2
"lib1","SARS-CoV-2","CACAATCCGGTAAAAT",4,87.71,10.5,-0.27,0.07,2.81,1.06,0,">1 nonsynonymous","N151M P191S",2
"lib1","SARS-CoV-2","CACAATCCTAGTGCCC",1,46.31,8.65,-2.12,0.13,2.84,1.04,0.01,">1 nonsynonymous","P169E Y175H",2
"lib1","SARS-CoV-2","CACAATCGAATAATCA",1,7.81,6.95,-3.81,0.26,1.5,1.03,0.01,">1 nonsynonymous","T15G D112M",2
"lib1","SARS-CoV-2","CACAATCTAAGTAAGC",1,42.79,8.72,-2.04,0.11,2.57,1.11,0.01,">1 nonsynonymous","N120L T170P",2
"lib1","SARS-CoV-2","CACAATCTAATGGACA",7,123.74,9.53,-1.23,0.11,2.02,1.14,0,"1 nonsynonymous","G86N",1
"lib1","SARS-CoV-2","CACAATCTACTAATAA",1,58.3,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6F F8M T100A N151E F167A",5
"lib1","SARS-CoV-2","CACAATCTATAGACAA",1,19.8,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S53W I104N",2
"lib1","SARS-CoV-2","CACAATCTCCGGCCGT",7,125.01,9.34,-1.43,0.07,2.9,1.08,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","CACAATGACCTTACGC",8,276.22,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P7L A18L F44A Q176I G196A",5
"lib1","SARS-CoV-2","CACAATGACGCTTTTC",4,79.72,10.16,-0.61,0.04,2.9,1.04,0,">1 nonsynonymous","P7L Y39P",2
"lib1","SARS-CoV-2","CACAATGAGGGTAGCC",5,10.8,6,-4.76,0.83,3,1.02,0,">1 nonsynonymous","K56M G86N C102H Y159F",4
"lib1","SARS-CoV-2","CACAATGCAAATCATT",6,88.75,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F17A V77G P82S W106V V173N",5
"lib1","SARS-CoV-2","CACAATGCTGGTTCGC",1,0.36,NA,NA,NA,NA,NA,NA,"stop","T3L G9S I138* F156I",4
"lib1","SARS-CoV-2","CACAATGGCCACTAAG",3,18.51,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P7I S36V W106S R124H I142F",5
"lib1","SARS-CoV-2","CACAATGGTGATCCTT",3,28.75,9.05,-1.72,0.21,1.5,1.09,0.02,">1 nonsynonymous","L38S T63P",2
"lib1","SARS-CoV-2","CACAATGTATAGCCAA",6,166.16,10,-0.76,0.11,2.13,1.07,0,">1 nonsynonymous","V11P N151R T201Q",3
"lib1","SARS-CoV-2","CACAATTAACAGTGCT",7,104.03,9.02,-1.75,0.09,2.89,1.11,0,">1 nonsynonymous","A33W K87M Y119S",3
"lib1","SARS-CoV-2","CACAATTAACCTAGTC",1,13.05,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","N58Q P96Y A105V",3
"lib1","SARS-CoV-2","CACAATTAACGAAATT",4,0.6,NA,NA,NA,NA,NA,NA,"stop","V103* K128*",2
"lib1","SARS-CoV-2","CACAATTAGAAGGTTT",1,24.61,10.5,-0.27,0.11,2.87,1.04,0,">1 nonsynonymous","C61W S184T",2
"lib1","SARS-CoV-2","CACAATTAGGTGAGGT",5,134.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S43G I104F G146V Y175S",4
"lib1","SARS-CoV-2","CACAATTAGTATTTTA",3,65.93,10.78,0.02,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAATTATTCAGGAA",6,55.78,6.29,-4.47,0.56,1.5,1.24,0.02,">1 nonsynonymous","N58I R127G E141F",3
"lib1","SARS-CoV-2","CACAATTCAGAACTTA",9,30.89,10.02,-0.74,0.17,2.49,1.02,0.01,">1 nonsynonymous","D34I S41R D59K G146S",4
"lib1","SARS-CoV-2","CACAATTCGAGAAGAA",3,34.64,9.78,-0.98,0.17,1.82,1.07,0.01,">1 nonsynonymous","N4S A89F",2
"lib1","SARS-CoV-2","CACAATTCTATACACG",1,74.41,9.69,-1.08,0.08,1.99,1.04,0,">1 nonsynonymous","P7T V71A",2
"lib1","SARS-CoV-2","CACAATTGCTAAAAGA",4,1.61,NA,NA,NA,NA,NA,NA,"stop","N1P V37I P133F Y175* H189C",5
"lib1","SARS-CoV-2","CACAATTTCGGCTTAC",6,53.45,6.07,-4.69,0.98,1.5,1.2,0.02,">1 nonsynonymous","V77K N120H I142Y",3
"lib1","SARS-CoV-2","CACAATTTGATCCCTG",7,60.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L60T G86V G174D",3
"lib1","SARS-CoV-2","CACAATTTGCAAACGT",6,51.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S I104Q Q163F",3
"lib1","SARS-CoV-2","CACAATTTTGGCAATA",9,105.31,10.81,0.05,0.06,2.93,1.04,0,">1 nonsynonymous","G9A S147T",2
"lib1","SARS-CoV-2","CACACAAAAAACATCT",6,1.77,NA,NA,NA,NA,NA,NA,"stop","R16W D34S T100S V153* N171F",5
"lib1","SARS-CoV-2","CACACAAAACGTAGCT",1,24.69,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I2Y G9M G51Y F62Y Y165L",5
"lib1","SARS-CoV-2","CACACAAACTACTAAG",3,26.67,10.45,-0.32,0.08,2.81,1,0,">1 nonsynonymous","D59V D97K",2
"lib1","SARS-CoV-2","CACACAAATAATGGAG",4,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V W106P F126Q P191V",4
"lib1","SARS-CoV-2","CACACAAATAGAACCG",2,53.29,10.66,-0.1,0.08,2.84,1.07,0,">1 nonsynonymous","D97N N120A",2
"lib1","SARS-CoV-2","CACACAAATGTGGTAT",8,135.97,10.73,-0.04,0.06,2.9,1.07,0,">1 nonsynonymous","T3A N24S",2
"lib1","SARS-CoV-2","CACACAACCAAAAAAA",8,2.83,NA,NA,NA,NA,NA,NA,"stop","Y21K P96W A105S D137T G146S G152*",6
"lib1","SARS-CoV-2","CACACAACCAGGGACG",10,68.44,6,-4.76,1.56,1.5,1.13,0.01,">1 nonsynonymous","V52Q N58S A81I L95T E141I G155Y F167P",7
"lib1","SARS-CoV-2","CACACAACCATATGGA",6,44.99,8.65,-2.11,0.1,2.96,1.07,0,">1 nonsynonymous","I2Q S45T D97I T170D",4
"lib1","SARS-CoV-2","CACACAACTCCCCAGG",2,18.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34S G172Q S200P",3
"lib1","SARS-CoV-2","CACACAAGACACAATG",4,15.25,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V103P E154G",2
"lib1","SARS-CoV-2","CACACAAGCCCACCAA",1,0.73,NA,NA,NA,NA,NA,NA,"stop","V37S S108* D137W P149L G166W",5
"lib1","SARS-CoV-2","CACACAATAACAGTCC",3,3.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CACACAATCCTAATAT",2,25.48,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R25I N107V K128T D137F",4
"lib1","SARS-CoV-2","CACACAATGACAGCCT",11,228.8,10.8,0.04,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACACAATTCAAATTT",2,6.88,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","N118F G146P",2
"lib1","SARS-CoV-2","CACACAATTCGATGCC",9,217.15,10.84,0.08,0.06,2.91,1.03,0,">1 nonsynonymous","I2T P197I",2
"lib1","SARS-CoV-2","CACACAATTTAAAGAC",7,45.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3M A18W Q176G",3
"lib1","SARS-CoV-2","CACACAATTTTTTAGG",1,18.38,10.25,-0.51,0.07,2.93,1.01,0,">1 nonsynonymous","Q84S D90N D98S E141K I142L T201K",6
"lib1","SARS-CoV-2","CACACACAATGCGTTA",5,0.79,NA,NA,NA,NA,NA,NA,"stop","V65I Y143*",2
"lib1","SARS-CoV-2","CACACACACTCTGAAA",1,24.82,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L60S D137R",2
"lib1","SARS-CoV-2","CACACACAGACAATGT",9,101.26,10.71,-0.06,0.03,2.91,1.04,0,">1 nonsynonymous","D98N F160T",2
"lib1","SARS-CoV-2","CACACACATCCAAAAG",9,80.17,9.26,-1.5,0.09,1.97,1.17,0,">1 nonsynonymous","D90L Q144I",2
"lib1","SARS-CoV-2","CACACACATTCAAAGT",1,31.14,9.9,-0.86,0.05,2.97,1,0,"1 nonsynonymous","Y143W",1
"lib1","SARS-CoV-2","CACACACCCCTACATT",3,30.72,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","F12C V103S",2
"lib1","SARS-CoV-2","CACACACGCAGCCAAT",4,103.63,10.32,-0.45,0.04,2.78,1.04,0,">1 nonsynonymous","F44T F160D",2
"lib1","SARS-CoV-2","CACACACTATTAAAGT",7,102.51,10.77,0.01,0.06,2.93,1.03,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","CACACACTCAGAACAT",7,60.07,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8S Y35S G86S",3
"lib1","SARS-CoV-2","CACACACTCCAATTCA",2,68.93,10.32,-0.44,0.04,2.83,1.02,0,"1 nonsynonymous","A105W",1
"lib1","SARS-CoV-2","CACACACTGTGAATCA",2,24.53,7.22,-3.54,0.24,1.5,1.12,0.02,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","CACACAGAATAATCAG",3,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T Y121G R179N",3
"lib1","SARS-CoV-2","CACACAGACCCACCAC",2,12.15,10.78,0.01,0.12,2.82,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CACACAGAGGATATTT",2,15.99,9.99,-0.77,0.2,1.86,1.08,0.02,">1 nonsynonymous","D34S K128S R136S",3
"lib1","SARS-CoV-2","CACACAGCACCTATTG",3,17.47,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D59Y I88F N130V G174W",4
"lib1","SARS-CoV-2","CACACAGCTAATCTTT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I2* G117S G146*",3
"lib1","SARS-CoV-2","CACACAGGCACTGAAC",4,64.73,10.73,-0.03,0.08,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CACACAGGTTAAGATG",6,79.53,10.69,-0.07,0.03,2.93,1.03,0,"1 nonsynonymous","G152H",1
"lib1","SARS-CoV-2","CACACAGTGATGCCAT",14,115.33,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A42R L57S K87T V103S R127N F134M Y165L K198E",8
"lib1","SARS-CoV-2","CACACAGTTCAGCTAA",7,193.52,7.49,-3.28,0.18,1.5,1.15,0.01,">1 nonsynonymous","D90I Y175S",2
"lib1","SARS-CoV-2","CACACATACATAACAC",5,1.41,NA,NA,NA,NA,NA,NA,"stop","S29A K128L F134*",3
"lib1","SARS-CoV-2","CACACATATCCTATAA",1,7.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V W23L F99N F126L E154P",5
"lib1","SARS-CoV-2","CACACATATTAACAAT",10,31.53,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D34I D68A K114Q",3
"lib1","SARS-CoV-2","CACACATCGACTCTAT",1,5.35,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","G74S W106R R124L",3
"lib1","SARS-CoV-2","CACACATCGATATAAA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T D34T G101A D112K K128Y E135S",6
"lib1","SARS-CoV-2","CACACATTAAAAAGCG",1,43.53,10.81,0.05,0.07,2.92,1.05,0,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","CACACATTCAACCGAA",4,36.64,8.71,-2.06,0.16,2.17,1.06,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","CACACATTTCCTCATC",4,99.35,10.2,-0.56,0.08,2.88,1,0,">1 nonsynonymous","C6V S29D",2
"lib1","SARS-CoV-2","CACACCAATAAAATAC",8,29.68,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V37C Y50S L162A",3
"lib1","SARS-CoV-2","CACACCAGAATAAATC",3,0,NA,NA,NA,NA,NA,NA,"stop","A18R V77*",2
"lib1","SARS-CoV-2","CACACCAGCAAGCAAT",1,44.64,10.07,-0.69,0.12,2.3,1.01,0.01,"1 nonsynonymous","Q84W",1
"lib1","SARS-CoV-2","CACACCAGTGATCACC",3,65.75,10.75,-0.01,0.04,2.89,1.02,0,">1 nonsynonymous","N64R E154S",2
"lib1","SARS-CoV-2","CACACCATGCAAGACT",3,35.04,6.27,-4.49,0.4,1.5,1.19,0.01,">1 nonsynonymous","F12Q D59F D97P K199F",4
"lib1","SARS-CoV-2","CACACCCAACACCAAA",5,63.43,6.15,-4.62,0.69,1.5,1.15,0.01,">1 nonsynonymous","I28K V103M",2
"lib1","SARS-CoV-2","CACACCCATAAACTCA",9,66.67,9.5,-1.27,0.05,2.82,1.05,0,">1 nonsynonymous","P149M T170Y",2
"lib1","SARS-CoV-2","CACACCCATTGATCAC",1,0.79,NA,NA,NA,NA,NA,NA,"stop","A22K N118F R124T C158H Y175*",5
"lib1","SARS-CoV-2","CACACCCCAACAGAGT",5,42.56,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","G101M",1
"lib1","SARS-CoV-2","CACACCCCAGCCTTGA",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R Y91M",2
"lib1","SARS-CoV-2","CACACCCCCATCATAT",6,37.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S41T N92P K128S",3
"lib1","SARS-CoV-2","CACACCCTAGGCGACC",3,30.48,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C61G R124G S139G T148F F156M",5
"lib1","SARS-CoV-2","CACACCCTGACTGGCG",3,4.07,NA,NA,NA,NA,NA,NA,"stop","G9Q K56*",2
"lib1","SARS-CoV-2","CACACCGAGAAAAACA",4,20.28,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L5M C49Q Y93T I142Q",4
"lib1","SARS-CoV-2","CACACCGAGAGAACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A22V N107T V181*",3
"lib1","SARS-CoV-2","CACACCGATGGCAGCT",6,44.6,10.67,-0.09,0.06,2.9,1.08,0,"1 nonsynonymous","K132I",1
"lib1","SARS-CoV-2","CACACCGCTTCAAAAT",3,99.03,9.35,-1.42,0.13,1.8,1.17,0.01,">1 nonsynonymous","W106L Y178T",2
"lib1","SARS-CoV-2","CACACCTAATTCACGT",3,51.17,10.68,-0.08,0.04,2.93,1.06,0,">1 nonsynonymous","N4D V37Y",2
"lib1","SARS-CoV-2","CACACCTCTTGCTATT",1,8.27,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6V R16I G86F N130G I142N",5
"lib1","SARS-CoV-2","CACACCTGTATTATAT",1,24.95,7.24,-3.52,0.41,1.5,1.07,0.05,">1 nonsynonymous","I88K S200P",2
"lib1","SARS-CoV-2","CACACCTTAATCTTGT",1,16.68,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","L38V D90G Y143K",3
"lib1","SARS-CoV-2","CACACCTTATGGTCAC",2,37.49,6,-4.76,2,3,1.21,0,">1 nonsynonymous","R73D A81R D98G N107M",4
"lib1","SARS-CoV-2","CACACCTTATTCAGTA",4,1.33,NA,NA,NA,NA,NA,NA,"stop","S113V V181*",2
"lib1","SARS-CoV-2","CACACCTTGGCTATAC",9,108.2,9.22,-1.54,0.15,1.94,1.09,0.01,">1 nonsynonymous","D90L Q144I",2
"lib1","SARS-CoV-2","CACACGAAACTTCACA",3,25.24,10.68,-0.09,0.05,2.9,1.06,0,">1 nonsynonymous","L162V N171F S184Y",3
"lib1","SARS-CoV-2","CACACGAAAGGGGCCA",4,29.41,10.8,0.03,0.06,2.96,1.01,0,"1 nonsynonymous","V153N",1
"lib1","SARS-CoV-2","CACACGAACGGACAAT",10,59.4,10.23,-0.53,0.07,2.73,1.06,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","CACACGAACTACAAAC",2,24.66,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A42Q L57V G83F P161K Q168A",5
"lib1","SARS-CoV-2","CACACGAATACCGTAT",2,22.77,6.62,-4.14,0.3,1.8,1.13,0.01,">1 nonsynonymous","T3M L5I P133A G146S Q176K",5
"lib1","SARS-CoV-2","CACACGAATCACAATT",1,8.51,9.81,-0.95,0.2,1.98,1.1,0.01,">1 nonsynonymous","Y66L D90V",2
"lib1","SARS-CoV-2","CACACGACACGATGCC",2,21.71,10.43,-0.33,0.1,2.89,1.04,0,">1 nonsynonymous","N4S Q84N",2
"lib1","SARS-CoV-2","CACACGATGAAGTTAT",4,16.22,6,-4.76,2,3,1.05,0,">1 nonsynonymous","V103S I142Y P149L",3
"lib1","SARS-CoV-2","CACACGCAGCGGGTCT",9,5.46,NA,NA,NA,NA,NA,NA,"stop","T15* L183E T201G",3
"lib1","SARS-CoV-2","CACACGCCCAAAGCCG",3,31.57,6.95,-3.81,0.23,1.5,1.15,0.01,">1 nonsynonymous","T3H S43G T63Y N107E N120L P197T",6
"lib1","SARS-CoV-2","CACACGCGGTATTACA",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71P A81F",2
"lib1","SARS-CoV-2","CACACGGCACCGACTA",1,78.85,7.11,-3.65,0.29,1.5,1.15,0.02,"1 nonsynonymous","R179A",1
"lib1","SARS-CoV-2","CACACGGCACTTTAGA",2,17.98,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L5K F12M S41M W106L Q176L",5
"lib1","SARS-CoV-2","CACACGGCTATCATAA",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G I72R",2
"lib1","SARS-CoV-2","CACACGGGGCCAGTAA",3,24.6,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P54K A89L Y165H K199H",4
"lib1","SARS-CoV-2","CACACGTAAGAAAGCT",5,48.13,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N107R N157C T201S",3
"lib1","SARS-CoV-2","CACACGTAATATATGA",2,73.68,8.13,-2.64,0.17,1.74,1.13,0.01,">1 nonsynonymous","K56S G117C Y178S",3
"lib1","SARS-CoV-2","CACACGTACGTTACAT",5,10.69,6.13,-4.63,1.02,1.5,1.15,0.03,">1 nonsynonymous","C6L A14S S41K F167L",4
"lib1","SARS-CoV-2","CACACGTCACACCCAC",2,38.91,10.76,0,0.06,2.99,1.01,0,"1 nonsynonymous","A22Q",1
"lib1","SARS-CoV-2","CACACGTGGATACTAA",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72R Y119S",2
"lib1","SARS-CoV-2","CACACGTTACGCGCGT",13,205.16,8.24,-2.53,0.17,1.87,1.1,0.01,">1 nonsynonymous","T85L S113V",2
"lib1","SARS-CoV-2","CACACGTTGAATGCAA",1,21.71,9.92,-0.84,0.15,2.49,1.05,0.01,">1 nonsynonymous","L60E V77L A105T",3
"lib1","SARS-CoV-2","CACACGTTTATTTTAC",1,33.25,10.54,-0.23,0.05,2.94,1,0,">1 nonsynonymous","K87F V115Y",2
"lib1","SARS-CoV-2","CACACTAAAAATACAG",4,117.03,10.05,-0.71,0.07,2.06,1.05,0,">1 nonsynonymous","F44S N58L N64T N109R",4
"lib1","SARS-CoV-2","CACACTAAGCATAAAA",5,64.18,6.63,-4.13,0.54,1.5,1.11,0.04,">1 nonsynonymous","V32E P161L G174E",3
"lib1","SARS-CoV-2","CACACTAAGGGGTTAT",6,87.48,10.14,-0.62,0.08,2.64,1.02,0,">1 nonsynonymous","N1M C31F",2
"lib1","SARS-CoV-2","CACACTAAGTAAGTCT",8,118.75,9.88,-0.88,0.06,2.41,1.05,0,">1 nonsynonymous","F44L I104L R127K",3
"lib1","SARS-CoV-2","CACACTACGTACATTT",8,89.41,10.83,0.07,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACACTACTAAATTTA",6,85.57,10.75,-0.02,0.07,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CACACTAGAATAGAAT",6,86.64,10.01,-0.76,0.09,2.44,1.02,0,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","CACACTAGATTATTCA",6,53.68,9.88,-0.88,0.14,2.05,1.04,0.01,">1 nonsynonymous","Q79T Q84H",2
"lib1","SARS-CoV-2","CACACTAGGCATAAGC",5,125.08,10.7,-0.06,0.04,2.85,1.02,0,">1 nonsynonymous","L5G S36V D59Q N151R",4
"lib1","SARS-CoV-2","CACACTATCATCGCAT",1,33.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19L C61K V71G N118V Q168F",5
"lib1","SARS-CoV-2","CACACTATTTCAGTAG",4,70.15,10.72,-0.04,0.06,2.89,1.07,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","CACACTCAAAAAGCCG",5,56.45,8.23,-2.53,0.14,2.27,1.07,0.01,">1 nonsynonymous","A42G S113P",2
"lib1","SARS-CoV-2","CACACTCAAATCTTAC",6,47.3,10.63,-0.13,0.06,2.91,1.07,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","CACACTCATAATAAAA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","L60A Y93R F99* S129L S200N",5
"lib1","SARS-CoV-2","CACACTCCGTTATTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D68R K87G I142*",3
"lib1","SARS-CoV-2","CACACTCGATCCCGAG",5,30.3,10.62,-0.14,0.06,2.84,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CACACTCTAAACTATA",5,112.63,10.23,-0.53,0.06,2.78,1.02,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","CACACTCTCAGTCAAA",6,45.49,6,-4.76,2,3,1.18,0,">1 nonsynonymous","D90P L122D",2
"lib1","SARS-CoV-2","CACACTCTGTACTCGG",4,22.17,6.21,-4.55,0.7,1.5,1.09,0.03,">1 nonsynonymous","F99N E154T K198M",3
"lib1","SARS-CoV-2","CACACTGAATCCCCAT",1,5.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E154Q T170R Y178T",3
"lib1","SARS-CoV-2","CACACTGACGATAGGA",1,4.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174K",1
"lib1","SARS-CoV-2","CACACTGATTGTCAGG",5,144.67,10.49,-0.28,0.03,2.93,1.02,0,">1 nonsynonymous","F160A L183F",2
"lib1","SARS-CoV-2","CACACTGCAAGCGACG",4,29.4,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","L60G P149W R179A",3
"lib1","SARS-CoV-2","CACACTGCAAGCTGGT",2,569.99,10.62,-0.14,0.04,2.89,1.03,0,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","CACACTGCACAGGTAC",4,30.36,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L60V C150E",2
"lib1","SARS-CoV-2","CACACTGCAGAAGGTG",4,46.4,10.46,-0.31,0.04,2.95,1.02,0,">1 nonsynonymous","F44E T201M",2
"lib1","SARS-CoV-2","CACACTGGAAAGAACA",3,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T T15R K87I T140K Y178K",5
"lib1","SARS-CoV-2","CACACTGGTGACCTAT",11,118.67,6,-4.76,1.35,1.5,1.22,0.03,">1 nonsynonymous","V20L F126Y",2
"lib1","SARS-CoV-2","CACACTGTGACTTTCT",3,84.71,10.64,-0.12,0.05,2.91,1.04,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","CACACTGTGTGTAAAA",8,0.74,NA,NA,NA,NA,NA,NA,"stop","F99K W106* G117* S139M",4
"lib1","SARS-CoV-2","CACACTGTTTGAAGAC",6,91.87,10.72,-0.04,0.07,2.83,1,0,">1 nonsynonymous","L5Y C61A",2
"lib1","SARS-CoV-2","CACACTTAACTGCCGT",2,19.78,10.85,0.09,0.09,2.93,1.03,0,">1 nonsynonymous","S36R N110Q",2
"lib1","SARS-CoV-2","CACACTTAAGGCAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43Y L60*",2
"lib1","SARS-CoV-2","CACACTTCCCATGGGA",2,16.46,10.55,-0.22,0.07,2.85,1.08,0,">1 nonsynonymous","F62T F134S",2
"lib1","SARS-CoV-2","CACACTTCCGCTAAAC",2,0.47,NA,NA,NA,NA,NA,NA,"stop","A105D N130* S139A",3
"lib1","SARS-CoV-2","CACACTTGAGGTGGAG",1,6.23,6,-4.76,2,1.5,1.05,0.02,">1 nonsynonymous","L5Q F12E S43H F134H N151P R179S",6
"lib1","SARS-CoV-2","CACACTTGCCTCAATT",6,124.08,10.48,-0.29,0.05,2.85,1.06,0,">1 nonsynonymous","S41Y E141R",2
"lib1","SARS-CoV-2","CACACTTGTAGATCCA",3,79.07,9.04,-1.73,0.11,2.64,1.18,0,">1 nonsynonymous","Q144R N157S",2
"lib1","SARS-CoV-2","CACACTTTATCCCAAT",8,108.57,10.82,0.05,0.08,2.92,1.05,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","CACACTTTGGCAACAA",3,33.81,9.61,-1.15,0.16,1.86,1.15,0.01,">1 nonsynonymous","D68Y A190S",2
"lib1","SARS-CoV-2","CACACTTTTGTTAGCA",8,69.49,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","P82S R136Y Q144H F156C G174R V181N",6
"lib1","SARS-CoV-2","CACAGAAAAAATAGCC",5,164.84,10.7,-0.06,0.04,2.9,1.03,0,">1 nonsynonymous","L5K K56G T140V",3
"lib1","SARS-CoV-2","CACAGAAAAACACCCA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C A33H L57R Y91S G146P",5
"lib1","SARS-CoV-2","CACAGAAAAATTAACC",2,6.67,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V103Y N120C",2
"lib1","SARS-CoV-2","CACAGAAAAGTCGGCG",1,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","CACAGAAAATTGCCAT",8,0.42,NA,NA,NA,NA,NA,NA,"stop","V20M A89* E154N",3
"lib1","SARS-CoV-2","CACAGAAACCGAGAGG",1,26.06,10.75,-0.01,0.06,2.91,1,0,"1 nonsynonymous","N110P",1
"lib1","SARS-CoV-2","CACAGAAACTTACACT",6,32.95,10.72,-0.05,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAGAAATACACTTA",5,33.32,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55A V65R V77M N110T Y121V",5
"lib1","SARS-CoV-2","CACAGAAATGGGTGAA",7,125.56,10.15,-0.61,0.06,2.64,1.02,0,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","CACAGAACCTTTTTAA",8,3.61,NA,NA,NA,NA,NA,NA,"stop","S41* K56W V71* L122S",4
"lib1","SARS-CoV-2","CACAGAACTGGTGGAA",1,11.2,10.05,-0.71,0.17,2.59,1.07,0.01,">1 nonsynonymous","R16G Y35A",2
"lib1","SARS-CoV-2","CACAGAAGCGGTATTT",1,2.58,NA,NA,NA,NA,NA,NA,"stop","P7* D59R G116A P133S",4
"lib1","SARS-CoV-2","CACAGAAGCTACAAAT",1,8.59,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","T55P I104A K114R F167C",4
"lib1","SARS-CoV-2","CACAGAATAACCCATT",1,16.49,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R27G T55D R78T R179S",4
"lib1","SARS-CoV-2","CACAGAATCAAAAGAT",2,30.49,10.84,0.08,0.1,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CACAGAATTTAATGAA",3,22.6,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","L5M S36I F47S D98K S108T",5
"lib1","SARS-CoV-2","CACAGACAGCTAGTAC",3,35.36,10.19,-0.57,0.15,2.19,1.02,0.01,">1 nonsynonymous","S43F P133R",2
"lib1","SARS-CoV-2","CACAGACATATGGTCA",1,5.73,10.6,-0.17,0.08,2.92,1.09,0,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","CACAGACCACATCAAG",1,27.71,8.67,-2.09,0.11,2.72,1.08,0,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","CACAGACCCGCCATCC",16,216.65,9.54,-1.23,0.15,1.72,1.13,0.01,">1 nonsynonymous","L5N S36H P133I",3
"lib1","SARS-CoV-2","CACAGACGAGGCGGAT",2,17.28,6,-4.76,1.57,1.5,1.24,0.06,"1 nonsynonymous","A105D",1
"lib1","SARS-CoV-2","CACAGACTTTGATATG",1,78.76,10.75,-0.02,0.06,2.88,1.04,0,"1 nonsynonymous","F160T",1
"lib1","SARS-CoV-2","CACAGAGAACACATAA",3,94.64,10.59,-0.17,0.02,2.97,1,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","CACAGAGAGAAACGCT",3,53.54,6,-4.76,1,1.5,1.22,0.02,">1 nonsynonymous","T3Q F167D",2
"lib1","SARS-CoV-2","CACAGAGAGCCAATAT",4,41.73,9.06,-1.7,0.32,1.5,1,0.05,">1 nonsynonymous","F44E G51F",2
"lib1","SARS-CoV-2","CACAGAGCAAGACCGC",2,135.17,10.76,-0.01,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAGAGCTAACATAT",5,26.82,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F44I G51V V77L F99R Q163S",5
"lib1","SARS-CoV-2","CACAGAGGACGCAAAT",5,140.86,10.89,0.13,0.08,2.9,1.05,0,">1 nonsynonymous","A18P P149H N171W",3
"lib1","SARS-CoV-2","CACAGAGGAGTACAGG",1,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D98H L162H",3
"lib1","SARS-CoV-2","CACAGAGGTCACAGCG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","P7* A67C Y91W",3
"lib1","SARS-CoV-2","CACAGAGTAGACAAAA",5,48.8,10.79,0.02,0.09,2.88,1.07,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","CACAGATAAGGAAAAT",4,785.7,9.49,-1.28,0.06,2.85,1.07,0,">1 nonsynonymous","Y119S R136Q",2
"lib1","SARS-CoV-2","CACAGATCTACAATGC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A18L D90N P96* G146Q",4
"lib1","SARS-CoV-2","CACAGATGAAGAGATG",8,37.73,9.27,-1.5,0.24,1.5,1,0.03,">1 nonsynonymous","L5R S45L P54A K56N F62E",5
"lib1","SARS-CoV-2","CACAGATTGGTCAAGA",3,2.13,NA,NA,NA,NA,NA,NA,"stop","V32* C61Y D68L N107S",4
"lib1","SARS-CoV-2","CACAGATTTCATGAAC",4,55.45,8.67,-2.1,0.1,2.56,1.07,0,">1 nonsynonymous","R16S S41M K87D D98T T140I",5
"lib1","SARS-CoV-2","CACAGCAAAAGAGCTA",2,14.98,9.23,-1.54,0.13,2.59,1.05,0.01,">1 nonsynonymous","K56R Y91T S129T",3
"lib1","SARS-CoV-2","CACAGCAAGACGAGGT",3,38.38,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","F62R P96T T140S P177N",4
"lib1","SARS-CoV-2","CACAGCAATCCAGCGA",1,8.89,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","A22N S69K N107P Y159A P177N",5
"lib1","SARS-CoV-2","CACAGCACACTGATCT",3,55.92,10.5,-0.26,0.04,2.96,1.01,0,">1 nonsynonymous","I2Q N64F A145G S200A",4
"lib1","SARS-CoV-2","CACAGCAGAACGACAG",2,51.81,10.82,0.05,0.08,2.84,1.08,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","CACAGCAGAATCTTTG",6,29.62,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T3E R16D Y50T N107K R136L K198Q",6
"lib1","SARS-CoV-2","CACAGCATTATCTGCG",8,92.87,7.15,-3.61,0.44,1.5,1.1,0.06,">1 nonsynonymous","L5E V11L K48P Q176T K199E",5
"lib1","SARS-CoV-2","CACAGCATTTCCATCA",4,39.59,8.43,-2.34,0.21,1.5,1,0.03,">1 nonsynonymous","F12S V181T",2
"lib1","SARS-CoV-2","CACAGCATTTCTTGAT",9,165.64,10.02,-0.74,0.11,2.28,1.02,0,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","CACAGCCAAGATAATT",2,14.39,9.71,-1.06,0.17,1.78,1.05,0.01,">1 nonsynonymous","L5D K94L",2
"lib1","SARS-CoV-2","CACAGCCACCCACTTA",1,14.53,9.82,-0.94,0.24,2.12,1.01,0.02,">1 nonsynonymous","I2P R27Y F134D E141M",4
"lib1","SARS-CoV-2","CACAGCCCAAAGACGT",6,54.2,6.66,-4.1,0.4,1.5,1.3,0.02,">1 nonsynonymous","C6K I88L",2
"lib1","SARS-CoV-2","CACAGCCGCCGACGTC",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G I88L V103N",3
"lib1","SARS-CoV-2","CACAGCGACCATATAA",5,5.03,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T85N P96Y",2
"lib1","SARS-CoV-2","CACAGCGACTATCTAA",4,29.53,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S19R V71L S164I Y178K",4
"lib1","SARS-CoV-2","CACAGCGGGGGCGGAT",2,7.24,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F62H D97M N107E C158R",4
"lib1","SARS-CoV-2","CACAGCGTCTTATTTT",1,5.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R A33S T201L",3
"lib1","SARS-CoV-2","CACAGCGTGCGCACTA",8,36.18,6,-4.76,1.73,1.5,1.18,0.02,">1 nonsynonymous","C102T K132Y",2
"lib1","SARS-CoV-2","CACAGCTAACCAGTCA",1,3.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4I",1
"lib1","SARS-CoV-2","CACAGCTAGTATCAAA",5,44.17,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","C6V Y35A F62P E135P Y143S G152S",6
"lib1","SARS-CoV-2","CACAGCTGACAAATAG",6,60.83,8.33,-2.44,0.12,2.29,1.11,0.01,">1 nonsynonymous","T140L G146V",2
"lib1","SARS-CoV-2","CACAGCTGCACATGCA",2,5.26,10.35,-0.42,0.05,3,1,0,">1 nonsynonymous","C61W F160W",2
"lib1","SARS-CoV-2","CACAGCTTTACTAGGA",6,58.79,9.9,-0.87,0.09,2.19,1.04,0,">1 nonsynonymous","T85D R136S",2
"lib1","SARS-CoV-2","CACAGGAAAGACTGAT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","G51M L95*",2
"lib1","SARS-CoV-2","CACAGGAAATAATTCG",11,42.1,6.41,-4.35,0.46,1.5,1.17,0.01,">1 nonsynonymous","I2D Y91S F99L I104R",4
"lib1","SARS-CoV-2","CACAGGAACAGCTAAC",3,30.95,10.55,-0.21,0.07,2.73,1,0,">1 nonsynonymous","T15R G116K",2
"lib1","SARS-CoV-2","CACAGGAATTTGACAA",1,3.1,NA,NA,NA,NA,NA,NA,"stop","I2* K87N K94L Q176V",4
"lib1","SARS-CoV-2","CACAGGACATAGCCCT",6,76.92,10.48,-0.29,0.04,2.9,1.07,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","CACAGGACGCTCTAAA",5,112.76,10.2,-0.56,0.06,2.83,1,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","CACAGGACTTCGACCG",2,6.14,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","R16D N92W",2
"lib1","SARS-CoV-2","CACAGGAGAACAAGTG",3,43.06,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","E10T A18E F99E G116K K199S",5
"lib1","SARS-CoV-2","CACAGGAGGTAACTAT",10,42.08,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C31F C49V",2
"lib1","SARS-CoV-2","CACAGGATATATTAAA",1,22,10.71,-0.05,0.07,2.9,1.07,0,"1 nonsynonymous","N1C",1
"lib1","SARS-CoV-2","CACAGGATTGCTATAA",7,41.44,7.25,-3.51,0.36,1.5,1.15,0.02,">1 nonsynonymous","N107M R136L P191T",3
"lib1","SARS-CoV-2","CACAGGCTGGTTAACT",5,2.52,NA,NA,NA,NA,NA,NA,"stop","L38P N107* T201A",3
"lib1","SARS-CoV-2","CACAGGGAATCTCACT",2,40.37,6.5,-4.26,0.36,1.5,1.16,0.01,">1 nonsynonymous","D90R T100P",2
"lib1","SARS-CoV-2","CACAGGGCAAGAAAAT",3,19.34,10.35,-0.42,0.07,2.93,1.05,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","CACAGGTAGGGTTAAT",4,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90N P177C",2
"lib1","SARS-CoV-2","CACAGGTATGACAGAA",1,10.47,8.77,-1.99,0.27,1.63,1.07,0.02,">1 nonsynonymous","N30V Y91W S147A",3
"lib1","SARS-CoV-2","CACAGGTCACGAACGA",1,108.74,7.7,-3.07,0.25,1.5,1.08,0.02,">1 nonsynonymous","Y121W N157H S164A",3
"lib1","SARS-CoV-2","CACAGGTCTATCAACT",3,26.51,10.67,-0.1,0.11,2.88,1.04,0,">1 nonsynonymous","N1V L60M Q168A",3
"lib1","SARS-CoV-2","CACAGGTGATTATTAT",3,16.19,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K26P T85F D112R",3
"lib1","SARS-CoV-2","CACAGGTGATTCACCG",8,104.42,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D59R F70I S129C",3
"lib1","SARS-CoV-2","CACAGGTTCTAGATTG",3,100.12,10.67,-0.09,0.06,2.93,1.03,0,">1 nonsynonymous","S45T K132A",2
"lib1","SARS-CoV-2","CACAGGTTTCCAGCAG",3,34.36,10.51,-0.25,0.06,2.85,1.01,0,">1 nonsynonymous","N1K K26Q N64R K198D",4
"lib1","SARS-CoV-2","CACAGTAACCTGACGT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","CACAGTAACTGCGTAG",10,114.41,7.66,-3.1,0.12,1.73,1.15,0.01,">1 nonsynonymous","D90N T100L C158S",3
"lib1","SARS-CoV-2","CACAGTAGATAAGATA",7,329.98,8.88,-1.89,0.06,2.84,1.11,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","CACAGTAGTCACCATT",2,12.42,10.01,-0.76,0.18,2.72,1.07,0.01,">1 nonsynonymous","A81R K128V",2
"lib1","SARS-CoV-2","CACAGTATGAAATCGT",2,28.25,8.26,-2.5,0.22,2,1.09,0.03,">1 nonsynonymous","A33D G117E",2
"lib1","SARS-CoV-2","CACAGTATTAAAATGC",5,28.44,10.77,0.01,0.08,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAGTATTAGCATGG",4,48.64,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L57S F156K G172W",3
"lib1","SARS-CoV-2","CACAGTATTGTCTTTA",2,27.24,6,-4.76,2,2.5,1.18,0.01,">1 nonsynonymous","S29T K94G R124S G166P",4
"lib1","SARS-CoV-2","CACAGTCAAATAATTG",2,25.75,10.05,-0.72,0.08,2.92,1,0,">1 nonsynonymous","A105S A145I",2
"lib1","SARS-CoV-2","CACAGTCAACTTCAAT",10,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D V52M L131T Q144F V173P",5
"lib1","SARS-CoV-2","CACAGTCAAGAACAGA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","S43* C61H V103H",3
"lib1","SARS-CoV-2","CACAGTCATTACGCGC",2,2.49,NA,NA,NA,NA,NA,NA,"stop","E10V Y119* T148G E154Y",4
"lib1","SARS-CoV-2","CACAGTCTGCAAACGG",2,20.98,10.8,0.04,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAGTGAAACAACAG",9,57.6,10.77,0.01,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACAGTGACCACTTGT",2,26.69,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","G83P E141V",2
"lib1","SARS-CoV-2","CACAGTGCTCATTTAT",3,7.36,9.88,-0.89,0.1,2.56,1,0.01,">1 nonsynonymous","K26W S41L C61S",3
"lib1","SARS-CoV-2","CACAGTGCTGTTAATC",3,14.85,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","R25S G86R I138V",3
"lib1","SARS-CoV-2","CACAGTGTCTACAATT",9,4.91,NA,NA,NA,NA,NA,NA,"stop","V11L F17* L57F F167T",4
"lib1","SARS-CoV-2","CACAGTGTTGAACAAG",6,69.41,9.63,-1.13,0.13,2.23,1.1,0,">1 nonsynonymous","S45F S147C",2
"lib1","SARS-CoV-2","CACAGTGTTTGCCAAG",9,142.68,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G83D Q176V",2
"lib1","SARS-CoV-2","CACAGTTAAAGCCAAG",6,72.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F167D L188H",2
"lib1","SARS-CoV-2","CACAGTTAAATTTTGT",3,15.12,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V103M P133H G152V",3
"lib1","SARS-CoV-2","CACAGTTATCCGGCCT",1,30.35,10.6,-0.16,0.05,2.93,1.01,0,"1 nonsynonymous","S184F",1
"lib1","SARS-CoV-2","CACAGTTATTCACTCG",5,7.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D T100K L183S",3
"lib1","SARS-CoV-2","CACAGTTGTTAAGCAT",4,19.07,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","S19E D98V V103T",3
"lib1","SARS-CoV-2","CACATAAAAATGAAAA",4,1.2,NA,NA,NA,NA,NA,NA,"stop","R136* Y165L",2
"lib1","SARS-CoV-2","CACATAAAACGAACCT",4,65.4,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G86N T140L G146K",3
"lib1","SARS-CoV-2","CACATAAAATCAACCC",2,51.25,10.69,-0.07,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACATAAACAAAAAAA",2,31.5,10.71,-0.06,0.05,2.96,1.02,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","CACATAAACAGTTAAC",4,124.47,10.37,-0.4,0.04,2.88,1.02,0,"1 nonsynonymous","N118E",1
"lib1","SARS-CoV-2","CACATAAAGATTGTGA",2,29.48,7.52,-3.25,0.15,1.52,1.14,0.02,">1 nonsynonymous","D98G G117L S139H G166K",4
"lib1","SARS-CoV-2","CACATAAAGTCCAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L F8T R16T W106S",4
"lib1","SARS-CoV-2","CACATAAATATACGAC",4,7.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q A33N K56W Q84H A89F Q144P R179L",7
"lib1","SARS-CoV-2","CACATAAATGCAAAAT",1,35.36,6,-4.76,0.93,1.5,1.12,0.02,">1 nonsynonymous","Y50S L131G P169C",3
"lib1","SARS-CoV-2","CACATAAATTATAATT",1,138.61,7.84,-2.93,0.11,1.5,1.12,0,">1 nonsynonymous","G9T N58L Q176S",3
"lib1","SARS-CoV-2","CACATAAATTGCACTA",2,34.18,10.68,-0.09,0.1,2.91,1.07,0,">1 nonsynonymous","D98T P197K",2
"lib1","SARS-CoV-2","CACATAACCAATGCAA",8,633.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33Y L38W F62P V71K Y93T K198T",6
"lib1","SARS-CoV-2","CACATAACCGGCGTTT",7,37.31,8.77,-1.99,0.2,2.09,1.11,0.02,">1 nonsynonymous","N107V I142L",2
"lib1","SARS-CoV-2","CACATAACCTCGCAAG",2,26.73,9.96,-0.8,0.12,1.96,1.12,0.01,">1 nonsynonymous","F47S G83R",2
"lib1","SARS-CoV-2","CACATAACTAATACTG",2,15.56,6,-4.76,0.98,3,1.09,0,">1 nonsynonymous","N13Y K87E A105S Y165F",4
"lib1","SARS-CoV-2","CACATAAGTCAGAGGC",2,1.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CACATAATCACAACAG",4,99.05,8.97,-1.79,0.07,2.79,1.07,0,">1 nonsynonymous","Y143V T148N E154G",3
"lib1","SARS-CoV-2","CACATAATGAGTGAAG",10,114.35,10.74,-0.03,0.05,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CACATAATGCAAATAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","CACATAATGTCACACA",7,1.11,NA,NA,NA,NA,NA,NA,"stop","D75L A89S V103L Y119L S129*",5
"lib1","SARS-CoV-2","CACATAATTTCCGACA",9,125.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V32K Y39P G146A P149C Q176F",5
"lib1","SARS-CoV-2","CACATACAAGTCAGTC",7,89.39,10.74,-0.02,0.08,2.9,1.04,0,">1 nonsynonymous","D75S S129T",2
"lib1","SARS-CoV-2","CACATACACCGACATT",2,40.18,10.05,-0.71,0.12,2.53,1,0.01,">1 nonsynonymous","I2G G9I N58F K198E",4
"lib1","SARS-CoV-2","CACATACATTCACCAA",12,4.55,NA,NA,NA,NA,NA,NA,"stop","F12* V77Q G196K",3
"lib1","SARS-CoV-2","CACATACCAAGGTGAA",2,43.19,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S41W L57I Y119C T170L V173T",5
"lib1","SARS-CoV-2","CACATACCACTTACCG",1,23.16,9.26,-1.51,0.39,2.04,1.07,0.04,">1 nonsynonymous","N118L N171I",2
"lib1","SARS-CoV-2","CACATACCATGACCTA",8,25.07,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","A14E A33F K56L F99C R136C A145N N151L",7
"lib1","SARS-CoV-2","CACATACCCATTCATA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","T85V L95K N120K D137W S184*",5
"lib1","SARS-CoV-2","CACATACCCCCCAGCT",4,75.76,10.79,0.03,0.08,2.92,1.05,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","CACATACGAAAAAAGG",8,37.16,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5Q F12Y L95Y",3
"lib1","SARS-CoV-2","CACATACGTAGGCCAT",2,18.06,8.7,-2.07,0.3,1.5,1,0.05,">1 nonsynonymous","G51Y D90Y T201W",3
"lib1","SARS-CoV-2","CACATACTGTCTCCTT",7,71.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14S Y50I K56P Y91S N107L G117F",6
"lib1","SARS-CoV-2","CACATAGACACTATTG",1,8.2,10.28,-0.49,0.12,2.95,1,0.01,">1 nonsynonymous","R78K D98V T140M",3
"lib1","SARS-CoV-2","CACATAGACCCGATAA",1,14.52,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F12N F126T I138A",3
"lib1","SARS-CoV-2","CACATAGGATCTTAAC",3,5.03,NA,NA,NA,NA,NA,NA,"stop","L57R S108M N120* F160D Y178N",5
"lib1","SARS-CoV-2","CACATAGGGAAATAGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183R",1
"lib1","SARS-CoV-2","CACATAGTAAATTGCA",3,35.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L95D Y175R F185L",3
"lib1","SARS-CoV-2","CACATAGTAGCTGGTT",2,22.28,10.26,-0.51,0.1,2.87,1.02,0.01,">1 nonsynonymous","T3L F156V",2
"lib1","SARS-CoV-2","CACATAGTCACAACTG",1,18.56,10.68,-0.08,0.08,3,1,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","CACATAGTGTCGGCAT",1,5.15,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","L60R V180R T201S",3
"lib1","SARS-CoV-2","CACATAGTTAATATAT",1,13.37,6,-4.76,2,1.5,1.08,0.05,">1 nonsynonymous","Y35G S113D Y175H",3
"lib1","SARS-CoV-2","CACATATATGATGTCT",3,25.44,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y143I F167N",2
"lib1","SARS-CoV-2","CACATATCAGTACCCA",3,58.27,10.63,-0.13,0.08,2.85,1.11,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","CACATATCATCGCTTA",8,37.93,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9T C31T Y35S W106R Y165L",5
"lib1","SARS-CoV-2","CACATATCCGGAACTA",2,24.8,10.74,-0.03,0.04,2.98,1,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","CACATATCTAATTCTG",3,18.2,10.29,-0.47,0.13,2.82,1.11,0.01,">1 nonsynonymous","R16N A105G",2
"lib1","SARS-CoV-2","CACATATGAAATCTTC",7,1.07,NA,NA,NA,NA,NA,NA,"stop","V37* V77G T170C",3
"lib1","SARS-CoV-2","CACATATGAGCTTTCA",5,121.97,10.5,-0.26,0.04,2.9,1.02,0,">1 nonsynonymous","T100E T201L",2
"lib1","SARS-CoV-2","CACATATGTAGCCATA",4,29.69,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A67N R136S",2
"lib1","SARS-CoV-2","CACATATGTGTATGCA",5,60.83,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G86V D98L",2
"lib1","SARS-CoV-2","CACATATTAAACAATC",10,145.72,9.94,-0.83,0.1,2.26,1.06,0,"1 nonsynonymous","L38H",1
"lib1","SARS-CoV-2","CACATATTGGTAAAAA",1,37.26,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P54N D98S F126A S147K Y175L",5
"lib1","SARS-CoV-2","CACATATTGTTCCAAT",4,1.14,NA,NA,NA,NA,NA,NA,"stop","D59R A89* Y175T",3
"lib1","SARS-CoV-2","CACATATTTCTACACA",2,11.05,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G86E N92I V115S Y123K",4
"lib1","SARS-CoV-2","CACATCAAAACCCATC",1,12.62,10.81,0.05,0.1,2.91,1.04,0,">1 nonsynonymous","L5W K132H",2
"lib1","SARS-CoV-2","CACATCAAAAGACATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3K Q84R K114* S147I Q168A V173E",6
"lib1","SARS-CoV-2","CACATCAACTAGAGAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Q84T D90* T170C",3
"lib1","SARS-CoV-2","CACATCAAGAAAACTG",2,0.31,NA,NA,NA,NA,NA,NA,"stop","D59L N107* S129F",3
"lib1","SARS-CoV-2","CACATCAAGATGGGTC",7,22.19,6.2,-4.56,1.09,1.5,1.1,0.08,">1 nonsynonymous","G101V Q168K",2
"lib1","SARS-CoV-2","CACATCAATGTAATCA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","L131V E141T Y165L Y175*",4
"lib1","SARS-CoV-2","CACATCACTAGTATCT",2,55.55,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D112N I138N N171L",3
"lib1","SARS-CoV-2","CACATCAGACTGTAAA",5,19.33,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F17V V37R V65W V77R",4
"lib1","SARS-CoV-2","CACATCAGTAGTATAT",3,157.82,10.61,-0.16,0.05,2.9,1.05,0,">1 nonsynonymous","C61K D90Q N120H",3
"lib1","SARS-CoV-2","CACATCAGTCAACTTG",1,1.32,NA,NA,NA,NA,NA,NA,"stop","N64T T100S Y123*",3
"lib1","SARS-CoV-2","CACATCATAATAGCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10R A22R N110* E141S",4
"lib1","SARS-CoV-2","CACATCATAGTCTATG",2,55.74,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F167S T201S",2
"lib1","SARS-CoV-2","CACATCCAAGTTTGGC",8,66.44,10.8,0.03,0.07,2.92,1.04,0,"1 nonsynonymous","N110A",1
"lib1","SARS-CoV-2","CACATCCCAGGATCCT",5,1.49,NA,NA,NA,NA,NA,NA,"stop","L5Y P149* G166I F185A",4
"lib1","SARS-CoV-2","CACATCCCCACGTGTG",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F S41L I72Y D98E Y165E G172K",6
"lib1","SARS-CoV-2","CACATCCTAGATAGTT",4,0.53,NA,NA,NA,NA,NA,NA,"stop","P96R W106* T170P",3
"lib1","SARS-CoV-2","CACATCCTCTATAGTC",4,80.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S129C C158G",2
"lib1","SARS-CoV-2","CACATCCTGAACGACA",2,63.8,10.52,-0.24,0.06,2.89,1.04,0,"1 nonsynonymous","Y66H",1
"lib1","SARS-CoV-2","CACATCCTTACATGGG",2,79.09,10.73,-0.04,0.04,2.97,1.02,0,"1 nonsynonymous","K132A",1
"lib1","SARS-CoV-2","CACATCCTTCGCGGAC",20,127.32,7.71,-3.06,0.31,1.5,1.13,0.03,">1 nonsynonymous","A81G D137H",2
"lib1","SARS-CoV-2","CACATCGAAACAAACC",1,0.97,NA,NA,NA,NA,NA,NA,"stop","L95W Y119N I142*",3
"lib1","SARS-CoV-2","CACATCGAAATATCTT",1,89.58,10.05,-0.72,0.05,2.59,1.06,0,">1 nonsynonymous","A18S D97S Q176N",3
"lib1","SARS-CoV-2","CACATCGAAATATTAC",4,58.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29E P82R G166S S200W",4
"lib1","SARS-CoV-2","CACATCGAATGTCTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9V N24K A105P S113R K198*",5
"lib1","SARS-CoV-2","CACATCGAATTGTATT",1,27.85,10.12,-0.64,0.11,2.64,1,0.01,"1 nonsynonymous","F134I",1
"lib1","SARS-CoV-2","CACATCGATGATCAAA",3,69.24,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C6L E10D A22R G117R Y175N",5
"lib1","SARS-CoV-2","CACATCGCGTAGCCAC",2,8.17,10.25,-0.52,0.25,2.59,1.16,0.02,">1 nonsynonymous","F160D G196R",2
"lib1","SARS-CoV-2","CACATCGGTACGATCA",2,38.17,6.91,-3.85,0.29,1.5,1.11,0.01,">1 nonsynonymous","L38T D97L Q176H",3
"lib1","SARS-CoV-2","CACATCGTCTCCTTGA",3,50.63,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G9S F47L P82N",3
"lib1","SARS-CoV-2","CACATCGTCTTTATAT",1,21.12,9.98,-0.79,0.11,2.81,1,0.01,"1 nonsynonymous","Y119Q",1
"lib1","SARS-CoV-2","CACATCTAACATCTTG",4,60.62,10.55,-0.21,0.05,2.85,1.09,0,">1 nonsynonymous","S139G T148F",2
"lib1","SARS-CoV-2","CACATCTACAATAACG",8,78.08,9.94,-0.83,0.07,2.04,1.08,0,">1 nonsynonymous","A81I K128N",2
"lib1","SARS-CoV-2","CACATCTATCAGGGAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","L60T I88* P96L D137P P161I Y165W",6
"lib1","SARS-CoV-2","CACATCTCAAGAGTCG",6,79.78,9.52,-1.24,0.15,1.93,1.11,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CACATCTCCAATTGGC",1,113.95,8.4,-2.37,0.12,2.67,1.11,0.01,">1 nonsynonymous","K56T Y159A",2
"lib1","SARS-CoV-2","CACATCTCGAGGTACC",4,83.43,9.24,-1.53,0.16,1.75,1.12,0.01,">1 nonsynonymous","V11A N64S E141L S200C",4
"lib1","SARS-CoV-2","CACATCTCGTCGGAAT",7,81.3,9.89,-0.87,0.08,2.53,1.09,0,">1 nonsynonymous","N107R K132L",2
"lib1","SARS-CoV-2","CACATCTCTACAGCGG",3,13.59,9.74,-1.03,0.19,1.97,1.01,0.01,">1 nonsynonymous","T15C Q84I T140K",3
"lib1","SARS-CoV-2","CACATCTGAGCACACT",4,32.32,10.92,0.15,0.1,2.9,1.07,0,"1 nonsynonymous","P197L",1
"lib1","SARS-CoV-2","CACATCTGCTAATGTC",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G A33F V52Y V103L C158Y",5
"lib1","SARS-CoV-2","CACATCTTCCTGCACT",1,20.3,10.77,0,0.07,2.88,1.08,0,"1 nonsynonymous","S164R",1
"lib1","SARS-CoV-2","CACATCTTTGCAAATA",1,47.99,6.11,-4.65,0.65,2.09,1.16,0.01,">1 nonsynonymous","G117A N157R",2
"lib1","SARS-CoV-2","CACATGAAAAAAAACG",1,1.31,NA,NA,NA,NA,NA,NA,"stop","S41I N58*",2
"lib1","SARS-CoV-2","CACATGAAAACATAAC",3,15.95,6,-4.76,2,2.11,1.13,0.01,">1 nonsynonymous","G9E S53T A67D N107I E154Y",5
"lib1","SARS-CoV-2","CACATGAAACTAGTCG",1,51.56,9.83,-0.93,0.05,2.86,1.07,0,">1 nonsynonymous","G9W K48R Y119R",3
"lib1","SARS-CoV-2","CACATGAAACTATAAC",2,78.31,10.6,-0.16,0.05,2.91,1,0,"1 nonsynonymous","S36F",1
"lib1","SARS-CoV-2","CACATGAAATTCGCGT",7,78.22,8.59,-2.17,0.11,2.9,1.02,0.01,">1 nonsynonymous","K128N Q168K",2
"lib1","SARS-CoV-2","CACATGAAGAGTAACA",4,15.62,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","E76N V103S N109M",3
"lib1","SARS-CoV-2","CACATGAAGTCCTACA",14,141.71,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V11A A18T Q79R S113V G155V Y178L",6
"lib1","SARS-CoV-2","CACATGAATAGAGGAA",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T V77W V103A P149T",4
"lib1","SARS-CoV-2","CACATGACATGATACT",10,60.27,6,-4.76,1.25,1.5,1.18,0.01,">1 nonsynonymous","W23F A89L G117N F126Q S147D Y175F",6
"lib1","SARS-CoV-2","CACATGATATTATGAA",4,40.92,9.96,-0.8,0.12,2.33,1.09,0,"1 nonsynonymous","V20T",1
"lib1","SARS-CoV-2","CACATGATTGCATAAA",12,95.28,8.93,-1.83,0.15,1.6,1.16,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","CACATGCCAACAATTA",2,16.49,8,-2.77,0.33,1.5,1.18,0.03,">1 nonsynonymous","Y50N K56R P149R V173E",4
"lib1","SARS-CoV-2","CACATGCGAATCACTG",8,24.77,9.38,-1.38,0.25,1.5,1.11,0.03,">1 nonsynonymous","Y121K P133I",2
"lib1","SARS-CoV-2","CACATGCGCACCACTT",4,44.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P96Y S113I",2
"lib1","SARS-CoV-2","CACATGGATGAGGTTG",2,43.57,10.07,-0.7,0.06,2.85,1.06,0,">1 nonsynonymous","F44T A67I",2
"lib1","SARS-CoV-2","CACATGGCAGAATCCT",1,24.7,6.76,-4,0.52,1.5,1.24,0.05,">1 nonsynonymous","T46N N107V K132N",3
"lib1","SARS-CoV-2","CACATGGCCCACAGAA",3,25.43,6.23,-4.53,1.59,1.5,1.3,0.05,">1 nonsynonymous","K94Q D98A I104Y E141I",4
"lib1","SARS-CoV-2","CACATGGTAATAAATG",3,14.96,8.77,-1.99,0.1,2.9,1.06,0,">1 nonsynonymous","T15N F126K",2
"lib1","SARS-CoV-2","CACATGGTGACGGCTG",4,32.32,9.5,-1.27,0.35,1.5,1,0.05,">1 nonsynonymous","E10C W106T",2
"lib1","SARS-CoV-2","CACATGGTTCTCAGTG",1,77.45,8.43,-2.33,0.18,3,1,0.01,"1 nonsynonymous","F126S",1
"lib1","SARS-CoV-2","CACATGTAAAAGTTAT",1,23.48,9.99,-0.77,0.12,2.35,1.08,0.01,"1 nonsynonymous","V77C",1
"lib1","SARS-CoV-2","CACATGTAATGATTTA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","CACATGTATGATAAGC",7,126.16,10.76,0,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACATGTGTCGTCACT",5,67.22,10.74,-0.02,0.06,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CACATGTTATTCCATG",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R L57S L122R",3
"lib1","SARS-CoV-2","CACATGTTGAGCTCTC",5,181.33,6.22,-4.54,0.78,1.5,1.18,0.02,">1 nonsynonymous","P7S Y39V N120V Y175K",4
"lib1","SARS-CoV-2","CACATGTTTGAGCTGA",5,23.05,9.39,-1.38,0.32,1.5,1,0.07,">1 nonsynonymous","F99I Y123T Q168F",3
"lib1","SARS-CoV-2","CACATGTTTTCCATTC",1,8.02,6.22,-4.54,2,3,1.1,0.01,">1 nonsynonymous","E10A S41Y P54S A81P D90M E186S",6
"lib1","SARS-CoV-2","CACATTAAAATACGTC",6,12.25,7.09,-3.67,0.22,1.97,1.1,0.01,">1 nonsynonymous","F8M R27M S45L D59S K114G F156K",6
"lib1","SARS-CoV-2","CACATTAAATATAATA",23,177.91,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","K48S G74W G101M",3
"lib1","SARS-CoV-2","CACATTAAATCAGACA",1,73.3,6,-4.76,1.55,1.5,1.15,0.01,">1 nonsynonymous","C31E Y39A Y143A",3
"lib1","SARS-CoV-2","CACATTAAATTCCAAC",1,27.89,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y35V R124S",2
"lib1","SARS-CoV-2","CACATTAACGATGAGG",13,95.36,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A18M C31L N40I N120G Q168I",5
"lib1","SARS-CoV-2","CACATTAAGTTCTGTC",6,31.23,6.24,-4.52,0.75,1.5,1.25,0.02,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","CACATTAATAAATGTG",1,0.09,NA,NA,NA,NA,NA,NA,"stop","P82* S139L",2
"lib1","SARS-CoV-2","CACATTAATTTCAGAA",3,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S19W P82S L95G",4
"lib1","SARS-CoV-2","CACATTACATAGTAAA",2,21.43,10.89,0.12,0.2,2.13,1.04,0.02,">1 nonsynonymous","Y50N P191T K198V",3
"lib1","SARS-CoV-2","CACATTACCAATACTT",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131A L183A",2
"lib1","SARS-CoV-2","CACATTACCTGACAAG",1,38.17,6,-4.76,2,1.5,1.25,0.04,"1 nonsynonymous","C158P",1
"lib1","SARS-CoV-2","CACATTACGCTACTGC",5,49.42,10.68,-0.08,0.05,2.88,1.06,0,">1 nonsynonymous","T46Y N64F",2
"lib1","SARS-CoV-2","CACATTACGTGCACAT",3,1.73,NA,NA,NA,NA,NA,NA,"stop","T15* V20L C61A G152D Y178S",5
"lib1","SARS-CoV-2","CACATTACTAGATTCA",3,85.43,9.17,-1.6,0.11,2.13,1.11,0.01,">1 nonsynonymous","F134E A145C",2
"lib1","SARS-CoV-2","CACATTAGAAATGCAA",3,62.84,10.79,0.03,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACATTAGAATTCCCG",3,62.01,9.56,-1.2,0.14,2.25,1.12,0.01,">1 nonsynonymous","Y39N Y91S",2
"lib1","SARS-CoV-2","CACATTAGGACCATAT",3,1.53,NA,NA,NA,NA,NA,NA,"stop","W23L F70* C102A Q144I",4
"lib1","SARS-CoV-2","CACATTAGTATCTAGC",3,119.04,10.8,0.04,0.07,2.93,1.03,0,"1 nonsynonymous","T100M",1
"lib1","SARS-CoV-2","CACATTATATACTGTA",2,67.2,7.03,-3.73,0.2,1.91,1.2,0.01,">1 nonsynonymous","P149H P161D H189Q T201R",4
"lib1","SARS-CoV-2","CACATTATATCTGATC",10,5.97,10.75,-0.01,0.35,2.22,1.05,0.06,">1 nonsynonymous","S45L T55A E76N A81Q L95Q G101R Y143V",7
"lib1","SARS-CoV-2","CACATTATGATTCACA",3,63.32,7.72,-3.04,0.32,1.5,1.13,0.04,">1 nonsynonymous","Y50R K56I",2
"lib1","SARS-CoV-2","CACATTCAAACACTAG",7,5.89,NA,NA,NA,NA,NA,NA,"stop","N4L V37R G86E Y93* E154P",5
"lib1","SARS-CoV-2","CACATTCAAATCGCTA",9,289.19,10.74,-0.03,0.06,2.9,1.07,0,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","CACATTCAAGAAAATT",1,8,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y35Q A89D T140C",3
"lib1","SARS-CoV-2","CACATTCATAAAATAC",7,67.68,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91R N120F Q144F",3
"lib1","SARS-CoV-2","CACATTCATTTCCCCA",2,22.76,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","T63V S69V R124A G155S V182W",5
"lib1","SARS-CoV-2","CACATTCCAAAAATCA",2,32.77,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","S41P T148P P177V",3
"lib1","SARS-CoV-2","CACATTCCTAAACTGG",2,13.04,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","R25H S69N V77N G155M",4
"lib1","SARS-CoV-2","CACATTCGCTCGCCCT",17,105.99,9.94,-0.82,0.08,1.9,1.08,0,">1 nonsynonymous","V37G T63C D90G",3
"lib1","SARS-CoV-2","CACATTCGTGTCTAAA",2,10.59,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","W23L W106A G117D E141Q N171L",5
"lib1","SARS-CoV-2","CACATTCTAATTTACA",5,69.73,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A33Q G74R L95R S129R T140Q",5
"lib1","SARS-CoV-2","CACATTCTGCCACTCG",2,27.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6D G86M S147Q L162E G172C A190S",6
"lib1","SARS-CoV-2","CACATTCTTGACCGTA",5,45.72,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6W N24S S29T Y119V R124F N151R",6
"lib1","SARS-CoV-2","CACATTTACCAAAATT",10,257.65,8.72,-2.04,0.09,2.43,1.1,0,">1 nonsynonymous","N1D Y121P T148H G174A",4
"lib1","SARS-CoV-2","CACATTTAGATGCTGT",2,15.54,6.34,-4.42,0.67,1.5,1.13,0.03,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","CACATTTAGTGAACGC",4,30.77,6.3,-4.47,0.62,1.5,1.18,0.03,">1 nonsynonymous","D112W T140C T148S N157P",4
"lib1","SARS-CoV-2","CACATTTATTAATGCA",6,13.37,6.06,-4.71,2,1.5,1.12,0.03,">1 nonsynonymous","V52H I104N Q144S P197W",4
"lib1","SARS-CoV-2","CACATTTCAAACCTGT",2,118.57,8.96,-1.8,0.07,2.71,1.13,0,">1 nonsynonymous","T46S D97E I138K N157D",4
"lib1","SARS-CoV-2","CACATTTCCTAGGTCC",9,107.29,9.89,-0.88,0.12,2.34,1.03,0,">1 nonsynonymous","Y123T P149R",2
"lib1","SARS-CoV-2","CACATTTGAGCTTGGA",2,7.71,10.18,-0.58,0.2,2.83,1.17,0.01,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","CACATTTTACGCTTGG",3,70.51,10.66,-0.1,0.06,2.84,1.03,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","CACATTTTATTGGGTA",6,75.85,10.63,-0.13,0.05,2.86,1.07,0,">1 nonsynonymous","E10T T148A",2
"lib1","SARS-CoV-2","CACATTTTTAATACTT",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L D97M G174V",3
"lib1","SARS-CoV-2","CACCAAAAAAATGTTT",4,98.64,10.55,-0.21,0.07,2.92,1.02,0,">1 nonsynonymous","V11I S129R Q144P",3
"lib1","SARS-CoV-2","CACCAAAAAATTAAAA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T15V V65I T201*",3
"lib1","SARS-CoV-2","CACCAAAACATATACC",8,109.44,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A33Q Y39L N118F C150F",4
"lib1","SARS-CoV-2","CACCAAAACGTAAAAG",14,107.6,10.02,-0.75,0.13,2.01,1.07,0,">1 nonsynonymous","W106S V173H",2
"lib1","SARS-CoV-2","CACCAAAAGACCCGCG",4,17.47,9.02,-1.75,0.17,1.76,1.11,0.03,">1 nonsynonymous","T100F L131S",2
"lib1","SARS-CoV-2","CACCAAAATATCAAGA",1,61.31,9.48,-1.29,0.1,2.81,1.11,0,">1 nonsynonymous","I2N I104Y Y119L",3
"lib1","SARS-CoV-2","CACCAAACACTGCGAA",9,63.43,8.62,-2.14,0.09,2.92,1.04,0,">1 nonsynonymous","C61E Q168V G174E",3
"lib1","SARS-CoV-2","CACCAAACAGCAGGTG",1,26.6,6,-4.76,2,1.5,1.18,0.04,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","CACCAAACATAAGTTT",1,23.56,9.89,-0.87,0.18,2.23,1.01,0.01,"1 nonsynonymous","Q84D",1
"lib1","SARS-CoV-2","CACCAAACATGTTTCG",5,71.66,10.71,-0.05,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCAAACCCCCACTC",7,117.35,8.46,-2.3,0.12,2.78,1.07,0.01,">1 nonsynonymous","K48N T170I",2
"lib1","SARS-CoV-2","CACCAAACCCGTTGCG",3,42.53,10.75,-0.01,0.07,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCAAAGACGAGATC",5,25.66,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N4F E10C R136Y",3
"lib1","SARS-CoV-2","CACCAAAGCCCACATA",2,10.56,6,-4.76,2,3,1.18,0.01,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","CACCAAAGGACTCACC",3,0.49,NA,NA,NA,NA,NA,NA,"stop","T3S F44R I80M N120S V182* T193R",6
"lib1","SARS-CoV-2","CACCAAAGGGAAAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S19M F62L Q84W G101* K114W N120F",6
"lib1","SARS-CoV-2","CACCAAAGGTTCGCAG",1,0.65,NA,NA,NA,NA,NA,NA,"stop","C61S L162*",2
"lib1","SARS-CoV-2","CACCAAAGTACCGGTA",3,147.96,10.72,-0.04,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCAAATTAACCCCT",9,84.27,10.4,-0.36,0.07,2.96,1,0,">1 nonsynonymous","A105S F160V K199N",3
"lib1","SARS-CoV-2","CACCAACAACTTTCAA",1,16.41,8.64,-2.12,0.11,2.98,1,0.01,">1 nonsynonymous","R16Q C61P N118S F156V V173N",5
"lib1","SARS-CoV-2","CACCAACAGGTTGATC",1,18.07,10.74,-0.02,0.09,2.93,1.06,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","CACCAACATGCCGTCA",3,43.08,10.71,-0.05,0.1,2.9,1.09,0,">1 nonsynonymous","R27L S200D",2
"lib1","SARS-CoV-2","CACCAACCCGTGCACC",6,92.22,10.3,-0.46,0.06,2.83,1.05,0,">1 nonsynonymous","S129C G152L",2
"lib1","SARS-CoV-2","CACCAACCTCTAAGAC",3,30.5,9.24,-1.53,0.25,1.5,1.06,0.03,">1 nonsynonymous","L5H L122P T148S",3
"lib1","SARS-CoV-2","CACCAACTAAAGATGT",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L I88N",2
"lib1","SARS-CoV-2","CACCAACTCAGCACTG",5,124.64,10.73,-0.03,0.05,2.9,1.06,0,">1 nonsynonymous","F44W P149A",2
"lib1","SARS-CoV-2","CACCAAGAAAATTATG",1,5.14,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y21K T63S E154D",3
"lib1","SARS-CoV-2","CACCAAGAACTCAGGA",2,45.71,6,-4.76,2,3,1.11,0,">1 nonsynonymous","C49V N92V R124H P149T",4
"lib1","SARS-CoV-2","CACCAAGACCAAAGAG",2,17.88,10.74,-0.02,0.09,2.78,1.13,0,"1 nonsynonymous","F44Y",1
"lib1","SARS-CoV-2","CACCAAGATTCTAACC",1,19.6,6,-4.76,2,3,1.33,0.02,">1 nonsynonymous","A22M S41Q Q84N K94T F99Y R136M K198N",7
"lib1","SARS-CoV-2","CACCAAGCCCACTAAG",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E D90P",2
"lib1","SARS-CoV-2","CACCAAGCCTCGAAAC",4,13.12,10.72,-0.05,0.07,2.79,1.15,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","CACCAAGGGAAAAATT",16,170.56,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y93D K128L",2
"lib1","SARS-CoV-2","CACCAAGGGATGTGAT",2,20.78,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L38H V103R E135N F160L",4
"lib1","SARS-CoV-2","CACCAAGGTTGAGGGG",3,7.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E135A L183R",2
"lib1","SARS-CoV-2","CACCAAGTGTAATCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* P149E",2
"lib1","SARS-CoV-2","CACCAATACCGATGAA",4,30.49,10.38,-0.39,0.03,2.84,1.07,0,">1 nonsynonymous","I2L N30Q Y121F",3
"lib1","SARS-CoV-2","CACCAATACGTCTCTT",7,63.33,10.31,-0.45,0.05,2.96,1,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","CACCAATAGTTTTTAC",9,133.48,8.37,-2.4,0.14,2.24,1.12,0.01,">1 nonsynonymous","Y66T Y91F E141S N157L",4
"lib1","SARS-CoV-2","CACCAATATCTTCATG",6,47.26,8.39,-2.38,0.14,1.56,1.15,0.01,">1 nonsynonymous","D90G F160V G174F",3
"lib1","SARS-CoV-2","CACCAATATTTTCAAG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","K56L P149*",2
"lib1","SARS-CoV-2","CACCAATCATCAACAA",1,45.65,10.71,-0.05,0.06,2.93,1.02,0,">1 nonsynonymous","Y35I P149T A190V",3
"lib1","SARS-CoV-2","CACCAATGCCCACCCC",1,1.98,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CACCAATTATACTTGT",1,7.11,8.45,-2.31,0.22,1.73,1.23,0.03,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","CACCAATTATGAGACA",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N G9M C31A K87I S129E",5
"lib1","SARS-CoV-2","CACCAATTGACACAAT",3,19.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6P K48F A89M",3
"lib1","SARS-CoV-2","CACCACAAATCCTTTA",23,222.75,8.66,-2.1,0.16,1.5,1.05,0.01,">1 nonsynonymous","A14L S41P D90R K114N",4
"lib1","SARS-CoV-2","CACCACAACAATTAAC",3,29.26,9.97,-0.8,0.07,2.84,1.04,0,">1 nonsynonymous","N30S K87C E154G",3
"lib1","SARS-CoV-2","CACCACACAAAACTTG",1,7.41,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N1M Y21D L57P A89N E141L",5
"lib1","SARS-CoV-2","CACCACACGAGTTGAA",6,47.09,6.19,-4.57,0.72,1.5,1.13,0.02,">1 nonsynonymous","F8P T55L N107G Y119V",4
"lib1","SARS-CoV-2","CACCACACGTCTGAAC",6,54,10.76,-0.01,0.06,2.99,1.01,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","CACCACAGTGAATAAT",1,22.04,10.74,-0.02,0.11,2.89,1.08,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","CACCACATATTAAACA",9,92.23,6.03,-4.73,1.37,1.5,1.23,0.04,">1 nonsynonymous","F99D S113C N171F",3
"lib1","SARS-CoV-2","CACCACATGCCATCTT",1,27.3,10.75,-0.01,0.05,2.96,1.03,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","CACCACATGTGTTACA",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S Y66L V180R",3
"lib1","SARS-CoV-2","CACCACCATACTAATA",1,12.32,9.5,-1.27,0.21,1.92,1.19,0.02,">1 nonsynonymous","D34P N107P",2
"lib1","SARS-CoV-2","CACCACCATGTTGTAA",1,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","CACCACCATTTACGCA",5,52.43,7.41,-3.35,0.26,1.59,1.19,0.02,">1 nonsynonymous","A33T A67I G117A Q144P",4
"lib1","SARS-CoV-2","CACCACCCAGTCAGGA",5,68.7,10.77,0.01,0.07,2.88,1.04,0,"1 nonsynonymous","S129C",1
"lib1","SARS-CoV-2","CACCACCGTTTTACAG",6,45.98,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N107Q C150K",2
"lib1","SARS-CoV-2","CACCACGAATAATATA",7,13.73,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14T D90K D97N A145S V180D",5
"lib1","SARS-CoV-2","CACCACGCACGTACAG",4,6.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44P K56M K114T G146I Q176R",5
"lib1","SARS-CoV-2","CACCACGCCACGTCAC",15,192.55,10.68,-0.08,0.04,2.91,1.03,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","CACCACGCCCATTAAG",11,229.14,10.04,-0.72,0.06,2.28,1.04,0,">1 nonsynonymous","N40I K48R R73K T85M H189D",5
"lib1","SARS-CoV-2","CACCACGGAGCAGAAT",3,8.62,9.98,-0.79,0.36,1.72,1.05,0.05,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","CACCACGTGATACAAA",1,20.07,8.68,-2.09,0.14,2.68,1.05,0.01,">1 nonsynonymous","K94C Y119D G146S",3
"lib1","SARS-CoV-2","CACCACGTGGCACGTT",1,11.71,7.15,-3.61,0.58,1.5,1.1,0.05,">1 nonsynonymous","P96I V103M R124I C150R E154H",5
"lib1","SARS-CoV-2","CACCACTAAACAGACC",4,42.61,8.55,-2.21,0.21,1.5,1.12,0.02,"1 nonsynonymous","A89K",1
"lib1","SARS-CoV-2","CACCACTATTTACCGG",3,66.75,8.94,-1.82,0.1,2.77,1.1,0,">1 nonsynonymous","I2Q T85N T170V",3
"lib1","SARS-CoV-2","CACCACTCGAGGTATC",1,69.39,10.61,-0.16,0.05,2.88,1.02,0,">1 nonsynonymous","A14I A22R C61S Q168H",4
"lib1","SARS-CoV-2","CACCACTGCTCATATA",1,14.36,7.86,-2.91,0.46,1.75,1.38,0.05,">1 nonsynonymous","T3W S41V T63I S129K G146A G152K",6
"lib1","SARS-CoV-2","CACCACTTGATATCTG",6,9.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106P V173R",2
"lib1","SARS-CoV-2","CACCAGAAAAATCAGA",5,26.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49L G146K",2
"lib1","SARS-CoV-2","CACCAGAACACTACGA",4,38.5,6,-4.76,1.18,1.5,1.24,0.01,">1 nonsynonymous","K94L I138R P149Q",3
"lib1","SARS-CoV-2","CACCAGAATAGCTTAA",1,0.46,NA,NA,NA,NA,NA,NA,"stop","N40E T55N D90P Y121* I142* N157A",6
"lib1","SARS-CoV-2","CACCAGAATATATCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T55K G86* W106A V182H",4
"lib1","SARS-CoV-2","CACCAGACCAGGACCT",10,199.11,6.21,-4.55,0.68,1.5,1.21,0.02,">1 nonsynonymous","K26G V77L Y123K I142M Q168I Y178K",6
"lib1","SARS-CoV-2","CACCAGAGTAGTCGCT",5,134.2,9.72,-1.04,0.06,2.76,1.02,0,">1 nonsynonymous","F44A K56E T170K",3
"lib1","SARS-CoV-2","CACCAGCAAGATAATT",7,0.41,NA,NA,NA,NA,NA,NA,"stop","P96V I138*",2
"lib1","SARS-CoV-2","CACCAGCCTTCCACGA",1,36.48,10.18,-0.58,0.09,2.55,1.01,0,">1 nonsynonymous","N1A Q144L",2
"lib1","SARS-CoV-2","CACCAGCGAATATGAT",3,5.11,6,-4.76,2,3,1.08,0,">1 nonsynonymous","A33R A42V N92L K128F F134A",5
"lib1","SARS-CoV-2","CACCAGGAAGACGATT",5,44.8,9.54,-1.23,0.14,1.93,1.12,0.01,">1 nonsynonymous","G51M C61D D98S",3
"lib1","SARS-CoV-2","CACCAGGACTAGAAAT",6,4.49,NA,NA,NA,NA,NA,NA,"stop","I28F N109* Y123S L131R V173Q",5
"lib1","SARS-CoV-2","CACCAGGAGGTCACAC",1,30.16,10.8,0.04,0.09,2.82,1.1,0,"1 nonsynonymous","K132Q",1
"lib1","SARS-CoV-2","CACCAGGCATTAAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","N30* D59K E141K F156*",4
"lib1","SARS-CoV-2","CACCAGGCTGCTGTCA",1,13.93,9.88,-0.89,0.16,2.12,1.07,0.02,">1 nonsynonymous","T63V Y121W",2
"lib1","SARS-CoV-2","CACCAGGGAAAGATTC",6,70.84,10.73,-0.03,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCAGGGACAAAAGG",1,74.42,10.72,-0.04,0.04,2.94,1,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","CACCAGGGGATTGTGT",1,10.95,9.12,-1.64,0.21,2.95,1.06,0.01,">1 nonsynonymous","N4R G9N N171P T201R",4
"lib1","SARS-CoV-2","CACCAGGTGTTTGGCA",4,94.02,9.85,-0.91,0.04,2.72,1.06,0,">1 nonsynonymous","N118V P149E",2
"lib1","SARS-CoV-2","CACCAGTATCCAGACT",3,27.08,10.66,-0.11,0.13,2.77,1.2,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CACCAGTATGCACTAA",3,26.7,10.26,-0.51,0.1,2.8,1.09,0.01,">1 nonsynonymous","D97L I138Q P169Y",3
"lib1","SARS-CoV-2","CACCAGTCCTCAAAAA",5,0.69,NA,NA,NA,NA,NA,NA,"stop","T15S Y35K E76S G146*",4
"lib1","SARS-CoV-2","CACCAGTGACCTAATG",4,65.75,10.35,-0.41,0.07,2.81,1.04,0,">1 nonsynonymous","E141I P149H",2
"lib1","SARS-CoV-2","CACCAGTGCTCTAACA",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K D34I C150A",3
"lib1","SARS-CoV-2","CACCAGTGGCAGAATT",1,17.1,7.67,-3.09,0.41,1.5,1.16,0.06,">1 nonsynonymous","Y35F G74T N107R",3
"lib1","SARS-CoV-2","CACCATAAACAATATG",2,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10P N58H I80M Q84E",4
"lib1","SARS-CoV-2","CACCATAACTTAGAAG",2,34.77,10.71,-0.06,0.1,2.93,1.04,0,"1 nonsynonymous","R16K",1
"lib1","SARS-CoV-2","CACCATACAAACGTGA",4,36.93,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F12D G86K",2
"lib1","SARS-CoV-2","CACCATACACACGAAA",1,25.27,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","N30I L60R T85S A89G Y143S",5
"lib1","SARS-CoV-2","CACCATACCACAAAAT",2,35.66,10.25,-0.52,0.06,2.77,1.03,0,">1 nonsynonymous","S45M A190V",2
"lib1","SARS-CoV-2","CACCATAGGGTAAACA",5,0.83,NA,NA,NA,NA,NA,NA,"stop","G117R R127* D137I S147F Y178A",5
"lib1","SARS-CoV-2","CACCATATAACACACG",2,17.31,6.36,-4.4,0.59,1.5,1.15,0.04,">1 nonsynonymous","P82T E154G L162M Y175H",4
"lib1","SARS-CoV-2","CACCATATTGATGAAA",2,6.84,9.09,-1.67,0.33,1.5,1,0.03,">1 nonsynonymous","D34P S69L",2
"lib1","SARS-CoV-2","CACCATCAAAAAATTA",1,13.59,9.72,-1.05,0.15,1.76,1.11,0.01,">1 nonsynonymous","T15S V37Q K94V T140L",4
"lib1","SARS-CoV-2","CACCATCAACTTAGAT",2,16.75,6.49,-4.27,0.41,1.5,1.04,0.02,">1 nonsynonymous","P7L V103K G116N",3
"lib1","SARS-CoV-2","CACCATCAAGCATAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","D68L A192T K198*",3
"lib1","SARS-CoV-2","CACCATCTAATTGCCA",1,28.8,10.66,-0.1,0.07,2.87,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CACCATGATAACAACC",1,13.67,10.06,-0.7,0.14,2.46,1.05,0.01,">1 nonsynonymous","F134R N171C",2
"lib1","SARS-CoV-2","CACCATGCGTGTTTTA",7,84.78,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2W C31T L38Q F44T",4
"lib1","SARS-CoV-2","CACCATGGCTTCTCCG",1,34.9,8.43,-2.33,0.27,1.5,1.07,0.02,">1 nonsynonymous","G9E Y121F K132L Y165R",4
"lib1","SARS-CoV-2","CACCATGTAACCTACA",1,84.46,9.55,-1.21,0.13,1.91,1.14,0.01,">1 nonsynonymous","N40W P96S Y121F",3
"lib1","SARS-CoV-2","CACCATGTACCATGAA",4,45.63,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R27A S45V D59L G83K S129N D137L Y178W",7
"lib1","SARS-CoV-2","CACCATTACTATGATT",4,32.26,8.51,-2.25,0.27,1.5,1.28,0.03,">1 nonsynonymous","N4I P133Q A145V",3
"lib1","SARS-CoV-2","CACCATTAGATAGCTA",8,15.85,6,-4.76,2,3,1.18,0.03,">1 nonsynonymous","F12T A105P D112M",3
"lib1","SARS-CoV-2","CACCATTAGTGTAAAA",1,5.34,8.67,-2.1,0.26,1.5,1,0.02,">1 nonsynonymous","D59E I104N",2
"lib1","SARS-CoV-2","CACCATTCCATGACCA",2,29.67,8.87,-1.89,0.09,2.87,1.02,0.01,">1 nonsynonymous","G116V G166L",2
"lib1","SARS-CoV-2","CACCATTCCGACCAGA",14,2.64,NA,NA,NA,NA,NA,NA,"stop","S69R G86M L122* F134M",4
"lib1","SARS-CoV-2","CACCATTCCGAGCCTT",2,19.56,9.28,-1.48,0.07,2.98,1.08,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","CACCATTGAAAGCTGA",3,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R Y91G T100I V153D V180I L183P",6
"lib1","SARS-CoV-2","CACCATTGAACAAACA",2,0.88,NA,NA,NA,NA,NA,NA,"stop","S45D A105* R124P L131W L183R",5
"lib1","SARS-CoV-2","CACCATTGAGAACACT",8,51.06,10.82,0.05,0.05,2.96,1.01,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","CACCATTGTCCTCTCT",1,14.03,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C49R P149L",2
"lib1","SARS-CoV-2","CACCCAAAGTGTAACG",1,6.88,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F47S D68G A89T",3
"lib1","SARS-CoV-2","CACCCAAATCCTTCCG",1,32.42,6.23,-4.53,0.67,1.5,1.15,0.02,">1 nonsynonymous","C150S F156W K198P",3
"lib1","SARS-CoV-2","CACCCAACACCTTCAA",4,18.63,10.69,-0.07,0.05,2.93,1.06,0,"1 nonsynonymous","S29Y",1
"lib1","SARS-CoV-2","CACCCAACCATGTCGC",4,29.26,6,-4.76,1.5,1.5,1.28,0.05,">1 nonsynonymous","D90G N157Y",2
"lib1","SARS-CoV-2","CACCCAACCCCGCACA",8,192.34,8.56,-2.2,0.09,2.62,1.09,0,">1 nonsynonymous","C6D R73A G146S",3
"lib1","SARS-CoV-2","CACCCAACTAGTATCC",5,97.15,10.71,-0.05,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CACCCAACTTCACCCT",1,94.53,9.16,-1.6,0.07,2.82,1.12,0,">1 nonsynonymous","C61P G174V",2
"lib1","SARS-CoV-2","CACCCAAGGTCTTCTC",10,21.15,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","K87L V182G",2
"lib1","SARS-CoV-2","CACCCAATGCAGTATA",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S Y50I A190S",3
"lib1","SARS-CoV-2","CACCCACATGTCTTGT",10,253.66,8.97,-1.8,0.06,2.76,1.09,0,">1 nonsynonymous","A42N Y119E",2
"lib1","SARS-CoV-2","CACCCACCAAGATGCA",2,2.34,NA,NA,NA,NA,NA,NA,"stop","G83Y S113T R136N A145V T170*",5
"lib1","SARS-CoV-2","CACCCACCCTATTGCT",2,47.56,10.23,-0.54,0.05,2.9,1.07,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","CACCCACTAAGCGTCT",10,151.21,10.19,-0.57,0.03,2.88,1.01,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","CACCCACTCAAAGAAA",4,51.75,10.78,0.01,0.07,2.93,1.07,0,"1 nonsynonymous","V32H",1
"lib1","SARS-CoV-2","CACCCACTCACATGAA",3,0.64,NA,NA,NA,NA,NA,NA,"stop","T63C L95*",2
"lib1","SARS-CoV-2","CACCCACTTGTGATCG",1,11.24,10.02,-0.74,0.14,2.87,1.04,0.01,">1 nonsynonymous","G116L S164G",2
"lib1","SARS-CoV-2","CACCCAGAAATAACAG",2,26.3,10.81,0.04,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCAGACGGAACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T E10G V77S N110G",4
"lib1","SARS-CoV-2","CACCCAGCGGTTCACA",7,2.36,NA,NA,NA,NA,NA,NA,"stop","D90K K199*",2
"lib1","SARS-CoV-2","CACCCATAACAAGAGA",2,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S T55L L95T V103R N110D E141S",6
"lib1","SARS-CoV-2","CACCCATACCCCTACT",15,235.07,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5Y V11D F44M P96C T100V F167L",6
"lib1","SARS-CoV-2","CACCCATATGGTAAAG",1,60.43,10.59,-0.18,0.08,2.92,1,0,">1 nonsynonymous","C61H T85G V115I T140A",4
"lib1","SARS-CoV-2","CACCCATCGATTTTCA",2,129.4,10.63,-0.13,0.09,2.79,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCATGTACGCGGC",5,31.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58K E76K Y93D S164L",4
"lib1","SARS-CoV-2","CACCCATGTACTCTAT",4,0.19,NA,NA,NA,NA,NA,NA,"stop","L5* N92Q Y121H",3
"lib1","SARS-CoV-2","CACCCATTCACTGCAA",2,46.75,8.78,-1.99,0.15,1.5,1.11,0.01,">1 nonsynonymous","F62K A89S L125F K132F",4
"lib1","SARS-CoV-2","CACCCATTGACCTACA",10,73.87,8.92,-1.85,0.22,1.5,1.12,0.02,">1 nonsynonymous","P7S F17Y P96T",3
"lib1","SARS-CoV-2","CACCCCAAGTGCGATT",4,41.58,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N58F N157V",2
"lib1","SARS-CoV-2","CACCCCACACACCTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M S129V L162P S200F",4
"lib1","SARS-CoV-2","CACCCCACATATCACA",1,33.87,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A42P G51V P177L",3
"lib1","SARS-CoV-2","CACCCCAGAAATAGAA",3,19.21,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","T3L F44D I88H G146L",4
"lib1","SARS-CoV-2","CACCCCAGCGGTTACG",2,26.73,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","E10G D98T A105R K114E T148F",5
"lib1","SARS-CoV-2","CACCCCATAAAAGTAG",7,68.27,10.36,-0.4,0.03,2.83,1,0,">1 nonsynonymous","D90E L131M",2
"lib1","SARS-CoV-2","CACCCCATTATACCGA",1,36.11,10.75,-0.01,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCCATTATAGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31R N64W I104*",3
"lib1","SARS-CoV-2","CACCCCCATAAACTAG",4,2.79,NA,NA,NA,NA,NA,NA,"stop","E10Y I72* F160L",3
"lib1","SARS-CoV-2","CACCCCCATACATAGA",4,0.67,NA,NA,NA,NA,NA,NA,"stop","F12S D34S C61A K87L K94* C102T N118*",7
"lib1","SARS-CoV-2","CACCCCCATGATTATT",1,25.04,9.9,-0.87,0.18,2.3,1.09,0.01,"1 nonsynonymous","K48G",1
"lib1","SARS-CoV-2","CACCCCCGAATTATAT",4,131.01,10.38,-0.38,0.04,2.86,1.07,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","CACCCCCGCCGGCACG",6,159.18,10.16,-0.6,0.06,2.79,1.02,0,">1 nonsynonymous","D97L P161S",2
"lib1","SARS-CoV-2","CACCCCCTCGCCGGAC",2,17.92,6,-4.76,2,1.5,1.1,0.07,">1 nonsynonymous","Y119V C150A",2
"lib1","SARS-CoV-2","CACCCCCTCTTGCCAT",15,6.71,NA,NA,NA,NA,NA,NA,"stop","E10W F47* L60F V71T F99H L122S",6
"lib1","SARS-CoV-2","CACCCCCTGTGCTACC",1,23.46,10.13,-0.64,0.06,2.95,1.06,0,">1 nonsynonymous","S129A G152V",2
"lib1","SARS-CoV-2","CACCCCCTTACGGATG",2,60.99,10.71,-0.05,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCCCTTGTAAGCA",2,18.34,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","P82V V103M",2
"lib1","SARS-CoV-2","CACCCCGAAGTCCACG",3,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D W106Y N157Y S184P",4
"lib1","SARS-CoV-2","CACCCCGATTATACCT",3,13.78,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W23S A89W",2
"lib1","SARS-CoV-2","CACCCCGCAATGTAAA",2,6.29,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","F44Y T63H Y93I I104G T148L",5
"lib1","SARS-CoV-2","CACCCCGCTAAGCAAG",3,36.31,10.56,-0.21,0.05,2.83,1.07,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","CACCCCGTTACATCTT",4,103.27,10.49,-0.28,0.05,2.91,1.03,0,">1 nonsynonymous","F62M T100S",2
"lib1","SARS-CoV-2","CACCCCTACTAAATAA",3,32.03,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6V D34R V52P Y119S",4
"lib1","SARS-CoV-2","CACCCCTCTTAGCATA",4,99.7,10.24,-0.52,0.05,2.8,1.03,0,">1 nonsynonymous","V77T K198S",2
"lib1","SARS-CoV-2","CACCCCTTGAATGTTT",16,72.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L C61P L95I N107Y P169N",5
"lib1","SARS-CoV-2","CACCCCTTGGAATAGT",12,248.63,10.73,-0.03,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCGAACGTAATTA",2,42.13,6,-4.76,1.25,1.5,1.12,0.01,">1 nonsynonymous","V32L C49Y Y93E",3
"lib1","SARS-CoV-2","CACCCGAAGAGTACGA",4,8308.62,10.77,0,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCGACCCAGAATT",2,70.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48S T55I S113Y N120A Y165L",5
"lib1","SARS-CoV-2","CACCCGACTGAAACAG",5,63.86,9.58,-1.19,0.07,2.84,1.06,0,">1 nonsynonymous","N1S Y119V",2
"lib1","SARS-CoV-2","CACCCGATAGGCTACG",5,1.84,NA,NA,NA,NA,NA,NA,"stop","G51S C61G I104*",3
"lib1","SARS-CoV-2","CACCCGATCAAAAATC",3,66.07,10.36,-0.41,0.05,2.91,1,0,">1 nonsynonymous","A22V S45D",2
"lib1","SARS-CoV-2","CACCCGCCGTGGATCA",7,43.92,7.88,-2.88,0.27,1.5,1,0.03,">1 nonsynonymous","S29E A42F G86K",3
"lib1","SARS-CoV-2","CACCCGCGCCCGATTT",3,7.07,10.7,-0.07,0.09,2.81,1.14,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","CACCCGCTACTGCATT",2,6.85,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C49M K87L P96Y G146M",4
"lib1","SARS-CoV-2","CACCCGGCTCAACCAA",5,31.89,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","L5A A89R F167L",3
"lib1","SARS-CoV-2","CACCCGGGGTCCGTCA",12,89.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S G51P D97C",3
"lib1","SARS-CoV-2","CACCCGGTACGCTGCT",7,97.29,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25M Y66E G74S P82N F156V",5
"lib1","SARS-CoV-2","CACCCGTAAATAACCC",5,86.07,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y50T N157T",2
"lib1","SARS-CoV-2","CACCCGTGGACATCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9Q T55F F99E W106*",4
"lib1","SARS-CoV-2","CACCCTAAATTGACAC",2,47.73,10.23,-0.53,0.08,2.85,1,0,">1 nonsynonymous","L60Y Y91M Q163R",3
"lib1","SARS-CoV-2","CACCCTAACCGTAATA",1,11.15,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","A22T V37K N92H",3
"lib1","SARS-CoV-2","CACCCTAAGTAAATAA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","T15R S19M L60R N120*",4
"lib1","SARS-CoV-2","CACCCTAATATGCTTA",1,13.79,9.66,-1.1,0.12,1.81,1.06,0.01,">1 nonsynonymous","F44S P96G F134S",3
"lib1","SARS-CoV-2","CACCCTAATGCCTCTC",2,48.46,6,-4.76,2,3,1.25,0,">1 nonsynonymous","V37P K48G D98M",3
"lib1","SARS-CoV-2","CACCCTACCCAAAATA",3,88.86,10.38,-0.39,0.05,2.92,1.02,0,">1 nonsynonymous","V37S P169H",2
"lib1","SARS-CoV-2","CACCCTAGAGAGGTAC",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82D P96G",2
"lib1","SARS-CoV-2","CACCCTATAGTTAATG",1,9.31,6.2,-4.57,2,1.5,1.21,0.05,">1 nonsynonymous","F17S Y50F D59S G83W T100H",5
"lib1","SARS-CoV-2","CACCCTATCAGCGTAG",7,4.25,NA,NA,NA,NA,NA,NA,"stop","S19* G166Y",2
"lib1","SARS-CoV-2","CACCCTATCTCAAAAG",1,1.36,NA,NA,NA,NA,NA,NA,"stop","I28T Y39* C61G I88K",4
"lib1","SARS-CoV-2","CACCCTATGCTAGAAT",1,10.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10I F126P",2
"lib1","SARS-CoV-2","CACCCTCACCTCACAT",4,40.39,10.25,-0.52,0.03,2.86,1.03,0,">1 nonsynonymous","N1M E135M",2
"lib1","SARS-CoV-2","CACCCTCAGAGACGAC",11,109.01,10.24,-0.52,0.07,2.8,1,0,">1 nonsynonymous","C61P E135M",2
"lib1","SARS-CoV-2","CACCCTCAGTAGTTTC",3,84.86,7.31,-3.46,0.22,1.5,1.17,0.01,">1 nonsynonymous","N92D Y175H",2
"lib1","SARS-CoV-2","CACCCTCCTAATATTG",2,41.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37D E76G V103D Q176L",4
"lib1","SARS-CoV-2","CACCCTCCTCTCCCGA",2,27.24,9.4,-1.36,0.17,1.58,1.13,0.01,">1 nonsynonymous","N40L P96H",2
"lib1","SARS-CoV-2","CACCCTCTACTGTGTG",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S L125M F134T E186Y",4
"lib1","SARS-CoV-2","CACCCTCTGATTAAAT",12,3.5,NA,NA,NA,NA,NA,NA,"stop","F17* Y119S",2
"lib1","SARS-CoV-2","CACCCTGTACAAATAT",4,60.58,10.66,-0.11,0.1,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCTTAGTGTGCTA",2,68.18,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y39C S45R Y123L E135K F160L T201E",6
"lib1","SARS-CoV-2","CACCCTTATTCAGAAG",3,32.7,10.79,0.03,0.07,2.8,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCCTTCGGCGCCCA",1,1.33,NA,NA,NA,NA,NA,NA,"stop","C6V A81S N120* P133A T170P",5
"lib1","SARS-CoV-2","CACCCTTGGAGACTCC",6,31.46,7.36,-3.4,0.42,1.5,1,0.05,">1 nonsynonymous","W23R F62H D98P R124C",4
"lib1","SARS-CoV-2","CACCCTTTATATATAG",6,13.83,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6S T15S A105Q",3
"lib1","SARS-CoV-2","CACCCTTTCAGGATCA",1,19.07,8.87,-1.9,0.19,1.73,1.1,0.02,">1 nonsynonymous","L38V E141K G155I",3
"lib1","SARS-CoV-2","CACCGAAAAAACTATG",3,16.06,7.45,-3.32,0.22,1.73,1.15,0.02,">1 nonsynonymous","I2N A14S G86T",3
"lib1","SARS-CoV-2","CACCGAAAAATGTTCT",8,61.76,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","V71M N107F G117Q Y121Q Q163L",5
"lib1","SARS-CoV-2","CACCGAAAGATCAAAG",2,13.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T46V N92K S184N",3
"lib1","SARS-CoV-2","CACCGAAAGCCCCTGC",1,48.37,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L5R N30S I88W D97A",4
"lib1","SARS-CoV-2","CACCGAACGATAATCC",4,74.84,6.42,-4.35,0.72,1.5,1.18,0.05,"1 nonsynonymous","F167Q",1
"lib1","SARS-CoV-2","CACCGAAGGAAAAAGT",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M C61I P96K K128T G152S N157V L183V",7
"lib1","SARS-CoV-2","CACCGAAGTAAGGACC",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R D98T",2
"lib1","SARS-CoV-2","CACCGAATGAACCGGA",9,0.03,NA,NA,NA,NA,NA,NA,"stop","P82L L125M V181*",3
"lib1","SARS-CoV-2","CACCGACAAATGATCC",3,20.94,8.46,-2.3,0.34,1.5,1,0.07,">1 nonsynonymous","A81H Y93F",2
"lib1","SARS-CoV-2","CACCGACACTTTACGA",6,104.62,10.04,-0.72,0.05,2.9,1,0,">1 nonsynonymous","T55I K132T Q168N",3
"lib1","SARS-CoV-2","CACCGACCAACAAAAA",2,28.27,10.15,-0.62,0.11,2.6,1.01,0.01,">1 nonsynonymous","S41P K56R A81R",3
"lib1","SARS-CoV-2","CACCGACTCCGGTGAG",4,24.06,9.08,-1.69,0.13,2.79,1.24,0.01,">1 nonsynonymous","S36G G166K",2
"lib1","SARS-CoV-2","CACCGACTTTTAATGA",3,31.89,8.21,-2.55,0.42,1.5,1,0.06,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","CACCGAGGAAGGTGAC",2,98.46,6.4,-4.36,0.56,1.5,1.21,0.02,">1 nonsynonymous","I28Q L60G T100S",3
"lib1","SARS-CoV-2","CACCGAGGATTTAAAG",2,12.23,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6Q T15C N64I V103P Y119N",5
"lib1","SARS-CoV-2","CACCGATAATGTAGAC",2,52.74,8.78,-1.98,0.11,2.61,1.1,0.01,">1 nonsynonymous","W106R L125V",2
"lib1","SARS-CoV-2","CACCGATGAAGTTATA",2,8.98,9.97,-0.8,0.3,2.25,1.03,0.04,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","CACCGATGCAATGCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K87M N107* S129T Q168L",4
"lib1","SARS-CoV-2","CACCGATTGCTCTGTC",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L C150S",2
"lib1","SARS-CoV-2","CACCGCAAAAGGATAA",8,95.83,10.74,-0.02,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCGCAGGGCGATAC",1,35.42,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K94F F99C K128V F134S V153S",5
"lib1","SARS-CoV-2","CACCGCCAACTTGTTT",10,75.18,10.7,-0.07,0.04,2.91,1.05,0,"1 nonsynonymous","Y66N",1
"lib1","SARS-CoV-2","CACCGCCATAATCATG",1,23.82,6,-4.76,1.57,1.5,1.33,0.05,">1 nonsynonymous","N109E E141G Y165L V173L",4
"lib1","SARS-CoV-2","CACCGCGAACCTATCT",10,19.84,9.02,-1.74,0.31,1.5,1.12,0.05,">1 nonsynonymous","C6S N13F S41Y G51S",4
"lib1","SARS-CoV-2","CACCGCGGCAGGATAA",1,21.21,6.32,-4.44,0.75,1.5,1.24,0.04,">1 nonsynonymous","F99T T140H",2
"lib1","SARS-CoV-2","CACCGCGGGTCATGCG",3,51.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5Y S19L V65I D68L",4
"lib1","SARS-CoV-2","CACCGCGGTCTATTGA",13,86.02,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F70L P96D G146I",3
"lib1","SARS-CoV-2","CACCGCGTACAATCAT",5,29.24,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39C L60H F99I L122T E186V",5
"lib1","SARS-CoV-2","CACCGCTCAATTACAC",6,34.35,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","D90I L95Y N118R",3
"lib1","SARS-CoV-2","CACCGCTTCTAGCGCC",5,0.54,NA,NA,NA,NA,NA,NA,"stop","L38W N171*",2
"lib1","SARS-CoV-2","CACCGCTTGACAAATT",2,23.33,10.09,-0.67,0.12,2.48,1.06,0.01,">1 nonsynonymous","N13S V37M K128L",3
"lib1","SARS-CoV-2","CACCGGAATCCCGAGG",2,11.68,NA,NA,NA,NA,NA,NA,"stop","P54* T100C N107R L122G L188W",5
"lib1","SARS-CoV-2","CACCGGACGTAGATAA",2,35.14,10.55,-0.21,0.06,2.85,1.12,0,"1 nonsynonymous","N4P",1
"lib1","SARS-CoV-2","CACCGGATCATATACC",12,85.6,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25L Y93I D112N",3
"lib1","SARS-CoV-2","CACCGGCAAGCCGGGT",1,28.34,7.67,-3.09,0.31,1.72,1.23,0.04,">1 nonsynonymous","F12A Y121N",2
"lib1","SARS-CoV-2","CACCGGCATATCAAGC",3,12,7.62,-3.14,0.48,1.65,1.18,0.04,"1 nonsynonymous","C158M",1
"lib1","SARS-CoV-2","CACCGGCTTATAGCTA",2,13.3,6,-4.76,2,3,1.29,0.03,">1 nonsynonymous","P82T G86R F99S I142H F156K",5
"lib1","SARS-CoV-2","CACCGGGAGTATGCAT",1,16.98,6.42,-4.34,0.75,1.5,1.18,0.04,">1 nonsynonymous","N58P T85W L95M F134V",4
"lib1","SARS-CoV-2","CACCGGGATGTGATGG",2,11.38,8.65,-2.11,0.15,2.81,1.1,0.01,">1 nonsynonymous","G166M V173P",2
"lib1","SARS-CoV-2","CACCGGTAAAACATCA",5,96.88,9.74,-1.03,0.07,2.23,1.05,0,">1 nonsynonymous","N1V T15F T55S G155S",4
"lib1","SARS-CoV-2","CACCGGTACTTTCCAT",1,23.2,9.61,-1.16,0.43,1.64,1.07,0.04,">1 nonsynonymous","I2F P82G",2
"lib1","SARS-CoV-2","CACCGGTATTAAACAT",2,6.65,6,-4.76,2,3,1.19,0.01,"1 nonsynonymous","I80H",1
"lib1","SARS-CoV-2","CACCGGTATTGAAGAT",3,45.93,9.94,-0.83,0.1,2.68,1.04,0,">1 nonsynonymous","K87F K114H G152L",3
"lib1","SARS-CoV-2","CACCGGTGTTACAAAC",1,0.1,NA,NA,NA,NA,NA,NA,"stop","G9* N40D P82Q T85A L95H C102I",6
"lib1","SARS-CoV-2","CACCGTACCGTAGGTG",5,36.43,9.9,-0.86,0.09,2.17,1.05,0,">1 nonsynonymous","F12L C61L T100S P149E",4
"lib1","SARS-CoV-2","CACCGTAGTATCAGGC",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W I138M",2
"lib1","SARS-CoV-2","CACCGTATTAATTGAA",2,17.74,10.85,0.08,0.09,2.93,1.07,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","CACCGTCAAAGTTATC",2,36.74,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","D68V C158T",2
"lib1","SARS-CoV-2","CACCGTGAGAATATTT",2,33.7,10.68,-0.08,0.06,2.88,1.06,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","CACCGTGCGTGCCAGT",3,8.99,10.82,0.05,0.15,2.91,1.08,0.01,">1 nonsynonymous","D98H L122R",2
"lib1","SARS-CoV-2","CACCGTGCTTTCTGTC",1,33.7,6.09,-4.67,0.82,2.11,1.27,0.03,">1 nonsynonymous","A81D K94M",2
"lib1","SARS-CoV-2","CACCGTTAAAGGTTCA",6,2.09,NA,NA,NA,NA,NA,NA,"stop","L131* Y165D G166A K199T",4
"lib1","SARS-CoV-2","CACCGTTAAATCATTA",5,25.59,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Q84M A105R G116L E141G",4
"lib1","SARS-CoV-2","CACCGTTAGACTCTTT",7,98.13,6,-4.76,1.33,1.5,1.26,0.01,">1 nonsynonymous","K94S R136V",2
"lib1","SARS-CoV-2","CACCGTTAGCCTCACG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","F8W S36A Q168* K198I",4
"lib1","SARS-CoV-2","CACCGTTATAAACTCA",3,18.25,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V20M Y121N Y165H",3
"lib1","SARS-CoV-2","CACCGTTCATATAAAT",2,8.02,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","E10G V65W G86R C102G Y119S N130T",6
"lib1","SARS-CoV-2","CACCGTTTATTAAATT",4,53.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G166E R179Q T201R",3
"lib1","SARS-CoV-2","CACCGTTTTCAAATAC",7,107.04,10.24,-0.53,0.07,2.73,1.01,0,">1 nonsynonymous","N30P D90R N151M",3
"lib1","SARS-CoV-2","CACCTAAAAAATCCGG",4,39.74,9.49,-1.28,0.24,1.5,1.04,0.03,">1 nonsynonymous","Y35S T63F Q84L P191T",4
"lib1","SARS-CoV-2","CACCTAAAAAGGGATC",15,168.01,6,-4.76,1.16,1.5,1.17,0.01,">1 nonsynonymous","F17I F62S G86C L122A",4
"lib1","SARS-CoV-2","CACCTAAACCTAAGGA",3,1.23,NA,NA,NA,NA,NA,NA,"stop","A14* D98R V181P",3
"lib1","SARS-CoV-2","CACCTAACTTGGTATC",8,63.68,9.13,-1.63,0.22,1.5,1.09,0.02,">1 nonsynonymous","L5S N64A A89S R127M",4
"lib1","SARS-CoV-2","CACCTAAGTCGCTGGT",4,106.24,10.77,0.01,0.07,2.86,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CACCTAATAAAAAGGT",11,16.93,6.86,-3.9,0.88,1.5,1.25,0.06,">1 nonsynonymous","A42I K94V N118Y",3
"lib1","SARS-CoV-2","CACCTAATACCTGCTT",3,49.73,9.06,-1.7,0.13,1.71,1.11,0.01,">1 nonsynonymous","L5P K94E",2
"lib1","SARS-CoV-2","CACCTAATCCCTAAAA",5,37.8,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","R16C N64R G101T S139Y F167G",5
"lib1","SARS-CoV-2","CACCTAATGTAAAAAT",7,68.91,10.81,0.05,0.05,2.92,1.05,0,"1 nonsynonymous","V37N",1
"lib1","SARS-CoV-2","CACCTAATTATTTCAA",5,58.33,9.83,-0.94,0.09,2.76,1.09,0,">1 nonsynonymous","A14K L38F G155D",3
"lib1","SARS-CoV-2","CACCTACAACCCTTAA",4,57.53,10.41,-0.35,0.05,2.93,1.04,0,">1 nonsynonymous","P133S S184T",2
"lib1","SARS-CoV-2","CACCTACACATCCAAG",6,51.49,10.56,-0.21,0.03,2.95,1.02,0,">1 nonsynonymous","A42T V173D",2
"lib1","SARS-CoV-2","CACCTACCTAAAGACA",8,164.53,10.74,-0.03,0.07,2.93,1.04,0,">1 nonsynonymous","Y39V K56S",2
"lib1","SARS-CoV-2","CACCTACGCGAGCAGA",8,412.33,9.01,-1.75,0.06,2.6,1.11,0,">1 nonsynonymous","Q168T Y178I",2
"lib1","SARS-CoV-2","CACCTACTCATTACGA",13,0.67,NA,NA,NA,NA,NA,NA,"stop","F44L T63L P96*",3
"lib1","SARS-CoV-2","CACCTACTCTAAGCGG",2,21.73,6.95,-3.82,0.52,1.5,1.24,0.05,">1 nonsynonymous","T15M C31R L38R L60R",4
"lib1","SARS-CoV-2","CACCTAGCTGTCCTTG",2,20.65,10.28,-0.48,0.08,2.99,1,0,">1 nonsynonymous","F47I P54I K87L D97A K114R",5
"lib1","SARS-CoV-2","CACCTAGGAATAACAC",4,117.72,10.01,-0.75,0.05,2.69,1,0,">1 nonsynonymous","K128L Q144P N151L",3
"lib1","SARS-CoV-2","CACCTAGGACTTAAAA",5,23.28,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y93V L131R T201I",3
"lib1","SARS-CoV-2","CACCTAGTACATTCTT",11,176.71,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V37M L57R T63F N92R D98S",5
"lib1","SARS-CoV-2","CACCTATAAACGCCAT",2,0.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","CACCTATAGAGACAAA",5,1.93,NA,NA,NA,NA,NA,NA,"stop","G196*",1
"lib1","SARS-CoV-2","CACCTATATTTACAGG",1,21.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44S G86V N92V F167L C195I",5
"lib1","SARS-CoV-2","CACCTATCGAGTAAAA",2,19.7,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F99P R127I",2
"lib1","SARS-CoV-2","CACCTATGCTCAGATG",8,35.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14T F99S P149Y Q168L",4
"lib1","SARS-CoV-2","CACCTATTCATATCTA",1,1.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182Y",1
"lib1","SARS-CoV-2","CACCTATTCTCTCGCA",4,119.62,8.4,-2.36,0.16,2.71,1.07,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","CACCTCAAAAACCTTG",5,108.45,10.79,0.03,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCTCAAATACAAAA",5,106.49,10.13,-0.63,0.05,2.8,1.05,0,">1 nonsynonymous","G9Q D34G",2
"lib1","SARS-CoV-2","CACCTCAATAAAAGCA",4,66.26,9.36,-1.41,0.07,2.68,1.09,0,">1 nonsynonymous","F134E T170K",2
"lib1","SARS-CoV-2","CACCTCAATGGACCCT",6,72.89,6.39,-4.37,0.44,1.5,1.2,0.02,">1 nonsynonymous","A42K Y123T S139H P161A",4
"lib1","SARS-CoV-2","CACCTCACCTTGACAG",4,26.66,10.22,-0.55,0.12,2.78,1.04,0,">1 nonsynonymous","T3Q A22E I138P",3
"lib1","SARS-CoV-2","CACCTCAGAAATCGAT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","N64R Y66* L122S I142W",4
"lib1","SARS-CoV-2","CACCTCAGTTATACTA",9,5.23,NA,NA,NA,NA,NA,NA,"stop","W23* A105D P161Y",3
"lib1","SARS-CoV-2","CACCTCCACAGCGTGG",3,31.88,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90R L122N Y178R S184G",4
"lib1","SARS-CoV-2","CACCTCCACGGCAACT",6,110.19,6,-4.76,1.49,1.5,1.23,0.03,">1 nonsynonymous","K26P D137R T201R",3
"lib1","SARS-CoV-2","CACCTCCCAAAATAAA",4,87.13,9.81,-0.96,0.09,2.61,1.06,0,">1 nonsynonymous","E10W T46S K87T",3
"lib1","SARS-CoV-2","CACCTCCCGTAGTTAC",2,61.52,10.65,-0.12,0.04,2.86,1.02,0,">1 nonsynonymous","G116S T148L",2
"lib1","SARS-CoV-2","CACCTCCCTTCATACA",1,5.54,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","F47T N118L R127C",3
"lib1","SARS-CoV-2","CACCTCCTACTTCTGG",4,16.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13V D34Q G83V T100P A105E",5
"lib1","SARS-CoV-2","CACCTCCTGAAAGATC",1,50.44,10.17,-0.6,0.09,2.48,1,0,">1 nonsynonymous","Y39S V52P P149Q",3
"lib1","SARS-CoV-2","CACCTCCTTATGACAA",4,158.45,8.34,-2.42,0.17,1.96,1.13,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","CACCTCGAGATACCAA",6,126.87,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F12R Y175M",2
"lib1","SARS-CoV-2","CACCTCGGCCTGATAC",1,50.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D34R A105I R136L",3
"lib1","SARS-CoV-2","CACCTCTACAAACAAA",16,115.09,6.05,-4.72,0.92,1.5,1.25,0.02,">1 nonsynonymous","F99P K128H G146T",3
"lib1","SARS-CoV-2","CACCTCTATCTAATTA",3,64.67,9.92,-0.85,0.09,2.6,1.09,0,">1 nonsynonymous","A33R G116S S129E",3
"lib1","SARS-CoV-2","CACCTCTGAAGTTAAA",6,71.69,10.75,-0.02,0.05,2.88,1.02,0,"1 nonsynonymous","V37H",1
"lib1","SARS-CoV-2","CACCTCTTAAATACGG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35M N64F V77F P82F T148V",5
"lib1","SARS-CoV-2","CACCTGACAGCCATGT",7,0.19,NA,NA,NA,NA,NA,NA,"stop","K48* K56S P149V A190D",4
"lib1","SARS-CoV-2","CACCTGACCATCTTTA",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43H G155H",2
"lib1","SARS-CoV-2","CACCTGATATGCTACG",3,51.94,10.12,-0.64,0.09,2.66,1,0,">1 nonsynonymous","F44S L95I P149H",3
"lib1","SARS-CoV-2","CACCTGATGACCCGTA",2,52.03,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","S45Y I88K A145Q",3
"lib1","SARS-CoV-2","CACCTGCAGCCTATTC",2,24.17,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F62R G146V L183I",3
"lib1","SARS-CoV-2","CACCTGCAGTGGTCTA",6,4.04,NA,NA,NA,NA,NA,NA,"stop","S45G D98*",2
"lib1","SARS-CoV-2","CACCTGCCAACTAAAG",3,53.32,10.75,-0.02,0.06,2.96,1,0,"1 nonsynonymous","N110S",1
"lib1","SARS-CoV-2","CACCTGCCCACAGCAT",6,17.82,10.26,-0.51,0.05,2.94,1.02,0,">1 nonsynonymous","S45Y V115L P149Q",3
"lib1","SARS-CoV-2","CACCTGCGATATACTG",3,29.93,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","L5V S69K C158R",3
"lib1","SARS-CoV-2","CACCTGCGATCTGTTA",5,19.24,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N4P T85Y Q176P",3
"lib1","SARS-CoV-2","CACCTGCTAACCACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40C N58* Y159H",3
"lib1","SARS-CoV-2","CACCTGGACGAGTAAG",2,35.26,9.64,-1.12,0.12,2.14,1.04,0.01,">1 nonsynonymous","Y39S Y178A S184F P191N",4
"lib1","SARS-CoV-2","CACCTGGATATGAGAG",2,1.04,NA,NA,NA,NA,NA,NA,"stop","K132* T170S",2
"lib1","SARS-CoV-2","CACCTGTAAAGACAGT",11,115.61,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C49R K87G G155T",3
"lib1","SARS-CoV-2","CACCTGTACCAGTGCC",3,80.01,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14L Y39L D68L",3
"lib1","SARS-CoV-2","CACCTGTATCTTGGCA",2,0.61,NA,NA,NA,NA,NA,NA,"stop","S43K I104* G146Q",3
"lib1","SARS-CoV-2","CACCTGTCATGCTAAA",1,28.4,10.71,-0.06,0.1,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCTGTTACCTCACA",7,17.49,9.15,-1.61,0.19,2.11,1.06,0.02,">1 nonsynonymous","A42S C61L Q84R R127S",4
"lib1","SARS-CoV-2","CACCTTAACATGCCTA",1,57.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7Y F12L Y91T P161D F185G K198T",6
"lib1","SARS-CoV-2","CACCTTAACCAGCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* K87T Y123L",3
"lib1","SARS-CoV-2","CACCTTAAGAAACATA",7,3.89,NA,NA,NA,NA,NA,NA,"stop","T100* G146R",2
"lib1","SARS-CoV-2","CACCTTAATGGATATA",2,5.62,10.29,-0.47,0.4,1.5,1,0.04,">1 nonsynonymous","P7Y T15S S19G G83R",4
"lib1","SARS-CoV-2","CACCTTAATTCCGTTA",3,118.31,9.92,-0.84,0.16,1.86,1.06,0.01,">1 nonsynonymous","L162N Q168R",2
"lib1","SARS-CoV-2","CACCTTACATATTGCG",6,0.76,NA,NA,NA,NA,NA,NA,"stop","D97M T201*",2
"lib1","SARS-CoV-2","CACCTTACTCGTGATG",4,15.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V11Y K87R S108W",3
"lib1","SARS-CoV-2","CACCTTAGCCTCCCTA",13,5.87,NA,NA,NA,NA,NA,NA,"stop","V77* S108H A190P",3
"lib1","SARS-CoV-2","CACCTTAGCGCAGTTA",7,99.62,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S19M L38T F47W P54Q N107Y",5
"lib1","SARS-CoV-2","CACCTTAGTTAATCTA",4,1.4,NA,NA,NA,NA,NA,NA,"stop","P7R A89L D97F D112E T148*",5
"lib1","SARS-CoV-2","CACCTTATAAAGGTTC",3,31.65,10.38,-0.38,0.07,2.94,1.02,0,">1 nonsynonymous","T55L Q168M K198N",3
"lib1","SARS-CoV-2","CACCTTATAAGCTGAG",2,27.74,6.95,-3.81,0.37,1.5,1.14,0.03,">1 nonsynonymous","A14I G146P T201H",3
"lib1","SARS-CoV-2","CACCTTATAGAGCAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* A89P N130T P149G",4
"lib1","SARS-CoV-2","CACCTTATATAACTGC",2,18.97,10.79,0.02,0.13,2.92,1.01,0.01,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","CACCTTATATATTTCG",1,16.67,9.98,-0.78,0.1,2.72,1,0,">1 nonsynonymous","N1I T15L",2
"lib1","SARS-CoV-2","CACCTTATCAATAACG",18,157.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N118S Y159S",2
"lib1","SARS-CoV-2","CACCTTATCATTTCAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","F12N R27M S43V L60* L162E G174D V180K",7
"lib1","SARS-CoV-2","CACCTTCAAATGATTA",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W L38W Q168S",3
"lib1","SARS-CoV-2","CACCTTCAGAATCAGT",5,2.93,NA,NA,NA,NA,NA,NA,"stop","A89* F99M G174C",3
"lib1","SARS-CoV-2","CACCTTCCGCCTTGAA",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E D34T P161T F185S",4
"lib1","SARS-CoV-2","CACCTTCGCTATACAA",2,12.74,6.87,-3.89,0.2,1.7,1.03,0.01,">1 nonsynonymous","R25C S113Y",2
"lib1","SARS-CoV-2","CACCTTCTATACCTAT",1,0.86,NA,NA,NA,NA,NA,NA,"stop","E10V S41C P96R P149S K198*",5
"lib1","SARS-CoV-2","CACCTTCTCTTGTACA",2,0,NA,NA,NA,NA,NA,NA,"stop","S45I C61V F134D Q176* P197L",5
"lib1","SARS-CoV-2","CACCTTCTTAATCACC",1,18.76,10.85,0.09,0.08,2.98,1.02,0,"1 nonsynonymous","N40T",1
"lib1","SARS-CoV-2","CACCTTCTTTAGATAT",3,2.12,NA,NA,NA,NA,NA,NA,"stop","Y93V F99S Y119A C150*",4
"lib1","SARS-CoV-2","CACCTTCTTTTACAAC",7,35.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R K128A P149I Q176A",4
"lib1","SARS-CoV-2","CACCTTGAATTGATCT",10,51.81,7.99,-2.77,0.18,1.56,1.15,0.01,">1 nonsynonymous","A14E D90Y T100R N107A",4
"lib1","SARS-CoV-2","CACCTTGATGTGGTAA",11,76.56,6,-4.76,1.52,1.5,1.18,0.03,">1 nonsynonymous","G86S Y119R G146W V153L G174W",5
"lib1","SARS-CoV-2","CACCTTGCAGTCAGAT",1,239.16,10.7,-0.07,0.03,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACCTTGCCGTTTATC",2,27.56,8.67,-2.09,0.3,1.5,1,0.04,">1 nonsynonymous","A22W T85F P149S S164Y",4
"lib1","SARS-CoV-2","CACCTTGGTGCAGAAA",3,57.8,10.12,-0.64,0.06,2.84,1.05,0,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","CACCTTGGTTGACTAC",1,25.48,10.78,0.01,0.09,2.86,1.04,0,"1 nonsynonymous","V115R",1
"lib1","SARS-CoV-2","CACCTTGTACACAACA",5,67.14,9.97,-0.8,0.07,2.29,1.04,0,"1 nonsynonymous","V181M",1
"lib1","SARS-CoV-2","CACCTTGTAGAATATC",2,35.66,6.53,-4.24,0.56,1.5,1.08,0.03,">1 nonsynonymous","L95S P169L Y178L",3
"lib1","SARS-CoV-2","CACCTTGTATTTTGAA",5,88.2,9.63,-1.14,0.04,2.91,1.07,0,">1 nonsynonymous","I2V L38F L122R T140V T170N L188N T201G",7
"lib1","SARS-CoV-2","CACCTTGTCCTTTATA",1,12.89,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","K26L Y35P I142S T170H",4
"lib1","SARS-CoV-2","CACCTTTAAACTGAAA",1,15.74,10.74,-0.03,0.06,2.97,1.02,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","CACCTTTAATAAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T S43F P133T Q144S E154V S164F",6
"lib1","SARS-CoV-2","CACCTTTAATAATAAT",1,6.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A Q84T L122N R136S",4
"lib1","SARS-CoV-2","CACCTTTATATGTTAT",1,5.9,9.4,-1.37,0.32,2.23,1.01,0.05,">1 nonsynonymous","P82S P149A",2
"lib1","SARS-CoV-2","CACCTTTGAACAGCTT",6,119.49,9.32,-1.45,0.08,2.83,1.1,0,">1 nonsynonymous","S129E T170L K199N",3
"lib1","SARS-CoV-2","CACCTTTTAATACTTT",4,70.44,10.73,-0.03,0.07,2.87,1.09,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","CACCTTTTCCAGTATT",5,23.14,10.84,0.08,0.12,2.84,1.07,0,"1 nonsynonymous","S53M",1
"lib1","SARS-CoV-2","CACGAAAAAACTTTAG",6,44.34,6.6,-4.16,0.37,1.5,1.22,0.02,">1 nonsynonymous","N58I D112T",2
"lib1","SARS-CoV-2","CACGAAAAAATGCAAA",4,53.95,10.82,0.05,0.09,2.86,1,0,"1 nonsynonymous","V115W",1
"lib1","SARS-CoV-2","CACGAAAAAGAAACTA",7,61.15,10.77,0,0.09,2.89,1.03,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","CACGAAAAATCCTTGA",3,48.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M S45Q G51E S147L Q176K S200P",6
"lib1","SARS-CoV-2","CACGAAAACGGACGGT",12,84.94,9.32,-1.44,0.16,1.6,1.14,0.01,">1 nonsynonymous","E10S A33Q P54G K114F S139R",5
"lib1","SARS-CoV-2","CACGAAAATATGGTAC",2,25.75,6,-4.76,1.68,1.5,1.23,0.04,">1 nonsynonymous","A18I K128A T148N G152L Q168D G174K",6
"lib1","SARS-CoV-2","CACGAAACAACACCGC",2,19.54,10.6,-0.17,0.05,2.89,1.07,0,"1 nonsynonymous","Y123S",1
"lib1","SARS-CoV-2","CACGAAACATAGAAAC",1,1.64,NA,NA,NA,NA,NA,NA,"stop","C61P I88M D90S N107* Y123P",5
"lib1","SARS-CoV-2","CACGAAACGGGAAACA",4,1.3,NA,NA,NA,NA,NA,NA,"stop","A42W G117C P149*",3
"lib1","SARS-CoV-2","CACGAAACGTTATAAC",1,65.87,10.81,0.04,0.11,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGAAAGATTCTAAG",3,3.96,NA,NA,NA,NA,NA,NA,"stop","D59I T100W L122Y Y143L Q163*",5
"lib1","SARS-CoV-2","CACGAAAGTACCCCTA",8,60.39,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F8A F99K R136L",3
"lib1","SARS-CoV-2","CACGAAAGTACTGGAC",12,95.16,10.72,-0.04,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGAAATAACTCGAT",7,20.94,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y66T A89K Y123L",3
"lib1","SARS-CoV-2","CACGAAATACAGCGTT",3,65.05,10.85,0.08,0.1,2.87,1.09,0,"1 nonsynonymous","P197I",1
"lib1","SARS-CoV-2","CACGAACAAAATAAGT",3,100.01,10.68,-0.08,0.09,2.92,1.04,0,"1 nonsynonymous","K114R",1
"lib1","SARS-CoV-2","CACGAACAAATGATAC",6,91.57,6,-4.76,1.04,1.5,1.21,0.01,">1 nonsynonymous","L95P G101C",2
"lib1","SARS-CoV-2","CACGAACAGCTGACCA",2,40.86,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T15S L38Q Q84T A89K Y121A F134A T170N",7
"lib1","SARS-CoV-2","CACGAACCGCTAGCGC",5,3.37,NA,NA,NA,NA,NA,NA,"stop","E10* I104K S113T E135P",4
"lib1","SARS-CoV-2","CACGAACCGGCCAAAT",6,65.32,10.79,0.02,0.04,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CACGAACTAAACACAC",4,3.14,NA,NA,NA,NA,NA,NA,"stop","V37* F99C",2
"lib1","SARS-CoV-2","CACGAACTAAGCACAG",4,34.93,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2T A14L V37Y P54S T170I",5
"lib1","SARS-CoV-2","CACGAACTACACCAAA",5,36.66,10.76,-0.01,0.11,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGAACTGGCTAATT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","P82G Y121*",2
"lib1","SARS-CoV-2","CACGAAGAAACTATCC",4,6.62,6.79,-3.97,1.33,1.5,1.18,0.04,">1 nonsynonymous","A33D F44Y R78F S139Q P149R F160S H189P P191S K198G",9
"lib1","SARS-CoV-2","CACGAAGCTAATAACG",1,0.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","CACGAAGTATATTAAT",5,20.33,8.38,-2.39,0.39,1.5,1.06,0.08,">1 nonsynonymous","Y35D S69D",2
"lib1","SARS-CoV-2","CACGAAGTCACATGCA",2,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","CACGAAGTTAAAGAAA",5,41.43,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K48D D68R G116L G152S P169R",5
"lib1","SARS-CoV-2","CACGAAGTTTTACGAA",11,291.13,10.05,-0.71,0.06,2.72,1.04,0,">1 nonsynonymous","N120I I138P",2
"lib1","SARS-CoV-2","CACGAATAATTATATA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","Y91* N118K E141D Y175*",4
"lib1","SARS-CoV-2","CACGAATACATCCTCG",1,17.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L60R L131E Q144L",3
"lib1","SARS-CoV-2","CACGAATACTAAAAAG",8,222.39,10.42,-0.35,0.03,2.9,1.05,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","CACGAATAGAAAATGA",2,35.76,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6T V37I C158F R179G K199N",5
"lib1","SARS-CoV-2","CACGAATAGTTATTGG",11,74.51,9.47,-1.3,0.08,2.71,1.07,0,">1 nonsynonymous","L60P T170W",2
"lib1","SARS-CoV-2","CACGAATCCGTGGTTA",1,15.19,9.95,-0.81,0.22,2.08,1.03,0.01,">1 nonsynonymous","T55D Y91T N130M",3
"lib1","SARS-CoV-2","CACGAATCCTTATAAT",1,55.43,10.46,-0.3,0.08,2.95,1.01,0,">1 nonsynonymous","T46N D97P",2
"lib1","SARS-CoV-2","CACGAATCTGCTCCCG",3,73.03,8.63,-2.13,0.19,1.5,1.1,0.01,">1 nonsynonymous","F12E G83H",2
"lib1","SARS-CoV-2","CACGAATGCCGAGCAT",2,60.21,10.53,-0.23,0.05,2.97,1,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","CACGAATGTCCAACAA",8,115.97,10.81,0.04,0.04,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGAATTTTAAAGTT",9,96.17,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","C6E C31H G101V",3
"lib1","SARS-CoV-2","CACGACACAAATCCTA",9,4.2,NA,NA,NA,NA,NA,NA,"stop","K48S D98* V173Y",3
"lib1","SARS-CoV-2","CACGACACAATATGGG",1,8.45,8.84,-1.92,0.42,1.5,1,0.06,"1 nonsynonymous","P82E",1
"lib1","SARS-CoV-2","CACGACAGAGAAGTAA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","C49N A81* G116* S164F",4
"lib1","SARS-CoV-2","CACGACAGTATGCATA",13,165.87,8.67,-2.1,0.13,1.5,1.16,0.01,">1 nonsynonymous","R27V T63S K114E R127H F134M",5
"lib1","SARS-CoV-2","CACGACATAAGATAAA",5,51.78,10.81,0.04,0.06,2.93,1.04,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","CACGACATACTTCAAC",4,25.11,7.12,-3.64,0.18,1.5,1.05,0.01,">1 nonsynonymous","N1R C158G",2
"lib1","SARS-CoV-2","CACGACATATACAGAC",3,5.64,6.55,-4.22,0.77,1.5,1.03,0.06,">1 nonsynonymous","N13V V37R E76I N157H P177G",5
"lib1","SARS-CoV-2","CACGACATTGAAATAT",11,1.98,NA,NA,NA,NA,NA,NA,"stop","T3A Q84* T100M",3
"lib1","SARS-CoV-2","CACGACATTGTTAATA",5,57.89,6,-4.76,1.56,1.5,1.18,0.02,">1 nonsynonymous","G9K S41P C61N K94C W106R",5
"lib1","SARS-CoV-2","CACGACCTGACCAACT",1,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51L F160R",2
"lib1","SARS-CoV-2","CACGACCTTGTAACTG",5,55.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A18K D68L",2
"lib1","SARS-CoV-2","CACGACGACATACACT",5,42.94,10.79,0.02,0.08,2.91,1.03,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","CACGACGGCGCTCCCC",2,38.74,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","C102K Q163P",2
"lib1","SARS-CoV-2","CACGACTATGTCCTAT",1,26.56,10.66,-0.1,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGACTTGGTTGATA",9,92.34,9.43,-1.34,0.08,1.83,1.08,0,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","CACGACTTGTATGCCC",3,51.64,10.26,-0.51,0.05,2.93,1.02,0,">1 nonsynonymous","R16K K56G K87S",3
"lib1","SARS-CoV-2","CACGAGAACAATCGAA",1,7.71,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","N1T C61N P82G T100L G117S",5
"lib1","SARS-CoV-2","CACGAGAACCATTCTA",3,86.93,9.98,-0.78,0.05,2.61,1.02,0,">1 nonsynonymous","L60N R78M K128F",3
"lib1","SARS-CoV-2","CACGAGAAGTTTATGA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","S36* R124L S139R P161N N171*",5
"lib1","SARS-CoV-2","CACGAGAATCTATACT",2,41.42,8.07,-2.7,0.23,1.73,1.15,0.02,">1 nonsynonymous","I28T T100M F126Y L188M",4
"lib1","SARS-CoV-2","CACGAGACAATTCATG",9,61.37,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V71E K87S R127H G146M",4
"lib1","SARS-CoV-2","CACGAGACAGGAGACT",4,61.74,10.76,-0.01,0.06,2.94,1.03,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","CACGAGAGGCGAGACG",3,53.08,10.38,-0.39,0.06,2.9,1,0,">1 nonsynonymous","Q84G P169Y",2
"lib1","SARS-CoV-2","CACGAGATAAATTTCA",12,106.16,6,-4.76,1.05,1.5,1.19,0.02,">1 nonsynonymous","Y39A G117N D137R Y165F",4
"lib1","SARS-CoV-2","CACGAGATGAATAACA",5,1.89,NA,NA,NA,NA,NA,NA,"stop","T3Q A14* A22T K48* K132N S139R",6
"lib1","SARS-CoV-2","CACGAGCAAAAACCCG",5,72.67,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L60V G83K V115I K128Y F167P",5
"lib1","SARS-CoV-2","CACGAGCCAACCTAAA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","L131F R136*",2
"lib1","SARS-CoV-2","CACGAGGATAAAACAC",4,119.13,9.98,-0.78,0.07,2.53,1,0,">1 nonsynonymous","G9K P54N Y66S",3
"lib1","SARS-CoV-2","CACGAGGTCACGATAT",2,104.23,10.33,-0.43,0.03,2.89,1.02,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","CACGAGGTCCGTATAA",3,25.31,10.44,-0.33,0.08,2.83,1.09,0,">1 nonsynonymous","N4C D97I V173M",3
"lib1","SARS-CoV-2","CACGAGTCTGATACAA",5,47.61,10.72,-0.05,0.04,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGAGTTGCAGTTAA",3,15.25,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","W106G D112F N157A",3
"lib1","SARS-CoV-2","CACGATAAACAGACCA",1,51.93,10.6,-0.17,0.06,2.84,1.09,0,">1 nonsynonymous","T3R N40D N64T",3
"lib1","SARS-CoV-2","CACGATAACAGGAGAT",6,126.8,10.69,-0.07,0.04,2.86,1.05,0,">1 nonsynonymous","G152S P191R",2
"lib1","SARS-CoV-2","CACGATACCCACATAT",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50M T170L",2
"lib1","SARS-CoV-2","CACGATATAAGTTTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R R136A Q176P S200E",4
"lib1","SARS-CoV-2","CACGATATGTTAAAAT",6,146.2,10.2,-0.57,0.06,2.79,1.05,0,">1 nonsynonymous","F134N E141I",2
"lib1","SARS-CoV-2","CACGATCTATAAAATA",15,124.82,6,-4.76,1.61,1.5,1.21,0.01,">1 nonsynonymous","D75M F99N S184G",3
"lib1","SARS-CoV-2","CACGATGAGTACGTTA",4,47.37,10.85,0.08,0.09,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGATGCTAAGACTT",3,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K V77N I138R N157F",4
"lib1","SARS-CoV-2","CACGATGGAGACGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* F44V P54C K87C T140C",5
"lib1","SARS-CoV-2","CACGATGGGGAACGAA",8,61.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41F L57S F99A G152L F167S",5
"lib1","SARS-CoV-2","CACGATGTATATCAAC",2,4.1,NA,NA,NA,NA,NA,NA,"stop","I2V P7K R27N Q84* D112S G146I V173R L183M",8
"lib1","SARS-CoV-2","CACGATTATTAAACAT",2,13.93,6,-4.76,2,2.76,1.11,0,">1 nonsynonymous","P7I Y50L G152A",3
"lib1","SARS-CoV-2","CACGATTTAATATGTG",3,31.31,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G101V Y143W F156L",3
"lib1","SARS-CoV-2","CACGCAAAATTCACGG",3,31.53,9.4,-1.36,0.15,1.79,1.09,0.01,">1 nonsynonymous","K26M K56E S69L G83Q A105S",5
"lib1","SARS-CoV-2","CACGCAAACGCAAGAA",12,45.7,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T15R F99Y I142Q N157I S164V",5
"lib1","SARS-CoV-2","CACGCAAATATCCATC",1,13.58,10.22,-0.54,0.24,2.23,1,0.02,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","CACGCAAATGAGTGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S P96L E141S F167A G196I",5
"lib1","SARS-CoV-2","CACGCAAGCTTAAGGA",3,8.12,7.11,-3.65,0.42,1.5,1.1,0.04,">1 nonsynonymous","T15K Y35P T85P D98I D137G N151P",6
"lib1","SARS-CoV-2","CACGCAAGTGCGAAAT",2,1.87,NA,NA,NA,NA,NA,NA,"stop","T3E E10* S19K N64R G101S",5
"lib1","SARS-CoV-2","CACGCAATACGCCCAA",1,25.69,9.96,-0.81,0.1,2.41,1.01,0.01,">1 nonsynonymous","T3F S29L V37G",3
"lib1","SARS-CoV-2","CACGCAATGAAAACTT",1,11.77,10.27,-0.49,0.17,2.64,1,0.01,">1 nonsynonymous","V37S V77Q",2
"lib1","SARS-CoV-2","CACGCAATTCGCACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* S69V P82Q Y91C N120V",5
"lib1","SARS-CoV-2","CACGCACAGAGAGATT",2,24.9,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","N4S T15F T46R C61Y Y121F Q144P",6
"lib1","SARS-CoV-2","CACGCACCAAACTAGC",1,21.24,6.3,-4.46,0.67,1.5,1.14,0.02,">1 nonsynonymous","Y35L G86T F99L",3
"lib1","SARS-CoV-2","CACGCACCCAACAACT",10,177.28,10.74,-0.03,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGCACGAAGAACAC",3,11.48,7.95,-2.81,0.14,2.86,1.04,0.01,">1 nonsynonymous","L122K C158L",2
"lib1","SARS-CoV-2","CACGCAGTACCTGAAA",2,47.13,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I2V C49G L125R T148F N157I",5
"lib1","SARS-CoV-2","CACGCATACAAGATAC",1,10.79,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F8I F99I R124C G152L Q168L S200I",6
"lib1","SARS-CoV-2","CACGCATGCTCTTAAG",2,30.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2W G51T G116F R127S F160I",5
"lib1","SARS-CoV-2","CACGCCAAAGGTGAAA",5,60.13,9.75,-1.02,0.15,1.8,1.09,0.01,">1 nonsynonymous","C6H F62D G152S",3
"lib1","SARS-CoV-2","CACGCCAACAATCTTC",4,53.9,10.83,0.07,0.07,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CACGCCAACTACTTGG",3,57.03,10.79,0.03,0.06,2.96,1.02,0,">1 nonsynonymous","I28F T100C",2
"lib1","SARS-CoV-2","CACGCCACGGCCCCGA",2,37.69,10.72,-0.05,0.11,2.85,1.12,0,"1 nonsynonymous","K128H",1
"lib1","SARS-CoV-2","CACGCCAGAAATAGTA",5,108.14,10.63,-0.14,0.03,2.94,1.01,0,"1 nonsynonymous","E10T",1
"lib1","SARS-CoV-2","CACGCCCCATAACCGC",2,30.51,10.78,0.02,0.06,3,1.01,0,"1 nonsynonymous","K114E",1
"lib1","SARS-CoV-2","CACGCCCCCCAATCAT",1,15.3,10.63,-0.13,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGCCCTCAGTTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10L K26L D59A D68K Q84* V103F N120E Q144K G166Q",9
"lib1","SARS-CoV-2","CACGCCGAATTTCTAA",2,52.78,10.28,-0.48,0.04,2.84,1.08,0,">1 nonsynonymous","T3K S45H C61G",3
"lib1","SARS-CoV-2","CACGCCTAGAACGCCC",3,136.41,10.65,-0.12,0.03,2.94,1.02,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","CACGCGAATAACATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L T55Y R78L F99S L122Y",5
"lib1","SARS-CoV-2","CACGCGAGAGGCGCCA",6,20.69,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6S R73P G83N S113Y",4
"lib1","SARS-CoV-2","CACGCGATAGAAGCGC",5,12.45,7.62,-3.14,0.38,1.5,1.09,0.06,">1 nonsynonymous","Y119C V153E Q176L",3
"lib1","SARS-CoV-2","CACGCGATAGTAGTCA",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L R124V Q168G",3
"lib1","SARS-CoV-2","CACGCGGCTCGATAAT",5,77.29,10.72,-0.05,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGCGGTAGACTGAA",1,20.79,10.27,-0.5,0.12,2.97,1.01,0.01,">1 nonsynonymous","N64R K128C",2
"lib1","SARS-CoV-2","CACGCGTTACAATATC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","F44N D112*",2
"lib1","SARS-CoV-2","CACGCGTTCTAGTTAA",6,29.53,6.19,-4.58,0.47,1.5,1.1,0.02,">1 nonsynonymous","I142S F167M",2
"lib1","SARS-CoV-2","CACGCTAACAGTACTG",6,48.86,9.92,-0.85,0.07,2.08,1.05,0,">1 nonsynonymous","N1E R136E",2
"lib1","SARS-CoV-2","CACGCTAATCCCATCC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","D90* T100G S139K Q144S",4
"lib1","SARS-CoV-2","CACGCTAGAGGTCCCA",3,17.27,6.6,-4.17,0.32,1.5,1.07,0.01,">1 nonsynonymous","I28T F99G",2
"lib1","SARS-CoV-2","CACGCTATGGTATCAA",2,54.04,10.75,-0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGCTATTGTAAATT",12,161.12,8.75,-2.01,0.11,2.33,1.13,0.01,">1 nonsynonymous","A42L K114V I142R",3
"lib1","SARS-CoV-2","CACGCTGTAGACATAT",5,124.61,8.47,-2.29,0.13,1.67,1.15,0.01,">1 nonsynonymous","F17S Y121L",2
"lib1","SARS-CoV-2","CACGCTGTCGCAAAAG",3,14.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37R K56C Y91H E141F S164C",5
"lib1","SARS-CoV-2","CACGCTTATACCGTTC",7,114.11,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V11T G117S G166P",3
"lib1","SARS-CoV-2","CACGCTTCGTAAATGA",3,52.89,10.06,-0.7,0.07,2.16,1.02,0,">1 nonsynonymous","A81T T100S",2
"lib1","SARS-CoV-2","CACGCTTTAGAAACCC",5,50.7,10.41,-0.36,0.07,2.84,1.03,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","CACGGAAAAGGGTTAC",9,19.13,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","G146V V180R",2
"lib1","SARS-CoV-2","CACGGAAAATAATAAA",1,6.99,10.94,0.17,0.14,2.98,1,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","CACGGAAACTACAGGT",10,47.96,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F70K D112W",2
"lib1","SARS-CoV-2","CACGGACCAAAACAAC",2,75.2,10.66,-0.1,0.04,2.92,1.03,0,"1 nonsynonymous","Y123V",1
"lib1","SARS-CoV-2","CACGGATAATGCCCAC",4,151.96,6.03,-4.74,0.73,1.5,1.2,0.01,">1 nonsynonymous","T15V F156H G172A",3
"lib1","SARS-CoV-2","CACGGATACGCGTGGA",4,80.98,10.56,-0.21,0.05,2.87,1.09,0,"1 nonsynonymous","Q84C",1
"lib1","SARS-CoV-2","CACGGATTATGTACAT",4,80.42,8.66,-2.1,0.2,1.5,1.13,0.01,">1 nonsynonymous","V32T G51I L60K",3
"lib1","SARS-CoV-2","CACGGATTGTCAATAA",2,29.98,7.17,-3.6,0.2,1.5,1.13,0.01,">1 nonsynonymous","C6S Y21H Y119W S184C",4
"lib1","SARS-CoV-2","CACGGCAATCGAAAAG",4,16.43,6.05,-4.71,1.05,1.5,1.19,0.03,">1 nonsynonymous","C49Y S69M V103Q",3
"lib1","SARS-CoV-2","CACGGCAATGCCAACA",5,1.72,NA,NA,NA,NA,NA,NA,"stop","A22* Y35L V71W V115F",4
"lib1","SARS-CoV-2","CACGGCAGGGTAATCC",5,68.71,10.61,-0.16,0.1,2.75,1.23,0,"1 nonsynonymous","S129K",1
"lib1","SARS-CoV-2","CACGGCGATAAAAAAA",4,161.87,10.72,-0.04,0.05,2.92,1.05,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","CACGGGATTGAACAAC",3,26.69,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Q84H G101P K114Y",3
"lib1","SARS-CoV-2","CACGGGCCCGAGAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A Y119S T148A",3
"lib1","SARS-CoV-2","CACGGGCGCGTGAAAA",1,47.39,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D97V Q144R G172K",3
"lib1","SARS-CoV-2","CACGGGCTACTCGCTA",7,2.76,NA,NA,NA,NA,NA,NA,"stop","S69* Q176*",2
"lib1","SARS-CoV-2","CACGGGGATCTAATTC",3,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L D90S I104Q V180S",4
"lib1","SARS-CoV-2","CACGGGGCACCCGTGA",1,8.62,9.61,-1.16,0.33,1.5,1,0.04,">1 nonsynonymous","S45A P82L",2
"lib1","SARS-CoV-2","CACGGGGCGGTTATTG",2,70.96,10.29,-0.47,0.04,2.92,1,0,">1 nonsynonymous","V11I D97P K114N K128L V153T T201M",6
"lib1","SARS-CoV-2","CACGGTAACTAATGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","V37* E186C",2
"lib1","SARS-CoV-2","CACGGTACTCTAAGAG",1,28.2,10.71,-0.06,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACGGTACTTCGAGCT",2,74.2,8.73,-2.03,0.13,2.19,1.1,0.01,">1 nonsynonymous","G9Q V37R Y91Q G174E",4
"lib1","SARS-CoV-2","CACGGTAGATGAACGT",1,38.44,10.75,-0.01,0.05,2.92,1.04,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","CACGGTCAATTACGAG",6,95.7,6.63,-4.13,0.47,1.5,1.15,0.03,">1 nonsynonymous","K87T F99W R124W",3
"lib1","SARS-CoV-2","CACGGTCACTTGTCAC",5,23.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33V Q79K Y121R",3
"lib1","SARS-CoV-2","CACGGTGCGCCAAGAC",15,220.65,10.79,0.03,0.04,2.9,1.03,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","CACGGTGGAAATAGCA",2,108.46,8.75,-2.01,0.11,2.27,1.12,0,">1 nonsynonymous","N120M P161T",2
"lib1","SARS-CoV-2","CACGGTGGTAAGGCTT",6,0.33,NA,NA,NA,NA,NA,NA,"stop","V115* L122E",2
"lib1","SARS-CoV-2","CACGGTTCCTGTGTAT",3,22.13,7,-3.77,0.27,1.99,1.1,0.02,">1 nonsynonymous","C6W Y35M D112I S129T N151S",5
"lib1","SARS-CoV-2","CACGGTTGTCCAACAA",3,55.32,6,-4.76,1.37,1.5,1.21,0.02,">1 nonsynonymous","T46Q S113C T170I",3
"lib1","SARS-CoV-2","CACGGTTGTTTCTATT",1,10.54,6,-4.76,2,3,1.31,0.04,">1 nonsynonymous","L57A N107I L122Q",3
"lib1","SARS-CoV-2","CACGTAAAAAATACAG",2,0.57,NA,NA,NA,NA,NA,NA,"stop","D98A N107P K199*",3
"lib1","SARS-CoV-2","CACGTAAAACGTGATA",2,37.35,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G51K L60G K94A C158L",4
"lib1","SARS-CoV-2","CACGTAAAATAACTGA",9,79,10.7,-0.06,0.09,2.88,1.05,0,">1 nonsynonymous","V37T K128S T140L",3
"lib1","SARS-CoV-2","CACGTAACCAAAAGAG",3,7.52,8.94,-1.83,0.26,2.69,1.18,0.02,">1 nonsynonymous","S19N K87W T140I",3
"lib1","SARS-CoV-2","CACGTAACCATGCCAA",3,48.93,6,-4.76,0.95,1.5,1.12,0,">1 nonsynonymous","L38W S113L I138Y P197L",4
"lib1","SARS-CoV-2","CACGTAACCGTGACAA",1,20.89,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R25M T170I Y175C L188I",4
"lib1","SARS-CoV-2","CACGTAACCGTTTATC",2,44.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9N F167P",2
"lib1","SARS-CoV-2","CACGTAAGAAATATTC",2,24.65,6,-4.76,1.73,3,1.1,0,">1 nonsynonymous","R25V I142N",2
"lib1","SARS-CoV-2","CACGTAAGAGGACACA",3,1.16,NA,NA,NA,NA,NA,NA,"stop","N1R L57V D90I D97* N107K T148E",6
"lib1","SARS-CoV-2","CACGTAAGCAGTACAA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M D59P Y91T E186P",4
"lib1","SARS-CoV-2","CACGTAATAACACGCG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CACGTAATTAGACGCC",3,44.17,8.8,-1.97,0.08,2.54,1.03,0,">1 nonsynonymous","G9T Y143T",2
"lib1","SARS-CoV-2","CACGTAATTTTAACCC",1,5.54,6.74,-4.03,2,3,1.08,0,">1 nonsynonymous","W106G G117V",2
"lib1","SARS-CoV-2","CACGTACAACCACCAA",4,69.86,10.38,-0.39,0.07,2.79,1,0,"1 nonsynonymous","N13W",1
"lib1","SARS-CoV-2","CACGTACATACCCTAA",3,40.51,10.88,0.12,0.08,2.81,1.09,0,">1 nonsynonymous","V37F D97N",2
"lib1","SARS-CoV-2","CACGTACATCCAGTCA",5,19.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R136Y G146I",2
"lib1","SARS-CoV-2","CACGTACCAATTTACA",13,77.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L60S D97V S113P D137S",4
"lib1","SARS-CoV-2","CACGTACCCAATTCTA",5,6.41,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N64S I88L D137G P197T",4
"lib1","SARS-CoV-2","CACGTACTTATCATGG",4,40.09,9.86,-0.9,0.1,2.46,1.03,0,">1 nonsynonymous","P96Q F160N",2
"lib1","SARS-CoV-2","CACGTATACCAGAACC",2,17.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F44D I88Y T100S R136I T170V",5
"lib1","SARS-CoV-2","CACGTATCTGGTTATT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","S29*",1
"lib1","SARS-CoV-2","CACGTATGTGTACCGC",6,262.59,10.66,-0.1,0.04,2.88,1.06,0,"1 nonsynonymous","Y175F",1
"lib1","SARS-CoV-2","CACGTATTTCTAGTAA",4,53.73,6.17,-4.59,0.99,1.5,1.28,0.04,">1 nonsynonymous","F17K N64G T100R",3
"lib1","SARS-CoV-2","CACGTATTTGAAGCTG",7,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H F99C Y123E Y165G F185A T201W",6
"lib1","SARS-CoV-2","CACGTCAAAGAAAACT",1,41.23,NA,NA,NA,NA,NA,NA,"stop","R16S L57* D97F Y119P",4
"lib1","SARS-CoV-2","CACGTCAAATCAACGA",5,0.82,NA,NA,NA,NA,NA,NA,"stop","S41* I104D",2
"lib1","SARS-CoV-2","CACGTCACCACTCAAG",4,2.78,NA,NA,NA,NA,NA,NA,"stop","D34L F99* L125Y",3
"lib1","SARS-CoV-2","CACGTCAGCAAACGCG",2,60.72,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F17T C31T Q79A Y143R A192E",5
"lib1","SARS-CoV-2","CACGTCATACTTTCCA",13,178.06,10.41,-0.36,0.05,2.92,1.01,0,">1 nonsynonymous","D59K I142F",2
"lib1","SARS-CoV-2","CACGTCATTTATGGCA",3,69.57,6.77,-4,0.35,1.5,1.18,0.02,">1 nonsynonymous","G172D K198V",2
"lib1","SARS-CoV-2","CACGTCCAACTTGACT",2,14.16,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","L60V V115F K132A T148Y Y165Q",5
"lib1","SARS-CoV-2","CACGTCCCACGGCGAG",1,28.36,9.54,-1.23,0.42,1.5,1,0.06,">1 nonsynonymous","V20D S129A",2
"lib1","SARS-CoV-2","CACGTCTAACAACCTA",3,28.58,10.08,-0.68,0.1,2.72,1.05,0,">1 nonsynonymous","P133Q P149K",2
"lib1","SARS-CoV-2","CACGTCTCAACGAGAA",12,109.83,9.54,-1.23,0.14,1.63,1.1,0.01,">1 nonsynonymous","F12R F62Y",2
"lib1","SARS-CoV-2","CACGTCTCTAGTAACT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53M A81I C150S C158Y",4
"lib1","SARS-CoV-2","CACGTCTTCATCGCCT",1,1.3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CACGTGAAACCCAGTC",4,56.41,9.92,-0.84,0.05,2.93,1,0,">1 nonsynonymous","G83L K94R F156Y",3
"lib1","SARS-CoV-2","CACGTGAGGCATCGAC",5,98.75,10.54,-0.23,0.05,2.86,1.06,0,"1 nonsynonymous","S164V",1
"lib1","SARS-CoV-2","CACGTGCAAAAAAAAA",4,29.83,10.05,-0.71,0.14,1.99,1.07,0.01,">1 nonsynonymous","F47L I104T T193I",3
"lib1","SARS-CoV-2","CACGTGCACATGCATT",2,32.58,7.48,-3.28,0.29,1.5,1.18,0.02,">1 nonsynonymous","D90W W106S",2
"lib1","SARS-CoV-2","CACGTGGACTGACTTT",1,4.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N24E",1
"lib1","SARS-CoV-2","CACGTTAAACCACCCT",1,54.52,10.37,-0.39,0.06,2.86,1.05,0,"1 nonsynonymous","Y91C",1
"lib1","SARS-CoV-2","CACGTTAAATGTTGTG",1,0.6,NA,NA,NA,NA,NA,NA,"stop","L5A Y123*",2
"lib1","SARS-CoV-2","CACGTTAACTCACGAG",1,53.71,9.95,-0.81,0.12,2.45,1.02,0.01,">1 nonsynonymous","Y50W D90S T100S G116A",4
"lib1","SARS-CoV-2","CACGTTAATAATAAGA",9,247.87,9.35,-1.41,0.11,1.96,1.1,0,">1 nonsynonymous","N13Y G155C",2
"lib1","SARS-CoV-2","CACGTTACTAACGACC",6,141.35,10.24,-0.52,0.05,2.81,1.02,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","CACGTTAGAAACTTCA",6,56.02,6,-4.76,1.93,1.5,1.18,0.02,">1 nonsynonymous","N1D G9R S53L S129M R179M",5
"lib1","SARS-CoV-2","CACGTTAGAACCTCAA",3,110.05,10.23,-0.53,0.07,2.87,1.06,0,">1 nonsynonymous","T15R K87L",2
"lib1","SARS-CoV-2","CACGTTAGAATCAAAT",3,145.4,6.59,-4.18,0.35,1.5,1.19,0.01,">1 nonsynonymous","V37M G86S P177A",3
"lib1","SARS-CoV-2","CACGTTATGTGATACA",3,104.13,9.76,-1.01,0.09,2.02,1.05,0,">1 nonsynonymous","C61R A89Y",2
"lib1","SARS-CoV-2","CACGTTCACATCAAAT",1,18.42,10.07,-0.69,0.14,2.67,1.05,0.01,">1 nonsynonymous","V32R G146S G152V",3
"lib1","SARS-CoV-2","CACGTTCGACCCGCCA",2,86.06,9.63,-1.13,0.17,1.74,1.15,0.01,">1 nonsynonymous","I28R S200Y",2
"lib1","SARS-CoV-2","CACGTTGACATGGCTT",5,19.4,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F12T Y66S Y121V E141S P169L",5
"lib1","SARS-CoV-2","CACGTTGATACTCTGT",13,159.34,10.61,-0.16,0.04,2.91,1.03,0,">1 nonsynonymous","N4I T201K",2
"lib1","SARS-CoV-2","CACGTTGATGCTACGA",4,58.23,10.59,-0.17,0.06,2.86,1.07,0,">1 nonsynonymous","S53L R78S T201Q",3
"lib1","SARS-CoV-2","CACGTTGGTACTAGAG",9,37.99,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","L57K A81V N107A Y121F",4
"lib1","SARS-CoV-2","CACGTTTAAACAGTGC",8,83.29,9.32,-1.44,0.1,2.64,1.12,0,">1 nonsynonymous","C61T K114N V115M Q144T",4
"lib1","SARS-CoV-2","CACGTTTACCATATAT",2,19.82,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6M N13D V52M Y119L P149K",5
"lib1","SARS-CoV-2","CACGTTTCGCGATGCG",1,23.24,8.26,-2.5,0.25,1.87,1.1,0.02,">1 nonsynonymous","N157K T170Q",2
"lib1","SARS-CoV-2","CACTAAAAATGGCCAT",8,1.05,NA,NA,NA,NA,NA,NA,"stop","G9R A18T T100F V115*",4
"lib1","SARS-CoV-2","CACTAAAACATGCGAC",1,59.14,10.62,-0.15,0.03,2.94,1.02,0,">1 nonsynonymous","P54L F62S V153M",3
"lib1","SARS-CoV-2","CACTAAAACGAAGCGA",3,51.58,10.6,-0.16,0.08,2.89,1.06,0,"1 nonsynonymous","E135G",1
"lib1","SARS-CoV-2","CACTAAAACGAGGCAA",4,44.93,10.68,-0.08,0.04,2.96,1.02,0,">1 nonsynonymous","S147T G152R",2
"lib1","SARS-CoV-2","CACTAAAAGAGGATCA",4,32.99,10.69,-0.08,0.04,2.97,1.04,0,"1 nonsynonymous","T140C",1
"lib1","SARS-CoV-2","CACTAAAATAAAGATC",2,87.16,9.2,-1.57,0.05,2.89,1.08,0,"1 nonsynonymous","G117E",1
"lib1","SARS-CoV-2","CACTAAAATAATACTA",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65R Q84R Y119G Q176W",4
"lib1","SARS-CoV-2","CACTAAAATCCAAACA",3,28.87,10.47,-0.29,0.06,2.87,1.08,0,">1 nonsynonymous","C61S S129Y",2
"lib1","SARS-CoV-2","CACTAAAATTATGTAT",3,38.62,10.4,-0.37,0.06,2.87,1,0,">1 nonsynonymous","I80V S129L T201A",3
"lib1","SARS-CoV-2","CACTAAAGCTTACCCG",2,60.08,10.1,-0.67,0.06,2.7,1.02,0,">1 nonsynonymous","N4A Y35Q",2
"lib1","SARS-CoV-2","CACTAAAGCTTTAGTC",1,13.21,7.33,-3.44,0.17,2.27,1.09,0.01,">1 nonsynonymous","C158N T201E",2
"lib1","SARS-CoV-2","CACTAAATAACACAAA",9,83.42,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T63S D68S Y143N",3
"lib1","SARS-CoV-2","CACTAAATAAGCCCCG",2,47.58,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S36I G83T N107W C158R",4
"lib1","SARS-CoV-2","CACTAAATATAGTGCA",10,65.8,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","L95G",1
"lib1","SARS-CoV-2","CACTAAATGTGTCCCT",2,26.19,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","Y35H Y50E V103N Y121F",4
"lib1","SARS-CoV-2","CACTAAATTACGCAGA",2,43.18,10.67,-0.1,0.03,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTAAATTATAAAAG",7,96.74,10.68,-0.09,0.06,2.9,1.04,0,">1 nonsynonymous","N1P P149M",2
"lib1","SARS-CoV-2","CACTAACAAAGCTTGA",5,34.14,6,-4.76,1.97,1.5,1.2,0.04,">1 nonsynonymous","C6N N30Y C49L A145R K199L",5
"lib1","SARS-CoV-2","CACTAACCACTATCGG",6,124.31,10.66,-0.11,0.04,2.94,1.04,0,">1 nonsynonymous","K114R S129C",2
"lib1","SARS-CoV-2","CACTAACCTAAATCAA",6,1.21,NA,NA,NA,NA,NA,NA,"stop","Y21* G51S D97L S139E Y159A",5
"lib1","SARS-CoV-2","CACTAACCTGACGACT",1,7.89,10.14,-0.62,0.22,2.42,1.01,0.01,">1 nonsynonymous","Q84K P133M",2
"lib1","SARS-CoV-2","CACTAACCTTCACGAT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib1","SARS-CoV-2","CACTAACGATGACGAC",5,60.78,10.19,-0.57,0.06,2.7,1.04,0,"1 nonsynonymous","I72T",1
"lib1","SARS-CoV-2","CACTAACGCTACAAGG",9,144.52,10.78,0.01,0.05,2.92,1.04,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","CACTAACGGAATTTCC",7,0.13,NA,NA,NA,NA,NA,NA,"stop","A14G R25* D34V E141Q V153R",5
"lib1","SARS-CoV-2","CACTAACTCAAGCTGA",2,45.63,9.14,-1.62,0.07,2.83,1.1,0,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","CACTAACTTCATAGTG",5,67.94,10.79,0.03,0.07,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CACTAACTTTCTCCCG",5,25.94,6.74,-4.02,0.48,1.5,1.18,0.02,">1 nonsynonymous","S41F Y93M",2
"lib1","SARS-CoV-2","CACTAAGACAAACGAA",2,10.96,10.23,-0.54,0.08,2.78,1,0,">1 nonsynonymous","S53F K56N C61I N110V T201G",5
"lib1","SARS-CoV-2","CACTAAGCAATATACA",2,105.75,9.66,-1.1,0.07,2.78,1.07,0,">1 nonsynonymous","F44A K56E T170K",3
"lib1","SARS-CoV-2","CACTAAGCAATTTCGG",1,0.44,NA,NA,NA,NA,NA,NA,"stop","S69L Y143*",2
"lib1","SARS-CoV-2","CACTAAGCCTTCTTCA",5,47.17,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V20Q G86S G117Q G146S",4
"lib1","SARS-CoV-2","CACTAAGCGAAGGCAT",5,43.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6R K94V T170R",3
"lib1","SARS-CoV-2","CACTAAGCGAGTCTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5T P149*",2
"lib1","SARS-CoV-2","CACTAAGCGGTGCATG",1,17.35,6.86,-3.9,0.29,1.5,1.05,0.02,">1 nonsynonymous","K87Y N107R Q144L",3
"lib1","SARS-CoV-2","CACTAAGCGTTAAGGC",1,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12D",1
"lib1","SARS-CoV-2","CACTAAGCTGTTTTAC",2,55.12,8.43,-2.34,0.19,2.77,1.05,0.01,"1 nonsynonymous","Q176G",1
"lib1","SARS-CoV-2","CACTAAGGGCATATGA",2,36.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P Y165T",2
"lib1","SARS-CoV-2","CACTAAGTGCCCCCCC",4,100.25,10.54,-0.23,0.05,2.82,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CACTAATACACTACCC",1,7.69,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","W106D P133K Q168T",3
"lib1","SARS-CoV-2","CACTAATACTAAACAA",3,1.82,NA,NA,NA,NA,NA,NA,"stop","K48* P133N P177*",3
"lib1","SARS-CoV-2","CACTAATACTGCCCCA",5,49.39,10.73,-0.04,0.06,2.96,1.01,0,">1 nonsynonymous","P54R P149T",2
"lib1","SARS-CoV-2","CACTAATATAATTTAT",3,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118Q G166H",2
"lib1","SARS-CoV-2","CACTAATATATACAAG",3,58.23,9.48,-1.29,0.07,2.83,1.07,0,">1 nonsynonymous","Y119T G196L",2
"lib1","SARS-CoV-2","CACTAATATATAGAGA",2,13.18,11.1,0.34,0.11,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTAATATTTACAAA",4,49.83,10.65,-0.12,0.05,2.92,1,0,">1 nonsynonymous","Y66H T100I",2
"lib1","SARS-CoV-2","CACTAATCCATCCAAA",1,79.52,9.3,-1.47,0.08,2.87,1.09,0,">1 nonsynonymous","I2N V37I N157G T201R",4
"lib1","SARS-CoV-2","CACTAATGGATTCACT",3,88.15,10.19,-0.57,0.04,2.94,1.02,0,">1 nonsynonymous","K26S V37L F156R",3
"lib1","SARS-CoV-2","CACTAATTTCGAGGTA",2,14.9,10.1,-0.66,0.14,2.26,1,0.01,">1 nonsynonymous","V11P A42Q T55N",3
"lib1","SARS-CoV-2","CACTACAAAAACGTTG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I A42S N120V F160L",4
"lib1","SARS-CoV-2","CACTACAAAATTGCCT",7,122.58,9.19,-1.57,0.05,2.85,1.09,0,">1 nonsynonymous","Y119S G152Y",2
"lib1","SARS-CoV-2","CACTACAAATTCCAGG",4,77.44,10.6,-0.17,0.07,2.92,1,0,">1 nonsynonymous","L60H S184C",2
"lib1","SARS-CoV-2","CACTACAATGAAATTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","K26T Y121* V173S",3
"lib1","SARS-CoV-2","CACTACACATAGACAA",7,14.28,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F12Y D90L P133S",3
"lib1","SARS-CoV-2","CACTACACATGACAAA",2,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24K G116H L122C Q176L",4
"lib1","SARS-CoV-2","CACTACACGATATACT",2,101.97,7.83,-2.93,0.22,1.57,1.21,0.01,">1 nonsynonymous","R16F Y159C",2
"lib1","SARS-CoV-2","CACTACACTCTATGAC",3,34.04,10.05,-0.71,0.12,1.97,1.04,0,">1 nonsynonymous","L5K V37K L131A A190T",4
"lib1","SARS-CoV-2","CACTACAGAAAAAAAA",6,28.7,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","T46S C61E T85F I88K I138L T170M",6
"lib1","SARS-CoV-2","CACTACATAACGTATA",5,1.12,NA,NA,NA,NA,NA,NA,"stop","G9* R27S N120L",3
"lib1","SARS-CoV-2","CACTACATGGGATATC",6,60.12,10.73,-0.03,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTACCATACATCCC",1,128.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P133S V180S",2
"lib1","SARS-CoV-2","CACTACCATTTCGTAT",4,14.21,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","Y93H K114G R124Y",3
"lib1","SARS-CoV-2","CACTACCATTTCTCGA",2,88.43,10.59,-0.17,0.11,2.75,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CACTACCCTTAGAAAG",8,63.03,10.76,0,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTACCTTCGTAGAA",3,11.78,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A89R D98F",2
"lib1","SARS-CoV-2","CACTACGGCTTCCTTA",4,36.09,9.39,-1.37,0.1,2.2,1.13,0,">1 nonsynonymous","T63S N107T",2
"lib1","SARS-CoV-2","CACTACGTAACCACTG",6,62.79,10.69,-0.07,0.06,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CACTACGTCTATACCT",6,101.42,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A67G K87E N118V",3
"lib1","SARS-CoV-2","CACTACTACCGCCAGA",2,91.58,8.32,-2.45,0.12,1.98,1.09,0.01,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","CACTACTAGACATGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50* S200N",2
"lib1","SARS-CoV-2","CACTACTAGGCAGTAA",4,44.41,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","R25C L95I A105G",3
"lib1","SARS-CoV-2","CACTACTATACCAAAA",4,30.04,10.92,0.16,0.09,2.88,1.04,0,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","CACTACTCACAAGTAA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","D112* F126*",2
"lib1","SARS-CoV-2","CACTACTGTCTGGCCA",8,8.75,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15Y V77E",2
"lib1","SARS-CoV-2","CACTACTTATGGCCTA",2,31,9.84,-0.93,0.17,1.74,1.07,0.02,">1 nonsynonymous","V37M L95T F134L",3
"lib1","SARS-CoV-2","CACTAGAATAAGAACA",3,7.28,6.76,-4,2,3,1.3,0,">1 nonsynonymous","C49L D59L A67S K87T D97M L122R",6
"lib1","SARS-CoV-2","CACTAGACACTGGTAT",3,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I N64F S113R",3
"lib1","SARS-CoV-2","CACTAGACGACAAAGC",2,27.48,10.83,0.06,0.09,2.92,1.05,0,">1 nonsynonymous","V37R L131I",2
"lib1","SARS-CoV-2","CACTAGACGCTACCTG",8,0.7,NA,NA,NA,NA,NA,NA,"stop","F47I Y165T K198*",3
"lib1","SARS-CoV-2","CACTAGACTTATAATG",4,34.46,10.85,0.08,0.09,2.94,1.02,0,"1 nonsynonymous","S129G",1
"lib1","SARS-CoV-2","CACTAGAGACAATGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P N58P N107C Y123S",4
"lib1","SARS-CoV-2","CACTAGAGGCATTAAA",7,56.91,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N58S Y93N",2
"lib1","SARS-CoV-2","CACTAGATAAAGTAAT",8,57.51,10.3,-0.46,0.09,2.24,1,0,"1 nonsynonymous","E76G",1
"lib1","SARS-CoV-2","CACTAGATATTAACGA",5,36.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","CACTAGATGCATACGA",3,15.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1S P96L R127V",3
"lib1","SARS-CoV-2","CACTAGATTTCGGACC",9,104.98,10.3,-0.46,0.04,2.84,1.04,0,">1 nonsynonymous","C61S T85P",2
"lib1","SARS-CoV-2","CACTAGCAAACGAAGT",4,28.84,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V37L S43Y A89F Y119L F156K",5
"lib1","SARS-CoV-2","CACTAGCAACTACTTT",3,11.62,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","S19F T55S L122Y G155M",4
"lib1","SARS-CoV-2","CACTAGCACCGAAACA",7,27.16,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G86Y G117P V181F",3
"lib1","SARS-CoV-2","CACTAGGATCATTACC",3,33.66,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59T S69V G86Q D97M",4
"lib1","SARS-CoV-2","CACTAGGCAATACGCC",1,19.96,10.79,0.02,0.04,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTAGGTCATCAGAT",2,17.27,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","R124A N171I",2
"lib1","SARS-CoV-2","CACTAGTAAACACTTA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58P I104E",2
"lib1","SARS-CoV-2","CACTAGTACTCCTCAC",6,92.73,10.11,-0.66,0.04,2.93,1,0,">1 nonsynonymous","T3G F156Q",2
"lib1","SARS-CoV-2","CACTAGTATATTAATT",5,21.52,6,-4.76,1.84,3,1.14,0.01,">1 nonsynonymous","Y50Q V77P",2
"lib1","SARS-CoV-2","CACTAGTCGGATATAT",3,7.57,7.07,-3.69,0.27,1.5,1.09,0.02,"1 nonsynonymous","R179S",1
"lib1","SARS-CoV-2","CACTAGTCTGGCAAGT",1,44.37,10.58,-0.18,0.06,2.88,1.06,0,"1 nonsynonymous","E10M",1
"lib1","SARS-CoV-2","CACTAGTGGAACTCAT",7,2.7,NA,NA,NA,NA,NA,NA,"stop","S113* N118Q",2
"lib1","SARS-CoV-2","CACTAGTGGGAACTTG",1,8.39,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","L5V D98W R124V E141K",4
"lib1","SARS-CoV-2","CACTAGTTTTCGGGCG",3,4.45,NA,NA,NA,NA,NA,NA,"stop","W23T W106* L122Q",3
"lib1","SARS-CoV-2","CACTATAACGCCGCGT",1,9.98,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","I142Q Y175V",2
"lib1","SARS-CoV-2","CACTATAATCCGATTT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","V37* V173*",2
"lib1","SARS-CoV-2","CACTATAATCTTAAAT",4,241.72,10.01,-0.75,0.07,2.63,1.01,0,">1 nonsynonymous","C61A A105M",2
"lib1","SARS-CoV-2","CACTATAATGCATTCA",9,50.68,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5I G101D W106Y K132R",4
"lib1","SARS-CoV-2","CACTATAATTGAATCA",1,28.46,10.42,-0.34,0.07,2.92,1,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","CACTATACAAAGCCAA",4,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I F99Y P149R E154G L183A A190G",6
"lib1","SARS-CoV-2","CACTATACATACCCCT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","T85G Y119A Y175* S200V",4
"lib1","SARS-CoV-2","CACTATACTTACATAA",17,226.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K56V V180W",2
"lib1","SARS-CoV-2","CACTATAGAAAGCTAC",3,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L R124S L188P",3
"lib1","SARS-CoV-2","CACTATAGGCAGACAG",8,4.32,NA,NA,NA,NA,NA,NA,"stop","N40* D137* P161S",3
"lib1","SARS-CoV-2","CACTATAGTGAAACCT",3,21.92,10.4,-0.37,0.15,2.78,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CACTATAGTGTCAAAC",2,13.88,10.67,-0.1,0.07,2.85,1.05,0,">1 nonsynonymous","E76Q K94N",2
"lib1","SARS-CoV-2","CACTATATCGAACAAC",11,96.11,9.98,-0.78,0.06,2.7,1,0,">1 nonsynonymous","L60V A89V",2
"lib1","SARS-CoV-2","CACTATCAAAAATGTC",2,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C V103C G152D",3
"lib1","SARS-CoV-2","CACTATCAAACTAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","C31P Y39S K48S W106K S129F Y143G T148* G152P",8
"lib1","SARS-CoV-2","CACTATCACACGCGAG",11,113.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F47M F62D G86S L95F G101D",5
"lib1","SARS-CoV-2","CACTATCAGATTTTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87F F99L",2
"lib1","SARS-CoV-2","CACTATCCAACCATAC",2,25.34,10.18,-0.58,0.07,2.97,1.02,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","CACTATCCATACACCA",5,46.56,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","G155L P161F",2
"lib1","SARS-CoV-2","CACTATCCCTGTACCG",4,18.57,7.15,-3.61,0.43,1.64,1.13,0.07,">1 nonsynonymous","C6G F12N Y35P R124H K128R T148K",6
"lib1","SARS-CoV-2","CACTATCCCTTTTTAA",2,51.05,10.67,-0.09,0.05,2.88,1.03,0,">1 nonsynonymous","D59R D90M P197M",3
"lib1","SARS-CoV-2","CACTATGAAATTTCAC",1,36.12,7.91,-2.85,0.23,2.47,1.17,0.02,">1 nonsynonymous","V37D S129R N157Y K198W",4
"lib1","SARS-CoV-2","CACTATGAAATTTTCT",4,15.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I G101L E135N",3
"lib1","SARS-CoV-2","CACTATGACTTTAATA",3,13.79,10.55,-0.21,0.06,3,1.01,0,"1 nonsynonymous","D98W",1
"lib1","SARS-CoV-2","CACTATGCCTTAGCCT",13,6.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3H A33H C49T C61S W106A R136G P149L A192T",8
"lib1","SARS-CoV-2","CACTATGTTAGACGAC",3,70.76,10.71,-0.06,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTATTAAAACCTAT",5,31.15,10.8,0.03,0.06,2.92,1.05,0,"1 nonsynonymous","K128D",1
"lib1","SARS-CoV-2","CACTATTAACTGGTTG",5,50.81,9.81,-0.95,0.1,2.11,1.03,0,">1 nonsynonymous","G9M R25T",2
"lib1","SARS-CoV-2","CACTATTAGTAATCTA",1,9.07,6.02,-4.75,2,3,1.2,0.01,">1 nonsynonymous","V11K P96I N151T T201G",4
"lib1","SARS-CoV-2","CACTATTCAATGACTA",2,86.73,10.82,0.06,0.07,2.82,1.08,0,">1 nonsynonymous","L5E S147Y S164N K198A",4
"lib1","SARS-CoV-2","CACTATTTAATGGATT",3,23.9,9.98,-0.79,0.11,2.43,1,0.01,">1 nonsynonymous","G83V V115M",2
"lib1","SARS-CoV-2","CACTATTTTTTACCTT",10,2.41,NA,NA,NA,NA,NA,NA,"stop","S43V W106L P149T F167*",4
"lib1","SARS-CoV-2","CACTCAAAAGCAGGAT",2,12.09,6,-4.76,2,3,1.07,0,">1 nonsynonymous","P54G T100W I142F Y165E",4
"lib1","SARS-CoV-2","CACTCAAACACCGATT",8,113.7,7.23,-3.54,0.25,1.5,1.08,0.02,">1 nonsynonymous","G9W S41K F47Y Q84N Y119K",5
"lib1","SARS-CoV-2","CACTCAAAGAACAACT",4,18.12,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","G9Q K94D R179L",3
"lib1","SARS-CoV-2","CACTCAAAGTTTTAAG",2,39.01,10.53,-0.23,0.08,2.89,1.07,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","CACTCAAATAAAAATC",2,17.76,10.72,-0.04,0.08,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTCAAATAAGTACA",5,54.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47A I80E",2
"lib1","SARS-CoV-2","CACTCAAATTAAATAA",3,11.39,9.98,-0.79,0.16,2.62,1,0.02,">1 nonsynonymous","N13S S41A",2
"lib1","SARS-CoV-2","CACTCAACAAAATAAA",3,8.07,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","N4P S45D V65S D75Y Q84Y L95Y A105L G116R",8
"lib1","SARS-CoV-2","CACTCAACAGCTATTT",1,19.11,7.38,-3.38,0.27,1.5,1.11,0.02,">1 nonsynonymous","I80M D90Q N120Y S164R T170N",5
"lib1","SARS-CoV-2","CACTCAACGATTCCAA",2,13.41,10.16,-0.6,0.07,2.93,1.03,0,"1 nonsynonymous","G174F",1
"lib1","SARS-CoV-2","CACTCAAGCAAGAACA",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T63W N130P P149N",4
"lib1","SARS-CoV-2","CACTCAAGTATATCTG",6,163.52,10.8,0.03,0.06,2.89,1.06,0,">1 nonsynonymous","Y39K T201N",2
"lib1","SARS-CoV-2","CACTCAATAAACAGTA",3,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S R27I C49W D112N T201C",5
"lib1","SARS-CoV-2","CACTCAATCATATCAT",5,70.34,10.76,0,0.06,2.92,1.05,0,">1 nonsynonymous","K48E D98N",2
"lib1","SARS-CoV-2","CACTCAATCTGTATGC",6,125.06,10.71,-0.06,0.05,2.9,1.05,0,">1 nonsynonymous","T100R T201G",2
"lib1","SARS-CoV-2","CACTCAATGCAGTTTA",1,1.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71W",1
"lib1","SARS-CoV-2","CACTCAATGTCCAGGC",3,0,NA,NA,NA,NA,NA,NA,"stop","L60D D75*",2
"lib1","SARS-CoV-2","CACTCACAACACTCAA",3,49.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59I P96N N109Y G116K R127P",5
"lib1","SARS-CoV-2","CACTCACAACAGACCC",2,6.91,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","S41E K94P F134K Y143W C158S Y165K",6
"lib1","SARS-CoV-2","CACTCACAATATTTAT",1,8.25,10.28,-0.48,0.17,2.7,1,0.01,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","CACTCACAGCGCCAAT",1,59.67,10.31,-0.46,0.04,2.87,1,0,"1 nonsynonymous","A67T",1
"lib1","SARS-CoV-2","CACTCACCCATATTCA",3,0.88,NA,NA,NA,NA,NA,NA,"stop","I2G Q84* S147V",3
"lib1","SARS-CoV-2","CACTCACGGTCGGTAA",8,159.85,10,-0.76,0.06,2.88,1.03,0,">1 nonsynonymous","L111V I142S",2
"lib1","SARS-CoV-2","CACTCACGTAGTTAAA",4,36.9,10.63,-0.13,0.1,2.76,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTCACTAGAGAAAT",5,61.78,9.95,-0.81,0.13,1.83,1.1,0.01,">1 nonsynonymous","N1R G51Y",2
"lib1","SARS-CoV-2","CACTCACTGAACCAGA",3,11.06,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V71T I80L D90T T140A",4
"lib1","SARS-CoV-2","CACTCAGACGCTTTGA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","V11R G86R N107L G146*",4
"lib1","SARS-CoV-2","CACTCAGACTTTTTGT",5,26.79,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","I2R P82G D90A D98R",4
"lib1","SARS-CoV-2","CACTCAGATAATCCCG",2,7.64,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A18I S41W K56N D90V",4
"lib1","SARS-CoV-2","CACTCAGCGAACTCTT",4,62.5,9.91,-0.85,0.12,2.29,1.05,0.01,">1 nonsynonymous","P7T F44T L60R",3
"lib1","SARS-CoV-2","CACTCAGTAATGGCAC",5,97.54,8.49,-2.27,0.15,1.98,1.12,0.01,">1 nonsynonymous","D98F Y119G Q144H",3
"lib1","SARS-CoV-2","CACTCAGTTCTAATAT",6,80.43,7.11,-3.65,0.23,1.74,1.09,0.01,">1 nonsynonymous","A42P Y159D",2
"lib1","SARS-CoV-2","CACTCATATAACAGGT",4,81.24,10.76,-0.01,0.06,2.96,1,0,"1 nonsynonymous","V32A",1
"lib1","SARS-CoV-2","CACTCATCAGTAAAAG",1,13.06,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V37A I72S A81Q T85M D90L N118V",6
"lib1","SARS-CoV-2","CACTCATTAGTCCCAA",11,0.5,NA,NA,NA,NA,NA,NA,"stop","R16* T55R Y165Q",3
"lib1","SARS-CoV-2","CACTCATTCACCATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K W106R G166L P197L",4
"lib1","SARS-CoV-2","CACTCATTGTCGAACA",2,94.84,10.8,0.03,0.06,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTCCACAAAACCGA",3,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S N92Y",2
"lib1","SARS-CoV-2","CACTCCCATTAAAATA",1,3.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","CACTCCCGTCTTTTCA",13,8.97,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","CACTCCGAACAGTACA",2,96.17,8.41,-2.36,0.25,1.69,1.14,0.02,">1 nonsynonymous","S29G Q176V",2
"lib1","SARS-CoV-2","CACTCCGAACTGAAAT",1,8.11,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G86I S139T T201V",3
"lib1","SARS-CoV-2","CACTCCGAATTTATAT",1,5.11,9.52,-1.24,0.32,2.33,1,0.03,">1 nonsynonymous","Y91M G155Y",2
"lib1","SARS-CoV-2","CACTCCGCCCCTAACA",3,28.12,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A18L S36K D68W G86R F167L",5
"lib1","SARS-CoV-2","CACTCCGGTATGAACT",6,20.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P F44V D90Q C150Y S200H",5
"lib1","SARS-CoV-2","CACTCCGTAGTAAATG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L I104C L122M V173H H189S",5
"lib1","SARS-CoV-2","CACTCCGTCAATAACA",2,65.17,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4K T63W Y143P",3
"lib1","SARS-CoV-2","CACTCCTAAGCTTGTA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","Y50* L122S",2
"lib1","SARS-CoV-2","CACTCCTAGGAACCTA",5,5.05,10.51,-0.25,0.22,2.87,1,0.01,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","CACTCCTATATTCAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","L57S A81*",2
"lib1","SARS-CoV-2","CACTCCTCATGGTCCC",1,43.74,10.58,-0.18,0.07,2.87,1.08,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","CACTCCTCTATCAATC",4,97.33,7.65,-3.11,0.21,1.5,1.12,0.01,">1 nonsynonymous","A145L N157V",2
"lib1","SARS-CoV-2","CACTCCTCTCCATTTC",2,24.81,10.16,-0.61,0.2,2.3,1.12,0.02,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","CACTCCTGTCAGTATA",3,92.52,10.59,-0.17,0.06,2.83,1.03,0,">1 nonsynonymous","A81R D97L",2
"lib1","SARS-CoV-2","CACTCGAAATCTTAGC",5,3.36,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","CACTCGAAGCACTAAT",5,19.92,8.47,-2.3,0.33,1.5,1.02,0.07,">1 nonsynonymous","E10L L57V N109T D112H Y119L",5
"lib1","SARS-CoV-2","CACTCGAAGTCACAAT",3,14.02,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V77Q S113M Y119L N130H",4
"lib1","SARS-CoV-2","CACTCGAAGTTATAAT",1,12.28,10.46,-0.3,0.21,2.48,1.03,0.02,">1 nonsynonymous","T55C T140Q T201Y",3
"lib1","SARS-CoV-2","CACTCGAATCTTCCAA",2,33.06,9.52,-1.25,0.12,1.86,1.08,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","CACTCGAGATTATAAC",2,47.29,10.37,-0.39,0.06,2.8,1.02,0,"1 nonsynonymous","A67T",1
"lib1","SARS-CoV-2","CACTCGAGTGCTTGAT",1,10.79,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","K56L F99L A105L",3
"lib1","SARS-CoV-2","CACTCGATTAACGACA",2,15.6,6.79,-3.97,0.62,1.5,1.22,0.04,">1 nonsynonymous","P82E C102G",2
"lib1","SARS-CoV-2","CACTCGATTGCCCTAA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","F8L T15* V103Q S129* S139L",5
"lib1","SARS-CoV-2","CACTCGCAAAAAAAAG",3,0.47,NA,NA,NA,NA,NA,NA,"stop","R27K N58I D75* Y159*",4
"lib1","SARS-CoV-2","CACTCGCACGGTCGGT",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P L38Q T85W S108P",4
"lib1","SARS-CoV-2","CACTCGCCAACCCAAA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","N40K N110T Y119*",3
"lib1","SARS-CoV-2","CACTCGCCAGAGGTAT",4,39.31,10.81,0.04,0.1,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTCGCTAGAACAGA",5,83.12,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A22Q F47I K94W P149R",4
"lib1","SARS-CoV-2","CACTCGCTTAATTGCC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","CACTCGGTTGACTGAA",2,2.41,NA,NA,NA,NA,NA,NA,"stop","V65S S69* A81* Y165R",4
"lib1","SARS-CoV-2","CACTCGTGATAACTAC",6,105.26,10.71,-0.05,0.05,2.85,1.05,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","CACTCGTTCACGCGGC",1,25.46,10.31,-0.45,0.06,2.93,1.02,0,">1 nonsynonymous","N40D S184L",2
"lib1","SARS-CoV-2","CACTCTAAAAATCGCG",11,83.7,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A33K Y165K",2
"lib1","SARS-CoV-2","CACTCTACAAAGACTG",5,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85G K132H",2
"lib1","SARS-CoV-2","CACTCTAGCATGAGAT",2,41.45,10.31,-0.45,0.05,2.89,1.04,0,">1 nonsynonymous","K48L D97Y",2
"lib1","SARS-CoV-2","CACTCTATCAAGCGCA",2,26.41,8.01,-2.75,0.28,1.5,1.18,0.03,">1 nonsynonymous","A81S V115L P161T",3
"lib1","SARS-CoV-2","CACTCTATCAGTTATT",1,11.05,10.11,-0.65,0.09,2.95,1,0,">1 nonsynonymous","E10W Y39I",2
"lib1","SARS-CoV-2","CACTCTCAAAAACCTA",5,75.37,10.89,0.13,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTCTCAAGTTCTGC",10,99.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L57N F99L V115K S129V",4
"lib1","SARS-CoV-2","CACTCTCATATACAGA",9,55.63,6.39,-4.38,0.55,1.5,1.24,0.02,">1 nonsynonymous","A14W D68V K87V L95G L131P",5
"lib1","SARS-CoV-2","CACTCTCATATGTAGA",2,38.33,10.86,0.09,0.06,2.91,1.05,0,"1 nonsynonymous","V32R",1
"lib1","SARS-CoV-2","CACTCTCCAAGAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49* F126S T170I",3
"lib1","SARS-CoV-2","CACTCTCCTAATTCGC",1,39.99,6.75,-4.02,0.49,1.5,1.09,0.04,">1 nonsynonymous","Y35R Y119T S129H Q176W",4
"lib1","SARS-CoV-2","CACTCTCTTCAACGTT",3,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F P82Q N130R Y143I",4
"lib1","SARS-CoV-2","CACTCTCTTCCATAGG",1,16.27,9.12,-1.65,0.08,1.89,1.14,0,">1 nonsynonymous","V32I I80M G174R",3
"lib1","SARS-CoV-2","CACTCTGCAAATCTAC",6,0.27,NA,NA,NA,NA,NA,NA,"stop","N40C V77* A81P G86Y P96T D112I F160N",7
"lib1","SARS-CoV-2","CACTCTTAACACGTAC",2,38.48,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T148G P161H",2
"lib1","SARS-CoV-2","CACTCTTAATCCTGTA",1,4.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41K",1
"lib1","SARS-CoV-2","CACTCTTCACAGCACC",1,18.94,10.74,-0.02,0.14,2.91,1.1,0.01,"1 nonsynonymous","K198I",1
"lib1","SARS-CoV-2","CACTCTTGCCCCATAA",2,1.51,NA,NA,NA,NA,NA,NA,"stop","N120* F167M",2
"lib1","SARS-CoV-2","CACTCTTGTTTGTACA",1,35.74,10.22,-0.55,0.06,2.93,1,0,">1 nonsynonymous","P7C N109L",2
"lib1","SARS-CoV-2","CACTCTTTGCTCGGCA",1,38.64,8.01,-2.75,0.34,1.5,1,0.05,">1 nonsynonymous","S36Q N118P F156Y V181I",4
"lib1","SARS-CoV-2","CACTCTTTTACGCATT",1,77.58,10.73,-0.03,0.06,2.84,1.06,0,">1 nonsynonymous","S45Y F47L Q163V",3
"lib1","SARS-CoV-2","CACTGAAATTCTGTTA",1,7.49,9.97,-0.79,0.08,2.7,1.14,0,">1 nonsynonymous","L5P I28A K87I S139Q",4
"lib1","SARS-CoV-2","CACTGAACAATTGCAG",6,64.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M C49Y N64Y Y91D",4
"lib1","SARS-CoV-2","CACTGAACAGATGACC",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N G83F V103G T148G",4
"lib1","SARS-CoV-2","CACTGAACATATCGCA",9,150.61,10.76,0,0.07,2.92,1.05,0,"1 nonsynonymous","K128M",1
"lib1","SARS-CoV-2","CACTGAACTATCGGGA",3,92.99,6,-4.76,1.32,1.5,1.14,0.01,">1 nonsynonymous","F44N Y175Q T201M",3
"lib1","SARS-CoV-2","CACTGAAGGTAGTTTA",7,144.19,10.64,-0.12,0.03,2.92,1.05,0,">1 nonsynonymous","A42R N151T",2
"lib1","SARS-CoV-2","CACTGACAAACTAATA",1,19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V20E D98T T148Y",3
"lib1","SARS-CoV-2","CACTGACCTATTCCAG",7,76.12,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86S L95F K199W",3
"lib1","SARS-CoV-2","CACTGAGATGTACCCC",1,19.36,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","T3K Y35Q V77E A192M",4
"lib1","SARS-CoV-2","CACTGAGCACCTACAT",9,2.49,NA,NA,NA,NA,NA,NA,"stop","V37* K132M Y143D S200M",4
"lib1","SARS-CoV-2","CACTGAGCTTCTAATA",2,36.21,9.21,-1.56,0.09,2.75,1.16,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","CACTGATAAAAAGCCG",1,44.62,6,-4.76,1.37,1.5,1.17,0.02,">1 nonsynonymous","T3S C158V",2
"lib1","SARS-CoV-2","CACTGATACCCCGTCG",1,44.89,10.63,-0.14,0.05,2.92,1.04,0,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","CACTGATGAAAACGAT",16,121.88,6.73,-4.03,0.33,1.5,1.2,0.02,">1 nonsynonymous","N13S K48C K128P T170L",4
"lib1","SARS-CoV-2","CACTGATGACTGAATT",2,14.33,10.83,0.06,0.14,2.85,1.05,0.01,"1 nonsynonymous","N4D",1
"lib1","SARS-CoV-2","CACTGATGTAAAACAA",4,32.56,6,-4.76,2,1.5,1.3,0.03,"1 nonsynonymous","K94W",1
"lib1","SARS-CoV-2","CACTGATGTATGCTGC",3,28.88,10.52,-0.24,0.08,2.8,1.16,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","CACTGCAAAGTCGCAA",3,23.01,7.02,-3.74,0.22,2.18,1.08,0.01,">1 nonsynonymous","I2F C158H",2
"lib1","SARS-CoV-2","CACTGCAATCCTACCC",8,62.15,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","A89F I138P R179D",3
"lib1","SARS-CoV-2","CACTGCACAAAACCGA",4,58.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L131K Q176W",2
"lib1","SARS-CoV-2","CACTGCACATCAGGTT",2,38.85,8.55,-2.21,0.12,2.67,1.09,0.01,">1 nonsynonymous","C61I N118P V173C",3
"lib1","SARS-CoV-2","CACTGCACCTCACATC",4,14.9,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L5Q Y39S G51I V181R",4
"lib1","SARS-CoV-2","CACTGCCACCCATTTT",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A A81S C102F Y165P",4
"lib1","SARS-CoV-2","CACTGCGGCCCTAAAT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","I2T L95* F134C V173H A190D",5
"lib1","SARS-CoV-2","CACTGCGTTGCGGGTT",8,1.27,NA,NA,NA,NA,NA,NA,"stop","N4I V32H E76*",3
"lib1","SARS-CoV-2","CACTGCTAAACTATAA",6,118.87,10.28,-0.48,0.05,2.99,1,0,">1 nonsynonymous","C61N K87L",2
"lib1","SARS-CoV-2","CACTGCTCAAAAGAAC",5,157.52,10.31,-0.45,0.04,2.92,1.02,0,">1 nonsynonymous","L5Q E141K T148A T170S",4
"lib1","SARS-CoV-2","CACTGCTGGCCTTATC",4,1.66,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib1","SARS-CoV-2","CACTGCTGTCACCGAG",3,32.32,10.65,-0.11,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTGGAATTGAACTG",4,52.12,10.81,0.05,0.07,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTGGAGGAGGCGAT",7,42.72,7.58,-3.18,0.36,1.5,1.14,0.04,">1 nonsynonymous","A33K W106H",2
"lib1","SARS-CoV-2","CACTGGATGCAGTAAA",5,41.75,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C31S S43Q P54F F99Q",4
"lib1","SARS-CoV-2","CACTGGCGACGTATGC",4,66.81,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N120R P161I A192T",3
"lib1","SARS-CoV-2","CACTGGCGGGCGAACC",1,15.18,9.74,-1.02,0.08,1.72,1.1,0,">1 nonsynonymous","A18K F134L E141M Q163T",4
"lib1","SARS-CoV-2","CACTGGCGTGACCGAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","S29L I88* N171L K198A",4
"lib1","SARS-CoV-2","CACTGGCTAAATAATC",2,14.61,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A33R P82R N118S",3
"lib1","SARS-CoV-2","CACTGGGAAATATCAC",6,33.45,10.13,-0.64,0.3,1.5,1,0.04,">1 nonsynonymous","C49W R136S",2
"lib1","SARS-CoV-2","CACTGGGGAGAACGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* T148S T201I",3
"lib1","SARS-CoV-2","CACTGGGGCATTGAAC",5,114.8,10.44,-0.33,0.07,2.82,1.05,0,">1 nonsynonymous","F47W T85M",2
"lib1","SARS-CoV-2","CACTGGGTAGAGGTAA",1,18.56,9.45,-1.32,0.18,1.8,1.15,0.01,"1 nonsynonymous","W23T",1
"lib1","SARS-CoV-2","CACTGGGTCATGACAT",3,39.95,6,-4.76,2,1.5,1.35,0.02,">1 nonsynonymous","I28R L38R C49V A81P A89M",5
"lib1","SARS-CoV-2","CACTGGTTAAGAGAAA",1,21.02,10.23,-0.53,0.18,2.17,1,0.01,">1 nonsynonymous","L5E G9E W106L",3
"lib1","SARS-CoV-2","CACTGTAAAAAGCCTA",3,92.51,10.78,0.02,0.05,2.91,1.06,0,"1 nonsynonymous","N110H",1
"lib1","SARS-CoV-2","CACTGTACTTATGAAC",4,40.29,9.05,-1.71,0.23,1.5,1.08,0.03,">1 nonsynonymous","N4V T55V A105I",3
"lib1","SARS-CoV-2","CACTGTATAATAGAAC",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L R127S C158E",3
"lib1","SARS-CoV-2","CACTGTCCCATTAGGA",6,64.52,6,-4.76,1.33,2.27,1.08,0,">1 nonsynonymous","I2H E10W A33P Q84F N109D",5
"lib1","SARS-CoV-2","CACTGTCTATTCTTGA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R L95P Y175S V181S",4
"lib1","SARS-CoV-2","CACTGTGACCTGCAAA",2,78.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35C F134P F156V K198E",4
"lib1","SARS-CoV-2","CACTGTGATGACAAGG",6,41.96,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F62L G86L V103G",3
"lib1","SARS-CoV-2","CACTGTGGCGCACTGT",1,6.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L I88R L95H C102W S164K",5
"lib1","SARS-CoV-2","CACTGTGTATAGCGAG",1,12.16,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A14I L38R F62P D68R",4
"lib1","SARS-CoV-2","CACTGTTAACTGCTAT",9,49.83,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D68H K94E F167M",3
"lib1","SARS-CoV-2","CACTGTTACACTAATC",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* K48A G83I K87R D98Y",5
"lib1","SARS-CoV-2","CACTGTTATAGAAAGG",3,43.94,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A33R C61N P96N Y121S S129T T170N",6
"lib1","SARS-CoV-2","CACTGTTCTGATTAAA",2,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I D98T S113F N118H G174Y",5
"lib1","SARS-CoV-2","CACTGTTGAGTGCAAA",5,5.42,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","D34I F99R Q144R",3
"lib1","SARS-CoV-2","CACTGTTTATGCGCCA",5,105.18,10.66,-0.11,0.07,2.95,1.02,0,">1 nonsynonymous","P54K V77L E141S V194I",4
"lib1","SARS-CoV-2","CACTTAAAAAAGAATT",1,16.78,10.22,-0.54,0.12,2.74,1.13,0.01,"1 nonsynonymous","A145I",1
"lib1","SARS-CoV-2","CACTTAAAATGCCCGG",1,11.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F12L Q84P R136V",3
"lib1","SARS-CoV-2","CACTTAAACAATCTCA",1,11.23,10.69,-0.07,0.15,2.93,1.06,0.01,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","CACTTAAACCTTGCAG",2,8.5,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S43V I80G Q144H",3
"lib1","SARS-CoV-2","CACTTAAACTCACCTG",4,9.06,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D68V T100I Q144C",3
"lib1","SARS-CoV-2","CACTTAAATAACATCC",2,72.48,9.19,-1.58,0.08,2.86,1.15,0,"1 nonsynonymous","Y119D",1
"lib1","SARS-CoV-2","CACTTAACAATAAAGC",4,158.74,8.66,-2.11,0.15,2.18,1.13,0.01,">1 nonsynonymous","T85S Q176W",2
"lib1","SARS-CoV-2","CACTTAACTAATAAAC",4,146.86,9.93,-0.83,0.1,2.13,1.01,0,">1 nonsynonymous","G83D Y91N",2
"lib1","SARS-CoV-2","CACTTAACTGAACCGA",2,9.18,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","CACTTAAGCCAGGCAC",3,24.97,7.44,-3.33,0.28,1.5,1.17,0.03,">1 nonsynonymous","F12A D90Y",2
"lib1","SARS-CoV-2","CACTTAAGTCCATTGA",1,0.84,NA,NA,NA,NA,NA,NA,"stop","I28K T63N N110*",3
"lib1","SARS-CoV-2","CACTTAATATAGTACG",5,43.21,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L5W S43R D68L T85A F126P R127H T201E",7
"lib1","SARS-CoV-2","CACTTAATGGTTAAAC",2,15.54,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","P7F A14F Y50F I142M F156S",5
"lib1","SARS-CoV-2","CACTTAATTAAAGTAA",4,88.45,9.76,-1.01,0.08,2.32,1.05,0,">1 nonsynonymous","K94Q A145V",2
"lib1","SARS-CoV-2","CACTTACAAACCAGTA",1,48.9,10.71,-0.06,0.09,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTTACACTGCTTAT",2,76.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L38K P82Y T100Y P149R Y175K R179N",6
"lib1","SARS-CoV-2","CACTTACATAAAGAAG",2,3.91,NA,NA,NA,NA,NA,NA,"stop","S113V P149C P169* A190T",4
"lib1","SARS-CoV-2","CACTTACCAACCCCCC",11,125.7,9.41,-1.35,0.08,2.72,1.09,0,">1 nonsynonymous","V37L F47W N120T",3
"lib1","SARS-CoV-2","CACTTACCGGATAACA",2,20.42,8.72,-2.04,0.12,2.32,1.06,0.01,">1 nonsynonymous","N24C G117V",2
"lib1","SARS-CoV-2","CACTTACCTCGTAAAG",5,56.32,10.46,-0.31,0.06,2.84,1.11,0,">1 nonsynonymous","K114M T140M N151L",3
"lib1","SARS-CoV-2","CACTTACGTTAGAACT",4,68.78,9.94,-0.83,0.05,2.97,1.01,0,">1 nonsynonymous","A33W G166V",2
"lib1","SARS-CoV-2","CACTTACGTTGAACTA",5,72.74,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S45A P82S Q144L",3
"lib1","SARS-CoV-2","CACTTACTCATAGACT",4,0.79,NA,NA,NA,NA,NA,NA,"stop","V37G K56S T63* Y93C",4
"lib1","SARS-CoV-2","CACTTAGACTATCATT",2,57.16,10.84,0.08,0.07,2.87,1.09,0,">1 nonsynonymous","T3H P197T",2
"lib1","SARS-CoV-2","CACTTAGCAATGGGCG",3,8.56,9.95,-0.82,0.17,2.09,1.09,0.01,"1 nonsynonymous","R127N",1
"lib1","SARS-CoV-2","CACTTAGTCCACAGCC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y S113G",2
"lib1","SARS-CoV-2","CACTTATATACCCGCG",3,41.88,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G83R A89H D97P S113Q N171K",5
"lib1","SARS-CoV-2","CACTTATATGGCTAAT",2,46.38,10.16,-0.6,0.04,2.87,1.03,0,">1 nonsynonymous","A42S Y123R A190L",3
"lib1","SARS-CoV-2","CACTTATGACTGCTCG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","N64L T100*",2
"lib1","SARS-CoV-2","CACTTATGAGGTTATA",3,8.47,9.89,-0.87,0.16,1.92,1.1,0.01,">1 nonsynonymous","N13S Q84Y",2
"lib1","SARS-CoV-2","CACTTATGATGTCATG",5,72.7,10.01,-0.75,0.1,2.39,1.04,0,">1 nonsynonymous","C6S T85M",2
"lib1","SARS-CoV-2","CACTTATTAGATGATT",5,102.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K48F Y175I",2
"lib1","SARS-CoV-2","CACTTATTAGTCCACG",1,30.73,8.39,-2.37,0.27,1.5,1.06,0.03,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","CACTTCACACTTCGAC",2,17.25,6.41,-4.35,0.58,1.5,1.16,0.01,">1 nonsynonymous","N4T S41G T100S G116L P161F",5
"lib1","SARS-CoV-2","CACTTCATCAGATAAT",5,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48C L131G K199M",3
"lib1","SARS-CoV-2","CACTTCCAATGAATCC",2,35.79,10.64,-0.13,0.04,2.93,1.01,0,">1 nonsynonymous","K48R K56N L122V E141M",4
"lib1","SARS-CoV-2","CACTTCCAGGGATTTA",2,17.22,8.41,-2.36,0.3,1.5,1.09,0.05,">1 nonsynonymous","S41Y C150R",2
"lib1","SARS-CoV-2","CACTTCCCAACAAGTA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","N1C A42* G86W G166R F185A",5
"lib1","SARS-CoV-2","CACTTCCTATAGAGAG",3,9.13,NA,NA,NA,NA,NA,NA,"stop","L5I R16* Y119R Y143R F160S S200*",6
"lib1","SARS-CoV-2","CACTTCCTTAATGAAC",2,35.98,10.7,-0.07,0.06,2.88,1.09,0,">1 nonsynonymous","C61K G83N",2
"lib1","SARS-CoV-2","CACTTCGAAAACCCAA",2,19.86,6.44,-4.33,0.73,1.5,1.22,0.04,">1 nonsynonymous","A14Y L95R T100P R136C",4
"lib1","SARS-CoV-2","CACTTCGAAAATCAAT",4,101.85,10.72,-0.04,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTTCGAATTCGAGG",4,75.96,9.6,-1.16,0.06,2.79,1.09,0,">1 nonsynonymous","P7L K114G",2
"lib1","SARS-CoV-2","CACTTCGACAATACGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N58Y N120S E141* T148L",4
"lib1","SARS-CoV-2","CACTTCGTCACGAAAG",4,60.73,9.02,-1.75,0.07,2.82,1.07,0,">1 nonsynonymous","G9R G166H",2
"lib1","SARS-CoV-2","CACTTCGTTTAGTTAG",5,41.49,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G117S G152C P177N",3
"lib1","SARS-CoV-2","CACTTCTACAACCTTC",4,61.81,8.29,-2.48,0.11,2.34,1.12,0.01,">1 nonsynonymous","I28L S129R I138Q F167W H189N",5
"lib1","SARS-CoV-2","CACTTCTGAGCTCCAA",6,83.63,10.03,-0.73,0.11,2.33,1.03,0,">1 nonsynonymous","S45A F167Y",2
"lib1","SARS-CoV-2","CACTTGAAAGCGATCC",2,14.18,10.19,-0.58,0.14,2.74,1,0.01,">1 nonsynonymous","N120R R127S",2
"lib1","SARS-CoV-2","CACTTGAACTCCCATG",2,25.95,9.64,-1.12,0.11,2.8,1.03,0.01,">1 nonsynonymous","C6F N64T T170S",3
"lib1","SARS-CoV-2","CACTTGAATCAGGGGT",2,28.41,10.7,-0.07,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CACTTGACCTAAAACC",6,76.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L60K G83Y D112K T148K G166D P169N",6
"lib1","SARS-CoV-2","CACTTGATCATTATTT",2,17.11,8.32,-2.45,0.17,1.97,1.11,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","CACTTGCAACGGCTAT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","N13R S69R G172*",3
"lib1","SARS-CoV-2","CACTTGCATGCAATCA",3,52.01,10.73,-0.04,0.08,2.86,1,0,">1 nonsynonymous","T85E A105S",2
"lib1","SARS-CoV-2","CACTTGCCTGCGACGT",3,1.22,NA,NA,NA,NA,NA,NA,"stop","D90T A192*",2
"lib1","SARS-CoV-2","CACTTGCTCCCGGTTA",1,0.88,NA,NA,NA,NA,NA,NA,"stop","S41H C49S Y66* F99Y",4
"lib1","SARS-CoV-2","CACTTGGAACTAAGTG",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G P54Q A105N E135Y",4
"lib1","SARS-CoV-2","CACTTGGCGAATTATG",2,28.67,8.5,-2.27,0.16,3,1.01,0.01,">1 nonsynonymous","N64H Y119N G146T",3
"lib1","SARS-CoV-2","CACTTGGTGCAACTTG",2,57.48,10.31,-0.45,0.11,2.65,1.08,0,">1 nonsynonymous","L5Q F12L S41F P149E",4
"lib1","SARS-CoV-2","CACTTGGTTGGGTCAA",5,13.81,10.73,-0.03,0.12,2.8,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CACTTGTATTGTCCTA",10,5.75,NA,NA,NA,NA,NA,NA,"stop","S69* G116E G166K",3
"lib1","SARS-CoV-2","CACTTGTCTGTAAACT",8,261.53,10.12,-0.64,0.04,2.93,1.01,0,">1 nonsynonymous","L111I Q176H",2
"lib1","SARS-CoV-2","CACTTGTTAGAAATTG",1,37.37,9.52,-1.24,0.16,2.3,1.14,0.01,">1 nonsynonymous","L5P Y91T S129V",3
"lib1","SARS-CoV-2","CACTTGTTGTGTGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* Y35W G74Y Y93A L111K K114N E135R",7
"lib1","SARS-CoV-2","CACTTTACTATACCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib1","SARS-CoV-2","CACTTTACTTCAACTT",1,72.5,9.28,-1.49,0.08,2.85,1.1,0,">1 nonsynonymous","G9D G117D",2
"lib1","SARS-CoV-2","CACTTTAGACTTGGCT",1,15.15,10.23,-0.54,0.15,2.35,1,0.01,">1 nonsynonymous","L5P A81T K128F",3
"lib1","SARS-CoV-2","CACTTTAGAGAACCCC",3,30.47,8.55,-2.21,0.24,2.07,1.1,0.02,">1 nonsynonymous","L5T N107A Y143L",3
"lib1","SARS-CoV-2","CACTTTATATACCTTA",2,16.07,9.55,-1.22,0.26,1.78,1.21,0.03,">1 nonsynonymous","Q79H K128W",2
"lib1","SARS-CoV-2","CACTTTATGAAGTTTT",4,53.28,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D68A D75N F160S",3
"lib1","SARS-CoV-2","CACTTTATTCCTAGGG",1,3.49,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","CACTTTCAAGTTATCA",2,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105P P133V G174R K198L",4
"lib1","SARS-CoV-2","CACTTTCACACACCGT",3,17.25,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y93K T100Y",2
"lib1","SARS-CoV-2","CACTTTCACCCCCTAT",13,135.06,10.71,-0.06,0.07,2.87,1.08,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","CACTTTCAGCACGGTC",2,0,NA,NA,NA,NA,NA,NA,"stop","V37L Y119V C158*",3
"lib1","SARS-CoV-2","CACTTTCATATGTTCG",2,29.13,6,-4.76,2,3,1.18,0.01,"1 nonsynonymous","N92K",1
"lib1","SARS-CoV-2","CACTTTCATTACTCGC",2,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V A42S S69R R124I",4
"lib1","SARS-CoV-2","CACTTTCCAAAGATCC",1,8.61,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","F70S P82Y P149F F167S",4
"lib1","SARS-CoV-2","CACTTTCCCAATGTAG",1,5.2,6.8,-3.96,0.6,1.5,1,0.08,">1 nonsynonymous","F12G A89L F99C L162R",4
"lib1","SARS-CoV-2","CACTTTCCCGTAACTG",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K D59L V77T G116D I142Q",5
"lib1","SARS-CoV-2","CACTTTCGGCCAGCAT",4,81.6,7.11,-3.66,0.1,2.02,1.11,0,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","CACTTTCGGCCGCATA",2,42.33,8.06,-2.7,0.24,1.5,1.11,0.02,">1 nonsynonymous","S43R L131G",2
"lib1","SARS-CoV-2","CACTTTCTTCAAAGAT",2,45.11,10.65,-0.12,0.04,2.93,1.02,0,"1 nonsynonymous","A81Q",1
"lib1","SARS-CoV-2","CACTTTGATAATGCTA",5,1.26,NA,NA,NA,NA,NA,NA,"stop","F8* S41R Y50V G166C V173Q",5
"lib1","SARS-CoV-2","CACTTTGCTAAGTCCC",8,108.25,10.17,-0.59,0.06,2.73,1,0,">1 nonsynonymous","N4K Y93F",2
"lib1","SARS-CoV-2","CACTTTGCTGAGTTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60W W106Y Y119W R127A",4
"lib1","SARS-CoV-2","CACTTTGTACACGGAA",4,0.33,NA,NA,NA,NA,NA,NA,"stop","N4D P96H Y159*",3
"lib1","SARS-CoV-2","CACTTTGTCAACGATT",5,101.74,10.36,-0.41,0.03,2.88,1.03,0,">1 nonsynonymous","D59Q I104T",2
"lib1","SARS-CoV-2","CACTTTTACGAACAAG",9,68.32,6,-4.76,2,3,1.26,0.01,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","CACTTTTAGTCACGAG",2,19.28,6.77,-4,0.42,1.5,1.05,0.03,"1 nonsynonymous","F167N",1
"lib1","SARS-CoV-2","CACTTTTATTGGATGA",3,34.33,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y21F T85W N151Y G152C V173Y",5
"lib1","SARS-CoV-2","CACTTTTCCATGCCAG",1,14.67,10.65,-0.12,0.06,2.93,1.05,0,">1 nonsynonymous","N4K S45D",2
"lib1","SARS-CoV-2","CACTTTTGGACTGGTT",4,7.64,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","T3D K48Y G86W",3
"lib1","SARS-CoV-2","CACTTTTGGGTGTCTT",9,40.36,8.51,-2.26,0.2,1.63,1.19,0.02,">1 nonsynonymous","P133L E141W",2
"lib1","SARS-CoV-2","CACTTTTTGATAGTCT",2,29.82,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N30S V65E L95R W106V Q168C",5
"lib1","SARS-CoV-2","CACTTTTTTAGGAATC",3,51.98,10.91,0.15,0.09,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAAAAAATGCTAG",1,22.09,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G86V E141M T170S",3
"lib1","SARS-CoV-2","CAGAAAAAATTAGAAA",7,44.38,9.17,-1.6,0.14,2.08,1.05,0.01,">1 nonsynonymous","S41L D90W S139D T170S A190E",5
"lib1","SARS-CoV-2","CAGAAAAAGCACTTGT",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y165P",2
"lib1","SARS-CoV-2","CAGAAAAAGTGGTGAA",7,5.03,NA,NA,NA,NA,NA,NA,"stop","A33V Y35* Y93I",3
"lib1","SARS-CoV-2","CAGAAAAATCAATGCT",3,98.5,9.95,-0.81,0.09,2.14,1.05,0,">1 nonsynonymous","I2R L38Y S45K Q168R",4
"lib1","SARS-CoV-2","CAGAAAACAAGCAGAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","CAGAAAACAATAGTTG",1,24.09,10.47,-0.29,0.26,2.58,1.03,0.03,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAAACAATCAACA",1,13.65,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R78N N107F R124H V173A",4
"lib1","SARS-CoV-2","CAGAAAACAATTTACT",2,0.25,NA,NA,NA,NA,NA,NA,"stop","F99C V103T N118V F134N G174*",5
"lib1","SARS-CoV-2","CAGAAAACCACTCCTG",4,12.2,6.46,-4.3,0.72,1.5,1.19,0.05,">1 nonsynonymous","G86R K198M",2
"lib1","SARS-CoV-2","CAGAAAACGAGCAAAA",1,13.73,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E10I C49V T100L T201S",4
"lib1","SARS-CoV-2","CAGAAAAGACATAAAA",3,9.79,6.57,-4.2,0.57,1.5,1.37,0.03,">1 nonsynonymous","G86S K114V P149H",3
"lib1","SARS-CoV-2","CAGAAAAGACTGATTT",2,10.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15R D68T W106D S129L R136N F167H",6
"lib1","SARS-CoV-2","CAGAAAAGTGGCTCAC",4,14.85,6,-4.76,2,1.5,1.08,0.01,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","CAGAAAAGTGTTGTAA",2,50.65,6.07,-4.69,0.93,1.5,1.2,0.02,">1 nonsynonymous","D59R F70Y D98E",3
"lib1","SARS-CoV-2","CAGAAAATACCCGTAT",4,14.42,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6K I72W D90Y",3
"lib1","SARS-CoV-2","CAGAAAATAGATACAC",2,34.47,10.17,-0.6,0.02,2.92,1.04,0,">1 nonsynonymous","K87W T140R Y175F",3
"lib1","SARS-CoV-2","CAGAAAATATCAACTA",1,5.81,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V181S",1
"lib1","SARS-CoV-2","CAGAAACAAACACAAA",1,10.3,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29K T55M Y121N S139H",4
"lib1","SARS-CoV-2","CAGAAACAACTTGCGT",4,117.73,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E10T R25L S41D F167H",4
"lib1","SARS-CoV-2","CAGAAACACACAATAA",1,37.95,9.12,-1.65,0.29,1.66,1.13,0.03,">1 nonsynonymous","I2Q G86M N130R A192P",4
"lib1","SARS-CoV-2","CAGAAACACACACCAG",8,94.2,8.81,-1.96,0.21,1.5,1.05,0.02,">1 nonsynonymous","R27M E135I Y178N",3
"lib1","SARS-CoV-2","CAGAAACACCCTTGAG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y F47R D90T N151Y S200L",5
"lib1","SARS-CoV-2","CAGAAACACGAAGGAG",7,59.03,9.79,-0.97,0.12,2.23,1.04,0.01,">1 nonsynonymous","F8S R78A T201P",3
"lib1","SARS-CoV-2","CAGAAACACGAGTGTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V V181A",2
"lib1","SARS-CoV-2","CAGAAACAGCCACGAT",1,25.21,10.45,-0.32,0.05,2.93,1.02,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CAGAAACATGTCAATA",2,22.96,10.36,-0.41,0.07,2.89,1.08,0,">1 nonsynonymous","G116L A190H",2
"lib1","SARS-CoV-2","CAGAAACATTATTAGC",7,52.49,6,-4.76,1.22,1.5,1.22,0.02,">1 nonsynonymous","A81L Q176P",2
"lib1","SARS-CoV-2","CAGAAACATTTTAGGC",4,35.31,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","A81D A145I C150S",3
"lib1","SARS-CoV-2","CAGAAACCCCAGAGAT",14,237.04,10.74,-0.02,0.04,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAACCCGTTGTAA",7,161.79,10.7,-0.06,0.06,2.88,1.07,0,">1 nonsynonymous","T148L F160N",2
"lib1","SARS-CoV-2","CAGAAACCTAAGAATC",1,9.02,10.47,-0.29,0.15,2.8,1.17,0.01,">1 nonsynonymous","A18P C61F T140V",3
"lib1","SARS-CoV-2","CAGAAACCTGGTGCTT",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72N P169F",2
"lib1","SARS-CoV-2","CAGAAACGAATTAAAC",4,3.28,NA,NA,NA,NA,NA,NA,"stop","V37M D97* G116* L183P P197R",5
"lib1","SARS-CoV-2","CAGAAACGCACCTTAC",1,9.31,6,-4.76,2,3,1.02,0,">1 nonsynonymous","A105E L131R",2
"lib1","SARS-CoV-2","CAGAAACGTATTCATT",5,55.03,6,-4.76,1.27,1.5,1.18,0.02,">1 nonsynonymous","A105I Y143E Q168L",3
"lib1","SARS-CoV-2","CAGAAACTAACAGATT",7,61.54,10.62,-0.14,0.06,2.86,1.09,0,">1 nonsynonymous","F8L D98P",2
"lib1","SARS-CoV-2","CAGAAACTAAGTACTA",3,40.8,10.81,0.05,0.05,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAACTGAAATAAA",3,11.87,8.52,-2.25,0.28,1.56,1.22,0.04,">1 nonsynonymous","A81N W106F",2
"lib1","SARS-CoV-2","CAGAAACTGAAATTTC",2,1.94,NA,NA,NA,NA,NA,NA,"stop","N1H Y165*",2
"lib1","SARS-CoV-2","CAGAAACTGACGGTCA",2,70.39,10.43,-0.33,0.07,2.85,1.02,0,">1 nonsynonymous","N4T Y178S",2
"lib1","SARS-CoV-2","CAGAAAGCTCTCACCT",1,8.82,6,-4.76,2,1.5,1.02,0.01,">1 nonsynonymous","P149Y F167V",2
"lib1","SARS-CoV-2","CAGAAAGCTGAAGAGA",1,22.65,7.19,-3.57,0.26,1.5,1.14,0.02,">1 nonsynonymous","N92S Y123S C195V",3
"lib1","SARS-CoV-2","CAGAAAGGTCGGACCT",1,7.51,9.47,-1.3,0.34,1.5,1.22,0.05,">1 nonsynonymous","S69V P191T",2
"lib1","SARS-CoV-2","CAGAAAGTCTTGCTTT",2,12.19,6.41,-4.35,0.1,1.6,1.02,0,">1 nonsynonymous","R179M K199M",2
"lib1","SARS-CoV-2","CAGAAAGTGACAATAG",3,43.24,10.07,-0.7,0.09,2.68,1.11,0,">1 nonsynonymous","C6S N120K",2
"lib1","SARS-CoV-2","CAGAAAGTGGTGTTAG",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D D97G E154L",3
"lib1","SARS-CoV-2","CAGAAATAAAATAAAA",1,66.7,10.69,-0.08,0.06,2.91,1.07,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","CAGAAATAAGTCACAA",2,62.97,10.64,-0.13,0.07,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAATACAATTAAG",4,9.42,6.74,-4.03,0.74,1.5,1.16,0.08,">1 nonsynonymous","C49R D112S Y119V I142R",4
"lib1","SARS-CoV-2","CAGAAATACGCCGCGT",3,26.27,6,-4.76,2,2.48,1.2,0.05,">1 nonsynonymous","R127Y R136T",2
"lib1","SARS-CoV-2","CAGAAATAGGACCCAG",2,34.28,9.99,-0.78,0.14,2.11,1,0.01,">1 nonsynonymous","L5M F44M L60F P149F",4
"lib1","SARS-CoV-2","CAGAAATCGCAACCTT",2,44.38,10.71,-0.05,0.07,2.82,1.11,0,"1 nonsynonymous","C195D",1
"lib1","SARS-CoV-2","CAGAAATGCACAAAGG",3,41.25,8.09,-2.67,0.12,2.07,1.09,0.01,">1 nonsynonymous","N4S P54F N120C G166E",4
"lib1","SARS-CoV-2","CAGAAATGCCTTACAT",7,1.53,NA,NA,NA,NA,NA,NA,"stop","C31W S41* G86Y",3
"lib1","SARS-CoV-2","CAGAAATGGCTGGCAC",6,2.87,NA,NA,NA,NA,NA,NA,"stop","A22L I104E D137* P177N",4
"lib1","SARS-CoV-2","CAGAAATGGTAGACCT",2,15.66,10.66,-0.11,0.09,2.79,1.16,0,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","CAGAAATTATATGTTA",3,26.15,10.81,0.05,0.07,2.95,1.03,0,"1 nonsynonymous","V37K",1
"lib1","SARS-CoV-2","CAGAAATTATGGTCCC",6,65.32,10.7,-0.06,0.04,2.99,1,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","CAGAAATTGTACATTT",3,13.36,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","N13I C61G N92T F160I",4
"lib1","SARS-CoV-2","CAGAACAAACATTACG",8,54.37,9.78,-0.98,0.1,2.22,1.04,0.01,">1 nonsynonymous","Q84F N110D E141N P149F",4
"lib1","SARS-CoV-2","CAGAACAACGCGCCAT",16,58.76,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F47N N107R Y123L V182Q",4
"lib1","SARS-CoV-2","CAGAACAACTGCTCGC",1,15.11,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F47I P54T I142A P161L",4
"lib1","SARS-CoV-2","CAGAACAACTTTGGTA",5,2.9,NA,NA,NA,NA,NA,NA,"stop","G86Y F167*",2
"lib1","SARS-CoV-2","CAGAACAAGTTTACGC",1,55.09,9.65,-1.11,0.13,2.04,1.12,0.01,">1 nonsynonymous","T3I C61T Q84T S113A E135S",5
"lib1","SARS-CoV-2","CAGAACACACGAGTCC",8,284.98,10.16,-0.6,0.06,2.79,1,0,">1 nonsynonymous","Y50H G152N",2
"lib1","SARS-CoV-2","CAGAACACCATAAGAT",7,1.6,NA,NA,NA,NA,NA,NA,"stop","C6* A14S A145P",3
"lib1","SARS-CoV-2","CAGAACACCCCAAACC",3,43.95,6,-4.76,0.9,3,1.11,0,">1 nonsynonymous","S19F T63L F126K T140R Q176Y",5
"lib1","SARS-CoV-2","CAGAACACGAAAGCCT",12,142.12,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41V E141P P177M T201W",4
"lib1","SARS-CoV-2","CAGAACAGCCAGCCCC",2,15.03,10.29,-0.48,0.08,2.83,1,0,">1 nonsynonymous","A14I T55N L60V",3
"lib1","SARS-CoV-2","CAGAACAGTAATCTTT",4,140.69,6,-4.76,1.42,1.5,1.12,0.01,"1 nonsynonymous","Y143P",1
"lib1","SARS-CoV-2","CAGAACAGTGAGAGTG",9,122.41,10.76,0,0.05,2.9,1.04,0,">1 nonsynonymous","T55D N64P",2
"lib1","SARS-CoV-2","CAGAACATGCTTGTGG",6,72.27,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9P N118S I138E C150I T170D",5
"lib1","SARS-CoV-2","CAGAACCACCAAAAAA",1,1.79,NA,NA,NA,NA,NA,NA,"stop","F44* G51C P82T G155L F167N",5
"lib1","SARS-CoV-2","CAGAACCATTTTATAC",2,1.43,NA,NA,NA,NA,NA,NA,"stop","S29G R73A D98* P149G",4
"lib1","SARS-CoV-2","CAGAACCCCTGCGATA",1,5.74,10.46,-0.31,0.02,3,1,0,"1 nonsynonymous","A22L",1
"lib1","SARS-CoV-2","CAGAACCCGAATATTA",2,38.1,10.49,-0.27,0.07,2.92,1.07,0,">1 nonsynonymous","A18S Y39N",2
"lib1","SARS-CoV-2","CAGAACCGAAGTTATG",2,22.16,10.73,-0.03,0.11,2.93,1.07,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","CAGAACCGTGGGCAGT",1,45.89,9.89,-0.88,0.16,2.03,1.02,0.01,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","CAGAACCTCAACATAA",2,44.41,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","G146V G172Y",2
"lib1","SARS-CoV-2","CAGAACCTCTAAAAAA",14,85.02,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G86P",1
"lib1","SARS-CoV-2","CAGAACCTGCAAGGAC",10,110.56,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K26W F167A R179S",3
"lib1","SARS-CoV-2","CAGAACCTGCACAGAT",4,39.74,10.79,0.03,0.1,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAACGACCCCTAAC",3,136.61,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y50P I88L",2
"lib1","SARS-CoV-2","CAGAACGACCCTTACC",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116M I142L",2
"lib1","SARS-CoV-2","CAGAACGAGTATTGTT",2,23.64,8.32,-2.45,0.12,1.68,1.07,0.01,">1 nonsynonymous","T170M V182S H189N",3
"lib1","SARS-CoV-2","CAGAACGCCAGCCTCG",5,29.35,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","F44Y C49T C158P",3
"lib1","SARS-CoV-2","CAGAACGCTCAACTAG",2,24.72,9.73,-1.03,0.07,2.89,1,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","CAGAACGGAGCCTTAA",9,100.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F44N D68K G83I A89W N107L",5
"lib1","SARS-CoV-2","CAGAACGTATTAATGG",2,6.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56N Q79A W106S",3
"lib1","SARS-CoV-2","CAGAACGTGGAAATTT",2,13.51,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V11I D68M K87C G116C N130L",5
"lib1","SARS-CoV-2","CAGAACTATTAGTACT",2,51.75,10.88,0.12,0.13,2.77,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAGAACTCCATATTAA",6,0.21,NA,NA,NA,NA,NA,NA,"stop","N110C G116*",2
"lib1","SARS-CoV-2","CAGAACTCGTTCAAAA",3,40.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36L Y50C S129G G174R",4
"lib1","SARS-CoV-2","CAGAACTGACGGAGTG",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L W106C",2
"lib1","SARS-CoV-2","CAGAACTGGTGAGAAC",5,2.46,NA,NA,NA,NA,NA,NA,"stop","K56* N107L P149T E154I",4
"lib1","SARS-CoV-2","CAGAACTTGCACTCCG",1,12.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3C C49N",2
"lib1","SARS-CoV-2","CAGAACTTGTACGAAC",5,51.57,10.71,-0.06,0.1,2.9,1.04,0,"1 nonsynonymous","A22N",1
"lib1","SARS-CoV-2","CAGAACTTGTAGGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4F V37Y G101N N107L G146* G152F",6
"lib1","SARS-CoV-2","CAGAAGAAAACGTAAC",2,22.12,6.1,-4.67,0.97,1.5,1.21,0.03,">1 nonsynonymous","I28T C49H G146I S200Y",4
"lib1","SARS-CoV-2","CAGAAGAAAGGCATGT",4,1.47,NA,NA,NA,NA,NA,NA,"stop","T15G P82* L162A",3
"lib1","SARS-CoV-2","CAGAAGACAATGCTTA",10,45.85,10.42,-0.35,0.05,2.89,1.05,0,"1 nonsynonymous","G155N",1
"lib1","SARS-CoV-2","CAGAAGAGAAGTACAA",4,24.98,7.43,-3.34,0.4,1.56,1.13,0.06,">1 nonsynonymous","A18R V65W P96V K128S R136Y P197A",6
"lib1","SARS-CoV-2","CAGAAGAGACAATTAT",1,17.28,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y35W A89Q E141V Y159G",4
"lib1","SARS-CoV-2","CAGAAGCAGACGGCAC",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W C49F T85P A105G L183N",5
"lib1","SARS-CoV-2","CAGAAGCCCAGACTCT",2,73.67,8.32,-2.44,0.12,2.25,1.1,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","CAGAAGCCTCAACAAA",1,25.14,9.88,-0.89,0.09,2.66,1.03,0,">1 nonsynonymous","F62Q N107P",2
"lib1","SARS-CoV-2","CAGAAGCTGAGGTCAC",3,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R C102R P149L",3
"lib1","SARS-CoV-2","CAGAAGCTGCACCCAG",2,40.83,10.6,-0.17,0.08,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAAGGAAGCCATTG",2,15.93,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","V71R Q84V D90Y Q176R V182I",5
"lib1","SARS-CoV-2","CAGAAGGATTTAACTA",5,73.93,8.13,-2.63,0.31,1.5,1.13,0.03,">1 nonsynonymous","R25A Y39S",2
"lib1","SARS-CoV-2","CAGAAGGCCCCCCTAA",4,7.97,6,-4.76,2,1.5,1.04,0,"1 nonsynonymous","I72G",1
"lib1","SARS-CoV-2","CAGAAGTATCCGCAAG",2,70.58,6,-4.76,2,1.5,1.23,0.01,"1 nonsynonymous","G172M",1
"lib1","SARS-CoV-2","CAGAAGTATTCTAAGT",3,36.42,9.95,-0.81,0.1,1.99,1.04,0,">1 nonsynonymous","I28L S29N D68H",3
"lib1","SARS-CoV-2","CAGAAGTCCGGCTAAA",2,16.98,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49M I88K L95S P161T",4
"lib1","SARS-CoV-2","CAGAAGTGACTGATCT",5,21.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I88L K94W",2
"lib1","SARS-CoV-2","CAGAAGTGGATGCGTT",4,49.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S36P G51W N107K E141G",4
"lib1","SARS-CoV-2","CAGAAGTTATTCATCC",2,12.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Q V103W N110H",3
"lib1","SARS-CoV-2","CAGAATAAAAAGGGGT",6,37.94,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V20E Y91K A145I T201D",4
"lib1","SARS-CoV-2","CAGAATAAACACTTAC",6,67.99,6,-4.76,1.68,1.5,1.17,0.01,">1 nonsynonymous","I88Y T148K",2
"lib1","SARS-CoV-2","CAGAATAAAGCTTCAT",3,9.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3M W23L C49S K56Y N107Y",5
"lib1","SARS-CoV-2","CAGAATAACATACCAG",4,128.58,8.72,-2.04,0.11,2.05,1.11,0,"1 nonsynonymous","R73V",1
"lib1","SARS-CoV-2","CAGAATAACGCATTAT",2,136.84,10.75,-0.01,0.05,2.86,1.04,0,"1 nonsynonymous","T193P",1
"lib1","SARS-CoV-2","CAGAATAAGTAACACA",1,29.45,10.39,-0.38,0.1,2.85,1,0.01,">1 nonsynonymous","L5R A18T T55K",3
"lib1","SARS-CoV-2","CAGAATAATATTCTCA",6,77.87,7.77,-2.99,0.16,1.5,1.11,0.01,">1 nonsynonymous","D98V N157T S184G",3
"lib1","SARS-CoV-2","CAGAATACAAAGCTAT",2,25.2,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","F44R K56L D68M",3
"lib1","SARS-CoV-2","CAGAATACAAATCTAG",2,68.95,9.85,-0.92,0.1,1.98,1.06,0.01,">1 nonsynonymous","R136G S200P",2
"lib1","SARS-CoV-2","CAGAATACGCCATTAG",1,22.39,7.02,-3.74,0.44,1.5,1.31,0.04,">1 nonsynonymous","R16Y P96M N120G",3
"lib1","SARS-CoV-2","CAGAATAGAACCATCT",2,34.63,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","V182M",1
"lib1","SARS-CoV-2","CAGAATAGAAGATTAC",10,77.75,10.66,-0.1,0.1,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAATAGTCATGTTG",1,39.12,7.04,-3.72,0.52,1.83,1.24,0.06,">1 nonsynonymous","L95G A192T",2
"lib1","SARS-CoV-2","CAGAATATATAGACAG",1,8.5,10.69,-0.08,0.11,3,1.01,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","CAGAATCACCAGCCAT",3,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G T55I D97F K128F",4
"lib1","SARS-CoV-2","CAGAATCCAATAGCCC",2,13.3,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","T15A D59V G86F N120G",4
"lib1","SARS-CoV-2","CAGAATCCACCACAAA",1,11.33,10.15,-0.62,0.09,2.99,1,0,">1 nonsynonymous","P149H G155N",2
"lib1","SARS-CoV-2","CAGAATCGATGGGATA",1,18.82,10.14,-0.62,0.08,2.95,1,0,">1 nonsynonymous","I138S G174L",2
"lib1","SARS-CoV-2","CAGAATCGCTATTCAC",2,0.31,NA,NA,NA,NA,NA,NA,"stop","C61K W106R S129* V173S",4
"lib1","SARS-CoV-2","CAGAATCGGCTTAGAA",4,54.54,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","T55N A145T F167R",3
"lib1","SARS-CoV-2","CAGAATCTAATGTTCA",1,17.64,10.08,-0.69,0.12,2.56,1.04,0.02,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CAGAATCTAATTGTCA",4,138.58,10.67,-0.09,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAATCTACAAATTT",4,40.6,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63K L131W A190L",3
"lib1","SARS-CoV-2","CAGAATGAATTACTAT",1,75.91,9.47,-1.3,0.08,2.53,1.09,0,">1 nonsynonymous","I88L N171S",2
"lib1","SARS-CoV-2","CAGAATGACTCAATCG",3,12.33,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K26P V77G I88F Y175D P197K",5
"lib1","SARS-CoV-2","CAGAATGATCCAAAAT",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L S41V C49S Y175H",4
"lib1","SARS-CoV-2","CAGAATGCCATACTAT",3,191,10.08,-0.68,0.06,2.66,1.03,0,">1 nonsynonymous","V11L P96G K198V",3
"lib1","SARS-CoV-2","CAGAATGCGAGTTCAT",2,54.89,10.18,-0.58,0.05,2.81,1,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","CAGAATGGATTAGGGA",2,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L S41Y D59L K94V C102F S129N D137L",7
"lib1","SARS-CoV-2","CAGAATGGTACGACCG",4,100.15,6.11,-4.65,0.87,1.5,1.18,0.02,">1 nonsynonymous","V37L F167S",2
"lib1","SARS-CoV-2","CAGAATGTATACATAT",3,34.76,10.39,-0.37,0.09,2.97,1.02,0,">1 nonsynonymous","A18S C61P K132L",3
"lib1","SARS-CoV-2","CAGAATGTGCGCCTTA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","A22K Y35I D98S N107F L122*",5
"lib1","SARS-CoV-2","CAGAATTAAATTTTAG",6,139.88,9.41,-1.36,0.13,2.45,1.13,0.01,">1 nonsynonymous","A67F Q84M E135S F156A K198N",5
"lib1","SARS-CoV-2","CAGAATTAATACGAAA",3,9.67,10.97,0.21,0.13,2.93,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAGAATTAATTAAGCT",2,8.24,10.27,-0.49,0.13,2.9,1.12,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","CAGAATTACAATTAAT",1,0.25,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CAGAATTGAGTACCAA",2,39.89,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F12S Y50I D97Y",3
"lib1","SARS-CoV-2","CAGAATTTGATAAGGC",3,64.43,6,-4.76,2,3,1.35,0.01,">1 nonsynonymous","N58D A81F L95H N107H Y143L Q176L",6
"lib1","SARS-CoV-2","CAGAATTTTGTCAAAT",3,39.83,10.8,0.03,0.1,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGACAAAATACAGAA",1,2.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","CAGACAAACAGGCGGT",4,7.15,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F12E D98V V103S L122F A145F K199M",6
"lib1","SARS-CoV-2","CAGACAAATAGACATC",4,34.33,9.9,-0.86,0.08,2.11,1.01,0,"1 nonsynonymous","V11D",1
"lib1","SARS-CoV-2","CAGACAAATGACCCTA",1,13.22,11.05,0.29,0.1,2.96,1,0.01,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","CAGACAAATTCCTCAA",6,8.11,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33S W106M G155F",3
"lib1","SARS-CoV-2","CAGACAAATTGTCTGT",2,4.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G166I",1
"lib1","SARS-CoV-2","CAGACAACAACTTTGT",8,235.25,9.57,-1.19,0.06,2.86,1.07,0,">1 nonsynonymous","Y39L T140R T170L",3
"lib1","SARS-CoV-2","CAGACAACGATATAAA",3,2.27,NA,NA,NA,NA,NA,NA,"stop","Y35H P82*",2
"lib1","SARS-CoV-2","CAGACAACGTAAATCC",11,326.2,10.76,0,0.07,2.9,1.07,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","CAGACAAGATTAGCAG",5,0.84,NA,NA,NA,NA,NA,NA,"stop","K26* V37S T55I",3
"lib1","SARS-CoV-2","CAGACAAGCATTAAAA",2,37.16,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F17N K56A C61H P133V V173N",5
"lib1","SARS-CoV-2","CAGACAAGTTTCAAAG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","E10Q S45Y L122G K128* Q168*",5
"lib1","SARS-CoV-2","CAGACAATCAACGTGG",1,7.02,6.36,-4.4,2,1.5,1.18,0.06,">1 nonsynonymous","T15Q V77A N118S V173I",4
"lib1","SARS-CoV-2","CAGACAATTAATAACA",2,1.08,NA,NA,NA,NA,NA,NA,"stop","C61A R73K I80K Q84V G196R T201*",6
"lib1","SARS-CoV-2","CAGACAATTAGTTCTC",1,22.37,10.78,0.02,0.05,2.93,1.06,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","CAGACAATTCAATTAC",4,71.67,9.68,-1.08,0.06,2.77,1.08,0,">1 nonsynonymous","Y35V N118H",2
"lib1","SARS-CoV-2","CAGACACAAAAGGCAT",4,1.71,NA,NA,NA,NA,NA,NA,"stop","K94T N110*",2
"lib1","SARS-CoV-2","CAGACACAAGCTCCGA",3,58.99,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T85P G116C Y165K",3
"lib1","SARS-CoV-2","CAGACACAAGTTAAAT",7,64.78,6.17,-4.6,0.79,1.5,1.19,0.02,">1 nonsynonymous","R16N S29G V77W I88T L95P",5
"lib1","SARS-CoV-2","CAGACACAGCCATTGC",7,99.74,10.46,-0.31,0.09,2.89,1.04,0,">1 nonsynonymous","R78S E186Y",2
"lib1","SARS-CoV-2","CAGACACCAGCTACGG",3,1.34,NA,NA,NA,NA,NA,NA,"stop","S41E D68S W106*",3
"lib1","SARS-CoV-2","CAGACACCATACCAAC",5,25.35,9.81,-0.96,0.07,2.75,1.09,0,">1 nonsynonymous","A105T E154V",2
"lib1","SARS-CoV-2","CAGACACGAACTTACG",3,53.24,9.86,-0.9,0.04,2.75,1.08,0,">1 nonsynonymous","V37F N107C L122F E135M G174A",5
"lib1","SARS-CoV-2","CAGACACGTGAGCGCA",5,47.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50S N92S",2
"lib1","SARS-CoV-2","CAGACACTCGATGTCC",1,1.15,NA,NA,NA,NA,NA,NA,"stop","I2L Y35* Y50A P133*",4
"lib1","SARS-CoV-2","CAGACAGAATAATCGG",11,142.53,10.08,-0.68,0.07,2.8,1.05,0,">1 nonsynonymous","D90M Q144M",2
"lib1","SARS-CoV-2","CAGACAGATAAAATTA",4,48.99,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S41Q Y143I R179Y",3
"lib1","SARS-CoV-2","CAGACAGATGATTACT",2,112.01,10.22,-0.55,0.07,2.86,1.03,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","CAGACAGCAACGACAA",2,19.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y93Q V103D I142F",3
"lib1","SARS-CoV-2","CAGACAGGAACCACGA",1,15.04,10.83,0.07,0.08,2.82,1.05,0.01,">1 nonsynonymous","T3N L60T",2
"lib1","SARS-CoV-2","CAGACAGTAAATTTGA",1,29.08,10.11,-0.65,0.08,2.71,1.03,0,">1 nonsynonymous","F8L N13Q G83M D90N",4
"lib1","SARS-CoV-2","CAGACAGTAGAGATTA",1,45.7,10.63,-0.14,0.04,2.87,1.07,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","CAGACATAAAATAACG",10,5.82,7.15,-3.62,1.25,3,1.32,0.05,">1 nonsynonymous","N4L N107F V173P",3
"lib1","SARS-CoV-2","CAGACATAATATAGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30G K128T E141Y Q168T",4
"lib1","SARS-CoV-2","CAGACATAATTATGAA",1,12.5,6.55,-4.21,0.5,1.5,1.17,0.05,">1 nonsynonymous","K56M P82A Y119L Y143R C158L L188S",6
"lib1","SARS-CoV-2","CAGACATAATTTGTTC",5,37.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F17R G155V",2
"lib1","SARS-CoV-2","CAGACATATACCAGAA",4,16.07,10.65,-0.11,0.08,2.85,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGACATATCCAAACT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","I2K F8* A14W F99L",4
"lib1","SARS-CoV-2","CAGACATCCCATGATA",19,211.13,10.18,-0.58,0.05,2.63,1.02,0,">1 nonsynonymous","N40A I104A S129V",3
"lib1","SARS-CoV-2","CAGACATCGAAATGAG",3,25.16,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51V V52P I72T N92I W106R",5
"lib1","SARS-CoV-2","CAGACATTAGACGGTC",3,29.96,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S36M F70I G116W Y165Q",4
"lib1","SARS-CoV-2","CAGACATTCAAGGCCA",2,118.33,10.75,-0.01,0.05,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGACATTGACTCTCC",8,92.47,10.8,0.04,0.07,2.92,1.03,0,">1 nonsynonymous","P54T L60Y",2
"lib1","SARS-CoV-2","CAGACATTTACAAAAT",3,12.58,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","S45E Y119N K132T Q168P",4
"lib1","SARS-CoV-2","CAGACCAAACCCCAAT",1,52,9.86,-0.9,0.08,2.1,1.07,0,">1 nonsynonymous","T46L N64G A105M",3
"lib1","SARS-CoV-2","CAGACCAACCATACGC",7,60.79,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6R W23I Y39W K114C",4
"lib1","SARS-CoV-2","CAGACCAACGTAACAA",1,57.21,10.62,-0.15,0.05,2.93,1,0,">1 nonsynonymous","S29F I142M",2
"lib1","SARS-CoV-2","CAGACCAGACGGTCCC",6,36.32,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V11F R78Y I104R",3
"lib1","SARS-CoV-2","CAGACCCAAAGCATCC",2,95.94,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V37L G101M Y121L",3
"lib1","SARS-CoV-2","CAGACCCACTTCCCAA",6,79.97,10.18,-0.58,0.1,2.61,1,0,">1 nonsynonymous","Y35K F44S",2
"lib1","SARS-CoV-2","CAGACCCAGGAATGAA",6,59.46,10.32,-0.44,0.04,2.92,1.03,0,"1 nonsynonymous","A18W",1
"lib1","SARS-CoV-2","CAGACCCCGACATATT",1,4.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","CAGACCCGACATCTCT",4,39.58,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","P82V R124A F160N",3
"lib1","SARS-CoV-2","CAGACCCTTGAGACGA",3,28.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G116I C150S",2
"lib1","SARS-CoV-2","CAGACCGAGGCCCCGC",2,36.78,6,-4.76,1.39,1.5,1.15,0.02,">1 nonsynonymous","F8D V20P A145P",3
"lib1","SARS-CoV-2","CAGACCGTAGCATAAC",1,12.44,10.07,-0.69,0.16,1.79,1.02,0.01,">1 nonsynonymous","T85I R127H",2
"lib1","SARS-CoV-2","CAGACCTAATGACTCG",4,58.61,10.67,-0.09,0.06,2.87,1.08,0,">1 nonsynonymous","Y35W K114W G174R",3
"lib1","SARS-CoV-2","CAGACCTCAAGGGCTA",3,25.61,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","D90L C150W",2
"lib1","SARS-CoV-2","CAGACCTGGTAACAAA",7,29.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K87L P161L H189L",3
"lib1","SARS-CoV-2","CAGACGAAAATATCGA",7,1.09,NA,NA,NA,NA,NA,NA,"stop","I2P D90* A105P L162K Y178A",5
"lib1","SARS-CoV-2","CAGACGAAGAGCAGGA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","I28* Y35D V103Y P149C L162V T201S",6
"lib1","SARS-CoV-2","CAGACGACCAACTATT",5,21.14,6.35,-4.41,0.44,1.5,1.06,0.02,">1 nonsynonymous","V20C K48G K56F A105Y D137R G146R Q163V",7
"lib1","SARS-CoV-2","CAGACGATGCAGTGCA",1,107.01,10.73,-0.03,0.07,2.82,1.08,0,">1 nonsynonymous","Y35L Q84G",2
"lib1","SARS-CoV-2","CAGACGATGGCATGAA",1,2.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","CAGACGCATGATATAC",1,6.77,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","A33D G74V",2
"lib1","SARS-CoV-2","CAGACGCCTAAAAGTT",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I S19G K56F",3
"lib1","SARS-CoV-2","CAGACGCTACAAACTA",16,1.83,NA,NA,NA,NA,NA,NA,"stop","G9L P82* T140R S147F",4
"lib1","SARS-CoV-2","CAGACGGAAATGTTAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N1* L60Q I88G Y93S D112V V181T",6
"lib1","SARS-CoV-2","CAGACGGCATAAGGCA",2,66.16,10.72,-0.05,0.04,2.95,1.02,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","CAGACGGTTGATGCCA",3,143,10.91,0.15,0.08,2.93,1.03,0,">1 nonsynonymous","L125M S147N",2
"lib1","SARS-CoV-2","CAGACGTAGGCCCATT",3,27.02,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N40L N107W I142A",3
"lib1","SARS-CoV-2","CAGACGTGTTGCGGAG",4,113.52,8.36,-2.4,0.13,1.96,1.16,0.01,">1 nonsynonymous","I2P K56W G117L S200Y",4
"lib1","SARS-CoV-2","CAGACGTTTAACTTTC",1,37.21,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","S29D C49G",2
"lib1","SARS-CoV-2","CAGACTAAATAAAAGA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C49L V77G Y123*",3
"lib1","SARS-CoV-2","CAGACTAATGGATCTT",5,54.35,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18T K132R G152Y R179A",4
"lib1","SARS-CoV-2","CAGACTACAGTCTCGC",4,38.68,10.7,-0.06,0.07,2.96,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGACTAGGTCAAGAA",3,6.89,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","E10Y A42C N109V Y143F F156C",5
"lib1","SARS-CoV-2","CAGACTAGTCGAAGGA",5,37.5,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V103M N118S F167C Y175L",4
"lib1","SARS-CoV-2","CAGACTAGTGGACGGT",5,48.05,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F70S Y165L",2
"lib1","SARS-CoV-2","CAGACTATAATTACTA",6,145.29,9.94,-0.82,0.08,2.79,1.06,0,">1 nonsynonymous","S41M L111S",2
"lib1","SARS-CoV-2","CAGACTATCAAAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L57* D90P F134G P161S",4
"lib1","SARS-CoV-2","CAGACTCAGATCCATT",2,83.65,8.56,-2.21,0.17,1.96,1.17,0.01,">1 nonsynonymous","S69Q K87D",2
"lib1","SARS-CoV-2","CAGACTCCCTGCTGAT",3,24.68,6,-4.76,1.84,1.5,1.15,0.01,">1 nonsynonymous","S36W N58K W106V Y121S Y159Q",5
"lib1","SARS-CoV-2","CAGACTCCTTAAATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35I E141* C150T",3
"lib1","SARS-CoV-2","CAGACTCGGTCGATTC",7,47.34,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","A14E L38N V65N P149S E154G Y165R",6
"lib1","SARS-CoV-2","CAGACTCGGTTAGGAC",3,37.39,10.84,0.07,0.11,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGACTCTTAACTTTA",3,25.54,6.28,-4.48,0.53,1.5,1.17,0.02,">1 nonsynonymous","G9Q C61G V71R P133T",4
"lib1","SARS-CoV-2","CAGACTGGCCAGGGCC",13,320.45,10.78,0.02,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGACTGGCGATTCAC",2,164.23,6,-4.76,1.61,1.5,1.15,0.01,">1 nonsynonymous","F17Y A81V I88M",3
"lib1","SARS-CoV-2","CAGACTTAATATCGCG",2,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V S53H D59P D112H C150T Q168D",6
"lib1","SARS-CoV-2","CAGACTTCACATAAAG",1,15.46,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","G9V N92W D98L G146I G155Y",5
"lib1","SARS-CoV-2","CAGACTTCATTTGATC",3,0.62,NA,NA,NA,NA,NA,NA,"stop","C6R K26M S53D D90S L122* G146F E154M Q176S",8
"lib1","SARS-CoV-2","CAGACTTCCTTCTCAA",1,9.98,10.74,-0.03,0.2,2.92,1,0.01,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","CAGACTTGCTGACTGC",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F A33H Y119V L183N",4
"lib1","SARS-CoV-2","CAGAGAAATTAGTACA",2,55.48,8.65,-2.11,0.27,1.5,1,0.03,">1 nonsynonymous","L131A L162V",2
"lib1","SARS-CoV-2","CAGAGAACACCATCGC",2,34.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9V R25W G116F R136A N171A",5
"lib1","SARS-CoV-2","CAGAGAACGCGGATTT",1,5.24,10.82,0.06,0.09,3,1,0,">1 nonsynonymous","I2R T85S",2
"lib1","SARS-CoV-2","CAGAGAACGCTGATTA",3,51.11,9.9,-0.86,0.1,2.06,1.15,0,">1 nonsynonymous","Y123H E135V",2
"lib1","SARS-CoV-2","CAGAGAATCCTATAGT",4,2.56,NA,NA,NA,NA,NA,NA,"stop","A67H T140S P169* Q176E L183P",5
"lib1","SARS-CoV-2","CAGAGACAAATAGATG",5,49.58,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A14V D112Y R127S P177A",4
"lib1","SARS-CoV-2","CAGAGACACAAACTAA",1,28.97,10.77,0.01,0.06,2.86,1.11,0,">1 nonsynonymous","L122T S200C",2
"lib1","SARS-CoV-2","CAGAGACCGAGTTGAC",5,0.61,NA,NA,NA,NA,NA,NA,"stop","A42F A89W N118* P161V",4
"lib1","SARS-CoV-2","CAGAGACCTAAAGAAG",9,128.23,10.79,0.03,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAGACGCTTTATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","CAGAGACTAAGATCCA",4,82.63,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G117S C150Y V173D",3
"lib1","SARS-CoV-2","CAGAGAGAAAGACCAC",3,1.23,NA,NA,NA,NA,NA,NA,"stop","K56A D112L Y178L K198*",4
"lib1","SARS-CoV-2","CAGAGAGAGTAGACTT",10,85.69,10.18,-0.58,0.1,2.53,1,0,">1 nonsynonymous","K26R T63R W106Q",3
"lib1","SARS-CoV-2","CAGAGAGATGTCCTAC",7,34.94,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23M G86L D97M",3
"lib1","SARS-CoV-2","CAGAGAGATTAACGTG",7,98.13,9.85,-0.92,0.04,2.86,1.07,0,">1 nonsynonymous","K56T D97L Y119K",3
"lib1","SARS-CoV-2","CAGAGAGTACTTAGAA",4,33.45,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N1M F12D S45L A105L",4
"lib1","SARS-CoV-2","CAGAGATCGTGCTGAT",3,68.06,10.72,-0.05,0.05,2.94,1.02,0,">1 nonsynonymous","Q79K K87I N171T",3
"lib1","SARS-CoV-2","CAGAGATGACGCACTT",5,54.41,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R27G Y35N C61D T85W D90L L162Y P197Y",7
"lib1","SARS-CoV-2","CAGAGATGATAGCGGC",2,23.17,10.82,0.06,0.09,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAGCAACAGGAAAT",4,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C F70P A89L P169F",4
"lib1","SARS-CoV-2","CAGAGCACAAATTCGT",2,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G T15G D98L T148P",4
"lib1","SARS-CoV-2","CAGAGCAGACCTCAGG",10,50.67,8.95,-1.82,0.21,1.5,1.12,0.02,">1 nonsynonymous","F12W S139L",2
"lib1","SARS-CoV-2","CAGAGCAGAGGGATTT",1,18.03,10.49,-0.27,0.06,2.87,1.1,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","CAGAGCAGGCACCAAT",6,53.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N58I N109V L122T Y143S G174Q",5
"lib1","SARS-CoV-2","CAGAGCATCTTAGACA",4,53.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14V W23G F44D Y121L",4
"lib1","SARS-CoV-2","CAGAGCATGGGATCTA",1,13.52,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V11S K56C I88T F156A",4
"lib1","SARS-CoV-2","CAGAGCCAACTTGCGG",5,55.82,10.35,-0.42,0.04,2.86,1.06,0,">1 nonsynonymous","N64G Q144R",2
"lib1","SARS-CoV-2","CAGAGCCACTTCCCAC",10,205.41,10.79,0.03,0.05,2.92,1.04,0,"1 nonsynonymous","P197Q",1
"lib1","SARS-CoV-2","CAGAGCCGCGTCCAAA",2,10.11,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N4A V20R S45G R124S K132Y",5
"lib1","SARS-CoV-2","CAGAGCCGCTATCCAA",1,8.71,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V32S V153R V182M",3
"lib1","SARS-CoV-2","CAGAGCCTATTTTTAC",3,32.05,6.29,-4.47,0.51,1.5,1.17,0.01,">1 nonsynonymous","F126N S147P G152L Y159I",4
"lib1","SARS-CoV-2","CAGAGCCTGCTTTTGG",1,7.86,6.27,-4.49,2,1.5,1.21,0.04,">1 nonsynonymous","F62E A89V C150A",3
"lib1","SARS-CoV-2","CAGAGCGCATCAAATA",11,11.68,NA,NA,NA,NA,NA,NA,"stop","R25S E141*",2
"lib1","SARS-CoV-2","CAGAGCGCTTAAAAGA",5,27.52,10.03,-0.74,0.1,2.68,1.02,0,">1 nonsynonymous","G9L T140N P149F",3
"lib1","SARS-CoV-2","CAGAGCTAACCTTTTA",2,5.87,9.2,-1.57,0.11,2.92,1.14,0,">1 nonsynonymous","A89L A105I",2
"lib1","SARS-CoV-2","CAGAGCTAGGACCGAA",4,24.45,10.29,-0.48,0.07,2.8,1.1,0,">1 nonsynonymous","N1R E154D",2
"lib1","SARS-CoV-2","CAGAGGACAATATCAT",3,7.3,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F62V L95R G155V",3
"lib1","SARS-CoV-2","CAGAGGACACAATGCA",9,69.19,8.98,-1.78,0.19,1.68,1.18,0.01,">1 nonsynonymous","D59M A89T N120W",3
"lib1","SARS-CoV-2","CAGAGGATGACTCTCG",2,23.23,10.77,0,0.13,2.96,1.03,0.01,"1 nonsynonymous","K26I",1
"lib1","SARS-CoV-2","CAGAGGCACTACTATT",8,68.37,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37L I72H I88C D112R L122A R136C",6
"lib1","SARS-CoV-2","CAGAGGCGGAAAGTAG",2,39.14,10.61,-0.15,0.04,2.87,1.05,0,">1 nonsynonymous","Y66Q S164A",2
"lib1","SARS-CoV-2","CAGAGGCTATTCCGAA",5,27.64,8.24,-2.53,0.16,1.5,1.17,0.01,">1 nonsynonymous","V37G Q84N Y123N",3
"lib1","SARS-CoV-2","CAGAGGCTTTCTATTA",8,8.6,NA,NA,NA,NA,NA,NA,"stop","E10L W23T V65D W106R N130* I142E",6
"lib1","SARS-CoV-2","CAGAGGGCGTTTTAAA",10,45.73,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","F47S N58T P96H Q176L",4
"lib1","SARS-CoV-2","CAGAGGTACTCATTAA",2,28.91,10.71,-0.06,0.07,2.81,1.02,0,">1 nonsynonymous","F12I T55I P197Q",3
"lib1","SARS-CoV-2","CAGAGGTCATCTTAAG",8,145.9,10.22,-0.55,0.06,2.67,1.02,0,">1 nonsynonymous","N1M P7S A89S",3
"lib1","SARS-CoV-2","CAGAGGTGTCAGGTCT",6,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M K128Q",2
"lib1","SARS-CoV-2","CAGAGGTTAGCTTCGC",2,32.32,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F70A V77F",2
"lib1","SARS-CoV-2","CAGAGTAACTTGTACT",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I D34G F160T Q176V",4
"lib1","SARS-CoV-2","CAGAGTAATTACAACG",1,27.38,10.82,0.06,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAGTATCGCCGGTT",3,57.75,10.7,-0.06,0.05,2.94,1.05,0,"1 nonsynonymous","P54Y",1
"lib1","SARS-CoV-2","CAGAGTATGACGCGTA",2,21.67,7.28,-3.49,0.32,1.5,1.08,0.03,">1 nonsynonymous","G9W Y91V W106T E141M P149I",5
"lib1","SARS-CoV-2","CAGAGTATGTAAACCG",3,41.39,10.72,-0.05,0.1,2.8,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGAGTATTCAAGCAA",1,64.97,10.59,-0.18,0.05,2.85,1.05,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","CAGAGTCAATACCCAT",6,113.16,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y66D Y91K T100M G146W",4
"lib1","SARS-CoV-2","CAGAGTCAATTATATA",1,21.07,9.24,-1.52,0.15,1.65,1.09,0.01,">1 nonsynonymous","K87V L95A",2
"lib1","SARS-CoV-2","CAGAGTCAGCGAATAA",5,33.91,10.73,-0.03,0.07,2.87,1.03,0,"1 nonsynonymous","V173A",1
"lib1","SARS-CoV-2","CAGAGTCCACCGAATA",2,1.59,NA,NA,NA,NA,NA,NA,"stop","W23G Y50V D68* K87R D97S",5
"lib1","SARS-CoV-2","CAGAGTCCACGCGTCC",1,15.74,6.48,-4.28,0.47,1.5,1.1,0.02,">1 nonsynonymous","F44W V52S V103A",3
"lib1","SARS-CoV-2","CAGAGTCCATACGGTA",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83R A89S G172D",3
"lib1","SARS-CoV-2","CAGAGTGAAACCTCTT",3,46.14,10.68,-0.09,0.06,2.91,1.02,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","CAGAGTGACTCTGATC",8,90.4,6.43,-4.33,0.66,1.5,1.29,0.03,">1 nonsynonymous","T3S A81T P82A",3
"lib1","SARS-CoV-2","CAGAGTGCAGCACACC",2,0.94,NA,NA,NA,NA,NA,NA,"stop","V37G K48* L95V P197R",4
"lib1","SARS-CoV-2","CAGAGTGCGCTAGAAA",1,19.99,9.95,-0.82,0.11,2.76,1,0.01,">1 nonsynonymous","G9Y V37Y C61W K114C",4
"lib1","SARS-CoV-2","CAGAGTGGGCGCGAAC",2,15.68,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L60P W106G S113P Y159F",4
"lib1","SARS-CoV-2","CAGAGTGTTTTCTTCT",5,12.5,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","N24F K87N E141K Y178G P191I",5
"lib1","SARS-CoV-2","CAGAGTTAACGCAAAT",3,12.65,9.07,-1.7,0.22,1.67,1.06,0.03,">1 nonsynonymous","A81Q P96Q",2
"lib1","SARS-CoV-2","CAGAGTTACCGGATAG",7,63.23,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64S G74W P82L T85D G146M G155N",6
"lib1","SARS-CoV-2","CAGAGTTTAATCTAAC",5,55.87,10.11,-0.65,0.08,2.78,1.02,0,">1 nonsynonymous","T63D F99Y",2
"lib1","SARS-CoV-2","CAGAGTTTATGACGTA",10,24.94,8.22,-2.54,0.36,1.5,1.03,0.08,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","CAGAGTTTTGCTATGC",4,25.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49S F62S D68V A81V",4
"lib1","SARS-CoV-2","CAGATAAAAACCGCAA",1,18.52,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P96M N107Y G196V",3
"lib1","SARS-CoV-2","CAGATAAAACGAGTTA",5,42.11,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K56D G86I",2
"lib1","SARS-CoV-2","CAGATAAACACTAGTC",3,87.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4G S29P V37Q T85R V115T C158N",6
"lib1","SARS-CoV-2","CAGATAAACATCCGAG",12,214.25,9.89,-0.88,0.1,2.11,1.03,0,">1 nonsynonymous","S45T D90C S129T I138H",4
"lib1","SARS-CoV-2","CAGATAAAGACTCCGC",4,124.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y39N V65D G172R",3
"lib1","SARS-CoV-2","CAGATAAAGCAAAACA",4,76.88,6.61,-4.16,0.34,1.5,1.14,0.01,">1 nonsynonymous","K48C Y119G A145D",3
"lib1","SARS-CoV-2","CAGATAAAGTGAAAGT",4,27.82,6.64,-4.12,0.59,1.71,1.3,0.05,">1 nonsynonymous","L60V D98E P149M Y175R",4
"lib1","SARS-CoV-2","CAGATAAATATCAACA",2,0.88,NA,NA,NA,NA,NA,NA,"stop","Q84* W106V",2
"lib1","SARS-CoV-2","CAGATAAATTGGTCAT",4,122.65,8.1,-2.66,0.2,1.73,1.12,0.01,">1 nonsynonymous","G83S K87N Q176L",3
"lib1","SARS-CoV-2","CAGATAACAGGTGACT",4,58.8,10.68,-0.08,0.07,2.91,1.07,0,"1 nonsynonymous","Y39T",1
"lib1","SARS-CoV-2","CAGATAACAGTCGCCA",5,21.81,8.96,-1.8,0.31,1.5,1.03,0.04,">1 nonsynonymous","D34I G83I P197L",3
"lib1","SARS-CoV-2","CAGATAACAGTCTAAG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W I28K C61R",3
"lib1","SARS-CoV-2","CAGATAACCTCTAGAA",6,27.92,10.79,0.02,0.09,2.82,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CAGATAACGGAGATCT",1,47.94,10.57,-0.2,0.06,2.92,1.02,0,">1 nonsynonymous","L122W E141V",2
"lib1","SARS-CoV-2","CAGATAATACCTGCCA",2,51.7,10.74,-0.02,0.06,2.97,1,0,">1 nonsynonymous","V37N A105S",2
"lib1","SARS-CoV-2","CAGATAATCGATACCT",14,57.9,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P82L I138F P149A",3
"lib1","SARS-CoV-2","CAGATAATCTAAATTT",7,2.76,NA,NA,NA,NA,NA,NA,"stop","A42S G83S D90M Y121* Q176*",5
"lib1","SARS-CoV-2","CAGATAATGCCACGTA",6,66.01,9.58,-1.18,0.11,2.68,1.07,0,">1 nonsynonymous","R16H K87R N107C N120H P149L",5
"lib1","SARS-CoV-2","CAGATACAACCTCAAA",4,30.74,6,-4.76,1.79,3,1.16,0.01,">1 nonsynonymous","N13V W23S S129G P161V",4
"lib1","SARS-CoV-2","CAGATACAACTTAAGA",5,127.54,10.8,0.03,0.06,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGATACAAGAATACT",1,95.07,10.52,-0.25,0.04,2.84,1.06,0,"1 nonsynonymous","T15V",1
"lib1","SARS-CoV-2","CAGATACATTAGTAAT",8,116.3,10.67,-0.09,0.06,2.91,1.04,0,">1 nonsynonymous","R16S C61P T148I",3
"lib1","SARS-CoV-2","CAGATACCCGAGTCTG",3,72.83,6.09,-4.67,0.86,1.5,1.24,0.02,">1 nonsynonymous","F8L N13K V37C V173T",4
"lib1","SARS-CoV-2","CAGATACCTTGGCTTA",6,123.66,8.81,-1.95,0.06,2.77,1.1,0,">1 nonsynonymous","N40T S41A T170L",3
"lib1","SARS-CoV-2","CAGATACGCATAAACT",3,52.69,9.18,-1.59,0.18,1.62,1.06,0.01,">1 nonsynonymous","I138T L162K V173F",3
"lib1","SARS-CoV-2","CAGATACGCCGCTGGT",3,34.58,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","W23E R136F",2
"lib1","SARS-CoV-2","CAGATACTAATCAATT",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T L162Y",2
"lib1","SARS-CoV-2","CAGATACTGCCCAAAT",3,1.15,NA,NA,NA,NA,NA,NA,"stop","L60N V103F D112* T140R",4
"lib1","SARS-CoV-2","CAGATACTGCTAAAAA",1,77.46,10.8,0.04,0.09,2.87,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGATAGATATTACTA",3,47.68,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L95M V103C S184T",3
"lib1","SARS-CoV-2","CAGATAGATATTGCAT",2,52.09,9.15,-1.61,0.04,2.81,1.1,0,">1 nonsynonymous","A42D R73N T100V",3
"lib1","SARS-CoV-2","CAGATAGCGGCATACT",2,31.89,8.7,-2.07,0.23,1.81,1.15,0.02,">1 nonsynonymous","F8W C102L G152Y",3
"lib1","SARS-CoV-2","CAGATAGGAAGCTAAA",5,65.76,10.72,-0.04,0.06,2.87,1.08,0,">1 nonsynonymous","T55G Y66W",2
"lib1","SARS-CoV-2","CAGATAGGAGCGTTAT",13,185.74,10.55,-0.21,0.04,2.93,1.02,0,">1 nonsynonymous","S41G S147I",2
"lib1","SARS-CoV-2","CAGATAGGATTCCAAT",9,166.4,10.73,-0.03,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGATAGGGACCAACA",4,2.71,NA,NA,NA,NA,NA,NA,"stop","F12L V20K C61W V71K G86* N120S",6
"lib1","SARS-CoV-2","CAGATAGTGGCTTCAA",2,19.28,9.71,-1.05,0.11,2.55,1.22,0,">1 nonsynonymous","N107S L111H",2
"lib1","SARS-CoV-2","CAGATAGTTACCGATC",6,62.36,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V37H R73W I88E T201V",4
"lib1","SARS-CoV-2","CAGATAGTTCTGCGCG",1,112.88,9.78,-0.98,0.1,2.09,1.06,0,">1 nonsynonymous","Y39S Y178A S184F P191N",4
"lib1","SARS-CoV-2","CAGATATAACTTCGGA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","D90* K114Y Q144*",3
"lib1","SARS-CoV-2","CAGATATAGTCGTCCA",1,11.05,10.65,-0.12,0.06,2.94,1.06,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","CAGATATAGTGTTAAA",2,66.46,10.73,-0.03,0.05,2.96,1,0,"1 nonsynonymous","K94H",1
"lib1","SARS-CoV-2","CAGATATATTACATAC",1,6.1,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","D75E I88D V103S Y143R",4
"lib1","SARS-CoV-2","CAGATATCTGGGAGGG",1,8.24,10.47,-0.29,0.13,2.79,1.14,0.01,">1 nonsynonymous","K48L T63S",2
"lib1","SARS-CoV-2","CAGATATGAGAACGTG",4,1.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","CAGATATTTTGTAGAT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","D34S P82W I88* G172*",4
"lib1","SARS-CoV-2","CAGATCAACCTCTATT",2,58.7,10.08,-0.68,0.09,2.72,1.04,0,">1 nonsynonymous","R136N Y143F",2
"lib1","SARS-CoV-2","CAGATCAATATCCCAG",3,97.05,6,-4.76,1.94,1.5,1.15,0.02,">1 nonsynonymous","F134T N157V P177F",3
"lib1","SARS-CoV-2","CAGATCAGCCGCCGGG",2,6.1,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S108W R136T I142E C150L",4
"lib1","SARS-CoV-2","CAGATCATCGATCTTA",5,49.44,9.99,-0.77,0.1,2.01,1.02,0,">1 nonsynonymous","S29E W106S",2
"lib1","SARS-CoV-2","CAGATCATTAATAACC",3,65.59,9.22,-1.54,0.11,2.9,1.08,0.01,">1 nonsynonymous","D90C G166V",2
"lib1","SARS-CoV-2","CAGATCATTAGTAGAC",4,64.26,10.78,0.02,0.04,2.89,1.06,0,">1 nonsynonymous","S43V T148M",2
"lib1","SARS-CoV-2","CAGATCATTTTCAGTT",3,89.94,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","V37R D68V G146A Y178N",4
"lib1","SARS-CoV-2","CAGATCCAACATAGTG",6,55.05,7.38,-3.38,0.17,1.52,1.12,0.01,"1 nonsynonymous","C150G",1
"lib1","SARS-CoV-2","CAGATCCAATAATCCA",3,17.56,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G51E L57C G152P F156W",4
"lib1","SARS-CoV-2","CAGATCCCCCTCCTAC",4,71.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D97N L125S D137L E154I L162W",5
"lib1","SARS-CoV-2","CAGATCCTGAACAACA",3,23.11,6.56,-4.2,0.6,1.88,1.32,0.03,">1 nonsynonymous","E10Y Y165L",2
"lib1","SARS-CoV-2","CAGATCGATCCCTAGT",2,9.87,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","P7R N13I S19A I88L",4
"lib1","SARS-CoV-2","CAGATCGTTTAAATCG",3,41.1,9.81,-0.95,0.1,2.75,1.08,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","CAGATCTAAAACAGAT",6,67.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6M C158I",2
"lib1","SARS-CoV-2","CAGATCTATGGGGTGA",7,111.64,6,-4.76,1.39,1.5,1.22,0.02,">1 nonsynonymous","C61P K94M N120E Q163Y V173S",5
"lib1","SARS-CoV-2","CAGATCTATTAGCGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","A42G F62* D97A C102L F126R E141Y N151K F156L",8
"lib1","SARS-CoV-2","CAGATCTCCCTGCTAT",1,26.51,10.06,-0.71,0.04,2.97,1.02,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","CAGATCTGCTACAGTG",6,30.41,6.12,-4.64,0.93,1.5,1.25,0.02,">1 nonsynonymous","C31R D68A D98T V103N",4
"lib1","SARS-CoV-2","CAGATCTTCCAAGCCG",8,80.11,10.36,-0.41,0.06,2.86,1.03,0,">1 nonsynonymous","E10K S43G V153F",3
"lib1","SARS-CoV-2","CAGATGAAATATTATC",4,46.02,10.12,-0.65,0.07,2.86,1,0,">1 nonsynonymous","G155C G196W",2
"lib1","SARS-CoV-2","CAGATGAATAACGGGG",7,115.02,10.12,-0.64,0.07,2.82,1,0,">1 nonsynonymous","S41P K48N C61I E141N",4
"lib1","SARS-CoV-2","CAGATGACAAGCGGGT",3,40.99,10.94,0.18,0.09,2.92,1.02,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","CAGATGACAGCACCAG",3,68.32,10.64,-0.12,0.04,2.93,1,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","CAGATGACGCCCCTAT",5,95.15,10.25,-0.52,0.04,2.89,1.05,0,">1 nonsynonymous","K56H D98Y K114S",3
"lib1","SARS-CoV-2","CAGATGAGAATAATAA",1,12.7,7.08,-3.69,0.41,1.5,1.11,0.06,">1 nonsynonymous","L5I Y66T F167M",3
"lib1","SARS-CoV-2","CAGATGAGTCAACAAT",1,12.3,10.78,0.02,0.07,2.91,1.06,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","CAGATGAGTTCTCGCG",3,68.23,8.75,-2.01,0.07,2.91,1.04,0,">1 nonsynonymous","F126R E154L",2
"lib1","SARS-CoV-2","CAGATGATAAACATTT",2,11.75,9,-1.77,0.07,2.98,1,0,">1 nonsynonymous","F156E E186K T201L",3
"lib1","SARS-CoV-2","CAGATGATAAATAAGC",7,1.19,NA,NA,NA,NA,NA,NA,"stop","A33* Y66K T148A T170Y",4
"lib1","SARS-CoV-2","CAGATGATGACCCAAA",3,58.59,10.11,-0.65,0.07,2.77,1.02,0,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","CAGATGCAGAGAGAAA",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N G83A K94P",3
"lib1","SARS-CoV-2","CAGATGCGCACTAGCC",1,5.46,NA,NA,NA,NA,NA,NA,"stop","F12M V37G Y123* E141*",4
"lib1","SARS-CoV-2","CAGATGCTAAAAAAGT",7,1.33,NA,NA,NA,NA,NA,NA,"stop","V65* A89T D137L F167A",4
"lib1","SARS-CoV-2","CAGATGGAAAAAAGCC",4,32.71,9.94,-0.83,0.12,2.15,1.08,0.01,">1 nonsynonymous","L5D W106Y F160L K198A",4
"lib1","SARS-CoV-2","CAGATGGATTCCCAAA",8,69.17,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V103L L122G N171Q R179F",4
"lib1","SARS-CoV-2","CAGATGGGTCCTAATA",2,50.36,10.86,0.09,0.08,2.95,1,0,"1 nonsynonymous","T63E",1
"lib1","SARS-CoV-2","CAGATGGTGCATTACT",4,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E D112V G152I Q163S",4
"lib1","SARS-CoV-2","CAGATGTAAACTTCTA",3,23.42,7.96,-2.8,0.36,1.5,1.07,0.07,">1 nonsynonymous","L5P I28S Y91N S113K S147N",5
"lib1","SARS-CoV-2","CAGATGTACACCCCTA",2,30.66,8.84,-1.92,0.19,1.55,1.1,0.02,"1 nonsynonymous","V20G",1
"lib1","SARS-CoV-2","CAGATGTACGGTATTG",2,1.25,NA,NA,NA,NA,NA,NA,"stop","Q84N Y121E Q176*",3
"lib1","SARS-CoV-2","CAGATGTATGTGACTC",2,36.86,10.83,0.06,0.07,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGATGTCAATATCCT",6,20.13,10.38,-0.38,0.04,2.92,1.02,0,">1 nonsynonymous","Y39T D59V",2
"lib1","SARS-CoV-2","CAGATGTGATGAAAAT",9,38.98,8.06,-2.7,0.22,1.5,1.08,0.02,">1 nonsynonymous","N1R F126P",2
"lib1","SARS-CoV-2","CAGATGTTGGTGCTAA",3,62.82,8.9,-1.87,0.28,1.5,1.03,0.03,">1 nonsynonymous","G9E P82R A190I",3
"lib1","SARS-CoV-2","CAGATGTTGTTTTCAT",7,30.49,9.93,-0.83,0.1,2.45,1.06,0,">1 nonsynonymous","N40C N120L Q163M",3
"lib1","SARS-CoV-2","CAGATGTTTTCCAGCG",4,28.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N92S G101S",2
"lib1","SARS-CoV-2","CAGATGTTTTTTCGAA",6,36.03,7.45,-3.32,0.29,1.5,1.11,0.02,">1 nonsynonymous","T3K G86E T100I A190T",4
"lib1","SARS-CoV-2","CAGATTAAACGACAAA",6,0.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12L",1
"lib1","SARS-CoV-2","CAGATTAAAGCATGCC",2,27.92,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N13L A18L R27K R73K",4
"lib1","SARS-CoV-2","CAGATTAACGCCTATC",5,6.59,NA,NA,NA,NA,NA,NA,"stop","R27G S41F A105*",3
"lib1","SARS-CoV-2","CAGATTAAGCTAACGT",3,61.8,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N24F C49I K94S Y159V F167I V173N",6
"lib1","SARS-CoV-2","CAGATTAAGTTATGTC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","CAGATTAATCTTACGG",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S Y91L L131D",3
"lib1","SARS-CoV-2","CAGATTAATTAGGCGA",2,10.72,10.42,-0.34,0.13,2.93,1.08,0.01,">1 nonsynonymous","D59T G174S T201K",3
"lib1","SARS-CoV-2","CAGATTACCAAAACAC",13,201.09,10.74,-0.03,0.07,2.88,1.07,0,"1 nonsynonymous","T55M",1
"lib1","SARS-CoV-2","CAGATTACCTGAGAAC",2,32.87,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I88M L111P Y121W F134A Y143S",5
"lib1","SARS-CoV-2","CAGATTAGACCTTGCA",3,50.2,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9R D90S Q144H S147Y R179W",5
"lib1","SARS-CoV-2","CAGATTAGCGAATAAA",1,18.85,10.91,0.14,0.1,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGATTATTTACGGCA",2,22.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5K S19K C49S",3
"lib1","SARS-CoV-2","CAGATTCAGGTAACGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63N G86T T148S",3
"lib1","SARS-CoV-2","CAGATTCCACAGGATG",1,7.42,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9C Y93S V153C",3
"lib1","SARS-CoV-2","CAGATTCCACCGCATT",9,130.33,10.65,-0.12,0.04,2.9,1.03,0,">1 nonsynonymous","A42V Y50F P197G",3
"lib1","SARS-CoV-2","CAGATTCGTATAAATT",2,62.8,9.77,-0.99,0.05,2.86,1.04,0,">1 nonsynonymous","E10L T55K F156Q",3
"lib1","SARS-CoV-2","CAGATTCTAAATTAAG",10,1.39,NA,NA,NA,NA,NA,NA,"stop","S43* G155M Y175M",3
"lib1","SARS-CoV-2","CAGATTCTGAACCTAC",1,1.58,NA,NA,NA,NA,NA,NA,"stop","V37T F47L K56* N58S G86C N107W F160L",7
"lib1","SARS-CoV-2","CAGATTGAAAAGTTTC",8,52.5,6.05,-4.72,1.16,1.5,1.23,0.03,">1 nonsynonymous","T15L Q84S P96M T140V",4
"lib1","SARS-CoV-2","CAGATTGCAGATTCAT",7,93.23,6.12,-4.65,0.97,1.5,1.23,0.02,">1 nonsynonymous","G9R A89N P96S",3
"lib1","SARS-CoV-2","CAGATTGCAGGACGCG",3,38.39,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","R27W D90P N120S N130L",4
"lib1","SARS-CoV-2","CAGATTGGAAGCAAAC",3,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E N151K G152L",3
"lib1","SARS-CoV-2","CAGATTGTACCTCAAC",6,113.4,10.5,-0.27,0.05,2.91,1,0,">1 nonsynonymous","K56L S164F",2
"lib1","SARS-CoV-2","CAGATTGTACTTTCCC",3,1.76,NA,NA,NA,NA,NA,NA,"stop","V32W D59* L122V",3
"lib1","SARS-CoV-2","CAGATTTAAAACGAAG",2,0.06,NA,NA,NA,NA,NA,NA,"stop","F44* Y50T D90I T100I A105F N120G P133H",7
"lib1","SARS-CoV-2","CAGATTTACCACAAAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F8* F134R N157G",3
"lib1","SARS-CoV-2","CAGATTTACTGAGTGA",5,0.82,NA,NA,NA,NA,NA,NA,"stop","Y91L T148*",2
"lib1","SARS-CoV-2","CAGATTTCAGTCGGAG",5,3.54,NA,NA,NA,NA,NA,NA,"stop","L5R G74* I80G A89E A105V N107S V115S",7
"lib1","SARS-CoV-2","CAGATTTCTAACAGCC",3,41.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R25L F99I A105S",3
"lib1","SARS-CoV-2","CAGATTTGAGGTGTCA",5,35.4,10.6,-0.16,0.07,2.83,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGATTTGCACCCAAT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P Q84R P96N K132F C158L",5
"lib1","SARS-CoV-2","CAGATTTTGAGAATTA",5,18.31,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F8P A89L N120V T201I",4
"lib1","SARS-CoV-2","CAGATTTTTATGTACC",2,25.68,9.46,-1.31,0.16,2.01,1.05,0.01,">1 nonsynonymous","N107P E135L",2
"lib1","SARS-CoV-2","CAGATTTTTGCTATGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H A81Y D90M I104L P149S P177L E186F",7
"lib1","SARS-CoV-2","CAGATTTTTGTGGCAT",2,21.32,10.47,-0.29,0.09,2.87,1.07,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","CAGCAAAAAAAGAACT",3,59.91,10.26,-0.5,0.05,2.9,1.01,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","CAGCAAAACAAAAATG",4,0,NA,NA,NA,NA,NA,NA,"stop","L5S T15I V71W I104S Y143* Q168I",6
"lib1","SARS-CoV-2","CAGCAAAAGAATTAAG",1,11.55,8.46,-2.31,0.17,3,1.07,0.01,">1 nonsynonymous","Y35V A89S N118G",3
"lib1","SARS-CoV-2","CAGCAAACACAGCCTA",8,31.77,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V71P L187C",2
"lib1","SARS-CoV-2","CAGCAAACACCACATC",4,70.03,10.81,0.05,0.07,2.97,1.02,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","CAGCAAACCTAAGTCC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","E186* K198R",2
"lib1","SARS-CoV-2","CAGCAAACCTCCGTAA",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C I104G F134S",3
"lib1","SARS-CoV-2","CAGCAAACGGTAGATT",9,4.96,NA,NA,NA,NA,NA,NA,"stop","K56M E76* P82G A105S",4
"lib1","SARS-CoV-2","CAGCAAACTATGGTGA",4,62.51,10.75,-0.02,0.05,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCAAAGAATTTGCG",1,13.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3S F12L A67S Q144L T201L",5
"lib1","SARS-CoV-2","CAGCAAAGAGTCTCAG",2,88.51,9.71,-1.06,0.08,1.92,1.05,0,">1 nonsynonymous","N64L D90I",2
"lib1","SARS-CoV-2","CAGCAAAGCGTGAACC",3,85.37,9.8,-0.96,0.13,2.3,1.02,0.01,">1 nonsynonymous","C6S D34S",2
"lib1","SARS-CoV-2","CAGCAAAGGATGGCCT",3,13.44,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","K48C K87E N109Y N157V G174W T201R",6
"lib1","SARS-CoV-2","CAGCAAATCTTAGCCA",3,383.88,8.14,-2.63,0.11,2.53,1.1,0,">1 nonsynonymous","G152S N171D",2
"lib1","SARS-CoV-2","CAGCAAATGGAAACGT",2,3.03,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","CAGCAAATGGACCTCT",3,12.46,6.25,-4.51,0.55,1.5,1.16,0.02,">1 nonsynonymous","G83N P96E S139F",3
"lib1","SARS-CoV-2","CAGCAACAGGCCCTGC",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104S S139V P169I",3
"lib1","SARS-CoV-2","CAGCAACAGTCCTAAT",3,102.58,10.71,-0.05,0.09,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCAACATCTATTAG",1,47.57,10.66,-0.11,0.08,2.89,1.1,0,"1 nonsynonymous","T140L",1
"lib1","SARS-CoV-2","CAGCAACCACAACCTA",4,39.67,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9M Y50D T63Y Y121F F167I",5
"lib1","SARS-CoV-2","CAGCAACGGACTTAAA",2,64.21,8.42,-2.35,0.13,1.88,1.12,0.01,">1 nonsynonymous","F8P V37Q D90S G166S",4
"lib1","SARS-CoV-2","CAGCAACTTAAACATC",3,13.55,6,-4.76,2,3,1.06,0,">1 nonsynonymous","L60P I80Y K87N",3
"lib1","SARS-CoV-2","CAGCAAGCAACCCTAC",2,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F G86F K94N S147D",4
"lib1","SARS-CoV-2","CAGCAAGGAAAACCCG",4,0.35,NA,NA,NA,NA,NA,NA,"stop","F134M F156*",2
"lib1","SARS-CoV-2","CAGCAAGGGCCAAGCT",6,128.25,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36L Y121D G152V G174Q P197T",5
"lib1","SARS-CoV-2","CAGCAAGTCTCACATC",3,19.53,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3N G83A K94P",3
"lib1","SARS-CoV-2","CAGCAATAACCTAGCC",7,13.47,8.49,-2.28,0.37,1.5,1.04,0.05,">1 nonsynonymous","V11S K26F K132L E141Q P149S",5
"lib1","SARS-CoV-2","CAGCAATAATACCACT",6,31.42,8.3,-2.46,0.17,2.28,1.17,0.01,">1 nonsynonymous","A14C N157Q",2
"lib1","SARS-CoV-2","CAGCAATAATTCATTA",6,86.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64S D137N L162N",3
"lib1","SARS-CoV-2","CAGCAATAATTCTGTA",3,14.73,10.62,-0.15,0.05,2.9,1.04,0,"1 nonsynonymous","A22T",1
"lib1","SARS-CoV-2","CAGCAATATGCAATAT",3,42.03,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T46W C158F",2
"lib1","SARS-CoV-2","CAGCAATCAAGAACAA",3,10.19,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V37K C61G K114G Y175S",4
"lib1","SARS-CoV-2","CAGCAATCAAGGAAAG",2,21.07,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86S Y121T S147A",3
"lib1","SARS-CoV-2","CAGCAATCAGGCGCGT",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100F R127T E154S L188T",4
"lib1","SARS-CoV-2","CAGCAATCCCAGCTCG",4,20.39,6,-4.76,2,1.5,1.2,0.07,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","CAGCAATCTCAACCTC",2,0,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","CAGCAATCTTGTGATC",1,34.98,10.75,-0.02,0.09,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCAATTACAAAACT",2,10.83,7.34,-3.42,0.43,1.75,1.25,0.05,"1 nonsynonymous","D68E",1
"lib1","SARS-CoV-2","CAGCAATTACCTTCAA",2,109.16,8.48,-2.28,0.12,1.98,1.07,0.01,">1 nonsynonymous","G9L N118L F160A",3
"lib1","SARS-CoV-2","CAGCAATTAGTGTGCG",1,11.44,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","W23K S45W G155Q",3
"lib1","SARS-CoV-2","CAGCAATTATGTCTAC",2,18.31,6.24,-4.52,0.54,1.5,1.09,0.01,">1 nonsynonymous","P7E L38A N157T",3
"lib1","SARS-CoV-2","CAGCAATTCATTGATG",3,33.68,6,-4.76,2,1.54,1.12,0,">1 nonsynonymous","I2S F17C N30K N64Y G146N V173D",6
"lib1","SARS-CoV-2","CAGCAATTGTATCTAG",5,6.01,NA,NA,NA,NA,NA,NA,"stop","C6D V32L P54G W106*",4
"lib1","SARS-CoV-2","CAGCACAAGGTATCTT",1,27.65,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G51M V103C G174N",3
"lib1","SARS-CoV-2","CAGCACACCCTCGTGC",1,11.49,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19K P82K G146R",3
"lib1","SARS-CoV-2","CAGCACAGACGAGATA",9,94.34,10.81,0.04,0.07,2.87,1.06,0,">1 nonsynonymous","V37A S43Y",2
"lib1","SARS-CoV-2","CAGCACAGCGTGGATG",2,55.95,10.71,-0.05,0.08,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCACATAATACGTG",4,65.56,9.98,-0.78,0.08,2.54,1.02,0,">1 nonsynonymous","S36H Q144V V173F",3
"lib1","SARS-CoV-2","CAGCACATACTTGAAA",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F12S A81V T140N",4
"lib1","SARS-CoV-2","CAGCACATATTCTTGA",4,0.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103Q",1
"lib1","SARS-CoV-2","CAGCACATTACCGGAT",2,85.61,10.68,-0.09,0.07,2.87,1.05,0,"1 nonsynonymous","N24D",1
"lib1","SARS-CoV-2","CAGCACATTGTTAACT",1,41.82,9.33,-1.44,0.09,2.79,1.12,0,"1 nonsynonymous","G117R",1
"lib1","SARS-CoV-2","CAGCACATTTCTAACA",1,83.32,8.36,-2.4,0.15,2.66,1.09,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","CAGCACCAAAAACCCT",10,63.53,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I28R S43R P54Q K87L W106C P133Y",6
"lib1","SARS-CoV-2","CAGCACCAAAGAACTG",3,38.82,8.97,-1.79,0.19,1.71,1.17,0.01,">1 nonsynonymous","F12T L162M",2
"lib1","SARS-CoV-2","CAGCACCCCAAGGAGC",1,65.38,9.19,-1.57,0.23,1.5,1.14,0.02,">1 nonsynonymous","G51C L60W",2
"lib1","SARS-CoV-2","CAGCACCCGCATGAAA",6,9.4,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","A33V K56H F99T A105V",4
"lib1","SARS-CoV-2","CAGCACCGAGATTTAA",7,108.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9S Y50Q Y121N Y178L",4
"lib1","SARS-CoV-2","CAGCACCTTCCTTATG",3,17.06,6.12,-4.64,0.95,1.5,1.22,0.02,">1 nonsynonymous","D68E K114N Y123S",3
"lib1","SARS-CoV-2","CAGCACGACTAGGAAT",6,207.05,10.41,-0.36,0.04,2.87,1.03,0,">1 nonsynonymous","A42I D98K N171S",3
"lib1","SARS-CoV-2","CAGCACGCACATCCAA",3,39.06,10.42,-0.34,0.07,2.95,1,0,">1 nonsynonymous","L131I F156I",2
"lib1","SARS-CoV-2","CAGCACGGTACCTTTT",8,3.44,NA,NA,NA,NA,NA,NA,"stop","S19* D90E G117S C150F",4
"lib1","SARS-CoV-2","CAGCACTAAAACAGCA",7,149.98,6.85,-3.91,0.13,1.62,1.15,0,">1 nonsynonymous","S36R R73Q Y143T",3
"lib1","SARS-CoV-2","CAGCACTAGCGACCGT",7,1.35,NA,NA,NA,NA,NA,NA,"stop","G9F T15Y R127N F134*",4
"lib1","SARS-CoV-2","CAGCACTATCTACCAT",4,21.22,6.07,-4.69,1.11,1.5,1.16,0.03,">1 nonsynonymous","N4I K56T I88Y P96R A105E",5
"lib1","SARS-CoV-2","CAGCACTCGGAGGATA",3,19.94,9.25,-1.51,0.31,1.68,1.08,0.04,"1 nonsynonymous","S19W",1
"lib1","SARS-CoV-2","CAGCACTCTACCACTT",4,86.78,9.7,-1.06,0.1,1.99,1.06,0,">1 nonsynonymous","C61P Y123T K128D",3
"lib1","SARS-CoV-2","CAGCACTGGAAGACTG",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81D D98M",2
"lib1","SARS-CoV-2","CAGCACTTACATTAAA",4,70.52,10.67,-0.1,0.05,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCACTTTGGACTTA",2,91.21,10.7,-0.06,0.07,2.94,1.05,0,"1 nonsynonymous","N151K",1
"lib1","SARS-CoV-2","CAGCACTTTTGTAGTG",1,36.78,7.36,-3.4,0.25,2.11,1.11,0.03,">1 nonsynonymous","D98H K114A Y175L",3
"lib1","SARS-CoV-2","CAGCAGAACCGTGTCT",3,20.21,6.33,-4.44,1.09,1.5,1.26,0.05,">1 nonsynonymous","L60M G86N Y121D I138V",4
"lib1","SARS-CoV-2","CAGCAGAAGATTACAA",5,4.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","CAGCAGAAGATTATGC",2,8.98,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","G9S F47Y N107I E135T K198Y",5
"lib1","SARS-CoV-2","CAGCAGAATGACCAAG",4,0.53,NA,NA,NA,NA,NA,NA,"stop","S45D T55G P149L K198*",4
"lib1","SARS-CoV-2","CAGCAGACAATTTCTC",1,21.2,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T15D G86I K128I F160L",4
"lib1","SARS-CoV-2","CAGCAGACATTGTTAG",1,14.3,10.58,-0.19,0.17,2.66,1.04,0.03,">1 nonsynonymous","K56F Q84T",2
"lib1","SARS-CoV-2","CAGCAGACCACGCGAA",3,29.32,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F99P A105D V115Q",3
"lib1","SARS-CoV-2","CAGCAGACGAAGGCAT",1,15.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C150I V181S",2
"lib1","SARS-CoV-2","CAGCAGAGGCTTCCCC",6,0.52,NA,NA,NA,NA,NA,NA,"stop","I72* Q163A",2
"lib1","SARS-CoV-2","CAGCAGAGGGAGCGTT",5,45.79,6,-4.76,2,3,1.21,0,">1 nonsynonymous","A67N K94T G174M",3
"lib1","SARS-CoV-2","CAGCAGATAATTCCAT",3,31.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35W G101V F134A Q144K C150E",5
"lib1","SARS-CoV-2","CAGCAGCATTTATGGA",1,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48E",1
"lib1","SARS-CoV-2","CAGCAGCCGTACGCGG",3,30.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D98L R127K E135V Q144S",4
"lib1","SARS-CoV-2","CAGCAGCCTGAAGTCC",1,8.41,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","C6A A89H D98A E141N",4
"lib1","SARS-CoV-2","CAGCAGCTACATACCA",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46F K198Q",2
"lib1","SARS-CoV-2","CAGCAGGCTATGTCAA",1,55.22,9.01,-1.75,0.06,2.9,1.07,0,"1 nonsynonymous","Y143E",1
"lib1","SARS-CoV-2","CAGCAGGTATCAACAG",1,55.38,10.47,-0.29,0.04,2.9,1,0,">1 nonsynonymous","K56S A89C",2
"lib1","SARS-CoV-2","CAGCAGTTATGTTTTA",3,31.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8H N64K G101H P133G",4
"lib1","SARS-CoV-2","CAGCATAAATTATCGT",5,79.18,6.47,-4.29,0.39,1.5,1.11,0.02,">1 nonsynonymous","W23L I28N V52A C61D",4
"lib1","SARS-CoV-2","CAGCATAACACAGCTT",2,18.77,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D59I P82K N107F",3
"lib1","SARS-CoV-2","CAGCATAACCAGGTAG",2,7.57,10.14,-0.63,0.19,2.83,1.1,0.02,">1 nonsynonymous","C6G K56E G83H",3
"lib1","SARS-CoV-2","CAGCATAATCTCCATA",2,5.08,6,-4.76,2,3,1.34,0.02,">1 nonsynonymous","N13L P54H A89L D97I E141L G152M Q168P",7
"lib1","SARS-CoV-2","CAGCATACCCACCCTA",4,25.12,7.98,-2.78,0.24,1.5,1,0.02,">1 nonsynonymous","S41A D112L F185Y",3
"lib1","SARS-CoV-2","CAGCATACTAAACGTT",3,53.53,10.31,-0.46,0.08,2.86,1,0,">1 nonsynonymous","T3A A14G",2
"lib1","SARS-CoV-2","CAGCATACTACAAGAA",2,34.8,10.71,-0.05,0.1,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCATATGAAGCACG",9,156.73,8.15,-2.62,0.18,1.5,1.15,0.01,">1 nonsynonymous","N40H Y66M D98E E141A L162V",5
"lib1","SARS-CoV-2","CAGCATATTGGGCCGG",1,10.15,7.21,-3.55,0.38,1.5,1,0.03,">1 nonsynonymous","A81P G152V",2
"lib1","SARS-CoV-2","CAGCATCAACGCTGAC",3,8.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A L125N E135S C158F A190V",5
"lib1","SARS-CoV-2","CAGCATCTAAATAACT",2,81.44,10.51,-0.25,0.06,2.85,1.07,0,">1 nonsynonymous","N1V K87A",2
"lib1","SARS-CoV-2","CAGCATGAAACACAAC",11,162.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K87G L95S Q176R",3
"lib1","SARS-CoV-2","CAGCATGAATAGCTAA",5,62.68,10.65,-0.12,0.04,2.94,1.02,0,"1 nonsynonymous","Y39C",1
"lib1","SARS-CoV-2","CAGCATGATTCTATCA",4,41.26,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","N40I V65W N107S I138P",4
"lib1","SARS-CoV-2","CAGCATGCAAATATCG",3,34.82,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T55N R124D N157Q",3
"lib1","SARS-CoV-2","CAGCATGGACCTAATC",4,27.94,8.55,-2.21,0.21,1.5,1.05,0.02,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","CAGCATGGACGATTGC",2,39.34,8.41,-2.36,0.31,1.5,1.13,0.03,">1 nonsynonymous","S45L Y119L I142L",3
"lib1","SARS-CoV-2","CAGCATGTACGCTGAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53C D90L F99G S147C P169L",5
"lib1","SARS-CoV-2","CAGCATGTTGATTTAC",1,44.39,8.71,-2.06,0.43,1.5,1,0.06,">1 nonsynonymous","K94R A105Y I138M Y178I",4
"lib1","SARS-CoV-2","CAGCATTAAAAAGTGA",4,72.32,8.35,-2.42,0.16,2.38,1.14,0.01,">1 nonsynonymous","K26L Y119E G155C T201D",4
"lib1","SARS-CoV-2","CAGCATTACAAATCAC",1,20.4,9.33,-1.43,0.21,1.78,1.07,0.04,">1 nonsynonymous","N4D S108I",2
"lib1","SARS-CoV-2","CAGCATTACTAAAGAT",2,15.8,9.72,-1.04,0.17,2.39,1.03,0.01,">1 nonsynonymous","C6L S43R E154V",3
"lib1","SARS-CoV-2","CAGCATTAGATCATAC",3,11.69,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","N1K V37N N64I N110K L162P R179M",6
"lib1","SARS-CoV-2","CAGCATTAGGTAATCG",4,95.06,10.73,-0.03,0.04,2.92,1.04,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","CAGCATTCAGACGCGA",5,3.04,NA,NA,NA,NA,NA,NA,"stop","F12T W106* N157T",3
"lib1","SARS-CoV-2","CAGCATTCAGATAAAA",3,61.66,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C6V Y165S",2
"lib1","SARS-CoV-2","CAGCATTCTGGGGGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97E G172Y T201I",3
"lib1","SARS-CoV-2","CAGCATTGAATGCAAG",3,32.38,8.82,-1.94,0.05,2.89,1.01,0,">1 nonsynonymous","Q144M Y159F G174L",3
"lib1","SARS-CoV-2","CAGCATTGCTTGAATT",2,26.95,10.75,-0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCATTGGTAATACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V D98Y",2
"lib1","SARS-CoV-2","CAGCATTTCACAGTAA",3,24.95,9.1,-1.66,0.31,1.5,1,0.08,">1 nonsynonymous","N13V N40S D90A",3
"lib1","SARS-CoV-2","CAGCCAAAAGTGATCC",3,28.88,6,-4.76,2,3,1.13,0,">1 nonsynonymous","D112Q F167H",2
"lib1","SARS-CoV-2","CAGCCAAACCTACACA",2,68.94,8.42,-2.35,0.15,1.98,1.1,0.01,">1 nonsynonymous","L57R G166R",2
"lib1","SARS-CoV-2","CAGCCAAAGGTTAAGG",2,52.55,10.72,-0.05,0.09,2.85,1.05,0,"1 nonsynonymous","T3W",1
"lib1","SARS-CoV-2","CAGCCAAATTTCACGG",6,32.48,9.35,-1.41,0.13,1.73,1.07,0.01,">1 nonsynonymous","F8E P169R",2
"lib1","SARS-CoV-2","CAGCCAAATTTGACCT",1,25.46,6.26,-4.5,0.95,1.5,1.38,0.04,">1 nonsynonymous","E10T T46P K199Q",3
"lib1","SARS-CoV-2","CAGCCAACACCAGACG",7,111.23,9.99,-0.77,0.1,2.45,1.04,0,">1 nonsynonymous","A14L I72L",2
"lib1","SARS-CoV-2","CAGCCAACATCGAACA",2,23.82,7.41,-3.36,0.31,1.5,1.06,0.04,">1 nonsynonymous","N13P K128F Y178W",3
"lib1","SARS-CoV-2","CAGCCAACGGGATGAA",4,22.12,10.76,0,0.09,2.87,1.09,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","CAGCCAACGTGAAACC",10,90.41,10.15,-0.62,0.06,2.76,1.02,0,">1 nonsynonymous","S29P F44T",2
"lib1","SARS-CoV-2","CAGCCAAGAAGCAAGT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L A14R Y50K K94F R127Q S200N",6
"lib1","SARS-CoV-2","CAGCCAAGACTAAGTT",3,238.49,10.53,-0.24,0.03,2.95,1.01,0,">1 nonsynonymous","T15G H189N",2
"lib1","SARS-CoV-2","CAGCCAAGATTGTCGC",2,50.12,10.32,-0.45,0.05,2.74,1.1,0,">1 nonsynonymous","Y39V V173S",2
"lib1","SARS-CoV-2","CAGCCAATACGCACAG",2,18.39,10.05,-0.71,0.09,2.86,1.03,0.01,">1 nonsynonymous","R27I C61K I104F P177A K198Q",5
"lib1","SARS-CoV-2","CAGCCAATATCATGAA",5,85.88,10.73,-0.03,0.06,2.92,1.06,0,">1 nonsynonymous","T46V C61S",2
"lib1","SARS-CoV-2","CAGCCACAACAAGCCC",2,8.21,10.92,0.16,0.12,2.91,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCCACACACTGAAA",2,6.8,10.67,-0.1,0.13,2.86,1.12,0,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","CAGCCAGAATGATCAT",1,10.64,8.64,-2.13,0.31,1.5,1.19,0.05,">1 nonsynonymous","V11D A42S K48R D90V",4
"lib1","SARS-CoV-2","CAGCCAGCCTAAGAGG",3,0.77,NA,NA,NA,NA,NA,NA,"stop","I138A Y175*",2
"lib1","SARS-CoV-2","CAGCCAGTTACCATAC",10,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T Y143L",2
"lib1","SARS-CoV-2","CAGCCATACAACGACA",1,1.14,NA,NA,NA,NA,NA,NA,"stop","A18F A33D N120Y Y178*",4
"lib1","SARS-CoV-2","CAGCCATTTCTACCCG",15,187.86,7.12,-3.65,0.25,1.5,1.15,0.01,">1 nonsynonymous","Y35S P161N",2
"lib1","SARS-CoV-2","CAGCCCACAAAAAGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","K94T Y123* E135R G155H N171T A190F",6
"lib1","SARS-CoV-2","CAGCCCACGATGAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","P177*",1
"lib1","SARS-CoV-2","CAGCCCACGCCACCTC",5,76.82,10.31,-0.45,0.05,2.89,1,0,">1 nonsynonymous","I138D L183F",2
"lib1","SARS-CoV-2","CAGCCCACGTTTGATT",10,5.22,NA,NA,NA,NA,NA,NA,"stop","I2M L111S K132* C158L Q176Y",5
"lib1","SARS-CoV-2","CAGCCCATACTACCAA",4,80.7,10.78,0.01,0.09,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGCCCCATGAAATAC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A89* S147I G152N R179S",4
"lib1","SARS-CoV-2","CAGCCCCGCTAAACCT",6,13.12,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F99V R136P L183Q",3
"lib1","SARS-CoV-2","CAGCCCGATATAAAAC",2,42.39,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","T46I T55K L95P",3
"lib1","SARS-CoV-2","CAGCCCGGCAAGCAAA",2,10.53,6.88,-3.88,0.5,1.5,1.01,0.04,">1 nonsynonymous","L5Q L60V Y93C",3
"lib1","SARS-CoV-2","CAGCCCTCGTGAAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37* K56L Y66S V71L T140P G155Y",6
"lib1","SARS-CoV-2","CAGCCGAACTTCAATA",3,18.94,8.97,-1.79,0.57,1.5,1,0.08,">1 nonsynonymous","K87V T140V V181W",3
"lib1","SARS-CoV-2","CAGCCGATTATATCAG",7,25.72,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P7E A14P F44T Y123G S139D G172V",6
"lib1","SARS-CoV-2","CAGCCGTAACCTACAC",2,50.83,7.76,-3.01,0.18,1.77,1.08,0.01,">1 nonsynonymous","G116Y Y175R",2
"lib1","SARS-CoV-2","CAGCCGTGACGCACTA",6,81.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36I K56I R73G C150D G155V",5
"lib1","SARS-CoV-2","CAGCCGTTACTGCCAT",7,47.53,8.12,-2.65,0.22,1.5,1.18,0.02,">1 nonsynonymous","K94V E141F",2
"lib1","SARS-CoV-2","CAGCCTACGTAGCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60S S147*",2
"lib1","SARS-CoV-2","CAGCCTATCAAGTTTG",16,186.04,10.63,-0.13,0.04,2.93,1.01,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","CAGCCTCAAATAACTC",5,0.08,NA,NA,NA,NA,NA,NA,"stop","T55L Y123* P161D G174H",4
"lib1","SARS-CoV-2","CAGCCTCCTAGGGACC",2,13.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y66S G86A",2
"lib1","SARS-CoV-2","CAGCCTCTGACATCAT",5,5.59,NA,NA,NA,NA,NA,NA,"stop","G9* I28S F156T Q168G",4
"lib1","SARS-CoV-2","CAGCCTGCATTCACTA",3,70.51,10.85,0.09,0.08,2.87,1.07,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","CAGCCTGGGATAACGC",5,15.86,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D59N D68Q L95C L111C Q168L",5
"lib1","SARS-CoV-2","CAGCCTTAAAATGCAA",4,21.8,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33P E76I K87F L95T W106C",5
"lib1","SARS-CoV-2","CAGCCTTAAATCGTGC",4,118.23,10.69,-0.07,0.05,2.92,1.02,0,"1 nonsynonymous","A14K",1
"lib1","SARS-CoV-2","CAGCCTTCTTATATGC",6,40.1,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N40L G86I",2
"lib1","SARS-CoV-2","CAGCGAAAACAAACAC",2,8.51,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G51C Y123C C158T Y165S",4
"lib1","SARS-CoV-2","CAGCGAAACAGTATAA",5,62.73,8.47,-2.3,0.22,1.78,1.15,0.01,">1 nonsynonymous","L38M D90F F126R",3
"lib1","SARS-CoV-2","CAGCGAAACCGCCACG",3,20.3,10.77,0,0.04,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCGAACCACGGCTA",2,11.66,9.83,-0.94,0.22,2.76,1.12,0.01,">1 nonsynonymous","P54R S129D Y165H T201Y",4
"lib1","SARS-CoV-2","CAGCGAACGCGGCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15Y D68*",2
"lib1","SARS-CoV-2","CAGCGAATGCGTTCCC",1,30.58,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","K87T I88R D97M E154A",4
"lib1","SARS-CoV-2","CAGCGAATTATGTTAA",4,274.34,9.34,-1.42,0.1,1.74,1.1,0,">1 nonsynonymous","I2A A81F I138A T201N",4
"lib1","SARS-CoV-2","CAGCGACCATCTGAAA",2,30.68,6,-4.76,0.8,1.5,1.11,0.01,">1 nonsynonymous","G83R T100Q D112F",3
"lib1","SARS-CoV-2","CAGCGAGGGCTCAATG",5,33.9,10.02,-0.75,0.07,2.92,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","CAGCGAGGTACAGTTA",2,17.46,9.86,-0.91,0.12,2.65,1.05,0,">1 nonsynonymous","D34A P149Q",2
"lib1","SARS-CoV-2","CAGCGAGGTTAACATA",3,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P Y66S P96N W106Y",4
"lib1","SARS-CoV-2","CAGCGATAAATAAAAT",1,10.72,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N24W N107S D112L",3
"lib1","SARS-CoV-2","CAGCGATAGGCAGGTC",1,9.94,7.25,-3.51,0.36,1.5,1.14,0.04,">1 nonsynonymous","S53N Y91I P96N W106R",4
"lib1","SARS-CoV-2","CAGCGATGCACTCAAA",1,17.06,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F44I G117F S129F F167V P197L",5
"lib1","SARS-CoV-2","CAGCGATTAATTGGCA",3,46.11,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T85L Y123N G155C",3
"lib1","SARS-CoV-2","CAGCGATTTCACACCA",1,42.43,10.65,-0.12,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCGCAACTAAACGT",2,104.4,9.93,-0.83,0.05,2.37,1.06,0,">1 nonsynonymous","S19K V37E T201N",3
"lib1","SARS-CoV-2","CAGCGCAGAGTAAATC",4,0.07,NA,NA,NA,NA,NA,NA,"stop","F70T Y91* Y178*",3
"lib1","SARS-CoV-2","CAGCGCCACAAGAAGT",3,72.67,10.55,-0.22,0.04,2.89,1.03,0,">1 nonsynonymous","T140P V173Q",2
"lib1","SARS-CoV-2","CAGCGCCCTTCTAGAT",4,109.91,6,-4.76,2,1.94,1.16,0,">1 nonsynonymous","V65K V77I Q84Y R179D",4
"lib1","SARS-CoV-2","CAGCGCCGCGATGTCG",1,73.41,6,-4.76,1.72,1.5,1.16,0.01,">1 nonsynonymous","V37A F62I I142K P161E",4
"lib1","SARS-CoV-2","CAGCGCGAGATTACAG",1,11.61,6,-4.76,1.22,1.5,1.08,0.01,">1 nonsynonymous","N24S Y91P H189T",3
"lib1","SARS-CoV-2","CAGCGCGGTGAGTTAT",2,48.53,10.46,-0.3,0.07,2.75,1.09,0,">1 nonsynonymous","T85A A89T",2
"lib1","SARS-CoV-2","CAGCGGAAAAAAGCGC",1,12.89,8.61,-2.15,0.36,2.72,1.22,0.03,">1 nonsynonymous","Y66F R73P L125T",3
"lib1","SARS-CoV-2","CAGCGGAAAGGAAACA",4,14.98,9.97,-0.79,0.14,2.31,1,0.01,"1 nonsynonymous","C102V",1
"lib1","SARS-CoV-2","CAGCGGAGTGAATAAT",4,46.97,8.77,-2,0.36,1.5,1,0.06,">1 nonsynonymous","F70R P133R",2
"lib1","SARS-CoV-2","CAGCGGATTAAGCGCG",3,17.42,6.41,-4.36,0.33,3,1.09,0.01,">1 nonsynonymous","N1E F8R D137L",3
"lib1","SARS-CoV-2","CAGCGGATTTATGTGT",1,21.14,8.01,-2.75,0.16,2.45,1.08,0.01,"1 nonsynonymous","Y143K",1
"lib1","SARS-CoV-2","CAGCGGCAAGCTAAGC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","K87* Y121F F156C",3
"lib1","SARS-CoV-2","CAGCGGCAGGCATGCT",2,2.14,NA,NA,NA,NA,NA,NA,"stop","F12C F126K T140* Y175F",4
"lib1","SARS-CoV-2","CAGCGGCCAGAGGAAG",1,8.37,8.74,-2.03,0.31,1.5,1.23,0.05,">1 nonsynonymous","K48Q A105N",2
"lib1","SARS-CoV-2","CAGCGGCGGCAACCTG",5,15.72,7.36,-3.41,0.25,1.5,1.11,0.01,">1 nonsynonymous","I2G N64H A89L",3
"lib1","SARS-CoV-2","CAGCGGCGTTGTTGTA",4,24.3,10.63,-0.13,0.07,2.97,1.02,0,">1 nonsynonymous","C61Y Y123F S139G",3
"lib1","SARS-CoV-2","CAGCGGGATAAGACAC",3,23.71,6.93,-3.83,0.45,1.5,1.03,0.06,">1 nonsynonymous","G9R D59R W106G D137A G152L",5
"lib1","SARS-CoV-2","CAGCGGGCAAAAAAAA",3,67.84,7.14,-3.62,0.39,1.5,1.17,0.04,">1 nonsynonymous","Y91D S129V R136P",3
"lib1","SARS-CoV-2","CAGCGGGGCGTATTAA",5,18.65,10.27,-0.5,0.05,2.92,1.01,0,">1 nonsynonymous","N1V K94H K132A",3
"lib1","SARS-CoV-2","CAGCGGTCGACGATAT",5,99.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S S36L W106V I142L A192E",5
"lib1","SARS-CoV-2","CAGCGTAGCGAACGTT",6,58.2,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y66S V77R D90N R127V",4
"lib1","SARS-CoV-2","CAGCGTATCACCACTA",3,22.33,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","N4T Y50H F99G",3
"lib1","SARS-CoV-2","CAGCGTATTGAGAGGA",4,25.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10M V77W Y91P L131C",4
"lib1","SARS-CoV-2","CAGCGTGCATACACAA",6,53.58,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y21Q V37S N58S I88M S108H L187K",6
"lib1","SARS-CoV-2","CAGCGTTAACCAGCGT",3,85.77,10.17,-0.6,0.05,2.94,1.02,0,">1 nonsynonymous","T85M K87P G174N",3
"lib1","SARS-CoV-2","CAGCGTTAAGACTAAA",7,77.11,10.71,-0.06,0.07,2.94,1.02,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","CAGCTAAAATTCGGTA",7,209.55,10.63,-0.13,0.03,2.96,1,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","CAGCTAAATAAACTTA",2,19.44,10.26,-0.51,0.12,2.74,1,0.01,">1 nonsynonymous","T63E S129A E141Y S184N",4
"lib1","SARS-CoV-2","CAGCTAACAAGCTATG",3,6.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S F99C",2
"lib1","SARS-CoV-2","CAGCTAACAGCACCAA",8,1.57,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","CAGCTAACCAGTCACA",2,116.39,9.11,-1.65,0.06,2.77,1.1,0,">1 nonsynonymous","N1M G117K",2
"lib1","SARS-CoV-2","CAGCTAACCATATAGA",7,99.54,10.79,0.03,0.07,2.93,1.01,0,"1 nonsynonymous","S43I",1
"lib1","SARS-CoV-2","CAGCTAACGCTACATC",3,41.86,10.08,-0.68,0.06,2.86,1.02,0,">1 nonsynonymous","A33H A42D S43G T85A",4
"lib1","SARS-CoV-2","CAGCTAAGAACGCTCC",6,69.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R124F Y159W S164T",3
"lib1","SARS-CoV-2","CAGCTAAGTACACGTG",2,78.67,10.75,-0.01,0.07,2.97,1.01,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","CAGCTAATAATTTGGC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","G9* R25L Y39L P82W L95R S113* L162V",7
"lib1","SARS-CoV-2","CAGCTAATAGATACAT",6,33.05,7.06,-3.7,0.17,1.66,1.13,0.01,">1 nonsynonymous","Y35P F47C K114S N151P",4
"lib1","SARS-CoV-2","CAGCTACAAAGAACGA",5,0.26,NA,NA,NA,NA,NA,NA,"stop","I28L N157*",2
"lib1","SARS-CoV-2","CAGCTACACTGTCATT",1,27.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A42E D98M F160H Y175I",4
"lib1","SARS-CoV-2","CAGCTACATGATTATA",3,47.18,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14S T63V T85K I88S S113Q",5
"lib1","SARS-CoV-2","CAGCTACGCATGATAA",5,74.33,10.09,-0.68,0.08,2.58,1.03,0,">1 nonsynonymous","T55N P96H",2
"lib1","SARS-CoV-2","CAGCTACGGATCACAG",3,22.22,7.32,-3.45,0.37,1.5,1.06,0.04,">1 nonsynonymous","G51E C102I G155S N171C",4
"lib1","SARS-CoV-2","CAGCTACGGTACTCCG",4,13.94,9.78,-0.99,0.16,2.47,1,0.01,">1 nonsynonymous","A42F S53W Q79E D97N N151K",5
"lib1","SARS-CoV-2","CAGCTACTCATACTAA",1,37.62,10.74,-0.02,0.07,2.94,1.02,0,">1 nonsynonymous","C61S K199W",2
"lib1","SARS-CoV-2","CAGCTACTCATGGGTA",1,17.37,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V37L T46P F70R N92H N107H",5
"lib1","SARS-CoV-2","CAGCTAGACGTCAAGT",3,10.18,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","T15C T85M D90L N107R Y119C",5
"lib1","SARS-CoV-2","CAGCTAGATTACCGAC",3,19.92,8.47,-2.3,0.26,1.5,1.11,0.05,">1 nonsynonymous","V37F N58L P96F",3
"lib1","SARS-CoV-2","CAGCTATAAATGTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A14* V20M Y119Q",3
"lib1","SARS-CoV-2","CAGCTATATAATATGG",1,19.42,9.89,-0.87,0.11,2.15,1.06,0.01,"1 nonsynonymous","A14P",1
"lib1","SARS-CoV-2","CAGCTATATTGGATAT",3,71.77,10.66,-0.1,0.05,2.84,1.09,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","CAGCTATCGTCCTCGT",5,18.66,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","K87R N92T N110I",3
"lib1","SARS-CoV-2","CAGCTCACAAGTTGTA",4,23.93,9.55,-1.22,0.12,2.29,1.11,0.01,">1 nonsynonymous","S41Y S139V P169T",3
"lib1","SARS-CoV-2","CAGCTCAGCCTATTAC",2,59.69,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8H S36E S108P N157D",4
"lib1","SARS-CoV-2","CAGCTCCGTGCACTAC",3,162.52,9.46,-1.31,0.07,2.75,1.06,0,"1 nonsynonymous","G74R",1
"lib1","SARS-CoV-2","CAGCTCCTGTCTCAGT",2,32.82,10.05,-0.71,0.12,2.14,1.01,0.01,">1 nonsynonymous","S129G V181M T201G",3
"lib1","SARS-CoV-2","CAGCTCGCGCCTATTA",6,0.94,NA,NA,NA,NA,NA,NA,"stop","N4* F47K",2
"lib1","SARS-CoV-2","CAGCTCTCAAAATAAG",3,1.41,NA,NA,NA,NA,NA,NA,"stop","P7* A14V",2
"lib1","SARS-CoV-2","CAGCTCTCTTCCCCGT",4,107.58,6,-4.76,1.75,1.5,1.2,0.02,">1 nonsynonymous","F62L L131S E141F",3
"lib1","SARS-CoV-2","CAGCTCTTAACTCTCT",1,10.77,10.14,-0.63,0.17,2.51,1.07,0.02,">1 nonsynonymous","Y35L Y50N T85H",3
"lib1","SARS-CoV-2","CAGCTGAAAGGCCCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34* N109G",2
"lib1","SARS-CoV-2","CAGCTGAGCATGTATA",11,114.83,10.82,0.05,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTGATTACATACC",1,30.86,10.35,-0.42,0.09,3,1,0,">1 nonsynonymous","G51H C195R",2
"lib1","SARS-CoV-2","CAGCTGATTATGTATA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","T55Y A81P Y119R L125*",4
"lib1","SARS-CoV-2","CAGCTGGAGACATGAT",6,118.14,10.18,-0.59,0.07,2.65,1.06,0,">1 nonsynonymous","V37P Y91H",2
"lib1","SARS-CoV-2","CAGCTGGTATAAACAA",4,69.18,10.73,-0.04,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTGTAACGCTTGA",2,6.85,10.48,-0.29,0.12,3,1,0.01,">1 nonsynonymous","V11L A33M D90S A192R",4
"lib1","SARS-CoV-2","CAGCTGTATTTATCAA",6,182.5,10.66,-0.11,0.04,2.9,1.02,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","CAGCTGTCAAAAAATT",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129Y Q144H L183D",3
"lib1","SARS-CoV-2","CAGCTGTCTTAGCACT",2,5.65,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G86T D98I C102R",3
"lib1","SARS-CoV-2","CAGCTGTTATAAACGC",4,102.78,10.71,-0.05,0.06,2.82,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTGTTTAGGCTCA",1,7.44,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","A14L L60T E76G F99Y R127S T148N G166P",7
"lib1","SARS-CoV-2","CAGCTTAACGGAAACT",12,146.03,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","D112G F167A",2
"lib1","SARS-CoV-2","CAGCTTAAGCTAAACA",2,30.53,10.82,0.05,0.04,2.92,1.04,0,"1 nonsynonymous","L187R",1
"lib1","SARS-CoV-2","CAGCTTAATGCATATA",4,137.56,10.8,0.03,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTTAATTACAACA",7,12.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L R136P",2
"lib1","SARS-CoV-2","CAGCTTACAAGCATTA",2,118.08,10.48,-0.28,0.04,2.9,1.04,0,">1 nonsynonymous","N130S Q168R",2
"lib1","SARS-CoV-2","CAGCTTACAATAGTAA",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F P54S K87T",3
"lib1","SARS-CoV-2","CAGCTTACCAATGAAA",2,22.19,10.74,-0.02,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTTAGAAAAGTAA",1,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93A N107T Y119R",3
"lib1","SARS-CoV-2","CAGCTTAGACGACTCT",5,148.87,9.73,-1.04,0.12,2.29,1.06,0.01,">1 nonsynonymous","G9S F44G N107R",3
"lib1","SARS-CoV-2","CAGCTTAGCCAACAAT",6,24.6,6.45,-4.32,0.57,1.5,1.2,0.03,">1 nonsynonymous","D34F D90R G116S N130K",4
"lib1","SARS-CoV-2","CAGCTTATGTTAAGGC",2,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S Y39H I104N",3
"lib1","SARS-CoV-2","CAGCTTATGTTCCTTA",2,23.18,10.85,0.08,0.06,2.89,1.06,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","CAGCTTCACTTTCTCG",2,74.73,6.27,-4.5,0.47,1.5,1.19,0.01,">1 nonsynonymous","A67L E154Q Q168P H189S",4
"lib1","SARS-CoV-2","CAGCTTCCTAACTAGT",1,6.82,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","V11F P82Y N118F",3
"lib1","SARS-CoV-2","CAGCTTCGCATGCCAT",7,42.95,6,-4.76,1.47,1.5,1.13,0.01,"1 nonsynonymous","F70H",1
"lib1","SARS-CoV-2","CAGCTTGCAATGATGA",4,75.21,10.22,-0.54,0.09,2.51,1,0,">1 nonsynonymous","G51P C61I L122A Q168Y",4
"lib1","SARS-CoV-2","CAGCTTGGTGAATTTA",3,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T G86R N107E F126L",4
"lib1","SARS-CoV-2","CAGCTTGGTTACGACA",1,26.42,10.54,-0.22,0.09,2.94,1.01,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","CAGCTTTAAACCCTAC",6,96.09,9.1,-1.66,0.1,2.44,1.15,0,">1 nonsynonymous","D112L S200Y",2
"lib1","SARS-CoV-2","CAGCTTTAGCAAACCA",8,150.42,6,-4.76,1.14,1.5,1.19,0.02,">1 nonsynonymous","V37K S45Y V52L R73E T148V E154T",6
"lib1","SARS-CoV-2","CAGCTTTATTTAAAAA",2,36.02,9.91,-0.85,0.06,2.92,1.04,0,"1 nonsynonymous","N171G",1
"lib1","SARS-CoV-2","CAGCTTTCAAGCACAA",1,18.7,6,-4.76,2,3,1.24,0.04,">1 nonsynonymous","F8L F47E L95W T100S P149R",5
"lib1","SARS-CoV-2","CAGCTTTCTACCGTTA",1,52.17,10.86,0.1,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTTTGAACCAGAA",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M N13S D34Y K48E C49M S184F",6
"lib1","SARS-CoV-2","CAGCTTTTATACAAAT",2,17.86,10.78,0.01,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGCTTTTATTAAGAC",2,10.86,9.82,-0.94,0.14,2.73,1.1,0.01,">1 nonsynonymous","N64E K87L A105M T148H P197Q",5
"lib1","SARS-CoV-2","CAGCTTTTCAATATAA",1,34.01,9.88,-0.88,0.11,2.43,1.01,0,">1 nonsynonymous","F62R T85E",2
"lib1","SARS-CoV-2","CAGGAAAAACACTTAT",2,7.86,10.29,-0.47,0.12,2.92,1.1,0,">1 nonsynonymous","I28L F44S",2
"lib1","SARS-CoV-2","CAGGAAAATTGTCTCA",3,27.98,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R25L L122C",2
"lib1","SARS-CoV-2","CAGGAAACGCGACATT",1,2.15,NA,NA,NA,NA,NA,NA,"stop","T55V P82T P96*",3
"lib1","SARS-CoV-2","CAGGAACAAATCAACA",8,81.43,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L60R D90Y W106L R136K S147R C158L Y175L S200C",8
"lib1","SARS-CoV-2","CAGGAACAATCAAAGT",3,27.87,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","V11H L60P Y119T G155T G196R",5
"lib1","SARS-CoV-2","CAGGAACGGATGGTTC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","T15W D34P F44R N64F P133*",5
"lib1","SARS-CoV-2","CAGGAAGTGGTATGGT",4,47.86,7.07,-3.69,0.41,1.5,1.14,0.04,">1 nonsynonymous","E10I G146F S184L",3
"lib1","SARS-CoV-2","CAGGAATAACAACAGA",5,63.92,6.51,-4.25,0.48,1.5,1.18,0.02,">1 nonsynonymous","F8Y A81R G86A",3
"lib1","SARS-CoV-2","CAGGAATATTAAGTCC",1,15.17,9.98,-0.78,0.14,2.91,1,0.01,">1 nonsynonymous","L5F C6N",2
"lib1","SARS-CoV-2","CAGGAATCCTACAGCT",5,80.93,8.23,-2.53,0.26,1.5,1.06,0.03,">1 nonsynonymous","V32L S41A A105M I138H",4
"lib1","SARS-CoV-2","CAGGAATGACCATCTA",1,8.04,7.29,-3.47,0.47,1.79,1.01,0.05,">1 nonsynonymous","C6V S45F C61V Y91T",4
"lib1","SARS-CoV-2","CAGGAATTATAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7G W23* R78I F126P Y159G Q176S",6
"lib1","SARS-CoV-2","CAGGACAAAGCGACTT",6,0.45,NA,NA,NA,NA,NA,NA,"stop","C61P D97*",2
"lib1","SARS-CoV-2","CAGGACAACTAACCTA",3,41.87,6.26,-4.51,0.77,1.5,1.19,0.02,">1 nonsynonymous","S43M Y165L V173Q Y178Q",4
"lib1","SARS-CoV-2","CAGGACAAGGAAGAGG",3,21.54,8.1,-2.67,0.39,1.5,1.05,0.07,">1 nonsynonymous","R127C K128R",2
"lib1","SARS-CoV-2","CAGGACAAGGTTTGAC",1,5.27,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","G86E V103S G116Y P161D",4
"lib1","SARS-CoV-2","CAGGACACAATATTAT",3,19.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93W D112P Y121T",3
"lib1","SARS-CoV-2","CAGGACACCCCGGGCA",5,61.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I28Q A33N L57S",3
"lib1","SARS-CoV-2","CAGGACACCCTATTCC",3,55.82,9.02,-1.75,0.06,2.74,1.16,0,">1 nonsynonymous","F44N Y121L A190T S200P",4
"lib1","SARS-CoV-2","CAGGACAGCACTAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","F62E W106G T201*",3
"lib1","SARS-CoV-2","CAGGACATGTGCACGT",11,105.04,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K87T G101L G116L Y165S L183I",5
"lib1","SARS-CoV-2","CAGGACATTTAAGGCG",8,60.02,10.72,-0.04,0.06,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGACCATACGAGAA",6,75.54,6.92,-3.84,0.23,1.51,1.16,0.01,">1 nonsynonymous","R27E Y175I",2
"lib1","SARS-CoV-2","CAGGACCCAACGCGGA",2,17.38,7.33,-3.44,0.39,1.5,1.18,0.05,">1 nonsynonymous","S41L K87W Y143S L188N",4
"lib1","SARS-CoV-2","CAGGACCCTTTCAAAG",4,114.18,7.88,-2.88,0.2,1.5,1.14,0.01,">1 nonsynonymous","Y35M Q79R D98E K114T F156E",5
"lib1","SARS-CoV-2","CAGGACCGCACCAATA",1,57.53,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y39I F70M N92C P161D",4
"lib1","SARS-CoV-2","CAGGACGACCTGGTAG",3,41.16,8.82,-1.94,0.31,1.5,1.06,0.03,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","CAGGACGATTACTGCA",2,10.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36T Y50S Q144A",3
"lib1","SARS-CoV-2","CAGGACGCAGGACGCG",3,0.13,NA,NA,NA,NA,NA,NA,"stop","D98* Y119I",2
"lib1","SARS-CoV-2","CAGGACGGACATTAAA",3,10.25,10.1,-0.66,0.12,2.73,1.13,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CAGGACGTAACGGATG",6,15.41,6.09,-4.68,1.1,1.5,1.24,0.03,">1 nonsynonymous","R73W Q144N S200T",3
"lib1","SARS-CoV-2","CAGGACTAGAGTGTCG",1,49.96,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A81N S129I F167V",3
"lib1","SARS-CoV-2","CAGGACTATTACCTGG",2,38.03,10.58,-0.18,0.06,3,1,0,"1 nonsynonymous","N58R",1
"lib1","SARS-CoV-2","CAGGACTCAAAATCAA",2,76.58,10.71,-0.05,0.05,2.92,1.03,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","CAGGACTTACGAATCC",3,37.04,9.77,-0.99,0.09,1.99,1.1,0,">1 nonsynonymous","S43L L162R",2
"lib1","SARS-CoV-2","CAGGACTTTAAATTTA",7,169.21,9.81,-0.95,0.08,2.53,1.07,0,">1 nonsynonymous","C6R T201M",2
"lib1","SARS-CoV-2","CAGGAGAATAAAGTAG",2,19.7,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","CAGGAGAGAACAATTA",5,44.69,10.76,-0.01,0.07,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGAGATAACTGTCT",1,41.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50L R73F D90V Y178V",4
"lib1","SARS-CoV-2","CAGGAGCAACAATTCG",1,10.37,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","V20P D68N N120A R127W",4
"lib1","SARS-CoV-2","CAGGAGCACCAATCCC",1,362.16,10.09,-0.68,0.05,2.76,1,0,">1 nonsynonymous","F44L N64F P149L",3
"lib1","SARS-CoV-2","CAGGAGCCTGTACCGG",2,34.49,8.82,-1.95,0.13,2.74,1.2,0.01,">1 nonsynonymous","K56T K87D F156Y",3
"lib1","SARS-CoV-2","CAGGAGCGAAGGTGAG",4,65.1,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G83S L95R Q168R",3
"lib1","SARS-CoV-2","CAGGAGCTCTCTATAA",3,58.43,10.81,0.04,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGAGGAATTGAGAC",5,79.66,10.78,0.01,0.06,2.88,1.06,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CAGGAGGGATATGGCG",5,32.3,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","D68S Y91L T100S",3
"lib1","SARS-CoV-2","CAGGAGGTATCAAAGG",18,2.25,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib1","SARS-CoV-2","CAGGAGGTTAATCCAA",1,52.57,8.53,-2.23,0.09,2.84,1.03,0.01,">1 nonsynonymous","P54R Y175M",2
"lib1","SARS-CoV-2","CAGGAGTACCGAATTA",3,94.64,10.65,-0.12,0.04,2.95,1.02,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","CAGGAGTATAAGAAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","S43T C61* K94G F167T T201A",5
"lib1","SARS-CoV-2","CAGGAGTATGCACACT",1,26.4,9.15,-1.62,0.37,1.5,1.04,0.07,">1 nonsynonymous","Y35N K56Q A105G K128L",4
"lib1","SARS-CoV-2","CAGGAGTCAGATAATA",2,14.54,6.06,-4.71,1.2,1.5,1.1,0.03,">1 nonsynonymous","G9T G86W F160S",3
"lib1","SARS-CoV-2","CAGGAGTCCGCTATCC",7,0.18,NA,NA,NA,NA,NA,NA,"stop","T85* G117E",2
"lib1","SARS-CoV-2","CAGGAGTCCTTTACTA",5,17.5,6.05,-4.72,1.65,1.5,1.25,0.05,">1 nonsynonymous","L5R D98M S129K F134S F160T P169F",6
"lib1","SARS-CoV-2","CAGGATAAAAGGATTA",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A A42S",2
"lib1","SARS-CoV-2","CAGGATACTTCTACAC",3,44.58,10.3,-0.46,0.05,2.85,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGATAGATCCCTCT",3,167.3,7.1,-3.66,0.21,1.5,1.11,0.01,">1 nonsynonymous","K56V S113M Y119V",3
"lib1","SARS-CoV-2","CAGGATAGCAGATACG",8,99.04,6.53,-4.23,0.44,1.5,1.2,0.02,">1 nonsynonymous","E10L Y35L P54N F62Y L111S N118H",6
"lib1","SARS-CoV-2","CAGGATAGGTGGATTA",2,72.37,10.17,-0.6,0.07,2.74,1.02,0,">1 nonsynonymous","D98I S129Y",2
"lib1","SARS-CoV-2","CAGGATCACTATACTG",2,24.53,7.84,-2.92,0.26,1.5,1.14,0.03,"1 nonsynonymous","I28P",1
"lib1","SARS-CoV-2","CAGGATCAGCACGTCA",10,185.76,9.12,-1.65,0.06,2.8,1.1,0,">1 nonsynonymous","G9W G146E",2
"lib1","SARS-CoV-2","CAGGATCCCGAGTATA",1,23.61,8.37,-2.39,0.12,2.92,1.1,0.01,"1 nonsynonymous","N171D",1
"lib1","SARS-CoV-2","CAGGATCTCGAAACTG",5,114.72,10.4,-0.37,0.04,2.87,1.03,0,">1 nonsynonymous","K87L K132M",2
"lib1","SARS-CoV-2","CAGGATGAACTCACTG",4,29.32,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A42E I88M S139A R179W V182M",5
"lib1","SARS-CoV-2","CAGGATGCATAGCCGG",1,130.29,8.87,-1.89,0.1,2.45,1.13,0,">1 nonsynonymous","N107S N118S",2
"lib1","SARS-CoV-2","CAGGATGCGCTAGCGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V Y91S T140A",3
"lib1","SARS-CoV-2","CAGGATGTGCCGCTTG",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F F99Y",2
"lib1","SARS-CoV-2","CAGGATTAACCAAACG",4,2.72,NA,NA,NA,NA,NA,NA,"stop","G9* D59E K87M",3
"lib1","SARS-CoV-2","CAGGATTACATACGAG",4,2,NA,NA,NA,NA,NA,NA,"stop","Y39Q S69*",2
"lib1","SARS-CoV-2","CAGGATTACCAGCCTA",4,57.27,8.56,-2.2,0.28,1.5,1.18,0.02,">1 nonsynonymous","F17K N58A T201L",3
"lib1","SARS-CoV-2","CAGGATTACTTGATGA",3,43.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35D K87R N118S P161R",4
"lib1","SARS-CoV-2","CAGGATTAGCTTTAGT",5,36.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50P P96N N120H",3
"lib1","SARS-CoV-2","CAGGATTATCTATAAT",4,31.08,8.98,-1.78,0.12,2.58,1.14,0.01,">1 nonsynonymous","T63L G117R",2
"lib1","SARS-CoV-2","CAGGATTCAAACCCGG",1,8.28,6,-4.76,2,3,1.19,0,">1 nonsynonymous","K26R N64T L95A G152I",4
"lib1","SARS-CoV-2","CAGGATTTACTTTGGA",3,6.61,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","I88K T140V",2
"lib1","SARS-CoV-2","CAGGCAAAATACGCGG",4,52.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D75S",2
"lib1","SARS-CoV-2","CAGGCAAACATGGGGT",1,13.12,10.59,-0.18,0.07,2.94,1.01,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CAGGCAAACCTGACCT",1,49.12,10.74,-0.02,0.06,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGCAAAGATGTAAA",1,6.8,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","W23A V32S R73S S139L",4
"lib1","SARS-CoV-2","CAGGCAAATACACAAA",1,38.38,10.57,-0.2,0.06,2.92,1.02,0,">1 nonsynonymous","V77L Y121F",2
"lib1","SARS-CoV-2","CAGGCAACAAACTAAG",1,28.77,10.83,0.07,0.08,2.93,1.06,0,">1 nonsynonymous","V37I D97H K198G",3
"lib1","SARS-CoV-2","CAGGCAACCCGTATAT",2,10.98,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","G51C T100N W106S N120W V153W",5
"lib1","SARS-CoV-2","CAGGCAACGAAGCAAG",2,28.3,9.05,-1.71,0.19,1.71,1.13,0.01,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","CAGGCAACTAGCGCCC",7,77.85,10.8,0.04,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGCAAGAACAATAT",6,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54V I104T V180A K198Y",4
"lib1","SARS-CoV-2","CAGGCACAAAAAATTG",4,33.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82E",1
"lib1","SARS-CoV-2","CAGGCACAGACTAGTA",4,138.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R25Y A67N A81H Y91Q N107G",5
"lib1","SARS-CoV-2","CAGGCACATGTGGCTA",8,93,10.63,-0.13,0.08,2.91,1.05,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","CAGGCACCAATAGACA",7,2.53,NA,NA,NA,NA,NA,NA,"stop","P82R G116*",2
"lib1","SARS-CoV-2","CAGGCACCCTAGGAAT",1,14.59,10.36,-0.41,0.14,2.47,1,0.02,"1 nonsynonymous","A18L",1
"lib1","SARS-CoV-2","CAGGCACGATTGAAAG",3,89.23,10.64,-0.12,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGCACGCTGCTACT",2,8.85,8.35,-2.42,0.48,1.57,1.26,0.04,">1 nonsynonymous","C6L K94N",2
"lib1","SARS-CoV-2","CAGGCACTCATACGAT",15,104.47,8.89,-1.87,0.16,1.62,1.17,0.01,">1 nonsynonymous","Q84P D97I",2
"lib1","SARS-CoV-2","CAGGCACTGAAATTAA",4,35.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62R N107F",2
"lib1","SARS-CoV-2","CAGGCAGAAACAACCA",2,24.25,10.6,-0.17,0.05,2.9,1.04,0,">1 nonsynonymous","G51Q N151Q",2
"lib1","SARS-CoV-2","CAGGCAGATCCCTCCG",2,6.08,9.04,-1.73,0.42,1.5,1,0.05,">1 nonsynonymous","A89T L125I Y178R",3
"lib1","SARS-CoV-2","CAGGCATGACCCATGC",12,137.93,8.98,-1.78,0.19,1.5,1.12,0.01,">1 nonsynonymous","R25N N151Y",2
"lib1","SARS-CoV-2","CAGGCATTACTTGGCT",4,36.1,10.68,-0.08,0.04,2.87,1.1,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","CAGGCCACCTACGCAT",8,149.89,10.15,-0.62,0.08,2.68,1.01,0,">1 nonsynonymous","N58D G83I F160Y",3
"lib1","SARS-CoV-2","CAGGCCACGAGGAAAT",2,14.85,10.58,-0.18,0.07,2.79,1.13,0,">1 nonsynonymous","T3H F8L R16T",3
"lib1","SARS-CoV-2","CAGGCCAGAAACACTT",3,42.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28T Q84L N110E I142V Q168V T193Y V194G",7
"lib1","SARS-CoV-2","CAGGCCCCAAGAAATA",7,68.8,10.24,-0.52,0.07,2.88,1.01,0,">1 nonsynonymous","I2V Y39S N120C",3
"lib1","SARS-CoV-2","CAGGCCCCAGGCACAG",5,40.45,10.83,0.07,0.06,2.94,1.02,0,">1 nonsynonymous","T100F A190G T201V",3
"lib1","SARS-CoV-2","CAGGCCCTAGAGAGCA",6,0.92,NA,NA,NA,NA,NA,NA,"stop","L5T P149* Y178H",3
"lib1","SARS-CoV-2","CAGGCCTCACGAAACA",2,7.6,6.03,-4.74,2,3,1.08,0,">1 nonsynonymous","Y35L I88H G117A E135A",4
"lib1","SARS-CoV-2","CAGGCCTTAAGATAAA",1,13.62,10.33,-0.44,0.09,2.83,1.08,0.01,">1 nonsynonymous","I2Y Y35T G146S",3
"lib1","SARS-CoV-2","CAGGCGAAGGAAAAAA",9,40.54,6,-4.76,2,1.5,1.35,0.06,">1 nonsynonymous","F99D Y123V",2
"lib1","SARS-CoV-2","CAGGCGCATATTAGAC",10,393.39,8.57,-2.2,0.19,1.5,1.15,0.01,">1 nonsynonymous","C102I N120V G152L",3
"lib1","SARS-CoV-2","CAGGCGCTGAACCTAA",6,26.25,6,-4.76,0.64,3,1.13,0,">1 nonsynonymous","V20Y S129R Q144L",3
"lib1","SARS-CoV-2","CAGGCGGAGCAAATCA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","S41* D98H A105S L122M F160L",5
"lib1","SARS-CoV-2","CAGGCGGCTAAGAGAT",1,10.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9T I88K N107W S113M Y119M",5
"lib1","SARS-CoV-2","CAGGCGGTACAGTCAT",7,140.65,10.52,-0.25,0.05,2.92,1.03,0,">1 nonsynonymous","P7M N151K",2
"lib1","SARS-CoV-2","CAGGCGGTCCAGGCAT",7,195.94,10.03,-0.73,0.03,2.75,1.02,0,">1 nonsynonymous","I2S T55L N107R",3
"lib1","SARS-CoV-2","CAGGCGTACTCCGCGA",8,83.01,10.18,-0.59,0.06,2.7,1.03,0,">1 nonsynonymous","F44R S147W",2
"lib1","SARS-CoV-2","CAGGCTAAATGAAAAA",2,34.3,9.16,-1.6,0.07,2.91,1.03,0,">1 nonsynonymous","S41A T170L",2
"lib1","SARS-CoV-2","CAGGCTAACGACATAG",5,73.42,10.7,-0.06,0.08,2.9,1.05,0,"1 nonsynonymous","D59K",1
"lib1","SARS-CoV-2","CAGGCTAAGGTCCAGA",2,41.8,10.71,-0.05,0.08,2.84,1.11,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","CAGGCTACATACCACT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L S139L C158H",3
"lib1","SARS-CoV-2","CAGGCTACGCCTACAG",11,67.62,6.51,-4.26,0.45,1.5,1.1,0.02,"1 nonsynonymous","I72P",1
"lib1","SARS-CoV-2","CAGGCTAGAGGGATTA",1,44.68,10.74,-0.02,0.03,2.99,1.01,0,">1 nonsynonymous","F99W T201C",2
"lib1","SARS-CoV-2","CAGGCTAGATAAATCC",5,25.64,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9I C61M F70L G152S",4
"lib1","SARS-CoV-2","CAGGCTCAGGTTACCA",2,66.17,10.42,-0.34,0.05,2.95,1,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","CAGGCTCATATTGACG",1,14.32,10.6,-0.16,0.06,2.96,1.06,0,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","CAGGCTCTCACAACCG",7,0.39,NA,NA,NA,NA,NA,NA,"stop","R124* L131T Q144N A190R",4
"lib1","SARS-CoV-2","CAGGCTGAAAACCACT",8,170.67,10.74,-0.02,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGCTGACCTAAGGT",5,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84S G117D E154I",3
"lib1","SARS-CoV-2","CAGGCTGCATCACACA",2,71.7,8.76,-2,0.09,2.56,1.07,0,">1 nonsynonymous","D34N G117Y",2
"lib1","SARS-CoV-2","CAGGCTGTCATTACTT",1,29.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6I S19E N110I",3
"lib1","SARS-CoV-2","CAGGCTTAGAACTATG",5,16.22,8.21,-2.55,0.33,1.5,1.06,0.08,">1 nonsynonymous","G9P Y123G G152R G174A",4
"lib1","SARS-CoV-2","CAGGCTTAGGTACATA",4,60.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31F Y39L G74I",3
"lib1","SARS-CoV-2","CAGGCTTATGTCTATT",1,26.18,9.35,-1.41,0.07,2.93,1.07,0,">1 nonsynonymous","N30E T170R",2
"lib1","SARS-CoV-2","CAGGCTTCATAATGAC",1,2.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","CAGGCTTTCACCATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","G74C S108* Q168R",3
"lib1","SARS-CoV-2","CAGGCTTTCCGATCAG",8,71.1,10.79,0.03,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGCTTTGCAAACAT",3,31,7.68,-3.09,0.24,2.22,1.15,0.01,">1 nonsynonymous","G83H F126N F156L S184K",4
"lib1","SARS-CoV-2","CAGGCTTTTTTTGGTG",2,73.79,8.6,-2.16,0.11,2.34,1.11,0,">1 nonsynonymous","V20P Y35P F156T A190N",4
"lib1","SARS-CoV-2","CAGGGAAAACAACACC",5,21.64,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P96R F99L P169L",3
"lib1","SARS-CoV-2","CAGGGAAACTAACTAA",6,12.85,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6F T15V I80Y I142F N151R",5
"lib1","SARS-CoV-2","CAGGGAACACCAAGAT",2,17.05,10.78,0.01,0.09,2.83,1.12,0,">1 nonsynonymous","R16M V37S P197T",3
"lib1","SARS-CoV-2","CAGGGAACTAAAAACC",4,134.6,10.72,-0.04,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGGAACTTAAAACT",3,0.49,NA,NA,NA,NA,NA,NA,"stop","F156I S200*",2
"lib1","SARS-CoV-2","CAGGGAAGTCTTTCTG",2,115.3,10.1,-0.66,0.07,2.56,1.03,0,">1 nonsynonymous","N40R K132P E186Q",3
"lib1","SARS-CoV-2","CAGGGAATACCGATTC",12,82.11,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","V103N T140L",2
"lib1","SARS-CoV-2","CAGGGACAGCAGCTCC",3,75.54,10.77,0,0.06,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGGGACCATCCACTA",6,79.18,7.91,-2.86,0.14,1.64,1.08,0.01,"1 nonsynonymous","D112F",1
"lib1","SARS-CoV-2","CAGGGACTACACATAG",1,24.5,8.33,-2.43,0.29,1.5,1.12,0.04,">1 nonsynonymous","V11D S69E Y123L",3
"lib1","SARS-CoV-2","CAGGGAGACAATCTAG",1,9.66,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","W106E N120P",2
"lib1","SARS-CoV-2","CAGGGAGGGATTTAGT",12,219.5,10.73,-0.04,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGGAGGTTAACATT",1,24.54,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F17Q F99S Y165H G174A",4
"lib1","SARS-CoV-2","CAGGGATACAAACGTA",1,0.68,NA,NA,NA,NA,NA,NA,"stop","S36L S45I G83* N107M Y119T",5
"lib1","SARS-CoV-2","CAGGGCAAGAAATACT",2,40.43,6,-4.76,1.04,1.5,1.2,0.01,">1 nonsynonymous","S19M V37I R73Q L131E",4
"lib1","SARS-CoV-2","CAGGGCAATCCCCCAT",7,17.09,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N13P L125P E135P",3
"lib1","SARS-CoV-2","CAGGGCACAGAAGTGG",1,6.96,10.53,-0.23,0.2,2.67,1,0.01,">1 nonsynonymous","F8W N58K D90C",3
"lib1","SARS-CoV-2","CAGGGCATAGCGGATA",3,9.27,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","N24S D68V N107T S129W T140L P161G L187M",7
"lib1","SARS-CoV-2","CAGGGCATTTCCACAT",10,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I N120G",2
"lib1","SARS-CoV-2","CAGGGCCCCGGACAGC",1,0.66,NA,NA,NA,NA,NA,NA,"stop","C61D Y91*",2
"lib1","SARS-CoV-2","CAGGGCCCTTATAAGC",3,9.23,10.24,-0.52,0.27,2.57,1.01,0.02,">1 nonsynonymous","A14S A89S",2
"lib1","SARS-CoV-2","CAGGGCTACCACGTAA",5,23.08,10.86,0.1,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGGGAAAAAGAACA",2,39.65,8.31,-2.45,0.16,2.14,1.08,0.01,">1 nonsynonymous","T3M L5H F44T L60T K87W F156S",6
"lib1","SARS-CoV-2","CAGGGGAACAATGTAT",2,96.35,10.27,-0.5,0.05,2.85,1.04,0,">1 nonsynonymous","D98V G116N",2
"lib1","SARS-CoV-2","CAGGGGAATAAAATTG",1,6.77,9.89,-0.87,0.26,2.11,1,0.02,">1 nonsynonymous","E10H E141G Q144R",3
"lib1","SARS-CoV-2","CAGGGGATTAAATGCC",2,9.69,7.47,-3.29,0.49,1.5,1,0.07,">1 nonsynonymous","L95R N120Y",2
"lib1","SARS-CoV-2","CAGGGGCTGGATTCGC",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G N107S",2
"lib1","SARS-CoV-2","CAGGGGGAGTAATGAA",8,0.78,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","CAGGGGGCTTTCGTAC",2,51.26,9.17,-1.6,0.18,1.5,1.16,0.02,">1 nonsynonymous","W106R Y178S",2
"lib1","SARS-CoV-2","CAGGGGTACTCGTCAA",2,23.19,8.17,-2.6,0.33,1.5,1.16,0.05,">1 nonsynonymous","N40M F44K T85D G174P",4
"lib1","SARS-CoV-2","CAGGGGTCAGCATTTT",1,25.3,10.19,-0.57,0.09,2.92,1,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","CAGGGGTTAGTCCCAC",4,58.01,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G86F L162S N171E",3
"lib1","SARS-CoV-2","CAGGGGTTCACTAGTG",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R D90Q",2
"lib1","SARS-CoV-2","CAGGGGTTTGCGATTG",2,16.49,10.33,-0.43,0.08,2.92,1,0,">1 nonsynonymous","L57I D97V N120R",3
"lib1","SARS-CoV-2","CAGGGTAGAGAAACAG",6,313.35,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S69A A81Y I104K Y119L N157I",5
"lib1","SARS-CoV-2","CAGGGTATTCTCTACT",10,4.63,NA,NA,NA,NA,NA,NA,"stop","G83R Y119T T140* Y175F",4
"lib1","SARS-CoV-2","CAGGGTCAGGTCTATA",1,21.73,10.4,-0.37,0.12,2.81,1,0.01,">1 nonsynonymous","T63Y P191L",2
"lib1","SARS-CoV-2","CAGGGTCTAAACGTGA",5,36.96,10.81,0.04,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGGTGCATAGCTCA",6,62.31,8.59,-2.18,0.22,1.55,1.24,0.02,"1 nonsynonymous","S19V",1
"lib1","SARS-CoV-2","CAGGGTGCCTAAGACC",1,12.31,10.76,0,0.1,3,1,0,">1 nonsynonymous","I2Y S139D",2
"lib1","SARS-CoV-2","CAGGGTTGAATGAAAT",2,40.03,10.42,-0.34,0.05,2.89,1.04,0,"1 nonsynonymous","L38Y",1
"lib1","SARS-CoV-2","CAGGGTTTACGACTAC",1,16.15,10.6,-0.17,0.08,2.95,1,0,">1 nonsynonymous","N24D L38V",2
"lib1","SARS-CoV-2","CAGGTAAAAATTGCTA",2,11.26,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","N64T I88G N92R L122K N151H",5
"lib1","SARS-CoV-2","CAGGTAAATAAATGGC",1,27.95,8.15,-2.61,0.12,2.64,1.05,0.01,">1 nonsynonymous","Q84M Y175V",2
"lib1","SARS-CoV-2","CAGGTAACATCGAGAA",1,8.93,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Y35R G86E L183P",3
"lib1","SARS-CoV-2","CAGGTAACCGAATCAA",7,45.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S19W Q84L W106C",3
"lib1","SARS-CoV-2","CAGGTAACGCAACATG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9A T15* Y91P K132Q",4
"lib1","SARS-CoV-2","CAGGTAAGAATAGAAG",8,183.55,9.28,-1.48,0.09,2.49,1.09,0,">1 nonsynonymous","E10H P169L V173A P197E",4
"lib1","SARS-CoV-2","CAGGTAATACATACCA",4,32.93,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","N40Q F47E C61I",3
"lib1","SARS-CoV-2","CAGGTAATAGTTAAAC",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S Y143L",2
"lib1","SARS-CoV-2","CAGGTAATGATTCACC",7,1.21,NA,NA,NA,NA,NA,NA,"stop","G86* Y119L",2
"lib1","SARS-CoV-2","CAGGTAATTCAACTTG",1,12.16,10.51,-0.25,0.14,2.67,1.31,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","CAGGTACAAAAGCGTA",5,33.05,7.93,-2.83,0.32,1.5,1.05,0.06,">1 nonsynonymous","V11I A14L G117R G152H",4
"lib1","SARS-CoV-2","CAGGTACAAGCTCGAA",3,24.99,9.36,-1.4,0.29,1.7,1.27,0.04,">1 nonsynonymous","S41L R124K",2
"lib1","SARS-CoV-2","CAGGTACACGCGAAAC",6,12.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12K G146N",2
"lib1","SARS-CoV-2","CAGGTACGAATGCATT",2,32.59,6.54,-4.22,0.3,1.5,1.08,0.01,">1 nonsynonymous","C6L V52F K114V G146L",4
"lib1","SARS-CoV-2","CAGGTACGAGACTATG",2,33.17,9.71,-1.05,0.08,2.8,1.09,0,"1 nonsynonymous","T170R",1
"lib1","SARS-CoV-2","CAGGTATATAACCGAT",6,165.05,9.2,-1.56,0.06,2.83,1.14,0,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","CAGGTATATAGCTTGG",1,15.05,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8S N107V E141R V173Q",4
"lib1","SARS-CoV-2","CAGGTATTAATTATTG",2,29.58,10.01,-0.75,0.12,1.94,1.11,0.01,">1 nonsynonymous","K94S T100N H189Q",3
"lib1","SARS-CoV-2","CAGGTATTATAAACGA",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D K56N E186D",3
"lib1","SARS-CoV-2","CAGGTCAACAATATTA",7,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","CAGGTCAAGTGGTGAC",4,40.15,6,-4.76,1.91,1.5,1.21,0.02,">1 nonsynonymous","N30S T55S C150K",3
"lib1","SARS-CoV-2","CAGGTCACGTGCAATG",1,67.59,10.89,0.12,0.06,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGTCATAAAAACCA",6,108.81,10.7,-0.06,0.06,2.87,1.07,0,">1 nonsynonymous","T55A K56D I138V P149R",4
"lib1","SARS-CoV-2","CAGGTCCAACCAAATC",2,31.53,6.36,-4.4,0.5,1.5,1.16,0.02,">1 nonsynonymous","R73S G86C",2
"lib1","SARS-CoV-2","CAGGTCCAAGCATAAC",7,51.73,10.7,-0.06,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGGTCCTACGCCGCA",1,8.07,10.26,-0.5,0.19,2.81,1,0.01,">1 nonsynonymous","T15R S36W",2
"lib1","SARS-CoV-2","CAGGTCGAAGTTCCAG",6,64.42,10.81,0.05,0.07,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CAGGTCGCGTCCATCT",2,76.1,10.73,-0.03,0.08,2.93,1.04,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","CAGGTCGCGTCCGTTA",1,44.93,10.07,-0.7,0.19,2.64,1.32,0.02,"1 nonsynonymous","Q163S",1
"lib1","SARS-CoV-2","CAGGTCTAAAACAAGA",3,34.39,8.48,-2.28,0.2,1.5,1.09,0.01,">1 nonsynonymous","T3I N92A",2
"lib1","SARS-CoV-2","CAGGTGACAGCGAAAA",7,76.86,10.63,-0.14,0.04,2.96,1,0,"1 nonsynonymous","G51H",1
"lib1","SARS-CoV-2","CAGGTGAGAAGTTTGT",14,82.19,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44P C61D D68K K87S",4
"lib1","SARS-CoV-2","CAGGTGATAGAAGCAT",2,35.38,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Y66H V77S Y159T T201M",4
"lib1","SARS-CoV-2","CAGGTGATGTGTTAAG",3,39.81,9.65,-1.11,0.06,2.92,1.03,0,"1 nonsynonymous","T170R",1
"lib1","SARS-CoV-2","CAGGTGATTGGAAAAT",1,11.04,8.13,-2.64,0.54,1.5,1,0.08,">1 nonsynonymous","V103L K128V P169D",3
"lib1","SARS-CoV-2","CAGGTGCAGGATTTCT",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K S29R N171H",3
"lib1","SARS-CoV-2","CAGGTGCCCGCAACAA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","F8Y P197*",2
"lib1","SARS-CoV-2","CAGGTGCCTACATGCC",5,52.29,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6T I88C D97H A105L",4
"lib1","SARS-CoV-2","CAGGTGCGAGGTGAGG",4,285.34,8.94,-1.83,0.07,2.77,1.11,0,"1 nonsynonymous","Y143T",1
"lib1","SARS-CoV-2","CAGGTGCGGCTTGCAA",6,114.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55A R73W A89N D137P",4
"lib1","SARS-CoV-2","CAGGTGGCACACTAGG",4,30.32,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","C61N I72V G86F",3
"lib1","SARS-CoV-2","CAGGTGTTAAAGCAGG",3,26.41,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V11N D90L L122D Y178N",4
"lib1","SARS-CoV-2","CAGGTGTTACTAGGTT",5,90.57,10.27,-0.49,0.04,2.92,1.03,0,">1 nonsynonymous","A33W A42R V77L Q84V K87W P149S",6
"lib1","SARS-CoV-2","CAGGTTAAATCAACTA",4,50.06,8.82,-1.94,0.09,3,1.03,0,">1 nonsynonymous","G155D T170R",2
"lib1","SARS-CoV-2","CAGGTTACCAAACTAA",1,1.52,NA,NA,NA,NA,NA,NA,"stop","K56N V77* T140M P149I",4
"lib1","SARS-CoV-2","CAGGTTAGAAATTTAG",6,139.59,9.88,-0.88,0.07,2.65,1.04,0,">1 nonsynonymous","F44A I142T",2
"lib1","SARS-CoV-2","CAGGTTAGAGATTCAA",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M T140S T148I Y165D",4
"lib1","SARS-CoV-2","CAGGTTAGATTAACAG",4,44.38,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D68P D90I K94V W106R C150G Y178D",6
"lib1","SARS-CoV-2","CAGGTTATATAGTATC",7,127.23,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N107G Y178D",2
"lib1","SARS-CoV-2","CAGGTTCGTTGTCAAG",2,6.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96V G101A Y121H",3
"lib1","SARS-CoV-2","CAGGTTGAATGGATTT",2,43.72,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35S D90Y V115M R127G C150G",5
"lib1","SARS-CoV-2","CAGGTTGACACACGCA",6,42.27,6.18,-4.58,0.71,1.5,1.12,0.02,">1 nonsynonymous","F17A A42G F62C G74T N107T",5
"lib1","SARS-CoV-2","CAGGTTGGCCTTCCAT",1,45.4,10.08,-0.69,0.06,2.72,1.06,0,">1 nonsynonymous","R136Q E141P",2
"lib1","SARS-CoV-2","CAGGTTGGGTTACATA",4,0.76,NA,NA,NA,NA,NA,NA,"stop","I28L T85N D98I T148K S184*",5
"lib1","SARS-CoV-2","CAGGTTTATATCGGTA",3,39.36,9.99,-0.78,0.11,2.03,1.05,0.01,">1 nonsynonymous","N130I D137C E154Q",3
"lib1","SARS-CoV-2","CAGGTTTATTAATTGT",4,64.57,9.69,-1.07,0.1,2.23,1.03,0,">1 nonsynonymous","R16Y D98V G116Y N130E",4
"lib1","SARS-CoV-2","CAGGTTTTTAATACTT",1,11.81,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","R25Y Y91S K114N",3
"lib1","SARS-CoV-2","CAGTAAAAAAGCCTGA",4,63.56,7.1,-3.66,0.27,1.78,1.16,0.01,">1 nonsynonymous","G86W Q163I",2
"lib1","SARS-CoV-2","CAGTAAAAACCTATGA",2,16.09,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","S45W Y165G",2
"lib1","SARS-CoV-2","CAGTAAAAATAAAACA",6,1.35,NA,NA,NA,NA,NA,NA,"stop","K26* T55F E141D K198S",4
"lib1","SARS-CoV-2","CAGTAAAACAAAGGAC",1,9.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K94T K114L G174Y A190Y",4
"lib1","SARS-CoV-2","CAGTAAAACGATGGAC",2,45.12,10.29,-0.47,0.08,2.74,1.13,0,">1 nonsynonymous","T3L P133S",2
"lib1","SARS-CoV-2","CAGTAAAAGCTGGTAT",10,119.1,8.1,-2.67,0.21,1.89,1.1,0.02,">1 nonsynonymous","Y66C R73E",2
"lib1","SARS-CoV-2","CAGTAAAAGTGCTATG",5,6.92,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F12I C49N T140R N151R Y175K",5
"lib1","SARS-CoV-2","CAGTAAAATGAATAAT",2,76.16,10.02,-0.75,0.12,2.05,1.07,0.01,">1 nonsynonymous","A89S E135N A192T",3
"lib1","SARS-CoV-2","CAGTAAACAATGAAAC",5,152.61,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A22C N30E D97Y N107W I138M G146V Y178N",7
"lib1","SARS-CoV-2","CAGTAAACCAGATGCC",7,54.82,6,-4.76,1.72,1.5,1.16,0.01,">1 nonsynonymous","A89D A105R Y119E A145Y",4
"lib1","SARS-CoV-2","CAGTAAAGGGGCAGGG",4,27.13,9.48,-1.29,0.09,2.82,1.09,0,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","CAGTAAATATATGACT",5,112.38,10.73,-0.04,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTAAATCGCATTAA",1,12.42,9.38,-1.38,0.16,2.57,1.17,0.01,">1 nonsynonymous","N1E Y119M K132P",3
"lib1","SARS-CoV-2","CAGTAAATGTGGAGGA",5,0,NA,NA,NA,NA,NA,NA,"stop","I88N S129L C158Y T170S Q176*",5
"lib1","SARS-CoV-2","CAGTAAATTTTACAGC",7,63.87,9.1,-1.67,0.23,1.5,1.1,0.02,">1 nonsynonymous","R25A K198V",2
"lib1","SARS-CoV-2","CAGTAACACTACTTCA",4,73.23,6.88,-3.89,0.35,1.5,1.13,0.02,">1 nonsynonymous","Y165S G174R",2
"lib1","SARS-CoV-2","CAGTAACATACCTTAG",2,19.12,6,-4.76,2,3,1.13,0.05,">1 nonsynonymous","A42G C102D",2
"lib1","SARS-CoV-2","CAGTAACATATACCGT",19,272.99,10.49,-0.27,0.04,2.9,1.04,0,">1 nonsynonymous","E10N V37E C61T S129D I138T",5
"lib1","SARS-CoV-2","CAGTAACATTCATCCT",1,26.75,10,-0.77,0.08,2.8,1.07,0,">1 nonsynonymous","S41R Y91M",2
"lib1","SARS-CoV-2","CAGTAACCCAAATACA",5,129.43,9.14,-1.63,0.13,1.71,1.11,0.01,">1 nonsynonymous","G86S S129L",2
"lib1","SARS-CoV-2","CAGTAACCGACTATAA",4,141.83,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I142S Q176T",2
"lib1","SARS-CoV-2","CAGTAACCGTACCCGG",12,211.14,10.52,-0.24,0.03,2.95,1.02,0,">1 nonsynonymous","P149T F156P P197L",3
"lib1","SARS-CoV-2","CAGTAACTCGACCAGG",6,83.3,10.65,-0.12,0.05,2.95,1.02,0,"1 nonsynonymous","E141F",1
"lib1","SARS-CoV-2","CAGTAAGAACACTTAT",1,17.02,6,-4.76,2,1.5,1.33,0.04,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","CAGTAAGAGGAACGTG",1,8.52,10.19,-0.58,0.16,2.03,1.09,0.01,">1 nonsynonymous","Y35D G152S A190V",3
"lib1","SARS-CoV-2","CAGTAAGGATATTCAT",1,32.52,10.19,-0.57,0.08,2.79,1.03,0,">1 nonsynonymous","V65T S129K",2
"lib1","SARS-CoV-2","CAGTAAGGTTAATCGA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","F44I L131*",2
"lib1","SARS-CoV-2","CAGTAAGTTAACAAAG",2,19.54,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G101F N157L H189N",3
"lib1","SARS-CoV-2","CAGTAATAAACATGAG",3,30.27,9.59,-1.17,0.19,1.64,1.15,0.02,">1 nonsynonymous","W106S G152T",2
"lib1","SARS-CoV-2","CAGTAATACACACGGA",5,41.97,10.67,-0.09,0.1,2.85,1,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","CAGTAATATTCTAACC",4,51.99,10.62,-0.14,0.04,2.98,1,0,">1 nonsynonymous","V65G T201V",2
"lib1","SARS-CoV-2","CAGTAATCAGAGCCGG",3,31.77,9.68,-1.09,0.09,1.86,1.1,0.01,">1 nonsynonymous","Y91L A105M",2
"lib1","SARS-CoV-2","CAGTAATCATTCCTTG",5,29.42,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R25A C49Y Q144L T201A",4
"lib1","SARS-CoV-2","CAGTAATCGGTATCCA",5,56.8,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","W23K Q84K P161Q V173A",4
"lib1","SARS-CoV-2","CAGTAATGTAAATAAG",12,37.57,6.01,-4.75,1.04,1.5,1.17,0.01,">1 nonsynonymous","F47Q D112S L122Y E154K T201K",5
"lib1","SARS-CoV-2","CAGTAATGTCACCCAT",4,80.59,10.27,-0.5,0.07,2.78,1.01,0,">1 nonsynonymous","N40S N58F",2
"lib1","SARS-CoV-2","CAGTAATGTTTATGAA",2,25.27,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","L5H I28R S41Y S113Q",4
"lib1","SARS-CoV-2","CAGTAATTATGTGTAT",5,41.06,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","S19F V37Y C61T G86D S139I",5
"lib1","SARS-CoV-2","CAGTAATTGACACCTT",2,44.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55F P82H",2
"lib1","SARS-CoV-2","CAGTAATTGATGTCTT",8,68.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6D D68T K87Q Y91N",4
"lib1","SARS-CoV-2","CAGTAATTGATTCATT",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I Y93W S139H",3
"lib1","SARS-CoV-2","CAGTAATTTTAGATGA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","W23* V37K Y119R",3
"lib1","SARS-CoV-2","CAGTACAAAGAGTATA",3,111.32,10.81,0.05,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTACAACTAAAGAT",1,20.82,10.86,0.1,0.1,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTACAAGCAGGATA",1,12.07,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","D90R W106R G146Y",3
"lib1","SARS-CoV-2","CAGTACAAGGCTGTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E N107K",2
"lib1","SARS-CoV-2","CAGTACACAGTTCAAT",1,75.43,9.36,-1.4,0.15,1.82,1.12,0.01,">1 nonsynonymous","C6L E135H",2
"lib1","SARS-CoV-2","CAGTACACGACCTCAA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","Y35S V52C L57Q G83Y V103* N107H I138N",7
"lib1","SARS-CoV-2","CAGTACAGAAGAGCAC",3,24.93,10.58,-0.19,0.05,3,1,0,">1 nonsynonymous","G83N E141L",2
"lib1","SARS-CoV-2","CAGTACATAGACTTAT",4,38.4,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51I L95V F99S S108L N151Q",5
"lib1","SARS-CoV-2","CAGTACATCCTATGCG",5,131.92,10.75,-0.02,0.06,2.91,1.05,0,"1 nonsynonymous","R16D",1
"lib1","SARS-CoV-2","CAGTACATGCACCACT",8,28.27,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","C49K F156L",2
"lib1","SARS-CoV-2","CAGTACCACAAGTAAC",3,61.48,10.19,-0.57,0.08,2.82,1,0,"1 nonsynonymous","E10W",1
"lib1","SARS-CoV-2","CAGTACCATTCTTCCA",5,3.45,NA,NA,NA,NA,NA,NA,"stop","C6T A33H D137R I142*",4
"lib1","SARS-CoV-2","CAGTACCCCAGCACAA",6,1.7,NA,NA,NA,NA,NA,NA,"stop","D90A V153S N171*",3
"lib1","SARS-CoV-2","CAGTACCCCCCCTCAT",3,39.23,9.79,-0.97,0.1,2.18,1.03,0,">1 nonsynonymous","L57W D90Y F160R Q168S",4
"lib1","SARS-CoV-2","CAGTACGAAATTCGAA",9,113.94,8.26,-2.51,0.17,2.37,1.08,0.01,">1 nonsynonymous","V65L Y119C G146T",3
"lib1","SARS-CoV-2","CAGTACGACTCTTTTG",2,0.96,NA,NA,NA,NA,NA,NA,"stop","E10D K56V T85* F156S T201R",5
"lib1","SARS-CoV-2","CAGTACGATCAAGTAT",6,8.22,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L131W P149L",2
"lib1","SARS-CoV-2","CAGTACGGAACCCTAG",1,5.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N F44P C61Y G83E F134S N171P L183F",7
"lib1","SARS-CoV-2","CAGTACGTGCATGAAA",3,67.29,10.09,-0.68,0.08,2.61,1.01,0,">1 nonsynonymous","Y35Q P149T K198T",3
"lib1","SARS-CoV-2","CAGTACTAATCTTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N30R Q84* K128D E186A",4
"lib1","SARS-CoV-2","CAGTACTACTGCCTCA",4,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q S41M N92L",3
"lib1","SARS-CoV-2","CAGTACTCACCACCGC",8,70.56,8.6,-2.17,0.3,1.5,1.16,0.03,">1 nonsynonymous","G116A L162R",2
"lib1","SARS-CoV-2","CAGTACTCGTAATAAA",2,23.44,10.68,-0.08,0.03,2.94,1.03,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","CAGTACTGTCAACGTA",2,3.31,NA,NA,NA,NA,NA,NA,"stop","G51* A81S",2
"lib1","SARS-CoV-2","CAGTAGAAAAAATTCC",13,186.3,10.74,-0.02,0.06,2.89,1.07,0,"1 nonsynonymous","T46Y",1
"lib1","SARS-CoV-2","CAGTAGAATTACGACC",12,73.98,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41V D97G I104L F134C Y159L",5
"lib1","SARS-CoV-2","CAGTAGAGACTAACTT",1,67.29,9.67,-1.1,0.07,2.74,1.08,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","CAGTAGATCAAAAACA",7,84.92,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L5P P82A W106P",3
"lib1","SARS-CoV-2","CAGTAGCATCCCATCT",1,123.97,9.4,-1.37,0.1,1.98,1.09,0,">1 nonsynonymous","L5H A18R S164I",3
"lib1","SARS-CoV-2","CAGTAGCCGAGTACAG",2,17.1,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","CAGTAGCGCAATAATA",1,45.96,8.71,-2.06,0.21,2.03,1.09,0.02,">1 nonsynonymous","N4Y K87R K128S G146Y Q163T",5
"lib1","SARS-CoV-2","CAGTAGCGTACTGGTA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","A18R R25* P149T",3
"lib1","SARS-CoV-2","CAGTAGTAAGATCATG",1,10.32,10.57,-0.2,0.25,2,1.05,0.02,">1 nonsynonymous","T3W E10T D98G V173I",4
"lib1","SARS-CoV-2","CAGTAGTCAAAGAACT",2,7.51,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K56L D68V D90N Q144M T148P",5
"lib1","SARS-CoV-2","CAGTAGTCACTTTACG",3,32.8,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N58K I80A A192T",3
"lib1","SARS-CoV-2","CAGTAGTCTAACGTGG",3,26.07,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G101T K114W Y165V",3
"lib1","SARS-CoV-2","CAGTAGTTAAGTGAAA",4,61.94,10.71,-0.05,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTAGTTACCCTTGC",3,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C K94D T140I",3
"lib1","SARS-CoV-2","CAGTATAACGCCTAGA",7,47.56,7.57,-3.2,0.25,1.5,1.17,0.01,">1 nonsynonymous","N1K S41Y D112S",3
"lib1","SARS-CoV-2","CAGTATAGATAACCTA",6,68.9,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L5M A18L Y39R D68L F99T",5
"lib1","SARS-CoV-2","CAGTATATATTGTACA",1,14.31,6.57,-4.2,0.63,1.5,1.08,0.06,">1 nonsynonymous","V103K D137W G166S",3
"lib1","SARS-CoV-2","CAGTATCCCGCGCTAT",2,45.45,10.81,0.04,0.09,2.84,1.08,0,">1 nonsynonymous","N130P S147N L183F",3
"lib1","SARS-CoV-2","CAGTATCCGATAACCG",2,72.55,9.58,-1.18,0.11,2.27,1.15,0,">1 nonsynonymous","C31F C61M Y91F N120V",4
"lib1","SARS-CoV-2","CAGTATCCTGCGCGAG",1,42.25,10.62,-0.14,0.07,2.94,1.04,0,">1 nonsynonymous","E10D N40S",2
"lib1","SARS-CoV-2","CAGTATCTTGCAAGGC",3,35.18,9.77,-0.99,0.11,2.24,1.09,0,">1 nonsynonymous","F47S G83N",2
"lib1","SARS-CoV-2","CAGTATGAATACGATT",5,193.3,8.5,-2.26,0.15,1.98,1.11,0.01,">1 nonsynonymous","L5E S45W S113T T148V",4
"lib1","SARS-CoV-2","CAGTATGCACATTTAA",1,42.06,10.02,-0.74,0.14,2.53,1,0.01,">1 nonsynonymous","S41F G83V S139T",3
"lib1","SARS-CoV-2","CAGTATGCTTAATACG",1,14.74,10.57,-0.2,0.09,2.87,1,0,">1 nonsynonymous","N40D S184L",2
"lib1","SARS-CoV-2","CAGTATGGAAGATTGT",2,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K K87R A89R T170W",4
"lib1","SARS-CoV-2","CAGTATGTGAGGATCC",3,9.68,9.44,-1.33,0.47,1.88,1.11,0.02,">1 nonsynonymous","T3S T15N F44A E141I",4
"lib1","SARS-CoV-2","CAGTATTACAAAATTA",3,66.23,9.8,-0.97,0.13,2.42,1.04,0.01,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","CAGTATTATCATGAGC",3,91.88,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","K87R C150K T193I",3
"lib1","SARS-CoV-2","CAGTATTCCACTCACC",9,211.4,10.81,0.04,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTATTCGGACAATT",2,19.59,9.23,-1.53,0.2,1.69,1.17,0.02,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","CAGTATTGAATTTAAT",3,43.59,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L5T Y93L T100V W106S",4
"lib1","SARS-CoV-2","CAGTATTGCCTGACGA",2,9.51,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","Y50S L57I R73T C102W N151S Y178L",6
"lib1","SARS-CoV-2","CAGTATTGGAAACTCT",2,68.68,10.24,-0.52,0.06,2.88,1,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","CAGTATTGTATACCCT",4,31.89,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F8S Y91S N157G Q168D",4
"lib1","SARS-CoV-2","CAGTATTGTCCGTTAT",4,37.04,7.77,-2.99,0.36,1.5,1.02,0.05,">1 nonsynonymous","E10M Y143G",2
"lib1","SARS-CoV-2","CAGTCAAAAAATCAAG",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50P D90V D112M",3
"lib1","SARS-CoV-2","CAGTCAAACATCATGA",2,39.41,10.28,-0.48,0.06,2.92,1,0,">1 nonsynonymous","D98Y K128V",2
"lib1","SARS-CoV-2","CAGTCAAACGCGGTAA",4,46.28,7.71,-3.05,0.28,1.5,1.09,0.03,">1 nonsynonymous","A105L E186S",2
"lib1","SARS-CoV-2","CAGTCAAACGGCAAGG",6,11.73,8.64,-2.12,0.25,1.5,1.03,0.02,">1 nonsynonymous","A42S Q84L D90H D98V",4
"lib1","SARS-CoV-2","CAGTCAAAGCTACGAT",3,7.3,6.4,-4.36,0.57,3,1.24,0.02,">1 nonsynonymous","N1H N40Y D98V S164L",4
"lib1","SARS-CoV-2","CAGTCAACAGATAAAT",4,60.32,8.16,-2.6,0.27,1.5,1.03,0.04,">1 nonsynonymous","A105T N110V P133L",3
"lib1","SARS-CoV-2","CAGTCAACCAAACGGA",4,55.18,10.77,0.01,0.09,2.9,1.07,0,">1 nonsynonymous","Q163M T201Y",2
"lib1","SARS-CoV-2","CAGTCAACGAATTTCA",7,44.77,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S43F T55L F99K V182H",4
"lib1","SARS-CoV-2","CAGTCAACGTCACGGA",2,22.12,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","D68G D112F K128H",3
"lib1","SARS-CoV-2","CAGTCAAGCGTATAAT",3,13.99,10.15,-0.61,0.29,1.93,1,0.03,">1 nonsynonymous","N13P A190G",2
"lib1","SARS-CoV-2","CAGTCAAGGACACCGC",6,5.81,NA,NA,NA,NA,NA,NA,"stop","G51W G83Y V103* L122*",4
"lib1","SARS-CoV-2","CAGTCACAAAGAACTT",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S D97I F99L",3
"lib1","SARS-CoV-2","CAGTCACACGTAGGTC",2,47.06,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8Y T63L P82H N120H",4
"lib1","SARS-CoV-2","CAGTCACATATATTGC",6,5.15,NA,NA,NA,NA,NA,NA,"stop","S29*",1
"lib1","SARS-CoV-2","CAGTCACCGCAGCCTT",2,32.43,9.69,-1.07,0.26,1.63,1.06,0.03,">1 nonsynonymous","R25F L122K",2
"lib1","SARS-CoV-2","CAGTCACGTCTAGCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N64* G83I",2
"lib1","SARS-CoV-2","CAGTCACTAAAGGTCC",5,81.9,7.77,-3,0.29,1.5,1.09,0.03,">1 nonsynonymous","A14F K114G G152Q",3
"lib1","SARS-CoV-2","CAGTCAGAGGCGTAAA",6,81.04,10.5,-0.26,0.06,2.9,1.02,0,"1 nonsynonymous","S19A",1
"lib1","SARS-CoV-2","CAGTCAGATTACTAAT",2,33.34,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V20Y G172S",2
"lib1","SARS-CoV-2","CAGTCAGGATTTCGTA",4,39.93,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55D T63Y F99N D112Y R124L Y165S",6
"lib1","SARS-CoV-2","CAGTCAGTTGTCCTGT",7,4.96,NA,NA,NA,NA,NA,NA,"stop","E10* K94P",2
"lib1","SARS-CoV-2","CAGTCATAAGAAACAA",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L V182I A190R",3
"lib1","SARS-CoV-2","CAGTCATTAGAAAACG",4,59.24,8.67,-2.09,0.31,1.5,1,0.05,">1 nonsynonymous","F8N W106T K114A",3
"lib1","SARS-CoV-2","CAGTCATTCATAATAC",6,26.48,7.39,-3.37,0.27,1.5,1.17,0.02,">1 nonsynonymous","F12E G116P E141G",3
"lib1","SARS-CoV-2","CAGTCATTCCGAATCG",18,426.57,10.67,-0.09,0.04,2.91,1.04,0,"1 nonsynonymous","S53R",1
"lib1","SARS-CoV-2","CAGTCCAAAGTTGAGA",4,61.2,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S19L L60R F134N",3
"lib1","SARS-CoV-2","CAGTCCAACACAAACC",5,13.23,6.1,-4.66,0.98,1.5,1.16,0.03,">1 nonsynonymous","P7C Y91R V103R S108E",4
"lib1","SARS-CoV-2","CAGTCCAACTAACAAT",2,14.09,10.92,0.15,0.1,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTCCAAGTTATGAT",1,17.17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23L F44S T63A N130T F156S",5
"lib1","SARS-CoV-2","CAGTCCAGAGTATATA",5,30.55,10.17,-0.6,0.08,2.42,1,0,"1 nonsynonymous","D34F",1
"lib1","SARS-CoV-2","CAGTCCATGAACTACC",3,17.06,6.18,-4.58,0.8,1.5,1.07,0.04,">1 nonsynonymous","F99Y Y165I",2
"lib1","SARS-CoV-2","CAGTCCCAAAAGAATT",1,5.11,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","G83T N92K S113N N157A",4
"lib1","SARS-CoV-2","CAGTCCCGACGCCTGG",5,120.77,6,-4.76,1.01,1.5,1.16,0.01,">1 nonsynonymous","Y39T V71D",2
"lib1","SARS-CoV-2","CAGTCCGTTGCCTCAA",3,34.55,8.54,-2.22,0.07,2.96,1.01,0,"1 nonsynonymous","N157L",1
"lib1","SARS-CoV-2","CAGTCCTGCGATATAC",3,16.12,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V71R A105K E135L K198C",4
"lib1","SARS-CoV-2","CAGTCCTTCTATCAAT",3,0.8,NA,NA,NA,NA,NA,NA,"stop","Y39F F47V E141* C195M",4
"lib1","SARS-CoV-2","CAGTCCTTGGGTCACC",4,2.09,NA,NA,NA,NA,NA,NA,"stop","D68T D98M E141D Q163* G172S",5
"lib1","SARS-CoV-2","CAGTCGAAATCGAGTT",3,37.08,10.76,-0.01,0.05,2.87,1.08,0,"1 nonsynonymous","S200A",1
"lib1","SARS-CoV-2","CAGTCGAATTAGATCT",7,98.89,10.31,-0.45,0.04,2.81,1.03,0,">1 nonsynonymous","L60M A81V T140K",3
"lib1","SARS-CoV-2","CAGTCGACAACTTCTA",1,119.56,10.24,-0.52,0.04,2.93,1.01,0,">1 nonsynonymous","K87G N120A V173R",3
"lib1","SARS-CoV-2","CAGTCGACTAATTATG",1,55.58,9.62,-1.14,0.14,2.44,1.08,0.01,">1 nonsynonymous","P149Q P161E",2
"lib1","SARS-CoV-2","CAGTCGAGAGAAATCG",5,61.83,10.52,-0.24,0.05,2.94,1.05,0,">1 nonsynonymous","E141T F156W",2
"lib1","SARS-CoV-2","CAGTCGAGTCAAAATA",3,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V L95M G101S",3
"lib1","SARS-CoV-2","CAGTCGATAGAGGTAC",2,22.8,7.11,-3.65,0.45,1.5,1.14,0.04,">1 nonsynonymous","L38M S45L T55G D98E L162K",5
"lib1","SARS-CoV-2","CAGTCGATAGGAACCC",5,75.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S Y143D",2
"lib1","SARS-CoV-2","CAGTCGCAACTAAAGT",5,105.97,10.63,-0.14,0.06,2.93,1.03,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","CAGTCGCCTGTTCATG",9,87.61,6.92,-3.84,0.35,1.5,1.2,0.02,">1 nonsynonymous","F62T Q84L R136F",3
"lib1","SARS-CoV-2","CAGTCGTACCTATAAA",7,72.18,10.77,0.01,0.06,2.92,1.06,0,">1 nonsynonymous","K114T T140K T201S",3
"lib1","SARS-CoV-2","CAGTCGTGCAAAGTTA",4,44.65,10.73,-0.03,0.03,2.94,1.02,0,">1 nonsynonymous","L60R Q144E T201V",3
"lib1","SARS-CoV-2","CAGTCGTTAACATAAA",4,36.23,6.82,-3.94,0.67,1.5,1.35,0.07,">1 nonsynonymous","N4T A89D S200P",3
"lib1","SARS-CoV-2","CAGTCTAAGATTGTTA",3,37.82,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N107L G146F K199Q",3
"lib1","SARS-CoV-2","CAGTCTCAAAGCAAAC",10,29.54,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","N1T R16K Y35R R124Y K132L C150L R179M",7
"lib1","SARS-CoV-2","CAGTCTCACGTAAGAT",7,55.07,6.24,-4.52,0.71,1.5,1.23,0.03,">1 nonsynonymous","N4Y C49L F99M",3
"lib1","SARS-CoV-2","CAGTCTCCGCACCCTT",1,25.94,6,-4.76,0.68,1.5,1.06,0,">1 nonsynonymous","S36L T63A C150Y",3
"lib1","SARS-CoV-2","CAGTCTCCTGAAATCT",3,64.95,10.68,-0.08,0.05,2.91,1.02,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","CAGTCTGAAACTAAAC",3,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21A N64T Q84S P96F L122G K128M T148H Q168T",8
"lib1","SARS-CoV-2","CAGTCTGTTGATCATA",6,89.61,6,-4.76,1.81,1.5,1.18,0.02,">1 nonsynonymous","L38R N64I A89V R124Y E154G",5
"lib1","SARS-CoV-2","CAGTCTTAAACAAAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","Y35* E135D Q163P",3
"lib1","SARS-CoV-2","CAGTCTTGAACTTTCA",5,33.73,7.14,-3.62,0.32,1.5,1.04,0.02,">1 nonsynonymous","V32I Y66R I104H V115S",4
"lib1","SARS-CoV-2","CAGTCTTTAGCTACTA",3,1.04,NA,NA,NA,NA,NA,NA,"stop","I104K F134*",2
"lib1","SARS-CoV-2","CAGTCTTTTATGACCG",2,12.61,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C61N F70K F99S T201K",4
"lib1","SARS-CoV-2","CAGTGAAAACTTTCAT",17,275.42,10.64,-0.13,0.04,2.91,1.04,0,">1 nonsynonymous","L5F K48L",2
"lib1","SARS-CoV-2","CAGTGAAAGCGCATTG",6,29.37,10,-0.77,0.14,1.97,1.05,0.01,">1 nonsynonymous","T15P N58M",2
"lib1","SARS-CoV-2","CAGTGAACAGCCTAAA",5,88.75,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R16G P96L F126T S139G",4
"lib1","SARS-CoV-2","CAGTGAACCAAGACAA",5,70.78,8.8,-1.96,0.15,1.89,1.09,0.01,">1 nonsynonymous","I28V D90I F156V",3
"lib1","SARS-CoV-2","CAGTGAAGAACGACGC",2,5.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63F",1
"lib1","SARS-CoV-2","CAGTGAAGCGAATCAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S Y35E T85S D137K K199N",5
"lib1","SARS-CoV-2","CAGTGAATATCTCCGA",3,51.27,6.25,-4.52,0.64,1.5,1.32,0.02,">1 nonsynonymous","Y66S R78Y F134I",3
"lib1","SARS-CoV-2","CAGTGAATTTAACTGA",1,10.25,6,-4.76,1.43,1.5,1.14,0.03,">1 nonsynonymous","G86M S113H",2
"lib1","SARS-CoV-2","CAGTGACAAAGGCTCC",21,40.01,6.04,-4.73,1.03,1.5,1.18,0.02,">1 nonsynonymous","G9A A14H T140K L183S",4
"lib1","SARS-CoV-2","CAGTGACAGGAGCCCT",2,10.72,9.04,-1.73,0.18,1.85,1.11,0.01,">1 nonsynonymous","T3Y F134S G152L",3
"lib1","SARS-CoV-2","CAGTGACGGAAAGGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F G166V",2
"lib1","SARS-CoV-2","CAGTGACTTAGTTTAT",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83C N151L",2
"lib1","SARS-CoV-2","CAGTGAGAAGTAATGT",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L P169S",2
"lib1","SARS-CoV-2","CAGTGAGAGCCAAAAG",2,6.98,9.79,-0.97,0.16,2.26,1.01,0,">1 nonsynonymous","C61V Q163P",2
"lib1","SARS-CoV-2","CAGTGAGGTAATCGAC",11,80.76,6,-4.76,2,3,1.16,0,"1 nonsynonymous","I72D",1
"lib1","SARS-CoV-2","CAGTGATAAATGACTG",4,66.14,6.41,-4.35,0.35,1.5,1.11,0.01,">1 nonsynonymous","F17K A33H N40K F47Y",4
"lib1","SARS-CoV-2","CAGTGATGCTGAATCC",3,0.28,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib1","SARS-CoV-2","CAGTGCAGGAGCAATA",7,8.47,NA,NA,NA,NA,NA,NA,"stop","K26* D97I E186S",3
"lib1","SARS-CoV-2","CAGTGCAGTCATAACA",5,75.73,10,-0.77,0.09,2.18,1.04,0,"1 nonsynonymous","L38Q",1
"lib1","SARS-CoV-2","CAGTGCCGCCACCATC",7,130.32,10.61,-0.16,0.02,2.93,1,0,">1 nonsynonymous","K128P P149I",2
"lib1","SARS-CoV-2","CAGTGCGGGACCTTTG",4,21.38,9.4,-1.37,0.26,1.81,1.05,0.03,">1 nonsynonymous","V11S D59G Y66C K87P",4
"lib1","SARS-CoV-2","CAGTGCTACTTATTAG",1,17.83,10.76,0,0.08,2.86,1.06,0,"1 nonsynonymous","T148E",1
"lib1","SARS-CoV-2","CAGTGCTGTAATACCT",1,6.87,6,-4.76,1.68,1.5,1.16,0.03,">1 nonsynonymous","N130S C158D",2
"lib1","SARS-CoV-2","CAGTGGAAAAGTAATA",3,99.68,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y35T K56R G86H Q176K",4
"lib1","SARS-CoV-2","CAGTGGAAATTAAATT",4,31.76,6.07,-4.69,1.32,1.5,1.31,0.04,">1 nonsynonymous","Y50S G86Q",2
"lib1","SARS-CoV-2","CAGTGGCAGGCCTAGG",3,31.42,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","R25L V32M",2
"lib1","SARS-CoV-2","CAGTGGGGGCACATTG",8,24.91,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S36V F62A R127L E141W G146Y V173L H189F",7
"lib1","SARS-CoV-2","CAGTGGTACAGTTCTA",2,27.2,8.08,-2.69,0.24,1.5,1.08,0.02,">1 nonsynonymous","S43D D97T L122P",3
"lib1","SARS-CoV-2","CAGTGGTCAAGTATCC",8,0.19,NA,NA,NA,NA,NA,NA,"stop","S19* K26R L60Q R136H G146Q Q163R T170C L187*",8
"lib1","SARS-CoV-2","CAGTGGTTCTGTTAAC",5,25.17,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","R73G I88K Q144R",3
"lib1","SARS-CoV-2","CAGTGTATACTGTAAC",2,0.68,NA,NA,NA,NA,NA,NA,"stop","C61Y G166Q Y175*",3
"lib1","SARS-CoV-2","CAGTGTCACTCCCCAG",2,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L D112M T170M V180S",4
"lib1","SARS-CoV-2","CAGTGTTCAATTAGAG",4,42.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S29A L57P G86R L95T S184K",5
"lib1","SARS-CoV-2","CAGTGTTTATCACAAG",2,33.53,10.23,-0.53,0.06,2.67,1.03,0,">1 nonsynonymous","A33L T55I N171C",3
"lib1","SARS-CoV-2","CAGTTAAACTTGTACA",3,8.1,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91S N107E",2
"lib1","SARS-CoV-2","CAGTTAAAGACTCACT",2,0.59,NA,NA,NA,NA,NA,NA,"stop","R27E D97* N109V T148S",4
"lib1","SARS-CoV-2","CAGTTAAATAACTTAA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","E76* D97Y G117K",3
"lib1","SARS-CoV-2","CAGTTAAATTAGATTA",4,0.59,NA,NA,NA,NA,NA,NA,"stop","Y39E K48*",2
"lib1","SARS-CoV-2","CAGTTAACACCTGAAG",1,241.75,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y93C E154A",2
"lib1","SARS-CoV-2","CAGTTAACGGAGTTAA",2,40.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8L A18K S45K T46K S139F Y178I",6
"lib1","SARS-CoV-2","CAGTTAAGACTAAGGA",1,24.58,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C61A K87T R127S Y175G S184Q",5
"lib1","SARS-CoV-2","CAGTTAAGGTCGGTTG",6,38.87,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","G9K S19G Y35W G146V",4
"lib1","SARS-CoV-2","CAGTTAAGGTCTTTGA",5,244.75,10.59,-0.17,0.04,2.9,1.02,0,">1 nonsynonymous","V37K Y123V",2
"lib1","SARS-CoV-2","CAGTTAAGTACAGATT",5,50.46,8.67,-2.1,0.14,1.5,1.1,0.01,">1 nonsynonymous","Y39G L162Q",2
"lib1","SARS-CoV-2","CAGTTAATAGTGGCAG",5,15.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P7K A18G Y21D K56G N109Y V173R",6
"lib1","SARS-CoV-2","CAGTTAATATGCCCAC",9,36.81,9.9,-0.86,0.12,2.08,1.05,0.01,">1 nonsynonymous","A14M A42Y L57Q",3
"lib1","SARS-CoV-2","CAGTTACACCACACAC",6,70.68,8.79,-1.97,0.13,2.24,1.11,0.01,">1 nonsynonymous","R136I F160D Q168T",3
"lib1","SARS-CoV-2","CAGTTACGACGATAAA",3,71.07,10.61,-0.15,0.04,2.91,1.06,0,">1 nonsynonymous","R27L L122C K198V",3
"lib1","SARS-CoV-2","CAGTTACGCACAATTC",6,73.39,9.92,-0.84,0.06,2.83,1.05,0,">1 nonsynonymous","T63Y F156N",2
"lib1","SARS-CoV-2","CAGTTACGGTCACCTC",5,21.52,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","R25V G146V",2
"lib1","SARS-CoV-2","CAGTTACGTCACAATG",4,1.75,NA,NA,NA,NA,NA,NA,"stop","G9* G101S F126V T148K G196M",5
"lib1","SARS-CoV-2","CAGTTACTTAAAAAGG",4,79.81,10.59,-0.18,0.07,2.92,1.02,0,">1 nonsynonymous","Y119R G166T H189R",3
"lib1","SARS-CoV-2","CAGTTAGAAACCCTTA",2,15.86,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T3N V32C P96S A105K T140S",5
"lib1","SARS-CoV-2","CAGTTAGCCGTAGTAG",9,126.34,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","N64S D137N L162N",3
"lib1","SARS-CoV-2","CAGTTAGTCGATCTAA",5,0.56,NA,NA,NA,NA,NA,NA,"stop","I2H G101F R127*",3
"lib1","SARS-CoV-2","CAGTTAGTTGAAAGAC",2,55.26,8.88,-1.88,0.08,2.84,1.06,0,">1 nonsynonymous","L5N N120R K128A G166W",4
"lib1","SARS-CoV-2","CAGTTATAAATTCCTA",1,28.8,10.6,-0.16,0.11,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTTATAATTTACAC",4,39.45,8.35,-2.41,0.15,2.11,1.11,0.01,">1 nonsynonymous","D90R A145P K198M",3
"lib1","SARS-CoV-2","CAGTTATAGAGTCCAC",7,0.05,NA,NA,NA,NA,NA,NA,"stop","D34H T55* T100S W106T N151R",5
"lib1","SARS-CoV-2","CAGTTATCCGTAACGG",5,63.14,10.57,-0.19,0.07,2.89,1.06,0,"1 nonsynonymous","F62H",1
"lib1","SARS-CoV-2","CAGTTATGACGGTGTA",2,17.94,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","N120L I142S C158F N171S",4
"lib1","SARS-CoV-2","CAGTTATGGCCTTGAC",1,10.48,10.16,-0.6,0.65,1.62,1.07,0.02,">1 nonsynonymous","F47N G83Y",2
"lib1","SARS-CoV-2","CAGTTATGTATTTAGA",2,31.21,6.94,-3.83,0.51,1.5,1.25,0.05,"1 nonsynonymous","D68A",1
"lib1","SARS-CoV-2","CAGTTATTACCATATT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","T46* L60V",2
"lib1","SARS-CoV-2","CAGTTCAACCGTAGCT",2,56.69,8.84,-1.93,0.17,1.68,1.08,0.02,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","CAGTTCACCGGGGATA",9,121.36,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5A S41R W106R P169E Q176E",5
"lib1","SARS-CoV-2","CAGTTCACCTATCAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30A D68V G86S G166K",4
"lib1","SARS-CoV-2","CAGTTCATCTCACAAT",2,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54C Y165S",2
"lib1","SARS-CoV-2","CAGTTCCAATTCAGCA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","A42M F62C Y66D Q79P G86*",5
"lib1","SARS-CoV-2","CAGTTCCATCCAGTGA",4,35.92,8.83,-1.93,0.21,1.5,1.1,0.02,">1 nonsynonymous","F17T T63S N109K Q163L",4
"lib1","SARS-CoV-2","CAGTTCCGCCACGCAC",9,72.36,8.59,-2.18,0.21,1.71,1.21,0.02,">1 nonsynonymous","C6L L111P",2
"lib1","SARS-CoV-2","CAGTTCCGTAAAATCT",7,65.98,10.54,-0.22,0.04,2.91,1.04,0,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","CAGTTCCTTGCGAATG",1,9.49,9.56,-1.21,0.15,2.59,1.04,0.01,">1 nonsynonymous","I2V G9V R73S N120D",4
"lib1","SARS-CoV-2","CAGTTCCTTTAGTCTT",10,116.46,6,-4.76,1.12,1.5,1.18,0.02,">1 nonsynonymous","L60S Y91E L122A",3
"lib1","SARS-CoV-2","CAGTTCGCTCCGTTCT",4,68.78,8.54,-2.22,0.12,2.56,1.13,0.01,">1 nonsynonymous","N64S Y143N",2
"lib1","SARS-CoV-2","CAGTTCTACTGACGTA",10,99.79,6,-4.76,1.71,1.5,1.21,0.03,">1 nonsynonymous","A18R S45L D112N",3
"lib1","SARS-CoV-2","CAGTTCTAGCAATATT",3,5.34,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13M K48E D112F Y165L",4
"lib1","SARS-CoV-2","CAGTTCTTCCCGTTGA",4,45.96,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L60T L95S",2
"lib1","SARS-CoV-2","CAGTTCTTGCAAACAT",7,73.58,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K94I D137S Y175W",3
"lib1","SARS-CoV-2","CAGTTCTTTTGCGGAT",2,32.9,8.77,-2,0.32,1.52,1.24,0.04,">1 nonsynonymous","I28L K48R G51D L60F Q84N",5
"lib1","SARS-CoV-2","CAGTTGAAATGCAAAA",2,13.74,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","C49D V77T I88T",3
"lib1","SARS-CoV-2","CAGTTGAGAATAACGC",1,32.25,6.22,-4.54,0.83,1.5,1.36,0.03,">1 nonsynonymous","N1D R127I",2
"lib1","SARS-CoV-2","CAGTTGCATAGGTCTA",10,2.03,NA,NA,NA,NA,NA,NA,"stop","S41P Y119S R127N R136M Y143*",5
"lib1","SARS-CoV-2","CAGTTGCGGGGACCTA",1,23.67,10.25,-0.51,0.08,2.89,1.08,0,">1 nonsynonymous","Y39I K87V D98K N151W C195Y",5
"lib1","SARS-CoV-2","CAGTTGCGTGATTTTA",2,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38H F62I F99M K132R N151Y",5
"lib1","SARS-CoV-2","CAGTTGGCAGATCGAT",5,2.22,NA,NA,NA,NA,NA,NA,"stop","V77L I88T V103A P149S G155F T201*",6
"lib1","SARS-CoV-2","CAGTTGTCAAGAACCG",4,19.26,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","P7G V103R K198I",3
"lib1","SARS-CoV-2","CAGTTGTTCCATCAAG",3,20.48,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8D T46G Y91T",3
"lib1","SARS-CoV-2","CAGTTTAAACTTCCAA",7,0.34,NA,NA,NA,NA,NA,NA,"stop","L5I A22V K56*",3
"lib1","SARS-CoV-2","CAGTTTAACACCTAAA",1,26.52,9.5,-1.26,0.11,2.81,1.08,0.01,">1 nonsynonymous","Y119Q K128F",2
"lib1","SARS-CoV-2","CAGTTTACCAAAAAGA",2,43.65,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86V Y91D Y175V",3
"lib1","SARS-CoV-2","CAGTTTAGCTATTAAA",2,21.33,8.46,-2.31,0.19,2.52,1.09,0.01,">1 nonsynonymous","K26E Q168K",2
"lib1","SARS-CoV-2","CAGTTTAGGCATCGCT",3,73.13,8.85,-1.92,0.25,2.12,1.13,0.02,">1 nonsynonymous","K56F P177S",2
"lib1","SARS-CoV-2","CAGTTTATTTGAATAC",5,27.74,6,-4.76,2,3,1.26,0,">1 nonsynonymous","F47R I88M",2
"lib1","SARS-CoV-2","CAGTTTCAACGGATCC",7,82.52,10.23,-0.53,0.05,2.87,1.02,0,">1 nonsynonymous","C31S F160Y T193N",3
"lib1","SARS-CoV-2","CAGTTTCAAGGGGCCT",1,18.54,10.82,0.06,0.11,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CAGTTTCACTCTCAAT",3,46.68,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F70R P149T",2
"lib1","SARS-CoV-2","CAGTTTCATTTTGAAA",17,337.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V103F N118K",2
"lib1","SARS-CoV-2","CAGTTTCCAAGGTCTT",4,31.23,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P96Y G116S",2
"lib1","SARS-CoV-2","CAGTTTCCGGCGTTGG",6,1.03,NA,NA,NA,NA,NA,NA,"stop","R27* E154L",2
"lib1","SARS-CoV-2","CAGTTTCGCTTAGACG",2,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23H A89R R124K",3
"lib1","SARS-CoV-2","CAGTTTCGTCTAAAAT",2,42.51,8.65,-2.11,0.12,2.21,1.12,0.01,">1 nonsynonymous","N107D Q144S",2
"lib1","SARS-CoV-2","CAGTTTCTAGTAACTT",1,1.31,NA,NA,NA,NA,NA,NA,"stop","G51L G101H Y143*",3
"lib1","SARS-CoV-2","CAGTTTCTTCTCCCCC",7,78.8,10.39,-0.38,0.05,2.88,1.04,0,">1 nonsynonymous","N120L A145V T201S",3
"lib1","SARS-CoV-2","CAGTTTGAACACACAA",1,2.87,NA,NA,NA,NA,NA,NA,"stop","G51V N92*",2
"lib1","SARS-CoV-2","CAGTTTGCCACGAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A67I P82L G86T Y91M S113L P149* G152R",7
"lib1","SARS-CoV-2","CAGTTTGCGACCCTTA",2,1646.78,6,-4.76,1.07,1.5,1.22,0.02,">1 nonsynonymous","P82V D90I S139H",3
"lib1","SARS-CoV-2","CAGTTTGGAAAAGTTC",1,29.05,10.84,0.07,0.09,2.93,1.05,0,">1 nonsynonymous","L122S V153I",2
"lib1","SARS-CoV-2","CAGTTTGGAAGCCAAA",2,19.54,9.95,-0.81,0.29,1.53,1.11,0.04,">1 nonsynonymous","P7L G9C N64C",3
"lib1","SARS-CoV-2","CAGTTTGTACTCAATT",1,8.54,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S41C A89L K128R S184R",4
"lib1","SARS-CoV-2","CAGTTTGTAGTTGACT",3,21.89,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A105L G155C V181E",3
"lib1","SARS-CoV-2","CAGTTTGTGTGTACTG",3,36.53,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L38K F44S T55S V103F",4
"lib1","SARS-CoV-2","CAGTTTTAACCCAACG",9,96.96,10.45,-0.32,0.03,2.9,1.02,0,">1 nonsynonymous","V37N S184L",2
"lib1","SARS-CoV-2","CAGTTTTAACCTAGAT",3,35.78,6,-4.76,1.7,1.5,1.14,0.01,">1 nonsynonymous","W23C P96Y Q176N",3
"lib1","SARS-CoV-2","CAGTTTTCAAGCGATC",6,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107K N157I T201M",3
"lib1","SARS-CoV-2","CAGTTTTGCTTTAGTG",12,252.96,8.72,-2.05,0.08,2.77,1.06,0,">1 nonsynonymous","G83M S164V N171L",3
"lib1","SARS-CoV-2","CAGTTTTTTGCCCCAT",3,41.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11L Y93R A105L K199T",4
"lib1","SARS-CoV-2","CATAAAAAAAGATGAA",3,92.27,8.49,-2.28,0.12,2.82,1.02,0.01,"1 nonsynonymous","N157R",1
"lib1","SARS-CoV-2","CATAAAAAATGTTGTA",6,71.71,8.08,-2.69,0.26,1.82,1.18,0.02,">1 nonsynonymous","D98T S113L",2
"lib1","SARS-CoV-2","CATAAAAACGGAAAAC",8,42.12,8.55,-2.21,0.12,1.75,1.11,0.01,">1 nonsynonymous","F8L Q84W P149L F160T",4
"lib1","SARS-CoV-2","CATAAAAACTAATTGC",3,43.82,10.25,-0.51,0.14,2.48,1,0.01,">1 nonsynonymous","L5R R136A A192E T201S",4
"lib1","SARS-CoV-2","CATAAAAACTTGATAG",10,139.84,10.15,-0.62,0.04,2.9,1.01,0,"1 nonsynonymous","N109H",1
"lib1","SARS-CoV-2","CATAAAAATCCATTCT",9,63.74,10.34,-0.42,0.04,2.89,1.06,0,"1 nonsynonymous","S147C",1
"lib1","SARS-CoV-2","CATAAAAATCCTAATC",7,140.68,10.61,-0.16,0.04,2.91,1.05,0,">1 nonsynonymous","E10Q D97T",2
"lib1","SARS-CoV-2","CATAAAACAAACATCA",2,6.3,10.24,-0.52,0.23,2.74,1.14,0.03,">1 nonsynonymous","T55V A105S G152N",3
"lib1","SARS-CoV-2","CATAAAACAACCCGGT",4,105.42,10.24,-0.53,0.05,2.83,1.01,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CATAAAACACAGTTTG",4,45.77,10.87,0.11,0.09,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAAACAGGTAGGC",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94P V115K",2
"lib1","SARS-CoV-2","CATAAAACGAGCCTAG",8,197.12,8.79,-1.98,0.06,2.67,1.1,0,">1 nonsynonymous","D90M Y119L",2
"lib1","SARS-CoV-2","CATAAAACTAAAAAAG",1,30.51,10.74,-0.02,0.09,2.89,1.06,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","CATAAAACTACAAATA",1,4.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","CATAAAACTCCAAACA",2,90.73,10.19,-0.58,0.06,2.93,1,0,">1 nonsynonymous","Y121Q G166A",2
"lib1","SARS-CoV-2","CATAAAAGAAATAGCA",2,10.09,8.55,-2.21,0.19,2.53,1.12,0.01,">1 nonsynonymous","C61Y S113T G174P",3
"lib1","SARS-CoV-2","CATAAAAGAGCAGTTT",14,83.15,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y50I Y91V G146A N151K G155S",5
"lib1","SARS-CoV-2","CATAAAAGATTTCCAC",5,121.41,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y50I D59L G116F Y121T K198S",5
"lib1","SARS-CoV-2","CATAAAAGCTCATATT",2,0.69,NA,NA,NA,NA,NA,NA,"stop","N40K C61*",2
"lib1","SARS-CoV-2","CATAAAAGGTTCAGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L95* V173Q",2
"lib1","SARS-CoV-2","CATAAAAGTACCGACA",5,86.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6I Y159A G174A T201F",4
"lib1","SARS-CoV-2","CATAAAATAAATTAGT",4,116.63,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39F I88W R124I",3
"lib1","SARS-CoV-2","CATAAAATAATAAATT",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K N118K S139L",3
"lib1","SARS-CoV-2","CATAAAATAGATACCC",1,25.35,8.3,-2.46,0.15,1.94,1.11,0.01,">1 nonsynonymous","T148C G155L P169K",3
"lib1","SARS-CoV-2","CATAAAATGCCATCCG",2,53.91,10.25,-0.52,0.07,2.86,1.06,0,">1 nonsynonymous","F12V G152D",2
"lib1","SARS-CoV-2","CATAAACAAATCCAGA",8,185.15,10.81,0.05,0.06,2.94,1.03,0,">1 nonsynonymous","K128N E141D",2
"lib1","SARS-CoV-2","CATAAACAAGACACCA",4,3.4,NA,NA,NA,NA,NA,NA,"stop","L38C T63G F156*",3
"lib1","SARS-CoV-2","CATAAACAATCCCTAT",5,51.44,9.11,-1.66,0.22,1.5,1.13,0.02,">1 nonsynonymous","G51H K114R Y178R",3
"lib1","SARS-CoV-2","CATAAACACGAATTGT",4,28.71,10.44,-0.32,0.04,2.86,1.1,0,">1 nonsynonymous","Y39L V180T S200T",3
"lib1","SARS-CoV-2","CATAAACAGGACCTGA",1,16.05,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68R F99Y",2
"lib1","SARS-CoV-2","CATAAACATCTAAACT",4,130.57,10.68,-0.08,0.04,2.89,1.09,0,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","CATAAACATCTGATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* S41V A89H W106G",4
"lib1","SARS-CoV-2","CATAAACATTCTCTCA",1,17.96,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","Y121I F156R Q176R L183A",4
"lib1","SARS-CoV-2","CATAAACCAAGAATAC",3,54.63,10.75,-0.01,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAACCAATAAAAC",10,131.78,10.79,0.03,0.04,2.94,1.03,0,"1 nonsynonymous","S53E",1
"lib1","SARS-CoV-2","CATAAACCAGATGGTT",5,71.17,10.27,-0.5,0.04,2.81,1.05,0,">1 nonsynonymous","G51M K199S",2
"lib1","SARS-CoV-2","CATAAACCCGGCACGG",7,0.32,NA,NA,NA,NA,NA,NA,"stop","N4* V11N",2
"lib1","SARS-CoV-2","CATAAACCGTCACATG",6,25.64,9.23,-1.54,0.16,1.5,1.1,0.01,">1 nonsynonymous","L60V W106C",2
"lib1","SARS-CoV-2","CATAAACCTTGGATTT",5,52.84,10.51,-0.26,0.08,2.89,1.06,0,">1 nonsynonymous","A33V S36L",2
"lib1","SARS-CoV-2","CATAAACGACAGACGT",10,107.14,6,-4.76,1.2,1.5,1.15,0.01,">1 nonsynonymous","V65T D112T L188F",3
"lib1","SARS-CoV-2","CATAAACGACATTACA",5,15.66,8.53,-2.24,0.19,1.75,1.18,0.02,">1 nonsynonymous","K87S W106V Q163T",3
"lib1","SARS-CoV-2","CATAAACGCATTCTCT",1,8.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F17T I28D L57C F99I C158L",5
"lib1","SARS-CoV-2","CATAAACGGCCCAAAG",3,8.77,6.12,-4.65,2,1.5,1.04,0,">1 nonsynonymous","D68L N110T Y119Q",3
"lib1","SARS-CoV-2","CATAAACTACAATGTT",1,110.38,10.05,-0.72,0.09,2.44,1.03,0,">1 nonsynonymous","A22R E135R T201D",3
"lib1","SARS-CoV-2","CATAAACTCCTGTTTT",4,54.8,8.79,-1.98,0.17,1.52,1.17,0.01,">1 nonsynonymous","S19K I142T",2
"lib1","SARS-CoV-2","CATAAACTTGGCTACT",1,17.18,7.72,-3.04,0.39,1.5,1.04,0.05,">1 nonsynonymous","D112V R136S",2
"lib1","SARS-CoV-2","CATAAACTTGGGATCC",2,19.61,8.71,-2.06,0.25,1.57,1.28,0.02,">1 nonsynonymous","L60R A81N K114Q L188P",4
"lib1","SARS-CoV-2","CATAAAGAAGCACAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N24W D90*",2
"lib1","SARS-CoV-2","CATAAAGAATAATACT",3,14.5,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F17P P54L R73V I80L",4
"lib1","SARS-CoV-2","CATAAAGAGTGACCGC",7,28.98,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N13V R73I D137Y",3
"lib1","SARS-CoV-2","CATAAAGCAACTCGTT",3,22.01,6.67,-4.1,0.46,1.5,1.12,0.04,">1 nonsynonymous","A42L A89L Y143R",3
"lib1","SARS-CoV-2","CATAAAGCACTGGCAA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T P133V C150G F167I",4
"lib1","SARS-CoV-2","CATAAAGCATTCATTA",2,40.89,10.6,-0.16,0.1,2.84,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAAGCGCGACCAT",3,27.52,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","L95Q D98T G166N",3
"lib1","SARS-CoV-2","CATAAAGGAAGTGAAC",7,93.71,10.73,-0.03,0.05,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAAGGACACGAAT",6,161.18,10.01,-0.75,0.04,2.83,1.02,0,">1 nonsynonymous","S139D T148N G174T",3
"lib1","SARS-CoV-2","CATAAAGGGAAATTCG",2,4.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20G",1
"lib1","SARS-CoV-2","CATAAAGGGCGAATTT",1,21.33,7.38,-3.39,0.42,1.5,1.1,0.06,">1 nonsynonymous","D90S S113E",2
"lib1","SARS-CoV-2","CATAAAGGTCTAAGAC",4,68.87,9.72,-1.05,0.13,2.55,1.01,0.01,">1 nonsynonymous","A42N Q84R N118H",3
"lib1","SARS-CoV-2","CATAAAGTAAAGCTGG",4,9.39,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","P54A S113Y K128H E141Y C150N",5
"lib1","SARS-CoV-2","CATAAAGTAAGCTTCA",4,35.8,10.41,-0.36,0.04,2.96,1,0,">1 nonsynonymous","I104T T201N",2
"lib1","SARS-CoV-2","CATAAAGTACCAGCCA",2,38.77,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10W R25L D68Y C102L",4
"lib1","SARS-CoV-2","CATAAAGTGAGAGTCT",4,4.63,NA,NA,NA,NA,NA,NA,"stop","Y123T I142L N151* Y175L T201S",5
"lib1","SARS-CoV-2","CATAAAGTTTAAACAG",1,0.56,NA,NA,NA,NA,NA,NA,"stop","F8L W23* V182S",3
"lib1","SARS-CoV-2","CATAAATAAAGTAGGA",13,97.09,10.47,-0.29,0.05,2.88,1.07,0,">1 nonsynonymous","K56S D90H",2
"lib1","SARS-CoV-2","CATAAATAAATCCAAG",1,12.89,10.82,0.05,0.13,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAATAAATTCAGA",10,35.09,8.6,-2.16,0.33,1.5,1,0.05,">1 nonsynonymous","L5M D97Y G101D",3
"lib1","SARS-CoV-2","CATAAATAAGAGCGAA",2,17.58,9.59,-1.17,0.2,2.12,1.01,0.02,">1 nonsynonymous","F62T I80M L122W T201S",4
"lib1","SARS-CoV-2","CATAAATACAAAAACA",6,30.32,6,-4.76,1.23,1.5,1.07,0,">1 nonsynonymous","D34K D68P K87G A145Y T201S",5
"lib1","SARS-CoV-2","CATAAATACCTCCGCA",7,0.67,NA,NA,NA,NA,NA,NA,"stop","E10* T15R",2
"lib1","SARS-CoV-2","CATAAATACGTATTTC",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y A89R T148P",3
"lib1","SARS-CoV-2","CATAAATAGCATTTAT",7,106.07,10.69,-0.07,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAATAGGTCAAAA",6,44.49,6.24,-4.52,0.74,1.5,1.19,0.02,">1 nonsynonymous","K56M L122P G196L",3
"lib1","SARS-CoV-2","CATAAATATAACTTAC",3,56.64,10.73,-0.04,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAATATACGTAAT",3,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M D98K T201P",3
"lib1","SARS-CoV-2","CATAAATATCTTAAAC",8,81.83,10.25,-0.51,0.04,2.92,1,0,">1 nonsynonymous","S36F Y123S",2
"lib1","SARS-CoV-2","CATAAATCAATCATCT",6,118.84,6.57,-4.19,0.28,1.5,1.14,0.01,">1 nonsynonymous","I142V C150L",2
"lib1","SARS-CoV-2","CATAAATCACATGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F47* N109Y N151V G172L",4
"lib1","SARS-CoV-2","CATAAATCACCTTCTG",5,31.85,10.75,-0.01,0.04,2.93,1,0,">1 nonsynonymous","I104L N130M",2
"lib1","SARS-CoV-2","CATAAATCAGAACTTA",4,31.69,9.98,-0.79,0.08,2.74,1.08,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","CATAAATCAGACCGTT",6,86.78,7.58,-3.19,0.09,2.18,1.11,0,"1 nonsynonymous","C158N",1
"lib1","SARS-CoV-2","CATAAATCATAAATCC",6,32.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D90V L131A I138T G172C",4
"lib1","SARS-CoV-2","CATAAATCCTGTATAA",4,44.64,10.68,-0.09,0.09,2.91,1.07,0,"1 nonsynonymous","A190D",1
"lib1","SARS-CoV-2","CATAAATCTACTTTCA",1,12.04,6,-4.76,2,2.86,1.11,0.05,">1 nonsynonymous","T15R R25A D98S P177T",4
"lib1","SARS-CoV-2","CATAAATCTAGCTGAC",3,10.87,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F8G C61T V103M",3
"lib1","SARS-CoV-2","CATAAATGGAGAATAA",11,58.53,7.37,-3.39,0.5,1.5,1.19,0.07,">1 nonsynonymous","K94L Y178L",2
"lib1","SARS-CoV-2","CATAAATGGTCCTTGG",3,74.61,10.63,-0.14,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAAATGTTGTTGAT",4,45.66,9.75,-1.01,0.09,2.51,1.05,0,">1 nonsynonymous","N13G S43E C61S G152F",4
"lib1","SARS-CoV-2","CATAAATTAATTCCTA",3,0.69,NA,NA,NA,NA,NA,NA,"stop","T55R D98* S129N T170N",4
"lib1","SARS-CoV-2","CATAAATTAGAGGAAG",12,90.65,6,-4.76,1.7,1.5,1.17,0.01,">1 nonsynonymous","N4S K87D K94E K198L",4
"lib1","SARS-CoV-2","CATAAATTAGTCAATG",10,132.18,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I88R I142N S164Q",3
"lib1","SARS-CoV-2","CATAAATTATATGAAG",3,11.47,10.32,-0.45,0.07,2.9,1.08,0,">1 nonsynonymous","G83S S184V",2
"lib1","SARS-CoV-2","CATAAATTATATGAAT",8,1.33,NA,NA,NA,NA,NA,NA,"stop","E10T I28* N107Q K114N",4
"lib1","SARS-CoV-2","CATAAATTCTCCAATG",1,8.08,6.01,-4.75,1.35,1.5,1.15,0.05,">1 nonsynonymous","R16L C61R D90K E141P P161S",5
"lib1","SARS-CoV-2","CATAAATTTAGCAACG",1,26.04,10.11,-0.65,0.06,2.89,1.09,0,">1 nonsynonymous","R73M T148M",2
"lib1","SARS-CoV-2","CATAACAAAAAGCAAC",8,40.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Q79A K94E Y159K",3
"lib1","SARS-CoV-2","CATAACAAACTTATTC",2,8.21,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N4S G86D Q144K G174R",4
"lib1","SARS-CoV-2","CATAACAAATACGTAT",3,21.05,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","R136D R179S F185C",3
"lib1","SARS-CoV-2","CATAACAATCGTGAAA",4,9.43,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","S36Y L95H N107I",3
"lib1","SARS-CoV-2","CATAACAATCTCGTTC",3,60.19,9.13,-1.63,0.13,1.71,1.14,0.01,">1 nonsynonymous","D97G R124K",2
"lib1","SARS-CoV-2","CATAACAATTGGCCAG",2,23.76,10.39,-0.37,0.06,2.84,1.09,0,">1 nonsynonymous","A33Y L111P A190V K198M",4
"lib1","SARS-CoV-2","CATAACACAGTCAATC",7,91.73,10.5,-0.26,0.03,2.89,1.04,0,"1 nonsynonymous","N58I",1
"lib1","SARS-CoV-2","CATAACACATTAAATA",2,14.09,9.32,-1.44,0.1,2.7,1.24,0,">1 nonsynonymous","N4K T55N A145F T201L",4
"lib1","SARS-CoV-2","CATAACACCATGTATG",6,24.06,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","V115T K132Y S147Y G155M F167C",5
"lib1","SARS-CoV-2","CATAACACGCCATTTA",2,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53P N92A N118Y",3
"lib1","SARS-CoV-2","CATAACAGACACCTAA",1,11.36,9.33,-1.43,0.13,2.32,1.15,0.01,">1 nonsynonymous","K48N P133S N157D",3
"lib1","SARS-CoV-2","CATAACAGACGATGAC",2,34.74,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L5D F44N G51V G86Q S129A F167S",6
"lib1","SARS-CoV-2","CATAACAGAGAAGCTG",1,10.61,8.28,-2.48,0.33,2.4,1.17,0.05,">1 nonsynonymous","I2K S45K S108T G117N",4
"lib1","SARS-CoV-2","CATAACAGCCAACCTT",6,38.22,10.18,-0.58,0.07,2.84,1.02,0,">1 nonsynonymous","P7E Y35L S41L D97K I142H T201L",6
"lib1","SARS-CoV-2","CATAACAGGAGGACTA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","S36M L95Q Y119W K128*",4
"lib1","SARS-CoV-2","CATAACAGGCTCCCTC",3,6.5,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","Q84L P149F P169Q G172L",4
"lib1","SARS-CoV-2","CATAACAGTAAAATAA",1,11.58,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W23R V37Q P54V T85A N107S V153P T170N T201E",8
"lib1","SARS-CoV-2","CATAACATACCCCGTC",17,7.58,NA,NA,NA,NA,NA,NA,"stop","R25E N30* Y123D",3
"lib1","SARS-CoV-2","CATAACATCCGCACAG",6,211.31,10.79,0.03,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAACATTATTGGCT",7,37.69,10.78,0.01,0.08,2.85,1.08,0,">1 nonsynonymous","I2V Y35L T55G N120G",4
"lib1","SARS-CoV-2","CATAACCAATATAAAG",4,6621.39,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G86T C158H T201S",3
"lib1","SARS-CoV-2","CATAACCAGAATCGTT",1,8.56,7.98,-2.79,0.31,1.79,1.17,0.03,">1 nonsynonymous","A22T L60F I88L",3
"lib1","SARS-CoV-2","CATAACCAGCTAAAAT",2,64.14,10.76,-0.01,0.05,2.91,1.05,0,">1 nonsynonymous","I2R N24R",2
"lib1","SARS-CoV-2","CATAACCCAAGACATA",5,109.54,9.86,-0.9,0.12,1.98,1.04,0.01,">1 nonsynonymous","I2A A14F L188W",3
"lib1","SARS-CoV-2","CATAACCCCAACTAAG",2,18.05,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C31P F44I A81T G83T N120Q S129M G174A",7
"lib1","SARS-CoV-2","CATAACCGAATAGTGG",4,2.53,NA,NA,NA,NA,NA,NA,"stop","L5R T15A C49* D98E P197S",5
"lib1","SARS-CoV-2","CATAACCGCCGACGTG",1,13.98,9.89,-0.87,0.13,2.01,1.02,0.01,">1 nonsynonymous","A105N T201K",2
"lib1","SARS-CoV-2","CATAACCGCGTTTAAA",8,86.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5V F62N D68Q G152Y",4
"lib1","SARS-CoV-2","CATAACCGGCTTACAT",3,6.06,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I2C S41L P54K P82D Y121P S139W",6
"lib1","SARS-CoV-2","CATAACCGTCCATCCA",11,4.79,NA,NA,NA,NA,NA,NA,"stop","N1L Y121A Y143* Q176V",4
"lib1","SARS-CoV-2","CATAACCGTTGCGTGA",5,24.14,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","T55I G83L Y91A D98I",4
"lib1","SARS-CoV-2","CATAACCTAAAACAAG",2,40.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53W G86V L131N",3
"lib1","SARS-CoV-2","CATAACCTAGCCTACA",5,65.19,9.86,-0.91,0.09,2.05,1.09,0,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","CATAACCTATACGAAA",1,12.72,10.48,-0.29,0.07,2.83,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAACCTCCTACTTA",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R V103G H189Y",3
"lib1","SARS-CoV-2","CATAACCTTATACAGC",4,11.24,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T15M T140W N151P",3
"lib1","SARS-CoV-2","CATAACGCACAGCGGC",9,57.66,6.01,-4.75,1.23,1.5,1.23,0.03,">1 nonsynonymous","F12R Y143L L183F",3
"lib1","SARS-CoV-2","CATAACGCTTGAGTCC",4,124.48,10.84,0.07,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAACTAAACAAAAT",5,25.02,10.26,-0.5,0.08,2.87,1.01,0,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","CATAACTATCTCTAAT",1,25.11,10.85,0.08,0.08,2.94,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CATAACTCTCAAGAAT",9,114.76,10.22,-0.54,0.04,2.79,1.03,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","CATAACTCTGGTAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* A33L I72R P197Q",4
"lib1","SARS-CoV-2","CATAACTGAGGTGACG",2,51.96,10.76,0,0.07,2.84,1.06,0,"1 nonsynonymous","A22K",1
"lib1","SARS-CoV-2","CATAACTGATGAACAC",7,0.02,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","CATAACTTAGAAAACG",2,39.52,9.24,-1.52,0.1,2.75,1.17,0,">1 nonsynonymous","T63A Y119S",2
"lib1","SARS-CoV-2","CATAACTTCTCCACAT",6,137.19,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T100N N157V N171L",3
"lib1","SARS-CoV-2","CATAAGAATGAGTCTA",2,48.26,10.67,-0.1,0.05,2.93,1.05,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","CATAAGACGTTTATAA",3,15.94,10.18,-0.59,0.09,2.96,1,0,">1 nonsynonymous","C61R F99M",2
"lib1","SARS-CoV-2","CATAAGACTAGGTACT",3,0,NA,NA,NA,NA,NA,NA,"stop","L5S F12M L38* T85R",4
"lib1","SARS-CoV-2","CATAAGACTGAATTAA",2,13.89,9.52,-1.24,0.19,1.9,1.1,0.02,"1 nonsynonymous","F8E",1
"lib1","SARS-CoV-2","CATAAGAGACTGCAAA",2,20.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1V A67F C150G",3
"lib1","SARS-CoV-2","CATAAGAGCCCTTTGG",7,51.02,10.13,-0.63,0.09,2.42,1.04,0,"1 nonsynonymous","P96E",1
"lib1","SARS-CoV-2","CATAAGAGGATTCACT",9,121.49,9.38,-1.39,0.11,1.73,1.09,0,">1 nonsynonymous","A89F G152N",2
"lib1","SARS-CoV-2","CATAAGAGTCGGTACT",5,105.46,10.13,-0.63,0.06,2.86,1.03,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","CATAAGAGTTTGAATC",5,43.03,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6R G166F",2
"lib1","SARS-CoV-2","CATAAGATAGACAACC",1,36.24,6.27,-4.5,0.74,1.5,1.16,0.02,">1 nonsynonymous","S43W Y91M W106R A190T",4
"lib1","SARS-CoV-2","CATAAGATGTGTCGTA",4,58.18,10.07,-0.69,0.13,2.35,1.01,0.01,">1 nonsynonymous","A18E G51A",2
"lib1","SARS-CoV-2","CATAAGCAAAAGAATC",8,142.5,8.96,-1.81,0.08,2.57,1.11,0,">1 nonsynonymous","C6E V11F F12L P169A",4
"lib1","SARS-CoV-2","CATAAGCCGTAGAACT",1,8.98,8.22,-2.54,0.65,1.5,1.22,0.06,"1 nonsynonymous","Y93V",1
"lib1","SARS-CoV-2","CATAAGCGATGCAATC",3,38.61,10.79,0.03,0.08,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CATAAGCGCGAGTGAC",4,31.98,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","I88P T148S",2
"lib1","SARS-CoV-2","CATAAGCGGAATACAC",9,46.95,10.79,0.02,0.06,2.92,1.02,0,">1 nonsynonymous","V37S K56M",2
"lib1","SARS-CoV-2","CATAAGCGTGAAACGA",2,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","CATAAGCTCAACAACA",7,19.75,7.56,-3.21,0.52,1.5,1.04,0.06,">1 nonsynonymous","A42F G152V F185S",3
"lib1","SARS-CoV-2","CATAAGGAAGGACAAA",6,1.15,NA,NA,NA,NA,NA,NA,"stop","Q84* L125A R136L",3
"lib1","SARS-CoV-2","CATAAGGAATATGTTG",1,17.34,10.71,-0.06,0.1,2.7,1.2,0.01,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","CATAAGGACCTTTGAT",3,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L S45V G51I T170R",4
"lib1","SARS-CoV-2","CATAAGGCCCATTATG",1,6.21,6.84,-3.93,0.97,1.5,1.2,0.04,">1 nonsynonymous","G51T F62C N120T G152T K199E",5
"lib1","SARS-CoV-2","CATAAGGCTACTTTTA",9,150.86,8.18,-2.59,0.1,2.55,1.08,0,"1 nonsynonymous","Y175L",1
"lib1","SARS-CoV-2","CATAAGGCTCATACAG",4,61.03,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I80V R124T",2
"lib1","SARS-CoV-2","CATAAGGTTTACTACG",3,35.59,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F8Y C31S S184P",3
"lib1","SARS-CoV-2","CATAAGTAAGTGTAGA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","F62* Y119F T148R G155L",4
"lib1","SARS-CoV-2","CATAAGTCCTTAATCG",3,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","CATAAGTCTCACACTC",1,8.33,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C6F S45Q Y159P R179S",4
"lib1","SARS-CoV-2","CATAAGTTAAAATGCA",12,114.9,10.19,-0.58,0.06,2.65,1.01,0,">1 nonsynonymous","G9C V32Y N64T D97G",4
"lib1","SARS-CoV-2","CATAAGTTAGACCAGC",1,4.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77N",1
"lib1","SARS-CoV-2","CATAAGTTCAGAAAAT",5,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9C",1
"lib1","SARS-CoV-2","CATAAGTTTACCCTCA",4,14.92,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","K94Q R179S",2
"lib1","SARS-CoV-2","CATAATAAAAACATTT",1,73.74,9.99,-0.78,0.09,2.52,1.06,0,">1 nonsynonymous","C31V T55V",2
"lib1","SARS-CoV-2","CATAATAAAAATCTCT",7,0.44,NA,NA,NA,NA,NA,NA,"stop","V37D T55* G86Q K94*",4
"lib1","SARS-CoV-2","CATAATAAAACAAGAA",1,23.4,10.84,0.07,0.08,2.91,1.05,0,">1 nonsynonymous","S43V V153I",2
"lib1","SARS-CoV-2","CATAATAAACAGGTTA",2,18.2,10.6,-0.17,0.1,2.89,1.07,0.01,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","CATAATAACACCCCCT",10,4.16,NA,NA,NA,NA,NA,NA,"stop","L5E S45* Y91H C158Y",4
"lib1","SARS-CoV-2","CATAATAAGCCTGACA",4,21.37,7.53,-3.24,0.23,1.76,1.21,0.02,">1 nonsynonymous","T3K K48D A105C Q144M T201V",5
"lib1","SARS-CoV-2","CATAATAAGGAAAGAA",6,45.14,10.68,-0.08,0.04,2.9,1.06,0,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","CATAATAATATTCATT",1,12.77,10.43,-0.33,0.12,2.85,1.13,0.01,">1 nonsynonymous","V37R Q144A E154N",3
"lib1","SARS-CoV-2","CATAATACAGTAGAGC",3,11.7,10.37,-0.4,0.11,2.89,1,0,">1 nonsynonymous","P7L Q163C",2
"lib1","SARS-CoV-2","CATAATACCTACTGAT",6,110.2,10.04,-0.72,0.09,2.17,1.01,0,">1 nonsynonymous","T3L S139I",2
"lib1","SARS-CoV-2","CATAATACTAGAAACA",9,161.81,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V71A P82Q K87S R127T V153N L162G Q176A",7
"lib1","SARS-CoV-2","CATAATACTTAAAATT",1,11.28,10.36,-0.41,0.11,2.83,1,0.01,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","CATAATAGCATGGTCT",3,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G A33W A89Y P149M P177S",5
"lib1","SARS-CoV-2","CATAATAGGATGAATC",11,212.57,10.66,-0.11,0.03,2.91,1.03,0,"1 nonsynonymous","F134S",1
"lib1","SARS-CoV-2","CATAATAGGGAGGAGT",3,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y R124T G172R",3
"lib1","SARS-CoV-2","CATAATAGTAGGTACC",12,173.42,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31F K48Y Y119C G155F",4
"lib1","SARS-CoV-2","CATAATAGTGGCTCTT",1,54.79,10.82,0.06,0.08,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CATAATATATATCGAT",5,104.67,10.55,-0.22,0.06,2.96,1,0,">1 nonsynonymous","S29R V37H L122A G155R K199Y",5
"lib1","SARS-CoV-2","CATAATATCATTTTAA",6,69.64,8.57,-2.2,0.11,2.18,1.11,0,">1 nonsynonymous","G9L G74R",2
"lib1","SARS-CoV-2","CATAATCAACTAGAAC",5,46.61,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V11R N64I G74C D97S C150S",5
"lib1","SARS-CoV-2","CATAATCAAGTACGTC",6,18.03,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R27G F99D F185S",3
"lib1","SARS-CoV-2","CATAATCAGAAAGTAC",10,39.03,6.01,-4.76,0.66,1.5,1.13,0.01,">1 nonsynonymous","C49L N118R S139I G146R F160D",5
"lib1","SARS-CoV-2","CATAATCAGAACACTG",1,28.14,10.04,-0.72,0.09,2.58,1.01,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","CATAATCATATATGGG",1,75.11,9.52,-1.25,0.16,1.79,1.12,0.01,">1 nonsynonymous","I28H V181L",2
"lib1","SARS-CoV-2","CATAATCCAGAATAGG",7,36.94,10.04,-0.73,0.12,2.21,1.03,0.01,">1 nonsynonymous","R16M F62S E186V",3
"lib1","SARS-CoV-2","CATAATCCAGGGTGCA",9,99.47,9.97,-0.8,0.05,2.83,1.04,0,">1 nonsynonymous","N64C A89S I142Y",3
"lib1","SARS-CoV-2","CATAATCCCCACAGAT",3,50.66,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","C61A D98G P133L C158V S184Y",5
"lib1","SARS-CoV-2","CATAATCCCGAAATTA",6,143.42,10.81,0.05,0.07,2.91,1.04,0,"1 nonsynonymous","S129N",1
"lib1","SARS-CoV-2","CATAATCCCGGTGATC",1,15.65,10.36,-0.41,0.07,2.92,1.01,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","CATAATCCGAATACCT",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I S113R R127A T148Y F167L",5
"lib1","SARS-CoV-2","CATAATCCTGAGATTA",4,104.79,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5R N107S N118F C158L",4
"lib1","SARS-CoV-2","CATAATCGAAACCCAC",2,13.25,9.56,-1.21,0.12,1.97,1.07,0.01,">1 nonsynonymous","F17M Q79M",2
"lib1","SARS-CoV-2","CATAATCGATCAGCGA",2,27.95,8.76,-2,0.14,2.83,1.03,0.01,">1 nonsynonymous","S45H K87C Y119G V173Q",4
"lib1","SARS-CoV-2","CATAATCGCGGTGAAC",1,6.84,6.71,-4.05,0.6,1.5,1.3,0.07,"1 nonsynonymous","V20M",1
"lib1","SARS-CoV-2","CATAATCTACCAGAAA",5,51.1,10.13,-0.63,0.1,2.48,1.03,0,">1 nonsynonymous","F44V D90L S139T",3
"lib1","SARS-CoV-2","CATAATCTAGAAGGCA",15,178.08,10.41,-0.35,0.03,2.9,1.04,0,"1 nonsynonymous","N13E",1
"lib1","SARS-CoV-2","CATAATGAAAATGCAA",1,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102D W106R C158S",3
"lib1","SARS-CoV-2","CATAATGAAACACGCG",2,10.88,10.19,-0.57,0.13,2.42,1.07,0.01,">1 nonsynonymous","G116W F134H",2
"lib1","SARS-CoV-2","CATAATGAAATATGAA",4,51.52,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1D C6I S29Y L95A L122S F156I",6
"lib1","SARS-CoV-2","CATAATGAACAAATGA",3,126.78,9.3,-1.47,0.1,2.28,1.11,0,">1 nonsynonymous","I2N L57T G155N",3
"lib1","SARS-CoV-2","CATAATGACTGCGGAA",3,46.16,10.5,-0.27,0.04,2.9,1,0,">1 nonsynonymous","T3G A33T",2
"lib1","SARS-CoV-2","CATAATGAGAGAGCCC",4,30.1,9.43,-1.34,0.18,1.65,1.09,0.01,"1 nonsynonymous","R25A",1
"lib1","SARS-CoV-2","CATAATGAGTCGTTTT",1,15.72,10.93,0.17,0.1,2.98,1,0,"1 nonsynonymous","S29N",1
"lib1","SARS-CoV-2","CATAATGCAAATCAAC",6,52.66,9.65,-1.12,0.12,1.81,1.12,0.01,">1 nonsynonymous","N4L D59E A105G K128V",4
"lib1","SARS-CoV-2","CATAATGCACGCGCCT",8,62.55,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","W23T Y91A V194T",3
"lib1","SARS-CoV-2","CATAATGGAAGAATAA",1,1.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","CATAATGGCACCAATT",16,84.46,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","D59N D97T V103L T170Y",4
"lib1","SARS-CoV-2","CATAATGGTTTTAAAT",1,6.27,10.36,-0.4,0.27,2.86,1.13,0.02,"1 nonsynonymous","P54T",1
"lib1","SARS-CoV-2","CATAATGTAATAACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* P82I Y159R R179*",4
"lib1","SARS-CoV-2","CATAATGTCATAAGAC",3,2.54,NA,NA,NA,NA,NA,NA,"stop","L60S K94R W106* Y159A K198F",5
"lib1","SARS-CoV-2","CATAATTAAGGCGAAG",1,27.77,10.49,-0.27,0.06,2.82,1.16,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","CATAATTAAGTGAGTT",6,102.17,9.67,-1.09,0.17,1.84,1.16,0.01,">1 nonsynonymous","F12Y V32K N64R",3
"lib1","SARS-CoV-2","CATAATTAGCTATAAG",2,38.29,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D59L A67T G86V G101I S139Y P149H",6
"lib1","SARS-CoV-2","CATAATTAGGATCACG",4,30.93,8.86,-1.91,0.15,1.5,1.09,0.01,">1 nonsynonymous","F17E E141T V153L",3
"lib1","SARS-CoV-2","CATAATTATATCACCT",10,94.12,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41A D68M G83R G166R",4
"lib1","SARS-CoV-2","CATAATTCCTTTGTGC",4,29.27,10.68,-0.08,0.09,2.96,1,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","CATAATTCGATAGATG",8,58.46,6.11,-4.65,1.2,1.5,1.31,0.03,">1 nonsynonymous","F47W P96L",2
"lib1","SARS-CoV-2","CATAATTGCGCATGCG",1,32.37,10.58,-0.18,0.14,2.81,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CATAATTTCTCAGAAC",6,71.16,10.07,-0.69,0.09,2.82,1.08,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","CATAATTTGATTTGTG",4,33.44,10.71,-0.06,0.09,2.92,1.04,0,">1 nonsynonymous","L5V N120S",2
"lib1","SARS-CoV-2","CATAATTTGGAAAGAA",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N I88G F167S",3
"lib1","SARS-CoV-2","CATAATTTTATCTGGC",4,0.78,NA,NA,NA,NA,NA,NA,"stop","L60* R73C",2
"lib1","SARS-CoV-2","CATACAAAAGTCAAAG",4,19.66,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3C Y50S Y66R K87H T201W",5
"lib1","SARS-CoV-2","CATACAAACAACGCAT",5,76.96,10.15,-0.61,0.07,2.82,1,0,"1 nonsynonymous","D34A",1
"lib1","SARS-CoV-2","CATACAAACACGACTG",4,55.06,10.74,-0.03,0.05,2.94,1,0,"1 nonsynonymous","L60G",1
"lib1","SARS-CoV-2","CATACAAACTAAAATA",3,29.88,10.49,-0.28,0.03,2.95,1,0,">1 nonsynonymous","I142M F185L",2
"lib1","SARS-CoV-2","CATACAAATAAACACC",4,57.5,10.18,-0.58,0.08,2.68,1.06,0,">1 nonsynonymous","I2S Y35N E154S",3
"lib1","SARS-CoV-2","CATACAAATAAGCACA",6,60.47,10.6,-0.16,0.05,2.9,1.02,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","CATACAAATCCATGGA",7,126.16,10.75,-0.02,0.06,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CATACAAATTCAAATT",4,79.41,10.09,-0.68,0.06,2.9,1,0,">1 nonsynonymous","S36N N118T",2
"lib1","SARS-CoV-2","CATACAACCTGGACTT",8,214.68,10.41,-0.36,0.05,2.89,1.02,0,">1 nonsynonymous","T85S V181I",2
"lib1","SARS-CoV-2","CATACAAGCCCAACAA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73V L183S",2
"lib1","SARS-CoV-2","CATACAAGGTGTACTA",9,22.96,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","G9S S69K D97L V103R",4
"lib1","SARS-CoV-2","CATACAAGTAAACACC",2,27.28,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","S19R C61H D98Y C158Y F167Y",5
"lib1","SARS-CoV-2","CATACAATAGCGAGAT",4,115.71,7.4,-3.37,0.18,1.5,1.17,0.01,"1 nonsynonymous","R179C",1
"lib1","SARS-CoV-2","CATACAATGAAAGCTT",5,80.82,10.29,-0.47,0.04,2.81,1.07,0,">1 nonsynonymous","G9S A81S K94R",3
"lib1","SARS-CoV-2","CATACAATGTCAAAAA",5,59.59,8.74,-2.03,0.13,1.76,1.18,0.01,">1 nonsynonymous","L57K L122E G152T",3
"lib1","SARS-CoV-2","CATACACAACCTACAC",2,0.83,NA,NA,NA,NA,NA,NA,"stop","F62M Q84K G101* L131G",4
"lib1","SARS-CoV-2","CATACACACACTTCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib1","SARS-CoV-2","CATACACAGAAGATTG",5,91.3,10.32,-0.44,0.03,2.89,1.02,0,"1 nonsynonymous","F134D",1
"lib1","SARS-CoV-2","CATACACAGACACAAA",6,40.83,7.98,-2.78,0.27,1.5,1.15,0.02,">1 nonsynonymous","N40L P82V D90N T201L",4
"lib1","SARS-CoV-2","CATACACATGAATCAT",1,5.31,9.07,-1.69,0.46,1.81,1,0.04,">1 nonsynonymous","Y21Q I28L F62S D98N P191V",5
"lib1","SARS-CoV-2","CATACACATTATACGT",1,38.26,10.7,-0.07,0.08,2.82,1.03,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","CATACACATTGTAGAC",1,3.02,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CATACACCTACAATAA",6,42.83,6.78,-3.98,0.24,1.5,1.14,0.01,">1 nonsynonymous","N40Y V77S",2
"lib1","SARS-CoV-2","CATACACCTAGTAAGT",1,0.61,NA,NA,NA,NA,NA,NA,"stop","N13K A67Y K132*",3
"lib1","SARS-CoV-2","CATACACCTTCCTAGC",8,81.56,10.72,-0.04,0.05,2.93,1.01,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","CATACACTAAACAAGT",5,12.19,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","S41T V103G L162R",3
"lib1","SARS-CoV-2","CATACACTCCAGCTTT",1,1.58,NA,NA,NA,NA,NA,NA,"stop","F12W I72*",2
"lib1","SARS-CoV-2","CATACACTGTTACTCA",1,38.63,10.79,0.02,0.07,2.91,1.07,0,"1 nonsynonymous","P54A",1
"lib1","SARS-CoV-2","CATACACTTATCTAAA",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F F99S",2
"lib1","SARS-CoV-2","CATACAGAAACAAAGT",9,92.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y91N F167G P177W",3
"lib1","SARS-CoV-2","CATACAGTAGGCAGAT",2,38.93,6.97,-3.79,0.2,1.5,1.05,0.01,">1 nonsynonymous","Y35M V77F N118V A190E",4
"lib1","SARS-CoV-2","CATACAGTGCTACAAT",3,19.93,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F12L C49L Y66G",3
"lib1","SARS-CoV-2","CATACATAACCAAAAA",6,0.31,NA,NA,NA,NA,NA,NA,"stop","R27* Y35V S41A R136F",4
"lib1","SARS-CoV-2","CATACATAATAACCCT",6,6.13,NA,NA,NA,NA,NA,NA,"stop","E10* V20P L38Y V77W Y143H P197N",6
"lib1","SARS-CoV-2","CATACATCTAAATCTA",4,71.78,10.24,-0.52,0.04,2.81,1.08,0,"1 nonsynonymous","A105W",1
"lib1","SARS-CoV-2","CATACATCTAGAATTT",8,44.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V65E P133L",2
"lib1","SARS-CoV-2","CATACATGAATTGGAC",15,119.33,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y21R D34A Q79L C150K P161T",5
"lib1","SARS-CoV-2","CATACATTATCGCCAA",2,0.25,NA,NA,NA,NA,NA,NA,"stop","I80K D97T S113* L122R F160H P191L",6
"lib1","SARS-CoV-2","CATACCAAAGTTGAAG",1,62.67,8.8,-1.97,0.19,1.65,1.19,0.01,">1 nonsynonymous","S29T Y50F D112L Y121F",4
"lib1","SARS-CoV-2","CATACCACCAAATAAA",2,54.37,8.64,-2.12,0.4,1.5,1,0.06,">1 nonsynonymous","S19L D98H P149S",3
"lib1","SARS-CoV-2","CATACCACCACCCTAT",2,41.1,9.49,-1.27,0.17,1.92,1.18,0.01,">1 nonsynonymous","E10Q T15P N107K",3
"lib1","SARS-CoV-2","CATACCACCAGCGTTT",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G I88G F99T Y119F S184G",5
"lib1","SARS-CoV-2","CATACCACCCGTAAAA",6,20.85,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49I D112N P149S E154W K198Y",5
"lib1","SARS-CoV-2","CATACCACGCGTGCCT",15,24.34,NA,NA,NA,NA,NA,NA,"stop","A14* K56L G83N L95M",4
"lib1","SARS-CoV-2","CATACCAGAAGTTCTA",8,3.51,NA,NA,NA,NA,NA,NA,"stop","G9* A33N N40L G166Q",4
"lib1","SARS-CoV-2","CATACCAGATAACAAA",3,5.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23R K87S P96N",3
"lib1","SARS-CoV-2","CATACCAGGCAAAGAG",1,27.55,6.56,-4.2,0.51,1.5,1.19,0.02,">1 nonsynonymous","R25F T55W",2
"lib1","SARS-CoV-2","CATACCATCGAAGACC",3,51.94,10.29,-0.47,0.08,2.75,1.01,0,">1 nonsynonymous","D98L S139R",2
"lib1","SARS-CoV-2","CATACCATGACAAACA",2,44.98,9.77,-1,0.2,1.86,1.06,0.01,">1 nonsynonymous","V65E S164Q",2
"lib1","SARS-CoV-2","CATACCATTCTGGAGC",1,7.66,10.45,-0.32,0.08,2.91,1.03,0,">1 nonsynonymous","Y143F G152C",2
"lib1","SARS-CoV-2","CATACCCAAATAACGA",18,281.73,10.25,-0.52,0.05,2.9,1.04,0,">1 nonsynonymous","L38W K87F T201R",3
"lib1","SARS-CoV-2","CATACCCACATCCACC",3,0.3,NA,NA,NA,NA,NA,NA,"stop","S29E A81C L122* P161F V173T",5
"lib1","SARS-CoV-2","CATACCCACGGCATAT",2,38.01,9.15,-1.61,0.07,2.89,1.07,0,">1 nonsynonymous","V32S Y119H G155K",3
"lib1","SARS-CoV-2","CATACCCAGATAAGAG",5,52.13,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G86M R127S S184F",3
"lib1","SARS-CoV-2","CATACCCATTCCGAGG",7,73.45,6,-4.76,0.82,1.5,1.09,0.01,">1 nonsynonymous","V37E A67F G86D E141V",4
"lib1","SARS-CoV-2","CATACCCCAAACAACA",5,34.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I N58Q Q176K",3
"lib1","SARS-CoV-2","CATACCCCTACGAAAT",2,19.49,9.67,-1.09,0.1,2.85,1.04,0,">1 nonsynonymous","N64W L125T",2
"lib1","SARS-CoV-2","CATACCCGGTGTGAAG",2,21.2,10.64,-0.13,0.08,2.84,1.12,0,"1 nonsynonymous","A190L",1
"lib1","SARS-CoV-2","CATACCCTAGCCAAGC",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K S139I",2
"lib1","SARS-CoV-2","CATACCCTAGCCCACG",2,6.37,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y35R Y119T S129H Q176W",4
"lib1","SARS-CoV-2","CATACCCTCAATACCT",1,21.07,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64S F167D",2
"lib1","SARS-CoV-2","CATACCGACTAGAACC",2,23.32,8.38,-2.38,0.21,1.5,1.08,0.02,">1 nonsynonymous","E10Y K94M",2
"lib1","SARS-CoV-2","CATACCGCAAGCAGGA",4,30.19,9.88,-0.88,0.07,2.78,1.04,0,">1 nonsynonymous","N107S E154P",2
"lib1","SARS-CoV-2","CATACCGCAAGGCTCG",3,0.7,NA,NA,NA,NA,NA,NA,"stop","A33V F47R I142K T170K S200*",5
"lib1","SARS-CoV-2","CATACCGCCAACCTCT",2,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L N118R I142N G155S",4
"lib1","SARS-CoV-2","CATACCGCCTCTCCTA",1,10.81,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","N1S A14S N157I Y175A",4
"lib1","SARS-CoV-2","CATACCGTATGACGAG",1,7.84,10.73,-0.03,0.1,2.97,1,0,">1 nonsynonymous","A33G V37A",2
"lib1","SARS-CoV-2","CATACCTAACTTACCA",4,0.33,NA,NA,NA,NA,NA,NA,"stop","C31M L38M T63S G86L K114* S129T",6
"lib1","SARS-CoV-2","CATACCTACCGCCGCG",7,70.02,9.45,-1.31,0.23,1.5,1,0.02,">1 nonsynonymous","G86R F134Y",2
"lib1","SARS-CoV-2","CATACCTATTTCATTA",3,44.28,10.12,-0.64,0.12,2.39,1.06,0.01,">1 nonsynonymous","T85D D98Y",2
"lib1","SARS-CoV-2","CATACCTCGAATTACA",2,12.61,6.13,-4.63,0.96,1.5,1.27,0.03,">1 nonsynonymous","A22K K48Q V71S G174W",4
"lib1","SARS-CoV-2","CATACCTCTCTAAAGG",5,80.92,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","A18G D90H F134T C150N",4
"lib1","SARS-CoV-2","CATACCTGGAGCCATA",10,79.36,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L60S N92K Q163V V180Y",4
"lib1","SARS-CoV-2","CATACCTGTTCATAAC",8,129.96,10.29,-0.47,0.05,2.75,1.03,0,">1 nonsynonymous","S41Y N130F E141F",3
"lib1","SARS-CoV-2","CATACCTTACTTCCAC",12,38.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23T C49A A89Y Y121P",4
"lib1","SARS-CoV-2","CATACCTTCATTGTTT",2,6.03,6,-4.76,2,3,1.09,0.04,">1 nonsynonymous","C61V L95A C102H P149T",4
"lib1","SARS-CoV-2","CATACCTTGAAATCCA",4,26.94,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C6S C49T P82E Y119I",4
"lib1","SARS-CoV-2","CATACCTTGACTGTTC",1,35.18,9.83,-0.93,0.13,2.29,1.06,0.01,">1 nonsynonymous","V20S T201S",2
"lib1","SARS-CoV-2","CATACGAAAGCATATA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","V103* L122S",2
"lib1","SARS-CoV-2","CATACGAACACTTCAG",1,27.34,6,-4.76,2,3,1.2,0,">1 nonsynonymous","G51S G83V D98F P149Q V173T",5
"lib1","SARS-CoV-2","CATACGAAGGGTGTCT",6,35.22,6.36,-4.41,0.6,1.5,1.23,0.03,">1 nonsynonymous","F62Y K87T L122S V182M",4
"lib1","SARS-CoV-2","CATACGAATGAAAAAA",4,24.65,10.01,-0.76,0.13,2.39,1.02,0.01,">1 nonsynonymous","S36R N40S E186C",3
"lib1","SARS-CoV-2","CATACGAGAGTCAGAG",8,13.75,9.44,-1.32,0.24,1.98,1.14,0.03,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","CATACGAGCCTCATAG",4,148.95,10.22,-0.55,0.03,2.84,1.03,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","CATACGATACAATGCA",8,71.23,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4M S41R Y66S D90Y L162S",5
"lib1","SARS-CoV-2","CATACGATATTCAAAT",1,20.18,10.85,0.08,0.11,2.9,1,0,">1 nonsynonymous","I2F P54S",2
"lib1","SARS-CoV-2","CATACGATGAAAAGCC",5,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A N130K",2
"lib1","SARS-CoV-2","CATACGCAACAATCAA",3,22.55,7.18,-3.59,0.32,1.5,1.1,0.03,">1 nonsynonymous","G9P S19V S36R S147T P197A",5
"lib1","SARS-CoV-2","CATACGCACCCAATCT",3,76.12,10.78,0.02,0.07,2.97,1.01,0,"1 nonsynonymous","S43T",1
"lib1","SARS-CoV-2","CATACGCACTCCAAGG",2,31.6,10.78,0.01,0.07,2.95,1.01,0,"1 nonsynonymous","N4E",1
"lib1","SARS-CoV-2","CATACGCCCTTGAACA",2,21.73,6,-4.76,0.92,1.5,1.09,0.01,">1 nonsynonymous","A22P G86Y P96Y S200P",4
"lib1","SARS-CoV-2","CATACGCTAGGCCATG",1,3.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G196Q",1
"lib1","SARS-CoV-2","CATACGGAACCAAAGG",1,114.16,8.55,-2.21,0.14,1.52,1.11,0.01,">1 nonsynonymous","Y91L I138H Q176M",3
"lib1","SARS-CoV-2","CATACGGAAGCAAAGA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","CATACGGAGTACAATA",5,99.24,10.08,-0.69,0.04,2.91,1.01,0,">1 nonsynonymous","N107R L122Y",2
"lib1","SARS-CoV-2","CATACGGGCGGGAGCA",4,27.69,9.08,-1.68,0.21,1.63,1.16,0.01,">1 nonsynonymous","D34S K48I W106M",3
"lib1","SARS-CoV-2","CATACGGTAAAAGAAG",5,26.34,9.24,-1.53,0.15,1.5,1.17,0.01,">1 nonsynonymous","S36R P149T V173T",3
"lib1","SARS-CoV-2","CATACGTAGAACGTAA",1,30.24,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N92R L162V",2
"lib1","SARS-CoV-2","CATACGTGCGAATTAG",4,78.22,10.42,-0.35,0.06,2.9,1.02,0,">1 nonsynonymous","S45A Y121F",2
"lib1","SARS-CoV-2","CATACGTTAAACGCTA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","Y39N N107K Y123*",3
"lib1","SARS-CoV-2","CATACGTTCTCGTTCG",2,36.93,9.86,-0.91,0.1,2.01,1.12,0,">1 nonsynonymous","C6A D97C",2
"lib1","SARS-CoV-2","CATACTAAACTATGTA",5,39.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182L",1
"lib1","SARS-CoV-2","CATACTAAAGCAACAA",3,27.93,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y93E R124V N151D",3
"lib1","SARS-CoV-2","CATACTAAATAATTCG",1,8.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W L95M G101Y V115L",4
"lib1","SARS-CoV-2","CATACTAACCTCCGCT",7,56.67,10.71,-0.05,0.07,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATACTAAGACATCTA",6,70.83,10.62,-0.14,0.07,2.9,1.04,0,"1 nonsynonymous","G116T",1
"lib1","SARS-CoV-2","CATACTAAGCCCACCA",7,77.79,6,-4.76,1.9,1.5,1.17,0.01,">1 nonsynonymous","P82N D97C",2
"lib1","SARS-CoV-2","CATACTAATACTTCAA",1,1.73,NA,NA,NA,NA,NA,NA,"stop","S43F K94E T100* R136L",4
"lib1","SARS-CoV-2","CATACTAATATACGGT",1,17.88,9.98,-0.79,0.07,2.9,1,0,">1 nonsynonymous","T100E E154H",2
"lib1","SARS-CoV-2","CATACTACAAATCTCG",6,453.45,10.76,-0.01,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATACTACAAGGAGGC",5,24.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L57C Q84R L162R",3
"lib1","SARS-CoV-2","CATACTACAATGAGAG",11,282.63,10.17,-0.6,0.04,2.88,1.02,0,">1 nonsynonymous","G9V I142F",2
"lib1","SARS-CoV-2","CATACTACGAATCTTA",3,95.17,10.76,0,0.06,2.96,1.02,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","CATACTAGAATTAGGG",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F D97N Y123W S139Y V173A",5
"lib1","SARS-CoV-2","CATACTAGACGGACCG",8,21.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50L N64D V77M",3
"lib1","SARS-CoV-2","CATACTAGACTACAGT",2,0.48,NA,NA,NA,NA,NA,NA,"stop","N110* F156M",2
"lib1","SARS-CoV-2","CATACTAGCAATTAAT",5,146.18,10.41,-0.36,0.05,2.92,1.02,0,">1 nonsynonymous","R16Y K87N",2
"lib1","SARS-CoV-2","CATACTATCTTTATAT",1,14.18,10.74,-0.02,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATACTATGTTTAGTA",3,13.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4T I28G C49G F167M",4
"lib1","SARS-CoV-2","CATACTCACATTGGAA",1,42.33,10.33,-0.43,0.06,2.84,1.03,0,">1 nonsynonymous","G51K V115L P149I",3
"lib1","SARS-CoV-2","CATACTCATTTACACA",4,21.17,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37A T55N D90Y Q176F",4
"lib1","SARS-CoV-2","CATACTCCAAGATGAA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F L38P F44E C61N",4
"lib1","SARS-CoV-2","CATACTCCATTGAGTT",9,25.4,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","C49P A105R S147D N151G",4
"lib1","SARS-CoV-2","CATACTCGAAACAACT",6,46.76,10.85,0.09,0.09,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CATACTCGAGTTCCTA",2,53.84,9.57,-1.19,0.11,1.92,1.09,0,">1 nonsynonymous","A33S D90I",2
"lib1","SARS-CoV-2","CATACTCGATAAGAAA",1,508.8,9.61,-1.15,0.09,2,1.05,0,">1 nonsynonymous","N13A T55C N151Y K198M",4
"lib1","SARS-CoV-2","CATACTCTAAAAGTGA",3,77.34,10.23,-0.53,0.07,2.79,1.01,0,"1 nonsynonymous","N24L",1
"lib1","SARS-CoV-2","CATACTCTGGTTTCTA",1,15.33,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37I S69R R127V A190I",4
"lib1","SARS-CoV-2","CATACTGCCCACAACT",1,8.8,10.72,-0.04,0.05,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CATACTGTCGCGTGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","S19E A33* A42D D90S T201Y",5
"lib1","SARS-CoV-2","CATACTTAAAAGATCC",11,39.82,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","K48T I72H K87R Q144N",4
"lib1","SARS-CoV-2","CATACTTCAGGCCCCA",8,3.96,NA,NA,NA,NA,NA,NA,"stop","Y50F Y119*",2
"lib1","SARS-CoV-2","CATACTTGGATAGCCT",2,17.7,10.34,-0.43,0.08,2.98,1,0.01,">1 nonsynonymous","Y35L S43V L122K P169S V182C",5
"lib1","SARS-CoV-2","CATACTTTAGGTAGAA",4,17.84,6.1,-4.66,2,1.5,1.13,0.02,">1 nonsynonymous","C61S V71S P96L S113V",4
"lib1","SARS-CoV-2","CATACTTTGCGTGATG",2,0.34,NA,NA,NA,NA,NA,NA,"stop","C6V N13Y Y39L F70Y F156*",5
"lib1","SARS-CoV-2","CATAGAAAACTGAAGA",3,26.89,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6L N24R F70G C158I",4
"lib1","SARS-CoV-2","CATAGAAAATTCTGGT",3,83.85,10.6,-0.17,0.07,2.88,1.05,0,">1 nonsynonymous","K56Q G152L",2
"lib1","SARS-CoV-2","CATAGAAACAGTAGTT",15,78.33,6.95,-3.81,0.42,1.5,1.12,0.04,">1 nonsynonymous","V52P N58S K114R G155Y T201Y",5
"lib1","SARS-CoV-2","CATAGAAACATCGGTG",7,52.53,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G74V G86I W106T",3
"lib1","SARS-CoV-2","CATAGAAATAGCACCT",7,106.95,10.3,-0.46,0.04,2.89,1.04,0,">1 nonsynonymous","A14E V32H P197E",3
"lib1","SARS-CoV-2","CATAGAAATAGCGGCC",2,29.57,6.1,-4.66,0.8,1.5,1.18,0.03,">1 nonsynonymous","Y91I F99V P149L",3
"lib1","SARS-CoV-2","CATAGAAATCCGCTGA",1,18.24,9.67,-1.09,0.16,2.56,1.01,0.02,">1 nonsynonymous","V11Y L60A F160I T201R",4
"lib1","SARS-CoV-2","CATAGAACAACCCCAA",3,23.41,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19K K26P",2
"lib1","SARS-CoV-2","CATAGAACAAGCGTAG",1,8.73,9.23,-1.54,0.24,1.91,1.08,0.03,">1 nonsynonymous","G9M T63W S129L",3
"lib1","SARS-CoV-2","CATAGAACCAACACAG",1,8.9,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C31L K48T D90I I138W S147W",5
"lib1","SARS-CoV-2","CATAGAACCATATAAT",2,34.82,10.77,0.01,0.03,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGAACGGTGTGAT",5,121.74,10.38,-0.38,0.06,2.9,1.03,0,">1 nonsynonymous","C61M D90S",2
"lib1","SARS-CoV-2","CATAGAACGTAATCTG",5,56.02,10.02,-0.75,0.07,2.9,1.02,0,">1 nonsynonymous","C61T G117L N171F Y178H",4
"lib1","SARS-CoV-2","CATAGAAGCCTTGACT",1,11.65,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A14N Y39W T55C K94P F99N G117F P133I T170L",8
"lib1","SARS-CoV-2","CATAGAAGTGGAAGGT",6,98.59,9.78,-0.99,0.12,2.2,1.09,0.01,">1 nonsynonymous","C6I V37R G51R",3
"lib1","SARS-CoV-2","CATAGAAGTTTAGTCT",3,35.44,6.73,-4.03,0.63,1.5,1.19,0.05,">1 nonsynonymous","L5P G83W W106R Y119K",4
"lib1","SARS-CoV-2","CATAGACAAAGAAGAC",5,1.94,NA,NA,NA,NA,NA,NA,"stop","G9K V52L T63* Q84L G101M P149I",6
"lib1","SARS-CoV-2","CATAGACAACTCATCC",5,4.5,NA,NA,NA,NA,NA,NA,"stop","T46S C61S Y91* D112K",4
"lib1","SARS-CoV-2","CATAGACAATAGGTCA",4,37.23,10.43,-0.33,0.05,2.96,1,0,">1 nonsynonymous","T85W K87T",2
"lib1","SARS-CoV-2","CATAGACACTCCGTCG",1,180.82,10.23,-0.54,0.04,2.84,1.01,0,">1 nonsynonymous","S41W N64R D90K",3
"lib1","SARS-CoV-2","CATAGACAGATTGATG",10,232.72,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T55G R124S G146A G172M",4
"lib1","SARS-CoV-2","CATAGACCCATTTGCG",3,39.12,10.29,-0.47,0.09,2.81,1.01,0,">1 nonsynonymous","T3V D90Y",2
"lib1","SARS-CoV-2","CATAGACCCTACACTA",6,42.95,10.08,-0.68,0.09,2.77,1.02,0,">1 nonsynonymous","F44R A145S",2
"lib1","SARS-CoV-2","CATAGACCTTTCCCCC",5,92.29,9.73,-1.04,0.04,2.82,1.04,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","CATAGACGCTGCAAGA",6,130.46,10.65,-0.11,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGACGTATCTGAA",4,42.84,10.64,-0.13,0.06,2.83,1.14,0,">1 nonsynonymous","I2S N120M",2
"lib1","SARS-CoV-2","CATAGACTTATTGAAA",4,18.81,10.93,0.16,0.1,2.81,1.1,0,"1 nonsynonymous","L188S",1
"lib1","SARS-CoV-2","CATAGACTTGGAAGTT",3,26.26,11,0.24,0.13,2.89,1.02,0.01,"1 nonsynonymous","P149M",1
"lib1","SARS-CoV-2","CATAGAGAAACAGTAA",6,131.35,10.74,-0.03,0.07,2.81,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGAGTAGGGCCCG",3,38.97,6.34,-4.43,0.75,1.5,1.14,0.04,">1 nonsynonymous","D90L P177T",2
"lib1","SARS-CoV-2","CATAGAGTGCATCTAC",1,29.79,10.33,-0.43,0.07,2.74,1.03,0,">1 nonsynonymous","P7G K56C",2
"lib1","SARS-CoV-2","CATAGATAAAACGTGA",1,97.06,9.73,-1.03,0.06,2.72,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGATAGCTCATCC",7,56.4,10,-0.77,0.1,2.2,1.1,0,">1 nonsynonymous","S45W I104L",2
"lib1","SARS-CoV-2","CATAGATCGCTTTCCC",9,306.31,6.34,-4.43,0.34,1.5,1.14,0.01,"1 nonsynonymous","Y175G",1
"lib1","SARS-CoV-2","CATAGATGAAAAGTTG",1,22.56,10.62,-0.15,0.07,2.89,1.1,0,">1 nonsynonymous","F8I T46H",2
"lib1","SARS-CoV-2","CATAGATGCAGAAGGG",5,82.69,10.86,0.1,0.07,2.93,1.04,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","CATAGATTCTAAATAA",4,38.4,10.81,0.04,0.06,2.89,1.07,0,">1 nonsynonymous","S43M Q168F",2
"lib1","SARS-CoV-2","CATAGCAACCAAGAAC",4,9.41,6.07,-4.7,1.11,1.5,1.19,0.03,">1 nonsynonymous","T3P R136D P149H K198T",4
"lib1","SARS-CoV-2","CATAGCACAGAGCCTT",4,686.76,10.01,-0.75,0.05,2.59,1.01,0,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","CATAGCACCAAACTAT",5,42.77,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2L Y93D A105D",3
"lib1","SARS-CoV-2","CATAGCACCGTTTCAT",3,30.35,9.87,-0.89,0.12,2.22,1.04,0.01,">1 nonsynonymous","N1L C6W",2
"lib1","SARS-CoV-2","CATAGCACGAAAGATA",1,46.14,10.03,-0.74,0.06,2.91,1.01,0,">1 nonsynonymous","K87S Y123S",2
"lib1","SARS-CoV-2","CATAGCAGGACCCTGT",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R I88L K94Y F99I T201P",5
"lib1","SARS-CoV-2","CATAGCAGGACGTTAC",1,34.93,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","Y143S E154V G172D T201S",4
"lib1","SARS-CoV-2","CATAGCAGGCTAGTTT",9,348.26,10.76,-0.01,0.05,2.93,1.03,0,">1 nonsynonymous","R16S K128T V153S",3
"lib1","SARS-CoV-2","CATAGCAGTGAGTAAA",6,72.34,9.97,-0.79,0.08,2.09,1.05,0,">1 nonsynonymous","N1R F12L V52A",3
"lib1","SARS-CoV-2","CATAGCCAAACATATG",5,106.42,9.76,-1,0.08,2.14,1.06,0,">1 nonsynonymous","G86S N120D",2
"lib1","SARS-CoV-2","CATAGCCATTCACCAA",1,22.48,8.99,-1.77,0.17,2.84,1.15,0.01,">1 nonsynonymous","A33F P96S G117Y",3
"lib1","SARS-CoV-2","CATAGCCGCTATTTCA",2,13.19,7.17,-3.59,0.57,1.5,1.05,0.05,">1 nonsynonymous","K56R S113W R136I",3
"lib1","SARS-CoV-2","CATAGCCTAGAATACC",6,58.82,6.79,-3.98,0.24,1.5,1.13,0.01,">1 nonsynonymous","R127I V153D",2
"lib1","SARS-CoV-2","CATAGCGAACTCTTGT",8,214.72,9.62,-1.14,0.08,2.74,1.11,0,">1 nonsynonymous","K87H N120T",2
"lib1","SARS-CoV-2","CATAGCGCATAACAGC",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150Y L162D",2
"lib1","SARS-CoV-2","CATAGCGTAAGGTCAT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","G86R Y119P E135* F156A",4
"lib1","SARS-CoV-2","CATAGCTGTTCGACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","C61A P82* Q176S",3
"lib1","SARS-CoV-2","CATAGCTTCAAGCAAT",2,8.04,NA,NA,NA,NA,NA,NA,"stop","I28* A33K Y175I",3
"lib1","SARS-CoV-2","CATAGCTTCCATAATA",9,5.82,NA,NA,NA,NA,NA,NA,"stop","L57* C150*",2
"lib1","SARS-CoV-2","CATAGGAAATGATACA",4,151.88,10.11,-0.65,0.05,2.8,1.01,0,">1 nonsynonymous","G9S D34P S43N",3
"lib1","SARS-CoV-2","CATAGGAATATCTGAG",4,5.25,NA,NA,NA,NA,NA,NA,"stop","N13S C49* N64A D90E P96G N120F",6
"lib1","SARS-CoV-2","CATAGGACACTGAAAG",2,42.1,9.65,-1.11,0.37,1.56,1.06,0.06,">1 nonsynonymous","N107K F167S",2
"lib1","SARS-CoV-2","CATAGGACGAAAAAGA",2,58.19,10.7,-0.07,0.05,2.89,1.03,0,">1 nonsynonymous","T3H I142F N171T",3
"lib1","SARS-CoV-2","CATAGGAGTAAAGGTA",7,61.98,10.72,-0.04,0.05,2.95,1.01,0,"1 nonsynonymous","T55F",1
"lib1","SARS-CoV-2","CATAGGCAAAGCCGAT",2,53.96,10.28,-0.49,0.07,2.71,1,0,"1 nonsynonymous","Y35D",1
"lib1","SARS-CoV-2","CATAGGCAATTAACCT",3,18.11,10.56,-0.21,0.1,2.9,1.07,0,"1 nonsynonymous","S36W",1
"lib1","SARS-CoV-2","CATAGGCATCTCTGCC",2,21.93,8.58,-2.18,0.17,2.32,1.11,0.02,"1 nonsynonymous","G146I",1
"lib1","SARS-CoV-2","CATAGGCCAAGATTAT",1,6.72,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F62R P82Q N157D Y165V",4
"lib1","SARS-CoV-2","CATAGGCGAAAAAAGC",3,67.94,10.72,-0.04,0.03,2.95,1,0,"1 nonsynonymous","P149M",1
"lib1","SARS-CoV-2","CATAGGCGTCCTCCCT",1,4.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","H189I",1
"lib1","SARS-CoV-2","CATAGGGAAAATAAAG",3,41.25,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A33E G172E",2
"lib1","SARS-CoV-2","CATAGGGAATTTTCCA",2,140.84,8.94,-1.82,0.1,1.97,1.12,0,">1 nonsynonymous","R78D G86A",2
"lib1","SARS-CoV-2","CATAGGTACCAAAACG",10,116.1,10.83,0.07,0.06,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CATAGGTACTGTATCA",2,15.99,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","Y93K N118L F126L",3
"lib1","SARS-CoV-2","CATAGGTCTGATGCTA",4,36.32,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R27G G101V A105C P133Y",4
"lib1","SARS-CoV-2","CATAGGTCTTATTAAG",2,43.32,10.62,-0.15,0.12,2.76,1.01,0.01,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","CATAGGTGCCAGTTTG",2,24.04,10.71,-0.05,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGTAAAACGTTAA",2,33.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A18G P82L Y119S",3
"lib1","SARS-CoV-2","CATAGTAAGTACGACT",7,126.75,7.64,-3.12,0.19,1.5,1.05,0.01,">1 nonsynonymous","N120T L162T",2
"lib1","SARS-CoV-2","CATAGTAATTCAACAA",8,43.44,6.08,-4.69,0.91,1.5,1.18,0.02,">1 nonsynonymous","N4L G86P P96E L122W L162A",5
"lib1","SARS-CoV-2","CATAGTACAAATTTAG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","R27* C49Y V103L",3
"lib1","SARS-CoV-2","CATAGTACGTTCGGCA",1,10.04,10.04,-0.73,0.21,2.61,1.09,0.02,">1 nonsynonymous","A14T S41V",2
"lib1","SARS-CoV-2","CATAGTACTACTACAG",9,254.91,10.75,-0.01,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATAGTAGAAGATGAC",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66S A89L P96L L111S",4
"lib1","SARS-CoV-2","CATAGTAGTAATTAAT",4,28.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11W Y91I I142R F167R V181L",5
"lib1","SARS-CoV-2","CATAGTATCAGATGAT",1,8.35,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","A14P G83R N118Y Y143I",4
"lib1","SARS-CoV-2","CATAGTATCCAGTACG",5,71.87,10.73,-0.03,0.07,2.89,1.05,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","CATAGTATCTAGGGAC",1,8.83,6,-4.76,2,3,1.06,0,">1 nonsynonymous","L60K L95S",2
"lib1","SARS-CoV-2","CATAGTATGAATAAAA",3,76.6,8.39,-2.37,0.14,2.84,1.05,0.01,">1 nonsynonymous","G166F G174A C195N",3
"lib1","SARS-CoV-2","CATAGTCAATATAAAT",2,44.13,10.43,-0.33,0.05,2.87,1.02,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","CATAGTCAGACCCCCG",1,18.47,8.14,-2.62,0.35,1.71,1.3,0.06,">1 nonsynonymous","I2K G9T N171C Q176A T201L",5
"lib1","SARS-CoV-2","CATAGTCCCAAAAATA",3,45.25,9,-1.76,0.23,1.58,1.14,0.02,">1 nonsynonymous","G86M P197R",2
"lib1","SARS-CoV-2","CATAGTCCCCCGATAG",3,83.91,10.75,-0.01,0.06,2.92,1.04,0,">1 nonsynonymous","S53A Q163T",2
"lib1","SARS-CoV-2","CATAGTCCCGTTTCGG",3,0,NA,NA,NA,NA,NA,NA,"stop","R25N Y123*",2
"lib1","SARS-CoV-2","CATAGTCTACATAAGG",1,43.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L60A P133G C150N S184L",4
"lib1","SARS-CoV-2","CATAGTGAAGGAGATG",3,8.56,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","K94L R124N",2
"lib1","SARS-CoV-2","CATAGTGAATGTAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D D75P K128T E154P L183K",5
"lib1","SARS-CoV-2","CATAGTGAGTGTACTA",4,30.46,10.26,-0.51,0.12,2.77,1,0.01,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","CATAGTGTTGGATGTT",1,16.38,9.27,-1.5,0.22,1.6,1.16,0.03,">1 nonsynonymous","C6W K56P",2
"lib1","SARS-CoV-2","CATAGTTAATACGGTC",1,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","CATAGTTACACAAGAC",2,13.31,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3Q D90I Y119M R127T",4
"lib1","SARS-CoV-2","CATAGTTTACGACACT",1,55.47,10.72,-0.04,0.05,2.97,1.03,0,">1 nonsynonymous","L5W G51R",2
"lib1","SARS-CoV-2","CATAGTTTCTAATTAG",1,28.14,8.55,-2.21,0.32,1.5,1.01,0.04,">1 nonsynonymous","S19L Y39M E154S",3
"lib1","SARS-CoV-2","CATATAAAAACTAGCT",2,18.75,10.65,-0.11,0.04,2.95,1.05,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","CATATAAAAAGTAAAG",8,106.56,10.28,-0.49,0.03,2.91,1.03,0,">1 nonsynonymous","S41V T46D",2
"lib1","SARS-CoV-2","CATATAAACAATATCC",5,34.82,9.82,-0.95,0.16,1.83,1.09,0.01,">1 nonsynonymous","N64T V173T",2
"lib1","SARS-CoV-2","CATATAAACATATGCA",1,46.46,10.64,-0.13,0.05,2.98,1,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","CATATAAACCTTTCTA",2,211.36,10.51,-0.25,0.04,2.92,1.03,0,">1 nonsynonymous","T63G L183I",2
"lib1","SARS-CoV-2","CATATAAACTGTAAAA",3,2.25,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","CATATAAAGATAAGTA",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V Y91I A105F P149Y L162V F167I",6
"lib1","SARS-CoV-2","CATATAAAGATTTTTA",4,98.11,9.11,-1.66,0.09,2.75,1.15,0,">1 nonsynonymous","Y35D T55S D59E L125P",4
"lib1","SARS-CoV-2","CATATAAATCCAACAA",2,11.7,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","T3R G74F D97N Y119T F126W P133S E141K T201G",8
"lib1","SARS-CoV-2","CATATAACAGACATAT",5,9.02,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C6I L57F D90Y L122P E135V",5
"lib1","SARS-CoV-2","CATATAACATCCCATA",2,26.8,8.37,-2.4,0.24,1.7,1.16,0.02,">1 nonsynonymous","I28E T55C L125S",3
"lib1","SARS-CoV-2","CATATAACCCCCCAAA",4,35.65,6.61,-4.16,0.49,1.5,1.15,0.03,">1 nonsynonymous","Y91M N107P D112H Y119C",4
"lib1","SARS-CoV-2","CATATAACGCGCTCCA",1,5.84,9.83,-0.93,0.2,2.5,1.03,0.01,">1 nonsynonymous","T15Q D59Q F185L",3
"lib1","SARS-CoV-2","CATATAACGTACATGC",1,35.66,8.57,-2.19,0.18,1.96,1.22,0.01,"1 nonsynonymous","G74L",1
"lib1","SARS-CoV-2","CATATAACGTGAATTC",2,23.72,10.69,-0.07,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CATATAAGACGGGTGT",5,39.05,6.22,-4.54,0.56,1.5,1.15,0.01,">1 nonsynonymous","D59T F160I V180Q",3
"lib1","SARS-CoV-2","CATATAAGATAAGAAA",8,51.88,10.73,-0.03,0.09,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATATAAGATTTGAAC",1,25.66,10.88,0.12,0.09,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CATATAAGCAAAGAGA",6,54.66,6,-4.76,1.05,1.5,1.14,0.01,">1 nonsynonymous","L5R S53R L60Y Y119S F134P",5
"lib1","SARS-CoV-2","CATATAAGCAATGTCG",3,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R L38R V103I S129L P197F",5
"lib1","SARS-CoV-2","CATATAAGGATAGCTA",8,122.19,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2G D68L S139C A145P L187V",5
"lib1","SARS-CoV-2","CATATAAGGCAAAAAA",3,18.37,9.83,-0.94,0.2,2.25,1.06,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","CATATAATAAACCACA",11,337.79,10.01,-0.75,0.06,2.35,1.04,0,">1 nonsynonymous","K56V D90G",2
"lib1","SARS-CoV-2","CATATAATAACTTAGT",6,52.01,6.46,-4.31,0.67,1.5,1.23,0.04,">1 nonsynonymous","A67L Y91T P161G",3
"lib1","SARS-CoV-2","CATATAATATATAAAT",2,37.48,7.4,-3.36,0.3,1.5,1.18,0.03,">1 nonsynonymous","I2S I28W Y35R P54T T170S Y175C",6
"lib1","SARS-CoV-2","CATATAATATTCTTTA",3,153.58,10.81,0.05,0.07,2.9,1.07,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","CATATAATCAAAAGTA",2,30.89,10.19,-0.58,0.07,2.85,1,0,">1 nonsynonymous","N40A D98F",2
"lib1","SARS-CoV-2","CATATAATTAAATAGG",2,121.54,9.2,-1.56,0.07,2.85,1.09,0,">1 nonsynonymous","V37K Y119D K132C A190S",4
"lib1","SARS-CoV-2","CATATAATTGTGGTTA",7,0.63,NA,NA,NA,NA,NA,NA,"stop","P7L K114* K132R G146V",4
"lib1","SARS-CoV-2","CATATACAACAAAATT",4,9.8,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N1R C61W I88Q G155V",4
"lib1","SARS-CoV-2","CATATACAACCCGTAT",6,42.7,10.59,-0.17,0.1,2.65,1.02,0,">1 nonsynonymous","V37S Y123L P149T",3
"lib1","SARS-CoV-2","CATATACAATGGGGTA",3,89.52,10.62,-0.14,0.05,2.87,1.08,0,">1 nonsynonymous","F160P L187F",2
"lib1","SARS-CoV-2","CATATACACGTGTATG",2,54.44,10.38,-0.39,0.05,2.83,1.06,0,"1 nonsynonymous","F185I",1
"lib1","SARS-CoV-2","CATATACATCCAACCT",5,58.07,6,-4.76,1.58,3,1.2,0.01,">1 nonsynonymous","Y91D G152T G196S",3
"lib1","SARS-CoV-2","CATATACATCGTTTAA",2,53.09,9.78,-0.98,0.13,2.43,1.08,0.01,">1 nonsynonymous","Y35K G116K",2
"lib1","SARS-CoV-2","CATATACATGCTTACA",10,154.03,10.32,-0.44,0.05,2.84,1.03,0,">1 nonsynonymous","T15A G146A",2
"lib1","SARS-CoV-2","CATATACGCGAAACTC",2,13.69,10.68,-0.08,0.16,2.71,1,0.01,">1 nonsynonymous","K56L V103I",2
"lib1","SARS-CoV-2","CATATAGAAACTCTAC",3,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y F99L",2
"lib1","SARS-CoV-2","CATATAGAATAATATG",6,77.28,9.24,-1.53,0.07,2.83,1.1,0,">1 nonsynonymous","S113T G116T",2
"lib1","SARS-CoV-2","CATATAGCTGTAATCA",4,50.55,10.8,0.04,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CATATAGGAACAAACA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","N58H G83N Y91* D98K N107S N120S G174K",7
"lib1","SARS-CoV-2","CATATAGGAGAGCCTT",9,92.06,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F8V V20A L95S R127F A190E",5
"lib1","SARS-CoV-2","CATATAGGAGTCCCGG",4,2.18,NA,NA,NA,NA,NA,NA,"stop","V20A I28Q I104N L162*",4
"lib1","SARS-CoV-2","CATATAGGTGATTTAC",1,16.63,10.67,-0.09,0.06,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CATATAGTTCCACTAC",4,51.38,10.66,-0.1,0.05,2.89,1.05,0,">1 nonsynonymous","V37Y S164Y",2
"lib1","SARS-CoV-2","CATATATAAAGAACAA",1,30.88,8.23,-2.54,0.16,2.81,1.06,0.01,"1 nonsynonymous","N171D",1
"lib1","SARS-CoV-2","CATATATAAATCATTG",6,88.45,10.78,0.01,0.08,2.93,1.04,0,">1 nonsynonymous","S43K K132G",2
"lib1","SARS-CoV-2","CATATATCATAGTACA",1,13.84,6,-4.76,1.54,1.5,1.22,0.01,">1 nonsynonymous","E10G S19M Y35H L111S",4
"lib1","SARS-CoV-2","CATATATGGGTTAAAA",2,52.41,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N4I R27A V103S",3
"lib1","SARS-CoV-2","CATATATGTTCCGATG",5,13.24,6,-4.76,1.95,3,1.2,0.01,">1 nonsynonymous","T63D I104A D112P D137P E154M",5
"lib1","SARS-CoV-2","CATATATTAGAATTCG",8,24.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15Y K114G P149H E154I L162E Y175S",6
"lib1","SARS-CoV-2","CATATATTCATTCACA",4,2.08,NA,NA,NA,NA,NA,NA,"stop","T15* S43T A105H S139M F156W L188A G196*",7
"lib1","SARS-CoV-2","CATATATTCCGCATCC",5,19.91,9.72,-1.05,0.18,1.74,1.16,0.02,">1 nonsynonymous","A33K E186I",2
"lib1","SARS-CoV-2","CATATATTCGAAACCT",5,46.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12N S53F G86I L122R G152V L162K Y175Q",7
"lib1","SARS-CoV-2","CATATCAAAGAAGCAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44W C49V N58I G74A T100N F160D S200Q",7
"lib1","SARS-CoV-2","CATATCAAGACTAAAA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134A V173I",2
"lib1","SARS-CoV-2","CATATCAATATCAAAT",5,2.03,NA,NA,NA,NA,NA,NA,"stop","Y35F N107*",2
"lib1","SARS-CoV-2","CATATCAATCGACTCT",6,133.37,10.37,-0.4,0.04,2.95,1.01,0,">1 nonsynonymous","T85A Y121L",2
"lib1","SARS-CoV-2","CATATCAATGAAAAAA",2,18.1,9.35,-1.41,0.09,2.91,1.04,0,">1 nonsynonymous","L60R Y119G",2
"lib1","SARS-CoV-2","CATATCAGATAATCAA",4,48.09,9.21,-1.55,0.14,1.5,1.1,0.01,">1 nonsynonymous","Y123K L131A K199N",3
"lib1","SARS-CoV-2","CATATCAGCCAAAAAA",8,8.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3V S41V F70L L131R C158T H189R",6
"lib1","SARS-CoV-2","CATATCATAATACTGG",6,91.79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18L S108I Y143E",3
"lib1","SARS-CoV-2","CATATCATACACAACC",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S G51L",2
"lib1","SARS-CoV-2","CATATCATATAGAACC",5,46.9,10.69,-0.08,0.05,2.89,1.01,0,">1 nonsynonymous","I2F I138S",2
"lib1","SARS-CoV-2","CATATCCAACCCATAA",1,10.9,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","S36W T85M C102R N120S P169L",5
"lib1","SARS-CoV-2","CATATCCAACTGTGAT",1,15.21,10.56,-0.2,0.16,2.46,1,0.01,">1 nonsynonymous","A14V L38M",2
"lib1","SARS-CoV-2","CATATCCCGCAAGGGA",1,27.92,6,-4.76,1.67,1.5,1.25,0.06,">1 nonsynonymous","I2N K132V F167A",3
"lib1","SARS-CoV-2","CATATCCGAAATTCGA",5,29.69,6,-4.76,2,3,1.11,0,">1 nonsynonymous","T46P R73L N157G",3
"lib1","SARS-CoV-2","CATATCCGATTTATAA",5,58.72,8.09,-2.67,0.26,1.5,1.17,0.02,">1 nonsynonymous","S41R V52N S129P",3
"lib1","SARS-CoV-2","CATATCCGGTTTTGGA",2,22.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L W23P G146L",3
"lib1","SARS-CoV-2","CATATCCTAAGTTGTG",4,17.76,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y91L L122V P161Y F185V",4
"lib1","SARS-CoV-2","CATATCGAAATATAGG",4,353.49,10.65,-0.12,0.03,2.91,1.03,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","CATATCGAGAGATTTT",2,10.14,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15E R124N",2
"lib1","SARS-CoV-2","CATATCGAGGCAAACA",6,0.93,NA,NA,NA,NA,NA,NA,"stop","C6Y D34I Y91A F99*",4
"lib1","SARS-CoV-2","CATATCGCAAATTGAT",1,8.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103L R127S C158E",3
"lib1","SARS-CoV-2","CATATCGCACAGAAAG",7,67.16,10.22,-0.54,0.07,2.79,1.03,0,"1 nonsynonymous","Y50H",1
"lib1","SARS-CoV-2","CATATCGCCAACAATC",10,114.2,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A14L S53P Y66H I72M T140P",5
"lib1","SARS-CoV-2","CATATCGGTAAATGAG",8,16.65,6.17,-4.6,1.48,1.59,1.19,0.05,">1 nonsynonymous","D97Y F99I D137V",3
"lib1","SARS-CoV-2","CATATCGTAAGCGGGA",6,183.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4C Y39C S69G N92V",4
"lib1","SARS-CoV-2","CATATCGTGAGTGTCA",2,53.92,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9M Y123C K132I C158P",4
"lib1","SARS-CoV-2","CATATCTAGATAGTCG",2,36.03,9.16,-1.6,0.12,2.34,1.06,0.01,">1 nonsynonymous","N107I P197R",2
"lib1","SARS-CoV-2","CATATCTATAACGCCG",1,41.03,10.78,0.01,0.07,2.9,1.02,0,">1 nonsynonymous","V37S D90L Q163K",3
"lib1","SARS-CoV-2","CATATCTATACCTGAG",2,1216.59,10.3,-0.47,0.02,2.89,1.03,0,">1 nonsynonymous","C61G I138N",2
"lib1","SARS-CoV-2","CATATCTTGCTCGAAT",6,138.69,10.77,0,0.04,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CATATGAAAAATTATA",6,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D C49I",2
"lib1","SARS-CoV-2","CATATGAAAGGATGAG",1,20.18,6.87,-3.89,0.38,1.5,1.07,0.03,">1 nonsynonymous","Y123D G146A",2
"lib1","SARS-CoV-2","CATATGAACCACTGCT",3,56.58,8.13,-2.63,0.15,2.21,1.16,0.01,">1 nonsynonymous","S113T G152V",2
"lib1","SARS-CoV-2","CATATGAGCATATTCA",3,0.58,NA,NA,NA,NA,NA,NA,"stop","C49* D112F",2
"lib1","SARS-CoV-2","CATATGAGGACACCAT",1,8.87,6.15,-4.61,2,3,1.17,0.01,">1 nonsynonymous","A33R Y39C V71S",3
"lib1","SARS-CoV-2","CATATGATCATACTAC",3,5.74,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F44L Y93N P149Y",3
"lib1","SARS-CoV-2","CATATGATCATCACAT",7,1495.11,10.7,-0.06,0.04,2.92,1.04,0,"1 nonsynonymous","V71I",1
"lib1","SARS-CoV-2","CATATGATTTGAAAAC",2,11.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N120Y C150S T170R",3
"lib1","SARS-CoV-2","CATATGCAAATATATA",5,47.81,10.83,0.07,0.06,2.9,1.04,0,"1 nonsynonymous","N110V",1
"lib1","SARS-CoV-2","CATATGCGCCATCATA",10,196.56,10.78,0.02,0.06,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATATGCGTAAACAAG",2,0.72,NA,NA,NA,NA,NA,NA,"stop","T100E K114S D137* P169E Y175K",5
"lib1","SARS-CoV-2","CATATGCTCACAAAAG",3,33.14,9.73,-1.03,0.18,2.22,1.14,0.01,">1 nonsynonymous","S43G P96Q",2
"lib1","SARS-CoV-2","CATATGCTTTGTATAT",5,154.71,10.23,-0.53,0.03,2.89,1.02,0,">1 nonsynonymous","I2C R16L A22H S36Q T55W",5
"lib1","SARS-CoV-2","CATATGGAAACATTCG",1,7.79,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23K N58Q N64H T85G I88D S113M R136A",7
"lib1","SARS-CoV-2","CATATGGAGTATAATT",7,44.28,10.56,-0.2,0.04,2.94,1,0,">1 nonsynonymous","L5V C61S F160P",3
"lib1","SARS-CoV-2","CATATGGCTGTTAGGA",11,144.38,8.09,-2.67,0.22,1.5,1.19,0.02,">1 nonsynonymous","T15V Y39I K56R T148E Y178R T201I",6
"lib1","SARS-CoV-2","CATATGGGAATCAGAA",4,71.91,8.14,-2.63,0.19,1.5,1.1,0.01,">1 nonsynonymous","F12G I142Y",2
"lib1","SARS-CoV-2","CATATGTAAATTTACA",7,72.98,6,-4.76,1.11,1.5,1.17,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CATATGTATATACACC",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88R N171Y",2
"lib1","SARS-CoV-2","CATATGTGTAAGAATG",11,162.6,10.38,-0.39,0.03,2.88,1.01,0,"1 nonsynonymous","N107C",1
"lib1","SARS-CoV-2","CATATGTGTATACCGG",4,0.69,NA,NA,NA,NA,NA,NA,"stop","G86* D97W K114V",3
"lib1","SARS-CoV-2","CATATTAAAATGGACT",2,21.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4I V20E Y39N T63P L95T C102I",6
"lib1","SARS-CoV-2","CATATTAAACTCCGTA",5,1.44,NA,NA,NA,NA,NA,NA,"stop","T15N N107A G116Y Y119*",4
"lib1","SARS-CoV-2","CATATTAACAATTGAC",1,42.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41H P177M",2
"lib1","SARS-CoV-2","CATATTAACCTAAAAG",3,120.88,10.16,-0.6,0.06,2.82,1,0,"1 nonsynonymous","T46G",1
"lib1","SARS-CoV-2","CATATTAAGATAACAA",3,7.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G101N N120A I138L G166L",4
"lib1","SARS-CoV-2","CATATTAATACAGTTC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","CATATTAATTATTTCA",3,32.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I D98M P191F",3
"lib1","SARS-CoV-2","CATATTACACGTCAAC",1,15.33,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13S Y91S G101M F156T",4
"lib1","SARS-CoV-2","CATATTACGCAGACTA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","N13K L122* R136N",3
"lib1","SARS-CoV-2","CATATTAGATTCAGCA",3,53.73,10.19,-0.57,0.11,2.67,1,0.01,">1 nonsynonymous","R27L S43L Y50H",3
"lib1","SARS-CoV-2","CATATTAGGTAACTGA",6,49.39,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6F I28R Y39L I88W P169L",5
"lib1","SARS-CoV-2","CATATTATAATTACCC",3,27.33,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C31P L57E Y121R",3
"lib1","SARS-CoV-2","CATATTATAGAAATAT",3,63.1,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4S G172R",2
"lib1","SARS-CoV-2","CATATTATATAGCAAC",4,22.91,9.86,-0.9,0.08,2,1.03,0,">1 nonsynonymous","N64W D98I P191F",3
"lib1","SARS-CoV-2","CATATTATCAGCTATT",4,82.4,10.75,-0.01,0.05,2.96,1.03,0,"1 nonsynonymous","Q84G",1
"lib1","SARS-CoV-2","CATATTATGACATATA",1,183.35,9.97,-0.79,0.08,2.36,1.06,0,">1 nonsynonymous","G9N F44S F62S",3
"lib1","SARS-CoV-2","CATATTCACCATGCCA",4,9.31,7.12,-3.64,0.6,1.5,1,0.08,">1 nonsynonymous","C49A P82R D112A G174F",4
"lib1","SARS-CoV-2","CATATTCACTTTTTAC",3,41.46,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y121E Y175S",2
"lib1","SARS-CoV-2","CATATTCGAACTGTGG",4,64.47,10.75,-0.01,0.03,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CATATTCGCGAATGCA",5,53.95,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6A A89E P149S V153L",4
"lib1","SARS-CoV-2","CATATTCGTGACAGAG",4,43.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5E N30S F99R S147Y F156R",5
"lib1","SARS-CoV-2","CATATTCGTTACTTAC",4,2171.81,10.07,-0.7,0.06,2.48,1.01,0,">1 nonsynonymous","L60V E135K",2
"lib1","SARS-CoV-2","CATATTCTGGTGAGTG",6,79.09,8.69,-2.07,0.2,1.77,1.19,0.02,">1 nonsynonymous","R73L A81S",2
"lib1","SARS-CoV-2","CATATTGAAAAGTTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* G83V D97I D112Y",4
"lib1","SARS-CoV-2","CATATTGATACACAGG",4,99.11,6.03,-4.73,0.6,1.5,1.16,0.01,">1 nonsynonymous","L95E Q176R",2
"lib1","SARS-CoV-2","CATATTGCATTTCCAT",10,53.33,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V77W A89D",2
"lib1","SARS-CoV-2","CATATTGGATGAACGA",8,143.23,6,-4.76,0.74,1.5,1.14,0.01,">1 nonsynonymous","C31T A42W N157L",3
"lib1","SARS-CoV-2","CATATTGTAAAGCTAA",5,45.1,6.66,-4.11,0.46,1.52,1.18,0.02,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","CATATTTAAGTAAAGA",4,22.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2L D59K P82R",3
"lib1","SARS-CoV-2","CATATTTACAATGCTA",4,67.76,10.74,-0.02,0.06,2.84,1.09,0,"1 nonsynonymous","K198D",1
"lib1","SARS-CoV-2","CATATTTACGGAGAAC",1,22.66,9.36,-1.4,0.15,2.74,1.14,0.01,">1 nonsynonymous","G117I P149S P197S",3
"lib1","SARS-CoV-2","CATATTTACTAGAGAA",10,74.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V32E K48W D112V",3
"lib1","SARS-CoV-2","CATATTTAGGACTTAT",8,45.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13H K48C N107S P177L",4
"lib1","SARS-CoV-2","CATATTTCTCAATGAA",1,7.8,9.06,-1.71,0.1,2.11,1.17,0,">1 nonsynonymous","F12G R78A T148K",3
"lib1","SARS-CoV-2","CATATTTCTTCGTGAT",10,87.3,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I28V S36R C49P V181W",4
"lib1","SARS-CoV-2","CATATTTTAGATCTGC",1,47.33,10.73,-0.04,0.05,2.94,1,0,">1 nonsynonymous","A42G T55L D90L",3
"lib1","SARS-CoV-2","CATATTTTATTAATTA",1,27.98,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","A67N G146K P169R",3
"lib1","SARS-CoV-2","CATATTTTTCGACTTT",7,119.94,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L125G G155Q Y159S",3
"lib1","SARS-CoV-2","CATATTTTTTTGGTAG",5,41.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T D97T F134D",3
"lib1","SARS-CoV-2","CATCAAAAAAGGGATT",1,45.07,10.15,-0.62,0.04,2.76,1.03,0,">1 nonsynonymous","N130G Q144T K199F",3
"lib1","SARS-CoV-2","CATCAAAAAATCTAAT",4,153.53,8.7,-2.06,0.1,2.85,1.08,0,">1 nonsynonymous","S36D S113Q",2
"lib1","SARS-CoV-2","CATCAAAAATTTCTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","G116C G146* H189Y",3
"lib1","SARS-CoV-2","CATCAAAAGATTCGCG",1,18.57,9.69,-1.08,0.25,1.71,1.24,0.04,">1 nonsynonymous","T46G Y66Q",2
"lib1","SARS-CoV-2","CATCAAAAGCAAAATT",3,21.19,8.21,-2.56,0.3,1.52,1.08,0.04,">1 nonsynonymous","S41T F47R D98L",3
"lib1","SARS-CoV-2","CATCAAAAGCCTCAGT",2,14.81,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T55I C61A E141L V153S Y175L",5
"lib1","SARS-CoV-2","CATCAAAATAATACTT",5,122.62,10.53,-0.24,0.04,2.91,1.03,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","CATCAAAATGCTTGTA",5,25.42,7.73,-3.03,0.44,1.5,1,0.05,">1 nonsynonymous","S69L E135N",2
"lib1","SARS-CoV-2","CATCAAACAACCAAGA",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K N4K S45A R73K N107C",5
"lib1","SARS-CoV-2","CATCAAACACACTTCA",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Q G166T",2
"lib1","SARS-CoV-2","CATCAAACACCACGTG",3,39.15,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","P54R C61T G86V F99L N120T",5
"lib1","SARS-CoV-2","CATCAAACCACTCTTA",3,203.3,8.15,-2.61,0.18,2.12,1.15,0.01,"1 nonsynonymous","Y175K",1
"lib1","SARS-CoV-2","CATCAAACCCATGCAC",2,6.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58T C102E D137T F156S",4
"lib1","SARS-CoV-2","CATCAAACCTGGTCCA",2,34.56,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","W23R F44W G51S L60S G86C",5
"lib1","SARS-CoV-2","CATCAAACTGAGTTAT",4,0,NA,NA,NA,NA,NA,NA,"stop","P82E T85K W106R L122*",4
"lib1","SARS-CoV-2","CATCAAAGACAAATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S139L N157* F185K",3
"lib1","SARS-CoV-2","CATCAAAGATATATGT",14,281.46,10.11,-0.65,0.04,2.82,1.01,0,">1 nonsynonymous","V32T S41V K48E K56A Y143H",5
"lib1","SARS-CoV-2","CATCAAATAATAACCC",2,61.18,10.77,0,0.03,2.98,1,0,"1 nonsynonymous","N64G",1
"lib1","SARS-CoV-2","CATCAAATAGTGGGTG",2,3.72,NA,NA,NA,NA,NA,NA,"stop","G51C F134Y G146*",3
"lib1","SARS-CoV-2","CATCAAATTCCAAGGA",1,39.6,10.08,-0.69,0.06,2.92,1,0,">1 nonsynonymous","G155V T201S",2
"lib1","SARS-CoV-2","CATCAAATTCTAAACA",3,0.21,NA,NA,NA,NA,NA,NA,"stop","K56V D68* K87E Y91S K128A",5
"lib1","SARS-CoV-2","CATCAACAACTTCAAA",6,2.62,NA,NA,NA,NA,NA,NA,"stop","W23Q V52* G166P S184E",4
"lib1","SARS-CoV-2","CATCAACAATACAACG",1,35.66,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F126S I142S F167P V181C",4
"lib1","SARS-CoV-2","CATCAACAGAGAACGG",8,312.12,10.78,0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCAACATGGTGGCC",1,13.19,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F12S R124G",2
"lib1","SARS-CoV-2","CATCAACATTCCACCC",1,5.04,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","I2N G9S R16V G117D R127Y R136V",6
"lib1","SARS-CoV-2","CATCAACCCATGATAA",11,1.24,NA,NA,NA,NA,NA,NA,"stop","C6P Y35M S69V K87Y N92G Y175*",6
"lib1","SARS-CoV-2","CATCAACCCGTAATGC",4,34,10.21,-0.56,0.1,2.67,1,0.01,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","CATCAACCGTATGAAT",10,31.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6H G101S I104A F156Q",4
"lib1","SARS-CoV-2","CATCAACGATCAAAGT",1,0.67,NA,NA,NA,NA,NA,NA,"stop","P82H K94L L111S E135H S200*",5
"lib1","SARS-CoV-2","CATCAACGCTGACGTA",2,80.95,10.46,-0.3,0.07,2.94,1.02,0,"1 nonsynonymous","V52W",1
"lib1","SARS-CoV-2","CATCAACGGAGAATGA",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N A33Y L60C P96F A105W L122K F167C",7
"lib1","SARS-CoV-2","CATCAACTAACCCTCG",3,179.84,10.16,-0.6,0.05,2.74,1.02,0,">1 nonsynonymous","Y91I P149T",2
"lib1","SARS-CoV-2","CATCAACTACTGCATA",4,144.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4A C49M N64L N107R L131S E135G P177D",7
"lib1","SARS-CoV-2","CATCAAGAAACTGATT",3,90.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K87E D112E Y121S E135T Q176G",5
"lib1","SARS-CoV-2","CATCAAGAACCATCGA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35M Y143F T201*",3
"lib1","SARS-CoV-2","CATCAAGAGGAATGCA",6,32.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T15L S36G D112S E135R N171K T201F",6
"lib1","SARS-CoV-2","CATCAAGGGTATATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L A89T P96L N120K",4
"lib1","SARS-CoV-2","CATCAAGGTATGCATC",2,52.76,10.58,-0.19,0.05,2.95,1,0,">1 nonsynonymous","S41L C61R",2
"lib1","SARS-CoV-2","CATCAAGTACATACCG",1,6.61,9.14,-1.62,0.32,1.61,1.07,0.04,">1 nonsynonymous","R127T L187M",2
"lib1","SARS-CoV-2","CATCAAGTCGATACAG",1,22.59,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G9D S19L V52D Y143N",4
"lib1","SARS-CoV-2","CATCAAGTGAATAAAA",1,135.3,10.82,0.05,0.09,2.91,1.06,0,"1 nonsynonymous","S36E",1
"lib1","SARS-CoV-2","CATCAATAAAATCCCC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","A42H L57* N130Q Y165L",4
"lib1","SARS-CoV-2","CATCAATAACATAAAG",2,38.54,10.86,0.09,0.07,2.92,1.03,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","CATCAATATAACACAA",1,5.58,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6V A33N G51R L60V K128F A145S S164W",7
"lib1","SARS-CoV-2","CATCAATATAATAACT",1,8.2,10.63,-0.14,0.12,2.83,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CATCAATCCCATCTGA",4,61.4,10.91,0.15,0.08,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCAATCCGATATGA",2,6.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N58R K94A T148V G174T",4
"lib1","SARS-CoV-2","CATCAATGAACCAGTC",2,40.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6Y C61V D68E G116S T170Q",5
"lib1","SARS-CoV-2","CATCAATTCAGAATCA",4,42.41,9.61,-1.15,0.23,1.5,1,0.02,">1 nonsynonymous","N40Q P96Q A105S",3
"lib1","SARS-CoV-2","CATCAATTGAGCCAAT",8,2.35,NA,NA,NA,NA,NA,NA,"stop","N1C S41C I88* Y119* V173C",5
"lib1","SARS-CoV-2","CATCAATTTACGGACC",1,46.32,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","G83W N92T L131Y Q176L",4
"lib1","SARS-CoV-2","CATCACAAAAACCCAC",7,5.45,NA,NA,NA,NA,NA,NA,"stop","G9M W23* F44S N64L A105S K199L",6
"lib1","SARS-CoV-2","CATCACACATGCTCAC",12,97.43,6.58,-4.19,0.55,1.5,1.14,0.03,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","CATCACAGATGACGCG",2,18.22,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F62S I104N E154Q",3
"lib1","SARS-CoV-2","CATCACATGATAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100F S113L",2
"lib1","SARS-CoV-2","CATCACATGCTCCAAA",4,96.69,10.56,-0.21,0.05,2.89,1.04,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","CATCACATGTCCTAAA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","C6* V71G K94* A105F N130Y I138F Y165L",7
"lib1","SARS-CoV-2","CATCACATTAAAAAGT",4,54.6,10.66,-0.1,0.05,2.87,1.08,0,"1 nonsynonymous","R16G",1
"lib1","SARS-CoV-2","CATCACCAAAGTTCCG",2,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17C D59S L131W",3
"lib1","SARS-CoV-2","CATCACCATGGGCAAA",1,6.39,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S36Y I72Y Q168C",3
"lib1","SARS-CoV-2","CATCACCCTGTTACAG",2,32.49,8.62,-2.14,0.25,1.5,1,0.02,">1 nonsynonymous","P7W S45D P96M",3
"lib1","SARS-CoV-2","CATCACCCTTCCCGTA",5,52.26,7.95,-2.82,0.28,1.5,1,0.03,">1 nonsynonymous","K48I N120M S139F V173G",4
"lib1","SARS-CoV-2","CATCACCCTTTCACCG",3,12.13,8.48,-2.29,0.3,1.5,1.12,0.03,">1 nonsynonymous","G9K A105L",2
"lib1","SARS-CoV-2","CATCACCGACAAAGAT",1,37.61,10.04,-0.72,0.06,2.86,1.04,0,">1 nonsynonymous","V37L K56C G174S G196W",4
"lib1","SARS-CoV-2","CATCACCGTGATCGCT",6,105.83,10.51,-0.26,0.05,2.91,1.04,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","CATCACCTACGGTTCA",2,22.94,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y119M L131R",2
"lib1","SARS-CoV-2","CATCACCTTTAGAGCC",3,198.29,10.63,-0.13,0.04,2.89,1.04,0,">1 nonsynonymous","A14S V173D",2
"lib1","SARS-CoV-2","CATCACGACCCTCATA",6,80.58,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I72F P177K",2
"lib1","SARS-CoV-2","CATCACGCACGGGAGC",2,39.45,10.07,-0.7,0.07,2.85,1.07,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","CATCACGCACTCTAAG",2,0.48,NA,NA,NA,NA,NA,NA,"stop","T46* A81T P197F",3
"lib1","SARS-CoV-2","CATCACGCTATAGGTG",2,13.25,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I72M N107I K198M",3
"lib1","SARS-CoV-2","CATCACGCTTGGCGAC",6,11.74,6.2,-4.57,0.86,1.5,1.11,0.03,">1 nonsynonymous","D90P D97G S200I",3
"lib1","SARS-CoV-2","CATCACGGAGGATCAC",3,1.04,NA,NA,NA,NA,NA,NA,"stop","R27L Y35* Y50M N64T F126S P133I F156S L188A P191G",9
"lib1","SARS-CoV-2","CATCACGTAAATCCTT",6,140.98,6,-4.76,0.9,3,1.15,0,">1 nonsynonymous","T15S D59S K94R Y143K",4
"lib1","SARS-CoV-2","CATCACGTAACAAATT",1,8.34,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N1L F167T",2
"lib1","SARS-CoV-2","CATCACGTGGTGATAG",3,28.86,10.11,-0.65,0.14,2.2,1.06,0,">1 nonsynonymous","K48T D98G N110F N120M T201R",5
"lib1","SARS-CoV-2","CATCACTGAAAAATCG",6,0.18,NA,NA,NA,NA,NA,NA,"stop","I2* P149F F160Y",3
"lib1","SARS-CoV-2","CATCACTGTAAAGGAA",9,163.76,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","Y39I Y50P",2
"lib1","SARS-CoV-2","CATCACTTACCTATAT",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R I28E L95S V194I",4
"lib1","SARS-CoV-2","CATCAGAACCATGAGG",1,13.94,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V11A D98I A105S L125P Q144I",5
"lib1","SARS-CoV-2","CATCAGAATATTCTGC",3,18.45,6,-4.76,2,3,1.33,0.02,">1 nonsynonymous","C31M Q84W N107Y Q168V P197T",5
"lib1","SARS-CoV-2","CATCAGACGCAAGTCG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","L5K N13W C49S A89N D97K V103K N120* F160L",8
"lib1","SARS-CoV-2","CATCAGATACCGGATA",3,74.14,9.25,-1.52,0.07,2.71,1.15,0,">1 nonsynonymous","S45L F126H",2
"lib1","SARS-CoV-2","CATCAGATTTAGAGAA",26,421.84,9.13,-1.63,0.04,2.88,1.06,0,">1 nonsynonymous","G9V L125S A145I",3
"lib1","SARS-CoV-2","CATCAGCAATACGATC",1,16.75,9.43,-1.33,0.18,2.24,1.2,0.01,">1 nonsynonymous","C6K N157A",2
"lib1","SARS-CoV-2","CATCAGCTATAATCCT",1,35.05,9.36,-1.4,0.08,2.71,1.07,0,">1 nonsynonymous","A42D K87E K132W",3
"lib1","SARS-CoV-2","CATCAGCTGACACCTT",3,1.13,NA,NA,NA,NA,NA,NA,"stop","N151T F156*",2
"lib1","SARS-CoV-2","CATCAGGACTAGTGTT",3,55.94,10.61,-0.15,0.05,2.85,1.11,0,">1 nonsynonymous","R27I P149S",2
"lib1","SARS-CoV-2","CATCAGGAGCTATAAA",7,25.17,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D90L T100L P149E G155S Q176L",5
"lib1","SARS-CoV-2","CATCAGGGCGGTCAAT",3,1.69,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CATCAGTAATAATCAT",7,134.55,10.79,0.03,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCAGTAGGTTCGAG",3,54.15,10.68,-0.08,0.06,2.91,1.05,0,"1 nonsynonymous","I138K",1
"lib1","SARS-CoV-2","CATCAGTCCGAATGCA",5,83.33,7.62,-3.14,0.15,1.5,1.12,0.01,">1 nonsynonymous","L60G Y143C A190L",3
"lib1","SARS-CoV-2","CATCAGTCGATAAAAA",7,56.37,9.18,-1.58,0.08,2.65,1.1,0,">1 nonsynonymous","C6W L60P K87I",3
"lib1","SARS-CoV-2","CATCAGTGATTAGAGC",4,314.98,9.59,-1.18,0.09,2.35,1.05,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","CATCAGTTAAATTCCA",3,101.66,8.77,-1.99,0.13,2.09,1.14,0.01,">1 nonsynonymous","E10L N151I P169N",3
"lib1","SARS-CoV-2","CATCATAAATAAAGCA",2,20.45,9.93,-0.83,0.19,2.12,1,0.02,">1 nonsynonymous","Y35P E141W K198M",3
"lib1","SARS-CoV-2","CATCATAACAGAAAGC",2,7.65,10.63,-0.13,0.34,2.36,1,0.02,"1 nonsynonymous","V71A",1
"lib1","SARS-CoV-2","CATCATAACATATAAT",3,32.3,6.57,-4.19,0.42,1.5,1.12,0.02,">1 nonsynonymous","Q84H G86R H189S",3
"lib1","SARS-CoV-2","CATCATAAGGCTCGGT",1,6.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140A F167N T201D",3
"lib1","SARS-CoV-2","CATCATAATTCGTAGT",1,18.96,6.67,-4.1,0.26,1.5,1.08,0.01,">1 nonsynonymous","V37F N118S S139A G146I",4
"lib1","SARS-CoV-2","CATCATACAAACGTTT",1,11.78,8.8,-1.96,0.11,2.56,1.25,0.01,">1 nonsynonymous","G83C G117L",2
"lib1","SARS-CoV-2","CATCATACTTACCAGT",8,85.57,9.21,-1.56,0.09,2.01,1.14,0,">1 nonsynonymous","A14H C31Y V153G",3
"lib1","SARS-CoV-2","CATCATAGCACCAAAA",10,119.56,10.71,-0.05,0.05,2.91,1.05,0,">1 nonsynonymous","V65I L111W",2
"lib1","SARS-CoV-2","CATCATAGCTAATGCT",4,16.95,9.99,-0.77,0.1,2.8,1,0,">1 nonsynonymous","C6S S53R",2
"lib1","SARS-CoV-2","CATCATAGGAAGTCAT",2,20.88,6.27,-4.49,0.88,1.5,1.3,0.03,">1 nonsynonymous","D90Y C158V S200Y",3
"lib1","SARS-CoV-2","CATCATAGTTTTTAAC",6,14.76,6,-4.76,2,1.81,1.14,0.01,">1 nonsynonymous","D90M Y123S G155I P161A",4
"lib1","SARS-CoV-2","CATCATATAAGTGGGA",1,12.62,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G9M Y35L F44L D90T D137Y",5
"lib1","SARS-CoV-2","CATCATATTCAAATAG",7,87.63,9.16,-1.6,0.07,2.71,1.16,0,">1 nonsynonymous","V52L Y119L",2
"lib1","SARS-CoV-2","CATCATCAATGGTACA",7,57.42,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F47N T85R G146L G152T",4
"lib1","SARS-CoV-2","CATCATCATAAATACC",1,31.26,8.25,-2.51,0.16,2.36,1.07,0.01,"1 nonsynonymous","S113P",1
"lib1","SARS-CoV-2","CATCATCCATGAAATA",5,24.09,6.61,-4.16,0.45,1.5,1.14,0.03,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","CATCATCCTAAGCAAT",5,44.73,10.92,0.16,0.08,2.88,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCATGAATATTATC",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y L95D I142Y N151G",4
"lib1","SARS-CoV-2","CATCATTAAATAACTT",5,15.42,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","A33F Y50F F70K N118L",4
"lib1","SARS-CoV-2","CATCATTAAGCGAAGG",3,74.64,10.74,-0.02,0.1,2.78,1.01,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","CATCATTAGCCATCTT",9,23.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9S V103K G116D Q144T",4
"lib1","SARS-CoV-2","CATCATTATTAAATAG",8,139.61,10.53,-0.24,0.03,2.94,1.03,0,">1 nonsynonymous","S139C Q168R",2
"lib1","SARS-CoV-2","CATCATTCCTCAACCA",3,5.24,NA,NA,NA,NA,NA,NA,"stop","G9* R16K V71N",3
"lib1","SARS-CoV-2","CATCATTCCTGGAGGC",2,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M V115R F126K",3
"lib1","SARS-CoV-2","CATCATTTATCTAACT",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S S139V V153A",3
"lib1","SARS-CoV-2","CATCATTTGAGTCAAA",1,2.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CATCATTTTAGGCCCG",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T L95N D112M",3
"lib1","SARS-CoV-2","CATCCAAAAGACATGA",5,115.26,10.13,-0.63,0.07,2.63,1.01,0,">1 nonsynonymous","L5G D90G",2
"lib1","SARS-CoV-2","CATCCAACAGATTAGA",3,0.41,NA,NA,NA,NA,NA,NA,"stop","L5I G9Y P54* C61V K87N D112I",6
"lib1","SARS-CoV-2","CATCCAACGGCACAAC",3,36.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G101H N120C Y143A",3
"lib1","SARS-CoV-2","CATCCAATGAGAATGT",4,52.75,10.47,-0.29,0.07,2.88,1.08,0,">1 nonsynonymous","Y35V L60P",2
"lib1","SARS-CoV-2","CATCCACATAAATTAA",10,3.52,NA,NA,NA,NA,NA,NA,"stop","C6E V71N Y123*",3
"lib1","SARS-CoV-2","CATCCACATGTTATGT",6,112.41,10.71,-0.06,0.06,2.94,1.03,0,"1 nonsynonymous","V194A",1
"lib1","SARS-CoV-2","CATCCACGTTAAAAAG",2,60.15,9.43,-1.33,0.14,1.65,1.21,0.01,">1 nonsynonymous","Y39G A89I",2
"lib1","SARS-CoV-2","CATCCACTAATAAAAG",14,193.56,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23K F167S",2
"lib1","SARS-CoV-2","CATCCACTCCGATCAC",1,14.11,9.51,-1.26,0.17,2.71,1.04,0.01,">1 nonsynonymous","T3D Y121S",2
"lib1","SARS-CoV-2","CATCCAGAACTATTCG",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91P T100M K128S",3
"lib1","SARS-CoV-2","CATCCAGACGCATAAA",1,30.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12R K56F Y123Q",3
"lib1","SARS-CoV-2","CATCCAGAGGTTCTGT",4,40.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34S S41V Y143A",3
"lib1","SARS-CoV-2","CATCCAGCATAAACGC",1,46.08,6.57,-4.2,0.48,1.5,1.22,0.03,">1 nonsynonymous","G9S Y119T L125D",3
"lib1","SARS-CoV-2","CATCCAGCATCCGGTA",2,30.26,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R16P K94L G116Q N157D",4
"lib1","SARS-CoV-2","CATCCAGCCACGCTAT",6,151.08,10.76,0,0.04,2.87,1.1,0,">1 nonsynonymous","T55N N130R",2
"lib1","SARS-CoV-2","CATCCAGGAGTACGAT",2,59.95,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F44D F99R",2
"lib1","SARS-CoV-2","CATCCAGGGTACGCAA",3,40.95,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","S43H W106G N157G G166R Y175I",5
"lib1","SARS-CoV-2","CATCCATAGGGCCAAT",8,101.39,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37I N130C R179G A192S",4
"lib1","SARS-CoV-2","CATCCATATCCTTTTA",6,40.82,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A18M A67H I138K T201V",4
"lib1","SARS-CoV-2","CATCCATCAGATAACG",1,62.12,10.2,-0.57,0.06,2.76,1.02,0,">1 nonsynonymous","R78C K94Q Q168F",3
"lib1","SARS-CoV-2","CATCCATGTAACATTA",3,867.72,9.95,-0.82,0.05,2.85,1.01,0,">1 nonsynonymous","D90W T170S",2
"lib1","SARS-CoV-2","CATCCATTAAAAAAGG",1,25.81,10.79,0.03,0.1,2.83,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCCATTAAGCCTTT",1,6.98,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","C6G N58A S69K V77Y G83V G166L",6
"lib1","SARS-CoV-2","CATCCATTCGAAATTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S53F C61V A67H Q84* V103D L122P N151S F156L L188N C195A",10
"lib1","SARS-CoV-2","CATCCATTCTATAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y91D D97* R127W",3
"lib1","SARS-CoV-2","CATCCATTTTCCTACA",2,27.33,10.79,0.02,0.1,2.93,1.05,0.01,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","CATCCCAAATCTAAGC",2,15.68,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3A F47G S113V",3
"lib1","SARS-CoV-2","CATCCCAACATAAGCG",10,37.76,6,-4.76,1.96,3,1.17,0.01,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","CATCCCAACGCAGTTT",1,13.92,6.41,-4.36,0.77,1.5,1.02,0.05,">1 nonsynonymous","T46M G74Q G101D F160A",4
"lib1","SARS-CoV-2","CATCCCAACTCTAATT",3,24.23,9.83,-0.93,0.15,2.11,1.06,0.01,">1 nonsynonymous","R27A F47R",2
"lib1","SARS-CoV-2","CATCCCAAGGTATGGG",7,9.34,6.43,-4.33,1.72,3,1.18,0.02,">1 nonsynonymous","N13T D68K G86S F99L",4
"lib1","SARS-CoV-2","CATCCCAATCACACAG",3,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H A14H A81F G86E P133Y C158Q",6
"lib1","SARS-CoV-2","CATCCCACCTGAATTA",1,6.73,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","C6G G83V K94F L122W N130C F167W",6
"lib1","SARS-CoV-2","CATCCCACTATGGACT",3,0,NA,NA,NA,NA,NA,NA,"stop","F12C C49V P96A N107E I138*",5
"lib1","SARS-CoV-2","CATCCCATACTCATGT",2,10.52,6.13,-4.63,0.43,2.89,1.21,0,">1 nonsynonymous","K56L I104Q P149H",3
"lib1","SARS-CoV-2","CATCCCATCACATGGG",3,16.61,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22M S164I V181G",3
"lib1","SARS-CoV-2","CATCCCATCTCCATAG",3,62.4,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4E F44M D68V T170I",4
"lib1","SARS-CoV-2","CATCCCCAAATAGGAC",4,23.97,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14H N92H N157V L187M",4
"lib1","SARS-CoV-2","CATCCCCAATCTGCAG",3,8.72,7.31,-3.46,0.19,1.5,1.06,0.01,">1 nonsynonymous","K87Y F99C E141A",3
"lib1","SARS-CoV-2","CATCCCCCATCGCTTT",12,171.57,10.64,-0.13,0.04,2.91,1.04,0,">1 nonsynonymous","N1E D90L",2
"lib1","SARS-CoV-2","CATCCCCTAGTTTACG",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D K48N D90V T100S G117T",5
"lib1","SARS-CoV-2","CATCCCGAAGAGGCAT",4,175.79,10.56,-0.2,0.04,2.87,1.01,0,">1 nonsynonymous","G83V N171M",2
"lib1","SARS-CoV-2","CATCCCGACTGCTAAC",2,0.28,NA,NA,NA,NA,NA,NA,"stop","L5N Y143I Q168*",3
"lib1","SARS-CoV-2","CATCCCGAGGCCCCCA",11,115.7,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F44S A89P C150S",3
"lib1","SARS-CoV-2","CATCCCGGACTACTAG",1,14.28,10.48,-0.29,0.08,2.91,1,0,">1 nonsynonymous","N58P N64H S69Y Q163R",4
"lib1","SARS-CoV-2","CATCCCGTTCAACCTA",1,21.92,6.54,-4.23,0.48,1.5,1.08,0.03,">1 nonsynonymous","L5N K56M D112E E135R A192H",5
"lib1","SARS-CoV-2","CATCCCTACACGAACG",4,27.1,6,-4.76,1.33,1.5,1.17,0.02,">1 nonsynonymous","F17L K48F G86P",3
"lib1","SARS-CoV-2","CATCCCTCAACTCTAT",5,96.78,10.73,-0.03,0.06,2.91,1.04,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","CATCCCTCGGACCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* G86D V115A",3
"lib1","SARS-CoV-2","CATCCCTCTTCCCGCT",5,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A C150A L162W",3
"lib1","SARS-CoV-2","CATCCCTGAAAGGAGC",6,37.19,10.77,0,0.06,2.9,1.01,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","CATCCCTTAACAGATA",2,92.97,10.12,-0.64,0.06,2.86,1.01,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","CATCCGAACTTCTCTT",13,66.11,6.3,-4.46,0.71,1.5,1.24,0.03,"1 nonsynonymous","V71N",1
"lib1","SARS-CoV-2","CATCCGAAGAATTATA",2,34.46,9.21,-1.56,0.19,1.59,1.18,0.02,">1 nonsynonymous","G83R F99V",2
"lib1","SARS-CoV-2","CATCCGAATCCTCAGG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","R27L G86* Y119G",3
"lib1","SARS-CoV-2","CATCCGACACTATATA",4,60.26,10.81,0.05,0.05,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCCGACCACATTTG",3,19.05,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L60G V77D",2
"lib1","SARS-CoV-2","CATCCGAGAAAAGGCA",7,89.81,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44P Y175V R179V",3
"lib1","SARS-CoV-2","CATCCGAGCAAGTCAC",8,64.18,6.04,-4.72,0.27,3,1.12,0,">1 nonsynonymous","G9N T63G P96G F167C",4
"lib1","SARS-CoV-2","CATCCGCACCTACACA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D N107D G146W",3
"lib1","SARS-CoV-2","CATCCGGAACAAACAG",3,90.35,6.68,-4.08,0.34,1.5,1.14,0.02,">1 nonsynonymous","I28G G146M K199T",3
"lib1","SARS-CoV-2","CATCCGGGTCTAGAAC",1,40.16,10.39,-0.38,0.06,2.87,1.02,0,">1 nonsynonymous","A81K L122R G155A",3
"lib1","SARS-CoV-2","CATCCGTAGCGAAACA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","D137K Y175L S200*",3
"lib1","SARS-CoV-2","CATCCGTCTTTAAGGT",2,84.79,10.65,-0.11,0.06,2.86,1.07,0,">1 nonsynonymous","S45D D75E T201G",3
"lib1","SARS-CoV-2","CATCCTAAAAGATGTG",3,16.01,8.98,-1.78,0.21,1.65,1.19,0.02,">1 nonsynonymous","S43D C102A",2
"lib1","SARS-CoV-2","CATCCTAAAGCGGAAA",1,30.7,10.16,-0.61,0.07,2.79,1.03,0,">1 nonsynonymous","T3N F44S Q163T",3
"lib1","SARS-CoV-2","CATCCTAAATATGAAG",1,31.57,8.11,-2.65,0.27,1.5,1.1,0.03,">1 nonsynonymous","F8G T100K S164F",3
"lib1","SARS-CoV-2","CATCCTAACTTAACTC",2,29.48,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","I2A R27D V52D P82N D98N",5
"lib1","SARS-CoV-2","CATCCTAAGATTTGTG",3,7.18,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V37D S43L K128L L183Y",4
"lib1","SARS-CoV-2","CATCCTACAATAACCT",10,86.88,8.5,-2.27,0.21,1.5,1.1,0.02,">1 nonsynonymous","I142M Y165R",2
"lib1","SARS-CoV-2","CATCCTACCCCCGCAT",1,5.93,8.27,-2.5,0.3,1.77,1.36,0.03,">1 nonsynonymous","L60R Y91L I104H",3
"lib1","SARS-CoV-2","CATCCTAGCTTACACC",3,1.51,NA,NA,NA,NA,NA,NA,"stop","V37F Q84L Q168*",3
"lib1","SARS-CoV-2","CATCCTATACACATTG",1,100.04,10.18,-0.58,0.07,2.9,1.01,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","CATCCTCAATAAATCA",1,17.92,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","D90S V103H",2
"lib1","SARS-CoV-2","CATCCTCATACGCCGA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W V52E",2
"lib1","SARS-CoV-2","CATCCTCCAAAACCAG",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S E10V I28P L60V D68E Y121L G155D",7
"lib1","SARS-CoV-2","CATCCTCCACACACCA",2,80.55,7.92,-2.84,0.14,2.37,1.11,0.01,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","CATCCTCGAAGCACGC",1,7.88,6.34,-4.43,0.66,3,1,0,">1 nonsynonymous","N4E F167R",2
"lib1","SARS-CoV-2","CATCCTGACCGAGGAG",5,11.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S45D F99R I104W F167M Y178F",5
"lib1","SARS-CoV-2","CATCCTGCCCTAGTAA",4,102.7,10.68,-0.08,0.07,2.92,1,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","CATCCTGGATTTGAAA",2,55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V32L L38G I72T N109L",4
"lib1","SARS-CoV-2","CATCCTGGGACCTGGT",12,43.96,6.12,-4.64,0.5,1.5,1.11,0.01,">1 nonsynonymous","N120V G166M L183A",3
"lib1","SARS-CoV-2","CATCCTGGTGAAACTA",2,233.9,9.55,-1.21,0.06,1.93,1.05,0,">1 nonsynonymous","I72M D97P",2
"lib1","SARS-CoV-2","CATCCTGTCTGAGAAA",2,62.62,10.05,-0.71,0.06,2.9,1.07,0,">1 nonsynonymous","C61D G174L",2
"lib1","SARS-CoV-2","CATCCTTCAATTACTC",9,201.49,10.48,-0.28,0.04,2.88,1.03,0,"1 nonsynonymous","N151P",1
"lib1","SARS-CoV-2","CATCCTTCACAAACGG",1,10.38,9.33,-1.43,0.25,1.91,1.06,0.02,">1 nonsynonymous","T15C A89T",2
"lib1","SARS-CoV-2","CATCCTTGCGAAGTAA",3,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E A22S D90F N107A G155S",5
"lib1","SARS-CoV-2","CATCGAACCCAGGTAC",6,117.25,10.75,-0.01,0.07,2.93,1.04,0,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","CATCGAACGCCCATCT",3,87,9.92,-0.85,0.07,2.43,1.06,0,">1 nonsynonymous","V173T P197F",2
"lib1","SARS-CoV-2","CATCGAACTTAGCTAC",1,23.02,10.75,-0.01,0.08,2.83,1.15,0,"synonymous","",0
"lib1","SARS-CoV-2","CATCGAAGCAAAAGAA",8,88.22,10.43,-0.33,0.04,2.87,1.04,0,">1 nonsynonymous","K26L T100N E154R",3
"lib1","SARS-CoV-2","CATCGAAGCACTGAGG",5,187.98,10.19,-0.58,0.04,2.9,1.05,0,">1 nonsynonymous","D59H N110L G174P",3
"lib1","SARS-CoV-2","CATCGAATTGAAGTGA",7,43.46,8.77,-2,0.38,1.5,1,0.06,">1 nonsynonymous","I88Q P149A",2
"lib1","SARS-CoV-2","CATCGACAAAACCACA",3,26.41,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C61E K94E C158H",3
"lib1","SARS-CoV-2","CATCGACTAAGACTTT",4,23.15,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","S45Y G86A D90F",3
"lib1","SARS-CoV-2","CATCGACTTATTGACC",3,64.53,10.62,-0.14,0.16,2.65,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CATCGAGAAACCCCTA",1,36.58,9.88,-0.88,0.09,2.08,1,0,">1 nonsynonymous","R16S L38R",2
"lib1","SARS-CoV-2","CATCGAGAACTCATCA",2,34.29,10.61,-0.16,0.05,2.83,1.09,0,">1 nonsynonymous","L60F K87R",2
"lib1","SARS-CoV-2","CATCGAGACCATATTA",3,76.01,8.54,-2.23,0.13,2.94,1.05,0.01,">1 nonsynonymous","L5T N157K",2
"lib1","SARS-CoV-2","CATCGAGCATCACACG",3,35.46,10.4,-0.37,0.08,2.91,1,0,">1 nonsynonymous","G9L G146A",2
"lib1","SARS-CoV-2","CATCGAGCCAAAAAAA",8,59.43,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A105E F134L",2
"lib1","SARS-CoV-2","CATCGAGCCCAAGTGC",11,508.39,9.97,-0.79,0.06,2.76,1.02,0,">1 nonsynonymous","Y35K K87R",2
"lib1","SARS-CoV-2","CATCGAGTTCATACAC",2,10.64,6.83,-3.94,0.49,1.5,1.09,0.08,">1 nonsynonymous","T3I G86E R136Q T201I",4
"lib1","SARS-CoV-2","CATCGATAGGCTACAC",4,113.47,9.99,-0.78,0.05,2.91,1.01,0,">1 nonsynonymous","T3E V37G K87E",3
"lib1","SARS-CoV-2","CATCGATAGTAGTACA",2,13.81,8.71,-2.05,0.12,2.74,1.17,0.01,">1 nonsynonymous","T100S G117K",2
"lib1","SARS-CoV-2","CATCGATGCTCCGAAC",6,107.78,10.44,-0.32,0.05,2.86,1.06,0,">1 nonsynonymous","K87Y N120I K128P",3
"lib1","SARS-CoV-2","CATCGATTAACTGTAA",2,36.66,10.86,0.1,0.05,2.91,1.06,0,">1 nonsynonymous","N64D T100F Q163L P197F",4
"lib1","SARS-CoV-2","CATCGCAAGGAATAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","K114* Y165H Q176H T201M",4
"lib1","SARS-CoV-2","CATCGCCAAGCTAAAA",1,11.68,8.33,-2.44,0.32,1.5,1.17,0.03,">1 nonsynonymous","I2H A89L",2
"lib1","SARS-CoV-2","CATCGCCAATGAAAAT",3,20.11,7.15,-3.61,0.5,1.5,1.06,0.06,">1 nonsynonymous","L5V W106C Y143Q",3
"lib1","SARS-CoV-2","CATCGCCAGATGTAAT",13,38.22,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","L5G Y35V G51I K94A S129I L162T",6
"lib1","SARS-CoV-2","CATCGCCCAAAACGGA",6,79.44,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N64V Y93E N107T K128E",4
"lib1","SARS-CoV-2","CATCGCCTCTCCTCAG",1,5.03,10.73,-0.03,0.06,3,1,0,"1 nonsynonymous","S36W",1
"lib1","SARS-CoV-2","CATCGCGAAATATCAA",3,47.13,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N1V G86A T100S",3
"lib1","SARS-CoV-2","CATCGCGAAGCACTTA",9,159.54,10.43,-0.34,0.05,2.9,1.04,0,">1 nonsynonymous","L5C G155R",2
"lib1","SARS-CoV-2","CATCGCGCCAATAGCG",5,49.9,9.95,-0.82,0.11,2.1,1.07,0,">1 nonsynonymous","R124K S129G",2
"lib1","SARS-CoV-2","CATCGCGTTAATGAAC",2,42.09,6.03,-4.74,0.79,1.5,1.16,0.01,">1 nonsynonymous","I2T C31A Q84R Y121S E141L",5
"lib1","SARS-CoV-2","CATCGCTAAATACAAA",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R I88R D98S",3
"lib1","SARS-CoV-2","CATCGCTAAGGCTGTC",6,2.58,NA,NA,NA,NA,NA,NA,"stop","D97* I104G G152V",3
"lib1","SARS-CoV-2","CATCGCTGCAGCTCAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F S41L",2
"lib1","SARS-CoV-2","CATCGCTGGCAATCTA",3,7.84,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","V103F N118A",2
"lib1","SARS-CoV-2","CATCGGAATTTACCAG",2,62.5,10.79,0.03,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCGGACATGCTACT",5,2.05,NA,NA,NA,NA,NA,NA,"stop","F12* N110T V173F",3
"lib1","SARS-CoV-2","CATCGGCAATCCTTAA",3,4.6,NA,NA,NA,NA,NA,NA,"stop","P7Y V37* Q144M Y165I",4
"lib1","SARS-CoV-2","CATCGGGAAATACTGC",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R K56L F99K V103R H189I",5
"lib1","SARS-CoV-2","CATCGGTAACAATAAT",3,12.16,6.35,-4.41,0.5,1.7,1.24,0.02,">1 nonsynonymous","F12T S139L P169S V182G",4
"lib1","SARS-CoV-2","CATCGGTCCAGTTTAA",4,51.07,7.83,-2.93,0.21,1.5,1.12,0.01,">1 nonsynonymous","W106C Q144D G166S",3
"lib1","SARS-CoV-2","CATCGTAAAAATATCT",4,60.83,10.73,-0.03,0.06,2.92,1.03,0,"1 nonsynonymous","V32A",1
"lib1","SARS-CoV-2","CATCGTAAAACTCAAA",2,45.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F F134T",2
"lib1","SARS-CoV-2","CATCGTAAGATGTATC",3,33.19,6,-4.76,1.66,1.5,1.22,0.03,">1 nonsynonymous","T3H K87Y N107A P149I G155R",5
"lib1","SARS-CoV-2","CATCGTACGTTCGCGT",3,29.24,8.48,-2.29,0.17,1.82,1.16,0.01,">1 nonsynonymous","T63W D90S N118S",3
"lib1","SARS-CoV-2","CATCGTCATTTTCATA",7,76.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A18R S36T N92R",3
"lib1","SARS-CoV-2","CATCGTCTGCAGATAA",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E F44S F99D V173Q",4
"lib1","SARS-CoV-2","CATCGTCTGGCTTAAC",1,42.18,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S69L A81E L95R T148F",4
"lib1","SARS-CoV-2","CATCGTGCTCTTAGAC",3,9.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F V52R P96S Y123S G146M P149L",6
"lib1","SARS-CoV-2","CATCGTGGGCCACATT",5,64.21,10.62,-0.15,0.05,2.9,1.04,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","CATCGTTAACTAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T46V D112E E135* I142S",4
"lib1","SARS-CoV-2","CATCGTTAATATGCAT",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T T85Y",2
"lib1","SARS-CoV-2","CATCGTTCTTAATATA",3,110.44,8.66,-2.11,0.11,2.35,1.14,0,">1 nonsynonymous","G9I N109H G116R T201R",4
"lib1","SARS-CoV-2","CATCGTTGAACACCTG",3,17.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12Y I104D E154S",3
"lib1","SARS-CoV-2","CATCGTTGTACTCATT",3,30.22,8.75,-2.01,0.17,1.54,1.14,0.01,">1 nonsynonymous","W106L G155R",2
"lib1","SARS-CoV-2","CATCTAAATATAGAAG",2,0.79,NA,NA,NA,NA,NA,NA,"stop","D97* Y121G",2
"lib1","SARS-CoV-2","CATCTAAATGGAAAAG",6,123.32,10.72,-0.04,0.03,2.94,1.01,0,">1 nonsynonymous","S43T N151E T201H",3
"lib1","SARS-CoV-2","CATCTAACCCTACAAG",2,49.95,10.24,-0.53,0.04,2.87,1.01,0,"1 nonsynonymous","S19G",1
"lib1","SARS-CoV-2","CATCTAACCTTCTTGC",2,32.26,7.83,-2.94,0.31,2.13,1.17,0.03,">1 nonsynonymous","I104V N171K",2
"lib1","SARS-CoV-2","CATCTAAGCTAAAGCT",4,15.41,7.2,-3.57,0.46,1.5,1.1,0.06,">1 nonsynonymous","I104N L162K",2
"lib1","SARS-CoV-2","CATCTAAGTAGATAGC",2,1.66,NA,NA,NA,NA,NA,NA,"stop","I72* D98E",2
"lib1","SARS-CoV-2","CATCTAAGTTTCAAAT",1,13.88,10.6,-0.17,0.15,2.87,1.06,0.01,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","CATCTAATAGAATAAC",2,11.8,10.23,-0.53,0.13,2,1.04,0.01,">1 nonsynonymous","N1L T15I T100V H189Y",4
"lib1","SARS-CoV-2","CATCTAATGTATAGAA",5,45.53,10.51,-0.26,0.06,2.97,1,0,">1 nonsynonymous","F12I T63E",2
"lib1","SARS-CoV-2","CATCTAATTGAGCACT",2,69.35,10.2,-0.57,0.08,2.64,1,0,">1 nonsynonymous","W106F I138M S139G",3
"lib1","SARS-CoV-2","CATCTAATTTGGAGAC",1,13.6,10.41,-0.35,0.19,2.39,1,0.01,">1 nonsynonymous","C31Y A42P P54A",3
"lib1","SARS-CoV-2","CATCTACAACGAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12K G101* L122T N130L",4
"lib1","SARS-CoV-2","CATCTACAAGAAGTAG",4,116.96,10.65,-0.12,0.03,2.93,1.02,0,">1 nonsynonymous","C61W T201C",2
"lib1","SARS-CoV-2","CATCTACAATTTACGA",8,55.36,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S108P N120S T201L",3
"lib1","SARS-CoV-2","CATCTACAGACACTTG",12,106.02,10.1,-0.66,0.03,2.9,1,0,">1 nonsynonymous","C6E T201Y",2
"lib1","SARS-CoV-2","CATCTACCAAAAATAC",2,63.01,9.88,-0.88,0.1,1.89,1.09,0,"1 nonsynonymous","C49M",1
"lib1","SARS-CoV-2","CATCTACTACGATGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N4S K56* T100L",3
"lib1","SARS-CoV-2","CATCTACTATTCCAAG",12,57.04,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C49L T63F D90Y Y121R",4
"lib1","SARS-CoV-2","CATCTACTCATGGGGA",17,286.79,10.81,0.04,0.06,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTAGATCCAAAAA",2,32.24,9.74,-1.02,0.15,2.24,1.03,0.01,">1 nonsynonymous","T55R F99L F160T",3
"lib1","SARS-CoV-2","CATCTAGCTCAGATTT",4,94.42,10.24,-0.53,0.04,2.93,1,0,">1 nonsynonymous","S43F G174L",2
"lib1","SARS-CoV-2","CATCTAGTATGTATAA",6,62.8,10.14,-0.63,0.09,2.84,1.01,0,">1 nonsynonymous","L60K G174L",2
"lib1","SARS-CoV-2","CATCTATACGTCCTCC",5,23.55,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F62D A89C A105L P133V C150Y",5
"lib1","SARS-CoV-2","CATCTATATGTAATTA",3,3.75,NA,NA,NA,NA,NA,NA,"stop","Y35* F99R G146S",3
"lib1","SARS-CoV-2","CATCTATGCTGAATAC",2,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86E D98C V103T I138T V153M Y159R",6
"lib1","SARS-CoV-2","CATCTATTGTGTGAAC",4,21.54,7.21,-3.55,0.44,1.5,1.01,0.06,">1 nonsynonymous","T3Y G9W F134T C150D",4
"lib1","SARS-CoV-2","CATCTATTGTTGTCTT",1,51.01,9.93,-0.83,0.14,1.92,1.03,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","CATCTCAAATTGCTAA",7,155.77,8.84,-1.92,0.07,2.78,1.07,0,">1 nonsynonymous","N110T N171P T201A",3
"lib1","SARS-CoV-2","CATCTCAAGTACTGCA",7,31.64,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16I S53F D59T D68E R127P",5
"lib1","SARS-CoV-2","CATCTCAATCAAGATT",1,13.23,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D34G N107Y",2
"lib1","SARS-CoV-2","CATCTCACCGTCTTAT",6,99.64,8.9,-1.86,0.21,1.63,1.19,0.02,">1 nonsynonymous","L38R T63L V65I T201Q",4
"lib1","SARS-CoV-2","CATCTCACGAACAGAG",10,57.6,8.78,-1.98,0.18,1.5,1.02,0.02,">1 nonsynonymous","T15S K56L N64S D90V D97S",5
"lib1","SARS-CoV-2","CATCTCACTAAATAGG",21,115.81,6,-4.76,1.88,1.5,1.27,0.04,">1 nonsynonymous","A14D A42P A81S Y91S",4
"lib1","SARS-CoV-2","CATCTCACTCGAAACG",2,16.29,9.44,-1.33,0.37,1.5,1.09,0.05,">1 nonsynonymous","Y21R S41D",2
"lib1","SARS-CoV-2","CATCTCAGAAATTCAA",4,33.4,9.32,-1.45,0.2,1.83,1.12,0.02,">1 nonsynonymous","L5C E10L D90G",3
"lib1","SARS-CoV-2","CATCTCAGAATCCATG",1,34.87,7.54,-3.23,0.2,1.62,1.12,0.01,"1 nonsynonymous","R73W",1
"lib1","SARS-CoV-2","CATCTCAGGAAAATGT",1,12.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P161Y H189Y",2
"lib1","SARS-CoV-2","CATCTCAGGTACCTGA",15,348.07,10.15,-0.61,0.04,2.74,1.02,0,">1 nonsynonymous","F47C K56V",2
"lib1","SARS-CoV-2","CATCTCCCAGACCAAG",7,313.03,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","P54L A145R Y175L",3
"lib1","SARS-CoV-2","CATCTCGAATTAAAGG",14,69.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I A67P V153R V173D",4
"lib1","SARS-CoV-2","CATCTCTAATAATTCG",2,46.41,10.28,-0.48,0.07,2.85,1.05,0,">1 nonsynonymous","L5Y Y35C",2
"lib1","SARS-CoV-2","CATCTCTGCGACACCA",2,15.66,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","C6D S36M F44A L122M R127V K198M",6
"lib1","SARS-CoV-2","CATCTCTTAAGCGCAA",1,12.17,9.55,-1.22,0.27,1.94,1.05,0.04,">1 nonsynonymous","F8R F44T",2
"lib1","SARS-CoV-2","CATCTGAAAACATAGA",1,10.89,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N92K P149H",2
"lib1","SARS-CoV-2","CATCTGAAATTGGCAA",9,151,10.79,0.03,0.06,2.83,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTGAACAGAAAAT",1,48.73,8.87,-1.9,0.14,1.63,1.2,0.01,">1 nonsynonymous","A14D L38F T55A S139V",4
"lib1","SARS-CoV-2","CATCTGAACGATCATG",6,3.98,NA,NA,NA,NA,NA,NA,"stop","Y91* F167L",2
"lib1","SARS-CoV-2","CATCTGAAGATTAGGC",7,23.93,7.26,-3.51,0.15,1.59,1.14,0,"1 nonsynonymous","S108L",1
"lib1","SARS-CoV-2","CATCTGAAGTTTGGTA",1,29.75,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G51D S164Y T170V A190V",4
"lib1","SARS-CoV-2","CATCTGACAAATGCAT",6,40.88,7.03,-3.73,0.38,1.5,1.12,0.04,">1 nonsynonymous","F12S K56V K94V L131H",4
"lib1","SARS-CoV-2","CATCTGACGATGCTTT",4,12.02,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G74A P96T W106Y Q176R L183T",5
"lib1","SARS-CoV-2","CATCTGACGTAGTAGG",6,29.66,6.51,-4.25,0.49,1.5,1.17,0.02,">1 nonsynonymous","S45M D97P D112N G166I",4
"lib1","SARS-CoV-2","CATCTGACTAAATGAC",1,7.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162F",1
"lib1","SARS-CoV-2","CATCTGACTACAAAAA",1,8.06,9.5,-1.26,0.25,1.96,1.01,0.02,">1 nonsynonymous","S19G S43E E135A",3
"lib1","SARS-CoV-2","CATCTGCCAGATTGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* Q168P",2
"lib1","SARS-CoV-2","CATCTGCTACACACTA",6,1.22,NA,NA,NA,NA,NA,NA,"stop","C150D Y165*",2
"lib1","SARS-CoV-2","CATCTGCTTCATCTAG",7,108.31,10.8,0.04,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTGGTATTGATCA",4,20,9.78,-0.99,0.1,2.73,1.04,0,">1 nonsynonymous","T46K K87M D98G L188V",4
"lib1","SARS-CoV-2","CATCTGGTCCACTATC",2,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53T L95Y V103E Q176L",4
"lib1","SARS-CoV-2","CATCTGGTGTTCGAAC",3,26.9,10.37,-0.39,0.08,2.87,1.06,0,">1 nonsynonymous","A42K Q84V E135S",3
"lib1","SARS-CoV-2","CATCTGTACATAGTTA",3,24.94,7.78,-2.99,0.39,1.5,1.17,0.07,">1 nonsynonymous","L95K A105H T201P",3
"lib1","SARS-CoV-2","CATCTGTACTACAACA",3,34.54,8.35,-2.41,0.18,2.82,1.11,0.01,">1 nonsynonymous","K26A F126E",2
"lib1","SARS-CoV-2","CATCTGTTAATTAATT",5,104.78,10.78,0.01,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTTAACAAATCAA",4,22.62,7.72,-3.04,0.44,1.5,1.14,0.05,">1 nonsynonymous","F99V T170R",2
"lib1","SARS-CoV-2","CATCTTAACGCCCAGA",2,43.81,10.76,-0.01,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTTAAGGCGTTTT",3,23.53,6.76,-4.01,0.47,1.5,1.1,0.06,">1 nonsynonymous","V71E D97Y N107I F160L",4
"lib1","SARS-CoV-2","CATCTTACACTCATTC",7,34.96,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","F47S T63R L95E S108P P161A",5
"lib1","SARS-CoV-2","CATCTTAGATTAAACC",10,10.51,NA,NA,NA,NA,NA,NA,"stop","L38* R124N F134L",3
"lib1","SARS-CoV-2","CATCTTATCTCAATGA",2,62.18,9.19,-1.57,0.15,1.96,1.15,0.01,">1 nonsynonymous","L38V F44L Y123W F156K T201Y",5
"lib1","SARS-CoV-2","CATCTTCAAATATATA",4,43.26,7.47,-3.3,0.29,1.5,1.08,0.02,">1 nonsynonymous","A89M L183V",2
"lib1","SARS-CoV-2","CATCTTCCACGTCTCA",14,136.99,10.26,-0.5,0.05,2.87,1.01,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","CATCTTCCCTCATAAT",3,81,10.63,-0.13,0.05,2.92,1.03,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","CATCTTCCGTGGAGTA",1,29.37,10.59,-0.17,0.11,2.92,1,0.01,"1 nonsynonymous","G155T",1
"lib1","SARS-CoV-2","CATCTTCCTCGATTGG",3,87.79,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S139G Y159S G166R",3
"lib1","SARS-CoV-2","CATCTTCGCAAGTTAA",3,36.03,10.9,0.14,0.12,2.81,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTTCGGTCCTACT",2,6.28,7.33,-3.43,0.46,1.5,1,0.06,">1 nonsynonymous","D34L D90Q N120L G152Y",4
"lib1","SARS-CoV-2","CATCTTGAAGCCCAAG",3,188.34,10.78,0.01,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CATCTTGAGGCTCATT",6,70.81,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","G86D K94L V173C",3
"lib1","SARS-CoV-2","CATCTTGATTATACAA",5,34.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9R N64L N92E P133N Q163S G172M L183I",7
"lib1","SARS-CoV-2","CATCTTGCATAGTACG",2,2.04,NA,NA,NA,NA,NA,NA,"stop","C6K A42S N130*",3
"lib1","SARS-CoV-2","CATCTTGCGGATATAT",4,60.82,10.43,-0.33,0.08,2.64,1.03,0,">1 nonsynonymous","T46I K87L",2
"lib1","SARS-CoV-2","CATCTTGGACGTGGGT",3,0.25,NA,NA,NA,NA,NA,NA,"stop","C31K F62M T201*",3
"lib1","SARS-CoV-2","CATCTTGGCTGTCTCT",3,85.83,10.82,0.05,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATCTTGTGAACGCAG",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R D97F V103N K128M G146L P149R",6
"lib1","SARS-CoV-2","CATCTTTCGAGCCCTT",3,33.1,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6Q A18N N64Y Y93R R179V",5
"lib1","SARS-CoV-2","CATCTTTTGCCCAGCT",8,79.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C49L V65G R124T",3
"lib1","SARS-CoV-2","CATGAAAACAGATATG",2,27.99,9.67,-1.1,0.09,2.61,1.12,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","CATGAAAACATAGGCA",4,36.81,6.78,-3.98,0.3,1.5,1.2,0.01,">1 nonsynonymous","L5Q D137K",2
"lib1","SARS-CoV-2","CATGAAAACATGTTAA",4,45.43,10.72,-0.04,0.09,2.91,1.06,0,"1 nonsynonymous","V37F",1
"lib1","SARS-CoV-2","CATGAAAACCGCAGGC",3,42.92,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F47T N130I Y143V Q176Y",4
"lib1","SARS-CoV-2","CATGAAAACTAAATTG",1,15.81,10.87,0.1,0.17,2.96,1,0.01,">1 nonsynonymous","Y35W P149E Y178F",3
"lib1","SARS-CoV-2","CATGAAAAGCCATATC",3,34.78,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","L5F A14G A89Y G117Q F160Y",5
"lib1","SARS-CoV-2","CATGAAAATTAACCAC",4,116.84,10.43,-0.34,0.03,2.94,1.02,0,">1 nonsynonymous","T46D F134W",2
"lib1","SARS-CoV-2","CATGAAACACCAACCT",1,2.14,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CATGAAACCCCTCTTC",10,101.07,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","K87T N120W S164T V180E",4
"lib1","SARS-CoV-2","CATGAAACTAACTGCC",10,151.98,7.94,-2.83,0.17,1.5,1.14,0.01,">1 nonsynonymous","G51F K87N T170F",3
"lib1","SARS-CoV-2","CATGAAACTTAAATAT",6,48.03,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G86F F99L",2
"lib1","SARS-CoV-2","CATGAAACTTTAAAAA",3,42.87,10.82,0.06,0.09,2.95,1.04,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","CATGAAAGCCTAAATT",1,77.27,10.54,-0.22,0.04,2.9,1.03,0,">1 nonsynonymous","Y35L V180T",2
"lib1","SARS-CoV-2","CATGAAATAAAAGCGA",4,28.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12R K94E I104G",3
"lib1","SARS-CoV-2","CATGAAATATAATAAA",4,20.68,6.58,-4.18,0.66,1.5,1.18,0.06,">1 nonsynonymous","V37Y V71E",2
"lib1","SARS-CoV-2","CATGAAATATACGTAA",1,20.39,7.39,-3.37,0.2,1.57,1.08,0.01,">1 nonsynonymous","F62K T170I",2
"lib1","SARS-CoV-2","CATGAACAAAGAGTGC",1,5.73,9.21,-1.55,0.41,1.5,1,0.07,"1 nonsynonymous","I104K",1
"lib1","SARS-CoV-2","CATGAACAAGCAAATT",8,7.3,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","L38P Q163E V173T",3
"lib1","SARS-CoV-2","CATGAACCGAACAATG",6,121.27,10.34,-0.42,0.06,2.89,1,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","CATGAACGCCTCATTA",11,175.34,10.38,-0.39,0.02,2.92,1.02,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","CATGAACTAAGGCGCC",2,8.07,6.71,-4.06,0.47,2.21,1.14,0.01,">1 nonsynonymous","F12A R27G T148Y",3
"lib1","SARS-CoV-2","CATGAACTAATATACT",6,25.64,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T46R S139L F167L R179L",4
"lib1","SARS-CoV-2","CATGAAGAGCCGCTGT",3,59.57,10.57,-0.19,0.04,2.92,1,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","CATGAAGTGCAATAGA",1,38.68,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L60P S69N G155A F167S",4
"lib1","SARS-CoV-2","CATGAAGTTTAGACAA",17,225.31,8.74,-2.03,0.1,2.88,1.11,0,">1 nonsynonymous","C61T N157H",2
"lib1","SARS-CoV-2","CATGAATATATGTCTA",1,7.37,10.73,-0.03,0.09,2.97,1.03,0,">1 nonsynonymous","V37Q C61R T201H",3
"lib1","SARS-CoV-2","CATGAATCAAAAATAG",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M R16K L188R",3
"lib1","SARS-CoV-2","CATGAATCATACCAAT",9,35.35,10.68,-0.08,0.06,2.89,1.07,0,"1 nonsynonymous","G116D",1
"lib1","SARS-CoV-2","CATGAATGCAGTCAAT",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q T100P R127L S139L",4
"lib1","SARS-CoV-2","CATGAATGTCAGGCGT",2,10.83,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S43P K48S L131S G166R",4
"lib1","SARS-CoV-2","CATGAATTAACTTGTT",4,35.71,8.68,-2.08,0.09,2.89,1.05,0,">1 nonsynonymous","K128L F134Y N157H",3
"lib1","SARS-CoV-2","CATGAATTATATGTAA",1,54.17,10.8,0.04,0.05,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGAATTTAACGAAC",3,57.15,10.64,-0.13,0.09,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGACACAATTAAGT",7,10.17,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","R27M N92H",2
"lib1","SARS-CoV-2","CATGACACACAAGACA",9,120.23,10.48,-0.28,0.05,2.85,1.06,0,">1 nonsynonymous","S41V F47L",2
"lib1","SARS-CoV-2","CATGACACCAATTAGG",6,135.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T55E D97G E141G C158D",4
"lib1","SARS-CoV-2","CATGACAGAGCATACT",4,0,NA,NA,NA,NA,NA,NA,"stop","I2E N24F F44I Y121F T140W Y178*",6
"lib1","SARS-CoV-2","CATGACAGTTAATCAA",2,9.24,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","G174F",1
"lib1","SARS-CoV-2","CATGACATACCACCGT",4,31.32,6,-4.76,1.14,3,1.09,0,">1 nonsynonymous","G83M G101M R124M V181I",4
"lib1","SARS-CoV-2","CATGACATCTGTGTTA",1,6.38,6.59,-4.17,0.82,1.5,1.21,0.05,">1 nonsynonymous","N92G V103T",2
"lib1","SARS-CoV-2","CATGACCCAAATGCCA",2,40.06,10.8,0.04,0.1,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGACCCCTCTGACG",2,37.39,10.04,-0.72,0.1,2.29,1.03,0,">1 nonsynonymous","F62Y R136F",2
"lib1","SARS-CoV-2","CATGACCGTCTCCGCC",9,56.18,9.83,-0.93,0.19,1.5,1.1,0.02,">1 nonsynonymous","D68M T85F",2
"lib1","SARS-CoV-2","CATGACCTGTTTATAA",2,40.72,6.45,-4.31,0.74,1.5,1.14,0.05,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","CATGACGAATACGACC",3,115.46,10.78,0.01,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGACGAGAAATCAA",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N F8Q V65A F99P C102T Y121N",6
"lib1","SARS-CoV-2","CATGACGCAAACACGC",7,99.05,9.77,-0.99,0.12,2.37,1.03,0.01,">1 nonsynonymous","N58Y T85K E141C S200L",4
"lib1","SARS-CoV-2","CATGACGCCCGTCGAG",11,120.11,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I72P A105Q",2
"lib1","SARS-CoV-2","CATGACGCGCTCGGAG",4,112.65,10.73,-0.03,0.07,2.88,1.08,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","CATGACGGCGGATTAT",4,2.62,NA,NA,NA,NA,NA,NA,"stop","W23* A42F",2
"lib1","SARS-CoV-2","CATGACGGGGTGACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","W23G P96L K132*",3
"lib1","SARS-CoV-2","CATGACGTCACTAAGC",3,30.97,9.81,-0.96,0.14,2.38,1,0.01,">1 nonsynonymous","C6K F62L",2
"lib1","SARS-CoV-2","CATGACTACCGCCCCC",5,53.6,10.7,-0.07,0.03,2.97,1,0,">1 nonsynonymous","K48Q Q84S",2
"lib1","SARS-CoV-2","CATGACTAGTCATCGT",1,60.89,10.71,-0.05,0.07,2.87,1.07,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","CATGACTATAATAATA",4,0,NA,NA,NA,NA,NA,NA,"stop","S19* L60P D97F E141D",4
"lib1","SARS-CoV-2","CATGACTCCTCTACAG",1,14.24,6.05,-4.72,0.6,3,1.09,0,">1 nonsynonymous","F44I T55M D112T R124L",4
"lib1","SARS-CoV-2","CATGACTCTAGATTTC",2,14.17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L125D G172N",2
"lib1","SARS-CoV-2","CATGACTTCCTATCAC",1,8.28,9.42,-1.34,0.14,2.76,1.15,0.01,">1 nonsynonymous","Y119M K198L",2
"lib1","SARS-CoV-2","CATGACTTTCCCCCAA",6,123.53,10.78,0.02,0.07,2.92,1.04,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","CATGACTTTGATGATT",4,23.01,10.13,-0.64,0.09,1.92,1.03,0,">1 nonsynonymous","F12I I104T",2
"lib1","SARS-CoV-2","CATGAGAAAAGTGAGG",5,72.14,10.39,-0.37,0.06,2.89,1.05,0,">1 nonsynonymous","S129H E141S F160L",3
"lib1","SARS-CoV-2","CATGAGAACACATAAC",9,204.16,10.71,-0.05,0.08,2.88,1.08,0,"1 nonsynonymous","V173Q",1
"lib1","SARS-CoV-2","CATGAGAACCACCAAA",4,13.57,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","L5K Q84S V103E Y123F T148C",5
"lib1","SARS-CoV-2","CATGAGAATAACCAAT",3,24.68,7.27,-3.5,0.28,1.5,1.11,0.03,">1 nonsynonymous","N13F Y35P R136L",3
"lib1","SARS-CoV-2","CATGAGAATGCGTTGA",4,57.34,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V32G G83R V103M N120V F134Y T148H S164L",7
"lib1","SARS-CoV-2","CATGAGAGGAAATTTT",4,8.23,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C31R K48D D98S Y119V E141T",5
"lib1","SARS-CoV-2","CATGAGAGTCCACCAA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","S36R N58Y Y66P F99T I142* G146* F156T",7
"lib1","SARS-CoV-2","CATGAGCAAGACAATT",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88A N107R V115D",3
"lib1","SARS-CoV-2","CATGAGCCCTACCGCA",1,49.32,10.76,0,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGAGCGTCTCCTGC",2,10.55,10.26,-0.5,0.13,2.9,1.12,0.01,">1 nonsynonymous","I2S K26E",2
"lib1","SARS-CoV-2","CATGAGCTCATGCACG",6,72.41,6,-4.76,1.05,1.5,1.17,0.01,">1 nonsynonymous","S36P I88F",2
"lib1","SARS-CoV-2","CATGAGCTCTCTAACT",3,41.25,6,-4.76,1.03,1.5,1.11,0.01,">1 nonsynonymous","V11L K26S D90E Y119L F134E P149T P161W",7
"lib1","SARS-CoV-2","CATGAGCTTTATCTCG",6,47.2,7.59,-3.17,0.27,1.5,1.03,0.02,"1 nonsynonymous","V65D",1
"lib1","SARS-CoV-2","CATGAGGAGTCATCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","K56* F99S P149H",3
"lib1","SARS-CoV-2","CATGAGGCGTGCCTAA",5,161.44,6.86,-3.9,0.39,1.5,1.2,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","CATGAGGGACTGTTAT",1,39.86,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A105L G116F E135V",3
"lib1","SARS-CoV-2","CATGAGGGAGTCCACC",1,28.9,8.97,-1.8,0.14,2.68,1.11,0.01,">1 nonsynonymous","T100Y Y119M R136H A190T",4
"lib1","SARS-CoV-2","CATGAGGGTACTAAGG",8,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y E141C F156S",3
"lib1","SARS-CoV-2","CATGAGTAATGCACAG",7,75.13,10.73,-0.03,0.06,2.86,1.09,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","CATGAGTAGTTTTGGC",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S P177W E186V",3
"lib1","SARS-CoV-2","CATGAGTCTAAGCATT",3,115.88,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P7V G9S Y93T C150V P177T",5
"lib1","SARS-CoV-2","CATGAGTTCTAAACAG",2,9.44,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","R27I N120F F134T F167A",4
"lib1","SARS-CoV-2","CATGATAAACACTCAC",3,92.74,10.51,-0.26,0.05,2.9,1.01,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","CATGATACCAAGAAAT",7,0.16,NA,NA,NA,NA,NA,NA,"stop","L60* R179F",2
"lib1","SARS-CoV-2","CATGATACGGCTGCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","K48L P54E D90L N110V Y119N Q144*",6
"lib1","SARS-CoV-2","CATGATACTACAGAAG",7,54.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45W Y93N",2
"lib1","SARS-CoV-2","CATGATAGCACCCTCC",2,70.65,10.53,-0.24,0.06,2.96,1.03,0,">1 nonsynonymous","A81K T100L L122R F156H",4
"lib1","SARS-CoV-2","CATGATAGCCCGACGG",5,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L P96M L122Y S139T Y165C",5
"lib1","SARS-CoV-2","CATGATAGCTTTTGTA",2,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T C61V A105Q G172M",4
"lib1","SARS-CoV-2","CATGATATAATCTGGC",2,2.12,NA,NA,NA,NA,NA,NA,"stop","A33K E76* S113I R136A Q176T",5
"lib1","SARS-CoV-2","CATGATCATACACGTT",4,57.89,10.82,0.05,0.13,2.78,1.08,0.01,"1 nonsynonymous","S200N",1
"lib1","SARS-CoV-2","CATGATCGCCACGGTG",4,9.93,10.9,0.14,0.1,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGATCGTATCATAA",8,128.64,9.55,-1.21,0.06,2.86,1.09,0,">1 nonsynonymous","T55S K87W L125V",3
"lib1","SARS-CoV-2","CATGATGCGGACTGGC",3,12.22,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F99T G155T",2
"lib1","SARS-CoV-2","CATGATGGCAACATCC",5,148.49,10.46,-0.31,0.05,2.85,1.06,0,">1 nonsynonymous","V32C N120V",2
"lib1","SARS-CoV-2","CATGATTAAGTAGACA",1,10.42,10.77,0.01,0.09,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGATTCAGGTACCT",3,56.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L60I G152N P161L",3
"lib1","SARS-CoV-2","CATGATTGCTATTAAG",9,122.55,10.14,-0.62,0.06,2.68,1.06,0,">1 nonsynonymous","L5C A14D",2
"lib1","SARS-CoV-2","CATGATTGTCTCATTA",1,25.39,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","S19E G86K G172E",3
"lib1","SARS-CoV-2","CATGATTTAGTAAACG",11,255.29,8.53,-2.24,0.08,2.73,1.07,0,">1 nonsynonymous","K114G I138T G155L",3
"lib1","SARS-CoV-2","CATGATTTGTATAAAA",1,44.33,8.76,-2.01,0.16,1.96,1.11,0.01,">1 nonsynonymous","V65T G117C",2
"lib1","SARS-CoV-2","CATGCAAAAACCGTTA",4,134.95,10.21,-0.56,0.09,2.48,1,0,">1 nonsynonymous","R27T P54W I72T",3
"lib1","SARS-CoV-2","CATGCAAACAGTCTGG",2,101.05,10.21,-0.55,0.07,2.35,1.01,0,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","CATGCAAACCTATGGT",5,48.97,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y39V K48A G86L G146Q P161L",5
"lib1","SARS-CoV-2","CATGCAACTCTACATC",17,113.05,7.32,-3.44,0.28,1.5,1.12,0.02,">1 nonsynonymous","L5F T15Q T85G G146V",4
"lib1","SARS-CoV-2","CATGCAAGCCACCCAT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","T55N S139P F160L Y178*",4
"lib1","SARS-CoV-2","CATGCAAGTTCTAATG",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36W A81D Y121D R127N D137H Y175A",6
"lib1","SARS-CoV-2","CATGCAATCTCAACAA",5,56.28,6,-4.76,2,3,1.2,0,">1 nonsynonymous","F8E A14T N64S P96T N107L E154C",6
"lib1","SARS-CoV-2","CATGCACACGCTCGGT",4,18.74,10.8,0.03,0.13,2.82,1.11,0,"1 nonsynonymous","K114M",1
"lib1","SARS-CoV-2","CATGCACACTCGTATT",8,178.63,9.93,-0.83,0.04,2.73,1.04,0,">1 nonsynonymous","N64S Q84V A105S F160V C195T",5
"lib1","SARS-CoV-2","CATGCACACTGGGCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34R P96V Q168*",3
"lib1","SARS-CoV-2","CATGCACAGCCCACTA",6,2697.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10G G51Y A89S",3
"lib1","SARS-CoV-2","CATGCACAGGTATATG",3,49.47,10.24,-0.53,0.08,2.47,1,0,">1 nonsynonymous","R27F K128I Q144N",3
"lib1","SARS-CoV-2","CATGCACGAACCAGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G V37Y S43L L60P D68I D75P",6
"lib1","SARS-CoV-2","CATGCACGATGATAAG",1,45.74,6.08,-4.68,0.99,1.5,1.19,0.03,">1 nonsynonymous","F17N A81S",2
"lib1","SARS-CoV-2","CATGCAGCGTACCAGA",1,19.16,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","D137A A145M N151F C158Q",4
"lib1","SARS-CoV-2","CATGCAGCTAAAAAGA",5,18.19,7.31,-3.46,0.35,1.63,1.19,0.04,">1 nonsynonymous","N4I Y50V",2
"lib1","SARS-CoV-2","CATGCATAACATATCA",6,43.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7E C61L P82M Y93V V103K",5
"lib1","SARS-CoV-2","CATGCATATCACTATT",3,2.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CATGCATTAAACCATC",9,30.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23F D68R A192E",3
"lib1","SARS-CoV-2","CATGCATTATACGTAG",5,37.01,10.16,-0.6,0.07,2.75,1,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","CATGCATTGTTACACA",1,6.28,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y35M Y93R N107H",3
"lib1","SARS-CoV-2","CATGCCAAAAGTAATA",3,36.06,10.8,0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGCCAAGCTTACTA",4,10.84,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N4T G101S E141C K199S",4
"lib1","SARS-CoV-2","CATGCCACTCAAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* Y50V K94E N130D Q144L P161L T201*",7
"lib1","SARS-CoV-2","CATGCCAGAGCGATAC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35* T46D K56R I142L N157S P197Q",6
"lib1","SARS-CoV-2","CATGCCAGGGATTACA",1,5.87,6.08,-4.68,0.67,3,1.01,0,">1 nonsynonymous","T3L Y21C C49L V173H",4
"lib1","SARS-CoV-2","CATGCCATGGCTCAGG",8,130.73,10.8,0.03,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGCCATGTCAAGAT",9,20.46,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","C6M S45N P82Y Y93N N110L N171H",6
"lib1","SARS-CoV-2","CATGCCATGTCGTTTG",3,104.3,10.81,0.05,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGCCATTTATAGCT",7,130.65,8.67,-2.09,0.08,2.72,1.06,0,">1 nonsynonymous","N4S A33I N58A T85F T100L Y119N T148F",7
"lib1","SARS-CoV-2","CATGCCCACGAGATTT",7,80.67,10.43,-0.34,0.04,2.9,1.02,0,">1 nonsynonymous","T15V N24D N110T I142V",4
"lib1","SARS-CoV-2","CATGCCCAGGATCACG",1,0.95,NA,NA,NA,NA,NA,NA,"stop","T55L K87I Y143* P149S",4
"lib1","SARS-CoV-2","CATGCCCAGTCAACAT",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F S45P W106G L122R E135R G166V",6
"lib1","SARS-CoV-2","CATGCCCATATACATG",1,13.22,9.45,-1.31,0.25,1.5,1.08,0.03,">1 nonsynonymous","Y35I D137V Q144A",3
"lib1","SARS-CoV-2","CATGCCCGGTGGCTCA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I I104N P133R C150A V153L",5
"lib1","SARS-CoV-2","CATGCCCTACCGGACC",4,17.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51V C150S",2
"lib1","SARS-CoV-2","CATGCCCTAGGCACTC",3,17.09,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","I2S I104N K128W C150N",4
"lib1","SARS-CoV-2","CATGCCGAACAATCCG",1,51.85,10.85,0.09,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGCCGAATCATACT",12,148.6,10.12,-0.64,0.08,2.23,1,0,"1 nonsynonymous","Y178R",1
"lib1","SARS-CoV-2","CATGCCGATCAGAGGT",4,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29A T55D",2
"lib1","SARS-CoV-2","CATGCCGATTCCACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101S G117S P197S",3
"lib1","SARS-CoV-2","CATGCCGATTGACAGG",5,78.96,10.75,-0.02,0.03,2.96,1,0,">1 nonsynonymous","T55A N64F N151R",3
"lib1","SARS-CoV-2","CATGCCGGGTCTTAAA",6,28.78,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A89E V115W S129M",3
"lib1","SARS-CoV-2","CATGCCGTATGAAAAA",2,42.33,6.84,-3.93,0.35,1.5,1.18,0.03,">1 nonsynonymous","L5R R27E P96Q G174F",4
"lib1","SARS-CoV-2","CATGCCTAAGCCACGA",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G V77M K94G P96T L122K",5
"lib1","SARS-CoV-2","CATGCCTCTCCTGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","W106S Q144* T170L",3
"lib1","SARS-CoV-2","CATGCCTTACCAACCA",7,32.49,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C6D S29T L60R P96E N151F",5
"lib1","SARS-CoV-2","CATGCGAAAACATCAG",3,1.18,NA,NA,NA,NA,NA,NA,"stop","T63P I88Q T201*",3
"lib1","SARS-CoV-2","CATGCGAAACAAGTAA",8,110.12,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94M P96S G101L E141R Y175K",5
"lib1","SARS-CoV-2","CATGCGAACCTATCGG",5,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N G83Q C102R",3
"lib1","SARS-CoV-2","CATGCGACAATAGAAA",2,34.78,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","T55N P82S D112T",3
"lib1","SARS-CoV-2","CATGCGACCTGTTCTG",3,1.04,NA,NA,NA,NA,NA,NA,"stop","N24S Y35M D112Y L131* I138A",5
"lib1","SARS-CoV-2","CATGCGCAATAATTAG",5,123.9,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44N Y143S N157R",3
"lib1","SARS-CoV-2","CATGCGCAGGGGTGAC",6,99.93,7.73,-3.03,0.21,1.5,1.17,0.01,">1 nonsynonymous","I2S N40K S139Y G152C",4
"lib1","SARS-CoV-2","CATGCGCATACCCACC",1,19.53,6.46,-4.31,0.4,1.5,1.13,0.02,">1 nonsynonymous","L5T R16F C150T",3
"lib1","SARS-CoV-2","CATGCGGACGACCTCA",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K I88F F99N T201S",4
"lib1","SARS-CoV-2","CATGCGGATAAACGAT",8,124.92,6,-4.76,1.22,2.5,1.13,0,">1 nonsynonymous","C6T Y50H T55C K87S",4
"lib1","SARS-CoV-2","CATGCGGCTACAAGCT",3,84.04,10.74,-0.02,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGCGGGGACCACTA",5,71.02,10.76,-0.01,0.09,2.85,1.09,0,">1 nonsynonymous","L5K F160S L187T",3
"lib1","SARS-CoV-2","CATGCGGTCTACTACA",5,113.06,10.31,-0.45,0.05,2.72,1.04,0,">1 nonsynonymous","N13E C61M T140Q S164R",4
"lib1","SARS-CoV-2","CATGCGTGGTAAAGTA",2,28.98,10.14,-0.62,0.07,2.88,1.02,0,">1 nonsynonymous","F8L V32S Q168T",3
"lib1","SARS-CoV-2","CATGCTAAAAGGCTCT",1,37.23,8.25,-2.52,0.14,2.19,1.09,0.01,">1 nonsynonymous","T3R T85W Y119I T201N",4
"lib1","SARS-CoV-2","CATGCTAACATGCATA",2,47.81,9.22,-1.55,0.14,1.87,1.12,0.01,">1 nonsynonymous","A18F G116V F160G",3
"lib1","SARS-CoV-2","CATGCTAACGATACCC",4,95.2,9.66,-1.11,0.11,1.87,1.13,0,">1 nonsynonymous","F47I T55I V180M",3
"lib1","SARS-CoV-2","CATGCTAGCGATACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T63H K87A P96*",3
"lib1","SARS-CoV-2","CATGCTATACGAGAGA",3,53.4,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A14T A22E L95N T170F T201M",5
"lib1","SARS-CoV-2","CATGCTCATATACTCA",1,31.11,9.54,-1.23,0.16,1.86,1.18,0.01,">1 nonsynonymous","I28A C61F D90A",3
"lib1","SARS-CoV-2","CATGCTCTAGGCCGAG",4,57.38,6.33,-4.44,0.51,1.5,1.21,0.02,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","CATGCTCTATGACATT",3,67.41,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S19V S36I N120L C158S",4
"lib1","SARS-CoV-2","CATGCTCTCACAATTA",8,63.35,8.42,-2.34,0.12,2.28,1.1,0.01,">1 nonsynonymous","C61I T85S N107C L125P",4
"lib1","SARS-CoV-2","CATGCTCTTGAAAAAT",2,7.72,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","R25F D75L S200K",3
"lib1","SARS-CoV-2","CATGCTTCGGTACAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* P161L",2
"lib1","SARS-CoV-2","CATGCTTGCGGTTGAC",8,4.44,NA,NA,NA,NA,NA,NA,"stop","G86Q L122R E154* S200V",4
"lib1","SARS-CoV-2","CATGCTTTCGTTTGGC",1,32.04,10.74,-0.02,0.05,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CATGGAAAGAATCTGA",2,79.64,9.34,-1.42,0.06,2.82,1.08,0,">1 nonsynonymous","E154N Y159H",2
"lib1","SARS-CoV-2","CATGGAAGCAACTAAC",5,26.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12D A18T N151F R179I",4
"lib1","SARS-CoV-2","CATGGAAGTAAATAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* S29A S113H P169T Y175V",5
"lib1","SARS-CoV-2","CATGGAATGGAGTTAA",4,67.15,10.04,-0.73,0.08,2.77,1.02,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","CATGGAATTCCTGCTA",2,25.17,10.11,-0.65,0.09,2.82,1,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","CATGGACAGTATCACG",3,32.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9V S19I C31E",3
"lib1","SARS-CoV-2","CATGGACCTGGCTATC",2,31.71,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6N Y66S F70Y Q84S P133S P149E",6
"lib1","SARS-CoV-2","CATGGACTTCACAAAT",4,62.75,10.81,0.04,0.08,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CATGGAGAAAGTCTCG",4,2.25,NA,NA,NA,NA,NA,NA,"stop","F44* F62I F134D",3
"lib1","SARS-CoV-2","CATGGAGACTTGTTGA",4,53.62,10.62,-0.14,0.09,2.91,1.02,0,">1 nonsynonymous","V37Q T46I L60M P149C",4
"lib1","SARS-CoV-2","CATGGAGAGCTATGTA",1,14.12,10.6,-0.17,0.11,2.83,1.1,0.01,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","CATGGAGAGGTCCCAA",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G116A",2
"lib1","SARS-CoV-2","CATGGAGATGCCCTTC",4,52.57,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3G R25H L122P G166S T201S",5
"lib1","SARS-CoV-2","CATGGAGGATGAAATT",2,28.24,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K128E P177L",2
"lib1","SARS-CoV-2","CATGGAGTTAGTAGGC",1,37.91,9.65,-1.12,0.22,1.88,1.14,0.02,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","CATGGATAAATACCCT",3,19.35,6.02,-4.75,1.05,1.5,1.17,0.02,">1 nonsynonymous","F17L A105M G174R",3
"lib1","SARS-CoV-2","CATGGATAGTTAACAA",8,10.62,NA,NA,NA,NA,NA,NA,"stop","T3* K56V V153W F156*",4
"lib1","SARS-CoV-2","CATGGATCCTCCAACA",4,188.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62H P177M",2
"lib1","SARS-CoV-2","CATGGATTCCACTCAC",6,86.42,10.79,0.03,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGGATTCCTTATAG",3,129.72,10.36,-0.41,0.04,2.92,1.04,0,">1 nonsynonymous","G51K T170S",2
"lib1","SARS-CoV-2","CATGGCAAAAATAGAC",1,0.39,NA,NA,NA,NA,NA,NA,"stop","D59A R73C K132*",3
"lib1","SARS-CoV-2","CATGGCACGGCACTAT",1,0.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","CATGGCACTGACGTAT",1,18.78,10,-0.77,0.19,2.02,1,0.01,">1 nonsynonymous","S53R Y121R",2
"lib1","SARS-CoV-2","CATGGCATATCACTAT",1,50.04,9.66,-1.1,0.15,2.25,1.13,0.01,">1 nonsynonymous","R16K Y35W V103M F126V",4
"lib1","SARS-CoV-2","CATGGCATGTTGAGAA",4,22.31,10.53,-0.23,0.08,2.78,1.2,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","CATGGCATTAAGCCTA",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G N58K",2
"lib1","SARS-CoV-2","CATGGCCATGCAATCG",1,81.3,10.66,-0.11,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGGCGCATCGCCCC",3,134.59,10.73,-0.04,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGGCTAAGTTTTAC",3,49.88,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9V K56G V77H",3
"lib1","SARS-CoV-2","CATGGCTATATCCCTT",7,64.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77G D97Y Y123N N151K L188C",5
"lib1","SARS-CoV-2","CATGGCTTCTAAACTT",1,5.37,9.58,-1.19,0.22,2.64,1.22,0.01,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","CATGGGAAACCGGGCT",3,26.38,6,-4.76,2,3,1.17,0.05,">1 nonsynonymous","Q84D N107M D112F T170G",4
"lib1","SARS-CoV-2","CATGGGAATGCAGATA",8,131.93,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F44L I72P G83N L162E",4
"lib1","SARS-CoV-2","CATGGGAGTGAGCGCG",1,9.1,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49M R78L K87I C150W T201V",5
"lib1","SARS-CoV-2","CATGGGATACACCGCT",3,45.69,10.25,-0.51,0.06,2.76,1.07,0,">1 nonsynonymous","E10S I142H",2
"lib1","SARS-CoV-2","CATGGGATCACGGGGT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","D68* N107G",2
"lib1","SARS-CoV-2","CATGGGCCAAAACAAT",2,20.15,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","K94Q T100S I104P Y143R",4
"lib1","SARS-CoV-2","CATGGGGCGCTCCTCA",2,12.3,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","S36A C61L Y91W C150V V173T",5
"lib1","SARS-CoV-2","CATGGTAAATTGTGGT",8,1.82,NA,NA,NA,NA,NA,NA,"stop","L60* G116L P169A",3
"lib1","SARS-CoV-2","CATGGTAAGAGCATGT",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H Y91G N151R Y159E G166I",5
"lib1","SARS-CoV-2","CATGGTAGTGCACGCG",4,24.32,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","I2M I104M C158I G166K",4
"lib1","SARS-CoV-2","CATGGTATCAACATTG",3,29.89,7.33,-3.44,0.37,1.5,1.17,0.03,">1 nonsynonymous","W106I N120Y F134M",3
"lib1","SARS-CoV-2","CATGGTCATCTTTTAG",3,15.45,9.95,-0.82,0.21,1.5,1,0.04,">1 nonsynonymous","D97M W106V E135A",3
"lib1","SARS-CoV-2","CATGGTCCATCCTTGC",1,20.52,10.3,-0.46,0.09,2.85,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","CATGGTCCCTATCCAG",1,12.21,6.68,-4.08,0.53,1.5,1.15,0.05,">1 nonsynonymous","V103S Y119K",2
"lib1","SARS-CoV-2","CATGGTGATCACTCAC",7,83.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E C31G G83S T100V G166V",5
"lib1","SARS-CoV-2","CATGGTGCAAGTAGGA",9,74.98,6,-4.76,2,3,1.15,0,">1 nonsynonymous","R27C L95Q",2
"lib1","SARS-CoV-2","CATGGTGCAGTAGTCC",2,18.61,9.79,-0.97,0.16,2.39,1.08,0.01,">1 nonsynonymous","G9E A89Y",2
"lib1","SARS-CoV-2","CATGGTGTCTGCTGTA",6,83.09,9.95,-0.82,0.08,2.04,1.03,0,">1 nonsynonymous","T3H R127G Q163S",3
"lib1","SARS-CoV-2","CATGGTTAAAGCATCT",2,16.19,6.76,-4,0.4,2.42,1.22,0.02,">1 nonsynonymous","G83E D90T R136F",3
"lib1","SARS-CoV-2","CATGGTTGAGACCCTG",7,49.38,6,-4.76,0.77,1.5,1.14,0.01,"1 nonsynonymous","R179G",1
"lib1","SARS-CoV-2","CATGGTTTGTAAACTG",8,0,NA,NA,NA,NA,NA,NA,"stop","N1G G9S Y35* F126L",4
"lib1","SARS-CoV-2","CATGTAACGTAGTCTA",14,14.93,6.33,-4.43,0.91,1.5,1.2,0.05,">1 nonsynonymous","T3A T15Y S36G R179F",4
"lib1","SARS-CoV-2","CATGTAACTTGGGACA",7,111.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6S K48L G83W F99K N109S S129L",6
"lib1","SARS-CoV-2","CATGTACAGAGTACCT",5,117.77,9.93,-0.84,0.06,2.67,1.05,0,">1 nonsynonymous","S43W Y178L",2
"lib1","SARS-CoV-2","CATGTACGTACCGTAC",2,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A T15M S41G K94Q G101M Y121R",6
"lib1","SARS-CoV-2","CATGTATATAAGAACC",8,41.38,9.79,-0.98,0.08,2.81,1,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","CATGTCAAGGTACTCT",6,1.28,NA,NA,NA,NA,NA,NA,"stop","L122* F160V",2
"lib1","SARS-CoV-2","CATGTCACACCTACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q R124S E154L",3
"lib1","SARS-CoV-2","CATGTCGAAACCAACT",4,41.5,6.03,-4.73,0.97,1.5,1.18,0.01,">1 nonsynonymous","R27M V37S G86S F99Q W106Q G152L K199Q",7
"lib1","SARS-CoV-2","CATGTCTCACTCTGGA",5,59.62,8.66,-2.1,0.19,1.5,1.04,0.02,">1 nonsynonymous","Y35H I88L",2
"lib1","SARS-CoV-2","CATGTGACGGCCTACA",5,117.72,10.17,-0.6,0.06,2.79,1.01,0,">1 nonsynonymous","G116M P149Y",2
"lib1","SARS-CoV-2","CATGTGGAAAGATTGA",4,62.98,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V32S V65T V77Q K87Y L162K",5
"lib1","SARS-CoV-2","CATGTGGAAGCTAAAT",1,40.89,9.33,-1.44,0.08,2.82,1.1,0,">1 nonsynonymous","Y66F Q168L",2
"lib1","SARS-CoV-2","CATGTGTATCTCAACT",1,56.84,8.79,-1.97,0.12,2.73,1.16,0.01,">1 nonsynonymous","G117T F134Q",2
"lib1","SARS-CoV-2","CATGTGTTAGATTAAT",3,42.12,10,-0.77,0.14,2.26,1.12,0.01,">1 nonsynonymous","A105W N110P",2
"lib1","SARS-CoV-2","CATGTGTTCGCGGATT",4,40.67,9.85,-0.91,0.1,2.51,1.05,0,">1 nonsynonymous","K56I N107S N130K S139N",4
"lib1","SARS-CoV-2","CATGTTAAGAACAAAA",8,3.11,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","CATGTTAATGAGATAG",2,7.32,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15S T63R D112E Y178L",4
"lib1","SARS-CoV-2","CATGTTAATGCGCCCT",2,29.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L W106M L122S Y175C",4
"lib1","SARS-CoV-2","CATGTTATCAAACCTG",3,30.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R73L D97M N130D A145S N151F",5
"lib1","SARS-CoV-2","CATGTTCAACCACTTA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","C31T L57*",2
"lib1","SARS-CoV-2","CATGTTCAGGTTATCA",1,32.97,8.43,-2.33,0.23,2.02,1.2,0.03,">1 nonsynonymous","K48Y K114V Y119C",3
"lib1","SARS-CoV-2","CATGTTCGGATTCATG",5,64.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14L N118K P161N",3
"lib1","SARS-CoV-2","CATGTTCTTAATATTC",8,188.16,10.77,0.01,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATGTTGACGGATATT",8,183.23,9.95,-0.81,0.1,2.48,1.03,0,">1 nonsynonymous","A14S I28L S45R C61N T140V",5
"lib1","SARS-CoV-2","CATGTTGGTCATATGA",1,20.61,6,-4.76,2,3,1.08,0,">1 nonsynonymous","S53A P96S T100L Y165P",4
"lib1","SARS-CoV-2","CATGTTTAGGAAGTTT",4,24.2,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","V71H I104K K199V",3
"lib1","SARS-CoV-2","CATGTTTCAATCACGG",13,248.24,10.67,-0.09,0.03,2.92,1.03,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","CATGTTTTACAACACG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N S36K",2
"lib1","SARS-CoV-2","CATTAAAATATGCATC",4,30.68,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","A42I Q84M D90A N157S Y178G",5
"lib1","SARS-CoV-2","CATTAAAATCTACTGG",1,55.81,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28L A105H N110V S147L Y175K",5
"lib1","SARS-CoV-2","CATTAAACAACATGGA",2,40.09,10.43,-0.34,0.09,2.88,1.04,0.01,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","CATTAAACAAGAATAA",8,89.12,10.04,-0.72,0.08,2.78,1,0,">1 nonsynonymous","Y35V Q84S P96N",3
"lib1","SARS-CoV-2","CATTAAACAATGCGTA",1,19.4,10.49,-0.28,0.15,2.9,1.09,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CATTAAACAGCAAATT",2,29.58,8.97,-1.8,0.12,1.99,1.07,0.01,">1 nonsynonymous","D90C E135G Q163N",3
"lib1","SARS-CoV-2","CATTAAACCTAAAAAC",9,57.94,6.14,-4.62,0.91,1.5,1.21,0.02,">1 nonsynonymous","N4M S53K G101I T201A",4
"lib1","SARS-CoV-2","CATTAAACTCGAATGA",5,26.67,10.08,-0.69,0.1,2.39,1,0.01,">1 nonsynonymous","I28W F99V",2
"lib1","SARS-CoV-2","CATTAAAGAACAGACT",2,26.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49D C102F",2
"lib1","SARS-CoV-2","CATTAAAGCTATGGTA",2,33.81,10.74,-0.03,0.07,2.95,1.03,0,"1 nonsynonymous","S29K",1
"lib1","SARS-CoV-2","CATTAAAGCTTGGACC",9,84.79,8.89,-1.87,0.2,1.5,1.14,0.02,">1 nonsynonymous","G9F N40H A81Y",3
"lib1","SARS-CoV-2","CATTAAATACAAGACC",4,218.04,7.06,-3.71,0.34,1.5,1.16,0.03,">1 nonsynonymous","A89T Y178K",2
"lib1","SARS-CoV-2","CATTAAATCCTTATGT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6P R25* D90G D137Q",4
"lib1","SARS-CoV-2","CATTAAATGAAACTAT",1,74.25,10.04,-0.72,0.05,2.88,1,0,">1 nonsynonymous","V32G G116Q C195Y",3
"lib1","SARS-CoV-2","CATTAAATGAGCGTGT",5,8.4,10.85,0.08,0.16,2.93,1,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","CATTAAATTAATAAAG",1,27.73,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N58Y G86R Y93L",3
"lib1","SARS-CoV-2","CATTAAATTCCATCTA",5,38.28,10.71,-0.05,0.06,2.92,1.03,0,"1 nonsynonymous","N151A",1
"lib1","SARS-CoV-2","CATTAACAGTTAAAGT",5,30.34,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","K56W G152K C158A",3
"lib1","SARS-CoV-2","CATTAACCCATCCGCT",1,5.98,10.51,-0.26,0.05,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTAACGAACTCACA",3,12.32,9.71,-1.05,0.08,3,1.02,0,">1 nonsynonymous","I142V N157D",2
"lib1","SARS-CoV-2","CATTAACGACGGCATT",3,39.52,10.79,0.03,0.07,2.83,1.13,0,"1 nonsynonymous","K56D",1
"lib1","SARS-CoV-2","CATTAACGGATGAGTG",3,2.55,NA,NA,NA,NA,NA,NA,"stop","Q79* G146A Y178G",3
"lib1","SARS-CoV-2","CATTAACGGGTATGCT",1,50.51,9.57,-1.2,0.12,1.7,1.13,0.01,">1 nonsynonymous","L57M K128G V173S",3
"lib1","SARS-CoV-2","CATTAACTAAATACAG",5,6.98,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","E10G T15Y W106L S129I",4
"lib1","SARS-CoV-2","CATTAACTATGCAGGG",6,65.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L A14L G51S K132P I138V",5
"lib1","SARS-CoV-2","CATTAACTGGGTAACT",6,46.36,10.75,-0.02,0.09,2.89,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTAACTGTCACATA",3,12.82,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23T D97S L122A L131F K132R V181G",6
"lib1","SARS-CoV-2","CATTAAGAAATTGTTA",1,27.56,6.26,-4.51,0.75,1.5,1.24,0.03,">1 nonsynonymous","T15C Y39D Y123N",3
"lib1","SARS-CoV-2","CATTAAGACCGACGAT",3,30.78,10.77,0,0.07,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTAAGAGTTGATCC",1,44.5,10.21,-0.56,0.07,2.81,1.02,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","CATTAAGCAATCCGAA",3,6.73,6,-4.76,2,1.5,1.38,0.08,">1 nonsynonymous","Y50W D90N R124L",3
"lib1","SARS-CoV-2","CATTAAGCACCGCACT",5,0.24,NA,NA,NA,NA,NA,NA,"stop","Q84L L95* L188S",3
"lib1","SARS-CoV-2","CATTAAGCTTAGACAT",2,18.89,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R124T E141W F156T",3
"lib1","SARS-CoV-2","CATTAAGTAAAGATTG",1,5.95,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T63P Y91E N107F F167L",4
"lib1","SARS-CoV-2","CATTAAGTATCATACG",7,90.3,10.2,-0.56,0.04,2.71,1.01,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","CATTAAGTCGTTAAAG",4,23.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S S41L R127T",3
"lib1","SARS-CoV-2","CATTAATACCCAACAA",1,11.9,NA,NA,NA,NA,NA,0.47,">1 nonsynonymous","S41V V71I V77M D97V R136N Y178S A192S",7
"lib1","SARS-CoV-2","CATTAATACTATGGTA",3,31.04,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F62H I88L Y119S R179L",4
"lib1","SARS-CoV-2","CATTAATACTCGCACA",3,24.97,9.01,-1.75,0.29,1.5,1.19,0.06,"1 nonsynonymous","P96F",1
"lib1","SARS-CoV-2","CATTAATATAACATGA",4,43.49,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11S F17Y Y21S W106V G155I",5
"lib1","SARS-CoV-2","CATTAATATAGATTAA",3,25.24,6.01,-4.75,1.43,1.5,1.23,0.04,">1 nonsynonymous","R16V P96R V103T S139R P149C F167Q",6
"lib1","SARS-CoV-2","CATTAATATGCCGAGC",2,2.5,NA,NA,NA,NA,NA,NA,"stop","A18N G83F Y123* P149S",4
"lib1","SARS-CoV-2","CATTAATCAAAAAAGC",3,16.9,9.81,-0.96,0.15,2.37,1.04,0.01,">1 nonsynonymous","T15G F44E T201L",3
"lib1","SARS-CoV-2","CATTAATCTGATATCC",3,67.36,9.84,-0.92,0.1,1.93,1.08,0,">1 nonsynonymous","V11S Y39V A190R",3
"lib1","SARS-CoV-2","CATTAATGCGTCTCCG",5,102.95,10.72,-0.05,0.08,2.89,1.08,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","CATTAATGGATTACCC",10,204.1,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K26R G83N L131R I142H V180E A190S P197Q",7
"lib1","SARS-CoV-2","CATTAATTCGAGTTCA",3,68.43,10.76,0,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTAATTCTATTAAC",2,50.2,8.02,-2.74,0.17,2.31,1.1,0.01,">1 nonsynonymous","Y35L Q144V C150S",3
"lib1","SARS-CoV-2","CATTAATTTACGAGCT",8,42.52,6.92,-3.84,0.4,1.5,1.16,0.03,">1 nonsynonymous","V103S G117M",2
"lib1","SARS-CoV-2","CATTACAAAAAATGAC",2,65.29,8.29,-2.47,0.27,1.5,1.14,0.03,">1 nonsynonymous","Y91V Q176N",2
"lib1","SARS-CoV-2","CATTACAAAAGACCTG",4,44.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31W I80A V103N R136G F167E",5
"lib1","SARS-CoV-2","CATTACAAATACTACT",1,17.47,7.56,-3.2,0.34,1.75,1.26,0.04,">1 nonsynonymous","N107P A145Y N151L",3
"lib1","SARS-CoV-2","CATTACAACATAATTC",5,28.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91V C102A S113P T170D",4
"lib1","SARS-CoV-2","CATTACAATAGAAGAG",2,30.19,10.6,-0.17,0.07,2.89,1.03,0,">1 nonsynonymous","F47I S129R",2
"lib1","SARS-CoV-2","CATTACACAGATAGCA",2,23.43,9.77,-0.99,0.15,2.14,1.01,0.02,">1 nonsynonymous","K56P D98K",2
"lib1","SARS-CoV-2","CATTACAGATAAATAA",8,141.18,10.83,0.06,0.06,2.92,1.03,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","CATTACAGGGAGCCCG",9,0.63,NA,NA,NA,NA,NA,NA,"stop","A22Q T46* T100P P149M",4
"lib1","SARS-CoV-2","CATTACATAACGACTG",1,1.31,NA,NA,NA,NA,NA,NA,"stop","L38* L57H Y66F K94D",4
"lib1","SARS-CoV-2","CATTACATATTCAAAC",7,12.92,10.14,-0.62,0.13,2.76,1,0.01,">1 nonsynonymous","F44M D98G",2
"lib1","SARS-CoV-2","CATTACATGGCACAGA",2,68.75,10.67,-0.1,0.06,2.93,1,0,">1 nonsynonymous","C61L K198N",2
"lib1","SARS-CoV-2","CATTACATGTCTACCT",4,65.25,10.71,-0.06,0.09,2.92,1.05,0,">1 nonsynonymous","S43I P54H",2
"lib1","SARS-CoV-2","CATTACCAGCCGCTTT",6,20.41,9.74,-1.02,0.09,2.24,1,0,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","CATTACCATAGGACAT",1,24.21,10.66,-0.1,0.05,2.89,1.08,0,"1 nonsynonymous","E141Q",1
"lib1","SARS-CoV-2","CATTACCATATAGCAT",2,47.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T100A A105R",2
"lib1","SARS-CoV-2","CATTACCATCCTCATA",2,33.21,10.71,-0.06,0.09,2.94,1.06,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","CATTACCCCTCAATCG",2,1.35,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","CATTACCGACTGCGCC",2,38.21,10.6,-0.16,0.09,2.79,1.14,0,">1 nonsynonymous","E141F T148S T201L",3
"lib1","SARS-CoV-2","CATTACCGATTGTTAT",3,32.61,8.11,-2.65,0.18,2.11,1.19,0.01,"1 nonsynonymous","G172S",1
"lib1","SARS-CoV-2","CATTACCGTATACACA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y119F K128* Y165E A190N K199*",5
"lib1","SARS-CoV-2","CATTACGAAGAAGCAC",1,19.67,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","I88A P96G D112G",3
"lib1","SARS-CoV-2","CATTACGATTGCCAAT",9,149.23,9.92,-0.84,0.06,2.14,1.04,0,">1 nonsynonymous","E10T D34W",2
"lib1","SARS-CoV-2","CATTACGCAATTGGCC",2,12.27,6,-4.76,1.23,3,1.07,0,">1 nonsynonymous","N4E E10K S41Q Y91K G117S",5
"lib1","SARS-CoV-2","CATTACGCATGAAAAC",2,44.07,6,-4.76,2,3,1.11,0,">1 nonsynonymous","A42G D68I N109W G116P Y159D",5
"lib1","SARS-CoV-2","CATTACGCTCTGGCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","CATTACGTACGTATCA",1,10.2,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","D90I G152M G172M",3
"lib1","SARS-CoV-2","CATTACTAACAAAAAA",1,36.76,10.63,-0.13,0.08,2.87,1.09,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","CATTACTCCGCACATT",8,123.01,10,-0.76,0.09,2.45,1.04,0,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","CATTACTGAATAAATA",4,60.8,6,-4.76,0.97,1.5,1.17,0.01,">1 nonsynonymous","A81L N92S R179S",3
"lib1","SARS-CoV-2","CATTACTTCATCAAAA",3,67.53,9.96,-0.8,0.08,2.34,1.05,0,">1 nonsynonymous","K56F D98F",2
"lib1","SARS-CoV-2","CATTACTTTTACAAAA",3,24.72,8.38,-2.38,0.13,2.64,1.05,0.01,">1 nonsynonymous","A33V C61K R78C N118S I142A",5
"lib1","SARS-CoV-2","CATTAGAACTATATCA",6,26.66,9.81,-0.96,0.15,2.02,1.11,0.01,">1 nonsynonymous","F8G N130T",2
"lib1","SARS-CoV-2","CATTAGACAGCACGGG",2,35.91,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","C61Y F70S",2
"lib1","SARS-CoV-2","CATTAGACTATTAGCC",3,72.08,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N4E N92V D137F",3
"lib1","SARS-CoV-2","CATTAGACTGAATACG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","P7Q C102* R127V Q144T",4
"lib1","SARS-CoV-2","CATTAGCACCGCGAGT",4,110.68,8.87,-1.89,0.07,2.86,1.12,0,">1 nonsynonymous","F62L A145Y",2
"lib1","SARS-CoV-2","CATTAGCATTGCCCTT",3,32.14,8.58,-2.18,0.18,1.96,1.11,0.01,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","CATTAGCCCGACTTTG",9,106.09,10.7,-0.06,0.05,2.91,1.05,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","CATTAGCGGGCGTTGA",9,75.85,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P82L Y93V",2
"lib1","SARS-CoV-2","CATTAGGAAACTCATG",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7F I28K Y119S K128S",4
"lib1","SARS-CoV-2","CATTAGGGAAGAATAA",5,67.61,9.98,-0.79,0.13,2.52,1.01,0,">1 nonsynonymous","E135L K198T",2
"lib1","SARS-CoV-2","CATTAGGGGTCGAACA",6,2.54,NA,NA,NA,NA,NA,NA,"stop","K56* Y91I",2
"lib1","SARS-CoV-2","CATTAGGGTACCTGTC",3,34.63,10.23,-0.54,0.05,2.96,1,0,">1 nonsynonymous","L60F K87C",2
"lib1","SARS-CoV-2","CATTAGGTTCAATCAG",1,28.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N I72K R78S I88P",4
"lib1","SARS-CoV-2","CATTAGTAACGAATGT",5,82,10.72,-0.05,0.08,2.97,1.02,0,">1 nonsynonymous","K87R P96H L122K K198G",4
"lib1","SARS-CoV-2","CATTAGTAATTATGTA",13,62.5,6,-4.76,1.2,1.5,1.23,0.02,">1 nonsynonymous","I2W G86A F99L",3
"lib1","SARS-CoV-2","CATTAGTATCCAAAAC",3,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R Y143M",2
"lib1","SARS-CoV-2","CATTAGTATCGGGTGG",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G S36Q R78L Y121T K128S F134M",6
"lib1","SARS-CoV-2","CATTAGTCAGCGCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G101R R136E E141L E154*",4
"lib1","SARS-CoV-2","CATTAGTGCGATAGAC",7,48.7,6.28,-4.48,1.01,1.5,1.21,0.05,">1 nonsynonymous","P82R L162S",2
"lib1","SARS-CoV-2","CATTAGTTACGCTCGC",3,40.48,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C6R A81K E141A N151C",4
"lib1","SARS-CoV-2","CATTAGTTTGAATCTA",8,115.98,10.54,-0.23,0.05,2.91,1.03,0,"1 nonsynonymous","L60D",1
"lib1","SARS-CoV-2","CATTATAAACATGCGC",1,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S R124A G146T",3
"lib1","SARS-CoV-2","CATTATAACCGGTTTG",2,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","CATTATAATGTGTCCA",8,58.68,10.62,-0.14,0.05,2.95,1.01,0,"1 nonsynonymous","S45A",1
"lib1","SARS-CoV-2","CATTATAATTGTCAAT",1,30.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14H S113T Y121R",3
"lib1","SARS-CoV-2","CATTATACATATTACC",7,76.88,10.74,-0.03,0.08,2.9,1.06,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","CATTATACGTACCGAC",2,24.84,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","CATTATACTATAAGCA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","CATTATAGCTATGGTA",3,36.73,6,-4.76,1.2,3,1.18,0.01,">1 nonsynonymous","E135K P161I",2
"lib1","SARS-CoV-2","CATTATATAACATTAA",4,32.55,8.45,-2.32,0.26,1.5,1.01,0.03,">1 nonsynonymous","T3R F17S S164F A190E",4
"lib1","SARS-CoV-2","CATTATATACCTTTCA",3,13.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41I D68W N118L",3
"lib1","SARS-CoV-2","CATTATATGTATTACA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","CATTATATTACTCCAT",2,49.01,10.34,-0.43,0.06,2.87,1,0,">1 nonsynonymous","G9I D34N",2
"lib1","SARS-CoV-2","CATTATATTCGTACAT",2,9.07,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A81Q G101S W106R",3
"lib1","SARS-CoV-2","CATTATATTTTTAATT",3,19.03,9.83,-0.93,0.12,2.5,1.17,0.01,">1 nonsynonymous","N1A Y66A V115T",3
"lib1","SARS-CoV-2","CATTATCAAAATTTTC",3,9.85,10.02,-0.74,0.08,2.71,1.07,0,">1 nonsynonymous","R27E V37F T46I A105S K128C",5
"lib1","SARS-CoV-2","CATTATCATCTGCTCA",6,129.73,10.15,-0.62,0.04,2.79,1.02,0,">1 nonsynonymous","T15R Y35C",2
"lib1","SARS-CoV-2","CATTATCCAGCTAATT",3,30.82,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Q84H T170Y G174L R179V",4
"lib1","SARS-CoV-2","CATTATCTCCTCGTTC",2,24.32,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L5T S36P V37L C61Q G86C G155W",6
"lib1","SARS-CoV-2","CATTATGAACACGCCG",2,0.29,NA,NA,NA,NA,NA,NA,"stop","S41Q K87* C102L",3
"lib1","SARS-CoV-2","CATTATGAAGACGACT",3,12.5,9.67,-1.1,0.3,1.55,1.1,0.04,">1 nonsynonymous","I2D R127L",2
"lib1","SARS-CoV-2","CATTATGATTAGCATA",2,36.05,10.1,-0.66,0.05,2.87,1.05,0,">1 nonsynonymous","C31Y T201P",2
"lib1","SARS-CoV-2","CATTATTAACAGTTCG",17,6.69,NA,NA,NA,NA,NA,NA,"stop","F17T P54F P82* V115G Y123S L131N P149M",7
"lib1","SARS-CoV-2","CATTATTCATAGATCT",5,78.72,6.96,-3.8,0.13,1.84,1.12,0,">1 nonsynonymous","N24H S113W G174Q",3
"lib1","SARS-CoV-2","CATTATTCTAAAACCT",1,0.39,NA,NA,NA,NA,NA,NA,"stop","N1* T15N G51W T63L Y93N I142E C150E C158I",8
"lib1","SARS-CoV-2","CATTATTTAATCATTT",7,19.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I80Y A105S L131M",3
"lib1","SARS-CoV-2","CATTATTTATCTGATA",1,15.66,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F8L D90R Y119L K132N P161L",5
"lib1","SARS-CoV-2","CATTATTTTGAAATTG",4,26.72,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40L N92E N120F G172S P197N",5
"lib1","SARS-CoV-2","CATTCAAACACACGAT",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N D59I D98F C102F",4
"lib1","SARS-CoV-2","CATTCAAAGAACCGTT",4,26.41,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A33R D68P G146W",3
"lib1","SARS-CoV-2","CATTCAACAAATAATA",3,57.65,10.11,-0.65,0.09,2.38,1.06,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","CATTCAACTAATCTGA",3,90.28,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","CATTCAACTTAAGGAC",1,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W S45K G83H P161S",4
"lib1","SARS-CoV-2","CATTCAAGAATAAGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R S36K P54R L95R W106A",5
"lib1","SARS-CoV-2","CATTCAAGTAAAATAA",1,1.85,NA,NA,NA,NA,NA,NA,"stop","S45I T55P P161*",3
"lib1","SARS-CoV-2","CATTCAAGTAGAGAAG",2,23.12,10.67,-0.1,0.1,2.81,1.11,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","CATTCAATAATCCGAT",2,185.81,8.38,-2.38,0.15,1.82,1.1,0.01,">1 nonsynonymous","P149Q Q176V",2
"lib1","SARS-CoV-2","CATTCAATCCGACAAA",2,32.9,10.86,0.1,0.16,2.91,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CATTCAATGCTCCCAT",3,5.6,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F12V V103S T201R",3
"lib1","SARS-CoV-2","CATTCACCGCACATAG",7,58.29,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","K48Y S113V Y121W G174K",4
"lib1","SARS-CoV-2","CATTCACTTAAACAAA",4,30.16,9.49,-1.27,0.09,2.83,1.06,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","CATTCACTTCTAAATG",7,76.52,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G51S L95N T148A F160S",4
"lib1","SARS-CoV-2","CATTCAGCGCCAAACA",1,20.86,9.74,-1.02,0.22,1.86,1.05,0.03,">1 nonsynonymous","T55E I88C P149S",3
"lib1","SARS-CoV-2","CATTCATAAAGATGCC",1,34.25,8.55,-2.22,0.3,1.5,1.29,0.03,">1 nonsynonymous","S45H L95T L187I T201K",4
"lib1","SARS-CoV-2","CATTCATAGTCAGTTT",2,36.04,10.5,-0.26,0.11,2.92,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CATTCATATCACCATT",7,202.56,10.73,-0.03,0.06,2.91,1.05,0,"1 nonsynonymous","T46L",1
"lib1","SARS-CoV-2","CATTCATCATCCCACA",4,113.5,10.18,-0.58,0.04,2.86,1,0,">1 nonsynonymous","G116A E141L",2
"lib1","SARS-CoV-2","CATTCATCCCCCGTTG",3,44.07,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y35G K94Q N107T",3
"lib1","SARS-CoV-2","CATTCATTTTCGTTAG",9,89.66,10.69,-0.08,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTCCAAATAAATGG",11,73.47,10.27,-0.49,0.07,2.77,1,0,">1 nonsynonymous","K56F S139R",2
"lib1","SARS-CoV-2","CATTCCAACGTTACTT",6,106.55,6.12,-4.65,0.79,1.5,1.19,0.02,">1 nonsynonymous","D68V S129F",2
"lib1","SARS-CoV-2","CATTCCAAGAGCGAAC",7,176.56,9.9,-0.86,0.06,2.66,1.03,0,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","CATTCCAATTACCATT",2,49.8,10.72,-0.04,0.06,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTCCACGAACCACC",1,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L L183N",2
"lib1","SARS-CoV-2","CATTCCAGCCTGTTAG",1,51.25,8.7,-2.06,0.23,1.5,1.04,0.02,">1 nonsynonymous","L38V Q84W K87W P149G",4
"lib1","SARS-CoV-2","CATTCCATACCAGTCA",6,102.45,9.9,-0.86,0.1,2.28,1.05,0,">1 nonsynonymous","F8V P149I Q163T",3
"lib1","SARS-CoV-2","CATTCCCAAGTATAGT",1,23.85,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6L F99P",2
"lib1","SARS-CoV-2","CATTCCCATCCAATCG",4,37.73,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L162S F167M",2
"lib1","SARS-CoV-2","CATTCCCCTATAAGAG",6,7.4,NA,NA,NA,NA,NA,NA,"stop","A42R K128*",2
"lib1","SARS-CoV-2","CATTCCCCTTTAAAGT",9,3.32,NA,NA,NA,NA,NA,NA,"stop","T85K G146W F156* L162F",4
"lib1","SARS-CoV-2","CATTCCGAAAATATAA",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P G74T L95E W106Q E141C",5
"lib1","SARS-CoV-2","CATTCCGAAAGCAATT",2,22.51,8.14,-2.62,0.19,1.5,1.05,0.01,">1 nonsynonymous","V11D N107S I142L",3
"lib1","SARS-CoV-2","CATTCCGATAATACCG",6,1.07,NA,NA,NA,NA,NA,NA,"stop","Q84* L122V",2
"lib1","SARS-CoV-2","CATTCCGTCTACGTGT",7,41.64,8.84,-1.93,0.35,1.5,1,0.05,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","CATTCCTTACCAAAAT",1,27.14,9.76,-1.01,0.12,1.71,1.15,0,">1 nonsynonymous","V37N A105V T140I",3
"lib1","SARS-CoV-2","CATTCCTTATATAAAT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","I2K N64* W106K R136W",4
"lib1","SARS-CoV-2","CATTCGAAAACGATCA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","F62*",1
"lib1","SARS-CoV-2","CATTCGAATCATATTA",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A S36R F44L G51Y C102L N118S K198I",7
"lib1","SARS-CoV-2","CATTCGAATCCCAACC",4,79.77,10.7,-0.06,0.08,2.88,1.07,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","CATTCGACAATGACAG",3,0,NA,NA,NA,NA,NA,NA,"stop","V11* P149G",2
"lib1","SARS-CoV-2","CATTCGACGAACCGTG",5,168.76,10.2,-0.57,0.04,2.84,1.05,0,">1 nonsynonymous","S41E Y66H V115E",3
"lib1","SARS-CoV-2","CATTCGACTAAAAGTA",7,27.54,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","C6Y Y39R L60M T100S Q168W G174V",6
"lib1","SARS-CoV-2","CATTCGACTAAAGCCT",3,38.51,9.73,-1.04,0.32,1.71,1.12,0.05,">1 nonsynonymous","S45V N64I D98E K132T F160Y",5
"lib1","SARS-CoV-2","CATTCGAGAGAAGACA",1,36.4,10.26,-0.5,0.06,2.8,1,0,">1 nonsynonymous","S41R R136M",2
"lib1","SARS-CoV-2","CATTCGATCCAGGCGC",3,0.43,NA,NA,NA,NA,NA,NA,"stop","G9F T15Y R127N F134*",4
"lib1","SARS-CoV-2","CATTCGATGAATTTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N107D T170*",2
"lib1","SARS-CoV-2","CATTCGCACCATGCGA",1,67.58,10.82,0.05,0.06,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CATTCGCCATAAATTA",2,22.75,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N40D K48G Q176Y",3
"lib1","SARS-CoV-2","CATTCGGTGAATTGAA",10,2.73,NA,NA,NA,NA,NA,NA,"stop","E10S V103Y Y123A P161* P169D Y175*",6
"lib1","SARS-CoV-2","CATTCGGTGAGAGAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* I80W N107S P149R T201P",5
"lib1","SARS-CoV-2","CATTCGTAACAGGTCA",2,8.62,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S41A N92L",2
"lib1","SARS-CoV-2","CATTCGTATTGATTAA",5,36.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6K I88N Y178L",3
"lib1","SARS-CoV-2","CATTCGTCAAATATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* F8C K26*",3
"lib1","SARS-CoV-2","CATTCGTCCTAAGGAG",5,37.95,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V11D D68G I104S G117R P149A",5
"lib1","SARS-CoV-2","CATTCGTTATGACACC",5,45.84,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C31T G146A P161H",3
"lib1","SARS-CoV-2","CATTCTAAACAAGCAA",6,2.3,NA,NA,NA,NA,NA,NA,"stop","A14D Q84*",2
"lib1","SARS-CoV-2","CATTCTAACACTTTGA",2,12.71,10.85,0.09,0.18,2.74,1.05,0.02,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","CATTCTAATAAATGCC",2,52.19,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N4F Y50T T55I D97F",4
"lib1","SARS-CoV-2","CATTCTAATAAGCGGC",8,5.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E G86A N130L N171S V180D",5
"lib1","SARS-CoV-2","CATTCTAATCCATTCA",7,213.56,8.65,-2.11,0.07,2.81,1.07,0,">1 nonsynonymous","Q84L G117L L122S",3
"lib1","SARS-CoV-2","CATTCTACCACCCCCA",1,28.92,9.96,-0.81,0.14,2.56,1.11,0.01,">1 nonsynonymous","C6F E10A",2
"lib1","SARS-CoV-2","CATTCTACCGACTGAA",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C Y91N S139G",3
"lib1","SARS-CoV-2","CATTCTAGATAAATTA",5,92.46,10.61,-0.15,0.04,2.75,1.07,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CATTCTATATAACAAT",1,10.88,10.41,-0.35,0.08,2.91,1,0,">1 nonsynonymous","V37T K48Y",2
"lib1","SARS-CoV-2","CATTCTATGTATAACA",7,101.35,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y21R Q79M D90V",3
"lib1","SARS-CoV-2","CATTCTCATTATGTGT",13,327.43,8.97,-1.79,0.11,2.04,1.11,0.01,">1 nonsynonymous","F62D P177A",2
"lib1","SARS-CoV-2","CATTCTCCCATCTACA",10,277.97,10.47,-0.29,0.04,2.88,1.03,0,">1 nonsynonymous","T3G T100S",2
"lib1","SARS-CoV-2","CATTCTCGATGCAACC",1,16.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P96H N130S Y178V",3
"lib1","SARS-CoV-2","CATTCTCGTTCCCCTG",3,22.7,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5V S53I A89M N120H P161L",5
"lib1","SARS-CoV-2","CATTCTGTCAGATACT",6,46.26,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","F47N T100G",2
"lib1","SARS-CoV-2","CATTCTTAAATCCACC",9,87.41,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N24L A89Q G117T",3
"lib1","SARS-CoV-2","CATTCTTAATTACAAG",2,35.99,9.54,-1.23,0.16,1.78,1.16,0.01,">1 nonsynonymous","T3N S45V G152R P197D",4
"lib1","SARS-CoV-2","CATTCTTCAACAAAAG",4,36.57,10.27,-0.5,0.06,3,1.01,0,"1 nonsynonymous","A145E",1
"lib1","SARS-CoV-2","CATTCTTGGGGTTAGG",1,38.59,9.92,-0.85,0.12,2.78,1.05,0.01,">1 nonsynonymous","N120R Q144L",2
"lib1","SARS-CoV-2","CATTCTTTACCTTCAA",2,68.56,10.62,-0.14,0.05,2.86,1,0,"1 nonsynonymous","P54C",1
"lib1","SARS-CoV-2","CATTCTTTGTAGGTTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib1","SARS-CoV-2","CATTGAAACAATCACA",8,94.7,10.14,-0.63,0.04,2.75,1.06,0,">1 nonsynonymous","D34N S43N V52M",3
"lib1","SARS-CoV-2","CATTGAAACGCACGTT",8,93.48,10.84,0.07,0.07,2.86,1.1,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","CATTGAAACTCCCCTA",2,64.5,10.62,-0.15,0.1,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTGAAAGCAAGGGA",1,14.07,6,-4.76,1.86,1.5,1.14,0.02,">1 nonsynonymous","L5S W23K F47N C61P E141A P161T",6
"lib1","SARS-CoV-2","CATTGAACAGGCAGAA",2,9.07,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","V77R P149I C158R",3
"lib1","SARS-CoV-2","CATTGAACCATACAAA",2,43.24,6,-4.76,1.85,1.5,1.15,0.01,">1 nonsynonymous","S19M S53L D112G E141S",4
"lib1","SARS-CoV-2","CATTGAACCATGAAAG",5,70.1,10.39,-0.37,0.05,2.93,1.03,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","CATTGAAGAAAATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G F99G",2
"lib1","SARS-CoV-2","CATTGAAGAAGATGTA",5,93.63,6,-4.76,1.89,1.5,1.15,0,">1 nonsynonymous","T55L R127V E141M",3
"lib1","SARS-CoV-2","CATTGAAGATGATGGT",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F99T V103Y",3
"lib1","SARS-CoV-2","CATTGAAGGCAATTCC",5,56.24,10.68,-0.09,0.05,2.91,1.03,0,">1 nonsynonymous","K56V T201P",2
"lib1","SARS-CoV-2","CATTGAATGATCCACA",2,5.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V20W F70L P149N",3
"lib1","SARS-CoV-2","CATTGAATGTGCGCAG",1,34.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y50W D90N R124L",3
"lib1","SARS-CoV-2","CATTGAATGTGTGTGA",2,1.16,NA,NA,NA,NA,NA,NA,"stop","I2M Y35D T55F V103M K114* S129A",6
"lib1","SARS-CoV-2","CATTGAATTCTTGATT",3,69.99,9.19,-1.57,0.07,2.72,1.09,0,">1 nonsynonymous","K87S G155W",2
"lib1","SARS-CoV-2","CATTGAATTTATTCCT",6,121.39,10.17,-0.59,0.08,2.59,1,0,">1 nonsynonymous","F8M P133E",2
"lib1","SARS-CoV-2","CATTGACCGACCCCGA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","T3A F44V K132* Y143* S184L",5
"lib1","SARS-CoV-2","CATTGACCTGAGTTCA",3,16.99,10.61,-0.15,0.08,2.97,1,0,">1 nonsynonymous","D90E H189Y",2
"lib1","SARS-CoV-2","CATTGACGAAAGCTAT",3,38.97,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","K48N R73L A89V Y143L",4
"lib1","SARS-CoV-2","CATTGACTATAAGGAC",6,81.1,10.74,-0.02,0.06,2.92,1.02,0,">1 nonsynonymous","N110R K132L",2
"lib1","SARS-CoV-2","CATTGACTCAAATCAT",2,24.73,10.89,0.13,0.1,2.91,1,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CATTGACTCATATAGT",5,16.37,6,-4.76,2,3,1.06,0,">1 nonsynonymous","Y35L D68M A105R R136G",4
"lib1","SARS-CoV-2","CATTGACTTTGAATAT",2,37.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9R F70L D112M N130E Q163M",5
"lib1","SARS-CoV-2","CATTGAGATTGCAAAT",2,32.2,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N107T S113I S139N S147P Q176E",5
"lib1","SARS-CoV-2","CATTGAGTAATAAATG",7,64.92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V103A Q163Y R179G",3
"lib1","SARS-CoV-2","CATTGATAGCGAGTGA",5,102.84,10.8,0.03,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTGATCAATTGTAA",3,5.72,6.97,-3.79,0.61,1.5,1,0.07,">1 nonsynonymous","D90P D97G S200I",3
"lib1","SARS-CoV-2","CATTGATGCACCCAAG",3,34.62,8.41,-2.35,0.13,2.02,1.11,0.01,">1 nonsynonymous","G9M S113I",2
"lib1","SARS-CoV-2","CATTGATGCTCGATAT",2,15.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","W23Y A89N E154N",3
"lib1","SARS-CoV-2","CATTGATTATAATACG",7,53.19,7.19,-3.57,0.23,1.58,1.12,0.02,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","CATTGATTGTCTAGTA",4,516.79,9.32,-1.44,0.14,1.67,1.11,0.01,">1 nonsynonymous","S41T V65E",2
"lib1","SARS-CoV-2","CATTGCAACCAAGATC",5,52.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N64Y N120P N151F G155Y Y165D",5
"lib1","SARS-CoV-2","CATTGCAATAGAAAAA",2,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D Y123W T148S",3
"lib1","SARS-CoV-2","CATTGCACTATATACA",5,52.12,10.28,-0.48,0.06,2.72,1.07,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CATTGCAGGACCTAGA",3,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T L60A G86T T170Y V181S",5
"lib1","SARS-CoV-2","CATTGCATTCCTCTCC",1,14.16,8.28,-2.48,0.21,2.59,1.02,0.02,">1 nonsynonymous","T55H N120K N157C",3
"lib1","SARS-CoV-2","CATTGCGCCACATCAT",8,96.52,10.63,-0.13,0.03,2.94,1,0,">1 nonsynonymous","L60K D90K",2
"lib1","SARS-CoV-2","CATTGCGCTCATAATG",3,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I A81Q Y119I S139A",4
"lib1","SARS-CoV-2","CATTGCTACTCCTTGC",8,38.73,6.06,-4.71,1.55,1.5,1.32,0.06,">1 nonsynonymous","N13T S19K A33G G51V",4
"lib1","SARS-CoV-2","CATTGCTGACGGTTCA",1,15.12,10.81,0.05,0.1,2.98,1,0,">1 nonsynonymous","S29T S41A T201Y",3
"lib1","SARS-CoV-2","CATTGCTTAAGACTGG",4,0.34,NA,NA,NA,NA,NA,NA,"stop","W23F Y39V F99L P149* G155*",5
"lib1","SARS-CoV-2","CATTGGAAGTTAAGCA",1,20.97,6.59,-4.18,0.58,1.5,1.1,0.03,">1 nonsynonymous","T15Y Y91S I138T C150S",4
"lib1","SARS-CoV-2","CATTGGATAGATAGAG",7,108.6,10.34,-0.42,0.05,2.88,1.05,0,">1 nonsynonymous","I28V P149V",2
"lib1","SARS-CoV-2","CATTGGCCATCACTGT",1,11.62,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","Y21G C61R R136T",3
"lib1","SARS-CoV-2","CATTGGCCATTACAAA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","N4S E10K R16G N120T N171*",5
"lib1","SARS-CoV-2","CATTGGCTATCAGCAT",4,22.7,8.26,-2.5,0.1,2.18,1.02,0,">1 nonsynonymous","K87E I104A V173P",3
"lib1","SARS-CoV-2","CATTGGGGTAATATCA",2,11.94,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L95A T170K",2
"lib1","SARS-CoV-2","CATTGGGGTCGACCTG",10,112.41,10.08,-0.69,0.09,2.45,1.08,0,">1 nonsynonymous","P96R N110S",2
"lib1","SARS-CoV-2","CATTGGTAGTTACTTG",11,153.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19T Y39V N64D T148I Y165A",5
"lib1","SARS-CoV-2","CATTGGTGGGAGTATA",1,70.85,10.46,-0.3,0.04,2.94,1,0,">1 nonsynonymous","T15L Y91F K128S",3
"lib1","SARS-CoV-2","CATTGTAAAAAATCCC",4,38.4,10.73,-0.04,0.05,2.95,1.03,0,"1 nonsynonymous","G51Q",1
"lib1","SARS-CoV-2","CATTGTACCAGCAAAG",4,42.42,6,-4.76,2,3,1.14,0,">1 nonsynonymous","D34K K48F K87Y F99S F156R K199F",6
"lib1","SARS-CoV-2","CATTGTAGGTTCCTCC",2,29.01,10.62,-0.14,0.08,2.93,1.01,0,">1 nonsynonymous","E10K G152N",2
"lib1","SARS-CoV-2","CATTGTAGTAAGAGAT",4,44.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14I L38H I72K G86W G101D N151K",6
"lib1","SARS-CoV-2","CATTGTATAGACAGGA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29A V103L",2
"lib1","SARS-CoV-2","CATTGTATAGTGCCCG",2,9.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15L I28R T148R V194D",4
"lib1","SARS-CoV-2","CATTGTATGTGGAAAA",4,2.72,NA,NA,NA,NA,NA,NA,"stop","N1* Y50S N64T I88C D112G K132T T148F F185H",8
"lib1","SARS-CoV-2","CATTGTCAGCCCCAAA",4,5.76,7.19,-3.57,0.17,1.5,1.01,0,">1 nonsynonymous","S53F I104N P149R T201H",4
"lib1","SARS-CoV-2","CATTGTCTAACTGTCC",8,103.11,10.38,-0.39,0.05,2.84,1.02,0,">1 nonsynonymous","S36V S53R",2
"lib1","SARS-CoV-2","CATTGTGATTAGGCCT",2,10.16,10.11,-0.65,0.12,2.84,1.12,0.01,">1 nonsynonymous","S41K T85A F126L",3
"lib1","SARS-CoV-2","CATTGTGGAAAGAGTA",1,11.1,6,-4.76,2,3,1.08,0.02,">1 nonsynonymous","L60S Q84D N107V",3
"lib1","SARS-CoV-2","CATTGTTAATAGCCCA",4,6.48,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F134L S184P",2
"lib1","SARS-CoV-2","CATTGTTACCGTTTAT",3,5.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52D D90S T100L N107F F126V",5
"lib1","SARS-CoV-2","CATTGTTACGTATCTA",1,27.44,10.63,-0.14,0.06,3,1.01,0,">1 nonsynonymous","V37G K114I",2
"lib1","SARS-CoV-2","CATTGTTCACAGTTAG",4,78.51,10.14,-0.62,0.04,2.75,1.03,0,">1 nonsynonymous","G83A D98V Y178H",3
"lib1","SARS-CoV-2","CATTGTTCTATAGCCT",7,177.6,10.7,-0.06,0.05,2.9,1.06,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","CATTGTTTATTACATT",1,98.02,7.82,-2.95,0.09,2.14,1.12,0,">1 nonsynonymous","V32R Y143K",2
"lib1","SARS-CoV-2","CATTTAAAAAGAGCTA",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100L D137T N157V",3
"lib1","SARS-CoV-2","CATTTAAAATTAGCGA",4,1.8,NA,NA,NA,NA,NA,NA,"stop","G9V P133* G152F",3
"lib1","SARS-CoV-2","CATTTAAACCGACAAC",2,17.7,10.9,0.13,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTAAAGCATAGGT",7,5.18,NA,NA,NA,NA,NA,NA,"stop","S45F T63P V103G G117A Y123*",5
"lib1","SARS-CoV-2","CATTTAAAGGCCAAAC",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V I104L R127N V181P",4
"lib1","SARS-CoV-2","CATTTAAAGTAGAGTA",1,43.96,10.55,-0.21,0.05,2.91,1.08,0,">1 nonsynonymous","L5M G83N",2
"lib1","SARS-CoV-2","CATTTAAAGTTACATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I88T Y121* S129F F167L",4
"lib1","SARS-CoV-2","CATTTAAAGTTCAATA",3,19.04,6.46,-4.31,0.54,1.5,1.06,0.03,">1 nonsynonymous","S29L S41I K56Q A81T C150D F156L Q163A",7
"lib1","SARS-CoV-2","CATTTAACGACAGCGC",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T A67D A105C F167A",4
"lib1","SARS-CoV-2","CATTTAACGGTGTCAG",4,50.21,9.85,-0.92,0.07,1.91,1.06,0,">1 nonsynonymous","A22E I28L Y35T D90F E141T P197T",6
"lib1","SARS-CoV-2","CATTTAAGATTAAGGT",2,22.45,10.53,-0.23,0.09,2.77,1,0,">1 nonsynonymous","N1D D90A P149H",3
"lib1","SARS-CoV-2","CATTTAAGCATCCGGG",7,1166.57,10.18,-0.58,0.04,2.8,1,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CATTTAAGGGAACGGT",3,40.32,10.64,-0.12,0.06,2.9,1,0,"1 nonsynonymous","Y66Q",1
"lib1","SARS-CoV-2","CATTTACAAGGAAAAA",1,32.86,9.56,-1.2,0.15,2.17,1.09,0.01,">1 nonsynonymous","S41T N107T",2
"lib1","SARS-CoV-2","CATTTACAGAGAATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L R25M",2
"lib1","SARS-CoV-2","CATTTACAGATCTTAC",2,17.76,9.65,-1.12,0.17,1.94,1.22,0.01,">1 nonsynonymous","G9Y K114S L162C",3
"lib1","SARS-CoV-2","CATTTACCCAAAATAT",4,39.58,10.78,0.01,0.06,2.94,1.05,0,">1 nonsynonymous","T3I T100F",2
"lib1","SARS-CoV-2","CATTTACCCATTCACT",5,51.26,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","I88D I142S Q176E",3
"lib1","SARS-CoV-2","CATTTACCCCACAATG",5,61.65,8.49,-2.27,0.16,1.78,1.13,0.01,">1 nonsynonymous","A89M Y121L",2
"lib1","SARS-CoV-2","CATTTACCGATACTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","I88L S113* P197R",3
"lib1","SARS-CoV-2","CATTTACGGCCATCAG",7,55.53,10.79,0.02,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTACGTTTGATTC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","R127L T201*",2
"lib1","SARS-CoV-2","CATTTACTACCGCCGT",11,196.73,10.68,-0.09,0.07,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTACTTGAAATAG",2,43.3,10.31,-0.45,0.04,2.85,1.04,0,"1 nonsynonymous","Y178L",1
"lib1","SARS-CoV-2","CATTTAGAAACAAACA",3,8.44,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y35V I104K",2
"lib1","SARS-CoV-2","CATTTAGATATTTAAA",19,97.22,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","V103M R127S",2
"lib1","SARS-CoV-2","CATTTAGCACACAGAA",1,6.94,9.31,-1.45,0.22,2.7,1.24,0.01,">1 nonsynonymous","E10S P54R Y119S",3
"lib1","SARS-CoV-2","CATTTAGCGACAAAAT",7,65.93,10.49,-0.27,0.06,2.89,1.01,0,">1 nonsynonymous","V52Y T148N",2
"lib1","SARS-CoV-2","CATTTAGTTGCTTAAG",3,29.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4Y Y50W I104S N157H",4
"lib1","SARS-CoV-2","CATTTATCCCCTGACA",3,62.2,9.72,-1.04,0.15,1.81,1.1,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","CATTTATCTCAATAGA",1,3.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","CATTTATCTCGCGCTT",1,7.9,10.3,-0.47,0.16,2.74,1.16,0.01,">1 nonsynonymous","D90N D98F",2
"lib1","SARS-CoV-2","CATTTATGTATACAAG",4,0.73,NA,NA,NA,NA,NA,NA,"stop","V11M S36* G74M E135K C158S",5
"lib1","SARS-CoV-2","CATTTATTATTAGGAT",2,21.76,10.73,-0.03,0.1,2.64,1.27,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTATTTAGCCAGT",1,9.74,9.09,-1.68,0.25,1.5,1.16,0.03,">1 nonsynonymous","F8V Y35S P149Y",3
"lib1","SARS-CoV-2","CATTTCAAAATCCACA",3,81.5,9.69,-1.07,0.06,2.92,1.05,0,">1 nonsynonymous","Y119K K128V",2
"lib1","SARS-CoV-2","CATTTCACAAGTACAT",5,20.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","W23M F62R A89L",3
"lib1","SARS-CoV-2","CATTTCACCCCCCAAA",2,52.21,7.99,-2.78,0.48,1.5,1,0.08,">1 nonsynonymous","I88M V115K L122S G155H",4
"lib1","SARS-CoV-2","CATTTCAGCTAGCGTA",3,34.74,10.61,-0.16,0.07,2.81,1.12,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","CATTTCAGGCAACGAC",4,51.8,8.96,-1.81,0.22,1.58,1.12,0.02,">1 nonsynonymous","P96H N120W",2
"lib1","SARS-CoV-2","CATTTCATACAAGCCC",18,318.41,10.75,-0.01,0.05,2.85,1.09,0,"1 nonsynonymous","T55F",1
"lib1","SARS-CoV-2","CATTTCCAATCCAGAA",1,18.93,10.38,-0.38,0.12,2.73,1.04,0.01,">1 nonsynonymous","G83Y D97V",2
"lib1","SARS-CoV-2","CATTTCCCAAAGAAAG",5,156.45,10.77,0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTCCCACTAAGAG",5,70.81,10.76,0,0.05,2.93,1.04,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","CATTTCCCCGAATAAT",6,72.17,10.5,-0.26,0.04,2.95,1.02,0,">1 nonsynonymous","T85Y F134Y N171S",3
"lib1","SARS-CoV-2","CATTTCCCGGAACCAC",1,26.53,10.79,0.03,0.1,2.94,1.03,0,">1 nonsynonymous","Y35F G152S",2
"lib1","SARS-CoV-2","CATTTCCGATCCCCCA",1,5.08,9.96,-0.8,0.34,1.79,1,0.05,">1 nonsynonymous","K128A E135W E141V",3
"lib1","SARS-CoV-2","CATTTCCTTGAAGATA",3,10.96,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","Y121F V182K C195R",3
"lib1","SARS-CoV-2","CATTTCGAATCCAAAC",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A D68R V103Q T201R",4
"lib1","SARS-CoV-2","CATTTCGATAACAAGT",4,16.12,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C31T N58C V182R",3
"lib1","SARS-CoV-2","CATTTCGTCAGATCCC",4,28.32,10.47,-0.3,0.07,2.9,1.01,0,">1 nonsynonymous","T63L S164C",2
"lib1","SARS-CoV-2","CATTTCTAATAATAGC",8,159.4,10.24,-0.52,0.04,2.94,1.02,0,">1 nonsynonymous","I142M Q168M",2
"lib1","SARS-CoV-2","CATTTCTAGTCTGAAC",5,136.16,10.21,-0.55,0.05,2.88,1.01,0,"1 nonsynonymous","L57T",1
"lib1","SARS-CoV-2","CATTTCTCATCTGATT",8,183.2,9.76,-1,0.09,1.96,1.05,0,"1 nonsynonymous","V11G",1
"lib1","SARS-CoV-2","CATTTCTCCCTCAAAG",5,11.67,7.39,-3.37,0.44,1.9,1.2,0.05,">1 nonsynonymous","I104D Y143R P149Y",3
"lib1","SARS-CoV-2","CATTTCTCCTGTCCTT",3,36.56,10.78,0.02,0.07,2.89,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTCTCTGCAGGGA",2,44.1,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L95C Y119L P177T",3
"lib1","SARS-CoV-2","CATTTCTGCCCGGAGT",3,46.86,9.61,-1.16,0.11,1.99,1.04,0.01,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","CATTTGAAGCGCCACC",1,34.95,10.06,-0.7,0.14,2.44,1.04,0.01,"1 nonsynonymous","P133R",1
"lib1","SARS-CoV-2","CATTTGAATCCCCAGC",1,18.78,10.63,-0.13,0.08,2.88,1,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","CATTTGAATGAACACA",5,56.46,10.66,-0.11,0.05,2.91,1.04,0,"1 nonsynonymous","S184K",1
"lib1","SARS-CoV-2","CATTTGACAAAAGCTT",2,12.53,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42C K48C I88Y I104W",4
"lib1","SARS-CoV-2","CATTTGACAATCTTTA",2,29.73,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S36G F99E T140H",3
"lib1","SARS-CoV-2","CATTTGACATACCCCG",1,44.4,7.88,-2.88,0.29,1.5,1.08,0.03,">1 nonsynonymous","V32R F62L D98N V103M N120S",5
"lib1","SARS-CoV-2","CATTTGAGTGTTGATG",3,44.97,10.84,0.08,0.1,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CATTTGAGTTAGCAGG",4,15.22,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N4T C49N K114Y P177Y",4
"lib1","SARS-CoV-2","CATTTGATGGAATGAA",9,134.18,9.96,-0.8,0.08,2.56,1.05,0,">1 nonsynonymous","T3G Y91A Q168A",3
"lib1","SARS-CoV-2","CATTTGATTAACAAAA",3,25.15,7.63,-3.13,0.25,1.5,1.01,0.03,">1 nonsynonymous","A18M S41N G83H L162S K198G",5
"lib1","SARS-CoV-2","CATTTGCAATGCTAAA",5,52.21,9.87,-0.9,0.14,1.88,1.08,0.01,">1 nonsynonymous","A105T W106V L187I",3
"lib1","SARS-CoV-2","CATTTGCCACAACTTG",4,0,NA,NA,NA,NA,NA,NA,"stop","F8A T15*",2
"lib1","SARS-CoV-2","CATTTGCCCAAATTGT",2,97.23,10.73,-0.03,0.06,2.9,1.06,0,">1 nonsynonymous","G9S A33F",2
"lib1","SARS-CoV-2","CATTTGCCCCGTATTC",1,16.2,9.51,-1.26,0.18,2.32,1,0.01,">1 nonsynonymous","C6A S53T I88V V173D",4
"lib1","SARS-CoV-2","CATTTGCTGCCGCGTT",2,13.26,6.74,-4.03,0.37,1.76,1.01,0.02,">1 nonsynonymous","V103T S108Y",2
"lib1","SARS-CoV-2","CATTTGGATACTACTA",2,39.7,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G166R Q176P",2
"lib1","SARS-CoV-2","CATTTGGCGGGAAAAA",3,0.44,NA,NA,NA,NA,NA,NA,"stop","Y35* L57V D90W",3
"lib1","SARS-CoV-2","CATTTGGGTATGCCAT",17,224.38,10.8,0.03,0.06,2.91,1.06,0,"1 nonsynonymous","K199W",1
"lib1","SARS-CoV-2","CATTTGGTAAAGAAAG",1,32.25,10.72,-0.05,0.03,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CATTTGTAAAAATATT",3,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64E C102N",2
"lib1","SARS-CoV-2","CATTTGTAAGGCCACC",2,6.93,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T3P L60R R73L P82W",4
"lib1","SARS-CoV-2","CATTTGTCTCATAGGT",1,8.54,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A14S Y39T G86K C158F",4
"lib1","SARS-CoV-2","CATTTGTTGTGCATTT",2,31,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9R L38A V71C G86L I142R P149S G155I",7
"lib1","SARS-CoV-2","CATTTTAACCTATGTT",1,26.6,9.81,-0.95,0.11,2,1.05,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","CATTTTAATCCTCCAC",10,77.21,10.7,-0.06,0.06,2.94,1.03,0,"1 nonsynonymous","G51K",1
"lib1","SARS-CoV-2","CATTTTAATGCCGATA",3,29.42,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F8A Y21V Y39S Y93F A105R N118H R124E T148L",8
"lib1","SARS-CoV-2","CATTTTACCGGTAACG",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R T85A Y93I",3
"lib1","SARS-CoV-2","CATTTTACGCAAACAC",4,82.96,8.61,-2.16,0.06,2.66,1.13,0,"1 nonsynonymous","Y143C",1
"lib1","SARS-CoV-2","CATTTTACGTAAATAT",2,16.64,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","C6F P82D P133W",3
"lib1","SARS-CoV-2","CATTTTACTTGATCTA",1,48.33,9.39,-1.38,0.17,1.76,1.09,0.01,">1 nonsynonymous","G9T K132P Q144S L183I S200H",5
"lib1","SARS-CoV-2","CATTTTAGCGAAGTTG",3,17.9,6,-4.76,2,3,1.21,0,">1 nonsynonymous","E10T F70L D98W L122M Q144H",5
"lib1","SARS-CoV-2","CATTTTATCCCCGCTG",11,46.65,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","L60M I88T G152I",3
"lib1","SARS-CoV-2","CATTTTATCTCAAAGG",2,49.41,6.34,-4.43,0.63,1.5,1.15,0.03,">1 nonsynonymous","S45F S113M",2
"lib1","SARS-CoV-2","CATTTTATGCAGACCT",4,27.43,10.05,-0.71,0.06,2.99,1,0,"1 nonsynonymous","T170G",1
"lib1","SARS-CoV-2","CATTTTCAGATCTAAC",3,18.46,10.62,-0.14,0.1,2.82,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","CATTTTCAGATTGAAA",3,32.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3G F47Y L60H T100G N157L",5
"lib1","SARS-CoV-2","CATTTTCAGGCCGGTT",3,84.45,10.84,0.07,0.05,2.94,1.03,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","CATTTTCATGCTGTGA",2,6.84,7.37,-3.4,0.41,1.5,1.1,0.05,">1 nonsynonymous","F47K N107R L122Q S129G P149D T201K",6
"lib1","SARS-CoV-2","CATTTTCTGGGATAAC",4,21.4,8.89,-1.87,0.39,1.62,1.19,0.06,">1 nonsynonymous","F44C D97I F185Y",3
"lib1","SARS-CoV-2","CATTTTGAACCGACAG",1,10.31,9.39,-1.38,0.22,2.19,1.06,0.02,">1 nonsynonymous","L111S N130M Y143F S184K",4
"lib1","SARS-CoV-2","CATTTTGAGCCCTATA",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P L162V",2
"lib1","SARS-CoV-2","CATTTTGCTCTGTGAT",6,30.7,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","R127V Y159W",2
"lib1","SARS-CoV-2","CATTTTGGTAAACTTC",2,3.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173M",1
"lib1","SARS-CoV-2","CATTTTGTAAAGAAAA",5,44.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G L131F S184K",3
"lib1","SARS-CoV-2","CATTTTGTTAGGCTAC",7,71.02,9.97,-0.8,0.08,2.14,1.08,0,">1 nonsynonymous","G9S A89Y",2
"lib1","SARS-CoV-2","CATTTTTACCATTTTT",1,25.62,6.16,-4.61,0.56,1.5,1.15,0.01,">1 nonsynonymous","T85V V103Y Y119S I142L T148S T201R",6
"lib1","SARS-CoV-2","CATTTTTACTAATTCA",4,7.64,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C6K F44A P161R",3
"lib1","SARS-CoV-2","CATTTTTAGTAAGCAA",1,11.83,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","E10N D34L I138T F167V G174M T201C",6
"lib1","SARS-CoV-2","CATTTTTATACCCCCT",3,54.28,9.91,-0.86,0.08,2.44,1.04,0,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","CATTTTTATTTATCAA",6,48.2,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N24V K56E A81R Y121I F134A G174L",6
"lib1","SARS-CoV-2","CATTTTTCCATAAGGC",7,84.25,6.17,-4.6,0.77,1.5,1.21,0.02,">1 nonsynonymous","I138F Y165P Y175I",3
"lib1","SARS-CoV-2","CATTTTTGGAATACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","V20E C61A A89* K128F S139M",5
"lib1","SARS-CoV-2","CATTTTTGTAAATAAT",1,30.3,9.62,-1.14,0.18,1.89,1.18,0.01,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","CATTTTTTAAAAGATA",4,93.99,9.92,-0.84,0.05,2.89,1.02,0,"1 nonsynonymous","R73S",1
"lib1","SARS-CoV-2","CATTTTTTACAAAATA",1,18.6,7.23,-3.53,0.53,1.5,1.17,0.06,">1 nonsynonymous","L60T C102A",2
"lib1","SARS-CoV-2","CATTTTTTACAGCCTT",3,28.35,6.03,-4.74,0.4,2.23,1.12,0,">1 nonsynonymous","Y50I N107M",2
"lib1","SARS-CoV-2","CATTTTTTTAACTGTT",6,27.06,6.42,-4.34,0.44,1.5,1.17,0.01,">1 nonsynonymous","R25S L60C P82G V103K R127Y T170V",6
"lib1","SARS-CoV-2","CATTTTTTTCACGTTA",3,14.33,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","CATTTTTTTGTTGGTA",4,60.54,10.67,-0.1,0.07,2.9,1.07,0,">1 nonsynonymous","T55G Y178H",2
"lib1","SARS-CoV-2","CCAAAAAAAAAAGAAA",1,15.65,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","N4T G9L D59S V103M P133T G146R N157T G166P",8
"lib1","SARS-CoV-2","CCAAAAAAAGCAACCA",9,35.07,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","F47S P82V S184C",3
"lib1","SARS-CoV-2","CCAAAAAAAGTAGCTA",1,5.71,11.12,0.36,0.17,2.91,1,0,"1 nonsynonymous","T55R",1
"lib1","SARS-CoV-2","CCAAAAAAATATTTGG",2,8.85,10.81,0.04,0.07,3,1,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","CCAAAAAAATTGGTCA",1,9.32,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","D59I P96S N107T G166S F185S",5
"lib1","SARS-CoV-2","CCAAAAAAATTTAATC",3,59.48,10.81,0.04,0.08,2.88,1.04,0,">1 nonsynonymous","S43M T148R T201I",3
"lib1","SARS-CoV-2","CCAAAAAACAAACTTT",5,54.18,10.56,-0.21,0.05,2.87,1,0,">1 nonsynonymous","F134A A192R",2
"lib1","SARS-CoV-2","CCAAAAAACATGGTAC",2,17.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L131W V181F",2
"lib1","SARS-CoV-2","CCAAAAAACTGATCAA",5,140.11,10.16,-0.61,0.06,2.67,1.01,0,">1 nonsynonymous","T15Y K128T T148V",3
"lib1","SARS-CoV-2","CCAAAAAACTTTCCAA",6,100.77,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11Q F62Y N107V G146V P161T",5
"lib1","SARS-CoV-2","CCAAAAAAGACAAATG",4,36.21,7.85,-2.91,0.22,1.5,1.11,0.02,">1 nonsynonymous","I72T L125Y P149M",3
"lib1","SARS-CoV-2","CCAAAAAAGATAAATC",3,25.93,9.48,-1.28,0.14,1.77,1.12,0.01,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","CCAAAAAATAAGAAAG",4,155.81,10.31,-0.46,0.04,2.82,1.03,0,">1 nonsynonymous","G83W S147L T201L",3
"lib1","SARS-CoV-2","CCAAAAAATATCCCCG",13,62.51,8.36,-2.41,0.2,1.5,1.22,0.02,">1 nonsynonymous","K94N N110Q N118V F160H",4
"lib1","SARS-CoV-2","CCAAAAAATCATCAAC",3,28.63,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K48W C61Q Y121S P133S",4
"lib1","SARS-CoV-2","CCAAAAAATCCCGCAT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N110* G155S K198D",3
"lib1","SARS-CoV-2","CCAAAAAATTAAAAAG",5,52.64,6,-4.76,2,3,1.24,0,">1 nonsynonymous","R25E D112W",2
"lib1","SARS-CoV-2","CCAAAAACCAGCGCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V I88M P96G",3
"lib1","SARS-CoV-2","CCAAAAACCCACTCGG",5,28.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25G V32R S45I",3
"lib1","SARS-CoV-2","CCAAAAACTCGCAGTA",2,16.9,6,-4.76,1.87,1.5,1.12,0.02,">1 nonsynonymous","W23P S36V R136C V180A",4
"lib1","SARS-CoV-2","CCAAAAACTCTAGCCT",4,65.23,10.63,-0.13,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAAAACTTCGAGTA",3,1.74,NA,NA,NA,NA,NA,NA,"stop","N4G S41E N58* V103R",4
"lib1","SARS-CoV-2","CCAAAAAGACGCCGAG",3,12.55,8.46,-2.3,0.14,3,1,0.01,"1 nonsynonymous","N157Y",1
"lib1","SARS-CoV-2","CCAAAAAGAGTATTAA",1,11.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20D I138M Q144E",3
"lib1","SARS-CoV-2","CCAAAAAGCAGTTGCG",3,75.39,10.04,-0.73,0.06,2.34,1.01,0,">1 nonsynonymous","N1R S36G C49W",3
"lib1","SARS-CoV-2","CCAAAAAGCGGACTTA",7,30.19,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V103K C158R T201G",3
"lib1","SARS-CoV-2","CCAAAAAGCTCCTCCA",1,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V D90T S129G T170Q Y178E",5
"lib1","SARS-CoV-2","CCAAAAAGGACAACAG",3,18.62,10.21,-0.56,0.07,2.81,1.05,0,">1 nonsynonymous","T3D G9V A33T",3
"lib1","SARS-CoV-2","CCAAAAAGGGCTGCTT",5,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27F",1
"lib1","SARS-CoV-2","CCAAAAAGTAAAAAGA",2,27.01,10.83,0.07,0.05,2.92,1.02,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","CCAAAAAGTAAGCCAT",13,220.43,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S113R R124H G146L",3
"lib1","SARS-CoV-2","CCAAAAAGTAGAGTGA",1,72.55,10.79,0.03,0.08,2.93,1.03,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","CCAAAAAGTATTACAA",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L K87D Y123D F134R E141K F156M P169K V181E",8
"lib1","SARS-CoV-2","CCAAAAAGTGAAGCCA",4,97.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12V G86Y N120A L131G Q176R",5
"lib1","SARS-CoV-2","CCAAAAATAATAATTA",1,14.35,9.89,-0.87,0.18,1.8,1.04,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","CCAAAAATCTGACCCG",4,33.4,9.52,-1.25,0.2,1.5,1.01,0.02,">1 nonsynonymous","W106L E141C",2
"lib1","SARS-CoV-2","CCAAAAATCTTATGTT",4,71.16,10.04,-0.73,0.07,2.2,1.02,0,">1 nonsynonymous","D75K T100S S108T A192T",4
"lib1","SARS-CoV-2","CCAAAAATGACACGGA",8,149.83,10.73,-0.03,0.05,2.91,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAAAAATTTCAATGG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I72Y P82* F160W P177C",4
"lib1","SARS-CoV-2","CCAAAAATTTGGGATT",7,29.16,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V103H K199L",2
"lib1","SARS-CoV-2","CCAAAACAAAAACGTT",2,39.45,10.72,-0.04,0.05,2.94,1.02,0,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","CCAAAACAAAATTAAA",3,44.34,8.53,-2.23,0.33,1.5,1.01,0.06,">1 nonsynonymous","S19Q G51N P133T",3
"lib1","SARS-CoV-2","CCAAAACAAAGAAGGT",6,2,NA,NA,NA,NA,NA,NA,"stop","T3* L60P G155K F167S T201W",5
"lib1","SARS-CoV-2","CCAAAACACCCTTTTC",1,40.94,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","V103C P161F Q168M",3
"lib1","SARS-CoV-2","CCAAAACAGAACACGA",4,25.84,7.56,-3.21,0.23,1.5,1.12,0.02,">1 nonsynonymous","A89F P149F",2
"lib1","SARS-CoV-2","CCAAAACATGTCCAAT",4,5.38,NA,NA,NA,NA,NA,NA,"stop","V115* C150M",2
"lib1","SARS-CoV-2","CCAAAACCAGATGAAT",3,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70N N107G V173L",3
"lib1","SARS-CoV-2","CCAAAACCCGAAACGT",1,124.23,10.3,-0.47,0.06,2.78,1.03,0,">1 nonsynonymous","K26E N130G",2
"lib1","SARS-CoV-2","CCAAAACCCGAACCCA",4,1.08,NA,NA,NA,NA,NA,NA,"stop","L5F S19M Y91* P96R N130M",5
"lib1","SARS-CoV-2","CCAAAACCTGCCCAGG",4,96.92,10.82,0.06,0.08,2.91,1.06,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","CCAAAACGATCAGCAA",1,566.71,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","V65W Y91F F167S",3
"lib1","SARS-CoV-2","CCAAAACGCTATTTGC",4,40.4,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V20E R27K I104Y",3
"lib1","SARS-CoV-2","CCAAAACGGCTAGGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","CCAAAACGGGAACACT",6,55.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C150K V153Q Y159R",3
"lib1","SARS-CoV-2","CCAAAACGGGCCCCAA",2,58.29,10.55,-0.22,0.07,2.95,1.03,0,">1 nonsynonymous","T55N S184R K199V",3
"lib1","SARS-CoV-2","CCAAAACTAAAAACTC",1,29.48,10.77,0.01,0.06,2.96,1.03,0,"1 nonsynonymous","S45D",1
"lib1","SARS-CoV-2","CCAAAACTAAGTTGAG",1,6.14,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V37I L57S N120F G146V",4
"lib1","SARS-CoV-2","CCAAAACTACAAGAAA",5,43.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","A14I N109H P133L V173G A192T K199Y",6
"lib1","SARS-CoV-2","CCAAAACTACCTCACA",2,37.87,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F8Q S139H P169V K198V",4
"lib1","SARS-CoV-2","CCAAAACTCACATTGA",4,824.6,8.65,-2.12,0.11,1.82,1.11,0,">1 nonsynonymous","Y50S F156L",2
"lib1","SARS-CoV-2","CCAAAACTGACGAAAA",2,16.21,10.37,-0.4,0.11,2.81,1.02,0,">1 nonsynonymous","T15R Y35P",2
"lib1","SARS-CoV-2","CCAAAACTGTGGGTAT",2,20.35,10.82,0.05,0.07,2.99,1,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","CCAAAACTTAAATATT",2,13.44,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y39T V182G",2
"lib1","SARS-CoV-2","CCAAAAGAATTACCCA",2,14.23,10.35,-0.42,0.08,3,1,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","CCAAAAGATCAAATAC",2,55,10.75,-0.02,0.07,2.9,1.06,0,">1 nonsynonymous","T100Q K198N",2
"lib1","SARS-CoV-2","CCAAAAGCGGAAAGAT",2,3.23,NA,NA,NA,NA,NA,NA,"stop","S53* G101V R127*",3
"lib1","SARS-CoV-2","CCAAAAGCGGTAGCCA",3,2.24,NA,NA,NA,NA,NA,NA,"stop","G9R V65P L122S S129F S200*",5
"lib1","SARS-CoV-2","CCAAAAGCTAAAAGAA",1,11.53,10.86,0.1,0.06,2.87,1.05,0,"1 nonsynonymous","N1F",1
"lib1","SARS-CoV-2","CCAAAAGGAATAGTCC",2,34.3,9.05,-1.72,0.25,1.5,1,0.03,">1 nonsynonymous","N4W T63W T85Y",3
"lib1","SARS-CoV-2","CCAAAAGGGATTAACC",4,92.56,10.76,0,0.08,2.96,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAAAAGTATAACATG",1,10.82,9.46,-1.31,0.13,2.56,1.12,0.01,">1 nonsynonymous","C49V F134Y",2
"lib1","SARS-CoV-2","CCAAAAGTCTAGTACT",3,25.46,10.85,0.09,0.07,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAAAGTTTTACCAT",2,0.19,NA,NA,NA,NA,NA,NA,"stop","A14* V20L C61* S108R E141G",5
"lib1","SARS-CoV-2","CCAAAATAACGACATG",4,60.42,10.81,0.04,0.06,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAAATAATAAAAGC",2,23.11,6,-4.76,1.76,3,1.11,0,">1 nonsynonymous","K56W Y165C",2
"lib1","SARS-CoV-2","CCAAAATAATCCCAGA",5,72.55,10.68,-0.08,0.04,2.95,1.01,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","CCAAAATACAGATAAT",1,16.76,8.85,-1.91,0.21,1.5,1.01,0.02,">1 nonsynonymous","L5E K48G Y143L",3
"lib1","SARS-CoV-2","CCAAAATAGCCATTTA",5,34.37,10.03,-0.74,0.16,2.32,1.04,0.01,"1 nonsynonymous","A14P",1
"lib1","SARS-CoV-2","CCAAAATATTGCACTA",1,75.08,10.73,-0.04,0.04,2.92,1.02,0,">1 nonsynonymous","G9E K132D K198L",3
"lib1","SARS-CoV-2","CCAAAATCCTTTGATT",5,18.29,6.21,-4.55,0.51,1.93,1.13,0.01,">1 nonsynonymous","D59S A89T V103C G152F K198R",5
"lib1","SARS-CoV-2","CCAAAATGCATTCAAC",3,58.91,10.13,-0.64,0.08,2.73,1,0,">1 nonsynonymous","T15S S43Y K94C A192T",4
"lib1","SARS-CoV-2","CCAAAATGCTACGATG",2,6.15,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","K56H A145R C150I G174E",4
"lib1","SARS-CoV-2","CCAAAATTAGCAGTCG",6,129.17,10.05,-0.72,0.05,2.79,1.03,0,">1 nonsynonymous","T3F I138D N151T",3
"lib1","SARS-CoV-2","CCAAAATTTATTAAGA",4,10.85,6.66,-4.11,0.51,1.5,1.26,0.03,">1 nonsynonymous","N24K D97I I104T Y123L F156L N171C",6
"lib1","SARS-CoV-2","CCAAACAACAATCTCA",3,57.01,10.75,-0.02,0.05,2.91,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAAACAACGTTCAAT",7,88.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39T S108R S113Y I142L",4
"lib1","SARS-CoV-2","CCAAACAACTACTGTC",10,123.95,10.59,-0.18,0.03,2.93,1.01,0,">1 nonsynonymous","F44L S147D",2
"lib1","SARS-CoV-2","CCAAACAACTAGCTTG",3,64.86,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S139Y Q176P F185I",3
"lib1","SARS-CoV-2","CCAAACAAGATAAAAC",8,103.3,10.72,-0.04,0.04,2.94,1.04,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","CCAAACAAGCCTACAA",1,9.15,10.63,-0.13,0.15,2.71,1.06,0.01,">1 nonsynonymous","T63V Y66C F160S",3
"lib1","SARS-CoV-2","CCAAACAAGGAGCAAT",15,2.36,NA,NA,NA,NA,NA,NA,"stop","R73* Y119T Q168P",3
"lib1","SARS-CoV-2","CCAAACAAGTGACATG",12,2.62,NA,NA,NA,NA,NA,NA,"stop","L5E L60* E141M C150F",4
"lib1","SARS-CoV-2","CCAAACAATCAACTCT",2,20.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P F17V Y35A N110K",4
"lib1","SARS-CoV-2","CCAAACACCTTAGTAA",3,179.57,10.73,-0.04,0.06,2.81,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAACACCTTGCTTA",3,3.55,NA,NA,NA,NA,NA,NA,"stop","V20G G83L S108* Q163N",4
"lib1","SARS-CoV-2","CCAAACACGTCCCGCT",6,58.78,8.42,-2.34,0.21,1.62,1.15,0.02,">1 nonsynonymous","V11Y G116L G117S",3
"lib1","SARS-CoV-2","CCAAACAGCCGTAGCG",1,24.66,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Y50M F99H K199M",3
"lib1","SARS-CoV-2","CCAAACATACATATCA",9,95.23,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S45G N107S R124N Y159L F167P A190E",6
"lib1","SARS-CoV-2","CCAAACATGCTGATAG",5,46.86,10.26,-0.51,0.07,2.8,1,0,">1 nonsynonymous","S41L Y66C I72V T140R",4
"lib1","SARS-CoV-2","CCAAACATTAAGACTA",5,38,6,-4.76,2,3,1.15,0,">1 nonsynonymous","I72F D98L",2
"lib1","SARS-CoV-2","CCAAACATTCACATTG",3,36.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11F S45Y L122S F126W P133L G155L",6
"lib1","SARS-CoV-2","CCAAACATTGGAAGTT",1,20.09,10.89,0.12,0.12,2.89,1.06,0,">1 nonsynonymous","L60F N151K",2
"lib1","SARS-CoV-2","CCAAACCATTGTATTT",1,11.82,9.93,-0.83,0.09,2.66,1,0,">1 nonsynonymous","I104S V173M",2
"lib1","SARS-CoV-2","CCAAACCCAATAAACA",5,2.68,NA,NA,NA,NA,NA,NA,"stop","K56S T85* W106I T170R",4
"lib1","SARS-CoV-2","CCAAACCCACTATAAC",1,38.15,10.57,-0.19,0.07,2.92,1.05,0,">1 nonsynonymous","L38V I104L L122G",3
"lib1","SARS-CoV-2","CCAAACCCCTCCGTAT",2,83.64,10.67,-0.09,0.05,2.96,1,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","CCAAACCCGCATACCA",6,19.53,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95R V103P",2
"lib1","SARS-CoV-2","CCAAACCGCTGTCAGA",4,95.49,10.44,-0.33,0.06,2.87,1.01,0,">1 nonsynonymous","C61V D90M N120S",3
"lib1","SARS-CoV-2","CCAAACCGGGTATACA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","R25* V71P A89V P149L",4
"lib1","SARS-CoV-2","CCAAACCGTTTGAAAG",1,24.98,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I2D W106K P133F P149A Y175E",5
"lib1","SARS-CoV-2","CCAAACCTCTGGAGCA",2,14.19,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","N92R D98S A105R C158E",4
"lib1","SARS-CoV-2","CCAAACGAAAAGGCAA",2,1.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","CCAAACGAACAGAATT",4,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36M K87W V103D S108N N130T",5
"lib1","SARS-CoV-2","CCAAACGCAGTCACAC",5,13.81,10.27,-0.49,0.08,2.82,1,0,">1 nonsynonymous","Y39M A105M",2
"lib1","SARS-CoV-2","CCAAACGCGAAATACA",2,7.01,10.24,-0.52,0.1,2.74,1.18,0.01,">1 nonsynonymous","G9T N151I",2
"lib1","SARS-CoV-2","CCAAACGCTAAAACAA",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Q E141V",2
"lib1","SARS-CoV-2","CCAAACGGAGCAGTAA",2,50.91,7.09,-3.67,0.31,1.5,1.15,0.02,">1 nonsynonymous","F99H N120T",2
"lib1","SARS-CoV-2","CCAAACGGTGATTTTA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","W23K A42* E135W P149M H189Y",5
"lib1","SARS-CoV-2","CCAAACGTTCCCCTGC",1,29.46,6,-4.76,0.62,1.5,1.11,0.01,">1 nonsynonymous","D59R P82T K128G Y143R",4
"lib1","SARS-CoV-2","CCAAACTAACTCTCTT",4,17.72,9.78,-0.98,0.12,2.9,1,0.01,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","CCAAACTACAATCCAA",7,116.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N130S F167E",2
"lib1","SARS-CoV-2","CCAAACTATAGTGAAC",5,64.52,10.74,-0.02,0.05,2.91,1.01,0,">1 nonsynonymous","T140E F160C",2
"lib1","SARS-CoV-2","CCAAACTCACAAGTTA",2,988.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89C G101W Y123G",3
"lib1","SARS-CoV-2","CCAAACTCAGTATAAT",2,26.91,10.47,-0.29,0.06,2.89,1,0,">1 nonsynonymous","P54S N64T T100A V153E",4
"lib1","SARS-CoV-2","CCAAACTCCTATGCTT",2,48.96,9.77,-0.99,0.1,2.77,1.03,0,">1 nonsynonymous","L57S F156A",2
"lib1","SARS-CoV-2","CCAAACTCGCATCGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A42P K87* N120F",3
"lib1","SARS-CoV-2","CCAAACTTAATGCATC",1,11.01,8.15,-2.61,0.28,1.53,1.07,0.02,">1 nonsynonymous","S41W K48S D68A N107S F134L",5
"lib1","SARS-CoV-2","CCAAACTTACGAAAAT",12,134.34,8.75,-2.02,0.16,1.5,1.11,0.01,">1 nonsynonymous","G51P T100S S129D",3
"lib1","SARS-CoV-2","CCAAACTTATACGCTT",8,74.4,6,-4.76,2,3,1.18,0,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","CCAAACTTCTAAGGTG",2,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R T85R S113L P133T I142S",5
"lib1","SARS-CoV-2","CCAAACTTTCGCGATG",3,9.31,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D90T L95R",2
"lib1","SARS-CoV-2","CCAAACTTTCGGGGAT",1,31.6,10.77,0.01,0.07,2.99,1.02,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","CCAAAGAAAATTTAAC",15,129.64,10.49,-0.28,0.06,2.74,1.02,0,">1 nonsynonymous","T148P A190D",2
"lib1","SARS-CoV-2","CCAAAGAAACACACAT",1,77.76,10.41,-0.36,0.05,2.88,1.05,0,">1 nonsynonymous","G9P D90R",2
"lib1","SARS-CoV-2","CCAAAGAACAGAGCGA",5,119.8,10.82,0.06,0.05,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAAAGAAGAAAATTC",2,10.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F47N V103R S113T V173S",4
"lib1","SARS-CoV-2","CCAAAGAAGAGTTTCC",2,21.99,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I72P G83A Y123H S129M",4
"lib1","SARS-CoV-2","CCAAAGAAGCCTTATC",5,61.91,9.85,-0.92,0.2,1.87,1.29,0.01,">1 nonsynonymous","I104S L122A K128L",3
"lib1","SARS-CoV-2","CCAAAGAATATCCCCT",4,33.82,8.87,-1.89,0.11,1.61,1.12,0.01,">1 nonsynonymous","A89V P96N",2
"lib1","SARS-CoV-2","CCAAAGAATTCGCCAA",2,109.66,10.3,-0.47,0.05,2.89,1.04,0,">1 nonsynonymous","P149S V181I",2
"lib1","SARS-CoV-2","CCAAAGACAATGGTAC",12,54.96,10.34,-0.42,0.04,2.91,1.02,0,"1 nonsynonymous","G152V",1
"lib1","SARS-CoV-2","CCAAAGACACGACGGT",3,33.01,6.55,-4.21,0.26,1.5,1.07,0,"1 nonsynonymous","L95Y",1
"lib1","SARS-CoV-2","CCAAAGACAGTATACA",2,8.54,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34T G51V E135T T201E",4
"lib1","SARS-CoV-2","CCAAAGACCTACTAAC",1,10.8,6,-4.76,0.73,3,1.18,0.01,">1 nonsynonymous","V37G P82W",2
"lib1","SARS-CoV-2","CCAAAGACGAGTAATT",4,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K K87H G155S G174Q",4
"lib1","SARS-CoV-2","CCAAAGACTCAGCTCT",1,35.11,9.85,-0.91,0.1,2.24,1.07,0,">1 nonsynonymous","A89S P133V",2
"lib1","SARS-CoV-2","CCAAAGACTGGAATCT",3,62.1,9.38,-1.39,0.13,1.84,1.12,0.01,">1 nonsynonymous","A14D L60M Y121K",3
"lib1","SARS-CoV-2","CCAAAGAGTACCATAG",3,4.12,NA,NA,NA,NA,NA,NA,"stop","C31* T63H",2
"lib1","SARS-CoV-2","CCAAAGATATCTAGGT",10,0.76,NA,NA,NA,NA,NA,NA,"stop","K26L P82V L95V S129* G146E",5
"lib1","SARS-CoV-2","CCAAAGATTCTAACCT",5,25.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A T46C R78F W106A F156L P197M",6
"lib1","SARS-CoV-2","CCAAAGCAACACACTA",1,2.3,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCAAAGCAAGACCTAT",4,0.33,NA,NA,NA,NA,NA,NA,"stop","I2* G86N K128P",3
"lib1","SARS-CoV-2","CCAAAGCATAGCCCCA",5,52.53,6,-4.76,1.74,1.5,1.11,0,">1 nonsynonymous","T46I N92V P197T",3
"lib1","SARS-CoV-2","CCAAAGCATCCTTCCC",1,65.22,10.2,-0.57,0.07,2.69,1.05,0,">1 nonsynonymous","Q84N S147Y",2
"lib1","SARS-CoV-2","CCAAAGCATGACAACA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","N4C E10* N64D G86S P96S E135S",6
"lib1","SARS-CoV-2","CCAAAGCTTTCCGTAA",3,58.52,10.29,-0.48,0.09,2.59,1,0,"1 nonsynonymous","V180L",1
"lib1","SARS-CoV-2","CCAAAGGATTTGGCAT",2,18.28,6.12,-4.64,0.97,1.5,1.28,0.05,">1 nonsynonymous","Y50L G152A",2
"lib1","SARS-CoV-2","CCAAAGGCAACTAATG",3,1.17,NA,NA,NA,NA,NA,NA,"stop","T170*",1
"lib1","SARS-CoV-2","CCAAAGGCATAATAGA",2,22.28,6.06,-4.7,0.6,1.5,1.05,0.01,">1 nonsynonymous","C6K D97S G146L",3
"lib1","SARS-CoV-2","CCAAAGGCGTGAACAG",2,58.74,10.15,-0.62,0.09,2.63,1.05,0,">1 nonsynonymous","P7A T63D A105G",3
"lib1","SARS-CoV-2","CCAAAGGTCAAAATGA",3,79.69,10.72,-0.04,0.04,2.92,1.04,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","CCAAAGGTCCCATTAT",3,15.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G155V N157L",2
"lib1","SARS-CoV-2","CCAAAGGTGGACGAGT",3,49.19,10.77,0,0.08,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAAGTAAGTACAGC",3,20.13,10.58,-0.18,0.04,2.84,1.13,0,">1 nonsynonymous","A42T N58H",2
"lib1","SARS-CoV-2","CCAAAGTACTATTTTA",11,52.11,6.01,-4.76,1.05,1.5,1.21,0.02,">1 nonsynonymous","S43Y K56L P96I K114S S184L",5
"lib1","SARS-CoV-2","CCAAAGTACTTCTGGC",3,0.95,NA,NA,NA,NA,NA,NA,"stop","F44C T140L P169*",3
"lib1","SARS-CoV-2","CCAAAGTACTTTCGAA",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L N157K",2
"lib1","SARS-CoV-2","CCAAAGTATGAACCTC",3,10.5,6.73,-4.03,0.4,1.5,1.13,0.02,">1 nonsynonymous","S36E K56P Y91G",3
"lib1","SARS-CoV-2","CCAAAGTATTTTAGCT",3,22.39,9.84,-0.93,0.2,2.28,1.06,0.02,">1 nonsynonymous","Y35D S139N",2
"lib1","SARS-CoV-2","CCAAAGTCGTTTTTCA",3,49.72,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41G V77G F99W",3
"lib1","SARS-CoV-2","CCAAAGTCTAGCTACC",7,18.92,6.5,-4.27,0.49,1.5,1.12,0.03,">1 nonsynonymous","F44L Y123T K128Y L183W",4
"lib1","SARS-CoV-2","CCAAAGTTAGCTCCAC",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L D90Y A105I P161Y",4
"lib1","SARS-CoV-2","CCAAAGTTCACGAGAT",8,143.09,10.71,-0.06,0.05,2.9,1.07,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","CCAAAGTTCCCTAAGG",4,43.89,8.67,-2.1,0.13,2.41,1.02,0.01,">1 nonsynonymous","F62T D98W Y119S V173F",4
"lib1","SARS-CoV-2","CCAAAGTTTGACCTAC",2,12.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3V D90P",2
"lib1","SARS-CoV-2","CCAAATAAAAGTAACC",14,279.07,10.19,-0.58,0.04,2.91,1,0,">1 nonsynonymous","N4T Y91W",2
"lib1","SARS-CoV-2","CCAAATAAACCAAACA",3,24.65,6.19,-4.58,1.16,1.5,1.24,0.04,">1 nonsynonymous","D34V N58K P82T L95Y R124P Y178L",6
"lib1","SARS-CoV-2","CCAAATAACAATGGGT",18,7.87,NA,NA,NA,NA,NA,NA,"stop","G51S W106Q K128T Q144* Q176P",5
"lib1","SARS-CoV-2","CCAAATAACTATTAAG",1,66.84,10.5,-0.27,0.07,2.84,1.01,0,"1 nonsynonymous","P169V",1
"lib1","SARS-CoV-2","CCAAATAAGCTATCCT",3,11.98,10.71,-0.05,0.07,2.94,1.01,0,">1 nonsynonymous","L5V N64S F160V T201S",4
"lib1","SARS-CoV-2","CCAAATAAGTTTCAAA",4,2.21,NA,NA,NA,NA,NA,NA,"stop","G83I D90*",2
"lib1","SARS-CoV-2","CCAAATAATCAAATGG",1,6.33,6.64,-4.12,0.49,1.5,1.14,0.04,">1 nonsynonymous","D112Q R179S",2
"lib1","SARS-CoV-2","CCAAATAATCATATCA",7,72.82,10.73,-0.03,0.04,2.91,1.05,0,"1 nonsynonymous","N110I",1
"lib1","SARS-CoV-2","CCAAATACATCTTCCA",2,81.16,10.46,-0.3,0.04,2.95,1,0,">1 nonsynonymous","I2L F12L",2
"lib1","SARS-CoV-2","CCAAATACCATTCTCG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","W23* V153L",2
"lib1","SARS-CoV-2","CCAAATACCTAACGAT",1,96.2,10.77,0,0.05,2.9,1.03,0,">1 nonsynonymous","G83R K198M",2
"lib1","SARS-CoV-2","CCAAATAGCATAGTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","CCAAATAGGATGCAGC",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I L60N D97W T100D",4
"lib1","SARS-CoV-2","CCAAATAGGGCACAGC",2,42.82,10.58,-0.18,0.16,2.68,1.09,0.01,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","CCAAATAGGTATAGGC",8,81.81,10.7,-0.07,0.08,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAATAGTCTACACG",1,21.19,10.48,-0.28,0.09,2.84,1.14,0,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","CCAAATATAGTAAACG",6,42.26,8.45,-2.32,0.32,1.5,1.18,0.04,">1 nonsynonymous","G51K K94F",2
"lib1","SARS-CoV-2","CCAAATATTACCCGAT",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M S45M K128L T140G P149L",5
"lib1","SARS-CoV-2","CCAAATATTATCACAT",6,13.02,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","K114V G174R V182Y",3
"lib1","SARS-CoV-2","CCAAATATTCTGATCC",3,0.65,NA,NA,NA,NA,NA,NA,"stop","I28* S129Q P149F F167R",4
"lib1","SARS-CoV-2","CCAAATATTGACACAA",1,19.07,10.21,-0.55,0.09,2.89,1.04,0.01,"1 nonsynonymous","V11W",1
"lib1","SARS-CoV-2","CCAAATATTTGGTAGT",4,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q K56T P161G",3
"lib1","SARS-CoV-2","CCAAATCAAATCATAA",2,36.83,8.45,-2.32,0.14,1.93,1.18,0.01,">1 nonsynonymous","T15G Y119L N130C",3
"lib1","SARS-CoV-2","CCAAATCAAATGTACA",3,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W K48N V77S G172M",4
"lib1","SARS-CoV-2","CCAAATCATGTGTCTA",3,13.1,10.47,-0.29,0.08,2.85,1.02,0,">1 nonsynonymous","G51S R78P",2
"lib1","SARS-CoV-2","CCAAATCCCCCTAAGT",1,27.61,9.93,-0.84,0.24,2.15,1.01,0.03,"1 nonsynonymous","S113D",1
"lib1","SARS-CoV-2","CCAAATCCTAAATCCA",2,40.47,10.72,-0.05,0.06,2.9,1.07,0,">1 nonsynonymous","V37L S108A L131I",3
"lib1","SARS-CoV-2","CCAAATCGACAAATTC",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84K W106Q N120M",3
"lib1","SARS-CoV-2","CCAAATCGCACCTGAA",3,123.03,10.4,-0.36,0.04,2.88,1.03,0,"1 nonsynonymous","T15G",1
"lib1","SARS-CoV-2","CCAAATCTCACCTCAA",3,29.45,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","I80T W106P Y121C",3
"lib1","SARS-CoV-2","CCAAATCTCATAGAAG",6,98.29,10.75,-0.02,0.09,2.79,1.05,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","CCAAATCTGATGCTAC",2,28.55,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y93G I104L N110L E135W",4
"lib1","SARS-CoV-2","CCAAATCTTAAGGGAT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N F99N P197S",3
"lib1","SARS-CoV-2","CCAAATGAAAGAAGAG",4,102.08,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S43Q Y119V K132N Y175G",4
"lib1","SARS-CoV-2","CCAAATGAAATACGTG",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I K48D T85Q D137V Y165T",5
"lib1","SARS-CoV-2","CCAAATGAACCTGGAT",1,6.55,9.19,-1.57,0.38,1.5,1.21,0.07,">1 nonsynonymous","W106S G116L Q168A",3
"lib1","SARS-CoV-2","CCAAATGAACTCTTAG",9,89.38,8.82,-1.94,0.08,2.65,1.1,0,">1 nonsynonymous","I2G N120T G152L P197D",4
"lib1","SARS-CoV-2","CCAAATGACACCAAAG",4,46.63,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L57P C158Y",2
"lib1","SARS-CoV-2","CCAAATGAGCACACTT",4,52.34,9.86,-0.9,0.12,2.29,1.05,0.01,">1 nonsynonymous","T55C N130G S184K",3
"lib1","SARS-CoV-2","CCAAATGAGTACGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N N92S Y121V S129K V173S",5
"lib1","SARS-CoV-2","CCAAATGATGACTCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L60* G172K",2
"lib1","SARS-CoV-2","CCAAATGCATGTGAAT",7,235.77,10.74,-0.02,0.06,2.91,1.05,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","CCAAATGGAACCTAGT",4,0.52,NA,NA,NA,NA,NA,NA,"stop","T100K Y119* Q144A",3
"lib1","SARS-CoV-2","CCAAATGTAGTATTTA",13,2.69,NA,NA,NA,NA,NA,NA,"stop","A14E K87P I104* L131G",4
"lib1","SARS-CoV-2","CCAAATGTGGACGACC",2,38.24,9.95,-0.82,0.11,2.13,1.05,0,">1 nonsynonymous","S45L K128M",2
"lib1","SARS-CoV-2","CCAAATGTTCGACTTG",6,20.96,6.24,-4.52,0.4,2.43,1.3,0.01,">1 nonsynonymous","P54Y N64I T100D P191L S200W",5
"lib1","SARS-CoV-2","CCAAATGTTTTGCTAA",1,28.73,9.27,-1.49,0.16,1.5,1.11,0.01,">1 nonsynonymous","P7M S36T A105C",3
"lib1","SARS-CoV-2","CCAAATTCAACTACCA",11,2.91,NA,NA,NA,NA,NA,NA,"stop","L60* S147E Q176L K198R",4
"lib1","SARS-CoV-2","CCAAATTCACTTAATT",2,14.94,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","CCAAATTCCCTTTAGA",5,5.82,7.61,-3.16,0.31,1.5,1.03,0.04,">1 nonsynonymous","L5W T15R L95N V103M",4
"lib1","SARS-CoV-2","CCAAATTCCTCTTACC",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S K87L F99T",3
"lib1","SARS-CoV-2","CCAAATTCTGGCCTGG",1,7.57,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","E10N D90N Y143G N171I",4
"lib1","SARS-CoV-2","CCAAATTCTTAACATA",5,16.15,6,-4.76,2,3,1.07,0,">1 nonsynonymous","R73W V180R",2
"lib1","SARS-CoV-2","CCAAATTGAATTATAA",4,16.59,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","C6V S43L T55K K94N V182R",5
"lib1","SARS-CoV-2","CCAAATTGAATTGAGT",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C F62I G86A F167S N171A",5
"lib1","SARS-CoV-2","CCAAATTGTAATACAG",2,10.85,9.72,-1.04,0.24,2.12,1.02,0.01,">1 nonsynonymous","D59C A105G N151H",3
"lib1","SARS-CoV-2","CCAAATTTAAGTTCAA",3,132.06,8.33,-2.43,0.13,2.56,1.09,0.01,">1 nonsynonymous","A145F T170N",2
"lib1","SARS-CoV-2","CCAAATTTCGCAATCT",1,100.9,10.77,0.01,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAATTTTATACCCA",2,10.02,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P96N W106A G172A",3
"lib1","SARS-CoV-2","CCAACAAAAGAGGAAA",1,25.03,10.88,0.11,0.08,2.95,1.02,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","CCAACAACATAGATCC",3,132.77,9.94,-0.82,0.1,2.3,1.03,0,">1 nonsynonymous","Y35E F47L",2
"lib1","SARS-CoV-2","CCAACAACGCAAAAGG",6,30.12,6.4,-4.37,0.6,1.5,1.17,0.04,">1 nonsynonymous","V11A A33R Y165L",3
"lib1","SARS-CoV-2","CCAACAAGCGGCACGT",16,200.88,6.99,-3.77,0.26,1.5,1.15,0.01,">1 nonsynonymous","C31F N107A L122G K128L",4
"lib1","SARS-CoV-2","CCAACAATCTCACATC",3,8.25,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","L5C F62L G83S Y175V",4
"lib1","SARS-CoV-2","CCAACAATGTAGGTGA",3,1.31,NA,NA,NA,NA,NA,NA,"stop","C61Y T201*",2
"lib1","SARS-CoV-2","CCAACAATTGAGCATT",2,45.55,10.64,-0.12,0.07,2.93,1.05,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","CCAACACAACGCCCTA",5,75.28,10.06,-0.71,0.08,2.63,1.03,0,">1 nonsynonymous","K56P R78I D98N",3
"lib1","SARS-CoV-2","CCAACACAGACCAGCA",8,58.97,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A22Y D68L F99E G155S V180T",5
"lib1","SARS-CoV-2","CCAACACATAAAATGA",2,11.08,9.95,-0.81,0.35,1.5,1,0.08,">1 nonsynonymous","L38R F62T",2
"lib1","SARS-CoV-2","CCAACACATCATTTGA",3,52.43,10.53,-0.24,0.07,2.84,1.08,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CCAACACCCCGTCATA",3,35.45,10.84,0.08,0.1,2.95,1.08,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","CCAACACTACGCTATC",4,19.27,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S69R A81Y Y165S",3
"lib1","SARS-CoV-2","CCAACACTATCGGTTC",1,8.4,7.56,-3.2,0.36,1.5,1.03,0.04,">1 nonsynonymous","A14M D112V L122V R127S",4
"lib1","SARS-CoV-2","CCAACACTCGTCATAG",4,27.36,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","P96K N118C E141T",3
"lib1","SARS-CoV-2","CCAACAGACGCGTGGA",5,63.6,9.95,-0.81,0.1,2.4,1.09,0,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","CCAACAGACGTCACGC",3,72.79,10.71,-0.05,0.07,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAACAGATTTGCTTT",3,2,NA,NA,NA,NA,NA,NA,"stop","C61* T85V G172L",3
"lib1","SARS-CoV-2","CCAACAGCAAGTAGGT",4,28.49,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R27V G83S N92V Y159R",4
"lib1","SARS-CoV-2","CCAACAGCGCGGTCAT",18,176.3,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G9T S36Y G86V T201K",4
"lib1","SARS-CoV-2","CCAACAGGATACAAAT",1,13.08,10.82,0.06,0.08,2.88,1.09,0,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","CCAACAGGCTGTAATT",2,33.9,10.45,-0.32,0.09,2.95,1,0,">1 nonsynonymous","S43C N151F",2
"lib1","SARS-CoV-2","CCAACAGGTGGTAGAA",17,152.04,6.11,-4.65,0.69,1.5,1.16,0.01,">1 nonsynonymous","C61M G86Y",2
"lib1","SARS-CoV-2","CCAACATAGAATAAGT",5,19.91,6,-4.76,2,1.5,1.23,0.08,">1 nonsynonymous","N92V F185L",2
"lib1","SARS-CoV-2","CCAACATCAACAGGTA",1,157.67,8.85,-1.92,0.06,2.67,1.1,0,">1 nonsynonymous","N64V G117W K128S S200G",4
"lib1","SARS-CoV-2","CCAACATCCCGGCGGC",11,122.17,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V20G P82A",2
"lib1","SARS-CoV-2","CCAACATCCCTCCAAC",2,2.26,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib1","SARS-CoV-2","CCAACATGAATAAAGA",8,29.99,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T85A L95R",2
"lib1","SARS-CoV-2","CCAACATGCCTACAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","S19* V77* G146L",3
"lib1","SARS-CoV-2","CCAACCAAAAGTAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41F Q168*",2
"lib1","SARS-CoV-2","CCAACCAAACGAGAAC",1,43.68,10.74,-0.02,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAACCAAAGCTTTGA",3,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K S108V R127G",3
"lib1","SARS-CoV-2","CCAACCAAGAATAGTA",3,17.91,10.73,-0.04,0.08,2.72,1.24,0,"1 nonsynonymous","N110M",1
"lib1","SARS-CoV-2","CCAACCACACAGGGAA",3,23.92,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41L G86F",2
"lib1","SARS-CoV-2","CCAACCACAGTCACCA",4,55.1,9.44,-1.32,0.21,1.5,1,0.03,">1 nonsynonymous","K26E L131A",2
"lib1","SARS-CoV-2","CCAACCACCACCCCAA",4,35.52,9.5,-1.26,0.11,2,1.03,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CCAACCACGATGTTAT",2,17.53,6.97,-3.79,0.38,1.5,1.14,0.04,">1 nonsynonymous","T15D D98A L131N",3
"lib1","SARS-CoV-2","CCAACCAGGTAAGATG",4,25.68,6.57,-4.2,0.64,1.5,1.28,0.04,">1 nonsynonymous","A33L G86N P96T C102R G146F K198V",6
"lib1","SARS-CoV-2","CCAACCAGTAGTTGAA",1,13.91,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G74N K94S V153L",3
"lib1","SARS-CoV-2","CCAACCATACACCATT",4,74.34,10.69,-0.07,0.05,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAACCATTAAACCAA",6,70.96,6,-4.76,1.59,1.5,1.17,0.01,">1 nonsynonymous","T55Y Y121S F134D E141K G155S",5
"lib1","SARS-CoV-2","CCAACCCAAGTCAATA",6,60.38,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K56V G152W G172K",3
"lib1","SARS-CoV-2","CCAACCCATAACATAA",1,20.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96T A105L",2
"lib1","SARS-CoV-2","CCAACCCGACAATATA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L I138S",2
"lib1","SARS-CoV-2","CCAACCCGCCTAGATA",8,99.06,10.85,0.09,0.09,2.93,1.02,0,"1 nonsynonymous","A192P",1
"lib1","SARS-CoV-2","CCAACCCTGCTGGTGA",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N P54M G74F D98M D137M",5
"lib1","SARS-CoV-2","CCAACCGAAAATACAA",9,1.38,NA,NA,NA,NA,NA,NA,"stop","S45* N120R",2
"lib1","SARS-CoV-2","CCAACCGAATTCCATA",3,72.31,10.67,-0.09,0.07,2.9,1.1,0,"1 nonsynonymous","N130P",1
"lib1","SARS-CoV-2","CCAACCGCCAATTACC",1,79.8,9.43,-1.33,0.12,2.2,1.18,0.01,">1 nonsynonymous","K48C K87V T100D",3
"lib1","SARS-CoV-2","CCAACCGCTTTTGTAT",8,13.11,6,-4.76,2,2,1.17,0.01,">1 nonsynonymous","A14G P96Q V181A",3
"lib1","SARS-CoV-2","CCAACCGTCTTATATA",1,11.78,6,-4.76,1.2,1.5,1.12,0.02,">1 nonsynonymous","L5G V52C G86C",3
"lib1","SARS-CoV-2","CCAACCGTTACGGCTA",11,77.3,6.11,-4.66,0.6,1.5,1.13,0.01,">1 nonsynonymous","I2V C61S R78P G83L N92F P149F G174S",7
"lib1","SARS-CoV-2","CCAACCTAAATGAAGG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y39L Y119* N157F",3
"lib1","SARS-CoV-2","CCAACCTAAATGTCAT",2,84.24,10.72,-0.04,0.05,2.88,1.08,0,">1 nonsynonymous","L122S Q168A",2
"lib1","SARS-CoV-2","CCAACCTTTCTTGTCG",1,7.31,6,-4.76,0.63,3,1.04,0,">1 nonsynonymous","K56R G146V T170Y",3
"lib1","SARS-CoV-2","CCAACGAAAATATGAA",8,119.23,10.24,-0.52,0.04,2.92,1.05,0,">1 nonsynonymous","F62V N109K F156T",3
"lib1","SARS-CoV-2","CCAACGAAATATGTAT",9,32.97,6,-4.76,1.88,1.5,1.14,0.01,">1 nonsynonymous","C61S T85G P96W L187P",4
"lib1","SARS-CoV-2","CCAACGAAATCTTGGT",3,14.37,6,-4.76,1.25,3,1.15,0,">1 nonsynonymous","C49R D68A Y143M",3
"lib1","SARS-CoV-2","CCAACGACGCCAAATC",2,49.78,8.27,-2.49,0.12,2.89,1.03,0.01,">1 nonsynonymous","G83C N157K",2
"lib1","SARS-CoV-2","CCAACGATTGGAAAAG",3,58.53,10.72,-0.04,0.07,2.89,1.03,0,">1 nonsynonymous","K114M V173A",2
"lib1","SARS-CoV-2","CCAACGCACACCTCGT",2,2.06,NA,NA,NA,NA,NA,NA,"stop","N64T T100S Y123*",3
"lib1","SARS-CoV-2","CCAACGCAGACACCCT",7,1.1,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib1","SARS-CoV-2","CCAACGCATTAAAATT",2,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84K Q176F T201C",3
"lib1","SARS-CoV-2","CCAACGCCATAAACAA",4,58.35,9.27,-1.5,0.09,1.61,1.08,0,">1 nonsynonymous","C6G A14L Y35N",3
"lib1","SARS-CoV-2","CCAACGCCTACAATCA",2,17.64,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","I28R Y35I I72K",3
"lib1","SARS-CoV-2","CCAACGCTGCCGTCTT",1,0.42,NA,NA,NA,NA,NA,NA,"stop","T15* C49Y G74S G86Y P169Y",5
"lib1","SARS-CoV-2","CCAACGGGCTGTTATT",15,165.45,10.26,-0.5,0.04,2.82,1.06,0,">1 nonsynonymous","S41R C61R E141F",3
"lib1","SARS-CoV-2","CCAACGTGGTTCAGAT",5,5.73,NA,NA,NA,NA,NA,NA,"stop","S43A V77*",2
"lib1","SARS-CoV-2","CCAACGTTAAAAATAC",2,30.91,7.44,-3.32,0.28,1.5,1.23,0.02,">1 nonsynonymous","A67R T148R",2
"lib1","SARS-CoV-2","CCAACTAAAAGCTTTT",5,97.96,8.07,-2.69,0.16,2.38,1.1,0.01,">1 nonsynonymous","N24E L60V L125T G146K",4
"lib1","SARS-CoV-2","CCAACTAAACAAATTT",5,38.95,10.66,-0.11,0.06,2.89,1,0,"1 nonsynonymous","D59L",1
"lib1","SARS-CoV-2","CCAACTAACCAAAAAA",6,126.83,10.74,-0.02,0.06,2.91,1.05,0,"1 nonsynonymous","K198I",1
"lib1","SARS-CoV-2","CCAACTAATGAGTTCA",2,0.32,NA,NA,NA,NA,NA,NA,"stop","N24R D90* T201N",3
"lib1","SARS-CoV-2","CCAACTACACTCAGAT",1,14.66,10.78,0.01,0.11,2.99,1.02,0.01,"1 nonsynonymous","Y123K",1
"lib1","SARS-CoV-2","CCAACTACATTAAGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N N58I",2
"lib1","SARS-CoV-2","CCAACTAGAGGCACGC",1,33.41,10.76,0,0.07,2.91,1.05,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","CCAACTAGTAACGCTG",4,92.2,8.26,-2.51,0.13,2.65,1.07,0.01,">1 nonsynonymous","R16C Y175M",2
"lib1","SARS-CoV-2","CCAACTATAACTAAAG",5,1.79,NA,NA,NA,NA,NA,NA,"stop","Y39L P82K W106Y Y119* F156L",5
"lib1","SARS-CoV-2","CCAACTATAGAAACAC",4,48.35,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","L5C F70K S113W N151I",4
"lib1","SARS-CoV-2","CCAACTATCAGCACTG",3,24.84,6,-4.76,1.8,1.5,1.1,0.03,">1 nonsynonymous","L95E D112Y",2
"lib1","SARS-CoV-2","CCAACTATGCACGAAA",7,1.3,NA,NA,NA,NA,NA,NA,"stop","D59L V103Q G116A R124* S139Y",5
"lib1","SARS-CoV-2","CCAACTATTTTGTACG",9,118.39,6.25,-4.52,0.37,1.5,1.15,0.01,">1 nonsynonymous","N1Y C150S",2
"lib1","SARS-CoV-2","CCAACTCAAGAGAAAC",8,21.83,6.28,-4.49,0.83,1.5,1.06,0.04,">1 nonsynonymous","I72Y D97L G101T",3
"lib1","SARS-CoV-2","CCAACTCACGTCCTCT",2,45.31,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14N Y39K Y50L",3
"lib1","SARS-CoV-2","CCAACTCATTCGCACA",16,150.36,9.49,-1.28,0.07,2.78,1.07,0,">1 nonsynonymous","N120I E154F",2
"lib1","SARS-CoV-2","CCAACTCGGTAATGTA",5,80.37,9.65,-1.11,0.16,1.66,1.09,0.01,">1 nonsynonymous","Y50N K198S",2
"lib1","SARS-CoV-2","CCAACTCGTCTGGCCA",2,28.76,6.76,-4.01,0.56,1.5,1.11,0.04,">1 nonsynonymous","K94S L131G G166T",3
"lib1","SARS-CoV-2","CCAACTCTAGAAATTT",2,22.85,10.82,0.05,0.06,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAACTCTCAGATTCG",2,47.5,8.64,-2.12,0.11,2.34,1.17,0.01,">1 nonsynonymous","E10N D97R Q168L",3
"lib1","SARS-CoV-2","CCAACTGATTCAGAAC",10,86.4,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10A D90Y N109T S139H G172S",5
"lib1","SARS-CoV-2","CCAACTGCTCCTATGA",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83M L122E G146M P169L G174E",5
"lib1","SARS-CoV-2","CCAACTGGTACAACTA",11,76.48,10.84,0.07,0.09,2.89,1.03,0,">1 nonsynonymous","Y39R S53Q N110T Q163F",4
"lib1","SARS-CoV-2","CCAACTGTAACTCTGG",3,76.01,10.88,0.12,0.1,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAACTTACTGAATCA",5,4.59,NA,NA,NA,NA,NA,NA,"stop","C61M Y119* K132V",3
"lib1","SARS-CoV-2","CCAACTTCAAAAGGAT",6,64.5,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","A14C F44N V103R A190D",4
"lib1","SARS-CoV-2","CCAACTTGAGCAACGA",5,99.79,10.57,-0.19,0.04,2.94,1.01,0,">1 nonsynonymous","K48L A190S",2
"lib1","SARS-CoV-2","CCAACTTGGTAGCATA",1,24.03,10.55,-0.21,0.11,2.8,1.09,0.01,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","CCAACTTGTACTAGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","CCAACTTTATGCTCAT",10,240.13,9.69,-1.07,0.06,2.73,1.05,0,">1 nonsynonymous","S45W F156L",2
"lib1","SARS-CoV-2","CCAAGAAAAAATAAAC",4,104.06,10.4,-0.37,0.02,2.93,1.03,0,">1 nonsynonymous","G9L F160T",2
"lib1","SARS-CoV-2","CCAAGAAAAAGTCCCT",2,0.45,NA,NA,NA,NA,NA,NA,"stop","D59* V77W I104S D112Y P149W F167L",6
"lib1","SARS-CoV-2","CCAAGAAACAAAGACG",1,13.71,6,-4.76,0.73,1.5,1.1,0.01,">1 nonsynonymous","C6N C61D D112M E135W F156M",5
"lib1","SARS-CoV-2","CCAAGAAACTCAAGAA",2,9.85,6.67,-4.1,0.61,1.64,1.14,0.03,">1 nonsynonymous","F99C K128S C158K",3
"lib1","SARS-CoV-2","CCAAGAAAGCCATATT",9,40.45,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5V A14G V65P T85D R124S",5
"lib1","SARS-CoV-2","CCAAGAAATAAAAGAT",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S N40I T201S",3
"lib1","SARS-CoV-2","CCAAGAACAATCGACA",1,53.21,9.71,-1.06,0.2,1.73,1.08,0.02,">1 nonsynonymous","L5P E10G G51V",3
"lib1","SARS-CoV-2","CCAAGAACCTTCGATA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","C6V Y39* L60S",3
"lib1","SARS-CoV-2","CCAAGAAGAAACGCTA",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P T55L Y123V I138Y G166L",5
"lib1","SARS-CoV-2","CCAAGAAGGCAGCACG",6,128.13,10.59,-0.17,0.03,2.95,1.03,0,"1 nonsynonymous","N4C",1
"lib1","SARS-CoV-2","CCAAGAATTATTCTTT",4,120.5,10.74,-0.02,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAGACAGATTAGAC",8,78.95,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A42G Y143P K199R",3
"lib1","SARS-CoV-2","CCAAGACATATTAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I N107P D137V",3
"lib1","SARS-CoV-2","CCAAGACTGAGGGGAA",5,59.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F99S L125V",2
"lib1","SARS-CoV-2","CCAAGACTTAATCTCT",1,13.43,9.86,-0.91,0.12,2.83,1.03,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","CCAAGACTTCTATTCA",5,22.4,10.88,0.12,0.13,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAGAGAACCATACC",2,0.5,NA,NA,NA,NA,NA,NA,"stop","V11R C49M L60* A89G S139V G196A",6
"lib1","SARS-CoV-2","CCAAGAGGGTTTGTAC",4,69.62,9.83,-0.93,0.09,2.64,1.05,0,">1 nonsynonymous","C6W S147G K199H",3
"lib1","SARS-CoV-2","CCAAGAGTAGTTACGT",12,146.34,8.49,-2.27,0.14,1.5,1.14,0.01,">1 nonsynonymous","V103M E154D",2
"lib1","SARS-CoV-2","CCAAGAGTCAACCTTG",3,77.69,10.48,-0.28,0.05,2.91,1.01,0,">1 nonsynonymous","R27C L60V T100L",3
"lib1","SARS-CoV-2","CCAAGAGTGAAGATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* K48R Y93L K114P Y119R",5
"lib1","SARS-CoV-2","CCAAGATAACCCGAGT",4,33.22,9.52,-1.24,0.11,2.72,1.06,0,">1 nonsynonymous","G9L K87M Q144V",3
"lib1","SARS-CoV-2","CCAAGATATAAAATAA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","L125* T170P",2
"lib1","SARS-CoV-2","CCAAGATATAGGAGCA",5,41.66,10.62,-0.14,0.05,2.96,1,0,">1 nonsynonymous","F44H S200K",2
"lib1","SARS-CoV-2","CCAAGATCAAAAATTA",5,97.55,9.3,-1.47,0.07,2.82,1.12,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","CCAAGATCCAACAGAA",2,19.8,6.65,-4.12,0.46,1.63,1.14,0.03,">1 nonsynonymous","N92T I104S",2
"lib1","SARS-CoV-2","CCAAGATCCAGGTACG",8,38.95,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10V T55Y L95H Y123S",4
"lib1","SARS-CoV-2","CCAAGATCGTATTCTA",10,74.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S A14N C158K",3
"lib1","SARS-CoV-2","CCAAGATGAGAACCAA",3,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S I28M T85S P161M",4
"lib1","SARS-CoV-2","CCAAGATGTTCTGATG",6,90.83,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","V37S L95R Y119D N130D Q176R",5
"lib1","SARS-CoV-2","CCAAGATGTTGACAAT",5,53.51,10.05,-0.71,0.13,2.26,1.07,0.01,">1 nonsynonymous","V37Y C61F A89T T201M",4
"lib1","SARS-CoV-2","CCAAGATTAAGTCAAA",7,76.15,9.46,-1.31,0.12,2.29,1.12,0.01,">1 nonsynonymous","I104S P149N F156R",3
"lib1","SARS-CoV-2","CCAAGATTACAGGAAA",6,46.62,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y39Q K56A N107S N157T G166C T201H",6
"lib1","SARS-CoV-2","CCAAGCAAAAGACACC",10,28.74,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T15Y S69L Y91H D112Q Y123V N151K E154D",7
"lib1","SARS-CoV-2","CCAAGCAAACTACCAA",5,26.63,8.12,-2.64,0.35,1.5,1,0.05,">1 nonsynonymous","P7L A89C S108N E141T P149G V153M",6
"lib1","SARS-CoV-2","CCAAGCAACAGAATCA",5,66.7,7.38,-3.38,0.3,1.5,1.2,0.03,">1 nonsynonymous","R25G S139G",2
"lib1","SARS-CoV-2","CCAAGCAACATCAACT",2,34.12,9.38,-1.38,0.06,2.83,1.12,0,"1 nonsynonymous","G166Q",1
"lib1","SARS-CoV-2","CCAAGCAACTACTCAA",6,53.36,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D97T D112Q P149T V173M",4
"lib1","SARS-CoV-2","CCAAGCAACTCAATTA",3,43.95,8.74,-2.03,0.1,2.32,1.14,0,">1 nonsynonymous","Y66Q N118K",2
"lib1","SARS-CoV-2","CCAAGCAAGCAACATA",2,54.06,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N30L I80E V103M T201M",4
"lib1","SARS-CoV-2","CCAAGCAATCTTTATC",2,1.39,NA,NA,NA,NA,NA,NA,"stop","N64R N120* S139G G152H",4
"lib1","SARS-CoV-2","CCAAGCAATTTAACCT",9,3.6,NA,NA,NA,NA,NA,NA,"stop","D59I K94R W106* F167P",4
"lib1","SARS-CoV-2","CCAAGCACAAAAAAAA",4,20.27,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","D112W S129N",2
"lib1","SARS-CoV-2","CCAAGCACTCAATCTA",1,46.79,10.6,-0.17,0.12,2.85,1.09,0.01,">1 nonsynonymous","S19P L122Y",2
"lib1","SARS-CoV-2","CCAAGCACTGCAAATT",7,23.87,8.28,-2.49,0.15,2.58,1.1,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","CCAAGCATACAATAAA",10,143.69,10.74,-0.02,0.04,2.91,1.04,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","CCAAGCCCACGACCTA",3,42.25,10.69,-0.08,0.04,2.95,1.01,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","CCAAGCCGTCCCTCCC",11,187.54,10.36,-0.4,0.04,2.91,1.01,0,">1 nonsynonymous","D59P T201S",2
"lib1","SARS-CoV-2","CCAAGCCTATCCAACT",5,3.7,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib1","SARS-CoV-2","CCAAGCGAAAATACAT",8,95.72,10.79,0.03,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAAGCGCCGAAATGT",2,11.61,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F12L N92V",2
"lib1","SARS-CoV-2","CCAAGCGGGATGACAA",2,7.53,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","E10D V103M",2
"lib1","SARS-CoV-2","CCAAGCTAAAATTACA",2,29.28,8.83,-1.93,0.21,1.5,1.2,0.02,">1 nonsynonymous","I28V Y35V K94Y",3
"lib1","SARS-CoV-2","CCAAGCTACGGACTAC",5,128.57,8.36,-2.41,0.15,2.43,1.05,0.01,">1 nonsynonymous","S41D N58C V115K N157T",4
"lib1","SARS-CoV-2","CCAAGCTGCATTTAAG",5,75.38,10.34,-0.42,0.05,2.9,1.01,0,">1 nonsynonymous","T3Y G152T",2
"lib1","SARS-CoV-2","CCAAGGAAAACCGAAA",1,16.41,8.76,-2,0.15,1.92,1.18,0.01,">1 nonsynonymous","C61S N107V",2
"lib1","SARS-CoV-2","CCAAGGACGCGACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A89K S129R E141S Q163*",4
"lib1","SARS-CoV-2","CCAAGGAGGAACAAAC",3,8.2,7.46,-3.3,0.22,1.82,1.1,0.02,">1 nonsynonymous","K26S G51W K56V",3
"lib1","SARS-CoV-2","CCAAGGATCAAATTCA",1,51.47,10.73,-0.03,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAAGGCAACGGATCG",7,45.83,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G51N G83D A89D D97V S113T K128N",6
"lib1","SARS-CoV-2","CCAAGGCACCATAATG",4,33.43,10.42,-0.34,0.07,2.87,1.03,0,">1 nonsynonymous","S41P S129T P149L",3
"lib1","SARS-CoV-2","CCAAGGCATAAAGCAT",1,34.14,9.56,-1.21,0.11,2.01,1.04,0.01,">1 nonsynonymous","S45A E141A P161S",3
"lib1","SARS-CoV-2","CCAAGGCCGATTACAG",1,1.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","CCAAGGGATGTAAAGT",9,3.13,NA,NA,NA,NA,NA,NA,"stop","Y50C G86V P133* V173H",4
"lib1","SARS-CoV-2","CCAAGGGTTACAGTAC",11,94.4,9.15,-1.61,0.19,1.56,1.21,0.02,">1 nonsynonymous","C6L P54T F62R",3
"lib1","SARS-CoV-2","CCAAGGTCTAAAATCG",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30Y A81F",2
"lib1","SARS-CoV-2","CCAAGTAACTAAAAAC",2,35.11,6.09,-4.67,0.92,1.5,1.13,0.02,">1 nonsynonymous","L5Q F12N G86V C158S F167T",5
"lib1","SARS-CoV-2","CCAAGTAACTCCGATT",3,6.62,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","P82W P96M V173S T201V",4
"lib1","SARS-CoV-2","CCAAGTAATGCAAGGC",12,47.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N107L R127T T170F",3
"lib1","SARS-CoV-2","CCAAGTACCACTGGTT",6,56.82,10.57,-0.2,0.07,2.85,1.08,0,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","CCAAGTACTACAACAA",6,34.04,6.36,-4.41,0.75,1.5,1.3,0.03,">1 nonsynonymous","A22V P177S",2
"lib1","SARS-CoV-2","CCAAGTATAAAAACTT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","N13* D90K N107S",3
"lib1","SARS-CoV-2","CCAAGTATGATATATG",3,13.65,9.49,-1.28,0.1,2.65,1.13,0.01,">1 nonsynonymous","D75K T148L P169D",3
"lib1","SARS-CoV-2","CCAAGTATGTCTCTTA",4,125.07,10.01,-0.76,0.09,2.42,1.03,0,">1 nonsynonymous","T3W D90Y K114R",3
"lib1","SARS-CoV-2","CCAAGTCAATACAAAA",3,117.48,7.27,-3.49,0.23,1.74,1.25,0.01,"1 nonsynonymous","Y175T",1
"lib1","SARS-CoV-2","CCAAGTCAATTCAGCT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","R16* I88Q I104Y N120V L131W N171Y",6
"lib1","SARS-CoV-2","CCAAGTCATTGAGAAA",7,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D V77Q V103P E135R",4
"lib1","SARS-CoV-2","CCAAGTCCACTCGATC",1,17.68,9.51,-1.25,0.21,1.86,1,0.02,">1 nonsynonymous","F17V W23F P149N",3
"lib1","SARS-CoV-2","CCAAGTCCGTCCTTAC",2,14.29,9.9,-0.87,0.08,2.83,1.01,0,">1 nonsynonymous","C61Q G152F F160V",3
"lib1","SARS-CoV-2","CCAAGTCCTTTTTTTT",3,28.08,6,-4.76,1.41,1.5,1.13,0,">1 nonsynonymous","L38K S69V R136Y A145P L183G",5
"lib1","SARS-CoV-2","CCAAGTCGAACCGAAT",1,3.72,NA,NA,NA,NA,NA,NA,"stop","Q84* D112L L187R",3
"lib1","SARS-CoV-2","CCAAGTCGACCACAAG",8,167.56,10.17,-0.6,0.05,2.76,1.03,0,">1 nonsynonymous","L5V I28G L122M",3
"lib1","SARS-CoV-2","CCAAGTCGAGTGGTCG",5,96.68,9.92,-0.85,0.06,2.83,1.01,0,">1 nonsynonymous","K87N A105T I138N",3
"lib1","SARS-CoV-2","CCAAGTCTACTATCCG",2,60.73,10.35,-0.42,0.06,2.82,1.03,0,">1 nonsynonymous","G9Y S36T D59W E154S",4
"lib1","SARS-CoV-2","CCAAGTGAGTGAATAG",3,88.78,8.62,-2.15,0.1,2.28,1.09,0,">1 nonsynonymous","V32I A81H P169D",3
"lib1","SARS-CoV-2","CCAAGTGCTGGACAGC",4,86.55,6,-4.76,2,3,1.16,0,">1 nonsynonymous","W23L L38A N120L G172S",4
"lib1","SARS-CoV-2","CCAAGTGCTTATCACC",5,0.74,NA,NA,NA,NA,NA,NA,"stop","Y35T K48* R136P",3
"lib1","SARS-CoV-2","CCAAGTGTGCGCAAAA",3,68.21,9.29,-1.47,0.05,2.93,1.04,0,">1 nonsynonymous","R78N K87S T100Y G174W",4
"lib1","SARS-CoV-2","CCAAGTTAAGCTGGGC",7,66.96,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48L N107I C150K",3
"lib1","SARS-CoV-2","CCAAGTTTATACTGTT",6,33.73,6,-4.76,1.39,1.5,1.13,0.01,">1 nonsynonymous","D97N N107F N120Q N157V",4
"lib1","SARS-CoV-2","CCAAGTTTTGAATACT",15,182.11,10.59,-0.18,0.03,2.9,1.04,0,"1 nonsynonymous","I138Y",1
"lib1","SARS-CoV-2","CCAATAAAACCCCGGT",5,77.02,8.87,-1.89,0.17,1.5,1.06,0.01,">1 nonsynonymous","W23K I138T F156H",3
"lib1","SARS-CoV-2","CCAATAAAAGGTGTCT",9,40.93,9.3,-1.46,0.27,1.5,1.16,0.03,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","CCAATAAAATATACTC",5,80.44,10.84,0.08,0.07,2.97,1,0,"1 nonsynonymous","T55F",1
"lib1","SARS-CoV-2","CCAATAAAATGTCCTC",9,52.57,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35K C61G G146V",3
"lib1","SARS-CoV-2","CCAATAAACACACTCT",5,57.27,10.76,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAATAAACCAGATGC",6,85.23,10.83,0.07,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAATAAATATCCGAC",9,26.28,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F47G D90P L122E",3
"lib1","SARS-CoV-2","CCAATAACAATACTAA",7,71.35,10.56,-0.2,0.06,2.89,1.08,0,">1 nonsynonymous","T3C K56Q",2
"lib1","SARS-CoV-2","CCAATAACATAGTCAT",1,21.63,10.71,-0.05,0.06,2.92,1.02,0,">1 nonsynonymous","N40S G83N",2
"lib1","SARS-CoV-2","CCAATAACCATATTGC",2,16.67,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y21S D59M Q84E T170M",4
"lib1","SARS-CoV-2","CCAATAACTTCTTATA",2,60.36,10.31,-0.46,0.05,2.85,1.03,0,">1 nonsynonymous","D34C N58T",2
"lib1","SARS-CoV-2","CCAATAAGACCCCTAA",2,49.38,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A22M C150N",2
"lib1","SARS-CoV-2","CCAATAAGAGCACGAG",7,73.93,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I88K R124G G152H K199W",4
"lib1","SARS-CoV-2","CCAATAAGATGCCACT",7,147.98,10.2,-0.56,0.06,2.62,1.01,0,">1 nonsynonymous","N24Y D98T",2
"lib1","SARS-CoV-2","CCAATAAGCGAGGAGC",3,16.02,10.67,-0.1,0.05,2.9,1.08,0,">1 nonsynonymous","I2C Y66T",2
"lib1","SARS-CoV-2","CCAATAAGGATAAATG",4,16.56,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","E10Q Y91V V103R",3
"lib1","SARS-CoV-2","CCAATAAGGGACACAT",13,171.52,6.07,-4.7,0.84,1.5,1.21,0.02,">1 nonsynonymous","G51M R136I Q176W",3
"lib1","SARS-CoV-2","CCAATAAGTGGCATTT",1,17.71,6.97,-3.8,0.59,1.5,1.29,0.06,">1 nonsynonymous","A18L F185G",2
"lib1","SARS-CoV-2","CCAATAATAATAATCC",3,15.04,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T100Q Y121T R127P",3
"lib1","SARS-CoV-2","CCAATAATAATGTTTA",1,35.81,10.56,-0.21,0.05,2.84,1.11,0,">1 nonsynonymous","A14E K128H T201I",3
"lib1","SARS-CoV-2","CCAATAATACAAATAT",3,1.75,NA,NA,NA,NA,NA,NA,"stop","E10K S29R V37N S41C E135M Q144S Q176*",7
"lib1","SARS-CoV-2","CCAATAATCAAAATTA",4,58.8,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D34T G86V P96N S139K",4
"lib1","SARS-CoV-2","CCAATAATCCATAACT",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43H D112G Y119L K198M",4
"lib1","SARS-CoV-2","CCAATAATGAGCCAAC",5,50.24,10.75,-0.02,0.06,2.96,1.01,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","CCAATAATGTTTCAAG",8,69.73,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R16L Y21E L57T G155A",4
"lib1","SARS-CoV-2","CCAATAATTGCAATAG",3,28.2,10.24,-0.52,0.1,2.74,1,0,">1 nonsynonymous","N64M T85C T148N N151K",4
"lib1","SARS-CoV-2","CCAATACAATATCCGA",4,31.28,9.43,-1.33,0.33,1.72,1.13,0.05,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","CCAATACAATTCCCAG",5,0.87,NA,NA,NA,NA,NA,NA,"stop","P82Y T140G C150*",3
"lib1","SARS-CoV-2","CCAATACACTGTGCCT",1,14.23,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y50D G83T R127H",3
"lib1","SARS-CoV-2","CCAATACACTTACTGG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74L S139F",2
"lib1","SARS-CoV-2","CCAATACATAGCAGAC",1,12.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1M G9N T46V C150F V182R",5
"lib1","SARS-CoV-2","CCAATACCAATACACC",7,63.98,9.9,-0.87,0.1,1.94,1.05,0,"1 nonsynonymous","L162Q",1
"lib1","SARS-CoV-2","CCAATACCAATATAGT",6,59.06,6,-4.76,2,3,1.2,0,">1 nonsynonymous","Y35S P82R E141V V153D Q176A P197I",6
"lib1","SARS-CoV-2","CCAATACCCGTTTAAA",3,24.33,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V37M C61F P82F S184E",4
"lib1","SARS-CoV-2","CCAATACCGTCTACCG",1,8.48,10.71,-0.06,0.08,2.95,1.01,0,">1 nonsynonymous","I2N Y143H",2
"lib1","SARS-CoV-2","CCAATACCTGTCACGT",1,11.92,9.98,-0.79,0.19,2.5,1.07,0.02,">1 nonsynonymous","K128A R136I G196W",3
"lib1","SARS-CoV-2","CCAATACTAAATAAGT",2,40.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D34F S41E S139I F167I",4
"lib1","SARS-CoV-2","CCAATACTAAGAACCA",5,0.16,NA,NA,NA,NA,NA,NA,"stop","P7* V182C",2
"lib1","SARS-CoV-2","CCAATACTAGTACTCG",9,197.1,9.85,-0.91,0.08,2.39,1.05,0,">1 nonsynonymous","N24A C61G N171C T201R",4
"lib1","SARS-CoV-2","CCAATACTGTCTCATA",9,67.3,6.54,-4.23,0.29,1.5,1.15,0.01,">1 nonsynonymous","R73I P133Y",2
"lib1","SARS-CoV-2","CCAATAGAAAACCGTA",5,105.77,10.44,-0.33,0.04,2.89,1.04,0,"1 nonsynonymous","F62K",1
"lib1","SARS-CoV-2","CCAATAGAACGTGACT",6,20.63,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y35T T63Q D68L P96T R179E",5
"lib1","SARS-CoV-2","CCAATAGAACTACACG",4,103.95,10.25,-0.51,0.04,2.83,1,0,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","CCAATAGAATGCCTAA",4,1.13,NA,NA,NA,NA,NA,NA,"stop","I28A V115* L122H",3
"lib1","SARS-CoV-2","CCAATAGATAGCCGGA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","D59* Y143K C150S A192S T201Y",5
"lib1","SARS-CoV-2","CCAATAGCAGAGAACA",5,44.52,10.35,-0.41,0.09,2.72,1.05,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","CCAATAGCGAAAATAA",3,16.65,9.51,-1.26,0.23,2.01,1.04,0.02,">1 nonsynonymous","N1Y L5S G83V G174L T201H",5
"lib1","SARS-CoV-2","CCAATAGGAGCGGACT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","S41* Y121W E135F",3
"lib1","SARS-CoV-2","CCAATAGTAATGAAGT",6,17.47,6.67,-4.09,0.58,1.5,1.22,0.04,">1 nonsynonymous","L5N F12D P54H",3
"lib1","SARS-CoV-2","CCAATAGTCAATCATT",6,45.21,6.33,-4.43,0.95,1.5,1.21,0.05,">1 nonsynonymous","Y35S V103L S113Y",3
"lib1","SARS-CoV-2","CCAATAGTGAAGTATA",7,59.36,6,-4.76,1.98,1.5,1.21,0.03,">1 nonsynonymous","C61E D90P S164T",3
"lib1","SARS-CoV-2","CCAATATAAAATATCC",1,20.01,10.67,-0.09,0.09,2.95,1.02,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","CCAATATAAAGAACTA",5,111.4,10.49,-0.28,0.06,2.83,1.07,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","CCAATATAACAGAAAA",2,28.65,7.15,-3.62,0.19,1.63,1.09,0.01,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","CCAATATAACGACAAA",5,67.58,10.29,-0.47,0.05,2.81,1.01,0,">1 nonsynonymous","A22S S139L P197R",3
"lib1","SARS-CoV-2","CCAATATAACGGGATA",3,0.96,NA,NA,NA,NA,NA,NA,"stop","N30* C61K",2
"lib1","SARS-CoV-2","CCAATATAAGAGTGGA",9,166.62,10.67,-0.09,0.03,2.93,1.01,0,">1 nonsynonymous","R16V Q168W Y178A",3
"lib1","SARS-CoV-2","CCAATATAATTTACGC",4,9.61,6,-4.76,1.5,1.5,1.1,0.03,">1 nonsynonymous","D34N L60Q I80R T85G",4
"lib1","SARS-CoV-2","CCAATATAGAAACAGG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","Y35* K48S S147L F160M",4
"lib1","SARS-CoV-2","CCAATATAGAGTAAGA",2,76.75,9.07,-1.69,0.06,2.69,1.08,0,">1 nonsynonymous","E10L C61R T140C Q168M S200M",5
"lib1","SARS-CoV-2","CCAATATCACAAGTAA",6,919.37,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N13R G101S N107Q",3
"lib1","SARS-CoV-2","CCAATATCGCCTGAAG",3,15.36,7.04,-3.72,0.48,1.75,1.22,0.07,">1 nonsynonymous","P133M P161E C195F",3
"lib1","SARS-CoV-2","CCAATATCTGATAGCT",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S147F L162C",2
"lib1","SARS-CoV-2","CCAATATGAATAGGTC",1,28.49,10.72,-0.05,0.04,2.95,1.05,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","CCAATATGACATTGTA",4,70.22,7.95,-2.81,0.31,1.5,1.01,0.03,">1 nonsynonymous","F17T V115M A145I",3
"lib1","SARS-CoV-2","CCAATATGTAACAGCA",6,83.45,10.76,0,0.07,2.93,1.03,0,">1 nonsynonymous","E10D F62I",2
"lib1","SARS-CoV-2","CCAATATTCGAATCCT",8,30.6,6,-4.76,1.7,2.26,1.28,0.03,">1 nonsynonymous","C49H T170S",2
"lib1","SARS-CoV-2","CCAATATTGTGTACTT",1,8.26,6,-4.76,2,3,1.2,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","CCAATCAAAGATAACC",7,28.47,7.03,-3.74,0.31,1.5,1.14,0.02,">1 nonsynonymous","L131Q C158Y T201A",3
"lib1","SARS-CoV-2","CCAATCAATTCAGCCG",3,38.19,9.15,-1.61,0.12,1.86,1.27,0.01,">1 nonsynonymous","S43G T55Y V115F R136N",4
"lib1","SARS-CoV-2","CCAATCACGACCAAAA",7,0.6,NA,NA,NA,NA,NA,NA,"stop","L5M D112M Y119G E135* K199V",5
"lib1","SARS-CoV-2","CCAATCACTATGCAAG",1,9.83,10.62,-0.15,0.04,2.96,1.04,0,"1 nonsynonymous","F156P",1
"lib1","SARS-CoV-2","CCAATCACTTAGGGAT",6,68.52,8.86,-1.9,0.27,1.5,1,0.04,">1 nonsynonymous","F8P E135L",2
"lib1","SARS-CoV-2","CCAATCAGAACGACCA",5,41.04,10.66,-0.11,0.12,2.86,1.05,0,">1 nonsynonymous","T3W T46R L122R K198R",4
"lib1","SARS-CoV-2","CCAATCAGGACTTAGG",5,35.59,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L60A R127T E135L L188F",4
"lib1","SARS-CoV-2","CCAATCATAAAAGTTT",2,15.19,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L38V D59F C150G",3
"lib1","SARS-CoV-2","CCAATCATAATGCTCA",1,10.55,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T15K S36T Y66T V103N I138Q Y178G",6
"lib1","SARS-CoV-2","CCAATCATCAATACAT",8,113.63,9.96,-0.8,0.04,2.87,1.06,0,"1 nonsynonymous","E154W",1
"lib1","SARS-CoV-2","CCAATCCAATCTACGC",7,53.65,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","L5V A33L S139P Y143K Q176S",5
"lib1","SARS-CoV-2","CCAATCCACGCTCGAC",11,143.38,10.85,0.09,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAATCCGAATCTTTA",2,41.59,9.16,-1.6,0.12,1.79,1.13,0,">1 nonsynonymous","A89G F160I",2
"lib1","SARS-CoV-2","CCAATCCTTCCGAAAT",2,31.2,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","N4I L183K",2
"lib1","SARS-CoV-2","CCAATCGAAACCTGAT",12,59.3,9.91,-0.85,0.12,2.25,1,0,">1 nonsynonymous","P96R N110I",2
"lib1","SARS-CoV-2","CCAATCGACTAAAAAC",15,125.42,6,-4.76,1.56,1.5,1.21,0.02,">1 nonsynonymous","Y91V C102V",2
"lib1","SARS-CoV-2","CCAATCGACTTAAATT",6,1.34,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib1","SARS-CoV-2","CCAATCGATGTTTTTG",2,8.33,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","I88S C158R P191Y",3
"lib1","SARS-CoV-2","CCAATCGCAATTACTC",3,30.53,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S41W F134K F167G P197L",4
"lib1","SARS-CoV-2","CCAATCGGACATATTA",2,65.98,10.53,-0.23,0.05,2.84,1.01,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","CCAATCTAAATTCAAT",4,19.5,8.95,-1.81,0.24,1.75,1.13,0.04,">1 nonsynonymous","T55C S69I",2
"lib1","SARS-CoV-2","CCAATCTAATTACGAC",1,10.43,10.67,-0.09,0.1,2.95,1,0.01,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","CCAATCTCAAAAGCCG",7,42.7,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9A A18K G101T A105S N120S V173Y",6
"lib1","SARS-CoV-2","CCAATCTCATGACTAA",1,18.84,6.16,-4.6,1.13,1.5,1.18,0.06,">1 nonsynonymous","V37Y C61F G86M S108V G155V",5
"lib1","SARS-CoV-2","CCAATCTGCAACATTT",8,111.72,10.77,0,0.07,2.91,1.05,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","CCAATCTTACAACTAA",3,46.6,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G86L C158L P197T",3
"lib1","SARS-CoV-2","CCAATGAACCTAAAAG",3,46.89,10.14,-0.62,0.11,2.25,1.06,0,">1 nonsynonymous","I2R F99Y I138K",3
"lib1","SARS-CoV-2","CCAATGAAGATTAGTT",6,28.33,6.35,-4.42,0.59,1.5,1.16,0.02,">1 nonsynonymous","S41E V65K F99T L131Q P149S N157S P197T",7
"lib1","SARS-CoV-2","CCAATGAATACCGACA",2,40.8,9.07,-1.7,0.19,1.5,1.06,0.02,">1 nonsynonymous","N4I P133Q A145V",3
"lib1","SARS-CoV-2","CCAATGACACAACAAG",1,0.9,NA,NA,NA,NA,NA,NA,"stop","T55D P149K V181*",3
"lib1","SARS-CoV-2","CCAATGACGCAGACAA",6,61,9.15,-1.62,0.05,2.93,1.06,0,">1 nonsynonymous","S129N G166M",2
"lib1","SARS-CoV-2","CCAATGAGGAAATAAC",4,0.49,NA,NA,NA,NA,NA,NA,"stop","I28G T46K N107*",3
"lib1","SARS-CoV-2","CCAATGATAATATAAA",1,23.38,10.64,-0.12,0.07,2.9,1.04,0,">1 nonsynonymous","I2R I142Y T201M",3
"lib1","SARS-CoV-2","CCAATGATGGAACAAA",10,179.67,10.7,-0.06,0.06,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAATGATGTAAGTCT",13,202.2,10.22,-0.54,0.05,2.83,1.03,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","CCAATGATTGAGATCT",2,10.52,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","A22T F44L V103T N130Q P149I",5
"lib1","SARS-CoV-2","CCAATGATTTGTTTGA",2,21.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89F A105N",2
"lib1","SARS-CoV-2","CCAATGCAGCTGAAAA",5,58.57,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Q84Y C158P K199S",3
"lib1","SARS-CoV-2","CCAATGCATAACTTGT",1,8.65,6.2,-4.56,2,3,1.2,0.03,">1 nonsynonymous","C49G Y93N N107C G155N",4
"lib1","SARS-CoV-2","CCAATGCCCAGCTTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9A L60* A67I P96T V153L P169W",6
"lib1","SARS-CoV-2","CCAATGCCGACTGGAC",1,21.69,9.41,-1.35,0.21,1.5,1.06,0.02,">1 nonsynonymous","F62V I142L L183Y",3
"lib1","SARS-CoV-2","CCAATGCCTTACTTCT",1,21.75,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","Y50L Y119A R127A I138W",4
"lib1","SARS-CoV-2","CCAATGCTACGTAGCT",5,34.35,9.85,-0.91,0.13,2.25,1.06,0.01,">1 nonsynonymous","T15F G116S",2
"lib1","SARS-CoV-2","CCAATGGAATACGTAA",4,1,NA,NA,NA,NA,NA,NA,"stop","P7* P54K R127L",3
"lib1","SARS-CoV-2","CCAATGGAATCAACAG",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P54H V103Q N120T K128L T201S",6
"lib1","SARS-CoV-2","CCAATGGTACAGTAAG",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y93N K199G",3
"lib1","SARS-CoV-2","CCAATGTACAAACCAC",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104F N120E F126R P133S N151Q L162Q",6
"lib1","SARS-CoV-2","CCAATGTAGACTACAG",6,278.32,10.71,-0.05,0.05,2.9,1.06,0,"1 nonsynonymous","R16L",1
"lib1","SARS-CoV-2","CCAATGTAGTTTAGAC",2,30.46,10.2,-0.56,0.09,2.71,1.08,0,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","CCAATGTCAAGTATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D34L S41D K56F F99* P177W L183R",6
"lib1","SARS-CoV-2","CCAATGTCACGATAGA",1,11.57,6.4,-4.36,0.28,3,1.09,0.01,">1 nonsynonymous","F12L R136V A145F",3
"lib1","SARS-CoV-2","CCAATGTCCAAATTTG",3,53.59,10.62,-0.14,0.05,2.9,1.07,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","CCAATGTCCATCACTT",11,1.89,NA,NA,NA,NA,NA,NA,"stop","Y66L N92*",2
"lib1","SARS-CoV-2","CCAATGTCCCGCTGCA",1,14.49,8.6,-2.17,0.22,2.83,1.21,0.03,">1 nonsynonymous","P54H G166D",2
"lib1","SARS-CoV-2","CCAATGTGCTTCAGTG",6,69.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10L F62K S113Y K198V",4
"lib1","SARS-CoV-2","CCAATGTTGAATATGA",2,14.54,9.58,-1.18,0.1,2.86,1.01,0,">1 nonsynonymous","C61G T170K",2
"lib1","SARS-CoV-2","CCAATTAAAACAAACG",6,62.75,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9K G101C S129T",3
"lib1","SARS-CoV-2","CCAATTAATCTTACGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L122* C158L G174V",3
"lib1","SARS-CoV-2","CCAATTACACTTAACC",1,41.49,10.31,-0.45,0.05,2.87,1,0,">1 nonsynonymous","G155L T201Y",2
"lib1","SARS-CoV-2","CCAATTACTTCAATCT",4,26.44,10.53,-0.24,0.09,2.93,1,0,">1 nonsynonymous","N4L Q163L",2
"lib1","SARS-CoV-2","CCAATTAGACTTATAT",2,31.31,10.72,-0.04,0.06,2.93,1.04,0,"1 nonsynonymous","E135T",1
"lib1","SARS-CoV-2","CCAATTAGCAAATGAC",1,48.87,10.53,-0.24,0.07,2.91,1.06,0,">1 nonsynonymous","C61V F185L",2
"lib1","SARS-CoV-2","CCAATTAGCTTGATAG",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M A42V F99S",3
"lib1","SARS-CoV-2","CCAATTAGGAATCCAC",2,30.12,10.8,0.03,0.06,2.82,1.12,0,">1 nonsynonymous","S29H I72V V77L",3
"lib1","SARS-CoV-2","CCAATTAGTTAGGCCC",3,14.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G86E D98C V103T I138T V153M Y159R",6
"lib1","SARS-CoV-2","CCAATTATAACCAAAA",3,43.41,9.87,-0.9,0.1,1.98,1.05,0,">1 nonsynonymous","V37W V65E",2
"lib1","SARS-CoV-2","CCAATTATATTCATAA",4,88.21,10.58,-0.18,0.03,2.91,1.03,0,">1 nonsynonymous","N64A D98W",2
"lib1","SARS-CoV-2","CCAATTATGGGCGACA",3,23.6,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E135R V182K",2
"lib1","SARS-CoV-2","CCAATTATTGTAAGCG",2,24.65,10.03,-0.73,0.12,2.68,1.03,0.01,">1 nonsynonymous","C6A V37S T63L",3
"lib1","SARS-CoV-2","CCAATTATTTTTAAAC",4,16.12,7.59,-3.18,0.5,1.5,1.23,0.07,">1 nonsynonymous","P82R D97S",2
"lib1","SARS-CoV-2","CCAATTCAAAACTCAA",2,8.83,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","T15N F70V R179W",3
"lib1","SARS-CoV-2","CCAATTCAATGAAAAA",2,16.39,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","F17L Y121S F134N I142D",4
"lib1","SARS-CoV-2","CCAATTCAGAGTATAC",1,6.73,8.57,-2.19,0.09,2.89,1.07,0,">1 nonsynonymous","N107E G174R",2
"lib1","SARS-CoV-2","CCAATTCATACGGGTA",5,4.03,NA,NA,NA,NA,NA,NA,"stop","G9R R27G D59* N171P",4
"lib1","SARS-CoV-2","CCAATTCATATATAAA",3,100.57,9.95,-0.82,0.07,2.83,1.02,0,">1 nonsynonymous","C61P I142Q L188R",3
"lib1","SARS-CoV-2","CCAATTCATCAACTAA",1,11.38,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","Y35S G51S F167T",3
"lib1","SARS-CoV-2","CCAATTCCGAACTATA",3,14.41,10.29,-0.48,0.1,1.99,1.01,0.01,">1 nonsynonymous","V52T N64H D90V",3
"lib1","SARS-CoV-2","CCAATTCCGCCAGCGA",5,64.78,8.76,-2,0.23,1.52,1.21,0.03,">1 nonsynonymous","N24T T46S K56L A89T P133S",5
"lib1","SARS-CoV-2","CCAATTCTCGACTCCT",1,14.08,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","E10C T100E W106S Y121F R179D",5
"lib1","SARS-CoV-2","CCAATTCTTGGTTACG",1,10.62,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6S N40H V182L",3
"lib1","SARS-CoV-2","CCAATTGAACGGGTGC",3,9.1,6.64,-4.12,0.35,3,1.13,0.01,">1 nonsynonymous","L5S G51C Q84L D98V",4
"lib1","SARS-CoV-2","CCAATTGAACGTGCTG",4,12.56,10.88,0.12,0.11,2.96,1,0,">1 nonsynonymous","Q163V T170L",2
"lib1","SARS-CoV-2","CCAATTGAAGAAAACT",3,30.14,10.76,0,0.09,2.86,1.07,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","CCAATTGAGACTGTAA",2,42.05,10.49,-0.28,0.06,2.74,1.06,0,">1 nonsynonymous","D98F K132N",2
"lib1","SARS-CoV-2","CCAATTGATTTAACCA",6,65.86,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D34G G51S R124G S184P",4
"lib1","SARS-CoV-2","CCAATTGGAATCCTAC",7,4.76,NA,NA,NA,NA,NA,NA,"stop","T3H Y39W V103* R127S",4
"lib1","SARS-CoV-2","CCAATTGGGACCCCAA",5,47.42,6,-4.76,1.92,1.5,1.24,0.03,"1 nonsynonymous","I80T",1
"lib1","SARS-CoV-2","CCAATTGTCAAACGAA",3,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103P Y143Q F160D K198M",4
"lib1","SARS-CoV-2","CCAATTGTTCCTGCCA",6,77.69,10.74,-0.03,0.05,2.88,1.07,0,">1 nonsynonymous","V37I K114Q",2
"lib1","SARS-CoV-2","CCAATTTAACTGCAAC",3,12.65,10.79,0.03,0.1,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAATTTACGATATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1K K56* G117A",3
"lib1","SARS-CoV-2","CCAATTTCACATAAGT",4,20.41,9.34,-1.42,0.26,1.5,1.09,0.03,">1 nonsynonymous","S45K G51A G116P",3
"lib1","SARS-CoV-2","CCAATTTCCCATAACA",6,95.02,10.82,0.05,0.1,2.89,1.04,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","CCAATTTGAACAGACA",2,28.44,10.95,0.19,0.08,2.98,1,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","CCAATTTTAAATTTGT",1,0.41,NA,NA,NA,NA,NA,NA,"stop","E10* L38G T100R N151W",4
"lib1","SARS-CoV-2","CCAATTTTATGCAACG",5,64.39,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A22F S41Q G117P R136S Q176H",5
"lib1","SARS-CoV-2","CCAATTTTCCGCTCAA",3,0.99,NA,NA,NA,NA,NA,NA,"stop","F12I T85* F99L W106Q Y143E",5
"lib1","SARS-CoV-2","CCAATTTTGACATCAG",3,22.8,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F99M C102A",2
"lib1","SARS-CoV-2","CCAATTTTTAAAAGCA",10,138.61,10.75,-0.01,0.06,2.89,1.06,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CCAATTTTTTTAAAAT",2,35.82,9.49,-1.28,0.05,2.82,1.11,0,"1 nonsynonymous","F126C",1
"lib1","SARS-CoV-2","CCACAAAAAGCCTAAA",1,9.59,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","D97Y F167S G196L",3
"lib1","SARS-CoV-2","CCACAAAACCAAGGCA",5,57.36,6,-4.76,2,1.83,1.07,0,">1 nonsynonymous","N4Y Y121G C150D C158S A190E T201M",6
"lib1","SARS-CoV-2","CCACAAAACGTAGAAT",1,13.06,9.81,-0.95,0.18,2.9,1.05,0.01,">1 nonsynonymous","D75K K87M K128F",3
"lib1","SARS-CoV-2","CCACAAAACGTTTGTC",4,18.02,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","E10I F99S",2
"lib1","SARS-CoV-2","CCACAAAATTTTAACT",5,17.34,9.1,-1.66,0.27,1.68,1.25,0.04,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","CCACAAACATGGTGCC",15,160.65,6.38,-4.38,0.32,1.5,1.15,0.01,">1 nonsynonymous","T63A I88T W106T V115Y S184I",5
"lib1","SARS-CoV-2","CCACAAACCAGACCGC",2,46.89,10.86,0.1,0.08,2.93,1.05,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","CCACAAACCCTGCTTC",2,87.51,10.23,-0.54,0.06,2.86,1.04,0,"1 nonsynonymous","Q79S",1
"lib1","SARS-CoV-2","CCACAAAGAAATACCA",4,39.36,8.86,-1.91,0.23,1.97,1.19,0.03,">1 nonsynonymous","T55P C61M D112E",3
"lib1","SARS-CoV-2","CCACAAAGAGCCGATA",4,40.09,6,-4.76,1.8,1.5,1.13,0.02,">1 nonsynonymous","W23S S53F N120L",3
"lib1","SARS-CoV-2","CCACAAAGGCCACGAC",4,0.06,NA,NA,NA,NA,NA,NA,"stop","L122* F156W T193Y V194G",4
"lib1","SARS-CoV-2","CCACAAATCCCTCAAA",2,36.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A81E G101C",2
"lib1","SARS-CoV-2","CCACAAATTTAGTAAT",14,96.83,9.41,-1.35,0.1,2.08,1.13,0,">1 nonsynonymous","G86N T201I",2
"lib1","SARS-CoV-2","CCACAAATTTCCCCTT",2,34.41,10.67,-0.1,0.1,2.85,1.07,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","CCACAACAACCCTAAC",2,29.66,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N40H A89K D112A",3
"lib1","SARS-CoV-2","CCACAACACAGGACCA",10,80.55,10.71,-0.05,0.06,2.86,1.04,0,">1 nonsynonymous","V77L P149L",2
"lib1","SARS-CoV-2","CCACAACATAATAATT",5,93.53,9.76,-1,0.12,1.83,1.12,0,">1 nonsynonymous","F62R R136K Q144R",3
"lib1","SARS-CoV-2","CCACAACCATGTTGCC",3,20.05,8.75,-2.02,0.11,2.79,1.14,0,">1 nonsynonymous","S41R T100S Y119S",3
"lib1","SARS-CoV-2","CCACAACGAAATATGG",2,24.25,7.37,-3.39,0.34,1.5,1.1,0.03,">1 nonsynonymous","L5Y D34S E135P",3
"lib1","SARS-CoV-2","CCACAACGAAGGATGG",6,215.61,8.81,-1.96,0.06,2.73,1.06,0,">1 nonsynonymous","W106S L125S F156W",3
"lib1","SARS-CoV-2","CCACAACGATGATAAA",5,144.37,10.7,-0.06,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACAACGCAAATTAA",2,11.93,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","V11W A105N P161W K198M",4
"lib1","SARS-CoV-2","CCACAACTTAATACAG",5,62.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S N107C",2
"lib1","SARS-CoV-2","CCACAAGAAAGAATAC",3,60.46,10.75,-0.01,0.1,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACAAGAATTCCGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V103T L131R H189N T201*",4
"lib1","SARS-CoV-2","CCACAAGATACTATAA",6,84.64,8.06,-2.7,0.15,1.54,1.16,0.01,">1 nonsynonymous","L5T V115S Y165S T201G",4
"lib1","SARS-CoV-2","CCACAAGTACTAGAAA",1,30.57,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L162G V173S",2
"lib1","SARS-CoV-2","CCACAAGTGAAACATG",2,67.41,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","G172H",1
"lib1","SARS-CoV-2","CCACAATAAAAATATA",3,17.17,6.53,-4.24,0.33,1.5,1.09,0.01,">1 nonsynonymous","I2S L95R A105I N157A",4
"lib1","SARS-CoV-2","CCACAATAAATAACCG",2,33.99,10.88,0.11,0.08,2.91,1.07,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","CCACAATAAATAGAAG",5,4.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","CCACAATACTGCAACA",2,43.59,10.8,0.04,0.07,2.93,1.04,0,">1 nonsynonymous","V37M D98S",2
"lib1","SARS-CoV-2","CCACAATCGCATATGA",1,7.52,6.48,-4.28,0.65,1.5,1.08,0.01,">1 nonsynonymous","G86Y L111F P133G Y143N",4
"lib1","SARS-CoV-2","CCACAATCTATATTAA",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S41C F167K",3
"lib1","SARS-CoV-2","CCACAATGCTTAGACA",5,113.84,9.91,-0.86,0.04,2.8,1.02,0,">1 nonsynonymous","Y91I N171S",2
"lib1","SARS-CoV-2","CCACAATGGTCTGGGC",2,14.62,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A14Q W23A C61A G74M T85A F126R P133C P161S T201S",9
"lib1","SARS-CoV-2","CCACAATGTAATACAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S53A",1
"lib1","SARS-CoV-2","CCACAATTACACAGGG",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A33Q A192L",3
"lib1","SARS-CoV-2","CCACAATTTAACTACG",8,3.5,NA,NA,NA,NA,NA,NA,"stop","L5V G51Y V103I Y175* Y178L",5
"lib1","SARS-CoV-2","CCACACAAAGGTAGGC",2,1.82,NA,NA,NA,NA,NA,NA,"stop","S43L L131*",2
"lib1","SARS-CoV-2","CCACACAAATGTTATG",1,2.27,NA,NA,NA,NA,NA,NA,"stop","I80* Y123I",2
"lib1","SARS-CoV-2","CCACACAAATTCCACA",1,10.19,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F12L S41C F99E",3
"lib1","SARS-CoV-2","CCACACAATAATCCAA",1,17.45,9.58,-1.18,0.2,2.23,1.04,0.02,"1 nonsynonymous","V11N",1
"lib1","SARS-CoV-2","CCACACAATGCATAGG",2,1.81,NA,NA,NA,NA,NA,NA,"stop","A42S A105* R124T",3
"lib1","SARS-CoV-2","CCACACAATTCAGTGT",7,98.98,10.45,-0.31,0.04,2.91,1.02,0,">1 nonsynonymous","T55M D90F K198G",3
"lib1","SARS-CoV-2","CCACACAATTGTTGTT",1,9.66,10.43,-0.34,0.08,2.87,1.01,0,"1 nonsynonymous","R27G",1
"lib1","SARS-CoV-2","CCACACACATAACAAG",3,1.36,NA,NA,NA,NA,NA,NA,"stop","L131* S164Y",2
"lib1","SARS-CoV-2","CCACACAGAGAACTTG",1,9.38,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I2P V20T C158S",3
"lib1","SARS-CoV-2","CCACACAGCTTTATTT",8,11.26,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","K48H G86W K94Y F99Y I104W S164D",6
"lib1","SARS-CoV-2","CCACACAGTGATAAGG",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L G83Y",2
"lib1","SARS-CoV-2","CCACACATGAGTCCAA",2,42.9,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","D34C L60I F70L",3
"lib1","SARS-CoV-2","CCACACCAAGCGGCCA",1,54.39,9.99,-0.77,0.12,2.29,1.01,0.01,">1 nonsynonymous","T15F V20P F62I",3
"lib1","SARS-CoV-2","CCACACCATTTCCCGA",9,78.22,10.7,-0.07,0.05,2.91,1.05,0,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","CCACACCCAAAATCAA",3,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R A42C P82L F134I S139R",5
"lib1","SARS-CoV-2","CCACACCCACAAAACG",5,0.95,NA,NA,NA,NA,NA,NA,"stop","D34L K48P G86V Y91* N118Y G174D",6
"lib1","SARS-CoV-2","CCACACCCCCGGTTGA",2,30.02,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G9R R25L R73I D97V",4
"lib1","SARS-CoV-2","CCACACCCCTCCGTAA",3,33.22,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T15M Y39L G86T D98G N118F R124N T140L N171H",8
"lib1","SARS-CoV-2","CCACACCCGAAATTAA",3,56.45,7.65,-3.11,0.16,2.26,1.17,0.01,"1 nonsynonymous","C158A",1
"lib1","SARS-CoV-2","CCACACGAAAAGGACT",1,16.27,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","W23S Y35R C158R",3
"lib1","SARS-CoV-2","CCACACGATATGCCAG",2,9.86,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","F8S W23L Q176L L187Y",4
"lib1","SARS-CoV-2","CCACACGATGCCTCCC",2,0.08,NA,NA,NA,NA,NA,NA,"stop","I2S N92*",2
"lib1","SARS-CoV-2","CCACACGCAATCTTAA",5,25.14,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C6V A18M I28K",3
"lib1","SARS-CoV-2","CCACACGCGAAGCTGA",1,24.17,10.83,0.07,0.07,2.84,1.14,0,"1 nonsynonymous","L188R",1
"lib1","SARS-CoV-2","CCACACGCGTTAATGT",3,16.16,10.64,-0.12,0.13,2.85,1.12,0.01,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","CCACACGGCCTACCAA",7,145.9,10.55,-0.21,0.04,2.91,1.02,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","CCACACGGGACCCAAT",6,98.88,10.12,-0.64,0.06,2.72,1.02,0,">1 nonsynonymous","A14V G152S",2
"lib1","SARS-CoV-2","CCACACGTAAGTCCAT",3,75.4,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A145I C150K T170L",3
"lib1","SARS-CoV-2","CCACACGTAGCCTGAG",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T Y50R Y66L I80S",4
"lib1","SARS-CoV-2","CCACACGTATATTCAA",5,58.86,7.95,-2.81,0.23,1.5,1.07,0.02,">1 nonsynonymous","F17G A22G T148I P169H",4
"lib1","SARS-CoV-2","CCACACTAAAACATTT",1,17.12,9.07,-1.7,0.37,1.66,1.29,0.08,">1 nonsynonymous","F8S N40F Q163S",3
"lib1","SARS-CoV-2","CCACACTAAAATGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L G83* L125T",3
"lib1","SARS-CoV-2","CCACACTAGATCGATA",5,38.97,10.67,-0.1,0.05,2.84,1.09,0,"1 nonsynonymous","N64F",1
"lib1","SARS-CoV-2","CCACACTCGACAAGAA",6,112.79,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19F P82T F134I K198M",4
"lib1","SARS-CoV-2","CCACACTGAAAGATAT",5,76.4,10.38,-0.39,0.09,2.6,1,0,">1 nonsynonymous","D97L W106L N130K",3
"lib1","SARS-CoV-2","CCACACTGACTAAATT",7,2.22,NA,NA,NA,NA,NA,NA,"stop","A18K F62* T100N L125T",4
"lib1","SARS-CoV-2","CCACACTTAAAGACAT",3,29.64,10.31,-0.46,0.08,2.84,1.07,0,">1 nonsynonymous","D90C D98L P197V",3
"lib1","SARS-CoV-2","CCACACTTAGAGCTTG",3,24.08,9.64,-1.12,0.05,2.99,1.03,0,">1 nonsynonymous","T170R T201S",2
"lib1","SARS-CoV-2","CCACACTTCCAAATAA",9,177.74,10.78,0.01,0.07,2.88,1.06,0,"1 nonsynonymous","R136Q",1
"lib1","SARS-CoV-2","CCACACTTCCTAACCC",4,65.02,9.74,-1.03,0.16,1.86,1.06,0.01,">1 nonsynonymous","I2A D68M",2
"lib1","SARS-CoV-2","CCACACTTGAATTTAA",9,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86W D90S K114R N157H T201S",5
"lib1","SARS-CoV-2","CCACAGAAACCTAATA",1,17.18,9.85,-0.91,0.15,1.91,1.13,0.02,">1 nonsynonymous","C6V P96S",2
"lib1","SARS-CoV-2","CCACAGACCATCTCGC",2,22.08,6.44,-4.32,0.34,1.5,1.21,0.01,">1 nonsynonymous","A14L A105L G146P N151T P161K",5
"lib1","SARS-CoV-2","CCACAGACGGAAACTG",8,101.67,10.69,-0.07,0.09,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACAGAGTTCACACT",3,115,10.73,-0.03,0.05,2.93,1.01,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","CCACAGATGCAGCAAA",8,77.62,8.14,-2.63,0.32,1.5,1,0.04,">1 nonsynonymous","I2M R124S",2
"lib1","SARS-CoV-2","CCACAGCACTGTAAAA",4,55.59,10.16,-0.61,0.13,2.7,1,0.01,">1 nonsynonymous","F62L A81V",2
"lib1","SARS-CoV-2","CCACAGCCTATACATA",1,10.47,6,-4.76,1.74,3,1.12,0.01,">1 nonsynonymous","S129M I142S N157R",3
"lib1","SARS-CoV-2","CCACAGCGCTCAGCGA",6,52.25,10.62,-0.14,0.08,2.87,1.08,0,">1 nonsynonymous","K132G T148S",2
"lib1","SARS-CoV-2","CCACAGGACACTTCGC",1,8.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50T D98R Y119N",3
"lib1","SARS-CoV-2","CCACAGGGTGCCAAAG",2,62.31,10.25,-0.52,0.08,2.55,1.02,0,">1 nonsynonymous","T15I K132I",2
"lib1","SARS-CoV-2","CCACAGGGTGTGGGGT",2,24.47,9.91,-0.85,0.04,2.89,1.03,0,">1 nonsynonymous","F44I T85L",2
"lib1","SARS-CoV-2","CCACAGGGTTATAAAG",10,109.41,10.1,-0.66,0.09,2.37,1.02,0,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","CCACAGGTACATTCGA",8,96.29,7.75,-3.01,0.26,1.5,1.14,0.02,">1 nonsynonymous","I2Y L38K S139V",3
"lib1","SARS-CoV-2","CCACAGGTTCCTATTG",3,41.93,9.79,-0.97,0.1,2.17,1.02,0,">1 nonsynonymous","F62L T100G",2
"lib1","SARS-CoV-2","CCACAGTAAATAAACG",4,26.08,8.38,-2.38,0.28,1.5,1.05,0.03,">1 nonsynonymous","S41Y K94E F160Q",3
"lib1","SARS-CoV-2","CCACAGTAATTCCGTG",1,37.21,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N107F G117S",2
"lib1","SARS-CoV-2","CCACAGTAGAAAGGAT",1,12.15,9.04,-1.72,0.18,2.61,1.14,0.01,">1 nonsynonymous","T3A C61H I142S",3
"lib1","SARS-CoV-2","CCACAGTATTTACATA",8,85.12,10.69,-0.07,0.04,2.88,1.07,0,"1 nonsynonymous","D98H",1
"lib1","SARS-CoV-2","CCACAGTGGTTCGACT",2,33.46,10.53,-0.24,0.08,2.9,1.05,0,">1 nonsynonymous","N130K G174D",2
"lib1","SARS-CoV-2","CCACATAACAATCGTT",5,12.83,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14W Y21S E76S D97S",4
"lib1","SARS-CoV-2","CCACATAATACCATTA",4,0.84,NA,NA,NA,NA,NA,NA,"stop","T55* I142R",2
"lib1","SARS-CoV-2","CCACATAATATAAGAT",5,51.55,8.9,-1.87,0.23,1.54,1.17,0.02,">1 nonsynonymous","L5V V37W W106I G152C Y178F",5
"lib1","SARS-CoV-2","CCACATAATTTTTAAG",3,16.74,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","D34R Y91R N130D Q163P",4
"lib1","SARS-CoV-2","CCACATACGATAGGTC",7,72.48,8.61,-2.15,0.12,2.88,1.06,0.01,">1 nonsynonymous","F8I K87T N120P",3
"lib1","SARS-CoV-2","CCACATATGCGAATTT",2,14.65,11.01,0.24,0.1,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACATATTTCATGAC",2,8.3,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8L A14P N40C V115L Y119H T140Y V153W R179Q",8
"lib1","SARS-CoV-2","CCACATCACATCCGCG",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85E D90P D98G",3
"lib1","SARS-CoV-2","CCACATCGCCTGGACT",7,83.41,6,-4.76,0.84,1.74,1.14,0.01,">1 nonsynonymous","Y119E R136C P161Q",3
"lib1","SARS-CoV-2","CCACATCTAGATGAAA",8,33.95,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I28R C49L A81P T170Q",4
"lib1","SARS-CoV-2","CCACATCTAGTAGCAC",8,49.22,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V77K Y93M",2
"lib1","SARS-CoV-2","CCACATCTTGATAATG",1,7.2,7.93,-2.83,0.34,2.3,1.04,0.02,">1 nonsynonymous","V37M N157C Y175F",3
"lib1","SARS-CoV-2","CCACATGAAAAAAGTC",3,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40H G117A C150N",3
"lib1","SARS-CoV-2","CCACATGAAAAATATT",6,52.61,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G155I G172A",2
"lib1","SARS-CoV-2","CCACATGAATCTATAG",1,11.13,10.71,-0.05,0.13,2.92,1.04,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","CCACATGAGGACTACA",1,88.96,7.99,-2.77,0.18,2.1,1.18,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","CCACATGCAATATACA",2,27.65,10.7,-0.06,0.08,2.81,1.14,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","CCACATGTGCACAACT",4,65.8,9.46,-1.31,0.09,1.89,1.13,0,">1 nonsynonymous","N4C D90N D98M N107P",4
"lib1","SARS-CoV-2","CCACATTAATGCTGCT",11,56.29,6,-4.76,0.96,1.5,1.18,0.01,">1 nonsynonymous","L95G F99L S113L N157F",4
"lib1","SARS-CoV-2","CCACATTAGAAAACTT",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R T63I D68T D90G F134D",5
"lib1","SARS-CoV-2","CCACATTATAAACAAA",2,33.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28E K48L F62S Y119G S184L",5
"lib1","SARS-CoV-2","CCACATTCGGACTCCA",5,34.21,8.26,-2.51,0.29,1.5,1,0.04,">1 nonsynonymous","S19L K128S P149K A192Y",4
"lib1","SARS-CoV-2","CCACATTTAAAAACAC",4,44.18,10.84,0.07,0.11,2.93,1.02,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","CCACCAAAAATCTTTG",1,41.95,8.2,-2.56,0.15,2.68,1.07,0.01,">1 nonsynonymous","R73E G174Q",2
"lib1","SARS-CoV-2","CCACCAAAACATCTTG",3,39.92,10.76,0,0.09,2.85,1.12,0,">1 nonsynonymous","L5P E141R",2
"lib1","SARS-CoV-2","CCACCAAAATTCAATT",1,46.98,6.49,-4.27,0.32,1.5,1.22,0.01,">1 nonsynonymous","D90T R136K Y178R",3
"lib1","SARS-CoV-2","CCACCAAAGGGTACAT",2,29.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K48Y Y66M K114T P169M P177N",5
"lib1","SARS-CoV-2","CCACCAAATGATCCCG",6,41,10.33,-0.44,0.09,2.66,1.01,0,"1 nonsynonymous","P133F",1
"lib1","SARS-CoV-2","CCACCAACCATGAGCT",4,22.68,6,-4.76,1.71,1.5,1.16,0.03,">1 nonsynonymous","C6L V71S V103M",3
"lib1","SARS-CoV-2","CCACCAACTAGGTTAG",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R D90L G172K",3
"lib1","SARS-CoV-2","CCACCAAGACGCTGTA",3,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K A33F V52D C61T E141A P149Y L183R",7
"lib1","SARS-CoV-2","CCACCAAGTCCAGAAC",4,23.01,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","D68V D90F",2
"lib1","SARS-CoV-2","CCACCAATAAAAAACG",1,24.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G155C F167N",2
"lib1","SARS-CoV-2","CCACCAATAGGTATAG",4,26.25,6,-4.76,2,3,1.25,0.01,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","CCACCAATCTTTACAA",2,19.34,9.74,-1.03,0.18,1.87,1.1,0.02,">1 nonsynonymous","L57V I104Y E186Y",3
"lib1","SARS-CoV-2","CCACCAATGATAAGTT",3,17.34,6,-4.76,2,3,1.11,0,">1 nonsynonymous","P7Y Y35K S45M Y93E",4
"lib1","SARS-CoV-2","CCACCACAAATCCACT",2,63.11,9.5,-1.27,0.16,1.76,1.11,0.01,">1 nonsynonymous","L38Q L57M",2
"lib1","SARS-CoV-2","CCACCACAACCTTGCT",2,55.39,10.74,-0.02,0.06,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CCACCACAACGCCCGC",9,41.99,6.61,-4.16,0.42,1.5,1.23,0.02,">1 nonsynonymous","L5R L95H",2
"lib1","SARS-CoV-2","CCACCACAAGCATATT",5,153.58,10.44,-0.32,0.03,2.88,1.05,0,">1 nonsynonymous","P7M D97N",2
"lib1","SARS-CoV-2","CCACCACACGCGAACG",2,64.38,6.25,-4.52,0.45,1.5,1.11,0.01,">1 nonsynonymous","V11S S129I G146A Y175D",4
"lib1","SARS-CoV-2","CCACCACCTTACACGT",9,0.96,NA,NA,NA,NA,NA,NA,"stop","C61I L122R K198* T201C",4
"lib1","SARS-CoV-2","CCACCACCTTAGAACT",4,9.07,6.3,-4.46,0.85,1.5,1.06,0.05,">1 nonsynonymous","S45R I72Y D90I V103M G155L",5
"lib1","SARS-CoV-2","CCACCACTATACAATT",8,3.13,NA,NA,NA,NA,NA,NA,"stop","Y35* Y91V E141G E186I",4
"lib1","SARS-CoV-2","CCACCACTATGACACG",4,53.14,9.52,-1.25,0.1,2.67,1.1,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","CCACCACTTCGCACAC",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I Y66N E186D",3
"lib1","SARS-CoV-2","CCACCAGAAAATAATA",5,48.14,10.62,-0.15,0.06,2.9,1.04,0,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","CCACCAGAGTCGAGCA",2,23.69,8.66,-2.11,0.16,2.45,1.01,0.01,">1 nonsynonymous","G9Q F126W R136Y",3
"lib1","SARS-CoV-2","CCACCAGCAGGGAACC",2,29.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W23S Y35L K87L Y123T G166N",5
"lib1","SARS-CoV-2","CCACCAGCTATGGCAA",4,77.09,10.43,-0.34,0.05,2.87,1.04,0,">1 nonsynonymous","S43E P191W T201D",3
"lib1","SARS-CoV-2","CCACCAGGAGGCTTAA",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G S41P Y91N T100N Y119G",5
"lib1","SARS-CoV-2","CCACCAGGCAAATCGT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","A22M I142M Q163*",3
"lib1","SARS-CoV-2","CCACCAGGCAAATTCT",2,26.33,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49L R179F",2
"lib1","SARS-CoV-2","CCACCAGGTTACTACT",2,9.29,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","F8Q A105R G166F S184G",4
"lib1","SARS-CoV-2","CCACCAGTCGTTGATG",1,15.56,8.84,-1.92,0.12,2.11,1.2,0.01,">1 nonsynonymous","D112L E154Q",2
"lib1","SARS-CoV-2","CCACCAGTTCAAAGAA",1,5.99,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","Y21R",1
"lib1","SARS-CoV-2","CCACCATAAAAACCAC",5,0.26,NA,NA,NA,NA,NA,NA,"stop","T3* G51L K56N K94M N107C K114T",6
"lib1","SARS-CoV-2","CCACCATAATCCCGGA",4,39.54,9.91,-0.85,0.11,2.39,1.08,0.01,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","CCACCATATGTCAAAG",3,77.49,6.02,-4.74,0.48,1.5,1.12,0.01,">1 nonsynonymous","S36C F99L D137T",3
"lib1","SARS-CoV-2","CCACCATCGGTTAGTC",1,5.31,10.83,0.06,0.18,3,1.02,0,">1 nonsynonymous","P149M V173L",2
"lib1","SARS-CoV-2","CCACCATCTATTCGTA",3,1.18,NA,NA,NA,NA,NA,NA,"stop","T3S Y39V F99I N120L Y175Q S200*",6
"lib1","SARS-CoV-2","CCACCATGCGTACTAG",2,22.39,9.57,-1.19,0.13,2.8,1.12,0.01,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","CCACCATTAAATATAA",2,79.3,8.75,-2.02,0.07,2.92,1.08,0,"1 nonsynonymous","N157E",1
"lib1","SARS-CoV-2","CCACCATTAACCAATC",3,37.77,9.19,-1.57,0.14,2.61,1.08,0.01,">1 nonsynonymous","C6Q F156L",2
"lib1","SARS-CoV-2","CCACCATTATATCAAG",15,92.36,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6Y D75L Q84L D90S P96S F156L",6
"lib1","SARS-CoV-2","CCACCCAATAAACTAA",5,62.73,10.67,-0.09,0.11,2.83,1.02,0,">1 nonsynonymous","I28M Y39E A105Y",3
"lib1","SARS-CoV-2","CCACCCAATATACAAG",7,58.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22Y V71G R124H",3
"lib1","SARS-CoV-2","CCACCCACACCGTGCA",7,124.67,10.51,-0.25,0.05,2.82,1.07,0,">1 nonsynonymous","I142L P149F",2
"lib1","SARS-CoV-2","CCACCCAGCACCCAGA",11,535.76,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y91H N107I S139G Q168P Q176H T201L",6
"lib1","SARS-CoV-2","CCACCCATACAACTCT",3,171.58,10.74,-0.02,0.05,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACCCCAATGCCCAG",5,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R F47E",2
"lib1","SARS-CoV-2","CCACCCCCAAATTAAG",9,125.43,9.71,-1.05,0.03,2.86,1.04,0,">1 nonsynonymous","S41G Y159W K199L",3
"lib1","SARS-CoV-2","CCACCCCCATAAGAAT",11,127.03,9.81,-0.96,0.13,1.79,1.11,0,">1 nonsynonymous","T85S K94L",2
"lib1","SARS-CoV-2","CCACCCCTCCTAGGAC",4,67.13,10.64,-0.12,0.05,2.91,1.04,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CCACCCCTTCTGTTCA",8,2.27,NA,NA,NA,NA,NA,NA,"stop","N24L T55* G83F L111H N120S",5
"lib1","SARS-CoV-2","CCACCCGACAATGCCG",1,0.32,NA,NA,NA,NA,NA,NA,"stop","C49A N92M G117*",3
"lib1","SARS-CoV-2","CCACCCGCAGATGTGG",8,185.52,10.03,-0.73,0.03,2.9,1.02,0,">1 nonsynonymous","S43D R73Q T100F T201K",4
"lib1","SARS-CoV-2","CCACCCGTAACACAAT",1,14.74,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9M S19L G117E N157I",4
"lib1","SARS-CoV-2","CCACCCGTCATCCAAC",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y P54G T85M",3
"lib1","SARS-CoV-2","CCACCCGTCCGCCAGT",4,25.09,8.84,-1.92,0.17,1.78,1.11,0.02,">1 nonsynonymous","N58K T100S N107G",3
"lib1","SARS-CoV-2","CCACCCTAAAAGTCGA",3,8.65,6,-4.76,2,3,1.16,0,">1 nonsynonymous","L38R D59L I72S W106E C158T",5
"lib1","SARS-CoV-2","CCACCCTACTACATCA",6,34.56,7.18,-3.59,0.41,1.5,1.04,0.06,">1 nonsynonymous","I28K S45L G86D",3
"lib1","SARS-CoV-2","CCACCCTTAAATACCT",1,24.68,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","K48S I80V Y91R A105Y T148R P161D",6
"lib1","SARS-CoV-2","CCACCCTTAGACACCA",3,28.37,8.68,-2.09,0.32,1.64,1.34,0.06,">1 nonsynonymous","I2K G86H V173A",3
"lib1","SARS-CoV-2","CCACCGAACACACTGT",1,7.9,10.27,-0.5,0.2,2.86,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCACCGAACTCCATTT",2,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106D G146T F167L",3
"lib1","SARS-CoV-2","CCACCGACAAGTTATA",2,53.47,10.42,-0.35,0.11,2.45,1,0.01,">1 nonsynonymous","W23M D34L T100R",3
"lib1","SARS-CoV-2","CCACCGACGACGCAAA",1,19.58,10.26,-0.51,0.13,2.68,1.06,0.01,">1 nonsynonymous","I104H S200V",2
"lib1","SARS-CoV-2","CCACCGACTTACATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61N R73*",2
"lib1","SARS-CoV-2","CCACCGATGCCCCAAA",2,39.03,10.56,-0.21,0.05,2.92,1.03,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","CCACCGCACTTCCACG",5,34.95,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","T15E S139T P161I Y178P",4
"lib1","SARS-CoV-2","CCACCGCAGCACCAAT",4,134.85,10.64,-0.13,0.04,2.94,1.03,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","CCACCGCGTCCACATT",9,80.71,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A22R I28E I72F",3
"lib1","SARS-CoV-2","CCACCGTAAACCACCT",4,11.29,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","E10D D68R",2
"lib1","SARS-CoV-2","CCACCGTAATGCTTCC",1,6.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9M F70L I138W T201V",4
"lib1","SARS-CoV-2","CCACCGTACACCGAAT",5,24.99,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","A18V K26P G101I G117F",4
"lib1","SARS-CoV-2","CCACCGTCATTAGTAA",3,29.6,6,-4.76,1.16,1.5,1.15,0.01,">1 nonsynonymous","S43D G51T Q84D F99N G174S",5
"lib1","SARS-CoV-2","CCACCGTTTGTCCACC",5,29.25,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23T P149T P177Q S184M",4
"lib1","SARS-CoV-2","CCACCTAACCATTAGG",3,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V N13I I104T F156R Y178M",5
"lib1","SARS-CoV-2","CCACCTAACCCCACTA",1,14.46,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D68E K87F Y121F",3
"lib1","SARS-CoV-2","CCACCTAAGGTAATCT",3,41.94,7.14,-3.63,0.38,1.5,1.28,0.03,">1 nonsynonymous","K56V A105N P149T",3
"lib1","SARS-CoV-2","CCACCTAATATTTACG",3,30.71,10.73,-0.03,0.06,2.93,1.03,0,">1 nonsynonymous","K87F A190F",2
"lib1","SARS-CoV-2","CCACCTAATCACCCAT",8,160.16,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A42S C49D P177L Y178H",4
"lib1","SARS-CoV-2","CCACCTAGTGTCACCT",2,2.37,NA,NA,NA,NA,NA,NA,"stop","F8* K26P W106L R124S I138L G146E P149Y",7
"lib1","SARS-CoV-2","CCACCTATCAAAGTAC",3,1.43,NA,NA,NA,NA,NA,NA,"stop","R78G D97I Y119G Q168*",4
"lib1","SARS-CoV-2","CCACCTATCATATGTA",4,135.25,10.75,-0.01,0.06,2.87,1.04,0,"1 nonsynonymous","F160G",1
"lib1","SARS-CoV-2","CCACCTATTCTAGATT",6,35.14,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y35D W106H N118D",3
"lib1","SARS-CoV-2","CCACCTCACACCAGCA",1,10.97,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","D34W E154T V180F",3
"lib1","SARS-CoV-2","CCACCTCCGACTACAT",2,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S P133N",2
"lib1","SARS-CoV-2","CCACCTCCTTCCCAAC",11,117.7,10.68,-0.08,0.04,2.93,1.03,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","CCACCTCTCACGATTA",3,54.05,10.15,-0.61,0.07,1.99,1.07,0,">1 nonsynonymous","I72T D98H",2
"lib1","SARS-CoV-2","CCACCTCTTAACCACG",1,41.45,10.14,-0.63,0.04,2.93,1.02,0,">1 nonsynonymous","C61E T170A",2
"lib1","SARS-CoV-2","CCACCTCTTGAAAATA",6,0.56,NA,NA,NA,NA,NA,NA,"stop","T55V Y165*",2
"lib1","SARS-CoV-2","CCACCTGAGGTAAATA",9,1.23,NA,NA,NA,NA,NA,NA,"stop","E10* G86I",2
"lib1","SARS-CoV-2","CCACCTGCCCTCCAGC",3,58.89,10.72,-0.04,0.04,2.92,1.03,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","CCACCTGCTCAGAGAA",2,1,NA,NA,NA,NA,NA,NA,"stop","T15* Y119H",2
"lib1","SARS-CoV-2","CCACCTGCTTTCCGGT",1,11.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10Y A105P R127A Y165W",4
"lib1","SARS-CoV-2","CCACCTGCTTTGTTAC",1,9.76,6,-4.76,1.21,3,1.25,0.01,">1 nonsynonymous","R16C C61N G116T G172P",4
"lib1","SARS-CoV-2","CCACCTTAGAATGCGC",1,10.73,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F47D S139Y",2
"lib1","SARS-CoV-2","CCACCTTATGCATACC",3,31.53,9.91,-0.86,0.07,2.82,1,0,">1 nonsynonymous","S19A S164G K199P",3
"lib1","SARS-CoV-2","CCACGAAAAGATGCCA",3,66.68,9.85,-0.91,0.06,2.86,1.04,0,">1 nonsynonymous","Y50F N109H",2
"lib1","SARS-CoV-2","CCACGAAAGGTATAGA",12,106.62,8.97,-1.79,0.06,2.84,1.09,0,">1 nonsynonymous","N157T T201R",2
"lib1","SARS-CoV-2","CCACGAAAGTACTCTT",3,94.23,10.64,-0.12,0.03,2.97,1,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","CCACGAAATGGCAAAA",1,29.31,10.01,-0.75,0.09,2.13,1.08,0,">1 nonsynonymous","N64R E135W",2
"lib1","SARS-CoV-2","CCACGAACATTAGACT",1,12.89,10.82,0.05,0.11,2.94,1.03,0.01,"1 nonsynonymous","K128M",1
"lib1","SARS-CoV-2","CCACGAACGGTACCAA",3,87.41,10.24,-0.52,0.05,2.76,1.04,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","CCACGAAGAAGCACAA",3,86.83,10.28,-0.48,0.06,2.83,1.01,0,">1 nonsynonymous","D34Q T201N",2
"lib1","SARS-CoV-2","CCACGAAGGATGTCTA",9,165.63,9.7,-1.06,0.12,2.07,1.12,0,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","CCACGAATAATTCAAT",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T N107R R127Q",3
"lib1","SARS-CoV-2","CCACGAATGTAACAGA",1,16.86,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","T140P F167L Y175M",3
"lib1","SARS-CoV-2","CCACGACAGCAGCAAC",2,11.18,10.74,-0.03,0.12,2.89,1.12,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CCACGACATGGCTATC",6,137.73,10.65,-0.11,0.03,2.91,1.03,0,"1 nonsynonymous","G83E",1
"lib1","SARS-CoV-2","CCACGACCACGGGCAG",7,36.18,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I88G K128M",2
"lib1","SARS-CoV-2","CCACGAGAAGTTTCAA",4,50.03,10.88,0.11,0.09,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCACGAGACCGGTGAC",1,14.86,10.54,-0.22,0.14,2.97,1,0,">1 nonsynonymous","A42F V77L",2
"lib1","SARS-CoV-2","CCACGAGCTTTTTATA",5,34.62,10.66,-0.1,0.08,2.81,1.1,0,">1 nonsynonymous","T46I L122N",2
"lib1","SARS-CoV-2","CCACGAGGCGATATGC",1,1.47,NA,NA,NA,NA,NA,NA,"stop","K87E G155*",2
"lib1","SARS-CoV-2","CCACGAGGGGACGTCC",9,28.98,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T3L N13S N64Y V173T",4
"lib1","SARS-CoV-2","CCACGAGGGTTGAAAT",2,58.16,10.66,-0.1,0.05,2.95,1,0,"1 nonsynonymous","F47M",1
"lib1","SARS-CoV-2","CCACGAGGTGTATGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","N1S N13I S19P S41* V173L K198R",6
"lib1","SARS-CoV-2","CCACGATAAATTACAG",4,15.14,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L38P D59T N107C K128W",4
"lib1","SARS-CoV-2","CCACGATAACAGGAAC",2,20.35,10.72,-0.05,0.05,2.94,1.04,0,"1 nonsynonymous","K132Y",1
"lib1","SARS-CoV-2","CCACGATGCAAAAGCA",10,1.34,NA,NA,NA,NA,NA,NA,"stop","A22S T46* C61S N151P",4
"lib1","SARS-CoV-2","CCACGATGCAACCTGC",4,8.51,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L38W L131R T148L",3
"lib1","SARS-CoV-2","CCACGATGGTATGCCT",4,30.92,7.57,-3.2,0.35,1.5,1.17,0.06,">1 nonsynonymous","P133H G146F",2
"lib1","SARS-CoV-2","CCACGATGGTTGTATC",10,35.02,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","E10G T15N C150I",3
"lib1","SARS-CoV-2","CCACGATTAAGAAAAA",2,21.69,9.12,-1.64,0.11,2.02,1.09,0,">1 nonsynonymous","F8E V37M Y66T",3
"lib1","SARS-CoV-2","CCACGCAAAACAATCA",2,37.42,6.06,-4.7,1.26,1.5,1.26,0.05,"1 nonsynonymous","D68A",1
"lib1","SARS-CoV-2","CCACGCAATGGTCTTG",5,0.17,NA,NA,NA,NA,NA,NA,"stop","T3V S19* I80A D97V",4
"lib1","SARS-CoV-2","CCACGCACTTGCCAAC",7,114.42,10.61,-0.15,0.03,2.92,1.03,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CCACGCAGAAACGAGG",4,117.8,8.51,-2.26,0.38,1.5,1,0.07,">1 nonsynonymous","I72T R136D",2
"lib1","SARS-CoV-2","CCACGCATATTACTAA",3,77.24,10.27,-0.49,0.06,2.7,1.1,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","CCACGCATCATTAACC",9,120.88,9.44,-1.33,0.12,1.5,1.08,0.01,">1 nonsynonymous","V37W D68E D97A",3
"lib1","SARS-CoV-2","CCACGCCACTTTAAGA",2,59.78,10.34,-0.43,0.08,2.79,1.01,0,">1 nonsynonymous","L60W G155T",2
"lib1","SARS-CoV-2","CCACGCCATGAGTAAC",4,48.75,9.76,-1.01,0.11,2.15,1.1,0.01,">1 nonsynonymous","N1L C6W",2
"lib1","SARS-CoV-2","CCACGCCTGGGCAACA",3,18.8,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A67H W106D P149L",3
"lib1","SARS-CoV-2","CCACGCGAAAATACTA",1,12.58,10.51,-0.26,0.2,2.85,1.09,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CCACGCGAGCCTGACA",6,39.54,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N4C A67S A81R W106K Y159Q",5
"lib1","SARS-CoV-2","CCACGCGGATTCTTGG",1,64.97,6.18,-4.59,1.02,1.5,1.27,0.05,">1 nonsynonymous","F44D R127T E186T",3
"lib1","SARS-CoV-2","CCACGCTTAAAAACAG",1,19.2,6,-4.76,1.41,1.5,1.14,0.01,">1 nonsynonymous","A89T I104R V115S",3
"lib1","SARS-CoV-2","CCACGCTTTTGAAACG",2,73,9.38,-1.39,0.08,2.69,1.14,0,">1 nonsynonymous","G117A K128M",2
"lib1","SARS-CoV-2","CCACGGAAATAGATCA",14,9.95,NA,NA,NA,NA,NA,NA,"stop","C6* K48I S164Y",3
"lib1","SARS-CoV-2","CCACGGAATGGTCAAA",10,66.56,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1L C31S D59C N92S T201G",5
"lib1","SARS-CoV-2","CCACGGACCAACCAAT",1,15.03,10.68,-0.08,0.12,2.82,1.13,0.01,">1 nonsynonymous","S53N T201H",2
"lib1","SARS-CoV-2","CCACGGAGAAACCAGG",5,135.52,10.77,0,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACGGAGAAGCTAAC",4,78.27,8.6,-2.17,0.17,1.5,1.09,0.01,">1 nonsynonymous","S69D E154L",2
"lib1","SARS-CoV-2","CCACGGAGATGTCCAG",4,0.74,NA,NA,NA,NA,NA,NA,"stop","E10I L122* Q168Y",3
"lib1","SARS-CoV-2","CCACGGATAAAAAATA",3,41.84,8.7,-2.07,0.1,1.86,1.12,0,">1 nonsynonymous","G83Y L95I Y121R",3
"lib1","SARS-CoV-2","CCACGGATCTCTAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S K56* Y91T W106R P133W",5
"lib1","SARS-CoV-2","CCACGGGAGTAGGCAA",5,62.26,6.15,-4.61,0.77,1.5,1.18,0.02,">1 nonsynonymous","L38K S45P Q168P",3
"lib1","SARS-CoV-2","CCACGGGTCAATCATG",5,77.53,10.08,-0.68,0.05,2.9,1,0,">1 nonsynonymous","P7D G146Y A190L K199Y",4
"lib1","SARS-CoV-2","CCACGGGTCCATAGAT",5,0.1,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib1","SARS-CoV-2","CCACGGGTTTGTTCGT",6,106.18,10.57,-0.19,0.05,2.92,1.04,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","CCACGGTCTGTACCTG",4,39.65,10.71,-0.05,0.05,2.92,1.06,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","CCACGGTGCTTACAGA",3,67.57,10.59,-0.17,0.05,2.95,1.02,0,">1 nonsynonymous","G83Q F160Q",2
"lib1","SARS-CoV-2","CCACGGTTACACCGAA",5,97.29,8.92,-1.85,0.08,2.62,1.12,0,">1 nonsynonymous","N157D F167Y",2
"lib1","SARS-CoV-2","CCACGTAAAATCTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* Y50L",2
"lib1","SARS-CoV-2","CCACGTAAACACATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V V20R K48V L131V",4
"lib1","SARS-CoV-2","CCACGTAAATCAACAA",2,11.19,10.82,0.06,0.05,2.98,1,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","CCACGTAAGCATGATT",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H L60T N107R Q144K",4
"lib1","SARS-CoV-2","CCACGTAATACTTCTA",8,76.12,6,-4.76,1.96,1.5,1.22,0.02,">1 nonsynonymous","V77C D98S P161S",3
"lib1","SARS-CoV-2","CCACGTATAATACCCC",9,114.61,8.55,-2.21,0.08,2.55,1.09,0,">1 nonsynonymous","T63G I142D",2
"lib1","SARS-CoV-2","CCACGTATACCGACCT",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S G101L V115F A145V",4
"lib1","SARS-CoV-2","CCACGTATTTAGGCCC",2,36.19,10.44,-0.33,0.05,2.85,1.09,0,">1 nonsynonymous","S36D S139A V173N",3
"lib1","SARS-CoV-2","CCACGTCATAGTGAAA",2,3.56,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCACGTCCAATAACGT",6,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T D98N P169M V182Y",4
"lib1","SARS-CoV-2","CCACGTCTCGATGAAT",5,53.85,10.44,-0.32,0.06,2.84,1.06,0,"1 nonsynonymous","R16P",1
"lib1","SARS-CoV-2","CCACGTGAGGGCAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N13* K94V K132L",3
"lib1","SARS-CoV-2","CCACGTGCCCTAATGC",5,92.75,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A14S S43F A105G Y159R",4
"lib1","SARS-CoV-2","CCACGTGGTATGAGGT",12,9.79,NA,NA,NA,NA,NA,NA,"stop","I2* G9T S41L",3
"lib1","SARS-CoV-2","CCACGTTACACAAATC",4,33.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6I S139P N157T",3
"lib1","SARS-CoV-2","CCACGTTAGCTAAACA",11,113.15,10.11,-0.65,0.06,2.81,1.08,0,">1 nonsynonymous","I2L Y91W L122F Y143F",4
"lib1","SARS-CoV-2","CCACGTTATTAATCTT",4,13.56,6,-4.76,1.38,3,1.13,0.01,">1 nonsynonymous","K26L V103S Y121T T170R",4
"lib1","SARS-CoV-2","CCACGTTTTATAACAA",9,35.2,7.05,-3.72,0.45,1.5,1.11,0.05,">1 nonsynonymous","D34V S43L I142A C158Y Y165S H189T",6
"lib1","SARS-CoV-2","CCACTAAACGTGGCAA",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105N P197Q",2
"lib1","SARS-CoV-2","CCACTAAACGTTATCA",6,40.13,10.75,-0.01,0.04,2.9,1.05,0,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","CCACTAAACTCGAGTT",6,99.15,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K26V G86W K128S K198C",4
"lib1","SARS-CoV-2","CCACTAAATATGAACG",1,12.85,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89R Y143V",2
"lib1","SARS-CoV-2","CCACTAAATTTCCAAT",2,10.53,8.29,-2.48,0.37,1.5,1.03,0.05,">1 nonsynonymous","K56D L131K",2
"lib1","SARS-CoV-2","CCACTAACAATTTCAC",4,108.24,6,-4.76,2,3,1.21,0,"1 nonsynonymous","G172K",1
"lib1","SARS-CoV-2","CCACTAACATCCGTTA",1,51.58,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C61R W106L Y119R N157L",4
"lib1","SARS-CoV-2","CCACTAACTCAACATC",3,71.75,10.69,-0.08,0.03,2.96,1.02,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","CCACTAACTCCATAAG",2,15.26,10.74,-0.02,0.08,2.96,1,0,"1 nonsynonymous","F134S",1
"lib1","SARS-CoV-2","CCACTAAGAAAGTTAC",7,66.84,6,-4.76,1.03,1.5,1.17,0.01,">1 nonsynonymous","Y39G T85L A105D",3
"lib1","SARS-CoV-2","CCACTAAGAATTACAC",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E V71H",2
"lib1","SARS-CoV-2","CCACTAAGGTCAGAAA",5,140.77,10.55,-0.22,0.05,2.83,1.1,0,">1 nonsynonymous","I2T V115L S129I T201D",4
"lib1","SARS-CoV-2","CCACTAAGGTTCTAAT",6,14.13,6.01,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A22N N107L V180D",3
"lib1","SARS-CoV-2","CCACTAATCTTGCCAG",1,40.24,10.75,-0.01,0.04,2.96,1.01,0,"1 nonsynonymous","G196N",1
"lib1","SARS-CoV-2","CCACTACGAACGTGCC",2,43.05,10.62,-0.14,0.04,2.9,1.05,0,"1 nonsynonymous","K56C",1
"lib1","SARS-CoV-2","CCACTACTCTGCCCAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","I28* I138L",2
"lib1","SARS-CoV-2","CCACTAGAACCAGTTA",4,27.8,10.83,0.07,0.08,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACTAGATACTAGAG",1,28.76,6.05,-4.71,1.16,1.5,1.22,0.03,">1 nonsynonymous","N118L P161S",2
"lib1","SARS-CoV-2","CCACTAGATCCCCCTA",1,51.4,10.32,-0.44,0.04,2.95,1.01,0,">1 nonsynonymous","S29K T46F",2
"lib1","SARS-CoV-2","CCACTAGCAACAACGA",11,1.25,NA,NA,NA,NA,NA,NA,"stop","Y91V N107P R124*",3
"lib1","SARS-CoV-2","CCACTAGCCGTAACAA",12,102.64,6.17,-4.59,0.53,1.5,1.2,0.01,">1 nonsynonymous","S43Q T85P L131G",3
"lib1","SARS-CoV-2","CCACTAGGAATTCCCC",2,22.48,6.23,-4.53,0.93,1.5,1.16,0.04,">1 nonsynonymous","F12I T55L K87V Y175K K199L",5
"lib1","SARS-CoV-2","CCACTAGGTTAAAAAA",2,23.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y35H P161L",2
"lib1","SARS-CoV-2","CCACTAGGTTAGCTCA",2,17.57,9.94,-0.83,0.09,2.16,1,0,">1 nonsynonymous","K48R P133L T201A",3
"lib1","SARS-CoV-2","CCACTATAAACAAATC",3,10.24,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T46A A89S V103H D112L G117P F156E",6
"lib1","SARS-CoV-2","CCACTATAGTGTAAAT",10,3.15,NA,NA,NA,NA,NA,NA,"stop","S43P G83I N92S K199*",4
"lib1","SARS-CoV-2","CCACTATCCCAACGCA",5,102.67,9.44,-1.33,0.08,2.48,1.1,0,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","CCACTATGTTGCCACA",2,25.15,7.21,-3.56,0.33,1.5,1,0.03,">1 nonsynonymous","I2V G9S V32L D34P Y119V R127P",6
"lib1","SARS-CoV-2","CCACTATTGTGTCCAC",3,5.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q G86V N171R",3
"lib1","SARS-CoV-2","CCACTCAAACTCTTCT",14,70.83,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I28C Y91S D97Y",3
"lib1","SARS-CoV-2","CCACTCAACCTCCCAG",5,1.2,NA,NA,NA,NA,NA,NA,"stop","D137L K198*",2
"lib1","SARS-CoV-2","CCACTCAATGCTCGAC",3,53.27,8.95,-1.82,0.11,2.27,1.17,0.01,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","CCACTCAATTTATAAC",3,43.21,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K87I V180G",2
"lib1","SARS-CoV-2","CCACTCACACCCAAAA",1,3.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","CCACTCCACCCCCGGA",4,96.05,8.38,-2.39,0.14,2,1.13,0.01,">1 nonsynonymous","T63S D112M",2
"lib1","SARS-CoV-2","CCACTCCACTAGCAGA",2,123.78,9.85,-0.92,0.05,2.81,1.03,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","CCACTCCCGGCAGACG",1,19.54,10.78,0.02,0.07,2.99,1.01,0,">1 nonsynonymous","T3K I104L",2
"lib1","SARS-CoV-2","CCACTCCGTCAGCGGT",4,14.49,6.09,-4.68,0.93,1.99,1.26,0.02,">1 nonsynonymous","S19R T85N N118S",3
"lib1","SARS-CoV-2","CCACTCCTTACGCTGA",2,0.85,NA,NA,NA,NA,NA,NA,"stop","C6* V37R",2
"lib1","SARS-CoV-2","CCACTCGAAATTAGAA",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I K56G N107F Y159P Y165V T201I",6
"lib1","SARS-CoV-2","CCACTCGACCTCACCA",6,16.49,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","S43L N58T A89Y I104T R136D Q168R",6
"lib1","SARS-CoV-2","CCACTCGATCCGTACT",3,38.31,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L38I F62E I80S S108F P149S G174D",6
"lib1","SARS-CoV-2","CCACTCGCAATAGGCA",10,80.94,9.75,-1.02,0.14,1.87,1.09,0.01,"1 nonsynonymous","P82A",1
"lib1","SARS-CoV-2","CCACTCGCAGACCTCT",3,20.06,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","Y21A C150S",2
"lib1","SARS-CoV-2","CCACTCGGTTCACAAA",6,46.71,10.79,0.02,0.09,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCACTCTACAAAATAC",3,19.11,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","S41F G51T D90K N130L N171G",5
"lib1","SARS-CoV-2","CCACTCTAGAAGCTAA",2,28.01,6.04,-4.73,1,1.5,1.12,0.02,">1 nonsynonymous","S36Q A81F G146R",3
"lib1","SARS-CoV-2","CCACTCTAGTACAGTA",2,15.07,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C49S A105V",2
"lib1","SARS-CoV-2","CCACTCTATTCAAGGT",1,27.66,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F70L D97E K114D Y119L I138S F156K",6
"lib1","SARS-CoV-2","CCACTCTGTCCATACC",3,12.66,9.03,-1.73,0.3,1.5,1.03,0.03,">1 nonsynonymous","N58M I88V W106Q",3
"lib1","SARS-CoV-2","CCACTCTTTAAATGGT",2,56.27,10.65,-0.12,0.05,2.9,1.05,0,">1 nonsynonymous","N4L S45D",2
"lib1","SARS-CoV-2","CCACTGAAAACTAAAT",3,90.39,10.49,-0.28,0.06,2.9,1.05,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","CCACTGAAAACTGAAG",3,36.17,10.09,-0.67,0.12,2.44,1.05,0.01,">1 nonsynonymous","R27Y P133Y",2
"lib1","SARS-CoV-2","CCACTGAAAGAAGGAC",1,10.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R F62L I88Y",3
"lib1","SARS-CoV-2","CCACTGAAATCTTATG",1,69.15,10.79,0.03,0.06,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCACTGAAATGATCAA",4,50.34,6.09,-4.68,0.86,1.58,1.2,0.02,">1 nonsynonymous","R136T C150E",2
"lib1","SARS-CoV-2","CCACTGAATACTAACC",13,199.94,10.62,-0.14,0.05,2.87,1.06,0,">1 nonsynonymous","F62Y D97Y",2
"lib1","SARS-CoV-2","CCACTGACACGTAATA",4,31.62,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64L I88M L95T D112T",4
"lib1","SARS-CoV-2","CCACTGACTATGACAT",5,19.41,9.79,-0.98,0.12,1.86,1.07,0,">1 nonsynonymous","A14F D34N Y178F T201S",4
"lib1","SARS-CoV-2","CCACTGCAAAGCCCAG",2,22.26,9.98,-0.79,0.14,2.63,1.05,0.01,">1 nonsynonymous","L5R V173P",2
"lib1","SARS-CoV-2","CCACTGCAAGCTTTAG",1,0.93,NA,NA,NA,NA,NA,NA,"stop","S19* D34Y",2
"lib1","SARS-CoV-2","CCACTGCGAGACAATG",2,15.28,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D59L N157A Y165A S184Y",4
"lib1","SARS-CoV-2","CCACTGCGCGAGTAAA",6,36.84,10.78,0.01,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACTGGAAAACACTT",1,7.58,10.26,-0.51,0.26,2.36,1,0.03,">1 nonsynonymous","N1E P96Q",2
"lib1","SARS-CoV-2","CCACTGGGCCCAAGTA",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R L162F",2
"lib1","SARS-CoV-2","CCACTGGTAAAAAACC",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50P L162H",2
"lib1","SARS-CoV-2","CCACTGGTACGTTCGG",1,31.31,10.69,-0.08,0.12,2.92,1.07,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CCACTGTATTCTATAA",3,34.95,10.74,-0.02,0.06,2.92,1.03,0,">1 nonsynonymous","T63K T201A",2
"lib1","SARS-CoV-2","CCACTGTGATAGGACT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66S G117Y V173*",3
"lib1","SARS-CoV-2","CCACTGTTACGGTAAA",3,75.19,10.78,0.02,0.04,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACTTAACAACGACC",1,55.51,10.59,-0.17,0.06,2.97,1,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","CCACTTACAGATAACA",6,21.3,7.49,-3.28,0.42,1.5,1.05,0.06,">1 nonsynonymous","S45N T55V T100G Q163W",4
"lib1","SARS-CoV-2","CCACTTACATGATTCG",5,48.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N58Y A81L C102T R136S",4
"lib1","SARS-CoV-2","CCACTTACCTAACAAG",6,55.2,8.9,-1.86,0.08,2.75,1.09,0,">1 nonsynonymous","N1K Q84S N157H",3
"lib1","SARS-CoV-2","CCACTTACTAAACACC",1,10.91,10.47,-0.3,0.09,2.89,1.07,0,">1 nonsynonymous","S41W E135Q",2
"lib1","SARS-CoV-2","CCACTTAGGTTTACTG",8,37.59,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G9P Q84E K94C P133R",4
"lib1","SARS-CoV-2","CCACTTATAAAAGGTA",2,8.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29A N40W G83F R127W",4
"lib1","SARS-CoV-2","CCACTTCTTCTACATA",5,4.7,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","CCACTTGAACATCGCC",5,32.88,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","L60P T100I R124N S147M",4
"lib1","SARS-CoV-2","CCACTTGCACGCGGCA",1,5.04,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K56G V71K T85S",3
"lib1","SARS-CoV-2","CCACTTGCGCACTGCG",3,29.84,10.82,0.05,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCACTTGGACCCGATC",10,121.53,10.25,-0.52,0.05,2.81,1.01,0,">1 nonsynonymous","I2T V37A F44Y W106M",4
"lib1","SARS-CoV-2","CCACTTGTAAAAATCA",3,0,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","CCACTTGTACTCATCA",6,175.65,10.36,-0.41,0.04,2.84,1.02,0,">1 nonsynonymous","S139L T201S",2
"lib1","SARS-CoV-2","CCACTTGTGCTTAGCG",3,80.12,10.14,-0.63,0.04,2.75,1.03,0,">1 nonsynonymous","F44P K56V",2
"lib1","SARS-CoV-2","CCACTTTATAAAGAAG",1,16.6,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S41E D68P",2
"lib1","SARS-CoV-2","CCACTTTATAACATCA",14,111.05,10.18,-0.58,0.07,2.8,1,0,">1 nonsynonymous","A14V A22H",2
"lib1","SARS-CoV-2","CCACTTTCCTTTGGGA",2,12.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","CCACTTTGACATATGT",1,7.92,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","C6I N92S C102Y N118C G172W",5
"lib1","SARS-CoV-2","CCACTTTGCGAGGTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* G116L T201L",3
"lib1","SARS-CoV-2","CCACTTTGGTGTAAGT",3,42.73,6.17,-4.6,0.77,1.5,1.19,0.03,">1 nonsynonymous","V37M W106T Y121T P133S C195F T201W",6
"lib1","SARS-CoV-2","CCACTTTTGAATATAA",4,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V K94V D98T A105I",4
"lib1","SARS-CoV-2","CCACTTTTGTAATAGA",3,34.42,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S43A K56T S139C C158H",4
"lib1","SARS-CoV-2","CCAGAAAAAGACACCG",2,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11H D59L E141N",3
"lib1","SARS-CoV-2","CCAGAAAAATGAGATT",2,41.29,7.43,-3.33,0.29,1.6,1.24,0.03,">1 nonsynonymous","R78E G117A E141S F156D",4
"lib1","SARS-CoV-2","CCAGAAAACTGAAGAG",5,79.18,10.7,-0.06,0.05,2.92,1.04,0,"1 nonsynonymous","K132T",1
"lib1","SARS-CoV-2","CCAGAAACAAGTGCCG",6,2.75,NA,NA,NA,NA,NA,NA,"stop","R16* W23L V37S G86C N118D",5
"lib1","SARS-CoV-2","CCAGAAACACAATAGT",2,38.24,10.85,0.09,0.08,2.81,1.11,0,">1 nonsynonymous","I2K L122F",2
"lib1","SARS-CoV-2","CCAGAAACCATATCTA",4,21.54,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F99N L122C Q168L",3
"lib1","SARS-CoV-2","CCAGAAACTCCGTACC",5,54.13,6.67,-4.09,0.44,1.5,1.27,0.02,">1 nonsynonymous","F44A K132T V180L",3
"lib1","SARS-CoV-2","CCAGAAAGAAGGACAA",5,37.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G83I A89Y Y121M",3
"lib1","SARS-CoV-2","CCAGAAAGGTTCAAAG",12,77.64,8.57,-2.2,0.09,2.42,1.06,0,">1 nonsynonymous","T3V Y119L N151I T201Y",4
"lib1","SARS-CoV-2","CCAGAAATAATTGTAT",4,43.92,10.82,0.05,0.04,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGAAATACACTTCA",2,6.35,10.74,-0.02,0.26,2.94,1,0.01,"1 nonsynonymous","Y39C",1
"lib1","SARS-CoV-2","CCAGAAATAGTGTCAT",4,49.16,10.83,0.06,0.09,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGAAATGAGAAACG",6,75.52,10.77,0.01,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGAACAGAAAGATT",3,7.26,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","R124T D137H",2
"lib1","SARS-CoV-2","CCAGAACAGACTAGTA",4,37.66,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N40L K87T V182S",3
"lib1","SARS-CoV-2","CCAGAACATAAACATA",4,16.32,6,-4.76,2,3,1.06,0,">1 nonsynonymous","A18W A105L Y119Q",3
"lib1","SARS-CoV-2","CCAGAACATAATAGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5H T55*",2
"lib1","SARS-CoV-2","CCAGAACATATCATCT",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F A81T P169E",3
"lib1","SARS-CoV-2","CCAGAACCCGACGAAC",5,2.57,NA,NA,NA,NA,NA,NA,"stop","N64* G116L S139F",3
"lib1","SARS-CoV-2","CCAGAACCGACAGTAA",2,19.84,8.2,-2.56,0.44,1.5,1,0.08,">1 nonsynonymous","A14V N58E D90A S147A E154F",5
"lib1","SARS-CoV-2","CCAGAACGAACACACG",2,19.71,9.74,-1.02,0.18,1.73,1.06,0.01,">1 nonsynonymous","T15L K56T P96S K114Y",4
"lib1","SARS-CoV-2","CCAGAACGCAATTATA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L F99R V103L D112E",4
"lib1","SARS-CoV-2","CCAGAACTTATATAAG",6,74.56,10.18,-0.59,0.1,2.6,1.04,0,">1 nonsynonymous","N4L R136H",2
"lib1","SARS-CoV-2","CCAGAAGAAAATCATC",6,2.74,NA,NA,NA,NA,NA,NA,"stop","F8R Y50* S184I T201Q",4
"lib1","SARS-CoV-2","CCAGAAGACGACATTC",2,24.13,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C6L G116V G152T V173S P197L",5
"lib1","SARS-CoV-2","CCAGAAGCATTGCTGC",4,1.99,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCAGAAGGTCTATTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","P96I K128Y G146S Q163*",4
"lib1","SARS-CoV-2","CCAGAAGTTACAGTTT",2,15.97,6.57,-4.2,0.79,1.5,1.23,0.07,">1 nonsynonymous","K26G W106C",2
"lib1","SARS-CoV-2","CCAGAATACATTGACA",6,155.83,10.53,-0.24,0.05,2.66,1.06,0,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","CCAGAATAGCAGCACG",2,17.23,6.69,-4.07,0.4,1.5,1.17,0.02,">1 nonsynonymous","G51F D90S D97L",3
"lib1","SARS-CoV-2","CCAGAATCCCAGATTT",1,9.54,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L57C I80R L95N",3
"lib1","SARS-CoV-2","CCAGACAAACTACGCA",8,62.7,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L57S R124M Q163I",3
"lib1","SARS-CoV-2","CCAGACAAGATGCTGG",4,15.53,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N1R S36F S43W F70S L95Q",5
"lib1","SARS-CoV-2","CCAGACAAGGGGAAAA",4,20.68,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C102R N157P T170N Y178I",4
"lib1","SARS-CoV-2","CCAGACAATATCACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S45M Y91R F156*",3
"lib1","SARS-CoV-2","CCAGACACATGTACAC",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38K K87F C102S A105P",4
"lib1","SARS-CoV-2","CCAGACACCACAATCT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","A33R L60P T100* I104H L122K P161R Q168W",7
"lib1","SARS-CoV-2","CCAGACAGACACACCA",1,22.14,8.92,-1.85,0.12,2.21,1.14,0.01,">1 nonsynonymous","T3M N58Y K114L T170W",4
"lib1","SARS-CoV-2","CCAGACAGCGAACCAC",1,21.67,10.24,-0.52,0.13,2.43,1,0.01,">1 nonsynonymous","P7L P191L",2
"lib1","SARS-CoV-2","CCAGACATAGCGTTCA",2,0.98,NA,NA,NA,NA,NA,NA,"stop","A22S W106G D112G L122*",4
"lib1","SARS-CoV-2","CCAGACATGAGAAGCA",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E D98R I138Q",3
"lib1","SARS-CoV-2","CCAGACCTGAGACGAG",5,34.85,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5E A81L L95P P161Y",4
"lib1","SARS-CoV-2","CCAGACCTTTGGATTC",7,36.12,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","Y21N N92V V103D",3
"lib1","SARS-CoV-2","CCAGACGAATTCCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50Q N64S L95* L122S P161Q",5
"lib1","SARS-CoV-2","CCAGACGACACAAACC",2,6.21,8.48,-2.29,0.41,2.32,1,0.06,">1 nonsynonymous","V77M P96A F156T",3
"lib1","SARS-CoV-2","CCAGACGACGACCGTA",13,84.71,9.7,-1.06,0.09,1.85,1.09,0,"1 nonsynonymous","K94L",1
"lib1","SARS-CoV-2","CCAGACGCTAGAAGGG",6,38.75,10.04,-0.72,0.09,1.93,1.07,0,">1 nonsynonymous","L57Y P149Q Q163L",3
"lib1","SARS-CoV-2","CCAGACGTACACGCAA",6,0.53,NA,NA,NA,NA,NA,NA,"stop","G9A N64I S113P T148N N151* G166C",6
"lib1","SARS-CoV-2","CCAGACTAACAGAGAG",2,7.47,9.12,-1.65,0.62,1.75,1.04,0.07,"1 nonsynonymous","D137L",1
"lib1","SARS-CoV-2","CCAGACTAAGTAGAGA",4,1.31,NA,NA,NA,NA,NA,NA,"stop","F44* G74T P82Q K87T V103N S113H L122D E141* G146T P169I P197S T201I",12
"lib1","SARS-CoV-2","CCAGACTCAGAGCGGG",2,43.59,10.36,-0.41,0.07,2.83,1.12,0,">1 nonsynonymous","N1M Q144T V153T",3
"lib1","SARS-CoV-2","CCAGACTGAAGTTACT",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S N107V S184Q",3
"lib1","SARS-CoV-2","CCAGAGAATACCCTAT",10,61.48,6,-4.76,2,1.5,1.27,0.01,">1 nonsynonymous","F47R N58A G83D",3
"lib1","SARS-CoV-2","CCAGAGACCCATTCCT",17,52.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V P82T",2
"lib1","SARS-CoV-2","CCAGAGACCGCACAAT",5,125.82,10.63,-0.14,0.06,2.92,1,0,">1 nonsynonymous","L5R Y39G",2
"lib1","SARS-CoV-2","CCAGAGAGCAGCCCTA",4,49.2,10.25,-0.52,0.12,2.52,1.04,0.01,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","CCAGAGATTGAAAATA",4,37.43,10.72,-0.05,0.06,2.97,1,0,">1 nonsynonymous","A42D L60M",2
"lib1","SARS-CoV-2","CCAGAGCAAATAATAA",5,145.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S69M N157V",2
"lib1","SARS-CoV-2","CCAGAGCCAAATGTAA",6,55.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6A S36N P161Y",3
"lib1","SARS-CoV-2","CCAGAGCGTTCCCCAA",4,0.75,NA,NA,NA,NA,NA,NA,"stop","V20W T55* L131E",3
"lib1","SARS-CoV-2","CCAGAGCTTCCCACTT",5,30.79,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T3P S45L G51T Y93I T100L D137K",6
"lib1","SARS-CoV-2","CCAGAGGAAGACGACT",1,36.49,9.39,-1.38,0.14,1.74,1.13,0.01,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","CCAGAGGACGTTTCAA",2,7.21,10.39,-0.38,0.2,2.94,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCAGAGGATAGTCGGG",15,63.06,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G86V K94D V103H",3
"lib1","SARS-CoV-2","CCAGAGGGCCCTCTAC",2,52.05,10.69,-0.07,0.07,2.84,1.11,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","CCAGAGGGTAGTTTTA",1,5.45,8.98,-1.78,0.23,2.58,1.03,0.01,">1 nonsynonymous","T15S A89G",2
"lib1","SARS-CoV-2","CCAGAGTATGAAGTAT",11,122.79,10.75,-0.01,0.06,2.88,1.04,0,">1 nonsynonymous","A42G D90N P149S",3
"lib1","SARS-CoV-2","CCAGAGTTATTTCGTG",5,33.09,7.04,-3.73,0.37,1.5,1.06,0.04,">1 nonsynonymous","R25S P133D S184L K198R",4
"lib1","SARS-CoV-2","CCAGATAAATATTTAT",3,5.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61S A105E L122T",3
"lib1","SARS-CoV-2","CCAGATAATGTGCATG",7,58.71,9.83,-0.93,0.08,2.74,1.04,0,">1 nonsynonymous","A18C A22T K87N V153K",4
"lib1","SARS-CoV-2","CCAGATACCTTATGAA",3,35.8,6,-4.76,2,3,1.2,0,">1 nonsynonymous","E10T L57Y N171K",3
"lib1","SARS-CoV-2","CCAGATAGACGAAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D T100L K128G Q163A Q176L",5
"lib1","SARS-CoV-2","CCAGATAGAGACTAAA",4,74.53,8.77,-1.99,0.08,2.78,1.08,0,">1 nonsynonymous","L5W S36V Q168L S184W",4
"lib1","SARS-CoV-2","CCAGATAGGGTCGAGA",5,75.65,10.69,-0.08,0.05,2.89,1.03,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","CCAGATATACCTAGGT",7,32.07,6.98,-3.78,0.48,1.5,1.06,0.05,">1 nonsynonymous","S69W E76P P96T Y159I",4
"lib1","SARS-CoV-2","CCAGATATATATGTTG",5,35.14,8.66,-2.11,0.17,1.67,1.1,0.01,">1 nonsynonymous","N64L N107V",2
"lib1","SARS-CoV-2","CCAGATATCATCAGGG",5,35.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34G G51E",2
"lib1","SARS-CoV-2","CCAGATATTAGACAAC",1,13.9,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D68G R73L",2
"lib1","SARS-CoV-2","CCAGATCAAGTGTTTT",1,33.19,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D59M F70L T148M",3
"lib1","SARS-CoV-2","CCAGATCAATACTTAT",3,58.86,8.06,-2.71,0.2,1.5,1.16,0.01,">1 nonsynonymous","L60H D112M",2
"lib1","SARS-CoV-2","CCAGATCTACGAACAA",4,58.22,10.29,-0.48,0.06,2.78,1.02,0,">1 nonsynonymous","K132Y E141F",2
"lib1","SARS-CoV-2","CCAGATGAATTCTGAG",3,24.5,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9N S19V F47Y N64T C158S",5
"lib1","SARS-CoV-2","CCAGATGCCAATTATT",3,15.17,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","L5D F99K A105P Y143F",4
"lib1","SARS-CoV-2","CCAGATGGCCGCTTGT",5,10.71,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","C102S C158S",2
"lib1","SARS-CoV-2","CCAGATGTATTTCATA",3,56.36,10.67,-0.09,0.06,2.91,1.03,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","CCAGATTAAAAGTAAT",1,23.83,10.61,-0.16,0.09,2.89,1.09,0,">1 nonsynonymous","T55L N58S",2
"lib1","SARS-CoV-2","CCAGATTAAACCTCTC",7,67.86,6.86,-3.91,0.37,1.5,1.14,0.02,">1 nonsynonymous","V37Y L60S N107I",3
"lib1","SARS-CoV-2","CCAGATTAACAATTAC",3,32.97,9.79,-0.97,0.1,2.12,1.07,0,">1 nonsynonymous","D34T G155P N171F",3
"lib1","SARS-CoV-2","CCAGATTCTGGAGCAA",3,50.58,8.64,-2.13,0.24,1.5,1.03,0.02,">1 nonsynonymous","D98Y N107T",2
"lib1","SARS-CoV-2","CCAGATTGAAAACATG",1,5.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCAGATTTAACTAGAT",3,25.26,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","D68W N107V",2
"lib1","SARS-CoV-2","CCAGATTTGTTGGCCA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","S29P D68* I72* N107D F167V",5
"lib1","SARS-CoV-2","CCAGATTTTCGTAGAG",2,21.24,9.53,-1.24,0.34,2.14,1,0.06,">1 nonsynonymous","N107G Y143W",2
"lib1","SARS-CoV-2","CCAGATTTTGCAATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41G K56M G86* D98Y",4
"lib1","SARS-CoV-2","CCAGCAAAAACTGTGG",1,30.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A81F G155H T170I L188H K199H",5
"lib1","SARS-CoV-2","CCAGCAAAACGGAGGC",12,261.33,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R136Y F156G V182F",3
"lib1","SARS-CoV-2","CCAGCAACCATATAAG",5,77.35,10.63,-0.13,0.04,2.97,1.02,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","CCAGCAACGGCCACAC",7,2.09,NA,NA,NA,NA,NA,NA,"stop","N40* V103C E141R",3
"lib1","SARS-CoV-2","CCAGCAACTTACATAA",6,20.4,6,-4.76,1.56,1.5,1.18,0.04,">1 nonsynonymous","G86M L125P",2
"lib1","SARS-CoV-2","CCAGCAATAGTTAGTG",1,13.4,8.68,-2.09,0.27,1.68,1.06,0.03,">1 nonsynonymous","F8C S41Q D90Q N109R",4
"lib1","SARS-CoV-2","CCAGCAATATTATTCA",6,62.35,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14M Y159L G166E",3
"lib1","SARS-CoV-2","CCAGCAATGCACCTCC",4,2.08,NA,NA,NA,NA,NA,NA,"stop","N4E S41P T46* A81G D112S F156K V180I",7
"lib1","SARS-CoV-2","CCAGCACCTACCTGAA",10,81.45,8.82,-1.94,0.14,1.72,1.16,0.01,">1 nonsynonymous","A14H C31L L38P",3
"lib1","SARS-CoV-2","CCAGCACGATATAACT",9,97.75,6.13,-4.63,0.38,1.5,1.13,0,">1 nonsynonymous","I28P C61Y N120D K128L",4
"lib1","SARS-CoV-2","CCAGCACTCATCTTAC",2,0.59,NA,NA,NA,NA,NA,NA,"stop","R73E T85* C102N P161L",4
"lib1","SARS-CoV-2","CCAGCAGAACTCACCA",3,0,NA,NA,NA,NA,NA,NA,"stop","N30K N120A K128L G174*",4
"lib1","SARS-CoV-2","CCAGCAGAATCTGTGG",3,7.63,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N4K A67R K128L",3
"lib1","SARS-CoV-2","CCAGCAGACACATGCG",1,60.42,8.91,-1.85,0.07,2.78,1.11,0,">1 nonsynonymous","Y119L S164F",2
"lib1","SARS-CoV-2","CCAGCATAAAAATGAT",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L F47G Q84V K94N",4
"lib1","SARS-CoV-2","CCAGCATAATTAACTT",4,113.93,10.75,-0.01,0.05,2.91,1.03,0,">1 nonsynonymous","R16T P149Y",2
"lib1","SARS-CoV-2","CCAGCATATACAATTC",5,40.67,6,-4.76,2,3,1.08,0,">1 nonsynonymous","V37K P82Y K94A F134P G174A",5
"lib1","SARS-CoV-2","CCAGCATGGAAGTGGT",5,77.01,10.66,-0.11,0.13,2.85,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCAGCATGGGCGCCAG",4,33.72,6.44,-4.32,0.63,1.5,1.23,0.05,">1 nonsynonymous","N110R P133L F156T R179I P197C",5
"lib1","SARS-CoV-2","CCAGCCAACAAAAACG",8,1096.66,10.17,-0.6,0.03,2.94,1.01,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","CCAGCCACCTCAAGCT",3,97.83,10.46,-0.3,0.06,2.86,1.07,0,">1 nonsynonymous","K87V S200H",2
"lib1","SARS-CoV-2","CCAGCCCACGAAAAAT",1,18.21,7.35,-3.42,0.41,1.5,1,0.04,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","CCAGCCCACTCGCCTA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A N92T C158Y",3
"lib1","SARS-CoV-2","CCAGCCCATTATGGCG",1,28.52,10.71,-0.06,0.06,2.96,1,0,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","CCAGCCCGATTGAAAT",1,8.05,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6T T55N I104T Y121R",4
"lib1","SARS-CoV-2","CCAGCCCTCCACCGAC",2,10.44,6.46,-4.3,0.69,1.5,1.03,0.03,">1 nonsynonymous","N13V Y119R T148L G155M",4
"lib1","SARS-CoV-2","CCAGCCCTCTTACGCT",4,16.06,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","S29N V52Q I88S K128T S147H",5
"lib1","SARS-CoV-2","CCAGCCCTGATGTCAT",3,60.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I V103F",2
"lib1","SARS-CoV-2","CCAGCCCTGGCCTAAA",11,130.15,6,-4.76,1.85,1.5,1.19,0.01,">1 nonsynonymous","Q168P P177K",2
"lib1","SARS-CoV-2","CCAGCCGTCATTTATA",7,113.56,9.86,-0.9,0.04,2.83,1.04,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","CCAGCGAATTCAATCG",6,86.22,10.67,-0.09,0.05,2.94,1.02,0,">1 nonsynonymous","I2M N151I",2
"lib1","SARS-CoV-2","CCAGCGACAACACAAC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","F62S P82G K87V L95*",4
"lib1","SARS-CoV-2","CCAGCGACAGGGAAGG",3,37.8,6.33,-4.43,0.9,1.5,1.22,0.04,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","CCAGCGACAGTTAAAC",6,3.79,NA,NA,NA,NA,NA,NA,"stop","W23S S43L S69* Q168L",4
"lib1","SARS-CoV-2","CCAGCGACCGCGGAAT",2,54.44,10.62,-0.15,0.08,2.81,1.04,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","CCAGCGCACTCAGGAT",8,125.56,8.21,-2.55,0.11,2.55,1.08,0.01,"1 nonsynonymous","G146P",1
"lib1","SARS-CoV-2","CCAGCGCGTCTATGGT",1,43.64,10.31,-0.45,0.06,2.87,1,0,">1 nonsynonymous","W106F S129R",2
"lib1","SARS-CoV-2","CCAGCGGAATTGCAAG",1,5.4,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I88M L162P",2
"lib1","SARS-CoV-2","CCAGCGTATTCTAGGC",5,93.63,10.15,-0.61,0.04,2.84,1.01,0,">1 nonsynonymous","N64T Q144L",2
"lib1","SARS-CoV-2","CCAGCGTTCAAATAGT",2,27.05,9.57,-1.2,0.21,1.5,1.08,0.02,">1 nonsynonymous","R78L A105Y F134L T201R",4
"lib1","SARS-CoV-2","CCAGCGTTTGTCAACG",8,48.68,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y93H K132Q G146F",3
"lib1","SARS-CoV-2","CCAGCTAACCATAAAC",4,45.33,10.37,-0.4,0.05,2.93,1.04,0,">1 nonsynonymous","I2S K128C G174A",3
"lib1","SARS-CoV-2","CCAGCTAAGATTAACC",3,31.83,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89T G101C T140N P169T",4
"lib1","SARS-CoV-2","CCAGCTACCATATTTG",6,100.35,10.65,-0.12,0.06,2.88,1.07,0,"1 nonsynonymous","Y66L",1
"lib1","SARS-CoV-2","CCAGCTACGCGATTCT",4,43.87,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","P7L Y91P",2
"lib1","SARS-CoV-2","CCAGCTAGAAGTACCG",7,34.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P96R S139W",2
"lib1","SARS-CoV-2","CCAGCTATCACCCTAG",4,17.29,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","A18T A42L Y93F T100F N107T P161H",6
"lib1","SARS-CoV-2","CCAGCTATCACGGGCA",4,22.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A81D G86T N107V P161T",4
"lib1","SARS-CoV-2","CCAGCTCAGCGACTTG",14,4.51,NA,NA,NA,NA,NA,NA,"stop","L95M G116*",2
"lib1","SARS-CoV-2","CCAGCTCCCCGGCTTC",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R S19L Y93S T148K",4
"lib1","SARS-CoV-2","CCAGCTGGTAGTGCTA",6,73.66,10.16,-0.6,0.07,2.19,1,0,"1 nonsynonymous","E76Y",1
"lib1","SARS-CoV-2","CCAGCTGGTGATTATG",2,12.98,10.7,-0.07,0.08,2.84,1.15,0,"1 nonsynonymous","Y178H",1
"lib1","SARS-CoV-2","CCAGCTGTACAGACTG",1,23.04,10.44,-0.32,0.12,2.82,1.02,0.01,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","CCAGCTTACCACTCTC",2,32.05,9.9,-0.87,0.1,1.86,1.18,0,">1 nonsynonymous","I72T D90S",2
"lib1","SARS-CoV-2","CCAGCTTACTCCAAGA",9,165.5,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5Q F167P A192V",3
"lib1","SARS-CoV-2","CCAGCTTCATATTACG",2,7.39,10.13,-0.63,0.17,2.53,1,0.01,">1 nonsynonymous","N4T T55I D90F",3
"lib1","SARS-CoV-2","CCAGCTTGAGTATCTA",5,67.88,10.73,-0.04,0.06,2.93,1.04,0,"1 nonsynonymous","K114M",1
"lib1","SARS-CoV-2","CCAGCTTGCGCCAAGT",2,95.51,10.7,-0.06,0.04,2.93,1.04,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","CCAGCTTGTAGGTCTA",3,88.51,10.71,-0.05,0.09,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGCTTTAACATCTA",6,19.79,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L183R",1
"lib1","SARS-CoV-2","CCAGCTTTACTAATCA",5,29.6,9.01,-1.75,0.31,1.6,1.25,0.04,">1 nonsynonymous","A81R Y121V S184I",3
"lib1","SARS-CoV-2","CCAGGAAACCAAAAAT",7,66.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86T N118K C158V P197M",4
"lib1","SARS-CoV-2","CCAGGAAACCAACCAT",6,0.32,NA,NA,NA,NA,NA,NA,"stop","N13C Y21L R27* A42P V103I N109*",6
"lib1","SARS-CoV-2","CCAGGAAAGGTCACAA",1,6.5,10.72,-0.05,0.08,3,1,0,"1 nonsynonymous","D59Y",1
"lib1","SARS-CoV-2","CCAGGAAATTCATCGA",4,34.45,9.68,-1.09,0.19,1.93,1.05,0.02,">1 nonsynonymous","A14P P133F P149S S164R",4
"lib1","SARS-CoV-2","CCAGGAACGAATTCAA",2,49.23,6,-4.76,2,1.5,1.35,0.03,"1 nonsynonymous","D112W",1
"lib1","SARS-CoV-2","CCAGGAACGCTGCAAT",1,29.82,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T63W F70M S139N F167H Y175G",5
"lib1","SARS-CoV-2","CCAGGAAGCTTGTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11G V37A V77L V180S T201*",5
"lib1","SARS-CoV-2","CCAGGAATAAAAATAT",2,41.68,10.31,-0.45,0.07,2.82,1,0,">1 nonsynonymous","P7L K132D",2
"lib1","SARS-CoV-2","CCAGGAATGAGATAAA",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87C A105Y R136L",3
"lib1","SARS-CoV-2","CCAGGACATTAAAACT",2,65.43,10.81,0.04,0.05,2.94,1.02,0,">1 nonsynonymous","P54K S139N",2
"lib1","SARS-CoV-2","CCAGGACGTGTTGTAA",6,41.77,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6G S113M E154C Y159N Y178A",5
"lib1","SARS-CoV-2","CCAGGACTACGACGCT",2,32.36,10.81,0.05,0.11,2.81,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGGACTGTCCCTAA",1,57.07,8.17,-2.6,0.24,1.96,1.14,0.02,">1 nonsynonymous","A42L S113M F160P",3
"lib1","SARS-CoV-2","CCAGGACTTCCCCGAA",2,16.1,9.92,-0.84,0.2,2.4,1.04,0.02,">1 nonsynonymous","A42C N58K Q84L",3
"lib1","SARS-CoV-2","CCAGGAGAAGCTAGGG",2,30.25,10.69,-0.07,0.08,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGGAGAGCAGCACA",2,63.25,9.86,-0.9,0.11,2.31,1.02,0.01,">1 nonsynonymous","C31L P54Q T63G",3
"lib1","SARS-CoV-2","CCAGGAGGAAAAAGGG",2,19.09,10.24,-0.52,0.38,1.5,1.05,0.04,">1 nonsynonymous","Y39I Y91V D98L",3
"lib1","SARS-CoV-2","CCAGGATAAATCCCTA",5,17.84,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","Y50Q S139F T148L V180A A190V",5
"lib1","SARS-CoV-2","CCAGGATATCACAAAC",5,76.49,6.47,-4.29,0.43,1.5,1.17,0.02,">1 nonsynonymous","A145S N157I",2
"lib1","SARS-CoV-2","CCAGGATGCCTGTGCG",1,0.76,NA,NA,NA,NA,NA,NA,"stop","V20L S43* K48F A105D D112V R136P",6
"lib1","SARS-CoV-2","CCAGGATTCAACACCA",9,0.94,NA,NA,NA,NA,NA,NA,"stop","L60Y R136M T148L Y175*",4
"lib1","SARS-CoV-2","CCAGGCAGATAACATA",2,33.19,10.95,0.18,0.09,2.89,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGGCATCAACGTAG",11,107.3,6,-4.76,2,2.75,1.14,0,">1 nonsynonymous","W23S C31I S41M",3
"lib1","SARS-CoV-2","CCAGGCATTCTAAAGA",4,33.39,10.64,-0.13,0.06,2.95,1.03,0,"1 nonsynonymous","A22E",1
"lib1","SARS-CoV-2","CCAGGCATTGACATGC",4,0,NA,NA,NA,NA,NA,NA,"stop","V71* A190F",2
"lib1","SARS-CoV-2","CCAGGCCCGATGCAAT",2,61.11,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F8I K48I K56I T63R K87I D112H",6
"lib1","SARS-CoV-2","CCAGGCGACAGGGGGA",1,31.71,10.76,0,0.06,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGGCGCGATCCAAA",2,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","CCAGGCGGGTTACGGA",2,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W E76S W106F",3
"lib1","SARS-CoV-2","CCAGGCGTATTGAATG",12,89.88,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12I W106G R124C P149E Y159V V173A",6
"lib1","SARS-CoV-2","CCAGGCTACCCATGAG",2,9.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D98E S139P P169T V181D",4
"lib1","SARS-CoV-2","CCAGGGACAATTCTAA",3,58.09,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","K128A P177L",2
"lib1","SARS-CoV-2","CCAGGGACAGTTGATA",2,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N N13P S129W I142M",4
"lib1","SARS-CoV-2","CCAGGGACCTCGCTAT",3,24.44,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F8A F70N D97F P133L",4
"lib1","SARS-CoV-2","CCAGGGACGGATCCGT",2,44.49,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G86M C158Q",2
"lib1","SARS-CoV-2","CCAGGGAGTTCCCACT",3,47.5,10.17,-0.6,0.1,2.7,1.04,0,">1 nonsynonymous","A14N V37Y F44V T201L",4
"lib1","SARS-CoV-2","CCAGGGATACCATATT",1,1542.96,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","G51N N58S P161R",3
"lib1","SARS-CoV-2","CCAGGGATCAAGCACC",7,47.68,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10R T55I N92V S108H",4
"lib1","SARS-CoV-2","CCAGGGCGTGACTTAA",1,54.47,8.1,-2.67,0.21,1.77,1.18,0.02,"1 nonsynonymous","S139P",1
"lib1","SARS-CoV-2","CCAGGGGTTGCACTAT",1,29.06,8.03,-2.73,0.31,1.77,1.14,0.03,">1 nonsynonymous","G9E A22N Y35S F44N A89P N130F A145S S184W",8
"lib1","SARS-CoV-2","CCAGGGTCGGTGTTTA",7,66.8,6.79,-3.98,0.31,1.5,1.16,0.02,">1 nonsynonymous","S69R Y121K T201R",3
"lib1","SARS-CoV-2","CCAGGGTTTCCATCCT",6,543.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V20K T100V G155Y F185N",4
"lib1","SARS-CoV-2","CCAGGTAAGGCAGTAA",7,116.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34C I72C P177C",3
"lib1","SARS-CoV-2","CCAGGTATAAGGAGTA",3,48.53,8.75,-2.01,0.17,2.19,1.12,0.01,">1 nonsynonymous","G117P P133A P149T",3
"lib1","SARS-CoV-2","CCAGGTCAAGCTGCAC",1,26.79,10.31,-0.45,0.08,2.86,1,0,">1 nonsynonymous","V71T N110Q",2
"lib1","SARS-CoV-2","CCAGGTCCAGCCCCCT",7,4.05,NA,NA,NA,NA,NA,NA,"stop","N4I R27* A33C Y91D F99D A105L S113W S129R G146W F156Q",10
"lib1","SARS-CoV-2","CCAGGTCCCTAATGTT",6,25.16,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","G86P",1
"lib1","SARS-CoV-2","CCAGGTCGAGCTAAAC",2,69.65,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R25C A81P I142M G174R Y178G T201M",6
"lib1","SARS-CoV-2","CCAGGTCGGACCTTAA",2,21.73,6,-4.76,1.98,1.5,1.23,0.07,">1 nonsynonymous","W106D N151P P197S",3
"lib1","SARS-CoV-2","CCAGGTGAGCCTGTTG",2,25.88,10.59,-0.17,0.03,2.95,1.01,0,">1 nonsynonymous","C61E V71I K87H",3
"lib1","SARS-CoV-2","CCAGGTGCTGTGCCAG",6,44.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44V K94C N107T S113V E141R",5
"lib1","SARS-CoV-2","CCAGGTTGCAATATGC",1,106.32,9.22,-1.55,0.06,2.86,1.11,0,">1 nonsynonymous","D98E A145L",2
"lib1","SARS-CoV-2","CCAGGTTGGAATTTAG",5,60.15,9.52,-1.25,0.12,2.43,1.12,0.01,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","CCAGTAAAAATGAGGG",2,14.95,7.96,-2.81,0.32,1.5,1.07,0.04,">1 nonsynonymous","N118T Y165L",2
"lib1","SARS-CoV-2","CCAGTAAAACCTGCAA",3,109.03,10.72,-0.04,0.07,2.88,1.1,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CCAGTAAACTCAACAG",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K G51R L60R Q176K",4
"lib1","SARS-CoV-2","CCAGTAAATGCCAGCA",2,11.02,6.23,-4.53,0.56,1.5,1.2,0.02,">1 nonsynonymous","C49Y T55I T85R P149H",4
"lib1","SARS-CoV-2","CCAGTAACCAGAATGT",2,18.15,10.61,-0.15,0.07,2.89,1,0,">1 nonsynonymous","A18K D90N",2
"lib1","SARS-CoV-2","CCAGTAACCGAAAATA",1,9.9,8.39,-2.37,0.17,1.63,1.12,0.02,">1 nonsynonymous","N1T T85D P96N T148L G174M",5
"lib1","SARS-CoV-2","CCAGTAAGGTAAATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y21* D90R",2
"lib1","SARS-CoV-2","CCAGTAATCAATACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","N4I N58A W106*",3
"lib1","SARS-CoV-2","CCAGTACACTCTAATA",4,33.17,6.52,-4.24,0.6,1.5,1.12,0.05,">1 nonsynonymous","R27K C61H N92I C102R N120I",5
"lib1","SARS-CoV-2","CCAGTACAGCCTCGCA",2,18.46,9.29,-1.47,0.3,2.01,1.24,0.03,">1 nonsynonymous","K56L N64H G83C L95M A105T",5
"lib1","SARS-CoV-2","CCAGTACATCGAGACT",3,27.87,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N30Q F44V I80S V153C",4
"lib1","SARS-CoV-2","CCAGTACATTACTAGC",1,14,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9A F70M Q79R P82R K87S S184I",6
"lib1","SARS-CoV-2","CCAGTACCGAAAGTCC",1,1.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","CCAGTACGTACTAAAT",1,23.61,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T3H E10I N40M D98E A145F Q163G",6
"lib1","SARS-CoV-2","CCAGTACTGAAATAAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","P7S A33S T55N C61* K94W",5
"lib1","SARS-CoV-2","CCAGTACTGCATTAAC",10,98.28,9.9,-0.87,0.13,1.98,1.06,0.01,"1 nonsynonymous","P96V",1
"lib1","SARS-CoV-2","CCAGTACTTAATTAAG",2,38.85,8.53,-2.23,0.12,3,1.05,0.01,"1 nonsynonymous","F126G",1
"lib1","SARS-CoV-2","CCAGTAGTAATGTCGT",3,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96V Y123L T201H",3
"lib1","SARS-CoV-2","CCAGTAGTTGAAAAAA",3,7.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17D S41H G51Y I104D N107S F126S",6
"lib1","SARS-CoV-2","CCAGTATAATGAAGTA",1,26.29,10.56,-0.2,0.07,2.92,1.01,0,">1 nonsynonymous","I104F S129I F160L",3
"lib1","SARS-CoV-2","CCAGTATACAGAAAAG",2,8.61,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A81Y T100F S129T C158T",4
"lib1","SARS-CoV-2","CCAGTATGTCAGCAGG",2,30.09,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F62L A81T P177L",3
"lib1","SARS-CoV-2","CCAGTATTATTAGGGA",3,5.9,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I72D A81K R136K",3
"lib1","SARS-CoV-2","CCAGTATTGTCTACGT",19,66.4,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","F47E A67D W106Y E135W",4
"lib1","SARS-CoV-2","CCAGTCAAATTATGCC",6,1.04,NA,NA,NA,NA,NA,NA,"stop","N1M E141*",2
"lib1","SARS-CoV-2","CCAGTCACTCAAGATG",1,14.73,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V52A P82Y K114T V173S",4
"lib1","SARS-CoV-2","CCAGTCAGAACGTATG",3,105.24,9.43,-1.33,0.09,2.66,1.09,0,">1 nonsynonymous","P7M L131M F156L",3
"lib1","SARS-CoV-2","CCAGTCAGATAACGCC",4,50.4,9.13,-1.63,0.21,1.5,1.1,0.02,"1 nonsynonymous","L183T",1
"lib1","SARS-CoV-2","CCAGTCAGGGCATAGC",1,55.84,8.86,-1.9,0.11,1.99,1.11,0,">1 nonsynonymous","Y91L Y123E",2
"lib1","SARS-CoV-2","CCAGTCATATTTATTA",1,9.55,6,-4.76,2,3,1.27,0.02,"1 nonsynonymous","R124F",1
"lib1","SARS-CoV-2","CCAGTCCACTGTCGTA",5,62.36,10.76,-0.01,0.06,2.94,1.03,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","CCAGTCCGAGACAGCC",2,35.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G116V Y159G",2
"lib1","SARS-CoV-2","CCAGTCCGATGATCCC",4,36.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35M T46K P82A L95Y P197H",5
"lib1","SARS-CoV-2","CCAGTCCTCAGATTAC",5,91.77,10.81,0.04,0.08,2.89,1.05,0,"1 nonsynonymous","Y39T",1
"lib1","SARS-CoV-2","CCAGTCTCAATTCTTA",2,60.26,8.28,-2.48,0.25,1.53,1.22,0.02,">1 nonsynonymous","D34A S113C",2
"lib1","SARS-CoV-2","CCAGTCTCACAAAGCC",2,31.86,8.14,-2.63,0.26,1.72,1.13,0.03,">1 nonsynonymous","Q79S N157A",2
"lib1","SARS-CoV-2","CCAGTCTCCGATATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* G155E",2
"lib1","SARS-CoV-2","CCAGTCTCTCCATATA",3,82.93,10.68,-0.08,0.07,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CCAGTCTCTCGTCATA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","G9* T46A N58* P149T",4
"lib1","SARS-CoV-2","CCAGTCTTCTCACCTT",2,33.06,10.74,-0.03,0.05,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGTCTTGCCGACAG",1,14.04,10.69,-0.07,0.13,2.9,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCAGTCTTTCCACAAA",6,86.62,10.21,-0.55,0.08,2.76,1.06,0,">1 nonsynonymous","E10G N58S T100C",3
"lib1","SARS-CoV-2","CCAGTGAATTGCATTG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","V77R Y91R D112*",3
"lib1","SARS-CoV-2","CCAGTGACCAAAAACT",4,272.76,7.83,-2.94,0.15,1.5,1.1,0.01,">1 nonsynonymous","K56S Y119W Q176L H189Q",4
"lib1","SARS-CoV-2","CCAGTGATAACAACGC",2,60.12,10.75,-0.01,0.06,2.82,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCAGTGCAAATGGCAT",4,71.64,9.54,-1.23,0.14,1.93,1.12,0.01,">1 nonsynonymous","F62V Y91C T140W",3
"lib1","SARS-CoV-2","CCAGTGCACTCATCGA",1,9.94,9.61,-1.15,0.14,1.97,1.03,0.01,">1 nonsynonymous","T100S K128I G152C P191N",4
"lib1","SARS-CoV-2","CCAGTGCCTTCCAGTA",7,1.74,NA,NA,NA,NA,NA,NA,"stop","T3I F44L T201*",3
"lib1","SARS-CoV-2","CCAGTGCCTTTGCGGT",6,0,NA,NA,NA,NA,NA,NA,"stop","W23* G86F S113* Y121K",4
"lib1","SARS-CoV-2","CCAGTGCTCCCTATAA",1,40.63,10.83,0.06,0.06,2.86,1.08,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","CCAGTGGATCCTTATT",2,1.61,NA,NA,NA,NA,NA,NA,"stop","N4I D75V Y143*",3
"lib1","SARS-CoV-2","CCAGTGTACATATGGA",15,42.46,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N1K E10S G51F Y93T",4
"lib1","SARS-CoV-2","CCAGTGTGTGTGCAAA",1,72.02,10.88,0.12,0.07,2.89,1.07,0,"1 nonsynonymous","N171V",1
"lib1","SARS-CoV-2","CCAGTGTTGCCGAACC",2,45.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36M C49E H189Y",3
"lib1","SARS-CoV-2","CCAGTTAAATACACTT",2,74.1,10.09,-0.68,0.09,2.6,1,0,">1 nonsynonymous","Y35E S43R K48M L187T",4
"lib1","SARS-CoV-2","CCAGTTAACATCACAG",4,26.94,6,-4.76,2,2.68,1.2,0,">1 nonsynonymous","F12Y W23F T100D",3
"lib1","SARS-CoV-2","CCAGTTAAGACAACTA",5,30.52,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","A14N Y39I C49H P96Q",4
"lib1","SARS-CoV-2","CCAGTTAAGGATGCCT",3,40.38,10.69,-0.07,0.07,2.88,1.08,0,">1 nonsynonymous","T46H K114R",2
"lib1","SARS-CoV-2","CCAGTTACAAATGACT",3,17.65,6.49,-4.28,0.84,1.5,1.21,0.06,">1 nonsynonymous","F17K D59V D90H A105Y N118L",5
"lib1","SARS-CoV-2","CCAGTTACAACATAAC",9,98.75,9.97,-0.8,0.11,2.14,1.06,0,">1 nonsynonymous","F8S S200L",2
"lib1","SARS-CoV-2","CCAGTTACACGACAAC",1,0.28,NA,NA,NA,NA,NA,NA,"stop","N4G Y35* T46Y G51K I88K",5
"lib1","SARS-CoV-2","CCAGTTCATTTCCATA",3,49.94,11.01,0.24,0.09,2.88,1.04,0,">1 nonsynonymous","Y123L Q168H",2
"lib1","SARS-CoV-2","CCAGTTCCTATTCAAA",2,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117L L162Y",2
"lib1","SARS-CoV-2","CCAGTTCTATCTAAAA",4,50.95,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2D G86M N151L G172K",4
"lib1","SARS-CoV-2","CCAGTTCTCTGCGTAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","F8* G116L Y165S",3
"lib1","SARS-CoV-2","CCAGTTCTTCTGTGCG",1,17.6,8.02,-2.74,0.22,1.86,1.08,0.02,">1 nonsynonymous","G146R N157F",2
"lib1","SARS-CoV-2","CCAGTTGACACCCGTA",8,56.44,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","I88N R124K C158R",3
"lib1","SARS-CoV-2","CCAGTTGATGCAGGCA",9,0.2,NA,NA,NA,NA,NA,NA,"stop","Y35* L60V G83I L122W",4
"lib1","SARS-CoV-2","CCAGTTGCTGCCAAAA",4,53.46,10.12,-0.64,0.04,2.72,1.05,0,">1 nonsynonymous","P7G T15V Q84K",3
"lib1","SARS-CoV-2","CCAGTTGTGAAAATCG",8,187.5,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48S K87R V103M I142S S147A",5
"lib1","SARS-CoV-2","CCAGTTGTTGTTAACA",4,38.5,7.31,-3.45,0.34,1.5,1.2,0.04,">1 nonsynonymous","I138A V180F",2
"lib1","SARS-CoV-2","CCAGTTTAGGAAATTT",3,25.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25V S129D",2
"lib1","SARS-CoV-2","CCAGTTTTGCAGTATA",5,91.57,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4H V37S D97A R136W G146Y",5
"lib1","SARS-CoV-2","CCAGTTTTTAAATAAA",1,3.16,NA,NA,NA,NA,NA,NA,"stop","T15I Y91S S113* K198D",4
"lib1","SARS-CoV-2","CCAGTTTTTTACAGCC",4,87.29,10.15,-0.61,0.11,2.08,1.07,0.01,"1 nonsynonymous","V181A",1
"lib1","SARS-CoV-2","CCATAAAAAACGGATC",3,51.47,10.66,-0.1,0.04,2.87,1.04,0,">1 nonsynonymous","S41N S45R",2
"lib1","SARS-CoV-2","CCATAAAAAAGGAGAA",4,144.04,10.76,0,0.04,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CCATAAAAACAAACAC",4,69.65,10.79,0.03,0.03,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATAAAAACAATCCT",5,114.19,8.49,-2.27,0.11,2.87,1.06,0,">1 nonsynonymous","I2N T170I",2
"lib1","SARS-CoV-2","CCATAAAACAAATAAA",1,35.72,9.42,-1.34,0.11,1.93,1.05,0,">1 nonsynonymous","E10S L162C K199N",3
"lib1","SARS-CoV-2","CCATAAAACAATACCA",3,16.81,7.2,-3.57,0.21,1.73,1.05,0.01,">1 nonsynonymous","C150M F156S",2
"lib1","SARS-CoV-2","CCATAAAACTACCCGC",3,42.17,9.67,-1.09,0.12,1.96,1.07,0.01,">1 nonsynonymous","N107K L122S S139D",3
"lib1","SARS-CoV-2","CCATAAAAGAGTTGGT",3,6.27,10.72,-0.04,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CCATAAAAGTGAGATA",6,78.02,7.85,-2.91,0.27,1.5,1.12,0.02,"1 nonsynonymous","G101C",1
"lib1","SARS-CoV-2","CCATAAACACCGCGCT",2,9.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A81I K114A L183S",3
"lib1","SARS-CoV-2","CCATAAACATTACTAC",8,78.19,6.11,-4.65,0.78,1.5,1.12,0.02,">1 nonsynonymous","G51N F99K G116D",3
"lib1","SARS-CoV-2","CCATAAACCGCAGTAC",4,15.75,6.08,-4.68,0.89,1.5,1.19,0.03,">1 nonsynonymous","F17G D137Q G155R",3
"lib1","SARS-CoV-2","CCATAAACCGCTACGT",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T C61D K94R R124D",4
"lib1","SARS-CoV-2","CCATAAACCTTTAATC",1,13.32,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","L5R S19I",2
"lib1","SARS-CoV-2","CCATAAACTCTTACAA",2,24.26,10.89,0.13,0.12,2.87,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATAAAGAGCAGAAC",2,38.78,10.42,-0.34,0.06,2.95,1.01,0,">1 nonsynonymous","A42G C61I P149F",3
"lib1","SARS-CoV-2","CCATAAAGAGCAGCGC",1,22.24,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","E10G L95S",2
"lib1","SARS-CoV-2","CCATAAAGATCAATCG",4,65.8,7.49,-3.28,0.38,1.5,1.27,0.03,">1 nonsynonymous","F12I T55I Q176L",3
"lib1","SARS-CoV-2","CCATAAAGCATAAACA",2,12.61,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N64K V71N G172W",3
"lib1","SARS-CoV-2","CCATAAAGCCGGCACG",1,56.05,9.19,-1.57,0.08,2.97,1.04,0,">1 nonsynonymous","T3E C61T Y119P P149Q",4
"lib1","SARS-CoV-2","CCATAAAGCTAAAGCA",4,21.47,9.83,-0.93,0.17,1.83,1,0.02,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","CCATAAAGGCCACAAT",7,57.41,6.03,-4.73,0.73,1.5,1.21,0.01,">1 nonsynonymous","Y93R I138W L162R P197M",4
"lib1","SARS-CoV-2","CCATAAATAAAAACAT",2,59.76,10.89,0.13,0.07,2.93,1.05,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","CCATAAATACACGGAT",3,16.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4T K56S N92V V180M",4
"lib1","SARS-CoV-2","CCATAAATACAGTCCT",4,59.97,10.6,-0.17,0.06,2.84,1.09,0,">1 nonsynonymous","F156W T201N",2
"lib1","SARS-CoV-2","CCATAAATACGGATTA",8,90.57,10.1,-0.67,0.05,2.67,1.02,0,">1 nonsynonymous","P96K L187M",2
"lib1","SARS-CoV-2","CCATAACAAGCTTGCA",4,46,6.03,-4.74,0.94,1.5,1.23,0.01,">1 nonsynonymous","V11I R27L I88S D97K",4
"lib1","SARS-CoV-2","CCATAACACATACGCA",1,44.43,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","T55K F99I N107D R136H G155L",5
"lib1","SARS-CoV-2","CCATAACACGGTTATA",5,61.69,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K94V P133S T140F Y165A N171K",5
"lib1","SARS-CoV-2","CCATAACATACCAAAT",4,216.3,10.79,0.02,0.05,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CCATAACATTGGATAA",4,40,10.16,-0.6,0.12,2.13,1,0,">1 nonsynonymous","S43F P96C",2
"lib1","SARS-CoV-2","CCATAACCCTCTTCTG",1,1,NA,NA,NA,NA,NA,NA,"stop","A81D Q168*",2
"lib1","SARS-CoV-2","CCATAACTCGCCGTAC",4,6.13,NA,NA,NA,NA,NA,NA,"stop","F12P K128*",2
"lib1","SARS-CoV-2","CCATAAGAAACCGTAT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I N24R V77M G116S G146L V180E",6
"lib1","SARS-CoV-2","CCATAAGAACCCCTCG",1,78.04,10.7,-0.07,0.06,2.9,1.04,0,"1 nonsynonymous","A22H",1
"lib1","SARS-CoV-2","CCATAAGACCCTAACA",3,39.45,9.99,-0.78,0.11,1.9,1.06,0,">1 nonsynonymous","D34N A42T V52S",3
"lib1","SARS-CoV-2","CCATAAGAGTGCCCTA",4,52.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I28L Y91G A105V T148L G166I",5
"lib1","SARS-CoV-2","CCATAAGCAGCAAATG",3,0.37,NA,NA,NA,NA,NA,NA,"stop","N1T G9R F44M T63* E141N",5
"lib1","SARS-CoV-2","CCATAAGTGAACATAT",1,40.44,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G9A Y35N G86T D112S",4
"lib1","SARS-CoV-2","CCATAAGTGATTCCCT",6,89.86,6,-4.76,2,2.37,1.1,0,">1 nonsynonymous","P133C E154P G172Q K199N",4
"lib1","SARS-CoV-2","CCATAAGTTAAGAAGG",11,181.5,9.19,-1.58,0.11,2.33,1.16,0,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","CCATAATAAGATAAGA",7,2.4,NA,NA,NA,NA,NA,NA,"stop","D68W I142*",2
"lib1","SARS-CoV-2","CCATAATACAGCCTCG",5,86.36,8.9,-1.86,0.12,2.28,1.19,0.01,">1 nonsynonymous","K48H G83L D98H G174L",4
"lib1","SARS-CoV-2","CCATAATAGTAGGACT",3,17.57,10.73,-0.03,0.04,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATAATATAAATCCT",3,7.34,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13Y S41G G51T N107L K199M",5
"lib1","SARS-CoV-2","CCATAATATCCCATGC",4,44.55,10.18,-0.59,0.07,2.87,1.04,0,">1 nonsynonymous","D34K Y39A C195F",3
"lib1","SARS-CoV-2","CCATAATCAAACAGAA",1,28.31,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F99N A105F",2
"lib1","SARS-CoV-2","CCATAATCACCAATCA",2,30.88,10.16,-0.61,0.06,2.67,1,0,"1 nonsynonymous","R25S",1
"lib1","SARS-CoV-2","CCATAATCACTTTAAA",4,900.8,10.08,-0.68,0.04,2.82,1,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","CCATAATCTAACTATG",6,93.04,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I88M C102M",2
"lib1","SARS-CoV-2","CCATAATGGCTCGCGG",1,12.13,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98I V103E N130F Q176A",4
"lib1","SARS-CoV-2","CCATAATGTACTAAAC",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E N120V",2
"lib1","SARS-CoV-2","CCATAATTAGGTCGGG",5,40.85,6,-4.76,1.31,1.5,1.13,0.02,">1 nonsynonymous","S69V N107H I138P",3
"lib1","SARS-CoV-2","CCATAATTCGTACGCT",1,71.49,10.77,0,0.03,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CCATAATTGAGATACC",2,10.29,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V65L Q79S L95P",3
"lib1","SARS-CoV-2","CCATAATTGGCCATAT",2,25.57,6.21,-4.55,0.43,1.87,1.16,0.01,">1 nonsynonymous","T3Y G101Y",2
"lib1","SARS-CoV-2","CCATAATTTTCAGGTA",6,69.05,10.75,-0.02,0.08,2.84,1.11,0,">1 nonsynonymous","T55Y E76H F160S K198R",4
"lib1","SARS-CoV-2","CCATACAAACGAGACA",6,157.99,10.63,-0.14,0.03,2.87,1.06,0,">1 nonsynonymous","D98N I138Y T201K",3
"lib1","SARS-CoV-2","CCATACAAACTTTCGC",4,48.36,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35T D90F R179T",3
"lib1","SARS-CoV-2","CCATACAAGAATTAAA",1,17.36,6.57,-4.19,0.39,1.5,1.1,0.02,">1 nonsynonymous","P54T D68I F134Y A190E",4
"lib1","SARS-CoV-2","CCATACACGTCACGCA",2,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F D90I S113L",3
"lib1","SARS-CoV-2","CCATACACTTCAAATA",3,17.41,7.66,-3.1,0.21,1.66,1.08,0.01,">1 nonsynonymous","N1Y A145F G155V",3
"lib1","SARS-CoV-2","CCATACAGGCCATAAT",8,57.8,8.36,-2.41,0.35,1.5,1,0.05,">1 nonsynonymous","N24T W106R R136A",3
"lib1","SARS-CoV-2","CCATACAGTTATTAGA",1,8.25,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P54G Y93R H189S",3
"lib1","SARS-CoV-2","CCATACATAACCAGCA",4,131.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","V32E I72T K128L G172N",4
"lib1","SARS-CoV-2","CCATACATGAAATGTT",1,70.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38I F70P N151Q",3
"lib1","SARS-CoV-2","CCATACATGAATGCTT",7,203.57,10.46,-0.31,0.03,2.85,1.02,0,">1 nonsynonymous","A22N D90L",2
"lib1","SARS-CoV-2","CCATACATGGGAAAAC",6,78.01,10.74,-0.02,0.04,2.92,1.03,0,"1 nonsynonymous","D90Q",1
"lib1","SARS-CoV-2","CCATACATGTGTGAAT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","T85* Y91R G101S",3
"lib1","SARS-CoV-2","CCATACCACATACGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93S T100* I138V G172R",4
"lib1","SARS-CoV-2","CCATACCACTCTGATT",6,114.5,10.8,0.03,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATACCCAAAGAGGA",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37N T63R L95Q",4
"lib1","SARS-CoV-2","CCATACCCACCCACTA",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q Y35N C61P G86R Y165F",5
"lib1","SARS-CoV-2","CCATACCCGTTTAGTC",2,11.89,10.74,-0.03,0.11,2.81,1.13,0.01,"1 nonsynonymous","K199H",1
"lib1","SARS-CoV-2","CCATACGACAGCCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87* L122S",2
"lib1","SARS-CoV-2","CCATACGCCCCTGCTG",1,86.17,10.67,-0.1,0.03,2.95,1.01,0,">1 nonsynonymous","L5V K56M T148L",3
"lib1","SARS-CoV-2","CCATACGCGGGACAGT",1,10.13,10.17,-0.6,0.14,2.78,1.13,0.01,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","CCATACTAAACCTGGG",3,6.81,7.77,-3,0.32,1.89,1.01,0.03,">1 nonsynonymous","G9E L131S S139N G155Y",4
"lib1","SARS-CoV-2","CCATACTAACATGCCA",6,55.56,6,-4.76,1.11,1.5,1.14,0.01,">1 nonsynonymous","Y93V Y123L R127H",3
"lib1","SARS-CoV-2","CCATACTAATAAGCAA",2,8.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W C61S P96M S129K C150Y",5
"lib1","SARS-CoV-2","CCATACTCACGAACAC",2,26.34,10.82,0.06,0.07,2.88,1.02,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","CCATACTCCTTAATAC",3,40.38,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F8K N64R L95N F134L R179Q",5
"lib1","SARS-CoV-2","CCATACTCGAATAAAG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","A14I S129H S147N Y159*",4
"lib1","SARS-CoV-2","CCATACTGCCTTTAAC",3,4.57,NA,NA,NA,NA,NA,NA,"stop","P54* D68L Y123*",3
"lib1","SARS-CoV-2","CCATACTGCTCACCCA",13,146.75,10.21,-0.56,0.07,2.67,1.08,0,">1 nonsynonymous","E10T N40S D59A",3
"lib1","SARS-CoV-2","CCATACTGGAATACTT",4,75.19,10.22,-0.54,0.07,2.92,1,0,">1 nonsynonymous","K26Q Y121I",2
"lib1","SARS-CoV-2","CCATAGAACAATACAT",3,55.47,9.76,-1.01,0.11,2.04,1.04,0.01,">1 nonsynonymous","S29F S53W D90L",3
"lib1","SARS-CoV-2","CCATAGAAGCCCTTTA",4,49.1,10.74,-0.02,0.09,2.87,1.13,0,">1 nonsynonymous","R27L L125I",2
"lib1","SARS-CoV-2","CCATAGAATTAGCTTT",12,75.27,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","T46C V115A N157K P161Q",4
"lib1","SARS-CoV-2","CCATAGACCAAATGTG",1,16.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G152L F185N P197W",3
"lib1","SARS-CoV-2","CCATAGATCTACAACC",2,0.61,NA,NA,NA,NA,NA,NA,"stop","R27* V77S",2
"lib1","SARS-CoV-2","CCATAGATTATTCGCT",10,65.01,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P96K D112V F167W",3
"lib1","SARS-CoV-2","CCATAGCCTGACATCT",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F160Y V181S",2
"lib1","SARS-CoV-2","CCATAGGAGTACGATA",5,2.21,NA,NA,NA,NA,NA,NA,"stop","L5S G101D N107W E186*",4
"lib1","SARS-CoV-2","CCATAGGCCATACGTT",8,86.13,10.36,-0.4,0.05,2.95,1,0,">1 nonsynonymous","N1H K26A T63D",3
"lib1","SARS-CoV-2","CCATAGGGGCTTCAAA",3,11.61,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T3W C102I W106L",3
"lib1","SARS-CoV-2","CCATAGTAAATCTTGA",2,18.76,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V11A G146H C150T",3
"lib1","SARS-CoV-2","CCATAGTATATACGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5R P82* Y175R",3
"lib1","SARS-CoV-2","CCATAGTATCAAATCT",2,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A N58L Y93K N120V T170R",5
"lib1","SARS-CoV-2","CCATAGTTCGGGACCA",2,6.58,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","K87E W106C P161S",3
"lib1","SARS-CoV-2","CCATATAAACGACCCT",1,72.01,10.71,-0.06,0.07,2.94,1.05,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","CCATATAAATAATAGA",2,38.41,10.77,0,0.02,2.88,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATATAACATATACT",1,43.07,6.63,-4.14,0.71,1.5,1.16,0.06,">1 nonsynonymous","R27A I88F G101H",3
"lib1","SARS-CoV-2","CCATATAATCGATGTC",5,58.34,10.89,0.13,0.08,2.87,1.02,0,">1 nonsynonymous","T63G Q168W",2
"lib1","SARS-CoV-2","CCATATACATTTAACC",2,32.4,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D68K G83S G116F R124A",4
"lib1","SARS-CoV-2","CCATATACTCGGTCAC",5,51.1,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","F12C A89M K114N N120A F160I",5
"lib1","SARS-CoV-2","CCATATAGACTATCGA",10,4.65,NA,NA,NA,NA,NA,NA,"stop","G86S Y178*",2
"lib1","SARS-CoV-2","CCATATAGGTTCACTT",3,56.99,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y50D C61D V71E S139R E154F Q168N",6
"lib1","SARS-CoV-2","CCATATATCATTCTAA",3,72.18,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37K S43I G51A G74I V103L R127S S139W",7
"lib1","SARS-CoV-2","CCATATCAAACTTGAA",3,104.71,10.7,-0.06,0.05,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATATCAAGTCACAG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S R27K L95V L131T G174R",5
"lib1","SARS-CoV-2","CCATATCACCATAAAT",2,5.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95D L122C",2
"lib1","SARS-CoV-2","CCATATCCCCCCTCAA",1,32.1,9.85,-0.92,0.14,2.21,1,0.01,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","CCATATCGAATGCCCG",5,0.47,NA,NA,NA,NA,NA,NA,"stop","L38* G101*",2
"lib1","SARS-CoV-2","CCATATCGCTGCCTGC",5,29.9,8.69,-2.08,0.2,1.5,1.12,0.01,">1 nonsynonymous","A22R A89N E141I",3
"lib1","SARS-CoV-2","CCATATCGGTTCTCAT",3,60.22,8.53,-2.24,0.12,2.69,1.01,0.01,">1 nonsynonymous","D97M Y143A",2
"lib1","SARS-CoV-2","CCATATCGTACAGAAA",2,28.09,10.69,-0.08,0.08,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATATCTACCCATTT",1,32.84,8.06,-2.7,0.38,1.52,1.2,0.04,">1 nonsynonymous","T15P K87V G166R V173S",4
"lib1","SARS-CoV-2","CCATATCTCATATTGT",4,26.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T15L D112K Y119C",3
"lib1","SARS-CoV-2","CCATATCTTATTACCA",2,33.45,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3E V20L A105H",3
"lib1","SARS-CoV-2","CCATATGAATGGTACT",7,151.7,10.76,-0.01,0.06,2.93,1.02,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CCATATGAATTTTATT",3,41.12,6,-4.76,1.68,1.5,1.15,0.01,">1 nonsynonymous","S45R G86L S113W",3
"lib1","SARS-CoV-2","CCATATGACTTTTGCA",6,142.38,10.43,-0.33,0.04,2.88,1.02,0,">1 nonsynonymous","S45Y K128P",2
"lib1","SARS-CoV-2","CCATATGAGAGACTTC",7,2.53,NA,NA,NA,NA,NA,NA,"stop","D68* Y91R Y175* S184N",4
"lib1","SARS-CoV-2","CCATATGATCCATTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S19W R27* T46R R78A T170P R179T",6
"lib1","SARS-CoV-2","CCATATGCACACAGAC",8,38.45,10.83,0.06,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATATGCAGTAGCTA",4,26.18,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","F8Q V32E Y50T C61H E76S Q84F L95S C102W C158N R179L",10
"lib1","SARS-CoV-2","CCATATGTCATATGGT",1,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R I28R A81T",3
"lib1","SARS-CoV-2","CCATATGTCATGAAAG",1,15.43,9.97,-0.79,0.19,2.57,1.01,0.01,">1 nonsynonymous","K87T W106S",2
"lib1","SARS-CoV-2","CCATATGTGCCTATAA",2,87.91,9.29,-1.48,0.16,1.58,1.2,0.01,">1 nonsynonymous","G9R S36I E135K",3
"lib1","SARS-CoV-2","CCATATTAACGAATTT",4,26.05,6,-4.76,1.22,3,1.19,0.01,">1 nonsynonymous","T85K N92V",2
"lib1","SARS-CoV-2","CCATATTAGGTTAGGT",4,87.59,7.11,-3.66,0.27,1.5,1.11,0.02,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","CCATATTATTAAAATC",1,8.33,10.02,-0.75,0.13,2.88,1,0.01,">1 nonsynonymous","P54N Y121L G196D",3
"lib1","SARS-CoV-2","CCATATTCCTCAACGA",1,18.95,10.68,-0.08,0.1,2.83,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCATATTGCGGGGTTA",2,43.48,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6W V20W F62D A89N S113L C158W",6
"lib1","SARS-CoV-2","CCATATTTATAATATA",16,172.55,6.14,-4.63,0.56,1.5,1.19,0.01,">1 nonsynonymous","C6I F12I S29Q N40M F160R G166R",6
"lib1","SARS-CoV-2","CCATCAAAAAAGTGCA",3,57.97,9.99,-0.77,0.09,2.12,1.02,0,">1 nonsynonymous","V77K L122A",2
"lib1","SARS-CoV-2","CCATCAAATTCCCAAG",2,13.34,10.32,-0.45,0.16,2.86,1,0.02,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","CCATCAAGCACTCATA",3,126.59,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6Y I28R N92R F160G",4
"lib1","SARS-CoV-2","CCATCAATCAACCTAA",2,25.26,10.53,-0.24,0.07,2.96,1.02,0,"1 nonsynonymous","N13H",1
"lib1","SARS-CoV-2","CCATCAATCACCAAAA",9,107.12,10.23,-0.54,0.05,2.78,1,0,"1 nonsynonymous","R136W",1
"lib1","SARS-CoV-2","CCATCAATGATCTCAG",2,0.31,NA,NA,NA,NA,NA,NA,"stop","R16N V37* C49L G117L P169G",5
"lib1","SARS-CoV-2","CCATCAATGCATGAGG",1,41.98,8.74,-2.03,0.06,2.66,1.13,0,">1 nonsynonymous","E10L G74E",2
"lib1","SARS-CoV-2","CCATCAATTTCCACTG",1,5.31,6,-4.76,2,3,1.03,0,">1 nonsynonymous","R16G Y50L G116T",3
"lib1","SARS-CoV-2","CCATCAATTTTAGCAG",1,40.63,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P54K C61Y Y93S I142L",4
"lib1","SARS-CoV-2","CCATCACATAGCACCG",5,180.99,8.1,-2.66,0.15,1.8,1.12,0.01,">1 nonsynonymous","A33P C61E A81H G152N G166I",5
"lib1","SARS-CoV-2","CCATCACCACTTACGG",3,37.8,10.7,-0.06,0.1,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATCACCCACTTCCA",7,82,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N64S F126T Q144S F167N",4
"lib1","SARS-CoV-2","CCATCACCTCAGATAA",2,63.49,9.19,-1.57,0.1,2.41,1.15,0,">1 nonsynonymous","K114G P149H F160G",3
"lib1","SARS-CoV-2","CCATCACGAATGGATG",1,24.07,10.67,-0.09,0.1,2.75,1.2,0,">1 nonsynonymous","N110V S129Q",2
"lib1","SARS-CoV-2","CCATCACGCCCACCCT",3,44.68,9.96,-0.8,0.13,1.91,1.02,0.01,">1 nonsynonymous","F12L Y39T T46W G83F K128G N151S",6
"lib1","SARS-CoV-2","CCATCACGCTGATGGC",4,98.33,10.7,-0.06,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATCAGGTGTATGGA",8,46.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F62C P96Y Y121G S139C L183M",5
"lib1","SARS-CoV-2","CCATCAGGTTTCACTT",2,48.43,10.38,-0.38,0.08,2.86,1.06,0,">1 nonsynonymous","I2C R27G",2
"lib1","SARS-CoV-2","CCATCATAAAAAACTT",1,63.42,10.5,-0.27,0.05,2.9,1.02,0,"1 nonsynonymous","N58I",1
"lib1","SARS-CoV-2","CCATCATCCCTGCCGA",5,7.61,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15G W23Q S43V I88P Q144R N151K",6
"lib1","SARS-CoV-2","CCATCATCCTCTCACA",3,25.35,7.9,-2.87,0.41,1.5,1.13,0.06,">1 nonsynonymous","A14Y V20S",2
"lib1","SARS-CoV-2","CCATCATTCATAAGGT",2,14.27,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19Y G101N Y175K",3
"lib1","SARS-CoV-2","CCATCCAAAGCTACAT",3,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V N118S C158S T201K",4
"lib1","SARS-CoV-2","CCATCCAACCCAAGTA",5,0.77,NA,NA,NA,NA,NA,NA,"stop","G9* L95H",2
"lib1","SARS-CoV-2","CCATCCAACTCAACGA",4,12.96,NA,NA,NA,NA,NA,NA,"stop","C61* W106L E141R N151R G172T",5
"lib1","SARS-CoV-2","CCATCCAATAATCTCG",5,1.74,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","CCATCCAATGGTACCG",4,82.96,9.89,-0.88,0.11,2.06,1.04,0.01,"1 nonsynonymous","I28N",1
"lib1","SARS-CoV-2","CCATCCACAAAGGGTA",3,18.17,8.26,-2.5,0.12,3,1.01,0,">1 nonsynonymous","G83N I138P Y175N",3
"lib1","SARS-CoV-2","CCATCCAGCTATGGTG",1,9.25,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","W23T C150G",2
"lib1","SARS-CoV-2","CCATCCAGGTTTGAAA",12,177.72,10.23,-0.53,0.07,2.68,1,0,">1 nonsynonymous","G9H F99L",2
"lib1","SARS-CoV-2","CCATCCCAATAGACGG",5,14.8,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50C G83L R124A",3
"lib1","SARS-CoV-2","CCATCCCAGCCGAGAA",1,10.2,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y50C G83T N120P",3
"lib1","SARS-CoV-2","CCATCCCATTACAGTA",7,60.01,10.66,-0.11,0.05,2.96,1,0,">1 nonsynonymous","R16I T85I",2
"lib1","SARS-CoV-2","CCATCCCCTTCACTGA",19,3.81,NA,NA,NA,NA,NA,NA,"stop","D90C T100* K128A",3
"lib1","SARS-CoV-2","CCATCCCTTCTCCATA",8,1.48,NA,NA,NA,NA,NA,NA,"stop","C6* Y39* S45R G86F N120D V173*",6
"lib1","SARS-CoV-2","CCATCCGAAACCCATA",1,25.21,10.08,-0.69,0.14,2.59,1.09,0.01,">1 nonsynonymous","N107P L122N",2
"lib1","SARS-CoV-2","CCATCCGAAACTCTCA",9,27.81,6,-4.76,1.86,1.5,1.21,0.02,">1 nonsynonymous","T15W F44Y G51R D59V P149S Q168A",6
"lib1","SARS-CoV-2","CCATCCGAGGGTCACC",5,2.1,NA,NA,NA,NA,NA,NA,"stop","L95E V103* G155V Y165K",4
"lib1","SARS-CoV-2","CCATCCGCATAATTCA",1,9.46,8.71,-2.05,0.07,2.03,1,0,">1 nonsynonymous","T85R N107I",2
"lib1","SARS-CoV-2","CCATCCGTAGCAAAAA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y F47L T63C D112N T201S",5
"lib1","SARS-CoV-2","CCATCCGTCCAGTCCC",3,78.97,8.82,-1.95,0.16,1.5,1.06,0.01,">1 nonsynonymous","R25E S43E Y50W A89S",4
"lib1","SARS-CoV-2","CCATCCGTTAAATCTA",6,43.98,8.31,-2.45,0.18,1.53,1.2,0.02,">1 nonsynonymous","S36W S45W T148C F156I",4
"lib1","SARS-CoV-2","CCATCCTAGGAATGAC",8,46.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6W T46N V180F L183F",4
"lib1","SARS-CoV-2","CCATCCTAGTTCAAAA",3,58.13,9.32,-1.45,0.09,2.09,1.07,0,">1 nonsynonymous","Y91K G146H",2
"lib1","SARS-CoV-2","CCATCCTATATCGATT",6,112.76,8.87,-1.89,0.2,1.5,1.17,0.01,">1 nonsynonymous","Y35C G51D",2
"lib1","SARS-CoV-2","CCATCCTGATGACTAG",1,26.24,8.77,-1.99,0.07,2.67,1.11,0,">1 nonsynonymous","E10A S41G G117S",3
"lib1","SARS-CoV-2","CCATCCTTAAAAAAAT",2,95.27,9.38,-1.39,0.09,2.86,1.09,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","CCATCCTTGCAAAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63K A81F K87Q K128R",4
"lib1","SARS-CoV-2","CCATCCTTTAAAGTAC",5,51.91,10.5,-0.26,0.05,2.86,1.09,0,">1 nonsynonymous","K87T N109L N151M",3
"lib1","SARS-CoV-2","CCATCGAAAAGATCGG",1,26.06,8.18,-2.58,0.26,1.76,1.06,0.03,">1 nonsynonymous","S113W E141G",2
"lib1","SARS-CoV-2","CCATCGAACTATAATG",2,29.44,10.79,0.02,0.1,2.96,1,0.01,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","CCATCGAAGGAAAAAA",1,0.93,NA,NA,NA,NA,NA,NA,"stop","K26L K87P K199*",3
"lib1","SARS-CoV-2","CCATCGAAGGACGTAT",8,16.94,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","G83F I138P V182P",3
"lib1","SARS-CoV-2","CCATCGAATTTCTTAT",7,195.95,8.74,-2.02,0.08,2.68,1.07,0,">1 nonsynonymous","A18P F126V V173P",3
"lib1","SARS-CoV-2","CCATCGACATAATTCA",2,126.28,10.29,-0.48,0.05,2.92,1,0,">1 nonsynonymous","N151A G174R",2
"lib1","SARS-CoV-2","CCATCGACCCGAGTCC",3,58.67,8.51,-2.26,0.15,1.57,1.14,0.01,">1 nonsynonymous","C6S L38V A105T S129T P149N",5
"lib1","SARS-CoV-2","CCATCGACTAGCACTG",2,70.83,8.66,-2.11,0.09,3,1.05,0,"1 nonsynonymous","F126A",1
"lib1","SARS-CoV-2","CCATCGACTTAAGGTA",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T C61F",2
"lib1","SARS-CoV-2","CCATCGACTTAGGCCA",2,8.27,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A42S I104L Y143Q L162Y",4
"lib1","SARS-CoV-2","CCATCGAGACTCTCTA",4,17.16,10.61,-0.15,0.04,2.97,1,0,">1 nonsynonymous","E135Q F160A C195T K199C",4
"lib1","SARS-CoV-2","CCATCGAGGTCCTAAT",4,84.59,9.08,-1.68,0.07,2.78,1.07,0,">1 nonsynonymous","C61A G117S K132S",3
"lib1","SARS-CoV-2","CCATCGCATTCTCAAT",2,21.79,9.28,-1.48,0.17,2.14,1.17,0.01,">1 nonsynonymous","R136N P149T",2
"lib1","SARS-CoV-2","CCATCGCGACGAATGC",2,61.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V20G V65L G172D",3
"lib1","SARS-CoV-2","CCATCGTAACTTGTTT",4,56.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","E10G R27S V37Q Y119T R136L T148G S184F",7
"lib1","SARS-CoV-2","CCATCGTAGGAATCCT",8,52.65,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","G86D W106V",2
"lib1","SARS-CoV-2","CCATCGTATAACTATA",2,35.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M T85S S108Y",3
"lib1","SARS-CoV-2","CCATCGTCGGCTTAGC",2,19.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R T85N I142D Q163S",4
"lib1","SARS-CoV-2","CCATCGTTTAATTTAC",1,5.14,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G9A N24K N120A V182F",4
"lib1","SARS-CoV-2","CCATCGTTTCTACACC",1,0,NA,NA,NA,NA,NA,NA,"stop","R27L P54Q D98N R136M T148* F167W",6
"lib1","SARS-CoV-2","CCATCTAAACAGTCCC",6,111.44,9.73,-1.03,0.13,1.89,1.11,0.01,">1 nonsynonymous","E10W N30A T46S",3
"lib1","SARS-CoV-2","CCATCTAAAGTAACAC",3,14.19,8.18,-2.59,0.21,1.86,1.08,0.01,">1 nonsynonymous","S41Y G86M Y178H K199M",4
"lib1","SARS-CoV-2","CCATCTAGATCAGTTA",11,39.59,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N1D D98F F167D",3
"lib1","SARS-CoV-2","CCATCTAGCTTAAAAT",2,9.19,10.04,-0.73,0.18,2.14,1.01,0.01,">1 nonsynonymous","S53Q P96V P197Q",3
"lib1","SARS-CoV-2","CCATCTATATATCTTG",7,65.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T46D N58L A67H N110F",4
"lib1","SARS-CoV-2","CCATCTATATTTCTAA",1,13.79,9.9,-0.87,0.22,2.49,1.21,0.02,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","CCATCTATTCCAATGT",21,423.81,10.18,-0.59,0.03,2.83,1,0,">1 nonsynonymous","G9L L60T T100Y",3
"lib1","SARS-CoV-2","CCATCTCAACAGCCAA",1,5.07,6,-4.76,2,3,1.03,0,">1 nonsynonymous","G86S Y93T V182Y",3
"lib1","SARS-CoV-2","CCATCTCCAATCTCCT",2,28.84,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","V103H",1
"lib1","SARS-CoV-2","CCATCTCTCTTGCCAT",4,70.28,9.04,-1.73,0.26,1.5,1,0.03,">1 nonsynonymous","S45P K128L F134E",3
"lib1","SARS-CoV-2","CCATCTCTGACCATTA",1,11.87,10.8,0.03,0.15,2.76,1.09,0.01,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","CCATCTGACTTGGGCG",3,0.11,NA,NA,NA,NA,NA,NA,"stop","C6A S45M Y159* T201K",4
"lib1","SARS-CoV-2","CCATCTGAGCGCTACA",4,36.78,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V32I A89R D137S C158P K199Q",5
"lib1","SARS-CoV-2","CCATCTGCAAGCTAAC",2,48.82,10.26,-0.5,0.07,2.99,1.01,0,">1 nonsynonymous","R27E T100F Q168N",3
"lib1","SARS-CoV-2","CCATCTGCCCTGTAAA",5,43.08,6,-4.76,2,1.5,1.3,0.08,">1 nonsynonymous","S69P I104L",2
"lib1","SARS-CoV-2","CCATCTGGCGAATTAA",4,85.43,9.45,-1.32,0.12,1.85,1.11,0.01,">1 nonsynonymous","P82K T100Y",2
"lib1","SARS-CoV-2","CCATCTTAAGATTCAA",1,18.61,10.09,-0.67,0.13,2.69,1,0.01,">1 nonsynonymous","S41R D90W",2
"lib1","SARS-CoV-2","CCATCTTAGACACAAA",1,26.16,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12K A89E T201M",3
"lib1","SARS-CoV-2","CCATCTTGCATACGCG",2,5.87,7.43,-3.34,0.43,1.5,1,0.05,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","CCATCTTTGCGCAATA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","V37D R136* F156S",3
"lib1","SARS-CoV-2","CCATGAAAATAGGAAG",1,40.37,8.48,-2.29,0.18,2.47,1.13,0.01,">1 nonsynonymous","N1L T55L L122R Y143S N151M",5
"lib1","SARS-CoV-2","CCATGAAAATGATTTT",1,23.45,10.56,-0.21,0.12,2.81,1.12,0.01,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","CCATGAAATACCAACT",7,141.42,10.78,0.01,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATGAAATTAAAGAC",5,42.42,8.27,-2.49,0.16,2.61,1.13,0.01,">1 nonsynonymous","N40K S113I",2
"lib1","SARS-CoV-2","CCATGAAATTCAATAT",4,1.89,NA,NA,NA,NA,NA,NA,"stop","N4Q Y35S C49* G86C C158R",5
"lib1","SARS-CoV-2","CCATGAACTGCATCAA",2,14.86,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D34T Y66C G74T N120D",4
"lib1","SARS-CoV-2","CCATGAAGCCCCTGAA",7,58.74,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I104R G166S",2
"lib1","SARS-CoV-2","CCATGAATATCTTCTT",6,46.1,6,-4.76,2,2.12,1.2,0.01,">1 nonsynonymous","V52G C61R V77N G83A",4
"lib1","SARS-CoV-2","CCATGAATGAACATGG",2,69.99,10.72,-0.05,0.05,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATGACATGATGCTA",1,15.19,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6L S41V Q79W A89E F134T Y159A K198M",7
"lib1","SARS-CoV-2","CCATGACCATATACCG",2,182.43,8.55,-2.21,0.12,2.87,1.07,0.01,">1 nonsynonymous","Y119T F156S V173E",3
"lib1","SARS-CoV-2","CCATGACCCATTATGC",15,66.23,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W106D G146L",2
"lib1","SARS-CoV-2","CCATGACCTGACCTAA",3,4.33,NA,NA,NA,NA,NA,NA,"stop","P7* C49I",2
"lib1","SARS-CoV-2","CCATGACCTTATATCA",5,15.49,7.42,-3.34,0.34,1.5,1.09,0.04,">1 nonsynonymous","R27S F99R W106S Y121F",4
"lib1","SARS-CoV-2","CCATGACCTTTCGATC",1,77.81,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K26G T55D G166L Y175T",4
"lib1","SARS-CoV-2","CCATGACTACGTCTAT",3,35.51,9.67,-1.09,0.18,1.6,1.13,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","CCATGAGAAATCTACG",2,12.54,8.58,-2.18,0.14,1.92,1.03,0.01,">1 nonsynonymous","Q84H N118I S147E",3
"lib1","SARS-CoV-2","CCATGAGCAAGGATTA",2,48.46,10.73,-0.03,0.06,2.91,1.05,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","CCATGAGCCTCCGGAC",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78T Y91C S129V G155R Q163V",5
"lib1","SARS-CoV-2","CCATGAGCTAAGAAAG",4,46.94,9.18,-1.58,0.18,1.67,1.25,0.02,">1 nonsynonymous","T85Y S184D H189V",3
"lib1","SARS-CoV-2","CCATGAGGCCCATACT",6,31.82,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9L A14N L57T Y66V I72W Y178S",6
"lib1","SARS-CoV-2","CCATGAGTCGCCACCC",9,166.51,9.3,-1.47,0.09,2.14,1.09,0,">1 nonsynonymous","S69R S129G Q168N",3
"lib1","SARS-CoV-2","CCATGATATGGCTGAT",8,109.39,10.66,-0.11,0.05,2.89,1.04,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","CCATGATCAATAAAGC",2,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94Y G101L Q163F V173P",4
"lib1","SARS-CoV-2","CCATGATCAATTCAAA",2,67.63,9.32,-1.44,0.14,1.56,1.09,0.01,">1 nonsynonymous","G9I A105Q S184V",3
"lib1","SARS-CoV-2","CCATGATCACCGCCAC",3,68.71,8.02,-2.75,0.24,2.26,1.1,0.02,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","CCATGATGTACCTTAG",3,24.03,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3K C49T T85I N107P",4
"lib1","SARS-CoV-2","CCATGATTCAAATAGG",4,116.79,9.98,-0.79,0.07,2.84,1.01,0,">1 nonsynonymous","A42Y Y119R",2
"lib1","SARS-CoV-2","CCATGATTTGACATCC",11,183,9.39,-1.38,0.05,2.82,1.12,0,">1 nonsynonymous","N64K K87S T100L G174R",4
"lib1","SARS-CoV-2","CCATGATTTTGCCAGG",4,0.12,NA,NA,NA,NA,NA,NA,"stop","Y119T P149T G155* G172E T201N",5
"lib1","SARS-CoV-2","CCATGCAACACCGGGT",1,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L Q163P",2
"lib1","SARS-CoV-2","CCATGCAACGGACTAA",2,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Q G51Y",2
"lib1","SARS-CoV-2","CCATGCAATGTTGCAT",3,22.89,8.53,-2.24,0.21,1.84,1.12,0.02,">1 nonsynonymous","R16H N107Q F134G S164L",4
"lib1","SARS-CoV-2","CCATGCACATACAAAG",2,934.73,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","S45Q L60T C150K",3
"lib1","SARS-CoV-2","CCATGCACTACACGGC",1,13.62,9.12,-1.64,0.08,2.97,1.06,0,">1 nonsynonymous","P149F Q168L",2
"lib1","SARS-CoV-2","CCATGCCCAACATAGG",1,69.54,10.38,-0.39,0.06,2.87,1.02,0,"1 nonsynonymous","A14C",1
"lib1","SARS-CoV-2","CCATGCCCAAGAGAGG",3,10.89,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I2Y T140G F167G",3
"lib1","SARS-CoV-2","CCATGCCCAGAACGTG",7,84.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90S Y121F S129I G172W",4
"lib1","SARS-CoV-2","CCATGCCCTATGACAT",4,0.27,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","CCATGCGACGGTTATG",3,22.46,10.12,-0.65,0.1,2.84,1.03,0,"1 nonsynonymous","E154I",1
"lib1","SARS-CoV-2","CCATGCGATTCAAGAC",2,14.93,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6M S41V K48M C61S R127F",5
"lib1","SARS-CoV-2","CCATGCGCGCAAGGAG",3,23.02,10.89,0.13,0.07,2.94,1.01,0,">1 nonsynonymous","I2A T100F",2
"lib1","SARS-CoV-2","CCATGCTAAACTTGTG",6,35.17,6.17,-4.59,0.73,1.5,1.2,0.02,">1 nonsynonymous","N58L G83V E141F T148M",4
"lib1","SARS-CoV-2","CCATGCTCTGCTCCAC",4,45.98,9.59,-1.18,0.16,1.75,1.16,0.01,">1 nonsynonymous","I2K A89S P133R L188P",4
"lib1","SARS-CoV-2","CCATGCTCTGGCTATG",6,61.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T15S Y66A F167P",3
"lib1","SARS-CoV-2","CCATGGAAAGCGATGT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCATGGAAGGAACACT",8,5.34,NA,NA,NA,NA,NA,NA,"stop","T85M D98T N107P P133C G174* E186L",6
"lib1","SARS-CoV-2","CCATGGACACAGATAA",3,71.15,9.09,-1.67,0.16,1.64,1.14,0.01,">1 nonsynonymous","S36L T85K W106A",3
"lib1","SARS-CoV-2","CCATGGACATATCGAA",3,3.49,NA,NA,NA,NA,NA,NA,"stop","S29W Y91* N118D",3
"lib1","SARS-CoV-2","CCATGGACTCCCCCTG",2,20.28,10.19,-0.57,0.09,2.92,1.01,0,"1 nonsynonymous","C6G",1
"lib1","SARS-CoV-2","CCATGGCCGAAAGAAA",1,31.91,8.61,-2.16,0.12,2.57,1.18,0.01,">1 nonsynonymous","V37R S113R",2
"lib1","SARS-CoV-2","CCATGGGAATATATGG",2,74.59,10.62,-0.14,0.04,2.91,1.03,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","CCATGGGCACCGCAAA",1,32.79,9.28,-1.49,0.09,1.86,1.07,0,">1 nonsynonymous","F8E R16K I138Q P197L",4
"lib1","SARS-CoV-2","CCATGGTAAGGCTTCT",9,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q G51D C158T",3
"lib1","SARS-CoV-2","CCATGGTCGTACTACA",6,0.87,NA,NA,NA,NA,NA,NA,"stop","Q84S E141*",2
"lib1","SARS-CoV-2","CCATGGTGTTAAAATA",5,54.74,7.67,-3.1,0.25,1.5,1.17,0.02,">1 nonsynonymous","R27L S41Q A81T N118R",4
"lib1","SARS-CoV-2","CCATGTCCGCATCCAA",10,60.61,9.12,-1.64,0.22,1.5,1.11,0.03,">1 nonsynonymous","G86L S184V",2
"lib1","SARS-CoV-2","CCATGTCCTAACTTTG",5,77.45,9.82,-0.94,0.12,2.38,1.04,0.01,">1 nonsynonymous","C6L K26F",2
"lib1","SARS-CoV-2","CCATGTCTAAACGCTG",12,111.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F70R E141M",2
"lib1","SARS-CoV-2","CCATGTCTCAAGGGCT",4,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G83I K87Y I104S F160C",5
"lib1","SARS-CoV-2","CCATTAAAAAAGATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib1","SARS-CoV-2","CCATTAAAAGCAGACG",4,30.23,8.31,-2.46,0.44,1.5,1,0.08,">1 nonsynonymous","W23K C61R G116L",3
"lib1","SARS-CoV-2","CCATTAAACCAGTTGC",7,27.38,6,-4.76,1.81,1.5,1.18,0.05,">1 nonsynonymous","R27T S113T G155L V173S",4
"lib1","SARS-CoV-2","CCATTAAATAATATCT",1,13.13,10.37,-0.39,0.09,2.87,1.11,0,"1 nonsynonymous","A89C",1
"lib1","SARS-CoV-2","CCATTAAATGAATAAT",7,112.49,10.8,0.04,0.08,2.89,1.07,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","CCATTAACACCAGTGA",5,40.14,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","F62N D137M P161N",3
"lib1","SARS-CoV-2","CCATTAACCGGTCGGA",6,81.92,10.75,-0.02,0.1,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTAACGGGGCGGA",3,120.55,6.54,-4.22,0.31,1.5,1.15,0.01,">1 nonsynonymous","F44S L125D F160P Y178W S184A",5
"lib1","SARS-CoV-2","CCATTAAGACCCATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","K56* G116F",2
"lib1","SARS-CoV-2","CCATTAAGACTTACAA",2,81.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9L T63K N157I V173G Q176L",5
"lib1","SARS-CoV-2","CCATTAAGAGTTATCA",2,11.94,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6L T15I G86W E141C A192G",5
"lib1","SARS-CoV-2","CCATTAAGCATAAAAC",3,134.75,10.82,0.06,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTACAAAAAGCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87H N120T",2
"lib1","SARS-CoV-2","CCATTACAAAACAGAT",4,72.5,10.17,-0.59,0.04,2.93,1.03,0,">1 nonsynonymous","I2V V37G Q163E",3
"lib1","SARS-CoV-2","CCATTACACGAGCAAT",11,39.54,6.57,-4.19,0.33,1.5,1.15,0.01,">1 nonsynonymous","G86K F160I",2
"lib1","SARS-CoV-2","CCATTACACTACCATA",1,18.52,6.43,-4.34,0.72,1.5,1.15,0.04,">1 nonsynonymous","F47Y W106V K114L N151S",4
"lib1","SARS-CoV-2","CCATTACATTTATAGA",2,8.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K W106V C150H",3
"lib1","SARS-CoV-2","CCATTACCAAAGATAG",7,77.32,10.13,-0.64,0.05,2.6,1,0,">1 nonsynonymous","E76A G196Q",2
"lib1","SARS-CoV-2","CCATTACCGAATTTAC",4,0.32,NA,NA,NA,NA,NA,NA,"stop","P96Y K128* G155E",3
"lib1","SARS-CoV-2","CCATTACGACAAAAGA",2,49.68,8.83,-1.93,0.08,2.79,1.1,0,">1 nonsynonymous","V115T E141D G174I C195S",4
"lib1","SARS-CoV-2","CCATTACTAATCTACG",5,1.28,NA,NA,NA,NA,NA,NA,"stop","Y66T P82W P96* D112V F160S T170S",6
"lib1","SARS-CoV-2","CCATTACTCTACTTAT",2,82.46,10.74,-0.03,0.04,2.91,1.07,0,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","CCATTACTTTCACTAA",2,11.16,10.1,-0.67,0.23,1.94,1,0.02,">1 nonsynonymous","F17I A33Y Q84F",3
"lib1","SARS-CoV-2","CCATTAGAAACCTATA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A E135A V194I",3
"lib1","SARS-CoV-2","CCATTAGAAGGCGAGG",3,105.5,10.05,-0.72,0.06,2.64,1.04,0,">1 nonsynonymous","S41P P54S S139R",3
"lib1","SARS-CoV-2","CCATTAGACATAATCT",3,55.15,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38P T63K V77E G83Y L122F T201W",6
"lib1","SARS-CoV-2","CCATTAGAGAATATAA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98R A105V Y119T",3
"lib1","SARS-CoV-2","CCATTAGAGAGTCCAG",2,68.74,9.68,-1.09,0.05,2.73,1.11,0,"1 nonsynonymous","G146F",1
"lib1","SARS-CoV-2","CCATTAGATATACACA",5,19.35,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","K48N T55I I72R",3
"lib1","SARS-CoV-2","CCATTAGCATCGGGAC",2,0.23,NA,NA,NA,NA,NA,NA,"stop","E10L Y39N Q84* N118Y E141G",5
"lib1","SARS-CoV-2","CCATTAGCTGTATGCA",5,10.49,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F62T E76T G83W D98T",4
"lib1","SARS-CoV-2","CCATTAGTAACCTACT",13,3.12,NA,NA,NA,NA,NA,NA,"stop","G9* G152H K199Y",3
"lib1","SARS-CoV-2","CCATTAGTGCGCCATT",1,31.12,10.79,0.02,0.04,2.95,1.04,0,"1 nonsynonymous","D97I",1
"lib1","SARS-CoV-2","CCATTAGTGTACGCCT",5,1.71,NA,NA,NA,NA,NA,NA,"stop","I2W N30* G51P V173G K199Q",5
"lib1","SARS-CoV-2","CCATTAGTTAGGTGAA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","G9V S53L L60* I138N T201V",5
"lib1","SARS-CoV-2","CCATTAGTTTACGGAG",4,0.17,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib1","SARS-CoV-2","CCATTATACGTATGAA",12,195.42,10.04,-0.72,0.04,2.93,1.01,0,">1 nonsynonymous","L5P C31G K87L N130R",4
"lib1","SARS-CoV-2","CCATTATCGATACATA",7,3.79,NA,NA,NA,NA,NA,NA,"stop","W23* S45T C61T G86R N107E K132S L162Q",7
"lib1","SARS-CoV-2","CCATTATCTATGGACT",6,111.82,9.86,-0.9,0.09,2.42,1.05,0,">1 nonsynonymous","N30A N107S",2
"lib1","SARS-CoV-2","CCATTATGACAATAAA",4,46.52,6.03,-4.74,0.46,1.5,1.11,0,">1 nonsynonymous","A14C L60S G101N V173I",4
"lib1","SARS-CoV-2","CCATTATTAACTAAAT",9,48.14,8.36,-2.4,0.2,2.42,1.12,0.02,">1 nonsynonymous","A22G S36R F126N T201N",4
"lib1","SARS-CoV-2","CCATTATTTCAAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L S19* C31E N58R G83F S113Q Y119F S139I P161T",9
"lib1","SARS-CoV-2","CCATTCAATGACCACA",4,37.4,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I104Q G146D",2
"lib1","SARS-CoV-2","CCATTCAGCAAGATAA",3,51.17,8.47,-2.29,0.13,1.86,1.14,0.01,">1 nonsynonymous","Y21V V52A Y119R",3
"lib1","SARS-CoV-2","CCATTCAGTACCTCAA",1,7.81,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D34P P54A S139I F167M",4
"lib1","SARS-CoV-2","CCATTCATAGGCCATG",3,19.16,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I28E K94H P161N N171D",4
"lib1","SARS-CoV-2","CCATTCATGATAAAAC",1,23.4,10.55,-0.22,0.08,2.96,1.04,0,"1 nonsynonymous","A190G",1
"lib1","SARS-CoV-2","CCATTCCACATCAGAT",12,48.37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20L F70Y L122K F156K V173E",5
"lib1","SARS-CoV-2","CCATTCCCAAATAAAG",4,38.32,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9T T15L D112M Y159V",4
"lib1","SARS-CoV-2","CCATTCCCTTCATCAC",5,60.78,10.79,0.02,0.1,2.95,1.03,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","CCATTCCGACATCGTA",2,32.52,10.67,-0.1,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCATTCCGTCGAAAAA",3,31.98,10.75,-0.02,0.11,2.77,1.13,0,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","CCATTCCGTGTAAACA",3,10.34,NA,NA,NA,NA,NA,0.23,"1 nonsynonymous","P177W",1
"lib1","SARS-CoV-2","CCATTCCTTTACTGAC",1,21.43,9.94,-0.82,0.11,2.6,1,0.01,">1 nonsynonymous","C6S L131V",2
"lib1","SARS-CoV-2","CCATTCGCATTTCACG",6,37.28,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","F8R F99P Q168P",3
"lib1","SARS-CoV-2","CCATTCTATATGATAT",4,23.04,10.63,-0.14,0.08,2.83,1.15,0,"1 nonsynonymous","L122H",1
"lib1","SARS-CoV-2","CCATTCTTCGAAGTAA",7,150.06,10,-0.77,0.05,2.88,1.02,0,">1 nonsynonymous","T55L R73S",2
"lib1","SARS-CoV-2","CCATTCTTTCGTCCTT",4,65.35,10.76,0,0.04,2.97,1,0,">1 nonsynonymous","R16S V32M",2
"lib1","SARS-CoV-2","CCATTGAAAACGTCTA",1,15.7,9.76,-1.01,0.09,2.28,1,0.01,">1 nonsynonymous","K48H V52L L57Q",3
"lib1","SARS-CoV-2","CCATTGAAACAATCGC",9,1.72,NA,NA,NA,NA,NA,NA,"stop","S36L F44N I104* R136F",4
"lib1","SARS-CoV-2","CCATTGAAGATCTTAC",6,6.95,6.64,-4.12,0.37,2.15,1.12,0.02,">1 nonsynonymous","F8Y P96A Y165A L183D",4
"lib1","SARS-CoV-2","CCATTGAATAGGTCCT",4,34.18,6.8,-3.96,0.51,1.5,1.12,0.06,">1 nonsynonymous","L95R Y143N",2
"lib1","SARS-CoV-2","CCATTGACAGCATACG",5,67.61,8.81,-1.96,0.1,2.16,1.08,0,">1 nonsynonymous","F44N L60E D97G",3
"lib1","SARS-CoV-2","CCATTGATCATCAACA",4,7.06,NA,NA,NA,NA,NA,NA,"stop","D34G A42L D68*",3
"lib1","SARS-CoV-2","CCATTGCATCGGTTCC",4,124.75,10.54,-0.23,0.05,2.8,1.06,0,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","CCATTGCCTGAACGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K132V E135*",2
"lib1","SARS-CoV-2","CCATTGCTACAAGTAC",7,93.07,10.8,0.03,0.06,2.97,1.01,0,"1 nonsynonymous","V173K",1
"lib1","SARS-CoV-2","CCATTGGAAATGAAAT",1,12.19,10.92,0.16,0.09,2.83,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCATTGGCACAGTAAA",4,11.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6A W23K F62I G86R A105S Y143H",6
"lib1","SARS-CoV-2","CCATTGGCATGTTCAG",2,12.47,10.83,0.06,0.1,2.93,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCATTGGTACTCCCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M F167P Q176L V181L",4
"lib1","SARS-CoV-2","CCATTGGTAGTATGGG",5,78.66,10.55,-0.22,0.04,2.89,1.04,0,">1 nonsynonymous","V11I A89C K199L",3
"lib1","SARS-CoV-2","CCATTGTAGTTTGAAG",2,8.6,6,-4.76,2,3,1.31,0.04,">1 nonsynonymous","T15A F70L T85K R124F",4
"lib1","SARS-CoV-2","CCATTGTCTTGGAAGG",3,42.22,10.87,0.1,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTGTGCATCAAGG",2,63.07,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F44N L57A D75T W106H Y119H A145D Y178V",7
"lib1","SARS-CoV-2","CCATTGTTCCAGTAGA",2,64.42,10.75,-0.02,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTTAAATAAAAAT",1,12.38,6.17,-4.59,0.56,1.75,1.14,0.01,">1 nonsynonymous","G86T L95R G166K",3
"lib1","SARS-CoV-2","CCATTTAAGACACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib1","SARS-CoV-2","CCATTTAAGCATAGTG",3,33.14,6,-4.76,1.43,1.5,1.22,0.03,">1 nonsynonymous","R25L F167S S200Y",3
"lib1","SARS-CoV-2","CCATTTACATAACATT",1,26.08,10.78,0.02,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTTACATCGGATG",1,35.87,10.78,0.02,0.06,2.82,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCATTTACCAATGCCA",2,6.72,6.44,-4.33,0.54,1.81,1.18,0.02,">1 nonsynonymous","G86N S139F N171T",3
"lib1","SARS-CoV-2","CCATTTACCATGTGTG",10,3.01,NA,NA,NA,NA,NA,NA,"stop","K26* Y123S S129L",3
"lib1","SARS-CoV-2","CCATTTAGAAAACATG",5,12.57,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G51S G101R G146F",3
"lib1","SARS-CoV-2","CCATTTCAAAACTTAC",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G A42R T63N D97E A105L",5
"lib1","SARS-CoV-2","CCATTTCCCCAAGCTA",5,31.27,10.76,0,0.08,2.92,1,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","CCATTTCCTAGTTCTT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","K87* Q168P",2
"lib1","SARS-CoV-2","CCATTTCGGCTAGTTA",1,25.18,7.19,-3.58,0.46,1.5,1.09,0.05,">1 nonsynonymous","C6K D90W W106Q L131P",4
"lib1","SARS-CoV-2","CCATTTCTACTATGGG",5,95.13,8.99,-1.77,0.09,2.49,1.17,0,">1 nonsynonymous","C61L T170Q Y178S",3
"lib1","SARS-CoV-2","CCATTTCTTAGAATAG",5,53.77,10.86,0.1,0.07,2.96,1,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","CCATTTGATAGACCCA",9,2.63,NA,NA,NA,NA,NA,NA,"stop","E10Y S29V D68M A81* A145L",5
"lib1","SARS-CoV-2","CCATTTGCAAAAGGAG",4,28.43,8.13,-2.63,0.17,1.81,1.12,0.01,">1 nonsynonymous","C31I Q144L L188N",3
"lib1","SARS-CoV-2","CCATTTGCCGTGATGG",2,36.98,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","T63K W106L C150E",3
"lib1","SARS-CoV-2","CCATTTGGATAAGTAG",3,14.5,10.64,-0.12,0.42,1.5,1,0.05,">1 nonsynonymous","L122K P133I V173S",3
"lib1","SARS-CoV-2","CCATTTGGATATGCTG",4,58.63,10.07,-0.69,0.08,2.73,1,0,">1 nonsynonymous","V37K T46G",2
"lib1","SARS-CoV-2","CCATTTTAAAACATAA",2,5.94,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I28L C49S K94R",3
"lib1","SARS-CoV-2","CCATTTTACCCTGTAA",1,63.35,10.17,-0.59,0.07,2.75,1.03,0,">1 nonsynonymous","F12L S43V L60A",3
"lib1","SARS-CoV-2","CCATTTTACGTCCGAT",1,13.63,6.2,-4.57,0.48,2.07,1.08,0.01,">1 nonsynonymous","N107F L122R S129P G174E",4
"lib1","SARS-CoV-2","CCATTTTAGAGAAATT",3,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A R78L N92Y D137E",4
"lib1","SARS-CoV-2","CCATTTTAGCCCTTAA",7,280.61,8.66,-2.1,0.09,2.91,1.08,0,">1 nonsynonymous","G155D T170R",2
"lib1","SARS-CoV-2","CCATTTTGAGCTTGCT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","F70M A89V R127L T170* T201Y",5
"lib1","SARS-CoV-2","CCATTTTGGAACAATA",6,74.15,10.67,-0.09,0.08,2.86,1.09,0,">1 nonsynonymous","D97R N171A L188H",3
"lib1","SARS-CoV-2","CCATTTTGTATTAATC",5,16.5,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I2T S45K R124T Q168L",4
"lib1","SARS-CoV-2","CCATTTTTAAGCCAAT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y A145F Y175D",3
"lib1","SARS-CoV-2","CCATTTTTTTGAATAA",3,55.81,10.84,0.08,0.07,2.91,1.05,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","CCCAAAAAAAAATGCA",3,99.57,10.53,-0.23,0.04,2.85,1.09,0,"1 nonsynonymous","R78L",1
"lib1","SARS-CoV-2","CCCAAAAAACAACCAA",3,1.25,NA,NA,NA,NA,NA,NA,"stop","N92* F99W",2
"lib1","SARS-CoV-2","CCCAAAAACAGCGGAG",2,55.91,6,-4.76,1.23,1.5,1.1,0,">1 nonsynonymous","R78L N118T S129L N157A H189N",5
"lib1","SARS-CoV-2","CCCAAAAACCATAATA",3,101.43,10.05,-0.71,0.08,2.62,1.02,0,">1 nonsynonymous","G9C I28V",2
"lib1","SARS-CoV-2","CCCAAAAACGAAAACC",2,13.07,6.8,-3.97,0.55,1.5,1.05,0.06,">1 nonsynonymous","K94Y E154N V173C",3
"lib1","SARS-CoV-2","CCCAAAAAGACACAAC",1,22.06,10.76,-0.01,0.07,2.97,1,0,"1 nonsynonymous","I104V",1
"lib1","SARS-CoV-2","CCCAAAACATGAACGG",4,0.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13S",1
"lib1","SARS-CoV-2","CCCAAAACGATACCAG",1,8.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L W106G Y121L P149C",4
"lib1","SARS-CoV-2","CCCAAAACGCTGGACA",1,60.83,9.96,-0.8,0.04,2.76,1.11,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","CCCAAAACTAGCCACA",2,2.13,NA,NA,NA,NA,NA,NA,"stop","Q79R D90H Y165*",3
"lib1","SARS-CoV-2","CCCAAAACTGTATATT",7,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V C31E V103I N130M",4
"lib1","SARS-CoV-2","CCCAAAAGATACAAAT",3,24.07,10.75,-0.01,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAAAAGCAGGTAAT",3,32.45,10.01,-0.75,0.11,2.14,1,0,">1 nonsynonymous","C49V S129A",2
"lib1","SARS-CoV-2","CCCAAAAGCCCTCTAA",9,14.13,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","A22I S41C R136L Y175S",4
"lib1","SARS-CoV-2","CCCAAAAGGCTACCTG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","S45* Q144C",2
"lib1","SARS-CoV-2","CCCAAAAGGTGAACAC",2,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24Y V77W G146W",3
"lib1","SARS-CoV-2","CCCAAAATCCATTTAT",2,11.77,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","P133T V153H",2
"lib1","SARS-CoV-2","CCCAAAATGGTAGGAT",4,65.51,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G117N Y165G V173Y",3
"lib1","SARS-CoV-2","CCCAAAATGTTTCCAA",11,41.77,6.52,-4.24,0.48,1.5,1.23,0.02,">1 nonsynonymous","T15I D90I S184R",3
"lib1","SARS-CoV-2","CCCAAAATTTGATAAC",4,48.83,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4S I80H",2
"lib1","SARS-CoV-2","CCCAAACACGCTACAA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib1","SARS-CoV-2","CCCAAACAGTCCCCAA",1,15.01,8.99,-1.77,0.2,1.7,1.18,0.03,">1 nonsynonymous","V37L P133R P191I",3
"lib1","SARS-CoV-2","CCCAAACCCTTAGTCT",3,42.58,8.77,-1.99,0.08,2.2,1.12,0,">1 nonsynonymous","P54I N118R S139C",3
"lib1","SARS-CoV-2","CCCAAACCGATATCCA",1,18.93,10.65,-0.11,0.12,2.92,1.02,0.01,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CCCAAACCGATTTCTG",2,43.97,7.93,-2.83,0.31,1.5,1.11,0.03,">1 nonsynonymous","Y50I S113A Y143M",3
"lib1","SARS-CoV-2","CCCAAACCGGCCAAGT",2,39.4,10.17,-0.6,0.12,2.47,1,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","CCCAAACCTAAAATTA",1,1.38,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCCAAACGACATACTA",1,9.63,9.61,-1.16,0.11,2.92,1,0,">1 nonsynonymous","Y35L F62S T170N",3
"lib1","SARS-CoV-2","CCCAAACGCCTCAGCT",1,31.37,10.17,-0.59,0.07,2.79,1.07,0,"1 nonsynonymous","S139F",1
"lib1","SARS-CoV-2","CCCAAACTAAGATCGC",6,63.83,10.55,-0.21,0.05,2.87,1.03,0,">1 nonsynonymous","N1D S45K Y119A N171F",4
"lib1","SARS-CoV-2","CCCAAACTATAATGAA",3,15.1,10.38,-0.39,0.1,2.83,1.03,0.01,">1 nonsynonymous","A33T T85H F134A",3
"lib1","SARS-CoV-2","CCCAAACTCAGATTTC",8,45.98,6.38,-4.39,0.4,1.5,1.19,0.02,">1 nonsynonymous","F17C L57S P82T G86L",4
"lib1","SARS-CoV-2","CCCAAACTCTACATTA",6,46.16,9.88,-0.88,0.14,1.75,1.11,0.01,">1 nonsynonymous","I2A N24G S139W",3
"lib1","SARS-CoV-2","CCCAAACTTCCCGCTT",1,67.08,8.59,-2.17,0.09,2.85,1.06,0,">1 nonsynonymous","Q84R F126G",2
"lib1","SARS-CoV-2","CCCAAACTTTTAACGA",10,68.97,7.31,-3.45,0.34,1.5,1.23,0.03,">1 nonsynonymous","A81T W106F N120Y T201R",4
"lib1","SARS-CoV-2","CCCAAAGAAATGTAAC",1,33.13,10.03,-0.73,0.12,2.43,1.07,0,">1 nonsynonymous","D34I N40Q",2
"lib1","SARS-CoV-2","CCCAAAGACACATAAA",3,14.1,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D98F Y123S I142G S184G",4
"lib1","SARS-CoV-2","CCCAAAGATTACATCT",4,23.16,10.02,-0.74,0.13,2.59,1.09,0.01,">1 nonsynonymous","W106R A192M K198G",3
"lib1","SARS-CoV-2","CCCAAAGCAATGCGAG",1,19.09,10.25,-0.51,0.08,2.86,1.05,0.01,">1 nonsynonymous","Y35G D97L",2
"lib1","SARS-CoV-2","CCCAAAGCGATAGACG",14,88.58,6,-4.76,1.62,1.5,1.22,0.02,">1 nonsynonymous","G101I L122P",2
"lib1","SARS-CoV-2","CCCAAAGGATAGCTCT",2,8.36,8.62,-2.15,0.17,2.76,1.08,0.01,">1 nonsynonymous","F44T G166C",2
"lib1","SARS-CoV-2","CCCAAAGGGTTAGTAT",1,10.83,10.62,-0.15,0.07,2.88,1.14,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","CCCAAAGGTTTGTCAC",3,27.6,10.26,-0.5,0.09,2.89,1,0,">1 nonsynonymous","T63F P149I",2
"lib1","SARS-CoV-2","CCCAAAGTACATTACC",5,23.23,9.02,-1.75,0.16,1.83,1.2,0.01,">1 nonsynonymous","V11R T148I",2
"lib1","SARS-CoV-2","CCCAAATCACACATAA",2,29.29,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20R T100H N118F",3
"lib1","SARS-CoV-2","CCCAAATGACTAAGAA",10,3.82,NA,NA,NA,NA,NA,NA,"stop","T63N V103S Y123E E141*",4
"lib1","SARS-CoV-2","CCCAAATGCAATTGAG",9,21.83,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D34S V77R N118V N171S",4
"lib1","SARS-CoV-2","CCCAAATGGTTACAGT",6,70.3,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","G9L V37P I142L Y159T",4
"lib1","SARS-CoV-2","CCCAAATTTTTACTGG",4,38.7,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","S36I C150G E154L",3
"lib1","SARS-CoV-2","CCCAACAAAGTTTAAC",3,27.11,7.28,-3.48,0.33,1.5,1.12,0.03,"1 nonsynonymous","F47D",1
"lib1","SARS-CoV-2","CCCAACACAGACAAGC",2,9.77,7.56,-3.21,0.52,1.5,1.06,0.05,">1 nonsynonymous","A89I G152M E186K",3
"lib1","SARS-CoV-2","CCCAACACCCCTAACA",2,18.44,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","L5G Q79L Y123V I138A P149L N157V",6
"lib1","SARS-CoV-2","CCCAACACGCATGAAG",1,48.02,10.66,-0.1,0.05,2.92,1.05,0,"1 nonsynonymous","T3H",1
"lib1","SARS-CoV-2","CCCAACACTCCTTCCC",6,98.17,9.4,-1.36,0.09,1.96,1.11,0,">1 nonsynonymous","F17L N171S",2
"lib1","SARS-CoV-2","CCCAACAGAATTATAC",3,27.34,10.69,-0.07,0.07,2.88,1.13,0,">1 nonsynonymous","A42R T55I T140S",3
"lib1","SARS-CoV-2","CCCAACATAAGATTTC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","D112Y S129*",2
"lib1","SARS-CoV-2","CCCAACATACTGGCGG",11,88.23,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A22E G86V",2
"lib1","SARS-CoV-2","CCCAACATGGCGGTTA",2,29.09,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S41T S113M Y119C P161L",4
"lib1","SARS-CoV-2","CCCAACATGTCACAGG",2,30.91,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","C6V N92I V115T",3
"lib1","SARS-CoV-2","CCCAACATTGCACAAT",1,14.69,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G86V N107E G152K L162E V173Y",5
"lib1","SARS-CoV-2","CCCAACCAACGAACAA",7,35.8,10.64,-0.12,0.08,2.86,1.08,0,">1 nonsynonymous","E10A K56Q",2
"lib1","SARS-CoV-2","CCCAACCACGCAGTAT",3,25.21,9.94,-0.82,0.18,2.32,1.13,0.01,">1 nonsynonymous","F44T D90M K199E",3
"lib1","SARS-CoV-2","CCCAACCCCGAACACA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143* T148P Y175I",3
"lib1","SARS-CoV-2","CCCAACCCTAGCCGCT",7,76.27,9.86,-0.91,0.11,1.88,1.05,0,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","CCCAACCGTGCGCCAG",3,62.47,6.68,-4.09,0.36,1.5,1.18,0.02,">1 nonsynonymous","P7L T100G N120V N171S",4
"lib1","SARS-CoV-2","CCCAACCTTGATTGCA",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P W23L L60M G146E",4
"lib1","SARS-CoV-2","CCCAACGATTATGAAG",1,38.8,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","N4L K128T P133L G166M",4
"lib1","SARS-CoV-2","CCCAACGTCTATGGTA",1,26.19,9.76,-1.01,0.12,2.84,1.04,0,"1 nonsynonymous","R73A",1
"lib1","SARS-CoV-2","CCCAACTCGGACCGTA",4,69.48,10.02,-0.74,0.06,2.03,1.04,0,">1 nonsynonymous","Q84L S184E",2
"lib1","SARS-CoV-2","CCCAACTCTTTCTAAT",3,9.95,10.55,-0.22,0.08,2.87,1,0,"1 nonsynonymous","T63W",1
"lib1","SARS-CoV-2","CCCAACTGCACGGCTA",5,104.72,10.51,-0.25,0.03,2.91,1.04,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","CCCAACTGGTATCCAC",1,5.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73S D137A",2
"lib1","SARS-CoV-2","CCCAAGAAACATCCCT",3,45.72,6,-4.76,1.35,1.5,1.12,0,">1 nonsynonymous","G86V K132G G174E",3
"lib1","SARS-CoV-2","CCCAAGAAATTGAGCA",3,120.5,9.81,-0.95,0.08,2.55,1.06,0,"1 nonsynonymous","G116C",1
"lib1","SARS-CoV-2","CCCAAGAACCTGTACG",1,30,9.98,-0.79,0.07,2.94,1,0,">1 nonsynonymous","E154H G174N",2
"lib1","SARS-CoV-2","CCCAAGAATGGCATGT",1,17.43,10.59,-0.18,0.06,2.95,1,0,">1 nonsynonymous","S41R V65I",2
"lib1","SARS-CoV-2","CCCAAGACGGGCTGCT",5,94.49,8.32,-2.44,0.16,2.76,1.03,0.01,">1 nonsynonymous","N58R Y159P",2
"lib1","SARS-CoV-2","CCCAAGATAGACTGGT",8,83.91,10.72,-0.04,0.07,2.88,1.08,0,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","CCCAAGATAGATTAGA",9,65.29,6.04,-4.73,1.09,1.5,1.26,0.02,">1 nonsynonymous","Y93A V115A",2
"lib1","SARS-CoV-2","CCCAAGATGCCTTCTC",1,38.9,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10R C49V N107D",3
"lib1","SARS-CoV-2","CCCAAGCAAATACCAA",1,39.82,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","V65E Y121F V182M",3
"lib1","SARS-CoV-2","CCCAAGCCTACAACCA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","Y50* I88Y F156S",3
"lib1","SARS-CoV-2","CCCAAGCTTCCCAACT",2,35.79,10.73,-0.03,0.07,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAAGGCAGAAAACG",2,25.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","E76V N92V",2
"lib1","SARS-CoV-2","CCCAAGGTAAAAAATT",3,45.57,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G86D P96N Y165V",3
"lib1","SARS-CoV-2","CCCAAGGTAAATAAAC",4,8.17,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41F D98Y W106R K128S E154V",5
"lib1","SARS-CoV-2","CCCAAGTGAAGCTTGG",5,89.06,10.36,-0.41,0.04,2.95,1.02,0,">1 nonsynonymous","D59G D90R T148I",3
"lib1","SARS-CoV-2","CCCAAGTGCCGAATAT",4,64.66,10.81,0.05,0.08,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAAGTGGAACATTT",1,8.94,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1R K87R V181K",3
"lib1","SARS-CoV-2","CCCAAGTTAGAACGAT",5,30.82,7.34,-3.43,0.26,1.5,1.07,0.03,">1 nonsynonymous","C61F I88Q L125N",3
"lib1","SARS-CoV-2","CCCAAGTTGCAGATTA",6,13.03,10.89,0.12,0.09,2.82,1.13,0,">1 nonsynonymous","N130T T201H",2
"lib1","SARS-CoV-2","CCCAAGTTTTAATTAC",1,15.43,6,-4.76,0.86,3,1.1,0,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","CCCAAGTTTTTCACAT",6,79.52,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A81L N157C",2
"lib1","SARS-CoV-2","CCCAATAAAAGCCGAT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","R124A A192T T201*",3
"lib1","SARS-CoV-2","CCCAATACACATAAGT",7,2.73,NA,NA,NA,NA,NA,NA,"stop","Y50* L122* T140P A190F",4
"lib1","SARS-CoV-2","CCCAATACAGGCTACT",11,113.9,6.04,-4.72,1.01,1.5,1.17,0.02,">1 nonsynonymous","Q84K R124C",2
"lib1","SARS-CoV-2","CCCAATACCCAAAAAA",5,63.09,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3E G9Y K48C K94Y L131S N151E Y165L",7
"lib1","SARS-CoV-2","CCCAATACCGGTCTAA",2,27.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R73L G101M Q168T",3
"lib1","SARS-CoV-2","CCCAATAGCAGAGCCT",6,80.05,6.05,-4.71,1.02,1.5,1.2,0.02,">1 nonsynonymous","Y39V P54L N107T E141P S147R",5
"lib1","SARS-CoV-2","CCCAATATAGATATAG",3,68.7,10.64,-0.12,0.06,2.93,1.03,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","CCCAATATATGCGCAG",6,39.21,7.87,-2.9,0.3,1.5,1.04,0.03,">1 nonsynonymous","Y91R Y119R S139R C158Y",4
"lib1","SARS-CoV-2","CCCAATATCCTCACGC",3,51.2,10.21,-0.56,0.04,2.89,1.01,0,"1 nonsynonymous","C31E",1
"lib1","SARS-CoV-2","CCCAATATGCGGATTT",4,53.77,9.06,-1.71,0.09,2.86,1.12,0,">1 nonsynonymous","I28Y Y39K N157H P197Y",4
"lib1","SARS-CoV-2","CCCAATATTAACATTT",1,31.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147N",1
"lib1","SARS-CoV-2","CCCAATCACCTCGCTA",10,168.67,10.31,-0.46,0.09,2.51,1.04,0,">1 nonsynonymous","T3V S29C E141R Q163Y",4
"lib1","SARS-CoV-2","CCCAATCAGAGACACC",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q P149L",2
"lib1","SARS-CoV-2","CCCAATCATACCATAA",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F P96W N118G G166T",4
"lib1","SARS-CoV-2","CCCAATCCAACAACCT",5,91.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9L Y35A A81D R179E",4
"lib1","SARS-CoV-2","CCCAATCCCAACCCGA",2,17.59,8.5,-2.26,0.29,1.5,1.14,0.03,">1 nonsynonymous","Y21D P149A",2
"lib1","SARS-CoV-2","CCCAATCGATTAATTT",1,14.79,10.61,-0.15,0.14,2.78,1.11,0.01,"1 nonsynonymous","V32D",1
"lib1","SARS-CoV-2","CCCAATCGTATGGTGG",4,32.33,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A89W T100F",2
"lib1","SARS-CoV-2","CCCAATCTCTGTTTGT",4,33.47,10.67,-0.1,0.07,2.94,1.01,0,">1 nonsynonymous","P7D S41T N64K D98N",4
"lib1","SARS-CoV-2","CCCAATCTGTGATACC",2,12.83,6.46,-4.3,0.5,3,1.39,0.03,">1 nonsynonymous","F70R G117H",2
"lib1","SARS-CoV-2","CCCAATGAAGGTTATA",4,17.18,6.29,-4.47,0.85,1.5,1.18,0.05,">1 nonsynonymous","R27T L95Y",2
"lib1","SARS-CoV-2","CCCAATGACAACAAGT",4,2.45,NA,NA,NA,NA,NA,NA,"stop","K114S Y143*",2
"lib1","SARS-CoV-2","CCCAATGACTGATCAT",2,62.64,10.17,-0.59,0.05,2.92,1.01,0,">1 nonsynonymous","T100F G155I",2
"lib1","SARS-CoV-2","CCCAATGAGGTATTAC",6,57.68,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V71E Y93F",2
"lib1","SARS-CoV-2","CCCAATGATTAAGTGT",3,28.62,10.75,-0.01,0.07,2.97,1,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","CCCAATGGAACACAAA",5,33.51,9.5,-1.26,0.12,1.69,1.09,0.01,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","CCCAATGGCGAATCCA",5,2.46,NA,NA,NA,NA,NA,NA,"stop","G116F N130* E141L T170G T201L",5
"lib1","SARS-CoV-2","CCCAATGGTTAAGATA",3,38.24,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G83S N118T Y175P",3
"lib1","SARS-CoV-2","CCCAATGTAGTTTACG",2,64.37,10.63,-0.13,0.02,2.91,1.02,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","CCCAATGTTACCGAAT",2,19.37,10.79,0.03,0.08,2.85,1.12,0,">1 nonsynonymous","I2R Y66I K198Y",3
"lib1","SARS-CoV-2","CCCAATGTTATGAAAA",3,59.47,10.81,0.04,0.07,2.91,1.05,0,"1 nonsynonymous","N1V",1
"lib1","SARS-CoV-2","CCCAATGTTCGGACCT",12,89,6,-4.76,1.71,1.5,1.23,0.03,">1 nonsynonymous","D98F W106C",2
"lib1","SARS-CoV-2","CCCAATTCGAGACGCG",2,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151M L183Y",2
"lib1","SARS-CoV-2","CCCAATTGAATCACGT",1,29.89,10.85,0.08,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAATTTAATTGGGG",4,53.36,10.74,-0.02,0.07,2.89,1.07,0,"1 nonsynonymous","A18G",1
"lib1","SARS-CoV-2","CCCAATTTAGAGCGCT",4,39.27,10.67,-0.1,0.1,2.87,1.12,0,">1 nonsynonymous","S41A T55E",2
"lib1","SARS-CoV-2","CCCAATTTGACAGAGA",5,8.01,NA,NA,NA,NA,NA,NA,"stop","Y66M P82* D90G L122W R136N",5
"lib1","SARS-CoV-2","CCCAATTTTCTTGATA",3,11.6,9.44,-1.33,0.1,3,1.02,0,">1 nonsynonymous","T3A N40D Y119S",3
"lib1","SARS-CoV-2","CCCACAAAAATCTGTA",1,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38F D59Q D90W F99L A190F",5
"lib1","SARS-CoV-2","CCCACAAAACATATAT",1,7.95,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","L5A Y93W Q144Y",3
"lib1","SARS-CoV-2","CCCACAAAATAATTAA",16,183.37,10.54,-0.22,0.04,2.9,1.02,0,">1 nonsynonymous","I2H D59Q G83S",3
"lib1","SARS-CoV-2","CCCACAAACACCGACA",15,69.16,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V20M C61D A89G N171L",4
"lib1","SARS-CoV-2","CCCACAAAGCGCCTAA",8,32.1,6,-4.76,1.26,1.5,1.19,0.02,">1 nonsynonymous","N1W Y35C V103Q N120G F167K",5
"lib1","SARS-CoV-2","CCCACAACACTCAAAG",3,39.09,7.92,-2.84,0.17,2.08,1.11,0.01,">1 nonsynonymous","S41L K87E F126R",3
"lib1","SARS-CoV-2","CCCACAACATCCTTAA",12,60.59,10.81,0.05,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCACAACCAATCAGG",6,439.82,9.24,-1.52,0.09,2.42,1.11,0,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","CCCACAACCGAGCAAT",11,68.3,10.05,-0.71,0.1,1.95,1.07,0,">1 nonsynonymous","S45Y I138D G155R N171T",4
"lib1","SARS-CoV-2","CCCACAACGGCTGTAG",1,53.52,10.05,-0.72,0.06,2.7,1.01,0,">1 nonsynonymous","L57A T140D",2
"lib1","SARS-CoV-2","CCCACAAGACTGACCG",3,70.01,9.32,-1.45,0.09,2.88,1.09,0,">1 nonsynonymous","T55N T170L",2
"lib1","SARS-CoV-2","CCCACAAGCCCTAAAC",4,26.05,8.7,-2.07,0.24,1.5,1,0.04,">1 nonsynonymous","V103L S147I",2
"lib1","SARS-CoV-2","CCCACAAGGATTTCAA",2,8.64,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P54V Q84N N92L",3
"lib1","SARS-CoV-2","CCCACAATAATTTTAA",2,36.98,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S29E L95Q N120K",3
"lib1","SARS-CoV-2","CCCACAATGACGGACA",2,42.55,9.77,-0.99,0.12,2.03,1.17,0.01,"1 nonsynonymous","W106H",1
"lib1","SARS-CoV-2","CCCACACAAGGACGTT",2,17.74,7.5,-3.26,0.19,1.5,1.06,0.02,">1 nonsynonymous","F62H S69G S147K",3
"lib1","SARS-CoV-2","CCCACACGGCCACCCT",2,0.33,NA,NA,NA,NA,NA,NA,"stop","D68E N110V G116*",3
"lib1","SARS-CoV-2","CCCACACTACCAAAGT",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I V180P",2
"lib1","SARS-CoV-2","CCCACACTGATCCCGG",6,62.63,10.81,0.05,0.07,2.86,1.12,0,">1 nonsynonymous","I28M S139T",2
"lib1","SARS-CoV-2","CCCACACTTAAACCCT",5,113.1,10.31,-0.46,0.04,2.79,1.03,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","CCCACAGAAAATAACA",4,139.6,10.51,-0.26,0.04,2.92,1.03,0,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","CCCACAGCCTTTCCTT",4,0.16,NA,NA,NA,NA,NA,NA,"stop","N58Y P82W K132P V153*",4
"lib1","SARS-CoV-2","CCCACATAAGACGATA",2,31.4,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C6W N107W R136G G152S T201S",5
"lib1","SARS-CoV-2","CCCACATAATGTACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F8D F62S P149*",3
"lib1","SARS-CoV-2","CCCACATCCAAGTTTA",4,70.59,10.18,-0.59,0.05,2.8,1,0,">1 nonsynonymous","Y35S D59L F160N",3
"lib1","SARS-CoV-2","CCCACATGGACCCAGG",3,19.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15A P54T D75T N107R",4
"lib1","SARS-CoV-2","CCCACATGGTCAAAGA",3,49.63,8.78,-1.99,0.16,1.75,1.16,0.01,">1 nonsynonymous","G83V N118M",2
"lib1","SARS-CoV-2","CCCACATTGCGTCCCA",2,4.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82E",1
"lib1","SARS-CoV-2","CCCACCAATCAATATA",4,122.54,10.4,-0.36,0.05,2.91,1,0,">1 nonsynonymous","K56V T100S T201I",3
"lib1","SARS-CoV-2","CCCACCAATGATACAC",14,217.54,9.96,-0.8,0.07,2.23,1.03,0,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","CCCACCACTTATCCCC",3,86.62,10.8,0.04,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCACCAGAATAGACA",9,57.65,6.16,-4.6,0.74,1.5,1.18,0.02,">1 nonsynonymous","S41L V71L Y93S C150P",4
"lib1","SARS-CoV-2","CCCACCATACCACACT",2,42.52,10.51,-0.26,0.04,2.86,1.03,0,">1 nonsynonymous","T3L D34N L122T",3
"lib1","SARS-CoV-2","CCCACCATACCCAGCA",6,57.79,6,-4.76,1.18,1.5,1.16,0.01,">1 nonsynonymous","F8H A33Q F44W L95R T201S",5
"lib1","SARS-CoV-2","CCCACCATCCGGATAC",4,0.36,NA,NA,NA,NA,NA,NA,"stop","C6E V32G S41A V103* I138T F167T A190L",7
"lib1","SARS-CoV-2","CCCACCATTCTCTGTG",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D A33V G146M F160Q F167P",5
"lib1","SARS-CoV-2","CCCACCCAAGCAGTAA",5,67.96,6.8,-3.96,0.52,1.5,1.07,0.04,">1 nonsynonymous","S41W D59S G101I E135V T148K N157I F167H",7
"lib1","SARS-CoV-2","CCCACCCAATTCCCCC",2,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T S43V E76F",3
"lib1","SARS-CoV-2","CCCACCCACGGTAGCA",7,60.37,9.6,-1.17,0.07,2.28,1.07,0,">1 nonsynonymous","I2G S139N P149C F160L",4
"lib1","SARS-CoV-2","CCCACCCACGTGTGGA",10,35.97,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","R73P V103H P197I",3
"lib1","SARS-CoV-2","CCCACCCAGATCCAAG",2,56.88,10.5,-0.26,0.05,2.82,1.07,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","CCCACCCCAATCCAAG",1,26.02,10.09,-0.68,0.12,2.42,1.03,0.01,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","CCCACCCCTGATGAAA",1,33.43,10.57,-0.2,0.09,2.89,1.05,0.01,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","CCCACCCGGCGAAGAT",4,27.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K87E L162P",2
"lib1","SARS-CoV-2","CCCACCCGGTTCAACT",2,67.48,9.28,-1.48,0.1,2.61,1.17,0,">1 nonsynonymous","G9R T55C Q163E",3
"lib1","SARS-CoV-2","CCCACCCTTTATTTCC",3,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E W106I V182R K199E",4
"lib1","SARS-CoV-2","CCCACCGAAACCCACA",12,330.54,8.61,-2.15,0.09,2.71,1.03,0,">1 nonsynonymous","A22G N157M P197S",3
"lib1","SARS-CoV-2","CCCACCTAAAAAATAC",6,72.8,10.75,-0.01,0.09,2.87,1.09,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","CCCACCTACGATCACA",7,71.97,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28G G86S D90L G146I G155C F167C",6
"lib1","SARS-CoV-2","CCCACCTAGACCAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55G C61Y Y91*",3
"lib1","SARS-CoV-2","CCCACCTATCGAAAAC",3,45.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94E F99V Y119T F156Q",4
"lib1","SARS-CoV-2","CCCACCTATGTATCAG",4,88.98,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V11K R78L A89Y P161L T201S",5
"lib1","SARS-CoV-2","CCCACCTCCCAACACT",2,62.43,10.78,0.02,0.07,2.96,1,0,">1 nonsynonymous","G9W K132R",2
"lib1","SARS-CoV-2","CCCACGAAAATTTCGA",1,34,9.79,-0.98,0.14,1.74,1.16,0.01,">1 nonsynonymous","P7S D34G I80L",3
"lib1","SARS-CoV-2","CCCACGAAATGATTCG",1,10.15,8.23,-2.53,0.21,2.31,1.11,0.02,">1 nonsynonymous","A42G N157V",2
"lib1","SARS-CoV-2","CCCACGAGGCTACCCC",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50M W106D E154P Q176L",4
"lib1","SARS-CoV-2","CCCACGATCACTATAT",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G A89H I104M F134I",4
"lib1","SARS-CoV-2","CCCACGATCGCCTATT",8,1.81,NA,NA,NA,NA,NA,NA,"stop","G101S Y121*",2
"lib1","SARS-CoV-2","CCCACGCGACTACGGA",2,11.04,10.69,-0.07,0.34,2.66,1.02,0.02,">1 nonsynonymous","S129A G152V",2
"lib1","SARS-CoV-2","CCCACGCGAGATAGGG",3,23.29,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","L60N A105L F134L",3
"lib1","SARS-CoV-2","CCCACGCTGATGTACC",9,190.56,10.72,-0.04,0.07,2.88,1.08,0,"1 nonsynonymous","N40D",1
"lib1","SARS-CoV-2","CCCACGGACCATTTAG",15,1122.8,8.59,-2.18,0.1,2.8,1.05,0,">1 nonsynonymous","S43A K114G N120M F160S G166W",5
"lib1","SARS-CoV-2","CCCACGGATACACATT",2,27.24,9.48,-1.29,0.1,2.7,1.13,0,">1 nonsynonymous","N4Y T55S N109Y",3
"lib1","SARS-CoV-2","CCCACGGGCTATGTCT",1,69.84,9.26,-1.5,0.07,2.81,1.07,0,">1 nonsynonymous","Y35G T170K",2
"lib1","SARS-CoV-2","CCCACGTATCCCCGTC",4,9.86,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T63L T85H W106E N118L N151K",5
"lib1","SARS-CoV-2","CCCACGTCGCGCGTTT",3,26.48,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D68Q A89G D112L V153M",4
"lib1","SARS-CoV-2","CCCACGTGCATGCGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R F47* T55C",3
"lib1","SARS-CoV-2","CCCACGTTAAATGAGG",4,68.56,10.56,-0.2,0.05,2.93,1.03,0,">1 nonsynonymous","Y66V D97R",2
"lib1","SARS-CoV-2","CCCACGTTATACAAGA",1,14.05,9.36,-1.4,0.14,1.89,1.15,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CCCACTAATTATACCT",2,85.29,10.78,0.01,0.08,2.88,1.09,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","CCCACTAATTTGTTCT",6,1.32,NA,NA,NA,NA,NA,NA,"stop","N13F A105* Y119R",3
"lib1","SARS-CoV-2","CCCACTACAAAGGTTA",1,11.33,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V77W A105S R124K",3
"lib1","SARS-CoV-2","CCCACTACCATCCCTA",12,144.04,9.02,-1.75,0.16,1.54,1.15,0.01,"1 nonsynonymous","R25A",1
"lib1","SARS-CoV-2","CCCACTACCGTTTCTA",3,80.3,10.77,0.01,0.06,2.84,1.04,0,">1 nonsynonymous","R27L F62V",2
"lib1","SARS-CoV-2","CCCACTAGCGTTCACT",10,0.08,NA,NA,NA,NA,NA,NA,"stop","E10* N157Y T201S",3
"lib1","SARS-CoV-2","CCCACTAGTTATATTT",1,11.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K94W E141R",2
"lib1","SARS-CoV-2","CCCACTATCTAGTACA",6,0.39,NA,NA,NA,NA,NA,NA,"stop","R25* S53F",2
"lib1","SARS-CoV-2","CCCACTATCTCTGAGG",7,20.82,6,-4.76,2,1.5,1.25,0.08,">1 nonsynonymous","D98Y I142A F167G",3
"lib1","SARS-CoV-2","CCCACTCAAAGTAACC",5,138.01,6.06,-4.71,0.45,1.5,1.15,0,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CCCACTCACGTACGCC",5,78.15,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S45F N157Q G166V",3
"lib1","SARS-CoV-2","CCCACTCCATGGAATT",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q L125N T201I",3
"lib1","SARS-CoV-2","CCCACTCGAAACTAAC",2,15.78,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","N1S T100P W106E N120C",4
"lib1","SARS-CoV-2","CCCACTCTCAAGATAA",9,79.1,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K56I V77M G86V K128A G146R",5
"lib1","SARS-CoV-2","CCCACTCTGGAAAAAT",2,22.18,10.69,-0.08,0.04,3,1.01,0,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","CCCACTGACTCACAAT",2,31.17,10.79,0.02,0.07,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCACTGGTGGGTCTG",16,221.35,10.6,-0.17,0.04,2.88,1.05,0,">1 nonsynonymous","L122T P149W",2
"lib1","SARS-CoV-2","CCCACTGTAAACCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S36H A42E Y165* G172M V182L S200T",6
"lib1","SARS-CoV-2","CCCACTGTAATGAAAG",3,20.3,6,-4.76,1.09,3,1.1,0,">1 nonsynonymous","W23M W106E",2
"lib1","SARS-CoV-2","CCCACTGTTGAAGCCA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90W A105T",2
"lib1","SARS-CoV-2","CCCACTTAAAAAATCT",1,34.7,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9C D112A",2
"lib1","SARS-CoV-2","CCCACTTGGTGCTCGG",3,64.87,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y159T T170L",2
"lib1","SARS-CoV-2","CCCACTTTGATACACC",4,38.16,9.44,-1.33,0.1,2.71,1.09,0,">1 nonsynonymous","P7H L60K P169S V173Y",4
"lib1","SARS-CoV-2","CCCACTTTTGAAATCA",2,79.02,9.31,-1.45,0.08,2.76,1.11,0,">1 nonsynonymous","G9L K87E",2
"lib1","SARS-CoV-2","CCCAGAAACGAAATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12Y A81* A89N W106R S139T Y178S E186I",7
"lib1","SARS-CoV-2","CCCAGAACAAAATCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M S129L I142N F156S",4
"lib1","SARS-CoV-2","CCCAGAATCTTCGAAT",2,46.62,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K94V Y121K R127C",3
"lib1","SARS-CoV-2","CCCAGAATGCGTTAGG",4,40.42,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","CCCAGAATTAGACGCC",6,141.43,9.52,-1.25,0.1,2.6,1.11,0,">1 nonsynonymous","A18L F156V",2
"lib1","SARS-CoV-2","CCCAGACACAATTAAA",5,20.51,10.8,0.04,0.1,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAGACACGGGGCGG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L K87I D112K K128S D137N",5
"lib1","SARS-CoV-2","CCCAGACCATAACCAA",2,14.71,8.43,-2.34,0.28,1.76,1.2,0.02,"1 nonsynonymous","F12D",1
"lib1","SARS-CoV-2","CCCAGACTATAGAAAA",7,108.53,9.94,-0.83,0.06,2.58,1.08,0,">1 nonsynonymous","T3N F47I N130G G174N",4
"lib1","SARS-CoV-2","CCCAGAGATTTGTAAC",1,6.02,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","Y93P K114C N120L Q168K",4
"lib1","SARS-CoV-2","CCCAGAGGACGGTCCA",1,14.62,6.98,-3.78,0.27,1.5,1.12,0.02,">1 nonsynonymous","A89S F99I Y121L",3
"lib1","SARS-CoV-2","CCCAGAGGATTCTAGC",1,15.54,10.55,-0.21,0.12,2.68,1.03,0.01,">1 nonsynonymous","A22K F44T",2
"lib1","SARS-CoV-2","CCCAGAGGCAATCTAA",4,73.22,10.73,-0.03,0.07,2.91,1.05,0,"1 nonsynonymous","N151D",1
"lib1","SARS-CoV-2","CCCAGAGTACTCACTA",1,42.32,8.73,-2.03,0.1,2.95,1.05,0,">1 nonsynonymous","N4L A33P T170E",3
"lib1","SARS-CoV-2","CCCAGATACTATTCAT",13,182.46,10.81,0.05,0.07,2.9,1.04,0,"1 nonsynonymous","F8W",1
"lib1","SARS-CoV-2","CCCAGATCCACGGAGC",2,8.73,8.99,-1.77,0.32,1.8,1.04,0.05,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","CCCAGATCTAAACAAT",5,11.25,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","T15V N107R S139P Y165I",4
"lib1","SARS-CoV-2","CCCAGATGAATCGTTA",1,24.02,8.84,-1.92,0.09,2.26,1.12,0,">1 nonsynonymous","G74M K114S G196T",3
"lib1","SARS-CoV-2","CCCAGCAATTTATAGT",3,65.62,10.73,-0.03,0.06,2.97,1,0,">1 nonsynonymous","N4R S129N T201F",3
"lib1","SARS-CoV-2","CCCAGCACTTATGTTA",6,46.02,6.56,-4.2,0.53,1.5,1.24,0.03,">1 nonsynonymous","S19N G86F G146V",3
"lib1","SARS-CoV-2","CCCAGCAGAATACACA",1,9.37,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S36E D68R E135Q",3
"lib1","SARS-CoV-2","CCCAGCAGACTAATAT",3,36.78,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5R I28L D34V N110Y R124T S139V F167S G196T",8
"lib1","SARS-CoV-2","CCCAGCAGATACATGG",1,5.96,6.56,-4.2,0.62,1.5,1.16,0.05,"1 nonsynonymous","D68W",1
"lib1","SARS-CoV-2","CCCAGCAGCGTCTTAG",5,47.33,10.58,-0.18,0.1,2.87,1.13,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","CCCAGCCAATGATGCT",8,117.68,10.4,-0.36,0.04,2.93,1.01,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","CCCAGCCACAGTTAGG",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R D98R N110Q",3
"lib1","SARS-CoV-2","CCCAGCCAGAATGCAT",4,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N P96Y S147L",3
"lib1","SARS-CoV-2","CCCAGCCGGAAACACG",10,94.1,9.98,-0.78,0.06,2.46,1.04,0,">1 nonsynonymous","T3A C31W V37Y K198L",4
"lib1","SARS-CoV-2","CCCAGCGATTTTCTGC",7,51.07,6.37,-4.39,0.62,1.5,1.22,0.03,">1 nonsynonymous","R73I T140P",2
"lib1","SARS-CoV-2","CCCAGCGGAACTATAG",7,102.06,10.77,0,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCAGCGTTGAAATAT",1,9.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R16C A42Y F167V",3
"lib1","SARS-CoV-2","CCCAGCTACGGACGGG",2,9.61,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18K T46N K56L C61G P96M",5
"lib1","SARS-CoV-2","CCCAGCTCATAATTTG",3,55.37,10.58,-0.19,0.08,2.94,1.02,0,"1 nonsynonymous","P7G",1
"lib1","SARS-CoV-2","CCCAGCTGCAGAGAAA",2,26.19,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T55L G83P K94V P161L",4
"lib1","SARS-CoV-2","CCCAGGAACAATAAGG",3,32.58,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","Q84G Y91F A105E E141N",4
"lib1","SARS-CoV-2","CCCAGGAACACCTAAG",3,15.68,6,-4.76,1.65,1.5,1.12,0.01,">1 nonsynonymous","L5M D68G",2
"lib1","SARS-CoV-2","CCCAGGAACGAAAACA",1,3.23,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCCAGGAAGGCCCGTG",5,66.12,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35D Y39Q C158V P169L P177A",5
"lib1","SARS-CoV-2","CCCAGGACCTCTTCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45L A81* G101Y T148D",4
"lib1","SARS-CoV-2","CCCAGGACGTGTACTT",1,13.03,10.39,-0.37,0.13,2.7,1.05,0.01,">1 nonsynonymous","I88V A89S",2
"lib1","SARS-CoV-2","CCCAGGACTTTATGCT",1,1.53,NA,NA,NA,NA,NA,NA,"stop","N1* V37L F47L C61R P82K N107P N171I",7
"lib1","SARS-CoV-2","CCCAGGATATTGAAAA",7,68.57,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V37N N64Y R73F K94H",4
"lib1","SARS-CoV-2","CCCAGGCACGAACATA",7,22.76,9.62,-1.15,0.12,1.89,1.03,0.01,">1 nonsynonymous","D59Y I80M",2
"lib1","SARS-CoV-2","CCCAGGCCTAACAATA",4,110.13,8.34,-2.42,0.15,1.5,1.17,0.01,">1 nonsynonymous","S19Y S29R",2
"lib1","SARS-CoV-2","CCCAGGCTCTGATTTA",6,35.62,7.14,-3.63,0.3,1.5,1.25,0.03,">1 nonsynonymous","F47L E76K",2
"lib1","SARS-CoV-2","CCCAGGCTTTAAACGA",5,48.2,10.05,-0.72,0.1,2.3,1.01,0,">1 nonsynonymous","G51D D97S T148R",3
"lib1","SARS-CoV-2","CCCAGGGAAACGTCTT",8,158.93,7.66,-3.1,0.12,1.5,1.08,0,">1 nonsynonymous","G9K T15G F62S Y175S A190S",5
"lib1","SARS-CoV-2","CCCAGGGTCCTTCTGA",2,20.57,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S29T K94G R124S G166P",4
"lib1","SARS-CoV-2","CCCAGGTAACATACAA",1,12.95,9.39,-1.38,0.23,1.86,1.09,0.03,">1 nonsynonymous","P7G L57D N157S",3
"lib1","SARS-CoV-2","CCCAGGTAACATATGA",7,111.16,10.34,-0.42,0.04,2.86,1,0,"1 nonsynonymous","C102I",1
"lib1","SARS-CoV-2","CCCAGTAAACCCACTT",4,85.53,8.31,-2.45,0.16,2.27,1.12,0.01,">1 nonsynonymous","G155A Q176S",2
"lib1","SARS-CoV-2","CCCAGTAAAGCTTAAA",5,32.1,10.22,-0.54,0.09,2.71,1.07,0,">1 nonsynonymous","N13K N110V V153M",3
"lib1","SARS-CoV-2","CCCAGTAACATTCTTT",2,2.56,NA,NA,NA,NA,NA,NA,"stop","G83* K114R L122V Y143L",4
"lib1","SARS-CoV-2","CCCAGTAGTTCTTTTG",6,166.07,8.87,-1.9,0.07,2.85,1.09,0,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","CCCAGTATAAGAGGAC",2,21.71,8.25,-2.51,0.37,1.5,1.22,0.06,">1 nonsynonymous","N30V A42T K56A C61V D98Y",5
"lib1","SARS-CoV-2","CCCAGTCAAATCTTTG",3,47.35,10.92,0.15,0.09,2.85,1.11,0,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","CCCAGTCACACAATAA",3,0.41,NA,NA,NA,NA,NA,NA,"stop","Y91W R124* Q176A",3
"lib1","SARS-CoV-2","CCCAGTCGTATATAAC",3,55.3,10.64,-0.12,0.07,2.9,1.02,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","CCCAGTGATTTCTAAG",3,71.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28V T100P N151I",3
"lib1","SARS-CoV-2","CCCAGTGCGGTTTTAT",10,151,9.45,-1.32,0.09,2.64,1.11,0,">1 nonsynonymous","A22N S41T D90A Y119R",4
"lib1","SARS-CoV-2","CCCAGTGTTACGCACA",3,54.74,10.03,-0.73,0.13,2.28,1,0.01,">1 nonsynonymous","F47L L60I E135D",3
"lib1","SARS-CoV-2","CCCAGTTTCCTTGATC",2,1.02,NA,NA,NA,NA,NA,NA,"stop","S29* K48S T100I V115P L122K",5
"lib1","SARS-CoV-2","CCCATAAAGTCCCTAA",1,16.18,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D90P D137R T201K",3
"lib1","SARS-CoV-2","CCCATAAATTATATAT",1,34.26,10.38,-0.39,0.05,2.95,1.05,0,">1 nonsynonymous","S41W P149Y A190S",3
"lib1","SARS-CoV-2","CCCATAACACCCTAAA",4,117.41,10.73,-0.03,0.07,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCATAACAGAGAATA",3,26.6,6,-4.76,2,1.5,1.23,0.08,">1 nonsynonymous","F8Q Y91D D97L C195Y",4
"lib1","SARS-CoV-2","CCCATAACAGGCAACA",4,22.16,9.9,-0.87,0.14,2.64,1.01,0.01,"1 nonsynonymous","Y21I",1
"lib1","SARS-CoV-2","CCCATAACCTCATTAT",3,13.4,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F47A F99S",2
"lib1","SARS-CoV-2","CCCATAACGACAATCC",3,37.15,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V103M G152K Q176R",3
"lib1","SARS-CoV-2","CCCATAAGTTAATCCT",1,62.21,10.02,-0.74,0.08,2.35,1.07,0,">1 nonsynonymous","R27W C61F S129Y",3
"lib1","SARS-CoV-2","CCCATAATAGTAAATC",1,5.04,10.6,-0.16,0.2,2.78,1,0.02,">1 nonsynonymous","L5Y I28L P149L",3
"lib1","SARS-CoV-2","CCCATAATATTATTTA",5,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N A22P A105D",3
"lib1","SARS-CoV-2","CCCATAATGACCACGA",3,0,NA,NA,NA,NA,NA,NA,"stop","C61* P96D V115Y T148I",4
"lib1","SARS-CoV-2","CCCATAATTTTGTTAC",4,63.25,10.06,-0.71,0.06,2.86,1,0,">1 nonsynonymous","L5Q Q144L",2
"lib1","SARS-CoV-2","CCCATACAATAATAGA",3,5.6,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","W106L T148M V182G",3
"lib1","SARS-CoV-2","CCCATACCATATTGGT",9,134.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3K E10T W23R T46L Q144S Y159T",6
"lib1","SARS-CoV-2","CCCATACCCAGGCTGC",3,33.81,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F17M G86K G146L",3
"lib1","SARS-CoV-2","CCCATACCTATTAAAA",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S G101S K114R P169M",4
"lib1","SARS-CoV-2","CCCATACCTTGTCGGT",3,33.78,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9A Y93R",2
"lib1","SARS-CoV-2","CCCATACGAATTGAAA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L K48Q T63R Y91D P149W P191L",6
"lib1","SARS-CoV-2","CCCATACGTAGACAAA",2,45.99,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R16V R27S Y39C Y119G N157I L188C",6
"lib1","SARS-CoV-2","CCCATACGTCGCTTAT",3,52.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77Q N109T P149Q V173A",4
"lib1","SARS-CoV-2","CCCATACTAACACTCG",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W D34H T201S",3
"lib1","SARS-CoV-2","CCCATACTATTCAAAC",5,130.19,8.57,-2.19,0.1,2.68,1.07,0,">1 nonsynonymous","L5G D90R G166Y",3
"lib1","SARS-CoV-2","CCCATACTTGAGGCTA",8,55.44,6.1,-4.67,0.68,1.5,1.18,0.01,">1 nonsynonymous","W23F D112L K128G P149A",4
"lib1","SARS-CoV-2","CCCATAGAACCGGGAT",4,29.74,6.32,-4.44,0.33,1.5,1.12,0.01,">1 nonsynonymous","P161R K198G",2
"lib1","SARS-CoV-2","CCCATAGCATTTGCAA",11,65.45,10.31,-0.46,0.04,2.94,1.02,0,">1 nonsynonymous","V37W F47S",2
"lib1","SARS-CoV-2","CCCATAGCCACTGGCA",15,152.71,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41T Y66K D97F G116Q P177S",5
"lib1","SARS-CoV-2","CCCATAGTACCGTTAA",1,13.49,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","F12H A18M D97H F156S",4
"lib1","SARS-CoV-2","CCCATAGTAGGCAATC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F F167V",2
"lib1","SARS-CoV-2","CCCATATAAAAAAGAT",5,31.63,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C49R T55F I88D P133R",4
"lib1","SARS-CoV-2","CCCATATAGAGCAAAC",6,54.71,9.68,-1.09,0.14,1.99,1.09,0.01,"1 nonsynonymous","A89M",1
"lib1","SARS-CoV-2","CCCATATATCTGAAAA",2,22.99,9.64,-1.13,0.2,1.88,1.25,0.03,">1 nonsynonymous","N13D C61S T85L S129Q",4
"lib1","SARS-CoV-2","CCCATATATTCAAACT",2,6.34,7.63,-3.14,0.21,1.86,1.08,0.01,">1 nonsynonymous","C6R V11T T55F T201Q",4
"lib1","SARS-CoV-2","CCCATATGCTGGCCTT",5,102.1,10.22,-0.54,0.07,2.87,1,0,">1 nonsynonymous","C6Y P197R",2
"lib1","SARS-CoV-2","CCCATATTAAACACCA",11,57.56,6.21,-4.56,0.95,1.5,1.25,0.03,">1 nonsynonymous","L5C N107T S113T",3
"lib1","SARS-CoV-2","CCCATCACAAATATCG",2,18.16,9.79,-0.98,0.06,2.76,1.08,0,">1 nonsynonymous","C61Q G152F F160V",3
"lib1","SARS-CoV-2","CCCATCACCAGTACAT",9,86.23,10.75,-0.02,0.04,2.96,1,0,"1 nonsynonymous","T148M",1
"lib1","SARS-CoV-2","CCCATCACTCTAGTGT",2,18.22,10.56,-0.2,0.06,2.85,1.09,0,">1 nonsynonymous","D59G I138R",2
"lib1","SARS-CoV-2","CCCATCAGAGATAAAG",2,70.86,10.72,-0.05,0.05,2.86,1.06,0,"1 nonsynonymous","H189R",1
"lib1","SARS-CoV-2","CCCATCAGTATATAAC",2,18.49,6.62,-4.14,0.21,2.32,1.12,0.01,">1 nonsynonymous","K94S N157V",2
"lib1","SARS-CoV-2","CCCATCATAATATAAG",5,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R A105Q",2
"lib1","SARS-CoV-2","CCCATCATACACTTAA",5,49.24,9.71,-1.05,0.15,1.92,1.15,0.01,">1 nonsynonymous","G9S R27L Y39A T63Q Y123T",5
"lib1","SARS-CoV-2","CCCATCCACAACTGTC",10,215.94,9.75,-1.01,0.09,1.96,1.07,0,">1 nonsynonymous","G83V G152Y",2
"lib1","SARS-CoV-2","CCCATCCATAACATGT",5,40.97,6.1,-4.67,1.06,1.5,1.25,0.03,">1 nonsynonymous","K48L L60G Q84H D98F I138V",5
"lib1","SARS-CoV-2","CCCATCCATGGAATCG",5,38.05,9.78,-0.98,0.13,1.88,1.07,0.01,">1 nonsynonymous","A89H D98S",2
"lib1","SARS-CoV-2","CCCATCCTTTACACCG",1,18.7,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","C6R S19M R27A N64L R127M S139K P149S F156L L187H",9
"lib1","SARS-CoV-2","CCCATCGACTACTAAA",2,216.57,10.73,-0.04,0.06,2.91,1.05,0,"1 nonsynonymous","I138V",1
"lib1","SARS-CoV-2","CCCATCGCTAATACAA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","R27F D97Y W106* K114S",4
"lib1","SARS-CoV-2","CCCATCGGTAAATGAT",2,70.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S36L S129G T148Y G172R",4
"lib1","SARS-CoV-2","CCCATCTACAAGTAAA",4,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F A81V G86D Y93V N118F Q144E F167L V180D",8
"lib1","SARS-CoV-2","CCCATCTACAGCATCC",2,0.63,NA,NA,NA,NA,NA,NA,"stop","I72Y P82* F160W P177C",4
"lib1","SARS-CoV-2","CCCATCTATTTCTACT",6,60.38,8.57,-2.19,0.24,1.5,1.12,0.02,">1 nonsynonymous","G86D L111K",2
"lib1","SARS-CoV-2","CCCATCTATTTTAGAG",3,70.39,6.02,-4.74,0.69,1.5,1.14,0.01,"1 nonsynonymous","Y175G",1
"lib1","SARS-CoV-2","CCCATCTATTTTAGGA",3,41.3,10.42,-0.35,0.08,2.81,1.13,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CCCATCTGGCTTGGCA",12,160.42,10.12,-0.65,0.05,2.94,1,0,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","CCCATCTTCACATTCC",1,31.64,6,-4.76,1.61,1.5,1.18,0.03,">1 nonsynonymous","Y35W F44P Y66L D97H V182N",5
"lib1","SARS-CoV-2","CCCATCTTCGGTTAAC",9,3.76,NA,NA,NA,NA,NA,NA,"stop","V103K L131A I142S P161*",4
"lib1","SARS-CoV-2","CCCATCTTTAATTTGC",4,104.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10S F17A T63A G146M F160M",5
"lib1","SARS-CoV-2","CCCATGAAAGCGGTAC",1,10.11,10.56,-0.2,0.12,2.93,1.07,0.01,">1 nonsynonymous","G9D N110H T201M",3
"lib1","SARS-CoV-2","CCCATGAAATGCAGAG",3,59.19,10.8,0.04,0.08,2.9,1.03,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CCCATGAAATGCCGAC",2,41.08,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F70K T170W",2
"lib1","SARS-CoV-2","CCCATGAACCTTGGGA",1,6.32,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V52F C61T I80P G86N F167C T201E",6
"lib1","SARS-CoV-2","CCCATGAATCTAACAC",2,28.29,10.71,-0.06,0.07,2.9,1.04,0,">1 nonsynonymous","T3S L111H",2
"lib1","SARS-CoV-2","CCCATGAATGTACATA",3,30.6,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5M E10W I88S T100W C150N",5
"lib1","SARS-CoV-2","CCCATGACTACCAAAA",5,67.92,10.48,-0.28,0.08,2.84,1.05,0,">1 nonsynonymous","Q84R D90K",2
"lib1","SARS-CoV-2","CCCATGACTGTAATCA",2,42.58,8.87,-1.9,0.18,1.5,1.16,0.02,">1 nonsynonymous","G9E F44Y L131S",3
"lib1","SARS-CoV-2","CCCATGATAACTTAAA",3,45.71,8.91,-1.86,0.11,2.8,1.12,0.01,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","CCCATGATACCGTGTT",1,52.97,10.77,0.01,0.09,2.84,1.12,0,">1 nonsynonymous","I2C E154S T201G",3
"lib1","SARS-CoV-2","CCCATGATCACGCCTT",19,227.36,10.72,-0.05,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCATGATGTAAAACA",9,18.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34H Y91D T100W",3
"lib1","SARS-CoV-2","CCCATGCAACATAGCC",4,182.67,9.21,-1.55,0.06,2.64,1.1,0,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","CCCATGGTCATCTCCA",3,44.13,6.07,-4.69,1.03,1.5,1.18,0.02,">1 nonsynonymous","Y35I D98M Y123A G155S L162Q",5
"lib1","SARS-CoV-2","CCCATGTAAAAGCAGA",2,31.71,8.92,-1.85,0.26,1.5,1,0.03,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","CCCATGTAATCCCCTT",6,22.26,8.82,-1.94,0.27,1.79,1.13,0.03,">1 nonsynonymous","F47R N64R P169V",3
"lib1","SARS-CoV-2","CCCATTAAATCAAGAT",2,10.72,10.6,-0.17,0.07,2.94,1,0,">1 nonsynonymous","N13R A33W",2
"lib1","SARS-CoV-2","CCCATTAAATTGCGAC",5,91.3,10.1,-0.67,0.07,2.51,1.05,0,">1 nonsynonymous","N4Q D112I",2
"lib1","SARS-CoV-2","CCCATTAAGACACAGA",3,36.52,10.21,-0.56,0.13,2.69,1.02,0.01,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","CCCATTAAGTGCAATC",12,134.47,7.2,-3.56,0.18,1.5,1.13,0.01,">1 nonsynonymous","T85L R124K G174N",3
"lib1","SARS-CoV-2","CCCATTACCATGTAAA",7,104.45,8.36,-2.41,0.23,1.56,1.13,0.02,">1 nonsynonymous","T46C N157T L187C",3
"lib1","SARS-CoV-2","CCCATTACCCCTAATA",6,36.77,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","L57A D112F K199I",3
"lib1","SARS-CoV-2","CCCATTACCGATGCAT",1,24.14,6.44,-4.32,0.43,1.5,1.19,0.02,">1 nonsynonymous","N58R D68R D90C L162N N171G",5
"lib1","SARS-CoV-2","CCCATTATGTAGACCA",1,6.84,6,-4.76,2,3,1.06,0,">1 nonsynonymous","F8P I138L R179G",3
"lib1","SARS-CoV-2","CCCATTATTGTATAGG",1,27.72,10.4,-0.36,0.05,2.97,1,0,">1 nonsynonymous","A14S D59K",2
"lib1","SARS-CoV-2","CCCATTCAACCACTTG",6,121.49,10.75,-0.02,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCATTCAATAATCGA",1,41.85,10.57,-0.2,0.07,2.86,1.08,0,"1 nonsynonymous","F134S",1
"lib1","SARS-CoV-2","CCCATTCAATTATTCG",5,57.03,10.46,-0.31,0.06,2.88,1.03,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","CCCATTCGGGCAAGCA",2,12.09,6,-4.76,1.15,1.5,1.09,0.01,">1 nonsynonymous","N13R C158Q F167S",3
"lib1","SARS-CoV-2","CCCATTCGTGACAATG",6,82.23,8.76,-2.01,0.07,2.78,1.09,0,">1 nonsynonymous","G9D D112M L125M T148E",4
"lib1","SARS-CoV-2","CCCATTCTCGCACGAT",1,15.07,9.83,-0.93,0.14,2.7,1.03,0.01,">1 nonsynonymous","V11P Y35L",2
"lib1","SARS-CoV-2","CCCATTCTCGCGCTAC",5,16.99,10.96,0.19,0.1,2.93,1,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","CCCATTCTGTAGGTCT",1,10.36,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A81V L95C F156K G166T",4
"lib1","SARS-CoV-2","CCCATTGATCTGCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A14I L57G Y91* T201*",4
"lib1","SARS-CoV-2","CCCATTGCTCGCTTAT",16,265.44,10.81,0.04,0.06,2.9,1.06,0,"1 nonsynonymous","K198R",1
"lib1","SARS-CoV-2","CCCATTGTCATACCTG",6,43.44,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","F70K",1
"lib1","SARS-CoV-2","CCCATTTACATTACGG",4,12.44,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","I104A D137L K199I",3
"lib1","SARS-CoV-2","CCCATTTATCTAGAAG",9,81.79,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E135S G146L N171K",3
"lib1","SARS-CoV-2","CCCATTTCAAGCCTTC",3,0.25,NA,NA,NA,NA,NA,NA,"stop","C49F L95V G116*",3
"lib1","SARS-CoV-2","CCCATTTGCCGAAAAC",2,24.89,6.42,-4.35,0.51,1.5,1.26,0.02,"1 nonsynonymous","V71E",1
"lib1","SARS-CoV-2","CCCATTTTATGGCACA",4,42.15,10.13,-0.63,0.09,1.93,1.06,0,">1 nonsynonymous","L5W A105K N110H N171F",4
"lib1","SARS-CoV-2","CCCATTTTGAATACCC",4,55.34,10.84,0.08,0.05,2.91,1.03,0,"1 nonsynonymous","K132G",1
"lib1","SARS-CoV-2","CCCCAAAAAACAACGG",4,37.26,10.67,-0.09,0.1,2.93,1.02,0,">1 nonsynonymous","A22R N64L N171T",3
"lib1","SARS-CoV-2","CCCCAAAAAATTACTG",2,39.97,10.67,-0.09,0.05,2.92,1.04,0,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","CCCCAAAAAGTAAACA",5,21.06,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","E10W Y39K Y50S Y121T",4
"lib1","SARS-CoV-2","CCCCAAAAATTCAAAA",1,14.38,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","I2S A22P",2
"lib1","SARS-CoV-2","CCCCAAAATAGAGGTT",1,14.39,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","R25S L131K G174A",3
"lib1","SARS-CoV-2","CCCCAAACCAGTGGTT",3,11.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F47G R136Q",2
"lib1","SARS-CoV-2","CCCCAAACCATCATTA",2,29.05,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","W23K N109L V115S F185N",4
"lib1","SARS-CoV-2","CCCCAAACCTGGCCAT",3,22.54,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","G101F P133G",2
"lib1","SARS-CoV-2","CCCCAAAGATCCCAGC",4,23.89,10.62,-0.14,0.09,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCAAAGTCCGGAGG",5,53.79,9.72,-1.05,0.09,1.86,1.09,0,">1 nonsynonymous","A14C D98E A105T",3
"lib1","SARS-CoV-2","CCCCAAAGTGGACTCG",2,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L F17L W106P",3
"lib1","SARS-CoV-2","CCCCAAATATTGCACC",3,113.63,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12I F47V A89H R136E T140M",5
"lib1","SARS-CoV-2","CCCCAAATCCGCTCGC",3,18.29,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89I P96I W106C I138S",4
"lib1","SARS-CoV-2","CCCCAAATTTTACAGT",5,149.21,10.68,-0.08,0.07,2.87,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCCCAACATTTCGTAA",2,36.81,9.83,-0.93,0.07,2.76,1.08,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","CCCCAACCAAGACCAA",2,5.35,9.09,-1.67,0.39,1.5,1,0.05,">1 nonsynonymous","L5H I28E S184C T201K",4
"lib1","SARS-CoV-2","CCCCAACGTGCAATGA",7,26.42,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A18L N107I S113L L122K S139V V173C",6
"lib1","SARS-CoV-2","CCCCAACTGATCCGCA",2,15.61,10.84,0.07,0.08,2.97,1.03,0,">1 nonsynonymous","N1S D98N",2
"lib1","SARS-CoV-2","CCCCAAGAAATATAAG",1,2.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101Q",1
"lib1","SARS-CoV-2","CCCCAAGACTAGATGG",5,12.91,8.72,-2.05,0.17,1.91,1.07,0.01,">1 nonsynonymous","D90F N120F N151I",3
"lib1","SARS-CoV-2","CCCCAAGAGATTAAAT",7,86.87,10.68,-0.08,0.09,2.74,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCAAGAGCATTAGC",9,45.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14W N120F G146L",3
"lib1","SARS-CoV-2","CCCCAAGCTTAATAAA",2,6.29,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","A33L Y39F K94E Y119S",4
"lib1","SARS-CoV-2","CCCCAAGGCCATAAAA",4,33.37,6,-4.76,1.04,1.5,1.13,0.01,">1 nonsynonymous","T46P D98G I142K C150T",4
"lib1","SARS-CoV-2","CCCCAAGGTAACGGTA",2,7.06,6,-4.76,2,1.5,1.48,0.07,">1 nonsynonymous","T3A S19K C49R",3
"lib1","SARS-CoV-2","CCCCAAGGTACGATAA",7,116.68,10.25,-0.51,0.05,2.65,1.01,0,">1 nonsynonymous","R25T F160K",2
"lib1","SARS-CoV-2","CCCCAAGGTTTCTGAA",7,39.82,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G86I C150Y",2
"lib1","SARS-CoV-2","CCCCAATAACCGAAAT",4,59.74,10.23,-0.54,0.05,2.77,1,0,">1 nonsynonymous","N1Y E10L",2
"lib1","SARS-CoV-2","CCCCAATAGTAGTCCT",4,56.67,10.66,-0.11,0.06,2.91,1.06,0,">1 nonsynonymous","C61A L125M",2
"lib1","SARS-CoV-2","CCCCAATCATAATGCA",2,9.85,6.38,-4.38,0.69,1.59,1.04,0.01,">1 nonsynonymous","K94M G172M",2
"lib1","SARS-CoV-2","CCCCAATCTTAAGAAT",4,13.16,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C6N A14V P149L L183A",4
"lib1","SARS-CoV-2","CCCCAATTACTCAGTT",5,68.28,10.8,0.03,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCAATTATGAGCTG",3,84.4,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F44I R73V P149E Q176R",4
"lib1","SARS-CoV-2","CCCCAATTCGTTTTAA",8,168.77,10.76,0,0.07,2.89,1.07,0,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","CCCCAATTCTCAACAT",5,25.48,6,-4.76,2,3,1.36,0.01,">1 nonsynonymous","W23L N58S Y143R C158Q",4
"lib1","SARS-CoV-2","CCCCACAAGAATATAA",2,20.24,6.52,-4.24,0.51,1.64,1.1,0.02,">1 nonsynonymous","D68T V103N G117S G166V G174K",5
"lib1","SARS-CoV-2","CCCCACAAGTAAAACC",1,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W C61K T140L",3
"lib1","SARS-CoV-2","CCCCACAGGACGATTC",6,77.88,8.71,-2.06,0.09,2.6,1.11,0,">1 nonsynonymous","Y35E Y119K",2
"lib1","SARS-CoV-2","CCCCACCAGGGCATGC",1,27.55,9.05,-1.71,0.3,1.5,1,0.05,">1 nonsynonymous","L5Q D34K D90I",3
"lib1","SARS-CoV-2","CCCCACCCGAACACAT",7,113.67,9.36,-1.41,0.08,2.51,1.13,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","CCCCACCCTATGCGCT",4,10.93,6,-4.76,0.66,3,1.15,0,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","CCCCACCGAACAGATG",6,20.69,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y93P S129M P191W T201P",4
"lib1","SARS-CoV-2","CCCCACCTAACGCGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","N4S D59A Q84* G152F",4
"lib1","SARS-CoV-2","CCCCACGAAAGCAATC",4,36.21,9.67,-1.1,0.12,2.54,1.1,0,">1 nonsynonymous","C6G N120W",2
"lib1","SARS-CoV-2","CCCCACGCAAAAGAGA",11,166.5,10.64,-0.13,0.03,2.88,1.03,0,"1 nonsynonymous","S45A",1
"lib1","SARS-CoV-2","CCCCACGGAATAATGA",1,8.6,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","L57P T63N I104E Q163M",4
"lib1","SARS-CoV-2","CCCCACTACGTCAAAG",6,122.6,10.64,-0.12,0.03,2.94,1.02,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","CCCCACTATATCACGC",4,119.92,10.81,0.05,0.07,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCACTCATACGGCG",2,0.64,NA,NA,NA,NA,NA,NA,"stop","F12R Y39A Q84C K94P V103R R127* K198T",7
"lib1","SARS-CoV-2","CCCCACTGCACCGGTA",2,53.59,10.63,-0.13,0.08,2.87,1.1,0,">1 nonsynonymous","L5A A42G",2
"lib1","SARS-CoV-2","CCCCAGAATGCCCACA",2,78.73,10.52,-0.24,0.05,2.9,1.04,0,"1 nonsynonymous","G174P",1
"lib1","SARS-CoV-2","CCCCAGAATGGATACG",14,7.53,NA,NA,NA,NA,NA,NA,"stop","G9I S45C Y91S Y119*",4
"lib1","SARS-CoV-2","CCCCAGACCACAGTTA",1,14.35,10.65,-0.11,0.13,2.71,1.15,0.01,">1 nonsynonymous","T63R G196V",2
"lib1","SARS-CoV-2","CCCCAGATCCCTAAAC",2,1.33,NA,NA,NA,NA,NA,NA,"stop","Y50L F134*",2
"lib1","SARS-CoV-2","CCCCAGATTAACTCTG",5,193.62,10.59,-0.17,0.04,2.94,1.02,0,">1 nonsynonymous","V37S Y178W",2
"lib1","SARS-CoV-2","CCCCAGCAAATGGGAC",1,0.08,NA,NA,NA,NA,NA,NA,"stop","I2* A81S K132R V173L",4
"lib1","SARS-CoV-2","CCCCAGCACGAGCTGA",2,30.5,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N64R G83I R136M G152S",4
"lib1","SARS-CoV-2","CCCCAGGATTAATTGC",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126L D137F",2
"lib1","SARS-CoV-2","CCCCAGGGAACCGCCA",8,7.52,NA,NA,NA,NA,NA,NA,"stop","N24S F44D V103* R127N Y143W V180S S200V",7
"lib1","SARS-CoV-2","CCCCAGGTATCAATAA",3,1.47,NA,NA,NA,NA,NA,NA,"stop","D90* A105K E186D",3
"lib1","SARS-CoV-2","CCCCAGGTATCTTATA",4,43.36,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","G51C F167Y",2
"lib1","SARS-CoV-2","CCCCAGGTCAATAAAG",3,34.66,10.17,-0.6,0.11,2.47,1.07,0.01,"1 nonsynonymous","P82V",1
"lib1","SARS-CoV-2","CCCCAGGTCTTCAACT",5,19.08,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","C49A S113C",2
"lib1","SARS-CoV-2","CCCCAGGTGCGGCGCA",2,23.86,8.3,-2.46,0.21,2.63,1.15,0.02,">1 nonsynonymous","C61Y L125D",2
"lib1","SARS-CoV-2","CCCCAGTCATACAAGC",3,66.68,10.76,0,0.05,2.9,1.06,0,">1 nonsynonymous","T3S A33F K128M",3
"lib1","SARS-CoV-2","CCCCAGTGCCATCTAA",7,1.36,NA,NA,NA,NA,NA,NA,"stop","N1G S45I A81* F99G",4
"lib1","SARS-CoV-2","CCCCAGTTTTCCAAGA",3,27.23,9.94,-0.82,0.05,2.22,1.03,0,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","CCCCAGTTTTGACCAT",7,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L D75K Q144R L183T",4
"lib1","SARS-CoV-2","CCCCATAAGATTACAA",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S P82Y A89R",3
"lib1","SARS-CoV-2","CCCCATAATGAAATTA",2,12.79,10.79,0.03,0.11,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCATACAACCATTA",5,91.43,7.32,-3.45,0.16,1.58,1.14,0.01,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","CCCCATAGCCAGGTGC",2,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D Q163G S200I",3
"lib1","SARS-CoV-2","CCCCATAGGTGGAAAG",2,28.65,10.88,0.11,0.08,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCATATATAGCCAC",5,23.61,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F134A C158R V181N",3
"lib1","SARS-CoV-2","CCCCATATATCGAAAT",2,10.73,9.78,-0.98,0.08,3,1.05,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","CCCCATATCCCGATTA",6,102.15,10.51,-0.25,0.12,2.74,1.14,0.01,"1 nonsynonymous","S43D",1
"lib1","SARS-CoV-2","CCCCATATGCCTTGAT",6,39.15,10.71,-0.05,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCATATGTAGCAGG",9,129.23,9.12,-1.64,0.07,2.87,1.1,0,"1 nonsynonymous","G166K",1
"lib1","SARS-CoV-2","CCCCATCATCCAGCAA",10,71.5,10.06,-0.7,0.09,2.56,1.03,0,">1 nonsynonymous","D90H P149C",2
"lib1","SARS-CoV-2","CCCCATCCCAATTTCT",6,46.67,6.31,-4.46,0.66,1.5,1.13,0.03,">1 nonsynonymous","L60V D90M G117Y G155S",4
"lib1","SARS-CoV-2","CCCCATGAAACATGTA",4,37.54,10.75,-0.02,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCATGCATGAGAGT",1,18.25,10.9,0.13,0.07,2.96,1,0,">1 nonsynonymous","N24E D98E",2
"lib1","SARS-CoV-2","CCCCATGCCATATCAG",5,71.79,10.79,0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCATTCAACATCGT",2,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A Y21L A33Y T63S A89G",5
"lib1","SARS-CoV-2","CCCCCAAACGGATTAA",4,28.35,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T46S C61P D137H Q168N K199I",5
"lib1","SARS-CoV-2","CCCCCAAGACATTTCG",5,63.72,10.02,-0.74,0.11,2,1.07,0,">1 nonsynonymous","C61L P96C",2
"lib1","SARS-CoV-2","CCCCCACATTGCGCAA",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C T100M N107M F160Y",4
"lib1","SARS-CoV-2","CCCCCACCAGCCTGAT",2,84.49,8.13,-2.64,0.21,1.74,1.15,0.02,">1 nonsynonymous","K56Y F134Q E141V N157E",4
"lib1","SARS-CoV-2","CCCCCACGTAATGGGG",2,49.81,6,-4.76,2,3,1.18,0,">1 nonsynonymous","S29K Y50L G86M D112A S139N",5
"lib1","SARS-CoV-2","CCCCCACTTACGACCG",8,1.76,NA,NA,NA,NA,NA,NA,"stop","Y35P D97* S113E",3
"lib1","SARS-CoV-2","CCCCCAGGCAAGCGCA",10,3.68,NA,NA,NA,NA,NA,NA,"stop","T55L Y119* F185A",3
"lib1","SARS-CoV-2","CCCCCATAACCACGGC",6,20.56,6.05,-4.71,1.44,1.5,1.2,0.06,">1 nonsynonymous","F44S F99S T201H",3
"lib1","SARS-CoV-2","CCCCCATATAACGTTA",6,63,10.53,-0.23,0.04,2.96,1,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","CCCCCATATCGCCATC",3,56.56,10.12,-0.64,0.09,2.59,1.03,0,">1 nonsynonymous","L60N K94N",2
"lib1","SARS-CoV-2","CCCCCATATTGCTCAA",5,74.08,6.81,-3.96,0.64,1.5,1.18,0.05,">1 nonsynonymous","I2V C61H Y175P",3
"lib1","SARS-CoV-2","CCCCCATCAGGTGCTG",1,54.21,9.7,-1.07,0.12,2,1.1,0.01,">1 nonsynonymous","N24S L38F T46H Y91R G174N A190P",6
"lib1","SARS-CoV-2","CCCCCATCATGACTAG",2,24.92,8.66,-2.11,0.18,1.53,1.22,0.01,">1 nonsynonymous","S41L N109K T148F G155L",4
"lib1","SARS-CoV-2","CCCCCATGATTTCGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P T15G F99Q N118P G155N",5
"lib1","SARS-CoV-2","CCCCCATTATACACCT",1,18.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23E V37G C61A V115N S139P",5
"lib1","SARS-CoV-2","CCCCCCAAAGCCACCT",2,67.66,9.22,-1.54,0.09,2.82,1.15,0,">1 nonsynonymous","Y119S I138G G166Q",3
"lib1","SARS-CoV-2","CCCCCCACCCTGACAT",2,32.62,9.27,-1.49,0.24,1.5,1.13,0.03,">1 nonsynonymous","T15I Q144I",2
"lib1","SARS-CoV-2","CCCCCCAGTACGACCC",1,6.52,10.97,0.21,0.1,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCCCCCAGCAAGTC",3,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L N120L K132W G146E G152Y",5
"lib1","SARS-CoV-2","CCCCCCCCTCGCATAC",3,104.33,9.31,-1.45,0.12,1.89,1.09,0.01,">1 nonsynonymous","L111N R136N",2
"lib1","SARS-CoV-2","CCCCCCCGTGAGGCGA",4,52.88,10.11,-0.65,0.08,2.62,1,0,">1 nonsynonymous","D34S K48M",2
"lib1","SARS-CoV-2","CCCCCCCTTACATATT",6,6.9,6.14,-4.62,1.23,1.5,1.22,0.05,">1 nonsynonymous","S19W D34Y N92Y",3
"lib1","SARS-CoV-2","CCCCCCTATTTAGTAA",10,8.32,9.96,-0.81,0.3,2.59,1.09,0.04,"wildtype","",0
"lib1","SARS-CoV-2","CCCCCCTGATATAATT",4,33.68,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T63G F70E N120K G155R",4
"lib1","SARS-CoV-2","CCCCCCTTCAAAACAT",6,78.41,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N1I C6M L38A N120F D137P G155R",6
"lib1","SARS-CoV-2","CCCCCGACATACCTGA",9,15.49,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","A42H W106R L122K P177Y",4
"lib1","SARS-CoV-2","CCCCCGCCCCAAGCGA",7,50.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16S V65E K87S D97G T100I",5
"lib1","SARS-CoV-2","CCCCCGGACCATGTAA",2,0.32,NA,NA,NA,NA,NA,NA,"stop","R73C C158* S184L",3
"lib1","SARS-CoV-2","CCCCCGGCGAGGCGTG",1,39.08,10.31,-0.45,0.1,2.75,1,0,">1 nonsynonymous","P54R N120C G152S",3
"lib1","SARS-CoV-2","CCCCCGTCACCTAATA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G Y91I A105S L122G G146V",5
"lib1","SARS-CoV-2","CCCCCGTTCTTGTTTA",3,12.42,6.27,-4.49,0.61,1.5,1.04,0.03,">1 nonsynonymous","A42V W106V E141N P149C G152A",5
"lib1","SARS-CoV-2","CCCCCGTTTGCCTTTA",3,21.45,9.03,-1.73,0.2,2.2,1.39,0.02,">1 nonsynonymous","T15Q D34N G146D N151F",4
"lib1","SARS-CoV-2","CCCCCTAAACGTCGCG",1,13.33,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K94Y Q176L V182A",3
"lib1","SARS-CoV-2","CCCCCTAAGACCCGAG",1,38.28,10.85,0.09,0.1,2.96,1.01,0,">1 nonsynonymous","V37E L122R H189G",3
"lib1","SARS-CoV-2","CCCCCTAATGCTTCGC",2,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57H N151I",2
"lib1","SARS-CoV-2","CCCCCTACAGAAACTA",3,68.78,10.75,-0.01,0.03,2.91,1.05,0,">1 nonsynonymous","A22N L122S",2
"lib1","SARS-CoV-2","CCCCCTAGACCAGGTT",14,146.08,10.27,-0.49,0.03,2.81,1.02,0,"1 nonsynonymous","N13W",1
"lib1","SARS-CoV-2","CCCCCTATCACCCCCA",3,33.83,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V103D R127G",2
"lib1","SARS-CoV-2","CCCCCTCAGCTGGACA",1,52.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F99V Y143S",2
"lib1","SARS-CoV-2","CCCCCTCCAGCTCATA",5,7.57,NA,NA,NA,NA,NA,NA,"stop","K87N Y121L A192*",3
"lib1","SARS-CoV-2","CCCCCTCCTATACAAA",16,107.73,6.45,-4.32,0.54,1.5,1.16,0.02,">1 nonsynonymous","Q84G F99H G117W G166N",4
"lib1","SARS-CoV-2","CCCCCTCTGACGCTAT",5,22.59,10.7,-0.06,0.06,2.9,1.06,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","CCCCCTGCCACATTAA",10,55.94,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","Y35K A42R Y93R",3
"lib1","SARS-CoV-2","CCCCCTGTCTATATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5C S41I G86* P133R",4
"lib1","SARS-CoV-2","CCCCCTTACCCCCAAG",9,68.69,9.95,-0.82,0.07,2.6,1,0,">1 nonsynonymous","A42W N107S T201L",3
"lib1","SARS-CoV-2","CCCCCTTACCTCAACT",2,9.24,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","F62G F99S",2
"lib1","SARS-CoV-2","CCCCCTTCTATCCACT",6,34.89,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C49L V65P G152A",3
"lib1","SARS-CoV-2","CCCCCTTCTTTGCAAA",4,106.95,9.75,-1.02,0.09,2.26,1.09,0,"1 nonsynonymous","L162Y",1
"lib1","SARS-CoV-2","CCCCCTTTCGAATAAC",2,115.02,10.46,-0.31,0.03,2.91,1.01,0,"1 nonsynonymous","G166N",1
"lib1","SARS-CoV-2","CCCCGAAAGTTACATC",4,33.02,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","I72K L122M L162R",3
"lib1","SARS-CoV-2","CCCCGAAATACATGGG",10,16.63,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N1K L162T P169Y V182T",4
"lib1","SARS-CoV-2","CCCCGAAATACTGGAG",2,74.04,10.06,-0.71,0.05,2.67,1,0,">1 nonsynonymous","G51M V115S",2
"lib1","SARS-CoV-2","CCCCGAATAAGATAAT",7,62.21,7.41,-3.36,0.18,1.5,1.18,0.01,">1 nonsynonymous","N107H G116M Y143F",3
"lib1","SARS-CoV-2","CCCCGAATCACATTTC",6,127.73,10.75,-0.01,0.05,2.91,1.04,0,">1 nonsynonymous","L95V N110L",2
"lib1","SARS-CoV-2","CCCCGAATGCGAGACT",2,22.6,10.54,-0.22,0.09,2.88,1.05,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","CCCCGAATTAGGTCAC",1,28.57,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V11D V77G D98E",3
"lib1","SARS-CoV-2","CCCCGACCGTGGATAG",2,24.58,9.8,-0.96,0.35,1.5,1,0.07,">1 nonsynonymous","R27D A105L",2
"lib1","SARS-CoV-2","CCCCGAGAAAATGTAA",8,28.28,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6S L95Q F134L",3
"lib1","SARS-CoV-2","CCCCGAGAAATAAACA",4,55.76,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","Y21W V37N G51R G86M",4
"lib1","SARS-CoV-2","CCCCGAGCGGCATAGC",1,54.75,8.45,-2.31,0.12,1.77,1.1,0.01,">1 nonsynonymous","R78P G86C",2
"lib1","SARS-CoV-2","CCCCGAGGCGATATCG",6,32.59,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y35S S43R Y93V L183C",4
"lib1","SARS-CoV-2","CCCCGAGTACTAAGCC",9,85.5,6,-4.76,1.7,1.5,1.17,0.02,">1 nonsynonymous","F62H Q84L L162A",3
"lib1","SARS-CoV-2","CCCCGATAAACTTCTA",2,50.38,9.32,-1.45,0.16,2.36,1.06,0.01,">1 nonsynonymous","L5P I104Y Y165I K198Q",4
"lib1","SARS-CoV-2","CCCCGATAAGACAAAA",6,100.09,10.46,-0.3,0.04,2.87,1.01,0,">1 nonsynonymous","N4V T85R N120W",3
"lib1","SARS-CoV-2","CCCCGATACCAGCTAA",4,129,10.65,-0.11,0.06,2.86,1.07,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","CCCCGATCTGCATAAT",3,49.34,10.9,0.13,0.07,2.9,1.03,0,">1 nonsynonymous","T55K Q84A",2
"lib1","SARS-CoV-2","CCCCGATTAGACCCCA",6,123.14,10.84,0.07,0.06,2.92,1.04,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","CCCCGCAATATAACTA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","N40L F44*",2
"lib1","SARS-CoV-2","CCCCGCACCTAGTCGG",6,76.95,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9T K87L Q144T Y159E Y178P T201V",6
"lib1","SARS-CoV-2","CCCCGCAGATGATCAA",5,0,NA,NA,NA,NA,NA,NA,"stop","A42* Q84S L122K S129L",4
"lib1","SARS-CoV-2","CCCCGCGACATCACAG",3,63.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R16E F44R Y121L V173T T201A",5
"lib1","SARS-CoV-2","CCCCGCGAGCAATATT",14,44.43,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","L60R D97I S164R Y178P",4
"lib1","SARS-CoV-2","CCCCGCGCTGATGGTA",2,16.17,10.44,-0.33,0.12,2.74,1.17,0.01,"1 nonsynonymous","K87W",1
"lib1","SARS-CoV-2","CCCCGCGGTACCGAAA",9,292.62,8.31,-2.46,0.14,2.45,1.1,0.01,">1 nonsynonymous","G117E P133G F156V",3
"lib1","SARS-CoV-2","CCCCGCGTCCTTAACC",2,37,10.67,-0.1,0.04,2.95,1.02,0,">1 nonsynonymous","S41Y D98H",2
"lib1","SARS-CoV-2","CCCCGCTTGAAGGCAG",2,25.1,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C49D F99H P161R",3
"lib1","SARS-CoV-2","CCCCGGACACACAGAA",1,22.59,10.33,-0.44,0.06,2.89,1.09,0,">1 nonsynonymous","K128C F160A",2
"lib1","SARS-CoV-2","CCCCGGAGTTGCAGAC",5,48.42,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I88E Y123E T148P",3
"lib1","SARS-CoV-2","CCCCGGATAATCCATA",4,78.38,10.42,-0.34,0.06,2.91,1.02,0,"1 nonsynonymous","D97C",1
"lib1","SARS-CoV-2","CCCCGGATGAACACGG",1,3.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","CCCCGGCTAGCCGAGC",6,22.68,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F12Y Y50V S129G",3
"lib1","SARS-CoV-2","CCCCGTATAAGATAAA",5,71.62,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y39D I88A S139T E154L",4
"lib1","SARS-CoV-2","CCCCGTCCCGGTACCT",2,16.65,6,-4.76,0.92,3,1.13,0.01,"1 nonsynonymous","I88D",1
"lib1","SARS-CoV-2","CCCCGTGGCACCCCTA",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M S41V N64T P96T Y121T",5
"lib1","SARS-CoV-2","CCCCGTTCAGGGGAAG",1,1.69,NA,NA,NA,NA,NA,NA,"stop","S19K K26S A42* P82T A105V P177T",6
"lib1","SARS-CoV-2","CCCCGTTCTAAAACTA",3,27.92,6,-4.76,2,1.78,1.31,0.01,">1 nonsynonymous","V37W P82G S113M K132W",4
"lib1","SARS-CoV-2","CCCCTAAAACCGTTTT",6,34.43,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S19G S41I D59R K94V K114L",5
"lib1","SARS-CoV-2","CCCCTAAAGCCTCTGG",2,40.56,10.85,0.09,0.08,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTAAATTAGGTCC",1,57.07,10.72,-0.04,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTAACACAAGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","A18* F47V",2
"lib1","SARS-CoV-2","CCCCTAACCCCAAACG",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N L60G",2
"lib1","SARS-CoV-2","CCCCTAACTCAACCTG",1,0.78,NA,NA,NA,NA,NA,NA,"stop","D90* D112R F126*",3
"lib1","SARS-CoV-2","CCCCTAAGTCGCGTGA",2,67.66,10.45,-0.31,0.05,2.86,1,0,"1 nonsynonymous","R136C",1
"lib1","SARS-CoV-2","CCCCTAATTCACGCGG",8,67.26,10.8,0.04,0.06,2.9,1.02,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","CCCCTAATTGCGGCAG",1,24.86,6.15,-4.62,0.64,1.5,1.24,0.02,">1 nonsynonymous","A14W C49N R78L P149V C158L V173N",6
"lib1","SARS-CoV-2","CCCCTAATTTGTTATG",2,9.37,10.7,-0.07,0.09,2.92,1.06,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","CCCCTACACACCACTT",11,245.47,10.41,-0.35,0.04,2.88,1.01,0,">1 nonsynonymous","K114W S184F",2
"lib1","SARS-CoV-2","CCCCTACACCCCTTAT",3,69.46,10.66,-0.11,0.1,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTACACTAGACAG",2,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N Q168R",2
"lib1","SARS-CoV-2","CCCCTACACTGAAGTT",3,143.06,10.73,-0.04,0.07,2.92,1.04,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","CCCCTACAGGGTATCC",8,73.51,10.11,-0.65,0.06,2.84,1,0,">1 nonsynonymous","P7S E141V G155A",3
"lib1","SARS-CoV-2","CCCCTACGTGGAATAT",2,52.56,6,-4.76,1.18,1.5,1.15,0.01,">1 nonsynonymous","V11L S19G N118L F167D",4
"lib1","SARS-CoV-2","CCCCTACTGTGTGGTC",1,17.29,10.02,-0.75,0.06,2.96,1.01,0,">1 nonsynonymous","V37L Y143W",2
"lib1","SARS-CoV-2","CCCCTACTTGAATACA",2,32.62,6,-4.76,1.65,1.5,1.18,0.03,">1 nonsynonymous","N13C G172M P177A",3
"lib1","SARS-CoV-2","CCCCTAGGACTATTTT",8,79.94,6,-4.76,0.98,1.5,1.16,0.01,">1 nonsynonymous","A81R Y93E N109S",3
"lib1","SARS-CoV-2","CCCCTATAAGCCAGTG",5,282.69,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","CCCCTATACCCGTTTG",24,34.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F47R D97G G174V",3
"lib1","SARS-CoV-2","CCCCTATCCACATATA",3,1.8,NA,NA,NA,NA,NA,NA,"stop","C31Y N40T E76Y T100Y S113L T140*",6
"lib1","SARS-CoV-2","CCCCTATCCACTTATC",1,11.73,9.99,-0.77,0.2,2.26,1.1,0.02,">1 nonsynonymous","L5E A42M D75M A89V",4
"lib1","SARS-CoV-2","CCCCTATCTCTACTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","D90P S139N G146*",3
"lib1","SARS-CoV-2","CCCCTATTAACTCTTC",10,36.46,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I72D G117D",2
"lib1","SARS-CoV-2","CCCCTATTTATCCAGG",3,4.59,NA,NA,NA,NA,NA,NA,"stop","Q84F P96* L111R",3
"lib1","SARS-CoV-2","CCCCTCACCTCTCACC",6,90.76,8.97,-1.79,0.2,1.5,1.03,0.02,">1 nonsynonymous","T3S I28C T85V A89S D97Y",5
"lib1","SARS-CoV-2","CCCCTCACTTAAGATC",2,11.43,10.13,-0.63,0.18,2.61,1.06,0.01,">1 nonsynonymous","L5N D90E I138G",3
"lib1","SARS-CoV-2","CCCCTCAGGAGAGCAC",2,118.47,8.05,-2.71,0.11,1.96,1.15,0,"1 nonsynonymous","Y175E",1
"lib1","SARS-CoV-2","CCCCTCAGTAAGTAGT",5,2.76,NA,NA,NA,NA,NA,NA,"stop","I72* A81N P161S",3
"lib1","SARS-CoV-2","CCCCTCATATCCCATT",8,56.74,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","K87E Y121D N130R R179M A190E",5
"lib1","SARS-CoV-2","CCCCTCATGTCCTCTC",6,31.89,6.75,-4.01,0.4,1.5,1.17,0.03,">1 nonsynonymous","L57W C102T",2
"lib1","SARS-CoV-2","CCCCTCATGTGACACT",2,135.26,10.71,-0.05,0.05,2.92,1.01,0,">1 nonsynonymous","N4S T63R",2
"lib1","SARS-CoV-2","CCCCTCCAATCGTGAC",2,29.7,6.08,-4.69,0.9,1.5,1.08,0.02,">1 nonsynonymous","W23C F44Y L60R P96R R127E Q176E",6
"lib1","SARS-CoV-2","CCCCTCCAATTCAAGA",4,38.24,10.91,0.14,0.07,3,1,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","CCCCTCCACCCACTAG",1,5.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F156K L183T",2
"lib1","SARS-CoV-2","CCCCTCGTAAACTAAA",9,105.45,10.66,-0.11,0.05,2.9,1.07,0,">1 nonsynonymous","I2H A192E",2
"lib1","SARS-CoV-2","CCCCTCTCAGCGGAAG",1,44.69,10.49,-0.28,0.05,2.94,1,0,">1 nonsynonymous","A14S K87V",2
"lib1","SARS-CoV-2","CCCCTCTTATGATTAA",5,56.46,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V37D G101T K128R",3
"lib1","SARS-CoV-2","CCCCTCTTGAATTTAC",7,88.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L57R L122K I142S G146L",4
"lib1","SARS-CoV-2","CCCCTGACAACCCGAG",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCCCTGACGATTCAAT",8,99.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N92E R136S",2
"lib1","SARS-CoV-2","CCCCTGACTATAAAAT",3,8.83,10.86,0.09,0.15,2.93,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTGAGGCAAACAG",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Q S129E R179S",3
"lib1","SARS-CoV-2","CCCCTGATAACTGGAA",4,27.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y35H G86H L95F T100M",4
"lib1","SARS-CoV-2","CCCCTGATGTACATGC",1,5.79,9.64,-1.12,0.22,2.73,1.01,0.02,"1 nonsynonymous","T170N",1
"lib1","SARS-CoV-2","CCCCTGCACCACGGGA",2,69.36,10.5,-0.26,0.04,2.96,1.02,0,">1 nonsynonymous","T15V P149A",2
"lib1","SARS-CoV-2","CCCCTGCTCTAGCAGT",5,23.18,6,-4.76,2,3,1.15,0,">1 nonsynonymous","E76Y K94S G116L",3
"lib1","SARS-CoV-2","CCCCTGGCCCTCGAAT",3,22.76,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","Y66N G101R N107S",3
"lib1","SARS-CoV-2","CCCCTGGGACTAAGAG",1,7.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52H P82V T201A",3
"lib1","SARS-CoV-2","CCCCTGGGCTAAAACC",3,1.86,NA,NA,NA,NA,NA,NA,"stop","T46S S53*",2
"lib1","SARS-CoV-2","CCCCTGTAAAGAATGG",2,18.3,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A14M D112V L122V R127S",4
"lib1","SARS-CoV-2","CCCCTGTATAGCCCTA",3,43.85,8.2,-2.56,0.34,1.5,1.12,0.05,">1 nonsynonymous","G83K V103A N130T",3
"lib1","SARS-CoV-2","CCCCTGTTCATAAGTA",2,24.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10F R16C C61W K87I D97C D112C T201A",7
"lib1","SARS-CoV-2","CCCCTTAAAAGTAAAG",1,32.01,10.87,0.1,0.08,2.93,1.03,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","CCCCTTAACTCTACAA",1,19.72,10.77,0.01,0.07,2.85,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTTACTTAGCTGA",2,17.98,8.6,-2.17,0.22,1.5,1.05,0.03,">1 nonsynonymous","N1S Y93I T100F",3
"lib1","SARS-CoV-2","CCCCTTAGAAGGCTAC",7,150.89,10.76,0,0.05,2.91,1.05,0,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","CCCCTTAGCGAGCGAA",4,143.24,9.21,-1.55,0.07,2.76,1.11,0,"1 nonsynonymous","G117K",1
"lib1","SARS-CoV-2","CCCCTTAGTAAACCAA",3,68.05,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","L5S Y50C F126I F134S Q176P",5
"lib1","SARS-CoV-2","CCCCTTATTAACCACT",1,10.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136W C158K",2
"lib1","SARS-CoV-2","CCCCTTCAAACCAATT",3,28.1,9.71,-1.06,0.13,2.2,1.13,0.01,">1 nonsynonymous","C6V S36P L122Q I142T",4
"lib1","SARS-CoV-2","CCCCTTCCACCTCATC",1,5.1,NA,NA,NA,NA,NA,NA,"stop","L5R L122*",2
"lib1","SARS-CoV-2","CCCCTTCCCGCTGGGT",4,5.2,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib1","SARS-CoV-2","CCCCTTCCTTGCACAA",7,1.19,NA,NA,NA,NA,NA,NA,"stop","S41E C61S D68E G101N L122V Q163*",6
"lib1","SARS-CoV-2","CCCCTTCGATCAGCGA",3,13.86,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6S G101Q L122P",3
"lib1","SARS-CoV-2","CCCCTTCGGGGATACA",3,14.78,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12P D90Q C102V C150D G155M",5
"lib1","SARS-CoV-2","CCCCTTGATTTACCTA",3,41.19,10.7,-0.06,0.06,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTTGCGGGCGACA",10,146.72,10.81,0.05,0.06,2.92,1.04,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","CCCCTTGTCTGATGAA",1,267.93,10.74,-0.03,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCCTTTACCAATCCA",3,0,NA,NA,NA,NA,NA,NA,"stop","K26V P96* G172Y Y178F",4
"lib1","SARS-CoV-2","CCCCTTTAGATAGTTC",2,7.91,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","I104S S139V P169I",3
"lib1","SARS-CoV-2","CCCCTTTATAATGGCA",3,15.86,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9T V37M R73V I88Y V103C P149L",6
"lib1","SARS-CoV-2","CCCCTTTCGGTATTGT",7,40.48,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","S19R S41L Y119L N157M",4
"lib1","SARS-CoV-2","CCCCTTTGGATTGAAC",2,97.83,10.12,-0.64,0.06,2.86,1,0,">1 nonsynonymous","G116A S129L",2
"lib1","SARS-CoV-2","CCCCTTTTAAGCTTAG",10,83.24,10.74,-0.02,0.05,2.95,1.03,0,">1 nonsynonymous","V37M K48N N151Q",3
"lib1","SARS-CoV-2","CCCGAAAAACCACATG",1,17.78,10.69,-0.07,0.06,2.84,1.11,0,">1 nonsynonymous","C61L L122R",2
"lib1","SARS-CoV-2","CCCGAAAAACTTCTAT",12,5.07,NA,NA,NA,NA,NA,NA,"stop","N1* N110* I138F N151G",4
"lib1","SARS-CoV-2","CCCGAAAACGAATCTA",1,5.37,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L5C G116P S147L G155I V181R",5
"lib1","SARS-CoV-2","CCCGAAAAGTTACTAA",2,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y Y21S G83L Y121F F156Q",5
"lib1","SARS-CoV-2","CCCGAAAATTCCATTA",4,39.64,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N92M I104W",2
"lib1","SARS-CoV-2","CCCGAAACCAACAATG",7,64.3,10.24,-0.53,0.05,2.88,1,0,">1 nonsynonymous","D34N K87L N110M",3
"lib1","SARS-CoV-2","CCCGAAACTAATACGG",3,43.43,10.76,0,0.1,2.92,1.07,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","CCCGAAAGACACAATA",4,82.29,6,-4.76,1.32,1.5,1.18,0.01,">1 nonsynonymous","F62R Y159F Y175E T201V",4
"lib1","SARS-CoV-2","CCCGAAATAACCGAAG",3,92.94,6,-4.76,1.44,1.5,1.14,0.02,">1 nonsynonymous","A22R S36T K56E R124P",4
"lib1","SARS-CoV-2","CCCGAAATTCGTGGGC",6,16.34,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T3L F12D Y50R G83D D90P",5
"lib1","SARS-CoV-2","CCCGAACACACTTTTT",4,95.33,10.73,-0.03,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGAACACTTCCAAA",8,87.43,10.59,-0.18,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CCCGAACCCTATATGA",3,14.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G D112K S139G Y143M K198G",5
"lib1","SARS-CoV-2","CCCGAAGACCCTCTGG",1,6.58,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D59N V103D G117V L125P Y143C F167I",6
"lib1","SARS-CoV-2","CCCGAATAACCAGGCA",1,19.64,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L38E G51N C61S Y91Q",4
"lib1","SARS-CoV-2","CCCGAATATTTTTCAT",8,53.97,8.75,-2.02,0.32,1.5,1,0.03,">1 nonsynonymous","N30R L38D D90K T148V",4
"lib1","SARS-CoV-2","CCCGAATCCCACTAAA",6,22.28,6,-4.76,2,1.5,1.24,0.07,"1 nonsynonymous","D68G",1
"lib1","SARS-CoV-2","CCCGACAACACGTTAG",1,30.34,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","N92F",1
"lib1","SARS-CoV-2","CCCGACAATTTAAAAC",13,166.53,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19R L57M R124F",3
"lib1","SARS-CoV-2","CCCGACAGATGCCATA",1,56.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S19F Y39F L95S Y119V I142Q P177V",6
"lib1","SARS-CoV-2","CCCGACAGGCCTAGGA",3,51.71,10.75,-0.02,0.11,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGACATACTCACTC",8,71.35,10.67,-0.1,0.07,2.9,1.06,0,">1 nonsynonymous","N1P S129R N151C",3
"lib1","SARS-CoV-2","CCCGACCAGAGCATAG",2,7.17,10.03,-0.73,0.31,2.79,1.08,0.04,">1 nonsynonymous","Y21F T85W N151Y G152C V173Y",5
"lib1","SARS-CoV-2","CCCGACCAGTCTAGAT",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71D A89D T170N K198M",4
"lib1","SARS-CoV-2","CCCGACCCGTTGGGTA",6,1.73,NA,NA,NA,NA,NA,NA,"stop","T15R S36A K48* S147C V173S",5
"lib1","SARS-CoV-2","CCCGACCTCGCATAAT",3,96.52,9.49,-1.28,0.1,2.47,1.09,0,">1 nonsynonymous","S139I T170S",2
"lib1","SARS-CoV-2","CCCGACGAAAGTCAAC",2,116.4,10.77,0.01,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGACGATTATGGGG",1,45.15,8.58,-2.19,0.07,2.82,1.05,0,">1 nonsynonymous","I2T G166F",2
"lib1","SARS-CoV-2","CCCGACGCGCCTTTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L A81T",2
"lib1","SARS-CoV-2","CCCGACGGCGGATTAA",2,0.98,NA,NA,NA,NA,NA,NA,"stop","N120* L183P",2
"lib1","SARS-CoV-2","CCCGACGTACACGAAA",4,84.33,8.12,-2.64,0.21,1.5,1.13,0.01,">1 nonsynonymous","L38P N107R T201H",3
"lib1","SARS-CoV-2","CCCGACTAAGGGCAGG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W L60D G116L E141R P191F",5
"lib1","SARS-CoV-2","CCCGACTAGAGATATG",8,130.07,10.54,-0.22,0.05,2.92,1.05,0,">1 nonsynonymous","S29K K87V L122I",3
"lib1","SARS-CoV-2","CCCGACTGCACCACTC",2,26.44,10.28,-0.48,0.07,2.96,1,0,">1 nonsynonymous","T63E F156L S200P",3
"lib1","SARS-CoV-2","CCCGACTGGTATATCC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","S113* T148R T201N",3
"lib1","SARS-CoV-2","CCCGAGAAGACCGAGA",5,1.86,NA,NA,NA,NA,NA,NA,"stop","Y21L N92L V115S K132R N157S P177*",6
"lib1","SARS-CoV-2","CCCGAGAATCTTCATA",2,22.12,10.78,0.01,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGAGCAATTATATA",13,157.38,10.56,-0.2,0.05,2.87,1.03,0,">1 nonsynonymous","G51K T85F L122M",3
"lib1","SARS-CoV-2","CCCGAGCATTTATGTC",5,47.93,8.48,-2.29,0.21,1.5,1.18,0.01,">1 nonsynonymous","T15D D68M Q84A Y123R",4
"lib1","SARS-CoV-2","CCCGAGCTAGTACAGA",4,56.44,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R73G P96C S139G",3
"lib1","SARS-CoV-2","CCCGAGGCACAGCTAA",2,52.89,10.79,0.03,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGAGGTAAATACAC",8,115.51,10.71,-0.05,0.04,2.89,1.05,0,"1 nonsynonymous","G152N",1
"lib1","SARS-CoV-2","CCCGAGTTCATTTGGA",1,70.97,10.74,-0.02,0.08,2.88,1.05,0,"1 nonsynonymous","S200K",1
"lib1","SARS-CoV-2","CCCGAGTTGAACGAGA",9,94.31,9.76,-1,0.11,2.04,1.12,0,">1 nonsynonymous","N13V T46S N120S L188T",4
"lib1","SARS-CoV-2","CCCGATAAAATGGTAG",5,86.82,10.64,-0.13,0.08,2.9,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CCCGATAACATAACAC",3,18.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W106R R124N P133S P161Y",4
"lib1","SARS-CoV-2","CCCGATACAAGCCTAA",1,32.38,7.67,-3.1,0.2,2.25,1.13,0.01,">1 nonsynonymous","I2K A33L K48D L122K N157Y S164Y",6
"lib1","SARS-CoV-2","CCCGATACCAATTATA",20,302.86,9.36,-1.41,0.1,1.89,1.07,0,">1 nonsynonymous","Y121A K128L T140R",3
"lib1","SARS-CoV-2","CCCGATAGCAAAGTCG",2,20.78,10.77,0,0.08,2.81,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGATATAGACAAAA",3,13.18,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","A105D",1
"lib1","SARS-CoV-2","CCCGATCAACCTACTC",6,82.52,6,-4.76,2,3,1.21,0,">1 nonsynonymous","F44L C150F",2
"lib1","SARS-CoV-2","CCCGATCATTACAAGA",2,4.05,NA,NA,NA,NA,NA,NA,"stop","C61* G101L L125W",3
"lib1","SARS-CoV-2","CCCGATCCCATTATTG",6,18.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21K V103G K128G Y143S",4
"lib1","SARS-CoV-2","CCCGATGAACAGCTCA",3,47.04,10.12,-0.65,0.08,2.62,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","CCCGATGCAATATGAC",1,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155M",1
"lib1","SARS-CoV-2","CCCGATGCACACTAAT",1,445.38,10.74,-0.02,0.05,2.92,1.02,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","CCCGATGGGCGAGTGA",7,77.63,10.76,-0.01,0.09,2.88,1.03,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","CCCGATGGGGGAGTTA",5,1.56,NA,NA,NA,NA,NA,NA,"stop","K199S S200*",2
"lib1","SARS-CoV-2","CCCGATTATGTTATAC",1,13.04,10.06,-0.71,0.25,1.79,1.08,0.02,">1 nonsynonymous","A89H Y143H",2
"lib1","SARS-CoV-2","CCCGATTGTTGATAAT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","T46H K56F W106* Y123W K199N",5
"lib1","SARS-CoV-2","CCCGCAAAAAGTCCCC",5,62.21,10.67,-0.09,0.05,2.92,1.03,0,">1 nonsynonymous","I2S Y39G",2
"lib1","SARS-CoV-2","CCCGCAAACCTGTGAC",3,33.01,10.75,-0.02,0.07,2.85,1.11,0,">1 nonsynonymous","I28M T201N",2
"lib1","SARS-CoV-2","CCCGCAAATTCTTCAT",10,109.58,6,-4.76,2,1.5,1.33,0.02,">1 nonsynonymous","N13R V37T T55F A89C K128C",5
"lib1","SARS-CoV-2","CCCGCAACAAATAGAT",2,75.34,10.06,-0.71,0.05,2.76,1.04,0,">1 nonsynonymous","Q79H S113A K199S",3
"lib1","SARS-CoV-2","CCCGCAAGATGAAACG",4,0,NA,NA,NA,NA,NA,NA,"stop","N24T G51T A89S D98H I104* Y121A",6
"lib1","SARS-CoV-2","CCCGCAAGCAAGAAGG",5,63.95,6,-4.76,0.91,1.5,1.16,0,">1 nonsynonymous","F12W A18Y F47L Y93D G146V F167C",6
"lib1","SARS-CoV-2","CCCGCAATATACACTT",11,171.91,10.7,-0.06,0.08,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCGCACACGGCGAAG",1,12.43,11.02,0.26,0.19,2.89,1.02,0.01,"1 nonsynonymous","S36G",1
"lib1","SARS-CoV-2","CCCGCACCACCAGAAC",3,25.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N64L R124T Y143L Q176S",4
"lib1","SARS-CoV-2","CCCGCACGATGGAACT",2,20.01,8.79,-1.98,0.36,1.5,1,0.08,">1 nonsynonymous","N1Y G9R L60S L95Y V103H L131M",6
"lib1","SARS-CoV-2","CCCGCACGTGGTTTAA",3,44.49,10.9,0.14,0.06,2.94,1.02,0,">1 nonsynonymous","I2W L122S K198R",3
"lib1","SARS-CoV-2","CCCGCACTGTGACAAC",10,155.99,6.46,-4.3,0.56,1.5,1.21,0.03,">1 nonsynonymous","A14S S69L G116F P149Y",4
"lib1","SARS-CoV-2","CCCGCACTTAATCGGG",3,0,NA,NA,NA,NA,NA,NA,"stop","I2G C61S T100Q W106* N120F S139G",6
"lib1","SARS-CoV-2","CCCGCACTTTAACATG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","CCCGCAGAATAAACTA",7,56.96,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21L N30L A89H V103L N151L",5
"lib1","SARS-CoV-2","CCCGCATAATTACACA",1,71.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8K T15S S29L G86E I104F G166S",6
"lib1","SARS-CoV-2","CCCGCATATCCTGAAA",5,127.43,10.65,-0.12,0.05,2.94,1.02,0,">1 nonsynonymous","A105S N130S",2
"lib1","SARS-CoV-2","CCCGCCAACACTGACG",3,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P Y121F D137P",3
"lib1","SARS-CoV-2","CCCGCCAAGCGGCTTC",5,8.9,NA,NA,NA,NA,NA,NA,"stop","R73* N130I",2
"lib1","SARS-CoV-2","CCCGCCACGCGTCTCA",5,60.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4H L60R E135M N157T Y165H",5
"lib1","SARS-CoV-2","CCCGCCCCGGAGTGTG",3,41.2,8.43,-2.33,0.15,2.66,1.09,0.01,">1 nonsynonymous","D90A N157T",2
"lib1","SARS-CoV-2","CCCGCCCTGAGATACC",1,7.16,7.77,-3,0.47,1.5,1.08,0.08,">1 nonsynonymous","L95F F134T K199N",3
"lib1","SARS-CoV-2","CCCGCGAAGTCCTCGC",3,10,11.17,0.4,0.23,2.91,1,0.01,"1 nonsynonymous","E141F",1
"lib1","SARS-CoV-2","CCCGCGAGTGATAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F8D K26* L95C C150L Y159K",5
"lib1","SARS-CoV-2","CCCGCGCATACGCATA",1,26.09,8.33,-2.43,0.19,2.24,1.1,0.01,">1 nonsynonymous","D59V N157R N171V",3
"lib1","SARS-CoV-2","CCCGCGTATTCATATC",4,88.97,9.59,-1.18,0.05,2.85,1.04,0,">1 nonsynonymous","P54L Y119S T201D",3
"lib1","SARS-CoV-2","CCCGCGTATTCGAACT",4,80.81,10.47,-0.29,0.06,2.88,1.06,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","CCCGCTAACCACCGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* V115L",2
"lib1","SARS-CoV-2","CCCGCTAAGGGCCCCT",3,0,NA,NA,NA,NA,NA,NA,"stop","T55S C195*",2
"lib1","SARS-CoV-2","CCCGCTAATAAGATAC",5,29.6,10.15,-0.62,0.14,2.47,1,0.01,">1 nonsynonymous","K26W A42P N64T K128F",4
"lib1","SARS-CoV-2","CCCGCTCCTCATAATG",4,20.17,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","C6S N109M G155F",3
"lib1","SARS-CoV-2","CCCGCTGCATGTCTGG",4,136.09,10.81,0.04,0.05,2.95,1.03,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","CCCGCTGGGTACATTG",7,99.41,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G86I P133F",2
"lib1","SARS-CoV-2","CCCGCTGTCACCTCCT",7,29.3,8.22,-2.55,0.2,2.02,1.13,0.02,">1 nonsynonymous","D34L A42E Y119N",3
"lib1","SARS-CoV-2","CCCGCTTAGTTCAGAT",2,65.69,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I80S N120T K128I V173E",4
"lib1","SARS-CoV-2","CCCGGAAACTAAATGC",2,53.49,10.3,-0.46,0.19,2.2,1,0.01,">1 nonsynonymous","A14E Y123L T148S",3
"lib1","SARS-CoV-2","CCCGGAATAATTAATT",3,48.62,6,-4.76,2,2.05,1.15,0.01,">1 nonsynonymous","T46D I72Y",2
"lib1","SARS-CoV-2","CCCGGAATTAAGGGCA",3,145.09,10.68,-0.09,0.05,2.88,1.1,0,"1 nonsynonymous","L188V",1
"lib1","SARS-CoV-2","CCCGGAGCGTACATAG",5,80.91,8.51,-2.26,0.24,1.5,1.13,0.02,">1 nonsynonymous","C6W P161S",2
"lib1","SARS-CoV-2","CCCGGAGCTCCAAACT",2,53.96,10.2,-0.56,0.06,2.81,1.06,0,">1 nonsynonymous","Y35K K56E K114R",3
"lib1","SARS-CoV-2","CCCGGATATTCAGTGG",12,199.66,10.77,0.01,0.06,2.86,1.08,0,">1 nonsynonymous","N1S G9H",2
"lib1","SARS-CoV-2","CCCGGATCAATGCGTA",4,72.91,8.91,-1.85,0.39,1.5,1,0.07,">1 nonsynonymous","A14S Y35N Y39N F167P",4
"lib1","SARS-CoV-2","CCCGGATCCAGATCCG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L D112F",2
"lib1","SARS-CoV-2","CCCGGATCCAGCATTG",1,23.35,10.54,-0.22,0.05,2.96,1.03,0,">1 nonsynonymous","G116S A190E",2
"lib1","SARS-CoV-2","CCCGGATCGTATATTG",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31S",1
"lib1","SARS-CoV-2","CCCGGATTATTGGGAT",4,64.99,10.23,-0.54,0.05,2.73,1.02,0,">1 nonsynonymous","N64H D90V",2
"lib1","SARS-CoV-2","CCCGGATTTTAGATTT",2,25.79,9.92,-0.85,0.13,2.69,1.07,0.01,">1 nonsynonymous","T15M G174T",2
"lib1","SARS-CoV-2","CCCGGCAGCCACTGGC",2,30.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5S F44S K94L S113W R136A P177E",6
"lib1","SARS-CoV-2","CCCGGCCGTAACAGAA",3,59.48,10.76,-0.01,0.05,2.9,1.06,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","CCCGGCGATTCTACTG",1,12.37,7.16,-3.6,0.81,1.5,1.05,0.08,">1 nonsynonymous","N1M A22G D34Y V103M",4
"lib1","SARS-CoV-2","CCCGGGAAAGATCTTG",1,10.35,10.25,-0.51,0.44,2.25,1,0.01,">1 nonsynonymous","P7L I104T",2
"lib1","SARS-CoV-2","CCCGGGGCGTGACATT",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V C6G N130S",3
"lib1","SARS-CoV-2","CCCGGTAAACAAGCAG",8,140.21,10.23,-0.54,0.05,2.91,1,0,">1 nonsynonymous","V32Y R73M",2
"lib1","SARS-CoV-2","CCCGGTAAACGGGGGA",8,1.78,NA,NA,NA,NA,NA,NA,"stop","N40* E141*",2
"lib1","SARS-CoV-2","CCCGGTATGAACTTTA",3,64.62,10.75,-0.01,0.05,2.96,1.02,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","CCCGGTCGCAAATTAA",1,15.02,10.36,-0.4,0.14,2.8,1.14,0.01,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","CCCGGTCGTAGCACTA",3,7.96,10.65,-0.11,0.13,2.99,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCCGGTGAACGCAGAG",11,167.69,6.21,-4.56,0.52,1.5,1.2,0.01,">1 nonsynonymous","Y35D Q176R",2
"lib1","SARS-CoV-2","CCCGGTGAACGCCAGT",1,1.21,NA,NA,NA,NA,NA,NA,"stop","D68* K94T E141D",3
"lib1","SARS-CoV-2","CCCGGTGACTATAAAC",1,6.51,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","R78C I88Y",2
"lib1","SARS-CoV-2","CCCGGTGTTAAATACA",6,18.93,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","CCCGGTTGTACTTTAC",9,76.88,8.84,-1.93,0.18,1.5,1.02,0.01,">1 nonsynonymous","L5T S45L F160A F167Y",4
"lib1","SARS-CoV-2","CCCGTAAAGGCTCATT",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F T55D C61G",3
"lib1","SARS-CoV-2","CCCGTAACAGGCACTG",7,2.32,NA,NA,NA,NA,NA,NA,"stop","K26G S45* L183I",3
"lib1","SARS-CoV-2","CCCGTAACATAAAGAC",14,141.33,10.63,-0.13,0.04,2.92,1.01,0,"1 nonsynonymous","L187P",1
"lib1","SARS-CoV-2","CCCGTAACCCATAGCA",2,21.54,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","V11K Y35V F70K G86P N92R R136A Q168G",7
"lib1","SARS-CoV-2","CCCGTAAGAATATCTG",6,27.56,8.99,-1.77,0.13,2.37,1.13,0.01,">1 nonsynonymous","D34L K128A E141K F156V",4
"lib1","SARS-CoV-2","CCCGTAAGTGCTTTTA",1,18.8,6.33,-4.44,0.51,1.5,1.12,0.02,">1 nonsynonymous","N107H C150E T201P",3
"lib1","SARS-CoV-2","CCCGTAATATCAGATG",1,5.72,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","F126S G155Y",2
"lib1","SARS-CoV-2","CCCGTAATTCTATATC",7,52.1,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19Q C61T A67S G86K E135G",5
"lib1","SARS-CoV-2","CCCGTAATTTACATCA",3,13.84,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","A81T N118V R124P",3
"lib1","SARS-CoV-2","CCCGTACACCGATAGC",4,13.05,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","CCCGTACAGGAAATGA",4,2.39,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","CCCGTATATCAAAACT",3,58.94,9.98,-0.78,0.1,2.72,1.03,0.01,">1 nonsynonymous","F44E N120L",2
"lib1","SARS-CoV-2","CCCGTATGCCTGAAAG",6,66,10.27,-0.49,0.06,2.81,1.03,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","CCCGTATGGTACAATC",5,0.53,NA,NA,NA,NA,NA,NA,"stop","T3* V77W N118C",3
"lib1","SARS-CoV-2","CCCGTCACACATCACA",9,189.58,10.25,-0.51,0.05,2.88,1.02,0,">1 nonsynonymous","N4D P7S S36V V115F T148Q T201M",6
"lib1","SARS-CoV-2","CCCGTCATAACTGACA",3,20.42,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T46V T100K N107G D112K V173S",5
"lib1","SARS-CoV-2","CCCGTCCACAATTCAG",1,8.33,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","G74R I104M N120T E135R V173Y",5
"lib1","SARS-CoV-2","CCCGTCCGATTGTATG",3,55.16,8.35,-2.42,0.21,2.52,1.18,0.02,"1 nonsynonymous","Y175V",1
"lib1","SARS-CoV-2","CCCGTCTGGCGTATAA",4,1.52,NA,NA,NA,NA,NA,NA,"stop","N4* F12N F99C E141V",4
"lib1","SARS-CoV-2","CCCGTGAAAATGAACT",11,135.22,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P82N I88T D97P W106L L122W P169S",6
"lib1","SARS-CoV-2","CCCGTGAATCTCAGCC",9,95.94,9.86,-0.9,0.11,2.16,1.03,0,">1 nonsynonymous","C6S Q144R Q163Y",3
"lib1","SARS-CoV-2","CCCGTGATAGGTAAGT",1,21.87,10.5,-0.27,0.07,2.91,1.05,0,">1 nonsynonymous","T3W T55G G83K",3
"lib1","SARS-CoV-2","CCCGTGCTCGCTTCAG",2,80.86,10.82,0.05,0.05,2.96,1,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","CCCGTGGGACATGCAG",10,106.76,10.38,-0.39,0.04,2.93,1,0,">1 nonsynonymous","Y39R G83A Q168R",3
"lib1","SARS-CoV-2","CCCGTTAACCCAAGAC",2,14.43,10.66,-0.11,0.1,2.91,1.04,0.01,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","CCCGTTACAGATCACT",3,76.8,8.49,-2.27,0.13,1.87,1.11,0.01,">1 nonsynonymous","Y21D I28L",2
"lib1","SARS-CoV-2","CCCGTTACCTTCAGGA",5,57.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R27Q N58R G83I K87S Y93F Y119K R127S G146V",8
"lib1","SARS-CoV-2","CCCGTTACGTATTTGA",2,52.47,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D59I K94L G116K",3
"lib1","SARS-CoV-2","CCCGTTAGACCAAAAC",1,15.5,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T3L Y66E Y119P Y159R F185S",5
"lib1","SARS-CoV-2","CCCGTTAGTGAATGTA",8,68.06,10.18,-0.58,0.06,2.7,1.04,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","CCCGTTCTCCGTAACG",4,32.28,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G86A F99L W106G I138C",4
"lib1","SARS-CoV-2","CCCGTTCTTATCATCA",1,13.89,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","S41H G83C C158I T201A",4
"lib1","SARS-CoV-2","CCCGTTGAATACCGAC",1,7.85,10.75,-0.02,0.12,2.96,1,0.01,"1 nonsynonymous","N30P",1
"lib1","SARS-CoV-2","CCCGTTTACGCACTGA",3,11.6,6.73,-4.03,0.49,1.5,1.19,0.04,">1 nonsynonymous","V20L C61R",2
"lib1","SARS-CoV-2","CCCGTTTCTGTAGTTG",6,129.52,9.94,-0.82,0.07,2.08,1.04,0,"1 nonsynonymous","V11N",1
"lib1","SARS-CoV-2","CCCGTTTTTACAAATC",2,15.32,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V103Q",1
"lib1","SARS-CoV-2","CCCTAAAAAGCATGAC",10,40.15,6.2,-4.57,0.65,1.5,1.26,0.02,">1 nonsynonymous","I104D L122N S129Y",3
"lib1","SARS-CoV-2","CCCTAAAAATAGTATC",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G Y178M",2
"lib1","SARS-CoV-2","CCCTAAAAATAGTCTA",3,1.87,NA,NA,NA,NA,NA,NA,"stop","T3Q N64S I88R P149R G196*",5
"lib1","SARS-CoV-2","CCCTAAAAATCTAGAA",4,29.5,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S41L T63N D68R V103M N118L",5
"lib1","SARS-CoV-2","CCCTAAAACCCTCGTT",4,17.43,10.65,-0.11,0.09,2.84,1.07,0,">1 nonsynonymous","T55N L60G S129G",3
"lib1","SARS-CoV-2","CCCTAAAACGCTCCAT",6,3.04,NA,NA,NA,NA,NA,NA,"stop","S19* S113L",2
"lib1","SARS-CoV-2","CCCTAAAAGAATATTT",3,68.73,10.75,-0.01,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCCTAAAATCCATATA",3,33.11,10.67,-0.1,0.08,2.79,1.1,0,">1 nonsynonymous","A42Y K56I D90N L122T",4
"lib1","SARS-CoV-2","CCCTAAAATGTAACCG",1,14.2,8.94,-1.83,0.27,1.59,1.19,0.04,">1 nonsynonymous","T100A P177S",2
"lib1","SARS-CoV-2","CCCTAAAATGTTCGCC",8,238,10.75,-0.01,0.05,2.94,1.02,0,">1 nonsynonymous","V37M T55Y C61H",3
"lib1","SARS-CoV-2","CCCTAAACATTTATCG",2,22.14,10.87,0.11,0.09,2.84,1.11,0,">1 nonsynonymous","V37D Q163L",2
"lib1","SARS-CoV-2","CCCTAAAGCTTTAGGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","CCCTAAATAAAAAGAA",6,49.63,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T3I D34R N58M Y165W",4
"lib1","SARS-CoV-2","CCCTAAATACAGTATA",1,13.55,10.75,-0.01,0.22,2.57,1.33,0.02,"1 nonsynonymous","Q163V",1
"lib1","SARS-CoV-2","CCCTAAATACTGACTT",7,7.13,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22V S69L",2
"lib1","SARS-CoV-2","CCCTAAATGTTAACGT",1,45.78,9.18,-1.59,0.1,2.77,1.12,0,">1 nonsynonymous","L125R I138L",2
"lib1","SARS-CoV-2","CCCTAACAGATCTAAG",5,18.81,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","A81L G152I T201D",3
"lib1","SARS-CoV-2","CCCTAACAGTCAACTT",7,103.45,10.54,-0.22,0.04,2.95,1,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CCCTAACATCCTGCGT",3,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S S147Y",2
"lib1","SARS-CoV-2","CCCTAACCGTCCTCAA",3,44.87,7.94,-2.82,0.24,1.55,1.14,0.02,">1 nonsynonymous","E10G W106V K114G",3
"lib1","SARS-CoV-2","CCCTAACCTGTATTTT",2,22.39,10.47,-0.3,0.04,2.98,1.03,0,">1 nonsynonymous","A42R Q163N",2
"lib1","SARS-CoV-2","CCCTAACGATCTAAAC",1,0.84,NA,NA,NA,NA,NA,NA,"stop","L57* K198*",2
"lib1","SARS-CoV-2","CCCTAACGATTATATC",7,100.49,6.24,-4.53,0.92,1.5,1.22,0.04,">1 nonsynonymous","N1L E10G A14F Y50F C150V Y159N Q176R",7
"lib1","SARS-CoV-2","CCCTAACTTTTGGTGC",4,0.35,NA,NA,NA,NA,NA,NA,"stop","C6R S41V I104* P149F",4
"lib1","SARS-CoV-2","CCCTAAGAAGTTAAAG",2,22.46,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I80K T201Q",2
"lib1","SARS-CoV-2","CCCTAAGACCATAATC",3,127.2,8.48,-2.28,0.07,2.53,1.08,0,">1 nonsynonymous","C31I Y119F",2
"lib1","SARS-CoV-2","CCCTAAGATAGTATAG",4,54.05,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","R16A A33R N151S F167V",4
"lib1","SARS-CoV-2","CCCTAAGGAAGTTATG",6,101.23,8.62,-2.14,0.09,2.77,1.08,0,">1 nonsynonymous","S41R V52I Y119L P149S",4
"lib1","SARS-CoV-2","CCCTAAGTAAGAAACC",4,8.92,10.92,0.16,0.16,2.92,1,0.01,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","CCCTAAGTTATTGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","P54T E135I S200*",3
"lib1","SARS-CoV-2","CCCTAATAATAAAAAA",1,6.79,10.86,0.09,0.15,2.94,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCCTAATAGTCATCAA",2,74.71,10.77,0.01,0.05,2.92,1.04,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","CCCTAATCAAATATCA",1,12.05,10.21,-0.56,0.1,2.87,1.01,0,">1 nonsynonymous","D98S I142H",2
"lib1","SARS-CoV-2","CCCTAATGCAACATCG",1,1.21,NA,NA,NA,NA,NA,NA,"stop","Y35Q Y50Q K94R V103* V153F P161Q",6
"lib1","SARS-CoV-2","CCCTACAATTTCGACT",3,39.67,10.77,0.01,0.05,2.92,1.04,0,">1 nonsynonymous","G9N Q144N",2
"lib1","SARS-CoV-2","CCCTACATACAAAAGA",9,144,10.22,-0.55,0.05,2.79,1,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","CCCTACATGGCACCCT",1,37.03,6,-4.76,1.98,1.5,1.17,0.02,">1 nonsynonymous","N58L D68N D97V P197A",4
"lib1","SARS-CoV-2","CCCTACCAACTTCAAA",1,9.33,10.82,0.06,0.11,2.87,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTACCAGAAAACTA",1,33.6,9.38,-1.38,0.13,2.36,1.13,0.01,">1 nonsynonymous","K87C F99L T201N",3
"lib1","SARS-CoV-2","CCCTACCAGCCACTGA",4,1.29,NA,NA,NA,NA,NA,NA,"stop","V11T G116*",2
"lib1","SARS-CoV-2","CCCTACCATCTGGCCT",8,160.13,8.99,-1.77,0.17,1.59,1.13,0.01,"1 nonsynonymous","G86Q",1
"lib1","SARS-CoV-2","CCCTACCATTCCCAGC",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G R27L V65R L122T K132S",5
"lib1","SARS-CoV-2","CCCTACCCACATCCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8C V37Y C49* Y121E P133N",5
"lib1","SARS-CoV-2","CCCTACCCTATAGACA",1,82.05,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60W S129I G172I",3
"lib1","SARS-CoV-2","CCCTACCGAAATGACC",5,87.1,10.41,-0.35,0.04,2.84,1.05,0,">1 nonsynonymous","S29H N64R D90K",3
"lib1","SARS-CoV-2","CCCTACCTGTTATTAA",4,96.53,10.78,0.02,0.06,2.91,1.04,0,"1 nonsynonymous","S113A",1
"lib1","SARS-CoV-2","CCCTACGACGGGTGGC",1,29.66,6,-4.76,1.33,1.5,1.14,0,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","CCCTACGATGCCGCCT",4,197.55,NA,NA,NA,NA,NA,NA,"stop","A22V R25Q S36V S200*",4
"lib1","SARS-CoV-2","CCCTACTAAGGCAAAC",5,118.51,10.67,-0.1,0.03,2.93,1.03,0,">1 nonsynonymous","K56Q G116K",2
"lib1","SARS-CoV-2","CCCTACTCTACACAAT",3,10.69,10.66,-0.11,0.09,2.83,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTACTGGTAATTTG",5,59.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9L N40I N58T V71C D97V Q176L",6
"lib1","SARS-CoV-2","CCCTAGAAAAAGGAGT",6,155.37,10.62,-0.14,0.03,2.9,1.05,0,">1 nonsynonymous","E141S S147F",2
"lib1","SARS-CoV-2","CCCTAGAATGAAGCCA",4,39,9.67,-1.1,0.15,1.62,1.16,0.01,">1 nonsynonymous","T55N P96L S200F",3
"lib1","SARS-CoV-2","CCCTAGAGAGCAATGA",3,27.48,9.95,-0.82,0.15,2.36,1.08,0.01,">1 nonsynonymous","T55S K94Y",2
"lib1","SARS-CoV-2","CCCTAGATGACACAGA",1,14.13,6.87,-3.89,0.41,1.5,1.15,0.04,">1 nonsynonymous","K94I E154S",2
"lib1","SARS-CoV-2","CCCTAGCAAAAGAATA",12,60.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37T G117L D137P S164M",4
"lib1","SARS-CoV-2","CCCTAGCAAGAAAATC",3,33.58,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y35N G74R Y165P",3
"lib1","SARS-CoV-2","CCCTAGCAAGATGAGA",1,22.67,10.68,-0.09,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTAGCCTGAAATAA",3,32.62,8.76,-2.01,0.12,2.3,1.04,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","CCCTAGGATATAAGAT",1,10.42,6.08,-4.69,2,3,1.1,0.01,">1 nonsynonymous","S36V N40I Q176M",3
"lib1","SARS-CoV-2","CCCTAGGCTAATGCAA",1,26.92,6.53,-4.23,0.55,1.82,1.17,0.03,">1 nonsynonymous","S69R N110Q G172R",3
"lib1","SARS-CoV-2","CCCTAGGGGGTTTACC",8,119.4,10.79,0.03,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTAGTCTAAGGCGT",6,33.15,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T3E K26P P149M Q168R",4
"lib1","SARS-CoV-2","CCCTATAACGCACCCC",3,52.5,10.2,-0.56,0.06,2.78,1.07,0,"1 nonsynonymous","A81H",1
"lib1","SARS-CoV-2","CCCTATAATACAATAA",1,8.58,9.3,-1.46,0.33,1.5,1.23,0.06,">1 nonsynonymous","C6Y D98F",2
"lib1","SARS-CoV-2","CCCTATACAAACGGAC",4,94.06,10.04,-0.73,0.09,2.05,1.06,0,">1 nonsynonymous","S41D F62L W106A C195S",4
"lib1","SARS-CoV-2","CCCTATACCAGTATAG",6,42.29,10.71,-0.06,0.09,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTATATATAAAAAT",4,28.21,7.28,-3.48,0.16,1.67,1.1,0.01,">1 nonsynonymous","F12N S41H C61G L95V",4
"lib1","SARS-CoV-2","CCCTATCAACTTGCAA",2,101.02,6.59,-4.18,0.63,1.5,1.32,0.03,">1 nonsynonymous","G101V L122S K198Q",3
"lib1","SARS-CoV-2","CCCTATCACATTTTGG",1,38.27,9.94,-0.82,0.15,2.39,1.17,0.01,">1 nonsynonymous","A33D P149R",2
"lib1","SARS-CoV-2","CCCTATCGAAAATCCG",4,56.4,10.82,0.06,0.08,2.94,1.01,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","CCCTATCTGACAGATT",1,26.73,8.55,-2.21,0.15,2.65,1.01,0.01,">1 nonsynonymous","Y119E F185G",2
"lib1","SARS-CoV-2","CCCTATGACAGGTCAC",1,0.73,NA,NA,NA,NA,NA,NA,"stop","T55W V115W S129* N157V",4
"lib1","SARS-CoV-2","CCCTATGCCTAAGACG",3,41.9,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A89K G152C",2
"lib1","SARS-CoV-2","CCCTATGCTAGAATAA",1,24.73,10.72,-0.04,0.08,2.94,1.04,0,"1 nonsynonymous","N110R",1
"lib1","SARS-CoV-2","CCCTATGCTTCACTGT",3,19.98,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y91H D97L F167A",3
"lib1","SARS-CoV-2","CCCTATGTTGTGCATA",5,54.26,10.68,-0.08,0.05,2.94,1.03,0,"1 nonsynonymous","N64G",1
"lib1","SARS-CoV-2","CCCTATTAGGCAAATC",8,106.78,8.84,-1.92,0.11,1.93,1.09,0.01,">1 nonsynonymous","F47I F134L Y143L",3
"lib1","SARS-CoV-2","CCCTATTGCTAAAGTA",5,1.26,NA,NA,NA,NA,NA,NA,"stop","I2G L60Y D112E L122W K128* Y143M A190C",7
"lib1","SARS-CoV-2","CCCTATTGTATCGCCT",5,90.24,10.73,-0.03,0.05,2.86,1.06,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","CCCTCAAACTCGTCTA",3,1.06,NA,NA,NA,NA,NA,NA,"stop","C61* F62T L95V W106V",4
"lib1","SARS-CoV-2","CCCTCAAAGTCATAAG",8,75.88,6.64,-4.12,0.42,1.5,1.13,0.02,">1 nonsynonymous","T85E N157F Y165K",3
"lib1","SARS-CoV-2","CCCTCAAATTTTAGGA",7,0.7,NA,NA,NA,NA,NA,NA,"stop","N1W A14* S43R C49W L57P G155D C195L",7
"lib1","SARS-CoV-2","CCCTCAACATAGAGTC",6,69.98,10.8,0.04,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTCAACCAAGTCCA",7,30.39,6.56,-4.2,0.52,1.5,1.14,0.03,">1 nonsynonymous","N40P T63F E76Y K94N Q163K E186F",6
"lib1","SARS-CoV-2","CCCTCAAGATGTGCTT",3,33.1,8.63,-2.13,0.11,2.85,1.05,0,">1 nonsynonymous","A14S G117C",2
"lib1","SARS-CoV-2","CCCTCAATAAATATAT",3,45.09,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N107F S139N",2
"lib1","SARS-CoV-2","CCCTCACAGAATTACA",8,5.58,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","CCCTCACATACACTGA",1,5.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S S139F N151F N171M",4
"lib1","SARS-CoV-2","CCCTCACATCAGCCAA",3,26.23,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F126G G155L",2
"lib1","SARS-CoV-2","CCCTCACCAGATAGGG",5,51.23,10.82,0.05,0.06,2.93,1.04,0,"1 nonsynonymous","H189V",1
"lib1","SARS-CoV-2","CCCTCACCCCACCCGA",10,43.38,6.04,-4.72,1.42,1.5,1.25,0.04,">1 nonsynonymous","C49K C61S F167V",3
"lib1","SARS-CoV-2","CCCTCACCCTCAAAAG",4,25.78,6,-4.76,2,2.32,1.08,0,">1 nonsynonymous","P7L C49Q A89C G117N P149A P169L",6
"lib1","SARS-CoV-2","CCCTCACCGTAAACCT",1,6.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V D97L N109L",3
"lib1","SARS-CoV-2","CCCTCACGTCCCCGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N40* T63S",2
"lib1","SARS-CoV-2","CCCTCACGTGCCCATT",2,74.67,6.19,-4.57,0.88,1.5,1.25,0.03,">1 nonsynonymous","P82L N107G",2
"lib1","SARS-CoV-2","CCCTCACTAACTGGTA",9,1.66,NA,NA,NA,NA,NA,NA,"stop","D98H S139N Y175*",3
"lib1","SARS-CoV-2","CCCTCAGAACTCCGGC",2,26.91,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2R C158Y",2
"lib1","SARS-CoV-2","CCCTCAGCCAACGAAT",18,343.85,10.81,0.05,0.07,2.89,1.06,0,">1 nonsynonymous","A22M S147N",2
"lib1","SARS-CoV-2","CCCTCAGGGGTGTACA",4,25.91,6,-4.76,0.88,3,1.18,0.01,">1 nonsynonymous","N24G F44E G51V K199R",4
"lib1","SARS-CoV-2","CCCTCAGTATGAGCAG",2,8.6,9.5,-1.26,0.14,1.82,1.16,0.01,">1 nonsynonymous","N4R S41L P54V E135L",4
"lib1","SARS-CoV-2","CCCTCATAGCTGAGAA",2,50.44,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C49I S129C G155Y",3
"lib1","SARS-CoV-2","CCCTCATCCCACTACT",2,11.14,10.84,0.08,0.2,2.89,1,0.01,">1 nonsynonymous","N1T A33V K128M P177C",4
"lib1","SARS-CoV-2","CCCTCATCCTGTATAT",9,147.36,6,-4.76,1.54,1.5,1.31,0.04,">1 nonsynonymous","T55S D90L I142M G166E P177F",5
"lib1","SARS-CoV-2","CCCTCATGCCCACTTT",2,8.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1W G9T R27A F70V N171G L183H",6
"lib1","SARS-CoV-2","CCCTCATTTTCAAGGA",3,149.64,10.13,-0.63,0.03,2.83,1.06,0,">1 nonsynonymous","G174L Q176N",2
"lib1","SARS-CoV-2","CCCTCCAAATCACTTC",4,32.65,10.24,-0.52,0.05,2.96,1,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","CCCTCCAAGAGAAGAT",1,11.6,7.7,-3.07,0.38,1.5,1.03,0.07,">1 nonsynonymous","N1W W106I",2
"lib1","SARS-CoV-2","CCCTCCAATCTACTAC",2,50.68,10.53,-0.24,0.05,2.95,1,0,"1 nonsynonymous","T148C",1
"lib1","SARS-CoV-2","CCCTCCACTTTCGTAC",6,90.98,10.74,-0.03,0.03,2.88,1.07,0,"1 nonsynonymous","L60C",1
"lib1","SARS-CoV-2","CCCTCCATACAGATGA",4,80.47,9.06,-1.7,0.12,2.55,1.14,0.01,">1 nonsynonymous","F134S Q144C P197T",3
"lib1","SARS-CoV-2","CCCTCCATACGAAGCA",2,88.58,8.18,-2.58,0.17,1.96,1.09,0.01,">1 nonsynonymous","Q176F K198G",2
"lib1","SARS-CoV-2","CCCTCCATACTATGTT",4,452.08,6,-4.76,1.59,1.5,1.23,0.02,">1 nonsynonymous","F134W I142Y G155Y Q176R",4
"lib1","SARS-CoV-2","CCCTCCATTATGACAT",3,70.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L131R T201L",2
"lib1","SARS-CoV-2","CCCTCCCACAACTCAT",3,67.42,10.66,-0.1,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTCCCATATAATAT",4,12.54,6.24,-4.52,0.87,1.5,1.18,0.02,">1 nonsynonymous","P7L T15Y R136E",3
"lib1","SARS-CoV-2","CCCTCCCCAGGTATGC",2,0.26,NA,NA,NA,NA,NA,NA,"stop","G86K D98* A145L",3
"lib1","SARS-CoV-2","CCCTCCCCGATTCGAT",1,35.07,8.25,-2.51,0.2,2.2,1.14,0.02,">1 nonsynonymous","K48H Y119G G155H",3
"lib1","SARS-CoV-2","CCCTCCCCTTCCCCAT",11,128.96,10.73,-0.03,0.06,2.92,1.02,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","CCCTCCTGATCAAGCT",2,24.69,6.33,-4.44,0.65,1.5,1.16,0.02,">1 nonsynonymous","G83L I88C S129M",3
"lib1","SARS-CoV-2","CCCTCCTTACCTTTAA",1,13.59,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N107F K128V",2
"lib1","SARS-CoV-2","CCCTCGAACCAAAACG",2,29.3,10.67,-0.1,0.1,2.86,1.1,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","CCCTCGACGGTAGAAG",2,11.18,6.61,-4.15,0.87,2.35,1.1,0.01,">1 nonsynonymous","F99P K128F",2
"lib1","SARS-CoV-2","CCCTCGACGTGGACAA",2,6.88,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9K R25T C49T I80S D97S G116M",6
"lib1","SARS-CoV-2","CCCTCGACTCTAACAT",2,31.25,8.81,-1.95,0.16,1.5,1.1,0.01,">1 nonsynonymous","T3V G9A L122S S139I E141R A190V",6
"lib1","SARS-CoV-2","CCCTCGCCCACGCCTA",5,1.96,NA,NA,NA,NA,NA,NA,"stop","N58I D112* G174S",3
"lib1","SARS-CoV-2","CCCTCGGCCCGGACTG",7,65.54,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A18L K26V Y93S",3
"lib1","SARS-CoV-2","CCCTCGTACGATGTAA",1,33.41,10.41,-0.36,0.08,2.91,1.04,0,">1 nonsynonymous","T55K T85L",2
"lib1","SARS-CoV-2","CCCTCGTATAATGCAA",1,43.11,10.82,0.05,0.07,2.97,1,0,"1 nonsynonymous","P54L",1
"lib1","SARS-CoV-2","CCCTCGTTCTGAAACA",8,150.72,10.71,-0.06,0.06,2.95,1.03,0,">1 nonsynonymous","E141Q P191H",2
"lib1","SARS-CoV-2","CCCTCGTTGAAGAATT",4,19.7,7.97,-2.8,0.32,1.61,1.24,0.03,">1 nonsynonymous","D34N D90R I142K",3
"lib1","SARS-CoV-2","CCCTCGTTTCCCTGCA",3,65.8,10.73,-0.03,0.05,2.99,1,0,"1 nonsynonymous","F47V",1
"lib1","SARS-CoV-2","CCCTCTAAACGATTTA",6,13.88,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14T C61F C102A",3
"lib1","SARS-CoV-2","CCCTCTAACTGCCCCG",9,150.46,10.75,-0.01,0.07,2.89,1.06,0,">1 nonsynonymous","V37S T201L",2
"lib1","SARS-CoV-2","CCCTCTAATGCTGCCT",8,78.78,10.76,0,0.04,2.89,1.05,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","CCCTCTACAACTATCA",6,53.64,10.43,-0.34,0.06,2.94,1.01,0,">1 nonsynonymous","D90V P197R",2
"lib1","SARS-CoV-2","CCCTCTACCCAAAGAG",6,110.98,8.72,-2.04,0.11,2.77,1.07,0.01,">1 nonsynonymous","N64T S113I S164K",3
"lib1","SARS-CoV-2","CCCTCTACGATTAGCC",10,85.53,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N40F Q84P C158Y",3
"lib1","SARS-CoV-2","CCCTCTAGCAATTTCC",5,131.02,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","P7T V37I F99C K199S",4
"lib1","SARS-CoV-2","CCCTCTCAAGAATATA",1,40.42,10.4,-0.36,0.06,2.89,1.06,0,">1 nonsynonymous","N120H G155M",2
"lib1","SARS-CoV-2","CCCTCTCCTTATCCCA",3,11.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49G G116N R179K",3
"lib1","SARS-CoV-2","CCCTCTCCTTGCTGGA",2,34.55,10.24,-0.52,0.07,2.77,1.08,0,">1 nonsynonymous","T3G I28F W106V",3
"lib1","SARS-CoV-2","CCCTCTCTAAACCATG",6,4.19,NA,NA,NA,NA,NA,NA,"stop","V65K D75* D112W",3
"lib1","SARS-CoV-2","CCCTCTGCAATCTACT",1,26.51,10.59,-0.17,0.06,2.79,1.21,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","CCCTCTGCTTAAGCGA",2,1.67,NA,NA,NA,NA,NA,NA,"stop","S29* T100K I104M P197T",4
"lib1","SARS-CoV-2","CCCTCTGGTCAACTGA",3,71.3,10.73,-0.03,0.05,2.9,1.07,0,"1 nonsynonymous","C61H",1
"lib1","SARS-CoV-2","CCCTCTGGTTAAACAA",1,47.11,6.96,-3.8,0.54,1.5,1.11,0.06,">1 nonsynonymous","N118L C150V",2
"lib1","SARS-CoV-2","CCCTCTGTCTTAAATA",4,48.9,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","T46G K56S S69G G74V",4
"lib1","SARS-CoV-2","CCCTCTTAACCCCCTG",4,20.78,6,-4.76,2,3,1.11,0,">1 nonsynonymous","E10W R16T C158F G166H",4
"lib1","SARS-CoV-2","CCCTCTTTGTCCATAG",13,156.37,10.72,-0.04,0.04,2.94,1.03,0,">1 nonsynonymous","I2V G9T",2
"lib1","SARS-CoV-2","CCCTGAAAAATTATAG",3,13.48,10.75,-0.01,0.12,2.95,1.05,0.01,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","CCCTGAAAACCGAACG",3,33.22,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12R Y91M F167S",3
"lib1","SARS-CoV-2","CCCTGAAACGTGATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","D112E I138* N151*",3
"lib1","SARS-CoV-2","CCCTGAACCATAAAAC",1,33.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S36E Y50H D59Q Y119D I142Y P177Y",6
"lib1","SARS-CoV-2","CCCTGAAGAGAAATTG",10,1.06,NA,NA,NA,NA,NA,NA,"stop","L60* Q84I",2
"lib1","SARS-CoV-2","CCCTGACCATAAAGGA",3,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C G86R Y121T G166A",4
"lib1","SARS-CoV-2","CCCTGACCCACAATTT",6,70,10.4,-0.37,0.03,2.87,1.02,0,">1 nonsynonymous","N4S G83D",2
"lib1","SARS-CoV-2","CCCTGACCGTAGCCTA",4,85.92,9.91,-0.86,0.14,2.11,1.04,0.01,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","CCCTGACCTTTGATTA",4,36.64,10.8,0.04,0.08,2.93,1.04,0,"1 nonsynonymous","P54K",1
"lib1","SARS-CoV-2","CCCTGACTCAAAGCTA",5,66.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F70E P96N K132T",3
"lib1","SARS-CoV-2","CCCTGACTGATGAGCC",3,52.2,7.8,-2.96,0.16,1.52,1.12,0.01,">1 nonsynonymous","R127A G146R",2
"lib1","SARS-CoV-2","CCCTGAGAGAAGCTCC",5,99.11,10.77,0,0.09,2.96,1.03,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","CCCTGAGATAATTAAA",4,44.7,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D59I Q79L W106D A145L G155V T201L",6
"lib1","SARS-CoV-2","CCCTGAGTTAAACATT",2,1.52,NA,NA,NA,NA,NA,NA,"stop","K128S G146P V173*",3
"lib1","SARS-CoV-2","CCCTGATACCACAGTA",6,73.92,9.96,-0.8,0.08,2.88,1.02,0,">1 nonsynonymous","D90S E154V",2
"lib1","SARS-CoV-2","CCCTGATAGCCTAACT",4,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y V20D Y121G",3
"lib1","SARS-CoV-2","CCCTGATCCTAGTTAA",1,37.7,9.64,-1.12,0.09,2.97,1,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","CCCTGATCGACCACGG",8,1.11,NA,NA,NA,NA,NA,NA,"stop","Y50F P82* S108K",3
"lib1","SARS-CoV-2","CCCTGATGACATCAAC",4,88.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44C C158V S184F",3
"lib1","SARS-CoV-2","CCCTGCATCACGTCCA",5,42.19,10.75,-0.01,0.06,2.95,1,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","CCCTGCCGCCTAAACT",3,43.1,6,-4.76,1.05,1.5,1.1,0.01,">1 nonsynonymous","G116N N157F G174L",3
"lib1","SARS-CoV-2","CCCTGCCTCTAGAAGG",5,97.06,8.34,-2.43,0.11,2.26,1.12,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","CCCTGCGCAAAACCCA",2,16.36,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R16Y V37C S43V A67P V103N",5
"lib1","SARS-CoV-2","CCCTGCGTTCTCGCTT",3,120.96,10.77,0.01,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTGCTACAATCATG",4,137.57,8.91,-1.85,0.07,2.74,1.09,0,">1 nonsynonymous","T100N G117K",2
"lib1","SARS-CoV-2","CCCTGCTCCAGGGGTA",7,168.37,10.4,-0.36,0.05,2.82,1.05,0,">1 nonsynonymous","A81T T201M",2
"lib1","SARS-CoV-2","CCCTGGACAGATGTGC",1,28.93,9.01,-1.76,0.23,1.52,1.21,0.03,">1 nonsynonymous","G9I D34G K128P T148F S164T",5
"lib1","SARS-CoV-2","CCCTGGACGAAAACAA",1,42.82,10.63,-0.14,0.09,2.84,1.1,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","CCCTGGAGGGGACGGC",3,53.66,6,-4.76,1.22,1.5,1.13,0.01,">1 nonsynonymous","K48V D68W S129V S184K",4
"lib1","SARS-CoV-2","CCCTGGATAACATGAG",1,2.67,NA,NA,NA,NA,NA,NA,"stop","F17G S69* G86F V103* F167L",5
"lib1","SARS-CoV-2","CCCTGGCCATCACCCT",3,12.73,6.46,-4.31,1.73,1.5,1.17,0.02,">1 nonsynonymous","A89Q L95P",2
"lib1","SARS-CoV-2","CCCTGGCGTCTCGTGG",2,7.71,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","R16V D59L I88W T170L",4
"lib1","SARS-CoV-2","CCCTGGGAGAACCTTG",6,46.38,10.42,-0.35,0.04,2.92,1.02,0,">1 nonsynonymous","L5I L60N L111R",3
"lib1","SARS-CoV-2","CCCTGGGATGATTCTT",4,17.36,10.82,0.06,0.07,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTGGGCTGTACTAA",1,8.13,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y39W P96N W106R Y123N K128P",5
"lib1","SARS-CoV-2","CCCTGGTAGGGATTAT",3,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123P Y165N",2
"lib1","SARS-CoV-2","CCCTGTAACGTGCCTC",1,22.21,7.97,-2.79,0.44,1.5,1.06,0.06,">1 nonsynonymous","V77S G146Y",2
"lib1","SARS-CoV-2","CCCTGTATTTACTCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","V20T D90N I142* T201H",4
"lib1","SARS-CoV-2","CCCTGTATTTTGTAAC",4,77.5,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","T55L G86W Y91T N171T",4
"lib1","SARS-CoV-2","CCCTGTCACCCTCACA",13,307.28,10.41,-0.36,0.04,2.77,1.07,0,"1 nonsynonymous","P161A",1
"lib1","SARS-CoV-2","CCCTGTCCAGGGGAGC",11,146.85,7.53,-3.24,0.09,2.02,1.12,0,"1 nonsynonymous","C158T",1
"lib1","SARS-CoV-2","CCCTGTCCCGTAATTT",8,50.76,6.85,-3.91,0.31,1.5,1.16,0.02,">1 nonsynonymous","K56L N107T Y123M Q144A Q163T",5
"lib1","SARS-CoV-2","CCCTGTGAGAATGACG",2,25.71,9.37,-1.39,0.11,2.47,1.11,0,">1 nonsynonymous","D98A G152S P169V",3
"lib1","SARS-CoV-2","CCCTGTGAGCTGGAAC",2,84.83,9.58,-1.18,0.08,2.78,1.16,0,">1 nonsynonymous","Y119G S200P",2
"lib1","SARS-CoV-2","CCCTGTGCACCGCATG",4,8.45,NA,NA,NA,NA,NA,NA,"stop","F70* S113V",2
"lib1","SARS-CoV-2","CCCTGTTAACAAAAGT",8,6.07,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3N A42L L131S G152M T201W",5
"lib1","SARS-CoV-2","CCCTGTTCATTCTTGA",3,15.42,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S36K W106L Y165I T201M",4
"lib1","SARS-CoV-2","CCCTTAAACACCTTTA",1,5.51,6.16,-4.61,1.83,3,1.08,0.01,">1 nonsynonymous","C6F A42W Y66L W106Y",4
"lib1","SARS-CoV-2","CCCTTAAACAGGCAAC",5,34.75,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A89E N157E T193I",3
"lib1","SARS-CoV-2","CCCTTAAACGGATAAC",5,145.85,9.64,-1.12,0.07,2.61,1.06,0,">1 nonsynonymous","T3I A33Y P169L Y178S",4
"lib1","SARS-CoV-2","CCCTTAAACTCATTAT",5,49.12,9.8,-0.97,0.06,1.98,1.05,0,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","CCCTTAACTACAAACC",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35M F44* N107S",3
"lib1","SARS-CoV-2","CCCTTAACTAGGGGAA",8,134.46,10.6,-0.16,0.03,2.92,1,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","CCCTTAACTTATTAAC",2,7.05,6,-4.76,2,1.5,1.05,0.02,">1 nonsynonymous","T100P T148M Q168M G174Q",4
"lib1","SARS-CoV-2","CCCTTAACTTTTGAAA",2,15.88,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y50N T148F P191V",3
"lib1","SARS-CoV-2","CCCTTAAGACCTATAA",3,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E E135A E141I V182G G196A T201A",6
"lib1","SARS-CoV-2","CCCTTAAGAGCATAGA",1,19.31,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","K48F V103E P177R",3
"lib1","SARS-CoV-2","CCCTTAAGGCCGGGGT",4,47.25,10.69,-0.08,0.07,2.91,1.09,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","CCCTTAATCTCATTGT",3,3.75,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","CCCTTAATGAAAAATG",16,181.85,10.22,-0.54,0.04,2.8,1.03,0,">1 nonsynonymous","P96T T201Q",2
"lib1","SARS-CoV-2","CCCTTAATTACCGTGC",1,9.14,6.5,-4.26,0.74,1.5,1.04,0.07,">1 nonsynonymous","D90Q L95D Q168F",3
"lib1","SARS-CoV-2","CCCTTACACACTAAAC",4,72.19,10.32,-0.45,0.07,2.86,1,0,"1 nonsynonymous","V11M",1
"lib1","SARS-CoV-2","CCCTTACAGTAGCAAA",2,29.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N4I L38W T100F A105Y A145Y",5
"lib1","SARS-CoV-2","CCCTTACATAGCGTGT",1,9.21,10.75,-0.01,0.11,2.81,1.02,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","CCCTTACCACGATCAT",3,20.11,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","L95E",1
"lib1","SARS-CoV-2","CCCTTACCATCTGAAT",2,23,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I88A Q144H",2
"lib1","SARS-CoV-2","CCCTTACTAAGAGGGA",1,8.61,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","C49V V77Y E135R P169F",4
"lib1","SARS-CoV-2","CCCTTACTGCAAAGTG",2,7.58,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F44S A89R",2
"lib1","SARS-CoV-2","CCCTTACTTAATCGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","L57F G101V W106* C158N",4
"lib1","SARS-CoV-2","CCCTTACTTACTCAAC",1,32.66,9.94,-0.83,0.13,1.93,1.17,0.01,">1 nonsynonymous","F17T T148S",2
"lib1","SARS-CoV-2","CCCTTAGATAACACAA",1,12.57,10.25,-0.52,0.12,2.84,1,0.01,">1 nonsynonymous","A18R K198V",2
"lib1","SARS-CoV-2","CCCTTAGCCGGCAAAT",8,156.09,10.24,-0.53,0.05,2.75,1.06,0,">1 nonsynonymous","S45V K56S",2
"lib1","SARS-CoV-2","CCCTTAGTAATCTTAC",4,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98T I104S D112F L183S K198T",5
"lib1","SARS-CoV-2","CCCTTAGTCAGGTTTG",1,13.44,10.74,-0.02,0.06,2.94,1.06,0,">1 nonsynonymous","K56S K199N",2
"lib1","SARS-CoV-2","CCCTTATACCGATTAA",6,95.21,10.86,0.1,0.11,2.7,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTTATACTACACTT",4,98.72,10.65,-0.12,0.05,2.9,1.07,0,">1 nonsynonymous","S41E T140A",2
"lib1","SARS-CoV-2","CCCTTATGACACTCCA",1,13.31,10.69,-0.08,0.14,2.89,1,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CCCTTATGACGCAGAA",3,76.88,9.55,-1.22,0.06,2.95,1.04,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","CCCTTATTAAGTTCCG",6,24.86,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","C61V N107I K128A A190F",4
"lib1","SARS-CoV-2","CCCTTATTACTCCCAA",4,10.47,10.23,-0.54,0.18,2.73,1.08,0.02,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","CCCTTCAATGCAAACA",3,17.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10I A14V I104S Q168R",4
"lib1","SARS-CoV-2","CCCTTCACCTATTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4W C61Y V77R T148*",4
"lib1","SARS-CoV-2","CCCTTCAGGAGCACCA",4,66.43,9.48,-1.28,0.14,1.54,1.11,0.01,">1 nonsynonymous","N30A I80M",2
"lib1","SARS-CoV-2","CCCTTCATTGCCAATA",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R S45W T100Y G155I",4
"lib1","SARS-CoV-2","CCCTTCCATCTCGGCG",3,138.27,10.44,-0.32,0.03,2.95,1.01,0,">1 nonsynonymous","P149L V153W T201Y",3
"lib1","SARS-CoV-2","CCCTTCCCAATTGACA",8,692.7,9.88,-0.89,0.05,2.8,1.02,0,">1 nonsynonymous","I2A I142K",2
"lib1","SARS-CoV-2","CCCTTCCCTTAGCACG",5,9.81,NA,NA,NA,NA,NA,NA,"stop","Y35M S41H N64G I104K N151E T201*",6
"lib1","SARS-CoV-2","CCCTTCCGAGACCTGC",1,11.64,9.87,-0.89,0.14,2.02,1,0.01,"1 nonsynonymous","F185P",1
"lib1","SARS-CoV-2","CCCTTCCGAGGCATAC",7,268.22,10.25,-0.51,0.05,2.79,1.01,0,"1 nonsynonymous","K94C",1
"lib1","SARS-CoV-2","CCCTTCGAACGAATGA",8,1.18,NA,NA,NA,NA,NA,NA,"stop","V52L D68L A89* K94S S139P",5
"lib1","SARS-CoV-2","CCCTTCTGCGGCTACA",11,71.73,9.65,-1.11,0.28,1.5,1,0.04,">1 nonsynonymous","E76Y N110K E135V",3
"lib1","SARS-CoV-2","CCCTTCTTATCTTTGG",2,17.77,6.3,-4.46,0.7,1.5,1.13,0.03,">1 nonsynonymous","V65A V77A K87Q N107H F126K",5
"lib1","SARS-CoV-2","CCCTTGAAGAGAAAAG",9,0.82,NA,NA,NA,NA,NA,NA,"stop","C61F T85K V115* P161F",4
"lib1","SARS-CoV-2","CCCTTGACCTACCACA",1,51.74,10.56,-0.2,0.05,2.98,1.02,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","CCCTTGACGGCCTCGG",3,5.43,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I80M G86W S129D",3
"lib1","SARS-CoV-2","CCCTTGAGGCATAACT",6,2.28,NA,NA,NA,NA,NA,NA,"stop","A105G G146I K199*",3
"lib1","SARS-CoV-2","CCCTTGAGTTTTTAAA",4,119.16,10.68,-0.09,0.06,2.92,1.04,0,"1 nonsynonymous","H189Y",1
"lib1","SARS-CoV-2","CCCTTGCATCACGTAC",7,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30L L38F T63Q T85R P191Q",5
"lib1","SARS-CoV-2","CCCTTGCCTAAAGGAA",4,59.82,10.86,0.1,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCCTTGCCTGATGGAC",5,23.88,6,-4.76,2,3,1.11,0,">1 nonsynonymous","T63C G86R A105S C150I G196W",5
"lib1","SARS-CoV-2","CCCTTGCGATTAATGA",1,14.51,10.15,-0.61,0.15,2.64,1.05,0.02,">1 nonsynonymous","Y35S L60C K198T",3
"lib1","SARS-CoV-2","CCCTTGCGCATGGTCC",3,104.24,10.44,-0.32,0.04,2.93,1.05,0,">1 nonsynonymous","R27E K94H",2
"lib1","SARS-CoV-2","CCCTTGGCAGGGAGGC",4,81.32,6,-4.76,0.86,1.5,1.15,0.01,">1 nonsynonymous","N4C P82Q P96C N120W",4
"lib1","SARS-CoV-2","CCCTTGGGTACTAAAT",6,60.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8D S19L P96L D112V N157C",5
"lib1","SARS-CoV-2","CCCTTGGTCGACATAC",3,11.84,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G74S Y123H Y159L",3
"lib1","SARS-CoV-2","CCCTTGGTGACCTAAC",1,42.85,10.79,0.03,0.09,2.86,1.1,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","CCCTTGTATATCAAAA",7,0.67,NA,NA,NA,NA,NA,NA,"stop","T55W I88F D98* T140V",4
"lib1","SARS-CoV-2","CCCTTGTTTCTAACTT",3,7.43,6.12,-4.64,2,1.5,1.09,0.02,">1 nonsynonymous","A22Y D59R A81G L183R",4
"lib1","SARS-CoV-2","CCCTTTAAAAGAACGA",5,3.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","CCCTTTAAATTCTATG",2,46.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D59M T85L D112L Y123S V173R L187V",6
"lib1","SARS-CoV-2","CCCTTTAACGAGACGC",2,17.06,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N64V L95N K128E S200N",4
"lib1","SARS-CoV-2","CCCTTTAATAAGATTT",4,59.96,10.45,-0.31,0.06,2.82,1.08,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","CCCTTTACAAAGACTG",5,78.34,9.82,-0.94,0.13,1.84,1.07,0.01,">1 nonsynonymous","D34Q A67L A105W",3
"lib1","SARS-CoV-2","CCCTTTACTACATCAA",12,278.24,9.05,-1.72,0.11,2.1,1.1,0,">1 nonsynonymous","N40E Q176R",2
"lib1","SARS-CoV-2","CCCTTTATAAATCTGC",1,7.72,8.34,-2.43,0.31,1.5,1.1,0.04,">1 nonsynonymous","C31I Q144L L188N",3
"lib1","SARS-CoV-2","CCCTTTATACGGGGTT",2,47.54,10.76,0,0.1,2.91,1.05,0,"1 nonsynonymous","E154T",1
"lib1","SARS-CoV-2","CCCTTTCATAACTAAT",5,41.8,6,-4.76,1.68,1.5,1.11,0.01,">1 nonsynonymous","S45D G83N S113P N120H G155V T201G",6
"lib1","SARS-CoV-2","CCCTTTCATAAGTCCA",10,3.97,NA,NA,NA,NA,NA,NA,"stop","N40* S108T I138A",3
"lib1","SARS-CoV-2","CCCTTTCCACCGAAAC",1,48.43,9.82,-0.95,0.1,2.14,1.06,0,">1 nonsynonymous","K48E K56W T63G V173Y",4
"lib1","SARS-CoV-2","CCCTTTCCTAACATAT",3,9.58,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F12E F99T G146W L162H",4
"lib1","SARS-CoV-2","CCCTTTGATTCCGAAA",3,40.68,6.54,-4.22,0.51,1.5,1.18,0.02,">1 nonsynonymous","S29E V37P L183K P197Q",4
"lib1","SARS-CoV-2","CCCTTTGCTCTGACCA",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I F12K",2
"lib1","SARS-CoV-2","CCCTTTGGAGCCCCGA",5,170.05,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2M Y39L N107K P133V G166W",5
"lib1","SARS-CoV-2","CCCTTTTCAGCAGTGT",2,14.97,10.54,-0.23,0.13,2.88,1.11,0.01,">1 nonsynonymous","N24Q G83N T148L",3
"lib1","SARS-CoV-2","CCCTTTTCCTGTTTTG",3,23.05,6,-4.76,1.39,1.5,1.15,0.02,">1 nonsynonymous","T55N F99N G152S S200Y",4
"lib1","SARS-CoV-2","CCCTTTTTAAGTTTAC",6,78.28,10.73,-0.04,0.06,2.91,1.06,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","CCGAAAAAAATTTAAT",1,42.57,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A18E G51C P133R",3
"lib1","SARS-CoV-2","CCGAAAAAAGAATAAA",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V A89L G152V",3
"lib1","SARS-CoV-2","CCGAAAAACAGTTTAA",2,75.37,9.99,-0.77,0.07,2.24,1.07,0,">1 nonsynonymous","L38S F160A A192D K198G",4
"lib1","SARS-CoV-2","CCGAAAAACATGCATA",2,12.4,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","T3P I80V L131S",3
"lib1","SARS-CoV-2","CCGAAAAACGACTCGA",1,8.42,6,-4.76,2,1.5,1.16,0.03,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","CCGAAAACCGAAACAG",1,37.35,10.74,-0.03,0.08,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGAAAAGAGTGTGCT",1,5.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19T T63S L131Q",3
"lib1","SARS-CoV-2","CCGAAAAGCCGTTGGC",1,17.58,6,-4.76,0.54,3,1.09,0,">1 nonsynonymous","F99E L131W",2
"lib1","SARS-CoV-2","CCGAAAATACCCAAGG",4,87.86,7.22,-3.54,0.22,1.5,1.13,0.01,">1 nonsynonymous","N4L G86H",2
"lib1","SARS-CoV-2","CCGAAACAAATATTTC",9,30.72,6,-4.76,2,2.79,1.11,0,">1 nonsynonymous","I2L F70V V173F",3
"lib1","SARS-CoV-2","CCGAAACAACTAGCTA",3,32.94,8.69,-2.07,0.19,1.5,1.1,0.02,">1 nonsynonymous","V11W Y66A S129R G152T",4
"lib1","SARS-CoV-2","CCGAAACATTGCGCAT",4,126.84,10.66,-0.11,0.03,2.91,1.04,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","CCGAAACCAAACGACA",3,8.81,10.63,-0.13,0.14,2.79,1.13,0.01,"1 nonsynonymous","Y39E",1
"lib1","SARS-CoV-2","CCGAAACCACGGCACA",4,71.24,10.18,-0.59,0.05,2.95,1,0,">1 nonsynonymous","V11C L122S S164Q",3
"lib1","SARS-CoV-2","CCGAAACCTATTAATG",5,39.11,10.04,-0.72,0.11,2.4,1.02,0.01,"1 nonsynonymous","P133R",1
"lib1","SARS-CoV-2","CCGAAACGTCTTAGGG",10,52.13,6.09,-4.67,0.57,1.5,1.21,0.01,">1 nonsynonymous","S53Y Q84N Y121K",3
"lib1","SARS-CoV-2","CCGAAACTATGTACGA",9,48.05,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F70L G174W",2
"lib1","SARS-CoV-2","CCGAAACTGATACTAT",6,652.61,10.45,-0.32,0.04,2.91,1.02,0,">1 nonsynonymous","A42W Y123S",2
"lib1","SARS-CoV-2","CCGAAACTTTTATCAA",3,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M K26V S36L P54T V71Q V77M Y91T V182S",8
"lib1","SARS-CoV-2","CCGAAAGACCATCCCA",1,1.77,NA,NA,NA,NA,NA,NA,"stop","T15N G155* V173N",3
"lib1","SARS-CoV-2","CCGAAAGACTCGCCAT",4,122.27,8.8,-1.97,0.08,2.77,1.11,0,">1 nonsynonymous","S129L G166K",2
"lib1","SARS-CoV-2","CCGAAAGATGACTATG",5,28.93,6,-4.76,0.7,1.5,1.15,0.01,">1 nonsynonymous","N4K A18T Y35N K48R N107I Y121H E135D G146L",8
"lib1","SARS-CoV-2","CCGAAAGCAAGTCACG",1,44.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S29G T100P G117R",3
"lib1","SARS-CoV-2","CCGAAAGCAGATTCCA",3,63.56,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6W R27S Y35A L57V R136A",5
"lib1","SARS-CoV-2","CCGAAAGCATAGCGAA",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F F99D",2
"lib1","SARS-CoV-2","CCGAAAGCGCATATCA",17,259.79,10.75,-0.02,0.06,2.89,1.08,0,">1 nonsynonymous","T148S T201S",2
"lib1","SARS-CoV-2","CCGAAAGGAGAAGGAA",2,28.17,8.48,-2.29,0.2,2.9,1.04,0.01,">1 nonsynonymous","K87S G166Y",2
"lib1","SARS-CoV-2","CCGAAAGGCCATGTTT",1,8.05,10.22,-0.55,0.13,2.93,1.04,0,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","CCGAAAGTAACATCTG",1,14.02,6.77,-3.99,0.56,1.5,1.03,0.07,">1 nonsynonymous","D137P G146R F160A",3
"lib1","SARS-CoV-2","CCGAAATAGCCCTGGC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T3L S45D Y121*",3
"lib1","SARS-CoV-2","CCGAAATAGTTAAGTC",4,133.1,8.8,-1.96,0.12,2.22,1.14,0.01,">1 nonsynonymous","T46L V115Y G174L Y178T",4
"lib1","SARS-CoV-2","CCGAAATCACCAGAAT",8,109.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A105C N120L K132L G172W",4
"lib1","SARS-CoV-2","CCGAAATCGGTATAAG",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82E G83D Y119C T201L",4
"lib1","SARS-CoV-2","CCGAAATTAATGGCCT",3,17.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9T G101F T170P T201R",4
"lib1","SARS-CoV-2","CCGAAATTATTTCATA",6,119.12,10.8,0.04,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGAACAAACGATACA",5,96.77,9.79,-0.97,0.1,2.12,1.08,0,">1 nonsynonymous","T85Y P133D",2
"lib1","SARS-CoV-2","CCGAACAACATGTAGT",3,31.8,10.83,0.07,0.1,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGAACACATAGATAC",7,3.58,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCGAACACGGAGTGAG",2,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D68Y Y91T D97N G117A E141T",6
"lib1","SARS-CoV-2","CCGAACACTGCGGAGG",5,21.36,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N64P F167T T201L",3
"lib1","SARS-CoV-2","CCGAACACTTAACAAG",4,44.19,8.32,-2.44,0.11,2.23,1.09,0,">1 nonsynonymous","S43Y D90F Q168K",3
"lib1","SARS-CoV-2","CCGAACATATTAGACA",6,156.68,10.08,-0.68,0.04,2.85,1.03,0,"1 nonsynonymous","Q176H",1
"lib1","SARS-CoV-2","CCGAACCCATGGTATT",1,5.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H L125R K198D",3
"lib1","SARS-CoV-2","CCGAACCCCTGGACCT",4,4.18,NA,NA,NA,NA,NA,NA,"stop","V37L K56W A105*",3
"lib1","SARS-CoV-2","CCGAACCTGCAACGAT",3,8.09,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","L95S F160V",2
"lib1","SARS-CoV-2","CCGAACGAAAAGTTCC",2,62.49,6.69,-4.07,0.21,1.93,1.1,0.01,">1 nonsynonymous","N109S Y121S",2
"lib1","SARS-CoV-2","CCGAACGACATACGGC",4,35.23,6,-4.76,2,3,1.18,0,">1 nonsynonymous","P54L C61G G83L A89H D137K G166F K198R",7
"lib1","SARS-CoV-2","CCGAACGATCTTCTTA",2,23,6.05,-4.71,1.24,1.5,1.13,0.04,">1 nonsynonymous","F47R N64Y Y93T P149V Y165S",5
"lib1","SARS-CoV-2","CCGAACGCAGATTACA",6,367.44,7.98,-2.79,0.1,1.51,1.12,0,">1 nonsynonymous","T15V K87N P96C F160K",4
"lib1","SARS-CoV-2","CCGAACGCTTTATCAA",4,19.41,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1D V52F V71S G83S K87C A145I L162Q V182A",8
"lib1","SARS-CoV-2","CCGAACTAAAAGGTAG",1,17.48,6,-4.76,2,3,1.13,0.03,">1 nonsynonymous","C6E Y35S P177T",3
"lib1","SARS-CoV-2","CCGAACTAACCCGGGG",1,5.96,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","P82M P96L T100D L122E G174A T201Y",6
"lib1","SARS-CoV-2","CCGAACTACACGAAAC",7,1.97,NA,NA,NA,NA,NA,NA,"stop","N4* Y35L G83R N92K R127T G196Y",6
"lib1","SARS-CoV-2","CCGAACTATCCCGATT",1,1.9,NA,NA,NA,NA,NA,NA,"stop","L122* K128S Y178M",3
"lib1","SARS-CoV-2","CCGAACTCACCGTTAG",9,53.93,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","L38R W106L D112R Y178R",4
"lib1","SARS-CoV-2","CCGAACTCCGCTGCAG",1,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G Y121S F134V P177S",4
"lib1","SARS-CoV-2","CCGAACTCGAAGGTAA",2,47.42,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y39L K56P L95Q P149M K198N",5
"lib1","SARS-CoV-2","CCGAACTGAACTCATT",6,49.59,9.99,-0.78,0.09,2.15,1.05,0,">1 nonsynonymous","F47T D97F",2
"lib1","SARS-CoV-2","CCGAACTGATACAGGT",3,32.12,6,-4.76,1.44,1.5,1.21,0.05,">1 nonsynonymous","P7S T46Y D75K L95A",4
"lib1","SARS-CoV-2","CCGAACTTAAAACCAA",4,1.82,NA,NA,NA,NA,NA,NA,"stop","N1R P7C R25* Y66S A105W",5
"lib1","SARS-CoV-2","CCGAAGAAAAACGATC",2,78.02,6,-4.76,2,3,1.17,0,">1 nonsynonymous","W23L G51C T100E F126M R136G T148G",6
"lib1","SARS-CoV-2","CCGAAGAAGCCTAACG",2,48.02,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A18E C31T Y159R",3
"lib1","SARS-CoV-2","CCGAAGAAGGAGGACG",3,11.89,6,-4.76,2,3,1.04,0,">1 nonsynonymous","R16G S53N C102F Y121E S129I C158V G172F",7
"lib1","SARS-CoV-2","CCGAAGAATGACTACT",5,23.68,7.31,-3.46,0.25,1.5,1.1,0.03,">1 nonsynonymous","I72M Y123E",2
"lib1","SARS-CoV-2","CCGAAGACAAGCCATC",1,0.83,NA,NA,NA,NA,NA,NA,"stop","F8L N40Y G146* P177V T201D",5
"lib1","SARS-CoV-2","CCGAAGACCTTCTTGC",4,13.29,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","R27L T85M Y93L S113L S200R",5
"lib1","SARS-CoV-2","CCGAAGAGACTTAACC",11,4.53,NA,NA,NA,NA,NA,NA,"stop","F47* F160L V173G T201Y",4
"lib1","SARS-CoV-2","CCGAAGAGGCTACATG",4,100.94,10.15,-0.61,0.09,2.21,1.01,0,">1 nonsynonymous","L5A V37R I80M",3
"lib1","SARS-CoV-2","CCGAAGATATTCTCAA",5,122.14,9.57,-1.19,0.05,2.79,1.08,0,">1 nonsynonymous","G174E Y178S",2
"lib1","SARS-CoV-2","CCGAAGATTGTACTTT",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R G116S P161F V182A",4
"lib1","SARS-CoV-2","CCGAAGCCGAGGCGCG",1,6.5,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41F Y91F A105P V180L",4
"lib1","SARS-CoV-2","CCGAAGCGTATCATTG",13,152.43,8.48,-2.29,0.14,2.09,1.12,0.01,">1 nonsynonymous","D75N G83Y D97S Q168L",4
"lib1","SARS-CoV-2","CCGAAGCTGTAACAAT",4,16.73,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N64Y G101R T140N",3
"lib1","SARS-CoV-2","CCGAAGCTTAATACGT",5,0.18,NA,NA,NA,NA,NA,NA,"stop","F47M N64Q G152S Q163*",4
"lib1","SARS-CoV-2","CCGAAGGTCTGTGGAG",4,22.46,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","A14I K87R Y121F I138S P161K",5
"lib1","SARS-CoV-2","CCGAAGGTGATCAAAC",8,0.03,NA,NA,NA,NA,NA,NA,"stop","S41Y S69* A81Q L125Y F167G",5
"lib1","SARS-CoV-2","CCGAAGGTGCATCTAG",1,12.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F Y143C S184F",3
"lib1","SARS-CoV-2","CCGAAGGTTAATACTT",1,11.51,10.68,-0.09,0.11,2.85,1.07,0.01,"1 nonsynonymous","R78H",1
"lib1","SARS-CoV-2","CCGAAGTACCCTAGGC",2,6.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95T V103M L125M",3
"lib1","SARS-CoV-2","CCGAAGTACTAGACCA",1,16.3,10.51,-0.26,0.11,2.88,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCGAAGTCTAAATCCC",2,8.45,10.78,0.01,0.11,2.79,1.14,0.01,"1 nonsynonymous","K199F",1
"lib1","SARS-CoV-2","CCGAAGTCTTCTATTT",2,18.17,6.11,-4.66,1.11,1.5,1.18,0.03,">1 nonsynonymous","S139D L162A",2
"lib1","SARS-CoV-2","CCGAATAAACTAATTG",4,65.51,8.95,-1.82,0.07,2.76,1.08,0,">1 nonsynonymous","T63V R73N",2
"lib1","SARS-CoV-2","CCGAATAAAGACATAT",1,20.04,9.12,-1.64,0.25,1.61,1.2,0.04,">1 nonsynonymous","S36L I104H",2
"lib1","SARS-CoV-2","CCGAATAAGATGAACC",2,55.33,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F44L Y50S Y119G P177H",4
"lib1","SARS-CoV-2","CCGAATAATGTGTACT",2,110.24,9.73,-1.04,0.11,2.05,1.09,0,">1 nonsynonymous","N40L L57V",2
"lib1","SARS-CoV-2","CCGAATACACCCATTG",4,143.02,10.29,-0.48,0.05,2.82,1.02,0,">1 nonsynonymous","T15L K56L",2
"lib1","SARS-CoV-2","CCGAATACAGTTCTTA",6,51.35,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12T S53H Q84Y N92K Y123N P149S",6
"lib1","SARS-CoV-2","CCGAATATGATAAAGC",1,41.55,10.08,-0.68,0.11,2.78,1.03,0,">1 nonsynonymous","Q84S D90N D98S E141K I142L T201K",6
"lib1","SARS-CoV-2","CCGAATATGGGGATTA",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L I142T",2
"lib1","SARS-CoV-2","CCGAATATTAAGATAA",4,33.54,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A18F I28V W106A L122V Y143Q C150Q",6
"lib1","SARS-CoV-2","CCGAATCACGCATATG",7,84.58,10.44,-0.33,0.03,2.92,1.03,0,">1 nonsynonymous","L5R E76Q S164L",3
"lib1","SARS-CoV-2","CCGAATCGATTCAATT",4,40.59,10.18,-0.58,0.08,2.14,1,0,">1 nonsynonymous","N13T D98R Q168R",3
"lib1","SARS-CoV-2","CCGAATCTAGATAATT",1,16.49,6.98,-3.78,0.32,1.5,1.1,0.04,">1 nonsynonymous","S139V L162M T170E",3
"lib1","SARS-CoV-2","CCGAATCTCTCATGGA",7,74.37,10.1,-0.67,0.09,2.6,1.03,0,">1 nonsynonymous","T63A Y91H D97M",3
"lib1","SARS-CoV-2","CCGAATGACATACGAT",5,106.85,10.49,-0.27,0.04,2.87,1.03,0,">1 nonsynonymous","A42Y L60N",2
"lib1","SARS-CoV-2","CCGAATGACCAATGTC",6,3.44,NA,NA,NA,NA,NA,NA,"stop","N13* K87I T140E",3
"lib1","SARS-CoV-2","CCGAATGAGTGCAATA",6,26.76,6,-4.76,0.94,3,1.13,0,">1 nonsynonymous","Y93K R136P G174M",3
"lib1","SARS-CoV-2","CCGAATGGATAGTAAG",2,32.37,10.14,-0.63,0.16,2.38,1.02,0.01,">1 nonsynonymous","N13A V37T K48L",3
"lib1","SARS-CoV-2","CCGAATGGGTTCTATG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","S19* T55I I104E N120S T201S",5
"lib1","SARS-CoV-2","CCGAATGTAGTGCGGT",4,1.36,NA,NA,NA,NA,NA,NA,"stop","G117V Y123E T201*",3
"lib1","SARS-CoV-2","CCGAATTAACACGTAA",1,55,10.81,0.04,0.08,2.94,1.02,0,">1 nonsynonymous","N120H I138V",2
"lib1","SARS-CoV-2","CCGAATTAGAATTCCG",2,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F W106E E135V C158T",4
"lib1","SARS-CoV-2","CCGAATTATACTCAAA",3,90.58,10.24,-0.53,0.04,2.88,1.01,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","CCGAATTATCAGAGAT",1,14.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50S T85S N120I",3
"lib1","SARS-CoV-2","CCGAATTCAGATAATG",3,12.58,9.86,-0.9,0.11,2.93,1.04,0.01,">1 nonsynonymous","E10T V32K L125S",3
"lib1","SARS-CoV-2","CCGACAAAACCGCACC",1,33.91,6,-4.76,1.53,1.5,1.23,0.01,">1 nonsynonymous","L57T K87N N107L",3
"lib1","SARS-CoV-2","CCGACAAACGGACGAA",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T K56S L95V G101E V153W",5
"lib1","SARS-CoV-2","CCGACAAAGCTAATTT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","V103* S164C",2
"lib1","SARS-CoV-2","CCGACAAATACTTGAG",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T I80S N92V T140L",4
"lib1","SARS-CoV-2","CCGACAAGGCTTGTTT",2,24.18,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G74R A81P",2
"lib1","SARS-CoV-2","CCGACAAGTAGGTGGA",1,11.82,10.03,-0.74,0.09,2.17,1.04,0.01,">1 nonsynonymous","T15F G116S",2
"lib1","SARS-CoV-2","CCGACAATAATTCGAT",4,40.73,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P96Q F167K P191D",3
"lib1","SARS-CoV-2","CCGACAATCCAGTACG",6,64.25,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","Q144G P161W",2
"lib1","SARS-CoV-2","CCGACACAAAAACGTA",5,49.65,10.1,-0.66,0.03,2.87,1.03,0,">1 nonsynonymous","G9Y F44L R78E G83R",4
"lib1","SARS-CoV-2","CCGACACAGCTGGGAA",7,130.18,9.92,-0.84,0.1,1.95,1.09,0,"1 nonsynonymous","G51P",1
"lib1","SARS-CoV-2","CCGACACCTTCCGACC",3,84.74,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F12I A33H K56P Y91D",4
"lib1","SARS-CoV-2","CCGACACGAACAACGT",2,42.76,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N30V A42L I138P G174V",4
"lib1","SARS-CoV-2","CCGACACTTAACACAA",1,17.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","CCGACACTTCCCGACA",9,63.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86P L122I T201G",3
"lib1","SARS-CoV-2","CCGACATTTCGCCCTC",1,27.69,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","D59T I72F E154M Q168W T201L",5
"lib1","SARS-CoV-2","CCGACATTTGAGAAAT",2,38.2,NA,NA,NA,NA,NA,NA,"stop","W23* G83F A89V V115H",4
"lib1","SARS-CoV-2","CCGACCAATAATAAGA",9,1.81,NA,NA,NA,NA,NA,NA,"stop","S41R F44*",2
"lib1","SARS-CoV-2","CCGACCACGCCCACTC",1,54.1,10.79,0.03,0.08,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CCGACCAGGAGTACAC",8,77.62,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V37R N64T Y93S Y143H",4
"lib1","SARS-CoV-2","CCGACCAGTCATATAA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","E10* A89S",2
"lib1","SARS-CoV-2","CCGACCATTTCGATAT",5,97.82,6.35,-4.41,0.4,1.5,1.18,0.01,">1 nonsynonymous","K56V G86W S129G T201N",4
"lib1","SARS-CoV-2","CCGACCCACGTTAATG",2,6.07,9.6,-1.17,0.29,2.31,1.18,0.04,">1 nonsynonymous","K56W G116L S139T",3
"lib1","SARS-CoV-2","CCGACCCCTTTAGCAG",1,2.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","CCGACCCGAGTGAGCA",6,46.56,6,-4.76,1.47,1.5,1.2,0.03,">1 nonsynonymous","A18F K48M L183Y",3
"lib1","SARS-CoV-2","CCGACCCGTAGAAACA",6,42.37,10.65,-0.11,0.08,2.93,1.06,0,"1 nonsynonymous","K132L",1
"lib1","SARS-CoV-2","CCGACGAAAAACGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* K87C K94F T148L",4
"lib1","SARS-CoV-2","CCGACGAACAAACTAA",4,0.66,NA,NA,NA,NA,NA,NA,"stop","T3P N30G F126S S164*",4
"lib1","SARS-CoV-2","CCGACGAACTTTAGAA",1,46.64,10.72,-0.04,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGACGAAGTCGATTG",1,11.69,10.44,-0.33,0.12,2.88,1.01,0,">1 nonsynonymous","I2L G9L A33C",3
"lib1","SARS-CoV-2","CCGACGAATAAGACAT",5,1.11,NA,NA,NA,NA,NA,NA,"stop","N13* R124E Q176A",3
"lib1","SARS-CoV-2","CCGACGAATCAAACCG",3,23.59,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P54T D68K",2
"lib1","SARS-CoV-2","CCGACGACAACCTATT",3,29.23,10.74,-0.02,0.07,2.88,1.06,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","CCGACGACATGGCACT",3,20.32,9.42,-1.34,0.22,1.58,1.11,0.03,">1 nonsynonymous","I2L A33V T63C P96H N130L",5
"lib1","SARS-CoV-2","CCGACGATCGCCAACC",9,92.17,10.81,0.04,0.06,2.91,1.04,0,"1 nonsynonymous","T3I",1
"lib1","SARS-CoV-2","CCGACGCGATAACGCT",6,97.08,10.59,-0.17,0.04,2.94,1,0,"1 nonsynonymous","A89C",1
"lib1","SARS-CoV-2","CCGACGCTACCACGAA",10,33.81,6,-4.76,1.2,1.5,1.15,0.02,">1 nonsynonymous","L57S P82Y V153M",3
"lib1","SARS-CoV-2","CCGACGGAAACACTGG",8,93.88,9.4,-1.37,0.11,2.02,1.14,0,">1 nonsynonymous","L5I A18E G155F",3
"lib1","SARS-CoV-2","CCGACGGCTTACCCGT",14,122.93,10.77,0.01,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGACGTCCTACGAAC",2,38.79,10.86,0.1,0.09,2.91,1.04,0,"1 nonsynonymous","I28F",1
"lib1","SARS-CoV-2","CCGACTAAAACCTGCC",1,63.08,7.85,-2.91,0.44,1.5,1,0.07,">1 nonsynonymous","Y35S K56T G117S Y119C N151M N157G P191T",7
"lib1","SARS-CoV-2","CCGACTAACGTCAATG",5,33.85,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N1V Y66A D90H I104F A145K P149S P177R S200Q",8
"lib1","SARS-CoV-2","CCGACTAATGACAAAT",2,0.93,NA,NA,NA,NA,NA,NA,"stop","F47T K56R I88R L95T F167*",5
"lib1","SARS-CoV-2","CCGACTAATTTTTAGA",8,58.15,8.19,-2.58,0.11,2.16,1.04,0.01,">1 nonsynonymous","D34S G116F F156G",3
"lib1","SARS-CoV-2","CCGACTACAAGGATAA",6,94.9,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I2S L60M I88P F99T Y178T",5
"lib1","SARS-CoV-2","CCGACTACAATGATAC",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N A67I D98W F156L",4
"lib1","SARS-CoV-2","CCGACTACGTAACAAT",13,984.38,9.82,-0.95,0.04,2.73,1.03,0,">1 nonsynonymous","L5R Y121S",2
"lib1","SARS-CoV-2","CCGACTAGTCATATTT",8,1.39,NA,NA,NA,NA,NA,NA,"stop","F12K Y39*",2
"lib1","SARS-CoV-2","CCGACTATAATCTTCC",2,18.88,10.52,-0.24,0.03,2.89,1.03,0,">1 nonsynonymous","Q84R D97G",2
"lib1","SARS-CoV-2","CCGACTCAAACCTCAC",4,54.72,10.24,-0.52,0.1,2.71,1.05,0,">1 nonsynonymous","S41C G51S C61N C195F T201H",5
"lib1","SARS-CoV-2","CCGACTCATATACTAT",6,43.44,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90I Y119L Y178P",3
"lib1","SARS-CoV-2","CCGACTCATATTAGTC",6,22.33,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A33P N92I A145L V173F",4
"lib1","SARS-CoV-2","CCGACTGAACCAACAC",2,37.54,7.65,-3.11,0.34,1.5,1.03,0.05,">1 nonsynonymous","I28S Y66E R124S S147P",4
"lib1","SARS-CoV-2","CCGACTGATACTTCTC",12,133.14,6.74,-4.02,0.27,1.5,1.16,0.01,">1 nonsynonymous","T55S C61A E141L Y165N",4
"lib1","SARS-CoV-2","CCGACTGCAACTCCAC",4,38.43,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","L95C Y121R Y165R R179C K199E",5
"lib1","SARS-CoV-2","CCGACTGCAACTGACG",1,79.17,10.76,-0.01,0.04,2.93,1.02,0,">1 nonsynonymous","Q84T D98H",2
"lib1","SARS-CoV-2","CCGACTGGCTTTAAAA",2,3.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180K",1
"lib1","SARS-CoV-2","CCGACTGTACATCGTA",10,104.46,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S29E Y35M D68K D90N V181E",5
"lib1","SARS-CoV-2","CCGACTTAGGACGGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","T100* E141G P149S G166S",4
"lib1","SARS-CoV-2","CCGACTTGATGATACC",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R F12I L95P Y119L S139L V173H Y178H L183F",8
"lib1","SARS-CoV-2","CCGACTTGATGTCAAC",7,64.81,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y35P F70P D90Q R127F P149L",5
"lib1","SARS-CoV-2","CCGAGAAAAATGACAA",3,56.88,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N92A E141R Y175N",3
"lib1","SARS-CoV-2","CCGAGAAAACACTATA",3,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y V71M G83N R127N S184Q",5
"lib1","SARS-CoV-2","CCGAGAACTAAACTGC",6,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M D112L",2
"lib1","SARS-CoV-2","CCGAGAATGATAGAAG",9,2.36,NA,NA,NA,NA,NA,NA,"stop","Y35I P96S I104* V173E",4
"lib1","SARS-CoV-2","CCGAGACAGAGGCGAA",1,29.99,10.98,0.21,0.14,2.9,1.02,0.01,"1 nonsynonymous","S200L",1
"lib1","SARS-CoV-2","CCGAGACAGTTCAACC",2,21.16,8.58,-2.19,0.1,2.84,1.05,0.01,">1 nonsynonymous","A42L C61K K87T N109E K132S",5
"lib1","SARS-CoV-2","CCGAGACATAAACAAT",3,20.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N24A P82K A105L",3
"lib1","SARS-CoV-2","CCGAGACATTTAATTG",5,45.75,7.4,-3.36,0.19,1.5,1.18,0.01,">1 nonsynonymous","A42V D112S",2
"lib1","SARS-CoV-2","CCGAGACCTGCCTGTA",4,33.41,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99R N157L",2
"lib1","SARS-CoV-2","CCGAGACGTGAAAACG",8,62.4,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","D90N W106E Y123H G146P",4
"lib1","SARS-CoV-2","CCGAGACTCCCACAAT",2,0.49,NA,NA,NA,NA,NA,NA,"stop","D75S T148E Y178*",3
"lib1","SARS-CoV-2","CCGAGACTCCCTAGTC",2,45.71,10.34,-0.42,0.08,2.82,1.01,0,">1 nonsynonymous","N1Y Q84I",2
"lib1","SARS-CoV-2","CCGAGAGATCGAGAAG",4,105.48,10.4,-0.37,0.04,2.89,1.05,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","CCGAGAGCAATAAAGA",2,37.04,7.99,-2.77,0.19,2.21,1.21,0.01,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","CCGAGAGTTTAGTAGA",3,1.97,NA,NA,NA,NA,NA,NA,"stop","K132L I138*",2
"lib1","SARS-CoV-2","CCGAGATAGCGCACCA",1,118.93,10.06,-0.71,0.06,2.85,1.05,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","CCGAGATATAGCCCTG",9,1.37,NA,NA,NA,NA,NA,NA,"stop","G9H S19*",2
"lib1","SARS-CoV-2","CCGAGATGGTCACAAT",8,64.07,8.41,-2.35,0.13,1.58,1.09,0.01,">1 nonsynonymous","W106C Y119R",2
"lib1","SARS-CoV-2","CCGAGATTCAGAAATA",3,88.39,10.72,-0.04,0.08,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGAGATTGTCTAACA",3,56.47,6,-4.76,1.32,1.5,1.13,0.01,">1 nonsynonymous","K26E A67Y G83V",3
"lib1","SARS-CoV-2","CCGAGATTTCAAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y123L",2
"lib1","SARS-CoV-2","CCGAGCACTTAGACTT",2,58.73,10.01,-0.75,0.09,2.66,1.03,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","CCGAGCCATAACCACC",2,14.69,8.91,-1.85,0.33,1.5,1.05,0.06,">1 nonsynonymous","D98K W106R F134H",3
"lib1","SARS-CoV-2","CCGAGCCCCGCTTCCT",12,271.42,9.82,-0.94,0.09,2.16,1.04,0,">1 nonsynonymous","L95V V173S T193A",3
"lib1","SARS-CoV-2","CCGAGCCCTAACTCCA",2,26.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3L V37H I104N I138L",4
"lib1","SARS-CoV-2","CCGAGCGAGGGGGAGC",2,18.3,6.32,-4.45,0.77,1.5,1.18,0.04,">1 nonsynonymous","A33C L60P L162A",3
"lib1","SARS-CoV-2","CCGAGCTAAGGATGGA",8,171.29,10.7,-0.07,0.03,2.91,1.06,0,"1 nonsynonymous","H189C",1
"lib1","SARS-CoV-2","CCGAGCTACGACCGAG",1,0.06,NA,NA,NA,NA,NA,NA,"stop","S36* E76N P82S N107E G166P N171K",6
"lib1","SARS-CoV-2","CCGAGCTTCTAAGACG",10,133.94,10.56,-0.2,0.06,2.86,1.08,0,">1 nonsynonymous","S53W Y123K V153L",3
"lib1","SARS-CoV-2","CCGAGGAAAGTGTTAG",3,29.48,6,-4.76,1.37,3,1.27,0.01,">1 nonsynonymous","L5C I88F S139Y",3
"lib1","SARS-CoV-2","CCGAGGAATCCACGTT",8,5.07,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3Q S41K D98Y V103K S200Y",5
"lib1","SARS-CoV-2","CCGAGGACTCATACCA",5,51.78,8.77,-1.99,0.12,2.6,1.12,0.01,">1 nonsynonymous","A33H N118K",2
"lib1","SARS-CoV-2","CCGAGGATGCACTATG",6,368,10.64,-0.12,0.03,2.93,1.04,0,"1 nonsynonymous","T63V",1
"lib1","SARS-CoV-2","CCGAGGCTAACTAAAT",2,18.92,10.76,0,0.12,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCGAGGGAACATCATA",3,30.66,10.96,0.19,0.08,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGAGTCAATAACGCT",2,13.49,8.33,-2.43,0.36,1.5,1.18,0.07,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","CCGAGTCTACATTTCT",3,22.27,6.54,-4.22,0.59,1.5,1.18,0.05,">1 nonsynonymous","F8D V32L F70L A81I P133A",5
"lib1","SARS-CoV-2","CCGAGTGAAAATTGAA",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N N171S K199Y",3
"lib1","SARS-CoV-2","CCGAGTTTCATCACAA",2,16.24,8.9,-1.86,0.23,2.35,1.08,0.02,">1 nonsynonymous","A14S K56L K87D E141T",4
"lib1","SARS-CoV-2","CCGATAAAAAAATTGC",2,33.22,9.58,-1.18,0.17,2.45,1.11,0.01,">1 nonsynonymous","D34P S36Y",2
"lib1","SARS-CoV-2","CCGATAAAAAGAATGT",7,56.31,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T100D A105D",2
"lib1","SARS-CoV-2","CCGATAACGCCAATTT",1,12.96,6.14,-4.63,1.25,1.5,1.33,0.06,">1 nonsynonymous","A14S S43M T55N G74V",4
"lib1","SARS-CoV-2","CCGATAAGCCATCACA",2,22.29,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14D N118C F126C G146A",4
"lib1","SARS-CoV-2","CCGATAAGGCACAATG",4,24.23,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","Y39C V103L P161A Y178P",4
"lib1","SARS-CoV-2","CCGATAAGGCGCACAG",2,21.9,6,-4.76,0.96,1.5,1.16,0.01,">1 nonsynonymous","T3A Y35R A89V K114L",4
"lib1","SARS-CoV-2","CCGATAAGTCATACGC",1,103.35,10.64,-0.13,0.04,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGATAATTATCACCA",7,331.6,9.36,-1.41,0.06,2.71,1.09,0,">1 nonsynonymous","L5A A33R S41C K87S",4
"lib1","SARS-CoV-2","CCGATACAATGGGTAC",12,1.73,NA,NA,NA,NA,NA,NA,"stop","S113I Y119* G166L",3
"lib1","SARS-CoV-2","CCGATACAATTCATTC",7,145.61,9.86,-0.9,0.06,2.72,1.06,0,">1 nonsynonymous","S36N N107P V173F",3
"lib1","SARS-CoV-2","CCGATACAGTAATTGT",6,40.27,8.37,-2.39,0.29,1.5,1.16,0.03,"1 nonsynonymous","Y50A",1
"lib1","SARS-CoV-2","CCGATACCACAGTAAA",5,60.09,10.4,-0.36,0.05,2.9,1.02,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","CCGATACCCAAAAAAA",5,14.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F47S S69R G86K Q168L",4
"lib1","SARS-CoV-2","CCGATACTCTAGTGAA",12,68.13,6,-4.76,0.39,1.5,1.1,0,">1 nonsynonymous","A89G G101L N107L Y143E F156W",5
"lib1","SARS-CoV-2","CCGATACTGACCCCTT",6,114.55,6,-4.76,1.17,1.5,1.16,0.01,">1 nonsynonymous","S19T N120L K132P",3
"lib1","SARS-CoV-2","CCGATACTTTACTTGT",1,13.89,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N30I L95M K128Y Y165H",4
"lib1","SARS-CoV-2","CCGATAGAACGGAGCG",1,42.03,10.29,-0.47,0.11,2.74,1.07,0,">1 nonsynonymous","V65M Y91K D98N",3
"lib1","SARS-CoV-2","CCGATAGAACTTTCAG",3,81.78,10.79,0.03,0.06,2.93,1.05,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","CCGATAGAATAAAGAA",9,76.17,7.53,-3.23,0.39,1.5,1.11,0.04,">1 nonsynonymous","G9R V20M",2
"lib1","SARS-CoV-2","CCGATAGGAAAGAAAA",1,46.36,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20T T55D G101S I142N",4
"lib1","SARS-CoV-2","CCGATAGTCGAACGTG",3,14.62,6,-4.76,0.77,2.23,1.1,0,">1 nonsynonymous","F12L I88E G101F G116T I138G",5
"lib1","SARS-CoV-2","CCGATATATAACAATC",17,425.48,8.6,-2.17,0.1,2.56,1.1,0,">1 nonsynonymous","T3W S36I F126K K198S",4
"lib1","SARS-CoV-2","CCGATATCCTGGTTAA",3,14.61,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F47N N58I D97I D112E Q144C",5
"lib1","SARS-CoV-2","CCGATATCGCATAACA",3,60.72,9.91,-0.85,0.1,2.07,1.02,0,">1 nonsynonymous","S45L N64L",2
"lib1","SARS-CoV-2","CCGATATCGCCTTTCT",1,28.92,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y39T C49R Y66P A89V P96L",5
"lib1","SARS-CoV-2","CCGATATGCCTTCATC",3,74.29,10.09,-0.67,0.08,2.76,1.03,0,">1 nonsynonymous","E141R G155W",2
"lib1","SARS-CoV-2","CCGATCACAGTTCCTG",7,57.31,8.68,-2.08,0.19,1.5,1.15,0.01,">1 nonsynonymous","G86H K114W",2
"lib1","SARS-CoV-2","CCGATCACCTACATCG",10,192.38,9.57,-1.2,0.08,2.56,1.04,0,">1 nonsynonymous","Y66S K114Q Q144T N171S S184N P197Y",6
"lib1","SARS-CoV-2","CCGATCATGAGCTGCT",1,53.78,9.76,-1.01,0.05,2.81,1.07,0,">1 nonsynonymous","S53A N120S F126I T201L",4
"lib1","SARS-CoV-2","CCGATCATTGAATTGA",5,51.33,10.98,0.22,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGATCCATAACTGAC",8,34.42,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A18L A33C P82L G152N S184I",5
"lib1","SARS-CoV-2","CCGATCCCGTATTCCA",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L C31T D68V F99G Y178F",5
"lib1","SARS-CoV-2","CCGATCCGCAATTAGT",3,65.06,9.73,-1.03,0.07,2.86,1.01,0,">1 nonsynonymous","S41A L122S G155P A190E",4
"lib1","SARS-CoV-2","CCGATCGAGATAACCA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","A22* C31E G86* F126D G196E",5
"lib1","SARS-CoV-2","CCGATCGATTACATAA",10,58.52,8.54,-2.23,0.27,1.5,1,0.03,">1 nonsynonymous","C61D D98T V103T E141S",4
"lib1","SARS-CoV-2","CCGATCTAACAACAAT",6,34.76,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V20M K48L F134T S147T",4
"lib1","SARS-CoV-2","CCGATCTAATATTCCA",2,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P E76I K87F L95T W106C",5
"lib1","SARS-CoV-2","CCGATCTCCTTCAAAA",3,28.51,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","P96K P133R",2
"lib1","SARS-CoV-2","CCGATCTTCAACATAG",3,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","CCGATGAACGAACAGC",5,45.34,10.48,-0.28,0.03,2.88,1.07,0,">1 nonsynonymous","N30R C61S",2
"lib1","SARS-CoV-2","CCGATGAACTAAGGCT",12,63.18,6.13,-4.63,0.8,1.5,1.22,0.02,">1 nonsynonymous","D97N V181S",2
"lib1","SARS-CoV-2","CCGATGAACTTCATTT",14,0.5,NA,NA,NA,NA,NA,NA,"stop","G9R T15D S113T N157* K198N",5
"lib1","SARS-CoV-2","CCGATGAAGAAAAGCC",1,25.97,6,-4.76,1.92,1.5,1.22,0.04,">1 nonsynonymous","R27M Y35S Y66W P96K S129G I142N P161D",7
"lib1","SARS-CoV-2","CCGATGACAAATCTAA",5,94.34,8.15,-2.62,0.11,2.26,1.11,0,"1 nonsynonymous","G172S",1
"lib1","SARS-CoV-2","CCGATGACGTATCAAA",3,0.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132M",1
"lib1","SARS-CoV-2","CCGATGAGCAGGTCGA",2,35.65,10.25,-0.51,0.09,2.84,1,0.01,">1 nonsynonymous","I28F F44N K198N",3
"lib1","SARS-CoV-2","CCGATGAGGCCCCATG",2,7.82,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","L60P G86S C158V",3
"lib1","SARS-CoV-2","CCGATGAGTCTTGGAT",5,31,9.23,-1.53,0.22,1.5,1.03,0.02,">1 nonsynonymous","S41K P133N E141V",3
"lib1","SARS-CoV-2","CCGATGATAGACTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146M G166C",2
"lib1","SARS-CoV-2","CCGATGCAACCTTAGT",10,239.99,7.15,-3.61,0.12,1.88,1.11,0,"1 nonsynonymous","Y159R",1
"lib1","SARS-CoV-2","CCGATGCCTACTGAAA",10,248.22,10.53,-0.23,0.03,2.9,1.04,0,">1 nonsynonymous","Y91L N120D",2
"lib1","SARS-CoV-2","CCGATGCGAGTGCAAT",3,31.94,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","D68V I88R D112Q Y175A",4
"lib1","SARS-CoV-2","CCGATGCTATGAGGAA",2,122.73,10.81,0.04,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGATGCTCGAAAAAT",5,17.44,10.58,-0.18,0.07,2.87,1.08,0,"1 nonsynonymous","S139H",1
"lib1","SARS-CoV-2","CCGATGGGTTATAAAA",4,10.73,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G86T G101N N171F",3
"lib1","SARS-CoV-2","CCGATGTACATAACCT",10,91.07,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N120L Q144H V153Y R179Q",4
"lib1","SARS-CoV-2","CCGATGTTAAAGTCGG",5,66.09,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G86Y I138A Y159L",3
"lib1","SARS-CoV-2","CCGATGTTGTGGCCCG",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G N64R P133I",3
"lib1","SARS-CoV-2","CCGATTAAAACCCACC",1,20.17,10.91,0.15,0.18,2.79,1.07,0.01,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","CCGATTAACTTAAATT",7,86.54,10.81,0.04,0.09,2.87,1.09,0,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","CCGATTACTGTCCTTA",4,72.15,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R16G S108L P149M V173H",4
"lib1","SARS-CoV-2","CCGATTAGACATCAAC",3,53.68,6.29,-4.47,0.86,1.5,1.16,0.04,">1 nonsynonymous","N30K S36M A81F K94F S129G Y159C T201K",7
"lib1","SARS-CoV-2","CCGATTATACATTTGC",1,9.18,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D98Y T100A C158Y",3
"lib1","SARS-CoV-2","CCGATTATAGTAATAA",3,1,NA,NA,NA,NA,NA,NA,"stop","P7* V52H L60* C102N R127N G152V",6
"lib1","SARS-CoV-2","CCGATTATATCCTTCC",5,55.32,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C6L N107W K128D P149A H189I",5
"lib1","SARS-CoV-2","CCGATTCACAAATCAA",9,148.16,10.54,-0.22,0.04,2.86,1.08,0,">1 nonsynonymous","P149S V173G",2
"lib1","SARS-CoV-2","CCGATTCTAAAAATAT",1,24.44,10.85,0.09,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGATTCTTTATTACT",1,47.12,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12S C61T G86V A190L",4
"lib1","SARS-CoV-2","CCGATTGGGCAATCTA",2,20.92,9.49,-1.27,0.27,1.85,1.08,0.03,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CCGATTTAAATGAACA",2,69.52,6,-4.76,2,3,1.21,0,">1 nonsynonymous","Y39M I88D I104R E135W",4
"lib1","SARS-CoV-2","CCGATTTAAATGGATG",5,95.6,10.85,0.09,0.08,2.92,1.05,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","CCGATTTACATTAAGG",1,7.69,6.32,-4.45,2,1.5,1.19,0.04,">1 nonsynonymous","Y35H N40Y C158V V173N",4
"lib1","SARS-CoV-2","CCGATTTAGATCCATA",1,40.1,10.82,0.06,0.15,2.53,1.05,0.01,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","CCGATTTATATAACAA",5,77.51,10.75,-0.02,0.04,2.94,1,0,"1 nonsynonymous","T140F",1
"lib1","SARS-CoV-2","CCGATTTGACGCGATC",4,64.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I S45V G174I",3
"lib1","SARS-CoV-2","CCGATTTGTGCGATCA",7,1.39,NA,NA,NA,NA,NA,NA,"stop","D59V A89T G117F R179*",4
"lib1","SARS-CoV-2","CCGATTTTATAAAGAT",2,63.01,10.78,0.02,0.05,2.88,1.07,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","CCGATTTTCCCGGTAC",10,32.4,8.46,-2.31,0.38,1.5,1,0.07,">1 nonsynonymous","A42Y V71E A81C",3
"lib1","SARS-CoV-2","CCGATTTTGCAGTGCC",1,21.63,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y35R A105V N118V P177D",4
"lib1","SARS-CoV-2","CCGATTTTTCTGGCTG",2,9.37,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N58Y I88V R124W",3
"lib1","SARS-CoV-2","CCGATTTTTTCTACTG",7,16.8,6.88,-3.88,0.4,1.5,1.4,0.04,"1 nonsynonymous","I104K",1
"lib1","SARS-CoV-2","CCGCAAAACATTCCAT",1,14.51,7.39,-3.37,0.43,1.5,1.09,0.04,">1 nonsynonymous","T63K L122G Q144P Q176A",4
"lib1","SARS-CoV-2","CCGCAAATACTGGATT",6,52.52,6.31,-4.45,0.49,1.5,1.1,0.01,">1 nonsynonymous","A67H A89D K114I",3
"lib1","SARS-CoV-2","CCGCAAATTTTACCAT",4,73.12,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F44S P82E L131C T140N P161V",5
"lib1","SARS-CoV-2","CCGCAACACTCACTCG",7,58.22,10.65,-0.11,0.05,2.81,1.05,0,"1 nonsynonymous","D59M",1
"lib1","SARS-CoV-2","CCGCAACATATTGCGC",7,49.16,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G51P G101Q K128S",3
"lib1","SARS-CoV-2","CCGCAACGACCAGCAG",4,27.48,6.14,-4.62,1.48,1.5,1.3,0.06,">1 nonsynonymous","R25A N64R V65F T85E S113R",5
"lib1","SARS-CoV-2","CCGCAACTCCCAACAA",2,78.81,8.28,-2.48,0.16,1.89,1.1,0.01,">1 nonsynonymous","K48R I104L Y165S T201S",4
"lib1","SARS-CoV-2","CCGCAACTGCTTCGAC",4,58.8,10.59,-0.17,0.07,2.92,1,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","CCGCAAGAACATTATG",1,10.94,7.41,-3.35,0.38,1.5,1.03,0.04,">1 nonsynonymous","P82I L111S",2
"lib1","SARS-CoV-2","CCGCAAGCTAAACTAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","CCGCAAGCTATTCATT",12,109.17,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y119L S139H Y165S",3
"lib1","SARS-CoV-2","CCGCAAGCTTGGAGAC",1,35.36,10.51,-0.25,0.11,2.75,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCAAGGTTAGTCAA",6,7.02,10.2,-0.57,0.22,2.09,1,0.01,">1 nonsynonymous","S41V S139L",2
"lib1","SARS-CoV-2","CCGCAATAAAATCGAA",9,144.92,9.95,-0.81,0.07,2.66,1.02,0,">1 nonsynonymous","C6L V77L",2
"lib1","SARS-CoV-2","CCGCAATAAAGGACAC",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K I88A Y121T G172V",4
"lib1","SARS-CoV-2","CCGCAATAATATTTCC",2,41.29,6.34,-4.42,0.52,1.5,1.16,0.02,">1 nonsynonymous","W106F F167L",2
"lib1","SARS-CoV-2","CCGCAATATCGTGAAT",4,63.72,10.71,-0.05,0.05,2.94,1,0,">1 nonsynonymous","G83N I88V",2
"lib1","SARS-CoV-2","CCGCAATCAGGAGATA",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","CCGCAATGATATTCAG",14,2.34,NA,NA,NA,NA,NA,NA,"stop","F47N C158*",2
"lib1","SARS-CoV-2","CCGCAATGATCTAGAT",4,41.11,6,-4.76,1.46,1.5,1.14,0.01,">1 nonsynonymous","F12Q C61T T100G N107M K114N V115P R127L G146L G174K",9
"lib1","SARS-CoV-2","CCGCAATTAGTTATAT",5,137.28,10.52,-0.25,0.03,2.88,1.04,0,">1 nonsynonymous","C61R D98M",2
"lib1","SARS-CoV-2","CCGCACAAAATCTGAA",2,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L V153K P161L F167E",4
"lib1","SARS-CoV-2","CCGCACAAGCAACACT",14,155.37,10.16,-0.6,0.05,2.8,1.02,0,">1 nonsynonymous","L38F S129V Q144R K198C",4
"lib1","SARS-CoV-2","CCGCACAATGAGTCTC",4,14.06,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14V A22R I88N P96D Q144A T201V",6
"lib1","SARS-CoV-2","CCGCACAATTACATGC",1,9.98,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6I S41L F62I I104V S113D G155P",6
"lib1","SARS-CoV-2","CCGCACATAATTAACC",5,68.89,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","S45H C49L A89F L125M N151K",5
"lib1","SARS-CoV-2","CCGCACCAACGTGTAC",2,29.77,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","K94T G152V T170L",3
"lib1","SARS-CoV-2","CCGCACCACGCTCCCG",3,2.87,NA,NA,NA,NA,NA,NA,"stop","R27* K56T G74M",3
"lib1","SARS-CoV-2","CCGCACCATTATCTGC",6,46.39,9.89,-0.87,0.14,1.75,1.03,0.01,"1 nonsynonymous","R127Q",1
"lib1","SARS-CoV-2","CCGCACCGATTTCGGC",3,13.66,8.59,-2.17,0.35,1.5,1.06,0.06,">1 nonsynonymous","R25F T85H",2
"lib1","SARS-CoV-2","CCGCACCTCGCAAGCT",3,86.02,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y121F Q163D N171K",3
"lib1","SARS-CoV-2","CCGCACCTGCCTTGCC",3,2.29,NA,NA,NA,NA,NA,NA,"stop","S36L F62* F99* Q168R P177K P197Y",6
"lib1","SARS-CoV-2","CCGCACCTGTATTATA",9,112.38,10.56,-0.2,0.04,2.89,1.06,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","CCGCACGAGTCCTTCC",9,96.14,10.35,-0.42,0.06,2.85,1.05,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","CCGCACGTATACCGAG",6,10.17,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","P177H",1
"lib1","SARS-CoV-2","CCGCACGTCAACAAAT",6,77.96,10.54,-0.23,0.04,2.91,1.01,0,">1 nonsynonymous","A81R D97L",2
"lib1","SARS-CoV-2","CCGCACTAACTCCAAT",4,3.03,NA,NA,NA,NA,NA,NA,"stop","N13* L38Y V115H",3
"lib1","SARS-CoV-2","CCGCACTACACCGAAA",1,6.23,10.83,0.06,0.14,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCACTATCCAATTC",1,14.03,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R25P A67S P161S P197S",4
"lib1","SARS-CoV-2","CCGCACTTGCATACTA",1,41.06,9.75,-1.02,0.11,2.49,1.04,0,">1 nonsynonymous","F47C I138A P149Q",3
"lib1","SARS-CoV-2","CCGCAGAAGCTAAATT",8,109.7,10.26,-0.51,0.07,2.79,1.04,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","CCGCAGACCCCTGCCT",6,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A N118L P149R",3
"lib1","SARS-CoV-2","CCGCAGACGGTGCTAT",2,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76Y P96T F167D",3
"lib1","SARS-CoV-2","CCGCAGACTACCTTCC",1,20.95,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","V52S P82L V103M",3
"lib1","SARS-CoV-2","CCGCAGCACGACTCTC",7,97.29,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5F V32E S41R L95G T170S H189Y",6
"lib1","SARS-CoV-2","CCGCAGCCAATATTTT",2,85.63,10.82,0.05,0.07,2.89,1.06,0,">1 nonsynonymous","D97M T201L",2
"lib1","SARS-CoV-2","CCGCAGCGAAAATAAA",2,16.38,6.83,-3.94,0.7,1.5,1.15,0.06,">1 nonsynonymous","C6M G86L F134P",3
"lib1","SARS-CoV-2","CCGCAGCGAGAACTAC",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132A F160V",2
"lib1","SARS-CoV-2","CCGCAGCGGTGGCAGC",3,43.35,10.76,0,0.04,2.86,1.08,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","CCGCAGCTAGCTTAGC",5,17.88,6.81,-3.95,0.54,1.5,1.22,0.04,"1 nonsynonymous","L183R",1
"lib1","SARS-CoV-2","CCGCAGGAATCCTACA",2,19.53,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C102N G146V P197E",3
"lib1","SARS-CoV-2","CCGCAGGTAACCCGAA",2,18.1,9.32,-1.44,0.2,2.04,1.1,0.03,">1 nonsynonymous","C31A T46N V173A",3
"lib1","SARS-CoV-2","CCGCATAAAAAAAGAT",1,69.78,6,-4.76,1.48,1.5,1.2,0.03,">1 nonsynonymous","C61R N109S Q176D",3
"lib1","SARS-CoV-2","CCGCATAATAAACACA",3,56.63,9.9,-0.87,0.11,2.27,1.08,0,">1 nonsynonymous","G51F I138M",2
"lib1","SARS-CoV-2","CCGCATACACCCAATA",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S V20L N30S",3
"lib1","SARS-CoV-2","CCGCATACCTCGCGTG",9,65.85,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y91W F99D N110K V173T C195S",5
"lib1","SARS-CoV-2","CCGCATATAAAACACA",5,59.82,10.72,-0.04,0.05,2.89,1.03,0,"1 nonsynonymous","Y39H",1
"lib1","SARS-CoV-2","CCGCATATGCTAAAAG",2,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A F99C N118K E141Y",4
"lib1","SARS-CoV-2","CCGCATCCCACGATGT",2,32.55,10.89,0.12,0.13,2.89,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCGCATCCCTATTGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib1","SARS-CoV-2","CCGCATCCTATCAGCT",7,54.72,8.91,-1.85,0.15,1.64,1.11,0.01,">1 nonsynonymous","F62M E154R L162C A190D",4
"lib1","SARS-CoV-2","CCGCATGAATATGAAT",4,50.78,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","W106Y D137P G152L",3
"lib1","SARS-CoV-2","CCGCATGATTGAACTT",5,39.85,9.78,-0.98,0.09,2.09,1.17,0,">1 nonsynonymous","G83W Y91M",2
"lib1","SARS-CoV-2","CCGCATGGAGATTAAG",2,42.1,10.01,-0.76,0.09,2.86,1.05,0,">1 nonsynonymous","S45C N151M",2
"lib1","SARS-CoV-2","CCGCATTAATACAAAC",9,35.56,6,-4.76,2,3,1.23,0.01,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","CCGCATTACTCATCCC",3,30.82,6.56,-4.2,0.61,1.5,1.12,0.04,">1 nonsynonymous","G9S L95G",2
"lib1","SARS-CoV-2","CCGCATTCCATACATC",2,0.67,NA,NA,NA,NA,NA,NA,"stop","T85F Y91Q R127G G166*",4
"lib1","SARS-CoV-2","CCGCCAAAACCATAAC",5,27.1,10.35,-0.41,0.06,2.77,1.08,0,">1 nonsynonymous","T46F T100S",2
"lib1","SARS-CoV-2","CCGCCAAAGGTGGTTA",10,174.53,10.54,-0.22,0.04,2.86,1.06,0,">1 nonsynonymous","R16L F156W",2
"lib1","SARS-CoV-2","CCGCCAATTTTGCAAT",10,100.59,6,-4.76,1.67,1.5,1.21,0.01,">1 nonsynonymous","E10I L95P",2
"lib1","SARS-CoV-2","CCGCCACAACCTGTAT",2,2.09,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","CCGCCACCCGTAATTC",9,59.1,6,-4.76,2,3,1.16,0,"1 nonsynonymous","F99G",1
"lib1","SARS-CoV-2","CCGCCACTGGAGTCAA",3,34.65,10.58,-0.18,0.05,2.88,1.09,0,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","CCGCCAGCTATCTTCA",2,20.85,10.92,0.15,0.1,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCCAGTTGAGTGCG",15,132.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y P82G N151R",3
"lib1","SARS-CoV-2","CCGCCCAATATCTACT",5,58.94,9.99,-0.77,0.1,2.14,1.06,0,">1 nonsynonymous","A33L Y91G P197S",3
"lib1","SARS-CoV-2","CCGCCCACATAATGCG",4,129.7,9.87,-0.9,0.09,2.27,1.02,0,">1 nonsynonymous","G9F G83V",2
"lib1","SARS-CoV-2","CCGCCCACCCACGTTT",2,0.99,NA,NA,NA,NA,NA,NA,"stop","P82T L95P I104K E141C V153Q F156* L162D",7
"lib1","SARS-CoV-2","CCGCCCAGTCACAGGC",2,5.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CCGCCCATAACAGTTC",4,20.13,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","G51L N107R K114F",3
"lib1","SARS-CoV-2","CCGCCCATTAGTATTC",1,20.7,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","W23V C61N Y119C",3
"lib1","SARS-CoV-2","CCGCCCCATAAATCAA",7,189.83,10.7,-0.07,0.04,2.92,1.06,0,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","CCGCCCCCCAGCAGTA",5,52.14,9.41,-1.35,0.15,1.98,1.1,0.01,">1 nonsynonymous","T15Q N107R",2
"lib1","SARS-CoV-2","CCGCCCTGAAATCACT",4,65.78,10.18,-0.58,0.07,2.83,1.02,0,">1 nonsynonymous","E135R K199I",2
"lib1","SARS-CoV-2","CCGCCGACATGATCAT",1,53.84,7.38,-3.39,0.3,1.58,1.18,0.02,">1 nonsynonymous","S113F L125H",2
"lib1","SARS-CoV-2","CCGCCGACTAGGCCAT",11,300.09,10.76,0,0.06,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CCGCCGGTCGTGCCAT",2,15.69,10.7,-0.07,0.08,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCCTAACAACGCCT",1,19.99,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S43R I80M I104R E186R",4
"lib1","SARS-CoV-2","CCGCCTAGGAAATCCA",4,10.46,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","W23G L57P D97L I138K C158F T201S",6
"lib1","SARS-CoV-2","CCGCCTCCAATAGTAG",2,125.12,8.85,-1.91,0.11,2.58,1.07,0,">1 nonsynonymous","Y35V A81V D97L Y119Q A190P",5
"lib1","SARS-CoV-2","CCGCCTCCCCAATAAC",11,237.44,9.38,-1.38,0.07,2.8,1.11,0,"1 nonsynonymous","G146E",1
"lib1","SARS-CoV-2","CCGCCTGGATATGTAA",2,70.96,10.76,0,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCCTGGCTTTTATT",6,45.6,6.22,-4.55,0.72,1.5,1.19,0.02,">1 nonsynonymous","D68E P82K P197K",3
"lib1","SARS-CoV-2","CCGCCTTACACAGACA",1,35.65,10.56,-0.21,0.08,2.88,1.07,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","CCGCCTTCAACCATAA",2,1.11,NA,NA,NA,NA,NA,NA,"stop","C31Q N107H K128*",3
"lib1","SARS-CoV-2","CCGCCTTGTTTGAAAA",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K Y50L R124H V180K",4
"lib1","SARS-CoV-2","CCGCGAAAATGTTTTA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V K114T",2
"lib1","SARS-CoV-2","CCGCGAACAAGGTCAA",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C G101A E141D P149C",4
"lib1","SARS-CoV-2","CCGCGAAGCCGATTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6G V65* A81V D112N P161Y T201K",6
"lib1","SARS-CoV-2","CCGCGAAGCCGTGAGG",2,34.64,10.62,-0.15,0.06,2.88,1.02,0,">1 nonsynonymous","S129V Q163W",2
"lib1","SARS-CoV-2","CCGCGACACAATAGTA",3,29.63,10.22,-0.55,0.07,2.99,1.02,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","CCGCGACATCTATAAC",9,184.06,9.75,-1.01,0.1,2.53,1.05,0,">1 nonsynonymous","R27S N107K",2
"lib1","SARS-CoV-2","CCGCGACGACCAATCC",3,91.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39N D68I F167V K198T T201R",5
"lib1","SARS-CoV-2","CCGCGAGCACCCAATA",3,49.21,8.5,-2.26,0.27,1.5,1,0.02,">1 nonsynonymous","F47M R127A S164L",3
"lib1","SARS-CoV-2","CCGCGATATAAACACT",1,63.97,9.92,-0.85,0.09,2.32,1.02,0,">1 nonsynonymous","N13V C61R",2
"lib1","SARS-CoV-2","CCGCGATGGGATACAA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F12D A42F",3
"lib1","SARS-CoV-2","CCGCGCAAACCCCGAC",2,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122W E135R L183K",3
"lib1","SARS-CoV-2","CCGCGCAACACATGCA",1,37.15,10.83,0.06,0.1,2.97,1,0,">1 nonsynonymous","V37R F62C",2
"lib1","SARS-CoV-2","CCGCGCACCCACGTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C49E Y93* E154Q",3
"lib1","SARS-CoV-2","CCGCGCATCCCACAAG",1,10.84,9.95,-0.81,0.2,2.39,1,0.01,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","CCGCGCCATACACCCT",3,48.02,6.16,-4.6,0.52,1.5,1.14,0.01,">1 nonsynonymous","N40F Y93Q I104R",3
"lib1","SARS-CoV-2","CCGCGCCGAACTGAAT",2,29.41,9.97,-0.8,0.09,2.97,1,0.01,">1 nonsynonymous","P149Q T170M",2
"lib1","SARS-CoV-2","CCGCGCGCACTAATAC",15,7.43,NA,NA,NA,NA,NA,NA,"stop","N40W T46F T201*",3
"lib1","SARS-CoV-2","CCGCGCGCCAAGGGAA",4,27.25,8.46,-2.3,0.15,2.88,1,0.01,"1 nonsynonymous","N157W",1
"lib1","SARS-CoV-2","CCGCGCTACTCATGTC",8,117.9,8.47,-2.29,0.11,2.45,1.05,0,">1 nonsynonymous","D34T F126T",2
"lib1","SARS-CoV-2","CCGCGCTTATTTGCGT",1,61.5,10.39,-0.38,0.05,2.99,1,0,">1 nonsynonymous","L5V T55L N151P",3
"lib1","SARS-CoV-2","CCGCGGATTCAGGTAC",2,57.27,10.65,-0.11,0.05,2.95,1.02,0,">1 nonsynonymous","N130I P149V",2
"lib1","SARS-CoV-2","CCGCGGCCAGATATGA",2,20.65,6.4,-4.36,0.64,1.5,1.08,0.04,">1 nonsynonymous","K56W V103N G166F T170L Y175N",5
"lib1","SARS-CoV-2","CCGCGGGATTGCGATA",1,28.31,10.85,0.08,0.1,2.95,1,0,">1 nonsynonymous","I2L K199I",2
"lib1","SARS-CoV-2","CCGCGGGCACGAAACA",5,62.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2L V11S G152H Y165V V173S",5
"lib1","SARS-CoV-2","CCGCGGTGTGCTGAGT",7,35.4,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A14P V32A S53F A145Y G166S Y178S",6
"lib1","SARS-CoV-2","CCGCGGTTAAAGATAG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","N4V D34W Q168* G174L",4
"lib1","SARS-CoV-2","CCGCGTAATGAGTTCT",3,11.33,8.47,-2.29,0.21,2.37,1.21,0.01,">1 nonsynonymous","N13V C61K F156S",3
"lib1","SARS-CoV-2","CCGCGTACCTTAGTCC",8,0.16,NA,NA,NA,NA,NA,NA,"stop","F44S Y178* T201N",3
"lib1","SARS-CoV-2","CCGCGTACTAATAGGT",10,32.34,8.52,-2.24,0.28,1.5,1.19,0.04,">1 nonsynonymous","T15Y A105C",2
"lib1","SARS-CoV-2","CCGCGTCCACTCTAAC",4,87.96,10.72,-0.05,0.05,2.94,1.04,0,"1 nonsynonymous","S29V",1
"lib1","SARS-CoV-2","CCGCGTGGCTCAATCT",1,2.03,NA,NA,NA,NA,NA,NA,"stop","N24* T46I T85P T140L",4
"lib1","SARS-CoV-2","CCGCGTTATACCCAAG",1,48.64,6,-4.76,0.65,2.6,1.09,0,">1 nonsynonymous","Y159T G166I",2
"lib1","SARS-CoV-2","CCGCGTTCTGGCAATC",2,8.62,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F12P T63Y Y143S",3
"lib1","SARS-CoV-2","CCGCGTTTCAAACTAC",4,87.62,10.26,-0.5,0.05,3,1,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","CCGCTAAAAATGAAAC",1,25.64,10.68,-0.08,0.11,2.8,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCTAAAGATACAGT",4,46.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F99E P169E",2
"lib1","SARS-CoV-2","CCGCTAAAGTATATTA",4,38.79,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","L95P V173K Y178N A190S",4
"lib1","SARS-CoV-2","CCGCTAACGGCAGAAA",1,39.1,10.89,0.12,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCTAAGCGGTATGT",2,6.09,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","S53P A89R P96A",3
"lib1","SARS-CoV-2","CCGCTAAGGCGGACAA",3,46.75,10.03,-0.73,0.11,2.59,1,0.01,">1 nonsynonymous","N40S T55D N64L F160Y S184R C195F",6
"lib1","SARS-CoV-2","CCGCTAATATCAGTTG",2,6.08,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","Y50L A67V I88P G101I R124S S164Y",6
"lib1","SARS-CoV-2","CCGCTAATGTGTATAA",2,89.26,8.34,-2.43,0.19,2.32,1.09,0.01,">1 nonsynonymous","A105S L122R G155S G166P",4
"lib1","SARS-CoV-2","CCGCTACAAACAATTA",11,15.75,7.13,-3.63,0.34,1.5,1.21,0.04,">1 nonsynonymous","C6F V65K",2
"lib1","SARS-CoV-2","CCGCTACCAGTTAAGG",5,56.08,10.74,-0.02,0.06,2.85,1.04,0,"1 nonsynonymous","T63H",1
"lib1","SARS-CoV-2","CCGCTACTAGTGCCCA",2,32.35,10.05,-0.72,0.11,2.61,1.02,0.01,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","CCGCTAGACTCCCACG",1,36.2,9.98,-0.79,0.12,2.22,1.13,0.01,">1 nonsynonymous","T3L S19T",2
"lib1","SARS-CoV-2","CCGCTAGCTAAAGCTT",4,53.88,10.27,-0.5,0.08,2.71,1,0,">1 nonsynonymous","K48N D59P S129G",3
"lib1","SARS-CoV-2","CCGCTATCTTCACATG",2,77.07,9.56,-1.21,0.13,1.99,1.04,0.01,">1 nonsynonymous","L5R V11D G83N T201V",4
"lib1","SARS-CoV-2","CCGCTATTAGCGAGCT",2,29.45,10.24,-0.53,0.05,2.88,1.05,0,">1 nonsynonymous","S36M G155H",2
"lib1","SARS-CoV-2","CCGCTCAAATAAACAA",12,164.98,9.51,-1.25,0.09,1.76,1.09,0,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","CCGCTCACCCTAACTG",3,53.82,10.56,-0.2,0.03,2.89,1.06,0,"1 nonsynonymous","F44D",1
"lib1","SARS-CoV-2","CCGCTCATGCGACGCA",7,75.76,10.03,-0.74,0.08,2.4,1.03,0,">1 nonsynonymous","I104S K198P",2
"lib1","SARS-CoV-2","CCGCTCCAAGACCCTG",1,34.27,8.76,-2.01,0.11,2.81,1.08,0.01,">1 nonsynonymous","G155L Q168T",2
"lib1","SARS-CoV-2","CCGCTCCCCAATACTA",13,146.57,10.8,0.04,0.06,2.95,1.03,0,"1 nonsynonymous","L122I",1
"lib1","SARS-CoV-2","CCGCTCCCCCGAGTTA",4,14.58,10.56,-0.21,0.18,2.54,1.09,0.01,">1 nonsynonymous","I2K I104C",2
"lib1","SARS-CoV-2","CCGCTCGGGGCACTTT",1,72.88,10.7,-0.06,0.05,2.93,1.01,0,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","CCGCTCTACAACACAA",1,1.66,NA,NA,NA,NA,NA,NA,"stop","R16* L57D T100H N107S Y119H C195Y",6
"lib1","SARS-CoV-2","CCGCTCTAGTCTCGGC",5,0.57,NA,NA,NA,NA,NA,NA,"stop","I80* L111I V115K S184T",4
"lib1","SARS-CoV-2","CCGCTCTCCAAACCTA",4,34.44,10.75,-0.01,0.09,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCTCTGTAACGGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N4* E10N C61D",3
"lib1","SARS-CoV-2","CCGCTCTGTACCCCGA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","L5N V37* F99* W106Q T170M",5
"lib1","SARS-CoV-2","CCGCTGAAAATTTAAT",2,8.76,9.1,-1.66,0.36,1.5,1,0.06,">1 nonsynonymous","G51W L60W",2
"lib1","SARS-CoV-2","CCGCTGACAGCATTAT",2,18.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R P82V Q144F P149Q",4
"lib1","SARS-CoV-2","CCGCTGACGTGAAATT",4,64.99,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","C6L G146R Q176E",3
"lib1","SARS-CoV-2","CCGCTGAGTAACTTAA",4,45.76,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9K N92K S113P N120L G196C",5
"lib1","SARS-CoV-2","CCGCTGCAACTTTAAT",2,97.9,9.38,-1.39,0.17,1.65,1.16,0.01,">1 nonsynonymous","P133K F185Y",2
"lib1","SARS-CoV-2","CCGCTGCATAAGACTA",2,31.44,8.66,-2.1,0.14,1.55,1.13,0.01,">1 nonsynonymous","D59L K87T L122P",3
"lib1","SARS-CoV-2","CCGCTGCGACTCCATC",1,2.72,NA,NA,NA,NA,NA,NA,"stop","F44C Y50* D59P Y143I",4
"lib1","SARS-CoV-2","CCGCTGGAGGACTATG",8,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112P K132I",2
"lib1","SARS-CoV-2","CCGCTGTACACCCCTT",2,8.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42L D90V R136A",3
"lib1","SARS-CoV-2","CCGCTGTATTAAATAA",4,40.74,9.8,-0.97,0.09,2.55,1.11,0,">1 nonsynonymous","L57V Y121H K199N",3
"lib1","SARS-CoV-2","CCGCTGTCAGCCCAAA",9,65.67,10.72,-0.04,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGCTGTCGCACACAT",13,99.12,10.48,-0.28,0.06,2.85,1.04,0,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","CCGCTTACTAGACTAG",1,28.29,8.56,-2.2,0.09,2.86,1.06,0,">1 nonsynonymous","I2Y S113M",2
"lib1","SARS-CoV-2","CCGCTTCAAACCCTAG",2,9.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31F N40G A89S N120G F134R",5
"lib1","SARS-CoV-2","CCGCTTCCACAACCGT",2,23.77,6,-4.76,1.98,1.5,1.14,0.01,">1 nonsynonymous","S113F N171L Y178F",3
"lib1","SARS-CoV-2","CCGCTTCGCGTAAACT",1,26.96,10.45,-0.31,0.06,2.99,1,0,"1 nonsynonymous","G116T",1
"lib1","SARS-CoV-2","CCGCTTGAACTCAATA",5,137.34,10.06,-0.71,0.02,2.93,1.01,0,">1 nonsynonymous","G9W G174E",2
"lib1","SARS-CoV-2","CCGCTTGATCAAAAAT",4,2.41,NA,NA,NA,NA,NA,NA,"stop","F44L T55D D97M S113* I138Y",5
"lib1","SARS-CoV-2","CCGCTTGCGCATAAAA",11,175.35,10.51,-0.25,0.03,2.92,1.02,0,"1 nonsynonymous","K128W",1
"lib1","SARS-CoV-2","CCGCTTGTAACGAGTG",3,22.16,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","Y50T W106R P169I",3
"lib1","SARS-CoV-2","CCGCTTTACCATTAAA",4,38.97,10.17,-0.59,0.1,2.68,1,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","CCGCTTTGTAAAGTAA",2,12.82,9.7,-1.06,0.15,2.68,1.2,0.01,">1 nonsynonymous","K56M G174C",2
"lib1","SARS-CoV-2","CCGCTTTTAGGATGTT",4,31.03,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","Y93T Y121E",2
"lib1","SARS-CoV-2","CCGGAAAAATACGGAT",9,156.44,10.06,-0.71,0.06,2.78,1.02,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","CCGGAAAATGTGATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* S45D V180N",3
"lib1","SARS-CoV-2","CCGGAAACACTATAGC",1,9.93,10.1,-0.66,0.12,2.83,1,0.01,">1 nonsynonymous","C6V K199H",2
"lib1","SARS-CoV-2","CCGGAAACGCAAGCCT",2,17.32,10.47,-0.3,0.13,2.94,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCGGAAACTCATCCTG",4,55.85,8.31,-2.45,0.15,2.02,1.07,0.01,">1 nonsynonymous","S41I G117Y S139D T201R",4
"lib1","SARS-CoV-2","CCGGAAAGACGACAGC",6,45.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L W106F V173S",3
"lib1","SARS-CoV-2","CCGGAAATCTTATGTA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L A22T K94S T201C",4
"lib1","SARS-CoV-2","CCGGAAATCTTGCTTC",3,0,NA,NA,NA,NA,NA,NA,"stop","I2R V37E T55* S129R",4
"lib1","SARS-CoV-2","CCGGAAATGATTATCG",18,349.48,9.35,-1.41,0.05,2.85,1.09,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","CCGGAAATGTCAAAAG",9,145.86,10.85,0.08,0.06,2.95,1.01,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","CCGGAACAACACATGA",1,84.58,10.59,-0.17,0.05,2.94,1.01,0,"1 nonsynonymous","Y39D",1
"lib1","SARS-CoV-2","CCGGAACATAAAAATA",10,177.54,10.28,-0.48,0.05,2.83,1.02,0,">1 nonsynonymous","W106F K114A L122N",3
"lib1","SARS-CoV-2","CCGGAACATTTGCCAG",5,2.74,NA,NA,NA,NA,NA,NA,"stop","K56F L95Y L131* P161D Q168D",5
"lib1","SARS-CoV-2","CCGGAACCATGAGGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y93T E186*",2
"lib1","SARS-CoV-2","CCGGAAGAAGCCTAGA",11,111.68,6,-4.76,0.66,1.5,1.14,0,">1 nonsynonymous","G9R L95Y",2
"lib1","SARS-CoV-2","CCGGAAGTTAACCAAA",2,50.55,8.43,-2.33,0.18,2.1,1.19,0.01,">1 nonsynonymous","G9K T46G G166V",3
"lib1","SARS-CoV-2","CCGGAATAAAATTTAC",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55R F62E C195G",3
"lib1","SARS-CoV-2","CCGGAATACATTGTAA",1,7.78,6.39,-4.37,0.87,3,1,0.01,">1 nonsynonymous","T55D T85Y T100N N107L S139M G174D",6
"lib1","SARS-CoV-2","CCGGAATCCACCGGTC",1,0.9,NA,NA,NA,NA,NA,NA,"stop","T3* T15* T55D L95I W106C K198*",6
"lib1","SARS-CoV-2","CCGGAATCGTACACGG",6,63.5,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","R16E F44R Y121L V173T T201A",5
"lib1","SARS-CoV-2","CCGGAATGCAACCCAA",2,58.46,10,-0.76,0.06,2.91,1,0,">1 nonsynonymous","S36E R73S P149R",3
"lib1","SARS-CoV-2","CCGGACAATCAACCAC",3,45.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14C G146M E154V G172E",4
"lib1","SARS-CoV-2","CCGGACACATAACCAA",7,170.54,9.91,-0.85,0.09,1.98,1.05,0,">1 nonsynonymous","N4P F12Y",2
"lib1","SARS-CoV-2","CCGGACACATAGCTTA",2,9819.71,10.63,-0.14,0.03,2.95,1.01,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","CCGGACACATTGAAGT",4,42.66,9.61,-1.15,0.07,2.84,1.03,0,">1 nonsynonymous","Y50W Y119G",2
"lib1","SARS-CoV-2","CCGGACGACATACAGG",1,10.51,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","C31K S36C C49E D98A Y119E",5
"lib1","SARS-CoV-2","CCGGACTTCATGAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7H F44* P197L",3
"lib1","SARS-CoV-2","CCGGAGAAAACAAGAA",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S36M",2
"lib1","SARS-CoV-2","CCGGAGACACGAAATA",1,9.49,10.87,0.11,0.11,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGAGACACGGTGTC",3,69.6,9.74,-1.02,0.04,2.88,1.02,0,">1 nonsynonymous","N110V Q144M G166S",3
"lib1","SARS-CoV-2","CCGGAGACATGTCCCT",5,179.26,10.55,-0.21,0.05,2.83,1.04,0,"1 nonsynonymous","S184C",1
"lib1","SARS-CoV-2","CCGGAGCGGTAATACG",14,171.87,10.74,-0.03,0.06,2.81,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGAGCTACCCAGAT",2,38.45,10.37,-0.39,0.03,2.75,1.07,0,">1 nonsynonymous","T3F A22K H189I",3
"lib1","SARS-CoV-2","CCGGAGCTTCTATGAA",5,64.08,8.03,-2.74,0.35,1.5,1.15,0.05,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","CCGGAGTAAAAGCACA",2,80.86,10.25,-0.52,0.03,2.91,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","CCGGAGTGTTATAAAA",2,10.91,7.64,-3.12,0.26,1.81,1.18,0.02,">1 nonsynonymous","A18R F62K T100S",3
"lib1","SARS-CoV-2","CCGGAGTTACACAATG",8,106.29,10.43,-0.33,0.03,2.92,1.03,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","CCGGAGTTCCAGGGCA",5,45.26,10.24,-0.52,0.08,2.75,1,0,">1 nonsynonymous","T3M D98F",2
"lib1","SARS-CoV-2","CCGGATAAAAAGAGAA",2,8.38,8.48,-2.29,0.13,2.5,1.01,0.01,"1 nonsynonymous","I142G",1
"lib1","SARS-CoV-2","CCGGATAAAACTATTT",7,252.24,9.47,-1.29,0.06,2.76,1.07,0,">1 nonsynonymous","A89S Y119R E154M K199W",4
"lib1","SARS-CoV-2","CCGGATAAAGAACAGA",10,126.11,10.73,-0.03,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGATAACGACATTT",2,0.23,NA,NA,NA,NA,NA,NA,"stop","T15H C61* T140L Q163Y Y175T",5
"lib1","SARS-CoV-2","CCGGATACCATACCCG",3,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I G101V P161H G196W",4
"lib1","SARS-CoV-2","CCGGATACCGTTCACA",5,62,9.79,-0.97,0.08,2.03,1.06,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","CCGGATAGAATGTTAA",2,135.59,10.23,-0.54,0.05,2.9,1.04,0,">1 nonsynonymous","V37D G174Y",2
"lib1","SARS-CoV-2","CCGGATATGATTCAAC",2,0.88,NA,NA,NA,NA,NA,NA,"stop","S19W Q84L L131*",3
"lib1","SARS-CoV-2","CCGGATATTCCCACCT",3,18.33,7.24,-3.52,0.54,1.64,1.24,0.06,">1 nonsynonymous","C49S G174T",2
"lib1","SARS-CoV-2","CCGGATCAATAATGCA",13,19.49,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","D34S T85W D112C I142L",4
"lib1","SARS-CoV-2","CCGGATCACAATCGTA",7,34.48,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","S41F G74S I138K Y165W",4
"lib1","SARS-CoV-2","CCGGATCACGTAAAGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N130Y",1
"lib1","SARS-CoV-2","CCGGATGGGAAGAAGT",1,9.77,8.97,-1.79,0.15,2.55,1.11,0.01,">1 nonsynonymous","L60G D112E",2
"lib1","SARS-CoV-2","CCGGATTTGGACCTAA",7,82.18,10.1,-0.66,0.07,2.22,1,0,">1 nonsynonymous","A22E S36C D59F N171W",4
"lib1","SARS-CoV-2","CCGGCAAACACGAATA",4,8.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2E F99L N130M L183R",4
"lib1","SARS-CoV-2","CCGGCAACAGGTAGTA",8,45.01,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49Q V71Q K128P G166L",4
"lib1","SARS-CoV-2","CCGGCAACCAGCAGAA",14,34.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V37F F47S L131W N151S",4
"lib1","SARS-CoV-2","CCGGCAACTCTCGGAC",1,18.91,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","Y35K A81S G116L G146M T201M",5
"lib1","SARS-CoV-2","CCGGCAATGATTGTAT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S A42L F99P L122R I138Y",5
"lib1","SARS-CoV-2","CCGGCAGGTCACCCTG",2,12.53,6,-4.76,2,3,1.04,0.02,">1 nonsynonymous","F44V G83V N107M",3
"lib1","SARS-CoV-2","CCGGCATATCAAACTC",2,49.96,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D97E N118P F126S Q168L",4
"lib1","SARS-CoV-2","CCGGCATGATTTATTT",2,26.31,10.66,-0.1,0.11,2.8,1.16,0.01,">1 nonsynonymous","Y35L F62V",2
"lib1","SARS-CoV-2","CCGGCCAACCAACGCA",5,88.19,10.2,-0.57,0.05,2.84,1,0,">1 nonsynonymous","K114N S139C",2
"lib1","SARS-CoV-2","CCGGCCATCAGTGAGT",1,156.91,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K56I S164H Q168P",3
"lib1","SARS-CoV-2","CCGGCCCTACATCTGA",1,18.45,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T85C L95P T140R G174N V181A",5
"lib1","SARS-CoV-2","CCGGCGCACACTTAGC",2,35.28,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45L N157L",2
"lib1","SARS-CoV-2","CCGGCGCGTACAAGTT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","F47L V103L G116C Y143G T201*",5
"lib1","SARS-CoV-2","CCGGCGGAATTACAGT",6,42.55,8.66,-2.11,0.29,1.66,1.22,0.03,">1 nonsynonymous","F12I G86N",2
"lib1","SARS-CoV-2","CCGGCGGATCTAATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R T63L Y91L I104K",4
"lib1","SARS-CoV-2","CCGGCTAACGAACAAG",4,0.52,NA,NA,NA,NA,NA,NA,"stop","D98E V103M S113Q F160*",4
"lib1","SARS-CoV-2","CCGGCTAAGAAGCAAC",3,1.03,NA,NA,NA,NA,NA,NA,"stop","G116Q R136* G172R",3
"lib1","SARS-CoV-2","CCGGCTAAGCTCACCT",2,1.51,NA,NA,NA,NA,NA,NA,"stop","Y91* R136I",2
"lib1","SARS-CoV-2","CCGGCTACATGCTGAT",1,20.42,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","G86F S147W",2
"lib1","SARS-CoV-2","CCGGCTACGGAACTCT",2,30.22,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y50N V71E I88L",3
"lib1","SARS-CoV-2","CCGGCTATGGTGTATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L S41L Y91E D112V",4
"lib1","SARS-CoV-2","CCGGCTATGTAAACCG",10,79.58,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12G D98G L122A E135R",4
"lib1","SARS-CoV-2","CCGGCTCAACTGCTAA",2,19.86,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N4V P54G L60G L95A N157Y",5
"lib1","SARS-CoV-2","CCGGCTCTTACTACCA",1,15.28,9.98,-0.79,0.17,2.2,1.08,0.01,">1 nonsynonymous","S36M L57Q",2
"lib1","SARS-CoV-2","CCGGCTGTGGACTGCG",1,33.49,9.15,-1.61,0.17,2.24,1.14,0.01,">1 nonsynonymous","S45F Q168G",2
"lib1","SARS-CoV-2","CCGGCTTGACTACAAG",1,15.31,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V52C G83H G86I Y93L D97N N118Y C158P F167R",8
"lib1","SARS-CoV-2","CCGGGAAATAAGAAGG",2,45.43,10.74,-0.02,0.08,2.86,1.05,0,">1 nonsynonymous","K132R S139R",2
"lib1","SARS-CoV-2","CCGGGAATACCAAAAC",2,57.2,10.64,-0.13,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGGAATCAATTAAC",5,33.06,8.64,-2.12,0.3,1.5,1.12,0.04,"1 nonsynonymous","S19W",1
"lib1","SARS-CoV-2","CCGGGAATCGCAATCT",4,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A F70L G101S",3
"lib1","SARS-CoV-2","CCGGGAATCTAAACTG",4,21.14,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","S29G S41P P96L A145F",4
"lib1","SARS-CoV-2","CCGGGACAAAACGTTA",2,0.66,NA,NA,NA,NA,NA,NA,"stop","V37W K48* K94V A105I",4
"lib1","SARS-CoV-2","CCGGGACTTCTGAGTA",10,25.07,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","W23L D34S S45R P54Q D90R P133G T170V",7
"lib1","SARS-CoV-2","CCGGGAGGACATTATA",1,2.06,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCGGGATAGACGATCA",4,88.45,6.92,-3.84,0.32,1.5,1.14,0.02,">1 nonsynonymous","I2N R179A",2
"lib1","SARS-CoV-2","CCGGGCCAAAATAAGC",1,20.34,8.69,-2.07,0.05,2.94,1.06,0,">1 nonsynonymous","N118F L125Q",2
"lib1","SARS-CoV-2","CCGGGCGGTGCCGAAA",4,64.38,6.02,-4.75,1.25,1.5,1.26,0.03,">1 nonsynonymous","F47R F99S",2
"lib1","SARS-CoV-2","CCGGGGATTCTCTCGT",2,6.44,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","I2V T15F V37Y K94T T148I",5
"lib1","SARS-CoV-2","CCGGGGCAGTTGCCAA",2,15.89,6,-4.76,2,1.5,1.14,0.04,"1 nonsynonymous","I72K",1
"lib1","SARS-CoV-2","CCGGGTCTATAACAAT",12,158.32,10.57,-0.2,0.05,2.93,1.03,0,">1 nonsynonymous","L5R N24R D34N I72V",4
"lib1","SARS-CoV-2","CCGGTAACAACCGGAG",6,98.23,8.55,-2.21,0.14,2.61,1.07,0.01,">1 nonsynonymous","T15C G117E N130P",3
"lib1","SARS-CoV-2","CCGGTAACATATTACC",1,32.42,10.74,-0.02,0.06,2.91,1.06,0,">1 nonsynonymous","Y39M C195S",2
"lib1","SARS-CoV-2","CCGGTAACCGGCCTTA",3,185.8,10.47,-0.29,0.05,2.94,1.02,0,"1 nonsynonymous","K87P",1
"lib1","SARS-CoV-2","CCGGTAAGAAGATGAA",2,56.37,9.37,-1.39,0.08,2.75,1.15,0,">1 nonsynonymous","T63M T170E",2
"lib1","SARS-CoV-2","CCGGTACACATGCGCA",3,58.95,10.76,-0.01,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGTACACCTATTGA",2,57.46,10.15,-0.61,0.05,2.9,1.03,0,">1 nonsynonymous","K56V G83F G116D",3
"lib1","SARS-CoV-2","CCGGTACTTGCCGTGA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","I2H E10H C61T D68Q N151C Y175I E186N P197*",8
"lib1","SARS-CoV-2","CCGGTACTTTGTAGTA",6,34.91,9.75,-1.01,0.14,2,1.12,0.01,">1 nonsynonymous","P7V A33L I80L L122I",4
"lib1","SARS-CoV-2","CCGGTAGCCATCATAG",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E N64L Q163T G174V",4
"lib1","SARS-CoV-2","CCGGTAGCGTATTTTC",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F F70M C150L Y159W T201Y",5
"lib1","SARS-CoV-2","CCGGTCAATTGATATA",1,68.92,10.61,-0.16,0.06,2.91,1.06,0,">1 nonsynonymous","P149I L187M K198N",3
"lib1","SARS-CoV-2","CCGGTCAGCTACTTGC",5,57.59,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V20R V115T",2
"lib1","SARS-CoV-2","CCGGTCATGCTATGGA",6,69,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F99S Y159S F167L",3
"lib1","SARS-CoV-2","CCGGTCCCCCTTATAT",3,53.95,9.96,-0.8,0.09,1.89,1.06,0,">1 nonsynonymous","A89C T100R E135S",3
"lib1","SARS-CoV-2","CCGGTCCTAACCCACT",3,7.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7T F12S Q84L T201I",4
"lib1","SARS-CoV-2","CCGGTCCTACGAATTA",1,10.99,10.52,-0.25,0.09,2.94,1.05,0,">1 nonsynonymous","S43N Q84M N151G",3
"lib1","SARS-CoV-2","CCGGTCCTTAAAATGT",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103A R179N",2
"lib1","SARS-CoV-2","CCGGTCGATGTTAAAT",9,9.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F70T V103K",2
"lib1","SARS-CoV-2","CCGGTCGCCAACAAGC",12,198.61,10.65,-0.12,0.03,2.89,1.06,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","CCGGTCGTAATGTTAT",2,54.34,8.78,-1.99,0.09,2.71,1.11,0,">1 nonsynonymous","K56A D98V A145L",3
"lib1","SARS-CoV-2","CCGGTCTGTTGGCTAA",5,32.6,9.66,-1.1,0.35,1.5,1,0.04,">1 nonsynonymous","F17Y Y91T",2
"lib1","SARS-CoV-2","CCGGTGAAAGTGCTGC",3,4.03,NA,NA,NA,NA,NA,NA,"stop","N13F S45G D68E Y91N G116* N120S P177R",7
"lib1","SARS-CoV-2","CCGGTGAAAGTTCGCA",2,7.38,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F8Y N40L C49L D90K T100C I142L",6
"lib1","SARS-CoV-2","CCGGTGAACGAAATAT",2,41.27,10.75,-0.01,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGGTGAATAGATGGC",4,55.13,10.74,-0.03,0.08,2.85,1.07,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","CCGGTGAGCCATATAA",2,22.57,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37D G51W S69G F126I C158V",5
"lib1","SARS-CoV-2","CCGGTGCAGGTAGGAA",3,30.38,9.91,-0.86,0.14,2.54,1.03,0.01,">1 nonsynonymous","S45V I104V",2
"lib1","SARS-CoV-2","CCGGTGCATCATCCCT",3,41.36,10.1,-0.66,0.1,2.52,1,0,">1 nonsynonymous","S41A D90A S129R T140F",4
"lib1","SARS-CoV-2","CCGGTGCATTAGGTAA",3,77.86,8.52,-2.24,0.08,2.99,1.04,0,"1 nonsynonymous","F126A",1
"lib1","SARS-CoV-2","CCGGTGGTAACTAGAT",1,78.8,6,-4.76,1.72,1.5,1.17,0.02,">1 nonsynonymous","I2V G9N Y35G D90T F160A F167P",6
"lib1","SARS-CoV-2","CCGGTGTCAAAATTGA",4,6.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G9M T55C L60Q E141K",4
"lib1","SARS-CoV-2","CCGGTTCCACTCGCGA",3,100.77,10.52,-0.25,0.06,2.9,1.04,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","CCGGTTCGGGCCTGAG",2,8.96,8.6,-2.16,0.39,1.5,1.1,0.06,">1 nonsynonymous","E10V N24S C49V F160H P197T",5
"lib1","SARS-CoV-2","CCGGTTGACTAATAGA",6,61.56,9.2,-1.57,0.1,2.48,1.08,0,">1 nonsynonymous","I2D D97W G146Q",3
"lib1","SARS-CoV-2","CCGGTTGATAGAGCTG",1,2.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31S",1
"lib1","SARS-CoV-2","CCGGTTGTCATTTAGA",6,38.55,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","N64L R124E",2
"lib1","SARS-CoV-2","CCGGTTTATCTGAGGA",1,31.74,8.78,-1.99,0.12,1.82,1.11,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","CCGGTTTGGAGATGGT",1,28.24,6,-4.76,1.97,1.5,1.21,0.02,">1 nonsynonymous","W23R D98E N120S",3
"lib1","SARS-CoV-2","CCGTAAAACAAAGTTT",4,79.18,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S29T Y121D R179S",3
"lib1","SARS-CoV-2","CCGTAAAAGTAGAAGC",1,17.03,8.38,-2.39,0.31,1.5,1.16,0.03,">1 nonsynonymous","F44P N107V",2
"lib1","SARS-CoV-2","CCGTAAAATGGGCACG",1,167.86,9.19,-1.57,0.1,2.38,1.14,0,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","CCGTAAAGGTATGAAT",4,51.82,10.4,-0.36,0.07,2.84,1.03,0,">1 nonsynonymous","L5A G166N",2
"lib1","SARS-CoV-2","CCGTAAATATCGATGA",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52G C158F",2
"lib1","SARS-CoV-2","CCGTAAATCCATGACT",1,1.1,NA,NA,NA,NA,NA,NA,"stop","R16S P82K G101Y N120L R136E Y143*",6
"lib1","SARS-CoV-2","CCGTAAATCGATTTTT",8,100.63,10.78,0.01,0.09,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCGTAAATTTCATGTA",4,32.91,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4S N13H V37I Y91S S113T",5
"lib1","SARS-CoV-2","CCGTAACAAGGAATCT",1,9.81,8.52,-2.25,0.14,2.37,1.05,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","CCGTAACCTGAACAAG",7,86.79,10.73,-0.04,0.08,2.91,1.07,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","CCGTAACCTTTACCCC",1,42.1,10.21,-0.55,0.18,2.69,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCGTAACGGCCATTAA",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R I80M C150F",3
"lib1","SARS-CoV-2","CCGTAACTACGACAAT",3,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120G L187W",2
"lib1","SARS-CoV-2","CCGTAAGAAAAAATTT",4,54.88,10.3,-0.46,0.05,2.87,1.04,0,">1 nonsynonymous","V37S D90S G152M",3
"lib1","SARS-CoV-2","CCGTAAGAATCCGTAT",2,1.46,NA,NA,NA,NA,NA,NA,"stop","V37* R127K T148S",3
"lib1","SARS-CoV-2","CCGTAATACCTGAATA",1,24.29,9.31,-1.45,0.08,2.95,1.05,0,">1 nonsynonymous","A42G S113C",2
"lib1","SARS-CoV-2","CCGTAATAGGGGGATA",5,1.11,NA,NA,NA,NA,NA,NA,"stop","A22K D59* E135K",3
"lib1","SARS-CoV-2","CCGTAATATAATAAAG",11,96.69,10.75,-0.01,0.04,2.94,1.01,0,">1 nonsynonymous","S41T D97A T201R",3
"lib1","SARS-CoV-2","CCGTAATCTACATCTA",2,15.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C102L G146V",2
"lib1","SARS-CoV-2","CCGTAATGTTAAGTGA",1,29.51,10.88,0.12,0.12,2.93,1.04,0.01,">1 nonsynonymous","Y35W P149E Y178F",3
"lib1","SARS-CoV-2","CCGTAATTTCGGCCTA",2,34.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P82T F99V",2
"lib1","SARS-CoV-2","CCGTACAAAAGAATAA",2,45.66,10.34,-0.43,0.13,2.65,1.07,0.01,">1 nonsynonymous","T3Y T55D D97C",3
"lib1","SARS-CoV-2","CCGTACAAAGCTCATT",4,19.92,9.09,-1.67,0.24,1.57,1.14,0.03,">1 nonsynonymous","F12L T55M F134S L183V",4
"lib1","SARS-CoV-2","CCGTACAAATAACTGG",2,5.91,6,-4.76,1.75,3,1.13,0.01,">1 nonsynonymous","F99I Y121S",2
"lib1","SARS-CoV-2","CCGTACAAGAAATGGT",7,62.47,6.13,-4.63,0.52,1.5,1.06,0.01,">1 nonsynonymous","V71A F126S C150T",3
"lib1","SARS-CoV-2","CCGTACAATAAGTGTT",2,38.3,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F47N G166F G172L",3
"lib1","SARS-CoV-2","CCGTACACAACTGGTA",7,46.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D75I I88S",2
"lib1","SARS-CoV-2","CCGTACACGCTACTAA",4,62.26,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","V77M F99L S113L",3
"lib1","SARS-CoV-2","CCGTACAGAATTACCG",7,197.5,9.91,-0.85,0.05,2.82,1.04,0,"1 nonsynonymous","T170F",1
"lib1","SARS-CoV-2","CCGTACAGATGTTGTG",7,74.05,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F47C D112K E141S",3
"lib1","SARS-CoV-2","CCGTACATAAAAATCT",1,6.07,10.13,-0.64,0.14,2.97,1,0.01,">1 nonsynonymous","I28V A42Y T100R G152A",4
"lib1","SARS-CoV-2","CCGTACATAATGCATT",4,34.59,8.34,-2.43,0.24,1.5,1.21,0.02,">1 nonsynonymous","G9K D34L F62A G152W",4
"lib1","SARS-CoV-2","CCGTACATATCTCACA",1,28.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44S K94T A105T R127T Y143K C158T",6
"lib1","SARS-CoV-2","CCGTACCCTAAATTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10P N110* G166P",3
"lib1","SARS-CoV-2","CCGTACCTCAGCGCCA",2,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I K94S G116Y I142Y",4
"lib1","SARS-CoV-2","CCGTACGATTTGCCAT",1,204.18,9.72,-1.05,0.11,2.08,1.06,0,">1 nonsynonymous","S36R Q79G",2
"lib1","SARS-CoV-2","CCGTACTAACCCCTTA",3,2.94,NA,NA,NA,NA,NA,NA,"stop","S41V P149*",2
"lib1","SARS-CoV-2","CCGTACTAATTCCTGG",6,70.87,10.23,-0.53,0.07,2.9,1.02,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","CCGTACTAGGGTTACT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I K94V T100P",3
"lib1","SARS-CoV-2","CCGTAGAAAATCAACC",8,229.48,10.73,-0.04,0.05,2.91,1.04,0,">1 nonsynonymous","S129K T201S",2
"lib1","SARS-CoV-2","CCGTAGACCTTGTCAA",2,21.16,6,-4.76,1.87,3,1.15,0,">1 nonsynonymous","D34V R73W I80M N110T L122V Q176R",6
"lib1","SARS-CoV-2","CCGTAGACGAACGCAG",1,61.65,10.79,0.02,0.06,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CCGTAGAGCGAGATAA",2,55.3,10.5,-0.26,0.05,2.97,1,0,"1 nonsynonymous","T46A",1
"lib1","SARS-CoV-2","CCGTAGCCATAACCAA",2,42.13,9.21,-1.55,0.06,2.8,1.1,0,">1 nonsynonymous","V52Y Y119P",2
"lib1","SARS-CoV-2","CCGTAGCTAATTCGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72N G117F L125R",3
"lib1","SARS-CoV-2","CCGTAGGCTTAAAAAG",3,73.19,10.36,-0.41,0.06,2.88,1.05,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","CCGTAGGTAGAAATAA",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116H G152I A190Y S200F",4
"lib1","SARS-CoV-2","CCGTAGGTCGAATGAG",4,0,NA,NA,NA,NA,NA,NA,"stop","N4Y D59A K128*",3
"lib1","SARS-CoV-2","CCGTAGTAACCCTGAC",3,69.68,10.45,-0.32,0.04,2.93,1.03,0,">1 nonsynonymous","C61Y P149Y",2
"lib1","SARS-CoV-2","CCGTAGTACGACGCAT",11,51.03,6,-4.76,1.95,1.5,1.17,0.01,">1 nonsynonymous","K48Y E76A D90S R127W Y143S G152Y",6
"lib1","SARS-CoV-2","CCGTAGTCAATCACGG",2,19.12,7.12,-3.64,0.4,1.5,1.15,0.06,">1 nonsynonymous","A105Y R127S H189Y",3
"lib1","SARS-CoV-2","CCGTAGTTAAATCTCG",6,2983.41,9.75,-1.01,0.03,2.86,1.03,0,"1 nonsynonymous","N109D",1
"lib1","SARS-CoV-2","CCGTATAACCGAATCA",4,18.07,6.2,-4.57,0.34,3,1.2,0,">1 nonsynonymous","C6Y C31H T63G N92A N151C",5
"lib1","SARS-CoV-2","CCGTATAACGAACGAG",1,6.71,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G101F S113N T201I",3
"lib1","SARS-CoV-2","CCGTATACATAACATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25M S43N C61L S139F E154F P161G Q168S",7
"lib1","SARS-CoV-2","CCGTATATGACCCGTA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","N58* K94A V103L R124P I138E C150E",6
"lib1","SARS-CoV-2","CCGTATCATTATTTGT",10,54.52,10.59,-0.18,0.06,2.88,1.05,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","CCGTATCCAAGTAATT",1,6.8,8.88,-1.89,0.1,2.73,1.15,0.01,">1 nonsynonymous","I2A S45T C61Q G166C K198F",5
"lib1","SARS-CoV-2","CCGTATCCAATCATAA",3,10.67,10.55,-0.22,0.12,2.8,1.09,0,">1 nonsynonymous","V37M F134N V173Y",3
"lib1","SARS-CoV-2","CCGTATGCCGGCTTAC",1,10.42,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15R F70E W106T T140S",4
"lib1","SARS-CoV-2","CCGTATGGTGAAGTCT",5,34.69,10.68,-0.09,0.05,2.87,1.05,0,">1 nonsynonymous","T100S Q163L P197S",3
"lib1","SARS-CoV-2","CCGTATGTCTTATCAT",4,36.69,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D97V V115T R179L",3
"lib1","SARS-CoV-2","CCGTATTCAACACTAA",4,51.83,10.36,-0.4,0.06,2.84,1.02,0,"1 nonsynonymous","V52P",1
"lib1","SARS-CoV-2","CCGTATTTCTTGTTAC",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N4Q E10G P96* G146*",4
"lib1","SARS-CoV-2","CCGTATTTGTGTAAAA",7,5.64,NA,NA,NA,NA,NA,NA,"stop","N1I L60Q N118I Y143*",4
"lib1","SARS-CoV-2","CCGTCAAAATTCATGT",9,359.06,8.48,-2.28,0.14,1.79,1.09,0.01,">1 nonsynonymous","S53T L60Q D97N T148D Q176L",5
"lib1","SARS-CoV-2","CCGTCAATATACTAAT",2,18.41,10.46,-0.31,0.09,2.81,1,0,">1 nonsynonymous","F8L T15L Y35T",3
"lib1","SARS-CoV-2","CCGTCAATGATCATCT",2,61.13,10.88,0.11,0.1,2.93,1.04,0,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","CCGTCACAAAAAGTAT",2,82.97,6.09,-4.68,0.4,1.5,1.14,0,">1 nonsynonymous","K26S C61G Y91D K114Q K128C",5
"lib1","SARS-CoV-2","CCGTCAGGCCTGGACA",2,1.36,NA,NA,NA,NA,NA,NA,"stop","L60R A89R F99Y K114L Y121T Q144P P161*",7
"lib1","SARS-CoV-2","CCGTCATACGGTCACG",2,23.27,10.62,-0.14,0.05,2.89,1.05,0,"1 nonsynonymous","Q144G",1
"lib1","SARS-CoV-2","CCGTCATCGGGATAGT",1,3.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","CCGTCATTACTACGGG",7,21.62,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G9V L38Q C49F G74H F160N G166R Y178F T201P",8
"lib1","SARS-CoV-2","CCGTCATTCCATCGTA",2,42.28,8.39,-2.38,0.36,1.5,1,0.06,">1 nonsynonymous","A89T Y123C F160L",3
"lib1","SARS-CoV-2","CCGTCCAGCTAATTAC",1,25.28,10.66,-0.11,0.08,2.93,1,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","CCGTCCATAACAGAAA",2,20.65,8.56,-2.21,0.15,2.19,1.12,0.01,">1 nonsynonymous","K87T Y121R G152R",3
"lib1","SARS-CoV-2","CCGTCCCAATGATATC",1,72.49,10.1,-0.66,0.07,2.77,1.01,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","CCGTCCCCCGCCTGCT",7,33.19,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y66L N92T W106L",3
"lib1","SARS-CoV-2","CCGTCCCTCATAATCC",4,49.62,10.23,-0.53,0.09,2.66,1.06,0,">1 nonsynonymous","P7L K26R N58G K128N P197W",5
"lib1","SARS-CoV-2","CCGTCCGAGGGCGTAC",1,29.74,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","A33R D90L N157I S164Y",4
"lib1","SARS-CoV-2","CCGTCCTAAAACGAAT",1,21.14,10.34,-0.42,0.09,2.91,1.01,0,">1 nonsynonymous","C61I P149M",2
"lib1","SARS-CoV-2","CCGTCCTTTTATAAAT",7,254.62,10.24,-0.52,0.04,2.87,1.01,0,">1 nonsynonymous","N1T K56V I142L N151M K198V",5
"lib1","SARS-CoV-2","CCGTCGCATAAACAAG",1,10.83,8.25,-2.51,0.21,2.73,1.14,0.01,">1 nonsynonymous","D34Y D97H T170H",3
"lib1","SARS-CoV-2","CCGTCGCTTTTTGGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I88C R124P E135R G152* T170I T201L",6
"lib1","SARS-CoV-2","CCGTCTAAACCTAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I A89S F99T",3
"lib1","SARS-CoV-2","CCGTCTAAGATGTAAA",4,49.57,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R27P F99Q A105S G152V",4
"lib1","SARS-CoV-2","CCGTCTAATAATGAAC",2,15.5,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C49D F167M",2
"lib1","SARS-CoV-2","CCGTCTACACCGAATT",7,33.66,9.26,-1.51,0.25,1.5,1.13,0.03,">1 nonsynonymous","E10V T15R S129I N130C",4
"lib1","SARS-CoV-2","CCGTCTACAGAGTAAT",10,112.47,10.05,-0.71,0.08,2.63,1.01,0,">1 nonsynonymous","V37R A67F Q84V",3
"lib1","SARS-CoV-2","CCGTCTACTCGCACGC",6,42.7,6,-4.76,2,3,1.11,0,">1 nonsynonymous","C31V V52W G74M Y119V Y165S R179K",6
"lib1","SARS-CoV-2","CCGTCTATTTAATTTA",9,74.34,10.53,-0.24,0.13,2.7,1.12,0.01,"1 nonsynonymous","Y35W",1
"lib1","SARS-CoV-2","CCGTCTCAAATCAAAT",2,47.51,8.3,-2.47,0.13,2.84,1,0.01,">1 nonsynonymous","K56A Y119L N157D",3
"lib1","SARS-CoV-2","CCGTCTCCCGTCCAAC",6,64.09,8.86,-1.91,0.14,1.5,1.08,0.01,">1 nonsynonymous","F8R R16V T100I N151Y",4
"lib1","SARS-CoV-2","CCGTCTCGAGGAAGAC",6,59.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H R25F",2
"lib1","SARS-CoV-2","CCGTCTGTAACCAACT",3,46.72,10.7,-0.06,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGTCTTTTATACGGA",3,22.1,10.2,-0.56,0.14,2.89,1.06,0.02,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","CCGTGAAACAACAAAG",6,1.86,NA,NA,NA,NA,NA,NA,"stop","A89* G101Y S108H",3
"lib1","SARS-CoV-2","CCGTGAACTCAGGCAC",5,33.6,8.13,-2.63,0.23,1.58,1.12,0.02,">1 nonsynonymous","P54V N151I T170S V181L T201A",5
"lib1","SARS-CoV-2","CCGTGACTACTTTTAA",1,6.31,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","I2H A81F P149F L162V",4
"lib1","SARS-CoV-2","CCGTGAGATCATTTAC",7,1.41,NA,NA,NA,NA,NA,NA,"stop","F44L S45K L57* A67L Y159T",5
"lib1","SARS-CoV-2","CCGTGATCTACCGACT",8,175,6.09,-4.68,0.69,1.5,1.18,0.01,">1 nonsynonymous","V11P S43C D90I",3
"lib1","SARS-CoV-2","CCGTGCAATGCACCTG",1,105.92,10.76,0,0.04,2.94,1.05,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","CCGTGCACGCCTACTG",2,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108F S164W",2
"lib1","SARS-CoV-2","CCGTGGAACTGTTGAT",7,49.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102Y",1
"lib1","SARS-CoV-2","CCGTGGGCAAAGACAG",3,10.68,8.45,-2.31,0.35,1.79,1.06,0.05,">1 nonsynonymous","K114D A145E V181L",3
"lib1","SARS-CoV-2","CCGTGGTTTGTTTTGT",2,55.56,10.69,-0.08,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CCGTGTAACTTATTAA",4,81.24,6.77,-4,0.23,1.5,1.13,0.01,">1 nonsynonymous","G9T S43I T46A S139Y C150Q",5
"lib1","SARS-CoV-2","CCGTGTGACTTAACGT",1,8.4,7.43,-3.34,0.67,3,1.01,0.01,">1 nonsynonymous","A14S K87G F99L L125E",4
"lib1","SARS-CoV-2","CCGTTAAAATAACGGA",1,39.78,10.76,0,0.05,2.85,1.06,0,"1 nonsynonymous","I138K",1
"lib1","SARS-CoV-2","CCGTTAAAGACGCTGA",13,118.59,9.14,-1.63,0.15,1.63,1.19,0.01,">1 nonsynonymous","Q79H L162I S184L",3
"lib1","SARS-CoV-2","CCGTTAAAGCAAAACC",7,46.36,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T85F G146N P161L",3
"lib1","SARS-CoV-2","CCGTTAACATGAAAAC",1,14.52,9.36,-1.4,0.18,1.74,1.11,0.02,">1 nonsynonymous","N40W G51T T100M",3
"lib1","SARS-CoV-2","CCGTTAACCCCAGTAA",5,59.22,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A14L G51D Y66T F167D Y175K",5
"lib1","SARS-CoV-2","CCGTTAACCTTATACT",3,49.36,7.87,-2.89,0.29,1.5,1.03,0.03,">1 nonsynonymous","R16L G83V E141Q G166Q",4
"lib1","SARS-CoV-2","CCGTTAAGAACTAGAA",6,101.7,10.8,0.03,0.05,2.91,1.03,0,">1 nonsynonymous","D90Q T201K",2
"lib1","SARS-CoV-2","CCGTTAAGGCGGTGCA",2,48.92,6,-4.76,2,3,1.22,0,">1 nonsynonymous","W23D Y35T D97Q K114R",4
"lib1","SARS-CoV-2","CCGTTACCATCTCTCT",2,10.35,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F99D F156I",2
"lib1","SARS-CoV-2","CCGTTACCGCTCCGAG",12,173.07,10.27,-0.5,0.05,2.76,1.03,0,">1 nonsynonymous","I2L T140P N151L",3
"lib1","SARS-CoV-2","CCGTTACGTACCCGAT",2,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Q N130I",2
"lib1","SARS-CoV-2","CCGTTACTAACCTAAA",1,8.09,9.98,-0.78,0.28,2.38,1.15,0.02,">1 nonsynonymous","D97R N107K",2
"lib1","SARS-CoV-2","CCGTTACTAGCAAATA",1,113.26,10.46,-0.3,0.05,2.93,1.01,0,">1 nonsynonymous","N40Y C61R T148D",3
"lib1","SARS-CoV-2","CCGTTACTCCGCGCGC",2,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A G101F N151H",3
"lib1","SARS-CoV-2","CCGTTACTGTAAAAGG",2,0.06,NA,NA,NA,NA,NA,NA,"stop","G83L T148G Y159C R179*",4
"lib1","SARS-CoV-2","CCGTTACTTACTGGAA",7,70.99,10.45,-0.32,0.05,2.91,1.06,0,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","CCGTTAGACAAGATAA",4,24.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13R Y35T K56T D97L N107S",5
"lib1","SARS-CoV-2","CCGTTAGGACAAAAAA",2,57.62,9.51,-1.26,0.09,2.58,1.06,0,">1 nonsynonymous","T85N Y91W S139T P149S",4
"lib1","SARS-CoV-2","CCGTTAGGTGGATTAT",2,28.5,6.06,-4.7,0.92,1.5,1.21,0.02,">1 nonsynonymous","T63S G86R Y165F",3
"lib1","SARS-CoV-2","CCGTTATAAATACCAA",2,13.03,10.08,-0.68,0.24,2.95,1.07,0.03,">1 nonsynonymous","N1L K94R",2
"lib1","SARS-CoV-2","CCGTTATAAATCTTAT",5,14.11,10.56,-0.2,0.26,1.5,1.12,0.04,">1 nonsynonymous","W106Q E141F G146S",3
"lib1","SARS-CoV-2","CCGTTATAATGCATAT",2,35.23,6.31,-4.45,0.32,1.5,1.09,0.01,">1 nonsynonymous","W23L D34R V52F P82K S129D",5
"lib1","SARS-CoV-2","CCGTTATCATATACAC",2,78.71,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23I S43E G86Y N92V W106T G152I",6
"lib1","SARS-CoV-2","CCGTTATCCCAACGCA",2,29.99,10.85,0.09,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGTTATGCGATACAC",5,107.89,9.65,-1.11,0.11,2.06,1.06,0,">1 nonsynonymous","G9A F17G L122C Q168A",4
"lib1","SARS-CoV-2","CCGTTATTGCGGGTTT",11,61.69,9.62,-1.15,0.15,1.82,1.07,0.01,">1 nonsynonymous","S41L Q84R Y121N",3
"lib1","SARS-CoV-2","CCGTTCACCAAAAACG",1,19.27,10.59,-0.18,0.09,2.84,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGTTCAGTGAGTAGC",3,27.69,9.07,-1.69,0.28,1.5,1,0.04,">1 nonsynonymous","G9A V20A F99L",3
"lib1","SARS-CoV-2","CCGTTCCCCAGAGATG",3,61.46,8.69,-2.07,0.12,2.8,1.1,0,">1 nonsynonymous","L122T F126T E154T Y159H",4
"lib1","SARS-CoV-2","CCGTTCGCAGACTTGA",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S19K G83N D90I T100N N107H",6
"lib1","SARS-CoV-2","CCGTTCTAAAGACAAA",8,137.84,6.77,-3.99,0.24,1.5,1.14,0.01,">1 nonsynonymous","G9M K26A S113I",3
"lib1","SARS-CoV-2","CCGTTCTAAGTCATTA",4,0.04,NA,NA,NA,NA,NA,NA,"stop","F8E N40* T170L T201V",4
"lib1","SARS-CoV-2","CCGTTCTATGGATACA",1,13.36,9.58,-1.18,0.1,2.77,1.05,0,">1 nonsynonymous","L5R Q144G G146V",3
"lib1","SARS-CoV-2","CCGTTGAATTCTCCTA",2,27.51,10.37,-0.39,0.04,2.96,1.02,0,">1 nonsynonymous","K56G K87S",2
"lib1","SARS-CoV-2","CCGTTGATATTGTTAA",3,23.18,6.04,-4.73,1.43,1.5,1.2,0.02,">1 nonsynonymous","T3N A14Y R25S G86P N107C V173F",6
"lib1","SARS-CoV-2","CCGTTGCAAAAGTTAT",5,55.07,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S36L R124D Y165R",3
"lib1","SARS-CoV-2","CCGTTGCAGTTAGTGC",5,94.77,10.68,-0.08,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCGTTGCCCACGAAAT",4,79.35,10.82,0.06,0.07,2.95,1.02,0,">1 nonsynonymous","R27V I138K",2
"lib1","SARS-CoV-2","CCGTTGCTATTTGGAG",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D L95K Y119I F160I",4
"lib1","SARS-CoV-2","CCGTTGGCTAATGCTG",5,114.97,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40P C150W Y165S Y178M T201F",5
"lib1","SARS-CoV-2","CCGTTGGGAATACGTG",2,18.16,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A22S T100D N120V F126T E154I",5
"lib1","SARS-CoV-2","CCGTTGGTATGCCTAG",11,146.49,10.27,-0.49,0.04,2.93,1.02,0,">1 nonsynonymous","Y39M D97A S147C",3
"lib1","SARS-CoV-2","CCGTTGTAGCAAGCTT",6,8.87,10.38,-0.39,0.35,2.58,1.09,0.03,">1 nonsynonymous","G9C K56Y D97Q L162I",4
"lib1","SARS-CoV-2","CCGTTGTCCACCATGG",9,1.05,NA,NA,NA,NA,NA,NA,"stop","G9I I28L L38* P133S N157L",5
"lib1","SARS-CoV-2","CCGTTTAACAGATTAA",11,159.71,10.59,-0.18,0.04,2.89,1.04,0,">1 nonsynonymous","V37K D98R P149S T201Q",4
"lib1","SARS-CoV-2","CCGTTTACCCGAAACC",1,18.06,7.28,-3.49,0.42,1.5,1.09,0.08,">1 nonsynonymous","L5F F99K",2
"lib1","SARS-CoV-2","CCGTTTAGGCGCACTT",2,34.89,10.49,-0.28,0.06,2.88,1.11,0,">1 nonsynonymous","V37E A89S",2
"lib1","SARS-CoV-2","CCGTTTATCGACGACC",3,10.56,10.97,0.21,0.19,2.94,1.03,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CCGTTTATTCTAGATT",4,20.48,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4F Y50C Y121P S129W T170M",5
"lib1","SARS-CoV-2","CCGTTTCACATACTCG",10,187.08,8.87,-1.9,0.11,2.19,1.11,0.01,">1 nonsynonymous","K26A C61K K87S A89V",4
"lib1","SARS-CoV-2","CCGTTTGAAAAACACT",2,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L S113F Y143L",3
"lib1","SARS-CoV-2","CCGTTTGCAACACCCT",7,69.61,6,-4.76,1.55,1.5,1.2,0.02,">1 nonsynonymous","G51P C150G",2
"lib1","SARS-CoV-2","CCGTTTGCATGTACTA",4,12.55,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","F44P D90L L95V G101L Q144S P169S",6
"lib1","SARS-CoV-2","CCGTTTGGAACCTTTT",1,52.18,10.16,-0.61,0.1,2.59,1.01,0.01,">1 nonsynonymous","D34S F44H G146S",3
"lib1","SARS-CoV-2","CCGTTTGTCTGGGCCA",1,51.63,10.67,-0.09,0.03,2.9,1.05,0,">1 nonsynonymous","I28L C61N S129A",3
"lib1","SARS-CoV-2","CCTAAAAAAAATCGTT",3,36.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3C P54L G83V A105I",4
"lib1","SARS-CoV-2","CCTAAAAAAATTTTAC",2,13.78,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N13F I28G F62G I88D F99S Y119T",6
"lib1","SARS-CoV-2","CCTAAAAAAGACGTTT",4,61.59,6,-4.76,2,3,1.18,0,">1 nonsynonymous","D59P G101L P149L",3
"lib1","SARS-CoV-2","CCTAAAAAATAGAATT",4,20.79,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A105N A145D",2
"lib1","SARS-CoV-2","CCTAAAAAATGGTCCT",5,89.59,8.65,-2.11,0.1,2.78,1.09,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","CCTAAAAACTCAATAA",5,75.38,10.71,-0.05,0.03,2.94,1.03,0,">1 nonsynonymous","G9V N130P",2
"lib1","SARS-CoV-2","CCTAAAAACTGGTTGT",7,134.57,10.13,-0.63,0.08,2.56,1.05,0,">1 nonsynonymous","T3L G9C L60Y D97S",4
"lib1","SARS-CoV-2","CCTAAAAAGAAAGTAC",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M A18Q G86P P149K",4
"lib1","SARS-CoV-2","CCTAAAAAGATGAAAC",7,77.03,10.09,-0.68,0.08,2.85,1.07,0,">1 nonsynonymous","C61K F156M",2
"lib1","SARS-CoV-2","CCTAAAAAGATGTAAC",9,149.77,10.74,-0.02,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAAAAAGTCGACCC",2,23.86,10.69,-0.08,0.04,2.86,1.08,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","CCTAAAAAGTGATCAG",2,25.53,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","E10A N30V E76S G172R",4
"lib1","SARS-CoV-2","CCTAAAACAAGGAGCG",5,26.4,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N1W D34R C49R C61R G74I D112R T148P E154I Y178V",9
"lib1","SARS-CoV-2","CCTAAAACTAATAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39* N120S D137Y E141S",4
"lib1","SARS-CoV-2","CCTAAAAGAATCATTT",2,2.35,NA,NA,NA,NA,NA,NA,"stop","F12* S41H A89F",3
"lib1","SARS-CoV-2","CCTAAAAGCCACTACA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","V20P E135* R179S",3
"lib1","SARS-CoV-2","CCTAAAAGTGGTACCT",11,213.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P54R N64P I80E P177G",4
"lib1","SARS-CoV-2","CCTAAAATCGCTCCTT",2,20.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I72Q K87I D97F",3
"lib1","SARS-CoV-2","CCTAAAATGACGGCCA",9,34.77,9.73,-1.03,0.21,1.8,1.11,0.01,">1 nonsynonymous","N1R T15V A89C",3
"lib1","SARS-CoV-2","CCTAAAATGAGATAAA",6,58.58,6,-4.76,0.66,3,1.11,0,">1 nonsynonymous","F62V I72Q V77I Q84H N118V",5
"lib1","SARS-CoV-2","CCTAAAATGCTAAGAG",3,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y N151D Q176D",3
"lib1","SARS-CoV-2","CCTAAAATGTAGGAAA",1,31.45,10.64,-0.12,0.07,2.91,1.01,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","CCTAAACAACCCAAAT",1,16.23,8.32,-2.44,0.19,2.75,1,0.01,">1 nonsynonymous","G117D T170H",2
"lib1","SARS-CoV-2","CCTAAACAAGCGCAAA",3,34.35,9.49,-1.27,0.06,2.88,1.04,0,">1 nonsynonymous","I2P K56T G166T",3
"lib1","SARS-CoV-2","CCTAAACAATGGCATA",10,142.15,10.37,-0.39,0.03,2.9,1.05,0,">1 nonsynonymous","N58A Q144R",2
"lib1","SARS-CoV-2","CCTAAACACTATTATC",4,108.9,9.95,-0.81,0.05,2.71,1.01,0,">1 nonsynonymous","T46I L57M I142F",3
"lib1","SARS-CoV-2","CCTAAACCCTGATGAG",4,1.42,NA,NA,NA,NA,NA,NA,"stop","S19K N107* S139N P169I",4
"lib1","SARS-CoV-2","CCTAAACCTAAACATC",7,131.51,10.71,-0.06,0.06,2.92,1.04,0,">1 nonsynonymous","N24R Y39F S45R",3
"lib1","SARS-CoV-2","CCTAAACCTTGACTCA",1,39.28,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P82L D137S",2
"lib1","SARS-CoV-2","CCTAAACGATACAGTC",4,27.27,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","W23E S139N C150S",3
"lib1","SARS-CoV-2","CCTAAACTCACAAATG",12,437.7,10.75,-0.01,0.05,2.9,1.05,0,">1 nonsynonymous","Y39I V173N",2
"lib1","SARS-CoV-2","CCTAAACTTTAACGCT",2,19.25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49I S53F A105S",3
"lib1","SARS-CoV-2","CCTAAACTTTCGCCTA",4,0,NA,NA,NA,NA,NA,NA,"stop","C31* K56M G86S",3
"lib1","SARS-CoV-2","CCTAAAGACATTCAGA",1,22.63,9.8,-0.96,0.16,2.27,1.08,0.01,">1 nonsynonymous","Y91H T140F",2
"lib1","SARS-CoV-2","CCTAAAGACTGTGTAA",5,68.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9V Y39I V52L F70N Y119A",5
"lib1","SARS-CoV-2","CCTAAAGATAACATAA",11,62.46,10.83,0.06,0.08,2.87,1.08,0,">1 nonsynonymous","V37T K48R",2
"lib1","SARS-CoV-2","CCTAAAGATACCGGGA",2,64.97,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S41V C158G T193I",3
"lib1","SARS-CoV-2","CCTAAAGATTGCCACG",8,49.56,9.81,-0.96,0.12,2,1.08,0.01,"1 nonsynonymous","G86N",1
"lib1","SARS-CoV-2","CCTAAAGCAGAAAACT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149L C158R R179C",3
"lib1","SARS-CoV-2","CCTAAAGCCGGACGTT",4,106.03,10.66,-0.1,0.05,2.94,1.03,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","CCTAAAGCGACCTCCG",5,22.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S W106L P161N",3
"lib1","SARS-CoV-2","CCTAAAGCGAGTACCA",6,116.59,10.23,-0.53,0.04,2.9,1.01,0,"1 nonsynonymous","C49W",1
"lib1","SARS-CoV-2","CCTAAAGCGCCCACAC",5,130.99,10.2,-0.57,0.06,2.78,1.03,0,"1 nonsynonymous","N24L",1
"lib1","SARS-CoV-2","CCTAAAGCTGCATGTT",1,67.55,10.79,0.03,0.08,2.89,1.07,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","CCTAAAGTCCTGAGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","T15I L95* C102K",3
"lib1","SARS-CoV-2","CCTAAAGTGATAAAAA",1,10.1,6,-4.76,1.41,1.5,1.19,0.07,">1 nonsynonymous","C31W I88M",2
"lib1","SARS-CoV-2","CCTAAAGTGGTAGAAG",6,29.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19H N118V G146P Q163G",4
"lib1","SARS-CoV-2","CCTAAATAATCTCAGA",6,81.42,8.31,-2.45,0.15,2,1.1,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","CCTAAATACCTAACTG",6,0.58,NA,NA,NA,NA,NA,NA,"stop","S29G R73Q K94V V103T Y121F R136* P149E",7
"lib1","SARS-CoV-2","CCTAAATCTCATTACG",2,0.23,NA,NA,NA,NA,NA,NA,"stop","F12* F44S V65E T201S",4
"lib1","SARS-CoV-2","CCTAAATGCACAGATA",2,31.58,10.75,-0.02,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAAATGTATCGTAA",2,26.99,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S29G S41R Y91M V103F",4
"lib1","SARS-CoV-2","CCTAAATGTGTTTAAT",7,88.1,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S43L N64L I104R",3
"lib1","SARS-CoV-2","CCTAAATTAACAATCT",4,78.44,10.37,-0.4,0.04,2.85,1,0,">1 nonsynonymous","R16D N107S",2
"lib1","SARS-CoV-2","CCTAAATTGACCGTGG",10,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","CCTAAATTGTGTTACT",8,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129W N157W",2
"lib1","SARS-CoV-2","CCTAACAAACTATGGT",6,40.35,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V77S F134Q",2
"lib1","SARS-CoV-2","CCTAACAAGACAAAAA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","A22S S69* F126E N151Q",4
"lib1","SARS-CoV-2","CCTAACAATGATCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A22*",1
"lib1","SARS-CoV-2","CCTAACACAAGATTTC",3,24.29,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","CCTAACAGGAGTTAAC",5,73.12,10.35,-0.42,0.04,2.9,1.03,0,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","CCTAACAGGGGTTCAG",1,29.97,10.86,0.1,0.1,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAACATAGCTGTGT",3,25.07,6.48,-4.29,0.48,1.5,1.12,0.02,">1 nonsynonymous","I2S K26W P96Y",3
"lib1","SARS-CoV-2","CCTAACCACAAGTAGG",1,0.83,NA,NA,NA,NA,NA,NA,"stop","L57* P161D L183N",3
"lib1","SARS-CoV-2","CCTAACCACCCTGCAA",7,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V V52A S147I",3
"lib1","SARS-CoV-2","CCTAACCATGCAGATC",4,35.21,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P96V I104V K132Y F156N Y165M",5
"lib1","SARS-CoV-2","CCTAACCGTTATCGCT",6,83.1,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9H T63D V77P K114A",4
"lib1","SARS-CoV-2","CCTAACCTAAAGCGGT",1,49.55,10.69,-0.08,0.07,2.95,1.01,0,">1 nonsynonymous","L5E D90M K132T",3
"lib1","SARS-CoV-2","CCTAACCTATTTCACT",6,124.9,9.77,-0.99,0.03,2.89,1.07,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","CCTAACCTCTACATAC",2,25.45,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","Y123L P149R Q176T",3
"lib1","SARS-CoV-2","CCTAACGAAAAATTCA",1,10.83,10.61,-0.15,0.07,2.91,1.04,0,">1 nonsynonymous","S36L D59K",2
"lib1","SARS-CoV-2","CCTAACGACAGATGGT",12,47.56,6.01,-4.76,0.99,1.5,1.21,0.02,">1 nonsynonymous","D68R G74T T85I G146V",4
"lib1","SARS-CoV-2","CCTAACGTGTCTTTCA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","K26* G83S W106E",3
"lib1","SARS-CoV-2","CCTAACGTTAAAAGAA",3,39.47,9.89,-0.88,0.09,2.72,1.08,0,">1 nonsynonymous","N13Q V37A A89P",3
"lib1","SARS-CoV-2","CCTAACTAAATGAACA",2,7.39,6,-4.76,0.84,3,1.21,0.01,">1 nonsynonymous","L60A G86R A190Y",3
"lib1","SARS-CoV-2","CCTAACTAGACGTCCA",1,34.56,10.73,-0.03,0.06,2.9,1.05,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","CCTAACTCGTATCACA",1,19.52,6,-4.76,1.74,3,1.11,0,">1 nonsynonymous","K94D R127Q",2
"lib1","SARS-CoV-2","CCTAACTCGTTACTTC",4,128.91,8.28,-2.48,0.14,2.31,1.07,0.01,">1 nonsynonymous","N30L G117R",2
"lib1","SARS-CoV-2","CCTAACTCTCTAGCAG",1,9.73,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","A33L N40S F44Y V180G",4
"lib1","SARS-CoV-2","CCTAACTGGCACTCTT",1,4.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CCTAAGAAAAATCTAT",5,60.33,10.81,0.05,0.06,2.95,1,0,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","CCTAAGAATGAACCAG",1,77.12,10.74,-0.03,0.08,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAAGAGAGTTAGAG",1,22.31,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","E10N Y39L D97N V103N",4
"lib1","SARS-CoV-2","CCTAAGATACATGTAA",3,63.43,10.78,0.02,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAAGATCCTCCAGG",5,73.57,10.18,-0.58,0.06,2.93,1.03,0,"1 nonsynonymous","A145C",1
"lib1","SARS-CoV-2","CCTAAGATGAGAGAAG",4,8.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F70L A145F G155V",3
"lib1","SARS-CoV-2","CCTAAGATGGGAAATT",4,54.86,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","F70W",1
"lib1","SARS-CoV-2","CCTAAGATTGTAAAAT",2,136.34,10.1,-0.66,0.11,2.54,1.03,0,">1 nonsynonymous","E10P Y178T",2
"lib1","SARS-CoV-2","CCTAAGCAACACAAAT",3,0.35,NA,NA,NA,NA,NA,NA,"stop","V32A K128* I138T C150W C158R F167P G174Y",7
"lib1","SARS-CoV-2","CCTAAGCCCGAAGGGC",11,95.2,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K87D Y93S P191N T201R",4
"lib1","SARS-CoV-2","CCTAAGCCTAAGAGTT",1,19.81,9.44,-1.32,0.17,2.03,1.15,0.02,">1 nonsynonymous","T15N P149A G152V",3
"lib1","SARS-CoV-2","CCTAAGCGATGTCACA",3,58.99,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48C R127V T140A",3
"lib1","SARS-CoV-2","CCTAAGCTTACACACA",7,80.77,6,-4.76,2,1.5,1.29,0.03,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","CCTAAGTCACACTGGC",2,0.6,NA,NA,NA,NA,NA,NA,"stop","D90S N107A R136E C158S T201*",5
"lib1","SARS-CoV-2","CCTAATAAAAAGCTAA",2,62.27,6,-4.76,2,3,1.2,0,">1 nonsynonymous","S41C C102Y N107M",3
"lib1","SARS-CoV-2","CCTAATAAAACAGATA",1,8.67,6,-4.76,2,3,1.11,0.03,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","CCTAATAAAATTCCAC",7,98.3,10.85,0.09,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTAATAAACCGAAAA",1,28.39,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C6P F12S Y175I T201V",4
"lib1","SARS-CoV-2","CCTAATAAACTGCTAT",3,37.66,6.09,-4.67,0.95,1.5,1.16,0.02,">1 nonsynonymous","P82L G86K N92W L111V T201V",5
"lib1","SARS-CoV-2","CCTAATAATCATAGAT",1,0.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102M",1
"lib1","SARS-CoV-2","CCTAATAATTTATCAC",1,30.98,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","S19L Y121D S129V F156H P161R Q168H",6
"lib1","SARS-CoV-2","CCTAATACACAGCTTA",2,9.29,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F70L V103W R136S",3
"lib1","SARS-CoV-2","CCTAATACATAGATAG",1,47.68,10.14,-0.62,0.05,2.87,1,0,">1 nonsynonymous","G9K C31F S41N",3
"lib1","SARS-CoV-2","CCTAATACGCTATTGC",4,88.56,8.41,-2.36,0.11,2.27,1.1,0,">1 nonsynonymous","A81T T85V Y119G",3
"lib1","SARS-CoV-2","CCTAATACGGACGCGT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V32E Q84V F99*",3
"lib1","SARS-CoV-2","CCTAATAGACCTAAAC",6,0.94,NA,NA,NA,NA,NA,NA,"stop","A22V G83S K94V I138*",4
"lib1","SARS-CoV-2","CCTAATATATAGACCT",3,21.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K87Y V103H Y121C N130R A192H",5
"lib1","SARS-CoV-2","CCTAATATGTCCCTCT",3,0,NA,NA,NA,NA,NA,NA,"stop","F62H P96T W106V K128P E154* G174*",6
"lib1","SARS-CoV-2","CCTAATATTACCAATA",6,48.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35G S69R I104S",3
"lib1","SARS-CoV-2","CCTAATATTCACCGAT",3,44.49,10.33,-0.43,0.03,2.96,1.06,0,"1 nonsynonymous","G174Q",1
"lib1","SARS-CoV-2","CCTAATCAAAAATAAA",3,24.72,10.22,-0.54,0.1,2.54,1.03,0.01,"1 nonsynonymous","A81D",1
"lib1","SARS-CoV-2","CCTAATCAAAATTCTC",1,23.57,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R25Q Y35P S45L G51S D97T Y121P",6
"lib1","SARS-CoV-2","CCTAATCAATATTGTA",1,43.84,6,-4.76,2,3,1.21,0,">1 nonsynonymous","G146L Q176S",2
"lib1","SARS-CoV-2","CCTAATCAATTGAGAC",4,8.19,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N30M C49R",2
"lib1","SARS-CoV-2","CCTAATCAGAGTACCA",4,73.15,8.22,-2.54,0.2,2.12,1.1,0.02,">1 nonsynonymous","S113M K128L",2
"lib1","SARS-CoV-2","CCTAATCAGCGGATCG",7,2.24,NA,NA,NA,NA,NA,NA,"stop","L5* G152V E154T",3
"lib1","SARS-CoV-2","CCTAATCATAAAAAAA",1,25,10.21,-0.56,0.1,2.83,1,0.01,">1 nonsynonymous","I2T G9R K94A",3
"lib1","SARS-CoV-2","CCTAATCCACTATTGG",8,7.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19R A42S W106F",3
"lib1","SARS-CoV-2","CCTAATCCCAAGCAGG",12,114.23,10.78,0.01,0.08,2.92,1.06,0,">1 nonsynonymous","S36G F160R",2
"lib1","SARS-CoV-2","CCTAATCCTCAGACAC",2,593.37,10.15,-0.61,0.04,2.71,1.02,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","CCTAATCTCAGACTCC",6,1.11,NA,NA,NA,NA,NA,NA,"stop","T15V R25* N118T V182*",4
"lib1","SARS-CoV-2","CCTAATCTTTTGAAAA",3,39.89,10.25,-0.51,0.08,2.81,1,0,">1 nonsynonymous","C6D C195S",2
"lib1","SARS-CoV-2","CCTAATCTTTTTGTAT",3,5.51,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","N1Q A14L V77T N92E S139T C150S P177G",7
"lib1","SARS-CoV-2","CCTAATGTAACACCTA",4,35.78,6.2,-4.56,1,1.5,1.13,0.04,">1 nonsynonymous","F47S S129T D137L",3
"lib1","SARS-CoV-2","CCTAATTAATCAACCC",1,0,NA,NA,NA,NA,NA,NA,"stop","C61W L95T S129*",3
"lib1","SARS-CoV-2","CCTAATTATATTAAGC",3,6.32,9.84,-0.92,0.25,2.79,1.12,0.02,">1 nonsynonymous","K94N E141R P149A",3
"lib1","SARS-CoV-2","CCTAATTCATAAAACG",4,103,10.85,0.08,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAATTCGGTTCCGT",4,36.15,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V11A D90I W106L R127I",4
"lib1","SARS-CoV-2","CCTAATTGCGCGACAT",7,96.37,10.62,-0.14,0.07,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTAATTGGCCAAATA",3,15.72,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6L K94T G146P",3
"lib1","SARS-CoV-2","CCTAATTTCAATTATG",2,0.24,NA,NA,NA,NA,NA,NA,"stop","T3S C61* P161L",3
"lib1","SARS-CoV-2","CCTAATTTTCGAATAA",4,60.95,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N1Q V71W S139K P197K",4
"lib1","SARS-CoV-2","CCTAATTTTTAAACAT",1,55.02,10.25,-0.52,0.05,2.91,1,0,">1 nonsynonymous","N4P N30T D98N",3
"lib1","SARS-CoV-2","CCTACAAAAGTGAGAT",5,0.2,NA,NA,NA,NA,NA,NA,"stop","N1* A18L A42T T170R Y175T",5
"lib1","SARS-CoV-2","CCTACAAAATACGCAA",1,40.84,9.95,-0.82,0.15,2.33,1.12,0.01,">1 nonsynonymous","S43L D59V S129F E141S",4
"lib1","SARS-CoV-2","CCTACAAATCGTAGAG",7,23.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P54S N64F L131R",3
"lib1","SARS-CoV-2","CCTACAACCTAACATT",3,9.9,8.34,-2.42,0.22,1.56,1.14,0.02,">1 nonsynonymous","N1G C49F C61S P149Q",4
"lib1","SARS-CoV-2","CCTACAAGCAAGATAT",2,14.23,6,-4.76,2,1.5,1.04,0.06,">1 nonsynonymous","F12V Y35D I88P S113P P169S",5
"lib1","SARS-CoV-2","CCTACAATAGAAGAAG",2,26.96,10.73,-0.04,0.06,2.97,1.01,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","CCTACAATTAACTATT",1,5.48,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","N4L C61R V77E Q79L T140R G146W",6
"lib1","SARS-CoV-2","CCTACACAAGAAATAA",5,29.99,10.69,-0.07,0.09,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTACACATTTCATCC",2,26.26,10.81,0.05,0.08,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTACACCATAAGAGT",7,33.36,8.16,-2.61,0.24,1.5,1.05,0.01,">1 nonsynonymous","T46L A105H P149R T201F",4
"lib1","SARS-CoV-2","CCTACACCCTGCCCCA",2,15.07,10.77,0.01,0.08,2.95,1,0,">1 nonsynonymous","R27L I138T",2
"lib1","SARS-CoV-2","CCTACACCCTGGACAA",1,11.1,6.08,-4.69,1.07,1.5,1.24,0.03,">1 nonsynonymous","D68V D97Q",2
"lib1","SARS-CoV-2","CCTACACCGACGACAT",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F V37T F44N T170S",4
"lib1","SARS-CoV-2","CCTACACGAGTACAGT",4,47.97,10.75,-0.01,0.05,2.95,1,0,">1 nonsynonymous","V65I Q144N",2
"lib1","SARS-CoV-2","CCTACACTAAAATGTA",3,7.04,10.58,-0.18,0.15,2.95,1,0.01,">1 nonsynonymous","E141F T148G",2
"lib1","SARS-CoV-2","CCTACAGCCAAGCGTT",12,1.56,NA,NA,NA,NA,NA,NA,"stop","N4L V77L D112* V173N T201M",5
"lib1","SARS-CoV-2","CCTACAGCGACTGAGC",5,59.95,10.54,-0.22,0.04,2.94,1.03,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","CCTACAGCGTGCTTCG",2,56.65,9.05,-1.71,0.06,2.82,1.05,0,"1 nonsynonymous","G117C",1
"lib1","SARS-CoV-2","CCTACAGGAAAAATCG",7,81.43,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","CCTACAGTAAAAGGTC",10,6.51,NA,NA,NA,NA,NA,NA,"stop","I2R D90S P149* F160L",4
"lib1","SARS-CoV-2","CCTACAGTACAACATA",5,108.5,10.1,-0.66,0.06,2.76,1,0,">1 nonsynonymous","P7S V37N D98L",3
"lib1","SARS-CoV-2","CCTACAGTAGAAAACC",1,25.85,9.97,-0.8,0.11,2.51,1.01,0.01,">1 nonsynonymous","N58M K128M E141L",3
"lib1","SARS-CoV-2","CCTACATAACTGATGA",13,240.77,10.46,-0.31,0.04,2.91,1.01,0,">1 nonsynonymous","G83Y A105S I142M",3
"lib1","SARS-CoV-2","CCTACATAATAGAATC",1,19.14,9.77,-0.99,0.16,1.92,1.25,0.01,">1 nonsynonymous","G83F K94S",2
"lib1","SARS-CoV-2","CCTACATAATTAACTA",8,96.25,10.29,-0.48,0.03,2.88,1.05,0,">1 nonsynonymous","P54V N130V I142P K198S",4
"lib1","SARS-CoV-2","CCTACATAGCGTTCGA",2,156.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35W A81R F134N Q176V",4
"lib1","SARS-CoV-2","CCTACATATGACCGAC",4,5.72,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","L95R S200R",2
"lib1","SARS-CoV-2","CCTACATGGATTAGTC",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I R124N K198P",3
"lib1","SARS-CoV-2","CCTACATGTTACAGTC",13,95.62,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","D90L Y121T R136K T170S",4
"lib1","SARS-CoV-2","CCTACATTTCATAGAT",4,75.49,9.7,-1.07,0.05,2.86,1.04,0,">1 nonsynonymous","D98E L122M P169E",3
"lib1","SARS-CoV-2","CCTACATTTTCTCCGT",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R T63F V115H D137A T201P",5
"lib1","SARS-CoV-2","CCTACCAAATCTTAAC",2,22.06,6,-4.76,2,1.5,1.3,0.07,">1 nonsynonymous","Y35S Y50N Y175M",3
"lib1","SARS-CoV-2","CCTACCAAGGCCTGCG",3,23.47,9.8,-0.96,0.15,2.05,1.05,0.01,">1 nonsynonymous","F8N A14V S43L",3
"lib1","SARS-CoV-2","CCTACCACGGATACGG",5,35.69,8.41,-2.35,0.42,1.5,1.2,0.08,">1 nonsynonymous","C31R Q84S L95S",3
"lib1","SARS-CoV-2","CCTACCATGCCTTAGA",5,24.9,6,-4.76,1.31,1.5,1.13,0.01,">1 nonsynonymous","N1M S45V G83A D137V",4
"lib1","SARS-CoV-2","CCTACCCAAAACTCAT",7,10.12,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9S K56R T63L W106L V182F P191I",6
"lib1","SARS-CoV-2","CCTACCCACAGAACCC",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y D90Q V103Q P149Q",4
"lib1","SARS-CoV-2","CCTACCGTTTGACCCA",3,13.58,10.02,-0.74,0.09,2.95,1,0.01,">1 nonsynonymous","S43R G83C P169M",3
"lib1","SARS-CoV-2","CCTACCTCTAAGTGAA",1,0.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71A",1
"lib1","SARS-CoV-2","CCTACCTTTTGAACAA",4,0.38,NA,NA,NA,NA,NA,NA,"stop","R27M N64D L95*",3
"lib1","SARS-CoV-2","CCTACGACGAAAAGCC",2,112.89,10.04,-0.72,0.06,2.77,1,0,">1 nonsynonymous","A14D P169S",2
"lib1","SARS-CoV-2","CCTACGATGCGACGAA",3,2.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","CCTACGCAACCCCTCC",2,0.34,NA,NA,NA,NA,NA,NA,"stop","S45* V180R",2
"lib1","SARS-CoV-2","CCTACGCCAAATCCAA",8,40.6,6.12,-4.65,0.99,1.5,1.14,0.03,">1 nonsynonymous","V11G L95K S129D",3
"lib1","SARS-CoV-2","CCTACGCCTAGACACG",3,31.52,9.55,-1.22,0.19,2.24,1.18,0.01,">1 nonsynonymous","I2M C31F D90K",3
"lib1","SARS-CoV-2","CCTACGCGCCCCGAGC",2,21.1,10.32,-0.45,0.13,2.69,1.07,0.01,">1 nonsynonymous","L60H I104C",2
"lib1","SARS-CoV-2","CCTACGCTCTACCAGA",2,19.67,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10N D98Y W106C N107S",4
"lib1","SARS-CoV-2","CCTACGCTTAAGCAAC",6,13.4,6.01,-4.75,1.44,1.5,1.17,0.06,">1 nonsynonymous","E141L V180K",2
"lib1","SARS-CoV-2","CCTACGGAATCTCTTA",10,60.57,6,-4.76,2,3,1.21,0,">1 nonsynonymous","C49T L95G G146P F156Q",4
"lib1","SARS-CoV-2","CCTACGGCGGCTCATG",7,63.83,8.5,-2.26,0.11,2.54,1.05,0,">1 nonsynonymous","N30R S41I N157S",3
"lib1","SARS-CoV-2","CCTACGTATAATATAT",1,2.66,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CCTACGTCAATATACG",10,76.58,10.21,-0.55,0.12,2.19,1,0.01,">1 nonsynonymous","K94S N120G",2
"lib1","SARS-CoV-2","CCTACGTCAATCGCCA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib1","SARS-CoV-2","CCTACGTCTAACATTT",2,55.32,9.94,-0.82,0.1,2.52,1.03,0.01,">1 nonsynonymous","A14M S41P",2
"lib1","SARS-CoV-2","CCTACGTGGTGAAGCA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68G",1
"lib1","SARS-CoV-2","CCTACGTTTCAGCAAT",8,115.91,6.38,-4.38,0.67,1.5,1.23,0.03,">1 nonsynonymous","R27W V37H K48R P133T S139I",5
"lib1","SARS-CoV-2","CCTACTACGAACCCAG",2,53.13,6,-4.76,1.72,1.5,1.28,0.03,">1 nonsynonymous","V32A I104M F167C",3
"lib1","SARS-CoV-2","CCTACTACGCGCTCTA",3,37.84,6,-4.76,2,1.5,1.36,0.02,">1 nonsynonymous","K94Q F99C Y121G",3
"lib1","SARS-CoV-2","CCTACTACTAAGGAAT",4,23.8,10.08,-0.68,0.09,2.6,1.04,0,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","CCTACTAGAAACAGAG",3,42.61,10.42,-0.34,0.05,2.93,1.04,0,">1 nonsynonymous","S129M G155S",2
"lib1","SARS-CoV-2","CCTACTATATAAATAC",7,111.13,10,-0.77,0.07,2.3,1.03,0,"1 nonsynonymous","V181M",1
"lib1","SARS-CoV-2","CCTACTATGGCCTTGG",4,32.87,6,-4.76,1.77,3,1.24,0.01,">1 nonsynonymous","D137C G152K V180K S200L",4
"lib1","SARS-CoV-2","CCTACTCCATCGGCCA",1,3.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","CCTACTCGGACGAACG",28,236.1,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2N Y35K V103R N107E A190S",5
"lib1","SARS-CoV-2","CCTACTCTACGAAACG",1,62.69,10.79,0.03,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTACTCTATGTTATC",6,34.94,10.14,-0.63,0.1,2.68,1,0,">1 nonsynonymous","C6V F134W",2
"lib1","SARS-CoV-2","CCTACTGGAATCGCTT",1,12.95,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","L5S F17S S43L Y50P I104K Y119M R179N",7
"lib1","SARS-CoV-2","CCTACTGGACTTCTTA",5,59.28,10.85,0.09,0.07,2.91,1.04,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","CCTACTGGTTCTAACC",1,34.46,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A14C L57F N92S",3
"lib1","SARS-CoV-2","CCTACTTCACCTTTGT",5,36.14,6,-4.76,1.68,1.5,1.16,0.01,">1 nonsynonymous","G86L F99S Q144K",3
"lib1","SARS-CoV-2","CCTACTTGAATTTCGG",3,73.77,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y159P Y165D",2
"lib1","SARS-CoV-2","CCTACTTGCCCTTGTA",8,15.56,10.73,-0.03,0.08,2.96,1,0,">1 nonsynonymous","P54S I104M",2
"lib1","SARS-CoV-2","CCTACTTTAAATCTTG",12,242.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43V F134T P177Q",3
"lib1","SARS-CoV-2","CCTACTTTTAGCACCA",6,28.18,6.07,-4.69,1.24,1.5,1.23,0.05,">1 nonsynonymous","C49A R73V P149L",3
"lib1","SARS-CoV-2","CCTAGAAACTGACGGA",1,70.32,10.25,-0.51,0.06,2.85,1,0,">1 nonsynonymous","N13K N110V V153M",3
"lib1","SARS-CoV-2","CCTAGAAATTAAGTCT",2,58.84,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","W106F G152I L162T",3
"lib1","SARS-CoV-2","CCTAGAACTTTAATAA",1,22.03,6.26,-4.51,0.7,1.5,1.22,0.03,">1 nonsynonymous","W23N Y35P K56L K87V K128Y P149W",6
"lib1","SARS-CoV-2","CCTAGAAGACATCCTC",4,134.52,10.6,-0.17,0.03,2.91,1.03,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","CCTAGAAGAGTGAATC",5,48.29,10.56,-0.2,0.06,2.91,1.04,0,">1 nonsynonymous","F44Y C61T K128S",3
"lib1","SARS-CoV-2","CCTAGAATAGCTCTGC",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q S53F N107K L183P",4
"lib1","SARS-CoV-2","CCTAGAATCATTAGTA",3,96.44,6,-4.76,1.49,1.5,1.19,0.01,">1 nonsynonymous","Y35R A42Y V71R N120I Q163M",5
"lib1","SARS-CoV-2","CCTAGACAAGCATAAA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","T148* G196F",2
"lib1","SARS-CoV-2","CCTAGACAGATGATAA",2,51.53,9.13,-1.63,0.14,1.6,1.09,0.01,">1 nonsynonymous","N58E G83L T140L Y178S",4
"lib1","SARS-CoV-2","CCTAGACTTAACTATA",6,183.33,10.77,0.01,0.06,2.92,1.05,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","CCTAGACTTGAGCCGT",2,31.47,10.02,-0.74,0.13,2.15,1.06,0.01,">1 nonsynonymous","F99Y K132I",2
"lib1","SARS-CoV-2","CCTAGAGAGTACCCTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","F8* R27H P96S Y119A",4
"lib1","SARS-CoV-2","CCTAGAGGAGTATTAC",4,40.8,9.85,-0.92,0.12,1.89,1.04,0.01,">1 nonsynonymous","I2L V11T N40H I104V",4
"lib1","SARS-CoV-2","CCTAGAGGTCCGCTAA",2,26.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29Y N40F N92R K128I",4
"lib1","SARS-CoV-2","CCTAGAGTGCTTGAAA",12,119.17,6.01,-4.76,0.93,1.5,1.18,0.01,">1 nonsynonymous","F12L N30G A105L",3
"lib1","SARS-CoV-2","CCTAGATTACAAGAAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","P7V R27* S29G I104* I142H Y159D",6
"lib1","SARS-CoV-2","CCTAGATTTTTATCAA",1,26.28,6.26,-4.5,0.94,1.5,1.21,0.06,">1 nonsynonymous","F8Y S36G F47C G146K",4
"lib1","SARS-CoV-2","CCTAGCAAGACAATAT",3,48.33,10.89,0.13,0.18,2.82,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTAGCAAGTATAACT",19,56.4,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F99G S113F N118V G174A",4
"lib1","SARS-CoV-2","CCTAGCACGCACAACG",2,45.16,9.7,-1.06,0.12,2.01,1.03,0.01,">1 nonsynonymous","I28G S41R P149T",3
"lib1","SARS-CoV-2","CCTAGCAGAACTGACT",4,69.39,7.07,-3.7,0.33,1.5,1.1,0.02,">1 nonsynonymous","A14K L38S Y91R",3
"lib1","SARS-CoV-2","CCTAGCAGCCGTAGTC",1,25.01,10.68,-0.08,0.09,2.83,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAGCCACCTAAATC",3,79.29,10.78,0.02,0.04,2.96,1,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","CCTAGCCCTACTTTGA",4,0.63,NA,NA,NA,NA,NA,NA,"stop","Y35G C61* V77Y T85V G146A P169C",6
"lib1","SARS-CoV-2","CCTAGCCGCAACGACT",3,0.49,NA,NA,NA,NA,NA,NA,"stop","L5P F47L K56V A89* A105N",5
"lib1","SARS-CoV-2","CCTAGCCTACATCCTT",6,70.61,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D98F T170S Y175D",3
"lib1","SARS-CoV-2","CCTAGCGAACATAGGT",1,28.63,8.78,-1.99,0.04,2.93,1.07,0,">1 nonsynonymous","V32T T170V A190S",3
"lib1","SARS-CoV-2","CCTAGCGAAGCTACGC",3,43.21,6,-4.76,1.66,1.5,1.19,0.03,">1 nonsynonymous","N4M P82V Y119H P169V",4
"lib1","SARS-CoV-2","CCTAGCGTAAAGCACT",3,1.03,NA,NA,NA,NA,NA,NA,"stop","T63L K87* R136Y S147C",4
"lib1","SARS-CoV-2","CCTAGCTCTTAGAATA",4,58.02,6.96,-3.81,0.35,1.5,1.12,0.03,">1 nonsynonymous","C6Q N58S I104H I138L",4
"lib1","SARS-CoV-2","CCTAGGAAGGTATCAG",6,63.66,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N1E L60T P82Y K94Y G116W",5
"lib1","SARS-CoV-2","CCTAGGACCAAATAGA",4,0.82,NA,NA,NA,NA,NA,NA,"stop","F17Y R127G L183*",3
"lib1","SARS-CoV-2","CCTAGGAGAGTGACGA",2,38.52,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S53I L162K Q176L",3
"lib1","SARS-CoV-2","CCTAGGAGGCCAGGCA",5,57.21,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68E C150D T201N",3
"lib1","SARS-CoV-2","CCTAGGATATATGCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L T100P R127P I142S P161Q",5
"lib1","SARS-CoV-2","CCTAGGCAACTACACG",1,10.36,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S19P G51F D90I Y119L T201F",5
"lib1","SARS-CoV-2","CCTAGGCCAATCGTCA",2,39.81,10.52,-0.25,0.06,2.85,1.11,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","CCTAGGGGTGTACTAA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","S29Y S36C A42V G51S A89T N107T N120* G166V",8
"lib1","SARS-CoV-2","CCTAGGGTTAAAATAA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","S19* R127A",2
"lib1","SARS-CoV-2","CCTAGGGTTCTAGGAT",4,27.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12K W23C F44K N58A N120Q",5
"lib1","SARS-CoV-2","CCTAGGTACCATTATA",3,25.16,10.18,-0.59,0.11,2.8,1.03,0.01,">1 nonsynonymous","L5W T85G F156S",3
"lib1","SARS-CoV-2","CCTAGGTAGAAGGTGC",2,3.7,NA,NA,NA,NA,NA,NA,"stop","T3L R25*",2
"lib1","SARS-CoV-2","CCTAGGTCAACGCGGA",1,14.2,10.81,0.04,0.07,2.91,1.1,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","CCTAGGTGAGCATCCC",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V V77G R179W",3
"lib1","SARS-CoV-2","CCTAGGTTAATACGAG",1,1.92,NA,NA,NA,NA,NA,NA,"stop","I2* A42L A89C V115N",4
"lib1","SARS-CoV-2","CCTAGTAACGTATATG",3,33.98,10.01,-0.76,0.14,2.16,1.03,0.01,">1 nonsynonymous","V37R S139F P149N",3
"lib1","SARS-CoV-2","CCTAGTAATATAGCAA",2,122.3,10.78,0.01,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTAGTCAATTCTGAA",3,14.97,10.73,-0.03,0.05,2.93,1,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","CCTAGTCCCGAAATAT",3,48.38,8.59,-2.18,0.18,1.59,1.18,0.02,">1 nonsynonymous","V11H A33C F160C",3
"lib1","SARS-CoV-2","CCTAGTCCTGAAAAGA",3,76.95,10.55,-0.21,0.03,2.9,1.04,0,">1 nonsynonymous","Y66L G116N",2
"lib1","SARS-CoV-2","CCTAGTGCAAAAACCC",3,32.54,10.22,-0.55,0.2,2.41,1.06,0.02,">1 nonsynonymous","T55M E154C",2
"lib1","SARS-CoV-2","CCTAGTGGGTTGGATG",1,6.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V Y165C",2
"lib1","SARS-CoV-2","CCTAGTTAAATCCGAA",2,4.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38H",1
"lib1","SARS-CoV-2","CCTAGTTAAGCCCTGT",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F8N G116* E135K",3
"lib1","SARS-CoV-2","CCTAGTTCATATAATT",4,32.13,10.91,0.15,0.05,2.92,1.03,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","CCTAGTTCCTATGGGG",6,16.63,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","T3W A18L L38T L183V",4
"lib1","SARS-CoV-2","CCTAGTTGCAACTATA",1,13.92,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","Y66Q R136D",2
"lib1","SARS-CoV-2","CCTAGTTGTAGGCAGG",2,0.9,NA,NA,NA,NA,NA,NA,"stop","L60* K87H R136M",3
"lib1","SARS-CoV-2","CCTAGTTGTTATGTGA",1,46.99,9.95,-0.81,0.1,2.82,1.05,0,">1 nonsynonymous","L60H T170K",2
"lib1","SARS-CoV-2","CCTAGTTGTTGGAAAT",1,22.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60P G101D S129V E141F E154I",5
"lib1","SARS-CoV-2","CCTAGTTTTTACCTGC",6,60.13,6.22,-4.54,0.8,1.5,1.25,0.02,">1 nonsynonymous","A33G I88W",2
"lib1","SARS-CoV-2","CCTATAAAACCAACCT",1,46.07,10.57,-0.19,0.08,2.84,1.11,0,">1 nonsynonymous","N4R W23F T201H",3
"lib1","SARS-CoV-2","CCTATAAACGGAAATT",1,13.18,9.81,-0.95,0.31,1.54,1.06,0.04,">1 nonsynonymous","P82S N120E",2
"lib1","SARS-CoV-2","CCTATAAACTAGCTGG",3,51.49,8.49,-2.28,0.37,1.5,1,0.06,">1 nonsynonymous","F12R T85G I104L Y119R",4
"lib1","SARS-CoV-2","CCTATAACAAATGATA",3,27.58,10.37,-0.4,0.09,2.75,1.08,0,">1 nonsynonymous","L5E P169M",2
"lib1","SARS-CoV-2","CCTATAACAACGTGCA",3,18.32,6.91,-3.86,0.33,1.5,1,0.02,">1 nonsynonymous","F12C F134E",2
"lib1","SARS-CoV-2","CCTATAACCATTTACT",7,26.48,7.31,-3.45,0.28,1.5,1,0.03,">1 nonsynonymous","I88M W106R K198S",3
"lib1","SARS-CoV-2","CCTATAACCCCCGACG",2,8.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G86A D97A I104S F156R L188H",5
"lib1","SARS-CoV-2","CCTATAACTAGCTGAC",5,68.39,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C61F S129V C158E",3
"lib1","SARS-CoV-2","CCTATAAGCCTAATTC",3,9.78,10.74,-0.03,0.42,1.5,1,0.07,">1 nonsynonymous","Y50R K128N",2
"lib1","SARS-CoV-2","CCTATAAGTATATTCA",4,23.15,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I80E A89I",2
"lib1","SARS-CoV-2","CCTATAATTATACTTG",3,20.96,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y39P L57N D90S D97L L162V F185S",6
"lib1","SARS-CoV-2","CCTATAATTCCAGTCG",7,0.97,NA,NA,NA,NA,NA,NA,"stop","I88D Y123T K128A Y143I G166*",5
"lib1","SARS-CoV-2","CCTATACAACGGGCCT",2,14.16,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N13S V32L Y35N D68L K87L G116R Q163G T170L Q176I",9
"lib1","SARS-CoV-2","CCTATACAATACAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12C I88* L131P T140V P161Q",5
"lib1","SARS-CoV-2","CCTATACACTTTGTCT",4,14.14,6.15,-4.62,1.49,1.5,1.27,0.08,">1 nonsynonymous","C6R S53L Y121G N151D F167W",5
"lib1","SARS-CoV-2","CCTATACGCAACGATC",10,157.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10V D59M R78L G83E W106C Y175C V194I",7
"lib1","SARS-CoV-2","CCTATACTGGCCGGAT",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L V103F",2
"lib1","SARS-CoV-2","CCTATAGACTAGTACT",1,8.83,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37M C61D D112Q V181E K198R",5
"lib1","SARS-CoV-2","CCTATATAAATAACCA",3,12.49,6.02,-4.74,2,3,1.16,0.01,">1 nonsynonymous","T15P R27D K87S P96F F134C",5
"lib1","SARS-CoV-2","CCTATATAAGGTATCT",3,8.05,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N64C D68T W106G",3
"lib1","SARS-CoV-2","CCTATATCACCAATGC",6,69.2,10.33,-0.44,0.04,2.84,1.07,0,">1 nonsynonymous","E10S S139Q E154S",3
"lib1","SARS-CoV-2","CCTATATGATAGCGAG",4,2.46,NA,NA,NA,NA,NA,NA,"stop","A105* L162N",2
"lib1","SARS-CoV-2","CCTATCAATAGATAAA",4,12.72,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","T3R T63D D90F R136A",4
"lib1","SARS-CoV-2","CCTATCACAGTTGATG",1,1.47,NA,NA,NA,NA,NA,NA,"stop","Y35S F62R I80M T100W G116* T170L",6
"lib1","SARS-CoV-2","CCTATCACCAAGTACG",5,0.55,NA,NA,NA,NA,NA,NA,"stop","C150W G155*",2
"lib1","SARS-CoV-2","CCTATCAGTTCGCCCA",4,38.71,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10Q N24H L60I G101Y",4
"lib1","SARS-CoV-2","CCTATCAGTTCGCTAT",1,9.24,10.29,-0.48,0.22,2.67,1.32,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTATCATAAACAAAT",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V P149M V182C",3
"lib1","SARS-CoV-2","CCTATCCAACTTCGTT",5,21.3,6.05,-4.72,0.89,1.5,1.2,0.02,">1 nonsynonymous","G9T I88W",2
"lib1","SARS-CoV-2","CCTATCCAATGAGCAT",12,374.12,9.18,-1.58,0.06,2.84,1.1,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","CCTATCCATACCGGTT",1,16.95,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","E10I G86S D98A R124A P149R N157M Y165H A192T S200R",9
"lib1","SARS-CoV-2","CCTATCCGTTGATCAT",2,132.35,10.75,-0.02,0.03,2.95,1.01,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","CCTATCCTCTCTGATC",4,52.71,10.31,-0.46,0.07,2.75,1,0,">1 nonsynonymous","N4M S129L",2
"lib1","SARS-CoV-2","CCTATCCTGAGAGAAA",8,1.56,NA,NA,NA,NA,NA,NA,"stop","Y39S D90* D98A D112* Y121L",5
"lib1","SARS-CoV-2","CCTATCGGTTACAAGG",3,60.08,10.44,-0.32,0.05,2.89,1.05,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","CCTATCGTTACATATC",1,62.53,10.43,-0.34,0.06,2.91,1.04,0,"1 nonsynonymous","N118E",1
"lib1","SARS-CoV-2","CCTATCTCCAGGTAGG",2,10.16,8.33,-2.44,0.43,1.5,1,0.08,">1 nonsynonymous","A33R G86D L95A N107F",4
"lib1","SARS-CoV-2","CCTATCTTATTAGACG",1,57.53,9.75,-1.01,0.07,2.78,1.05,0,">1 nonsynonymous","P54R S129D Y165H T201Y",4
"lib1","SARS-CoV-2","CCTATCTTGTAATCTT",2,30.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12D G51V N64Q D75I D98H R127L T201F",7
"lib1","SARS-CoV-2","CCTATGAAAGTTACGT",2,58.79,10.86,0.09,0.09,2.9,1.06,0,">1 nonsynonymous","K26T V173M T201M",3
"lib1","SARS-CoV-2","CCTATGAAGCTGTAAG",1,11.35,6.97,-3.79,0.44,1.78,1.29,0.03,">1 nonsynonymous","N13L R16T S43A D98G N118A",5
"lib1","SARS-CoV-2","CCTATGAATATACAGT",8,28.54,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C6S S29G L38H P96L N118F P133F",6
"lib1","SARS-CoV-2","CCTATGACTATAGATG",7,44.65,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","F167Q",1
"lib1","SARS-CoV-2","CCTATGACTCAATCAT",2,20.4,8.56,-2.2,0.25,1.63,1.25,0.03,">1 nonsynonymous","N13R S45K R73Q",3
"lib1","SARS-CoV-2","CCTATGAGCGAGGTGA",4,293.66,10.73,-0.04,0.07,2.94,1.03,0,"1 nonsynonymous","G152D",1
"lib1","SARS-CoV-2","CCTATGCCCGCTCCGT",3,42.12,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K128P D137G S139R",3
"lib1","SARS-CoV-2","CCTATGCCCGTACCAG",4,23.61,8.23,-2.53,0.42,1.5,1,0.06,">1 nonsynonymous","A33L Y50K L57G",3
"lib1","SARS-CoV-2","CCTATGCCGAGCACTT",5,136.99,8.26,-2.51,0.13,2.81,1.05,0.01,"1 nonsynonymous","Y175A",1
"lib1","SARS-CoV-2","CCTATGCCTGGCCTTC",2,12.62,10.36,-0.4,0.2,2.61,1,0.01,"1 nonsynonymous","Y123T",1
"lib1","SARS-CoV-2","CCTATGCGCAATGAAG",1,59.66,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N151S C158F G172F",3
"lib1","SARS-CoV-2","CCTATGCTATCATTCA",6,2.13,NA,NA,NA,NA,NA,NA,"stop","G196*",1
"lib1","SARS-CoV-2","CCTATGGGAATTTTAT",2,24.61,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G86V T148S",2
"lib1","SARS-CoV-2","CCTATGTCGCATTAGT",3,80.93,10.72,-0.04,0.08,2.88,1.08,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","CCTATGTTACCTGCCG",4,21.98,8.07,-2.69,0.44,1.5,1,0.07,">1 nonsynonymous","C6M G86S G101E G117S K199V",5
"lib1","SARS-CoV-2","CCTATTAACAAATTGG",2,28.07,10.35,-0.41,0.08,2.87,1.06,0,">1 nonsynonymous","D90Y T148H",2
"lib1","SARS-CoV-2","CCTATTAACTGACTAG",2,14.71,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10C F17D L57G G116S S164P G166W P191T",7
"lib1","SARS-CoV-2","CCTATTAATGACATTA",1,23.41,6,-4.76,2,3,1.05,0,">1 nonsynonymous","G9W T15S G86R L122E",4
"lib1","SARS-CoV-2","CCTATTACACCTCGTG",2,33.35,10.72,-0.05,0.04,2.91,1.03,0,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","CCTATTACGACATCTT",12,198.08,9.16,-1.6,0.05,2.83,1.09,0,">1 nonsynonymous","F44D Y119G",2
"lib1","SARS-CoV-2","CCTATTAGAAATAGCT",1,31.19,8.87,-1.89,0.15,2.29,1.23,0.01,">1 nonsynonymous","N30E Q84Y G174M",3
"lib1","SARS-CoV-2","CCTATTAGTAACGCGC",1,14.53,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","G101I Y159D",2
"lib1","SARS-CoV-2","CCTATTAGTTTCTTTA",5,42.47,6.08,-4.68,0.75,1.5,1.18,0.01,">1 nonsynonymous","I104D R124H",2
"lib1","SARS-CoV-2","CCTATTCAGCACGTGC",3,12.5,10.56,-0.21,0.1,2.88,1.07,0.01,">1 nonsynonymous","K56S K199Q",2
"lib1","SARS-CoV-2","CCTATTCCGTAAAAAA",1,17.53,9.03,-1.73,0.13,2.7,1.19,0.01,">1 nonsynonymous","G117M Q168S",2
"lib1","SARS-CoV-2","CCTATTCTCCGGAATT",2,89.01,10.83,0.07,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTATTCTGTAATCTT",2,17.23,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","L60T G74Q G86E F167T P197V",5
"lib1","SARS-CoV-2","CCTATTCTTTCTGACG",8,133.33,10.61,-0.15,0.04,2.88,1.04,0,">1 nonsynonymous","S41I L122V",2
"lib1","SARS-CoV-2","CCTATTGATATACTAA",8,124.69,8.29,-2.48,0.23,1.5,1.09,0.02,">1 nonsynonymous","V11R G155M",2
"lib1","SARS-CoV-2","CCTATTGTAGCGAACC",4,94.94,10.66,-0.1,0.05,2.99,1,0,"1 nonsynonymous","T148W",1
"lib1","SARS-CoV-2","CCTATTGTTCACCTAA",4,87.54,10.64,-0.12,0.08,2.8,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTATTTATCCCCAAC",5,88.71,9.56,-1.2,0.12,1.88,1.1,0.01,">1 nonsynonymous","V11D W23P P197L",3
"lib1","SARS-CoV-2","CCTATTTCAATTACAG",1,27.62,7.82,-2.95,0.33,1.5,1.26,0.04,">1 nonsynonymous","N13I G83S",2
"lib1","SARS-CoV-2","CCTATTTGGTATAAAT",12,4.76,NA,NA,NA,NA,NA,NA,"stop","R124C E154F T201*",3
"lib1","SARS-CoV-2","CCTATTTTCCCGGGGC",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W G101S G146A A190H",4
"lib1","SARS-CoV-2","CCTCAAAAAAAGGATC",5,32.18,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F8D S19V T100S W106T D137I G174R",6
"lib1","SARS-CoV-2","CCTCAAAAAGAAGTCA",9,163.24,10.21,-0.56,0.04,2.94,1.02,0,"1 nonsynonymous","Q163E",1
"lib1","SARS-CoV-2","CCTCAAAACAACAAAA",3,38.26,10.61,-0.16,0.08,2.9,1.05,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","CCTCAAAACCAGAAAC",10,109.52,6.17,-4.6,0.45,1.5,1.17,0.01,">1 nonsynonymous","N58C R127L T148N P197S",4
"lib1","SARS-CoV-2","CCTCAAAAGCGGGAAC",4,0.44,NA,NA,NA,NA,NA,NA,"stop","G101* A190C",2
"lib1","SARS-CoV-2","CCTCAAAAGTGCCCAA",1,7.73,10.11,-0.65,0.08,2.96,1,0,">1 nonsynonymous","C6S C61M",2
"lib1","SARS-CoV-2","CCTCAAAATTTTTGCA",3,7.47,7.02,-3.74,0.56,1.53,1.04,0.06,">1 nonsynonymous","T15I L131R G146V",3
"lib1","SARS-CoV-2","CCTCAAACTATGTGAG",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R A14F F47R S129Y Y175L S184Y",6
"lib1","SARS-CoV-2","CCTCAAACTGGCGGCC",12,115.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5N P82M E141T G146N",4
"lib1","SARS-CoV-2","CCTCAAAGAGTTTCCG",1,35.19,10.76,-0.01,0.06,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCAAAGGAGCCAAA",1,6.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10A F167P",2
"lib1","SARS-CoV-2","CCTCAAATTAATCTTG",4,27.65,8.84,-1.93,0.22,1.61,1.24,0.02,">1 nonsynonymous","L5T Y21C N40G T46I",4
"lib1","SARS-CoV-2","CCTCAACCCAAATATG",14,251.2,10.09,-0.68,0.05,2.59,1.02,0,">1 nonsynonymous","P7Y L60R S147Y T201G",4
"lib1","SARS-CoV-2","CCTCAACCGATTTTGA",4,52.36,6.01,-4.75,0.58,1.5,1.12,0.01,">1 nonsynonymous","P54Y S139L C150Y S184Y",4
"lib1","SARS-CoV-2","CCTCAACTGTTAGAAC",3,15.23,6,-4.76,2,1.5,1.35,0.08,">1 nonsynonymous","Y21H K87S I138T L162R F167L",5
"lib1","SARS-CoV-2","CCTCAACTTCGTAAAC",5,96.69,10.74,-0.03,0.04,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTCAAGATAGAACAT",2,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D P96R T140L G174S",4
"lib1","SARS-CoV-2","CCTCAAGCCGCAACCT",7,60.58,6.23,-4.54,0.53,1.5,1.15,0.01,">1 nonsynonymous","G74T T148C",2
"lib1","SARS-CoV-2","CCTCAAGTCCTATGTC",10,1,NA,NA,NA,NA,NA,NA,"stop","G9R D34* A105W",3
"lib1","SARS-CoV-2","CCTCAAGTGTGACCAT",12,176,10.72,-0.05,0.06,2.84,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTCAAGTTGAATATC",8,50.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A67F N107S G117S F134C T201S",5
"lib1","SARS-CoV-2","CCTCAAGTTGATAGAT",2,35.79,9.95,-0.81,0.07,2.76,1.04,0,"1 nonsynonymous","C6Y",1
"lib1","SARS-CoV-2","CCTCAATTATTGTGAC",2,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L D90V R136A",3
"lib1","SARS-CoV-2","CCTCACAAGATAGGTG",1,39.45,10.59,-0.17,0.06,2.98,1.01,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","CCTCACAATGACTTAT",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y K132P F160C Q168R",4
"lib1","SARS-CoV-2","CCTCACAGGCTTTTGA",7,5.92,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","CCTCACATCTCTAAAG",11,101.01,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E76L A145D",2
"lib1","SARS-CoV-2","CCTCACGAAACCCCAT",3,101.17,10.67,-0.09,0.04,2.9,1.04,0,"1 nonsynonymous","F160E",1
"lib1","SARS-CoV-2","CCTCACGACAAATTTA",11,0.73,NA,NA,NA,NA,NA,NA,"stop","G83T I88* Y119T N151I S164T",5
"lib1","SARS-CoV-2","CCTCACGCTTATGCGT",6,80.38,7.61,-3.15,0.16,1.5,1.07,0.01,">1 nonsynonymous","V11D S29P N118V",3
"lib1","SARS-CoV-2","CCTCACGGGAGATTCA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","N40* R127D G155C",3
"lib1","SARS-CoV-2","CCTCACTACCAAGGAA",3,4.29,NA,NA,NA,NA,NA,NA,"stop","S36* L60T",2
"lib1","SARS-CoV-2","CCTCACTCAAGTAGAG",1,0.34,NA,NA,NA,NA,NA,NA,"stop","T100S Y119*",2
"lib1","SARS-CoV-2","CCTCACTCACAGTAGC",1,0.85,NA,NA,NA,NA,NA,NA,"stop","G9L Q84* E135D Y165D",4
"lib1","SARS-CoV-2","CCTCAGAAAATCCCCA",1,12.78,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R25Y L60T V77S I88S Q163P",5
"lib1","SARS-CoV-2","CCTCAGATCAGCAAAA",2,27.22,10.21,-0.56,0.08,2.91,1,0,">1 nonsynonymous","A33I P149W",2
"lib1","SARS-CoV-2","CCTCAGCCACCACATA",4,142.14,7.42,-3.34,0.23,1.5,1.11,0.01,">1 nonsynonymous","I2C N118M G146E",3
"lib1","SARS-CoV-2","CCTCAGGGGACCCTCC",1,28.16,10.6,-0.17,0.1,2.8,1.1,0.01,">1 nonsynonymous","T46D S139T",2
"lib1","SARS-CoV-2","CCTCAGTAAAATATGT",4,0.97,NA,NA,NA,NA,NA,NA,"stop","N24P S36R V103A R124*",4
"lib1","SARS-CoV-2","CCTCAGTAGCCGCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F I80H T201Y",3
"lib1","SARS-CoV-2","CCTCAGTCTCAAGTTT",2,27.8,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","S36N F44I V77N",3
"lib1","SARS-CoV-2","CCTCAGTCTTTCCGGC",11,149.46,9.55,-1.21,0.15,1.8,1.11,0.01,">1 nonsynonymous","I2S P7L V52S T148M",4
"lib1","SARS-CoV-2","CCTCATAACGACCTAC",8,82.57,9.3,-1.46,0.16,1.59,1.13,0.01,">1 nonsynonymous","S19L V153Q T201A",3
"lib1","SARS-CoV-2","CCTCATAAGAGGGGTG",5,58.47,8.42,-2.35,0.22,1.5,1.12,0.02,">1 nonsynonymous","R16H C49S T55I",3
"lib1","SARS-CoV-2","CCTCATACAATAGCAA",5,618.78,10.83,0.07,0.05,2.96,1.02,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","CCTCATATCAAGAAAT",7,225.83,8.82,-1.94,0.06,2.64,1.04,0,">1 nonsynonymous","S45G Y119T I138R",3
"lib1","SARS-CoV-2","CCTCATATGAGGATAT",3,51.93,10.13,-0.64,0.11,2.67,1.02,0.01,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","CCTCATATTCACCGAG",2,60.86,7.81,-2.96,0.26,1.5,1.07,0.02,">1 nonsynonymous","Y91T G174Y",2
"lib1","SARS-CoV-2","CCTCATCACGTACATT",11,24.07,NA,NA,NA,NA,NA,NA,"stop","G86D F126*",2
"lib1","SARS-CoV-2","CCTCATCATAACAGCC",2,2.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72Q",1
"lib1","SARS-CoV-2","CCTCATCATCGCCTAA",7,8.86,6,-4.76,1.91,3,1.15,0.01,">1 nonsynonymous","E10G V103T Q144S V181M E186I",5
"lib1","SARS-CoV-2","CCTCATCCGTATTGAA",5,42.08,10.77,0.01,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCATCGGAAACGTG",2,28.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55H R124D T140G",3
"lib1","SARS-CoV-2","CCTCATGAAAGTCCCC",2,12.35,7.57,-3.19,0.13,1.81,1.09,0.01,">1 nonsynonymous","R73Y D90R",2
"lib1","SARS-CoV-2","CCTCATGAATAGATAT",2,49.43,10.78,0.02,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCATGGATCGTACG",1,7.19,6,-4.76,2,3,1.11,0,">1 nonsynonymous","C49G A81W",2
"lib1","SARS-CoV-2","CCTCATGTCCATTGTA",4,55.9,10.91,0.15,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCATTACAGGGGAG",6,55.41,6,-4.76,1.74,1.5,1.16,0.01,">1 nonsynonymous","N107Y N120C E135G G155V",4
"lib1","SARS-CoV-2","CCTCATTAGCGAGCTA",4,14.17,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","CCTCCAACCCACAATG",4,35.72,6.18,-4.59,0.76,1.5,1.23,0.02,">1 nonsynonymous","K56V S69M I88V P149W",4
"lib1","SARS-CoV-2","CCTCCAACCTTCTACC",3,106.71,10.53,-0.23,0.04,2.96,1.02,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","CCTCCAACTTGGAAAA",3,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V Q168S",2
"lib1","SARS-CoV-2","CCTCCAATGGGTGAAA",2,1.37,NA,NA,NA,NA,NA,NA,"stop","R27L K48S K56* K114R R136M",5
"lib1","SARS-CoV-2","CCTCCACAAACTTAAA",6,71.99,6.22,-4.55,0.93,1.5,1.25,0.03,">1 nonsynonymous","C49G L57Q",2
"lib1","SARS-CoV-2","CCTCCACAACTAACCA",4,60.82,10.76,-0.01,0.09,2.9,1.05,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","CCTCCACCACCTTACA",2,10.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81M G101C Y119F K199T",4
"lib1","SARS-CoV-2","CCTCCACCCAATATCG",5,46.25,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28T F44C P54G P96Y F156R",5
"lib1","SARS-CoV-2","CCTCCACGCCCCCTGG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T W106Q G117C S139I",4
"lib1","SARS-CoV-2","CCTCCAGCGCGGACAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","A89* A105V",2
"lib1","SARS-CoV-2","CCTCCAGCTCCAAGGA",5,37.04,10.93,0.16,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCCAGGCTTTCGAA",4,83.66,10.74,-0.02,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCCATCTACAAAAA",2,50.87,7.93,-2.83,0.23,1.67,1.17,0.01,">1 nonsynonymous","L5Y D137E V173P",3
"lib1","SARS-CoV-2","CCTCCATTGTTTCCAA",4,64.75,6.77,-3.99,0.25,1.78,1.21,0.01,">1 nonsynonymous","C158A N171S",2
"lib1","SARS-CoV-2","CCTCCCACAGTAAGAC",3,6.37,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","Y159V F167L",2
"lib1","SARS-CoV-2","CCTCCCATAGCCATCC",4,65.9,10.66,-0.1,0.05,2.92,1.01,0,">1 nonsynonymous","F47Y T201I",2
"lib1","SARS-CoV-2","CCTCCCCGACGACCCC",1,52.25,10.59,-0.17,0.06,2.95,1.03,0,">1 nonsynonymous","S139K V173N",2
"lib1","SARS-CoV-2","CCTCCCCTACTCGTAA",1,39.41,10.74,-0.03,0.06,2.88,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCCCCTATAACCCG",8,123.03,10.84,0.07,0.06,2.9,1.05,0,">1 nonsynonymous","T55S K114W T201M",3
"lib1","SARS-CoV-2","CCTCCCCTGCTTATTT",5,0.44,NA,NA,NA,NA,NA,NA,"stop","A81F D90Y F134*",3
"lib1","SARS-CoV-2","CCTCCCGACACCATTA",7,53.29,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y35S Q84M P96D G146M",4
"lib1","SARS-CoV-2","CCTCCCTGAGTTATGC",1,26.22,9.7,-1.06,0.12,2.54,1.06,0.01,">1 nonsynonymous","L122T S139F F160S",3
"lib1","SARS-CoV-2","CCTCCCTTTTATCCGA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q F99A C158S L187Q",4
"lib1","SARS-CoV-2","CCTCCGAAAATCTAAG",2,70.95,10.73,-0.03,0.05,2.87,1.09,0,"1 nonsynonymous","T46I",1
"lib1","SARS-CoV-2","CCTCCGACTGCAATTG",1,11.42,9.65,-1.11,0.13,2.75,1.09,0.01,">1 nonsynonymous","L111P E154L",2
"lib1","SARS-CoV-2","CCTCCGAGAAAAGAAG",10,81.62,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A42P G51I C61W T85L D90C K128G G152C N157F Y178T",9
"lib1","SARS-CoV-2","CCTCCGATAACTGACT",3,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62Y",1
"lib1","SARS-CoV-2","CCTCCGCTCTTGTAAG",6,2.55,NA,NA,NA,NA,NA,NA,"stop","F99I V115* P149M",3
"lib1","SARS-CoV-2","CCTCCGTACCTTATTA",5,17.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44L N92I",2
"lib1","SARS-CoV-2","CCTCCGTTGTTAGATG",1,10.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D A105P",2
"lib1","SARS-CoV-2","CCTCCTACTCGCTTAT",1,18.79,6.23,-4.54,1.07,1.5,1.3,0.06,">1 nonsynonymous","F70V W106Q S164I V173L T201M",5
"lib1","SARS-CoV-2","CCTCCTCAATTAAAGG",1,13.94,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","P54A G83K I88T F134L C150A",5
"lib1","SARS-CoV-2","CCTCCTCCACTCAGGC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","V37C K48L D59W N92*",4
"lib1","SARS-CoV-2","CCTCCTCTGCGAATTG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","K56Q E141*",2
"lib1","SARS-CoV-2","CCTCCTTACCAAACAT",6,158.52,8.64,-2.12,0.16,2.13,1.11,0.01,">1 nonsynonymous","S41M N64A G116W Q176H",4
"lib1","SARS-CoV-2","CCTCCTTCCGAACAAT",1,5.94,9.6,-1.17,0.09,2.81,1.19,0,">1 nonsynonymous","L125P H189R K198T",3
"lib1","SARS-CoV-2","CCTCCTTGAACTTTGA",2,63.74,9.86,-0.9,0.06,2.85,1.04,0,">1 nonsynonymous","A67L Y143W",2
"lib1","SARS-CoV-2","CCTCCTTGCACACCGA",5,44.1,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G51F C61A I80V G86F D97T",5
"lib1","SARS-CoV-2","CCTCCTTTAAGGACGC",3,125.95,8.44,-2.32,0.16,1.87,1.12,0.01,">1 nonsynonymous","E154S Q176V",2
"lib1","SARS-CoV-2","CCTCCTTTAATTTAGA",4,6.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D112V P133N L183N",3
"lib1","SARS-CoV-2","CCTCGAAGGATACGTA",1,79.35,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T100E R124C",2
"lib1","SARS-CoV-2","CCTCGAATATCCTTAT",8,155.08,10.81,0.04,0.07,2.91,1.03,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","CCTCGACAAAGTCCAA",9,83.26,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R127F Y165S T201K",3
"lib1","SARS-CoV-2","CCTCGACAATATTTAG",1,43.01,8.56,-2.21,0.17,1.99,1.14,0.01,">1 nonsynonymous","S43M G117T P133T",3
"lib1","SARS-CoV-2","CCTCGACCCCCGAATA",14,1.26,NA,NA,NA,NA,NA,NA,"stop","I80E G166*",2
"lib1","SARS-CoV-2","CCTCGAGAACCAGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56C P82* F99C F167P",4
"lib1","SARS-CoV-2","CCTCGAGAGCATATGC",1,16.1,10.73,-0.03,0.16,2.77,1.11,0.01,">1 nonsynonymous","S43M N171S K198L",3
"lib1","SARS-CoV-2","CCTCGAGCATAGTTAC",1,18.17,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","K48N K94S G146K",3
"lib1","SARS-CoV-2","CCTCGAGTCTATTCAG",2,12.28,8.92,-1.85,0.13,2.79,1.13,0.02,">1 nonsynonymous","A14V I142F",2
"lib1","SARS-CoV-2","CCTCGCAACCTACTTA",3,42.16,9.5,-1.27,0.16,1.84,1.1,0.01,">1 nonsynonymous","C6A D98M",2
"lib1","SARS-CoV-2","CCTCGCACCTTATCAC",3,85.21,10.67,-0.1,0.03,2.93,1.04,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","CCTCGCATACGTTTGT",1,58.55,10.18,-0.59,0.05,2.95,1,0,">1 nonsynonymous","K87A N120L",2
"lib1","SARS-CoV-2","CCTCGCCTATAACAAT",6,91.48,10.16,-0.6,0.07,2.68,1,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","CCTCGCCTTTCTAAAC",5,50.4,10.7,-0.06,0.08,2.82,1.11,0,"1 nonsynonymous","N64C",1
"lib1","SARS-CoV-2","CCTCGCGAAAACTATG",11,149.32,10.63,-0.14,0.03,2.94,1.02,0,">1 nonsynonymous","L5S A42E K56I",3
"lib1","SARS-CoV-2","CCTCGCTCAGTATTCC",12,79.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N58C N151R R179N",3
"lib1","SARS-CoV-2","CCTCGCTGGCTAAGCA",6,82.55,8.16,-2.61,0.23,1.97,1.17,0.02,">1 nonsynonymous","T46W D90Y F126N",3
"lib1","SARS-CoV-2","CCTCGGAAAAATCAAG",3,8.3,9.79,-0.97,0.06,2.89,1.04,0,">1 nonsynonymous","K56I T170K",2
"lib1","SARS-CoV-2","CCTCGGGAAACGCCCG",15,114.54,10.62,-0.15,0.03,2.9,1.04,0,">1 nonsynonymous","I2S S45N T63S",3
"lib1","SARS-CoV-2","CCTCGGTGGATGTAAA",3,18.64,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61D A89L F99S",3
"lib1","SARS-CoV-2","CCTCGGTTTGCATGCT",13,310.56,10.2,-0.57,0.05,2.8,1.02,0,">1 nonsynonymous","T55G D90L I138D",3
"lib1","SARS-CoV-2","CCTCGTAAAATCAACA",2,14.69,10.68,-0.09,0.08,3,1,0.01,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","CCTCGTAAACGATAGG",3,28,8.18,-2.59,0.22,1.5,1.16,0.02,">1 nonsynonymous","T3A S19K T63D G116H",4
"lib1","SARS-CoV-2","CCTCGTAAATGTTGAA",2,68.11,9.93,-0.83,0.08,2.05,1.06,0,">1 nonsynonymous","R27F N120Y P133S",3
"lib1","SARS-CoV-2","CCTCGTAATGAAGAAT",1,6.04,7.38,-3.38,0.38,1.5,1,0.05,">1 nonsynonymous","K48L T63C V181S",3
"lib1","SARS-CoV-2","CCTCGTACAAATGAGT",4,75.17,10.51,-0.25,0.07,2.91,1.06,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","CCTCGTACCAATGACG",1,20.83,10.42,-0.34,0.1,2.81,1.03,0,">1 nonsynonymous","A81S T201L",2
"lib1","SARS-CoV-2","CCTCGTAGTCGCGTTA",10,174.88,10.41,-0.36,0.05,2.82,1.06,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","CCTCGTATAAAATAAG",4,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A22N C49G P133N T170V",5
"lib1","SARS-CoV-2","CCTCGTATCACGCCAT",1,18.16,10.59,-0.17,0.19,2.85,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTCGTCAAAACTATT",7,105.45,10.1,-0.67,0.09,2.13,1.05,0,">1 nonsynonymous","E10L Y35C Y123F A192T",4
"lib1","SARS-CoV-2","CCTCGTCACGATTCCA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","N1Y C61I T100S G152* F185H",5
"lib1","SARS-CoV-2","CCTCGTCCAACGTGCT",5,23.02,9.28,-1.49,0.25,1.76,1.12,0.03,">1 nonsynonymous","Y35D K56D A81S T193I",4
"lib1","SARS-CoV-2","CCTCGTCCCAAGAACT",9,139.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48S L125I C150W",3
"lib1","SARS-CoV-2","CCTCGTCTAGCCTAAG",9,44.34,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","Y93S K114A T140H P161Y",4
"lib1","SARS-CoV-2","CCTCGTTAAGTGTTAA",4,51.12,10.86,0.09,0.08,2.88,1.1,0,"1 nonsynonymous","K199F",1
"lib1","SARS-CoV-2","CCTCGTTCCCATCTTT",3,64.58,10.27,-0.49,0.07,2.78,1.02,0,">1 nonsynonymous","N118A T201N",2
"lib1","SARS-CoV-2","CCTCGTTTGGTGACGT",3,52.74,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28R G146M N151K L162V P177A",5
"lib1","SARS-CoV-2","CCTCTAAAATTCTACA",3,1.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","CCTCTAACCATCACAC",1,7.03,9.14,-1.62,0.29,1.55,1.01,0.04,">1 nonsynonymous","V11S A22T",2
"lib1","SARS-CoV-2","CCTCTAAGGGAAATGC",4,32.35,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","E10N L95R",2
"lib1","SARS-CoV-2","CCTCTACAAACCTTAC",6,76.57,10.85,0.08,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCTACCAATTATAG",2,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V L183T",2
"lib1","SARS-CoV-2","CCTCTACCACTAGATG",2,10.82,9.08,-1.68,0.25,2.03,1.09,0.03,">1 nonsynonymous","L57H T63P T201K",3
"lib1","SARS-CoV-2","CCTCTACTCACCGATT",1,26.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123K",1
"lib1","SARS-CoV-2","CCTCTACTGACACTTG",13,70.09,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","C6F A22S D68K D98Y",4
"lib1","SARS-CoV-2","CCTCTATAATAACTTA",6,67.64,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36L N58L P96H C102V",4
"lib1","SARS-CoV-2","CCTCTATAATATAATT",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K P96Q G116H",3
"lib1","SARS-CoV-2","CCTCTATATATATATG",3,32.31,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y91R N118F F167H",3
"lib1","SARS-CoV-2","CCTCTATGCTGAAAAA",4,80.21,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27M G86E K94Q F99S",4
"lib1","SARS-CoV-2","CCTCTATTGTCTCAAC",1,81.76,10.8,0.04,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCTCAAAAGACATT",1,18.63,10.64,-0.13,0.09,2.92,1.04,0,">1 nonsynonymous","S29G T140I",2
"lib1","SARS-CoV-2","CCTCTCAAATACTTAA",4,17.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41I L131G",2
"lib1","SARS-CoV-2","CCTCTCAAGAACTAAA",4,107.24,10.16,-0.61,0.06,2.81,1.04,0,">1 nonsynonymous","P7H K48I D98S",3
"lib1","SARS-CoV-2","CCTCTCACTAATTCCT",10,55.23,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I2T Y35D T85R L95H N171F",5
"lib1","SARS-CoV-2","CCTCTCAGTTACGACG",6,48.54,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9S Q84M D90W P149T F156L Y165S",6
"lib1","SARS-CoV-2","CCTCTCCCAATCGATA",2,62.6,10.27,-0.5,0.1,2.64,1,0,">1 nonsynonymous","G9V Y123L",2
"lib1","SARS-CoV-2","CCTCTCGCCATGTACA",5,68.51,9.71,-1.06,0.11,1.93,1.1,0.01,">1 nonsynonymous","A105F P149L T201M",3
"lib1","SARS-CoV-2","CCTCTCTAGTCACATA",4,25.88,9.65,-1.12,0.16,1.82,1.14,0.01,">1 nonsynonymous","S41Y P82R",2
"lib1","SARS-CoV-2","CCTCTCTGTCTACTCT",2,31.26,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","K56L I88N K94A",3
"lib1","SARS-CoV-2","CCTCTCTTACAGAACG",7,58.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S L183H",2
"lib1","SARS-CoV-2","CCTCTGAAAACGTGCC",2,3.89,NA,NA,NA,NA,NA,NA,"stop","E10T D97* G116M T140L",4
"lib1","SARS-CoV-2","CCTCTGAAATTAAATA",3,28.47,10.36,-0.4,0.06,2.82,1,0,">1 nonsynonymous","P7L E141S",2
"lib1","SARS-CoV-2","CCTCTGAATAAAATAG",5,87.39,10.78,0.02,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCTGAATTTGACCG",5,0,NA,NA,NA,NA,NA,NA,"stop","R16N R73V L125C S139*",4
"lib1","SARS-CoV-2","CCTCTGAGGCCGGAGC",2,14.06,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50V V71M G116V T140H",4
"lib1","SARS-CoV-2","CCTCTGATATAGGGTG",2,0.24,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib1","SARS-CoV-2","CCTCTGCAGCTCTTGA",3,56.02,10.13,-0.64,0.09,2.24,1.03,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","CCTCTGCATAAATCGC",2,16.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2A F17T D97H G146K",4
"lib1","SARS-CoV-2","CCTCTGGAGGTCTACC",4,0.89,NA,NA,NA,NA,NA,NA,"stop","V37* T55Y",2
"lib1","SARS-CoV-2","CCTCTGGTCGAGCACG",8,9.25,NA,NA,NA,NA,NA,NA,"stop","C31N T85A Y143F T148V Y165* E186P P197F",7
"lib1","SARS-CoV-2","CCTCTGTACCACCTTG",10,156.82,9.14,-1.63,0.13,1.54,1.14,0.01,">1 nonsynonymous","N30L N64L E141L",3
"lib1","SARS-CoV-2","CCTCTGTCTGAAATGC",2,42.77,10.53,-0.24,0.04,2.93,1.06,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","CCTCTGTGAAGACCAA",3,1.81,NA,NA,NA,NA,NA,NA,"stop","V37* R124S",2
"lib1","SARS-CoV-2","CCTCTTAAACATTACC",6,69.45,10.36,-0.41,0.05,2.9,1.04,0,">1 nonsynonymous","T15L P149T",2
"lib1","SARS-CoV-2","CCTCTTAGAATATGAG",2,15.09,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","P7L F17L T55N F62T G146V",5
"lib1","SARS-CoV-2","CCTCTTAGAGGTAGTA",1,17.7,6.05,-4.72,1.24,1.5,1.17,0.03,">1 nonsynonymous","T63V W106A G155P",3
"lib1","SARS-CoV-2","CCTCTTAGTTAACGTT",1,23.22,9.62,-1.15,0.06,2.91,1.05,0,">1 nonsynonymous","L60Y Y119N L122F S129I",4
"lib1","SARS-CoV-2","CCTCTTATGAGCTGCA",3,87.35,9.07,-1.69,0.06,2.86,1.08,0,">1 nonsynonymous","D90S G117T",2
"lib1","SARS-CoV-2","CCTCTTATTATACATT",2,1.86,NA,NA,NA,NA,NA,NA,"stop","L60* N107V T201D",3
"lib1","SARS-CoV-2","CCTCTTCAAATTAAGT",1,19.83,10.75,-0.02,0.09,2.93,1.01,0,">1 nonsynonymous","F44S V173K A190G",3
"lib1","SARS-CoV-2","CCTCTTCATATACTAG",1,19.75,7.23,-3.53,0.61,1.5,1.19,0.07,">1 nonsynonymous","I28Q N151L L162M T201V",4
"lib1","SARS-CoV-2","CCTCTTCGGTACTTAA",2,8.62,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","G9S D34I V103C D137Q",4
"lib1","SARS-CoV-2","CCTCTTGCCATAGTCG",2,17.49,6.38,-4.39,0.36,1.5,1.1,0.01,">1 nonsynonymous","V32L I72H",2
"lib1","SARS-CoV-2","CCTCTTTACAAGAAAA",1,0.92,NA,NA,NA,NA,NA,NA,"stop","D68* Y119W",2
"lib1","SARS-CoV-2","CCTCTTTCACACACAT",14,49.87,7.05,-3.71,0.58,1.5,1.17,0.06,">1 nonsynonymous","Y35K F99T",2
"lib1","SARS-CoV-2","CCTCTTTCAGCCCACA",5,29.73,10.74,-0.03,0.08,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTCTTTGATTTAAGG",4,43.43,10.19,-0.58,0.05,2.96,1,0,">1 nonsynonymous","G9S L125A",2
"lib1","SARS-CoV-2","CCTCTTTTGGAAGATA",10,29.33,6,-4.76,1.34,3,1.08,0.01,">1 nonsynonymous","G51R Y66H D97R N110Q L162Q Q176M",6
"lib1","SARS-CoV-2","CCTGAAAAAACCAGAT",3,1.73,NA,NA,NA,NA,NA,NA,"stop","T15G D97L G116N R127*",4
"lib1","SARS-CoV-2","CCTGAAAACAAATGTA",2,461.05,10.28,-0.48,0.03,2.86,1.01,0,">1 nonsynonymous","K56L N120W",2
"lib1","SARS-CoV-2","CCTGAAAATAACTTAC",4,21.14,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19G Y50R L95M Y119E R136V S164A V173Q",7
"lib1","SARS-CoV-2","CCTGAAAATCTAGTAG",1,33.23,6,-4.76,2,1.5,1.15,0.04,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","CCTGAAAGACCACCCA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","V181*",1
"lib1","SARS-CoV-2","CCTGAAAGAGTCAATA",4,179.21,10.28,-0.48,0.03,2.9,1.02,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","CCTGAAATAGTGACTA",3,13.38,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","C6L R25L G86V Y119C",4
"lib1","SARS-CoV-2","CCTGAAATATACACAA",10,163.05,10.29,-0.47,0.03,2.92,1.03,0,">1 nonsynonymous","T63N F156L",2
"lib1","SARS-CoV-2","CCTGAAATGAATATCA",1,14.32,8.29,-2.47,0.29,1.81,1.13,0.04,">1 nonsynonymous","R16D K48M L125I R136G",4
"lib1","SARS-CoV-2","CCTGAACACATAACGC",2,13.34,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","G101P",1
"lib1","SARS-CoV-2","CCTGAACACCTATAGG",4,25.68,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6R F12R V71K A105L I142R L183P",6
"lib1","SARS-CoV-2","CCTGAACATACCCAAA",4,60.61,10.86,0.1,0.08,2.91,1.04,0,">1 nonsynonymous","G9D S139T",2
"lib1","SARS-CoV-2","CCTGAACTAGGATAGA",3,25.99,10.6,-0.16,0.08,2.98,1,0,">1 nonsynonymous","K128S T148G F160N",3
"lib1","SARS-CoV-2","CCTGAACTCTCATAAG",1,8.13,10.45,-0.31,0.15,2.8,1.16,0.01,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","CCTGAATAAGCACTGA",5,0,NA,NA,NA,NA,NA,NA,"stop","I28*",1
"lib1","SARS-CoV-2","CCTGAATCAATTATTA",7,70.63,10.71,-0.05,0.07,2.97,1.02,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","CCTGAATGTAATCGCA",1,7.39,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I28P D112Y P133N",3
"lib1","SARS-CoV-2","CCTGAATTAAACTCTA",3,44.77,10.07,-0.7,0.07,2.59,1.04,0,">1 nonsynonymous","C102M S200I",2
"lib1","SARS-CoV-2","CCTGAATTTGAAAAAG",9,45.33,6.18,-4.59,0.86,1.5,1.12,0.03,">1 nonsynonymous","F12I N107F D137S",3
"lib1","SARS-CoV-2","CCTGACAAAACGGTAC",12,134.18,9.21,-1.56,0.09,2.73,1.15,0,">1 nonsynonymous","L60T Q168V",2
"lib1","SARS-CoV-2","CCTGACACACAAGTTG",3,7.66,9.58,-1.19,0.19,2.45,1,0.02,">1 nonsynonymous","G9R T63I T85A P149C",4
"lib1","SARS-CoV-2","CCTGACACAGAAATAT",5,58.05,10.77,0.01,0.07,2.95,1.03,0,">1 nonsynonymous","V32R V37L T85V",3
"lib1","SARS-CoV-2","CCTGACAGTGCAAAAT",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L Y119T",2
"lib1","SARS-CoV-2","CCTGACCGGGAATGCC",2,36.73,8.74,-2.03,0.09,3,1.05,0,">1 nonsynonymous","G9R G166I S200P",3
"lib1","SARS-CoV-2","CCTGACCTGTAATTTA",9,64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2N V37P K48G D68K P82A Y121R E141L P169S",8
"lib1","SARS-CoV-2","CCTGACGAACACAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14T S184*",2
"lib1","SARS-CoV-2","CCTGACGCGAATTGAG",2,21.58,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T63S L131E V153R T170M",4
"lib1","SARS-CoV-2","CCTGACGTTAGTTACG",2,138.18,10.76,-0.01,0.05,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTGACTAAGATGATA",4,45.27,10.15,-0.61,0.07,2.83,1.02,0,">1 nonsynonymous","N13Y G83K",2
"lib1","SARS-CoV-2","CCTGACTCCTATGAAT",1,11.87,10.57,-0.19,0.1,2.93,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTGACTGGTATAACA",4,34.79,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D68V V181R",2
"lib1","SARS-CoV-2","CCTGACTTTATCCGGC",8,125.45,10.02,-0.74,0.05,2.5,1.02,0,"1 nonsynonymous","Q79W",1
"lib1","SARS-CoV-2","CCTGAGAAGATGAATG",4,21.11,7.28,-3.49,0.43,1.5,1.13,0.05,">1 nonsynonymous","L60Q N92Y R127H Y159V",4
"lib1","SARS-CoV-2","CCTGAGAAGCATCATT",3,28.9,6.19,-4.58,0.56,1.5,1.21,0.02,">1 nonsynonymous","N1L K48S D68T G146S F160T",5
"lib1","SARS-CoV-2","CCTGAGAATGTCTGGG",6,91.85,10.08,-0.69,0.08,2.27,1.04,0,">1 nonsynonymous","F8A S200P",2
"lib1","SARS-CoV-2","CCTGAGACAGTTGGAT",2,19.83,6,-4.76,2,3,1.3,0.02,">1 nonsynonymous","A33P A42R L57G D90H S129R Y175E",6
"lib1","SARS-CoV-2","CCTGAGAGCTTTACAA",5,25.73,8.88,-1.89,0.3,1.8,1.14,0.05,">1 nonsynonymous","P7F A33T V71G D90C K114D L122Q F134P",7
"lib1","SARS-CoV-2","CCTGAGAGGATGTAGC",1,34.83,9.58,-1.19,0.15,2.32,1.04,0.01,">1 nonsynonymous","C49W T85F",2
"lib1","SARS-CoV-2","CCTGAGATATCGTAAT",2,13.68,6.12,-4.65,0.83,1.5,1.23,0.01,">1 nonsynonymous","V37S Y93A T148I Y165K",4
"lib1","SARS-CoV-2","CCTGAGCAAAGCTTCA",2,14.72,8.63,-2.14,0.18,1.95,1.07,0.01,"1 nonsynonymous","G74T",1
"lib1","SARS-CoV-2","CCTGAGGCTGGGACTT",1,29.27,6.56,-4.2,0.32,1.5,1.15,0.01,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","CCTGAGTATATAAAAA",5,24.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A89T G117K A145W G152C",4
"lib1","SARS-CoV-2","CCTGATAAACCTATAC",1,13.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8I N13G Y35F Y50M T55L L131I",6
"lib1","SARS-CoV-2","CCTGATACCAAATGTC",5,23.52,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S113R N118L T148I N151F",4
"lib1","SARS-CoV-2","CCTGATATAGATGTAA",1,1.64,NA,NA,NA,NA,NA,NA,"stop","T3A Y21E T55* P133R",4
"lib1","SARS-CoV-2","CCTGATCAGTCTATAA",2,9.52,9.02,-1.74,0.35,1.68,1.02,0.02,">1 nonsynonymous","N4R V65P",2
"lib1","SARS-CoV-2","CCTGATCATAACTGCA",3,17.29,7.3,-3.46,0.31,1.5,1,0.04,">1 nonsynonymous","L131H E154A S164V T201K",4
"lib1","SARS-CoV-2","CCTGATCATTACGGTG",1,7.45,NA,NA,NA,NA,NA,0.57,">1 nonsynonymous","S19L S113F",2
"lib1","SARS-CoV-2","CCTGATGAAATTATAA",7,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54F D97F N151I C158D G172T E186L",6
"lib1","SARS-CoV-2","CCTGATGACAGGTACG",5,142.44,10.8,0.04,0.05,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTGATGACGTCACTT",1,6.46,10.31,-0.46,0.15,2.89,1,0.01,">1 nonsynonymous","S41R T46K",2
"lib1","SARS-CoV-2","CCTGATGATTTAGACT",2,13.7,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","K87Q F99K A105L P149K P197F",5
"lib1","SARS-CoV-2","CCTGATGCACATAAAC",6,113.53,8.41,-2.35,0.13,2.54,1.08,0.01,">1 nonsynonymous","T63A K114A Q176E",3
"lib1","SARS-CoV-2","CCTGATGCCCACATAT",3,78.09,10.79,0.02,0.08,2.91,1.04,0,">1 nonsynonymous","T85K K198W",2
"lib1","SARS-CoV-2","CCTGATGCCGGATTTT",1,87.58,9.78,-0.98,0.06,2.85,1.04,0,">1 nonsynonymous","I80V G116E F156K",3
"lib1","SARS-CoV-2","CCTGATGCGGAGTATC",1,24.41,10.3,-0.46,0.1,2.83,1.02,0,">1 nonsynonymous","T15V D97S",2
"lib1","SARS-CoV-2","CCTGATGCTGAGGTCT",2,2.51,NA,NA,NA,NA,NA,NA,"stop","S19L Y39L W106* T148G N157D V182L",6
"lib1","SARS-CoV-2","CCTGATGTAAATTTTA",7,1.53,NA,NA,NA,NA,NA,NA,"stop","C6K S36M C61* T170M R179L",5
"lib1","SARS-CoV-2","CCTGATGTCTTAGAAC",1,40.72,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","D90T D112K R136F Q168E",4
"lib1","SARS-CoV-2","CCTGATTATAATAGTT",3,30.68,6.7,-4.07,0.55,1.5,1.04,0.06,">1 nonsynonymous","F17V I28A I104G",3
"lib1","SARS-CoV-2","CCTGATTCCGTTATGT",7,0.1,NA,NA,NA,NA,NA,NA,"stop","V11D F17A R78* Y175V",4
"lib1","SARS-CoV-2","CCTGATTTGGCTGTCT",1,11.21,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","D68E E141M",2
"lib1","SARS-CoV-2","CCTGCAACGACCTTAT",1,41.54,10.35,-0.41,0.05,2.9,1.03,0,">1 nonsynonymous","F160A S184D",2
"lib1","SARS-CoV-2","CCTGCAACTAAGTTGA",14,109.81,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","K48H S53L D59R A89R K128L E141K",6
"lib1","SARS-CoV-2","CCTGCACATACACTAC",1,13.89,9.44,-1.33,0.1,2.6,1.08,0.01,">1 nonsynonymous","N13S S29F G166N",3
"lib1","SARS-CoV-2","CCTGCACATCGATGAC",2,105.15,9.17,-1.59,0.12,1.91,1.14,0.01,">1 nonsynonymous","G74C D98H",2
"lib1","SARS-CoV-2","CCTGCACCAAAAATAT",2,19.07,10.49,-0.27,0.14,2.76,1.14,0.01,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","CCTGCACGAATGTCTC",2,28.47,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","T3S G86R L122A T201V",4
"lib1","SARS-CoV-2","CCTGCACGTATACGAT",3,39.12,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","CCTGCAGCGCTAATGG",2,34.68,8.16,-2.61,0.14,2.47,1.13,0.01,">1 nonsynonymous","L5K G146L",2
"lib1","SARS-CoV-2","CCTGCATATAATCGTT",2,39.28,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51Y Y119H R127H N157C",4
"lib1","SARS-CoV-2","CCTGCATCATTCAACT",2,20.23,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8C S36E S45M T55Y N64Y Y159V",6
"lib1","SARS-CoV-2","CCTGCATTTACGATAG",5,5.3,NA,NA,NA,NA,NA,NA,"stop","N4V E10* E76S V173*",4
"lib1","SARS-CoV-2","CCTGCCCACCAGTAGT",3,3.62,NA,NA,NA,NA,NA,NA,"stop","L38P V65I Y91V N120* V182H",5
"lib1","SARS-CoV-2","CCTGCCCGATCAACCA",5,38.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131Q P191F K198A",3
"lib1","SARS-CoV-2","CCTGCCCGTTATAATG",8,51.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6A S43K K48V T63K V77W A81Q L95E G101A",8
"lib1","SARS-CoV-2","CCTGCCTAAAAGGACT",3,72.89,8.26,-2.5,0.3,1.5,1.02,0.03,">1 nonsynonymous","L60R D68M",2
"lib1","SARS-CoV-2","CCTGCGAAAGGCCACC",3,2.02,NA,NA,NA,NA,NA,NA,"stop","N4S S29V K87* N110T",4
"lib1","SARS-CoV-2","CCTGCGAAAGGTCTAA",5,44.06,6,-4.76,2,3,1.35,0.01,">1 nonsynonymous","N58L T85R T140A F167L",4
"lib1","SARS-CoV-2","CCTGCGAAGGACCAAT",1,89.46,10.7,-0.06,0.04,2.97,1,0,">1 nonsynonymous","Y39V G51Q N120E",3
"lib1","SARS-CoV-2","CCTGCGAATTCCATAG",4,74.5,10.86,0.09,0.08,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTGCGATACGCTGCC",3,40.6,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S43L G86F Y91L",3
"lib1","SARS-CoV-2","CCTGCGATATTTGAGG",2,41.59,10.8,0.03,0.06,2.9,1.03,0,">1 nonsynonymous","K56L N151L",2
"lib1","SARS-CoV-2","CCTGCGCTAAACAAAT",2,11.43,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","S19I R73Y K128P",3
"lib1","SARS-CoV-2","CCTGCGGGGCGCGTAG",14,92.9,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","K94L N107H",2
"lib1","SARS-CoV-2","CCTGCGTGAAAACTTT",2,71.83,9.66,-1.1,0.13,2.08,1.06,0.01,">1 nonsynonymous","A89G P149S",2
"lib1","SARS-CoV-2","CCTGCGTTCAAAGTCA",1,37.92,8.6,-2.17,0.24,1.5,1.1,0.02,">1 nonsynonymous","Y39W C102I Y121A",3
"lib1","SARS-CoV-2","CCTGCTAACATTTTAC",3,11.13,6.12,-4.64,0.53,3,1.03,0.01,">1 nonsynonymous","S41Y W106T N118P R179G",4
"lib1","SARS-CoV-2","CCTGCTACTAACACCA",1,28.05,10.34,-0.42,0.06,3,1.01,0,">1 nonsynonymous","K48E D75E",2
"lib1","SARS-CoV-2","CCTGCTACTCGGTGGA",4,39.65,10.62,-0.15,0.04,2.95,1.04,0,">1 nonsynonymous","I2N Q84R Y175F",3
"lib1","SARS-CoV-2","CCTGCTAGGAGCAGCG",2,100.37,10.08,-0.68,0.08,2.48,1.04,0,">1 nonsynonymous","N30S C61Y V180I",3
"lib1","SARS-CoV-2","CCTGCTATAAAATGTC",2,57.97,8.08,-2.68,0.09,2.54,1.06,0,"1 nonsynonymous","S113E",1
"lib1","SARS-CoV-2","CCTGCTCCAGCTAACA",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116A Y123L P133K S200K",4
"lib1","SARS-CoV-2","CCTGCTCTTACTCGTA",5,118.6,10.25,-0.51,0.08,2.7,1,0,">1 nonsynonymous","N13M Q163T",2
"lib1","SARS-CoV-2","CCTGCTGAACTCCATC",5,85.24,6.29,-4.47,0.65,1.5,1.21,0.02,">1 nonsynonymous","F62L R124S",2
"lib1","SARS-CoV-2","CCTGCTGAATGCAAAG",1,1.09,NA,NA,NA,NA,NA,NA,"stop","R27K C61V K114S Y123T Y165* T201W",6
"lib1","SARS-CoV-2","CCTGCTGTTTAGGATT",2,15.68,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9V N64V I88C Y178A",4
"lib1","SARS-CoV-2","CCTGCTTACCAATAAT",6,103.93,10.6,-0.17,0.07,2.89,1.03,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","CCTGCTTGCTAAAGAA",7,131.37,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V77P F167A",2
"lib1","SARS-CoV-2","CCTGGAACAACTCCAT",5,44.55,10.57,-0.19,0.08,2.82,1.13,0,">1 nonsynonymous","D97I S147N",2
"lib1","SARS-CoV-2","CCTGGAAGTACTTCAT",1,28.89,8.78,-1.99,0.18,1.5,1.17,0.02,">1 nonsynonymous","S36K G51P T63E",3
"lib1","SARS-CoV-2","CCTGGAATACATGTAA",1,71.35,8.34,-2.43,0.15,2.61,1.13,0.01,">1 nonsynonymous","L5G Y35V R73H",3
"lib1","SARS-CoV-2","CCTGGACACTACAATT",1,12.09,9.67,-1.09,0.11,2.84,1.05,0,"1 nonsynonymous","Q144C",1
"lib1","SARS-CoV-2","CCTGGACAGAACCAAT",11,6.9,NA,NA,NA,NA,NA,NA,"stop","A89F V103* F156* A190S",4
"lib1","SARS-CoV-2","CCTGGACCCCCATGAC",5,79.17,9.73,-1.04,0.12,1.91,1.07,0,">1 nonsynonymous","A14H S19G",2
"lib1","SARS-CoV-2","CCTGGACTCTAAACAG",1,20.98,8.67,-2.09,0.19,1.77,1.16,0.02,">1 nonsynonymous","T46C P82V K87T",3
"lib1","SARS-CoV-2","CCTGGACTTAAACATC",2,68.28,10.72,-0.04,0.05,2.94,1.02,0,"1 nonsynonymous","N110Y",1
"lib1","SARS-CoV-2","CCTGGAGAAGAAACAC",4,77.29,8.79,-1.97,0.07,2.91,1.06,0,">1 nonsynonymous","L5Q A67I G166M S200M",4
"lib1","SARS-CoV-2","CCTGGAGAGTACCGTG",4,47.62,10.09,-0.68,0.13,2.59,1.03,0.01,">1 nonsynonymous","T3G W106Y",2
"lib1","SARS-CoV-2","CCTGGATAAAAAAGAA",9,28.63,6.04,-4.72,0.94,1.5,1.15,0.02,">1 nonsynonymous","N4S L57T C102W K114R",4
"lib1","SARS-CoV-2","CCTGGATAAACTAATT",6,4.59,NA,NA,NA,NA,NA,NA,"stop","S29* K132C Q144M P149L N157G",5
"lib1","SARS-CoV-2","CCTGGATACCAGAGGG",10,22.09,6.17,-4.59,1.43,1.5,1.25,0.07,">1 nonsynonymous","V52R V71L G116M",3
"lib1","SARS-CoV-2","CCTGGCCCTGGGGGCA",2,58.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21M K26A T46K D90S F167M",5
"lib1","SARS-CoV-2","CCTGGCCTAAAACGTT",6,37.87,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y93V G101S R127L D137P",4
"lib1","SARS-CoV-2","CCTGGCCTACTTTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F F62I D90G G101T N120V Q144W",6
"lib1","SARS-CoV-2","CCTGGCGTAGAACCTT",4,23.39,6.1,-4.67,1.39,1.5,1.31,0.05,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","CCTGGCTATTCTAGAA",2,29.47,10.46,-0.31,0.06,2.85,1,0,">1 nonsynonymous","D34R T193Y V194G",3
"lib1","SARS-CoV-2","CCTGGGCACTAATCCA",3,74.79,10.79,0.03,0.07,2.9,1.05,0,"1 nonsynonymous","S43G",1
"lib1","SARS-CoV-2","CCTGGGCCGTAAACAC",4,236.53,9.18,-1.58,0.2,1.64,1.11,0.02,">1 nonsynonymous","C49F G83S N120R",3
"lib1","SARS-CoV-2","CCTGGGCGGTTTACTG",5,26.12,7.51,-3.26,0.46,1.5,1.11,0.08,"1 nonsynonymous","R25I",1
"lib1","SARS-CoV-2","CCTGGGCGTAACGAAA",2,11.23,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T3Y G83R D90S P96F T148P G174C P191N",7
"lib1","SARS-CoV-2","CCTGGGGAGTTACGTG",3,61.35,9.94,-0.82,0.08,2.17,1.01,0,"1 nonsynonymous","F8H",1
"lib1","SARS-CoV-2","CCTGGGTCAGCACATA",1,16.74,10.13,-0.63,0.08,2.74,1,0.01,"1 nonsynonymous","T15C",1
"lib1","SARS-CoV-2","CCTGGTAAATCTCTTT",1,53.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5K F12L T55S Y119G P161T",5
"lib1","SARS-CoV-2","CCTGGTAATTACGTTG",1,32.7,10.86,0.09,0.06,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTGGTACACTGGAAT",1,4.45,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CCTGGTAGGATAAAAC",2,35.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44C G101A L131D Y143L",4
"lib1","SARS-CoV-2","CCTGGTATGACTCTCC",1,7.57,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","V103L S139Y",2
"lib1","SARS-CoV-2","CCTGGTATGCGAATGT",5,8.24,6,-4.76,2,3,1.15,0.02,">1 nonsynonymous","N13L S45V L57G T63L Y159I",5
"lib1","SARS-CoV-2","CCTGGTTGCTTCAACG",7,165.05,10.69,-0.08,0.06,2.88,1.06,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","CCTGTAAACATGTCTC",3,31.99,9.89,-0.87,0.13,1.92,1.1,0.01,">1 nonsynonymous","A14N A33T K94R N120Y",4
"lib1","SARS-CoV-2","CCTGTAAACTAAGTAC",3,20.29,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K56V V103D K114S C150S P197T",5
"lib1","SARS-CoV-2","CCTGTACAAATTCATG",2,72.92,10.1,-0.66,0.06,2.98,1,0,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","CCTGTACATAATGTTA",1,53.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y35P G51D N64S Y121S C150G P161W",6
"lib1","SARS-CoV-2","CCTGTACCGAATGAGG",2,94.04,6.3,-4.46,0.59,1.5,1.24,0.02,">1 nonsynonymous","F44T D68E N107P",3
"lib1","SARS-CoV-2","CCTGTATATTCTAATT",6,0.81,NA,NA,NA,NA,NA,NA,"stop","G101* V182F",2
"lib1","SARS-CoV-2","CCTGTATTTCCCAGCC",4,14.23,NA,NA,NA,NA,NA,NA,"stop","C102W W106* T170M",3
"lib1","SARS-CoV-2","CCTGTCAAGGGGACTT",2,58.03,9.98,-0.79,0.12,2.27,1.02,0,">1 nonsynonymous","R27G K56R S113A P149Y",4
"lib1","SARS-CoV-2","CCTGTCATATCTATTC",1,9,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R27M Q84R K94V K198P",4
"lib1","SARS-CoV-2","CCTGTCGAGGGTCAAA",4,90.53,10.58,-0.19,0.05,2.91,1.05,0,">1 nonsynonymous","E141N F160P",2
"lib1","SARS-CoV-2","CCTGTCGCAGCGTTAG",7,108.87,10.68,-0.09,0.05,2.91,1.05,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","CCTGTCGTTATGAACA",1,12.81,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N4T G9K N58S P82S I104Y N107K N157F",7
"lib1","SARS-CoV-2","CCTGTCTAAGAGCCCT",5,109.66,9.41,-1.35,0.07,2.86,1.09,0,">1 nonsynonymous","S129R G166Q",2
"lib1","SARS-CoV-2","CCTGTCTAGTCAGTAT",10,121.98,10.76,0,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTGTGATTAGAATGA",1,24.02,8.66,-2.1,0.19,1.72,1.1,0.02,">1 nonsynonymous","G146P Y175F",2
"lib1","SARS-CoV-2","CCTGTGCTGCCCCCCA",7,64.41,6.02,-4.75,1.32,1.5,1.2,0.03,">1 nonsynonymous","I28T T148P Y165F S200I",4
"lib1","SARS-CoV-2","CCTGTGGACAATGATC",2,1.3,NA,NA,NA,NA,NA,NA,"stop","A33* P54H F99L",3
"lib1","SARS-CoV-2","CCTGTGGCGACAACCA",2,9.59,10.91,0.14,0.14,2.91,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTGTGTTTACTCCAA",2,41.98,10.18,-0.58,0.05,2.95,1.01,0,">1 nonsynonymous","T55I C61K K87I K128Y P149M",5
"lib1","SARS-CoV-2","CCTGTTAATTTAATGT",1,17.2,10.71,-0.05,0.08,2.88,1.05,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","CCTGTTAGAATTCTTG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V N30R P96V Q163E",4
"lib1","SARS-CoV-2","CCTGTTAGGGCCACAG",4,77.83,10.5,-0.26,0.04,2.91,1.05,0,">1 nonsynonymous","I2S D97V S129Y",3
"lib1","SARS-CoV-2","CCTGTTATAATTACAG",1,13.09,10.43,-0.33,0.16,2.76,1.03,0.01,">1 nonsynonymous","N4K F62S N130G T201Y",4
"lib1","SARS-CoV-2","CCTGTTCAACCCTAAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","F44T C61L A89* W106G Y143G T148Y G172L",7
"lib1","SARS-CoV-2","CCTGTTCATTAATTCT",2,22.42,10.8,0.04,0.11,2.91,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTGTTCGTTTCCGAG",1,722.52,9.92,-0.84,0.05,2.19,1.05,0,">1 nonsynonymous","T15F S41T T85I",3
"lib1","SARS-CoV-2","CCTGTTCTAATCCACT",2,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E N13T C31T N107R R127T L183S",6
"lib1","SARS-CoV-2","CCTGTTGACTTGACCC",6,25.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2P N13S D34E G86S R124T Y175K C195Y",7
"lib1","SARS-CoV-2","CCTGTTTAAAGAAACA",2,25.42,8.95,-1.81,0.1,2.2,1.05,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","CCTGTTTAAATATAGG",6,54.48,6.04,-4.73,1.56,1.5,1.31,0.04,">1 nonsynonymous","L5R L122C D137F",3
"lib1","SARS-CoV-2","CCTGTTTACAATAATG",2,47.55,10.25,-0.52,0.07,2.48,1.03,0,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","CCTGTTTGTGAAAATG",7,102.57,10.53,-0.23,0.06,2.82,1.02,0,">1 nonsynonymous","Y123W S164Q",2
"lib1","SARS-CoV-2","CCTGTTTTACAATGCC",3,40.33,10.22,-0.54,0.09,2.65,1,0,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","CCTTAAAAAAGAATAT",3,67.06,10.34,-0.43,0.07,2.93,1.04,0,">1 nonsynonymous","F44V C61N",2
"lib1","SARS-CoV-2","CCTTAAAAGCCCCGGT",6,21.56,6.21,-4.56,0.6,1.5,1.16,0.02,">1 nonsynonymous","C49H L60S Y119M S129M P161K",5
"lib1","SARS-CoV-2","CCTTAAACCAATACTT",2,6.86,8.52,-2.24,0.2,1.83,1.11,0.01,">1 nonsynonymous","T100L W106S P169M",3
"lib1","SARS-CoV-2","CCTTAAAGACCATCTT",1,2.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","CCTTAAAGCTCGGTAC",2,21.72,6,-4.76,2,3,1.33,0.01,"1 nonsynonymous","V181R",1
"lib1","SARS-CoV-2","CCTTAAAGTAGAATTA",12,96.29,6,-4.76,2,3,1.18,0,">1 nonsynonymous","S41A N130S S139I F167A",4
"lib1","SARS-CoV-2","CCTTAAATGCAACAAG",3,15.61,10.65,-0.12,0.06,2.86,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTAAATGGCTTAAT",1,109.92,9.19,-1.57,0.08,2.66,1.15,0,">1 nonsynonymous","T85P F126K E154K K198N",4
"lib1","SARS-CoV-2","CCTTAACAACACCGAC",1,14.81,10.47,-0.3,0.05,2.88,1.04,0,"1 nonsynonymous","F62E",1
"lib1","SARS-CoV-2","CCTTAACAACATGCAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N4G Y93* K128I T170L",4
"lib1","SARS-CoV-2","CCTTAACAGATGCAAC",1,92.76,9.39,-1.38,0.08,2.73,1.12,0,">1 nonsynonymous","C61T K114N V115M Q144T",4
"lib1","SARS-CoV-2","CCTTAACATCTGAGGC",5,91.55,10.49,-0.27,0.05,2.86,1.09,0,"1 nonsynonymous","S43N",1
"lib1","SARS-CoV-2","CCTTAACGACCCAAAA",2,13.97,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14T W23L G51N N157G",4
"lib1","SARS-CoV-2","CCTTAACGCGTCTAAA",4,112.88,10.99,0.23,0.07,2.79,1.14,0,">1 nonsynonymous","D97Q Q163V",2
"lib1","SARS-CoV-2","CCTTAAGAACGACAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* G86V Y123G E141W C158R",5
"lib1","SARS-CoV-2","CCTTAAGACGAGAACG",1,5.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70A A105H N151S S200L",4
"lib1","SARS-CoV-2","CCTTAAGCAAATATAG",3,21.23,10.59,-0.17,0.1,2.91,1.03,0,"1 nonsynonymous","G152T",1
"lib1","SARS-CoV-2","CCTTAAGTTGGCGGCT",9,136.38,10.07,-0.7,0.06,2.89,1,0,">1 nonsynonymous","S139K Y175H S200V",3
"lib1","SARS-CoV-2","CCTTAATAAAGACTAG",25,233.58,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","F44D L60R L95S",3
"lib1","SARS-CoV-2","CCTTAATAATCTCTGA",7,1.36,NA,NA,NA,NA,NA,NA,"stop","I2V E10* P96A Q168P V180L K199M",6
"lib1","SARS-CoV-2","CCTTAATACCATTTCG",6,25.27,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F12Y V103R S113V P149F",4
"lib1","SARS-CoV-2","CCTTAATATAGTGCAT",5,95.61,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","R16C G172I",2
"lib1","SARS-CoV-2","CCTTAATCAACGACCG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L F70Y C150Y",3
"lib1","SARS-CoV-2","CCTTAATTGAAAAGAA",7,36.77,10.65,-0.12,0.05,2.94,1,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","CCTTAATTTACTAGAG",2,60.1,10.8,0.03,0.06,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTACAACCGTATTA",1,20.53,6.9,-3.87,0.42,1.9,1.05,0.05,">1 nonsynonymous","G9R K56Y G172V",3
"lib1","SARS-CoV-2","CCTTACAAGAAAGCGG",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N K56M G101L L162P K198I",5
"lib1","SARS-CoV-2","CCTTACACACTCCGGA",7,67.84,10.27,-0.49,0.07,2.75,1.05,0,">1 nonsynonymous","I2P A42N C61H N107C",4
"lib1","SARS-CoV-2","CCTTACACAGTAGGCC",3,16.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7T G51S C61S D68W P82L D90I L183S",7
"lib1","SARS-CoV-2","CCTTACAGATAAAGCA",2,53.6,10.58,-0.18,0.07,2.95,1.04,0,"1 nonsynonymous","T3F",1
"lib1","SARS-CoV-2","CCTTACATAGCAGCTT",4,19.45,6,-4.76,0.76,1.5,1.11,0.01,">1 nonsynonymous","R25N V37T N58M V65M",4
"lib1","SARS-CoV-2","CCTTACATCATCCAGC",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P D34T F99V Y121E K128I",5
"lib1","SARS-CoV-2","CCTTACCACGAATAAA",3,16.43,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G51V G86K",2
"lib1","SARS-CoV-2","CCTTACCCAAGTTATT",4,30.14,9.01,-1.76,0.08,2.49,1.1,0,">1 nonsynonymous","N4H F44K K87E",3
"lib1","SARS-CoV-2","CCTTACCGCGCACCAT",9,97.22,10.89,0.13,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTACCTATAGACCT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","N4L D98R P149* G174*",4
"lib1","SARS-CoV-2","CCTTACCTTTAAACGA",2,38.13,10.67,-0.1,0.1,2.81,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTACGCTACCTCTA",1,7.64,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I2Q S43I L95T C102T N107A Y121M K198G",7
"lib1","SARS-CoV-2","CCTTACGGTTACCAAT",3,3.29,NA,NA,NA,NA,NA,NA,"stop","A33V T46* P82A F99S P197Q",5
"lib1","SARS-CoV-2","CCTTACGTAGTATATC",4,11.26,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S45G F70P",2
"lib1","SARS-CoV-2","CCTTACGTTAACTTGG",5,41.69,10.06,-0.71,0.05,2.98,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","CCTTACTAAACACAAT",5,44.99,9.18,-1.58,0.07,2.85,1.11,0,">1 nonsynonymous","L5S L125Y",2
"lib1","SARS-CoV-2","CCTTACTCGTCTAAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","C6* S19L I88C F99V",4
"lib1","SARS-CoV-2","CCTTACTGTTAGTATG",6,17.92,7.46,-3.3,0.23,1.5,1.1,0.01,">1 nonsynonymous","A81E G86W Y93C L122C",4
"lib1","SARS-CoV-2","CCTTAGAAACTGTAAT",1,40.49,9.53,-1.23,0.16,1.86,1.24,0.01,">1 nonsynonymous","V11R S147T",2
"lib1","SARS-CoV-2","CCTTAGAATCTCCACT",3,11.16,10.83,0.07,0.1,2.94,1.03,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","CCTTAGACCCCAGTCT",4,0,NA,NA,NA,NA,NA,NA,"stop","N118* T148S",2
"lib1","SARS-CoV-2","CCTTAGAGACACAGGT",5,45.15,8.52,-2.24,0.2,1.67,1.13,0.01,">1 nonsynonymous","V103M G166S",2
"lib1","SARS-CoV-2","CCTTAGCGCTCGATTC",6,0,NA,NA,NA,NA,NA,NA,"stop","C6V K114C Y121S G146*",4
"lib1","SARS-CoV-2","CCTTAGGATCTAAGTC",5,51.09,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","G86L G101N G116Q F167E",4
"lib1","SARS-CoV-2","CCTTAGGCATAGAGGT",4,97.37,6.29,-4.47,0.83,1.5,1.35,0.04,">1 nonsynonymous","L5F V65A D137Y",3
"lib1","SARS-CoV-2","CCTTAGTAAAAACCAA",3,34.23,9.53,-1.23,0.17,1.78,1.14,0.01,">1 nonsynonymous","K56G A89S D97C N120F",4
"lib1","SARS-CoV-2","CCTTAGTACCCTTCCG",1,14.78,9.89,-0.87,0.19,1.88,1.04,0.04,">1 nonsynonymous","Y93F Y123M",2
"lib1","SARS-CoV-2","CCTTAGTATAGAGAAA",2,39.51,10.7,-0.07,0.09,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTTAGTCACAACATC",1,27.38,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R25C F99N T140P",3
"lib1","SARS-CoV-2","CCTTAGTGGCGGACGT",1,26.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","CCTTATAACCGAAACT",4,38.52,10.8,0.04,0.05,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTATAAGCCCTATG",7,71.13,10.85,0.09,0.08,2.93,1.02,0,"1 nonsynonymous","N64H",1
"lib1","SARS-CoV-2","CCTTATAATCTAACAT",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I C49Y",2
"lib1","SARS-CoV-2","CCTTATAGACAATAAT",1,10.53,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D90N N110V L125F E135P T140S",5
"lib1","SARS-CoV-2","CCTTATAGCAGTTCAT",5,61.65,10.82,0.05,0.09,2.86,1.09,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","CCTTATAGGCTCTCTT",9,280.84,9.01,-1.75,0.07,2.87,1.1,0,">1 nonsynonymous","C61E N157A P197L",3
"lib1","SARS-CoV-2","CCTTATAGTCAAAATC",4,87.6,9.87,-0.9,0.04,2.87,1.06,0,">1 nonsynonymous","S43K Y119K",2
"lib1","SARS-CoV-2","CCTTATATAGTACCGG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","CCTTATATTCCTGTAT",4,31.5,6.48,-4.29,0.52,1.5,1.15,0.03,">1 nonsynonymous","A33G G83H A105P N120A S200Y",5
"lib1","SARS-CoV-2","CCTTATATTTAAATTA",7,6.01,6,-4.76,0.89,3,1.02,0,">1 nonsynonymous","K94D Y123S",2
"lib1","SARS-CoV-2","CCTTATCATACTATCT",6,46.48,7.67,-3.1,0.3,1.5,1.14,0.03,">1 nonsynonymous","P54L A105L T170G",3
"lib1","SARS-CoV-2","CCTTATCCCTGAAGAA",3,21.2,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V32A G86L Y121F G152N Q168F",5
"lib1","SARS-CoV-2","CCTTATCCTCGAAGCT",1,6.54,9.63,-1.14,0.47,1.5,1,0.08,">1 nonsynonymous","N4H V103A",2
"lib1","SARS-CoV-2","CCTTATGACAAGGGCG",4,16.02,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","T3V N58P L95K G152S Q168D Y175C",6
"lib1","SARS-CoV-2","CCTTATGATGAAAGAA",2,8.02,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49V T63P G146T",3
"lib1","SARS-CoV-2","CCTTATGCAATAGGTA",2,16.31,7.09,-3.67,0.51,1.5,1.02,0.06,">1 nonsynonymous","S41F T55L C61F Q84R Y143E T148I",6
"lib1","SARS-CoV-2","CCTTATGCCGATTATC",1,1.17,NA,NA,NA,NA,NA,NA,"stop","Y39W N120* S147W L183G P197L",5
"lib1","SARS-CoV-2","CCTTATGGAAGCACTG",1,28.6,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","Y93S F99V K199L",3
"lib1","SARS-CoV-2","CCTTATTACGCAGTTA",11,24.12,9.21,-1.56,0.27,1.5,1.05,0.04,">1 nonsynonymous","I2S A33L Y91V K114R Y123L",5
"lib1","SARS-CoV-2","CCTTATTAGGTTTACC",3,83.17,8.41,-2.36,0.17,2.88,1.05,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","CCTTATTCAAAACCTT",3,101.15,10.58,-0.19,0.03,2.94,1,0,"1 nonsynonymous","L122D",1
"lib1","SARS-CoV-2","CCTTATTCTTTGGGTG",2,27.79,6.64,-4.13,0.49,1.5,1.11,0.04,">1 nonsynonymous","D34Q D90H I104A T140A",4
"lib1","SARS-CoV-2","CCTTATTTAACGAATA",2,62.52,10.71,-0.06,0.05,2.86,1.05,0,"1 nonsynonymous","T148G",1
"lib1","SARS-CoV-2","CCTTATTTAAGTCAAA",5,5.84,NA,NA,NA,NA,NA,NA,"stop","Y35G N64* D98T R124S N151*",5
"lib1","SARS-CoV-2","CCTTCAAAAGGTTGGA",2,1.24,NA,NA,NA,NA,NA,NA,"stop","N92G K198*",2
"lib1","SARS-CoV-2","CCTTCAAAAGTAAACA",3,76.75,8.34,-2.42,0.21,2.08,1.08,0.02,">1 nonsynonymous","D98R F126I G155C",3
"lib1","SARS-CoV-2","CCTTCAAACTTATCAA",17,220.08,10.78,0.01,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTCAAGAACCAATA",4,84.3,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37C P161R",2
"lib1","SARS-CoV-2","CCTTCAAGCGACTGTC",2,32.38,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G9K G51I E141T G172S",4
"lib1","SARS-CoV-2","CCTTCAAGTGCACGCT",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E L57A F126K",3
"lib1","SARS-CoV-2","CCTTCAATAACGGTAG",2,66.82,9.42,-1.35,0.08,2.64,1.07,0,">1 nonsynonymous","D90H N118Q",2
"lib1","SARS-CoV-2","CCTTCAATACCTGTTA",1,32.57,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N64L D90V D112R S147C",4
"lib1","SARS-CoV-2","CCTTCAATTAATTTTC",2,21.04,10.1,-0.66,0.13,2.34,1,0,">1 nonsynonymous","W106S K198R",2
"lib1","SARS-CoV-2","CCTTCACCGAATTATC",2,34.86,8.69,-2.07,0.15,1.95,1.13,0.01,">1 nonsynonymous","Y39H K56N Q176K",3
"lib1","SARS-CoV-2","CCTTCACTAAGTCACA",1,75.1,8.98,-1.78,0.07,2.64,1.09,0,">1 nonsynonymous","V52P Y119F V173E",3
"lib1","SARS-CoV-2","CCTTCAGCGTAATAGA",1,13.62,10.74,-0.03,0.06,3,1,0,">1 nonsynonymous","E10S N151K",2
"lib1","SARS-CoV-2","CCTTCAGTTACTCAAG",3,24.72,9.96,-0.8,0.19,1.89,1.11,0.02,">1 nonsynonymous","N4L V32K K128G G152Y",4
"lib1","SARS-CoV-2","CCTTCAGTTGACGCTG",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V C61G G86L F167I",4
"lib1","SARS-CoV-2","CCTTCATAGCCGCACC",5,9.56,7.02,-3.75,0.48,1.5,1,0.06,">1 nonsynonymous","R27K S41A N58K T63S L131I G152H N171L V180T",8
"lib1","SARS-CoV-2","CCTTCATCAAGTCTTT",10,178.81,10.69,-0.08,0.05,2.89,1.06,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","CCTTCATGACAATTCA",2,32.4,6,-4.76,1.94,1.5,1.23,0.03,">1 nonsynonymous","C6R Y39T N109S E154L",4
"lib1","SARS-CoV-2","CCTTCATGCATTTGTG",7,155.39,10.7,-0.06,0.08,2.9,1.06,0,"1 nonsynonymous","S129K",1
"lib1","SARS-CoV-2","CCTTCATTACATATTC",4,23.76,10.8,0.04,0.13,2.9,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTTCCACACGCCCAA",7,70.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N G101Y S113A R127K I142S",5
"lib1","SARS-CoV-2","CCTTCCAGACATGAAA",1,43.66,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","I2K N30A F167A P197L",4
"lib1","SARS-CoV-2","CCTTCCAGCCTAAGAA",13,160.18,10.51,-0.26,0.04,2.87,1.06,0,">1 nonsynonymous","D98A S147P G155S T201S",4
"lib1","SARS-CoV-2","CCTTCCCGCAGTATGC",2,62.45,10.07,-0.69,0.08,2.56,1.03,0,">1 nonsynonymous","E10K F12L V173Y",3
"lib1","SARS-CoV-2","CCTTCCTACTATACAT",1,6.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T D112M L122V Y143Q T148Y G172A",6
"lib1","SARS-CoV-2","CCTTCCTGACTAAACA",4,66.38,10.79,0.03,0.08,2.97,1.01,0,">1 nonsynonymous","V37P S53D",2
"lib1","SARS-CoV-2","CCTTCCTGCCTAGGTT",4,73.25,9.99,-0.77,0.07,2.29,1.02,0,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","CCTTCCTGCGCTATAA",5,32.87,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V11C T15Y Y39E K48M R127F G152V",6
"lib1","SARS-CoV-2","CCTTCGAATCTCTATA",1,17.46,10.15,-0.62,0.21,2.4,1.09,0.02,">1 nonsynonymous","T85R P96H S184C",3
"lib1","SARS-CoV-2","CCTTCGACGCACGGCT",1,12.08,6.39,-4.37,0.59,1.5,1.09,0.04,">1 nonsynonymous","S41V C49E V115S Y165V",4
"lib1","SARS-CoV-2","CCTTCGATTAGACTAG",1,61.29,10.18,-0.59,0.06,2.92,1.01,0,">1 nonsynonymous","I2N Q168T",2
"lib1","SARS-CoV-2","CCTTCGCAAACCCCTG",4,75.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11C R16T S36I T46Y A81L A89F Y121S S147G",8
"lib1","SARS-CoV-2","CCTTCGCATCGAAAAG",4,21.12,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19Y F134Y P149L Q168K K198I",5
"lib1","SARS-CoV-2","CCTTCGCGATTGAGCT",4,7.27,NA,NA,NA,NA,NA,NA,"stop","N13V F62G N107* R136K P149L F156K",6
"lib1","SARS-CoV-2","CCTTCGGCAATTAAGT",3,0.74,NA,NA,NA,NA,NA,NA,"stop","L122N P133L F156Q P197*",4
"lib1","SARS-CoV-2","CCTTCGGCTTTATGGC",1,17.67,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1G N107F E135C Y165N",4
"lib1","SARS-CoV-2","CCTTCGGGCAGGATAA",8,63.56,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","G9T N24T I72N G86C",4
"lib1","SARS-CoV-2","CCTTCGTTGATAACTT",1,106.28,10.4,-0.36,0.03,2.89,1.02,0,"1 nonsynonymous","N107P",1
"lib1","SARS-CoV-2","CCTTCTAAACTTCGTA",9,104.64,7.41,-3.35,0.19,1.5,1.09,0.01,">1 nonsynonymous","N30I S45F L125N S129I",4
"lib1","SARS-CoV-2","CCTTCTAACACCCCCC",8,82.83,10.03,-0.73,0.07,2.66,1.08,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","CCTTCTAAGAGCCCGT",2,11.13,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","N4M T15V G146P",3
"lib1","SARS-CoV-2","CCTTCTAATCAAACAA",5,116.02,9.49,-1.27,0.14,1.73,1.13,0.01,">1 nonsynonymous","V11N C61G",2
"lib1","SARS-CoV-2","CCTTCTACCATCACGC",1,0,NA,NA,NA,NA,NA,NA,"stop","A18* C31L Q84S",3
"lib1","SARS-CoV-2","CCTTCTACCATCAGGG",9,38.95,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F70I V77T E141S",3
"lib1","SARS-CoV-2","CCTTCTACTATACACG",5,22.72,6,-4.76,0.94,1.5,1.11,0.01,">1 nonsynonymous","E10R R25G L122G",3
"lib1","SARS-CoV-2","CCTTCTACTCAACCAC",5,151.6,10.79,0.03,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTTCTAGAAGTAAAG",7,53.05,10.77,0.01,0.06,2.93,1.03,0,">1 nonsynonymous","L5V T148H",2
"lib1","SARS-CoV-2","CCTTCTAGGTACTCGG",2,18.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30R N107G R127E F167D",4
"lib1","SARS-CoV-2","CCTTCTATGGGTCCAG",4,75.4,10.66,-0.11,0.05,2.82,1.03,0,">1 nonsynonymous","D90N K199L",2
"lib1","SARS-CoV-2","CCTTCTCAAAATGAAG",2,28.98,6.83,-3.93,0.45,1.67,1.15,0.03,"1 nonsynonymous","Y159D",1
"lib1","SARS-CoV-2","CCTTCTGAACAAAAAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","CCTTCTGATACCCTCA",1,23.41,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F99K P133I Y159S G174T",4
"lib1","SARS-CoV-2","CCTTCTGCTCGTCCCC",2,58.82,6.4,-4.36,0.45,1.5,1.15,0.02,"1 nonsynonymous","Y93K",1
"lib1","SARS-CoV-2","CCTTCTGTAGAAAACA",3,33.05,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V65P Y165Q",2
"lib1","SARS-CoV-2","CCTTCTTCAGCATCAC",1,7.19,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","D97F C102R",2
"lib1","SARS-CoV-2","CCTTGAAAAGACGTGC",3,1.95,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","CCTTGAACGGCCAATC",5,76.05,10.73,-0.03,0.09,2.8,1.12,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","CCTTGAAGTTCCAACA",2,46.87,10.1,-0.66,0.08,2.87,1.02,0,"1 nonsynonymous","S108G",1
"lib1","SARS-CoV-2","CCTTGAATAAAACCTA",14,69.87,6.29,-4.47,0.81,1.5,1.29,0.03,">1 nonsynonymous","P7S S53R P96Y D98G",4
"lib1","SARS-CoV-2","CCTTGACAGGAAGTAT",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T P133N",2
"lib1","SARS-CoV-2","CCTTGACAGGCTCGCC",7,133.84,10.79,0.02,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTGACGAGAAATAT",5,53.31,6.23,-4.53,0.89,1.5,1.24,0.04,">1 nonsynonymous","A14R V37D G86K L125F P197L",5
"lib1","SARS-CoV-2","CCTTGACGCAAGATTT",3,8.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34I N64K T85W L95R Y123F G174S T193I",7
"lib1","SARS-CoV-2","CCTTGACTCTAAAAAT",2,38.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N40D T55V P133A Y178G",4
"lib1","SARS-CoV-2","CCTTGAGCATATTACG",2,87.7,9.84,-0.92,0.05,2.96,1,0,">1 nonsynonymous","V32Q Y35L N171G",3
"lib1","SARS-CoV-2","CCTTGAGGATTGCTGA",4,41.88,8.4,-2.37,0.27,1.5,1.12,0.03,">1 nonsynonymous","D59V D98L Y123V",3
"lib1","SARS-CoV-2","CCTTGAGTAAACCCCC",6,38.03,6.41,-4.35,0.69,1.5,1.17,0.03,">1 nonsynonymous","K26M G86T L95M",3
"lib1","SARS-CoV-2","CCTTGATGCAACATAT",3,23.54,10.8,0.04,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTGATGTTAGGAAA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K A42P Y123S K199L",4
"lib1","SARS-CoV-2","CCTTGATTCCACATCA",2,30.37,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V11P C49S T201S",3
"lib1","SARS-CoV-2","CCTTGCAAAAACAAAT",6,66.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K94L R136G",2
"lib1","SARS-CoV-2","CCTTGCACACTACAGC",7,61.36,9.4,-1.36,0.14,2.18,1.11,0.01,">1 nonsynonymous","S45L K114E Q144S",3
"lib1","SARS-CoV-2","CCTTGCATTGGAAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y A145F Y175D",3
"lib1","SARS-CoV-2","CCTTGCCCGACTCTGA",4,1.89,NA,NA,NA,NA,NA,NA,"stop","C6* R16S E76T K87L N118L F126S Q176K",7
"lib1","SARS-CoV-2","CCTTGCCTATTGACTA",1,1.16,NA,NA,NA,NA,NA,NA,"stop","T46* K56S",2
"lib1","SARS-CoV-2","CCTTGCCTGAAATTAT",11,263.4,10.7,-0.07,0.03,2.87,1.05,0,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","CCTTGCGAACGAAACT",7,346.2,10.71,-0.05,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTGCGATGCGTATT",5,276.53,8.69,-2.07,0.13,1.5,1.06,0.01,">1 nonsynonymous","F44V L131A",2
"lib1","SARS-CoV-2","CCTTGCGCAGTCACAG",5,122.58,9.97,-0.8,0.04,2.91,1,0,"1 nonsynonymous","L125V",1
"lib1","SARS-CoV-2","CCTTGCGGACGTGAAA",11,168.78,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8C F99L",2
"lib1","SARS-CoV-2","CCTTGCTACCGCTACG",9,51.67,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","R25E P96S",2
"lib1","SARS-CoV-2","CCTTGCTGCGAATCAT",2,49.71,9.41,-1.35,0.13,1.64,1.08,0.01,">1 nonsynonymous","K26W D34V",2
"lib1","SARS-CoV-2","CCTTGGATGATTATCC",6,2.11,NA,NA,NA,NA,NA,NA,"stop","C61* G146R",2
"lib1","SARS-CoV-2","CCTTGGCAACGGGTCC",5,59.18,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44I N58S D90G Q176R S200I",5
"lib1","SARS-CoV-2","CCTTGGCAAGATCACC",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60W Q163L P191N",3
"lib1","SARS-CoV-2","CCTTGGCCTTTCTAAG",3,10.75,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9Q F70L D90T K128N F134T K198N",6
"lib1","SARS-CoV-2","CCTTGGCTAGAGCTTG",3,105.75,10.67,-0.09,0.05,2.91,1.05,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","CCTTGGGAAAATCTGT",1,65.77,9.76,-1,0.12,2.4,1.07,0,">1 nonsynonymous","Y50F Y91A",2
"lib1","SARS-CoV-2","CCTTGGGACGTACACG",2,17.95,9.85,-0.91,0.32,1.77,1.02,0.04,">1 nonsynonymous","F8L V52D S139R",3
"lib1","SARS-CoV-2","CCTTGGTCACTATTAA",5,117.31,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F47K D112I Y178I",3
"lib1","SARS-CoV-2","CCTTGGTCAGGCAATG",5,23.52,6.03,-4.73,1.38,1.5,1.15,0.03,">1 nonsynonymous","C49S P161G",2
"lib1","SARS-CoV-2","CCTTGTAAGTGTACTT",1,9.12,9.12,-1.64,0.26,1.5,1.09,0.05,">1 nonsynonymous","K56L T85V L95C",3
"lib1","SARS-CoV-2","CCTTGTAATTTCTAAA",9,35.91,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","I2T Y91T D98I F156V V182T",5
"lib1","SARS-CoV-2","CCTTGTACATAGCCGA",15,282.91,10.68,-0.09,0.05,2.89,1.06,0,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","CCTTGTCTTCTCAACA",13,46.66,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N1I C158F P161K V182F",4
"lib1","SARS-CoV-2","CCTTGTGTAATAAAAT",5,57.27,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35E R127H V173S",3
"lib1","SARS-CoV-2","CCTTGTTGATTAATTA",6,45.2,7.43,-3.33,0.3,1.5,1.13,0.02,">1 nonsynonymous","C6L S19K",2
"lib1","SARS-CoV-2","CCTTTAAAAAATCGTT",3,82.59,10.02,-0.74,0.09,2.85,1,0,">1 nonsynonymous","Y35C E141G",2
"lib1","SARS-CoV-2","CCTTTAAAACCTGGCC",1,17.17,8.84,-1.92,0.18,1.51,1.23,0.02,">1 nonsynonymous","V71A L122S Q144T K199N",4
"lib1","SARS-CoV-2","CCTTTAAAACGAACAT",25,207.9,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y93K N107T T201L",3
"lib1","SARS-CoV-2","CCTTTAAAATATAGTG",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L K114R Y178S",3
"lib1","SARS-CoV-2","CCTTTAAATAAGCGAT",4,60.47,6.21,-4.55,0.51,1.5,1.13,0.01,">1 nonsynonymous","I28W Y39R K56T D98L G101D K199H",6
"lib1","SARS-CoV-2","CCTTTAACACAGAGAT",3,39.46,10.38,-0.38,0.06,2.94,1.02,0,">1 nonsynonymous","Y39H C61N V103I",3
"lib1","SARS-CoV-2","CCTTTAAGATTTATGC",4,43.83,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G146L V173T",2
"lib1","SARS-CoV-2","CCTTTAAGCTAAAAGT",8,218.32,9.57,-1.19,0.08,2.74,1.11,0,">1 nonsynonymous","E154V Y178S",2
"lib1","SARS-CoV-2","CCTTTAAGGGAATACT",2,34.82,10.11,-0.65,0.08,2.61,1.01,0,">1 nonsynonymous","G9Y E135Y K198L",3
"lib1","SARS-CoV-2","CCTTTAATACCCATTT",9,50.75,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","L95Y T148N",2
"lib1","SARS-CoV-2","CCTTTAATAGAGTCGA",3,43.13,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12T V37G A42F L122W S129N C150W",6
"lib1","SARS-CoV-2","CCTTTACCCCAATGAG",1,47.78,10.37,-0.4,0.06,2.94,1,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","CCTTTACGTTTTCCAC",3,44.15,10.67,-0.09,0.08,2.84,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTTAGAATAGACGA",2,10.55,10.67,-0.1,0.13,2.74,1.17,0.01,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","CCTTTAGACACTTAAT",7,0.34,NA,NA,NA,NA,NA,NA,"stop","D90L P96* Y119H",3
"lib1","SARS-CoV-2","CCTTTAGCGCCGAATG",3,39.31,6,-4.76,0.57,3,1.14,0,">1 nonsynonymous","S19W S43F L162S",3
"lib1","SARS-CoV-2","CCTTTAGTACCTACTG",8,42.95,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","C6I Y21E I142A",3
"lib1","SARS-CoV-2","CCTTTAGTTCGACGCG",3,6.59,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T3P G101D E135V S184Y",4
"lib1","SARS-CoV-2","CCTTTATACAATACAT",4,62.32,10.02,-0.74,0.14,2.54,1.03,0.01,">1 nonsynonymous","A42I D59I",2
"lib1","SARS-CoV-2","CCTTTATACGAAGTAC",1,10.69,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14H C61S D112G T170C",4
"lib1","SARS-CoV-2","CCTTTATCATGATAGA",4,19.19,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A89S I104R",2
"lib1","SARS-CoV-2","CCTTTATGAACCGAGG",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R N30Y N40Q",3
"lib1","SARS-CoV-2","CCTTTCAAGCGCATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","T55G L122* R136V T201R",4
"lib1","SARS-CoV-2","CCTTTCACAAAAAAGC",1,24.85,10.89,0.12,0.14,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTTCACATATGGAT",10,78.28,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V20Y I138Q C158T L188H",4
"lib1","SARS-CoV-2","CCTTTCATTTCTATAC",2,31.85,10.69,-0.08,0.1,2.85,1.14,0,"synonymous","",0
"lib1","SARS-CoV-2","CCTTTCCATACTAATT",4,7.8,6.22,-4.55,2,1.5,1.19,0.04,">1 nonsynonymous","D34K Q84Y G146P T170V T201K",5
"lib1","SARS-CoV-2","CCTTTCCATTACACTC",7,29.35,7.99,-2.78,0.45,1.5,1,0.07,">1 nonsynonymous","F8N T15P L57A F99Y",4
"lib1","SARS-CoV-2","CCTTTCCGAGATTTTA",3,5.7,6,-4.76,2,2.57,1.04,0,">1 nonsynonymous","D90P D112W N118L",3
"lib1","SARS-CoV-2","CCTTTCGGACTTCCCA",8,176.8,10.72,-0.04,0.05,2.92,1.06,0,"1 nonsynonymous","V173D",1
"lib1","SARS-CoV-2","CCTTTCTCCCTTAAAA",4,20.5,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","E10H F70W E154Y",3
"lib1","SARS-CoV-2","CCTTTCTGTACGCAGA",4,0.48,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","CCTTTGAATTATCCAC",6,52.94,10.73,-0.04,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CCTTTGAGTAGCTACC",10,92.71,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y50K I88R T100L A105V",4
"lib1","SARS-CoV-2","CCTTTGATCAATAATG",12,145.83,10.46,-0.3,0.04,2.8,1.04,0,">1 nonsynonymous","P7R A33S",2
"lib1","SARS-CoV-2","CCTTTGCCGGTATAAA",4,55.2,10.78,0.02,0.13,2.87,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CCTTTGCGCATATGGT",4,85.83,10.79,0.02,0.06,2.96,1.01,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","CCTTTGCGTGATTGAA",3,36.54,9.12,-1.64,0.24,2.51,1.12,0.02,">1 nonsynonymous","L95M G117D",2
"lib1","SARS-CoV-2","CCTTTGGAACCAGAAA",2,20.39,9.14,-1.63,0.32,1.5,1,0.05,">1 nonsynonymous","C6R S69N S129R",3
"lib1","SARS-CoV-2","CCTTTGGGTGTTTAAT",11,5.61,NA,NA,NA,NA,NA,NA,"stop","Y93* S113A",2
"lib1","SARS-CoV-2","CCTTTGTATAATTAAG",6,76.53,10.31,-0.46,0.04,2.89,1.02,0,">1 nonsynonymous","R16L C61T S129P",3
"lib1","SARS-CoV-2","CCTTTGTGTAAATGCG",14,202.38,9.82,-0.95,0.08,2.11,1.06,0,">1 nonsynonymous","Y66R T85C",2
"lib1","SARS-CoV-2","CCTTTTACAAAATTAC",6,1.47,NA,NA,NA,NA,NA,NA,"stop","C49V T148V S200*",3
"lib1","SARS-CoV-2","CCTTTTAGCAACTATT",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33F S45K P161H T170S",4
"lib1","SARS-CoV-2","CCTTTTATAAAGTTAT",3,0.85,NA,NA,NA,NA,NA,NA,"stop","F47S T55L C61* D98G E154Q",5
"lib1","SARS-CoV-2","CCTTTTATAGACACTG",11,66.83,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y165C R179I",2
"lib1","SARS-CoV-2","CCTTTTCCATCACCAG",1,34.89,10.14,-0.63,0.08,2.79,1.01,0,">1 nonsynonymous","Q84I Y91M",2
"lib1","SARS-CoV-2","CCTTTTCGAACAAAAA",2,50.86,9.08,-1.68,0.19,1.5,1.15,0.02,">1 nonsynonymous","A89P W106V",2
"lib1","SARS-CoV-2","CCTTTTCTACCGCTAC",1,31.33,9.5,-1.27,0.28,1.5,1,0.04,">1 nonsynonymous","S139L T148C L183M",3
"lib1","SARS-CoV-2","CCTTTTGAAAGCACGC",6,85.31,7.61,-3.16,0.19,1.5,1.13,0.01,">1 nonsynonymous","Y91D S129G C195A K199I",4
"lib1","SARS-CoV-2","CCTTTTGAGCGTCTAC",11,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L E135V F167L",3
"lib1","SARS-CoV-2","CCTTTTGATAATGGGT",2,58.49,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","S36Y V37C F99L W106V D112S K128L",6
"lib1","SARS-CoV-2","CCTTTTGCCCAAGCAT",5,21.71,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55F K94D V103P P133L",4
"lib1","SARS-CoV-2","CCTTTTGCCCGACGAC",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K S45D",2
"lib1","SARS-CoV-2","CCTTTTGCCGGGTATA",1,0.29,NA,NA,NA,NA,NA,NA,"stop","L5R L122*",2
"lib1","SARS-CoV-2","CCTTTTGGATACCGGG",8,91.04,10.6,-0.16,0.04,2.92,1.01,0,">1 nonsynonymous","S41A D97I",2
"lib1","SARS-CoV-2","CCTTTTGGTTGAGCGA",18,257.05,6.78,-3.98,0.17,1.5,1.14,0,">1 nonsynonymous","Y143N G152F",2
"lib1","SARS-CoV-2","CCTTTTGTTTAAATTA",5,91.98,10.04,-0.73,0.05,2.72,1.05,0,"1 nonsynonymous","S19Q",1
"lib1","SARS-CoV-2","CCTTTTTAACAGACTC",2,98.75,10.8,0.03,0.06,2.92,1.04,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","CCTTTTTATAGTGGAA",1,11.25,NA,NA,NA,NA,NA,NA,"stop","I28* Y35G T55H W106G",4
"lib1","SARS-CoV-2","CCTTTTTATTCTCTTA",5,54.33,10.7,-0.06,0.14,2.76,1.21,0.01,"1 nonsynonymous","Q163V",1
"lib1","SARS-CoV-2","CCTTTTTTCCATGGCT",2,87.58,10.04,-0.73,0.04,2.94,1.01,0,">1 nonsynonymous","R73S I138T",2
"lib1","SARS-CoV-2","CCTTTTTTCGAAAATC",1,13.85,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V32L K56L D98Y Y121I C150R",5
"lib1","SARS-CoV-2","CCTTTTTTTATGCTAG",6,102,10.74,-0.03,0.05,2.91,1.07,0,"1 nonsynonymous","K198W",1
"lib1","SARS-CoV-2","CGAAAAAAACAAATTA",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N107E I138G P149N",4
"lib1","SARS-CoV-2","CGAAAAAAACACAGCA",2,38.18,8.49,-2.27,0.2,1.6,1.16,0.02,">1 nonsynonymous","W23S K87N",2
"lib1","SARS-CoV-2","CGAAAAAAATTTACTA",6,148.45,10.17,-0.6,0.04,2.89,1.03,0,">1 nonsynonymous","T55Y D97R G174T",3
"lib1","SARS-CoV-2","CGAAAAAACGTATACG",1,22.61,7.39,-3.38,0.38,1.5,1.1,0.06,">1 nonsynonymous","T100Q I104M E154Y V180M",4
"lib1","SARS-CoV-2","CGAAAAAAGCTTGCTA",3,67.85,6.76,-4,0.29,1.5,1.17,0.02,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","CGAAAAAAGTCTAAAC",6,87.59,9.83,-0.94,0.11,2.2,1.06,0,">1 nonsynonymous","L5W V181L",2
"lib1","SARS-CoV-2","CGAAAAAAGTGGGACG",4,67.53,9.67,-1.09,0.1,2.37,1.09,0,">1 nonsynonymous","S19M S41F",2
"lib1","SARS-CoV-2","CGAAAAAATAAATTAT",5,58.98,9.62,-1.14,0.09,1.99,1.06,0,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","CGAAAAAATAGACATA",7,95.34,8.46,-2.31,0.11,1.68,1.13,0,">1 nonsynonymous","V37L K87A R136G N171S",4
"lib1","SARS-CoV-2","CGAAAAAATCGCGTTG",7,28.48,6.05,-4.71,1.06,1.5,1.14,0.03,">1 nonsynonymous","P7S I88L N107R G152D S200F",5
"lib1","SARS-CoV-2","CGAAAAAATTCTTAAA",6,48.07,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V103A I138M G146Q V180A",4
"lib1","SARS-CoV-2","CGAAAAACAAGCAACT",5,52.24,10.83,0.06,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAAAACAGAAGACA",1,13.89,6,-4.76,2,3,1.26,0.03,">1 nonsynonymous","G101L Y119L T140L Y159L P169R P191T",6
"lib1","SARS-CoV-2","CGAAAAACCATCTGAA",5,83.23,10.74,-0.02,0.05,2.92,1.05,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","CGAAAAACCTGCTCAT",9,162.71,8.38,-2.38,0.16,1.8,1.15,0.01,">1 nonsynonymous","R73V N151Y",2
"lib1","SARS-CoV-2","CGAAAAAGAGCGCCCA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","L162* Y178P",2
"lib1","SARS-CoV-2","CGAAAAATAAGAGTCA",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L W23V K56Q P96R",4
"lib1","SARS-CoV-2","CGAAAAATTAATGGAG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","N64* E76R D90S G146N",4
"lib1","SARS-CoV-2","CGAAAAATTCACGCAC",2,45.91,10.56,-0.2,0.07,2.87,1.05,0,">1 nonsynonymous","C61N S139N",2
"lib1","SARS-CoV-2","CGAAAAATTGTTTGAA",1,9.36,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y35M N58I I88Y",3
"lib1","SARS-CoV-2","CGAAAACACAGATTAA",6,71.5,8.66,-2.11,0.18,1.85,1.16,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","CGAAAACAGCAGACTG",2,39.7,10.69,-0.07,0.06,2.92,1.02,0,">1 nonsynonymous","N4E G152Y T201Q",3
"lib1","SARS-CoV-2","CGAAAACATAACGAAT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114C E154D",2
"lib1","SARS-CoV-2","CGAAAACATACCTAAG",8,95.41,10.77,0,0.09,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAAACATGCAAGTC",4,8.37,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C6L C61F G86V D98L P161R",5
"lib1","SARS-CoV-2","CGAAAACCAAGTACAC",1,40.46,10.79,0.02,0.06,2.91,1.03,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","CGAAAACCGACAGCAT",3,18.5,7.07,-3.7,0.27,2.76,1.24,0.02,">1 nonsynonymous","C49L F99A G146C",3
"lib1","SARS-CoV-2","CGAAAACCTGGAGGGA",3,17.49,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S45C L95K F99Y N110G",4
"lib1","SARS-CoV-2","CGAAAACGACAAGATT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3W S19* L60C T201Q",4
"lib1","SARS-CoV-2","CGAAAACGTTAAAATT",3,33.24,6.03,-4.73,0.95,1.5,1.17,0.02,">1 nonsynonymous","G9I R25M D90G L95V V153C",5
"lib1","SARS-CoV-2","CGAAAACTAACCTAGT",1,5.81,9.89,-0.88,0.21,2.28,1.03,0.01,">1 nonsynonymous","K56T K94V T201M",3
"lib1","SARS-CoV-2","CGAAAACTACATTGAT",1,37.5,9.5,-1.26,0.12,2.5,1.05,0.01,">1 nonsynonymous","I2M R73L",2
"lib1","SARS-CoV-2","CGAAAACTCCTTCAGG",2,11.59,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6V S29P F99Y A145H",4
"lib1","SARS-CoV-2","CGAAAACTCGGTCCAT",6,48.98,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","R78V G101I F160D",3
"lib1","SARS-CoV-2","CGAAAACTTACCAATC",6,86.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K56P Y93I G166F S200Y",4
"lib1","SARS-CoV-2","CGAAAACTTATGAATG",3,61.61,9.47,-1.29,0.12,1.9,1.08,0.01,">1 nonsynonymous","E154M L162C",2
"lib1","SARS-CoV-2","CGAAAACTTGTACCGA",6,35.89,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y123I V182M",2
"lib1","SARS-CoV-2","CGAAAAGAGTACAATG",6,56.08,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6R R16S C150S",3
"lib1","SARS-CoV-2","CGAAAAGCAAATGGAC",2,30.4,10.53,-0.24,0.08,2.87,1,0,"1 nonsynonymous","Y123I",1
"lib1","SARS-CoV-2","CGAAAAGCAGTTATAC",3,13.94,6.28,-4.49,0.79,1.5,1.31,0.06,">1 nonsynonymous","F8I N107P D137V",3
"lib1","SARS-CoV-2","CGAAAAGCCTTTGTGA",1,9.73,9.86,-0.91,0.12,2.7,1.07,0.01,">1 nonsynonymous","C61A P161S",2
"lib1","SARS-CoV-2","CGAAAAGTTACAATCG",4,47.91,10.15,-0.61,0.1,2.11,1.07,0,">1 nonsynonymous","N1Y N30I",2
"lib1","SARS-CoV-2","CGAAAAGTTCGCTGGA",1,19.68,10.61,-0.15,0.02,2.99,1,0,">1 nonsynonymous","A42T P149H",2
"lib1","SARS-CoV-2","CGAAAAGTTCTTCAAG",3,18.7,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","L95S N118P N171Y P197T T201M",5
"lib1","SARS-CoV-2","CGAAAATAATGTGTCT",6,59.31,9.25,-1.51,0.18,1.63,1.08,0.02,">1 nonsynonymous","W23L A190E T201Y",3
"lib1","SARS-CoV-2","CGAAAATACAAAATTA",14,12.18,NA,NA,NA,NA,NA,NA,"stop","R27L K56* Q84A",3
"lib1","SARS-CoV-2","CGAAAATACACGCGGA",1,512.17,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","N92G Y119F C158I",3
"lib1","SARS-CoV-2","CGAAAATATAACTAGT",3,10.81,6.14,-4.62,2,1.5,1.18,0.01,">1 nonsynonymous","C49L I104G",2
"lib1","SARS-CoV-2","CGAAAATATCCGAATT",1,6.16,6,-4.76,2,1.5,1.1,0.05,">1 nonsynonymous","R25D Q84S D112I",3
"lib1","SARS-CoV-2","CGAAAATCCACGCCCA",4,35.96,9.93,-0.84,0.07,2.79,1.05,0,">1 nonsynonymous","T3Q F160C P169L",3
"lib1","SARS-CoV-2","CGAAAATCCATTGAAG",3,41.92,10.86,0.09,0.07,2.93,1.04,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","CGAAAATGATTATGAG",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K D75T A105D D112C S139C",5
"lib1","SARS-CoV-2","CGAAAATGCGCTACTT",1,7.79,10.64,-0.13,0.17,2.66,1.24,0.01,">1 nonsynonymous","S41W T46H",2
"lib1","SARS-CoV-2","CGAAAATGGCACATGA",2,31.45,10.75,-0.01,0.04,2.97,1,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","CGAAAATGTTCGTTTG",5,36.77,6.15,-4.61,0.84,1.5,1.14,0.03,">1 nonsynonymous","T15N T85N Y165S",3
"lib1","SARS-CoV-2","CGAAAATTAATGTGAG",5,85.33,10.59,-0.18,0.04,2.94,1.01,0,">1 nonsynonymous","G9T D90R",2
"lib1","SARS-CoV-2","CGAAAATTATCTTAAG",5,39.39,6,-4.76,2,3,1.08,0,">1 nonsynonymous","A42G K56W K87R K132D L162D",5
"lib1","SARS-CoV-2","CGAAAATTTCCTATGT",4,82.74,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7L K114D Q176W",3
"lib1","SARS-CoV-2","CGAAACAAATACTGAA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q F12A T85V K128L V182S T201Q",6
"lib1","SARS-CoV-2","CGAAACAACAATTATA",2,10.37,10.36,-0.41,0.12,2.8,1,0.01,">1 nonsynonymous","P7T D98H V173Y",3
"lib1","SARS-CoV-2","CGAAACAAGGTTTTTT",1,5.42,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","T3V F17C V37C S43Y N107K Y165C Y178V",7
"lib1","SARS-CoV-2","CGAAACAATTGCGGTT",2,0.47,NA,NA,NA,NA,NA,NA,"stop","S29I G51* D98S R136T S184T",5
"lib1","SARS-CoV-2","CGAAACACATACAATC",1,20,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","R16N G83P P96W",3
"lib1","SARS-CoV-2","CGAAACACGCAATAGA",3,13.93,6.91,-3.85,0.49,3,1.23,0.02,">1 nonsynonymous","C49S L60M Y123E",3
"lib1","SARS-CoV-2","CGAAACACGGCTAGAG",6,0.6,NA,NA,NA,NA,NA,NA,"stop","S53Y P82E D90F I104R N110*",5
"lib1","SARS-CoV-2","CGAAACAGTTCAAACA",2,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A T100D L125G G146Y",4
"lib1","SARS-CoV-2","CGAAACATAAAGTCTG",11,69.4,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9Q T15S W23M K48C A192S",5
"lib1","SARS-CoV-2","CGAAACCACAATGACC",4,39.76,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","T3Y R16M P96S S108T Y123M Y165D H189F",7
"lib1","SARS-CoV-2","CGAAACCACGGCAGGA",3,1.28,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","CGAAACCACTTATGAC",6,0.79,NA,NA,NA,NA,NA,NA,"stop","K56* P82E T100V V173F S200N",5
"lib1","SARS-CoV-2","CGAAACCCAATACAGA",1,6.67,8.46,-2.31,0.25,2.72,1.21,0.03,">1 nonsynonymous","S41N D112S",2
"lib1","SARS-CoV-2","CGAAACCCCCCTCTTA",2,12.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7Q A14V G86S I142S",4
"lib1","SARS-CoV-2","CGAAACCCCCTGTAAC",2,30.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94M N157W G172S",3
"lib1","SARS-CoV-2","CGAAACCCCTCCCTAG",2,25.02,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N30T V37W A42Q P54G R73E T100Y",6
"lib1","SARS-CoV-2","CGAAACCGTTAACGAC",2,33.45,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","T100E Y165K",2
"lib1","SARS-CoV-2","CGAAACCTTCAAGTTG",12,8.78,NA,NA,NA,NA,NA,NA,"stop","T55R K87* F99S",3
"lib1","SARS-CoV-2","CGAAACCTTGCAAGAG",5,105.33,10.78,0.01,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAACCTTGGAAACC",2,19.38,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T63N Y91L T148R F167G",4
"lib1","SARS-CoV-2","CGAAACGACGGCCGTA",5,28.82,7.34,-3.42,0.43,1.5,1.16,0.06,">1 nonsynonymous","W23K V52L N120Y",3
"lib1","SARS-CoV-2","CGAAACGATAAATACA",2,80.64,6.85,-3.91,0.24,1.5,1.17,0.01,">1 nonsynonymous","G152Y P161C",2
"lib1","SARS-CoV-2","CGAAACGATTAATAAA",1,20.39,9.35,-1.42,0.26,1.57,1.24,0.03,">1 nonsynonymous","L5I S36D L57K T85L",4
"lib1","SARS-CoV-2","CGAAACGATTTTAAAA",4,19.79,6.33,-4.43,0.39,1.5,1.1,0.01,">1 nonsynonymous","L95N I142Y P149S E154P",4
"lib1","SARS-CoV-2","CGAAACGCGAAGTTCG",4,58.47,10.27,-0.49,0.07,2.82,1.08,0,">1 nonsynonymous","F44T E141S",2
"lib1","SARS-CoV-2","CGAAACGTACTATTTA",2,16.41,9.44,-1.33,0.16,2.53,1.05,0.01,">1 nonsynonymous","T15I P169N",2
"lib1","SARS-CoV-2","CGAAACGTTCAAGTGT",1,32.6,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N4I L38D Q176A",3
"lib1","SARS-CoV-2","CGAAACTAAGCAGAAT",2,47.24,10.48,-0.29,0.03,2.94,1.02,0,">1 nonsynonymous","Y119S Q163V",2
"lib1","SARS-CoV-2","CGAAACTACCACACAG",2,66.03,10.59,-0.17,0.05,2.97,1,0,">1 nonsynonymous","N1T K56C",2
"lib1","SARS-CoV-2","CGAAACTACCCCCAAC",1,2.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95K",1
"lib1","SARS-CoV-2","CGAAACTAGGATTGCT",14,91.81,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D112C R124P K199L",3
"lib1","SARS-CoV-2","CGAAACTCAAATCAAA",4,71.32,7.28,-3.48,0.23,1.5,1.07,0.01,"1 nonsynonymous","D112Q",1
"lib1","SARS-CoV-2","CGAAACTGAATGCAAA",5,26.73,9.2,-1.57,0.24,1.5,1.15,0.03,">1 nonsynonymous","V103C S200R",2
"lib1","SARS-CoV-2","CGAAACTTGACCTTTT",3,18.12,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D90L I104D L122S",3
"lib1","SARS-CoV-2","CGAAAGAAGCTAACCT",3,24.66,6.21,-4.56,0.73,1.5,1.22,0.02,">1 nonsynonymous","Y66W A81M Y121S F156S",4
"lib1","SARS-CoV-2","CGAAAGAGATGATAAC",1,30.53,9.92,-0.84,0.09,1.94,1.06,0,">1 nonsynonymous","N1K F8T N120G",3
"lib1","SARS-CoV-2","CGAAAGAGTTAAACCC",4,82.35,10.54,-0.22,0.04,2.93,1.03,0,">1 nonsynonymous","S41T D98A",2
"lib1","SARS-CoV-2","CGAAAGATAATGATTA",4,41.9,8.45,-2.32,0.21,1.56,1.1,0.02,">1 nonsynonymous","D97T G116C G155M",3
"lib1","SARS-CoV-2","CGAAAGATGGCAGGAA",3,41.02,10.73,-0.04,0.05,2.91,1.02,0,"1 nonsynonymous","T85D",1
"lib1","SARS-CoV-2","CGAAAGATGGGGTTAA",5,0.13,NA,NA,NA,NA,NA,NA,"stop","A42S Y50K P149A L188S K199*",5
"lib1","SARS-CoV-2","CGAAAGATTAAATCAC",2,72.85,10.74,-0.03,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAAGCACCCGACGG",9,76.43,8.89,-1.88,0.11,1.8,1.09,0.01,">1 nonsynonymous","G86S K128I T148K T201K",4
"lib1","SARS-CoV-2","CGAAAGCATGACGACT",6,56.51,8.56,-2.2,0.26,1.5,1.08,0.03,">1 nonsynonymous","F8P P169C",2
"lib1","SARS-CoV-2","CGAAAGCATTGGACAA",6,15.33,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","P96V V103L P149L",3
"lib1","SARS-CoV-2","CGAAAGCCAATGTATA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S43R I88* N109* K114I N120K",5
"lib1","SARS-CoV-2","CGAAAGCCTTAGTCAG",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Q N107S G117T",3
"lib1","SARS-CoV-2","CGAAAGCTGGCATACA",3,25.58,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44L Y50K N171S",3
"lib1","SARS-CoV-2","CGAAAGGAAAAGGTAG",4,9.97,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","I2F T15N K48N D90L N118H G146N V173R",7
"lib1","SARS-CoV-2","CGAAAGGAAGGGAAAC",3,21.41,6.97,-3.79,0.55,1.5,1.13,0.05,">1 nonsynonymous","D68K D98I F160Y",3
"lib1","SARS-CoV-2","CGAAAGGAGCTGTGGC",8,58.49,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L60I I88R",2
"lib1","SARS-CoV-2","CGAAAGGTACTCGGGA",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45H K94S K114C E141V P177E",5
"lib1","SARS-CoV-2","CGAAAGGTCTTTTCAA",8,49.5,7.7,-3.07,0.47,1.5,1.01,0.08,">1 nonsynonymous","I2R V11D K94V C102A C150M G174Q",6
"lib1","SARS-CoV-2","CGAAAGTAAATTCGAA",1,10.15,9.71,-1.05,0.24,1.92,1.06,0.02,">1 nonsynonymous","F8D V32A",2
"lib1","SARS-CoV-2","CGAAAGTAATTTAGTA",5,62.46,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L5A G86L D112G F156V",4
"lib1","SARS-CoV-2","CGAAAGTTATAATCTG",2,1.12,NA,NA,NA,NA,NA,NA,"stop","A33P D59C D98* F134P",4
"lib1","SARS-CoV-2","CGAAAGTTCCTTAAGT",1,9.8,6.04,-4.73,1.43,1.5,1.1,0.03,">1 nonsynonymous","L5R T85E D97I W106M R124L P169M",6
"lib1","SARS-CoV-2","CGAAATAAAAAACTTC",3,51.62,10.72,-0.05,0.07,2.93,1.04,0,">1 nonsynonymous","I28W Y35R",2
"lib1","SARS-CoV-2","CGAAATAAACTACGCG",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52Y R179I E186N",3
"lib1","SARS-CoV-2","CGAAATAAATAAAGTA",1,49.03,10.74,-0.02,0.08,2.8,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAATAACACCTCCA",4,0,NA,NA,NA,NA,NA,NA,"stop","C61* S139C",2
"lib1","SARS-CoV-2","CGAAATAACGAGCATA",1,25.86,9.62,-1.15,0.14,1.71,1.09,0.01,">1 nonsynonymous","V11M N120M I138H V181M",4
"lib1","SARS-CoV-2","CGAAATAAGCCGACAA",7,90.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23S Y35C G101T V153E P177V",5
"lib1","SARS-CoV-2","CGAAATAAGGTGATAA",4,99.84,9.23,-1.53,0.07,2.8,1.1,0,">1 nonsynonymous","V32M D97K F156C",3
"lib1","SARS-CoV-2","CGAAATAATGAGGTCC",6,30.31,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","E76K K94T N107R S200D",4
"lib1","SARS-CoV-2","CGAAATACACCCAATT",2,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59L",1
"lib1","SARS-CoV-2","CGAAATACACCGATAT",4,24.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113E T140L P161F",3
"lib1","SARS-CoV-2","CGAAATACCCCTCAAT",3,49.83,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V77E I88M V115I T140V",4
"lib1","SARS-CoV-2","CGAAATACTCATCGCT",2,8.5,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N30E N40C L57R G83S K94L",5
"lib1","SARS-CoV-2","CGAAATAGAAACGCTA",4,5.99,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3E A33G S53K V65P S129I",5
"lib1","SARS-CoV-2","CGAAATAGACTAAAAA",2,46.18,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T63G G86R L122E G146Y",4
"lib1","SARS-CoV-2","CGAAATAGCTCGCCCA",4,98.11,9.72,-1.04,0.11,2.22,1.08,0,">1 nonsynonymous","K94S E154V",2
"lib1","SARS-CoV-2","CGAAATAGCTTACATG",6,129.66,10.72,-0.04,0.07,2.9,1.07,0,">1 nonsynonymous","L5N N151L",2
"lib1","SARS-CoV-2","CGAAATAGCTTAGTTA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","CGAAATAGTAAGATCT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F F99Y",2
"lib1","SARS-CoV-2","CGAAATAGTGTGATCA",8,174.53,8.84,-1.93,0.08,2.73,1.11,0,">1 nonsynonymous","C61K D90R G174V",3
"lib1","SARS-CoV-2","CGAAATATCAGTATTG",4,50.06,9.91,-0.85,0.1,2.27,1.05,0,">1 nonsynonymous","V37P S69W",2
"lib1","SARS-CoV-2","CGAAATATCATGTGGT",1,14.02,6.46,-4.3,0.74,1.5,1.09,0.08,">1 nonsynonymous","G86L D98L P177C",3
"lib1","SARS-CoV-2","CGAAATCATACCGATC",1,8.54,10.73,-0.04,0.13,2.69,1.09,0.01,">1 nonsynonymous","I2P N30S N151Y",3
"lib1","SARS-CoV-2","CGAAATCCAAGTTGCA",4,25.1,6.05,-4.71,1.04,1.5,1.18,0.02,">1 nonsynonymous","T3K V20S L38R C61S C102Y",5
"lib1","SARS-CoV-2","CGAAATCCATTGCTGA",13,281.48,9.05,-1.71,0.05,2.74,1.09,0,"1 nonsynonymous","G146M",1
"lib1","SARS-CoV-2","CGAAATCCCTTAGCGT",17,115.47,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N92M N157K G174T",3
"lib1","SARS-CoV-2","CGAAATCCTGTAACAA",4,5.12,NA,NA,NA,NA,NA,NA,"stop","V52L Y93* F99* S139V P161I",5
"lib1","SARS-CoV-2","CGAAATCTGACGTTAG",6,103.43,10.69,-0.08,0.04,2.87,1.08,0,"1 nonsynonymous","F160V",1
"lib1","SARS-CoV-2","CGAAATCTTAGTCATG",5,34.63,9.93,-0.83,0.07,2.8,1.02,0,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","CGAAATCTTCACATGT",1,24.47,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G74T N118S G174M",3
"lib1","SARS-CoV-2","CGAAATGACCTACCCG",2,0.29,NA,NA,NA,NA,NA,NA,"stop","Y35* S45H D98G N151T",4
"lib1","SARS-CoV-2","CGAAATGCTTTTATCG",3,77,10.76,0,0.1,2.83,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CGAAATGGGAATTATA",1,14.15,10.33,-0.43,0.08,2.9,1.07,0,">1 nonsynonymous","G116A N171H",2
"lib1","SARS-CoV-2","CGAAATGTTCCCATAA",1,32.01,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","P82N N118M G174R",3
"lib1","SARS-CoV-2","CGAAATTAAAGCAGTA",3,33.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88Y K199I",2
"lib1","SARS-CoV-2","CGAAATTAAGCAATCT",1,21.08,8.22,-2.55,0.36,1.5,1.05,0.05,">1 nonsynonymous","V77E D98H",2
"lib1","SARS-CoV-2","CGAAATTCCTGTAAAT",7,48.82,6,-4.76,1.1,3,1.11,0,">1 nonsynonymous","G86S K132T G146M",3
"lib1","SARS-CoV-2","CGAAATTCGTATACCC",3,34.26,10.78,0.02,0.08,2.68,1.18,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","CGAAATTGACAATCCA",7,47.2,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R25F A33E Q84K W106S Y175T V182K T201Y",7
"lib1","SARS-CoV-2","CGAAATTGACTTACGA",8,154.7,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S69R N92V F167I Y175C K199N",5
"lib1","SARS-CoV-2","CGAAATTGAGCACTAA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","CGAACAAAAAAAGACA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82A I104K Q163R K198S",4
"lib1","SARS-CoV-2","CGAACAAATACCTTCC",1,33.89,10.42,-0.35,0.16,2.7,1.06,0.01,"1 nonsynonymous","Y91M",1
"lib1","SARS-CoV-2","CGAACAACAAAAAGAA",8,151.83,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23C V37H G101V Q168L R179K",5
"lib1","SARS-CoV-2","CGAACAACAAGATTGC",5,81.28,10.58,-0.19,0.05,2.86,1.02,0,">1 nonsynonymous","N120F K128E T140N",3
"lib1","SARS-CoV-2","CGAACAACCTCTAATA",10,100.16,10.81,0.05,0.08,2.94,1.04,0,">1 nonsynonymous","T3G T201R",2
"lib1","SARS-CoV-2","CGAACAACGTTTAAGG",1,18.58,8.46,-2.31,0.17,2.16,1.19,0.02,">1 nonsynonymous","T3W Y35L C102F P169I",4
"lib1","SARS-CoV-2","CGAACAAGTAAAATGA",2,97.84,10.61,-0.16,0.03,2.89,1.07,0,">1 nonsynonymous","G174S K199M",2
"lib1","SARS-CoV-2","CGAACAAGTGAAACGC",2,0.22,NA,NA,NA,NA,NA,NA,"stop","A22N D68* Y165S L187H",4
"lib1","SARS-CoV-2","CGAACAATACACAATA",8,181.19,9.73,-1.04,0.04,2.88,1.07,0,"1 nonsynonymous","N157D",1
"lib1","SARS-CoV-2","CGAACAATATCATTAT",4,103.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V103M L122V K128M V153F Y159S",5
"lib1","SARS-CoV-2","CGAACAATCAGGTTTC",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S S41G",2
"lib1","SARS-CoV-2","CGAACAATTACATTTG",2,55.62,9.14,-1.63,0.1,2.1,1.13,0,">1 nonsynonymous","F17T K87L T201R",3
"lib1","SARS-CoV-2","CGAACAATTCCCAAAG",4,46.8,10.2,-0.57,0.09,2.58,1.01,0,">1 nonsynonymous","L95M T100S",2
"lib1","SARS-CoV-2","CGAACAATTTACTACG",13,58.8,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V71L G86N P149L",3
"lib1","SARS-CoV-2","CGAACAATTTTATGTC",4,20,10.44,-0.33,0.14,2.83,1.14,0.01,">1 nonsynonymous","Y39C K199M",2
"lib1","SARS-CoV-2","CGAACACAGGGAGGCA",4,75.95,10.17,-0.59,0.09,2.5,1.01,0,">1 nonsynonymous","L57R N130Q",2
"lib1","SARS-CoV-2","CGAACACATACCTATA",4,29.6,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T63V E76A L125R I138P",4
"lib1","SARS-CoV-2","CGAACACATTACAACG",1,70.79,10.65,-0.11,0.05,2.9,1.06,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","CGAACACCAGTTTGCG",5,52.8,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","K94T",1
"lib1","SARS-CoV-2","CGAACACCTGCACTCT",16,205.23,9.67,-1.1,0.1,2.45,1.05,0,">1 nonsynonymous","Y35R Y121L",2
"lib1","SARS-CoV-2","CGAACACCTTTGAATT",6,50.94,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","G9L G83C D90P A105N",4
"lib1","SARS-CoV-2","CGAACACGCCAAAGCG",1,1.08,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","CGAACACGTTGATTTG",2,4.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","CGAACAGCAGGGTCAG",1,61.89,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25D Y39L Y178K",3
"lib1","SARS-CoV-2","CGAACAGCATTGCCGG",3,5.72,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I88K V103F T148L G172T L183K",5
"lib1","SARS-CoV-2","CGAACAGCCTTTTTTG",1,0.41,NA,NA,NA,NA,NA,NA,"stop","Y121L G146W V153*",3
"lib1","SARS-CoV-2","CGAACAGCTAACCAAA",14,74.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20L K87V G117M",3
"lib1","SARS-CoV-2","CGAACAGGAGCCATAC",5,3.19,NA,NA,NA,NA,NA,NA,"stop","T3* S41P K87C",3
"lib1","SARS-CoV-2","CGAACAGGCATCGCGT",1,16.52,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F12Y A33G T63E P82Q A89H",5
"lib1","SARS-CoV-2","CGAACAGGGGTTTATT",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T K48W P96S K114W R127A V180G",6
"lib1","SARS-CoV-2","CGAACAGGTACAATAA",2,236.95,9.89,-0.88,0.08,2.09,1.04,0,">1 nonsynonymous","F44L S139L",2
"lib1","SARS-CoV-2","CGAACAGTACCACCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E I104A V173P",3
"lib1","SARS-CoV-2","CGAACAGTATAATACG",5,4.37,NA,NA,NA,NA,NA,NA,"stop","G86* S129M",2
"lib1","SARS-CoV-2","CGAACAGTTACATACG",9,3.65,NA,NA,NA,NA,NA,NA,"stop","C61T G74W F99C A105P Y119* S139E G146L",7
"lib1","SARS-CoV-2","CGAACAGTTGGTATTA",3,8.39,6.38,-4.38,0.87,1.5,1.07,0.06,">1 nonsynonymous","V37W K48S G83Y K87T V103L S129L",6
"lib1","SARS-CoV-2","CGAACATAAAAAAAAT",5,32.79,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","N58F T100S V103D",3
"lib1","SARS-CoV-2","CGAACATATTATAGGC",2,25.42,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35R G101S",2
"lib1","SARS-CoV-2","CGAACATCACTAGTAG",6,26.17,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G51C V71A G86T Y121S K128Q N157A S164C T170F A192T",9
"lib1","SARS-CoV-2","CGAACATCACTTTATA",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W K87Y T100L N120V E141G",5
"lib1","SARS-CoV-2","CGAACATTAAAAACAA",3,37.17,8.97,-1.8,0.23,1.68,1.18,0.02,">1 nonsynonymous","N58L Y123T T140L",3
"lib1","SARS-CoV-2","CGAACATTAATTAAAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","V20E D97* G146R T201W",4
"lib1","SARS-CoV-2","CGAACATTGCACGCCT",2,5.97,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S43L N109S Y143C",3
"lib1","SARS-CoV-2","CGAACCAAATAACGAG",2,9.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F99Y W106I",2
"lib1","SARS-CoV-2","CGAACCACTCTCTCCA",3,21.28,9.72,-1.04,0.18,2.1,1.21,0.01,">1 nonsynonymous","S19R Q168R S200R",3
"lib1","SARS-CoV-2","CGAACCATAGAAAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R D68L D90T N118I G146M",5
"lib1","SARS-CoV-2","CGAACCATTTGCATCA",4,65.15,9.86,-0.9,0.04,2.97,1.02,0,">1 nonsynonymous","I2S T170H",2
"lib1","SARS-CoV-2","CGAACCCAGAGAGGGC",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P A81E N92C D98G A105L G155R",6
"lib1","SARS-CoV-2","CGAACCCCGCTAAAAC",5,130.43,8.33,-2.43,0.14,2.61,1.09,0.01,">1 nonsynonymous","N118C T170Y",2
"lib1","SARS-CoV-2","CGAACCCCGGTCATCA",11,194.61,10.19,-0.57,0.05,2.8,1,0,">1 nonsynonymous","A67V R136H T201N",3
"lib1","SARS-CoV-2","CGAACCCCTACACAGA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","P82M V103* V180H",3
"lib1","SARS-CoV-2","CGAACCCTAAACTCTA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","S41* K87R V173L",3
"lib1","SARS-CoV-2","CGAACCCTTTTGGACT",1,1.87,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CGAACCGAAAACCGAA",5,48.66,10.74,-0.02,0.07,2.8,1.12,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","CGAACCGAATAAGACC",12,13637.69,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6W Y91G Y121N",3
"lib1","SARS-CoV-2","CGAACCGAATAATTAG",1,28.25,10.56,-0.21,0.17,2.73,1.13,0.01,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","CGAACCGACTAGGAGG",15,141.64,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A14W V37R P82W Y119L F134V",5
"lib1","SARS-CoV-2","CGAACCGATTTACGCG",1,25.49,10.6,-0.16,0.1,2.88,1.12,0.01,"1 nonsynonymous","N40A",1
"lib1","SARS-CoV-2","CGAACCGGAGAAGCTA",3,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q K48F T55G P177N",4
"lib1","SARS-CoV-2","CGAACCGGGAATAACT",5,14.78,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","G83I P96W V103S",3
"lib1","SARS-CoV-2","CGAACCGTTTGAAACG",2,42.25,10.62,-0.14,0.05,2.86,1.03,0,">1 nonsynonymous","Q84C T140S",2
"lib1","SARS-CoV-2","CGAACCTATGAGGGCG",6,39.74,10.71,-0.06,0.07,2.92,1.05,0,"1 nonsynonymous","F134W",1
"lib1","SARS-CoV-2","CGAACCTCACACATTA",4,47.49,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C31V K48E G146I Q163Y V181T",5
"lib1","SARS-CoV-2","CGAACGAATTGTAAAC",13,242.78,10.52,-0.24,0.02,2.92,1.04,0,">1 nonsynonymous","N120W K128S",2
"lib1","SARS-CoV-2","CGAACGACACGTCCAT",8,158.64,10.05,-0.72,0.06,2.71,1.03,0,">1 nonsynonymous","N13Y K114Y",2
"lib1","SARS-CoV-2","CGAACGACACTTTACG",15,208.51,8.85,-1.91,0.04,2.83,1.07,0,">1 nonsynonymous","Y121M T170N",2
"lib1","SARS-CoV-2","CGAACGATAGCTTCCA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M P149T",2
"lib1","SARS-CoV-2","CGAACGCCCAACAGGA",3,39.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G51A Y143K T201I",3
"lib1","SARS-CoV-2","CGAACGCCGAACATAG",1,22.95,8.42,-2.34,0.2,1.97,1.11,0.02,">1 nonsynonymous","G83I Y143V",2
"lib1","SARS-CoV-2","CGAACGCGGTTCATCG",4,73.4,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R127E R179Y",2
"lib1","SARS-CoV-2","CGAACGCTCTACTAAA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K P96F T140C",3
"lib1","SARS-CoV-2","CGAACGGAAAGATAGC",7,112.69,10.64,-0.13,0.06,2.89,1.06,0,"1 nonsynonymous","K26A",1
"lib1","SARS-CoV-2","CGAACGGAAGAAGTGT",3,52.32,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","P96R Y175I V181S T201V",4
"lib1","SARS-CoV-2","CGAACGGAGAAGCAAC",2,58.17,10.57,-0.2,0.05,3,1,0,"1 nonsynonymous","L57I",1
"lib1","SARS-CoV-2","CGAACGTAACGAGCAA",1,8.47,6.11,-4.66,2,1.5,1.29,0.04,">1 nonsynonymous","Y91A I104S",2
"lib1","SARS-CoV-2","CGAACGTACAGCACAC",2,56.46,6.32,-4.45,0.82,1.5,1.21,0.04,">1 nonsynonymous","D98E V153I Y178D",3
"lib1","SARS-CoV-2","CGAACGTACTACAAAC",3,16.2,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S45F T63S L95W I104Y Y123H",5
"lib1","SARS-CoV-2","CGAACGTCACAGGCCG",3,81.44,10.71,-0.05,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAACGTGTTCACAAG",3,65.19,6.24,-4.52,0.54,1.5,1.11,0.01,">1 nonsynonymous","S129V F160M Q176Y",3
"lib1","SARS-CoV-2","CGAACGTTTAAAATGA",8,236.95,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12T A33R G101Q Y121V",4
"lib1","SARS-CoV-2","CGAACTAAAGTCGATC",2,73.85,6,-4.76,2,3,1.24,0,">1 nonsynonymous","F44S V115S S129P Q176M",4
"lib1","SARS-CoV-2","CGAACTAAGTCAGAAT",2,398.14,10.79,0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAACTAATAGTGTTT",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51K I80M D90E T100D L162H G174R V181H T201S",8
"lib1","SARS-CoV-2","CGAACTAATGACTTCC",3,27.17,9.65,-1.12,0.17,1.74,1.07,0.01,">1 nonsynonymous","A22T Y35H T100Q T201M",4
"lib1","SARS-CoV-2","CGAACTACAAAAAACG",6,8.77,NA,NA,NA,NA,NA,NA,"stop","A14Q Q84* G174*",3
"lib1","SARS-CoV-2","CGAACTACAATGATTA",6,56.43,9.04,-1.73,0.2,1.57,1.17,0.02,">1 nonsynonymous","L38S T55L G83F",3
"lib1","SARS-CoV-2","CGAACTACATACTGGT",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D V103E W106H D137H F160S G174N",6
"lib1","SARS-CoV-2","CGAACTACCTAGGTCA",7,3.89,NA,NA,NA,NA,NA,NA,"stop","D59R A81* T201W",3
"lib1","SARS-CoV-2","CGAACTAGCTAGACAA",3,50.76,7.74,-3.03,0.12,1.86,1.15,0,">1 nonsynonymous","V71L A105T G152K G166V",4
"lib1","SARS-CoV-2","CGAACTAGTAAGGAGG",6,7.83,6,-4.76,2,1.5,1.1,0.01,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","CGAACTATTTAGGGAC",3,3.09,NA,NA,NA,NA,NA,NA,"stop","K48I Y143*",2
"lib1","SARS-CoV-2","CGAACTCAATTCGTGA",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W L95I S129Y S184V",4
"lib1","SARS-CoV-2","CGAACTCACAAAGCCA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","F8S A14* G83Y S139R F160N",5
"lib1","SARS-CoV-2","CGAACTCAGTTAACGT",6,145.49,9.57,-1.19,0.05,2.82,1.06,0,">1 nonsynonymous","A42F L60V Y119K",3
"lib1","SARS-CoV-2","CGAACTCATGCCCGAG",16,136.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G152I F167D",2
"lib1","SARS-CoV-2","CGAACTCCAGACTTCC",10,166.26,9.99,-0.77,0.05,2.9,1.02,0,">1 nonsynonymous","K87E K128A S164T",3
"lib1","SARS-CoV-2","CGAACTCGAAATGGTT",2,15.04,6,-4.76,2,1.5,1.04,0.02,">1 nonsynonymous","Y21Q T55S Y143L T170V R179V",5
"lib1","SARS-CoV-2","CGAACTGAACAGGATG",10,105.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12E G86V D97A N107V D112E E141R",6
"lib1","SARS-CoV-2","CGAACTGACAAACCCA",4,18.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S164L K199Y",2
"lib1","SARS-CoV-2","CGAACTGTCTCTTCAT",11,84.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10Y D90V D112S Y119V V173A",5
"lib1","SARS-CoV-2","CGAACTGTTAGCAATC",6,72.4,10.74,-0.02,0.04,2.92,1.02,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","CGAACTTAAAATACAA",3,44.52,10.43,-0.33,0.08,2.82,1.03,0,">1 nonsynonymous","G9M G116E G146S",3
"lib1","SARS-CoV-2","CGAACTTAAAGCTAGT",2,65.67,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44L N58R K87R Y143R G174V",5
"lib1","SARS-CoV-2","CGAACTTAATGATAGA",7,71.54,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F8S R16L F99H I104W E141R R179E",6
"lib1","SARS-CoV-2","CGAACTTTAACTCAAA",4,15.11,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","Y21L D90Q W106L P191R K199P",5
"lib1","SARS-CoV-2","CGAAGAAAACCTCTAA",3,13.83,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","G86R I104K K114N",3
"lib1","SARS-CoV-2","CGAAGAAACACTCCGG",3,85.23,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N58Q G155T G172R",3
"lib1","SARS-CoV-2","CGAAGAAACTATCGAA",7,100.87,6,-4.76,1.25,1.5,1.21,0.01,">1 nonsynonymous","N1E E141C N157Y",3
"lib1","SARS-CoV-2","CGAAGAAAGACAGGTT",4,24.33,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L5Q F12E S43H F134H N151P R179S",6
"lib1","SARS-CoV-2","CGAAGAAAGCACTCAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","CGAAGAAAGTACTATA",5,25.4,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I88G L122P T148M Q163S R179K",5
"lib1","SARS-CoV-2","CGAAGAAGGTGAAAAT",6,2.56,NA,NA,NA,NA,NA,NA,"stop","N1L Y121A Y143* Q176V",4
"lib1","SARS-CoV-2","CGAAGAATACAGCTCA",5,43.77,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N4V A33K N58D A81T D90L R127S G152L T201R",8
"lib1","SARS-CoV-2","CGAAGAATACCATTGA",1,21.98,9.25,-1.51,0.35,1.5,1,0.07,">1 nonsynonymous","G86Y V173Q",2
"lib1","SARS-CoV-2","CGAAGACAGATTATAG",3,2.16,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","CGAAGACCACTTGACA",5,15.29,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","I2F T15H L38H Y50I G101D N107G N118S G174K",8
"lib1","SARS-CoV-2","CGAAGACGAAGTACCA",6,53.89,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P54I N157C F167L",3
"lib1","SARS-CoV-2","CGAAGACGATACTTTA",3,23.45,10.86,0.09,0.09,2.93,1.07,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","CGAAGACGATTTACGT",1,40.38,6.76,-4,0.57,1.5,1.23,0.05,">1 nonsynonymous","C61P I88G K199F",3
"lib1","SARS-CoV-2","CGAAGACTAAGAAAGG",4,1.61,NA,NA,NA,NA,NA,NA,"stop","V77L Q84I Y91P D112*",4
"lib1","SARS-CoV-2","CGAAGACTAATTCAGC",1,13.75,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y35D S45F L131S",3
"lib1","SARS-CoV-2","CGAAGAGAAGTTGACG",4,1.24,NA,NA,NA,NA,NA,NA,"stop","I2T S41* L60F Y121W P149A",5
"lib1","SARS-CoV-2","CGAAGAGAATAAGTAT",7,2.68,NA,NA,NA,NA,NA,NA,"stop","A42V C61K N120*",3
"lib1","SARS-CoV-2","CGAAGAGACTACTGTT",2,33.39,8.27,-2.49,0.35,1.5,1,0.06,">1 nonsynonymous","S41N D137F Y165T",3
"lib1","SARS-CoV-2","CGAAGATAAAAAGAAG",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L S41V V52M A81Q Y91R Y121N",6
"lib1","SARS-CoV-2","CGAAGATAATAACCAT",4,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43N C61G",2
"lib1","SARS-CoV-2","CGAAGATAGACAGCAG",10,153.5,10.25,-0.51,0.06,2.84,1.04,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","CGAAGATAGAGATTAT",4,47.77,10.64,-0.12,0.06,2.96,1.04,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","CGAAGATATCTATGGC",2,53.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23M Q168L T201L",3
"lib1","SARS-CoV-2","CGAAGATGAAGTTCTT",3,30.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D97G G116T L131W",3
"lib1","SARS-CoV-2","CGAAGATGTAAGGTAT",1,30.64,10.95,0.18,0.11,2.96,1,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","CGAAGATTAAAGATAG",6,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43W A89L S113R P133N G152T",5
"lib1","SARS-CoV-2","CGAAGATTCCCACGCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N1* K56F",2
"lib1","SARS-CoV-2","CGAAGCAAAATCATGC",2,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A S45L",2
"lib1","SARS-CoV-2","CGAAGCAATCTATCAA",3,51.77,7.22,-3.55,0.31,1.5,1.22,0.02,">1 nonsynonymous","G51I D90Y",2
"lib1","SARS-CoV-2","CGAAGCACATCTATCT",1,0.46,NA,NA,NA,NA,NA,NA,"stop","G9* F47* I88T G174Q",4
"lib1","SARS-CoV-2","CGAAGCAGCTGTGCCT",2,12.58,8.37,-2.39,0.23,1.69,1.2,0.03,">1 nonsynonymous","T3P R16H R127L",3
"lib1","SARS-CoV-2","CGAAGCAGTAGCCAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F44R K56T Y93* F99N V103D D112K",6
"lib1","SARS-CoV-2","CGAAGCATAACCGCAG",4,54.56,6,-4.76,1.24,1.5,1.14,0.01,">1 nonsynonymous","F17D G152V",2
"lib1","SARS-CoV-2","CGAAGCATCACCCATG",9,78.64,8.07,-2.7,0.25,1.5,1.06,0.02,">1 nonsynonymous","Y91A F126L G174W",3
"lib1","SARS-CoV-2","CGAAGCATTAAGAGTA",4,34.47,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","F44M V65K V71S R136D P149T",5
"lib1","SARS-CoV-2","CGAAGCCACAGGGAAT",3,108.1,9.54,-1.22,0.13,2.32,1.12,0.01,">1 nonsynonymous","F62D R73M S200K",3
"lib1","SARS-CoV-2","CGAAGCCACATTCCCA",12,449.31,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","R16H L95T V115N C158S",4
"lib1","SARS-CoV-2","CGAAGCCCACTACGAT",5,60.23,10.52,-0.24,0.04,2.91,1.02,0,">1 nonsynonymous","S41T D90L",2
"lib1","SARS-CoV-2","CGAAGCCCCAACGCTG",1,10.78,10.46,-0.3,0.15,2.72,1.16,0.01,">1 nonsynonymous","N40Y C61T A190Y",3
"lib1","SARS-CoV-2","CGAAGCCGCCTGTGCC",6,73.49,9.56,-1.2,0.1,2.51,1.12,0,">1 nonsynonymous","R25K K87L P197R",3
"lib1","SARS-CoV-2","CGAAGCGACTGAACGG",1,9.64,10.46,-0.3,0.48,1.64,1.02,0.06,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","CGAAGCGAGCCCCAAC",7,60.9,6.15,-4.62,0.9,1.5,1.18,0.03,">1 nonsynonymous","N92S G146F",2
"lib1","SARS-CoV-2","CGAAGCGTCAGAAAAG",2,4.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49Y",1
"lib1","SARS-CoV-2","CGAAGCTGAAAAGCAT",2,10.66,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L5I S41P N107Q Y119T V182W",5
"lib1","SARS-CoV-2","CGAAGCTTAATAACAA",8,174.82,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R124I I138C Q144M",3
"lib1","SARS-CoV-2","CGAAGCTTGAGACGAC",4,41.83,10.72,-0.05,0.05,2.95,1.04,0,"1 nonsynonymous","I104M",1
"lib1","SARS-CoV-2","CGAAGGAAGTTGTAGA",4,2.7,NA,NA,NA,NA,NA,NA,"stop","T15E F167*",2
"lib1","SARS-CoV-2","CGAAGGAATTCAGTCG",5,175.8,8.46,-2.3,0.13,2.65,1.09,0.01,">1 nonsynonymous","T63E Y175S",2
"lib1","SARS-CoV-2","CGAAGGACATACAATA",2,71.92,10.1,-0.66,0.12,2.14,1.02,0.01,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","CGAAGGAGTTAAAAAA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","L5* P191T",2
"lib1","SARS-CoV-2","CGAAGGATAAGTATAA",6,39.38,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9S F70D D98G I104Y Q144T S184N",6
"lib1","SARS-CoV-2","CGAAGGATTAACCAAC",3,14.65,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","I2D R27H P96Y S129R N171I",5
"lib1","SARS-CoV-2","CGAAGGCATTATCACT",9,82.15,10.62,-0.15,0.06,2.91,1.02,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","CGAAGGCCATTGATCA",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C C49Y G86E",3
"lib1","SARS-CoV-2","CGAAGGCCGATAACCT",5,161.76,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","K94Y N107F N130Y P149S F160S",5
"lib1","SARS-CoV-2","CGAAGGCCTTGTGCCA",1,14.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G116F S147F T201M",3
"lib1","SARS-CoV-2","CGAAGGCGAAATTAAA",4,31.41,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D34R G86L N110Q",3
"lib1","SARS-CoV-2","CGAAGGCGATAATCCA",1,8.47,9.7,-1.07,0.32,1.73,1.02,0.05,">1 nonsynonymous","N4Y L38K",2
"lib1","SARS-CoV-2","CGAAGGCGTTAAGACC",2,15.76,8.37,-2.4,0.3,1.5,1.2,0.05,">1 nonsynonymous","N107K R136V T201A",3
"lib1","SARS-CoV-2","CGAAGGGCAGGTGCCG",4,17.51,6.93,-3.84,0.32,1.53,1.1,0.02,">1 nonsynonymous","C102I E141M G174V",3
"lib1","SARS-CoV-2","CGAAGGGGATATTACT",1,44.25,6,-4.76,1.75,1.5,1.24,0.04,">1 nonsynonymous","P7E D137G Y165L",3
"lib1","SARS-CoV-2","CGAAGGTTATTACAAA",12,129.6,10.78,0.02,0.05,2.89,1.06,0,"1 nonsynonymous","P191R",1
"lib1","SARS-CoV-2","CGAAGTAAAGTACAAT",1,13.48,6.33,-4.43,0.75,1.5,1.1,0.03,">1 nonsynonymous","T3F D34R F99D",3
"lib1","SARS-CoV-2","CGAAGTAAATTATTGG",12,36.42,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P54N F62N P96M V103S S129N",5
"lib1","SARS-CoV-2","CGAAGTAACAAAGGTA",1,52.69,10.55,-0.21,0.08,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAAGTAACCCAACGC",1,5.13,6,-4.76,2,1.5,1.05,0.03,">1 nonsynonymous","Y50L V77L Y119L",3
"lib1","SARS-CoV-2","CGAAGTAATACATTTT",6,58.66,8.96,-1.8,0.29,1.5,1,0.06,">1 nonsynonymous","P82R A89E K128T",3
"lib1","SARS-CoV-2","CGAAGTAATACTGAGA",4,38.91,6.85,-3.91,0.35,1.5,1.08,0.02,">1 nonsynonymous","I104T Y175L",2
"lib1","SARS-CoV-2","CGAAGTAATAGGCACT",7,343.47,9.04,-1.73,0.08,2.1,1.13,0,">1 nonsynonymous","G9I A105S P177A",3
"lib1","SARS-CoV-2","CGAAGTAATCCTTGAT",8,82,10.39,-0.37,0.04,2.88,1.02,0,">1 nonsynonymous","V37K F44S",2
"lib1","SARS-CoV-2","CGAAGTACATCTCCCA",2,26.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19N L57D K87F D98G T201S",5
"lib1","SARS-CoV-2","CGAAGTACTAGCACAT",1,14.36,6.09,-4.68,0.77,3,1.13,0.02,">1 nonsynonymous","L5R F70S",2
"lib1","SARS-CoV-2","CGAAGTAGAGATAAGA",11,96.48,6,-4.76,2,3,1.18,0,">1 nonsynonymous","F62S L162P",2
"lib1","SARS-CoV-2","CGAAGTATAAAAAGAC",3,30.41,6.77,-3.99,0.6,1.5,1.09,0.05,">1 nonsynonymous","F99G P133L G146C",3
"lib1","SARS-CoV-2","CGAAGTATATGATGAT",4,15.82,10.18,-0.58,0.13,2.94,1.03,0.01,">1 nonsynonymous","L38Y Q144S",2
"lib1","SARS-CoV-2","CGAAGTCAGAGATTTT",9,165.19,6.4,-4.36,0.49,1.5,1.17,0.02,">1 nonsynonymous","D90I Y175M",2
"lib1","SARS-CoV-2","CGAAGTCAGTAATGAT",4,15.36,6,-4.76,2,3,1.22,0.01,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","CGAAGTCCTTGCGGTA",1,15.79,9.96,-0.8,0.06,2.93,1.03,0,"1 nonsynonymous","L125Q",1
"lib1","SARS-CoV-2","CGAAGTGATCTACCAA",5,115.04,6,-4.76,1.43,1.5,1.15,0.02,">1 nonsynonymous","F44N L162S",2
"lib1","SARS-CoV-2","CGAAGTGTAAACTAGT",1,22.44,9.79,-0.97,0.17,1.98,1.07,0.02,">1 nonsynonymous","Y91L V180T K198I",3
"lib1","SARS-CoV-2","CGAAGTGTGATATTGA",1,29.02,10.71,-0.05,0.07,2.95,1,0,">1 nonsynonymous","T140I I142L",2
"lib1","SARS-CoV-2","CGAAGTTAAAACAGGC",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N I80W Y119M R136M V173K",5
"lib1","SARS-CoV-2","CGAAGTTAAATTCACA",1,37.26,9.78,-0.98,0.1,2.47,1.05,0,">1 nonsynonymous","C31R K128V",2
"lib1","SARS-CoV-2","CGAAGTTGATAGAACA",5,15.47,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C61L L95P D112I P149K",4
"lib1","SARS-CoV-2","CGAAGTTTCTTAATTT",9,177.05,10.16,-0.61,0.05,2.57,1.03,0,">1 nonsynonymous","R25S T201L",2
"lib1","SARS-CoV-2","CGAAGTTTTATATCTT",10,161.11,10.49,-0.27,0.05,2.94,1.01,0,">1 nonsynonymous","P54F K87L",2
"lib1","SARS-CoV-2","CGAATAAAAAAATGAA",13,74.98,10.68,-0.08,0.05,2.91,1.03,0,"1 nonsynonymous","T140I",1
"lib1","SARS-CoV-2","CGAATAAAAAACCAAA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","P7A S41R K87* W106* R127F F160V",6
"lib1","SARS-CoV-2","CGAATAAAAGGTACGT",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E A42L W106G",3
"lib1","SARS-CoV-2","CGAATAAACTCTGAGG",1,42.14,7.04,-3.73,0.45,1.5,1.17,0.06,">1 nonsynonymous","T15L Y175K",2
"lib1","SARS-CoV-2","CGAATAAACTTTACAT",12,1.19,NA,NA,NA,NA,NA,NA,"stop","N1G N13* K87Y G155L K199E",5
"lib1","SARS-CoV-2","CGAATAAATGCGCTTA",3,24.56,10.87,0.11,0.06,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CGAATAAATTGACTGG",4,54.14,8.78,-1.99,0.18,1.7,1.23,0.01,">1 nonsynonymous","T55L D137I",2
"lib1","SARS-CoV-2","CGAATAACAGATAATT",3,38.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q S45W Y91L C102P",4
"lib1","SARS-CoV-2","CGAATAACATACCAGT",3,88.61,10.81,0.05,0.08,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATAACCGACAAAA",2,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C A81H L122S",3
"lib1","SARS-CoV-2","CGAATAACCTAGCCTG",1,1.52,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","CGAATAAGACATAACA",3,11.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3Y D90A T100I E135P P149T",5
"lib1","SARS-CoV-2","CGAATAAGGCTACAAG",4,78.59,10.75,-0.01,0.04,2.94,1.01,0,">1 nonsynonymous","I2F I28M C61D",3
"lib1","SARS-CoV-2","CGAATAAGTCATTGCA",3,43.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4W V77K P133W T140I G146Q",5
"lib1","SARS-CoV-2","CGAATAATAAATTACT",1,5.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L L131A S139D F156L",4
"lib1","SARS-CoV-2","CGAATAATATAATAAA",10,69.1,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G86V N92M",2
"lib1","SARS-CoV-2","CGAATACAATCTATAT",1,37.07,10.85,0.08,0.07,2.93,1,0,">1 nonsynonymous","P7N S36K",2
"lib1","SARS-CoV-2","CGAATACATAAGTAGA",5,24.76,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L125S V180E",2
"lib1","SARS-CoV-2","CGAATACATACACGTC",18,10.83,NA,NA,NA,NA,NA,NA,"stop","Y35S V103*",2
"lib1","SARS-CoV-2","CGAATACATTGGTACT",3,4.57,NA,NA,NA,NA,NA,NA,"stop","E10L N40P K56Q Y123L K198*",5
"lib1","SARS-CoV-2","CGAATACCACATAAAA",1,5.96,7.79,-2.98,0.4,1.5,1.39,0.05,">1 nonsynonymous","K26A C61W R127S",3
"lib1","SARS-CoV-2","CGAATACCCATCAGTG",1,21.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63L K132M L162K V180M",4
"lib1","SARS-CoV-2","CGAATACCGATAGCCT",6,30.9,10.57,-0.19,0.11,2.84,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATACGCGCCACAC",5,37.8,6.07,-4.69,0.52,1.5,1.15,0.01,">1 nonsynonymous","A14L T63P N107M",3
"lib1","SARS-CoV-2","CGAATACGGTATAACA",5,38.4,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W23Q K87N L122P",3
"lib1","SARS-CoV-2","CGAATACTGCGCTATA",4,65.13,10.78,0.01,0.09,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATAGAAACAAACC",2,27.1,10.59,-0.18,0.09,2.87,1.08,0,">1 nonsynonymous","D59V T201S",2
"lib1","SARS-CoV-2","CGAATAGAACAGCCGA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","K26F R73* T100Q E135S Y165S",5
"lib1","SARS-CoV-2","CGAATAGATTAACCAT",2,136.49,9.21,-1.55,0.06,2.83,1.1,0,">1 nonsynonymous","R27S N157S",2
"lib1","SARS-CoV-2","CGAATAGCGTTCCGAC",3,19.33,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N4I Y21L R25L A42R K198M T201N",6
"lib1","SARS-CoV-2","CGAATAGTAAAATGTA",8,1.39,NA,NA,NA,NA,NA,NA,"stop","F17Q N120* N151T G174V",4
"lib1","SARS-CoV-2","CGAATATACAATTGGG",12,87.8,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16E F44D K87L V103H C158W",5
"lib1","SARS-CoV-2","CGAATATACCCATGAA",7,51.24,9.41,-1.35,0.18,1.68,1.16,0.01,">1 nonsynonymous","V52M Y91C D97G",3
"lib1","SARS-CoV-2","CGAATATATACGTGAT",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26F G83K G155R",3
"lib1","SARS-CoV-2","CGAATATATCTGGGCT",1,17.99,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","A33K A89F Y119G F160W",4
"lib1","SARS-CoV-2","CGAATATTAGAAGGAA",5,83.65,10.23,-0.53,0.06,2.79,1.03,0,">1 nonsynonymous","T55N G83V",2
"lib1","SARS-CoV-2","CGAATATTATATTAAA",3,16.51,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","G101W",1
"lib1","SARS-CoV-2","CGAATATTCCACTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23R F62C S69* D97V Y119L E135R",6
"lib1","SARS-CoV-2","CGAATATTCCTAATGG",4,56,8.88,-1.89,0.25,1.53,1.19,0.02,">1 nonsynonymous","A33R L60V D90G E141D",4
"lib1","SARS-CoV-2","CGAATATTGAAAATAT",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E N58Y G101R I142Y C158D",5
"lib1","SARS-CoV-2","CGAATATTTGTCTCCG",1,10.39,9.32,-1.44,0.25,1.91,1.15,0.04,">1 nonsynonymous","D112V E154S",2
"lib1","SARS-CoV-2","CGAATCAAAACACAAT",5,93.95,10.8,0.04,0.1,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATCAAATTAACTT",2,0.66,NA,NA,NA,NA,NA,NA,"stop","N58G Q84L F99* N130V",4
"lib1","SARS-CoV-2","CGAATCAAGTAATCGA",1,42.63,9.04,-1.73,0.13,2.53,1.13,0.01,">1 nonsynonymous","P161T A192K",2
"lib1","SARS-CoV-2","CGAATCAATCGACACT",2,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F S53R R124L C158M K198Y",5
"lib1","SARS-CoV-2","CGAATCAATCTTAAAA",4,100.16,10.55,-0.22,0.07,2.89,1.06,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","CGAATCAATGTTTACA",3,59.47,8.11,-2.66,0.22,1.5,1.13,0.02,">1 nonsynonymous","Y35R S113G T140F",3
"lib1","SARS-CoV-2","CGAATCAATTCAGCAA",1,24.55,9.96,-0.81,0.06,2.87,1,0,">1 nonsynonymous","C6T L187Q T201R",3
"lib1","SARS-CoV-2","CGAATCAATTGTAAAG",6,30.06,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","T15N N92L",2
"lib1","SARS-CoV-2","CGAATCAGAAACGTAC",2,53.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T55G N107Y Y119H",3
"lib1","SARS-CoV-2","CGAATCAGTTTAGATT",1,15.02,10.05,-0.72,0.32,2.08,1.39,0.04,">1 nonsynonymous","G9E D98G Y123S K128Y",4
"lib1","SARS-CoV-2","CGAATCCAATATCAGA",7,138.05,8.72,-2.04,0.11,2.51,1.11,0.01,">1 nonsynonymous","N1C L60C Y119L",3
"lib1","SARS-CoV-2","CGAATCCAGACACGTA",1,7.16,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","L5V W23E L60M F99K A105M K198S",6
"lib1","SARS-CoV-2","CGAATCCAGGTAGTAC",4,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V G83W Y91L T100W N107R",5
"lib1","SARS-CoV-2","CGAATCCCAGCAGCCA",4,30.9,10.31,-0.45,0.1,2.47,1.1,0.01,">1 nonsynonymous","T100S I138F",2
"lib1","SARS-CoV-2","CGAATCCGTTGTACGC",4,51.11,10.73,-0.04,0.04,2.97,1.02,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","CGAATCCTGAATCTTA",6,0.75,NA,NA,NA,NA,NA,NA,"stop","N30* G117K",2
"lib1","SARS-CoV-2","CGAATCGCATAAATCA",1,28.92,7.29,-3.47,0.36,1.5,1.11,0.03,">1 nonsynonymous","G9S F99I G152F",3
"lib1","SARS-CoV-2","CGAATCGCCCCCAGAC",1,36.92,10.17,-0.59,0.08,2.83,1,0,">1 nonsynonymous","S139V Y178F",2
"lib1","SARS-CoV-2","CGAATCGCTGTTATTT",3,102.89,10.52,-0.25,0.04,2.93,1.03,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","CGAATCGGTTATTGTT",3,85.83,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L38N G86T P149L",3
"lib1","SARS-CoV-2","CGAATCTACAGCAAAA",8,27.97,6.52,-4.24,0.3,1.5,1.13,0.01,">1 nonsynonymous","N171F Q176V V180L",3
"lib1","SARS-CoV-2","CGAATCTACTTTTAAG",1,50.51,10.62,-0.15,0.03,2.95,1.04,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","CGAATCTTCTACAACA",4,42.7,7.23,-3.53,0.29,1.5,1.04,0.03,">1 nonsynonymous","A81P W106V S129I S164H",4
"lib1","SARS-CoV-2","CGAATGAAAAATGCTG",10,40.6,6,-4.76,2,3,1.2,0,">1 nonsynonymous","C6H Y93R",2
"lib1","SARS-CoV-2","CGAATGAAACTAAGCC",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I S53L T170M",3
"lib1","SARS-CoV-2","CGAATGAACGATGCGC",4,32.4,9.4,-1.36,0.15,1.93,1.18,0.01,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","CGAATGACCAACCTCA",2,29.33,10.75,-0.02,0.07,2.92,1.06,0,"1 nonsynonymous","K128H",1
"lib1","SARS-CoV-2","CGAATGACTAAAGACT",2,28.19,10.65,-0.11,0.08,2.89,1.11,0,">1 nonsynonymous","Q144K T201N",2
"lib1","SARS-CoV-2","CGAATGAGTGATTCTT",1,15.25,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S108K L131R N157F G174W",4
"lib1","SARS-CoV-2","CGAATGATATGAACCG",5,25.66,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","A33L F70S P96V G116Y Y121T",5
"lib1","SARS-CoV-2","CGAATGATTTTTAATC",3,37.74,10.57,-0.2,0.06,2.91,1.03,0,">1 nonsynonymous","I104C L122V",2
"lib1","SARS-CoV-2","CGAATGCCGTCCCGCA",1,30.03,10.47,-0.29,0.06,2.78,1.11,0,">1 nonsynonymous","A42T L162V",2
"lib1","SARS-CoV-2","CGAATGCGTGGCTATG",7,17.22,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1Y D68Q N130A T201L",4
"lib1","SARS-CoV-2","CGAATGGCCTCAAGAC",1,0.19,NA,NA,NA,NA,NA,NA,"stop","T15S S45D Y121*",3
"lib1","SARS-CoV-2","CGAATGGTAACAACGA",9,73.23,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F44P Y50L L60C N107Q L122S",5
"lib1","SARS-CoV-2","CGAATGGTCAAAACCT",4,64.84,9.78,-0.98,0.06,2.8,1.06,0,">1 nonsynonymous","S36Q N118C",2
"lib1","SARS-CoV-2","CGAATGGTGAAATACT",2,52.28,9.98,-0.79,0.07,2.14,1.02,0,">1 nonsynonymous","F99H T201D",2
"lib1","SARS-CoV-2","CGAATGTATAAAGCTA",6,20.5,10.29,-0.48,0.06,2.8,1.07,0,">1 nonsynonymous","N171F C195K K199L",3
"lib1","SARS-CoV-2","CGAATGTCCCCGTCAA",5,129.73,8.67,-2.09,0.05,2.58,1.1,0,">1 nonsynonymous","D98L Y119V F134W",3
"lib1","SARS-CoV-2","CGAATGTCGTTAAAAT",7,118.78,10.21,-0.56,0.09,2.57,1.01,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","CGAATGTCTATCACAA",2,1.31,NA,NA,NA,NA,NA,NA,"stop","R124K T201*",2
"lib1","SARS-CoV-2","CGAATGTGGTTATAAC",10,149.66,10.51,-0.25,0.04,2.96,1,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","CGAATGTTAATAGGTT",8,89.62,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34N Y66P T85I Y91I T100R",5
"lib1","SARS-CoV-2","CGAATTAAAACATCTG",5,11.29,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","N1L A22L G86Y V103N L122A Q176M",6
"lib1","SARS-CoV-2","CGAATTAAAGTTCTCT",6,0.16,NA,NA,NA,NA,NA,NA,"stop","P54C G74V N92* F160T",4
"lib1","SARS-CoV-2","CGAATTAATATTAACG",5,26.99,6.09,-4.67,0.84,1.92,1.25,0.02,">1 nonsynonymous","L60D I104R P133E S139A N151G",5
"lib1","SARS-CoV-2","CGAATTACACTTACTG",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y N92C T148S P161S",4
"lib1","SARS-CoV-2","CGAATTACCTTGGTCG",3,100.21,10.67,-0.09,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATTACGAATGTCA",5,136.03,9.38,-1.39,0.15,1.57,1.14,0.01,">1 nonsynonymous","S36G C49L",2
"lib1","SARS-CoV-2","CGAATTACTACGCGTT",8,47.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C61D G152S Y165S",3
"lib1","SARS-CoV-2","CGAATTAGAGTCAACT",2,17.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81G G83R D112A E154G",4
"lib1","SARS-CoV-2","CGAATTATAACCTAAC",1,14.6,8.99,-1.78,0.28,1.87,1.18,0.04,">1 nonsynonymous","G116I P161S",2
"lib1","SARS-CoV-2","CGAATTATGCCAGACT",4,0,NA,NA,NA,NA,NA,NA,"stop","G83C Q168*",2
"lib1","SARS-CoV-2","CGAATTCCAGACGTAA",1,59.15,10.71,-0.05,0.06,2.91,1.07,0,"1 nonsynonymous","S164P",1
"lib1","SARS-CoV-2","CGAATTCCTTCACAAC",2,27.18,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C6N K48T A89C S139A",4
"lib1","SARS-CoV-2","CGAATTGAGCACCAAG",7,101.51,10.74,-0.03,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAATTGAGGTACTCA",6,46.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A18L V37R C61H I88H V103K",5
"lib1","SARS-CoV-2","CGAATTGCATTAAGTT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119R K128Y D137R",3
"lib1","SARS-CoV-2","CGAATTGCGACTGTGA",5,50.49,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F70V E135P P161V Q168A",4
"lib1","SARS-CoV-2","CGAATTTAATAACACA",4,36.77,6.63,-4.13,0.62,1.5,1.16,0.05,">1 nonsynonymous","F8V G86S Q176P",3
"lib1","SARS-CoV-2","CGAATTTACACAACTT",4,7.26,NA,NA,NA,NA,NA,NA,"stop","T85P Y175* S200I",3
"lib1","SARS-CoV-2","CGAATTTATAGGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T46H Y91F I104* I138S T148F",5
"lib1","SARS-CoV-2","CGAATTTCAACGAATT",3,20.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44R F99A S139D K198T",4
"lib1","SARS-CoV-2","CGAATTTCACACAAAT",1,16.96,10.13,-0.63,0.38,1.57,1,0.05,">1 nonsynonymous","W106T S129F E141T",3
"lib1","SARS-CoV-2","CGAATTTCACCATTAC",3,29.97,6,-4.76,2,3,1.12,0,">1 nonsynonymous","P7L L38G Y66A G86W",4
"lib1","SARS-CoV-2","CGAATTTCGTGTATGA",3,29.05,10.1,-0.66,0.08,2.8,1,0,">1 nonsynonymous","K56M R78L E141M N151H",4
"lib1","SARS-CoV-2","CGAATTTGGGTTAATC",1,10.53,8.37,-2.39,0.34,1.5,1,0.04,">1 nonsynonymous","C49I K132W",2
"lib1","SARS-CoV-2","CGAATTTTAAAATGGC",5,30.52,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","N1H I88K",2
"lib1","SARS-CoV-2","CGAATTTTTGGAATTA",5,82.35,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S29L Y35T I88M S108I N120S",5
"lib1","SARS-CoV-2","CGACAAAAGATCTCGT",2,16.59,10.39,-0.38,0.16,2.54,1,0.01,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","CGACAAAATAAAATTA",3,68.32,10.76,0,0.07,2.89,1.05,0,">1 nonsynonymous","T55M T201V",2
"lib1","SARS-CoV-2","CGACAAAATTACAGAA",3,186.74,10.77,0,0.04,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACAAAATTTACGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","V20R C31R S41* Y175R",4
"lib1","SARS-CoV-2","CGACAAACGGCAAGCC",4,48.39,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A33R N40A E76K V153L",4
"lib1","SARS-CoV-2","CGACAAAGACTTGATC",6,15.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D112Y G117F S139I",3
"lib1","SARS-CoV-2","CGACAAAGCATGACAG",11,78.15,8.24,-2.52,0.37,1.5,1,0.05,">1 nonsynonymous","S19W Y50H T100Y",3
"lib1","SARS-CoV-2","CGACAAAGCGCATTGA",3,40.19,6.39,-4.38,0.62,1.5,1.14,0.03,">1 nonsynonymous","G74I T140S F167T",3
"lib1","SARS-CoV-2","CGACAAAGTGACGAAA",1,3.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","CGACAAATACAAATAG",3,48.49,10.68,-0.09,0.14,2.77,1.12,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CGACAAATGGATTCAA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","T3* C6W F62M",3
"lib1","SARS-CoV-2","CGACAACCGCAAGCGC",4,22.1,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","F17K F62V G83F Y91G N107E",5
"lib1","SARS-CoV-2","CGACAACGCCAGATCT",6,43.2,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","D98V F99L L125T F156T",4
"lib1","SARS-CoV-2","CGACAAGAAGTTAAAT",5,98.57,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L5T F12L A67S I142E Y159V",5
"lib1","SARS-CoV-2","CGACAAGACAATAAGT",1,27.51,9.68,-1.09,0.1,2.78,1.09,0,">1 nonsynonymous","I138W F156S",2
"lib1","SARS-CoV-2","CGACAAGATAAATGGA",1,14.8,10.65,-0.12,0.15,2.86,1.12,0.01,">1 nonsynonymous","L5S V77L",2
"lib1","SARS-CoV-2","CGACAAGCAACCTTCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","CGACAAGCACGAGACA",8,126.22,6.1,-4.67,0.61,1.5,1.17,0.01,">1 nonsynonymous","L57S F70N Y91L G117C T140R P161L",6
"lib1","SARS-CoV-2","CGACAAGCATAATTCC",2,50.23,7.47,-3.29,0.2,2.14,1.18,0.01,"1 nonsynonymous","Y175E",1
"lib1","SARS-CoV-2","CGACAAGCTTAAGATA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","CGACAAGTGTAGCTTT",3,16.73,8.58,-2.18,0.18,2.16,1.15,0.01,">1 nonsynonymous","I2K T140N Y165V T201F",4
"lib1","SARS-CoV-2","CGACAATACTCAACAT",5,38.77,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R27S C49S N107G",3
"lib1","SARS-CoV-2","CGACAATCTAGTTCCA",3,35.13,10.74,-0.02,0.05,2.94,1,0,">1 nonsynonymous","Q84S I138L P149T E154R",4
"lib1","SARS-CoV-2","CGACAATGTCGAATAG",3,5.83,6.28,-4.48,2,3,1.27,0.01,">1 nonsynonymous","A22T S53V G101S",3
"lib1","SARS-CoV-2","CGACAATGTCTAACGA",4,56.49,10.88,0.12,0.1,2.82,1.09,0,">1 nonsynonymous","T3L Y39F",2
"lib1","SARS-CoV-2","CGACAATTAATACACG",1,11.99,8.46,-2.3,0.41,1.5,1.33,0.06,">1 nonsynonymous","V77L K94A E141L G196D",4
"lib1","SARS-CoV-2","CGACAATTCTTCAACT",2,23.71,7.04,-3.72,0.39,1.5,1.1,0.02,">1 nonsynonymous","A89H P96Y G146A",3
"lib1","SARS-CoV-2","CGACACAAATCGCCCG",3,47.37,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V20E T100Y P149Q",3
"lib1","SARS-CoV-2","CGACACAATCATTCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D I80E D90H S113N P161L",5
"lib1","SARS-CoV-2","CGACACACAGCTGCAG",1,17.35,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6I R27T P82T T201M",4
"lib1","SARS-CoV-2","CGACACAGCTCAAGGC",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E K114H K198L",3
"lib1","SARS-CoV-2","CGACACATCCTGAAAC",3,31.86,6,-4.76,2,3,1.2,0,">1 nonsynonymous","I88N S113V Y175T A190S",4
"lib1","SARS-CoV-2","CGACACATTGCAAGAT",1,2.35,NA,NA,NA,NA,NA,NA,"stop","V37G E141*",2
"lib1","SARS-CoV-2","CGACACCAACTGAGTC",4,42,10.71,-0.06,0.04,2.92,1.05,0,"1 nonsynonymous","Q163G",1
"lib1","SARS-CoV-2","CGACACCACGTTTAAA",4,17.9,6.29,-4.48,1.09,1.5,1.22,0.05,">1 nonsynonymous","V103T C158R",2
"lib1","SARS-CoV-2","CGACACCACTAAACCA",5,118.52,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F8D R127G C150V R179Y",4
"lib1","SARS-CoV-2","CGACACCATCAATGCT",1,45.21,10.6,-0.17,0.07,2.93,1.05,0,">1 nonsynonymous","G83N K128R",2
"lib1","SARS-CoV-2","CGACACCATCTTTCAA",4,60.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22G S45E Y143K",3
"lib1","SARS-CoV-2","CGACACCCAGTCCAAA",1,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E S43L T55Q P82T D90R",5
"lib1","SARS-CoV-2","CGACACCCCATACACT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","Y35* T85Q P96T A105*",4
"lib1","SARS-CoV-2","CGACACCCGGTACTCA",3,8.72,9.43,-1.34,0.21,1.62,1.2,0.02,">1 nonsynonymous","T100G I138P",2
"lib1","SARS-CoV-2","CGACACCGCAAGCATT",11,72.41,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A18R F99L T170P",3
"lib1","SARS-CoV-2","CGACACCTAAACTAGA",5,115.03,10.72,-0.04,0.07,2.86,1.09,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","CGACACCTCGAATCGA",9,106.41,10.76,-0.01,0.04,2.92,1.04,0,"1 nonsynonymous","N1L",1
"lib1","SARS-CoV-2","CGACACCTTTCGACCA",2,16.9,10.95,0.18,0.08,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACACGACGACCTGA",2,10.97,10.09,-0.67,0.11,1.95,1,0.01,">1 nonsynonymous","D34I K128L",2
"lib1","SARS-CoV-2","CGACACGAGACCTAAC",9,149.64,8.53,-2.23,0.14,1.64,1.14,0.01,">1 nonsynonymous","D112L N120L",2
"lib1","SARS-CoV-2","CGACACGATTTAAATT",12,88.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35M A67N D97P",3
"lib1","SARS-CoV-2","CGACACGTCAAACCTG",5,43.71,8.11,-2.65,0.15,1.86,1.18,0.01,">1 nonsynonymous","N107S Y143M",2
"lib1","SARS-CoV-2","CGACACGTCAGATCAC",1,48.26,10.11,-0.66,0.09,2.21,1.02,0,">1 nonsynonymous","W106A T201K",2
"lib1","SARS-CoV-2","CGACACGTCCAGTCAA",4,122.19,10.69,-0.07,0.05,2.9,1.06,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","CGACACGTTGGAGGGA",7,96.92,6.19,-4.57,0.71,1.5,1.17,0.02,">1 nonsynonymous","R27F C158E",2
"lib1","SARS-CoV-2","CGACACTAGACTGCGC",2,68.18,6,-4.76,1,1.5,1.15,0.02,">1 nonsynonymous","N30M E141T G172K",3
"lib1","SARS-CoV-2","CGACACTGAACCACAG",4,76.78,10.76,-0.01,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACACTGGCCACGCA",1,29.58,9.72,-1.05,0.1,2.76,1.08,0.01,">1 nonsynonymous","D112E T201R",2
"lib1","SARS-CoV-2","CGACAGAAACCAGTGT",5,42.57,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F44K N58H L95A",3
"lib1","SARS-CoV-2","CGACAGAAATTAGAAG",5,130.34,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92A G117D",2
"lib1","SARS-CoV-2","CGACAGAACATATCTA",6,7.41,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22W F44S T85K Y119S R127Q S164G",6
"lib1","SARS-CoV-2","CGACAGAACCATAGAA",2,13.33,10.07,-0.69,0.11,2.71,1,0.01,">1 nonsynonymous","L5R R16V N40A G116D G146A",5
"lib1","SARS-CoV-2","CGACAGAACGAACCAG",2,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Q P96V Y123K G172A V180D",5
"lib1","SARS-CoV-2","CGACAGAAGTGTCCAA",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R F99I L122P",3
"lib1","SARS-CoV-2","CGACAGACAAAACCGT",19,79.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90I T100S W106R Q163N",4
"lib1","SARS-CoV-2","CGACAGACAAAATAAC",1,7.18,6.75,-4.02,0.5,1.5,1.06,0.02,">1 nonsynonymous","G9N F167P",2
"lib1","SARS-CoV-2","CGACAGACTTACGGAG",8,0.36,NA,NA,NA,NA,NA,NA,"stop","Y50L S113V K128N T140* Q168E L187C",6
"lib1","SARS-CoV-2","CGACAGCCACCGTCAA",3,89.83,10.8,0.04,0.07,2.9,1.06,0,">1 nonsynonymous","T3I S43D T55A S147P",4
"lib1","SARS-CoV-2","CGACAGCGCCAACTTA",5,49.44,10.84,0.08,0.09,2.84,1.12,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","CGACAGCTAATTGCTG",6,25.94,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","C6Y P54L G83T G117V Y119L",5
"lib1","SARS-CoV-2","CGACAGCTCTAAATCA",4,23.32,9.3,-1.47,0.32,1.61,1.15,0.03,"1 nonsynonymous","P96F",1
"lib1","SARS-CoV-2","CGACAGGAAGCAATAA",2,5.59,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A81F N118D L183T",3
"lib1","SARS-CoV-2","CGACAGGACTGGTCTA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","C6* L57T N107Y",3
"lib1","SARS-CoV-2","CGACAGGATTAAGAAG",2,8.32,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","Y35C I88Y V103E L131K V173I P197T",6
"lib1","SARS-CoV-2","CGACAGGGTCGTCAGC",4,69.16,9.27,-1.5,0.13,1.74,1.11,0.01,">1 nonsynonymous","T46S W106A P149L",3
"lib1","SARS-CoV-2","CGACAGTACAACACAT",4,42.51,6.06,-4.71,0.65,1.5,1.1,0.01,">1 nonsynonymous","A14S S53P D97R P133L P149D G155N",6
"lib1","SARS-CoV-2","CGACAGTCACGTAGCG",2,26.15,10.68,-0.09,0.11,2.79,1.17,0,"1 nonsynonymous","Q84S",1
"lib1","SARS-CoV-2","CGACAGTGATTAGTAA",2,8.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Q79S A105I Y123M",3
"lib1","SARS-CoV-2","CGACAGTTATTAAGAT",2,11.61,10.24,-0.53,0.14,2.92,1,0.01,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","CGACAGTTGAACAGAA",11,89.15,6,-4.76,2,3,1.19,0,">1 nonsynonymous","T3S V20E Y39M D112T",4
"lib1","SARS-CoV-2","CGACATAAGGAAGTAA",1,10.29,10.53,-0.23,0.07,2.99,1,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","CGACATAATAGCACAT",3,145.97,10.29,-0.47,0.04,2.91,1.03,0,">1 nonsynonymous","D90A G155S",2
"lib1","SARS-CoV-2","CGACATACATAATTCC",10,66.63,10.27,-0.5,0.03,2.94,1.01,0,">1 nonsynonymous","L60A K87C",2
"lib1","SARS-CoV-2","CGACATACATATTCTA",8,66.1,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49M D90V Y143V",3
"lib1","SARS-CoV-2","CGACATACCTAACAGG",8,110.7,10.14,-0.62,0.06,2.84,1,0,">1 nonsynonymous","I28M Y35M V103L",3
"lib1","SARS-CoV-2","CGACATACTAAAGTAA",4,33.3,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K56W D90H I142S T201H",4
"lib1","SARS-CoV-2","CGACATATAAAAATAT",6,61.58,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S19W W106L D112E",3
"lib1","SARS-CoV-2","CGACATATAAAGTCAA",1,47.59,10.53,-0.23,0.05,2.95,1.04,0,">1 nonsynonymous","S41H K48Q",2
"lib1","SARS-CoV-2","CGACATATATTATAAC",5,1.22,NA,NA,NA,NA,NA,NA,"stop","F12L N24L G83S W106* A145C Q163H",6
"lib1","SARS-CoV-2","CGACATCAGTGCCTGT",1,12.2,10.71,-0.05,0.09,2.9,1.01,0.01,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","CGACATCATATAGGGC",6,30.75,9.85,-0.91,0.13,2.57,1.11,0.01,">1 nonsynonymous","T85F S139N T193I",3
"lib1","SARS-CoV-2","CGACATCTACTTGGTA",5,29.81,6,-4.76,2,3,1.16,0,">1 nonsynonymous","S19R T100A Y119M",3
"lib1","SARS-CoV-2","CGACATGAAGCCCGGC",5,115.83,10.23,-0.53,0.05,2.8,1.05,0,"1 nonsynonymous","S139Y",1
"lib1","SARS-CoV-2","CGACATGAGCAGCAAA",1,9.87,9.84,-0.92,0.09,1.92,1.11,0,">1 nonsynonymous","G9P Y91K P149L",3
"lib1","SARS-CoV-2","CGACATGATAAAGAAG",1,36.7,10.25,-0.52,0.06,2.87,1.04,0,"1 nonsynonymous","V65S",1
"lib1","SARS-CoV-2","CGACATGCAAGGGATC",5,1.52,NA,NA,NA,NA,NA,NA,"stop","W23K D34S G86I D137F G152*",5
"lib1","SARS-CoV-2","CGACATGCCTTTGAGC",1,13.18,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L5W V20G A89M D97Y G117I Y165R Y175V",7
"lib1","SARS-CoV-2","CGACATGGAGTCTATA",4,55.7,10.52,-0.25,0.07,2.95,1.02,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","CGACATGTTGCAAACA",6,35.44,8.85,-1.92,0.08,2.79,1.08,0,">1 nonsynonymous","F12L S113T",2
"lib1","SARS-CoV-2","CGACATTAAATTGGGA",7,25.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G83T I88K F99V I138T F156P",5
"lib1","SARS-CoV-2","CGACATTACAACAAAG",2,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V D34Y N120S",3
"lib1","SARS-CoV-2","CGACATTACACTGAAA",5,14.41,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P54K A81R P82T D97L V103R Y121N S129P V182C",8
"lib1","SARS-CoV-2","CGACATTACGTCCATC",2,22.75,10.22,-0.55,0.06,2.94,1.04,0,">1 nonsynonymous","S45Q C61P K128G",3
"lib1","SARS-CoV-2","CGACATTACGTGATGA",8,33.68,6,-4.76,1.79,1.5,1.21,0.01,">1 nonsynonymous","A14P I28L P82M R127M S139G",5
"lib1","SARS-CoV-2","CGACATTACTGGCAGT",13,124,10.64,-0.13,0.05,2.94,1.02,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","CGACATTATTTGCACT",3,32.66,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y35R K56T Y143N P161G V180A",5
"lib1","SARS-CoV-2","CGACATTCCTCCCTTA",2,26.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9R S43C F62E A81Y T85S",5
"lib1","SARS-CoV-2","CGACATTGAAGAAAAC",12,210.99,7.49,-3.28,0.25,1.5,1.11,0.02,">1 nonsynonymous","A14T C31I S43P S53L S69L N110A",6
"lib1","SARS-CoV-2","CGACATTTGATGAAAT",8,75.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R K94N N109D Y121L",4
"lib1","SARS-CoV-2","CGACCAAAAGGATGAG",2,24.71,9.72,-1.05,0.08,2.32,1.07,0,">1 nonsynonymous","Y121S S129Y",2
"lib1","SARS-CoV-2","CGACCAAAGGATATCT",2,1.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CGACCAAAGGGCAGAA",3,24.87,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","R16V V77E D90M D98I",4
"lib1","SARS-CoV-2","CGACCAAAGTAACGAA",3,78.39,9.68,-1.08,0.06,2.75,1.13,0,">1 nonsynonymous","K132F T170K",2
"lib1","SARS-CoV-2","CGACCAACAGACAATA",2,32.73,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","N4S V103L I142K",3
"lib1","SARS-CoV-2","CGACCAACCAGTCAAA",2,12.17,8.23,-2.53,0.26,1.82,1.09,0.03,">1 nonsynonymous","Y91C G117E T148S",3
"lib1","SARS-CoV-2","CGACCAAGTTATCCTA",1,12.48,10.75,-0.01,0.1,2.83,1.14,0.01,"1 nonsynonymous","F44W",1
"lib1","SARS-CoV-2","CGACCAATAAAGAATG",2,13.5,6.56,-4.2,0.64,1.5,1.16,0.05,">1 nonsynonymous","T3L T85C G101I",3
"lib1","SARS-CoV-2","CGACCAATAGCTATGG",7,51.73,9.62,-1.15,0.14,1.86,1.15,0.01,">1 nonsynonymous","F12D L122M",2
"lib1","SARS-CoV-2","CGACCACAACAAAAAT",1,19.92,10.61,-0.15,0.11,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACCACAACACCCGA",3,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V K94Y A145R",3
"lib1","SARS-CoV-2","CGACCACATGACCCAT",5,33.15,7.8,-2.96,0.39,1.5,1,0.04,">1 nonsynonymous","T3I S43R L95Y W106A",4
"lib1","SARS-CoV-2","CGACCACCTTAGCGAC",3,28.24,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S147L G172F",2
"lib1","SARS-CoV-2","CGACCACGATACCGCA",4,46.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L Q168L",2
"lib1","SARS-CoV-2","CGACCACGGGTAGAGT",7,89.62,10.73,-0.03,0.08,2.86,1.11,0,">1 nonsynonymous","G9D L111D",2
"lib1","SARS-CoV-2","CGACCACGTTACATCT",7,2.72,NA,NA,NA,NA,NA,NA,"stop","S19K A67P S139*",3
"lib1","SARS-CoV-2","CGACCACTAGCCAAAA",7,95.09,10.64,-0.12,0.06,2.9,1.06,0,"1 nonsynonymous","K87F",1
"lib1","SARS-CoV-2","CGACCAGAACTTAAGT",2,4.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","CGACCAGAGATAAATA",17,140.32,10.63,-0.13,0.05,2.88,1.04,0,">1 nonsynonymous","C61L P149W Q163V",3
"lib1","SARS-CoV-2","CGACCAGAGTACCCTA",3,8.89,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9W F47N T55F V103P",4
"lib1","SARS-CoV-2","CGACCAGAGTTAATAT",10,5.1,NA,NA,NA,NA,NA,NA,"stop","A18* E141N",2
"lib1","SARS-CoV-2","CGACCAGCACACTAGT",3,76.38,10.49,-0.28,0.06,2.96,1,0,">1 nonsynonymous","D98Y K128N",2
"lib1","SARS-CoV-2","CGACCAGCGACCGGCT",1,65.5,10.56,-0.2,0.04,2.88,1.04,0,"1 nonsynonymous","N120F",1
"lib1","SARS-CoV-2","CGACCAGGTTAAGGAA",6,39.32,6.49,-4.27,0.54,1.5,1.2,0.02,">1 nonsynonymous","V71N Y119T",2
"lib1","SARS-CoV-2","CGACCATTTAATATGT",10,89.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F R179S",2
"lib1","SARS-CoV-2","CGACCCAACTTAAAAA",2,14.44,10.89,0.13,0.14,2.88,1.07,0,">1 nonsynonymous","L5M E141V",2
"lib1","SARS-CoV-2","CGACCCAACTTTTCGG",1,28.71,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","Y50G K56L",2
"lib1","SARS-CoV-2","CGACCCACAAAATGTT",1,5.09,10.3,-0.46,0.35,1.94,1,0.02,">1 nonsynonymous","I2S D34L T201G",3
"lib1","SARS-CoV-2","CGACCCACAGAAACAG",2,5.65,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","S41H A89Q A105L S164G",4
"lib1","SARS-CoV-2","CGACCCACCATTTGAT",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M N107Y Y119M G172L",4
"lib1","SARS-CoV-2","CGACCCATACTCATGA",2,128.39,8.33,-2.43,0.14,2.4,1.12,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","CGACCCCAAGTAATTA",1,37.82,6.3,-4.46,0.5,1.5,1.17,0.01,">1 nonsynonymous","S41R D112A",2
"lib1","SARS-CoV-2","CGACCCCCAAGTCGAT",3,8.84,8.67,-2.1,0.25,1.5,1.02,0.04,">1 nonsynonymous","S43G P96F N110T",3
"lib1","SARS-CoV-2","CGACCCCCGACGAAAA",1,56.71,9,-1.77,0.07,2.75,1.06,0,">1 nonsynonymous","A42P C61V G117R K198R",4
"lib1","SARS-CoV-2","CGACCCGAAATCAATT",2,12.61,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A14F V37M A89R P96T V103I Y143A",6
"lib1","SARS-CoV-2","CGACCCGACCCCACCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","CGACCCGATAAACCTA",9,95.45,10.78,0.01,0.04,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACCCGGTATTAAGG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","C49D V77L K87* K128R F134I T148L",6
"lib1","SARS-CoV-2","CGACCCTGACAATAGA",3,59.29,10.71,-0.05,0.07,2.91,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CGACCCTGACCTAACA",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R D75V Q84L T100S N120T",5
"lib1","SARS-CoV-2","CGACCCTTACAATTCA",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46A N64H F99R P149L",4
"lib1","SARS-CoV-2","CGACCGAACGATTTAA",1,12.64,10.82,0.05,0.14,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGACCGATACTTCCGC",3,60.24,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R127L I142G",2
"lib1","SARS-CoV-2","CGACCGATTTTTATGG",1,30.54,6.05,-4.72,1.18,1.5,1.2,0.02,">1 nonsynonymous","G9S A105P",2
"lib1","SARS-CoV-2","CGACCGCTAGTATGAA",2,44.07,9.57,-1.19,0.08,2.84,1.15,0,">1 nonsynonymous","Q176S A190G T201D",3
"lib1","SARS-CoV-2","CGACCGCTCCATTTAT",15,72.81,6.04,-4.72,0.69,1.5,1.19,0.01,">1 nonsynonymous","F70H E141H",2
"lib1","SARS-CoV-2","CGACCGCTTAAATGAA",2,57.98,10.5,-0.26,0.05,2.94,1.05,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","CGACCGGATCATTATA",6,32.11,6,-4.76,1.46,1.5,1.08,0.01,">1 nonsynonymous","L60E N118M K132H T170V",4
"lib1","SARS-CoV-2","CGACCGGGGTAACAAA",1,13.72,10.28,-0.48,0.13,2.59,1.01,0.01,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","CGACCGGTTAAGCGGG",4,71.04,10.82,0.06,0.06,2.92,1.05,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","CGACCGTACTTGCGAC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","D90R K199*",2
"lib1","SARS-CoV-2","CGACCGTCCTATTAAA",2,27.07,10.7,-0.06,0.08,2.94,1,0,"1 nonsynonymous","F62H",1
"lib1","SARS-CoV-2","CGACCTAAATTAATAA",2,8.34,7.45,-3.32,0.38,1.54,1.12,0.03,">1 nonsynonymous","V37M D97P G116R Y123T G196W",5
"lib1","SARS-CoV-2","CGACCTAAATTTAGTT",6,43.16,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88G R127S K199T",3
"lib1","SARS-CoV-2","CGACCTAACCAATCGG",1,0.55,NA,NA,NA,NA,NA,NA,"stop","S36* D97* G174Q",3
"lib1","SARS-CoV-2","CGACCTACTAAACGAG",4,77.87,7.36,-3.4,0.19,1.5,1.14,0.01,">1 nonsynonymous","S29P G172S",2
"lib1","SARS-CoV-2","CGACCTACTATTCCAA",6,57.76,10.7,-0.07,0.05,2.9,1.05,0,">1 nonsynonymous","E10D T55H",2
"lib1","SARS-CoV-2","CGACCTAGAGAATAAC",2,21.53,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","Y35P S139P",2
"lib1","SARS-CoV-2","CGACCTAGAGTACTAA",1,14.77,6,-4.76,2,3,1.2,0.05,">1 nonsynonymous","D90N A105N Q176R",3
"lib1","SARS-CoV-2","CGACCTCATAAGTTAC",3,104.14,10.74,-0.03,0.04,2.95,1.03,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","CGACCTCGTAGCCCTT",6,84.3,9.7,-1.06,0.11,1.98,1.05,0,">1 nonsynonymous","C6R P149G",2
"lib1","SARS-CoV-2","CGACCTCTAACAGTCC",12,58.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8I A42R C150V Y165R G174A",5
"lib1","SARS-CoV-2","CGACCTCTTTAAGGTA",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A A42P D97T W106S Y123T A192M",6
"lib1","SARS-CoV-2","CGACCTGACTACCAAT",4,91.81,9.88,-0.88,0.07,2.21,1.07,0,">1 nonsynonymous","C6Y L57W",2
"lib1","SARS-CoV-2","CGACCTGATAAAATGG",1,58.5,10.53,-0.23,0.06,2.93,1.03,0,"1 nonsynonymous","R136Q",1
"lib1","SARS-CoV-2","CGACCTGCCAACCACT",6,65.68,10.71,-0.05,0.05,2.89,1.04,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","CGACCTGTTCATTTTT",2,13.52,7.89,-2.88,0.24,2.49,1.12,0.02,">1 nonsynonymous","A14T N64G I104F F126G E154T",5
"lib1","SARS-CoV-2","CGACCTTAATCGAAAA",3,0.68,NA,NA,NA,NA,NA,NA,"stop","Y35M Y143F T201*",3
"lib1","SARS-CoV-2","CGACCTTAGAATGTGG",6,987.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K56M L122G E141R F156A L183H",5
"lib1","SARS-CoV-2","CGACCTTCCACGCCTC",8,119.07,9.93,-0.84,0.08,2.18,1.03,0,">1 nonsynonymous","S19K A42Q K56L",3
"lib1","SARS-CoV-2","CGACGAAAACACAGAA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","K94* S113L",2
"lib1","SARS-CoV-2","CGACGAAAAGATCAAA",1,29.02,10.78,0.02,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACGAAAATGGAGAG",3,51.76,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S45C G86V",2
"lib1","SARS-CoV-2","CGACGAATATTAAGTG",3,41.04,10.73,-0.03,0.06,2.89,1.01,0,"1 nonsynonymous","E186D",1
"lib1","SARS-CoV-2","CGACGAATCAACCAAG",1,17.27,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F160I Q168P",2
"lib1","SARS-CoV-2","CGACGACATATTCTTG",1,3.27,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CGACGACATCTAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* S113D",2
"lib1","SARS-CoV-2","CGACGACGACTAGAGA",1,28.27,9.75,-1.01,0.16,1.86,1.09,0.01,">1 nonsynonymous","L60W D98L G155T",3
"lib1","SARS-CoV-2","CGACGAGAATATGCAC",4,32.82,10.46,-0.3,0.06,2.86,1.07,0,">1 nonsynonymous","F44G K56E A192Q",3
"lib1","SARS-CoV-2","CGACGAGACAAAATTC",5,19.39,9.32,-1.44,0.17,1.82,1.16,0.01,">1 nonsynonymous","S139W G196L",2
"lib1","SARS-CoV-2","CGACGAGATACGATTC",4,100.6,10.16,-0.6,0.06,2.85,1.04,0,"1 nonsynonymous","G155I",1
"lib1","SARS-CoV-2","CGACGAGGACAGCTAT",8,70.34,6.01,-4.76,1.13,1.5,1.2,0.02,">1 nonsynonymous","Y50A P133R",2
"lib1","SARS-CoV-2","CGACGAGGTCCCCACT",3,50.4,10.72,-0.04,0.05,2.88,1.07,0,">1 nonsynonymous","N64Y S147L",2
"lib1","SARS-CoV-2","CGACGAGTGGTCAATC",2,12.65,7.15,-3.62,0.49,1.5,1.04,0.07,">1 nonsynonymous","C49L N64L Q144P G152R",4
"lib1","SARS-CoV-2","CGACGATCATAACGTA",2,27.54,6,-4.76,1.38,1.5,1.14,0.02,">1 nonsynonymous","F44E T100P L162S",3
"lib1","SARS-CoV-2","CGACGATGTAACTAGT",2,43.24,10.7,-0.06,0.03,2.97,1.01,0,">1 nonsynonymous","E10D P149Y",2
"lib1","SARS-CoV-2","CGACGCAAGAACCATG",3,18.69,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C102D T148G K198A",3
"lib1","SARS-CoV-2","CGACGCATACGTAGAT",8,112.13,10.57,-0.2,0.04,2.85,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CGACGCCGAGGCAACG",2,25.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4V Y50T Y93L",3
"lib1","SARS-CoV-2","CGACGCGAACTCCATG",2,0.37,NA,NA,NA,NA,NA,NA,"stop","Q84* K94C V103L N171C",4
"lib1","SARS-CoV-2","CGACGCGGCGATAAGT",1,29.19,10.3,-0.46,0.08,2.83,1.02,0,">1 nonsynonymous","D59V N151T",2
"lib1","SARS-CoV-2","CGACGCTATTACCATC",2,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y A105M",2
"lib1","SARS-CoV-2","CGACGCTGGCATATAG",4,58.74,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9N N30K N157A P177S",4
"lib1","SARS-CoV-2","CGACGCTTAATAATTA",13,3.63,NA,NA,NA,NA,NA,NA,"stop","N58* Y91F Y165S",3
"lib1","SARS-CoV-2","CGACGCTTGAGCCTGT",1,22.76,6,-4.76,2,3,1.09,0,">1 nonsynonymous","G101D A105F Y119S S147F",4
"lib1","SARS-CoV-2","CGACGGAAATCTATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* F99I N120W",3
"lib1","SARS-CoV-2","CGACGGAAATCTTAAC",2,25.49,7.32,-3.44,0.34,1.5,1.11,0.04,">1 nonsynonymous","I28H N120Y I142F S164Y",4
"lib1","SARS-CoV-2","CGACGGCTGCGTCATA",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18Q S45R T63V F70K",4
"lib1","SARS-CoV-2","CGACGGGCATATTAGA",1,16.22,10.76,-0.01,0.07,2.81,1.16,0,"1 nonsynonymous","R78C",1
"lib1","SARS-CoV-2","CGACGTAACGATGCCA",1,5.01,NA,NA,NA,NA,NA,NA,"stop","A14N C150*",2
"lib1","SARS-CoV-2","CGACGTACAACCCAGT",2,49.17,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86Q K114T P177S",3
"lib1","SARS-CoV-2","CGACGTACTAGCTCAT",2,16.05,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L60Q D68A D137V",3
"lib1","SARS-CoV-2","CGACGTACTTAAGGCC",1,40.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40G T85H Y91N F99L",4
"lib1","SARS-CoV-2","CGACGTAGTAACTCGA",6,42.8,6,-4.76,2,2.04,1.2,0.01,">1 nonsynonymous","R27E W106L G117C Y143A",4
"lib1","SARS-CoV-2","CGACGTCAGCCAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49L Y121*",2
"lib1","SARS-CoV-2","CGACGTTCAAAAAAAT",4,65.17,8.39,-2.38,0.15,1.7,1.1,0.01,">1 nonsynonymous","N107L I142M",2
"lib1","SARS-CoV-2","CGACTAAAAGTTTGTT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","D34Q W106R G146V G155*",4
"lib1","SARS-CoV-2","CGACTAAACAACGAAT",1,23.73,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2P A89P V103C Y121R",4
"lib1","SARS-CoV-2","CGACTAAACCCACCCT",2,19.2,6,-4.76,0.54,3,1.06,0,">1 nonsynonymous","K56Q L95K I138H",3
"lib1","SARS-CoV-2","CGACTAAAGAGTCTAG",2,20.84,9.86,-0.91,0.09,2.14,1.03,0,">1 nonsynonymous","S45F N130S E141V",3
"lib1","SARS-CoV-2","CGACTAAATTACTTGA",2,7.3,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L95S E135I",2
"lib1","SARS-CoV-2","CGACTAAATTGCAACC",6,6,NA,NA,NA,NA,NA,NA,"stop","N4S Y143* N157V",3
"lib1","SARS-CoV-2","CGACTAACCAGGTGCA",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S T85I A89K N130I",4
"lib1","SARS-CoV-2","CGACTAAGGTCGAATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G S139W F160A",3
"lib1","SARS-CoV-2","CGACTAATGCATATGC",1,19.06,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","C102H P149G",2
"lib1","SARS-CoV-2","CGACTAATGTACTTAG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","Y21* G51S D97L S139E Y159A",5
"lib1","SARS-CoV-2","CGACTACAAAAAATTT",1,33.58,10.48,-0.29,0.09,2.79,1.08,0,">1 nonsynonymous","K56Y S184V",2
"lib1","SARS-CoV-2","CGACTACAAATAAAGT",2,22.35,10.57,-0.19,0.12,2.97,1.02,0.01,"1 nonsynonymous","I2D",1
"lib1","SARS-CoV-2","CGACTACAACGAATGG",2,42.7,9.77,-1,0.13,1.94,1.1,0.01,"1 nonsynonymous","F17T",1
"lib1","SARS-CoV-2","CGACTACAGAACAACG",3,35.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L38M G74H Y91V",3
"lib1","SARS-CoV-2","CGACTACCCGACCAAT",3,26.18,10.76,-0.01,0.05,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACTACCTAATCCCA",8,91.27,10.72,-0.04,0.05,2.9,1.05,0,">1 nonsynonymous","N110K G146A",2
"lib1","SARS-CoV-2","CGACTACCTGCTGGAC",8,143.59,10.49,-0.28,0.04,2.92,1,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","CGACTACTTAATTACA",2,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L W106D K114V P161N",4
"lib1","SARS-CoV-2","CGACTAGAACCCATGC",1,15.13,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N4L A14C N64T Y119S P149Y N157V",6
"lib1","SARS-CoV-2","CGACTAGAAGGTAAAC",7,114.67,10.86,0.09,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACTAGACTAATAAA",1,2.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","CGACTAGCAATCATTT",8,0.1,NA,NA,NA,NA,NA,NA,"stop","R27L K87* V173L",3
"lib1","SARS-CoV-2","CGACTAGCTAAGAGAA",1,13.95,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","C61Y V103S",2
"lib1","SARS-CoV-2","CGACTAGTACTCGAAA",3,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M K128R",2
"lib1","SARS-CoV-2","CGACTATACGTCCGTC",9,153.76,10.62,-0.14,0.04,2.9,1.03,0,">1 nonsynonymous","C61G S184H",2
"lib1","SARS-CoV-2","CGACTATAGTAGGATA",2,59.89,6,-4.76,2,3,1.17,0,">1 nonsynonymous","E10C G86A",2
"lib1","SARS-CoV-2","CGACTATCTACAATCG",2,23.47,6.99,-3.78,0.33,1.5,1.06,0.03,">1 nonsynonymous","I2T A105P",2
"lib1","SARS-CoV-2","CGACTCACGGTACAAT",4,42.92,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C31R Y66A A105G N120L G155L E186S",6
"lib1","SARS-CoV-2","CGACTCACTATATGAC",13,256.45,10.22,-0.55,0.03,2.83,1.01,0,">1 nonsynonymous","P96N I142L",2
"lib1","SARS-CoV-2","CGACTCAGCGAATTGA",3,24.19,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","R27Q D90N W106L R136S F160S F167K R179D",7
"lib1","SARS-CoV-2","CGACTCATGTTGGCAA",2,73.62,10.59,-0.18,0.04,2.87,1.07,0,">1 nonsynonymous","S129M C195N",2
"lib1","SARS-CoV-2","CGACTCCAAGTAGCCT",2,11.03,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","D59L G101C T201W",3
"lib1","SARS-CoV-2","CGACTCCATTATCTGC",7,118.3,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","R179Y",1
"lib1","SARS-CoV-2","CGACTCCTCAAGACGC",6,74.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53L D59A V77F G174D",4
"lib1","SARS-CoV-2","CGACTCGAAAAACTAT",2,50.53,7.15,-3.62,0.22,1.69,1.15,0.02,"1 nonsynonymous","C150E",1
"lib1","SARS-CoV-2","CGACTCGCGGATCACA",3,55.4,10.86,0.1,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACTCGCTAGGATAC",4,48.29,9.81,-0.95,0.17,1.91,1.14,0.01,">1 nonsynonymous","D98A A105M",2
"lib1","SARS-CoV-2","CGACTCTAACAATCCC",2,7.29,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","Y35V N107Y L131V R179W",4
"lib1","SARS-CoV-2","CGACTCTTGATCCCAA",12,43.02,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","A42S I88S L95R V173G",4
"lib1","SARS-CoV-2","CGACTCTTGTAAACAC",3,56.06,10.84,0.08,0.1,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACTGAAGAAAACAC",4,60,6.01,-4.76,0.72,1.5,1.15,0.01,">1 nonsynonymous","F44S P54S D98R S108V T201K",5
"lib1","SARS-CoV-2","CGACTGAATATCTATA",1,16.69,9.8,-0.97,0.22,1.81,1.06,0.02,"1 nonsynonymous","Y50Q",1
"lib1","SARS-CoV-2","CGACTGAATCTACAAC",1,72.17,9.93,-0.83,0.08,2.6,1.04,0,">1 nonsynonymous","Y35T S45K",2
"lib1","SARS-CoV-2","CGACTGACAACACTGT",4,7.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6M F12T G74K G174F",4
"lib1","SARS-CoV-2","CGACTGACTTCCCGAT",3,46.7,8.4,-2.36,0.1,2.75,1.12,0.01,">1 nonsynonymous","S45C C61L K87V T170M",4
"lib1","SARS-CoV-2","CGACTGATGAGCCATT",4,38.9,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T3K G86V I104Y",3
"lib1","SARS-CoV-2","CGACTGCCATTAGTAC",5,25.06,10.68,-0.08,0.07,2.87,1.06,0,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","CGACTGGCTAACCCGA",3,29.59,6,-4.76,1.01,1.69,1.13,0,">1 nonsynonymous","Y93I Y175R P197T",3
"lib1","SARS-CoV-2","CGACTGGTAACTATTA",1,12.1,8.6,-2.16,0.33,2.58,1.09,0.01,">1 nonsynonymous","A81K K87G T140I",3
"lib1","SARS-CoV-2","CGACTGTATAGAGTTG",2,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L T15Y Y50I G155I A190G",5
"lib1","SARS-CoV-2","CGACTGTTAGCTTCAG",3,9.29,8.95,-1.82,0.15,2.52,1.08,0.01,">1 nonsynonymous","F62C A89N",2
"lib1","SARS-CoV-2","CGACTTAAGTATGAGA",4,35.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T3K V37G A105L P133F G174D R179D",6
"lib1","SARS-CoV-2","CGACTTACAGTCCCAA",3,70.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I28L F70A R136L R179T T201A",5
"lib1","SARS-CoV-2","CGACTTATACACGGAG",1,15.62,9.89,-0.87,0.14,2.1,1,0.01,"1 nonsynonymous","Y178K",1
"lib1","SARS-CoV-2","CGACTTATATGTTAGG",13,158.45,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N1S F126S L162N",3
"lib1","SARS-CoV-2","CGACTTCAAAAGTAAA",4,94.91,10.71,-0.05,0.06,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGACTTCAGCTCTCAA",3,26.06,6.03,-4.73,1.09,1.5,1.12,0.03,">1 nonsynonymous","T3F V11H N24L F70S",4
"lib1","SARS-CoV-2","CGACTTCATATCCCAA",11,1.97,NA,NA,NA,NA,NA,NA,"stop","N4G A42Y K48N N120* K128F",5
"lib1","SARS-CoV-2","CGACTTCCAGAAACGC",5,99.03,10.5,-0.26,0.06,2.92,1.03,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","CGACTTCGATCTGTCA",2,6.61,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","S45R C61S C102A",3
"lib1","SARS-CoV-2","CGACTTGCTTCCCACA",5,33.5,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A33Y N40F K56Y P82L P149C",5
"lib1","SARS-CoV-2","CGACTTGGCACCGCTG",3,6.41,10.8,0.03,0.13,2.91,1.02,0.01,">1 nonsynonymous","T85K P149A",2
"lib1","SARS-CoV-2","CGACTTTAATTAAGGG",3,33.26,10.22,-0.55,0.05,2.86,1.05,0,">1 nonsynonymous","L5D P149C F160M",3
"lib1","SARS-CoV-2","CGACTTTACAAACATT",6,104.96,10.81,0.04,0.06,2.89,1.04,0,">1 nonsynonymous","V37F D97N T140F H189Y",4
"lib1","SARS-CoV-2","CGACTTTGTAACAAAT",1,27.48,10.39,-0.38,0.06,2.95,1,0,">1 nonsynonymous","T3V E141C",2
"lib1","SARS-CoV-2","CGACTTTTGAATCGAT",2,50.86,8.95,-1.82,0.28,1.5,1,0.03,">1 nonsynonymous","S69E E154L",2
"lib1","SARS-CoV-2","CGAGAAAAAATAGCTC",2,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R A33N C49Y P54R S69W Y165S",6
"lib1","SARS-CoV-2","CGAGAAAAATCGCATG",4,11.07,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","S45C V77L D98I I104L G166Y",5
"lib1","SARS-CoV-2","CGAGAAAACCATGCAA",4,85.47,9.09,-1.68,0.14,1.81,1.11,0.01,">1 nonsynonymous","F8D R78C",2
"lib1","SARS-CoV-2","CGAGAAAATCACAAAT",5,14.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46K L60P D97Y C102P P133A",5
"lib1","SARS-CoV-2","CGAGAAACATATAATA",2,49.57,10.42,-0.35,0.12,2.66,1.08,0.01,">1 nonsynonymous","N171H G174P",2
"lib1","SARS-CoV-2","CGAGAAACCAGCGCAT",4,77.62,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31D S108V V115S L122C K132L",5
"lib1","SARS-CoV-2","CGAGAAACCATACCAT",9,133.32,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A18L I88M G116I G152F",4
"lib1","SARS-CoV-2","CGAGAAACCTGCAACA",3,74.93,10.05,-0.71,0.07,2.71,1.04,0,">1 nonsynonymous","N58L I142T",2
"lib1","SARS-CoV-2","CGAGAAACGAAACATA",2,7.78,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50V N64P I72C K114Q",4
"lib1","SARS-CoV-2","CGAGAAAGAACTAACC",1,41.32,6,-4.76,1.12,1.5,1.13,0.01,">1 nonsynonymous","S41H P177M",2
"lib1","SARS-CoV-2","CGAGAAAGAACTCAAT",4,9.41,6.67,-4.09,0.37,1.5,1.08,0.02,">1 nonsynonymous","P7V N58G E76R G155V",4
"lib1","SARS-CoV-2","CGAGAAAGTGAAAAAA",2,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R D68M",2
"lib1","SARS-CoV-2","CGAGAAATCGCTACAA",2,12.95,9.75,-1.02,0.32,1.85,1.12,0.06,">1 nonsynonymous","A42P V65M G116V Q144I",4
"lib1","SARS-CoV-2","CGAGAAATCTAAGCGC",10,31.47,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V11C V37N L57S V65R L95R G117K",6
"lib1","SARS-CoV-2","CGAGAAATGTTAAAAT",3,6.7,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","I88E",1
"lib1","SARS-CoV-2","CGAGAAATTATTTCAA",3,36.66,10.8,0.04,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGAACACGGTAGAC",4,103.33,10.71,-0.05,0.07,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGAACCTAAGCCAG",4,78.86,6.89,-3.88,0.52,1.5,1.12,0.05,">1 nonsynonymous","A81V W106G Y123L Q176Y",4
"lib1","SARS-CoV-2","CGAGAACCTTCGTTCA",2,12.65,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","T100P D112P G146A",3
"lib1","SARS-CoV-2","CGAGAACGAACTAGAC",5,87.18,10.83,0.06,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGAAGATAAAACAA",5,96.28,9.71,-1.05,0.12,2.03,1.1,0.01,">1 nonsynonymous","K48V R127H",2
"lib1","SARS-CoV-2","CGAGAAGCCGCAATGC",8,91.76,6,-4.76,1.39,1.5,1.12,0.01,">1 nonsynonymous","D112S P169N",2
"lib1","SARS-CoV-2","CGAGAAGCTAATCCAA",5,30.57,10.73,-0.03,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGAAGCTCTAGTTT",9,74.35,8.01,-2.76,0.42,1.5,1,0.06,">1 nonsynonymous","K87W A105L Y165V",3
"lib1","SARS-CoV-2","CGAGAAGGCGCAATGG",3,55.67,10.74,-0.03,0.08,2.87,1.01,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","CGAGAAGGGATATTTG",3,31.81,9.64,-1.13,0.05,2.75,1.04,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","CGAGAAGTGAAATAAA",5,24.06,10.14,-0.62,0.04,2.92,1,0,">1 nonsynonymous","C6G S41T",2
"lib1","SARS-CoV-2","CGAGAAGTTGTGATAA",2,11.77,6.03,-4.74,1.86,1.5,1.44,0.08,">1 nonsynonymous","Y66F A105V P133D H189G C195T",5
"lib1","SARS-CoV-2","CGAGAATAGAATAGGC",8,23.98,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","I104R I138S P149Q P169F",4
"lib1","SARS-CoV-2","CGAGAATAGAGAAAGG",11,2.09,NA,NA,NA,NA,NA,NA,"stop","T63* L188S",2
"lib1","SARS-CoV-2","CGAGAATATAGGATTA",3,26.59,9.29,-1.48,0.09,2.83,1.06,0,"1 nonsynonymous","Q163D",1
"lib1","SARS-CoV-2","CGAGAATATTCATACA",1,22.98,10.61,-0.16,0.07,2.84,1.08,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","CGAGAATTTCTAGAAC",5,26.8,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","E10L F99Y N107T Y121E",4
"lib1","SARS-CoV-2","CGAGACAAATAATCGG",9,22.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18Q N118F R136H V181F",4
"lib1","SARS-CoV-2","CGAGACAATTTCATAT",1,2.38,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","CGAGACAGCCAAACCA",2,70.33,8.54,-2.23,0.11,2.91,1.01,0.01,">1 nonsynonymous","S41V G166D",2
"lib1","SARS-CoV-2","CGAGACCAGATATAAC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q R179D",2
"lib1","SARS-CoV-2","CGAGACCATATATTTA",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M N13C Y35C G51Y I142S",5
"lib1","SARS-CoV-2","CGAGACCATCAAATGT",2,27.26,10.75,-0.01,0.08,2.98,1.01,0,"1 nonsynonymous","N64Q",1
"lib1","SARS-CoV-2","CGAGACCCACTAACAG",3,15.47,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A89L Y178H L183V",3
"lib1","SARS-CoV-2","CGAGACCCGATACTTA",5,39,10.12,-0.65,0.1,2.5,1,0.01,">1 nonsynonymous","A14G T85F",2
"lib1","SARS-CoV-2","CGAGACCCGATTTTAC",2,43.73,8.59,-2.17,0.18,1.5,1.2,0.01,">1 nonsynonymous","S53L A81R Y121N",3
"lib1","SARS-CoV-2","CGAGACCCTTTTACCT",1,7.29,10.62,-0.15,0.11,3,1,0,">1 nonsynonymous","L5E S29E K87L D97I",4
"lib1","SARS-CoV-2","CGAGACCGTGAAAGAC",2,62.52,10.75,-0.01,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGACGACCCAATTA",1,8.47,9.57,-1.2,0.25,1.73,1.2,0.03,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","CGAGACGATAAGAATA",12,3.06,NA,NA,NA,NA,NA,NA,"stop","Y93A L122*",2
"lib1","SARS-CoV-2","CGAGACTCAGTGGCCG",4,43.1,6.43,-4.33,0.66,1.5,1.3,0.04,">1 nonsynonymous","S53W A67F A105P",3
"lib1","SARS-CoV-2","CGAGACTCCTCTTGAA",3,22.36,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Y91L Y93C P169W",3
"lib1","SARS-CoV-2","CGAGACTTATCGAAGC",12,470.82,10.51,-0.25,0.04,2.89,1.06,0,">1 nonsynonymous","N4T K48R G116V",3
"lib1","SARS-CoV-2","CGAGAGAGCTTCGCAA",5,51.55,6.31,-4.45,0.56,1.5,1.13,0.02,">1 nonsynonymous","E10N G146D T170V",3
"lib1","SARS-CoV-2","CGAGAGATAAAATAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F17* V20M Y50N",3
"lib1","SARS-CoV-2","CGAGAGATAGATTCTT",10,123.46,10.61,-0.15,0.03,2.95,1,0,">1 nonsynonymous","S41F T46K",2
"lib1","SARS-CoV-2","CGAGAGATTATGTAGG",2,64.93,6.62,-4.15,0.26,1.5,1.1,0.01,">1 nonsynonymous","S36L T55S L162G",3
"lib1","SARS-CoV-2","CGAGAGATTCACTATT",1,29.16,9.52,-1.24,0.16,1.95,1.09,0.01,">1 nonsynonymous","F12K E141N",2
"lib1","SARS-CoV-2","CGAGAGATTGCGTGAC",5,64.43,10.26,-0.5,0.07,2.7,1.03,0,">1 nonsynonymous","G51E S129N",2
"lib1","SARS-CoV-2","CGAGAGCTTAAGACAG",6,265.33,10.43,-0.34,0.03,2.89,1.01,0,"1 nonsynonymous","S45R",1
"lib1","SARS-CoV-2","CGAGAGGACAACTTAG",4,55.74,10.65,-0.11,0.04,2.86,1.06,0,"1 nonsynonymous","V115E",1
"lib1","SARS-CoV-2","CGAGAGGAGACAGATA",2,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E C49R F99S",3
"lib1","SARS-CoV-2","CGAGAGGCGGTAAGGT",3,0.76,NA,NA,NA,NA,NA,NA,"stop","A105T Y123M D137* S147P",4
"lib1","SARS-CoV-2","CGAGAGGTAATTAAAA",6,125.92,10.28,-0.48,0.03,2.82,1.03,0,">1 nonsynonymous","D34R P197L",2
"lib1","SARS-CoV-2","CGAGAGTGACCGATGA",4,61.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37P K87V Y143T N157V",4
"lib1","SARS-CoV-2","CGAGAGTGGTAGGACA",5,50.58,6.52,-4.25,0.62,1.5,1.27,0.04,">1 nonsynonymous","A18K P54T Y119F F134R E141S",5
"lib1","SARS-CoV-2","CGAGAGTTTGATCCGG",4,22.68,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","I88N N120Y",2
"lib1","SARS-CoV-2","CGAGATAATCCAATGA",1,17.22,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D112P E135Y F156V",3
"lib1","SARS-CoV-2","CGAGATAATTAACAGC",2,7.69,9.67,-1.1,0.18,2.59,1.03,0.01,">1 nonsynonymous","L5S G116L S139I G166N",4
"lib1","SARS-CoV-2","CGAGATAGCCCAATCA",4,50.08,10.75,-0.02,0.05,2.9,1,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","CGAGATATCTCACAAC",1,47.5,10.08,-0.69,0.08,2.74,1.02,0,">1 nonsynonymous","Y35E I142V",2
"lib1","SARS-CoV-2","CGAGATATTACCAAAC",6,69.89,10.73,-0.04,0.05,2.93,1.03,0,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","CGAGATGAGGGCAGAA",2,46.57,9.76,-1.01,0.06,2.81,1.05,0,">1 nonsynonymous","D98L S164G A190T",3
"lib1","SARS-CoV-2","CGAGATGATGCAGCAG",4,118.21,10.72,-0.04,0.07,2.91,1.07,0,"1 nonsynonymous","F44Y",1
"lib1","SARS-CoV-2","CGAGATGCCACATATT",7,122,10.22,-0.55,0.08,2.73,1,0,">1 nonsynonymous","G9Q T15I T63V",3
"lib1","SARS-CoV-2","CGAGATGCCCAAAAGT",1,12.09,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","T3Y K56S S69I I72E",4
"lib1","SARS-CoV-2","CGAGATGCCGTACATG",8,207.5,10.09,-0.68,0.04,2.9,1.02,0,">1 nonsynonymous","V37R F126H",2
"lib1","SARS-CoV-2","CGAGATGCCTTACTTC",4,70.06,10.82,0.06,0.05,2.92,1.04,0,">1 nonsynonymous","K128H S200Q",2
"lib1","SARS-CoV-2","CGAGATTATCGCCTGG",8,5.1,NA,NA,NA,NA,NA,NA,"stop","R27* Y91V P96T",3
"lib1","SARS-CoV-2","CGAGATTGAGCGAAAG",5,56.76,9.85,-0.92,0.08,2.12,1.02,0,">1 nonsynonymous","L5G T55F Q79R",3
"lib1","SARS-CoV-2","CGAGATTTCCAATGGA",1,29.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8N A105I G155A",3
"lib1","SARS-CoV-2","CGAGATTTGGTCACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F62* R73L Q144P",3
"lib1","SARS-CoV-2","CGAGCAAACAGAGGAC",4,5.4,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","A14S Y50I K56P Y91S N107L G117F",6
"lib1","SARS-CoV-2","CGAGCAAACGTTCGAA",8,144.28,8.66,-2.11,0.16,2.25,1.15,0.01,">1 nonsynonymous","V32A N109S L122V G174A",4
"lib1","SARS-CoV-2","CGAGCAAAGCAATGAA",3,43.68,10.65,-0.11,0.06,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGCAAAGGGGCACA",2,0,NA,NA,NA,NA,NA,NA,"stop","L38Q D98* N107T D112E F134V",5
"lib1","SARS-CoV-2","CGAGCAAATTACGAGT",3,31.76,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","D68E Y121N T148I A190H",4
"lib1","SARS-CoV-2","CGAGCAAATTGAAACC",2,59.24,9.99,-0.78,0.07,2.28,1.02,0,">1 nonsynonymous","N58S A81C C195F",3
"lib1","SARS-CoV-2","CGAGCAAGAACAGAAC",5,70.48,10.09,-0.68,0.07,2.86,1.02,0,">1 nonsynonymous","Q84R I142H",2
"lib1","SARS-CoV-2","CGAGCACCAGTGGTTA",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R A33C S41H L60V A89F",5
"lib1","SARS-CoV-2","CGAGCACCATCAATCC",4,30.53,9.75,-1.02,0.07,2.89,1.01,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","CGAGCAGATAAAAAGA",3,2.04,NA,NA,NA,NA,NA,NA,"stop","L5I T15* V181A",3
"lib1","SARS-CoV-2","CGAGCAGATACCAATA",1,51.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S Y119A G152I",3
"lib1","SARS-CoV-2","CGAGCATAAACCCGTT",6,31.19,10.72,-0.04,0.11,2.7,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGCATAACAGTAAC",4,47.72,10.6,-0.16,0.04,2.97,1.02,0,">1 nonsynonymous","C61Y G83N",2
"lib1","SARS-CoV-2","CGAGCATAATACCTCC",2,0.35,NA,NA,NA,NA,NA,NA,"stop","F99S Y123P G146* V182C",4
"lib1","SARS-CoV-2","CGAGCATAGCAAAATA",8,2.37,NA,NA,NA,NA,NA,NA,"stop","I104C G116L G155V P197*",4
"lib1","SARS-CoV-2","CGAGCATATAGCGGTA",1,4.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","CGAGCATCAACATCAA",4,14.28,9.31,-1.45,0.18,2.4,1.15,0.01,">1 nonsynonymous","T3R R73L",2
"lib1","SARS-CoV-2","CGAGCATTACTCCATC",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104A R127S I138H",3
"lib1","SARS-CoV-2","CGAGCATTTAACGCAG",7,30.37,10.41,-0.35,0.32,1.5,1,0.05,">1 nonsynonymous","I2P G9A K48Y F70E D97K",5
"lib1","SARS-CoV-2","CGAGCCAAAAATAATG",9,23.15,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C6S P96M A145F",3
"lib1","SARS-CoV-2","CGAGCCAAATGCACGA",1,12.79,10.51,-0.25,0.12,2.98,1.05,0.01,">1 nonsynonymous","G83Y L122N",2
"lib1","SARS-CoV-2","CGAGCCAACCTGCCAC",4,33.36,10.41,-0.35,0.11,2.79,1.04,0,"1 nonsynonymous","F185V",1
"lib1","SARS-CoV-2","CGAGCCAAGCCTAACC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","G9D F17R K48N T55A L60T Y91E G101* S108E",8
"lib1","SARS-CoV-2","CGAGCCACAAAGGTTA",7,52.68,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N24L L57C K128P N151S V180I",5
"lib1","SARS-CoV-2","CGAGCCACCATCGTTC",3,21.43,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","L5R W23Q N40I Y143F",4
"lib1","SARS-CoV-2","CGAGCCAGAAAGGTAG",2,10.2,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","K94W D137N",2
"lib1","SARS-CoV-2","CGAGCCTAACCACACA",5,82.95,9.44,-1.32,0.07,2.77,1.11,0,">1 nonsynonymous","G116A S164L",2
"lib1","SARS-CoV-2","CGAGCCTACGGTGCGC",7,64.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I72K R127S E141P",3
"lib1","SARS-CoV-2","CGAGCCTATTTCTAAT",1,28.31,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N30M F62T I88S Y119N G152V T170P",6
"lib1","SARS-CoV-2","CGAGCCTTTACGACTT",2,31.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10L Y50H K56S A81K",4
"lib1","SARS-CoV-2","CGAGCGAATGAATTGA",4,10.73,7.23,-3.54,0.34,1.78,1.08,0.06,">1 nonsynonymous","L5T Y50S Y91S W106L Q168R",5
"lib1","SARS-CoV-2","CGAGCGAGGTAATTTC",2,48.79,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","A14F V77P Y178T",3
"lib1","SARS-CoV-2","CGAGCGATAGCAAAAG",6,1.14,NA,NA,NA,NA,NA,NA,"stop","N1G G9S Y35* F126L",4
"lib1","SARS-CoV-2","CGAGCGATTCTTATTA",5,15.65,8.67,-2.09,0.29,1.5,1.12,0.04,"1 nonsynonymous","L183T",1
"lib1","SARS-CoV-2","CGAGCGATTTATGGAT",4,79.77,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W106K Q176R",2
"lib1","SARS-CoV-2","CGAGCGCCAGCACTCA",4,54.1,7.66,-3.1,0.17,1.58,1.18,0.01,">1 nonsynonymous","I2W D97A F126N S139A G174K",5
"lib1","SARS-CoV-2","CGAGCGCTTACCAGCG",10,92.4,6,-4.76,2,1.94,1.18,0.01,">1 nonsynonymous","V32L I72E P96W Y143E",4
"lib1","SARS-CoV-2","CGAGCTAACTTAAGCT",1,26.39,10.2,-0.56,0.09,2.84,1.06,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","CGAGCTACATAAATTT",2,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V K94G P149S V173G",4
"lib1","SARS-CoV-2","CGAGCTACTCGCACAC",1,8.35,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","L95Q R124S E154L",3
"lib1","SARS-CoV-2","CGAGCTAGAATACAGA",4,124.29,8.02,-2.75,0.17,1.64,1.1,0.01,">1 nonsynonymous","K26S S113L",2
"lib1","SARS-CoV-2","CGAGCTCAAGATATGG",4,53.2,10.05,-0.72,0.08,2.77,1.01,0,">1 nonsynonymous","T3V P161S",2
"lib1","SARS-CoV-2","CGAGCTCAGGAGACCG",2,13.28,6.8,-3.96,0.27,1.5,1.08,0.01,">1 nonsynonymous","N13R A89W",2
"lib1","SARS-CoV-2","CGAGCTCCAGTATAAT",5,51.98,9.28,-1.48,0.06,2.83,1.13,0,">1 nonsynonymous","Y119W T201A",2
"lib1","SARS-CoV-2","CGAGCTCTAATATTAT",6,86.31,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R27V V37M V77K Y91Q Y119T A192F",6
"lib1","SARS-CoV-2","CGAGCTCTGTTGAGGG",9,206.25,9.25,-1.52,0.07,2.5,1.11,0,">1 nonsynonymous","K87R D90V E154L",3
"lib1","SARS-CoV-2","CGAGCTGAACGTGAGT",3,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S Y91M P161H",3
"lib1","SARS-CoV-2","CGAGCTTAAAGAATCA",1,30.19,10.69,-0.08,0.08,2.87,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGCTTACAATCACA",3,10.75,10.58,-0.18,0.13,3,1,0.01,">1 nonsynonymous","T63R D97E",2
"lib1","SARS-CoV-2","CGAGCTTACGGCTTGC",1,36.04,9.49,-1.27,0.1,2.31,1.2,0,">1 nonsynonymous","L38V T55F P169M",3
"lib1","SARS-CoV-2","CGAGCTTCCGCTACCA",5,75.05,8.32,-2.45,0.32,1.5,1,0.03,">1 nonsynonymous","S19G S139W",2
"lib1","SARS-CoV-2","CGAGCTTCTATAAACA",6,138.78,9.98,-0.78,0.05,2.85,1.03,0,">1 nonsynonymous","F62L T170K",2
"lib1","SARS-CoV-2","CGAGCTTGACCATGTG",1,5.77,7.71,-3.06,0.51,1.76,1.13,0.05,"1 nonsynonymous","Y165P",1
"lib1","SARS-CoV-2","CGAGCTTGTATTAAAG",9,69.48,10.65,-0.12,0.04,2.97,1,0,"1 nonsynonymous","Y39P",1
"lib1","SARS-CoV-2","CGAGGAAAAACTTCGA",5,2.69,NA,NA,NA,NA,NA,NA,"stop","N13Y D98* S139G G146S T201K",5
"lib1","SARS-CoV-2","CGAGGAAAACCCGGGC",2,49.72,10.67,-0.09,0.05,2.9,1.04,0,">1 nonsynonymous","G9P V153S Q168F",3
"lib1","SARS-CoV-2","CGAGGAAACGCTTATT",3,29.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N R136L",2
"lib1","SARS-CoV-2","CGAGGAAAGATTATGA",2,31.12,9.72,-1.05,0.13,2.27,1.09,0.01,">1 nonsynonymous","Y35T T100K E141V F160P",4
"lib1","SARS-CoV-2","CGAGGAAATGATGTTC",7,95.26,10.79,0.03,0.06,2.94,1.03,0,">1 nonsynonymous","I2H N64W",2
"lib1","SARS-CoV-2","CGAGGAACTGCAGTTC",2,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N13V F62M S113T",4
"lib1","SARS-CoV-2","CGAGGAAGAGGTTTTA",12,116.14,10.27,-0.49,0.03,2.79,1,0,">1 nonsynonymous","A33H S184Y",2
"lib1","SARS-CoV-2","CGAGGAATGCGACACT",6,32.8,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D112C T140C",2
"lib1","SARS-CoV-2","CGAGGAATTAACCAAA",3,24.86,6,-4.76,2,1.5,1.3,0.08,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","CGAGGACAAGGTTAAA",1,52.01,9.51,-1.26,0.07,2.79,1.07,0,">1 nonsynonymous","Y39D D90R G174K",3
"lib1","SARS-CoV-2","CGAGGACTATAGTAAA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","G9F K26N K48S L125* R136N Q144A P149I V182L",8
"lib1","SARS-CoV-2","CGAGGATACAATTCCA",1,28.36,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","I88V P96A S139L",3
"lib1","SARS-CoV-2","CGAGGATAGATCCAGT",3,41.62,10.73,-0.03,0.05,2.87,1.07,0,">1 nonsynonymous","T3S K48D",2
"lib1","SARS-CoV-2","CGAGGATCCTTAAATG",1,16.28,10.42,-0.34,0.06,2.45,1.06,0,">1 nonsynonymous","S29M L60T G155C",3
"lib1","SARS-CoV-2","CGAGGCAAGCGGACCG",4,89.34,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S36W A81D G101R D112R Y119V Y143A P177E",7
"lib1","SARS-CoV-2","CGAGGCAATTCCCGTT",2,38.35,10.16,-0.61,0.05,2.61,1.03,0,">1 nonsynonymous","Y39S R127S T201V",3
"lib1","SARS-CoV-2","CGAGGCAGAAAAGAAA",2,49.4,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A89I G101F C150I G155S",4
"lib1","SARS-CoV-2","CGAGGCAGTCAAAAAC",3,0.49,NA,NA,NA,NA,NA,NA,"stop","V37S A81V G117D F167*",4
"lib1","SARS-CoV-2","CGAGGCATATGAAAGG",6,149.34,8.84,-1.92,0.12,2.36,1.17,0.01,">1 nonsynonymous","F17M T55M N64I F156Q",4
"lib1","SARS-CoV-2","CGAGGCCAGGTCATCT",2,14.12,10.48,-0.28,0.13,2.65,1.05,0.01,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","CGAGGCGAGTATAGTA",7,73.59,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","E10N R25D C61T A89R W106V S139I P169S",7
"lib1","SARS-CoV-2","CGAGGCGATTTGAGTA",12,144.18,7.66,-3.11,0.32,1.5,1.12,0.03,">1 nonsynonymous","Y119E Y123L N130Y S139A E154P",5
"lib1","SARS-CoV-2","CGAGGCGCTCCCAAAA",3,30.41,9.92,-0.84,0.08,2.82,1,0,">1 nonsynonymous","D90E S129P I142L",3
"lib1","SARS-CoV-2","CGAGGCTCTACACGGA",1,32.55,6.33,-4.43,0.75,1.5,1.19,0.04,">1 nonsynonymous","I2P D90L A105I T170V",4
"lib1","SARS-CoV-2","CGAGGGAGACGTACAC",2,13.42,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R27T G86S D98H I104Y N120A",5
"lib1","SARS-CoV-2","CGAGGGAGTGAGGAAT",4,125.45,10.7,-0.07,0.04,2.94,1.03,0,">1 nonsynonymous","Q84S E186N",2
"lib1","SARS-CoV-2","CGAGGGAGTTATACAC",8,3.59,NA,NA,NA,NA,NA,NA,"stop","Y35Q D97*",2
"lib1","SARS-CoV-2","CGAGGGGTCCTATGGT",6,48.46,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C49R G146Q V173C",3
"lib1","SARS-CoV-2","CGAGGGTTAAGATAAA",4,75.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58C E141Y Q176M",3
"lib1","SARS-CoV-2","CGAGGGTTTCACGGTG",3,33.67,8.86,-1.9,0.08,1.92,1.05,0,">1 nonsynonymous","P54D Y121S P149A",3
"lib1","SARS-CoV-2","CGAGGTAAAACACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","P96* K114V R136T S184R A190L",5
"lib1","SARS-CoV-2","CGAGGTAAATGCAGTG",7,123.68,10.24,-0.52,0.03,2.86,1.04,0,">1 nonsynonymous","A89V K198R",2
"lib1","SARS-CoV-2","CGAGGTAAATGTTTCA",2,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L Y91S G146N",3
"lib1","SARS-CoV-2","CGAGGTAACAAGCTTA",2,61.19,9.81,-0.95,0.1,2.69,1.11,0,">1 nonsynonymous","C6G V37M L60T V153D",4
"lib1","SARS-CoV-2","CGAGGTAGACCTGTAG",5,51.08,9.9,-0.87,0.11,1.94,1.04,0,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","CGAGGTCGTCCCTAAA",4,44.81,6.42,-4.35,0.72,1.5,1.33,0.04,">1 nonsynonymous","I104Y Y178D",2
"lib1","SARS-CoV-2","CGAGGTCTTAAAAGAA",3,8.25,6,-4.76,2,3,1.07,0,">1 nonsynonymous","V11H Y21P L38Q P54H",4
"lib1","SARS-CoV-2","CGAGGTGGCGGATAAA",8,29.48,8.58,-2.19,0.3,1.5,1.04,0.03,">1 nonsynonymous","F47M K56I K94Y",3
"lib1","SARS-CoV-2","CGAGGTGTATTGTAAT",2,24.37,7.34,-3.43,0.4,1.55,1.14,0.06,"1 nonsynonymous","V180S",1
"lib1","SARS-CoV-2","CGAGGTTAGATGTTGA",1,1.37,NA,NA,NA,NA,NA,NA,"stop","C6* C31H E141Q S200P",4
"lib1","SARS-CoV-2","CGAGGTTGAAAAATAG",2,25.03,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V77E P82E D112S G174Y",4
"lib1","SARS-CoV-2","CGAGGTTGCTAATCAT",2,51.23,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K87A D112Q P169M",3
"lib1","SARS-CoV-2","CGAGGTTTAATAAAAT",2,25.81,10.31,-0.45,0.13,2.56,1,0.01,">1 nonsynonymous","N13S S41F T46S P149G T201L",5
"lib1","SARS-CoV-2","CGAGTAAACACCTTAC",2,57.56,10.69,-0.07,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGAGTAACTGTTAGTT",4,37.6,10.28,-0.49,0.11,2.61,1,0.01,">1 nonsynonymous","A14S A89S",2
"lib1","SARS-CoV-2","CGAGTAATCGTATGTG",1,43.17,10.75,-0.01,0.06,2.97,1.02,0,"1 nonsynonymous","S129V",1
"lib1","SARS-CoV-2","CGAGTATAAAACAAGG",2,0.72,NA,NA,NA,NA,NA,NA,"stop","Y35D E154F Q163* L183R P197T",5
"lib1","SARS-CoV-2","CGAGTATATGAACGCT",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50M G155C",2
"lib1","SARS-CoV-2","CGAGTCAACAAATAAA",11,16.57,6.15,-4.61,1.35,1.5,1.26,0.07,">1 nonsynonymous","S19R S41F N107L I138M S147A",5
"lib1","SARS-CoV-2","CGAGTCAAGTATATGC",3,94.76,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C31F S113W",2
"lib1","SARS-CoV-2","CGAGTCAGACTCCAGC",1,33.67,10.79,0.02,0.08,2.89,1.07,0,"1 nonsynonymous","P197I",1
"lib1","SARS-CoV-2","CGAGTCCGTTCTAAGT",4,42.21,10.14,-0.63,0.05,2.97,1,0,">1 nonsynonymous","D90N K114A T170W",3
"lib1","SARS-CoV-2","CGAGTCGATTGGGAGT",2,48.46,7.75,-3.02,0.13,2.05,1.11,0,">1 nonsynonymous","Y119M N157Q",2
"lib1","SARS-CoV-2","CGAGTGAACTCGACCA",8,75.29,7.15,-3.62,0.23,1.5,1.17,0.01,">1 nonsynonymous","V37T C61L K128M D137E",4
"lib1","SARS-CoV-2","CGAGTGAATGTAGCTA",3,77.77,10.26,-0.51,0.1,2.61,1,0,"1 nonsynonymous","L57Y",1
"lib1","SARS-CoV-2","CGAGTGAGCACAAGAT",5,5.53,8.53,-2.23,0.28,1.65,1.12,0.05,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","CGAGTGATTACAATAG",7,39.21,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S19Y G51E G83R",3
"lib1","SARS-CoV-2","CGAGTGCCCCTCTACT",3,41.77,8.26,-2.5,0.24,1.99,1.16,0.02,">1 nonsynonymous","I2N S41W S113N G174S",4
"lib1","SARS-CoV-2","CGAGTGGAACACAGCG",3,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M N92C T140Y T148R N151T",5
"lib1","SARS-CoV-2","CGAGTGGAATTCCACG",10,43.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9A A14T Y119M P133Y G174L",5
"lib1","SARS-CoV-2","CGAGTGGCAAAATCCT",3,57.47,10.16,-0.6,0.1,2.81,1.03,0,">1 nonsynonymous","E141L P169S",2
"lib1","SARS-CoV-2","CGAGTGGCACCCTGGG",1,3.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","CGAGTGTCAAATAATG",6,44.53,9.27,-1.5,0.23,1.5,1,0.03,">1 nonsynonymous","W23M K128L",2
"lib1","SARS-CoV-2","CGAGTGTCTCATGGAT",6,9.7,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","N13Y G101K R179M",3
"lib1","SARS-CoV-2","CGAGTGTGAGTTTATC",3,5.08,NA,NA,NA,NA,NA,NA,"stop","N130Y Y178*",2
"lib1","SARS-CoV-2","CGAGTTAAACGTGTAC",4,36.47,6.17,-4.6,0.58,1.5,1.18,0.02,">1 nonsynonymous","G86N F99V",2
"lib1","SARS-CoV-2","CGAGTTAAGACAAAAT",6,17.12,6,-4.76,1.82,1.5,1.17,0.02,">1 nonsynonymous","S45I L60F V103M S113R L188R",5
"lib1","SARS-CoV-2","CGAGTTAAGCCCTTAA",2,49.28,7.87,-2.89,0.4,1.5,1,0.08,">1 nonsynonymous","L5K S45I S108L Q144I Q168K",5
"lib1","SARS-CoV-2","CGAGTTAAGTCAATTT",7,78.38,6.04,-4.73,1.04,1.5,1.2,0.02,">1 nonsynonymous","V37F F99S Y119T",3
"lib1","SARS-CoV-2","CGAGTTATCAGCTACG",2,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101C T148L",2
"lib1","SARS-CoV-2","CGAGTTCAACCTACAA",4,46.99,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N92G K132A Y165L",3
"lib1","SARS-CoV-2","CGAGTTCACTAGGTCA",8,61.11,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","CGAGTTCCCATCAGCA",2,63.26,10.69,-0.08,0.05,2.89,1.03,0,">1 nonsynonymous","A22D T148Q",2
"lib1","SARS-CoV-2","CGAGTTCCTCGAATCC",3,103.94,6,-4.76,1.43,1.5,1.18,0.02,">1 nonsynonymous","N64D K94F Y119D G146N N151L",5
"lib1","SARS-CoV-2","CGAGTTCTGAACTATC",1,17.01,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","C6V V37M C61T A89G N118T K198M",6
"lib1","SARS-CoV-2","CGAGTTCTGAGCAGGT",1,5.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137K",1
"lib1","SARS-CoV-2","CGAGTTGCAAAAAATT",9,158.43,10.69,-0.07,0.06,2.87,1.09,0,"1 nonsynonymous","S139G",1
"lib1","SARS-CoV-2","CGAGTTTATCGAGACA",6,1.38,NA,NA,NA,NA,NA,NA,"stop","K94Y G116M S139*",3
"lib1","SARS-CoV-2","CGATAAAAACTAGTTA",2,23.52,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5T N40D I88Q C102R",4
"lib1","SARS-CoV-2","CGATAAAAGTTCTTTC",10,161.65,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G51M Y175I",2
"lib1","SARS-CoV-2","CGATAAACGACGAGAA",2,62.72,10.66,-0.1,0.08,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATAAACTGCAGAGT",2,1.45,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","CGATAAAGAAGCCGGT",1,2.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112H",1
"lib1","SARS-CoV-2","CGATAAAGAATTAACA",5,41,10.59,-0.17,0.06,2.89,1.06,0,">1 nonsynonymous","N58S F99W",2
"lib1","SARS-CoV-2","CGATAAAGACAGAAAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","CGATAAAGGTGATGTA",4,25.16,6,-4.76,1.67,3,1.2,0,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","CGATAAATCACAGCCT",2,18.6,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","V11N D68K Q84H",3
"lib1","SARS-CoV-2","CGATAAATCACTGCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","CGATAAATGATTTTCG",2,163.87,10.7,-0.06,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATAAATTACACTAA",3,14.6,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W106V S129R L162R",3
"lib1","SARS-CoV-2","CGATAAATTATTCCTT",13,77.81,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C31I F44V V103F F134H",4
"lib1","SARS-CoV-2","CGATAACAATGCAACA",10,75.81,6.11,-4.66,0.61,1.5,1.16,0.01,">1 nonsynonymous","F8W S45W G51L S69V G83M",5
"lib1","SARS-CoV-2","CGATAACAATTTTCGT",2,22.71,6.37,-4.39,1.13,1.5,1.29,0.07,">1 nonsynonymous","C49A N64M V153T",3
"lib1","SARS-CoV-2","CGATAACACAACCTCC",7,59.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P82S G117P",2
"lib1","SARS-CoV-2","CGATAACACAAGACGA",2,34.45,10.86,0.1,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATAACACCGAATCT",4,24.66,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","T15I K56V Y178N L183Y",4
"lib1","SARS-CoV-2","CGATAACAGGATCGCA",2,62.2,10.29,-0.47,0.07,2.85,1.02,0,">1 nonsynonymous","G9L R78T",2
"lib1","SARS-CoV-2","CGATAACAGGGAGAAA",4,17.25,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N109C F134D T140P",3
"lib1","SARS-CoV-2","CGATAACCTAGAACAC",7,120.06,10.79,0.02,0.06,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CGATAAGAACCAAGTC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","A18* L60K V103E",3
"lib1","SARS-CoV-2","CGATAAGACAATTTAA",5,23.24,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","F99D G196W",2
"lib1","SARS-CoV-2","CGATAAGACGGGGGCT",1,21.16,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","T63S T100P K128I",3
"lib1","SARS-CoV-2","CGATAAGTAAATCACC",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G D68V Y121T E135Y Q176L",5
"lib1","SARS-CoV-2","CGATAAGTAATATTAC",1,17.03,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V20M G74W G86W",3
"lib1","SARS-CoV-2","CGATAAGTAGGAATAT",3,58.89,9.22,-1.55,0.12,1.64,1.13,0.01,">1 nonsynonymous","D97T R127M T201R",3
"lib1","SARS-CoV-2","CGATAATAAGTAAATG",3,32.6,10.58,-0.18,0.05,2.92,1.02,0,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","CGATAATAATATGTGT",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D Y159P F185K",3
"lib1","SARS-CoV-2","CGATAATATAAACCCA",2,36.33,6,-4.76,1.04,2.34,1.16,0,">1 nonsynonymous","G83I L162N",2
"lib1","SARS-CoV-2","CGATAATATACGCTCC",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I C102L Y143W C158Y S164A",5
"lib1","SARS-CoV-2","CGATAATCAAAGAAAT",11,54.45,6.13,-4.64,0.86,1.5,1.25,0.03,">1 nonsynonymous","L95V N107W",2
"lib1","SARS-CoV-2","CGATAATGCTACACCC",11,2.45,NA,NA,NA,NA,NA,NA,"stop","L5E S41L K48Y L95G Q144*",5
"lib1","SARS-CoV-2","CGATAATGTCCGTTAC",1,15.57,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V77I V103L F156W",3
"lib1","SARS-CoV-2","CGATAATGTCCTGTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y Y123M C158S",3
"lib1","SARS-CoV-2","CGATAATGTCTGTTGA",1,27.31,6,-4.76,1.96,3,1.11,0,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","CGATAATTACCAAAGG",2,0.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132C",1
"lib1","SARS-CoV-2","CGATAATTATGTTCCT",2,23.01,10.41,-0.36,0.05,2.9,1.08,0,">1 nonsynonymous","C61I P149M",2
"lib1","SARS-CoV-2","CGATAATTATGTTTAA",8,23.01,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","G83F K87C D112G",3
"lib1","SARS-CoV-2","CGATAATTCATTTTAA",4,50.16,10.09,-0.68,0.05,2.63,1.03,0,">1 nonsynonymous","A33Y F44D W106T Y123S",4
"lib1","SARS-CoV-2","CGATACACACGATATA",3,21.99,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12C A81P G155L",3
"lib1","SARS-CoV-2","CGATACATAAGATATA",5,135.02,10.82,0.06,0.07,2.94,1,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","CGATACATCAGAATAG",1,14.88,8.26,-2.5,0.11,2.16,1.11,0,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","CGATACATGAATCTAA",1,6.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2W Y50V G116V",3
"lib1","SARS-CoV-2","CGATACCAACAGATAT",5,46.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T55S V103M C150N K198A",4
"lib1","SARS-CoV-2","CGATACCGAGTATACT",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L T148S",2
"lib1","SARS-CoV-2","CGATACCGTGAGTAAA",3,7.16,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","D59A G74R I142S V181R",4
"lib1","SARS-CoV-2","CGATACGAAACATGAT",6,60.5,10.24,-0.53,0.1,2.13,1.02,0,"1 nonsynonymous","E76G",1
"lib1","SARS-CoV-2","CGATACGAATACGAGG",3,30.25,9.15,-1.61,0.19,1.5,1.14,0.02,">1 nonsynonymous","L60D I88L",2
"lib1","SARS-CoV-2","CGATACGCCTGGCAGG",2,1.49,NA,NA,NA,NA,NA,NA,"stop","Y50* T55R Y123P",3
"lib1","SARS-CoV-2","CGATACTAGACCAGGA",5,24.29,6.45,-4.31,0.87,1.5,1.2,0.06,">1 nonsynonymous","K94L C102N N107P",3
"lib1","SARS-CoV-2","CGATACTGAGTTCAAT",3,32.28,6.47,-4.3,0.55,1.5,1.14,0.03,">1 nonsynonymous","P7N F17K K56M G83R N118F",5
"lib1","SARS-CoV-2","CGATACTGATAATACA",5,1.52,NA,NA,NA,NA,NA,NA,"stop","S139G C150* P161S",3
"lib1","SARS-CoV-2","CGATACTGATTTAGAA",2,2.15,NA,NA,NA,NA,NA,NA,"stop","E141A C158*",2
"lib1","SARS-CoV-2","CGATACTGTAGTTAGT",3,72.18,10.78,0.02,0.05,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CGATACTTAAGTTTCA",4,38.44,10.66,-0.11,0.06,2.93,1,0,"1 nonsynonymous","F134W",1
"lib1","SARS-CoV-2","CGATACTTATATTCCA",2,67.2,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2T A14W S45H Q84F N118V F134S P161Y V173S",8
"lib1","SARS-CoV-2","CGATACTTGTCCTCGA",1,13.02,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","S19V Y35F K87W F99S Y143S T148N",6
"lib1","SARS-CoV-2","CGATACTTTCAAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27C R124L D137S T148A L183T",5
"lib1","SARS-CoV-2","CGATAGAAAATAATTT",21,79.07,6,-4.76,1.78,1.5,1.29,0.03,">1 nonsynonymous","I2Y V103E P133H",3
"lib1","SARS-CoV-2","CGATAGAATATGTTAT",9,163.25,10.58,-0.18,0.02,2.87,1.05,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","CGATAGAATGCTCCTT",2,21.98,6,-4.76,2,1.5,1.25,0.04,"1 nonsynonymous","R124P",1
"lib1","SARS-CoV-2","CGATAGACCGCTTTTG",3,39.47,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P7I Y39P N58P D112L I138S P149T P161M",7
"lib1","SARS-CoV-2","CGATAGACTAAATAAG",4,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52M Y143Q",2
"lib1","SARS-CoV-2","CGATAGAGACAGACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74R P82W S139Q",3
"lib1","SARS-CoV-2","CGATAGAGTCCCATAG",3,42.04,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9E T100H N130K I138N S147Y Y165F L183S",7
"lib1","SARS-CoV-2","CGATAGAGTTGGACAC",2,45.41,8.52,-2.24,0.21,1.5,1.1,0.01,">1 nonsynonymous","A14L S43H Y91Q S129T",4
"lib1","SARS-CoV-2","CGATAGCAAAGCGGTG",5,1.22,NA,NA,NA,NA,NA,NA,"stop","S45* D68M T85C",3
"lib1","SARS-CoV-2","CGATAGCAGTAACGGA",2,47.21,10.75,-0.02,0.06,2.95,1.01,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","CGATAGCATTCCCTCT",9,138.48,10.82,0.06,0.08,2.82,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CGATAGCCCCTAAGCG",1,11.6,6,-4.76,2,3,1.02,0,">1 nonsynonymous","F99E K128I T201R",3
"lib1","SARS-CoV-2","CGATAGCGATAAAAAC",9,1.83,NA,NA,NA,NA,NA,NA,"stop","N1I W23* G116N",3
"lib1","SARS-CoV-2","CGATAGCGATAACAGT",1,26.52,8.42,-2.34,0.22,1.79,1.17,0.02,">1 nonsynonymous","R16F C61W P177S",3
"lib1","SARS-CoV-2","CGATAGCTAAACGTGC",7,137.4,10.77,0,0.07,2.94,1.02,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","CGATAGGCCATAGATT",2,15.58,6.2,-4.56,0.82,1.5,1.39,0.03,">1 nonsynonymous","F47N D98F",2
"lib1","SARS-CoV-2","CGATAGGGATTGGGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85S Y91* G172S",3
"lib1","SARS-CoV-2","CGATAGGTGAAATACC",3,12.37,8.94,-1.83,0.32,1.5,1,0.06,">1 nonsynonymous","Y91S K128D L162V",3
"lib1","SARS-CoV-2","CGATAGGTTAGAATAC",1,25.34,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W23L W106L L122V",3
"lib1","SARS-CoV-2","CGATAGGTTTACCACG",2,9.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A18F I88R Q144G",3
"lib1","SARS-CoV-2","CGATAGGTTTTAGTTT",12,54.35,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N92A F99D A105N P161F",4
"lib1","SARS-CoV-2","CGATAGTATGGAATCT",10,54.32,6,-4.76,1.33,1.5,1.18,0.02,">1 nonsynonymous","I28A F99I",2
"lib1","SARS-CoV-2","CGATAGTCTGTACTAT",4,1.55,NA,NA,NA,NA,NA,NA,"stop","R27V G101* Q144H Y159R F167N",5
"lib1","SARS-CoV-2","CGATATAAATGTTAAA",3,59.49,10.81,0.04,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATATAACAGATTGC",2,37.01,9.59,-1.17,0.13,2.05,1.06,0.01,">1 nonsynonymous","N107R S139K",2
"lib1","SARS-CoV-2","CGATATAAGCTAACTA",7,61.62,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","K56R I80D Y123A P197K",4
"lib1","SARS-CoV-2","CGATATACGATGCCTG",5,106.24,10.79,0.03,0.06,2.91,1.02,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","CGATATACTAAAACTG",5,77.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G51F G86A N107D R124L T201R",5
"lib1","SARS-CoV-2","CGATATACTGTCCCTG",1,44.79,8.44,-2.32,0.15,1.72,1.1,0.01,">1 nonsynonymous","F44T T55V I142N",3
"lib1","SARS-CoV-2","CGATATAGCTCGCAAC",1,9.39,8.64,-2.13,0.31,1.74,1.11,0.05,">1 nonsynonymous","V20S N120F",2
"lib1","SARS-CoV-2","CGATATAGGAGTCCAG",3,96.76,8.54,-2.23,0.13,2.28,1.12,0.01,">1 nonsynonymous","T15G S36Q N157S",3
"lib1","SARS-CoV-2","CGATATATGAAATGAT",1,15.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P7L D98M V103I K128P",4
"lib1","SARS-CoV-2","CGATATATTCAACAGA",1,10.5,10.77,0.01,0.21,2.88,1.05,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CGATATATTGCCTACA",2,51.21,10.38,-0.38,0.07,2.93,1,0,">1 nonsynonymous","A14M T55S T201V",3
"lib1","SARS-CoV-2","CGATATCCAACTATTC",10,161.44,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12L S41L F134R P149Q N157K",5
"lib1","SARS-CoV-2","CGATATCGAGAATTTT",1,12.66,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F12R A18R I80N N120Q",4
"lib1","SARS-CoV-2","CGATATGAGTAGCATG",6,21.33,9.99,-0.78,0.27,1.5,1,0.02,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","CGATATGATTTAATAT",1,11.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D59C P96Y N171F",3
"lib1","SARS-CoV-2","CGATATGCATTCCTAA",3,17.06,10.69,-0.07,0.07,2.87,1.07,0,"1 nonsynonymous","F44M",1
"lib1","SARS-CoV-2","CGATATGCTCAGTGAC",1,10.62,10.08,-0.68,0.15,2.94,1.09,0.01,"1 nonsynonymous","G155L",1
"lib1","SARS-CoV-2","CGATATTAAGTAGGCT",3,27.06,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D90H E135L Y165P",3
"lib1","SARS-CoV-2","CGATATTATCGGGCCT",4,0.39,NA,NA,NA,NA,NA,NA,"stop","T63V P82H G101L R127* G166T",5
"lib1","SARS-CoV-2","CGATATTTGGAAGCGG",3,1.63,NA,NA,NA,NA,NA,NA,"stop","T3L I104* N110K E186C",4
"lib1","SARS-CoV-2","CGATCAAAATCATCCT",9,4.08,NA,NA,NA,NA,NA,NA,"stop","A42V P82L K94C Y143S Q168*",5
"lib1","SARS-CoV-2","CGATCAAAGAACAGAT",2,38.9,8.33,-2.44,0.25,1.6,1.16,0.02,">1 nonsynonymous","C49V A81E K87M K198Q",4
"lib1","SARS-CoV-2","CGATCAAAGATCAAAC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","Y35S V52C L57Q G83Y V103* N107H I138N",7
"lib1","SARS-CoV-2","CGATCAAGACGAAATG",3,35.73,10.06,-0.7,0.12,2.53,1.03,0.01,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","CGATCAATATCAAACC",4,0,NA,NA,NA,NA,NA,NA,"stop","V11T G116* R136Y",3
"lib1","SARS-CoV-2","CGATCAATATCTTATG",7,4.84,NA,NA,NA,NA,NA,NA,"stop","S43A I80R C158* P177H S184V",5
"lib1","SARS-CoV-2","CGATCAATCAATCTGA",2,5.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S45F K94A G101A",3
"lib1","SARS-CoV-2","CGATCACAAAAATCTA",3,29.04,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","C61P I72H I80D P96T",4
"lib1","SARS-CoV-2","CGATCACAGAGTGTAT",3,15.12,6,-4.76,2,3,1.1,0.04,">1 nonsynonymous","F44V V71S G86F L183F",4
"lib1","SARS-CoV-2","CGATCACAGATTGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F62R Y119* K198W",3
"lib1","SARS-CoV-2","CGATCACAGCAAATCT",1,5.85,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S45V N151I C158M",3
"lib1","SARS-CoV-2","CGATCACCTCTAAAAA",5,22.57,6,-4.76,2,3,1.07,0,">1 nonsynonymous","G101I F134M",2
"lib1","SARS-CoV-2","CGATCACGTCAAAAAG",7,0.49,NA,NA,NA,NA,NA,NA,"stop","W23* R78L Q144L L162W",4
"lib1","SARS-CoV-2","CGATCACTCGTCGCAA",4,55.13,10.14,-0.63,0.06,2.91,1.02,0,">1 nonsynonymous","A14K L125A",2
"lib1","SARS-CoV-2","CGATCACTCGTTCTCG",3,21.44,8.65,-2.12,0.28,1.5,1.06,0.03,">1 nonsynonymous","C61H K87R A105K",3
"lib1","SARS-CoV-2","CGATCAGATTTATCGT",11,99.66,10.33,-0.44,0.06,2.88,1,0,"1 nonsynonymous","A14C",1
"lib1","SARS-CoV-2","CGATCAGCGAAAAGTG",2,22.64,9.93,-0.83,0.15,2.37,1.04,0.01,">1 nonsynonymous","P7L T15Y",2
"lib1","SARS-CoV-2","CGATCATAAACTAATC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","S19* R78L",2
"lib1","SARS-CoV-2","CGATCATAGATCACTT",3,84.73,10.77,0.01,0.05,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATCATAGCAATAAG",1,8.7,10.78,0.02,0.03,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATCATATAAGCTCC",5,42.92,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G9N W23R C61L V180S",4
"lib1","SARS-CoV-2","CGATCATCCATGCCAA",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F G155I",2
"lib1","SARS-CoV-2","CGATCATGAATCGGTC",6,1.12,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib1","SARS-CoV-2","CGATCATGTCCCAGAA",3,2.42,NA,NA,NA,NA,NA,NA,"stop","L5* K114L",2
"lib1","SARS-CoV-2","CGATCATTATCTTAAA",1,14.9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V77G D90N",2
"lib1","SARS-CoV-2","CGATCATTGCTGTCCC",5,0,NA,NA,NA,NA,NA,NA,"stop","G9L R25* Y91Q E141W",4
"lib1","SARS-CoV-2","CGATCCATATCCTATG",8,75.72,9.06,-1.71,0.18,1.5,1.09,0.01,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","CGATCCATATTTTCCA",5,54.83,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P133S Y143R Y159P S164R",4
"lib1","SARS-CoV-2","CGATCCATGCATGATG",2,12.66,10.67,-0.09,0.06,2.92,1,0,">1 nonsynonymous","V37Y D59L V153K",3
"lib1","SARS-CoV-2","CGATCCCATAATCGAG",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I A89R F160R",3
"lib1","SARS-CoV-2","CGATCCCATAATGAAA",3,24.05,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T46F K56T S113F Y119T",4
"lib1","SARS-CoV-2","CGATCCCCATAATCCA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38D Q84L F185Y",3
"lib1","SARS-CoV-2","CGATCCCGCTAGCCAT",3,20.75,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","W106F R124M K128D C150I",4
"lib1","SARS-CoV-2","CGATCCCGTGAATTGC",5,156.04,10.58,-0.19,0.03,2.93,1.01,0,">1 nonsynonymous","T3S N120H P149M",3
"lib1","SARS-CoV-2","CGATCCCTAATTAGAT",1,52.04,10.73,-0.03,0.09,2.9,1.05,0,"1 nonsynonymous","S184G",1
"lib1","SARS-CoV-2","CGATCCCTATACAAAC",12,160.41,9.89,-0.87,0.11,2.04,1.05,0,">1 nonsynonymous","A105I P149H",2
"lib1","SARS-CoV-2","CGATCCCTTCACGTTC",5,0.8,NA,NA,NA,NA,NA,NA,"stop","L38I R127*",2
"lib1","SARS-CoV-2","CGATCCGTTGCGAACG",12,179,10.82,0.06,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATCCTACAAATTCG",4,30.47,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I28D K114V N120V R127F P149G",5
"lib1","SARS-CoV-2","CGATCCTAGATTGAAT",3,8.6,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F70M A89W L125V P149I",4
"lib1","SARS-CoV-2","CGATCCTTAACTCTAA",1,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46W L125P N171F",3
"lib1","SARS-CoV-2","CGATCCTTACGAGTGA",1,20.14,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","F44D A105P L122A R127Q F167L",5
"lib1","SARS-CoV-2","CGATCGATCCGTATGG",7,52.08,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W106S R127V",2
"lib1","SARS-CoV-2","CGATCGCAATAATGAC",3,12.75,7.81,-2.96,0.43,1.51,1.31,0.04,">1 nonsynonymous","S41M Y91E",2
"lib1","SARS-CoV-2","CGATCGCAGAGGATCT",5,96.12,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S29K E135M Y143L Y165K Y175M",5
"lib1","SARS-CoV-2","CGATCGCTTATAACCT",19,371.36,8.21,-2.56,0.15,1.74,1.13,0.01,">1 nonsynonymous","K94R N157C",2
"lib1","SARS-CoV-2","CGATCGGTATGTTACG",1,15.51,10.91,0.15,0.1,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATCGTACAAGTACG",6,77.76,7.94,-2.82,0.29,1.5,1.14,0.03,">1 nonsynonymous","E10Q G51C S164L P197Q",4
"lib1","SARS-CoV-2","CGATCTAAACCTGAGA",2,26.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20W A105S V115I",3
"lib1","SARS-CoV-2","CGATCTAACAAATTCG",11,89.4,6,-4.76,1.13,1.5,1.19,0.01,">1 nonsynonymous","Y93C C195I",2
"lib1","SARS-CoV-2","CGATCTAAGCTCAATC",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V S113L L122E Q168G",4
"lib1","SARS-CoV-2","CGATCTACACGCCCCC",1,17.16,6.5,-4.27,0.35,1.5,1.1,0.02,">1 nonsynonymous","V20M L60K W106C F134R",4
"lib1","SARS-CoV-2","CGATCTACGGGGCCGT",6,36.21,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V37D A89T T100G N157T",4
"lib1","SARS-CoV-2","CGATCTATACGATGAG",11,44.17,6,-4.76,1.6,1.5,1.21,0.05,">1 nonsynonymous","F44N L95F T148D",3
"lib1","SARS-CoV-2","CGATCTATCATAAGGC",3,12.99,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T15H V103L N151P",3
"lib1","SARS-CoV-2","CGATCTATGTGCTGGT",10,52.82,9.9,-0.87,0.09,2.06,1.05,0,">1 nonsynonymous","S45A L60N D98V",3
"lib1","SARS-CoV-2","CGATCTATTAATAAAG",8,96.82,6,-4.76,1.49,1.5,1.13,0.01,">1 nonsynonymous","A89L G155C",2
"lib1","SARS-CoV-2","CGATCTATTTTTAGGA",4,15.33,6.32,-4.44,1.13,1.5,1.15,0.06,">1 nonsynonymous","V103E S113I",2
"lib1","SARS-CoV-2","CGATCTCACCAAGTGG",4,27.23,6,-4.76,2,3,1.24,0,">1 nonsynonymous","G101W F167L",2
"lib1","SARS-CoV-2","CGATCTCAGGTATTCG",7,63.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60P Y93Q P149T G174L",4
"lib1","SARS-CoV-2","CGATCTCATAGTCGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K I138W",2
"lib1","SARS-CoV-2","CGATCTCATGCCCAGT",5,52.78,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T46S P96H F99Y",3
"lib1","SARS-CoV-2","CGATCTCGGTAGGACT",4,95.73,9.94,-0.82,0.09,2.32,1.06,0,">1 nonsynonymous","E10L Y123C",2
"lib1","SARS-CoV-2","CGATCTCTAATGGACC",1,6.2,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","F8Y I88R D112V N118E",4
"lib1","SARS-CoV-2","CGATCTGATCTCACAC",4,107.04,10.24,-0.52,0.04,2.84,1.02,0,">1 nonsynonymous","N107G T201N",2
"lib1","SARS-CoV-2","CGATCTGTATAAAAAT",5,108.05,10.69,-0.08,0.03,2.91,1,0,">1 nonsynonymous","K26M E154N",2
"lib1","SARS-CoV-2","CGATCTTACCACAGGC",2,17.33,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G86Y I138A Y159L",3
"lib1","SARS-CoV-2","CGATGAAAACCCAGCC",3,15.87,10.75,-0.01,0.07,2.98,1,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","CGATGAAACAACCATG",10,58.96,6,-4.76,2,2.62,1.28,0.02,">1 nonsynonymous","I72P D98E W106M F134C",4
"lib1","SARS-CoV-2","CGATGAAAGAGACCAT",4,65.85,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S43F G83H Y93P Y175D S200V",5
"lib1","SARS-CoV-2","CGATGAACATGAGGAT",6,76.37,8.5,-2.26,0.16,1.67,1.18,0.01,">1 nonsynonymous","C6K R136L",2
"lib1","SARS-CoV-2","CGATGAACCAATCAAG",1,36.95,10.82,0.05,0.07,2.9,1.02,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","CGATGAACCACAAAAC",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43G F62S V103R Q163R",4
"lib1","SARS-CoV-2","CGATGAAGAAAATTAA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D F156L",2
"lib1","SARS-CoV-2","CGATGAATAACTTACA",1,13.01,7.44,-3.32,0.31,1.5,1.07,0.03,">1 nonsynonymous","P82Q D97L",2
"lib1","SARS-CoV-2","CGATGAATAATCCGGT",7,82.45,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","F99G",1
"lib1","SARS-CoV-2","CGATGAATAGATTAAG",7,5.44,NA,NA,NA,NA,NA,NA,"stop","D59* Y143K C150S A192S T201Y",5
"lib1","SARS-CoV-2","CGATGACAGGATCTAG",14,227.88,10.7,-0.07,0.05,2.91,1.06,0,">1 nonsynonymous","K56A F160D",2
"lib1","SARS-CoV-2","CGATGACATATTTAAT",1,27.99,10.27,-0.49,0.08,2.86,1.05,0,">1 nonsynonymous","F8W F44I D59G",3
"lib1","SARS-CoV-2","CGATGACATCTAGTCG",4,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73D N107S",2
"lib1","SARS-CoV-2","CGATGACCATAAGTTA",1,12.66,6,-4.76,2,2.25,1.14,0,">1 nonsynonymous","L60H Y159S",2
"lib1","SARS-CoV-2","CGATGACCCAGGGTGA",4,44.03,10.69,-0.07,0.08,2.88,1.08,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","CGATGACTAGAATATG",1,58.53,10.71,-0.06,0.06,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CGATGACTGTACCAAG",1,85,7.4,-3.37,0.45,1.5,1.06,0.07,">1 nonsynonymous","S45C E154M P177S",3
"lib1","SARS-CoV-2","CGATGACTTGATTATA",4,0.65,NA,NA,NA,NA,NA,NA,"stop","S139* N171T",2
"lib1","SARS-CoV-2","CGATGAGCCCCATTAA",3,61.82,9.89,-0.88,0.05,2.89,1.04,0,"1 nonsynonymous","N171G",1
"lib1","SARS-CoV-2","CGATGAGCTAACCCAA",2,9.82,6.05,-4.71,2,3,1.14,0.01,">1 nonsynonymous","K56T L95G N107H V173L",4
"lib1","SARS-CoV-2","CGATGAGGGAACTCAT",6,80.95,6.05,-4.71,0.64,1.5,1.15,0.01,">1 nonsynonymous","F99Y N107F Y119H",3
"lib1","SARS-CoV-2","CGATGAGTACCCAATT",11,94.44,9.81,-0.95,0.04,2.84,1.01,0,">1 nonsynonymous","N107R K114L P197S",3
"lib1","SARS-CoV-2","CGATGAGTTATGTTCT",1,56.82,10.73,-0.03,0.09,2.89,1.06,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","CGATGATAAACCGGGC",3,0.06,NA,NA,NA,NA,NA,NA,"stop","V103* S139W",2
"lib1","SARS-CoV-2","CGATGATAAATCACGG",2,69.39,10.67,-0.09,0.07,2.91,1.07,0,"1 nonsynonymous","G116P",1
"lib1","SARS-CoV-2","CGATGATGACAATACT",1,16.75,10.32,-0.44,0.11,2.78,1.03,0.01,">1 nonsynonymous","K128S R136I",2
"lib1","SARS-CoV-2","CGATGATTGGAATTAA",7,80.99,10.8,0.04,0.07,2.92,1.05,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","CGATGCAAAACTACTT",4,106.96,10.53,-0.23,0.05,2.88,1.05,0,">1 nonsynonymous","D59V T201L",2
"lib1","SARS-CoV-2","CGATGCAAATCGAAAC",3,35.68,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S43R T55M D75T C102L K114T K128F G152H",7
"lib1","SARS-CoV-2","CGATGCAAATTACGAC",19,273.28,10.61,-0.16,0.03,2.92,1.05,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","CGATGCACCCATCCAC",3,24.36,10.05,-0.71,0.11,1.88,1.12,0,">1 nonsynonymous","E10G P54V A81S Y91L",4
"lib1","SARS-CoV-2","CGATGCCAATTTAGAA",6,79.63,6,-4.76,1.91,1.5,1.14,0.01,">1 nonsynonymous","N151L N157V Y175E T201A",4
"lib1","SARS-CoV-2","CGATGCCATTAAGAGA",4,9.64,6.18,-4.58,1.22,1.5,1.16,0.05,">1 nonsynonymous","L57K D90E V103D V173E",4
"lib1","SARS-CoV-2","CGATGCCTTACAATCA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F44* G51V G74M N92I E186T",5
"lib1","SARS-CoV-2","CGATGCCTTCTTGAAC",1,1.48,NA,NA,NA,NA,NA,NA,"stop","K26L T55K P82S N92* G116P",5
"lib1","SARS-CoV-2","CGATGCGAAAAACAGG",2,6.26,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","G86V F99V",2
"lib1","SARS-CoV-2","CGATGCGAATAAAGTT",5,6.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15Q C49S",2
"lib1","SARS-CoV-2","CGATGCGTAGACGTAG",4,37.97,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Y50S R73P W106S F126T",4
"lib1","SARS-CoV-2","CGATGCTAAACTATAG",10,73.18,6,-4.76,1.15,1.5,1.18,0.01,">1 nonsynonymous","R25F E135R",2
"lib1","SARS-CoV-2","CGATGCTAATTACCTG",2,51.25,6,-4.76,1.34,1.5,1.16,0.02,">1 nonsynonymous","A89S Y178G",2
"lib1","SARS-CoV-2","CGATGCTAGAGATGTT",1,5.62,NA,NA,NA,NA,NA,0.39,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","CGATGCTAGTGAGATA",8,114.44,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R16L Q144S Y165C G174H H189S",5
"lib1","SARS-CoV-2","CGATGCTCAATGCCCG",4,78.79,9.03,-1.74,0.1,2.24,1.17,0,">1 nonsynonymous","A14V K128V F156M K198V",4
"lib1","SARS-CoV-2","CGATGCTTGTCATAAA",3,27.37,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S69L K94Y V103L G146T",4
"lib1","SARS-CoV-2","CGATGGAAAAAAACAA",4,42.42,10.53,-0.23,0.06,2.94,1.03,0,">1 nonsynonymous","T46L I138S",2
"lib1","SARS-CoV-2","CGATGGACAGATATGC",5,56.44,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N4F Y143N E154C",3
"lib1","SARS-CoV-2","CGATGGAGATGCCCGG",2,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I G101D I142Y P149S N157T P169L",6
"lib1","SARS-CoV-2","CGATGGATTGGACCAT",1,14.22,9.92,-0.84,0.16,2.41,1.13,0.01,">1 nonsynonymous","V11A T201L",2
"lib1","SARS-CoV-2","CGATGGCAAAATGCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T L57F T140N",3
"lib1","SARS-CoV-2","CGATGGCTATAGACAA",9,112.03,9.3,-1.46,0.09,2,1.13,0,">1 nonsynonymous","D59V K87R R136A S200H",4
"lib1","SARS-CoV-2","CGATGGGTCGACTTAG",1,15.37,10.78,0.02,0.06,2.91,1.06,0,">1 nonsynonymous","N64V P149T",2
"lib1","SARS-CoV-2","CGATGTAACAATAAAC",1,27.22,8.63,-2.14,0.15,2.69,1,0.01,">1 nonsynonymous","C61R D112E G166R",3
"lib1","SARS-CoV-2","CGATGTACAAGAATCT",1,24.18,6.09,-4.68,1.31,1.5,1.19,0.04,">1 nonsynonymous","N13Y V52I V173T",3
"lib1","SARS-CoV-2","CGATGTACTACAAGGA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V W106C V182I",3
"lib1","SARS-CoV-2","CGATGTATTCTACAAT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","C6K S19* T63S V103Y G117* R127K F156Y",7
"lib1","SARS-CoV-2","CGATGTCACAGACAAC",3,71.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A18S R27W T63S N92I N157P",5
"lib1","SARS-CoV-2","CGATGTCGACAGAGAT",5,14.63,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","V37Y G51V T63H D90P D112W",5
"lib1","SARS-CoV-2","CGATGTCTAAATTAAT",3,12.8,10.63,-0.14,0.14,2.89,1.05,0.01,">1 nonsynonymous","P54C P149A",2
"lib1","SARS-CoV-2","CGATGTCTGGAATGTC",1,52.03,10.64,-0.13,0.08,2.92,1.04,0,">1 nonsynonymous","E10M F160R T201L",3
"lib1","SARS-CoV-2","CGATGTCTTACCCTAC",2,34.65,6,-4.76,1.21,1.8,1.12,0,">1 nonsynonymous","T3I T15S R27Q L60Q D112N L122G",6
"lib1","SARS-CoV-2","CGATGTGACGTTCAAG",5,35.77,7.98,-2.78,0.28,1.5,1.12,0.03,">1 nonsynonymous","P7N G51F V181L",3
"lib1","SARS-CoV-2","CGATGTGAGATTGTTA",2,12.67,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77M I88H F99K",3
"lib1","SARS-CoV-2","CGATGTGATACCGACA",6,36.12,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D90C R124N",2
"lib1","SARS-CoV-2","CGATGTGTCACAACGG",3,22.66,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","L38S L57M A89Y L122S",4
"lib1","SARS-CoV-2","CGATGTTATAGATAAC",19,217.49,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F47S Q176K",2
"lib1","SARS-CoV-2","CGATGTTCATTACCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31V V37Q D59*",3
"lib1","SARS-CoV-2","CGATGTTCTATGGGAG",1,8.4,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y21P V103L E141T",3
"lib1","SARS-CoV-2","CGATGTTGCAGATTGA",7,115.67,10.77,0,0.06,2.91,1.06,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","CGATGTTTACACACGG",4,27.43,9.62,-1.14,0.35,1.5,1.08,0.05,">1 nonsynonymous","F44S D90P E141P",3
"lib1","SARS-CoV-2","CGATGTTTTTCCAAAC",1,24.09,6.26,-4.51,0.79,1.5,1.15,0.03,">1 nonsynonymous","C49G G86V T170R",3
"lib1","SARS-CoV-2","CGATTAAAGAGCTTAA",1,89.43,8.38,-2.39,0.15,2.4,1.06,0.01,">1 nonsynonymous","L5E Q176D",2
"lib1","SARS-CoV-2","CGATTAAATCCTTACC",6,84.48,10.68,-0.08,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATTAACTTTATGAT",11,146.18,10.36,-0.4,0.05,2.9,1.05,0,"1 nonsynonymous","G174M",1
"lib1","SARS-CoV-2","CGATTAAGCACTTAAT",14,3.05,NA,NA,NA,NA,NA,NA,"stop","G9* T63I Y91V S200E",4
"lib1","SARS-CoV-2","CGATTAAGGCACTGAG",1,6.21,6.04,-4.72,0.97,2.65,1.2,0.02,">1 nonsynonymous","E10I V103I Y119L S147I",4
"lib1","SARS-CoV-2","CGATTAAGTTCATATG",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E F47Y G83N N107V T140Y G172C",6
"lib1","SARS-CoV-2","CGATTAATATAAGTAT",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R T85A G101S",3
"lib1","SARS-CoV-2","CGATTAATCCCTTCCA",1,6.05,9.03,-1.74,0.33,1.65,1.04,0.05,">1 nonsynonymous","P96R N107V",2
"lib1","SARS-CoV-2","CGATTAATCTAAAAGT",7,72.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38E L131R G166F Y178S",4
"lib1","SARS-CoV-2","CGATTAATGAAATTCG",1,27.51,10.67,-0.1,0.05,2.93,1.06,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","CGATTAATTACATTCC",7,8.82,6,-4.76,2,3,1.31,0.03,">1 nonsynonymous","I104R D112R",2
"lib1","SARS-CoV-2","CGATTAATTTCCTAGC",4,97.67,10.18,-0.58,0.07,2.73,1,0,">1 nonsynonymous","S36L D59L P149R S200A",4
"lib1","SARS-CoV-2","CGATTACATATACATA",2,29.78,9.87,-0.89,0.14,2.84,1,0.01,">1 nonsynonymous","G146F K198G",2
"lib1","SARS-CoV-2","CGATTACCAAAAAAAA",5,5.55,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","A33D V65T I104E V173I",4
"lib1","SARS-CoV-2","CGATTACCAAAATAAG",4,263.74,8.45,-2.31,0.12,2.23,1.1,0.01,">1 nonsynonymous","N107A Q176H",2
"lib1","SARS-CoV-2","CGATTACTCAAGAAAC",5,47.45,10.3,-0.46,0.05,2.92,1.04,0,">1 nonsynonymous","N1G F44L T55H Q163S",4
"lib1","SARS-CoV-2","CGATTAGAACAAATAT",1,21.05,10.67,-0.1,0.13,2.83,1.03,0.01,"1 nonsynonymous","K128I",1
"lib1","SARS-CoV-2","CGATTAGATGACTTGG",8,85.09,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V37I I72R P133C",3
"lib1","SARS-CoV-2","CGATTATAACAAGTTT",2,21.05,10.7,-0.06,0.04,2.94,1.01,0,">1 nonsynonymous","C61M T85K",2
"lib1","SARS-CoV-2","CGATTATAAGCCCTAA",14,185.15,10.78,0.02,0.06,2.86,1.08,0,">1 nonsynonymous","T3E G9E",2
"lib1","SARS-CoV-2","CGATTATAATACAGTA",1,35.87,6,-4.76,1.89,1.5,1.15,0.01,">1 nonsynonymous","F17G N107V I138V",3
"lib1","SARS-CoV-2","CGATTATAATTATCGC",3,85.28,10.05,-0.71,0.08,2.67,1.05,0,">1 nonsynonymous","P149R F156S Y178F",3
"lib1","SARS-CoV-2","CGATTATATAAGTAAT",4,28.68,6.22,-4.54,0.9,1.5,1.24,0.03,">1 nonsynonymous","D59A T85Q D90G S113F",4
"lib1","SARS-CoV-2","CGATTATATAATCTCA",8,26.9,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T55D L60I L95R E141L N151L",5
"lib1","SARS-CoV-2","CGATTATATCAAATAC",10,97.49,10.38,-0.38,0.04,2.91,1.03,0,">1 nonsynonymous","S36Q F62Q",2
"lib1","SARS-CoV-2","CGATTATCATTCCAGT",3,38.91,10.77,0,0.07,2.92,1.03,0,"1 nonsynonymous","I138C",1
"lib1","SARS-CoV-2","CGATTATCTAAGCGCA",6,0.4,NA,NA,NA,NA,NA,NA,"stop","I2S C61V Y91N Q176*",4
"lib1","SARS-CoV-2","CGATTATTATACATAT",7,92.19,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R27K V37F C49Y A105M I142E",5
"lib1","SARS-CoV-2","CGATTATTGCGCCTGA",1,18.33,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","S41P A67V G172L S184E",4
"lib1","SARS-CoV-2","CGATTATTGGGCAGTA",8,100.65,10.8,0.04,0.07,2.84,1.05,0,"1 nonsynonymous","N130E",1
"lib1","SARS-CoV-2","CGATTATTGTAGACCA",6,23.48,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14G S19W Q79S",3
"lib1","SARS-CoV-2","CGATTATTTATACTCA",3,23.18,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A81V K87S E135L G146L G166C",5
"lib1","SARS-CoV-2","CGATTATTTGACAAAA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S I104S L111Y Y119V",4
"lib1","SARS-CoV-2","CGATTATTTTACAACT",11,258.18,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14M F47L G146E F156E",4
"lib1","SARS-CoV-2","CGATTCAACCTAATAC",2,49.12,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D112M Y123S N130Y G174S",4
"lib1","SARS-CoV-2","CGATTCAAGTGGGAAT",18,402.32,10.64,-0.12,0.03,2.86,1.07,0,">1 nonsynonymous","N1E L5P D97N N120S T148Y",5
"lib1","SARS-CoV-2","CGATTCAGCCCAAACG",2,12.95,9.49,-1.27,0.35,1.5,1,0.07,">1 nonsynonymous","A14S A81R A89I",3
"lib1","SARS-CoV-2","CGATTCAGGTGTTGAG",2,50.96,10.08,-0.68,0.08,2.79,1,0,">1 nonsynonymous","S45M G155S",2
"lib1","SARS-CoV-2","CGATTCAGTTGAGGTA",6,38.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G N92L F99L E141L",4
"lib1","SARS-CoV-2","CGATTCCAGAGAATAA",3,95.1,6.01,-4.76,1.32,1.5,1.32,0.03,">1 nonsynonymous","E10I V103Y G166Y T170K S200I",5
"lib1","SARS-CoV-2","CGATTCCCTGCGTATC",2,10.76,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","L38T F99L F126R",3
"lib1","SARS-CoV-2","CGATTCCGTAATCAAA",7,52.72,7.19,-3.57,0.35,1.5,1.11,0.03,">1 nonsynonymous","A42V K128F F167L",3
"lib1","SARS-CoV-2","CGATTCCTTACAGACC",5,33.89,10.96,0.19,0.06,2.98,1,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","CGATTCGCGTGGCTGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43N",1
"lib1","SARS-CoV-2","CGATTCGGATGTGATA",4,126.21,10.83,0.07,0.11,2.86,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CGATTCGGTGATAGTA",2,11.94,NA,NA,NA,NA,NA,NA,"stop","G9R N13* N109K G146E",4
"lib1","SARS-CoV-2","CGATTCTGACCCCGCG",1,7.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G S41D K87S P96L",4
"lib1","SARS-CoV-2","CGATTGAAATCATAAA",3,31.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V11S P54M V77N Q84G G101N",5
"lib1","SARS-CoV-2","CGATTGAATATGTTGT",1,20.04,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6I V37K Q79N P149R",4
"lib1","SARS-CoV-2","CGATTGACAATGGTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N30S F44* P82N N92S N118Q",5
"lib1","SARS-CoV-2","CGATTGACACAGTCTA",7,37.41,8.63,-2.13,0.19,1.57,1.21,0.01,">1 nonsynonymous","P96L N120K",2
"lib1","SARS-CoV-2","CGATTGACCCTAAATA",1,19.73,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A105R N118I T140N G166Q",4
"lib1","SARS-CoV-2","CGATTGAGCTCCCATA",2,5.52,6.76,-4,0.58,1.5,1.06,0.01,">1 nonsynonymous","G117L G155I",2
"lib1","SARS-CoV-2","CGATTGCACGCTTTAT",1,10.92,9.68,-1.08,0.1,2.96,1,0,"1 nonsynonymous","L125P",1
"lib1","SARS-CoV-2","CGATTGCCAATAACCT",12,120.69,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","G86S N107G R136Q",3
"lib1","SARS-CoV-2","CGATTGCCGAACAACG",6,25.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T15S Y50E G86D D90Y G155L",5
"lib1","SARS-CoV-2","CGATTGCGCAAATGCC",1,38.85,10.56,-0.2,0.09,2.87,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CGATTGGGTTCCACAC",4,23.43,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K26L D59V L95G",3
"lib1","SARS-CoV-2","CGATTGGTTGACCAAC",6,235.44,8.73,-2.03,0.1,2.89,1.1,0,"1 nonsynonymous","Y159L",1
"lib1","SARS-CoV-2","CGATTGTAGATGTTCT",3,38.3,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","N4V A14L V37R C102V I142C",5
"lib1","SARS-CoV-2","CGATTTAAACAGCCGG",9,51.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F44S V103G D112V",3
"lib1","SARS-CoV-2","CGATTTAAATAAAGCA",1,34.63,9.87,-0.9,0.08,2.6,1.05,0,">1 nonsynonymous","C6Q I104L",2
"lib1","SARS-CoV-2","CGATTTAATCGGCAAA",1,25.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N4I G116L Y159T",3
"lib1","SARS-CoV-2","CGATTTACACAAGTAT",4,8.96,6.64,-4.13,0.46,1.5,1.06,0.05,">1 nonsynonymous","F17K F62V G83F Y91G N107E",5
"lib1","SARS-CoV-2","CGATTTACAGTCCGTT",7,39.95,10.81,0.05,0.07,2.89,1.03,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","CGATTTACTAAAAAAA",2,30.22,10.53,-0.24,0.07,2.94,1.01,0,">1 nonsynonymous","D34C L122Y T148R",3
"lib1","SARS-CoV-2","CGATTTAGCATAGAAG",2,37.28,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","L57S L111T P161G",3
"lib1","SARS-CoV-2","CGATTTATCTTAAGTA",4,6.11,7.11,-3.66,0.66,1.5,1.12,0.05,">1 nonsynonymous","T85L Y123N G155C",3
"lib1","SARS-CoV-2","CGATTTCAAACGGGAG",3,61.8,8.45,-2.32,0.14,1.59,1.16,0.01,">1 nonsynonymous","N40L C61G G83L D90Q I138A",5
"lib1","SARS-CoV-2","CGATTTCAATAGAATC",2,0.58,NA,NA,NA,NA,NA,NA,"stop","K94S P149* S184G",3
"lib1","SARS-CoV-2","CGATTTCACAGGGAAA",2,69.37,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V32T N40E C61M S113I I142T T201R",6
"lib1","SARS-CoV-2","CGATTTCAGCCCAAAA",1,22.29,8.8,-1.96,0.13,2.67,1.19,0.01,">1 nonsynonymous","A81G Y119L",2
"lib1","SARS-CoV-2","CGATTTCATTTGTTTT",4,8.99,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L57H F167E",2
"lib1","SARS-CoV-2","CGATTTCCAAGAAATA",1,6.98,10.99,0.23,0.2,2.99,1,0,">1 nonsynonymous","N4K T85V",2
"lib1","SARS-CoV-2","CGATTTCCTAGATTTT",3,31.84,8.65,-2.12,0.19,1.67,1.16,0.01,"1 nonsynonymous","G86Q",1
"lib1","SARS-CoV-2","CGATTTCGGTATCCAT",5,57.33,6.94,-3.83,0.3,1.5,1.17,0.02,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","CGATTTCGTCAAACCT",2,34.7,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F44R F99M G174W P177T",4
"lib1","SARS-CoV-2","CGATTTCTTCTATATG",3,44.89,9.96,-0.8,0.09,2.66,1.02,0,">1 nonsynonymous","V11Y V37Y L60H",3
"lib1","SARS-CoV-2","CGATTTCTTTAGTTGT",1,55.8,7.68,-3.09,0.38,1.5,1.09,0.05,">1 nonsynonymous","T3S G117K L162T",3
"lib1","SARS-CoV-2","CGATTTGAACTTGTTG",5,79.75,6.48,-4.28,0.52,1.5,1.3,0.03,">1 nonsynonymous","Y50R T55P",2
"lib1","SARS-CoV-2","CGATTTGAATACATAC",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K P82F",2
"lib1","SARS-CoV-2","CGATTTGCATGTCCTT",5,10.15,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N107Y E141S",2
"lib1","SARS-CoV-2","CGATTTGCCCCCCAGC",4,24.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A22V C31L Y93T",3
"lib1","SARS-CoV-2","CGATTTGCGGATGAGA",7,181.91,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F12G F156K Y178R K198A",4
"lib1","SARS-CoV-2","CGATTTGTACATCCAT",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A K26L C49H L95A L122P S129Y T140S",7
"lib1","SARS-CoV-2","CGATTTTAAATAATTA",2,29.55,6.1,-4.66,0.54,1.5,1.14,0.01,">1 nonsynonymous","Y35I Y39W T46F G117V F167I Y178I",6
"lib1","SARS-CoV-2","CGATTTTGAGTCAAAA",11,214.1,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I2S F12C V20L S36F Y91V F99I",6
"lib1","SARS-CoV-2","CGATTTTGTCCTTGAG",2,0.57,NA,NA,NA,NA,NA,NA,"stop","K26* P149N F160L",3
"lib1","SARS-CoV-2","CGATTTTTAAAGTACG",5,58.99,9.89,-0.88,0.12,2.22,1.07,0.01,">1 nonsynonymous","A42S V52H T55N E135A K198M",5
"lib1","SARS-CoV-2","CGCAAAAAAAAACAAT",2,23.89,9.92,-0.84,0.1,2.15,1.04,0,">1 nonsynonymous","G9A V37A K94L",3
"lib1","SARS-CoV-2","CGCAAAAACGGACAGC",1,36.09,9.9,-0.87,0.06,2.64,1.05,0,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","CGCAAAAACTAATATG",1,9.3,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V32W G86S S139A G152L",4
"lib1","SARS-CoV-2","CGCAAAACATAGATGA",3,50.78,9.51,-1.26,0.16,1.65,1.1,0.01,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","CGCAAAAGGATTCACA",1,35.97,6,-4.76,0.84,1.5,1.16,0.01,">1 nonsynonymous","A14D D59Y S113I",3
"lib1","SARS-CoV-2","CGCAAAATAAATAGGG",1,21.41,8.41,-2.35,0.23,1.5,1.14,0.02,">1 nonsynonymous","E10N K48A Y121K",3
"lib1","SARS-CoV-2","CGCAAAATAGACAACA",1,9.27,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","G152S V182F K198S",3
"lib1","SARS-CoV-2","CGCAAAATGAATTGCT",10,214.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G146A C150Y S164V",3
"lib1","SARS-CoV-2","CGCAAACAAAGCAGGC",2,2.58,NA,NA,NA,NA,NA,NA,"stop","A14N S29Q V37L F47* V52L G155L Y175R",7
"lib1","SARS-CoV-2","CGCAAACAAATCGCCA",5,213.18,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24L Y119Q G172N",3
"lib1","SARS-CoV-2","CGCAAACAAGACCCAC",2,9.79,9.81,-0.95,0.24,2.15,1.02,0.02,">1 nonsynonymous","A42I Y91K F160D",3
"lib1","SARS-CoV-2","CGCAAACAATACAGGG",3,34.19,6.2,-4.57,0.85,1.5,1.21,0.04,">1 nonsynonymous","F8N N40S D90K T100L",4
"lib1","SARS-CoV-2","CGCAAACATTAGAGTT",9,56.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49S E154S P177R",3
"lib1","SARS-CoV-2","CGCAAACCCAAATAAA",3,29.56,6.48,-4.28,0.53,1.5,1.21,0.02,">1 nonsynonymous","R16P Y35H N58C L95P A145P Y178F",6
"lib1","SARS-CoV-2","CGCAAACCTATAAACC",6,91.09,10.54,-0.22,0.05,2.9,1.02,0,">1 nonsynonymous","S43E K87A",2
"lib1","SARS-CoV-2","CGCAAACGACCCAACC",11,147.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N30R S45N T100F G117T K128T G146D G155S",7
"lib1","SARS-CoV-2","CGCAAACGAGAATACA",4,48.84,9.97,-0.79,0.08,2.3,1,0,">1 nonsynonymous","G51H D98L",2
"lib1","SARS-CoV-2","CGCAAACGTAAGTTCA",7,50.95,6,-4.76,2,1.5,1.12,0,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","CGCAAACTAAAACCAG",4,15.01,10.65,-0.11,0.13,2.9,1.04,0.01,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","CGCAAACTGAAACACA",2,14.4,8.5,-2.27,0.23,2.02,1.19,0.02,">1 nonsynonymous","A14E S41A S108T Q144A T170H",5
"lib1","SARS-CoV-2","CGCAAACTGTAGGAAA",13,77.98,10.62,-0.15,0.09,2.81,1.15,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","CGCAAAGAAGCTACTA",3,66.67,8.69,-2.07,0.21,1.58,1.11,0.01,">1 nonsynonymous","V37M F62D A105S Y121I",4
"lib1","SARS-CoV-2","CGCAAAGACTATGCAG",9,71.77,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","R25K V52D",2
"lib1","SARS-CoV-2","CGCAAAGAGCTATATG",2,24.89,10.34,-0.43,0.09,2.75,1.05,0,">1 nonsynonymous","E10S G116A",2
"lib1","SARS-CoV-2","CGCAAAGATAACGACA",1,8.65,10.53,-0.23,0.09,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCAAAGTGCAATCCC",5,47.21,6.37,-4.39,0.56,1.5,1.13,0.02,">1 nonsynonymous","K87H F99D",2
"lib1","SARS-CoV-2","CGCAAATAAAAGCGAT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","T15* N58S V180S",3
"lib1","SARS-CoV-2","CGCAAATAATAACAAG",2,60.61,10.76,-0.01,0.11,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCAAATGATGACAGC",6,87.29,10.1,-0.67,0.04,2.87,1.08,0,">1 nonsynonymous","K56H F156M",2
"lib1","SARS-CoV-2","CGCAAATGTTATGCAA",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F P96M T148V N171G",4
"lib1","SARS-CoV-2","CGCAACAAAAACCATA",1,22.71,6,-4.76,1.24,1.5,1.19,0.03,">1 nonsynonymous","N30V G83T N107R",3
"lib1","SARS-CoV-2","CGCAACAAAAAGTGGA",3,35.07,9.27,-1.49,0.16,1.71,1.13,0.01,">1 nonsynonymous","K56N L162K",2
"lib1","SARS-CoV-2","CGCAACAACGGTATTT",8,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K F17K",2
"lib1","SARS-CoV-2","CGCAACACAAAATTGA",2,31.12,9.83,-0.94,0.09,2.5,1.03,0,">1 nonsynonymous","K94H G116N P149F",3
"lib1","SARS-CoV-2","CGCAACACTAATAACA",5,13.28,10.26,-0.5,0.07,2.93,1.07,0,">1 nonsynonymous","I2L N151S F156R S200Q",4
"lib1","SARS-CoV-2","CGCAACACTAGCCGAC",6,76.59,6.55,-4.21,0.25,1.5,1.08,0.01,">1 nonsynonymous","S36K C49A Y123I",3
"lib1","SARS-CoV-2","CGCAACATACAAACGT",11,140.61,6.07,-4.69,0.73,1.5,1.19,0.01,">1 nonsynonymous","C61N R136A I142N",3
"lib1","SARS-CoV-2","CGCAACATCAACACGT",8,121.36,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","Y159G T170H",2
"lib1","SARS-CoV-2","CGCAACCAGTTAGCTA",1,25.31,9.57,-1.2,0.19,1.79,1.08,0.02,">1 nonsynonymous","K87W E135W",2
"lib1","SARS-CoV-2","CGCAACCATCTCATCA",3,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S T100G G116A Y121M",4
"lib1","SARS-CoV-2","CGCAACCATGCAGAAA",7,86.25,10.84,0.08,0.06,2.89,1.05,0,"1 nonsynonymous","I104W",1
"lib1","SARS-CoV-2","CGCAACCCATAAGTAG",4,76.79,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L60P R127H E154Y",3
"lib1","SARS-CoV-2","CGCAACCTAAACGCCG",3,16.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L60F V77M Y119G E141F Y165C H189D",6
"lib1","SARS-CoV-2","CGCAACGCCTGAGCCG",3,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120M S139T",2
"lib1","SARS-CoV-2","CGCAACGCTCCGACCC",5,8.65,6,-4.76,2,1.5,1.27,0.05,"1 nonsynonymous","V103K",1
"lib1","SARS-CoV-2","CGCAACGGAATAAAGC",2,16.46,10,-0.77,0.23,2.41,1.07,0.02,">1 nonsynonymous","G83I T140Q V153A",3
"lib1","SARS-CoV-2","CGCAACGGTCGAATTA",2,8.23,10.02,-0.74,0.23,1.78,1.05,0.02,"1 nonsynonymous","V77S",1
"lib1","SARS-CoV-2","CGCAACGTCTATAAAC",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D F44V A67H E135M F156S V173M",6
"lib1","SARS-CoV-2","CGCAACTAAACCTTGT",3,25.4,8.04,-2.72,0.17,1.99,1.01,0.01,">1 nonsynonymous","G117C Y165W P197L",3
"lib1","SARS-CoV-2","CGCAACTGAATAAAGT",1,12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90L N107T",2
"lib1","SARS-CoV-2","CGCAACTGATAGGGAT",2,8.56,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N13A Y21K F70I L95P",4
"lib1","SARS-CoV-2","CGCAACTTAATTGAGA",5,11.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12A A33Q E76G N92S N157Q F167T",6
"lib1","SARS-CoV-2","CGCAACTTTGCGGAAC",1,15.45,10.58,-0.18,0.07,2.88,1.08,0,"1 nonsynonymous","Q144M",1
"lib1","SARS-CoV-2","CGCAAGAACACTCTTT",11,124.71,10.77,0.01,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCAAGAACGCAAAAT",1,32.69,6.9,-3.86,0.21,1.5,1.06,0.02,">1 nonsynonymous","N1L G101Y G117Y",3
"lib1","SARS-CoV-2","CGCAAGAAGGAGCTTG",13,197.79,9.71,-1.05,0.09,2.06,1.05,0,">1 nonsynonymous","A81L D98N G116S",3
"lib1","SARS-CoV-2","CGCAAGAATATTGATC",5,33.23,9.09,-1.68,0.14,1.63,1.23,0.01,"1 nonsynonymous","Y50C",1
"lib1","SARS-CoV-2","CGCAAGACAATATTGG",1,58.69,10.69,-0.07,0.06,2.83,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCAAGATAAATCAAT",7,28.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V103L R127I F134D E141R K198T",5
"lib1","SARS-CoV-2","CGCAAGCTTTCGCTAT",8,36.4,9.89,-0.87,0.08,2.03,1.04,0,">1 nonsynonymous","N1K C6Y D97G",3
"lib1","SARS-CoV-2","CGCAAGGAGTAATAAA",2,22.84,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A81T D90W G101D S113T",4
"lib1","SARS-CoV-2","CGCAAGGCGATAGTAC",4,10.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P82G I104D Y123D R136I C158M",5
"lib1","SARS-CoV-2","CGCAAGTAAGAAAAGG",3,0.39,NA,NA,NA,NA,NA,NA,"stop","G83* K94M W106R N151L F156L",5
"lib1","SARS-CoV-2","CGCAAGTGACTTGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V52* R73L G83Q P177S",4
"lib1","SARS-CoV-2","CGCAATAAATTACCAG",1,9.02,8.44,-2.33,0.21,1.59,1.26,0.02,">1 nonsynonymous","N13V S139R",2
"lib1","SARS-CoV-2","CGCAATAACAGTCACT",3,51,10.05,-0.71,0.14,2.26,1.04,0.01,">1 nonsynonymous","C6S R16F Q163C",3
"lib1","SARS-CoV-2","CGCAATACCACCTATA",7,17.28,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K26L C49S T140V L162M",4
"lib1","SARS-CoV-2","CGCAATAGGGAAACAT",5,8.32,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","L5E A89W D112R V181Q",4
"lib1","SARS-CoV-2","CGCAATCCCGACGGTG",2,31.61,10.28,-0.49,0.12,2.67,1,0.01,">1 nonsynonymous","G51H D59N A67I N130S",4
"lib1","SARS-CoV-2","CGCAATCTCTAATGAA",5,52.56,9.99,-0.77,0.07,2.65,1.04,0,">1 nonsynonymous","P54E V173P",2
"lib1","SARS-CoV-2","CGCAATGACCATACAC",3,0.8,NA,NA,NA,NA,NA,NA,"stop","F47K F62L P82* G86V P96R Y123V L162S",7
"lib1","SARS-CoV-2","CGCAATGCACTACCCT",2,96.22,10.29,-0.47,0.03,2.92,1.01,0,">1 nonsynonymous","R27E I104L N120F",3
"lib1","SARS-CoV-2","CGCAATGGTTATGATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S V71M T85R L95E T100M L111P",6
"lib1","SARS-CoV-2","CGCAATGTCGAGGTAA",4,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G P149M S184N T201G",4
"lib1","SARS-CoV-2","CGCAATTCAAGAATTA",3,7.24,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C49G D59S L95T T170N",4
"lib1","SARS-CoV-2","CGCAATTTCCAACCAA",1,23.93,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","R27G T55D R78T R179S",4
"lib1","SARS-CoV-2","CGCAATTTTAAAGCTA",1,24.18,10.09,-0.68,0.08,2.97,1,0,">1 nonsynonymous","S129M Y175H",2
"lib1","SARS-CoV-2","CGCACAAAAGGGACCT",4,50,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5D Y93Q G101N",3
"lib1","SARS-CoV-2","CGCACAAAAGTCTACC",12,31.67,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K94R C102R G172K",3
"lib1","SARS-CoV-2","CGCACAAAGACAGTAT",4,31.23,8.77,-1.99,0.31,1.5,1,0.04,">1 nonsynonymous","A42M N107V Y143H T148V T201S",5
"lib1","SARS-CoV-2","CGCACAAAGTAACGAT",1,12.6,10.16,-0.61,0.15,2.72,1,0.01,"1 nonsynonymous","P133C",1
"lib1","SARS-CoV-2","CGCACAACCAGTTATT",1,7.69,7.35,-3.42,0.21,1.8,1.06,0.01,">1 nonsynonymous","I2Y C6A G83E Y119S",4
"lib1","SARS-CoV-2","CGCACAACGCGTCTGA",3,34.16,8.59,-2.17,0.16,1.8,1.09,0.01,"1 nonsynonymous","G86C",1
"lib1","SARS-CoV-2","CGCACAAGAACCAAAT",1,42.78,9.39,-1.37,0.09,2.5,1.11,0,">1 nonsynonymous","K56L I80L G174D G196M",4
"lib1","SARS-CoV-2","CGCACAAGCCTTACGC",11,49.78,8.17,-2.6,0.4,1.5,1,0.08,">1 nonsynonymous","K56S I104T P133R T148C",4
"lib1","SARS-CoV-2","CGCACAAGTCCCCGAA",6,50.85,6.45,-4.31,0.61,1.5,1.18,0.03,">1 nonsynonymous","L131A T148M G166V L183F",4
"lib1","SARS-CoV-2","CGCACAATCAATAACC",3,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N P82L",2
"lib1","SARS-CoV-2","CGCACAATTCCACTAC",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87C S200Y",2
"lib1","SARS-CoV-2","CGCACACACTGTAACC",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T S36C C49G I88T S113C P133L",6
"lib1","SARS-CoV-2","CGCACACAGTCCCAGT",4,9.68,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L95Q R136T",2
"lib1","SARS-CoV-2","CGCACACCAAACCCAG",2,37.53,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","R124T E141A P149V",3
"lib1","SARS-CoV-2","CGCACACCAATTTATT",3,21.31,10.8,0.03,0.05,2.98,1,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","CGCACACGTTCACGAT",8,48.5,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35H F44D T55S D68L D90W",5
"lib1","SARS-CoV-2","CGCACACTACTTCTCC",1,0.6,NA,NA,NA,NA,NA,NA,"stop","W23A K48* K56G E141Y",4
"lib1","SARS-CoV-2","CGCACACTATTTCAAA",12,268.94,10.57,-0.2,0.04,2.94,1.01,0,"1 nonsynonymous","F44G",1
"lib1","SARS-CoV-2","CGCACAGAAAATTGAA",3,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E S19F F62P",3
"lib1","SARS-CoV-2","CGCACAGAGCCTATTA",5,53.78,9.65,-1.11,0.13,2.04,1.07,0.01,">1 nonsynonymous","C31Q T55L F134S",3
"lib1","SARS-CoV-2","CGCACAGAGTGAACTC",2,46.8,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A14Y N58F D98A G155V",4
"lib1","SARS-CoV-2","CGCACAGATCAATATC",4,56.1,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V20T F44M T63F N110R Q144K A145L",6
"lib1","SARS-CoV-2","CGCACAGCGGAACATT",1,10.25,10.87,0.11,0.16,2.97,1,0.01,">1 nonsynonymous","I2R A14R N24E",3
"lib1","SARS-CoV-2","CGCACAGGTCAATATT",10,121.31,9.84,-0.93,0.09,2.1,1.03,0,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","CGCACAGTAAGATTAC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","T3* T55W F62P G116W Y123R",5
"lib1","SARS-CoV-2","CGCACAGTAGAACCGC",1,25.4,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T55I A105R",2
"lib1","SARS-CoV-2","CGCACATCAATATATA",1,94.25,10.69,-0.07,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CGCACATGACGGACCG",8,127.05,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","C31Q A67I T100P",3
"lib1","SARS-CoV-2","CGCACATTTTTCACGA",3,2.58,NA,NA,NA,NA,NA,NA,"stop","S53N K128Y G152*",3
"lib1","SARS-CoV-2","CGCACCCTCAACATAA",3,55.2,10.76,0,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCACCCTCCACTGAG",3,134.64,10.68,-0.08,0.03,2.96,1.02,0,"1 nonsynonymous","L60N",1
"lib1","SARS-CoV-2","CGCACCCTCTGGTCCT",3,96.11,8.86,-1.9,0.06,2.97,1.01,0,"1 nonsynonymous","G166Y",1
"lib1","SARS-CoV-2","CGCACCCTGAAACGGT",8,84.52,8.58,-2.18,0.35,1.5,1,0.05,">1 nonsynonymous","Y35V V103S T148G",3
"lib1","SARS-CoV-2","CGCACCGTAATACGTG",1,1.01,NA,NA,NA,NA,NA,NA,"stop","C6* C61M F167T",3
"lib1","SARS-CoV-2","CGCACCTAGTCCAGTA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","G9* C49M A89V Y178H",4
"lib1","SARS-CoV-2","CGCACCTCATCCGGGC",4,57.78,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T63D G86D K94E S147E F160M C195L",6
"lib1","SARS-CoV-2","CGCACCTGGAACACGT",3,22.94,6,-4.76,1.78,1.5,1.26,0.06,">1 nonsynonymous","S45F K56E P82F K87L E135S",5
"lib1","SARS-CoV-2","CGCACGAAAATTACAC",2,51.46,6.73,-4.03,0.3,1.5,1.08,0.01,">1 nonsynonymous","Y35H F47N D59Q Y93R F160N T201K",6
"lib1","SARS-CoV-2","CGCACGAAGCTTGCAA",25,413.34,10.83,0.06,0.06,2.91,1.05,0,">1 nonsynonymous","T85V N130K",2
"lib1","SARS-CoV-2","CGCACGAAGGTCTGGT",2,25.74,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D34G L122C L183Q",3
"lib1","SARS-CoV-2","CGCACGACTCCCGCGC",1,28.33,6,-4.76,1.33,1.5,1.1,0.01,">1 nonsynonymous","A42V G86C F99M L131P P149S P161V",6
"lib1","SARS-CoV-2","CGCACGACTGCCTGAA",4,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107K N157I T201M",3
"lib1","SARS-CoV-2","CGCACGAGACTTAAAG",2,45.28,8.64,-2.13,0.2,2.59,1.11,0.01,">1 nonsynonymous","T3L Y175C",2
"lib1","SARS-CoV-2","CGCACGAGAGTGGTAC",4,143.12,10.76,0,0.07,2.9,1.07,0,"1 nonsynonymous","I2Q",1
"lib1","SARS-CoV-2","CGCACGATGTGCCCTA",7,151.68,10.61,-0.16,0.05,2.92,1.01,0,">1 nonsynonymous","C61S A145V",2
"lib1","SARS-CoV-2","CGCACGCCTAAAATAA",6,190.49,10.78,0.01,0.05,2.91,1.03,0,">1 nonsynonymous","D97K E154T",2
"lib1","SARS-CoV-2","CGCACGCTGAATAACA",7,17.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63M L183P",2
"lib1","SARS-CoV-2","CGCACGCTTACTCGCC",4,0.41,NA,NA,NA,NA,NA,NA,"stop","L57H I104* K128S Q176S S184M",5
"lib1","SARS-CoV-2","CGCACGGGGACTAACA",4,1.74,NA,NA,NA,NA,NA,NA,"stop","R25I P133* P161L T170L L188N",5
"lib1","SARS-CoV-2","CGCACGTAGCTCAAGG",1,15.92,6,-4.76,2,3,1.06,0,">1 nonsynonymous","C102W W106E S147N",3
"lib1","SARS-CoV-2","CGCACTAAAAAAAAGG",1,8.92,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","F70I D90S G116F",3
"lib1","SARS-CoV-2","CGCACTAAAAAACCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S W23Q D34*",3
"lib1","SARS-CoV-2","CGCACTAAAAATCCAA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","T3R N40I T100A N151P T201*",5
"lib1","SARS-CoV-2","CGCACTAGCACATAAC",2,40.88,10.86,0.1,0.08,2.97,1,0,">1 nonsynonymous","N1S T100I",2
"lib1","SARS-CoV-2","CGCACTAGCCACCTAG",1,54.7,9.12,-1.64,0.17,1.5,1.21,0.02,">1 nonsynonymous","A14V F44L I72L N120Y",4
"lib1","SARS-CoV-2","CGCACTAGCTATTATG",8,54.97,7.74,-3.03,0.26,1.5,1.12,0.03,">1 nonsynonymous","T3M G86S K128L",3
"lib1","SARS-CoV-2","CGCACTATATCCCCCG",3,8.01,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","T15A L38R N118T T148I A190L",5
"lib1","SARS-CoV-2","CGCACTTTGTAAGGAT",2,13.62,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9T G101F T170P T201R",4
"lib1","SARS-CoV-2","CGCACTTTTCATAAGG",9,131.5,9.79,-0.97,0.11,1.98,1.08,0,">1 nonsynonymous","C6T N13D Y39S",3
"lib1","SARS-CoV-2","CGCAGAAAAGAAATCT",10,161.11,7.68,-3.08,0.13,2.08,1.1,0.01,">1 nonsynonymous","N118Q F126G",2
"lib1","SARS-CoV-2","CGCAGAAAGGGGATAG",2,78.56,10.56,-0.21,0.03,2.92,1.05,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","CGCAGAAATAACAAAG",1,14.6,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C49E L95Y N120F",3
"lib1","SARS-CoV-2","CGCAGAAGAAGGTCAA",1,66.98,8.69,-2.08,0.08,2.83,1.04,0,">1 nonsynonymous","L125S Q176K",2
"lib1","SARS-CoV-2","CGCAGAAGATAAAAAC",4,164.2,9.65,-1.11,0.07,2.74,1.07,0,">1 nonsynonymous","L5Q Q84L L125P",3
"lib1","SARS-CoV-2","CGCAGAATTTAAACAC",10,145.79,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14Y S29V S45V D59Y K132N",5
"lib1","SARS-CoV-2","CGCAGACATGCTCTAA",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R I104R T148V E154M",4
"lib1","SARS-CoV-2","CGCAGACTCACTTAAT",11,110.75,9.55,-1.21,0.11,2.21,1.09,0,">1 nonsynonymous","P133T G155A",2
"lib1","SARS-CoV-2","CGCAGACTGTTGACGA",2,20.77,10.33,-0.43,0.08,2.9,1.04,0,">1 nonsynonymous","F8Y D97V E154P",3
"lib1","SARS-CoV-2","CGCAGACTTACTAATA",1,7.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K56G D68W",2
"lib1","SARS-CoV-2","CGCAGAGAGTAAACGA",7,51.48,9.98,-0.78,0.1,2.38,1.06,0,">1 nonsynonymous","G51R D59Y F160I",3
"lib1","SARS-CoV-2","CGCAGAGCCTGTCGTA",1,13.37,10.38,-0.38,0.2,2.76,1.08,0.05,">1 nonsynonymous","K114R S129D S164G H189Q",4
"lib1","SARS-CoV-2","CGCAGAGGAACTAGCA",4,24.28,9.98,-0.79,0.14,2.3,1.01,0.01,">1 nonsynonymous","T3R Q84F P149Q",3
"lib1","SARS-CoV-2","CGCAGAGTATGTGAGC",6,61.75,10.17,-0.6,0.1,2.45,1.01,0.01,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","CGCAGAGTGAAAAACT",5,39.66,10.78,0.01,0.09,2.91,1.03,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","CGCAGATATCTACACA",3,8.81,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","P7S A33R L60C W106L C158T",5
"lib1","SARS-CoV-2","CGCAGATCGATATCAT",1,14.09,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","T15I V71R I142R",3
"lib1","SARS-CoV-2","CGCAGATGACATAGGC",14,67.46,6.06,-4.7,0.56,1.5,1.17,0.01,">1 nonsynonymous","W23F V77N F156L",3
"lib1","SARS-CoV-2","CGCAGATGAGGCCAAT",1,5.67,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","N64L Y93D",2
"lib1","SARS-CoV-2","CGCAGATTTTACTTTC",7,110.33,10.39,-0.37,0.03,2.84,1.05,0,"1 nonsynonymous","E135M",1
"lib1","SARS-CoV-2","CGCAGCAAAAGCGGCC",1,86.85,8.33,-2.43,0.27,1.78,1.16,0.03,">1 nonsynonymous","N107T Y119F",2
"lib1","SARS-CoV-2","CGCAGCAAATATTAAT",7,40.68,6.9,-3.86,0.33,1.5,1.06,0.02,">1 nonsynonymous","L5G E135V Q144F F156L",4
"lib1","SARS-CoV-2","CGCAGCAACTTACTAA",2,7.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41Y T55C V103K R136G",4
"lib1","SARS-CoV-2","CGCAGCCACGTCTCCG",2,23.07,9.46,-1.31,0.18,1.95,1.06,0.03,">1 nonsynonymous","F44V T63R G146Y F160R",4
"lib1","SARS-CoV-2","CGCAGCGTCATTACAA",4,45.04,9.95,-0.82,0.1,2.61,1.08,0,">1 nonsynonymous","I2S P7S Y35S T63Y A105S K114S",6
"lib1","SARS-CoV-2","CGCAGCTCTTACCGCA",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30M K94N G117C S129Y L183Y",5
"lib1","SARS-CoV-2","CGCAGGAGTGACTTAG",1,23.07,7.63,-3.13,0.41,1.5,1.16,0.07,">1 nonsynonymous","S53Y C61Y D90G I138S T201H",5
"lib1","SARS-CoV-2","CGCAGGAGTGGTAACC",4,41.16,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R127V G172R",2
"lib1","SARS-CoV-2","CGCAGGCTAATTACTG",4,34.11,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A33E C49I S200F",3
"lib1","SARS-CoV-2","CGCAGGCTCACTCAAT",2,127.62,10.07,-0.69,0.05,2.88,1.03,0,"1 nonsynonymous","C31R",1
"lib1","SARS-CoV-2","CGCAGGGACACAAAAC",3,35.74,8.79,-1.97,0.15,1.93,1.19,0.01,">1 nonsynonymous","I2G A18L N64M N120K G174K T201K",6
"lib1","SARS-CoV-2","CGCAGGGTACTACACC",4,34.21,10.64,-0.12,0.06,3,1,0,"1 nonsynonymous","K48H",1
"lib1","SARS-CoV-2","CGCAGGTGACATGTCC",4,24.27,8.7,-2.06,0.24,2.04,1.14,0.04,">1 nonsynonymous","F44S Y175Q",2
"lib1","SARS-CoV-2","CGCAGTAATATACGGG",11,109.54,10.5,-0.26,0.04,2.9,1.02,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","CGCAGTACTCAACGCT",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y Y123M C158S",3
"lib1","SARS-CoV-2","CGCAGTACTGTTCTCC",1,13.88,10.77,0.01,0.06,2.94,1.08,0,"1 nonsynonymous","K56I",1
"lib1","SARS-CoV-2","CGCAGTAGCAAGGTGG",7,83.31,10.66,-0.1,0.05,2.94,1.01,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","CGCAGTAGGCCTGCTA",10,114.94,10.34,-0.42,0.05,2.88,1.01,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","CGCAGTATGACTTTGA",5,1.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","CGCAGTATTTAGAAGT",1,8.05,10.38,-0.38,0.14,2.64,1,0.01,">1 nonsynonymous","Y35F G116H P133Q",3
"lib1","SARS-CoV-2","CGCAGTCCAGATTCCA",6,93.59,10.42,-0.34,0.05,2.88,1.03,0,">1 nonsynonymous","S41M S53Q D98Q V173F",4
"lib1","SARS-CoV-2","CGCAGTCTTCAATTTG",3,0.21,NA,NA,NA,NA,NA,NA,"stop","W106* I142L G174P",3
"lib1","SARS-CoV-2","CGCAGTGAAAACCCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37T L60* N110L Y175T S184A T201M",6
"lib1","SARS-CoV-2","CGCAGTGATGTGACAG",1,6.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C G86W",2
"lib1","SARS-CoV-2","CGCAGTTACGGGTAGG",4,26.18,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","T63G Q84L P133D P149L K198Q",5
"lib1","SARS-CoV-2","CGCAGTTAGAGCTAAA",4,83.36,6,-4.76,0.5,1.5,1.1,0,">1 nonsynonymous","N1E Y93T",2
"lib1","SARS-CoV-2","CGCAGTTGACAGATAT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","G9* Y66* S108W R127H N151T F156W",6
"lib1","SARS-CoV-2","CGCAGTTGTGCTCTAC",6,89.7,10.84,0.07,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCAGTTTGGTCGACA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","F70C L131* E141K",3
"lib1","SARS-CoV-2","CGCATAAACGAGATGA",3,91.54,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L57T G83F Y119F E154D G166S Y175L L188F",7
"lib1","SARS-CoV-2","CGCATAACGGGGAAAG",2,32.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6P K48N D68W G117K G152T",5
"lib1","SARS-CoV-2","CGCATACAAGAGCTGC",11,129.76,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12L N40P F70R F99A",4
"lib1","SARS-CoV-2","CGCATACATCGCGGCT",5,6.38,NA,NA,NA,NA,NA,NA,"stop","C31G L60V Y91*",3
"lib1","SARS-CoV-2","CGCATACATGCTGCCG",2,1.98,NA,NA,NA,NA,NA,NA,"stop","L95* G101W N118C L162R P177G",5
"lib1","SARS-CoV-2","CGCATACCCCCGGTTG",2,94.56,10.28,-0.49,0.05,2.83,1.07,0,">1 nonsynonymous","L60S N130Y G196M",3
"lib1","SARS-CoV-2","CGCATACCTAAAAAAC",2,37.69,10.74,-0.03,0.11,2.75,1,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","CGCATACGTAAAGGAG",1,27.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Y123D",2
"lib1","SARS-CoV-2","CGCATACTATACGGAT",5,119.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K56E F99C Q176L",3
"lib1","SARS-CoV-2","CGCATACTGAATACTC",4,60.21,6,-4.76,1.09,1.5,1.17,0.02,">1 nonsynonymous","L131P C150Q",2
"lib1","SARS-CoV-2","CGCATACTTAGTACCA",3,12.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D34R G101N V115S T148V",4
"lib1","SARS-CoV-2","CGCATACTTCTAACAA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116C V173G",2
"lib1","SARS-CoV-2","CGCATAGCCGAGCTAG",3,8.58,8.71,-2.05,0.26,2.28,1.16,0.03,">1 nonsynonymous","G9R T15G A42G C61P G83L Y119I Q163K",7
"lib1","SARS-CoV-2","CGCATATCCAATATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19R T85K S129L T170* Y175D E186S",6
"lib1","SARS-CoV-2","CGCATATCTCCATGTA",3,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y A33L S43F A105F G152P",5
"lib1","SARS-CoV-2","CGCATCAATGAATAGG",5,41.38,10.7,-0.07,0.07,2.92,1.04,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","CGCATCAGGGACAAGA",5,41.23,8.66,-2.1,0.24,2.15,1.13,0.02,"1 nonsynonymous","Y165C",1
"lib1","SARS-CoV-2","CGCATCATACATACGA",10,3.22,NA,NA,NA,NA,NA,NA,"stop","I72N G83R K199*",3
"lib1","SARS-CoV-2","CGCATCATCAGGTTTA",5,18.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10G A22E D34F K56L I88V C158P",6
"lib1","SARS-CoV-2","CGCATCATTGTCAGGA",3,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S S139Y G196V",3
"lib1","SARS-CoV-2","CGCATCATTTTGACAA",6,91.98,10.76,0,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCATGACAACGTCAA",1,9.61,10.81,0.04,0.13,2.93,1.06,0.01,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","CGCATGAGTATGAGAG",5,41.19,10.25,-0.52,0.12,2.37,1,0.01,">1 nonsynonymous","V52P Y66F T100M",3
"lib1","SARS-CoV-2","CGCATGATAAACCCTC",1,41.76,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A18S D34G K94I",3
"lib1","SARS-CoV-2","CGCATGCAAATTAAAC",7,69.76,6.37,-4.39,0.72,1.5,1.17,0.04,">1 nonsynonymous","F8M R136G V182L",3
"lib1","SARS-CoV-2","CGCATGCGTTCCTAAA",7,92.02,7.18,-3.59,0.26,1.5,1.12,0.02,">1 nonsynonymous","K48Y L60P D98G",3
"lib1","SARS-CoV-2","CGCATGTGCATCAAAG",6,55.32,10.38,-0.38,0.05,2.94,1.02,0,">1 nonsynonymous","S41L G51K",2
"lib1","SARS-CoV-2","CGCATGTGTTGCAGAT",2,33.32,8.22,-2.55,0.27,1.5,1.13,0.02,">1 nonsynonymous","D90S R136G",2
"lib1","SARS-CoV-2","CGCATGTTGAACGCGA",8,15.77,8.4,-2.36,0.7,1.99,1.13,0.07,">1 nonsynonymous","T3N V103Y T148F",3
"lib1","SARS-CoV-2","CGCATTAAAATCCAGT",6,166.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37Y T55G K94V T100I R124C N157L",6
"lib1","SARS-CoV-2","CGCATTAATAATAAAT",2,10.9,9.84,-0.92,0.11,2.44,1,0,">1 nonsynonymous","I138H P169R L183I",3
"lib1","SARS-CoV-2","CGCATTAGGTGTACCC",5,43.1,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9A D75L C158Y",3
"lib1","SARS-CoV-2","CGCATTATAAAAATGC",5,77.11,6.25,-4.51,0.34,1.5,1.12,0.01,">1 nonsynonymous","L5H R16I R78G G83M E141M T148V Y165D G174V K199I",9
"lib1","SARS-CoV-2","CGCATTATCCCTCTCA",1,1.97,NA,NA,NA,NA,NA,NA,"stop","I28* Y91T S184I",3
"lib1","SARS-CoV-2","CGCATTATCTGAGATA",1,33.65,9.96,-0.8,0.09,2.48,1.01,0,">1 nonsynonymous","F62L D90G",2
"lib1","SARS-CoV-2","CGCATTCACAATGAAA",2,5.4,NA,NA,NA,NA,NA,NA,"stop","Q84* I142S",2
"lib1","SARS-CoV-2","CGCATTCAGATAGGCC",10,207.01,9.61,-1.16,0.13,1.84,1.09,0.01,"1 nonsynonymous","V173T",1
"lib1","SARS-CoV-2","CGCATTCTCCCGGAGT",3,36.8,10.34,-0.42,0.06,2.88,1.01,0,">1 nonsynonymous","D59F N151I",2
"lib1","SARS-CoV-2","CGCATTGAGCTAGAAA",6,92.84,10.77,0.01,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCATTGCCCCCAACC",2,5.53,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","Y21K A33M S45W V173I",4
"lib1","SARS-CoV-2","CGCATTGCCTGACCGC",2,6.37,6.32,-4.44,1.32,3,1.06,0.01,">1 nonsynonymous","N13R R25V C61P Y91R L131F",5
"lib1","SARS-CoV-2","CGCATTGGGTTTTTTG",1,71.41,8.59,-2.18,0.15,1.68,1.17,0.01,">1 nonsynonymous","F12N L122W",2
"lib1","SARS-CoV-2","CGCATTGGTTCATTCT",7,3.33,NA,NA,NA,NA,NA,NA,"stop","I2V K26S N40* W106L",4
"lib1","SARS-CoV-2","CGCATTGTCGCCCAGA",2,7.67,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C61P A105H",2
"lib1","SARS-CoV-2","CGCATTGTTAAAACAA",1,5.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L S139L E186W",3
"lib1","SARS-CoV-2","CGCATTTAAAAACCGA",7,73.66,10.52,-0.24,0.05,2.96,1,0,">1 nonsynonymous","G51Q T148D",2
"lib1","SARS-CoV-2","CGCATTTACCAGACAG",1,42.91,10.3,-0.46,0.07,2.81,1,0,">1 nonsynonymous","D98T L131M T148I",3
"lib1","SARS-CoV-2","CGCATTTACGCGCGCA",5,65.17,10.65,-0.11,0.05,2.92,1.04,0,">1 nonsynonymous","D97L S184G",2
"lib1","SARS-CoV-2","CGCATTTAGCTATTTC",5,1.57,NA,NA,NA,NA,NA,NA,"stop","C6* P197K",2
"lib1","SARS-CoV-2","CGCATTTATATGGGAA",1,14.43,10.13,-0.63,0.1,2.72,1,0,">1 nonsynonymous","I2L A14D L60T",3
"lib1","SARS-CoV-2","CGCATTTCAAATTCAC",1,13.39,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61G G101D R124H K132S",4
"lib1","SARS-CoV-2","CGCATTTCCATAGAAT",2,14.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D59V P82K S147A",3
"lib1","SARS-CoV-2","CGCATTTCCGTACATG",3,50.17,6,-4.76,1.69,1.5,1.16,0.04,">1 nonsynonymous","L5W R25W T140L T201A",4
"lib1","SARS-CoV-2","CGCATTTCGTAAATGA",3,40.75,10.89,0.12,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCATTTGACTTCAAA",10,123.27,9.7,-1.06,0.09,1.81,1.14,0,">1 nonsynonymous","A14Q G83T F185L",3
"lib1","SARS-CoV-2","CGCATTTGATGTACAG",9,110.54,8.67,-2.09,0.12,2.62,1.05,0.01,">1 nonsynonymous","I2M Y91I G166I",3
"lib1","SARS-CoV-2","CGCATTTGTCCCGGGC",2,16.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12S R27L V65R N107L N120L",5
"lib1","SARS-CoV-2","CGCCAAACTAGCCCGC",4,119.17,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G9F V32S D68A N107A Y123A",5
"lib1","SARS-CoV-2","CGCCAAACTTACAACA",1,29.51,9.97,-0.79,0.12,2.45,1.03,0.01,">1 nonsynonymous","K94R G152V",2
"lib1","SARS-CoV-2","CGCCAAAGTGGTCCGC",1,0.09,NA,NA,NA,NA,NA,NA,"stop","L57V Y93* T170A K199N",4
"lib1","SARS-CoV-2","CGCCAAATATACAAAT",2,7.16,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","A42V V77K G101R P191S",4
"lib1","SARS-CoV-2","CGCCAAATCAGAGAAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","L111F N120P S129Y P149* F156L",5
"lib1","SARS-CoV-2","CGCCAAATCAGGCTCC",4,13.52,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","N1C N40T R127V",3
"lib1","SARS-CoV-2","CGCCAACATGTTCCCT",5,76.37,10.73,-0.03,0.06,2.9,1.04,0,">1 nonsynonymous","A42F V173R",2
"lib1","SARS-CoV-2","CGCCAACCAGAAAGCA",8,55.51,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","CGCCAACGCAATATCA",4,108.3,9.94,-0.82,0.08,2.03,1.07,0,"1 nonsynonymous","Y50T",1
"lib1","SARS-CoV-2","CGCCAACTAAAGCACA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75P F99W N171S",3
"lib1","SARS-CoV-2","CGCCAAGCTTGATATG",9,5521.96,10.76,0,0.05,2.93,1.03,0,"1 nonsynonymous","S43K",1
"lib1","SARS-CoV-2","CGCCAATACAAAGAAA",5,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F D59T D68M",3
"lib1","SARS-CoV-2","CGCCAATATAACATAA",6,41.57,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R16S L95R V180I",3
"lib1","SARS-CoV-2","CGCCAATCAAACTAAA",3,57.91,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14L S29P V37S L60P P82L Y91G F99Y",7
"lib1","SARS-CoV-2","CGCCAATCTGGTTAAA",2,24.69,8.02,-2.74,0.21,1.53,1.12,0.02,">1 nonsynonymous","C6L Y91K",2
"lib1","SARS-CoV-2","CGCCAATGCAAGAAAG",2,79.97,10.74,-0.03,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCACAAGAGATACC",4,139.09,10.5,-0.26,0.06,2.93,1.01,0,">1 nonsynonymous","E10S V37D G196V",3
"lib1","SARS-CoV-2","CGCCACACATCTCAAG",2,3.79,NA,NA,NA,NA,NA,NA,"stop","P7* F12V K56C C61H R73N Y91C",6
"lib1","SARS-CoV-2","CGCCACACATTGACTA",5,44.33,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L38S V103Q Q176S",3
"lib1","SARS-CoV-2","CGCCACAGGTTTTGTA",4,58.43,10.68,-0.08,0.04,2.95,1.02,0,"1 nonsynonymous","A67C",1
"lib1","SARS-CoV-2","CGCCACATTTCCTTTA",5,61.63,10.67,-0.09,0.07,2.86,1.04,0,"1 nonsynonymous","N64M",1
"lib1","SARS-CoV-2","CGCCACCTACACCTTC",5,52.4,8.3,-2.47,0.21,1.5,1.04,0.02,">1 nonsynonymous","V37G G86R N171M",3
"lib1","SARS-CoV-2","CGCCACCTGGAGAGTC",5,95.93,10.64,-0.12,0.04,2.86,1.04,0,">1 nonsynonymous","G9K N64S P96S Q163V",4
"lib1","SARS-CoV-2","CGCCACGACGAATTTT",10,116.34,10.33,-0.43,0.07,2.9,1,0,">1 nonsynonymous","T15G C61D",2
"lib1","SARS-CoV-2","CGCCACGCCGGACCGT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","P7N V37I Q79K F99* L183M",5
"lib1","SARS-CoV-2","CGCCACTCACGTCGAC",1,46.71,8.32,-2.44,0.15,2.48,1.08,0.01,">1 nonsynonymous","V52M N171D",2
"lib1","SARS-CoV-2","CGCCACTCCTCCCTAT",2,42.14,10.89,0.12,0.1,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCACTTCTTTTCAG",1,13.69,8.94,-1.82,0.13,2.21,1.04,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","CGCCAGACGGTGCATA",1,12.29,9.12,-1.65,0.24,1.66,1.06,0.03,">1 nonsynonymous","P133I G155I",2
"lib1","SARS-CoV-2","CGCCAGCTCAATAGTT",1,9.85,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","F99V R136C",2
"lib1","SARS-CoV-2","CGCCAGGATTGATATA",4,19.75,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D137S G146V Y159T",3
"lib1","SARS-CoV-2","CGCCAGGGGTACAAGA",6,29.77,7.5,-3.26,0.34,1.65,1.28,0.03,">1 nonsynonymous","R16P S69G G196W",3
"lib1","SARS-CoV-2","CGCCAGTATAAGGCAC",1,32.83,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","F47V G101M",2
"lib1","SARS-CoV-2","CGCCAGTCAGGAAAAT",3,34.77,7.98,-2.79,0.17,1.57,1.1,0.01,">1 nonsynonymous","A105F G155S Q163N",3
"lib1","SARS-CoV-2","CGCCATAGCAAGTTTC",4,102.46,9.95,-0.82,0.05,2.89,1.02,0,"1 nonsynonymous","E154W",1
"lib1","SARS-CoV-2","CGCCATATTTATGTAG",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V G83W D98Y",3
"lib1","SARS-CoV-2","CGCCATCGACAAAAAA",2,13.86,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9W A33T K56A N107G D112L K132W Q176R",7
"lib1","SARS-CoV-2","CGCCATCTGGTCCCCC",3,21.72,10.67,-0.09,0.14,2.89,1.09,0.01,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","CGCCATGCTAATAAAC",8,21.94,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37L S45F C102M V103M",4
"lib1","SARS-CoV-2","CGCCATGGACGCCTGC",2,3437.1,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","P7H I138R G166V Y175E",4
"lib1","SARS-CoV-2","CGCCATTACAACTTTT",2,26.15,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9F E76S I88A",3
"lib1","SARS-CoV-2","CGCCATTGTCCTAATC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib1","SARS-CoV-2","CGCCATTTTTCACGGA",6,114.31,10.64,-0.13,0.08,2.87,1.09,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","CGCCCAACTCTTGACA",4,23.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68L V71D P161N",3
"lib1","SARS-CoV-2","CGCCCAAGTAGTTTAT",3,73.09,9.61,-1.15,0.05,2.85,1.04,0,">1 nonsynonymous","A42Y L60I K114T F156S",4
"lib1","SARS-CoV-2","CGCCCAAGTTTCTTAA",4,89.33,10.64,-0.12,0.06,2.91,1.03,0,"1 nonsynonymous","V32H",1
"lib1","SARS-CoV-2","CGCCCAATTTAATCCA",2,4.65,NA,NA,NA,NA,NA,NA,"stop","N1L T55K S108E V173* V181S",5
"lib1","SARS-CoV-2","CGCCCACAATCGATCC",1,47.84,10.72,-0.04,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCCACATAGAGAAA",1,3.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","CGCCCAGAACTCGCAT",2,12.99,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","L95K R179L",2
"lib1","SARS-CoV-2","CGCCCAGTTAGCTGAA",7,37.35,10.77,0,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCCATACCATTGAG",2,22.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D S147G",2
"lib1","SARS-CoV-2","CGCCCATGCAGTCCGA",2,52.87,10.02,-0.75,0.05,2.79,1,0,">1 nonsynonymous","A105Q L122H P197T",3
"lib1","SARS-CoV-2","CGCCCATGGTGACACC",2,82.32,9.91,-0.86,0.08,2.43,1.05,0,">1 nonsynonymous","S53L G116P Y123A",3
"lib1","SARS-CoV-2","CGCCCATTGTTTCCAG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N64C P82T V103A G116*",4
"lib1","SARS-CoV-2","CGCCCCAAAACTGAAA",1,16.89,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F62K K94L",2
"lib1","SARS-CoV-2","CGCCCCAAAAGGAATG",3,24.22,8.13,-2.63,0.17,1.77,1.18,0.01,">1 nonsynonymous","N107G N118C",2
"lib1","SARS-CoV-2","CGCCCCAAATTTAAAT",1,6.64,6.06,-4.7,2,3,1.13,0.01,">1 nonsynonymous","A18T Y35C D97F Y123G Y159M V173S V181F",7
"lib1","SARS-CoV-2","CGCCCCACACCAATAA",7,137.86,10.71,-0.05,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCCCACAGTGGGTC",2,17.69,9.2,-1.56,0.21,1.57,1.13,0.02,">1 nonsynonymous","D90H Q144F T201K",3
"lib1","SARS-CoV-2","CGCCCCACGTTCACGG",1,24.11,10.08,-0.68,0.16,2.23,1,0.01,">1 nonsynonymous","N24K P82L",2
"lib1","SARS-CoV-2","CGCCCCAGAATCGAAT",3,42.56,10.78,0.02,0.08,2.9,1.05,0,">1 nonsynonymous","T148K A190Y",2
"lib1","SARS-CoV-2","CGCCCCATAAACATAA",5,22.41,10.71,-0.06,0.07,2.88,1.05,0,">1 nonsynonymous","S36K F160G S200C",3
"lib1","SARS-CoV-2","CGCCCCATGCCACCCC",7,80.21,10.72,-0.04,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCCCCCATGAACGA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","F12V W23C W106* N120P K132S",5
"lib1","SARS-CoV-2","CGCCCCCGCAGAGTCT",1,27.87,6,-4.76,2,1.79,1.18,0.02,"1 nonsynonymous","R179Y",1
"lib1","SARS-CoV-2","CGCCCCCTATCACACC",5,18.51,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9H F99T",2
"lib1","SARS-CoV-2","CGCCCCTACACAAAAA",6,1.13,NA,NA,NA,NA,NA,NA,"stop","P82* T100Y",2
"lib1","SARS-CoV-2","CGCCCCTGGTACAACG",1,21.54,6,-4.76,0.86,3,1.13,0.01,">1 nonsynonymous","R73I L95C E141R",3
"lib1","SARS-CoV-2","CGCCCGAATTAAGAGT",1,150.81,9.34,-1.43,0.07,2.67,1.1,0,">1 nonsynonymous","K87L Y121F E141N Y178A",4
"lib1","SARS-CoV-2","CGCCCGACCACTAAGC",4,34.99,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","S19F Y35N K87V T100P P149T",5
"lib1","SARS-CoV-2","CGCCCGACGTGTTCGG",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L G86A E186I",3
"lib1","SARS-CoV-2","CGCCCGAGAATAAGCG",3,23.35,10.68,-0.09,0.09,2.8,1.1,0,">1 nonsynonymous","L5Q E76D N109R E154S",4
"lib1","SARS-CoV-2","CGCCCGAGACGTCCAG",6,146.57,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","S43V Y93N S113L Q176Y",4
"lib1","SARS-CoV-2","CGCCCGAGTTCTTACA",19,195.74,8.97,-1.79,0.06,2.72,1.13,0,">1 nonsynonymous","G9I Y143V",2
"lib1","SARS-CoV-2","CGCCCGCCAAATTGCC",10,177.8,10.46,-0.31,0.04,2.93,1.03,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","CGCCCGCGATGCTTAG",1,5.6,9.96,-0.8,0.22,1.64,1.05,0.02,"1 nonsynonymous","W23S",1
"lib1","SARS-CoV-2","CGCCCTAAAGTTAGTA",4,74.67,10.83,0.07,0.09,2.88,1.06,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","CGCCCTAAGGCTAGTT",1,10.65,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N24G V71S Y143M",3
"lib1","SARS-CoV-2","CGCCCTAATTCTACAA",6,51.25,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48E N58C A67F I80R D97K",5
"lib1","SARS-CoV-2","CGCCCTCAACCTTTAT",5,29.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31Y S36P I88A",3
"lib1","SARS-CoV-2","CGCCCTCACGGACATA",10,1.3,NA,NA,NA,NA,NA,NA,"stop","D90F L122*",2
"lib1","SARS-CoV-2","CGCCCTCGCATATAAA",3,35.94,10.58,-0.18,0.04,2.96,1.02,0,">1 nonsynonymous","L5R D97F",2
"lib1","SARS-CoV-2","CGCCCTTCTGAGCCGG",2,123.78,10.64,-0.13,0.05,2.93,1.03,0,">1 nonsynonymous","S41L P197H",2
"lib1","SARS-CoV-2","CGCCGAAAAAATAGTA",11,158.35,9.86,-0.91,0.1,2.15,1.03,0,">1 nonsynonymous","N40A A105V Q163S",3
"lib1","SARS-CoV-2","CGCCGAATGAAACCAG",4,0.96,NA,NA,NA,NA,NA,NA,"stop","N4* V32L T85L N107C",4
"lib1","SARS-CoV-2","CGCCGACAAATCACAT",1,8.85,7.29,-3.47,0.59,1.73,1.05,0.07,">1 nonsynonymous","F44V T63A V71E",3
"lib1","SARS-CoV-2","CGCCGACAATGTTGCT",2,66.73,8.35,-2.41,0.12,2.97,1.05,0.01,">1 nonsynonymous","Y35W R73A S113C",3
"lib1","SARS-CoV-2","CGCCGACATACCCGGT",4,91.71,10.69,-0.07,0.06,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCGACCACCTTGAA",2,9.85,9.52,-1.24,0.2,1.79,1.1,0.02,">1 nonsynonymous","V77K P197E",2
"lib1","SARS-CoV-2","CGCCGACGAACATCCA",5,0.8,NA,NA,NA,NA,NA,NA,"stop","A33* N64A",2
"lib1","SARS-CoV-2","CGCCGAGCACATAGCG",7,1.28,NA,NA,NA,NA,NA,NA,"stop","L131* G146Y",2
"lib1","SARS-CoV-2","CGCCGATATTTTAAAA",2,81.84,10.7,-0.06,0.1,2.93,1.02,0,"1 nonsynonymous","S139A",1
"lib1","SARS-CoV-2","CGCCGATTACCGCGCA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","D34* Y121M",2
"lib1","SARS-CoV-2","CGCCGCATCTAAAGAC",8,53.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I88W A105M I142V",3
"lib1","SARS-CoV-2","CGCCGCCGCAACGGAG",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A A14M K48H K56E N64V Y91H L131I E154N",8
"lib1","SARS-CoV-2","CGCCGCTAAGAATCGT",2,20.9,10.09,-0.67,0.13,1.9,1.04,0.01,">1 nonsynonymous","V71M S129C",2
"lib1","SARS-CoV-2","CGCCGGAACTACCGGA",5,77.77,8.59,-2.18,0.15,1.5,1.16,0.01,">1 nonsynonymous","P7F F17T D97M",3
"lib1","SARS-CoV-2","CGCCGGCTTAAACTAT",10,115.35,10.2,-0.57,0.08,2.46,1,0,">1 nonsynonymous","T3K S36M R136I",3
"lib1","SARS-CoV-2","CGCCGGGCATTATGGG",5,69.63,7.42,-3.35,0.1,1.89,1.11,0,">1 nonsynonymous","S43L C150N",2
"lib1","SARS-CoV-2","CGCCGTAAGCTCTCTA",4,40.84,10.06,-0.71,0.12,2.37,1.06,0.01,">1 nonsynonymous","C102I G152M A190E",3
"lib1","SARS-CoV-2","CGCCGTATCGGCAACA",9,165.65,10.77,0,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCGTCCCCGGGCTT",4,43.4,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I28L F44C F70R Y119P",4
"lib1","SARS-CoV-2","CGCCGTTACTATACTA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","A33* C49D G86S W106Q S113L P149S G172I",7
"lib1","SARS-CoV-2","CGCCTAAACCGTCACA",1,20.83,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C102R T148S G155F H189R",4
"lib1","SARS-CoV-2","CGCCTAACAAAACAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37T S43I L57* V103N C150S",5
"lib1","SARS-CoV-2","CGCCTAACTGTGATAT",2,7.63,6.12,-4.64,2,3,1.06,0.01,">1 nonsynonymous","S36Y D112G P133V",3
"lib1","SARS-CoV-2","CGCCTACACATCAAAC",4,84.1,10.76,-0.01,0.08,2.91,1.06,0,"1 nonsynonymous","L162I",1
"lib1","SARS-CoV-2","CGCCTACGCTCATAAC",2,10.48,6,-4.76,0.9,3,1.29,0.01,">1 nonsynonymous","A14N K87R K94L D98T I142Q",5
"lib1","SARS-CoV-2","CGCCTACTATTCCACT",3,36.57,10.59,-0.18,0.06,2.93,1.03,0,">1 nonsynonymous","G9L Y39T",2
"lib1","SARS-CoV-2","CGCCTACTTAGCTTAT",6,25.86,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N1R F44S I88F V115L",4
"lib1","SARS-CoV-2","CGCCTAGCGATTGACC",9,123.38,9.81,-0.95,0.11,2.13,1.02,0,">1 nonsynonymous","F8A Y35M R136K",3
"lib1","SARS-CoV-2","CGCCTATAACACTATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7K",1
"lib1","SARS-CoV-2","CGCCTATCCTACTAAA",2,71.57,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","W23D S36L T55F Y119G",4
"lib1","SARS-CoV-2","CGCCTATCTAGTTTCC",4,44.79,8.75,-2.01,0.1,1.97,1.11,0,">1 nonsynonymous","P96E Y119S",2
"lib1","SARS-CoV-2","CGCCTATGAAGCACTA",3,32.58,10.67,-0.1,0.06,2.91,1.01,0,"1 nonsynonymous","K132Y",1
"lib1","SARS-CoV-2","CGCCTCAACTAACCGT",4,51.65,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","T100S A105E T148Y",3
"lib1","SARS-CoV-2","CGCCTCACAGCGCCGC",5,352.27,10.23,-0.54,0.04,2.92,1.02,0,">1 nonsynonymous","E10S G174K",2
"lib1","SARS-CoV-2","CGCCTCAGAAAGAACG",1,21.26,10.64,-0.12,0.06,2.97,1,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","CGCCTCAGCCAATCGA",3,25.84,8.52,-2.25,0.3,1.5,1.11,0.03,">1 nonsynonymous","T15V C31T R136S K198R",4
"lib1","SARS-CoV-2","CGCCTCATAAAGGAGC",15,4.72,NA,NA,NA,NA,NA,NA,"stop","R27* A42V S53Y G166S",4
"lib1","SARS-CoV-2","CGCCTCATTCGTTAGG",4,1.51,NA,NA,NA,NA,NA,NA,"stop","F17K G83V I104* K132G",4
"lib1","SARS-CoV-2","CGCCTCATTTAAAAAG",1,13.29,11.02,0.26,0.12,2.97,1.01,0.01,">1 nonsynonymous","V37L N64V",2
"lib1","SARS-CoV-2","CGCCTCGCGCTGTGAA",6,0.39,NA,NA,NA,NA,NA,NA,"stop","G9P L95S N107Q V115M L131R T140I V153L T201*",8
"lib1","SARS-CoV-2","CGCCTCTCATCTCGGC",4,40.25,8.5,-2.27,0.05,2.81,1.08,0,">1 nonsynonymous","V32T Y143S",2
"lib1","SARS-CoV-2","CGCCTCTGACAGAGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42W",1
"lib1","SARS-CoV-2","CGCCTGAAGCAATTTA",2,78.58,10.28,-0.49,0.06,2.69,1,0,">1 nonsynonymous","T3W I104C",2
"lib1","SARS-CoV-2","CGCCTGAATAATACCA",7,60.23,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P96I G155E",2
"lib1","SARS-CoV-2","CGCCTGACAAAACTCC",6,145.56,8.53,-2.24,0.12,2.11,1.11,0.01,">1 nonsynonymous","G51N P149L Q176L",3
"lib1","SARS-CoV-2","CGCCTGACGGAATCCC",4,70.98,10.76,-0.01,0.07,2.95,1.02,0,">1 nonsynonymous","L5S V11I V37Y",3
"lib1","SARS-CoV-2","CGCCTGAGTCATTCCG",6,123.85,9.81,-0.96,0.03,2.92,1.03,0,">1 nonsynonymous","K87Y Y159W",2
"lib1","SARS-CoV-2","CGCCTGCAACCTATAC",3,145.32,10.22,-0.54,0.02,2.93,1.03,0,">1 nonsynonymous","L122M K128P I142P",3
"lib1","SARS-CoV-2","CGCCTGCAAGGACTAG",32,384.36,10.12,-0.64,0.04,2.7,1.01,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","CGCCTGCTGTTATTCG",4,93.04,10.83,0.07,0.06,2.92,1.03,0,">1 nonsynonymous","A18P Y35W",2
"lib1","SARS-CoV-2","CGCCTGGGAAAAAGTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S43T L111*",2
"lib1","SARS-CoV-2","CGCCTGTGCCAAAGGC",4,38.04,10.59,-0.18,0.03,2.94,1.03,0,"1 nonsynonymous","E10G",1
"lib1","SARS-CoV-2","CGCCTTACCGAGGCGC",8,13.4,6.11,-4.66,0.71,3,1.12,0.01,">1 nonsynonymous","N4P R16Y C49P K56W I104Q L131M",6
"lib1","SARS-CoV-2","CGCCTTAGTAGCATTC",2,87.54,10.76,0,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCCTTAGTATAATAC",11,193.35,8.85,-1.92,0.16,1.51,1.13,0.01,">1 nonsynonymous","S36D R127T",2
"lib1","SARS-CoV-2","CGCCTTCAATGGATAA",1,14.32,7.72,-3.04,0.34,1.51,1.38,0.06,">1 nonsynonymous","S36E T46I R78H P82K",4
"lib1","SARS-CoV-2","CGCCTTGACCATTACC",2,98.15,10.67,-0.09,0.05,2.92,1.05,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","CGCCTTGATAAGTATA",5,70.69,10.66,-0.11,0.05,2.89,1.07,0,"1 nonsynonymous","D75Y",1
"lib1","SARS-CoV-2","CGCCTTGCTATCGGCA",2,21.71,6,-4.76,2,3,1.22,0,">1 nonsynonymous","Y35P V103S V115S Y123I Q144L",5
"lib1","SARS-CoV-2","CGCGAAAAAAGATTAA",3,52.18,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E76K F99S F167Q",3
"lib1","SARS-CoV-2","CGCGAAAAATAAACGC",5,152.16,10.79,0.03,0.07,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CGCGAAAACCGTAAAA",3,52.09,6.08,-4.69,0.91,1.5,1.16,0.02,">1 nonsynonymous","C61M R73M N130V T140L P177S",5
"lib1","SARS-CoV-2","CGCGAAAATACGAGTA",5,121.26,9.51,-1.26,0.1,2,1.11,0,">1 nonsynonymous","N58I Q144Y",2
"lib1","SARS-CoV-2","CGCGAAACCCAGGACC",3,9.13,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14D W106C Y119L K128S Y175W",5
"lib1","SARS-CoV-2","CGCGAACACATAGTGC",17,58.95,7.92,-2.85,0.39,1.5,1.18,0.05,">1 nonsynonymous","S19T A33D",2
"lib1","SARS-CoV-2","CGCGAACAGTCGAAAA",6,152.97,9.85,-0.92,0.04,2.91,1.03,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","CGCGAACCACTATAAC",2,0.2,NA,NA,NA,NA,NA,NA,"stop","L5* P54L P82K D98G S113G T140G T201R",7
"lib1","SARS-CoV-2","CGCGAAGAAAAATTAG",3,81.39,10.74,-0.03,0.03,2.97,1,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","CGCGAAGTATTACAAG",3,52.34,10.22,-0.54,0.06,2.86,1.04,0,">1 nonsynonymous","Y91M D97S",2
"lib1","SARS-CoV-2","CGCGAATATCCGTACT",3,19.64,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","Q84A L95W G101V F126S G166I",5
"lib1","SARS-CoV-2","CGCGAATCTCTAATAT",17,195.66,10.15,-0.62,0.05,2.82,1.04,0,">1 nonsynonymous","T3H D90Y N110E T148K",4
"lib1","SARS-CoV-2","CGCGAATTAAAGTGAT",5,30.74,8.14,-2.62,0.3,1.5,1.04,0.02,">1 nonsynonymous","Y35G I88M",2
"lib1","SARS-CoV-2","CGCGACAAAGTTTGAT",5,68.97,6.09,-4.67,0.6,1.5,1.14,0.01,">1 nonsynonymous","Y39R R73E V103L V115G L122A T148R",6
"lib1","SARS-CoV-2","CGCGACACTAACTATC",3,53.58,10.02,-0.74,0.11,2.07,1.02,0,">1 nonsynonymous","G51I S129R",2
"lib1","SARS-CoV-2","CGCGACATAAATATAC",1,16.59,10.5,-0.27,0.18,2.56,1.16,0.02,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","CGCGACCATAGCACAA",4,67.71,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D97I W106K V173T",3
"lib1","SARS-CoV-2","CGCGACGAACGCAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12I S41* C102R N120M P161L Q168L",6
"lib1","SARS-CoV-2","CGCGACGGCCAGCGGA",3,24.19,10.81,0.05,0.07,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CGCGACTCTTAAAGAA",1,17.01,9.58,-1.18,0.2,1.6,1.1,0.02,">1 nonsynonymous","T15S S19F",2
"lib1","SARS-CoV-2","CGCGACTGGTGTTCAA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N1P S19R G83L L95F N120* S139C F156S",7
"lib1","SARS-CoV-2","CGCGAGAAAAAATGAT",2,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T T15N F99D K132R",4
"lib1","SARS-CoV-2","CGCGAGAATCGAGGGT",1,37.56,6,-4.76,1.73,1.5,1.13,0.01,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","CGCGAGACGTACCAAT",5,49.81,10.82,0.06,0.06,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCGAGAGAATGAGTC",8,69.87,8.81,-1.95,0.12,1.84,1.12,0.01,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","CGCGAGGATAAGCAAG",3,0.42,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib1","SARS-CoV-2","CGCGAGGTAGGTTTGT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","K26F F44C D68N E135*",4
"lib1","SARS-CoV-2","CGCGAGGTTTGAGGAC",2,26.74,10.78,0.02,0.1,2.92,1.03,0.01,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","CGCGAGGTTTGTTATA",7,2.98,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","CGCGAGTCCTATACAC",2,120.27,10.71,-0.06,0.04,2.93,1.01,0,">1 nonsynonymous","C61H D90N",2
"lib1","SARS-CoV-2","CGCGAGTTAACTATAT",2,23.52,6,-4.76,2,3,1.04,0,">1 nonsynonymous","K87L L95T N157H G174T",4
"lib1","SARS-CoV-2","CGCGATAATAATCCTG",3,12.06,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4G C49N K87R A145P P149L",5
"lib1","SARS-CoV-2","CGCGATAGCAATCATA",1,6.29,6,-4.76,2,1.5,1.05,0.04,">1 nonsynonymous","Y50L G83Y N92V Y143H P149T C158Y",6
"lib1","SARS-CoV-2","CGCGATAGCCTTCTGG",3,32.73,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23K K114T G174N L188F",4
"lib1","SARS-CoV-2","CGCGATGCTGAACCAC",6,0.99,NA,NA,NA,NA,NA,NA,"stop","F99L G117T K128L T170* V173L",5
"lib1","SARS-CoV-2","CGCGATTAACTAATTG",2,8.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9T N13M F44N K132A F185Y S200R",6
"lib1","SARS-CoV-2","CGCGCAAAAATTTTGG",5,152.99,8.77,-1.99,0.11,2.04,1.11,0,"1 nonsynonymous","P177C",1
"lib1","SARS-CoV-2","CGCGCAACAGAATTAG",2,28.04,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","C6R F12V L125P R127V P149R",5
"lib1","SARS-CoV-2","CGCGCAACTAGTGGAC",13,202.17,10.09,-0.68,0.07,2.39,1.01,0,">1 nonsynonymous","P133M P149S",2
"lib1","SARS-CoV-2","CGCGCACAGCTAAACA",7,63.6,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T55M D90V C150R R179V",4
"lib1","SARS-CoV-2","CGCGCACGTCGATTTT",4,165.96,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","N24Y V52T D112Q Y143P E154L",5
"lib1","SARS-CoV-2","CGCGCAGAGTTCAACC",2,60.98,10.06,-0.71,0.1,2.49,1.06,0,">1 nonsynonymous","Y35E N58L",2
"lib1","SARS-CoV-2","CGCGCAGTTATCACAA",1,1.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CGCGCATATAACGCTT",5,12.93,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A33T L60Y S113K Y121N P149L",5
"lib1","SARS-CoV-2","CGCGCCCAATGTATTT",5,111.31,9.05,-1.72,0.13,1.78,1.13,0.01,">1 nonsynonymous","A42R K48T L95V N107R K128R",5
"lib1","SARS-CoV-2","CGCGCCCTAATGTATA",2,45.21,10.6,-0.17,0.05,2.97,1,0,">1 nonsynonymous","G83N E141L",2
"lib1","SARS-CoV-2","CGCGCCGTAATGTAAA",6,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100C Y165T",2
"lib1","SARS-CoV-2","CGCGCCTACTAAAGAC",11,180.67,10.82,0.06,0.06,2.93,1.04,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","CGCGCCTGACTTCCAA",8,25.24,8.29,-2.47,0.3,1.5,1,0.03,">1 nonsynonymous","P7F S41L N64Y D98L G174L",5
"lib1","SARS-CoV-2","CGCGCCTTTCCGTCAC",10,198.69,9.1,-1.66,0.04,2.77,1.07,0,">1 nonsynonymous","T85W Y119G",2
"lib1","SARS-CoV-2","CGCGCGACACGATACT",4,24.3,10.63,-0.13,0.08,2.97,1,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","CGCGCGGAGTAGGCGA",4,97.75,10.59,-0.18,0.03,2.89,1.04,0,">1 nonsynonymous","E10A K87R",2
"lib1","SARS-CoV-2","CGCGCTATAAGGTTAC",8,55.24,10.78,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","CGCGCTCCTTCAAAGC",8,49.08,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","F44L V103W",2
"lib1","SARS-CoV-2","CGCGCTCTTACATAAT",4,37.24,6,-4.76,1.19,1.5,1.16,0.01,">1 nonsynonymous","G9R N13F Y35W C150N",4
"lib1","SARS-CoV-2","CGCGCTGTCAATGTAG",4,71.12,10.27,-0.5,0.07,2.61,1,0,"1 nonsynonymous","E76S",1
"lib1","SARS-CoV-2","CGCGCTGTCTGAATTT",3,41.62,8.07,-2.69,0.29,1.5,1.04,0.04,">1 nonsynonymous","Y121A R127S",2
"lib1","SARS-CoV-2","CGCGCTTAGCGACAAT",4,52.69,8.54,-2.22,0.11,2.88,1.13,0,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","CGCGGAACAGCCTTCT",1,33.69,9.67,-1.09,0.07,2.79,1.1,0,">1 nonsynonymous","V37E G174V",2
"lib1","SARS-CoV-2","CGCGGAAGGGTCTAAA",9,4.95,NA,NA,NA,NA,NA,NA,"stop","R25Q Q79* L125N S139H F156*",5
"lib1","SARS-CoV-2","CGCGGACGCATAAAAA",5,40.68,8.67,-2.09,0.11,2.7,1.04,0.01,">1 nonsynonymous","C6P T170A",2
"lib1","SARS-CoV-2","CGCGGAGTAAACTGGA",6,9.56,6.47,-4.3,0.31,3,1.08,0.01,">1 nonsynonymous","N1L N13K C31A G83Y R127Q H189I",6
"lib1","SARS-CoV-2","CGCGGCAAATCGTGAC",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L E10I K94Y",3
"lib1","SARS-CoV-2","CGCGGCGTTACGTTAC",2,42.35,9.9,-0.87,0.05,2.68,1.07,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","CGCGGGCTCTACATAC",1,11.68,6.39,-4.38,0.57,3,1.24,0.03,">1 nonsynonymous","D34F T100M F126G V173G",4
"lib1","SARS-CoV-2","CGCGGGGAGATAAGGT",1,41.21,9.58,-1.19,0.09,2.85,1.05,0,">1 nonsynonymous","N120L P149M G174Q",3
"lib1","SARS-CoV-2","CGCGGTAATGCAATCC",3,44.15,10.35,-0.41,0.07,2.78,1.09,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","CGCGGTCAACTCCACT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","C49* N64I G155V",3
"lib1","SARS-CoV-2","CGCGGTCCAACGATCA",3,25.81,9.13,-1.63,0.27,1.5,1.07,0.04,">1 nonsynonymous","D90W W106I",2
"lib1","SARS-CoV-2","CGCGGTCGTGCATCGC",6,35.91,6,-4.76,0.92,1.5,1.12,0.01,">1 nonsynonymous","A89M N107L Y123K N151K",4
"lib1","SARS-CoV-2","CGCGGTTATAGAGGTG",1,30.84,10.67,-0.09,0.04,3,1,0,">1 nonsynonymous","A33C G51R",2
"lib1","SARS-CoV-2","CGCGTAACGCCTGGTC",7,72.83,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A18F F47K Q168L",3
"lib1","SARS-CoV-2","CGCGTAAGCCGACTAT",4,68.12,10.7,-0.06,0.04,2.87,1.03,0,">1 nonsynonymous","K128R E141S",2
"lib1","SARS-CoV-2","CGCGTAGCGCTGTACC",2,20.86,9.71,-1.06,0.11,1.92,1.07,0,">1 nonsynonymous","A18I S41W",2
"lib1","SARS-CoV-2","CGCGTATAAGCGCTTT",6,41.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P82S I138C A145E F167P",4
"lib1","SARS-CoV-2","CGCGTATATTGCCAAA",2,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63H N120T",2
"lib1","SARS-CoV-2","CGCGTCAGTCACAACG",2,95.64,10.74,-0.03,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCGTCATATTGCGGA",8,85.55,9.54,-1.22,0.1,2.81,1.12,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","CGCGTCCAAATCGAAG",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P C61Y Q84M P96V",4
"lib1","SARS-CoV-2","CGCGTCTGATCGGCTA",4,32.39,8.97,-1.8,0.34,1.5,1.05,0.06,">1 nonsynonymous","S41R L57H N110R E141G G152S P177W",6
"lib1","SARS-CoV-2","CGCGTGACTATGAGCA",10,34.28,6.85,-3.92,0.41,1.5,1.07,0.04,">1 nonsynonymous","D34Y G83F S129F G152L",4
"lib1","SARS-CoV-2","CGCGTGATGCAAAAAT",1,45.09,10.42,-0.34,0.08,2.88,1.06,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","CGCGTGCATTCAAAAC",1,24.27,6.1,-4.66,2,1.5,1.21,0.03,">1 nonsynonymous","F62D P82Y",2
"lib1","SARS-CoV-2","CGCGTGCGAGATATCA",4,98.24,9.93,-0.84,0.07,2.56,1.03,0,">1 nonsynonymous","Y35P E141L",2
"lib1","SARS-CoV-2","CGCGTTACATTATACA",3,40.92,6.99,-3.77,0.31,1.63,1.19,0.02,">1 nonsynonymous","N4V Y39W F134P",3
"lib1","SARS-CoV-2","CGCGTTCGTTTATCAT",1,45.5,6.84,-3.93,0.45,1.5,1.14,0.03,">1 nonsynonymous","R25L D34A T55N F99T T170S",5
"lib1","SARS-CoV-2","CGCGTTCTTTGTCCGC",9,36.62,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P82Y N130H T148R C158S F185C",5
"lib1","SARS-CoV-2","CGCGTTTAAGCAATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35S C61*",2
"lib1","SARS-CoV-2","CGCTAAACCCTTGACT",7,371.85,8.23,-2.53,0.15,1.94,1.08,0.01,">1 nonsynonymous","N4R C31I K114P",3
"lib1","SARS-CoV-2","CGCTAAAGACAAAAGG",3,1.14,NA,NA,NA,NA,NA,NA,"stop","F44* F99M P161I",3
"lib1","SARS-CoV-2","CGCTAAATGTCACACA",5,72.17,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V52D A67S N107K",3
"lib1","SARS-CoV-2","CGCTAAATGTGAGGCC",5,54.47,9.8,-0.96,0.11,1.89,1.07,0.01,"1 nonsynonymous","A67G",1
"lib1","SARS-CoV-2","CGCTAACAGAACCGAG",5,151.27,10.71,-0.06,0.08,2.82,1.06,0,">1 nonsynonymous","I2S K56V",2
"lib1","SARS-CoV-2","CGCTAACAGTTGCGTT",7,164.9,10.54,-0.23,0.03,2.88,1.04,0,">1 nonsynonymous","T55L Y178T",2
"lib1","SARS-CoV-2","CGCTAACATTATAAAA",2,9.7,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","CGCTAACCCACACTCA",8,299.02,9.24,-1.53,0.06,2.84,1.12,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","CGCTAACCCTAAATGT",1,49.81,6.84,-3.92,0.54,1.5,1.16,0.05,">1 nonsynonymous","G155V F167W",2
"lib1","SARS-CoV-2","CGCTAACCTCTTCATT",2,0.34,NA,NA,NA,NA,NA,NA,"stop","N4* N58K A81T Q84*",4
"lib1","SARS-CoV-2","CGCTAACGAAGCATTA",5,0.3,NA,NA,NA,NA,NA,NA,"stop","I88Q R124* C150L",3
"lib1","SARS-CoV-2","CGCTAACTATGGTTTG",1,63.7,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N1R F62T G172T",3
"lib1","SARS-CoV-2","CGCTAAGATAGTAAAA",2,5.94,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","N4S Y123C F134D L187R G196Y",5
"lib1","SARS-CoV-2","CGCTAAGATCGCTGAC",1,6.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F99Q I104S Q168M",3
"lib1","SARS-CoV-2","CGCTAATAGAAGGTGG",1,28.98,10.38,-0.38,0.08,2.95,1.06,0,">1 nonsynonymous","Q84M P169V",2
"lib1","SARS-CoV-2","CGCTAATATATCTGAG",6,47.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67T F160Y Y165T",3
"lib1","SARS-CoV-2","CGCTAATATATGTCCC",7,143.43,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31Q L60E G117S S139G Y175H",5
"lib1","SARS-CoV-2","CGCTAATCATATCACA",4,28.74,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F17V E141N V180K",3
"lib1","SARS-CoV-2","CGCTAATCCAATGATC",2,0,NA,NA,NA,NA,NA,NA,"stop","S41L K48L P149Y Y175*",4
"lib1","SARS-CoV-2","CGCTAATGGCTCATTG",9,8.19,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib1","SARS-CoV-2","CGCTACAAGACAACTG",7,2.47,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","CGCTACACAAAACACG",5,46.18,10.04,-0.72,0.11,2.66,1.03,0.01,">1 nonsynonymous","S43L L57R",2
"lib1","SARS-CoV-2","CGCTACACACCAACTA",1,9.9,9.26,-1.5,0.22,2.42,1.06,0.01,">1 nonsynonymous","S45L D59R A105W S147T F156L",5
"lib1","SARS-CoV-2","CGCTACAGTGAATCAC",7,66.97,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","V77E P161C V173E",3
"lib1","SARS-CoV-2","CGCTACCAAGTACCAT",5,123.96,9.12,-1.65,0.05,2.91,1.05,0,">1 nonsynonymous","G83M Q168D",2
"lib1","SARS-CoV-2","CGCTACCTTAACCGCC",5,55.89,6,-4.76,1.87,1.5,1.29,0.03,">1 nonsynonymous","D75R P82R",2
"lib1","SARS-CoV-2","CGCTACGATCTTAGAA",4,58.78,10.74,-0.02,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGCTACGTTAATGCAA",9,119.55,10.75,-0.02,0.08,2.88,1.08,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","CGCTACTAAGTAACCG",6,105.6,8.68,-2.08,0.09,2.71,1.11,0,">1 nonsynonymous","F62T D90H G166R",3
"lib1","SARS-CoV-2","CGCTACTATGTATGTT",1,1.34,NA,NA,NA,NA,NA,NA,"stop","F12V V37* S43V N64P R136P L183D",6
"lib1","SARS-CoV-2","CGCTAGAAGGAACTGC",7,1.51,NA,NA,NA,NA,NA,NA,"stop","P149Q N157Y G166*",3
"lib1","SARS-CoV-2","CGCTAGAAGTTCCCGT",3,55.29,6.36,-4.4,0.56,1.5,1.18,0.02,">1 nonsynonymous","N40G F156L V180F",3
"lib1","SARS-CoV-2","CGCTAGGAATATATAC",1,40.62,10.57,-0.2,0.06,2.86,1,0,">1 nonsynonymous","L5D S184E",2
"lib1","SARS-CoV-2","CGCTAGGAATTCACTT",6,22.37,7.74,-3.02,0.32,1.64,1.13,0.06,">1 nonsynonymous","L5F V20G A33I I138K K198S",5
"lib1","SARS-CoV-2","CGCTAGGTAAAAAAGG",14,123.85,10.61,-0.15,0.05,2.9,1.05,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","CGCTAGGTACCTATAC",3,16.86,10.11,-0.65,0.21,1.82,1.06,0.03,">1 nonsynonymous","Y50F W106S",2
"lib1","SARS-CoV-2","CGCTAGGTAGTGCACC",12,1.56,NA,NA,NA,NA,NA,NA,"stop","S69* G83L W106T N118I",4
"lib1","SARS-CoV-2","CGCTATAAGACAGAAG",10,79.35,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y91G A105I S200L",3
"lib1","SARS-CoV-2","CGCTATAAGCAAGCAT",9,99.95,9.33,-1.43,0.17,1.63,1.15,0.01,">1 nonsynonymous","A14F L122G E141L",3
"lib1","SARS-CoV-2","CGCTATACAAAGGAGT",7,96.86,10.81,0.05,0.06,2.94,1.01,0,"1 nonsynonymous","D97M",1
"lib1","SARS-CoV-2","CGCTATACAGAATCTG",1,26.79,10.62,-0.15,0.1,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CGCTATACTTCTATCA",3,25.06,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y21K V173K R179V",3
"lib1","SARS-CoV-2","CGCTATAGGTACTCCA",2,18.78,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V37W P82L A89D G155R",4
"lib1","SARS-CoV-2","CGCTATATATTCAAGG",2,35.87,10.35,-0.42,0.09,2.72,1.07,0.01,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","CGCTATTACTACTAAG",11,22.24,NA,NA,NA,NA,NA,NA,"stop","P177E T201*",2
"lib1","SARS-CoV-2","CGCTATTGAACGGTCG",2,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I A89L D98I F134L V181R",5
"lib1","SARS-CoV-2","CGCTATTTCCCTGATT",1,12.09,10.51,-0.26,0.19,2.92,1.12,0.02,">1 nonsynonymous","T55D G83Y",2
"lib1","SARS-CoV-2","CGCTCAAAATAGATGT",2,15.03,9.61,-1.16,0.2,1.94,1.03,0.02,">1 nonsynonymous","P7T V11R F62I",3
"lib1","SARS-CoV-2","CGCTCAATTAAGTCCA",2,5.96,9.85,-0.91,0.22,2.12,1.12,0.02,">1 nonsynonymous","T3M S36L K56W",3
"lib1","SARS-CoV-2","CGCTCAATTTCATCCA",2,23.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S36L V65L I88Y W106A",4
"lib1","SARS-CoV-2","CGCTCACACGTGTGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100G I138V",2
"lib1","SARS-CoV-2","CGCTCACAGTACGTAG",15,6.67,NA,NA,NA,NA,NA,NA,"stop","E10* Y178A K199N",3
"lib1","SARS-CoV-2","CGCTCACCAGTGAGAT",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q T201D",2
"lib1","SARS-CoV-2","CGCTCAGCAACCACAA",3,27.39,10.67,-0.1,0.03,2.95,1.05,0,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","CGCTCAGCAGAGAGCA",3,33.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D90T C102T",2
"lib1","SARS-CoV-2","CGCTCATAACACTTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R K128E L131C",3
"lib1","SARS-CoV-2","CGCTCATATAATCGCA",1,16.43,8.21,-2.55,0.14,2.46,1.05,0,">1 nonsynonymous","L57V K87A N118T",3
"lib1","SARS-CoV-2","CGCTCATCAAATAAGA",1,19.7,10.54,-0.23,0.11,2.97,1.05,0.01,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","CGCTCATTCGAAGGAA",3,44.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D N64T T85S F99D P133C G155H F167K",7
"lib1","SARS-CoV-2","CGCTCCAAATCCATAC",3,28.45,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","K48G L60F G146E N151S G152A",5
"lib1","SARS-CoV-2","CGCTCCACATCAAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q F44S G101N",3
"lib1","SARS-CoV-2","CGCTCCCACAACCACA",1,20.16,6.04,-4.72,1.08,1.5,1.24,0.03,">1 nonsynonymous","L5K T55N D97R P161I",4
"lib1","SARS-CoV-2","CGCTCCCACCCCTACT",2,150.97,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N24P K128M Q176T",3
"lib1","SARS-CoV-2","CGCTCCCTGCTCAAAA",4,19.72,9.65,-1.11,0.12,1.94,1.14,0.01,">1 nonsynonymous","L5K Y21N A33I K56V",4
"lib1","SARS-CoV-2","CGCTCCGCATGGCAGC",7,113.52,10.09,-0.67,0.07,2.62,1.02,0,">1 nonsynonymous","Y39S C61M Y91N",3
"lib1","SARS-CoV-2","CGCTCCGCTAGAATTG",3,33.73,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P96L Y143Q",2
"lib1","SARS-CoV-2","CGCTCCGTATACGTAA",3,72.9,8.77,-1.99,0.11,2.65,1.12,0,">1 nonsynonymous","S43N N118L Q163S",3
"lib1","SARS-CoV-2","CGCTCGAACTCTGTAA",1,16.3,6,-4.76,1.46,3,1.08,0,">1 nonsynonymous","L95T Q176P V180S",3
"lib1","SARS-CoV-2","CGCTCGATAATTGATA",2,14.02,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","L95R C150Y",2
"lib1","SARS-CoV-2","CGCTCGCGACTGCGGC",1,41.22,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","CGCTCGCTGACGAAAT",1,7.9,6,-4.76,2,3,1.06,0,">1 nonsynonymous","F17S S43R G86M L95G N118E G174V",6
"lib1","SARS-CoV-2","CGCTCGGACCGAGCGG",2,52.12,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L5F I28D G51T F62T",4
"lib1","SARS-CoV-2","CGCTCGTAAAGTATTG",3,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L G86T L95A H189Q",4
"lib1","SARS-CoV-2","CGCTCTAATACTCATG",3,49.81,10.13,-0.63,0.07,2.88,1,0,">1 nonsynonymous","N13L K87T",2
"lib1","SARS-CoV-2","CGCTCTACATCGAATC",1,22.97,7.35,-3.41,0.32,1.5,1.04,0.04,">1 nonsynonymous","F17V Y50N I142D",3
"lib1","SARS-CoV-2","CGCTCTAGAAGAAACC",2,7.68,8.31,-2.45,0.2,2.08,1.19,0.01,">1 nonsynonymous","D97S Y121H G155L",3
"lib1","SARS-CoV-2","CGCTCTAGATGATACA",2,15.85,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","N30W V103L",2
"lib1","SARS-CoV-2","CGCTCTCAAGCCCAAC",7,64.86,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V115M F126S Y143K P197R",4
"lib1","SARS-CoV-2","CGCTCTCACAATTGGG",6,7.92,7.5,-3.27,0.41,1.5,1.02,0.07,">1 nonsynonymous","A14G F99D",2
"lib1","SARS-CoV-2","CGCTCTCATAAAAAAG",1,46.41,10.71,-0.05,0.06,2.85,1.06,0,">1 nonsynonymous","D98G A190T",2
"lib1","SARS-CoV-2","CGCTCTCCTAAGTCGG",1,52.08,10.82,0.05,0.06,2.87,1.02,0,"1 nonsynonymous","S29R",1
"lib1","SARS-CoV-2","CGCTCTGTGCGTTGAA",2,44.62,6,-4.76,2,3,1.21,0,">1 nonsynonymous","V37W L122T C158R Q176L",4
"lib1","SARS-CoV-2","CGCTCTTCAAACGACG",1,16.01,10.66,-0.1,0.13,2.89,1.02,0.01,">1 nonsynonymous","N120F K128E T140N",3
"lib1","SARS-CoV-2","CGCTCTTCACCAAACT",1,2.39,NA,NA,NA,NA,NA,NA,"stop","N4* D59A",2
"lib1","SARS-CoV-2","CGCTCTTGAACTAAGT",1,11.65,9.94,-0.83,0.17,2.85,1.05,0.01,">1 nonsynonymous","A33P T55L D90T",3
"lib1","SARS-CoV-2","CGCTCTTTAATGGTGA",2,12.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T3I D90N Y119T E141R C150P T170A",6
"lib1","SARS-CoV-2","CGCTGAAACAAAGTCC",2,25,9.99,-0.77,0.09,2.85,1.03,0.01,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","CGCTGAAACGTGAGGA",2,24.19,10.14,-0.63,0.08,2.86,1.08,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","CGCTGAACAAGACAAG",1,40.75,10.18,-0.59,0.11,2.19,1,0,">1 nonsynonymous","Y35N K56N D97L K132T S139T T201N",6
"lib1","SARS-CoV-2","CGCTGAACCAAGATTC",3,0.93,NA,NA,NA,NA,NA,NA,"stop","E141I E154* S184C",3
"lib1","SARS-CoV-2","CGCTGACCAAGTATTT",1,30.36,10.62,-0.15,0.09,2.87,1.11,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CGCTGACTATAGGTTT",1,42.65,7.89,-2.88,0.29,1.56,1.27,0.03,">1 nonsynonymous","N13C S41M K56F D97N F156W",5
"lib1","SARS-CoV-2","CGCTGACTATGCTATA",1,8.94,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","W23V F44Y N64D N92V V103G F167S",6
"lib1","SARS-CoV-2","CGCTGACTCTGACTCT",1,33.69,6,-4.76,2,3,1.11,0,">1 nonsynonymous","V11F S19M L57D N92Y S113R",5
"lib1","SARS-CoV-2","CGCTGACTTCTAAAAC",2,8.92,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T3L F12E T100H W106R G117Y",5
"lib1","SARS-CoV-2","CGCTGAGAGAATAAAC",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Y K199L",2
"lib1","SARS-CoV-2","CGCTGAGTCCTCGCAA",8,40.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L60Y T85C F99A N110I",4
"lib1","SARS-CoV-2","CGCTGATAACCTTAAT",5,1.59,NA,NA,NA,NA,NA,NA,"stop","S45H I104F G116* L122A L131V F160A",6
"lib1","SARS-CoV-2","CGCTGATACATCGAGG",4,44.77,9.97,-0.79,0.19,1.84,1.07,0.02,">1 nonsynonymous","P7I G83D D97M",3
"lib1","SARS-CoV-2","CGCTGATACTAGACTT",2,0.43,NA,NA,NA,NA,NA,NA,"stop","T3* G51H G116S",3
"lib1","SARS-CoV-2","CGCTGCCAAAAATGAG",2,44.78,8.62,-2.15,0.13,2.42,1.13,0.01,">1 nonsynonymous","T15S F44D P149L Q168V K199M",5
"lib1","SARS-CoV-2","CGCTGCTAATTGATAA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","C49* D137K",2
"lib1","SARS-CoV-2","CGCTGGATGTAGATCA",6,78.17,8.85,-1.91,0.1,2.74,1.14,0,">1 nonsynonymous","V32T Q84H Y119M",3
"lib1","SARS-CoV-2","CGCTGGCATAATTTAC",2,54.02,10.21,-0.56,0.04,2.89,1.04,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","CGCTGGGAAGCGTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45* N64Q",2
"lib1","SARS-CoV-2","CGCTGTAAGATACAGC",3,6.98,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N13C R27M N40W G83D Y143I C150W",6
"lib1","SARS-CoV-2","CGCTGTCAAACGACAC",2,20.05,10.77,0.01,0.09,2.88,1.07,0,">1 nonsynonymous","A14Y L122K N171Y H189N",4
"lib1","SARS-CoV-2","CGCTGTGAACCTCGTG",4,29.94,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L5Q W23C N92V W106G G116T Q168L",6
"lib1","SARS-CoV-2","CGCTGTGTAACAGAAA",6,9.77,9.3,-1.46,0.4,1.53,1,0.06,">1 nonsynonymous","P7L F12A V32I D34L I138M K198W",6
"lib1","SARS-CoV-2","CGCTGTTCTATGGACC",1,29.8,10.71,-0.06,0.09,2.85,1.12,0,"1 nonsynonymous","I2M",1
"lib1","SARS-CoV-2","CGCTTAAATAAAATAA",5,128.23,10.5,-0.27,0.06,2.9,1.05,0,"1 nonsynonymous","K87W",1
"lib1","SARS-CoV-2","CGCTTAAGAATCCGCG",1,1.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36C",1
"lib1","SARS-CoV-2","CGCTTAAGCATCAATC",1,51.93,10.72,-0.05,0.05,2.95,1.02,0,"1 nonsynonymous","K114I",1
"lib1","SARS-CoV-2","CGCTTAATTAGAACCA",6,0.47,NA,NA,NA,NA,NA,NA,"stop","Y143* Q176S E186W",3
"lib1","SARS-CoV-2","CGCTTACGTGGAAAAT",11,10.33,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A42L G83P F99V",3
"lib1","SARS-CoV-2","CGCTTACTTGAAAACC",2,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63A D98Y C102L Y119L I142C F156D",6
"lib1","SARS-CoV-2","CGCTTACTTGCGAGAT",9,24.06,6.56,-4.2,0.28,1.5,1.08,0.02,">1 nonsynonymous","T3L N107Y",2
"lib1","SARS-CoV-2","CGCTTAGACACCAAGT",2,20.85,10.66,-0.11,0.07,2.98,1,0,">1 nonsynonymous","A42T L188P",2
"lib1","SARS-CoV-2","CGCTTAGCCCAGTCGC",9,29.75,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","T100D D137W C158R",3
"lib1","SARS-CoV-2","CGCTTATAATCCTATA",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y S41V D90I D98V",4
"lib1","SARS-CoV-2","CGCTTATCTCACAGCG",3,102.42,10.47,-0.29,0.05,2.8,1.03,0,">1 nonsynonymous","E10N T55Y D90Q",3
"lib1","SARS-CoV-2","CGCTTATTTAAGGAAC",5,10.61,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","A42M I104D",2
"lib1","SARS-CoV-2","CGCTTATTTTTCATGA",15,199.37,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P82A N118E D137S N171D Q176W T201L",6
"lib1","SARS-CoV-2","CGCTTCAAAAGATCGA",2,61.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S V32I L60S V77R P169Q",5
"lib1","SARS-CoV-2","CGCTTCAACGATGCTA",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S F99D F134H C158I",4
"lib1","SARS-CoV-2","CGCTTCAAGCAGTCTG",2,8.45,9.98,-0.78,0.11,2.05,1.02,0.01,">1 nonsynonymous","A14D W106S",2
"lib1","SARS-CoV-2","CGCTTCCAACATACAT",3,63.99,10.68,-0.09,0.04,2.95,1,0,">1 nonsynonymous","T100M N171S S200P",3
"lib1","SARS-CoV-2","CGCTTCCACAAGAGAG",5,1.63,NA,NA,NA,NA,NA,NA,"stop","Y50S T148* G172M",3
"lib1","SARS-CoV-2","CGCTTCCCACGTCTGC",1,12.8,10.63,-0.13,0.14,2.95,1,0.01,">1 nonsynonymous","L5H S113A",2
"lib1","SARS-CoV-2","CGCTTCTAAAAAAAAC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","D68M R127*",2
"lib1","SARS-CoV-2","CGCTTCTTTTAATACC",3,7.62,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N4L R25A S41F C61N N109E L122T P133C G174Y",8
"lib1","SARS-CoV-2","CGCTTGAAGGAGCTCA",2,11.74,8.54,-2.23,0.18,1.53,1.16,0.02,">1 nonsynonymous","C49F L111R P149L",3
"lib1","SARS-CoV-2","CGCTTGAATAGATATT",3,46.33,10.77,0.01,0.04,2.93,1.03,0,">1 nonsynonymous","K114W T140N",2
"lib1","SARS-CoV-2","CGCTTGCATTAATTAG",2,11.98,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","V180G",1
"lib1","SARS-CoV-2","CGCTTGCCAATTTAGT",2,59.69,10.14,-0.63,0.12,2.34,1.01,0.01,">1 nonsynonymous","F12L A105Y",2
"lib1","SARS-CoV-2","CGCTTGCTTCCGTAAT",3,31.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S69R N92G N120S",3
"lib1","SARS-CoV-2","CGCTTGGAAGCAAGAC",3,13.75,8.02,-2.74,0.23,2.19,1.1,0.02,">1 nonsynonymous","K56S S113M L122E G152S N171F",5
"lib1","SARS-CoV-2","CGCTTGTATTACCATT",4,70.15,9.67,-1.09,0.05,2.92,1.02,0,">1 nonsynonymous","G51N Y119S P197L",3
"lib1","SARS-CoV-2","CGCTTGTGATATAGCA",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V D90S N107V H189P",4
"lib1","SARS-CoV-2","CGCTTTAAAGTACTAC",2,0.39,NA,NA,NA,NA,NA,NA,"stop","P96* T170N",2
"lib1","SARS-CoV-2","CGCTTTAACCAAAGAA",1,54.42,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","F8V G86D S113L Y143C",4
"lib1","SARS-CoV-2","CGCTTTAACCCAGCGG",13,3.12,NA,NA,NA,NA,NA,NA,"stop","N120R G166N G174A S200*",4
"lib1","SARS-CoV-2","CGCTTTACACGAGTTC",4,6.55,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","G83W K94E G117A P197V",4
"lib1","SARS-CoV-2","CGCTTTAGATATGGCA",1,51.37,9.27,-1.49,0.34,1.5,1.01,0.06,">1 nonsynonymous","P82A P96W T170Q",3
"lib1","SARS-CoV-2","CGCTTTAGCAGGAAAT",2,9.4,9.08,-1.68,0.28,1.61,1.14,0.04,"1 nonsynonymous","K94P",1
"lib1","SARS-CoV-2","CGCTTTAGGTACGATA",4,54.86,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","V11F N40T S113I P149S",4
"lib1","SARS-CoV-2","CGCTTTAGTTTAGAAC",3,17.02,6.24,-4.53,1.01,1.5,1.16,0.05,">1 nonsynonymous","A14F S45T K87H K132I S139L P197T",6
"lib1","SARS-CoV-2","CGCTTTATATCGAGCG",7,124.03,10.08,-0.68,0.05,2.86,1,0,"1 nonsynonymous","N107Q",1
"lib1","SARS-CoV-2","CGCTTTATCACTAAGG",5,24.11,6.15,-4.61,0.51,1.5,1.12,0.01,">1 nonsynonymous","W23E I88K",2
"lib1","SARS-CoV-2","CGCTTTCAATAACCCT",1,8.15,10.85,0.08,0.11,2.78,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGCTTTCTGGAAACTC",4,17,8.91,-1.85,0.38,1.5,1.13,0.07,">1 nonsynonymous","R25F F134K",2
"lib1","SARS-CoV-2","CGCTTTTCAAACAGTT",1,10.69,8.6,-2.16,0.39,1.59,1.12,0.07,">1 nonsynonymous","K56Q D68S L125I P149R",4
"lib1","SARS-CoV-2","CGCTTTTCGTTGAGCA",2,43.02,10.57,-0.2,0.09,2.9,1.01,0,">1 nonsynonymous","N30A A42T",2
"lib1","SARS-CoV-2","CGCTTTTGATCATTAC",1,27.09,10.16,-0.6,0.19,2.74,1,0.02,">1 nonsynonymous","Y35G G116T",2
"lib1","SARS-CoV-2","CGCTTTTTTCTGGTTA",4,19.31,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","C6F Y35P C49Y N58R L122V K128T",6
"lib1","SARS-CoV-2","CGGAAAAAAGTCTTTT",2,44.99,10.39,-0.37,0.06,2.85,1.03,0,">1 nonsynonymous","D90R G116S",2
"lib1","SARS-CoV-2","CGGAAAAAATTACCCG",3,0,NA,NA,NA,NA,NA,NA,"stop","A33K G86K A105G P161*",4
"lib1","SARS-CoV-2","CGGAAAAAGATATAGT",3,22.74,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44Y N92V",2
"lib1","SARS-CoV-2","CGGAAAAAGTTCCTAC",1,2.5,NA,NA,NA,NA,NA,NA,"stop","S36V N157P K198*",3
"lib1","SARS-CoV-2","CGGAAAAATGAATATA",2,23.75,10.53,-0.23,0.1,2.88,1.11,0.01,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","CGGAAAAATTTCTAGA",12,104.35,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9I K87T D98R Y121E C150S L188P",6
"lib1","SARS-CoV-2","CGGAAAAGACAATCAT",5,2.81,NA,NA,NA,NA,NA,NA,"stop","Y121N L131* G196P",3
"lib1","SARS-CoV-2","CGGAAAAGTATTGCTA",2,16.32,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N92P V103C P197N",3
"lib1","SARS-CoV-2","CGGAAAAGTCGACATT",1,7.85,8.42,-2.34,0.43,1.5,1,0.06,">1 nonsynonymous","F8C T63C E141V",3
"lib1","SARS-CoV-2","CGGAAAAGTTTAGGTA",4,70.99,7.18,-3.58,0.25,1.7,1.24,0.02,"1 nonsynonymous","C150P",1
"lib1","SARS-CoV-2","CGGAAAATGATGGATA",4,119.14,6,-4.76,1.03,1.5,1.14,0.02,">1 nonsynonymous","C6K S108F Q176R T201Q",4
"lib1","SARS-CoV-2","CGGAAACAACCGGTCT",6,51,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V11S V52S Y119P",3
"lib1","SARS-CoV-2","CGGAAACCCCTACTAA",7,54.09,7.92,-2.84,0.29,1.5,1.08,0.03,">1 nonsynonymous","K48R Y91N Y165L",3
"lib1","SARS-CoV-2","CGGAAACGTTGATAAA",2,10.37,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S29L P82L K87S C158L",4
"lib1","SARS-CoV-2","CGGAAACGTTTAAATT",5,42.96,9.57,-1.19,0.13,2.01,1.11,0.01,">1 nonsynonymous","L5W C61D F134I",3
"lib1","SARS-CoV-2","CGGAAAGAAAAGTTGG",5,114.19,10.75,-0.01,0.06,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGAAAGATATATAAT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128W E135I F156H",3
"lib1","SARS-CoV-2","CGGAAATATAACTTAT",3,47,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A18T R25F F62T Y123P Y178D",5
"lib1","SARS-CoV-2","CGGAAATATCAGCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7N K56* T63S I80E N107* K132T Q168R",7
"lib1","SARS-CoV-2","CGGAAATCCTATTTAA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","V52D C102*",2
"lib1","SARS-CoV-2","CGGAAATTAAGCATTA",2,5.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43Y C61Q Y123S P161F T170A T201K",6
"lib1","SARS-CoV-2","CGGAAATTCCATGGCG",3,40.93,9.71,-1.06,0.06,2.8,1.07,0,">1 nonsynonymous","D90L T170A",2
"lib1","SARS-CoV-2","CGGAAATTGCCCGTAT",8,57.78,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35G F99D E154Y T201S",4
"lib1","SARS-CoV-2","CGGAACAAAAAACTCC",2,19.6,10.44,-0.32,0.09,2.88,1.13,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","CGGAACAAAACAAATG",8,283.04,6.04,-4.72,0.58,1.5,1.12,0.01,">1 nonsynonymous","V103T R127S F156T T201W",4
"lib1","SARS-CoV-2","CGGAACAAGTCAAAAA",2,31.3,10.73,-0.04,0.05,2.95,1.02,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CGGAACACAGCACTTT",2,20.26,6,-4.76,2,1.5,1.31,0.04,"1 nonsynonymous","V20K",1
"lib1","SARS-CoV-2","CGGAACACGAATTAAA",1,6.55,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F12D V37C T170C",3
"lib1","SARS-CoV-2","CGGAACAGTAACCGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","CGGAACATGAAGCGTC",3,4.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","CGGAACATGTCTAATG",5,61.09,9.88,-0.88,0.07,2.32,1.03,0,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","CGGAACATTAAAACTT",4,90.3,10.63,-0.14,0.03,2.89,1.02,0,">1 nonsynonymous","A22N K56N L60E T148A",4
"lib1","SARS-CoV-2","CGGAACATTTCTACTT",4,36.23,9.2,-1.57,0.17,1.71,1.19,0.01,">1 nonsynonymous","V37Y W106Q G116L",3
"lib1","SARS-CoV-2","CGGAACCACGATGTAC",3,22.14,9.12,-1.65,0.15,2.56,1.18,0.01,">1 nonsynonymous","T55M T85I N118M",3
"lib1","SARS-CoV-2","CGGAACCAGTTGTACA",2,61.47,9.56,-1.2,0.06,2.48,1.09,0,">1 nonsynonymous","G51T G174R",2
"lib1","SARS-CoV-2","CGGAACCGGCATAGTC",1,7.5,8.41,-2.36,0.42,1.66,1.17,0.07,">1 nonsynonymous","C6N G146K",2
"lib1","SARS-CoV-2","CGGAACGCTACGTACA",1,14.8,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","Y91S G101T",2
"lib1","SARS-CoV-2","CGGAACGTACGCGAAG",1,22.78,10.74,-0.02,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGAACGTTTCGAACG",3,15.37,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V65F Y66V Y93I V103H T140W",5
"lib1","SARS-CoV-2","CGGAACTATAAGTTTA",1,9.96,10.15,-0.61,0.08,3,1,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","CGGAACTATCAAGTTA",1,9.43,8.67,-2.09,0.34,1.96,1.14,0.04,">1 nonsynonymous","T15E C49V C195N",3
"lib1","SARS-CoV-2","CGGAAGAACGTTATTT",4,119.05,9.83,-0.94,0.06,2.77,1.08,0,">1 nonsynonymous","G74R V173I",2
"lib1","SARS-CoV-2","CGGAAGAAGACTAATA",5,110.35,10.89,0.12,0.07,2.91,1,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","CGGAAGACAATCTTAC",1,14.63,10.42,-0.35,0.08,2.79,1,0,">1 nonsynonymous","S29G K128C",2
"lib1","SARS-CoV-2","CGGAAGCAATATTACT",2,62.46,9.79,-0.98,0.14,2.03,1.13,0.01,">1 nonsynonymous","C61S F134E S164F T201G",4
"lib1","SARS-CoV-2","CGGAAGCCAGAATGGG",2,8.63,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I88V D98T T140F P161Q",4
"lib1","SARS-CoV-2","CGGAAGCTAGGATTAG",1,19.35,10.59,-0.17,0.09,2.86,1.06,0,">1 nonsynonymous","K48S V153L",2
"lib1","SARS-CoV-2","CGGAAGGAGTTTAATA",14,46.67,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T3V C61L S108P G155P T201R",5
"lib1","SARS-CoV-2","CGGAAGGCACTCAGAT",1,3.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","CGGAAGGTTAGAAGAA",2,27,10.13,-0.63,0.12,2.44,1.1,0.01,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","CGGAAGTAGGAAGGAG",7,27.15,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N1A G83V C150F",3
"lib1","SARS-CoV-2","CGGAAGTCCATTAGAA",3,41.2,10.81,0.04,0.07,2.93,1.03,0,"1 nonsynonymous","T3K",1
"lib1","SARS-CoV-2","CGGAAGTTGGCAAAAA",6,28.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6A Y35D G51I Q144T T201M",5
"lib1","SARS-CoV-2","CGGAATAAGAGCTCCT",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y93N K199G",3
"lib1","SARS-CoV-2","CGGAATAGGCATTCAT",9,28.86,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N1Y I88K Q144W Y165S",4
"lib1","SARS-CoV-2","CGGAATATAATTCTGG",3,0,NA,NA,NA,NA,NA,NA,"stop","S19* S41G D97L C102Y",4
"lib1","SARS-CoV-2","CGGAATATACTAGAAG",7,25.62,6.18,-4.58,0.74,1.5,1.24,0.02,">1 nonsynonymous","N13L G51E Q84Y N107W K128E",5
"lib1","SARS-CoV-2","CGGAATATAGTTCTCT",7,14.51,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","I2W V103G E135S P161L",4
"lib1","SARS-CoV-2","CGGAATATATGAAACT",4,1.58,NA,NA,NA,NA,NA,NA,"stop","L5M F12* I104A N130K T140A P149M",6
"lib1","SARS-CoV-2","CGGAATCAAAGAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5H G83R A89V P133D P149R V153*",6
"lib1","SARS-CoV-2","CGGAATCACGACTTGG",1,7.02,9.96,-0.81,0.18,2.89,1.02,0.01,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CGGAATCAGAGTATTG",1,11.8,7.09,-3.67,0.4,1.5,1.18,0.03,">1 nonsynonymous","P7S S19L C61Q W106R K128N",5
"lib1","SARS-CoV-2","CGGAATCCCTTATACC",4,40.72,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y66P I80E N107T K114I",4
"lib1","SARS-CoV-2","CGGAATCCTGGAAAGT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","T55L I104* C150M Y178C",4
"lib1","SARS-CoV-2","CGGAATCGCATTATGA",3,19.07,7.03,-3.73,0.39,2.16,1.34,0.02,">1 nonsynonymous","S19F C61S E141D",3
"lib1","SARS-CoV-2","CGGAATCTATTCTTTG",6,34.4,8.74,-2.03,0.36,1.5,1.12,0.05,">1 nonsynonymous","A22L N120I S129P",3
"lib1","SARS-CoV-2","CGGAATCTCAGCTTCC",7,32.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K94V G101L P161T S164P",4
"lib1","SARS-CoV-2","CGGAATGAAAAATTGT",2,14.61,10.25,-0.52,0.15,2.08,1.03,0.01,">1 nonsynonymous","L60Y Y66K D90Y",3
"lib1","SARS-CoV-2","CGGAATGAACTACTTT",3,62.15,10.69,-0.07,0.04,2.95,1.01,0,"1 nonsynonymous","S19P",1
"lib1","SARS-CoV-2","CGGAATGATAATGCAC",4,122.88,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N120E P133M F167T",3
"lib1","SARS-CoV-2","CGGAATGTGTATTAAT",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H F70R I104S T201Y",4
"lib1","SARS-CoV-2","CGGAATTAAATCAGAT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","S19* L188I",2
"lib1","SARS-CoV-2","CGGAATTGAATAATGT",8,102.76,10.81,0.05,0.05,2.95,1,0,">1 nonsynonymous","N4A P197Q",2
"lib1","SARS-CoV-2","CGGAATTGACTGTGCC",5,112.04,8.48,-2.29,0.13,2.13,1.13,0.01,">1 nonsynonymous","N13L N109T",2
"lib1","SARS-CoV-2","CGGAATTTCTGACTAT",4,41.07,9.4,-1.36,0.22,1.75,1.16,0.02,"1 nonsynonymous","D68T",1
"lib1","SARS-CoV-2","CGGAATTTTCACGCCC",7,74.95,6.06,-4.71,0.69,1.5,1.19,0.01,">1 nonsynonymous","D68T K94F C158S Y175V",4
"lib1","SARS-CoV-2","CGGACAAAAGATCCAG",7,0.05,NA,NA,NA,NA,NA,NA,"stop","S129I E141* R179Y",3
"lib1","SARS-CoV-2","CGGACAAAATGTGTAC",1,1.02,NA,NA,NA,NA,NA,NA,"stop","F12* V20M F44L D59R Q176I",5
"lib1","SARS-CoV-2","CGGACAAACGGGTATC",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F K128V T170Q",3
"lib1","SARS-CoV-2","CGGACAACGTTCAATA",4,217.11,9.39,-1.37,0.06,2.83,1.12,0,">1 nonsynonymous","F8L F62V G117T",3
"lib1","SARS-CoV-2","CGGACAACTGCAACCA",3,30.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A33H I88N K114P",3
"lib1","SARS-CoV-2","CGGACAAGTTTAGCCG",6,37.72,8.71,-2.06,0.32,1.5,1,0.04,">1 nonsynonymous","F47G T140A P149S",3
"lib1","SARS-CoV-2","CGGACAATGGGACCCT",5,76.78,6.78,-3.99,0.37,1.5,1.15,0.02,">1 nonsynonymous","P7S N107Y K128N",3
"lib1","SARS-CoV-2","CGGACAATGTCCCGCT",3,140.81,10.73,-0.03,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGACAATGTTATGAA",1,25.65,8.36,-2.41,0.44,1.54,1.12,0.05,">1 nonsynonymous","F12N P169R",2
"lib1","SARS-CoV-2","CGGACAATTAAGCTGA",8,1.75,NA,NA,NA,NA,NA,NA,"stop","A33* C49A D137P P161M Q168H",5
"lib1","SARS-CoV-2","CGGACACAAAATTGCC",3,188.7,10.07,-0.7,0.04,2.94,1,0,"1 nonsynonymous","N118T",1
"lib1","SARS-CoV-2","CGGACACCAATTAGAT",8,102.81,10.01,-0.76,0.07,2.8,1.06,0,">1 nonsynonymous","N120G E154W",2
"lib1","SARS-CoV-2","CGGACACCCCTACTTT",1,13.46,10.66,-0.11,0.06,2.86,1.02,0,">1 nonsynonymous","C61L N120G",2
"lib1","SARS-CoV-2","CGGACACCGTGACTCA",5,129.55,10.74,-0.02,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGACACCTCTCTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F47M T55G G86Y Y143E T201*",5
"lib1","SARS-CoV-2","CGGACACTCTCTGAAC",16,1.66,NA,NA,NA,NA,NA,NA,"stop","N1Q C61V A81V V103C L122* Y175*",6
"lib1","SARS-CoV-2","CGGACAGAATTAAATC",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N N30L K94R S113P L125D I138L",6
"lib1","SARS-CoV-2","CGGACAGTTATTCGAT",2,5.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","CGGACATACACTTCCT",3,37.28,9.25,-1.51,0.09,2.86,1.1,0,">1 nonsynonymous","T55Y G117L",2
"lib1","SARS-CoV-2","CGGACATATGAACAAA",4,84.76,9.15,-1.61,0.13,1.99,1.14,0.01,">1 nonsynonymous","T148N P161C",2
"lib1","SARS-CoV-2","CGGACATATGCGGAAA",2,110.34,10.69,-0.07,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGACATCTCAAAAAG",3,13.13,8.95,-1.81,0.22,1.72,1.26,0.02,"1 nonsynonymous","L162K",1
"lib1","SARS-CoV-2","CGGACATGCATCTTAG",3,34.93,6.11,-4.66,0.47,1.5,1.11,0.01,">1 nonsynonymous","G83E A105T D112K P177G",4
"lib1","SARS-CoV-2","CGGACATTACAACGAG",9,62.11,8.26,-2.5,0.16,1.5,1.1,0.01,">1 nonsynonymous","Y119C S139I",2
"lib1","SARS-CoV-2","CGGACATTAGTTATGA",2,38.29,9.51,-1.26,0.32,1.5,1.03,0.04,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","CGGACATTATAAAACC",2,83.99,10.59,-0.17,0.05,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGACATTTACCACGT",6,16.7,6.55,-4.22,0.59,1.5,1.16,0.04,">1 nonsynonymous","A22K F99Q Y119E K128V E154G",5
"lib1","SARS-CoV-2","CGGACCAAGACGAGAT",8,43.03,6.11,-4.66,0.51,1.67,1.11,0.01,">1 nonsynonymous","A18E D112G",2
"lib1","SARS-CoV-2","CGGACCACGGCGATGC",2,12.21,10.75,-0.01,0.05,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGACCACGTATTTCT",9,72.92,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R25V P161A T201L",3
"lib1","SARS-CoV-2","CGGACCAGAAATTAAT",16,342.96,10.73,-0.03,0.03,2.92,1.03,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","CGGACCGAATTTAGCG",5,32.43,6.19,-4.57,0.88,1.5,1.11,0.04,">1 nonsynonymous","C6D A18T Y66H D98S R179W",5
"lib1","SARS-CoV-2","CGGACCGACTAAAATG",8,45.95,6.09,-4.68,1.35,1.5,1.22,0.04,">1 nonsynonymous","G101S D112M Y165V",3
"lib1","SARS-CoV-2","CGGACCGATTACACAT",2,30.65,10.61,-0.15,0.12,2.83,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGGACCTTAATACTAT",2,6.1,6.77,-3.99,0.59,1.5,1,0.05,">1 nonsynonymous","Y50R A105E R179G",3
"lib1","SARS-CoV-2","CGGACGAAATATTTCC",11,159.36,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R27S S41L C150V",3
"lib1","SARS-CoV-2","CGGACGATGGGAAAAC",1,19.45,10.32,-0.45,0.08,2.84,1.08,0,">1 nonsynonymous","N109G N130L",2
"lib1","SARS-CoV-2","CGGACGATGTTATATG",19,185.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y N120I",2
"lib1","SARS-CoV-2","CGGACGCATAACCACA",2,74.45,10.16,-0.61,0.07,2.51,1.03,0,">1 nonsynonymous","K128R S139Y",2
"lib1","SARS-CoV-2","CGGACGCGGACAAACG",1,51.73,9.4,-1.36,0.22,1.72,1.17,0.02,">1 nonsynonymous","D90R Y165F S184I S200N",4
"lib1","SARS-CoV-2","CGGACGGCAATCCCTG",1,72.58,10.74,-0.02,0.07,2.89,1.07,0,">1 nonsynonymous","T55M L95I F160R K198T",4
"lib1","SARS-CoV-2","CGGACGGGTGGAGTCC",1,30.82,10.19,-0.57,0.08,2.84,1,0,">1 nonsynonymous","N1S F8L P149S N171C K198L",5
"lib1","SARS-CoV-2","CGGACGGTAAAATGGA",3,24.26,10.06,-0.7,0.06,2.92,1.01,0,"1 nonsynonymous","C6A",1
"lib1","SARS-CoV-2","CGGACGTGAATAGAGT",1,52.23,10.73,-0.04,0.09,2.92,1.05,0,">1 nonsynonymous","V115K P197E",2
"lib1","SARS-CoV-2","CGGACGTTTTATGAGC",2,5.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32A G86L Y121F G152N Q168F",5
"lib1","SARS-CoV-2","CGGACTAAGTGTGACG",7,0.43,NA,NA,NA,NA,NA,NA,"stop","I104S N118T N151*",3
"lib1","SARS-CoV-2","CGGACTATTAAGCAAG",5,73.2,10.7,-0.07,0.08,2.84,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGACTATTAGGAGTC",2,38.26,10.82,0.06,0.14,2.99,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGGACTCATACATTCA",4,45,9.26,-1.5,0.1,2.5,1.13,0,">1 nonsynonymous","L5W Y39R I142R",3
"lib1","SARS-CoV-2","CGGACTCCCAAATGCT",1,100.25,9.84,-0.92,0.1,2.19,1.05,0,">1 nonsynonymous","A14S Y39N G51S",3
"lib1","SARS-CoV-2","CGGACTCGTAAACCGG",5,177.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I142G P161G",2
"lib1","SARS-CoV-2","CGGACTGCCAAGATCT",2,16.76,6,-4.76,1.47,1.5,1.04,0.01,">1 nonsynonymous","P7S T63S L95C Y143N",4
"lib1","SARS-CoV-2","CGGACTTCAAGAACCC",4,44.26,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","E76T D97G R179M",3
"lib1","SARS-CoV-2","CGGACTTTCGTAGCTG",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T T55I S113H",3
"lib1","SARS-CoV-2","CGGACTTTTACCGAAC",1,14.04,10.06,-0.7,0.2,2.59,1.12,0.02,">1 nonsynonymous","R16T C61S T100N",3
"lib1","SARS-CoV-2","CGGAGAAATCTCGTAG",3,22.72,8.88,-1.89,0.15,2.23,1.15,0.01,">1 nonsynonymous","A33S I142R",2
"lib1","SARS-CoV-2","CGGAGAAGAACTAGCA",2,100.23,10.76,0,0.06,2.91,1.07,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","CGGAGACAACAGAACA",13,53,6.27,-4.49,0.56,1.5,1.15,0.01,">1 nonsynonymous","F8S C61F Y91S V103F N110R G146L",6
"lib1","SARS-CoV-2","CGGAGACTAAGCAAAA",5,15.24,7.82,-2.95,0.26,1.5,1.06,0.03,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","CGGAGACTAATCGGCA",3,60.23,9.96,-0.81,0.08,2.87,1.02,0,">1 nonsynonymous","N4S N118Y",2
"lib1","SARS-CoV-2","CGGAGACTGCAAGTCG",1,27.89,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S139I Y175P",2
"lib1","SARS-CoV-2","CGGAGACTGCCAACCT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96G R136M A190G",3
"lib1","SARS-CoV-2","CGGAGAGGGACACGCC",3,11.37,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","I2D N13K G101D G116E",4
"lib1","SARS-CoV-2","CGGAGATAGATACTTT",3,62.21,10.1,-0.66,0.05,2.83,1.02,0,">1 nonsynonymous","A89S I142F",2
"lib1","SARS-CoV-2","CGGAGATATTCACAAA",8,156.21,10.09,-0.68,0.08,2.38,1.01,0,"1 nonsynonymous","L95C",1
"lib1","SARS-CoV-2","CGGAGCAATAGACGAG",1,12,7.19,-3.57,0.45,1.5,1.15,0.06,">1 nonsynonymous","S41R V103L",2
"lib1","SARS-CoV-2","CGGAGCACGCGCTAAG",1,16.36,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","S19L V71H W106C N120A C150R",5
"lib1","SARS-CoV-2","CGGAGCCATAAAAGGG",5,86.55,9.91,-0.85,0.03,2.83,1.07,0,">1 nonsynonymous","I72C Q168N",2
"lib1","SARS-CoV-2","CGGAGCGCTCTAGGAC",2,48,10.6,-0.17,0.08,2.9,1.09,0,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","CGGAGCGTTGCCCGAC",1,47.59,9.94,-0.82,0.07,2.48,1.09,0,">1 nonsynonymous","A18F T46I E141S",3
"lib1","SARS-CoV-2","CGGAGCTAATCCCGAA",5,109.83,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C49M F70R G86S",3
"lib1","SARS-CoV-2","CGGAGCTCGGCCAAAT",9,0.48,NA,NA,NA,NA,NA,NA,"stop","I28* C61V T100I R136W",4
"lib1","SARS-CoV-2","CGGAGCTGACACAAGC",4,32.86,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","V37L T55R N107W C150E S184L",5
"lib1","SARS-CoV-2","CGGAGCTGACCAAAAC",4,23.64,10.19,-0.58,0.11,2.92,1.03,0,">1 nonsynonymous","L5F S29I T170S",3
"lib1","SARS-CoV-2","CGGAGCTTCTTTAATT",2,43.71,10.72,-0.05,0.09,2.94,1.03,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","CGGAGGAAGTCTACCG",5,165.09,10.75,-0.01,0.08,2.85,1.08,0,">1 nonsynonymous","N4A L122S",2
"lib1","SARS-CoV-2","CGGAGGAATCTCGGAC",10,294.73,7.75,-3.02,0.11,1.83,1.14,0,">1 nonsynonymous","R16K G116S Y175V",3
"lib1","SARS-CoV-2","CGGAGGACAAGTTTGT",3,18.89,10.87,0.1,0.1,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGAGGAGAAGCACTA",3,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M G86R I142D P197V",4
"lib1","SARS-CoV-2","CGGAGGCACCGACCGT",2,18.32,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","G86C Y91T I104E I142S P197L",5
"lib1","SARS-CoV-2","CGGAGGCAGATACCAT",6,50.56,8.96,-1.8,0.15,1.7,1.14,0.01,">1 nonsynonymous","S45D Y121M S129F S139V",4
"lib1","SARS-CoV-2","CGGAGGCCGCCGCTAG",2,1.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","CGGAGGGATATCCCAG",5,35.72,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C49L D59W R124S",3
"lib1","SARS-CoV-2","CGGAGGGCTCAAGAAT",2,29.63,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","K56D C61S E141F C158L",4
"lib1","SARS-CoV-2","CGGAGTAAGCCTACTG",1,44.99,10.09,-0.68,0.06,2.01,1.02,0,">1 nonsynonymous","N1Y F99L I138V",3
"lib1","SARS-CoV-2","CGGAGTAAGGCGACCA",7,47.27,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A14V G86I G155A S200M",4
"lib1","SARS-CoV-2","CGGAGTAATACCAAGG",2,30.58,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I80L V103S T140S E154F Y165K S184Y",6
"lib1","SARS-CoV-2","CGGAGTAATGCAGCAT",4,63.46,9.38,-1.39,0.22,1.5,1.03,0.02,">1 nonsynonymous","A22Y S36E P96R",3
"lib1","SARS-CoV-2","CGGAGTATCACCTAAA",4,131.15,9.24,-1.53,0.06,2.8,1.11,0,">1 nonsynonymous","I88V Y119Q T201M",3
"lib1","SARS-CoV-2","CGGAGTCAGCAAACAA",7,61.17,10.09,-0.68,0.06,2.85,1.04,0,">1 nonsynonymous","I2V C6G N130S",3
"lib1","SARS-CoV-2","CGGAGTGCTGTTCCCA",1,7.84,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V77M K87I V103G K128L",4
"lib1","SARS-CoV-2","CGGAGTGTCTGTATAA",5,22.39,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","G9D V32L F70W",3
"lib1","SARS-CoV-2","CGGAGTGTTGGTGAGA",2,37.03,10.84,0.07,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGAGTTACTTTACAG",2,5.81,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","G86C",1
"lib1","SARS-CoV-2","CGGAGTTAGCGCTCCA",10,7.67,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","CGGAGTTATCAACACT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib1","SARS-CoV-2","CGGAGTTGAACGACAA",1,29.91,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V11A D90I W106L R127I",4
"lib1","SARS-CoV-2","CGGATAAACACGTTTT",2,41.13,10.7,-0.06,0.06,2.87,1.05,0,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","CGGATAAACAGCCAGC",5,63.17,10.37,-0.39,0.12,2.75,1,0.01,"1 nonsynonymous","Y66S",1
"lib1","SARS-CoV-2","CGGATAAATAAGCCTT",6,70.55,9.43,-1.34,0.14,1.77,1.17,0.01,">1 nonsynonymous","V37E P96S R136V",3
"lib1","SARS-CoV-2","CGGATAAATGAGGTTT",1,23.37,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F12S G83R Y121S",3
"lib1","SARS-CoV-2","CGGATAACTACACGGT",3,0.96,NA,NA,NA,NA,NA,NA,"stop","D68L D97* Y123R",3
"lib1","SARS-CoV-2","CGGATAACTATTAAAG",8,91.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10T N107F K128Y",3
"lib1","SARS-CoV-2","CGGATAAGCTAAAAGG",3,11.61,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S43T W106T F167M",3
"lib1","SARS-CoV-2","CGGATAAGTGCTGTAG",2,5.93,6,-4.76,2,1.5,1.04,0.03,">1 nonsynonymous","N13I I28Y G86P Y119L P149S G152M Q168S",7
"lib1","SARS-CoV-2","CGGATAATACGCGCGT",4,59.99,9.78,-0.98,0.18,1.79,1.08,0.01,">1 nonsynonymous","P7W N58F N120M A190N",4
"lib1","SARS-CoV-2","CGGATAATCAGTGAGG",3,10.25,9.53,-1.24,0.08,2.76,1.19,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","CGGATAATCTTTCTAG",2,20.91,10.73,-0.04,0.07,2.95,1.04,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","CGGATAATTCTAAAAT",4,13.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36K D112R E141W Q168G",4
"lib1","SARS-CoV-2","CGGATACAGAAGACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib1","SARS-CoV-2","CGGATACGCGAGCTTA",25,386.5,10.76,0,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGATACGGATTGAAC",2,6.53,10.63,-0.13,0.12,2.62,1.3,0.01,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","CGGATACTGATGAGAA",3,14.21,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G83Q P96H Y143L P149L Q168I",5
"lib1","SARS-CoV-2","CGGATATAACGCGACC",1,5.2,9.93,-0.84,0.3,2.24,1.02,0.02,">1 nonsynonymous","I142S P149S P197G",3
"lib1","SARS-CoV-2","CGGATATAATCGGGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","W106* Y123R E154F T201S",4
"lib1","SARS-CoV-2","CGGATATAATGTCACC",8,105.8,10.67,-0.09,0.07,2.89,1.06,0,"1 nonsynonymous","K132A",1
"lib1","SARS-CoV-2","CGGATATATCTGTTAG",1,5.22,6.12,-4.65,1.52,1.5,1.3,0.06,">1 nonsynonymous","I2V R16K F167A",3
"lib1","SARS-CoV-2","CGGATATGAATGGTGA",13,80.7,9.52,-1.24,0.12,2.16,1.08,0.01,">1 nonsynonymous","A81L G174M",2
"lib1","SARS-CoV-2","CGGATATTACTAACTA",4,59.72,9.79,-0.98,0.1,2.75,1.02,0,">1 nonsynonymous","R16I K48M E154I",3
"lib1","SARS-CoV-2","CGGATATTTCAGTAAA",4,22.11,10.35,-0.41,0.11,2.62,1.06,0.01,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","CGGATCAAGAGAATAC",1,5.73,11.04,0.27,0.14,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGATCAATAAAAGGT",1,35.32,10.33,-0.43,0.07,2.86,1,0,">1 nonsynonymous","R16V G51S P149L",3
"lib1","SARS-CoV-2","CGGATCAATGTCTCGT",3,33.57,8.43,-2.34,0.1,2.1,1.05,0,"1 nonsynonymous","Y165C",1
"lib1","SARS-CoV-2","CGGATCACTCACCATA",3,7.5,9.23,-1.53,0.13,2.77,1.05,0,">1 nonsynonymous","I2D I142R",2
"lib1","SARS-CoV-2","CGGATCAGCAAATACA",3,172.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","E10D S113V Y175M",3
"lib1","SARS-CoV-2","CGGATCAGGGCACTAA",5,62.38,8.54,-2.23,0.14,1.5,1.08,0.01,">1 nonsynonymous","Y39P F47L Y121N",3
"lib1","SARS-CoV-2","CGGATCCCCATAATGA",4,32.41,6,-4.76,2,3,1.3,0.02,">1 nonsynonymous","A67I L95Y V103L F167Q",4
"lib1","SARS-CoV-2","CGGATCCGCTGGGGTT",3,33.94,10.72,-0.05,0.1,2.98,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGGATCTACTGCAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C6S C61K L95P V180*",4
"lib1","SARS-CoV-2","CGGATCTTGCTAGGCA",11,63.38,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S19R S29L D34Y L95H G152C T201R",6
"lib1","SARS-CoV-2","CGGATGAAACATAAAA",7,1.33,NA,NA,NA,NA,NA,NA,"stop","P7H S19L V32F V115* Q168C",5
"lib1","SARS-CoV-2","CGGATGAACCAAATAC",5,75.06,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F47Y G86L F167V",3
"lib1","SARS-CoV-2","CGGATGAACGAGACAA",2,31.69,10.93,0.17,0.07,2.95,1,0,">1 nonsynonymous","K128P K199M",2
"lib1","SARS-CoV-2","CGGATGACATGAGATA",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S T85V N120S G172D V182L",5
"lib1","SARS-CoV-2","CGGATGACTAGACCTT",6,35.99,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","N4M G9F Y91T T148I C150V",5
"lib1","SARS-CoV-2","CGGATGATGACTATGA",6,79.96,6,-4.76,1.04,1.5,1.17,0.01,">1 nonsynonymous","T3V C102V N157H",3
"lib1","SARS-CoV-2","CGGATGCAGCGAACCT",1,18.05,8.37,-2.39,0.17,2.12,1.09,0.01,">1 nonsynonymous","E154A F167L",2
"lib1","SARS-CoV-2","CGGATGCTAATCCAGA",7,218.15,10.64,-0.12,0.04,2.9,1.01,0,"1 nonsynonymous","S53C",1
"lib1","SARS-CoV-2","CGGATGCTAGCAATCA",5,42.85,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L38T T55S V77T Y143N P149C F156S",6
"lib1","SARS-CoV-2","CGGATGTAAAAAGACA",1,43.51,6,-4.76,2,3,1.22,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CGGATGTACCACTATC",4,2.92,NA,NA,NA,NA,NA,NA,"stop","Y39N K87* L111I",3
"lib1","SARS-CoV-2","CGGATGTCTTAAAAAA",3,56.43,10.07,-0.69,0.08,2.71,1,0,">1 nonsynonymous","A42P V65G T100I S184C",4
"lib1","SARS-CoV-2","CGGATTAACTGCTTAC",9,63.09,9.91,-0.86,0.12,1.88,1.07,0.01,">1 nonsynonymous","R25K N110K",2
"lib1","SARS-CoV-2","CGGATTAGACCAATGT",3,56.46,9.81,-0.95,0.11,2.16,1.06,0.01,">1 nonsynonymous","I2K A22T I72C N151Q",4
"lib1","SARS-CoV-2","CGGATTATAATGTACT",4,54.36,10.11,-0.66,0.1,2.63,1.03,0,">1 nonsynonymous","L60T Y123K F134H N151R",4
"lib1","SARS-CoV-2","CGGATTATATCAACAG",5,46.93,7.92,-2.84,0.21,1.87,1.19,0.02,">1 nonsynonymous","A42W L57Q N120T",3
"lib1","SARS-CoV-2","CGGATTCACTGCCTAA",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S L60P I104D",3
"lib1","SARS-CoV-2","CGGATTGCAATATCTT",2,55.25,10.17,-0.59,0.09,2.69,1.05,0,"1 nonsynonymous","L57Y",1
"lib1","SARS-CoV-2","CGGATTGCTTAATTAC",4,33.46,7.05,-3.71,0.35,1.5,1.1,0.02,">1 nonsynonymous","N1M A22T S45E K87M G155Y",5
"lib1","SARS-CoV-2","CGGATTGTAAATAAAG",2,0.22,NA,NA,NA,NA,NA,NA,"stop","P96D L125* S139F",3
"lib1","SARS-CoV-2","CGGATTGTAATCAAGT",1,66.47,10.79,0.03,0.06,2.9,1.06,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","CGGATTTCGGGTCGTT",6,116.95,6,-4.76,0.96,1.5,1.16,0.01,">1 nonsynonymous","N40P K56N Y91S Y119L",4
"lib1","SARS-CoV-2","CGGATTTTTTATTGAA",1,28.4,10.23,-0.54,0.12,2.8,1,0,">1 nonsynonymous","T46L G152I",2
"lib1","SARS-CoV-2","CGGCAAAAAGGAAAGA",1,14.69,6,-4.76,2,2.06,1.2,0.01,">1 nonsynonymous","C61L G117Q Q176K",3
"lib1","SARS-CoV-2","CGGCAAAATATTCACA",8,104.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38R L60V I104F D112T N120W",5
"lib1","SARS-CoV-2","CGGCAAACCATAAAAA",5,74.22,10.62,-0.14,0.05,2.86,1.06,0,">1 nonsynonymous","N1K S41Y D59R",3
"lib1","SARS-CoV-2","CGGCAAACCGTTGCCA",4,131.31,6,-4.76,1.62,1.5,1.15,0.01,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","CGGCAAACGAGAATGT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","D68M P96* Q176T",3
"lib1","SARS-CoV-2","CGGCAAAGAAGATAAA",2,64.43,10.29,-0.48,0.07,2.89,1.04,0,">1 nonsynonymous","V37L Y66S",2
"lib1","SARS-CoV-2","CGGCAAATGACAAGAC",2,46.9,10.69,-0.07,0.06,2.95,1.04,0,">1 nonsynonymous","I2V T148V",2
"lib1","SARS-CoV-2","CGGCAACAACACGACA",2,41.16,6.04,-4.72,0.91,1.5,1.17,0.02,">1 nonsynonymous","V52P L122K F167D",3
"lib1","SARS-CoV-2","CGGCAACAATAATCGT",5,56.54,6,-4.76,2,3,1.2,0,">1 nonsynonymous","I104S N109S Q144Y N151P",4
"lib1","SARS-CoV-2","CGGCAACATCATCGGC",4,185.82,6.18,-4.58,0.49,1.5,1.16,0.01,">1 nonsynonymous","P149L Y178G",2
"lib1","SARS-CoV-2","CGGCAACCACACATCG",3,42.28,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","C6N V20N V37L",3
"lib1","SARS-CoV-2","CGGCAACTGAAAGCCT",3,15.69,9.43,-1.34,0.06,2.92,1.07,0,">1 nonsynonymous","S43G Y119T",2
"lib1","SARS-CoV-2","CGGCAAGAAGCGACAA",2,16.55,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","A14R K56M P96I N107I",4
"lib1","SARS-CoV-2","CGGCAAGCCTCCCATG",1,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128Q",1
"lib1","SARS-CoV-2","CGGCAAGGTCACCTAC",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S147A V180R",2
"lib1","SARS-CoV-2","CGGCAAGTCACTCGTT",3,14.02,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","C6F F167V",2
"lib1","SARS-CoV-2","CGGCAATAAGGCACAT",3,18.38,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50K S53F T100L",3
"lib1","SARS-CoV-2","CGGCAATAGAGAATCC",2,50.49,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G101W F134Q C195L",3
"lib1","SARS-CoV-2","CGGCAATCAAGATATA",1,13.03,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F44Y N92I R179P",3
"lib1","SARS-CoV-2","CGGCAATCGCCATTAT",4,1.8,NA,NA,NA,NA,NA,NA,"stop","F17M T46R F99* T140E Y175G",5
"lib1","SARS-CoV-2","CGGCAATGCAAACGGA",1,30.75,10.77,0.01,0.07,2.89,1,0,">1 nonsynonymous","S41A N171H",2
"lib1","SARS-CoV-2","CGGCAATGGTAAAGGT",10,125.31,10.79,0.03,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGCACAAAATTCGAA",2,14.81,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N4Y G86S D90P R127Y V153Y",5
"lib1","SARS-CoV-2","CGGCACAATACGACTT",3,24.23,10.5,-0.26,0.07,2.9,1.03,0,">1 nonsynonymous","T55C A190R",2
"lib1","SARS-CoV-2","CGGCACACACTAGCTA",4,97.31,10.47,-0.29,0.04,2.87,1.04,0,">1 nonsynonymous","D59E Y91L A190I",3
"lib1","SARS-CoV-2","CGGCACATAAAGCTCA",6,77.24,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9M D68V Y123A",3
"lib1","SARS-CoV-2","CGGCACATACCATGTA",13,162.22,6.93,-3.84,0.25,1.5,1.14,0.01,">1 nonsynonymous","I142L Y165E",2
"lib1","SARS-CoV-2","CGGCACCCTAGAAGAT",3,95.63,10.75,-0.02,0.06,2.91,1.05,0,">1 nonsynonymous","T85R D97L",2
"lib1","SARS-CoV-2","CGGCACCGTACGCAAG",3,31.12,7.67,-3.1,0.42,1.5,1.11,0.06,"1 nonsynonymous","W106D",1
"lib1","SARS-CoV-2","CGGCACCTATGCTATA",2,34.48,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y143P C158H",2
"lib1","SARS-CoV-2","CGGCACGGCAAAAACG",2,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10L Y35A C61S D75W K132V P161S",7
"lib1","SARS-CoV-2","CGGCACGTATAGATAG",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75L K199N",2
"lib1","SARS-CoV-2","CGGCACGTTCCAATAC",5,15.53,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G51D G74K A105V Y143E G152S",5
"lib1","SARS-CoV-2","CGGCACTAACATAGCA",3,38.03,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","V77Y N120L Y178F",3
"lib1","SARS-CoV-2","CGGCACTAATTGCAAA",7,33.61,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","S19L G166W",2
"lib1","SARS-CoV-2","CGGCACTAGAGTTCTT",2,100.76,10.7,-0.07,0.05,2.91,1.06,0,"1 nonsynonymous","I2H",1
"lib1","SARS-CoV-2","CGGCACTCTTCGGGAT",8,66.12,10.74,-0.02,0.1,2.84,1.06,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","CGGCACTGTTGTCTCG",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D N157V",2
"lib1","SARS-CoV-2","CGGCACTTTATGTATA",11,169.39,10.56,-0.21,0.04,2.9,1.05,0,"1 nonsynonymous","S53F",1
"lib1","SARS-CoV-2","CGGCAGATAAATATTC",3,8.03,6,-4.76,2,3,1.01,0,">1 nonsynonymous","A81V Y93P",2
"lib1","SARS-CoV-2","CGGCAGATAACAGGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","F47N L95Y F156L Q163*",4
"lib1","SARS-CoV-2","CGGCAGCTCAACGGGG",8,2.93,NA,NA,NA,NA,NA,NA,"stop","N1A Y39W V71* T201R",4
"lib1","SARS-CoV-2","CGGCAGCTGATTATAT",5,19.97,7.84,-2.93,0.33,1.5,1.15,0.05,">1 nonsynonymous","I2A I28E F44P D90S",4
"lib1","SARS-CoV-2","CGGCAGCTTGTAAAAT",1,108.12,6.12,-4.65,0.6,1.5,1.17,0.01,">1 nonsynonymous","S41P N58L V173T",3
"lib1","SARS-CoV-2","CGGCAGGATAAGACAC",2,37.28,10.81,0.05,0.09,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGCAGTACGATTACA",6,129.51,6,-4.76,1.75,1.5,1.2,0.01,">1 nonsynonymous","V20M Y39I P133S",3
"lib1","SARS-CoV-2","CGGCATAAACAAATTA",3,28.03,7.07,-3.69,0.38,1.5,1.08,0.03,">1 nonsynonymous","N58S V103C Y175N",3
"lib1","SARS-CoV-2","CGGCATAACGGCCTAG",1,28.91,10.75,-0.02,0.07,2.83,1.08,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","CGGCATAATGAAAATA",7,36.52,9.31,-1.46,0.24,1.5,1.15,0.02,">1 nonsynonymous","A42V D90T I104Y P149Y E154T",5
"lib1","SARS-CoV-2","CGGCATAGACAAGACG",4,25.61,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F12S S41R I88M I142Y F156T",5
"lib1","SARS-CoV-2","CGGCATATTGACCGAC",5,21.98,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","P82Y Y93C V115G E141N",4
"lib1","SARS-CoV-2","CGGCATCCAGACCTAG",6,68.54,6.03,-4.73,1.27,1.5,1.31,0.03,">1 nonsynonymous","R16D A81T S113L V115M Y119F",5
"lib1","SARS-CoV-2","CGGCATCTAAATATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70R D97V I104M S200L",4
"lib1","SARS-CoV-2","CGGCATGTCTTTGTTG",1,15.08,9.98,-0.79,0.09,2.8,1.02,0,">1 nonsynonymous","N4Y S43T K114G",3
"lib1","SARS-CoV-2","CGGCATTACAGCCAAC",8,50.86,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60A G83S W106G V181L",4
"lib1","SARS-CoV-2","CGGCATTATGTCATAC",2,46.31,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C61T A81W P133R Y178S",4
"lib1","SARS-CoV-2","CGGCATTGAAAGATAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","C6Y P149*",2
"lib1","SARS-CoV-2","CGGCATTGAATTTGTA",13,169.1,10.2,-0.56,0.05,2.84,1,0,"1 nonsynonymous","C6H",1
"lib1","SARS-CoV-2","CGGCATTGACCGACCG",8,122.5,10.84,0.08,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGCATTTAAGCAAAG",9,1.69,NA,NA,NA,NA,NA,NA,"stop","N92K S113E S184*",3
"lib1","SARS-CoV-2","CGGCCAACAATAGATT",2,28.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9I D34C F47S T100A G146T",5
"lib1","SARS-CoV-2","CGGCCAACCTCTTTGT",18,402.93,10.01,-0.75,0.06,2.26,1.02,0,">1 nonsynonymous","G83V K128V",2
"lib1","SARS-CoV-2","CGGCCAATAAAATATT",2,55.51,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D90V N107W",2
"lib1","SARS-CoV-2","CGGCCACTGGACCTGA",4,59.58,8.59,-2.17,0.29,1.5,1.07,0.04,">1 nonsynonymous","S45K R136G T201R",3
"lib1","SARS-CoV-2","CGGCCAGACGCATATT",2,30.54,7.93,-2.83,0.35,1.5,1.1,0.04,">1 nonsynonymous","G86D T140Y",2
"lib1","SARS-CoV-2","CGGCCAGATACGTCTA",3,48.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T63S D68A Q84K L95Q G152C K199L",6
"lib1","SARS-CoV-2","CGGCCAGCAATCTAGA",7,53.24,6,-4.76,1.67,1.5,1.2,0.04,">1 nonsynonymous","F99C E141K V153N",3
"lib1","SARS-CoV-2","CGGCCATTAACCAAAC",1,0.58,NA,NA,NA,NA,NA,NA,"stop","S29R K56W D112M N151* N157W G172Y",6
"lib1","SARS-CoV-2","CGGCCCAACGCAAACG",9,40.46,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N13F E135P F167E",3
"lib1","SARS-CoV-2","CGGCCCCCTATGTCCT",1,23.08,6,-4.76,2,2.03,1.14,0.02,">1 nonsynonymous","R124N A190R",2
"lib1","SARS-CoV-2","CGGCCCCGGGAACATA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R I28M F44M N58V",4
"lib1","SARS-CoV-2","CGGCCCGAGAGTAAAA",6,166.18,10.68,-0.09,0.05,2.94,1.01,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","CGGCCCTAACTTTCAC",7,27.36,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","R25D Y66L",2
"lib1","SARS-CoV-2","CGGCCGTTACATGTAA",1,22.97,10.52,-0.24,0.1,2.8,1.09,0.01,"1 nonsynonymous","S45Y",1
"lib1","SARS-CoV-2","CGGCCTAAAGTATCAA",8,51.58,7.01,-3.76,0.38,1.5,1.08,0.03,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","CGGCCTAATACTACGC",1,6.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V C102L Y159P",3
"lib1","SARS-CoV-2","CGGCCTCGTAGATGCG",3,34.99,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V71K K87E D90V K128R K198Q",5
"lib1","SARS-CoV-2","CGGCCTCTAATATCGC",7,45.17,10.51,-0.26,0.04,2.93,1.03,0,">1 nonsynonymous","A42Y G83N",2
"lib1","SARS-CoV-2","CGGCCTGACCTGCTAT",4,68.06,6.97,-3.8,0.29,1.5,1.16,0.02,"1 nonsynonymous","V71E",1
"lib1","SARS-CoV-2","CGGCGAAGACCCCCCA",1,16.49,10.42,-0.35,0.1,2.87,1,0,">1 nonsynonymous","N64L S139K",2
"lib1","SARS-CoV-2","CGGCGACACGATAAAC",2,3.2,NA,NA,NA,NA,NA,NA,"stop","K26L S43L G101* D112V N118A F156Q T201A",7
"lib1","SARS-CoV-2","CGGCGAGCACATTATC",1,10.4,6,-4.76,2,3,1.13,0.01,"1 nonsynonymous","Y93E",1
"lib1","SARS-CoV-2","CGGCGCAACTAGACAA",1,25.59,6.62,-4.14,0.36,1.5,1.11,0.02,">1 nonsynonymous","C102M Y123G Q176T",3
"lib1","SARS-CoV-2","CGGCGCCAATTAATAA",3,12.3,6.08,-4.69,1.93,1.5,1.09,0.03,">1 nonsynonymous","A14V V20L K128L",3
"lib1","SARS-CoV-2","CGGCGCGAATTCCAGC",5,12.13,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N4K P7Y T15I D112G E135S",5
"lib1","SARS-CoV-2","CGGCGCGTTGATCAAA",15,244.48,10.53,-0.23,0.04,2.88,1.05,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","CGGCGCTCGAACCTAA",2,42.64,9.31,-1.46,0.15,2.22,1.21,0.01,"1 nonsynonymous","V11H",1
"lib1","SARS-CoV-2","CGGCGGAACATAACGC",10,148,10.4,-0.37,0.05,2.92,1.01,0,">1 nonsynonymous","Q144K P149T",2
"lib1","SARS-CoV-2","CGGCGGAACATATGAC",2,16.03,10.78,0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGCGGACACTTATCA",3,87.89,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L57G K87F F99W Y175L",4
"lib1","SARS-CoV-2","CGGCGGGATAAATAAC",1,25.4,10.77,0.01,0.09,2.85,1.04,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","CGGCGGTTATATAATG",1,15.11,10.69,-0.07,0.08,2.82,1.18,0,">1 nonsynonymous","C61S K87R",2
"lib1","SARS-CoV-2","CGGCGTACTATGCGAT",3,37.58,9.84,-0.92,0.1,2.11,1.1,0,">1 nonsynonymous","T63F I80L",2
"lib1","SARS-CoV-2","CGGCGTATCTCATTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L C61* D90N S113D",4
"lib1","SARS-CoV-2","CGGCGTCACAAGCGAT",13,146.71,10.61,-0.16,0.04,2.87,1.04,0,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","CGGCGTTAACTTAGCC",10,103.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16M A81E F99L F160L",4
"lib1","SARS-CoV-2","CGGCGTTAGAAAATTC",1,24.31,9.95,-0.81,0.12,2.02,1.04,0.01,">1 nonsynonymous","W106R G116P",2
"lib1","SARS-CoV-2","CGGCTAAAGCCCATGT",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I S139F G155T",3
"lib1","SARS-CoV-2","CGGCTAAAGCTGTAAA",4,38.99,9.16,-1.61,0.15,1.54,1.12,0.01,">1 nonsynonymous","A89M S113A V173H",3
"lib1","SARS-CoV-2","CGGCTAAATACACATC",3,64.44,9.97,-0.79,0.07,2.29,1.04,0,"1 nonsynonymous","G51Y",1
"lib1","SARS-CoV-2","CGGCTAATAAGATGCT",9,81.35,8.87,-1.9,0.19,1.54,1.2,0.01,">1 nonsynonymous","L60W W106S L187Q",3
"lib1","SARS-CoV-2","CGGCTACGTGAACGTG",3,11.48,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A33H A81P",2
"lib1","SARS-CoV-2","CGGCTACTAACATAAC",1,11.08,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3N I28W D59N D90N N118R P161G",6
"lib1","SARS-CoV-2","CGGCTACTCTTATACG",3,2.26,NA,NA,NA,NA,NA,NA,"stop","N13* R127A",2
"lib1","SARS-CoV-2","CGGCTAGGACAATCGG",9,87.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14M V71L K87L N92T R124M T140L",6
"lib1","SARS-CoV-2","CGGCTAGGCCCCAAAT",7,40.65,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","T63L I72A D90K K132Q",4
"lib1","SARS-CoV-2","CGGCTATCAATATTTC",1,12.22,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86F T170F",2
"lib1","SARS-CoV-2","CGGCTATCCGATACTA",11,127.33,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","R16N P82L L95P Y119M G155V",5
"lib1","SARS-CoV-2","CGGCTATTCATTTCGT",2,38.67,10.79,0.02,0.06,2.94,1.01,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","CGGCTATTGATTCTTT",1,0.28,NA,NA,NA,NA,NA,NA,"stop","A22* F156R",2
"lib1","SARS-CoV-2","CGGCTATTGGTATAAG",8,34.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C L95S T100H W106L A145Y",5
"lib1","SARS-CoV-2","CGGCTCAATCCTTAAC",2,68.71,6.27,-4.5,0.45,1.5,1.12,0.01,">1 nonsynonymous","Y35V L95S",2
"lib1","SARS-CoV-2","CGGCTCACATTTCACG",3,36.49,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y50T A89R",2
"lib1","SARS-CoV-2","CGGCTCACGGGCTGAG",2,75.47,9.56,-1.2,0.12,2.45,1.14,0.01,">1 nonsynonymous","C31F G116Q",2
"lib1","SARS-CoV-2","CGGCTCCAACTTGAAA",3,37.24,6.34,-4.42,0.43,1.5,1.18,0.01,">1 nonsynonymous","K56L R73W",2
"lib1","SARS-CoV-2","CGGCTCCAATTGTCCA",5,37.91,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I104H S108P Y119V G155D N171G",5
"lib1","SARS-CoV-2","CGGCTCGGTCGTCTAA",2,139.18,10.76,-0.01,0.08,2.91,1.03,0,">1 nonsynonymous","V153H K198Y",2
"lib1","SARS-CoV-2","CGGCTCTATAAAGAGT",1,65.8,10.73,-0.03,0.07,2.88,1.08,0,"1 nonsynonymous","K128Q",1
"lib1","SARS-CoV-2","CGGCTGAAAATAGACC",4,56.17,6,-4.76,1.15,1.5,1.14,0.01,">1 nonsynonymous","L38T G86S G166W",3
"lib1","SARS-CoV-2","CGGCTGAAAGTCTCAG",6,0,NA,NA,NA,NA,NA,NA,"stop","C31* Y91R T100L A190Y T201K",5
"lib1","SARS-CoV-2","CGGCTGAACTACCGCG",2,38.7,10.29,-0.47,0.07,2.94,1,0,">1 nonsynonymous","R27P K114F",2
"lib1","SARS-CoV-2","CGGCTGAATGACCCTC",4,40.66,7,-3.76,0.35,1.5,1.16,0.03,">1 nonsynonymous","T15G I28Y Y93H L125P",4
"lib1","SARS-CoV-2","CGGCTGACAAATGTAT",8,224.32,10.36,-0.41,0.04,2.9,1.03,0,">1 nonsynonymous","G9P K48E V65L",3
"lib1","SARS-CoV-2","CGGCTGAGTGGATGAT",1,13.65,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N13R R25L",2
"lib1","SARS-CoV-2","CGGCTGCCACAAAAAG",4,19.81,8.24,-2.52,0.26,1.5,1.06,0.03,">1 nonsynonymous","C6T T63N P133D",3
"lib1","SARS-CoV-2","CGGCTGTATATTGATT",3,13.02,10.88,0.12,0.18,2.84,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGGCTGTCTTGACTAC",1,63.98,10.66,-0.11,0.04,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGCTTAGATCATCTG",2,37.86,10.83,0.07,0.09,2.86,1.07,0,"1 nonsynonymous","Q84A",1
"lib1","SARS-CoV-2","CGGCTTAGCCGAGTTA",1,9.57,9.84,-0.93,0.06,2.98,1,0,">1 nonsynonymous","C6W S184T",2
"lib1","SARS-CoV-2","CGGCTTCTAGTCTAAC",3,21.85,10.58,-0.19,0.07,2.9,1.02,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","CGGCTTCTCCGAAAAC",7,1.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","CGGCTTGATCCGGTCA",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L T170A S184G",3
"lib1","SARS-CoV-2","CGGCTTTCTATCTAAG",12,129.15,10.67,-0.09,0.06,2.96,1.02,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","CGGCTTTTGACTACGA",2,39.43,10.77,0,0.05,2.86,1.11,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","CGGGAAAACACAATAT",11,0.78,NA,NA,NA,NA,NA,NA,"stop","S45L T55G K87S G101*",4
"lib1","SARS-CoV-2","CGGGAAACATTACCGG",1,27,10.22,-0.55,0.05,2.86,1.04,0,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","CGGGAAAGGCCAGAAA",8,8.89,NA,NA,NA,NA,NA,NA,"stop","L95* C102Y N107L N120* P149S C158T Y178I",7
"lib1","SARS-CoV-2","CGGGAAATACGATGTC",3,89.99,8.69,-2.08,0.12,1.6,1.16,0.01,">1 nonsynonymous","A14S P161V",2
"lib1","SARS-CoV-2","CGGGAACAACAATCCT",4,45.14,8.4,-2.37,0.17,1.74,1.1,0.01,">1 nonsynonymous","F44I Y91A Y123R",3
"lib1","SARS-CoV-2","CGGGAACAATAACTTC",6,22.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N92R D112C",2
"lib1","SARS-CoV-2","CGGGAACAATTCCATT",4,1.04,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","CGGGAACACAAGGTCC",4,82.4,10.28,-0.49,0.06,2.84,1.05,0,">1 nonsynonymous","A81S Y91L",2
"lib1","SARS-CoV-2","CGGGAACACTACCGTT",2,13.43,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y93M F134P",2
"lib1","SARS-CoV-2","CGGGAATCGAAGCTAA",4,69.42,6,-4.76,1.27,3,1.19,0,">1 nonsynonymous","Y66S D98L R124H",3
"lib1","SARS-CoV-2","CGGGACAATGACAGGG",5,1,NA,NA,NA,NA,NA,NA,"stop","S19* K56R E135I",3
"lib1","SARS-CoV-2","CGGGACATATTAACAG",3,45.62,8.8,-1.97,0.17,2.25,1.23,0.01,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","CGGGACATGCGATAAG",1,0.59,NA,NA,NA,NA,NA,NA,"stop","G9* S41V V153S",3
"lib1","SARS-CoV-2","CGGGACCCAAAGGCGT",2,52.57,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90G G117V Y143S",3
"lib1","SARS-CoV-2","CGGGACCCGAATGTAG",1,14.6,6.27,-4.49,0.93,1.5,1.25,0.04,">1 nonsynonymous","A18I A42R A81T",3
"lib1","SARS-CoV-2","CGGGACCGAATACTCA",4,32.65,6,-4.76,1.35,1.5,1.09,0.01,">1 nonsynonymous","G9P A18K T148N G166P S200M",5
"lib1","SARS-CoV-2","CGGGACCGTCAACGAA",4,15.44,6.45,-4.31,0.63,1.5,1.2,0.04,">1 nonsynonymous","T15L Y119M R127A P149S",4
"lib1","SARS-CoV-2","CGGGACCTAGCAGCTA",2,29.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61S N107M P133L G155A",4
"lib1","SARS-CoV-2","CGGGACGAGTAGCTTT",7,119.47,10.69,-0.07,0.07,2.91,1.07,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","CGGGACGGTCATATTT",4,3.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CGGGACGTAAATCACG",7,71.6,9.77,-0.99,0.1,2.13,1.1,0.01,">1 nonsynonymous","D97R G116S F134E",3
"lib1","SARS-CoV-2","CGGGACTACATGGATA",4,1.57,NA,NA,NA,NA,NA,NA,"stop","F12* P161I",2
"lib1","SARS-CoV-2","CGGGACTTACCCAAAT",1,11.86,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49V L95K G146A N171I K198R",5
"lib1","SARS-CoV-2","CGGGACTTTCTAGCAT",3,32.93,10.12,-0.65,0.09,2.74,1.01,0,">1 nonsynonymous","P96T Y143F",2
"lib1","SARS-CoV-2","CGGGAGAACTAGTTAA",3,55.85,10.27,-0.5,0.09,2.15,1,0,">1 nonsynonymous","I2G Y35M E76G",3
"lib1","SARS-CoV-2","CGGGAGATAATAAATA",5,0.41,NA,NA,NA,NA,NA,NA,"stop","V77F K114L L122Q Q163*",4
"lib1","SARS-CoV-2","CGGGAGATACAACCCC",2,8.26,10.51,-0.25,0.14,2.85,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGGGAGATATACTGCA",8,39.22,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A42T C49Q W106L K128S L162A P169W",6
"lib1","SARS-CoV-2","CGGGAGCTTCAATATC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","T63N Y93*",2
"lib1","SARS-CoV-2","CGGGAGGACACAAATC",9,215.06,10.46,-0.31,0.04,2.91,1.01,0,">1 nonsynonymous","L5F Y66I V173C",3
"lib1","SARS-CoV-2","CGGGAGGTAACTACTA",2,73.71,10.84,0.08,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGGAGTTGTAAATGT",3,53.77,6.09,-4.67,0.61,1.5,1.18,0.01,">1 nonsynonymous","R16L A89L N157R",3
"lib1","SARS-CoV-2","CGGGATAAGAAACATG",4,42.91,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","I2K K94L G117E G146D",4
"lib1","SARS-CoV-2","CGGGATAAGGGTGAAA",2,29.13,9.01,-1.76,0.19,1.68,1.09,0.01,">1 nonsynonymous","I88A L188M",2
"lib1","SARS-CoV-2","CGGGATAATGATAAAG",3,71.65,10.04,-0.72,0.08,2.69,1.02,0,">1 nonsynonymous","R16D Q144L",2
"lib1","SARS-CoV-2","CGGGATACATAAGAGT",12,110.49,9.59,-1.17,0.13,1.8,1.16,0.01,">1 nonsynonymous","L5H D90F R136L V153Q",4
"lib1","SARS-CoV-2","CGGGATATGAGGTTCC",6,42.35,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F8M N40P A89K",3
"lib1","SARS-CoV-2","CGGGATATTCAAGATA",1,11.88,10.72,-0.04,0.09,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGGATCATCCGTAAG",1,26.14,10.79,0.03,0.07,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGGATCCGACAAGAA",1,3.05,NA,NA,NA,NA,NA,NA,"stop","T15N V37L F44I P54Q F99* N120T",6
"lib1","SARS-CoV-2","CGGGATGAACTTGATT",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G I104H",2
"lib1","SARS-CoV-2","CGGGATTCAATAGCGC",4,1.17,NA,NA,NA,NA,NA,NA,"stop","L57*",1
"lib1","SARS-CoV-2","CGGGATTCAGCTTACG",2,51.65,9.65,-1.11,0.14,2.31,1.05,0.01,">1 nonsynonymous","C6E C61R T100N N120A",4
"lib1","SARS-CoV-2","CGGGATTGTACTCAAA",2,45.15,9.75,-1.01,0.09,2.79,1.09,0,">1 nonsynonymous","G9V G174W",2
"lib1","SARS-CoV-2","CGGGATTTCCCAAAAT",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43D K87F D137W",3
"lib1","SARS-CoV-2","CGGGATTTTGAGAGAC",16,102.2,7.6,-3.17,0.39,1.5,1.02,0.05,">1 nonsynonymous","P7L Y93T K114R E135P C158T",5
"lib1","SARS-CoV-2","CGGGCAAAGATAACGA",5,27.69,6.01,-4.75,1.16,1.5,1.23,0.04,"1 nonsynonymous","I88W",1
"lib1","SARS-CoV-2","CGGGCAACACGGCGAT",1,14.04,10.67,-0.1,0.07,2.97,1,0,">1 nonsynonymous","N1G P7Q T148D",3
"lib1","SARS-CoV-2","CGGGCATAACATTCTA",9,56.16,9.71,-1.06,0.13,1.89,1.09,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CGGGCATAGTACGTGC",2,34.56,10.67,-0.09,0.04,2.94,1.03,0,"1 nonsynonymous","D59C",1
"lib1","SARS-CoV-2","CGGGCATCTGACCGAC",3,57.47,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11S A33S D68V S113P T170N",5
"lib1","SARS-CoV-2","CGGGCCCAATGGAACC",2,6.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44N R179A",2
"lib1","SARS-CoV-2","CGGGCCGGAGCAAATA",2,21.98,10.37,-0.4,0.12,2.75,1.06,0,"1 nonsynonymous","D59P",1
"lib1","SARS-CoV-2","CGGGCGGCACAAAGAC",19,45.95,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A18S K48P D68L T85M D90P C102G",6
"lib1","SARS-CoV-2","CGGGCTACCAATTCCC",5,151.19,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T55L I142R Y178D",3
"lib1","SARS-CoV-2","CGGGCTATGTACCCGA",1,50.17,10.14,-0.63,0.08,2.71,1,0,">1 nonsynonymous","S29L G116V",2
"lib1","SARS-CoV-2","CGGGCTATTAACAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122M V173P V181G",3
"lib1","SARS-CoV-2","CGGGCTGGATACCTTC",9,109.5,6.12,-4.65,1.14,1.5,1.29,0.04,">1 nonsynonymous","N40Y Y91G N151L",3
"lib1","SARS-CoV-2","CGGGCTTAACACCAAA",2,35.33,10.79,0.03,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGGCTTACCAACAAC",1,71.01,10.27,-0.49,0.05,2.85,1.03,0,"1 nonsynonymous","K48F",1
"lib1","SARS-CoV-2","CGGGCTTGTACTCTGG",7,100.84,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K26G D98L Y165S",3
"lib1","SARS-CoV-2","CGGGCTTGTATTCCCA",1,32.59,10.51,-0.25,0.06,2.97,1,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","CGGGCTTTTCAGGGTG",6,1.78,NA,NA,NA,NA,NA,NA,"stop","S113* Q168A",2
"lib1","SARS-CoV-2","CGGGCTTTTGTAAGAA",3,75.82,10.61,-0.15,0.03,2.88,1.07,0,">1 nonsynonymous","N1L N151S",2
"lib1","SARS-CoV-2","CGGGGAAAGAGAATAT",14,187.34,6.35,-4.41,0.47,1.5,1.17,0.02,">1 nonsynonymous","T46Y K56T D68L G101L",4
"lib1","SARS-CoV-2","CGGGGAACGGAACCTA",3,37.11,10.6,-0.16,0.06,2.93,1.04,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","CGGGGAATGTCACTAA",1,6.72,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N24C R179G",2
"lib1","SARS-CoV-2","CGGGGACATAGAGTCC",1,34.82,10.55,-0.21,0.05,2.88,1.02,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","CGGGGACCAATGTTAG",5,31.94,10.85,0.09,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGGGACTAAGTAGGA",2,14.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9V C61R G83L I138G F167L",5
"lib1","SARS-CoV-2","CGGGGACTAGAATTAA",3,122.07,10.54,-0.22,0.06,2.92,1.02,0,">1 nonsynonymous","E10T T55G",2
"lib1","SARS-CoV-2","CGGGGAGACCATTCCG",4,16.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R179V V182D",2
"lib1","SARS-CoV-2","CGGGGAGCAATTACCT",2,19.93,10.74,-0.03,0.07,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGGGATGAACCGAAA",1,6.2,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I88R R136K S147F Y165G P169I V181K",6
"lib1","SARS-CoV-2","CGGGGCAGCCTAACAA",7,22.3,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","K56P T85K K94H L131E T140R",5
"lib1","SARS-CoV-2","CGGGGCTTTAATTACA",1,6.52,10.58,-0.19,0.15,2.66,1.05,0.02,">1 nonsynonymous","S43A E76D G174A T201G",4
"lib1","SARS-CoV-2","CGGGGGCAGATAATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S P7C Y121N T140A",4
"lib1","SARS-CoV-2","CGGGGGCAGGAAAATG",8,84,10,-0.77,0.08,2.16,1.01,0,">1 nonsynonymous","S41G L60E P96G T201R",4
"lib1","SARS-CoV-2","CGGGGGCGAATAATAT",6,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K C49Y",2
"lib1","SARS-CoV-2","CGGGGGTTTAATGATA",6,113.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31E R179G",2
"lib1","SARS-CoV-2","CGGGGTACTATATATA",3,130.41,10.17,-0.6,0.05,2.76,1,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","CGGGGTATGTGTAAAA",2,4.51,NA,NA,NA,NA,NA,NA,"stop","A18* E141N",2
"lib1","SARS-CoV-2","CGGGGTCAAAATCGTT",3,8.11,10.36,-0.41,0.1,2.96,1.07,0,">1 nonsynonymous","R16Q R78H K128F P149D",4
"lib1","SARS-CoV-2","CGGGGTCACCGACATA",6,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16T G116M",2
"lib1","SARS-CoV-2","CGGGGTGAACCCGATA",3,18.04,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A33T G86D G101C N107V T148I V181I H189F",7
"lib1","SARS-CoV-2","CGGGGTGTATGATCTG",2,29.55,10.4,-0.37,0.05,2.86,1.09,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","CGGGTAAGTTAAATAT",6,28.29,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N58S D97N V103L L162T",4
"lib1","SARS-CoV-2","CGGGTAATGCTAGTTA",1,9.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2N N64S G83D Y91Q C158H",5
"lib1","SARS-CoV-2","CGGGTACACCCTTCAA",1,11,7.9,-2.87,0.11,1.95,1.07,0,">1 nonsynonymous","G117C Y165W P197L",3
"lib1","SARS-CoV-2","CGGGTACACCGATGTA",7,124.72,10.8,0.04,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGGTCAAAACTACAT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A R25S N130I R179F",4
"lib1","SARS-CoV-2","CGGGTCAGAAAGATAA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R T148C N151Q",3
"lib1","SARS-CoV-2","CGGGTCATGATGGAAC",3,78.61,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P96L G166V P177E K198L",4
"lib1","SARS-CoV-2","CGGGTCCCCGAATGCG",1,17.85,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F12W L95P G101V W106R G166S",5
"lib1","SARS-CoV-2","CGGGTCCTACCTTTTT",6,59.75,10.46,-0.31,0.05,2.89,1.01,0,">1 nonsynonymous","L5W G9P Y35M S43K L57C",5
"lib1","SARS-CoV-2","CGGGTCTAGAAGTCTG",3,35.29,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","T85M A89S G116F E135V E141S Y165S",6
"lib1","SARS-CoV-2","CGGGTCTCCCTGTTCA",1,72.29,9.54,-1.22,0.1,1.97,1.09,0,">1 nonsynonymous","S19R L125F",2
"lib1","SARS-CoV-2","CGGGTCTCCGGAGTTA",5,54.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F47G I72T I142N F156S",4
"lib1","SARS-CoV-2","CGGGTGACCTAGACGA",6,71.86,9.35,-1.42,0.16,1.8,1.14,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","CGGGTGCGAGCTGCCC",6,74,7.6,-3.17,0.3,1.5,1.11,0.03,">1 nonsynonymous","E10S R25W T148R S184T",4
"lib1","SARS-CoV-2","CGGGTGCTAGCCGAAA",2,18.74,10.87,0.11,0.09,2.9,1.01,0,"1 nonsynonymous","G51K",1
"lib1","SARS-CoV-2","CGGGTTACATCCTACG",4,67.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64A A89I Y123G",3
"lib1","SARS-CoV-2","CGGGTTCGAGCCATTG",2,37.22,7.8,-2.97,0.26,1.5,1.05,0.03,">1 nonsynonymous","F47L I88V F134I",3
"lib1","SARS-CoV-2","CGGGTTCGTTTTCCCC",5,91.09,10.78,0.02,0.05,2.93,1.04,0,"1 nonsynonymous","S43L",1
"lib1","SARS-CoV-2","CGGGTTGGCTTCTAAT",4,66.21,10.64,-0.12,0.06,2.91,1.06,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","CGGTAAAACAATTAAA",7,9.55,6,-4.76,2,3,1.09,0,">1 nonsynonymous","C61T F99T W106R K128S",4
"lib1","SARS-CoV-2","CGGTAAAAGTTCACTT",2,49.18,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S53P G101C R136E G146Q",4
"lib1","SARS-CoV-2","CGGTAAAGAAAAAGAT",6,1.41,NA,NA,NA,NA,NA,NA,"stop","C6D K48C F99Y Y119L R127S Q168*",6
"lib1","SARS-CoV-2","CGGTAAAGCATCCGTC",5,122.14,9.87,-0.89,0.06,2.8,1.01,0,">1 nonsynonymous","G116N S129Y V173G",3
"lib1","SARS-CoV-2","CGGTAAAGCTGTGTAT",4,73.48,8.26,-2.51,0.17,2.28,1.13,0.01,">1 nonsynonymous","G9S P149S N157C",3
"lib1","SARS-CoV-2","CGGTAAATATTAATCC",3,69.48,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L5E Y35G G86D N130H",4
"lib1","SARS-CoV-2","CGGTAAATCAAAAGTA",1,11.99,10.76,0,0.06,2.99,1,0,">1 nonsynonymous","P7N K132L",2
"lib1","SARS-CoV-2","CGGTAAATCAAGAGGA",2,38.43,6.08,-4.68,0.96,1.5,1.18,0.02,">1 nonsynonymous","T3Q F44L K56L R136P",4
"lib1","SARS-CoV-2","CGGTAACCAAAGTGGA",7,4.43,NA,NA,NA,NA,NA,NA,"stop","C6T F99* C158R V173K",4
"lib1","SARS-CoV-2","CGGTAAGAAAATTTTT",5,128.25,10.89,0.13,0.07,2.84,1.1,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","CGGTAAGAACCCATTC",2,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26A F47G L57F V77Q D137N P161I P197K",7
"lib1","SARS-CoV-2","CGGTAAGATTTCGCTA",1,17.6,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y21L F62I L95S",3
"lib1","SARS-CoV-2","CGGTAAGGAACTGATT",5,29.97,9.23,-1.53,0.3,1.98,1.05,0.03,"1 nonsynonymous","P161C",1
"lib1","SARS-CoV-2","CGGTAAGGTTAAACGC",8,194.22,10.11,-0.65,0.04,2.9,1.02,0,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","CGGTAATAATTTTATG",4,86.52,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I2A Y35V Y91N L125F R179S",5
"lib1","SARS-CoV-2","CGGTAATCAGTTGAAC",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A T15I T85D",3
"lib1","SARS-CoV-2","CGGTAATCCACTCGAA",2,11.16,10.93,0.16,0.11,2.88,1.07,0.01,"1 nonsynonymous","A22S",1
"lib1","SARS-CoV-2","CGGTAATTTGTTTGCC",1,10.31,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","D98M S129L G166L Y178S",4
"lib1","SARS-CoV-2","CGGTACAATCTTGGGA",2,2.66,NA,NA,NA,NA,NA,NA,"stop","V52R P96T P197*",3
"lib1","SARS-CoV-2","CGGTACACCGTTCCAG",1,21.94,10.74,-0.03,0.13,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGTACAGTATTAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* G86E G152C",3
"lib1","SARS-CoV-2","CGGTACATCACCAGGG",5,86.99,9.71,-1.05,0.07,2.83,1.04,0,"1 nonsynonymous","N107E",1
"lib1","SARS-CoV-2","CGGTACCAAAAAGGGT",3,45.91,10.87,0.11,0.08,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGTACCAACCAATTC",2,5.97,6,-4.76,2,1.5,1.24,0.07,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","CGGTACCCTTAATGAG",2,49.1,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N40S R179G",2
"lib1","SARS-CoV-2","CGGTACCGCAAGTACC",1,33.29,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N64L F70L L131N L162T",4
"lib1","SARS-CoV-2","CGGTACCTCAGTAGGT",2,5.21,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","R25M F44C D97L N107Y E186V",5
"lib1","SARS-CoV-2","CGGTACGTGGGGCTAA",2,10.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R K132V E154F",3
"lib1","SARS-CoV-2","CGGTACGTTCAAATAC",4,39.75,8.25,-2.51,0.21,2.16,1.09,0.02,">1 nonsynonymous","E154W G166L",2
"lib1","SARS-CoV-2","CGGTACTCTTATGTGC",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H D68R",2
"lib1","SARS-CoV-2","CGGTACTGATAAGTCC",1,0.79,NA,NA,NA,NA,NA,NA,"stop","W106L D112* N157L T201M",4
"lib1","SARS-CoV-2","CGGTACTGCGAAACAA",4,75.23,10.18,-0.59,0.06,2.85,1.01,0,">1 nonsynonymous","A33E D97L",2
"lib1","SARS-CoV-2","CGGTACTTTAAAAGTA",1,6.56,9.95,-0.81,0.19,2.86,1.09,0.01,">1 nonsynonymous","T100H Y175H",2
"lib1","SARS-CoV-2","CGGTAGACTAACGGTA",4,66.32,10.7,-0.06,0.04,2.94,1.04,0,">1 nonsynonymous","T55H Q84T",2
"lib1","SARS-CoV-2","CGGTAGTATGTTCTAA",7,110.85,10.17,-0.6,0.07,2.72,1,0,">1 nonsynonymous","L57H G152N",2
"lib1","SARS-CoV-2","CGGTATAAAAAGATTA",12,4.06,NA,NA,NA,NA,NA,NA,"stop","K128* F134P",2
"lib1","SARS-CoV-2","CGGTATACCTAATACT",9,183.25,10.43,-0.33,0.04,2.93,1.03,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","CGGTATACCTCTAGTG",2,27.56,6.06,-4.7,1.45,1.5,1.19,0.06,">1 nonsynonymous","I80M T100I R179D",3
"lib1","SARS-CoV-2","CGGTATAGCTTGTTGG",2,72.77,9.36,-1.41,0.07,2.88,1.07,0,">1 nonsynonymous","G51N Y119M",2
"lib1","SARS-CoV-2","CGGTATCGCTAGCATT",2,21.13,6.41,-4.35,0.6,1.5,1.24,0.03,">1 nonsynonymous","S45I F70M S147F",3
"lib1","SARS-CoV-2","CGGTATGCCTAGTAAA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","A42* I80E E154V Y178I",4
"lib1","SARS-CoV-2","CGGTATGTAACGGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","CGGTATGTGATATGTC",12,57.03,6,-4.76,1.87,3,1.11,0,">1 nonsynonymous","G86S K94E T100Y V115L G146K Q168R",6
"lib1","SARS-CoV-2","CGGTATTCCTCTCGAT",1,21.1,8.38,-2.38,0.27,1.8,1.13,0.03,">1 nonsynonymous","T148R Y165C",2
"lib1","SARS-CoV-2","CGGTATTTTGACAAGT",5,31.73,7.29,-3.47,0.54,1.5,1,0.08,">1 nonsynonymous","F17N Y175I S184Y",3
"lib1","SARS-CoV-2","CGGTCAAAGGAGATGA",10,2.57,NA,NA,NA,NA,NA,NA,"stop","Y119* E186T",2
"lib1","SARS-CoV-2","CGGTCAAATCCGGTGA",1,52.93,7.79,-2.97,0.3,1.5,1.06,0.03,">1 nonsynonymous","R25V I138N",2
"lib1","SARS-CoV-2","CGGTCAACGTCCCCTA",1,34,9.83,-0.94,0.16,2.36,1,0.01,">1 nonsynonymous","T3Y D90A F160L",3
"lib1","SARS-CoV-2","CGGTCAACTTATAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K A89Q Y119S G174Y",4
"lib1","SARS-CoV-2","CGGTCAATAAACCATA",6,16.79,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V32T F62Y G83S G86C K94D Y175W",6
"lib1","SARS-CoV-2","CGGTCAATATCAAAGA",2,58.16,9.11,-1.65,0.18,1.5,1.11,0.01,">1 nonsynonymous","N4V A14L V103I K198R",4
"lib1","SARS-CoV-2","CGGTCAATGGTTTACA",2,6.32,10.63,-0.14,0.39,2.44,1.27,0.04,">1 nonsynonymous","C6S L122K",2
"lib1","SARS-CoV-2","CGGTCAATGTCACACA",4,80.52,10.49,-0.27,0.05,2.92,1.02,0,"1 nonsynonymous","P169V",1
"lib1","SARS-CoV-2","CGGTCACTAACACACT",8,106.66,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8S S45P Y66R",3
"lib1","SARS-CoV-2","CGGTCACTCGGAAATG",4,84.61,10.67,-0.09,0.06,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CGGTCAGACAACGGCG",3,27.46,7.13,-3.63,0.46,1.5,1.04,0.05,">1 nonsynonymous","R16F T85S N92S W106S Y143S",5
"lib1","SARS-CoV-2","CGGTCAGAGATCAAGG",8,55.29,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D68L V77P D98W Y159Q Y178F",5
"lib1","SARS-CoV-2","CGGTCAGTATTTAACT",2,1.22,NA,NA,NA,NA,NA,NA,"stop","F12L I28E Y121*",3
"lib1","SARS-CoV-2","CGGTCATCTTACAACT",2,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C R127I",2
"lib1","SARS-CoV-2","CGGTCATTGTGTCATT",2,0.09,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CGGTCCAATGTCAATG",4,124.51,9.17,-1.59,0.08,2.02,1.12,0,">1 nonsynonymous","S36F N107Q",2
"lib1","SARS-CoV-2","CGGTCCCAATTTTGCG",3,42.16,10.31,-0.45,0.08,2.92,1.02,0,">1 nonsynonymous","L60Q K87P K132I",3
"lib1","SARS-CoV-2","CGGTCCTTAGCACTGG",2,1,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","CGGTCGAAGGCATAAA",2,38.93,10.24,-0.52,0.09,2.7,1.04,0,">1 nonsynonymous","A42D R127S",2
"lib1","SARS-CoV-2","CGGTCGAATAGAACAC",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F44L I88T I104A Y159D",5
"lib1","SARS-CoV-2","CGGTCGAGCCCGCCAA",3,1.44,NA,NA,NA,NA,NA,NA,"stop","K56S I138S G155*",3
"lib1","SARS-CoV-2","CGGTCGTCGCCGACTA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","P7E A14C S36E C61Y V103* T201R",6
"lib1","SARS-CoV-2","CGGTCGTTCTAGCTAT",1,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","CGGTCTACAAATGTAA",8,151.91,9.95,-0.82,0.1,2.21,1.05,0,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","CGGTCTACCTCTTTAA",13,188.9,8.74,-2.02,0.14,1.76,1.16,0.01,">1 nonsynonymous","Y123N G152M",2
"lib1","SARS-CoV-2","CGGTCTATTGTCTAAA",7,65.16,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25G G51R F62C D68L P149F",5
"lib1","SARS-CoV-2","CGGTCTCAATAACCAA",8,23.68,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","P96M R127S",2
"lib1","SARS-CoV-2","CGGTCTGATGAGTACG",2,70.75,10.79,0.02,0.06,2.89,1.06,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","CGGTCTGTGATCTATA",5,1.84,NA,NA,NA,NA,NA,NA,"stop","L5I P82* S139C P197Q",4
"lib1","SARS-CoV-2","CGGTCTGTTAAAATAA",16,4.74,NA,NA,NA,NA,NA,NA,"stop","N4Y F99K S139*",3
"lib1","SARS-CoV-2","CGGTGAACTTGTGACG",1,30.68,10.74,-0.03,0.11,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGTGAAGAGTTTAAC",1,2.55,NA,NA,NA,NA,NA,NA,"stop","Y93I V103A C150*",3
"lib1","SARS-CoV-2","CGGTGAAGGTAACCGC",2,93.61,10.57,-0.19,0.06,2.94,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","CGGTGAAGTCCAATGA",2,0,NA,NA,NA,NA,NA,NA,"stop","K56S W106L C150R F156* H189I",5
"lib1","SARS-CoV-2","CGGTGAATAAGCCCTG",1,0.2,NA,NA,NA,NA,NA,NA,"stop","D59A A81* R179N S200L",4
"lib1","SARS-CoV-2","CGGTGACACTCTCAAT",1,11.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T100P P169S",2
"lib1","SARS-CoV-2","CGGTGACATAAAGCTA",4,90.56,10.73,-0.03,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGTGACGTTATTGAC",2,10.41,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N92T S184N",2
"lib1","SARS-CoV-2","CGGTGACTAATGTAGT",1,30.47,9.88,-0.88,0.14,2.13,1.21,0.01,">1 nonsynonymous","V11P A42Q T55N",3
"lib1","SARS-CoV-2","CGGTGATACCCTTGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F G51R D98K Y165I",4
"lib1","SARS-CoV-2","CGGTGATGCGGCAATA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","N4S P7*",2
"lib1","SARS-CoV-2","CGGTGATTTTGATACG",1,12.16,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E76T Y91V I104R R127G",4
"lib1","SARS-CoV-2","CGGTGCAATTCCTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2L V11* Y159G",3
"lib1","SARS-CoV-2","CGGTGCACAGATTCGC",2,24.36,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N1L V11G R25P K56Y Y178C",5
"lib1","SARS-CoV-2","CGGTGCACCTCAACAG",4,0.81,NA,NA,NA,NA,NA,NA,"stop","L5* G83A F99N",3
"lib1","SARS-CoV-2","CGGTGCTAAAATTACC",3,30.85,10.87,0.11,0.08,2.88,1.08,0,">1 nonsynonymous","V32W T201P",2
"lib1","SARS-CoV-2","CGGTGCTACCTAGGTG",2,31.47,6,-4.76,1.01,3,1.19,0.01,">1 nonsynonymous","V20P T46N D97R V103S R127K Y178T",6
"lib1","SARS-CoV-2","CGGTGCTTAACCCACC",3,55.88,10.34,-0.43,0.09,2.73,1.1,0,">1 nonsynonymous","I2K V52I D90S D97T",4
"lib1","SARS-CoV-2","CGGTGGCAGGTAATTA",2,56.57,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G116R F126S T140L T148A G166I G172E Y178S",7
"lib1","SARS-CoV-2","CGGTGGCCTTTTAACG",1,24.48,10.73,-0.03,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGTGGGGAATTATGA",7,160.77,10.79,0.02,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGGTGGTACATGTAGA",11,130.23,8.17,-2.59,0.21,1.67,1.16,0.02,">1 nonsynonymous","N4R A14N S29W G155P K198M",5
"lib1","SARS-CoV-2","CGGTGTATCTCCAGAT",13,99.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37D I88G C102R",3
"lib1","SARS-CoV-2","CGGTGTCAGAATAAAA",1,27.42,10.66,-0.11,0.07,2.89,1.07,0,"1 nonsynonymous","D75E",1
"lib1","SARS-CoV-2","CGGTGTCCGAGTTAAC",1,15.96,9.63,-1.14,0.19,1.69,1.18,0.02,">1 nonsynonymous","T46I L60R V65A T140F",4
"lib1","SARS-CoV-2","CGGTGTTATCTTTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T D112Q K198W",3
"lib1","SARS-CoV-2","CGGTGTTGGACCTATA",10,99.87,10.19,-0.57,0.05,2.82,1.07,0,">1 nonsynonymous","T100I N107G",2
"lib1","SARS-CoV-2","CGGTTAACGTATAAAT",1,36.87,7.94,-2.82,0.15,1.82,1.08,0.01,">1 nonsynonymous","C158N T201E",2
"lib1","SARS-CoV-2","CGGTTAACTGGCAGAT",1,25.5,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A33K A89F Y119G F160W",4
"lib1","SARS-CoV-2","CGGTTACAACTAATGA",10,62.39,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","D75G A89L",2
"lib1","SARS-CoV-2","CGGTTACACTTCTGTA",2,24,6,-4.76,2,3,1.09,0,">1 nonsynonymous","C6S C61P K94T V180Q",4
"lib1","SARS-CoV-2","CGGTTACATTTGACTT",3,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S S113V S129R",3
"lib1","SARS-CoV-2","CGGTTACCAGATGCAT",3,111.02,6,-4.76,1.35,1.5,1.12,0.01,">1 nonsynonymous","E10T F44E Y50L Y121L",4
"lib1","SARS-CoV-2","CGGTTACCCACCTTGA",2,83.63,10.2,-0.56,0.04,2.95,1,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","CGGTTACTAATTGGTT",2,12.9,8.65,-2.11,0.2,1.52,1.1,0.02,">1 nonsynonymous","V103L K198V",2
"lib1","SARS-CoV-2","CGGTTACTATGATTCG",4,140.24,10.05,-0.72,0.08,2.32,1.01,0,"1 nonsynonymous","Y178R",1
"lib1","SARS-CoV-2","CGGTTAGGTCTATTTG",13,44.24,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","F99T E141Q",2
"lib1","SARS-CoV-2","CGGTTATATTTGTCAG",4,86.51,10.25,-0.51,0.05,2.87,1.02,0,">1 nonsynonymous","Y35H T193S",2
"lib1","SARS-CoV-2","CGGTTCATTGACACAA",3,1.56,NA,NA,NA,NA,NA,NA,"stop","Y39* A81Y K87S Q168E",4
"lib1","SARS-CoV-2","CGGTTCCACCAGTTAC",13,130.57,10.6,-0.17,0.05,2.87,1.06,0,">1 nonsynonymous","V32H P149E",2
"lib1","SARS-CoV-2","CGGTTCCACTGGGTAC",1,23.54,10.27,-0.5,0.08,2.85,1,0,">1 nonsynonymous","S36Y G83H I104F G116M",4
"lib1","SARS-CoV-2","CGGTTCCGAACGGCTA",8,113.98,6.77,-3.99,0.2,1.5,1.14,0.01,">1 nonsynonymous","C61E A81S A145D N157K V173I H189N",6
"lib1","SARS-CoV-2","CGGTTCGATGGAGAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* G51Y N64S V77R A89H",5
"lib1","SARS-CoV-2","CGGTTCGCATGGCGTG",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T Q79P G86E Y165D",4
"lib1","SARS-CoV-2","CGGTTCGCTAATTAAG",6,146.13,10.75,-0.01,0.05,2.93,1.03,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","CGGTTCGGCGTCCTAA",3,9.46,NA,NA,NA,NA,NA,NA,"stop","T63N R136*",2
"lib1","SARS-CoV-2","CGGTTCGTAGGTCTTA",3,6.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C G74L V103I",3
"lib1","SARS-CoV-2","CGGTTCTACTCTCATA",5,83.14,10.71,-0.05,0.04,2.9,1.04,0,"1 nonsynonymous","V65G",1
"lib1","SARS-CoV-2","CGGTTGAAACGACAAA",6,89.37,7.47,-3.3,0.3,1.5,1.1,0.02,">1 nonsynonymous","C61L Y91S N110C",3
"lib1","SARS-CoV-2","CGGTTGAACAATGATT",4,67.1,10.66,-0.11,0.06,2.9,1.08,0,"1 nonsynonymous","K128M",1
"lib1","SARS-CoV-2","CGGTTGAATTGTGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D34P D68*",2
"lib1","SARS-CoV-2","CGGTTGAGAATTTGAA",3,37.45,6,-4.76,1.19,2.19,1.15,0,">1 nonsynonymous","C61N T100F F167S",3
"lib1","SARS-CoV-2","CGGTTGAGGACGGGCT",15,77.63,6.01,-4.75,1.07,1.5,1.18,0.02,">1 nonsynonymous","E10V P96L",2
"lib1","SARS-CoV-2","CGGTTGCAAATCCGTA",4,117.44,10.46,-0.3,0.06,2.85,1.08,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","CGGTTGCAAATGAAGT",5,52.8,6.05,-4.71,0.67,1.5,1.13,0.01,">1 nonsynonymous","F17G A89V T140V H189V",4
"lib1","SARS-CoV-2","CGGTTGCAACGTATTA",1,15.36,7.28,-3.49,0.38,1.5,1,0.06,">1 nonsynonymous","G9R A89I A105L L187P P197W",5
"lib1","SARS-CoV-2","CGGTTGCATAATTCAA",4,33.16,8.55,-2.21,0.16,1.97,1.11,0.01,">1 nonsynonymous","E10Q S41V F156S E186L",4
"lib1","SARS-CoV-2","CGGTTGCCTGGTACTT",10,47.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11T A42S K94F N118V",4
"lib1","SARS-CoV-2","CGGTTGCGTGATAGCC",1,16.13,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9C V103F K128I C150S",4
"lib1","SARS-CoV-2","CGGTTGGTAAGAAATG",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V G83M L122T P161L G174P",5
"lib1","SARS-CoV-2","CGGTTTAAAACATATG",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C N118R",2
"lib1","SARS-CoV-2","CGGTTTAACTCAGTAA",1,19.81,6,-4.76,2,3,1.2,0,">1 nonsynonymous","A14C C49Y A105L E154V",4
"lib1","SARS-CoV-2","CGGTTTAATCATCGAT",5,25.44,10.65,-0.11,0.06,2.91,1,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","CGGTTTAGAAACGGAG",1,18.05,10.8,0.03,0.08,2.9,1.06,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","CGGTTTATTTCCCAGG",22,186.77,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A33R G74M A105L N157M",4
"lib1","SARS-CoV-2","CGGTTTCAATGCGTAA",1,41.29,10.83,0.06,0.07,2.97,1.01,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","CGGTTTCTAGGAAACG",11,5.78,NA,NA,NA,NA,NA,NA,"stop","N4K Y93C T100D W106*",4
"lib1","SARS-CoV-2","CGGTTTGACTCGAGAA",2,34.62,9.43,-1.33,0.1,1.9,1.12,0.01,">1 nonsynonymous","N4L F134I",2
"lib1","SARS-CoV-2","CGGTTTGAGACACCCT",1,14.36,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","F12L Y50C F160I F167L",4
"lib1","SARS-CoV-2","CGGTTTGCGCAGACAG",4,32.44,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Q176R V182P",2
"lib1","SARS-CoV-2","CGGTTTGTAAAACTTT",4,1.15,NA,NA,NA,NA,NA,NA,"stop","G9W T85C S113* T201M",4
"lib1","SARS-CoV-2","CGGTTTGTAAGTAATA",4,64.92,9.5,-1.26,0.12,1.82,1.07,0,"1 nonsynonymous","V77Y",1
"lib1","SARS-CoV-2","CGGTTTTAATGCCGCA",3,55.51,7.35,-3.41,0.39,1.5,1.14,0.04,">1 nonsynonymous","C6H S113V",2
"lib1","SARS-CoV-2","CGGTTTTGAACTTCAC",5,49.81,10.75,-0.02,0.07,2.91,1.06,0,">1 nonsynonymous","N64V T100M",2
"lib1","SARS-CoV-2","CGGTTTTTTCAAAGTT",3,55.27,10.05,-0.72,0.07,2.48,1.07,0,">1 nonsynonymous","E10V R16V K26M C61G",4
"lib1","SARS-CoV-2","CGTAAAAAAACCCCCT",2,23.83,10.77,0.01,0.07,2.92,1.06,0,"1 nonsynonymous","K198C",1
"lib1","SARS-CoV-2","CGTAAAAAACCCCGTA",1,1.71,NA,NA,NA,NA,NA,NA,"stop","I28M S36* G86R W106R Y178A",5
"lib1","SARS-CoV-2","CGTAAAAAACTGATGA",1,61.54,10.17,-0.6,0.08,2.74,1.02,0,"1 nonsynonymous","S69R",1
"lib1","SARS-CoV-2","CGTAAAAAATAGCAAG",6,8.33,6.26,-4.51,0.96,1.5,1.12,0.03,">1 nonsynonymous","N4W N13R C61T K87E G146W N151V",6
"lib1","SARS-CoV-2","CGTAAAAACATATGAC",4,76.26,7.13,-3.64,0.37,1.5,1.06,0.04,">1 nonsynonymous","S53L Y93G Q144S Q176R",4
"lib1","SARS-CoV-2","CGTAAAAAGATGTAAT",5,39.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S43R V71Y I88N",3
"lib1","SARS-CoV-2","CGTAAAACACCAATTA",3,7.3,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S45V C61D I80L Q84V G146S",5
"lib1","SARS-CoV-2","CGTAAAAGATACCACT",7,62.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A22G G101L T201P",3
"lib1","SARS-CoV-2","CGTAAAAGCAGACTGA",4,91.02,10.67,-0.1,0.04,2.96,1,0,">1 nonsynonymous","Y39R K56T D90S",3
"lib1","SARS-CoV-2","CGTAAAATAAATATCG",8,26.28,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P7T T63L I88D T201V",4
"lib1","SARS-CoV-2","CGTAAAATAATAATAC",3,29.34,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4R G51P L95M N107G F134Q Y143I",6
"lib1","SARS-CoV-2","CGTAAAATTCTCTCTT",7,145.29,10.6,-0.17,0.04,2.87,1.06,0,">1 nonsynonymous","Y35M S41Y",2
"lib1","SARS-CoV-2","CGTAAACAAAGCCGCA",2,66.27,10.02,-0.75,0.13,2.11,1.02,0.01,">1 nonsynonymous","I28V N30K F47I S129K E154S",5
"lib1","SARS-CoV-2","CGTAAACAGTCATTCC",9,122.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K94N G117N R127G K198M",4
"lib1","SARS-CoV-2","CGTAAACCCTTTCACA",3,10.87,6,-4.76,2,1.5,1.05,0.03,">1 nonsynonymous","F8Y A14L V20L S53Q",4
"lib1","SARS-CoV-2","CGTAAACGCATGAAAA",2,28.61,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L60T V153M R179P",3
"lib1","SARS-CoV-2","CGTAAACGCTTGCTCG",6,82.34,10.84,0.07,0.08,2.91,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CGTAAACGGGCATAGT",9,0.6,NA,NA,NA,NA,NA,NA,"stop","L38T N64G I88* I138P",4
"lib1","SARS-CoV-2","CGTAAACTGAGACTCC",17,101.89,6.1,-4.66,0.64,1.5,1.2,0.01,">1 nonsynonymous","A89R D98I N118F R127S",4
"lib1","SARS-CoV-2","CGTAAACTTGTGAAAT",9,19.26,6.43,-4.34,0.71,1.5,1.09,0.05,"1 nonsynonymous","V181P",1
"lib1","SARS-CoV-2","CGTAAACTTTTAGCCA",1,34.4,9.74,-1.02,0.03,2.84,1.12,0,">1 nonsynonymous","S53C D59E K128G G174R",4
"lib1","SARS-CoV-2","CGTAAAGACCCCTCAG",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T V77S I104R G146Y N151M",5
"lib1","SARS-CoV-2","CGTAAAGATAGGGAAT",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K K87R G101A",3
"lib1","SARS-CoV-2","CGTAAAGCAGTCAGGT",8,116.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12G N40L D68H",3
"lib1","SARS-CoV-2","CGTAAAGGGTAGGCTA",1,35.96,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28K K87D D97L F126N T148H G155Y Y165M",7
"lib1","SARS-CoV-2","CGTAAAGTAAAGAAAC",2,13.74,10.74,-0.03,0.14,2.97,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGTAAAGTACTGAAAC",3,27.78,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V20R V37F L162F",3
"lib1","SARS-CoV-2","CGTAAATAGGCGTGTT",1,3.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","CGTAAATATTTACCCT",2,18.16,10.74,-0.02,0.11,2.84,1.12,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CGTAAATCATTAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12P T46V F70S A81T Q84C P96* Q168R",7
"lib1","SARS-CoV-2","CGTAAATGACGCACAG",6,86.72,10.4,-0.37,0.06,2.85,1,0,">1 nonsynonymous","E141I F160P",2
"lib1","SARS-CoV-2","CGTAAATGGGCGTAAT",1,0.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","CGTAAATTAAAGTAAA",1,28.74,10.74,-0.02,0.08,2.91,1.08,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","CGTAAATTTCTCGATT",1,3.31,NA,NA,NA,NA,NA,NA,"stop","T15* K87S Y119C",3
"lib1","SARS-CoV-2","CGTAAATTTTAAACCT",1,33.64,10.52,-0.24,0.09,2.93,1,0,">1 nonsynonymous","D98I V173I",2
"lib1","SARS-CoV-2","CGTAACAAAAATCTTA",6,0.97,NA,NA,NA,NA,NA,NA,"stop","A18M A33* V77G P96Q T148I K199I",6
"lib1","SARS-CoV-2","CGTAACAAAACAACGA",4,54.76,10.69,-0.07,0.06,2.84,1.06,0,">1 nonsynonymous","N120I S200V",2
"lib1","SARS-CoV-2","CGTAACAACAAGCTAT",5,4.23,NA,NA,NA,NA,NA,NA,"stop","N92S R124* E141S",3
"lib1","SARS-CoV-2","CGTAACAACGCTCCAA",2,14.05,10.6,-0.16,0.1,2.94,1.05,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","CGTAACAATCTTGTGA",1,21.39,6,-4.76,0.68,1.5,1.15,0.01,">1 nonsynonymous","A18T F44K A89G D98W P161L",5
"lib1","SARS-CoV-2","CGTAACACTGATATAC",4,124.67,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N120L P133A Y175I",3
"lib1","SARS-CoV-2","CGTAACAGAAGCTTTC",4,110.9,10.18,-0.58,0.07,2.51,1.04,0,"1 nonsynonymous","A81N",1
"lib1","SARS-CoV-2","CGTAACAGACCCATGC",2,25.08,10.64,-0.12,0.12,2.55,1.47,0.01,">1 nonsynonymous","L5T Y39K T55A I142V",4
"lib1","SARS-CoV-2","CGTAACAGACTAATTA",8,125.12,6,-4.76,1.21,1.5,1.25,0.03,">1 nonsynonymous","G9D C158P",2
"lib1","SARS-CoV-2","CGTAACAGACTCTAAA",15,275.24,10.17,-0.6,0.05,2.81,1.02,0,">1 nonsynonymous","N4Q S41C F47I K56R C61F S200I",6
"lib1","SARS-CoV-2","CGTAACATTAGAGCAA",4,84.49,9.95,-0.82,0.05,2.96,1.01,0,">1 nonsynonymous","G9Y V115C",2
"lib1","SARS-CoV-2","CGTAACCAAGGGATGC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","CGTAACCACAATACAA",9,5.79,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","D34Y L57S D97Y Y123T",4
"lib1","SARS-CoV-2","CGTAACCGGCAGTCAC",1,19.31,9.83,-0.93,0.13,2.6,1.15,0.01,">1 nonsynonymous","Y123E K198G",2
"lib1","SARS-CoV-2","CGTAACCGTGAGGATT",3,74.11,10.77,0,0.06,2.89,1.07,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","CGTAACCTACGATATT",6,141.49,10.75,-0.02,0.06,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CGTAACCTGTGAGAGA",4,52.83,9.78,-0.98,0.15,2.03,1.04,0.01,">1 nonsynonymous","C6I D90L",2
"lib1","SARS-CoV-2","CGTAACGATGGGATAA",1,7.63,10.86,0.09,0.14,2.89,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGTAACGCGCACTATG",2,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A F47L T85W",3
"lib1","SARS-CoV-2","CGTAACGTATCATGCT",6,86.69,9.86,-0.9,0.13,1.81,1.1,0.01,">1 nonsynonymous","G9K D112I S147I",3
"lib1","SARS-CoV-2","CGTAACTACCGCCGTT",2,76.31,9.48,-1.28,0.06,2.8,1.05,0,">1 nonsynonymous","R73L N110A",2
"lib1","SARS-CoV-2","CGTAACTGTATCATAA",3,12.13,9.86,-0.9,0.24,2.45,1.17,0.01,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","CGTAACTTAAGAACCT",7,121.88,8.34,-2.42,0.13,2.09,1.14,0.01,">1 nonsynonymous","T15R D59E Y143C",3
"lib1","SARS-CoV-2","CGTAACTTCACAATGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I L95H A105R",3
"lib1","SARS-CoV-2","CGTAAGAAACTTAACA",10,23.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F17M D34P N64T D98H G146D",5
"lib1","SARS-CoV-2","CGTAAGAGAAGTACCA",1,52.25,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12L R127T I142K S184Y",4
"lib1","SARS-CoV-2","CGTAAGAGTACACAAA",7,123.07,10.04,-0.73,0.07,2.51,1.05,0,">1 nonsynonymous","D34V V153F T201I",3
"lib1","SARS-CoV-2","CGTAAGATAGATTCTG",3,17.89,8.56,-2.2,0.16,1.98,1.2,0.01,">1 nonsynonymous","N64M R179T P197V",3
"lib1","SARS-CoV-2","CGTAAGCAAAGGCCGG",5,66.93,8.38,-2.38,0.24,1.5,1.17,0.02,">1 nonsynonymous","V11S K94V L122R V153T",4
"lib1","SARS-CoV-2","CGTAAGCCAAAAAAAA",1,16.59,6.81,-3.95,0.27,1.77,1.14,0.02,">1 nonsynonymous","L57A D98F Q144M",3
"lib1","SARS-CoV-2","CGTAAGCGAGTAGCCT",6,186.26,10.59,-0.17,0.04,2.92,1.04,0,">1 nonsynonymous","F8L A14S",2
"lib1","SARS-CoV-2","CGTAAGCGTACACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40V K128P S139*",3
"lib1","SARS-CoV-2","CGTAAGGCGTGCACAA",1,9.13,8.49,-2.28,0.3,1.69,1.14,0.04,">1 nonsynonymous","K128S I138V G146Q T170R",4
"lib1","SARS-CoV-2","CGTAAGGGAACTAATA",5,26.3,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6W F17L L60K D112W K114E N118R C158W",7
"lib1","SARS-CoV-2","CGTAAGGTATGGTAAA",6,48.85,9.87,-0.9,0.14,1.89,1.09,0.01,"1 nonsynonymous","S69K",1
"lib1","SARS-CoV-2","CGTAAGTGCTACCCAA",12,79.63,8.14,-2.62,0.18,1.85,1.12,0.01,">1 nonsynonymous","C61V F126Y E135A A145C",4
"lib1","SARS-CoV-2","CGTAATAAGTAAGGAA",2,18.88,6.52,-4.24,0.75,1.5,1.12,0.06,">1 nonsynonymous","T3I G9L T55K T85M G117T K132L Y143E A190H",8
"lib1","SARS-CoV-2","CGTAATAATATGCTCA",4,1.19,NA,NA,NA,NA,NA,NA,"stop","N64T G174*",2
"lib1","SARS-CoV-2","CGTAATAATTGCAAAT",10,28.78,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K87E L95E S113R P133F",4
"lib1","SARS-CoV-2","CGTAATACAAACTAAA",5,193.82,10.56,-0.2,0.03,2.96,1.01,0,">1 nonsynonymous","Y39M G174S",2
"lib1","SARS-CoV-2","CGTAATACCGCATCAA",10,0.46,NA,NA,NA,NA,NA,NA,"stop","A14K L95*",2
"lib1","SARS-CoV-2","CGTAATAGAATTACAA",4,34.64,10.72,-0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTAATAGATAAAGCC",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107L G152P",2
"lib1","SARS-CoV-2","CGTAATAGATTTTAGT",1,34.25,8.33,-2.43,0.12,2.56,1.08,0,">1 nonsynonymous","S113R E154V A192E T201P",4
"lib1","SARS-CoV-2","CGTAATAGTATTACGC",4,140.07,10.55,-0.21,0.03,2.91,1.02,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","CGTAATATAAAACTCT",2,64.56,10.73,-0.03,0.04,2.96,1,0,">1 nonsynonymous","K48L T63S",2
"lib1","SARS-CoV-2","CGTAATATATCGTCAC",2,34.07,10.18,-0.58,0.04,2.88,1.05,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","CGTAATATCAATACAC",1,38.06,10.49,-0.27,0.12,2.76,1.15,0.01,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","CGTAATCCAAAATAAC",2,13.44,9.76,-1.01,0.32,1.5,1,0.05,">1 nonsynonymous","C102A G174N",2
"lib1","SARS-CoV-2","CGTAATCCCATACGAA",1,21.18,6.79,-3.97,0.49,1.59,1.13,0.03,">1 nonsynonymous","G9V C49T Y143I",3
"lib1","SARS-CoV-2","CGTAATCCGTCAAGCT",3,60.71,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S36H I80Q",2
"lib1","SARS-CoV-2","CGTAATCCTCAGACAG",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y35L L57I L122* Q144R P177L",5
"lib1","SARS-CoV-2","CGTAATCGAAAAAGAT",4,52.6,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N24T D59G L95G V103L P149T",5
"lib1","SARS-CoV-2","CGTAATCTCTACCACG",2,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N T85M A105M F156S",4
"lib1","SARS-CoV-2","CGTAATCTCTTAATCA",13,183.6,8.71,-2.05,0.08,2.64,1.09,0,">1 nonsynonymous","R16T V32A Y91W Q168M",4
"lib1","SARS-CoV-2","CGTAATCTTTAACGAA",9,82.26,6.1,-4.66,1.03,1.5,1.16,0.03,">1 nonsynonymous","D34R F47G E76T Y119G N151Y",5
"lib1","SARS-CoV-2","CGTAATGACTGAGAAT",2,8.22,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y39M G86A L95Q R124F F134E I142Y T201P",7
"lib1","SARS-CoV-2","CGTAATGATGTGGAAA",2,16.45,10.36,-0.4,0.35,2.68,1.02,0.03,">1 nonsynonymous","N120L S184M",2
"lib1","SARS-CoV-2","CGTAATGCGGATGCCT",7,50.29,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9I F167A",2
"lib1","SARS-CoV-2","CGTAATGCTGTTAATT",4,52.16,10.75,-0.02,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTAATGTATATCTAA",2,44.11,10.8,0.04,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CGTAATGTATTCCTGG",1,27.58,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I88L L95H G116R P149T F156T",5
"lib1","SARS-CoV-2","CGTAATGTCAATGACA",1,68.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63Y C158Y T201G",3
"lib1","SARS-CoV-2","CGTAATGTGAGAACCT",4,81.04,8.7,-2.07,0.19,1.5,1.14,0.01,">1 nonsynonymous","I28L V77E I142M",3
"lib1","SARS-CoV-2","CGTAATTAGTAAGTGT",1,1.5,NA,NA,NA,NA,NA,NA,"stop","V11G V37A V77L V180S T201*",5
"lib1","SARS-CoV-2","CGTAATTCAGTAAGCT",3,53.88,9.95,-0.82,0.1,2.33,1.08,0,">1 nonsynonymous","C6N N13F",2
"lib1","SARS-CoV-2","CGTAATTCGAACAATA",6,17.33,6,-4.76,2,1.5,1.33,0.08,">1 nonsynonymous","D68L I104L V173S",3
"lib1","SARS-CoV-2","CGTACAAAAAGTATAA",3,45.44,6.91,-3.86,0.31,1.5,1.11,0.02,">1 nonsynonymous","Q163L R179M S200E",3
"lib1","SARS-CoV-2","CGTACAACACAAGAAA",15,162.98,10.32,-0.44,0.04,2.79,1.05,0,">1 nonsynonymous","S29H K94C",2
"lib1","SARS-CoV-2","CGTACAACCTCAGTTC",5,65.35,8.05,-2.72,0.2,1.5,1.14,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","CGTACAAGAATCTGTT",4,12.38,6.04,-4.72,1.35,1.5,1.25,0.03,">1 nonsynonymous","Y66E T100W S147F N171S",4
"lib1","SARS-CoV-2","CGTACAAGTCAAGAGC",2,121.33,9.74,-1.03,0.06,2.54,1.03,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","CGTACAATCACACAAA",5,86.81,10.74,-0.02,0.06,2.92,1.05,0,">1 nonsynonymous","S45T T148D",2
"lib1","SARS-CoV-2","CGTACAATCATAGCCT",2,48.59,10.27,-0.49,0.08,2.81,1.04,0,">1 nonsynonymous","F44A P149L T201N",3
"lib1","SARS-CoV-2","CGTACACAAACCTCAT",9,73.51,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2R Y91D A105T F126G",4
"lib1","SARS-CoV-2","CGTACACAATAGCGTT",2,72.24,10.74,-0.02,0.07,2.85,1.07,0,">1 nonsynonymous","I2L K199I",2
"lib1","SARS-CoV-2","CGTACACCGATTCTGG",5,148.67,9.41,-1.36,0.07,2.82,1.13,0,">1 nonsynonymous","Y119H E141P",2
"lib1","SARS-CoV-2","CGTACACGGAGTTTGT",1,42.38,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y66V D90T Y119K T140I G146D",5
"lib1","SARS-CoV-2","CGTACACGTGTCTTAT",3,8.45,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N13C F47L G146I",3
"lib1","SARS-CoV-2","CGTACACTCAATCATT",2,59.59,8.28,-2.49,0.13,1.99,1.12,0.01,">1 nonsynonymous","C6N S43M T55E P177S",4
"lib1","SARS-CoV-2","CGTACAGACTAAGGCA",5,47.61,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V11A Y39L V71R K87T D98Y",5
"lib1","SARS-CoV-2","CGTACAGAGGCTGACC",5,162.5,9.82,-0.95,0.14,1.83,1.1,0.01,"1 nonsynonymous","R25K",1
"lib1","SARS-CoV-2","CGTACAGGCAGATTGC",3,76.05,10.75,-0.01,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTACAGTCCGGATGC",6,102.98,10.72,-0.04,0.07,2.93,1.06,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","CGTACAGTTAGTTCTA",8,20.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P C61G E141S G174R",4
"lib1","SARS-CoV-2","CGTACATATCAGGTCG",4,50.99,9.87,-0.9,0.11,2.61,1.07,0,">1 nonsynonymous","P7L G116I",2
"lib1","SARS-CoV-2","CGTACATCTATAGATG",3,22.59,8.76,-2,0.19,1.82,1.17,0.01,">1 nonsynonymous","A42P L95T Y159F",3
"lib1","SARS-CoV-2","CGTACATCTGATGACG",1,2.3,NA,NA,NA,NA,NA,NA,"stop","S45* N110*",2
"lib1","SARS-CoV-2","CGTACATTACAATTAG",6,49.48,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A89R L95R",2
"lib1","SARS-CoV-2","CGTACCACTCAAAGAA",2,7.74,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","V11C S41G G116Y L162A N171H",5
"lib1","SARS-CoV-2","CGTACCAGAACAGGTG",10,51.81,9.22,-1.54,0.17,1.59,1.2,0.01,">1 nonsynonymous","F8R N130T",2
"lib1","SARS-CoV-2","CGTACCAGGTTGGCTT",3,11.91,10.28,-0.49,0.1,2.89,1.1,0,">1 nonsynonymous","E10G D98S",2
"lib1","SARS-CoV-2","CGTACCAGTAAACTAT",1,54.42,10.82,0.05,0.05,2.91,1.03,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","CGTACCAGTTACTATA",4,12.64,8.51,-2.25,0.28,1.96,1.18,0.04,">1 nonsynonymous","G83K G146L",2
"lib1","SARS-CoV-2","CGTACCATAGTAAATC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","K26* S147W",2
"lib1","SARS-CoV-2","CGTACCCGTCCACCCT",4,37.75,8.32,-2.44,0.07,1.83,1.09,0,">1 nonsynonymous","F44N A105L T148I",3
"lib1","SARS-CoV-2","CGTACCCTCAAATAGT",2,21.75,9.26,-1.51,0.54,1.5,1,0.08,">1 nonsynonymous","P7G G86V A105D",3
"lib1","SARS-CoV-2","CGTACCGATCTCCGAG",4,52.83,9.8,-0.97,0.13,2.08,1.13,0.01,">1 nonsynonymous","K48V T55I I138F S147I",4
"lib1","SARS-CoV-2","CGTACCGGACACAGTC",1,7.69,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G51V E76V W106T T148M T201A",5
"lib1","SARS-CoV-2","CGTACCGTGAGTAAAC",4,47.46,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N58L G86S I142H G152V",4
"lib1","SARS-CoV-2","CGTACCTACGGCACTT",5,30.78,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T3F S45K V103C C150W",4
"lib1","SARS-CoV-2","CGTACCTCAGACAGAC",1,41.45,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P7M F17Y Q84L I138S G152C",5
"lib1","SARS-CoV-2","CGTACCTGCCCGGTGG",19,1.97,NA,NA,NA,NA,NA,NA,"stop","A14* A33R P96K N151H T170M G174L V182* T201R",8
"lib1","SARS-CoV-2","CGTACCTGTATCCTTA",3,49.81,6.11,-4.66,1.22,1.5,1.25,0.04,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","CGTACCTTGCAAAACG",3,13.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V37L A89W T140S",3
"lib1","SARS-CoV-2","CGTACGAAAGCACAAA",3,46.79,10.65,-0.11,0.04,2.91,1.03,0,">1 nonsynonymous","N58E L122Q S139M",3
"lib1","SARS-CoV-2","CGTACGAACATTAAAT",1,12.63,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","D59A N107V Y119R D137A T201D",5
"lib1","SARS-CoV-2","CGTACGAAGTCAACTT",3,35.89,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T46R W106P E141P",3
"lib1","SARS-CoV-2","CGTACGACAAGCACAT",4,40.75,8.4,-2.36,0.12,1.85,1.14,0,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","CGTACGCCCGTGAAGT",6,123.78,10.65,-0.11,0.06,2.89,1,0,">1 nonsynonymous","D90C L188E",2
"lib1","SARS-CoV-2","CGTACGGCCTGTATAT",4,2.68,NA,NA,NA,NA,NA,NA,"stop","S41R K114* F134E V181R",4
"lib1","SARS-CoV-2","CGTACGGTATAGTGAG",3,6.86,NA,NA,NA,NA,NA,NA,"stop","T15N F99N P197*",3
"lib1","SARS-CoV-2","CGTACGGTCTAACGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48P S113I P149L S200Q",4
"lib1","SARS-CoV-2","CGTACGGTGCCGCTGG",2,14.8,6.46,-4.3,0.4,1.5,1.11,0.02,">1 nonsynonymous","C61Q V77G A105I N118A",4
"lib1","SARS-CoV-2","CGTACGTAAGATAGAA",4,6.06,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","F17C A33N A105F",3
"lib1","SARS-CoV-2","CGTACTAAAGTTACAA",5,54.13,10.71,-0.05,0.1,2.88,1.07,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","CGTACTAACAGTAGGG",4,99.07,9.86,-0.91,0.07,2.62,1.05,0,">1 nonsynonymous","K114A L122R K128V Q144L",4
"lib1","SARS-CoV-2","CGTACTAAGCAAAGTC",1,18.2,6.8,-3.97,0.53,1.5,1.28,0.05,">1 nonsynonymous","V77Q N109T P149Q V173A",4
"lib1","SARS-CoV-2","CGTACTAAGGCCAATC",3,10.4,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V65S Y91V W106G Y119S A145P",5
"lib1","SARS-CoV-2","CGTACTAGGAGACAAT",6,4.22,NA,NA,NA,NA,NA,NA,"stop","P7A P54E I72V A89P A105K R127C Y178* C195S K199*",9
"lib1","SARS-CoV-2","CGTACTAGGCACAGAG",7,94.45,10.75,-0.01,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTACTATAAAGCGTA",1,48.09,10.67,-0.1,0.07,2.91,1.03,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CGTACTCAAATTTGCC",1,0.75,NA,NA,NA,NA,NA,NA,"stop","F8S F17Y V37I I104* S113R",5
"lib1","SARS-CoV-2","CGTACTCACACCTTGC",6,89.31,10.65,-0.12,0.04,2.92,1.04,0,">1 nonsynonymous","I2V C61I",2
"lib1","SARS-CoV-2","CGTACTCCTACGCAAC",2,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G D90L P96S N151M",4
"lib1","SARS-CoV-2","CGTACTCGAACACATG",1,76.67,10.69,-0.08,0.05,2.82,1.04,0,">1 nonsynonymous","K128V Q144N",2
"lib1","SARS-CoV-2","CGTACTGCGGGCCTGA",4,63.21,9.64,-1.13,0.13,1.92,1.06,0.01,">1 nonsynonymous","R25C P197S",2
"lib1","SARS-CoV-2","CGTACTGTAAGAGTAC",2,18.37,8.27,-2.5,0.39,1.5,1.01,0.07,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","CGTACTGTACCCAGAA",5,76.93,10.65,-0.11,0.05,2.92,1.04,0,">1 nonsynonymous","L122K S129P G174A",3
"lib1","SARS-CoV-2","CGTACTGTGCTCCTAG",5,1.16,NA,NA,NA,NA,NA,NA,"stop","T15* K56G",2
"lib1","SARS-CoV-2","CGTACTTCTACGTTAA",1,11.68,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L125R F160C Y178G",3
"lib1","SARS-CoV-2","CGTACTTGTAAGGGGA",4,46.19,8.24,-2.53,0.28,1.5,1.1,0.03,">1 nonsynonymous","A14D N40Y S43F F160L V173H",5
"lib1","SARS-CoV-2","CGTAGAACACAATCCA",1,28.39,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","W106M S147F F167V",3
"lib1","SARS-CoV-2","CGTAGAAGTGAAATAA",2,1.84,NA,NA,NA,NA,NA,NA,"stop","Y39N E154M Q168*",3
"lib1","SARS-CoV-2","CGTAGAATCCACACAA",5,15.26,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","T3Q D112Q P177Q",3
"lib1","SARS-CoV-2","CGTAGACAAATACGCA",1,25.83,10.46,-0.3,0.06,2.87,1.04,0,">1 nonsynonymous","N1K G9F E141Q",3
"lib1","SARS-CoV-2","CGTAGACCAAACACAT",2,67.67,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K26R C61N D112S S129I N151K G166R",6
"lib1","SARS-CoV-2","CGTAGACCAATCAAGG",7,29.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N N64Q N107L T201Q",4
"lib1","SARS-CoV-2","CGTAGACTCGCTTTCA",4,16.2,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D34R R78D N107S R127N G146D C158L",6
"lib1","SARS-CoV-2","CGTAGACTGCAGCCGC",4,36.48,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A18T Y50D D68N G86R A105F G155F",6
"lib1","SARS-CoV-2","CGTAGAGTGGATTGAT",1,70.05,11.06,0.29,0.07,2.89,1.04,0,"1 nonsynonymous","N171F",1
"lib1","SARS-CoV-2","CGTAGATACGAAGTAC",2,74.1,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L131R E154S",2
"lib1","SARS-CoV-2","CGTAGATATGGCTCCT",2,42.78,10.89,0.13,0.08,2.94,1.04,0,"1 nonsynonymous","V37W",1
"lib1","SARS-CoV-2","CGTAGATGTGGTGTCT",3,25.41,10.55,-0.21,0.07,2.96,1.01,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","CGTAGCACTTAATATC",1,31.73,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","I2W T55I L122E F167T",4
"lib1","SARS-CoV-2","CGTAGCAGAGTTTAGT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93A V103I P133L C150S V181R A190Y",6
"lib1","SARS-CoV-2","CGTAGCATTACGTTTA",4,29.73,6,-4.76,0.76,1.5,1.14,0.01,">1 nonsynonymous","V65L P82T D98I",3
"lib1","SARS-CoV-2","CGTAGCCAACACCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3R T15K A33L S41* C158M",5
"lib1","SARS-CoV-2","CGTAGCCAGAACTCGA",5,79.79,9.87,-0.9,0.1,2.36,1.05,0,">1 nonsynonymous","T3N V77L D98C V115Y S139T",5
"lib1","SARS-CoV-2","CGTAGCCCTAGAAGTG",1,24.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L K56H G101M",3
"lib1","SARS-CoV-2","CGTAGCCCTGGTGACA",9,54.3,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N1C D68W D97L",3
"lib1","SARS-CoV-2","CGTAGCCTCCTTTACC",1,19.26,10.72,-0.04,0.08,2.87,1.03,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","CGTAGCCTGTAGCGCG",3,61.71,6.33,-4.44,1.02,1.5,1.16,0.06,">1 nonsynonymous","K56V C158L",2
"lib1","SARS-CoV-2","CGTAGCTAAGCATCGA",1,52.51,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K26W T55L T100R F167V",4
"lib1","SARS-CoV-2","CGTAGCTGCACTTACT",1,12.35,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W23Q A105G K128P N151K Y165Q",5
"lib1","SARS-CoV-2","CGTAGGATTTTAGGTA",18,236.06,10.76,-0.01,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTAGGCAATCAATAA",2,0.83,NA,NA,NA,NA,NA,NA,"stop","L38F I72E P169W K198*",4
"lib1","SARS-CoV-2","CGTAGGCGGAAAAAAG",4,277.57,7.37,-3.39,0.19,1.5,1.14,0.01,">1 nonsynonymous","A33P D98A N120P K128N Y175H",5
"lib1","SARS-CoV-2","CGTAGGCGGGAAGAAA",8,62.12,10.81,0.04,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTAGGGGGTATGTGA",2,101.12,10.79,0.02,0.07,2.87,1.08,0,">1 nonsynonymous","S129A T201L",2
"lib1","SARS-CoV-2","CGTAGGTCCTATGCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","R16V I28V D112* P177E",4
"lib1","SARS-CoV-2","CGTAGGTTTCACTGTA",1,14.58,10.44,-0.33,0.08,2.95,1.01,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","CGTAGTAAAAAAATAG",1,10.05,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","E10R S113E S139P",3
"lib1","SARS-CoV-2","CGTAGTAAATATGATC",1,8.71,9.75,-1.01,0.18,2.11,1.01,0.02,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","CGTAGTAACCAACAAT",1,183.41,10.65,-0.12,0.07,2.92,1.07,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","CGTAGTAATAGCTGTT",1,10.57,10.72,-0.04,0.06,3,1,0,">1 nonsynonymous","P149T T201N",2
"lib1","SARS-CoV-2","CGTAGTAATGCCCTAA",2,7.39,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R78Q T140I Q163F",3
"lib1","SARS-CoV-2","CGTAGTAATTGGCTAT",5,9.93,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15M V37C C49H C61W K87E I138N S184Y",7
"lib1","SARS-CoV-2","CGTAGTACATGATCTT",3,59.1,6.38,-4.39,0.36,1.54,1.11,0.01,">1 nonsynonymous","K56V C158M",2
"lib1","SARS-CoV-2","CGTAGTACTAGACTAC",13,53.79,6,-4.76,2,3,1.12,0,">1 nonsynonymous","E10A G83V Y91T C158A",4
"lib1","SARS-CoV-2","CGTAGTCCAGTGATAC",8,70.3,7.91,-2.85,0.3,1.5,1.14,0.03,">1 nonsynonymous","I2L G51W T170M S184N T201K",5
"lib1","SARS-CoV-2","CGTAGTCGAAGCCTTT",4,277.57,9.03,-1.74,0.11,1.81,1.11,0,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","CGTAGTCGTTACTATT",6,72.65,6,-4.76,2,3,1.22,0,">1 nonsynonymous","F126C P149V F167C",3
"lib1","SARS-CoV-2","CGTAGTCTCGTAGACA",2,37.91,6,-4.76,0.77,1.5,1.14,0.01,">1 nonsynonymous","F12W C31E G86V F126M P161H V173F",6
"lib1","SARS-CoV-2","CGTAGTCTTCCTAGGT",6,393.91,8.16,-2.6,0.16,1.96,1.12,0.01,">1 nonsynonymous","Y39E F47L Q176E",3
"lib1","SARS-CoV-2","CGTAGTGCTTTGTCAA",10,71.57,8.9,-1.87,0.2,1.63,1.17,0.02,">1 nonsynonymous","T63Y Y121H E135V Y143F",4
"lib1","SARS-CoV-2","CGTAGTTAAGATAAGA",3,93.89,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D34L Y175E",2
"lib1","SARS-CoV-2","CGTAGTTAAGTTAGGC",3,32.3,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A89M R124T S200W",3
"lib1","SARS-CoV-2","CGTAGTTGCTGCTTAG",4,91.11,10.78,0.01,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTATAAAAGGTGTGA",7,17.6,NA,NA,NA,NA,NA,NA,"stop","D90* V181L",2
"lib1","SARS-CoV-2","CGTATAAACAATGTTG",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E W23R A145S",3
"lib1","SARS-CoV-2","CGTATAAAGATTTATG",17,115.34,8.55,-2.22,0.14,1.52,1.18,0.01,">1 nonsynonymous","Y91T T140M V173F",3
"lib1","SARS-CoV-2","CGTATAAAGTCAAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T T55W P96C T201G",4
"lib1","SARS-CoV-2","CGTATAAATAACACCA",2,71,9.83,-0.94,0.1,2.4,1.02,0.01,">1 nonsynonymous","N13F E154C",2
"lib1","SARS-CoV-2","CGTATAAATAGTCAGG",1,6.72,8.45,-2.32,0.4,2.35,1.22,0.05,"1 nonsynonymous","G166E",1
"lib1","SARS-CoV-2","CGTATAACAACCCATG",7,211.15,7.07,-3.69,0.2,1.5,1.12,0.01,">1 nonsynonymous","K56G C150D",2
"lib1","SARS-CoV-2","CGTATAACTTAAAACA",2,55.22,6.66,-4.1,0.39,1.5,1.16,0.02,">1 nonsynonymous","Y39K N107Y",2
"lib1","SARS-CoV-2","CGTATAATAGAGCGGT",4,91.7,7.66,-3.1,0.28,1.5,1.18,0.02,">1 nonsynonymous","V103D G116V G117F",3
"lib1","SARS-CoV-2","CGTATAATAGTAACTG",3,53.29,10.77,0,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTATACAAAAGTGGA",1,48.49,10.68,-0.08,0.04,2.99,1,0,">1 nonsynonymous","Q163V T170L",2
"lib1","SARS-CoV-2","CGTATACACGTGGTCA",8,131.93,10.62,-0.14,0.05,2.89,1.02,0,"1 nonsynonymous","S184R",1
"lib1","SARS-CoV-2","CGTATACCAAGCGACC",6,48.58,8.93,-1.83,0.19,1.5,1.1,0.02,"1 nonsynonymous","W23D",1
"lib1","SARS-CoV-2","CGTATACCACTGAAAC",4,83.2,6,-4.76,1,1.5,1.11,0.01,">1 nonsynonymous","N92L D98N G166S",3
"lib1","SARS-CoV-2","CGTATACCGAGGTTCT",4,64.62,9.93,-0.83,0.12,2.15,1.05,0.01,"1 nonsynonymous","S19R",1
"lib1","SARS-CoV-2","CGTATACCGATAACTA",1,13.59,10.74,-0.02,0.07,3,1,0,">1 nonsynonymous","L5I N40D",2
"lib1","SARS-CoV-2","CGTATACGAAGCCTAC",3,35.8,8.22,-2.55,0.15,1.5,1.16,0.01,">1 nonsynonymous","C6K L38N S184G",3
"lib1","SARS-CoV-2","CGTATACTAGAGGTTA",3,2.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","CGTATATAAACCAGAG",4,0.13,NA,NA,NA,NA,NA,NA,"stop","D59* G155C L162S N171H S184V",5
"lib1","SARS-CoV-2","CGTATATAAACCCTGG",7,92.84,10,-0.76,0.08,2.27,1.03,0,">1 nonsynonymous","P7E A105N",2
"lib1","SARS-CoV-2","CGTATATACCTTTGTG",3,26.43,10.87,0.1,0.08,2.88,1.05,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","CGTATATCCAAACCTA",4,1.07,NA,NA,NA,NA,NA,NA,"stop","R27L L122*",2
"lib1","SARS-CoV-2","CGTATATCTACACTGG",4,77.82,6.13,-4.63,0.6,1.5,1.14,0.01,">1 nonsynonymous","S29I S41K G146I",3
"lib1","SARS-CoV-2","CGTATATTAATCTATT",8,236.13,10.5,-0.26,0.03,2.83,1.05,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","CGTATATTATCCCCTA",8,72.46,9.35,-1.41,0.13,1.52,1.14,0.01,">1 nonsynonymous","T3P W23C",2
"lib1","SARS-CoV-2","CGTATATTGAGAATAC",3,0.6,NA,NA,NA,NA,NA,NA,"stop","A18T N24Q N92S P149T Q163T Q176* E186S",7
"lib1","SARS-CoV-2","CGTATATTGGATACCT",1,42.83,8.91,-1.86,0.08,2.96,1.05,0,">1 nonsynonymous","Y35L I72T T100Y Y119N",4
"lib1","SARS-CoV-2","CGTATCAATACACACG",4,27.76,10.27,-0.49,0.09,2.81,1.01,0,">1 nonsynonymous","P133T T201H",2
"lib1","SARS-CoV-2","CGTATCACAAATTAAG",7,59.89,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D112T N118I F156R",3
"lib1","SARS-CoV-2","CGTATCACATTACTCA",1,0.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183K",1
"lib1","SARS-CoV-2","CGTATCACCGATTTAT",4,987.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I88G K114Q",2
"lib1","SARS-CoV-2","CGTATCAGCTTTCTAA",7,118.48,10.69,-0.07,0.03,2.94,1.01,0,">1 nonsynonymous","T46Y L122W",2
"lib1","SARS-CoV-2","CGTATCATAACCGCGA",7,130.29,6.71,-4.05,0.3,1.5,1.17,0.01,">1 nonsynonymous","Y39S N157I",2
"lib1","SARS-CoV-2","CGTATCATACTCGTAC",2,58.2,10.62,-0.15,0.05,2.85,1.05,0,">1 nonsynonymous","S36R Q144M",2
"lib1","SARS-CoV-2","CGTATCATGCCTTAAA",12,185.67,10.19,-0.57,0.07,2.39,1.01,0,">1 nonsynonymous","G51S V65L T100S K199G",4
"lib1","SARS-CoV-2","CGTATCATTGCGATAT",2,40.05,10.7,-0.06,0.04,2.92,1.01,0,">1 nonsynonymous","G9Q F160P",2
"lib1","SARS-CoV-2","CGTATCCAAAAGGCAA",12,312.17,9.14,-1.62,0.08,2.37,1.1,0,">1 nonsynonymous","G9S Q176R",2
"lib1","SARS-CoV-2","CGTATCCACATTGACT",1,9.54,9.44,-1.32,0.45,2.12,1,0.05,">1 nonsynonymous","K48E N107S K128I",3
"lib1","SARS-CoV-2","CGTATCCCATGGCGAA",5,93.97,8.55,-2.21,0.16,1.63,1.13,0.01,">1 nonsynonymous","I2L Y91S E141C",3
"lib1","SARS-CoV-2","CGTATCCCATTTCACT",4,24.47,10.38,-0.39,0.12,2.86,1.05,0.01,">1 nonsynonymous","I2S E10R D59T E76Q",4
"lib1","SARS-CoV-2","CGTATCCCGAACGCAA",1,40.39,10.76,0,0.11,2.78,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTATCCTAATCAAAT",4,94.26,10.73,-0.04,0.05,2.95,1.01,0,">1 nonsynonymous","T46L K128Y",2
"lib1","SARS-CoV-2","CGTATCCTAGTGCGCA",7,181.61,10.58,-0.19,0.05,2.92,1.02,0,">1 nonsynonymous","S41K D97L",2
"lib1","SARS-CoV-2","CGTATCGCAAACATCT",4,62.91,10.53,-0.23,0.14,2.64,1.07,0.01,">1 nonsynonymous","G155T V181H A190K",3
"lib1","SARS-CoV-2","CGTATCTACACACAGT",4,105.38,10.64,-0.13,0.04,2.82,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTATCTCAATGCCAC",3,64.55,9.32,-1.44,0.08,2.76,1.13,0,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","CGTATCTCAGGGACAC",11,102.93,10.16,-0.6,0.06,2.83,1.03,0,">1 nonsynonymous","N40F T170S",2
"lib1","SARS-CoV-2","CGTATCTGGTTAGAAA",5,131.41,10.03,-0.73,0.06,2.82,1,0,"1 nonsynonymous","C6I",1
"lib1","SARS-CoV-2","CGTATCTTCGAGTGCT",1,13.44,6.79,-3.97,0.47,1.5,1.07,0.05,">1 nonsynonymous","S19F P133S V153S",3
"lib1","SARS-CoV-2","CGTATCTTGCTACTTG",1,9.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56S I104E N109R G174E",4
"lib1","SARS-CoV-2","CGTATCTTTCTGACGA",1,11.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198A",1
"lib1","SARS-CoV-2","CGTATGAAACCTGGAT",5,71.48,10.57,-0.19,0.07,2.87,1.08,0,"1 nonsynonymous","T3W",1
"lib1","SARS-CoV-2","CGTATGAAACTCGACC",4,39.94,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A81F R124A S147F G174K",4
"lib1","SARS-CoV-2","CGTATGAAAGGTGCTA",15,48.09,9.01,-1.76,0.38,1.5,1,0.07,">1 nonsynonymous","G9V V103M",2
"lib1","SARS-CoV-2","CGTATGACAACAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9V V37R Y91N A105* T201C",5
"lib1","SARS-CoV-2","CGTATGCGAAAATGGC",7,45.01,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12T N64L K87M R127K F134Q",5
"lib1","SARS-CoV-2","CGTATGTAAGCAATTA",3,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I N13S A18E C61N C102G T140C",6
"lib1","SARS-CoV-2","CGTATGTAAGCCTACT",2,50.56,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28S L38Y G86D",3
"lib1","SARS-CoV-2","CGTATGTCTGACCGTA",9,210.17,7.81,-2.95,0.23,1.5,1.07,0.02,">1 nonsynonymous","Y91F N107T Q176W K199N",4
"lib1","SARS-CoV-2","CGTATGTGATCTCTCT",3,15.8,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G86K F126L G172E",3
"lib1","SARS-CoV-2","CGTATGTTATGAACCT",2,73.42,8.12,-2.65,0.24,1.51,1.2,0.02,">1 nonsynonymous","V37L D112S A192S",3
"lib1","SARS-CoV-2","CGTATGTTGACCTGGC",4,17.07,8.56,-2.21,0.25,1.55,1.22,0.04,">1 nonsynonymous","F44R S139Y",2
"lib1","SARS-CoV-2","CGTATTAAAAAACTGT",1,23.77,10.18,-0.58,0.08,2.78,1,0,">1 nonsynonymous","S36Q G155I",2
"lib1","SARS-CoV-2","CGTATTAAAACCTGTC",3,78.23,10.28,-0.48,0.06,2.86,1.02,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","CGTATTAAACGCAGGC",1,33.63,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y39S V103L F134S",3
"lib1","SARS-CoV-2","CGTATTAAAGGTTATG",1,29.68,10.55,-0.21,0.07,2.86,1.07,0,"1 nonsynonymous","A33M",1
"lib1","SARS-CoV-2","CGTATTACGAAAGAAG",6,60.66,6.86,-3.91,0.4,1.5,1.22,0.03,">1 nonsynonymous","S19T D68K",2
"lib1","SARS-CoV-2","CGTATTCCACGACCCT",4,22.46,6,-4.76,0.79,3,1.1,0.01,">1 nonsynonymous","R25V Y91S",2
"lib1","SARS-CoV-2","CGTATTCCTAATGGTA",2,64.78,10.71,-0.05,0.07,2.91,1.07,0,"1 nonsynonymous","P197Y",1
"lib1","SARS-CoV-2","CGTATTCGTCTGCGAT",14,259.27,9.38,-1.38,0.05,2.71,1.09,0,">1 nonsynonymous","S113T K128V",2
"lib1","SARS-CoV-2","CGTATTCTATGCGTCC",7,44.46,7.65,-3.12,0.25,1.5,1,0.02,">1 nonsynonymous","D34T P54S Y165P",3
"lib1","SARS-CoV-2","CGTATTCTTAATTACT",2,56.93,10.79,0.02,0.05,2.94,1.02,0,">1 nonsynonymous","E10Q L60M",2
"lib1","SARS-CoV-2","CGTATTGATACACGGT",13,238.75,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","C158P",1
"lib1","SARS-CoV-2","CGTATTGATACAGTGG",1,24.01,10.39,-0.38,0.12,2.82,1.16,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CGTATTGTCTTTACTA",3,118.23,10.71,-0.05,0.07,2.95,1.02,0,"1 nonsynonymous","C61Q",1
"lib1","SARS-CoV-2","CGTATTTATTAAAAAG",5,15.5,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","C6V S19Q S43W E154Y",4
"lib1","SARS-CoV-2","CGTATTTCACCAAGGC",4,67.96,10.18,-0.58,0.03,2.89,1.03,0,">1 nonsynonymous","N4Q Q176M",2
"lib1","SARS-CoV-2","CGTATTTCCTGATCAC",2,44.44,6,-4.76,2,3,1.17,0,">1 nonsynonymous","W106S C158I",2
"lib1","SARS-CoV-2","CGTATTTCGTTTGACT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","F8V W23* D34N K87T R127S S200M",6
"lib1","SARS-CoV-2","CGTATTTGCCTACTAC",8,16.81,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","N13I R124P",2
"lib1","SARS-CoV-2","CGTATTTGGAAAGTTT",2,0.97,NA,NA,NA,NA,NA,NA,"stop","K48S D112* P149W G155C",4
"lib1","SARS-CoV-2","CGTATTTTAATTCTAA",3,4.6,NA,NA,NA,NA,NA,NA,"stop","I88E G146V Y159S P169H R179*",5
"lib1","SARS-CoV-2","CGTATTTTACGAATAG",5,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S T63M Y91M",3
"lib1","SARS-CoV-2","CGTATTTTGATATGAG",1,52.49,10.76,0,0.1,2.87,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CGTATTTTTATCCCTT",6,105.63,10.43,-0.33,0.06,2.86,1.01,0,">1 nonsynonymous","F12I T100H",2
"lib1","SARS-CoV-2","CGTCAAAAAACTGAAT",1,47.95,10.82,0.06,0.08,2.92,1.04,0,">1 nonsynonymous","L5S Q84K",2
"lib1","SARS-CoV-2","CGTCAAAACTACCTGT",2,34.61,10.74,-0.03,0.06,2.87,1.08,0,">1 nonsynonymous","S53D P197R",2
"lib1","SARS-CoV-2","CGTCAAAAGATATTAT",5,123.63,10.53,-0.24,0.04,2.9,1.07,0,">1 nonsynonymous","S36T L60T V173I",3
"lib1","SARS-CoV-2","CGTCAAAAGCAAAAGG",1,12.87,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F8S D112Y P133S",3
"lib1","SARS-CoV-2","CGTCAAAATTATACTG",2,42.71,6.03,-4.74,0.4,3,1.15,0,">1 nonsynonymous","T85G F160V Y175L",3
"lib1","SARS-CoV-2","CGTCAAAATTCTATCA",6,51.48,10.02,-0.74,0.11,2.34,1.1,0,">1 nonsynonymous","C6I A33I D90N G152K",4
"lib1","SARS-CoV-2","CGTCAAACAGTTTTAT",6,12.08,9.52,-1.24,0.35,1.5,1,0.05,">1 nonsynonymous","P96W S184C",2
"lib1","SARS-CoV-2","CGTCAAAGATAAGTAA",9,95.25,9.84,-0.93,0.07,2.19,1.09,0,">1 nonsynonymous","S36F P133E",2
"lib1","SARS-CoV-2","CGTCAAAGATGAATAA",4,25.81,6,-4.76,1.7,1.5,1.25,0.06,">1 nonsynonymous","N4R V103F Y123R",3
"lib1","SARS-CoV-2","CGTCAAATCATACCTT",11,151.06,9.2,-1.57,0.13,1.66,1.18,0.01,">1 nonsynonymous","T55L A105S P133N T148F",4
"lib1","SARS-CoV-2","CGTCAAATCTGAAAAA",1,30.17,10.86,0.09,0.09,2.95,1.04,0,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","CGTCAAATTACACAAG",6,29.32,9.78,-0.98,0.14,1.84,1.09,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CGTCAACAAATATATT",9,73.31,8.2,-2.56,0.26,1.5,1.12,0.02,">1 nonsynonymous","L38S Y66L P149L",3
"lib1","SARS-CoV-2","CGTCAACAATCTTCCC",15,49.07,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9L A14W N40F N110R F167G A190F",6
"lib1","SARS-CoV-2","CGTCAACACACTAATA",11,142.94,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S19W F44T I72T K199P",4
"lib1","SARS-CoV-2","CGTCAACAGAAAGTAT",8,172.64,10.63,-0.13,0.03,2.91,1.04,0,"1 nonsynonymous","G152T",1
"lib1","SARS-CoV-2","CGTCAACATAACTTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CGTCAACATACCAATA",5,56.57,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","D59L A67T G86V G101I S139Y P149H",6
"lib1","SARS-CoV-2","CGTCAACCGGGGCTAG",3,1.77,NA,NA,NA,NA,NA,NA,"stop","T3K Y39* K56P G86L G152P",5
"lib1","SARS-CoV-2","CGTCAACGCTTGTTCT",1,59.72,10.54,-0.23,0.06,2.89,1.06,0,">1 nonsynonymous","A22D K128M",2
"lib1","SARS-CoV-2","CGTCAACTGGACGAAA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","T3Y G9I S19K F44G D98* T148*",6
"lib1","SARS-CoV-2","CGTCAAGTCACTACAA",8,61.82,9.22,-1.54,0.15,1.9,1.1,0.01,">1 nonsynonymous","V11W A18F N151S G174R",4
"lib1","SARS-CoV-2","CGTCAATAAATCTTAG",5,73.82,10.8,0.04,0.09,2.88,1.08,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","CGTCAATTAACACAAG",8,3.07,NA,NA,NA,NA,NA,NA,"stop","T63* Y121N",2
"lib1","SARS-CoV-2","CGTCAATTGTATAATT",7,98.95,10.63,-0.13,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTCACAACCCTTTTA",5,10.86,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P96M V182R",2
"lib1","SARS-CoV-2","CGTCACACGCAGTTGA",1,40.64,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G101V P149I",2
"lib1","SARS-CoV-2","CGTCACAGATTAGCGT",4,24.35,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","Y93S G101N E141L A190S",4
"lib1","SARS-CoV-2","CGTCACAGTCTTGCAT",9,42.53,6.31,-4.45,0.41,1.5,1.14,0.01,">1 nonsynonymous","G155F T170V",2
"lib1","SARS-CoV-2","CGTCACATACTTTAAT",13,197.04,8.34,-2.43,0.14,1.91,1.08,0.01,">1 nonsynonymous","C49V Y119Q T201N",3
"lib1","SARS-CoV-2","CGTCACCAATTGGATT",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C R16L G155S",3
"lib1","SARS-CoV-2","CGTCACCATTCAACCC",4,94.22,8.67,-2.09,0.1,2.37,1.09,0,">1 nonsynonymous","N58T A145P",2
"lib1","SARS-CoV-2","CGTCACGGATATAGGC",3,30.26,6,-4.76,2,2.87,1.13,0,">1 nonsynonymous","D59F K87R Y93C V115F S200L",5
"lib1","SARS-CoV-2","CGTCACTATGCCCCAT",2,31.16,10.74,-0.03,0.05,2.9,1.03,0,">1 nonsynonymous","V65C S164A",2
"lib1","SARS-CoV-2","CGTCACTCTCCAGAAA",4,48.19,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P161L Q168E",2
"lib1","SARS-CoV-2","CGTCACTTATGTAGTG",3,41.57,8.86,-1.91,0.09,2.86,1.09,0,">1 nonsynonymous","S113T G166S",2
"lib1","SARS-CoV-2","CGTCAGAAACCCTTAG",2,11.4,10.58,-0.19,0.1,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTCAGAACAAACAAT",1,45.24,6.06,-4.7,1,1.5,1.22,0.02,">1 nonsynonymous","E10R R16I W106T K128M V182I",5
"lib1","SARS-CoV-2","CGTCAGCTGCACTGGA",2,37.24,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6G R16C D98G N110I F126S",5
"lib1","SARS-CoV-2","CGTCAGGCACCCTGAC",3,47.84,8.49,-2.28,0.09,1.99,1.11,0,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","CGTCAGGCATAGAAAA",4,54.61,10.74,-0.03,0.05,2.93,1.02,0,">1 nonsynonymous","A42K T85K",2
"lib1","SARS-CoV-2","CGTCAGTATTCACGCG",4,28,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","CGTCATAGCTGAATAA",3,81.99,10.35,-0.41,0.05,2.97,1.02,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","CGTCATAGTTCAACGC",4,69.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10I V37M I138S Y165G",4
"lib1","SARS-CoV-2","CGTCATCATTTCACGG",4,98.13,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","V77H A89L E141F Q176A",4
"lib1","SARS-CoV-2","CGTCATCCATCTGATT",5,65.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36L P161Y",2
"lib1","SARS-CoV-2","CGTCATCTGAAATTGA",2,69.16,10.69,-0.07,0.04,2.95,1,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","CGTCATCTGCTGAGCA",5,44.81,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L5H R136I G172K",3
"lib1","SARS-CoV-2","CGTCATTCCCAGTGTG",3,5.66,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","T15I N24R V77M G116S G146L V180E",6
"lib1","SARS-CoV-2","CGTCCAAAACCATCCT",13,102.91,8.71,-2.06,0.12,2.13,1.13,0.01,">1 nonsynonymous","Y50V F156K",2
"lib1","SARS-CoV-2","CGTCCAAACTACTGAA",8,79.87,6,-4.76,1.83,1.5,1.17,0.01,">1 nonsynonymous","K48T N92V P149F",3
"lib1","SARS-CoV-2","CGTCCAAGATTTCCAC",2,0.92,NA,NA,NA,NA,NA,NA,"stop","V20E N118C P149* K199*",4
"lib1","SARS-CoV-2","CGTCCAAGTCCTTACC",1,5.42,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V11S T15W F99S T140K P149L Q176R H189R",7
"lib1","SARS-CoV-2","CGTCCAATAAGACTGT",5,137.32,10.75,-0.01,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTCCACACAGGTTCA",2,2.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48E",1
"lib1","SARS-CoV-2","CGTCCACACCAATCTA",8,67.95,6.26,-4.5,0.67,1.5,1.19,0.03,">1 nonsynonymous","R124P S147Y N151I",3
"lib1","SARS-CoV-2","CGTCCACCCAAGCAAC",2,62.5,8.81,-1.95,0.19,1.5,1,0.01,">1 nonsynonymous","Q84E F99C L122R",3
"lib1","SARS-CoV-2","CGTCCACCGGTTACTA",2,28.29,10.13,-0.64,0.09,2.81,1.01,0,">1 nonsynonymous","G116M F134L",2
"lib1","SARS-CoV-2","CGTCCAGAAAGCCTTT",4,120.84,8.49,-2.28,0.12,1.85,1.14,0.01,">1 nonsynonymous","A14Y Q84K T148A G155D",4
"lib1","SARS-CoV-2","CGTCCAGCTGTAGGAC",3,56.2,10.66,-0.11,0.05,2.95,1.05,0,"1 nonsynonymous","S139K",1
"lib1","SARS-CoV-2","CGTCCATAAAAAATTG",2,22.45,10.72,-0.04,0.05,2.96,1.01,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","CGTCCATGATGAAATC",2,1.63,NA,NA,NA,NA,NA,NA,"stop","E10D Y39R S45K S53* Y119F V173F",6
"lib1","SARS-CoV-2","CGTCCCACAGTTAAAT",5,28.94,9.86,-0.9,0.14,1.94,1.11,0.01,">1 nonsynonymous","V65L D98M S129P Q163Y",4
"lib1","SARS-CoV-2","CGTCCCACTAGGCGCA",2,16.07,10.7,-0.06,0.09,2.81,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTCCCATAAGCTGCG",4,76.32,10.75,-0.02,0.06,2.92,1.06,0,">1 nonsynonymous","V37M A42H N120S",3
"lib1","SARS-CoV-2","CGTCCCCAACAAGCAA",10,62.53,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P7H V77P G174R",3
"lib1","SARS-CoV-2","CGTCCCCAGTGCCTAA",2,66.31,10.79,0.02,0.07,2.93,1.04,0,"1 nonsynonymous","A192T",1
"lib1","SARS-CoV-2","CGTCCCCATGACCAGC",1,36.83,10.74,-0.02,0.08,2.94,1.04,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","CGTCCCCCGATTCCGA",14,208.73,8.57,-2.2,0.14,1.76,1.13,0.01,">1 nonsynonymous","P7I S36R N64G K114N Q163N L188D",6
"lib1","SARS-CoV-2","CGTCCCCGACAATAGT",4,23.02,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","A14V L38N S45A I88T S113C L131R T201L",7
"lib1","SARS-CoV-2","CGTCCCTATTTTCGCA",1,16.63,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","G9L T55Y P177N H189I",4
"lib1","SARS-CoV-2","CGTCCCTGTCCCCCAG",2,16.37,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I2A R16E G86C G101V D112L G196M",6
"lib1","SARS-CoV-2","CGTCCGAATACTTCAG",4,35.84,6,-4.76,1.85,1.9,1.32,0.03,"1 nonsynonymous","I80W",1
"lib1","SARS-CoV-2","CGTCCGAATTTTTACT",5,41.98,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F99T F167E",2
"lib1","SARS-CoV-2","CGTCCGATGGTATGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","S36* N130T E141I",3
"lib1","SARS-CoV-2","CGTCCGCAAATACTTC",3,41.03,6.28,-4.48,0.84,1.5,1.15,0.03,">1 nonsynonymous","F8L Y50S T63F P133D",4
"lib1","SARS-CoV-2","CGTCCGGATAAATCAG",3,9.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V11H A42H L57D V77W L125Y I138Q F160I F167V S184E",9
"lib1","SARS-CoV-2","CGTCCTCCAGCTGGAT",4,88.04,10.32,-0.45,0.04,2.89,1,0,">1 nonsynonymous","A22S F62H K114L",3
"lib1","SARS-CoV-2","CGTCCTCTAAAACATA",6,1.85,NA,NA,NA,NA,NA,NA,"stop","T55P D90* P96F",3
"lib1","SARS-CoV-2","CGTCCTCTTACACACG",11,32.92,6.5,-4.26,0.54,1.5,1.15,0.03,">1 nonsynonymous","D98L V103R E154C",3
"lib1","SARS-CoV-2","CGTCCTGCACCAGACT",10,25.13,9.73,-1.03,0.19,2.25,1.09,0.01,">1 nonsynonymous","P96G Y121M",2
"lib1","SARS-CoV-2","CGTCGAAAAATTTCCT",1,0.5,NA,NA,NA,NA,NA,NA,"stop","L95* Y121G P149F",3
"lib1","SARS-CoV-2","CGTCGAACTCGCTCGC",2,8.78,10.45,-0.31,0.4,1.94,1,0.05,">1 nonsynonymous","A89T Q144D",2
"lib1","SARS-CoV-2","CGTCGACCAGATGTGA",6,71.32,6,-4.76,1.26,1.5,1.19,0.02,">1 nonsynonymous","F8Q G86H T100Y I104S Y119H Q176I",6
"lib1","SARS-CoV-2","CGTCGAGCATTTACAA",1,0.85,NA,NA,NA,NA,NA,NA,"stop","V65E S129* E135R P149R T201I",5
"lib1","SARS-CoV-2","CGTCGATATGATCCAT",1,35.48,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N92R T170F",2
"lib1","SARS-CoV-2","CGTCGCAACCCACGTT",2,14.13,6.67,-4.1,0.84,1.5,1.1,0.01,">1 nonsynonymous","Y35N N109S E154N Q168L",4
"lib1","SARS-CoV-2","CGTCGCTCTCTGTCTA",10,213.56,10.17,-0.6,0.03,2.89,1.03,0,">1 nonsynonymous","G83N Y91H",2
"lib1","SARS-CoV-2","CGTCGCTGAAGCCCGA",8,42.45,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N64Y A89L D97Y G117W G174R",5
"lib1","SARS-CoV-2","CGTCGCTGATCTATGG",18,139.48,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7Y G83N G101P L187H",4
"lib1","SARS-CoV-2","CGTCGTAACAATCTTA",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95E N118Q D137S T201L",4
"lib1","SARS-CoV-2","CGTCGTATGAGACGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K48C F167* A190I",3
"lib1","SARS-CoV-2","CGTCGTCCGTATATAG",3,144.9,9.84,-0.92,0.08,2.78,1.05,0,">1 nonsynonymous","C6G Y50F",2
"lib1","SARS-CoV-2","CGTCTAAAGGTGATGC",7,2.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","CGTCTAACGCGGGAGA",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G S41G",2
"lib1","SARS-CoV-2","CGTCTAAGTAATGGCT",3,41.68,10.14,-0.63,0.11,2.41,1.02,0.01,"1 nonsynonymous","I28S",1
"lib1","SARS-CoV-2","CGTCTAATAGAGTCAA",2,3.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CGTCTAATGAAATACT",2,8.47,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A22L G101V P161V",3
"lib1","SARS-CoV-2","CGTCTACCCTCCCATC",1,18.36,6,-4.76,1.46,3,1.13,0,">1 nonsynonymous","T46M Y93S G146A Y159F",4
"lib1","SARS-CoV-2","CGTCTACGTGCCGAAG",10,13.89,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1G A33N K87E Y123L P149L",5
"lib1","SARS-CoV-2","CGTCTACTGTGTACAC",10,10.86,6.67,-4.1,0.39,2.85,1.23,0.02,">1 nonsynonymous","A42F P82D",2
"lib1","SARS-CoV-2","CGTCTATTATTCAGCA",11,44.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L K114G",2
"lib1","SARS-CoV-2","CGTCTATTCTACGGGA",4,64.67,7.19,-3.58,0.16,1.69,1.16,0.01,">1 nonsynonymous","K56T K87N Y175S",3
"lib1","SARS-CoV-2","CGTCTATTTACCCGGA",4,35.91,10.17,-0.59,0.11,2.64,1,0.01,">1 nonsynonymous","L60R R136M",2
"lib1","SARS-CoV-2","CGTCTCAAAACTGTTA",1,50.36,9.49,-1.28,0.13,2.63,1.02,0.01,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","CGTCTCAGATTTCAAC",3,41.18,10.78,0.02,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTCTCCGAAACGTAT",6,39.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44I F167S",2
"lib1","SARS-CoV-2","CGTCTCCGTATAACGA",1,8.28,9.77,-0.99,0.29,1.72,1.03,0.04,">1 nonsynonymous","G9E I28E L187R",3
"lib1","SARS-CoV-2","CGTCTCCTTAGTTCTT",8,153.73,9.62,-1.15,0.13,1.92,1.09,0.01,">1 nonsynonymous","A89C Y178S",2
"lib1","SARS-CoV-2","CGTCTCTAATGCTCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","K26* Y178C",2
"lib1","SARS-CoV-2","CGTCTCTGATCTAATT",1,23.55,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S19L S45P Y50H G146A",4
"lib1","SARS-CoV-2","CGTCTGAAGCCTCAAA",1,52.26,10.26,-0.5,0.06,2.89,1.06,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","CGTCTGAAGGTTGGGC",2,7.08,10.21,-0.55,0.15,2.39,1.01,0.01,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","CGTCTGAAGTGTAAAG",7,124.84,10.76,-0.01,0.09,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CGTCTGAAGTTAAATG",1,40.04,10.21,-0.55,0.05,2.81,1.02,0,">1 nonsynonymous","D97N Y123R F134S P197T",4
"lib1","SARS-CoV-2","CGTCTGATAACTTATA",2,36.7,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44L A89K G196V",3
"lib1","SARS-CoV-2","CGTCTGGACTACTGGA",6,67.3,6.06,-4.7,0.92,1.5,1.17,0.01,">1 nonsynonymous","V103H Q176T",2
"lib1","SARS-CoV-2","CGTCTGGATGACAGGC",3,0.56,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib1","SARS-CoV-2","CGTCTGGATTAATTAA",1,12.89,10.1,-0.67,0.1,2.91,1.06,0,">1 nonsynonymous","A145Q T201L",2
"lib1","SARS-CoV-2","CGTCTGGGCGCGAGTC",4,59.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49G N110L K199E",3
"lib1","SARS-CoV-2","CGTCTGGGGGATGTAA",5,108.33,10.13,-0.64,0.04,2.91,1.01,0,">1 nonsynonymous","K87T P96E",2
"lib1","SARS-CoV-2","CGTCTGTAACCGGAAA",2,8.32,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","V103R S139D",2
"lib1","SARS-CoV-2","CGTCTGTTAATCCCAC",3,38.71,10.94,0.17,0.09,2.9,1.05,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CGTCTTAATACGCCGA",13,158.23,9.6,-1.16,0.04,2.87,1.07,0,">1 nonsynonymous","L57M T170G",2
"lib1","SARS-CoV-2","CGTCTTCACATTATTA",4,33.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9K C49A C61A Y119L P133S L162E R179Y P197L",8
"lib1","SARS-CoV-2","CGTCTTCGTGTGTAAA",3,31.07,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I28T A33T Q144H V173T",4
"lib1","SARS-CoV-2","CGTCTTGAGAGGCTAT",1,18.57,9.81,-0.95,0.12,1.99,1.03,0.01,"1 nonsynonymous","F8Q",1
"lib1","SARS-CoV-2","CGTGAAAAAACCCGGA",1,8.32,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N1I Y91P D98K N107Q C195Y",5
"lib1","SARS-CoV-2","CGTGAAAGGCTTTTTA",1,46.07,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Q176T V180H",2
"lib1","SARS-CoV-2","CGTGAAATTCAACAGG",5,59.09,9.64,-1.12,0.1,2.75,1.06,0,">1 nonsynonymous","G74K L122S E141T",3
"lib1","SARS-CoV-2","CGTGAATATAAAGGAG",4,47.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A22P G74S T201I",3
"lib1","SARS-CoV-2","CGTGAATTATCAACAC",1,11.58,8.98,-1.78,0.32,1.7,1.04,0.05,">1 nonsynonymous","A89R G155A",2
"lib1","SARS-CoV-2","CGTGACGCCAATTTCA",3,54.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F70V Y121Q S129F C150S P161V",5
"lib1","SARS-CoV-2","CGTGACTGTACATATA",2,9.61,7.03,-3.73,0.3,1.5,1.04,0.02,">1 nonsynonymous","G51S N130S C158F",3
"lib1","SARS-CoV-2","CGTGACTGTATAAATG",1,11.85,10.7,-0.06,0.08,2.92,1.02,0.01,"1 nonsynonymous","T3F",1
"lib1","SARS-CoV-2","CGTGAGCGGAATACAT",2,18.96,9.99,-0.77,0.21,2.4,1.02,0.02,">1 nonsynonymous","C6D N13H F134W",3
"lib1","SARS-CoV-2","CGTGAGCTCACGATCC",6,36.12,10.72,-0.04,0.06,2.99,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTGATAATGTAACAA",1,25.66,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y21S K56L C61N P82G Y91L",5
"lib1","SARS-CoV-2","CGTGATAGTTCTGAAT",2,5.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13C S69G",2
"lib1","SARS-CoV-2","CGTGATGAAGGCATGG",4,107.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38P Y50P Y123G E154L",4
"lib1","SARS-CoV-2","CGTGATGACGCGGCTG",2,11.07,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","K26S L183N",2
"lib1","SARS-CoV-2","CGTGCCAACGGCAAAT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","T3E Y21K Y123* P149L T201W",5
"lib1","SARS-CoV-2","CGTGCCCATATTATAT",2,23.04,10.87,0.1,0.06,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTGCCTCTAGAACTA",11,3.44,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib1","SARS-CoV-2","CGTGCCTTTTAGGCCT",1,15.31,9.1,-1.67,0.12,2.87,1.14,0,">1 nonsynonymous","G117D P149K F160Y",3
"lib1","SARS-CoV-2","CGTGCGAAAGCACGAG",4,42.65,10.77,0.01,0.07,2.9,1.05,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","CGTGCGATCCCAAGAT",1,51.67,8.28,-2.49,0.13,2.27,1.1,0.01,">1 nonsynonymous","L60M G116L N157L",3
"lib1","SARS-CoV-2","CGTGCTGGCTCGCCTG",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S C61H V77Q D112E T140H G174P",6
"lib1","SARS-CoV-2","CGTGGAAATGCCTAAT",6,91.13,8.83,-1.93,0.1,2.82,1.05,0,">1 nonsynonymous","Q84R L125Q T170M",3
"lib1","SARS-CoV-2","CGTGGACGTTCACACG",1,8.66,7.08,-3.69,0.5,1.5,1.04,0.08,">1 nonsynonymous","G86C P96S K114L V182R",4
"lib1","SARS-CoV-2","CGTGGCATAAGTAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E C61H N130T V180S",4
"lib1","SARS-CoV-2","CGTGGCCCCGGACTCG",1,6.8,9.52,-1.25,0.19,2.34,1,0.01,">1 nonsynonymous","D34T P149W",2
"lib1","SARS-CoV-2","CGTGGCGTACAACGAG",7,81.62,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","S36G S113W L162C V173A",4
"lib1","SARS-CoV-2","CGTGGGAATGCAGCTT",1,101.32,10.25,-0.52,0.04,2.85,1,0,">1 nonsynonymous","V11L L95M",2
"lib1","SARS-CoV-2","CGTGGGGACAATCCAT",6,91.63,9.85,-0.91,0.04,2.84,1.03,0,">1 nonsynonymous","K26L I104L F156N",3
"lib1","SARS-CoV-2","CGTGGTATCTTAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2H G51I G174M K198*",4
"lib1","SARS-CoV-2","CGTGGTTATAAACAGC",3,1.71,NA,NA,NA,NA,NA,NA,"stop","S45Y L60E K87* W106T Y119E",5
"lib1","SARS-CoV-2","CGTGGTTTTAAAATTA",4,15.04,10.85,0.08,0.07,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTGTATCACTGCCCG",5,27.92,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K94S D112S E141F",3
"lib1","SARS-CoV-2","CGTGTGCTTTTTTCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E E10T V20L F47N Y119F",5
"lib1","SARS-CoV-2","CGTGTTAGATAACGAC",4,14.04,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1W S41I T46F F62R P133S",5
"lib1","SARS-CoV-2","CGTGTTTCACAATAGG",2,46.73,8.22,-2.55,0.38,1.5,1,0.05,">1 nonsynonymous","W106C Y178C",2
"lib1","SARS-CoV-2","CGTTAAAAACCAAATA",5,447.33,8.97,-1.79,0.06,2.73,1.11,0,">1 nonsynonymous","D97S Y119R Q176M P197H",4
"lib1","SARS-CoV-2","CGTTAAAACCTGAGCT",1,59.12,9.91,-0.85,0.08,2.52,1.05,0,">1 nonsynonymous","A14D Y121H",2
"lib1","SARS-CoV-2","CGTTAAAACTATAGAA",8,35.31,6,-4.76,0.7,1.5,1.07,0.01,">1 nonsynonymous","N4S Y123C F134D L187R G196Y",5
"lib1","SARS-CoV-2","CGTTAAAACTCCCGAA",3,25.59,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F99I C158Q",2
"lib1","SARS-CoV-2","CGTTAAAAGGTTGACT",5,29.51,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S69F W106K Y159S S184G",4
"lib1","SARS-CoV-2","CGTTAAACCAATGTGA",3,33.18,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V37N K128F Y143P",3
"lib1","SARS-CoV-2","CGTTAAACGTTTAGAT",8,87.34,10.77,0,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTAAACTCATCTTT",12,114.42,8.56,-2.21,0.45,1.5,1,0.08,">1 nonsynonymous","A14P S36W G51I T100V",4
"lib1","SARS-CoV-2","CGTTAAATCATCGGTG",8,36.19,9.55,-1.22,0.14,1.68,1.2,0.01,">1 nonsynonymous","K94L V173R",2
"lib1","SARS-CoV-2","CGTTAAATCCTATTGA",1,15.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L95Q Q168E",2
"lib1","SARS-CoV-2","CGTTAACACACTCGAT",6,46.9,10.95,0.19,0.05,2.92,1.05,0,"1 nonsynonymous","E154R",1
"lib1","SARS-CoV-2","CGTTAACCAATCAGGC",1,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","CGTTAACCCCGTCCCC",3,55.48,8.44,-2.32,0.14,1.88,1.12,0.01,">1 nonsynonymous","D90L V153Q Y165H",3
"lib1","SARS-CoV-2","CGTTAACGTAGAAACC",2,36.82,10.66,-0.11,0.05,2.94,1.05,0,"1 nonsynonymous","S43K",1
"lib1","SARS-CoV-2","CGTTAACTGGACGCCT",1,17.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12S I88V F99I V115W Y123I",5
"lib1","SARS-CoV-2","CGTTAACTTCTACGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6P G86D A105E Y159* Q168G",5
"lib1","SARS-CoV-2","CGTTAAGACCAATAGT",5,0.88,NA,NA,NA,NA,NA,NA,"stop","N24F P96* T201*",3
"lib1","SARS-CoV-2","CGTTAAGATTAACTGT",6,33.69,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D59V L95S",2
"lib1","SARS-CoV-2","CGTTAAGCATTCAAAA",12,212.28,9.91,-0.85,0.08,2.08,1.05,0,">1 nonsynonymous","Y35S G83K N109R E154L",4
"lib1","SARS-CoV-2","CGTTAAGCGCCATAAA",14,10.54,NA,NA,NA,NA,NA,NA,"stop","L38* N64R D90I A105C Y123G",5
"lib1","SARS-CoV-2","CGTTAAGGCCCAAAAA",2,12.88,7.2,-3.56,0.46,1.5,1.07,0.05,">1 nonsynonymous","L57K Y143V G152S",3
"lib1","SARS-CoV-2","CGTTAAGTAAATTAAA",1,13.37,8.97,-1.8,0.1,2.84,1.05,0,">1 nonsynonymous","Y66M Y119L",2
"lib1","SARS-CoV-2","CGTTAATAGATATCAC",4,89.59,9.22,-1.54,0.07,2.83,1.09,0,"1 nonsynonymous","G117D",1
"lib1","SARS-CoV-2","CGTTAATCATGAGCGA",3,27.28,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9C L95P I138Y L183V",4
"lib1","SARS-CoV-2","CGTTAATGAACATACC",6,141.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P149N P177K",2
"lib1","SARS-CoV-2","CGTTAATGGGTTTATA",2,41.1,9.94,-0.83,0.14,2.05,1.14,0.01,">1 nonsynonymous","S36V S129R S139Y",3
"lib1","SARS-CoV-2","CGTTAATTATGCTTGA",3,90.75,10.82,0.05,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTAATTGCGTGTTA",1,0.47,NA,NA,NA,NA,NA,NA,"stop","K56* N64H K132G S139Y",4
"lib1","SARS-CoV-2","CGTTACAAAAAATCCT",7,55.69,7.67,-3.09,0.43,1.5,1.21,0.05,">1 nonsynonymous","R25G S43R N107R",3
"lib1","SARS-CoV-2","CGTTACAAACTGATGT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N151Q Q168R K199*",3
"lib1","SARS-CoV-2","CGTTACAAGAAACCCA",2,48.17,6.92,-3.84,0.24,1.5,1.06,0.01,">1 nonsynonymous","L5S F44S Q176T",3
"lib1","SARS-CoV-2","CGTTACAAGCCCGCCA",5,99.46,9.74,-1.02,0.09,2.18,1.05,0,"1 nonsynonymous","L38C",1
"lib1","SARS-CoV-2","CGTTACAATCATTAGT",4,25.84,8.88,-1.89,0.14,1.72,1.03,0.01,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","CGTTACACTTTGGGGT",3,22.21,7.94,-2.82,0.19,2.22,1.11,0.01,">1 nonsynonymous","N107L K114V",2
"lib1","SARS-CoV-2","CGTTACAGAAATACAA",4,31.7,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N58M F99H C158G",3
"lib1","SARS-CoV-2","CGTTACAGTAATTGAA",1,12.82,10.53,-0.23,0.15,2.84,1.16,0.01,"1 nonsynonymous","A192C",1
"lib1","SARS-CoV-2","CGTTACATGGCCATAT",4,57.23,9.92,-0.85,0.09,2.15,1.04,0,">1 nonsynonymous","I28L G51I",2
"lib1","SARS-CoV-2","CGTTACCCTCGCTGGT",1,56.99,10.72,-0.04,0.05,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTACCGAATAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S108*",1
"lib1","SARS-CoV-2","CGTTACGAGGTTAGAC",5,40.13,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L162W T170R",2
"lib1","SARS-CoV-2","CGTTACGCTGAAGCCA",1,9.94,9.35,-1.41,0.31,1.74,1.16,0.05,">1 nonsynonymous","I28L P82V G174P",3
"lib1","SARS-CoV-2","CGTTACGGGGGAGAAG",2,0.19,NA,NA,NA,NA,NA,NA,"stop","R78Q K128* L162Y",3
"lib1","SARS-CoV-2","CGTTACGTACCTTCAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","Y121* Q168A Y175*",3
"lib1","SARS-CoV-2","CGTTACGTGACTTATA",8,97.68,10.7,-0.06,0.06,2.9,1.07,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","CGTTACTAGAAAGAAT",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P R136M V173K K198L",4
"lib1","SARS-CoV-2","CGTTACTAGCTTTGGT",4,2.4,NA,NA,NA,NA,NA,NA,"stop","P7Q C102* R127V Q144T",4
"lib1","SARS-CoV-2","CGTTACTAGGTCAACA",1,16.37,10.72,-0.04,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTACTCTAAGAACG",3,13.48,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103G S129L P149V Q176L",4
"lib1","SARS-CoV-2","CGTTACTGTACTTCGA",3,65.26,10.75,-0.02,0.1,2.9,1.06,0,">1 nonsynonymous","R16Y D97F N130K H189S",4
"lib1","SARS-CoV-2","CGTTAGAACACACAAT",2,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105R L131E L162G",3
"lib1","SARS-CoV-2","CGTTAGAATTGCACAA",2,53.29,10.09,-0.67,0.06,2.88,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","CGTTAGACTAAACGAT",8,78.52,10.65,-0.11,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTAGAGGAGAAAGT",1,6.24,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","P7A A14L V77L A145P N157W",5
"lib1","SARS-CoV-2","CGTTAGATAAAAGACA",3,69.03,10.61,-0.16,0.03,2.91,1.04,0,">1 nonsynonymous","C61Y P149N",2
"lib1","SARS-CoV-2","CGTTAGCGCTAAGCAC",3,20.22,10.77,0.01,0.08,2.8,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTAGCTATGTGCCG",9,98.33,10.65,-0.11,0.03,2.92,1,0,">1 nonsynonymous","A22R N64L N171T",3
"lib1","SARS-CoV-2","CGTTAGGATTGCTTCT",1,70.43,10.29,-0.47,0.04,2.97,1,0,">1 nonsynonymous","E10I C61K T193I",3
"lib1","SARS-CoV-2","CGTTAGGGATCTGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib1","SARS-CoV-2","CGTTAGGGCACTCAAT",8,72.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P133L L162W G174M",3
"lib1","SARS-CoV-2","CGTTAGTAAAATGAAT",3,32.3,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5N R27W Y91M P161R",4
"lib1","SARS-CoV-2","CGTTAGTAAAGCGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","E141N G152* F156M T193Y V194G",5
"lib1","SARS-CoV-2","CGTTAGTAGCAAAAAG",5,31.05,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L60I A89M R127I P149S",4
"lib1","SARS-CoV-2","CGTTAGTAGTACTACA",11,109.05,9.5,-1.26,0.05,2.87,1.08,0,">1 nonsynonymous","F8I F156I G174D",3
"lib1","SARS-CoV-2","CGTTAGTTGGCGCACC",8,74.89,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","S41L G172R",2
"lib1","SARS-CoV-2","CGTTATAAAAAACCTC",2,30.62,7.42,-3.34,0.27,1.5,1.2,0.02,">1 nonsynonymous","Y66V S113L N120R",3
"lib1","SARS-CoV-2","CGTTATAAAAATAAGC",3,85.93,10.16,-0.61,0.06,2.68,1,0,">1 nonsynonymous","A18G E141R P149L",3
"lib1","SARS-CoV-2","CGTTATATACGTTCAG",5,40.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17S R27P D137A",3
"lib1","SARS-CoV-2","CGTTATCTGATCATTC",7,65.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3E Y35V G146M P161K",4
"lib1","SARS-CoV-2","CGTTATGAAGATATGG",7,2.67,NA,NA,NA,NA,NA,NA,"stop","V37H C49P L57M F62Y S129C E135* V153R T201H",8
"lib1","SARS-CoV-2","CGTTATGACTCACAAC",2,121.94,10.2,-0.56,0.04,2.85,1,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","CGTTATGCCCAATCCT",5,0.78,NA,NA,NA,NA,NA,NA,"stop","V20L A89V T140Y Y178*",4
"lib1","SARS-CoV-2","CGTTATGTCAGTATAC",5,13.05,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T15K L57W Y119L Y143L",4
"lib1","SARS-CoV-2","CGTTATTAAAGATCAG",1,7.46,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","A22E D112F G155E P197T",4
"lib1","SARS-CoV-2","CGTTATTAATGAATGA",3,63.67,8.82,-1.94,0.11,1.65,1.15,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","CGTTATTACAATACTA",3,13.3,9.57,-1.2,0.23,1.82,1.08,0.02,">1 nonsynonymous","P7L T100D V173I",3
"lib1","SARS-CoV-2","CGTTATTATATCCACG",2,14.8,10.21,-0.56,0.21,2.32,1,0.02,">1 nonsynonymous","S29M P133F",2
"lib1","SARS-CoV-2","CGTTATTCAGCGGGTT",3,32.61,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","W23S S69I G86S F99G L162R",5
"lib1","SARS-CoV-2","CGTTATTCATAGATGC",1,5.63,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","I72E I88A",2
"lib1","SARS-CoV-2","CGTTATTCGTATCACT",9,130.28,6.47,-4.29,0.66,1.5,1.16,0.04,">1 nonsynonymous","C6V D59E N64R T85C Y121L K128Y",6
"lib1","SARS-CoV-2","CGTTCAAATAGAACCA",4,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W A33R Y91G Y143H S164D",5
"lib1","SARS-CoV-2","CGTTCAAATATTTTTG",2,0.82,NA,NA,NA,NA,NA,NA,"stop","P7S R179*",2
"lib1","SARS-CoV-2","CGTTCACGACGATCAG",3,87.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S I142R",2
"lib1","SARS-CoV-2","CGTTCAGAAAGTACAC",3,18.5,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A33Q F62V I80N Y165C T170S",5
"lib1","SARS-CoV-2","CGTTCAGACTCCCTTT",13,126.6,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V52A P82Y K114T V173S",4
"lib1","SARS-CoV-2","CGTTCATACGAAACAC",1,11.89,10.39,-0.37,0.1,2.79,1.02,0,">1 nonsynonymous","E10V T140R",2
"lib1","SARS-CoV-2","CGTTCATCATAGAGTA",6,93.1,10.15,-0.62,0.07,2.76,1,0,">1 nonsynonymous","T46F N58L",2
"lib1","SARS-CoV-2","CGTTCATCCAGGAGAC",1,20.16,10.6,-0.16,0.07,2.91,1.02,0,">1 nonsynonymous","Y35W P54C C61V S129C",4
"lib1","SARS-CoV-2","CGTTCATCGCAACAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y A89S R179W",3
"lib1","SARS-CoV-2","CGTTCCAAATGTTACT",6,233.02,9.85,-0.91,0.1,2.14,1.05,0,"1 nonsynonymous","L38N",1
"lib1","SARS-CoV-2","CGTTCCAACTCTGGCA",5,76.65,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F12S I28K T46V F70E D90A K128H",6
"lib1","SARS-CoV-2","CGTTCCAAGCAGATCA",11,132.62,8.13,-2.64,0.19,1.76,1.14,0.01,">1 nonsynonymous","S108V T170L",2
"lib1","SARS-CoV-2","CGTTCCACGGTCAACG",12,2,NA,NA,NA,NA,NA,NA,"stop","K26G R73* L122T P149K L183N",5
"lib1","SARS-CoV-2","CGTTCCATTAAGCCGA",2,38.2,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N64P T100P K114L G117T",4
"lib1","SARS-CoV-2","CGTTCCCATAAAATCA",3,48.3,6,-4.76,1.8,1.5,1.24,0.03,">1 nonsynonymous","G9P C61Y Y93S",3
"lib1","SARS-CoV-2","CGTTCCGGAGGGGATA",10,83.85,6.07,-4.7,0.53,1.5,1.08,0.01,">1 nonsynonymous","V37K G101F Y121E",3
"lib1","SARS-CoV-2","CGTTCCGTATAGCCGA",4,38.77,7.82,-2.95,0.35,1.5,1.09,0.04,"1 nonsynonymous","A89E",1
"lib1","SARS-CoV-2","CGTTCCTAGAAAACGG",5,20.41,6.35,-4.41,0.36,2.4,1.13,0,">1 nonsynonymous","W106S V180A",2
"lib1","SARS-CoV-2","CGTTCCTCCCAACAAC",9,8.92,NA,NA,NA,NA,NA,NA,"stop","L122* K132R",2
"lib1","SARS-CoV-2","CGTTCGCTACACACCT",3,63.4,8.3,-2.46,0.17,1.8,1.12,0.01,">1 nonsynonymous","A14H T63G Y119W E141D",4
"lib1","SARS-CoV-2","CGTTCTAACAAAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* F62N S69M N110L K199S",5
"lib1","SARS-CoV-2","CGTTCTCAATCCAATA",3,33.12,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K87E L131R Y165A",3
"lib1","SARS-CoV-2","CGTTCTCCCCGTCAAG",1,79.95,9.83,-0.94,0.1,2.21,1.07,0,">1 nonsynonymous","D90C T100W P149A T201E",4
"lib1","SARS-CoV-2","CGTTGAAAACATGGAG",3,73.77,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","W23K L57Y A105W F134C I142V",5
"lib1","SARS-CoV-2","CGTTGAACCTCCAAAT",2,14.42,10.74,-0.02,0.12,2.77,1.2,0.01,"1 nonsynonymous","V153Y",1
"lib1","SARS-CoV-2","CGTTGAATGTACCAAT",3,7.99,9.15,-1.61,0.09,2.82,1.19,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","CGTTGACCACACATAA",3,10.39,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G101I Y121L",2
"lib1","SARS-CoV-2","CGTTGAGGATATCACT",4,52.37,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y35N K94T G166T",3
"lib1","SARS-CoV-2","CGTTGATCAAGACATC",3,132.32,8.48,-2.29,0.13,2.07,1.11,0.01,">1 nonsynonymous","N13T Y39T K56S Y119L",4
"lib1","SARS-CoV-2","CGTTGCAAACAAGACA",6,48.17,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A33W A89L K128R V180F",4
"lib1","SARS-CoV-2","CGTTGCAACTCTTCCC",10,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V S184P",2
"lib1","SARS-CoV-2","CGTTGCAATATTCCTA",5,3.11,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","CGTTGCAATTTTTCCA",4,2.69,NA,NA,NA,NA,NA,NA,"stop","D59S A67Y V77G Y119V K128*",5
"lib1","SARS-CoV-2","CGTTGCAGGATTCATA",1,13.92,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K26T L57R E76T N107M",4
"lib1","SARS-CoV-2","CGTTGCAGGGGTTATT",2,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W I104N P149F",3
"lib1","SARS-CoV-2","CGTTGCATTAACAATA",2,26.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N30S T100N N157T L162K F167L G172T",6
"lib1","SARS-CoV-2","CGTTGCCGTTGGCTGT",6,68.56,6.33,-4.43,0.84,1.5,1.39,0.03,">1 nonsynonymous","I2G N30E T63M A81F",4
"lib1","SARS-CoV-2","CGTTGCGATATTCAAG",1,22.51,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I2A C31G D137M G155V T201E",5
"lib1","SARS-CoV-2","CGTTGCTATAAACAAG",4,103.95,8.36,-2.4,0.13,1.87,1.12,0.01,"1 nonsynonymous","D112Y",1
"lib1","SARS-CoV-2","CGTTGGCAATAAACAG",6,0,NA,NA,NA,NA,NA,NA,"stop","N1* F44K D90T R127*",4
"lib1","SARS-CoV-2","CGTTGGGCCCATACAC",7,66.72,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N64S N92T Y165D V173H",4
"lib1","SARS-CoV-2","CGTTGGTACCTTTCGT",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L S43I N107A K132S Y175T",5
"lib1","SARS-CoV-2","CGTTGGTCTAAGCCAC",14,133.03,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D90R L131Q E154G Q163R",4
"lib1","SARS-CoV-2","CGTTGTAAATTAAGTA",3,73.83,6.74,-4.02,0.12,2.23,1.11,0,">1 nonsynonymous","L38I K87D F126N S200E",4
"lib1","SARS-CoV-2","CGTTGTAATGATTCCA",1,11.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V71E Y93R T100V P169L",4
"lib1","SARS-CoV-2","CGTTGTACAAAATAGT",6,57.76,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","W106A E141F G146T",3
"lib1","SARS-CoV-2","CGTTGTATGATCCGAG",5,59.76,10.32,-0.45,0.07,2.87,1,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","CGTTGTCATTTAGACT",5,1.94,NA,NA,NA,NA,NA,NA,"stop","L122* P161A S184L",3
"lib1","SARS-CoV-2","CGTTGTCCTCATCAAA",2,1.86,NA,NA,NA,NA,NA,NA,"stop","Y35* F44L Y119L F126G E141T L162R P169R",7
"lib1","SARS-CoV-2","CGTTGTGCAGCAACAA",1,44.23,10.28,-0.49,0.06,2.87,1,0,">1 nonsynonymous","F8V V37D",2
"lib1","SARS-CoV-2","CGTTGTTACTCCCTAA",1,34.48,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G101D I142E",2
"lib1","SARS-CoV-2","CGTTGTTTTGTCCTGG",3,11.61,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","N58M F99H C158G",3
"lib1","SARS-CoV-2","CGTTTAAATTTATATC",2,80.42,9.56,-1.2,0.05,2.91,1.06,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","CGTTTAACCCCGGCTT",3,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98H K114A Y175L",3
"lib1","SARS-CoV-2","CGTTTAAGATGGTGCA",1,7.23,9.4,-1.37,0.22,2.28,1,0.03,">1 nonsynonymous","N4W N64H K87P L122Q F185A",5
"lib1","SARS-CoV-2","CGTTTAAGCGAAAACG",5,91.31,10.14,-0.62,0.05,2.75,1.06,0,">1 nonsynonymous","P7Y K56Y",2
"lib1","SARS-CoV-2","CGTTTAAGCGTTGGAC",2,34.5,10.39,-0.38,0.05,2.82,1.07,0,">1 nonsynonymous","T3S N64G P149V",3
"lib1","SARS-CoV-2","CGTTTACACAATCTAT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35* N107S P177A",3
"lib1","SARS-CoV-2","CGTTTACATATCACAG",1,6.32,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","S19K N40K C49S C61R P82R F185K",6
"lib1","SARS-CoV-2","CGTTTACCAAATACGA",5,28.17,10.63,-0.13,0.05,2.91,1.04,0,">1 nonsynonymous","Y39H P54S",2
"lib1","SARS-CoV-2","CGTTTAGCTCTCTCTA",4,76.3,10.83,0.07,0.09,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CGTTTATAGAAACCTT",4,1.99,NA,NA,NA,NA,NA,NA,"stop","N4H T85A D90N G101*",4
"lib1","SARS-CoV-2","CGTTTATCAAGAGCCA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","F8T N58S S69V W106*",4
"lib1","SARS-CoV-2","CGTTTATGCAGTTACA",1,6.41,NA,NA,NA,NA,NA,NA,"stop","N4L A22V F62V W106* K114R Y121T",6
"lib1","SARS-CoV-2","CGTTTATGCATACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F12* Y91V",2
"lib1","SARS-CoV-2","CGTTTATTAGAAGCAT",2,106.95,10.51,-0.26,0.04,2.94,1.02,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CGTTTATTGTGACGAC",2,38.66,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y21D G51D A89G S139W",4
"lib1","SARS-CoV-2","CGTTTCAAATTAAAAA",13,87.7,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F8T K56T F62S Y143Q",4
"lib1","SARS-CoV-2","CGTTTCCAGGTTAAGC",7,37.54,10.73,-0.03,0.05,2.93,1,0,">1 nonsynonymous","T55E T201R",2
"lib1","SARS-CoV-2","CGTTTCGGCTACCAAC",7,46.39,8.49,-2.28,0.22,1.5,1.07,0.02,">1 nonsynonymous","L5P V37E V181Y",3
"lib1","SARS-CoV-2","CGTTTCTACACATTTG",9,56.6,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A14L V52A I104T N118F Y165P V173K",6
"lib1","SARS-CoV-2","CGTTTCTTGGATTGCA",4,95.1,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S19I V52F R127Q H189N",4
"lib1","SARS-CoV-2","CGTTTGATGGATCACC",2,66.94,10.69,-0.07,0.03,2.97,1.01,0,">1 nonsynonymous","K48H S129T F160Y",3
"lib1","SARS-CoV-2","CGTTTGGGTCTCTGTC",2,24.05,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C49D N118S",2
"lib1","SARS-CoV-2","CGTTTGGTAGTGTCAA",7,214.26,10.33,-0.43,0.04,2.91,1,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","CGTTTGTAACTGTAGT",2,39.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3R T63I D68T D90G F134D",5
"lib1","SARS-CoV-2","CGTTTTAAATGAAGGC",3,31.59,9.96,-0.81,0.11,1.93,1.01,0,">1 nonsynonymous","D90L W106Q",2
"lib1","SARS-CoV-2","CGTTTTAATAAATTTA",3,94.98,10.67,-0.1,0.04,2.88,1.06,0,">1 nonsynonymous","F160R V180I",2
"lib1","SARS-CoV-2","CGTTTTAATCTGCGAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","K56S L131*",2
"lib1","SARS-CoV-2","CGTTTTACATAAACGC",2,5.27,NA,NA,NA,NA,NA,NA,"stop","N64L S184*",2
"lib1","SARS-CoV-2","CGTTTTATTCAGTCCG",1,20.07,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","V11E R25T F62A D98S G116Y G196E",6
"lib1","SARS-CoV-2","CGTTTTCAAGTAAGCC",6,55.5,6.18,-4.59,0.67,1.5,1.16,0.01,">1 nonsynonymous","F8L Y50A T63I E141I G146W",5
"lib1","SARS-CoV-2","CGTTTTCCTGGATGGG",1,60.07,10.65,-0.12,0.08,2.94,1.04,0,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","CGTTTTCGATAACGGG",5,60.02,10.28,-0.48,0.06,2.78,1.01,0,">1 nonsynonymous","G83V V153H",2
"lib1","SARS-CoV-2","CGTTTTCGCAACACAA",6,42.09,9.88,-0.89,0.14,2.31,1,0.01,">1 nonsynonymous","D98P N120R F185L",3
"lib1","SARS-CoV-2","CGTTTTCGTGCTTAGC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","P7H V11L R25N R124Y P149*",5
"lib1","SARS-CoV-2","CGTTTTCTCTAGTACA",1,16.24,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S43P A67D P96D P161G",4
"lib1","SARS-CoV-2","CGTTTTGACCAGCATC",3,93.41,9.38,-1.39,0.1,2.78,1.12,0,">1 nonsynonymous","R27L G117E",2
"lib1","SARS-CoV-2","CGTTTTGCCCTGGTGC",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I C61F A67G L95D N107H N130C S139V K199R",8
"lib1","SARS-CoV-2","CGTTTTGGGTGAACTG",3,366.39,10.23,-0.53,0.03,2.85,1,0,">1 nonsynonymous","D34R F62I",2
"lib1","SARS-CoV-2","CGTTTTTCTAATATAG",3,0.35,NA,NA,NA,NA,NA,NA,"stop","Y119G F126L I138*",3
"lib1","SARS-CoV-2","CGTTTTTCTTACAACC",1,18.78,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","C49P G83V A145W",3
"lib1","SARS-CoV-2","CGTTTTTTCGAGGGTG",1,47.82,10.74,-0.02,0.05,2.94,1.01,0,">1 nonsynonymous","F160R V180I",2
"lib1","SARS-CoV-2","CTAAAAAAAAATTATC",1,15.55,7.74,-3.02,0.39,1.5,1.31,0.06,">1 nonsynonymous","C6I G51T N58G",3
"lib1","SARS-CoV-2","CTAAAAAAAATAACCA",1,58.13,10.76,0,0.05,2.94,1.05,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","CTAAAAAAACACCTAA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","C6Q S19K S43V S129H Y165*",5
"lib1","SARS-CoV-2","CTAAAAAAACAGCGGA",4,101.68,6.89,-3.88,0.23,1.5,1.15,0.01,">1 nonsynonymous","S139N F160L Y175D",3
"lib1","SARS-CoV-2","CTAAAAAAACGTACCA",2,19.84,10.52,-0.24,0.06,2.8,1.07,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","CTAAAAAAATAACCAT",1,14.85,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","T55E N64I S113L P133R",4
"lib1","SARS-CoV-2","CTAAAAAAATACCCGG",7,56.11,10.79,0.03,0.08,2.9,1.05,0,">1 nonsynonymous","Y35I T201Q",2
"lib1","SARS-CoV-2","CTAAAAAAATCCCACG",3,84.91,10.58,-0.18,0.07,2.91,1.02,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","CTAAAAAACAAAAAGT",7,101.63,10.15,-0.61,0.04,2.73,1.04,0,">1 nonsynonymous","N24G N40W",2
"lib1","SARS-CoV-2","CTAAAAAACCAAACCA",7,91.29,10.47,-0.29,0.06,2.83,1.04,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","CTAAAAAACGCGCACA",7,1.58,NA,NA,NA,NA,NA,NA,"stop","C61K P133Q Y175* S184I",4
"lib1","SARS-CoV-2","CTAAAAAAGAACTCTG",1,40.32,10.64,-0.13,0.08,2.96,1,0,">1 nonsynonymous","C61A S164T T201L",3
"lib1","SARS-CoV-2","CTAAAAAAGCTATGGA",5,54.33,9.74,-1.03,0.1,2.15,1.05,0,">1 nonsynonymous","N4V D75G A89S",3
"lib1","SARS-CoV-2","CTAAAAAATATTTCGG",4,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N I80R G83L G86V",4
"lib1","SARS-CoV-2","CTAAAAAATTCCTTAC",2,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C G51D L95Y T170I",4
"lib1","SARS-CoV-2","CTAAAAAATTGTATGA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R S113N S129R N130V C150M",5
"lib1","SARS-CoV-2","CTAAAAAATTTTAACC",16,139.28,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y50C A81C Y119V",3
"lib1","SARS-CoV-2","CTAAAAACAAATAATT",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149C P177L",2
"lib1","SARS-CoV-2","CTAAAAACCACACAAG",8,54.92,9.83,-0.94,0.11,2.4,1.08,0,">1 nonsynonymous","T15M N130G",2
"lib1","SARS-CoV-2","CTAAAAACCTACGCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","P54K I72* G83R D98Q L125W P149Y",6
"lib1","SARS-CoV-2","CTAAAAACGCTTTATT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","R27* A42Q T85F",3
"lib1","SARS-CoV-2","CTAAAAACTAGTAAGG",1,0.68,NA,NA,NA,NA,NA,NA,"stop","I2V I104* G146I",3
"lib1","SARS-CoV-2","CTAAAAACTCGTGTTA",5,87.96,10.03,-0.74,0.07,2.73,1.03,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","CTAAAAACTCTGTACT",2,45.02,9.44,-1.32,0.05,2.85,1.07,0,">1 nonsynonymous","N1S A145F",2
"lib1","SARS-CoV-2","CTAAAAACTTTGGGCG",1,5.6,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F99D L187P P197T",3
"lib1","SARS-CoV-2","CTAAAAAGAATTAGGA",4,17.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D68N V103G S147W",3
"lib1","SARS-CoV-2","CTAAAAAGAGACATGT",1,20.44,6.49,-4.28,0.46,1.5,1.39,0.03,">1 nonsynonymous","T3S V103I F185R",3
"lib1","SARS-CoV-2","CTAAAAAGATCCCATC",4,42.85,10.1,-0.66,0.06,2.93,1,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","CTAAAAAGCCAGGCAT",2,65.23,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37N Q84P Y93G G155V F167W V173K",6
"lib1","SARS-CoV-2","CTAAAAAGCCCTATCA",4,46.14,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44Y N92G N107W K128L Y143G T148W",6
"lib1","SARS-CoV-2","CTAAAAAGTAATGTAA",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S K87L F99S A105G",4
"lib1","SARS-CoV-2","CTAAAAAGTAGCCCCG",13,108.09,7.09,-3.67,0.38,1.5,1.14,0.04,">1 nonsynonymous","L95M L111Y Y143L Q163W K199H",5
"lib1","SARS-CoV-2","CTAAAAATCAGACACT",1,98.45,10.39,-0.37,0.03,2.92,1,0,">1 nonsynonymous","I104T T201C",2
"lib1","SARS-CoV-2","CTAAAAATCCTTGATA",7,91.65,9.52,-1.24,0.05,2.85,1.08,0,">1 nonsynonymous","T100I E154T G174V",3
"lib1","SARS-CoV-2","CTAAAAATGGCGAATG",2,23.43,6,-4.76,2,1.5,1.35,0.04,"1 nonsynonymous","L131W",1
"lib1","SARS-CoV-2","CTAAAAATTAGGTCTG",9,170.09,10.83,0.06,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAAAATTCGAGACA",2,15.58,9.3,-1.46,0.22,1.73,1.08,0.04,">1 nonsynonymous","A89W P197A",2
"lib1","SARS-CoV-2","CTAAAAATTTACCGTG",6,5.02,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S53K A105C S129E C158L",4
"lib1","SARS-CoV-2","CTAAAACAACTCCTGA",3,22.92,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F8S K87G E141H N151S",4
"lib1","SARS-CoV-2","CTAAAACAAGAACTGA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","D34L S41* S200H",3
"lib1","SARS-CoV-2","CTAAAACATAGCACCA",1,53.14,9,-1.76,0.19,1.77,1.19,0.01,">1 nonsynonymous","R73K D90N N107C K132V",4
"lib1","SARS-CoV-2","CTAAAACATAGTTACT",1,36.04,9.37,-1.4,0.09,2.78,1.16,0,">1 nonsynonymous","Y119L S184T",2
"lib1","SARS-CoV-2","CTAAAACATGGCATAA",2,42.15,9.29,-1.47,0.07,2.67,1.09,0,">1 nonsynonymous","R27M T55H Q79E G116D Q168S L187F",6
"lib1","SARS-CoV-2","CTAAAACCCACTTCAA",2,49.05,7.14,-3.63,0.21,1.5,1.15,0.01,">1 nonsynonymous","G9F C150S",2
"lib1","SARS-CoV-2","CTAAAACCGAGGGCTG",2,49.33,7.69,-3.07,0.39,1.5,1.11,0.05,">1 nonsynonymous","F17G S53Y N58I",3
"lib1","SARS-CoV-2","CTAAAACCTCAAGCGA",2,11.77,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C61H V103A D112L",3
"lib1","SARS-CoV-2","CTAAAACGCAACCTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C L131R I138Q",3
"lib1","SARS-CoV-2","CTAAAACGCTATGATT",3,13.84,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","D68E Y93M",2
"lib1","SARS-CoV-2","CTAAAACGGTCCTCTA",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q K48C G86M V103A N120L K199Y",6
"lib1","SARS-CoV-2","CTAAAACGTAAAACCA",3,50.84,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N120H N157S Y165K Y175V",4
"lib1","SARS-CoV-2","CTAAAACGTAACTTAC",2,18.47,10.68,-0.09,0.1,2.83,1.04,0,"1 nonsynonymous","F44M",1
"lib1","SARS-CoV-2","CTAAAACGTCAACTTA",3,24.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y35V P82V A89I N120Y",4
"lib1","SARS-CoV-2","CTAAAACGTCACTTAC",2,25.4,9.84,-0.93,0.08,2.2,1.03,0,">1 nonsynonymous","G9K A81V N109R",3
"lib1","SARS-CoV-2","CTAAAACTAAGTACCA",4,46.08,9.18,-1.58,0.19,1.73,1.13,0.01,">1 nonsynonymous","R78E D90N K132F V182C",4
"lib1","SARS-CoV-2","CTAAAACTCGTAAATG",2,29.06,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F44Y D137T Q176M",3
"lib1","SARS-CoV-2","CTAAAACTGCAACGAC",2,41.74,10.82,0.05,0.08,2.98,1,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","CTAAAACTGTCACTAG",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A P82A G117W G146R",4
"lib1","SARS-CoV-2","CTAAAACTTCCATCTC",1,106.71,10.58,-0.19,0.06,2.9,1.03,0,">1 nonsynonymous","G83E N120K",2
"lib1","SARS-CoV-2","CTAAAACTTCTAAGAA",1,11.87,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34Y I88M F126C E141L Q168N",5
"lib1","SARS-CoV-2","CTAAAACTTCTCGACA",4,0.68,NA,NA,NA,NA,NA,NA,"stop","L131* G166S",2
"lib1","SARS-CoV-2","CTAAAAGAAGTTCCTT",5,130.41,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","D68E R179S",2
"lib1","SARS-CoV-2","CTAAAAGAATCTAGGC",4,46.8,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G86T P96H",2
"lib1","SARS-CoV-2","CTAAAAGAGTTAACCT",2,23.26,6.15,-4.61,0.78,1.5,1.22,0.02,">1 nonsynonymous","L95C L162M S200R",3
"lib1","SARS-CoV-2","CTAAAAGATAAATTGT",2,28.62,6.6,-4.16,0.73,1.5,1.2,0.06,">1 nonsynonymous","S43V N64A A89T N107R S139C",5
"lib1","SARS-CoV-2","CTAAAAGCAAACAAAG",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72M I80M V103Q Y121G P149L",5
"lib1","SARS-CoV-2","CTAAAAGCACCCTAGA",2,33.63,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","C6R S43M N107W D112L",4
"lib1","SARS-CoV-2","CTAAAAGCAGATACCA",4,31.57,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4L S41Q G117T S139P",4
"lib1","SARS-CoV-2","CTAAAAGCAGCTAAAA",4,33.99,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N1L C61P R127L",3
"lib1","SARS-CoV-2","CTAAAAGCATCTTCTT",6,78.05,10.83,0.06,0.07,2.91,1.05,0,"1 nonsynonymous","S200E",1
"lib1","SARS-CoV-2","CTAAAAGCTACTGCAG",4,22.46,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98W I104T R136S F160S S200L",5
"lib1","SARS-CoV-2","CTAAAAGCTTAATGAA",2,18.63,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","G86E N107F",2
"lib1","SARS-CoV-2","CTAAAAGGATCAAATT",4,50.49,6.06,-4.71,0.39,1.5,1.08,0,">1 nonsynonymous","W23E A105I P133V S139I P161N",5
"lib1","SARS-CoV-2","CTAAAAGTAAACGATC",4,34.88,9.19,-1.58,0.17,1.64,1.12,0.02,"1 nonsynonymous","F8K",1
"lib1","SARS-CoV-2","CTAAAAGTAATCTAAT",7,198.41,10.24,-0.52,0.04,2.92,1.02,0,"1 nonsynonymous","K87G",1
"lib1","SARS-CoV-2","CTAAAAGTACAGGACC",5,144.3,10.8,0.03,0.05,2.92,1.03,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","CTAAAAGTAGAAAAAG",2,22.8,6,-4.76,1.82,1.5,1.11,0.01,">1 nonsynonymous","F47S G51L A105M",3
"lib1","SARS-CoV-2","CTAAAAGTCAAGGGAA",6,177.34,7.4,-3.36,0.16,1.5,1.15,0.01,"1 nonsynonymous","Q168P",1
"lib1","SARS-CoV-2","CTAAAATAAAAGCGAG",3,3.29,NA,NA,NA,NA,NA,NA,"stop","N13P A18V D68* N120H",4
"lib1","SARS-CoV-2","CTAAAATAACAAAATA",13,155.37,10.43,-0.34,0.04,2.9,1,0,">1 nonsynonymous","S41W C61I D97N T201Q",4
"lib1","SARS-CoV-2","CTAAAATACCTGAGTC",2,56.19,10.37,-0.4,0.08,2.77,1.05,0,">1 nonsynonymous","P54R Q79H Y175W",3
"lib1","SARS-CoV-2","CTAAAATACTACATCG",5,172.59,10.79,0.03,0.07,2.87,1.07,0,">1 nonsynonymous","I2N N110S T201V",3
"lib1","SARS-CoV-2","CTAAAATAGAGAGGTT",4,41.92,9.52,-1.25,0.12,1.99,1.19,0.01,">1 nonsynonymous","R25T C61T E141K",3
"lib1","SARS-CoV-2","CTAAAATATATCTCTC",3,49.87,6.09,-4.67,0.66,1.5,1.13,0.01,">1 nonsynonymous","S19H K56T R73T D98Q V115T",5
"lib1","SARS-CoV-2","CTAAAATATCGAAATG",10,321.29,8.45,-2.32,0.11,2.63,1.05,0.01,">1 nonsynonymous","F47C I88V L125R",3
"lib1","SARS-CoV-2","CTAAAATCGTGGAAAC",6,58.72,9.88,-0.88,0.05,2.9,1.06,0,">1 nonsynonymous","K114C Y119R",2
"lib1","SARS-CoV-2","CTAAAATGAAATACTG",3,124.03,9.37,-1.39,0.09,2.77,1.09,0,">1 nonsynonymous","N64G K87D K132L",3
"lib1","SARS-CoV-2","CTAAAATGCAATACAC",4,40.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50K P82R I138V",3
"lib1","SARS-CoV-2","CTAAAATGCGTTCTTA",4,66.1,10.74,-0.03,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAAATGTCGATTGC",1,51.91,10.76,0,0.1,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAAATTACTCACAC",2,30,6.16,-4.61,0.57,2.04,1.14,0.01,">1 nonsynonymous","K94F N107Y V115Y",3
"lib1","SARS-CoV-2","CTAAAATTCGCAGCAG",8,47.41,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35I K48S L60F I80T",4
"lib1","SARS-CoV-2","CTAAAATTCGTCTTAC",3,36.83,10.07,-0.7,0.06,2.67,1,0,">1 nonsynonymous","L5S S139I T201V",3
"lib1","SARS-CoV-2","CTAAAATTTGGAATTG",12,202.13,10.61,-0.15,0.05,2.93,1.03,0,">1 nonsynonymous","G83R T148F",2
"lib1","SARS-CoV-2","CTAAACAAATTCATAG",2,23.86,10.6,-0.17,0.07,2.93,1,0,">1 nonsynonymous","I2G N120H N130D",3
"lib1","SARS-CoV-2","CTAAACAACCCCCATT",3,0.5,NA,NA,NA,NA,NA,NA,"stop","R16L L60H E135* G172N",4
"lib1","SARS-CoV-2","CTAAACAACTTCCAAT",3,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G P149M S184N T201G",4
"lib1","SARS-CoV-2","CTAAACAAGCACACCC",2,34.69,7.39,-3.38,0.29,1.5,1.06,0.03,">1 nonsynonymous","I2N A89E",2
"lib1","SARS-CoV-2","CTAAACAAGGAAAACA",1,36.45,10.88,0.12,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACAATAAGACAC",4,1.51,NA,NA,NA,NA,NA,NA,"stop","F44C Y50* D59P Y143I",4
"lib1","SARS-CoV-2","CTAAACAATACAATAT",3,44.14,6.14,-4.63,0.64,2.39,1.18,0.01,">1 nonsynonymous","V103K R179Y",2
"lib1","SARS-CoV-2","CTAAACAATCCATCTA",11,97.23,9.94,-0.83,0.1,1.89,1.08,0,">1 nonsynonymous","V32R L60R V77R L122S",4
"lib1","SARS-CoV-2","CTAAACAATTCAGCCT",10,145.7,7.09,-3.68,0.24,1.5,1.14,0.01,">1 nonsynonymous","T63Q E141R N157C",3
"lib1","SARS-CoV-2","CTAAACACAACCCCAG",4,22.62,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","G51T D90R Y119S K132G I142D",5
"lib1","SARS-CoV-2","CTAAACACACAGACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F V11P K128R G172V A190S",5
"lib1","SARS-CoV-2","CTAAACACCTTTAGCT",3,35.46,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T100L R124N",2
"lib1","SARS-CoV-2","CTAAACACTTATTTAT",2,38.2,9.18,-1.58,0.21,1.54,1.18,0.02,">1 nonsynonymous","G9E S36V L38I Y123T",4
"lib1","SARS-CoV-2","CTAAACAGAATTGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","P54* I72R G152N Y165G",4
"lib1","SARS-CoV-2","CTAAACAGCCAAATTT",7,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K Y121L",2
"lib1","SARS-CoV-2","CTAAACAGCCTGAAAA",1,10.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y K94D",2
"lib1","SARS-CoV-2","CTAAACAGCTTGCGAG",1,11.28,10.76,0,0.11,2.8,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACAGTATATCAA",6,57.24,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N107C G172I",2
"lib1","SARS-CoV-2","CTAAACATAACGATTC",1,6.81,9.92,-0.84,0.32,2.38,1,0.02,"1 nonsynonymous","E135L",1
"lib1","SARS-CoV-2","CTAAACATAATAATAA",7,111.25,10.14,-0.63,0.06,2.73,1.04,0,"1 nonsynonymous","Y21T",1
"lib1","SARS-CoV-2","CTAAACATCCTGGAAC",8,131.71,10.22,-0.54,0.05,2.9,1,0,">1 nonsynonymous","I28W N64L F134L A192E",4
"lib1","SARS-CoV-2","CTAAACATGATTCCTG",2,5.87,NA,NA,NA,NA,NA,NA,"stop","S108Y S129D K198*",3
"lib1","SARS-CoV-2","CTAAACATTCAATGAA",8,148.36,9.21,-1.55,0.12,1.6,1.13,0.01,">1 nonsynonymous","G9W D68T",2
"lib1","SARS-CoV-2","CTAAACATTCACAAGG",2,13.31,9.91,-0.86,0.23,2.42,1.04,0.01,">1 nonsynonymous","A33M W106A",2
"lib1","SARS-CoV-2","CTAAACATTGAACCAC",13,111.23,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","D137V G172K",2
"lib1","SARS-CoV-2","CTAAACATTGACACTT",13,265.37,10.41,-0.36,0.04,2.92,1.05,0,">1 nonsynonymous","R27P K87I",2
"lib1","SARS-CoV-2","CTAAACATTGTTACTC",3,39.68,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P7E A81L L95S G101I",4
"lib1","SARS-CoV-2","CTAAACCAACCCACGG",1,1.82,NA,NA,NA,NA,NA,NA,"stop","Y50* A89Y Y119M",3
"lib1","SARS-CoV-2","CTAAACCATGCTATTC",4,0,NA,NA,NA,NA,NA,NA,"stop","A18F T55Y A105Q Y165*",4
"lib1","SARS-CoV-2","CTAAACCCCGATGGAA",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K N64L G86Q G174R P197F",5
"lib1","SARS-CoV-2","CTAAACCCGCTAAGCT",5,0.6,NA,NA,NA,NA,NA,NA,"stop","I2* A42L A89T G166L",4
"lib1","SARS-CoV-2","CTAAACCGAAAAAACA",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L V20W S45L",3
"lib1","SARS-CoV-2","CTAAACCGCAAAGGTA",1,34.27,10.55,-0.21,0.04,2.89,1.02,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","CTAAACCGGTAAAAGT",7,78.66,10.79,0.02,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACCGTAAACCTA",5,0.55,NA,NA,NA,NA,NA,NA,"stop","I2S A18V G83D R124* S164H V180L",6
"lib1","SARS-CoV-2","CTAAACCGTTTTTTTG",1,16.22,6.32,-4.45,0.48,1.5,1.06,0.01,">1 nonsynonymous","G9V N92P V153T",3
"lib1","SARS-CoV-2","CTAAACCTAGTCACAA",3,18.35,6.9,-3.87,0.67,2.07,1.05,0.07,">1 nonsynonymous","S45I N64M Y91S Y121N",4
"lib1","SARS-CoV-2","CTAAACCTCAACACCT",1,99.96,10.7,-0.06,0.04,2.94,1.03,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","CTAAACCTCTAAAGGC",3,0.11,NA,NA,NA,NA,NA,NA,"stop","Y143T N157*",2
"lib1","SARS-CoV-2","CTAAACCTGAACGCGG",2,16.1,9.7,-1.06,0.32,1.5,1,0.07,">1 nonsynonymous","G9S F99I G152F",3
"lib1","SARS-CoV-2","CTAAACCTTGCATACC",4,45.99,10.89,0.12,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACCTTGTATGAC",2,22.85,6,-4.76,2,3,1.28,0,">1 nonsynonymous","T85M E141V Y165R",3
"lib1","SARS-CoV-2","CTAAACGAAACCAAAA",1,19.6,10.64,-0.13,0.1,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACGAAGTTAGAA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K C61G N109F P149F",4
"lib1","SARS-CoV-2","CTAAACGAGGCTTAAA",6,53.26,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","A18L R25V K56G D98Y",4
"lib1","SARS-CoV-2","CTAAACGATGCCGAAA",4,72.99,7.01,-3.75,0.41,1.5,1.16,0.03,">1 nonsynonymous","Q79H Y175M",2
"lib1","SARS-CoV-2","CTAAACGATGTAGTGC",4,83.61,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V77L K87W G101L S108G N120P",5
"lib1","SARS-CoV-2","CTAAACGATTGAGTCC",3,44.67,10.74,-0.03,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACGGAAAATTTA",7,165.11,10.67,-0.09,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAACGGATATACAG",17,390.54,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P177L K199Y",2
"lib1","SARS-CoV-2","CTAAACGGCAATATTT",8,260.34,8.41,-2.35,0.14,2.59,1.1,0.01,">1 nonsynonymous","A22K V37R N157R",3
"lib1","SARS-CoV-2","CTAAACTAACCGACAA",2,10.08,6.16,-4.6,1.85,1.5,1.15,0.08,">1 nonsynonymous","G9R T46A F99M F156S V173Y",5
"lib1","SARS-CoV-2","CTAAACTAAGAAAAAC",3,1.42,NA,NA,NA,NA,NA,NA,"stop","V37G T55* T63R I142T",4
"lib1","SARS-CoV-2","CTAAACTACTAATACT",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I Y39G C49S N58A",4
"lib1","SARS-CoV-2","CTAAACTAGCGTATAC",2,27.98,10.44,-0.32,0.1,2.74,1.18,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CTAAACTATGAGTAAA",6,52.51,6.65,-4.12,0.43,1.5,1.22,0.03,">1 nonsynonymous","Y93K N151L",2
"lib1","SARS-CoV-2","CTAAACTATTCTCGCA",1,6.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K G116Q",2
"lib1","SARS-CoV-2","CTAAACTGGATGTACA",2,53.62,8.75,-2.01,0.06,2.79,1.12,0,">1 nonsynonymous","N58H G117L",2
"lib1","SARS-CoV-2","CTAAACTGGCGCTGGC",2,5.69,9.1,-1.67,0.36,2.35,1.45,0.03,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","CTAAACTTGGAAAACA",6,51.38,10.65,-0.11,0.07,2.94,1.03,0,">1 nonsynonymous","V173M T193I",2
"lib1","SARS-CoV-2","CTAAACTTTCAACGCC",10,27.42,6,-4.76,1.58,3,1.27,0.01,">1 nonsynonymous","T15L S19L C102M",3
"lib1","SARS-CoV-2","CTAAAGAAAAACATAA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T C102Y E135G P149H",4
"lib1","SARS-CoV-2","CTAAAGAAACATAATG",4,34.49,8.44,-2.32,0.29,1.62,1.22,0.04,">1 nonsynonymous","Y50F K56Y F99Q I104H I142N G152V",6
"lib1","SARS-CoV-2","CTAAAGAAGCCTACAT",4,59.93,9.22,-1.54,0.08,2.4,1.09,0,">1 nonsynonymous","N24K D98Q N118F",3
"lib1","SARS-CoV-2","CTAAAGAAGTGTGCAA",2,30.38,6.06,-4.7,0.7,1.5,1.17,0.01,">1 nonsynonymous","S41P D90I S129F R179Y",4
"lib1","SARS-CoV-2","CTAAAGAATAAGAATG",1,6.54,10.82,0.06,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAAGACAAGAAAAG",2,11.39,9.89,-0.87,0.16,2.6,1.17,0.02,"1 nonsynonymous","D34F",1
"lib1","SARS-CoV-2","CTAAAGACTTTCCCCA",2,32.94,8.18,-2.59,0.16,1.67,1.14,0.01,">1 nonsynonymous","L5I S19T G116Y S200D",4
"lib1","SARS-CoV-2","CTAAAGAGGAATAAAC",5,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T I88V G101R Q168L",4
"lib1","SARS-CoV-2","CTAAAGATAGCTCATA",2,33.93,7.89,-2.87,0.14,1.5,1.06,0.01,">1 nonsynonymous","N13I Y119F N130R T170S",4
"lib1","SARS-CoV-2","CTAAAGCAAAAATTTA",5,2.2,NA,NA,NA,NA,NA,NA,"stop","T15R T46N L60T F156* Q168V",5
"lib1","SARS-CoV-2","CTAAAGCAAAATGTAT",5,17.03,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F62D V77F K87Y P149L",4
"lib1","SARS-CoV-2","CTAAAGCACTGTAATA",2,10.54,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","T46P Q144F S164L",3
"lib1","SARS-CoV-2","CTAAAGCAGTAGCTAC",5,117.9,10.09,-0.67,0.08,2.7,1.03,0,">1 nonsynonymous","C61V G83V",2
"lib1","SARS-CoV-2","CTAAAGCATCGGTTTC",8,57.58,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R27A P177W",2
"lib1","SARS-CoV-2","CTAAAGCATGAAAATC",7,52.25,6,-4.76,1.54,1.5,1.11,0.01,">1 nonsynonymous","C6R Y93G A145T P161S",4
"lib1","SARS-CoV-2","CTAAAGCCATTTATGA",1,5.43,11.16,0.4,0.16,2.79,1.09,0,">1 nonsynonymous","A18E C61Y E154K P197T",4
"lib1","SARS-CoV-2","CTAAAGCCTTACGTTC",4,71.94,9.23,-1.53,0.1,2.01,1.16,0,">1 nonsynonymous","S43N V77E S129R",3
"lib1","SARS-CoV-2","CTAAAGGAAACACAGG",4,18.6,10.19,-0.57,0.33,1.56,1.05,0.04,">1 nonsynonymous","A89V V103Q F160G",3
"lib1","SARS-CoV-2","CTAAAGGAAAGTCTAA",3,17.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D90L R124G",2
"lib1","SARS-CoV-2","CTAAAGGACAATTTCC",4,5.3,6.62,-4.15,0.44,2.32,1.24,0.02,">1 nonsynonymous","T3N L38Y T46S V52Q",4
"lib1","SARS-CoV-2","CTAAAGGACGGCAAGG",2,33.92,10,-0.76,0.13,2.26,1.08,0.01,">1 nonsynonymous","Y39S S45V T85V",3
"lib1","SARS-CoV-2","CTAAAGGAGAATGTCA",5,12.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2K C6Y S43N P82K I104T",5
"lib1","SARS-CoV-2","CTAAAGGCTTTTATGA",3,26.64,10.83,0.06,0.08,2.96,1.02,0,">1 nonsynonymous","N4A Y21V L122Q",3
"lib1","SARS-CoV-2","CTAAAGGGCTGATGAG",3,54.92,8.52,-2.25,0.11,2.46,1.13,0,">1 nonsynonymous","V65H N130K G155P",3
"lib1","SARS-CoV-2","CTAAAGGGGATCGGTG",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N N58H I104T F134N Y165Q T201Y",6
"lib1","SARS-CoV-2","CTAAAGGTACATGAAC",7,33.83,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D34C S45P C49Y",3
"lib1","SARS-CoV-2","CTAAAGTAAATTTAAT",4,32.91,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S36F F47M P149L Y175L",4
"lib1","SARS-CoV-2","CTAAAGTAATAACAAT",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F L60D G83Y F99H F185H",5
"lib1","SARS-CoV-2","CTAAAGTATACCGGGC",1,42.53,10.17,-0.59,0.09,2.83,1.01,0,">1 nonsynonymous","C6W T15P",2
"lib1","SARS-CoV-2","CTAAAGTCAAGCGTTC",9,37.88,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D90L T100A S129N V153Q R179G",5
"lib1","SARS-CoV-2","CTAAAGTGAATAATCT",1,22.82,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y165C Y175T",2
"lib1","SARS-CoV-2","CTAAAGTGTCAGATGC",5,72.32,8.27,-2.49,0.16,2.15,1.08,0.01,">1 nonsynonymous","L111P G174V",2
"lib1","SARS-CoV-2","CTAAAGTTAAGAGGCG",8,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114M Y123L",2
"lib1","SARS-CoV-2","CTAAAGTTGCCGACTT",8,76.84,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G86F G172L",2
"lib1","SARS-CoV-2","CTAAATAAAAAGACAA",5,98.4,10.14,-0.62,0.04,2.76,1.02,0,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","CTAAATAAACAACGCC",1,46.67,10.08,-0.68,0.12,2.48,1.08,0,">1 nonsynonymous","K56W S129Y",2
"lib1","SARS-CoV-2","CTAAATAAATCTAACA",2,34.79,10.73,-0.04,0.06,2.86,1.05,0,">1 nonsynonymous","V37F Q79K",2
"lib1","SARS-CoV-2","CTAAATAACAAGAGCT",15,60.72,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D68K D98I T100R T140W",4
"lib1","SARS-CoV-2","CTAAATAACTAACCTA",7,91.88,10.31,-0.45,0.05,2.81,1.04,0,">1 nonsynonymous","K56T F134D",2
"lib1","SARS-CoV-2","CTAAATAATAATTAAC",3,70.43,9.88,-0.89,0.1,2.17,1.03,0,">1 nonsynonymous","V37R P54L V65H E141S K198N",5
"lib1","SARS-CoV-2","CTAAATACATCTACCG",4,53.77,10.12,-0.64,0.09,2.48,1.04,0,">1 nonsynonymous","R27F K48M D98T",3
"lib1","SARS-CoV-2","CTAAATACATTACGCG",1,57.57,9.92,-0.85,0.1,2.43,1.05,0,">1 nonsynonymous","A14C Y39P",2
"lib1","SARS-CoV-2","CTAAATACCTAAGTTA",6,69.21,8.47,-2.29,0.13,2.16,1.05,0.01,">1 nonsynonymous","S113H H189I",2
"lib1","SARS-CoV-2","CTAAATACTACCATTC",2,32.53,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A42G T55F D98L Y143N G196A",5
"lib1","SARS-CoV-2","CTAAATACTAGCCAAA",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L S43L S69I D137C T170I T201V",6
"lib1","SARS-CoV-2","CTAAATAGCGTGCTAT",3,8.79,10.3,-0.46,0.21,2.54,1,0.02,">1 nonsynonymous","L5M Y35T T140L Q168A",4
"lib1","SARS-CoV-2","CTAAATAGGACAGAAT",5,30.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P7L V37Y T55G L95G",4
"lib1","SARS-CoV-2","CTAAATAGGTCTCATT",5,127.69,10.56,-0.2,0.04,2.94,1.03,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CTAAATAGGTGTTACT",2,5.49,6.96,-3.81,2,3,1.26,0.01,">1 nonsynonymous","S19T N64G I88S D97Q N120L G166S T201L",7
"lib1","SARS-CoV-2","CTAAATAGGTTCGACT",3,72.58,10.87,0.1,0.07,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAAATAGTATCATCT",7,78.65,10.63,-0.14,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAATATAACATAGA",4,43.47,9.68,-1.09,0.14,2.2,1.05,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","CTAAATATAACCGAAA",5,27.21,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P82V W106T P161F",3
"lib1","SARS-CoV-2","CTAAATATAATGACCA",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N C31W K94W D137F",4
"lib1","SARS-CoV-2","CTAAATATAATTGATT",1,24.74,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","C61P Y91V Y119V V182A",4
"lib1","SARS-CoV-2","CTAAATATAGACCTTT",4,39.23,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","G117N D137F V153P",3
"lib1","SARS-CoV-2","CTAAATATCCCATCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S184Y",2
"lib1","SARS-CoV-2","CTAAATATCTAATGAG",5,68.43,8.23,-2.53,0.1,1.68,1.09,0,">1 nonsynonymous","K56L P161C N171S",3
"lib1","SARS-CoV-2","CTAAATATGTCAAGTA",6,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84T",1
"lib1","SARS-CoV-2","CTAAATATTATAATGA",1,21.43,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F17G F47C A89C",3
"lib1","SARS-CoV-2","CTAAATATTCTGACTG",4,39.19,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T63M D75E I88N G117I D137M",5
"lib1","SARS-CoV-2","CTAAATATTGCCCCCC",1,49.32,10.23,-0.53,0.07,2.87,1.01,0,">1 nonsynonymous","G9W S45R",2
"lib1","SARS-CoV-2","CTAAATCAAACGATGA",4,62.08,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y119L G146L",2
"lib1","SARS-CoV-2","CTAAATCAACATTCTC",5,47.19,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V71P W106N L131D N151S",4
"lib1","SARS-CoV-2","CTAAATCAACGTCAAC",2,6.52,10.6,-0.17,0.43,1.97,1,0.03,">1 nonsynonymous","F62T I88L D98K T201G",4
"lib1","SARS-CoV-2","CTAAATCAACTCTATG",1,8.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y121V F185R",2
"lib1","SARS-CoV-2","CTAAATCAATACTCAG",3,864.59,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6G L95H",2
"lib1","SARS-CoV-2","CTAAATCAGAAACAAA",1,1.33,NA,NA,NA,NA,NA,NA,"stop","V37Q R136A C195*",3
"lib1","SARS-CoV-2","CTAAATCATGCAGTAT",1,8.64,10.82,0.06,0.09,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAATCCAAACAATC",6,42.69,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C49T Y91E G174D",3
"lib1","SARS-CoV-2","CTAAATCCAGAGTGGC",7,66.99,8.74,-2.02,0.17,1.67,1.11,0.01,">1 nonsynonymous","C6G V52E",2
"lib1","SARS-CoV-2","CTAAATCCCAACAGTT",1,55.79,10.71,-0.06,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAATCCGACATAAC",6,55.06,10.69,-0.07,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAATCGATCATAAC",4,21.45,10.8,0.04,0.07,2.99,1,0,"1 nonsynonymous","T100C",1
"lib1","SARS-CoV-2","CTAAATCTCGGTTATC",7,1.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73L",1
"lib1","SARS-CoV-2","CTAAATCTTAAAAATG",2,7.1,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","E135M C158Y G172W",3
"lib1","SARS-CoV-2","CTAAATCTTTATAAAT",10,4,NA,NA,NA,NA,NA,NA,"stop","C31* Y123W V153Y",3
"lib1","SARS-CoV-2","CTAAATCTTTGAATAA",2,58.41,8.35,-2.41,0.18,1.59,1.17,0.01,">1 nonsynonymous","V37H R73M D90V",3
"lib1","SARS-CoV-2","CTAAATGACAAATTTA",5,45.94,9.76,-1.01,0.07,2.87,1.08,0,">1 nonsynonymous","N64P S113G I138M",3
"lib1","SARS-CoV-2","CTAAATGATGGCCATA",6,100.12,10.43,-0.33,0.07,2.79,1.12,0,"1 nonsynonymous","S164L",1
"lib1","SARS-CoV-2","CTAAATGCATATGAAC",2,35.9,10.25,-0.51,0.08,2.71,1,0,">1 nonsynonymous","D90F Y123V Q163K",3
"lib1","SARS-CoV-2","CTAAATGCTGAGCTTA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66W A81G R127Q",3
"lib1","SARS-CoV-2","CTAAATGGAAAACACT",3,0.95,NA,NA,NA,NA,NA,NA,"stop","P96* W106D Y143L",3
"lib1","SARS-CoV-2","CTAAATGGCGTGTTAA",4,42.69,7.33,-3.44,0.26,1.5,1.15,0.02,">1 nonsynonymous","S53R N157V",2
"lib1","SARS-CoV-2","CTAAATGGTCACAGAA",2,44.45,7.37,-3.39,0.34,1.5,1.03,0.04,">1 nonsynonymous","F99S A105Y E154P",3
"lib1","SARS-CoV-2","CTAAATGGTCCGATGT",10,32.34,10.75,-0.01,0.06,2.85,1.1,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","CTAAATGTGCCACCTC",1,92.25,10.2,-0.57,0.04,2.85,1.01,0,"1 nonsynonymous","R136W",1
"lib1","SARS-CoV-2","CTAAATGTGCCTTGTT",3,27.02,11,0.24,0.11,2.84,1.07,0,"1 nonsynonymous","Q163V",1
"lib1","SARS-CoV-2","CTAAATGTTCTGGTGC",2,51.1,8.27,-2.5,0.2,1.5,1.19,0.02,">1 nonsynonymous","L5R V37N L60V E135L T193I",5
"lib1","SARS-CoV-2","CTAAATTAACCTACTG",2,62.37,8.77,-1.99,0.1,2.61,1.15,0,">1 nonsynonymous","S36L A42V Y119V P149L",4
"lib1","SARS-CoV-2","CTAAATTAACTAAATA",9,118.07,10.28,-0.48,0.02,2.93,1.03,0,">1 nonsynonymous","L60M G146A G174D",3
"lib1","SARS-CoV-2","CTAAATTAGAAAAACT",5,26.56,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","C61G R73S G83V E135A V173F",5
"lib1","SARS-CoV-2","CTAAATTAGGAAATGG",3,1107.54,10.21,-0.55,0.03,2.83,1.02,0,">1 nonsynonymous","N4K F44S R78G",3
"lib1","SARS-CoV-2","CTAAATTCCTAAATTA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","P54G D59*",2
"lib1","SARS-CoV-2","CTAAATTCCTGATAAA",3,19.31,6,-4.76,2,1.5,1.3,0.04,"1 nonsynonymous","V71Y",1
"lib1","SARS-CoV-2","CTAAATTCCTGCTATC",1,9.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F62I I80T H189N",3
"lib1","SARS-CoV-2","CTAAATTCGAAACCAA",6,74.13,7.08,-3.68,0.28,1.5,1.11,0.02,">1 nonsynonymous","T3K N109T N130V S139H Y178N",5
"lib1","SARS-CoV-2","CTAAATTCGAGACTAC",6,69.47,9.12,-1.65,0.16,1.55,1.17,0.01,">1 nonsynonymous","I2T N107H F126L",3
"lib1","SARS-CoV-2","CTAAATTGACCTCCCG",19,312.69,9.44,-1.33,0.09,1.79,1.1,0,">1 nonsynonymous","G9C G83V S200A",3
"lib1","SARS-CoV-2","CTAAATTGTATACATT",2,24.17,6.63,-4.13,0.53,1.5,1.16,0.03,">1 nonsynonymous","C6I E76L E135M T201S",4
"lib1","SARS-CoV-2","CTAAATTTAGGAAAAT",1,19.82,10.69,-0.07,0.11,2.97,1,0,">1 nonsynonymous","R16I C195D",2
"lib1","SARS-CoV-2","CTAAATTTATACCTTA",3,28.63,7.51,-3.25,0.19,1.5,1.13,0.01,">1 nonsynonymous","P7I S113V",2
"lib1","SARS-CoV-2","CTAACAAAAATGCGAT",2,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L Y123V N130L K199T",4
"lib1","SARS-CoV-2","CTAACAAAATACCTTT",3,0.57,NA,NA,NA,NA,NA,NA,"stop","S53H V77*",2
"lib1","SARS-CoV-2","CTAACAAACTAGTCTC",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K K56W R73N A81I S113E F134Q F160I Q168T",8
"lib1","SARS-CoV-2","CTAACAAAGGAGACTA",2,15.2,10.42,-0.35,0.07,2.93,1,0,">1 nonsynonymous","Y123R H189Y",2
"lib1","SARS-CoV-2","CTAACAAAGTCAATTG",1,18.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77Y G117E",2
"lib1","SARS-CoV-2","CTAACAAAGTGGAAAC",2,5.34,9.88,-0.89,0.28,2.87,1,0.03,">1 nonsynonymous","T140L Q144V",2
"lib1","SARS-CoV-2","CTAACAACCTACAACT",1,40.08,10.67,-0.09,0.07,2.74,1.21,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","CTAACAACCTATTTCC",6,34.54,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","S36M D112L E141F E154K",4
"lib1","SARS-CoV-2","CTAACAACGCCGAGAG",3,120.73,9.53,-1.24,0.06,2.82,1.06,0,">1 nonsynonymous","R127S F156K",2
"lib1","SARS-CoV-2","CTAACAACTCTAGGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","E76* L125F",2
"lib1","SARS-CoV-2","CTAACAACTTATATGA",5,100.22,10.7,-0.06,0.04,2.9,1.06,0,">1 nonsynonymous","N1T N4R",2
"lib1","SARS-CoV-2","CTAACAAGCCAATATT",3,40.39,10.26,-0.51,0.06,2.72,1.05,0,"1 nonsynonymous","L57S",1
"lib1","SARS-CoV-2","CTAACAAGTCTAATAA",26,643.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3S E141Y C158N Y175S",4
"lib1","SARS-CoV-2","CTAACAAGTTAACCTG",2,35.12,10.95,0.19,0.08,2.85,1.03,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","CTAACAATAAATGAAA",14,102.65,9.57,-1.19,0.1,1.61,1.1,0,"1 nonsynonymous","L95F",1
"lib1","SARS-CoV-2","CTAACAATCACCATAA",7,58.4,10.3,-0.46,0.09,2.77,1.06,0,">1 nonsynonymous","Y178C A190V",2
"lib1","SARS-CoV-2","CTAACAATGTATCCCT",1,32.03,6,-4.76,1.65,1.5,1.18,0.02,">1 nonsynonymous","L95V C158E",2
"lib1","SARS-CoV-2","CTAACAATTTGTCCCC",2,21.45,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","S43L Y50L N107H",3
"lib1","SARS-CoV-2","CTAACACAATAAAAAT",4,6.37,6.1,-4.67,0.81,3,1.02,0.01,">1 nonsynonymous","Y93W C102G T170V",3
"lib1","SARS-CoV-2","CTAACACAATCGTCTT",1,47.31,10.49,-0.27,0.06,2.9,1.06,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","CTAACACACCCAGAAA",9,4.12,NA,NA,NA,NA,NA,NA,"stop","C49* N130L V182R",3
"lib1","SARS-CoV-2","CTAACACAGTAATTAA",6,0.55,NA,NA,NA,NA,NA,NA,"stop","L5* Y50C D97I Y119*",4
"lib1","SARS-CoV-2","CTAACACAGTCCCAGG",5,121.91,10.01,-0.76,0.11,2.52,1.03,0,"1 nonsynonymous","V52G",1
"lib1","SARS-CoV-2","CTAACACATGAGATAA",4,22.92,6,-4.76,2,1.5,1.18,0.05,"1 nonsynonymous","F99P",1
"lib1","SARS-CoV-2","CTAACACCCAAAAGTA",7,49.4,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S43F G83I I88F",3
"lib1","SARS-CoV-2","CTAACACCCGAATTGC",4,125.84,6.91,-3.86,0.24,1.5,1.12,0.01,">1 nonsynonymous","A33W R179N",2
"lib1","SARS-CoV-2","CTAACACGGAGATTGC",2,37.91,10.7,-0.07,0.06,2.97,1,0,">1 nonsynonymous","A22K Y143F",2
"lib1","SARS-CoV-2","CTAACACGTAAAATCC",5,989.02,9.79,-0.97,0.09,1.96,1.02,0,"1 nonsynonymous","V65N",1
"lib1","SARS-CoV-2","CTAACACTTGCAGTCG",5,43.59,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","R124D",1
"lib1","SARS-CoV-2","CTAACAGAAAGACAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50K S184*",2
"lib1","SARS-CoV-2","CTAACAGACCGTACAC",3,47.44,8.29,-2.47,0.18,2.35,1.17,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","CTAACAGCAATACCAT",2,6.76,10.8,0.04,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAACAGCAGATAGAA",4,55.15,10.63,-0.13,0.06,2.86,1.1,0,">1 nonsynonymous","S41R K198L",2
"lib1","SARS-CoV-2","CTAACAGCGAGCGATA",6,2.52,NA,NA,NA,NA,NA,NA,"stop","V77F P82E L122* H189G",4
"lib1","SARS-CoV-2","CTAACAGCGCCCTGCT",3,24.82,6.8,-3.96,0.11,1.89,1.06,0,">1 nonsynonymous","G86M Y123K",2
"lib1","SARS-CoV-2","CTAACAGCTAAAAAAG",3,9.18,10.73,-0.04,0.12,2.96,1,0.01,">1 nonsynonymous","A42S D97L K128H",3
"lib1","SARS-CoV-2","CTAACAGGTGTCCAAC",6,19.43,10.16,-0.6,0.17,2.48,1,0.02,">1 nonsynonymous","G83I P169K",2
"lib1","SARS-CoV-2","CTAACAGTAATATAAT",5,51.33,8.7,-2.07,0.14,2.01,1.13,0.01,">1 nonsynonymous","G116V Y123V A145M T201M",4
"lib1","SARS-CoV-2","CTAACATAAAACAAGT",7,105.43,7.74,-3.03,0.1,1.91,1.15,0,">1 nonsynonymous","T85M N120L Y175A",3
"lib1","SARS-CoV-2","CTAACATAAAATGTAA",1,7.47,6.2,-4.56,1.01,1.5,1.26,0.07,">1 nonsynonymous","V71K F99I T201V",3
"lib1","SARS-CoV-2","CTAACATATAACCTGG",5,135.68,8.35,-2.41,0.12,2.67,1.07,0.01,">1 nonsynonymous","N157C S200V",2
"lib1","SARS-CoV-2","CTAACATATAGGTTAA",2,0.4,NA,NA,NA,NA,NA,NA,"stop","L5P I142R Q168*",3
"lib1","SARS-CoV-2","CTAACATCACGGGAAG",7,4.17,NA,NA,NA,NA,NA,NA,"stop","E10* A42C L122Q N151*",4
"lib1","SARS-CoV-2","CTAACATCATTGGCAA",2,56,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P149R V182Y",2
"lib1","SARS-CoV-2","CTAACATCCAGGTGTG",6,54.15,6.1,-4.67,0.7,1.5,1.21,0.01,">1 nonsynonymous","N40E V52Y D112S Q168Y",4
"lib1","SARS-CoV-2","CTAACATCTAGAGTCA",3,12.48,9.21,-1.56,0.2,1.5,1.07,0.02,">1 nonsynonymous","F17L S45L C61K",3
"lib1","SARS-CoV-2","CTAACATGCACTAAAA",7,151.55,10.64,-0.12,0.04,2.96,1.02,0,"1 nonsynonymous","A22Y",1
"lib1","SARS-CoV-2","CTAACATGCTGGTTTA",6,37.47,10.76,-0.01,0.07,2.91,1.03,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","CTAACATTAACCTCAA",5,50.82,6.38,-4.38,0.51,1.5,1.13,0.02,">1 nonsynonymous","Y35D L60S K87F F126S",4
"lib1","SARS-CoV-2","CTAACATTAAGAGTGG",3,48.02,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S43D I80F S113L",3
"lib1","SARS-CoV-2","CTAACATTAGGTTGCA",4,99.28,10.58,-0.18,0.03,2.91,1.03,0,"1 nonsynonymous","Y35A",1
"lib1","SARS-CoV-2","CTAACATTCGTTAATT",3,0.45,NA,NA,NA,NA,NA,NA,"stop","D59E Y121P K132*",3
"lib1","SARS-CoV-2","CTAACATTTGGCATCG",1,43.67,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12T G51T Y93M N120G P149R F156A",6
"lib1","SARS-CoV-2","CTAACATTTTCTTTAT",7,100.68,10.65,-0.11,0.04,2.91,1.06,0,"1 nonsynonymous","G51K",1
"lib1","SARS-CoV-2","CTAACCAAAAACCCAA",2,28.89,10.77,0,0.07,2.95,1.01,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","CTAACCAAACAGTTGA",2,21.58,9.79,-0.98,0.08,2.68,1,0,">1 nonsynonymous","T63D K128I G174P",3
"lib1","SARS-CoV-2","CTAACCAACACCTCTC",2,45.49,10.18,-0.58,0.04,2.92,1.01,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","CTAACCAAGTAGAGGC",9,153.39,10.73,-0.04,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAACCAATGAACGCA",2,34.62,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S69L G83I D97S",3
"lib1","SARS-CoV-2","CTAACCAATTAATCTC",6,121.65,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G116C C150W Y178S",3
"lib1","SARS-CoV-2","CTAACCAATTGGCCTG",2,144.49,9.17,-1.6,0.09,2.57,1.14,0,">1 nonsynonymous","K26T F44N G152F",3
"lib1","SARS-CoV-2","CTAACCACACGTGAAA",5,159.95,10.51,-0.26,0.04,2.9,1.02,0,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","CTAACCACGATTAATA",6,33.84,7.3,-3.46,0.5,1.5,1.27,0.08,"1 nonsynonymous","L183A",1
"lib1","SARS-CoV-2","CTAACCACGCTTCCTA",4,104.54,8.71,-2.05,0.2,1.5,1.06,0.02,">1 nonsynonymous","W23E V32W",2
"lib1","SARS-CoV-2","CTAACCAGCTAACCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14P C49T A81S T85Y N92M P169* V182L",7
"lib1","SARS-CoV-2","CTAACCAGGGGCCCTG",5,45.54,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V65A A105G G116L R136T T140N A192T",6
"lib1","SARS-CoV-2","CTAACCATACGCAACC",1,403.6,10.76,0,0.05,2.91,1.05,0,"1 nonsynonymous","F160A",1
"lib1","SARS-CoV-2","CTAACCATCAAGGCCT",3,28.35,7.88,-2.89,0.24,1.5,1.15,0.02,"1 nonsynonymous","Y93M",1
"lib1","SARS-CoV-2","CTAACCATCCTTCCTC",15,236.85,10.63,-0.14,0.03,2.87,1.07,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","CTAACCCACTTTGGTC",18,61.75,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y93L P149Q V182P",3
"lib1","SARS-CoV-2","CTAACCCAGTAATGGC",4,36.41,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N64G I88G D98G T148N A190S",5
"lib1","SARS-CoV-2","CTAACCCATAATTCGA",3,55.88,10.75,-0.01,0.03,2.96,1.01,0,"1 nonsynonymous","F44Y",1
"lib1","SARS-CoV-2","CTAACCCCAAAGCAGA",9,5.38,NA,NA,NA,NA,NA,NA,"stop","F8* C31L V103K N130H",4
"lib1","SARS-CoV-2","CTAACCCGCGGCTCAG",1,20.65,10.68,-0.08,0.12,2.84,1.08,0,">1 nonsynonymous","A14S T100I",2
"lib1","SARS-CoV-2","CTAACCCTACCCAATT",6,92.24,6.88,-3.88,0.16,1.55,1.11,0,">1 nonsynonymous","P54L D97W S113E",3
"lib1","SARS-CoV-2","CTAACCCTATTATATA",3,18.04,6,-4.76,0.98,3,1.11,0,">1 nonsynonymous","S36R S43R G83Y W106D K114Q P149D",6
"lib1","SARS-CoV-2","CTAACCGAAACGGCTT",2,12.48,9.09,-1.67,0.27,1.5,1.15,0.03,">1 nonsynonymous","R25Q L162V",2
"lib1","SARS-CoV-2","CTAACCGAACGATCGC",2,91.22,10.69,-0.07,0.05,2.86,1.05,0,">1 nonsynonymous","A33M H189Y",2
"lib1","SARS-CoV-2","CTAACCGAATTATAAG",3,69.63,10.45,-0.32,0.06,2.86,1.01,0,">1 nonsynonymous","V52C R78L",2
"lib1","SARS-CoV-2","CTAACCGAGTCAATAT",5,117.96,9.34,-1.43,0.09,2.7,1.13,0,">1 nonsynonymous","N64K N120T",2
"lib1","SARS-CoV-2","CTAACCTAAACCAAGA",3,48.09,10.49,-0.27,0.06,2.89,1.03,0,">1 nonsynonymous","N64A K87W",2
"lib1","SARS-CoV-2","CTAACCTAATCGGATT",4,53.74,10.73,-0.04,0.09,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAACCTCACTCATCC",6,85.55,10.77,0,0.06,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAACCTCTGGGCGAA",3,24.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T V65I K94G A105I A145M",5
"lib1","SARS-CoV-2","CTAACCTGAGGAAGAG",3,1.54,NA,NA,NA,NA,NA,NA,"stop","A81D G86R L125* S139T C150W",5
"lib1","SARS-CoV-2","CTAACCTTACCTTTAC",5,0.46,NA,NA,NA,NA,NA,NA,"stop","S41N V77* D90T I142P",4
"lib1","SARS-CoV-2","CTAACCTTCAAGGGCG",5,61.32,10.1,-0.66,0.11,2.53,1.01,0,">1 nonsynonymous","G9Q S69R",2
"lib1","SARS-CoV-2","CTAACCTTTTCATGAT",6,43.74,7.51,-3.25,0.24,1.5,1.02,0.01,">1 nonsynonymous","P54H D137K",2
"lib1","SARS-CoV-2","CTAACGAAATGACGAC",3,24.54,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","R25A A81F Y143I E154D Q163N V181A",6
"lib1","SARS-CoV-2","CTAACGAACAATAATC",2,3.86,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTAACGAATCTTGATG",8,292.09,10.2,-0.56,0.05,2.7,1,0,">1 nonsynonymous","F47C K56V",2
"lib1","SARS-CoV-2","CTAACGACAAAATAAT",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K F44I C61T",3
"lib1","SARS-CoV-2","CTAACGAGAGTCCACA",3,33.74,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C61V N107R L131K",3
"lib1","SARS-CoV-2","CTAACGAGTCAACATC",4,50.33,8.42,-2.34,0.24,1.5,1.09,0.02,">1 nonsynonymous","V11A N107S V115Y",3
"lib1","SARS-CoV-2","CTAACGAGTGTAATCG",1,33.24,10.44,-0.33,0.06,2.85,1.08,0,"1 nonsynonymous","D59V",1
"lib1","SARS-CoV-2","CTAACGATCAAGGATG",1,27.98,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","S45N S53R I80K P161F",4
"lib1","SARS-CoV-2","CTAACGATGATAATAT",10,189.84,10.58,-0.18,0.05,2.89,1.07,0,">1 nonsynonymous","I104L A190V",2
"lib1","SARS-CoV-2","CTAACGATGCCTGAAT",3,100.44,9.02,-1.74,0.12,2.03,1.15,0.01,">1 nonsynonymous","Q176K T193Y V194G",3
"lib1","SARS-CoV-2","CTAACGATTCATCGTA",2,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P C61H F99I",3
"lib1","SARS-CoV-2","CTAACGATTTGTGTTC",7,64.18,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14P F167A",2
"lib1","SARS-CoV-2","CTAACGCAATAAACCA",6,20.02,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C49P F62G",2
"lib1","SARS-CoV-2","CTAACGCACTGCCGAT",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V K114T",2
"lib1","SARS-CoV-2","CTAACGCATATAGTCA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","CTAACGCCAACGAGAT",3,38.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150E",1
"lib1","SARS-CoV-2","CTAACGCGAAAGTAAC",6,52.21,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F62T Y93T",2
"lib1","SARS-CoV-2","CTAACGCTATCCTGCT",4,27.38,7.87,-2.89,0.34,1.5,1.21,0.03,">1 nonsynonymous","A22T K94Q T148E G155S K199M",5
"lib1","SARS-CoV-2","CTAACGCTGCGATTCC",7,26.5,9.7,-1.06,0.2,1.96,1.15,0.02,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","CTAACGGAAAGTTAGG",4,43.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83A A89L",2
"lib1","SARS-CoV-2","CTAACGGACGTATAAT",1,68.13,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G83V Q176V",2
"lib1","SARS-CoV-2","CTAACGGGATGAAAAT",2,7084.28,10.73,-0.03,0.04,2.94,1.03,0,"1 nonsynonymous","E141N",1
"lib1","SARS-CoV-2","CTAACGGTAAAAGTAA",2,9.66,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C49D F167M",2
"lib1","SARS-CoV-2","CTAACGTATACTGTAT",6,152.49,6,-4.76,1.62,1.5,1.21,0.01,">1 nonsynonymous","C6D D59N G83C P177S",4
"lib1","SARS-CoV-2","CTAACGTTACCTCTAA",8,2.01,NA,NA,NA,NA,NA,NA,"stop","I104C N107S C150V L162F S184*",5
"lib1","SARS-CoV-2","CTAACGTTTAATGAAA",5,45.37,10.03,-0.74,0.17,1.53,1.07,0.01,">1 nonsynonymous","N13M K128W",2
"lib1","SARS-CoV-2","CTAACGTTTTTGTCTA",1,25.03,10.04,-0.72,0.07,2.62,1,0,">1 nonsynonymous","D90S Y121F V180I T201F",4
"lib1","SARS-CoV-2","CTAACTAAACTTTCGA",1,8.98,10.92,0.16,0.07,2.86,1.09,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","CTAACTAACAACAGCC",1,15.67,10.97,0.21,0.08,2.89,1.06,0,"1 nonsynonymous","N130K",1
"lib1","SARS-CoV-2","CTAACTAAGAAATAGA",5,61.93,9.91,-0.86,0.05,2.92,1,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","CTAACTAAGAGAACAT",2,12.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14R L57S E154N C158R",4
"lib1","SARS-CoV-2","CTAACTACATCAGGAT",3,39.37,9.61,-1.15,0.11,2.5,1.05,0.01,">1 nonsynonymous","V173P S184L",2
"lib1","SARS-CoV-2","CTAACTACCGATCTAG",3,83.81,6.8,-3.97,0.22,2.15,1.17,0.01,"1 nonsynonymous","C150D",1
"lib1","SARS-CoV-2","CTAACTACGCAGACTT",3,30.9,10.4,-0.36,0.05,2.94,1,0,">1 nonsynonymous","R27K Y35I E135R",3
"lib1","SARS-CoV-2","CTAACTACGCTAAAGT",12,109.71,8.56,-2.21,0.12,2.59,1.09,0.01,">1 nonsynonymous","N64G I142D",2
"lib1","SARS-CoV-2","CTAACTAGGAGTTAAG",4,58.53,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7V Y35A L60T N107E Y119L",5
"lib1","SARS-CoV-2","CTAACTATACTTGAGA",4,6.2,10.85,0.08,0.18,2.83,1.1,0.01,"1 nonsynonymous","Y121Q",1
"lib1","SARS-CoV-2","CTAACTATATCGCAGT",5,62.71,10.73,-0.03,0.07,2.88,1.11,0,">1 nonsynonymous","G9D Y39I D59E N151T",4
"lib1","SARS-CoV-2","CTAACTATCATTTACA",6,0.21,NA,NA,NA,NA,NA,NA,"stop","N1P S43T D97E N107V Y143*",5
"lib1","SARS-CoV-2","CTAACTATCTAAATAT",5,151.78,10.27,-0.49,0.04,2.8,1,0,">1 nonsynonymous","S45D S139Y",2
"lib1","SARS-CoV-2","CTAACTATGGCTCAAT",7,0.2,NA,NA,NA,NA,NA,NA,"stop","S19* Y93* S113*",3
"lib1","SARS-CoV-2","CTAACTATTGGGTTTT",10,83.01,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","R27T Y35C L60E A67P D90F V103H F160P",7
"lib1","SARS-CoV-2","CTAACTCAATAATGGA",3,63.88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19P N24V G74E Y91L A105I V173Q",6
"lib1","SARS-CoV-2","CTAACTCACAGCCCGG",3,26.11,7.58,-3.18,0.2,1.5,1.08,0.02,">1 nonsynonymous","N1S S19V G166S",3
"lib1","SARS-CoV-2","CTAACTCACAGTCAAG",1,5.31,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","P7T N40G P96V",3
"lib1","SARS-CoV-2","CTAACTCGACCCCTTA",9,132.64,9.83,-0.94,0.07,2.14,1.06,0,">1 nonsynonymous","F8P D59N",2
"lib1","SARS-CoV-2","CTAACTCTACTCCTAT",5,1.19,NA,NA,NA,NA,NA,NA,"stop","A33* C49Y K128D",3
"lib1","SARS-CoV-2","CTAACTCTTATTAAAT",1,38.14,10.03,-0.74,0.07,2.66,1.09,0,"1 nonsynonymous","L131C",1
"lib1","SARS-CoV-2","CTAACTGAAAAGGGCA",1,63.93,10.57,-0.19,0.03,2.98,1,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","CTAACTGACTTCTCTT",2,15.05,9.97,-0.79,0.22,2.04,1.11,0.02,">1 nonsynonymous","L38R T201R",2
"lib1","SARS-CoV-2","CTAACTGGGCCTTGAT",1,21.97,6.09,-4.67,0.84,1.5,1.26,0.02,">1 nonsynonymous","I2P V37K S43L G51F R73S D90S",6
"lib1","SARS-CoV-2","CTAACTTAAATGATTA",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T K94M E141G V153M K198C",5
"lib1","SARS-CoV-2","CTAACTTATAACAATA",10,75.31,6,-4.76,1.96,1.5,1.18,0.02,">1 nonsynonymous","S139V G146V",2
"lib1","SARS-CoV-2","CTAACTTATGACAGTA",1,1.9,NA,NA,NA,NA,NA,NA,"stop","C102S T170*",2
"lib1","SARS-CoV-2","CTAACTTCCTTAGCAA",2,8.9,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","F99P A105L Y119T",3
"lib1","SARS-CoV-2","CTAACTTCTAATACGA",2,53.9,10.22,-0.55,0.09,2.54,1.03,0,">1 nonsynonymous","D98T I104L T140P",3
"lib1","SARS-CoV-2","CTAACTTGCCAGTACT",1,7.03,6.68,-4.09,1.1,1.5,1.1,0.04,">1 nonsynonymous","N40T V103N R127V",3
"lib1","SARS-CoV-2","CTAACTTTGTCTATAG",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L I80T N120G T148N C150V",5
"lib1","SARS-CoV-2","CTAAGAAAAAAAAACG",3,23.97,10.53,-0.24,0.12,2.78,1.17,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","CTAAGAAATAGCGAAA",2,62.43,8.73,-2.04,0.09,2.71,1.22,0,">1 nonsynonymous","N1E F126Q",2
"lib1","SARS-CoV-2","CTAAGAACACTATAGT",2,5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","CTAAGAACACTGCCGC",3,67.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4K S29M T63I S69A L95G R179G",6
"lib1","SARS-CoV-2","CTAAGAACTGAGACGC",6,125.83,10.6,-0.17,0.03,2.93,1.01,0,">1 nonsynonymous","K87T N151L",2
"lib1","SARS-CoV-2","CTAAGAAGCTACGCAT",6,15.11,8.91,-1.85,0.3,1.5,1,0.06,">1 nonsynonymous","C6W Y91K Y119R L183C",4
"lib1","SARS-CoV-2","CTAAGAAGTCAAAAAG",6,11.32,7.4,-3.37,0.37,1.87,1.1,0.05,">1 nonsynonymous","N4S F44S N107L L125V F126L Q168C",6
"lib1","SARS-CoV-2","CTAAGAAGTCAAAAGC",8,55.18,10.57,-0.19,0.07,2.93,1.01,0,">1 nonsynonymous","G152C S200V",2
"lib1","SARS-CoV-2","CTAAGAATAATTATAA",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P C61F G116P",3
"lib1","SARS-CoV-2","CTAAGAATACGAATCT",4,50.67,10.41,-0.35,0.05,2.94,1,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","CTAAGAATAGTCTGAA",18,218.37,10.72,-0.05,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGAATGAATCGTT",1,13.9,10.04,-0.72,0.16,2.16,1.09,0.02,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","CTAAGAATTGCTTTGA",6,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C61V N92R",3
"lib1","SARS-CoV-2","CTAAGACACACTTCTA",7,89.55,10.14,-0.62,0.07,2.65,1.06,0,">1 nonsynonymous","V20A D59Y",2
"lib1","SARS-CoV-2","CTAAGACACTTCTCCA",3,36.37,7.13,-3.63,0.31,1.76,1.21,0.02,">1 nonsynonymous","P7M N151R Y175D",3
"lib1","SARS-CoV-2","CTAAGACAGAGGGACA",2,40.75,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5H E10Y Y143G",3
"lib1","SARS-CoV-2","CTAAGACCAACTAAGC",6,121.05,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","D59L I88D",2
"lib1","SARS-CoV-2","CTAAGACCTTTCGAAC",5,97.6,9.83,-0.93,0.12,2.24,1.05,0,">1 nonsynonymous","P7V T55H Q84N",3
"lib1","SARS-CoV-2","CTAAGACTAACAGTAT",2,32.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41R V71G L95S V115K",4
"lib1","SARS-CoV-2","CTAAGACTAAGTCAAT",1,2.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","CTAAGACTCAAAGTAT",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S G101V Y175I",3
"lib1","SARS-CoV-2","CTAAGACTGATCAAAG",2,20.55,6.02,-4.75,1.18,1.5,1.1,0.03,">1 nonsynonymous","V52Y Y91D N120L P161R",4
"lib1","SARS-CoV-2","CTAAGACTGGTGAAAA",8,46.35,8.45,-2.31,0.32,1.5,1,0.04,">1 nonsynonymous","F47N G83Y D97G",3
"lib1","SARS-CoV-2","CTAAGACTGTAGAGTT",1,6.25,8.96,-1.8,0.4,1.5,1,0.04,">1 nonsynonymous","V103L K114L",2
"lib1","SARS-CoV-2","CTAAGACTTCAGTATT",4,40.71,8.53,-2.23,0.15,1.95,1.06,0.01,">1 nonsynonymous","T3C F134N G155H",3
"lib1","SARS-CoV-2","CTAAGACTTCTGACAC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q I80L Y121W P149L",4
"lib1","SARS-CoV-2","CTAAGAGAAGTAAGTT",2,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21W A42D Q84S S129I F160P F185R",6
"lib1","SARS-CoV-2","CTAAGAGAATGATCAC",1,3.36,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGAGACTTGAAAT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","G51D S184*",2
"lib1","SARS-CoV-2","CTAAGAGCTCTAGCAG",4,75.64,10.71,-0.06,0.04,2.89,1.06,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","CTAAGATAACAAGACG",9,147.77,10.46,-0.3,0.06,2.9,1.02,0,">1 nonsynonymous","G9A D97T A105T",3
"lib1","SARS-CoV-2","CTAAGATAAGAAATAT",12,229.46,8.84,-1.93,0.08,2.21,1.08,0,">1 nonsynonymous","S43G N107H V173M T201K",4
"lib1","SARS-CoV-2","CTAAGATAATATGTGT",2,5.14,7.39,-3.37,0.59,1.5,1,0.06,"1 nonsynonymous","I88Y",1
"lib1","SARS-CoV-2","CTAAGATACAAAACAG",6,71.25,10.35,-0.42,0.04,2.93,1,0,"1 nonsynonymous","F47T",1
"lib1","SARS-CoV-2","CTAAGATAGGCAGCGA",4,17.76,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K87R T100H I104D K114R N157S",5
"lib1","SARS-CoV-2","CTAAGATGTACTAATT",2,176.78,8.58,-2.19,0.1,2.73,1.06,0,"1 nonsynonymous","Y143N",1
"lib1","SARS-CoV-2","CTAAGATTAATTACAA",11,3.42,NA,NA,NA,NA,NA,NA,"stop","N58S S113* V153F",3
"lib1","SARS-CoV-2","CTAAGATTGTTAGGCT",3,0.85,NA,NA,NA,NA,NA,NA,"stop","L5F C49* V71L G83Y",4
"lib1","SARS-CoV-2","CTAAGCAAATAGTAAA",2,17.94,6,-4.76,1.97,3,1.19,0.01,">1 nonsynonymous","G51P I88C K132V",3
"lib1","SARS-CoV-2","CTAAGCAATCCCGAAT",1,90.9,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45L Y159L P169T",3
"lib1","SARS-CoV-2","CTAAGCACCAACAAGA",4,39.14,8.4,-2.36,0.13,2.19,1.07,0.01,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","CTAAGCACTTCCCACT",3,0,NA,NA,NA,NA,NA,NA,"stop","K87* D97A N171R",3
"lib1","SARS-CoV-2","CTAAGCAGACACAAAG",1,25.58,10.62,-0.15,0.32,2.51,1.5,0.03,"synonymous","",0
"lib1","SARS-CoV-2","CTAAGCAGAGCTAACC",5,43.96,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","S19L G117A",2
"lib1","SARS-CoV-2","CTAAGCAGGACAACAC",1,78.58,6.1,-4.67,0.74,1.5,1.18,0.02,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","CTAAGCAGGACTGAGA",6,57.77,9.28,-1.48,0.07,2.88,1.1,0,">1 nonsynonymous","N130R G166H",2
"lib1","SARS-CoV-2","CTAAGCAGGTGCGCTG",2,10.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y35L G86F D97A G101D N151K",5
"lib1","SARS-CoV-2","CTAAGCATTATATTAA",8,62.19,10.82,0.06,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGCCACATTTAGC",7,33.3,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","P177R",1
"lib1","SARS-CoV-2","CTAAGCCATGACAACC",3,39.84,10.39,-0.38,0.08,3,1.01,0,">1 nonsynonymous","A42G C61F S184C",3
"lib1","SARS-CoV-2","CTAAGCGAATTGTGGA",2,5.58,10.73,-0.03,0.1,2.94,1.01,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","CTAAGCGACTGTACCT",2,5.17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G9V Y50H T100I R179G",4
"lib1","SARS-CoV-2","CTAAGCGCAAGATAAA",2,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29P V37L D90W",3
"lib1","SARS-CoV-2","CTAAGCGCTCACTGTT",8,135.03,8.43,-2.34,0.13,2.84,1.02,0.01,">1 nonsynonymous","K87G T170L",2
"lib1","SARS-CoV-2","CTAAGCGCTCGATTGC",3,20,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14M G51T D137C S147V G152F",5
"lib1","SARS-CoV-2","CTAAGCGGTATATTGT",4,42.38,9.89,-0.87,0.07,2.87,1.05,0,">1 nonsynonymous","N120C G174Q",2
"lib1","SARS-CoV-2","CTAAGCGTAACTAAGT",4,17.59,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","N1L F12S Y66P T100N N120P I142L",6
"lib1","SARS-CoV-2","CTAAGCGTTTGGAAAG",1,21.66,10.75,-0.02,0.11,2.77,1.07,0.01,"1 nonsynonymous","R16Q",1
"lib1","SARS-CoV-2","CTAAGCTACATCCAGA",1,11.37,10.19,-0.57,0.1,2.99,1,0,">1 nonsynonymous","S53Y N64T F160L",3
"lib1","SARS-CoV-2","CTAAGCTATAAGTTGG",1,9.84,10.77,0.01,0.11,2.8,1.17,0.01,"1 nonsynonymous","Y39N",1
"lib1","SARS-CoV-2","CTAAGCTATGCTGGCT",5,89.52,10.14,-0.63,0.05,2.89,1.03,0,">1 nonsynonymous","N40S Y121I",2
"lib1","SARS-CoV-2","CTAAGCTGGCCAAGTA",2,82.49,10.74,-0.03,0.05,2.93,1.04,0,">1 nonsynonymous","N4G G152N",2
"lib1","SARS-CoV-2","CTAAGCTGTATACGCC",5,64.17,10.59,-0.17,0.08,2.87,1.07,0,">1 nonsynonymous","F8L K48S",2
"lib1","SARS-CoV-2","CTAAGGAAAACTCTTA",9,116.84,10.69,-0.08,0.05,2.92,1.01,0,"1 nonsynonymous","G152H",1
"lib1","SARS-CoV-2","CTAAGGAAATGTTGGA",1,51.92,10.79,0.03,0.06,2.91,1.04,0,"1 nonsynonymous","A18N",1
"lib1","SARS-CoV-2","CTAAGGAACAGATTAA",3,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T T55D I88F",3
"lib1","SARS-CoV-2","CTAAGGACATCCCTTA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","K87* N107H T140Y",3
"lib1","SARS-CoV-2","CTAAGGAGATACCAAT",7,31.73,6,-4.76,1.75,1.5,1.15,0.02,">1 nonsynonymous","S53M Y91L F99N",3
"lib1","SARS-CoV-2","CTAAGGAGTCAAACAG",1,28.02,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37Y Q79G R179N",3
"lib1","SARS-CoV-2","CTAAGGAGTTCGAGTC",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q D34K D90I",3
"lib1","SARS-CoV-2","CTAAGGATTAAATAGA",3,12.95,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","D34V N92S G146N",3
"lib1","SARS-CoV-2","CTAAGGATTAAGAGAT",4,90.46,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","R25L N40V N107S V153K Q176R E186S",6
"lib1","SARS-CoV-2","CTAAGGATTAGGCCGC",9,46.13,9.95,-0.81,0.15,2.02,1.05,0.01,">1 nonsynonymous","S43I R136G",2
"lib1","SARS-CoV-2","CTAAGGCAAGACTACT",1,3.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35I",1
"lib1","SARS-CoV-2","CTAAGGCACTAAAGGA",3,27.68,6,-4.76,2,3,1.27,0,">1 nonsynonymous","N30L D90M W106S Y121N L131A",5
"lib1","SARS-CoV-2","CTAAGGCAGAGTCAAA",2,1.21,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","CTAAGGCCGTAAACAT",7,130.77,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N24C V37S V71T T85L V115T Q168L P169S",7
"lib1","SARS-CoV-2","CTAAGGCCTTTGGGTA",2,6.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D T55C A190K",3
"lib1","SARS-CoV-2","CTAAGGGAATACTGAG",5,0.54,NA,NA,NA,NA,NA,NA,"stop","C49S P96L F185*",3
"lib1","SARS-CoV-2","CTAAGGGCTGATCCAA",1,22.28,9.97,-0.8,0.14,2.78,1.02,0.01,">1 nonsynonymous","Q84L E141C",2
"lib1","SARS-CoV-2","CTAAGGGCTGCCCTTT",1,15.89,10.42,-0.35,0.11,2.75,1.02,0.01,">1 nonsynonymous","N4I N24A",2
"lib1","SARS-CoV-2","CTAAGGTAAGTAAATA",3,18.9,7.07,-3.7,0.25,1.5,1.1,0.02,"1 nonsynonymous","D68Q",1
"lib1","SARS-CoV-2","CTAAGGTATAGGATAG",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R F167S",2
"lib1","SARS-CoV-2","CTAAGGTATATACGCG",2,39.26,9.82,-0.94,0.04,2.9,1.05,0,"1 nonsynonymous","P169D",1
"lib1","SARS-CoV-2","CTAAGGTCCCGACGAC",1,19.12,10.81,0.04,0.09,2.84,1.04,0,"1 nonsynonymous","N130H",1
"lib1","SARS-CoV-2","CTAAGGTGTGCGATAC",5,34.18,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G86F G146V C150L",3
"lib1","SARS-CoV-2","CTAAGGTTAAATGCGT",1,15.97,10.91,0.14,0.11,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGGTTTTTTATTT",3,14.88,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S36P C158M F167M",3
"lib1","SARS-CoV-2","CTAAGTAAAATACGAA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","L5* G51I C61E",3
"lib1","SARS-CoV-2","CTAAGTAACACTGGTA",4,43.06,8.45,-2.32,0.16,1.58,1.11,0.01,">1 nonsynonymous","D90F N107Q K128N",3
"lib1","SARS-CoV-2","CTAAGTAATAATATTT",1,22.96,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C49M Y119R G155E",3
"lib1","SARS-CoV-2","CTAAGTACAACCGCAG",5,5.89,NA,NA,NA,NA,NA,NA,"stop","E10* P96Y Y165C",3
"lib1","SARS-CoV-2","CTAAGTACCAACTCAC",6,101.21,9.77,-0.99,0.06,2.82,1.04,0,">1 nonsynonymous","N110D G116C",2
"lib1","SARS-CoV-2","CTAAGTAGATACAGTC",6,102.88,8.82,-1.94,0.08,2.76,1.15,0,">1 nonsynonymous","G83E E154F",2
"lib1","SARS-CoV-2","CTAAGTAGGGGACAAA",6,0.02,NA,NA,NA,NA,NA,NA,"stop","V103D D112*",2
"lib1","SARS-CoV-2","CTAAGTATACAAATTA",6,0.68,NA,NA,NA,NA,NA,NA,"stop","K94A K114P Q163T Q168*",4
"lib1","SARS-CoV-2","CTAAGTATAGCATAGA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib1","SARS-CoV-2","CTAAGTATTGATAATC",1,15.7,7.56,-3.2,0.29,1.5,1.23,0.03,">1 nonsynonymous","A89G T170G R179P",3
"lib1","SARS-CoV-2","CTAAGTATTTACGTGC",9,99.44,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y119Q F167I",2
"lib1","SARS-CoV-2","CTAAGTATTTGTGGAC",5,99.36,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","P82M S139W",2
"lib1","SARS-CoV-2","CTAAGTCAAAGTAACT",5,66.79,10.74,-0.03,0.06,2.95,1.03,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","CTAAGTCCATCACTAA",5,54.96,8.91,-1.85,0.17,1.78,1.18,0.01,">1 nonsynonymous","R78Y P96T G116T",3
"lib1","SARS-CoV-2","CTAAGTCCCCTTTCGT",4,73.01,10.78,0.02,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGTCCTTCCTATA",3,1.15,NA,NA,NA,NA,NA,NA,"stop","L57S K87* D97G",3
"lib1","SARS-CoV-2","CTAAGTCGTCGACTCT",5,50.92,8.76,-2,0.31,1.5,1.07,0.04,"1 nonsynonymous","F134P",1
"lib1","SARS-CoV-2","CTAAGTCTATAAGTAA",3,0.65,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib1","SARS-CoV-2","CTAAGTGAACACGAGT",1,80.06,10.61,-0.16,0.06,2.95,1.04,0,"1 nonsynonymous","V32E",1
"lib1","SARS-CoV-2","CTAAGTGAACATTCTT",9,35.28,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","T55N L183H",2
"lib1","SARS-CoV-2","CTAAGTGATAACTACC",6,43.96,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V37F G86A C102D I142L V180L",5
"lib1","SARS-CoV-2","CTAAGTGATTAACGAT",6,114.28,10.31,-0.45,0.04,2.89,1.06,0,">1 nonsynonymous","N1E P169H",2
"lib1","SARS-CoV-2","CTAAGTGCCCCCGATC",2,0.28,NA,NA,NA,NA,NA,NA,"stop","N30H L60* L95A T140P",4
"lib1","SARS-CoV-2","CTAAGTGCGAATAATT",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A P82L",2
"lib1","SARS-CoV-2","CTAAGTGGTATAACAA",2,7.45,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T55V D75Q L95Q F156C",4
"lib1","SARS-CoV-2","CTAAGTGTAAGCAGCC",1,53.23,6.05,-4.72,0.96,1.5,1.18,0.02,">1 nonsynonymous","V20E I80K Y121V P177T",4
"lib1","SARS-CoV-2","CTAAGTGTGGCCTATG",4,59.11,10.84,0.07,0.09,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAAGTGTGTTGTTAC",6,158.81,10.84,0.07,0.07,2.93,1.04,0,"1 nonsynonymous","V37F",1
"lib1","SARS-CoV-2","CTAAGTTAACATTGCT",3,12.1,9.74,-1.03,0.24,2.35,1.04,0.03,">1 nonsynonymous","C6F L60Q P149I",3
"lib1","SARS-CoV-2","CTAAGTTACAAGAATG",4,95.75,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36M V65C I104L N120Q L131I A145S F167E",7
"lib1","SARS-CoV-2","CTAAGTTACCTCAACA",4,42.52,9.57,-1.19,0.16,1.57,1.15,0.01,">1 nonsynonymous","A14V P133E S147V",3
"lib1","SARS-CoV-2","CTAAGTTCCAAAACCA",2,8.43,10.69,-0.07,0.19,2.91,1.04,0.01,">1 nonsynonymous","A105S T201R",2
"lib1","SARS-CoV-2","CTAAGTTTAACACCGG",2,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105D S200N",2
"lib1","SARS-CoV-2","CTAATAAAAACGATCT",4,51.86,6,-4.76,2,3,1.16,0,">1 nonsynonymous","S45L A67F P133T K198Y",4
"lib1","SARS-CoV-2","CTAATAAAAACGTACA",1,5.92,7.33,-3.44,0.47,1.5,1.36,0.05,">1 nonsynonymous","A67R V115W T140K",3
"lib1","SARS-CoV-2","CTAATAAAACATGAAC",4,24.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18L V77E Y121E",3
"lib1","SARS-CoV-2","CTAATAAAACTTGTAA",4,32.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F62T P96S K132V S139L G146M N151Q F160L",7
"lib1","SARS-CoV-2","CTAATAAAAGACAGGT",5,72.06,10.78,0.01,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATAAACATAATGC",8,152.2,10.56,-0.2,0.05,2.92,1.06,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","CTAATAAACCGTTGAA",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I R27F T140K",3
"lib1","SARS-CoV-2","CTAATAAACTAACCAC",3,11.71,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D90N F99V P177D",3
"lib1","SARS-CoV-2","CTAATAAAGTGCCCAA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","G9K V37E T55S R73* T100S Y159W S200V",7
"lib1","SARS-CoV-2","CTAATAAATAGACTCG",6,1.31,NA,NA,NA,NA,NA,NA,"stop","K94L T201*",2
"lib1","SARS-CoV-2","CTAATAACAGCAGTCG",2,12.25,9.47,-1.3,0.17,2.27,1.09,0.02,">1 nonsynonymous","S41V C61L Q79D N130G",4
"lib1","SARS-CoV-2","CTAATAACATGGGGAT",3,46.02,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","I2W G101L",2
"lib1","SARS-CoV-2","CTAATAACCCCAGACG",2,70.12,9.91,-0.85,0.07,2.7,1.01,0,">1 nonsynonymous","C6L T201R",2
"lib1","SARS-CoV-2","CTAATAACCTACTCTG",5,25.09,10.18,-0.58,0.09,2.74,1.01,0,">1 nonsynonymous","P54D F126L K199T",3
"lib1","SARS-CoV-2","CTAATAACCTAGCAAA",1,74.97,10.79,0.03,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATAACGGGACGCT",4,51.84,10.61,-0.15,0.05,2.96,1,0,">1 nonsynonymous","R27M G83M",2
"lib1","SARS-CoV-2","CTAATAACGTTTCACA",10,100.89,10.35,-0.41,0.05,2.93,1,0,">1 nonsynonymous","T3Q A14V P197H",3
"lib1","SARS-CoV-2","CTAATAACTACTGACA",4,56.64,10.69,-0.08,0.09,2.94,1.04,0,"1 nonsynonymous","N151A",1
"lib1","SARS-CoV-2","CTAATAAGAAAGAAAA",16,177.74,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V37G N118S C150V Y159T G166A",5
"lib1","SARS-CoV-2","CTAATAAGACTCTTTC",1,27.64,9.73,-1.04,0.16,2.4,1.04,0.01,">1 nonsynonymous","N4V S36L S43I S147C",4
"lib1","SARS-CoV-2","CTAATAAGCCAAGTAT",3,214.11,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12R D97T Y121G C158W",4
"lib1","SARS-CoV-2","CTAATAAGGACAATAC",10,74.23,8.52,-2.24,0.17,2.35,1.06,0.01,">1 nonsynonymous","C6K A67L T170G T201L",4
"lib1","SARS-CoV-2","CTAATAAGGTCAACTG",3,42.52,10.52,-0.25,0.04,2.93,1.04,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","CTAATAAGTAAAAGAG",3,48.99,10.66,-0.11,0.08,2.9,1.06,0,">1 nonsynonymous","S53K K128N P197D",3
"lib1","SARS-CoV-2","CTAATAAGTGTAACAA",2,56.63,9.5,-1.26,0.08,2.77,1.17,0,"1 nonsynonymous","A145F",1
"lib1","SARS-CoV-2","CTAATAAGTGTTGTAA",5,90.77,10.78,0.02,0.05,2.88,1.04,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","CTAATAATAATGCCCT",3,41.55,10.48,-0.28,0.03,2.92,1.03,0,">1 nonsynonymous","I2G G174K S200D",3
"lib1","SARS-CoV-2","CTAATAATATATTTTA",9,89.95,10.46,-0.31,0.05,2.9,1.02,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","CTAATAATATTATTAA",2,15.61,6.06,-4.7,1.96,1.5,1.33,0.07,">1 nonsynonymous","C49I N120Q I142D",3
"lib1","SARS-CoV-2","CTAATAATGAATAAGA",3,5.73,10.26,-0.51,0.09,2.98,1,0,">1 nonsynonymous","A14Q R136M",2
"lib1","SARS-CoV-2","CTAATAATTACATATG",1,13.6,10.4,-0.36,0.12,2.81,1.18,0.01,">1 nonsynonymous","I2A D90K",2
"lib1","SARS-CoV-2","CTAATAATTAGCAACA",4,99.95,10.32,-0.44,0.03,2.86,1.03,0,">1 nonsynonymous","S164I L187Q",2
"lib1","SARS-CoV-2","CTAATACAAAATAAGC",6,19.39,8.69,-2.07,0.2,1.5,1.13,0.02,">1 nonsynonymous","G9S C102Y",2
"lib1","SARS-CoV-2","CTAATACACACTAGAG",2,7.43,10.73,-0.03,0.27,2.81,1.03,0.02,">1 nonsynonymous","K56L A190R",2
"lib1","SARS-CoV-2","CTAATACCCGATAGTC",1,61.78,10.66,-0.11,0.04,2.89,1.07,0,">1 nonsynonymous","T85L N120A P197M",3
"lib1","SARS-CoV-2","CTAATACCCTGCTTTT",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E R73F K94S",3
"lib1","SARS-CoV-2","CTAATACCTCAACGCA",1,65.75,6.86,-3.9,0.13,2.22,1.12,0,"1 nonsynonymous","C158M",1
"lib1","SARS-CoV-2","CTAATACCTTCCCCAT",1,48.78,10.77,0,0.06,2.91,1.06,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","CTAATACGATCACTAA",5,0.78,NA,NA,NA,NA,NA,NA,"stop","D90F C150M N157*",3
"lib1","SARS-CoV-2","CTAATACGGGTGGAAA",6,57.03,8.6,-2.16,0.28,1.59,1.19,0.03,">1 nonsynonymous","G51R N107I",2
"lib1","SARS-CoV-2","CTAATACGTTTGCTAC",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E F17M D98T S113W E141V",5
"lib1","SARS-CoV-2","CTAATACTAAATCGCA",4,2.42,NA,NA,NA,NA,NA,NA,"stop","A33* E76R N107W",3
"lib1","SARS-CoV-2","CTAATACTATATCAAG",6,66.41,10.42,-0.34,0.16,2.71,1.12,0.01,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CTAATACTTCAATATT",9,199.22,10.75,-0.02,0.04,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATACTTTCGATTT",4,23.53,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","L95G",1
"lib1","SARS-CoV-2","CTAATAGAAAAGTTCT",3,58.37,10.67,-0.09,0.04,2.97,1,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","CTAATAGACAAATTTC",4,73.5,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","C61I G86A P177S",3
"lib1","SARS-CoV-2","CTAATAGCTCCTCGCA",2,1.05,NA,NA,NA,NA,NA,NA,"stop","E10Q Y39I L95* W106M",4
"lib1","SARS-CoV-2","CTAATAGGACTGTTAA",1,1.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","CTAATAGGACTTATAT",6,3.65,NA,NA,NA,NA,NA,NA,"stop","V20M Y175F T201*",3
"lib1","SARS-CoV-2","CTAATAGGAGGGAATG",3,6.9,7.68,-3.08,0.33,1.6,1.19,0.02,">1 nonsynonymous","F44Y S108Y K132A",3
"lib1","SARS-CoV-2","CTAATAGGCAGGTGTC",1,68.19,9.06,-1.71,0.12,2.47,1.12,0.01,">1 nonsynonymous","L57K K87Q H189T K198S",4
"lib1","SARS-CoV-2","CTAATAGTAACGATCA",3,28.31,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I28T V181G P197A",3
"lib1","SARS-CoV-2","CTAATAGTAATTATGA",6,24,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T63A N120R R179V",3
"lib1","SARS-CoV-2","CTAATAGTCAAGATTC",4,1.95,NA,NA,NA,NA,NA,NA,"stop","A33* G51R A105D S129I I142R",5
"lib1","SARS-CoV-2","CTAATATACATGGGGG",2,0.65,NA,NA,NA,NA,NA,NA,"stop","N120H F134* L162G",3
"lib1","SARS-CoV-2","CTAATATACGTTCCGA",1,37.41,10.03,-0.74,0.08,2.74,1.07,0,">1 nonsynonymous","G9V K56Q K87I G116W N130E",5
"lib1","SARS-CoV-2","CTAATATAGAAAAAGC",7,2.49,NA,NA,NA,NA,NA,NA,"stop","N4P Y93H N107F P177*",4
"lib1","SARS-CoV-2","CTAATATAGCAACAAA",1,10.67,8.74,-2.03,0.26,1.5,1.08,0.04,">1 nonsynonymous","S19K A33N K132R",3
"lib1","SARS-CoV-2","CTAATATATAAGATTT",1,17.25,10.64,-0.12,0.11,2.71,1.15,0.01,">1 nonsynonymous","E10S D97L",2
"lib1","SARS-CoV-2","CTAATATATGGCAAGA",3,17.35,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","CTAATATATGTGATTC",10,73.95,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D59T W106P",2
"lib1","SARS-CoV-2","CTAATATCACAACGAA",8,167.76,8.08,-2.69,0.11,1.5,1.11,0,">1 nonsynonymous","V32R R78L L131M G166W",4
"lib1","SARS-CoV-2","CTAATATCACACCAAC",2,5.07,NA,NA,NA,NA,NA,NA,"stop","V37* D59V",2
"lib1","SARS-CoV-2","CTAATATCCAACTCTA",4,130.98,9.36,-1.4,0.11,2.22,1.12,0.01,">1 nonsynonymous","E10N V32Q K128S E141C Q168S",5
"lib1","SARS-CoV-2","CTAATATCCCCGGTAC",4,54.07,8.93,-1.83,0.26,1.5,1.23,0.03,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","CTAATATGAACTTTCC",3,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100K L122I P177N",3
"lib1","SARS-CoV-2","CTAATATGAATGCTCG",5,1.35,NA,NA,NA,NA,NA,NA,"stop","K94* G146A",2
"lib1","SARS-CoV-2","CTAATATGAGATAGAA",3,17.65,6,-4.76,2,1.5,1.23,0.07,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","CTAATATGATAGTAAT",2,26.77,10.74,-0.02,0.1,2.8,1.15,0,">1 nonsynonymous","G152D T201A",2
"lib1","SARS-CoV-2","CTAATATGATATCCAG",1,17.27,10.41,-0.35,0.18,2.64,1,0.01,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","CTAATATGTGAGATGG",5,90.54,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25C V37T D98R G174S T201D",5
"lib1","SARS-CoV-2","CTAATATTAAATGAAG",13,389.98,6,-4.76,1.55,1.5,1.14,0,">1 nonsynonymous","N64P R73L V77T Q176L",4
"lib1","SARS-CoV-2","CTAATATTATGTAAAG",3,42.65,9.55,-1.21,0.11,2.67,1.07,0.01,">1 nonsynonymous","C6F G116S",2
"lib1","SARS-CoV-2","CTAATATTGAGAGGAA",6,26.89,9.81,-0.95,0.09,2.25,1.08,0,">1 nonsynonymous","C6V D98G",2
"lib1","SARS-CoV-2","CTAATATTGCCACTGA",6,5.05,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T15P V52G L95Y",3
"lib1","SARS-CoV-2","CTAATATTGCTTTTCT",7,92.15,10.73,-0.04,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATCAAAAAGTGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","V77W Y91* V153L G174L V182Y",5
"lib1","SARS-CoV-2","CTAATCAACATTACAA",1,6.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77K Y91H L122P A145L G172S",5
"lib1","SARS-CoV-2","CTAATCACAAAATCCA",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121T R127G",2
"lib1","SARS-CoV-2","CTAATCACTCAAAGAT",4,5.07,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","I2P Y21V S113R C158S P169K",5
"lib1","SARS-CoV-2","CTAATCACTCATAGAC",7,46.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23K I104K",2
"lib1","SARS-CoV-2","CTAATCACTTAATGAT",12,171.23,8.57,-2.19,0.11,2.65,1.04,0.01,">1 nonsynonymous","R73E S129G",2
"lib1","SARS-CoV-2","CTAATCAGAAATTCAA",11,188.12,10.77,0.01,0.06,2.91,1.03,0,">1 nonsynonymous","D97W L122G I138T",3
"lib1","SARS-CoV-2","CTAATCATAATATTAC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I A89S F99T",3
"lib1","SARS-CoV-2","CTAATCATAGATATAA",3,0.48,NA,NA,NA,NA,NA,NA,"stop","F12V S29L S43* I104N T140I",5
"lib1","SARS-CoV-2","CTAATCATTATAAACT",3,12.31,10.26,-0.51,0.13,2.51,1.16,0.01,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CTAATCATTGCCTAAT",1,31.72,10.64,-0.12,0.05,2.9,1.06,0,"1 nonsynonymous","K128G",1
"lib1","SARS-CoV-2","CTAATCATTGCCTCTA",1,16.73,10.85,0.08,0.08,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAATCCAAAAGACAG",9,54.69,6.88,-3.88,0.42,1.5,1.07,0.04,">1 nonsynonymous","L95C D98L A105L",3
"lib1","SARS-CoV-2","CTAATCCAACACGCTC",5,32.06,10.78,0.01,0.12,2.9,1.05,0.01,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","CTAATCCAACACTTGA",5,66.71,6,-4.76,2,3,1.16,0,">1 nonsynonymous","L57F R73M T85F Q176P",4
"lib1","SARS-CoV-2","CTAATCCAATCTCACG",7,232.29,10.63,-0.14,0.05,2.93,1,0,">1 nonsynonymous","A33V F62V A81R T201L",4
"lib1","SARS-CoV-2","CTAATCCACATGCAAG",1,0.83,NA,NA,NA,NA,NA,NA,"stop","G101* G166R Y178F",3
"lib1","SARS-CoV-2","CTAATCCCAGAGTATT",4,3.08,NA,NA,NA,NA,NA,NA,"stop","K48C G116R L125H P133* T148L F156I Q176L",7
"lib1","SARS-CoV-2","CTAATCCCGTAAGACC",5,86.48,6.73,-4.03,0.47,1.5,1.23,0.03,">1 nonsynonymous","R27I T46R G146M S184F",4
"lib1","SARS-CoV-2","CTAATCCCTAGTCTAT",1,8.8,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A14Y R27G",2
"lib1","SARS-CoV-2","CTAATCCCTATGTTAA",7,39.24,7.13,-3.64,0.45,1.5,1.05,0.05,">1 nonsynonymous","F99D Y165I",2
"lib1","SARS-CoV-2","CTAATCCCTGTCCTGT",3,163.88,9.29,-1.48,0.07,2.86,1.1,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","CTAATCCGGAGGCAAC",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F L131T E141G T201I",4
"lib1","SARS-CoV-2","CTAATCCGTAATCGCC",5,62.65,8.33,-2.43,0.23,1.65,1.15,0.02,">1 nonsynonymous","F12L D75G F126V G174V",4
"lib1","SARS-CoV-2","CTAATCCGTGAAAGAG",7,77.51,10.09,-0.68,0.08,2.64,1.03,0,">1 nonsynonymous","V77C F160H",2
"lib1","SARS-CoV-2","CTAATCCTGGAATCTT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","F8M Y35* S45W",3
"lib1","SARS-CoV-2","CTAATCCTGGCACCCG",2,30.18,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D90C C150F",2
"lib1","SARS-CoV-2","CTAATCCTTTCAAGAG",3,43.35,10.68,-0.09,0.09,2.86,1.04,0,">1 nonsynonymous","T55R V65C",2
"lib1","SARS-CoV-2","CTAATCCTTTCCCCAT",8,29.49,7.01,-3.75,0.33,2.09,1.11,0.03,">1 nonsynonymous","L5T R16M A33N R124N",4
"lib1","SARS-CoV-2","CTAATCGCATAGTCGA",3,41.95,10.02,-0.75,0.04,2.87,1,0,">1 nonsynonymous","N130Q Y143L",2
"lib1","SARS-CoV-2","CTAATCGGGACCGAGG",7,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C L131M R136V Q163S",4
"lib1","SARS-CoV-2","CTAATCGGTCACATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34S P54*",2
"lib1","SARS-CoV-2","CTAATCGTTTTAACCC",3,134.25,9.51,-1.26,0.2,1.73,1.09,0.02,">1 nonsynonymous","A14V F134K",2
"lib1","SARS-CoV-2","CTAATCTCCCAAATTA",15,116.25,6,-4.76,1.1,1.5,1.12,0.01,">1 nonsynonymous","Y39T D97E R127S C150E",4
"lib1","SARS-CoV-2","CTAATCTGATAACAAA",4,41.02,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C6V V37W K56M V77Q G101Y V115A G155S L162G",8
"lib1","SARS-CoV-2","CTAATCTGGCTAGTAA",1,132.02,10.79,0.03,0.05,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAATCTTATCCAAAC",3,64.48,9.15,-1.62,0.09,2.8,1.13,0,"1 nonsynonymous","Y119C",1
"lib1","SARS-CoV-2","CTAATGAAATACGAAC",4,32.12,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48V R127L Y159D",3
"lib1","SARS-CoV-2","CTAATGAAATGACGCG",2,0.56,NA,NA,NA,NA,NA,NA,"stop","K87N D112Y N151I T201*",4
"lib1","SARS-CoV-2","CTAATGAACTAAGACA",2,27.02,10.12,-0.64,0.11,2.73,1,0.01,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","CTAATGAATAACCATT",5,32.72,7.29,-3.47,0.35,1.5,1.06,0.05,">1 nonsynonymous","D90P Q168P",2
"lib1","SARS-CoV-2","CTAATGAATGATGATT",1,13.12,9.36,-1.41,0.11,2.76,1.09,0.01,">1 nonsynonymous","Y119V T140C",2
"lib1","SARS-CoV-2","CTAATGACACAGTTAA",1,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102R",1
"lib1","SARS-CoV-2","CTAATGACACGAAAAA",11,192.58,8.72,-2.04,0.08,2.35,1.11,0,">1 nonsynonymous","G9L N13E S29A F44Y T170G",5
"lib1","SARS-CoV-2","CTAATGACATACCAAA",4,38.17,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I2P S19L Y35F N64M K132T A190G",6
"lib1","SARS-CoV-2","CTAATGACCCATTGAA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","S41* S53C Y66V Y93L Y175F",5
"lib1","SARS-CoV-2","CTAATGACTTATAATG",2,24.07,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","E10S K56M D68R V153T",4
"lib1","SARS-CoV-2","CTAATGACTTGTCACC",11,170.54,10.77,0.01,0.08,2.84,1.1,0,">1 nonsynonymous","F160S S200Q",2
"lib1","SARS-CoV-2","CTAATGAGAAATACCA",5,57.1,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19R V37C R136A",3
"lib1","SARS-CoV-2","CTAATGAGACGAGAGC",5,6.68,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","T3A G9R D59R T85H K94Y V103W",6
"lib1","SARS-CoV-2","CTAATGAGGGGCTTCA",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G C150A",2
"lib1","SARS-CoV-2","CTAATGATAGACACAC",6,96.85,7.6,-3.17,0.16,1.57,1.13,0.01,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","CTAATGATCTAACTTA",3,45.11,8.78,-1.98,0.1,2.82,1.1,0,">1 nonsynonymous","A42S K48V L122R N171P",4
"lib1","SARS-CoV-2","CTAATGCAAATACACA",7,96.94,8.87,-1.89,0.07,2.72,1.17,0,">1 nonsynonymous","C6T L125P",2
"lib1","SARS-CoV-2","CTAATGCAAATACCTA",3,38.61,8.43,-2.33,0.15,2.01,1.11,0.01,"1 nonsynonymous","G74L",1
"lib1","SARS-CoV-2","CTAATGCAACGACTCA",3,60.24,10.56,-0.2,0.11,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATGCAATTTGAAC",5,57.61,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G101V D112G N118I S147L",4
"lib1","SARS-CoV-2","CTAATGCATAGACTGG",2,29.36,9,-1.76,0.14,1.63,1.17,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","CTAATGCATTGAAGAG",2,28.65,9.74,-1.02,0.1,2.56,1.15,0,">1 nonsynonymous","N58A Y121W N130P",3
"lib1","SARS-CoV-2","CTAATGCCGTAGAGTC",18,207,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P133R L162S",2
"lib1","SARS-CoV-2","CTAATGCGGCCCGGTT",4,12.24,9.42,-1.34,0.24,1.71,1.1,0.02,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","CTAATGCTAAGTCATA",3,99.19,7.81,-2.95,0.34,1.5,1,0.04,">1 nonsynonymous","E154I R179Q",2
"lib1","SARS-CoV-2","CTAATGGAACATAGTT",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R T55D C61K",3
"lib1","SARS-CoV-2","CTAATGGAAGCGAAAT",2,10.61,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","A89E G117R P149S",3
"lib1","SARS-CoV-2","CTAATGGTAAAACATA",8,15.82,6,-4.76,2,1.5,1.29,0.05,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","CTAATGGTCTCACCAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","V52* G86T",2
"lib1","SARS-CoV-2","CTAATGTAAGAATGTA",3,1.61,NA,NA,NA,NA,NA,NA,"stop","A105Y S200*",2
"lib1","SARS-CoV-2","CTAATGTAATTTGAAA",2,1.74,NA,NA,NA,NA,NA,NA,"stop","F44Q C61* P96E C102L Y175C",5
"lib1","SARS-CoV-2","CTAATGTACTAGGTTA",2,22.82,7.07,-3.7,0.32,1.5,1.18,0.02,">1 nonsynonymous","Y39K D98F P161T",3
"lib1","SARS-CoV-2","CTAATGTGAACATGGT",2,1.06,NA,NA,NA,NA,NA,NA,"stop","F62S I80* L131Q P197K",4
"lib1","SARS-CoV-2","CTAATGTGAATAGCCT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","Y35V V77* A89D A105T V153G P161L K198*",7
"lib1","SARS-CoV-2","CTAATGTTAAGACAGT",2,103.41,8.29,-2.48,0.15,1.52,1.18,0.01,">1 nonsynonymous","C6W Y178I",2
"lib1","SARS-CoV-2","CTAATGTTCAACATTG",5,36.44,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V103G Y123P T201Q",3
"lib1","SARS-CoV-2","CTAATGTTTTCAACCT",4,0.35,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","CTAATTAAAAATTGAC",1,32,8.38,-2.39,0.3,1.5,1.07,0.04,">1 nonsynonymous","I2G V37K R127I",3
"lib1","SARS-CoV-2","CTAATTAAAAGTTCCT",4,59.34,9.53,-1.24,0.07,2.79,1.1,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","CTAATTAAGCGGGACA",7,118.16,10.77,0,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATTAAGTAGGATG",1,64.11,10.81,0.05,0.05,2.91,1.05,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","CTAATTAATCTCCTCA",8,139.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A33V F47Y V103F",3
"lib1","SARS-CoV-2","CTAATTACAAACTTCA",1,5.34,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V32A S53R Y91I S113H R124W K132L",6
"lib1","SARS-CoV-2","CTAATTACAGTCCACA",2,51.87,10.56,-0.21,0.07,2.77,1.17,0,">1 nonsynonymous","A42L N64L",2
"lib1","SARS-CoV-2","CTAATTACCATCTGAT",5,52.09,10.77,0.01,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATTACCCAACAGT",1,14.16,10.68,-0.08,0.23,2.69,1.13,0.02,"wildtype","",0
"lib1","SARS-CoV-2","CTAATTAGACATAGGG",4,35.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14Y A67F G86Y K114R",4
"lib1","SARS-CoV-2","CTAATTAGCATCGCAG",2,11.3,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6H K26M C61K N107I",4
"lib1","SARS-CoV-2","CTAATTAGGTAAGAAA",1,27.43,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N24S V32W T46V I72Q G83R D90H D97C",7
"lib1","SARS-CoV-2","CTAATTATCTCTATAA",1,8.26,10.17,-0.59,0.13,2.7,1.15,0.01,">1 nonsynonymous","S36L Y121M",2
"lib1","SARS-CoV-2","CTAATTCAAAAAAATT",3,2.22,NA,NA,NA,NA,NA,NA,"stop","A14P D90* N110D R136I I142L",5
"lib1","SARS-CoV-2","CTAATTCAATGTATCA",3,48.8,8.63,-2.14,0.11,2.59,1.06,0.01,">1 nonsynonymous","K56L T100S Y119I",3
"lib1","SARS-CoV-2","CTAATTCAGATTCCAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","D98A T140* F156W",3
"lib1","SARS-CoV-2","CTAATTCATCACGAGT",6,17.6,6,-4.76,1.49,1.5,1.11,0.03,">1 nonsynonymous","A22T Y39V S45N G86R",4
"lib1","SARS-CoV-2","CTAATTCCCGTTGAAT",5,23.68,6.77,-3.99,0.24,1.5,1.11,0.01,">1 nonsynonymous","L5P A89E E141R N171V",4
"lib1","SARS-CoV-2","CTAATTCCGGGCCCAG",2,31.07,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33Q V103M L122M R127C",4
"lib1","SARS-CoV-2","CTAATTCCTGATGGTT",3,2.52,NA,NA,NA,NA,NA,NA,"stop","S53F L122* F156R T201I",4
"lib1","SARS-CoV-2","CTAATTCCTTAACTTA",2,88.4,10.46,-0.31,0.06,2.87,1,0,">1 nonsynonymous","T15R E141V",2
"lib1","SARS-CoV-2","CTAATTCGGACTTTTA",3,33.86,6.47,-4.3,0.42,1.5,1.22,0.01,">1 nonsynonymous","I2L F62S I80L K87V I142Q L162S G174D",7
"lib1","SARS-CoV-2","CTAATTCGTTTTAAGG",3,30,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38P P82R G86P",3
"lib1","SARS-CoV-2","CTAATTCTAGCTATTT",13,198.26,9.12,-1.65,0.1,2.49,1.1,0,">1 nonsynonymous","T15N K114W A145R",3
"lib1","SARS-CoV-2","CTAATTCTAGCTGTCG",4,54.86,6,-4.76,1.73,1.5,1.12,0.01,">1 nonsynonymous","T3S N107Q P133T P149L L162R",5
"lib1","SARS-CoV-2","CTAATTCTTACACCAA",1,21.02,10.62,-0.15,0.06,2.89,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAATTGAACTCCCCA",5,1.2,NA,NA,NA,NA,NA,NA,"stop","V37* L125I T140D P161G",4
"lib1","SARS-CoV-2","CTAATTGAAGCATAAA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","L5* Y50W V77Y K87I G101V",5
"lib1","SARS-CoV-2","CTAATTGAGAACTCCT",3,22.92,8.51,-2.25,0.27,1.51,1.11,0.03,">1 nonsynonymous","D97Y F167L",2
"lib1","SARS-CoV-2","CTAATTGAGTGTCTGG",13,42.57,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","S53F V103N",2
"lib1","SARS-CoV-2","CTAATTGATTGACCGT",5,51.74,10.8,0.04,0.1,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATTGCAAAAAAAA",4,31.2,10.08,-0.68,0.06,2.59,1.05,0,">1 nonsynonymous","L57C S129G",2
"lib1","SARS-CoV-2","CTAATTGCATCCATAT",1,57.76,10.52,-0.25,0.04,2.94,1.05,0,">1 nonsynonymous","C61V P191V",2
"lib1","SARS-CoV-2","CTAATTGCCTTTACCC",2,0.54,NA,NA,NA,NA,NA,NA,"stop","A67D D112F F156K K198*",4
"lib1","SARS-CoV-2","CTAATTGCTACGCCAG",2,11.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22C Y91H Y123S K128T Y143K",5
"lib1","SARS-CoV-2","CTAATTGTATAAAATA",1,41.11,10.61,-0.16,0.07,2.84,1.07,0,"1 nonsynonymous","D59N",1
"lib1","SARS-CoV-2","CTAATTGTCCAGTTAG",5,126.05,10.63,-0.13,0.04,2.91,1.03,0,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","CTAATTGTGAACTCCG",1,30.37,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y39R Y50C Q144L",3
"lib1","SARS-CoV-2","CTAATTTATGATCAAG",11,170.77,9.91,-0.85,0.07,2.45,1.03,0,">1 nonsynonymous","N1V C6L",2
"lib1","SARS-CoV-2","CTAATTTATTCTATGA",4,10.86,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","N30R S45A C49I I104H",4
"lib1","SARS-CoV-2","CTAATTTCAAGTGCTG",7,113.4,9.86,-0.9,0.1,2.71,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAATTTCAGGAGTTA",2,16,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N30R A42L S45Y V65I Y93H N157S",6
"lib1","SARS-CoV-2","CTAATTTCTAAACGCC",3,0,NA,NA,NA,NA,NA,NA,"stop","C6A P96* R124H",3
"lib1","SARS-CoV-2","CTAATTTGAAAAACAT",1,1.04,NA,NA,NA,NA,NA,NA,"stop","I88* T140N L188I",3
"lib1","SARS-CoV-2","CTAATTTGCCAATATG",8,99.63,9.77,-0.99,0.11,1.9,1.1,0,">1 nonsynonymous","K56Q P82A",2
"lib1","SARS-CoV-2","CTAATTTGTTTTGACA",1,8.54,9.36,-1.41,0.19,1.9,1,0.02,">1 nonsynonymous","L5K A33K C61P Y178I P197R",5
"lib1","SARS-CoV-2","CTAATTTTCGGTCAAG",3,517,10.74,-0.03,0.05,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAATTTTTATAAAAC",6,27.33,6,-4.76,2,3,1.32,0.02,">1 nonsynonymous","A67P D97C V103L",3
"lib1","SARS-CoV-2","CTACAAAAAAGTACAC",8,124.26,10.78,0.01,0.06,2.86,1.09,0,"1 nonsynonymous","N58P",1
"lib1","SARS-CoV-2","CTACAAAAACAGGGAG",5,113.73,10.7,-0.07,0.05,2.89,1.06,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","CTACAAAAATTTTCAA",6,72.11,6,-4.76,1.63,1.5,1.13,0.01,">1 nonsynonymous","C6K V32E P82L K87F I138L T148G",6
"lib1","SARS-CoV-2","CTACAAAACATAGCCA",3,23.34,6,-4.76,2,1.5,1.22,0.04,"1 nonsynonymous","K94T",1
"lib1","SARS-CoV-2","CTACAAAATACTGTAT",4,91.92,10.79,0.02,0.07,2.88,1.07,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","CTACAAACCAACGAAA",5,84.1,6.04,-4.72,1.01,1.5,1.2,0.02,">1 nonsynonymous","F47Y N110P Q144M G152I",4
"lib1","SARS-CoV-2","CTACAAACCAGAGAAA",7,31.08,10.93,0.17,0.09,2.88,1.09,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","CTACAAACTATTTATG",4,64.37,9.73,-1.04,0.04,2.91,1.04,0,">1 nonsynonymous","L125T E141N",2
"lib1","SARS-CoV-2","CTACAAAGAAAACGAG",8,149.02,10.57,-0.19,0.03,2.95,1,0,">1 nonsynonymous","S41C P54S V153A",3
"lib1","SARS-CoV-2","CTACAAAGCACATCAT",6,200.73,10.82,0.06,0.06,2.95,1.02,0,"1 nonsynonymous","I2H",1
"lib1","SARS-CoV-2","CTACAAATAATATCAT",4,30.94,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G9Y R16L F44I F70G G83V Q144V F167M",7
"lib1","SARS-CoV-2","CTACAAATATACAACT",1,12.9,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L60I P149M V181H",3
"lib1","SARS-CoV-2","CTACAAATCCACAGTT",4,13.88,6.22,-4.55,0.89,1.5,1.1,0.04,">1 nonsynonymous","P7H S69E A81V L122G",4
"lib1","SARS-CoV-2","CTACAAATCGTAGTCT",1,58.81,9.12,-1.64,0.11,2.48,1.15,0,"1 nonsynonymous","Q176R",1
"lib1","SARS-CoV-2","CTACAAATGGAACGGA",7,209.39,9.78,-0.99,0.1,2.01,1.04,0,">1 nonsynonymous","D90F E135S",2
"lib1","SARS-CoV-2","CTACAAATTATCGAGG",2,0.18,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib1","SARS-CoV-2","CTACAAATTGTTAAGA",1,7.23,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","T15E N64L L125G V181E",4
"lib1","SARS-CoV-2","CTACAAATTTTGAATA",3,10.56,9.92,-0.84,0.33,1.52,1.08,0.04,">1 nonsynonymous","S19R D90A L122K S129F",4
"lib1","SARS-CoV-2","CTACAACAAGTTAAAT",4,48.67,10.75,-0.02,0.1,2.88,1.08,0,">1 nonsynonymous","I2N V153I T201W",3
"lib1","SARS-CoV-2","CTACAACATATTTCGT",2,34.87,6.17,-4.59,1.25,1.5,1.19,0.03,">1 nonsynonymous","P7I A14W V52S",3
"lib1","SARS-CoV-2","CTACAACATCAGTCAA",7,45.65,9.96,-0.81,0.07,2.22,1.06,0,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","CTACAACATGTATTTA",4,150.78,10.32,-0.45,0.03,2.84,1.03,0,">1 nonsynonymous","A81T D97L",2
"lib1","SARS-CoV-2","CTACAACATTTAAAAC",3,9.04,6.19,-4.57,1.42,1.5,1.27,0.05,">1 nonsynonymous","L57K P133V E141I",3
"lib1","SARS-CoV-2","CTACAACCAGTCGCAA",3,5.91,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","S43I R73V R136F",3
"lib1","SARS-CoV-2","CTACAACCTAAACAAA",2,0.74,NA,NA,NA,NA,NA,NA,"stop","T46L P54L K87* Y119H P149K A190P",6
"lib1","SARS-CoV-2","CTACAACCTCAAACGC",3,1.13,NA,NA,NA,NA,NA,NA,"stop","G51T D90* P149T",3
"lib1","SARS-CoV-2","CTACAACCTCATTATG",10,61.46,8.54,-2.22,0.19,1.53,1.15,0.01,">1 nonsynonymous","N151F Y165N",2
"lib1","SARS-CoV-2","CTACAACGGCCAAAGC",4,87.52,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y39S D59F K94L C195I",4
"lib1","SARS-CoV-2","CTACAACGTACAACGC",1,27.88,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S19L Y91S",2
"lib1","SARS-CoV-2","CTACAACGTCAACACT",5,119.91,10.7,-0.07,0.05,2.92,1.03,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","CTACAACTGCAATTAC",6,66.61,10.79,0.03,0.08,2.9,1.04,0,">1 nonsynonymous","V32A L122G",2
"lib1","SARS-CoV-2","CTACAACTTTAATGAT",5,107.65,10.77,0,0.05,2.89,1.06,0,">1 nonsynonymous","S29T K198A",2
"lib1","SARS-CoV-2","CTACAAGAAATACTTG",3,4.84,NA,NA,NA,NA,NA,NA,"stop","D34A N64I V71H Q176*",4
"lib1","SARS-CoV-2","CTACAAGAAGAAGCTG",5,46.71,10.55,-0.21,0.07,2.71,1.12,0,">1 nonsynonymous","N4G S45D Y91N",3
"lib1","SARS-CoV-2","CTACAAGAATGAACAT",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K S36Y P96I G146S P149L T201K",6
"lib1","SARS-CoV-2","CTACAAGATTCAGTTT",1,10.64,6.34,-4.42,0.83,1.5,1.28,0.05,">1 nonsynonymous","A14F A33H S41K P133S",4
"lib1","SARS-CoV-2","CTACAAGGGGCTACCT",4,111.48,9.37,-1.39,0.09,1.91,1.09,0,">1 nonsynonymous","C61G D90H G152R",3
"lib1","SARS-CoV-2","CTACAAGGGTCCCACA",3,40.81,10.09,-0.67,0.07,2.22,1.02,0,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","CTACAAGTAAAATTTC",1,3.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","CTACAAGTAAGTACCG",11,120.1,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R127L Q144T G155R V181G",4
"lib1","SARS-CoV-2","CTACAATAAATGAAAG",3,10.34,6.66,-4.1,0.47,3,1.16,0.01,">1 nonsynonymous","C6R C49Q A145Y",3
"lib1","SARS-CoV-2","CTACAATAATGCACAA",2,32.18,10.6,-0.16,0.07,2.87,1.04,0,">1 nonsynonymous","N4K C61L D97E",3
"lib1","SARS-CoV-2","CTACAATACCTTGACA",1,16.94,9.79,-0.98,0.11,2.4,1,0.01,">1 nonsynonymous","I2V W23P S129G K198A",4
"lib1","SARS-CoV-2","CTACAATACGATACTT",5,153.87,10.68,-0.09,0.04,2.91,1.06,0,">1 nonsynonymous","I2K Q168R",2
"lib1","SARS-CoV-2","CTACAATACGCCATCG",4,55.45,10.8,0.04,0.09,2.87,1.12,0,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","CTACAATACTAACTAA",1,0.72,NA,NA,NA,NA,NA,NA,"stop","F8D S53R V103* N107P T201M",5
"lib1","SARS-CoV-2","CTACAATACTTAGAAT",10,107.23,10.76,-0.01,0.08,2.81,1.09,0,"1 nonsynonymous","N64A",1
"lib1","SARS-CoV-2","CTACAATAGAAAAGAT",3,22.94,10.23,-0.54,0.15,2.3,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTACAATATTTCTAGC",5,104.32,10.77,0.01,0.07,2.95,1.01,0,">1 nonsynonymous","V37C K56A",2
"lib1","SARS-CoV-2","CTACAATCCTACTCTA",2,0.82,NA,NA,NA,NA,NA,NA,"stop","L38H C158F Q176*",3
"lib1","SARS-CoV-2","CTACAATGAAATACAC",5,0.25,NA,NA,NA,NA,NA,NA,"stop","P54T T55N V115* P161L",4
"lib1","SARS-CoV-2","CTACAATGATCGCATG",3,70.17,10.41,-0.35,0.05,2.94,1.05,0,">1 nonsynonymous","V65I K87I",2
"lib1","SARS-CoV-2","CTACAATTATATCTCG",1,0.97,NA,NA,NA,NA,NA,NA,"stop","D68* P82L D97A V103G K114A P169N V181T",7
"lib1","SARS-CoV-2","CTACAATTGATGTTTG",8,23.68,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33D T85S S129R V181G",4
"lib1","SARS-CoV-2","CTACACAAAAAAAGGT",1,16.01,8.58,-2.18,0.19,2.64,1.07,0.02,">1 nonsynonymous","L5S N157L",2
"lib1","SARS-CoV-2","CTACACAAATCAATTG",2,68.56,10.16,-0.61,0.07,2.75,1.02,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","CTACACAACCCGTCTG",3,90.49,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","D90N G172M",2
"lib1","SARS-CoV-2","CTACACAAGACCCCCT",2,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68F E154W",2
"lib1","SARS-CoV-2","CTACACAAGGATAGCA",1,29.98,10.45,-0.31,0.09,2.84,1,0,">1 nonsynonymous","G9F K132N S139N",3
"lib1","SARS-CoV-2","CTACACACAGTCCCCT",3,1.63,NA,NA,NA,NA,NA,NA,"stop","C6A K199*",2
"lib1","SARS-CoV-2","CTACACAGCACCTATA",2,888.29,8.19,-2.57,0.18,1.5,1.05,0.01,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","CTACACATAATAACTT",5,75.13,8.99,-1.78,0.21,1.51,1.21,0.02,">1 nonsynonymous","E10M S45V K128V",3
"lib1","SARS-CoV-2","CTACACCATAATGTGA",2,10.29,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G86D G152V",2
"lib1","SARS-CoV-2","CTACACCCTACCATTA",1,19.86,9.89,-0.87,0.1,2.16,1.04,0,"1 nonsynonymous","L38C",1
"lib1","SARS-CoV-2","CTACACCGACTTTAAA",5,21.93,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N24F P82T Y165K K198G",4
"lib1","SARS-CoV-2","CTACACCGCTCCCCGT",4,29.32,9.39,-1.37,0.12,2.3,1.05,0.01,">1 nonsynonymous","G9L T15K V32D S41E C61H I142L V153G L183I",8
"lib1","SARS-CoV-2","CTACACCGTGCCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L T46V S113L",3
"lib1","SARS-CoV-2","CTACACCTGAACCAGC",2,0.54,NA,NA,NA,NA,NA,NA,"stop","A105V G116*",2
"lib1","SARS-CoV-2","CTACACCTGTTTCTCG",4,34.65,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","I2E E10I S108F S147T Y165T",5
"lib1","SARS-CoV-2","CTACACGCCAACGAAC",2,1.22,NA,NA,NA,NA,NA,NA,"stop","E10* T85A D90*",3
"lib1","SARS-CoV-2","CTACACGGGACAGATT",1,8.84,8.52,-2.25,0.19,2.45,1.15,0.02,">1 nonsynonymous","N109F T170Y",2
"lib1","SARS-CoV-2","CTACACTAGGACCACA",6,53.32,6.07,-4.69,1.33,1.5,1.37,0.04,">1 nonsynonymous","G86N L162M",2
"lib1","SARS-CoV-2","CTACACTCAAAACTCC",3,19.41,6.01,-4.76,1.28,1.5,1.19,0.03,">1 nonsynonymous","L5G Y66P",2
"lib1","SARS-CoV-2","CTACACTCGAAAGGTA",13,109.96,9.24,-1.52,0.09,1.88,1.13,0,">1 nonsynonymous","C6N A14L S129I",3
"lib1","SARS-CoV-2","CTACACTGAGACTGAG",1,64.61,6.39,-4.37,0.62,1.5,1.22,0.03,">1 nonsynonymous","Y50V V115N I138Q",3
"lib1","SARS-CoV-2","CTACACTGGAGAGTAC",2,31.58,6.44,-4.32,0.3,2.21,1.2,0.01,">1 nonsynonymous","G146S R179V T201E",3
"lib1","SARS-CoV-2","CTACACTTCCTGGAAT",1,27.84,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45D F99Q R124V K199N",4
"lib1","SARS-CoV-2","CTACACTTCTTAAATA",7,76.05,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","CTACACTTGATGGACC",4,36.98,6.45,-4.32,0.72,1.5,1.15,0.04,">1 nonsynonymous","N13C D90T N107V L122S I142S",5
"lib1","SARS-CoV-2","CTACACTTGTATCGCT",9,77.18,10.62,-0.14,0.05,2.89,1.09,0,">1 nonsynonymous","N4A R73K",2
"lib1","SARS-CoV-2","CTACAGAAACCGTTTG",1,5.52,10.94,0.18,0.38,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACAGAAAGGTATCG",2,63.74,9.31,-1.45,0.14,1.98,1.14,0.01,">1 nonsynonymous","F12W G146D T201V",3
"lib1","SARS-CoV-2","CTACAGAAATTTGGCT",2,24.82,8.97,-1.79,0.15,2.1,1.07,0.01,">1 nonsynonymous","E10D Y39L Y91L T100I Q176S",5
"lib1","SARS-CoV-2","CTACAGAACGTGCAGG",3,13.81,6,-4.76,0.78,3,1.07,0.01,">1 nonsynonymous","A18Q A42T F62K P82Q R136F F160S",6
"lib1","SARS-CoV-2","CTACAGAAGTCCCCCG",1,19.46,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","C31R C61A N107Y",3
"lib1","SARS-CoV-2","CTACAGAATAACCCAA",6,85.47,8.47,-2.29,0.27,1.5,1.15,0.03,">1 nonsynonymous","G51A N120D K128Y R136L",4
"lib1","SARS-CoV-2","CTACAGAATGAGGAGG",4,1.36,NA,NA,NA,NA,NA,NA,"stop","N4F K94*",2
"lib1","SARS-CoV-2","CTACAGAATTTACGAA",3,1.14,NA,NA,NA,NA,NA,NA,"stop","N40* Y50I V77R G166C",4
"lib1","SARS-CoV-2","CTACAGAGAATGAAAC",5,123.8,10.13,-0.64,0.05,2.81,1.01,0,">1 nonsynonymous","S29E D98N Q144L",3
"lib1","SARS-CoV-2","CTACAGAGACGGGCTA",2,14.81,10.38,-0.39,0.08,2.8,1,0,">1 nonsynonymous","I2P E135K",2
"lib1","SARS-CoV-2","CTACAGAGATACAAAT",3,26.7,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","I72N",1
"lib1","SARS-CoV-2","CTACAGAGGCTTAATA",1,33.64,10.62,-0.14,0.1,2.9,1.07,0,">1 nonsynonymous","C61R A192H",2
"lib1","SARS-CoV-2","CTACAGAGTGAAAATG",5,54.4,10.22,-0.54,0.04,2.82,1.06,0,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","CTACAGATACATCAAA",2,7.94,10.7,-0.06,0.14,3,1,0.01,"synonymous","",0
"lib1","SARS-CoV-2","CTACAGATTGACAGAA",5,0.28,NA,NA,NA,NA,NA,NA,"stop","E10G A33L R127* V173L",4
"lib1","SARS-CoV-2","CTACAGCAAACTGAGC",5,8.23,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K87S R127I Q163D L188F",4
"lib1","SARS-CoV-2","CTACAGCACTTCTCAT",8,150.2,9.88,-0.89,0.07,1.91,1.11,0,">1 nonsynonymous","T63F G155L S164K",3
"lib1","SARS-CoV-2","CTACAGCATTTAATAG",1,1914.27,10.02,-0.75,0.07,2.03,1.06,0,">1 nonsynonymous","T46L T100E S147T L162I G196L",5
"lib1","SARS-CoV-2","CTACAGCGACCAAAAA",3,9.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10T T15F L38T F70I G101N G166S",6
"lib1","SARS-CoV-2","CTACAGCGAGAACTAA",10,109.3,10.02,-0.74,0.11,1.93,1.05,0.01,">1 nonsynonymous","P96D Y123M",2
"lib1","SARS-CoV-2","CTACAGCGATGTCCAT",1,35.45,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K94H N107G C158R K198P",4
"lib1","SARS-CoV-2","CTACAGCGGGTAAAAA",2,1.53,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTACAGCTATTTCCCA",3,22.69,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L95Y T100S W106V",3
"lib1","SARS-CoV-2","CTACAGCTCCCGTTGT",3,34.49,10.12,-0.64,0.09,2.63,1,0,">1 nonsynonymous","T3A G83V K198R",3
"lib1","SARS-CoV-2","CTACAGCTTCCATATA",5,28.08,6,-4.76,1.51,1.5,1.13,0.01,">1 nonsynonymous","A105N P161C",2
"lib1","SARS-CoV-2","CTACAGCTTTTCTAAT",1,51.5,10.21,-0.56,0.06,2.81,1.03,0,">1 nonsynonymous","R136A S200L",2
"lib1","SARS-CoV-2","CTACAGGATTCGATAG",1,12.26,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D34T Y39H P54L R73F P96T",5
"lib1","SARS-CoV-2","CTACAGGCACTCTGAA",1,11,9.5,-1.27,0.24,1.5,1,0.04,">1 nonsynonymous","A18E G51F K132A K198P",4
"lib1","SARS-CoV-2","CTACAGGTACGTTCGC",1,19.15,10.92,0.16,0.11,2.91,1.03,0,">1 nonsynonymous","S43D A192L",2
"lib1","SARS-CoV-2","CTACAGGTCACGCTAA",6,110.78,10.73,-0.04,0.07,2.85,1.08,0,"1 nonsynonymous","S36M",1
"lib1","SARS-CoV-2","CTACAGTGCTATAAGC",1,14.57,6.12,-4.65,0.86,1.5,1.2,0.02,">1 nonsynonymous","F17S K128S S139P T201N",4
"lib1","SARS-CoV-2","CTACATAAAACGCATA",5,72.67,6.09,-4.67,0.79,1.5,1.18,0.02,">1 nonsynonymous","D34N C61T C158S",3
"lib1","SARS-CoV-2","CTACATAAACAAGATT",12,85.85,10.68,-0.09,0.07,2.94,1.04,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","CTACATAAACATGCAC",1,23.36,10.61,-0.15,0.06,2.82,1.15,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","CTACATAACGACCTGA",4,469.01,8.81,-1.96,0.1,1.96,1.12,0,">1 nonsynonymous","Y35V Q176K",2
"lib1","SARS-CoV-2","CTACATAATGAAAATC",11,106.77,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V77E G117P",2
"lib1","SARS-CoV-2","CTACATAATTACATTT",2,6.69,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V77R F99I",2
"lib1","SARS-CoV-2","CTACATACTTCGCACC",5,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A81E Y93I I104S Y123E F134S",6
"lib1","SARS-CoV-2","CTACATAGAAGTTTCG",7,34.48,7.41,-3.35,0.38,1.5,1.02,0.04,">1 nonsynonymous","L5I A22W C61I E76T Y123M Y143A",6
"lib1","SARS-CoV-2","CTACATAGACCACTGA",2,52.12,10.37,-0.4,0.05,2.95,1,0,"1 nonsynonymous","W106F",1
"lib1","SARS-CoV-2","CTACATAGAGTTTTAG",4,35.46,9.36,-1.4,0.19,1.77,1.15,0.01,">1 nonsynonymous","K94Y A190F",2
"lib1","SARS-CoV-2","CTACATAGATTACAAG",20,114.07,6.13,-4.64,0.85,1.5,1.21,0.02,">1 nonsynonymous","P133H F167I",2
"lib1","SARS-CoV-2","CTACATATAAATTTCT",4,8.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N13L L95E T201Q",3
"lib1","SARS-CoV-2","CTACATATACAAGCAG",5,29.03,10.79,0.02,0.06,2.91,1.02,0,"1 nonsynonymous","V153F",1
"lib1","SARS-CoV-2","CTACATATACAATCAA",3,81.36,10.64,-0.12,0.07,2.93,1.05,0,"1 nonsynonymous","F134H",1
"lib1","SARS-CoV-2","CTACATATTAAACTAA",3,1.05,NA,NA,NA,NA,NA,NA,"stop","T15S P96* F99K",3
"lib1","SARS-CoV-2","CTACATATTGACTACA",3,11.79,6.37,-4.39,0.76,1.5,1.16,0.04,">1 nonsynonymous","S45C G86F Y93M",3
"lib1","SARS-CoV-2","CTACATCAAAATAATA",1,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183Q",1
"lib1","SARS-CoV-2","CTACATCAAACAACAG",10,63.64,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F12C D112T S129N T201M",4
"lib1","SARS-CoV-2","CTACATCAAACTGGTA",3,76.99,10.84,0.08,0.08,2.87,1.08,0,">1 nonsynonymous","K128G V153L L188T",3
"lib1","SARS-CoV-2","CTACATCATGTGCCGC",3,93.34,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S29L I142G C158Y T170I",4
"lib1","SARS-CoV-2","CTACATCCCACAATAT",10,47.23,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T46P A89L F99A V181D P197L",5
"lib1","SARS-CoV-2","CTACATCCCTATATAG",1,40.26,10.13,-0.63,0.07,2.95,1.04,0,">1 nonsynonymous","T63R K87L I142V T148R",4
"lib1","SARS-CoV-2","CTACATCTAGAGCTTT",1,7.32,10.71,-0.06,0.05,3,1.03,0,"1 nonsynonymous","I138P",1
"lib1","SARS-CoV-2","CTACATGACTTTACTT",3,14.87,8.63,-2.13,0.21,2.78,1.26,0.01,">1 nonsynonymous","K56E I142G",2
"lib1","SARS-CoV-2","CTACATGATGGAATGG",6,2.63,NA,NA,NA,NA,NA,NA,"stop","C6Y N30* P54A R78Q Y121Q",5
"lib1","SARS-CoV-2","CTACATGATTGTGAAA",6,101.16,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","L38S S41T L131E",3
"lib1","SARS-CoV-2","CTACATGCATAAAACA",4,19.74,10.54,-0.23,0.14,2.83,1.08,0.02,">1 nonsynonymous","D90F Q168F",2
"lib1","SARS-CoV-2","CTACATGCCTCCCTTT",2,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V T46Q P54H A81I D97V P149R",6
"lib1","SARS-CoV-2","CTACATGCCTTCAGCA",12,123.78,8.51,-2.25,0.19,1.5,1.07,0.01,">1 nonsynonymous","I104K V173E S200D",3
"lib1","SARS-CoV-2","CTACATGGGACGCGAA",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A P54K F99Y",3
"lib1","SARS-CoV-2","CTACATGTAAAAAAAA",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I D112Y S139N",3
"lib1","SARS-CoV-2","CTACATGTTTAATGTG",1,24.39,10.8,0.04,0.07,2.86,1.11,0,"1 nonsynonymous","P191G",1
"lib1","SARS-CoV-2","CTACATTACATTAGAG",5,3.28,NA,NA,NA,NA,NA,NA,"stop","L5* S43A T170A",3
"lib1","SARS-CoV-2","CTACATTATTCCTTAA",7,28.56,6.04,-4.72,1.12,1.5,1.15,0.01,">1 nonsynonymous","I28R P54L A105L",3
"lib1","SARS-CoV-2","CTACATTCCACCATGA",4,33.16,8.66,-2.1,0.07,2.65,1.06,0,">1 nonsynonymous","P96T Y119P",2
"lib1","SARS-CoV-2","CTACATTCGTTATACG",1,0.28,NA,NA,NA,NA,NA,NA,"stop","L5F K48Q Y91L T100S E141* P149M",6
"lib1","SARS-CoV-2","CTACATTTAATTGGAA",8,164.06,6,-4.76,1.08,1.5,1.24,0.02,">1 nonsynonymous","E10I A81T Y178I",3
"lib1","SARS-CoV-2","CTACATTTATTGGTCC",1,5.38,10.21,-0.56,0.49,1.62,1.33,0.05,">1 nonsynonymous","G9T V37G Y93F",3
"lib1","SARS-CoV-2","CTACATTTCAATCCAT",16,222.03,10.88,0.11,0.07,2.91,1.04,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","CTACATTTTAAACGCA",4,25.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V180S K199N",2
"lib1","SARS-CoV-2","CTACCAAACATTTCAC",2,50.75,8.89,-1.87,0.07,2.7,1.08,0,">1 nonsynonymous","L5A P149S F167W",3
"lib1","SARS-CoV-2","CTACCAAACTGAACCC",1,25.96,10.84,0.07,0.08,2.93,1,0,">1 nonsynonymous","T100R N120S",2
"lib1","SARS-CoV-2","CTACCAAATAGGCTAA",11,138.52,6,-4.76,1.91,1.5,1.18,0.01,">1 nonsynonymous","A145I C150K T170L",3
"lib1","SARS-CoV-2","CTACCAAATTAACGAA",3,25.8,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","W23S C61S K94I F99P R127I R136K I142W P161I",8
"lib1","SARS-CoV-2","CTACCAACACTTTTAA",2,1.7,NA,NA,NA,NA,NA,NA,"stop","A14C N64*",2
"lib1","SARS-CoV-2","CTACCAACATTGTAGG",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G A14L F47Q Q144C",4
"lib1","SARS-CoV-2","CTACCAACGCGAGAAA",2,60.38,9.57,-1.19,0.18,1.91,1.14,0.01,">1 nonsynonymous","G9T Y121R T148K",3
"lib1","SARS-CoV-2","CTACCAACTATTGAGT",4,28.4,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T55C C61A G101D Y165W",4
"lib1","SARS-CoV-2","CTACCAACTCATCAAA",1,8.57,7.93,-2.83,0.18,2.89,1.06,0.01,">1 nonsynonymous","A33T S113R",2
"lib1","SARS-CoV-2","CTACCAAGACAAAGTT",4,62.9,10.8,0.03,0.05,2.96,1.01,0,"1 nonsynonymous","K199D",1
"lib1","SARS-CoV-2","CTACCAAGTAATCAAC",1,158.21,10.24,-0.52,0.03,2.79,1.01,0,">1 nonsynonymous","K48N G51S T55M I138L",4
"lib1","SARS-CoV-2","CTACCAATCATAGCAT",1,7.01,6,-4.76,2,3,1.03,0,">1 nonsynonymous","I88W N120M E186M",3
"lib1","SARS-CoV-2","CTACCAATTCCTTTTC",3,5.7,8.44,-2.32,0.48,1.5,1.02,0.08,">1 nonsynonymous","T15R N40L C49R D68I L125K G166L",6
"lib1","SARS-CoV-2","CTACCAATTTAAAAAT",5,103.35,10.04,-0.73,0.08,2.37,1.04,0,">1 nonsynonymous","T3S Y21V F62M V173Y",4
"lib1","SARS-CoV-2","CTACCACAAATGCTAT",2,46.42,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F12D V37S N92M F99N T201M",5
"lib1","SARS-CoV-2","CTACCACATATGGGAA",3,160.58,10.44,-0.33,0.06,2.78,1.07,0,"1 nonsynonymous","A105G",1
"lib1","SARS-CoV-2","CTACCACATCAATATG",4,64.62,10.78,0.02,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CTACCACCAAGATTTT",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109F L183R T201I",3
"lib1","SARS-CoV-2","CTACCACCAATATACC",2,12.55,9.08,-1.69,0.26,1.54,1.19,0.03,">1 nonsynonymous","F8D K26S I104M",3
"lib1","SARS-CoV-2","CTACCACCTAAAAGAC",7,67.14,10.65,-0.11,0.07,2.96,1.01,0,">1 nonsynonymous","T100L E141L",2
"lib1","SARS-CoV-2","CTACCACCTCAAAGTG",5,13.97,8.92,-1.84,0.29,1.58,1.18,0.04,">1 nonsynonymous","D75Q Q84R S139T G146Y",4
"lib1","SARS-CoV-2","CTACCACCTCCAGAGA",4,24.18,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V11P N64L D90G",3
"lib1","SARS-CoV-2","CTACCACGGTATAACT",2,19.82,8.4,-2.37,0.24,1.5,1.14,0.03,">1 nonsynonymous","G51W E186K",2
"lib1","SARS-CoV-2","CTACCACGTCACCAAT",3,73.57,10.7,-0.06,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACCACTTCGGTCAG",1,83.27,8.52,-2.25,0.22,1.5,1.07,0.02,">1 nonsynonymous","I28S R127S",2
"lib1","SARS-CoV-2","CTACCAGAGAGCCTTT",2,46.05,6,-4.76,0.97,1.5,1.2,0.02,">1 nonsynonymous","S43F R136T N157K",3
"lib1","SARS-CoV-2","CTACCAGAGTTCACAT",2,15.77,10.12,-0.65,0.15,2.36,1,0.01,">1 nonsynonymous","W106A S129N",2
"lib1","SARS-CoV-2","CTACCAGCCTATCTAA",5,45.68,7.14,-3.63,0.3,1.5,1.27,0.02,">1 nonsynonymous","V37W Y91V P96T",3
"lib1","SARS-CoV-2","CTACCAGCTGCACACT",1,4.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","CTACCAGTAAAGAAAT",4,0.42,NA,NA,NA,NA,NA,NA,"stop","D68Q G83* P133Y",3
"lib1","SARS-CoV-2","CTACCAGTAGCCTAAC",4,24.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54C A105W N151I",3
"lib1","SARS-CoV-2","CTACCAGTCCCTTAAA",5,64.08,10.63,-0.13,0.03,2.92,1.07,0,">1 nonsynonymous","F44Y N58S",2
"lib1","SARS-CoV-2","CTACCAGTTCGTATTT",7,84.64,9.98,-0.78,0.1,2.48,1,0,">1 nonsynonymous","A33R T55V",2
"lib1","SARS-CoV-2","CTACCAGTTCTAATAT",4,38.6,6,-4.76,2,3,1.24,0.01,"1 nonsynonymous","L162D",1
"lib1","SARS-CoV-2","CTACCATAGGAACAAC",5,152.16,10.73,-0.04,0.05,2.93,1.04,0,"1 nonsynonymous","L95I",1
"lib1","SARS-CoV-2","CTACCATCATAATAAA",8,80.48,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L57M V103L G146R T170V",4
"lib1","SARS-CoV-2","CTACCATGAATCTACA",1,24.57,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8C D90V E154F Y159Q",4
"lib1","SARS-CoV-2","CTACCATTACTAGACC",3,0.82,NA,NA,NA,NA,NA,NA,"stop","F12* P54I F70S",3
"lib1","SARS-CoV-2","CTACCATTCACATTGA",12,71.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D112Y S129P",2
"lib1","SARS-CoV-2","CTACCATTGTTGACGC",5,42.87,10.15,-0.61,0.11,2.18,1.07,0.01,">1 nonsynonymous","T3C D98L",2
"lib1","SARS-CoV-2","CTACCATTTTCAAAAC",5,66.17,10.1,-0.67,0.08,2.66,1.04,0,">1 nonsynonymous","E10K D90Y",2
"lib1","SARS-CoV-2","CTACCCAAAATACGCC",1,12.97,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N64S G172I",2
"lib1","SARS-CoV-2","CTACCCAAATCGTGAG",16,127.36,6.6,-4.17,0.4,1.5,1.12,0.02,">1 nonsynonymous","N24M Y35N I104D P149M",4
"lib1","SARS-CoV-2","CTACCCAACATAAATG",3,1.94,NA,NA,NA,NA,NA,NA,"stop","T3V Y50T L122* D137P Y143P",5
"lib1","SARS-CoV-2","CTACCCAATCTAAGTC",9,80.44,8.28,-2.49,0.3,1.5,1.15,0.03,">1 nonsynonymous","F8I K48I C61V N107A Q163E",5
"lib1","SARS-CoV-2","CTACCCAATTGAAAAA",7,82.05,10.18,-0.58,0.06,2.66,1,0,">1 nonsynonymous","R136L E141K",2
"lib1","SARS-CoV-2","CTACCCACATATGTTA",1,41.04,10.75,-0.02,0.1,2.87,1.05,0,">1 nonsynonymous","A18C P197K",2
"lib1","SARS-CoV-2","CTACCCACATGAAGAA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S Y178G",2
"lib1","SARS-CoV-2","CTACCCACCTCTGATA",7,116.71,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72S Q84K N120Y Q176S",4
"lib1","SARS-CoV-2","CTACCCACTCATGATG",5,31.63,10.74,-0.02,0.09,2.87,1.06,0.01,">1 nonsynonymous","T3V K56Q N120A",3
"lib1","SARS-CoV-2","CTACCCAGAAATATAA",1,6.19,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","G86R A105T",2
"lib1","SARS-CoV-2","CTACCCAGAGGCGACT",2,40.14,9.61,-1.16,0.05,2.79,1.12,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","CTACCCAGAGTGAACG",15,226.81,9.9,-0.87,0.09,2.01,1.04,0,">1 nonsynonymous","D90S Y123L A145G",3
"lib1","SARS-CoV-2","CTACCCAGATACATTA",6,138.75,10.24,-0.52,0.04,2.88,1.03,0,"1 nonsynonymous","V11F",1
"lib1","SARS-CoV-2","CTACCCAGTTAAGCAA",1,7.45,8.57,-2.19,0.27,2.88,1.13,0.01,">1 nonsynonymous","S41F F47V F156Q G174K T201N",5
"lib1","SARS-CoV-2","CTACCCATTATAAGAC",9,59.71,6.18,-4.58,0.54,1.5,1.2,0.01,">1 nonsynonymous","A14K C61M K94N F99L W106L D112T",6
"lib1","SARS-CoV-2","CTACCCCCAGATGATC",1,67,10.31,-0.46,0.04,2.86,1.02,0,">1 nonsynonymous","E135T N171M F185Y",3
"lib1","SARS-CoV-2","CTACCCCCGATAAACC",18,197.98,10.64,-0.13,0.03,2.94,1.04,0,">1 nonsynonymous","Y66T D97S L122V A192E",4
"lib1","SARS-CoV-2","CTACCCCCTAGACGCA",3,35.11,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A22T S36P L60D K87T Y119A K132T G152P",7
"lib1","SARS-CoV-2","CTACCCGAACTAGCAT",9,117.86,8.85,-1.91,0.07,2.75,1.14,0,">1 nonsynonymous","L5R R78M G117M",3
"lib1","SARS-CoV-2","CTACCCGCGGGCGTCC",1,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L Y66L V182G",3
"lib1","SARS-CoV-2","CTACCCGGCGACCAAC",3,111.18,10.2,-0.56,0.07,2.68,1.03,0,">1 nonsynonymous","N120L F134S T201M",3
"lib1","SARS-CoV-2","CTACCCTAATAACAAA",14,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D A42N L131S R179M",4
"lib1","SARS-CoV-2","CTACCCTGTTAGCTCA",1,10.05,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","C6Y S41T S45R V71A I142A N157T",6
"lib1","SARS-CoV-2","CTACCCTTTGGTACGT",2,22.08,10.84,0.08,0.05,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACCGAAACTACCCC",2,5.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120F V181R K198L",3
"lib1","SARS-CoV-2","CTACCGAACCCATTCT",10,65.1,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N107R K128C D137V",3
"lib1","SARS-CoV-2","CTACCGAACTGGAATT",5,29.54,10.8,0.03,0.05,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACCGAACTGTCCAG",11,114.29,9.43,-1.34,0.11,2.4,1.08,0,">1 nonsynonymous","N13S I142T G155S",3
"lib1","SARS-CoV-2","CTACCGACAACCGGCA",5,59.84,10.15,-0.62,0.04,2.95,1.01,0,"1 nonsynonymous","G174E",1
"lib1","SARS-CoV-2","CTACCGACATAGGGGA",1,71.87,8.27,-2.49,0.11,2.57,1.06,0,">1 nonsynonymous","L122W Y175A",2
"lib1","SARS-CoV-2","CTACCGATAACTTAGA",1,29.29,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F47P S69Y A89E F99V D112H G146I",6
"lib1","SARS-CoV-2","CTACCGATCAAAAAAA",2,2.93,NA,NA,NA,NA,NA,NA,"stop","C49Y K56*",2
"lib1","SARS-CoV-2","CTACCGCATTCTTGAC",1,27.12,9.52,-1.24,0.28,1.53,1.04,0.04,"1 nonsynonymous","L183T",1
"lib1","SARS-CoV-2","CTACCGGAACGTAGGG",14,399.74,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F126C F134S Y165N P177R T201G",5
"lib1","SARS-CoV-2","CTACCGGCACCTATTT",2,0.6,NA,NA,NA,NA,NA,NA,"stop","C6K S36M C61* T170M R179L",5
"lib1","SARS-CoV-2","CTACCGGCAGGGTAAT",3,28.78,6,-4.76,2,3,1.18,0,">1 nonsynonymous","W23S C102V N118L",3
"lib1","SARS-CoV-2","CTACCGGTGAAGTATT",4,62.98,10.62,-0.15,0.05,2.91,1.05,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","CTACCGGTTAATCACT",2,56.47,9.99,-0.77,0.09,2.42,1.02,0,">1 nonsynonymous","G9R V32W T85F Y91L L131V P197S",6
"lib1","SARS-CoV-2","CTACCGGTTAGCCATC",2,11.35,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K48D F99R E141T",3
"lib1","SARS-CoV-2","CTACCGTAACCAATAT",3,29.05,6.78,-3.99,0.45,1.5,1.04,0.04,">1 nonsynonymous","P82K V103I S113M S129Y Y175V",5
"lib1","SARS-CoV-2","CTACCGTATCTATATA",2,166.29,6.2,-4.56,0.96,1.5,1.26,0.03,"1 nonsynonymous","Y93W",1
"lib1","SARS-CoV-2","CTACCGTTAAAATAAA",3,19.49,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S41L V77D N109L T140L G166S Q176T",6
"lib1","SARS-CoV-2","CTACCTAAACCGTGTT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","N1V A14N C31R P54L C61K Q79M C102* V115K Y165T",9
"lib1","SARS-CoV-2","CTACCTAAGACACCAA",3,7.64,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F70S Y123V",2
"lib1","SARS-CoV-2","CTACCTAGAGAAATGG",8,107.01,10.63,-0.14,0.09,2.76,1.1,0,">1 nonsynonymous","K26S Q168H",2
"lib1","SARS-CoV-2","CTACCTAGTCTATAAG",1,2.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","CTACCTATAATTCGAG",7,144.39,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S53P L125S C150L",3
"lib1","SARS-CoV-2","CTACCTATGCAACTAA",18,184.64,6.08,-4.69,0.84,1.5,1.2,0.02,">1 nonsynonymous","K56D T63V A89E",3
"lib1","SARS-CoV-2","CTACCTATGGCACAAC",1,56.26,10.84,0.08,0.07,2.89,1.06,0,">1 nonsynonymous","I28M L60I",2
"lib1","SARS-CoV-2","CTACCTCAGCAATGGA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","N1L F62N Y91* Q144I S147A",5
"lib1","SARS-CoV-2","CTACCTCGTACTACGA",4,6.46,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","K48R T63S N118H P149L L183E",5
"lib1","SARS-CoV-2","CTACCTCTCCAATAAT",6,501.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K48T V103E Y119G T140S Y165G",5
"lib1","SARS-CoV-2","CTACCTGTACACTCGA",3,50.52,8.66,-2.11,0.14,1.84,1.18,0.01,">1 nonsynonymous","I88T N130I F156L",3
"lib1","SARS-CoV-2","CTACCTGTATCTCGGA",2,52.37,10.67,-0.09,0.05,2.88,1.07,0,">1 nonsynonymous","N110T E154A",2
"lib1","SARS-CoV-2","CTACCTTATTCAGTAG",6,92.23,7.19,-3.58,0.15,1.89,1.14,0.01,">1 nonsynonymous","N120M Y143G",2
"lib1","SARS-CoV-2","CTACCTTCATACTGTG",11,13.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3R N92L V103D S139L",4
"lib1","SARS-CoV-2","CTACCTTGAGTTATAT",1,23.25,6.02,-4.75,1.24,1.5,1.26,0.03,">1 nonsynonymous","G9C R25V G101D R124G",4
"lib1","SARS-CoV-2","CTACCTTTTACACGGA",5,29.39,7.45,-3.32,0.32,1.5,1.22,0.04,">1 nonsynonymous","N13R S113V A192Q",3
"lib1","SARS-CoV-2","CTACCTTTTGAACGTT",2,29.35,10.71,-0.05,0.07,2.89,1.03,0,">1 nonsynonymous","T3V T100H",2
"lib1","SARS-CoV-2","CTACCTTTTTTTCACG",2,24.72,9.79,-0.97,0.09,2.36,1.06,0,">1 nonsynonymous","V11C P149A L188H",3
"lib1","SARS-CoV-2","CTACGAAACAGGAACG",1,57.1,10.7,-0.07,0.03,2.96,1.01,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","CTACGAAAGAAAATGC",1,40.54,8.16,-2.61,0.27,1.5,1,0.03,">1 nonsynonymous","G9M A89C N118F",3
"lib1","SARS-CoV-2","CTACGAACTGTGGTCA",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S T170W R179A",3
"lib1","SARS-CoV-2","CTACGAAGCTGAGGCG",4,66.12,10.62,-0.15,0.06,2.89,1.06,0,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","CTACGAATTAGACAAC",1,4.05,NA,NA,NA,NA,NA,NA,"stop","S41A D59C K87* Q144A H189Q K199V",6
"lib1","SARS-CoV-2","CTACGACAAAATAGAC",12,238.52,10.09,-0.67,0.07,2.65,1.02,0,">1 nonsynonymous","Y21S K48R K198P",3
"lib1","SARS-CoV-2","CTACGACATTAATACG",1,6.45,7.18,-3.59,0.38,1.85,1.07,0.04,">1 nonsynonymous","L5M S29A W106M N157H",4
"lib1","SARS-CoV-2","CTACGACATTTATCGG",1,67.84,10.7,-0.06,0.06,2.87,1.1,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","CTACGACGGGTGATAT",5,52.37,10.67,-0.1,0.05,2.89,1.05,0,">1 nonsynonymous","L188H G196W",2
"lib1","SARS-CoV-2","CTACGAGATGTTAGGT",6,44.52,6.26,-4.5,0.75,1.5,1.09,0.04,">1 nonsynonymous","N4S A14Y G51S A81P N92S N120I Y165D",7
"lib1","SARS-CoV-2","CTACGAGCAATATTAG",1,102.33,10.68,-0.08,0.05,2.89,1.07,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","CTACGAGCGCACTTTT",4,30.72,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","D97F D112W Y119P P149T",4
"lib1","SARS-CoV-2","CTACGATAAAAATCGT",9,22.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S69N I80W P96S Q168T",4
"lib1","SARS-CoV-2","CTACGATAATCATCTT",7,475.9,9.33,-1.43,0.05,2.85,1.07,0,">1 nonsynonymous","C61W T170H",2
"lib1","SARS-CoV-2","CTACGCAACATCTCCT",1,19.66,10.76,0,0.08,2.92,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CTACGCAACGAACAGT",1,7.28,10.08,-0.68,0.27,2.31,1,0.02,">1 nonsynonymous","Y21S A42D N151L",3
"lib1","SARS-CoV-2","CTACGCAATCAGTGCT",3,1.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","CTACGCACCTATGGTC",5,53.42,10.79,0.02,0.05,2.87,1.07,0,">1 nonsynonymous","K48N T201M",2
"lib1","SARS-CoV-2","CTACGCACTCGAGCGG",4,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N D97V W106T K114R S139G T148W",6
"lib1","SARS-CoV-2","CTACGCAGTCCACAAA",12,3.73,NA,NA,NA,NA,NA,NA,"stop","L38* E141S",2
"lib1","SARS-CoV-2","CTACGCGAAGCAAAGG",1,8.99,10.78,0.01,0.21,2.72,1.07,0.01,">1 nonsynonymous","T55F N64Y E141K",3
"lib1","SARS-CoV-2","CTACGCGAGAAGTAGG",5,28.8,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L95G S147D",2
"lib1","SARS-CoV-2","CTACGCGATTCTCCGT",2,0.18,NA,NA,NA,NA,NA,NA,"stop","D90R P133A T148Q F167*",4
"lib1","SARS-CoV-2","CTACGCGCAACTAAAA",5,109.78,10.73,-0.03,0.06,2.87,1.1,0,"1 nonsynonymous","K132Q",1
"lib1","SARS-CoV-2","CTACGCGCGGCAGACA",2,44.61,8.02,-2.74,0.31,1.5,1.1,0.03,">1 nonsynonymous","F12I D68S",2
"lib1","SARS-CoV-2","CTACGCGTTGTTGGCC",5,149.65,10.67,-0.1,0.04,2.92,1.05,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","CTACGCTAAGCATGAT",4,24.35,9.96,-0.81,0.14,2.04,1.05,0.01,"1 nonsynonymous","F12C",1
"lib1","SARS-CoV-2","CTACGCTAATAAATAT",7,11.51,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","I2L A89R F99T",3
"lib1","SARS-CoV-2","CTACGCTCAGCAGGAC",3,50.16,10.62,-0.14,0.06,2.93,1.04,0,">1 nonsynonymous","S147A E186Y",2
"lib1","SARS-CoV-2","CTACGCTCCAAAAATT",1,13.88,10.81,0.05,0.08,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CTACGCTCCACTGTCC",2,13.89,10.61,-0.15,0.11,2.89,1.09,0.01,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","CTACGCTGCATACTGA",1,34.67,10.82,0.05,0.07,2.93,1.01,0,"1 nonsynonymous","G196T",1
"lib1","SARS-CoV-2","CTACGCTTACCGAATT",1,27.33,10.65,-0.11,0.07,2.88,1,0,"1 nonsynonymous","D34N",1
"lib1","SARS-CoV-2","CTACGGAAAAGTAGTT",15,144.54,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y50K N92A Y121K S129E R179G",5
"lib1","SARS-CoV-2","CTACGGAAGGGTTAGT",11,103.08,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N58L K94F F160T T170A L187R",5
"lib1","SARS-CoV-2","CTACGGACATATTCAG",5,39.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84P K132D",2
"lib1","SARS-CoV-2","CTACGGACCGGCCTAT",4,14.79,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","S69R G86S",2
"lib1","SARS-CoV-2","CTACGGACTTACAGAC",6,43.82,6.22,-4.55,0.61,1.5,1.2,0.02,">1 nonsynonymous","S36R G86K I104P",3
"lib1","SARS-CoV-2","CTACGGACTTTCAGGC",4,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L R136F",2
"lib1","SARS-CoV-2","CTACGGATGAAAGCTA",2,41.31,10.74,-0.03,0.08,2.87,1.05,0,">1 nonsynonymous","F62A N130R S139A",3
"lib1","SARS-CoV-2","CTACGGCCCGCAAGGC",2,0.12,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTACGGGTATCCAACT",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L I104E P177R",3
"lib1","SARS-CoV-2","CTACGGTACCATATTG",3,22.16,10.76,-0.01,0.09,2.97,1,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","CTACGGTTAAATTTAT",3,10,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","P82G D97G Y165I Q176K",4
"lib1","SARS-CoV-2","CTACGGTTAAGGAGCT",2,6.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T L95S Y178A",3
"lib1","SARS-CoV-2","CTACGGTTTTAACATT",8,129.29,10.72,-0.05,0.03,2.94,1.03,0,"1 nonsynonymous","C195R",1
"lib1","SARS-CoV-2","CTACGTACAAACATCC",3,32.44,10.23,-0.53,0.12,2.57,1.01,0.01,">1 nonsynonymous","W23Y K114F E154K",3
"lib1","SARS-CoV-2","CTACGTACTACATAGG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A Q84K E135N",3
"lib1","SARS-CoV-2","CTACGTATGTACAGGC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","S45N V65P N120L Q144* V180K",5
"lib1","SARS-CoV-2","CTACGTCAATCATTCA",4,8.42,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","E10R A81T L122A Y165M",4
"lib1","SARS-CoV-2","CTACGTCAGGTTAATT",3,14.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V F99V D137L C150V C158T F167C Q176M",7
"lib1","SARS-CoV-2","CTACGTCTCCGGCCAT",5,0.16,NA,NA,NA,NA,NA,NA,"stop","I88* Y159E",2
"lib1","SARS-CoV-2","CTACGTGTGAACGCAG",2,16.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14M N24L N40H L60K D90H T140E P161G",7
"lib1","SARS-CoV-2","CTACGTGTGTAAATTG",1,16.52,6,-4.76,1.63,3,1.11,0,">1 nonsynonymous","A89D N107P",2
"lib1","SARS-CoV-2","CTACGTTGCTAACCAA",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52F A105D L125R",3
"lib1","SARS-CoV-2","CTACGTTGGGGTAACC",2,24.34,10.29,-0.47,0.08,2.84,1,0,">1 nonsynonymous","T46A S164Y",2
"lib1","SARS-CoV-2","CTACTAAAAAAGCTGT",4,68.97,10.11,-0.65,0.06,2.78,1.03,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","CTACTAAAAACTAAGC",9,92.18,10.78,0.01,0.07,2.85,1.07,0,">1 nonsynonymous","N4S G9N",2
"lib1","SARS-CoV-2","CTACTAAAACCGAACC",8,71.39,10.28,-0.48,0.05,2.86,1,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","CTACTAAAAGGACAAA",3,73.32,6.02,-4.75,0.94,1.5,1.15,0.02,">1 nonsynonymous","G86S F167D Y178L A192T",4
"lib1","SARS-CoV-2","CTACTAAAATCTTGTG",12,135.94,10.82,0.06,0.07,2.93,1.03,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","CTACTAAAGATTAGAC",3,11.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41R C61L F99P F156L",4
"lib1","SARS-CoV-2","CTACTAAATTTATTGA",3,48.9,10.8,0.04,0.06,2.92,1.04,0,">1 nonsynonymous","L5G T201K",2
"lib1","SARS-CoV-2","CTACTAACTACTTAAT",3,23.15,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y66S Y91S N110M D137F",4
"lib1","SARS-CoV-2","CTACTAACTAGTAAAA",2,43,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64R Y123P Y143D N151Y",4
"lib1","SARS-CoV-2","CTACTAAGAAAATGTG",2,18.37,6,-4.76,1.6,1.5,1.09,0.01,">1 nonsynonymous","P82A K114R I138Q G166V",4
"lib1","SARS-CoV-2","CTACTAAGTGATCTAT",6,0.19,NA,NA,NA,NA,NA,NA,"stop","S19* I28T T63N S108F F134P S164Q",6
"lib1","SARS-CoV-2","CTACTAATATCAGCCG",3,2.18,NA,NA,NA,NA,NA,NA,"stop","S41M V65T I80F I88D N109W N130V N151*",7
"lib1","SARS-CoV-2","CTACTAATATTCCGTT",5,46.35,6,-4.76,2,3,1.16,0,">1 nonsynonymous","T55L G101L T148S T170R",4
"lib1","SARS-CoV-2","CTACTACCAAGACATA",6,13.66,6,-4.76,1.82,1.5,1.19,0.06,">1 nonsynonymous","T15A A42S C49Y L60W T100D",5
"lib1","SARS-CoV-2","CTACTACCTTCGTCCG",5,14.7,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","T63L G101L",2
"lib1","SARS-CoV-2","CTACTACGAAGTGAAT",7,56.63,6.19,-4.58,0.93,1.5,1.23,0.03,">1 nonsynonymous","R16K F44D C49T R179Y",4
"lib1","SARS-CoV-2","CTACTACGTCGCCCCA",7,123.29,10.69,-0.07,0.04,2.89,1.07,0,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","CTACTAGAATATTGCA",5,28.72,6,-4.76,2,1.5,1.38,0.08,">1 nonsynonymous","W106A E141L G166V L183A",4
"lib1","SARS-CoV-2","CTACTAGAATTTCAGC",2,41.09,6.4,-4.37,0.45,1.5,1.16,0.02,">1 nonsynonymous","F12V A42F F47W S69T N151I N157D",6
"lib1","SARS-CoV-2","CTACTAGACGATCACT",8,186.99,10.34,-0.42,0.03,2.88,1.04,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","CTACTAGCGGGCAATT",1,19.3,9.73,-1.03,0.17,1.82,1.05,0.01,">1 nonsynonymous","F12A D97T",2
"lib1","SARS-CoV-2","CTACTAGCTTCCCTGA",9,89.36,6,-4.76,1.29,1.5,1.19,0.02,">1 nonsynonymous","Y39R K94Q F126K V180K",4
"lib1","SARS-CoV-2","CTACTAGTCCTCTGCG",2,70.47,10.52,-0.24,0.04,2.9,1.05,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CTACTATATTAAGCTA",3,67.49,10.37,-0.4,0.08,2.81,1.07,0,">1 nonsynonymous","I2F A42C D59R T201M",4
"lib1","SARS-CoV-2","CTACTATTACTTCGGC",6,158.15,8.66,-2.1,0.09,2.37,1.11,0,">1 nonsynonymous","D98H Q176S",2
"lib1","SARS-CoV-2","CTACTATTCCGCGAGC",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90K Y123S L183R",3
"lib1","SARS-CoV-2","CTACTATTGTGCATGA",4,21.39,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F12L K94P R179G",3
"lib1","SARS-CoV-2","CTACTCAACCAAACAA",1,4.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","CTACTCACGACTTGCA",9,99.78,10.87,0.1,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACTCATAACATAAT",5,36.06,6.4,-4.36,0.67,1.5,1.11,0.04,">1 nonsynonymous","F44C K56Y N118A G146F Y165G T201Q",6
"lib1","SARS-CoV-2","CTACTCATATTCCAAG",4,41.48,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L95A Q144M",2
"lib1","SARS-CoV-2","CTACTCATTGAATTTT",6,66.68,6.09,-4.67,0.56,1.5,1.12,0.01,">1 nonsynonymous","D97H N107R R124C V182I",4
"lib1","SARS-CoV-2","CTACTCCCCTGAAAAA",1,6.51,NA,NA,NA,NA,NA,NA,"stop","N13C D90S S113T R124A Y165*",5
"lib1","SARS-CoV-2","CTACTCCCGTTCGGAG",5,57.91,8.01,-2.76,0.32,1.5,1.14,0.04,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","CTACTCCGTAAAACAG",2,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E K94V L125H",3
"lib1","SARS-CoV-2","CTACTCCTGACCAGGA",4,48.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12R L95E I142T Y175C",4
"lib1","SARS-CoV-2","CTACTCGAATCACGAG",2,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I N171K",2
"lib1","SARS-CoV-2","CTACTCGAGTACTTCC",1,15.61,10.6,-0.17,0.08,2.9,1.09,0,">1 nonsynonymous","T3D S41R G83N N171W",4
"lib1","SARS-CoV-2","CTACTCGCTAAATTAT",1,9.74,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","S29I L57R N92M",3
"lib1","SARS-CoV-2","CTACTCGCTGTTCCAC",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I G117M",2
"lib1","SARS-CoV-2","CTACTCGGCCAAGGGA",2,56.25,10.64,-0.12,0.05,2.89,1.03,0,"1 nonsynonymous","A42L",1
"lib1","SARS-CoV-2","CTACTCTACTAATTCA",4,43.52,10.31,-0.46,0.07,2.9,1.04,0,">1 nonsynonymous","I88V S139N",2
"lib1","SARS-CoV-2","CTACTCTCATTTATGA",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H V52L F62N G86W Y121L E135G",6
"lib1","SARS-CoV-2","CTACTCTCGAGAAGAC",6,3.14,NA,NA,NA,NA,NA,NA,"stop","W23L S36* G146* G152S T201K",5
"lib1","SARS-CoV-2","CTACTCTCTCAGTAAA",4,41.98,6,-4.76,2,3,1.2,0,">1 nonsynonymous","F62S A89S W106G",3
"lib1","SARS-CoV-2","CTACTCTCTCCATCTA",5,49.54,6.31,-4.46,0.86,1.5,1.3,0.04,">1 nonsynonymous","N4P I88S",2
"lib1","SARS-CoV-2","CTACTCTTACGAATTT",1,10.41,9.48,-1.28,0.37,1.98,1.03,0.03,">1 nonsynonymous","N58T K87Q K94C T100V N130M",5
"lib1","SARS-CoV-2","CTACTCTTAGGTCAAG",1,35.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64F Q163V",2
"lib1","SARS-CoV-2","CTACTCTTGAACAATC",2,71.15,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S29T V71L N92A D137R G155K",5
"lib1","SARS-CoV-2","CTACTCTTTTAACACA",1,7.51,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6V Y35S T46H G51Q Y119D",5
"lib1","SARS-CoV-2","CTACTGAAAAGATACA",3,33.67,10.24,-0.53,0.13,2.77,1.05,0.01,">1 nonsynonymous","L60A P96S",2
"lib1","SARS-CoV-2","CTACTGAATACATAAG",4,76.4,10.75,-0.01,0.08,2.89,1.06,0,"1 nonsynonymous","L5N",1
"lib1","SARS-CoV-2","CTACTGAATTGGGATT",2,26.02,10.19,-0.57,0.09,2.56,1.01,0,"1 nonsynonymous","A67S",1
"lib1","SARS-CoV-2","CTACTGACCAAACCCG",5,15.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F44M G86Q",2
"lib1","SARS-CoV-2","CTACTGAGAAACTGGA",2,72.38,10.29,-0.48,0.05,2.94,1,0,">1 nonsynonymous","N30W A42S C61S",3
"lib1","SARS-CoV-2","CTACTGAGGGCGATAA",2,84.24,9.75,-1.01,0.04,2.85,1.03,0,">1 nonsynonymous","G74S V153E",2
"lib1","SARS-CoV-2","CTACTGCAACATCAGA",5,109.61,10.81,0.05,0.05,2.94,1.03,0,">1 nonsynonymous","I138M S200I",2
"lib1","SARS-CoV-2","CTACTGCATAAACATA",1,73.32,10,-0.76,0.43,1.5,1,0.05,">1 nonsynonymous","G86P N92L",2
"lib1","SARS-CoV-2","CTACTGCCCAGAGCTT",7,76.39,6.05,-4.72,0.91,1.5,1.18,0.01,">1 nonsynonymous","F8H D59V K132R P149C",4
"lib1","SARS-CoV-2","CTACTGCGAAACTGCA",4,2.52,NA,NA,NA,NA,NA,NA,"stop","N130G Y175*",2
"lib1","SARS-CoV-2","CTACTGCTTAAAATAC",2,21.29,10.14,-0.63,0.09,2.79,1.11,0,">1 nonsynonymous","D97V G152C",2
"lib1","SARS-CoV-2","CTACTGGAACGAGGGG",1,2.35,NA,NA,NA,NA,NA,NA,"stop","S19* A33L T63D W106T K198G",5
"lib1","SARS-CoV-2","CTACTGGTGAAGCAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A33I F167T",3
"lib1","SARS-CoV-2","CTACTGTAACCCACAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","E10I F17D S129*",3
"lib1","SARS-CoV-2","CTACTGTAAGTACAAA",8,83.56,9.83,-0.93,0.07,2.85,1.05,0,">1 nonsynonymous","Y119F N151K",2
"lib1","SARS-CoV-2","CTACTGTGCCAAATAT",5,113.53,10.54,-0.23,0.06,2.93,1.03,0,">1 nonsynonymous","G9S N13G Y39R",3
"lib1","SARS-CoV-2","CTACTGTGCTGTGACT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","S113* V153E",2
"lib1","SARS-CoV-2","CTACTGTGTTAAATGC",4,12.71,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W106G Y123L S139L C158S T201A",5
"lib1","SARS-CoV-2","CTACTGTTACGCCCGC",12,108.59,10.54,-0.23,0.06,2.87,1.02,0,"1 nonsynonymous","E10R",1
"lib1","SARS-CoV-2","CTACTTAAATTAGAGC",8,51.02,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8L D34A N107F",3
"lib1","SARS-CoV-2","CTACTTAACGGAATCG",2,45.16,10.07,-0.69,0.14,2.11,1.04,0.01,">1 nonsynonymous","V37S C102F",2
"lib1","SARS-CoV-2","CTACTTACAGACGGCC",1,41.25,10.84,0.07,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACTTACATCTATTT",13,137.56,8.85,-1.92,0.12,1.84,1.15,0.01,">1 nonsynonymous","V77M Y121S",2
"lib1","SARS-CoV-2","CTACTTACGTCAGGTC",2,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q D34T G51R C61Y A105N G116A",6
"lib1","SARS-CoV-2","CTACTTAGCATACGTA",3,96.16,10.84,0.07,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACTTATCCAATCTA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A D112N",2
"lib1","SARS-CoV-2","CTACTTATTTAATATG",8,63.97,10.13,-0.64,0.08,2.63,1.04,0,">1 nonsynonymous","V32M P133H",2
"lib1","SARS-CoV-2","CTACTTCAACCAACAT",1,34.32,10.89,0.13,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTACTTCAACGCGTTT",3,32.05,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","A81T N118L A145L",3
"lib1","SARS-CoV-2","CTACTTCATCAAACTA",5,39.27,9.49,-1.27,0.07,2.77,1.07,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","CTACTTCATCAGCACA",6,52.13,6.19,-4.57,0.54,1.5,1.1,0.01,">1 nonsynonymous","W106Y R127T C195H",3
"lib1","SARS-CoV-2","CTACTTCATCCAGGAA",8,67.94,10.57,-0.19,0.03,2.93,1.02,0,">1 nonsynonymous","I28L E135H",2
"lib1","SARS-CoV-2","CTACTTCCAAATTGAT",11,117.4,6.1,-4.66,0.61,1.5,1.15,0.01,">1 nonsynonymous","F8Q N107S E154D",3
"lib1","SARS-CoV-2","CTACTTCGAATAAGAA",1,6.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14G T85F I104C P161M",4
"lib1","SARS-CoV-2","CTACTTCTCCGTACTA",3,46.15,8.48,-2.28,0.18,1.83,1.11,0.01,">1 nonsynonymous","N40H Q84E I142R G152L T201H",5
"lib1","SARS-CoV-2","CTACTTCTTCCACGAG",3,256.78,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R25L I142S S164F",3
"lib1","SARS-CoV-2","CTACTTGAAACAATGC",2,39.18,8.38,-2.39,0.2,2.3,1.11,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","CTACTTGCATGACTCC",3,105.99,10.36,-0.4,0.06,2.77,1.06,0,">1 nonsynonymous","F17M T201S",2
"lib1","SARS-CoV-2","CTACTTGCCGTCCTTA",9,72.01,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Q79V G86T N107S V173T",4
"lib1","SARS-CoV-2","CTACTTGGCGACAGAA",2,6.97,10.61,-0.16,0.2,2.55,1.27,0.02,">1 nonsynonymous","N120H V153D",2
"lib1","SARS-CoV-2","CTACTTGTGACGGGCG",9,39.32,7.22,-3.54,0.48,1.5,1.13,0.07,">1 nonsynonymous","N13I I88W",2
"lib1","SARS-CoV-2","CTACTTGTGACTGAAA",1,8.8,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","F70L N107V F156T",3
"lib1","SARS-CoV-2","CTACTTGTGTTCTGGG",1,44.99,7.13,-3.64,0.54,1.5,1.08,0.08,">1 nonsynonymous","K48R T55N F62R D68T R73A F167S",6
"lib1","SARS-CoV-2","CTACTTTAATCAAAGC",4,114.86,10.54,-0.22,0.04,2.95,1,0,">1 nonsynonymous","A14R V153S",2
"lib1","SARS-CoV-2","CTACTTTACCAGTGAA",1,6.93,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","L60T C158T",2
"lib1","SARS-CoV-2","CTACTTTATTAGTGCA",2,25.73,8.43,-2.34,0.27,1.67,1.19,0.02,">1 nonsynonymous","F8C F134S",2
"lib1","SARS-CoV-2","CTACTTTGAACTGCAG",5,33.43,10.63,-0.14,0.05,2.99,1,0,">1 nonsynonymous","I28M P54G L60W",3
"lib1","SARS-CoV-2","CTACTTTTAATTACTA",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A Q176F",2
"lib1","SARS-CoV-2","CTAGAAAAACTACAGA",1,52.8,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V37Y W106V Y119L C158F F167Q T201N",6
"lib1","SARS-CoV-2","CTAGAAAAAGTAAATA",1,57.03,8.33,-2.44,0.15,2.59,1.08,0.01,">1 nonsynonymous","I2S T85S N157D G174V",4
"lib1","SARS-CoV-2","CTAGAAAAATAGAGAA",2,15.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K94R T100N V180Q S184K",4
"lib1","SARS-CoV-2","CTAGAAAAATGACCGC",1,26.68,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S19K S41R I88G K94N A105L Y123K R124S Y143F",8
"lib1","SARS-CoV-2","CTAGAAAACCCAATAT",1,18.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G51V N107L",2
"lib1","SARS-CoV-2","CTAGAAAACTCCAACT",1,10.57,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","N92Q V115M N118C S139F",4
"lib1","SARS-CoV-2","CTAGAAAAGCACGGCG",7,96.2,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A18S I28K Y35G C61E I88K G146M A192Q",7
"lib1","SARS-CoV-2","CTAGAAAATGTACGCG",5,135.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N4D Y66S F99H Y178A",4
"lib1","SARS-CoV-2","CTAGAAACATAAACAA",5,1.89,NA,NA,NA,NA,NA,NA,"stop","A33* A42P F99I F156E",4
"lib1","SARS-CoV-2","CTAGAAACGAAACTCG",6,149.56,10.8,0.04,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGAAACGCATCCCC",4,119.85,9.99,-0.78,0.06,2.9,1.01,0,">1 nonsynonymous","K56M G146T",2
"lib1","SARS-CoV-2","CTAGAAACGTTAAATT",5,0,NA,NA,NA,NA,NA,NA,"stop","I2S F70E D90E Y93H E141*",5
"lib1","SARS-CoV-2","CTAGAAACTATACCCG",2,6.47,6.69,-4.07,2,1.5,1.15,0.02,">1 nonsynonymous","C6M G86L F134P",3
"lib1","SARS-CoV-2","CTAGAAAGAACAATAT",1,24.92,8.75,-2.01,0.25,1.5,1.14,0.03,">1 nonsynonymous","T3L R127M",2
"lib1","SARS-CoV-2","CTAGAAAGAACAGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V V181A",2
"lib1","SARS-CoV-2","CTAGAAAGCTCTACGT",3,19.04,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V37Y V103S",2
"lib1","SARS-CoV-2","CTAGAAAGGCATATGA",15,45.35,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34S F47V S53L D68M C150R",5
"lib1","SARS-CoV-2","CTAGAAATAATGACAT",3,140.99,8.38,-2.39,0.18,1.85,1.14,0.01,">1 nonsynonymous","C6D G117V K128P",3
"lib1","SARS-CoV-2","CTAGAAATAATGTCAC",1,24.79,10.04,-0.73,0.14,1.81,1.07,0.01,">1 nonsynonymous","S53K K94V D97S",3
"lib1","SARS-CoV-2","CTAGAAATACCCACCA",1,1.11,NA,NA,NA,NA,NA,NA,"stop","R27S Y35T C150F C158*",4
"lib1","SARS-CoV-2","CTAGAAATAGAATCTA",3,24.55,9.72,-1.04,0.07,2.88,1.07,0,">1 nonsynonymous","T85R F160V T170K",3
"lib1","SARS-CoV-2","CTAGAAATATGAATCG",9,80.8,10.79,0.02,0.07,2.92,1.04,0,">1 nonsynonymous","N4T V37I K56G",3
"lib1","SARS-CoV-2","CTAGAAATGAATATAA",4,21.12,10.56,-0.2,0.09,2.85,1.1,0,"1 nonsynonymous","T3W",1
"lib1","SARS-CoV-2","CTAGAAATGGAATATA",1,1.46,NA,NA,NA,NA,NA,NA,"stop","C6* A14P T100I E135L S147R P161F",6
"lib1","SARS-CoV-2","CTAGAAATTACAGAAC",9,65.27,9.8,-0.97,0.12,1.95,1.02,0.01,">1 nonsynonymous","N13C Y35T K56A",3
"lib1","SARS-CoV-2","CTAGAAATTACCACAT",4,0.29,NA,NA,NA,NA,NA,NA,"stop","E10L P82* A190V",3
"lib1","SARS-CoV-2","CTAGAACAAATAGAAG",7,27.5,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F8R R27L F44M D75A R124E",5
"lib1","SARS-CoV-2","CTAGAACATCTAAAAG",3,70.28,8.84,-1.93,0.28,1.5,1,0.03,">1 nonsynonymous","I28R A42Q C61V T85L",4
"lib1","SARS-CoV-2","CTAGAACCAACCCGAA",6,52,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S43T V71D",2
"lib1","SARS-CoV-2","CTAGAACCATCGAGAG",4,110.24,10.16,-0.61,0.08,2.64,1.05,0,"1 nonsynonymous","S69R",1
"lib1","SARS-CoV-2","CTAGAACCTATTACGG",8,0.52,NA,NA,NA,NA,NA,NA,"stop","L38* Y119S",2
"lib1","SARS-CoV-2","CTAGAACGTACGACAT",3,55.73,10.59,-0.17,0.07,2.89,1.06,0,">1 nonsynonymous","K56N Y66N",2
"lib1","SARS-CoV-2","CTAGAACGTGGAACTA",2,39.45,9.96,-0.8,0.1,2.16,1.03,0.01,">1 nonsynonymous","G51A G83L",2
"lib1","SARS-CoV-2","CTAGAACTCAAAAACG",2,23.49,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23S V182C",2
"lib1","SARS-CoV-2","CTAGAACTCCGAGCAT",3,9.47,6.52,-4.25,0.64,1.5,1.1,0.03,">1 nonsynonymous","N4F N130D P161T P169L",4
"lib1","SARS-CoV-2","CTAGAACTGCCGAAAG",4,147.75,10.7,-0.06,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAGAACTGTAGTCAG",5,52.96,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N24I Q84W K128C S139Y",4
"lib1","SARS-CoV-2","CTAGAAGCTGCAAAAC",3,13.09,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A89Y P96Q V115R A145T Y165M",5
"lib1","SARS-CoV-2","CTAGAAGGATGCTAAT",3,10.27,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D68Q G101I L122E E141L",4
"lib1","SARS-CoV-2","CTAGAATACGTCAAAG",7,87.46,10.01,-0.76,0.07,2.47,1.01,0,"1 nonsynonymous","P96E",1
"lib1","SARS-CoV-2","CTAGAATAGAAGTTTA",7,22,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T15P S45V C49Y A89D E135S G174D",6
"lib1","SARS-CoV-2","CTAGAATAGGCTGCCA",6,57.92,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4Y C49N",2
"lib1","SARS-CoV-2","CTAGAATAGTCACACG",10,106.86,10.41,-0.35,0.04,2.84,1.02,0,">1 nonsynonymous","T3P Y35S K48R",3
"lib1","SARS-CoV-2","CTAGAATATGTATCCC",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F D75L I138V Y159R F167R",5
"lib1","SARS-CoV-2","CTAGAATATTATTTTT",15,41,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45I P96G F99Y",3
"lib1","SARS-CoV-2","CTAGAATCTAAAGGGT",12,119.7,10.73,-0.03,0.07,2.88,1.09,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","CTAGAATGCGTAATTT",6,5.02,NA,NA,NA,NA,NA,NA,"stop","I88A V115D P149*",3
"lib1","SARS-CoV-2","CTAGAATTAAGCCGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","T55* K87Y D90K K198M",4
"lib1","SARS-CoV-2","CTAGAATTACAGGGGA",3,36.18,10.66,-0.11,0.06,2.86,1.1,0,">1 nonsynonymous","L5V G83D P197S",3
"lib1","SARS-CoV-2","CTAGAATTACTAAAGG",5,2.12,NA,NA,NA,NA,NA,NA,"stop","I2R I72*",2
"lib1","SARS-CoV-2","CTAGACAATACGGCAT",6,67.6,10.87,0.11,0.07,2.95,1,0,"1 nonsynonymous","S29D",1
"lib1","SARS-CoV-2","CTAGACAATTATTCGA",2,11.87,9.76,-1,0.04,2.96,1.05,0,">1 nonsynonymous","S36I K56G K87C",3
"lib1","SARS-CoV-2","CTAGACACACAGTTCC",1,23.46,8.25,-2.52,0.2,2.3,1.05,0.02,">1 nonsynonymous","N4D G146P N151K",3
"lib1","SARS-CoV-2","CTAGACACCACGTACG",3,78.62,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G86V K128M I138R",3
"lib1","SARS-CoV-2","CTAGACACTCATTATA",5,69.13,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9S S19R V71R P82Q",4
"lib1","SARS-CoV-2","CTAGACACTGATGCCA",5,37.11,6,-4.76,2,1.5,1.43,0.05,"1 nonsynonymous","F99P",1
"lib1","SARS-CoV-2","CTAGACAGAAGTCAGT",3,1.52,NA,NA,NA,NA,NA,NA,"stop","S41W P149*",2
"lib1","SARS-CoV-2","CTAGACAGCAATATGG",4,154.33,10.23,-0.53,0.04,2.9,1.02,0,">1 nonsynonymous","G9P I142Y K199R",3
"lib1","SARS-CoV-2","CTAGACATATTAGGAC",1,5.14,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S129M F167R",2
"lib1","SARS-CoV-2","CTAGACCAAGCGGCCA",2,28.62,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S19L G117A",2
"lib1","SARS-CoV-2","CTAGACCACACCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60D A190S",2
"lib1","SARS-CoV-2","CTAGACCACCTCTTCT",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L K94L S164K",3
"lib1","SARS-CoV-2","CTAGACCAGTCCCGCA",6,36.71,8.11,-2.65,0.37,1.5,1.08,0.07,">1 nonsynonymous","F62S D90T I104D",3
"lib1","SARS-CoV-2","CTAGACCTAAGTAACG",11,61.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20A V77R G83F E135S E141C T201P",6
"lib1","SARS-CoV-2","CTAGACCTGGTCCCCG",6,118.82,10.69,-0.08,0.02,2.91,1.01,0,">1 nonsynonymous","T100I I104A",2
"lib1","SARS-CoV-2","CTAGACCTTAGCTGAT",9,41.82,10.21,-0.56,0.08,2.77,1,0,">1 nonsynonymous","I2A L60R E135S T201W",4
"lib1","SARS-CoV-2","CTAGACGAAAAGAGTA",4,9.74,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","L57I P82L K87A D98L",4
"lib1","SARS-CoV-2","CTAGACGCCTACCATC",7,150.97,9.93,-0.83,0.08,2.17,1.01,0,">1 nonsynonymous","T85A P96H",2
"lib1","SARS-CoV-2","CTAGACGGGTCTGATG",10,184.59,10.75,-0.01,0.07,2.85,1.08,0,">1 nonsynonymous","I2L T85V",2
"lib1","SARS-CoV-2","CTAGACGGTATCAGAC",13,3.06,NA,NA,NA,NA,NA,NA,"stop","K114W P133L Y178*",3
"lib1","SARS-CoV-2","CTAGACGTCCGATAGC",3,68.05,8.4,-2.36,0.22,1.91,1.16,0.02,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","CTAGACTCACCTGGGC",5,167.2,10.6,-0.16,0.03,2.91,1.03,0,"1 nonsynonymous","N120W",1
"lib1","SARS-CoV-2","CTAGACTCCCAGCCAC",6,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L Y93F G101N P149M F167P",5
"lib1","SARS-CoV-2","CTAGACTCGAAGATTT",5,81.1,8.63,-2.13,0.1,2.38,1.1,0,">1 nonsynonymous","V52H Y119D E141N P149R",4
"lib1","SARS-CoV-2","CTAGACTCGACTAGTC",1,30.07,9.3,-1.47,0.18,2.7,1.16,0.01,"1 nonsynonymous","Y175N",1
"lib1","SARS-CoV-2","CTAGACTCGCGCACAT",3,117.08,10.41,-0.35,0.05,2.92,1.05,0,">1 nonsynonymous","V11F A33L",2
"lib1","SARS-CoV-2","CTAGACTCTAACTCCG",3,27.29,8.16,-2.6,0.25,1.5,1.06,0.02,">1 nonsynonymous","G9V V32H W106C",3
"lib1","SARS-CoV-2","CTAGACTGAAGTGTAA",2,67.83,10.67,-0.09,0.05,2.9,1.06,0,">1 nonsynonymous","L5Q E141S N171H",3
"lib1","SARS-CoV-2","CTAGACTTCACAAACA",2,2.18,NA,NA,NA,NA,NA,NA,"stop","T85C D90Y N130* S139N L162N",5
"lib1","SARS-CoV-2","CTAGAGAAAGAACAAG",1,13.58,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","E10H D68N N107Y",3
"lib1","SARS-CoV-2","CTAGAGAAGATCAGCA",3,19.56,6,-4.76,1.6,2.04,1.06,0,">1 nonsynonymous","C6A Y123R P161I",3
"lib1","SARS-CoV-2","CTAGAGAATGGCGCAA",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F G9M N13K C49R K114M",5
"lib1","SARS-CoV-2","CTAGAGACCATAATAT",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150N N157K L183R",3
"lib1","SARS-CoV-2","CTAGAGACTGGCGTTA",2,2.52,NA,NA,NA,NA,NA,NA,"stop","N1* A14W D90W N171* Q176E V182I",6
"lib1","SARS-CoV-2","CTAGAGAGAATATTGA",7,38.93,6.5,-4.26,0.35,1.5,1.1,0.02,">1 nonsynonymous","E10V D59G D90V L95G",4
"lib1","SARS-CoV-2","CTAGAGAGGTCGATTG",2,26.6,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16L Y119T K132P I138P F156S",5
"lib1","SARS-CoV-2","CTAGAGATCGAATCAG",1,31.02,10.72,-0.05,0.06,2.88,1.09,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","CTAGAGATTATTGCAA",4,1.45,NA,NA,NA,NA,NA,NA,"stop","F44* K56L",2
"lib1","SARS-CoV-2","CTAGAGATTTAAACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N24* N64C D90I I104V",4
"lib1","SARS-CoV-2","CTAGAGCAATGAGTAA",10,85.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G83V V103E W106I K128T",4
"lib1","SARS-CoV-2","CTAGAGCCGTTGATAG",1,1.38,NA,NA,NA,NA,NA,NA,"stop","T3M V77* V103P K114L I138M C158V P169M H189N",8
"lib1","SARS-CoV-2","CTAGAGCTGGCCTAAG",5,71.35,10.73,-0.03,0.1,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGAGGAAAAGTAAC",1,9.54,10.37,-0.39,0.25,2.65,1.17,0.01,">1 nonsynonymous","S45Y T55H",2
"lib1","SARS-CoV-2","CTAGAGGAAACTGGCG",3,101.84,10.72,-0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGAGGGCTCCGCCT",4,57.51,9.78,-0.98,0.08,2.42,1.11,0,">1 nonsynonymous","R27M L60M I88L",3
"lib1","SARS-CoV-2","CTAGAGGTAAAAGTTG",5,37.87,7.57,-3.19,0.29,1.5,1.14,0.03,">1 nonsynonymous","E10N C61I Y66I A89T P149C H189S",6
"lib1","SARS-CoV-2","CTAGAGTAAAGCTGAA",5,0.75,NA,NA,NA,NA,NA,NA,"stop","S19* V32P C61V R127D K199S",5
"lib1","SARS-CoV-2","CTAGAGTACGCATTTG",4,45.2,8.2,-2.56,0.27,1.5,1.08,0.02,">1 nonsynonymous","K48W Y121F L162V",3
"lib1","SARS-CoV-2","CTAGAGTAGGTAGACA",11,90.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C31L I80L L122T E141H S164V",5
"lib1","SARS-CoV-2","CTAGAGTCCATGACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10H G83* Y93* T100M I104L S139F",6
"lib1","SARS-CoV-2","CTAGAGTCCGTTATCC",3,21.59,10.64,-0.13,0.06,3,1,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","CTAGATAAACCAAGAG",10,170.73,10.45,-0.31,0.03,2.92,1,0,">1 nonsynonymous","N1V S29M",2
"lib1","SARS-CoV-2","CTAGATAACCACTACA",3,1.18,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","CTAGATAATGGCAAAG",6,0.05,NA,NA,NA,NA,NA,NA,"stop","F70* V115G C158S",3
"lib1","SARS-CoV-2","CTAGATACAGCAAATT",4,43.35,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F12Y Y50I N110L",3
"lib1","SARS-CoV-2","CTAGATACGCGGCTAC",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L I80S K87A",3
"lib1","SARS-CoV-2","CTAGATACTGATCTTG",12,3.39,NA,NA,NA,NA,NA,NA,"stop","V71D N107* P177L",3
"lib1","SARS-CoV-2","CTAGATAGCTACTCGC",12,2.19,NA,NA,NA,NA,NA,NA,"stop","I138* T201K",2
"lib1","SARS-CoV-2","CTAGATAGGAAAGCAA",3,84.65,9.17,-1.6,0.21,1.71,1.12,0.02,">1 nonsynonymous","G86N E141Q",2
"lib1","SARS-CoV-2","CTAGATATAATTTTGT",5,85.45,9.93,-0.83,0.09,2.44,1.04,0,">1 nonsynonymous","T3N D59M N120C",3
"lib1","SARS-CoV-2","CTAGATATACATTTAT",3,46.23,10.62,-0.14,0.09,2.87,1.04,0,">1 nonsynonymous","L60W Q163L P191N",3
"lib1","SARS-CoV-2","CTAGATATTTCTTCAG",3,60.58,9.29,-1.48,0.17,1.67,1.13,0.01,">1 nonsynonymous","N58L A89G",2
"lib1","SARS-CoV-2","CTAGATCAAGCCCAAG",11,2.18,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","CTAGATCAGCATGAGT",7,53.13,10.72,-0.05,0.04,2.88,1.07,0,"1 nonsynonymous","Q163R",1
"lib1","SARS-CoV-2","CTAGATCCATACGAAA",6,49.47,9.91,-0.85,0.19,2.11,1.05,0.01,">1 nonsynonymous","Q144D Y178L",2
"lib1","SARS-CoV-2","CTAGATCCATAGACTA",1,52.08,10.81,0.05,0.06,2.86,1.08,0,"1 nonsynonymous","S129K",1
"lib1","SARS-CoV-2","CTAGATCCTAAACAAT",9,13.08,NA,NA,NA,NA,NA,NA,"stop","T3S S45K G86V Y123* P197S",5
"lib1","SARS-CoV-2","CTAGATCTAAAATGTC",4,1.15,NA,NA,NA,NA,NA,NA,"stop","L5* D59E D112H",3
"lib1","SARS-CoV-2","CTAGATCTAAACGCTG",3,53.61,10.7,-0.06,0.04,2.95,1,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","CTAGATGAACAAGGCT",2,18.35,10.73,-0.03,0.07,2.98,1,0,">1 nonsynonymous","T85M N110L",2
"lib1","SARS-CoV-2","CTAGATGAACACTTCT",3,69.91,10.76,-0.01,0.08,2.86,1.08,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","CTAGATGAAGTGCAAT",7,0.54,NA,NA,NA,NA,NA,NA,"stop","A33L L57V C150K G174*",4
"lib1","SARS-CoV-2","CTAGATGAGACAGCCT",4,32.59,8.29,-2.48,0.18,2.31,1.17,0.01,">1 nonsynonymous","A22N S43F L60V Y143E T201A",5
"lib1","SARS-CoV-2","CTAGATGAGTTGCAAA",5,33.01,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","L5P A33Q V77P Q84L F99P V103P Y165K",7
"lib1","SARS-CoV-2","CTAGATGCTACATACT",6,18.22,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","W23H V103R Y119V T201Y",4
"lib1","SARS-CoV-2","CTAGATGCTTTACATT",4,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q K87L L183R T201P",4
"lib1","SARS-CoV-2","CTAGATGTAAAGTCCC",2,11.08,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G74S K94T",2
"lib1","SARS-CoV-2","CTAGATGTGAAGTACA",9,176.09,10.72,-0.05,0.05,2.88,1.09,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","CTAGATTAATAACAAA",4,75.06,9.96,-0.8,0.09,2.35,1.02,0,">1 nonsynonymous","C6I K56Q W106F N130K",4
"lib1","SARS-CoV-2","CTAGATTAATAGTGTG",1,7.14,9.83,-0.93,0.17,2.67,1.16,0.01,">1 nonsynonymous","A42S F156V",2
"lib1","SARS-CoV-2","CTAGATTGTCAAAGCA",2,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T G83L F99C K114F P149L",5
"lib1","SARS-CoV-2","CTAGATTTAACAAACT",3,54.05,10.24,-0.52,0.05,2.79,1.02,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","CTAGATTTCAAGTTGC",2,11.58,6.11,-4.66,0.5,3,1.11,0.01,">1 nonsynonymous","G155F Y175E",2
"lib1","SARS-CoV-2","CTAGATTTGTTCCAAT",7,53.36,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T46Y C102Y D112K",3
"lib1","SARS-CoV-2","CTAGCAAAAAGTTCCT",3,61.03,10.6,-0.17,0.04,2.87,1.08,0,">1 nonsynonymous","P54E K128M",2
"lib1","SARS-CoV-2","CTAGCAAAACGTAACG",11,128.44,8.56,-2.21,0.15,1.78,1.15,0.01,">1 nonsynonymous","V52M Y165I",2
"lib1","SARS-CoV-2","CTAGCAAAATAGAAAA",5,100.97,10.69,-0.07,0.04,2.9,1.06,0,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","CTAGCAAACTAGTTAC",7,89.62,9.99,-0.77,0.04,2.72,1.01,0,">1 nonsynonymous","C61P T140W N151S",3
"lib1","SARS-CoV-2","CTAGCAAAGCAATTTA",1,24.24,10.7,-0.06,0.1,2.88,1.06,0,"1 nonsynonymous","Y39Q",1
"lib1","SARS-CoV-2","CTAGCAACAGGAATCT",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C K94S F99Q N110F",4
"lib1","SARS-CoV-2","CTAGCAACCCAGAAGG",1,30.6,10.61,-0.15,0.1,2.82,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCAACTCCAAGGT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","G9* K48R V77M",3
"lib1","SARS-CoV-2","CTAGCAACTTTGGCGA",7,76.06,10.81,0.04,0.09,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCAAGAATAGAGG",3,21.54,6.44,-4.32,0.54,1.5,1.18,0.03,">1 nonsynonymous","F8S R27F T170P",3
"lib1","SARS-CoV-2","CTAGCAAGCTACAAAC",1,17.26,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F44C T63K D75R S139V",4
"lib1","SARS-CoV-2","CTAGCAATGTCATATA",3,50.62,9.76,-1,0.07,2.8,1.05,0,">1 nonsynonymous","N58E N130I E141I E154I",4
"lib1","SARS-CoV-2","CTAGCAATTAGTAAAT",1,56.28,10.61,-0.16,0.04,2.88,1.08,0,">1 nonsynonymous","T55S G116A N130A",3
"lib1","SARS-CoV-2","CTAGCAATTCTACACA",1,40.1,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28K A42K D59G A81K Y91V K114P",6
"lib1","SARS-CoV-2","CTAGCACAACCAAAAC",3,65.36,10.62,-0.15,0.06,2.92,1.01,0,">1 nonsynonymous","T63K T100A",2
"lib1","SARS-CoV-2","CTAGCACAACTGACCA",5,82.74,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I142G Q176I",2
"lib1","SARS-CoV-2","CTAGCACAAGAAGCAA",2,36.32,10.14,-0.62,0.05,2.84,1.03,0,"1 nonsynonymous","D97Q",1
"lib1","SARS-CoV-2","CTAGCACTGGAACCGG",5,89.24,6.16,-4.61,0.73,1.5,1.21,0.02,">1 nonsynonymous","N24E F44T G86L",3
"lib1","SARS-CoV-2","CTAGCACTGTTACCCG",1,34.16,6.23,-4.54,0.69,1.5,1.17,0.02,">1 nonsynonymous","V20R P82Q Q84H Y143K C150S T170Y",6
"lib1","SARS-CoV-2","CTAGCAGAAACCTGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I80L N92* P161S S200*",4
"lib1","SARS-CoV-2","CTAGCAGAAGGTTCGG",4,3437.22,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11F E135V R179N",3
"lib1","SARS-CoV-2","CTAGCATAAACGGTGA",3,29.22,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D59S G116S R179G",3
"lib1","SARS-CoV-2","CTAGCATAAATGAGAC",3,35.26,10.83,0.07,0.06,2.99,1,0,">1 nonsynonymous","A105S K198E",2
"lib1","SARS-CoV-2","CTAGCATAATGTTTGG",9,97.29,10.89,0.13,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCATTACGAATGC",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A K87D",2
"lib1","SARS-CoV-2","CTAGCATTCATCCTAA",10,1.65,NA,NA,NA,NA,NA,NA,"stop","L57* R73A P133G",3
"lib1","SARS-CoV-2","CTAGCATTGTCGATTA",4,29.99,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","W106G Y143D",2
"lib1","SARS-CoV-2","CTAGCCAAATTTGACA",1,12.43,9.68,-1.09,0.48,1.54,1.03,0.05,"1 nonsynonymous","C49A",1
"lib1","SARS-CoV-2","CTAGCCAGAAAGTGGG",11,216.77,10.51,-0.25,0.04,2.81,1.03,0,">1 nonsynonymous","L5S Y123F R136L I142V",4
"lib1","SARS-CoV-2","CTAGCCAGACACACGG",2,87.43,10.72,-0.04,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCCAGACGATATA",5,4.33,NA,NA,NA,NA,NA,NA,"stop","I28* K87G S147A",3
"lib1","SARS-CoV-2","CTAGCCAGACTTGAGA",2,67.86,10.46,-0.3,0.06,2.9,1.03,0,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","CTAGCCAGCTCCCAAC",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R G116C V180G",3
"lib1","SARS-CoV-2","CTAGCCAGGCCGACAG",1,62.02,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","G9W A22W N92T Q176S",4
"lib1","SARS-CoV-2","CTAGCCAGTCTCTATG",5,2.08,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","CTAGCCCATAATAGTT",4,32.78,10.14,-0.62,0.11,2.3,1.05,0.01,">1 nonsynonymous","G9C K56L Q84T I104Y",4
"lib1","SARS-CoV-2","CTAGCCCGAAATGGGC",2,9.28,10.57,-0.2,0.12,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCCCTGTGTTGAT",8,59.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C49V P82N D90F",3
"lib1","SARS-CoV-2","CTAGCCCTTGAACTAC",6,85.99,9.27,-1.5,0.08,2.43,1.09,0,">1 nonsynonymous","T3K V32M S113Y P169H",4
"lib1","SARS-CoV-2","CTAGCCTAAAAAATAA",6,75.9,10.74,-0.02,0.06,2.92,1.06,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","CTAGCCTAAGTGTACG",11,80.22,10.16,-0.6,0.07,2.95,1,0,"1 nonsynonymous","F156Q",1
"lib1","SARS-CoV-2","CTAGCCTGAGTAGATT",1,16.64,10.54,-0.22,0.08,2.99,1.02,0,">1 nonsynonymous","V37I K56E N110S G196W",4
"lib1","SARS-CoV-2","CTAGCGATACAGCAAA",1,13.04,10.99,0.23,0.09,3,1,0,">1 nonsynonymous","G9H K26L",2
"lib1","SARS-CoV-2","CTAGCGCAATGACGAA",2,14.93,10.18,-0.59,0.12,2.66,1.07,0,">1 nonsynonymous","S139R T140S V153Y",3
"lib1","SARS-CoV-2","CTAGCGGTAACCTATG",3,12.64,6,-4.76,2,2.27,1.13,0.01,">1 nonsynonymous","I104E G146V",2
"lib1","SARS-CoV-2","CTAGCGTAAAAACTAT",4,38.77,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","V103F D112K",2
"lib1","SARS-CoV-2","CTAGCGTGATCTTGCT",4,33.07,9.31,-1.45,0.1,2.81,1.13,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","CTAGCTAAAACGATCA",5,2.15,NA,NA,NA,NA,NA,NA,"stop","F12T A18T K26Q L38S S45K D90* V103P P149K G166M",9
"lib1","SARS-CoV-2","CTAGCTAAACGTGCTT",2,9.69,6,-4.76,2,3,1.02,0,">1 nonsynonymous","V20G V153R C158R",3
"lib1","SARS-CoV-2","CTAGCTAATACCATAC",6,39.4,6,-4.76,1.71,1.5,1.41,0.05,">1 nonsynonymous","D112I N130I P161H",3
"lib1","SARS-CoV-2","CTAGCTACACTTATTT",2,9.7,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D68E A89T D112L",3
"lib1","SARS-CoV-2","CTAGCTACCCGCCACG",3,0.51,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTAGCTAGAAACTGAG",1,27.71,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A14T A42R D112V Q176M",4
"lib1","SARS-CoV-2","CTAGCTAGAAAGCATG",9,72.06,10.74,-0.02,0.07,2.87,1.08,0,">1 nonsynonymous","I80L L122S P197Y",3
"lib1","SARS-CoV-2","CTAGCTAGACAATAAT",2,5.45,NA,NA,NA,NA,NA,NA,"stop","Y50* N130V",2
"lib1","SARS-CoV-2","CTAGCTCAGCAATCGC",6,84.31,9.41,-1.35,0.11,2.03,1.12,0.01,">1 nonsynonymous","N30W T55C E141C",3
"lib1","SARS-CoV-2","CTAGCTCATAACGGTT",4,114.71,9.66,-1.11,0.05,2.82,1.11,0,">1 nonsynonymous","V37Q G146R",2
"lib1","SARS-CoV-2","CTAGCTCTCCCAATAA",3,25.98,9.54,-1.23,0.2,1.98,1.11,0.02,">1 nonsynonymous","S41K D98A G155C",3
"lib1","SARS-CoV-2","CTAGCTCTCCCCATCA",1,13.95,9.51,-1.26,0.38,1.5,1.06,0.06,">1 nonsynonymous","N40H D137A",2
"lib1","SARS-CoV-2","CTAGCTCTGAATCGAG",5,61.45,10.06,-0.71,0.12,2.15,1.05,0.01,">1 nonsynonymous","V52D G196W",2
"lib1","SARS-CoV-2","CTAGCTGCCATACCTA",6,76.19,7.78,-2.98,0.24,1.5,1.09,0.02,"1 nonsynonymous","D112G",1
"lib1","SARS-CoV-2","CTAGCTGCTAAATATC",2,68.59,10.61,-0.15,0.05,2.9,1.05,0,">1 nonsynonymous","T46I T140A",2
"lib1","SARS-CoV-2","CTAGCTTACTCAACAT",2,2.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7M",1
"lib1","SARS-CoV-2","CTAGCTTAGAAACACC",3,3.65,NA,NA,NA,NA,NA,NA,"stop","S41V L57E G86F R127L A145L V180*",6
"lib1","SARS-CoV-2","CTAGCTTGGTCACCAG",6,135.58,9.65,-1.11,0.1,2.58,1.09,0,">1 nonsynonymous","S139A G152P",2
"lib1","SARS-CoV-2","CTAGCTTTACACTATA",1,20.8,8.34,-2.43,0.18,1.93,1.07,0.01,">1 nonsynonymous","A14S R27C Q176S",3
"lib1","SARS-CoV-2","CTAGGAAAGAAGAAAA",5,32.75,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G101N G166V N171S",3
"lib1","SARS-CoV-2","CTAGGAAATAGAGAGT",2,31.42,6.02,-4.75,0.37,2.2,1.14,0,">1 nonsynonymous","V11L D68M T100C Q144Y",4
"lib1","SARS-CoV-2","CTAGGAACGGTGAATA",5,39.14,6.3,-4.46,0.26,1.57,1.15,0,">1 nonsynonymous","T3Y F167T",2
"lib1","SARS-CoV-2","CTAGGAATACGATTCC",4,44.02,6.39,-4.38,0.43,1.5,1.15,0.01,">1 nonsynonymous","P82V D90P T201K",3
"lib1","SARS-CoV-2","CTAGGAATATGCGTCC",1,21.85,9.7,-1.06,0.17,2.28,1.08,0.01,">1 nonsynonymous","C6S D59L K198S",3
"lib1","SARS-CoV-2","CTAGGAATGAATCCCA",2,13.92,10.28,-0.49,0.07,2.73,1,0.01,">1 nonsynonymous","A81C P149T",2
"lib1","SARS-CoV-2","CTAGGAATTATAGAGG",2,19.34,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A67S N107W",2
"lib1","SARS-CoV-2","CTAGGACAATAGTAAT",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50W S139G",2
"lib1","SARS-CoV-2","CTAGGACAGCAACATG",1,22.44,6,-4.76,2,1.5,1.38,0.05,">1 nonsynonymous","S69K C150N N171R",3
"lib1","SARS-CoV-2","CTAGGACGAGGACACC",3,34.5,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P7Y V37T A42K G117V S139C Y143C",6
"lib1","SARS-CoV-2","CTAGGACGGGCTTTGT",8,98.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64S A89R N120T",3
"lib1","SARS-CoV-2","CTAGGACTAGTATCGA",9,1.02,NA,NA,NA,NA,NA,NA,"stop","A42L G101Y K199*",3
"lib1","SARS-CoV-2","CTAGGACTTATAATCT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","CTAGGACTTTAAACTC",4,25.33,9.97,-0.79,0.16,2.45,1.01,0.01,">1 nonsynonymous","L57S G83R",2
"lib1","SARS-CoV-2","CTAGGAGAAATGTGGG",1,9.8,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","T3P G86E G152L",3
"lib1","SARS-CoV-2","CTAGGAGCACCCCAAG",3,25.95,10.84,0.07,0.1,2.92,1.02,0,"1 nonsynonymous","K48D",1
"lib1","SARS-CoV-2","CTAGGAGCCACTCTCT",3,45.99,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5S S69E S139L G174R G196W",5
"lib1","SARS-CoV-2","CTAGGAGCCCACCTAA",1,9.17,10.14,-0.62,0.13,2.98,1.01,0.01,"1 nonsynonymous","T170A",1
"lib1","SARS-CoV-2","CTAGGATAAGCGCTAT",6,0.37,NA,NA,NA,NA,NA,NA,"stop","F17* V37L N107F E141Y",4
"lib1","SARS-CoV-2","CTAGGATACTCCGTAA",4,85.48,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D112R S139D",2
"lib1","SARS-CoV-2","CTAGGATATTATTACT",9,265.72,10.65,-0.12,0.04,2.92,1.04,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","CTAGGATCGATTTATT",13,97.88,7.58,-3.18,0.27,1.5,1.08,0.02,">1 nonsynonymous","N107S S139W",2
"lib1","SARS-CoV-2","CTAGGATGAAGTCACT",5,74.8,8.44,-2.33,0.15,1.5,1.11,0.01,">1 nonsynonymous","Y35K R136C",2
"lib1","SARS-CoV-2","CTAGGCACAGTACTCA",6,110.94,10.75,-0.02,0.07,2.91,1.02,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","CTAGGCATGAATTTTT",2,13,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","Y91L G101C",2
"lib1","SARS-CoV-2","CTAGGCATGCTTAATT",2,30.71,6.47,-4.29,0.53,1.5,1.13,0.03,">1 nonsynonymous","V103W T140S G166T",3
"lib1","SARS-CoV-2","CTAGGCCATAACATCG",4,33.04,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V103F F160D",2
"lib1","SARS-CoV-2","CTAGGCCATGCTGGGG",5,23.68,9.41,-1.36,0.09,2.69,1.14,0,">1 nonsynonymous","G155W T170Q",2
"lib1","SARS-CoV-2","CTAGGCGAAATAGACC",1,12.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14L V32T W106R F126W E154F T201G",6
"lib1","SARS-CoV-2","CTAGGCGCAAACTGTA",4,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P N120I R124T S139V V173P",5
"lib1","SARS-CoV-2","CTAGGCGCAGAGGAGG",7,202.17,10.64,-0.13,0.04,2.92,1.04,0,"1 nonsynonymous","S41H",1
"lib1","SARS-CoV-2","CTAGGCTCGTATACAA",5,233.53,9.44,-1.33,0.11,1.75,1.12,0,">1 nonsynonymous","Y66R Y178A",2
"lib1","SARS-CoV-2","CTAGGCTCTCCCAACT",1,27.68,9.52,-1.25,0.24,1.69,1.09,0.03,"1 nonsynonymous","N13P",1
"lib1","SARS-CoV-2","CTAGGCTTATAGGTCT",2,10.98,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12D Y175K",2
"lib1","SARS-CoV-2","CTAGGCTTCACACTAC",8,2.17,NA,NA,NA,NA,NA,NA,"stop","C31F V37F A81V R127* Y159N",5
"lib1","SARS-CoV-2","CTAGGGAACAAAGATT",3,48.5,10.22,-0.55,0.05,2.8,1.01,0,">1 nonsynonymous","A18E V37D A105T",3
"lib1","SARS-CoV-2","CTAGGGCAAGAACGAA",1,50.85,8.66,-2.1,0.15,1.89,1.15,0.01,">1 nonsynonymous","F12N C61V",2
"lib1","SARS-CoV-2","CTAGGGCGTATCTTCA",7,125.7,8.57,-2.2,0.12,2,1.12,0,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","CTAGGGCGTTGCCACC",3,37.72,6.99,-3.77,0.14,1.5,1.08,0.01,">1 nonsynonymous","C150I E154D",2
"lib1","SARS-CoV-2","CTAGGGTGACTCGAGT",1,1.01,NA,NA,NA,NA,NA,NA,"stop","K48R A89K N157L Q176*",4
"lib1","SARS-CoV-2","CTAGGTAAAGCAACCG",12,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D S41H T46Q K94R A105K V173I",6
"lib1","SARS-CoV-2","CTAGGTAAGCCATTCG",8,68.31,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N4D W23M P133S F167E",4
"lib1","SARS-CoV-2","CTAGGTAATAAATATA",1,8.72,6,-4.76,2,1.5,1.13,0.06,">1 nonsynonymous","V103S N157S",2
"lib1","SARS-CoV-2","CTAGGTATAAAACGCA",4,0.4,NA,NA,NA,NA,NA,NA,"stop","F62R I88*",2
"lib1","SARS-CoV-2","CTAGGTATTGTCAATG",2,37.09,10.62,-0.14,0.06,2.93,1.04,0,">1 nonsynonymous","K114M P149L",2
"lib1","SARS-CoV-2","CTAGGTCAAACTTAGA",2,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","CTAGGTCACTATCTTT",8,177.19,9.18,-1.58,0.1,2.37,1.11,0,"1 nonsynonymous","Y165I",1
"lib1","SARS-CoV-2","CTAGGTCATAGGAACA",4,42.96,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","W23P C61R I88F F126M Y159R",5
"lib1","SARS-CoV-2","CTAGGTCGCCATATAT",7,149.68,6.29,-4.47,0.56,1.5,1.13,0.02,">1 nonsynonymous","G9I L125D V180T",3
"lib1","SARS-CoV-2","CTAGGTCTGACAGGCA",1,105.31,6.15,-4.62,0.72,1.5,1.14,0.02,">1 nonsynonymous","N157T G174V",2
"lib1","SARS-CoV-2","CTAGGTGGAATATCGT",3,40.68,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A18L V37R C61H I88H V103K",5
"lib1","SARS-CoV-2","CTAGGTGGTAGCTTGG",2,22.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53W K87F P96Q N171W",4
"lib1","SARS-CoV-2","CTAGGTTAATGCAACG",6,148.84,10.74,-0.02,0.07,2.86,1.08,0,"1 nonsynonymous","H189T",1
"lib1","SARS-CoV-2","CTAGGTTAGGATGCTG",3,39.03,10.12,-0.64,0.1,2.67,1.01,0,"1 nonsynonymous","Y93F",1
"lib1","SARS-CoV-2","CTAGGTTGAGCACTTC",3,29.04,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P82G I104V P169V",3
"lib1","SARS-CoV-2","CTAGGTTGTAAACTAT",1,13.01,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","E10R Y50I K94P N107V G146K Y159V",6
"lib1","SARS-CoV-2","CTAGTAAAATGAATGA",9,183.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16N L38T I72H Y93P K128R",5
"lib1","SARS-CoV-2","CTAGTAAAGCATATCT",3,1.79,NA,NA,NA,NA,NA,NA,"stop","D112* Y119G C158* Q163*",4
"lib1","SARS-CoV-2","CTAGTAAAGTAATCAC",15,112.75,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A42R L131P I138P",3
"lib1","SARS-CoV-2","CTAGTAAATAAAACAC",3,19.53,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S29Q C102L W106C",3
"lib1","SARS-CoV-2","CTAGTAAATGGCAAAA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","C6I V52* P82A",3
"lib1","SARS-CoV-2","CTAGTAACACGTTTTA",6,89.06,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G101F S129D R179A",3
"lib1","SARS-CoV-2","CTAGTAACAGACTCAT",2,39.36,6.07,-4.7,0.43,1.5,1.1,0,">1 nonsynonymous","Y35S L95A N157D",3
"lib1","SARS-CoV-2","CTAGTAACATCACCGG",1,19.12,8.93,-1.83,0.22,2.79,1.13,0.02,">1 nonsynonymous","N1R K114S P169H T170K",4
"lib1","SARS-CoV-2","CTAGTAAGAGTCCGTT",7,14.55,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","CTAGTAAGCGAATTCT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","Y21* D90R",2
"lib1","SARS-CoV-2","CTAGTAAGTCGTACAA",3,118.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36T A42S P54D N92L T140K Y178A",6
"lib1","SARS-CoV-2","CTAGTAATAATGTTAC",5,5.57,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","CTAGTAATAGAGAAAT",4,35.04,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R25I Y39D T63S G83F",4
"lib1","SARS-CoV-2","CTAGTAATATAACTTA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V Y123W G155C S164T",4
"lib1","SARS-CoV-2","CTAGTAATCAACTGTG",9,98.23,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P54Q L95N G116V I138S P161H",5
"lib1","SARS-CoV-2","CTAGTAATGGTCGGGT",5,69.63,10.23,-0.53,0.04,2.84,1.04,0,">1 nonsynonymous","C61L K128L I138V V173A",4
"lib1","SARS-CoV-2","CTAGTAATTAGTAAGT",11,96.29,9.62,-1.14,0.15,1.75,1.12,0.01,">1 nonsynonymous","L60Y V103C",2
"lib1","SARS-CoV-2","CTAGTACGACCAATTC",5,39.9,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F62I S69F L95M D112L N120S L183K",6
"lib1","SARS-CoV-2","CTAGTACGGTCTAGGT",2,100.77,8.99,-1.77,0.15,1.55,1.09,0.01,">1 nonsynonymous","R25C K199N",2
"lib1","SARS-CoV-2","CTAGTACTATTTCCAT",7,147.83,10.77,0,0.08,2.91,1.04,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","CTAGTACTCAATATTG",2,47.27,10.77,0.01,0.07,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CTAGTACTTGGGCACT",1,2.78,NA,NA,NA,NA,NA,NA,"stop","N40K S45W V71L G116* L125T",5
"lib1","SARS-CoV-2","CTAGTACTTTGCCACA",1,148.76,10.31,-0.46,0.08,2.19,1.04,0,">1 nonsynonymous","S29W A81C Q163V",3
"lib1","SARS-CoV-2","CTAGTAGACAAGCGCA",2,16.52,10.6,-0.17,0.08,2.8,1.1,0,">1 nonsynonymous","T3W Y35I",2
"lib1","SARS-CoV-2","CTAGTAGACCTCTAAA",1,24.03,9,-1.76,0.15,2.78,1.21,0.01,">1 nonsynonymous","N157H T201A",2
"lib1","SARS-CoV-2","CTAGTAGACTCCACAA",2,26.83,10.49,-0.28,0.1,2.97,1,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","CTAGTATAGACTCAAA",4,55.12,9.57,-1.19,0.08,2.48,1.09,0,">1 nonsynonymous","Y35Q T148C",2
"lib1","SARS-CoV-2","CTAGTATCCACAGCAG",2,48.9,10.91,0.14,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTAGTATCCTGAATAA",4,66.07,10.65,-0.12,0.07,2.92,1.04,0,">1 nonsynonymous","R16Y C61V K199R",3
"lib1","SARS-CoV-2","CTAGTATGGAACTCGT",4,53.07,10.78,0.02,0.06,2.94,1.01,0,">1 nonsynonymous","L95I Q163R K199H",3
"lib1","SARS-CoV-2","CTAGTATGGTAGTAAG",14,91.92,6,-4.76,1.89,1.5,1.19,0.01,">1 nonsynonymous","C49V A81V D97E",3
"lib1","SARS-CoV-2","CTAGTATTTTTGTGAT",2,10.13,6.12,-4.65,2,1.5,1.22,0.04,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","CTAGTCACGTTGCACA",3,1.48,NA,NA,NA,NA,NA,NA,"stop","D90I P96* V180*",3
"lib1","SARS-CoV-2","CTAGTCAGTATTTTTA",3,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56D L131K",2
"lib1","SARS-CoV-2","CTAGTCATACAATGAG",5,27.51,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C6L L38F W106G F160I",4
"lib1","SARS-CoV-2","CTAGTCATTAAAACAG",5,84.69,10.52,-0.24,0.04,2.91,1.03,0,">1 nonsynonymous","N13S S184T",2
"lib1","SARS-CoV-2","CTAGTCATTCTTACAC",9,74.4,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G83P N109Q P161T",3
"lib1","SARS-CoV-2","CTAGTCATTCTTAGAG",4,61.13,9.01,-1.75,0.08,2.79,1.1,0,">1 nonsynonymous","F47M T170L",2
"lib1","SARS-CoV-2","CTAGTCCAAACTAGTT",3,18.15,10.31,-0.46,0.06,3,1,0,">1 nonsynonymous","K128S I138F",2
"lib1","SARS-CoV-2","CTAGTCCAGGGCAAAA",2,74.21,9.62,-1.15,0.08,2.61,1.02,0,">1 nonsynonymous","D68M K87M N130K",3
"lib1","SARS-CoV-2","CTAGTCCATAAGTATA",4,22.72,10.1,-0.67,0.1,2.5,1.07,0,">1 nonsynonymous","Y91R P149E",2
"lib1","SARS-CoV-2","CTAGTCCCCCATTGAT",2,32.79,10.38,-0.38,0.08,2.65,1.03,0,">1 nonsynonymous","A14C F160M",2
"lib1","SARS-CoV-2","CTAGTCCCGAACAAAC",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D D34H D90W P96N",4
"lib1","SARS-CoV-2","CTAGTCCGACGGAGGT",3,2.33,NA,NA,NA,NA,NA,NA,"stop","V20*",1
"lib1","SARS-CoV-2","CTAGTCCGGACAATAA",3,55.28,9.69,-1.07,0.05,2.86,1.06,0,"1 nonsynonymous","T170P",1
"lib1","SARS-CoV-2","CTAGTCCTCCTAAAAA",5,118.14,10.28,-0.49,0.05,2.84,1,0,">1 nonsynonymous","D34C N110Y",2
"lib1","SARS-CoV-2","CTAGTCGAATTCGATG",1,12.37,8.68,-2.09,0.16,1.8,1.11,0.01,">1 nonsynonymous","T3M D59L Q84S D98L N120R",5
"lib1","SARS-CoV-2","CTAGTCTATAATTAAG",1,19.26,6.12,-4.65,1.03,1.5,1.15,0.03,">1 nonsynonymous","F8N A14V V52I T100A K114M N130M T140L G152V",8
"lib1","SARS-CoV-2","CTAGTCTTATCAACAA",4,48.67,8.72,-2.04,0.22,1.72,1.08,0.02,">1 nonsynonymous","G83V G146Q",2
"lib1","SARS-CoV-2","CTAGTGACCAAATCGG",6,182.2,10.17,-0.6,0.05,2.94,1.01,0,">1 nonsynonymous","L5A S41L L125A",3
"lib1","SARS-CoV-2","CTAGTGACGTTTTCTA",1,25.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F44C S113A R127L",3
"lib1","SARS-CoV-2","CTAGTGACTACTGGAG",8,286.98,9.27,-1.49,0.15,1.5,1.08,0.01,">1 nonsynonymous","G83Y V173T",2
"lib1","SARS-CoV-2","CTAGTGATGTTGCCCT",1,29.28,10.15,-0.62,0.12,2.6,1,0.01,">1 nonsynonymous","P7Y D90T",2
"lib1","SARS-CoV-2","CTAGTGATTAAAAAAA",2,6.32,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V77G A89S",2
"lib1","SARS-CoV-2","CTAGTGCAAAACCCGC",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Q P54V C150L V173P",4
"lib1","SARS-CoV-2","CTAGTGCAAAAGACTT",5,103.44,6.38,-4.38,0.39,1.5,1.16,0.01,">1 nonsynonymous","V65M G83W S113R",3
"lib1","SARS-CoV-2","CTAGTGCACTCCAAAC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K N40Y",2
"lib1","SARS-CoV-2","CTAGTGCCTTATAGCA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V P7Y A81S Q144L",4
"lib1","SARS-CoV-2","CTAGTGCTCCGAGAGT",6,129.5,10.69,-0.08,0.05,2.9,1.07,0,">1 nonsynonymous","T85M L122R",2
"lib1","SARS-CoV-2","CTAGTGTCATGGTGGC",7,29.42,10.98,0.21,0.08,2.95,1,0,">1 nonsynonymous","S53K V173R",2
"lib1","SARS-CoV-2","CTAGTGTGAGCAAGCG",5,49.75,10.62,-0.14,0.06,2.93,1.02,0,">1 nonsynonymous","R73K D98K",2
"lib1","SARS-CoV-2","CTAGTTAAAAACAGAT",1,120.23,10.7,-0.07,0.04,2.93,1.04,0,">1 nonsynonymous","L111A T201R",2
"lib1","SARS-CoV-2","CTAGTTACCAAAAGAT",9,29.9,8.54,-2.22,0.38,1.5,1,0.08,">1 nonsynonymous","A67T V103G N110V P169R",4
"lib1","SARS-CoV-2","CTAGTTAGCACTATAT",2,6.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V T55W R136S",3
"lib1","SARS-CoV-2","CTAGTTATAACACCAA",3,21.63,6.34,-4.42,0.66,1.5,1.12,0.03,">1 nonsynonymous","C6I D59E D98L Y143R C195S",5
"lib1","SARS-CoV-2","CTAGTTCAAACAAGCT",17,92.31,6,-4.76,0.78,1.5,1.15,0.01,">1 nonsynonymous","Y93D R127S G174W",3
"lib1","SARS-CoV-2","CTAGTTCACATCAACA",2,73.51,8.45,-2.31,0.13,2.81,1.07,0.01,">1 nonsynonymous","S45H F126G A192E",3
"lib1","SARS-CoV-2","CTAGTTCATCTTAATC",6,21.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P7L N24H V77L A81S F99S A105W N157D",7
"lib1","SARS-CoV-2","CTAGTTCATTAACAAT",9,71.02,10.48,-0.29,0.04,2.94,1.02,0,">1 nonsynonymous","D59Q Q84T D90A",3
"lib1","SARS-CoV-2","CTAGTTCTCGGTGGCG",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F A67S T85R F160H",4
"lib1","SARS-CoV-2","CTAGTTGAATACAAAA",5,99.53,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","G172Q",1
"lib1","SARS-CoV-2","CTAGTTGACTAATTTA",2,4.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1L",1
"lib1","SARS-CoV-2","CTAGTTGCACCGAAAT",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116T L122Y L162A",3
"lib1","SARS-CoV-2","CTAGTTGCCCGAAGTA",2,1.08,NA,NA,NA,NA,NA,NA,"stop","P7A C49* P82D",3
"lib1","SARS-CoV-2","CTAGTTTACAAGCAAT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","L95* N118P",2
"lib1","SARS-CoV-2","CTAGTTTACCTCATAG",5,102.8,10.75,-0.02,0.07,2.89,1.06,0,">1 nonsynonymous","T100A L122R",2
"lib1","SARS-CoV-2","CTAGTTTATAATCTAC",5,57.78,9.26,-1.51,0.06,2.87,1.13,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","CTAGTTTCATGGACTT",1,12.19,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y50W Y93R",2
"lib1","SARS-CoV-2","CTAGTTTCCTCTATGA",7,55.54,9.47,-1.29,0.19,1.56,1.16,0.02,">1 nonsynonymous","C6W D90S L122I",3
"lib1","SARS-CoV-2","CTAGTTTTCATTAGCG",1,32,10.79,0.02,0.09,2.9,1.08,0,">1 nonsynonymous","T3Q Y66T T148S",3
"lib1","SARS-CoV-2","CTAGTTTTGGCTGACT",1,7.47,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y39K W106E E141I F160I V173P",5
"lib1","SARS-CoV-2","CTATAAAAAATTCCAT",4,62.89,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C61V N107A V115Q Y175M",4
"lib1","SARS-CoV-2","CTATAAAAACAAAAGT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","Y35* C49R S69R R124S",4
"lib1","SARS-CoV-2","CTATAAAAGCATTACT",5,34.89,6.26,-4.5,0.89,1.5,1.18,0.03,">1 nonsynonymous","V103L F134T G146D Q168I",4
"lib1","SARS-CoV-2","CTATAAAAGTACTCCT",9,0,NA,NA,NA,NA,NA,NA,"stop","P7A Y91L G155*",3
"lib1","SARS-CoV-2","CTATAAAATAAGATCT",5,109.24,9.73,-1.03,0.05,2.74,1.1,0,">1 nonsynonymous","Y39L Y119N",2
"lib1","SARS-CoV-2","CTATAAAATTATTTTA",3,43.58,8.74,-2.02,0.17,1.5,1.1,0.01,">1 nonsynonymous","I28E L60S",2
"lib1","SARS-CoV-2","CTATAAACACTCTAAT",5,28.03,6.13,-4.63,0.79,1.5,1.14,0.03,">1 nonsynonymous","T63N A81L R127V V173I",4
"lib1","SARS-CoV-2","CTATAAACATGAAAAA",2,24.69,9.57,-1.19,0.14,1.92,1.09,0.01,">1 nonsynonymous","K87T A105T D137E V173M",4
"lib1","SARS-CoV-2","CTATAAAGACAATGCA",1,32.54,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I28S Y50N D68P D75L Y123F",5
"lib1","SARS-CoV-2","CTATAAAGATTGGCAT",2,8.92,10.34,-0.43,0.17,2.78,1.22,0.01,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CTATAAAGCAACAAGT",15,464.69,10.76,-0.01,0.05,2.9,1.04,0,"1 nonsynonymous","Y39R",1
"lib1","SARS-CoV-2","CTATAAAGGGTAAAAT",3,24.51,10.77,0.01,0.1,2.88,1.04,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","CTATAAAGGTAACAGT",1,1.21,NA,NA,NA,NA,NA,NA,"stop","C61* R73V K199M",3
"lib1","SARS-CoV-2","CTATAAATAACTCGAA",2,18.25,10.44,-0.32,0.04,2.93,1.02,0,"1 nonsynonymous","F134D",1
"lib1","SARS-CoV-2","CTATAAATAATGGATG",1,1.71,NA,NA,NA,NA,NA,NA,"stop","T3R C102A N120D P149*",4
"lib1","SARS-CoV-2","CTATAAATCGTATCAG",3,49.33,8.66,-2.11,0.2,1.9,1.14,0.01,">1 nonsynonymous","V32A N64V N118W",3
"lib1","SARS-CoV-2","CTATAAATGAACAACC",2,25.76,6.16,-4.6,1.39,1.5,1.31,0.04,">1 nonsynonymous","D34T P149H L162R",3
"lib1","SARS-CoV-2","CTATAAATGCTACAAT",3,24.56,10.62,-0.14,0.09,2.83,1.09,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","CTATAAATTAAAAACT",1,45.14,10.8,0.03,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATAAATTACAACAC",2,9.87,9.79,-0.97,0.24,1.93,1.13,0.04,">1 nonsynonymous","L5K D34L",2
"lib1","SARS-CoV-2","CTATAAATTCGACTTA",3,25.59,6.27,-4.5,1.16,1.5,1.22,0.07,">1 nonsynonymous","G117L L162Y",2
"lib1","SARS-CoV-2","CTATAAATTTGAACAG",4,10.78,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T15I L60T F99S S113P T201I",5
"lib1","SARS-CoV-2","CTATAACAAACCAGTT",10,59.58,10.75,-0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATAACAAATGGTAT",3,24.39,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T15S D68R Y93E T100V S113E E141V",6
"lib1","SARS-CoV-2","CTATAACACAAAGAGA",16,205.66,10.32,-0.44,0.04,2.93,1.04,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","CTATAACACGTTCACT",2,9.2,9.31,-1.45,0.13,2.61,1.03,0.01,"1 nonsynonymous","G74Y",1
"lib1","SARS-CoV-2","CTATAACATATGTTAC",1,27.79,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D34G F99M S147A F185Y",4
"lib1","SARS-CoV-2","CTATAACCCAAACGTT",10,42.94,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N40F D90E P96H K128L R136I G174F",6
"lib1","SARS-CoV-2","CTATAACCCCCAGACA",5,50.19,9.49,-1.27,0.1,2.65,1.12,0,">1 nonsynonymous","L122V I142S",2
"lib1","SARS-CoV-2","CTATAACCGACAAGCA",2,53.52,10.79,0.03,0.08,2.83,1.08,0,"1 nonsynonymous","S36E",1
"lib1","SARS-CoV-2","CTATAACGAACTTACG",5,88.51,10.19,-0.58,0.08,2.64,1.03,0,">1 nonsynonymous","A14T T100H",2
"lib1","SARS-CoV-2","CTATAACGCCGGGACT",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V N64M G155I",3
"lib1","SARS-CoV-2","CTATAACTAAGCTTAA",2,11.3,10.86,0.09,0.1,3,1,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","CTATAACTCTCCTACG",4,37.4,10.67,-0.09,0.04,2.93,1.03,0,">1 nonsynonymous","G152S P191R",2
"lib1","SARS-CoV-2","CTATAACTGATTTACG",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L C49S D97M",3
"lib1","SARS-CoV-2","CTATAAGCAGCAGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25N Y165S",2
"lib1","SARS-CoV-2","CTATAAGCATGATGTG",3,48.78,10.74,-0.02,0.05,2.89,1.1,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CTATAAGCCATTTCCT",3,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L K128R",2
"lib1","SARS-CoV-2","CTATAAGGAAACGAGA",2,45.88,10.76,0,0.09,2.85,1.07,0,"1 nonsynonymous","A190K",1
"lib1","SARS-CoV-2","CTATAAGTAAACCCGG",2,207.98,10.4,-0.36,0.04,2.89,1.01,0,">1 nonsynonymous","R16D D97E S129P",3
"lib1","SARS-CoV-2","CTATAAGTTATGGCCC",5,88.89,9.54,-1.22,0.06,2.91,1.04,0,">1 nonsynonymous","D59F Y119K",2
"lib1","SARS-CoV-2","CTATAATAAAGTTAAA",2,9.85,10.73,-0.04,0.09,2.97,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTATAATACGGTTTTA",3,10.62,10.3,-0.46,0.12,2.87,1.12,0.01,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","CTATAATAGTATGAAC",4,20.9,10.01,-0.75,0.16,2.33,1,0.01,">1 nonsynonymous","K56P F134M",2
"lib1","SARS-CoV-2","CTATAATATTAGCGCA",1,22.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S K48C S69M T140F",4
"lib1","SARS-CoV-2","CTATAATATTTCACAT",1,24.07,9.69,-1.07,0.27,1.5,1.06,0.04,">1 nonsynonymous","C6D N13A F44K S139G",4
"lib1","SARS-CoV-2","CTATAATCAAATCTAG",2,0.94,NA,NA,NA,NA,NA,NA,"stop","T55L I80L G86S T100S N130*",5
"lib1","SARS-CoV-2","CTATAATCATGCGTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42D Y119* G155L Y175T",4
"lib1","SARS-CoV-2","CTATAATCGTTAGCCT",3,13.37,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A42I V71G T85Q D98L K128V",5
"lib1","SARS-CoV-2","CTATAATCTAATTACC",2,22.45,10.82,0.05,0.1,2.87,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTATAATCTTTTAACA",1,28.96,10.14,-0.62,0.12,2.61,1.05,0.01,"1 nonsynonymous","P133K",1
"lib1","SARS-CoV-2","CTATAATGTCGAATAT",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M V182G T201K",3
"lib1","SARS-CoV-2","CTATAATTAAAATCGT",2,26.87,10.05,-0.72,0.13,2.28,1.05,0.01,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","CTATAATTATAACTAA",4,102.33,10.28,-0.49,0.05,2.85,1.05,0,">1 nonsynonymous","K26G V37T P197M",3
"lib1","SARS-CoV-2","CTATAATTCAAGTATC",7,165.28,9.86,-0.9,0.08,2.55,1.04,0,">1 nonsynonymous","F47C Y121Q",2
"lib1","SARS-CoV-2","CTATACAAACCAGTTG",1,30.27,10.55,-0.22,0.06,2.92,1.02,0,">1 nonsynonymous","D90R E141T T201L",3
"lib1","SARS-CoV-2","CTATACAAAGTATTTG",5,44.15,7.58,-3.19,0.36,1.5,1.26,0.03,">1 nonsynonymous","S43D D97T L122P",3
"lib1","SARS-CoV-2","CTATACAAATCGGTAT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","Q84N D97* S113D L122I R127L S200M",6
"lib1","SARS-CoV-2","CTATACAACCGCTAGA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","F70L D112*",2
"lib1","SARS-CoV-2","CTATACAACTTAGTAA",1,13.75,10.59,-0.17,0.1,2.86,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATACAAGACCCAAG",8,145.04,10.21,-0.56,0.02,2.92,1.02,0,">1 nonsynonymous","G83F G174T",2
"lib1","SARS-CoV-2","CTATACAATCCTCCGC",6,70.41,9.9,-0.86,0.1,2.34,1.07,0,">1 nonsynonymous","N40L A81K",2
"lib1","SARS-CoV-2","CTATACAATTAGGTCT",3,11.66,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","CTATACACTTTAGCCG",3,0.24,NA,NA,NA,NA,NA,NA,"stop","T15G T46I A81V S113T Y123E G152*",6
"lib1","SARS-CoV-2","CTATACATATGCCATT",2,39.15,6.19,-4.58,1.05,1.5,1.2,0.05,">1 nonsynonymous","G9R S19R G51S",3
"lib1","SARS-CoV-2","CTATACATCAAACACT",16,44.97,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","T15E S41I C49M N157R",4
"lib1","SARS-CoV-2","CTATACATCAACAAAA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","N107K Q168*",2
"lib1","SARS-CoV-2","CTATACATTAACACGC",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I N40S W106L S113T",4
"lib1","SARS-CoV-2","CTATACATTGTCCCTA",2,13.32,6,-4.76,2,1.5,1.23,0.08,">1 nonsynonymous","A14S W106G Y121Q",3
"lib1","SARS-CoV-2","CTATACCACCGACTAC",5,60.5,10.71,-0.06,0.04,2.95,1.02,0,">1 nonsynonymous","L60Q P149M",2
"lib1","SARS-CoV-2","CTATACCACTCATTAA",7,127.89,6.6,-4.17,0.18,1.5,1.12,0,">1 nonsynonymous","K132V C158R",2
"lib1","SARS-CoV-2","CTATACCAGCGAGAGT",4,38.1,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y35V G83D N92I S139R E141W",5
"lib1","SARS-CoV-2","CTATACCCAACATTGC",4,27.2,10.35,-0.42,0.08,2.91,1.07,0,">1 nonsynonymous","N40R N120F",2
"lib1","SARS-CoV-2","CTATACCCAATACCTA",3,82.08,7.16,-3.6,0.19,1.5,1.16,0.01,">1 nonsynonymous","V103L E154Y",2
"lib1","SARS-CoV-2","CTATACCCCACATAAT",4,81.78,7.18,-3.59,0.12,2.19,1.11,0.01,">1 nonsynonymous","G146E T170L",2
"lib1","SARS-CoV-2","CTATACCCCTTGTATC",9,115.5,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25A S45Q L57R S139L",4
"lib1","SARS-CoV-2","CTATACCCTAACACAC",7,61.86,8.02,-2.75,0.24,1.5,1.11,0.02,">1 nonsynonymous","F12H L60C",2
"lib1","SARS-CoV-2","CTATACCGATTTTATT",3,18.19,10.63,-0.13,0.1,2.78,1.13,0,">1 nonsynonymous","S43L E141F",2
"lib1","SARS-CoV-2","CTATACCGTTAACGCG",11,46.09,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","D68R S200F",2
"lib1","SARS-CoV-2","CTATACGAACCAATAT",2,61.97,9.71,-1.05,0.08,2.75,1.05,0,">1 nonsynonymous","G9I Q84E S164G",3
"lib1","SARS-CoV-2","CTATACGATTAACAGG",6,216.86,8.98,-1.79,0.06,2.73,1.11,0,">1 nonsynonymous","F12L G146E P197K",3
"lib1","SARS-CoV-2","CTATACGCGTGATTGT",5,56.82,10.26,-0.5,0.05,2.82,1.02,0,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","CTATACGTTTTCTGTA",2,19.97,10.92,0.15,0.1,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATACTACCAAAACG",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L G74R F160I T201I",4
"lib1","SARS-CoV-2","CTATACTAGATGATCT",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C D90S F99A G116C E141G V153S",6
"lib1","SARS-CoV-2","CTATACTCATGTAATC",2,53.87,10.22,-0.55,0.07,2.52,1.05,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","CTATACTCCTGGACTC",2,60.98,9.38,-1.39,0.09,2.76,1.07,0,">1 nonsynonymous","P7S G152T G174L",3
"lib1","SARS-CoV-2","CTATACTCGAAATTCA",7,66.33,10.28,-0.48,0.04,2.83,1,0,">1 nonsynonymous","N4E S139V",2
"lib1","SARS-CoV-2","CTATACTCGGTACACC",1,12.37,6.08,-4.68,0.62,3,1.18,0.01,"1 nonsynonymous","F99D",1
"lib1","SARS-CoV-2","CTATACTGAGGTCGCT",4,36.93,8.88,-1.88,0.12,1.96,1.11,0.01,">1 nonsynonymous","C6T A14N A42S S139G P149I T201V",6
"lib1","SARS-CoV-2","CTATACTGGCTAAACT",7,201.09,8.91,-1.85,0.05,2.81,1.1,0,">1 nonsynonymous","G83C G117L",2
"lib1","SARS-CoV-2","CTATACTTCATACAAT",2,4.13,NA,NA,NA,NA,NA,NA,"stop","V77* K128Y E141L T148L S200L",5
"lib1","SARS-CoV-2","CTATACTTTTACGACG",2,0,NA,NA,NA,NA,NA,NA,"stop","C61Y G83Y P133L G166*",4
"lib1","SARS-CoV-2","CTATAGAAAAATTAAA",3,48.26,10.08,-0.68,0.1,2.65,1,0,">1 nonsynonymous","L60I Y91L G152R",3
"lib1","SARS-CoV-2","CTATAGAAAATGAATT",4,30.58,8.06,-2.7,0.26,1.5,1.15,0.02,">1 nonsynonymous","Y91M C102V",2
"lib1","SARS-CoV-2","CTATAGAACCAATCGA",1,9.8,10.31,-0.45,0.12,2.91,1.11,0,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","CTATAGAATAATGATA",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F T170F",2
"lib1","SARS-CoV-2","CTATAGAATAGTTGCA",4,21.74,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F47I D90H G146E C158K",4
"lib1","SARS-CoV-2","CTATAGACAAGATAAT",4,7.38,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","L5R L38Q N64W P177S",4
"lib1","SARS-CoV-2","CTATAGACCACTATTC",6,19.34,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G86K N107A Q144V",3
"lib1","SARS-CoV-2","CTATAGACGAATCCTG",3,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E S36R A89S T100V R136I F156G V173P",7
"lib1","SARS-CoV-2","CTATAGACTGATAGTA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","T15F G146* G152P",3
"lib1","SARS-CoV-2","CTATAGAGAGATGCAA",4,5.18,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","A33N C49I N58I D98V",4
"lib1","SARS-CoV-2","CTATAGAGGGCATGCA",2,40.5,6.22,-4.54,0.41,1.5,1.12,0.01,">1 nonsynonymous","Y35S G83V G146M",3
"lib1","SARS-CoV-2","CTATAGATAGGTCGAC",19,97.68,7.63,-3.13,0.31,1.5,1.09,0.03,">1 nonsynonymous","F8L A89K N171C",3
"lib1","SARS-CoV-2","CTATAGATTATGAACA",3,112.8,10.1,-0.66,0.07,2.58,1,0,">1 nonsynonymous","I28L Y39M V77R",3
"lib1","SARS-CoV-2","CTATAGCAATTAACAA",2,54.88,10.22,-0.55,0.06,2.84,1,0,">1 nonsynonymous","T46A T85G",2
"lib1","SARS-CoV-2","CTATAGCACAAGGCCG",4,19.05,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","A105C Q168P",2
"lib1","SARS-CoV-2","CTATAGCAGCTCACCA",15,120.93,6,-4.76,2,1.5,1.3,0.02,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","CTATAGCATTAATGCT",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28V Y165S K198Q",3
"lib1","SARS-CoV-2","CTATAGCCAAAACACG",7,18,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Q84I G166A L183P",3
"lib1","SARS-CoV-2","CTATAGCGCGGTAATG",3,29.6,8.61,-2.16,0.29,1.64,1.24,0.03,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","CTATAGCGCTACACCG",3,40.37,9.91,-0.85,0.16,2.03,1.01,0.01,">1 nonsynonymous","C49I F160N",2
"lib1","SARS-CoV-2","CTATAGGACACTGGCA",2,19.6,8.6,-2.16,0.15,2.87,1.07,0.02,">1 nonsynonymous","I142P G166I",2
"lib1","SARS-CoV-2","CTATAGGCGAACAACA",4,37.41,6.56,-4.21,0.55,1.5,1.15,0.04,">1 nonsynonymous","N107F G155R",2
"lib1","SARS-CoV-2","CTATAGGGGCCAACAT",2,0.33,NA,NA,NA,NA,NA,NA,"stop","V103F F126*",2
"lib1","SARS-CoV-2","CTATAGGTCCAGGAAA",2,8.37,10.68,-0.09,0.1,2.88,1.06,0.01,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","CTATAGTAACATTACG",11,188.1,10.57,-0.19,0.04,2.89,1.05,0,">1 nonsynonymous","K128V H189Y",2
"lib1","SARS-CoV-2","CTATAGTAAGTCCCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7I I80L Y119W K128*",4
"lib1","SARS-CoV-2","CTATAGTAGTTATGTA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L N107A F160Y",3
"lib1","SARS-CoV-2","CTATATAACAAGCTAA",1,8.5,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","G9L F44H K87Q C150I V180E",5
"lib1","SARS-CoV-2","CTATATAACACTGTAT",3,44.43,10.58,-0.19,0.07,2.93,1.01,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","CTATATAACAGGTCTG",1,3.81,NA,NA,NA,NA,NA,NA,"stop","K87N G101Y S108L K199*",4
"lib1","SARS-CoV-2","CTATATAACATGCGGG",8,41.32,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","A42S D90W F99S",3
"lib1","SARS-CoV-2","CTATATAACCTGAATG",4,58.2,6.09,-4.67,1.29,1.5,1.2,0.04,">1 nonsynonymous","L5P Y35D N92H F99H Y121L",5
"lib1","SARS-CoV-2","CTATATAACTATAAAA",3,7.3,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6I N13L C102H G117P G146T H189R",6
"lib1","SARS-CoV-2","CTATATAACTTAGCCG",4,80.49,10.67,-0.09,0.1,2.89,1.09,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","CTATATAAGACTATAT",2,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C V103D",2
"lib1","SARS-CoV-2","CTATATAAGGATTCCT",3,12.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64P A105Q",2
"lib1","SARS-CoV-2","CTATATAATACTCAAT",4,5.85,NA,NA,NA,NA,NA,NA,"stop","D34C F99L Y175S T201*",4
"lib1","SARS-CoV-2","CTATATAATGACCAAA",1,28.12,9.37,-1.4,0.2,1.96,1.15,0.02,">1 nonsynonymous","S19G D90L",2
"lib1","SARS-CoV-2","CTATATACAACAAATG",9,41.34,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F8K S29P S53V D90S N110V",5
"lib1","SARS-CoV-2","CTATATACATCAGCTA",5,4.46,NA,NA,NA,NA,NA,NA,"stop","N40I C61N P133* Q163P P197D",5
"lib1","SARS-CoV-2","CTATATACCTGGCTGA",4,7.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13T F62R D97C",3
"lib1","SARS-CoV-2","CTATATAGTGGCCGTT",9,107.42,10.79,0.02,0.05,2.94,1.02,0,"1 nonsynonymous","A190F",1
"lib1","SARS-CoV-2","CTATATATGACAAATG",1,35,10.36,-0.4,0.04,2.93,1.02,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","CTATATATGCATAGGT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","C61D G83N T100A N120I R127* P197N",6
"lib1","SARS-CoV-2","CTATATATGTCCTTCG",1,6.56,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N13I G86T G117S T140I G152F",5
"lib1","SARS-CoV-2","CTATATATTAAATACA",6,45.22,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S43I L60A I138V G172N G196Q",5
"lib1","SARS-CoV-2","CTATATATTCCAATCA",1,7.06,10.72,-0.04,0.06,2.97,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATATCAAAAAAGAT",1,61.56,10.69,-0.07,0.07,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CTATATCAATCGAACA",6,54.42,7.78,-2.99,0.27,1.5,1.08,0.02,">1 nonsynonymous","T55M L183A",2
"lib1","SARS-CoV-2","CTATATCAATGATTGA",1,18.03,9.87,-0.89,0.13,2.58,1.09,0.01,">1 nonsynonymous","C61D R136A F160Y P191S",4
"lib1","SARS-CoV-2","CTATATCGAGACTCTA",5,15.59,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","F62D L95S V173C",3
"lib1","SARS-CoV-2","CTATATCTATCGGCTT",8,3.66,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","CTATATCTTACACAGT",3,16.39,10.73,-0.03,0.08,3,1.01,0,"1 nonsynonymous","S43L",1
"lib1","SARS-CoV-2","CTATATGAAGCACCGT",1,13.9,10.65,-0.11,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CTATATGACACTCACA",2,9.68,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N4Q S19R S53F L60C V65W Y121Q",6
"lib1","SARS-CoV-2","CTATATGACCTTCTGT",3,113.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L131D G155Y",2
"lib1","SARS-CoV-2","CTATATGAGACTGAGC",3,50.22,9.61,-1.16,0.28,1.5,1.09,0.03,">1 nonsynonymous","P7I R127S N171S",3
"lib1","SARS-CoV-2","CTATATGATAACCTTG",1,10.33,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42I G116R G174I",3
"lib1","SARS-CoV-2","CTATATGCGATAACCT",11,252.69,10.23,-0.54,0.05,2.93,1.01,0,">1 nonsynonymous","Y35V C61A V65I K87S",4
"lib1","SARS-CoV-2","CTATATGTAAAAAACA",1,8.8,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","CTATATTAATCGTCCG",6,16.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K56P V103M P133W",3
"lib1","SARS-CoV-2","CTATATTACATATGAA",11,6.39,NA,NA,NA,NA,NA,NA,"stop","A33* G86S T201C",3
"lib1","SARS-CoV-2","CTATATTACCTTAAAA",6,0.49,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","CTATATTACGGGAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* T201S",2
"lib1","SARS-CoV-2","CTATATTACGGTATAG",1,123.49,10.37,-0.4,0.04,2.94,1,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","CTATATTCAGTACCTT",5,145.64,9.44,-1.33,0.08,2.32,1.09,0,">1 nonsynonymous","N13L V37R F126V",3
"lib1","SARS-CoV-2","CTATATTGAATACTGC",4,21.22,6,-4.76,2,3,1.23,0,">1 nonsynonymous","A18R V37Q F70P A89N",4
"lib1","SARS-CoV-2","CTATATTTCACGTTAA",2,6.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N A18L N64C V103S D112K F185H",6
"lib1","SARS-CoV-2","CTATCAAAAGCCGTAA",2,57.9,10.19,-0.57,0.05,2.79,1.02,0,">1 nonsynonymous","F134S G152S",2
"lib1","SARS-CoV-2","CTATCAAACCCCGCAA",2,10.3,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","C61R I72E A145S",3
"lib1","SARS-CoV-2","CTATCAAAGTGGAAGT",7,105.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L95K G152H Y178N L188G",4
"lib1","SARS-CoV-2","CTATCAAAGTTTAGCT",2,32.76,10.69,-0.08,0.06,2.9,1.09,0,"1 nonsynonymous","V32S",1
"lib1","SARS-CoV-2","CTATCAAATGATGTAT",6,58.27,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R25M K94Q T100L",3
"lib1","SARS-CoV-2","CTATCAAATTTCTTGA",1,5.11,9.73,-1.04,0.23,2.53,1.14,0.01,">1 nonsynonymous","N1F Y91H",2
"lib1","SARS-CoV-2","CTATCAACAATGGAAG",4,27.73,6,-4.76,1.92,1.5,1.17,0.04,">1 nonsynonymous","D112R G174E",2
"lib1","SARS-CoV-2","CTATCAACACGCACAA",3,101.32,10.81,0.04,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATCAACCATACATT",7,2.54,NA,NA,NA,NA,NA,NA,"stop","Y91T G117N S164V Y175*",4
"lib1","SARS-CoV-2","CTATCAACTAAACCAC",3,0,NA,NA,NA,NA,NA,NA,"stop","T85A N110*",2
"lib1","SARS-CoV-2","CTATCAACTTTAAGGG",7,17.83,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23T V103R Y159T",3
"lib1","SARS-CoV-2","CTATCAAGAACACACT",3,46.43,9.04,-1.72,0.17,1.73,1.19,0.01,">1 nonsynonymous","A42N G51S S69N",3
"lib1","SARS-CoV-2","CTATCAAGATGCCATT",11,126.06,10.28,-0.49,0.06,2.8,1,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","CTATCAATTTAAATAA",4,26.79,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y35V N58I D98S L183S",4
"lib1","SARS-CoV-2","CTATCACAAAATACGT",9,116.57,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T46M I72G P149D",3
"lib1","SARS-CoV-2","CTATCACAAGTTATGT",1,6.2,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y121M C158I C195Y",3
"lib1","SARS-CoV-2","CTATCACCAAATAACA",2,100.63,NA,NA,NA,NA,NA,NA,"stop","G116P R136G Y143W F156*",4
"lib1","SARS-CoV-2","CTATCACCTAGTACAC",2,48.89,8.75,-2.02,0.11,2.37,1.05,0,">1 nonsynonymous","N24G L60K G166C",3
"lib1","SARS-CoV-2","CTATCACGAATCTGTG",1,36.15,9.55,-1.21,0.09,2.73,1.13,0,">1 nonsynonymous","L125P F134H T148R",3
"lib1","SARS-CoV-2","CTATCACGCTAGCAAA",10,146.53,10.77,0.01,0.07,2.93,1.03,0,">1 nonsynonymous","N64F N130V",2
"lib1","SARS-CoV-2","CTATCAGGTTACCTTG",2,22.58,9.92,-0.84,0.09,2.37,1,0.01,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","CTATCAGTTATGCACC",1,8.26,9.36,-1.4,0.22,2.56,1.13,0.01,">1 nonsynonymous","N4D A14I R73A",3
"lib1","SARS-CoV-2","CTATCATAAAAGGGAT",3,132.37,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167S",1
"lib1","SARS-CoV-2","CTATCATAACATTGAC",6,14.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R A67N P82I W106F",4
"lib1","SARS-CoV-2","CTATCATACACTAAGA",3,6.24,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7A F12S L95R",3
"lib1","SARS-CoV-2","CTATCATATAAAGGTG",6,46.07,7.91,-2.86,0.16,1.5,1.17,0.01,">1 nonsynonymous","V11D Y119M",2
"lib1","SARS-CoV-2","CTATCATGCATTCGTC",9,45.89,10.69,-0.08,0.04,2.98,1,0,">1 nonsynonymous","K56G N120Y",2
"lib1","SARS-CoV-2","CTATCATTATTTCCAG",7,60.17,8.12,-2.65,0.2,1.89,1.13,0.02,">1 nonsynonymous","V37I F99L Y175N T201V",4
"lib1","SARS-CoV-2","CTATCATTGGTTCCAT",4,0,NA,NA,NA,NA,NA,NA,"stop","I28W D97G T100* C102F F126M",5
"lib1","SARS-CoV-2","CTATCATTTTAAACTT",2,14.66,6,-4.76,2,3,1.17,0,">1 nonsynonymous","C6L L95A F167Y V173K",4
"lib1","SARS-CoV-2","CTATCATTTTGCGTCC",5,52.49,10.12,-0.65,0.07,2.65,1.09,0,">1 nonsynonymous","S43K S69Q P149M",3
"lib1","SARS-CoV-2","CTATCCAAAGGATTAA",1,14.65,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G51W Y119M Y165R",3
"lib1","SARS-CoV-2","CTATCCAATAGACCAC",2,82.87,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7T N58T P82Q Y91A L122S R136W Y159R",7
"lib1","SARS-CoV-2","CTATCCACTATCCTAT",4,26.85,6.22,-4.54,0.27,1.78,1.08,0,">1 nonsynonymous","L60R Y175I",2
"lib1","SARS-CoV-2","CTATCCAGAGACATAA",9,52.84,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36R F62L V180E",3
"lib1","SARS-CoV-2","CTATCCAGGGAATTGA",3,95.83,8.87,-1.89,0.09,2.71,1.15,0,">1 nonsynonymous","S53T L60I R73N",3
"lib1","SARS-CoV-2","CTATCCATAATTCAGG",5,83.01,9.82,-0.95,0.13,2.31,1.06,0.01,">1 nonsynonymous","C31R K128V",2
"lib1","SARS-CoV-2","CTATCCATCATTATTG",2,0.29,NA,NA,NA,NA,NA,NA,"stop","I2* N64K",2
"lib1","SARS-CoV-2","CTATCCATGAAAATCG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125T F156L",2
"lib1","SARS-CoV-2","CTATCCATGACTTAGC",2,24,10.86,0.09,0.07,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CTATCCATGGGTCCTC",23,168.81,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S36V D90N P133L P161S V180N",5
"lib1","SARS-CoV-2","CTATCCATTAATATAG",1,23.54,9.9,-0.86,0.19,1.77,1.06,0.02,">1 nonsynonymous","T85I R127H",2
"lib1","SARS-CoV-2","CTATCCCACATTTTAT",3,47.11,6,-4.76,2,3,1.28,0,">1 nonsynonymous","F99T N110R T201E",3
"lib1","SARS-CoV-2","CTATCCCCATATACTT",2,11.51,10.85,0.09,0.1,2.91,1.07,0,">1 nonsynonymous","T85R L111Y",2
"lib1","SARS-CoV-2","CTATCCCCCAACGACA",4,26.49,6.06,-4.71,1.67,1.5,1.26,0.06,">1 nonsynonymous","T46G Y66S G83N N107R",4
"lib1","SARS-CoV-2","CTATCCCGACTCCGCC",5,0.47,NA,NA,NA,NA,NA,NA,"stop","N30Q W106L R124H T140*",4
"lib1","SARS-CoV-2","CTATCCCGCCTAGTTA",2,48.26,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V77S D97E Y119L G152L",4
"lib1","SARS-CoV-2","CTATCCCGCGTTCCAG",2,51.17,10.59,-0.17,0.11,2.92,1.05,0.01,"1 nonsynonymous","R27T",1
"lib1","SARS-CoV-2","CTATCCCTTTGATAAG",1,13.27,10.61,-0.15,0.13,2.94,1.02,0.01,">1 nonsynonymous","T3L G9A",2
"lib1","SARS-CoV-2","CTATCCGAAAAGTTCC",3,24.65,6,-4.76,2,2.61,1.2,0.01,">1 nonsynonymous","S43N Y93V",2
"lib1","SARS-CoV-2","CTATCCGAAATTAACT",3,27.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16S T46G P54L D90R S139C",5
"lib1","SARS-CoV-2","CTATCCGAATTGTCAA",6,47.83,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","K56C P96S W106L",3
"lib1","SARS-CoV-2","CTATCCGACACAAGTA",8,163.55,9.84,-0.93,0.06,2.32,1.04,0,">1 nonsynonymous","T63D V71A",2
"lib1","SARS-CoV-2","CTATCCGGTCCGCGGA",5,25.76,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R27P L95P G117P P149T",4
"lib1","SARS-CoV-2","CTATCCGTAAAACTGT",6,49.05,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N58S P161F V182S",3
"lib1","SARS-CoV-2","CTATCCGTACACACTC",2,4.92,NA,NA,NA,NA,NA,NA,"stop","P7* S147N",2
"lib1","SARS-CoV-2","CTATCCTACGAGCTTG",7,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y D34F S43F N58I D68L",5
"lib1","SARS-CoV-2","CTATCCTACTCAGATA",3,67.54,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Y50T S69K I80L G101V N120H",5
"lib1","SARS-CoV-2","CTATCCTCCATATGGC",1,57.64,10.82,0.05,0.08,2.87,1.07,0,"1 nonsynonymous","S36N",1
"lib1","SARS-CoV-2","CTATCCTCTTAACCAG",2,52.78,10.76,-0.01,0.05,2.95,1.02,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","CTATCCTGCGAACAAA",3,36.03,10.89,0.12,0.06,2.92,1.03,0,">1 nonsynonymous","A89S F160Y",2
"lib1","SARS-CoV-2","CTATCCTTATCTCGGG",4,0,NA,NA,NA,NA,NA,NA,"stop","F8G N58L A190*",3
"lib1","SARS-CoV-2","CTATCGAAGTAAGAAG",3,41.53,10.41,-0.35,0.09,2.72,1,0,">1 nonsynonymous","N130A T170A",2
"lib1","SARS-CoV-2","CTATCGAATAAAATCG",7,48.06,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S45W G86E Y159L",3
"lib1","SARS-CoV-2","CTATCGAATATGCACG",2,1.5,NA,NA,NA,NA,NA,NA,"stop","S43I L60S W106* D137R",4
"lib1","SARS-CoV-2","CTATCGACATAAGGAC",2,17.8,10.57,-0.19,0.04,2.94,1.03,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","CTATCGACTAGTGAGC",2,99.26,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F47G R127S D137P Q176P",4
"lib1","SARS-CoV-2","CTATCGAGGTCTAAAC",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L I104D L122K",3
"lib1","SARS-CoV-2","CTATCGATAAATCATA",3,31.2,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A18R A89V P96Y",3
"lib1","SARS-CoV-2","CTATCGCAGGCAAATA",4,0.46,NA,NA,NA,NA,NA,NA,"stop","G9* Y119V N151*",3
"lib1","SARS-CoV-2","CTATCGCCCCTTAAAA",4,2.94,NA,NA,NA,NA,NA,NA,"stop","V20N V37*",2
"lib1","SARS-CoV-2","CTATCGCGCTAGAAAA",10,83.1,10.8,0.04,0.05,2.98,1,0,">1 nonsynonymous","K128E P149H",2
"lib1","SARS-CoV-2","CTATCGCTCCCTCGTA",3,14.96,7.97,-2.79,0.33,1.5,1.16,0.03,">1 nonsynonymous","Y21T S41T A81S K128L T148A N171T",6
"lib1","SARS-CoV-2","CTATCGGATCATGGCA",7,83.07,8.36,-2.41,0.28,1.5,1.06,0.03,"1 nonsynonymous","R124A",1
"lib1","SARS-CoV-2","CTATCGGCTAGGCAAA",2,20.01,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V52Y D90M V103N R127V D137E",5
"lib1","SARS-CoV-2","CTATCGTACCAGTAGC",2,20.33,10.25,-0.52,0.13,2.83,1.02,0.01,">1 nonsynonymous","V37E N107S",2
"lib1","SARS-CoV-2","CTATCGTAGACACAAC",1,11.08,10.96,0.2,0.12,2.85,1.05,0.01,">1 nonsynonymous","K56M S129R",2
"lib1","SARS-CoV-2","CTATCGTAGCCGCATA",4,114,6.53,-4.24,0.42,1.5,1.14,0.02,">1 nonsynonymous","R73M S108P",2
"lib1","SARS-CoV-2","CTATCTAACACTCGAA",4,78.24,10.75,-0.01,0.07,2.94,1.05,0,">1 nonsynonymous","P54K D90A",2
"lib1","SARS-CoV-2","CTATCTAACCATAAAA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","S29V K48S F70* N118F",4
"lib1","SARS-CoV-2","CTATCTACACACCTAT",2,23.17,8.04,-2.72,0.21,1.5,1.12,0.01,">1 nonsynonymous","V37N A81C S139R F160I",4
"lib1","SARS-CoV-2","CTATCTACATGTTAGT",7,58.12,10.44,-0.33,0.06,2.83,1.05,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","CTATCTACGTACTTAT",1,31.53,8.26,-2.51,0.28,1.5,1.1,0.03,">1 nonsynonymous","G51N G83E D90K S147W Q168I",5
"lib1","SARS-CoV-2","CTATCTAGCGAGCCAA",4,51.56,10.42,-0.35,0.06,2.87,1.08,0,">1 nonsynonymous","T15K I138K",2
"lib1","SARS-CoV-2","CTATCTAGGTGCTATT",5,32.53,10.75,-0.02,0.09,2.93,1.04,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","CTATCTATTCCGGGTG",6,77.72,10.6,-0.17,0.04,2.92,1.06,0,">1 nonsynonymous","E10G R27K",2
"lib1","SARS-CoV-2","CTATCTCATATCCTCC",1,24.09,10.71,-0.06,0.06,2.92,1.04,0,">1 nonsynonymous","N4R V37D N151K",3
"lib1","SARS-CoV-2","CTATCTCCAAAAGAAG",13,36.42,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N1Y A81I A89R Q144F",4
"lib1","SARS-CoV-2","CTATCTCCATAAACAG",5,127.23,7.41,-3.35,0.17,1.96,1.19,0.01,">1 nonsynonymous","D90N Y175E K198D",3
"lib1","SARS-CoV-2","CTATCTCCCAAACAAA",2,26.43,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S19V N24V S69K",3
"lib1","SARS-CoV-2","CTATCTGAACGACGAC",6,4.21,NA,NA,NA,NA,NA,NA,"stop","Y39* T140Q S147G",3
"lib1","SARS-CoV-2","CTATCTGTATGAGGCC",1,31.16,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","CTATCTGTCCCCCATT",1,19.12,6,-4.76,1.19,3,1.18,0.01,">1 nonsynonymous","C6V F44L N58R C102F A145N Y178R",6
"lib1","SARS-CoV-2","CTATCTGTTTTATCAG",2,109.31,10.74,-0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATCTTAAAAATTAC",2,29.33,10.78,0.01,0.16,2.86,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTATCTTACCCGGCGA",4,41.3,10.81,0.05,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATCTTAGAAGTTGG",2,1.34,NA,NA,NA,NA,NA,NA,"stop","L5* R16N V32K L60P G86R E154R",6
"lib1","SARS-CoV-2","CTATCTTGTATAATAA",7,103.76,10.54,-0.22,0.05,2.89,1.02,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CTATCTTTAGCAAGAG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","A42D I88N G152S S184*",4
"lib1","SARS-CoV-2","CTATCTTTCCTAATAT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","Y50* S129M F167H Y175*",4
"lib1","SARS-CoV-2","CTATGAAAACAGATAA",2,18.22,9.63,-1.14,0.15,1.64,1.17,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","CTATGAAAGGCTATAC",8,88.86,10.72,-0.04,0.05,2.9,1.06,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","CTATGAACCCCGAGAA",6,127.21,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S43T A105V V173T",3
"lib1","SARS-CoV-2","CTATGAACTAAAACTA",5,124.08,10.26,-0.5,0.03,2.92,1.01,0,">1 nonsynonymous","P7S D98C",2
"lib1","SARS-CoV-2","CTATGAAGCACACAGT",5,16.32,9.63,-1.14,0.21,1.82,1.12,0.01,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","CTATGAATTCGTACCC",2,53.4,7.99,-2.77,0.14,1.93,1.12,0.01,">1 nonsynonymous","L122N A145W V173F",3
"lib1","SARS-CoV-2","CTATGACAGAACATTT",4,83.97,10.15,-0.61,0.07,2.71,1.01,0,"1 nonsynonymous","A18L",1
"lib1","SARS-CoV-2","CTATGACATAGCTATA",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T N107M Y121L E141R",4
"lib1","SARS-CoV-2","CTATGACATTACCGTA",8,130.84,6.37,-4.39,0.31,1.5,1.15,0.01,">1 nonsynonymous","A18T I28G T55I D90Y S184T",5
"lib1","SARS-CoV-2","CTATGACGATTCCATT",8,92.23,6,-4.76,1.22,1.5,1.26,0.02,">1 nonsynonymous","S69K T100Y G166I",3
"lib1","SARS-CoV-2","CTATGACTAGTAAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L Q84K G101V Y121N Q168R",5
"lib1","SARS-CoV-2","CTATGACTCACCAACA",3,32.25,8.73,-2.03,0.24,1.5,1.11,0.04,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","CTATGACTTGTTTTAA",11,3.85,NA,NA,NA,NA,NA,NA,"stop","A33* P96F N110* G146I G152R",5
"lib1","SARS-CoV-2","CTATGAGAAAAACGCT",1,7.44,10.46,-0.31,0.21,2.76,1,0.03,">1 nonsynonymous","V65I Y91K",2
"lib1","SARS-CoV-2","CTATGAGAAAGACCTG",2,5.81,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C49M V182F",2
"lib1","SARS-CoV-2","CTATGAGAAAGGATAG",1,10.62,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","G86Y G117Y V182T",3
"lib1","SARS-CoV-2","CTATGAGAACTACAAC",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K D34V S69G",3
"lib1","SARS-CoV-2","CTATGAGGAAACTGAC",1,8.83,6,-4.76,2,1.5,1.35,0.08,">1 nonsynonymous","W23L L57Y F99L Y119G T148Y",5
"lib1","SARS-CoV-2","CTATGAGGATACGACT",7,86.26,10.11,-0.65,0.08,2.77,1.01,0,">1 nonsynonymous","C61R N120L P169S",3
"lib1","SARS-CoV-2","CTATGAGGGGCTTCCA",2,3.74,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTATGAGGTAGACACA",7,24.1,6.1,-4.66,0.99,1.5,1.18,0.03,">1 nonsynonymous","T15A G51W L60K Y66F D98K T148P R179N",7
"lib1","SARS-CoV-2","CTATGAGTCAATTGCT",4,32.59,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G51N F167C",2
"lib1","SARS-CoV-2","CTATGATAAATGAGAA",1,17.59,10.78,0.02,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATGATAACATTGAC",1,60.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N92P L122T F160N T170Y",4
"lib1","SARS-CoV-2","CTATGATAATCCTAAA",2,43.3,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","S43R N130A I142S C158Y",4
"lib1","SARS-CoV-2","CTATGATCATTAGCAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","L57W Q176* F185Y",3
"lib1","SARS-CoV-2","CTATGATCTACGAGAA",1,45.41,10.11,-0.65,0.06,2.75,1.03,0,">1 nonsynonymous","S19T T100L",2
"lib1","SARS-CoV-2","CTATGATGAAAACAAG",1,5.36,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","K26Q C102G N120S",3
"lib1","SARS-CoV-2","CTATGATGCACAATCA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","E10V V32A N107A K114* G174W",5
"lib1","SARS-CoV-2","CTATGATTATATAAAT",2,1.95,NA,NA,NA,NA,NA,NA,"stop","D34H L60R R136* T201P",4
"lib1","SARS-CoV-2","CTATGATTCATATAAA",1,17,8.82,-1.95,0.13,2.78,1.09,0.01,">1 nonsynonymous","Y143E T201Q",2
"lib1","SARS-CoV-2","CTATGCAACAAAAATT",1,7.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20A D68S F167V",3
"lib1","SARS-CoV-2","CTATGCAACTCGTGGA",4,62.88,8.56,-2.2,0.26,1.5,1.07,0.03,">1 nonsynonymous","V11G D98E T148V",3
"lib1","SARS-CoV-2","CTATGCAATGGGTGCT",1,13.66,6,-4.76,2,3,1.07,0,">1 nonsynonymous","V37E C49F V77R G86S Q168W",5
"lib1","SARS-CoV-2","CTATGCACTTGGTGCC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","Y35T C61L F70L F99S S113E Y123G K128* R179A",8
"lib1","SARS-CoV-2","CTATGCATAAAGAATT",1,13.47,10.01,-0.76,0.11,2.42,1.07,0.01,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","CTATGCATATTTATTT",3,55.44,7.4,-3.37,0.26,1.5,1.09,0.02,">1 nonsynonymous","L57A K87A Y93F A190P",4
"lib1","SARS-CoV-2","CTATGCCAAAACGATG",4,116.68,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I88N Y143F F156H",3
"lib1","SARS-CoV-2","CTATGCCAATCACTTC",2,29.24,10.61,-0.16,0.05,2.89,1.08,0,">1 nonsynonymous","N1R S41G K199M",3
"lib1","SARS-CoV-2","CTATGCCAGAGTTAAC",1,11.63,6,-4.76,2,1.86,1.14,0.02,">1 nonsynonymous","I28V A42R W106L Y165L",4
"lib1","SARS-CoV-2","CTATGCCAGTAAACTA",1,18.77,6,-4.76,2,3,1.14,0,">1 nonsynonymous","K56V V180W",2
"lib1","SARS-CoV-2","CTATGCCCTACTACTA",7,120.57,10.5,-0.27,0.05,2.83,1.04,0,">1 nonsynonymous","R16N D98P T140G V153K",4
"lib1","SARS-CoV-2","CTATGCCGGGCGGACA",1,37.58,6,-4.76,1.03,1.5,1.09,0,">1 nonsynonymous","I104C I138P G172V",3
"lib1","SARS-CoV-2","CTATGCCGTGAATAGG",18,252.85,10.27,-0.49,0.04,2.75,1.02,0,"1 nonsynonymous","S139Y",1
"lib1","SARS-CoV-2","CTATGCCTGGTGCCTA",1,13.65,10.89,0.12,0.1,2.79,1.14,0,">1 nonsynonymous","V37I T201E",2
"lib1","SARS-CoV-2","CTATGCGATCAAATAG",7,8.72,NA,NA,NA,NA,NA,NA,"stop","W23* S113L V153I",3
"lib1","SARS-CoV-2","CTATGCGCCCTTAATG",2,24.44,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","I28T L38I L60E G166C",4
"lib1","SARS-CoV-2","CTATGCGCTTACTCTG",11,109.2,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","K26W S36N L60I P82K N151K Y178H",6
"lib1","SARS-CoV-2","CTATGCGGTTCTCCAA",3,15.36,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","T3S F17R G86H L95K",4
"lib1","SARS-CoV-2","CTATGCGTTAGCGAAT",3,55.01,9.68,-1.08,0.13,2.09,1.11,0.01,">1 nonsynonymous","S43Y A89M",2
"lib1","SARS-CoV-2","CTATGCTACGAAGAAA",2,28.54,10.37,-0.39,0.11,2.87,1.04,0,"1 nonsynonymous","A81V",1
"lib1","SARS-CoV-2","CTATGCTATAGTCCCA",3,0.23,NA,NA,NA,NA,NA,NA,"stop","S41* A81C D97L F126P",4
"lib1","SARS-CoV-2","CTATGCTCTCGGTAGA",9,187.29,10.37,-0.4,0.04,2.92,1.01,0,">1 nonsynonymous","A33L L60P S164A",3
"lib1","SARS-CoV-2","CTATGCTGCAACACGA",4,25.84,6.37,-4.4,0.6,1.77,1.22,0.02,">1 nonsynonymous","F44R N92G T148L",3
"lib1","SARS-CoV-2","CTATGCTGTACCTCAC",2,33.35,10.75,-0.01,0.06,2.94,1.05,0,"1 nonsynonymous","S147Y",1
"lib1","SARS-CoV-2","CTATGCTTCAAATCAC",3,76.62,10.64,-0.12,0.05,2.91,1.06,0,">1 nonsynonymous","V11I L122W",2
"lib1","SARS-CoV-2","CTATGCTTTGCTGAAG",16,111.97,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D97C Y165C",2
"lib1","SARS-CoV-2","CTATGGAAAAAAATAA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","D90C A105Y P197*",3
"lib1","SARS-CoV-2","CTATGGATTACTCTCA",4,21.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E T140F A190C",3
"lib1","SARS-CoV-2","CTATGGCACAATCTAT",4,81,10.86,0.1,0.06,2.93,1.03,0,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","CTATGGCGGGGATTGA",9,67.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K128V R179E",2
"lib1","SARS-CoV-2","CTATGGGCAAATTGCC",3,0.04,NA,NA,NA,NA,NA,NA,"stop","Y39C Y93D F99* F167G V173A",5
"lib1","SARS-CoV-2","CTATGGGCACGGGTTA",4,2.07,NA,NA,NA,NA,NA,NA,"stop","I80S K87* Y91G A192V",4
"lib1","SARS-CoV-2","CTATGGGGCCGTAACA",1,6.22,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F17L V77G Q84N E141F T170L",5
"lib1","SARS-CoV-2","CTATGGTAAATTAACA",2,42.04,10,-0.76,0.1,2.29,1.02,0,"1 nonsynonymous","G51F",1
"lib1","SARS-CoV-2","CTATGGTCCGCGGTCT",8,6.73,NA,NA,NA,NA,NA,NA,"stop","C61V S69W K87V G116* S139T S147R",6
"lib1","SARS-CoV-2","CTATGGTTAATCAAAC",3,84.14,10.81,0.05,0.05,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CTATGTACACTTAATG",9,19.81,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","V52S V103P",2
"lib1","SARS-CoV-2","CTATGTAGACTAATAC",3,14.65,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","I28A T63V T85E G146V",4
"lib1","SARS-CoV-2","CTATGTAGTTAACAAT",4,61.4,6.52,-4.24,0.37,1.5,1.1,0.01,">1 nonsynonymous","Y39I Y91D G116Y",3
"lib1","SARS-CoV-2","CTATGTATGGCGGCAT",12,66.06,6,-4.76,1.11,1.5,1.18,0.01,">1 nonsynonymous","V115T A145P R179G",3
"lib1","SARS-CoV-2","CTATGTATTTCAAATT",2,16.21,8.91,-1.85,0.44,1.55,1.17,0.07,">1 nonsynonymous","G86R N157V S200Y",3
"lib1","SARS-CoV-2","CTATGTCAGCCCGCAT",6,53.82,6,-4.76,2,3,1.17,0,">1 nonsynonymous","P177G L183M",2
"lib1","SARS-CoV-2","CTATGTCAGGAGAGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26G D34G K87T R124K",4
"lib1","SARS-CoV-2","CTATGTCCCATACGCA",7,37.1,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P96L Y123A",2
"lib1","SARS-CoV-2","CTATGTCCGTGATTCG",1,26.78,10.99,0.22,0.14,2.93,1.01,0.01,"1 nonsynonymous","V37H",1
"lib1","SARS-CoV-2","CTATGTGAATACAAAT",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A18P A33M D75R L95W",5
"lib1","SARS-CoV-2","CTATGTGAGTTAGTGC",14,270.03,10.65,-0.11,0.03,2.9,1.04,0,">1 nonsynonymous","T3V C195R K199T",3
"lib1","SARS-CoV-2","CTATGTGCGGATTTCT",9,78.74,8.27,-2.5,0.32,1.5,1.08,0.04,">1 nonsynonymous","F47I R127L",2
"lib1","SARS-CoV-2","CTATGTGGATGAATTG",4,46.28,10.68,-0.08,0.07,2.93,1.06,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","CTATGTTAGTGAACCT",1,75.63,10.43,-0.33,0.04,2.98,1,0,">1 nonsynonymous","G9M T55F P149R K198N",4
"lib1","SARS-CoV-2","CTATGTTATGATATCG",1,41.03,10.17,-0.59,0.12,2.35,1.01,0.01,">1 nonsynonymous","L5C V52S",2
"lib1","SARS-CoV-2","CTATGTTCATTGAAAG",5,121.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y50I F156Q G172V",3
"lib1","SARS-CoV-2","CTATGTTGAAAAGTGA",3,20.21,6,-4.76,0.95,3,1.19,0,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","CTATGTTTCGAACGAT",1,79.46,10.68,-0.09,0.04,2.92,1.06,0,"1 nonsynonymous","T85E",1
"lib1","SARS-CoV-2","CTATTAAAACGATAGG",1,114.02,9.14,-1.62,0.07,2.7,1.12,0,">1 nonsynonymous","N109Y N120Y S139T T201L",4
"lib1","SARS-CoV-2","CTATTAAACTAATCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G C150A",2
"lib1","SARS-CoV-2","CTATTAAACTATTCTG",2,104.17,9.12,-1.64,0.21,1.52,1.17,0.02,">1 nonsynonymous","D34T A67T",2
"lib1","SARS-CoV-2","CTATTAAATAGGTCCC",4,63.17,9.2,-1.56,0.08,2.8,1.13,0,">1 nonsynonymous","N118E L125S",2
"lib1","SARS-CoV-2","CTATTAAATGGTCACA",3,44.27,9.44,-1.33,0.14,2.03,1.04,0.01,">1 nonsynonymous","F12M L57A G116D",3
"lib1","SARS-CoV-2","CTATTAAATGTTCATT",3,35.48,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D59S P82N Y93H G116A C150S G172N",6
"lib1","SARS-CoV-2","CTATTAACAAGCACCC",2,17.19,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N64M I88R D97Y V103G G116C T140S",6
"lib1","SARS-CoV-2","CTATTAACAATGCCTA",5,69.2,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","P7I N110T Y121T K132E",4
"lib1","SARS-CoV-2","CTATTAACAGAGCAGC",5,61.53,9.71,-1.05,0.12,1.97,1.06,0.01,">1 nonsynonymous","N92A S200I",2
"lib1","SARS-CoV-2","CTATTAACCAACTAAA",2,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A D34L A89D W106D D137K Y178F",6
"lib1","SARS-CoV-2","CTATTAAGAACACGGC",5,0.82,NA,NA,NA,NA,NA,NA,"stop","N64G P96* N151*",3
"lib1","SARS-CoV-2","CTATTAAGAATCCACT",5,1.42,NA,NA,NA,NA,NA,NA,"stop","L60S F70V F99I N157I P169*",5
"lib1","SARS-CoV-2","CTATTAAGAGTTAGAG",3,39.59,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R124L D137V",2
"lib1","SARS-CoV-2","CTATTAAGCAACCCAA",3,9.1,8.35,-2.41,0.45,1.5,1.07,0.04,">1 nonsynonymous","N13T T63P V181A",3
"lib1","SARS-CoV-2","CTATTAAGCACTAAGT",3,36.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4S Y121D Q144I P197R",4
"lib1","SARS-CoV-2","CTATTAATTTAGCAAT",6,27.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14S Y21T P96Y",3
"lib1","SARS-CoV-2","CTATTACACCGATAAT",2,1.43,NA,NA,NA,NA,NA,NA,"stop","C6* F17E V37N S45A T100S I104T P177L",7
"lib1","SARS-CoV-2","CTATTACAGAAAAAGT",4,137.12,9.61,-1.15,0.06,2.77,1.08,0,"1 nonsynonymous","R73P",1
"lib1","SARS-CoV-2","CTATTACATTTGCGGT",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L S41N G86D W106T P169L",5
"lib1","SARS-CoV-2","CTATTACCTCTGTGCC",5,16.99,8.39,-2.38,0.32,1.7,1.25,0.03,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","CTATTACCTGTTATGA",2,36.9,10.85,0.08,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATTACGGGTGCAAC",3,19.21,10.09,-0.67,0.09,2.8,1,0,">1 nonsynonymous","V37E F44V L183F A190E",4
"lib1","SARS-CoV-2","CTATTACGTGCAAAAT",4,0.98,NA,NA,NA,NA,NA,NA,"stop","S139D N151*",2
"lib1","SARS-CoV-2","CTATTACTTATGCAAG",2,40.27,9.28,-1.48,0.06,2.77,1.16,0,">1 nonsynonymous","G9K F156L S164L",3
"lib1","SARS-CoV-2","CTATTAGAAAGATCCA",4,35.3,6.43,-4.33,0.56,1.5,1.14,0.03,">1 nonsynonymous","S19L C49K L57V N110D",4
"lib1","SARS-CoV-2","CTATTAGAAAGTGAAT",9,99.76,10.79,0.03,0.09,2.77,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATTAGATACTGACT",9,23.6,7.33,-3.43,0.25,2.28,1.1,0.02,">1 nonsynonymous","S41I D75Q T85M K94S I104M P133K",6
"lib1","SARS-CoV-2","CTATTAGCAATATCAC",4,0.03,NA,NA,NA,NA,NA,NA,"stop","N110R L122* C150D",3
"lib1","SARS-CoV-2","CTATTAGCATAACAGT",9,60.8,10.8,0.04,0.07,2.87,1.09,0,">1 nonsynonymous","G9S D98N L122C",3
"lib1","SARS-CoV-2","CTATTAGCCCAGTGAA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N D97W N109Y N118I Y123I Y165W V182F",7
"lib1","SARS-CoV-2","CTATTAGGCTGCGACT",2,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M T100S P149Y Q168T",4
"lib1","SARS-CoV-2","CTATTAGTAAATTAAA",5,23.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F70P G152V G174S P177H",4
"lib1","SARS-CoV-2","CTATTAGTATGCCTTG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N64Q P197*",2
"lib1","SARS-CoV-2","CTATTATATTGCCGCA",2,26.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19R D75Y D98L W106L G155V",5
"lib1","SARS-CoV-2","CTATTATCAAGCAAGT",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98V R124H S200F",3
"lib1","SARS-CoV-2","CTATTATCACATTTCC",2,74.84,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P96Q S139V Y143L Q168R",4
"lib1","SARS-CoV-2","CTATTATCATTTTAAA",8,19.52,6,-4.76,1.19,1.5,1.1,0.01,">1 nonsynonymous","A42P I88Y G116W T148D L162M",5
"lib1","SARS-CoV-2","CTATTATCCCGTATTT",7,45.41,10.03,-0.74,0.13,1.91,1.1,0.01,">1 nonsynonymous","T55N I80M V173L S184C",4
"lib1","SARS-CoV-2","CTATTATGACAAGAAT",6,20.55,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","D90Y V103A",2
"lib1","SARS-CoV-2","CTATTATTGAAAGAAG",5,19.25,6,-4.76,2,1.5,1.17,0.07,">1 nonsynonymous","V65E V103A",2
"lib1","SARS-CoV-2","CTATTATTGGCTAACC",2,77.63,10.79,0.03,0.07,2.88,1.03,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","CTATTCAAACGACAAT",1,13.84,9.62,-1.14,0.23,2.2,1.16,0.02,">1 nonsynonymous","N4T T15D V32K S129A G152C",5
"lib1","SARS-CoV-2","CTATTCAACCCACGCA",2,16.24,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","N92T T100N",2
"lib1","SARS-CoV-2","CTATTCAATATCGATT",5,58.07,7.6,-3.17,0.37,1.5,1.18,0.04,">1 nonsynonymous","N13T N64A N120H S139V G166Q",5
"lib1","SARS-CoV-2","CTATTCAATGGAAACA",1,33.1,10.68,-0.08,0.08,2.9,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTATTCACAAAAAACA",11,8842.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28K R136D",2
"lib1","SARS-CoV-2","CTATTCAGTTCATGTT",1,39.97,9.29,-1.47,0.1,1.95,1.09,0,"1 nonsynonymous","N92A",1
"lib1","SARS-CoV-2","CTATTCATGATATTCA",6,88.19,10.46,-0.3,0.03,2.91,1.05,0,">1 nonsynonymous","G83L S139R",2
"lib1","SARS-CoV-2","CTATTCATGGACGACA",6,43.2,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","I2F I80G L122K",3
"lib1","SARS-CoV-2","CTATTCCAATACCAAG",1,22.41,8.7,-2.07,0.15,1.76,1.24,0.01,">1 nonsynonymous","A89N N110T S129L",3
"lib1","SARS-CoV-2","CTATTCCACTCACCAA",1,30.42,10.74,-0.02,0.09,2.9,1.02,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","CTATTCCAGGATAATG",1,19.85,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A42S C158I",2
"lib1","SARS-CoV-2","CTATTCCCAGATGTAA",4,76.18,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37S F126K L131R",3
"lib1","SARS-CoV-2","CTATTCCCGTGGTCTA",2,54.14,10.74,-0.03,0.04,2.94,1.03,0,">1 nonsynonymous","S36V K56M K199P",3
"lib1","SARS-CoV-2","CTATTCCGTAGTAAAA",3,75.66,10.2,-0.57,0.1,2.62,1,0,">1 nonsynonymous","V52R H189P",2
"lib1","SARS-CoV-2","CTATTCGAAAGCAAAT",6,26.99,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","V32R C49L L162E",3
"lib1","SARS-CoV-2","CTATTCGAGATGTGAC",3,0.16,NA,NA,NA,NA,NA,NA,"stop","L5M A42Q L60R P133Y E141* F156M",6
"lib1","SARS-CoV-2","CTATTCGCAATAAAAC",7,152.68,10.81,0.04,0.08,2.87,1.08,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","CTATTCGCTAATCTTA",8,57.27,9.79,-0.98,0.11,2.13,1.08,0.01,">1 nonsynonymous","N1L C6R",2
"lib1","SARS-CoV-2","CTATTCTAAATCACCT",1,8.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35L S41N I88N",3
"lib1","SARS-CoV-2","CTATTCTAGACAAAAA",2,37.87,10.66,-0.1,0.06,2.93,1,0,">1 nonsynonymous","N1F L122N",2
"lib1","SARS-CoV-2","CTATTCTAGCCTACTT",1,21.16,10.34,-0.42,0.06,3,1,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","CTATTCTCGTCACCTA",1,13.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y66T R73P L95V S113R",4
"lib1","SARS-CoV-2","CTATTCTTATCTGATA",8,2.28,NA,NA,NA,NA,NA,NA,"stop","N107* P149E Y175S",3
"lib1","SARS-CoV-2","CTATTCTTCCAAGACA",4,47.64,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L5N N107R N118Y A145L G172R",5
"lib1","SARS-CoV-2","CTATTGAAACATATCG",4,27.23,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I28K T46I L183V",3
"lib1","SARS-CoV-2","CTATTGAAACCTCAGC",10,131.88,10.06,-0.71,0.09,2.52,1.01,0,">1 nonsynonymous","V32D R136L",2
"lib1","SARS-CoV-2","CTATTGAAATAAATAA",5,35.3,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","F70T",1
"lib1","SARS-CoV-2","CTATTGAACACTACAG",3,40.45,10.14,-0.63,0.08,2.71,1.07,0,"1 nonsynonymous","I88L",1
"lib1","SARS-CoV-2","CTATTGAACGCTTCAG",1,25.08,10.63,-0.13,0.11,2.93,1.03,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","CTATTGAAGTATTAAC",3,97.99,10.56,-0.21,0.05,2.84,1.1,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","CTATTGACGTTAACTA",2,15.58,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","S19K D68I",2
"lib1","SARS-CoV-2","CTATTGACTTAACGAT",3,53.3,9.9,-0.86,0.07,2.68,1.05,0,">1 nonsynonymous","Y39R L122A T148L G152I",4
"lib1","SARS-CoV-2","CTATTGAGAACTAAAT",6,55.94,8.61,-2.16,0.17,1.81,1.13,0.01,">1 nonsynonymous","T63L N107T",2
"lib1","SARS-CoV-2","CTATTGAGCGAATAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140Y",1
"lib1","SARS-CoV-2","CTATTGAGCGGTACTA",2,14.78,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D112P Y121M E141V G174W",4
"lib1","SARS-CoV-2","CTATTGAGTATACTCA",2,29.2,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","S36A I88R T201S",3
"lib1","SARS-CoV-2","CTATTGAGTCATTGTT",2,141.21,10.74,-0.03,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATTGAGTCGAGGCA",7,68.7,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I88T T140R G155F",3
"lib1","SARS-CoV-2","CTATTGAGTTCCGCCT",5,167.26,9.94,-0.83,0.04,2.88,1.02,0,">1 nonsynonymous","V37E Y91L S129A G155D",4
"lib1","SARS-CoV-2","CTATTGATAAATTATG",3,43.18,10.82,0.05,0.05,2.95,1.06,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","CTATTGATACACAAAC",5,11.59,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","F70V",1
"lib1","SARS-CoV-2","CTATTGATCACAATAT",4,38.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34T D90S N151T P177R",4
"lib1","SARS-CoV-2","CTATTGATTTTCCATA",2,44.78,10.75,-0.01,0.07,2.99,1.02,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","CTATTGCGAGTCACCA",5,135.32,10.55,-0.21,0.04,2.88,1.05,0,">1 nonsynonymous","T15A S129V S147P",3
"lib1","SARS-CoV-2","CTATTGGCATAACTTA",7,76.96,10.35,-0.41,0.06,2.87,1.04,0,"1 nonsynonymous","N24Y",1
"lib1","SARS-CoV-2","CTATTGGCTTTTAGGA",3,30.03,9.72,-1.04,0.11,2.37,1.02,0.01,">1 nonsynonymous","L5W F62R Q144K",3
"lib1","SARS-CoV-2","CTATTGGGCTTAGTAG",1,89.9,9.95,-0.82,0.09,1.97,1.05,0,"1 nonsynonymous","C49M",1
"lib1","SARS-CoV-2","CTATTGTACACTACAC",2,10.33,6,-4.76,0.7,1.89,1.04,0,">1 nonsynonymous","S139L R179V",2
"lib1","SARS-CoV-2","CTATTGTAGCATACCA",6,16.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7A S41W G101H",3
"lib1","SARS-CoV-2","CTATTGTCGGACGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* G146M L162R",3
"lib1","SARS-CoV-2","CTATTGTGCATAGACT",1,5.27,6,-4.76,2,3,1.27,0.05,">1 nonsynonymous","Y50T I88K L125Q",3
"lib1","SARS-CoV-2","CTATTGTTCGCTCCAA",1,47.61,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G9C S108W",2
"lib1","SARS-CoV-2","CTATTGTTGAGCACTG",1,46.77,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V11S I28K P54F C61L K128S F156I",6
"lib1","SARS-CoV-2","CTATTTAAATATTGAC",2,56.12,8.53,-2.23,0.09,2.35,1.06,0,">1 nonsynonymous","V37Q N120P K128A",3
"lib1","SARS-CoV-2","CTATTTAATATATGGT",5,99.23,10.45,-0.31,0.02,2.89,1.07,0,">1 nonsynonymous","V32K D90L",2
"lib1","SARS-CoV-2","CTATTTACATAATCTC",1,18.68,9.32,-1.45,0.19,2.65,1.13,0.02,">1 nonsynonymous","N64G T140G G155D",3
"lib1","SARS-CoV-2","CTATTTACCCTCCCTA",3,77.13,10.37,-0.4,0.06,2.93,1.01,0,">1 nonsynonymous","K87R G152L",2
"lib1","SARS-CoV-2","CTATTTACTGCGGTAT",2,5.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F70W K87P T140K Y178H",4
"lib1","SARS-CoV-2","CTATTTACTTATCTAC",2,14.4,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D97P G116L N157F",3
"lib1","SARS-CoV-2","CTATTTAGCAATCCCA",3,33.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I2Y L5I N13L D34W T55I Q144H Y165T",7
"lib1","SARS-CoV-2","CTATTTAGGGCAATTA",2,80.81,9.56,-1.21,0.14,1.9,1.08,0.01,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","CTATTTAGTAAATCAA",3,0.63,NA,NA,NA,NA,NA,NA,"stop","F12K E141* S200Y",3
"lib1","SARS-CoV-2","CTATTTAGTATCTCCT",1,32.11,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9K T63N F99M C150S",4
"lib1","SARS-CoV-2","CTATTTATAAACAGAG",11,129.06,9.97,-0.8,0.04,2.68,1.04,0,">1 nonsynonymous","Y35D C61M D90Q",3
"lib1","SARS-CoV-2","CTATTTATATTAATCC",3,45.91,6.12,-4.64,1.1,1.5,1.14,0.03,">1 nonsynonymous","C49S K87T L162Y",3
"lib1","SARS-CoV-2","CTATTTATGGTAGTAA",1,16.28,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V65W T85R P149M F167T L183A",5
"lib1","SARS-CoV-2","CTATTTATGTTTCTCT",4,68.82,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T3K D98E P177L",3
"lib1","SARS-CoV-2","CTATTTCAAAGAACAC",6,106.84,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9L N120T R124A Y143P Y178L",5
"lib1","SARS-CoV-2","CTATTTCAAAGGTCAA",2,28.57,10.41,-0.36,0.06,2.94,1.01,0,">1 nonsynonymous","Y39L K87N D97N",3
"lib1","SARS-CoV-2","CTATTTCAAATAGATA",5,60.23,10.7,-0.06,0.05,2.94,1.01,0,">1 nonsynonymous","T46L Q163I S200Y",3
"lib1","SARS-CoV-2","CTATTTCAATGTTAAC",1,25.97,7.77,-3,0.47,1.5,1,0.08,">1 nonsynonymous","F12C D68W K94Y",3
"lib1","SARS-CoV-2","CTATTTCTGACTAAAT",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T I88F",2
"lib1","SARS-CoV-2","CTATTTGAGATATAAT",1,31.11,8.64,-2.12,0.21,1.66,1.17,0.02,">1 nonsynonymous","S41Y G86M Y178H K199M",4
"lib1","SARS-CoV-2","CTATTTGCATTGCCGT",9,221.98,10.57,-0.19,0.05,2.9,1.04,0,">1 nonsynonymous","P96S L122Y",2
"lib1","SARS-CoV-2","CTATTTGGGATATAGG",2,59.5,8.93,-1.83,0.15,1.5,1.14,0.01,">1 nonsynonymous","F17S P133S T201P",3
"lib1","SARS-CoV-2","CTATTTGTACACTAAA",5,77.92,10.77,0.01,0.08,2.89,1.07,0,">1 nonsynonymous","L60Q S184T",2
"lib1","SARS-CoV-2","CTATTTGTACTTTCAA",6,23.4,9.74,-1.02,0.4,1.5,1.06,0.05,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","CTATTTGTGTCGAAAA",4,29.26,10.67,-0.1,0.07,2.98,1,0,">1 nonsynonymous","I2F T148R",2
"lib1","SARS-CoV-2","CTATTTGTTCCAAATG",14,80.64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D112C G174W",2
"lib1","SARS-CoV-2","CTATTTTAGAGATGAT",1,32.2,6,-4.76,0.71,3,1.1,0,">1 nonsynonymous","C49I D59G A67S A105F",4
"lib1","SARS-CoV-2","CTATTTTATACACATG",1,0.32,NA,NA,NA,NA,NA,NA,"stop","A14I Q84* I88S W106K",4
"lib1","SARS-CoV-2","CTATTTTCCACTCCAA",7,101.22,10.72,-0.05,0.08,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CTATTTTCGATCTGAT",1,23.39,9.02,-1.74,0.33,1.5,1,0.07,"1 nonsynonymous","L183S",1
"lib1","SARS-CoV-2","CTATTTTTACCACTAC",4,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R T46N F62C K132C S139N G174V F185H",7
"lib1","SARS-CoV-2","CTCAAAAACGAATACA",8,157.35,10.55,-0.22,0.04,2.87,1.06,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","CTCAAAAACTCCGACC",6,61.26,6,-4.76,1.55,1.5,1.21,0.03,">1 nonsynonymous","T55D G86L N151T S200E",4
"lib1","SARS-CoV-2","CTCAAAAAGAACCTCC",5,171.72,10.6,-0.16,0.05,2.9,1.06,0,"1 nonsynonymous","N30K",1
"lib1","SARS-CoV-2","CTCAAAAAGCGGAGCA",4,43.95,8.96,-1.8,0.1,2.83,1.08,0,">1 nonsynonymous","Y119M E154P",2
"lib1","SARS-CoV-2","CTCAAAAATGAATTTA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22K D68K S139R Q144L G174C",5
"lib1","SARS-CoV-2","CTCAAAACAAATTGAC",1,22.04,8.73,-2.03,0.28,2.03,1.11,0.03,">1 nonsynonymous","G83C S129I Y143V N171A",4
"lib1","SARS-CoV-2","CTCAAAACAAGCGCAA",3,6.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C49R Y93I Y143V",3
"lib1","SARS-CoV-2","CTCAAAACAGCGTTCT",1,24.73,8.51,-2.26,0.33,1.5,1.02,0.04,">1 nonsynonymous","V115H G152V V173S",3
"lib1","SARS-CoV-2","CTCAAAACAGTAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55S D98L I138* F156A",4
"lib1","SARS-CoV-2","CTCAAAACATAGACTA",1,10.37,6,-4.76,1.28,3,1.07,0,">1 nonsynonymous","L60M L95F V115I E135T G146D",5
"lib1","SARS-CoV-2","CTCAAAACCTCAGCGT",7,12.39,6.44,-4.33,0.77,1.5,1.19,0.05,">1 nonsynonymous","S45F A81M S113F",3
"lib1","SARS-CoV-2","CTCAAAACCTTGATCC",4,46.55,9.48,-1.28,0.19,1.5,1,0.02,">1 nonsynonymous","N4L G51S D75A",3
"lib1","SARS-CoV-2","CTCAAAACGAATATGC",7,30.96,6.66,-4.1,0.44,1.5,1.23,0.02,">1 nonsynonymous","G86R P149R",2
"lib1","SARS-CoV-2","CTCAAAACTCAATTAA",3,39.85,7.81,-2.95,0.51,1.5,1,0.08,">1 nonsynonymous","C6G G155V T170P",3
"lib1","SARS-CoV-2","CTCAAAACTCAGCCGT",2,10.39,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","T15F G83E A89H Y165R Y178G S184T",6
"lib1","SARS-CoV-2","CTCAAAACTTCTCTAT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","F44A Y165* K198D",3
"lib1","SARS-CoV-2","CTCAAAAGAAAATAAT",3,37.05,10.77,0,0.07,2.92,1,0,">1 nonsynonymous","S53P T201M",2
"lib1","SARS-CoV-2","CTCAAAAGAACGATTG",3,133.32,10.06,-0.7,0.05,2.85,1.03,0,">1 nonsynonymous","L125S T140I P149N",3
"lib1","SARS-CoV-2","CTCAAAAGATTATACT",4,16.41,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5K A14M F44S V52Y G146S P149R F167N",7
"lib1","SARS-CoV-2","CTCAAAAGGGCACCAG",8,2.58,NA,NA,NA,NA,NA,NA,"stop","D90P Y159I K198*",3
"lib1","SARS-CoV-2","CTCAAAAGGGCCAAGG",7,70.85,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","C6M L95Q F99S V103T K198T",5
"lib1","SARS-CoV-2","CTCAAAATAAATGGAA",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S R27L D34G D97Y F134T I142H V173R",7
"lib1","SARS-CoV-2","CTCAAAATAACTCTTT",5,54.84,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V37F C49T N107C R127M",4
"lib1","SARS-CoV-2","CTCAAAATGCCATATA",1,34.53,10.62,-0.15,0.11,2.82,1.08,0.01,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","CTCAAACAAGATAGTT",7,77.84,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","V37L F99Q Y119P",3
"lib1","SARS-CoV-2","CTCAAACAATTGTAGA",3,34.7,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44A I72D T85M D112I",4
"lib1","SARS-CoV-2","CTCAAACATATACTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6K D34Y S41R N107Y G116L S139* T148S",7
"lib1","SARS-CoV-2","CTCAAACATGTCCATT",6,45.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2F P7R S41R S69M T100V E141S G155V L183N",8
"lib1","SARS-CoV-2","CTCAAACCAACGACAA",2,74.48,10.19,-0.57,0.1,2.5,1.04,0,">1 nonsynonymous","P7Y V37R Y123V",3
"lib1","SARS-CoV-2","CTCAAACCCTAGCAAG",1,1.23,NA,NA,NA,NA,NA,NA,"stop","L5I Y21*",2
"lib1","SARS-CoV-2","CTCAAACCGAGATCCA",3,0.78,NA,NA,NA,NA,NA,NA,"stop","C6V F44* N92V C150K Y165I",5
"lib1","SARS-CoV-2","CTCAAACGATAAAAAC",7,129.54,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A81K Q163L G172C",3
"lib1","SARS-CoV-2","CTCAAACGTCCCCACT",2,27.58,7.15,-3.61,0.46,1.5,1.14,0.06,">1 nonsynonymous","Y93S V103G L122D P133D",4
"lib1","SARS-CoV-2","CTCAAACTATTTAGTC",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C V103M",2
"lib1","SARS-CoV-2","CTCAAACTCATTCCAC",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95E L183G",2
"lib1","SARS-CoV-2","CTCAAACTTAAAATCC",2,66.18,8.36,-2.4,0.09,2.44,1.11,0,">1 nonsynonymous","N157V V173L",2
"lib1","SARS-CoV-2","CTCAAAGAGCTGTGCA",7,0.63,NA,NA,NA,NA,NA,NA,"stop","E10* S53M C61W G86L L122M P149H",6
"lib1","SARS-CoV-2","CTCAAAGAGTTACATA",1,15.37,10.99,0.23,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCAAAGCCACAATTA",2,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R C49S C61I G86L V182H",5
"lib1","SARS-CoV-2","CTCAAAGCGTACAATC",4,42.04,10.7,-0.06,0.09,2.95,1.03,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","CTCAAAGGATTCCCTA",1,44.65,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","Y159S",1
"lib1","SARS-CoV-2","CTCAAAGTTCGGATCA",5,31.22,8.68,-2.08,0.16,2.05,1.01,0.01,">1 nonsynonymous","G86T S129G",2
"lib1","SARS-CoV-2","CTCAAATAAACACAGG",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T G146R P197K",3
"lib1","SARS-CoV-2","CTCAAATAGCAACATA",1,66.88,10.37,-0.4,0.06,2.94,1.03,0,">1 nonsynonymous","G83C I104V",2
"lib1","SARS-CoV-2","CTCAAATCTATCAAAG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","F47I Y165T K198*",3
"lib1","SARS-CoV-2","CTCAAATGTAGGAATC",3,80.07,9.95,-0.81,0.12,2.02,1.06,0.01,">1 nonsynonymous","T15S N58T S108V",3
"lib1","SARS-CoV-2","CTCAAATTAACTCATT",1,9.68,9.94,-0.83,0.14,2.37,1.01,0.01,">1 nonsynonymous","L57K I104V",2
"lib1","SARS-CoV-2","CTCAAATTGCTAATGG",2,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M S41N F62S D68P Y143A G155L L162W",7
"lib1","SARS-CoV-2","CTCAAATTTATAACTA",2,9.65,6,-4.76,2,3,1.14,0,">1 nonsynonymous","K94V F99H V103S V173T Q176Y",5
"lib1","SARS-CoV-2","CTCAACAAACTGGCCA",5,0.8,NA,NA,NA,NA,NA,NA,"stop","F8G Y50T A105* T140G",4
"lib1","SARS-CoV-2","CTCAACAAACTTCATG",1,26.56,9.56,-1.21,0.14,2.29,1.06,0.01,">1 nonsynonymous","N1K F12I A22T K87S",4
"lib1","SARS-CoV-2","CTCAACAAATTAACAT",1,9.93,10.69,-0.08,0.09,3,1,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","CTCAACAATCAAGAAC",4,40.87,9.22,-1.54,0.19,1.71,1.19,0.02,">1 nonsynonymous","A14F Q144R",2
"lib1","SARS-CoV-2","CTCAACACAAACATCA",8,1.29,NA,NA,NA,NA,NA,NA,"stop","Y143* T170M",2
"lib1","SARS-CoV-2","CTCAACACCAATTCAA",3,33.85,10.73,-0.03,0.11,2.87,1.08,0.01,">1 nonsynonymous","N64Y S164R A190D",3
"lib1","SARS-CoV-2","CTCAACACCACTCACC",1,5.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K87D V103N T201H",3
"lib1","SARS-CoV-2","CTCAACACCCACAAAA",3,6.8,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S45K L95K W106F G146V G172Q",5
"lib1","SARS-CoV-2","CTCAACACTTTAAAGA",3,15.91,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F70L G86N A105T A190E",4
"lib1","SARS-CoV-2","CTCAACAGGAGAATCC",1,24.97,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L5W S43R D68L T85A F126P R127H T201E",7
"lib1","SARS-CoV-2","CTCAACAGGTTTGAGG",1,17.37,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","I2A Y119T R127P",3
"lib1","SARS-CoV-2","CTCAACAGTGGCCTAT",1,5.96,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","L5H P54S G74K A105Y Y123H",5
"lib1","SARS-CoV-2","CTCAACCCGGTCCCGA",3,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V20C T85P A105K",4
"lib1","SARS-CoV-2","CTCAACCGTCATTATC",5,55.89,10.74,-0.02,0.07,2.93,1.04,0,">1 nonsynonymous","N58Q T85K",2
"lib1","SARS-CoV-2","CTCAACGACTTAGCAC",1,3.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","CTCAACGCTAATGCCA",6,95.07,10.29,-0.47,0.07,2.87,1.03,0,">1 nonsynonymous","S43R T100D L122N",3
"lib1","SARS-CoV-2","CTCAACGGGAGCTTTA",1,14.18,10.6,-0.17,0.09,2.97,1,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","CTCAACGTTTACCTAA",3,7.23,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","L38C G101N S129R",3
"lib1","SARS-CoV-2","CTCAACTAAAACTGAG",3,10.41,10.76,-0.01,0.13,2.88,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTCAACTAACATGAAG",5,30.92,9.63,-1.13,0.08,2.88,1.05,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","CTCAACTAATTCTTGT",3,35.07,6.74,-4.02,0.53,1.5,1.19,0.06,">1 nonsynonymous","T3S E10T N30T F185C",4
"lib1","SARS-CoV-2","CTCAACTACTTTCTTA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S G86A T100V",3
"lib1","SARS-CoV-2","CTCAACTCATGCACTT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52N K87V S164V",3
"lib1","SARS-CoV-2","CTCAACTCGAAACATT",5,90.99,10.85,0.09,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCAACTGGCAAAACC",10,56.4,8.37,-2.39,0.38,1.5,1,0.06,">1 nonsynonymous","S43P C49Y S113T G117Q",4
"lib1","SARS-CoV-2","CTCAACTTAAAAGACG",3,3.51,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTCAACTTAGTTAACT",11,3.8,NA,NA,NA,NA,NA,NA,"stop","T100S F167*",2
"lib1","SARS-CoV-2","CTCAACTTTAGAATAT",3,46.12,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G74T G101S N157L V173K R179T",5
"lib1","SARS-CoV-2","CTCAAGAAACGGGTAA",4,56.02,10.87,0.1,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCAAGATTGGCTAAA",9,4004.64,10.75,-0.01,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCAAGCACAATGTCA",4,34.9,10.77,0.01,0.09,2.84,1.07,0,">1 nonsynonymous","E141N T201I",2
"lib1","SARS-CoV-2","CTCAAGCAGTTACCGC",3,1.31,NA,NA,NA,NA,NA,NA,"stop","K48Q K56P I88W N92* L122S",5
"lib1","SARS-CoV-2","CTCAAGCTGTAAAAAT",8,0.65,NA,NA,NA,NA,NA,NA,"stop","E10G V20W R25* K48M T55K W106R",6
"lib1","SARS-CoV-2","CTCAAGGCCTTGAATG",3,8.95,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D97F G101V T140R",3
"lib1","SARS-CoV-2","CTCAAGGCTCAGTTAA",7,64.08,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C49D G166F",2
"lib1","SARS-CoV-2","CTCAAGTAAACGCTGC",2,38,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S69M N118V F160L V181T",4
"lib1","SARS-CoV-2","CTCAAGTACCTGCAGA",7,207.89,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35V T100I G155C Y165W V173D",5
"lib1","SARS-CoV-2","CTCAAGTGCGTGCCCG",5,3.17,NA,NA,NA,NA,NA,NA,"stop","A33I F44L K56F R73S A89T Y93Q W106* F156L P169H",9
"lib1","SARS-CoV-2","CTCAAGTGGACCGAAG",5,2.16,NA,NA,NA,NA,NA,NA,"stop","P169* G174D",2
"lib1","SARS-CoV-2","CTCAAGTGGCCATATT",14,165.41,9.21,-1.56,0.07,2.82,1.12,0,">1 nonsynonymous","S129V N157G",2
"lib1","SARS-CoV-2","CTCAAGTTAAGAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56G P82* Y119D G172Y",4
"lib1","SARS-CoV-2","CTCAATAAAAAAGTGT",2,84.58,10.64,-0.13,0.03,2.9,1.06,0,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","CTCAATAAACACATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A22* N107L I138S",3
"lib1","SARS-CoV-2","CTCAATACATACAACC",3,109.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R27S C49N N58I K132R N151K V173S P177E T201R",8
"lib1","SARS-CoV-2","CTCAATACCTCAATAA",1,22.28,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V71N W106L T201Q",3
"lib1","SARS-CoV-2","CTCAATATATTACCAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","D68T Q84* G86D I138L G172M",5
"lib1","SARS-CoV-2","CTCAATATCCAAGACA",5,27.45,8.55,-2.22,0.14,2.07,1.11,0.01,">1 nonsynonymous","F44L N118F I138L S147K V173K",5
"lib1","SARS-CoV-2","CTCAATCAATGAATAC",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N L125S",2
"lib1","SARS-CoV-2","CTCAATCACTATCTTT",10,211.88,10.72,-0.04,0.06,2.88,1.06,0,">1 nonsynonymous","A190V K198M",2
"lib1","SARS-CoV-2","CTCAATCCTTGCCCAA",7,38.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W106G S113F",2
"lib1","SARS-CoV-2","CTCAATCTACCCAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K87S N130P P149R N171Y L183*",5
"lib1","SARS-CoV-2","CTCAATCTAGCCTGAG",3,19.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43V N120I P161H",3
"lib1","SARS-CoV-2","CTCAATCTATTGTCAA",1,29.52,10.54,-0.22,0.08,2.86,1,0,">1 nonsynonymous","R27A A42V E141S",3
"lib1","SARS-CoV-2","CTCAATCTGAAGCGGG",1,40.62,10.61,-0.16,0.12,2.81,1.14,0.01,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","CTCAATCTTAGACGTA",2,33.42,9.63,-1.13,0.24,1.53,1.02,0.03,">1 nonsynonymous","Y35E Y178S",2
"lib1","SARS-CoV-2","CTCAATGATTTCCGTT",1,9.79,9.89,-0.87,0.15,2.7,1.06,0.01,">1 nonsynonymous","L5E T100K G155V",3
"lib1","SARS-CoV-2","CTCAATTCCTAACTAA",1,4.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","CTCAATTGAAATCGCA",4,12.03,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1R T55I Q84P D98E Y143C",5
"lib1","SARS-CoV-2","CTCAATTGACTGTGGC",1,8.73,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","P96V F134P V182T",3
"lib1","SARS-CoV-2","CTCAATTGCGAATTGA",6,6.53,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13I A33D L95H R136V",4
"lib1","SARS-CoV-2","CTCAATTGCGTAACCA",7,122.78,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D112S Y159F",2
"lib1","SARS-CoV-2","CTCACAAAACAATACA",5,27.8,6,-4.76,2,3,1.15,0,">1 nonsynonymous","R27L F44T D90Y F156S P169F",5
"lib1","SARS-CoV-2","CTCACAAAGCACAGTA",2,78.44,8.42,-2.34,0.13,2.4,1.08,0.01,">1 nonsynonymous","A81C N157A",2
"lib1","SARS-CoV-2","CTCACAAATATGGGAG",2,62.41,9.85,-0.92,0.11,2.55,1,0,">1 nonsynonymous","L57T F62L G116R",3
"lib1","SARS-CoV-2","CTCACAACCTTTTGCC",6,6.21,NA,NA,NA,NA,NA,NA,"stop","V32L F44* Y165K R179M",4
"lib1","SARS-CoV-2","CTCACAACTAAGATAG",4,103.43,6,-4.76,1.12,1.5,1.17,0.01,">1 nonsynonymous","Y35R K48L G166E",3
"lib1","SARS-CoV-2","CTCACAACTTAAGAAG",4,45.05,9.73,-1.04,0.15,2.1,1.1,0.01,">1 nonsynonymous","A14N V65H",2
"lib1","SARS-CoV-2","CTCACAACTTTAACAA",8,37.69,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9L D34I Q79T",3
"lib1","SARS-CoV-2","CTCACAATAGAACCCT",2,67.77,10.74,-0.03,0.08,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCACAATCACTGTGT",6,145.62,6.02,-4.74,0.61,1.5,1.17,0.01,">1 nonsynonymous","L95M N157P",2
"lib1","SARS-CoV-2","CTCACAATGAAGATAG",6,17.47,6.32,-4.44,0.79,1.5,1.1,0.05,">1 nonsynonymous","D68V G152Y",2
"lib1","SARS-CoV-2","CTCACACACGTATAAC",8,68.24,6.49,-4.27,0.65,1.5,1.14,0.05,">1 nonsynonymous","D90C V103L",2
"lib1","SARS-CoV-2","CTCACACATGTTGTCA",1,11.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19I S41D K114R N120L S129N V181M",6
"lib1","SARS-CoV-2","CTCACACCTCCCTTAC",1,96.62,10.18,-0.58,0.08,2.48,1.03,0,"1 nonsynonymous","A67S",1
"lib1","SARS-CoV-2","CTCACACCTTACGAAA",3,37.41,10.39,-0.37,0.07,2.79,1.01,0,">1 nonsynonymous","V52T S53T K132Y",3
"lib1","SARS-CoV-2","CTCACACGACTAATAA",5,0.35,NA,NA,NA,NA,NA,NA,"stop","R27* L57N E135S C150D",4
"lib1","SARS-CoV-2","CTCACACGGGCTTAAG",3,23.49,8.34,-2.42,0.32,1.5,1.21,0.07,">1 nonsynonymous","Y50N N120L F185Q",3
"lib1","SARS-CoV-2","CTCACACTGAATATAG",5,29.55,9.46,-1.3,0.22,1.76,1.11,0.02,">1 nonsynonymous","I80L I88L",2
"lib1","SARS-CoV-2","CTCACACTTGTCAATT",3,0.53,NA,NA,NA,NA,NA,NA,"stop","N13F F44P N58F N64Y L95* S139I F185L",7
"lib1","SARS-CoV-2","CTCACAGACAATCCAA",6,39.29,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S19L P96Q",2
"lib1","SARS-CoV-2","CTCACAGGTACAATAC",3,96.21,10.67,-0.09,0.08,2.71,1,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","CTCACATACACTAACC",6,61.3,10.6,-0.16,0.05,2.95,1.01,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","CTCACATACGTACAAT",2,58.61,9.97,-0.79,0.1,2.61,1.03,0,">1 nonsynonymous","T3Q G83V",2
"lib1","SARS-CoV-2","CTCACATAGTTCCTGC",19,54.62,6,-4.76,2,1.5,1.3,0.04,"1 nonsynonymous","C102R",1
"lib1","SARS-CoV-2","CTCACATATGATACAT",3,90.21,6.2,-4.57,0.93,1.5,1.18,0.04,">1 nonsynonymous","E10M Y35S F99G K128I",4
"lib1","SARS-CoV-2","CTCACATCAAAATTCC",2,23.51,10.89,0.13,0.1,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCACATCAAGAAAAT",8,190.23,9.77,-0.99,0.07,1.99,1.07,0,">1 nonsynonymous","A14D S36I V173G P197T",4
"lib1","SARS-CoV-2","CTCACATCCACCTCAA",5,9.4,6,-4.76,2,3,1.06,0,">1 nonsynonymous","D59G F99M V182T",3
"lib1","SARS-CoV-2","CTCACATGCCACCTAC",4,55.24,10.06,-0.7,0.09,2.7,1.05,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","CTCACATTAAGATGCT",2,40.18,10.19,-0.58,0.07,2.73,1.02,0,">1 nonsynonymous","A81S D90Y L122Y",3
"lib1","SARS-CoV-2","CTCACCAAATGCTATT",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113M N157S V182M",3
"lib1","SARS-CoV-2","CTCACCAACAAACTCT",2,32.09,8.61,-2.16,0.26,2.16,1.2,0.03,">1 nonsynonymous","P7A G117P P149F",3
"lib1","SARS-CoV-2","CTCACCAAGCCAACGC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","V52I Y91I K114N V153* S164R L187K",6
"lib1","SARS-CoV-2","CTCACCAATGACACAC",1,40.07,8.94,-1.83,0.28,1.5,1.04,0.03,">1 nonsynonymous","R16F Y66S D98I I142M",4
"lib1","SARS-CoV-2","CTCACCAATTAAACCA",2,31.44,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V11M N110S V153P C158I",4
"lib1","SARS-CoV-2","CTCACCAGAAATCATG",2,31.62,9.92,-0.84,0.12,2.58,1.02,0,">1 nonsynonymous","T15S C31E D59A",3
"lib1","SARS-CoV-2","CTCACCAGGTGAATTA",2,29.62,10.52,-0.25,0.04,2.93,1.02,0,">1 nonsynonymous","T63V D98T",2
"lib1","SARS-CoV-2","CTCACCATAGTGCTGT",3,18.83,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N40K D68E G101V R124C F167L",5
"lib1","SARS-CoV-2","CTCACCCAAAAGTACG",7,46.07,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","T55V I88V V115M R179V T201S",5
"lib1","SARS-CoV-2","CTCACCCACAGACGAG",1,13.78,9.43,-1.34,0.49,2.25,1.11,0.08,">1 nonsynonymous","R16C T85M S129A V173A",4
"lib1","SARS-CoV-2","CTCACCCACCGTCCGA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","CTCACCCAGCTGTTGA",5,65.17,10.21,-0.56,0.06,2.73,1,0,">1 nonsynonymous","W106F T140L K199C",3
"lib1","SARS-CoV-2","CTCACCCAGTTCATAG",4,36.43,10.78,0.02,0.09,2.8,1.16,0,"1 nonsynonymous","V37T",1
"lib1","SARS-CoV-2","CTCACCCATCAACTAG",7,32.23,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C31R L131Q T201S",3
"lib1","SARS-CoV-2","CTCACCCATGTAGTAG",5,48.37,9.45,-1.31,0.15,1.59,1.1,0.01,">1 nonsynonymous","T3V R127S E141Y",3
"lib1","SARS-CoV-2","CTCACCCCACAAATTA",6,8.7,NA,NA,NA,NA,NA,NA,"stop","V11T D68* L122G G146K",4
"lib1","SARS-CoV-2","CTCACCCCAGCGTCCA",2,28.05,7.59,-3.18,0.24,1.5,1.09,0.02,">1 nonsynonymous","Y50Q S139E C195I",3
"lib1","SARS-CoV-2","CTCACCCCCCAACTTT",1,19.74,6,-4.76,0.89,3,1.09,0.01,">1 nonsynonymous","S41W T100N R127I",3
"lib1","SARS-CoV-2","CTCACCGAAAACATCT",8,90.44,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D98I P177F S200M",3
"lib1","SARS-CoV-2","CTCACCGATACGCTAG",2,59.52,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","F167D",1
"lib1","SARS-CoV-2","CTCACCGGCCGAAAAA",5,65.2,10.82,0.06,0.06,2.95,1.02,0,"1 nonsynonymous","S200G",1
"lib1","SARS-CoV-2","CTCACCGGCGACAGTA",5,30.66,6.13,-4.64,1.03,1.5,1.26,0.03,">1 nonsynonymous","F8S L60F Y119N",3
"lib1","SARS-CoV-2","CTCACCTATAAGGGCA",4,1.83,NA,NA,NA,NA,NA,NA,"stop","F44N S113* A145N",3
"lib1","SARS-CoV-2","CTCACGAACCTCATCC",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47G D90L F99V P197S",4
"lib1","SARS-CoV-2","CTCACGAATACAATAA",9,181.78,10.23,-0.54,0.04,2.91,1.01,0,">1 nonsynonymous","C6F T201G",2
"lib1","SARS-CoV-2","CTCACGACCCATACAT",4,42.23,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","K48W G51V",2
"lib1","SARS-CoV-2","CTCACGACGAAGCTCA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","S43* D90G G101S N107S",4
"lib1","SARS-CoV-2","CTCACGATATATTTTT",1,74.51,9.7,-1.07,0.08,2.59,1.07,0,">1 nonsynonymous","K48Y A145T",2
"lib1","SARS-CoV-2","CTCACGATGATAAACA",2,51.95,9.84,-0.93,0.05,2.93,1.01,0,">1 nonsynonymous","T55R N118S",2
"lib1","SARS-CoV-2","CTCACGCAGAGCTTGA",1,6.92,6.16,-4.61,1.51,1.5,1.4,0.06,">1 nonsynonymous","I28P K87A",2
"lib1","SARS-CoV-2","CTCACGCATCAGAAAA",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C K48E V65N A145V C158R",5
"lib1","SARS-CoV-2","CTCACGCCAGCCAAAT",4,36.48,6.26,-4.5,0.38,1.5,1.14,0.01,">1 nonsynonymous","C6M Q176S G196S T201R",4
"lib1","SARS-CoV-2","CTCACGCGAAACATGA",1,8.74,6,-4.76,1.9,3,1.03,0.01,">1 nonsynonymous","G9A F44Y G86I N130I E141S",5
"lib1","SARS-CoV-2","CTCACGCGACCTGCCA",6,50.15,6.13,-4.63,1,1.5,1.33,0.03,">1 nonsynonymous","I2S T46A C61H A105N G146T",5
"lib1","SARS-CoV-2","CTCACGCTTATTGACG",3,93.98,9.22,-1.54,0.12,2.43,1.13,0.01,">1 nonsynonymous","S139I G174M",2
"lib1","SARS-CoV-2","CTCACGGAATACGCCC",2,8.39,10.07,-0.7,0.21,2.2,1,0.01,"1 nonsynonymous","P96M",1
"lib1","SARS-CoV-2","CTCACGGCGACACCGT",10,376.9,10.81,0.05,0.06,2.92,1.04,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","CTCACGGTCAGCATAG",2,31.15,8.42,-2.35,0.12,2.89,1.08,0.01,"1 nonsynonymous","Y175C",1
"lib1","SARS-CoV-2","CTCACGGTGATAGTGA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","T3M N30E S45L S69V E76*",5
"lib1","SARS-CoV-2","CTCACGTACTACTAAA",2,31.37,10.11,-0.66,0.12,2.54,1.08,0.01,"1 nonsynonymous","T100G",1
"lib1","SARS-CoV-2","CTCACGTTGTTGACGG",1,21.42,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G9F R16M D34W K48Y Y66H D112V P149Q",7
"lib1","SARS-CoV-2","CTCACGTTTTGGTCAA",3,76.54,10.69,-0.07,0.06,2.89,1.07,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","CTCACTAAAATGGAAA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","Y35N F62* D98Q E141A P149E",5
"lib1","SARS-CoV-2","CTCACTAAATTGATCA",9,171.53,10.55,-0.21,0.04,2.9,1,0,">1 nonsynonymous","D59L Q84T",2
"lib1","SARS-CoV-2","CTCACTACCCAAACAA",1,60.16,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y91T A105S G155E Y175G",4
"lib1","SARS-CoV-2","CTCACTACCTATTGCC",3,30.97,10.05,-0.72,0.1,2.81,1,0,">1 nonsynonymous","N13S Y123S",2
"lib1","SARS-CoV-2","CTCACTACTGTAGCAA",5,174.67,10.44,-0.32,0.04,2.9,1.03,0,"1 nonsynonymous","A81C",1
"lib1","SARS-CoV-2","CTCACTATATAGATTC",3,10.68,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","E10H V37I S41R I104E Q168K",5
"lib1","SARS-CoV-2","CTCACTATTAACCAAT",3,109.17,7.6,-3.17,0.12,1.5,1.09,0,">1 nonsynonymous","G83K C150N K199S",3
"lib1","SARS-CoV-2","CTCACTCAAAACTAAA",4,12.91,6,-4.76,0.71,3,1.03,0,"1 nonsynonymous","R124D",1
"lib1","SARS-CoV-2","CTCACTCGTTTAAAAA",2,7.38,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6E K94W R127S",3
"lib1","SARS-CoV-2","CTCACTGAAAGGTGAA",1,48.91,10.1,-0.66,0.06,2.71,1.02,0,">1 nonsynonymous","S36T K56P",2
"lib1","SARS-CoV-2","CTCACTGCGAACCCAG",5,46.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10T Y35D P54N K94M I142R",5
"lib1","SARS-CoV-2","CTCACTGTACGAAAAT",3,32.38,6,-4.76,2,3,1.17,0,">1 nonsynonymous","K48L G83S D98N Y178P",4
"lib1","SARS-CoV-2","CTCACTGTTATGCTTA",4,72.17,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A42G G86W Y119V N130S Q168R",5
"lib1","SARS-CoV-2","CTCACTGTTCTAAACA",3,18.22,8.63,-2.14,0.12,2.81,1.11,0.01,">1 nonsynonymous","K26F Y119L",2
"lib1","SARS-CoV-2","CTCACTGTTTGATGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L D98N T201Y",3
"lib1","SARS-CoV-2","CTCACTTAAAACCGAT",2,13.82,10.71,-0.05,0.07,2.98,1,0,">1 nonsynonymous","I2S D97F",2
"lib1","SARS-CoV-2","CTCACTTAAGAAACGT",7,99.55,10.66,-0.1,0.05,2.94,1.03,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","CTCACTTATAATTTGG",2,44.99,10.59,-0.17,0.08,2.77,1.14,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCACTTCCGAGCTTG",10,253,10.74,-0.02,0.06,2.88,1.07,0,"1 nonsynonymous","Y66V",1
"lib1","SARS-CoV-2","CTCACTTCTTAACCTG",3,37.22,8.37,-2.4,0.11,1.99,1.08,0.01,">1 nonsynonymous","A42S K56P W106T E141Y G174D",5
"lib1","SARS-CoV-2","CTCACTTTTTAAACAT",2,74.55,10.74,-0.03,0.04,2.9,1.05,0,">1 nonsynonymous","N1E P54M P197A",3
"lib1","SARS-CoV-2","CTCAGAAACCCCAACA",2,41.59,10.6,-0.16,0.06,2.87,1.04,0,">1 nonsynonymous","L60M D97I N120S T148L",4
"lib1","SARS-CoV-2","CTCAGAAGAATTAGTT",1,22.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R25L G83S",2
"lib1","SARS-CoV-2","CTCAGAAGGACCCGTT",3,20.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42V P82A R136V",3
"lib1","SARS-CoV-2","CTCAGAATCGATGGGA",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132S G174S",2
"lib1","SARS-CoV-2","CTCAGAATCTAGTCGA",6,96.56,10.84,0.07,0.07,2.93,1.05,0,"1 nonsynonymous","A33W",1
"lib1","SARS-CoV-2","CTCAGAATTTCTCTCG",1,18.07,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","L5N A33H R179F",3
"lib1","SARS-CoV-2","CTCAGACACATATTAC",1,7.92,6.07,-4.7,0.57,3,1.09,0.01,">1 nonsynonymous","V37G T55G N92C K132C T201A",5
"lib1","SARS-CoV-2","CTCAGACCCAATAGTT",12,44.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A33G S41C K56G G101T Q144C P149Q",6
"lib1","SARS-CoV-2","CTCAGACTTACCATAA",2,28.6,10.69,-0.08,0.06,2.94,1.03,0,">1 nonsynonymous","G9R G51R",2
"lib1","SARS-CoV-2","CTCAGACTTATTATAT",7,1.88,NA,NA,NA,NA,NA,NA,"stop","V37* K48N N92V N107Y K114T",5
"lib1","SARS-CoV-2","CTCAGACTTTAGGATA",2,62.81,10.64,-0.12,0.05,2.94,1.03,0,">1 nonsynonymous","I2V L60H",2
"lib1","SARS-CoV-2","CTCAGACTTTGCGTCC",1,6.83,6.45,-4.31,0.49,2.17,1.27,0.02,">1 nonsynonymous","Y35L S41N I88N",3
"lib1","SARS-CoV-2","CTCAGAGACCCTAAAC",12,199.73,9.46,-1.3,0.08,2.54,1.1,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","CTCAGATACATGTACT",3,74.15,10.89,0.12,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCAGATCATAACAAG",2,41.25,9.3,-1.46,0.1,2.89,1.06,0,">1 nonsynonymous","Y119I T148Q V173I",3
"lib1","SARS-CoV-2","CTCAGATGACCACTTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L S139A P149F",3
"lib1","SARS-CoV-2","CTCAGATGACCCCACA",1,36.77,9.09,-1.68,0.19,1.75,1.14,0.01,">1 nonsynonymous","S36D R127L",2
"lib1","SARS-CoV-2","CTCAGATGATCAACAA",1,5.55,10.87,0.11,0.12,2.92,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTCAGATTAATGGTAA",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q I104C Q144M",3
"lib1","SARS-CoV-2","CTCAGCAAAAAGCAAA",6,68.74,10.08,-0.68,0.1,2.26,1,0,"1 nonsynonymous","Y50I",1
"lib1","SARS-CoV-2","CTCAGCAGATCAACTA",3,49.95,10.82,0.06,0.06,2.96,1.01,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","CTCAGCAGGAAATCAG",3,19,6.01,-4.75,1.09,1.5,1.13,0.02,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","CTCAGCAGTTCTAGTA",4,43.97,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A33R T55F I104T K114W I142E",5
"lib1","SARS-CoV-2","CTCAGCATGCACCCAC",1,18.84,9.57,-1.2,0.15,1.97,1.16,0.01,">1 nonsynonymous","N13T R136S",2
"lib1","SARS-CoV-2","CTCAGCCAGTTGTGCC",3,18.81,9.97,-0.8,0.09,2.17,1,0,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","CTCAGCGACGAAATGT",3,30.82,6,-4.76,1.44,3,1.14,0,">1 nonsynonymous","A22P S43G Q176K",3
"lib1","SARS-CoV-2","CTCAGCTAATTATTTA",2,6.29,10.75,-0.01,0.2,2.97,1.04,0.02,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","CTCAGCTACCCTACCT",7,1.48,NA,NA,NA,NA,NA,NA,"stop","N13V S41* A81R Y121M P149Q V181P",6
"lib1","SARS-CoV-2","CTCAGCTCTTCGAATC",2,955.38,10.74,-0.02,0.04,2.93,1.04,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","CTCAGGAAAATAAAAA",2,55.23,10.09,-0.67,0.11,2.59,1.05,0.01,">1 nonsynonymous","S19A F160D",2
"lib1","SARS-CoV-2","CTCAGGAACGAGTCAT",3,59.68,10.77,0,0.04,2.93,1.03,0,">1 nonsynonymous","T100I T148N T201V",3
"lib1","SARS-CoV-2","CTCAGGAATGAAGCAG",9,98.59,10.07,-0.7,0.1,2.25,1,0,">1 nonsynonymous","N4P D34I",2
"lib1","SARS-CoV-2","CTCAGGACGAAGTATG",3,4.05,NA,NA,NA,NA,NA,NA,"stop","V20M F70T N92W D112* Y119L",5
"lib1","SARS-CoV-2","CTCAGGACTGGGGCAG",6,6.58,10.61,-0.15,0.19,2.64,1.03,0.01,">1 nonsynonymous","R127A I142K N157V P197S",4
"lib1","SARS-CoV-2","CTCAGGATAGCAGACG",4,66.95,9.06,-1.71,0.08,2.82,1.14,0,"1 nonsynonymous","N157A",1
"lib1","SARS-CoV-2","CTCAGGATTCCATCAC",6,82.49,8.06,-2.71,0.17,1.5,1.12,0.01,"1 nonsynonymous","R127E",1
"lib1","SARS-CoV-2","CTCAGGCAATAAGTTA",4,16.38,6.44,-4.32,0.39,3,1.15,0.01,">1 nonsynonymous","K94F N107Y V115Y",3
"lib1","SARS-CoV-2","CTCAGGCACATACTGT",1,21.22,6,-4.76,0.59,3,1.08,0,">1 nonsynonymous","N107G P133A F156L R179Y",4
"lib1","SARS-CoV-2","CTCAGGCATCTCTTTG",4,54.66,6.08,-4.68,0.98,1.5,1.16,0.02,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","CTCAGGGAAAATAAGA",3,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q L38A K132R K198P",4
"lib1","SARS-CoV-2","CTCAGGTATGCGAGAA",13,270.69,10.24,-0.52,0.03,2.8,1.02,0,">1 nonsynonymous","F8L A14G D97S",3
"lib1","SARS-CoV-2","CTCAGGTGCAGCACGT",13,131.7,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","L60T E141K N151W L162G",4
"lib1","SARS-CoV-2","CTCAGTAACTGATAGG",4,1.14,NA,NA,NA,NA,NA,NA,"stop","V37W V115*",2
"lib1","SARS-CoV-2","CTCAGTAATAGGTAAG",3,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58P Y91I F160A G166Y H189Y",5
"lib1","SARS-CoV-2","CTCAGTATGTGGCCTA",19,231.05,9.88,-0.89,0.08,2.11,1.05,0,"1 nonsynonymous","K94F",1
"lib1","SARS-CoV-2","CTCAGTCAGGAGGTCT",2,43.43,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D34G L95P",2
"lib1","SARS-CoV-2","CTCAGTCGATAGAGTA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","A18* G146E",2
"lib1","SARS-CoV-2","CTCAGTGATCTTAAAA",13,25.23,6.76,-4,0.5,1.5,1.14,0.06,">1 nonsynonymous","A33R D59H I88M I104V",4
"lib1","SARS-CoV-2","CTCAGTGATGTATGAT",2,12.05,9.57,-1.19,0.28,1.99,1.01,0.04,">1 nonsynonymous","L5M V11M D34H L60H",4
"lib1","SARS-CoV-2","CTCAGTTATCACCAAC",4,22.68,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","C61Q G86F W106L Y121S",4
"lib1","SARS-CoV-2","CTCAGTTCGTTCGAGT",1,106.47,7.54,-3.22,0.29,1.5,1.16,0.02,">1 nonsynonymous","N120L L162R",2
"lib1","SARS-CoV-2","CTCAGTTGTCTATATG",2,22.47,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","A81Q S139L R179S",3
"lib1","SARS-CoV-2","CTCATAAAAGAAATTC",1,14.5,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","K94V C158Q",2
"lib1","SARS-CoV-2","CTCATAAACAAAAAAA",2,32.9,10.58,-0.18,0.08,2.85,1.09,0,"1 nonsynonymous","P149Y",1
"lib1","SARS-CoV-2","CTCATAAAGAGGGCCA",2,71.73,10.22,-0.55,0.07,2.68,1,0,">1 nonsynonymous","A42F L57Y",2
"lib1","SARS-CoV-2","CTCATAACCGCCCTGA",1,49.69,10.78,0.02,0.09,2.88,1.1,0,">1 nonsynonymous","S129E N151L T201V",3
"lib1","SARS-CoV-2","CTCATAACGCTTACAC",2,10.33,8.9,-1.86,0.17,1.67,1.1,0.01,">1 nonsynonymous","F12L V115L S129F R136L",4
"lib1","SARS-CoV-2","CTCATAACGTAAAGTG",13,102.1,7.8,-2.96,0.24,1.5,1.12,0.02,">1 nonsynonymous","F47K G117Y",2
"lib1","SARS-CoV-2","CTCATAAGAATTCTTA",7,0.08,NA,NA,NA,NA,NA,NA,"stop","T15* T201L",2
"lib1","SARS-CoV-2","CTCATAAGCACGCTAA",10,108.52,9.53,-1.23,0.09,2.54,1.12,0,">1 nonsynonymous","T3V F44W I142K",3
"lib1","SARS-CoV-2","CTCATAAGGCATATAA",9,55.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V103I R124K P177A",3
"lib1","SARS-CoV-2","CTCATAAGGTCAACGG",2,28.86,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P7H F12H L60V N157I F167W",5
"lib1","SARS-CoV-2","CTCATAATAAACATTG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F44Y C49N L57*",3
"lib1","SARS-CoV-2","CTCATAATTGCATAAC",3,24.72,7.27,-3.49,0.32,1.5,1.01,0.03,">1 nonsynonymous","P82G I104W Q144S Q163L",4
"lib1","SARS-CoV-2","CTCATACAAAAATCAT",7,161.41,10.66,-0.11,0.03,2.91,1.04,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","CTCATACACACTCCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41A P54C Y91* W106L E141Y G166M",6
"lib1","SARS-CoV-2","CTCATACATATAATTA",3,20.76,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F44L T46R S69L G101D G146K R179L",6
"lib1","SARS-CoV-2","CTCATACATCAGCTAT",3,67.74,10.72,-0.05,0.06,2.92,1.05,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","CTCATACCAACAACGC",3,92.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44N V71P A89P F99L S139G P161E",6
"lib1","SARS-CoV-2","CTCATACCTATGACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W N107Y R124S F185N",4
"lib1","SARS-CoV-2","CTCATACTAATAAACA",5,74.49,6.67,-4.1,0.44,1.5,1.15,0.03,">1 nonsynonymous","T55A F62D N107V N157H S184F",5
"lib1","SARS-CoV-2","CTCATAGAAAACAACA",2,56.51,10.65,-0.11,0.07,2.97,1.01,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","CTCATAGAAATTGCAC",3,22.94,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F8K Y123P",2
"lib1","SARS-CoV-2","CTCATAGCACATAACT",3,7.95,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","F12T L60I P82V",3
"lib1","SARS-CoV-2","CTCATAGCGAAAACTA",5,110.85,9.59,-1.18,0.13,1.89,1.06,0.01,">1 nonsynonymous","T3S A89Y F160W",3
"lib1","SARS-CoV-2","CTCATAGCTATGTTCC",3,142.84,10.07,-0.69,0.08,2.64,1.03,0,">1 nonsynonymous","N120L T140P",2
"lib1","SARS-CoV-2","CTCATAGTATCCTCTA",3,57.94,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y35M G101V F156T S184A",4
"lib1","SARS-CoV-2","CTCATATAACTATAGG",1,18.59,6,-4.76,0.95,3,1.15,0.01,">1 nonsynonymous","R16M F99C",2
"lib1","SARS-CoV-2","CTCATATATATATTGT",1,8.04,9.32,-1.45,0.44,1.55,1.06,0.04,">1 nonsynonymous","N4A F12R",2
"lib1","SARS-CoV-2","CTCATATATCCGCTAA",7,79.51,10.73,-0.03,0.05,2.85,1.09,0,">1 nonsynonymous","L5R N120K",2
"lib1","SARS-CoV-2","CTCATATCAATATCTG",11,92.2,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T100L A105I N120Q C158D",4
"lib1","SARS-CoV-2","CTCATATGTCCGGTGA",3,27.74,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","R27S F47V Y93A G117C K128V",5
"lib1","SARS-CoV-2","CTCATATTACAGCAGC",3,1.87,NA,NA,NA,NA,NA,NA,"stop","N64F S139C C158* Y165M",4
"lib1","SARS-CoV-2","CTCATATTGACTCCCC",3,22,10.53,-0.23,0.07,2.94,1.03,0,">1 nonsynonymous","V52C C61A T85K P149S",4
"lib1","SARS-CoV-2","CTCATATTGTGACATA",2,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H F17L G86K K114L R127H Y175F A190T",7
"lib1","SARS-CoV-2","CTCATCAAACCAAGGA",3,28.05,6.19,-4.57,0.75,1.5,1.16,0.02,">1 nonsynonymous","A14S Y35N N120V F156W G174T",5
"lib1","SARS-CoV-2","CTCATCACGAATACAC",4,13.31,10.72,-0.04,0.08,2.99,1.02,0,"1 nonsynonymous","T140H",1
"lib1","SARS-CoV-2","CTCATCACGTAGCGGT",2,33.81,10.43,-0.33,0.09,3,1,0,">1 nonsynonymous","G51K Y91F K114M",3
"lib1","SARS-CoV-2","CTCATCAGAGGATCCA",11,201.91,10.77,0.01,0.07,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCATCATGAGCATCT",2,9.72,6.63,-4.13,0.33,1.5,1.06,0.01,">1 nonsynonymous","D137H P149W",2
"lib1","SARS-CoV-2","CTCATCCAATAAACGC",11,116.17,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","E135G I142K C150I P169L",4
"lib1","SARS-CoV-2","CTCATCCCAAGGAACT",4,32.19,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","F12K F167T",2
"lib1","SARS-CoV-2","CTCATCCCGTATCCCT",3,48.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S F99A",2
"lib1","SARS-CoV-2","CTCATCCTCAGTGATA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D V182H",2
"lib1","SARS-CoV-2","CTCATCGAGTATAGAC",9,183.52,10.22,-0.54,0.03,2.89,1,0,">1 nonsynonymous","N40T G152C",2
"lib1","SARS-CoV-2","CTCATCTAAAATTTAT",2,37.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38Y S45F Y159A",3
"lib1","SARS-CoV-2","CTCATCTCCCTATGAA",4,51.07,10.37,-0.39,0.05,2.93,1,0,">1 nonsynonymous","N4Y N58R",2
"lib1","SARS-CoV-2","CTCATGAAAAACAGAC",1,1.35,NA,NA,NA,NA,NA,NA,"stop","N13F A105* Y119R",3
"lib1","SARS-CoV-2","CTCATGAAGCTGACGA",8,48.31,10.64,-0.12,0.05,2.94,1,0,">1 nonsynonymous","T85R F126L S184V",3
"lib1","SARS-CoV-2","CTCATGACCAGTACGT",3,1.92,NA,NA,NA,NA,NA,NA,"stop","S69W Y119* F156K",3
"lib1","SARS-CoV-2","CTCATGATATACCCGA",8,41.97,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25L T85V D112V",3
"lib1","SARS-CoV-2","CTCATGATGGTCCCAC",2,51.4,10.65,-0.11,0.05,2.94,1.01,0,"1 nonsynonymous","A67V",1
"lib1","SARS-CoV-2","CTCATGCAGGAGATAT",3,32.19,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9Q G74S L95N",3
"lib1","SARS-CoV-2","CTCATGCCCCCTTCAA",6,64.2,10.68,-0.08,0.09,2.78,1.11,0,"1 nonsynonymous","P54H",1
"lib1","SARS-CoV-2","CTCATGCTAATAGAAT",1,32.88,10.61,-0.15,0.08,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCATGGCTTACTGTA",7,140.86,10.23,-0.54,0.04,2.88,1.02,0,">1 nonsynonymous","F62T Y91H T100F",3
"lib1","SARS-CoV-2","CTCATGGTATAATTAA",3,26.4,6,-4.76,1.86,3,1.09,0,">1 nonsynonymous","A22P Q84K N151V T170K",4
"lib1","SARS-CoV-2","CTCATGTCCGAAAGGG",1,12.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P54K C61Y Y93S I142L",4
"lib1","SARS-CoV-2","CTCATGTCCGATAGGG",3,29.94,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L38T Y93I",2
"lib1","SARS-CoV-2","CTCATGTCGTCTTTGG",8,179.81,10.66,-0.1,0.04,2.89,1.04,0,">1 nonsynonymous","Q84Y I138T V173K",3
"lib1","SARS-CoV-2","CTCATGTGAGTAGGAA",2,23.37,10.01,-0.76,0.08,2.08,1,0,">1 nonsynonymous","R16Y T100Q F185T",3
"lib1","SARS-CoV-2","CTCATGTGTATTACTA",4,53.45,10.63,-0.14,0.05,2.89,1.06,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","CTCATTAAATAGTAAC",9,52.72,6,-4.76,0.99,1.5,1.12,0.01,">1 nonsynonymous","F47C D68Y P161H",3
"lib1","SARS-CoV-2","CTCATTAACCATACTA",6,36.48,10.35,-0.41,0.09,2.86,1.02,0,">1 nonsynonymous","L60S P149L",2
"lib1","SARS-CoV-2","CTCATTATATAATAAG",1,9.07,10.17,-0.6,0.16,2.8,1,0.01,">1 nonsynonymous","C6F T55A",2
"lib1","SARS-CoV-2","CTCATTATTACAAACG",10,119.23,9.86,-0.91,0.05,2.86,1.04,0,"1 nonsynonymous","F126W",1
"lib1","SARS-CoV-2","CTCATTATTACACATC",5,74.76,9.87,-0.89,0.1,1.84,1.1,0,">1 nonsynonymous","T3Q V181A",2
"lib1","SARS-CoV-2","CTCATTCAATTTAAGT",1,32.26,10.3,-0.46,0.06,2.93,1.02,0,">1 nonsynonymous","S41L S45K",2
"lib1","SARS-CoV-2","CTCATTCCTCCCCTCG",5,66.23,10.6,-0.16,0.03,2.88,1.05,0,">1 nonsynonymous","T3K V173G",2
"lib1","SARS-CoV-2","CTCATTCGAAACACGC",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N13M G51M D98G N157R L187F",6
"lib1","SARS-CoV-2","CTCATTGACTACTACA",4,72.37,9.29,-1.47,0.11,2.59,1.16,0,">1 nonsynonymous","F134G Q176A",2
"lib1","SARS-CoV-2","CTCATTGCACTGGACC",9,138.09,8.98,-1.79,0.2,1.53,1.15,0.02,">1 nonsynonymous","S41A P82L",2
"lib1","SARS-CoV-2","CTCATTGCGCCATAGC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S45M C61* D90F",3
"lib1","SARS-CoV-2","CTCATTGTACTAAATG",4,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R T85M D90H P96L",4
"lib1","SARS-CoV-2","CTCATTTAAAACTCCA",1,1.06,NA,NA,NA,NA,NA,NA,"stop","T85K G116I R127K A145V P149*",5
"lib1","SARS-CoV-2","CTCATTTAAGTGTGTC",1,6.31,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","C6W K26R W106G N118K S147P G166K",6
"lib1","SARS-CoV-2","CTCATTTCACTGTTAA",7,77.21,10.27,-0.49,0.05,2.87,1.03,0,">1 nonsynonymous","N1Q Y39N N64M P191T",4
"lib1","SARS-CoV-2","CTCATTTGGCAATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35L N58L Q84* F99V N130S V153L",6
"lib1","SARS-CoV-2","CTCATTTGTCCAGTTT",3,18.56,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61E P96L R124D",3
"lib1","SARS-CoV-2","CTCATTTTGGCTCCTA",1,0.59,NA,NA,NA,NA,NA,NA,"stop","F17W Y39* Y123H K128R",4
"lib1","SARS-CoV-2","CTCATTTTTTGGTAGA",3,77.89,9.79,-0.98,0.14,2.24,1.04,0.01,">1 nonsynonymous","F44E I138K C195S",3
"lib1","SARS-CoV-2","CTCCAAAACCACGATG",3,36.96,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87S F167V",2
"lib1","SARS-CoV-2","CTCCAAAACTACAAAG",7,58.82,6.31,-4.46,0.49,1.5,1.17,0.01,">1 nonsynonymous","S36L A42V F99I P149V",4
"lib1","SARS-CoV-2","CTCCAAAAGTTTTCTT",2,98.08,10.85,0.08,0.1,2.88,1.05,0,"1 nonsynonymous","K198R",1
"lib1","SARS-CoV-2","CTCCAAAATAATCGAA",9,2.94,NA,NA,NA,NA,NA,NA,"stop","R16E V71* D90N",3
"lib1","SARS-CoV-2","CTCCAAAATCATGACT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A G83F K94L",3
"lib1","SARS-CoV-2","CTCCAAAGAAAGTGTC",4,43.1,6.28,-4.48,0.52,1.5,1.22,0.01,">1 nonsynonymous","L95R F134T",2
"lib1","SARS-CoV-2","CTCCAAAGTGTACTCC",9,43.06,6,-4.76,1.09,1.5,1.21,0.02,">1 nonsynonymous","T15L I88N S139A N171I",4
"lib1","SARS-CoV-2","CTCCAAATACAGCAAA",15,114.64,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F62A K94G N118L V173L",4
"lib1","SARS-CoV-2","CTCCAAATTGTAATAG",2,14.8,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F99H P149Q V181W",3
"lib1","SARS-CoV-2","CTCCAAATTTTAGTAA",5,57.74,10.73,-0.04,0.05,2.8,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCCAACAAAAATAGA",6,87.78,6.04,-4.72,0.59,1.5,1.15,0.01,">1 nonsynonymous","R16N T85L W106M L122S Y175C",5
"lib1","SARS-CoV-2","CTCCAACATTCTGATA",1,15.48,10.69,-0.07,0.09,2.98,1.03,0,">1 nonsynonymous","T140I E154S",2
"lib1","SARS-CoV-2","CTCCAACCAAACATTT",19,1.48,NA,NA,NA,NA,NA,NA,"stop","R25L I80* V103E Y159S S184*",5
"lib1","SARS-CoV-2","CTCCAACCACGAGAGC",5,0,NA,NA,NA,NA,NA,NA,"stop","I2G Y119N C150*",3
"lib1","SARS-CoV-2","CTCCAACCGTCGCCAT",5,2.55,NA,NA,NA,NA,NA,NA,"stop","A67N L162* P197W",3
"lib1","SARS-CoV-2","CTCCAACTCCACTCCG",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G P149W R179A",3
"lib1","SARS-CoV-2","CTCCAAGAAATGGCAG",10,108.06,9.89,-0.88,0.08,2.11,1.06,0,">1 nonsynonymous","T55A K94V A192T S200V",4
"lib1","SARS-CoV-2","CTCCAAGAAGTGTCAG",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D G86R",2
"lib1","SARS-CoV-2","CTCCAAGAATACCCCG",2,117.01,10.5,-0.26,0.05,2.91,1.03,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","CTCCAAGATCTTTGAT",2,46.36,10.11,-0.65,0.09,2.75,1,0,">1 nonsynonymous","D90N G116T I138K",3
"lib1","SARS-CoV-2","CTCCAAGCAATACGAA",4,96.31,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N107D C158R",2
"lib1","SARS-CoV-2","CTCCAAGCATGGACTG",9,102.97,7.95,-2.82,0.21,1.5,1.13,0.01,">1 nonsynonymous","G116S I142A F160K G174W Y178F",5
"lib1","SARS-CoV-2","CTCCAAGCCATGAAAT",2,81.73,10.17,-0.59,0.06,2.94,1,0,">1 nonsynonymous","I2Y E154V P197T",3
"lib1","SARS-CoV-2","CTCCAAGGCACTAAGC",1,13.12,10.74,-0.02,0.1,2.96,1,0,">1 nonsynonymous","G9H T85A",2
"lib1","SARS-CoV-2","CTCCAAGGCCAACCTT",4,28.71,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G146M P161F",2
"lib1","SARS-CoV-2","CTCCAAGTGAATTTAT",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32Y V37L V65K P191N",4
"lib1","SARS-CoV-2","CTCCAATAATAGGTTC",1,52.27,10.67,-0.09,0.06,2.87,1,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","CTCCAATACGGGTAGC",1,24.75,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V77P C102L P133Y",3
"lib1","SARS-CoV-2","CTCCACAAATAGTAAC",2,62.66,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C61I D68G Q176K",3
"lib1","SARS-CoV-2","CTCCACAAATGATAAC",3,48.28,9.36,-1.41,0.08,2.83,1.09,0,"1 nonsynonymous","G117V",1
"lib1","SARS-CoV-2","CTCCACAACACATTGA",7,57.51,10.74,-0.02,0.06,2.86,1.06,0,">1 nonsynonymous","L5Y P133A",2
"lib1","SARS-CoV-2","CTCCACACCGACGTCC",1,23.3,10.26,-0.5,0.09,2.86,1.05,0,">1 nonsynonymous","G83Y A89T",2
"lib1","SARS-CoV-2","CTCCACAGGCTGATAA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib1","SARS-CoV-2","CTCCACCAAGTCCGCG",2,34.53,9.71,-1.05,0.14,1.98,1.09,0.01,">1 nonsynonymous","D90G S147L N151L",3
"lib1","SARS-CoV-2","CTCCACCAGGTCAGTA",3,136.97,6.01,-4.75,0.63,1.5,1.15,0.01,">1 nonsynonymous","A81Y R127L G146K F160P Q176V",5
"lib1","SARS-CoV-2","CTCCACCGAAGATCAC",3,31.59,10.59,-0.17,0.04,2.95,1,0,">1 nonsynonymous","E10T K56G",2
"lib1","SARS-CoV-2","CTCCACCGACGACGGC",2,57.23,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","G86N C102D F156I",3
"lib1","SARS-CoV-2","CTCCACCTCACCAGGG",1,15.63,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","F17H Y35T Q84K K132A L162K",5
"lib1","SARS-CoV-2","CTCCACGATAATCAGT",1,29.14,10.54,-0.22,0.03,2.93,1.03,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","CTCCACGGCCTGACCC",1,12.72,8.7,-2.06,0.14,2.8,1.07,0.01,">1 nonsynonymous","K26F Y119L",2
"lib1","SARS-CoV-2","CTCCACGTATTCTAAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","V77* S113Y Y119F S139E T170F T201*",6
"lib1","SARS-CoV-2","CTCCACGTTTCACTAG",6,80.02,10.57,-0.2,0.05,2.88,1.05,0,">1 nonsynonymous","Y35L A67L",2
"lib1","SARS-CoV-2","CTCCACTAGTAGGAAC",6,82.65,10.59,-0.18,0.06,2.79,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCACTGAAAATTCA",2,22.58,6,-4.76,0.75,3,1.14,0,">1 nonsynonymous","S53L N107L N120S S129R P149Q C195S",6
"lib1","SARS-CoV-2","CTCCAGAAATGCCCTG",5,42.47,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A22G V37L N64Y P82L K87N N110S Y123L T170P T201M",9
"lib1","SARS-CoV-2","CTCCAGAAATTGAACG",4,43.93,7.8,-2.97,0.3,1.5,1,0.05,">1 nonsynonymous","N64K T100Y I104S Y121D T201R",5
"lib1","SARS-CoV-2","CTCCAGACTAAAAAAA",7,28.99,6.16,-4.61,0.69,1.5,1.15,0.02,">1 nonsynonymous","N4L D34G S41A F70K",4
"lib1","SARS-CoV-2","CTCCAGAGCAGCCTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9C S41R Q84K V103* R136L",5
"lib1","SARS-CoV-2","CTCCAGAGTTCGTCAT",1,14.99,6,-4.76,2,3,1.14,0.02,">1 nonsynonymous","N1F L38F E76I P149D",4
"lib1","SARS-CoV-2","CTCCAGATGAGCCAAA",1,25.91,10.08,-0.69,0.1,2.73,1.12,0.01,">1 nonsynonymous","T15H N120W K198D",3
"lib1","SARS-CoV-2","CTCCAGCCAAGTCGAT",7,148.67,10.74,-0.03,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCAGCGGTCTATCT",1,12.88,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","W106S V182Y",2
"lib1","SARS-CoV-2","CTCCAGGATACTGAAC",3,25.82,10.02,-0.75,0.17,2.11,1,0.01,">1 nonsynonymous","T3N A42R Q84W D98P",4
"lib1","SARS-CoV-2","CTCCAGGATCATCCGC",4,98.85,10.06,-0.71,0.08,2.59,1.04,0,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","CTCCAGGATGAAAACT",7,123.21,10.79,0.03,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCAGGTTTAATAAG",10,206.64,10.81,0.04,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCAGTACACCTAAA",2,5.34,10.67,-0.1,0.12,2.96,1,0,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","CTCCAGTATCTAACAC",2,55.65,10.65,-0.11,0.08,2.72,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCAGTCGAAAACAA",2,18.11,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D90V Y119H E135K I142F G196T",5
"lib1","SARS-CoV-2","CTCCAGTTTCACCACG",1,40.7,10.46,-0.3,0.08,2.84,1.14,0,">1 nonsynonymous","Q84S N130M Q144A",3
"lib1","SARS-CoV-2","CTCCATAATAAGAGTA",11,122.61,10.76,0,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCATACCGAGTCCG",4,28.37,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I28K V52S G172R",3
"lib1","SARS-CoV-2","CTCCATACTTGGCCAT",6,65.49,8.82,-1.95,0.13,1.87,1.13,0.01,">1 nonsynonymous","N40F T55A G116D N151P K198L",5
"lib1","SARS-CoV-2","CTCCATATATTGAACG",2,24.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F62I F99A P161L Q168G",4
"lib1","SARS-CoV-2","CTCCATATCTCAGGGA",12,72.6,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A33K N64D A105N",3
"lib1","SARS-CoV-2","CTCCATATCTCTACCT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","S36* K94* C150H",3
"lib1","SARS-CoV-2","CTCCATCATACAACAT",13,171.12,10.14,-0.63,0.08,2.3,1.03,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","CTCCATCATTTTCCGT",8,126.68,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A18V W23S F44T",3
"lib1","SARS-CoV-2","CTCCATCCAAGGCTTT",2,0.37,NA,NA,NA,NA,NA,NA,"stop","I2V Y66S T85* L122R G146A G166R",6
"lib1","SARS-CoV-2","CTCCATCCATAAGCAT",2,7.12,6.98,-3.78,0.35,1.5,1.07,0.02,">1 nonsynonymous","P54N G83N L95V A105I",4
"lib1","SARS-CoV-2","CTCCATCCCAAGTCAA",1,47.38,10.69,-0.08,0.12,2.86,1.09,0.01,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","CTCCATCCTTCTCAAT",1,67.39,9.99,-0.77,0.05,2.84,1.02,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","CTCCATCTACTAACCC",5,107.57,10.56,-0.21,0.04,2.88,1.06,0,">1 nonsynonymous","N1I D97Q",2
"lib1","SARS-CoV-2","CTCCATCTAGGCACTA",6,65.2,9.88,-0.88,0.11,2.07,1.05,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","CTCCATCTATTGAGGA",10,108.21,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6R T85K C158P Q176T",4
"lib1","SARS-CoV-2","CTCCATCTTTAACCTA",3,13.02,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","S45T G51Y V71E A89R N107W",5
"lib1","SARS-CoV-2","CTCCATGTGTACGTGT",2,8.13,10.14,-0.62,0.08,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCATTAAACAAAAT",3,0.25,NA,NA,NA,NA,NA,NA,"stop","S29E R73S K114*",3
"lib1","SARS-CoV-2","CTCCATTAAATTACAA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L S19G K128L",3
"lib1","SARS-CoV-2","CTCCATTACAAACGAG",2,11.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V32S A105G R124S F134D",4
"lib1","SARS-CoV-2","CTCCATTCACATCCCG",1,50.96,9.63,-1.13,0.08,2.04,1.07,0,">1 nonsynonymous","Y35Q K94H F160S T201Y",4
"lib1","SARS-CoV-2","CTCCATTGTGACTGGT",2,25.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N92E D97H F156E",3
"lib1","SARS-CoV-2","CTCCATTTACACATGA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y C158I",2
"lib1","SARS-CoV-2","CTCCATTTGGTACGTT",2,11.51,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95S F99K W106R F156T V182T",5
"lib1","SARS-CoV-2","CTCCCAAATCGGAGAG",2,34.99,6,-4.76,0.92,1.5,1.16,0.01,">1 nonsynonymous","T55S Y121Q I138F G146Y",4
"lib1","SARS-CoV-2","CTCCCAACAAGATTTA",1,8.31,6.16,-4.6,0.96,3,1.15,0.04,">1 nonsynonymous","T15A A81G K94G P149N Q176R F185I",6
"lib1","SARS-CoV-2","CTCCCAACATTAGTCC",4,1.29,NA,NA,NA,NA,NA,NA,"stop","I88W N157C Y178K P197*",4
"lib1","SARS-CoV-2","CTCCCAACTATCAAGT",4,5.13,6.19,-4.57,2,3,1.01,0,">1 nonsynonymous","C49L K94Q",2
"lib1","SARS-CoV-2","CTCCCAAGCCGACGGC",3,46.85,9.31,-1.45,0.1,2.64,1.05,0,">1 nonsynonymous","N1H T55V K114A Y143M",4
"lib1","SARS-CoV-2","CTCCCAAGTCATCGCG",1,44.63,8.57,-2.2,0.13,2.52,1.13,0.01,">1 nonsynonymous","A14S V32Y N64H Q176A",4
"lib1","SARS-CoV-2","CTCCCAATAGTCATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S A105S N107Q S129* E141K",5
"lib1","SARS-CoV-2","CTCCCAATGACCGTGG",5,64.49,10.92,0.16,0.09,2.87,1.04,0,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","CTCCCACAATCGTTGG",8,141.49,10.75,-0.01,0.05,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCCCACACGAAAGAA",1,55.66,9.19,-1.57,0.08,2.91,1.06,0,">1 nonsynonymous","N64S F156E",2
"lib1","SARS-CoV-2","CTCCCACCAAAATGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* A81Y R127V",3
"lib1","SARS-CoV-2","CTCCCACCAGACAACA",2,21.35,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","W106A Y123T L131V L187M T201E",5
"lib1","SARS-CoV-2","CTCCCACGGTCGCTAA",16,126.19,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y50L P96L G116V E154H Y178S",5
"lib1","SARS-CoV-2","CTCCCACTACGCTTGA",9,177.31,10.64,-0.13,0.11,2.45,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCCACTGGTTTATG",8,1,NA,NA,NA,NA,NA,NA,"stop","T55Y C150*",2
"lib1","SARS-CoV-2","CTCCCAGAAACTTGTC",1,15.27,9.23,-1.53,0.08,2.72,1.1,0,">1 nonsynonymous","T3G F47I L125Q Y178V",4
"lib1","SARS-CoV-2","CTCCCAGATAAGTAGG",2,19.95,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","T3P T55N D68L G83K D90Y",5
"lib1","SARS-CoV-2","CTCCCAGCCAAACTGA",1,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E E76N",2
"lib1","SARS-CoV-2","CTCCCAGGCGCAGTAG",3,29.78,10.74,-0.02,0.09,2.92,1.01,0.01,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","CTCCCAGTACAAATAA",2,6.87,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","V180P",1
"lib1","SARS-CoV-2","CTCCCATAAAAAAAAA",6,75.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P G86D F156G",3
"lib1","SARS-CoV-2","CTCCCATAACGTGCAT",2,29.48,10.83,0.06,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCCATAAGATACCA",3,10.59,8.86,-1.9,0.23,2.21,1,0.02,">1 nonsynonymous","R136M G152V",2
"lib1","SARS-CoV-2","CTCCCATCCAACATTG",3,55.95,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C102Q F167L",2
"lib1","SARS-CoV-2","CTCCCATTGCAGGAAA",9,29.97,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14L N58T P96S V181S",4
"lib1","SARS-CoV-2","CTCCCCACATTATAAA",1,11.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49F T170V",2
"lib1","SARS-CoV-2","CTCCCCAGATACTTAG",1,22.63,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y39I S69E D90Y",3
"lib1","SARS-CoV-2","CTCCCCAGCCCGGACT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","A33T G51N D59T N120I K128*",5
"lib1","SARS-CoV-2","CTCCCCCGGATATGTT",4,72.12,10.62,-0.15,0.07,2.87,1.1,0,"1 nonsynonymous","K48M",1
"lib1","SARS-CoV-2","CTCCCCCGTAAAAAAT",1,102.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31P S45L S113M Y178F",4
"lib1","SARS-CoV-2","CTCCCCCTTAACAGAA",2,39,10.12,-0.64,0.12,2.57,1.03,0.01,">1 nonsynonymous","N4S Y21S",2
"lib1","SARS-CoV-2","CTCCCCTAAATACTAC",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48S S147M",2
"lib1","SARS-CoV-2","CTCCCCTCTAGGAGGG",2,19.92,8.38,-2.39,0.11,2.17,1.06,0.01,"1 nonsynonymous","F167M",1
"lib1","SARS-CoV-2","CTCCCGAAGTAGAATT",4,23.75,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G83D F99G W106C G166C",4
"lib1","SARS-CoV-2","CTCCCGAATGAATCAA",2,15.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L38G C49F T55Y G101C G146W F185S",6
"lib1","SARS-CoV-2","CTCCCGACCAAATCTT",4,47.58,10.67,-0.1,0.06,2.92,1.03,0,"1 nonsynonymous","A18D",1
"lib1","SARS-CoV-2","CTCCCGCAAGTCGGCC",8,87.24,10.39,-0.37,0.04,2.8,1.06,0,">1 nonsynonymous","D98A K132T S164T",3
"lib1","SARS-CoV-2","CTCCCGCTCGTTAAGA",3,49.18,6.81,-3.96,0.22,1.65,1.1,0.01,">1 nonsynonymous","N13P K87R S164N P177T",4
"lib1","SARS-CoV-2","CTCCCGGATACGCACC",1,26.16,9.41,-1.36,0.38,1.5,1,0.08,">1 nonsynonymous","C6P T55R R78S F99I R124T",5
"lib1","SARS-CoV-2","CTCCCTAACGTCGCCT",4,128.51,8.77,-2,0.08,2.6,1.1,0,">1 nonsynonymous","G83F F167W",2
"lib1","SARS-CoV-2","CTCCCTAAGAATTCAA",2,42.18,10.52,-0.24,0.08,2.89,1.02,0,"1 nonsynonymous","F44H",1
"lib1","SARS-CoV-2","CTCCCTAATAGCTAGC",3,32.38,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P96L T100I Y121M",3
"lib1","SARS-CoV-2","CTCCCTACGAGGTGAT",6,97.81,10.01,-0.75,0.09,2.38,1.07,0,">1 nonsynonymous","G9W F62L I104T",3
"lib1","SARS-CoV-2","CTCCCTCCATGCAGAA",8,3.69,NA,NA,NA,NA,NA,NA,"stop","C6M Y21H K56G N120* G146L",5
"lib1","SARS-CoV-2","CTCCCTCCGTGCGATT",1,16.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13D W23Q D97C",3
"lib1","SARS-CoV-2","CTCCCTGCAATAAAGA",4,201.11,9.25,-1.51,0.05,2.82,1.09,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","CTCCCTTAATCTGACA",7,101.42,10.7,-0.07,0.09,2.92,1.04,0,"1 nonsynonymous","T201D",1
"lib1","SARS-CoV-2","CTCCCTTGGAAAACAC",5,41.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86F N130F Y143S",3
"lib1","SARS-CoV-2","CTCCCTTGTTCTTACA",3,6.27,6,-4.76,1.82,2.31,1.15,0.02,">1 nonsynonymous","L60Y K87Y P161L",3
"lib1","SARS-CoV-2","CTCCCTTTAATCGACA",8,107.11,6.68,-4.09,0.26,1.5,1.17,0.01,">1 nonsynonymous","I142F Q144K Y165H",3
"lib1","SARS-CoV-2","CTCCCTTTCACATCAC",6,86.11,9.01,-1.75,0.16,1.81,1.14,0.01,">1 nonsynonymous","Y35N E141L G155D",3
"lib1","SARS-CoV-2","CTCCGAAAAGTATGTA",6,56.76,9.91,-0.86,0.26,1.5,1,0.05,">1 nonsynonymous","V11S W23S",2
"lib1","SARS-CoV-2","CTCCGAAAATAAAATA",1,96.46,6.38,-4.39,0.67,1.5,1.22,0.03,">1 nonsynonymous","G83M Y91I Q176V S184P",4
"lib1","SARS-CoV-2","CTCCGAAAGCGAACAT",3,24.14,10.63,-0.14,0.09,2.69,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCGAAGACTACAAC",10,1.74,NA,NA,NA,NA,NA,NA,"stop","T46M D59I Y119H Y143N Q168*",5
"lib1","SARS-CoV-2","CTCCGAATATATACGT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F17* D34F K87N L122R N171C",5
"lib1","SARS-CoV-2","CTCCGAATTAATGTTA",1,66.4,10.8,0.04,0.06,2.89,1.07,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","CTCCGAATTTCCTGAT",2,16.28,7.44,-3.32,0.57,1.5,1.24,0.06,">1 nonsynonymous","A33F I88Y",2
"lib1","SARS-CoV-2","CTCCGACTACTAAACT",1,1.14,NA,NA,NA,NA,NA,NA,"stop","D90Y T201*",2
"lib1","SARS-CoV-2","CTCCGACTTCACTACG",7,41.84,6.72,-4.04,0.43,1.5,1.13,0.04,">1 nonsynonymous","S36P W106M I142K",3
"lib1","SARS-CoV-2","CTCCGAGGCATCAGCG",2,25.86,10.75,-0.02,0.09,2.84,1.07,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","CTCCGAGTCCATTATA",1,1.51,NA,NA,NA,NA,NA,NA,"stop","A14T S41L L122* S129A",4
"lib1","SARS-CoV-2","CTCCGATGGTAACATT",4,52.76,10.45,-0.32,0.06,2.8,1.01,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","CTCCGATTAACAACTG",3,1.5,NA,NA,NA,NA,NA,NA,"stop","K56* G83R Q176L",3
"lib1","SARS-CoV-2","CTCCGCAAACAGTTTC",3,59.59,9.2,-1.56,0.17,1.67,1.18,0.01,">1 nonsynonymous","F44L S53H G83I",3
"lib1","SARS-CoV-2","CTCCGCACGGAAATGC",16,225.68,9.96,-0.8,0.05,2.88,1.02,0,">1 nonsynonymous","K87M F160C Q168S",3
"lib1","SARS-CoV-2","CTCCGCAGCTTAATTT",2,0.46,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib1","SARS-CoV-2","CTCCGCATAAATACTA",1,1.35,NA,NA,NA,NA,NA,NA,"stop","L5Q D97V L162Y Q168* Q176V",5
"lib1","SARS-CoV-2","CTCCGCCACTTCTGAA",5,24.67,6,-4.76,1.86,3,1.15,0,">1 nonsynonymous","G74V N109Y R127S",3
"lib1","SARS-CoV-2","CTCCGCTCTTCCCCAT",1,1323.36,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","T55D D112Q L131G G174H",4
"lib1","SARS-CoV-2","CTCCGGAGTCTCAGAG",8,66.14,9.16,-1.61,0.13,1.54,1.17,0.01,">1 nonsynonymous","N4Y L95C",2
"lib1","SARS-CoV-2","CTCCGGATAAATGAGG",3,111.21,10.73,-0.04,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCGGATGTGTTGAA",1,2.63,NA,NA,NA,NA,NA,NA,"stop","C49G W106G N157*",3
"lib1","SARS-CoV-2","CTCCGGCGGCACGTGA",1,37.23,10.81,0.04,0.04,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCGGGCAATCTGGA",1,60.41,8.32,-2.45,0.1,2.64,1.09,0,">1 nonsynonymous","L60A T140M Y159V",3
"lib1","SARS-CoV-2","CTCCGGGTTAAGAATA",5,55.87,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I28K D68N N120V G166M S184C",5
"lib1","SARS-CoV-2","CTCCGGGTTATAACAA",6,53.28,9.67,-1.1,0.13,2,1.03,0.01,">1 nonsynonymous","N64A A105L",2
"lib1","SARS-CoV-2","CTCCGGGTTTTCTGAA",3,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29F T55H W106G",3
"lib1","SARS-CoV-2","CTCCGGTAACACGAAC",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L K94R C102L L187H",4
"lib1","SARS-CoV-2","CTCCGGTGACAACCTG",4,30.57,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S53Y N107T R136A",3
"lib1","SARS-CoV-2","CTCCGGTTAAAAAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A A105K Y123T S164M H189F",5
"lib1","SARS-CoV-2","CTCCGGTTTAATTCAG",3,13.92,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3M L5K Y35N G51C I80S N92V I138M Y143M",8
"lib1","SARS-CoV-2","CTCCGTAAATATTCGG",1,9.09,10.5,-0.26,0.13,2.78,1,0.01,">1 nonsynonymous","K26Q Q84N",2
"lib1","SARS-CoV-2","CTCCGTAGTCGCTCAA",4,45.06,10.3,-0.47,0.05,2.87,1.02,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","CTCCGTCAGAAGTGAC",2,0.5,NA,NA,NA,NA,NA,NA,"stop","K56Y L95W K128* F167N",4
"lib1","SARS-CoV-2","CTCCGTCCCATAGATG",2,16.59,9.56,-1.21,0.13,2.61,1,0.01,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","CTCCGTGAAAACGACT",1,9.78,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","C6S Q84L D90C A105S G155I",5
"lib1","SARS-CoV-2","CTCCGTGCAATTTTCG",6,180.66,10.68,-0.08,0.05,2.9,1.05,0,"1 nonsynonymous","K94R",1
"lib1","SARS-CoV-2","CTCCGTTCAAACAACA",11,158.8,10.62,-0.14,0.04,2.87,1.04,0,">1 nonsynonymous","T3L Q163R",2
"lib1","SARS-CoV-2","CTCCTAAAGAGAGGTG",1,21.83,9.26,-1.51,0.29,1.5,1.1,0.03,">1 nonsynonymous","A18M R136F",2
"lib1","SARS-CoV-2","CTCCTAACCATTGTGC",5,67.4,6.86,-3.9,0.43,1.5,1.12,0.04,">1 nonsynonymous","D75H I80H E141T",3
"lib1","SARS-CoV-2","CTCCTAACGCAAACCT",1,5.88,10.85,0.09,0.12,2.88,1.1,0.01,">1 nonsynonymous","I2D T140A",2
"lib1","SARS-CoV-2","CTCCTAAGCTTACACT",8,1.3,NA,NA,NA,NA,NA,NA,"stop","T55I C102* N120D",3
"lib1","SARS-CoV-2","CTCCTAATCAGACTTT",9,93.43,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W23Q K56E A89R",3
"lib1","SARS-CoV-2","CTCCTAATCCCCACAT",2,150.47,9.93,-0.84,0.08,2.21,1.05,0,">1 nonsynonymous","K94V T201N",2
"lib1","SARS-CoV-2","CTCCTAATTCTAGAAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","D59W D90* W106L",3
"lib1","SARS-CoV-2","CTCCTACAATTAGATC",5,127.13,10.71,-0.05,0.05,2.9,1.04,0,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","CTCCTACATCATAGAT",5,6.54,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6W D137R L183S",3
"lib1","SARS-CoV-2","CTCCTACATCATCCTA",2,39.66,8.73,-2.04,0.11,2.94,1.05,0.01,">1 nonsynonymous","C61P N109M K132S F156P N171S",5
"lib1","SARS-CoV-2","CTCCTACCCAACAATG",2,11.17,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F8L Y93P S164A H189V T201M",5
"lib1","SARS-CoV-2","CTCCTACTCAGGTTAT",2,7.03,NA,NA,NA,NA,NA,NA,"stop","R25V A33L N151*",3
"lib1","SARS-CoV-2","CTCCTACTCGCGAATA",3,22.08,6.09,-4.67,0.7,3,1.22,0.01,">1 nonsynonymous","N4F C61E A67N S129F",4
"lib1","SARS-CoV-2","CTCCTAGATTTAGTAT",15,115.15,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12C P149I C158R",3
"lib1","SARS-CoV-2","CTCCTAGCCTTAAAAC",1,19.83,8.74,-2.03,0.2,1.78,1.16,0.02,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","CTCCTAGCTTACTATA",3,39.26,9.78,-0.98,0.13,1.98,1.12,0.01,">1 nonsynonymous","E10R I28F P133D V181I",4
"lib1","SARS-CoV-2","CTCCTAGTCGCTACAT",5,29.34,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y39R P96L S139R G166L",4
"lib1","SARS-CoV-2","CTCCTAGTTTCAATGC",4,46.35,10.64,-0.12,0.09,2.92,1.05,0,">1 nonsynonymous","A33F S184Y",2
"lib1","SARS-CoV-2","CTCCTATAAGCCCATC",4,34.13,9.85,-0.91,0.14,1.71,1.17,0.01,">1 nonsynonymous","T100H P133L",2
"lib1","SARS-CoV-2","CTCCTATACCACTCCT",1,17.58,10.9,0.14,0.11,2.88,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTCCTATTAAGAATTC",2,1.96,NA,NA,NA,NA,NA,NA,"stop","T55* I88C",2
"lib1","SARS-CoV-2","CTCCTCAATTGAATAT",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T G51A Q84L N118G",4
"lib1","SARS-CoV-2","CTCCTCACAACTAGAA",2,17.76,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","V11D K94P Y119S Q144N P169S",5
"lib1","SARS-CoV-2","CTCCTCACTTAATAAC",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M S129L G152L",3
"lib1","SARS-CoV-2","CTCCTCAGTAAAGTTG",3,59.17,10.76,-0.01,0.06,2.95,1.02,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","CTCCTCCAGACACCAT",1,44.94,6.18,-4.58,0.28,1.5,1.11,0,">1 nonsynonymous","W106S S113A V173S P191S",4
"lib1","SARS-CoV-2","CTCCTCCCAAAAGACT",11,1.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165Q",1
"lib1","SARS-CoV-2","CTCCTCCCATATGCAG",6,23.29,NA,NA,NA,NA,NA,NA,"stop","L38* T46P S113K N157L",4
"lib1","SARS-CoV-2","CTCCTCCTTTGAGGCT",2,5.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L S139C P161R",3
"lib1","SARS-CoV-2","CTCCTGAGGTCAATAC",3,47.64,10.06,-0.7,0.1,2.56,1.07,0,">1 nonsynonymous","K114W Q144L T201I",3
"lib1","SARS-CoV-2","CTCCTGATTCTAAGCT",6,1.86,NA,NA,NA,NA,NA,NA,"stop","S19A D112N L122Y F167* T201Q",5
"lib1","SARS-CoV-2","CTCCTGCAAAAAAAGA",6,31.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58A L122F R124L T201N",4
"lib1","SARS-CoV-2","CTCCTGCACTCAATAA",9,65,10.24,-0.52,0.05,2.83,1,0,"1 nonsynonymous","E10Y",1
"lib1","SARS-CoV-2","CTCCTGGATCCTCAAC",3,33.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6P S36E Q84W G101M",4
"lib1","SARS-CoV-2","CTCCTGGATGAGAATA",3,15.79,10.76,0,0.1,2.8,1.16,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","CTCCTGTGAGAAAATT",5,0,NA,NA,NA,NA,NA,NA,"stop","P7N V37I S43V R124P T201*",5
"lib1","SARS-CoV-2","CTCCTGTTTCGAAGCA",3,120.48,10.28,-0.49,0.06,2.81,1.01,0,">1 nonsynonymous","S36A S45P",2
"lib1","SARS-CoV-2","CTCCTTAAAACAAAGG",4,34.07,9.84,-0.93,0.2,1.64,1.11,0.01,">1 nonsynonymous","S41F Y123T Q144K",3
"lib1","SARS-CoV-2","CTCCTTAAAAGCGATA",5,73.65,6.01,-4.76,0.53,1.5,1.1,0,">1 nonsynonymous","L5M C31N D59T K94A I142K",5
"lib1","SARS-CoV-2","CTCCTTAAGACGCTCA",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113G K128T",2
"lib1","SARS-CoV-2","CTCCTTAATATTATCA",2,1.75,NA,NA,NA,NA,NA,NA,"stop","V103F K128G E154K T170*",4
"lib1","SARS-CoV-2","CTCCTTAGCTCACAGA",4,92.4,10.25,-0.52,0.09,2.73,1.01,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","CTCCTTATTGAGTTAA",2,2.58,NA,NA,NA,NA,NA,NA,"stop","F8H L60* I142V",3
"lib1","SARS-CoV-2","CTCCTTCAAATACACA",2,84.81,10.74,-0.03,0.09,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCCTTCAAGATAGCA",9,1.39,NA,NA,NA,NA,NA,NA,"stop","C6* A81C D98N S113N K198N",5
"lib1","SARS-CoV-2","CTCCTTGAACAATTAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N C49V F156V",3
"lib1","SARS-CoV-2","CTCCTTGCTGACATAC",6,52.81,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4V Y35T D98A Y121L R136F T170I",6
"lib1","SARS-CoV-2","CTCCTTGGATCATCCT",1,17.79,6,-4.76,2,3,1.21,0,">1 nonsynonymous","F17L N92K",2
"lib1","SARS-CoV-2","CTCCTTGGTGATAACG",8,152.47,9.72,-1.05,0.11,2.24,1.11,0,">1 nonsynonymous","F12T K87R",2
"lib1","SARS-CoV-2","CTCCTTTATATTTATA",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V I142Q",2
"lib1","SARS-CoV-2","CTCCTTTCAGTAATAT",2,96.47,10.73,-0.04,0.08,2.89,1.07,0,"1 nonsynonymous","R78K",1
"lib1","SARS-CoV-2","CTCCTTTCCCACAAAC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I2A K56V C61R D90* I104Y N157I",6
"lib1","SARS-CoV-2","CTCCTTTGAAGAAAAC",1,34.86,7.1,-3.66,0.29,1.51,1.15,0.02,">1 nonsynonymous","Y119P F126E",2
"lib1","SARS-CoV-2","CTCCTTTTAGTGTGGT",3,32.38,6,-4.76,2,3,1.18,0,">1 nonsynonymous","L5N R16A S113L Y123I S129I F156M",6
"lib1","SARS-CoV-2","CTCGAAAAAACAAGAC",5,60.53,9.95,-0.81,0.08,1.97,1.07,0,">1 nonsynonymous","I28R A42N",2
"lib1","SARS-CoV-2","CTCGAAAACACTCTAC",5,3.19,NA,NA,NA,NA,NA,NA,"stop","A89V P96* K132N V180W",4
"lib1","SARS-CoV-2","CTCGAAAACTCCTCTA",3,52.99,10.21,-0.55,0.05,2.84,1,0,">1 nonsynonymous","S53L G116P S184L",3
"lib1","SARS-CoV-2","CTCGAAAATAAAAAAT",2,87.42,8.52,-2.24,0.11,2.67,1.05,0,">1 nonsynonymous","S129F Y143E",2
"lib1","SARS-CoV-2","CTCGAAACATGATATA",6,82.61,10.67,-0.1,0.1,2.86,1.09,0,"1 nonsynonymous","S43H",1
"lib1","SARS-CoV-2","CTCGAAACCTACGAAA",1,14.28,6,-4.76,2,1.5,1.12,0.02,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","CTCGAAACCTCAAAGG",1,60.12,9.56,-1.2,0.05,2.87,1.09,0,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","CTCGAAACGTTTGCGT",7,61.42,9.03,-1.73,0.27,1.5,1,0.04,">1 nonsynonymous","D90T F99N P133L",3
"lib1","SARS-CoV-2","CTCGAAACTCATGTTT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","N1T G101* E154Y",3
"lib1","SARS-CoV-2","CTCGAAACTCCGACAG",8,2.03,NA,NA,NA,NA,NA,NA,"stop","V37* S45Q F156E",3
"lib1","SARS-CoV-2","CTCGAAAGCAATAACG",3,18.32,6.06,-4.7,1.23,1.5,1.24,0.04,">1 nonsynonymous","L5P L183S",2
"lib1","SARS-CoV-2","CTCGAAAGCGCTTCAT",4,1.65,NA,NA,NA,NA,NA,NA,"stop","E10P T15S Y21*",3
"lib1","SARS-CoV-2","CTCGAAAGGACTCGTT",6,10.27,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5S N13C A89G",3
"lib1","SARS-CoV-2","CTCGAACAAAATGGAC",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101W V181A",2
"lib1","SARS-CoV-2","CTCGAACAACCACTCA",2,24.07,10.61,-0.16,0.05,2.96,1,0,">1 nonsynonymous","T3S V103I",2
"lib1","SARS-CoV-2","CTCGAACACTCTCCTT",1,31.99,10.86,0.1,0.08,2.94,1.02,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","CTCGAACCAAACCCAA",5,86.92,9.64,-1.13,0.08,2.87,1.02,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","CTCGAACCTAGCACAT",1,7.44,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F44Q A67P T148G S164F N171F",5
"lib1","SARS-CoV-2","CTCGAACTGAAACCAA",2,50.35,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44A D112R N120F T148I",4
"lib1","SARS-CoV-2","CTCGAAGAATACATCC",3,0.97,NA,NA,NA,NA,NA,NA,"stop","P169* K199I",2
"lib1","SARS-CoV-2","CTCGAAGATATAATTA",1,8.35,NA,NA,NA,NA,NA,0.43,"1 nonsynonymous","R124P",1
"lib1","SARS-CoV-2","CTCGAAGCCAGGAAAT",18,50.57,6.12,-4.64,0.49,1.5,1.1,0.01,">1 nonsynonymous","E76D V180R",2
"lib1","SARS-CoV-2","CTCGAAGCTCCATACG",3,50.95,6,-4.76,1.7,1.5,1.15,0.01,">1 nonsynonymous","C6D Y165L",2
"lib1","SARS-CoV-2","CTCGAAGTTGTTAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11K T201V",2
"lib1","SARS-CoV-2","CTCGAATAGATATAAT",4,90.29,9.98,-0.78,0.13,2.2,1.06,0.01,">1 nonsynonymous","Y50S K56E",2
"lib1","SARS-CoV-2","CTCGAATATGGCGCTA",1,11.99,10.82,0.06,0.06,2.99,1,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","CTCGAATCGTAATAAT",2,22.58,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","I28F D68F S139T L162D",4
"lib1","SARS-CoV-2","CTCGAATCTATCTCGT",9,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101R R124K",2
"lib1","SARS-CoV-2","CTCGAATTACCACCTA",3,21.68,10.05,-0.71,0.1,2.68,1,0.01,">1 nonsynonymous","N4K Y91R",2
"lib1","SARS-CoV-2","CTCGAATTGAAACAGT",4,61.79,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L60P P96Y G155I K198Q",4
"lib1","SARS-CoV-2","CTCGAATTGTTTAACT",2,7.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99Y N107L T140F",3
"lib1","SARS-CoV-2","CTCGAATTTTATGGTA",3,38.47,10.26,-0.5,0.04,2.99,1,0,">1 nonsynonymous","S53I K87N S184Q",3
"lib1","SARS-CoV-2","CTCGACAAGAAGACGT",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32G V115N",2
"lib1","SARS-CoV-2","CTCGACAATATGTAAA",5,14.01,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S19K I142L C158S",3
"lib1","SARS-CoV-2","CTCGACAATTACTATT",2,19.02,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y123S C158I Y165I",3
"lib1","SARS-CoV-2","CTCGACACTTTGAAAC",5,18.14,9.46,-1.3,0.2,2.03,1.17,0.02,">1 nonsynonymous","D34G A42T F62M E141N S184Y",5
"lib1","SARS-CoV-2","CTCGACAGTCCGAATA",4,41.22,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86Y D97A C158S",3
"lib1","SARS-CoV-2","CTCGACATGAAATCAA",5,158.39,10.07,-0.69,0.06,2.62,1.03,0,">1 nonsynonymous","R136S I142M",2
"lib1","SARS-CoV-2","CTCGACATTATAAAAA",2,8.73,9.36,-1.4,0.19,2.07,1.06,0.02,">1 nonsynonymous","P7F Q144L",2
"lib1","SARS-CoV-2","CTCGACCCAAGCGGCA",9,44.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152I Y165R",2
"lib1","SARS-CoV-2","CTCGACTAAGTAGTTG",7,59.74,8.73,-2.04,0.25,1.5,1.14,0.03,">1 nonsynonymous","F44L D59Y Y66S G83M K87R",5
"lib1","SARS-CoV-2","CTCGACTAAGTGTAAA",1,11.5,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","Y21L S69K P161S G166V",4
"lib1","SARS-CoV-2","CTCGAGAAAAAGTTTA",8,33.13,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T46S T55V L95S A105V P149M",5
"lib1","SARS-CoV-2","CTCGAGAACCGTTTGG",5,98.75,10.72,-0.04,0.06,2.84,1.1,0,"1 nonsynonymous","K114F",1
"lib1","SARS-CoV-2","CTCGAGAACCTCCTAA",6,70.89,6,-4.76,1.61,1.5,1.19,0.01,">1 nonsynonymous","Y50R Y119S K198W",3
"lib1","SARS-CoV-2","CTCGAGACAACACACC",9,4.5,NA,NA,NA,NA,NA,NA,"stop","I28D Y123* P149F",3
"lib1","SARS-CoV-2","CTCGAGATACCTAAGT",7,124.98,10.68,-0.08,0.03,2.94,1.01,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","CTCGAGCAACGACTTA",3,83.61,10.69,-0.07,0.05,2.95,1,0,">1 nonsynonymous","T3L E141N",2
"lib1","SARS-CoV-2","CTCGAGCAGAGGTGAG",4,22.51,6,-4.76,2,3,1.06,0,">1 nonsynonymous","P7L F99K",2
"lib1","SARS-CoV-2","CTCGAGCCAATAGCAA",1,45.28,8.8,-1.97,0.06,2.69,1.1,0,">1 nonsynonymous","E141V F156R S164I",3
"lib1","SARS-CoV-2","CTCGAGCCCTTCAACA",6,0,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","CTCGAGCTCAAAACAT",2,174.43,7.77,-3,0.23,1.5,1.11,0.02,">1 nonsynonymous","S53Y N58K N157C",3
"lib1","SARS-CoV-2","CTCGAGCTTTGGCCTA",3,12.28,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","G86S G146Q",2
"lib1","SARS-CoV-2","CTCGAGGAAGAATACG",4,75.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F47V F62G K87A Y143E",4
"lib1","SARS-CoV-2","CTCGAGGAATTTGTCG",3,33.53,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F99N R136G P191C",3
"lib1","SARS-CoV-2","CTCGAGGAGTACACTC",4,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G N30I P96L",3
"lib1","SARS-CoV-2","CTCGAGGATTCGAGTA",1,6.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6Y C61W I142D",3
"lib1","SARS-CoV-2","CTCGAGGCTTACACTA",2,27.09,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","D90I G101T",2
"lib1","SARS-CoV-2","CTCGAGGTATAATTAA",5,38.6,10.79,0.03,0.08,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCGAGGTGGGATAGG",4,2.01,NA,NA,NA,NA,NA,NA,"stop","P82C K94S G116W G146* V173S",5
"lib1","SARS-CoV-2","CTCGAGTCGTACGCGT",2,15.26,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F12R C49V T201K",3
"lib1","SARS-CoV-2","CTCGAGTTCTTCCTAC",1,6.74,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L38K D137P F156W",3
"lib1","SARS-CoV-2","CTCGAGTTTTTGTTAG",1,12.59,10.58,-0.18,0.12,2.92,1,0,">1 nonsynonymous","E135H V173M",2
"lib1","SARS-CoV-2","CTCGATAAAGAAAGTA",3,56.99,8.36,-2.4,0.12,2.52,1.13,0.01,">1 nonsynonymous","N107D G166V",2
"lib1","SARS-CoV-2","CTCGATAAGAGGTTGT",1,43.83,10.85,0.09,0.1,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCGATAGGGATTGGC",6,142.55,8.52,-2.25,0.12,2.76,1.04,0,">1 nonsynonymous","E76D V115F Y175S",3
"lib1","SARS-CoV-2","CTCGATATTTGGGATA",17,131.51,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12S T55G W106P L131N",4
"lib1","SARS-CoV-2","CTCGATCAAACTTATT",2,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46G R127N",2
"lib1","SARS-CoV-2","CTCGATCACAAACTTC",8,35.34,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","S43F V71D",2
"lib1","SARS-CoV-2","CTCGATGAAAAAGAGA",4,40.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6V T46V P82F",3
"lib1","SARS-CoV-2","CTCGATGAAACAAAAA",2,23.87,6,-4.76,1.93,3,1.18,0.01,">1 nonsynonymous","N64F D112S Y123V",3
"lib1","SARS-CoV-2","CTCGATGAGTGAGAAC",7,42.33,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14L P82Y D97M G116D S129K G152S",6
"lib1","SARS-CoV-2","CTCGATGCACAATTAA",3,35.7,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T46W I80M P96S R136T",4
"lib1","SARS-CoV-2","CTCGATGGTATTACCT",1,13.34,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I104D E154S",2
"lib1","SARS-CoV-2","CTCGATGTCGCCGGCA",2,5.31,NA,NA,NA,NA,NA,NA,"stop","D68* N92Y W106F L122F",4
"lib1","SARS-CoV-2","CTCGATTACAAAATAA",8,179.96,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L38Y G51I N64Y Q176S",4
"lib1","SARS-CoV-2","CTCGATTACAACGCAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","V32P G86L F99*",3
"lib1","SARS-CoV-2","CTCGATTGATTACAAC",7,0.65,NA,NA,NA,NA,NA,NA,"stop","Y35W D98* F126H P169G Q176V",5
"lib1","SARS-CoV-2","CTCGATTGCATCCACT",6,166.21,10.21,-0.56,0.05,2.72,1,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","CTCGATTGTTCTTAGG",14,143.64,10.78,0.02,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCGATTTGTAAGAAC",1,15.72,9.85,-0.92,0.12,2.03,1.06,0.01,">1 nonsynonymous","S19R Q168R S200R",3
"lib1","SARS-CoV-2","CTCGCAAAACCTGGCA",2,11.49,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F62S V77P K94H G146C C158P",5
"lib1","SARS-CoV-2","CTCGCAAATAAAAGCG",8,2.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","CTCGCAAGAAGATTCC",1,19.43,8.56,-2.21,0.2,1.93,1.2,0.02,">1 nonsynonymous","C6N Q168C",2
"lib1","SARS-CoV-2","CTCGCAATACTACAAA",7,179.09,9.15,-1.61,0.17,1.5,1.02,0.01,">1 nonsynonymous","N58D D90L T100N Y178T",4
"lib1","SARS-CoV-2","CTCGCAATGAACAAGC",2,78.86,9.31,-1.45,0.05,2.77,1.11,0,"1 nonsynonymous","G146E",1
"lib1","SARS-CoV-2","CTCGCAATTAAAAATC",3,5.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39F L111T F134T",3
"lib1","SARS-CoV-2","CTCGCAATTACGAAAT",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I A105V N120H",3
"lib1","SARS-CoV-2","CTCGCACTAACGTACT",3,10.58,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G9L C49T L60G L95M P149K",5
"lib1","SARS-CoV-2","CTCGCAGTCGGTAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* V52M L57F E186G",4
"lib1","SARS-CoV-2","CTCGCATAATGCTTAT",6,3.39,NA,NA,NA,NA,NA,NA,"stop","C6G Y35* D112A I138R G155N",5
"lib1","SARS-CoV-2","CTCGCCATTGATTTGG",3,13.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7L C49L K132M E141L Y165W",5
"lib1","SARS-CoV-2","CTCGCCGTATTAGGGT",4,21,10.68,-0.08,0.09,2.81,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCGCCGTGGTTTCTA",1,7.02,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","A14Y A33K P133Y F167L",4
"lib1","SARS-CoV-2","CTCGCCTCGTAGGCGA",9,109.78,10.81,0.04,0.07,2.91,1.01,0,">1 nonsynonymous","N130H T148V",2
"lib1","SARS-CoV-2","CTCGCGAATCACGATG",2,88.2,10.8,0.03,0.09,2.88,1.06,0,"1 nonsynonymous","T46H",1
"lib1","SARS-CoV-2","CTCGCGATTGGAAATT",1,20.31,10.23,-0.53,0.12,2.51,1,0.01,">1 nonsynonymous","D90T S184F T201G",3
"lib1","SARS-CoV-2","CTCGCGATTTAAAAAT",11,256.03,10.01,-0.76,0.07,2.63,1.02,0,">1 nonsynonymous","S45T E141S L162M",3
"lib1","SARS-CoV-2","CTCGCGCTCCTCGTAC",10,154.3,10.42,-0.34,0.07,2.76,1.04,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","CTCGCGTTATCGATTC",5,70.3,10.47,-0.29,0.05,2.89,1.04,0,">1 nonsynonymous","K48L E141I Q163L P197C",4
"lib1","SARS-CoV-2","CTCGCTAAAGTTGTGC",5,61.03,10.78,0.01,0.06,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CTCGCTAATCACTTGA",6,27.17,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F99N C102F",2
"lib1","SARS-CoV-2","CTCGCTAATTCAGCGG",4,7.46,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R27T D59W T100P",3
"lib1","SARS-CoV-2","CTCGCTACTTATACTA",2,7.09,9.21,-1.56,0.35,1.58,1.18,0.05,">1 nonsynonymous","P54G N64V D90I",3
"lib1","SARS-CoV-2","CTCGCTAGAAAAGTGG",1,13.96,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","A18L S36M Y91P N171A",4
"lib1","SARS-CoV-2","CTCGCTCCTTAGTACG",5,347.4,9.8,-0.96,0.07,2.76,1.06,0,">1 nonsynonymous","D59T Q176H",2
"lib1","SARS-CoV-2","CTCGCTTCAAAAAAAG",5,65.79,9.14,-1.63,0.09,1.95,1.1,0,">1 nonsynonymous","F12T A145T",2
"lib1","SARS-CoV-2","CTCGCTTCTAGACGAG",4,82.8,10.29,-0.48,0.07,2.84,1.04,0,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","CTCGGAAAGCCCAGTT",1,87.9,10.61,-0.16,0.05,2.91,1.06,0,"1 nonsynonymous","S108T",1
"lib1","SARS-CoV-2","CTCGGAACCAATCAAA",5,48.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90G C102V S139K S184F",4
"lib1","SARS-CoV-2","CTCGGAATGGACAAAT",12,162.87,9.13,-1.64,0.08,2.31,1.11,0,">1 nonsynonymous","K114T P161Q",2
"lib1","SARS-CoV-2","CTCGGACAGGGTACAA",1,4.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","CTCGGACGCATCTATA",5,97.56,10.4,-0.36,0.06,2.94,1.02,0,">1 nonsynonymous","N30A A42T",2
"lib1","SARS-CoV-2","CTCGGACTGAGAGATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T S41G V173R",3
"lib1","SARS-CoV-2","CTCGGAGATTTTGACG",16,185.93,10.7,-0.07,0.05,2.88,1.04,0,"1 nonsynonymous","A33Q",1
"lib1","SARS-CoV-2","CTCGGAGGAATGTGTC",10,65.16,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","A14G G101F R124Q N151T P197N",5
"lib1","SARS-CoV-2","CTCGGAGTGAAGGAGG",2,22.44,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A81G D90A D112Q",3
"lib1","SARS-CoV-2","CTCGGATAACATAAAC",3,0.55,NA,NA,NA,NA,NA,NA,"stop","L183*",1
"lib1","SARS-CoV-2","CTCGGATAGTGCCACC",1,13.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I Y91L N107H",3
"lib1","SARS-CoV-2","CTCGGATGAATAAATG",7,22.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I72K V77L F126S S184D",4
"lib1","SARS-CoV-2","CTCGGATGAGTCTGAT",1,48.95,10.78,0.02,0.05,2.89,1.08,0,"1 nonsynonymous","N130M",1
"lib1","SARS-CoV-2","CTCGGATGTTTTATCC",3,32.96,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","F8C G74K A105M G146T",4
"lib1","SARS-CoV-2","CTCGGATTGAAACAAG",2,49.13,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","I88D E141M",2
"lib1","SARS-CoV-2","CTCGGATTGATAACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R V103P Y119V",3
"lib1","SARS-CoV-2","CTCGGCCCGTAATAGT",2,99,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L38P G116R F126V",3
"lib1","SARS-CoV-2","CTCGGCTCATGTCTAG",8,253.41,8.61,-2.15,0.1,2.78,1.08,0,"1 nonsynonymous","I142G",1
"lib1","SARS-CoV-2","CTCGGCTCGTCAAATG",3,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R V103P V115L E141M",4
"lib1","SARS-CoV-2","CTCGGGACCAACGATC",8,87.69,9.36,-1.4,0.12,2.43,1.13,0,">1 nonsynonymous","V65G A145I P149R",3
"lib1","SARS-CoV-2","CTCGGGCACAAGAATA",2,65.11,10.5,-0.26,0.04,2.95,1.03,0,">1 nonsynonymous","Y50F T63Y",2
"lib1","SARS-CoV-2","CTCGGGCACCAAGTTT",3,62.3,10.83,0.07,0.06,2.96,1,0,">1 nonsynonymous","I2V K94H",2
"lib1","SARS-CoV-2","CTCGGGTCATCTAACT",17,3.56,NA,NA,NA,NA,NA,NA,"stop","I28M G86* A105K G116V G172L",5
"lib1","SARS-CoV-2","CTCGGGTCTATAATTC",2,5.78,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","CTCGGGTGAAGCAGAG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","T15C Q84R Y159*",3
"lib1","SARS-CoV-2","CTCGGGTTGCAAACGT",2,42.39,10.81,0.05,0.08,2.82,1.15,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","CTCGGGTTTAGCAACT",12,214.33,10.68,-0.08,0.05,2.86,1.05,0,">1 nonsynonymous","K48N S139G",2
"lib1","SARS-CoV-2","CTCGGTAACGCAGGCT",7,291.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P82T R127W G146D Q176V",4
"lib1","SARS-CoV-2","CTCGGTCAAGTATATG",6,76.13,10.75,-0.01,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCGGTCTTAAGATCA",1,6.62,9.46,-1.3,0.34,2.6,1.36,0.05,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","CTCGGTGGCAAAGTCC",4,34.49,8.25,-2.51,0.16,1.5,1.09,0.01,">1 nonsynonymous","G86C E154R",2
"lib1","SARS-CoV-2","CTCGGTGTGTGTGTAT",3,43,8.55,-2.21,0.12,2.25,1.09,0.01,">1 nonsynonymous","N40A K48S G174V",3
"lib1","SARS-CoV-2","CTCGGTTCAGATCACA",3,16.78,10.42,-0.34,0.1,2.82,1.01,0,">1 nonsynonymous","L57S L122T",2
"lib1","SARS-CoV-2","CTCGTAAAGGCTCAAG",3,35,10.86,0.1,0.07,2.88,1.07,0,">1 nonsynonymous","N1V S129R V173L",3
"lib1","SARS-CoV-2","CTCGTAAATCGCATAG",14,197.58,9.98,-0.79,0.08,2.49,1.04,0,">1 nonsynonymous","L5M K26M F44Q C61L",4
"lib1","SARS-CoV-2","CTCGTAACACATGAGT",8,103.35,9.91,-0.86,0.08,2.64,1.03,0,">1 nonsynonymous","L38R L122S",2
"lib1","SARS-CoV-2","CTCGTAACCCGAATAA",3,56.14,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","P96M S139L P177Y",3
"lib1","SARS-CoV-2","CTCGTAATGCCCTAGC",1,0.41,NA,NA,NA,NA,NA,NA,"stop","K56L I104F F167*",3
"lib1","SARS-CoV-2","CTCGTAATTTATACAA",7,31,6.12,-4.65,1.39,1.5,1.26,0.06,">1 nonsynonymous","T3F A18T F126E T170M",4
"lib1","SARS-CoV-2","CTCGTACCTTGTAATA",4,94.5,10.77,0.01,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCGTACGTAAGCCTA",3,21.79,9.7,-1.06,0.17,1.72,1.09,0.01,">1 nonsynonymous","W106V P149Y",2
"lib1","SARS-CoV-2","CTCGTACTAATACAAT",3,32.23,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3L S41A L122C G152F Y159N",5
"lib1","SARS-CoV-2","CTCGTACTTGCGGCAG",5,0.76,NA,NA,NA,NA,NA,NA,"stop","Y119* K128S G146W G166I",4
"lib1","SARS-CoV-2","CTCGTAGGCTCCTATG",1,23.05,9.71,-1.05,0.1,2.49,1.04,0,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","CTCGTAGGTGATAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","D98L L162* V173K",3
"lib1","SARS-CoV-2","CTCGTAGTATCTGATC",2,2.65,NA,NA,NA,NA,NA,NA,"stop","E10S S36*",2
"lib1","SARS-CoV-2","CTCGTAGTGATTGTAG",2,18.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3D V37I D90M A105R S139L",5
"lib1","SARS-CoV-2","CTCGTAGTTACCTGGA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F Q176L",2
"lib1","SARS-CoV-2","CTCGTAGTTTGTTGTT",4,159.57,10.64,-0.13,0.04,2.95,1,0,"1 nonsynonymous","F156P",1
"lib1","SARS-CoV-2","CTCGTATAACCCTGCA",1,34.72,8.66,-2.11,0.22,1.65,1.06,0.02,">1 nonsynonymous","N107I S139T G146S",3
"lib1","SARS-CoV-2","CTCGTATCAAGTGAAA",4,37.76,10.79,0.02,0.1,2.91,1.06,0,">1 nonsynonymous","Y35L S129T T201R",3
"lib1","SARS-CoV-2","CTCGTATTACCTTCAT",2,42.28,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C49S A105V",2
"lib1","SARS-CoV-2","CTCGTCAAATTACCAA",7,1.71,NA,NA,NA,NA,NA,NA,"stop","T170*",1
"lib1","SARS-CoV-2","CTCGTCAAGAATGAAA",2,14.52,9.32,-1.44,0.13,2.7,1.03,0.01,">1 nonsynonymous","A42S G146F",2
"lib1","SARS-CoV-2","CTCGTCAATATAAATT",11,94.38,6.55,-4.21,0.42,1.5,1.19,0.02,">1 nonsynonymous","C6W N40E Y91A",3
"lib1","SARS-CoV-2","CTCGTCACGAATTCAA",1,13.83,10.73,-0.03,0.1,2.99,1.02,0,">1 nonsynonymous","R16N K132R",2
"lib1","SARS-CoV-2","CTCGTCACTGCCTAAC",4,50.41,8.4,-2.36,0.23,1.5,1.12,0.02,">1 nonsynonymous","G9L Y35F K94E",3
"lib1","SARS-CoV-2","CTCGTCACTTCTTCCA",3,102.26,9.82,-0.95,0.1,2.18,1.02,0,">1 nonsynonymous","G9W C61F G83W",3
"lib1","SARS-CoV-2","CTCGTCAGAATATAAA",2,12.48,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","Y35V Q84W K94E S139C",4
"lib1","SARS-CoV-2","CTCGTCATCCGGCTGC",10,23.2,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","A33T N92V Y121M I138L A190Y",5
"lib1","SARS-CoV-2","CTCGTCCGAAGTTAAA",2,62.13,9.82,-0.94,0.12,2.26,1.05,0.01,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","CTCGTCGTTTCCACCA",1,8.06,7.08,-3.69,0.37,1.5,1.23,0.04,">1 nonsynonymous","N64H C150Y",2
"lib1","SARS-CoV-2","CTCGTCTTCTCAACCA",1,71.71,9.43,-1.33,0.19,2.13,1.2,0.01,">1 nonsynonymous","V65Y V173G",2
"lib1","SARS-CoV-2","CTCGTGACCTAAATAA",1,25.55,9.98,-0.78,0.22,1.88,1.02,0.02,">1 nonsynonymous","T3F D59Q K94S V173K",4
"lib1","SARS-CoV-2","CTCGTTAAAGCAACAT",3,50.86,8.51,-2.25,0.17,2.59,1.1,0.01,">1 nonsynonymous","K132H N157F",2
"lib1","SARS-CoV-2","CTCGTTAGTAATACAA",3,18.93,10.28,-0.48,0.04,2.89,1,0,">1 nonsynonymous","D34K T63S",2
"lib1","SARS-CoV-2","CTCGTTATTTATGTTC",7,59.11,10.08,-0.69,0.13,2.03,1,0.01,">1 nonsynonymous","G83R Y91S S129M",3
"lib1","SARS-CoV-2","CTCGTTCAAAACCGAT",3,46.41,10.54,-0.23,0.07,2.92,1,0,">1 nonsynonymous","C61S F160L",2
"lib1","SARS-CoV-2","CTCGTTCACTCATAAT",5,78.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4W S19T Q176E",3
"lib1","SARS-CoV-2","CTCGTTCCAGTGAACA",11,151.68,10.68,-0.08,0.05,2.91,1,0,">1 nonsynonymous","L5W T193I",2
"lib1","SARS-CoV-2","CTCGTTCTATAACACG",2,73.45,8.97,-1.79,0.11,1.74,1.2,0.01,"1 nonsynonymous","D137Q",1
"lib1","SARS-CoV-2","CTCGTTCTGCCGCTGC",7,265.73,10.72,-0.04,0.05,2.92,1.04,0,"1 nonsynonymous","G196D",1
"lib1","SARS-CoV-2","CTCGTTTCAAGTCATA",6,135.71,10.65,-0.12,0.04,2.89,1.05,0,">1 nonsynonymous","F134L A190Q",2
"lib1","SARS-CoV-2","CTCGTTTGGCTCCGGA",3,0,NA,NA,NA,NA,NA,NA,"stop","V37* Y50N P149I",3
"lib1","SARS-CoV-2","CTCTAAACTACTGGAC",4,3.92,NA,NA,NA,NA,NA,NA,"stop","V37R N130A G155*",3
"lib1","SARS-CoV-2","CTCTAAAGAAACATAA",5,57.17,9.99,-0.77,0.09,2.51,1.01,0,">1 nonsynonymous","A14Y S200F",2
"lib1","SARS-CoV-2","CTCTAAAGCCATAGAA",13,82.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62D V103H",2
"lib1","SARS-CoV-2","CTCTAAATCATTTTGG",2,24.69,7.91,-2.85,0.15,1.65,1.19,0.01,">1 nonsynonymous","V37I N92C G174L",3
"lib1","SARS-CoV-2","CTCTAAATTTCCAAAA",8,142.9,10.42,-0.34,0.04,2.9,1.04,0,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","CTCTAACAGCTATACA",7,196.23,10.37,-0.39,0.05,2.88,1.06,0,">1 nonsynonymous","N4G P54C",2
"lib1","SARS-CoV-2","CTCTAACATATCAAAA",3,24.55,10.83,0.06,0.17,2.8,1.01,0.01,"1 nonsynonymous","T55E",1
"lib1","SARS-CoV-2","CTCTAACATGCGCTGA",2,30.37,10.08,-0.68,0.14,2.35,1,0.01,">1 nonsynonymous","I28G Q163L",2
"lib1","SARS-CoV-2","CTCTAACCAAGAGACT",1,7.73,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95C N151S H189Y",3
"lib1","SARS-CoV-2","CTCTAACGAGTAAACC",4,51.93,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","I28P K48M R78V G83F V103R C195S T201W",7
"lib1","SARS-CoV-2","CTCTAACTGCAATGTA",7,140.17,9.26,-1.5,0.15,1.71,1.12,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","CTCTAACTGGTCTCGA",3,17.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K87G R179L",2
"lib1","SARS-CoV-2","CTCTAAGAAGCAAGGT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","C31A A42Q G86S G116* K128S",5
"lib1","SARS-CoV-2","CTCTAAGACAAAGTGA",2,11.72,6.37,-4.39,0.83,1.5,1.19,0.05,">1 nonsynonymous","L95Y G146A",2
"lib1","SARS-CoV-2","CTCTAAGACCAATCCC",5,38.82,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V77K N109F",2
"lib1","SARS-CoV-2","CTCTAAGAGTTGTTGT",10,82.92,9.95,-0.81,0.07,2.63,1.04,0,">1 nonsynonymous","S45L N130L",2
"lib1","SARS-CoV-2","CTCTAAGCTGTATCCG",4,22.54,6.03,-4.73,1.91,1.5,1.29,0.06,">1 nonsynonymous","F126N Q168L",2
"lib1","SARS-CoV-2","CTCTAAGTAAGGCGGA",4,10.69,7.44,-3.33,0.41,1.5,1.07,0.05,">1 nonsynonymous","C6A V103Q E135K",3
"lib1","SARS-CoV-2","CTCTAATAACTACGAA",9,98.28,6.05,-4.71,0.71,1.5,1.17,0.01,">1 nonsynonymous","K94Q R127E",2
"lib1","SARS-CoV-2","CTCTACAAAAAACTGG",2,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K I88C Y159H L183A",4
"lib1","SARS-CoV-2","CTCTACAAAGCCTGAG",9,1.68,NA,NA,NA,NA,NA,NA,"stop","G86* E135S E141M R179I L187I",5
"lib1","SARS-CoV-2","CTCTACAACTAGCCTG",1,8.78,6,-4.76,2,3,1.45,0.02,">1 nonsynonymous","D98G Y121R G166P",3
"lib1","SARS-CoV-2","CTCTACAAGCAGGGTT",3,30.98,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F134C G155T F185D",3
"lib1","SARS-CoV-2","CTCTACAAGGTATACG",12,233.96,10.63,-0.14,0.04,2.9,1.05,0,">1 nonsynonymous","Y143H K198V",2
"lib1","SARS-CoV-2","CTCTACAATAACTAAA",1,9.62,6.1,-4.67,1.6,1.5,1.15,0.02,">1 nonsynonymous","L131K V153G",2
"lib1","SARS-CoV-2","CTCTACACCAGAAGCA",4,54.02,7.06,-3.7,0.29,1.5,1.14,0.02,">1 nonsynonymous","T85Y Y165S",2
"lib1","SARS-CoV-2","CTCTACACTATGTAAC",13,1.01,NA,NA,NA,NA,NA,NA,"stop","A42* N58R S164V",3
"lib1","SARS-CoV-2","CTCTACAGGAGAACTC",5,64.57,10.5,-0.26,0.06,2.91,1.05,0,">1 nonsynonymous","P169S A190R",2
"lib1","SARS-CoV-2","CTCTACAGTCAAGTTA",2,24.52,9.44,-1.33,0.09,2.71,1.19,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","CTCTACATCAATGACA",6,86.54,10.53,-0.23,0.08,2.84,1.13,0,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","CTCTACATCCTTAATT",2,19.71,10.8,0.03,0.12,2.91,1.02,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","CTCTACATGAGCGTTA",2,83.72,10.08,-0.68,0.05,2.88,1.05,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","CTCTACCAATAACATC",2,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H K94S N110R L122K",4
"lib1","SARS-CoV-2","CTCTACCATTACCATT",2,17.3,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N4T D59P K87T A105L T148A Q163I K198T",7
"lib1","SARS-CoV-2","CTCTACCATTCTTAGA",1,53.02,10.77,0,0.07,2.88,1.07,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","CTCTACCCATGTTTAA",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106S D112Q Y165C",3
"lib1","SARS-CoV-2","CTCTACCCTTCAACGC",1,9.03,9.95,-0.81,0.1,2.46,1,0,">1 nonsynonymous","K26M R136A",2
"lib1","SARS-CoV-2","CTCTACCGGATGGGAA",1,10.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9V W106V L162W",3
"lib1","SARS-CoV-2","CTCTACGAATGAGGTT",5,32.38,6.38,-4.39,0.33,1.5,1.12,0.01,">1 nonsynonymous","G101S A145T C150S",3
"lib1","SARS-CoV-2","CTCTACGACAGGTCAT",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L Y91P L122S",3
"lib1","SARS-CoV-2","CTCTACGGGTACTAAC",2,8.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20E Y165H",2
"lib1","SARS-CoV-2","CTCTACGGTCTGATGG",7,1.63,NA,NA,NA,NA,NA,NA,"stop","G86R A89T L122* I138L G155P Q176S K198C",7
"lib1","SARS-CoV-2","CTCTACGTTACATGTA",1,8.5,8.68,-2.09,0.33,1.5,1,0.03,"1 nonsynonymous","E76R",1
"lib1","SARS-CoV-2","CTCTACTCGCTGAGCT",2,82.43,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41N L57S G116L R124S F160N T193Y V194G",7
"lib1","SARS-CoV-2","CTCTACTGTAGACTCC",2,42.09,10.08,-0.68,0.4,1.5,1,0.06,">1 nonsynonymous","C61K I72S D98Y L162T",4
"lib1","SARS-CoV-2","CTCTACTGTTAAGCAG",1,33.3,10.47,-0.29,0.07,2.93,1,0,">1 nonsynonymous","Y39F S45L",2
"lib1","SARS-CoV-2","CTCTACTTAAAATAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* K94R R124E P149L",4
"lib1","SARS-CoV-2","CTCTACTTTAGATGGA",2,1.37,NA,NA,NA,NA,NA,NA,"stop","A105* E141V",2
"lib1","SARS-CoV-2","CTCTAGACTTATATAA",3,39.94,8.65,-2.11,0.13,1.98,1.1,0.01,">1 nonsynonymous","C6Y K87Q D97Y",3
"lib1","SARS-CoV-2","CTCTAGATCACGTACT",6,57.01,10.8,0.03,0.06,2.91,1.06,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","CTCTAGCATTCGCATA",2,34.03,9.53,-1.23,0.08,2.8,1.06,0,">1 nonsynonymous","T85W Q168T",2
"lib1","SARS-CoV-2","CTCTAGCCTGTCAATA",7,45.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R G51Y I104S S139G",4
"lib1","SARS-CoV-2","CTCTAGCTAAACAAGG",2,16.87,10.91,0.14,0.08,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCTAGGAATAGGGCC",10,140.61,9.62,-1.14,0.09,2.59,1.11,0,">1 nonsynonymous","S41A F62G P169S",3
"lib1","SARS-CoV-2","CTCTAGGCACAACACC",4,41.51,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","T3Q N120Y I142K F160L Q168L",5
"lib1","SARS-CoV-2","CTCTAGGGAGCATGAA",4,48.8,10.2,-0.57,0.1,2.54,1.02,0,">1 nonsynonymous","K87Y W106L",2
"lib1","SARS-CoV-2","CTCTAGTAAACAAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34* V103* L125M P169L",4
"lib1","SARS-CoV-2","CTCTAGTATAAATGTA",3,57.11,9.38,-1.38,0.08,2.8,1.1,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","CTCTAGTGGAACAATG",4,17.85,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y39S Y66G N151I V173T",4
"lib1","SARS-CoV-2","CTCTAGTGTGACTCCG",2,36.02,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W23T A42F G51A L122M R124L A192T",6
"lib1","SARS-CoV-2","CTCTAGTTAAAACCTA",3,20.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53R G172E",2
"lib1","SARS-CoV-2","CTCTAGTTGAAGTTAG",10,228.42,8.47,-2.29,0.13,2.33,1.11,0.01,">1 nonsynonymous","T63G S113K",2
"lib1","SARS-CoV-2","CTCTAGTTGTATTCTA",4,28.32,9.61,-1.15,0.14,1.71,1.16,0.01,">1 nonsynonymous","P96C I104Y",2
"lib1","SARS-CoV-2","CTCTATAAATAGTGCA",4,44.68,10.68,-0.09,0.05,2.9,1.01,0,">1 nonsynonymous","D97L K128L",2
"lib1","SARS-CoV-2","CTCTATAATAATAGTG",7,77.34,10.77,0,0.08,2.92,1.03,0,"1 nonsynonymous","T140A",1
"lib1","SARS-CoV-2","CTCTATACCTTTACGC",4,209.82,10.44,-0.33,0.04,2.8,1.03,0,">1 nonsynonymous","G83R T140F",2
"lib1","SARS-CoV-2","CTCTATACTGCAACAT",6,55.4,8.22,-2.55,0.13,2.21,1.09,0.01,">1 nonsynonymous","C6Y Q168L",2
"lib1","SARS-CoV-2","CTCTATAGAAGCTAAC",1,13.21,6.25,-4.52,1.01,1.5,1.11,0.05,">1 nonsynonymous","F99A R136N",2
"lib1","SARS-CoV-2","CTCTATAGATGACTAA",8,33.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G101H W106R G155V F167L",4
"lib1","SARS-CoV-2","CTCTATATAAATACTA",1,10.6,8.16,-2.6,0.14,1.97,1.02,0.01,">1 nonsynonymous","S113P S129R",2
"lib1","SARS-CoV-2","CTCTATATAGAACAGG",10,121.59,10.65,-0.11,0.05,2.92,1.05,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","CTCTATATGGTTGCAA",4,25.54,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P7L G86D L95R K199C",4
"lib1","SARS-CoV-2","CTCTATCAAATCAGCC",9,85.25,10.54,-0.23,0.05,2.92,1.01,0,"1 nonsynonymous","S164L",1
"lib1","SARS-CoV-2","CTCTATCATGATATGT",8,35.94,9.27,-1.5,0.29,1.5,1,0.04,">1 nonsynonymous","F8P T55V G117A F160A",4
"lib1","SARS-CoV-2","CTCTATCCCTCTTACA",2,36.14,9.42,-1.34,0.11,2.65,1.12,0,">1 nonsynonymous","R27M S45D Y119T",3
"lib1","SARS-CoV-2","CTCTATCTATACTAGA",2,85.17,9.15,-1.61,0.12,2.41,1.17,0.01,">1 nonsynonymous","I2S G9L I142K",3
"lib1","SARS-CoV-2","CTCTATCTTAAACGCG",3,49.51,10.54,-0.23,0.06,2.88,1.04,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","CTCTATGAGTCTGGCC",4,8.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D97N P161I Q168V",3
"lib1","SARS-CoV-2","CTCTATGATCTTGACG",1,5.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77K R124F",2
"lib1","SARS-CoV-2","CTCTATGGAGGAACCA",4,61.24,6,-4.76,1.07,1.5,1.21,0.01,">1 nonsynonymous","G83S P96H W106S E135D P149Q G152D V173G",7
"lib1","SARS-CoV-2","CTCTATGGTTAACCGC",2,34.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41A I80N",2
"lib1","SARS-CoV-2","CTCTATGTAATCTAAA",7,170.66,10.64,-0.12,0.05,2.89,1.04,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","CTCTATTATCAATTTA",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K K87S D98I",3
"lib1","SARS-CoV-2","CTCTATTCAAAACCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","C61L K114L N171*",3
"lib1","SARS-CoV-2","CTCTATTTAGATCAAA",3,59.69,10.81,0.05,0.07,2.95,1.02,0,">1 nonsynonymous","R16T N58H",2
"lib1","SARS-CoV-2","CTCTATTTCCAGTGTA",1,9.3,10.19,-0.57,0.07,2.9,1,0,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","CTCTCAAAAAAATGAA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","F8H G83Y Y119* S200*",4
"lib1","SARS-CoV-2","CTCTCAAAACTAAGCG",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A L95Y F167I",3
"lib1","SARS-CoV-2","CTCTCAAAAGAGAAAT",6,57.97,10.69,-0.07,0.05,2.89,1.04,0,"1 nonsynonymous","K94R",1
"lib1","SARS-CoV-2","CTCTCAAACCCAATTA",4,28.05,10.83,0.07,0.1,2.76,1.01,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","CTCTCAAATCACTGCG",1,19.92,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T85P F99H",2
"lib1","SARS-CoV-2","CTCTCAACCAAAATCA",3,23.08,6.41,-4.35,0.36,1.5,1.1,0.01,">1 nonsynonymous","N4G D68V N92M S113Q P161C",5
"lib1","SARS-CoV-2","CTCTCAACCATGAAGT",2,64.02,9.17,-1.6,0.09,2.28,1.16,0,">1 nonsynonymous","K87P N120Y R127A",3
"lib1","SARS-CoV-2","CTCTCAAGACAGCTTA",3,99.81,10.2,-0.56,0.07,2.77,1,0,">1 nonsynonymous","P7F F99W",2
"lib1","SARS-CoV-2","CTCTCAAGCTCGCTGG",2,49.72,9.94,-0.83,0.13,2.23,1.12,0.01,">1 nonsynonymous","P7T V20A T100Y",3
"lib1","SARS-CoV-2","CTCTCAATAGCGCCTT",13,74.4,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S41K F99L W106R S147F",4
"lib1","SARS-CoV-2","CTCTCACATTTCAACC",1,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32S K114L",2
"lib1","SARS-CoV-2","CTCTCACGGCCTGACG",5,119.33,8.74,-2.03,0.13,2.19,1.13,0.01,">1 nonsynonymous","C61H S129Y Q144S G152C",4
"lib1","SARS-CoV-2","CTCTCACTAAGACTTG",3,25.98,10.71,-0.06,0.07,2.97,1.01,0,">1 nonsynonymous","C61G L188V",2
"lib1","SARS-CoV-2","CTCTCACTTGAGTCCC",2,58.49,10.06,-0.71,0.06,2.77,1.02,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","CTCTCACTTGCCAAGG",7,237.38,10.5,-0.26,0.04,2.87,1.05,0,"1 nonsynonymous","D34N",1
"lib1","SARS-CoV-2","CTCTCAGATCAATTTT",1,14.55,6,-4.76,2,3,1.16,0,">1 nonsynonymous","S69N I104S V173S",3
"lib1","SARS-CoV-2","CTCTCAGGCAGTATAG",1,19.64,10.16,-0.61,0.14,2.44,1.13,0.01,">1 nonsynonymous","L5F N13R D90Q",3
"lib1","SARS-CoV-2","CTCTCAGGTTGGATCC",6,37.17,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P7N R124H L183T",3
"lib1","SARS-CoV-2","CTCTCATAGAACCAAA",3,54.71,10.19,-0.57,0.08,2.73,1.05,0,"1 nonsynonymous","S139F",1
"lib1","SARS-CoV-2","CTCTCATATTGAGTAG",6,87.47,8.83,-1.94,0.12,1.5,1.13,0.01,"1 nonsynonymous","I28D",1
"lib1","SARS-CoV-2","CTCTCATTTTAGCAGG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72N G117F L125R",3
"lib1","SARS-CoV-2","CTCTCCAATACCCTAT",2,80.73,6,-4.76,0.95,1.5,1.13,0,">1 nonsynonymous","C6N A67V K87L G101A N120T",5
"lib1","SARS-CoV-2","CTCTCCACCTGCTAAG",3,0.49,NA,NA,NA,NA,NA,NA,"stop","W106C Y143* G152N",3
"lib1","SARS-CoV-2","CTCTCCACGAAAGATA",1,26.21,9.07,-1.7,0.18,2.2,1.13,0.01,">1 nonsynonymous","V11M G155I",2
"lib1","SARS-CoV-2","CTCTCCACTATAATAG",2,24,6.37,-4.4,0.48,1.5,1.16,0.02,">1 nonsynonymous","K94E K128L",2
"lib1","SARS-CoV-2","CTCTCCATATCAGCTT",1,48.09,10.15,-0.62,0.06,2.78,1.02,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","CTCTCCATGAAGACGC",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","CTCTCCATGGTCTTGT",7,64.86,6,-4.76,1.94,1.5,1.23,0.02,">1 nonsynonymous","T55H A81V T85H K94P",4
"lib1","SARS-CoV-2","CTCTCCCAATCGAACG",1,14.05,10.71,-0.06,0.09,2.87,1,0,">1 nonsynonymous","N4M D75K",2
"lib1","SARS-CoV-2","CTCTCCGTTGGTCAAA",1,10.79,9.5,-1.26,0.22,1.5,1.08,0.02,">1 nonsynonymous","N13C I28M D97R K132N S139N",5
"lib1","SARS-CoV-2","CTCTCCTAATGACTCG",2,64.5,10.55,-0.21,0.07,2.91,1,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","CTCTCCTGTGGGCGCG",8,22.21,8.89,-1.87,0.24,1.87,1.3,0.02,">1 nonsynonymous","A42Y P54L D90Y L162F",4
"lib1","SARS-CoV-2","CTCTCGAACGAATCCC",3,76.72,10.8,0.04,0.07,2.9,1.07,0,"1 nonsynonymous","L5N",1
"lib1","SARS-CoV-2","CTCTCGAACTATTTTA",4,62.91,10.61,-0.16,0.03,2.9,1.03,0,"1 nonsynonymous","A33I",1
"lib1","SARS-CoV-2","CTCTCGAAGATGCATA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15C Q84R Y159*",3
"lib1","SARS-CoV-2","CTCTCGAGGTGCGAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib1","SARS-CoV-2","CTCTCGATGTTTCAAC",2,12.66,6,-4.76,1.74,1.5,1.02,0,">1 nonsynonymous","I88R P96H L125N N130A",4
"lib1","SARS-CoV-2","CTCTCGCAGAATAACC",5,3.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","CTCTCGCAGCTGACGC",4,32.64,7.01,-3.76,0.37,1.5,1.23,0.02,">1 nonsynonymous","C6V V11Y F62S P96T",4
"lib1","SARS-CoV-2","CTCTCGTACAACTCAA",8,4.56,NA,NA,NA,NA,NA,NA,"stop","F62* S164W",2
"lib1","SARS-CoV-2","CTCTCGTCCGGACACA",3,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22W D34P I88P L95R V115F F134S Q144R",7
"lib1","SARS-CoV-2","CTCTCGTTATGCTTAA",10,64.5,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10P G74T D97L H189C",4
"lib1","SARS-CoV-2","CTCTCTAACAACATCT",2,20.56,6,-4.76,2,3,1.04,0,">1 nonsynonymous","I2L Y39P N92L W106R L122A N130H E141D N157C",8
"lib1","SARS-CoV-2","CTCTCTAAGCGAGCCT",7,521.15,10.77,0.01,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCTCTACAAATGATG",1,11.02,10.46,-0.31,0.24,2.76,1.21,0.03,">1 nonsynonymous","G9N V37S E141A",3
"lib1","SARS-CoV-2","CTCTCTAGAACGCCAG",2,160.1,9.67,-1.1,0.09,2.64,1.06,0,">1 nonsynonymous","F44E E154V",2
"lib1","SARS-CoV-2","CTCTCTATATTGAGGA",2,83.09,10.32,-0.45,0.04,2.83,1.01,0,">1 nonsynonymous","Y91K T201M",2
"lib1","SARS-CoV-2","CTCTCTATTAAGCAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L V32*",2
"lib1","SARS-CoV-2","CTCTCTCAAAAAAATA",1,27.49,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A67L L95W Y119K",3
"lib1","SARS-CoV-2","CTCTCTCATAACAGGA",6,18.47,6,-4.76,1.19,1.5,1.11,0.02,">1 nonsynonymous","A14E Y91T A145D L183F",4
"lib1","SARS-CoV-2","CTCTCTGAGCCCTATT",4,65.79,8.47,-2.29,0.16,1.77,1.16,0.01,">1 nonsynonymous","F99Y G116K A145T T201C",4
"lib1","SARS-CoV-2","CTCTCTGATGCACACC",3,25.05,6.22,-4.54,1.08,1.5,1.2,0.06,">1 nonsynonymous","V77M R124G Q144R K198Q",4
"lib1","SARS-CoV-2","CTCTCTTGAATAACTA",3,2.44,NA,NA,NA,NA,NA,NA,"stop","T55* N92S K132L E141T Y175T",5
"lib1","SARS-CoV-2","CTCTCTTTGACTAATT",2,32.55,6.6,-4.17,0.67,1.5,1.25,0.05,">1 nonsynonymous","N4S R25M F44H T170R",4
"lib1","SARS-CoV-2","CTCTCTTTTTAGAATG",4,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I N40P K87Y F134C",4
"lib1","SARS-CoV-2","CTCTGAAAAATACCAC",1,9.49,10.32,-0.44,0.14,2.79,1.14,0.01,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","CTCTGAAAACGTCACT",3,0.25,NA,NA,NA,NA,NA,NA,"stop","C6* V77K T201N",3
"lib1","SARS-CoV-2","CTCTGAAAGTCTTAAA",1,6.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103Q F134N G166R",3
"lib1","SARS-CoV-2","CTCTGAAATTACGTGG",3,17.36,6.15,-4.62,0.92,1.5,1.22,0.03,">1 nonsynonymous","C49R R73F A81S D90L C102G Y119L",6
"lib1","SARS-CoV-2","CTCTGAACCATCCTAG",1,6.96,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F17S F44L N120W G166W",4
"lib1","SARS-CoV-2","CTCTGAACTGCTACCA",2,40.06,10.6,-0.17,0.1,2.65,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTCTGAAGCTTAGTGA",6,66.78,8.8,-1.97,0.05,2.76,1.17,0,"1 nonsynonymous","G146C",1
"lib1","SARS-CoV-2","CTCTGAAGCTTTCGTA",3,121.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1S Y165P Y175A",3
"lib1","SARS-CoV-2","CTCTGAATCAATAATA",5,102.59,7.41,-3.35,0.26,1.5,1.11,0.02,">1 nonsynonymous","N4I T85R Y91M D97N G166K",5
"lib1","SARS-CoV-2","CTCTGAATCCCTAGAG",7,139.13,9.8,-0.97,0.03,2.89,1.03,0,">1 nonsynonymous","K114S K128I G174K K199I",4
"lib1","SARS-CoV-2","CTCTGAATGCGTAACA",4,6.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42L A89R L183Q",3
"lib1","SARS-CoV-2","CTCTGAATTAAGAATA",1,14.49,8.87,-1.9,0.25,1.5,1.09,0.03,">1 nonsynonymous","F12N K128V",2
"lib1","SARS-CoV-2","CTCTGACACTGGCTCG",5,59.1,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P82F E135T",2
"lib1","SARS-CoV-2","CTCTGACATATCCCAG",6,29.7,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C49I I142S",2
"lib1","SARS-CoV-2","CTCTGACATGGTAAGG",2,51.13,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F99V N157L",2
"lib1","SARS-CoV-2","CTCTGACTTAGACGAA",1,1.35,NA,NA,NA,NA,NA,NA,"stop","S69G P82H G116S Y123H N130L C158*",6
"lib1","SARS-CoV-2","CTCTGAGAAATCAAAA",3,40.52,10.8,0.03,0.09,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCTGAGAGTTCCGAT",1,13.17,6,-4.76,2,3,1.08,0.03,">1 nonsynonymous","A14R T85A K114W Y121P E135V",5
"lib1","SARS-CoV-2","CTCTGATAAACCTAGG",4,133.54,10.35,-0.42,0.04,2.96,1,0,">1 nonsynonymous","K132R S139D V173D A190T C195R",5
"lib1","SARS-CoV-2","CTCTGATACATACTTC",1,15.43,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","R25Y",1
"lib1","SARS-CoV-2","CTCTGATGGATCGCGT",4,5.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49L Y143L",2
"lib1","SARS-CoV-2","CTCTGCAATACGTATA",1,13.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15F F44M S53Y V65C F99C",5
"lib1","SARS-CoV-2","CTCTGCTATGAAATAG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","T100K K132C C158* G166C Y178V L187P A190S T201L",8
"lib1","SARS-CoV-2","CTCTGGAACCCATGAC",1,8.63,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C6S F70Q Q84K P96L C150R",5
"lib1","SARS-CoV-2","CTCTGGAGGAGTCGAT",4,0,NA,NA,NA,NA,NA,NA,"stop","A33R S41P T148Y V173*",4
"lib1","SARS-CoV-2","CTCTGGAGGTACTGAT",2,166.16,10.7,-0.07,0.08,2.78,1.04,0,">1 nonsynonymous","Y91L S147P",2
"lib1","SARS-CoV-2","CTCTGGAGTTCCAAAA",3,49.66,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","C49L A89Y L131K I142V",4
"lib1","SARS-CoV-2","CTCTGGATAACAACAA",7,23.25,10.17,-0.6,0.14,2.65,1,0.01,">1 nonsynonymous","T46I K56P",2
"lib1","SARS-CoV-2","CTCTGGTACCTTTTTT",6,12.97,7.14,-3.63,0.51,1.5,1,0.07,">1 nonsynonymous","L5V V103S Y159S",3
"lib1","SARS-CoV-2","CTCTGGTTTATGACGA",2,141.92,8.69,-2.07,0.08,2.63,1.07,0,">1 nonsynonymous","I2Q E10N A89S V115H F126H",5
"lib1","SARS-CoV-2","CTCTGTAATGCAAACA",4,89.61,7.91,-2.85,0.14,1.81,1.15,0.01,">1 nonsynonymous","S36D F99Y R136M F156E",4
"lib1","SARS-CoV-2","CTCTGTATATAAGAAG",2,1.58,NA,NA,NA,NA,NA,NA,"stop","K56S Q84R D90* A105T R179Y",5
"lib1","SARS-CoV-2","CTCTGTATTATAAGTA",2,30.85,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S43P F99S N107W S139A",4
"lib1","SARS-CoV-2","CTCTGTGAATCCCACC",2,19.55,9.85,-0.91,0.12,2.04,1,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","CTCTGTTAACGACCCT",5,86.93,9.41,-1.36,0.13,2.23,1.11,0.01,">1 nonsynonymous","P54G L60Q I104L S129R P169L",5
"lib1","SARS-CoV-2","CTCTTAAAAAAAAATA",3,32.96,9.05,-1.71,0.18,1.67,1.18,0.01,"1 nonsynonymous","F8R",1
"lib1","SARS-CoV-2","CTCTTAAAAGACGCCA",3,66.77,9.96,-0.81,0.07,2.09,1.05,0,">1 nonsynonymous","V37F D68M K128V",3
"lib1","SARS-CoV-2","CTCTTAAAATCGTAAA",1,29.17,10.27,-0.5,0.08,2.8,1.05,0,">1 nonsynonymous","S36R D59E V71L",3
"lib1","SARS-CoV-2","CTCTTAAAATTATAAC",15,34.03,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50K I104G",2
"lib1","SARS-CoV-2","CTCTTAAAGACAATAA",1,6,9.77,-1,0.19,2.02,1.08,0.01,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","CTCTTAACTATCATAC",2,27.21,10.45,-0.32,0.1,2.78,1.07,0,"1 nonsynonymous","N24I",1
"lib1","SARS-CoV-2","CTCTTAACTTACAACT",3,187.91,9.98,-0.78,0.08,2.33,1.03,0,">1 nonsynonymous","S36Y Q176N",2
"lib1","SARS-CoV-2","CTCTTAACTTTCATGC",4,56.12,9.78,-0.99,0.12,2.09,1.07,0.01,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","CTCTTAAGGAGAATGA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L T170F",2
"lib1","SARS-CoV-2","CTCTTAATATAAGAAT",3,1.38,NA,NA,NA,NA,NA,NA,"stop","L5A T85K K114* N120M C150S P161Y",6
"lib1","SARS-CoV-2","CTCTTAATCGGATAAT",4,28.09,6,-4.76,1.42,3,1.17,0,">1 nonsynonymous","S41P S69E N107P Q176E",4
"lib1","SARS-CoV-2","CTCTTAATTGTATTTA",2,41.52,9.87,-0.9,0.06,2.94,1.01,0,"1 nonsynonymous","N157D",1
"lib1","SARS-CoV-2","CTCTTACAAATGATGA",3,61.17,6,-4.76,0.45,2.35,1.06,0,">1 nonsynonymous","K128E F167S",2
"lib1","SARS-CoV-2","CTCTTACAAGAAAGTT",2,13.47,8.75,-2.02,0.4,1.5,1.03,0.07,">1 nonsynonymous","N1H N40Y D98V S164L",4
"lib1","SARS-CoV-2","CTCTTACAGCCAGGCA",4,52.01,10.46,-0.3,0.06,2.9,1.04,0,">1 nonsynonymous","C61L S129I",2
"lib1","SARS-CoV-2","CTCTTACGGAACTGTT",3,137.87,8.43,-2.34,0.15,2.65,1.11,0.01,">1 nonsynonymous","T85F L125P F156S",3
"lib1","SARS-CoV-2","CTCTTACTAAAATACG",2,44.86,10.75,-0.02,0.06,2.88,1.06,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","CTCTTAGCTGAAGAAC",2,26.47,9.03,-1.73,0.27,1.5,1,0.03,"1 nonsynonymous","W23K",1
"lib1","SARS-CoV-2","CTCTTAGGAGATTACA",4,40.64,9.73,-1.03,0.13,1.99,1.09,0.01,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","CTCTTAGTCTCAAAAC",12,192.08,10.07,-0.69,0.06,2.77,1.03,0,">1 nonsynonymous","Y121M K128V",2
"lib1","SARS-CoV-2","CTCTTATAATGAATTT",8,79.21,6.39,-4.38,0.63,1.5,1.13,0.04,">1 nonsynonymous","L5T V65K P96S G101V V173F P177R",6
"lib1","SARS-CoV-2","CTCTTATACAGCAGAA",3,120.89,9.25,-1.51,0.09,2.84,1.13,0,">1 nonsynonymous","S41N Y119W P169K",3
"lib1","SARS-CoV-2","CTCTTATATTCATTTT",3,0.37,NA,NA,NA,NA,NA,NA,"stop","S113* P169*",2
"lib1","SARS-CoV-2","CTCTTATCAATTAAAG",1,33.76,10.18,-0.58,0.11,2.64,1,0.01,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","CTCTTATGTATCACCT",5,54.1,10.39,-0.37,0.06,2.88,1.01,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","CTCTTATTTACGAATA",2,17.16,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T63N D112F G166T G172C",4
"lib1","SARS-CoV-2","CTCTTCAAAAAAACGG",2,14.45,10.42,-0.34,0.08,2.9,1.03,0,"1 nonsynonymous","S45G",1
"lib1","SARS-CoV-2","CTCTTCACAGGTAATT",3,25.81,10.24,-0.53,0.12,2.07,1.07,0.01,">1 nonsynonymous","S43T F99V",2
"lib1","SARS-CoV-2","CTCTTCACATTCCAAC",8,159.32,10.08,-0.68,0.08,2.49,1.04,0,">1 nonsynonymous","G9P T63W",2
"lib1","SARS-CoV-2","CTCTTCACCATCCTCA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","K56R L122*",2
"lib1","SARS-CoV-2","CTCTTCACTTGGCAGT",1,14.89,9.98,-0.79,0.1,2.03,1.03,0.01,">1 nonsynonymous","R27A F47R",2
"lib1","SARS-CoV-2","CTCTTCAGAACTGCAT",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123S C150I L183F",3
"lib1","SARS-CoV-2","CTCTTCAGCCGTTCCA",3,42.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D90P D98E K128E I142H G174R",5
"lib1","SARS-CoV-2","CTCTTCATTAGATCTA",2,256.92,10.71,-0.06,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCTTCCAACTGATAG",2,28.68,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S45A N92V L131A",3
"lib1","SARS-CoV-2","CTCTTCCACGATAGCT",1,22.46,10.45,-0.32,0.11,2.97,1,0,">1 nonsynonymous","L5T G9T D59T F160G",4
"lib1","SARS-CoV-2","CTCTTCGAACATAACC",1,43.58,9.87,-0.9,0.13,2.21,1.02,0.01,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","CTCTTCGCGTGTTAGC",1,0.42,NA,NA,NA,NA,NA,NA,"stop","K87* V103W L122S",3
"lib1","SARS-CoV-2","CTCTTCGTACCGGCTA",1,19.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P54R V65S V71S",3
"lib1","SARS-CoV-2","CTCTTCTCCCGACGCG",10,205.2,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41L I88R R124V Q176S",4
"lib1","SARS-CoV-2","CTCTTCTCCGCACAAT",7,2.01,NA,NA,NA,NA,NA,NA,"stop","A89V Q163S Y178F T201*",4
"lib1","SARS-CoV-2","CTCTTCTCGTGGCAGC",1,11.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y121S R136N",2
"lib1","SARS-CoV-2","CTCTTCTGAACCCCGC",5,57.89,6.39,-4.38,0.51,1.5,1.11,0.02,">1 nonsynonymous","A89C D112Q",2
"lib1","SARS-CoV-2","CTCTTCTTTCCCATGA",2,9.17,10.39,-0.37,0.15,2.68,1,0.01,">1 nonsynonymous","T15F S41L",2
"lib1","SARS-CoV-2","CTCTTGAACAAGTTCC",1,17.18,7.17,-3.59,0.27,2.14,1.09,0.03,">1 nonsynonymous","D59L K87A G116I N151P",4
"lib1","SARS-CoV-2","CTCTTGAATTTATATA",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P V173L",2
"lib1","SARS-CoV-2","CTCTTGCACTACAACT",4,0.45,NA,NA,NA,NA,NA,NA,"stop","V11A P82K Y119W E135*",4
"lib1","SARS-CoV-2","CTCTTGCGAAAAAGTG",5,60.52,10.44,-0.32,0.06,2.79,1.08,0,">1 nonsynonymous","A18R S36G",2
"lib1","SARS-CoV-2","CTCTTGCGATGTATAT",3,1.62,NA,NA,NA,NA,NA,NA,"stop","G9L T15* Q84M L187I A192I",5
"lib1","SARS-CoV-2","CTCTTGCTTATTGTGT",3,78.53,10.68,-0.09,0.04,2.92,1.03,0,">1 nonsynonymous","T15N A33W",2
"lib1","SARS-CoV-2","CTCTTGGTTGGTCCCA",2,24.78,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y35R A42P C61L F167V",4
"lib1","SARS-CoV-2","CTCTTGTAAATCCAAA",4,25.29,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5Q A89R D98T N107S R179F",5
"lib1","SARS-CoV-2","CTCTTGTAACAAACTG",3,1.35,NA,NA,NA,NA,NA,NA,"stop","P7Y A14I W23K A33L S53D L60*",6
"lib1","SARS-CoV-2","CTCTTGTCGAGTAAGA",2,40.4,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D34G D90S T100H G155Y",4
"lib1","SARS-CoV-2","CTCTTGTTATTTCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G51T E141P P169*",3
"lib1","SARS-CoV-2","CTCTTGTTTACTTAAA",5,39.75,6.07,-4.7,1.75,1.5,1.31,0.04,">1 nonsynonymous","N107S G116W K128C K198S",4
"lib1","SARS-CoV-2","CTCTTTAAACTAGTGG",2,5.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53L D75N P82I K87M F126W T170L",6
"lib1","SARS-CoV-2","CTCTTTAAAGTTATAT",7,75.28,10.28,-0.49,0.06,2.8,1.05,0,">1 nonsynonymous","Y123V E141Q V153L",3
"lib1","SARS-CoV-2","CTCTTTAACATTAATA",6,17.19,9.22,-1.55,0.29,1.54,1.1,0.04,">1 nonsynonymous","A14T P96H",2
"lib1","SARS-CoV-2","CTCTTTAAGCCTTACA",12,177.08,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K56T A89N I104M L122S S129T F167L",6
"lib1","SARS-CoV-2","CTCTTTACGGATATAA",1,18.76,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G86Q L162S",2
"lib1","SARS-CoV-2","CTCTTTACTATGAAAT",6,2.49,NA,NA,NA,NA,NA,NA,"stop","C61L P161*",2
"lib1","SARS-CoV-2","CTCTTTAGTCACAAGT",9,156.43,9.37,-1.39,0.06,2.86,1.07,0,">1 nonsynonymous","T100N T170N",2
"lib1","SARS-CoV-2","CTCTTTATTCTTTTGA",3,3.34,NA,NA,NA,NA,NA,NA,"stop","G9V N120S N157R Y175L V180L F185H T201*",7
"lib1","SARS-CoV-2","CTCTTTCACTAGTTCT",2,22.9,10.28,-0.49,0.07,2.92,1,0,">1 nonsynonymous","S41W K87L K114M",3
"lib1","SARS-CoV-2","CTCTTTCAGTGATATA",7,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S C49P P177I",3
"lib1","SARS-CoV-2","CTCTTTCCTAAGAATA",2,0.77,NA,NA,NA,NA,NA,NA,"stop","S19* S184F",2
"lib1","SARS-CoV-2","CTCTTTGCAATCTACA",2,25.46,7.84,-2.92,0.45,1.5,1.14,0.07,">1 nonsynonymous","W23L C49H G117E",3
"lib1","SARS-CoV-2","CTCTTTGTGAAAAGAT",6,80.91,10.7,-0.07,0.05,2.9,1.06,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","CTCTTTTAAAAGGTCC",10,183.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37Y D68L G83N N107G Y121T",5
"lib1","SARS-CoV-2","CTCTTTTACCCACTAG",5,135.77,10.74,-0.02,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTCTTTTAGAATGAGT",2,11.87,10.62,-0.15,0.1,2.93,1.04,0,">1 nonsynonymous","T55V K87T",2
"lib1","SARS-CoV-2","CTCTTTTATCAAGGAA",5,13.88,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6V D97L N107L F126C",4
"lib1","SARS-CoV-2","CTCTTTTTCAGCCTTG",8,52.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55I K94Y G117K P149L Y165T",5
"lib1","SARS-CoV-2","CTGAAAAAAGAGTCAG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","S45C V103* I138K",3
"lib1","SARS-CoV-2","CTGAAAAACATATACT",3,22.29,9.3,-1.47,0.2,1.65,1.18,0.02,">1 nonsynonymous","Y35V S53R P96R",3
"lib1","SARS-CoV-2","CTGAAAAACATCAACT",2,30.64,10.14,-0.63,0.07,2.97,1,0,">1 nonsynonymous","G83K Q168M",2
"lib1","SARS-CoV-2","CTGAAAAATCACTCAA",4,31.47,10.11,-0.65,0.09,2.86,1.03,0,">1 nonsynonymous","I2T L111S V173I",3
"lib1","SARS-CoV-2","CTGAAAACCGCGACAG",4,19.44,10.67,-0.09,0.11,2.88,1.15,0,">1 nonsynonymous","L60A Q84M",2
"lib1","SARS-CoV-2","CTGAAAACGTATTAGT",5,89.23,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S43C I88G L122S",3
"lib1","SARS-CoV-2","CTGAAAAGCCAGGAAT",4,104.2,6.91,-3.86,0.25,1.5,1.15,0.01,">1 nonsynonymous","C31L N58L N120S Y178N",4
"lib1","SARS-CoV-2","CTGAAAAGTGACTCAT",23,404.62,10.63,-0.14,0.04,2.85,1.04,0,">1 nonsynonymous","C61G D97K N151W Q163V A190S",5
"lib1","SARS-CoV-2","CTGAAAAGTTTACTTA",1,18.64,6.54,-4.22,0.65,1.5,1.16,0.04,">1 nonsynonymous","Q84V D98T R127T L162M",4
"lib1","SARS-CoV-2","CTGAAAATAAAAACAC",7,178.49,10.07,-0.69,0.05,2.86,1,0,">1 nonsynonymous","S43V T100N T170A",3
"lib1","SARS-CoV-2","CTGAAAATAATCAACC",4,55.36,10.55,-0.21,0.09,2.85,1,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","CTGAAAATACACTACC",3,1.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","CTGAAAATCCATCCGG",1,71.51,9.24,-1.53,0.09,2.87,1.08,0,">1 nonsynonymous","N64T Y119L T148I",3
"lib1","SARS-CoV-2","CTGAAAATCTACGAAT",1,10.3,6.35,-4.41,0.34,1.5,1.01,0,">1 nonsynonymous","A81L V103C S200M",3
"lib1","SARS-CoV-2","CTGAAAATCTTTGGAC",5,59.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F47Y S53W Y91T",3
"lib1","SARS-CoV-2","CTGAAAATGATACCGC",4,67.69,9.56,-1.2,0.08,2.76,1.09,0,">1 nonsynonymous","F126I G146S",2
"lib1","SARS-CoV-2","CTGAAAATGGAAATGG",1,131.08,10.76,0,0.06,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAAAATTTACTGTA",1,29.23,10.16,-0.6,0.15,2.35,1.02,0.01,">1 nonsynonymous","S43G D90S T148P",3
"lib1","SARS-CoV-2","CTGAAACAGTATTATA",2,14.96,6,-4.76,1.05,3,1.12,0,">1 nonsynonymous","C6E K56R F99N C158K T201V",5
"lib1","SARS-CoV-2","CTGAAACAGTGGGGGA",6,1.08,NA,NA,NA,NA,NA,NA,"stop","W23* T63Q P82* C158R P169S",5
"lib1","SARS-CoV-2","CTGAAACATGAGTAAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G117A V173A L183Q",4
"lib1","SARS-CoV-2","CTGAAACATGTTACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T170*",1
"lib1","SARS-CoV-2","CTGAAACCAACACGAA",1,55.18,10.93,0.17,0.08,2.92,1.05,0,">1 nonsynonymous","Y39M E154S",2
"lib1","SARS-CoV-2","CTGAAACCTGATTCGA",2,77.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36N Y50D F62Y K94Q N107Q K114N N157S F167S",8
"lib1","SARS-CoV-2","CTGAAACCTGCTTCGA",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V103F",2
"lib1","SARS-CoV-2","CTGAAACGGCAGGTAA",5,0,NA,NA,NA,NA,NA,NA,"stop","G9* A18S D34V D75E A81C F99I S113M Y119M",8
"lib1","SARS-CoV-2","CTGAAACTGCAATGAC",1,68.4,10.02,-0.75,0.06,2.63,1,0,">1 nonsynonymous","G51N A105C",2
"lib1","SARS-CoV-2","CTGAAACTTATAACAT",4,24.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P96L R127Y G152Y",3
"lib1","SARS-CoV-2","CTGAAAGAAAAACCGA",6,2.79,NA,NA,NA,NA,NA,NA,"stop","I2V A33F Y91V G101D W106Q Y119R E141*",7
"lib1","SARS-CoV-2","CTGAAAGCGCTTAATG",11,91.24,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","R25S Y123S N130L C150K",4
"lib1","SARS-CoV-2","CTGAAAGCTCTACTAA",2,1.06,NA,NA,NA,NA,NA,NA,"stop","N1A L60V W106R L131* I138R P149R",6
"lib1","SARS-CoV-2","CTGAAAGGCGAGTAAA",6,51.96,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","T3Q A14S D68C K94A K114D",5
"lib1","SARS-CoV-2","CTGAAAGGTAAGCCCT",4,142.28,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","CTGAAAGTCTTTAAAT",8,134.57,6.94,-3.82,0.13,1.95,1.15,0,">1 nonsynonymous","K128Y Y143V P149H N157D",4
"lib1","SARS-CoV-2","CTGAAAGTGTTCAAGT",1,22.18,10.41,-0.35,0.07,2.83,1,0,"1 nonsynonymous","P7W",1
"lib1","SARS-CoV-2","CTGAAATAAAGTATTA",7,62.39,10.49,-0.27,0.04,2.84,1.07,0,">1 nonsynonymous","A42C L187I",2
"lib1","SARS-CoV-2","CTGAAATAATCATTTT",1,42.75,9.19,-1.57,0.11,1.75,1.18,0.01,">1 nonsynonymous","T3S W106Q L122S Y178S",4
"lib1","SARS-CoV-2","CTGAAATATTCCCACA",1,20.58,10.15,-0.61,0.15,2.57,1.07,0.02,">1 nonsynonymous","T15I F44V",2
"lib1","SARS-CoV-2","CTGAAATCGTCTTCCG",4,15.04,10.07,-0.69,0.42,1.5,1,0.07,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","CTGAAATCTCCGAAAT",1,30.68,9.87,-0.89,0.08,2.48,1.08,0,">1 nonsynonymous","S36W A81C",2
"lib1","SARS-CoV-2","CTGAAATCTTTGCTTA",1,25.33,10.42,-0.34,0.09,2.72,1.04,0,">1 nonsynonymous","S43M D90K E141I",3
"lib1","SARS-CoV-2","CTGAAATGCAACAACA",1,20.4,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V65T C102P S139L V173E",4
"lib1","SARS-CoV-2","CTGAAATGCTCATAAT",4,50.99,6,-4.76,2,3,1.23,0,">1 nonsynonymous","A67L N130R E141P C150L",4
"lib1","SARS-CoV-2","CTGAAATGGACTGGAA",6,85.89,8.38,-2.38,0.2,1.56,1.12,0.02,">1 nonsynonymous","N118V G146W T201G",3
"lib1","SARS-CoV-2","CTGAAATGTACGAGAG",1,42.37,8.39,-2.37,0.24,1.56,1.21,0.02,">1 nonsynonymous","C31W I88M",2
"lib1","SARS-CoV-2","CTGAAATGTTTAAGAT",10,8.13,7.42,-3.35,0.37,2.01,1.23,0.05,">1 nonsynonymous","R25P D75S P82T T201M",4
"lib1","SARS-CoV-2","CTGAAATTATACCCGC",3,50.48,10.78,0.02,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAAATTATGTGTAC",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M G146F P161S",3
"lib1","SARS-CoV-2","CTGAAATTCATACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q D90M F99L",3
"lib1","SARS-CoV-2","CTGAAATTTTTGCACA",1,7.12,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S41W C49L L60G L95F",4
"lib1","SARS-CoV-2","CTGAACAAAATCATGG",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53P D68N P149M",3
"lib1","SARS-CoV-2","CTGAACAAACATGACA",8,371.1,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","G101D",1
"lib1","SARS-CoV-2","CTGAACAATATCGCCA",2,18.6,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A14T V20L C61D",3
"lib1","SARS-CoV-2","CTGAACACACCCATAT",12,105.06,6.08,-4.68,1.17,1.5,1.28,0.04,">1 nonsynonymous","I2H R136G G172A",3
"lib1","SARS-CoV-2","CTGAACACCTTTAGGA",5,2.05,NA,NA,NA,NA,NA,NA,"stop","C49* T201I",2
"lib1","SARS-CoV-2","CTGAACACGGGAAATA",2,40.43,9.4,-1.36,0.22,1.76,1.19,0.02,">1 nonsynonymous","K94A Y121Q K132N",3
"lib1","SARS-CoV-2","CTGAACAGACCTGTCT",10,114.38,10.11,-0.66,0.07,2.9,1,0,">1 nonsynonymous","A81E G174L",2
"lib1","SARS-CoV-2","CTGAACAGGAAACACT",1,0.96,NA,NA,NA,NA,NA,NA,"stop","E76* C102L K198S",3
"lib1","SARS-CoV-2","CTGAACAGGAGGCCAA",3,1.99,NA,NA,NA,NA,NA,NA,"stop","K56R K87N D97* K114E Y178R",5
"lib1","SARS-CoV-2","CTGAACATAAGAGACG",2,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V C49V D68T G116S A145K Y165N",6
"lib1","SARS-CoV-2","CTGAACATCCGTGCAT",3,106.6,10.79,0.03,0.07,2.9,1.06,0,">1 nonsynonymous","R16D L122T",2
"lib1","SARS-CoV-2","CTGAACATTAAGGGAT",2,27.08,6,-4.76,0.59,1.5,1.1,0,">1 nonsynonymous","C6V F12L G172R K198G",4
"lib1","SARS-CoV-2","CTGAACCAAAATTTGG",1,9.97,10.54,-0.22,0.14,2.85,1.04,0.01,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","CTGAACCCACATTCAC",5,56.05,10.74,-0.03,0.06,2.92,1.04,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","CTGAACCCAGACGTAA",2,28.96,9.84,-0.93,0.12,1.96,1.05,0.01,">1 nonsynonymous","D98G R136N",2
"lib1","SARS-CoV-2","CTGAACCCCCTAAGGT",1,3.62,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","CTGAACGAACGTTGAT",3,53.19,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","S36D D112K T170C",3
"lib1","SARS-CoV-2","CTGAACGAAGTGATCA",2,5.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5Q D90H F167V",3
"lib1","SARS-CoV-2","CTGAACGACCTCCTCT",3,15.87,6.36,-4.4,0.45,1.5,1.04,0.02,">1 nonsynonymous","A105N E135W",2
"lib1","SARS-CoV-2","CTGAACGACTTAGCCT",4,6.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T A81N T100F G174E",4
"lib1","SARS-CoV-2","CTGAACGCATATCATA",2,27.17,6.33,-4.44,0.21,1.5,1.04,0,">1 nonsynonymous","N64L D90V N109T V182F",4
"lib1","SARS-CoV-2","CTGAACGGCAATTTTT",3,1.33,NA,NA,NA,NA,NA,NA,"stop","D90Q L131*",2
"lib1","SARS-CoV-2","CTGAACGGGCAGCATT",1,73.2,6.27,-4.5,0.7,1.5,1.12,0.02,">1 nonsynonymous","D68W W106V P133F P177F",4
"lib1","SARS-CoV-2","CTGAACGTCTGATTGT",4,40.4,10.44,-0.32,0.09,2.96,1,0,">1 nonsynonymous","Y35W D90F T148G",3
"lib1","SARS-CoV-2","CTGAACGTTCGAGCTG",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129V Q176H",2
"lib1","SARS-CoV-2","CTGAACTACTAAGAAT",8,109.5,8.72,-2.05,0.07,2.83,1.11,0,">1 nonsynonymous","K87N N109T",2
"lib1","SARS-CoV-2","CTGAACTATGAAGCAG",3,33.72,6.34,-4.43,0.7,1.5,1.12,0.03,">1 nonsynonymous","A14R L38S V77M E135T L162V",5
"lib1","SARS-CoV-2","CTGAACTCACAACCCT",6,113.2,10.74,-0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAACTGGTGGAAAA",2,6.84,9.26,-1.51,0.14,2.82,1.23,0.01,">1 nonsynonymous","G74A Y123R F160D",3
"lib1","SARS-CoV-2","CTGAACTTCCGTTAAA",2,32.15,10.72,-0.04,0.08,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAAGAAAAACGACT",2,19.57,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G86V C158L Q176K",3
"lib1","SARS-CoV-2","CTGAAGAAAGAACCAA",4,0.57,NA,NA,NA,NA,NA,NA,"stop","Y35* P82K I88R D112L N171W",5
"lib1","SARS-CoV-2","CTGAAGAAATTTGGAA",2,1.31,NA,NA,NA,NA,NA,NA,"stop","N4* W23S Y39S T46I T140V G152H",6
"lib1","SARS-CoV-2","CTGAAGAAGAGTACAT",4,49.78,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","A22F S113N Q144L F167K",4
"lib1","SARS-CoV-2","CTGAAGACAAGCATCA",1,21.46,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","N64R F99I K132P Y143L",4
"lib1","SARS-CoV-2","CTGAAGACGAATCACA",2,16.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N13F S36V S41H C61N D90R A105I R136H",7
"lib1","SARS-CoV-2","CTGAAGACGCTACTGT",4,86.5,10.82,0.06,0.04,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGAAGAGGAAAGCCA",1,11.5,10.96,0.2,0.11,2.91,1.06,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","CTGAAGATGGAGGAAA",4,7.59,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22S T63K P82L K199F",4
"lib1","SARS-CoV-2","CTGAAGCCTACGACAC",4,67.81,9.72,-1.04,0.09,2.68,1.06,0,">1 nonsynonymous","A42V K48N L111S",3
"lib1","SARS-CoV-2","CTGAAGCGAAACTAAC",3,50.09,6,-4.76,1.33,3,1.17,0,">1 nonsynonymous","F44D Q84N N107D H189R",4
"lib1","SARS-CoV-2","CTGAAGCGTCAAGGTA",6,34.41,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D98A Y123N F134Q N151M S200W",5
"lib1","SARS-CoV-2","CTGAAGCTCAAGGAGG",2,57.75,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41R K87A C158G",3
"lib1","SARS-CoV-2","CTGAAGCTGAAATACA",7,45.73,10.76,0,0.09,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAAGCTGGGATATA",2,21.95,10.76,-0.01,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAAGCTTAATCTCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","CTGAAGGAAAAGATAG",5,35.49,7.52,-3.25,0.14,1.5,1.14,0.01,">1 nonsynonymous","P161D S184L",2
"lib1","SARS-CoV-2","CTGAAGGCCGCTGAAC",1,65.92,6.22,-4.54,0.92,1.5,1.13,0.04,">1 nonsynonymous","G9I N107D N118F T140H T201L",5
"lib1","SARS-CoV-2","CTGAAGGTTCATTCAT",4,58.89,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4W S19V S29D N151S P197T",5
"lib1","SARS-CoV-2","CTGAAGTACAGAGAAA",1,24.2,10.4,-0.37,0.07,2.86,1.04,0,">1 nonsynonymous","T140F A190C",2
"lib1","SARS-CoV-2","CTGAAGTACTAGTACA",5,1.78,NA,NA,NA,NA,NA,NA,"stop","A14Q L57* F167L H189P",4
"lib1","SARS-CoV-2","CTGAAGTCAGCTTTTT",3,21.59,7.67,-3.09,0.26,1.53,1.2,0.03,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","CTGAAGTGTATCGCCA",3,79.74,10.6,-0.16,0.06,2.87,1.02,0,">1 nonsynonymous","S45M N171T",2
"lib1","SARS-CoV-2","CTGAAGTGTGCATCCA",4,15.3,6.8,-3.96,0.53,1.5,1.21,0.03,">1 nonsynonymous","F44L P82V K132G K199L",4
"lib1","SARS-CoV-2","CTGAATAAACCCATCT",4,14.73,6.88,-3.88,0.68,1.5,1.05,0.08,">1 nonsynonymous","Y35E V65R P149L C158D",4
"lib1","SARS-CoV-2","CTGAATAAATAACCTT",1,31.96,10.64,-0.12,0.04,2.92,1.04,0,">1 nonsynonymous","I2T K114N",2
"lib1","SARS-CoV-2","CTGAATAACCAATTCA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","I88Q E135*",2
"lib1","SARS-CoV-2","CTGAATAACTTTCGAT",1,14.25,9.02,-1.75,0.22,2.43,1.08,0.02,">1 nonsynonymous","N4V Y35M V52E Q168G",4
"lib1","SARS-CoV-2","CTGAATAAGAGCCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5M T55I Q168* S184T C195L",5
"lib1","SARS-CoV-2","CTGAATAAGCCATTAT",7,38.19,10.69,-0.07,0.07,2.91,1.06,0,"1 nonsynonymous","K199N",1
"lib1","SARS-CoV-2","CTGAATACAAAAAAAG",2,9.34,10.68,-0.08,0.21,1.83,1.01,0.01,">1 nonsynonymous","N4Y R16G N64T D90L D98S",5
"lib1","SARS-CoV-2","CTGAATACCATTAGTA",5,53.08,10.76,-0.01,0.05,2.97,1.01,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","CTGAATACGCATACTA",2,17.45,10.77,0.01,0.12,2.99,1,0.01,">1 nonsynonymous","V173F K199W",2
"lib1","SARS-CoV-2","CTGAATACGCGCCATT",1,23.25,10.7,-0.06,0.04,2.96,1.02,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","CTGAATAGCGGCTCCA",13,453.06,9.42,-1.35,0.07,2.61,1.09,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","CTGAATAGGGTAAAAC",4,1.84,NA,NA,NA,NA,NA,NA,"stop","L122G I142* K199Y",3
"lib1","SARS-CoV-2","CTGAATATGCCGACGA",1,13.28,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V11Y T100L E141P N157L S164F",5
"lib1","SARS-CoV-2","CTGAATCACCGCAGAT",4,31.22,9.94,-0.82,0.07,2.76,1.04,0,">1 nonsynonymous","C6S S53R",2
"lib1","SARS-CoV-2","CTGAATCAGTATCCAA",10,49.26,6,-4.76,1.51,1.5,1.11,0.01,">1 nonsynonymous","Y50P Y121N",2
"lib1","SARS-CoV-2","CTGAATCCCACCGTCC",12,0.71,NA,NA,NA,NA,NA,NA,"stop","Q84G V103*",2
"lib1","SARS-CoV-2","CTGAATGAACCCCGCC",1,0.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104K",1
"lib1","SARS-CoV-2","CTGAATGAACCTGAGT",4,17.41,6.49,-4.27,0.74,1.5,1.28,0.04,">1 nonsynonymous","T85L W106L N120A",3
"lib1","SARS-CoV-2","CTGAATGATTTACGGT",1,5.47,10.84,0.07,0.1,2.9,1.09,0,"1 nonsynonymous","N40E",1
"lib1","SARS-CoV-2","CTGAATGGCTACCCGT",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C N107V N120L",3
"lib1","SARS-CoV-2","CTGAATGGTCCCTATA",4,45.96,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5T L95S",2
"lib1","SARS-CoV-2","CTGAATGTACGCACTT",2,7.87,10.41,-0.35,0.1,2.96,1.03,0.01,"1 nonsynonymous","N40V",1
"lib1","SARS-CoV-2","CTGAATGTCTAATATA",3,125.93,9.41,-1.36,0.07,2.61,1.11,0,">1 nonsynonymous","S129T Q176L",2
"lib1","SARS-CoV-2","CTGAATTAAGGTTTGA",5,44.21,6.13,-4.64,1.13,1.5,1.3,0.03,">1 nonsynonymous","V20N K87R T100L G116N",4
"lib1","SARS-CoV-2","CTGAATTAATTACTGT",5,1.68,NA,NA,NA,NA,NA,NA,"stop","T46V P82* A89G",3
"lib1","SARS-CoV-2","CTGAATTACTGTGGCC",3,2.2,NA,NA,NA,NA,NA,NA,"stop","K56* D68* G152S",3
"lib1","SARS-CoV-2","CTGAATTCTTAGGCAA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I D98G V103L F156S",4
"lib1","SARS-CoV-2","CTGACAAAAAGAAAAC",1,38.02,9.05,-1.71,0.07,2.87,1.11,0,">1 nonsynonymous","V37S T85S F126Y K132P",4
"lib1","SARS-CoV-2","CTGACAAACATACTTT",1,10.76,6,-4.76,2,3,1.35,0.03,">1 nonsynonymous","C6L A14L D59V P177S",4
"lib1","SARS-CoV-2","CTGACAAACGCGTATG",5,1.96,NA,NA,NA,NA,NA,NA,"stop","T3* F44H D59A S69R V115L L183T",6
"lib1","SARS-CoV-2","CTGACAAATGCGAATT",5,32.84,6.9,-3.86,0.37,1.5,1.18,0.04,">1 nonsynonymous","N24T T85A L183Y",3
"lib1","SARS-CoV-2","CTGACAACAAAACACA",4,30.16,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2S F44P L95H R136D P191S",5
"lib1","SARS-CoV-2","CTGACAAGAAAAAAAA",6,1.55,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib1","SARS-CoV-2","CTGACAAGATTAACTT",16,162.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F62Q I88Y",2
"lib1","SARS-CoV-2","CTGACAAGCACCTTAA",9,243.13,8.37,-2.39,0.11,2.57,1.08,0,">1 nonsynonymous","N157R P191V K199N",3
"lib1","SARS-CoV-2","CTGACAAGCACTCGAC",8,126.32,10.41,-0.36,0.04,2.82,1.02,0,">1 nonsynonymous","A22Q Y35S N171Y",3
"lib1","SARS-CoV-2","CTGACAAGCTATTGCC",4,73.42,10.81,0.05,0.08,2.96,1.02,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","CTGACAAGCTGATTAT",11,9.83,NA,NA,NA,NA,NA,NA,"stop","F70K N92* D97S Y121H C158R Q176L",6
"lib1","SARS-CoV-2","CTGACAAGGCGAAGCC",6,24.56,7.82,-2.94,0.33,1.5,1.24,0.04,">1 nonsynonymous","P7Y C61L Y66M T148R Y165F",5
"lib1","SARS-CoV-2","CTGACACAATCTACAA",7,83.42,10.74,-0.02,0.07,2.89,1.07,0,">1 nonsynonymous","T3H S41A",2
"lib1","SARS-CoV-2","CTGACACATGACATTA",4,18.12,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2D P82R N92S G101S V181S",5
"lib1","SARS-CoV-2","CTGACACATTGTTTAC",8,110.74,9.83,-0.93,0.09,2.21,1.05,0,">1 nonsynonymous","C6R T15S P54R",3
"lib1","SARS-CoV-2","CTGACACCCTACCAAA",2,24.84,9.99,-0.78,0.09,2.78,1,0,">1 nonsynonymous","T3S A33M Y143L",3
"lib1","SARS-CoV-2","CTGACACGCTCTAGTG",10,144.5,10.59,-0.18,0.04,2.92,1.03,0,">1 nonsynonymous","T3A T15E",2
"lib1","SARS-CoV-2","CTGACACGTATGAAAG",3,50.2,9.48,-1.29,0.11,2.53,1.1,0,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","CTGACACGTTTCCCTA",2,17.71,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","G9Y R124W T170F K199L",4
"lib1","SARS-CoV-2","CTGACACTACAATCCG",6,113.49,10.75,-0.01,0.05,2.98,1,0,"1 nonsynonymous","G196S",1
"lib1","SARS-CoV-2","CTGACACTATTAATGA",3,18.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3K R16K S45C I88L K94D S184I",6
"lib1","SARS-CoV-2","CTGACAGAAAATTAAC",10,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R C61L N110E Y123K G152C",5
"lib1","SARS-CoV-2","CTGACAGAAAGCGATG",1,17.52,9.54,-1.22,0.15,2.28,1,0.01,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","CTGACAGAGAAATCCG",4,76.64,10.02,-0.74,0.07,2.4,1.02,0,"1 nonsynonymous","W106I",1
"lib1","SARS-CoV-2","CTGACAGCAAAGTAAG",2,5.79,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Q84Y E141R F167T",3
"lib1","SARS-CoV-2","CTGACAGGCTAACCAT",3,58.88,6.46,-4.3,0.36,1.5,1.12,0.01,"1 nonsynonymous","V71E",1
"lib1","SARS-CoV-2","CTGACAGGTATCCGTA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P G196P",2
"lib1","SARS-CoV-2","CTGACATATATTGAAT",2,39.09,10.66,-0.1,0.07,2.84,1.11,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","CTGACATATTCCAGGC",1,40.13,10.04,-0.73,0.11,2.76,1,0,">1 nonsynonymous","D97Y E141T F160L A192S",4
"lib1","SARS-CoV-2","CTGACATCAATCAAAA",2,4.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","CTGACATCGGACATAT",2,7.56,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","F8C S43F D137P",3
"lib1","SARS-CoV-2","CTGACATTTCACGACA",2,18.19,10.19,-0.57,0.14,2.59,1,0.01,">1 nonsynonymous","G83T D90E",2
"lib1","SARS-CoV-2","CTGACCAAGCTATCTA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","T3S F47L D97*",3
"lib1","SARS-CoV-2","CTGACCACGTTCCTAT",1,20.5,10,-0.76,0.17,2.17,1.03,0.04,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","CTGACCAGAGAGTAAA",4,88.22,10.14,-0.63,0.08,2.61,1.04,0,">1 nonsynonymous","N4E A89S G116K R136K",4
"lib1","SARS-CoV-2","CTGACCAGCATATAAA",9,91.51,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N13F V37S N58T L162D",4
"lib1","SARS-CoV-2","CTGACCAGTAAGCCAG",2,50.67,10.75,-0.01,0.05,2.81,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGACCCAGCAGCATT",16,119.37,8.95,-1.81,0.16,1.5,1.17,0.01,">1 nonsynonymous","A81L L95M L122A",3
"lib1","SARS-CoV-2","CTGACCCCTCTAGACC",2,25.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S R16I K48N Y93Q S147N G172Y",6
"lib1","SARS-CoV-2","CTGACCCCTTTACTGG",4,61.25,10.04,-0.72,0.06,2.57,1.01,0,">1 nonsynonymous","T63N D90H F126L",3
"lib1","SARS-CoV-2","CTGACCCGTACACTAT",5,124.36,10.44,-0.32,0.05,2.89,1.05,0,">1 nonsynonymous","T15S D90C",2
"lib1","SARS-CoV-2","CTGACCCTACGTTGCC",1,1.14,NA,NA,NA,NA,NA,NA,"stop","A14* K26S N151L",3
"lib1","SARS-CoV-2","CTGACCCTCACAGTAA",1,10.6,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F70E T148L G174R",3
"lib1","SARS-CoV-2","CTGACCGAAAAACGAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","R16K S41Y G101A T140*",4
"lib1","SARS-CoV-2","CTGACCGATAACCGAC",2,31.11,10.63,-0.14,0.15,2.79,1.19,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTGACCGATTAAACAC",5,71.19,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9K W106T E135T G172S",4
"lib1","SARS-CoV-2","CTGACCGTCAACATGC",7,69.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P96I P149T G174C",3
"lib1","SARS-CoV-2","CTGACCTAGTAAGAAA",1,13.9,10.68,-0.09,0.08,2.77,1.21,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","CTGACCTATCTTCGCT",3,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","CTGACCTATGCTGTGA",3,56.87,10.2,-0.56,0.09,2.59,1.04,0,">1 nonsynonymous","D90H K132Y",2
"lib1","SARS-CoV-2","CTGACCTGTCCAGATA",3,7.91,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","N107G Y119F I142S",3
"lib1","SARS-CoV-2","CTGACCTTTAACAGGG",2,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26I V52S D112S",3
"lib1","SARS-CoV-2","CTGACGAAAAATTTAA",4,107.87,10.61,-0.16,0.04,2.83,1.06,0,">1 nonsynonymous","P54L K87Y V115S",3
"lib1","SARS-CoV-2","CTGACGACAACCAAAA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A42T V77L G86F Y165L",5
"lib1","SARS-CoV-2","CTGACGACTACCACCT",12,116.46,9.77,-1,0.07,2.68,1.04,0,">1 nonsynonymous","C6S F160V",2
"lib1","SARS-CoV-2","CTGACGAGAAGATAAA",1,12.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90L N107T P161S R179M L187Q",5
"lib1","SARS-CoV-2","CTGACGAGGGCAACAC",8,1.52,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","CTGACGCGATGAATCT",2,10.39,7.54,-3.22,0.44,1.5,1.21,0.05,">1 nonsynonymous","C6L G117S Q163L",3
"lib1","SARS-CoV-2","CTGACGCGTGCGTCCC",5,6.35,NA,NA,NA,NA,NA,NA,"stop","D98R E186*",2
"lib1","SARS-CoV-2","CTGACGCTAGGCGAAC",1,33.16,9.34,-1.42,0.1,1.76,1.14,0,">1 nonsynonymous","G9E G83V Y91H",3
"lib1","SARS-CoV-2","CTGACGCTCTCTCGCC",5,43.5,10.73,-0.03,0.1,2.96,1,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","CTGACGGGGACCGGTT",6,74.89,10.78,0.01,0.11,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGACGGTACTAATTT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","C31Y I142*",2
"lib1","SARS-CoV-2","CTGACGTACTTACCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F160H T201*",2
"lib1","SARS-CoV-2","CTGACGTATGCCTCTA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","I2K K56H K87* L187I",4
"lib1","SARS-CoV-2","CTGACGTCACTAGCGT",2,58.14,10.87,0.11,0.06,2.95,1,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","CTGACGTGGATGATAA",8,18.7,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","P96R A105N",2
"lib1","SARS-CoV-2","CTGACGTTATCCGTCT",3,270.77,10.17,-0.59,0.04,2.89,1.02,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","CTGACGTTCTATCTTG",7,5.49,NA,NA,NA,NA,NA,NA,"stop","L5T G86D S113* R127S V180S",5
"lib1","SARS-CoV-2","CTGACTAAAATAACTT",4,74.46,10.19,-0.57,0.03,2.91,1.04,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","CTGACTAAATGCGTTA",3,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N I80T K87I D97M",4
"lib1","SARS-CoV-2","CTGACTAACACTCCCG",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Q A33F I88F I142S G166S",5
"lib1","SARS-CoV-2","CTGACTACATATTGCA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","G9* P96S P133S",3
"lib1","SARS-CoV-2","CTGACTACATTATGAA",14,16.63,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","S45C C61G N130L C158G",4
"lib1","SARS-CoV-2","CTGACTATATCATACA",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E L57V T85C F99S",4
"lib1","SARS-CoV-2","CTGACTCAAATCCCTT",3,9.58,10.75,-0.02,0.1,2.93,1,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","CTGACTCCACCTCGAA",5,64.99,6,-4.76,2,3,1.11,0,">1 nonsynonymous","L57Y A89D T148L K198L",4
"lib1","SARS-CoV-2","CTGACTCTGTCAGTCT",3,34.06,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4T N40L Y50C P82F",4
"lib1","SARS-CoV-2","CTGACTCTGTCTGTCA",3,81.38,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","G51I P82V N120D Y159L F167N",5
"lib1","SARS-CoV-2","CTGACTGATAATACCC",5,16.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36Y P96I G155K",3
"lib1","SARS-CoV-2","CTGACTGCCCGTAAAC",3,56.64,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G9E R136L Y143R P177W F185G",5
"lib1","SARS-CoV-2","CTGACTGTATCAAGAA",1,21.64,10.77,0,0.05,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGACTTAAGCGTCCG",7,78.61,6,-4.76,2,3,1.09,0,">1 nonsynonymous","R78P T85S F167I Y175I",4
"lib1","SARS-CoV-2","CTGACTTACGACACTT",7,100.14,10.41,-0.36,0.05,2.89,1.02,0,">1 nonsynonymous","Y35S L122V",2
"lib1","SARS-CoV-2","CTGACTTCCGTACACA",6,55.09,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","C6V F99T P133S P169F Q176H",5
"lib1","SARS-CoV-2","CTGACTTCGTGCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93* A190F K199M",3
"lib1","SARS-CoV-2","CTGACTTTGTCCAGGG",1,52.48,10.72,-0.05,0.05,2.91,1.04,0,">1 nonsynonymous","L60Y K114T T201G",3
"lib1","SARS-CoV-2","CTGACTTTTAGCCACG",6,1.01,NA,NA,NA,NA,NA,NA,"stop","R27* T63S F156M",3
"lib1","SARS-CoV-2","CTGACTTTTGAGCGCA",9,156.81,8,-2.76,0.22,1.5,1.16,0.01,">1 nonsynonymous","S29E S41V P161N",3
"lib1","SARS-CoV-2","CTGAGAAAAGATACAC",3,12.91,6.77,-4,0.57,1.5,1.18,0.05,">1 nonsynonymous","F8M A14T I72Q T148K T201S",5
"lib1","SARS-CoV-2","CTGAGAAAATAAAATT",3,102.76,10.05,-0.71,0.04,2.95,1.01,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","CTGAGAAAATTACTAG",2,15.5,10.84,0.08,0.18,2.82,1.14,0.02,">1 nonsynonymous","V37W K198E",2
"lib1","SARS-CoV-2","CTGAGAAACACTTATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F A81D S200R",3
"lib1","SARS-CoV-2","CTGAGAAATGGCGATT",3,143.26,10.53,-0.24,0.04,2.93,1.02,0,">1 nonsynonymous","Y39N D97M K114A",3
"lib1","SARS-CoV-2","CTGAGAACAATTTTCA",11,3.08,NA,NA,NA,NA,NA,NA,"stop","G51C V77* D137F",3
"lib1","SARS-CoV-2","CTGAGAACTAGCGAAA",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R F44L L125K E135S Y143I",5
"lib1","SARS-CoV-2","CTGAGAAGCACAAGAC",1,0.64,NA,NA,NA,NA,NA,NA,"stop","K94* Y123L P191N",3
"lib1","SARS-CoV-2","CTGAGACAATCACATT",2,161.14,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K94R F167H Q176W",3
"lib1","SARS-CoV-2","CTGAGACACCCATGCT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","CTGAGACACGCCAATC",6,36.49,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5R E10L A105Q Y121W",4
"lib1","SARS-CoV-2","CTGAGACAGCCCAATA",1,4314.75,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","T55L Y119S C150L L162T K198S",5
"lib1","SARS-CoV-2","CTGAGACATATTAGCC",3,52.82,10.78,0.01,0.05,2.91,1.07,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","CTGAGACATTAACCGA",5,88.26,10.24,-0.53,0.13,2.43,1.05,0.01,">1 nonsynonymous","T3R Y121R",2
"lib1","SARS-CoV-2","CTGAGACGGAGACAGT",4,67.59,10.78,0.01,0.06,2.89,1.06,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","CTGAGACTAATGCTGA",2,87.25,10.85,0.08,0.07,2.97,1,0,"1 nonsynonymous","N171H",1
"lib1","SARS-CoV-2","CTGAGACTATGCCATA",2,26.85,9.27,-1.5,0.17,1.88,1.09,0.01,">1 nonsynonymous","G83T D98N N107K",3
"lib1","SARS-CoV-2","CTGAGAGATTCATAAC",2,50.91,10.81,0.05,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGAGAGCATAATAGT",1,35.48,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S45L V77K D90Y S113Y G152T H189I",6
"lib1","SARS-CoV-2","CTGAGAGTGGTACAAT",14,2.66,NA,NA,NA,NA,NA,NA,"stop","V32I S45I T63F K87N F156*",5
"lib1","SARS-CoV-2","CTGAGATATTAAGCAA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","D34L P149*",2
"lib1","SARS-CoV-2","CTGAGATGCATTAACG",2,2.84,NA,NA,NA,NA,NA,NA,"stop","L5T N64V G101C E141* V173S",5
"lib1","SARS-CoV-2","CTGAGATTAGCAATCT",7,43.6,8.79,-1.98,0.14,1.78,1.18,0.01,"1 nonsynonymous","P177C",1
"lib1","SARS-CoV-2","CTGAGATTATAAACTG",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108Y P149L",2
"lib1","SARS-CoV-2","CTGAGATTGACCGACG",5,6.08,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F12P D75P V103S",3
"lib1","SARS-CoV-2","CTGAGCAAAACTTCGC",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L N58Y I72R N120D R179M",5
"lib1","SARS-CoV-2","CTGAGCAATAATTAAC",6,43.27,6.13,-4.63,1.19,1.5,1.23,0.03,">1 nonsynonymous","C49Y Y165I",2
"lib1","SARS-CoV-2","CTGAGCACAGGTTGGT",5,67.46,7.88,-2.89,0.16,1.5,1.08,0.01,">1 nonsynonymous","F62N N107H",2
"lib1","SARS-CoV-2","CTGAGCATAAAGATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13Y D59A G101W G155*",4
"lib1","SARS-CoV-2","CTGAGCATTGGAAATA",8,48.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10N C49D",2
"lib1","SARS-CoV-2","CTGAGCCCCTACAGGC",1,32.18,10.31,-0.46,0.16,1.93,1.04,0.01,">1 nonsynonymous","A14G T55L D59N S69R",4
"lib1","SARS-CoV-2","CTGAGCCTGTCTAACG",7,32.99,8.11,-2.66,0.23,1.5,1.07,0.02,"1 nonsynonymous","W106D",1
"lib1","SARS-CoV-2","CTGAGCGAAGACATTC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","L38V A81*",2
"lib1","SARS-CoV-2","CTGAGCTACGCCTACG",1,11.07,10.59,-0.17,0.07,2.85,1,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","CTGAGCTATGAAAACA",8,113.49,6.02,-4.75,0.67,1.5,1.2,0.01,">1 nonsynonymous","D59Y Y93I I104Y P177Y",4
"lib1","SARS-CoV-2","CTGAGCTATTCGAACC",4,32.73,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C49L D97S R124D A145P",4
"lib1","SARS-CoV-2","CTGAGGAACAGACTAA",2,9.85,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","S19R K48D P149S",3
"lib1","SARS-CoV-2","CTGAGGAGAAATGATG",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82F Y91L",2
"lib1","SARS-CoV-2","CTGAGGAGGACCGCCC",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W F70Q L122S R127L L162M",5
"lib1","SARS-CoV-2","CTGAGGATTAGATGTT",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31T S41V P96F H189N",4
"lib1","SARS-CoV-2","CTGAGGCAGACACCTT",7,29.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R P96L S129I",3
"lib1","SARS-CoV-2","CTGAGGCCAAATGTCG",3,8.68,7.1,-3.66,0.68,2.03,1.37,0.05,">1 nonsynonymous","I2K D34L A42M L60S D90Y",5
"lib1","SARS-CoV-2","CTGAGGCTATGAATTT",2,36.63,10.69,-0.07,0.06,2.95,1.02,0,">1 nonsynonymous","K48Q K128L",2
"lib1","SARS-CoV-2","CTGAGGGGACTCTGCA",9,42.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G74V N92L N107D N151M",4
"lib1","SARS-CoV-2","CTGAGGGTCGCTGATA",2,28.19,9.79,-0.98,0.08,2.09,1.03,0,"1 nonsynonymous","F8G",1
"lib1","SARS-CoV-2","CTGAGGTGCCTCGACT",1,14.83,6,-4.76,1.92,1.5,1.15,0.02,">1 nonsynonymous","D75M Y123R E135P",3
"lib1","SARS-CoV-2","CTGAGTAAAAGAACGT",11,173.89,8.44,-2.33,0.16,1.56,1.13,0.01,">1 nonsynonymous","G9L D90Y Y119W",3
"lib1","SARS-CoV-2","CTGAGTAACAAATTAA",2,26.62,8.45,-2.32,0.13,2.25,1.01,0.01,">1 nonsynonymous","F8L K26Q S113K K128S",4
"lib1","SARS-CoV-2","CTGAGTAAGCACATGG",17,258.64,6,-4.76,1.24,1.5,1.18,0.01,">1 nonsynonymous","W106V S113R",2
"lib1","SARS-CoV-2","CTGAGTAAGTTTAGGC",1,18.3,10.41,-0.35,0.07,2.86,1.04,0,">1 nonsynonymous","N24K S36L Y91L",3
"lib1","SARS-CoV-2","CTGAGTACATGAAGGG",4,32.98,10.08,-0.69,0.09,2.65,1.03,0,">1 nonsynonymous","G9E K26M S41V N130H L183F",5
"lib1","SARS-CoV-2","CTGAGTATACACCTTG",1,40.31,10.33,-0.44,0.05,2.8,1.02,0,">1 nonsynonymous","V115N S129L",2
"lib1","SARS-CoV-2","CTGAGTCAGGAAACAG",1,24.98,10.03,-0.73,0.09,2.95,1.03,0,">1 nonsynonymous","T148C G174D",2
"lib1","SARS-CoV-2","CTGAGTCATAATATCA",7,130.12,10.73,-0.03,0.06,2.88,1.07,0,"1 nonsynonymous","P149A",1
"lib1","SARS-CoV-2","CTGAGTCCCCACTCAT",13,290.2,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","N4R D98F Y165C",3
"lib1","SARS-CoV-2","CTGAGTCCTGTTATAT",2,21.85,10.09,-0.67,0.07,2.93,1,0,">1 nonsynonymous","V37L V115C",2
"lib1","SARS-CoV-2","CTGAGTCGCCCTCGCA",3,1.06,NA,NA,NA,NA,NA,NA,"stop","C6* Y39G C61K G152N T201S",5
"lib1","SARS-CoV-2","CTGAGTGAATTTACTT",4,52.71,8.8,-1.96,0.18,1.5,1.1,0.02,">1 nonsynonymous","L57G T85F N107P",3
"lib1","SARS-CoV-2","CTGAGTGACACTATCA",2,20.57,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","F44N S69W S129W P149H P161A",5
"lib1","SARS-CoV-2","CTGAGTGCAGCCTAAA",3,22.13,10.58,-0.19,0.09,2.99,1.01,0,">1 nonsynonymous","I104M K132D",2
"lib1","SARS-CoV-2","CTGAGTTACAGCCTCG",6,138.71,9.95,-0.81,0.06,2.71,1.03,0,">1 nonsynonymous","K132L P161S",2
"lib1","SARS-CoV-2","CTGAGTTATAGACCGA",2,42.95,8.46,-2.31,0.3,1.69,1.13,0.03,">1 nonsynonymous","Q79R F134I",2
"lib1","SARS-CoV-2","CTGAGTTATCATGGAT",3,14.02,10.75,-0.02,0.08,2.95,1.03,0,"1 nonsynonymous","K198P",1
"lib1","SARS-CoV-2","CTGAGTTCAATTTTTA",3,18.8,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","K94I D112I R136T",3
"lib1","SARS-CoV-2","CTGAGTTGTTTATGAA",9,99.62,10.61,-0.15,0.06,2.88,1.06,0,">1 nonsynonymous","P54F D90E",2
"lib1","SARS-CoV-2","CTGAGTTTCATCTGGA",9,104.31,6,-4.76,1.52,1.5,1.18,0.01,"1 nonsynonymous","K94T",1
"lib1","SARS-CoV-2","CTGATAAACACAAACA",4,6.31,7,-3.77,0.14,2.2,1,0,">1 nonsynonymous","C6M S43N P149R S164C V173A",5
"lib1","SARS-CoV-2","CTGATAAACCGCACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* K56S G86R Y165I V173T",5
"lib1","SARS-CoV-2","CTGATAAACTCGAATT",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S N107T E154W",3
"lib1","SARS-CoV-2","CTGATAAATAAGAACA",3,41.15,9.86,-0.9,0.12,2.3,1.03,0.01,">1 nonsynonymous","Y39N Y91S",2
"lib1","SARS-CoV-2","CTGATAACAATGTATG",1,5.17,9.8,-0.96,0.11,2.8,1.07,0,">1 nonsynonymous","V37L S41Y D59G K87M R136H",5
"lib1","SARS-CoV-2","CTGATAACACAACGAA",1,10.05,9.34,-1.43,0.15,2.76,1.21,0.01,">1 nonsynonymous","G9N T170L",2
"lib1","SARS-CoV-2","CTGATAACAGCCGGTA",8,75.2,10.56,-0.21,0.04,2.89,1.02,0,">1 nonsynonymous","A14M T100I",2
"lib1","SARS-CoV-2","CTGATAACATACCCAT",1,28,10.69,-0.07,0.08,2.85,1.1,0,">1 nonsynonymous","N1K D97Q",2
"lib1","SARS-CoV-2","CTGATAAGGAACCACA",2,72.53,10.08,-0.69,0.07,2.62,1.06,0,">1 nonsynonymous","G9Q D97T F134D",3
"lib1","SARS-CoV-2","CTGATAATAGAGACCT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","F17V I80M F99* K114L Y123*",5
"lib1","SARS-CoV-2","CTGATAATAGTAGAAT",6,57.04,10.72,-0.04,0.07,2.85,1.12,0,">1 nonsynonymous","V37A N171S",2
"lib1","SARS-CoV-2","CTGATACAAACCAATT",1,12.27,9.96,-0.81,0.28,2.02,1.05,0.06,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","CTGATACAACTTAGAT",7,174.59,8.87,-1.89,0.1,2.78,1.16,0,">1 nonsynonymous","F126T H189L",2
"lib1","SARS-CoV-2","CTGATACAGGAACATA",2,55.94,9.91,-0.85,0.09,2.07,1.07,0,">1 nonsynonymous","L131S Y175W",2
"lib1","SARS-CoV-2","CTGATACAGTAGAAAT",4,10.38,6.09,-4.68,1.13,1.5,1.17,0.03,">1 nonsynonymous","N13V A105I",2
"lib1","SARS-CoV-2","CTGATACCCAACCAGG",12,127.22,8.38,-2.39,0.21,1.71,1.12,0.02,">1 nonsynonymous","P7M N64D I142D",3
"lib1","SARS-CoV-2","CTGATACCCATCGCTA",1,12.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F167C K199N",2
"lib1","SARS-CoV-2","CTGATACCTGGAGTAG",4,14.5,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A89M L122A Y165F",3
"lib1","SARS-CoV-2","CTGATACGCGTGATGA",6,42.38,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","P96H G101D L187C",3
"lib1","SARS-CoV-2","CTGATACGGCATATTG",2,31.13,7.14,-3.63,0.36,1.5,1.2,0.03,">1 nonsynonymous","V11Q K87S L122F I138Y",4
"lib1","SARS-CoV-2","CTGATACTCAAAGAGG",1,24.45,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F47N T100L W106V K199M",4
"lib1","SARS-CoV-2","CTGATACTTAAGACGA",3,25.19,9.73,-1.03,0.17,2.08,1.04,0.01,">1 nonsynonymous","C61S S69L T201W",3
"lib1","SARS-CoV-2","CTGATAGGAGACAGTT",3,45.64,9.24,-1.53,0.18,1.69,1.1,0.01,">1 nonsynonymous","S41A C49L",2
"lib1","SARS-CoV-2","CTGATAGGCCAACGGT",2,60.24,10.65,-0.11,0.04,2.88,1.08,0,">1 nonsynonymous","N110Y F134W",2
"lib1","SARS-CoV-2","CTGATAGTACACCAAG",3,0.69,NA,NA,NA,NA,NA,NA,"stop","T3* I88S Y121T",3
"lib1","SARS-CoV-2","CTGATAGTGAGAAGCG",1,11.17,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","N4F S41I V103S",3
"lib1","SARS-CoV-2","CTGATAGTGCTTTATT",6,3.83,NA,NA,NA,NA,NA,NA,"stop","Y50N S139F F156*",3
"lib1","SARS-CoV-2","CTGATATAACCTTTTT",3,37.74,6,-4.76,1.44,1.5,1.15,0.01,">1 nonsynonymous","Y39L C102F N107R C158I",4
"lib1","SARS-CoV-2","CTGATATAGTGTGTAC",4,52.55,10.69,-0.07,0.07,2.94,1.03,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CTGATATGCTGTAAAG",1,41.07,6.08,-4.68,1.36,1.5,1.22,0.03,">1 nonsynonymous","L5G T46A A81P",3
"lib1","SARS-CoV-2","CTGATATGGAGTCATA",6,81.86,10.6,-0.16,0.06,2.9,1.03,0,">1 nonsynonymous","K56N N64I",2
"lib1","SARS-CoV-2","CTGATATTAGGCAGCA",2,29.22,6.33,-4.43,0.75,1.5,1.22,0.04,">1 nonsynonymous","V32T C49F T55A A105V R124L F134W F185I",7
"lib1","SARS-CoV-2","CTGATATTCACACTAG",8,158.97,10.15,-0.62,0.07,2.52,1.04,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","CTGATATTCGCATATG",12,46.35,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D98L V103H Y119N",3
"lib1","SARS-CoV-2","CTGATCAGAGGATCAC",5,92.86,10.02,-0.74,0.12,2.25,1.07,0.01,">1 nonsynonymous","V32G S69F",2
"lib1","SARS-CoV-2","CTGATCATTTATACGA",1,72.36,10.18,-0.59,0.06,2.85,1,0,">1 nonsynonymous","C6S P7H",2
"lib1","SARS-CoV-2","CTGATCCAGAACATAG",7,53.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6L C61L K87M A105Q R136G P149Y S164A",7
"lib1","SARS-CoV-2","CTGATCCCAGATATGG",4,120.82,10.84,0.07,0.06,2.9,1.05,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","CTGATCGTGTCCGACC",6,38.61,7.03,-3.74,0.35,1.5,1.12,0.03,">1 nonsynonymous","P96R Y143R G146W",3
"lib1","SARS-CoV-2","CTGATCTCATTAGTTC",2,28.24,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","I2E V37L G101S",3
"lib1","SARS-CoV-2","CTGATCTCCTCAAAAG",1,7.91,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F17L Q84K A89V L95A Q168L",5
"lib1","SARS-CoV-2","CTGATCTTTGACTTTT",2,6.07,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41K S45L P82Q",3
"lib1","SARS-CoV-2","CTGATGAACGCGTAAC",4,15.93,6,-4.76,2,3,1.27,0,">1 nonsynonymous","A14E T46K G86H A89T A105Y T170L V181Y",7
"lib1","SARS-CoV-2","CTGATGACCCCACACA",4,210.01,6,-4.76,1.49,1.5,1.15,0.01,">1 nonsynonymous","V77C R127H",2
"lib1","SARS-CoV-2","CTGATGAGCTAGAGTA",4,0.15,NA,NA,NA,NA,NA,NA,"stop","T15S Y21H S147* V181R",4
"lib1","SARS-CoV-2","CTGATGAGCTAGTCAC",7,92.2,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","F44S E76N N107W Y119G D137S",5
"lib1","SARS-CoV-2","CTGATGATAAAAATAT",5,78.27,6,-4.76,0.85,1.5,1.23,0.01,">1 nonsynonymous","N118P Y175Q",2
"lib1","SARS-CoV-2","CTGATGCAAACAGGAA",4,20.29,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D34P C61W D68K K94T T201L",5
"lib1","SARS-CoV-2","CTGATGCAATTGTACA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2A T63* V77N L95C",4
"lib1","SARS-CoV-2","CTGATGCAGAAAAGCA",6,29.2,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S19M S36T A67G I88G Q168T S184F",6
"lib1","SARS-CoV-2","CTGATGCCGATTGGTG",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R N58H G152F",3
"lib1","SARS-CoV-2","CTGATGCGCATAATCA",2,19.45,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","G83V K94E D98M S113N L162P",5
"lib1","SARS-CoV-2","CTGATGGACTACACTT",2,23.92,6,-4.76,2,3,1.15,0,">1 nonsynonymous","W106S N157H V180R",3
"lib1","SARS-CoV-2","CTGATGGTCTATCATA",2,33.73,10.8,0.03,0.12,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGATGGTTAAAATAG",3,29.45,6.95,-3.82,0.43,1.5,1.21,0.04,">1 nonsynonymous","V71N D97I P197F",3
"lib1","SARS-CoV-2","CTGATGGTTTGGTTGA",2,11.92,8.69,-2.08,0.09,2.02,1.01,0,">1 nonsynonymous","T55G Y165T",2
"lib1","SARS-CoV-2","CTGATGTACACTTGCA",1,7.85,10,-0.77,0.15,2.89,1,0.01,">1 nonsynonymous","F99W Y119R",2
"lib1","SARS-CoV-2","CTGATGTACGAGACTT",5,30,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D137A Y159P",2
"lib1","SARS-CoV-2","CTGATGTATCCTAATT",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88T Y121T T170V",3
"lib1","SARS-CoV-2","CTGATGTCCCTGCCTC",4,0.17,NA,NA,NA,NA,NA,NA,"stop","S129* P149E",2
"lib1","SARS-CoV-2","CTGATGTGGGAGTATC",3,115.64,10.81,0.05,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGATTAACACGGAGA",2,55.94,10.71,-0.05,0.03,2.98,1,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CTGATTAACAGCCAGG",3,101.13,9.33,-1.44,0.09,2.74,1.15,0,">1 nonsynonymous","G117R T201A",2
"lib1","SARS-CoV-2","CTGATTAAGAGTCTAG",5,54.94,10.74,-0.03,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGATTAAGATAAAAG",3,16.32,6.22,-4.55,0.53,1.5,1.07,0.01,">1 nonsynonymous","N120R F126S F134S Y178P",4
"lib1","SARS-CoV-2","CTGATTACAATCAAAT",4,46.13,8,-2.77,0.38,1.5,1.13,0.05,">1 nonsynonymous","I104S L125C Q168M",3
"lib1","SARS-CoV-2","CTGATTACAGTGCTGG",3,6.19,10.8,0.04,0.17,2.62,1.05,0.03,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","CTGATTAGAGATAGAT",2,26.55,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2R P96D W106D K199N",4
"lib1","SARS-CoV-2","CTGATTAGCATCCCAA",6,0,NA,NA,NA,NA,NA,NA,"stop","V37* C49G G83V N92M L122Q",5
"lib1","SARS-CoV-2","CTGATTAGGTGTGATG",7,66.91,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N4T A67P F70S Y93G S147P",5
"lib1","SARS-CoV-2","CTGATTAGTCCCATAT",1,15.33,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N40S S45A C150E",3
"lib1","SARS-CoV-2","CTGATTAGTCTCATCC",3,0.85,NA,NA,NA,NA,NA,NA,"stop","F99* W106R K114F T201W",4
"lib1","SARS-CoV-2","CTGATTATAATGACTT",9,45.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2T G9A R179F",3
"lib1","SARS-CoV-2","CTGATTATAATTTACT",4,115.74,10.51,-0.25,0.03,2.88,1.02,0,"1 nonsynonymous","L57F",1
"lib1","SARS-CoV-2","CTGATTCAAATGAAAA",11,168.45,8.64,-2.12,0.19,1.5,1.06,0.02,">1 nonsynonymous","G9A G83V P161E",3
"lib1","SARS-CoV-2","CTGATTCAACGTACAC",6,53.91,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Q84P N92S T100S L122Y",4
"lib1","SARS-CoV-2","CTGATTCAATTATAAT",10,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S I80K G86M N92G",4
"lib1","SARS-CoV-2","CTGATTCATTTGAAAG",2,54.21,8.79,-1.97,0.06,2.61,1.09,0,">1 nonsynonymous","G9D S36Y Y121N F156K",4
"lib1","SARS-CoV-2","CTGATTCCCCACTAAC",7,119.38,6.13,-4.64,1.03,1.5,1.23,0.03,">1 nonsynonymous","L57S P96S N130F I138E",4
"lib1","SARS-CoV-2","CTGATTCTACTGCCAA",3,6.1,6.18,-4.58,0.85,3,1.06,0.02,">1 nonsynonymous","Q84P Y91S N118C",3
"lib1","SARS-CoV-2","CTGATTGAACCATTAA",8,20.95,6.39,-4.37,0.86,1.5,1.18,0.08,">1 nonsynonymous","R179G P191L",2
"lib1","SARS-CoV-2","CTGATTGAACCGTACG",6,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133G Y143S T170L",3
"lib1","SARS-CoV-2","CTGATTGATTCCATAC",6,129.64,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","R136L P177K K198T",3
"lib1","SARS-CoV-2","CTGATTTAACCCATAC",13,60.49,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T63I D98G L131C S139V R179M T201D",6
"lib1","SARS-CoV-2","CTGATTTAAGACGATA",1,18.03,9.99,-0.77,0.24,1.98,1.04,0.02,">1 nonsynonymous","T3V P96C",2
"lib1","SARS-CoV-2","CTGATTTAAGCATCTC",2,11.82,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K87Y F99T V115L Y143R P161G Y165F",6
"lib1","SARS-CoV-2","CTGATTTAAGGATACA",6,8.79,NA,NA,NA,NA,NA,NA,"stop","V103* S139T V173P",3
"lib1","SARS-CoV-2","CTGATTTACGAAGGAA",3,77.23,6,-4.76,2,3,1.2,0,">1 nonsynonymous","R27S D98E S113H V153W",4
"lib1","SARS-CoV-2","CTGATTTATCTGTGTT",4,98.25,10.68,-0.08,0.04,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGATTTCGGTGAACA",6,32.02,6.53,-4.24,0.5,1.5,1.1,0.02,">1 nonsynonymous","V37D A105L P149R N157I",4
"lib1","SARS-CoV-2","CTGATTTTCATATTAC",4,44.66,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","F12D A105F",2
"lib1","SARS-CoV-2","CTGATTTTCTGTGCGG",2,40.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39R G101I T201L",3
"lib1","SARS-CoV-2","CTGATTTTTGAAACGC",5,58.66,10.58,-0.19,0.05,2.98,1,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","CTGCAAAATTCAGTAC",1,85.87,10.75,-0.02,0.05,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCAAACCACGTATG",2,0.85,NA,NA,NA,NA,NA,NA,"stop","D90* N120I",2
"lib1","SARS-CoV-2","CTGCAAACTTTCCGGC",2,39.81,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A22R A67F G146L",3
"lib1","SARS-CoV-2","CTGCAAAGATAAGTGG",11,1.15,NA,NA,NA,NA,NA,NA,"stop","D68* K114C",2
"lib1","SARS-CoV-2","CTGCAAAGTAAACAAT",1,13.26,9.81,-0.95,0.17,2.32,1.03,0.01,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","CTGCAAATATCCGTGA",1,37.86,9.37,-1.4,0.13,1.83,1.13,0.01,">1 nonsynonymous","C6V D98A T148Y",3
"lib1","SARS-CoV-2","CTGCAAATTAAAACTT",8,64.52,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N24Y V103W Y123S",3
"lib1","SARS-CoV-2","CTGCAAATTTAATGAA",1,6.51,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","F8M S29E Y91I G116Q D137S",5
"lib1","SARS-CoV-2","CTGCAACAAATCAACC",7,0.93,NA,NA,NA,NA,NA,NA,"stop","C61* Y178H",2
"lib1","SARS-CoV-2","CTGCAACAGGAGAATT",4,1.42,NA,NA,NA,NA,NA,NA,"stop","L5* S53N G101I P149N E154D",5
"lib1","SARS-CoV-2","CTGCAACATTATACCA",3,74.93,10.05,-0.71,0.12,2.47,1.03,0.01,">1 nonsynonymous","T15K Y35S K56M Y91F A105Y L122Y",6
"lib1","SARS-CoV-2","CTGCAACTCCGTTTTG",4,4.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","CTGCAAGACACACACT",3,1.38,NA,NA,NA,NA,NA,NA,"stop","C6P A89S Y123* K128R Q168R",5
"lib1","SARS-CoV-2","CTGCAAGATATGTAAT",2,27.88,8.18,-2.58,0.16,1.73,1.09,0.01,">1 nonsynonymous","C6F I88L",2
"lib1","SARS-CoV-2","CTGCAAGCAGATGTTT",8,25.3,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","S41P I80N T100A I104A S129V",5
"lib1","SARS-CoV-2","CTGCAAGCTCCAAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","P7M K48S N64* T100F I142N",5
"lib1","SARS-CoV-2","CTGCAAGTAGTTTAAA",5,36.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V32W K94F F126W S139W",4
"lib1","SARS-CoV-2","CTGCAAGTTCCGTTTA",2,11.08,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","CTGCAATAAACCATAT",1,16.31,10.53,-0.23,0.07,3,1.04,0,"1 nonsynonymous","N64I",1
"lib1","SARS-CoV-2","CTGCAATCCCATTTAC",8,108.68,8.08,-2.69,0.21,1.5,1.12,0.01,">1 nonsynonymous","Y50T G146T",2
"lib1","SARS-CoV-2","CTGCAATCGTAATGGC",1,6.53,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13P Y66C A89V N130K P149S",5
"lib1","SARS-CoV-2","CTGCACAAAGCCCCCA",1,0.61,NA,NA,NA,NA,NA,NA,"stop","F8E A22* R73Q N107P",4
"lib1","SARS-CoV-2","CTGCACAACCATCTGA",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57I Y121S",2
"lib1","SARS-CoV-2","CTGCACAATCTAAGAA",1,22.97,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F17S S45M G86C L188A",4
"lib1","SARS-CoV-2","CTGCACACAATTCCAT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","T15F C61S A67I Y91T P96A N118* E141S K199V",8
"lib1","SARS-CoV-2","CTGCACACGGGTTGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","T100* P133G T148D L162G",4
"lib1","SARS-CoV-2","CTGCACAGAAACTAGC",1,25.51,9.04,-1.72,0.2,1.65,1.15,0.02,">1 nonsynonymous","S41Q Y50I N64F A192Y",4
"lib1","SARS-CoV-2","CTGCACAGGCTATGAA",3,114.93,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23G Y50H Y143T T201V",4
"lib1","SARS-CoV-2","CTGCACATAGAATTAG",2,41.31,9.01,-1.75,0.13,1.66,1.1,0.01,">1 nonsynonymous","V71T R136V",2
"lib1","SARS-CoV-2","CTGCACATGTTCCACT",4,30.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9T T63Y L95S F134R",4
"lib1","SARS-CoV-2","CTGCACCAAAATAAAA",2,25.29,9.54,-1.23,0.23,1.76,1.18,0.02,">1 nonsynonymous","E154M L162C",2
"lib1","SARS-CoV-2","CTGCACCAAATCACAT",2,12.96,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12G F99D P149S C158L",4
"lib1","SARS-CoV-2","CTGCACCACGACAAAT",4,104.3,10.4,-0.36,0.05,2.87,1.02,0,">1 nonsynonymous","G9V R16W",2
"lib1","SARS-CoV-2","CTGCACCCATATTATT",7,77.18,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F62S G83K D112S K128R",4
"lib1","SARS-CoV-2","CTGCACCCGTCAAACG",13,18.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S45L D68K G86H",3
"lib1","SARS-CoV-2","CTGCACCGGACACGCA",11,0.29,NA,NA,NA,NA,NA,NA,"stop","I2* L60Q S69R G74P E154*",5
"lib1","SARS-CoV-2","CTGCACCGTTAGTGCA",10,95.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3I A18R G83N A89N I138F",5
"lib1","SARS-CoV-2","CTGCACCTACTAAGAG",3,36.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2Y K26R A81L V103T Y119S K132T",6
"lib1","SARS-CoV-2","CTGCACCTTTCCTTAC",5,16.31,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","N4K A14P Y50V G146E Y165E T170D",6
"lib1","SARS-CoV-2","CTGCACGACTAAGGTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138M",1
"lib1","SARS-CoV-2","CTGCACTAAAAGACCG",5,2.45,NA,NA,NA,NA,NA,NA,"stop","F156* Y175S",2
"lib1","SARS-CoV-2","CTGCACTTTAAATCAG",1,2.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160Y",1
"lib1","SARS-CoV-2","CTGCAGAACCAGGAAA",1,51.88,10.78,0.01,0.06,2.98,1,0,">1 nonsynonymous","I2H A192N",2
"lib1","SARS-CoV-2","CTGCAGAATTTATATC",3,15.11,10.43,-0.34,0.07,2.88,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCAGACTTGACTAG",6,48.94,10.57,-0.19,0.07,2.87,1.01,0,">1 nonsynonymous","N107Q P197M",2
"lib1","SARS-CoV-2","CTGCAGCAGACAAAGA",2,10.1,6,-4.76,2,3,1.18,0,">1 nonsynonymous","E10F N40C G83H D98M G117V E141M",6
"lib1","SARS-CoV-2","CTGCAGCCAAGAGCTA",2,11.84,7.55,-3.21,0.39,1.5,1,0.06,">1 nonsynonymous","N40L D90S Y165C",3
"lib1","SARS-CoV-2","CTGCAGCGTACAAAGG",1,12.87,9.5,-1.27,0.13,2.71,1.12,0.01,">1 nonsynonymous","A22M Y35M G155T G174R",4
"lib1","SARS-CoV-2","CTGCAGCTATATAGGG",5,39.6,9.41,-1.35,0.16,2.68,1.19,0.01,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","CTGCAGGAATGAGTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A A105P T140I",3
"lib1","SARS-CoV-2","CTGCAGTTATTGAAAA",4,21.4,8.58,-2.18,0.15,1.8,1.15,0.01,">1 nonsynonymous","A22V N107S",2
"lib1","SARS-CoV-2","CTGCATAAACAGTAAT",3,18.38,6.31,-4.45,0.94,1.5,1.3,0.07,">1 nonsynonymous","N13S V77E K132Q",3
"lib1","SARS-CoV-2","CTGCATAATGCGCATA",3,19.52,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","R25A A81F Y143I E154D Q163N V181A",6
"lib1","SARS-CoV-2","CTGCATACAAATAATC",2,33.95,9.8,-0.96,0.12,1.96,1,0.01,">1 nonsynonymous","I104H I138Q K199E",3
"lib1","SARS-CoV-2","CTGCATACATAAAGAG",3,12.89,10.72,-0.04,0.08,2.86,1.04,0,"1 nonsynonymous","F134S",1
"lib1","SARS-CoV-2","CTGCATACTAACGCCG",3,74.37,10.66,-0.11,0.07,2.9,1.07,0,"1 nonsynonymous","K26I",1
"lib1","SARS-CoV-2","CTGCATAGACTCCAAA",7,201.55,8.38,-2.39,0.14,2.4,1.11,0.01,">1 nonsynonymous","A145F Y159I H189V",3
"lib1","SARS-CoV-2","CTGCATAGAGGAATCA",1,20.18,10.35,-0.42,0.07,2.85,1.11,0,">1 nonsynonymous","E10V I104M",2
"lib1","SARS-CoV-2","CTGCATATATAGCCGC",2,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Y T85M N107L I142L P197Y",5
"lib1","SARS-CoV-2","CTGCATCAAAGATCAA",1,26.24,10.78,0.02,0.09,2.98,1.01,0,"1 nonsynonymous","S43D",1
"lib1","SARS-CoV-2","CTGCATCAACTCACAG",3,54.66,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T15Y Y66E L125D",3
"lib1","SARS-CoV-2","CTGCATCAAGCATATT",6,76.93,10.56,-0.2,0.05,2.9,1.02,0,">1 nonsynonymous","T55E E76T K87V",3
"lib1","SARS-CoV-2","CTGCATCATATTGTAA",5,24.01,6.09,-4.67,0.56,1.5,1.12,0.01,">1 nonsynonymous","S19Q S36F G86C N107I S200A",5
"lib1","SARS-CoV-2","CTGCATCCAAATCCGC",3,164.16,9.56,-1.2,0.09,2.71,1.08,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","CTGCATCCAGGTCCGC",1,19.23,8.78,-1.99,0.29,1.61,1.07,0.03,">1 nonsynonymous","Y123R F167L",2
"lib1","SARS-CoV-2","CTGCATCCATAGGGAC",6,17.96,10.8,0.04,0.09,2.95,1,0,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","CTGCATCGAAACATTA",11,43.28,7.97,-2.79,0.23,1.5,1.11,0.02,">1 nonsynonymous","S19L K87A",2
"lib1","SARS-CoV-2","CTGCATGATATAAAAA",1,11.03,6,-4.76,2,3,1.06,0,">1 nonsynonymous","R25G G51L F160P",3
"lib1","SARS-CoV-2","CTGCATGGTGCGTTTA",2,53.65,10.59,-0.17,0.05,2.94,1.03,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","CTGCATTTAACCTGAT",8,31.8,6.63,-4.14,0.54,1.5,1.14,0.05,">1 nonsynonymous","C49R Y91M",2
"lib1","SARS-CoV-2","CTGCCAAATAGAAACC",9,144.47,10.4,-0.37,0.04,2.88,1.01,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","CTGCCAAATCTGTAAT",9,186.47,10.03,-0.73,0.08,2.63,1.04,0,">1 nonsynonymous","V11L V32L Y91L",3
"lib1","SARS-CoV-2","CTGCCAAGACCAACCT",13,61.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I2L V20W S41P D97I I142Q",5
"lib1","SARS-CoV-2","CTGCCACATCAGGACG",3,5.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S V103L V153D T170H",4
"lib1","SARS-CoV-2","CTGCCACCGAAGACGA",8,36.43,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T46P G74H I88A S147I",4
"lib1","SARS-CoV-2","CTGCCACCTAGGACGA",4,40.53,10.81,0.05,0.09,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGCCACTTTTACCCG",4,60.19,8.32,-2.44,0.14,2.79,1.09,0.01,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","CTGCCAGGGGCAACTT",4,31.63,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R16V T55H A81M E141P Y159S",5
"lib1","SARS-CoV-2","CTGCCAGGTTTTAGCA",4,20.14,10.41,-0.35,0.09,2.91,1.02,0,">1 nonsynonymous","G9N E135V S184V",3
"lib1","SARS-CoV-2","CTGCCAGTAGAATCGT",9,60.99,10.17,-0.59,0.08,2.81,1.04,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","CTGCCAGTTCAATTAG",3,56.68,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","L5Y Y93H Y143L Y178N",4
"lib1","SARS-CoV-2","CTGCCATAGTGGCATG",9,47.67,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S129V Y165C V180I",3
"lib1","SARS-CoV-2","CTGCCATTATAGTAAG",1,52.79,8.52,-2.24,0.12,2.37,1.12,0.01,">1 nonsynonymous","G9F L125Q F134D P149C",4
"lib1","SARS-CoV-2","CTGCCCAACAATTACA",5,22.43,9.32,-1.45,0.31,1.5,1.06,0.04,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","CTGCCCAAGTTTACAA",2,3.14,NA,NA,NA,NA,NA,NA,"stop","K114I Y143*",2
"lib1","SARS-CoV-2","CTGCCCAATGCGCAAT",4,122.66,10.69,-0.08,0.04,2.84,1.09,0,"1 nonsynonymous","S69T",1
"lib1","SARS-CoV-2","CTGCCCACGTTCAAAA",8,83.81,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T63H S139D C150F",3
"lib1","SARS-CoV-2","CTGCCCAGAGTAATGA",1,7.79,8.31,-2.45,0.42,1.5,1,0.05,">1 nonsynonymous","Q84S F99V N151V",3
"lib1","SARS-CoV-2","CTGCCCATATTTAGTA",1,20.41,10.5,-0.26,0.06,2.91,1.03,0,">1 nonsynonymous","N30A V37N",2
"lib1","SARS-CoV-2","CTGCCCATCGAACATA",5,47.94,10.15,-0.61,0.08,2.71,1.03,0,">1 nonsynonymous","V32I D97F K132G S184A",4
"lib1","SARS-CoV-2","CTGCCCGAAACACACG",4,60.42,10.76,0,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCCCGACACACCCC",8,72.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68W Y91P A105S S113T",4
"lib1","SARS-CoV-2","CTGCCCGACATGAATT",1,21.95,10.08,-0.68,0.15,2.43,1.01,0.02,">1 nonsynonymous","T15D Y91A L122M",3
"lib1","SARS-CoV-2","CTGCCCGCAGGCTAGT",1,33.96,10.62,-0.14,0.08,2.95,1.01,0,"1 nonsynonymous","R78V",1
"lib1","SARS-CoV-2","CTGCCCTAAACTCATA",1,18.24,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A81M A89Y T148G N157Y",4
"lib1","SARS-CoV-2","CTGCCGATTAAGTAAG",1,2.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101D",1
"lib1","SARS-CoV-2","CTGCCGCAAAGACAAC",4,23.74,6,-4.76,1.39,1.5,1.18,0.02,">1 nonsynonymous","K48P G83Y P133C",3
"lib1","SARS-CoV-2","CTGCCGCATCCGCGAA",8,86.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88D G155C",2
"lib1","SARS-CoV-2","CTGCCGCTCTGAACGG",1,0.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","CTGCCGGTTAATTTTT",2,37.8,10.33,-0.43,0.05,2.91,1.01,0,">1 nonsynonymous","Y35T N64D",2
"lib1","SARS-CoV-2","CTGCCGTACAATGCAA",2,21.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43L S113D P161K",3
"lib1","SARS-CoV-2","CTGCCTAAAGCACCTT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","K128E Y178E S184* K198Q",4
"lib1","SARS-CoV-2","CTGCCTAGAAGCGACG",4,30.26,6.94,-3.82,0.28,1.5,1.12,0.02,">1 nonsynonymous","A42W D90H I142R",3
"lib1","SARS-CoV-2","CTGCCTATCTCCCGTC",12,57.72,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I2M G51Y A67G V180N",4
"lib1","SARS-CoV-2","CTGCCTATGCTGTGAA",5,16.08,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y93H K114G R124Y",3
"lib1","SARS-CoV-2","CTGCCTCTCGGATTGC",10,78.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14C L57S D90V V115G G172T",5
"lib1","SARS-CoV-2","CTGCCTGGTATCCTAC",5,61.28,10.62,-0.15,0.04,2.96,1,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","CTGCCTGTCTTTAATG",2,31.07,10.84,0.07,0.06,2.93,1.03,0,">1 nonsynonymous","Y39I I142L",2
"lib1","SARS-CoV-2","CTGCCTTAACAAGTAT",10,5.63,NA,NA,NA,NA,NA,NA,"stop","N4T S36* V103F",3
"lib1","SARS-CoV-2","CTGCCTTTTAATAGAT",9,138.04,10.35,-0.41,0.04,2.96,1.01,0,">1 nonsynonymous","S19N K87R",2
"lib1","SARS-CoV-2","CTGCGAAATTTAATCT",2,18.34,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","E10H S129L L162S",3
"lib1","SARS-CoV-2","CTGCGAAGCGACGCCT",7,118.7,10.54,-0.23,0.06,2.89,1.02,0,"1 nonsynonymous","L183M",1
"lib1","SARS-CoV-2","CTGCGAATATTCCGTA",7,97.57,9.86,-0.9,0.07,1.88,1.07,0,"1 nonsynonymous","R127M",1
"lib1","SARS-CoV-2","CTGCGAATCTTGGGTA",1,7.08,10.8,0.04,0.08,2.74,1.24,0,">1 nonsynonymous","N120G E154N",2
"lib1","SARS-CoV-2","CTGCGACCATAATAGA",13,53.69,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","W23F W106R C158Y",3
"lib1","SARS-CoV-2","CTGCGACGATAAGTCG",18,246.72,10.73,-0.03,0.04,2.92,1.03,0,"1 nonsynonymous","N64K",1
"lib1","SARS-CoV-2","CTGCGACTAAAGACCA",6,38.4,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","L60K F134D E141S N171K",4
"lib1","SARS-CoV-2","CTGCGAGACAGGTTAG",2,83.89,10.69,-0.07,0.05,2.94,1.02,0,"1 nonsynonymous","N64C",1
"lib1","SARS-CoV-2","CTGCGAGCTCAAAAGA",3,71.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86L Q176R S184L",3
"lib1","SARS-CoV-2","CTGCGATCCAGCGTCC",2,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N K56R Q84F I104S",4
"lib1","SARS-CoV-2","CTGCGCAAAAGGGAAC",10,94.17,6,-4.76,1.53,1.5,1.21,0.01,">1 nonsynonymous","S41T V52P W106A V115R",4
"lib1","SARS-CoV-2","CTGCGCAAGTGTATTA",2,44.62,10.26,-0.5,0.04,2.9,1.05,0,"1 nonsynonymous","T170Q",1
"lib1","SARS-CoV-2","CTGCGCACAGAGACCT",1,16.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8S D90I S147K P161F",4
"lib1","SARS-CoV-2","CTGCGCATAAACCCAA",2,10.12,10.54,-0.23,0.1,2.9,1.07,0,">1 nonsynonymous","D59V V153R",2
"lib1","SARS-CoV-2","CTGCGCATAACAAATT",5,33.67,10.45,-0.31,0.12,2.78,1.09,0.01,"1 nonsynonymous","E186Y",1
"lib1","SARS-CoV-2","CTGCGCATTGCGCAGA",2,55.32,9.01,-1.75,0.31,1.5,1,0.04,">1 nonsynonymous","Y66G A81S L122G S164K",4
"lib1","SARS-CoV-2","CTGCGCCATGCCACTA",1,36.22,10.4,-0.36,0.06,2.97,1.01,0,">1 nonsynonymous","L5K N64R K128L E154A",4
"lib1","SARS-CoV-2","CTGCGCCATTAGATAG",3,38.01,10.57,-0.19,0.06,2.86,1.12,0,">1 nonsynonymous","D59E Q84R",2
"lib1","SARS-CoV-2","CTGCGCCATTCAAAAC",7,0.05,NA,NA,NA,NA,NA,NA,"stop","N13* A33* T46D L60*",4
"lib1","SARS-CoV-2","CTGCGCTAAGAATTGG",2,0.78,NA,NA,NA,NA,NA,NA,"stop","W106* R179N",2
"lib1","SARS-CoV-2","CTGCGCTCCTGACGCG",8,4.39,NA,NA,NA,NA,NA,NA,"stop","R16D R27V L60* A81G K128Y F134Q F160Y R179G K199L",9
"lib1","SARS-CoV-2","CTGCGCTGGCCCGATG",2,53.39,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","CTGCGCTTGATATTCT",7,66.09,9.92,-0.85,0.08,2.66,1.11,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","CTGCGCTTTGAATTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","P96I V103G N151* F156V",4
"lib1","SARS-CoV-2","CTGCGGAGCTCTACAA",1,28.68,8.61,-2.15,0.1,2.85,1.06,0,"1 nonsynonymous","S113Q",1
"lib1","SARS-CoV-2","CTGCGGCCAAAAACAT",4,64.08,8.37,-2.4,0.2,2.55,1.16,0.02,">1 nonsynonymous","I28Y N171D",2
"lib1","SARS-CoV-2","CTGCGGCGCAAGTAGT",6,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N64T V182D",3
"lib1","SARS-CoV-2","CTGCGGGACGTCTCCA",2,23.56,6,-4.76,2,3,1.08,0,"1 nonsynonymous","G101K",1
"lib1","SARS-CoV-2","CTGCGGTATACTTCGC",2,31.7,10.47,-0.29,0.06,2.89,1.07,0,">1 nonsynonymous","D97N Y121L",2
"lib1","SARS-CoV-2","CTGCGTACCCCCATCC",9,95.74,10.69,-0.08,0.08,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCGTATGGATGTAT",5,32.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y39L N107T Y165S",3
"lib1","SARS-CoV-2","CTGCGTGGAGGGCCAA",1,5.94,10.19,-0.58,0.16,2.83,1.08,0,">1 nonsynonymous","N64Q D97Q N109V",3
"lib1","SARS-CoV-2","CTGCGTGTCATCATGA",2,22.76,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","C61S S69M L95F V103K T170A Q176G",6
"lib1","SARS-CoV-2","CTGCTAAAAATATATG",3,22.1,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D75L D98S S113F G174L K198L",5
"lib1","SARS-CoV-2","CTGCTAAGAACCAACA",1,16.17,9.35,-1.42,0.36,1.57,1.06,0.06,">1 nonsynonymous","T15K S36V G83V S147P F156S",5
"lib1","SARS-CoV-2","CTGCTAAGTAAATAAA",2,34.43,10.94,0.17,0.09,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCTAATAACAGTAT",3,42.36,10.69,-0.07,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCTAATGATAGTAT",1,10.32,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","T63H S69W L95G Y119G Y165S T201W",6
"lib1","SARS-CoV-2","CTGCTAATTAGTGTTG",12,89.32,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","T15F Q176T",2
"lib1","SARS-CoV-2","CTGCTACAACAAGAAG",5,70.17,10.6,-0.17,0.06,2.95,1.03,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","CTGCTACCCTTACATT",3,54.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26G E135S A145E V173L",4
"lib1","SARS-CoV-2","CTGCTACGCGCGGCGT",3,70.11,10.7,-0.07,0.09,2.86,1.09,0,"1 nonsynonymous","T140M",1
"lib1","SARS-CoV-2","CTGCTAGTAGACTCAA",3,49.31,9,-1.76,0.18,1.55,1.12,0.01,">1 nonsynonymous","E10S V37R K48E Y91S E154S",5
"lib1","SARS-CoV-2","CTGCTAGTCGCAGAAG",1,41.84,10.65,-0.11,0.06,2.89,1.07,0,">1 nonsynonymous","S129A E141K",2
"lib1","SARS-CoV-2","CTGCTAGTGCGGTATT",1,8.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V G146Y P161T",3
"lib1","SARS-CoV-2","CTGCTATACCAAGAAA",7,56.27,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","D68L",1
"lib1","SARS-CoV-2","CTGCTATACCATGGGA",8,169.08,10.82,0.06,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCTATCCACCATAA",1,53.83,10.57,-0.2,0.09,2.89,1.06,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","CTGCTATGTCATGCCC",3,6.05,9.87,-0.89,0.21,2.86,1.04,0.01,">1 nonsynonymous","L5Y N24I I138V A145S",4
"lib1","SARS-CoV-2","CTGCTCACGATTACAA",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122K G174R",2
"lib1","SARS-CoV-2","CTGCTCAGTGATAATC",6,116.47,10.4,-0.36,0.05,2.84,1.03,0,">1 nonsynonymous","L57I I138A",2
"lib1","SARS-CoV-2","CTGCTCAGTTGTATCG",12,51.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43I W106D",2
"lib1","SARS-CoV-2","CTGCTCCTTGACGTAG",2,29.72,10.74,-0.02,0.09,2.95,1.03,0,">1 nonsynonymous","L5G T201S",2
"lib1","SARS-CoV-2","CTGCTCGACAAAGGCT",8,1.3,NA,NA,NA,NA,NA,NA,"stop","T100* S139R Q163Y",3
"lib1","SARS-CoV-2","CTGCTCGCGATATCAT",1,30.17,10.42,-0.35,0.07,2.8,1.05,0,">1 nonsynonymous","N4K S41P D90R",3
"lib1","SARS-CoV-2","CTGCTCGTATGAAAAT",4,14.94,6.15,-4.62,0.82,2.03,1.25,0.02,">1 nonsynonymous","S45A V103R G152Q",3
"lib1","SARS-CoV-2","CTGCTCGTGCCGTACC",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R N64P P161A",3
"lib1","SARS-CoV-2","CTGCTCTGTGGTTGAT",2,46.57,9.59,-1.18,0.08,2.76,1.07,0,">1 nonsynonymous","N24S S45D G74M L187C",4
"lib1","SARS-CoV-2","CTGCTCTGTTCCCTAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","CTGCTCTTTTACGTAC",2,10.84,10.07,-0.69,0.11,2.9,1.08,0,"1 nonsynonymous","P169Q",1
"lib1","SARS-CoV-2","CTGCTGAATGCGGCAG",2,30.67,10.73,-0.04,0.08,2.94,1.02,0.01,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","CTGCTGACGCGGGATT",1,50.28,10.53,-0.23,0.06,2.97,1,0,">1 nonsynonymous","S43A C61I R73K",3
"lib1","SARS-CoV-2","CTGCTGCATAACCATC",4,0.02,NA,NA,NA,NA,NA,NA,"stop","D98V D137N K199*",3
"lib1","SARS-CoV-2","CTGCTGCATAACTAAT",3,28.38,6.8,-3.97,0.6,1.5,1.07,0.06,">1 nonsynonymous","L5P P96F A105L Y143V",4
"lib1","SARS-CoV-2","CTGCTGGCAAAGACGT",27,145.59,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","CTGCTGTTCATGGAAA",9,6.36,NA,NA,NA,NA,NA,NA,"stop","I2L P54I G86Y Y93W S129*",5
"lib1","SARS-CoV-2","CTGCTGTTGGTTCTGC",6,39.31,8.02,-2.74,0.38,1.5,1,0.06,">1 nonsynonymous","A81Y D98I",2
"lib1","SARS-CoV-2","CTGCTTAAAGACATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* C61S N120H",3
"lib1","SARS-CoV-2","CTGCTTAACACACCCA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","L5Q V37C C49G L122M L131S T201*",6
"lib1","SARS-CoV-2","CTGCTTACTACTCACG",7,144.15,10.73,-0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCTTATCCTTTTAG",8,169.54,9.97,-0.8,0.07,2.07,1.07,0,"1 nonsynonymous","V181A",1
"lib1","SARS-CoV-2","CTGCTTCACAATCACA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","I28S R78H C102P Y165*",4
"lib1","SARS-CoV-2","CTGCTTCGTTTAGAAC",3,54.08,6,-4.76,1.37,1.5,1.18,0.01,">1 nonsynonymous","A81D N118A P169R Y178L",4
"lib1","SARS-CoV-2","CTGCTTCTAAGAAAAG",3,31.36,10.74,-0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGCTTCTATTAACTA",4,39.9,9.53,-1.24,0.16,2.22,1.07,0.01,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","CTGCTTGAAAAGAGCC",3,25.31,6.07,-4.69,0.92,1.5,1.21,0.02,">1 nonsynonymous","G101L F160N",2
"lib1","SARS-CoV-2","CTGCTTGAAACGGACC",3,25.36,10.93,0.16,0.12,2.83,1,0,"1 nonsynonymous","K199M",1
"lib1","SARS-CoV-2","CTGCTTGAGCCAACAG",2,0.83,NA,NA,NA,NA,NA,NA,"stop","Y35* N110M K114W C150E Q168L K198M",6
"lib1","SARS-CoV-2","CTGCTTGGCTGTGTGA",1,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V S43C G117M",3
"lib1","SARS-CoV-2","CTGCTTGTATGCAAGT",3,34.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","CTGCTTTGCATAGAAA",2,25.38,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","V71M G83N Y93V D97T E154T",5
"lib1","SARS-CoV-2","CTGGAAAAAATCACGT",1,8.32,NA,NA,NA,NA,NA,NA,"stop","K56S T63S D97L W106V K132M E141* L183G",7
"lib1","SARS-CoV-2","CTGGAAAAACCACTCG",10,230.87,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S45R Y50M L57P N107L",4
"lib1","SARS-CoV-2","CTGGAAAAGGTATGTA",4,28.15,6.05,-4.72,0.69,1.5,1.13,0.02,">1 nonsynonymous","G86V C102T Y119L T148V V181T",5
"lib1","SARS-CoV-2","CTGGAAACAAACTACG",1,19.6,9.44,-1.32,0.27,1.61,1.11,0.03,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","CTGGAAAGGACCAATG",5,21.73,6.95,-3.81,0.33,1.5,1.14,0.03,">1 nonsynonymous","P96V Y123L T201H",3
"lib1","SARS-CoV-2","CTGGAAAGGATCTACT",5,94.97,10.73,-0.04,0.06,2.85,1.08,0,">1 nonsynonymous","D59E K198A",2
"lib1","SARS-CoV-2","CTGGAAATACTCCTAC",5,46.02,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I88E T201G",2
"lib1","SARS-CoV-2","CTGGAAATGAGACTTG",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P R179S",2
"lib1","SARS-CoV-2","CTGGAAATGCATACCC",7,92.31,6.03,-4.74,1.22,1.5,1.23,0.03,">1 nonsynonymous","G9P N64L A81K Y123T",4
"lib1","SARS-CoV-2","CTGGAAATTCATTCGT",2,44.68,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A33P Y91V R127I N151D Q168C",5
"lib1","SARS-CoV-2","CTGGAACCAGAATACA",1,43.36,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F17M F44T P177Q",3
"lib1","SARS-CoV-2","CTGGAACGACCTAATG",6,52.05,10.31,-0.45,0.04,2.91,1.04,0,">1 nonsynonymous","C6F S43Q K132S",3
"lib1","SARS-CoV-2","CTGGAACGCACCAACG",4,17.37,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F8N R25S T63G W106R L131S T140G E186L",7
"lib1","SARS-CoV-2","CTGGAACTCTGTAACT",5,156.02,9.68,-1.09,0.09,2.43,1.04,0,">1 nonsynonymous","K48C G155W",2
"lib1","SARS-CoV-2","CTGGAAGCTGAAAATA",3,42.44,6.84,-3.93,0.4,1.5,1.08,0.04,">1 nonsynonymous","F8E C150E Y165H",3
"lib1","SARS-CoV-2","CTGGAAGTCATTTAGA",1,19.12,10.34,-0.43,0.13,2.22,1,0.01,">1 nonsynonymous","L5C N40T F44R",3
"lib1","SARS-CoV-2","CTGGAAGTCTCGTCCC",9,15.84,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","CTGGAAGTGACCCTTG",4,115.72,10.71,-0.05,0.06,2.88,1.08,0,">1 nonsynonymous","S129D H189T",2
"lib1","SARS-CoV-2","CTGGAAGTTGAAAGTC",15,87.78,9.69,-1.07,0.38,1.5,1,0.07,">1 nonsynonymous","Y50I W106R N130F",3
"lib1","SARS-CoV-2","CTGGAAGTTTGGACCT",6,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53C G86T A89V Y121F G155M V181M",6
"lib1","SARS-CoV-2","CTGGAATAAATCCTAC",2,1.3,NA,NA,NA,NA,NA,NA,"stop","L5* Q168D",2
"lib1","SARS-CoV-2","CTGGAATACGTTCTTG",11,59.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y50D Y91P E154S",3
"lib1","SARS-CoV-2","CTGGAATAGATTCAAC",4,13.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80M D90L N107G G166S",4
"lib1","SARS-CoV-2","CTGGAATCTAAACGAT",5,31.91,6,-4.76,1.66,1.5,1.09,0.01,">1 nonsynonymous","N58K G101N S129R",3
"lib1","SARS-CoV-2","CTGGAATTCTCTATTA",8,107.02,6,-4.76,2,1.5,1.24,0.04,"1 nonsynonymous","Y178G",1
"lib1","SARS-CoV-2","CTGGACAACGCATGAA",3,27.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86A N107L S129K G155S Q168T E186V",6
"lib1","SARS-CoV-2","CTGGACACAGAATCAG",16,7.85,NA,NA,NA,NA,NA,NA,"stop","C49S K114* P177E",3
"lib1","SARS-CoV-2","CTGGACAGGAGCACAC",5,46.29,6.34,-4.42,0.74,1.5,1.16,0.04,">1 nonsynonymous","F47C N107Y",2
"lib1","SARS-CoV-2","CTGGACAGTAGGCGTT",5,63.33,10.43,-0.33,0.03,2.84,1.06,0,">1 nonsynonymous","F47V E154N",2
"lib1","SARS-CoV-2","CTGGACATATCGGGCT",2,49.79,10.03,-0.74,0.06,2.69,1.04,0,">1 nonsynonymous","A105V I142V",2
"lib1","SARS-CoV-2","CTGGACATCCGTATCC",3,56.77,8.13,-2.63,0.13,2.29,1.09,0.01,">1 nonsynonymous","D98Q K114T Y175C",3
"lib1","SARS-CoV-2","CTGGACATCTATAGCA",2,13.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14K D98R D137M T201W",4
"lib1","SARS-CoV-2","CTGGACCAGTCCTATT",4,25.76,6.07,-4.7,0.96,1.5,1.23,0.02,">1 nonsynonymous","S19F I104N G196W",3
"lib1","SARS-CoV-2","CTGGACCCCACCAGAA",12,139.88,6,-4.76,2,2.64,1.24,0,">1 nonsynonymous","V65E N107H",2
"lib1","SARS-CoV-2","CTGGACCCTATTCAAG",8,113.56,10.66,-0.1,0.04,2.9,1.06,0,">1 nonsynonymous","S36G S147F",2
"lib1","SARS-CoV-2","CTGGACCGAGCCACTA",2,58.53,6,-4.76,1.96,1.5,1.17,0.01,">1 nonsynonymous","N64Y N120P N151F G155Y Y165D",5
"lib1","SARS-CoV-2","CTGGACCTGTTAATCC",4,11.37,6.07,-4.7,1.22,1.5,1.25,0.04,">1 nonsynonymous","N1D I28A F47Y A81E T140N S200Y",6
"lib1","SARS-CoV-2","CTGGACCTTTGGCCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T S43F P82F S184G",4
"lib1","SARS-CoV-2","CTGGACGAAGCCATTT",7,30.88,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L60C T148R V153M R179G",4
"lib1","SARS-CoV-2","CTGGACGATGAATTAT",7,32.26,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14L D34C N40M G83D D90S",5
"lib1","SARS-CoV-2","CTGGACGGAAATAAAT",1,28.43,9.36,-1.4,0.1,2.85,1.11,0,"1 nonsynonymous","G166C",1
"lib1","SARS-CoV-2","CTGGACGTCATTATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2M S19G Y35D I88*",4
"lib1","SARS-CoV-2","CTGGACTATAAATAGA",4,1.88,NA,NA,NA,NA,NA,NA,"stop","A89* S113L Y175F",3
"lib1","SARS-CoV-2","CTGGACTCTTAGAAAT",1,31.26,6.15,-4.61,0.96,1.5,1.12,0.03,">1 nonsynonymous","W23G F99V S139K",3
"lib1","SARS-CoV-2","CTGGACTGCCGACTGT",8,61.94,6,-4.76,1.4,1.5,1.19,0.01,">1 nonsynonymous","V20R S43L",2
"lib1","SARS-CoV-2","CTGGAGAAAGTACTCT",10,91.81,10.8,0.03,0.06,2.94,1.04,0,">1 nonsynonymous","A18H A190G",2
"lib1","SARS-CoV-2","CTGGAGACAACCTTAG",1,41.34,10.19,-0.58,0.06,2.93,1,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","CTGGAGATAACAAATC",4,39.6,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","L60E S108R P133E",3
"lib1","SARS-CoV-2","CTGGAGCCAATTCAGG",1,10.53,10.41,-0.35,0.35,1.61,1.02,0.05,">1 nonsynonymous","S69N P96G",2
"lib1","SARS-CoV-2","CTGGAGGCAAGAAGTA",1,15.63,10.74,-0.02,0.08,2.89,1.1,0,"1 nonsynonymous","P149G",1
"lib1","SARS-CoV-2","CTGGAGTCAAGAACTA",3,77.2,10.63,-0.13,0.04,2.94,1,0,">1 nonsynonymous","S53I A145V",2
"lib1","SARS-CoV-2","CTGGAGTTAGATTCGA",3,5.93,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N13A I88V K94T C158S",4
"lib1","SARS-CoV-2","CTGGATAAATTCAGTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S45V D137* A192V",3
"lib1","SARS-CoV-2","CTGGATAACCGATCCC",1,22.43,10.18,-0.58,0.07,2.87,1,0,">1 nonsynonymous","T100M N107R",2
"lib1","SARS-CoV-2","CTGGATAACTAATTTG",4,30.33,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","R16V V20S A33L V77S",4
"lib1","SARS-CoV-2","CTGGATAATACCAGAA",3,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y G83Y N107T K132S T201R",5
"lib1","SARS-CoV-2","CTGGATACCCTTCACG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24L K48L G152T",3
"lib1","SARS-CoV-2","CTGGATACCGACGCGG",4,41.63,8.65,-2.12,0.11,2.88,1.1,0.01,">1 nonsynonymous","C61A Y119C",2
"lib1","SARS-CoV-2","CTGGATACGACCTTTA",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R I28T I88L N110M P133A",5
"lib1","SARS-CoV-2","CTGGATACTTATTCCT",4,55.33,9.78,-0.98,0.05,2.71,1.06,0,">1 nonsynonymous","D90E S129P I142L",3
"lib1","SARS-CoV-2","CTGGATAGAAACTTGT",1,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G117T",1
"lib1","SARS-CoV-2","CTGGATAGATACCCAC",2,52.5,10.59,-0.17,0.07,2.89,1.07,0,"1 nonsynonymous","F185L",1
"lib1","SARS-CoV-2","CTGGATATGACACTAG",2,50.24,10.64,-0.12,0.04,2.96,1.03,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","CTGGATATGGGGATGT",1,18.4,9.44,-1.33,0.2,1.78,1.02,0.02,">1 nonsynonymous","Y39V V103M",2
"lib1","SARS-CoV-2","CTGGATATTTTTGCGC",1,9.51,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S45Q A89Y N118S I142Y",4
"lib1","SARS-CoV-2","CTGGATCAAACCGCTA",2,18.35,6,-4.76,0.95,1.5,1.08,0.01,">1 nonsynonymous","D68W K128P",2
"lib1","SARS-CoV-2","CTGGATCACCGACAAT",7,10.18,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","N1I N13W T63I K87N R127N S139G",6
"lib1","SARS-CoV-2","CTGGATCATACCGAGC",5,21.89,10.24,-0.53,0.05,2.91,1.03,0,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","CTGGATCCTCGAAGTC",1,26.11,9.75,-1.02,0.16,2.07,1.09,0.02,"1 nonsynonymous","Y178E",1
"lib1","SARS-CoV-2","CTGGATCCTTAACCCA",1,110.4,10.92,0.16,0.07,2.9,1.04,0,"1 nonsynonymous","Y175W",1
"lib1","SARS-CoV-2","CTGGATGATCACTAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7W S19M Q144L",3
"lib1","SARS-CoV-2","CTGGATGCCAGAACCA",2,9.04,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I2G S19L N107K G174S",4
"lib1","SARS-CoV-2","CTGGATGTTACATCCC",2,6.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N F99R N107I H189Q",4
"lib1","SARS-CoV-2","CTGGATTGGTAACACT",4,34.75,8.74,-2.02,0.11,2.57,1.11,0,">1 nonsynonymous","A89V T170M",2
"lib1","SARS-CoV-2","CTGGCAAAATAATGGA",5,2.39,NA,NA,NA,NA,NA,NA,"stop","E10S L38S A42V Y119*",4
"lib1","SARS-CoV-2","CTGGCAAAGTTTGTTT",8,53.29,6.48,-4.28,0.61,1.5,1.17,0.04,">1 nonsynonymous","G83L P96L S113M",3
"lib1","SARS-CoV-2","CTGGCAAATGACAACG",3,62.8,10.71,-0.06,0.08,2.92,1.04,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","CTGGCAATCTGAATAC",13,88.62,6.09,-4.68,0.77,1.5,1.17,0.02,">1 nonsynonymous","F62E S69L P149T",3
"lib1","SARS-CoV-2","CTGGCAATTACGAAAG",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W V103I S129R V180R",4
"lib1","SARS-CoV-2","CTGGCACAGATGATTT",2,34.64,8.88,-1.88,0.1,2.92,1.06,0,">1 nonsynonymous","I2S N171P",2
"lib1","SARS-CoV-2","CTGGCACGACCCACAC",4,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25N F44I A89V",3
"lib1","SARS-CoV-2","CTGGCATAAACCATCA",2,18.93,10.87,0.11,0.09,2.89,1.02,0,">1 nonsynonymous","K56R K198Y",2
"lib1","SARS-CoV-2","CTGGCCAAACGACACG",3,58.68,10.87,0.1,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGGCCCTAACTTGGA",3,1.13,NA,NA,NA,NA,NA,NA,"stop","Y35A D97* E141D P149K",4
"lib1","SARS-CoV-2","CTGGCCCTCCGCAGTA",1,10.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R I138A",2
"lib1","SARS-CoV-2","CTGGCGACTTTTTACA",2,36.19,10.64,-0.13,0.06,2.85,1.05,0,"1 nonsynonymous","N58A",1
"lib1","SARS-CoV-2","CTGGCGAGTTTGCCAA",1,64,9.65,-1.11,0.09,2.78,1.05,0,"1 nonsynonymous","G174V",1
"lib1","SARS-CoV-2","CTGGCGATGCTAATTA",1,30.54,10.26,-0.51,0.1,2.58,1.06,0.01,">1 nonsynonymous","N4L N64T Y91L",3
"lib1","SARS-CoV-2","CTGGCGGATTTACAGA",3,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V L95T A105L C158M",4
"lib1","SARS-CoV-2","CTGGCGGCTTCTCAGC",2,11.09,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","I72S V115T G146F T201W",4
"lib1","SARS-CoV-2","CTGGCTAAAGGAAAAC",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V F99I G166I",3
"lib1","SARS-CoV-2","CTGGCTACTTGTTGAA",1,65.7,9.65,-1.11,0.07,1.9,1.06,0,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CTGGCTAGCAATTGAA",4,36.58,6.55,-4.21,0.32,1.5,1.13,0.01,">1 nonsynonymous","N40K S41V K48D G83F D98C V173A",6
"lib1","SARS-CoV-2","CTGGCTATTGGCAGCA",2,14.81,10.92,0.15,0.16,2.95,1.01,0.01,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","CTGGCTCTCTCCTCAT",6,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G T46S C49Y K56I V77I F134W",6
"lib1","SARS-CoV-2","CTGGCTGCTGTCAATA",13,236.24,10.77,0,0.05,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGGCTTCCTCAAGTC",4,18.41,10.65,-0.12,0.07,2.85,1.09,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","CTGGCTTGATGAAAAG",8,1.14,NA,NA,NA,NA,NA,NA,"stop","V71* Q84L L122* S129L F160K",5
"lib1","SARS-CoV-2","CTGGCTTTGATTGTTG",7,55.2,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I104E Y119L",2
"lib1","SARS-CoV-2","CTGGGAAACTGTAACT",3,46.37,10.18,-0.58,0.06,2.59,1.04,0,">1 nonsynonymous","A105Y P149R",2
"lib1","SARS-CoV-2","CTGGGAACGACCTCAG",2,11.51,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T46S P82I F99S",3
"lib1","SARS-CoV-2","CTGGGAATAACGCAGT",2,79.83,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39S V77Q S113Y",3
"lib1","SARS-CoV-2","CTGGGAATTCAATCTA",5,81.36,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","L5Y F17D G86Q R136P",4
"lib1","SARS-CoV-2","CTGGGACACATAGGGT",1,19.97,8.97,-1.79,0.12,2.74,1.13,0,">1 nonsynonymous","D98T G117S",2
"lib1","SARS-CoV-2","CTGGGACACCTTAAAA",14,105.79,9.93,-0.83,0.05,2.88,1.01,0,">1 nonsynonymous","T85S A145R",2
"lib1","SARS-CoV-2","CTGGGACCTGTAATTC",2,44.95,9.22,-1.55,0.12,2.14,1.09,0.01,">1 nonsynonymous","F167L T201Q",2
"lib1","SARS-CoV-2","CTGGGACGTAAGAAAT",2,1.14,NA,NA,NA,NA,NA,NA,"stop","I2* Y119F",2
"lib1","SARS-CoV-2","CTGGGAGAACAGTGTG",2,7.24,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y35W K56Q I104D V153L P177M",5
"lib1","SARS-CoV-2","CTGGGAGAATCTATTT",11,174.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E154N Y159T",2
"lib1","SARS-CoV-2","CTGGGATCCCCTTGGA",6,18.02,6,-4.76,2,1.5,1.07,0.04,">1 nonsynonymous","I2R V37A T46Y D98E F99C Y119T",6
"lib1","SARS-CoV-2","CTGGGATTTTAAGCGG",2,56.54,8.55,-2.22,0.24,1.67,1.16,0.02,">1 nonsynonymous","P7S C102F Y119R",3
"lib1","SARS-CoV-2","CTGGGCACTTACACCT",2,8.31,9.39,-1.37,0.29,1.89,1.18,0.04,">1 nonsynonymous","Y123E P149T",2
"lib1","SARS-CoV-2","CTGGGCAGGGAGCAAA",2,14.22,6.09,-4.67,0.72,3,1.1,0.02,">1 nonsynonymous","K56I W106D D112K",3
"lib1","SARS-CoV-2","CTGGGCCACCAAAACA",8,129.17,10.15,-0.62,0.08,2.51,1.01,0,"1 nonsynonymous","D137E",1
"lib1","SARS-CoV-2","CTGGGCCCGCGGTACT",5,1.67,NA,NA,NA,NA,NA,NA,"stop","T15* T63R P177G L183N",4
"lib1","SARS-CoV-2","CTGGGCTATAGGCTTG",3,71.4,10.86,0.09,0.1,2.94,1.02,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","CTGGGCTCAGTTGGTA",2,6.46,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","D34S V103N S129D Y178L",4
"lib1","SARS-CoV-2","CTGGGCTGGGGTAACA",2,68.53,10.9,0.14,0.07,2.93,1.03,0,">1 nonsynonymous","S43L K199V",2
"lib1","SARS-CoV-2","CTGGGCTTAACCCGAT",13,79.39,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F70I D97Y S139T",3
"lib1","SARS-CoV-2","CTGGGGAAAAGAAGCC",9,57.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I2V A22V I88N G152K Y178F",5
"lib1","SARS-CoV-2","CTGGGGAAACCAGACA",4,95.59,9.9,-0.87,0.05,2.89,1.03,0,">1 nonsynonymous","K56S N130H G146T",3
"lib1","SARS-CoV-2","CTGGGGAAAGATGTTT",2,6.76,6,-4.76,1.66,3,1.25,0.02,">1 nonsynonymous","T3A Y93V I142A",3
"lib1","SARS-CoV-2","CTGGGGAAGCCACATA",7,64.75,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","D90R S139P Y178D",3
"lib1","SARS-CoV-2","CTGGGGCAACCGAAAT",2,45.3,10.83,0.06,0.08,2.96,1,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","CTGGGGCATACTTATA",6,155.94,10.88,0.12,0.08,2.83,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGGGGCTTTCGCCCA",2,13.99,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P7L T15H L95W D112Q T148A",5
"lib1","SARS-CoV-2","CTGGGGTACAGAGTGT",1,17.77,9.63,-1.14,0.08,2.81,1.05,0,">1 nonsynonymous","G9A D90C G116S P149E",4
"lib1","SARS-CoV-2","CTGGGGTAGTCGTATT",7,28.6,8.55,-2.22,0.21,1.5,1.01,0.02,">1 nonsynonymous","L5T V77E G174M",3
"lib1","SARS-CoV-2","CTGGGGTATCACTATG",7,57.72,6.09,-4.68,0.8,1.5,1.19,0.01,">1 nonsynonymous","R16K T85P D98R W106C",4
"lib1","SARS-CoV-2","CTGGGGTCCTTTATAT",1,12.91,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","F8T C49P P197Q",3
"lib1","SARS-CoV-2","CTGGGGTTACTATGGT",7,91.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S45Y G101L",2
"lib1","SARS-CoV-2","CTGGGTAAACAATGCA",7,5.48,NA,NA,NA,NA,NA,NA,"stop","L38G E76S G83F Y91* T148W G152I",6
"lib1","SARS-CoV-2","CTGGGTAAACTGTGCA",4,12.27,9.41,-1.36,0.3,1.5,1.03,0.05,">1 nonsynonymous","S43Y L57T E141Y T148Y",4
"lib1","SARS-CoV-2","CTGGGTAACGTATAAG",1,33.09,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D112C L131T I142N K198V",4
"lib1","SARS-CoV-2","CTGGGTACACAAACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S53* T201S",2
"lib1","SARS-CoV-2","CTGGGTATCCATACAT",7,75.12,10.68,-0.08,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGGGTATCTAAAATC",10,164.91,10.78,0.02,0.04,2.91,1.06,0,">1 nonsynonymous","I2T R16K",2
"lib1","SARS-CoV-2","CTGGGTATCTAAGTTG",2,0.81,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib1","SARS-CoV-2","CTGGGTCACAAAACTA",5,38.76,10.82,0.06,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGGGTTCTACAGTGT",5,227.97,9.17,-1.59,0.07,2.81,1.13,0,">1 nonsynonymous","E154A T170L",2
"lib1","SARS-CoV-2","CTGGTAAACTTAAACA",5,41.76,6,-4.76,2,2.5,1.34,0.01,">1 nonsynonymous","C61L V65S F167T",3
"lib1","SARS-CoV-2","CTGGTAACTAACTTAA",1,3.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","H189Y",1
"lib1","SARS-CoV-2","CTGGTAAGAACACAGA",2,17.8,10.11,-0.65,0.12,2.67,1.02,0.01,">1 nonsynonymous","Y21W F99W F134G",3
"lib1","SARS-CoV-2","CTGGTAATCACGACAG",6,85.68,9.25,-1.52,0.14,1.77,1.09,0.01,"1 nonsynonymous","Y50Q",1
"lib1","SARS-CoV-2","CTGGTAATCATCGCAA",1,5.74,6.52,-4.24,2,3,1.18,0.01,">1 nonsynonymous","R27L T55N Q79K A89M",4
"lib1","SARS-CoV-2","CTGGTAATGCACGATT",4,0.44,NA,NA,NA,NA,NA,NA,"stop","A18L S45P N118*",3
"lib1","SARS-CoV-2","CTGGTACCGACACAAC",5,45.07,10.66,-0.1,0.06,2.89,1.03,0,">1 nonsynonymous","A14S T140A",2
"lib1","SARS-CoV-2","CTGGTACTAAACCTTC",3,19.33,10.88,0.12,0.48,1.5,1.05,0.08,">1 nonsynonymous","C49H N110L",2
"lib1","SARS-CoV-2","CTGGTACTTGTGGGCC",8,79.24,9.27,-1.5,0.08,2.76,1.14,0,">1 nonsynonymous","T55K G166W",2
"lib1","SARS-CoV-2","CTGGTAGCCGTGGATG",5,88.85,8.61,-2.16,0.12,2.06,1.12,0.01,">1 nonsynonymous","G83S G146M",2
"lib1","SARS-CoV-2","CTGGTAGTAGCTTATT",1,0.9,NA,NA,NA,NA,NA,NA,"stop","G86M D97* P197K",3
"lib1","SARS-CoV-2","CTGGTATACATAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44* C49* T55R D112I Y121N S129K",6
"lib1","SARS-CoV-2","CTGGTATACTACAAAC",4,0.77,NA,NA,NA,NA,NA,NA,"stop","F8Y F62* Y91E K132V",4
"lib1","SARS-CoV-2","CTGGTATATACGTATT",6,116.27,10.03,-0.74,0.1,2.18,1.06,0,"1 nonsynonymous","R127N",1
"lib1","SARS-CoV-2","CTGGTATCACTCAATG",1,8,6,-4.76,2,3,1.35,0.01,">1 nonsynonymous","G9S S53F D75G A105S G116A S147P G155S",7
"lib1","SARS-CoV-2","CTGGTCAAACCCTCAT",5,40.07,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C6V A14T K48V G86R N92L",5
"lib1","SARS-CoV-2","CTGGTCACCATCCGGT",6,156.34,10.3,-0.46,0.05,2.8,1,0,"1 nonsynonymous","D34H",1
"lib1","SARS-CoV-2","CTGGTCCTTAAAGGAC",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127N T201W",2
"lib1","SARS-CoV-2","CTGGTCCTTCTATGTC",16,198.28,10.4,-0.37,0.04,2.79,1.03,0,">1 nonsynonymous","P54R E186I",2
"lib1","SARS-CoV-2","CTGGTCGGATTTACCC",3,48.99,10.5,-0.27,0.04,2.94,1.01,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","CTGGTCTGAGATTGAT",2,18.18,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","Q84A C102N",2
"lib1","SARS-CoV-2","CTGGTCTTGCAGTGAC",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L I28T V103C T148S",4
"lib1","SARS-CoV-2","CTGGTGAACGCAATTT",2,42.47,10.6,-0.17,0.06,2.91,1,0,">1 nonsynonymous","A42R S69Y",2
"lib1","SARS-CoV-2","CTGGTGCCAAATAAGA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","K128* N157K",2
"lib1","SARS-CoV-2","CTGGTGCCATCATTAC",9,72.26,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L95C L122T F185T",3
"lib1","SARS-CoV-2","CTGGTGTAAGTGAAAA",2,62.4,10.78,0.02,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGGTTAAAGCTTACA",1,90.7,8.45,-2.31,0.11,2.59,1.08,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","CTGGTTAATTTTATGG",5,70.44,8.38,-2.39,0.22,1.6,1.19,0.02,">1 nonsynonymous","N1P D34R N120P P149E L188M",5
"lib1","SARS-CoV-2","CTGGTTATCACTTTCT",1,0.97,NA,NA,NA,NA,NA,NA,"stop","E10C S41T G172*",3
"lib1","SARS-CoV-2","CTGGTTATTGGGAATT",2,28.04,9.92,-0.85,0.08,2.04,1,0,">1 nonsynonymous","A14G N120K E135K T201M",4
"lib1","SARS-CoV-2","CTGGTTCAAAATTCAG",3,122.21,9.14,-1.63,0.09,2.8,1.12,0,">1 nonsynonymous","N64Y G146K",2
"lib1","SARS-CoV-2","CTGGTTCGATACCTAT",5,74.64,8.43,-2.33,0.11,2.49,1.14,0.01,"1 nonsynonymous","S113W",1
"lib1","SARS-CoV-2","CTGGTTCGCTTCTCGC",3,11.4,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P96W S147Y",2
"lib1","SARS-CoV-2","CTGGTTGACAGCAGGC",1,9.4,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2D A42R G83I Q144F G166R",5
"lib1","SARS-CoV-2","CTGGTTGACCTTAAAA",5,25.25,7.07,-3.69,0.49,1.5,1.19,0.04,">1 nonsynonymous","T3W S19N S36M G83T",4
"lib1","SARS-CoV-2","CTGGTTTAAAACATCT",1,21.34,10.65,-0.11,0.11,2.85,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGTAAAAACTTCCAT",4,88.79,10.74,-0.03,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTAAAAATATATGC",4,2.02,NA,NA,NA,NA,NA,NA,"stop","D34V D68* Y121I V173S",4
"lib1","SARS-CoV-2","CTGTAAAAATTTCGAT",2,32.11,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P82T Q176R S200W",3
"lib1","SARS-CoV-2","CTGTAAAACAGATCGC",12,2.52,NA,NA,NA,NA,NA,NA,"stop","A22S G86D E135M I142*",4
"lib1","SARS-CoV-2","CTGTAAAAGCTGCTTT",6,117.89,10.8,0.03,0.08,2.91,1.04,0,"1 nonsynonymous","I28Y",1
"lib1","SARS-CoV-2","CTGTAAAAGGGTGTTT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","K87* G117T",2
"lib1","SARS-CoV-2","CTGTAAAAGTTATGGA",12,123.06,10.61,-0.15,0.06,2.87,1.05,0,">1 nonsynonymous","I88V N110S",2
"lib1","SARS-CoV-2","CTGTAAAATATCACAT",1,1.07,NA,NA,NA,NA,NA,NA,"stop","V37G K87I N118I S139*",4
"lib1","SARS-CoV-2","CTGTAAAATGAAATAG",2,12.96,7.11,-3.66,0.41,1.5,1.13,0.02,">1 nonsynonymous","F62L R78S R127E",3
"lib1","SARS-CoV-2","CTGTAAACTGTGTCAC",5,145.67,10.65,-0.11,0.03,2.95,1.02,0,">1 nonsynonymous","G9D S36M T63Y P197R",4
"lib1","SARS-CoV-2","CTGTAAAGAAACAGGG",12,136.61,8.23,-2.54,0.18,1.51,1.19,0.01,">1 nonsynonymous","P133F L162W",2
"lib1","SARS-CoV-2","CTGTAAAGTAACGGCA",4,8.64,6.56,-4.21,0.4,3,1.04,0,">1 nonsynonymous","F47G D59A D112R",3
"lib1","SARS-CoV-2","CTGTAAATATTTTGCG",2,9.98,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","P82W N157R Y165S",3
"lib1","SARS-CoV-2","CTGTAAATTCCGAAAA",5,1.2,NA,NA,NA,NA,NA,NA,"stop","N1S L57T G146S F167*",4
"lib1","SARS-CoV-2","CTGTAACAAATCGACT",1,14.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89H N107I G146W T170S",4
"lib1","SARS-CoV-2","CTGTAACAATAAATTC",3,18.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50L P82N",2
"lib1","SARS-CoV-2","CTGTAACACGAGCCCA",1,58.69,9.03,-1.73,0.11,2.12,1.09,0.01,">1 nonsynonymous","S41E C61Y N130K Q176R",4
"lib1","SARS-CoV-2","CTGTAACACTGGTGCG",1,21.04,9.43,-1.33,0.16,1.92,1.04,0.01,">1 nonsynonymous","S45C N120H Q144V",3
"lib1","SARS-CoV-2","CTGTAACATTGCATAT",2,33.53,10.86,0.1,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTAACCTAAACTAT",3,57,10.22,-0.55,0.08,2.55,1.04,0,"1 nonsynonymous","D34F",1
"lib1","SARS-CoV-2","CTGTAACCTTCCCTAA",2,8.48,6.55,-4.21,0.57,1.5,1.08,0.06,">1 nonsynonymous","I80A I88L",2
"lib1","SARS-CoV-2","CTGTAACGCTCCGAGG",4,46.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77G N118F I138P G166K",4
"lib1","SARS-CoV-2","CTGTAACTAAACTGTC",7,117.96,10.82,0.05,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGTAAGCGATGCGTA",4,0.95,NA,NA,NA,NA,NA,NA,"stop","L60F K114A N120*",3
"lib1","SARS-CoV-2","CTGTAAGGAGATGATT",5,98.24,10.84,0.07,0.07,2.89,1.08,0,">1 nonsynonymous","V37A K56T T201Q",3
"lib1","SARS-CoV-2","CTGTAAGGCTGTGTAA",8,28.77,6,-4.76,0.9,1.5,1.09,0.01,">1 nonsynonymous","K56N G101D P161T",3
"lib1","SARS-CoV-2","CTGTAATATTTCACTT",8,88.98,10.26,-0.5,0.08,2.69,1.02,0,">1 nonsynonymous","Y39V G83L T140P",3
"lib1","SARS-CoV-2","CTGTAATCAAGCCTTT",5,19.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D97Y V103H G116S L162M",4
"lib1","SARS-CoV-2","CTGTAATCTAATGCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41D D68* F167C",3
"lib1","SARS-CoV-2","CTGTAATGCAATATAG",6,54.47,6.03,-4.73,0.78,1.5,1.14,0.01,">1 nonsynonymous","T46I G83F D112N G152F P197N",5
"lib1","SARS-CoV-2","CTGTAATGCGCAATGA",5,26.26,10.31,-0.45,0.07,2.91,1.01,0,">1 nonsynonymous","N40Y L60T",2
"lib1","SARS-CoV-2","CTGTAATTAACATCAG",2,1.05,NA,NA,NA,NA,NA,NA,"stop","V37W K48* K94V A105I",4
"lib1","SARS-CoV-2","CTGTACAAAGAATCGG",6,1.77,NA,NA,NA,NA,NA,NA,"stop","I142* R179W",2
"lib1","SARS-CoV-2","CTGTACAAAGCTACCC",3,15.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107Y G146R",2
"lib1","SARS-CoV-2","CTGTACAAGACCCAAG",4,74.14,10.75,-0.01,0.08,2.86,1.09,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","CTGTACAATTACACAG",2,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R A89R Y121I R127L",4
"lib1","SARS-CoV-2","CTGTACAATTACGTAG",8,2.14,NA,NA,NA,NA,NA,NA,"stop","D34N W106V Y123L G152*",4
"lib1","SARS-CoV-2","CTGTACAATTTTCTCC",6,45.31,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N30C T85I D98L C102R Y121F K128I",6
"lib1","SARS-CoV-2","CTGTACACATGCGAGA",9,125.3,10.76,0,0.07,2.92,1.06,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","CTGTACACCTTAAATA",11,138.05,10.74,-0.02,0.07,2.87,1.07,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","CTGTACAGGGTAGATA",1,16.74,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F44R L95Y D98E P161Q",4
"lib1","SARS-CoV-2","CTGTACCACTTATGTA",2,72.78,6,-4.76,2,3,1.21,0,">1 nonsynonymous","Y21G K48G",2
"lib1","SARS-CoV-2","CTGTACCGGTCATATT",7,86.66,10,-0.76,0.09,2.48,1.03,0,">1 nonsynonymous","A14T S129H F134L",3
"lib1","SARS-CoV-2","CTGTACCTAGAGGTGC",10,140.62,10.69,-0.07,0.03,2.94,1,0,">1 nonsynonymous","I2V A14S",2
"lib1","SARS-CoV-2","CTGTACCTCAAATGAG",4,5.43,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N1F L5P F17M A33Y D90S N130D E141F N151Y",8
"lib1","SARS-CoV-2","CTGTACGAAGTAGGTA",1,122.72,7.46,-3.3,0.14,1.91,1.16,0,"1 nonsynonymous","C158T",1
"lib1","SARS-CoV-2","CTGTACGCAACACCCC",1,46.3,10.65,-0.11,0.06,2.81,1.14,0,">1 nonsynonymous","L5N T148V",2
"lib1","SARS-CoV-2","CTGTACGTTCTGATCG",5,51.06,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","T3H S41Y T46A D59V T100I R124L N157F",7
"lib1","SARS-CoV-2","CTGTACTCATCATGGA",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A D59S I72P N107V",4
"lib1","SARS-CoV-2","CTGTACTGCATATTTT",19,17.17,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","CTGTACTTACAAGACC",1,9.96,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","D68P",1
"lib1","SARS-CoV-2","CTGTACTTGCATAAAA",7,109.52,10.12,-0.64,0.07,2.43,1.05,0,">1 nonsynonymous","Y21W Y91N",2
"lib1","SARS-CoV-2","CTGTACTTGTATTTGA",7,66.74,9.69,-1.07,0.13,1.81,1.14,0.01,"1 nonsynonymous","R136D",1
"lib1","SARS-CoV-2","CTGTACTTTACTTCCG",13,386.32,10.81,0.04,0.05,2.93,1.04,0,">1 nonsynonymous","N24K Q84S",2
"lib1","SARS-CoV-2","CTGTAGAGATAGCTTA",6,94.56,10.71,-0.05,0.07,2.91,1.05,0,"1 nonsynonymous","I28M",1
"lib1","SARS-CoV-2","CTGTAGATGAATTTGC",1,1.18,NA,NA,NA,NA,NA,NA,"stop","C6Q N30* V37W F70P R127S",5
"lib1","SARS-CoV-2","CTGTAGTAAAAGTATC",4,109.1,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K114L L131D Y143G T148H V173A K199G",6
"lib1","SARS-CoV-2","CTGTAGTATAATCCAT",7,0.32,NA,NA,NA,NA,NA,NA,"stop","I2N G83C G101Q N118* K132M I138C",6
"lib1","SARS-CoV-2","CTGTATAAATCCGTCA",5,22.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29P C102L P149T",3
"lib1","SARS-CoV-2","CTGTATAAGAGTGAAC",1,5.5,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G9C G83V T140H Y178C",4
"lib1","SARS-CoV-2","CTGTATAATATGGTTC",2,41.96,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D59F F167V",2
"lib1","SARS-CoV-2","CTGTATACACTATATA",4,156.81,9.84,-0.92,0.09,2,1.04,0,">1 nonsynonymous","Y35D A105T",2
"lib1","SARS-CoV-2","CTGTATACATATGTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59* F99S Y121D",3
"lib1","SARS-CoV-2","CTGTATATAAGAATCA",6,54.08,7.18,-3.59,0.27,1.5,1.17,0.02,"1 nonsynonymous","F99A",1
"lib1","SARS-CoV-2","CTGTATGCAACAGTTT",2,19.88,10.31,-0.46,0.09,2.71,1.02,0,">1 nonsynonymous","R27A E186L",2
"lib1","SARS-CoV-2","CTGTATGCGACCCACA",7,27.58,6,-4.76,0.65,1.5,1.1,0,">1 nonsynonymous","F70C C158D",2
"lib1","SARS-CoV-2","CTGTATGTTGTGTTCC",1,13.31,10.36,-0.41,0.12,2.93,1.06,0.02,">1 nonsynonymous","L38F P149M",2
"lib1","SARS-CoV-2","CTGTATTAACACTAAA",1,31.1,9.96,-0.8,0.1,2.65,1.04,0.01,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","CTGTATTATATGATAT",1,14.04,9.86,-0.9,0.17,2.49,1,0.02,">1 nonsynonymous","A42G Q168S",2
"lib1","SARS-CoV-2","CTGTATTATCTCTTTG",3,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N N92W V103N K128D V182E",5
"lib1","SARS-CoV-2","CTGTATTGCTCCTAAA",15,134.48,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T46S Y91D D97T G155C L162Y",5
"lib1","SARS-CoV-2","CTGTATTGGACAAACC",1,10.58,7.4,-3.36,0.65,1.5,1,0.08,">1 nonsynonymous","K26L F99S W106C G155T",4
"lib1","SARS-CoV-2","CTGTATTGGGCACTCG",1,12.96,6.9,-3.86,0.54,1.5,1.12,0.04,">1 nonsynonymous","T55F F70L D90F",3
"lib1","SARS-CoV-2","CTGTCAAAATATTGAA",3,22.83,6,-4.76,2,1.5,1.38,0.05,">1 nonsynonymous","N58H A105W E135G N171G",4
"lib1","SARS-CoV-2","CTGTCAAATACGTTAC",6,5.91,NA,NA,NA,NA,NA,NA,"stop","G9P S19L Q144L L188*",4
"lib1","SARS-CoV-2","CTGTCAAATCCTAGGT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108G T140E F167R",3
"lib1","SARS-CoV-2","CTGTCAATCAGCGACC",3,43.26,9.6,-1.17,0.05,2.84,1.06,0,">1 nonsynonymous","Y121L Q168T P191H",3
"lib1","SARS-CoV-2","CTGTCAATTACGACAA",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N K56G N64R W106R Y119V",5
"lib1","SARS-CoV-2","CTGTCACAAAAGACTA",2,39.66,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C49R Y91T N110H S139L T201N",5
"lib1","SARS-CoV-2","CTGTCACAAACCGCTA",3,74.47,10.78,0.02,0.09,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTCACAAGAATTAA",11,76.57,6,-4.76,0.57,1.5,1.11,0,">1 nonsynonymous","T85A F99S I142M G166I",4
"lib1","SARS-CoV-2","CTGTCACACACATTAG",4,1.26,NA,NA,NA,NA,NA,NA,"stop","I2Y R27* E141C",3
"lib1","SARS-CoV-2","CTGTCACCCTACTTGA",12,11.27,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13S D68R N151A F160S",4
"lib1","SARS-CoV-2","CTGTCACCGTGTTACC",5,39.26,10.19,-0.57,0.07,2.73,1.04,0,"1 nonsynonymous","D34H",1
"lib1","SARS-CoV-2","CTGTCACGACTTTGGA",2,97.94,10.23,-0.53,0.03,2.82,1.02,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","CTGTCACGAGACAAAC",3,6.2,9.96,-0.81,0.45,1.95,1,0.07,">1 nonsynonymous","A33I Y91T",2
"lib1","SARS-CoV-2","CTGTCACGGTTTTACT",4,32.8,8.63,-2.14,0.3,1.5,1.03,0.04,">1 nonsynonymous","L38S A105Y V115T G152N Q168H",5
"lib1","SARS-CoV-2","CTGTCACTCTGCAACC",5,93.32,9.93,-0.84,0.11,2.15,1.09,0.01,">1 nonsynonymous","V173D V180A",2
"lib1","SARS-CoV-2","CTGTCAGAATGCGTCT",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S E76N S129C S147T Y175I T201L",6
"lib1","SARS-CoV-2","CTGTCAGAGCGAATAC",2,63.84,8.21,-2.56,0.21,1.98,1.13,0.02,">1 nonsynonymous","F160I Q176S",2
"lib1","SARS-CoV-2","CTGTCATATTGAACTA",3,43.75,9.39,-1.38,0.21,1.5,1.05,0.02,">1 nonsynonymous","N30M L38K",2
"lib1","SARS-CoV-2","CTGTCATCTTCTCCCA",4,51.83,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A89I N107I I142Y",3
"lib1","SARS-CoV-2","CTGTCATGACTAAAAC",5,45.75,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V37I A42D G51K C158Y",4
"lib1","SARS-CoV-2","CTGTCATGCATTCCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V C102R L122K",3
"lib1","SARS-CoV-2","CTGTCATGCTACCTTC",4,37.01,10.83,0.06,0.1,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTCCAAAAGCGGAA",1,11.03,10.73,-0.04,0.16,2.93,1.05,0.01,">1 nonsynonymous","L5G D59E S200K",3
"lib1","SARS-CoV-2","CTGTCCAGTACTACTG",1,9.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N K198E",2
"lib1","SARS-CoV-2","CTGTCCCAAAAGACTA",3,23.94,6.71,-4.05,0.63,1.5,1.13,0.07,">1 nonsynonymous","L95P G152I L162M G196A",4
"lib1","SARS-CoV-2","CTGTCCCCCAAATTAA",1,13.72,6.77,-3.99,0.51,1.5,1.17,0.07,">1 nonsynonymous","G9I N13S S45L Q84K G116V",5
"lib1","SARS-CoV-2","CTGTCCCCTTTGCACT",2,55.38,10.52,-0.24,0.05,2.96,1.01,0,">1 nonsynonymous","G9T C195Y",2
"lib1","SARS-CoV-2","CTGTCCCGGACCGAAC",8,0.9,NA,NA,NA,NA,NA,NA,"stop","I2D V37* D98L C102W R136F C150M",6
"lib1","SARS-CoV-2","CTGTCCCTATAATTCG",1,16.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D34Y G101V S113P L125T F167Y",5
"lib1","SARS-CoV-2","CTGTCCGTCCCAATAA",2,24.78,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N1K I28A Q84N A105D T140V",5
"lib1","SARS-CoV-2","CTGTCCGTTAGACTCT",3,24.3,7.86,-2.9,0.3,1.64,1.22,0.02,">1 nonsynonymous","P82C F134G",2
"lib1","SARS-CoV-2","CTGTCCTATTAAAACA",17,264.67,9.01,-1.76,0.06,2.87,1.08,0,">1 nonsynonymous","K87M G166V",2
"lib1","SARS-CoV-2","CTGTCGCCTAACATAA",2,45.75,10.75,-0.01,0.06,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTCGCCTGGCCGAA",8,86.63,10.82,0.05,0.07,2.93,1.03,0,"1 nonsynonymous","L5D",1
"lib1","SARS-CoV-2","CTGTCGGAATGTTATT",6,124.48,10.75,-0.02,0.05,2.91,1.07,0,">1 nonsynonymous","L5P T140N",2
"lib1","SARS-CoV-2","CTGTCGGCTTCGCATG",4,58.8,9.27,-1.49,0.08,2.87,1.09,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","CTGTCGGGAAAAGAAC",8,91.67,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38R P96F",2
"lib1","SARS-CoV-2","CTGTCGTATACGCTCA",5,100.07,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F44N G86F",2
"lib1","SARS-CoV-2","CTGTCTACGAACGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib1","SARS-CoV-2","CTGTCTAGTTAATTGC",6,39.05,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28S V37R A89F P96L",4
"lib1","SARS-CoV-2","CTGTCTATACTACTGT",10,87.12,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","F167P G174P",2
"lib1","SARS-CoV-2","CTGTCTGACCAATAGC",3,8.3,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","E10D R73V Y91G P133S P197V",5
"lib1","SARS-CoV-2","CTGTCTGAGCACAATA",1,16.24,9.96,-0.8,0.08,2.72,1.04,0,">1 nonsynonymous","S41R L57T",2
"lib1","SARS-CoV-2","CTGTCTGCAAAATAGA",7,44.52,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","T15V K56T A67V N120G F134W L162R",6
"lib1","SARS-CoV-2","CTGTCTGCCACTTTAA",2,19.51,10.41,-0.35,0.08,2.8,1.01,0,">1 nonsynonymous","P161S V173K",2
"lib1","SARS-CoV-2","CTGTCTGCCCTCCCCA",4,13.15,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","C49S L60P N92R F160R",4
"lib1","SARS-CoV-2","CTGTCTGGCAGACCAA",1,33.96,9.45,-1.31,0.11,2.82,1.1,0,">1 nonsynonymous","T100F E154F",2
"lib1","SARS-CoV-2","CTGTCTTCGATCTTTG",6,0,NA,NA,NA,NA,NA,NA,"stop","K56S N151*",2
"lib1","SARS-CoV-2","CTGTCTTGAAAGCCGG",6,49.01,10.55,-0.21,0.05,2.91,1.02,0,"1 nonsynonymous","D90E",1
"lib1","SARS-CoV-2","CTGTGAAAAACATTAA",3,45.44,10.47,-0.3,0.06,2.88,1,0,"1 nonsynonymous","D34S",1
"lib1","SARS-CoV-2","CTGTGAAAGGATATAA",7,2.47,NA,NA,NA,NA,NA,NA,"stop","Y35* N64R",2
"lib1","SARS-CoV-2","CTGTGAAAGGTCTATG",5,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102P D112F Y119F",3
"lib1","SARS-CoV-2","CTGTGAACGGAACTCC",1,5.89,10.34,-0.42,0.14,2.71,1.23,0.01,"1 nonsynonymous","T63W",1
"lib1","SARS-CoV-2","CTGTGAACTAAAGTTA",7,139.01,10.8,0.03,0.07,2.94,1.02,0,"1 nonsynonymous","N120K",1
"lib1","SARS-CoV-2","CTGTGAAGTACTGGGG",16,167.93,9.13,-1.64,0.05,2.88,1.07,0,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","CTGTGAATTGACAAGA",5,199.66,10.65,-0.11,0.03,2.91,1.03,0,">1 nonsynonymous","R27P F160R",2
"lib1","SARS-CoV-2","CTGTGACGGGCTACTA",3,1.14,NA,NA,NA,NA,NA,NA,"stop","Y35* I104M Y119Q I142C K199N",5
"lib1","SARS-CoV-2","CTGTGACTAGGTACGG",11,213.25,10.14,-0.63,0.05,2.7,1.03,0,"1 nonsynonymous","Y21S",1
"lib1","SARS-CoV-2","CTGTGAGAGTAGAATT",3,102.5,10.82,0.05,0.06,2.87,1.06,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","CTGTGATGATCTGGAT",4,19.67,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S19Q V37W G86M D90L",4
"lib1","SARS-CoV-2","CTGTGCACCACATTTA",6,69.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S Q176N",2
"lib1","SARS-CoV-2","CTGTGCCTGCGACTAA",1,54.89,10.05,-0.72,0.09,2.54,1,0,">1 nonsynonymous","Y35G N64M K128Q T201S",4
"lib1","SARS-CoV-2","CTGTGCGCGAAACGGT",3,48.2,9.49,-1.27,0.11,1.78,1.11,0.01,">1 nonsynonymous","F44L Y91A",2
"lib1","SARS-CoV-2","CTGTGCTATATACTCG",1,7.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K48W T63Y I88A G174K",4
"lib1","SARS-CoV-2","CTGTGGATGAGTCTTG",8,114.44,6.11,-4.66,0.68,1.5,1.2,0.01,">1 nonsynonymous","Y39F A89R Q144I",3
"lib1","SARS-CoV-2","CTGTGGCTAAACAACA",3,35.01,6,-4.76,1.84,1.5,1.16,0.01,">1 nonsynonymous","I2Y R78S D98Y C150N V182T",5
"lib1","SARS-CoV-2","CTGTGGCTTAACTTAA",10,2.43,NA,NA,NA,NA,NA,NA,"stop","K26P K87* C102D",3
"lib1","SARS-CoV-2","CTGTGGTAGTTAAATA",6,28.33,6.08,-4.69,0.96,1.5,1.21,0.02,">1 nonsynonymous","P7M C49D F62W G86V S184T",5
"lib1","SARS-CoV-2","CTGTGTCCAAACCCAA",6,127.92,9.41,-1.35,0.13,1.84,1.12,0.01,">1 nonsynonymous","C6L T100S",2
"lib1","SARS-CoV-2","CTGTGTGTCAAATCCG",1,10.4,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","C49L Y119P F134S",3
"lib1","SARS-CoV-2","CTGTGTTAACAAAGCA",2,26.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D90P Y121G",2
"lib1","SARS-CoV-2","CTGTGTTAACATTCCT",5,28.87,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A14E S43I A67L I104C G174S L183H",6
"lib1","SARS-CoV-2","CTGTGTTTACATTCTC",12,91.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M F44L G83C K94R V153C",5
"lib1","SARS-CoV-2","CTGTTAAAAACAAATA",7,121.1,10.81,0.04,0.09,2.8,1.1,0,"1 nonsynonymous","K198S",1
"lib1","SARS-CoV-2","CTGTTAAACCCAAAAC",6,57.57,8.34,-2.43,0.29,1.54,1.14,0.03,">1 nonsynonymous","D112F T201V",2
"lib1","SARS-CoV-2","CTGTTAAACTTATAAT",4,29.09,6.29,-4.47,1.19,1.5,1.17,0.05,">1 nonsynonymous","C31M N58T I88T R136D",4
"lib1","SARS-CoV-2","CTGTTAAATAATTTAT",8,82.52,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F44R L60V N118Y R179P",4
"lib1","SARS-CoV-2","CTGTTAAATGAACAAG",5,33.45,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6N W106R S113M Q144R",4
"lib1","SARS-CoV-2","CTGTTAAATTGGGTTC",8,39.97,6,-4.76,1.39,1.5,1.18,0.02,">1 nonsynonymous","N58M D68R S129V C158V",4
"lib1","SARS-CoV-2","CTGTTAACCATATTAT",7,43.44,10.68,-0.09,0.06,2.99,1,0,">1 nonsynonymous","E10S N151K",2
"lib1","SARS-CoV-2","CTGTTAAGAGTCAATT",3,57.4,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","E10A N30L L95W L122E S147N",5
"lib1","SARS-CoV-2","CTGTTAAGTTACGCGG",5,37.89,10.15,-0.61,0.09,2.69,1.02,0,">1 nonsynonymous","W106V P197A",2
"lib1","SARS-CoV-2","CTGTTAATGCTTCTTA",9,135.3,10.46,-0.3,0.05,2.84,1.01,0,">1 nonsynonymous","I2P N13T Q84M",3
"lib1","SARS-CoV-2","CTGTTACACACACAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","G9* K56Y N58T Y93G G117D T170L H189C",7
"lib1","SARS-CoV-2","CTGTTACACTGTTGCA",2,41.58,9.94,-0.83,0.12,1.95,1.07,0,">1 nonsynonymous","C49L L122S I138C",3
"lib1","SARS-CoV-2","CTGTTACATTAGGCGT",4,2.18,NA,NA,NA,NA,NA,NA,"stop","I2K F8* S41D K94F G146V",5
"lib1","SARS-CoV-2","CTGTTACGCCCATATT",5,20.67,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G9R S19K C31V F44T R73T T100L E141L",7
"lib1","SARS-CoV-2","CTGTTAGTCTCTGACG",5,108.68,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S45L S113Y L122T P177F",4
"lib1","SARS-CoV-2","CTGTTAGTTGTCACCT",1,11.87,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V32W S41R Y91L L131S",4
"lib1","SARS-CoV-2","CTGTTATAACATAAAG",4,22.4,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I28D N40Y L60E F99Y",4
"lib1","SARS-CoV-2","CTGTTATACGCAACAG",3,27.98,8.59,-2.17,0.11,2.89,1.06,0.01,">1 nonsynonymous","L125M T170V",2
"lib1","SARS-CoV-2","CTGTTATAGACTAGCC",1,5.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G196Y",1
"lib1","SARS-CoV-2","CTGTTATAGCTCAGTG",5,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L F126I T201S",3
"lib1","SARS-CoV-2","CTGTTATATCCAGTCA",1,51.49,10.75,-0.01,0.06,2.93,1.06,0,">1 nonsynonymous","P149S G152N",2
"lib1","SARS-CoV-2","CTGTTATCATAAAATA",2,37.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K26N R124S",2
"lib1","SARS-CoV-2","CTGTTATCTAATTATG",3,65,10.59,-0.17,0.04,2.92,1.02,0,">1 nonsynonymous","T100Y I104Y G146A",3
"lib1","SARS-CoV-2","CTGTTATCTTCAAGAC",3,62.92,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36H T63P R127N S200F",4
"lib1","SARS-CoV-2","CTGTTATTAAATACAA",1,12.22,6,-4.76,2,1.5,1.05,0.02,">1 nonsynonymous","S69R G83S R136T",3
"lib1","SARS-CoV-2","CTGTTATTAGAAACCA",6,79.53,10.78,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTTCAACCCGAAAT",3,0.75,NA,NA,NA,NA,NA,NA,"stop","L60Q F99L T170*",3
"lib1","SARS-CoV-2","CTGTTCACGTTTAACC",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Q N107I",2
"lib1","SARS-CoV-2","CTGTTCAGACGAGTGG",3,98,6,-4.76,1.65,1.5,1.2,0.02,">1 nonsynonymous","F44V Y91L Y143N T148R",4
"lib1","SARS-CoV-2","CTGTTCAGCGTTGAAC",6,102,10.65,-0.11,0.06,2.87,1.08,0,"1 nonsynonymous","P191H",1
"lib1","SARS-CoV-2","CTGTTCCATAAGTATT",1,92.39,9.86,-0.9,0.06,2.7,1.04,0,">1 nonsynonymous","D98F G155E",2
"lib1","SARS-CoV-2","CTGTTCCCGACAAAAA",4,15.45,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44D W106L E135V L187F",4
"lib1","SARS-CoV-2","CTGTTCCTATCTTTTT",5,34.8,10.05,-0.71,0.15,2.31,1,0.01,">1 nonsynonymous","N1S S41G D90S A190Y",4
"lib1","SARS-CoV-2","CTGTTCCTTCACTTGC",5,71.08,10.46,-0.31,0.03,2.97,1.02,0,">1 nonsynonymous","K87A D97R",2
"lib1","SARS-CoV-2","CTGTTCCTTCATCAGC",4,54.24,8.1,-2.66,0.24,1.8,1.22,0.02,">1 nonsynonymous","R27S G146P",2
"lib1","SARS-CoV-2","CTGTTCGGGCAAATCA",2,24.39,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","N58T I72S Y91V",3
"lib1","SARS-CoV-2","CTGTTCGTACGATGAT",1,47.13,10.71,-0.06,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTGTTCTAAATCTTCC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","CTGTTCTCGCCTTTAT",1,6.74,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","I28P D98S A105M V180D",4
"lib1","SARS-CoV-2","CTGTTCTGGTACTTAT",6,155.69,8.64,-2.13,0.13,2.1,1.12,0.01,">1 nonsynonymous","K26R T55A G74L",3
"lib1","SARS-CoV-2","CTGTTGAACACTTTTA",5,4.65,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CTGTTGAAGACTACAT",8,0.54,NA,NA,NA,NA,NA,NA,"stop","A42D S113* Y119D",3
"lib1","SARS-CoV-2","CTGTTGACTATTAGAA",5,60.65,10.42,-0.34,0.08,2.82,1,0,">1 nonsynonymous","F44Y T100H E135K A190G",4
"lib1","SARS-CoV-2","CTGTTGCAGGTGCAAA",3,40.46,9.95,-0.81,0.1,2.11,1.1,0,"1 nonsynonymous","F47N",1
"lib1","SARS-CoV-2","CTGTTGCAGTGCTTCG",3,15.74,9.21,-1.56,0.23,1.58,1.1,0.02,">1 nonsynonymous","V77Q R136H",2
"lib1","SARS-CoV-2","CTGTTGCCCAAGTAAG",2,27.99,9.62,-1.14,0.24,2.39,1.26,0.02,">1 nonsynonymous","C6W R27S K128S",3
"lib1","SARS-CoV-2","CTGTTGCCCCGAATCT",1,77.96,10.83,0.07,0.07,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CTGTTGCCGGCTATGG",3,93.11,6,-4.76,2,3,1.18,0,">1 nonsynonymous","A14Y Y39S F62Y Y93V",4
"lib1","SARS-CoV-2","CTGTTGGAACATTTAC",9,1.39,NA,NA,NA,NA,NA,NA,"stop","A42* G83L S139I G146W",4
"lib1","SARS-CoV-2","CTGTTGGACACCATAA",6,65.96,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S19W S36R A42V F62C P149S",5
"lib1","SARS-CoV-2","CTGTTGGCGTAAAATA",4,36.36,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","C6E D98Y I138G",3
"lib1","SARS-CoV-2","CTGTTGTAGAGTTAGG",2,66.67,9.12,-1.64,0.12,1.83,1.11,0.01,">1 nonsynonymous","G51V V71I K87V V173F G196C",5
"lib1","SARS-CoV-2","CTGTTTAACACTATGC",5,72.67,10.14,-0.63,0.09,2.66,1.07,0,">1 nonsynonymous","W106Y T140R",2
"lib1","SARS-CoV-2","CTGTTTACAAAGATAG",6,85.33,10.44,-0.33,0.07,2.91,1,0,">1 nonsynonymous","G9A N58D G116P E141V",4
"lib1","SARS-CoV-2","CTGTTTACAAGTAAAA",9,32.96,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45T C49E G101M G174V",4
"lib1","SARS-CoV-2","CTGTTTACAGAATGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","C6T V37I A81T I104R Y143D V173*",6
"lib1","SARS-CoV-2","CTGTTTACCAGCAAGC",1,5.38,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","K94M P96S G101L E141R Y175K",5
"lib1","SARS-CoV-2","CTGTTTATAGGCTCAA",1,18.91,10.67,-0.09,0.08,2.95,1,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","CTGTTTCTCTAGATAG",2,63.93,10.05,-0.71,0.07,2.84,1.03,0,"1 nonsynonymous","C6A",1
"lib1","SARS-CoV-2","CTGTTTGCAATAGTTG",6,41.78,6.95,-3.81,0.39,1.66,1.26,0.02,">1 nonsynonymous","G86W T148Q",2
"lib1","SARS-CoV-2","CTGTTTGTACTTAATG",7,61.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T3C T46L D112K Y178P S184A",5
"lib1","SARS-CoV-2","CTGTTTTACTGCACCA",2,106.03,10.64,-0.13,0.06,2.86,1.09,0,">1 nonsynonymous","N40H L60H",2
"lib1","SARS-CoV-2","CTGTTTTATCAGCTCA",3,51.38,8.42,-2.35,0.15,2.5,1.15,0.01,">1 nonsynonymous","S113R E154V A192E T201P",4
"lib1","SARS-CoV-2","CTGTTTTGAACTATTA",1,7,10.69,-0.08,0.21,2.83,1.02,0.01,">1 nonsynonymous","R27F C31F Q163A",3
"lib1","SARS-CoV-2","CTGTTTTTCTTTAGAC",2,5.47,7.22,-3.54,0.31,1.5,1.01,0.01,">1 nonsynonymous","R25S G146Y",2
"lib1","SARS-CoV-2","CTTAAAAAAACCGATC",3,13,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","V20G V52I A81F T100W F156C A190D",6
"lib1","SARS-CoV-2","CTTAAAAAACATATAT",6,2.32,NA,NA,NA,NA,NA,NA,"stop","A33* F99L",2
"lib1","SARS-CoV-2","CTTAAAAAACTCGTAT",1,15.12,10.66,-0.1,0.05,2.91,1.08,0,">1 nonsynonymous","N4R G9L K26R",3
"lib1","SARS-CoV-2","CTTAAAAAAGTAACTG",3,57.81,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F126I K132N Y165I",3
"lib1","SARS-CoV-2","CTTAAAAAATGTTGCT",7,10.31,10.38,-0.38,0.16,2.61,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTTAAAAACCAGAAAT",7,70.46,10.1,-0.66,0.08,2.55,1.02,0,">1 nonsynonymous","W106K K199Y",2
"lib1","SARS-CoV-2","CTTAAAAACGCGTGAT",2,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G C49W",2
"lib1","SARS-CoV-2","CTTAAAAACTGTGATT",3,33.3,9.48,-1.29,0.11,2.71,1.13,0.01,">1 nonsynonymous","S45G K114G",2
"lib1","SARS-CoV-2","CTTAAAAAGACTAACC",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V181R S200N",2
"lib1","SARS-CoV-2","CTTAAAAATATGGAAC",11,194.62,10.77,0.01,0.05,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTAAAAATTACCAAA",4,94.94,10.3,-0.47,0.04,2.92,1.03,0,"1 nonsynonymous","E154H",1
"lib1","SARS-CoV-2","CTTAAAACAAGAACAT",8,79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G83R D90A L162A",3
"lib1","SARS-CoV-2","CTTAAAACTATTTCAG",1,48.72,9.5,-1.27,0.07,2.95,1.02,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","CTTAAAAGGTAGGCCG",2,46.12,7.85,-2.92,0.22,1.74,1.17,0.02,">1 nonsynonymous","C31I A81K K114E",3
"lib1","SARS-CoV-2","CTTAAAATAAGCTACA",6,49.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y F167T",2
"lib1","SARS-CoV-2","CTTAAAATACACATTT",2,5.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N E186V",2
"lib1","SARS-CoV-2","CTTAAAATACTACTGA",4,73.27,9.93,-0.84,0.08,2.33,1.04,0,">1 nonsynonymous","V52K T201K",2
"lib1","SARS-CoV-2","CTTAAAATAGGTCCCC",3,28.98,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A14K N58T F70V E186D T201M",5
"lib1","SARS-CoV-2","CTTAAAATAGTAATAT",8,1.23,NA,NA,NA,NA,NA,NA,"stop","T46L P54L K87* Y119H P149K A190P",6
"lib1","SARS-CoV-2","CTTAAAATATAACAGA",6,15.93,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","A14R S45D N58S N64D P96L",5
"lib1","SARS-CoV-2","CTTAAAATCCGGACAG",5,34.5,6,-4.76,1.67,3,1.13,0,">1 nonsynonymous","S36E T55I T85K D97R F167I L188M",6
"lib1","SARS-CoV-2","CTTAAAATCGCTTTCA",7,101.61,9.86,-0.91,0.07,2.65,1.09,0,">1 nonsynonymous","G9A Y39S S45L V153S",4
"lib1","SARS-CoV-2","CTTAAAATGTTAGCTG",2,204.8,10.11,-0.66,0.09,2.37,1.03,0,">1 nonsynonymous","Y50H G83Y T201A",3
"lib1","SARS-CoV-2","CTTAAACAATACAGAA",3,61.66,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C102T Y121V I138A",3
"lib1","SARS-CoV-2","CTTAAACAATTAAAAC",4,8.66,7.93,-2.84,0.31,1.58,1.11,0.05,"1 nonsynonymous","Q176F",1
"lib1","SARS-CoV-2","CTTAAACACGCGCTTA",4,50.94,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y21C F62S P133L E154H",4
"lib1","SARS-CoV-2","CTTAAACACTTGGAGT",9,94.26,10.02,-0.74,0.04,2.01,1.04,0,">1 nonsynonymous","C61E I104Y W106R",3
"lib1","SARS-CoV-2","CTTAAACAGGTTAAAC",3,16.6,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","N1L C49L G117L",3
"lib1","SARS-CoV-2","CTTAAACAGGTTATCA",7,161.91,10.16,-0.61,0.05,2.87,1.03,0,">1 nonsynonymous","K87G F99W E154R",3
"lib1","SARS-CoV-2","CTTAAACCACAACATT",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S G117S P133A",3
"lib1","SARS-CoV-2","CTTAAACCCAAAGGGT",3,0,NA,NA,NA,NA,NA,NA,"stop","V20L N30*",2
"lib1","SARS-CoV-2","CTTAAACGAGAACAAT",3,18.85,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","T15C F47W G51C G86N P96T",5
"lib1","SARS-CoV-2","CTTAAACGCGCATTAA",7,96.11,9.97,-0.79,0.05,2.08,1.01,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","CTTAAACGTACAGTTA",1,22.28,10.83,0.06,0.13,2.9,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTAAACGTATATTAC",1,52.29,10.37,-0.39,0.04,2.96,1,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","CTTAAACGTCCTTACG",2,29.87,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L5I F8G Y93N",3
"lib1","SARS-CoV-2","CTTAAACGTTTTAATT",5,30.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5I Y143K P149H F167K K198Q",5
"lib1","SARS-CoV-2","CTTAAACTAGCCGCAG",1,16.74,10.37,-0.4,0.1,2.84,1.1,0,">1 nonsynonymous","R16K N58S F134Y N151F",4
"lib1","SARS-CoV-2","CTTAAACTGTAGTAAA",7,109.51,10.79,0.03,0.05,2.93,1.03,0,">1 nonsynonymous","N1H A33V",2
"lib1","SARS-CoV-2","CTTAAAGAACCGCTTG",3,22.7,6.78,-3.98,0.35,1.5,1.05,0.02,">1 nonsynonymous","C102V Q144L",2
"lib1","SARS-CoV-2","CTTAAAGAACGATGAC",1,17.13,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","P82E S129D S139G",3
"lib1","SARS-CoV-2","CTTAAAGAATTGATAA",2,20.87,8.34,-2.42,0.22,1.59,1.15,0.02,">1 nonsynonymous","E10N N40V P149L S184F",4
"lib1","SARS-CoV-2","CTTAAAGATGTTATCA",9,39.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N13Y Q79G N107Y N120P C150G",5
"lib1","SARS-CoV-2","CTTAAAGCACGCACTG",4,100.7,10.46,-0.31,0.07,2.86,1,0,">1 nonsynonymous","N4Y S139A",2
"lib1","SARS-CoV-2","CTTAAAGGATACGTTA",13,103.1,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","C49Q T140Y N157G",3
"lib1","SARS-CoV-2","CTTAAAGTATTTTATG",1,10.49,8.04,-2.72,0.5,1.5,1,0.06,">1 nonsynonymous","V37D A105L P149R N157I",4
"lib1","SARS-CoV-2","CTTAAAGTCAGTCCAC",3,64.37,10.1,-0.66,0.06,2.67,1.03,0,"1 nonsynonymous","P133M",1
"lib1","SARS-CoV-2","CTTAAAGTGACGAAGG",1,36.86,10.3,-0.46,0.04,2.89,1.06,0,">1 nonsynonymous","F8I G155K",2
"lib1","SARS-CoV-2","CTTAAATAAATCATCG",7,62.84,10.22,-0.55,0.07,2.61,1.03,0,">1 nonsynonymous","N107G S147W F156T Q163V",4
"lib1","SARS-CoV-2","CTTAAATACCATGGTG",8,66.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6G G86T D112I",3
"lib1","SARS-CoV-2","CTTAAATACCATTCAA",6,40.17,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L57W F99C S113D",3
"lib1","SARS-CoV-2","CTTAAATATAAATCGC",5,34.74,6.02,-4.75,2,1.5,1.21,0.06,">1 nonsynonymous","N13I N24H K87Y G117L",4
"lib1","SARS-CoV-2","CTTAAATATGATCAAA",2,16.68,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","C6Y K87S D112E",3
"lib1","SARS-CoV-2","CTTAAATATTACATCT",2,45.08,7.32,-3.44,0.2,1.59,1.11,0.01,">1 nonsynonymous","L38F Q84R S113F",3
"lib1","SARS-CoV-2","CTTAAATGAAACCATA",8,102.96,10.78,0.02,0.07,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAAATGATACGAAA",8,85.14,10.82,0.05,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAAATGTCCGAACG",10,86.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F70Y E135D Y178Q",3
"lib1","SARS-CoV-2","CTTAAATTAATATGAA",1,86.69,8.49,-2.27,0.13,2.97,1.03,0.01,"1 nonsynonymous","Y175Q",1
"lib1","SARS-CoV-2","CTTAAATTTAGTATCG",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91C F99S F126R",3
"lib1","SARS-CoV-2","CTTAACAAACGAATAG",1,10.66,10.67,-0.1,0.18,2.83,1.07,0.01,">1 nonsynonymous","I2F S43R A81V",3
"lib1","SARS-CoV-2","CTTAACAAATGAATGG",1,22.8,9.26,-1.51,0.19,1.83,1.15,0.02,">1 nonsynonymous","Y93F N151I",2
"lib1","SARS-CoV-2","CTTAACAACCAATTCA",2,9.27,7.03,-3.73,0.31,1.7,1.22,0.03,">1 nonsynonymous","D59E N107V K128F T148L",4
"lib1","SARS-CoV-2","CTTAACAACCGTCTGC",1,95.94,8.16,-2.61,0.14,2.53,1.11,0.01,">1 nonsynonymous","E141I N171D",2
"lib1","SARS-CoV-2","CTTAACAATAACAATA",2,32.19,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F44N N64T R124C F126V R136L F160D",6
"lib1","SARS-CoV-2","CTTAACAATAAGAAAA",1,50.38,10.84,0.07,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAACAATATAGGAT",1,40.02,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R27C Y143T Y175N",3
"lib1","SARS-CoV-2","CTTAACAATTACAGGT",4,40.8,9.66,-1.11,0.21,2.01,1.09,0.02,">1 nonsynonymous","C6L I104G",2
"lib1","SARS-CoV-2","CTTAACACAGAGACGG",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y D34Y Q168F",3
"lib1","SARS-CoV-2","CTTAACACAGCTTTTT",1,3.93,NA,NA,NA,NA,NA,NA,"stop","L162K P177*",2
"lib1","SARS-CoV-2","CTTAACACATGATCCA",2,19.3,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N4A E10D A33C S69R N92S N118S Y143S Q168E",8
"lib1","SARS-CoV-2","CTTAACAGAGCACTTG",5,15.57,6.74,-4.02,0.65,3,1.11,0.01,">1 nonsynonymous","T15F V103W G166F",3
"lib1","SARS-CoV-2","CTTAACAGATTATGCA",4,122.42,10.67,-0.09,0.05,2.84,1.03,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","CTTAACATAACACGGA",6,177.5,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L95I Y119D Y175M",3
"lib1","SARS-CoV-2","CTTAACATAACCTTCA",1,5.43,6.21,-4.55,1.05,1.5,1.05,0.05,">1 nonsynonymous","R16V P96R V103F",3
"lib1","SARS-CoV-2","CTTAACATCAAACGGT",2,21.38,7.92,-2.84,0.11,1.91,1.05,0,">1 nonsynonymous","C61N F167M",2
"lib1","SARS-CoV-2","CTTAACATCCATGATA",2,10.68,10.51,-0.26,0.12,2.83,1.1,0.01,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","CTTAACATCTAAACGA",3,64.04,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N58T R73P P96D G196D",4
"lib1","SARS-CoV-2","CTTAACCAACAAGTGA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K T140L P191R",3
"lib1","SARS-CoV-2","CTTAACCAAGAAATCA",17,189.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L38G G51L V103G I138T P149W",5
"lib1","SARS-CoV-2","CTTAACCACAAATGAC",7,59.96,6,-4.76,2,3,1.14,0,">1 nonsynonymous","E10V Y39K D97W G172S",4
"lib1","SARS-CoV-2","CTTAACCCAAACCCAA",3,18.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90A A105D F167M",3
"lib1","SARS-CoV-2","CTTAACCCATTTGAGC",3,31.68,9.86,-0.9,0.15,2.26,1.1,0.01,">1 nonsynonymous","C6P S41Y",2
"lib1","SARS-CoV-2","CTTAACCGAGTGCATT",2,6.48,6.34,-4.42,2,1.5,1.25,0.07,">1 nonsynonymous","V20S R27L D68G",3
"lib1","SARS-CoV-2","CTTAACCTAGACGACG",10,105.7,10.69,-0.08,0.06,2.73,1.07,0,">1 nonsynonymous","T148S L188Y T201V",3
"lib1","SARS-CoV-2","CTTAACCTGAACTACA",2,3.83,NA,NA,NA,NA,NA,NA,"stop","I2A L60*",2
"lib1","SARS-CoV-2","CTTAACGATCCCTGGC",14,189.75,10.47,-0.3,0.04,2.87,1.03,0,">1 nonsynonymous","G51C L122K",2
"lib1","SARS-CoV-2","CTTAACGATTGCTACA",9,272.55,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","R27P P169F Y175G",3
"lib1","SARS-CoV-2","CTTAACGCCAGACGAA",3,5.75,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","L5G N13S D98V G146F V180Y",5
"lib1","SARS-CoV-2","CTTAACGGAACCAGTA",5,69.77,10.68,-0.09,0.05,2.9,1.07,0,"1 nonsynonymous","S53G",1
"lib1","SARS-CoV-2","CTTAACGGATAAAAGT",4,49.4,10.15,-0.61,0.06,2.91,1,0,">1 nonsynonymous","A14G G174D",2
"lib1","SARS-CoV-2","CTTAACGGATGGTAAG",4,62.31,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","C61L G117Q Q176K",3
"lib1","SARS-CoV-2","CTTAACGGGATAGACA",2,8.12,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","V20T I28A A89L D98F",4
"lib1","SARS-CoV-2","CTTAACTAACGTCATT",4,17.45,8.8,-1.96,0.23,1.77,1.18,0.03,">1 nonsynonymous","G9C S43W F62L K94A",4
"lib1","SARS-CoV-2","CTTAACTAGATTATGT",1,7.19,6,-4.76,2,3,1.04,0,">1 nonsynonymous","N1I K56A T100P",3
"lib1","SARS-CoV-2","CTTAACTCTGATAGAC",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S A33N N64P N92S V103H S113A K128P",7
"lib1","SARS-CoV-2","CTTAACTGCAGTAAAT",8,0,NA,NA,NA,NA,NA,NA,"stop","Q84* D90R L95V",3
"lib1","SARS-CoV-2","CTTAACTGCCGAAGCA",4,62.69,9.9,-0.87,0.09,2.09,1.04,0,">1 nonsynonymous","I28G S147Y",2
"lib1","SARS-CoV-2","CTTAACTGCTCAACAA",7,136.14,10.49,-0.27,0.06,2.94,1.02,0,">1 nonsynonymous","K87S V173K",2
"lib1","SARS-CoV-2","CTTAACTGTTTATCTC",3,36.5,9.2,-1.56,0.13,2.77,1.16,0.01,">1 nonsynonymous","S41F Y119P",2
"lib1","SARS-CoV-2","CTTAACTTTACAGAAT",3,1.1,NA,NA,NA,NA,NA,NA,"stop","V115L L122*",2
"lib1","SARS-CoV-2","CTTAACTTTGACTGAA",3,35.63,9.01,-1.75,0.22,1.5,1.09,0.02,">1 nonsynonymous","T100D Y121N",2
"lib1","SARS-CoV-2","CTTAAGAAAAAAGAGT",3,36.85,10.3,-0.47,0.05,2.89,1.02,0,">1 nonsynonymous","N58L R136K",2
"lib1","SARS-CoV-2","CTTAAGAAATTGATCT",16,131.41,7.66,-3.1,0.21,1.5,1.18,0.01,">1 nonsynonymous","F8P N109Y",2
"lib1","SARS-CoV-2","CTTAAGAACCCCGAAA",1,6.77,6.11,-4.65,1.07,1.8,1.17,0.04,">1 nonsynonymous","C6N C61R D90R Y123N N151K",5
"lib1","SARS-CoV-2","CTTAAGAAGCAAATAA",8,190.31,10.78,0.02,0.07,2.92,1.06,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","CTTAAGACAATAGGCA",1,17.11,10.07,-0.69,0.12,2.5,1.02,0.01,">1 nonsynonymous","C6I E141A",2
"lib1","SARS-CoV-2","CTTAAGACTTCGAATA",2,34.87,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","V71R",1
"lib1","SARS-CoV-2","CTTAAGAGATAATTGA",1,34.69,10.65,-0.11,0.08,2.89,1.08,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","CTTAAGATACTCTCGA",5,16.61,6.84,-3.93,0.39,1.5,1.12,0.03,">1 nonsynonymous","R27C S45P C61S G83D D90L N171F",6
"lib1","SARS-CoV-2","CTTAAGATTACAGTTA",4,4.55,NA,NA,NA,NA,NA,NA,"stop","V37P A42K Y66* Y123T K199L",5
"lib1","SARS-CoV-2","CTTAAGCACCGTACCT",3,35.62,10.69,-0.07,0.08,2.91,1.02,0,">1 nonsynonymous","K26T V32A",2
"lib1","SARS-CoV-2","CTTAAGCAGTAGGCAT",1,26.85,10.28,-0.49,0.07,2.79,1.13,0,">1 nonsynonymous","T55I D98S P133A",3
"lib1","SARS-CoV-2","CTTAAGCTCAACAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","G51L L57V V115A N130* G174L",5
"lib1","SARS-CoV-2","CTTAAGCTTAAATCCA",16,276.45,10.71,-0.05,0.06,2.86,1.07,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","CTTAAGGACCCACGAA",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102S N107S F156R T201Y",4
"lib1","SARS-CoV-2","CTTAAGGACTCCTAGT",1,64.96,9.11,-1.66,0.13,2.23,1.14,0.01,">1 nonsynonymous","V37M R127H G174R",3
"lib1","SARS-CoV-2","CTTAAGGATAAATCTG",2,42.59,10.69,-0.08,0.09,2.87,1.05,0,"1 nonsynonymous","E186S",1
"lib1","SARS-CoV-2","CTTAAGGCTAATAAAC",12,212.49,10.74,-0.02,0.06,2.9,1.07,0,"1 nonsynonymous","K56H",1
"lib1","SARS-CoV-2","CTTAAGGTTACCTCGA",1,25.51,10.48,-0.29,0.09,2.9,1,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","CTTAAGTAAATAAGGT",2,19.22,9.11,-1.65,0.17,1.76,1.17,0.01,"1 nonsynonymous","D137Q",1
"lib1","SARS-CoV-2","CTTAAGTCCCAAAAAC",2,11.87,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","S41L F99N",2
"lib1","SARS-CoV-2","CTTAAGTGAAAACAAC",1,34.19,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V11L Y35Q G101R",3
"lib1","SARS-CoV-2","CTTAAGTGTGCATACC",8,50.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N1K A14I P96Q Y119R Y165N Y175L",6
"lib1","SARS-CoV-2","CTTAAGTTATCTACGC",1,53.33,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N157M G172Q",2
"lib1","SARS-CoV-2","CTTAATAAAAAAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* F99L",2
"lib1","SARS-CoV-2","CTTAATAAAAAATACC",12,85.53,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K48T G101R",2
"lib1","SARS-CoV-2","CTTAATAAATACTAAA",1,19.85,10.67,-0.1,0.11,2.78,1.12,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","CTTAATAACACCCTAT",9,3.5,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","CTTAATAACGGGATAC",3,19.38,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","F12V N64R D97C D137R",4
"lib1","SARS-CoV-2","CTTAATAACTCCAAAA",2,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K Y21H C61V P149L",4
"lib1","SARS-CoV-2","CTTAATAAGAAAAACA",2,75.86,10.63,-0.14,0.04,2.9,1.07,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","CTTAATAATAGGTGGA",4,16.96,10.59,-0.17,0.17,2.84,1.1,0.01,">1 nonsynonymous","I28W T201V",2
"lib1","SARS-CoV-2","CTTAATACACTGAACG",3,19.96,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N40D C102S T201R",3
"lib1","SARS-CoV-2","CTTAATACACTTATAG",8,38.23,9.65,-1.12,0.15,2.19,1.1,0.01,">1 nonsynonymous","C61Y N107S Q163G",3
"lib1","SARS-CoV-2","CTTAATACAGATGGCA",4,74.56,8.34,-2.42,0.11,2.75,1.09,0,">1 nonsynonymous","G117A S129C P169G T201A",4
"lib1","SARS-CoV-2","CTTAATACCTCAGTAA",4,49.57,10.74,-0.02,0.09,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAATACTGAGATAC",3,0.38,NA,NA,NA,NA,NA,NA,"stop","V77P V181K T201*",3
"lib1","SARS-CoV-2","CTTAATACTGAGCGAT",8,91.55,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P82I W106T",2
"lib1","SARS-CoV-2","CTTAATAGAAACGATA",3,32.11,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","S36H K87S K128C I138K V153Y",5
"lib1","SARS-CoV-2","CTTAATAGCAAAACCT",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P K48R P96L F99S D112Q",5
"lib1","SARS-CoV-2","CTTAATAGCATATCCA",6,3.53,NA,NA,NA,NA,NA,NA,"stop","P161R C195*",2
"lib1","SARS-CoV-2","CTTAATAGTTTGAGTG",4,24.58,8.85,-1.91,0.22,1.5,1.14,0.03,">1 nonsynonymous","I2V C49V E141R S184I",4
"lib1","SARS-CoV-2","CTTAATATAAGCAAAC",4,12.21,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V77K V180T",2
"lib1","SARS-CoV-2","CTTAATATCGCTTTAG",6,39.18,6.09,-4.68,1.01,1.5,1.24,0.02,">1 nonsynonymous","S43G R127S Y165L",3
"lib1","SARS-CoV-2","CTTAATATGCATAATA",4,46.01,10.77,0.01,0.05,2.89,1.06,0,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","CTTAATATGCATTACG",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V A89Q L122M S129Y",4
"lib1","SARS-CoV-2","CTTAATATTCTACAGC",1,21.15,10.02,-0.74,0.07,2.85,1.01,0,">1 nonsynonymous","P7F V173W",2
"lib1","SARS-CoV-2","CTTAATCATCACACAA",1,24.46,9.46,-1.3,0.16,1.91,1.16,0.01,">1 nonsynonymous","P7S C61V L183W",3
"lib1","SARS-CoV-2","CTTAATCCCGATAAAA",1,0.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","CTTAATCCGATGACTT",3,20.85,6.46,-4.3,0.57,1.5,1.07,0.04,">1 nonsynonymous","G9D F47D Y66K Y143I A190L",5
"lib1","SARS-CoV-2","CTTAATCGAAGTTGGA",4,81.83,10.05,-0.71,0.07,2.85,1,0,">1 nonsynonymous","I2G R78G A89V",3
"lib1","SARS-CoV-2","CTTAATCGCCTAGACG",4,0.08,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib1","SARS-CoV-2","CTTAATCTGCACGCTA",6,22.11,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D98I V103Y T201S",3
"lib1","SARS-CoV-2","CTTAATCTTAAAATTG",5,64.96,7.45,-3.31,0.23,1.5,1.16,0.01,">1 nonsynonymous","A14L G146C",2
"lib1","SARS-CoV-2","CTTAATCTTTGATAAT",3,0.91,NA,NA,NA,NA,NA,NA,"stop","S45L C61N A89S G101* P149L S200T",6
"lib1","SARS-CoV-2","CTTAATGAAATTATAC",4,54.84,10.82,0.05,0.09,2.87,1.07,0,">1 nonsynonymous","K56S F134Y",2
"lib1","SARS-CoV-2","CTTAATGAGCGATTAC",3,42.28,8.79,-1.98,0.08,2.69,1.11,0,">1 nonsynonymous","F62G S113T",2
"lib1","SARS-CoV-2","CTTAATGCTTCGAGTT",2,43.24,10.83,0.07,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAATGGTAAAATTT",3,45.31,10.83,0.06,0.07,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAATGTGCAATAAT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","L5* P82E K94* P133T",4
"lib1","SARS-CoV-2","CTTAATTAACTATGTA",2,6.95,7.47,-3.29,0.52,1.5,1.01,0.08,">1 nonsynonymous","L5F D97R C158R",3
"lib1","SARS-CoV-2","CTTAATTATAAAGTAT",5,17.26,10.57,-0.2,0.07,2.83,1.12,0,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","CTTAATTATAGAAGTT",9,114.8,8.91,-1.85,0.25,1.5,1.03,0.03,">1 nonsynonymous","R16W Y66L A81I",3
"lib1","SARS-CoV-2","CTTAATTATCAATAAA",2,33.11,9.83,-0.93,0.16,1.86,1.16,0.01,">1 nonsynonymous","T55Y F99H",2
"lib1","SARS-CoV-2","CTTAATTATTAAACAA",5,17.99,6,-4.76,1.13,1.89,1.11,0.01,">1 nonsynonymous","L57F D90N D98W S129R R136K C158N",6
"lib1","SARS-CoV-2","CTTAATTGATGAATAC",1,1.13,NA,NA,NA,NA,NA,NA,"stop","Y35* T140E N157R",3
"lib1","SARS-CoV-2","CTTAATTGCCGAATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N L162H",2
"lib1","SARS-CoV-2","CTTAATTGTTAAAACG",4,25.53,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","I88W",1
"lib1","SARS-CoV-2","CTTAATTTATCTTTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","L95M D97S V103E S113W Y119* C158L",6
"lib1","SARS-CoV-2","CTTACAAAAAATTGAA",4,60.89,9.46,-1.3,0.09,2.56,1.15,0,">1 nonsynonymous","V37C K56V G174Y",3
"lib1","SARS-CoV-2","CTTACAAAACTAATTA",5,121.56,9.33,-1.44,0.08,2.4,1.12,0,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","CTTACAAAATCTTTTG",4,17.02,7.03,-3.73,0.49,1.5,1.08,0.05,">1 nonsynonymous","N1R Q84K C102D N109D Y119L R179T",6
"lib1","SARS-CoV-2","CTTACAAAATTATAAA",4,0.55,NA,NA,NA,NA,NA,NA,"stop","V103* L162A",2
"lib1","SARS-CoV-2","CTTACAAACTACCCTT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S K94G Y123C P133S S139N P149R",6
"lib1","SARS-CoV-2","CTTACAAATCACAAAA",6,48.59,6.23,-4.54,0.49,1.5,1.13,0.01,">1 nonsynonymous","S19R K114R N118T K128P",4
"lib1","SARS-CoV-2","CTTACAAATGATAAAT",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114M Y123L",2
"lib1","SARS-CoV-2","CTTACAAATGTCAGTG",6,113.11,8.61,-2.15,0.09,2.77,1.03,0,">1 nonsynonymous","Q144L P149E N157G",3
"lib1","SARS-CoV-2","CTTACAAATTCCATAC",5,42.4,6.54,-4.23,0.48,1.5,1.17,0.02,">1 nonsynonymous","P7M N107D R127T",3
"lib1","SARS-CoV-2","CTTACAACACACTCAT",2,20.26,10.43,-0.33,0.37,1.5,1,0.05,"1 nonsynonymous","C49A",1
"lib1","SARS-CoV-2","CTTACAACACCCATTT",3,1.43,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CTTACAACATACAAGA",2,19.56,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G83V S113Y L122I",3
"lib1","SARS-CoV-2","CTTACAACGACGATGG",6,110.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","CTTACAATAAGAGTTT",10,148.73,10.28,-0.49,0.03,2.84,1.03,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","CTTACAATAGTGGGTG",2,35.58,7.94,-2.83,0.21,1.58,1.12,0.01,">1 nonsynonymous","T55G F62M G146L",3
"lib1","SARS-CoV-2","CTTACAATCACTTACA",1,17.21,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","R27L S45C C49F D97C K198S",5
"lib1","SARS-CoV-2","CTTACAATTGAGAAAT",6,55.92,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N30L I104V N110G Y165V V182D",5
"lib1","SARS-CoV-2","CTTACACAAAAACCAT",1,22.78,10.17,-0.59,0.14,2.46,1.22,0.01,">1 nonsynonymous","S19T G51N",2
"lib1","SARS-CoV-2","CTTACACAAACACGAG",6,54.77,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","R27S Y35I S108P T201Y",4
"lib1","SARS-CoV-2","CTTACACAAACAGAGT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","D34A K87* A105F F126H",4
"lib1","SARS-CoV-2","CTTACACAACACGAAT",1,1.68,NA,NA,NA,NA,NA,NA,"stop","T55F D90M Y119* Y143I Y175C",5
"lib1","SARS-CoV-2","CTTACACATTAAGAAT",1,5.65,10.61,-0.15,0.18,2.92,1.12,0.01,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","CTTACACCATTATTAC",6,90,10.7,-0.06,0.06,2.87,1.05,0,">1 nonsynonymous","L5A P149I",2
"lib1","SARS-CoV-2","CTTACACGACTAACTT",3,20.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K K56W",2
"lib1","SARS-CoV-2","CTTACACGTATCGTTC",8,32.47,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","D34L R127L",2
"lib1","SARS-CoV-2","CTTACACTTAACGTAG",3,15.57,10.7,-0.06,0.06,2.89,1.05,0,">1 nonsynonymous","R16T L95I N120Y",3
"lib1","SARS-CoV-2","CTTACAGAAGACAACT",4,89.35,9.44,-1.32,0.16,2.09,1.14,0.01,">1 nonsynonymous","Y21T R27L K114L",3
"lib1","SARS-CoV-2","CTTACAGATTAAAAAA",1,19.29,10.7,-0.07,0.11,2.95,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTTACAGGATTCAATA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L S53P",2
"lib1","SARS-CoV-2","CTTACATCGATGTCAT",9,46.38,6.15,-4.61,1.05,1.5,1.23,0.03,">1 nonsynonymous","P7T V37Y C49L V181L L183I",5
"lib1","SARS-CoV-2","CTTACATCTTTCTAAT",1,34.16,6.6,-4.17,0.49,1.5,1.09,0.03,">1 nonsynonymous","S53A G146V L162P",3
"lib1","SARS-CoV-2","CTTACATGGATGATGG",3,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W A42P P82G F99T G152A",5
"lib1","SARS-CoV-2","CTTACATTTACGAAAT",1,6.46,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A42W P54K Y91P",3
"lib1","SARS-CoV-2","CTTACCAAAAGACCGC",5,70.66,9.96,-0.81,0.22,1.64,1.07,0.02,">1 nonsynonymous","L60M G86D P149A",3
"lib1","SARS-CoV-2","CTTACCAATTTACCCT",8,36.96,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5R V11M N120E N151C P161S Q168L A192Y",7
"lib1","SARS-CoV-2","CTTACCACAGGTCGCC",9,147.48,10.1,-0.67,0.05,2.77,1.02,0,">1 nonsynonymous","N13E C61F L131I S200L",4
"lib1","SARS-CoV-2","CTTACCACTGTCTTAT",3,74.57,6.02,-4.75,0.63,1.5,1.11,0.01,">1 nonsynonymous","R25Q S43L I80R",3
"lib1","SARS-CoV-2","CTTACCATGATATGAC",2,23.21,9.04,-1.73,0.2,1.9,1.12,0.02,">1 nonsynonymous","F12E S41T",2
"lib1","SARS-CoV-2","CTTACCCACATTCTGG",2,48.11,10.88,0.12,0.12,2.89,1.04,0.01,"1 nonsynonymous","I28M",1
"lib1","SARS-CoV-2","CTTACCCAGGTGAAAC",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G C49E Y66S",3
"lib1","SARS-CoV-2","CTTACCCATCCAAAAA",1,32.57,9.94,-0.82,0.08,2.5,1.02,0,"1 nonsynonymous","L162T",1
"lib1","SARS-CoV-2","CTTACCCGAAAAATAA",3,44.2,10.67,-0.09,0.08,2.91,1.07,0,">1 nonsynonymous","L60V T100L",2
"lib1","SARS-CoV-2","CTTACCCGATTCAACC",3,99.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9S S19M T63F Q176R V182S",5
"lib1","SARS-CoV-2","CTTACCCTATTCGTCA",1,75.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I Y165L P177A V182T",4
"lib1","SARS-CoV-2","CTTACCCTTCATAAAT",1,22.35,10.87,0.11,0.17,2.83,1,0.01,"1 nonsynonymous","L5A",1
"lib1","SARS-CoV-2","CTTACCGCGGGTATAC",5,76.8,10.62,-0.14,0.06,2.9,1.08,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","CTTACCGTTTGAGATC",1,34.62,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N40G I88K",2
"lib1","SARS-CoV-2","CTTACCTATGTAAAAA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V G83P C102M V173L",4
"lib1","SARS-CoV-2","CTTACCTATTATTTTT",3,99.71,9.74,-1.03,0.1,2.03,1.13,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","CTTACCTCATGGTCAA",1,22.35,10.73,-0.03,0.07,2.91,1.02,0,">1 nonsynonymous","K56N Y123M",2
"lib1","SARS-CoV-2","CTTACCTCTGTTTTAA",4,18.41,6.45,-4.31,0.66,1.5,1.28,0.04,">1 nonsynonymous","Q84L D137A",2
"lib1","SARS-CoV-2","CTTACCTGAAATCAAA",6,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q K56F I80F K114R Y143G G166L",6
"lib1","SARS-CoV-2","CTTACCTGAACCTGCG",7,51.49,8.61,-2.15,0.31,1.5,1,0.05,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","CTTACCTTACCAGGGG",15,214.34,9.81,-0.96,0.03,2.93,1.03,0,">1 nonsynonymous","V32T T46H T170Y",3
"lib1","SARS-CoV-2","CTTACCTTCCTATATG",2,20.51,9.94,-0.82,0.13,2,1.16,0.01,">1 nonsynonymous","D97S I104S",2
"lib1","SARS-CoV-2","CTTACGCACTCTGATC",7,5.19,NA,NA,NA,NA,NA,NA,"stop","D34K L57K P82G Y119*",4
"lib1","SARS-CoV-2","CTTACGCCCGCTTTCC",3,83.29,10.69,-0.07,0.07,2.91,1.08,0,"1 nonsynonymous","L5Q",1
"lib1","SARS-CoV-2","CTTACGCTAAAAATAA",3,15.62,6,-4.76,2,1.63,1.18,0.01,">1 nonsynonymous","A18L I80K G117S R124Q I142L K199L",6
"lib1","SARS-CoV-2","CTTACGGTAAGCCGAA",1,18.7,6,-4.76,2,3,1.18,0,">1 nonsynonymous","A14V L57C N64L A89I N130C",5
"lib1","SARS-CoV-2","CTTACGGTCTAATAAA",1,8.66,10.6,-0.17,0.14,2.85,1.09,0.01,">1 nonsynonymous","N40P S139N",2
"lib1","SARS-CoV-2","CTTACGTACGATACTT",4,81.49,10.14,-0.62,0.07,2.8,1,0,">1 nonsynonymous","R27V N107K",2
"lib1","SARS-CoV-2","CTTACGTCATCTTTAA",3,42.32,7.83,-2.93,0.19,1.78,1.09,0.01,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","CTTACGTTAATGAACC",4,56.15,10.29,-0.47,0.05,2.85,1.01,0,">1 nonsynonymous","L57H S200D",2
"lib1","SARS-CoV-2","CTTACGTTGATTGTAT",7,139.33,10.3,-0.47,0.07,2.72,1.03,0,">1 nonsynonymous","T15V S41F V173F",3
"lib1","SARS-CoV-2","CTTACGTTGGCAGAGA",7,39.76,10.27,-0.49,0.08,2.77,1,0,">1 nonsynonymous","K56V D90C",2
"lib1","SARS-CoV-2","CTTACTAACTTGTGTT",1,10.4,NA,NA,NA,NA,NA,NA,"stop","N1V F70* V153L",3
"lib1","SARS-CoV-2","CTTACTACGAGAAGAC",7,83.27,8.15,-2.61,0.25,1.5,1.11,0.02,">1 nonsynonymous","A105I Q176M",2
"lib1","SARS-CoV-2","CTTACTACGCCAAAAA",4,191.36,10.08,-0.68,0.07,2.05,1.04,0,">1 nonsynonymous","T3L F99L",2
"lib1","SARS-CoV-2","CTTACTACGTTCTATA",3,86.66,10.57,-0.19,0.05,2.85,1.07,0,"1 nonsynonymous","T85W",1
"lib1","SARS-CoV-2","CTTACTATATTACGAA",2,13.49,6,-4.76,1.21,3,1.07,0,">1 nonsynonymous","S41A L95S N130Q T201K",4
"lib1","SARS-CoV-2","CTTACTATGTATTTAA",6,78.64,10.76,0,0.06,2.87,1.07,0,"1 nonsynonymous","D97I",1
"lib1","SARS-CoV-2","CTTACTATTGACAGGA",6,121.94,10.7,-0.06,0.05,2.9,1.04,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","CTTACTCAAATCTTCT",3,28.99,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I80D D97K G152I",3
"lib1","SARS-CoV-2","CTTACTCATGACTAGG",2,33.31,10.78,0.01,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTACTCCTGGAGGCT",6,21.96,9.03,-1.74,0.19,2.57,1.1,0.02,">1 nonsynonymous","C61G I142N",2
"lib1","SARS-CoV-2","CTTACTCGCAGACACC",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W A33T K56A N107G D112L K132W Q176R",7
"lib1","SARS-CoV-2","CTTACTCGTTAATTAT",1,22.93,10.76,0,0.06,2.96,1,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","CTTACTCTTACGGTAA",1,18.24,6,-4.76,2,1.5,1.42,0.06,">1 nonsynonymous","V20S V32A F47T L95S",4
"lib1","SARS-CoV-2","CTTACTGACACATAAT",1,17.16,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A105E N118P",2
"lib1","SARS-CoV-2","CTTACTGACGCGGCTG",4,11.33,8.62,-2.15,0.14,2.66,1.06,0.01,">1 nonsynonymous","Y119A F156G",2
"lib1","SARS-CoV-2","CTTACTGGGATTCCAA",2,130.46,9.88,-0.88,0.05,2.67,1,0,">1 nonsynonymous","C6Y K48R T55F",3
"lib1","SARS-CoV-2","CTTACTGGGTAAAGTA",1,27.62,10.6,-0.16,0.21,2.51,1.05,0.02,">1 nonsynonymous","E10N D98S L183T",3
"lib1","SARS-CoV-2","CTTACTGGTCACCCCC",9,121.05,10.81,0.05,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTACTTAATTACAAG",1,27.95,10.12,-0.64,0.08,2.94,1,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","CTTACTTAATTATCTA",2,7.46,10.34,-0.42,0.07,3,1.02,0,">1 nonsynonymous","D90S T140K",2
"lib1","SARS-CoV-2","CTTACTTACATCCCTT",3,134.25,9.02,-1.75,0.06,2.76,1.11,0,">1 nonsynonymous","T15V P169D",2
"lib1","SARS-CoV-2","CTTACTTACGTACTTC",10,150.6,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T15S A42V F62A G83N S108F P133F P177S",7
"lib1","SARS-CoV-2","CTTACTTATACTAACA",9,88.08,8.63,-2.14,0.15,1.5,1.11,0.01,">1 nonsynonymous","T15H S36W S45P L60R",4
"lib1","SARS-CoV-2","CTTAGAAAAGCTCTGA",2,13.31,6,-4.76,1.04,3,1.02,0.01,">1 nonsynonymous","F12M F167D",2
"lib1","SARS-CoV-2","CTTAGAAACCATGTTC",5,76.23,10.56,-0.2,0.03,2.92,1.05,0,">1 nonsynonymous","C61N T140V",2
"lib1","SARS-CoV-2","CTTAGAAACCTAAGTA",2,56.43,9.8,-0.96,0.13,1.99,1.07,0.01,">1 nonsynonymous","F12C S129H",2
"lib1","SARS-CoV-2","CTTAGAAATCCAGCAA",7,124.27,10.41,-0.35,0.05,2.92,1.03,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","CTTAGAAATTACAGGT",1,25.72,10.2,-0.56,0.07,2.9,1,0,">1 nonsynonymous","C61R N151I Y175F",3
"lib1","SARS-CoV-2","CTTAGAACAAGGTCTC",3,9.8,10.77,0.01,0.12,2.73,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTAGAACCATAAGCT",4,29.99,9.86,-0.9,0.11,2.07,1.04,0.01,">1 nonsynonymous","L5N S129P E141W T193P",4
"lib1","SARS-CoV-2","CTTAGAACCCCCCTAT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","V77M D97* R124E C150N",4
"lib1","SARS-CoV-2","CTTAGAACGATTGCGA",6,11.93,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","N4A L125R Y165V V182Y",4
"lib1","SARS-CoV-2","CTTAGAAGAAAAATAA",5,70.46,10.46,-0.31,0.04,2.88,1.04,0,">1 nonsynonymous","T85N Y123M",2
"lib1","SARS-CoV-2","CTTAGAAGTATTTAAC",2,16.29,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","F99E K128I R136V",3
"lib1","SARS-CoV-2","CTTAGAATAATCATGT",1,15.2,10.12,-0.64,0.18,2.67,1.02,0.01,">1 nonsynonymous","K56C D98V",2
"lib1","SARS-CoV-2","CTTAGAATAATTGCAG",1,22.98,10.11,-0.66,0.07,2.94,1,0,">1 nonsynonymous","N64S Q84R F126V",3
"lib1","SARS-CoV-2","CTTAGAATACTCAACG",1,18.72,10.55,-0.21,0.12,2.97,1.05,0.01,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","CTTAGACAAATTCCTG",5,45.83,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N107W Q144G",2
"lib1","SARS-CoV-2","CTTAGACATGATGTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H Y93E A105G D112S R124W G152C",6
"lib1","SARS-CoV-2","CTTAGACTAGAGACAA",4,12.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6W Y165E G172E",3
"lib1","SARS-CoV-2","CTTAGACTATGCGCAA",2,52.42,10.28,-0.48,0.09,2.6,1.04,0,">1 nonsynonymous","N1G V180T",2
"lib1","SARS-CoV-2","CTTAGACTTGATTCAT",11,186.22,10.68,-0.09,0.05,2.94,1.02,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","CTTAGACTTTTAGTCT",2,59.58,8.4,-2.36,0.26,1.5,1,0.02,">1 nonsynonymous","S41T D90W N120C K128A G166K",5
"lib1","SARS-CoV-2","CTTAGAGACGTATCTC",1,15.26,10.27,-0.49,0.07,2.92,1.02,0,"1 nonsynonymous","T170A",1
"lib1","SARS-CoV-2","CTTAGAGAGGCCCGCG",2,17.32,10.75,-0.01,0.07,2.93,1.03,0,">1 nonsynonymous","S36N P54I V173F T201Y",4
"lib1","SARS-CoV-2","CTTAGAGATAACGAAA",1,7.92,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","R124P",1
"lib1","SARS-CoV-2","CTTAGAGCTACCCTTC",2,33.91,10.8,0.03,0.06,2.91,1.06,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","CTTAGAGTCCACACAT",4,17.97,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6R S45V A89F D98V",4
"lib1","SARS-CoV-2","CTTAGATACCCATCGG",7,96,7.03,-3.73,0.23,1.5,1.09,0.01,">1 nonsynonymous","V37R G117A R127N",3
"lib1","SARS-CoV-2","CTTAGATACGCATGAA",2,19.86,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","CTTAGATAGACCGGAC",4,54.3,10.7,-0.07,0.05,2.94,1.02,0,"1 nonsynonymous","N58T",1
"lib1","SARS-CoV-2","CTTAGATCTTTCAGGT",5,46.98,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","P54R D112G G116K K132V",4
"lib1","SARS-CoV-2","CTTAGATGTCTGCTAA",3,7.88,6,-4.76,2,3,1.08,0,">1 nonsynonymous","F99S P161L",2
"lib1","SARS-CoV-2","CTTAGATTCACGACCA",5,22.48,6,-4.76,2,3,1.16,0.01,"1 nonsynonymous","R124G",1
"lib1","SARS-CoV-2","CTTAGCACGATGTTCT",3,1.15,NA,NA,NA,NA,NA,NA,"stop","C61S K87S Y121*",3
"lib1","SARS-CoV-2","CTTAGCACTAGTAGTT",7,0.61,NA,NA,NA,NA,NA,NA,"stop","C6H F44R D98M G174*",4
"lib1","SARS-CoV-2","CTTAGCAGCAGTCGCA",5,106.89,9.69,-1.07,0.1,2.11,1.08,0,">1 nonsynonymous","C102L N151T",2
"lib1","SARS-CoV-2","CTTAGCAGCATGTGTC",4,82.91,9.65,-1.12,0.05,2.77,1.1,0,">1 nonsynonymous","K56M T170N",2
"lib1","SARS-CoV-2","CTTAGCATTACATACT",1,24.39,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","Y35N D90L L95C",3
"lib1","SARS-CoV-2","CTTAGCATTGACACAG",6,9.93,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","S41V S113K V173P",3
"lib1","SARS-CoV-2","CTTAGCCATATATATG",1,6.78,10.76,-0.01,0.13,2.71,1.3,0.01,">1 nonsynonymous","G9T V173I",2
"lib1","SARS-CoV-2","CTTAGCCATTACAAAC",1,16.64,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","S36P N64H V71D R124L K132F T148K",6
"lib1","SARS-CoV-2","CTTAGCGACGAGTTGC",3,15.09,8.52,-2.24,0.12,2.37,1.02,0.01,">1 nonsynonymous","L122W G146V V194L",3
"lib1","SARS-CoV-2","CTTAGCGATAGACATA",4,5.95,NA,NA,NA,NA,NA,NA,"stop","T15L A22R Y50* T55Y D98W G116Q",6
"lib1","SARS-CoV-2","CTTAGCGCCACACGGA",4,12.38,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40H K87R N92M E186C T201D",5
"lib1","SARS-CoV-2","CTTAGCGGCATGCCAC",2,35.27,6,-4.76,2,3,1.19,0,">1 nonsynonymous","T85L G101V I138E C158L",4
"lib1","SARS-CoV-2","CTTAGCGTAGTTGACT",4,2.1,NA,NA,NA,NA,NA,NA,"stop","N13V P54T G86* F99A K114T F167A Y178E",7
"lib1","SARS-CoV-2","CTTAGCTAAATGTGAT",3,2.98,NA,NA,NA,NA,NA,NA,"stop","L5S F12R S41V N107* Y119I",5
"lib1","SARS-CoV-2","CTTAGCTGCTCAACCT",1,11.21,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10C Y35V E76T",3
"lib1","SARS-CoV-2","CTTAGCTTTATTTCCT",1,16.35,10.73,-0.04,0.07,2.96,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTAGGAAAGACCCCA",1,69.24,9.42,-1.35,0.05,2.85,1.09,0,"1 nonsynonymous","A145F",1
"lib1","SARS-CoV-2","CTTAGGAAGTTTCCCG",1,30.59,6,-4.76,2,3,1.17,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","CTTAGGAATTGCCCAA",6,0.51,NA,NA,NA,NA,NA,NA,"stop","N64C P82T V103A G116*",4
"lib1","SARS-CoV-2","CTTAGGAGAACCTTCA",1,21.51,10.41,-0.35,0.07,2.96,1,0,"1 nonsynonymous","E186S",1
"lib1","SARS-CoV-2","CTTAGGAGAAGTTAGG",1,8.83,9.69,-1.07,0.26,1.94,1.07,0.06,">1 nonsynonymous","Q84L N107K",2
"lib1","SARS-CoV-2","CTTAGGAGCGAGGGCT",8,27.4,NA,NA,NA,NA,NA,NA,"stop","L60* W106V Q176A",3
"lib1","SARS-CoV-2","CTTAGGCAAACTTGCG",1,73.61,10.54,-0.22,0.05,2.86,1.08,0,">1 nonsynonymous","R78S K128I T201E",3
"lib1","SARS-CoV-2","CTTAGGCAAATGATTA",1,20.76,11,0.23,0.14,2.9,1.01,0.01,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","CTTAGGCAACAAAATG",1,12.63,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","I28R A33Y K56P Y143I S184R",5
"lib1","SARS-CoV-2","CTTAGGCACACTGGTA",8,193.33,9.87,-0.9,0.07,1.89,1.08,0,">1 nonsynonymous","A81L A89S",2
"lib1","SARS-CoV-2","CTTAGGCGTGATCCAG",2,41.87,9.22,-1.54,0.09,2.64,1.13,0,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","CTTAGGCTGTAGCTAC",3,119.56,10.73,-0.03,0.04,2.94,1.02,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","CTTAGGGAAACAAATG",3,53.89,8.72,-2.05,0.14,2.37,1.14,0.01,">1 nonsynonymous","A14H G117S",2
"lib1","SARS-CoV-2","CTTAGGGGATACAACA",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S53L G86V Y93S G166M",5
"lib1","SARS-CoV-2","CTTAGGGTTAGCAGTG",1,15.52,9.85,-0.92,0.24,2.26,1.16,0.01,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","CTTAGGTCTGCTTTCA",8,135.56,6.2,-4.57,0.74,1.5,1.21,0.02,">1 nonsynonymous","Y35T Y165A",2
"lib1","SARS-CoV-2","CTTAGTAAACTGTTGA",2,7.69,10.64,-0.13,0.21,2.85,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTTAGTAAAGTGTCTT",2,62.7,9.9,-0.86,0.04,2.88,1.03,0,">1 nonsynonymous","G9Y S139R E154I",3
"lib1","SARS-CoV-2","CTTAGTACGACGTATT",6,155.93,6.62,-4.14,0.34,1.5,1.17,0.01,">1 nonsynonymous","F8Y N58I G117P T201S",4
"lib1","SARS-CoV-2","CTTAGTACGAGCATAG",6,27.27,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C6V C49R N118K F167C",4
"lib1","SARS-CoV-2","CTTAGTATAGGTTATG",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T G152F V181R T201M",4
"lib1","SARS-CoV-2","CTTAGTATCACAGAGG",9,110.65,6.01,-4.76,0.67,1.5,1.15,0.01,">1 nonsynonymous","G86L G172F",2
"lib1","SARS-CoV-2","CTTAGTCAATTATTTG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","T170*",1
"lib1","SARS-CoV-2","CTTAGTCACAACGTAG",6,18.9,7.28,-3.48,0.26,1.5,1.01,0.02,">1 nonsynonymous","C6S T15G A22T P169A",4
"lib1","SARS-CoV-2","CTTAGTCCAACTTATT",3,111.46,9.91,-0.85,0.11,1.99,1.08,0,">1 nonsynonymous","R27I L38S",2
"lib1","SARS-CoV-2","CTTAGTCGACGATGGC",3,46.08,8.28,-2.49,0.23,1.5,1.04,0.02,">1 nonsynonymous","G51Y R73K H189I",3
"lib1","SARS-CoV-2","CTTAGTGACGGGTGAC",10,13.29,6.94,-3.82,0.5,1.5,1.15,0.03,">1 nonsynonymous","S45Y P54C K94L I104D G146W K199H",6
"lib1","SARS-CoV-2","CTTAGTGAGCTACATA",5,26.59,6.47,-4.29,0.69,1.5,1.16,0.06,">1 nonsynonymous","V103Q Y159L",2
"lib1","SARS-CoV-2","CTTAGTGTCTGGCGAA",3,148.48,10.19,-0.58,0.03,2.92,1.02,0,">1 nonsynonymous","C6M L122T",2
"lib1","SARS-CoV-2","CTTAGTTAACAGTCAA",1,10.53,8.91,-1.85,0.28,1.5,1,0.04,">1 nonsynonymous","F8S S41F S53P",3
"lib1","SARS-CoV-2","CTTAGTTAGAACAAAG",2,25.25,10.26,-0.5,0.09,2.73,1.1,0,">1 nonsynonymous","T63E S129A E141Y S184N",4
"lib1","SARS-CoV-2","CTTATAAAAACCAAAG",4,19.99,7.88,-2.89,0.25,1.5,1.08,0.02,">1 nonsynonymous","K128Y S139I Q144T",3
"lib1","SARS-CoV-2","CTTATAAAACCTGAAA",1,18.24,10.22,-0.54,0.1,2.87,1.04,0,">1 nonsynonymous","T15I Y178F",2
"lib1","SARS-CoV-2","CTTATAAAATATCCAA",7,85.84,10.09,-0.67,0.09,2.29,1.03,0,">1 nonsynonymous","V11A D97R Y178H",3
"lib1","SARS-CoV-2","CTTATAAACGAGCTAA",3,69.22,10.01,-0.75,0.11,2.25,1.02,0.01,">1 nonsynonymous","A14R L57T",2
"lib1","SARS-CoV-2","CTTATAAAGCGCGAAT",3,6.58,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V103R Y121V P149R F160I S184V",5
"lib1","SARS-CoV-2","CTTATAAATGACGAAC",5,73.05,10.76,-0.01,0.06,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTATAAATTAACTAG",3,35.39,8.3,-2.47,0.2,1.83,1.18,0.01,">1 nonsynonymous","F8R A42S K87S",3
"lib1","SARS-CoV-2","CTTATAACATTAGCCA",5,100.79,10.22,-0.54,0.07,2.84,1,0,">1 nonsynonymous","V11F V37L",2
"lib1","SARS-CoV-2","CTTATAACCCGACCAT",7,52.22,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F70A Y93L P169I",3
"lib1","SARS-CoV-2","CTTATAACCTACCCAA",1,32.23,8.25,-2.52,0.16,2.41,1.11,0.01,">1 nonsynonymous","N4L L125D L188R",3
"lib1","SARS-CoV-2","CTTATAACTGTTAATC",1,2.68,NA,NA,NA,NA,NA,NA,"stop","N1S T3* E141F Y165L Y175I L187M",6
"lib1","SARS-CoV-2","CTTATAAGAACCACGT",10,134.99,8.63,-2.13,0.19,1.5,1.14,0.02,">1 nonsynonymous","Y50R P149T",2
"lib1","SARS-CoV-2","CTTATAATAACACACG",13,70.31,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","F99N",1
"lib1","SARS-CoV-2","CTTATAATTGAAACTT",3,12.2,6,-4.76,1.03,1.5,1.16,0.04,">1 nonsynonymous","A105T E141A V180D",3
"lib1","SARS-CoV-2","CTTATAATTGAAGTCC",5,44.64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V20M Y39D I88Y D112S A190S",5
"lib1","SARS-CoV-2","CTTATACAATAGCGTA",2,18.85,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","G51R D90I F99L S184T",4
"lib1","SARS-CoV-2","CTTATACACCCACCCA",1,78.08,10.77,0,0.04,2.94,1.01,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","CTTATACAGCAAAAAG",7,39.84,10.25,-0.52,0.04,2.81,1.11,0,">1 nonsynonymous","T85N Y121L K128N",3
"lib1","SARS-CoV-2","CTTATACCACACTCCA",1,0.88,NA,NA,NA,NA,NA,NA,"stop","L38T T100M F156*",3
"lib1","SARS-CoV-2","CTTATACGAAAGCTTA",1,0.5,NA,NA,NA,NA,NA,NA,"stop","N4D I72Y G86L Q144L T148L E186T G196*",7
"lib1","SARS-CoV-2","CTTATACGAGCATTAT",2,5.96,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","F12L I28L F47E G86R N107L R127F P149Q",7
"lib1","SARS-CoV-2","CTTATACGCAGCTCCA",7,68.66,10.64,-0.12,0.05,2.97,1,0,"1 nonsynonymous","A18Y",1
"lib1","SARS-CoV-2","CTTATACGGTCCTAAG",4,70.15,10.63,-0.14,0.06,2.91,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTATAGATACACTCT",5,2.79,NA,NA,NA,NA,NA,NA,"stop","I80K A105N P149*",3
"lib1","SARS-CoV-2","CTTATAGGACAAGTGG",4,77.86,7.49,-3.27,0.19,1.5,1.12,0.01,">1 nonsynonymous","A105Q Q168D",2
"lib1","SARS-CoV-2","CTTATAGGACAGAGTA",5,16.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24Y A89V P96N I104K",4
"lib1","SARS-CoV-2","CTTATAGGCAAATTTA",2,27.72,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","Y175L V182A",2
"lib1","SARS-CoV-2","CTTATAGTCCTCAAAT",3,14.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80T S129I N171S",3
"lib1","SARS-CoV-2","CTTATAGTCTATGACA",7,79.24,9.92,-0.84,0.08,2.56,1.08,0,">1 nonsynonymous","G9L T46K N64V K114N",4
"lib1","SARS-CoV-2","CTTATATAAAACGAAA",3,52.62,10.13,-0.64,0.1,2.71,1.01,0,">1 nonsynonymous","G9L R27G L122M",3
"lib1","SARS-CoV-2","CTTATATAACGACACA",2,5.67,8.46,-2.31,0.36,1.63,1.23,0.04,">1 nonsynonymous","R25F N110V N171F S200V",4
"lib1","SARS-CoV-2","CTTATATAGATTGCAT",10,1.46,NA,NA,NA,NA,NA,NA,"stop","C49* E135M S184F",3
"lib1","SARS-CoV-2","CTTATATCTACAAACT",2,11.11,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F17S R73V G101V",3
"lib1","SARS-CoV-2","CTTATATGGTGTCTTC",3,63.94,9.77,-0.99,0.07,2.62,1.07,0,">1 nonsynonymous","A14E C61K Q84G T100A",4
"lib1","SARS-CoV-2","CTTATATGTACCGAAT",7,71.18,8.28,-2.48,0.16,2.51,1.17,0.01,">1 nonsynonymous","F62C G166L T170K",3
"lib1","SARS-CoV-2","CTTATATGTACTTGTA",1,8.28,6,-4.76,0.43,3,1.07,0,">1 nonsynonymous","K87F L183P",2
"lib1","SARS-CoV-2","CTTATATTGACAACGG",1,5.4,10.14,-0.63,0.39,2.79,1.08,0.01,"1 nonsynonymous","K128N",1
"lib1","SARS-CoV-2","CTTATCAACAAAACCA",5,6.75,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Y93V E141A P161G",3
"lib1","SARS-CoV-2","CTTATCAATTATTATC",5,48.88,9.65,-1.12,0.27,1.62,1.15,0.04,"1 nonsynonymous","V182S",1
"lib1","SARS-CoV-2","CTTATCACGCGAAAAG",2,29.74,8.4,-2.36,0.27,1.5,1.06,0.04,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","CTTATCACTTCATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35Q P82A A89W L122V I142* P149F",6
"lib1","SARS-CoV-2","CTTATCAGCGCCCAAG",1,27.47,10.4,-0.36,0.06,2.78,1.06,0,">1 nonsynonymous","R27S Y123W",2
"lib1","SARS-CoV-2","CTTATCAGTAAATCTT",2,9.72,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N1Y N40L T46I C61P P96L N107L Q176A",7
"lib1","SARS-CoV-2","CTTATCATACGACATG",3,49.79,7.97,-2.8,0.18,1.66,1.15,0.01,">1 nonsynonymous","V32R F167L G174A",3
"lib1","SARS-CoV-2","CTTATCATAGACCCAA",8,42.76,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2E F62I I88G E154K K198S",5
"lib1","SARS-CoV-2","CTTATCATATCAGTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N13Y A81* T100L E154F",4
"lib1","SARS-CoV-2","CTTATCATCACTCATG",1,5.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R C31R I88R L187M",4
"lib1","SARS-CoV-2","CTTATCCAGAAACCAT",1,34.41,6.56,-4.2,0.5,1.5,1.16,0.03,">1 nonsynonymous","S19L S43L T148I",3
"lib1","SARS-CoV-2","CTTATCCGGACAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19K V103L F185*",3
"lib1","SARS-CoV-2","CTTATCCTCGAAAACA",9,55.18,10.85,0.08,0.05,2.98,1.03,0,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","CTTATCCTCGATAACG",6,58.9,9.64,-1.12,0.14,2.19,1.09,0.01,">1 nonsynonymous","F62E Y121I",2
"lib1","SARS-CoV-2","CTTATCCTGGATAAAT",3,50.02,10.17,-0.59,0.06,2.82,1,0,"1 nonsynonymous","L57Y",1
"lib1","SARS-CoV-2","CTTATCGAGTTATCGA",1,11.96,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P7I L57S C102R",3
"lib1","SARS-CoV-2","CTTATCGCTCTGTAAC",12,59.2,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A22L F47L W106D",3
"lib1","SARS-CoV-2","CTTATCGTTATCTGAG",3,37.51,9.27,-1.5,0.07,2.78,1.12,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","CTTATCGTTTCAGTTG",2,13.76,6,-4.76,2,1.5,1.18,0.08,">1 nonsynonymous","S45C T100L N107P R136A G172L",5
"lib1","SARS-CoV-2","CTTATCTCAATCACTT",2,94.69,10.86,0.09,0.07,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTATCTTCATGCACT",1,6.75,7.32,-3.44,0.36,1.61,1.17,0.03,">1 nonsynonymous","E10R D59H K87Y N118L Q168E",5
"lib1","SARS-CoV-2","CTTATCTTTTTTGTAC",5,74.68,10.63,-0.13,0.04,2.91,1.03,0,">1 nonsynonymous","R78C T148S",2
"lib1","SARS-CoV-2","CTTATGAATCCAGTAA",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I N107Q A145F F160R",4
"lib1","SARS-CoV-2","CTTATGAATGGTAACC",6,65.89,10.2,-0.57,0.04,2.7,1.04,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","CTTATGACATGGACGT",2,41.05,10.81,0.04,0.08,2.91,1.08,0,">1 nonsynonymous","S29V V37W",2
"lib1","SARS-CoV-2","CTTATGACTTACCATA",10,238.66,8.53,-2.23,0.09,2.64,1.08,0,">1 nonsynonymous","S36T T85M G166Y",3
"lib1","SARS-CoV-2","CTTATGAGGAAAAGAA",2,124.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5N F17N Y39V G83F S129M Y178K",6
"lib1","SARS-CoV-2","CTTATGATAAAGAAGC",4,52.58,6.7,-4.06,0.26,1.5,1.15,0.01,"1 nonsynonymous","D112Q",1
"lib1","SARS-CoV-2","CTTATGATAATAAAAC",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71M E76G V103Y N110L V153R T170S",6
"lib1","SARS-CoV-2","CTTATGCACACGGACC",2,8.11,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","G86D D98S V103P F160W",4
"lib1","SARS-CoV-2","CTTATGCTAAAGAACA",1,15.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N I72P Y93T",3
"lib1","SARS-CoV-2","CTTATGCTAGCGTATC",1,6.09,6,-4.76,2,3,1.2,0.04,">1 nonsynonymous","G86T I104K L125H",3
"lib1","SARS-CoV-2","CTTATGGATTTCCTTA",8,283.43,10.72,-0.05,0.06,2.93,1.05,0,">1 nonsynonymous","S41T F160Y",2
"lib1","SARS-CoV-2","CTTATGGGGCAAAGAG",7,52.36,7.89,-2.87,0.13,2.09,1.07,0.01,">1 nonsynonymous","K87L P149L T170I",3
"lib1","SARS-CoV-2","CTTATGGTTATTCTTC",4,100.83,8.47,-2.29,0.11,2.41,1.09,0,">1 nonsynonymous","G83D Y119S N130M F156Y",4
"lib1","SARS-CoV-2","CTTATGTACAAATCCA",2,16.79,10.25,-0.52,0.13,2.79,1,0.01,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","CTTATTAAATAATAAT",7,18.51,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13A I72R D98K G116V F167P",5
"lib1","SARS-CoV-2","CTTATTAACACTGGCT",3,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V A89G Y159A N171L V180D",5
"lib1","SARS-CoV-2","CTTATTAACGACCATA",1,70.55,10.82,0.06,0.08,2.91,1.03,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","CTTATTACACCTAAAA",1,6.16,9.6,-1.16,0.23,2.63,1,0.01,">1 nonsynonymous","V52A Y121L S164N",3
"lib1","SARS-CoV-2","CTTATTACACTCTGCA",6,2.18,NA,NA,NA,NA,NA,NA,"stop","R27F T63E S69* G86P E135M",5
"lib1","SARS-CoV-2","CTTATTAGGATTAGTA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L Y91P T100P V182F",4
"lib1","SARS-CoV-2","CTTATTATAAAGATAC",1,12.13,6.08,-4.68,0.54,1.69,1.12,0,">1 nonsynonymous","L131K E141I",2
"lib1","SARS-CoV-2","CTTATTATAACGCGGA",1,7.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43Y D68V P82T I142N",4
"lib1","SARS-CoV-2","CTTATTATTCTTGTTC",3,22.77,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","T46A A105G E135T",3
"lib1","SARS-CoV-2","CTTATTATTTACAACT",5,54.32,6.11,-4.65,1.11,1.5,1.2,0.04,">1 nonsynonymous","G9K V37D N64T G101C K128M E135C",6
"lib1","SARS-CoV-2","CTTATTCAATATTAGG",5,102.31,10.47,-0.3,0.06,2.88,1.03,0,">1 nonsynonymous","K56I N64M T201W",3
"lib1","SARS-CoV-2","CTTATTCAGAAGGCGC",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V I104E",2
"lib1","SARS-CoV-2","CTTATTCAGTCTAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* P96* T100Q Y119S I142R L162P",6
"lib1","SARS-CoV-2","CTTATTCCGTACAGGG",8,72.88,10.91,0.14,0.06,2.93,1.02,0,"1 nonsynonymous","S129G",1
"lib1","SARS-CoV-2","CTTATTCGAGTTATCC",2,1.49,NA,NA,NA,NA,NA,NA,"stop","G9D N64F V77*",3
"lib1","SARS-CoV-2","CTTATTCTATAACACG",4,61.8,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G86F Y121D Y165V",3
"lib1","SARS-CoV-2","CTTATTCTGCCAGATG",3,24.18,9.74,-1.02,0.09,1.86,1.07,0,">1 nonsynonymous","A14Q L60A Y121N C195F",4
"lib1","SARS-CoV-2","CTTATTCTTTGTTACC",8,47.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G101S P133L A190S T201L",4
"lib1","SARS-CoV-2","CTTATTGAAACCAAAT",1,38.04,8.71,-2.06,0.13,2.26,1.03,0.01,">1 nonsynonymous","S43E F167L S200Q",3
"lib1","SARS-CoV-2","CTTATTGACTGTTAAT",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L K48L F62Y R127K P169D",5
"lib1","SARS-CoV-2","CTTATTGCCACATAAG",2,34.99,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A22V L60R Y119H P133Y",4
"lib1","SARS-CoV-2","CTTATTGGAACATGAC",6,87.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39D S45P D90L P96E F160P S184T",6
"lib1","SARS-CoV-2","CTTATTGGTCCCGTGC",3,25.25,10.07,-0.7,0.1,2.74,1.06,0,">1 nonsynonymous","Y39E S45C",2
"lib1","SARS-CoV-2","CTTATTGTCACTAGAC",2,79.63,10.61,-0.16,0.05,2.92,1.04,0,"1 nonsynonymous","G116I",1
"lib1","SARS-CoV-2","CTTATTTAGCAGTTTG",10,19.39,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","A105R N120S V173F",3
"lib1","SARS-CoV-2","CTTATTTCTTATTTAC",5,0.65,NA,NA,NA,NA,NA,NA,"stop","P82* P197T",2
"lib1","SARS-CoV-2","CTTATTTGAATTAATA",6,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77G K87D Y143C Q176R",4
"lib1","SARS-CoV-2","CTTATTTTAACAACAC",1,105.28,9.57,-1.19,0.05,2.73,1.09,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","CTTCAAAACAAAATTA",5,119.56,9.82,-0.94,0.07,2.74,1.02,0,">1 nonsynonymous","S45Y T63Q G174L",3
"lib1","SARS-CoV-2","CTTCAAAACCAGCCCG",6,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","CTTCAAAACTGAACAT",1,13.09,8.33,-2.44,0.29,1.5,1.16,0.05,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","CTTCAAAATCCGCTAC",4,50.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G V77M",2
"lib1","SARS-CoV-2","CTTCAAACAGAACACT",1,23.23,9.61,-1.15,0.11,2.69,1.1,0.01,">1 nonsynonymous","C6F K48N T63V",3
"lib1","SARS-CoV-2","CTTCAAACCTTAAGTA",7,0.07,NA,NA,NA,NA,NA,NA,"stop","S19I F62* G116P",3
"lib1","SARS-CoV-2","CTTCAAACGCAGGGTA",1,20.24,10.1,-0.67,0.1,2.59,1.06,0.01,">1 nonsynonymous","N1V S19A S43G",3
"lib1","SARS-CoV-2","CTTCAAAGCTAAGAAG",4,16.24,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F12I Y66H K94S R124C P149S G152T",6
"lib1","SARS-CoV-2","CTTCAAATCAAGAGAG",5,48.96,10,-0.76,0.09,2.58,1.02,0,">1 nonsynonymous","A42T Y91R",2
"lib1","SARS-CoV-2","CTTCAAATTTAAATTA",5,118.46,10.69,-0.07,0.05,2.93,1.04,0,"1 nonsynonymous","K114Q",1
"lib1","SARS-CoV-2","CTTCAACCGAACCCTG",1,44.01,10.23,-0.53,0.06,2.8,1.02,0,">1 nonsynonymous","D34S F160G",2
"lib1","SARS-CoV-2","CTTCAACGCGCCCAGT",6,62.29,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V115G G146V T170V",3
"lib1","SARS-CoV-2","CTTCAACGGTACTGGA",7,114.92,9.76,-1,0.08,2.62,1.05,0,">1 nonsynonymous","N107S E141S T148Q V173A",4
"lib1","SARS-CoV-2","CTTCAACGGTGTACAT",4,37.36,7.03,-3.74,0.48,1.97,1.15,0.06,">1 nonsynonymous","E10W K56S V77L A105W K128V P161I G166S",7
"lib1","SARS-CoV-2","CTTCAACTGAGCAAAA",5,51.34,7.39,-3.37,0.27,1.5,1.07,0.02,">1 nonsynonymous","Y119D Y165A",2
"lib1","SARS-CoV-2","CTTCAACTGTTAGACG",1,37.27,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y35D S45L W106S G117N",4
"lib1","SARS-CoV-2","CTTCAACTTCGGTCGT",2,53.82,10.43,-0.34,0.06,2.78,1.05,0,">1 nonsynonymous","G83H P133S",2
"lib1","SARS-CoV-2","CTTCAAGAAACGCTAA",2,33.66,10.83,0.06,0.08,2.86,1.11,0,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","CTTCAAGCGCATCTGC",2,45.76,6.67,-4.1,0.51,1.5,1.23,0.03,">1 nonsynonymous","I104S Y121P T201Q",3
"lib1","SARS-CoV-2","CTTCAAGGGCCTTCAG",5,106.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35T F47W G155H F167E",4
"lib1","SARS-CoV-2","CTTCAAGGGTCAAGCA",1,10.45,9.06,-1.7,0.27,1.5,1,0.04,">1 nonsynonymous","S41H A89I D98G N130V I138M",5
"lib1","SARS-CoV-2","CTTCAATATGCTGGGT",1,25.33,10.55,-0.21,0.06,2.97,1,0,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","CTTCAATGAGTGGAGA",2,60.63,6,-4.76,1.39,1.5,1.14,0.01,">1 nonsynonymous","Y39C K87G I104Y R124E",4
"lib1","SARS-CoV-2","CTTCAATGTATCTACA",5,52.45,10.71,-0.05,0.06,2.98,1,0,">1 nonsynonymous","R27Q N120S K198V",3
"lib1","SARS-CoV-2","CTTCAATTGAACAGAT",4,25.4,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T15I S36A F47A W106R Y165W",5
"lib1","SARS-CoV-2","CTTCACAAACTGAATG",3,97.82,8.41,-2.35,0.15,2.24,1.1,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","CTTCACAAATTCCCCT",7,31.6,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S41N I104G I142N",3
"lib1","SARS-CoV-2","CTTCACAACCAAACCC",7,1.03,NA,NA,NA,NA,NA,NA,"stop","A18T C31* Y39M R136P Q176L",5
"lib1","SARS-CoV-2","CTTCACAAGCTTAGCG",1,15.73,8.9,-1.86,0.14,2.82,1.14,0.02,">1 nonsynonymous","N157H T201A",2
"lib1","SARS-CoV-2","CTTCACACAACCAATG",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P L38V D97H Y143M G172F",5
"lib1","SARS-CoV-2","CTTCACACGAACAGTA",1,19.82,8.91,-1.86,0.18,1.86,1.14,0.02,">1 nonsynonymous","D59A L162Y",2
"lib1","SARS-CoV-2","CTTCACAGTTAAAGTA",6,64.66,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A33V N107K L162E",3
"lib1","SARS-CoV-2","CTTCACATAACTAAGT",13,56.75,9.24,-1.52,0.11,1.73,1.1,0.01,">1 nonsynonymous","A33Q L95T",2
"lib1","SARS-CoV-2","CTTCACATAGAAATGA",4,52.01,10.62,-0.14,0.07,2.84,1.09,0,">1 nonsynonymous","C61N T100K L111I G196D",4
"lib1","SARS-CoV-2","CTTCACATATATGTAC",9,165.04,10.57,-0.19,0.04,2.95,1,0,">1 nonsynonymous","Q84R G152K",2
"lib1","SARS-CoV-2","CTTCACATATGAATCT",6,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W N58H L95E E135L G174R",5
"lib1","SARS-CoV-2","CTTCACATGACTAGAT",7,125.24,9.96,-0.8,0.06,2.18,1.05,0,">1 nonsynonymous","V37T A81Y",2
"lib1","SARS-CoV-2","CTTCACCAGAAGACCA",8,88.99,10.2,-0.57,0.05,2.8,1,0,">1 nonsynonymous","V11L A33I T63W P149V",4
"lib1","SARS-CoV-2","CTTCACCCAGAATTAC",2,62.6,10.56,-0.2,0.06,2.88,1.01,0,">1 nonsynonymous","N4T N13H",2
"lib1","SARS-CoV-2","CTTCACCCGTATAAAT",2,28.25,10.67,-0.1,0.17,2.82,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","CTTCACCGGTACAATA",2,22.25,10.35,-0.41,0.08,2.91,1.02,0.01,">1 nonsynonymous","Y35P P54I D90M L122S",4
"lib1","SARS-CoV-2","CTTCACCGTAGACATC",2,0.88,NA,NA,NA,NA,NA,NA,"stop","A22L C61* L122P S139N G146Y G172V",6
"lib1","SARS-CoV-2","CTTCACGAAATTAGAA",2,36.15,9.62,-1.15,0.17,1.74,1.17,0.01,">1 nonsynonymous","C102W K199A",2
"lib1","SARS-CoV-2","CTTCACGCATAAAGTA",6,108.72,9.19,-1.57,0.07,2.75,1.13,0,">1 nonsynonymous","V52H T170G",2
"lib1","SARS-CoV-2","CTTCACGCCTTTAGAT",4,26.59,6,-4.76,2,3,1.21,0,">1 nonsynonymous","R25V N58I",2
"lib1","SARS-CoV-2","CTTCACGTCCTAAAAG",1,1.76,NA,NA,NA,NA,NA,NA,"stop","N64* W106G P149T",3
"lib1","SARS-CoV-2","CTTCACTACTATCTTA",4,51.33,10.74,-0.02,0.06,2.9,1.03,0,">1 nonsynonymous","N64R I138L",2
"lib1","SARS-CoV-2","CTTCAGAAAGAATCTT",1,80.73,10.74,-0.02,0.06,2.89,1.07,0,">1 nonsynonymous","K132Q K199T",2
"lib1","SARS-CoV-2","CTTCAGAAATTCCTTG",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L D59C F70C V180S",4
"lib1","SARS-CoV-2","CTTCAGACAAATTGCA",3,58.79,10.5,-0.26,0.05,2.93,1.01,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","CTTCAGAGAAAAGATA",2,5.78,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","T15L L95C E154R",3
"lib1","SARS-CoV-2","CTTCAGAGCTAAGCAA",9,128.48,8.74,-2.02,0.1,2.17,1.1,0,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","CTTCAGATATGAAATA",7,13.45,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","D98S T140R V182G",3
"lib1","SARS-CoV-2","CTTCAGCTCGACCGCC",2,37.31,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G117A A145V N171D",3
"lib1","SARS-CoV-2","CTTCAGCTTTTACAAA",4,55.39,10.15,-0.61,0.11,2.02,1.07,0,">1 nonsynonymous","L5Y Y50T",2
"lib1","SARS-CoV-2","CTTCAGGAATAGCTGA",9,200.37,6.39,-4.38,0.32,1.5,1.14,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","CTTCAGGACTTGCGGG",3,37.18,6.25,-4.51,0.5,1.5,1.17,0.01,">1 nonsynonymous","F12W L57F V173S",3
"lib1","SARS-CoV-2","CTTCAGGGTAATTACA",2,24.16,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","Y35A R136K G146I",3
"lib1","SARS-CoV-2","CTTCAGGTTAGTAGGA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I G117N Q168P",3
"lib1","SARS-CoV-2","CTTCAGGTTGATATCC",3,35.97,6.12,-4.64,0.32,1.57,1.06,0,">1 nonsynonymous","K114R C158V",2
"lib1","SARS-CoV-2","CTTCAGTATACGCCAG",7,78.26,10.62,-0.15,0.06,2.87,1.06,0,"1 nonsynonymous","I138L",1
"lib1","SARS-CoV-2","CTTCAGTCAAGACCAT",2,16.17,7.07,-3.69,0.3,2.07,1.07,0.01,">1 nonsynonymous","D90E F99V A105K",3
"lib1","SARS-CoV-2","CTTCAGTCGAGTCCAG",7,54.18,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L60A G86D R136T",3
"lib1","SARS-CoV-2","CTTCAGTGCCGAAACC",2,88.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N92V N157D",2
"lib1","SARS-CoV-2","CTTCATAAAATTTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110D F126Q",2
"lib1","SARS-CoV-2","CTTCATAACACTTAAT",4,43.57,6.49,-4.27,0.63,1.5,1.14,0.03,">1 nonsynonymous","G86T R127L",2
"lib1","SARS-CoV-2","CTTCATAACATATCTA",7,50.08,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","V20L N64I P82Q F99L T140K",5
"lib1","SARS-CoV-2","CTTCATACTAAAAAAT",9,100.28,6,-4.76,1.43,1.5,1.14,0.01,">1 nonsynonymous","T63S G116Q E135N Y175S",4
"lib1","SARS-CoV-2","CTTCATCATAATAAAA",8,23.36,9.14,-1.62,0.24,1.58,1.15,0.03,">1 nonsynonymous","A89K V173K",2
"lib1","SARS-CoV-2","CTTCATCCTATATACA",2,0.43,NA,NA,NA,NA,NA,NA,"stop","F12S D34S C61A K87L K94* C102T N118*",7
"lib1","SARS-CoV-2","CTTCATCCTCGGCCTA",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q I72M",2
"lib1","SARS-CoV-2","CTTCATCGGGAAATAT",1,45.8,8.88,-1.88,0.07,2.87,1.11,0,">1 nonsynonymous","S29M A42L G166T",3
"lib1","SARS-CoV-2","CTTCATGAACGTAGTA",3,53.66,10.26,-0.51,0.04,2.82,1.01,0,">1 nonsynonymous","N4M N120C T201S",3
"lib1","SARS-CoV-2","CTTCATGAGTTCATTA",1,22.12,10.78,0.02,0.1,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTCATGCTATGCTAG",2,20.53,6.43,-4.33,0.85,1.5,1.15,0.06,">1 nonsynonymous","I80K D90G W106G Q144R",4
"lib1","SARS-CoV-2","CTTCATGCTCTATGTT",2,12.27,10.66,-0.1,0.11,2.88,1.11,0.01,">1 nonsynonymous","T3C P149K",2
"lib1","SARS-CoV-2","CTTCATGTTCAATGGC",7,1.24,NA,NA,NA,NA,NA,NA,"stop","C6N S19T S45M K87* Q144G S147Y",6
"lib1","SARS-CoV-2","CTTCATTACTCTTGAA",5,1.23,NA,NA,NA,NA,NA,NA,"stop","S19V D112G P197*",3
"lib1","SARS-CoV-2","CTTCATTAGCGGTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* L60C",2
"lib1","SARS-CoV-2","CTTCATTAGTTCCTCC",1,6.51,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","Y35Q A67S Y91L Y119S K128I V173C K198W",7
"lib1","SARS-CoV-2","CTTCATTCCTCACGGT",3,23.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17L K48H T55A D75N D98Y S113H",6
"lib1","SARS-CoV-2","CTTCATTGCATACGCC",1,35.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G83F R124H R136G",3
"lib1","SARS-CoV-2","CTTCATTGTACAAGAA",1,29.98,9.84,-0.92,0.1,2.43,1.03,0.01,">1 nonsynonymous","S41D D90K N107A",3
"lib1","SARS-CoV-2","CTTCCAAAACTACAAA",2,8.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V52L F62A V71I V77D P191L",5
"lib1","SARS-CoV-2","CTTCCAAGCATAAAAC",9,134.96,9.96,-0.81,0.09,2.22,1.03,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","CTTCCACCACGATTAT",15,145.42,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C61F A67S G86Y N157L",4
"lib1","SARS-CoV-2","CTTCCACCGGGGTGAA",6,124.94,10.22,-0.54,0.05,2.93,1,0,">1 nonsynonymous","K87T R136T",2
"lib1","SARS-CoV-2","CTTCCAGCAGCGCACA",1,19.24,10.41,-0.35,0.14,2.68,1,0.02,">1 nonsynonymous","D97Y E135A",2
"lib1","SARS-CoV-2","CTTCCATAAAATTTGA",11,37.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12G S41V C61L P96K C158M",5
"lib1","SARS-CoV-2","CTTCCATCAGCTAGTT",3,20.25,6,-4.76,1.9,3,1.11,0,">1 nonsynonymous","E76S G101I K199S",3
"lib1","SARS-CoV-2","CTTCCATTCTCATGAG",6,51.07,10.11,-0.65,0.1,2.42,1.06,0,">1 nonsynonymous","N1T A105V",2
"lib1","SARS-CoV-2","CTTCCATTTTATTAAC",1,17.71,10.71,-0.05,0.04,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTCCATTTTTACTGT",5,86.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27L F126E Y165N",3
"lib1","SARS-CoV-2","CTTCCCAACGCCTACG",3,21.91,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N4G W23I S41C W106S V115S E141K",6
"lib1","SARS-CoV-2","CTTCCCACAATGGACA",5,62.4,9.42,-1.34,0.21,1.84,1.12,0.02,">1 nonsynonymous","A33K V115N S139K",3
"lib1","SARS-CoV-2","CTTCCCATCTCAATAC",1,7.71,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T85I C102G",2
"lib1","SARS-CoV-2","CTTCCCATTCTCCACA",5,47.42,7.92,-2.84,0.37,1.5,1.2,0.04,">1 nonsynonymous","A33W Y165D",2
"lib1","SARS-CoV-2","CTTCCCCAACAAATCA",4,47.58,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A18C A22T I80F R127V",4
"lib1","SARS-CoV-2","CTTCCCCACAATCGGC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","F44M N107L N118*",3
"lib1","SARS-CoV-2","CTTCCCCACACATGTC",4,73.09,10.21,-0.56,0.07,2.81,1.03,0,"1 nonsynonymous","G155I",1
"lib1","SARS-CoV-2","CTTCCCCACACCAATT",3,262.69,10.04,-0.72,0.06,2.58,1.04,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","CTTCCCCACATTTAGA",3,66.81,9.71,-1.05,0.16,1.75,1.13,0.01,">1 nonsynonymous","S36L K132F P149L V153W",4
"lib1","SARS-CoV-2","CTTCCCCACTGTATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","F44H C49* G86H K94R A190V",5
"lib1","SARS-CoV-2","CTTCCCCCGCTGGTAA",5,10.89,6.39,-4.37,0.47,1.5,1.11,0.03,">1 nonsynonymous","N1M L57P G101N K128R Y143D",5
"lib1","SARS-CoV-2","CTTCCCCTATGCAGAC",9,78.96,10.36,-0.4,0.04,2.84,1.02,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","CTTCCCGCTATACGAC",2,88.35,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S41Q S108L R124T A145N",4
"lib1","SARS-CoV-2","CTTCCCTAACGGAGTG",5,56.11,8.16,-2.61,0.23,1.5,1.13,0.02,">1 nonsynonymous","F8R G166A",2
"lib1","SARS-CoV-2","CTTCCCTACTGCCACG",1,10.89,9.04,-1.73,0.2,2.04,1.18,0.01,">1 nonsynonymous","L111S N130M Y143F S184K",4
"lib1","SARS-CoV-2","CTTCCCTTCATTAAAC",2,29.17,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6L F17E D34S T85S C150K",5
"lib1","SARS-CoV-2","CTTCCCTTCCATAAAC",3,1.75,NA,NA,NA,NA,NA,NA,"stop","A42P Y93H G174*",3
"lib1","SARS-CoV-2","CTTCCCTTTATCGCCG",3,60.3,8.78,-1.99,0.27,1.5,1.18,0.03,">1 nonsynonymous","W23Q K198S",2
"lib1","SARS-CoV-2","CTTCCGAAGATTAAAT",2,9.9,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","A14R A22M D68G P96R F160H",5
"lib1","SARS-CoV-2","CTTCCGACAGCCGTAC",1,21.54,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","W106L C158L",2
"lib1","SARS-CoV-2","CTTCCGAGCCATACAG",4,14.04,NA,NA,NA,NA,NA,NA,"stop","R27* T55L F167V L188D",4
"lib1","SARS-CoV-2","CTTCCGAGTAAAGTTA",10,92.56,10.36,-0.41,0.04,2.86,1.01,0,">1 nonsynonymous","E135N V153L F160Y",3
"lib1","SARS-CoV-2","CTTCCGATACTCAAGA",3,121.14,9.68,-1.08,0.08,2.69,1.08,0,">1 nonsynonymous","T3P K87R I138S I142Y",4
"lib1","SARS-CoV-2","CTTCCGATTTGCAGGT",6,59.12,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","D68L K132R P191L",3
"lib1","SARS-CoV-2","CTTCCGCTACTAACTG",2,19.56,10,-0.76,0.17,2.36,1.04,0.01,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","CTTCCGGAATACTGCA",1,14.09,6,-4.76,2,1.5,1.41,0.04,">1 nonsynonymous","N13I N107P P133Q S184F",4
"lib1","SARS-CoV-2","CTTCCGGACTTTACCA",1,9,6.73,-4.04,2,3,1.2,0,">1 nonsynonymous","L60V F70K V103T",3
"lib1","SARS-CoV-2","CTTCCGTAATGATGTA",2,61.22,10.72,-0.04,0.06,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTCCTAACCTGCGAT",2,6.93,7.88,-2.88,0.44,1.5,1.02,0.05,">1 nonsynonymous","G117R R136T",2
"lib1","SARS-CoV-2","CTTCCTACAATACTGC",9,162.15,10.18,-0.58,0.08,2.58,1.01,0,">1 nonsynonymous","D59Y I104T",2
"lib1","SARS-CoV-2","CTTCCTACGATGTTTA",4,30.08,7.48,-3.29,0.42,1.5,1,0.03,">1 nonsynonymous","Y35I Y91D S147T P169Q",4
"lib1","SARS-CoV-2","CTTCCTACGCTATAAC",4,18.53,7.22,-3.54,0.48,1.5,1.12,0.06,">1 nonsynonymous","C6M R136Y",2
"lib1","SARS-CoV-2","CTTCCTACGGTTGATT",5,35.6,6.63,-4.14,0.31,1.5,1.1,0.01,">1 nonsynonymous","A14L C150S",2
"lib1","SARS-CoV-2","CTTCCTAGTGAGGACT",6,108.52,8.48,-2.29,0.11,2.21,1.06,0,">1 nonsynonymous","N58S S113R",2
"lib1","SARS-CoV-2","CTTCCTAGTGCCACGC",1,25.04,10.41,-0.35,0.1,2.83,1.05,0,">1 nonsynonymous","S139L T201K",2
"lib1","SARS-CoV-2","CTTCCTATAACCCCCG",2,74.69,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F62T K87N G116S L125W G146K Q168M",6
"lib1","SARS-CoV-2","CTTCCTATCCGGGTTA",6,70.51,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N107V Y159R K198R",3
"lib1","SARS-CoV-2","CTTCCTCAGTTTGGAG",3,30.19,10.16,-0.6,0.12,2.54,1.01,0.01,">1 nonsynonymous","L57M Q84F Q168Y",3
"lib1","SARS-CoV-2","CTTCCTCATCAAATAA",14,1.77,NA,NA,NA,NA,NA,NA,"stop","V37F D59V E76K I142V Q163W K198*",6
"lib1","SARS-CoV-2","CTTCCTCCCCGCCATA",1,15.12,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","A89T N120G C158N P191N",4
"lib1","SARS-CoV-2","CTTCCTCTTCATGCTT",5,72.21,10.32,-0.44,0.07,2.95,1.03,0,">1 nonsynonymous","L5Y N64C T85G K114E",4
"lib1","SARS-CoV-2","CTTCCTGAATAACAGG",2,53.2,9.85,-0.92,0.1,2.15,1.04,0,">1 nonsynonymous","N64A Q84K T100A S139V",4
"lib1","SARS-CoV-2","CTTCCTTAGCAATAGG",1,0.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89H",1
"lib1","SARS-CoV-2","CTTCCTTGCTTTCTCC",9,80.75,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N107P E141L Y165F V181S",4
"lib1","SARS-CoV-2","CTTCCTTTGTAAACAC",6,81.57,7.87,-2.9,0.16,1.56,1.16,0.01,">1 nonsynonymous","G86Y T100L V173A",3
"lib1","SARS-CoV-2","CTTCGAAAAAAGTCGG",2,25.2,10.92,0.16,0.08,2.84,1.09,0,"1 nonsynonymous","Y178H",1
"lib1","SARS-CoV-2","CTTCGAAAAATACGAA",1,14.4,9.31,-1.45,0.14,1.88,1.1,0.01,">1 nonsynonymous","Y35N T140P",2
"lib1","SARS-CoV-2","CTTCGAAATAACGGTA",6,92.24,8.63,-2.13,0.11,2.1,1.15,0.01,">1 nonsynonymous","F44A K87Q S139N N151M",4
"lib1","SARS-CoV-2","CTTCGAAATTGAAGGT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","V37A A81F G86I V103* N120M F167K",6
"lib1","SARS-CoV-2","CTTCGAACAATGGTTC",1,25.45,10.3,-0.46,0.15,2.25,1.05,0.01,">1 nonsynonymous","N1L V52Q",2
"lib1","SARS-CoV-2","CTTCGAACCTATAACT",1,38.21,8.63,-2.14,0.13,2.31,1.08,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","CTTCGAATCACAGTAT",5,119.76,10.56,-0.21,0.05,2.88,1.06,0,"1 nonsynonymous","V65F",1
"lib1","SARS-CoV-2","CTTCGACGCCGTCTGG",13,256.87,10.74,-0.02,0.05,2.91,1.04,0,">1 nonsynonymous","N120M Y178F",2
"lib1","SARS-CoV-2","CTTCGAGCACAGGCTG",5,18.83,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10D G83V V103Y E141R",4
"lib1","SARS-CoV-2","CTTCGAGGGGTATACT",1,76.05,10.68,-0.08,0.03,2.91,1.05,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","CTTCGAGGTAATAAAT",6,35.4,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","C49K F99M V173E",3
"lib1","SARS-CoV-2","CTTCGAGTGCACCATA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","S41P L122P E141* E154K",4
"lib1","SARS-CoV-2","CTTCGATAAATCTGCG",8,1.28,NA,NA,NA,NA,NA,NA,"stop","V20G C49Y N58L E135L Q163*",5
"lib1","SARS-CoV-2","CTTCGATAATAAACGG",2,38.18,9.27,-1.49,0.33,1.5,1.24,0.03,"1 nonsynonymous","F47G",1
"lib1","SARS-CoV-2","CTTCGATATGTATACC",2,59.64,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K26D T55L V173T",3
"lib1","SARS-CoV-2","CTTCGATGAAGCAATT",1,24.47,6,-4.76,2,1.5,1.38,0.07,">1 nonsynonymous","G86A P161R",2
"lib1","SARS-CoV-2","CTTCGATGGAATCATT",8,109.25,10.64,-0.12,0.05,2.9,1.05,0,"1 nonsynonymous","K114F",1
"lib1","SARS-CoV-2","CTTCGATTACCGATAG",4,2.81,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CTTCGCAAGTTAAGCA",6,30.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A18C G51D P82L A105S",4
"lib1","SARS-CoV-2","CTTCGCCAGGTAATAT",8,48.16,9.62,-1.14,0.16,1.54,1.13,0.01,">1 nonsynonymous","L5E V77F T85A",3
"lib1","SARS-CoV-2","CTTCGCTCTTACAGCT",4,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51L G166M V180M",3
"lib1","SARS-CoV-2","CTTCGGATTAAAACTA",1,13.28,10.31,-0.45,0.14,2.45,1.1,0.01,">1 nonsynonymous","N1E S184E G196L",3
"lib1","SARS-CoV-2","CTTCGGCACGCGACTT",8,22.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5W I88R W106M Q163Y F167V",5
"lib1","SARS-CoV-2","CTTCGGCCGATGATAG",1,22.53,9.65,-1.11,0.22,1.5,1,0.02,"1 nonsynonymous","D68E",1
"lib1","SARS-CoV-2","CTTCGGCTTGTTTAAT",2,30.76,9.74,-1.02,0.12,2.12,1.08,0.01,">1 nonsynonymous","A33H P96D",2
"lib1","SARS-CoV-2","CTTCGGTCTGAAGTTC",3,42.46,6.02,-4.74,1.64,1.5,1.25,0.04,">1 nonsynonymous","I28T S43T C61Y T63Y P96T I104E P149R F167S",8
"lib1","SARS-CoV-2","CTTCGGTGCAAATCAA",4,76.47,10.2,-0.57,0.06,2.8,1,0,">1 nonsynonymous","A42S G83S D97I",3
"lib1","SARS-CoV-2","CTTCGTCAAACTACCG",1,11.04,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C6L I80R",2
"lib1","SARS-CoV-2","CTTCGTCGAGCTAGTT",6,54.43,6,-4.76,0.92,3,1.12,0,">1 nonsynonymous","V11S V103W N151D H189R",4
"lib1","SARS-CoV-2","CTTCGTTAAGATGAGA",5,53.74,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","F167R",1
"lib1","SARS-CoV-2","CTTCGTTATGCCCTAA",1,44.83,10.64,-0.12,0.08,2.92,1,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","CTTCGTTCATCTCAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","I2V F47* L122R R127T D137A",5
"lib1","SARS-CoV-2","CTTCGTTGATATGAGG",8,139.96,10.72,-0.04,0.04,2.95,1.02,0,"1 nonsynonymous","S43W",1
"lib1","SARS-CoV-2","CTTCGTTGATCAAAAA",9,64.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6T T85C N92L E135W",4
"lib1","SARS-CoV-2","CTTCTAAACCCAGACT",5,0.47,NA,NA,NA,NA,NA,NA,"stop","V115* P169N",2
"lib1","SARS-CoV-2","CTTCTAAACGCTTTTT",9,89.42,10.72,-0.04,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTCTAAATTTTTAAC",5,9.99,8.85,-1.92,0.25,1.5,1,0.04,">1 nonsynonymous","P149T L183T",2
"lib1","SARS-CoV-2","CTTCTAAGATCTACGA",1,5.63,10.57,-0.2,0.19,3,1,0,"1 nonsynonymous","F156A",1
"lib1","SARS-CoV-2","CTTCTAATCACCAACG",5,49.36,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T100W V103L V173M",3
"lib1","SARS-CoV-2","CTTCTAATCAGTCAAG",11,4.39,NA,NA,NA,NA,NA,NA,"stop","S36D Y119* F156S",3
"lib1","SARS-CoV-2","CTTCTACACGACCACG",7,66.76,10.75,-0.02,0.06,2.94,1.03,0,">1 nonsynonymous","I138S T201S",2
"lib1","SARS-CoV-2","CTTCTACCAAATCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* S129K F167Y",3
"lib1","SARS-CoV-2","CTTCTACCACCCCGCC",14,435.69,8.41,-2.35,0.11,2.77,1.05,0,">1 nonsynonymous","T63N Y175S",2
"lib1","SARS-CoV-2","CTTCTACCCGTGGCTA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","G9T T100* S129G Q163L",4
"lib1","SARS-CoV-2","CTTCTACGCGTTATCA",9,19.99,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","G83V F99T T201G",3
"lib1","SARS-CoV-2","CTTCTACGGCAACGTA",5,57.29,11.02,0.25,0.1,2.93,1.01,0,"1 nonsynonymous","N171W",1
"lib1","SARS-CoV-2","CTTCTACGTATTATCA",2,91.4,10.2,-0.56,0.07,2.76,1.05,0,"1 nonsynonymous","N24L",1
"lib1","SARS-CoV-2","CTTCTACTAAGACAGA",5,19.92,6,-4.76,2,3,1.19,0.03,">1 nonsynonymous","D34W V71W I104S L125S",4
"lib1","SARS-CoV-2","CTTCTACTATGCTTCA",1,7.26,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G86I F160P",2
"lib1","SARS-CoV-2","CTTCTACTGGTTGGAT",2,43.04,10.86,0.09,0.09,2.92,1,0,">1 nonsynonymous","V32R P149Q",2
"lib1","SARS-CoV-2","CTTCTAGACCGCCTGA",3,55.57,10.58,-0.18,0.06,2.9,1.08,0,">1 nonsynonymous","T46S T63Y",2
"lib1","SARS-CoV-2","CTTCTAGCGTGTGTTT",9,27.11,6,-4.76,1.3,1.5,1.07,0.01,">1 nonsynonymous","Y35C P54V G86S Y119K",4
"lib1","SARS-CoV-2","CTTCTAGCTCTACTCT",2,34.52,7.03,-3.73,0.53,1.5,1.27,0.06,">1 nonsynonymous","K26N V77F N151S",3
"lib1","SARS-CoV-2","CTTCTAGCTTTCCACC",10,1.33,NA,NA,NA,NA,NA,NA,"stop","F12G I88F K114* Y119T",4
"lib1","SARS-CoV-2","CTTCTAGTCTTTATAT",2,7.91,NA,NA,NA,NA,NA,NA,"stop","A42L A105F K114T F156*",4
"lib1","SARS-CoV-2","CTTCTATACCTAGTAT",3,23.52,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y50S W106R G116D Y121G P149N N157T",6
"lib1","SARS-CoV-2","CTTCTATACGGATCCA",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46M E76V",2
"lib1","SARS-CoV-2","CTTCTATAGAGTTGTT",1,12.72,8.45,-2.31,0.26,2.23,1.14,0.03,">1 nonsynonymous","E10L K56L T170C",3
"lib1","SARS-CoV-2","CTTCTATAGTTCTGAA",5,124.81,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P54D N157F P169E T201G",4
"lib1","SARS-CoV-2","CTTCTATATGCCAAAG",3,58.28,10,-0.77,0.09,2.48,1.07,0,">1 nonsynonymous","L5E S41T L60K L162V C195V",5
"lib1","SARS-CoV-2","CTTCTATATTAAGCTA",7,5.82,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2V A33K P54N G74D A89D Y175D",6
"lib1","SARS-CoV-2","CTTCTATCCAAATCAA",1,31.45,9.23,-1.53,0.25,1.53,1.12,0.03,"1 nonsynonymous","F17K",1
"lib1","SARS-CoV-2","CTTCTATCTTATGACT",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R N107D V180F",3
"lib1","SARS-CoV-2","CTTCTATTGGAGTCCT",6,28.68,7.03,-3.74,0.6,1.5,1.29,0.07,">1 nonsynonymous","T15F A81T K94T E141M",4
"lib1","SARS-CoV-2","CTTCTCAAAAAGGTCC",7,38.54,6.09,-4.67,0.91,1.5,1.13,0.02,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","CTTCTCAATAAATAAT",5,98.51,10.39,-0.37,0.04,2.89,1.03,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","CTTCTCACACTTATGT",1,11.72,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","L38S S43C D112R",3
"lib1","SARS-CoV-2","CTTCTCAGTTCCCTAT",7,83.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28T I72V L95W P133V V153R",5
"lib1","SARS-CoV-2","CTTCTCATAAAAAGAT",5,5.32,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G74P R127T Y143T",3
"lib1","SARS-CoV-2","CTTCTCCACAAAAAGT",1,27.6,9.88,-0.88,0.17,2.31,1.03,0.01,">1 nonsynonymous","C31F F47L",2
"lib1","SARS-CoV-2","CTTCTCCACACCTGCT",3,49.76,10.07,-0.7,0.09,2.72,1.1,0,">1 nonsynonymous","A33Q N120C",2
"lib1","SARS-CoV-2","CTTCTCCCCTTTGTGT",5,7.77,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","I28L N92I T140I S164L N171W",5
"lib1","SARS-CoV-2","CTTCTCCGAATCGACC",1,7.88,10.41,-0.35,0.21,2.93,1,0.01,">1 nonsynonymous","E10R Q84K",2
"lib1","SARS-CoV-2","CTTCTCCTAAGATTAG",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y Y123S L183E",3
"lib1","SARS-CoV-2","CTTCTCCTCCAAAGCA",1,28.22,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P7Y R25V K56L G155V A190W",5
"lib1","SARS-CoV-2","CTTCTCGATCGCTCTT",1,3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","CTTCTCTCCATCATGT",9,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S36K G174T",3
"lib1","SARS-CoV-2","CTTCTCTGCGCCCCAC",2,49.04,10.01,-0.75,0.1,2.45,1.06,0,">1 nonsynonymous","C61T P133V",2
"lib1","SARS-CoV-2","CTTCTCTTACTTAACA",3,1.45,NA,NA,NA,NA,NA,NA,"stop","D98R R127* P149S F160V",4
"lib1","SARS-CoV-2","CTTCTCTTCGAAAGTT",1,51.2,9.71,-1.06,0.13,1.94,1.15,0.01,">1 nonsynonymous","D98A V115Q F134R",3
"lib1","SARS-CoV-2","CTTCTCTTTGAAACAA",4,51.95,10.25,-0.52,0.07,2.71,1.04,0,">1 nonsynonymous","T3G C49W",2
"lib1","SARS-CoV-2","CTTCTCTTTGGATTCA",3,21.79,9.89,-0.87,0.14,2.17,1.04,0.01,">1 nonsynonymous","A14T A81K A190P",3
"lib1","SARS-CoV-2","CTTCTGAACTACCATG",1,37.45,10.23,-0.53,0.06,2.89,1,0,">1 nonsynonymous","C6G A190S T201Y",3
"lib1","SARS-CoV-2","CTTCTGAAGCAAGAAC",4,6.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7N N13D V52S W106T",4
"lib1","SARS-CoV-2","CTTCTGACACCATATG",4,27.66,10.71,-0.06,0.08,2.79,1.15,0,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","CTTCTGAGACTGCGCA",2,27.41,10.71,-0.05,0.09,2.89,1,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","CTTCTGAGCAACCTAC",2,16.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N30D V37F G101D F156V",4
"lib1","SARS-CoV-2","CTTCTGATATGAAAAA",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S N13R C49Y N64S K87R I142G",6
"lib1","SARS-CoV-2","CTTCTGCATAACAGCT",9,49.32,6,-4.76,1.11,1.5,1.17,0.01,">1 nonsynonymous","K94Y A105V",2
"lib1","SARS-CoV-2","CTTCTGCTCTCCCTCC",5,66.88,10.29,-0.48,0.07,2.76,1,0,">1 nonsynonymous","A22S Q84Y",2
"lib1","SARS-CoV-2","CTTCTGCTTGTTCTTA",3,25.01,10.28,-0.49,0.09,2.86,1.01,0,">1 nonsynonymous","I2V S36R D90R K132D",4
"lib1","SARS-CoV-2","CTTCTGGAAATAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55H V77* Q144* P169L Q176T V180Y K198C",7
"lib1","SARS-CoV-2","CTTCTGGAACAAGCAA",2,24.61,6,-4.76,2,1.5,1.23,0.05,"1 nonsynonymous","F167C",1
"lib1","SARS-CoV-2","CTTCTGGGAGCACAAA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","S36E C61A S113*",3
"lib1","SARS-CoV-2","CTTCTGTTACTATAGA",4,37.31,10.58,-0.18,0.08,2.82,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTCTTAAAAATCGAC",4,54.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37I Q84W Y165E",3
"lib1","SARS-CoV-2","CTTCTTAAAGTAAGAG",7,16.3,6,-4.76,2,3,1.07,0,">1 nonsynonymous","S41C W106S G152S S184L",4
"lib1","SARS-CoV-2","CTTCTTAAATGGCTTC",4,30.32,7.86,-2.91,0.3,1.5,1.16,0.03,">1 nonsynonymous","N4V G51I E141S",3
"lib1","SARS-CoV-2","CTTCTTACCTAGAGAG",2,15.28,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","E10C T63L F99V V181S",4
"lib1","SARS-CoV-2","CTTCTTATAACCATCA",2,99.53,9.18,-1.58,0.08,2.62,1.14,0,">1 nonsynonymous","S41I N120T",2
"lib1","SARS-CoV-2","CTTCTTATAACGTTCG",13,240.78,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28Q N109A T170R Y178V",4
"lib1","SARS-CoV-2","CTTCTTATAATGCAAT",1,38.04,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y119N Q176P",2
"lib1","SARS-CoV-2","CTTCTTATTTAAAATT",2,23.95,6,-4.76,1.2,1.5,1.08,0.01,">1 nonsynonymous","V37Y T55G V103Q",3
"lib1","SARS-CoV-2","CTTCTTCCACAGGAGG",9,197.24,10.67,-0.1,0.06,2.89,1.05,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","CTTCTTCGGAATCGAA",4,13.55,9.92,-0.85,0.18,2.55,1,0.02,">1 nonsynonymous","P7T F44T L60R",3
"lib1","SARS-CoV-2","CTTCTTCGTATTACAG",7,3.61,NA,NA,NA,NA,NA,NA,"stop","A14V L57* S108M",3
"lib1","SARS-CoV-2","CTTCTTCTAACCAGCA",3,11.46,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","V37Q D98N N107P K114E Y143T",5
"lib1","SARS-CoV-2","CTTCTTCTACATATGC",4,53.38,10.89,0.12,0.1,2.91,1.08,0,"1 nonsynonymous","V153R",1
"lib1","SARS-CoV-2","CTTCTTGAAGGCGTAC",5,47.47,8.26,-2.5,0.31,1.55,1.17,0.03,">1 nonsynonymous","V20L T63S",2
"lib1","SARS-CoV-2","CTTCTTGTCATTAAAT",4,29.75,7.46,-3.3,0.31,1.5,1.12,0.03,">1 nonsynonymous","L5D L57Y N151F N157Q",4
"lib1","SARS-CoV-2","CTTCTTGTTACAACCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19I N109L Q176L S200T",4
"lib1","SARS-CoV-2","CTTCTTTCAGGGTTTG",3,38.19,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","F8S Y91S N157G Q168D",4
"lib1","SARS-CoV-2","CTTCTTTGCCATTAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184C",1
"lib1","SARS-CoV-2","CTTCTTTGCTATAAAT",1,14.17,10.02,-0.75,0.18,2.64,1.18,0.02,">1 nonsynonymous","K87T S147C",2
"lib1","SARS-CoV-2","CTTCTTTTAAGAGGGT",1,29.82,10.78,0.02,0.1,2.73,1.21,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTCTTTTAGGAATAG",2,21.64,6.31,-4.45,0.45,1.86,1.22,0.01,">1 nonsynonymous","L60R D112T T148H",3
"lib1","SARS-CoV-2","CTTGAAAAATATGGGA",1,21.75,9.58,-1.18,0.3,1.5,1.07,0.04,">1 nonsynonymous","N110R R127Q",2
"lib1","SARS-CoV-2","CTTGAAAAATCAAAAC",2,23.71,10.44,-0.32,0.07,2.91,1,0,">1 nonsynonymous","N40Y P149T",2
"lib1","SARS-CoV-2","CTTGAAAGAACCAGAA",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30Y Y50C C102W W106C Y159F F167L",6
"lib1","SARS-CoV-2","CTTGAAAGTACGCATT",10,115.37,10.74,-0.03,0.07,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTGAAATGACCCCCG",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46W Y121D E141R G196N",4
"lib1","SARS-CoV-2","CTTGAAATTAGCACAA",1,12.77,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","V11S F44P V71G D98C C158H Q176P Y178V",7
"lib1","SARS-CoV-2","CTTGAAATTATGCTGG",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32M Q84E V103Q N118T Q144P G166V",6
"lib1","SARS-CoV-2","CTTGAACAAAGCACAT",1,40.73,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","V37Y D59A L95R G101T S113G T140A",6
"lib1","SARS-CoV-2","CTTGAACAAGGTGACC",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N S19P I138L",3
"lib1","SARS-CoV-2","CTTGAACACCTATCTT",3,53.38,8.7,-2.07,0.3,1.5,1,0.04,">1 nonsynonymous","R27S T55E P82M N120S A190D",5
"lib1","SARS-CoV-2","CTTGAACCTTCGAGAG",3,38.47,10.49,-0.27,0.05,2.82,1.1,0,"1 nonsynonymous","Q168Y",1
"lib1","SARS-CoV-2","CTTGAACTACTAGAAA",3,14.75,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","L122Y T170I Y178N F185A",4
"lib1","SARS-CoV-2","CTTGAAGAATATATCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16M T55D",2
"lib1","SARS-CoV-2","CTTGAAGCGATGGTAA",10,64.96,8.82,-1.94,0.27,1.5,1,0.03,">1 nonsynonymous","W23F V37G I104A I138S V173F",5
"lib1","SARS-CoV-2","CTTGAAGGCGAGTTTT",1,47.87,10.52,-0.24,0.07,2.9,1.02,0,"1 nonsynonymous","P7M",1
"lib1","SARS-CoV-2","CTTGAAGTACACGAAT",9,99.75,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N4S F8L P54T K87A T100P S164W",6
"lib1","SARS-CoV-2","CTTGAAGTTCATACAA",11,266.27,10.43,-0.33,0.04,2.9,1,0,">1 nonsynonymous","C61S D90T I138T",3
"lib1","SARS-CoV-2","CTTGAATAATACAACT",2,28.82,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Q144K G172S Y178T",3
"lib1","SARS-CoV-2","CTTGAATAATACCACG",2,50.51,10.51,-0.25,0.07,2.82,1.06,0,"1 nonsynonymous","T148G",1
"lib1","SARS-CoV-2","CTTGAATACAATCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S53K S139A Y165V Q168* P177F",5
"lib1","SARS-CoV-2","CTTGAATACTGATTAC",1,40.61,10.88,0.12,0.05,2.96,1.02,0,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","CTTGAATGAAAAACCG",1,21.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37S I72D T85P Y93G",4
"lib1","SARS-CoV-2","CTTGAATTGTTATTAT",4,45.23,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K87V K114L D137N T140Y E154L R179W",6
"lib1","SARS-CoV-2","CTTGACAACACACGAA",4,77.26,10.74,-0.03,0.07,2.89,1.09,0,">1 nonsynonymous","R16N F160T",2
"lib1","SARS-CoV-2","CTTGACAACTTACATT",2,15.59,10.02,-0.74,0.17,1.91,1.05,0.02,">1 nonsynonymous","T63C E141P L183F",3
"lib1","SARS-CoV-2","CTTGACAAGGGGTGAA",6,100.39,6.79,-3.97,0.32,1.5,1.19,0.02,">1 nonsynonymous","F12P E154Y",2
"lib1","SARS-CoV-2","CTTGACCAAAGTTAGA",1,50.98,6,-4.76,1.59,1.5,1.13,0.01,">1 nonsynonymous","C61K I138L L162R T170Y S200L",5
"lib1","SARS-CoV-2","CTTGACCCAGGAACTA",2,44.02,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y21N C49S G166Q H189R",4
"lib1","SARS-CoV-2","CTTGACCCATAAAACC",2,31.96,9.13,-1.63,0.25,1.5,1.07,0.03,">1 nonsynonymous","Y35V S45R E141W P149Q",4
"lib1","SARS-CoV-2","CTTGACCCCGTGCATC",3,2.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","CTTGACCCCTATTCAG",9,80.37,9.32,-1.45,0.16,1.77,1.16,0.01,"1 nonsynonymous","Y50R",1
"lib1","SARS-CoV-2","CTTGACCGAAAAGATA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","G9W P82Y P133* T170Q K198L",5
"lib1","SARS-CoV-2","CTTGACCGTAAAACCA",3,37.12,10.18,-0.58,0.06,2.92,1.01,0,">1 nonsynonymous","L122Q G152I S184L",3
"lib1","SARS-CoV-2","CTTGACCTACACATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9R V52I Y91L E135D F156S Q168*",6
"lib1","SARS-CoV-2","CTTGACGAGTTTCTTC",5,90.02,6,-4.76,1.31,1.5,1.19,0.02,">1 nonsynonymous","K87S Y165S",2
"lib1","SARS-CoV-2","CTTGACGGATGATTAT",2,38.74,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A105E P133I G166V",3
"lib1","SARS-CoV-2","CTTGACGTAAACTACG",9,50.92,8.81,-1.95,0.17,1.69,1.15,0.01,">1 nonsynonymous","A18N N92C",2
"lib1","SARS-CoV-2","CTTGACGTAATAAAGC",8,184.88,10.39,-0.37,0.04,2.9,1.02,0,">1 nonsynonymous","A22F F160A",2
"lib1","SARS-CoV-2","CTTGACGTTAATCATA",1,21.7,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","C6L N107L T201M",3
"lib1","SARS-CoV-2","CTTGACGTTGATGCCG",6,29.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S43P S113F G146Q",3
"lib1","SARS-CoV-2","CTTGACTAGATATAGA",1,33.58,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","S45E G86I A105T D112N T148P S164T",6
"lib1","SARS-CoV-2","CTTGACTATTCCCCAG",7,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L D98F",2
"lib1","SARS-CoV-2","CTTGACTCTCGATAAC",5,72.35,10.65,-0.11,0.05,2.9,1.03,0,">1 nonsynonymous","N1A C61G",2
"lib1","SARS-CoV-2","CTTGACTGATGACTAA",2,62.29,6.29,-4.47,0.82,1.5,1.24,0.02,">1 nonsynonymous","I2N K114W S129A A145D P169F",5
"lib1","SARS-CoV-2","CTTGACTTAAAAGTCA",1,38.44,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","S36W L95R L131S",3
"lib1","SARS-CoV-2","CTTGACTTATCCACTC",2,7.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Q84I T100P D137R P169Q",4
"lib1","SARS-CoV-2","CTTGAGAACAAGGTTT",7,78.23,8.44,-2.32,0.32,1.5,1.03,0.04,">1 nonsynonymous","A14V N40P T46S D90R T140R S184F",6
"lib1","SARS-CoV-2","CTTGAGAACAGAAACC",3,68.05,10.43,-0.34,0.04,2.95,1.01,0,">1 nonsynonymous","P7R S36D C61I K132M",4
"lib1","SARS-CoV-2","CTTGAGAAGTGTGGAC",3,17.23,10.6,-0.17,0.07,2.9,1.03,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","CTTGAGACAATCTAAG",1,36.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10G C31R S41E C49V N58L Y66V G101S N107L",8
"lib1","SARS-CoV-2","CTTGAGACATAAGTGG",8,39.85,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","D34T K94P",2
"lib1","SARS-CoV-2","CTTGAGACCAGGACTA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5V V37* T100I F167L",4
"lib1","SARS-CoV-2","CTTGAGCACTGACCTC",1,85.81,9.58,-1.19,0.11,2.44,1.09,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","CTTGAGCATGACTTGA",3,42.75,10.1,-0.66,0.14,2.48,1.01,0.01,">1 nonsynonymous","L38Y D90A S200K",3
"lib1","SARS-CoV-2","CTTGAGCCCAGCTGCC",5,59.07,10.83,0.06,0.05,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTGAGGTTAAACAAT",1,51.97,10.73,-0.03,0.06,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGATAAACAATTGT",1,10.44,10.12,-0.64,0.1,2.82,1.09,0,">1 nonsynonymous","L60W K87S",2
"lib1","SARS-CoV-2","CTTGATAATCGTAACG",11,126.96,10.78,0.02,0.05,2.84,1.09,0,">1 nonsynonymous","I2G D59E V65M",3
"lib1","SARS-CoV-2","CTTGATACAATGGTGG",1,6.88,10.93,0.16,0.07,2.95,1,0,">1 nonsynonymous","S41I L187D P197L",3
"lib1","SARS-CoV-2","CTTGATACAGAAATCA",4,102.96,10.07,-0.69,0.08,2.32,1.06,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","CTTGATACTGGGTAGC",4,72.15,9.84,-0.93,0.13,1.76,1.08,0.01,">1 nonsynonymous","V52T F62T D98F N151T",4
"lib1","SARS-CoV-2","CTTGATAGTATTAACT",1,21.23,10.88,0.12,0.11,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGATATACCCCCAA",6,117.08,10.16,-0.61,0.07,2.68,1,0,">1 nonsynonymous","T3S N24L",2
"lib1","SARS-CoV-2","CTTGATATATTATAAA",12,195.17,9.93,-0.83,0.05,2.87,1.03,0,">1 nonsynonymous","K56G I142W",2
"lib1","SARS-CoV-2","CTTGATATGCGACTAG",3,67.82,9.96,-0.8,0.11,2.1,1.05,0,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","CTTGATATTCTCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G N107L Q168T",3
"lib1","SARS-CoV-2","CTTGATCGAACCATGC",1,28.86,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N64P G86V D90T C195F",4
"lib1","SARS-CoV-2","CTTGATCTCGAGACCA",3,16.69,6,-4.76,2,3,1.14,0,">1 nonsynonymous","W106V Y119L G174R",3
"lib1","SARS-CoV-2","CTTGATGAACAACGCT",1,80.02,10.69,-0.07,0.05,2.97,1.02,0,">1 nonsynonymous","K48V T85H P149N",3
"lib1","SARS-CoV-2","CTTGATGACTTATATA",8,1306.62,10.63,-0.13,0.03,2.91,1.04,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","CTTGATGGGCTGTTAG",4,12.82,8.42,-2.35,0.21,1.5,1.03,0.04,"1 nonsynonymous","G86P",1
"lib1","SARS-CoV-2","CTTGATGGGTGTATTG",3,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A A33N Y143N S147I Q168S",5
"lib1","SARS-CoV-2","CTTGATTACGAAATAT",1,19.34,10.78,0.02,0.09,3,1.02,0,">1 nonsynonymous","A42V L60V",2
"lib1","SARS-CoV-2","CTTGATTCAAGCGATA",4,60.15,10.88,0.12,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGATTGAATAAACC",1,12.1,7.2,-3.56,0.3,1.5,1.11,0.02,">1 nonsynonymous","L5E I28S R73K F134N",4
"lib1","SARS-CoV-2","CTTGATTGCATCGTCC",4,6.32,6,-4.76,2,3,1.03,0,">1 nonsynonymous","V103P R127P P161L",3
"lib1","SARS-CoV-2","CTTGATTTCCAACGCG",3,7.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82Q R124S S147F",3
"lib1","SARS-CoV-2","CTTGCAAAACCTTAGA",4,4.01,NA,NA,NA,NA,NA,NA,"stop","L95D Y121*",2
"lib1","SARS-CoV-2","CTTGCAAACACGGTCC",12,394.92,10.78,0.01,0.06,2.93,1.05,0,"1 nonsynonymous","L188Q",1
"lib1","SARS-CoV-2","CTTGCAAGAAAGTCAC",13,1.38,NA,NA,NA,NA,NA,NA,"stop","R27G D112N G155*",3
"lib1","SARS-CoV-2","CTTGCAATATGGAGTA",1,58.72,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R16H Y50G R124P T140G",4
"lib1","SARS-CoV-2","CTTGCAATCAAGATGA",1,61.58,7.21,-3.56,0.35,1.5,1.1,0.03,">1 nonsynonymous","N107Y L188M T201Q",3
"lib1","SARS-CoV-2","CTTGCAATCTAGACGC",12,119.62,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K87D I142F Q176S",3
"lib1","SARS-CoV-2","CTTGCACACATGCCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W L60I A89Y",3
"lib1","SARS-CoV-2","CTTGCACATATGGAAG",1,8.04,11.05,0.29,0.1,2.99,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGCACCTAGATCGC",3,9.56,8.1,-2.67,0.32,1.67,1.03,0.08,">1 nonsynonymous","E10H W23F Y91V C102Y K198M",5
"lib1","SARS-CoV-2","CTTGCAGATAGTATTT",2,2.64,NA,NA,NA,NA,NA,NA,"stop","L57K A89T G174*",3
"lib1","SARS-CoV-2","CTTGCAGTAGGTTCGG",4,57.47,10.87,0.1,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGCATAGGTTTAAA",7,95.33,8.51,-2.25,0.12,1.68,1.14,0,">1 nonsynonymous","L38T E135W",2
"lib1","SARS-CoV-2","CTTGCATCACCTACCA",1,89.31,10.86,0.1,0.04,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTGCATCCAACAACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","CTTGCATGTTGATGCC",4,1.11,NA,NA,NA,NA,NA,NA,"stop","A33R C102R S139* N157H",4
"lib1","SARS-CoV-2","CTTGCCAAACATCGAA",4,19.42,8.88,-1.89,0.08,2.76,1.17,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","CTTGCCAAGCTAAAAA",1,9.96,7.72,-3.05,0.36,1.5,1.01,0.05,">1 nonsynonymous","R16S L95R V180I",3
"lib1","SARS-CoV-2","CTTGCCAATAAAGGGA",14,115.27,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","D34L R127S F167M",3
"lib1","SARS-CoV-2","CTTGCCATCAATGATC",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I G101S",2
"lib1","SARS-CoV-2","CTTGCCCATTTCCGTC",2,31.69,9.18,-1.58,0.22,1.5,1.06,0.02,">1 nonsynonymous","L38T D97Y L122I S129N",4
"lib1","SARS-CoV-2","CTTGCCGACACTCCGA",6,55.04,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N40I F47G F99Q",3
"lib1","SARS-CoV-2","CTTGCCGATTCGCGCC",4,1.51,NA,NA,NA,NA,NA,NA,"stop","C61T A89Q G117* S129T V173P",5
"lib1","SARS-CoV-2","CTTGCCTAACAATTAA",4,35.99,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10F S36L A105D V115M F167Y",5
"lib1","SARS-CoV-2","CTTGCGATACCATATT",3,51.59,9.43,-1.33,0.15,1.54,1.15,0.01,">1 nonsynonymous","G9S V77K L122V",3
"lib1","SARS-CoV-2","CTTGCGATATGCTTAC",1,15.95,10.28,-0.48,0.17,2.65,1.09,0.01,">1 nonsynonymous","T3D K114Q Y123S N130S",4
"lib1","SARS-CoV-2","CTTGCGATTAACAGAT",6,105.94,10.63,-0.13,0.05,2.91,1.05,0,">1 nonsynonymous","N64A D97C V173Q",3
"lib1","SARS-CoV-2","CTTGCGATTGGCTTGG",2,14.97,6,-4.76,1.65,3,1.06,0,">1 nonsynonymous","V37Q G51R P96M K128V G174V",5
"lib1","SARS-CoV-2","CTTGCGGGAAATTGGC",5,21.88,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S69R A105R",2
"lib1","SARS-CoV-2","CTTGCGTCCAAAAATG",5,80.15,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35T L60H G166L R179F",4
"lib1","SARS-CoV-2","CTTGCGTTGGCCCAAA",10,3.31,NA,NA,NA,NA,NA,NA,"stop","G101N L122* K128C",3
"lib1","SARS-CoV-2","CTTGCTAAAATATGTA",1,17.62,10.75,-0.02,0.06,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTGCTAAACCTCAAA",2,14.46,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R16S P96V Y123A F167L",4
"lib1","SARS-CoV-2","CTTGCTAAATCAAGAC",13,309.31,10.75,-0.01,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGCTAGACCGAACC",2,22.8,6.45,-4.32,0.55,1.5,1.13,0.03,">1 nonsynonymous","A33E P82K K114V K128V I138L",5
"lib1","SARS-CoV-2","CTTGCTATAGGATACA",4,31.41,9.48,-1.28,0.16,1.63,1.11,0.01,">1 nonsynonymous","V52C A67Y D97V",3
"lib1","SARS-CoV-2","CTTGCTATGAATAAAA",8,2.81,NA,NA,NA,NA,NA,NA,"stop","P7L S69M L122C P177*",4
"lib1","SARS-CoV-2","CTTGCTCATTTCTCGA",2,26.07,9.73,-1.03,0.23,1.79,1.02,0.02,">1 nonsynonymous","F17Q K114T",2
"lib1","SARS-CoV-2","CTTGCTGAATCATGAT",4,30.58,10.8,0.04,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGCTTCCTGTGTAC",8,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G N40D L122P",3
"lib1","SARS-CoV-2","CTTGCTTGCACTTACT",5,0.78,NA,NA,NA,NA,NA,NA,"stop","E10S R25T Y39*",3
"lib1","SARS-CoV-2","CTTGGAAATAGGAAAA",7,4.1,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","CTTGGAAATTTCGATT",1,21.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L Y159C",2
"lib1","SARS-CoV-2","CTTGGAACAAGTAGAT",2,21.39,10.05,-0.71,0.08,2.84,1.02,0,">1 nonsynonymous","K87F A145I A192W",3
"lib1","SARS-CoV-2","CTTGGAACAATAGGAA",4,49.53,9.72,-1.05,0.14,2.11,1.09,0.01,">1 nonsynonymous","N1L D90S D97Y F156V",4
"lib1","SARS-CoV-2","CTTGGAAGTCAAGTTG",3,122.89,10.69,-0.08,0.06,2.94,1.03,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","CTTGGAATTATCTATA",7,106.61,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A105E N118P",2
"lib1","SARS-CoV-2","CTTGGACAGAATAATT",1,7.69,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F17R F44C A81I P149Y",4
"lib1","SARS-CoV-2","CTTGGACGAAACTTTG",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V D112H",2
"lib1","SARS-CoV-2","CTTGGACTATAAACGA",3,51.27,6.01,-4.76,0.83,1.5,1.16,0.01,">1 nonsynonymous","Y39K G51S P96L C102R S164V",5
"lib1","SARS-CoV-2","CTTGGACTCAATAAAA",2,5.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D D112G",2
"lib1","SARS-CoV-2","CTTGGAGGTTGGACGC",6,1.33,NA,NA,NA,NA,NA,NA,"stop","S36I D90S F99N N110* K198T",5
"lib1","SARS-CoV-2","CTTGGATGGCTGAAGG",1,5.09,NA,NA,NA,NA,NA,NA,"stop","P7A F126S P149*",3
"lib1","SARS-CoV-2","CTTGGCAAATTTAATC",2,24.31,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A81V Q84L W106P Y123V N157Y",5
"lib1","SARS-CoV-2","CTTGGCACAAAATCCA",4,65.71,8.86,-1.9,0.09,2.76,1.1,0,">1 nonsynonymous","D59N N109L Y119S P149T",4
"lib1","SARS-CoV-2","CTTGGCACAAGCACTA",12,62.89,6.31,-4.45,0.54,1.5,1.21,0.02,">1 nonsynonymous","A105D S139Y Y178N",3
"lib1","SARS-CoV-2","CTTGGCAGACAACCCT",2,31.41,10.61,-0.15,0.07,2.93,1.01,0,">1 nonsynonymous","S41L V173R",2
"lib1","SARS-CoV-2","CTTGGCGAAACCTCCT",1,20.23,6.2,-4.56,0.8,1.5,1.05,0.03,">1 nonsynonymous","Y39L Y50L Y93L C102H",4
"lib1","SARS-CoV-2","CTTGGCGGTCATCGTA",9,160.39,10.72,-0.05,0.05,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTGGCGTCAAACAAA",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36K C49D V77L Y178F",4
"lib1","SARS-CoV-2","CTTGGGAACTAACTAA",3,15.04,10.16,-0.61,0.11,2.93,1.06,0.01,">1 nonsynonymous","T3A Y119R",2
"lib1","SARS-CoV-2","CTTGGGCACAATAGTC",7,100.48,9.52,-1.24,0.1,2.7,1.04,0,">1 nonsynonymous","N64K G146Q",2
"lib1","SARS-CoV-2","CTTGGGCCAATAGTCA",7,252.02,10.16,-0.61,0.07,2.7,1.02,0,">1 nonsynonymous","N40P T140P",2
"lib1","SARS-CoV-2","CTTGGGCTTTACCGAT",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Y C49G Q176S",3
"lib1","SARS-CoV-2","CTTGGGGATCAGGACC",3,24.21,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","CTTGGTAAGATCAAGC",8,94.61,10.58,-0.18,0.04,2.98,1,0,"1 nonsynonymous","P7C",1
"lib1","SARS-CoV-2","CTTGGTAGCCTGGAAA",1,28.16,10.96,0.19,0.13,2.86,1.04,0.01,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","CTTGGTCACAACGAAC",9,233.3,10.27,-0.5,0.05,2.96,1.01,0,"1 nonsynonymous","C6D",1
"lib1","SARS-CoV-2","CTTGGTGCACGGTAAA",10,58.53,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R25E A105I",2
"lib1","SARS-CoV-2","CTTGGTGGTTGGGGAT",13,62.89,6.58,-4.18,0.47,1.5,1.19,0.02,">1 nonsynonymous","T3L V181N",2
"lib1","SARS-CoV-2","CTTGGTTAACATAACT",1,52.19,10.65,-0.12,0.09,2.93,1.04,0,">1 nonsynonymous","I2A F134H",2
"lib1","SARS-CoV-2","CTTGGTTAATACAAGA",3,99.85,10.18,-0.58,0.09,2.79,1.03,0,">1 nonsynonymous","G9S P133T T201K",3
"lib1","SARS-CoV-2","CTTGGTTACTTCGCCG",14,186.28,9.44,-1.32,0.08,2.65,1.11,0,"1 nonsynonymous","R73L",1
"lib1","SARS-CoV-2","CTTGGTTTAACCCAAG",7,193.47,9.21,-1.56,0.05,2.89,1.09,0,">1 nonsynonymous","L60Y G117D",2
"lib1","SARS-CoV-2","CTTGTAAAACGTTTAC",6,98.67,10.01,-0.75,0.15,2.23,1.07,0.01,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","CTTGTAAAGTGATACT",2,24.4,10.62,-0.14,0.04,2.94,1.03,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","CTTGTAAGCTAGGAAC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","S43* K48H I88P",3
"lib1","SARS-CoV-2","CTTGTACTCCATTACG",9,144.84,10.06,-0.71,0.06,2.85,1.02,0,">1 nonsynonymous","N4D V103I V115T P169R",4
"lib1","SARS-CoV-2","CTTGTAGAGATACATC",2,34.92,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y35R N64R Y121S A145C",4
"lib1","SARS-CoV-2","CTTGTATGTATTCGGA",1,0.9,NA,NA,NA,NA,NA,NA,"stop","A81* T201S",2
"lib1","SARS-CoV-2","CTTGTCAAAAATTGCA",2,45.71,10.11,-0.66,0.08,2.59,1.05,0,">1 nonsynonymous","S43V N58V P149W",3
"lib1","SARS-CoV-2","CTTGTCAAGTTACACT",3,38.81,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","N13S G51R T63M G155V",4
"lib1","SARS-CoV-2","CTTGTCATCAAGTTTG",2,68.04,8.67,-2.09,0.1,2.87,1.09,0,">1 nonsynonymous","S43V G117D Y175F",3
"lib1","SARS-CoV-2","CTTGTCATTCCCGTGC",2,7.88,10.63,-0.14,0.32,2.48,1,0.05,">1 nonsynonymous","A18G P149Q S184F",3
"lib1","SARS-CoV-2","CTTGTCCCCACCTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H A105S N157Q",3
"lib1","SARS-CoV-2","CTTGTCCCGAGGGCAA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","R27* D90V Y165Q",3
"lib1","SARS-CoV-2","CTTGTCCGCACCTAAG",8,119.85,9.93,-0.84,0.05,2.73,1.06,0,">1 nonsynonymous","G9L A33R F160Y",3
"lib1","SARS-CoV-2","CTTGTCGAAGATAACG",1,50.07,9.65,-1.12,0.21,2.18,1.09,0.02,">1 nonsynonymous","F12V D98G Q168N",3
"lib1","SARS-CoV-2","CTTGTCGTCCTGCTTC",4,168.78,9.97,-0.8,0.08,2.46,1.04,0,">1 nonsynonymous","S19G I104M T201E",3
"lib1","SARS-CoV-2","CTTGTGAACGGAGTCC",2,8.72,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F70T D97T I142V E186V",4
"lib1","SARS-CoV-2","CTTGTGCCAAACAATG",7,42.54,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","F167Q",1
"lib1","SARS-CoV-2","CTTGTGCGCTACGGAG",5,63.72,9.98,-0.79,0.08,2.37,1.05,0,">1 nonsynonymous","C6P S41Y",2
"lib1","SARS-CoV-2","CTTGTGCGGAACCGCA",1,57.03,7.86,-2.9,0.32,1.5,1.09,0.04,">1 nonsynonymous","C6D Y21H V37C S41L G83R",5
"lib1","SARS-CoV-2","CTTGTGCTGATCAACG",12,1939.51,8.36,-2.4,0.37,1.5,1,0.05,">1 nonsynonymous","D34S L60M N64E R124G",4
"lib1","SARS-CoV-2","CTTGTGGAACATCAGA",6,3606.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6P D90V G152S",3
"lib1","SARS-CoV-2","CTTGTGGTCTAGATCA",5,0.92,NA,NA,NA,NA,NA,NA,"stop","L38F Y91*",2
"lib1","SARS-CoV-2","CTTGTGTAAAACAATA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","F12R A18G S36F Y66P N130* C158Y",6
"lib1","SARS-CoV-2","CTTGTGTACTGCTAGT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","L95* Y121G P149F",3
"lib1","SARS-CoV-2","CTTGTTACAATACCCT",3,27.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I80P G86L G101Y",3
"lib1","SARS-CoV-2","CTTGTTACATCTGATC",2,40.72,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A14R W23S N40W L60K P82W D112N Y143S T148E",8
"lib1","SARS-CoV-2","CTTGTTAGTCGAATAA",4,29.82,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","A14V T85K P161I",3
"lib1","SARS-CoV-2","CTTGTTAGTTACAGGA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T3F F99* V115K",3
"lib1","SARS-CoV-2","CTTGTTATAAACACGG",12,141.73,7.61,-3.15,0.29,1.5,1.11,0.03,">1 nonsynonymous","G83M Y91G L187K G196W T201S",5
"lib1","SARS-CoV-2","CTTGTTCTAATGACTG",3,166.08,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","K56V S113G I142V V153A G172N",5
"lib1","SARS-CoV-2","CTTGTTCTAGAATATT",7,85.06,10.37,-0.39,0.05,2.91,1.03,0,">1 nonsynonymous","G9H F47I N130V T140G",4
"lib1","SARS-CoV-2","CTTGTTCTTTGACACG",3,17.24,6.75,-4.01,0.26,1.6,1.04,0.01,">1 nonsynonymous","N1L D98G S113F Y121R K128N N130S T201I",7
"lib1","SARS-CoV-2","CTTGTTGAAAATATCC",6,50.93,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34N K56V N92Q N120S S147I",5
"lib1","SARS-CoV-2","CTTGTTGAACAACCTA",8,0.43,NA,NA,NA,NA,NA,NA,"stop","E10* K87A P149I",3
"lib1","SARS-CoV-2","CTTGTTGACTGTTTCC",4,3.61,NA,NA,NA,NA,NA,NA,"stop","T15V F44L Y50P D68M K94* V103T L122Q",7
"lib1","SARS-CoV-2","CTTGTTGCTCGTTGTA",3,71.08,10.18,-0.58,0.06,2.64,1.08,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","CTTGTTTTCGTCCGAT",6,89.36,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N107R Y123L R136P",3
"lib1","SARS-CoV-2","CTTTAAAAAACAAATT",9,50,9.07,-1.7,0.15,1.5,1.12,0.01,">1 nonsynonymous","G9M P82L",2
"lib1","SARS-CoV-2","CTTTAAAAAATCCACA",2,0.34,NA,NA,NA,NA,NA,NA,"stop","G9* S139N",2
"lib1","SARS-CoV-2","CTTTAAAAAGGAGAAT",1,45.13,9.43,-1.33,0.09,2.85,1.08,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","CTTTAAAAGGTGCAAT",10,265.84,10.19,-0.57,0.03,2.94,1.01,0,"1 nonsynonymous","Y91W",1
"lib1","SARS-CoV-2","CTTTAAAAGTTTTCTC",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P A22T G51D V77W Y121D",5
"lib1","SARS-CoV-2","CTTTAAACAAAGTGCT",2,8.07,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","Y35V K48E F99L Y175I",4
"lib1","SARS-CoV-2","CTTTAAACATCACTTA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G T100S",2
"lib1","SARS-CoV-2","CTTTAAACCCAATATG",7,82.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S36V T55V N107E R127A T148P",5
"lib1","SARS-CoV-2","CTTTAAACCCCAAGTT",4,1015.08,9.48,-1.29,0.06,2.72,1.07,0,">1 nonsynonymous","N118I E154P",2
"lib1","SARS-CoV-2","CTTTAAACTAAGATAT",11,249.83,8.86,-1.9,0.06,2.81,1.1,0,">1 nonsynonymous","G146C Q168R",2
"lib1","SARS-CoV-2","CTTTAAACTCACTAAA",4,51.41,6.17,-4.59,0.81,1.5,1.26,0.02,">1 nonsynonymous","P82I Y119L",2
"lib1","SARS-CoV-2","CTTTAAAGATTTAGAT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L5* K56G W106T",3
"lib1","SARS-CoV-2","CTTTAAATATACACCG",7,1.75,NA,NA,NA,NA,NA,NA,"stop","A42D C61K A89S S113*",4
"lib1","SARS-CoV-2","CTTTAAATATACACCT",4,0.92,NA,NA,NA,NA,NA,NA,"stop","A42D C61K A89S S113*",4
"lib1","SARS-CoV-2","CTTTAAATTATCACTT",5,18.67,8.5,-2.26,0.13,1.82,1.16,0.01,">1 nonsynonymous","P96G P161S",2
"lib1","SARS-CoV-2","CTTTAACAACTCCAAG",2,23.63,9.89,-0.88,0.13,2.16,1.16,0.01,">1 nonsynonymous","A14N P133T",2
"lib1","SARS-CoV-2","CTTTAACAAGACGGTT",2,26.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2T E10D L95S D137W V173I Y178I",6
"lib1","SARS-CoV-2","CTTTAACAGAGTAGAG",2,31.75,10.69,-0.07,0.04,2.96,1,0,">1 nonsynonymous","Y39M G83Q N171I",3
"lib1","SARS-CoV-2","CTTTAACAGGACACAA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R F12R P96D Y119A",4
"lib1","SARS-CoV-2","CTTTAACCCACTCTAG",1,54.85,10.28,-0.48,0.05,2.78,1.05,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","CTTTAACGCGCGCCTC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","Y50N V103* N120S K128T",4
"lib1","SARS-CoV-2","CTTTAACTTTGGAACC",3,58.72,10.5,-0.26,0.07,2.87,1,0,"1 nonsynonymous","S36Y",1
"lib1","SARS-CoV-2","CTTTAAGAACAAGTGT",2,23.45,10.16,-0.6,0.07,2.92,1,0,">1 nonsynonymous","G116R S139T F156V",3
"lib1","SARS-CoV-2","CTTTAAGAAGGAAAAG",10,1.68,NA,NA,NA,NA,NA,NA,"stop","V37R D98* G146K T201M",4
"lib1","SARS-CoV-2","CTTTAAGAATGTGACT",10,111.19,10.64,-0.12,0.04,2.88,1.05,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","CTTTAAGACTGCACCG",7,99.22,10.58,-0.19,0.04,2.89,1.04,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","CTTTAAGATAATAGGG",3,18.9,7.34,-3.42,0.49,1.5,1.08,0.06,">1 nonsynonymous","T3V F44I D59Y R124H F167Y A192S",6
"lib1","SARS-CoV-2","CTTTAAGATCCACCAA",9,32.2,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C6N A14P A18N L122P",4
"lib1","SARS-CoV-2","CTTTAAGATTAGGTAA",5,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R F99K G155C Q176K",4
"lib1","SARS-CoV-2","CTTTAAGGAAGCATGT",3,38.95,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A42G C61A Y93W S113R G146S T170S P177Y",7
"lib1","SARS-CoV-2","CTTTAAGGAGTTCATA",2,27.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K94N N107P G152T F167T",4
"lib1","SARS-CoV-2","CTTTAAGGCACAGAGA",3,86.64,10.12,-0.65,0.07,2.74,1.06,0,">1 nonsynonymous","F8T K114W L122S",3
"lib1","SARS-CoV-2","CTTTAAGGTACTTACT",3,1.66,NA,NA,NA,NA,NA,NA,"stop","N24F F99P N110* F167M",4
"lib1","SARS-CoV-2","CTTTAAGTACTCCGAT",1,12.84,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6I D59A D68L E135S S164G",5
"lib1","SARS-CoV-2","CTTTAAGTCACCTCAA",1,27.8,6,-4.76,1.22,3,1.12,0.02,">1 nonsynonymous","N13F F44P V65R A89W",4
"lib1","SARS-CoV-2","CTTTAATAAACCTACT",2,23.47,9.98,-0.79,0.14,2.25,1.02,0.01,">1 nonsynonymous","V77E L122R",2
"lib1","SARS-CoV-2","CTTTAATGAAAATAAT",1,32.32,9.04,-1.73,0.15,2.57,1.14,0.02,">1 nonsynonymous","V65T Y119P",2
"lib1","SARS-CoV-2","CTTTAATGAATTTTCC",4,90.23,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","E10L F70S D90V",3
"lib1","SARS-CoV-2","CTTTAATGGGATACAG",6,30.07,10.33,-0.43,0.09,2.34,1,0,">1 nonsynonymous","N107T Q168W",2
"lib1","SARS-CoV-2","CTTTACAAACACCCTT",1,26.02,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","C49I T85Q G152S Q176S",4
"lib1","SARS-CoV-2","CTTTACAAATGAAAAT",6,76.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R124N Q144V T201S",3
"lib1","SARS-CoV-2","CTTTACAACGTAATTT",1,49.83,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","E10R D137P",2
"lib1","SARS-CoV-2","CTTTACAACTAAGTAC",2,30.18,7.31,-3.46,0.39,1.5,1.14,0.03,">1 nonsynonymous","G86L K114A",2
"lib1","SARS-CoV-2","CTTTACAATATACAAA",2,72.97,8.48,-2.28,0.11,2.51,1.09,0,">1 nonsynonymous","V37N V153D Q176S",3
"lib1","SARS-CoV-2","CTTTACAGAACATTCA",1,26.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6V I72E A89L F99Y",4
"lib1","SARS-CoV-2","CTTTACATATAACTGA",3,46.54,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R16V Q84I Y159K F167M",4
"lib1","SARS-CoV-2","CTTTACATGACAGGAT",5,43.34,10.65,-0.11,0.07,2.88,1.05,0,"1 nonsynonymous","T85Q",1
"lib1","SARS-CoV-2","CTTTACATTCTGCTAC",4,12.48,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","Q163T L183P",2
"lib1","SARS-CoV-2","CTTTACCAAAGTACCG",3,0,NA,NA,NA,NA,NA,NA,"stop","R27* A33R E141Y",3
"lib1","SARS-CoV-2","CTTTACCAACACACAG",4,21.05,11,0.24,0.09,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTACCAAGCAATAC",1,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M Y66P T85N D90R",4
"lib1","SARS-CoV-2","CTTTACCAGAAAGTTA",5,116.64,10.29,-0.47,0.12,2.32,1.02,0.01,">1 nonsynonymous","N1R F99L V173L",3
"lib1","SARS-CoV-2","CTTTACCATTGGAAAT",12,16.46,NA,NA,NA,NA,NA,NA,"stop","I2M Y21F L60P L122*",4
"lib1","SARS-CoV-2","CTTTACCCAAGCGATG",2,18.61,10.12,-0.64,0.13,2.49,1,0.01,">1 nonsynonymous","T55W G83T N130L",3
"lib1","SARS-CoV-2","CTTTACCGACAATGCT",5,118.58,10.82,0.06,0.08,2.84,1.12,0,">1 nonsynonymous","P7A N64S Y123F",3
"lib1","SARS-CoV-2","CTTTACCGGAAACTGC",4,1.06,NA,NA,NA,NA,NA,NA,"stop","S53R N151* P197V",3
"lib1","SARS-CoV-2","CTTTACCTCATAGCTA",1,5,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","Y50Q K56L L122R N151D T170Y",5
"lib1","SARS-CoV-2","CTTTACCTTAGAACAA",5,93.09,10.76,0,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTACGAAAAATATT",3,141.1,8.46,-2.31,0.1,2.74,1.05,0,"1 nonsynonymous","Y175M",1
"lib1","SARS-CoV-2","CTTTACGATCGATGTT",9,17.82,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","I2K N13H S19P K56W P161R",5
"lib1","SARS-CoV-2","CTTTACGTCATATGAC",5,1.13,NA,NA,NA,NA,NA,NA,"stop","S41R D97F C158* F167I",4
"lib1","SARS-CoV-2","CTTTACTATAGATCTT",1,0.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","CTTTACTTCCTTACTC",8,132.79,10.24,-0.53,0.08,2.53,1.01,0,">1 nonsynonymous","L5D W106M K114R",3
"lib1","SARS-CoV-2","CTTTAGAAAAGTAGTG",2,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S T140Y",2
"lib1","SARS-CoV-2","CTTTAGACGAAAGTTT",3,7.91,8.67,-2.1,0.41,1.74,1.3,0.04,">1 nonsynonymous","F160Y V182S",2
"lib1","SARS-CoV-2","CTTTAGACGCTTCCAC",3,61.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L57R I88G",2
"lib1","SARS-CoV-2","CTTTAGAGATATTTGA",5,1.57,NA,NA,NA,NA,NA,NA,"stop","R25* S53F",2
"lib1","SARS-CoV-2","CTTTAGAGCTCTATTT",4,124.78,8.67,-2.09,0.08,2.38,1.13,0,">1 nonsynonymous","S19H T46W G116H T148H",4
"lib1","SARS-CoV-2","CTTTAGAGGCAGTATG",15,130.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44E I80T P96A S113R",4
"lib1","SARS-CoV-2","CTTTAGAGTAACATGG",11,2.34,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","CTTTAGCCTAACGGAT",4,1.42,NA,NA,NA,NA,NA,NA,"stop","L5S Y91I L111*",3
"lib1","SARS-CoV-2","CTTTAGCTAAAAGAAT",3,74.4,10.25,-0.52,0.07,2.79,1.06,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","CTTTAGCTAGTACGAA",3,17.81,6,-4.76,2,1.5,1.38,0.02,">1 nonsynonymous","N92Q D97R L187R",3
"lib1","SARS-CoV-2","CTTTAGCTGTTAAAGT",5,36.64,8.71,-2.05,0.11,2.87,1.07,0.01,"1 nonsynonymous","S113K",1
"lib1","SARS-CoV-2","CTTTAGCTTAATCTGG",5,19.22,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","A33N K48D D68S",3
"lib1","SARS-CoV-2","CTTTAGCTTGATCCCG",7,59.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R73P D90R D97N A105M S139P A192Y",6
"lib1","SARS-CoV-2","CTTTAGCTTTACTATT",4,26.23,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","P96T G146C K198D",3
"lib1","SARS-CoV-2","CTTTAGGAAACTGATT",15,244.43,8.37,-2.4,0.14,2.16,1.09,0.01,">1 nonsynonymous","A14Y T100V Y119R F156V",4
"lib1","SARS-CoV-2","CTTTAGGAACAAAGTA",1,11.22,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","P7T R27M K87W W106C S113T L125R Y143L G174D",8
"lib1","SARS-CoV-2","CTTTAGGAACAGACAT",2,68.95,9.23,-1.53,0.19,1.58,1.18,0.01,">1 nonsynonymous","A14V K48V Y123L",3
"lib1","SARS-CoV-2","CTTTAGGGCCCTGTAG",1,38.67,8.55,-2.22,0.12,1.95,1.13,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","CTTTAGGTACCTTTGC",1,53.3,8.41,-2.36,0.19,1.5,1.08,0.02,">1 nonsynonymous","Y35K K94Q A192T",3
"lib1","SARS-CoV-2","CTTTAGGTCGCGCAAT",4,2.02,NA,NA,NA,NA,NA,NA,"stop","P149* T201M",2
"lib1","SARS-CoV-2","CTTTAGTAAAACGTAA",2,52.7,9.95,-0.82,0.1,2.59,1,0,">1 nonsynonymous","D98C N110C",2
"lib1","SARS-CoV-2","CTTTAGTTAATAAAGC",6,35.31,9.77,-0.99,0.14,2.38,1.03,0.01,">1 nonsynonymous","N58Y P96S",2
"lib1","SARS-CoV-2","CTTTATAAAACAATGT",2,10.2,8.77,-2,0.23,2.4,1.27,0.02,">1 nonsynonymous","T100S G117K",2
"lib1","SARS-CoV-2","CTTTATAAACTCTGAG",3,27.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9S G101T S147T Q176S",4
"lib1","SARS-CoV-2","CTTTATAAGTGAAAAT",5,15.37,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","N13S P54S N107A N120C K128T C158N",6
"lib1","SARS-CoV-2","CTTTATACACTGGCCC",1,35.17,7.27,-3.49,0.41,1.5,1,0.04,">1 nonsynonymous","Y21E F62D A105I",3
"lib1","SARS-CoV-2","CTTTATACGCTGCCGC",13,8.18,NA,NA,NA,NA,NA,NA,"stop","T15S S29* Y35Q F70M I104T L162R",6
"lib1","SARS-CoV-2","CTTTATACTAACGCGG",2,56.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I28A F70R Y91D L122V",4
"lib1","SARS-CoV-2","CTTTATAGCCTTACGA",4,0.87,NA,NA,NA,NA,NA,NA,"stop","V37A N107* E154H Y178V C195W",5
"lib1","SARS-CoV-2","CTTTATATACAAACAA",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V T55R L95A",3
"lib1","SARS-CoV-2","CTTTATATGAACCTCT",9,57.93,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34W Y93F G146C",3
"lib1","SARS-CoV-2","CTTTATATTGACGCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V52D Y91* L162Q",3
"lib1","SARS-CoV-2","CTTTATATTGGTACGG",19,191.62,10.18,-0.58,0.07,2.61,1.03,0,">1 nonsynonymous","N64F D90W P149S",3
"lib1","SARS-CoV-2","CTTTATCTCCGCGTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y Y66V W106L N120F E186G",5
"lib1","SARS-CoV-2","CTTTATCTTAGGGCAT",8,58.48,9.33,-1.43,0.15,1.73,1.17,0.01,">1 nonsynonymous","E10D F62V A67F V77T",4
"lib1","SARS-CoV-2","CTTTATGAACAGAATG",5,8.2,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","D59A L122I S129N D137V C158P",5
"lib1","SARS-CoV-2","CTTTATTAAACTATGC",5,46.53,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35C K87F C158D",3
"lib1","SARS-CoV-2","CTTTATTAGCCTAATA",3,92.33,10.79,0.03,0.06,2.91,1.04,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","CTTTATTAGGAGGATC",5,1.87,NA,NA,NA,NA,NA,NA,"stop","N1L L38R F62S V173* F185I P191T",6
"lib1","SARS-CoV-2","CTTTATTCACACCTAG",1,27.51,10.91,0.14,0.07,2.89,1.06,0,">1 nonsynonymous","T55L N110Q",2
"lib1","SARS-CoV-2","CTTTATTCATCATAAA",3,46.34,10.76,-0.01,0.06,2.95,1,0,">1 nonsynonymous","R27M T201N",2
"lib1","SARS-CoV-2","CTTTATTCATTCTTCT",12,2.75,NA,NA,NA,NA,NA,NA,"stop","T15* T148L P161T",3
"lib1","SARS-CoV-2","CTTTATTCCGTGTCAG",3,51.7,10.77,0,0.1,2.81,1.07,0,"1 nonsynonymous","K128G",1
"lib1","SARS-CoV-2","CTTTCAAATAAACGAA",7,86.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10I C150F Y159L",3
"lib1","SARS-CoV-2","CTTTCAACCCCTAAAC",5,20.89,8.08,-2.68,0.46,1.71,1.09,0.07,">1 nonsynonymous","V20Q N64T P197L",3
"lib1","SARS-CoV-2","CTTTCAACCTCGACGC",2,4.81,NA,NA,NA,NA,NA,NA,"stop","K26D Y39* N107G S113L Y175T",5
"lib1","SARS-CoV-2","CTTTCAACGTTGCAAT",2,18,10.04,-0.73,0.06,2.83,1.05,0,">1 nonsynonymous","K56H F156M",2
"lib1","SARS-CoV-2","CTTTCAATAATCCTAG",6,77.75,10.74,-0.02,0.07,2.87,1.07,0,"1 nonsynonymous","T140A",1
"lib1","SARS-CoV-2","CTTTCAATAGTAGTAT",3,184.33,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6M Y91K S129M N151K G172V",5
"lib1","SARS-CoV-2","CTTTCAATCCAACAAG",5,342.37,10.53,-0.24,0.03,2.95,1.01,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","CTTTCAATCTAGATGC",5,74.34,8.99,-1.77,0.15,2.07,1.13,0.01,">1 nonsynonymous","R73C D90M",2
"lib1","SARS-CoV-2","CTTTCAATTACTCCGT",2,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L L183D",2
"lib1","SARS-CoV-2","CTTTCAATTTTCATCG",1,75.58,10.58,-0.18,0.04,2.84,1.03,0,"1 nonsynonymous","E135M",1
"lib1","SARS-CoV-2","CTTTCACCACCACTCC",6,22.01,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","N1R C49A G101M S200T",4
"lib1","SARS-CoV-2","CTTTCACCGGAAGTCC",2,49.24,9.57,-1.2,0.05,2.9,1.03,0,"1 nonsynonymous","R73P",1
"lib1","SARS-CoV-2","CTTTCACCTTCCACGG",4,21.67,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F12M S36C G83T",3
"lib1","SARS-CoV-2","CTTTCAGACATTTGGG",3,5.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","CTTTCAGGTAGGAGAA",3,45.68,10.91,0.15,0.07,2.94,1.02,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","CTTTCATGCGCACCCA",10,130.04,10.56,-0.21,0.04,2.89,1.06,0,">1 nonsynonymous","K94R K128P A190D",3
"lib1","SARS-CoV-2","CTTTCATTATCGTTGG",5,67.19,10.59,-0.18,0.04,2.94,1.02,0,">1 nonsynonymous","A105S L188W",2
"lib1","SARS-CoV-2","CTTTCATTGAAAAATA",2,18.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3L F44T D68G C150N",4
"lib1","SARS-CoV-2","CTTTCATTTACAAAAC",1,0.93,NA,NA,NA,NA,NA,NA,"stop","I2P T63* G86I D112*",4
"lib1","SARS-CoV-2","CTTTCCAAACATTTAA",6,27.66,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T3H L57R D75L I104T N110K E154H V181L",7
"lib1","SARS-CoV-2","CTTTCCAAACCTTTAC",2,12.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R R27I D59V T85N I88T D98H",6
"lib1","SARS-CoV-2","CTTTCCAAACTTACGT",4,103.06,10.62,-0.15,0.04,2.95,1.03,0,">1 nonsynonymous","K56L D97N",2
"lib1","SARS-CoV-2","CTTTCCAAAGGCCGTT",5,66.3,10.1,-0.66,0.06,2.97,1,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","CTTTCCAACTGGTAAA",2,34.81,10.49,-0.27,0.07,3,1,0,">1 nonsynonymous","L5T Y39V T85Y N120R",4
"lib1","SARS-CoV-2","CTTTCCACGGCGATAG",8,211.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K87G G172Q",2
"lib1","SARS-CoV-2","CTTTCCACTGGTTTTT",3,72.62,10.67,-0.09,0.06,2.94,1,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","CTTTCCATACAGAGTG",4,29.53,8.96,-1.81,0.35,1.5,1.13,0.07,">1 nonsynonymous","N107T N118H",2
"lib1","SARS-CoV-2","CTTTCCCAAAGTAATG",1,29.1,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E76W Y91D L122H G146P",4
"lib1","SARS-CoV-2","CTTTCCCCAATCATCG",1,20.84,9.2,-1.56,0.37,1.5,1,0.07,">1 nonsynonymous","Y91D S129G C195A K199I",4
"lib1","SARS-CoV-2","CTTTCCCTTTATCACT",4,33.53,7.32,-3.44,0.37,1.5,1.2,0.04,">1 nonsynonymous","T3S G86L",2
"lib1","SARS-CoV-2","CTTTCCTTAGGTCGCT",1,7.65,7.13,-3.64,0.78,1.5,1,0.08,">1 nonsynonymous","S45Y L95C R136C",3
"lib1","SARS-CoV-2","CTTTCGAAATGTGAGA",4,81.96,10.32,-0.45,0.06,2.86,1.01,0,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","CTTTCGAACTGTAAAG",4,8.88,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","K56T V71R G146C",3
"lib1","SARS-CoV-2","CTTTCGAAGTTACTAA",2,38.5,10.75,-0.01,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTCGAGATAACTGG",7,75.71,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P96D R127G P191R",3
"lib1","SARS-CoV-2","CTTTCGAGGAAAGATA",2,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P D97R C150F L187Y",4
"lib1","SARS-CoV-2","CTTTCGCAGTTTCAAA",5,0.08,NA,NA,NA,NA,NA,NA,"stop","Y91L K128* V180K",3
"lib1","SARS-CoV-2","CTTTCGCGTCACATTT",6,53.06,10.66,-0.11,0.08,2.85,1.08,0,">1 nonsynonymous","R16V N64T",2
"lib1","SARS-CoV-2","CTTTCGCTGGATTCCT",6,82.08,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C61E F126L C150R",3
"lib1","SARS-CoV-2","CTTTCGCTTGAAAAAT",2,38.25,10.44,-0.32,0.05,2.9,1.08,0,">1 nonsynonymous","I2L K87I",2
"lib1","SARS-CoV-2","CTTTCGGAAACCATTT",2,19.85,8.43,-2.33,0.18,1.71,1.13,0.02,">1 nonsynonymous","R16C S43H G86D",3
"lib1","SARS-CoV-2","CTTTCGGACCTTAAAT",1,15.52,10.66,-0.11,0.1,2.84,1.11,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","CTTTCGTACAGCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E G86I K94R P149Q S200G",5
"lib1","SARS-CoV-2","CTTTCGTACGTAATCA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","K26* S41I V103S",3
"lib1","SARS-CoV-2","CTTTCGTATTAGAAGT",3,6.69,6.39,-4.37,0.89,1.5,1.09,0.07,">1 nonsynonymous","A14V A81P",2
"lib1","SARS-CoV-2","CTTTCGTCTTTAAACC",2,25.2,9.16,-1.6,0.14,1.59,1.08,0.01,">1 nonsynonymous","V37T T63C A105F",3
"lib1","SARS-CoV-2","CTTTCTAAGTCGAACC",3,42.37,10.18,-0.58,0.12,2.53,1.04,0.01,">1 nonsynonymous","T55N D90G E141Q",3
"lib1","SARS-CoV-2","CTTTCTAATAGCTAGG",12,197.08,9.72,-1.05,0.08,2.67,1.02,0,">1 nonsynonymous","N110E Y121W",2
"lib1","SARS-CoV-2","CTTTCTAATCTACAAT",5,132.6,10.82,0.05,0.07,2.94,1.05,0,"1 nonsynonymous","Y39I",1
"lib1","SARS-CoV-2","CTTTCTACCATGATGT",5,120.11,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6F F160G Y165V V182I",4
"lib1","SARS-CoV-2","CTTTCTACTGGCCCTG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P N58I F99S I104R Q144H",5
"lib1","SARS-CoV-2","CTTTCTAGCCGGTGGG",4,25.13,10.79,0.03,0.11,2.86,1.11,0,">1 nonsynonymous","V173L K198V",2
"lib1","SARS-CoV-2","CTTTCTAGGCGGTACA",3,17.93,9.8,-0.96,0.2,1.78,1.12,0.03,">1 nonsynonymous","Y50S S200P",2
"lib1","SARS-CoV-2","CTTTCTAGGTACATTG",5,51.38,10.75,-0.02,0.06,2.91,1.07,0,">1 nonsynonymous","I2T V77L",2
"lib1","SARS-CoV-2","CTTTCTATTACACCTA",3,3.93,NA,NA,NA,NA,NA,NA,"stop","N13* D68* S129T",3
"lib1","SARS-CoV-2","CTTTCTCAAGGCACTT",2,60.4,8.71,-2.05,0.12,2.55,1.11,0.01,">1 nonsynonymous","S45L Y119S",2
"lib1","SARS-CoV-2","CTTTCTCAGCAGTAAG",4,84.99,10.73,-0.04,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTCTCGTAAAACAA",3,33.79,10.77,0.01,0.13,2.8,1.08,0.01,">1 nonsynonymous","T140Q Q168A",2
"lib1","SARS-CoV-2","CTTTCTGACCGATACT",10,83.61,8.06,-2.7,0.18,1.5,1.07,0.01,">1 nonsynonymous","T15D A18S Y165A",3
"lib1","SARS-CoV-2","CTTTCTGAGTGTGTAT",9,4.7,NA,NA,NA,NA,NA,NA,"stop","I2V N13M S43* Y50I A105V C158P",6
"lib1","SARS-CoV-2","CTTTCTGCTAGGCGGA",10,110.41,10.64,-0.13,0.04,2.98,1,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","CTTTCTTACTTCGACA",3,73.75,10.74,-0.02,0.02,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTCTTTTCATCGCG",1,319.24,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y119H Q176P",2
"lib1","SARS-CoV-2","CTTTGAAAAAAAATAA",1,15.17,6.27,-4.49,0.82,1.5,1.09,0.04,">1 nonsynonymous","S29W R124S I138W E154D",4
"lib1","SARS-CoV-2","CTTTGAAAATAGTAGA",3,44.79,10.8,0.03,0.07,2.86,1.11,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","CTTTGAAACACATTTG",1,8.31,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N4G V11S P54K D112T Y121K G146M",6
"lib1","SARS-CoV-2","CTTTGAAAGTAATATA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","Y121* S129E",2
"lib1","SARS-CoV-2","CTTTGAACGTAAGTAG",1,104.51,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V20P F47V L60R D90W L111C T148D P177C",7
"lib1","SARS-CoV-2","CTTTGAACGTATAATA",4,65.73,6.47,-4.29,0.51,1.5,1.15,0.02,">1 nonsynonymous","Q84H S113T G146V V173R",4
"lib1","SARS-CoV-2","CTTTGAAGTGATTAAC",16,136.08,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","P7N A14V R127P G146K",4
"lib1","SARS-CoV-2","CTTTGAATAGTTAAAA",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84N N109R N171R",3
"lib1","SARS-CoV-2","CTTTGAATCAATCTGT",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R K87D",2
"lib1","SARS-CoV-2","CTTTGACAAATAAACC",3,20.16,9.39,-1.37,0.23,1.5,1.07,0.02,"1 nonsynonymous","Y50K",1
"lib1","SARS-CoV-2","CTTTGACAAGAGTGTG",2,9.64,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","N13K V20G Y121L",3
"lib1","SARS-CoV-2","CTTTGACCTCTTACGG",2,17.14,10.45,-0.32,0.1,2.72,1.01,0.01,">1 nonsynonymous","N1L K48C",2
"lib1","SARS-CoV-2","CTTTGACGATTCACAA",11,154.81,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D97K P149Q F167G",3
"lib1","SARS-CoV-2","CTTTGACTACGGTTAA",2,30.64,10.65,-0.11,0.12,2.96,1.05,0.01,"1 nonsynonymous","N64M",1
"lib1","SARS-CoV-2","CTTTGAGAAGAATTAG",5,56.55,9.94,-0.82,0.05,2.8,1.01,0,">1 nonsynonymous","C61V K87G T100K",3
"lib1","SARS-CoV-2","CTTTGAGACTTATTAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K48D G101L L122R R127L",5
"lib1","SARS-CoV-2","CTTTGAGAGGTAACCT",1,15.32,8.56,-2.21,0.16,2.97,1.06,0.01,"1 nonsynonymous","A145W",1
"lib1","SARS-CoV-2","CTTTGAGATTCATACT",5,54.03,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51V Y119T Y143L",3
"lib1","SARS-CoV-2","CTTTGAGCAGCGACGA",3,17.71,9.49,-1.27,0.3,1.5,1,0.06,">1 nonsynonymous","E76N D137I",2
"lib1","SARS-CoV-2","CTTTGAGCTTTGAGTC",5,70.05,10.71,-0.06,0.06,2.9,1.06,0,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","CTTTGAGGTAATCCAT",5,0.6,NA,NA,NA,NA,NA,NA,"stop","T63R G117T E154F C195*",4
"lib1","SARS-CoV-2","CTTTGAGTATGATGAA",1,6.02,9.73,-1.03,0.16,2.79,1.21,0.01,">1 nonsynonymous","L125V P149K S200E",3
"lib1","SARS-CoV-2","CTTTGAGTCACATCCC",2,43.26,9.75,-1.01,0.18,1.82,1.2,0.01,"1 nonsynonymous","D137N",1
"lib1","SARS-CoV-2","CTTTGATATATCCACC",7,114.26,10.22,-0.55,0.04,2.88,1.07,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","CTTTGATCAATCTTAT",1,6.64,9.85,-0.91,0.27,2.02,1.09,0.01,">1 nonsynonymous","L38K T148A",2
"lib1","SARS-CoV-2","CTTTGATGAATTCGAT",3,39.63,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N30I V37L F44I R124P S200T",5
"lib1","SARS-CoV-2","CTTTGATGGTGACGCT",8,105.96,10,-0.77,0.13,2,1.08,0.01,">1 nonsynonymous","Y50K L122R",2
"lib1","SARS-CoV-2","CTTTGATTTTACCAGT",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A C61S T201R",3
"lib1","SARS-CoV-2","CTTTGATTTTTTAACG",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E V37S D90I",3
"lib1","SARS-CoV-2","CTTTGCAAACTCTCGC",5,15.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15I D90N W106C E141A",4
"lib1","SARS-CoV-2","CTTTGCACGAAATAAT",2,55.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86V N109H Y123N Q144K",4
"lib1","SARS-CoV-2","CTTTGCAGTATCCTGT",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64S K87S T201S",3
"lib1","SARS-CoV-2","CTTTGCATGAATGGTA",4,37.68,6.26,-4.51,0.91,1.5,1.18,0.04,">1 nonsynonymous","C49A N64K K94Y N120S",4
"lib1","SARS-CoV-2","CTTTGCCAATGACTTC",1,10.67,9.24,-1.52,0.14,2.59,1.11,0.01,">1 nonsynonymous","L5A N24S I88V F126I I142V",5
"lib1","SARS-CoV-2","CTTTGCCATGAAATAA",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127I N157I",2
"lib1","SARS-CoV-2","CTTTGCCATGACTTCG",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P L125Y",2
"lib1","SARS-CoV-2","CTTTGCCCCTAAAAGA",4,63.9,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A22K P82T L95H T100N K132S V173T",6
"lib1","SARS-CoV-2","CTTTGCGAACCTAACA",7,30.01,9.64,-1.12,0.1,1.83,1.12,0.01,">1 nonsynonymous","D137H K198S",2
"lib1","SARS-CoV-2","CTTTGCGAGGTATATA",4,27.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88R P149K",2
"lib1","SARS-CoV-2","CTTTGCGCACCCTTCC",12,147.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K56S G146S F167S",3
"lib1","SARS-CoV-2","CTTTGCGTTTATCCGT",9,176.01,8.97,-1.8,0.15,1.7,1.15,0.01,">1 nonsynonymous","I2L C31L P149S V182I",4
"lib1","SARS-CoV-2","CTTTGCTACATAGTTT",2,39.29,6.16,-4.6,1.09,1.5,1.22,0.04,">1 nonsynonymous","C6D G146L C158P",3
"lib1","SARS-CoV-2","CTTTGCTATCTAACCC",1,0,NA,NA,NA,NA,NA,NA,"stop","A22R S69* V103K G172V",4
"lib1","SARS-CoV-2","CTTTGCTGTAGTGTAC",1,27,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36K A105E",2
"lib1","SARS-CoV-2","CTTTGCTTACAATTCA",4,16.12,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V77M P96I N107T",3
"lib1","SARS-CoV-2","CTTTGGAACCGAAATG",4,34.49,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","D59M G83L G101D",3
"lib1","SARS-CoV-2","CTTTGGAAGATTGAAT",5,38.94,6,-4.76,2,3,1.21,0,">1 nonsynonymous","N4V L122P S129V Y165N",4
"lib1","SARS-CoV-2","CTTTGGCTGATACGCC",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A F99C L122S",3
"lib1","SARS-CoV-2","CTTTGGGCCAAGTGTA",12,237.43,9.12,-1.64,0.07,2.73,1.11,0,">1 nonsynonymous","P161S G174E",2
"lib1","SARS-CoV-2","CTTTGGGGCAGCAAAG",3,0.26,NA,NA,NA,NA,NA,NA,"stop","I2* T201S",2
"lib1","SARS-CoV-2","CTTTGGTGACTAACAG",3,21.89,10.36,-0.4,0.44,1.5,1,0.06,">1 nonsynonymous","I2K P7Y L57D K94I F99H L122G G152N S164K V173L",9
"lib1","SARS-CoV-2","CTTTGGTGATAGTGCG",6,66.78,6,-4.76,2,1.5,1.31,0.04,"1 nonsynonymous","F70G",1
"lib1","SARS-CoV-2","CTTTGGTGCATAGACG",1,6.7,7.5,-3.26,0.46,1.5,1,0.03,">1 nonsynonymous","Y35D K48N Y175R",3
"lib1","SARS-CoV-2","CTTTGTACCTGCCCTA",3,29.64,10.74,-0.03,0.08,2.92,1.02,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","CTTTGTACTATCTAAA",5,1.39,NA,NA,NA,NA,NA,NA,"stop","N4R K56* N64T G86R",4
"lib1","SARS-CoV-2","CTTTGTACTATGTACG",1,29.13,10.53,-0.24,0.1,2.86,1,0,">1 nonsynonymous","V37I K87T",2
"lib1","SARS-CoV-2","CTTTGTCAATAATCAC",2,21.39,8.78,-1.98,0.12,1.75,1.05,0.01,">1 nonsynonymous","D112V S139N",2
"lib1","SARS-CoV-2","CTTTGTCAATAGCAGA",7,112.24,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41M T63R R73S G86V D90R W106H C150S Q176G C195T",9
"lib1","SARS-CoV-2","CTTTGTCCAATAAAAG",1,9.33,10.77,0,0.08,2.81,1.17,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTTGTCGATGATCAG",7,81.66,9.73,-1.03,0.1,1.99,1.05,0,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","CTTTGTCGTCAATCCA",2,20.23,8.04,-2.73,0.24,1.79,1.07,0.02,">1 nonsynonymous","G117M R136S V173I",3
"lib1","SARS-CoV-2","CTTTGTCTCAAATTGT",2,27.57,6,-4.76,2,1.5,1.15,0,"1 nonsynonymous","K94T",1
"lib1","SARS-CoV-2","CTTTGTCTTGCTTTGA",2,44.58,10.81,0.05,0.1,2.82,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTGTGCTTCAAACT",13,56.2,9.79,-0.98,0.13,2.06,1.06,0.01,">1 nonsynonymous","D90V G152S",2
"lib1","SARS-CoV-2","CTTTGTGGTTTGCATT",5,22.34,8.68,-2.08,0.12,1.7,1.09,0.01,">1 nonsynonymous","F12S Q168R",2
"lib1","SARS-CoV-2","CTTTGTGTATGATGTG",1,0.49,NA,NA,NA,NA,NA,NA,"stop","N4L E10T T15E F99S R136* P169Y",6
"lib1","SARS-CoV-2","CTTTGTTATTGTACGG",10,86.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89W",1
"lib1","SARS-CoV-2","CTTTGTTTTCACCAAC",2,15.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11N Y39H K87M K94Q G166V",5
"lib1","SARS-CoV-2","CTTTTAAAAATTACCG",1,15.73,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I88G K94N F167T",3
"lib1","SARS-CoV-2","CTTTTAAAAGTACTAT",6,101.57,10.77,0,0.06,2.89,1.07,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","CTTTTAAAATCGAACA",2,12.68,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V65F A105K E186G",3
"lib1","SARS-CoV-2","CTTTTAAACATGGACT",10,90.41,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V71D D97N",2
"lib1","SARS-CoV-2","CTTTTAAAGAAACGTT",11,49.45,6.9,-3.86,0.44,1.5,1.11,0.04,">1 nonsynonymous","S41C N64M P96A R127L I142S",5
"lib1","SARS-CoV-2","CTTTTAAATAAAACTA",5,55.21,10.83,0.07,0.1,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTTAAATAATGGGC",2,14.92,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","C49G W106R G116A",3
"lib1","SARS-CoV-2","CTTTTAACACGTCCGC",2,5.54,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","C6Y Y121F R127M F156L",4
"lib1","SARS-CoV-2","CTTTTAACAGTCGGAG",8,103.42,9.58,-1.18,0.16,1.85,1.14,0.01,">1 nonsynonymous","L38T Y123S",2
"lib1","SARS-CoV-2","CTTTTAAGAAGCCAGG",6,48.68,6,-4.76,1.81,1.5,1.13,0.01,">1 nonsynonymous","F12H S53A N120T C158M",4
"lib1","SARS-CoV-2","CTTTTAAGCAAAATAA",2,8.78,6,-4.76,2,1.5,1.08,0.06,">1 nonsynonymous","N1E G83P V103M",3
"lib1","SARS-CoV-2","CTTTTAAGTACCTTTC",5,111.21,10,-0.77,0.06,2.76,1.02,0,">1 nonsynonymous","C6L T201G",2
"lib1","SARS-CoV-2","CTTTTAATGGAGTGGT",1,20.67,10.09,-0.67,0.05,2.86,1.13,0,">1 nonsynonymous","K87G A105S",2
"lib1","SARS-CoV-2","CTTTTACAACGACAAC",4,23.55,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77W Y119M",2
"lib1","SARS-CoV-2","CTTTTACATGAATACA",2,6.7,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K94W T201K",2
"lib1","SARS-CoV-2","CTTTTACATTGACGGC",8,101.92,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S29A A81C A89D D112H",4
"lib1","SARS-CoV-2","CTTTTACCACCGAAAA",5,33,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","R25E T55V V77M G83S",4
"lib1","SARS-CoV-2","CTTTTACCTGGTAAAA",6,25.71,6,-4.76,0.61,3,1.15,0,">1 nonsynonymous","I80R T100K D137S P161A V180S",5
"lib1","SARS-CoV-2","CTTTTACGACATTCGT",4,8.28,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","CTTTTACGAGCTGCCG",13,97.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S41A G101T",2
"lib1","SARS-CoV-2","CTTTTACTGTCTTCGA",7,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L T85L V103K",3
"lib1","SARS-CoV-2","CTTTTACTTTACTTAA",5,24.21,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T15I F44R Y50A K56Y",4
"lib1","SARS-CoV-2","CTTTTAGAAAACGTAT",3,8.94,10.8,0.04,0.07,2.95,1.05,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","CTTTTAGAACCTGAGA",7,134.94,10.59,-0.17,0.03,2.93,1.02,0,"1 nonsynonymous","Y143H",1
"lib1","SARS-CoV-2","CTTTTAGATCTTGTAA",3,16.85,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","K94G R124S C150Y",3
"lib1","SARS-CoV-2","CTTTTAGCGGTAGTTC",3,14.07,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","L57N Y66L V103T",3
"lib1","SARS-CoV-2","CTTTTAGCTTGTACTG",5,1.42,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib1","SARS-CoV-2","CTTTTAGGAAATAAAT",1,16.99,8.5,-2.26,0.22,2.05,1.11,0.01,">1 nonsynonymous","D90S D112L",2
"lib1","SARS-CoV-2","CTTTTAGGCCAATATA",3,33.13,9.12,-1.65,0.08,2.76,1.09,0,">1 nonsynonymous","I2Q Y143Q",2
"lib1","SARS-CoV-2","CTTTTAGTTAGCCAAT",1,32.37,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N40A A81F A105D P149H G174D",5
"lib1","SARS-CoV-2","CTTTTATAATAAAGAC",6,5.2,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","G9Q N92P W106Q G116V",4
"lib1","SARS-CoV-2","CTTTTATCATTACACA",2,40.55,8.5,-2.27,0.16,2.18,1.16,0.01,">1 nonsynonymous","T15I N157S",2
"lib1","SARS-CoV-2","CTTTTCAAAAAACGAT",3,77.34,10.72,-0.04,0.07,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","CTTTTCAATACATATG",2,14.8,10.07,-0.69,0.11,2.9,1.03,0.01,">1 nonsynonymous","I2K T15Y K87L",3
"lib1","SARS-CoV-2","CTTTTCACGATAGACA",8,74.42,10.35,-0.42,0.05,2.78,1.01,0,">1 nonsynonymous","D59V Y66S K87Y N171F",4
"lib1","SARS-CoV-2","CTTTTCACTTATTTGG",1,42.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37I T55I F62V G86F R127E",5
"lib1","SARS-CoV-2","CTTTTCAGAGGTGAAA",2,8.63,6.9,-3.86,0.5,1.5,1.11,0.06,">1 nonsynonymous","I104N G152M F167A",3
"lib1","SARS-CoV-2","CTTTTCATACCAGCCA",6,92.73,9.46,-1.31,0.08,2.66,1.1,0,">1 nonsynonymous","S45G Y119T S200P",3
"lib1","SARS-CoV-2","CTTTTCATGACTAAAG",15,221.75,10.76,-0.01,0.05,2.92,1.04,0,">1 nonsynonymous","I2L I142L",2
"lib1","SARS-CoV-2","CTTTTCATTATAGGTC",6,44.32,10.09,-0.68,0.05,2.87,1,0,">1 nonsynonymous","L122V G152W",2
"lib1","SARS-CoV-2","CTTTTCATTCCATGCG",3,139.69,10.64,-0.13,0.05,2.92,1.03,0,"1 nonsynonymous","P7G",1
"lib1","SARS-CoV-2","CTTTTCTAATATAATC",5,23.08,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6G E10V D68M F99G",4
"lib1","SARS-CoV-2","CTTTTGAAAGGAGACG",14,154.45,10.73,-0.04,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","CTTTTGATACATGTGA",10,2.76,NA,NA,NA,NA,NA,NA,"stop","S36H T55* P161Y",3
"lib1","SARS-CoV-2","CTTTTGATTGCGATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16G V32L",2
"lib1","SARS-CoV-2","CTTTTGATTTGATCAA",16,213.61,9.54,-1.22,0.11,1.75,1.13,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","CTTTTGCACACCCGAA",1,0.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128Q",1
"lib1","SARS-CoV-2","CTTTTGCCGAAACACT",2,38.77,9.59,-1.17,0.3,1.5,1,0.05,">1 nonsynonymous","A33N D59V D112L L122K",4
"lib1","SARS-CoV-2","CTTTTGCGCTTGCCTA",1,20.97,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R16F V77D I138E",3
"lib1","SARS-CoV-2","CTTTTGCTACGAAATA",4,72.01,9.33,-1.44,0.16,1.81,1.1,0.01,">1 nonsynonymous","G9Q Y21L C61T",3
"lib1","SARS-CoV-2","CTTTTGCTTTATACGG",8,60.7,7.2,-3.56,0.51,1.5,1.15,0.05,">1 nonsynonymous","C6I D90V",2
"lib1","SARS-CoV-2","CTTTTGGCGGTAACCT",6,0.5,NA,NA,NA,NA,NA,NA,"stop","S29C S45*",2
"lib1","SARS-CoV-2","CTTTTGGCTTTACACA",3,83.95,10.06,-0.7,0.07,2.78,1,0,">1 nonsynonymous","T100I Y121V S200P",3
"lib1","SARS-CoV-2","CTTTTGGGTACCCCTA",2,49.54,9.35,-1.41,0.11,2.05,1.1,0,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","CTTTTGGGTCGAACGG",2,22.25,10.11,-0.66,0.07,2.66,1.04,0,">1 nonsynonymous","Y66R S147A",2
"lib1","SARS-CoV-2","CTTTTGGTTCCAATTG",3,19.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V52S L95T",2
"lib1","SARS-CoV-2","CTTTTGTTAAGCAACG",5,70.84,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","N40H D90N C102Y K198P",4
"lib1","SARS-CoV-2","CTTTTTAAAGCATAGA",1,22,6,-4.76,2,2.33,1.17,0.01,">1 nonsynonymous","Y93S L122H A145Q",3
"lib1","SARS-CoV-2","CTTTTTAAGAACTGGT",4,52.16,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I72F G86N",2
"lib1","SARS-CoV-2","CTTTTTAATCTCACAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F12G R27* S43T",3
"lib1","SARS-CoV-2","CTTTTTACAGGTAACC",6,4.42,NA,NA,NA,NA,NA,NA,"stop","C6* P161I",2
"lib1","SARS-CoV-2","CTTTTTAGCATGAAAT",5,56.18,10.15,-0.61,0.08,2.76,1.07,0,">1 nonsynonymous","A67I Q144H",2
"lib1","SARS-CoV-2","CTTTTTAGTAATTGGC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","T63C K94*",2
"lib1","SARS-CoV-2","CTTTTTATAAACACTA",8,114.84,10.26,-0.51,0.05,2.84,1.01,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","CTTTTTCAAGGAAGGC",9,0.98,NA,NA,NA,NA,NA,NA,"stop","W23* P54M",2
"lib1","SARS-CoV-2","CTTTTTCACCACTTAA",1,21.86,6.86,-3.9,0.61,2.23,1.08,0.07,">1 nonsynonymous","F8D D98E I104T N171T",4
"lib1","SARS-CoV-2","CTTTTTCAGCTGGAGT",3,31.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64Y G83W Y91E P133S F167G",5
"lib1","SARS-CoV-2","CTTTTTCCAGTACAAC",3,52.32,9.55,-1.22,0.09,1.85,1.12,0,">1 nonsynonymous","T3S Q84G D98P E141L P149L",5
"lib1","SARS-CoV-2","CTTTTTCGATACATAA",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134A A192I",2
"lib1","SARS-CoV-2","CTTTTTCTCCCACACA",3,56.32,10.13,-0.64,0.08,2.75,1.07,0,">1 nonsynonymous","D34K P54T",2
"lib1","SARS-CoV-2","CTTTTTCTTCACGCAT",3,0.89,NA,NA,NA,NA,NA,NA,"stop","N4L V37G P54* S113L P133K",5
"lib1","SARS-CoV-2","CTTTTTGACTAAAAAC",1,2.64,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","CTTTTTGAGGACATAG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V Y143Q T148I",3
"lib1","SARS-CoV-2","CTTTTTGGTAAAATCA",2,43.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9Q P82K L95M K128W P149F",5
"lib1","SARS-CoV-2","CTTTTTGGTCTAACCG",1,16.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4S T15M R127M",3
"lib1","SARS-CoV-2","CTTTTTTATTAGCTTC",4,13.19,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I80M Y93T",2
"lib1","SARS-CoV-2","GAAAAAAAAAATTAGT",1,12.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A105E P149N",2
"lib1","SARS-CoV-2","GAAAAAAAAACCTCTG",6,29.49,7.38,-3.39,0.42,1.5,1,0.06,">1 nonsynonymous","T3A L95S L125R",3
"lib1","SARS-CoV-2","GAAAAAAAAACGGTCA",2,68.59,10.47,-0.29,0.05,2.93,1.01,0,">1 nonsynonymous","I2L L57W",2
"lib1","SARS-CoV-2","GAAAAAAAAACTCCAA",6,81.61,10.65,-0.12,0.05,2.92,1.03,0,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","GAAAAAAAAATGAGTA",4,42.2,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G116L I138A Q176K F185Y",4
"lib1","SARS-CoV-2","GAAAAAAAACACATGT",2,11.72,10.09,-0.68,0.17,2.08,1.04,0.01,">1 nonsynonymous","C31L N130T E141Y",3
"lib1","SARS-CoV-2","GAAAAAAAAGCATAAC",3,28.12,6.29,-4.48,0.89,1.5,1.16,0.03,">1 nonsynonymous","G51D F62I C102Q N130Y",4
"lib1","SARS-CoV-2","GAAAAAAAATTAGCCT",6,32.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86L Y91V",2
"lib1","SARS-CoV-2","GAAAAAAACAACGCAG",1,31.37,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S29M S113L C150L",3
"lib1","SARS-CoV-2","GAAAAAAACAGAACAG",2,66.03,8.39,-2.37,0.22,1.65,1.24,0.02,">1 nonsynonymous","T55S A81M Y119M G152H",4
"lib1","SARS-CoV-2","GAAAAAAACATTTAAA",2,59.7,10.44,-0.33,0.07,2.94,1.02,0,">1 nonsynonymous","G116Y P149Q",2
"lib1","SARS-CoV-2","GAAAAAAACGCATTGG",1,25.96,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N1K W106V S113N Y175M",4
"lib1","SARS-CoV-2","GAAAAAAACTTACGAC",5,106.1,10.43,-0.33,0.08,2.83,1.07,0,">1 nonsynonymous","L60F K199N",2
"lib1","SARS-CoV-2","GAAAAAAAGAATCAAA",1,9.79,9.42,-1.34,0.29,1.5,1,0.04,">1 nonsynonymous","C31Q G155Y",2
"lib1","SARS-CoV-2","GAAAAAAAGACCTTTT",1,137.36,10.78,0.01,0.05,2.9,1.07,0,"1 nonsynonymous","K56N",1
"lib1","SARS-CoV-2","GAAAAAAAGAGCCATG",1,26.79,10.46,-0.3,0.13,2.85,1.14,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GAAAAAAAGCCAAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","F17M T63I F134*",3
"lib1","SARS-CoV-2","GAAAAAAATAAATTAA",1,59.9,10.18,-0.59,0.06,2.8,1.03,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","GAAAAAAATAACCGTA",3,43.97,10.72,-0.04,0.07,2.93,1.06,0,">1 nonsynonymous","K48E D98N",2
"lib1","SARS-CoV-2","GAAAAAAATACGCGGG",3,55.48,9.33,-1.44,0.14,1.73,1.06,0.01,">1 nonsynonymous","Y39F N58Y L131F",3
"lib1","SARS-CoV-2","GAAAAAAATCAAATTC",6,36.82,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","T55W L95R",2
"lib1","SARS-CoV-2","GAAAAAAATCAGAGAG",5,160.69,10.72,-0.05,0.05,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAAATGGCCAAA",4,101.42,10.39,-0.38,0.04,2.87,1.03,0,">1 nonsynonymous","G116M K128V",2
"lib1","SARS-CoV-2","GAAAAAAATGTATAAC",4,26.71,9.97,-0.79,0.14,2.01,1.06,0.01,">1 nonsynonymous","N13K K26L A33Q",3
"lib1","SARS-CoV-2","GAAAAAAATGTGCCGC",5,8.71,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S36Y T85C F99V Q144R",4
"lib1","SARS-CoV-2","GAAAAAACACAGATAA",1,27.54,10.75,-0.01,0.11,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAACACCTTACA",3,45.54,8.54,-2.23,0.35,1.5,1.02,0.05,">1 nonsynonymous","V71L A105F T201V",3
"lib1","SARS-CoV-2","GAAAAAACATAACAAA",2,5.45,6.12,-4.64,2,3,1.15,0.04,">1 nonsynonymous","T15W D97R N157I",3
"lib1","SARS-CoV-2","GAAAAAACATCACGAG",2,14.59,6.67,-4.1,0.72,1.5,1.21,0.08,">1 nonsynonymous","T85E N92Q",2
"lib1","SARS-CoV-2","GAAAAAACCACAATCT",2,11.78,6,-4.76,2,1.5,1.28,0.06,"1 nonsynonymous","F99P",1
"lib1","SARS-CoV-2","GAAAAAACCCAGTAAC",6,74.79,10.8,0.03,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAACCCCCAACG",1,31.25,9.94,-0.82,0.12,1.93,1.03,0,">1 nonsynonymous","V65F P133C",2
"lib1","SARS-CoV-2","GAAAAAACCGCCGCCA",2,37.33,6.44,-4.32,0.67,1.5,1.05,0.03,">1 nonsynonymous","V37T P96H F160T Q168K",4
"lib1","SARS-CoV-2","GAAAAAACCGGTCTAA",5,43.46,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","C102E",1
"lib1","SARS-CoV-2","GAAAAAACGTTACAAT",3,33.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14D V52R T63L I72F K87L",5
"lib1","SARS-CoV-2","GAAAAAACTAATCATA",1,12.51,10.66,-0.11,0.08,2.97,1.03,0,">1 nonsynonymous","I2T Q144D K198I",3
"lib1","SARS-CoV-2","GAAAAAACTCCCAACG",4,121.32,10.7,-0.06,0.05,2.94,1.02,0,"1 nonsynonymous","N1C",1
"lib1","SARS-CoV-2","GAAAAAAGAAAAACAA",2,11.91,10.38,-0.39,0.14,2.69,1.11,0.01,">1 nonsynonymous","S29E N40Y",2
"lib1","SARS-CoV-2","GAAAAAAGAAATAACC",2,21.72,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T3S Y93T T100S S113H D137T",5
"lib1","SARS-CoV-2","GAAAAAAGAAATCGCG",2,35.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38T F47S Y119I",3
"lib1","SARS-CoV-2","GAAAAAAGAAGCCGAG",5,34.94,9.42,-1.35,0.19,1.65,1.17,0.02,"1 nonsynonymous","N13P",1
"lib1","SARS-CoV-2","GAAAAAAGAGTTCACT",2,0.42,NA,NA,NA,NA,NA,NA,"stop","S41L Y66A Q84S V153N E154*",5
"lib1","SARS-CoV-2","GAAAAAAGATCATTAG",1,1.58,NA,NA,NA,NA,NA,NA,"stop","L5V G51L T85L R124*",4
"lib1","SARS-CoV-2","GAAAAAAGCCCGTAAT",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Q R124P T201R",3
"lib1","SARS-CoV-2","GAAAAAAGCGGTATAC",8,77.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y93P G101T G196R",3
"lib1","SARS-CoV-2","GAAAAAAGCTTTCTAA",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70M K128T Q144Y N157K Y178L",5
"lib1","SARS-CoV-2","GAAAAAAGGCAGCTGA",6,59.75,10.7,-0.07,0.1,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAAGGGATGGTA",1,39.05,10.75,-0.01,0.09,2.95,1.03,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","GAAAAAAGTAGACCAA",4,40.63,8.65,-2.12,0.17,2.04,1.16,0.01,">1 nonsynonymous","C6P F62S E154D",3
"lib1","SARS-CoV-2","GAAAAAATACAAATCT",3,66.76,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T15P C158D",2
"lib1","SARS-CoV-2","GAAAAAATATCCGAAT",2,6.97,10.61,-0.15,0.22,3,1.07,0.01,">1 nonsynonymous","Y39K P54M P197V",3
"lib1","SARS-CoV-2","GAAAAAATATTTAGAA",9,71.26,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T85W D98M W106T",3
"lib1","SARS-CoV-2","GAAAAAATCGTCGATA",3,1.62,NA,NA,NA,NA,NA,NA,"stop","F8Y G74T I80* D97G N120L E141V P149R",7
"lib1","SARS-CoV-2","GAAAAAATCTCCAAGC",1,0.45,NA,NA,NA,NA,NA,NA,"stop","A14L F99H S129A G166L Y178L K199*",6
"lib1","SARS-CoV-2","GAAAAAATGACCGGTA",4,10.69,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G51D P96W",2
"lib1","SARS-CoV-2","GAAAAAATGACTGCCT",2,14.17,10.81,0.04,0.06,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAATGGCCCGAT",3,84.29,8.18,-2.58,0.16,1.69,1.13,0.01,">1 nonsynonymous","F160E Q176W",2
"lib1","SARS-CoV-2","GAAAAAATGGTGTATC",10,73.46,9.58,-1.19,0.15,1.77,1.11,0.01,">1 nonsynonymous","N1V F8V S29I",3
"lib1","SARS-CoV-2","GAAAAAATGTATGCAG",11,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K F47M K114L Q168E",4
"lib1","SARS-CoV-2","GAAAAAATTACAAAAT",1,34.17,8.68,-2.09,0.27,1.5,1,0.04,">1 nonsynonymous","I2S F8R P54S Y123L S147P",5
"lib1","SARS-CoV-2","GAAAAAATTACGTTTA",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M W23S F70L S113C F134G",5
"lib1","SARS-CoV-2","GAAAAAATTGAGCTTG",6,0.42,NA,NA,NA,NA,NA,NA,"stop","D97* S113A R136S",3
"lib1","SARS-CoV-2","GAAAAAATTGGAACCA",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F A81K",2
"lib1","SARS-CoV-2","GAAAAAATTTTGCGCC",3,14.2,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C31E G101S S113P L131M C150W P197R",6
"lib1","SARS-CoV-2","GAAAAACAAAACATTA",2,76.64,10.8,0.03,0.1,2.88,1.09,0,">1 nonsynonymous","F160R K199Q",2
"lib1","SARS-CoV-2","GAAAAACAAAATAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G74* N118L N130F T148S R179E",5
"lib1","SARS-CoV-2","GAAAAACAAACTCCAT",2,23.51,10.16,-0.61,0.11,2.58,1,0.01,">1 nonsynonymous","D97M L122K T170Y",3
"lib1","SARS-CoV-2","GAAAAACAAAGGCCGT",24,69.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W A42D A81R A89W",4
"lib1","SARS-CoV-2","GAAAAACAACCGTCCT",2,11.13,10.73,-0.04,0.05,2.99,1,0,"1 nonsynonymous","N24G",1
"lib1","SARS-CoV-2","GAAAAACAATTGGGAT",9,126.55,9.6,-1.16,0.07,2.67,1.08,0,">1 nonsynonymous","N13H Q84S K87T N107P",4
"lib1","SARS-CoV-2","GAAAAACACCCTAGCA",3,79.84,8.71,-2.06,0.11,2.86,1.07,0.01,">1 nonsynonymous","S113V L122Y S129N",3
"lib1","SARS-CoV-2","GAAAAACACGATAGAA",8,111.36,6.19,-4.58,0.73,1.5,1.21,0.02,">1 nonsynonymous","D112V Y121V",2
"lib1","SARS-CoV-2","GAAAAACACGGTCTCT",4,25.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35S D112L T140P",3
"lib1","SARS-CoV-2","GAAAAACAGTAAAGTC",4,83.94,10.17,-0.59,0.08,2.57,1.06,0,">1 nonsynonymous","D97L S139C P149T",3
"lib1","SARS-CoV-2","GAAAAACATAGGTTAT",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S N92L N107V",3
"lib1","SARS-CoV-2","GAAAAACCATTCATAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y39S T85* K87S K114E N120S",5
"lib1","SARS-CoV-2","GAAAAACCGGCTAGGA",3,45.7,6,-4.76,1.23,1.5,1.17,0.01,">1 nonsynonymous","S45I L57S G83R D97H E141A",5
"lib1","SARS-CoV-2","GAAAAACCTTTGCGTT",1,45.49,10.63,-0.13,0.09,2.8,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAACGTAAGTAAA",3,34.18,8.99,-1.78,0.23,1.77,1.13,0.02,">1 nonsynonymous","T55S N107V P149T",3
"lib1","SARS-CoV-2","GAAAAACGTGGTCGAA",3,105.1,10.7,-0.07,0.06,2.89,1.04,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","GAAAAACGTTGTTACA",4,0.61,NA,NA,NA,NA,NA,NA,"stop","S41* Y121R G146Y",3
"lib1","SARS-CoV-2","GAAAAACTAAAAACAC",10,166.37,10.15,-0.62,0.04,2.89,1.02,0,">1 nonsynonymous","T55Y P161S",2
"lib1","SARS-CoV-2","GAAAAACTAAACTGAA",4,55.48,9.52,-1.25,0.18,1.74,1.15,0.01,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","GAAAAACTATCATATA",5,2.25,NA,NA,NA,NA,NA,NA,"stop","C49P K87N I88S G152H Q168*",5
"lib1","SARS-CoV-2","GAAAAACTCATAATAG",4,34.25,10.46,-0.31,0.1,2.9,1.04,0,">1 nonsynonymous","G9L K128S",2
"lib1","SARS-CoV-2","GAAAAACTTCCCTGTT",3,33.27,10.76,0,0.09,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAACTTGGCACAG",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G I104K R124D Q168I",4
"lib1","SARS-CoV-2","GAAAAAGATTCAATTA",17,147.76,10.67,-0.09,0.06,2.91,1.07,0,"1 nonsynonymous","N64C",1
"lib1","SARS-CoV-2","GAAAAAGATTGTATAT",2,9.45,NA,NA,NA,NA,NA,0.21,"1 nonsynonymous","L95N",1
"lib1","SARS-CoV-2","GAAAAAGCACCAAAAT",1,20.96,10.37,-0.39,0.11,2.88,1,0.01,">1 nonsynonymous","F12I T140F",2
"lib1","SARS-CoV-2","GAAAAAGCATAAGTCT",6,8.22,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","L57F L122N G152N L183S",4
"lib1","SARS-CoV-2","GAAAAAGCCAACATAA",5,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A C102Y A105M S200R",4
"lib1","SARS-CoV-2","GAAAAAGCTAATCGTT",12,154.02,9.59,-1.17,0.09,2.38,1.07,0,">1 nonsynonymous","N107K S139G",2
"lib1","SARS-CoV-2","GAAAAAGCTACCCAAA",2,22.51,7.94,-2.82,0.25,1.5,1.26,0.03,">1 nonsynonymous","I2E G86M",2
"lib1","SARS-CoV-2","GAAAAAGCTATTCGGA",3,2.79,NA,NA,NA,NA,NA,NA,"stop","N1* F156S L187P",3
"lib1","SARS-CoV-2","GAAAAAGCTCATTGAG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","R16L V52T E135* Q176R",4
"lib1","SARS-CoV-2","GAAAAAGCTTTAAACC",1,58.03,10.16,-0.61,0.09,2.55,1,0,">1 nonsynonymous","V52S F62L L122R V173P",4
"lib1","SARS-CoV-2","GAAAAAGGAGCTGCCG",2,27.45,6.79,-3.97,0.37,1.5,1.19,0.02,">1 nonsynonymous","F17H A42T W106S K198A",4
"lib1","SARS-CoV-2","GAAAAAGGGACTCCAA",5,201.86,9.57,-1.2,0.1,2.58,1.06,0,">1 nonsynonymous","S53G N64S S164I",3
"lib1","SARS-CoV-2","GAAAAAGGTGAAACCA",1,18.18,10.51,-0.25,0.12,2.85,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAAGTCGATTATA",2,10.81,10.38,-0.39,0.1,2.98,1.02,0,">1 nonsynonymous","T15Y S41N",2
"lib1","SARS-CoV-2","GAAAAAGTGTTAATCA",1,15.42,10.94,0.17,0.17,2.92,1,0.02,"1 nonsynonymous","L5N",1
"lib1","SARS-CoV-2","GAAAAAGTTAATAAAA",6,134.54,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27Q P149L F160N Q176P",4
"lib1","SARS-CoV-2","GAAAAAGTTGGGACAG",1,36.24,10.75,-0.02,0.04,2.92,1.02,0,">1 nonsynonymous","V65I S147L",2
"lib1","SARS-CoV-2","GAAAAATAACCAGCAG",5,29.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","GAAAAATAACTCGGGA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I S139L",2
"lib1","SARS-CoV-2","GAAAAATACAACAAAA",3,8.32,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y21I G83R D90N V103S T148S",5
"lib1","SARS-CoV-2","GAAAAATAGAGTCTAA",1,16.89,8.18,-2.58,0.24,1.93,1.14,0.03,">1 nonsynonymous","F8S N107P K114R",3
"lib1","SARS-CoV-2","GAAAAATAGGAGAACA",1,38.3,9.26,-1.51,0.1,2.83,1.16,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GAAAAATAGGGTCTAA",6,15.62,7.02,-3.75,0.4,1.87,1.32,0.03,">1 nonsynonymous","N1R I104N",2
"lib1","SARS-CoV-2","GAAAAATATCCAAATA",5,22.44,8.89,-1.87,0.21,1.5,1.14,0.02,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","GAAAAATATGAATTTC",1,5.07,6.22,-4.54,0.98,3,1,0,">1 nonsynonymous","V77G R136F S147T",3
"lib1","SARS-CoV-2","GAAAAATATTACCACT",2,0.25,NA,NA,NA,NA,NA,NA,"stop","C6S A14S Y39G C102A N107* N120S",6
"lib1","SARS-CoV-2","GAAAAATCAACGTTCT",3,39.06,8.69,-2.07,0.14,2.03,1.1,0.01,">1 nonsynonymous","P133I T170R",2
"lib1","SARS-CoV-2","GAAAAATCACCATCTA",5,56.55,10.61,-0.16,0.04,2.94,1.04,0,">1 nonsynonymous","I2H F134S",2
"lib1","SARS-CoV-2","GAAAAATCATTCATGG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","C6M Y123*",2
"lib1","SARS-CoV-2","GAAAAATCCAAAAAAC",1,70.59,10.01,-0.75,0.05,2.9,1.01,0,"1 nonsynonymous","I142W",1
"lib1","SARS-CoV-2","GAAAAATCCCAACCAA",8,89.98,9.62,-1.15,0.17,1.64,1.1,0.01,"1 nonsynonymous","Y50N",1
"lib1","SARS-CoV-2","GAAAAATCTCGAAAAA",4,47.29,7.99,-2.77,0.14,2,1.18,0.01,">1 nonsynonymous","P54V D112T N120K",3
"lib1","SARS-CoV-2","GAAAAATCTTACATGT",5,92.17,9.94,-0.83,0.05,2.78,1.04,0,">1 nonsynonymous","V115H G152I",2
"lib1","SARS-CoV-2","GAAAAATCTTTCAAAC",3,118.04,9.29,-1.47,0.04,2.85,1.1,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GAAAAATGACGTCATT",8,58.42,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y21D R27F S139F",3
"lib1","SARS-CoV-2","GAAAAATGAGATTGCA",3,15.74,8.6,-2.16,0.2,2.5,1,0.02,">1 nonsynonymous","N4R N109P",2
"lib1","SARS-CoV-2","GAAAAATGAGCTGATA",6,88.48,9.74,-1.02,0.12,1.89,1.11,0.01,">1 nonsynonymous","A14R Q79R T148E",3
"lib1","SARS-CoV-2","GAAAAATGATCAGCAA",1,13.63,9.39,-1.38,0.08,2.86,1.07,0,">1 nonsynonymous","N109F P149N T201C",3
"lib1","SARS-CoV-2","GAAAAATGTTTCACAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","I28* L60H G74H R124Y C150*",5
"lib1","SARS-CoV-2","GAAAAATTAGACACTA",8,79.9,10.39,-0.37,0.05,2.91,1.04,0,">1 nonsynonymous","G116Y S129R",2
"lib1","SARS-CoV-2","GAAAAATTATGCATTG",4,91.82,10.84,0.07,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAATTCAATGATG",7,88.45,9.18,-1.59,0.11,2.09,1.14,0.01,">1 nonsynonymous","C61V Y121R",2
"lib1","SARS-CoV-2","GAAAAATTGAAAAGAA",2,66.03,10.87,0.11,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAATTTGCTATTA",9,164.87,10.84,0.07,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAACAAAACGTTGG",1,18.41,9.82,-0.94,0.12,2.59,1.05,0.01,">1 nonsynonymous","A33S T63M D90A S200K",4
"lib1","SARS-CoV-2","GAAAACAAAAGTTAAA",6,95.99,10.76,0,0.06,2.98,1,0,"1 nonsynonymous","S139G",1
"lib1","SARS-CoV-2","GAAAACAAACGTAAGT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","P7K A14I K56* A105E",4
"lib1","SARS-CoV-2","GAAAACAAATACGTCT",3,26.69,10.53,-0.24,0.06,2.94,1,0,">1 nonsynonymous","K56F V65L",2
"lib1","SARS-CoV-2","GAAAACAAATATTACA",4,9.15,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","P82L D90N K114P",3
"lib1","SARS-CoV-2","GAAAACAACAAAAGGC",13,16.47,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1R P7M S41F L57P G86K I104L",6
"lib1","SARS-CoV-2","GAAAACAACGGAGAAC",4,49.41,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y39T L95Y G101F Y119F F156W",5
"lib1","SARS-CoV-2","GAAAACAATCCACCGA",6,12.6,10.43,-0.34,0.06,2.95,1,0,"1 nonsynonymous","I80L",1
"lib1","SARS-CoV-2","GAAAACAATGGCTGAT",2,22.03,10.1,-0.67,0.07,2.96,1,0,">1 nonsynonymous","D97K Y143H F156H",3
"lib1","SARS-CoV-2","GAAAACAATTAAAAAA",1,22.34,6.58,-4.18,0.7,1.5,1.19,0.06,">1 nonsynonymous","N4M N13I S19V Y35K P54S V103T",6
"lib1","SARS-CoV-2","GAAAACACAGTTCAGC",6,68.3,10.71,-0.05,0.04,2.91,1.03,0,"1 nonsynonymous","R16L",1
"lib1","SARS-CoV-2","GAAAACACCAACATCG",6,58.25,9.3,-1.47,0.09,2.9,1.09,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","GAAAACACCATAGAAA",1,8.29,9.84,-0.92,0.12,1.82,1.01,0.01,">1 nonsynonymous","L57E A89P",2
"lib1","SARS-CoV-2","GAAAACACCTTGCTCT",4,98.34,10.83,0.07,0.09,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAAACACGCCTTCAG",5,2.15,NA,NA,NA,NA,NA,NA,"stop","L5* K94Q N118A",3
"lib1","SARS-CoV-2","GAAAACACGTATAACA",2,4.99,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAAAACACTATTGAAT",4,30.71,10.77,0.01,0.07,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAAACACTTCACGAA",8,198.72,10.75,-0.01,0.06,2.87,1.04,0,">1 nonsynonymous","T3C S41T T55S Y175W",4
"lib1","SARS-CoV-2","GAAAACAGAGTCCGAA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","A14V F99T A105D Y121Q K128* S139Y R179S",7
"lib1","SARS-CoV-2","GAAAACAGAGTTAAAG",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I C150N",2
"lib1","SARS-CoV-2","GAAAACAGGTAAGTCT",3,64.56,9.98,-0.79,0.1,2.53,1.04,0,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","GAAAACATCCTTCGAG",10,149.66,10.68,-0.08,0.06,2.92,1.05,0,">1 nonsynonymous","F160N V173L",2
"lib1","SARS-CoV-2","GAAAACATCGAACTAA",3,86.18,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C31H D90L G146I",3
"lib1","SARS-CoV-2","GAAAACATCGCACATT",8,62.85,10.73,-0.03,0.07,2.91,1.05,0,"1 nonsynonymous","N40G",1
"lib1","SARS-CoV-2","GAAAACATCGTATACG",2,47.84,10.38,-0.38,0.05,2.81,1.03,0,"1 nonsynonymous","G152V",1
"lib1","SARS-CoV-2","GAAAACATTGATATAG",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V R136S F160C",3
"lib1","SARS-CoV-2","GAAAACATTGGGTTCT",1,27.53,10.66,-0.11,0.08,2.94,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAAAACATTTCCATAT",4,84.64,8.35,-2.42,0.2,1.5,1.07,0.02,">1 nonsynonymous","F17D R27L",2
"lib1","SARS-CoV-2","GAAAACCACTAAGTTG",2,29.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K56T A67Y G86P",3
"lib1","SARS-CoV-2","GAAAACCACTAAGTTT",1,12.36,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","D112P K132V",2
"lib1","SARS-CoV-2","GAAAACCAGATAGTAC",2,36.91,10.76,0,0.08,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAACCCCCCTTTCA",7,19.45,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","N1R R16M Y50P D59V V103W P149S",6
"lib1","SARS-CoV-2","GAAAACCCGAAGATGT",4,0.7,NA,NA,NA,NA,NA,NA,"stop","P7T V37Y G174* A192C",4
"lib1","SARS-CoV-2","GAAAACCCGAATAGTT",3,41.02,7.1,-3.66,0.33,1.77,1.24,0.03,">1 nonsynonymous","A42T V65M R127D",3
"lib1","SARS-CoV-2","GAAAACCTAAGCACAC",11,65.36,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C61Q I88T I104Q",3
"lib1","SARS-CoV-2","GAAAACCTATGACGGC",2,49.32,10.76,0,0.08,2.84,1.1,0,"1 nonsynonymous","P197Q",1
"lib1","SARS-CoV-2","GAAAACCTCCAGATGC",1,18.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D98P W106T S200T",3
"lib1","SARS-CoV-2","GAAAACCTCCCTGGAG",2,125.2,9.87,-0.9,0.04,2.84,1.03,0,">1 nonsynonymous","T3V G155S G174K",3
"lib1","SARS-CoV-2","GAAAACCTCGCCGGGC",6,119.65,9.5,-1.26,0.06,2.87,1.07,0,"1 nonsynonymous","S113C",1
"lib1","SARS-CoV-2","GAAAACCTCTAGCGAT",1,15.44,9.39,-1.37,0.27,1.66,1.13,0.03,">1 nonsynonymous","C49V S139G",2
"lib1","SARS-CoV-2","GAAAACGAAAATACAT",3,90.4,9.72,-1.05,0.06,2.81,1.09,0,">1 nonsynonymous","I142E K199S",2
"lib1","SARS-CoV-2","GAAAACGAAACAATAA",4,57.16,6.07,-4.69,1.06,1.5,1.22,0.03,">1 nonsynonymous","I2S N24R G152S Y165E",4
"lib1","SARS-CoV-2","GAAAACGATCTAAAGT",3,1.61,NA,NA,NA,NA,NA,NA,"stop","K56S G116* S129Y H189Y",4
"lib1","SARS-CoV-2","GAAAACGATGATAAAA",3,55.24,9.84,-0.92,0.1,1.95,1.08,0,">1 nonsynonymous","F44L D98V L111R",3
"lib1","SARS-CoV-2","GAAAACGCAAAGTACA",2,32.03,10.61,-0.16,0.21,2.81,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAAAACGCGCGGCAAA",1,19.33,8.45,-2.31,0.15,2.15,1.07,0.01,">1 nonsynonymous","D112M T201Q",2
"lib1","SARS-CoV-2","GAAAACGGAAAGTAGT",4,57.61,8.47,-2.29,0.18,2.01,1.19,0.01,">1 nonsynonymous","I2K S45K S108T G117N",4
"lib1","SARS-CoV-2","GAAAACGGTCCACTTT",1,6.91,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","W23K W106A",2
"lib1","SARS-CoV-2","GAAAACGTAATTGGAC",10,112.08,10.65,-0.12,0.05,2.89,1.04,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","GAAAACGTAGAACGGA",2,32.65,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T63F F99T I104E",3
"lib1","SARS-CoV-2","GAAAACTAAATTTAGT",3,25.01,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A18M S41N G83H L162S K198G",5
"lib1","SARS-CoV-2","GAAAACTAATTGGCAC",14,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101K S139R",2
"lib1","SARS-CoV-2","GAAAACTAATTTGAGA",1,1.48,NA,NA,NA,NA,NA,NA,"stop","F12S I28* T85D K128L V153L C195L",6
"lib1","SARS-CoV-2","GAAAACTACAATGCAG",2,0.45,NA,NA,NA,NA,NA,NA,"stop","G86T N92L K114R Y119P Q163*",5
"lib1","SARS-CoV-2","GAAAACTAGATTGAAG",3,38.94,10.84,0.08,0.08,2.93,1.02,0,">1 nonsynonymous","T55L L111V",2
"lib1","SARS-CoV-2","GAAAACTAGCACTGAA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","V65*",1
"lib1","SARS-CoV-2","GAAAACTAGCAGTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","D97* N151E",2
"lib1","SARS-CoV-2","GAAAACTATCCATGTG",3,105.3,6.14,-4.63,0.63,1.5,1.18,0.01,">1 nonsynonymous","Y143S V180M",2
"lib1","SARS-CoV-2","GAAAACTCACACAATA",5,78.01,10.13,-0.64,0.04,2.9,1.01,0,">1 nonsynonymous","F12L V115S T148V",3
"lib1","SARS-CoV-2","GAAAACTCACCTTCGA",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152T G172W",2
"lib1","SARS-CoV-2","GAAAACTCCTGTAAAG",1,49.3,10.15,-0.61,0.06,2.91,1.03,0,"1 nonsynonymous","V65R",1
"lib1","SARS-CoV-2","GAAAACTCGCTGAGCA",7,27.34,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T3K L5R S29L V103T Y165D",5
"lib1","SARS-CoV-2","GAAAACTGATTCATTG",5,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","GAAAACTTCAAACCAA",5,158.97,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R73W Q176H",2
"lib1","SARS-CoV-2","GAAAACTTCAAGTCAA",2,28.49,6.7,-4.07,0.38,1.76,1.12,0.02,">1 nonsynonymous","I2P R16N Y93L C150S",4
"lib1","SARS-CoV-2","GAAAACTTCGCGACTA",5,29.72,10.75,-0.01,0.07,2.85,1.08,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","GAAAACTTTAGTAGCA",1,5.05,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","G116V Q144V T170I",3
"lib1","SARS-CoV-2","GAAAACTTTATTAGTT",3,17.29,6,-4.76,2,3,1.11,0.01,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","GAAAAGAAAACATAAA",8,132.96,8.27,-2.5,0.16,1.5,1.13,0.01,">1 nonsynonymous","I28N G83R Y121L",3
"lib1","SARS-CoV-2","GAAAAGAAAAGAACAA",5,56.43,10.8,0.04,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAAGAAAAGCTAAG",10,2.4,NA,NA,NA,NA,NA,NA,"stop","V20L F44* P82F A89F D97T C158N Y175Q",7
"lib1","SARS-CoV-2","GAAAAGAACCGTCATA",1,42.72,10.45,-0.31,0.06,2.92,1.03,0,">1 nonsynonymous","S53V G116I T201R",3
"lib1","SARS-CoV-2","GAAAAGAACGTCCAAG",2,40.07,6.54,-4.23,0.64,1.5,1.1,0.05,">1 nonsynonymous","C6L G146R Q176E",3
"lib1","SARS-CoV-2","GAAAAGAATCAATATA",4,89.52,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","V11D A33P K48V V65T D112K N151W",6
"lib1","SARS-CoV-2","GAAAAGACAAGGTATT",2,37.02,10.51,-0.26,0.04,2.92,1.06,0,">1 nonsynonymous","C61I N151R N171Q",3
"lib1","SARS-CoV-2","GAAAAGACCATCACTA",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N P96N Y119H G174C",4
"lib1","SARS-CoV-2","GAAAAGACGTTTTACC",13,221.74,10.72,-0.04,0.06,2.88,1.06,0,">1 nonsynonymous","D75K L122E",2
"lib1","SARS-CoV-2","GAAAAGACTTGATAAC",5,4.33,NA,NA,NA,NA,NA,NA,"stop","K26* K128V Q176W",3
"lib1","SARS-CoV-2","GAAAAGAGATAATCGC",4,52.19,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8N R124T",2
"lib1","SARS-CoV-2","GAAAAGAGTGCATCAT",5,81.39,10.62,-0.14,0.06,2.89,1,0,">1 nonsynonymous","S41W D97K T148N",3
"lib1","SARS-CoV-2","GAAAAGATAAAATGGG",5,38.54,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A89L N109L G116Q",3
"lib1","SARS-CoV-2","GAAAAGATAATTCAAA",3,37.64,10.55,-0.21,0.06,2.95,1.02,0,">1 nonsynonymous","N64F E141T",2
"lib1","SARS-CoV-2","GAAAAGATCCTTACCC",3,56.49,8.16,-2.61,0.28,1.5,1.08,0.03,">1 nonsynonymous","G51R D97A P161C",3
"lib1","SARS-CoV-2","GAAAAGATCTTGCACA",8,29.34,7.14,-3.63,0.36,1.5,1.12,0.04,">1 nonsynonymous","I28A A42P T55I C61T L95Q T201G",6
"lib1","SARS-CoV-2","GAAAAGATTATCTGAA",3,3.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","GAAAAGCAACCATTGA",8,156.87,10.83,0.06,0.07,2.93,1.04,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","GAAAAGCACGACATTA",6,8.62,10.19,-0.57,0.18,2.23,1.01,0.01,">1 nonsynonymous","A42N A89T L95T L122R",4
"lib1","SARS-CoV-2","GAAAAGCCCGGGGCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T R124L Y143L",3
"lib1","SARS-CoV-2","GAAAAGCCTTAAAATA",2,18.45,6.27,-4.5,0.47,1.5,1.05,0.01,">1 nonsynonymous","S41N N107H Y143E",3
"lib1","SARS-CoV-2","GAAAAGCGTCTCCAGC",1,16.15,6.06,-4.7,1.51,1.5,1.22,0.07,">1 nonsynonymous","A89M D137Q",2
"lib1","SARS-CoV-2","GAAAAGCTGATAAAAC",8,109.75,10.78,0.02,0.06,2.93,1.04,0,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","GAAAAGGACAATCTAA",3,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70H K94Q",2
"lib1","SARS-CoV-2","GAAAAGGAGAATAACA",2,29.17,10.58,-0.19,0.08,2.92,1,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","GAAAAGGAGACGACTA",3,303.75,10.72,-0.05,0.06,2.92,1.04,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","GAAAAGGAGACTAAAT",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H Y66G G83D D90H",4
"lib1","SARS-CoV-2","GAAAAGGAGATAGCGA",2,52.14,10.76,0,0.04,2.94,1.02,0,"1 nonsynonymous","P197A",1
"lib1","SARS-CoV-2","GAAAAGGCTAATACAA",2,38.08,9.04,-1.72,0.26,1.6,1.23,0.03,"1 nonsynonymous","F17N",1
"lib1","SARS-CoV-2","GAAAAGGGGAAACACT",1,24.47,10.03,-0.73,0.1,2.1,1.05,0,"1 nonsynonymous","T46P",1
"lib1","SARS-CoV-2","GAAAAGGTACAAAATT",9,62.98,10.46,-0.31,0.06,2.92,1,0,">1 nonsynonymous","S41I Q84C",2
"lib1","SARS-CoV-2","GAAAAGGTGGAAATCC",3,35.69,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","E10W S19L N107T G152F A192T",5
"lib1","SARS-CoV-2","GAAAAGTAAAGCGGTA",17,413.53,8.84,-1.92,0.06,2.56,1.11,0,">1 nonsynonymous","A33L A105T N110I K128V F156N",5
"lib1","SARS-CoV-2","GAAAAGTACAAGCACA",2,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G Y119T",2
"lib1","SARS-CoV-2","GAAAAGTACACTGCGA",2,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G C158I V173P",3
"lib1","SARS-CoV-2","GAAAAGTATAGACGAC",4,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58F L131Y",2
"lib1","SARS-CoV-2","GAAAAGTATCAGGGTC",8,60.94,10.26,-0.5,0.05,2.85,1,0,">1 nonsynonymous","T85P V173C",2
"lib1","SARS-CoV-2","GAAAAGTATCTTCCTT",1,0.87,NA,NA,NA,NA,NA,NA,"stop","E10L A18E N58I K87* Q168W",5
"lib1","SARS-CoV-2","GAAAAGTCAAAACGCG",5,16.39,6.08,-4.69,0.83,1.5,1.16,0.01,">1 nonsynonymous","S19G S113L Y119D G146S",4
"lib1","SARS-CoV-2","GAAAAGTCATCCCCAA",2,71.76,10.78,0.01,0.07,2.91,1.05,0,"1 nonsynonymous","L188F",1
"lib1","SARS-CoV-2","GAAAAGTGAAAAACTA",2,19.67,10.91,0.15,0.11,2.84,1.12,0,">1 nonsynonymous","V173R S200T",2
"lib1","SARS-CoV-2","GAAAAGTGCATAATTA",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A L183P",2
"lib1","SARS-CoV-2","GAAAAGTGCTCTAAAA",2,72.81,10.04,-0.72,0.08,2.47,1.02,0,">1 nonsynonymous","I80L T140G",2
"lib1","SARS-CoV-2","GAAAAGTTCACTCAAA",1,38.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8N D68G Y119P G155H S200Y",5
"lib1","SARS-CoV-2","GAAAATAAAACTGACA",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F G83S I138L S184F",4
"lib1","SARS-CoV-2","GAAAATAAACTTAACT",2,155.99,10.67,-0.09,0.05,2.81,1.05,0,">1 nonsynonymous","F44M G152N Q168Y",3
"lib1","SARS-CoV-2","GAAAATAAAGTAAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L K87P D98K L122G R136P C158M",6
"lib1","SARS-CoV-2","GAAAATAAAGTTTAAT",12,179.28,8.31,-2.45,0.12,1.66,1.11,0.01,">1 nonsynonymous","I28A T55S G146R",3
"lib1","SARS-CoV-2","GAAAATAAATACCAAG",3,56.13,6,-4.76,2,3,1.21,0,">1 nonsynonymous","I28P S45C R124S",3
"lib1","SARS-CoV-2","GAAAATAAATGCCTAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","R16L D34H K87* D97Q",4
"lib1","SARS-CoV-2","GAAAATAACGAAATAG",1,12.54,9.25,-1.52,0.13,2.75,1.17,0.01,"1 nonsynonymous","N118P",1
"lib1","SARS-CoV-2","GAAAATAACGGGATCG",6,48.66,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L5C Y91T R136M",3
"lib1","SARS-CoV-2","GAAAATAAGGTCCGCA",6,139.43,10.8,0.03,0.06,2.95,1.03,0,">1 nonsynonymous","I2G V173I",2
"lib1","SARS-CoV-2","GAAAATAATGTTGACG",4,1.1,NA,NA,NA,NA,NA,NA,"stop","C61* W106V Y119N",3
"lib1","SARS-CoV-2","GAAAATAATTATACTT",6,49.08,10.78,0.01,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAATACAAACGAGG",3,42.47,10.61,-0.15,0.07,2.89,1.05,0,">1 nonsynonymous","L5R D75Q",2
"lib1","SARS-CoV-2","GAAAATACAAAGACAA",4,17.71,6,-4.76,2,1.5,1.21,0.04,"1 nonsynonymous","L95W",1
"lib1","SARS-CoV-2","GAAAATACAGATCCAT",4,56.83,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6I F44S D90T R124S K132A",5
"lib1","SARS-CoV-2","GAAAATACATAGTCAA",2,54.63,9.95,-0.81,0.1,2.05,1.14,0,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","GAAAATACCCAAAATC",4,18.26,6,-4.76,1.59,1.5,1.15,0.02,">1 nonsynonymous","Q176H V181P",2
"lib1","SARS-CoV-2","GAAAATACGACACTAA",1,1.97,NA,NA,NA,NA,NA,NA,"stop","T3P R27T G86* A105S V173G T201Y",6
"lib1","SARS-CoV-2","GAAAATACTAAATGTT",5,23.57,10.87,0.11,0.09,2.92,1.04,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","GAAAATACTAAGATAG",1,12.26,10.62,-0.14,0.08,3,1.03,0,"1 nonsynonymous","A33G",1
"lib1","SARS-CoV-2","GAAAATACTGAATATT",3,42.25,10.27,-0.49,0.07,2.91,1.02,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","GAAAATACTGACGTTC",2,2.02,NA,NA,NA,NA,NA,NA,"stop","Y35* G86* F99C",3
"lib1","SARS-CoV-2","GAAAATACTTGTAACC",20,151.01,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","I80F Q168K",2
"lib1","SARS-CoV-2","GAAAATAGAAGATAAT",3,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I A105P T148D",3
"lib1","SARS-CoV-2","GAAAATAGAATAACTT",10,153.83,9.58,-1.18,0.11,2.02,1.09,0.01,">1 nonsynonymous","Y35H T85C K114S",3
"lib1","SARS-CoV-2","GAAAATAGACGATACA",1,20.19,6,-4.76,1.28,1.75,1.18,0.02,">1 nonsynonymous","C31N V103H",2
"lib1","SARS-CoV-2","GAAAATAGCCAGGTAG",1,18.99,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P54C Q84R D90I R127E",4
"lib1","SARS-CoV-2","GAAAATAGGCCGAAGG",1,4.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50A",1
"lib1","SARS-CoV-2","GAAAATATACTTGTTT",2,18.51,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","S41L N107T G116T L188M",4
"lib1","SARS-CoV-2","GAAAATATAGGCATTG",13,499.27,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14L N30L K87G G116I R136F G146V K198H",7
"lib1","SARS-CoV-2","GAAAATATCATGTGTT",12,250.7,10.76,0,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAATATCGCTCAAT",3,38.98,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y50T T55Q G101I N120M",4
"lib1","SARS-CoV-2","GAAAATATGAGGTATA",8,104.48,10.35,-0.41,0.04,2.88,1.05,0,">1 nonsynonymous","L5M A81R L122N",3
"lib1","SARS-CoV-2","GAAAATATGAGTGTGT",1,25.41,10.82,0.06,0.06,2.92,1.07,0,"1 nonsynonymous","S29V",1
"lib1","SARS-CoV-2","GAAAATATGCCCCTAT",2,51.09,10.75,-0.02,0.08,2.86,1.1,0,"1 nonsynonymous","K48R",1
"lib1","SARS-CoV-2","GAAAATCAAAACCAGC",12,106.56,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I28K Y165L T201A",3
"lib1","SARS-CoV-2","GAAAATCAAAGACATA",10,87.89,6,-4.76,1.51,1.5,1.15,0.02,">1 nonsynonymous","K94T E135P",2
"lib1","SARS-CoV-2","GAAAATCAAATATTTT",1,9.89,10.53,-0.23,0.11,3,1,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","GAAAATCAAGTCAAAA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","N92W L122*",2
"lib1","SARS-CoV-2","GAAAATCAATCACAAT",3,47.58,10.13,-0.63,0.05,2.86,1.05,0,">1 nonsynonymous","L57M Y91L",2
"lib1","SARS-CoV-2","GAAAATCAATCACTCT",1,25.51,7.1,-3.66,0.17,1.5,1.1,0.01,"1 nonsynonymous","R179S",1
"lib1","SARS-CoV-2","GAAAATCACACGAGAG",1,5.53,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","I104D R179I",2
"lib1","SARS-CoV-2","GAAAATCATCGACACT",3,20.32,10.47,-0.29,0.08,2.89,1,0.01,">1 nonsynonymous","P96G N110D L122V",3
"lib1","SARS-CoV-2","GAAAATCCAAAAACAG",9,17.72,6.93,-3.83,0.38,1.5,1.07,0.04,">1 nonsynonymous","G101L Y119R",2
"lib1","SARS-CoV-2","GAAAATCCACAGATAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N F62R D98M",3
"lib1","SARS-CoV-2","GAAAATCCATCGTACC",1,22.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35E S53Q P82R G146A",4
"lib1","SARS-CoV-2","GAAAATCCGGTTATTG",8,136.33,8.48,-2.29,0.24,1.5,1.08,0.03,">1 nonsynonymous","W106R V180M",2
"lib1","SARS-CoV-2","GAAAATCCTGCTATAG",4,41.01,8.87,-1.89,0.09,2.76,1.14,0,">1 nonsynonymous","E10P Y119M",2
"lib1","SARS-CoV-2","GAAAATCCTTGATCCA",15,176.83,8.94,-1.82,0.1,2.45,1.14,0,">1 nonsynonymous","S139A S164D",2
"lib1","SARS-CoV-2","GAAAATCGCTCATCGC",8,4.52,NA,NA,NA,NA,NA,NA,"stop","Y121S R179G K199*",3
"lib1","SARS-CoV-2","GAAAATCGGCTAGGAG",1,0.35,NA,NA,NA,NA,NA,NA,"stop","P133G S184I S200*",3
"lib1","SARS-CoV-2","GAAAATCTAACCCTCT",4,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L G101W V115I P197T",4
"lib1","SARS-CoV-2","GAAAATCTATTAAGCT",4,14.01,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V37N C49R T63N A89C",4
"lib1","SARS-CoV-2","GAAAATCTATTTATTT",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D S19L Y93I E141C",4
"lib1","SARS-CoV-2","GAAAATGAAAATTATT",3,33.08,9.55,-1.22,0.11,1.68,1.17,0.01,">1 nonsynonymous","S29A S41Y S69L N130T T201N",5
"lib1","SARS-CoV-2","GAAAATGAAAGACCCC",3,47.99,9.65,-1.12,0.12,1.91,1.08,0.01,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","GAAAATGAAGGCCAGT",3,49.24,10.84,0.08,0.08,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAATGACTATATAA",9,68.18,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F12W E76I",2
"lib1","SARS-CoV-2","GAAAATGCACAAGAAA",4,16.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23V S45E A105V",3
"lib1","SARS-CoV-2","GAAAATGCAGACAAGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38V D98N D112A",3
"lib1","SARS-CoV-2","GAAAATGCCCAAATAC",2,6.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38G I142C Y175I",3
"lib1","SARS-CoV-2","GAAAATGCGATCATGC",3,82.8,10.25,-0.52,0.1,2.69,1.03,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","GAAAATGGGAGCGCGT",10,186.84,10.73,-0.03,0.07,2.87,1.06,0,"1 nonsynonymous","N1M",1
"lib1","SARS-CoV-2","GAAAATGGTACCCTGT",1,49.88,10.23,-0.53,0.13,2.77,1,0.01,">1 nonsynonymous","Y35G A105W",2
"lib1","SARS-CoV-2","GAAAATGTAGAAATTG",3,0.42,NA,NA,NA,NA,NA,NA,"stop","G116Y G155*",2
"lib1","SARS-CoV-2","GAAAATGTGATGCACG",7,112.13,10.75,-0.02,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAATGTGATTATCT",1,20.4,7.01,-3.75,0.32,1.5,1.11,0.03,">1 nonsynonymous","V11F N40R F99L",3
"lib1","SARS-CoV-2","GAAAATGTGCGGAACT",2,12.8,6.08,-4.68,1.33,1.5,1.24,0.06,">1 nonsynonymous","N1L V52H A105F Y143I",4
"lib1","SARS-CoV-2","GAAAATGTGGGGCGCA",8,1.31,NA,NA,NA,NA,NA,NA,"stop","N130* S147Y",2
"lib1","SARS-CoV-2","GAAAATGTTTCGTAGG",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R C49S E76N Y119V S129A",5
"lib1","SARS-CoV-2","GAAAATTAAAAAGGCA",4,113.76,10.68,-0.09,0.06,2.87,1.09,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","GAAAATTAAAATTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y T100Y L122Y L131C I142M",5
"lib1","SARS-CoV-2","GAAAATTAAGTTATAT",4,26.16,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","N58I Q144A T170I",3
"lib1","SARS-CoV-2","GAAAATTAATATATTA",2,32.61,9.6,-1.16,0.08,2.79,1.06,0,"1 nonsynonymous","F156C",1
"lib1","SARS-CoV-2","GAAAATTAATGTACTG",4,55.59,10.13,-0.63,0.08,2.66,1.01,0,">1 nonsynonymous","A33F Y91A E141F",3
"lib1","SARS-CoV-2","GAAAATTACTCCAACT",5,52.81,10.22,-0.55,0.1,2.6,1.02,0,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","GAAAATTATATATTTA",2,41.89,10.86,0.1,0.05,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAATTCACGAGAAA",7,130.3,10.78,0.02,0.07,2.91,1.03,0,"1 nonsynonymous","S184V",1
"lib1","SARS-CoV-2","GAAAATTCAGTTTACA",3,15.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G83M I88H N118C",3
"lib1","SARS-CoV-2","GAAAATTCTATGATGA",1,28.74,9.62,-1.15,0.17,1.83,1.08,0.01,">1 nonsynonymous","F8S Q84M E186S",3
"lib1","SARS-CoV-2","GAAAATTCTCCCAGCC",7,0,NA,NA,NA,NA,NA,NA,"stop","G51* D98T A105H Y119W R136E",5
"lib1","SARS-CoV-2","GAAAATTGAACTTAAT",3,108.31,10.75,-0.01,0.09,2.92,1.02,0,">1 nonsynonymous","D98R L122S",2
"lib1","SARS-CoV-2","GAAAATTGAGCCTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* D98Y R136M",3
"lib1","SARS-CoV-2","GAAAATTGCAGTATAG",1,11.81,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14T I80G G174V",3
"lib1","SARS-CoV-2","GAAAATTGCCAGACGG",13,52.08,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D34T K48D P96L Y119P P161G",5
"lib1","SARS-CoV-2","GAAAATTGCGAAAATA",5,68.22,10.2,-0.56,0.07,2.67,1.04,0,">1 nonsynonymous","N64F D98V E141K",3
"lib1","SARS-CoV-2","GAAAATTGCGAAAGCA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","C102* A190G",2
"lib1","SARS-CoV-2","GAAAATTTCGAAAAAA",6,16.68,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C31L K48L F62Y R127K P169D",5
"lib1","SARS-CoV-2","GAAAATTTGTATAATA",5,147.22,8.61,-2.15,0.09,2.87,1.09,0,">1 nonsynonymous","T85L Y159L P197L",3
"lib1","SARS-CoV-2","GAAACAAAAAACATTA",2,27.97,6,-4.76,2,3,1.16,0,">1 nonsynonymous","L60E K114V R127L R136T",4
"lib1","SARS-CoV-2","GAAACAAAAAACGAAA",5,51.6,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","F44E Y91Q L122E T140P C158A",5
"lib1","SARS-CoV-2","GAAACAAAACTAAGAA",2,147.66,9.87,-0.89,0.08,1.98,1.08,0,">1 nonsynonymous","A14M Y35L Y178R",3
"lib1","SARS-CoV-2","GAAACAAAACTACCAA",1,29.64,10.61,-0.16,0.07,2.9,1.07,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","GAAACAAAATACTCGA",2,50.64,11.02,0.26,0.09,2.89,1,0,"1 nonsynonymous","N120K",1
"lib1","SARS-CoV-2","GAAACAAAGTTGGTCC",3,9.46,9.19,-1.57,0.36,1.5,1.11,0.04,">1 nonsynonymous","G86T D97G F160N",3
"lib1","SARS-CoV-2","GAAACAAAGTTTCAAG",3,23.18,9.52,-1.25,0.31,1.73,1.23,0.07,">1 nonsynonymous","T15Y D112E",2
"lib1","SARS-CoV-2","GAAACAAATAATTTTG",2,0.16,NA,NA,NA,NA,NA,NA,"stop","Y35R S41N A105F K128* T201C",5
"lib1","SARS-CoV-2","GAAACAAATTTGTTTA",8,80.6,6.01,-4.75,1.17,1.5,1.21,0.02,">1 nonsynonymous","I88G R124T S200T",3
"lib1","SARS-CoV-2","GAAACAACACTAAAAG",1,10.84,6,-4.76,1.9,3,1.09,0.01,">1 nonsynonymous","P54D G86W N120K S200W",4
"lib1","SARS-CoV-2","GAAACAACCATCGCAT",3,27.03,10.71,-0.05,0.09,2.94,1,0,">1 nonsynonymous","G51S N130I",2
"lib1","SARS-CoV-2","GAAACAACCTCTGGGT",3,5.08,10.69,-0.07,0.21,2.89,1.02,0.01,">1 nonsynonymous","I28M S41Q G155T S200L",4
"lib1","SARS-CoV-2","GAAACAACGATACCGA",3,37.04,6.1,-4.67,0.82,1.5,1.24,0.02,">1 nonsynonymous","G9F A33P C61F A89R A190S",5
"lib1","SARS-CoV-2","GAAACAACTACCCAAC",1,79.69,8.64,-2.12,0.11,2.58,1.12,0.01,">1 nonsynonymous","S36M K87D G116Y",3
"lib1","SARS-CoV-2","GAAACAACTTAACATA",7,102.45,8.73,-2.03,0.1,2.53,1.11,0,">1 nonsynonymous","Y35R Y119T",2
"lib1","SARS-CoV-2","GAAACAAGAACCTTCT",5,106.53,9.74,-1.02,0.11,2.38,1.08,0,">1 nonsynonymous","T3F Y35G N120D Q163R",4
"lib1","SARS-CoV-2","GAAACAAGATGAAAGT",8,2.89,NA,NA,NA,NA,NA,NA,"stop","A42S K114G G146* K198R",4
"lib1","SARS-CoV-2","GAAACAAGCTTTTTAA",4,53.31,9.01,-1.75,0.17,1.53,1.11,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","GAAACAAGTACCTGCG",2,79.33,9.87,-0.9,0.11,2.11,1.05,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","GAAACAAGTCCACGTA",6,22.25,6.63,-4.14,0.41,1.5,1.11,0.04,">1 nonsynonymous","A89R L122W V180H",3
"lib1","SARS-CoV-2","GAAACAAGTTATCCCT",3,26.3,10.85,0.09,0.06,2.94,1.08,0,">1 nonsynonymous","V37W S43W",2
"lib1","SARS-CoV-2","GAAACAATAACTGATC",5,0.54,NA,NA,NA,NA,NA,NA,"stop","C102G P133*",2
"lib1","SARS-CoV-2","GAAACAATACCCAACG",9,88.4,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","A14G I88W L95K T100E P197G",5
"lib1","SARS-CoV-2","GAAACAATGCTTGCAA",5,28.47,6,-4.76,2,3,1.16,0,">1 nonsynonymous","K56S N64L F99C G152L",4
"lib1","SARS-CoV-2","GAAACACAACGAGAGA",4,146.18,8.44,-2.33,0.18,1.9,1.09,0.01,">1 nonsynonymous","N1L Y119S G155I",3
"lib1","SARS-CoV-2","GAAACACATACCCTAG",9,199.28,7.48,-3.29,0.16,1.72,1.17,0.01,">1 nonsynonymous","V115D Y143R",2
"lib1","SARS-CoV-2","GAAACACATAGTATTG",6,32.03,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y21P T55Y G146V",3
"lib1","SARS-CoV-2","GAAACACATATATTCA",2,14.7,10.66,-0.11,0.13,2.9,1.01,0.02,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","GAAACACCTAATTGGG",9,8.82,NA,NA,NA,NA,NA,NA,"stop","C31L S45* G83I Y119S",4
"lib1","SARS-CoV-2","GAAACACGGTCAATTA",4,30.67,6,-4.76,2,3,1.15,0,">1 nonsynonymous","D68R T85M Y119L N151Y Y178V P191Y",6
"lib1","SARS-CoV-2","GAAACACTATCATCGG",3,46.98,10.24,-0.52,0.04,2.94,1.02,0,">1 nonsynonymous","G9I L60S",2
"lib1","SARS-CoV-2","GAAACACTTAAATGTA",6,4.92,NA,NA,NA,NA,NA,NA,"stop","L38* G86M P169N V182L",4
"lib1","SARS-CoV-2","GAAACACTTCCAAAAT",7,63.51,8.4,-2.37,0.14,2.64,1.08,0.01,">1 nonsynonymous","K128F G146K",2
"lib1","SARS-CoV-2","GAAACACTTGAAGTAA",12,63.11,6.1,-4.66,0.7,1.5,1.18,0.02,">1 nonsynonymous","I2V C49R P54Q Y119T P149F",5
"lib1","SARS-CoV-2","GAAACAGAAAGACTAA",4,49.41,9.57,-1.2,0.07,2.06,1.04,0,">1 nonsynonymous","T55C I104H",2
"lib1","SARS-CoV-2","GAAACAGACAGATAGC",1,51.18,8.63,-2.14,0.11,2.72,1.14,0,">1 nonsynonymous","N4H F44K K87E",3
"lib1","SARS-CoV-2","GAAACAGAGAGGAGAC",4,43.34,10.35,-0.41,0.07,2.83,1,0,">1 nonsynonymous","Y39D F44Y V115W",3
"lib1","SARS-CoV-2","GAAACAGAGTTATAGC",7,89.38,9.89,-0.88,0.1,2.06,1.06,0,">1 nonsynonymous","I28T V37T C61L",3
"lib1","SARS-CoV-2","GAAACAGAGTTCATCT",6,97.62,6.14,-4.62,0.46,1.5,1.13,0.01,">1 nonsynonymous","E10P N40D G86K",3
"lib1","SARS-CoV-2","GAAACAGATGTGCCTA",5,212.08,6.07,-4.7,0.71,1.5,1.18,0.01,">1 nonsynonymous","R16N F44R A105T L162N",4
"lib1","SARS-CoV-2","GAAACAGCACTTATGG",9,98.51,6,-4.76,0.61,2.88,1.16,0,">1 nonsynonymous","C158L T201Y",2
"lib1","SARS-CoV-2","GAAACAGCTAAAACTT",4,60.94,10.23,-0.53,0.07,2.76,1.03,0,">1 nonsynonymous","L57F S147F",2
"lib1","SARS-CoV-2","GAAACAGCTATCTACT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27F Y35I V77W F99L Y119* G166S",6
"lib1","SARS-CoV-2","GAAACAGGAGAATCTA",5,54.81,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P7K D59V Y93G W106T",4
"lib1","SARS-CoV-2","GAAACAGGCGCGAGGG",7,105.8,10.65,-0.11,0.04,2.92,1.05,0,">1 nonsynonymous","T140Y K198S",2
"lib1","SARS-CoV-2","GAAACAGGCTTGTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I D59A N118L T148S L183R",5
"lib1","SARS-CoV-2","GAAACAGTACATGAAT",4,33.69,6.44,-4.32,0.32,1.54,1.13,0.01,">1 nonsynonymous","G86L Q144E",2
"lib1","SARS-CoV-2","GAAACAGTGAAAAACT",1,8.62,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R27S Y66K W106V G174L",4
"lib1","SARS-CoV-2","GAAACAGTGTCCTGCC",5,63.95,10.71,-0.05,0.06,2.9,1.05,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","GAAACAGTTACCTATG",1,10.96,10.05,-0.72,0.21,2.16,1.01,0.03,">1 nonsynonymous","S53I C61E E76G S200N",4
"lib1","SARS-CoV-2","GAAACAGTTAGTAGAA",2,69.94,8.86,-1.9,0.1,2.58,1.06,0,">1 nonsynonymous","S43G T85S L122D G166W K199M",5
"lib1","SARS-CoV-2","GAAACATAAACAACAT",3,66.81,10.51,-0.26,0.07,2.88,1.05,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","GAAACATACGCAGATA",5,15.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V103G G117L",2
"lib1","SARS-CoV-2","GAAACATACTACCCAT",1,21.45,10.65,-0.11,0.04,2.95,1.01,0,"1 nonsynonymous","N58T",1
"lib1","SARS-CoV-2","GAAACATCATACTACT",2,27.59,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R27P S36Q L57D G86L P149T",5
"lib1","SARS-CoV-2","GAAACATCCACTTATT",4,41.34,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12I V77G D90F Y143E G152K",5
"lib1","SARS-CoV-2","GAAACATGAATCAACG",6,153.45,10.81,0.05,0.1,2.94,1.03,0,">1 nonsynonymous","S43T T201K",2
"lib1","SARS-CoV-2","GAAACATGAATCAGCG",5,16.55,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N64Y L95R",2
"lib1","SARS-CoV-2","GAAACATGCACAAGGG",5,149.02,10.69,-0.07,0.05,2.88,1.03,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","GAAACATGCTCATCAA",6,55.24,10.48,-0.28,0.06,2.88,1.09,0,">1 nonsynonymous","F8M T201Y",2
"lib1","SARS-CoV-2","GAAACATGGCCGCACA",8,272.3,6.62,-4.14,0.39,1.5,1.22,0.02,">1 nonsynonymous","F8L L95V R136P V173R",4
"lib1","SARS-CoV-2","GAAACATGGTAAATCA",2,9.68,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2P A67D S139N",3
"lib1","SARS-CoV-2","GAAACATTACAGTTGA",8,112.61,10.09,-0.68,0.04,2.91,1,0,">1 nonsynonymous","G9R F44A V115L T201S",4
"lib1","SARS-CoV-2","GAAACATTAGAGTAAA",2,23.82,6.52,-4.24,0.38,1.5,1.07,0.03,">1 nonsynonymous","N107F Q176C",2
"lib1","SARS-CoV-2","GAAACATTGCCGAAAT",8,5.65,NA,NA,NA,NA,NA,NA,"stop","D98G L131*",2
"lib1","SARS-CoV-2","GAAACCAACGGCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y G51V K128L",3
"lib1","SARS-CoV-2","GAAACCAATAACCAAC",2,33.31,10.67,-0.1,0.17,2.86,1.03,0.01,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","GAAACCAATACGCGTA",4,41.22,8.25,-2.52,0.15,1.57,1.17,0.01,">1 nonsynonymous","A14I A67F G83R F156V",4
"lib1","SARS-CoV-2","GAAACCACTGTGTTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","N58* A89S N107Y Y121P F156L",5
"lib1","SARS-CoV-2","GAAACCAGTACGCCAG",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G F99N",2
"lib1","SARS-CoV-2","GAAACCATAATGAGAG",2,38.6,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G86R T100N C150D V194I",4
"lib1","SARS-CoV-2","GAAACCATACAGGAAA",2,26.58,6.35,-4.41,0.66,1.54,1.2,0.04,">1 nonsynonymous","A42L S53F F156N Q176P",4
"lib1","SARS-CoV-2","GAAACCATACCAAGTG",1,5.12,8.94,-1.83,0.23,2.25,1.03,0.02,">1 nonsynonymous","A145L G155C",2
"lib1","SARS-CoV-2","GAAACCATGCATAACA",9,21.95,10.06,-0.71,0.3,1.5,1,0.05,">1 nonsynonymous","Y50S K56G V103K S113L E141F C150E",6
"lib1","SARS-CoV-2","GAAACCATGCCCTTTC",5,116.31,10.03,-0.74,0.05,2.9,1,0,">1 nonsynonymous","G116R L122V F156L",3
"lib1","SARS-CoV-2","GAAACCCAATATATGC",3,26.83,10.76,0,0.05,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAACCCAATTCGTCT",3,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F T15V I80Y I142F N151R",5
"lib1","SARS-CoV-2","GAAACCCAGATCAATT",1,57.53,10.54,-0.23,0.06,2.89,1.05,0,">1 nonsynonymous","N1V F160I",2
"lib1","SARS-CoV-2","GAAACCCAGATGGATT",1,15.14,8.64,-2.13,0.13,2.75,1,0.01,">1 nonsynonymous","N64H G146I",2
"lib1","SARS-CoV-2","GAAACCCCGGCGGCTA",3,10.28,6.23,-4.54,1.43,3,1.08,0.01,">1 nonsynonymous","N24K A42D F44V V71F I88L S184W",6
"lib1","SARS-CoV-2","GAAACCCCTAACGAAA",7,43.87,6.09,-4.68,0.75,1.5,1.16,0.02,">1 nonsynonymous","N30R Y39L S45W G51I K94Q C150G Q168S",7
"lib1","SARS-CoV-2","GAAACCCCTTGGCTAC",4,44.33,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G51V C158P",2
"lib1","SARS-CoV-2","GAAACCCGCCGGCACT",2,8.43,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L95R R179G",2
"lib1","SARS-CoV-2","GAAACCCGGCTGGTAC",2,12.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5G S43L I72N",3
"lib1","SARS-CoV-2","GAAACCCTAACCGAAA",1,10.94,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","S45H D90T G117L P149R",4
"lib1","SARS-CoV-2","GAAACCCTGTGTATCA",1,9.19,10.62,-0.14,0.25,2.3,1.02,0.02,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GAAACCGAAGATATCA",4,44.29,10.67,-0.09,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAACCGAAGTAATGC",7,85.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V71E F99A Y178L",3
"lib1","SARS-CoV-2","GAAACCGAATAACTTG",15,237.72,10.09,-0.68,0.04,2.87,1.01,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","GAAACCGATATCCTAA",1,1.06,NA,NA,NA,NA,NA,NA,"stop","N120W T170*",2
"lib1","SARS-CoV-2","GAAACCGATCTCCGAG",2,13.35,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I72R E76G K128R T148Y",4
"lib1","SARS-CoV-2","GAAACCGCAATCTCTG",3,1.98,NA,NA,NA,NA,NA,NA,"stop","F12S F99T P161* L183D T201A",5
"lib1","SARS-CoV-2","GAAACCGCAGTCCAAG",1,11.83,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","S69L D137E E154F",3
"lib1","SARS-CoV-2","GAAACCGCTCTGCGCA",12,30.36,6,-4.76,2,1.5,1.37,0.06,">1 nonsynonymous","L95M V103H Y119Q V182G",4
"lib1","SARS-CoV-2","GAAACCGCTGATAACT",4,34.32,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","V32I F70K W106Y G152P",4
"lib1","SARS-CoV-2","GAAACCGGTACAAAAC",3,23.61,6.33,-4.43,0.7,1.5,1.14,0.02,">1 nonsynonymous","A105K S113E Y143A T201A",4
"lib1","SARS-CoV-2","GAAACCGTACAACGAG",17,146.55,10.72,-0.04,0.07,2.89,1.07,0,"1 nonsynonymous","G152K",1
"lib1","SARS-CoV-2","GAAACCTATAAGTTTC",10,1.09,NA,NA,NA,NA,NA,NA,"stop","Y39M N58T N107C T148M P161*",5
"lib1","SARS-CoV-2","GAAACCTCTTATCGGT",1,20.45,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A145T C150L V173P",3
"lib1","SARS-CoV-2","GAAACCTCTTCACACG",6,36.24,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","G101I S164L",2
"lib1","SARS-CoV-2","GAAACCTGCCCTAAAA",3,42.22,9.87,-0.89,0.13,1.8,1.15,0.01,">1 nonsynonymous","N1L Y91Q",2
"lib1","SARS-CoV-2","GAAACCTTCAGCACCA",1,12.84,10.88,0.12,0.11,2.98,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAACCTTTGAGAACA",4,45.49,6,-4.76,1.27,1.5,1.13,0.02,">1 nonsynonymous","F47L D90R F156C F167V",4
"lib1","SARS-CoV-2","GAAACGAAACATGAGG",1,19.24,8.34,-2.43,0.49,1.5,1.1,0.05,">1 nonsynonymous","I88T G166M",2
"lib1","SARS-CoV-2","GAAACGAAGGACAACG",3,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55R G86L",2
"lib1","SARS-CoV-2","GAAACGAATTTCCAAG",1,58.13,10.29,-0.47,0.05,2.84,1,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","GAAACGACGTCCAACT",1,88.22,8.57,-2.19,0.13,2.45,1.04,0.01,">1 nonsynonymous","I138D G146V",2
"lib1","SARS-CoV-2","GAAACGAGGTCTCACT",4,29.33,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y50S L57S Y66N F160K",4
"lib1","SARS-CoV-2","GAAACGAGTACCCGTA",12,95.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G L57S K128A T201A",4
"lib1","SARS-CoV-2","GAAACGATATAATACA",3,17.39,9.89,-0.88,0.15,2.26,1.14,0.01,">1 nonsynonymous","D98V Y121M",2
"lib1","SARS-CoV-2","GAAACGATCAATGTAA",3,106.06,10.18,-0.59,0.08,2.35,1,0,">1 nonsynonymous","P82T L122S",2
"lib1","SARS-CoV-2","GAAACGATGGTTCGCT",1,37.98,10.65,-0.12,0.04,2.94,1,0,">1 nonsynonymous","D97S G116H",2
"lib1","SARS-CoV-2","GAAACGATTCCAAATT",8,56.5,10.77,0.01,0.07,2.91,1.01,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","GAAACGCAAATTGCAT",1,19.12,6,-4.76,0.77,3,1.29,0.01,">1 nonsynonymous","G9L T15S C102W V180W",4
"lib1","SARS-CoV-2","GAAACGCAGTAACTAC",4,43.34,10.67,-0.1,0.05,2.97,1.01,0,">1 nonsynonymous","K48N A105S",2
"lib1","SARS-CoV-2","GAAACGCATAGAAGGG",15,351.65,10.44,-0.33,0.04,2.88,1.03,0,"1 nonsynonymous","F47C",1
"lib1","SARS-CoV-2","GAAACGCGCACTAGTA",3,24.73,10.69,-0.07,0.08,2.93,1.05,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GAAACGCGCCTATAAG",1,32.82,7.76,-3,0.25,1.5,1.16,0.02,">1 nonsynonymous","F8C S41T F44G G155D",4
"lib1","SARS-CoV-2","GAAACGCGGATGTTCT",4,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R Q84K L131E G146L",4
"lib1","SARS-CoV-2","GAAACGCTAATGATTA",5,0.9,NA,NA,NA,NA,NA,NA,"stop","P7M V37I Y50* L60Q V71K S108* S113V V181E",8
"lib1","SARS-CoV-2","GAAACGGAGCAACCTA",7,292.96,10.32,-0.45,0.03,2.86,1.04,0,">1 nonsynonymous","P149M Y178V P197T",3
"lib1","SARS-CoV-2","GAAACGGCCAGCGGGG",2,84.18,10.66,-0.1,0.06,2.88,1.07,0,"1 nonsynonymous","L57I",1
"lib1","SARS-CoV-2","GAAACGGCTAACACAT",4,122.54,8.7,-2.07,0.07,2.67,1.08,0,">1 nonsynonymous","S41L N157H",2
"lib1","SARS-CoV-2","GAAACGGTTCGTTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S53* T148S",2
"lib1","SARS-CoV-2","GAAACGTACCTTTTAG",8,47.34,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49D C61R I80Q G86F D137C",5
"lib1","SARS-CoV-2","GAAACGTATTATATCG",1,106.62,10.66,-0.1,0.04,2.89,1.05,0,">1 nonsynonymous","S41N T63K L122W",3
"lib1","SARS-CoV-2","GAAACGTCCAAGCTTA",9,122.91,10.7,-0.07,0.07,2.84,1.08,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","GAAACGTCCGAATTAA",1,15.12,10.53,-0.24,0.15,2.86,1.04,0.01,">1 nonsynonymous","L5Q K48L K114H",3
"lib1","SARS-CoV-2","GAAACGTTCTTCATTA",22,7.94,NA,NA,NA,NA,NA,NA,"stop","L5R P82E Y91* Y119L N171S",5
"lib1","SARS-CoV-2","GAAACGTTTATTCACT",3,82.93,10.7,-0.07,0.05,2.91,1.05,0,">1 nonsynonymous","D90F Q163A",2
"lib1","SARS-CoV-2","GAAACGTTTGATAAAC",10,94.99,10.69,-0.08,0.04,2.91,1.05,0,">1 nonsynonymous","L5W S36V",2
"lib1","SARS-CoV-2","GAAACTAAAATATTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","S41Y C49* V65R",3
"lib1","SARS-CoV-2","GAAACTAAACAATGAC",5,83.01,10.64,-0.12,0.06,2.92,1.03,0,">1 nonsynonymous","I2F S53I S139T",3
"lib1","SARS-CoV-2","GAAACTAAACCTGAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C102L L125S I138* T201L",4
"lib1","SARS-CoV-2","GAAACTAAACGATATA",8,180.24,8.65,-2.12,0.08,2.81,1.06,0,"1 nonsynonymous","R73E",1
"lib1","SARS-CoV-2","GAAACTAAATTTCATT",2,22.55,10.35,-0.42,0.18,2.55,1.1,0.02,">1 nonsynonymous","K56W F185H",2
"lib1","SARS-CoV-2","GAAACTAACTACTGCT",6,30.72,10.6,-0.16,0.12,2.71,1,0.01,">1 nonsynonymous","G9W P149Y",2
"lib1","SARS-CoV-2","GAAACTAACTCACTGG",2,13.22,8.35,-2.42,0.16,2.27,1.05,0.01,">1 nonsynonymous","A18S L122V Y175V",3
"lib1","SARS-CoV-2","GAAACTAAGATACATC",2,56.84,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N24W Y50T D97T",3
"lib1","SARS-CoV-2","GAAACTAATATCAAAC",2,17.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A18T A33R R136H I142S",4
"lib1","SARS-CoV-2","GAAACTAATCTTAGCA",3,2.09,NA,NA,NA,NA,NA,NA,"stop","T3R R16V Y66V E135*",4
"lib1","SARS-CoV-2","GAAACTAATGAAACAT",5,11.6,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N58Y T63L F160W Q163H V182T",5
"lib1","SARS-CoV-2","GAAACTACAGATACGA",3,40.49,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2V R16K F167A",3
"lib1","SARS-CoV-2","GAAACTACGACATTTT",3,98.25,6.33,-4.43,0.34,1.5,1.13,0.01,">1 nonsynonymous","T63V V77T K94V I138R Y178S H189D",6
"lib1","SARS-CoV-2","GAAACTAGAATAATAT",2,5.92,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","C49L T85V N157I",3
"lib1","SARS-CoV-2","GAAACTAGCACAAGGT",3,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L V103E T201R",3
"lib1","SARS-CoV-2","GAAACTAGTATTTACA",7,153.04,10.36,-0.4,0.07,2.61,1,0,"1 nonsynonymous","E76N",1
"lib1","SARS-CoV-2","GAAACTATAAAGAATT",2,46.11,10.11,-0.66,0.1,2.52,1.03,0,">1 nonsynonymous","T46I K56P",2
"lib1","SARS-CoV-2","GAAACTATATGTATAG",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q F44L G83W D97V G117T K128Y E141A P149H E154H Q176S",10
"lib1","SARS-CoV-2","GAAACTCAAAACTACA",3,16.37,9.34,-1.42,0.32,1.5,1.01,0.05,">1 nonsynonymous","D34H D90I",2
"lib1","SARS-CoV-2","GAAACTCACATCGAAC",1,28.29,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","R25W F44S T55I",3
"lib1","SARS-CoV-2","GAAACTCAGAGATAGT",2,7.66,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D59E L95M F99C",3
"lib1","SARS-CoV-2","GAAACTCCTTAAATAG",2,48.97,10.58,-0.18,0.16,2.73,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAAACTCTAAAATTTT",3,27.38,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y35L P82G N130M I138S F156C P197Q",6
"lib1","SARS-CoV-2","GAAACTCTAATGGTAC",4,52.18,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N58S S113Q I142C C158G",4
"lib1","SARS-CoV-2","GAAACTCTAGGTCCAC",6,77.65,10.8,0.04,0.06,2.9,1.06,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","GAAACTCTTACATTCA",2,9.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68E G83F V181Q",3
"lib1","SARS-CoV-2","GAAACTCTTGAGGACC",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q W23D F44I K128V S139C N157F",6
"lib1","SARS-CoV-2","GAAACTGAAATCGGTT",2,19.35,6.07,-4.7,0.84,1.5,1.2,0.02,">1 nonsynonymous","I28W L95K G101S S129G S164H",5
"lib1","SARS-CoV-2","GAAACTGAACGAGTAC",6,118.47,10.79,0.02,0.08,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAACTGACCAGAAGG",1,1.13,NA,NA,NA,NA,NA,NA,"stop","N4Y N24G G83Y V173I A190*",5
"lib1","SARS-CoV-2","GAAACTGCCCTGACAC",2,2.07,NA,NA,NA,NA,NA,NA,"stop","P7T L95* S113E Y178L",4
"lib1","SARS-CoV-2","GAAACTGCTGGGAGGA",5,32.4,10.32,-0.45,0.07,2.96,1,0,">1 nonsynonymous","Q84R G116K A190T",3
"lib1","SARS-CoV-2","GAAACTGGCCTAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* C31N Q84K L131W T201N",5
"lib1","SARS-CoV-2","GAAACTGGTAATGCCG",3,21.75,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","P96Q V103C F160S",3
"lib1","SARS-CoV-2","GAAACTGTAACATACT",5,27.72,8.83,-1.93,0.3,1.5,1,0.05,">1 nonsynonymous","N40L G86S K199M",3
"lib1","SARS-CoV-2","GAAACTGTAATGCTGG",5,0.2,NA,NA,NA,NA,NA,NA,"stop","A42C G51* V103A",3
"lib1","SARS-CoV-2","GAAACTGTATGACAAA",2,22.87,10.36,-0.4,0.09,2.8,1.11,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","GAAACTGTGACGTAAA",1,40.75,10.16,-0.61,0.08,2.84,1,0,"1 nonsynonymous","Y121K",1
"lib1","SARS-CoV-2","GAAACTGTTAAAAAGC",2,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F C49D D97N",3
"lib1","SARS-CoV-2","GAAACTTAATCCCCAT",2,27.34,9.69,-1.07,0.15,1.98,1.11,0.01,">1 nonsynonymous","T100K P133L",2
"lib1","SARS-CoV-2","GAAACTTAATTAAATG",1,17.15,6,-4.76,2,3,1.07,0,">1 nonsynonymous","S29A L60G F70S",3
"lib1","SARS-CoV-2","GAAACTTACTGTTGAG",5,25.69,9.77,-0.99,0.12,2.13,1.09,0.01,">1 nonsynonymous","C6Y T100N S147P",3
"lib1","SARS-CoV-2","GAAACTTATAGTACTA",1,136.88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D34W N64K I104V N107I",4
"lib1","SARS-CoV-2","GAAACTTATCCCCAAC",5,24.68,7.23,-3.54,0.4,1.5,1.01,0.04,">1 nonsynonymous","V103M E154F",2
"lib1","SARS-CoV-2","GAAACTTATTGGTTAG",3,39.58,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F99I A105V I138L P161R",4
"lib1","SARS-CoV-2","GAAACTTCAATTCTCA",2,39.69,10.37,-0.39,0.05,2.92,1,0,">1 nonsynonymous","A14D Y39V",2
"lib1","SARS-CoV-2","GAAACTTCCCATTATC",3,45.01,8.27,-2.5,0.18,1.76,1.12,0.01,">1 nonsynonymous","A89G V103I G116A",3
"lib1","SARS-CoV-2","GAAACTTGACTCCTTC",1,8.11,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A22V K48D F99P Y119A T148D",5
"lib1","SARS-CoV-2","GAAACTTGATATAGAC",3,27.58,10.81,0.04,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAACTTGCAGACATA",1,66.35,10.25,-0.51,0.07,2.94,1.02,0,">1 nonsynonymous","F62W Y91W A192K K199S",4
"lib1","SARS-CoV-2","GAAACTTTAATATCCA",1,0.88,NA,NA,NA,NA,NA,NA,"stop","F8L A18* C102S",3
"lib1","SARS-CoV-2","GAAACTTTTGAATAAC",4,74.46,10.39,-0.37,0.06,2.86,1.07,0,">1 nonsynonymous","V77M Y178F",2
"lib1","SARS-CoV-2","GAAAGAAAAAGACAAG",2,5.26,9.71,-1.06,0.25,2.7,1.16,0.01,">1 nonsynonymous","T15N S139D",2
"lib1","SARS-CoV-2","GAAAGAAAACTGGAGG",4,67.94,10.62,-0.15,0.04,2.88,1.07,0,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","GAAAGAAAAGAAGTAA",3,108.38,9.5,-1.26,0.09,2.78,1.13,0,">1 nonsynonymous","R27V C61E D97C Y119F T201L",5
"lib1","SARS-CoV-2","GAAAGAAACAAAATAC",6,31.94,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C49R L111A V173Q",3
"lib1","SARS-CoV-2","GAAAGAAACCAGCTAA",4,1.61,NA,NA,NA,NA,NA,NA,"stop","A42* L60H G155C",3
"lib1","SARS-CoV-2","GAAAGAAAGACGAAAT",2,20.56,8.08,-2.68,0.17,2.23,1.06,0.01,">1 nonsynonymous","L5M C61F Y175A",3
"lib1","SARS-CoV-2","GAAAGAAAGAGGGATA",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R S45L F62E F156W",4
"lib1","SARS-CoV-2","GAAAGAAATGCACTTC",12,99.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A22T R124S C195S",3
"lib1","SARS-CoV-2","GAAAGAAATTTCACAT",2,51.72,8.75,-2.01,0.17,1.91,1.09,0.01,">1 nonsynonymous","Y121A G152L",2
"lib1","SARS-CoV-2","GAAAGAACAAAAGCTT",2,23.8,6,-4.76,2,1.5,1.21,0.03,"1 nonsynonymous","F70D",1
"lib1","SARS-CoV-2","GAAAGAACATGGTGAA",3,22.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3C N107F R179P",3
"lib1","SARS-CoV-2","GAAAGAACCACACTAC",2,0.08,NA,NA,NA,NA,NA,NA,"stop","N13Y R27L D68R P82L G117A G155H Q176S S200*",8
"lib1","SARS-CoV-2","GAAAGAACCTCAAAAA",3,79.7,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S45P P133Y N151S Y165E",4
"lib1","SARS-CoV-2","GAAAGAAGAAGCGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L F17T Y39M C49*",4
"lib1","SARS-CoV-2","GAAAGAAGATTTAATG",2,8.22,6.36,-4.41,2,1.5,1.28,0.03,">1 nonsynonymous","S41C L57R T85M G116I",4
"lib1","SARS-CoV-2","GAAAGAAGCACACATA",3,19.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G F70I Y119I",3
"lib1","SARS-CoV-2","GAAAGAAGCTATAGTT",1,11.26,6.56,-4.2,0.43,1.5,1.02,0.03,">1 nonsynonymous","F8L Q84L L111Q C150N P161D",5
"lib1","SARS-CoV-2","GAAAGAAGGGCATTGC",2,24.33,6.17,-4.6,0.78,1.5,1.12,0.01,">1 nonsynonymous","L5V L38P F99M P149D",4
"lib1","SARS-CoV-2","GAAAGAAGTAACAACT",1,8.78,6.23,-4.54,2,3,1.11,0,">1 nonsynonymous","P96Q I104D",2
"lib1","SARS-CoV-2","GAAAGAATACGGGCTG",1,17.29,6,-4.76,1.7,1.5,1.1,0.04,">1 nonsynonymous","I104R G166S",2
"lib1","SARS-CoV-2","GAAAGAATATGATGCG",2,38.66,10.31,-0.46,0.06,2.91,1,0,">1 nonsynonymous","I28M S41G A81S Q163L",4
"lib1","SARS-CoV-2","GAAAGAATCTAGGTAC",4,91.73,8.45,-2.32,0.12,2.54,1.07,0.01,">1 nonsynonymous","N1S Y175L",2
"lib1","SARS-CoV-2","GAAAGAATGCCTTGAC",3,24.51,9.86,-0.91,0.09,2.31,1.06,0,">1 nonsynonymous","N1K V77R K87R",3
"lib1","SARS-CoV-2","GAAAGAATGTCATCAA",8,173.12,10.27,-0.49,0.04,2.83,1,0,">1 nonsynonymous","S41A D98F T201N",3
"lib1","SARS-CoV-2","GAAAGAATTTCAATCA",2,43.84,10.72,-0.05,0.03,2.96,1,0,">1 nonsynonymous","T3D L5I D97I",3
"lib1","SARS-CoV-2","GAAAGACAACAGTAAC",2,28.1,10.77,0,0.12,2.89,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGACAACGAATGG",9,45.53,6.3,-4.47,0.69,1.5,1.12,0.03,">1 nonsynonymous","T85S F99K P169I",3
"lib1","SARS-CoV-2","GAAAGACAATATCACT",11,136.47,10.36,-0.4,0.03,2.91,1.02,0,"1 nonsynonymous","F47T",1
"lib1","SARS-CoV-2","GAAAGACAATTTACAA",4,62.87,10.22,-0.55,0.05,2.91,1.01,0,">1 nonsynonymous","K87V A89C",2
"lib1","SARS-CoV-2","GAAAGACACACCCACA",5,38.88,10.47,-0.29,0.08,2.88,1.04,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","GAAAGACACTTTCTCT",1,0.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153T",1
"lib1","SARS-CoV-2","GAAAGACAGGGAAGGC",6,87.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11Y S53N L60T N107L I142L",5
"lib1","SARS-CoV-2","GAAAGACATAAACTGT",4,796.47,7.25,-3.51,0.09,1.7,1.09,0,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","GAAAGACCATATTAAG",1,10.19,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","Y50D C61E D68E D90I G174P",5
"lib1","SARS-CoV-2","GAAAGACGTTCCTCTT",9,1.67,NA,NA,NA,NA,NA,NA,"stop","Y119A P169*",2
"lib1","SARS-CoV-2","GAAAGACTAACGTACT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E Y50C V65R D90S L122F L131V P169D",7
"lib1","SARS-CoV-2","GAAAGACTAGCAATAT",2,43.12,8.4,-2.37,0.13,2.95,1,0.01,">1 nonsynonymous","P149Q G166E T201S",3
"lib1","SARS-CoV-2","GAAAGAGAACAGTTGC",12,94.09,10.74,-0.02,0.05,2.94,1.01,0,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","GAAAGAGAAGAAAGAT",1,8,6,-4.76,2,1.5,1.1,0.07,">1 nonsynonymous","P96L P161W",2
"lib1","SARS-CoV-2","GAAAGAGAAGGCATGA",5,8.81,6,-4.76,0.64,3,1.03,0.01,">1 nonsynonymous","F44C Y121R L131V",3
"lib1","SARS-CoV-2","GAAAGAGAAGGGTCAT",1,119.22,8.53,-2.24,0.15,1.82,1.16,0.01,">1 nonsynonymous","S139G Q176R",2
"lib1","SARS-CoV-2","GAAAGAGACAAGCATC",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T N40L I142L",3
"lib1","SARS-CoV-2","GAAAGAGACCCAGGCA",2,80,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S113R Y121A F160T Q176R",4
"lib1","SARS-CoV-2","GAAAGAGAGAAAAGAT",3,131.49,9.59,-1.18,0.09,2.25,1.06,0,">1 nonsynonymous","G83H A105Y G116D",3
"lib1","SARS-CoV-2","GAAAGAGCTCACACAA",7,101.14,8.66,-2.11,0.14,1.63,1.15,0.01,">1 nonsynonymous","R127L E135M",2
"lib1","SARS-CoV-2","GAAAGAGGCTGAAATT",8,1303.71,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","L5E F12H S45L N64S S139F",5
"lib1","SARS-CoV-2","GAAAGAGGCTGTCCGT",4,20.14,6,-4.76,2,3,1.16,0,">1 nonsynonymous","K26R D34N V71M N92M F99W K114E",6
"lib1","SARS-CoV-2","GAAAGAGTACCCAGCA",3,86.19,10.44,-0.33,0.07,2.88,1.04,0,"1 nonsynonymous","Y35G",1
"lib1","SARS-CoV-2","GAAAGAGTACTAGAAA",3,29.58,10.29,-0.47,0.09,2.76,1.05,0,">1 nonsynonymous","E141I P149I",2
"lib1","SARS-CoV-2","GAAAGAGTGGCGCATA",9,114.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8N L111Q I138F P169D",4
"lib1","SARS-CoV-2","GAAAGAGTTACATCAT",2,22.21,9.99,-0.77,0.12,2.6,1.01,0.01,">1 nonsynonymous","S41E L57C F160H S184T",4
"lib1","SARS-CoV-2","GAAAGATAGGGTCATT",8,88.09,10.33,-0.44,0.06,2.93,1,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","GAAAGATCAAGTGGGC",7,137.14,10.48,-0.28,0.05,2.87,1.03,0,">1 nonsynonymous","L5T V65I D90F",3
"lib1","SARS-CoV-2","GAAAGATCACAATTAG",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y C49A",2
"lib1","SARS-CoV-2","GAAAGATCCTGTGAAC",1,93.56,6.25,-4.52,0.7,1.5,1.22,0.02,">1 nonsynonymous","T46G C61M Y175R",3
"lib1","SARS-CoV-2","GAAAGATGATAAGTAA",3,27.38,6.01,-4.75,0.77,1.5,1.22,0.01,">1 nonsynonymous","P54M G86T A105T",3
"lib1","SARS-CoV-2","GAAAGATGCCCCTGGC",3,78.69,7.16,-3.6,0.18,1.5,1.11,0.01,">1 nonsynonymous","K56D N110F Y175T",3
"lib1","SARS-CoV-2","GAAAGATGGATTTTCT",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30M E76S Y91C D98T S139L L183K",6
"lib1","SARS-CoV-2","GAAAGATTCACCGGAC",2,20.46,10.74,-0.03,0.05,2.94,1.05,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","GAAAGATTCGTCAAAC",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A T55C D90C N151S Y165G",5
"lib1","SARS-CoV-2","GAAAGCAAAAAAACGT",6,66.21,10.88,0.12,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGCAAGTAAGCAG",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G F134T T148I",3
"lib1","SARS-CoV-2","GAAAGCACCTTCAACG",8,39.34,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I72C G83W Y143K",3
"lib1","SARS-CoV-2","GAAAGCACTGGTGTAA",11,213.62,8.5,-2.26,0.1,2.51,1.07,0,">1 nonsynonymous","E10P N130L P149A T170L",4
"lib1","SARS-CoV-2","GAAAGCAGAAAGTGAG",3,51.39,10.38,-0.38,0.04,2.94,1.01,0,">1 nonsynonymous","G51S K199Y",2
"lib1","SARS-CoV-2","GAAAGCAGATCCATGG",1,9.07,10.23,-0.53,0.17,2.71,1.2,0.01,"1 nonsynonymous","A14M",1
"lib1","SARS-CoV-2","GAAAGCAGGATTCGTG",1,39.8,7.01,-3.75,0.38,1.5,1.22,0.03,">1 nonsynonymous","C31F G117C H189S",3
"lib1","SARS-CoV-2","GAAAGCATAACGCTCA",5,131.47,10.39,-0.37,0.03,2.88,1.03,0,">1 nonsynonymous","N4I N64V",2
"lib1","SARS-CoV-2","GAAAGCATAACGTACT",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L K114M F126D",3
"lib1","SARS-CoV-2","GAAAGCATGTAACACA",17,358,10.77,0.01,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGCCACTAAATAG",2,34.58,10.71,-0.05,0.05,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGCCAGGAGCGAA",2,16.24,9.48,-1.29,0.17,1.95,1.14,0.01,">1 nonsynonymous","C6N K26V V71L",3
"lib1","SARS-CoV-2","GAAAGCCAGTTGAGTA",1,49.21,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","P7S L57V T100F T170R Q176R",5
"lib1","SARS-CoV-2","GAAAGCCATAATACGA",5,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D V103R",2
"lib1","SARS-CoV-2","GAAAGCCCTTATTATA",1,24.95,10.18,-0.59,0.07,2.83,1.04,0,">1 nonsynonymous","C6M C31T Y39L",3
"lib1","SARS-CoV-2","GAAAGCCGCCCATATG",7,24.23,6.53,-4.23,1.09,1.5,1.18,0.02,">1 nonsynonymous","N13M I28S N58M D112A V173G",5
"lib1","SARS-CoV-2","GAAAGCCGGGAGAAAG",4,33.13,10.62,-0.14,0.05,2.96,1.03,0,"1 nonsynonymous","V52C",1
"lib1","SARS-CoV-2","GAAAGCCGGTTTATCT",1,1.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGCCTCACGACCA",8,116.68,9.57,-1.19,0.09,2.09,1.04,0,">1 nonsynonymous","C6V A18K",2
"lib1","SARS-CoV-2","GAAAGCCTCTAAGCAA",2,59.15,10.35,-0.42,0.06,3,1.02,0,">1 nonsynonymous","K87L P149W",2
"lib1","SARS-CoV-2","GAAAGCCTGGACCAGG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","S43* K48H I88P",3
"lib1","SARS-CoV-2","GAAAGCCTGGGAATCA",2,0,NA,NA,NA,NA,NA,NA,"stop","S43L G101*",2
"lib1","SARS-CoV-2","GAAAGCCTTAAAAATG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","P54E D98H L131E E141*",4
"lib1","SARS-CoV-2","GAAAGCCTTGGATCCT",5,3.9,NA,NA,NA,NA,NA,NA,"stop","T3P C31M A81T N92* W106Y Y178I",6
"lib1","SARS-CoV-2","GAAAGCGAAAGCATAC",2,2.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib1","SARS-CoV-2","GAAAGCGAAAGGTCCT",6,0.23,NA,NA,NA,NA,NA,NA,"stop","G9L S19L P82* S108V G155T",5
"lib1","SARS-CoV-2","GAAAGCGCGAGTCCCA",3,22.42,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V103N A192T",2
"lib1","SARS-CoV-2","GAAAGCGCGATCTCTG",9,39.56,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14V R25L T55D K87S V173K",5
"lib1","SARS-CoV-2","GAAAGCGGCACACGAA",3,15.94,6.23,-4.53,0.57,1.5,1.15,0.01,">1 nonsynonymous","S41A L60R Y119G Q144L",4
"lib1","SARS-CoV-2","GAAAGCGTGTGGAATT",2,64.92,8.37,-2.39,0.15,1.92,1.09,0.01,">1 nonsynonymous","L38T C61D G174K",3
"lib1","SARS-CoV-2","GAAAGCGTTACTAAAT",1,6.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3Y A42R S69L K114G Y121H S200H",6
"lib1","SARS-CoV-2","GAAAGCTAACTCGCAA",1,36.07,10.79,0.02,0.09,2.95,1.04,0,">1 nonsynonymous","T3N P54R C61R K199Q",4
"lib1","SARS-CoV-2","GAAAGCTAAGTAGCAC",9,54.82,6,-4.76,1.76,1.5,1.18,0.02,">1 nonsynonymous","F44R A89F D98V R124M N130K",5
"lib1","SARS-CoV-2","GAAAGCTAATCTCCGA",4,87.85,6.12,-4.65,1,1.5,1.18,0.04,">1 nonsynonymous","A22I N40S Y165L Y178I P197Q",5
"lib1","SARS-CoV-2","GAAAGCTATGACTGGT",1,46.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L60R D68R",2
"lib1","SARS-CoV-2","GAAAGCTATGAGAAAT",12,151.88,10.63,-0.13,0.02,2.94,1.02,0,"1 nonsynonymous","L95M",1
"lib1","SARS-CoV-2","GAAAGCTATGTCACAA",3,47.3,6.04,-4.73,0.75,1.5,1.14,0.01,">1 nonsynonymous","N4V D34V G51H G117N K198G",5
"lib1","SARS-CoV-2","GAAAGCTCCATGTCCT",6,216.13,10.79,0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGCTTACATAATT",8,190.06,10.73,-0.03,0.06,2.9,1.05,0,"1 nonsynonymous","V52F",1
"lib1","SARS-CoV-2","GAAAGCTTATGACAAT",3,24.79,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V11M C31R S45V Y50S P96F G101V",6
"lib1","SARS-CoV-2","GAAAGCTTCTCCCGGA",1,40.23,10.24,-0.52,0.04,2.9,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","GAAAGGAAACAAGCAG",6,30.82,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","GAAAGGAAATCTTTAA",1,5.32,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y93L V103H N118Y E154K Y165S V173R S184D",7
"lib1","SARS-CoV-2","GAAAGGACACTAAATC",2,56.9,6.1,-4.66,0.97,1.5,1.21,0.03,"1 nonsynonymous","G101Y",1
"lib1","SARS-CoV-2","GAAAGGACCACCTAAA",1,38.24,10.1,-0.67,0.08,2.68,1.09,0,">1 nonsynonymous","F44L D98E S147T S164N",4
"lib1","SARS-CoV-2","GAAAGGACCTAGGAAC",1,15.96,6.06,-4.71,0.71,3,1.19,0.01,">1 nonsynonymous","W106K S113A R179L",3
"lib1","SARS-CoV-2","GAAAGGACGAGGTGTC",7,46.67,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19R C61K D68E Y93C",4
"lib1","SARS-CoV-2","GAAAGGAGGAACAACC",3,32.22,10.68,-0.08,0.08,2.87,1.06,0,"1 nonsynonymous","R27W",1
"lib1","SARS-CoV-2","GAAAGGATAACCAAAA",3,18.23,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","L57D N157H G172R",3
"lib1","SARS-CoV-2","GAAAGGATGTTCCACA",4,52.41,10.4,-0.37,0.07,2.91,1.05,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","GAAAGGCACAACCAAT",10,192.27,9.24,-1.53,0.08,2.87,1.12,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","GAAAGGCACCCTGTTA",1,11.91,6,-4.76,0.45,3,1.12,0,">1 nonsynonymous","T3F C49A Y121V",3
"lib1","SARS-CoV-2","GAAAGGCCACTATAGC",9,1.51,NA,NA,NA,NA,NA,NA,"stop","C6* S41G S53E V103L",4
"lib1","SARS-CoV-2","GAAAGGCCACTTAATC",2,23.46,10.93,0.16,0.08,2.95,1,0,">1 nonsynonymous","L5Q S43Y L60M I138N",4
"lib1","SARS-CoV-2","GAAAGGCCGCTATGGG",2,40.95,8.66,-2.11,0.18,1.77,1.12,0.01,">1 nonsynonymous","F44I N107V",2
"lib1","SARS-CoV-2","GAAAGGCGAAGATTAA",3,26.96,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","C6L Y50I V65M F70S D112F V173D",6
"lib1","SARS-CoV-2","GAAAGGCGACTGCCGC",2,63.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G172R K198H",2
"lib1","SARS-CoV-2","GAAAGGCTACTACACT",5,109.83,9.88,-0.88,0.11,2.37,1.02,0,">1 nonsynonymous","Y35V S41V D59S R136C",4
"lib1","SARS-CoV-2","GAAAGGGATCTTAATA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","F8C V37* L60W I104S G146K",5
"lib1","SARS-CoV-2","GAAAGGGCTTATACCG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","A42Y L60H K132*",3
"lib1","SARS-CoV-2","GAAAGGGTCCAAGAAA",9,26.44,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36K F47C Y165I G174M",4
"lib1","SARS-CoV-2","GAAAGGTAAAAAAATG",1,36.07,10.68,-0.08,0.04,2.98,1,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","GAAAGGTATCTCATTT",1,18,10.5,-0.27,0.08,2.75,1.1,0,">1 nonsynonymous","D90Y T201S",2
"lib1","SARS-CoV-2","GAAAGGTCTTTTGAAG",5,111.14,10.5,-0.27,0.03,2.87,1.03,0,">1 nonsynonymous","P7N F44P V173N",3
"lib1","SARS-CoV-2","GAAAGGTGAACAGCTA",3,67.51,10.85,0.08,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGGTGATAACGCG",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L N92G R127C",3
"lib1","SARS-CoV-2","GAAAGGTGGACAACCG",8,58.7,6,-4.76,1.02,1.5,1.13,0.02,">1 nonsynonymous","Y119C T148S P161W",3
"lib1","SARS-CoV-2","GAAAGGTTCATTGGAC",3,52.77,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6L F12I S43L D59S W106D",5
"lib1","SARS-CoV-2","GAAAGTAAGATAATTT",1,17.89,6,-4.76,2,3,1.18,0.03,">1 nonsynonymous","F8V I104N G117L R124P P161C V181L",6
"lib1","SARS-CoV-2","GAAAGTAAGTTTTTGA",20,7.76,NA,NA,NA,NA,NA,NA,"stop","K48* N151I",2
"lib1","SARS-CoV-2","GAAAGTAATAGAAGTT",1,6.99,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","T55W V103G",2
"lib1","SARS-CoV-2","GAAAGTAATGACTTTC",2,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77F G116H",2
"lib1","SARS-CoV-2","GAAAGTAATTATGAAT",4,57.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14D N107W S113L R127G E141M",5
"lib1","SARS-CoV-2","GAAAGTACAATTTCTA",8,9.41,6.23,-4.53,0.5,3,1.09,0.01,">1 nonsynonymous","T85M D90P Q144P",3
"lib1","SARS-CoV-2","GAAAGTACCAAATACG",7,56.5,6.66,-4.1,0.26,1.5,1.14,0.01,">1 nonsynonymous","G9L L122W C158S",3
"lib1","SARS-CoV-2","GAAAGTAGACGTCGCA",3,16.93,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15G Y50D T100H P149K",4
"lib1","SARS-CoV-2","GAAAGTAGTACCTGGC",4,10.79,6,-4.76,2,3,1.03,0,">1 nonsynonymous","L5K Y39R F99C",3
"lib1","SARS-CoV-2","GAAAGTATAAACTGGA",2,43.62,9.38,-1.39,0.09,2.75,1.11,0,">1 nonsynonymous","L60W N118H",2
"lib1","SARS-CoV-2","GAAAGTATACCGTTAA",7,65.74,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","F12G I142A V173S",3
"lib1","SARS-CoV-2","GAAAGTATATCTATCA",4,2.93,NA,NA,NA,NA,NA,NA,"stop","C6P N13S P96* P197A",4
"lib1","SARS-CoV-2","GAAAGTATATCTTATA",4,1.54,NA,NA,NA,NA,NA,NA,"stop","L60A L183*",2
"lib1","SARS-CoV-2","GAAAGTATTACGAAAA",3,28.06,6,-4.76,1.54,1.5,1.23,0.02,">1 nonsynonymous","C6V D34R G83H L95F L125A G166E",6
"lib1","SARS-CoV-2","GAAAGTATTAGGCGAA",3,29.1,10.81,0.04,0.08,2.97,1,0,">1 nonsynonymous","K56N L122W",2
"lib1","SARS-CoV-2","GAAAGTCAAGACATGA",2,28.6,10.75,-0.01,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAAGTCAATAGCAAT",2,225.56,10.82,0.05,0.08,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAAGTCCACATAAAA",1,27.25,10.79,0.03,0.08,2.91,1.05,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","GAAAGTCCAGATAAAC",5,90.21,10.15,-0.62,0.08,2.71,1,0,">1 nonsynonymous","K26L Y91L D98H",3
"lib1","SARS-CoV-2","GAAAGTCCTACACATC",1,45.62,6.08,-4.68,0.79,1.5,1.14,0.02,">1 nonsynonymous","Y39M L60R F167R",3
"lib1","SARS-CoV-2","GAAAGTCGATTCTAAA",2,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D S69K C158R",3
"lib1","SARS-CoV-2","GAAAGTCTATGTGAGA",7,17.35,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L60R E141T G152S R179L",4
"lib1","SARS-CoV-2","GAAAGTCTGCCCCAAT",9,8.16,NA,NA,NA,NA,NA,NA,"stop","C6V V11S S139I G152C Q176*",5
"lib1","SARS-CoV-2","GAAAGTCTTGAATACA",2,16.59,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","D98E N118C C158K Y165F N171D",5
"lib1","SARS-CoV-2","GAAAGTGAATAAGAAG",7,46.63,10.02,-0.74,0.09,2.79,1.06,0,">1 nonsynonymous","K87S V103I T201S",3
"lib1","SARS-CoV-2","GAAAGTGACACAATAA",11,172.72,7.63,-3.13,0.11,1.5,1.11,0,"1 nonsynonymous","C150P",1
"lib1","SARS-CoV-2","GAAAGTGGTATATGCA",2,8.47,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N13E S113Y E141A G174I",4
"lib1","SARS-CoV-2","GAAAGTGGTTTAATCA",7,73.41,10.15,-0.61,0.05,2.87,1,0,">1 nonsynonymous","S45N S53F C61T",3
"lib1","SARS-CoV-2","GAAAGTGTTAATCGTC",2,8.87,11.1,0.33,0.11,2.87,1.04,0,"1 nonsynonymous","N1P",1
"lib1","SARS-CoV-2","GAAAGTTCGTGTGGCT",4,31.51,9.52,-1.25,0.23,1.5,1.06,0.02,">1 nonsynonymous","A81E D90F S139Q",3
"lib1","SARS-CoV-2","GAAAGTTGAAGTCCTA",6,70.07,8.47,-2.29,0.17,1.62,1.2,0.01,">1 nonsynonymous","A33R F62L T85R K94R S147C",5
"lib1","SARS-CoV-2","GAAAGTTGGACAAAAT",3,48.76,6.5,-4.26,0.6,1.5,1.15,0.04,">1 nonsynonymous","T3K V11R F44S T55E D90T F99A N120A T148L",8
"lib1","SARS-CoV-2","GAAAGTTTTACCCTAT",2,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T L122V P177K",3
"lib1","SARS-CoV-2","GAAAGTTTTTAACGGC",3,63.23,10.66,-0.1,0.1,2.86,1.12,0,"1 nonsynonymous","S53Q",1
"lib1","SARS-CoV-2","GAAATAAAAAAACTTG",2,39.73,10.79,0.03,0.1,2.88,1.1,0,"1 nonsynonymous","S108A",1
"lib1","SARS-CoV-2","GAAATAAAAAGTATCC",2,15.84,10.75,-0.01,0.08,2.87,1.06,0,">1 nonsynonymous","S41R D90Q",2
"lib1","SARS-CoV-2","GAAATAAAACAACCTG",1,40.53,6,-4.76,1.23,3,1.14,0,">1 nonsynonymous","S45V R127V Q144P Y165V",4
"lib1","SARS-CoV-2","GAAATAAAACATACGG",5,26.48,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L38I D90L Y123D R136K",4
"lib1","SARS-CoV-2","GAAATAAAATGTCTAT",6,6.98,NA,NA,NA,NA,NA,NA,"stop","C61* Y91T",2
"lib1","SARS-CoV-2","GAAATAAACGGTAACC",4,127.3,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","D34H N40D N92K L122V N130V",5
"lib1","SARS-CoV-2","GAAATAAAGGAATGTA",2,20.35,10.52,-0.25,0.08,2.82,1.09,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","GAAATAAAGTGCGAGC",1,16.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S53Q F62S D90I N118E P177L",5
"lib1","SARS-CoV-2","GAAATAAATAATACTA",8,22.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S19I Q144A G166C Y178G",4
"lib1","SARS-CoV-2","GAAATAAATAGCTGGC",3,29.09,9.88,-0.88,0.09,2.11,1.02,0,">1 nonsynonymous","K94F T201K",2
"lib1","SARS-CoV-2","GAAATAAATTATAACA",1,8.3,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V71R Y119K P133I",3
"lib1","SARS-CoV-2","GAAATAAATTTTGCCC",2,20.64,10.66,-0.1,0.08,2.78,1.19,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAATAACAAATCGAG",1,19.29,10.23,-0.54,0.1,2.78,1.02,0.01,">1 nonsynonymous","E135R K199I",2
"lib1","SARS-CoV-2","GAAATAACATCAAAGT",7,80.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A105D G152V T201Y",3
"lib1","SARS-CoV-2","GAAATAACATGTATAG",2,19.33,9.23,-1.53,0.08,2.86,1.14,0,">1 nonsynonymous","L60A N130P Y143I",3
"lib1","SARS-CoV-2","GAAATAACCGATAAAG",5,0.93,NA,NA,NA,NA,NA,NA,"stop","V11R R25S L38S D59* Q168G",5
"lib1","SARS-CoV-2","GAAATAACCTGTTAAA",2,55.43,10.77,0.01,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATAACGCCCGTAA",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T G83Y Y91R L125I P149F",5
"lib1","SARS-CoV-2","GAAATAACGTATGCCT",4,1.19,NA,NA,NA,NA,NA,NA,"stop","D59* Q79K",2
"lib1","SARS-CoV-2","GAAATAACTTATGTGA",3,44.04,9.83,-0.94,0.06,2.95,1.04,0,">1 nonsynonymous","T170H K198H",2
"lib1","SARS-CoV-2","GAAATAAGAACGCTAT",1,63.89,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","Y50H D90L N118L F134C Q168E Y178A S200L",7
"lib1","SARS-CoV-2","GAAATAAGGTACAGGT",6,3.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","GAAATAAGTCTTTTTT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","V37* N64Q V103P N110V F134R T148D Q163R",7
"lib1","SARS-CoV-2","GAAATAAGTGTTATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R27G C150*",2
"lib1","SARS-CoV-2","GAAATAAGTTAAATTA",1,30.36,9.1,-1.66,0.13,2.17,1.18,0.01,">1 nonsynonymous","C31S T63R E154M H189C",4
"lib1","SARS-CoV-2","GAAATAATACAGTTGG",1,12.77,10.81,0.04,0.08,2.91,1,0,">1 nonsynonymous","R27T Y91L",2
"lib1","SARS-CoV-2","GAAATAATATCTGATT",4,111.29,10.77,0.01,0.05,2.91,1.06,0,">1 nonsynonymous","I2Q N58E L122G",3
"lib1","SARS-CoV-2","GAAATAATCAATAAGA",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T S29L A105Y",3
"lib1","SARS-CoV-2","GAAATAATCGGTCTAG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","K56S F160* V182H",3
"lib1","SARS-CoV-2","GAAATAATGACTGACT",6,91.78,10.75,-0.01,0.07,2.92,1.02,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","GAAATAATTTAATATA",2,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","GAAATACAAACCTATC",1,28.04,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A33Q L95R N151G",3
"lib1","SARS-CoV-2","GAAATACAACCAATAG",2,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S S69L Y119G V181D",4
"lib1","SARS-CoV-2","GAAATACAATACATTG",6,78.97,10.13,-0.63,0.07,2.71,1.04,0,">1 nonsynonymous","N4A P133A G152F",3
"lib1","SARS-CoV-2","GAAATACACAATCGAC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","G9D A14* L60Q",3
"lib1","SARS-CoV-2","GAAATACACCCTATAA",6,56.06,6,-4.76,1.51,2.28,1.22,0.01,">1 nonsynonymous","D68V A89T F99C",3
"lib1","SARS-CoV-2","GAAATACATCTAGAGG",1,12.6,10.9,0.14,0.09,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATACATTTTGAGG",6,17.01,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","A33Q S53F N107K L183P",4
"lib1","SARS-CoV-2","GAAATACCAGAGCACG",2,122.67,10.51,-0.26,0.03,2.91,1.02,0,">1 nonsynonymous","G166N T201V",2
"lib1","SARS-CoV-2","GAAATACCGCAAAATA",1,28.7,9.7,-1.07,0.11,2.01,1.02,0.01,">1 nonsynonymous","A14T F47V S139K A190T",4
"lib1","SARS-CoV-2","GAAATACCGCATCAAT",8,28.75,10.68,-0.08,0.06,2.85,1.09,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","GAAATACCGTGCCAGT",2,11.79,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2Y R124Y",2
"lib1","SARS-CoV-2","GAAATACGAGAAAACC",1,1.49,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib1","SARS-CoV-2","GAAATACGAGGTGACA",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y F70M Q84H F99S S139F V173W T201G",7
"lib1","SARS-CoV-2","GAAATACGCTACCAGA",8,213.79,10.63,-0.13,0.04,2.9,1.05,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","GAAATACGGAACTCCG",1,6.47,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L57K A89N I104R",3
"lib1","SARS-CoV-2","GAAATACGGCCCTCGG",6,87.05,10.7,-0.07,0.08,2.9,1.04,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","GAAATACTGAATCAAG",1,28.03,10.33,-0.43,0.05,2.89,1.03,0,">1 nonsynonymous","N4L S43N",2
"lib1","SARS-CoV-2","GAAATAGACTCATTGA",3,16.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G83V L95A D112S",3
"lib1","SARS-CoV-2","GAAATAGATTTCGGCG",3,67.24,10.66,-0.1,0.05,2.89,1.08,0,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","GAAATAGCAAGCTGAC",2,7.8,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","R27E S45V V71I A89R",4
"lib1","SARS-CoV-2","GAAATAGCATAACAAC",5,149.91,10.4,-0.37,0.04,2.89,1.02,0,">1 nonsynonymous","K26L V37Y D90S",3
"lib1","SARS-CoV-2","GAAATAGCCGAGTAAA",2,75.58,10.03,-0.73,0.09,2.33,1.02,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GAAATAGCCGCATTGT",4,34.73,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S147V Y165N V180Q",3
"lib1","SARS-CoV-2","GAAATAGCTAACATAA",2,8.97,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","K48G Y91M V103S",3
"lib1","SARS-CoV-2","GAAATAGCTTATTACG",6,54.13,6,-4.76,1.39,1.5,1.18,0.01,">1 nonsynonymous","G9I F17P P82L",3
"lib1","SARS-CoV-2","GAAATAGGACTACAGC",3,0.94,NA,NA,NA,NA,NA,NA,"stop","P54G N64V S129* P161F",4
"lib1","SARS-CoV-2","GAAATAGGATAGGTAC",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Y E141A",2
"lib1","SARS-CoV-2","GAAATAGTACGCTAAT",14,7.07,NA,NA,NA,NA,NA,NA,"stop","L5Y N64L D90Y N107* S139A",5
"lib1","SARS-CoV-2","GAAATAGTACTGAGAA",1,23.59,8.29,-2.48,0.24,1.84,1.27,0.02,">1 nonsynonymous","L5Y L38M C61G N120I E141R",5
"lib1","SARS-CoV-2","GAAATAGTCAAAGAAG",4,145.91,10.81,0.04,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATAGTCGCTAGAG",6,50.1,10.38,-0.39,0.04,2.9,1.05,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","GAAATAGTGCAAAATA",7,13.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1P T15D L60E N110D L125M Q144R F167R L188P",8
"lib1","SARS-CoV-2","GAAATAGTTGGAGCAG",2,9.56,8.38,-2.38,0.21,2.71,1.22,0.02,">1 nonsynonymous","G9E P149S Y175Q",3
"lib1","SARS-CoV-2","GAAATATAACGCCAGG",4,142.78,8.85,-1.92,0.16,1.5,1.09,0.01,">1 nonsynonymous","D90G Y178I",2
"lib1","SARS-CoV-2","GAAATATAACTGGAAT",4,39.37,10.87,0.1,0.1,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATATAAGGTGTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92M F156S",2
"lib1","SARS-CoV-2","GAAATATAATCTCAGG",2,40.03,10.65,-0.12,0.07,2.77,1.06,0,">1 nonsynonymous","P149R T201A",2
"lib1","SARS-CoV-2","GAAATATACAATATAT",3,29.74,9.66,-1.1,0.15,1.99,1.14,0.01,">1 nonsynonymous","Y39Q T100H Y165W",3
"lib1","SARS-CoV-2","GAAATATACCCCCTAG",2,21.44,10.34,-0.43,0.11,2.74,1.05,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","GAAATATATGGAATAG",8,138.94,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K56I A81D G172D",3
"lib1","SARS-CoV-2","GAAATATCCATGGTAA",6,164.13,9.33,-1.44,0.16,1.51,1.16,0.01,">1 nonsynonymous","T63A S69V",2
"lib1","SARS-CoV-2","GAAATATCCTTCTAGT",3,81.25,10.77,0.01,0.06,2.88,1.05,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GAAATATCTGACTTTC",1,24.2,6,-4.76,2,1.84,1.08,0,">1 nonsynonymous","F44R D90V F126N P149L",4
"lib1","SARS-CoV-2","GAAATATGAAAATGGA",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89K D98L K132W C158N",4
"lib1","SARS-CoV-2","GAAATATGAACTTAGA",4,99.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37A S69K A105L P177S T201Y",5
"lib1","SARS-CoV-2","GAAATATGCAATTGGG",3,112.39,10.89,0.12,0.08,2.89,1.06,0,">1 nonsynonymous","T55F E141Q S147N P197Q",4
"lib1","SARS-CoV-2","GAAATATGTATTAAAA",4,42.43,9.41,-1.35,0.09,2.73,1.08,0,">1 nonsynonymous","T148W G155C",2
"lib1","SARS-CoV-2","GAAATATTAGGCCCAA",3,966.18,10.56,-0.21,0.03,2.92,1.01,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","GAAATATTATAAAACT",2,33.16,8.07,-2.7,0.24,1.68,1.15,0.02,">1 nonsynonymous","A22T F62S G116K E154D V173D",5
"lib1","SARS-CoV-2","GAAATATTCATAAGGT",4,100.56,10.25,-0.51,0.05,2.75,1.01,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","GAAATCAAAATATGAA",1,75.4,10.35,-0.42,0.06,2.75,1.04,0,">1 nonsynonymous","D90H K128N K198Y",3
"lib1","SARS-CoV-2","GAAATCAAACTCACAG",1,27.87,8.96,-1.81,0.12,1.75,1.12,0.01,">1 nonsynonymous","F17C F160D",2
"lib1","SARS-CoV-2","GAAATCAAGAACGAAC",13,120.63,9.99,-0.77,0.09,2.11,1.04,0,">1 nonsynonymous","P96L S129E H189S",3
"lib1","SARS-CoV-2","GAAATCAAGCAGGTGA",6,2.77,NA,NA,NA,NA,NA,NA,"stop","C61A I88*",2
"lib1","SARS-CoV-2","GAAATCAAGTGAGTTC",4,116.81,8.33,-2.43,0.17,2.69,1.08,0.01,">1 nonsynonymous","K128M Y175A",2
"lib1","SARS-CoV-2","GAAATCACAGCCTATG",7,107.99,10.23,-0.54,0.04,2.93,1.04,0,"1 nonsynonymous","K87G",1
"lib1","SARS-CoV-2","GAAATCACATCCGCAG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","S129* T170I",2
"lib1","SARS-CoV-2","GAAATCAGTCCCCCCA",6,0.95,NA,NA,NA,NA,NA,NA,"stop","S19M F47* V77Y",3
"lib1","SARS-CoV-2","GAAATCATAAAATCAC",3,85.27,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T15D S29W V71D",3
"lib1","SARS-CoV-2","GAAATCATATATGCAT",2,17.78,8.88,-1.89,0.21,1.5,1.02,0.03,">1 nonsynonymous","I2F Y35K F62T E141Q T201V",5
"lib1","SARS-CoV-2","GAAATCATGCAAAATG",1,62.26,10.77,0.01,0.13,2.79,1.05,0.01,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","GAAATCATTAACAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","D90S C150*",2
"lib1","SARS-CoV-2","GAAATCATTTTCGATA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","A14T D97* N120S G196V",4
"lib1","SARS-CoV-2","GAAATCCAAAACCAAC",4,73,9.03,-1.73,0.09,2.76,1.11,0,">1 nonsynonymous","Y119L V173H",2
"lib1","SARS-CoV-2","GAAATCCAATAAGACT",10,71.79,10.27,-0.49,0.04,2.92,1,0,">1 nonsynonymous","N30C V37M N64R",3
"lib1","SARS-CoV-2","GAAATCCCAGATGCAA",2,33.43,7.4,-3.36,0.41,1.5,1.04,0.06,">1 nonsynonymous","D34K V173Y Y178P",3
"lib1","SARS-CoV-2","GAAATCCGAAATCTTA",12,12.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33R V103A F167H",3
"lib1","SARS-CoV-2","GAAATCCGGGCCGGCT",2,142.95,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9C A67F F99K W106T V115P Q176L",6
"lib1","SARS-CoV-2","GAAATCCGTAACATAA",7,0,NA,NA,NA,NA,NA,NA,"stop","Y50* V103P N118I",3
"lib1","SARS-CoV-2","GAAATCCTCAATGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","GAAATCCTCCACAATC",1,22.38,6,-4.76,1.27,2,1.06,0,">1 nonsynonymous","C61L E135L N157Y F160L V173L",5
"lib1","SARS-CoV-2","GAAATCCTGAAACGAG",2,29.13,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","F62C G86R P96H E141V",4
"lib1","SARS-CoV-2","GAAATCCTGCGAATGG",15,224.02,10.12,-0.65,0.04,2.92,1.03,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","GAAATCCTGGCCGCCA",1,40.92,6,-4.76,0.81,1.5,1.1,0.01,">1 nonsynonymous","F99D I104G Y178M",3
"lib1","SARS-CoV-2","GAAATCCTTGTAACAA",2,34.36,10.49,-0.28,0.06,2.96,1.02,0,"1 nonsynonymous","A18F",1
"lib1","SARS-CoV-2","GAAATCGATACCTTCA",3,55.2,6,-4.76,1.98,1.5,1.13,0.02,">1 nonsynonymous","S69R K87N G117L",3
"lib1","SARS-CoV-2","GAAATCGCAAACCGTG",7,78.32,10.08,-0.68,0.07,2.57,1.03,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","GAAATCGCTGGATATA",2,23.18,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N58V I88T I104S",3
"lib1","SARS-CoV-2","GAAATCGTATCAATAG",2,16.82,6.05,-4.71,0.75,1.5,1.06,0.01,">1 nonsynonymous","K48L R127G G146L",3
"lib1","SARS-CoV-2","GAAATCGTCCTTAACA",1,34.48,6.21,-4.55,0.53,1.5,1.18,0.02,">1 nonsynonymous","C158D G172K",2
"lib1","SARS-CoV-2","GAAATCTAAAAATTAT",9,233.11,10.76,0,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATCTAAGCCCCAA",2,23.82,10.21,-0.56,0.08,2.79,1.02,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","GAAATCTAATTGAGCT",14,159.16,10.31,-0.46,0.05,2.84,1.02,0,">1 nonsynonymous","T15L N64R",2
"lib1","SARS-CoV-2","GAAATCTATGCAAATA",1,17.94,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N58S R73T D90I W106V S129Q",5
"lib1","SARS-CoV-2","GAAATCTATTCACAGT",2,31.62,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N30M G86L E141P",3
"lib1","SARS-CoV-2","GAAATCTCTGGCCTTA",2,0.18,NA,NA,NA,NA,NA,NA,"stop","R124N C158*",2
"lib1","SARS-CoV-2","GAAATCTTAGAGTTAC",5,33.33,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S45N L57V L95K Y143Q",4
"lib1","SARS-CoV-2","GAAATCTTTACTAATA",12,340.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N58R S139Q P149Y Y175T",4
"lib1","SARS-CoV-2","GAAATCTTTATAATCT",4,20.28,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","N13I F70R",2
"lib1","SARS-CoV-2","GAAATGAAAAATATGA",2,15.95,6.49,-4.27,0.8,1.61,1.14,0.07,">1 nonsynonymous","G101L F126T",2
"lib1","SARS-CoV-2","GAAATGAAATATATCA",1,12.96,7.8,-2.96,0.51,1.5,1.09,0.07,">1 nonsynonymous","S19M D90L E141Y",3
"lib1","SARS-CoV-2","GAAATGAACTGCTTTA",3,5.98,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C49K K132V",2
"lib1","SARS-CoV-2","GAAATGAAGGCCAAAA",2,39.36,9.42,-1.34,0.1,2.73,1.14,0,">1 nonsynonymous","D97Q Q176H",2
"lib1","SARS-CoV-2","GAAATGAAGTGCACAA",2,82.39,10.18,-0.59,0.07,2.96,1,0,">1 nonsynonymous","A42F P54L L60A K87S",4
"lib1","SARS-CoV-2","GAAATGACAGTCGTGA",3,39.96,10.79,0.03,0.07,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATGAGAATGCCAC",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N I104N Y119G",3
"lib1","SARS-CoV-2","GAAATGAGTAAAAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","C6V A42W D68W T100* N120A",5
"lib1","SARS-CoV-2","GAAATGAGTCGCTTTT",7,23.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13R G86E",2
"lib1","SARS-CoV-2","GAAATGATAACCCTAG",2,42.05,10.67,-0.1,0.03,2.93,1.02,0,">1 nonsynonymous","A22R R73K",2
"lib1","SARS-CoV-2","GAAATGATAGATTAAT",3,73.52,10.76,-0.01,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAATGATATTCATAG",3,62.25,6,-4.76,1.86,1.5,1.21,0.03,">1 nonsynonymous","C158D G172K",2
"lib1","SARS-CoV-2","GAAATGATCACTACCA",2,52.43,9.7,-1.06,0.09,2.31,1.13,0,">1 nonsynonymous","E10V Y91H",2
"lib1","SARS-CoV-2","GAAATGATGAAACAAG",8,123.94,9.87,-0.89,0.1,2.21,1.05,0,">1 nonsynonymous","W106F S164L",2
"lib1","SARS-CoV-2","GAAATGATTTTTATTT",6,54.91,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G74I D90P D98R I138A",4
"lib1","SARS-CoV-2","GAAATGCAAGATAACA",2,17.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A14E N92M",2
"lib1","SARS-CoV-2","GAAATGCAAGTTCTCC",1,15.4,6.51,-4.25,0.31,3,1.06,0.02,">1 nonsynonymous","S36W N58K W106V Y121S Y159Q",5
"lib1","SARS-CoV-2","GAAATGCACTTTATAT",7,135.59,10.2,-0.56,0.05,2.66,1.03,0,">1 nonsynonymous","A33F L95T F160D",3
"lib1","SARS-CoV-2","GAAATGCACTTTTGAA",8,96.55,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A81P F160A",2
"lib1","SARS-CoV-2","GAAATGCCTAGTATTG",5,80.33,8.84,-1.92,0.2,1.5,1.19,0.02,">1 nonsynonymous","P7V D90I",2
"lib1","SARS-CoV-2","GAAATGCCTCCGTAAT",6,21.97,6.63,-4.14,0.64,1.5,1.12,0.04,">1 nonsynonymous","V115E R124A",2
"lib1","SARS-CoV-2","GAAATGCCTTAGCATA",1,11.38,10.73,-0.04,0.06,2.89,1.06,0,"1 nonsynonymous","G174N",1
"lib1","SARS-CoV-2","GAAATGCGAGATAACT",6,3.62,NA,NA,NA,NA,NA,NA,"stop","C6I Y91*",2
"lib1","SARS-CoV-2","GAAATGCGCTCAAATC",3,94.04,10.06,-0.7,0.08,2.74,1.02,0,">1 nonsynonymous","S41I G174W",2
"lib1","SARS-CoV-2","GAAATGCGTATACTGG",3,7.52,6.39,-4.37,0.75,1.5,1.1,0.05,">1 nonsynonymous","C31P N40S D90T S113V",4
"lib1","SARS-CoV-2","GAAATGCGTCTTATTT",2,23.49,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G86T G155V T170H",3
"lib1","SARS-CoV-2","GAAATGCTCATTCTCG",7,37.6,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A22L P96S D137R",3
"lib1","SARS-CoV-2","GAAATGCTTGATTTGT",5,1.48,NA,NA,NA,NA,NA,NA,"stop","L5* T15F S41V K128I",4
"lib1","SARS-CoV-2","GAAATGGACGTTATCG",6,239.55,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N92H N171S",2
"lib1","SARS-CoV-2","GAAATGGACTTGACTG",1,5.24,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F12L L95P",2
"lib1","SARS-CoV-2","GAAATGGCCACGGGGA",6,188.31,8.34,-2.42,0.22,1.7,1.17,0.02,">1 nonsynonymous","L60K Q176T",2
"lib1","SARS-CoV-2","GAAATGGCCCAAGGTG",2,65.2,6.3,-4.47,0.64,1.5,1.2,0.03,">1 nonsynonymous","F8I R136V F167G V173S",4
"lib1","SARS-CoV-2","GAAATGGGGTGAAACA",6,65.58,6,-4.76,1.77,1.5,1.2,0.02,">1 nonsynonymous","N4H Y143C G155V V180C",4
"lib1","SARS-CoV-2","GAAATGGTAATAGACG",5,67.32,10.17,-0.6,0.07,2.85,1,0,">1 nonsynonymous","Y35N S129A V173I",3
"lib1","SARS-CoV-2","GAAATGGTCAAGTCCT",3,96.29,10.04,-0.73,0.05,2.76,1.04,0,">1 nonsynonymous","I142L N151R Y178V",3
"lib1","SARS-CoV-2","GAAATGTAAATCGAAA",8,106.55,10.81,0.04,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATGTAACGAAGTG",1,9.21,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L5Q Y35S P82Q T85K V103T E141T",6
"lib1","SARS-CoV-2","GAAATGTATCAGGTCA",10,109.3,6.72,-4.05,0.31,1.5,1.15,0.01,">1 nonsynonymous","S36L D112H",2
"lib1","SARS-CoV-2","GAAATGTATTCAGATT",4,71.98,10.01,-0.76,0.1,2.5,1.01,0,">1 nonsynonymous","T3E S41Y A105I T201R",4
"lib1","SARS-CoV-2","GAAATGTCAATATTCC",4,42.6,6.04,-4.72,1.69,1.5,1.34,0.06,">1 nonsynonymous","K87R V103Y",2
"lib1","SARS-CoV-2","GAAATGTCAGTTGATG",5,67.58,10.07,-0.69,0.04,2.85,1.05,0,">1 nonsynonymous","F62N N130A G174E",3
"lib1","SARS-CoV-2","GAAATGTCCCCTTCCG",13,103.31,8.84,-1.92,0.31,1.5,1,0.04,">1 nonsynonymous","G86Y L183V",2
"lib1","SARS-CoV-2","GAAATGTCTTATTTGC",5,32.52,8.69,-2.07,0.14,2.69,1.05,0.01,">1 nonsynonymous","T15C Y119P",2
"lib1","SARS-CoV-2","GAAATGTGAGAAGTTG",1,14.37,9.74,-1.02,0.28,2.07,1.03,0.05,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","GAAATGTGCTTAAGCA",2,24.9,9.23,-1.54,0.11,2.88,1.09,0.01,">1 nonsynonymous","L125Y N151L",2
"lib1","SARS-CoV-2","GAAATGTGGGCTCACC",2,14.39,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I80F G166S",2
"lib1","SARS-CoV-2","GAAATTAAAAAAATCT",4,52.08,10.74,-0.03,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATTAAAATATAGT",8,109.31,10.75,-0.02,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATTAACACTCAAG",5,53.47,6.27,-4.5,0.51,1.5,1.06,0.01,">1 nonsynonymous","D59A Y119W G146A C150G",4
"lib1","SARS-CoV-2","GAAATTAAGAAAACGT",2,18.21,7.5,-3.27,0.42,1.5,1,0.05,">1 nonsynonymous","L38T G83I I142L",3
"lib1","SARS-CoV-2","GAAATTAAGAGAATTT",9,34.63,6.88,-3.89,0.45,1.5,1.17,0.05,">1 nonsynonymous","V20W A89T G146C",3
"lib1","SARS-CoV-2","GAAATTAATAAATTAA",3,41.48,7.79,-2.97,0.31,1.5,1.16,0.05,">1 nonsynonymous","A22E N107S G117S",3
"lib1","SARS-CoV-2","GAAATTAATAGTAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2M E10* Y21A S43A K114L Y121L N151K V173*",8
"lib1","SARS-CoV-2","GAAATTACAAAATATA",5,17.48,9.66,-1.1,0.16,2.57,1.12,0.01,">1 nonsynonymous","N120R E154R T201W",3
"lib1","SARS-CoV-2","GAAATTACCAACCGAG",4,51.7,10.75,-0.01,0.05,2.93,1.01,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","GAAATTACCCGACCGG",2,35.82,10.08,-0.68,0.09,2.78,1.01,0,">1 nonsynonymous","G9V C31S C61T",3
"lib1","SARS-CoV-2","GAAATTACGGAATTAA",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S29A N92S C158G",4
"lib1","SARS-CoV-2","GAAATTACTTTATCCT",4,46.05,6.27,-4.49,0.67,1.5,1.16,0.03,">1 nonsynonymous","T63F A105F L131V T148S",4
"lib1","SARS-CoV-2","GAAATTAGACAAATGA",8,184.68,9.09,-1.68,0.06,2.72,1.12,0,">1 nonsynonymous","A33L Y119H G146A",3
"lib1","SARS-CoV-2","GAAATTAGACCCAAAT",2,5.71,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A14F V77P Y178T",3
"lib1","SARS-CoV-2","GAAATTAGCACGTGAT",1,9.18,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K26L Y123E N157P",3
"lib1","SARS-CoV-2","GAAATTAGTATTACAC",3,14.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T100P V182L",2
"lib1","SARS-CoV-2","GAAATTAGTCTATCTA",12,217.78,9.27,-1.49,0.06,2.86,1.11,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","GAAATTATAAACAGTG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A14V E135* N171L",3
"lib1","SARS-CoV-2","GAAATTATAGAACATT",2,16.64,9.05,-1.71,0.09,2.88,1.08,0,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","GAAATTATAGCAAAAA",1,18.97,10.01,-0.75,0.1,2.92,1,0,">1 nonsynonymous","Q84T N120F T170S",3
"lib1","SARS-CoV-2","GAAATTATATAAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19M S45C P82* A89T",4
"lib1","SARS-CoV-2","GAAATTATGCTGAGAA",8,61.89,10.76,-0.01,0.08,2.8,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAATTATGTACATAT",1,80.9,7.45,-3.31,0.26,1.5,1.06,0.02,">1 nonsynonymous","I28L N120V Y175K",3
"lib1","SARS-CoV-2","GAAATTATTGTCAAAC",1,8.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53P N107W",2
"lib1","SARS-CoV-2","GAAATTCAAATTCCTT",4,40.87,6,-4.76,1.54,3,1.09,0,">1 nonsynonymous","V37I Y143S F156E N171K",4
"lib1","SARS-CoV-2","GAAATTCAACAACCAA",2,15.42,6,-4.76,1.37,3,1.04,0,"1 nonsynonymous","C102P",1
"lib1","SARS-CoV-2","GAAATTCACATTGCGC",2,58.16,10.45,-0.31,0.05,2.92,1.06,0,">1 nonsynonymous","D98P T140S",2
"lib1","SARS-CoV-2","GAAATTCACCTTGTAT",5,46.72,6.36,-4.4,0.48,1.5,1.25,0.01,">1 nonsynonymous","R25V T148N",2
"lib1","SARS-CoV-2","GAAATTCAGAAAATGC",8,45.18,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6V T55S K94S S139C N151Y",5
"lib1","SARS-CoV-2","GAAATTCAGACATACA",1,6.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V11N V71K A105D R136P",4
"lib1","SARS-CoV-2","GAAATTCAGGACATAC",4,54.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L95S D112Y A145D Y178K",4
"lib1","SARS-CoV-2","GAAATTCAGTACAAAC",1,10.3,9.73,-1.04,0.09,2.77,1,0.01,">1 nonsynonymous","N64T Q84I S147V E154L",4
"lib1","SARS-CoV-2","GAAATTCCACTACTAA",2,12.2,8.72,-2.05,0.33,1.5,1.5,0.06,"1 nonsynonymous","W23T",1
"lib1","SARS-CoV-2","GAAATTCCTCACTGCA",4,32.41,8.36,-2.41,0.26,1.88,1.15,0.02,">1 nonsynonymous","D75Y Y121T",2
"lib1","SARS-CoV-2","GAAATTCGAACAAGCT",3,66.21,10.66,-0.1,0.05,2.97,1,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","GAAATTCGAACGCCAT",1,21.69,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N1G Y119M L162S P197T",4
"lib1","SARS-CoV-2","GAAATTCGTCCAAGAT",1,9.73,6.11,-4.66,0.6,1.5,1.05,0.01,">1 nonsynonymous","V65T N107Q G152C",3
"lib1","SARS-CoV-2","GAAATTCTAAAGGCTT",4,137.86,10.78,0.02,0.07,2.89,1.07,0,"1 nonsynonymous","V153E",1
"lib1","SARS-CoV-2","GAAATTCTAACTGTGC",10,168.07,7.21,-3.55,0.08,1.8,1.14,0,">1 nonsynonymous","K87T C158T",2
"lib1","SARS-CoV-2","GAAATTCTAATGAATT",5,50.68,9.82,-0.95,0.1,2.12,1.13,0,">1 nonsynonymous","S41V Y50H",2
"lib1","SARS-CoV-2","GAAATTCTCGTTGGAA",9,110.85,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D97L C150Y N157L",3
"lib1","SARS-CoV-2","GAAATTCTGAAAGAAC",1,14.74,8.81,-1.95,0.3,1.5,1.07,0.02,">1 nonsynonymous","A67I P82T",2
"lib1","SARS-CoV-2","GAAATTCTGGGTCGAC",5,12.58,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","F8A V65A G101H",3
"lib1","SARS-CoV-2","GAAATTGAAAGCAAAA",2,12.71,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S36C N118C Q168V",3
"lib1","SARS-CoV-2","GAAATTGAACCGCGCA",6,94.8,6.33,-4.44,0.4,1.5,1.18,0.01,">1 nonsynonymous","L95I C150S",2
"lib1","SARS-CoV-2","GAAATTGAACTGCCCA",2,9.54,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9C Y50G Y93V G146E",4
"lib1","SARS-CoV-2","GAAATTGAATGCACAT",2,20.01,9.82,-0.95,0.12,2.04,1.08,0,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","GAAATTGATAAACGAT",7,64.88,10.31,-0.45,0.05,2.94,1.02,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","GAAATTGATAGACCAA",3,19.42,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","E10W C61I N157F T201A",4
"lib1","SARS-CoV-2","GAAATTGCTAATAATG",3,31.53,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D59I N64T S108P G152H",4
"lib1","SARS-CoV-2","GAAATTGGAGTGAGAA",1,146.4,10.46,-0.31,0.05,2.92,1.02,0,">1 nonsynonymous","I2V T100E",2
"lib1","SARS-CoV-2","GAAATTGGGTAGTAGA",2,32.86,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F70L D75E Y91N P161I P169G",5
"lib1","SARS-CoV-2","GAAATTGGTAAAACGG",4,43.21,10.14,-0.62,0.09,2.52,1,0,">1 nonsynonymous","S19T N130I",2
"lib1","SARS-CoV-2","GAAATTGGTACACAAA",3,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W C102R N118S V181L",4
"lib1","SARS-CoV-2","GAAATTGTTGTGATAA",2,16.43,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G117P F167M",2
"lib1","SARS-CoV-2","GAAATTTAAAGGAAAA",8,25.36,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","S43Y A105H S113V E154R",4
"lib1","SARS-CoV-2","GAAATTTAACCCCAAT",1,16.73,9.26,-1.5,0.29,1.67,1.2,0.04,">1 nonsynonymous","P82V E141L",2
"lib1","SARS-CoV-2","GAAATTTAAGTAATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y F167L",2
"lib1","SARS-CoV-2","GAAATTTAATGAAAAA",6,69.47,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6Q T63H A81D K94T R127V S139C",6
"lib1","SARS-CoV-2","GAAATTTACCGGCACT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","N4S G9M R73* G86M",4
"lib1","SARS-CoV-2","GAAATTTCAAATTCCG",4,78.58,7.22,-3.54,0.24,1.5,1.2,0.01,">1 nonsynonymous","K26C N107T E154S",3
"lib1","SARS-CoV-2","GAAATTTCCATCTGGC",6,67.9,6.77,-4,0.35,1.5,1.19,0.02,">1 nonsynonymous","D68V S129K",2
"lib1","SARS-CoV-2","GAAATTTCCCAATTCA",2,40.11,10.11,-0.65,0.04,2.88,1.03,0,">1 nonsynonymous","N40Y C61H L122G G155A T201M",5
"lib1","SARS-CoV-2","GAAATTTCGAAATAAG",9,173.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9Q V37R S45R Y121G T140N",5
"lib1","SARS-CoV-2","GAAATTTCGTTTGGCA",1,34.58,10.6,-0.16,0.06,3,1,0,"1 nonsynonymous","N1L",1
"lib1","SARS-CoV-2","GAAATTTGAATTGCGA",7,166.5,10.35,-0.41,0.06,2.94,1.02,0,">1 nonsynonymous","I2N D59Q K87M V173I",4
"lib1","SARS-CoV-2","GAAATTTGCCCACGTA",1,58.29,6.6,-4.17,0.23,1.5,1.14,0.01,">1 nonsynonymous","L95C Y159V",2
"lib1","SARS-CoV-2","GAAATTTGCTCACCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D90L T100Q G174*",3
"lib1","SARS-CoV-2","GAAATTTTCGCAACAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S C49G I72M P82Y L131S",5
"lib1","SARS-CoV-2","GAAATTTTTATTGTAG",4,26.67,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S36W P96L S139Y",3
"lib1","SARS-CoV-2","GAACAAAAAAACACTT",5,3.75,NA,NA,NA,NA,NA,NA,"stop","K48* N64E Y175W",3
"lib1","SARS-CoV-2","GAACAAAAAATTGGAA",4,37.27,10.56,-0.2,0.04,2.94,1.02,0,">1 nonsynonymous","I28W F62K L95I V173I",4
"lib1","SARS-CoV-2","GAACAAAAACGCTATT",2,79.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K56H I142H R179T",3
"lib1","SARS-CoV-2","GAACAAAAACTGACAA",6,9.15,NA,NA,NA,NA,NA,NA,"stop","Q79T Y119S P177*",3
"lib1","SARS-CoV-2","GAACAAAAAGGAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88R P149K",2
"lib1","SARS-CoV-2","GAACAAAAAGTTCATT",11,92.23,8.5,-2.26,0.23,1.5,1.12,0.02,">1 nonsynonymous","F8G S164L",2
"lib1","SARS-CoV-2","GAACAAAACCAAAGTA",3,34.11,9.13,-1.63,0.08,2.93,1.08,0,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","GAACAAAACTCACTCT",1,38.61,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S29M L57V Q84R L131K",4
"lib1","SARS-CoV-2","GAACAAAAGACAGACA",7,2.32,NA,NA,NA,NA,NA,NA,"stop","A81N P96* P133T S139P",4
"lib1","SARS-CoV-2","GAACAAAAGCACAATT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","C49* K56D V103*",3
"lib1","SARS-CoV-2","GAACAAAAGGAACATT",5,151.18,8.81,-1.95,0.06,2.62,1.12,0,">1 nonsynonymous","E10P T55V E141R F156N",4
"lib1","SARS-CoV-2","GAACAAAATCATTAAA",1,5.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S E76G D98L Y121F F185V",5
"lib1","SARS-CoV-2","GAACAAAATGTGATCT",1,58.68,10.32,-0.45,0.06,2.93,1.04,0,">1 nonsynonymous","T55N E141G T148D G166N",4
"lib1","SARS-CoV-2","GAACAAACAAAGGAAG",1,26.54,6,-4.76,2,1.5,1.21,0.04,"1 nonsynonymous","G172T",1
"lib1","SARS-CoV-2","GAACAAACAGAAACCA",3,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y V65G V103D V180N",4
"lib1","SARS-CoV-2","GAACAAACAGAAAGCC",2,7.56,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14L G146W N151V",3
"lib1","SARS-CoV-2","GAACAAACAGACAACT",3,49.03,9.75,-1.02,0.14,2.67,1.07,0.01,">1 nonsynonymous","L5K N64Q G155Y K198Y",4
"lib1","SARS-CoV-2","GAACAAACGCTACAAT",1,12.84,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S29N Y35L T55S A105F Y175I",5
"lib1","SARS-CoV-2","GAACAAACGCTTATGC",1,33.18,10.06,-0.7,0.08,2.12,1,0,">1 nonsynonymous","S36Y L57Y",2
"lib1","SARS-CoV-2","GAACAAACGGGACAGC",7,48.1,9.75,-1.02,0.12,1.88,1.06,0.01,">1 nonsynonymous","F134W Q144L S184R",3
"lib1","SARS-CoV-2","GAACAAACTAACGGCA",11,75.97,10.11,-0.65,0.09,2.66,1.05,0,">1 nonsynonymous","S41L V153C S184I",3
"lib1","SARS-CoV-2","GAACAAACTTAACGAG",1,5.32,6.04,-4.72,0.37,3,1,0,">1 nonsynonymous","K56I F156N L162K",3
"lib1","SARS-CoV-2","GAACAAACTTTGGACC",4,102.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S43A Y91C D97K G146V G166I Y175L",6
"lib1","SARS-CoV-2","GAACAAAGAGCTGTTG",11,86.16,9.84,-0.93,0.12,1.83,1.13,0.01,">1 nonsynonymous","F8M S69A P149L",3
"lib1","SARS-CoV-2","GAACAAAGGACCTACA",11,88.88,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25K C61G Y119M",3
"lib1","SARS-CoV-2","GAACAAAGGCACAGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L N130P A145T",3
"lib1","SARS-CoV-2","GAACAAATAAATGTCC",5,63.96,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20G S45A K56V P82H I142G",5
"lib1","SARS-CoV-2","GAACAAATAATCACAC",2,45.55,6,-4.76,2,1.5,1.31,0.04,"1 nonsynonymous","P177R",1
"lib1","SARS-CoV-2","GAACAAATAATTACTA",3,52.61,8.64,-2.12,0.18,1.9,1.14,0.01,">1 nonsynonymous","R27K Y35T N107P G116R",4
"lib1","SARS-CoV-2","GAACAAATACTCAATC",5,71.1,9.79,-0.98,0.12,1.93,1.07,0,"1 nonsynonymous","K94L",1
"lib1","SARS-CoV-2","GAACAAATCATTGCTA",3,57.85,10.72,-0.04,0.06,2.94,1.03,0,">1 nonsynonymous","D90M T201K",2
"lib1","SARS-CoV-2","GAACAAATGACCAATC",3,49.07,10.28,-0.48,0.08,2.76,1.05,0,">1 nonsynonymous","V103I G152R",2
"lib1","SARS-CoV-2","GAACAAATTATCGCCA",1,13.69,6,-4.76,1.27,1.78,1.02,0.01,">1 nonsynonymous","C6V S43D Y119L P149F Y159R H189G",6
"lib1","SARS-CoV-2","GAACAAATTGAGTTTG",2,15.86,9.16,-1.61,0.25,1.5,1.15,0.04,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","GAACAACAAGACGCTA",5,101.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19F S36V Y66S",3
"lib1","SARS-CoV-2","GAACAACACGAAATTC",5,110.32,6.48,-4.28,0.54,1.5,1.18,0.03,">1 nonsynonymous","V32G Y39N V103F",3
"lib1","SARS-CoV-2","GAACAACACTAGGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","GAACAACAGTCTACCG",6,128.75,10.57,-0.19,0.04,2.92,1.03,0,">1 nonsynonymous","L5H N151I",2
"lib1","SARS-CoV-2","GAACAACCGACGAATT",17,136.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31H V77F T100H E135V",4
"lib1","SARS-CoV-2","GAACAACGGACGTAGT",1,9.52,10.25,-0.51,0.16,2.72,1.14,0.02,">1 nonsynonymous","S41E K56W",2
"lib1","SARS-CoV-2","GAACAACGTTTAAAGC",4,72.9,10.29,-0.47,0.06,2.9,1.06,0,">1 nonsynonymous","Q84R K87A",2
"lib1","SARS-CoV-2","GAACAACGTTTGAAGC",4,142.3,10.13,-0.63,0.07,2.69,1.03,0,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","GAACAACTAATAGAAG",4,49.7,7.41,-3.36,0.28,1.5,1.08,0.02,">1 nonsynonymous","I2S S36C C61E P82V",4
"lib1","SARS-CoV-2","GAACAACTACCGCTTT",2,20,8.49,-2.28,0.09,2.19,1.06,0.01,">1 nonsynonymous","R78V F99Y Y119T N151M F160R",5
"lib1","SARS-CoV-2","GAACAACTAGAGTTCA",8,92.24,6.06,-4.7,0.77,1.5,1.13,0.01,">1 nonsynonymous","R124H R136L",2
"lib1","SARS-CoV-2","GAACAACTCACGATAG",4,124.4,10.58,-0.18,0.03,2.95,1,0,">1 nonsynonymous","S43F N120F",2
"lib1","SARS-CoV-2","GAACAACTCTATTACT",4,193.51,10.98,0.22,0.06,2.88,1.05,0,">1 nonsynonymous","Y50W Q163A",2
"lib1","SARS-CoV-2","GAACAAGAGATACTCT",1,16.47,10.55,-0.21,0.09,2.95,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAACAAGATACAGTAA",1,7.13,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49I C61M",2
"lib1","SARS-CoV-2","GAACAAGATATCGACA",2,20.55,10.9,0.13,0.06,2.97,1,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","GAACAAGCAAAGAGTG",1,9.2,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","S36D L60M D98M Y119Q F167R",5
"lib1","SARS-CoV-2","GAACAAGCATGCTTAA",7,49.29,6,-4.76,1.17,1.5,1.21,0.02,">1 nonsynonymous","N4V T55L Y143V G155I Y165G",5
"lib1","SARS-CoV-2","GAACAAGCCATTGACA",3,17.35,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","T3N A14Y K26R K56M Y91Q Y121W",6
"lib1","SARS-CoV-2","GAACAAGGCTACTAAA",1,30.36,10.72,-0.05,0.11,2.92,1.02,0,">1 nonsynonymous","R16Q V37S P169T",3
"lib1","SARS-CoV-2","GAACAAGGTCAGAGTT",11,102.14,9.25,-1.52,0.08,2.72,1.1,0,">1 nonsynonymous","P7W S113G",2
"lib1","SARS-CoV-2","GAACAAGTGACTCACA",2,50.9,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P7V V37M W106R F167A P197H",5
"lib1","SARS-CoV-2","GAACAATAAGAAATAC",3,26.11,6.62,-4.14,0.44,1.5,1.08,0.04,">1 nonsynonymous","F12K D68A I88G S147N",4
"lib1","SARS-CoV-2","GAACAATAAGCACACG",1,2.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAACAATACCCCAACC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L N157S",2
"lib1","SARS-CoV-2","GAACAATACCCTAATT",5,52.62,10.48,-0.28,0.06,2.88,1.04,0,">1 nonsynonymous","A42D K56F",2
"lib1","SARS-CoV-2","GAACAATAGACGACTG",1,5.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33S S53M P149S F156P Q176L",5
"lib1","SARS-CoV-2","GAACAATATAAAGATG",7,61.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6K Y39D Y50N P54K K128W G166R",6
"lib1","SARS-CoV-2","GAACAATATGGATTAT",5,40.16,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y50T V77R K128N",3
"lib1","SARS-CoV-2","GAACAATCCTATCTGG",2,11.12,10.75,-0.01,0.04,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACAATGAACTAAAG",13,139.23,10.72,-0.05,0.05,2.95,1.01,0,">1 nonsynonymous","I28L L131V",2
"lib1","SARS-CoV-2","GAACAATTAGCGGATA",3,28.26,10.76,0,0.1,2.9,1.04,0.01,"1 nonsynonymous","D59K",1
"lib1","SARS-CoV-2","GAACAATTATACTTGG",6,134.41,10.38,-0.39,0.09,2.73,1,0,">1 nonsynonymous","I72T Y123F",2
"lib1","SARS-CoV-2","GAACAATTGCACCAAC",1,21.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S36Q G51I I88R R127P C150V Q168W",6
"lib1","SARS-CoV-2","GAACAATTGCTGATTA",5,19.03,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N1E A14S N92S G116D G172Y T201I",6
"lib1","SARS-CoV-2","GAACAATTTGATGATT",9,29.28,6.31,-4.46,0.7,1.5,1.18,0.04,">1 nonsynonymous","E10Q Y93C E154T",3
"lib1","SARS-CoV-2","GAACACAAAAAGCGAC",4,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T148S C158G V180D",3
"lib1","SARS-CoV-2","GAACACAAACCAAAAT",2,30.34,10.68,-0.08,0.07,2.89,1.04,0,">1 nonsynonymous","I104C K198Y",2
"lib1","SARS-CoV-2","GAACACAACAATTAAC",4,12.41,6.08,-4.69,1.95,1.5,1.15,0.08,">1 nonsynonymous","G86F L122N F156R Q163N",4
"lib1","SARS-CoV-2","GAACACACCCCCGCTC",6,32.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","GAACACAGACCTTGCG",7,91.31,10.81,0.04,0.08,2.86,1.04,0,"1 nonsynonymous","N151K",1
"lib1","SARS-CoV-2","GAACACAGCCCTAATT",4,56.25,9.71,-1.06,0.2,1.95,1.11,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","GAACACAGGAAATGTT",6,53.25,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y119K R136F L183H",3
"lib1","SARS-CoV-2","GAACACAGTTAACTTG",8,10.6,9.48,-1.28,0.26,1.5,1,0.04,">1 nonsynonymous","F17T A105F P177E",3
"lib1","SARS-CoV-2","GAACACATATAAAGTT",4,3.58,NA,NA,NA,NA,NA,NA,"stop","F12G R27K N118* F160C V173S",5
"lib1","SARS-CoV-2","GAACACATCCATGGGA",8,39.34,6.51,-4.25,0.61,1.5,1.08,0.04,">1 nonsynonymous","W23R N40T N64L I88L G116S I142F S184L",7
"lib1","SARS-CoV-2","GAACACATGAAATGAT",10,52.7,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T63C D90H V103Y L122T L131W",5
"lib1","SARS-CoV-2","GAACACATGACGTCGC",3,84.37,10.25,-0.51,0.06,2.84,1.05,0,">1 nonsynonymous","T55R R136S",2
"lib1","SARS-CoV-2","GAACACATTATAATGT",3,150.27,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44H N120Y D137T",3
"lib1","SARS-CoV-2","GAACACATTTGCGATA",4,81.92,10.78,0.02,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACACCAAGATACTA",4,41.31,6,-4.76,2,1.5,1.44,0.07,">1 nonsynonymous","P7L C158N",2
"lib1","SARS-CoV-2","GAACACCACACGCGGC",7,75.7,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","F12V S53H F99R",3
"lib1","SARS-CoV-2","GAACACCACTTACCAT",4,22.05,6.95,-3.82,0.47,1.5,1.12,0.06,">1 nonsynonymous","F12S I72L N118K",3
"lib1","SARS-CoV-2","GAACACCAGACCCCGC",1,16.14,6.39,-4.37,0.62,1.5,1.19,0.04,">1 nonsynonymous","F12R D98P",2
"lib1","SARS-CoV-2","GAACACCATTGAATCA",3,43.97,6,-4.76,1,1.5,1.18,0.01,">1 nonsynonymous","A14N V77M N107L",3
"lib1","SARS-CoV-2","GAACACCCTTCGACAG",3,47.42,6,-4.76,1.74,1.5,1.17,0.01,">1 nonsynonymous","Y21W Q84L R127Q",3
"lib1","SARS-CoV-2","GAACACCGACAATAAA",2,5.58,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","W106D S129F G155I",3
"lib1","SARS-CoV-2","GAACACCGATGCAGAC",4,65.98,10.1,-0.67,0.07,2.74,1.06,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","GAACACCGCTGATTAG",7,56.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V32G E76S A81V N118T R127C S147V Y165S F185S",8
"lib1","SARS-CoV-2","GAACACCTAAATAAAT",1,15.03,8.79,-1.97,0.32,1.5,1.11,0.04,">1 nonsynonymous","R25A F134R F160I",3
"lib1","SARS-CoV-2","GAACACCTCTAACTTT",1,0.85,NA,NA,NA,NA,NA,NA,"stop","K114* Y175K G196R",3
"lib1","SARS-CoV-2","GAACACCTGGTACGTG",12,3.06,NA,NA,NA,NA,NA,NA,"stop","V77* T85W E135R",3
"lib1","SARS-CoV-2","GAACACCTGTTTAGAA",9,70.76,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C61V Y123G V182F K198W",4
"lib1","SARS-CoV-2","GAACACGAAAGCACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V G117C I142T",3
"lib1","SARS-CoV-2","GAACACGCGAGATGTG",4,8.16,10.54,-0.22,0.39,1.5,1,0.06,">1 nonsynonymous","S19G F99Y",2
"lib1","SARS-CoV-2","GAACACGCTAACAACG",1,91.78,10.64,-0.12,0.05,2.82,1.06,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","GAACACGGGGATAGAA",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C I88Q",2
"lib1","SARS-CoV-2","GAACACGGGTCCATAA",1,20.23,10.84,0.08,0.12,2.8,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAACACGGTGGCTAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* N130G G174Q",3
"lib1","SARS-CoV-2","GAACACGGTTGCGAAA",11,4.48,NA,NA,NA,NA,NA,NA,"stop","F160* S200Y",2
"lib1","SARS-CoV-2","GAACACGTTCTGTCCA",4,44.62,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6D A18M P133T N157R",4
"lib1","SARS-CoV-2","GAACACTCCACAACGT",4,20.93,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A33C V103S Y165S",3
"lib1","SARS-CoV-2","GAACACTCCAGCTGCG",9,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q A105L",2
"lib1","SARS-CoV-2","GAACACTCTTCCAAAC",2,0.31,NA,NA,NA,NA,NA,NA,"stop","C6R V37L C49R I104L K114T L122* P177L",7
"lib1","SARS-CoV-2","GAACACTGCTATCTAA",6,80.47,10.04,-0.73,0.07,2.73,1,0,">1 nonsynonymous","F44Y Q144L",2
"lib1","SARS-CoV-2","GAACACTTATAAGTCC",1,34.36,10.72,-0.05,0.09,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACACTTCATTAGCT",3,103.6,10.14,-0.63,0.05,2.9,1,0,">1 nonsynonymous","S43N G83V",2
"lib1","SARS-CoV-2","GAACACTTGTCCGATT",5,1.12,NA,NA,NA,NA,NA,NA,"stop","K48* E76C Q84M D90* Y119T S200V",6
"lib1","SARS-CoV-2","GAACAGAAAAGATGAT",6,69.63,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14S G86V T201N",3
"lib1","SARS-CoV-2","GAACAGAAGATTCAAC",3,55.91,10.65,-0.11,0.05,2.94,1.02,0,">1 nonsynonymous","S41G F62A",2
"lib1","SARS-CoV-2","GAACAGAAGTTTTCTT",3,23.42,10.22,-0.54,0.12,2.6,1.04,0.01,">1 nonsynonymous","I104C K128L",2
"lib1","SARS-CoV-2","GAACAGACAATAGTAT",2,104.06,9.38,-1.39,0.09,2.47,1.12,0,">1 nonsynonymous","T148D G152P",2
"lib1","SARS-CoV-2","GAACAGACACCGGTCC",3,40.16,9.84,-0.92,0.13,2,1.06,0.01,">1 nonsynonymous","N24E P82A",2
"lib1","SARS-CoV-2","GAACAGAGCACAAGCT",4,32.8,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V71K Y93E",2
"lib1","SARS-CoV-2","GAACAGAGTACTGTCT",5,35.79,10.06,-0.71,0.13,2.84,1,0.01,"1 nonsynonymous","C6V",1
"lib1","SARS-CoV-2","GAACAGATATACCCTG",3,69.43,10.7,-0.06,0.06,2.91,1.05,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","GAACAGATATTATTAA",11,1.41,NA,NA,NA,NA,NA,NA,"stop","S41T S53* C150L",3
"lib1","SARS-CoV-2","GAACAGATCAAATAAC",6,85.55,10.84,0.07,0.08,2.87,1.07,0,">1 nonsynonymous","N58D F160N",2
"lib1","SARS-CoV-2","GAACAGATCACTCTTT",6,74.47,10.15,-0.61,0.07,2.84,1.08,0,">1 nonsynonymous","V11L A33V D59K L183F",4
"lib1","SARS-CoV-2","GAACAGATGCGCATTA",4,55.68,9.18,-1.59,0.21,1.6,1.12,0.02,">1 nonsynonymous","G83H G86S",2
"lib1","SARS-CoV-2","GAACAGATTATGGTAC",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N P82H E141P N157Y",4
"lib1","SARS-CoV-2","GAACAGCAAGCTAATT",1,10.06,10.8,0.03,0.09,3,1,0,">1 nonsynonymous","Y35L C49L",2
"lib1","SARS-CoV-2","GAACAGCATTTCCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7L A89Q K114F F126* S147P C158I",6
"lib1","SARS-CoV-2","GAACAGCCAAATACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","GAACAGCCAATAAAAG",3,73.02,10.49,-0.28,0.07,2.87,1,0,">1 nonsynonymous","A33T D59M",2
"lib1","SARS-CoV-2","GAACAGCCGCCAAACT",1,27.33,10.42,-0.34,0.08,2.91,1,0,"1 nonsynonymous","Y35G",1
"lib1","SARS-CoV-2","GAACAGGACGCTGCCC",1,8.83,9.62,-1.15,0.27,2.76,1.12,0.01,">1 nonsynonymous","S53T Y159F",2
"lib1","SARS-CoV-2","GAACAGGCGAGCTGGA",1,7.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61S T85A C102W N157F T201D",5
"lib1","SARS-CoV-2","GAACAGGCGAGTATAA",14,1.51,NA,NA,NA,NA,NA,NA,"stop","S41H D98H I104* D137Q P149L T201L",6
"lib1","SARS-CoV-2","GAACAGGCTCGTTTTG",2,4.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAACAGGCTGAGAGAG",2,7.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89D K94D G117R K128S G174N A190D",6
"lib1","SARS-CoV-2","GAACAGGTTTCCCAAA",4,51.34,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S113G R124I N157V",3
"lib1","SARS-CoV-2","GAACAGTAAATAAGCA",1,27.96,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T3E T46I E135T I142N Q176R",5
"lib1","SARS-CoV-2","GAACAGTATGAATGCC",3,12.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88G K114T P149Y",3
"lib1","SARS-CoV-2","GAACAGTGACCGTAAA",1,14.33,6.77,-3.99,0.29,1.5,1.08,0.03,">1 nonsynonymous","K132G V153L N157V",3
"lib1","SARS-CoV-2","GAACATAAAAGGGTGG",1,13.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15L C150F",2
"lib1","SARS-CoV-2","GAACATAAACAATTTT",2,5.98,6.39,-4.37,0.34,3,1.17,0.02,">1 nonsynonymous","N4G F134T G146K",3
"lib1","SARS-CoV-2","GAACATAAACACATAT",12,213.54,6.17,-4.6,0.75,1.5,1.18,0.02,">1 nonsynonymous","G146L G166C",2
"lib1","SARS-CoV-2","GAACATAAAGTGTACT",1,13.92,10.75,-0.01,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACATAACATTCTAA",2,43.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","GAACATAACGAATCTA",10,0.98,NA,NA,NA,NA,NA,NA,"stop","Y178T K199*",2
"lib1","SARS-CoV-2","GAACATAACGCATAAT",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53L P82W",2
"lib1","SARS-CoV-2","GAACATAAGCAAATCT",6,82.78,9.62,-1.14,0.12,2.5,1.08,0.01,">1 nonsynonymous","A14N D59G K87H N107C",4
"lib1","SARS-CoV-2","GAACATAATGGCAGGC",6,125.29,9.49,-1.27,0.1,1.95,1.08,0,">1 nonsynonymous","F17L V32S Y39W",3
"lib1","SARS-CoV-2","GAACATACAAACAGCA",12,111.76,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T46Y G101E I142V V173R",4
"lib1","SARS-CoV-2","GAACATACCACCGGTA",4,108.66,10.39,-0.37,0.04,2.86,1.02,0,"1 nonsynonymous","N13D",1
"lib1","SARS-CoV-2","GAACATACCACTTATT",10,100.04,6,-4.76,0.97,1.5,1.11,0,">1 nonsynonymous","D68G Y123L S139V",3
"lib1","SARS-CoV-2","GAACATACGTACTGCC",2,117.22,10.87,0.11,0.07,2.92,1.03,0,"1 nonsynonymous","H189N",1
"lib1","SARS-CoV-2","GAACATACTAACTTGC",5,31.73,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9R N92L",2
"lib1","SARS-CoV-2","GAACATAGAAAATTCT",7,216.25,10.7,-0.06,0.05,2.88,1.05,0,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","GAACATAGACCTACAT",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W T46L",2
"lib1","SARS-CoV-2","GAACATAGAGTTGCCG",8,0.56,NA,NA,NA,NA,NA,NA,"stop","G83* D97I W106S T201M",4
"lib1","SARS-CoV-2","GAACATAGCTGAACAT",1,49.99,10.07,-0.7,0.05,2.94,1,0,">1 nonsynonymous","C6Q N24T",2
"lib1","SARS-CoV-2","GAACATAGTTGTAAAC",2,30.04,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V20S Q168M Q176R A190S",4
"lib1","SARS-CoV-2","GAACATATTAGCAGAC",1,12.73,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T3F C158W",2
"lib1","SARS-CoV-2","GAACATCAACTTTACC",6,98.1,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2A V65I P177K",3
"lib1","SARS-CoV-2","GAACATCAGGCCAACA",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S F70T Y119W",3
"lib1","SARS-CoV-2","GAACATCATGACCTAG",8,66.16,10.74,-0.02,0.07,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACATCCAAACAAAA",7,127.21,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5S Y119L R127F I138P",4
"lib1","SARS-CoV-2","GAACATCCGGTCATAC",4,44.16,8.07,-2.7,0.31,1.5,1.03,0.03,">1 nonsynonymous","E10K F12L T55R C102V",4
"lib1","SARS-CoV-2","GAACATCTAGACAGGA",8,0.33,NA,NA,NA,NA,NA,NA,"stop","Y35N S43T C49* D98Y N120L F126V",6
"lib1","SARS-CoV-2","GAACATCTATTGGCCG",4,43.9,9.53,-1.24,0.16,2,1.12,0.01,">1 nonsynonymous","A42F L60D F134E",3
"lib1","SARS-CoV-2","GAACATCTGATTAAAG",14,84.62,6,-4.76,1.54,1.5,1.16,0,">1 nonsynonymous","T55P L95D C150V",3
"lib1","SARS-CoV-2","GAACATCTTGAAACTA",3,63.9,8.92,-1.84,0.07,2.81,1.17,0,">1 nonsynonymous","Q168L A190C",2
"lib1","SARS-CoV-2","GAACATGAAACAGTGC",5,172.79,10.26,-0.5,0.04,2.75,1.01,0,">1 nonsynonymous","T3A S36P",2
"lib1","SARS-CoV-2","GAACATGAACACTCAA",4,29.93,6,-4.76,0.98,3,1.18,0,">1 nonsynonymous","P7L Y93A Y121E T201M",4
"lib1","SARS-CoV-2","GAACATGAATCGCTTA",1,68.61,10.28,-0.49,0.06,2.73,1.05,0,">1 nonsynonymous","L5K A42Y L60S G116E K199L",5
"lib1","SARS-CoV-2","GAACATGACGCTATCG",2,27.01,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S69G G101Q N118P",3
"lib1","SARS-CoV-2","GAACATGAGCCCGTTT",10,2.22,NA,NA,NA,NA,NA,NA,"stop","N64T I88* S200F",3
"lib1","SARS-CoV-2","GAACATGATCTTTACA",1,19.17,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14V Y50P G83V",3
"lib1","SARS-CoV-2","GAACATGCAAATTACG",3,10.35,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","P82H C102Q L122F",3
"lib1","SARS-CoV-2","GAACATGGTATACACA",1,31.57,10.28,-0.48,0.05,2.91,1.01,0,">1 nonsynonymous","G116S T148W",2
"lib1","SARS-CoV-2","GAACATGGTCAACCCT",4,67.45,10.78,0.01,0.07,2.91,1.07,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GAACATGTAATAATAT",4,7.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10R L38P N58P R73W",4
"lib1","SARS-CoV-2","GAACATGTCAGGACCT",5,77.85,10.76,-0.01,0.04,2.96,1.02,0,">1 nonsynonymous","N40R T55S",2
"lib1","SARS-CoV-2","GAACATGTGCACCAAT",2,24.08,10.75,-0.02,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACATGTTCATAATA",5,28.26,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19K K26P",2
"lib1","SARS-CoV-2","GAACATTAAAGCTCAA",11,155.3,7.98,-2.79,0.15,1.57,1.13,0.01,">1 nonsynonymous","D34H F62I F167Y G174S",4
"lib1","SARS-CoV-2","GAACATTATTCTAATT",3,60.27,6.24,-4.52,0.36,1.5,1.1,0,">1 nonsynonymous","F8A C61H P82D F126E T148I A192L",6
"lib1","SARS-CoV-2","GAACATTCACCCACAA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","I72R T85D V103* G117N Y143I L187Q",6
"lib1","SARS-CoV-2","GAACATTCCAATACCG",3,74.91,10.51,-0.25,0.08,2.78,1.08,0,"1 nonsynonymous","E141P",1
"lib1","SARS-CoV-2","GAACATTCCCGACTCA",11,42.15,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","G101N",1
"lib1","SARS-CoV-2","GAACATTCCTCGTAAA",1,10.77,10.57,-0.2,0.12,2.94,1,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","GAACATTCTATGGGGG",9,73.36,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N1V N58H Q79A S129C F160A P177Q",6
"lib1","SARS-CoV-2","GAACATTCTGACTAGG",2,34.03,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I28L S45F F70I G83I D98N I142R N151I",7
"lib1","SARS-CoV-2","GAACATTGTACTACTG",9,18.54,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A33D V103L",2
"lib1","SARS-CoV-2","GAACATTTATCATATA",4,20.56,6.78,-3.99,0.15,2.37,1.06,0,">1 nonsynonymous","C6A C49V L131V",3
"lib1","SARS-CoV-2","GAACATTTATGAACGT",5,90.36,10.4,-0.36,0.03,2.92,1.04,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","GAACATTTCACAAAGA",6,74.8,7.02,-3.75,0.26,1.5,1.13,0.01,">1 nonsynonymous","D90Y D98G N118P G166Q H189R",5
"lib1","SARS-CoV-2","GAACATTTTATCACCC",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119R L131K",2
"lib1","SARS-CoV-2","GAACATTTTTCATGCT",5,11.27,8.63,-2.13,0.31,1.57,1.38,0.04,">1 nonsynonymous","Y91T T201I",2
"lib1","SARS-CoV-2","GAACCAAAAAAGGCTC",12,121.73,10.29,-0.48,0.06,2.93,1,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","GAACCAAAACACGTTT",22,271.57,10.7,-0.07,0.04,2.92,1.06,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","GAACCAAAAGTTGCTT",8,84.28,6.59,-4.17,0.52,1.5,1.24,0.03,">1 nonsynonymous","R27G P82T L122V S129M S164N",5
"lib1","SARS-CoV-2","GAACCAAACAAAGGCA",2,42.85,8.21,-2.55,0.22,1.56,1.14,0.02,">1 nonsynonymous","N1L A18V Y35I G117R",4
"lib1","SARS-CoV-2","GAACCAAACCATAACA",6,78.25,10.74,-0.02,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACCAAATAACAGCC",11,17.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13F P96E S113M P133L T140S",5
"lib1","SARS-CoV-2","GAACCAAATCACTCGG",3,49.13,10.72,-0.05,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACCAACAACTATGA",2,23.19,10.29,-0.48,0.08,2.92,1.09,0,">1 nonsynonymous","V37M N118A",2
"lib1","SARS-CoV-2","GAACCAACACATTTGT",2,20.27,10.67,-0.09,0.06,2.88,1.09,0,">1 nonsynonymous","L5Y G152D",2
"lib1","SARS-CoV-2","GAACCAACATCAAGAG",3,21.39,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","N4T W23L I88L E141G Y165C",5
"lib1","SARS-CoV-2","GAACCAACCAGCCAAT",3,27.75,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","V65M W106R N151M P169F P177Y T201S",6
"lib1","SARS-CoV-2","GAACCAACCGAACCGA",7,42.09,7.09,-3.67,0.22,1.5,1.18,0.01,">1 nonsynonymous","K87S D112T",2
"lib1","SARS-CoV-2","GAACCAACCTGTTACG",6,68.82,10.79,0.03,0.05,2.89,1.08,0,">1 nonsynonymous","L5P V153Y L188R",3
"lib1","SARS-CoV-2","GAACCAACGAAGTTTT",6,0.63,NA,NA,NA,NA,NA,NA,"stop","V11N K87N G116*",3
"lib1","SARS-CoV-2","GAACCAACTCTGCCAG",2,13.9,10.98,0.21,0.15,2.93,1.02,0.01,"1 nonsynonymous","S129N",1
"lib1","SARS-CoV-2","GAACCAAGAAGTTCCA",10,64.26,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T55W K94L Y119P T148F",4
"lib1","SARS-CoV-2","GAACCAATAAAAGCCG",3,8.71,6.5,-4.27,0.81,1.5,1.02,0.08,">1 nonsynonymous","C6D L131S",2
"lib1","SARS-CoV-2","GAACCAATACAGCTAT",4,301.43,10.29,-0.48,0.04,2.86,1.03,0,">1 nonsynonymous","Y91S Q168F",2
"lib1","SARS-CoV-2","GAACCAATCCCCTCGT",2,38.29,10.62,-0.14,0.1,2.86,1.06,0,"1 nonsynonymous","K48T",1
"lib1","SARS-CoV-2","GAACCAATGGAAAATA",1,11.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6Y T46A R136E G166S",4
"lib1","SARS-CoV-2","GAACCACAAAAATACA",3,51.56,10.76,0,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACCACAACAGTAGT",7,21.9,10.85,0.09,0.12,2.96,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAACCACAAGATTCGA",3,18.9,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","A81P F134P",2
"lib1","SARS-CoV-2","GAACCACATTCTTGCC",1,48.18,10.68,-0.08,0.05,2.88,1.06,0,"1 nonsynonymous","R136K",1
"lib1","SARS-CoV-2","GAACCACCAGAACTGA",2,45.8,7.06,-3.71,0.35,1.5,1.1,0.03,">1 nonsynonymous","Y119H G146L T201H",3
"lib1","SARS-CoV-2","GAACCACCCTAGTAAA",8,1.24,NA,NA,NA,NA,NA,NA,"stop","F62P K87L E141F G174*",4
"lib1","SARS-CoV-2","GAACCACCTAAGAGGA",1,26.98,10.76,0,0.08,2.94,1.02,0,"1 nonsynonymous","L5M",1
"lib1","SARS-CoV-2","GAACCACGCTTCTAAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","G83D F134*",2
"lib1","SARS-CoV-2","GAACCACGGCTGATAG",1,24.64,8.59,-2.17,0.15,2.61,1.12,0.01,">1 nonsynonymous","D98C S129R Y143L E154L P197K",5
"lib1","SARS-CoV-2","GAACCACGTACAAGTG",9,41.41,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A14V P96I F134R G174N T201L",5
"lib1","SARS-CoV-2","GAACCACGTACGTAAT",10,18.7,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","S19Q I28D",2
"lib1","SARS-CoV-2","GAACCACGTCAAAGCA",3,578.53,10.7,-0.06,0.05,2.91,1.05,0,"1 nonsynonymous","Y91F",1
"lib1","SARS-CoV-2","GAACCACTTTATTAAC",1,12.14,10.63,-0.13,0.1,2.92,1.03,0,"1 nonsynonymous","S45G",1
"lib1","SARS-CoV-2","GAACCAGAAGGAACTG",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L A105V N171H",3
"lib1","SARS-CoV-2","GAACCAGACATACAAA",1,11.36,10.27,-0.5,0.25,1.75,1.06,0.02,">1 nonsynonymous","L60A A81M E141Y",3
"lib1","SARS-CoV-2","GAACCAGAGAACCGTT",4,28.86,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L95T C158V R179S",3
"lib1","SARS-CoV-2","GAACCAGTAAATGTTT",3,14.91,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F44P L57D P161K",3
"lib1","SARS-CoV-2","GAACCAGTCAAATAAC",1,15.99,9.84,-0.92,0.12,2.69,1.12,0.01,">1 nonsynonymous","P54T C61Y Q84Y L122K N151S",5
"lib1","SARS-CoV-2","GAACCAGTTAACTTCT",8,2.59,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","GAACCATACCGAAACG",4,63.25,10.85,0.08,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACCATCGATCAGCC",4,0.37,NA,NA,NA,NA,NA,NA,"stop","R27W Y39*",2
"lib1","SARS-CoV-2","GAACCATGGGAAAATC",2,0.08,NA,NA,NA,NA,NA,NA,"stop","C6T K94* G152P P197I",4
"lib1","SARS-CoV-2","GAACCATGTTTCAGCT",1,46.34,9.53,-1.23,0.17,1.91,1.08,0.01,">1 nonsynonymous","V11W A18G E141C",3
"lib1","SARS-CoV-2","GAACCATGTTTCGCCT",8,131.04,10.56,-0.2,0.05,2.94,1,0,"1 nonsynonymous","A81W",1
"lib1","SARS-CoV-2","GAACCATTAAAACATT",8,22.37,6,-4.76,2,3,1.17,0,">1 nonsynonymous","R27Q D68L L183K",3
"lib1","SARS-CoV-2","GAACCATTACAAGGCA",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V G51A L95A P169M",4
"lib1","SARS-CoV-2","GAACCATTACGCCTAG",4,29.09,7.29,-3.48,0.62,1.5,1.13,0.07,">1 nonsynonymous","A14V V65F G101P A190L",4
"lib1","SARS-CoV-2","GAACCATTACTGTCAA",1,18.73,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S36V S41T D90G F99L Y143S",5
"lib1","SARS-CoV-2","GAACCATTCTAGAAAT",7,29.64,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P7V A18T F47N D68F",4
"lib1","SARS-CoV-2","GAACCATTTGTATCCA",2,25.5,10.69,-0.08,0.04,2.92,1.05,0,">1 nonsynonymous","T100I N120I K198N",3
"lib1","SARS-CoV-2","GAACCCAAGGGCTTTC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","E10I F17* T55F R136V",4
"lib1","SARS-CoV-2","GAACCCACAGAGTTCA",4,24.07,10.09,-0.67,0.05,2.89,1.03,0,"1 nonsynonymous","E154V",1
"lib1","SARS-CoV-2","GAACCCAGAACTACTT",1,29.46,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","Y50H F70S V77Q R179L",4
"lib1","SARS-CoV-2","GAACCCAGACCTAGAT",9,525.69,7.69,-3.07,0.26,1.5,1.07,0.02,">1 nonsynonymous","G9L G86D",2
"lib1","SARS-CoV-2","GAACCCAGCCCATAAT",1,23.7,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S43Y C61W A89F D97T D137K",5
"lib1","SARS-CoV-2","GAACCCATATCTCTTA",2,26.95,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","F44A Y50I S184M",3
"lib1","SARS-CoV-2","GAACCCATGACAATAC",1,90.72,8.99,-1.77,0.08,2.81,1.11,0,">1 nonsynonymous","N64T F156D",2
"lib1","SARS-CoV-2","GAACCCATGAGTTGTA",1,6.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S200M",1
"lib1","SARS-CoV-2","GAACCCATGTGTTTGT",10,98.5,10.53,-0.23,0.08,2.75,1.2,0,">1 nonsynonymous","V37N A42G K128F K198M",4
"lib1","SARS-CoV-2","GAACCCCAAAATAAGC",13,124.01,10.07,-0.7,0.04,2.68,1.07,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","GAACCCCACGTAACAA",4,76.78,6,-4.76,1.34,1.5,1.16,0.01,">1 nonsynonymous","F8L L38V K56R S129C P161Q",5
"lib1","SARS-CoV-2","GAACCCCAGTTCGACG",4,61.35,9.29,-1.48,0.21,1.76,1.15,0.02,"1 nonsynonymous","F185K",1
"lib1","SARS-CoV-2","GAACCCCATCTAGCCT",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91D A105E K132T",3
"lib1","SARS-CoV-2","GAACCCCCGTAAACGT",9,54.6,7.26,-3.5,0.16,1.95,1.15,0.01,">1 nonsynonymous","F8T F156C",2
"lib1","SARS-CoV-2","GAACCCCCGTTTACCT",3,76.77,6.54,-4.22,0.3,1.5,1.16,0.01,">1 nonsynonymous","N13L F44I Y175A",3
"lib1","SARS-CoV-2","GAACCCCCTAAGTGCA",5,111.06,8.8,-1.96,0.12,2.3,1.17,0,">1 nonsynonymous","T3Y C61N K132V A145C",4
"lib1","SARS-CoV-2","GAACCCCGACCTTTAT",1,12.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y S69P D97V",3
"lib1","SARS-CoV-2","GAACCCGACTTCCAAG",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A F99L C102S",3
"lib1","SARS-CoV-2","GAACCCGCAACACTCG",8,99.44,10.42,-0.34,0.05,2.87,1.04,0,">1 nonsynonymous","C61H L183F",2
"lib1","SARS-CoV-2","GAACCCGCATTCATTT",13,6.81,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N30L G101L",2
"lib1","SARS-CoV-2","GAACCCGCCATAGAGA",7,37.61,6.03,-4.74,0.94,1.5,1.21,0.01,">1 nonsynonymous","L5G P82D G86W",3
"lib1","SARS-CoV-2","GAACCCGCGCGCAAAC",3,22.34,10.54,-0.22,0.14,2.63,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAACCCGTTCTAAATA",18,131.75,8.16,-2.6,0.23,1.5,1.07,0.02,">1 nonsynonymous","T3Y W23R F62W Y143F",4
"lib1","SARS-CoV-2","GAACCCTCAAAACAAT",5,20.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G D137L",2
"lib1","SARS-CoV-2","GAACCCTGCGAACTGG",13,1.23,NA,NA,NA,NA,NA,NA,"stop","T100W A105V V182H T201*",4
"lib1","SARS-CoV-2","GAACCGAAACTGCAAA",8,139.86,9.23,-1.53,0.11,2.37,1.13,0,">1 nonsynonymous","F44N K56G L122T F134Q",4
"lib1","SARS-CoV-2","GAACCGAAATCCCACA",3,15.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98R R127E F185Y",3
"lib1","SARS-CoV-2","GAACCGAAATTAAATA",2,25.82,10.71,-0.05,0.1,2.73,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACCGAATCTCTCTA",4,78.2,6.06,-4.71,0.49,1.5,1.13,0,">1 nonsynonymous","Q144V P177W",2
"lib1","SARS-CoV-2","GAACCGAGATTGCTCT",5,61.6,10.17,-0.6,0.08,2.65,1.05,0,">1 nonsynonymous","A42F Y178L",2
"lib1","SARS-CoV-2","GAACCGCATAAAAGCG",12,46.97,6.3,-4.47,0.61,1.5,1.22,0.02,">1 nonsynonymous","N1R P82D G86W K94F",4
"lib1","SARS-CoV-2","GAACCGCATAATAACT",4,8.08,8.89,-1.88,0.21,2.26,1.05,0.03,">1 nonsynonymous","A33D D98I S129T",3
"lib1","SARS-CoV-2","GAACCGCCAGATGAAC",3,23.02,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Y21K L95G Q168Y",3
"lib1","SARS-CoV-2","GAACCGCCCTCATCGT",1,11.3,6.28,-4.48,0.83,1.5,1.14,0.04,"1 nonsynonymous","G101C",1
"lib1","SARS-CoV-2","GAACCGCCTATGGCAA",1,42.37,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V71A D97S Y159I",3
"lib1","SARS-CoV-2","GAACCGCGAGGCGTCT",1,8.6,10.55,-0.22,0.08,2.94,1.02,0,">1 nonsynonymous","L60T Y91F",2
"lib1","SARS-CoV-2","GAACCGCGCAATGATT",8,6.76,NA,NA,NA,NA,NA,NA,"stop","Y35L V77G P149E P169G V173* T201R",6
"lib1","SARS-CoV-2","GAACCGCGGAAAGCCA",4,11.11,6.01,-4.76,0.64,1.5,1.06,0.01,">1 nonsynonymous","F8K V20T A67L G116L I138L T148F Q168R",7
"lib1","SARS-CoV-2","GAACCGGATTTCAAAA",11,2.94,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","GAACCGGGATGCACCA",1,0.66,NA,NA,NA,NA,NA,NA,"stop","A14* V37M",2
"lib1","SARS-CoV-2","GAACCGGTTAACTGCG",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C T140R",2
"lib1","SARS-CoV-2","GAACCGTAACCTCCTT",3,105.38,9.58,-1.19,0.07,2.85,1.07,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","GAACCGTAAGGCAATC",3,65.05,9.42,-1.34,0.09,2.12,1.09,0,">1 nonsynonymous","D59V G155L T201Q",3
"lib1","SARS-CoV-2","GAACCGTACTTAGTTA",1,55.61,6,-4.76,2,3,1.15,0,">1 nonsynonymous","P7F K26S T46S N64L S113Q R124A Q176S",7
"lib1","SARS-CoV-2","GAACCGTCTTCTACGG",12,90.95,10.1,-0.67,0.11,2.43,1,0,">1 nonsynonymous","N13A S45D D90N S129I",4
"lib1","SARS-CoV-2","GAACCGTGCGAATCTG",5,61.48,10.53,-0.23,0.06,2.93,1.03,0,">1 nonsynonymous","L5P S19H",2
"lib1","SARS-CoV-2","GAACCGTTTGTAAAGT",2,8.98,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N40T Y50S P96L V103A R179W",5
"lib1","SARS-CoV-2","GAACCTAAGAAATCCG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K Y39V C49L L60H",4
"lib1","SARS-CoV-2","GAACCTAAGTATGTAA",1,7.86,7.76,-3.01,0.4,1.5,1.09,0.07,">1 nonsynonymous","T15S L38S A81T",3
"lib1","SARS-CoV-2","GAACCTAATAGTTTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","I104* L183E S200P",3
"lib1","SARS-CoV-2","GAACCTAATCCAGACA",4,60.31,6.21,-4.55,0.57,1.9,1.26,0.02,">1 nonsynonymous","Y91T E135L G146L",3
"lib1","SARS-CoV-2","GAACCTACCATACATA",1,6.02,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","K26M C61S F62E N107Y",4
"lib1","SARS-CoV-2","GAACCTAGATGAGTAA",2,19.19,10.62,-0.14,0.12,2.9,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAACCTAGGCCCTAGT",2,20.93,10.42,-0.35,0.06,2.9,1.06,0,">1 nonsynonymous","T170S T201R",2
"lib1","SARS-CoV-2","GAACCTAGGTAAAGGA",3,23.9,10.15,-0.62,0.07,2.91,1.09,0,">1 nonsynonymous","L122A Y178L",2
"lib1","SARS-CoV-2","GAACCTAGTCTAGACA",10,155.14,10.21,-0.56,0.08,2.57,1.02,0,">1 nonsynonymous","S45T A67T",2
"lib1","SARS-CoV-2","GAACCTATCACGACAG",5,107.09,10.6,-0.16,0.05,2.85,1.06,0,">1 nonsynonymous","S45M Y123F",2
"lib1","SARS-CoV-2","GAACCTATCTCGACGG",1,1.93,NA,NA,NA,NA,NA,NA,"stop","W23Y Q168*",2
"lib1","SARS-CoV-2","GAACCTATTCTGGAGT",2,30.9,10.24,-0.52,0.1,2.69,1,0,">1 nonsynonymous","F44S L95I P149H",3
"lib1","SARS-CoV-2","GAACCTATTCTGTGTG",3,54.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H A42T G166W P177Q",4
"lib1","SARS-CoV-2","GAACCTATTGGACGAG",6,44.04,6,-4.76,0.57,3,1.12,0,">1 nonsynonymous","N64S F99G W106E A145L Y175D",5
"lib1","SARS-CoV-2","GAACCTCAAAAACTAA",2,0.84,NA,NA,NA,NA,NA,NA,"stop","L60I V103F V173*",3
"lib1","SARS-CoV-2","GAACCTCATAATTTTA",8,56.79,6,-4.76,0.94,1.5,1.2,0.01,">1 nonsynonymous","C6H V37T G86T D137R N151D",5
"lib1","SARS-CoV-2","GAACCTCCATATGAGG",9,118.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10C R25W",2
"lib1","SARS-CoV-2","GAACCTCCCTGAATTG",2,132.32,8.44,-2.33,0.19,1.77,1.13,0.01,">1 nonsynonymous","Y119K Q176R",2
"lib1","SARS-CoV-2","GAACCTCGCGCTTCAG",1,2.37,NA,NA,NA,NA,NA,NA,"stop","G9V T55L N92Y Q144* V180F",5
"lib1","SARS-CoV-2","GAACCTCTACACGTGG",8,48.43,9.68,-1.09,0.23,1.5,1.04,0.03,">1 nonsynonymous","N64M W106V E141G",3
"lib1","SARS-CoV-2","GAACCTCTACCGATTA",3,24.74,10.35,-0.42,0.07,2.83,1,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","GAACCTCTTTGCTTAC",1,17.81,6.06,-4.7,1.26,1.5,1.24,0.03,">1 nonsynonymous","L125D C150Y",2
"lib1","SARS-CoV-2","GAACCTGACAAGATGG",3,10.93,10.7,-0.07,0.18,2.7,1.09,0.01,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","GAACCTGCCCGAACCA",1,7.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114R Q144R Y165L",3
"lib1","SARS-CoV-2","GAACCTGGAGCACAAA",5,34.61,10.1,-0.66,0.08,2.73,1.01,0,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","GAACCTGGCGAGCACC",5,149.58,10.47,-0.29,0.03,2.82,1.03,0,">1 nonsynonymous","A33L T100S N109R",3
"lib1","SARS-CoV-2","GAACCTGGTGGAATTT",2,51.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9L A105R Y165A Y175C K199W",5
"lib1","SARS-CoV-2","GAACCTGTCAACATAA",5,62.94,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L E76N N107V I142H",4
"lib1","SARS-CoV-2","GAACCTGTTAGGGCGC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","T3K S41N P54F L60I C102* L122T G172L",7
"lib1","SARS-CoV-2","GAACCTTCATACATAG",1,13.67,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34G L95D",2
"lib1","SARS-CoV-2","GAACCTTGACTTATCT",4,13.04,10.76,0,0.04,2.92,1.02,0,">1 nonsynonymous","V37R F62T G152S",3
"lib1","SARS-CoV-2","GAACCTTGCATAAGAT",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y Q176E L183R",3
"lib1","SARS-CoV-2","GAACGAAAATGTAATG",5,111.22,10.49,-0.27,0.05,2.96,1.01,0,">1 nonsynonymous","V37R K87I",2
"lib1","SARS-CoV-2","GAACGAAACATATAAA",2,32.53,8.93,-1.83,0.16,1.51,1.16,0.01,">1 nonsynonymous","N40H Y165R",2
"lib1","SARS-CoV-2","GAACGAAAGACTCCAT",15,82.34,6.17,-4.6,0.74,1.5,1.16,0.02,">1 nonsynonymous","D90P T201G",2
"lib1","SARS-CoV-2","GAACGAAAGTACCCGT",2,44.45,8.3,-2.46,0.2,1.69,1.14,0.01,">1 nonsynonymous","Y119M N157Q",2
"lib1","SARS-CoV-2","GAACGAACACCCATAA",4,29.72,10.06,-0.7,0.26,1.73,1.09,0.02,">1 nonsynonymous","Y35P D59T Q79K",3
"lib1","SARS-CoV-2","GAACGAAGAAACACTC",1,54.06,10.73,-0.04,0.07,2.86,1.08,0,"1 nonsynonymous","P169R",1
"lib1","SARS-CoV-2","GAACGAAGTTTCGAAC",1,12.27,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","GAACGAATACCGTAAC",4,70.27,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G86V D97K",2
"lib1","SARS-CoV-2","GAACGAATCAGCTACA",3,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I P96Q S139N",3
"lib1","SARS-CoV-2","GAACGAATCTATCAAT",11,226.73,10.56,-0.21,0.03,2.85,1.03,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","GAACGAATGTCATGGG",3,28.26,7.31,-3.46,0.37,1.5,1.23,0.03,">1 nonsynonymous","D98T L131S",2
"lib1","SARS-CoV-2","GAACGAATTAACTACC",1,16.63,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","K87N L95K Y119Q",3
"lib1","SARS-CoV-2","GAACGACACAGTATTC",3,25.24,10.85,0.09,0.12,2.85,1.08,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","GAACGACAGTAATCGA",5,43.98,9.95,-0.81,0.06,2.83,1.02,0,"1 nonsynonymous","P161G",1
"lib1","SARS-CoV-2","GAACGACCAACAAACA",4,60.22,10.81,0.04,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACGACCAACGAACA",4,3.11,NA,NA,NA,NA,NA,NA,"stop","V103S K132* F167L",3
"lib1","SARS-CoV-2","GAACGACCTCAGGCAC",8,91.71,9.2,-1.56,0.09,1.75,1.1,0,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","GAACGACGAGAGTACT",1,8.06,7.01,-3.76,0.19,2.09,1.04,0,">1 nonsynonymous","S41V I80L F99E",3
"lib1","SARS-CoV-2","GAACGACGTCTGTATC",2,6.7,9.96,-0.8,0.25,2.3,1.02,0.01,">1 nonsynonymous","A14V S139H",2
"lib1","SARS-CoV-2","GAACGACTACAGAAAT",2,22.7,10.26,-0.5,0.13,2.5,1.03,0.01,">1 nonsynonymous","L60I E135C",2
"lib1","SARS-CoV-2","GAACGACTATCAAGAA",2,5.67,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","A42T G101D N118A G152I V180M",5
"lib1","SARS-CoV-2","GAACGACTCATATTAG",1,21.38,6.03,-4.74,0.6,1.5,1.15,0.01,">1 nonsynonymous","F12N S45W S200A",3
"lib1","SARS-CoV-2","GAACGACTGAAAATAA",2,22.2,10.79,0.03,0.09,2.86,1.07,0,">1 nonsynonymous","I2Q K114S",2
"lib1","SARS-CoV-2","GAACGACTTGAATCAT",8,66.73,10.71,-0.05,0.06,2.9,1.05,0,">1 nonsynonymous","V37Y I138L N151S",3
"lib1","SARS-CoV-2","GAACGACTTTAATTAG",4,16.62,9.67,-1.09,0.12,1.87,1.1,0.01,">1 nonsynonymous","F44S D98L K198E",3
"lib1","SARS-CoV-2","GAACGAGACATAGAAG",1,52.9,8.76,-2,0.17,1.5,1.1,0.02,">1 nonsynonymous","Y35F N92A E141M Q163R",4
"lib1","SARS-CoV-2","GAACGAGCTTAACGAG",3,43.41,10.71,-0.06,0.04,2.89,1.07,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","GAACGAGGGGGAACAG",1,1.05,NA,NA,NA,NA,NA,NA,"stop","L5N L60T G116L L162*",4
"lib1","SARS-CoV-2","GAACGAGGTTATTTTG",5,125.28,10.26,-0.51,0.03,2.82,1.05,0,">1 nonsynonymous","K128C P149T",2
"lib1","SARS-CoV-2","GAACGAGTTAAATTAA",6,1.41,NA,NA,NA,NA,NA,NA,"stop","G9* K26S",2
"lib1","SARS-CoV-2","GAACGAGTTATCAAAC",1,8.78,8.68,-2.09,0.11,1.92,1.11,0.01,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","GAACGATACGAATATT",1,13.51,10.47,-0.29,0.08,2.92,1,0,">1 nonsynonymous","V37Y P54G I138L",3
"lib1","SARS-CoV-2","GAACGATATTAATCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59H S129* F156E L183S",4
"lib1","SARS-CoV-2","GAACGATATTCATGAC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","I2G A33* G51C A81R C158R",5
"lib1","SARS-CoV-2","GAACGATCAATAAAGG",3,30.79,8.24,-2.52,0.45,1.5,1,0.08,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","GAACGATCAGACTGGA",1,52.68,6.14,-4.62,0.75,1.5,1.21,0.02,">1 nonsynonymous","C61R D112V Q176N",3
"lib1","SARS-CoV-2","GAACGATGATGACAAA",12,1.78,NA,NA,NA,NA,NA,NA,"stop","F12* D90L Q168D",3
"lib1","SARS-CoV-2","GAACGATGCAATTTTA",1,11,9.99,-0.77,0.28,2.43,1.03,0.02,">1 nonsynonymous","N4P G9R T63M N151Q Q168S",5
"lib1","SARS-CoV-2","GAACGATGCCAAATCC",2,24.44,6.48,-4.29,0.68,1.5,1.18,0.03,">1 nonsynonymous","R16M I28S E135S E141L",4
"lib1","SARS-CoV-2","GAACGATGCGGGTTGT",3,51.39,10.18,-0.59,0.05,2.94,1,0,">1 nonsynonymous","R27Y C61K A89C",3
"lib1","SARS-CoV-2","GAACGATGTGCCATTT",2,30.82,7.41,-3.36,0.26,1.53,1.09,0.02,">1 nonsynonymous","A22C R127S Q168L",3
"lib1","SARS-CoV-2","GAACGATTAACTCTAC",4,50.64,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P82Q N120E R127P K199A",4
"lib1","SARS-CoV-2","GAACGATTCGTCAGAA",13,163.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23H S53F L60T F156V",4
"lib1","SARS-CoV-2","GAACGATTTAATTTTC",8,74.06,10.68,-0.09,0.07,2.86,1.02,0,"1 nonsynonymous","S184M",1
"lib1","SARS-CoV-2","GAACGATTTCTAAATA",5,2.68,NA,NA,NA,NA,NA,NA,"stop","A14S Y50K K56V V77* E141L E186G",6
"lib1","SARS-CoV-2","GAACGCAACAATGCAC",2,52.56,9.66,-1.11,0.13,1.91,1.1,0.01,"1 nonsynonymous","F12Q",1
"lib1","SARS-CoV-2","GAACGCAACCCCCTGA",5,113.31,10.79,0.03,0.06,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAACGCAAGTATAAAA",2,7.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35P D97Y E135V G155L Q168L L183Q",6
"lib1","SARS-CoV-2","GAACGCAGTTAGATGC",4,18.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6L S43N G146L G166T",4
"lib1","SARS-CoV-2","GAACGCATAACTATAA",5,17.91,7.1,-3.66,0.42,1.54,1.26,0.03,">1 nonsynonymous","L5H D90S T100N W106L",4
"lib1","SARS-CoV-2","GAACGCATTAGCGTTT",7,117.91,10.35,-0.41,0.05,2.85,1.05,0,"1 nonsynonymous","Y91C",1
"lib1","SARS-CoV-2","GAACGCATTGAATACA",7,7.06,NA,NA,NA,NA,NA,NA,"stop","N1* P7T Q176L",3
"lib1","SARS-CoV-2","GAACGCCAAGATATAA",1,27.79,10.18,-0.58,0.09,2.8,1.09,0,">1 nonsynonymous","Y123S K128L",2
"lib1","SARS-CoV-2","GAACGCCACACCTAGA",5,68.64,9.83,-0.94,0.05,2.88,1.04,0,">1 nonsynonymous","S41K L60Q T100L L125Q S139T",5
"lib1","SARS-CoV-2","GAACGCCACGTTTTCG",3,1.47,NA,NA,NA,NA,NA,NA,"stop","A18V C31* A42S A89H A105Q T148S Y178L",7
"lib1","SARS-CoV-2","GAACGCCATGCATTCG",1,65.33,9.68,-1.08,0.18,1.74,1.1,0.01,">1 nonsynonymous","C49V I138C T201S",3
"lib1","SARS-CoV-2","GAACGCCGAACGGGGT",8,265.1,9.9,-0.86,0.06,2.43,1.03,0,">1 nonsynonymous","V32Q G51N A105S S139D F160T",5
"lib1","SARS-CoV-2","GAACGCCGTGACGTTC",10,75.23,6,-4.76,1.92,1.5,1.22,0.03,">1 nonsynonymous","L57H D68V K114I",3
"lib1","SARS-CoV-2","GAACGCCGTTAATCCA",3,39.95,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9K A81Q S113G Y165S",4
"lib1","SARS-CoV-2","GAACGCCTCCATGGGG",4,59.19,10.32,-0.45,0.03,2.92,1.02,0,">1 nonsynonymous","N40T C61E I142Y",3
"lib1","SARS-CoV-2","GAACGCGGTCTGAACT",3,17.56,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S129A V180N",2
"lib1","SARS-CoV-2","GAACGCTACACACGAA",10,2.33,NA,NA,NA,NA,NA,NA,"stop","C6* G146V V173F",3
"lib1","SARS-CoV-2","GAACGCTCTTCAATAT",2,9.16,9.99,-0.78,0.05,2.03,1.01,0,"1 nonsynonymous","N13I",1
"lib1","SARS-CoV-2","GAACGCTTACTATTTT",1,12.56,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","A18M G83T G101I",3
"lib1","SARS-CoV-2","GAACGCTTCATCAACC",4,0.32,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib1","SARS-CoV-2","GAACGCTTTAGTATTA",7,25.13,9.37,-1.4,0.12,1.95,1.09,0.01,">1 nonsynonymous","L5S C31Y K48N G83A",4
"lib1","SARS-CoV-2","GAACGCTTTGATATTA",1,13.27,10.24,-0.52,0.15,2.49,1.02,0.01,">1 nonsynonymous","N40I P149S",2
"lib1","SARS-CoV-2","GAACGGACCGGATCAC",5,49.9,6.12,-4.65,1.13,1.5,1.26,0.03,">1 nonsynonymous","F8S R16K R27L S129P P149I",5
"lib1","SARS-CoV-2","GAACGGACGATGCACA",8,1.01,NA,NA,NA,NA,NA,NA,"stop","F160N Y175*",2
"lib1","SARS-CoV-2","GAACGGAGGAAGGATT",7,84.72,10.53,-0.24,0.04,2.93,1,0,">1 nonsynonymous","K87I T201P",2
"lib1","SARS-CoV-2","GAACGGCCATCCACCT",3,17.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8A S29P R127I",3
"lib1","SARS-CoV-2","GAACGGCTCTTGCCAC",1,30.74,6.41,-4.35,0.69,1.5,1.25,0.02,">1 nonsynonymous","G51C A81K E154D Q163K",4
"lib1","SARS-CoV-2","GAACGGGCAACTAAAT",3,21.61,10.75,-0.01,0.11,2.8,1.06,0.01,">1 nonsynonymous","Y35W I138W",2
"lib1","SARS-CoV-2","GAACGGTAATCAATCA",2,1045.53,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D68L I142R T170C",3
"lib1","SARS-CoV-2","GAACGGTAGCTATATG",1,9.97,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","I28L G101S Y143L",3
"lib1","SARS-CoV-2","GAACGGTATGCTCCCA",4,30.56,10.7,-0.07,0.07,2.93,1.06,0,">1 nonsynonymous","S43Y L60I",2
"lib1","SARS-CoV-2","GAACGGTTAACTTCGA",8,68.8,10.76,-0.01,0.07,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACGGTTATGAGAAC",2,23.9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I104K R127Y",2
"lib1","SARS-CoV-2","GAACGTAACAATGCAA",3,8.88,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","G86I N120M",2
"lib1","SARS-CoV-2","GAACGTAAGAACAAAA",7,117.15,10.74,-0.02,0.06,2.86,1.06,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","GAACGTAAGCCTTATA",4,37.21,10.51,-0.25,0.06,2.93,1,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","GAACGTACAGGCCTGA",3,22.84,9.64,-1.13,0.17,1.93,1.09,0.02,">1 nonsynonymous","T15C T100A",2
"lib1","SARS-CoV-2","GAACGTACCAATGAAA",1,65.45,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C31H F134S I142C",3
"lib1","SARS-CoV-2","GAACGTACTTTGGATA",3,17.83,6.63,-4.13,0.63,3,1.18,0.02,">1 nonsynonymous","C102G Y119I L162S",3
"lib1","SARS-CoV-2","GAACGTAGCTTTAGCA",1,21.11,6,-4.76,1.61,2.06,1.21,0.01,">1 nonsynonymous","P96L N157R",2
"lib1","SARS-CoV-2","GAACGTATACTCTTGT",2,11.07,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5D T15K I88K W106F N120L T148L C195Y",7
"lib1","SARS-CoV-2","GAACGTCCCGTCCCCA",6,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L L125C G146L G174K V180Q",5
"lib1","SARS-CoV-2","GAACGTCCGGTCCTCG",1,92.18,9.63,-1.14,0.07,2.78,1.08,0,">1 nonsynonymous","S41L G116A G174D",3
"lib1","SARS-CoV-2","GAACGTCCTTTTGAAC",2,67.68,6.38,-4.38,0.71,1.5,1.17,0.03,">1 nonsynonymous","I2N V20E E141C P161K Q176H",5
"lib1","SARS-CoV-2","GAACGTCTACAAGCAA",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G N40L",2
"lib1","SARS-CoV-2","GAACGTCTAGAAAAAT",4,0.13,NA,NA,NA,NA,NA,NA,"stop","N4H E10Y T46V D59S D90R N118D R127S S184*",8
"lib1","SARS-CoV-2","GAACGTCTCACTTTTA",9,121.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99L Y175T S200T",3
"lib1","SARS-CoV-2","GAACGTCTCTCATCAA",4,23.62,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","D59T N92Q N151Y L187P C195F K199W",6
"lib1","SARS-CoV-2","GAACGTGACCTAAACA",4,50.24,10.01,-0.75,0.09,2.66,1.06,0,">1 nonsynonymous","G51C L187S",2
"lib1","SARS-CoV-2","GAACGTGATCTAGACC",2,45.88,10.08,-0.69,0.12,2.65,1.02,0.01,">1 nonsynonymous","P96N T100N",2
"lib1","SARS-CoV-2","GAACGTGATGAAGCCA",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F D112Y Q144L",3
"lib1","SARS-CoV-2","GAACGTGATTAAAGCA",1,8.26,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","F62A P82Q S139C P197Q",4
"lib1","SARS-CoV-2","GAACGTGATTTTCTCG",5,82,8.63,-2.13,0.11,2.89,1.11,0,">1 nonsynonymous","N64R K87L Y119G F160A",4
"lib1","SARS-CoV-2","GAACGTGCCCCTTGGA",5,18.3,NA,NA,NA,NA,NA,NA,"stop","C49L F99*",2
"lib1","SARS-CoV-2","GAACGTTACCTTATCG",2,10.85,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F8E K56H I88G",3
"lib1","SARS-CoV-2","GAACTAAAAACTGGAA",3,34.03,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S45Y N58L N109Y E135V Y178F",5
"lib1","SARS-CoV-2","GAACTAAAAGCTACGC",1,1.08,NA,NA,NA,NA,NA,NA,"stop","A81E D97M Y175*",3
"lib1","SARS-CoV-2","GAACTAAAAGTTATTA",3,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131I N157Y S184K T201S",4
"lib1","SARS-CoV-2","GAACTAAAGATAAGCC",1,19.28,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G117N S129F L162R L183C",4
"lib1","SARS-CoV-2","GAACTAAATACTTATT",3,20.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49V S108I",2
"lib1","SARS-CoV-2","GAACTAAATTATAATA",5,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R F62Y D98R I104K S139F",5
"lib1","SARS-CoV-2","GAACTAAATTATATAT",2,80.55,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6A Y175E T201Q",3
"lib1","SARS-CoV-2","GAACTAACAACACAAA",1,8.4,8.69,-2.08,0.25,1.5,1,0.04,"1 nonsynonymous","W106D",1
"lib1","SARS-CoV-2","GAACTAACACAATTTT",4,53.78,10.14,-0.63,0.1,2.28,1.02,0,">1 nonsynonymous","I2V W23P S129G K198A",4
"lib1","SARS-CoV-2","GAACTAACACATTTCA",3,15.32,7.71,-3.06,0.14,1.98,1.08,0,">1 nonsynonymous","N1Q G74Q D90A S147Y P191D",5
"lib1","SARS-CoV-2","GAACTAACGACATCGG",2,25.48,7.25,-3.52,0.34,1.5,1.23,0.03,">1 nonsynonymous","L5T I138F Y175K",3
"lib1","SARS-CoV-2","GAACTAAGCAATCTTT",8,1.34,NA,NA,NA,NA,NA,NA,"stop","L5Q G83* P96K",3
"lib1","SARS-CoV-2","GAACTAAGCCTAACTG",5,15.54,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","G101S N118F R136T P149Q",4
"lib1","SARS-CoV-2","GAACTAAGTAACGCCC",7,0.18,NA,NA,NA,NA,NA,NA,"stop","D34* K56P F70I P96R",4
"lib1","SARS-CoV-2","GAACTAAGTCAGAAAC",3,12.04,10.23,-0.54,0.15,2.39,1,0.01,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","GAACTAATAAACTCAA",9,171,10.87,0.11,0.06,2.9,1.05,0,">1 nonsynonymous","T85R L122Q",2
"lib1","SARS-CoV-2","GAACTAATACCTATCT",14,194.11,7.27,-3.49,0.14,1.56,1.14,0,"1 nonsynonymous","C150H",1
"lib1","SARS-CoV-2","GAACTAATACTACCGG",4,35.85,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4A N120A Y123C F156R F167R",5
"lib1","SARS-CoV-2","GAACTAATAGCACAAA",7,120.24,10.67,-0.09,0.04,2.93,1.01,0,">1 nonsynonymous","K128V V173N",2
"lib1","SARS-CoV-2","GAACTAATATAAAATA",5,66.96,10.79,0.02,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTAATGCACCGCA",2,32.91,10.2,-0.57,0.32,1.81,1.03,0.06,">1 nonsynonymous","D34S G51A",2
"lib1","SARS-CoV-2","GAACTAATGTAAATGC",3,135.41,8.83,-1.94,0.09,2.75,1.07,0,">1 nonsynonymous","Y119L S147K G152A",3
"lib1","SARS-CoV-2","GAACTACAAAATCCAA",3,34.56,10.29,-0.48,0.11,2.22,1.06,0.01,">1 nonsynonymous","T55H T85Q K94S",3
"lib1","SARS-CoV-2","GAACTACAAACCGTAC",4,127.29,10.5,-0.26,0.09,2.77,1.19,0,"1 nonsynonymous","R78L",1
"lib1","SARS-CoV-2","GAACTACAAGTTGGCT",1,24.38,10.63,-0.13,0.05,2.9,1.06,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","GAACTACAATGACAAT",1,5.4,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T46L R124D G174F",3
"lib1","SARS-CoV-2","GAACTACACTGCGATT",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65G I88F V115Q V173N",4
"lib1","SARS-CoV-2","GAACTACATAAAAAGA",7,1.22,NA,NA,NA,NA,NA,NA,"stop","A42* L60A A81M Q144*",4
"lib1","SARS-CoV-2","GAACTACATGAATGAT",1,7.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1K P7T C49L T148I",4
"lib1","SARS-CoV-2","GAACTACATGTGATCA",3,97.26,10.04,-0.72,0.05,2.96,1,0,">1 nonsynonymous","D98C F156L V173K",3
"lib1","SARS-CoV-2","GAACTACCAAGCACAT",4,32.93,9.98,-0.79,0.08,2.55,1.02,0,"1 nonsynonymous","L162T",1
"lib1","SARS-CoV-2","GAACTACCAAGGACAT",7,99.22,10.73,-0.03,0.09,2.91,1.06,0,"1 nonsynonymous","L187T",1
"lib1","SARS-CoV-2","GAACTACCTCGACATT",11,112.93,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","E10A V11F V37L K87D D112N G146M",6
"lib1","SARS-CoV-2","GAACTACCTGTCGTAT",2,75.17,10.77,0.01,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTACGAGGTTTTT",5,20.02,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L95V R127A K132V G152M",4
"lib1","SARS-CoV-2","GAACTACGTCCTCTGC",6,59.66,10.73,-0.04,0.07,2.87,1.04,0,"1 nonsynonymous","K132T",1
"lib1","SARS-CoV-2","GAACTACTAGACAAGT",2,15.86,6,-4.76,2,1.5,1.29,0.08,">1 nonsynonymous","F12P Y119N",2
"lib1","SARS-CoV-2","GAACTACTCACATATC",3,87.41,9.25,-1.52,0.17,1.65,1.17,0.01,">1 nonsynonymous","G51V N64I G83K",3
"lib1","SARS-CoV-2","GAACTAGAACTTAAAA",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46N S147V",2
"lib1","SARS-CoV-2","GAACTAGATGAACAGG",2,23.51,6.55,-4.22,0.37,1.5,1.11,0.01,">1 nonsynonymous","V71L P82Q",2
"lib1","SARS-CoV-2","GAACTAGCTGTATAAC",1,88.11,10.69,-0.07,0.08,2.88,1.07,0,">1 nonsynonymous","L5A T100A",2
"lib1","SARS-CoV-2","GAACTAGTAAGATGTT",1,32.31,9.2,-1.56,0.14,1.78,1.14,0.01,">1 nonsynonymous","L38I W106V G152D",3
"lib1","SARS-CoV-2","GAACTAGTAATCTACA",3,5.04,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5R F44S A89R I104R I142Q F160A",6
"lib1","SARS-CoV-2","GAACTAGTATATTAAA",5,45.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22Q D90H Y159E",3
"lib1","SARS-CoV-2","GAACTAGTATCATATC",13,12.55,NA,NA,NA,NA,NA,NA,"stop","F17S T55L W106G Y143* Y178S K198H",6
"lib1","SARS-CoV-2","GAACTAGTGGACAAAT",10,32.58,6.61,-4.16,0.31,1.5,1.1,0.02,">1 nonsynonymous","T63A R78P K94W",3
"lib1","SARS-CoV-2","GAACTAGTTCTCTGCA",2,43.25,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N30V T55V L131G",3
"lib1","SARS-CoV-2","GAACTATAAAAACTAG",3,43.68,10.19,-0.58,0.04,2.91,1.05,0,">1 nonsynonymous","N1P F156S",2
"lib1","SARS-CoV-2","GAACTATAAGCTCATA",3,73.85,10.45,-0.31,0.04,2.84,1.07,0,">1 nonsynonymous","E10A A42T",2
"lib1","SARS-CoV-2","GAACTATACAATACAA",1,56.26,8.48,-2.29,0.13,2.95,1.03,0.01,">1 nonsynonymous","L5V C61S K87N T170L",4
"lib1","SARS-CoV-2","GAACTATACCCAGATG",4,17.12,6.01,-4.76,0.77,1.5,1.16,0.01,">1 nonsynonymous","C6S N40A F62R E141R G152D V182C T201S",7
"lib1","SARS-CoV-2","GAACTATATAGGATCT",1,17.93,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","V77N D97N T201V",3
"lib1","SARS-CoV-2","GAACTATCACCGCTTG",1,23.32,9.44,-1.32,0.09,2.86,1.1,0,">1 nonsynonymous","E154I T170S",2
"lib1","SARS-CoV-2","GAACTATCCATACTGC",1,5.09,6.47,-4.29,0.86,1.5,1.15,0.03,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","GAACTATGTTATATCC",10,36.68,6.9,-3.86,0.49,1.5,1.09,0.05,">1 nonsynonymous","V115L D137V P161Q",3
"lib1","SARS-CoV-2","GAACTATTAAACCGAA",2,2.08,NA,NA,NA,NA,NA,NA,"stop","L122* S129* Q168V",3
"lib1","SARS-CoV-2","GAACTATTAACGAAAA",15,83.18,7.93,-2.84,0.19,1.5,1.15,0.01,">1 nonsynonymous","G86C N130F",2
"lib1","SARS-CoV-2","GAACTATTTAAAATAC",11,59.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T63Y T85L S113R Y121L S129H N157R",6
"lib1","SARS-CoV-2","GAACTCAACAGTACCC",2,13.53,10.93,0.16,0.09,2.96,1.02,0,">1 nonsynonymous","N1T T85K",2
"lib1","SARS-CoV-2","GAACTCAACGCACAGC",8,166.04,10.78,0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTCAATAAACATC",2,7.78,8.6,-2.16,0.09,2.91,1,0.01,">1 nonsynonymous","G9S F126G Q144A",3
"lib1","SARS-CoV-2","GAACTCACATTGTGGA",5,89.53,10.25,-0.51,0.05,2.82,1.04,0,">1 nonsynonymous","D59I I138E",2
"lib1","SARS-CoV-2","GAACTCACTAGATCGA",4,57,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C6P N109L Y119S Q144P",4
"lib1","SARS-CoV-2","GAACTCAGATTAAAAT",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L N107Q E141P",3
"lib1","SARS-CoV-2","GAACTCAGGAAATGGC",2,13.79,8.98,-1.79,0.16,2.27,1.18,0.01,">1 nonsynonymous","Y35K N109H",2
"lib1","SARS-CoV-2","GAACTCATAAGCAAAT",1,1.49,NA,NA,NA,NA,NA,NA,"stop","S41L D90C F156* Q176S",4
"lib1","SARS-CoV-2","GAACTCATATAGACCA",2,0.93,NA,NA,NA,NA,NA,NA,"stop","R16V N58H P82* Y119A E135S S184V",6
"lib1","SARS-CoV-2","GAACTCATCCTGAGCA",1,11.23,6,-4.76,2,1.5,1.04,0.03,">1 nonsynonymous","R25S F47S D90Y",3
"lib1","SARS-CoV-2","GAACTCCAAGGACAAT",3,23.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V V71R N92F N157L",4
"lib1","SARS-CoV-2","GAACTCCAATAACATA",11,264,10.44,-0.33,0.04,2.93,1.03,0,">1 nonsynonymous","P54H K87L",2
"lib1","SARS-CoV-2","GAACTCCACTCACTAG",1,203.73,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","L57Y Y143G Q168K",3
"lib1","SARS-CoV-2","GAACTCCCCAACAAAG",5,178.23,8.72,-2.04,0.14,1.99,1.15,0.01,">1 nonsynonymous","Y91F F167L",2
"lib1","SARS-CoV-2","GAACTCCCTAGATGCC",3,142.73,8.74,-2.02,0.07,2.52,1.1,0,">1 nonsynonymous","V52L R78N N151S Q176H",4
"lib1","SARS-CoV-2","GAACTCCGACCAGTTA",3,9.99,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V11C F99S V103G K114I P169C L183M",6
"lib1","SARS-CoV-2","GAACTCCGATACTAAG",3,22.01,10.82,0.05,0.12,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTCCGGTGGACAC",5,60.45,10.44,-0.32,0.06,2.9,1.04,0,">1 nonsynonymous","F8L A18C",2
"lib1","SARS-CoV-2","GAACTCCTGATTGATT",5,112.48,10.76,-0.01,0.07,2.86,1.1,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","GAACTCCTGCACTAAT",1,29.59,9.81,-0.95,0.12,2.41,1,0.01,"1 nonsynonymous","V20S",1
"lib1","SARS-CoV-2","GAACTCGAAGAAGAAT",2,0.78,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib1","SARS-CoV-2","GAACTCGACAACATAT",1,4.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201P",1
"lib1","SARS-CoV-2","GAACTCGACATCTGAA",5,78.16,10.58,-0.18,0.05,2.9,1.04,0,">1 nonsynonymous","A89S E141I F160C P197I",4
"lib1","SARS-CoV-2","GAACTCGACTCTCTGT",3,17.75,10.67,-0.09,0.05,2.97,1.03,0,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","GAACTCGCATCATACT",1,33.68,10.22,-0.54,0.04,2.81,1.09,0,">1 nonsynonymous","N107S A192D",2
"lib1","SARS-CoV-2","GAACTCGCCAACACAT",1,9.31,10.85,0.08,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTCGTCCTACGTC",1,39.53,8.69,-2.08,0.09,2.82,1.08,0,">1 nonsynonymous","L60N Y119P N171L",3
"lib1","SARS-CoV-2","GAACTCTAACCCGGAG",3,59.26,6.38,-4.38,0.6,1.5,1.26,0.03,">1 nonsynonymous","P82N T140K",2
"lib1","SARS-CoV-2","GAACTCTCTGCTAAAA",2,11.12,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S53M I88L S113P Q168L P197Q",5
"lib1","SARS-CoV-2","GAACTCTGATTATTAA",7,5.04,NA,NA,NA,NA,NA,NA,"stop","S45* D98F W106K",3
"lib1","SARS-CoV-2","GAACTCTGTAGCATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D34L S45R N107*",3
"lib1","SARS-CoV-2","GAACTCTTACTCTGTG",1,4.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82R",1
"lib1","SARS-CoV-2","GAACTCTTACTGGATC",6,22.85,9.49,-1.27,0.1,2.79,1.1,0,">1 nonsynonymous","N4C T85Y D98T L125S",4
"lib1","SARS-CoV-2","GAACTGAAATCTACAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","C61R P161Q K198*",3
"lib1","SARS-CoV-2","GAACTGAACTTAAGTC",5,75.31,8.61,-2.15,0.24,1.5,1.07,0.02,">1 nonsynonymous","G51S V71A",2
"lib1","SARS-CoV-2","GAACTGAATCATCGAC",1,13.03,9.18,-1.58,0.25,1.5,1,0.03,">1 nonsynonymous","L38N G51N G152L",3
"lib1","SARS-CoV-2","GAACTGACAATAGAGT",4,28.36,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","T55E N64I S113L P133R",4
"lib1","SARS-CoV-2","GAACTGACATAATGCG",1,24.3,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N64S A81F N107S Y119V Y143W",5
"lib1","SARS-CoV-2","GAACTGACCAAAAATG",2,12.41,10.82,0.06,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAACTGACCTAACCAA",5,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N Q144R C158S",3
"lib1","SARS-CoV-2","GAACTGACGAAGTTCT",5,36,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P7M K94D V103F V194I",4
"lib1","SARS-CoV-2","GAACTGACTGTATACC",6,71.5,10.63,-0.14,0.05,2.9,1.09,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","GAACTGAGGATACAGC",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I V77G D90F Y143E G152K",5
"lib1","SARS-CoV-2","GAACTGATAACTGTGA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","K56* G101A P149S",3
"lib1","SARS-CoV-2","GAACTGCACAATAAAG",3,1.08,NA,NA,NA,NA,NA,NA,"stop","C61* Q79E E141C",3
"lib1","SARS-CoV-2","GAACTGCACCAGTCTA",1,6.29,6,-4.76,0.93,2.9,1.26,0.01,">1 nonsynonymous","L5A S36P L57K D75S I138S T201W",6
"lib1","SARS-CoV-2","GAACTGCATAAATCCA",10,186.96,10.42,-0.34,0.04,2.91,1.02,0,">1 nonsynonymous","A18S G51R L60V",3
"lib1","SARS-CoV-2","GAACTGCCGAGGCACG",5,0,NA,NA,NA,NA,NA,NA,"stop","N110M Y119G Y165R L183F P191*",5
"lib1","SARS-CoV-2","GAACTGCTAATGTAAC",7,272.66,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","GAACTGCTCCAAGTTC",3,24.65,10.18,-0.58,0.34,1.5,1,0.06,">1 nonsynonymous","C31Y V52R",2
"lib1","SARS-CoV-2","GAACTGGACAGAATTA",5,83.04,9.54,-1.22,0.15,1.88,1.12,0.01,">1 nonsynonymous","C49L E154S T201M",3
"lib1","SARS-CoV-2","GAACTGGAGGCCTAGA",1,1.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAACTGGGAAAGTAAA",10,111.72,10.6,-0.16,0.04,2.93,1,0,">1 nonsynonymous","T3M K48Q S147I",3
"lib1","SARS-CoV-2","GAACTGGTTAAAATAT",1,13.09,10.31,-0.45,0.1,2.89,1.03,0.01,">1 nonsynonymous","Y35P K198D",2
"lib1","SARS-CoV-2","GAACTGTAAATTGACA",2,27.3,10.84,0.07,0.04,2.97,1.01,0,">1 nonsynonymous","T3K L122V",2
"lib1","SARS-CoV-2","GAACTGTAACCATGAG",9,69.8,6.29,-4.48,0.85,1.5,1.29,0.03,">1 nonsynonymous","F62S V103S",2
"lib1","SARS-CoV-2","GAACTGTACCATCTAT",3,25.09,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G9F E76S I88A",3
"lib1","SARS-CoV-2","GAACTGTCCAAGAAAA",3,27.19,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S69L A81I L122W",3
"lib1","SARS-CoV-2","GAACTGTCGACAACCG",2,36.31,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","W106N I142S P149S V153L",4
"lib1","SARS-CoV-2","GAACTGTGAAAGGGTT",5,41.31,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N1F T63Y G86R L95S Y165G",5
"lib1","SARS-CoV-2","GAACTGTTAACAGACC",2,0.64,NA,NA,NA,NA,NA,NA,"stop","L5I S29P A89* R136G",4
"lib1","SARS-CoV-2","GAACTGTTAACTAATC",3,45.73,10.76,0,0.12,2.96,1.03,0.01,">1 nonsynonymous","Y39A T201L",2
"lib1","SARS-CoV-2","GAACTTAAAACAGCTA",3,19.04,8.65,-2.11,0.25,1.67,1.09,0.02,">1 nonsynonymous","A22I I142K F160D",3
"lib1","SARS-CoV-2","GAACTTAACTGAATTA",11,256.42,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1F V37P F70R A81D S113V",5
"lib1","SARS-CoV-2","GAACTTACAAAGTTTT",3,35.64,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F62S D98F C150T",3
"lib1","SARS-CoV-2","GAACTTAGAAAGCCAT",2,15.47,NA,NA,NA,NA,NA,NA,"stop","L5S V32P D97R N130*",4
"lib1","SARS-CoV-2","GAACTTAGATACAAGG",7,10.31,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","GAACTTAGCTTTTATT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C49F Y91* D112*",3
"lib1","SARS-CoV-2","GAACTTAGTGATTTGC",1,17,10.51,-0.26,0.1,2.78,1.13,0,"1 nonsynonymous","A22T",1
"lib1","SARS-CoV-2","GAACTTATACGTCTGG",5,22.83,6.57,-4.2,0.63,1.5,1.25,0.04,">1 nonsynonymous","N4S L95P",2
"lib1","SARS-CoV-2","GAACTTATATTACTGA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","S19* R136P",2
"lib1","SARS-CoV-2","GAACTTATCAGACTAT",3,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A42L P82H N92K S113R G117R T140Y",7
"lib1","SARS-CoV-2","GAACTTATTAACGAGA",3,66.25,8.18,-2.58,0.16,1.5,1.09,0.01,">1 nonsynonymous","N1H Q168L V173S",3
"lib1","SARS-CoV-2","GAACTTCAACCCACCA",1,13.27,6.08,-4.69,0.85,1.5,1.13,0.03,">1 nonsynonymous","D34K S41I S139A C158M",4
"lib1","SARS-CoV-2","GAACTTCAAGAACTGG",5,53.68,9.77,-0.99,0.11,2.38,1.1,0,"1 nonsynonymous","S19K",1
"lib1","SARS-CoV-2","GAACTTCAAGAATAAC",2,27.58,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C6Q V11I Y35T D90V D97I",5
"lib1","SARS-CoV-2","GAACTTCAGAGGGCCT",3,17.45,7.41,-3.36,0.41,2.19,1.5,0.04,">1 nonsynonymous","T3I G51D Q84L P197Q",4
"lib1","SARS-CoV-2","GAACTTCCATATAAAA",5,103.12,10.54,-0.23,0.06,2.93,1.05,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","GAACTTCCTGAGTTGG",8,113.05,10.72,-0.04,0.07,2.88,1.06,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","GAACTTCGAGATAAAA",17,114.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10K F17M V32L S43T L57V Y66C L95H",7
"lib1","SARS-CoV-2","GAACTTCGGCATAATT",8,590.05,10.62,-0.14,0.03,2.9,1.05,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","GAACTTCGTAGCAGGC",4,38.96,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T15V W23L L38S C102V F167S",5
"lib1","SARS-CoV-2","GAACTTCTGCACGGTT",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119R C150S N171T",3
"lib1","SARS-CoV-2","GAACTTCTTCATAAGT",2,41.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I80G E135T",2
"lib1","SARS-CoV-2","GAACTTGATAGCTAAA",12,99.81,9.99,-0.78,0.09,2.08,1.04,0,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","GAACTTGCAGGACACG",7,43.25,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2Y L38F A89R Y159N F167R",5
"lib1","SARS-CoV-2","GAACTTGCGCCGCAAC",11,155.09,8.73,-2.03,0.21,1.5,1,0.02,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","GAACTTGGAAAGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66T Y93L Y119G G152K G166T T201*",6
"lib1","SARS-CoV-2","GAACTTGGACACGGCG",1,32.55,10.72,-0.04,0.14,2.79,1.14,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GAACTTGTAGGTCAAA",4,20.5,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","N107L Q144M N157S",3
"lib1","SARS-CoV-2","GAACTTTAAAAGTAAT",2,52.19,9.48,-1.28,0.09,1.92,1.18,0,">1 nonsynonymous","V11C A18K Y35I",3
"lib1","SARS-CoV-2","GAACTTTATCTCAACT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","I2S A14* W106S Y143W N171Y K198Q",6
"lib1","SARS-CoV-2","GAACTTTCAACGGGTT",1,0.97,NA,NA,NA,NA,NA,NA,"stop","F17D A105M L125*",3
"lib1","SARS-CoV-2","GAACTTTCGGAGATTA",10,184.64,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V11Y I88D N109L F156S C195D",5
"lib1","SARS-CoV-2","GAACTTTCTAAATGAG",1,7.12,7.82,-2.95,0.23,2.97,1.16,0.02,">1 nonsynonymous","S36I S113V",2
"lib1","SARS-CoV-2","GAACTTTGAGTATAAA",1,12.43,10.68,-0.08,0.1,2.82,1,0,">1 nonsynonymous","G83R K87V",2
"lib1","SARS-CoV-2","GAACTTTGATACTAAC",2,0.89,NA,NA,NA,NA,NA,NA,"stop","I2Q D68M N107*",3
"lib1","SARS-CoV-2","GAACTTTGTATAGAAG",11,0.63,NA,NA,NA,NA,NA,NA,"stop","S43H D98F C102A P149* G152R",5
"lib1","SARS-CoV-2","GAACTTTTAATCTAAA",1,82.59,10.62,-0.15,0.05,2.93,1,0,">1 nonsynonymous","L95M K114R",2
"lib1","SARS-CoV-2","GAACTTTTACTAGATG",1,13.18,9.54,-1.23,0.15,2.78,1.09,0.01,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","GAACTTTTAGGACAAG",5,112.38,8.58,-2.19,0.16,2.07,1.1,0.01,">1 nonsynonymous","F62M A105M Y119S",3
"lib1","SARS-CoV-2","GAACTTTTATAAGGAG",1,40.96,10.18,-0.59,0.1,2.64,1.03,0,"1 nonsynonymous","V77C",1
"lib1","SARS-CoV-2","GAACTTTTCGCCCAAC",3,76.28,10.2,-0.57,0.11,2.81,1,0.01,">1 nonsynonymous","A33R C61N T201V",3
"lib1","SARS-CoV-2","GAACTTTTCTTAAAGT",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N E10V F167N",3
"lib1","SARS-CoV-2","GAACTTTTGTCCCACG",8,106.22,7.26,-3.51,0.15,1.52,1.16,0.01,">1 nonsynonymous","G9T C31S Y39A Y165M",4
"lib1","SARS-CoV-2","GAAGAAAAAAAATTCC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S45* V71S D98M",3
"lib1","SARS-CoV-2","GAAGAAAAACTACAAG",9,1.07,NA,NA,NA,NA,NA,NA,"stop","G86* F99V",2
"lib1","SARS-CoV-2","GAAGAAAAACTATACT",1,15.53,10.76,-0.01,0.1,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGAAAACAGTTTAA",2,46.57,10.62,-0.14,0.05,2.93,1.02,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","GAAGAAAACCACGCTT",1,54.4,10.34,-0.43,0.07,2.91,1.08,0,">1 nonsynonymous","L5I I142H",2
"lib1","SARS-CoV-2","GAAGAAAAGGTGTAAA",3,33.52,9.95,-0.82,0.08,2.56,1.02,0,">1 nonsynonymous","G9N V37N P96C",3
"lib1","SARS-CoV-2","GAAGAAAATAGGGGAG",2,5.27,NA,NA,NA,NA,NA,0.51,">1 nonsynonymous","V37I N64Q L95N Y121G E141Y",5
"lib1","SARS-CoV-2","GAAGAAAATCGCAGAC",5,143.47,10.56,-0.21,0.04,2.89,1.05,0,"1 nonsynonymous","I104A",1
"lib1","SARS-CoV-2","GAAGAAACAAAGAGTA",6,206.88,6.85,-3.91,0.22,1.5,1.13,0.01,">1 nonsynonymous","F44I G83S Y119D G155L",4
"lib1","SARS-CoV-2","GAAGAAACAGGATTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","I2N L95R N110* N130S",4
"lib1","SARS-CoV-2","GAAGAAACATGAGCGG",2,29.92,9.92,-0.85,0.08,2.7,1.03,0.01,">1 nonsynonymous","V32C Y178I",2
"lib1","SARS-CoV-2","GAAGAAACATTTAAAC",2,53.78,10.11,-0.66,0.05,2.95,1.02,0,">1 nonsynonymous","P7T G174R H189N",3
"lib1","SARS-CoV-2","GAAGAAACATTTGATA",13,419.48,8.21,-2.56,0.13,1.74,1.12,0.01,">1 nonsynonymous","S43E A105W Q176A",3
"lib1","SARS-CoV-2","GAAGAAACCAATATCT",1,39.25,10.38,-0.38,0.06,2.86,1.02,0,"1 nonsynonymous","S36C",1
"lib1","SARS-CoV-2","GAAGAAACCTGCGAGC",2,84.01,10.63,-0.13,0.05,2.88,1.05,0,">1 nonsynonymous","G9D F156L L162I",3
"lib1","SARS-CoV-2","GAAGAAACCTTTATTA",6,26.13,9.64,-1.12,0.14,1.86,1.14,0.01,">1 nonsynonymous","T15R G83I",2
"lib1","SARS-CoV-2","GAAGAAACTATATCTG",3,0,NA,NA,NA,NA,NA,NA,"stop","F17N V77* N107S E135K",4
"lib1","SARS-CoV-2","GAAGAAAGAACGAACT",10,99.73,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I88V D112C",2
"lib1","SARS-CoV-2","GAAGAAAGAATAAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P S69V V103N Y119C",4
"lib1","SARS-CoV-2","GAAGAAAGTAATGTCA",4,38.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V R73M Q79E V115R",4
"lib1","SARS-CoV-2","GAAGAAAGTGAACAAC",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R G155N T201G",3
"lib1","SARS-CoV-2","GAAGAAAGTTGGTACC",9,27.07,6,-4.76,2,1.56,1.26,0.05,">1 nonsynonymous","F12R C49F K87N Y143E",4
"lib1","SARS-CoV-2","GAAGAAATCAATCTGT",3,115.6,9.76,-1.01,0.09,1.97,1.1,0,">1 nonsynonymous","G9D A14I V32R K56C T100L I138N",6
"lib1","SARS-CoV-2","GAAGAAATCCGAAATT",2,2.77,NA,NA,NA,NA,NA,NA,"stop","F12R I28K D90Y R127L F134R Q176*",6
"lib1","SARS-CoV-2","GAAGAAATCTTACTAA",3,51.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90C K128V R136S",3
"lib1","SARS-CoV-2","GAAGAAATTGGACAAA",3,30.75,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R124P G155V",2
"lib1","SARS-CoV-2","GAAGAACAAAAATTGT",3,1.7,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GAAGAACACATATCAT",1,15.42,8.99,-1.78,0.18,2.19,1.39,0.01,">1 nonsynonymous","T55F N64Q G74R",3
"lib1","SARS-CoV-2","GAAGAACACGCCACTT",1,43.99,9.46,-1.3,0.24,2.07,1.04,0.02,">1 nonsynonymous","F12N Y119S T201G",3
"lib1","SARS-CoV-2","GAAGAACACTCTATCT",7,25.61,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V71R A89S N107S",3
"lib1","SARS-CoV-2","GAAGAACCATCTTACG",4,66.12,6.18,-4.58,0.58,1.5,1.21,0.01,">1 nonsynonymous","A18P W23Q V71G I142L",4
"lib1","SARS-CoV-2","GAAGAACCGAGCAAGG",4,70.25,10.14,-0.62,0.04,2.82,1.04,0,">1 nonsynonymous","I2H Y66H I138K",3
"lib1","SARS-CoV-2","GAAGAACCTCACATAG",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137R F167V L183S",3
"lib1","SARS-CoV-2","GAAGAACGCCTGAAAG",2,40.29,9.96,-0.8,0.16,2.27,1.06,0.01,">1 nonsynonymous","N40L K48L S53L",3
"lib1","SARS-CoV-2","GAAGAACTGCGAAGTC",18,94.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A33K A89Q Y123A L162P T170Y",5
"lib1","SARS-CoV-2","GAAGAACTTACACGTC",5,69.98,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Y66C N107F N118Y I138K",4
"lib1","SARS-CoV-2","GAAGAAGAACAATGCC",8,0.62,NA,NA,NA,NA,NA,NA,"stop","I2* N13K P96Y",3
"lib1","SARS-CoV-2","GAAGAAGAATTCATTG",3,0,NA,NA,NA,NA,NA,NA,"stop","G9V D97*",2
"lib1","SARS-CoV-2","GAAGAAGACACCGTCA",1,8.57,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","F12H K26P C61N",3
"lib1","SARS-CoV-2","GAAGAAGACATTATTG",5,75.06,10.77,0.01,0.06,2.94,1.02,0,">1 nonsynonymous","S43T I138C",2
"lib1","SARS-CoV-2","GAAGAAGAGGTTATTA",5,31.7,6,-4.76,1.67,1.5,1.15,0.02,">1 nonsynonymous","S45I K87C V103L N151C",4
"lib1","SARS-CoV-2","GAAGAAGATTCGAATG",3,8.73,6,-4.76,2,3,1.07,0,">1 nonsynonymous","T3Y S113Y E135L",3
"lib1","SARS-CoV-2","GAAGAAGCCACCTTCG",3,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94H N120T",2
"lib1","SARS-CoV-2","GAAGAAGGCTCTCACA",1,36.39,6.5,-4.26,0.46,1.5,1.08,0.03,">1 nonsynonymous","W106A C158Y",2
"lib1","SARS-CoV-2","GAAGAATAATACTAAG",2,6.39,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","G83H F99L L131R",3
"lib1","SARS-CoV-2","GAAGAATCATCATATG",7,144.15,9.28,-1.48,0.13,1.7,1.11,0.01,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","GAAGAATCCCTAACAT",3,33.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94A K128W A145N P149I",4
"lib1","SARS-CoV-2","GAAGAATGCTAGGGAA",5,32.82,6.11,-4.65,1.05,1.5,1.26,0.02,">1 nonsynonymous","I80A Q84K I138L",3
"lib1","SARS-CoV-2","GAAGAATGGCTGCAGT",6,38.01,9.41,-1.36,0.17,1.62,1.09,0.02,">1 nonsynonymous","F44P Y66S T100S P197E",4
"lib1","SARS-CoV-2","GAAGAATGTTAATCTC",1,1.68,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAAGAATTACTATAGT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","C6L V11T R127*",3
"lib1","SARS-CoV-2","GAAGAATTATGAAATA",4,0.18,NA,NA,NA,NA,NA,NA,"stop","Y39* F62I",2
"lib1","SARS-CoV-2","GAAGAATTTCACCCAC",4,28.54,10.15,-0.62,0.11,2.43,1.05,0.01,">1 nonsynonymous","R27K F47Y K132P",3
"lib1","SARS-CoV-2","GAAGACAAACAGTTGT",5,65.83,9.04,-1.73,0.27,1.5,1.01,0.04,">1 nonsynonymous","W23R Y39E",2
"lib1","SARS-CoV-2","GAAGACAAACATCCGG",4,34.38,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N64F D90P",2
"lib1","SARS-CoV-2","GAAGACAAGTTCAGCG",9,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65M F156A",2
"lib1","SARS-CoV-2","GAAGACAATCACTGAA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","R27* C49E L95I Y143T G152N",5
"lib1","SARS-CoV-2","GAAGACACAACTACAA",3,62.63,10.23,-0.53,0.08,2.8,1.01,0,">1 nonsynonymous","D98C I104M",2
"lib1","SARS-CoV-2","GAAGACAGAATGTAAC",3,62.77,10.83,0.07,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGACAGAATTTAAA",4,43.07,9.19,-1.58,0.32,1.5,1,0.05,">1 nonsynonymous","L57S F134L S164M",3
"lib1","SARS-CoV-2","GAAGACATCTAGAAAA",2,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L S41L Y66I A89I P96R L131D",6
"lib1","SARS-CoV-2","GAAGACCAGTTAATGA",1,15.77,6,-4.76,2,1.5,1.37,0.06,">1 nonsynonymous","S19P T63H C158L",3
"lib1","SARS-CoV-2","GAAGACCCGATTAGTC",5,34,8.77,-2,0.16,1.74,1.17,0.01,">1 nonsynonymous","I2T Y50C",2
"lib1","SARS-CoV-2","GAAGACGAGAGGTAAG",1,6.58,10.14,-0.62,0.15,2.78,1,0.01,">1 nonsynonymous","V37A I104S T140N V153M",4
"lib1","SARS-CoV-2","GAAGACGATCCCATTA",3,61.78,10.59,-0.18,0.03,2.92,1.03,0,">1 nonsynonymous","P7L N64T L122Y",3
"lib1","SARS-CoV-2","GAAGACGATGAATTAT",6,39.49,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y175G V181R",2
"lib1","SARS-CoV-2","GAAGACGGTGTCTTGC",1,17.52,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48L D112F N171K T201L",4
"lib1","SARS-CoV-2","GAAGACGGTTCATCAG",7,79.47,8.87,-1.9,0.19,1.5,1.04,0.02,">1 nonsynonymous","F12L L95C P191S",3
"lib1","SARS-CoV-2","GAAGACGTCACCAAAG",3,17.91,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P82G I104V P169V",3
"lib1","SARS-CoV-2","GAAGACGTGAATGCCA",4,0.67,NA,NA,NA,NA,NA,NA,"stop","R27L F70N K94A T100L G146* F156Y L187V",7
"lib1","SARS-CoV-2","GAAGACGTTTTCTTGA",2,29.8,9.51,-1.25,0.25,1.5,1,0.03,">1 nonsynonymous","A33P P82A K114A",3
"lib1","SARS-CoV-2","GAAGACTAGAATGTTG",7,5.69,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F99R E141V P169R",3
"lib1","SARS-CoV-2","GAAGACTATCAAATAG",1,21.23,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","GAAGACTATGTAACAA",3,25.7,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44S T85D K94T R179L",4
"lib1","SARS-CoV-2","GAAGACTCATACATCA",3,73.25,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2L K56L Y91D G101T L122R G152K T170S T201S",8
"lib1","SARS-CoV-2","GAAGACTCTGTGCATC",3,58.84,10.8,0.04,0.07,2.92,1.02,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","GAAGACTCTTAACCAG",4,56.09,9.13,-1.63,0.07,2.83,1.08,0,">1 nonsynonymous","Y119L T148F",2
"lib1","SARS-CoV-2","GAAGACTGACACCAAT",6,33.2,6,-4.76,1.48,1.5,1.19,0.02,"1 nonsynonymous","P161K",1
"lib1","SARS-CoV-2","GAAGACTGACCGTCTT",1,19.81,9.66,-1.1,0.12,2.44,1.02,0.02,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","GAAGACTGCAAGAGTT",3,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T F167G",2
"lib1","SARS-CoV-2","GAAGACTTACACGCCG",2,22.64,9.94,-0.82,0.05,2.93,1.02,0,">1 nonsynonymous","N120G Y143W",2
"lib1","SARS-CoV-2","GAAGACTTCTATGCCG",5,612.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44S A105P",2
"lib1","SARS-CoV-2","GAAGAGAACTCAACTG",6,1.44,NA,NA,NA,NA,NA,NA,"stop","F17A R25* V32E D59V D98G K132A N171R",7
"lib1","SARS-CoV-2","GAAGAGAACTGCCGAG",7,1.44,NA,NA,NA,NA,NA,NA,"stop","I2R A33R L57R D90* T140N G166Q V180Q",7
"lib1","SARS-CoV-2","GAAGAGACACTGTTAT",16,141.49,9.3,-1.46,0.09,1.88,1.12,0,">1 nonsynonymous","T55P P82V K87M",3
"lib1","SARS-CoV-2","GAAGAGAGATTACAGA",3,53.69,10.69,-0.08,0.07,2.88,1.04,0,">1 nonsynonymous","E10S V32Y S43F",3
"lib1","SARS-CoV-2","GAAGAGATAATTTTCT",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121T Q168N",2
"lib1","SARS-CoV-2","GAAGAGATATATGACA",7,49.21,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49D T55G Q79A",3
"lib1","SARS-CoV-2","GAAGAGATCAAATATA",3,22.33,10.51,-0.25,0.39,1.5,1.06,0.08,">1 nonsynonymous","G9M V37Q A89R L95S Y119L G172V E186G",7
"lib1","SARS-CoV-2","GAAGAGATGAGAGCTA",6,65.55,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F44K D98T D137A G166S",4
"lib1","SARS-CoV-2","GAAGAGCAACATGAAT",9,0.29,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAAGAGGAGATCAAGC",1,16.54,8.16,-2.6,0.34,1.5,1.14,0.06,">1 nonsynonymous","A42P C61H A105D",3
"lib1","SARS-CoV-2","GAAGAGGATCTAGCAG",4,62.04,9.9,-0.86,0.11,2.02,1.06,0,"1 nonsynonymous","A14W",1
"lib1","SARS-CoV-2","GAAGAGGCCAGCAAAT",2,12.98,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","T63R G74R V103K F134T",4
"lib1","SARS-CoV-2","GAAGAGGCTGTTGCCA",5,18.44,10.18,-0.58,0.13,2.66,1.13,0.01,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","GAAGAGGGTAGCATTA",4,46.63,8.74,-2.03,0.09,2.48,1.09,0,">1 nonsynonymous","S41K R73A T140E P149I",4
"lib1","SARS-CoV-2","GAAGAGGTTGGATATA",8,128.8,10.63,-0.14,0.06,2.84,1.03,0,">1 nonsynonymous","P149L V173N",2
"lib1","SARS-CoV-2","GAAGAGTGCTCTTATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21A E76F K87L V103A L131V V173N S200P",7
"lib1","SARS-CoV-2","GAAGAGTGGATCTTCT",10,16.13,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13S S19A S41I G101V S108C",5
"lib1","SARS-CoV-2","GAAGAGTTATACCATG",2,86.06,10.74,-0.03,0.07,2.9,1.08,0,">1 nonsynonymous","P54E S200F",2
"lib1","SARS-CoV-2","GAAGAGTTTCATTTCA",1,26.32,6.79,-3.97,0.56,1.5,1.16,0.04,">1 nonsynonymous","N58M Y143C N171C",3
"lib1","SARS-CoV-2","GAAGATAAAAATTATA",9,57.96,6,-4.76,1.66,1.5,1.14,0,">1 nonsynonymous","A42T R124D",2
"lib1","SARS-CoV-2","GAAGATAAACCCACAG",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59Q I104S G117R G155S",4
"lib1","SARS-CoV-2","GAAGATAAACGGACAT",1,20.38,10.82,0.05,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGATAAAGAGTCAG",3,45.45,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10D N40S G51A L122C N130G G146K Q176M",7
"lib1","SARS-CoV-2","GAAGATAACAAACGCA",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L A89K N109K",3
"lib1","SARS-CoV-2","GAAGATAACAGATTTT",4,14.59,10.66,-0.1,0.06,2.9,1,0,">1 nonsynonymous","K87R P96S K128H",3
"lib1","SARS-CoV-2","GAAGATAACCGTGGCT",5,1.67,NA,NA,NA,NA,NA,NA,"stop","E10* N40P G51D K56L E141D V173Y",6
"lib1","SARS-CoV-2","GAAGATAATAATGGAA",3,11.52,6.78,-3.99,1.01,1.5,1.13,0.05,">1 nonsynonymous","P7V A14V D90H W106S L122M N157L",6
"lib1","SARS-CoV-2","GAAGATAATATATCAG",2,5.98,8.49,-2.27,0.5,1.63,1.13,0.07,">1 nonsynonymous","V77K D98T G166D",3
"lib1","SARS-CoV-2","GAAGATAATGTGACCA",2,17.43,10.83,0.07,0.08,2.88,1.05,0,">1 nonsynonymous","Y39G K132R I142L V153I N171Y",5
"lib1","SARS-CoV-2","GAAGATACATGAAAAA",2,34.46,10.17,-0.6,0.08,2.86,1.04,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","GAAGATACCACTGATA",2,35.55,6,-4.76,0.91,2.09,1.08,0,">1 nonsynonymous","P7C Y39F I72M G83T P149L",5
"lib1","SARS-CoV-2","GAAGATAGAAGTTATT",1,17.26,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W106K R124C N151T",3
"lib1","SARS-CoV-2","GAAGATAGACAACCCT",2,53.03,10.43,-0.34,0.08,2.56,1.05,0,">1 nonsynonymous","L5P D90K Y123L",3
"lib1","SARS-CoV-2","GAAGATAGTTCTAACC",4,7.12,10.64,-0.13,0.23,2.81,1.06,0.02,">1 nonsynonymous","P54L K128L I138L",3
"lib1","SARS-CoV-2","GAAGATATAACCCATT",5,50.49,10.66,-0.11,0.06,2.93,1.04,0,"1 nonsynonymous","C195A",1
"lib1","SARS-CoV-2","GAAGATATCAAATAAT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","G9T T15* E141Y T148A",4
"lib1","SARS-CoV-2","GAAGATATGGAACTGT",3,21.79,9.29,-1.48,0.08,2.87,1.09,0,">1 nonsynonymous","T85E K114P",2
"lib1","SARS-CoV-2","GAAGATATTGGATTAT",8,21.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1A S41Q G51V D59S F99I",5
"lib1","SARS-CoV-2","GAAGATCAAACACATT",8,86.35,10.46,-0.31,0.06,2.83,1.07,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","GAAGATCAACCTTATC",2,6.86,9.25,-1.51,0.07,2.87,1.13,0,"1 nonsynonymous","Y119I",1
"lib1","SARS-CoV-2","GAAGATCAATACAACC",4,44.46,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","T15I V77G D90T S164V A190E",5
"lib1","SARS-CoV-2","GAAGATCCCTACAAAG",1,18.74,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G9A F70A S129P",3
"lib1","SARS-CoV-2","GAAGATCTCAAACCTA",3,47.03,10.13,-0.63,0.05,2.89,1,0,">1 nonsynonymous","C6S K128S",2
"lib1","SARS-CoV-2","GAAGATGAAAAACTTA",7,41.84,6.92,-3.84,0.45,1.5,1.28,0.05,">1 nonsynonymous","S45F P54L Y91I S139K C150S",5
"lib1","SARS-CoV-2","GAAGATGACGAAAGGT",11,73.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S C61M N118I Y165P",4
"lib1","SARS-CoV-2","GAAGATGTCCCGGTGT",3,8.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2R N13A I88S I104C",4
"lib1","SARS-CoV-2","GAAGATTACTCCCAAA",8,163.83,10.32,-0.44,0.04,2.86,1.01,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","GAAGATTACTGCAGTA",3,20.95,10.86,0.09,0.08,3,1,0,"1 nonsynonymous","S200M",1
"lib1","SARS-CoV-2","GAAGATTAGGACCGGA",4,1.14,NA,NA,NA,NA,NA,NA,"stop","F70L G174S L183*",3
"lib1","SARS-CoV-2","GAAGATTATTTCACGT",7,134.86,10.74,-0.02,0.04,2.93,1.03,0,"1 nonsynonymous","N151L",1
"lib1","SARS-CoV-2","GAAGATTCACGGGTTG",8,19.05,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K56G V71K T85S",3
"lib1","SARS-CoV-2","GAAGATTCGAAAAAGT",10,136.72,8.44,-2.32,0.21,1.5,1.04,0.02,">1 nonsynonymous","Y35S D75S Y121V T201K",4
"lib1","SARS-CoV-2","GAAGATTGTTGCAATT",1,40.64,10.75,-0.02,0.06,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAGATTTACCATTCT",3,54.37,10.39,-0.37,0.05,2.85,1.11,0,">1 nonsynonymous","V37R Y39H T55V",3
"lib1","SARS-CoV-2","GAAGATTTCCTTTAAC",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R P54T K87W",3
"lib1","SARS-CoV-2","GAAGCAAAACAGTTAG",1,8.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9P V103T R136F",3
"lib1","SARS-CoV-2","GAAGCAAAGACATTCC",3,77.6,10.56,-0.2,0.05,2.89,1.03,0,">1 nonsynonymous","I2R L60G V115Y",3
"lib1","SARS-CoV-2","GAAGCAAATCACACAT",3,18.87,6,-4.76,1.99,1.87,1.12,0.01,">1 nonsynonymous","N13H L122S Y165A S184Y",4
"lib1","SARS-CoV-2","GAAGCACAAACAATTA",5,16.93,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N1R F17A N107M Y119V N130D C158S",6
"lib1","SARS-CoV-2","GAAGCACAAATTCAAA",8,43.73,6,-4.76,2,3,1.11,0,">1 nonsynonymous","A14H G86D V153M F185Y",4
"lib1","SARS-CoV-2","GAAGCACAATTACGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* C61N D68V N107*",4
"lib1","SARS-CoV-2","GAAGCACACCTTGGTA",7,125.61,10.77,0.01,0.09,2.87,1.1,0,"1 nonsynonymous","I2H",1
"lib1","SARS-CoV-2","GAAGCACAGTAATTGC",2,8.3,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y35A Y123F P133V R179A S184D",5
"lib1","SARS-CoV-2","GAAGCACATGAACCGG",1,12.14,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6W N13C A42G F99A Y119M I142W G155L S164V",8
"lib1","SARS-CoV-2","GAAGCACCAATAAGGA",1,33.21,10.25,-0.51,0.07,2.9,1,0,">1 nonsynonymous","C6V L122V",2
"lib1","SARS-CoV-2","GAAGCACCAGCTTATT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","GAAGCACTACTTATAC",1,11.08,7.31,-3.46,0.46,1.5,1.09,0.05,">1 nonsynonymous","V37F L95S E141G",3
"lib1","SARS-CoV-2","GAAGCACTATTGTATG",4,0.47,NA,NA,NA,NA,NA,NA,"stop","L5* L38N G83M T148L T170L",5
"lib1","SARS-CoV-2","GAAGCAGAATGTAATT",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N K56T C61H",3
"lib1","SARS-CoV-2","GAAGCAGACTTTTGTA",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L V103F T148Q",3
"lib1","SARS-CoV-2","GAAGCAGATGGCTACA",1,21.38,10.7,-0.07,0.1,3,1.01,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GAAGCAGCCCAAAAAT",2,40.32,9.63,-1.14,0.13,2.1,1.09,0.01,">1 nonsynonymous","L5Q L57S F62R",3
"lib1","SARS-CoV-2","GAAGCAGTAAATCGAA",2,5.25,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14T N30T G83S L95K T201G",5
"lib1","SARS-CoV-2","GAAGCATATTCAATAG",2,20.19,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","D34S C49V E141V",3
"lib1","SARS-CoV-2","GAAGCATGAATGCTTA",4,57.01,10.21,-0.56,0.06,2.78,1.02,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","GAAGCATGCAACCAGC",3,115.65,10.65,-0.11,0.07,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGCATTCCCTAGAA",2,70.58,8.8,-1.96,0.09,2.65,1.08,0,">1 nonsynonymous","G117S G152Y",2
"lib1","SARS-CoV-2","GAAGCCAACAATCTTT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","S184* K198S",2
"lib1","SARS-CoV-2","GAAGCCACTGAAAAGC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N4V K87* Y119M L162N",4
"lib1","SARS-CoV-2","GAAGCCACTTGTGATT",9,39.7,6.01,-4.76,1.19,1.5,1.15,0.03,">1 nonsynonymous","N1I Y93N Y119T",3
"lib1","SARS-CoV-2","GAAGCCAGAGTAACCA",1,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Y K128S T148S",3
"lib1","SARS-CoV-2","GAAGCCAGGTGCAGTG",6,61.63,10.07,-0.69,0.16,2.16,1.03,0.01,">1 nonsynonymous","W106Q T148L",2
"lib1","SARS-CoV-2","GAAGCCATACAAGATT",12,32.14,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S45I P96L",2
"lib1","SARS-CoV-2","GAAGCCATTGATGAGT",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V V20G F44Q G116Q F134P",5
"lib1","SARS-CoV-2","GAAGCCCAAATCCATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N92M N120* E135G G146V",4
"lib1","SARS-CoV-2","GAAGCCCAAGATAATG",1,36.31,10.88,0.11,0.09,2.9,1.04,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","GAAGCCCATTTGTACA",1,58.96,10.38,-0.39,0.09,2.77,1.06,0,">1 nonsynonymous","N58I G83K",2
"lib1","SARS-CoV-2","GAAGCCCCTCCTGCAT",1,9.69,10.74,-0.02,0.17,2.86,1.05,0.01,"1 nonsynonymous","N151P",1
"lib1","SARS-CoV-2","GAAGCCCGAAAGCGAA",9,102.67,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86F W106M",2
"lib1","SARS-CoV-2","GAAGCCCGATACCGAT",2,39.68,9.8,-0.96,0.09,1.93,1.04,0,">1 nonsynonymous","T3S K56I S69R",3
"lib1","SARS-CoV-2","GAAGCCCTCTTCCACA",1,6.88,9.67,-1.09,0.12,2.44,1.04,0,">1 nonsynonymous","Y91R E154L",2
"lib1","SARS-CoV-2","GAAGCCGAGGTGACAA",6,23.06,8.61,-2.15,0.35,1.5,1,0.05,">1 nonsynonymous","C49S E141S",2
"lib1","SARS-CoV-2","GAAGCCGAGTTAAAAA",6,0.59,NA,NA,NA,NA,NA,NA,"stop","Y21* N107T",2
"lib1","SARS-CoV-2","GAAGCCGAGTTTAAGG",9,30.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7H W106C F134C Q168M",4
"lib1","SARS-CoV-2","GAAGCCGCAGTACTCC",8,1.12,NA,NA,NA,NA,NA,NA,"stop","G9V G146L N151*",3
"lib1","SARS-CoV-2","GAAGCCGCCATTTCCC",5,2.2,NA,NA,NA,NA,NA,NA,"stop","C6V G86Y V115I Q176R T201*",5
"lib1","SARS-CoV-2","GAAGCCGGCGCCCAAT",4,11.22,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V77M A81K N92Y",3
"lib1","SARS-CoV-2","GAAGCCTAATACGGCG",2,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q C49G P197G",3
"lib1","SARS-CoV-2","GAAGCCTCCCTTAGTA",1,22.47,10.78,0.02,0.07,2.91,1.1,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","GAAGCCTTCATCATTA",1,14.44,9.79,-0.98,0.16,2.58,1.06,0.01,">1 nonsynonymous","A14L C61Y",2
"lib1","SARS-CoV-2","GAAGCCTTTACAAGAA",1,14.57,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3P N24P D98Y Y119P N171I",5
"lib1","SARS-CoV-2","GAAGCGAATAGTCTAT",8,109.2,10.68,-0.08,0.07,2.9,1.07,0,"1 nonsynonymous","N1R",1
"lib1","SARS-CoV-2","GAAGCGACAAAGTAAA",1,12.74,10.82,0.05,0.1,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGCGACAACGAAAA",2,11.41,8.97,-1.8,0.2,1.5,1.11,0.02,">1 nonsynonymous","T15L R136F",2
"lib1","SARS-CoV-2","GAAGCGAGGCCGGTAC",1,60.98,10.82,0.06,0.08,2.93,1.05,0,">1 nonsynonymous","L5V V37Q N64T N109V",4
"lib1","SARS-CoV-2","GAAGCGATGGATCTAA",2,78.35,10.34,-0.42,0.06,2.82,1.03,0,">1 nonsynonymous","V71L N130H",2
"lib1","SARS-CoV-2","GAAGCGATTCAAAAAC",1,5.33,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GAAGCGATTCCAATTA",4,39.2,9.64,-1.12,0.16,1.87,1.1,0.01,">1 nonsynonymous","D75Y P96S N120S I142L",4
"lib1","SARS-CoV-2","GAAGCGATTGATATAA",8,69.66,8.32,-2.45,0.32,1.5,1,0.04,">1 nonsynonymous","V11C W23T",2
"lib1","SARS-CoV-2","GAAGCGCAGGGCCCAT",1,18.39,6,-4.76,2,1.5,1.06,0.04,">1 nonsynonymous","N1T Y123P",2
"lib1","SARS-CoV-2","GAAGCGCTCACTTCAG",6,98.85,10.8,0.04,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGCGGCACCCCCTG",7,3.52,NA,NA,NA,NA,NA,NA,"stop","P82* A89Y",2
"lib1","SARS-CoV-2","GAAGCGGGTCGCGCTA",2,62.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N40D G86N Y165S",3
"lib1","SARS-CoV-2","GAAGCGGTATAATGAT",1,14.11,6,-4.76,2,1.5,1.18,0.08,">1 nonsynonymous","Y50L S69I",2
"lib1","SARS-CoV-2","GAAGCGTAAATAAGAG",4,26.89,7.68,-3.08,0.26,1.5,1.17,0.02,">1 nonsynonymous","E141S T148L N157V",3
"lib1","SARS-CoV-2","GAAGCGTAGTCTGCTA",1,118.4,6,-4.76,1.28,1.5,1.18,0.01,">1 nonsynonymous","D68G K198N",2
"lib1","SARS-CoV-2","GAAGCGTCAAGAATCC",1,2.11,NA,NA,NA,NA,NA,NA,"stop","N120* P161N",2
"lib1","SARS-CoV-2","GAAGCTAAAATGCCTG",6,83.82,9.29,-1.48,0.2,1.69,1.16,0.01,">1 nonsynonymous","T3L Y91I T148I F160V",4
"lib1","SARS-CoV-2","GAAGCTAACTCCTAAT",4,47.97,10.72,-0.05,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGCTAAGTACCATT",5,127.6,9.54,-1.22,0.04,2.86,1.09,0,">1 nonsynonymous","Y39V G117T",2
"lib1","SARS-CoV-2","GAAGCTAATATTAGAC",3,29.67,10.75,-0.01,0.04,2.93,1,0,">1 nonsynonymous","V37M C61N D90K",3
"lib1","SARS-CoV-2","GAAGCTAATGGCGAAG",9,23.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T46C D98P P133I N157V",4
"lib1","SARS-CoV-2","GAAGCTACGCAGTTCT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","C31T D68* D75* S129K",4
"lib1","SARS-CoV-2","GAAGCTACGCTGTATA",1,16.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N1F F12M V20S D68V K87N S147K",6
"lib1","SARS-CoV-2","GAAGCTAGAACCCCAG",4,59.49,10.86,0.1,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGCTATCACTACGA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","S41M K87* T100F P197T",4
"lib1","SARS-CoV-2","GAAGCTATGGTAACTA",3,76.25,9.38,-1.38,0.08,2.83,1.13,0,">1 nonsynonymous","R27T D98N Y119K P169L",4
"lib1","SARS-CoV-2","GAAGCTCACGCTGTAT",1,21.54,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A33R L60D G86W Q163T",4
"lib1","SARS-CoV-2","GAAGCTCCGACTTACA",1,8,9.93,-0.83,0.08,2.69,1.09,0,">1 nonsynonymous","C6V S36L",2
"lib1","SARS-CoV-2","GAAGCTCGTGAAAGAG",2,45.82,6,-4.76,1.09,1.5,1.16,0.02,">1 nonsynonymous","P96L G172R",2
"lib1","SARS-CoV-2","GAAGCTCTACTACTAG",1,10.92,7.21,-3.55,0.46,1.5,1.03,0.06,">1 nonsynonymous","A22L C61Y R124V D137P S184M P197K",6
"lib1","SARS-CoV-2","GAAGCTCTTACAAATC",1,28.76,6.62,-4.15,0.47,1.5,1.12,0.03,">1 nonsynonymous","N40H D68L",2
"lib1","SARS-CoV-2","GAAGCTGACGTGAGAC",1,3.21,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GAAGCTGATGTAAAAT",2,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134V I142L",2
"lib1","SARS-CoV-2","GAAGCTGCACGTGAAA",3,38.25,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","Y93D G116D S147F",3
"lib1","SARS-CoV-2","GAAGCTGCGTCTGATC",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I N58I",2
"lib1","SARS-CoV-2","GAAGCTGGAGGATCGA",1,35.73,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","G51T T63A F70G D98Y P133S",5
"lib1","SARS-CoV-2","GAAGCTGGATGTACCT",3,22.95,10.52,-0.25,0.07,2.86,1.08,0,">1 nonsynonymous","F44G F160H",2
"lib1","SARS-CoV-2","GAAGCTGGCAGTCGAT",1,44.31,10.79,0.03,0.08,2.97,1,0,">1 nonsynonymous","F134M T201V",2
"lib1","SARS-CoV-2","GAAGCTGTATCCGTAC",9,231.05,10.14,-0.62,0.04,2.78,1.01,0,">1 nonsynonymous","Y91V T201I",2
"lib1","SARS-CoV-2","GAAGCTGTCAGAAACG",13,229.42,10.81,0.05,0.08,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAGCTGTTTCTGCTA",4,38.41,9.73,-1.04,0.13,2.24,1.06,0.01,">1 nonsynonymous","A81S D90Y N151D",3
"lib1","SARS-CoV-2","GAAGCTTAAATAACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S Y50I S139I Y175F V182Y",5
"lib1","SARS-CoV-2","GAAGCTTAAGGAACAG",1,31.82,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","E10Q V37S T100N D112H",4
"lib1","SARS-CoV-2","GAAGCTTAATGATCAG",3,26.66,10.15,-0.62,0.05,2.98,1.03,0,">1 nonsynonymous","I2N G9M C31A K87I S129E",5
"lib1","SARS-CoV-2","GAAGCTTCAGAAACGT",4,44.84,10.47,-0.29,0.03,2.87,1.05,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","GAAGCTTCGTCTTTGG",4,91.37,9.45,-1.31,0.06,2.85,1.08,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","GAAGCTTGAGGTTAAG",8,103.83,10.26,-0.5,0.05,2.74,1.03,0,">1 nonsynonymous","I2S F62T A81V K198M",4
"lib1","SARS-CoV-2","GAAGCTTTTAGATAGT",3,40.59,10.65,-0.11,0.04,2.9,1.09,0,">1 nonsynonymous","A33F E141S",2
"lib1","SARS-CoV-2","GAAGCTTTTGATGCCA",4,35.27,7,-3.76,0.25,1.5,1.07,0.01,">1 nonsynonymous","I2V R16W L57K L162E",4
"lib1","SARS-CoV-2","GAAGGAAAACTTAAAT",1,11.03,6,-4.76,1.69,1.5,1.24,0.03,">1 nonsynonymous","F17R F134I C158P",3
"lib1","SARS-CoV-2","GAAGGAACTGTTATAT",2,23.45,9.37,-1.39,0.41,1.5,1,0.08,">1 nonsynonymous","S69K Y91V S129M Y143L F156V",5
"lib1","SARS-CoV-2","GAAGGAAGAACAGAAA",6,1.41,NA,NA,NA,NA,NA,NA,"stop","L5R E10* D90P",3
"lib1","SARS-CoV-2","GAAGGAAGTAGACAAG",1,30.16,10.79,0.02,0.05,2.94,1,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","GAAGGAAGTATGGAGT",3,42.03,10.77,0,0.06,2.96,1.02,0,">1 nonsynonymous","I142M S147V",2
"lib1","SARS-CoV-2","GAAGGAATATCACCGG",7,79.77,10.48,-0.28,0.05,2.85,1.04,0,">1 nonsynonymous","E141D G174W",2
"lib1","SARS-CoV-2","GAAGGAATCAATAACG",5,628.35,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61K A145M F160T G172L",4
"lib1","SARS-CoV-2","GAAGGAATGAAGTAAA",11,38.94,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51W V182T",2
"lib1","SARS-CoV-2","GAAGGACAATATTTAT",6,141.98,10.71,-0.05,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGGACAATTTCTCC",3,117.75,10.22,-0.55,0.07,2.74,1,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","GAAGGACATTATAGTA",6,83.15,10.36,-0.41,0.05,2.78,1.03,0,">1 nonsynonymous","N13L T201Y",2
"lib1","SARS-CoV-2","GAAGGACCACAAAACT",4,121.79,9.61,-1.15,0.05,2.83,1.08,0,">1 nonsynonymous","Y119T T201M",2
"lib1","SARS-CoV-2","GAAGGACCGCTCCATT",2,52.98,10.78,0.01,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGGACCTCCGTCCA",4,7.82,6.87,-3.89,0.27,3,1.13,0.01,">1 nonsynonymous","T15C T85L R136T P149Y",4
"lib1","SARS-CoV-2","GAAGGACCTGTAATAA",3,37.15,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T46P T63D D98K Q176S",4
"lib1","SARS-CoV-2","GAAGGACGTACACATT",5,67.01,6.36,-4.4,0.54,1.5,1.1,0.02,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","GAAGGACTAAGCGAAA",8,73.21,6.13,-4.63,0.58,1.5,1.16,0.01,">1 nonsynonymous","W106G N171P",2
"lib1","SARS-CoV-2","GAAGGACTGCCGGAAA",1,19.45,10.31,-0.46,0.15,2.6,1,0.01,">1 nonsynonymous","Y123I A190S",2
"lib1","SARS-CoV-2","GAAGGACTTATCCCCC",1,73.11,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A42R P177I",2
"lib1","SARS-CoV-2","GAAGGAGAGATGTTGA",2,93.22,9.61,-1.15,0.05,2.79,1.1,0,">1 nonsynonymous","E10Q Y119F",2
"lib1","SARS-CoV-2","GAAGGAGAGGAGGAAA",2,18.52,10.54,-0.23,0.07,2.88,1.09,0,">1 nonsynonymous","D97L S184A",2
"lib1","SARS-CoV-2","GAAGGATACTGCTCTC",2,34.56,6.56,-4.2,0.38,1.5,1.2,0.01,">1 nonsynonymous","V37L C49Y R78L F156N",4
"lib1","SARS-CoV-2","GAAGGATAGACCCCAA",4,42.21,8.75,-2.01,0.19,1.5,1.1,0.02,">1 nonsynonymous","F17L C31K S45Q",3
"lib1","SARS-CoV-2","GAAGGATATGAAAGCT",3,42.37,10.67,-0.09,0.06,2.89,1.06,0,"1 nonsynonymous","P149N",1
"lib1","SARS-CoV-2","GAAGGATATGAAGAAC",6,88.19,10.71,-0.06,0.08,2.88,1.07,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","GAAGGATCTTGCGTCA",2,29.84,6.07,-4.7,0.67,1.5,1.18,0.01,">1 nonsynonymous","I2T Q84V K128Y P133K P149V F156H P169S",7
"lib1","SARS-CoV-2","GAAGGATGTAGCGCGA",2,45.65,10.01,-0.75,0.09,1.97,1.03,0,">1 nonsynonymous","I104C P133T",2
"lib1","SARS-CoV-2","GAAGGCAACAACCGGA",5,33.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E76L P96N E154R",3
"lib1","SARS-CoV-2","GAAGGCAATTATAGAG",4,27.81,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K94T T201E",2
"lib1","SARS-CoV-2","GAAGGCACCAATAAAA",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M C61F Y175A",3
"lib1","SARS-CoV-2","GAAGGCACTAAGCAGG",3,38.67,9.65,-1.12,0.06,2.83,1.05,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","GAAGGCAGAATGAAAT",7,61.33,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16G N92L D98N Q168T",4
"lib1","SARS-CoV-2","GAAGGCCTAATTCGAA",1,87.03,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G172Y L188F",2
"lib1","SARS-CoV-2","GAAGGCGAGCATACTT",7,123.01,8.84,-1.92,0.12,1.55,1.13,0.01,"1 nonsynonymous","G86C",1
"lib1","SARS-CoV-2","GAAGGCGTAAGATGCC",8,24.35,6,-4.76,1.41,3,1.1,0,">1 nonsynonymous","S19R A105G I138P",3
"lib1","SARS-CoV-2","GAAGGCGTATTCGATG",4,21.24,6.87,-3.9,0.36,1.66,1.1,0.02,">1 nonsynonymous","F44T I72W Y91N A105G Y119L G152T",6
"lib1","SARS-CoV-2","GAAGGCTACGAACAAG",7,82.04,7.39,-3.37,0.29,1.5,1.13,0.02,">1 nonsynonymous","S19E N30F",2
"lib1","SARS-CoV-2","GAAGGCTAGGCTACCA",2,20.12,9.12,-1.64,0.22,1.5,1.1,0.02,">1 nonsynonymous","G86S E141V",2
"lib1","SARS-CoV-2","GAAGGCTCCAACAGAC",3,5.46,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","C158F A190S",2
"lib1","SARS-CoV-2","GAAGGCTTCAATTAAT",1,9.11,9.62,-1.14,0.23,2.69,1.14,0.01,">1 nonsynonymous","C6V Y39H",2
"lib1","SARS-CoV-2","GAAGGGAGACTTAATA",10,23.15,6,-4.76,2,1.79,1.18,0.03,">1 nonsynonymous","T15Y K56Q V77F I142T G155S",5
"lib1","SARS-CoV-2","GAAGGGATCTTTAAAA",5,30.96,10.78,0.02,0.06,2.95,1.01,0,"1 nonsynonymous","P149N",1
"lib1","SARS-CoV-2","GAAGGGATTACAAATA",7,33.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F17A V103A",2
"lib1","SARS-CoV-2","GAAGGGCAATGAATGC",2,29.51,9,-1.77,0.09,2.42,1.09,0,">1 nonsynonymous","N40I F62Y K87N K128Y",4
"lib1","SARS-CoV-2","GAAGGGCGTCCGCCAC",8,93.16,10.37,-0.39,0.05,2.89,1,0,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","GAAGGGCTGGAAGTTT",8,67.83,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D59M L95G Y121G Y159L",4
"lib1","SARS-CoV-2","GAAGGGGGACTCCTTT",7,78.09,10.75,-0.01,0.04,2.91,1.03,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","GAAGGGGGGGCAAGAA",4,38.39,6.06,-4.7,0.93,1.5,1.19,0.02,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","GAAGGGGTGTAATTAC",2,24.42,6.86,-3.9,0.54,2.09,1.2,0.07,">1 nonsynonymous","W106E F167Y",2
"lib1","SARS-CoV-2","GAAGGGGTTGCTAAAA",10,101.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5W G146T G172M",3
"lib1","SARS-CoV-2","GAAGGGTAGACTGAAG",3,15.73,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2S N13I F44M K87C",4
"lib1","SARS-CoV-2","GAAGGTAAAGGACAGG",3,32.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F12A G116E F134I C158K K199I",5
"lib1","SARS-CoV-2","GAAGGTAAATTCCCGC",2,31.01,10.84,0.07,0.09,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGGTAAGAAGCGGT",5,24.48,6.04,-4.73,1.45,1.5,1.17,0.03,">1 nonsynonymous","C6S K94I D112L L131S Q168T",5
"lib1","SARS-CoV-2","GAAGGTACTGCCATAA",1,30.54,9.36,-1.41,0.13,1.8,1.05,0.01,">1 nonsynonymous","V37D G86D",2
"lib1","SARS-CoV-2","GAAGGTAGGCCGAGGG",4,39.51,6.24,-4.53,0.74,1.5,1.2,0.02,">1 nonsynonymous","T85K C158W",2
"lib1","SARS-CoV-2","GAAGGTATAGAGAAAT",5,25.24,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y35S C158M V173R K199S",4
"lib1","SARS-CoV-2","GAAGGTATCCAAAGCC",10,242.49,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","I28C N40H K87N Y175E",4
"lib1","SARS-CoV-2","GAAGGTCAAGGTGATT",2,37.71,10.14,-0.62,0.08,2.87,1,0,"1 nonsynonymous","L57S",1
"lib1","SARS-CoV-2","GAAGGTCACATAGATT",3,5.76,NA,NA,NA,NA,NA,NA,"stop","K56* W106S G174D",3
"lib1","SARS-CoV-2","GAAGGTCACGAGAAAT",22,287.16,6.16,-4.61,0.48,1.5,1.19,0.01,">1 nonsynonymous","I142A C158N",2
"lib1","SARS-CoV-2","GAAGGTCATGAATATG",2,18.18,10.59,-0.18,0.09,2.89,1.11,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","GAAGGTCCAAACCCCT",4,22.35,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D34K K94P P149R A190G",4
"lib1","SARS-CoV-2","GAAGGTCCCATCGTAT",9,2.75,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","GAAGGTGAGGTAGTCG",2,41.71,10.51,-0.25,0.06,2.94,1,0,">1 nonsynonymous","E10K V115R",2
"lib1","SARS-CoV-2","GAAGGTGTTTCAAGAG",8,36.55,7.18,-3.59,0.47,1.5,1.23,0.07,">1 nonsynonymous","V20L P169L",2
"lib1","SARS-CoV-2","GAAGGTTAATAGAATA",3,107.38,10.78,0.02,0.06,2.94,1.05,0,">1 nonsynonymous","N4K I104Y",2
"lib1","SARS-CoV-2","GAAGGTTATCCCGGAC",1,1,NA,NA,NA,NA,NA,NA,"stop","N92* C150L",2
"lib1","SARS-CoV-2","GAAGGTTCAGCTTGTT",4,2.72,NA,NA,NA,NA,NA,NA,"stop","P7F D112* N130K P149E L162S",5
"lib1","SARS-CoV-2","GAAGGTTCGAAAAGAC",2,17.21,10.7,-0.07,0.05,2.98,1,0,">1 nonsynonymous","T140S S184V",2
"lib1","SARS-CoV-2","GAAGGTTCTTCTTCCG",8,72.85,10.81,0.04,0.06,2.95,1.02,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","GAAGGTTGAGCGACAG",3,5.49,NA,NA,NA,NA,NA,NA,"stop","P7H Q163*",2
"lib1","SARS-CoV-2","GAAGGTTTCTTCGGCG",1,12.93,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","C61R W106E R136S G146C",4
"lib1","SARS-CoV-2","GAAGTAAAAAATCCTA",1,0.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","GAAGTAAAACCAAGAG",5,99.2,8.34,-2.43,0.2,1.86,1.2,0.01,">1 nonsynonymous","Q176W P191H",2
"lib1","SARS-CoV-2","GAAGTAAAATTGCGGA",3,48.04,6.39,-4.38,0.6,1.5,1.16,0.03,">1 nonsynonymous","F12S P133S P149R C195V",4
"lib1","SARS-CoV-2","GAAGTAAACCACAAGT",2,70.65,10.68,-0.08,0.05,2.96,1.04,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","GAAGTAAACCATACAG",12,218.63,10.72,-0.04,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGTAAATCTGTATC",2,25.78,10.47,-0.29,0.08,2.78,1.12,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","GAAGTAAATTACTTAG",3,59.93,6.1,-4.66,0.54,1.5,1.09,0.01,">1 nonsynonymous","R25M C61P D97V E141W",4
"lib1","SARS-CoV-2","GAAGTAACCAACAGGT",3,44.64,10.78,0.01,0.08,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAAGTAACCCAACTAT",1,16.46,9.22,-1.54,0.16,2.63,1.24,0.02,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GAAGTAACTCATAGTA",6,26.38,7.08,-3.68,0.35,1.5,1.1,0.03,">1 nonsynonymous","C61A V103S T201N",3
"lib1","SARS-CoV-2","GAAGTAAGCAAAGTCA",2,18.87,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2P I72Y R136I",3
"lib1","SARS-CoV-2","GAAGTAAGCAATTTAC",3,75.91,6.93,-3.83,0.25,1.5,1.15,0.01,">1 nonsynonymous","R25G S43R N107R",3
"lib1","SARS-CoV-2","GAAGTAAGTTGCAGAA",2,2.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","GAAGTAATACGCAGTG",3,169.68,10.51,-0.26,0.04,2.92,1,0,">1 nonsynonymous","G152A F160M",2
"lib1","SARS-CoV-2","GAAGTAATCTTACTTG",8,3.36,NA,NA,NA,NA,NA,NA,"stop","R73K F99* Q176E",3
"lib1","SARS-CoV-2","GAAGTAATGTTCAAAA",7,59.56,10.22,-0.54,0.05,2.92,1.03,0,">1 nonsynonymous","V32A T63K G116I",3
"lib1","SARS-CoV-2","GAAGTACAACCGAACT",6,107.05,10.68,-0.09,0.07,2.88,1.08,0,">1 nonsynonymous","L5F S200F",2
"lib1","SARS-CoV-2","GAAGTACACAGATACA",7,63.14,9.55,-1.21,0.21,1.5,1.01,0.02,">1 nonsynonymous","A105G V173S",2
"lib1","SARS-CoV-2","GAAGTACAGAAAAACC",3,38.86,8.65,-2.11,0.19,1.5,1.09,0.02,">1 nonsynonymous","T15S F47N V115C",3
"lib1","SARS-CoV-2","GAAGTACCCTTCTAAC",1,1.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99D",1
"lib1","SARS-CoV-2","GAAGTAGACCTAATTG",4,86.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L60V F167P K199S",3
"lib1","SARS-CoV-2","GAAGTAGCTAAATAAA",1,12.67,7.07,-3.7,0.19,2.16,1.17,0.01,">1 nonsynonymous","K56H C150A",2
"lib1","SARS-CoV-2","GAAGTAGGCTGTTTAA",1,47.59,9.87,-0.89,0.1,2.61,1.03,0,">1 nonsynonymous","F8C F44W",2
"lib1","SARS-CoV-2","GAAGTAGGTAAAATCG",3,1.19,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib1","SARS-CoV-2","GAAGTAGTTAAGAGAA",1,20.09,10.31,-0.45,0.08,2.94,1,0,">1 nonsynonymous","A14T K87I N171Q",3
"lib1","SARS-CoV-2","GAAGTATAAAAAATGG",7,58.88,10.67,-0.09,0.04,2.97,1.01,0,">1 nonsynonymous","V32D S41Y",2
"lib1","SARS-CoV-2","GAAGTATACGGGTTTT",2,25.77,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C6G A105L",2
"lib1","SARS-CoV-2","GAAGTATGAAAAAGCT",6,159.51,10.36,-0.4,0.04,2.9,1.03,0,">1 nonsynonymous","R78G Y121L K128S",3
"lib1","SARS-CoV-2","GAAGTATGAGCCGAAA",2,37.77,10.78,0.02,0.06,3,1,0,">1 nonsynonymous","L5A S36G",2
"lib1","SARS-CoV-2","GAAGTATGTATGTTGT",3,43.78,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D90N P96H P161Q",3
"lib1","SARS-CoV-2","GAAGTATTAGTAGCAC",2,11.37,9.61,-1.15,0.31,1.63,1.24,0.04,">1 nonsynonymous","K56S A105N",2
"lib1","SARS-CoV-2","GAAGTATTCATGACCC",4,0.7,NA,NA,NA,NA,NA,NA,"stop","I80E G166*",2
"lib1","SARS-CoV-2","GAAGTATTGAGTTAAA",6,38.15,6,-4.76,1.04,1.5,1.18,0.02,">1 nonsynonymous","G51D D90Y G155C Y175T T193S T201Q",6
"lib1","SARS-CoV-2","GAAGTCAAAAACGATA",6,38.1,10.07,-0.69,0.12,2.18,1.06,0.01,">1 nonsynonymous","A33L P96Y L122K",3
"lib1","SARS-CoV-2","GAAGTCAAAATAACAC",5,59.76,10.57,-0.19,0.05,2.89,1.01,0,">1 nonsynonymous","S41R L60T L122S P149R",4
"lib1","SARS-CoV-2","GAAGTCAAGGTATAAA",5,105.18,9.96,-0.81,0.1,2.26,1.03,0,">1 nonsynonymous","A42L G51D D59K",3
"lib1","SARS-CoV-2","GAAGTCAATCTCGTCA",5,25.89,10.85,0.09,0.08,2.93,1.01,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","GAAGTCACAAGGCGTG",5,28.84,9.82,-0.94,0.21,1.97,1.06,0.05,">1 nonsynonymous","T15K N24L",2
"lib1","SARS-CoV-2","GAAGTCACCAGTAGAG",2,11.13,7.09,-3.67,0.75,1.5,1.19,0.01,">1 nonsynonymous","T100S G152D P161C",3
"lib1","SARS-CoV-2","GAAGTCACTTTTATCG",2,59.41,10.57,-0.19,0.06,2.82,1.05,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","GAAGTCAGAAAACACC",1,27.17,10.83,0.06,0.09,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGTCATACGACTTG",6,76.94,9.87,-0.9,0.09,2.05,1.05,0,">1 nonsynonymous","I104S E141R",2
"lib1","SARS-CoV-2","GAAGTCATCTTCAGGG",2,102.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G51L F167L P177K L183V",4
"lib1","SARS-CoV-2","GAAGTCCCCCATACTA",2,42.26,9.91,-0.85,0.09,2.19,1.04,0,"1 nonsynonymous","F99H",1
"lib1","SARS-CoV-2","GAAGTCCGCAGCCTAA",1,2.85,NA,NA,NA,NA,NA,NA,"stop","V37I V52R G83* P96N Y178C V180R",6
"lib1","SARS-CoV-2","GAAGTCCTAAGTCTTG",8,79.79,6.17,-4.59,0.6,1.5,1.2,0.01,">1 nonsynonymous","V11C G83Q D98N F126S",4
"lib1","SARS-CoV-2","GAAGTCCTTTTCACAT",4,31.84,6,-4.76,1.53,1.5,1.16,0.02,">1 nonsynonymous","D90P P149A",2
"lib1","SARS-CoV-2","GAAGTCGACTAAAAAG",4,82.56,10.49,-0.27,0.05,2.86,1.03,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","GAAGTCGGCACCTTAA",1,6.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8G Y35R C61K Y93S T100S W106Y N107K G174A",8
"lib1","SARS-CoV-2","GAAGTCGGCTAAAATC",2,7.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6K V11L Y50H Q144E",4
"lib1","SARS-CoV-2","GAAGTCGTGAATACAA",1,15.88,6.31,-4.45,1.1,1.5,1.19,0.06,">1 nonsynonymous","V11L P54M D98L F167V",4
"lib1","SARS-CoV-2","GAAGTCTAGGGCGGTA",3,9.83,6.31,-4.45,0.61,1.5,1.12,0.02,">1 nonsynonymous","D98V P161R",2
"lib1","SARS-CoV-2","GAAGTCTCAATATCAG",2,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P R16P T55Y R73Q G146P P169R",6
"lib1","SARS-CoV-2","GAAGTCTCTAATACAT",7,23.1,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S41L F99C Y143D V173L",4
"lib1","SARS-CoV-2","GAAGTCTGATTATTAA",2,80.71,10.69,-0.07,0.07,2.91,1.07,0,">1 nonsynonymous","T3S Q144N",2
"lib1","SARS-CoV-2","GAAGTCTTAGTTAGAC",1,33.06,9.19,-1.57,0.08,2.77,1.05,0,">1 nonsynonymous","L111I N118P",2
"lib1","SARS-CoV-2","GAAGTCTTATACCAAA",4,31.8,8.3,-2.47,0.13,1.8,1.05,0.01,">1 nonsynonymous","I142R F185I",2
"lib1","SARS-CoV-2","GAAGTCTTCAGCACAC",1,22.81,10.14,-0.62,0.11,2.49,1.05,0.01,">1 nonsynonymous","F12I R136L",2
"lib1","SARS-CoV-2","GAAGTGAAGAACCAGA",2,15.56,9.01,-1.75,0.24,1.8,1.17,0.02,">1 nonsynonymous","K26R L57T G152W T201R",4
"lib1","SARS-CoV-2","GAAGTGAGCGATATTA",2,80.3,10.62,-0.14,0.05,2.87,1.05,0,">1 nonsynonymous","R27G K199A",2
"lib1","SARS-CoV-2","GAAGTGATCTAAGTGC",8,76.82,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","L5K L60R A89D",3
"lib1","SARS-CoV-2","GAAGTGCAATATTCAG",1,38.84,10.81,0.04,0.09,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAAGTGCATATGCATT",1,6.01,9.42,-1.34,0.18,2.75,1.22,0.01,">1 nonsynonymous","N92Y Y143I",2
"lib1","SARS-CoV-2","GAAGTGCGATTAAGGC",10,44.88,6.08,-4.69,0.88,1.5,1.17,0.02,">1 nonsynonymous","C49S K87G V173L",3
"lib1","SARS-CoV-2","GAAGTGGACATTTCCA",3,63.27,10.24,-0.53,0.09,2.71,1,0,"1 nonsynonymous","N40I",1
"lib1","SARS-CoV-2","GAAGTGGGGCACGATC",3,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P V181R",2
"lib1","SARS-CoV-2","GAAGTGGGTATACATA",7,1.09,NA,NA,NA,NA,NA,NA,"stop","C49D A67G G101*",3
"lib1","SARS-CoV-2","GAAGTGGTGGGCAATT",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P D59F I80A Q84H L125P",5
"lib1","SARS-CoV-2","GAAGTGGTTAGCACCG",6,65.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9I R27M P177T",3
"lib1","SARS-CoV-2","GAAGTGTATAGTATGC",3,58.52,10.59,-0.17,0.07,2.88,1.06,0,">1 nonsynonymous","A42G N110M",2
"lib1","SARS-CoV-2","GAAGTGTTCTATTATG",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114E R124S R136Y T201L",4
"lib1","SARS-CoV-2","GAAGTGTTGTAGCTTA",2,17.8,10.79,0.03,0.18,2.84,1.03,0.02,">1 nonsynonymous","L5W D98P",2
"lib1","SARS-CoV-2","GAAGTTAACACTACAG",1,29.34,10.67,-0.09,0.05,3,1,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","GAAGTTAACTCTCTAC",1,20.15,10.47,-0.3,0.12,2.94,1,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","GAAGTTAAGATGCTGT",3,40.96,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K56H P177R",2
"lib1","SARS-CoV-2","GAAGTTACACATCGGG",2,15.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3H I72G",2
"lib1","SARS-CoV-2","GAAGTTACGTGTTCAG",2,39.74,10.45,-0.31,0.07,2.95,1,0,"1 nonsynonymous","I142H",1
"lib1","SARS-CoV-2","GAAGTTAGGGTATATT",1,7.3,10.89,0.12,0.12,3,1,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","GAAGTTATACACAAGC",3,45.91,9.45,-1.32,0.13,2.61,1.21,0.01,">1 nonsynonymous","E135H F156R L183I",3
"lib1","SARS-CoV-2","GAAGTTATCTGCATGC",3,37.65,6,-4.76,0.73,3,1.12,0.01,">1 nonsynonymous","F62R N110Y D137S",3
"lib1","SARS-CoV-2","GAAGTTATGACGGAGC",1,10.44,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5K N30R S41R P54Y A145V G146W T148N",7
"lib1","SARS-CoV-2","GAAGTTATTGCCGTTG",2,15.81,10.14,-0.62,0.11,2.74,1,0.01,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","GAAGTTCAAAAACAGT",6,52.65,6,-4.76,0.47,1.5,1.1,0.01,">1 nonsynonymous","G9V T100P G174S K199G",4
"lib1","SARS-CoV-2","GAAGTTCAAAGAAATA",2,2.22,NA,NA,NA,NA,NA,NA,"stop","D90K W106L G146R C158* S200Y",5
"lib1","SARS-CoV-2","GAAGTTCAACAAGGAG",3,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N D34T N58M A89T P149H Q168S",6
"lib1","SARS-CoV-2","GAAGTTCAACACTAAC",6,54.84,8.92,-1.85,0.28,1.5,1.02,0.03,">1 nonsynonymous","C6Y A81H S200P",3
"lib1","SARS-CoV-2","GAAGTTCACTTTTCGC",4,0.23,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","GAAGTTCATCCAGTCC",2,23.99,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R124Y N157L",2
"lib1","SARS-CoV-2","GAAGTTCCGCCTCAAG",5,22.91,10.94,0.18,0.11,2.82,1.1,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","GAAGTTCGAGGATGAT",4,26.49,8.79,-1.98,0.29,1.5,1,0.02,">1 nonsynonymous","V11R R27W T140R L187S",4
"lib1","SARS-CoV-2","GAAGTTCTGCCCAAAG",4,18.65,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N40Y T100L W106R Y119S Q176R",5
"lib1","SARS-CoV-2","GAAGTTGATTACCTAA",5,33.19,6.66,-4.11,0.69,1.5,1.14,0.07,">1 nonsynonymous","C6D D34V G117D R179S",4
"lib1","SARS-CoV-2","GAAGTTGGACATAGGA",3,47.16,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P7T K26E F44S W106P N120V",5
"lib1","SARS-CoV-2","GAAGTTGTAATCCCAA",5,116.9,10.24,-0.52,0.04,2.8,1.02,0,"1 nonsynonymous","L57N",1
"lib1","SARS-CoV-2","GAAGTTGTAGTTCTTC",6,152.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R73T D90G L162R F167L",4
"lib1","SARS-CoV-2","GAAGTTGTGGGTTGTA",4,8.15,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","V71W",1
"lib1","SARS-CoV-2","GAAGTTTATGAAGCAG",9,148.57,8.81,-1.96,0.08,2.62,1.12,0,">1 nonsynonymous","T55E N120Y Q144S G155C",4
"lib1","SARS-CoV-2","GAAGTTTCAGAAACCA",2,65.78,10.58,-0.18,0.05,2.89,1.08,0,">1 nonsynonymous","S53V L60K",2
"lib1","SARS-CoV-2","GAAGTTTCCTAGGAAC",2,58.07,9.77,-0.99,0.11,2.4,1.03,0.01,">1 nonsynonymous","A14S C61F G155R L187H",4
"lib1","SARS-CoV-2","GAAGTTTGACAATGGT",1,38.91,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N30Q I80P G83L P133L",4
"lib1","SARS-CoV-2","GAAGTTTGATACCATG",6,50.46,6.46,-4.3,0.42,1.5,1.17,0.02,">1 nonsynonymous","V11H N24M W106T",3
"lib1","SARS-CoV-2","GAAGTTTGGTCATAAC",6,0,NA,NA,NA,NA,NA,NA,"stop","V37F V115Q Y121S F167W K199*",5
"lib1","SARS-CoV-2","GAAGTTTGTATAATGC",1,41.19,9.63,-1.13,0.08,2.8,1.05,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","GAAGTTTTAAATCAGC",2,275.69,10.69,-0.08,0.04,2.89,1.06,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","GAAGTTTTAATACTGA",6,72.62,8.51,-2.26,0.27,1.5,1.24,0.03,">1 nonsynonymous","A14S L60V C102L",3
"lib1","SARS-CoV-2","GAAGTTTTATAAATCT",1,24.91,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","P82R I88M D97Y I138D",4
"lib1","SARS-CoV-2","GAAGTTTTATTACTGA",2,126.63,10.72,-0.05,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAAAAAAACCGGA",1,29.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T K94G",2
"lib1","SARS-CoV-2","GAATAAAAAAAGAAGG",5,33.57,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L60V Y123A K128T I142S",4
"lib1","SARS-CoV-2","GAATAAAAAAGTAATA",1,12.33,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","N58Q P96Y A105V",3
"lib1","SARS-CoV-2","GAATAAAAACTAGCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","A105V L122* E154Q",3
"lib1","SARS-CoV-2","GAATAAAAACTTTAGA",7,15.36,6.3,-4.47,0.76,1.5,1.19,0.05,">1 nonsynonymous","L60A D90I V103Y K128M R179I",5
"lib1","SARS-CoV-2","GAATAAAAAGAAATAC",2,24.22,10.68,-0.09,0.07,2.89,1.01,0,">1 nonsynonymous","F62Y D97Y",2
"lib1","SARS-CoV-2","GAATAAAACAATAAGT",7,19.22,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G146L G155T F185Q",3
"lib1","SARS-CoV-2","GAATAAAACCAAAGTA",5,111.4,10.24,-0.53,0.04,2.9,1.05,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","GAATAAAAGAAGACAA",10,8.39,NA,NA,NA,NA,NA,NA,"stop","Y21* S69P C150F V173I",4
"lib1","SARS-CoV-2","GAATAAAAGAGGACGG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4F E10* C61T",3
"lib1","SARS-CoV-2","GAATAAAAGTTAGCAA",8,109.07,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","P7K K94T F134P",3
"lib1","SARS-CoV-2","GAATAAAAGTTCAAAA",1,6.11,6,-4.76,2,3,1.08,0,">1 nonsynonymous","L57F E76D P96E N120D F167S L183G",6
"lib1","SARS-CoV-2","GAATAAAAGTTGGGGG",2,84.41,9,-1.76,0.16,1.5,1.14,0.01,">1 nonsynonymous","N1I A22G Y39R Y121M",4
"lib1","SARS-CoV-2","GAATAAAATAAACCTA",5,143.14,10.77,0.01,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAAAATAGCTCGT",2,23.72,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T63N K87L L95Y V153F",4
"lib1","SARS-CoV-2","GAATAAAATCAACAAT",2,14.72,7.21,-3.56,0.53,3,1.02,0.01,">1 nonsynonymous","C49K T201L",2
"lib1","SARS-CoV-2","GAATAAAATGGCAAAA",4,57.73,6.65,-4.11,0.53,1.5,1.15,0.05,">1 nonsynonymous","F8V R78Q K87A I142T N157Y",5
"lib1","SARS-CoV-2","GAATAAAATTGGATGG",3,49.23,7.56,-3.21,0.3,1.5,1.13,0.02,">1 nonsynonymous","L5R P133T Q144C",3
"lib1","SARS-CoV-2","GAATAAACATGCTCCG",2,60.04,10.55,-0.22,0.03,2.92,1.01,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","GAATAAACATTAAGCA",2,25.39,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G101C E141I",2
"lib1","SARS-CoV-2","GAATAAACCATTTGAA",7,65.96,7.16,-3.61,0.37,1.5,1.25,0.03,">1 nonsynonymous","P96N I104S",2
"lib1","SARS-CoV-2","GAATAAACCCAAATTT",1,6.69,8.08,-2.69,0.31,1.5,1.01,0.02,">1 nonsynonymous","C6W V20M N40D P82Y G152S F167K R179W",7
"lib1","SARS-CoV-2","GAATAAACGTCAAGGA",3,25.35,7.04,-3.72,0.47,1.5,1.14,0.07,">1 nonsynonymous","A14W T85P E141P",3
"lib1","SARS-CoV-2","GAATAAACTAAACTCG",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D Y91T I104Y",3
"lib1","SARS-CoV-2","GAATAAAGACACCTAG",11,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67I Y93G",2
"lib1","SARS-CoV-2","GAATAAAGCAAACTCT",3,23.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7S V11H N64P I80T",4
"lib1","SARS-CoV-2","GAATAAAGCATTAGGC",2,29.95,6,-4.76,1.57,3,1.08,0,">1 nonsynonymous","I138M P149L C158Y",3
"lib1","SARS-CoV-2","GAATAAAGCCTCACGG",3,108.94,8.6,-2.16,0.2,1.5,1.03,0.02,">1 nonsynonymous","N30W T63Q A81D S129N",4
"lib1","SARS-CoV-2","GAATAAAGCTGAACGA",3,78.75,8.8,-1.96,0.09,2.6,1.14,0,">1 nonsynonymous","R27F F126C V173N",3
"lib1","SARS-CoV-2","GAATAAAGGACTTCCT",3,36.89,8.59,-2.17,0.12,2.72,1.12,0.01,">1 nonsynonymous","C61R S113T E154H",3
"lib1","SARS-CoV-2","GAATAAAGGCACACGG",9,100.11,10.25,-0.51,0.1,2.72,1.02,0,">1 nonsynonymous","F62S D97W",2
"lib1","SARS-CoV-2","GAATAAAGGCTTCTAT",3,23.6,10.74,-0.03,0.1,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAAAGTTGACATG",9,142.23,8.47,-2.29,0.15,1.87,1.13,0.01,">1 nonsynonymous","C6W R73T",2
"lib1","SARS-CoV-2","GAATAAATAAATAAAT",2,1.84,NA,NA,NA,NA,NA,NA,"stop","Y143* P197M",2
"lib1","SARS-CoV-2","GAATAAATAATGAGAA",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F99C V103R",3
"lib1","SARS-CoV-2","GAATAAATAGTTGGAG",1,39.27,10.77,0,0.06,2.91,1.06,0,"1 nonsynonymous","Y39S",1
"lib1","SARS-CoV-2","GAATAAATCAGCCGCC",4,89.34,10.63,-0.13,0.04,2.89,1.05,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","GAATAAATCTACTGTA",1,62.91,10.71,-0.06,0.05,2.93,1.04,0,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","GAATAAATCTTACACA",6,53.6,8.39,-2.38,0.22,1.5,1.05,0.02,">1 nonsynonymous","F12G S129Y F134L",3
"lib1","SARS-CoV-2","GAATAAATGAGTAGAG",4,22.79,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L38P E76M A89S G101Y T140N",5
"lib1","SARS-CoV-2","GAATAAATGCAACGAT",1,8.45,10.86,0.09,0.14,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAAATGTTCAAAA",1,51.99,10.77,0.01,0.06,2.92,1.03,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","GAATAAATTGCCTCAT",2,79.95,8.26,-2.51,0.17,1.95,1.13,0.01,">1 nonsynonymous","L5M D112M",2
"lib1","SARS-CoV-2","GAATAACAAAAACCAC",2,125.99,9.67,-1.1,0.12,2.35,1.06,0.01,">1 nonsynonymous","V37D R179K",2
"lib1","SARS-CoV-2","GAATAACAACAATCAA",8,20.85,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","A67R F134N",2
"lib1","SARS-CoV-2","GAATAACACCATAACT",1,36.92,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86F N130M R136G",3
"lib1","SARS-CoV-2","GAATAACACCCTATAG",1,9.75,9.73,-1.04,0.29,2.11,1.14,0.05,">1 nonsynonymous","Y123K P133C Q168S",3
"lib1","SARS-CoV-2","GAATAACACGAACCCA",3,76.37,10.2,-0.56,0.04,2.81,1.06,0,">1 nonsynonymous","N13S N120R S147K",3
"lib1","SARS-CoV-2","GAATAACAGTGTTGCA",6,11.55,9.61,-1.15,0.21,2.64,1.17,0.02,">1 nonsynonymous","T3P S45M T140K",3
"lib1","SARS-CoV-2","GAATAACATATATTTC",3,6.08,10.88,0.12,0.09,2.98,1,0,">1 nonsynonymous","S19P T55I L111I",3
"lib1","SARS-CoV-2","GAATAACATCACGAAG",6,72.31,10.43,-0.34,0.05,2.95,1.06,0,">1 nonsynonymous","P7E I72L K87T",3
"lib1","SARS-CoV-2","GAATAACCAAGTTTAC",3,25.78,6.29,-4.48,0.91,1.5,1.27,0.05,">1 nonsynonymous","N40T N92M T100V",3
"lib1","SARS-CoV-2","GAATAACCAATGAAAG",6,45.06,9.29,-1.48,0.34,1.5,1,0.05,">1 nonsynonymous","C31N C49K G83F E141N F167G",5
"lib1","SARS-CoV-2","GAATAACCATAGATAA",7,153.27,10.2,-0.57,0.08,2.46,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAACCCCGCAGTA",2,0.62,NA,NA,NA,NA,NA,NA,"stop","V52Q I88*",2
"lib1","SARS-CoV-2","GAATAACCCTTAAAGT",1,9.51,10.36,-0.41,0.08,2.98,1,0,">1 nonsynonymous","N4V K87N N151M",3
"lib1","SARS-CoV-2","GAATAACGAAAATATA",3,35.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99E Y159L",2
"lib1","SARS-CoV-2","GAATAACGCTCGAACC",7,2.94,NA,NA,NA,NA,NA,NA,"stop","T3R S41* C61R N120D",4
"lib1","SARS-CoV-2","GAATAACGGCCTCATT",8,81.62,9.91,-0.86,0.07,2.64,1.05,0,">1 nonsynonymous","F134E P169R",2
"lib1","SARS-CoV-2","GAATAACGTACTGTTA",1,8.95,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Q84M I104K R127I",3
"lib1","SARS-CoV-2","GAATAACTACAAATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F12T S19* I28V",3
"lib1","SARS-CoV-2","GAATAACTGCACCATA",4,110.48,10.69,-0.08,0.05,2.86,1.1,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","GAATAAGAACTGGTCT",4,17.79,10.62,-0.14,0.29,2.55,1.13,0.06,">1 nonsynonymous","N24S S53Y Y91L T201K",4
"lib1","SARS-CoV-2","GAATAAGAATTTGATA",2,10.51,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W23K C61G V115R G146F V182Y",5
"lib1","SARS-CoV-2","GAATAAGACAAAGTAA",8,98.2,8.74,-2.02,0.11,2.67,1.11,0,">1 nonsynonymous","N64G A81S Y119R T170S",4
"lib1","SARS-CoV-2","GAATAAGCAATGACAG",1,21.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10R V20L V37F D98L",4
"lib1","SARS-CoV-2","GAATAAGCAGAATAGA",5,62.8,9.33,-1.43,0.07,2.73,1.12,0,">1 nonsynonymous","C6G K87S T100C S129K",4
"lib1","SARS-CoV-2","GAATAAGCCGATATTT",2,12.21,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A89L L95D T148L",3
"lib1","SARS-CoV-2","GAATAAGCGAACCTAA",3,58.05,10.44,-0.33,0.07,2.76,1.03,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","GAATAAGCGAGACCAG",2,8.26,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","V37L G51S R73K D137S T148V",5
"lib1","SARS-CoV-2","GAATAAGCGAGTCCAA",7,105.36,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","D68R W106E Y119S P149S",4
"lib1","SARS-CoV-2","GAATAAGCGATTTAGC",2,40.3,8.25,-2.51,0.1,2.66,1.05,0,">1 nonsynonymous","Q144C C158W",2
"lib1","SARS-CoV-2","GAATAAGCGTAGAGAT",1,5.23,9.82,-0.94,0.25,1.77,1.33,0.02,">1 nonsynonymous","L5S Y91V D97P K198I",4
"lib1","SARS-CoV-2","GAATAAGCTTCCAGTC",5,64.49,10.69,-0.07,0.06,2.87,1.05,0,">1 nonsynonymous","L5E N58S P149E",3
"lib1","SARS-CoV-2","GAATAAGGGTCGTTCC",9,90.64,8.71,-2.06,0.12,2.33,1.16,0.01,">1 nonsynonymous","Y35G V77L K128G G174R",4
"lib1","SARS-CoV-2","GAATAAGGTATAAATA",1,16.14,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V20G T63S F185T",3
"lib1","SARS-CoV-2","GAATAAGTACTGGATA",6,148.14,10.16,-0.6,0.05,2.82,1.01,0,"1 nonsynonymous","Y91A",1
"lib1","SARS-CoV-2","GAATAAGTAGAAATGT",5,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y S41M",2
"lib1","SARS-CoV-2","GAATAAGTCAATTCGA",3,80.94,10.35,-0.41,0.05,2.94,1.01,0,">1 nonsynonymous","A14R C61S",2
"lib1","SARS-CoV-2","GAATAAGTCCACAAAG",1,24.7,9.87,-0.9,0.14,2.67,1.09,0.01,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","GAATAAGTTATGGCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","GAATAAGTTCTAAGAG",6,52.76,10.76,0,0.1,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAAGTTGAAAGAA",4,27.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I28V K56M G74R Y165L",4
"lib1","SARS-CoV-2","GAATAATAAGTTGACC",2,15.13,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","A18P N107T D112Y G152A P169C",5
"lib1","SARS-CoV-2","GAATAATAGCCTCGGA",2,16.61,10.66,-0.11,0.16,2.8,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAATAATATATTGCAA",2,76.37,9.2,-1.57,0.09,2.66,1.12,0,">1 nonsynonymous","A22R N110K G117R",3
"lib1","SARS-CoV-2","GAATAATCTAACTTAC",2,5.05,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","V103M S139M C158M",3
"lib1","SARS-CoV-2","GAATAATGAACATAAC",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44N K114L L122S S129T V180R",5
"lib1","SARS-CoV-2","GAATAATGCGAAATCT",4,14.72,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9Y A33N F44A Y50W N92M T100S G174P",7
"lib1","SARS-CoV-2","GAATAATTGATTTGTG",2,0.65,NA,NA,NA,NA,NA,NA,"stop","R127* G174S",2
"lib1","SARS-CoV-2","GAATAATTTATTTGGT",5,58.43,8.64,-2.12,0.09,2.91,1.11,0,">1 nonsynonymous","D59G F126R",2
"lib1","SARS-CoV-2","GAATAATTTGAGAAGT",2,32.98,10.2,-0.56,0.08,2.83,1.08,0,">1 nonsynonymous","D90T N171S T201Y",3
"lib1","SARS-CoV-2","GAATACAAACCTCACT",1,89.91,9.5,-1.27,0.06,2.87,1.08,0,">1 nonsynonymous","A22S T170H",2
"lib1","SARS-CoV-2","GAATACAAAGAACATT",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L95T",2
"lib1","SARS-CoV-2","GAATACAAAGCGTTAG",1,11.56,10.25,-0.52,0.18,2.55,1,0.01,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","GAATACAAATACACTA",1,15.49,10.16,-0.61,0.1,2.93,1.05,0,">1 nonsynonymous","A33S S43G",2
"lib1","SARS-CoV-2","GAATACAACCCGAATC",1,9.16,10.57,-0.2,0.07,3,1.02,0,">1 nonsynonymous","N40A N120L",2
"lib1","SARS-CoV-2","GAATACACATTTCCTT",2,51.64,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N13C S36G F62A Y119N Y159K",5
"lib1","SARS-CoV-2","GAATACACCACAGACT",4,8.61,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","F8N W23L C31S F62W F99P C102L P133T C150S V182S",9
"lib1","SARS-CoV-2","GAATACACGGACTATA",8,73.02,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","R16K F44D K48G N92E S164L",5
"lib1","SARS-CoV-2","GAATACACTCAAGAAT",2,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83C F99V C102Y Y123S T148L G172C",6
"lib1","SARS-CoV-2","GAATACAGAATAAAAA",1,34.32,10.7,-0.07,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATACAGATCTAAGC",5,1.96,NA,NA,NA,NA,NA,NA,"stop","F99* A105R R136E Q144T G172S",5
"lib1","SARS-CoV-2","GAATACAGGTCATCAT",1,29.69,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C49D F167K",2
"lib1","SARS-CoV-2","GAATACAGGTCGATTT",2,10.76,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","GAATACAGGTGACCAT",1,63.31,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S43R N130A I142S C158Y",4
"lib1","SARS-CoV-2","GAATACATAACACCAC",6,60.59,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","A14I T55R G86F D137E",4
"lib1","SARS-CoV-2","GAATACATATAGTTCG",3,17.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51I D59R T100R F126W G152C P197V",6
"lib1","SARS-CoV-2","GAATACATGCTCACCG",1,37.7,10.76,0,0.06,2.9,1.04,0,">1 nonsynonymous","S41Y K48R",2
"lib1","SARS-CoV-2","GAATACCAAACCATCG",2,29.74,6.24,-4.52,0.69,1.5,1.17,0.02,">1 nonsynonymous","S36L C61R I80K L131R",4
"lib1","SARS-CoV-2","GAATACCAAAGTATAA",9,132.17,10.24,-0.52,0.03,2.92,1.02,0,">1 nonsynonymous","P7C N120Y",2
"lib1","SARS-CoV-2","GAATACCAAATTCTGT",4,1.63,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib1","SARS-CoV-2","GAATACCACTCCCAAA",4,0.27,NA,NA,NA,NA,NA,NA,"stop","N1M K56* G101N P161N",4
"lib1","SARS-CoV-2","GAATACCAGGACCTCC",1,20.89,9.76,-1,0.08,2.51,1,0,">1 nonsynonymous","Y35S D90L",2
"lib1","SARS-CoV-2","GAATACCATATGTCTA",3,102.45,10.6,-0.17,0.05,2.9,1,0,"1 nonsynonymous","I138F",1
"lib1","SARS-CoV-2","GAATACCCAAAACGTG",4,2.01,NA,NA,NA,NA,NA,NA,"stop","C6R A81G I142* E154P Y175L V180G",6
"lib1","SARS-CoV-2","GAATACCCGAGCTACG",6,41.76,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Q84K L95S I142G N171C",4
"lib1","SARS-CoV-2","GAATACCCGCACACAA",3,43.67,9.99,-0.77,0.09,2.37,1.07,0,">1 nonsynonymous","A14W P197K",2
"lib1","SARS-CoV-2","GAATACCCTAAAAATG",3,122.03,10.71,-0.05,0.09,2.92,1.06,0,"1 nonsynonymous","S36V",1
"lib1","SARS-CoV-2","GAATACCCTAAAACGG",3,50.43,10.48,-0.28,0.06,2.91,1.02,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","GAATACCGGTGCCACC",4,15.39,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","G86K L95G E135R",3
"lib1","SARS-CoV-2","GAATACCTACCGCAAA",2,2.34,NA,NA,NA,NA,NA,NA,"stop","F44R A67S S113N Y143* N171M K199Y",6
"lib1","SARS-CoV-2","GAATACGACATGCTAA",10,229.94,10.81,0.04,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATACGGCGTGCGAA",7,48.39,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9V A33G L60S R73T I88Q E141K",6
"lib1","SARS-CoV-2","GAATACGTAAATCTTA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T L95G N107H V173L",4
"lib1","SARS-CoV-2","GAATACGTTGGATAAA",5,172.96,10.73,-0.03,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATACTAAGATTAAC",2,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R S41E V52K N130G D137P Y178H",6
"lib1","SARS-CoV-2","GAATACTAAGGATAAG",2,18.74,10.53,-0.24,0.1,2.88,1.09,0,">1 nonsynonymous","G9K K56S",2
"lib1","SARS-CoV-2","GAATACTACAAAACCT",5,0.21,NA,NA,NA,NA,NA,NA,"stop","C61* L95D N120I D137E F156H",5
"lib1","SARS-CoV-2","GAATACTAGTAAGCCC",8,24.78,7.12,-3.64,0.36,1.5,1.15,0.04,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","GAATACTAGTCAATCA",2,28.88,10.64,-0.12,0.05,2.95,1.05,0,"1 nonsynonymous","P149M",1
"lib1","SARS-CoV-2","GAATACTCACCGTCAA",4,33.14,10.89,0.13,0.08,2.86,1.09,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","GAATACTCTATTGGCA",1,30.56,8.64,-2.12,0.17,1.61,1.04,0.02,">1 nonsynonymous","G51N L60C S69V P82K N120P",5
"lib1","SARS-CoV-2","GAATACTCTATTTGAT",7,67.37,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I88R W106R C195T",3
"lib1","SARS-CoV-2","GAATACTGACATTAGG",4,60.33,9.33,-1.43,0.12,1.75,1.12,0.01,">1 nonsynonymous","A14F V65G",2
"lib1","SARS-CoV-2","GAATACTGCCCATAAC",3,57.24,10.52,-0.25,0.05,2.85,1.12,0,">1 nonsynonymous","K56T P149H",2
"lib1","SARS-CoV-2","GAATACTTCAACCTTA",3,71.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D K48W Y66C F185M T201V",5
"lib1","SARS-CoV-2","GAATACTTCATTAAAC",5,108.2,8.34,-2.43,0.16,2.41,1.08,0.01,">1 nonsynonymous","T55S G146L",2
"lib1","SARS-CoV-2","GAATAGAAAAATTATT",4,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T S41Y P96Y C150S F156R",5
"lib1","SARS-CoV-2","GAATAGAAAACTTAGA",3,21.98,6,-4.76,2,1.5,1.38,0.03,">1 nonsynonymous","W23V S45C",2
"lib1","SARS-CoV-2","GAATAGAACATAACTT",8,133.12,10.15,-0.62,0.05,2.65,1,0,"1 nonsynonymous","R127H",1
"lib1","SARS-CoV-2","GAATAGAATCACTACC",16,192.05,10.78,0.02,0.08,2.85,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGAATTCATACT",6,75.25,10.6,-0.17,0.05,2.92,1.05,0,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","GAATAGACAACTGGAT",3,197.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S36R P177I",2
"lib1","SARS-CoV-2","GAATAGACAGAGCAAA",3,60.21,10.96,0.2,0.14,2.76,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGACATCAAAAA",3,1.19,NA,NA,NA,NA,NA,NA,"stop","T85* G155D V173P",3
"lib1","SARS-CoV-2","GAATAGACATTGTCGG",1,15.76,10.5,-0.26,0.16,2.55,1.14,0.01,"1 nonsynonymous","Y123T",1
"lib1","SARS-CoV-2","GAATAGACTAAATAAG",10,81.79,6,-4.76,1.05,1.5,1.24,0.01,">1 nonsynonymous","D59L P82M D90R S108I P191T",5
"lib1","SARS-CoV-2","GAATAGAGACTGATTT",2,37.95,10.46,-0.3,0.05,2.93,1.03,0,"1 nonsynonymous","T15V",1
"lib1","SARS-CoV-2","GAATAGAGCAAAGGAA",2,42.57,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N13I N130I Y175L",3
"lib1","SARS-CoV-2","GAATAGATACACGGTT",2,0.91,NA,NA,NA,NA,NA,NA,"stop","Y39* L122*",2
"lib1","SARS-CoV-2","GAATAGATGAGAAAAA",2,37.04,6,-4.76,1.42,1.5,1.21,0.02,">1 nonsynonymous","S43A K48S F62W V77G",4
"lib1","SARS-CoV-2","GAATAGCAAACACGAG",3,71.8,10.8,0.03,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGCAAGACCCCT",3,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I R124C",2
"lib1","SARS-CoV-2","GAATAGCCCTTAAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S G116C I138A Q168K",4
"lib1","SARS-CoV-2","GAATAGCTGACTCTAC",5,161.29,9.82,-0.95,0.04,2.81,1.05,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","GAATAGCTTTGTCAAA",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G A33R Y121P S129Y T140K",5
"lib1","SARS-CoV-2","GAATAGGAAAAACCTA",5,56.34,9.55,-1.21,0.11,2.48,1.06,0,">1 nonsynonymous","F12W V37M T55N V115N",4
"lib1","SARS-CoV-2","GAATAGGAAAGAAACC",2,35.06,10.76,0,0.06,2.86,1.06,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","GAATAGGAAGATTAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","I2H G9F W106*",3
"lib1","SARS-CoV-2","GAATAGGACTCAGAGA",2,23.56,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9V S19D N107S E141K T148M",5
"lib1","SARS-CoV-2","GAATAGGCATACTTAA",1,53.07,10.84,0.08,0.09,2.93,1.02,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","GAATAGGCTAGTTCTA",4,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A T85N F99L P149T V153W G166N",6
"lib1","SARS-CoV-2","GAATAGGGAAGGTGTA",4,34.9,8.64,-2.12,0.21,1.79,1.12,0.02,">1 nonsynonymous","L60T G74C",2
"lib1","SARS-CoV-2","GAATAGGGGTAACACT",4,0.37,NA,NA,NA,NA,NA,NA,"stop","G51F G86*",2
"lib1","SARS-CoV-2","GAATAGGGGTACAGAA",1,66.02,10.81,0.05,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGGTTACCAGTA",2,63.81,10.76,0,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGTAAAATAGTA",4,85.66,6.64,-4.12,0.68,1.5,1.13,0.06,">1 nonsynonymous","I142V P177Q C195M",3
"lib1","SARS-CoV-2","GAATAGTAAGAGTTAA",3,51.92,9.28,-1.49,0.17,1.65,1.1,0.01,"1 nonsynonymous","F47G",1
"lib1","SARS-CoV-2","GAATAGTACAGTCCTG",6,10.28,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F99K A105D P149R",3
"lib1","SARS-CoV-2","GAATAGTATGTATGCG",6,106.7,10.64,-0.13,0.04,2.95,1,0,">1 nonsynonymous","N58A T148M T201S",3
"lib1","SARS-CoV-2","GAATAGTCATACCGTG",6,38.13,10.87,0.11,0.09,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATAGTCCACTACAC",4,69.01,10.59,-0.17,0.05,2.94,1.02,0,">1 nonsynonymous","C61P P149Q",2
"lib1","SARS-CoV-2","GAATAGTGAAATACAC",5,11.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3Y W23R D97L R136I C158G T201V",6
"lib1","SARS-CoV-2","GAATAGTGTAGCGTAC",5,1.34,NA,NA,NA,NA,NA,NA,"stop","R16L E141N Q144* V180G",4
"lib1","SARS-CoV-2","GAATAGTTAATATCGT",5,0.23,NA,NA,NA,NA,NA,NA,"stop","V11* A105H",2
"lib1","SARS-CoV-2","GAATAGTTGATTTTAA",3,18.73,10.06,-0.7,0.08,2.89,1.06,0,">1 nonsynonymous","N4S Y119S",2
"lib1","SARS-CoV-2","GAATAGTTGGCACTAC",14,333.92,10.63,-0.13,0.04,2.91,1.02,0,">1 nonsynonymous","I2P C61F Q163F",3
"lib1","SARS-CoV-2","GAATAGTTGTTAAAAC",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S I104K P191V T201W",4
"lib1","SARS-CoV-2","GAATAGTTTTACGGGT",3,72.47,10.44,-0.33,0.03,2.88,1.07,0,">1 nonsynonymous","T55K D90Q E141L",3
"lib1","SARS-CoV-2","GAATATAAAACCGCAG",5,35.47,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","Y35R Y119S F185S T201A",4
"lib1","SARS-CoV-2","GAATATAAAGAATAAC",4,38.11,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G101L K128N Y165M",3
"lib1","SARS-CoV-2","GAATATAAATCAAATA",3,86.31,10.76,0,0.08,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GAATATAACAACTATG",3,48.82,8.92,-1.84,0.28,1.5,1.02,0.04,">1 nonsynonymous","N1T T85M L95C",3
"lib1","SARS-CoV-2","GAATATAACGTTGAAT",6,105.78,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39S V77E D90F",3
"lib1","SARS-CoV-2","GAATATAATATTTACC",1,11.49,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","L5G S19L G51C L95M K114M D137H",6
"lib1","SARS-CoV-2","GAATATAATTTCTCAC",3,2.49,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib1","SARS-CoV-2","GAATATAGAATAGTAC",4,100.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44S R124L",2
"lib1","SARS-CoV-2","GAATATAGATTGCCTA",4,27.39,10.2,-0.56,0.13,2.74,1.01,0.01,">1 nonsynonymous","D34V T55R",2
"lib1","SARS-CoV-2","GAATATAGCACAAAAA",3,23.28,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F8N Q84V T100L P149T Q176R",5
"lib1","SARS-CoV-2","GAATATAGCCGAACAA",2,28.74,6.55,-4.21,0.5,1.5,1.13,0.03,">1 nonsynonymous","Y39M F44H S45Y V52A N58P D97N W106V",7
"lib1","SARS-CoV-2","GAATATAGTTTACGAC",1,7.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T15N G86F",2
"lib1","SARS-CoV-2","GAATATAGTTTTGATA",5,22.8,8.26,-2.5,0.29,1.5,1.05,0.03,">1 nonsynonymous","R16K A89T V180A",3
"lib1","SARS-CoV-2","GAATATATAGCTAAAG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y21* D34P A81T D90N",4
"lib1","SARS-CoV-2","GAATATATGGAGAACG",13,0.91,NA,NA,NA,NA,NA,NA,"stop","A14G D90M W106*",3
"lib1","SARS-CoV-2","GAATATATGTGATTTA",4,42,10.03,-0.73,0.06,2.19,1.05,0,">1 nonsynonymous","N30C T46A",2
"lib1","SARS-CoV-2","GAATATATTGACTGAA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","N151H A192*",2
"lib1","SARS-CoV-2","GAATATCAATCAACAT",7,99.53,10.57,-0.19,0.04,2.95,1.04,0,">1 nonsynonymous","I2N Q144H",2
"lib1","SARS-CoV-2","GAATATCATTCTTAAC",3,21.62,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F17K N24G N120L",3
"lib1","SARS-CoV-2","GAATATCCACCGCGAT",11,153.07,8.17,-2.6,0.15,1.5,1.16,0.01,">1 nonsynonymous","R136T I142Q",2
"lib1","SARS-CoV-2","GAATATCCATAAAGAA",6,75.33,10.61,-0.16,0.06,2.94,1.03,0,">1 nonsynonymous","N1C S164N",2
"lib1","SARS-CoV-2","GAATATCCCGAACTAT",2,82.06,6,-4.76,1.08,1.5,1.16,0.01,">1 nonsynonymous","C6K K56V L122H Y175S",4
"lib1","SARS-CoV-2","GAATATCGAACATGTG",1,6.87,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I80P A105R K198L",3
"lib1","SARS-CoV-2","GAATATCTGGGCCGCA",1,15.34,6,-4.76,2,3,1.4,0.02,">1 nonsynonymous","G86V P149H V173L",3
"lib1","SARS-CoV-2","GAATATGAAAACTGAG",11,1.38,NA,NA,NA,NA,NA,NA,"stop","N40D D59W S129* T140L C158R",5
"lib1","SARS-CoV-2","GAATATGAACTAAACA",1,7.12,9.31,-1.45,0.13,2.69,1.18,0.01,">1 nonsynonymous","A81Q S139C",2
"lib1","SARS-CoV-2","GAATATGAATACGTAG",4,29.46,8.08,-2.68,0.23,1.91,1.2,0.02,">1 nonsynonymous","G155Q Q176R",2
"lib1","SARS-CoV-2","GAATATGATACTATCA",4,73.99,8.76,-2.01,0.13,2.41,1.02,0.01,">1 nonsynonymous","T3W N64R G146R F156I",4
"lib1","SARS-CoV-2","GAATATGCACTTAACA",9,121.2,10.54,-0.23,0.03,2.87,1.03,0,">1 nonsynonymous","A42F N151C",2
"lib1","SARS-CoV-2","GAATATGCCAAAAACT",7,58.69,10.78,0.01,0.07,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATATGTACCAGCAA",7,33.03,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A89K Y119F R136N R179S",4
"lib1","SARS-CoV-2","GAATATGTCTATCAGT",3,24.98,8.91,-1.85,0.18,1.5,1.15,0.01,">1 nonsynonymous","P7V V20A G152H",3
"lib1","SARS-CoV-2","GAATATGTGAAGATGG",4,53.41,6,-4.76,2,3,1.2,0.01,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","GAATATGTTTAACCTG",1,21.14,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1E I28L K114L Q176P",4
"lib1","SARS-CoV-2","GAATATTAACATGCGC",5,69.39,10.11,-0.65,0.11,2.6,1.1,0,">1 nonsynonymous","N4F G9L",2
"lib1","SARS-CoV-2","GAATATTAACTAAGCG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","GAATATTACTCCACAC",3,50.44,10.37,-0.39,0.11,2.6,1,0,">1 nonsynonymous","N58L N151M",2
"lib1","SARS-CoV-2","GAATATTAGATGTAAA",3,91.69,10.18,-0.58,0.05,2.78,1.01,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","GAATATTCACACATTA",1,6.76,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","Y50S L60I D68E",3
"lib1","SARS-CoV-2","GAATATTCATTAATGT",7,99.62,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9R Y39G I80M F156L F167A",5
"lib1","SARS-CoV-2","GAATATTCCAGTTTCC",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22P Y50L A81K D97N",4
"lib1","SARS-CoV-2","GAATATTCCCGAGAAT",4,1.45,NA,NA,NA,NA,NA,NA,"stop","V20R R27A Y91* E141* P149L S184R",6
"lib1","SARS-CoV-2","GAATATTCGGGATTAC",1,1.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180E",1
"lib1","SARS-CoV-2","GAATATTGAATATAGA",2,2.77,NA,NA,NA,NA,NA,NA,"stop","D75* D137G",2
"lib1","SARS-CoV-2","GAATATTGACAAACAC",2,56.3,9.56,-1.2,0.15,1.81,1.07,0.01,">1 nonsynonymous","A33I A89G T148A",3
"lib1","SARS-CoV-2","GAATATTGAGGATAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","E10* I88L Y91A E135I G155V",5
"lib1","SARS-CoV-2","GAATATTTAAACGGGG",6,37.22,6,-4.76,1.44,1.5,1.18,0.02,">1 nonsynonymous","S43F G86R K128P",3
"lib1","SARS-CoV-2","GAATATTTATACACAC",7,72.4,10.74,-0.02,0.07,2.94,1.04,0,">1 nonsynonymous","C61K T85R N130R",3
"lib1","SARS-CoV-2","GAATATTTCCCTCGTA",12,247.85,10.07,-0.7,0.07,2.47,1.01,0,">1 nonsynonymous","N24R V52N F62C",3
"lib1","SARS-CoV-2","GAATATTTTTGTAACG",4,0.39,NA,NA,NA,NA,NA,NA,"stop","T3R F12A C61* D98E T148M S184I",6
"lib1","SARS-CoV-2","GAATCAAAAAATATCG",5,61.09,10.16,-0.61,0.09,2.06,1.02,0,">1 nonsynonymous","A89T W106F",2
"lib1","SARS-CoV-2","GAATCAAAAACCTTTG",3,39.49,8.73,-2.03,0.11,2.35,1.04,0.01,">1 nonsynonymous","D90N G117C K128V",3
"lib1","SARS-CoV-2","GAATCAAAACATTGAT",11,93.48,8.13,-2.64,0.26,1.5,1.13,0.03,">1 nonsynonymous","N4Y Y121A F134I S200V",4
"lib1","SARS-CoV-2","GAATCAAAACTGACAT",1,1.32,NA,NA,NA,NA,NA,NA,"stop","A33T G51N D59T N120I K128*",5
"lib1","SARS-CoV-2","GAATCAAAATTCTTAA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","L38G Y93A N110G S129*",4
"lib1","SARS-CoV-2","GAATCAAACTACCTTG",2,36.98,9.71,-1.06,0.08,2.87,1.04,0,">1 nonsynonymous","N58R T170M",2
"lib1","SARS-CoV-2","GAATCAAATAATCACA",4,35.42,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","Y35H Y175K",2
"lib1","SARS-CoV-2","GAATCAACCTATTAGG",1,6.63,7.11,-3.65,0.62,1.5,1,0.08,">1 nonsynonymous","K87I N92E V173F",3
"lib1","SARS-CoV-2","GAATCAACTTGGATTG",3,12.64,7.4,-3.36,0.44,1.5,1.12,0.07,">1 nonsynonymous","N64S Q84W D137S",3
"lib1","SARS-CoV-2","GAATCAAGACGTCCCA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N A33H R179F",3
"lib1","SARS-CoV-2","GAATCAAGCCCATACA",3,22.38,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V103S K128D T170M",3
"lib1","SARS-CoV-2","GAATCAATGACCCTTC",7,1.08,NA,NA,NA,NA,NA,NA,"stop","L5* V11Y P96G R124S P133N",5
"lib1","SARS-CoV-2","GAATCAATTGTTACCC",4,42.06,10.31,-0.45,0.07,2.84,1.02,0,">1 nonsynonymous","N107R V173I",2
"lib1","SARS-CoV-2","GAATCACCGAATTCAA",2,74.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G86L N107M",2
"lib1","SARS-CoV-2","GAATCACCTGAACTTA",4,99.78,10.38,-0.39,0.06,2.85,1,0,">1 nonsynonymous","I2F V37L R136I",3
"lib1","SARS-CoV-2","GAATCACCTTAATAAC",5,29.58,10.95,0.18,0.1,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GAATCACGAACGAATT",2,30.25,10.53,-0.24,0.06,2.97,1.03,0,">1 nonsynonymous","T85I H189R",2
"lib1","SARS-CoV-2","GAATCACGGCACGTGG",3,113.11,8.57,-2.2,0.12,2.79,1.09,0.01,"1 nonsynonymous","Y143N",1
"lib1","SARS-CoV-2","GAATCACTACCGATTC",1,12.27,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L95E N118Q D137S T201L",4
"lib1","SARS-CoV-2","GAATCAGACTTATTTA",8,143.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N58Q Y91S C158L P177H",4
"lib1","SARS-CoV-2","GAATCAGCAGAAAAAC",1,12.03,7.97,-2.79,0.27,1.67,1.02,0.02,">1 nonsynonymous","T3Y K26R V65K G174R",4
"lib1","SARS-CoV-2","GAATCAGCCTAGAAGG",4,39.58,8.54,-2.22,0.08,2.7,1,0,">1 nonsynonymous","S45K Q168D S184Y",3
"lib1","SARS-CoV-2","GAATCAGCTCAATTGA",1,5.58,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R78L P96D Y123D",3
"lib1","SARS-CoV-2","GAATCAGGGGTGCAGG",2,51.89,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A105F G117S T140V G152N F160S",5
"lib1","SARS-CoV-2","GAATCAGTTGCCCGTT",3,0.57,NA,NA,NA,NA,NA,NA,"stop","N30V L38T L131A C150R E154*",5
"lib1","SARS-CoV-2","GAATCATAAAGAGCTA",3,29.36,6,-4.76,0.57,1.5,1.09,0,">1 nonsynonymous","S36M Y91T F134L P149F C158L",5
"lib1","SARS-CoV-2","GAATCATAAATTACAC",2,12.96,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","Y143M V182M",2
"lib1","SARS-CoV-2","GAATCATAACTAAGAC",8,39.07,9.61,-1.15,0.16,1.84,1.04,0.01,"1 nonsynonymous","P82M",1
"lib1","SARS-CoV-2","GAATCATAATAATTCA",3,50.4,6.06,-4.7,1.05,1.5,1.23,0.03,">1 nonsynonymous","L5K T100P N107W C158V",4
"lib1","SARS-CoV-2","GAATCATACATATAAA",8,64.43,10.59,-0.17,0.03,2.97,1,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","GAATCATACATGATAA",2,9.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1R T15I A42T G83I S200G",5
"lib1","SARS-CoV-2","GAATCATACTGCCACT",3,73.18,9.19,-1.58,0.16,1.51,1.21,0.01,"1 nonsynonymous","P96Y",1
"lib1","SARS-CoV-2","GAATCATCAAAAGATA",8,77.11,10.91,0.15,0.08,2.94,1.02,0,"1 nonsynonymous","V52I",1
"lib1","SARS-CoV-2","GAATCATCCAATGTTA",15,318.01,9.76,-1.01,0.09,2.05,1.05,0,">1 nonsynonymous","L38P F62L",2
"lib1","SARS-CoV-2","GAATCATGCCGAGAAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAATCATTCGTCTCTT",9,1.45,NA,NA,NA,NA,NA,NA,"stop","K48P T63R Y143*",3
"lib1","SARS-CoV-2","GAATCCAAAAATGTTA",1,5.49,7.19,-3.58,1.39,1.5,1.15,0.05,">1 nonsynonymous","N1T Y39S G117P G152F Y175G",5
"lib1","SARS-CoV-2","GAATCCAACTAAAGAG",3,11.83,10.75,-0.02,0.09,2.83,1.11,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","GAATCCAACTGTTTAG",1,119.93,10.4,-0.37,0.03,2.91,1.02,0,">1 nonsynonymous","I2L T100K G174K",3
"lib1","SARS-CoV-2","GAATCCAAGGGAATAC",4,54.87,9.81,-0.96,0.17,2.04,1.09,0.01,">1 nonsynonymous","V37W V65E",2
"lib1","SARS-CoV-2","GAATCCAAGTGTGAAC",7,41.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62K P96R Y143I",3
"lib1","SARS-CoV-2","GAATCCAATATGCCCT",10,12.83,NA,NA,NA,NA,NA,NA,"stop","Q79M G86D Y91E F99* A105V P133A",6
"lib1","SARS-CoV-2","GAATCCAATTCTCCAA",5,22.88,8.12,-2.65,0.16,1.56,1.11,0.01,">1 nonsynonymous","A18T V37R R73L E141K",4
"lib1","SARS-CoV-2","GAATCCAATTTATGCA",2,32.57,10.65,-0.12,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATCCACCACATCTC",3,38.2,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V37H G101D E141Y",3
"lib1","SARS-CoV-2","GAATCCACGTGTAATA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","L125R Q176*",2
"lib1","SARS-CoV-2","GAATCCAGCAAATTTA",5,0.24,NA,NA,NA,NA,NA,NA,"stop","L5S P96* P133M T201Y",4
"lib1","SARS-CoV-2","GAATCCAGCAATGTAA",3,17.22,10.52,-0.24,0.26,2.74,1.08,0.03,"synonymous","",0
"lib1","SARS-CoV-2","GAATCCAGGACACGCG",9,40.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19R Y50P V65D",3
"lib1","SARS-CoV-2","GAATCCAGTTACCAAA",5,3.27,NA,NA,NA,NA,NA,NA,"stop","N1G Q84R A89S W106* Y119Q",5
"lib1","SARS-CoV-2","GAATCCATACGTCGTC",4,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S D90G N107V R124V G174L",5
"lib1","SARS-CoV-2","GAATCCATAGACCGGA",12,214.58,8.38,-2.39,0.14,2.2,1.14,0.01,">1 nonsynonymous","K56P N120P",2
"lib1","SARS-CoV-2","GAATCCATCCTCATTG",8,96.95,10.78,0.02,0.06,2.93,1.04,0,"1 nonsynonymous","D59E",1
"lib1","SARS-CoV-2","GAATCCATTTATGTTG",1,6.92,10.42,-0.35,0.12,2.9,1,0.01,"1 nonsynonymous","P169F",1
"lib1","SARS-CoV-2","GAATCCCCCAATACAA",3,178.06,10.46,-0.31,0.04,2.9,1.02,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","GAATCCCCCTCTAATC",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G Y66T K87V S184I F185L",5
"lib1","SARS-CoV-2","GAATCCCCGAATAAAA",3,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M S41D L95Y R127S Q144P G152S",6
"lib1","SARS-CoV-2","GAATCCCTAAACATGA",2,42.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12G I88M R136M",3
"lib1","SARS-CoV-2","GAATCCCTACGTGCGG",2,8.76,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T3N G101L",2
"lib1","SARS-CoV-2","GAATCCGACGGCTACG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S G83C I138Q E154C",4
"lib1","SARS-CoV-2","GAATCCGATAAAAGCA",10,104.5,6.37,-4.39,0.61,1.5,1.17,0.02,">1 nonsynonymous","C61P D90I N109L K128N",4
"lib1","SARS-CoV-2","GAATCCGGCTCACAGC",1,10.06,10.87,0.1,0.17,2.97,1,0,">1 nonsynonymous","T3P N13Y T55V L122S",4
"lib1","SARS-CoV-2","GAATCCGGTCGGTAAG",3,15.09,7.81,-2.96,0.25,1.5,1.06,0.02,">1 nonsynonymous","G86T L95I",2
"lib1","SARS-CoV-2","GAATCCGTAAACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K114* K128H R136Y",3
"lib1","SARS-CoV-2","GAATCCGTATCTTTAT",6,156.72,10.11,-0.65,0.06,2.57,1.05,0,">1 nonsynonymous","N30L Y123H",2
"lib1","SARS-CoV-2","GAATCCTACTTACAAA",1,6.35,6,-4.76,2,3,1.13,0,">1 nonsynonymous","Y93T Y143G V153L",3
"lib1","SARS-CoV-2","GAATCCTAGACCTCGA",6,53.52,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","V77H D112G N157T",3
"lib1","SARS-CoV-2","GAATCCTTCGTACACC",2,8.29,6,-4.76,2,3,1.08,0,">1 nonsynonymous","R127L F160R G172S",3
"lib1","SARS-CoV-2","GAATCGAACAAACTAA",5,31.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64P A81I D97Y W106Q N120T",5
"lib1","SARS-CoV-2","GAATCGAACTGGACCA",1,29.23,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","N30L A42V Q84S R136G",4
"lib1","SARS-CoV-2","GAATCGAACTTCGTAT",4,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72G P177R T201V",3
"lib1","SARS-CoV-2","GAATCGAAGGTGAAAC",1,31.39,9.64,-1.13,0.18,2.41,1.07,0.01,">1 nonsynonymous","D59E R136F F156R",3
"lib1","SARS-CoV-2","GAATCGAATAGTCGCA",4,14.48,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","G74V P82I Y93E F156I V173S",5
"lib1","SARS-CoV-2","GAATCGACGCCTACCA",3,67.74,10.79,0.02,0.07,2.9,1.05,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","GAATCGAGAACAAGTA",6,9.21,10.21,-0.56,0.1,2.94,1,0.01,">1 nonsynonymous","N120S Q168G T201K",3
"lib1","SARS-CoV-2","GAATCGAGAGTTTACT",3,15.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103L Q176A",2
"lib1","SARS-CoV-2","GAATCGAGGCTGTCTT",1,28.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K48Y L60A L95A G155S Y175R",5
"lib1","SARS-CoV-2","GAATCGATAAGATATC",3,104.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F134R I142K Y165G G196V",4
"lib1","SARS-CoV-2","GAATCGATACAACTCG",6,2.84,NA,NA,NA,NA,NA,NA,"stop","N40*",1
"lib1","SARS-CoV-2","GAATCGATCTTTTTCC",1,58.48,8.92,-1.85,0.07,2.91,1.04,0,">1 nonsynonymous","I2T V37I Y119I A145G",4
"lib1","SARS-CoV-2","GAATCGCAAACCCCTA",1,34.36,10.69,-0.07,0.06,2.92,1.02,0,">1 nonsynonymous","T85K K132D",2
"lib1","SARS-CoV-2","GAATCGCAAAGTCATT",7,314.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5T Y35T G86N P96S P169E Y175N P197D",7
"lib1","SARS-CoV-2","GAATCGCACTTATGAG",5,0.34,NA,NA,NA,NA,NA,NA,"stop","I28* L162D P169H",3
"lib1","SARS-CoV-2","GAATCGCTCCAAACAT",6,0.97,NA,NA,NA,NA,NA,NA,"stop","P54*",1
"lib1","SARS-CoV-2","GAATCGGCCCGCAGCC",8,111.8,10.79,0.02,0.06,2.87,1.03,0,">1 nonsynonymous","T3R V153Y",2
"lib1","SARS-CoV-2","GAATCGGCGATTATGG",11,184.96,10.65,-0.12,0.04,2.89,1.05,0,">1 nonsynonymous","Y39M K128L",2
"lib1","SARS-CoV-2","GAATCGGCTGCAGGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S19L S45D K56E S69* P82L Y143E G155T",7
"lib1","SARS-CoV-2","GAATCGGTGTATAAAT",1,7.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G101S L122T",2
"lib1","SARS-CoV-2","GAATCGGTTAACAAAT",6,88.04,10.37,-0.4,0.06,2.87,1.04,0,">1 nonsynonymous","N1D G9R D97V",3
"lib1","SARS-CoV-2","GAATCGTATGCATTTG",3,20.15,10.67,-0.09,0.08,2.92,1.03,0,">1 nonsynonymous","T85R G174L L188R",3
"lib1","SARS-CoV-2","GAATCGTCAACATTAT",5,79.46,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y35M S45Q T63I G101Y K128T S139Y C150Y",7
"lib1","SARS-CoV-2","GAATCGTTGGGATGGT",10,207.9,8.9,-1.86,0.07,2.65,1.11,0,">1 nonsynonymous","A22N I104C F156C",3
"lib1","SARS-CoV-2","GAATCTAAACCCATCC",1,29.14,10.57,-0.19,0.04,2.9,1.06,0,">1 nonsynonymous","D98N G155T",2
"lib1","SARS-CoV-2","GAATCTAATAGCCTGG",5,87.25,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P96K Q176R",2
"lib1","SARS-CoV-2","GAATCTAATGATTGCA",3,13.19,9,-1.76,0.2,1.84,1.1,0.01,">1 nonsynonymous","K56W D75Y V173C",3
"lib1","SARS-CoV-2","GAATCTAATGCCCATT",2,66.95,9.56,-1.21,0.06,2.82,1.07,0,">1 nonsynonymous","N40H N109Y",2
"lib1","SARS-CoV-2","GAATCTACAAGGCACA",4,85.86,9.14,-1.63,0.1,2.48,1.14,0.01,">1 nonsynonymous","C61R R179K",2
"lib1","SARS-CoV-2","GAATCTACAGCTCTCC",6,111.89,10.23,-0.53,0.12,2.29,1.02,0.01,">1 nonsynonymous","N13S A22S S29C",3
"lib1","SARS-CoV-2","GAATCTACAGTATCTA",1,20.56,10.5,-0.26,0.07,2.99,1,0,">1 nonsynonymous","V37T K56S S129V",3
"lib1","SARS-CoV-2","GAATCTACCACAACGT",4,29.2,10.1,-0.66,0.06,2.85,1.08,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","GAATCTACCCTCTTAA",6,3.58,NA,NA,NA,NA,NA,NA,"stop","L5E F156*",2
"lib1","SARS-CoV-2","GAATCTAGAATAGAAT",5,0.04,NA,NA,NA,NA,NA,NA,"stop","R16P W106* N107C G172T",4
"lib1","SARS-CoV-2","GAATCTATAAACCTCT",1,16.6,7.86,-2.9,0.19,2.03,1.05,0.01,">1 nonsynonymous","L38T F44N V173N",3
"lib1","SARS-CoV-2","GAATCTATACCTGCCC",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y G83P",2
"lib1","SARS-CoV-2","GAATCTATGAACCGAA",3,55.4,10.68,-0.08,0.06,2.91,1.05,0,">1 nonsynonymous","N24S D90N I104V",3
"lib1","SARS-CoV-2","GAATCTATGAACGTTG",3,28.64,9.89,-0.87,0.15,2.07,1.06,0.01,">1 nonsynonymous","F12V D34P",2
"lib1","SARS-CoV-2","GAATCTATGCTAGATG",3,107.01,10.53,-0.23,0.03,2.82,1.08,0,"1 nonsynonymous","S36Y",1
"lib1","SARS-CoV-2","GAATCTATGTTCCACT",1,20.53,10.63,-0.13,0.1,2.92,1.06,0.01,">1 nonsynonymous","S36L N64T",2
"lib1","SARS-CoV-2","GAATCTATTAACATGC",3,51.59,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S69L E135T L162R",3
"lib1","SARS-CoV-2","GAATCTCACGGAACAG",3,0.44,NA,NA,NA,NA,NA,NA,"stop","A22* S45R L131V",3
"lib1","SARS-CoV-2","GAATCTCACTACAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5R Y35R F44* P54E V77R D98S A105G Y121P T201E",9
"lib1","SARS-CoV-2","GAATCTCAGTTTTTCC",2,13.76,8.78,-1.98,0.22,2.58,1.14,0.02,">1 nonsynonymous","F44N I104T K114T",3
"lib1","SARS-CoV-2","GAATCTCATCTCTCCG",1,44.47,10.7,-0.06,0.06,2.89,1.09,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GAATCTCATGAGTACG",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E A33N F47V S139V",4
"lib1","SARS-CoV-2","GAATCTCATTAAAAAA",12,99,8.07,-2.7,0.23,1.5,1.11,0.02,">1 nonsynonymous","Q84H Y91T D97H",3
"lib1","SARS-CoV-2","GAATCTCATTAACAGG",5,29.5,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","N58S R78T Y91A N120L T170Y",5
"lib1","SARS-CoV-2","GAATCTCATTCCAAAT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S L57I D90G",3
"lib1","SARS-CoV-2","GAATCTCATTGATGAT",5,117.14,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37P A81K P96L P177L",4
"lib1","SARS-CoV-2","GAATCTCGACCCGATA",4,57.59,7.35,-3.42,0.29,1.5,1.11,0.03,">1 nonsynonymous","F44C N107V",2
"lib1","SARS-CoV-2","GAATCTCGCTATAGTA",1,8.46,9.22,-1.55,0.12,3,1,0.01,">1 nonsynonymous","L5G N120P",2
"lib1","SARS-CoV-2","GAATCTCTTAATATAA",2,13.78,6.38,-4.38,0.8,1.5,1.08,0.05,">1 nonsynonymous","I28M P96L G117Y",3
"lib1","SARS-CoV-2","GAATCTGAAACATAAT",6,46.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V71T C150Y",2
"lib1","SARS-CoV-2","GAATCTGCGCCCAAAA",11,11.42,6,-4.76,0.94,3,1.23,0.01,">1 nonsynonymous","V11T D34I I88R K114Q",4
"lib1","SARS-CoV-2","GAATCTGGGCGAATCC",3,61.02,9.96,-0.81,0.08,2.11,1.03,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","GAATCTGGGCTTAATT",2,33.1,10.72,-0.05,0.08,2.9,1.04,0,"1 nonsynonymous","G83H",1
"lib1","SARS-CoV-2","GAATCTGTCACATCAC",3,9.63,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","N64T D90A S113M P149R",4
"lib1","SARS-CoV-2","GAATCTGTGCAATTTT",4,23.04,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2S A42C D75V P161Q",4
"lib1","SARS-CoV-2","GAATCTTAGGGTACGA",13,172.02,9.79,-0.97,0.03,2.91,1.04,0,">1 nonsynonymous","K56I N171E",2
"lib1","SARS-CoV-2","GAATCTTAGTACGATA",7,116.62,10.06,-0.71,0.06,2.68,1.01,0,">1 nonsynonymous","I28A K128A",2
"lib1","SARS-CoV-2","GAATCTTATCCTTATG",1,0,NA,NA,NA,NA,NA,NA,"stop","P96* V115I",2
"lib1","SARS-CoV-2","GAATCTTATTTCAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124L S129N",2
"lib1","SARS-CoV-2","GAATCTTCTGATATTC",5,14.74,6.31,-4.45,1.02,3,1.14,0,">1 nonsynonymous","I2L T46W D68G E135G C158D",5
"lib1","SARS-CoV-2","GAATCTTGAAGCTACC",16,53.59,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","T15R D90Y E154F Q176S",4
"lib1","SARS-CoV-2","GAATCTTGGATAAGAT",1,6.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10W D90F N107S",3
"lib1","SARS-CoV-2","GAATGAAAAAAAAGGA",6,39.27,9.23,-1.54,0.21,1.77,1.1,0.01,">1 nonsynonymous","P96L A190D",2
"lib1","SARS-CoV-2","GAATGAAAATGACTCG",1,26.01,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N92G C158I",2
"lib1","SARS-CoV-2","GAATGAAACAAAACAG",7,15.99,6,-4.76,2,3,1.27,0.03,">1 nonsynonymous","V52L F70S G86P V103K",4
"lib1","SARS-CoV-2","GAATGAAACACCGAAC",1,23.78,10.7,-0.06,0.09,2.95,1,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","GAATGAAATAGATTCT",1,11.62,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","F44G V103F S139H",3
"lib1","SARS-CoV-2","GAATGAAATATTAAGA",4,13.86,6,-4.76,2,3,1.06,0,">1 nonsynonymous","S41L L60D I104S G155Y",4
"lib1","SARS-CoV-2","GAATGAAATATTTGAT",10,68.98,9.69,-1.07,0.08,1.95,1.07,0,"1 nonsynonymous","V77F",1
"lib1","SARS-CoV-2","GAATGAAATCATTAAC",4,32.01,10.21,-0.55,0.12,2.64,1.06,0.01,">1 nonsynonymous","T55D I80M",2
"lib1","SARS-CoV-2","GAATGAAATGCGTTCG",2,30.15,10.25,-0.51,0.11,2.31,1.07,0,">1 nonsynonymous","S43P Y123L K128Y",3
"lib1","SARS-CoV-2","GAATGAACCATACACA",4,9.23,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I2V T15C K94I Y119H Q144C G174Y",6
"lib1","SARS-CoV-2","GAATGAACGATTTTCC",10,35.48,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A89S W106F G155Y V181A A190D",5
"lib1","SARS-CoV-2","GAATGAACTACGATAT",1,46.15,9.88,-0.88,0.15,1.95,1.07,0.01,">1 nonsynonymous","K26R R136D",2
"lib1","SARS-CoV-2","GAATGAACTTCAACGA",3,7.92,7.45,-3.31,0.17,1.6,1.11,0.01,">1 nonsynonymous","S45W P54S N64Y E135Y",4
"lib1","SARS-CoV-2","GAATGAAGATAGATTT",3,17.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L60T N107Y",2
"lib1","SARS-CoV-2","GAATGAATGGCAGTAA",1,12.81,10.44,-0.32,0.11,2.96,1.05,0.01,"1 nonsynonymous","E10N",1
"lib1","SARS-CoV-2","GAATGAATGTAAAAGT",4,32.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S53F L57S V103L I138N",4
"lib1","SARS-CoV-2","GAATGAATTTTGTTAC",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M P96R C102L",3
"lib1","SARS-CoV-2","GAATGACAAAGTCAAC",9,118.54,9.48,-1.29,0.08,2.81,1.09,0,">1 nonsynonymous","R16S Y119S I142L",3
"lib1","SARS-CoV-2","GAATGACAGATAAAAC",2,19.03,9.75,-1.01,0.16,2.27,1.08,0.01,">1 nonsynonymous","T15H Y21V V77L K87R",4
"lib1","SARS-CoV-2","GAATGACATCAAGATA",7,116.83,10.61,-0.16,0.04,2.92,1.03,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","GAATGACCCCACCTCT",2,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q D34T K128V G174Y",4
"lib1","SARS-CoV-2","GAATGACCTTTATTAC",3,53.15,8.19,-2.58,0.13,1.61,1.12,0.01,">1 nonsynonymous","K128T Y165S",2
"lib1","SARS-CoV-2","GAATGACGCTCCAGGT",1,57.26,6,-4.76,1.47,1.5,1.31,0.03,">1 nonsynonymous","S36A K56V V77R I88V",4
"lib1","SARS-CoV-2","GAATGACGGGTTGAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116L V181L",2
"lib1","SARS-CoV-2","GAATGACGGTGATATA",4,22.4,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","G51C D98S F126L T148L N157P",5
"lib1","SARS-CoV-2","GAATGACGTCTATAAC",2,5.69,6,-4.76,2,3,1.06,0,">1 nonsynonymous","T3F Y91N K132D E141T E154M H189Y",6
"lib1","SARS-CoV-2","GAATGACTAGACTAAG",6,11.24,7.23,-3.53,0.42,1.5,1.01,0.07,">1 nonsynonymous","A42S C49E D59H K94E W106L S129D",6
"lib1","SARS-CoV-2","GAATGACTCTAAAGAT",3,84.56,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D34G G117D L131F Y175K",4
"lib1","SARS-CoV-2","GAATGACTGGAGCCTA",2,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169W",1
"lib1","SARS-CoV-2","GAATGACTTGTATGCT",2,59.55,10.14,-0.62,0.06,2.71,1.02,0,">1 nonsynonymous","N4F A18T K114A L122H",4
"lib1","SARS-CoV-2","GAATGAGACGTGGGTT",3,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89E N107E Y121P P149H Y165K",5
"lib1","SARS-CoV-2","GAATGAGAGACATTTT",4,17.99,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y39D S108T V181K",3
"lib1","SARS-CoV-2","GAATGAGAGGATGCAT",3,91.92,9.87,-0.89,0.04,2.85,1.03,0,">1 nonsynonymous","N64R K87Q K114T",3
"lib1","SARS-CoV-2","GAATGAGCATTCTAGT",1,102.62,10.24,-0.52,0.06,2.72,1.02,0,">1 nonsynonymous","A42D R136N",2
"lib1","SARS-CoV-2","GAATGAGGAGTTGAGT",2,41.83,8.48,-2.28,0.12,2.64,1.08,0.01,">1 nonsynonymous","K94V L125N F160P",3
"lib1","SARS-CoV-2","GAATGAGGCAGAATAA",3,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120W N151K L188G",3
"lib1","SARS-CoV-2","GAATGATAAGCCACAC",6,82.62,9.89,-0.87,0.11,2.38,1.01,0,">1 nonsynonymous","I72T K128G",2
"lib1","SARS-CoV-2","GAATGATCGCAATCAT",2,57.14,8.02,-2.74,0.26,1.5,1.13,0.02,">1 nonsynonymous","R16K S36M P54T P161C",4
"lib1","SARS-CoV-2","GAATGATCGTTTAAAG",4,1.58,NA,NA,NA,NA,NA,NA,"stop","D34P N118* P161Y L187K",4
"lib1","SARS-CoV-2","GAATGATGCCCCCCCA",3,19.96,10.01,-0.75,0.17,2.2,1.1,0.02,">1 nonsynonymous","A89H N110R",2
"lib1","SARS-CoV-2","GAATGATGGTTAAATG",1,5.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","GAATGATTAGAATACT",6,72.95,6.53,-4.24,0.51,1.5,1.19,0.03,">1 nonsynonymous","G86M G152R",2
"lib1","SARS-CoV-2","GAATGATTCCTTCAAT",6,4.88,NA,NA,NA,NA,NA,NA,"stop","F12E G51* S129D E141Y",4
"lib1","SARS-CoV-2","GAATGCAAAGCGCCTA",8,98.94,6,-4.76,1.57,1.5,1.18,0.01,">1 nonsynonymous","Y35S Y66A K94S L131G",4
"lib1","SARS-CoV-2","GAATGCAACGACAATA",1,13.88,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V20E S36Y",2
"lib1","SARS-CoV-2","GAATGCAATATTAGAG",5,36.46,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37N C61R G86I D97L I104Q G146R P149R",7
"lib1","SARS-CoV-2","GAATGCAATCAGCACA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","V11Q Y165*",2
"lib1","SARS-CoV-2","GAATGCACAATAGAGT",2,18.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K26L C31K V37A V103T Y119V",5
"lib1","SARS-CoV-2","GAATGCACCATACACA",3,27.55,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C31I C158R",2
"lib1","SARS-CoV-2","GAATGCACGTAATAAT",3,21.21,11.07,0.31,0.09,2.86,1.06,0,">1 nonsynonymous","N1L R16N N171T",3
"lib1","SARS-CoV-2","GAATGCAGGCCTGCTG",2,1.25,NA,NA,NA,NA,NA,NA,"stop","E10D F44S P161R G166A V181*",5
"lib1","SARS-CoV-2","GAATGCATCCTCAGTG",1,24.92,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I2V G83Q Y123V R136F G155T",5
"lib1","SARS-CoV-2","GAATGCATTAACTAGA",2,39.93,9.09,-1.68,0.08,2.78,1.15,0,">1 nonsynonymous","I2C K87S G152S F156R",4
"lib1","SARS-CoV-2","GAATGCCACAAAAGAG",3,74.72,10.25,-0.52,0.04,2.82,1.02,0,">1 nonsynonymous","N4Q G51A",2
"lib1","SARS-CoV-2","GAATGCCACCGGATTT",4,31.08,10.51,-0.25,0.1,2.77,1.15,0.01,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","GAATGCCCAGGCCTTA",9,43.8,10.54,-0.23,0.07,2.88,1.02,0,">1 nonsynonymous","A33I L57W T148A",3
"lib1","SARS-CoV-2","GAATGCCCTGAGGAAG",2,25.49,9.63,-1.13,0.13,2.74,1.04,0.01,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","GAATGCCGCATGCAAG",8,333.89,9.79,-0.97,0.1,2.25,1.02,0,">1 nonsynonymous","F17L G146S",2
"lib1","SARS-CoV-2","GAATGCCGTGATATTC",3,112.93,10.64,-0.13,0.05,2.9,1.08,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","GAATGCCGTTATCGGG",2,31.79,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","Y39P G86C G117C F167L G174A",5
"lib1","SARS-CoV-2","GAATGCCTCGATTTGT",2,21.64,6.04,-4.72,0.83,1.5,1.17,0.02,">1 nonsynonymous","T46E D98R K132G C158I H189R",5
"lib1","SARS-CoV-2","GAATGCCTCGTAAAAC",4,68.93,6.42,-4.35,0.61,1.5,1.16,0.03,">1 nonsynonymous","C6F Y50H A89N C102L",4
"lib1","SARS-CoV-2","GAATGCGAACAAGTGA",8,66.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7T L122V C158W",3
"lib1","SARS-CoV-2","GAATGCGATAATTAAA",5,49.04,6.02,-4.74,0.85,1.5,1.15,0.01,">1 nonsynonymous","V65F D90V Q144V",3
"lib1","SARS-CoV-2","GAATGCGCAACGGAGG",1,20.62,10.14,-0.63,0.08,2.79,1.04,0,">1 nonsynonymous","R27S S41I E141F",3
"lib1","SARS-CoV-2","GAATGCGCTGGAACCT",3,69.77,8.29,-2.47,0.27,1.5,1.21,0.03,">1 nonsynonymous","W106M V115D Y119L",3
"lib1","SARS-CoV-2","GAATGCGTAAGAAATG",1,1.72,NA,NA,NA,NA,NA,NA,"stop","V37L V71*",2
"lib1","SARS-CoV-2","GAATGCTATGCGGGAT",1,5.62,10.77,0.01,0.16,3,1,0,">1 nonsynonymous","D59V Q168W",2
"lib1","SARS-CoV-2","GAATGCTCGAGGGCCG",5,32.57,7.84,-2.92,0.3,1.5,1.17,0.02,">1 nonsynonymous","T3L R73A I142L V180L",4
"lib1","SARS-CoV-2","GAATGCTGTCTCCCCC",3,11.74,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A14L R179G",2
"lib1","SARS-CoV-2","GAATGCTTTATCGGAT",3,15.6,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","N40H I80P D90N D98H P177A",5
"lib1","SARS-CoV-2","GAATGGAAACGCCGGT",1,28.36,10.17,-0.6,0.08,2.88,1,0,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","GAATGGAAGCAAATTA",4,119.7,8.31,-2.45,0.27,1.5,1.14,0.03,">1 nonsynonymous","W106I R136L",2
"lib1","SARS-CoV-2","GAATGGAATAACTCTA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K G51S N120F",3
"lib1","SARS-CoV-2","GAATGGATTAGACAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S45T D112E R124*",3
"lib1","SARS-CoV-2","GAATGGCAAACCCGCT",3,51.83,7.1,-3.66,0.31,1.77,1.19,0.03,"1 nonsynonymous","Y159R",1
"lib1","SARS-CoV-2","GAATGGCAATACACAG",20,15.2,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4M T15P R27I A42Y E141N N157C T201M",7
"lib1","SARS-CoV-2","GAATGGCAGATACCTT",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N I88P",2
"lib1","SARS-CoV-2","GAATGGCGGCCAAATA",4,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N E141V",2
"lib1","SARS-CoV-2","GAATGGCTAGTCATTG",11,0,NA,NA,NA,NA,NA,NA,"stop","T15S Y35L V77* P149R A190G",5
"lib1","SARS-CoV-2","GAATGGCTTAAATATC",5,22.38,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I88D C158R",2
"lib1","SARS-CoV-2","GAATGGGATTACGGAC",6,61.07,6,-4.76,1.22,1.5,1.13,0.01,">1 nonsynonymous","V37I G86K D97I G172V",4
"lib1","SARS-CoV-2","GAATGGGCGTTTAATG",6,88.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","GAATGGGGAAAGAATA",3,56.5,6,-4.76,1.04,1.5,1.17,0.01,">1 nonsynonymous","G9F F17Y T85Y L95Q S139I Q176L",6
"lib1","SARS-CoV-2","GAATGGTAAAAAATTG",5,79.69,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A89W N107F N120S",3
"lib1","SARS-CoV-2","GAATGGTAAGCATTAT",3,32.93,8.31,-2.45,0.09,2.53,1.08,0,">1 nonsynonymous","T3W I142D",2
"lib1","SARS-CoV-2","GAATGGTACCTCAAGC",3,198.75,10.49,-0.28,0.03,2.89,1.03,0,">1 nonsynonymous","N120S S139C",2
"lib1","SARS-CoV-2","GAATGGTATATTTACT",2,48.75,10.82,0.06,0.07,2.9,1.01,0,"1 nonsynonymous","S43V",1
"lib1","SARS-CoV-2","GAATGGTGAATCATCA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F A89N S129V",3
"lib1","SARS-CoV-2","GAATGGTGTACACTAA",2,79.39,10.68,-0.09,0.08,2.85,1.08,0,">1 nonsynonymous","I2R G9E",2
"lib1","SARS-CoV-2","GAATGGTGTGACAACC",5,5.8,NA,NA,NA,NA,NA,NA,"stop","C61E T100Q Y165*",3
"lib1","SARS-CoV-2","GAATGGTTAGGAAAAC",8,168.06,6.41,-4.35,0.4,1.5,1.14,0.01,">1 nonsynonymous","P54I I72E Y119L F134R Q176L",5
"lib1","SARS-CoV-2","GAATGGTTATCAACGT",7,13.23,6.08,-4.68,0.63,3,1.16,0.01,">1 nonsynonymous","G9I N40S N92A D98Y S113F P177T",6
"lib1","SARS-CoV-2","GAATGTAAAACCTAGG",6,140.81,10.26,-0.51,0.04,2.87,1,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","GAATGTAAATGGGCAT",5,1.46,NA,NA,NA,NA,NA,NA,"stop","D90H Y165*",2
"lib1","SARS-CoV-2","GAATGTAACAGAGCTA",2,40.72,10.23,-0.53,0.07,2.93,1.02,0,">1 nonsynonymous","T15E S147C",2
"lib1","SARS-CoV-2","GAATGTAAGACTGGAG",2,1.17,NA,NA,NA,NA,NA,NA,"stop","T63* I104M P169*",3
"lib1","SARS-CoV-2","GAATGTAATGAGGATT",2,28.72,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12R N92R Q144F G172E",4
"lib1","SARS-CoV-2","GAATGTACGTCAGATT",7,101.3,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I104C Y123D Y175H",3
"lib1","SARS-CoV-2","GAATGTAGAAGCATCG",11,111.64,10.77,0.01,0.06,2.89,1.05,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","GAATGTAGTACTGATT",2,22.32,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","L60G F99Q",2
"lib1","SARS-CoV-2","GAATGTAGTGGATGGA",1,13.32,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","V20H L38P",2
"lib1","SARS-CoV-2","GAATGTATCCTTCCCC",3,22.83,10.66,-0.1,0.05,2.86,1.08,0,"1 nonsynonymous","F134W",1
"lib1","SARS-CoV-2","GAATGTATGATGAACT",4,57.34,6.67,-4.09,0.42,1.5,1.16,0.02,">1 nonsynonymous","E10V N107I F126D",3
"lib1","SARS-CoV-2","GAATGTATTATCTATA",3,43.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4K N107Y G117T",3
"lib1","SARS-CoV-2","GAATGTCACGACTCAA",7,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I A105G C158K F185V",4
"lib1","SARS-CoV-2","GAATGTCTAAGCGAAT",1,19.61,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T55S L60P P82V I142W G152A",5
"lib1","SARS-CoV-2","GAATGTCTGAATAACT",5,0.65,NA,NA,NA,NA,NA,NA,"stop","S129* T201S",2
"lib1","SARS-CoV-2","GAATGTGACCGTCTGG",1,69.59,10.86,0.1,0.09,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GAATGTGTACGGGGAC",9,257.19,10.05,-0.71,0.06,2.55,1.04,0,">1 nonsynonymous","R27W D59L",2
"lib1","SARS-CoV-2","GAATGTGTCACCGCAT",2,12.49,9.13,-1.63,0.12,1.86,1.07,0.01,">1 nonsynonymous","F44L A105F N120F",3
"lib1","SARS-CoV-2","GAATGTGTCCCCTAGA",5,15.43,6.02,-4.75,0.92,1.5,1.13,0.02,">1 nonsynonymous","C61D K114E Y119L V182E",4
"lib1","SARS-CoV-2","GAATGTGTGAAATATT",8,53.98,9.14,-1.63,0.1,2.04,1.23,0,">1 nonsynonymous","A18M N40A G155E",3
"lib1","SARS-CoV-2","GAATGTTAGACAAATG",3,20.06,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A22Y S41I N120I R179C",4
"lib1","SARS-CoV-2","GAATGTTAGGTATAAA",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y F185K",2
"lib1","SARS-CoV-2","GAATGTTAGTGTTTAC",7,36.49,8.55,-2.22,0.41,1.5,1,0.08,">1 nonsynonymous","Y50R V71K T170P",3
"lib1","SARS-CoV-2","GAATGTTCCCGAGTAT",4,25.32,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5R D68K V77G",3
"lib1","SARS-CoV-2","GAATGTTGGAAAGCTT",2,41.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I72S L122D F134I",3
"lib1","SARS-CoV-2","GAATTAAAAACTAATG",8,80.6,9.55,-1.21,0.09,1.85,1.11,0,">1 nonsynonymous","I2K W23C",2
"lib1","SARS-CoV-2","GAATTAAAACGTTAAG",1,21.49,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51W D59F A89I D137H Q176L",5
"lib1","SARS-CoV-2","GAATTAAAAGATAACC",3,97.57,10.63,-0.14,0.04,2.87,1.1,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","GAATTAAAAGCAGATG",3,11.83,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","E10N T15V A33R Y91F E135L T201N",6
"lib1","SARS-CoV-2","GAATTAAAATGTGAGC",1,62.1,9.8,-0.96,0.13,1.94,1.1,0.01,">1 nonsynonymous","C31N N109K S129W P197Q",4
"lib1","SARS-CoV-2","GAATTAAACCACCCAA",1,29.19,9.94,-0.82,0.1,1.98,1.05,0.01,">1 nonsynonymous","V32F W106T",2
"lib1","SARS-CoV-2","GAATTAAACGAAAAAA",8,93.79,10.72,-0.05,0.06,2.86,1.08,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","GAATTAAAGAATAAGT",3,59.17,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","S69M G83T R127Y T201P",4
"lib1","SARS-CoV-2","GAATTAAAGAATTTTT",1,41.39,10.67,-0.1,0.04,2.96,1,0,">1 nonsynonymous","P149L K198Q",2
"lib1","SARS-CoV-2","GAATTAAAGATATGAA",8,112.35,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T15R R25C K114S Y175P",4
"lib1","SARS-CoV-2","GAATTAAAGGAAAGGT",3,32.54,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y66D Q84V N120A P161V Q176R",5
"lib1","SARS-CoV-2","GAATTAAAGGAATATC",3,24.74,6,-4.76,0.77,1.5,1.06,0,">1 nonsynonymous","F12N S43R F156R Y165V",4
"lib1","SARS-CoV-2","GAATTAAATAAAACCC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","T100M A105E S129Y E141* P149R",5
"lib1","SARS-CoV-2","GAATTAAATATTATGT",2,13.58,10.02,-0.75,0.37,2.23,1.03,0.06,">1 nonsynonymous","F62Q N107P",2
"lib1","SARS-CoV-2","GAATTAACAAACCAAG",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R N92M",2
"lib1","SARS-CoV-2","GAATTAACACTACAGC",2,22.94,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y91L A105N G117L",3
"lib1","SARS-CoV-2","GAATTAACATGGTCTG",4,50.31,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51S P82L S184I",3
"lib1","SARS-CoV-2","GAATTAACTGCGCGCG",7,30.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22L L60P G83T Y175Q",4
"lib1","SARS-CoV-2","GAATTAAGATACACCG",12,1926.67,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","V37R K128I K132T Y143K",4
"lib1","SARS-CoV-2","GAATTAAGATTCCCAA",4,28.78,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T100G R124G K128Y",3
"lib1","SARS-CoV-2","GAATTAAGGATTCTAG",13,38.75,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T15F I72K L95C G166S",4
"lib1","SARS-CoV-2","GAATTAAGGCTAAAAA",6,2.23,NA,NA,NA,NA,NA,NA,"stop","F44L Y93*",2
"lib1","SARS-CoV-2","GAATTAATAACTATTA",1,55.82,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9L I28C Y50Q D97P F167N",5
"lib1","SARS-CoV-2","GAATTAATACAACTCT",3,49.15,10.87,0.11,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTAATAGCAACTA",5,40.38,10.67,-0.09,0.04,2.93,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTAATATACTAAG",3,111.51,10.68,-0.09,0.05,2.89,1.07,0,">1 nonsynonymous","I2C C61K G83R K198A",4
"lib1","SARS-CoV-2","GAATTAATATAGTCAA",5,30.74,8.36,-2.4,0.21,1.83,1.11,0.02,">1 nonsynonymous","N107A Y121I N171S",3
"lib1","SARS-CoV-2","GAATTAATATGAATTT",4,55.24,9.94,-0.82,0.08,2.54,1.03,0,">1 nonsynonymous","L5M K48Q Q144L",3
"lib1","SARS-CoV-2","GAATTAATCCACTTCT",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N F8Q V65A F99P C102T Y121N",6
"lib1","SARS-CoV-2","GAATTAATCTGCTGGT",1,32.31,11.03,0.26,0.08,2.96,1,0,">1 nonsynonymous","P54R Y178H",2
"lib1","SARS-CoV-2","GAATTAATGCAACGGA",3,25.56,6.32,-4.45,0.76,1.5,1.16,0.04,">1 nonsynonymous","S45D L57T E141L G155C",4
"lib1","SARS-CoV-2","GAATTAATGCTGCCAT",2,36.01,9.29,-1.47,0.15,1.81,1.13,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","GAATTAATTAAATCGG",2,17.7,10.7,-0.07,0.18,2.84,1.11,0.02,"synonymous","",0
"lib1","SARS-CoV-2","GAATTACAAAGTCACT",2,170.62,10.11,-0.65,0.04,2.89,1.06,0,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","GAATTACACCACCCGA",3,40.61,10.69,-0.07,0.06,2.9,1.05,0,"1 nonsynonymous","A81G",1
"lib1","SARS-CoV-2","GAATTACATACAATCA",3,92.42,6,-4.76,1.11,1.5,1.16,0.01,">1 nonsynonymous","F62Y T85N T100I S113W Y159L",5
"lib1","SARS-CoV-2","GAATTACATACTCTAA",6,77.09,10.83,0.07,0.08,2.9,1.04,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","GAATTACCCTTGCGCG",5,0.91,NA,NA,NA,NA,NA,NA,"stop","L95R N109M Y178*",3
"lib1","SARS-CoV-2","GAATTACCGAAATTAA",6,65.22,6.54,-4.23,0.52,1.5,1.17,0.03,">1 nonsynonymous","S29L F62S N64K W106T F134N T201A",6
"lib1","SARS-CoV-2","GAATTACCTTAAATGG",7,21.21,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15C C49L T55R K128L R136N",5
"lib1","SARS-CoV-2","GAATTACGCAAATTAC",3,23.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P96N S113M N120I V173S L183S",5
"lib1","SARS-CoV-2","GAATTACTAAGATAAC",3,21.79,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6S K87R Y119P F126L C150L",5
"lib1","SARS-CoV-2","GAATTACTAAGCATGA",2,72.42,10.21,-0.56,0.03,2.93,1,0,">1 nonsynonymous","F126L P149L C195V",3
"lib1","SARS-CoV-2","GAATTACTCCATTATT",3,34.49,8.12,-2.65,0.32,1.5,1.2,0.03,">1 nonsynonymous","W106T F134E T201V",3
"lib1","SARS-CoV-2","GAATTACTCTTCAGGA",2,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L V181P",2
"lib1","SARS-CoV-2","GAATTAGAAATTATCT",7,52.18,6.18,-4.59,0.66,1.5,1.26,0.02,">1 nonsynonymous","N13S N24W C49L F62C G74S Y165L",6
"lib1","SARS-CoV-2","GAATTAGATTGTCCAT",6,67.51,10.61,-0.15,0.04,2.87,1.07,0,">1 nonsynonymous","T63M S200C",2
"lib1","SARS-CoV-2","GAATTAGCAAAATAAC",4,0.45,NA,NA,NA,NA,NA,NA,"stop","S29A N64C R73* T140S",4
"lib1","SARS-CoV-2","GAATTAGCCAAATCAA",1,13.15,10.25,-0.52,0.06,2.9,1.02,0,"1 nonsynonymous","D34Q",1
"lib1","SARS-CoV-2","GAATTAGCGAAACCGG",10,82.88,8.15,-2.61,0.22,1.5,1.03,0.01,">1 nonsynonymous","N4A Y21K",2
"lib1","SARS-CoV-2","GAATTAGCGGTAGGTA",2,16.62,6,-4.76,1.69,3,1.12,0,">1 nonsynonymous","G83F G101V W106L",3
"lib1","SARS-CoV-2","GAATTAGGAAAAAACA",3,21.66,6.95,-3.82,0.5,1.5,1.12,0.07,">1 nonsynonymous","W106H Y123M P133F",3
"lib1","SARS-CoV-2","GAATTAGGCGATAATT",9,61.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T55H F167K",2
"lib1","SARS-CoV-2","GAATTAGGGAGAGTTA",10,210.29,8.04,-2.73,0.16,2.36,1.09,0.01,">1 nonsynonymous","P7T L122Q C158S",3
"lib1","SARS-CoV-2","GAATTAGTGCAAATTT",6,125.24,10.79,0.03,0.07,2.9,1.04,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","GAATTAGTTAATTTCA",1,23.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","E10A E76A E141K G172S",4
"lib1","SARS-CoV-2","GAATTAGTTCTAAGTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F17R I104* P177S",3
"lib1","SARS-CoV-2","GAATTAGTTTACAGGT",4,144.61,6,-4.76,1.93,1.5,1.32,0.03,">1 nonsynonymous","Y39I C61A G86L T100Q L122V V173L",6
"lib1","SARS-CoV-2","GAATTATAAATATAAG",6,60.95,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","K56T I88M N120R F167T",4
"lib1","SARS-CoV-2","GAATTATACTGAAAGA",1,26.17,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F70P G101M S113E L188S",4
"lib1","SARS-CoV-2","GAATTATATAAATTGA",1,41.98,10.69,-0.07,0.05,2.88,1.05,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","GAATTATATACATATT",6,103.66,10.36,-0.41,0.06,2.77,1.06,0,">1 nonsynonymous","S43A F47L D59Y Y143F",4
"lib1","SARS-CoV-2","GAATTATATGATAAAA",2,26.12,9.88,-0.88,0.15,1.94,1.08,0.01,">1 nonsynonymous","L38H T55F",2
"lib1","SARS-CoV-2","GAATTATCACGTGACA",1,16.23,6.51,-4.25,0.58,1.5,1.33,0.03,">1 nonsynonymous","G86Q V182I",2
"lib1","SARS-CoV-2","GAATTATCCCTTGGAG",7,60.18,10.21,-0.56,0.06,2.85,1.06,0,"1 nonsynonymous","R73M",1
"lib1","SARS-CoV-2","GAATTATCTCTACGTT",15,79.95,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10L D90P A145N",3
"lib1","SARS-CoV-2","GAATTATGGTACGTAA",4,11.76,9.9,-0.87,0.28,1.63,1.22,0.04,">1 nonsynonymous","A33T S139W",2
"lib1","SARS-CoV-2","GAATTATTAAACTTGA",3,65.6,7.63,-3.14,0.19,1.5,1.04,0.01,">1 nonsynonymous","C6M Y91V V173Q",3
"lib1","SARS-CoV-2","GAATTATTAAATCCAA",4,32.78,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","W23T I88V K94G S129R E141D F160I G166R",7
"lib1","SARS-CoV-2","GAATTATTCGTCCTTG",7,14.76,NA,NA,NA,NA,NA,NA,"stop","N13Y K26* R124N Y159E",4
"lib1","SARS-CoV-2","GAATTATTGTAGACTC",5,50.71,8.28,-2.49,0.17,1.5,1.08,0.01,">1 nonsynonymous","Q84V K87N T100W S139F",4
"lib1","SARS-CoV-2","GAATTATTTTACAGGG",1,1,NA,NA,NA,NA,NA,NA,"stop","Y39C L60*",2
"lib1","SARS-CoV-2","GAATTCAAAATACATG",2,11.7,6.26,-4.5,0.68,1.5,1.14,0.02,">1 nonsynonymous","K56S F70R",2
"lib1","SARS-CoV-2","GAATTCAAACATTAAC",11,92.3,8.87,-1.89,0.14,1.77,1.13,0.01,">1 nonsynonymous","L60E N107T A190T T201K",4
"lib1","SARS-CoV-2","GAATTCAACCCAAATC",2,15.58,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y165R T170K G174V",3
"lib1","SARS-CoV-2","GAATTCACGTTTAAAT",6,33.15,9.95,-0.81,0.1,2.18,1.02,0,">1 nonsynonymous","N4P G83V",2
"lib1","SARS-CoV-2","GAATTCACTCCCGACT",12,106.72,9.62,-1.15,0.09,1.83,1.13,0,">1 nonsynonymous","L5Y Y39R F47E A190E",4
"lib1","SARS-CoV-2","GAATTCACTCCGTTAG",6,4.85,NA,NA,NA,NA,NA,NA,"stop","N120G C150D N157* T170C",4
"lib1","SARS-CoV-2","GAATTCACTCGGCTCC",2,0.97,NA,NA,NA,NA,NA,NA,"stop","R124*",1
"lib1","SARS-CoV-2","GAATTCAGAAAAGATG",5,64.74,10.59,-0.17,0.06,2.94,1.03,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","GAATTCATAGGAGAAA",2,24.42,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37G S69V C150K N157I",4
"lib1","SARS-CoV-2","GAATTCATCTAAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39S C49* I104V P133* E141N S147R",6
"lib1","SARS-CoV-2","GAATTCATGACGCTGA",8,34.48,6.43,-4.33,0.6,1.5,1.19,0.03,">1 nonsynonymous","T3R N24K L95N W106L L122P F134L",6
"lib1","SARS-CoV-2","GAATTCATTATCCACT",4,10.74,6,-4.76,2,3,1.32,0.02,">1 nonsynonymous","C102R N157T",2
"lib1","SARS-CoV-2","GAATTCATTATGTTAC",4,34.4,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","V37G R73F D98N G172S",4
"lib1","SARS-CoV-2","GAATTCATTCTATCAT",2,31.83,10.26,-0.5,0.08,2.66,1.07,0,"1 nonsynonymous","P133N",1
"lib1","SARS-CoV-2","GAATTCCACAACATAT",5,0.1,NA,NA,NA,NA,NA,NA,"stop","A14E T100* N151L",3
"lib1","SARS-CoV-2","GAATTCCACCAACAAT",5,0.63,NA,NA,NA,NA,NA,NA,"stop","K56Y Q79E D98A S139L F167*",5
"lib1","SARS-CoV-2","GAATTCCAGGCTTTAT",6,66.65,10.75,-0.02,0.06,2.9,1.06,0,">1 nonsynonymous","L5M T201C",2
"lib1","SARS-CoV-2","GAATTCCCATGCCCCA",4,13.32,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","R25M V77K D98V",3
"lib1","SARS-CoV-2","GAATTCCGAAAATACT",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107F T201L",2
"lib1","SARS-CoV-2","GAATTCCGCTGATCAT",2,35.79,8.41,-2.35,0.3,1.5,1.06,0.05,">1 nonsynonymous","N24G I88L N130Y G174A",4
"lib1","SARS-CoV-2","GAATTCCTACGAATAA",2,47.08,10.84,0.08,0.07,2.91,1.06,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GAATTCCTGTCAACTG",8,1.2,NA,NA,NA,NA,NA,NA,"stop","I28S S36N N58I V103N E141P Y175*",6
"lib1","SARS-CoV-2","GAATTCCTTAGGCGTA",3,57.64,10.73,-0.03,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTCCTTTAGCTGC",8,31,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","N1C V11S S19V S43P D98V K132L",6
"lib1","SARS-CoV-2","GAATTCGAAAATGATA",6,28.78,7.8,-2.97,0.17,1.5,1.12,0.01,">1 nonsynonymous","T63A A81R G146M",3
"lib1","SARS-CoV-2","GAATTCGATATTACAT",2,4.82,NA,NA,NA,NA,NA,NA,"stop","A18M F44S G74P F160N S184*",5
"lib1","SARS-CoV-2","GAATTCGTTGAGTAAA",5,46.92,8.87,-1.89,0.21,1.5,1.1,0.02,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","GAATTCTAATCTTGTT",10,25.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3R G51L G101L L183N",4
"lib1","SARS-CoV-2","GAATTCTACCAAAGAG",11,49.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M L95D",2
"lib1","SARS-CoV-2","GAATTCTACCGCTCGA",5,43.91,6.65,-4.11,0.32,1.5,1.22,0.02,">1 nonsynonymous","V20L S129T I142V N151S",4
"lib1","SARS-CoV-2","GAATTCTATCTCTAAA",1,25.25,8.96,-1.8,0.07,2.84,1.03,0,">1 nonsynonymous","K87T K94V L125G",3
"lib1","SARS-CoV-2","GAATTCTCAAGTAGTT",6,49.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N13K Y39L S69W D98G Y143H",5
"lib1","SARS-CoV-2","GAATTCTGCTCTGATA",1,12.01,9.9,-0.86,0.12,2.77,1,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","GAATTCTGGCTTCGTA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","D90N S129F T201*",3
"lib1","SARS-CoV-2","GAATTGAACGAACACT",10,215.1,10.66,-0.1,0.03,2.94,1.02,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","GAATTGAACTTGTTCT",3,11.78,9.9,-0.86,0.24,2.42,1.05,0.02,">1 nonsynonymous","A14V I138R",2
"lib1","SARS-CoV-2","GAATTGAGGATAATCT",3,24.03,8.79,-1.98,0.2,1.68,1.22,0.02,">1 nonsynonymous","E135F F167Y T201F",3
"lib1","SARS-CoV-2","GAATTGAGTTACTCAT",2,18.6,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","R25M G117C Q168V",3
"lib1","SARS-CoV-2","GAATTGATACGTTAAC",4,79.28,10.71,-0.06,0.08,2.88,1.06,0,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","GAATTGATGGAGTAAT",2,25.16,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S29F Q84L N107F",3
"lib1","SARS-CoV-2","GAATTGATGTCCAATA",1,43.02,9.67,-1.09,0.14,2.1,1.09,0.01,">1 nonsynonymous","N64K N120K S139I",3
"lib1","SARS-CoV-2","GAATTGCAAGCGGATC",1,4.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAATTGCAGTTCTCGT",2,11.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F W106N",2
"lib1","SARS-CoV-2","GAATTGCATACAATAA",1,16.67,9.81,-0.95,0.16,2.19,1.03,0.01,">1 nonsynonymous","Y91G Q163H",2
"lib1","SARS-CoV-2","GAATTGCCTAATCCAA",5,45.95,7.98,-2.78,0.21,1.5,1.11,0.02,">1 nonsynonymous","D34L I138T G166L T201K",4
"lib1","SARS-CoV-2","GAATTGCGTTAGGCAC",4,64.1,10.38,-0.39,0.03,2.9,1.06,0,">1 nonsynonymous","A14I L125M",2
"lib1","SARS-CoV-2","GAATTGCTCGTAAATC",12,156.59,10.39,-0.38,0.04,2.86,1.02,0,">1 nonsynonymous","A105G T148L",2
"lib1","SARS-CoV-2","GAATTGCTGTGGCCAC",1,28.17,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C31Q Y119L V181L P197Q",4
"lib1","SARS-CoV-2","GAATTGGATATAAAGC",1,49.61,10.44,-0.32,0.07,2.91,1,0,">1 nonsynonymous","F134W I142Y",2
"lib1","SARS-CoV-2","GAATTGGCAATCATAC",2,24.94,8.76,-2.01,0.2,1.8,1.17,0.01,">1 nonsynonymous","N13L D75L",2
"lib1","SARS-CoV-2","GAATTGGGAAGCCGGA",2,90.23,10.61,-0.15,0.04,2.88,1.04,0,">1 nonsynonymous","S43V L122Y K128M",3
"lib1","SARS-CoV-2","GAATTGGTCTTGTTAT",5,26.05,6,-4.76,0.95,1.5,1.18,0.01,">1 nonsynonymous","G9V L95S W106G",3
"lib1","SARS-CoV-2","GAATTGGTGAAGAAAG",4,0.68,NA,NA,NA,NA,NA,NA,"stop","S43R T55A T100* I138W",4
"lib1","SARS-CoV-2","GAATTGTAATAAATGT",13,184,10.74,-0.02,0.04,2.93,1.03,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","GAATTGTACGACCAAC",7,153.05,10.82,0.06,0.06,2.93,1.04,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","GAATTGTATGTCGAAC",3,59.98,10.8,0.04,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTGTATTAGACAT",3,108.95,9.7,-1.07,0.04,2.8,1.05,0,">1 nonsynonymous","Y119F K128L",2
"lib1","SARS-CoV-2","GAATTGTCCGAGCAAA",18,301.09,10.2,-0.56,0.03,2.76,1,0,">1 nonsynonymous","L57R T140S F160K",3
"lib1","SARS-CoV-2","GAATTGTGCTCCTCAC",18,242.82,9.11,-1.65,0.09,2.14,1.13,0,">1 nonsynonymous","Y66Q P169Q S184C",3
"lib1","SARS-CoV-2","GAATTTAAACCCAATT",12,185.56,10.37,-0.39,0.03,2.86,1.06,0,">1 nonsynonymous","K26S N64L T201K",3
"lib1","SARS-CoV-2","GAATTTAAAGACGCCA",10,181.09,10.7,-0.06,0.05,2.84,1.06,0,">1 nonsynonymous","L5S T55W",2
"lib1","SARS-CoV-2","GAATTTAACAGAAACT",1,5.56,6.32,-4.45,0.95,1.5,1.07,0.07,">1 nonsynonymous","S129V C150K",2
"lib1","SARS-CoV-2","GAATTTAAGAAAGGAT",8,21.14,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","A14G C49R G152S",3
"lib1","SARS-CoV-2","GAATTTAATATTCTAC",2,37.23,9.44,-1.33,0.12,2.42,1.13,0.01,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","GAATTTAATCAAGGTA",3,26.96,10.75,-0.01,0.07,2.92,1.04,0,">1 nonsynonymous","T15S E141A",2
"lib1","SARS-CoV-2","GAATTTAATTATTCTT",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K C49L W106T P191L",4
"lib1","SARS-CoV-2","GAATTTACACTGCCCG",2,56.78,10.85,0.08,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTTACGAAAATCT",3,100.07,9.9,-0.86,0.06,2.57,1.08,0,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","GAATTTAGAAAAAGGT",3,2.21,NA,NA,NA,NA,NA,NA,"stop","Q84K L122*",2
"lib1","SARS-CoV-2","GAATTTAGTCAATTAA",4,61.03,6,-4.76,1.35,1.5,1.25,0.03,">1 nonsynonymous","G83S A105D",2
"lib1","SARS-CoV-2","GAATTTATAACCTAGC",2,8.78,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D68Q A81I C102E F160S Y175K",5
"lib1","SARS-CoV-2","GAATTTATACCACTCA",5,16.7,9.96,-0.81,0.1,3,1,0,">1 nonsynonymous","T46I T100K I142L F156V",4
"lib1","SARS-CoV-2","GAATTTATAGAAACTT",2,29.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V32M P82F V115R Y165L",4
"lib1","SARS-CoV-2","GAATTTATATGAGGAC",3,43.38,10.72,-0.04,0.06,2.97,1,0,">1 nonsynonymous","K56D E141S",2
"lib1","SARS-CoV-2","GAATTTATTAGAAGGC",12,245.76,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C102T N120M Y178K G196R",4
"lib1","SARS-CoV-2","GAATTTATTTGGACAG",13,193.69,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A42D G83T P177V",3
"lib1","SARS-CoV-2","GAATTTCAAACATAAG",1,13.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9D A14D T46C D68K C102K G166W",6
"lib1","SARS-CoV-2","GAATTTCAAAGCCATT",1,35.13,10.28,-0.48,0.06,2.78,1,0,">1 nonsynonymous","F62G D97E S147I V194A",4
"lib1","SARS-CoV-2","GAATTTCAAATAACGA",9,61.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A42P C49V I88G Q144N G166C T201L",6
"lib1","SARS-CoV-2","GAATTTCAAGTCATAA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","N110K N120* S129D P149L T201S",5
"lib1","SARS-CoV-2","GAATTTCAGAAAATCG",1,22.62,9.63,-1.14,0.22,1.78,1.16,0.04,">1 nonsynonymous","L60G Y121W",2
"lib1","SARS-CoV-2","GAATTTCAGTCAAGGA",1,98.14,10.79,0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTTCATGAAATGA",3,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122F F134L S139C",3
"lib1","SARS-CoV-2","GAATTTCCGTAAACAC",2,59.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y165G N171H Q176P",3
"lib1","SARS-CoV-2","GAATTTCCTGTGATTG",3,48.14,10.55,-0.21,0.05,2.92,1.01,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","GAATTTCGAGCAAAAC",6,150.32,10.66,-0.1,0.05,2.94,1.02,0,">1 nonsynonymous","R78S E141R T201W",3
"lib1","SARS-CoV-2","GAATTTCGGTTATTTC",2,6.01,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","P82M N92V T100V",3
"lib1","SARS-CoV-2","GAATTTGAAAAAAGCT",7,29.27,8.62,-2.15,0.28,1.5,1.04,0.03,">1 nonsynonymous","N1A G86C L187D",3
"lib1","SARS-CoV-2","GAATTTGACAAAACAC",1,17.41,10.75,-0.01,0.03,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTTGATAGCACTA",3,54.39,10.53,-0.23,0.11,2.75,1.05,0.01,">1 nonsynonymous","P54Q Y91L",2
"lib1","SARS-CoV-2","GAATTTGCCATCCGTG",2,1.39,NA,NA,NA,NA,NA,NA,"stop","L5W V37* Y91S C150T Y175F",5
"lib1","SARS-CoV-2","GAATTTGCCGAACATA",7,144.15,10.03,-0.74,0.06,2.17,1,0,"1 nonsynonymous","I28T",1
"lib1","SARS-CoV-2","GAATTTGCGTTACTAA",5,36.92,6,-4.76,1.28,1.5,1.34,0.03,">1 nonsynonymous","P54S A105L E154R",3
"lib1","SARS-CoV-2","GAATTTGGCTAGGTAC",5,0.4,NA,NA,NA,NA,NA,NA,"stop","L131W G174*",2
"lib1","SARS-CoV-2","GAATTTGTGTTATGGC",3,40.1,10.43,-0.34,0.08,2.85,1.05,0,">1 nonsynonymous","S129C P197V",2
"lib1","SARS-CoV-2","GAATTTTAAAACAAAT",15,116.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23R V32S N157W",3
"lib1","SARS-CoV-2","GAATTTTAAAACGATG",8,111.56,10.48,-0.28,0.05,2.95,1.01,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","GAATTTTACAAAGGAC",1,37,6.38,-4.39,0.5,1.5,1.14,0.02,">1 nonsynonymous","K48A Y93H",2
"lib1","SARS-CoV-2","GAATTTTACAGTGTGA",14,98.14,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","V11S P96T",2
"lib1","SARS-CoV-2","GAATTTTACCATTGAC",2,82.83,10.78,0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAATTTTACTGCAATT",5,28.5,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9T K87G K94E N120T",4
"lib1","SARS-CoV-2","GAATTTTACTTCTGAG",7,69.4,10.75,-0.01,0.07,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GAATTTTAGATACACA",3,28.19,6.92,-3.85,0.38,1.5,1.15,0.03,">1 nonsynonymous","N1A Y66F A81G G86Q",4
"lib1","SARS-CoV-2","GAATTTTATATAACAT",6,2.48,NA,NA,NA,NA,NA,NA,"stop","L60* K128Q",2
"lib1","SARS-CoV-2","GAATTTTCAATTCGTA",2,29.96,10.76,-0.01,0.12,2.87,1.03,0.01,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","GAATTTTGGGACAGAC",10,125.48,8.68,-2.08,0.1,2.48,1.17,0,">1 nonsynonymous","C6N V37N N118D",3
"lib1","SARS-CoV-2","GAATTTTTAACATGGA",4,34.09,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A22Y V37E A89L N118Q S139Y",5
"lib1","SARS-CoV-2","GAATTTTTAAGAATGT",6,205.51,6.15,-4.62,0.61,1.5,1.19,0.01,">1 nonsynonymous","F44M P149C Y175L",3
"lib1","SARS-CoV-2","GAATTTTTCCATAGCA",7,137.36,9.48,-1.29,0.16,1.5,1.01,0.01,">1 nonsynonymous","R27L V173T",2
"lib1","SARS-CoV-2","GACAAAAAAAAAAAAA",7,18.46,6.23,-4.54,0.61,1.5,1.2,0.02,">1 nonsynonymous","S19V V71M F156G G172T",4
"lib1","SARS-CoV-2","GACAAAAAAAAAGTCA",2,23.33,10.8,0.04,0.06,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAAAAAAAAATTGC",6,40.95,8.56,-2.21,0.13,2.83,1.12,0.01,">1 nonsynonymous","T3S N157L K198Y",3
"lib1","SARS-CoV-2","GACAAAAAAAAGATCT",2,17.33,10.62,-0.14,0.07,2.91,1.04,0,">1 nonsynonymous","P54H L60Y N120L",3
"lib1","SARS-CoV-2","GACAAAAAAACGCGGC",1,16.37,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","G117E R179V",2
"lib1","SARS-CoV-2","GACAAAAAACCTAGAA",1,45.64,10.36,-0.4,0.04,2.84,1.07,0,">1 nonsynonymous","E10T E141H",2
"lib1","SARS-CoV-2","GACAAAAAAGCACAGC",1,55.15,8.83,-1.94,0.1,2.73,1.16,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","GACAAAAAATAAACAT",3,39.99,10.17,-0.59,0.07,2.87,1.04,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","GACAAAAAATCATCGA",5,116.53,10.68,-0.08,0.04,2.89,1.06,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","GACAAAAACAGAATCC",5,36.32,6,-4.76,2,1.5,1.14,0.02,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","GACAAAAACCTATGTA",2,20.67,6,-4.76,1.35,2.39,1.14,0.01,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","GACAAAAACGCAATAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G86V F99P K114L V153F K198*",5
"lib1","SARS-CoV-2","GACAAAAAGAACGGAT",3,20.19,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y93F V103Y",2
"lib1","SARS-CoV-2","GACAAAAAGCATGACA",4,40.77,6.07,-4.69,1.21,1.5,1.19,0.04,">1 nonsynonymous","G86C K94V R127T",3
"lib1","SARS-CoV-2","GACAAAAAGCTGTGAC",1,56.19,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","E10V S36L D90C P96D P149Q V180W",6
"lib1","SARS-CoV-2","GACAAAAAGTCTATAT",3,126.7,8.3,-2.46,0.14,1.87,1.09,0.01,">1 nonsynonymous","T170K Q176K",2
"lib1","SARS-CoV-2","GACAAAAATAGCTTTT",4,19.57,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A18G Y39R Y91G N107S Y123D T201P",6
"lib1","SARS-CoV-2","GACAAAACTGGTAATA",2,53.22,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F8L Y35Q D75W G152V T201N",5
"lib1","SARS-CoV-2","GACAAAACTTAACACT",3,40.43,6.06,-4.71,1,1.5,1.23,0.02,">1 nonsynonymous","F12G S53L N110S F167V R179C",5
"lib1","SARS-CoV-2","GACAAAAGACACTTCG",4,29.6,10.8,0.04,0.09,2.86,1.06,0,">1 nonsynonymous","N4K T55G K56N",3
"lib1","SARS-CoV-2","GACAAAAGACGATATG",5,0.86,NA,NA,NA,NA,NA,NA,"stop","T100D L122*",2
"lib1","SARS-CoV-2","GACAAAAGCTTTCGCT",11,6.34,NA,NA,NA,NA,NA,NA,"stop","S45L D90P T148L F156*",4
"lib1","SARS-CoV-2","GACAAAAGGAAATCAT",1,22.4,8.22,-2.54,0.27,1.5,1,0.04,">1 nonsynonymous","S113F P133V",2
"lib1","SARS-CoV-2","GACAAAAGGAATACTC",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P N13C R136V",3
"lib1","SARS-CoV-2","GACAAAAGGCAGCCTC",3,61.04,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L122C S139C F167M Q176F",4
"lib1","SARS-CoV-2","GACAAAAGTACCTCAA",5,62.8,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D90E F167I",2
"lib1","SARS-CoV-2","GACAAAAGTACGCTAC",2,7.7,10.74,-0.03,0.08,2.96,1.05,0,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","GACAAAATACCAAAAA",1,14.58,10.69,-0.07,0.06,2.88,1.08,0,">1 nonsynonymous","G83R K132A",2
"lib1","SARS-CoV-2","GACAAAATAGAAATAA",7,25.15,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10G N110V F134A Y143R N171R",5
"lib1","SARS-CoV-2","GACAAAATGCAACTAA",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D S113P N157D S200V",4
"lib1","SARS-CoV-2","GACAAAATGGGAGAGA",1,6.55,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42R P82W H189G",3
"lib1","SARS-CoV-2","GACAAACAATATAATC",2,76.93,10.04,-0.72,0.05,2.88,1.02,0,">1 nonsynonymous","L125S S184L T201M",3
"lib1","SARS-CoV-2","GACAAACACTAGAGGT",2,6.67,10.24,-0.52,0.08,2.95,1,0,"1 nonsynonymous","E154W",1
"lib1","SARS-CoV-2","GACAAACCAGTTGTTT",8,122.6,10.65,-0.12,0.08,2.93,1.07,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","GACAAACCGAACTCTC",3,10.74,8.37,-2.4,0.36,1.89,1.12,0.06,">1 nonsynonymous","E10V D98H N157H",3
"lib1","SARS-CoV-2","GACAAACGGTCTGATA",6,1,NA,NA,NA,NA,NA,NA,"stop","R27* D90C F99S F134T F185R",5
"lib1","SARS-CoV-2","GACAAACTAACTTTGG",2,18.38,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V52R Q84A N109D Y119M C150G G166F",6
"lib1","SARS-CoV-2","GACAAACTCCCGTACA",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146A C158T",2
"lib1","SARS-CoV-2","GACAAACTCGCAACCT",3,41.44,10.25,-0.51,0.06,2.76,1.06,0,"1 nonsynonymous","L57S",1
"lib1","SARS-CoV-2","GACAAACTGAGACAAA",5,37.2,6.28,-4.48,0.53,1.5,1.18,0.01,">1 nonsynonymous","I28L F99R V103L D112E",4
"lib1","SARS-CoV-2","GACAAAGAAATAAAAA",1,30.49,10.21,-0.55,0.08,2.86,1.06,0,">1 nonsynonymous","V32I S45P V173D",3
"lib1","SARS-CoV-2","GACAAAGACCAGAGTA",6,5.82,NA,NA,NA,NA,NA,NA,"stop","D90* V153L",2
"lib1","SARS-CoV-2","GACAAAGATGTGTTGA",3,15.84,8.21,-2.55,0.18,2.23,1.08,0.01,">1 nonsynonymous","V32T T100H N118C G166M",4
"lib1","SARS-CoV-2","GACAAAGCATACTAGA",13,190.37,9.01,-1.76,0.07,2.79,1.13,0,">1 nonsynonymous","S29N C61S K87R Q168V",4
"lib1","SARS-CoV-2","GACAAAGCCGCTAGCT",2,44.46,10.41,-0.36,0.04,2.95,1,0,">1 nonsynonymous","S36F C61S",2
"lib1","SARS-CoV-2","GACAAAGCTCCGGTAA",3,35.72,10.3,-0.47,0.1,2.73,1,0,">1 nonsynonymous","G9A N13L D97L",3
"lib1","SARS-CoV-2","GACAAAGTAATAAGTA",5,80.93,10.76,-0.01,0.08,2.89,1.08,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","GACAAATACACAAAAT",11,61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L W106C S200L",3
"lib1","SARS-CoV-2","GACAAATATAACCCTG",13,104.29,8.48,-2.28,0.12,2.66,1.09,0,">1 nonsynonymous","Y119A G174V",2
"lib1","SARS-CoV-2","GACAAATCAACCGACA",3,70.56,10.57,-0.19,0.06,2.89,1.06,0,">1 nonsynonymous","N4S D97N G196S",3
"lib1","SARS-CoV-2","GACAAATCAGTACCAG",3,78.56,10.76,-0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAAATCCAAACGTA",7,61.03,10.79,0.03,0.06,2.87,1.07,0,">1 nonsynonymous","L57M D97K L122S",3
"lib1","SARS-CoV-2","GACAAATCCGAAAAAG",2,2.22,NA,NA,NA,NA,NA,NA,"stop","S36N N107H P149* K199I",4
"lib1","SARS-CoV-2","GACAAATCGAGATCAG",1,18.76,10.64,-0.13,0.06,2.92,1.07,0,">1 nonsynonymous","C61R K128R",2
"lib1","SARS-CoV-2","GACAAATGGGCCCTTA",4,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L F62S D112I",3
"lib1","SARS-CoV-2","GACAAATGTGCTCGGC",7,54.58,7.65,-3.11,0.27,1.5,1,0.02,">1 nonsynonymous","S43Q T85P L131G",3
"lib1","SARS-CoV-2","GACAAATTCCAAGATT",11,98.42,10.42,-0.34,0.04,2.67,1.02,0,">1 nonsynonymous","Y39L K56Y D97I Y123K K128M",5
"lib1","SARS-CoV-2","GACAAATTGACCATAA",2,19.8,10.84,0.08,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAAATTTGCGATTT",13,63.5,6.49,-4.27,0.49,1.55,1.21,0.02,">1 nonsynonymous","C61A V115W G146L",3
"lib1","SARS-CoV-2","GACAACAATCGACCTA",1,20.81,10.21,-0.55,0.11,2.62,1,0.01,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","GACAACACGATTCCTG",1,11.43,8.76,-2,0.23,1.57,1.05,0.02,">1 nonsynonymous","W106E E141Q",2
"lib1","SARS-CoV-2","GACAACAGACGAGGCG",9,107.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35W Y91C N157P T201P",4
"lib1","SARS-CoV-2","GACAACAGATAATGAA",3,33.21,10.75,-0.01,0.1,2.85,1.07,0,">1 nonsynonymous","T85Q P149M",2
"lib1","SARS-CoV-2","GACAACAGATTAAAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68L G83C A89W S129F Y165H K198L",6
"lib1","SARS-CoV-2","GACAACAGCTACACGC",1,162.15,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P149M Y175P",2
"lib1","SARS-CoV-2","GACAACATGAGACTAA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","I28* S36V I142Y Q176R P177C",5
"lib1","SARS-CoV-2","GACAACATGCTGCTTT",4,60.45,10.66,-0.1,0.09,2.88,1.07,0,"1 nonsynonymous","N130T",1
"lib1","SARS-CoV-2","GACAACCAAATATGTA",1,5.05,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","C102S S113I E141H F156L",4
"lib1","SARS-CoV-2","GACAACCAAGGGTTTC",1,47.2,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C31G T63I N107M",3
"lib1","SARS-CoV-2","GACAACCAGATAAGCC",7,107.72,8.59,-2.17,0.09,2.93,1.03,0,">1 nonsynonymous","D97C Y119L",2
"lib1","SARS-CoV-2","GACAACCCAACCAATC",5,26.61,9.88,-0.89,0.12,2.67,1.04,0.01,">1 nonsynonymous","A22G K87W K114R",3
"lib1","SARS-CoV-2","GACAACCTCACGCGAG",5,36.93,9.83,-0.94,0.13,2.26,1.04,0.01,"1 nonsynonymous","F17A",1
"lib1","SARS-CoV-2","GACAACCTTAACAAAG",1,71.64,10.52,-0.25,0.05,2.95,1,0,"1 nonsynonymous","N58L",1
"lib1","SARS-CoV-2","GACAACGAATCTGTTT",5,19.51,6.14,-4.62,0.7,1.5,1.14,0.02,">1 nonsynonymous","K26Q V77K D112V",3
"lib1","SARS-CoV-2","GACAACGCTACGGGAA",1,5.87,10.21,-0.56,0.21,2.5,1.21,0.03,">1 nonsynonymous","Y93F K198E",2
"lib1","SARS-CoV-2","GACAACGGATGGAAAT",4,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R N64T R73I K87I A145N Y159N",6
"lib1","SARS-CoV-2","GACAACGGGCCATAAA",3,6.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N30W G74T T100S N110S C158K",5
"lib1","SARS-CoV-2","GACAACGTGATGCAAA",7,110.57,10.75,-0.01,0.07,2.9,1.05,0,"1 nonsynonymous","D98H",1
"lib1","SARS-CoV-2","GACAACTAAAACAGTA",6,191.35,10.51,-0.26,0.04,2.92,1.05,0,">1 nonsynonymous","G116T Q163S",2
"lib1","SARS-CoV-2","GACAACTAAGCCCCCT",5,115.53,10.73,-0.03,0.05,2.89,1.06,0,"1 nonsynonymous","K56G",1
"lib1","SARS-CoV-2","GACAACTAGTGTTTCG",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M A33Y R78H",3
"lib1","SARS-CoV-2","GACAACTCGTAGGGAC",1,15.94,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","G51T D98E V103D G166L",4
"lib1","SARS-CoV-2","GACAACTCTCGATAAG",5,3.63,NA,NA,NA,NA,NA,NA,"stop","Y35L F44Y R136* C158S",4
"lib1","SARS-CoV-2","GACAACTCTGGTAGGT",2,54.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31G Y165T",2
"lib1","SARS-CoV-2","GACAACTGAGTAACCG",5,5.85,NA,NA,NA,NA,NA,NA,"stop","F160N V173*",2
"lib1","SARS-CoV-2","GACAACTTAAAGACCA",3,16.87,6.76,-4.01,0.38,1.5,1.11,0.02,">1 nonsynonymous","S41K D97S F160S F167R H189L",5
"lib1","SARS-CoV-2","GACAACTTCCAGATAG",7,64.52,6.17,-4.59,0.55,1.5,1.13,0.01,">1 nonsynonymous","V20E I28R T100I F160K",4
"lib1","SARS-CoV-2","GACAACTTGTCGAGAT",4,98.73,10.61,-0.15,0.04,2.94,1,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","GACAACTTTCAATACT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","K87T E154L V180*",3
"lib1","SARS-CoV-2","GACAACTTTGTGATTA",4,55.99,10.79,0.03,0.07,2.97,1,0,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","GACAAGAAAAACCACA",1,55.12,8.97,-1.8,0.05,2.81,1.05,0,">1 nonsynonymous","S41V N157G",2
"lib1","SARS-CoV-2","GACAAGAACAGTAAGA",2,41.02,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6K Y50I T63E G86Y",4
"lib1","SARS-CoV-2","GACAAGAAGGATTAGA",7,103.62,10.63,-0.13,0.05,2.94,1.02,0,"1 nonsynonymous","Q163W",1
"lib1","SARS-CoV-2","GACAAGAAGTAAGGAG",2,69.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59V I88L C150T",3
"lib1","SARS-CoV-2","GACAAGAATTGTCTAT",1,82.29,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9N G51I Q176P",3
"lib1","SARS-CoV-2","GACAAGACACAAGATG",6,55.79,9.89,-0.88,0.09,2.2,1.03,0,">1 nonsynonymous","L57K T140L",2
"lib1","SARS-CoV-2","GACAAGACATAAAAAT",3,34.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2F F62W P82A D97S T170V Y175F",6
"lib1","SARS-CoV-2","GACAAGATAAATATTT",3,39.88,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","F44G T148S F167K P197E",4
"lib1","SARS-CoV-2","GACAAGATACATTGAC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib1","SARS-CoV-2","GACAAGATATTTGTTG",5,60.48,10.02,-0.75,0.07,2.52,1.01,0,">1 nonsynonymous","S41T N58L T100W",3
"lib1","SARS-CoV-2","GACAAGATGAGAGCAG",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69N G83D F99K",3
"lib1","SARS-CoV-2","GACAAGCCCCCACGCC",2,61.86,10.74,-0.03,0.08,2.95,1.02,0,"1 nonsynonymous","I138T",1
"lib1","SARS-CoV-2","GACAAGCTATTTTGAC",7,127.06,10.6,-0.16,0.04,2.93,1.03,0,">1 nonsynonymous","Q84H F160Y",2
"lib1","SARS-CoV-2","GACAAGCTGCAAATGA",1,30.92,8.71,-2.05,0.25,1.5,1.11,0.03,">1 nonsynonymous","V11H N107G T201K",3
"lib1","SARS-CoV-2","GACAAGGAACAGTCCA",7,120.5,10.73,-0.03,0.04,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GACAAGGACCAATTCA",5,22.34,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T55P W106Y Y123E E135I Q163K",5
"lib1","SARS-CoV-2","GACAAGGACCTGTACT",2,35.65,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A22V S29Q D68S T170L K198L",5
"lib1","SARS-CoV-2","GACAAGGAGAAGAAAC",5,43.07,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A81V Q84L W106P Y123V N157Y",5
"lib1","SARS-CoV-2","GACAAGGTACGTGCAA",5,5.56,8.48,-2.28,0.32,1.76,1.14,0.03,">1 nonsynonymous","D34I W106K L122V",3
"lib1","SARS-CoV-2","GACAAGGTTTTCTTGT",5,62.1,10.76,0,0.04,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAAGTAAAGAACTA",16,274.35,10.09,-0.67,0.06,2.28,1.01,0,">1 nonsynonymous","G51Y T201S",2
"lib1","SARS-CoV-2","GACAAGTATAAAGAGT",6,773.64,10.74,-0.03,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAAGTGCACACTCC",5,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K N13R V65Q K87T",4
"lib1","SARS-CoV-2","GACAAGTGTGATACAA",2,65.38,10.78,0.02,0.06,2.94,1.06,0,">1 nonsynonymous","K56M L95V S200V",3
"lib1","SARS-CoV-2","GACAAGTTAAATCAAC",2,30.27,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N4E G9A V32K T63S G172V",5
"lib1","SARS-CoV-2","GACAAGTTTGATGAAA",8,97.45,9.69,-1.08,0.07,2.58,1.08,0,">1 nonsynonymous","F47M C61V N107P",3
"lib1","SARS-CoV-2","GACAATAAAATAATCT",1,17.28,6.13,-4.63,1.05,1.5,1.2,0.05,">1 nonsynonymous","S129F F185N",2
"lib1","SARS-CoV-2","GACAATAAACGAAGTT",9,92.63,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F62V V77E S108N S147A F167E",5
"lib1","SARS-CoV-2","GACAATAAATTACTAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GACAATAAATTAGATA",6,100.54,6.2,-4.56,0.38,1.5,1.15,0.01,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","GACAATAACAAATTAC",4,32.55,10.8,0.04,0.05,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GACAATAACCTTGAAC",4,130.15,10.46,-0.3,0.06,2.91,1.03,0,">1 nonsynonymous","L38V P197G",2
"lib1","SARS-CoV-2","GACAATAAGAAGAAAA",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I C61Y I104L V182D",4
"lib1","SARS-CoV-2","GACAATAAGTCGAATT",7,6.49,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N1Y N13M A42L D68K V77R",5
"lib1","SARS-CoV-2","GACAATAATATACTGA",6,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A F47L R78F V181E",4
"lib1","SARS-CoV-2","GACAATAATGCTTGAT",3,23.79,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41L F62K Y91G W106T",4
"lib1","SARS-CoV-2","GACAATAATGTAACTG",2,20.32,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I80S Y119N S139K S147Q",4
"lib1","SARS-CoV-2","GACAATAATTACGACA",1,23.93,9.22,-1.54,0.11,2.65,1.12,0.01,">1 nonsynonymous","L122A E141V C158G",3
"lib1","SARS-CoV-2","GACAATACATAAACTA",3,59.6,10.47,-0.3,0.09,2.97,1,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","GACAATACCTACAAAC",8,0,NA,NA,NA,NA,NA,NA,"stop","N13L S41Y C49* L60M N109D",5
"lib1","SARS-CoV-2","GACAATACTTCAGAAA",4,88.06,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N40R G83C F99I I142T G152S",5
"lib1","SARS-CoV-2","GACAATAGGTCACATT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","I2R K48* C150M A192I",4
"lib1","SARS-CoV-2","GACAATAGTCGCGGCT",6,19.01,6,-4.76,0.32,3,1.09,0,">1 nonsynonymous","E10R C150W V173G",3
"lib1","SARS-CoV-2","GACAATAGTGCCGATA",4,0.93,NA,NA,NA,NA,NA,NA,"stop","V37M S129I E141Y F160* Q168H Q176L",6
"lib1","SARS-CoV-2","GACAATATGGAGCATA",4,7.96,10.42,-0.35,0.23,2.48,1,0.03,"1 nonsynonymous","V11D",1
"lib1","SARS-CoV-2","GACAATCAAATAGTGT",5,63.51,6.37,-4.39,0.65,1.5,1.24,0.02,">1 nonsynonymous","N107M Y119V Q163L",3
"lib1","SARS-CoV-2","GACAATCAAGCTCTAT",5,27.14,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P96L F160Y G174W",3
"lib1","SARS-CoV-2","GACAATCAATGCACAG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","G9* F99T D112L F160G T201D",5
"lib1","SARS-CoV-2","GACAATCACAGGCGCG",5,70.96,10.77,0.01,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAATCAGTCAAGGC",3,16.07,8.82,-1.94,0.24,1.63,1.04,0.04,">1 nonsynonymous","F17A Y119R F134Y L162I",4
"lib1","SARS-CoV-2","GACAATCATAACCAAA",1,25.15,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K26E C158E V181L",3
"lib1","SARS-CoV-2","GACAATCATCACACAA",6,197.58,10.78,0.02,0.05,2.91,1.05,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","GACAATCCGCAGCCCA",1,26.89,9,-1.77,0.35,1.63,1.26,0.05,">1 nonsynonymous","A81G I88T",2
"lib1","SARS-CoV-2","GACAATGACAAACATA",3,64.52,6.07,-4.69,1.03,1.5,1.21,0.03,">1 nonsynonymous","C6P Y39T Y165L",3
"lib1","SARS-CoV-2","GACAATGACAACTAGT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","V103* F167Y G174V",3
"lib1","SARS-CoV-2","GACAATGACGACTCAA",16,520.37,10.73,-0.04,0.05,2.87,1.06,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","GACAATGCATTACCAT",6,11.61,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","T63R Q84K F99P",3
"lib1","SARS-CoV-2","GACAATGCATTTATGA",17,207,6.24,-4.53,0.52,1.5,1.21,0.01,">1 nonsynonymous","G9N C158W",2
"lib1","SARS-CoV-2","GACAATGCGACACTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","A42T G117*",2
"lib1","SARS-CoV-2","GACAATGCTAGAAAAT",6,28.6,10.34,-0.43,0.2,2.48,1.18,0.01,"1 nonsynonymous","F12K",1
"lib1","SARS-CoV-2","GACAATGGCACATTTA",1,3.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63W",1
"lib1","SARS-CoV-2","GACAATGGCCTCAAAT",3,85.76,9.84,-0.92,0.09,2.78,1.03,0,">1 nonsynonymous","A42S F62G Y121L",3
"lib1","SARS-CoV-2","GACAATGTACCATGAC",4,51.7,10.17,-0.6,0.07,2.8,1.03,0,">1 nonsynonymous","Y121Q G174S",2
"lib1","SARS-CoV-2","GACAATTATGAAACGA",1,38.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F17W T46M A81V G117I G174C",5
"lib1","SARS-CoV-2","GACAATTCACGACCAA",3,77.53,9.99,-0.77,0.11,2.08,1.05,0,">1 nonsynonymous","L95C K114V",2
"lib1","SARS-CoV-2","GACAATTCATAGTCCA",11,86.12,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","I2V R16W R25I L38I I88T F99I N107Q",7
"lib1","SARS-CoV-2","GACAATTCATTTACTG",3,46.35,10.07,-0.69,0.04,2.92,1,0,">1 nonsynonymous","S43A N107R",2
"lib1","SARS-CoV-2","GACAATTCTTCCATGC",17,80.17,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I72K W106M Y121R T140S",4
"lib1","SARS-CoV-2","GACAATTGATATCAAA",4,21.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6P F99R G146S P149T",4
"lib1","SARS-CoV-2","GACAATTGTTTCGAGA",4,19.46,9.09,-1.68,0.27,1.79,1.07,0.04,">1 nonsynonymous","T63I P133L",2
"lib1","SARS-CoV-2","GACAATTTGTAGCAAG",1,5.7,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","L57G Y143L F156L G174E",4
"lib1","SARS-CoV-2","GACACAAAGCGCAAGA",9,1.68,NA,NA,NA,NA,NA,NA,"stop","N40Y L131G S164C T201*",4
"lib1","SARS-CoV-2","GACACAAATACATTCT",1,35.79,6.18,-4.58,1.04,1.5,1.21,0.04,">1 nonsynonymous","Y21C S29M S43I A89V",4
"lib1","SARS-CoV-2","GACACAAATCTAAAGC",1,9.69,6.21,-4.56,0.49,3,1.07,0.01,">1 nonsynonymous","I80G Q144K",2
"lib1","SARS-CoV-2","GACACAAATGGCAAAG",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L A14P F44C C49T P54S I104P",6
"lib1","SARS-CoV-2","GACACAACACGCAGAG",4,31.63,10.5,-0.26,0.07,2.9,1,0,"1 nonsynonymous","N13H",1
"lib1","SARS-CoV-2","GACACAACATTTAACG",6,49.17,8.09,-2.67,0.33,1.5,1,0.04,">1 nonsynonymous","Y91Q Y121S L122F",3
"lib1","SARS-CoV-2","GACACAACGATAAACT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","S43E C49* S113T",3
"lib1","SARS-CoV-2","GACACAACTTACCTAA",7,157.7,10.35,-0.41,0.06,2.78,1.02,0,">1 nonsynonymous","S41P D97W",2
"lib1","SARS-CoV-2","GACACAAGACGAAATT",3,18.03,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S29M L60F G86L",3
"lib1","SARS-CoV-2","GACACAAGTATTATTA",4,29.64,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F99R K128S",2
"lib1","SARS-CoV-2","GACACAATCATAAACA",2,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V S139A",2
"lib1","SARS-CoV-2","GACACAATGCAAATAC",4,68.9,10.85,0.08,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACACAAAGGCCAC",4,8.72,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V37A F44K I104Q",3
"lib1","SARS-CoV-2","GACACACCCATGATAA",4,41.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50I I88S",2
"lib1","SARS-CoV-2","GACACACGACAGATAA",6,3.77,NA,NA,NA,NA,NA,NA,"stop","R16E Y91S N130*",3
"lib1","SARS-CoV-2","GACACACTAATACATC",3,15.8,10.06,-0.71,0.17,1.86,1.15,0.02,">1 nonsynonymous","A42S L60R D90T G146A",4
"lib1","SARS-CoV-2","GACACAGAAAACAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68W G83F A105L T140R T148F E154T",6
"lib1","SARS-CoV-2","GACACAGAAATTGCAA",1,22.03,10.24,-0.52,0.12,2.71,1.06,0.01,">1 nonsynonymous","L5I P133T",2
"lib1","SARS-CoV-2","GACACAGAACGCGACA",2,57.99,10.61,-0.15,0.04,2.88,1.03,0,">1 nonsynonymous","V37R V65M S139K",3
"lib1","SARS-CoV-2","GACACAGAATGCCAAC",15,175.75,10.7,-0.07,0.05,2.89,1.05,0,">1 nonsynonymous","T55E D75Y",2
"lib1","SARS-CoV-2","GACACAGAGCTTTCAA",2,52.63,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Q84H Y143T C150F",3
"lib1","SARS-CoV-2","GACACAGCTAACCGCT",1,72.89,9.87,-0.89,0.07,2.72,1.04,0,">1 nonsynonymous","Q79K S147K",2
"lib1","SARS-CoV-2","GACACATACCGAATTC",4,62.84,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","P82A A105W L131C",3
"lib1","SARS-CoV-2","GACACATACCTAATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N30I T148*",2
"lib1","SARS-CoV-2","GACACATACTTAATCA",4,0,NA,NA,NA,NA,NA,NA,"stop","N58L E135G E141W N171*",4
"lib1","SARS-CoV-2","GACACATATAACAGCT",7,94.78,8.24,-2.53,0.19,2.02,1.14,0.01,">1 nonsynonymous","G9Y Y143R",2
"lib1","SARS-CoV-2","GACACATATTCAAATG",1,15.06,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","I88F P133L C158A",3
"lib1","SARS-CoV-2","GACACATCCCATACAT",3,97.68,9.39,-1.38,0.06,2.8,1.15,0,"1 nonsynonymous","Y119A",1
"lib1","SARS-CoV-2","GACACATCCTCGTAGA",1,107.03,10.36,-0.41,0.05,2.93,1.01,0,">1 nonsynonymous","F62A A145T",2
"lib1","SARS-CoV-2","GACACATCTTTAAAGG",4,14.4,10.04,-0.72,0.34,1.83,1,0.05,">1 nonsynonymous","V71A L122S Q144T K199N",4
"lib1","SARS-CoV-2","GACACATGAAGGTCAT",4,44.32,6,-4.76,1.68,3,1.12,0,">1 nonsynonymous","K26S F167C",2
"lib1","SARS-CoV-2","GACACATTAAGCGAGC",2,20.71,9.93,-0.84,0.1,2.62,1.06,0,">1 nonsynonymous","N13D N110D G155R",3
"lib1","SARS-CoV-2","GACACATTCAGATCAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","K56* V65L A81C C158V Y165W",5
"lib1","SARS-CoV-2","GACACATTTGGTTGTA",2,23.25,10.76,0,0.08,2.94,1.02,0,"1 nonsynonymous","N40T",1
"lib1","SARS-CoV-2","GACACCAAACACCAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","R124H Y143* F185Y",3
"lib1","SARS-CoV-2","GACACCAAACGGGCAT",2,12.14,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y50R K56R S129I Y165L",4
"lib1","SARS-CoV-2","GACACCAAACTTACAT",3,0.56,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","GACACCAAATACTGGT",1,12.82,9.98,-0.79,0.13,2.58,1.08,0.01,">1 nonsynonymous","C6Q A192Y",2
"lib1","SARS-CoV-2","GACACCAACTGATAAT",7,141.39,9.17,-1.6,0.06,2.71,1.1,0,"1 nonsynonymous","G146M",1
"lib1","SARS-CoV-2","GACACCAAGAATTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D98E E154K V173* P197A",4
"lib1","SARS-CoV-2","GACACCAATTATCCTC",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102L W106Q",2
"lib1","SARS-CoV-2","GACACCACCCTATCAG",5,25.62,10.69,-0.07,0.07,2.97,1,0,">1 nonsynonymous","I2Y E10A",2
"lib1","SARS-CoV-2","GACACCACCGTATTAG",1,18.62,6,-4.76,2,1.5,1.45,0.05,">1 nonsynonymous","S43V W106T S113N F126I",4
"lib1","SARS-CoV-2","GACACCACGCTAACCG",5,51.69,6.44,-4.33,0.51,1.5,1.16,0.01,">1 nonsynonymous","V20L C61R V115M Y119D",4
"lib1","SARS-CoV-2","GACACCACGCTTGAAG",3,32.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4L V11G Y91N",3
"lib1","SARS-CoV-2","GACACCATCTCATATA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","N13* C61D R179I",3
"lib1","SARS-CoV-2","GACACCATCTGACACA",1,27.2,10.21,-0.55,0.1,2.78,1.03,0.01,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","GACACCATCTTGTAAC",4,39.7,9.66,-1.11,0.05,2.92,1.07,0,"1 nonsynonymous","N118K",1
"lib1","SARS-CoV-2","GACACCATGAAATTCC",2,68.46,10.77,0.01,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACCCACATATCAC",3,21.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23E A42F Y50M F99L Y121V P133N",6
"lib1","SARS-CoV-2","GACACCCCAAAGAACC",7,116.15,10.71,-0.06,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACCCGATACTCAG",2,12.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R16K W23M T55C T100I I104P P149W",6
"lib1","SARS-CoV-2","GACACCCTGTCGCAGG",4,77.26,10.69,-0.07,0.04,2.92,1.01,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","GACACCGAAGCTATGA",1,5.78,10.8,0.04,0.22,2.77,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACACCGTACTTCAAC",10,129.32,6,-4.76,1.64,1.5,1.17,0.01,">1 nonsynonymous","R124L G172C",2
"lib1","SARS-CoV-2","GACACCTAAGCATTGC",1,15.6,10.58,-0.18,0.09,2.82,1.02,0,">1 nonsynonymous","F134Y E186P",2
"lib1","SARS-CoV-2","GACACCTACAAGCCCC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G74D",1
"lib1","SARS-CoV-2","GACACCTATGCACAGT",5,28.01,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","R78F V103P",2
"lib1","SARS-CoV-2","GACACCTCACATCCCA",4,56.07,10.8,0.03,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACCTCTTGAACCT",5,54.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10N W23M Y50T K94N",4
"lib1","SARS-CoV-2","GACACCTGCAATTCCT",4,78.74,9.74,-1.03,0.12,1.85,1.14,0.01,">1 nonsynonymous","C31R Y39K D90M",3
"lib1","SARS-CoV-2","GACACCTGCAGCCTTG",3,39.21,10.31,-0.46,0.04,2.9,1.01,0,"1 nonsynonymous","D34K",1
"lib1","SARS-CoV-2","GACACCTGCGTCTCAC",3,92.47,8.69,-2.08,0.08,2.97,1,0,"1 nonsynonymous","Y159V",1
"lib1","SARS-CoV-2","GACACCTTAACCCGAA",4,61.83,10.38,-0.39,0.04,2.86,1.03,0,">1 nonsynonymous","P96R L122M",2
"lib1","SARS-CoV-2","GACACCTTAATAAATG",3,29.24,9.44,-1.32,0.13,1.97,1.09,0.01,">1 nonsynonymous","R25K T55N",2
"lib1","SARS-CoV-2","GACACCTTGTGAAGTT",1,16.91,10.21,-0.56,0.09,2.4,1,0,">1 nonsynonymous","S41N P82R",2
"lib1","SARS-CoV-2","GACACGAAAGGGACTG",2,6.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N T15H I72S A105Q N157R S164R",6
"lib1","SARS-CoV-2","GACACGATAGAAAACA",1,38.37,6.16,-4.61,0.91,1.5,1.16,0.03,">1 nonsynonymous","V153S F167N",2
"lib1","SARS-CoV-2","GACACGATCACCGTAA",3,51.8,7.84,-2.92,0.27,1.61,1.12,0.02,">1 nonsynonymous","A14R I104M S113V K132H",4
"lib1","SARS-CoV-2","GACACGCACTTTAATG",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135K Y143N P149G",3
"lib1","SARS-CoV-2","GACACGCCAAGAAAAA",17,32.02,8.41,-2.36,0.41,1.5,1,0.08,">1 nonsynonymous","T46S C61F D98S K132M I138C V182S",6
"lib1","SARS-CoV-2","GACACGCGAATGAAGT",5,68.77,10.87,0.1,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACGGACCCATACG",4,82.44,10.06,-0.7,0.08,2.69,1.07,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","GACACGTAAAGAAGGC",1,25.07,10.69,-0.08,0.14,2.87,1.01,0.01,">1 nonsynonymous","T55D G83Y",2
"lib1","SARS-CoV-2","GACACGTATCAATTAT",6,38.47,8.68,-2.08,0.17,1.67,1.17,0.02,">1 nonsynonymous","D97F W106I L122W",3
"lib1","SARS-CoV-2","GACACGTCTTAGGAGC",2,12.7,6.6,-4.16,0.74,1.5,1.12,0.07,">1 nonsynonymous","C31W L57G A81G G166L",4
"lib1","SARS-CoV-2","GACACGTGAATACTGT",4,60.76,8.73,-2.04,0.13,1.77,1.13,0.01,">1 nonsynonymous","Y35E G152Y F160P",3
"lib1","SARS-CoV-2","GACACGTGTCATATGA",7,6.06,NA,NA,NA,NA,NA,NA,"stop","S41D D59* G174L",3
"lib1","SARS-CoV-2","GACACGTTAGCAAATA",9,34.71,6.19,-4.58,0.77,1.5,1.23,0.02,">1 nonsynonymous","F12E S108I",2
"lib1","SARS-CoV-2","GACACTAAAAAGAGGA",1,15.63,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12V Y50V",2
"lib1","SARS-CoV-2","GACACTAAAATCGCCG",9,60.93,9.69,-1.07,0.07,2.48,1.04,0,">1 nonsynonymous","C61V R127G",2
"lib1","SARS-CoV-2","GACACTAAAGCCGACT",11,0.88,NA,NA,NA,NA,NA,NA,"stop","P54R F126G R136S C158* Q168W",5
"lib1","SARS-CoV-2","GACACTAAAGGAGACT",3,72.88,10.6,-0.16,0.06,2.86,1.04,0,">1 nonsynonymous","A14N K132L",2
"lib1","SARS-CoV-2","GACACTAACCTGTAAT",7,145.23,10.6,-0.16,0.06,2.93,1.05,0,"1 nonsynonymous","G196N",1
"lib1","SARS-CoV-2","GACACTAAGCAAAAAT",5,21.58,8.71,-2.05,0.21,1.5,1.17,0.02,">1 nonsynonymous","C6N G51A T100K",3
"lib1","SARS-CoV-2","GACACTACGGATTACA",2,62.6,10.13,-0.63,0.07,2.5,1.06,0,">1 nonsynonymous","G51T Q84G E141Q",3
"lib1","SARS-CoV-2","GACACTAGTAGAAAGC",1,7.78,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","R27T G86S D97V N107F G172S",5
"lib1","SARS-CoV-2","GACACTAGTTACTGCT",3,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V A67F Y93I Y165C T201N",5
"lib1","SARS-CoV-2","GACACTATAACAATAG",2,27.32,10.05,-0.72,0.1,2.63,1.02,0.01,">1 nonsynonymous","N1Y N118A G196S",3
"lib1","SARS-CoV-2","GACACTATGTGAGGTT",2,33.88,10.7,-0.07,0.07,2.99,1,0,">1 nonsynonymous","C61A P197M",2
"lib1","SARS-CoV-2","GACACTCACATATCAT",7,5.86,NA,NA,NA,NA,NA,NA,"stop","N13* T55W G74T Y91* A105L",5
"lib1","SARS-CoV-2","GACACTCACTATAATG",2,78.35,10.55,-0.21,0.07,2.86,1.02,0,">1 nonsynonymous","S41P T46L K56E",3
"lib1","SARS-CoV-2","GACACTCACTGGCCAG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","L5* R16L R179V",3
"lib1","SARS-CoV-2","GACACTCAGTCTAATG",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y N130W G146L G152F",4
"lib1","SARS-CoV-2","GACACTCCACATGGAA",3,39.91,10.66,-0.11,0.05,2.92,1.03,0,">1 nonsynonymous","T100C P149I",2
"lib1","SARS-CoV-2","GACACTCCATTAACCT",4,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y S53K",2
"lib1","SARS-CoV-2","GACACTCCCTAATGGC",5,32.3,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P7I A14S C61D R73N Y123L E141S K199T",7
"lib1","SARS-CoV-2","GACACTCCTATAGGAG",2,21.32,6.45,-4.31,0.51,1.5,1.24,0.03,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","GACACTCGACCTTGTA",2,101.44,10.25,-0.52,0.05,2.87,1,0,">1 nonsynonymous","N40F V115F",2
"lib1","SARS-CoV-2","GACACTCGGGACCTAC",1,5.32,8.25,-2.51,0.44,2.06,1.19,0.06,">1 nonsynonymous","G86I I138L Y178S",3
"lib1","SARS-CoV-2","GACACTCGGGCGGATA",6,136.51,10.79,0.03,0.06,2.9,1.06,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","GACACTGAACACCGAA",5,73.35,10.66,-0.1,0.04,2.91,1,0,">1 nonsynonymous","F8M V37N",2
"lib1","SARS-CoV-2","GACACTGACTGCAGCC",3,42.24,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","K56V V77P P82E N130V",4
"lib1","SARS-CoV-2","GACACTGATTCATCAA",2,37.39,10.89,0.12,0.09,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GACACTGCCTCACACA",3,49.77,9.96,-0.81,0.29,1.55,1.08,0.04,">1 nonsynonymous","S29F E76Y",2
"lib1","SARS-CoV-2","GACACTGCGTAATAGT",3,19.38,9.86,-0.9,0.19,2.5,1.01,0.02,">1 nonsynonymous","C31Q Y39K",2
"lib1","SARS-CoV-2","GACACTGGATGCTCTA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","I72* F99E K128M",3
"lib1","SARS-CoV-2","GACACTGTAAAAGAGT",3,78.79,10.04,-0.73,0.08,2.59,1.01,0,">1 nonsynonymous","Y35S A89S",2
"lib1","SARS-CoV-2","GACACTTATGGATGAT",9,103.68,6,-4.76,1.65,1.84,1.14,0,">1 nonsynonymous","G9S N107T S113L R136T",4
"lib1","SARS-CoV-2","GACACTTCAATAATTA",8,93.52,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","I28V K56M G74R Y165L",4
"lib1","SARS-CoV-2","GACACTTGACAAAGAT",3,30.14,10.34,-0.43,0.07,2.92,1,0,">1 nonsynonymous","G9I S41M C61G",3
"lib1","SARS-CoV-2","GACAGAAAAGAAAGAA",1,38.58,6.07,-4.69,0.62,1.5,1.1,0.01,">1 nonsynonymous","C6G G51S Y165G G196T",4
"lib1","SARS-CoV-2","GACAGAAACTCTCAGG",10,144.09,8.59,-2.18,0.1,1.88,1.12,0,">1 nonsynonymous","F12Y G116A G174N",3
"lib1","SARS-CoV-2","GACAGAAACTTCACTA",4,75.73,6,-4.76,0.66,1.5,1.15,0.01,"1 nonsynonymous","G172F",1
"lib1","SARS-CoV-2","GACAGAAATTCAACTA",7,41.27,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V103K G174A",2
"lib1","SARS-CoV-2","GACAGAACAAGATAAG",10,169.36,6,-4.76,1.46,1.5,1.15,0.01,">1 nonsynonymous","R16S Y143P F156W",3
"lib1","SARS-CoV-2","GACAGAACAGGACGGA",2,78.68,10.83,0.07,0.06,2.85,1.11,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","GACAGAACCTATATCC",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95F S129L P177R",3
"lib1","SARS-CoV-2","GACAGAATACGGCAGC",2,28.68,10.28,-0.48,0.09,2.87,1.04,0,">1 nonsynonymous","I2V S29V T85K K94R S147K",5
"lib1","SARS-CoV-2","GACAGAATATGCAATA",2,104.74,10.09,-0.67,0.07,2.9,1.01,0,">1 nonsynonymous","N64Y Y143M",2
"lib1","SARS-CoV-2","GACAGACAAAAGTAAA",1,39.08,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","T3L G83L S113L N120V",4
"lib1","SARS-CoV-2","GACAGACAAACGCAAC",5,9.73,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","F12S V37N P54A N64Y R73W",5
"lib1","SARS-CoV-2","GACAGACAATAGCCAA",4,1.03,NA,NA,NA,NA,NA,NA,"stop","L5D R16*",2
"lib1","SARS-CoV-2","GACAGACACGTTATAT",4,47.25,9.05,-1.72,0.07,2.86,1.09,0,">1 nonsynonymous","N118E G166Q",2
"lib1","SARS-CoV-2","GACAGACATAGTTAGT",1,25.84,8.73,-2.04,0.23,1.72,1.14,0.03,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","GACAGACATCAAATCC",4,78.94,10.8,0.04,0.11,2.78,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGACATCATAAAG",3,26.48,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W23Q G51R N58G W106A L122Q",5
"lib1","SARS-CoV-2","GACAGACCATTTAGAT",8,103.68,6.5,-4.27,0.35,1.5,1.19,0.01,">1 nonsynonymous","N40R T46Y V71Q Q84K T201W",5
"lib1","SARS-CoV-2","GACAGACCCAAACTAT",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E N24W Y50W I80L K199Q",5
"lib1","SARS-CoV-2","GACAGACGATTAGATT",3,7.14,9.74,-1.03,0.16,1.77,1.12,0.01,"1 nonsynonymous","P82M",1
"lib1","SARS-CoV-2","GACAGACTGGCCTCAG",2,9.75,9.49,-1.28,0.19,2.43,1.08,0.02,">1 nonsynonymous","I2D L57E G146A",3
"lib1","SARS-CoV-2","GACAGAGAGACTCGGG",4,1.28,NA,NA,NA,NA,NA,NA,"stop","S113* N120L",2
"lib1","SARS-CoV-2","GACAGAGCCTCAGCTA",2,12.42,6.79,-3.97,0.56,1.81,1.15,0.04,">1 nonsynonymous","S41R F99A K128G P149G",4
"lib1","SARS-CoV-2","GACAGAGGAGAGTAAC",2,0.26,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib1","SARS-CoV-2","GACAGAGTATGGTCAC",9,1.57,NA,NA,NA,NA,NA,NA,"stop","K114R Y123S N130S F185* T201A",5
"lib1","SARS-CoV-2","GACAGAGTATTGTGTG",6,99.79,10.76,0,0.07,2.92,1.05,0,">1 nonsynonymous","G9N T55L",2
"lib1","SARS-CoV-2","GACAGAGTGCGAATGT",1,44.08,10.68,-0.09,0.08,2.98,1.02,0,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","GACAGATACTCAGCGG",2,72.31,10.04,-0.72,0.07,2.53,1,0,">1 nonsynonymous","C61R V77R",2
"lib1","SARS-CoV-2","GACAGATCATGCACGC",1,7.06,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C49Y G146S C158R",3
"lib1","SARS-CoV-2","GACAGATCCGAACCCA",10,47.17,6.13,-4.63,0.94,1.5,1.23,0.03,">1 nonsynonymous","C49G A89H D112A",3
"lib1","SARS-CoV-2","GACAGATTAAAACAAT",1,5.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55A R78K K94P P133T",4
"lib1","SARS-CoV-2","GACAGATTTCATTCAT",4,30.47,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","V103P N120G E154D",3
"lib1","SARS-CoV-2","GACAGATTTGTTTTAC",5,25.38,10.46,-0.3,0.07,2.85,1.1,0,">1 nonsynonymous","T3L G116K",2
"lib1","SARS-CoV-2","GACAGCAATCCCGACG",1,63.4,9.7,-1.06,0.14,2.01,1.05,0.01,">1 nonsynonymous","F17L C61M",2
"lib1","SARS-CoV-2","GACAGCAATCCCTAGC",11,84.17,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","N4R N40I N120V E135S G152K",5
"lib1","SARS-CoV-2","GACAGCAATGGATGAT",5,111.22,9.46,-1.3,0.15,1.72,1.12,0.01,">1 nonsynonymous","I28G V37L D98V G196I",4
"lib1","SARS-CoV-2","GACAGCACACTCTATG",4,0.35,NA,NA,NA,NA,NA,NA,"stop","K56* A81T Y91H",3
"lib1","SARS-CoV-2","GACAGCATGTTTGACA",11,60.44,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N4V G83H D90C F134L T140Q N157R G172L",7
"lib1","SARS-CoV-2","GACAGCCACAAATATT",4,1.02,NA,NA,NA,NA,NA,NA,"stop","D68L L95W V180*",3
"lib1","SARS-CoV-2","GACAGCCATCTATCCT",1,10.54,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","F44S Q84E T100P",3
"lib1","SARS-CoV-2","GACAGCCCGGATACCA",1,71.21,10.3,-0.47,0.1,2.53,1.01,0,">1 nonsynonymous","F99M K128H",2
"lib1","SARS-CoV-2","GACAGCCCGTTGGCCG",3,0.6,NA,NA,NA,NA,NA,NA,"stop","G86* E186T",2
"lib1","SARS-CoV-2","GACAGCCGCACCAATA",6,89.86,10.6,-0.17,0.05,2.9,1.05,0,">1 nonsynonymous","N64L I104L",2
"lib1","SARS-CoV-2","GACAGCCTCAGCCTTA",5,36.27,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8H L95Q",2
"lib1","SARS-CoV-2","GACAGCCTGACCTTAT",5,46.18,10.74,-0.02,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGCGCATAAGCCA",13,104.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2V G83E G86W Q176K",4
"lib1","SARS-CoV-2","GACAGCGCTTACTATC",1,19.99,10.41,-0.35,0.18,2.57,1.02,0.01,">1 nonsynonymous","G83M F134L N151S",3
"lib1","SARS-CoV-2","GACAGCGGAAACAGGG",3,24.03,7.24,-3.52,0.45,1.5,1.04,0.06,">1 nonsynonymous","S69E Y91E",2
"lib1","SARS-CoV-2","GACAGCTAAATCTCCT",8,59.46,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","GACAGCTAAATTGGAA",4,55.49,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F8G I88T F99T Y143H",4
"lib1","SARS-CoV-2","GACAGCTAATTTGACA",6,32.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S19Q S41R D90F S147A V181W",5
"lib1","SARS-CoV-2","GACAGCTATACGTGCC",2,29.64,10.05,-0.71,0.13,2.25,1.02,0.01,">1 nonsynonymous","T3I L38V D98S",3
"lib1","SARS-CoV-2","GACAGCTATTTTAGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9I A42S I72K N130V I138* T148L",6
"lib1","SARS-CoV-2","GACAGCTTAACACCGC",7,86.46,10.74,-0.03,0.06,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGCTTACAGGGAT",3,23.2,10.67,-0.1,0.09,2.91,1.05,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","GACAGGAAAAGCCCCT",8,0.35,NA,NA,NA,NA,NA,NA,"stop","A14L A22* Y121N P149Y",4
"lib1","SARS-CoV-2","GACAGGACAAACAAAG",4,51.12,6.28,-4.49,0.73,1.5,1.14,0.03,">1 nonsynonymous","Y50M T140G F167G",3
"lib1","SARS-CoV-2","GACAGGACACAATCCT",1,40.31,10.65,-0.12,0.09,2.92,1.04,0,"1 nonsynonymous","Q144E",1
"lib1","SARS-CoV-2","GACAGGACTAAAAAAA",4,121.05,10.3,-0.47,0.04,2.89,1.04,0,">1 nonsynonymous","N4V D59N V115P G155A",4
"lib1","SARS-CoV-2","GACAGGAGGTCCGAAA",2,84.8,10.26,-0.5,0.04,2.92,1.02,0,">1 nonsynonymous","G152H F156L",2
"lib1","SARS-CoV-2","GACAGGATGTGGCGAA",21,64.23,6.32,-4.44,0.72,1.5,1.2,0.04,">1 nonsynonymous","T3I G9Y Y50H T85I N92T",5
"lib1","SARS-CoV-2","GACAGGCACGGTTACT",7,88.16,8.29,-2.48,0.18,1.8,1.12,0.01,">1 nonsynonymous","I2L T55D P96E A145K",4
"lib1","SARS-CoV-2","GACAGGCAGTTAAACC",7,77.05,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N130L Q144I C158F",3
"lib1","SARS-CoV-2","GACAGGCCTAGGGTTC",5,110.66,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9S S29G C31Q Y39L S113V T140S Q176F",7
"lib1","SARS-CoV-2","GACAGGCGTATATGAA",6,1.54,NA,NA,NA,NA,NA,NA,"stop","A105P E141G P149* G155R L162Y",5
"lib1","SARS-CoV-2","GACAGGCTAAACAACT",1,48.05,10.52,-0.24,0.14,2.74,1.01,0.01,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","GACAGGCTCATAATCA",4,23.89,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T15Y Y50D S184I",3
"lib1","SARS-CoV-2","GACAGGGATTTAAAAT",1,26.91,7.74,-3.02,0.26,1.52,1.14,0.02,">1 nonsynonymous","V11D S29P N118V",3
"lib1","SARS-CoV-2","GACAGGGCAAGTCATT",2,44.91,10.21,-0.55,0.07,2.77,1.02,0,"1 nonsynonymous","C31F",1
"lib1","SARS-CoV-2","GACAGGGCGTCTCTTA",2,34.38,9.52,-1.24,0.17,1.84,1.06,0.01,">1 nonsynonymous","A14V P133I",2
"lib1","SARS-CoV-2","GACAGGGTCGAATTCC",2,51.29,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P82D N107W L131A C150G",4
"lib1","SARS-CoV-2","GACAGGTAGTATTAAC",3,5.95,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V103C G146Y",2
"lib1","SARS-CoV-2","GACAGGTCGTCCGAAA",1,2.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GACAGGTGAATATTAC",3,28.96,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A89Y D112S S200C",3
"lib1","SARS-CoV-2","GACAGGTGGTGCATAG",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121V V182W",2
"lib1","SARS-CoV-2","GACAGGTTAATCTCCT",5,2.38,NA,NA,NA,NA,NA,NA,"stop","A42T C61D D90F F99* V173E K199E",6
"lib1","SARS-CoV-2","GACAGGTTTAATCTTC",6,43.2,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","I2G G86P V103E",3
"lib1","SARS-CoV-2","GACAGTAAATAGGGCA",3,8.46,6,-4.76,2,3,1.23,0.06,">1 nonsynonymous","C6K V20L G83M A89T T140C",5
"lib1","SARS-CoV-2","GACAGTAAATGTACGC",5,28.4,6,-4.76,1.37,1.5,1.1,0.03,">1 nonsynonymous","C61E I72V D97M R127Q N157S H189D",6
"lib1","SARS-CoV-2","GACAGTAATAAACACC",6,156.64,10.08,-0.69,0.05,2.76,1.02,0,"1 nonsynonymous","L57C",1
"lib1","SARS-CoV-2","GACAGTAATATAACTC",4,103.17,6,-4.76,1.38,1.5,1.17,0.01,">1 nonsynonymous","F44K K87E S139W Q176K",4
"lib1","SARS-CoV-2","GACAGTACACGCTGCA",7,70.25,10.74,-0.03,0.11,2.79,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGTAGAGACCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* D112F F134S E141S",4
"lib1","SARS-CoV-2","GACAGTAGTAGATTAT",6,130.38,10.12,-0.64,0.08,2.57,1,0,">1 nonsynonymous","A14I A89S",2
"lib1","SARS-CoV-2","GACAGTATACATGCAG",4,54.29,10.58,-0.18,0.04,2.91,1.05,0,">1 nonsynonymous","I28V S43Y N64Y",3
"lib1","SARS-CoV-2","GACAGTATACCCGAAT",2,76.75,10.19,-0.57,0.06,2.93,1.02,0,">1 nonsynonymous","D97I Y119R",2
"lib1","SARS-CoV-2","GACAGTATCGGAGCTG",1,9.18,6.78,-3.99,0.35,1.5,1.08,0.02,">1 nonsynonymous","T46C K56T P82V W106D C150Y",5
"lib1","SARS-CoV-2","GACAGTCAATCGTCGG",8,240.09,10.16,-0.6,0.04,2.91,1.02,0,">1 nonsynonymous","T100R N120F L125W",3
"lib1","SARS-CoV-2","GACAGTCATAACGATC",1,51.25,10.64,-0.12,0.07,2.84,1.08,0,">1 nonsynonymous","I104C K128H",2
"lib1","SARS-CoV-2","GACAGTCATCGAAGGC",2,63.24,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A89V N120K G152D P161L",4
"lib1","SARS-CoV-2","GACAGTCCGCCGGCAA",13,201.73,9.77,-1,0.08,1.97,1.07,0,">1 nonsynonymous","F47N C61L",2
"lib1","SARS-CoV-2","GACAGTCGCGATGATG",3,47.15,10.72,-0.05,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGTCGGACGCTTG",5,131.04,10.7,-0.07,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACAGTCTATTTATAA",2,18.23,7.07,-3.7,0.31,1.5,1.17,0.02,">1 nonsynonymous","F12Y S43V G155F",3
"lib1","SARS-CoV-2","GACAGTGAGGACTGTT",2,64.18,9.38,-1.38,0.05,2.82,1.12,0,"1 nonsynonymous","E154F",1
"lib1","SARS-CoV-2","GACAGTGCCGTTAACC",1,3.21,NA,NA,NA,NA,NA,NA,"stop","N1D A18*",2
"lib1","SARS-CoV-2","GACAGTGGCCAACCCA",13,154.88,10.49,-0.27,0.05,2.86,1.02,0,">1 nonsynonymous","R136L L187K",2
"lib1","SARS-CoV-2","GACAGTGGTCTACGCA",13,98.12,6.07,-4.69,0.69,1.5,1.16,0.01,">1 nonsynonymous","V77P Y143L",2
"lib1","SARS-CoV-2","GACAGTGTTCTCCCCA",1,31.82,10.41,-0.36,0.06,2.9,1,0,">1 nonsynonymous","G83Y D98Y K199H",3
"lib1","SARS-CoV-2","GACAGTTAAAACTTGT",2,0.45,NA,NA,NA,NA,NA,NA,"stop","D97* D112M R127I",3
"lib1","SARS-CoV-2","GACAGTTAATATGTGA",3,9.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114G L125K S139F G166H",4
"lib1","SARS-CoV-2","GACAGTTCAGAAGTAA",6,28.24,8.72,-2.05,0.44,1.5,1.08,0.06,">1 nonsynonymous","I2G K48P",2
"lib1","SARS-CoV-2","GACAGTTTAAACCGAT",3,102.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7C D97V T148A P177L",4
"lib1","SARS-CoV-2","GACAGTTTTCTAAGGA",2,10.22,8.06,-2.71,0.46,1.5,1.08,0.07,">1 nonsynonymous","N40P T63R K94R G116P P169C",5
"lib1","SARS-CoV-2","GACATAAAAAATTGAA",1,20.55,10.32,-0.44,0.13,2.46,1,0.01,">1 nonsynonymous","A42E K94M",2
"lib1","SARS-CoV-2","GACATAAAAATATAAC",4,21.69,10.85,0.09,0.11,2.94,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACATAAAACGTTAAC",3,38.56,9.04,-1.73,0.09,2.73,1.17,0,">1 nonsynonymous","L38M E141R T170G",3
"lib1","SARS-CoV-2","GACATAAACCTAAACC",2,29.21,6.35,-4.41,0.51,1.5,1.15,0.02,">1 nonsynonymous","V37W P161L A190N",3
"lib1","SARS-CoV-2","GACATAAAGTAGCAAT",3,59.23,6.1,-4.67,0.83,1.5,1.17,0.02,">1 nonsynonymous","N4Y R16S K48A A105Y S113I",5
"lib1","SARS-CoV-2","GACATAAATTTAACGG",5,88.09,10.59,-0.18,0.1,2.87,1.04,0,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","GACATAACATTAGAGT",5,4.63,NA,NA,NA,NA,NA,NA,"stop","S19* Y35K S45A A89R G172Y",5
"lib1","SARS-CoV-2","GACATAACCTCAAGAA",2,40.78,10.2,-0.56,0.05,2.64,1.03,0,">1 nonsynonymous","A42K L131F",2
"lib1","SARS-CoV-2","GACATAACGACACCCT",5,149.94,10.78,0.02,0.04,2.95,1.02,0,"1 nonsynonymous","I138V",1
"lib1","SARS-CoV-2","GACATAATAACCCTAC",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124L S129N",2
"lib1","SARS-CoV-2","GACATAATAATTCAAT",2,9.92,10.25,-0.51,0.16,2.86,1.05,0.01,">1 nonsynonymous","I2T K56I P149I V173L",4
"lib1","SARS-CoV-2","GACATAATACTGTACT",4,66.06,10.81,0.05,0.11,2.9,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GACATAATCGAACTAT",3,49.92,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9R R25I D59W G86W",4
"lib1","SARS-CoV-2","GACATAATGTGAATCT",13,196.07,10.76,0,0.05,2.93,1.01,0,">1 nonsynonymous","S147F N151K",2
"lib1","SARS-CoV-2","GACATAATTGCGATAG",4,2.01,NA,NA,NA,NA,NA,NA,"stop","F44G D68M R73G P82L N92* L122S T201N",7
"lib1","SARS-CoV-2","GACATACACAAGCTTA",5,1.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","GACATACACTTTGGAT",4,0.71,NA,NA,NA,NA,NA,NA,"stop","C61* N120F",2
"lib1","SARS-CoV-2","GACATACAGAATCAAG",4,38.84,10.84,0.08,0.1,2.9,1.07,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","GACATACAGGTACATG",3,20.71,10.58,-0.19,0.06,2.91,1.07,0,"1 nonsynonymous","S43E",1
"lib1","SARS-CoV-2","GACATACCAAACGACT",5,12.79,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6I R25F D98L",3
"lib1","SARS-CoV-2","GACATACCAAGATTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D97* I138Y L188S",3
"lib1","SARS-CoV-2","GACATACCAGCTCAGG",2,17.42,8.55,-2.21,0.4,1.5,1.12,0.05,">1 nonsynonymous","E10M T46D K56P",3
"lib1","SARS-CoV-2","GACATACCCTCCACTT",4,58.26,10.81,0.04,0.06,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GACATACCTTGCTCTT",2,67.72,8.93,-1.84,0.04,2.76,1.09,0,">1 nonsynonymous","L5Q Y119W Y178N",3
"lib1","SARS-CoV-2","GACATACGGTAATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* C49N",2
"lib1","SARS-CoV-2","GACATACTAAACTGCC",1,9.51,10.37,-0.4,0.09,2.91,1.02,0.01,">1 nonsynonymous","G155Q V173W",2
"lib1","SARS-CoV-2","GACATACTCCGCTTTG",1,9.16,10.66,-0.1,0.09,2.94,1.05,0.01,">1 nonsynonymous","N110E N120L",2
"lib1","SARS-CoV-2","GACATACTTTACGGCG",5,59.66,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A145N Y165A",2
"lib1","SARS-CoV-2","GACATAGAAACAAAGT",5,2.38,NA,NA,NA,NA,NA,NA,"stop","C6Y P96G G116* K198L",4
"lib1","SARS-CoV-2","GACATAGAACAGTTTC",4,35.55,8.59,-2.17,0.13,2.98,1.03,0.01,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","GACATAGACCAATCAC",3,13.43,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D97Q V103Y D112F T148M H189N S200T",6
"lib1","SARS-CoV-2","GACATAGATATCCGAA",1,14.71,10.65,-0.11,0.09,2.85,1.1,0,">1 nonsynonymous","T100I T148N T201V",3
"lib1","SARS-CoV-2","GACATAGATGCAAACC",2,34.17,6.13,-4.63,0.59,1.5,1.21,0.01,">1 nonsynonymous","A14C V77L Y91S D112M K198Q",5
"lib1","SARS-CoV-2","GACATAGCAACCCAGG",1,13.55,6.56,-4.2,0.56,3,1.09,0.01,">1 nonsynonymous","F12L N92V",2
"lib1","SARS-CoV-2","GACATAGCAATGACTC",1,6.18,10.43,-0.34,0.09,3,1.03,0,"1 nonsynonymous","K48Y",1
"lib1","SARS-CoV-2","GACATAGCAGTATACA",6,0.33,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","GACATAGCTGTCCCCT",5,71.77,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6S A22V F44C T201M",4
"lib1","SARS-CoV-2","GACATAGCTTAGTGCT",7,151,9.88,-0.88,0.08,2.08,1.03,0,">1 nonsynonymous","R27V N40Y V103I S129W",4
"lib1","SARS-CoV-2","GACATAGGCCCAACAA",2,12.89,9.79,-0.97,0.19,2.03,1.13,0.02,">1 nonsynonymous","C49V Q163G",2
"lib1","SARS-CoV-2","GACATAGTCTAAAGAT",6,41.4,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","I80P K94I K132S P197Q",4
"lib1","SARS-CoV-2","GACATAGTTTTGAGAA",4,178.46,9.29,-1.47,0.06,2.84,1.09,0,">1 nonsynonymous","Y119D P197L",2
"lib1","SARS-CoV-2","GACATATAACTAAGAA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","S19* L57Y",2
"lib1","SARS-CoV-2","GACATATAATAACTAA",1,13.29,9.18,-1.58,0.25,2.44,1.12,0.02,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","GACATATATTTTGATG",7,74.91,10.8,0.04,0.11,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACATATCGACAGTAA",1,38.43,10.17,-0.59,0.07,2.81,1.09,0,"1 nonsynonymous","C102I",1
"lib1","SARS-CoV-2","GACATATCGCATATCT",4,121.56,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28P T63P F70M",3
"lib1","SARS-CoV-2","GACATATCTCCCAAAA",10,54.87,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N64Y I104Q Y143P",3
"lib1","SARS-CoV-2","GACATATGACAGTGTG",1,23.21,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","S41N P82M F134T Q144R T148P F156P",6
"lib1","SARS-CoV-2","GACATATTAATCAACG",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42W N58L G83H D98V",4
"lib1","SARS-CoV-2","GACATATTATATAATA",2,56.67,8.1,-2.67,0.21,1.8,1.14,0.02,">1 nonsynonymous","N58T L122K Q176F",3
"lib1","SARS-CoV-2","GACATATTTCAAACCT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","Y35R T63*",2
"lib1","SARS-CoV-2","GACATCAAAAAATGCT",2,8.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51C I142S",2
"lib1","SARS-CoV-2","GACATCAACACCAAGT",4,18.69,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N64V G86F S113K V182L",4
"lib1","SARS-CoV-2","GACATCAACTTGAACC",6,56.59,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","V11C D59N T85R N92L T100S P149V G155H T170S T201Y",9
"lib1","SARS-CoV-2","GACATCACAGCTAAGG",4,11.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8A C102M V182E",3
"lib1","SARS-CoV-2","GACATCACGTGACACG",3,0.44,NA,NA,NA,NA,NA,NA,"stop","L5W T63H L95* T100H E154S",5
"lib1","SARS-CoV-2","GACATCACTTGCAGCA",4,50.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L122R Q144V Y165A V173G V181T",5
"lib1","SARS-CoV-2","GACATCAGCTAAAAGT",4,40.77,10.8,0.04,0.08,2.88,1.09,0,">1 nonsynonymous","V77L K198R",2
"lib1","SARS-CoV-2","GACATCAGCTACTCCA",4,184.83,10.66,-0.11,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GACATCAGTAGTGACC",1,0.25,NA,NA,NA,NA,NA,NA,"stop","Y21* Y35R N64M K87Y N120F",5
"lib1","SARS-CoV-2","GACATCAGTCACGCTA",4,58.41,10.68,-0.08,0.13,2.74,1,0.01,">1 nonsynonymous","R16E N40R K56A P149H",4
"lib1","SARS-CoV-2","GACATCATCAGGACTT",4,14.57,8.05,-2.72,0.52,1.51,1.09,0.08,">1 nonsynonymous","A14H A42D N64E E76R",4
"lib1","SARS-CoV-2","GACATCATTATACGGA",1,13.11,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P7G C49R I104L",3
"lib1","SARS-CoV-2","GACATCATTGATAACA",3,61.8,10.83,0.07,0.09,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACATCATTTTAGACA",4,107.76,10.68,-0.09,0.05,2.91,1.03,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","GACATCCAGCTACCTA",1,10.75,9.94,-0.83,0.08,3,1,0,">1 nonsynonymous","T3K V11Y T201A",3
"lib1","SARS-CoV-2","GACATCCATACGAGAG",1,52.07,6,-4.76,2,1.5,1.41,0.05,">1 nonsynonymous","S45M T63P Q176R P191L",4
"lib1","SARS-CoV-2","GACATCCCAAATCATG",10,144.29,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R124C T148E",2
"lib1","SARS-CoV-2","GACATCCCAGCACTAT",3,60.89,10.67,-0.1,0.05,2.98,1,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","GACATCCGGTAACCAT",3,1.99,NA,NA,NA,NA,NA,NA,"stop","W23A V65A L125E F167Y Y175*",5
"lib1","SARS-CoV-2","GACATCCTAGAGGGGG",9,117.48,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","S36V N64L W106C",3
"lib1","SARS-CoV-2","GACATCCTGAAGCAAA",1,0.35,NA,NA,NA,NA,NA,NA,"stop","L60P P149* G174R",3
"lib1","SARS-CoV-2","GACATCGAAGAATGAT",5,99.05,8.62,-2.14,0.05,2.48,1.06,0,">1 nonsynonymous","S45F Y119V",2
"lib1","SARS-CoV-2","GACATCGAATCGCAAG",1,7.08,6,-4.76,2,3,1.02,0,">1 nonsynonymous","F17V L95P N107R P149F",4
"lib1","SARS-CoV-2","GACATCGCATATATGT",8,74.21,9.51,-1.25,0.07,1.9,1.08,0,">1 nonsynonymous","N1L A89P D98Y",3
"lib1","SARS-CoV-2","GACATCGCGATAACTG",7,82.56,8.04,-2.73,0.3,1.5,1,0.04,">1 nonsynonymous","A14T G86Q L187R",3
"lib1","SARS-CoV-2","GACATCGTGAAAAATT",2,23.65,8.21,-2.55,0.24,1.5,1.07,0.02,">1 nonsynonymous","V37F Y91M D137N N151S",4
"lib1","SARS-CoV-2","GACATCTAAGGAAACT",15,3.87,NA,NA,NA,NA,NA,NA,"stop","Y39T V71* N118L P149E G166K",5
"lib1","SARS-CoV-2","GACATCTATTCACTAT",2,541.84,10.03,-0.74,0.06,2.77,1.01,0,">1 nonsynonymous","L5V I72L Q79C",3
"lib1","SARS-CoV-2","GACATCTCAATAAACT",2,45.32,8.79,-1.97,0.16,2.09,1.09,0.02,">1 nonsynonymous","P54R N107I",2
"lib1","SARS-CoV-2","GACATCTGACTTTCCT",1,2.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182M",1
"lib1","SARS-CoV-2","GACATCTGCAAGACAA",10,70.62,6.16,-4.6,0.87,1.5,1.15,0.03,">1 nonsynonymous","C61L F70Y K87V N107L P149A E154M",6
"lib1","SARS-CoV-2","GACATCTGGGGGGATT",2,37.13,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A89P W106G F167Y G174N",4
"lib1","SARS-CoV-2","GACATCTTAAAAATAT",1,42.3,8.73,-2.03,0.09,2.85,1.16,0,">1 nonsynonymous","S53T Y159L",2
"lib1","SARS-CoV-2","GACATCTTCACGCGGT",2,10.78,10.4,-0.36,0.51,2,1,0.06,">1 nonsynonymous","G86V F185K",2
"lib1","SARS-CoV-2","GACATGAACCAGCGAT",2,8.6,10.47,-0.29,0.14,2.82,1.05,0.01,">1 nonsynonymous","A14N P149Y",2
"lib1","SARS-CoV-2","GACATGAACGAGAAAT",2,37.13,9.82,-0.95,0.2,1.75,1.05,0.02,">1 nonsynonymous","Y35T S69W",2
"lib1","SARS-CoV-2","GACATGAACTATGTTA",2,16.74,6,-4.76,2,1.5,1.29,0.05,"1 nonsynonymous","P177Y",1
"lib1","SARS-CoV-2","GACATGAATAAGGCAG",3,77.62,10.78,0.01,0.06,2.97,1.01,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","GACATGACTAAAGTAA",5,200.91,10.75,-0.01,0.04,2.91,1.04,0,"1 nonsynonymous","V32L",1
"lib1","SARS-CoV-2","GACATGAGATATTTAA",7,37.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82T W106V",2
"lib1","SARS-CoV-2","GACATGAGGCTTGTGC",7,24.49,10.08,-0.68,0.18,1.68,1.11,0.01,">1 nonsynonymous","T3M N171Q F185P",3
"lib1","SARS-CoV-2","GACATGAGTTACAGTC",1,23.31,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12K S45I G86R F167R",4
"lib1","SARS-CoV-2","GACATGATATACAAAA",9,42.61,10.22,-0.54,0.06,2.95,1,0,">1 nonsynonymous","C6D A33G",2
"lib1","SARS-CoV-2","GACATGCAATTACAAT",4,64.54,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P96D D112G N130S S200V",4
"lib1","SARS-CoV-2","GACATGCACCCAATTC",2,72.29,9.84,-0.92,0.11,2.37,1.09,0,">1 nonsynonymous","C61L D75W P197N",3
"lib1","SARS-CoV-2","GACATGCATTATCCAC",8,146.05,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25T A145L L162S",3
"lib1","SARS-CoV-2","GACATGCCCATGAATA",5,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W Y93S",2
"lib1","SARS-CoV-2","GACATGCTAGCCAAAA",4,64.28,9.29,-1.47,0.15,1.86,1.11,0.01,">1 nonsynonymous","F17L L57I",2
"lib1","SARS-CoV-2","GACATGCTCACTAGTA",3,12.03,9.85,-0.91,0.1,2.8,1.02,0.01,">1 nonsynonymous","E10D N107R K198L",3
"lib1","SARS-CoV-2","GACATGGAACAAATAT",3,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P R73P F99V A145L",4
"lib1","SARS-CoV-2","GACATGGCAAGAAAGG",7,94.45,7.81,-2.95,0.24,1.5,1.09,0.02,">1 nonsynonymous","V11G S53R A105S N110S E141G P197Q",6
"lib1","SARS-CoV-2","GACATGGCTATTGCCT",1,6.43,10.59,-0.18,0.08,2.82,1.16,0,">1 nonsynonymous","Y35M G116P",2
"lib1","SARS-CoV-2","GACATGGCTCACTATG",2,5.03,NA,NA,NA,NA,NA,NA,"stop","A18* N92S",2
"lib1","SARS-CoV-2","GACATGGGAATTCAAC",3,27.57,6.69,-4.07,0.7,1.5,1.15,0.05,">1 nonsynonymous","Y21E K26R Y35A I72M K94Q T201W",6
"lib1","SARS-CoV-2","GACATGGTTAAATACT",2,16.4,10.18,-0.58,0.21,1.62,1.12,0.04,">1 nonsynonymous","T3C S139F S200I",3
"lib1","SARS-CoV-2","GACATGTACCGACCGA",10,163.35,9.55,-1.21,0.06,2.82,1.07,0,">1 nonsynonymous","Y39L F126I E141V",3
"lib1","SARS-CoV-2","GACATGTCACATGACA",1,15.85,9.9,-0.87,0.09,2.82,1,0.01,">1 nonsynonymous","V77M S139A",2
"lib1","SARS-CoV-2","GACATGTCGATACCTT",6,29.95,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","P96S W106G",2
"lib1","SARS-CoV-2","GACATGTTGTAACAGC",1,10.51,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21M F44K G74M G83D A89D N120T V181R",7
"lib1","SARS-CoV-2","GACATTAAAAATGGAT",6,30.94,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D112R T140I G174R",3
"lib1","SARS-CoV-2","GACATTAAATCGAAAA",9,42.93,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","S53Y D90P T148K",3
"lib1","SARS-CoV-2","GACATTAAATTATCAA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","K48R Y66R I104P L125V S139F T148*",6
"lib1","SARS-CoV-2","GACATTAAGCTCGCCT",2,1.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83H",1
"lib1","SARS-CoV-2","GACATTAATATCCAAC",9,254.39,9.95,-0.82,0.05,2.89,1.06,0,">1 nonsynonymous","V37S Y119K",2
"lib1","SARS-CoV-2","GACATTAATCTTCAAT",3,8.02,NA,NA,NA,NA,NA,NA,"stop","Y50K A81I L187*",3
"lib1","SARS-CoV-2","GACATTAATTCTTAAC",1,62.88,10.25,-0.52,0.04,2.94,1,0,">1 nonsynonymous","P149F G155T",2
"lib1","SARS-CoV-2","GACATTACGACTTATA",1,41.03,10.54,-0.23,0.09,2.83,1.02,0,"1 nonsynonymous","N24C",1
"lib1","SARS-CoV-2","GACATTAGACAATCTA",2,20.62,6.49,-4.28,0.54,1.5,1.09,0.03,">1 nonsynonymous","A89R Y143M T148P F156D",4
"lib1","SARS-CoV-2","GACATTAGTGACTTGA",6,40.5,10.83,0.07,0.06,2.94,1.03,0,">1 nonsynonymous","F8W T63R N151K",3
"lib1","SARS-CoV-2","GACATTATACCAGGAA",2,26.6,8.67,-2.09,0.31,2.02,1.01,0.03,">1 nonsynonymous","A14L Y35W Y121T",3
"lib1","SARS-CoV-2","GACATTATATTATGAC",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L V20E A42G S53L",4
"lib1","SARS-CoV-2","GACATTATCATAGCTA",7,58.56,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N30A L60P P96H V153K V180F",5
"lib1","SARS-CoV-2","GACATTCAATCGTTTG",1,9.69,8.41,-2.35,0.43,1.5,1.2,0.05,">1 nonsynonymous","D68M D98N I138H",3
"lib1","SARS-CoV-2","GACATTCAGAGTTACC",3,32.68,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K56A T63I A81M C102M Y119S V182F P191L",7
"lib1","SARS-CoV-2","GACATTCATCCTTCTA",4,89.69,10.28,-0.49,0.04,2.85,1.01,0,">1 nonsynonymous","Y35K K56E K114R",3
"lib1","SARS-CoV-2","GACATTCCCAAGTTCG",2,40.52,8.53,-2.24,0.4,1.5,1,0.06,">1 nonsynonymous","G86E L122C",2
"lib1","SARS-CoV-2","GACATTCCGGGGATCC",3,28.46,10.32,-0.44,0.07,2.92,1,0,">1 nonsynonymous","D75R P149F",2
"lib1","SARS-CoV-2","GACATTCCGTGAACGT",4,23.43,6.37,-4.4,0.22,1.5,1.11,0,">1 nonsynonymous","F8R N13L K56L L162S Q176V",5
"lib1","SARS-CoV-2","GACATTCGAACGATCG",1,59.08,10.74,-0.03,0.06,2.9,1.06,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","GACATTCTAGGACAAC",11,109.32,10.14,-0.62,0.05,2.94,1,0,">1 nonsynonymous","C6V V37L",2
"lib1","SARS-CoV-2","GACATTCTGGGATTTG",5,10.32,9.15,-1.61,0.32,1.54,1.33,0.05,">1 nonsynonymous","N1L C6S R27I A67F Q144D",5
"lib1","SARS-CoV-2","GACATTCTTCCTATGA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","A33M K48* S129L F160T",4
"lib1","SARS-CoV-2","GACATTGAAGATTTTC",2,4.85,NA,NA,NA,NA,NA,NA,"stop","G116D R127* S164V S200L",4
"lib1","SARS-CoV-2","GACATTGACGGACATT",3,21.64,10.37,-0.4,0.1,2.78,1.09,0,">1 nonsynonymous","D98C I104L",2
"lib1","SARS-CoV-2","GACATTGAGACCCAAA",3,25.14,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S41R V71G L95S V115K",4
"lib1","SARS-CoV-2","GACATTGATAAAAAAA",3,127.13,10.01,-0.76,0.07,2.16,1.06,0,">1 nonsynonymous","K48R D90G S129N G196V",4
"lib1","SARS-CoV-2","GACATTGATAAGAATT",5,70.69,10.7,-0.06,0.07,2.84,1.05,0,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","GACATTGCTCACCGGC",3,58.9,8.64,-2.12,0.11,2.6,1.06,0.01,">1 nonsynonymous","R127A Q168V",2
"lib1","SARS-CoV-2","GACATTGGCATGTCAG",2,21.67,8.78,-1.99,0.18,1.78,1.16,0.01,">1 nonsynonymous","N13M Y35T N118Q",3
"lib1","SARS-CoV-2","GACATTGTATACACTT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91H I138W N171P",3
"lib1","SARS-CoV-2","GACATTGTGAGAAAAT",2,28.39,10.89,0.12,0.12,2.82,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACATTGTGCCGCGTT",2,9.8,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3I C49Y C102P S164C",4
"lib1","SARS-CoV-2","GACATTGTGCTGTCTA",7,93.91,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S45V C49N G174N R179P",4
"lib1","SARS-CoV-2","GACATTGTTTGGAAAG",1,12.13,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N58S A81V A89R G146L",4
"lib1","SARS-CoV-2","GACATTTAACGACTAA",1,83.4,9.81,-0.96,0.09,1.94,1.08,0,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","GACATTTAGTTACATG",5,9.42,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N4S F62S K87N F99N",4
"lib1","SARS-CoV-2","GACATTTATTCCTTAC",2,0.59,NA,NA,NA,NA,NA,NA,"stop","L5P G166*",2
"lib1","SARS-CoV-2","GACATTTCAAAACTAA",3,88.16,10.12,-0.64,0.09,2.6,1.1,0,">1 nonsynonymous","N58R T63K D90Y E154R",4
"lib1","SARS-CoV-2","GACATTTCTATGGACC",4,55.69,10.86,0.1,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACATTTCTGTGATAT",1,12.35,7.03,-3.73,0.55,1.5,1.25,0.05,">1 nonsynonymous","C31P Y91A T100A F134E P177R",5
"lib1","SARS-CoV-2","GACATTTGATGAAACG",4,0.45,NA,NA,NA,NA,NA,NA,"stop","R27N G86* T170Y",3
"lib1","SARS-CoV-2","GACATTTGTATTATGA",4,77.33,8.9,-1.87,0.09,1.84,1.13,0,">1 nonsynonymous","Y50I G155E",2
"lib1","SARS-CoV-2","GACATTTTCATAGAAT",1,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D34S T55S A89Q A105R Q176H",6
"lib1","SARS-CoV-2","GACCAAAAACACGATT",11,1.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C195Y",1
"lib1","SARS-CoV-2","GACCAAAAATAGTACA",3,46.39,9.9,-0.86,0.12,2.63,1.12,0,">1 nonsynonymous","V77L Y178C S184Y S200K",4
"lib1","SARS-CoV-2","GACCAAAACAATGCTA",1,18.74,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K56Q P96N L122Q G172Y",4
"lib1","SARS-CoV-2","GACCAAAACGTTCCCG",10,71.93,10.52,-0.25,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCAAAATCCACAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39L K87* G155P",3
"lib1","SARS-CoV-2","GACCAAACAAATACGG",4,59.6,10.84,0.07,0.08,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCAAACACATAAAA",2,19.89,10.68,-0.09,0.15,2.78,1.13,0.01,"1 nonsynonymous","N130S",1
"lib1","SARS-CoV-2","GACCAAACACCAACCG",2,9.5,6.11,-4.65,2,1.5,1.21,0.03,">1 nonsynonymous","S29M Y35R G51H T55L F62G R179L",6
"lib1","SARS-CoV-2","GACCAAACGAGCCACA",7,26.4,7.06,-3.71,0.27,1.5,1.09,0.02,">1 nonsynonymous","I2H P7Y Y35D A42D T85I W106M",6
"lib1","SARS-CoV-2","GACCAAAGAAGGAGAA",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V S43P Y50L T55W N157R",5
"lib1","SARS-CoV-2","GACCAAAGATGCCCCG",5,90.2,10.26,-0.51,0.03,2.81,1.05,0,">1 nonsynonymous","T15N S147F",2
"lib1","SARS-CoV-2","GACCAAAGTATCAGCA",5,19.13,10.03,-0.73,0.16,2.14,1.15,0.02,">1 nonsynonymous","S69W D90A D98N S200F",4
"lib1","SARS-CoV-2","GACCAAATGGGCGAAA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","F12* Y91N",2
"lib1","SARS-CoV-2","GACCAACAAAGTAAAA",4,28.71,8.91,-1.85,0.1,2.67,1.06,0,">1 nonsynonymous","Y119A S139N V153G",3
"lib1","SARS-CoV-2","GACCAACAGTTTGAGG",4,34.75,7.17,-3.59,0.31,1.5,1.11,0.03,">1 nonsynonymous","P54M T100V N107Y",3
"lib1","SARS-CoV-2","GACCAACATAACAGCA",3,6.38,10.1,-0.66,0.09,2.07,1,0,">1 nonsynonymous","K56T W106S",2
"lib1","SARS-CoV-2","GACCAACCACCTTTTT",7,74.75,8.83,-1.94,0.09,2.46,1.1,0,">1 nonsynonymous","C6R G174L",2
"lib1","SARS-CoV-2","GACCAACCAGAACATA",2,31.06,9.6,-1.16,0.13,2.28,1.04,0.01,">1 nonsynonymous","F12M T85S N107A",3
"lib1","SARS-CoV-2","GACCAACCCGACCAAG",8,19.25,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","C61L T85C I142S G146E L162F",5
"lib1","SARS-CoV-2","GACCAACCCTAACCTA",3,30.77,10.75,-0.02,0.19,2.66,1.02,0.01,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","GACCAACCTATGGAAC",6,61.58,6.28,-4.48,0.7,1.5,1.17,0.02,">1 nonsynonymous","K48A R73G G152F",3
"lib1","SARS-CoV-2","GACCAACGTATACAGA",2,32.62,8.43,-2.34,0.15,2.77,1.03,0.01,"1 nonsynonymous","N171D",1
"lib1","SARS-CoV-2","GACCAACTACACTTTT",8,85.62,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10G A105C Y165T",3
"lib1","SARS-CoV-2","GACCAACTATATGTTA",8,110.36,10.02,-0.75,0.09,2.07,1.11,0,">1 nonsynonymous","K56L E135W V153H",3
"lib1","SARS-CoV-2","GACCAACTCAGCAACT",5,26.91,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","L5S V103S E186A",3
"lib1","SARS-CoV-2","GACCAACTCCCCTGCT",4,0.15,NA,NA,NA,NA,NA,NA,"stop","S43* K87V Q144E T148F",4
"lib1","SARS-CoV-2","GACCAACTTAATTATA",1,10.58,9.9,-0.86,0.15,2.29,1,0.01,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","GACCAAGAACACGTCC",1,23.54,9.09,-1.68,0.08,2.83,1.06,0,"1 nonsynonymous","Y143T",1
"lib1","SARS-CoV-2","GACCAAGACAAATAAG",12,145.3,10.77,0.01,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCAAGACCCCCAAT",3,2.21,NA,NA,NA,NA,NA,NA,"stop","A42H N64* G196L",3
"lib1","SARS-CoV-2","GACCAAGACCTCTCCA",5,77.88,10.78,0.02,0.08,2.94,1.04,0,">1 nonsynonymous","S29E T55Q",2
"lib1","SARS-CoV-2","GACCAAGCATTAGTAC",1,19.01,7.63,-3.14,0.25,1.5,1.11,0.02,">1 nonsynonymous","C61V R127L",2
"lib1","SARS-CoV-2","GACCAAGTTTCTACTC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41V T46S L95R W106* N157Y",5
"lib1","SARS-CoV-2","GACCAATAAGGCACTG",1,39.78,8.75,-2.02,0.17,2.31,1.09,0.01,">1 nonsynonymous","G9S N107L",2
"lib1","SARS-CoV-2","GACCAATAATTCCAAG",7,108.4,10.7,-0.06,0.05,2.89,1.05,0,">1 nonsynonymous","P7H Y178H",2
"lib1","SARS-CoV-2","GACCAATAGCCTCACA",9,0.9,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","GACCAATCAAATTCCT",2,1.73,NA,NA,NA,NA,NA,NA,"stop","T3R I88* W106M K128Q Y143L T201S",6
"lib1","SARS-CoV-2","GACCAATGGACTATAC",6,97.59,8.27,-2.49,0.13,2.72,1.06,0.01,"1 nonsynonymous","Y175A",1
"lib1","SARS-CoV-2","GACCAATTAAAAGCTG",2,2.87,NA,NA,NA,NA,NA,NA,"stop","Y39* T201S",2
"lib1","SARS-CoV-2","GACCAATTACAAAAAG",3,20.11,9.01,-1.76,0.25,1.63,1.1,0.03,">1 nonsynonymous","C31V L38S",2
"lib1","SARS-CoV-2","GACCACAACTAGTTAA",7,1.83,NA,NA,NA,NA,NA,NA,"stop","T3R F12A C61* D98E T148M S184I",6
"lib1","SARS-CoV-2","GACCACAAGCGGTTAA",1,19.27,10.04,-0.73,0.12,2.91,1.05,0.01,">1 nonsynonymous","C6S S113A",2
"lib1","SARS-CoV-2","GACCACACAAACCGAT",2,29.08,10.8,0.03,0.07,2.96,1.02,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","GACCACACAATTCCTA",1,11.32,10.23,-0.53,0.2,2.63,1.03,0.01,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","GACCACAGAGTAGACA",5,45.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16W V52N Q79M C102F R127P",5
"lib1","SARS-CoV-2","GACCACAGTCGCCTAA",5,1.71,NA,NA,NA,NA,NA,NA,"stop","V71I K128*",2
"lib1","SARS-CoV-2","GACCACAGTGAAAAAG",4,22.83,6,-4.76,2,1.5,1.27,0.04,"1 nonsynonymous","F70W",1
"lib1","SARS-CoV-2","GACCACATCTAAAAAC",6,22.99,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","GACCACATTACCATTC",3,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N P96A N107A G152L T170N",5
"lib1","SARS-CoV-2","GACCACCAAAAAAGCG",6,1.33,NA,NA,NA,NA,NA,NA,"stop","P82C Y121* P161W",3
"lib1","SARS-CoV-2","GACCACCACTTGATAA",1,1.47,NA,NA,NA,NA,NA,NA,"stop","S29R S45*",2
"lib1","SARS-CoV-2","GACCACCCAGAATAAA",6,22.53,7.01,-3.75,0.52,1.5,1.17,0.08,">1 nonsynonymous","T15N A81F G101Y",3
"lib1","SARS-CoV-2","GACCACCCAGGTTCCA",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L I72S G146S",3
"lib1","SARS-CoV-2","GACCACCGTAAGATTG",4,1.05,NA,NA,NA,NA,NA,NA,"stop","V37H W106* D112K G146Y",4
"lib1","SARS-CoV-2","GACCACCTCCTAAAAA",4,0.15,NA,NA,NA,NA,NA,NA,"stop","N64I A145S P161C Y165*",4
"lib1","SARS-CoV-2","GACCACCTGTACAACT",4,35.74,6.5,-4.26,0.3,1.5,1.09,0.01,">1 nonsynonymous","A14R Y159A Y165T",3
"lib1","SARS-CoV-2","GACCACCTTACCATGT",9,23.48,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","V11F K56L A81C V103T",4
"lib1","SARS-CoV-2","GACCACGAATTCCAGT",3,52.69,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A14L I88T G116V",3
"lib1","SARS-CoV-2","GACCACGAGAATTTAT",4,58.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41Q Y93T L131S",3
"lib1","SARS-CoV-2","GACCACGATAATCAAC",1,28.23,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F17L N64I Y91K Q144S",4
"lib1","SARS-CoV-2","GACCACGGCCGTAGCA",2,50.67,6.14,-4.63,0.58,1.5,1.18,0.01,">1 nonsynonymous","N40S R127I",2
"lib1","SARS-CoV-2","GACCACTCATCTACAT",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R G117Y",2
"lib1","SARS-CoV-2","GACCACTCTACCTATG",7,1.59,NA,NA,NA,NA,NA,NA,"stop","D59N I88A G101D V173S L188*",5
"lib1","SARS-CoV-2","GACCACTGATGCACAT",3,35.27,10,-0.77,0.12,2.14,1.01,0.01,">1 nonsynonymous","D34V F44V",2
"lib1","SARS-CoV-2","GACCACTGTCCTAGAA",1,105.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N30L N107D S113L N118I N151S",5
"lib1","SARS-CoV-2","GACCACTTAGACAGTA",5,130.42,10.29,-0.47,0.03,2.88,1.04,0,">1 nonsynonymous","N120R G174W",2
"lib1","SARS-CoV-2","GACCAGAAGCGATCAC",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V K128L G155L Q168V",4
"lib1","SARS-CoV-2","GACCAGAATCGACGCT",2,0.76,NA,NA,NA,NA,NA,NA,"stop","K87E N110S Y175*",3
"lib1","SARS-CoV-2","GACCAGACTATTCTTA",5,110.54,10.57,-0.19,0.03,2.85,1.08,0,"1 nonsynonymous","G152Y",1
"lib1","SARS-CoV-2","GACCAGAGGGTCTCAT",1,26.55,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","G86R F99I E141V Y165I",4
"lib1","SARS-CoV-2","GACCAGATCCCTACTA",16,192.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R16L V65G R73E T85M D97N",5
"lib1","SARS-CoV-2","GACCAGATGAGTTGAT",8,93.09,10.81,0.05,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCAGCAACAACTAT",4,41.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R C158R N171S",3
"lib1","SARS-CoV-2","GACCAGCAATCCACGG",7,47.51,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12Y L57R D137T",3
"lib1","SARS-CoV-2","GACCAGCCAACCAGTT",3,82.27,9.18,-1.58,0.09,2.28,1.15,0,">1 nonsynonymous","I2P Q176R",2
"lib1","SARS-CoV-2","GACCAGCTACTGTTAA",1,51.03,8.9,-1.87,0.11,2.83,1.12,0.01,">1 nonsynonymous","L5E L60E G117K K199N",4
"lib1","SARS-CoV-2","GACCAGGACATTCTAC",6,50.73,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G83D A89S S164G T170S R179A",5
"lib1","SARS-CoV-2","GACCAGGAGTAAAACT",2,20.36,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","L131S S139V T170M",3
"lib1","SARS-CoV-2","GACCAGGAGTACACAA",6,44.98,9.1,-1.67,0.14,1.83,1.1,0.01,"1 nonsynonymous","Y50N",1
"lib1","SARS-CoV-2","GACCAGGTCAAACAAA",1,16.13,10.52,-0.25,0.09,2.82,1.18,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","GACCAGTACTAAATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","W23L Y39I L60* T85D",4
"lib1","SARS-CoV-2","GACCAGTCAAAAACTG",1,46.11,6.2,-4.56,0.96,1.5,1.27,0.03,">1 nonsynonymous","V20R Y39P A105R",3
"lib1","SARS-CoV-2","GACCAGTCTGTATGGT",6,17.63,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","P82M C102N",2
"lib1","SARS-CoV-2","GACCAGTGACATCCCG",2,47.31,10.65,-0.11,0.09,2.82,1.04,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","GACCAGTTAAATGGAA",2,1.57,NA,NA,NA,NA,NA,NA,"stop","E10S L60S V65L C158*",4
"lib1","SARS-CoV-2","GACCAGTTGCTAACGA",8,104.69,10.75,-0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCATAAAAACTCGG",1,17.04,10,-0.77,0.13,2.61,1.13,0.01,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","GACCATAACGTAAAAA",1,30.3,10.69,-0.07,0.09,2.76,1.25,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCATAATATTACAT",5,47.78,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N30K V103D V173K",3
"lib1","SARS-CoV-2","GACCATAATTCTGACT",9,7.87,10.57,-0.2,0.24,2.52,1,0.02,">1 nonsynonymous","L60R D90L G101S P149M P177K L183T",6
"lib1","SARS-CoV-2","GACCATAGAGCAGACA",8,3.1,NA,NA,NA,NA,NA,NA,"stop","L60* G117M L122M",3
"lib1","SARS-CoV-2","GACCATAGGATAGTTA",7,53.78,10.17,-0.6,0.1,2.32,1.03,0,"1 nonsynonymous","Y50I",1
"lib1","SARS-CoV-2","GACCATATAAATAAAC",1,9.6,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","Y21R Y66S D90L D98H T201N",5
"lib1","SARS-CoV-2","GACCATATATTCTGTA",10,175.55,10.06,-0.7,0.08,2.31,1.07,0,">1 nonsynonymous","L5F A14G T55P",3
"lib1","SARS-CoV-2","GACCATATGCGCGGAC",11,217.21,9.65,-1.12,0.04,2.91,1.05,0,">1 nonsynonymous","K56S Y119N",2
"lib1","SARS-CoV-2","GACCATATTAGTCGAA",5,73.29,8.53,-2.24,0.18,1.5,1.09,0.01,">1 nonsynonymous","D68E N130L",2
"lib1","SARS-CoV-2","GACCATCACAGAACGT",3,47.9,6.12,-4.64,0.45,1.5,1.1,0.01,">1 nonsynonymous","L60D D90V V103M S108L P161D R179Y",6
"lib1","SARS-CoV-2","GACCATCACCCGGCGC",1,24.47,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G9L I88Q L122S T148A V181F",5
"lib1","SARS-CoV-2","GACCATCATGGTACCT",1,2.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143N",1
"lib1","SARS-CoV-2","GACCATCATTGATCAT",1,71.37,9.02,-1.74,0.09,2.7,1.08,0,">1 nonsynonymous","K48S A145F P197D",3
"lib1","SARS-CoV-2","GACCATCGCCGCCAAG",1,8.02,10.63,-0.13,0.14,2.64,1.29,0.01,">1 nonsynonymous","A42D K48H D59E P197R",4
"lib1","SARS-CoV-2","GACCATCTACGTTGCG",3,6.15,10.79,0.02,0.06,2.93,1.04,0,"1 nonsynonymous","Y91F",1
"lib1","SARS-CoV-2","GACCATCTCTATTTAA",2,36.02,6.54,-4.23,0.7,1.5,1.31,0.04,">1 nonsynonymous","N157I G196S",2
"lib1","SARS-CoV-2","GACCATCTTAAGCTTT",3,20.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S I104D E154I",3
"lib1","SARS-CoV-2","GACCATGAGACCATTA",2,44.81,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K56H P177R",2
"lib1","SARS-CoV-2","GACCATGAGCAATCTA",2,85.42,8.02,-2.75,0.27,1.5,1.13,0.02,">1 nonsynonymous","F134A Q176L",2
"lib1","SARS-CoV-2","GACCATGGACTGATGA",2,58.35,9.98,-0.78,0.1,2.61,1.02,0,"1 nonsynonymous","Y121W",1
"lib1","SARS-CoV-2","GACCATGGTATTAATT",2,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","GACCATTAGGGCACTA",7,80.01,10.7,-0.07,0.06,2.88,1.03,0,">1 nonsynonymous","S41G T201G",2
"lib1","SARS-CoV-2","GACCATTCCTACAGCA",5,49.38,10.03,-0.73,0.07,2.64,1,0,">1 nonsynonymous","A42S D90G",2
"lib1","SARS-CoV-2","GACCATTCTCTACGCA",1,27.93,9,-1.76,0.34,1.52,1.18,0.06,">1 nonsynonymous","N64W Y178E",2
"lib1","SARS-CoV-2","GACCCAAAAATCTATC",6,104.02,6.11,-4.66,0.62,1.5,1.16,0.01,">1 nonsynonymous","G146A R179L L188S",3
"lib1","SARS-CoV-2","GACCCAAAAATGAGCC",10,54.67,6.02,-4.74,1.25,1.5,1.17,0.03,">1 nonsynonymous","D34L P96F P133L F167C G174P",5
"lib1","SARS-CoV-2","GACCCAAAAGGCTGAC",12,40.04,6,-4.76,1.14,1.5,1.14,0,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","GACCCAAACCATACGA",1,46.56,10.74,-0.02,0.07,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCAAAGAGGACTG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","GACCCAAATAAACCCA",4,25.39,10.36,-0.41,0.12,2.4,1,0.01,">1 nonsynonymous","I104S V173R",2
"lib1","SARS-CoV-2","GACCCAAATGTATAAT",5,27.17,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","L95T S108P N171T",3
"lib1","SARS-CoV-2","GACCCAAATTCAACCA",2,51.61,9.34,-1.42,0.09,2.4,1.11,0,">1 nonsynonymous","V37K T85L K87C T140G",4
"lib1","SARS-CoV-2","GACCCAACAGTTCATG",1,0.18,NA,NA,NA,NA,NA,NA,"stop","T55L C158*",2
"lib1","SARS-CoV-2","GACCCAACATATAGAA",1,10.67,10.41,-0.35,0.09,2.93,1.05,0.01,">1 nonsynonymous","G9V T100H",2
"lib1","SARS-CoV-2","GACCCAACCGCAGTAA",2,24.9,7.45,-3.31,0.5,1.5,1.15,0.06,">1 nonsynonymous","N107V N151L Y159W",3
"lib1","SARS-CoV-2","GACCCAACGAAGCAAG",1,57.61,7.49,-3.27,0.11,1.58,1.07,0,"1 nonsynonymous","C150W",1
"lib1","SARS-CoV-2","GACCCAATGTGACCGT",3,16.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9I F62K D98Q V115C D137G Y175E",6
"lib1","SARS-CoV-2","GACCCACACAGGACAA",3,27.08,9.7,-1.07,0.14,2.22,1.1,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","GACCCACAGAATAATT",3,32.58,8.66,-2.11,0.25,1.5,1.08,0.05,">1 nonsynonymous","P82G T100L Q163K",3
"lib1","SARS-CoV-2","GACCCACAGGATCAAT",2,33.71,6.47,-4.3,0.58,1.5,1.15,0.04,">1 nonsynonymous","E76S E154L N171G",3
"lib1","SARS-CoV-2","GACCCACATGACGCAA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","S45Q D98* E141R G155V Q168S",5
"lib1","SARS-CoV-2","GACCCACCACGACAGT",7,50.9,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A14K I88F N107Q",3
"lib1","SARS-CoV-2","GACCCACCCGCGGAAT",7,50.45,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","E76F K87T P133R",3
"lib1","SARS-CoV-2","GACCCACCTACTTCTT",2,8.29,9.52,-1.24,0.27,1.58,1.21,0.04,">1 nonsynonymous","I2N G9I S19A I138R",4
"lib1","SARS-CoV-2","GACCCACCTAGTATGA",7,47.07,6.22,-4.54,0.83,1.5,1.26,0.03,">1 nonsynonymous","F47N I104R V173M",3
"lib1","SARS-CoV-2","GACCCACGAAAAGGCA",6,71.71,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T55N N64H P82T W106L G155A",5
"lib1","SARS-CoV-2","GACCCAGACTGATATC",4,81.21,10.53,-0.23,0.04,2.91,1.05,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","GACCCAGTACAAGCGT",4,67.16,9.79,-0.98,0.11,2.72,1.02,0.01,">1 nonsynonymous","C6A N64R",2
"lib1","SARS-CoV-2","GACCCAGTACCGCCAT",3,37.78,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","N92S Y159V",2
"lib1","SARS-CoV-2","GACCCAGTACCTCCTG",1,100.69,9.82,-0.94,0.09,2.09,1.06,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","GACCCATAATGACAAT",3,62.36,6.38,-4.38,0.49,1.5,1.12,0.02,">1 nonsynonymous","E10F C102F",2
"lib1","SARS-CoV-2","GACCCATAGGCTGCAG",7,60.84,10.78,0.01,0.05,2.95,1.03,0,">1 nonsynonymous","L187I K198L",2
"lib1","SARS-CoV-2","GACCCATAGGTCACTT",1,46.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V S41Q K56S R73V Y119E L125M",6
"lib1","SARS-CoV-2","GACCCATATGTCTCGG",1,16.9,6.55,-4.21,0.95,3,1.25,0.02,">1 nonsynonymous","V20A A42L Q84A K94G K132G",5
"lib1","SARS-CoV-2","GACCCATATTAGCAAA",2,37.81,10,-0.77,0.07,2.84,1.04,0,">1 nonsynonymous","N40A R78I K87S",3
"lib1","SARS-CoV-2","GACCCATCAACAATAG",4,1.29,NA,NA,NA,NA,NA,NA,"stop","I80* V103M L125M",3
"lib1","SARS-CoV-2","GACCCATGAGTGCCAC",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L V115E",2
"lib1","SARS-CoV-2","GACCCATTTGGACGCG",7,812.42,9.12,-1.65,0.15,1.5,1.12,0.01,">1 nonsynonymous","V11I K94P",2
"lib1","SARS-CoV-2","GACCCCAAACTAAATA",3,71,9.12,-1.65,0.05,2.85,1.06,0,">1 nonsynonymous","I2E N118K G166A",3
"lib1","SARS-CoV-2","GACCCCAACAGACTCA",6,14.44,7.63,-3.14,0.5,1.5,1.34,0.04,">1 nonsynonymous","I2N N13P S129W I142M",4
"lib1","SARS-CoV-2","GACCCCACAATGGGGA",8,42.71,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I88T Y143L",2
"lib1","SARS-CoV-2","GACCCCACCTGATAAA",15,121.78,8.53,-2.24,0.09,1.81,1.1,0,">1 nonsynonymous","C6M E135M Y175F",3
"lib1","SARS-CoV-2","GACCCCAGTGAGAAAG",2,22.53,10.24,-0.52,0.08,2.7,1,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","GACCCCATAATGGACA",3,84.64,10.02,-0.75,0.08,2.33,1.02,0,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","GACCCCATCTTAATGT",7,68.56,10.23,-0.53,0.07,2.53,1.01,0,">1 nonsynonymous","D90T D97S",2
"lib1","SARS-CoV-2","GACCCCATGATATCAC",5,65.23,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6G F12I F44Q L95G G172I",5
"lib1","SARS-CoV-2","GACCCCATTACATAAA",4,33.88,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Y91K D112G",2
"lib1","SARS-CoV-2","GACCCCATTGACCAAT",10,1.43,NA,NA,NA,NA,NA,NA,"stop","K56P Q84* N92E G101N L162A",5
"lib1","SARS-CoV-2","GACCCCCATGCCCATA",1,9.55,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C6R S19N Y35R N92V W106V I138R K198I",7
"lib1","SARS-CoV-2","GACCCCCATTCGCTCA",7,149.61,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L111P N118T V173S",3
"lib1","SARS-CoV-2","GACCCCCTAAAGAGAC",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88M W106V S164Y T170R T201V",5
"lib1","SARS-CoV-2","GACCCCGAAACCGGCT",8,148.7,6,-4.76,0.96,1.5,1.11,0,">1 nonsynonymous","S113N R136W",2
"lib1","SARS-CoV-2","GACCCCGAACAAATTC",5,89.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R124D P149E",2
"lib1","SARS-CoV-2","GACCCCGAATATTAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","A105R C158* V173P E186N",4
"lib1","SARS-CoV-2","GACCCCGAATGAGGAC",1,12.7,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","D97S D112V V182F",3
"lib1","SARS-CoV-2","GACCCCGACTATTCAG",1,21.31,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D90Y G146L",2
"lib1","SARS-CoV-2","GACCCCGAGCCCGCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61R Q84V F99* Y119G R127I T201S",6
"lib1","SARS-CoV-2","GACCCCGCACCACGTA",2,3.14,NA,NA,NA,NA,NA,NA,"stop","D59Y F99* G116V",3
"lib1","SARS-CoV-2","GACCCCGGCCACTGAA",9,2.25,NA,NA,NA,NA,NA,NA,"stop","T3L G101D K128* V173A",4
"lib1","SARS-CoV-2","GACCCCGGGACAAATT",5,1.8,NA,NA,NA,NA,NA,NA,"stop","K26* S69W S139T T148P Y165V",5
"lib1","SARS-CoV-2","GACCCCTACTACAACT",2,37.69,10.55,-0.21,0.07,2.9,1.05,0,">1 nonsynonymous","Y123S G146S",2
"lib1","SARS-CoV-2","GACCCCTCGAAACCTT",3,30.04,6,-4.76,2,3,1.24,0.03,">1 nonsynonymous","F99I C102R",2
"lib1","SARS-CoV-2","GACCCCTGGTCGTCAT",2,122.7,10.8,0.03,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCGAAAAAGCAGA",3,62.46,6,-4.76,0.64,2.63,1.19,0,">1 nonsynonymous","S41A K56N K87S T170I",4
"lib1","SARS-CoV-2","GACCCGAAACGGCGAG",1,17.58,7.28,-3.48,0.27,1.5,1.14,0.03,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","GACCCGAACGGAACCT",1,36.82,10.7,-0.06,0.05,2.98,1,0,">1 nonsynonymous","E141I P197Q",2
"lib1","SARS-CoV-2","GACCCGAATAGGGTAT",4,9.34,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15S A89W N107L",3
"lib1","SARS-CoV-2","GACCCGACACTCGAAA",10,150.71,9.92,-0.85,0.06,2.56,1.06,0,">1 nonsynonymous","A18F N64A N107P",3
"lib1","SARS-CoV-2","GACCCGAGGTCTGACC",2,82.15,10.85,0.09,0.1,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCGAGTCAGCTTG",19,5.57,NA,NA,NA,NA,NA,NA,"stop","K56M D90A G117* Q168G K199F",5
"lib1","SARS-CoV-2","GACCCGCCAGGGGAGA",2,26.97,10.02,-0.75,0.07,2.9,1.01,0,">1 nonsynonymous","P54N N120W",2
"lib1","SARS-CoV-2","GACCCGCGCAGTAACG",1,1.34,NA,NA,NA,NA,NA,NA,"stop","I2F P7V L60R L122* E154Q",5
"lib1","SARS-CoV-2","GACCCGCGGATCATTT",6,61.36,10.74,-0.03,0.08,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCGGAACCTTACT",1,5.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D F44E R78C I88P S113F Y119G",6
"lib1","SARS-CoV-2","GACCCGGCACCATCTA",6,61.95,10.24,-0.52,0.05,2.8,1.07,0,"1 nonsynonymous","N13Y",1
"lib1","SARS-CoV-2","GACCCGTAACAATGAT",4,45.31,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","G86K G152C",2
"lib1","SARS-CoV-2","GACCCGTAGTTGATGA",5,51.22,10.44,-0.32,0.04,2.92,1.04,0,">1 nonsynonymous","E154D S200Y",2
"lib1","SARS-CoV-2","GACCCGTCCATTTCTA",3,61.29,10.66,-0.1,0.08,2.84,1.05,0,"1 nonsynonymous","K48M",1
"lib1","SARS-CoV-2","GACCCGTCCCTTAAAC",5,0.23,NA,NA,NA,NA,NA,NA,"stop","I2C Y35* K48N W106I Y119D L131P",6
"lib1","SARS-CoV-2","GACCCGTTTATGACGA",1,12.99,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","V20R L95A I138V F156C",4
"lib1","SARS-CoV-2","GACCCTAATGATTATC",3,34.97,10.81,0.05,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCTACACAATCTG",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T S43F P82F S184G",4
"lib1","SARS-CoV-2","GACCCTACAGTCCAAT",1,8.1,10.5,-0.26,0.17,2.85,1.12,0.02,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","GACCCTACTTAAATAA",7,54.06,10.03,-0.74,0.06,2.79,1.02,0,">1 nonsynonymous","S29R N107C",2
"lib1","SARS-CoV-2","GACCCTACTTTAAATT",4,49.92,10.81,0.05,0.04,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCCTAGGCGATGTA",4,39.26,10.24,-0.53,0.09,2.89,1.03,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","GACCCTATAATAACCA",7,1.09,NA,NA,NA,NA,NA,NA,"stop","F99I E141* P169A G174A",4
"lib1","SARS-CoV-2","GACCCTCACTCCCCAA",2,23.39,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","P96M N109I F160K T170V",4
"lib1","SARS-CoV-2","GACCCTCCATTCATAG",6,62.75,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G51M K94T N151F Q163F T201V",5
"lib1","SARS-CoV-2","GACCCTCCTACGATGT",2,18.43,8.33,-2.43,0.41,1.5,1,0.06,">1 nonsynonymous","A42F C61R G101A N120S G146F G172V",6
"lib1","SARS-CoV-2","GACCCTCGCCTATGCC",3,1.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1L",1
"lib1","SARS-CoV-2","GACCCTCTACGCGAAT",6,71.04,6.33,-4.44,0.61,1.5,1.21,0.02,">1 nonsynonymous","I28K F99T G146K",3
"lib1","SARS-CoV-2","GACCCTCTGCAATACC",4,69.46,10.69,-0.08,0.05,2.92,1.02,0,">1 nonsynonymous","V37G K48L P54R",3
"lib1","SARS-CoV-2","GACCCTGCCGCTTGAA",3,148.76,8.87,-1.9,0.11,2.71,1.15,0,">1 nonsynonymous","T15S T63W F156D",3
"lib1","SARS-CoV-2","GACCCTGTAAATGACG",10,78.06,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68K K132E",2
"lib1","SARS-CoV-2","GACCCTTAAACTGAGA",4,60.9,10.45,-0.31,0.07,2.77,1.04,0,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","GACCCTTAGAACAAAA",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V L95G V103F L183K",4
"lib1","SARS-CoV-2","GACCCTTCGATATAAG",1,18.07,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","R127S R179T",2
"lib1","SARS-CoV-2","GACCCTTGAGTACACT",3,17.65,10.28,-0.49,0.11,2.69,1,0.01,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","GACCCTTGCCATTATC",7,128.88,10.63,-0.13,0.05,2.93,1.02,0,">1 nonsynonymous","F47V S200H",2
"lib1","SARS-CoV-2","GACCCTTGTCTCCGAT",5,99.08,6.26,-4.5,0.51,1.5,1.21,0.01,">1 nonsynonymous","E10T A42P R136S Y175S",4
"lib1","SARS-CoV-2","GACCCTTTCCTAAACG",2,30.12,9.01,-1.75,0.29,1.54,1.09,0.03,">1 nonsynonymous","G9C Y91M S129M",3
"lib1","SARS-CoV-2","GACCCTTTGTGTTGCA",11,93.42,8.54,-2.22,0.1,2.91,1.05,0,">1 nonsynonymous","I2Y F156V G166R",3
"lib1","SARS-CoV-2","GACCGAAAGATAAGGT",4,73.6,9.96,-0.8,0.07,2.24,1.03,0,">1 nonsynonymous","D90C P96S L122R P149K",4
"lib1","SARS-CoV-2","GACCGAAGTCATATTT",1,3.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180S",1
"lib1","SARS-CoV-2","GACCGAATAACTCGAT",4,5.14,NA,NA,NA,NA,NA,NA,"stop","S43Q A81* T85L K132T",4
"lib1","SARS-CoV-2","GACCGAATATATAGCA",1,51.57,6.28,-4.49,0.53,1.5,1.19,0.01,">1 nonsynonymous","D68A T170S",2
"lib1","SARS-CoV-2","GACCGAATATCCTGAG",1,33.24,9.2,-1.57,0.09,2.61,1.1,0,">1 nonsynonymous","N1S R73G",2
"lib1","SARS-CoV-2","GACCGAATCAAGTTCA",1,14.84,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N4K N13T F126S F160I",4
"lib1","SARS-CoV-2","GACCGAATGAACCCGT",1,0.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62G",1
"lib1","SARS-CoV-2","GACCGAATGACGATAA",3,96.36,10.43,-0.33,0.05,2.91,1.03,0,"1 nonsynonymous","N118E",1
"lib1","SARS-CoV-2","GACCGAATTGCAACAT",8,46.81,10.8,0.04,0.07,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCGAATTTTATAGT",6,20.82,10.69,-0.08,0.06,2.83,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","GACCGACAACTCTTAA",6,3.62,NA,NA,NA,NA,NA,NA,"stop","T170G Q176* T201Y",3
"lib1","SARS-CoV-2","GACCGACACGACATAA",2,25.89,9.87,-0.89,0.19,2.03,1,0.01,">1 nonsynonymous","Q84T W106K",2
"lib1","SARS-CoV-2","GACCGACATTACCCAC",1,0.09,NA,NA,NA,NA,NA,NA,"stop","D90N L111M E135* N157I",4
"lib1","SARS-CoV-2","GACCGACCTCGTGCCT",9,111.92,10.72,-0.04,0.07,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCGAGACACTTTTA",2,18.14,7.66,-3.1,0.31,1.5,1.2,0.03,">1 nonsynonymous","L111Y S139V F156C",3
"lib1","SARS-CoV-2","GACCGAGATACGATCA",1,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40H S45Y D68E V77K K94W S164A",6
"lib1","SARS-CoV-2","GACCGAGCATGGAGAG",2,5.21,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","F8Y F47I Q84K Y91R V103S C158Q",6
"lib1","SARS-CoV-2","GACCGAGCTATAAACT",7,1.81,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib1","SARS-CoV-2","GACCGAGGGAGGGAAA",1,46.22,10.83,0.07,0.1,2.94,1.03,0,">1 nonsynonymous","N4S K56Q P197Q",3
"lib1","SARS-CoV-2","GACCGATAAAAAGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L T15I W106R",3
"lib1","SARS-CoV-2","GACCGATAAAGGGCAC",1,1.35,NA,NA,NA,NA,NA,NA,"stop","K94S P133H G152* T170S",4
"lib1","SARS-CoV-2","GACCGATATTAACTTA",2,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46A P133H",2
"lib1","SARS-CoV-2","GACCGATCGTTCTCAA",7,51.16,10.05,-0.71,0.07,2.38,1.02,0,"1 nonsynonymous","V181L",1
"lib1","SARS-CoV-2","GACCGATGGATAACTA",2,50.04,10.72,-0.05,0.04,2.98,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GACCGATGTAATTATA",5,35.57,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N92T L111G",2
"lib1","SARS-CoV-2","GACCGATGTGCAACAC",2,1.42,NA,NA,NA,NA,NA,NA,"stop","G9N A14* G51N",3
"lib1","SARS-CoV-2","GACCGATTAACCCCAC",3,28.12,10.65,-0.11,0.08,3,1.02,0,"1 nonsynonymous","A81Q",1
"lib1","SARS-CoV-2","GACCGCAAAAACTAGA",1,79.84,8.56,-2.21,0.26,2.09,1.32,0.02,">1 nonsynonymous","C61R Q176V",2
"lib1","SARS-CoV-2","GACCGCACAGAAACCA",1,30.01,8.37,-2.39,0.14,2.84,1.05,0.01,">1 nonsynonymous","R16Y Y175S",2
"lib1","SARS-CoV-2","GACCGCACTAATAAAT",4,56.62,9.9,-0.87,0.13,2.45,1.05,0.01,">1 nonsynonymous","F8A V37K",2
"lib1","SARS-CoV-2","GACCGCATAAAAAACA",2,32.73,9.79,-0.98,0.05,2.93,1,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","GACCGCATGATGGCAA",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P K56H S139T",3
"lib1","SARS-CoV-2","GACCGCATTCCAAAAT",1,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7D G117R",2
"lib1","SARS-CoV-2","GACCGCCAACAACTAT",8,40.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N D90R I142K",3
"lib1","SARS-CoV-2","GACCGCGGAGCTCGGC",1,0.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","GACCGCGGTCCTCGCA",2,51.02,10.85,0.08,0.09,2.84,1.04,0,"1 nonsynonymous","K199G",1
"lib1","SARS-CoV-2","GACCGCGGTGAATTAT",9,2.28,NA,NA,NA,NA,NA,NA,"stop","P7E V32* S53R K94* G146L Y165A",6
"lib1","SARS-CoV-2","GACCGCTAGTTTAAAA",5,108.89,10.12,-0.65,0.05,2.76,1.03,0,">1 nonsynonymous","K56M S139N A145T",3
"lib1","SARS-CoV-2","GACCGCTTACCAAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13Y S19T K56* C158H",4
"lib1","SARS-CoV-2","GACCGGAAGCACACGT",3,15.68,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6S S45E R124A",3
"lib1","SARS-CoV-2","GACCGGAGAGAATAAG",3,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L V37C K87C N107A",4
"lib1","SARS-CoV-2","GACCGGAGCCACCGCA",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75V L95T G117A L131M S164N S200V",6
"lib1","SARS-CoV-2","GACCGGAGCCGCCAAG",1,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S N130F",2
"lib1","SARS-CoV-2","GACCGGATATGTTAGT",8,274.01,8.71,-2.05,0.08,2.81,1.06,0,">1 nonsynonymous","L125W G174V C195S",3
"lib1","SARS-CoV-2","GACCGGATATTGATTA",7,167.09,10.15,-0.62,0.05,2.85,1.03,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","GACCGGATGGAATGGA",7,126.99,9.91,-0.86,0.05,2.78,1.06,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","GACCGGCCAATTGCAT",2,10.52,8.59,-2.18,0.32,2.12,1.27,0.03,">1 nonsynonymous","Y175K T201R",2
"lib1","SARS-CoV-2","GACCGGCGATACACAA",3,83.03,10.72,-0.05,0.07,2.86,1.07,0,"1 nonsynonymous","K94H",1
"lib1","SARS-CoV-2","GACCGGTGATACAAGT",2,33.26,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K87C N120V C150V P161S T170R",5
"lib1","SARS-CoV-2","GACCGGTGCGCCATCC",1,26.24,8.43,-2.33,0.34,1.5,1.06,0.05,">1 nonsynonymous","C61M T85L D98V L125D",4
"lib1","SARS-CoV-2","GACCGTAACCAAAATG",2,1.26,NA,NA,NA,NA,NA,NA,"stop","N4G S29* K87P L131N F160A A190W",6
"lib1","SARS-CoV-2","GACCGTACAGTATTGC",7,36.75,7.63,-3.14,0.31,1.5,1,0.03,">1 nonsynonymous","S19R T85N N118S",3
"lib1","SARS-CoV-2","GACCGTACATGGGCTG",4,43.59,9.2,-1.56,0.12,2.46,1.08,0.01,">1 nonsynonymous","Y91W G155M",2
"lib1","SARS-CoV-2","GACCGTACCGCCTTAA",6,136.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9R C49H K94S N107Y T140S Q176S",6
"lib1","SARS-CoV-2","GACCGTACGACTAAAC",1,25.82,10.28,-0.49,0.11,2.76,1.13,0.01,">1 nonsynonymous","G9Q T15G S45T",3
"lib1","SARS-CoV-2","GACCGTAGGAACCTAC",4,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P L95Y Y123K",3
"lib1","SARS-CoV-2","GACCGTATACTCGCTG",6,45.78,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28L K56C P82N D98I G117K Q144L",6
"lib1","SARS-CoV-2","GACCGTATCATGTTCT",16,27.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99Y F126S N171P K198S",4
"lib1","SARS-CoV-2","GACCGTATCGTAAGAT",7,61.22,9.1,-1.67,0.1,2.9,1.08,0,">1 nonsynonymous","L5P T170V K198N",3
"lib1","SARS-CoV-2","GACCGTATTGAATTCC",2,0.8,NA,NA,NA,NA,NA,NA,"stop","T55I A89* D97* F134N",4
"lib1","SARS-CoV-2","GACCGTGAATATCAGT",4,40.63,8.44,-2.32,0.15,2.52,1.05,0.01,">1 nonsynonymous","Y143N E154K",2
"lib1","SARS-CoV-2","GACCGTGACATTGACA",9,23.05,6,-4.76,2,3,1.24,0,">1 nonsynonymous","I80M G101S",2
"lib1","SARS-CoV-2","GACCGTGCAAAGCCGC",8,40.07,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F12L F99C D112L",3
"lib1","SARS-CoV-2","GACCTAAAAATTTGAT",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105F S113Y",2
"lib1","SARS-CoV-2","GACCTAAATAATGAAG",2,33.47,9.59,-1.18,0.25,1.77,1.11,0.02,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","GACCTAACCGAGTCAA",5,8.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53F F99S G172Y",3
"lib1","SARS-CoV-2","GACCTAACCTGGACAT",4,20.01,6,-4.76,0.98,3,1.2,0.01,">1 nonsynonymous","L5I V20Q K94F N107M R179K C195F",6
"lib1","SARS-CoV-2","GACCTAACGCAATAGA",1,7.25,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","T63W I104K",2
"lib1","SARS-CoV-2","GACCTAAGAGCTTCAA",4,53.61,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","L60S F99S Y178I",3
"lib1","SARS-CoV-2","GACCTAATATGCAGAT",2,51.21,10.08,-0.69,0.13,2.34,1.03,0.01,">1 nonsynonymous","S45N E135R",2
"lib1","SARS-CoV-2","GACCTACAACACAGAC",6,53.31,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","T55N G86F T170L",3
"lib1","SARS-CoV-2","GACCTACAACGGTGAA",2,14.32,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T85S C158T Y175P",3
"lib1","SARS-CoV-2","GACCTACAGAAAACAC",3,75.96,10.71,-0.05,0.04,2.9,1.05,0,"1 nonsynonymous","P191S",1
"lib1","SARS-CoV-2","GACCTACATTTGCAGT",14,225.46,10.71,-0.05,0.04,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCTACCCTATGTCA",10,94.67,8.18,-2.58,0.25,1.5,1.03,0.02,">1 nonsynonymous","D98A D112L I142V",3
"lib1","SARS-CoV-2","GACCTACCGACTACAT",1,6.31,10.93,0.17,0.13,2.96,1.03,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","GACCTACGCCAATAGG",2,12.18,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V20L T55I L57R Q84K",4
"lib1","SARS-CoV-2","GACCTACGTACAAACA",4,64.23,10.86,0.09,0.09,2.91,1.02,0,"1 nonsynonymous","V32M",1
"lib1","SARS-CoV-2","GACCTACGTACAGTGA",4,48.93,10.63,-0.13,0.06,2.89,1.04,0,"1 nonsynonymous","E141P",1
"lib1","SARS-CoV-2","GACCTACGTCCAGATT",3,11.18,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","V11R C49Y",2
"lib1","SARS-CoV-2","GACCTACTCAGCCCAG",2,133.15,8.42,-2.34,0.14,2.94,1.03,0.01,">1 nonsynonymous","F126R F156V",2
"lib1","SARS-CoV-2","GACCTACTCGAAGCAA",10,60.43,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y21V V180K",2
"lib1","SARS-CoV-2","GACCTACTGGCCCTAA",3,1.9,NA,NA,NA,NA,NA,NA,"stop","K56M K128A V173*",3
"lib1","SARS-CoV-2","GACCTACTGTGGGCCA",9,116.9,10.01,-0.75,0.05,2.9,1.02,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","GACCTAGAAGGACGAG",5,35.39,10.75,-0.02,0.04,2.99,1,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","GACCTAGTATAGTCAA",5,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66F A105V",2
"lib1","SARS-CoV-2","GACCTAGTCTTTCGAC",2,7.73,8.48,-2.28,0.11,2.93,1.02,0.01,">1 nonsynonymous","S45T N171R",2
"lib1","SARS-CoV-2","GACCTATAAACTGGGC",5,30.4,6.06,-4.7,0.64,1.5,1.17,0.01,">1 nonsynonymous","L60D P82I T100L N107E",4
"lib1","SARS-CoV-2","GACCTATAACGGTTCC",5,23.06,9.74,-1.02,0.11,2.01,1.06,0.01,">1 nonsynonymous","S41M V103T",2
"lib1","SARS-CoV-2","GACCTATACGCTACGT",4,1.86,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","GACCTATAGCATCAGG",7,120.95,10.85,0.08,0.06,2.89,1.07,0,"1 nonsynonymous","R16N",1
"lib1","SARS-CoV-2","GACCTATGGGCCGTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35C P82D C150*",3
"lib1","SARS-CoV-2","GACCTATGGGTGATAC",4,22.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41R L60Q F99R N151A",4
"lib1","SARS-CoV-2","GACCTATGTCTAAAGA",1,22.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V Y123N C150E K198R",4
"lib1","SARS-CoV-2","GACCTATGTGAGAGGT",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I C102R S129T",3
"lib1","SARS-CoV-2","GACCTATTACTCCATG",6,100.99,10.17,-0.6,0.07,2.48,1,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","GACCTCAACATCGTAG",1,6.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9C S19K L131S",3
"lib1","SARS-CoV-2","GACCTCACAAAGAGTA",9,101.51,10.72,-0.04,0.05,2.88,1.1,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","GACCTCACCTGGGTGC",2,14.98,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","A81S N107T K114V P149F N157A",5
"lib1","SARS-CoV-2","GACCTCACGAAACAAT",2,14.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11Y V20L L60Y L95A V103I N171C",6
"lib1","SARS-CoV-2","GACCTCAGCCAGCCTA",1,14.93,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35Q K48L V103S D112K",4
"lib1","SARS-CoV-2","GACCTCAGGACAAAGG",10,53.75,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T3N R136G I142E V173S",4
"lib1","SARS-CoV-2","GACCTCATCAGGTAGG",4,74.94,6.83,-3.93,0.3,1.5,1.14,0.02,">1 nonsynonymous","C49F T170V",2
"lib1","SARS-CoV-2","GACCTCATTTCTCCCA",3,253.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34A R73K R179E",3
"lib1","SARS-CoV-2","GACCTCCAAAATCCCA",3,0.32,NA,NA,NA,NA,NA,NA,"stop","V71* D112H L122P",3
"lib1","SARS-CoV-2","GACCTCCATAGTCGTA",1,9.57,9.8,-0.96,0.23,1.93,1.12,0.02,">1 nonsynonymous","S36K L95C",2
"lib1","SARS-CoV-2","GACCTCCGACTAGGAT",8,209.8,10.76,0,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACCTCGAAATACTGA",3,15.05,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","T100D V180Y",2
"lib1","SARS-CoV-2","GACCTCGCCATGAATG",1,49.45,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N107Y V173M L187H",3
"lib1","SARS-CoV-2","GACCTCGTACTCCCTA",3,53.14,10.53,-0.23,0.06,2.95,1.02,0,">1 nonsynonymous","R27V D90S H189L",3
"lib1","SARS-CoV-2","GACCTCGTCGCGGTGT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","Y91M T100F G117* L162F",4
"lib1","SARS-CoV-2","GACCTCTAAATATTAT",3,20.59,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F12H L57M D90H N107K T193S",5
"lib1","SARS-CoV-2","GACCTCTATCAACCAT",1,40.68,9.58,-1.19,0.18,1.79,1.11,0.01,"1 nonsynonymous","P82M",1
"lib1","SARS-CoV-2","GACCTCTCCCGCCTGA",4,3.95,NA,NA,NA,NA,NA,NA,"stop","Y35V K128*",2
"lib1","SARS-CoV-2","GACCTCTTTAAATTTA",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A G174W",2
"lib1","SARS-CoV-2","GACCTGACTACGGACG",1,28.99,10.74,-0.03,0.11,2.82,1.11,0,">1 nonsynonymous","N4R E154S",2
"lib1","SARS-CoV-2","GACCTGATCTGTTTTA",1,11.92,10.24,-0.53,0.09,2.98,1,0.01,">1 nonsynonymous","D59T D98V S129T",3
"lib1","SARS-CoV-2","GACCTGCAATTACGAG",1,37.78,10.09,-0.67,0.08,2.79,1.07,0,">1 nonsynonymous","S36L S164V V194I",3
"lib1","SARS-CoV-2","GACCTGCCAATAAACC",1,5.32,10.68,-0.09,0.1,3,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GACCTGCCACATACGT",2,36.84,6,-4.76,1.07,3,1.15,0,">1 nonsynonymous","W23L A105T E141F",3
"lib1","SARS-CoV-2","GACCTGCCCCCGTTGC",2,10,10.51,-0.25,0.14,2.93,1.1,0.01,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","GACCTGGAAACATCAT",8,60.39,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","Y35S D98Y V103A N151I",4
"lib1","SARS-CoV-2","GACCTGGTCGGTCTTT",10,66.76,9.42,-1.34,0.09,2.13,1.11,0,">1 nonsynonymous","E135W S164G",2
"lib1","SARS-CoV-2","GACCTGTAAAATTCTT",6,96.6,10.72,-0.04,0.06,2.89,1.07,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","GACCTGTATAACATAG",3,110.21,10.79,0.03,0.06,2.93,1.03,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","GACCTGTCGGCATAAA",5,49.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R16M Y39C R179F",3
"lib1","SARS-CoV-2","GACCTGTGATCTTTTT",7,31.44,7.08,-3.68,0.35,1.5,1.01,0.03,">1 nonsynonymous","G101D N107H Q144I",3
"lib1","SARS-CoV-2","GACCTGTGTACAAATC",6,109.97,6.44,-4.32,0.54,1.5,1.23,0.02,">1 nonsynonymous","C61S S108L T201N",3
"lib1","SARS-CoV-2","GACCTGTTTTAAATAG",1,27.9,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","A22W N30E D98V N107V",4
"lib1","SARS-CoV-2","GACCTTAAAGAGATAG",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10W A89V",3
"lib1","SARS-CoV-2","GACCTTAATATCATGG",3,40.87,10.72,-0.04,0.04,2.87,1.06,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","GACCTTAATGCATATA",4,56.71,10.48,-0.28,0.05,2.87,1.05,0,">1 nonsynonymous","S41M S53Y",2
"lib1","SARS-CoV-2","GACCTTACGACGAGTT",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I K87N P96Q",3
"lib1","SARS-CoV-2","GACCTTACGGTCCTAA",3,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V G116I G146R",3
"lib1","SARS-CoV-2","GACCTTACTAAGTTTT",3,18.95,6.61,-4.15,0.72,1.5,1.12,0.07,">1 nonsynonymous","T15F W23E L162E",3
"lib1","SARS-CoV-2","GACCTTACTTTCCAGC",4,2.92,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","GACCTTATCACGTAAA",4,5.97,7.42,-3.34,0.41,1.5,1.12,0.03,">1 nonsynonymous","A81V Y121T",2
"lib1","SARS-CoV-2","GACCTTCACAACAGAC",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y V180K",2
"lib1","SARS-CoV-2","GACCTTCATGGTGACC",9,165.94,6,-4.76,2,1.5,1.13,0,"1 nonsynonymous","P177F",1
"lib1","SARS-CoV-2","GACCTTCCAAGTCTTA",13,222.35,10.37,-0.39,0.04,2.94,1.02,0,"1 nonsynonymous","T170Q",1
"lib1","SARS-CoV-2","GACCTTCGAATATTTT",1,15.5,10.51,-0.26,0.13,2.71,1.02,0.01,"1 nonsynonymous","E135V",1
"lib1","SARS-CoV-2","GACCTTCTACTCTAAC",1,11.98,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","A18T N30G L162Y Y178N",4
"lib1","SARS-CoV-2","GACCTTCTGAGCCGAA",1,20.73,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","N40L F167V",2
"lib1","SARS-CoV-2","GACCTTGAAAGCCAAG",7,53.33,10.67,-0.09,0.07,2.88,1.02,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","GACCTTGCCCCACGGT",3,8.87,10.55,-0.22,0.08,2.97,1,0,">1 nonsynonymous","S41K L60V",2
"lib1","SARS-CoV-2","GACCTTGTAATACTCG",2,7.04,7.71,-3.05,0.24,1.5,1.08,0.02,">1 nonsynonymous","F8P F44K S139A Q168R",4
"lib1","SARS-CoV-2","GACCTTGTAATTTAAA",6,39.13,10.53,-0.24,0.06,2.81,1.05,0,">1 nonsynonymous","T15H S36T",2
"lib1","SARS-CoV-2","GACCTTGTGAAATACA",1,6.07,10.48,-0.29,0.14,2.98,1.03,0.01,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","GACCTTGTTATTCTCG",2,0.44,NA,NA,NA,NA,NA,NA,"stop","I88K L95*",2
"lib1","SARS-CoV-2","GACCTTGTTTATCTTG",4,37.78,10.75,-0.01,0.07,2.85,1.14,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","GACCTTTAAATATCAA",3,28.46,8.96,-1.8,0.23,2.64,1.22,0.02,">1 nonsynonymous","K56C A67L E154C",3
"lib1","SARS-CoV-2","GACCTTTAAGAGATCA",7,89.77,9.28,-1.49,0.14,1.79,1.12,0.01,">1 nonsynonymous","S139L P169I",2
"lib1","SARS-CoV-2","GACCTTTAATAACAGG",1,132.29,10.74,-0.03,0.06,2.89,1.05,0,">1 nonsynonymous","A14Q K128D",2
"lib1","SARS-CoV-2","GACCTTTACAATATTA",3,33.15,6,-4.76,1.01,1.5,1.12,0.01,">1 nonsynonymous","Y123D Q168L G174L",3
"lib1","SARS-CoV-2","GACCTTTAGAACCACC",10,85.39,10.54,-0.22,0.04,2.89,1.05,0,">1 nonsynonymous","G9R P149R",2
"lib1","SARS-CoV-2","GACCTTTAGCTAAACG",5,143.67,10.05,-0.72,0.05,2.85,1.06,0,">1 nonsynonymous","K114G V173Q",2
"lib1","SARS-CoV-2","GACCTTTATTACCCGT",7,115.19,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9T S29I G152R V180K",4
"lib1","SARS-CoV-2","GACCTTTCACATGGTC",8,0.33,NA,NA,NA,NA,NA,NA,"stop","A14V R25* C61M P149S",4
"lib1","SARS-CoV-2","GACCTTTGAGAGTTTG",1,10.68,9.93,-0.83,0.43,1.65,1.06,0.05,">1 nonsynonymous","F12N C61V",2
"lib1","SARS-CoV-2","GACCTTTTACCATCAA",5,33.03,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L5Y T55S A81S C150E F160L",5
"lib1","SARS-CoV-2","GACCTTTTGATGTTAC",8,40.88,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N1P K56N R127N C150V",4
"lib1","SARS-CoV-2","GACGAAAAAGACAGAT",1,33.69,9.48,-1.28,0.09,2.67,1.12,0.01,">1 nonsynonymous","L125P F134H T148R",3
"lib1","SARS-CoV-2","GACGAAAAAGCCTTGC",4,55.77,10.27,-0.49,0.1,2.74,1.03,0,">1 nonsynonymous","G51S N64K",2
"lib1","SARS-CoV-2","GACGAAAACATAATAC",2,5.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9R V52R F62R F70I K87S V103G Y119R E154C",8
"lib1","SARS-CoV-2","GACGAAAACCCTTCCA",8,181.57,6.34,-4.42,0.25,1.5,1.14,0,">1 nonsynonymous","N58K V115W Y175E",3
"lib1","SARS-CoV-2","GACGAAAATTATAACG",2,78.6,10.75,-0.02,0.08,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGAAACGACTATAC",1,6.82,10.05,-0.71,0.09,2.91,1.01,0,"1 nonsynonymous","F134I",1
"lib1","SARS-CoV-2","GACGAAACTAATTTTA",1,21.48,10.67,-0.1,0.13,2.81,1.03,0.01,">1 nonsynonymous","S41L G51K",2
"lib1","SARS-CoV-2","GACGAAACTACGACAA",9,116.93,9.97,-0.8,0.09,2.21,1,0,">1 nonsynonymous","D90G D97K",2
"lib1","SARS-CoV-2","GACGAAACTAGACTGT",1,13.48,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","V37C A42Y I88W S113V Q163T",5
"lib1","SARS-CoV-2","GACGAAAGCTTACGCA",2,21.17,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","G116R G155I T170L S184A",4
"lib1","SARS-CoV-2","GACGAAAGGCCCTCAT",5,140.64,10.53,-0.24,0.04,2.91,1.04,0,">1 nonsynonymous","D90C S200F",2
"lib1","SARS-CoV-2","GACGAAATGAATTACC",2,11.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61H I80Y D98V N107Y I142M R179V",6
"lib1","SARS-CoV-2","GACGAAATTCATAGAA",1,32.33,7.92,-2.85,0.33,1.5,1.15,0.03,">1 nonsynonymous","P7I N24P Q84R N171Y",4
"lib1","SARS-CoV-2","GACGAAATTGATCCAA",2,127.27,10.27,-0.5,0.04,2.99,1,0,">1 nonsynonymous","C61E G174D",2
"lib1","SARS-CoV-2","GACGAACAAGTAAATC",3,90.56,9.25,-1.52,0.08,2.86,1.12,0,">1 nonsynonymous","D97R G166T",2
"lib1","SARS-CoV-2","GACGAACACAGATGCC",2,16.89,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","N1L Y93T",2
"lib1","SARS-CoV-2","GACGAACAGCAATCAC",4,102.22,10.77,0,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGAACTAGGGTACG",4,93.91,8.45,-2.32,0.09,2.63,1.07,0,">1 nonsynonymous","S41Q Q84T N107Q Y119H",4
"lib1","SARS-CoV-2","GACGAACTCACGGACT",3,29.05,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N24W C61E Y165R",3
"lib1","SARS-CoV-2","GACGAACTGCGCCTGT",8,33.12,7.26,-3.51,0.41,1.5,1.37,0.05,">1 nonsynonymous","F8D S41L Y143L C150F G174V",5
"lib1","SARS-CoV-2","GACGAAGAATAAGAGA",1,22.19,9.73,-1.03,0.19,1.76,1.09,0.02,">1 nonsynonymous","G83V K94H L122V",3
"lib1","SARS-CoV-2","GACGAAGAATCTTCGC",1,33.88,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","C31G D98L T140D G172I",4
"lib1","SARS-CoV-2","GACGAAGGTACTATCA",3,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I S43T A89H T148A",4
"lib1","SARS-CoV-2","GACGAAGGTTAACCCT",9,12.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D59G V103H T201C",3
"lib1","SARS-CoV-2","GACGAAGTAATGCTTA",10,199.48,10.44,-0.32,0.04,2.89,1.04,0,">1 nonsynonymous","G83Y E141Y",2
"lib1","SARS-CoV-2","GACGAAGTGTACAGAA",16,79.9,8.59,-2.17,0.19,1.5,1.21,0.01,">1 nonsynonymous","A18V S41E L57T",3
"lib1","SARS-CoV-2","GACGAATATAAATGAC",3,19.15,10.46,-0.31,0.07,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGAATATTCACGAA",1,5.6,6.12,-4.65,2,1.5,1.24,0.03,">1 nonsynonymous","F8R S29N F47S A81F K94H E141F N157P G166H T201I",9
"lib1","SARS-CoV-2","GACGAATCCAGAAACC",11,91.57,10.85,0.08,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGAATCCTAAGTCA",5,156.44,10.42,-0.34,0.04,2.91,1.02,0,"1 nonsynonymous","Y91M",1
"lib1","SARS-CoV-2","GACGAATCCTTACGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y N58L G166V",3
"lib1","SARS-CoV-2","GACGAATGACCCTAAG",7,82.89,10.74,-0.03,0.04,2.89,1.05,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","GACGAATTAGCACTGT",2,52.26,10.7,-0.06,0.09,2.93,1.04,0,"1 nonsynonymous","P197F",1
"lib1","SARS-CoV-2","GACGACAAATAACTGT",4,16.12,10.78,0.02,0.1,2.79,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGACAATTCCATAT",5,40.44,6.61,-4.16,0.37,1.5,1.11,0.02,">1 nonsynonymous","C6Y S19F F44N E76W A145R",5
"lib1","SARS-CoV-2","GACGACACGATACAGC",5,9.38,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","P96I N118L I138S",3
"lib1","SARS-CoV-2","GACGACACTGAAACAA",4,112.03,10.61,-0.15,0.03,2.9,1.03,0,"1 nonsynonymous","G116W",1
"lib1","SARS-CoV-2","GACGACAGCCTAAAAT",1,17.87,7.99,-2.77,0.33,1.5,1.22,0.03,">1 nonsynonymous","W23S N120Q I142F",3
"lib1","SARS-CoV-2","GACGACATACTATACA",9,106.65,10.59,-0.18,0.06,2.95,1,0,">1 nonsynonymous","D90C T201M",2
"lib1","SARS-CoV-2","GACGACATCAAACAAA",6,86.59,8.72,-2.04,0.09,2.83,1.1,0,">1 nonsynonymous","Y123E E154V",2
"lib1","SARS-CoV-2","GACGACCAAAGGCTGC",11,106.6,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N1R F12V R25G D97N S113Y Y119V",6
"lib1","SARS-CoV-2","GACGACCCCCGTTACC",2,59.76,8.42,-2.34,0.32,1.5,1.11,0.04,">1 nonsynonymous","Y91H Q144F T201V",3
"lib1","SARS-CoV-2","GACGACCCCTATCATG",3,20.65,10.01,-0.75,0.14,2.1,1.06,0.01,">1 nonsynonymous","S19Y R27V",2
"lib1","SARS-CoV-2","GACGACGATCCGCATA",1,14.46,9.76,-1.01,0.33,1.5,1,0.08,">1 nonsynonymous","S41R P96L",2
"lib1","SARS-CoV-2","GACGACGTACAGGTAG",14,20.61,7.73,-3.03,0.36,1.5,1.09,0.04,">1 nonsynonymous","N1R L183T",2
"lib1","SARS-CoV-2","GACGACTAACGATTTT",7,31.14,7.5,-3.26,0.35,1.5,1.12,0.05,">1 nonsynonymous","F17K N64G T100R",3
"lib1","SARS-CoV-2","GACGACTACTGTTAAG",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q V77A P82L I104S L162Y",5
"lib1","SARS-CoV-2","GACGACTAGAACGAAA",8,94.51,10.24,-0.53,0.03,2.82,1.02,0,">1 nonsynonymous","T85V A105G I138T N151K",4
"lib1","SARS-CoV-2","GACGACTATTCGGGAG",4,67.15,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","GACGACTCAATTCGAG",3,77.83,9.12,-1.65,0.06,2.78,1.18,0,"1 nonsynonymous","G166H",1
"lib1","SARS-CoV-2","GACGACTCACAGTGAT",10,198.06,10.11,-0.65,0.05,2.73,1.03,0,">1 nonsynonymous","V52A F160L",2
"lib1","SARS-CoV-2","GACGACTCACATGACT",6,107.68,10.57,-0.19,0.04,2.92,1.05,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","GACGACTTAAACAGCA",1,1.13,NA,NA,NA,NA,NA,NA,"stop","T55* T201I",2
"lib1","SARS-CoV-2","GACGAGAAGTTGAACC",6,69.89,9.81,-0.96,0.1,2.16,1.05,0,">1 nonsynonymous","R124K N151K",2
"lib1","SARS-CoV-2","GACGAGAATGTAAACG",4,0,NA,NA,NA,NA,NA,NA,"stop","L38E K48L D97*",3
"lib1","SARS-CoV-2","GACGAGACAAGCTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","GACGAGACGTAGACCA",1,25.01,6.78,-3.99,0.43,1.5,1.22,0.03,">1 nonsynonymous","A22S S36L S45L Q84L",4
"lib1","SARS-CoV-2","GACGAGACTTTCATAT",1,11.79,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D68N D90S F99E P149F G155D Q163Y",6
"lib1","SARS-CoV-2","GACGAGAGGAGTTTTG",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y F134T N157G T170R",4
"lib1","SARS-CoV-2","GACGAGATAGACACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","I104F A192*",2
"lib1","SARS-CoV-2","GACGAGATGTAGCCAA",4,26.81,10.6,-0.16,0.08,2.84,1.08,0,">1 nonsynonymous","S19M L122K",2
"lib1","SARS-CoV-2","GACGAGCAAAGCTAAT",4,202.22,10.78,0.01,0.06,2.91,1.07,0,">1 nonsynonymous","I28Y T55N",2
"lib1","SARS-CoV-2","GACGAGCCACCAAAAT",1,77.58,10.01,-0.75,0.08,2.22,1.04,0,">1 nonsynonymous","N120S E141K V173M L183V",4
"lib1","SARS-CoV-2","GACGAGCCCAAAGTAA",6,0.19,NA,NA,NA,NA,NA,NA,"stop","L125* F156H",2
"lib1","SARS-CoV-2","GACGAGCCCGACGGCA",5,28.66,8.96,-1.81,0.12,1.94,1.13,0.01,">1 nonsynonymous","C6Y Y121F T148L N151E",4
"lib1","SARS-CoV-2","GACGAGCCCGATAATC",1,19.81,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12N N157V S184Y",3
"lib1","SARS-CoV-2","GACGAGGTTAAAAACA",3,101.83,9.46,-1.3,0.15,1.75,1.11,0.01,">1 nonsynonymous","E10K A18S Y35E G83Y",4
"lib1","SARS-CoV-2","GACGAGTATTAGTCCA",7,90.65,6,-4.76,1.01,1.5,1.14,0.01,">1 nonsynonymous","I2R K94T",2
"lib1","SARS-CoV-2","GACGAGTCAGCAGTCT",2,21.3,9.14,-1.62,0.19,1.73,1.12,0.02,">1 nonsynonymous","A42K C49M C61D",3
"lib1","SARS-CoV-2","GACGAGTGGAACCACC",11,49.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V I104S",2
"lib1","SARS-CoV-2","GACGAGTGGATTCCTA",5,75.5,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","D112R",1
"lib1","SARS-CoV-2","GACGATACAGCACGAA",3,46.78,10.9,0.13,0.07,2.9,1.02,0,"1 nonsynonymous","R27V",1
"lib1","SARS-CoV-2","GACGATAGGGAAAATA",3,138.64,10.66,-0.1,0.04,2.87,1.07,0,">1 nonsynonymous","S45T A192S",2
"lib1","SARS-CoV-2","GACGATAGTAGAATAC",1,28.99,10.65,-0.11,0.04,2.97,1.03,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","GACGATCAAAGAACCC",2,1.39,NA,NA,NA,NA,NA,NA,"stop","S41A D59C K87* Q144A H189Q K199V",6
"lib1","SARS-CoV-2","GACGATCAAATGTCCG",7,28.28,10.13,-0.64,0.17,1.87,1.19,0.02,">1 nonsynonymous","N13R V71L",2
"lib1","SARS-CoV-2","GACGATCATATCAATA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","P7* F62D K94D G146Y",4
"lib1","SARS-CoV-2","GACGATCTAAAACACT",3,60.17,10.75,-0.01,0.08,2.81,1.11,0,">1 nonsynonymous","K114S K198D",2
"lib1","SARS-CoV-2","GACGATCTTATTTTTG",7,39.96,7.52,-3.25,0.2,1.5,1.23,0.01,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","GACGATCTTGTAACCA",1,6.02,6,-4.76,2,1.5,1,0,">1 nonsynonymous","Y66Q L122F F167R",3
"lib1","SARS-CoV-2","GACGATGAGGATTTCT",2,9.15,10.1,-0.67,0.06,2.99,1,0,">1 nonsynonymous","I2S F99Y V115L",3
"lib1","SARS-CoV-2","GACGATGCGCACAACG",1,0.3,NA,NA,NA,NA,NA,NA,"stop","R25N Y123*",2
"lib1","SARS-CoV-2","GACGATGGCTCCGTGG",7,74.11,9.48,-1.28,0.16,1.82,1.18,0.01,">1 nonsynonymous","F8D T55S K128L",3
"lib1","SARS-CoV-2","GACGATTAAATAGCCC",12,74.07,8.68,-2.09,0.18,1.57,1.21,0.01,">1 nonsynonymous","A18R P96K",2
"lib1","SARS-CoV-2","GACGATTATGCGTTTA",8,77.97,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9S F17I V103L",3
"lib1","SARS-CoV-2","GACGATTCTCCAACCT",1,65.95,9.06,-1.7,0.07,2.86,1.1,0,">1 nonsynonymous","C61P G117V",2
"lib1","SARS-CoV-2","GACGATTGAGCCCGAA",2,19.92,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","N4L V52D Y93P",3
"lib1","SARS-CoV-2","GACGATTTCTGTAAAG",20,309.68,8.05,-2.72,0.16,1.78,1.14,0.01,">1 nonsynonymous","A14T Y143S",2
"lib1","SARS-CoV-2","GACGCAAAGTGTAAAG",5,5.65,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A22T W106G L111D N118Y R136H",5
"lib1","SARS-CoV-2","GACGCAACCAAAATCA",10,105.15,10.11,-0.65,0.08,2.43,1.04,0,">1 nonsynonymous","V71M V153I",2
"lib1","SARS-CoV-2","GACGCAACCAATTTTG",2,17.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N171M",1
"lib1","SARS-CoV-2","GACGCAACTGAACGTT",4,58.16,10.46,-0.3,0.04,2.92,1,0,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","GACGCAAGAAGAACAT",5,21.15,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F8S D98I V103M",3
"lib1","SARS-CoV-2","GACGCACACTTTGAGC",1,12.7,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","A105V E141I C150K",3
"lib1","SARS-CoV-2","GACGCACAGGACCAGT",3,303.56,10.68,-0.09,0.04,2.94,1.03,0,"1 nonsynonymous","T63E",1
"lib1","SARS-CoV-2","GACGCACCAACTGAGT",4,47.47,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P82K I88T N120E S184F P197C",5
"lib1","SARS-CoV-2","GACGCACCGAAATTTG",1,18.53,6,-4.76,1,1.5,1.19,0.01,">1 nonsynonymous","I2Q K56A A105V N130Y E135H E141L F167L L187I",8
"lib1","SARS-CoV-2","GACGCACGGATTCTTT",3,6.55,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N13V P82V",2
"lib1","SARS-CoV-2","GACGCACGTATCTTCA",1,5.65,10.9,0.13,0.16,2.82,1.09,0.01,"1 nonsynonymous","K114E",1
"lib1","SARS-CoV-2","GACGCACGTCCTCAAT",8,92.94,10.33,-0.44,0.05,2.89,1.03,0,">1 nonsynonymous","A42L K87I S139H",3
"lib1","SARS-CoV-2","GACGCACGTGTGTTGG",1,81.38,8.26,-2.51,0.15,2.32,1.09,0.01,">1 nonsynonymous","A14S L60K P149D F160V G166K",5
"lib1","SARS-CoV-2","GACGCAGAAAAAGCCG",2,7.26,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T55C L122R N157V G174Q",4
"lib1","SARS-CoV-2","GACGCAGATAAAAAAC",2,52.15,10.21,-0.55,0.05,2.79,1.07,0,"1 nonsynonymous","N24I",1
"lib1","SARS-CoV-2","GACGCAGCACCTTCTA",1,23.37,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L38P N92F R124S",3
"lib1","SARS-CoV-2","GACGCAGCGACAACCA",3,58.31,9.95,-0.81,0.1,2.32,1.06,0.01,">1 nonsynonymous","T3H P82V H189N",3
"lib1","SARS-CoV-2","GACGCAGGATTAAGTT",2,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I S45L D97I S113M K199I",5
"lib1","SARS-CoV-2","GACGCAGGCTTATACT",2,16.77,6.92,-3.84,0.69,1.5,1.25,0.07,">1 nonsynonymous","A22S W106S P177C",3
"lib1","SARS-CoV-2","GACGCATAAAGTGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M K56R D97K",3
"lib1","SARS-CoV-2","GACGCATAACCGAGTG",6,76.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R124G S129Y D137L",3
"lib1","SARS-CoV-2","GACGCATACCTATGTT",1,46.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N30A L60P P96H V153K V180F",5
"lib1","SARS-CoV-2","GACGCATATAGTTTCG",3,76.96,10.75,-0.02,0.05,2.92,1.04,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","GACGCATCCTGCTCAC",1,9.76,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D34V N92S G146N",3
"lib1","SARS-CoV-2","GACGCATTAAATTTAG",2,20.49,7.97,-2.8,0.37,1.5,1.09,0.07,">1 nonsynonymous","I2Q G86S G116W I138N",4
"lib1","SARS-CoV-2","GACGCATTACCTCATA",14,161.99,9.42,-1.34,0.1,1.84,1.1,0,">1 nonsynonymous","I2A I28E K128D T140Q",4
"lib1","SARS-CoV-2","GACGCATTATAAGATA",3,23.73,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C6G Y35L F62S N107L",4
"lib1","SARS-CoV-2","GACGCCACCCCTATAC",2,29.51,10.77,0,0.1,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGCCAGAAAGGTAT",7,54.04,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G101P E135N V182A",3
"lib1","SARS-CoV-2","GACGCCAGCACCGTAC",2,47.26,10.75,-0.01,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGCCCAACCCCGCT",2,51.8,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A81Y A89T Y143H",3
"lib1","SARS-CoV-2","GACGCCCACACCTCGT",7,55.04,6,-4.76,2,3,1.19,0,">1 nonsynonymous","L5S T100H S108P",3
"lib1","SARS-CoV-2","GACGCCCCAACGGCAA",8,164.15,10.58,-0.18,0.04,2.9,1.02,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","GACGCCCCGAAATCGA",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Q84Y D98G V103T N107T P161N",6
"lib1","SARS-CoV-2","GACGCCCCGGACCAAT",8,64.39,6,-4.76,2,1.5,1.22,0.03,"1 nonsynonymous","N92E",1
"lib1","SARS-CoV-2","GACGCCCGAGACGTGG",2,6.95,7.61,-3.16,0.36,1.5,1.08,0.04,">1 nonsynonymous","D90Y F99Y W106S G116E",4
"lib1","SARS-CoV-2","GACGCCGATCTACAAT",3,45.63,8.55,-2.22,0.22,1.5,1.14,0.02,">1 nonsynonymous","Y50C K56T",2
"lib1","SARS-CoV-2","GACGCCGCAACACATG",2,52.01,6,-4.76,1.34,1.5,1.14,0.01,">1 nonsynonymous","V37M V103C P161D",3
"lib1","SARS-CoV-2","GACGCCTATAAAATGA",2,1.92,NA,NA,NA,NA,NA,NA,"stop","C6* K114A I138E F160N",4
"lib1","SARS-CoV-2","GACGCCTCTGAATCTA",7,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H L187K",2
"lib1","SARS-CoV-2","GACGCGAACATAACGC",1,19.9,10.76,0,0.05,2.85,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGCGACCTATCTAC",2,80.35,9.89,-0.88,0.11,2.11,1.07,0,">1 nonsynonymous","L38M V52A K128R",3
"lib1","SARS-CoV-2","GACGCGACGAGAGGTC",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I F70T L125N P149T N157S R179T",6
"lib1","SARS-CoV-2","GACGCGACTAGACAGA",4,52.25,10.61,-0.15,0.09,2.88,1.07,0.01,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","GACGCGCGCTGAGATT",2,41.23,9.35,-1.42,0.11,2.06,1.07,0.01,">1 nonsynonymous","V11A R78S S164L",3
"lib1","SARS-CoV-2","GACGCGGCGAACGGAC",7,166.85,10.68,-0.09,0.04,2.95,1.02,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","GACGCGTAAGCTAGAT",7,111.19,8.82,-1.95,0.08,2.74,1.08,0,">1 nonsynonymous","N1P K114P E154N",3
"lib1","SARS-CoV-2","GACGCGTGAACCCCCC",1,23.03,9.84,-0.92,0.08,2.83,1.02,0,"1 nonsynonymous","S19Q",1
"lib1","SARS-CoV-2","GACGCGTGTAAGACAC",5,2.69,NA,NA,NA,NA,NA,NA,"stop","N4I F12L G51T L60S L95* F134I",6
"lib1","SARS-CoV-2","GACGCTAAAAGGACTA",2,11.16,10.56,-0.21,0.11,3,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACGCTAAACAGGTTC",1,3.59,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GACGCTAAACTTGAAT",2,0.61,NA,NA,NA,NA,NA,NA,"stop","S45* D98F W106K",3
"lib1","SARS-CoV-2","GACGCTAACATTGTGC",4,0,NA,NA,NA,NA,NA,NA,"stop","E10* K48I N120* P191S",4
"lib1","SARS-CoV-2","GACGCTACCAATACAG",9,124.16,9.94,-0.82,0.08,1.98,1.03,0,">1 nonsynonymous","A22L Q84E E186Y",3
"lib1","SARS-CoV-2","GACGCTACTGTCCAAA",1,22.16,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","Y93Q",1
"lib1","SARS-CoV-2","GACGCTATAGCTTTAG",2,44.56,10.16,-0.61,0.1,2.71,1,0,">1 nonsynonymous","A42K V65W",2
"lib1","SARS-CoV-2","GACGCTCAAGTACCAA",2,42.34,10.68,-0.08,0.09,2.7,1.09,0,"1 nonsynonymous","N130P",1
"lib1","SARS-CoV-2","GACGCTCACGATAAAA",1,26.46,10.77,0.01,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGCTCATTAAATTT",27,212.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V F99Y F160Y",3
"lib1","SARS-CoV-2","GACGCTCTCTGCTATT",2,19.44,9.38,-1.38,0.37,1.5,1.18,0.05,">1 nonsynonymous","P133K Y178M",2
"lib1","SARS-CoV-2","GACGCTGACGTAGTTC",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A N118T",2
"lib1","SARS-CoV-2","GACGCTGATATTCACA",9,90.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T A81L I88S D97A I104S L131V",6
"lib1","SARS-CoV-2","GACGCTGCAATATTCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","GACGCTGCACAGCTCT",6,58.83,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V11G W23N C61L",3
"lib1","SARS-CoV-2","GACGCTGTATGGAGTA",2,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92T T100N",2
"lib1","SARS-CoV-2","GACGCTGTCATACTGG",1,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34K F44E R73Y D90I F156R",5
"lib1","SARS-CoV-2","GACGCTTAGGCTTAAT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","F17S I28* A105*",3
"lib1","SARS-CoV-2","GACGCTTGATTTCCAC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D59E G117V K128E F134S Y175*",5
"lib1","SARS-CoV-2","GACGCTTGTCAAATAT",2,24.18,9.37,-1.39,0.23,1.74,1.04,0.04,">1 nonsynonymous","T85E D90I G116S K198Y",4
"lib1","SARS-CoV-2","GACGCTTTGACAGTAT",6,49.04,8.73,-2.03,0.1,2.35,1.15,0,">1 nonsynonymous","C31S N120A G174L A190L",4
"lib1","SARS-CoV-2","GACGGAATTTTCATAA",11,0.14,NA,NA,NA,NA,NA,NA,"stop","K56* A105T L183C",3
"lib1","SARS-CoV-2","GACGGACATTGTTGCG",1,6.88,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","K56I D97T R179W",3
"lib1","SARS-CoV-2","GACGGACCGAGCATTC",2,23.97,6.03,-4.73,0.67,1.5,1.16,0.01,">1 nonsynonymous","G152S Y175I",2
"lib1","SARS-CoV-2","GACGGACGGTCCGATA",7,123.09,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y35K R127P N151K",3
"lib1","SARS-CoV-2","GACGGAGTGAGTAATA",3,105.15,9.93,-0.83,0.14,2.29,1.05,0.01,">1 nonsynonymous","F62G Q84R G152S",3
"lib1","SARS-CoV-2","GACGGAGTTCGTGAAA",3,21.26,6,-4.76,2,1.5,1.24,0.08,">1 nonsynonymous","V11C T100P V173S",3
"lib1","SARS-CoV-2","GACGGAGTTTGAGGTT",2,45.36,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T55E L95S F167L",3
"lib1","SARS-CoV-2","GACGGATAGACTCTGC",6,0.48,NA,NA,NA,NA,NA,NA,"stop","N107* R127V",2
"lib1","SARS-CoV-2","GACGGATATTAATATT",2,20.38,6.58,-4.19,0.26,1.91,1.07,0.01,">1 nonsynonymous","S29T F47Y V103E Y159L Q168S",5
"lib1","SARS-CoV-2","GACGGATCAATAAAGT",5,46.91,10.82,0.06,0.08,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGGATGGTCAAATA",5,0.63,NA,NA,NA,NA,NA,NA,"stop","F44T F99P K128*",3
"lib1","SARS-CoV-2","GACGGCACCGGAAAAT",6,77.56,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V20M A81G",2
"lib1","SARS-CoV-2","GACGGCAGACGATACG",6,143.77,10.26,-0.5,0.04,2.78,1.02,0,">1 nonsynonymous","L60W D98A",2
"lib1","SARS-CoV-2","GACGGCAGGATATAAT",2,55.92,10.42,-0.34,0.07,2.92,1.04,0,">1 nonsynonymous","C61F S69T V173L",3
"lib1","SARS-CoV-2","GACGGCATAGGGATAA",2,27.81,10.57,-0.2,0.1,2.84,1.04,0,">1 nonsynonymous","I2L S41T T100I G116L",4
"lib1","SARS-CoV-2","GACGGCCATGGAATCA",2,8.51,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L131V Q168S P177E",3
"lib1","SARS-CoV-2","GACGGCCTACCTTGAT",2,5.53,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","T3V S19K S29A F70W",4
"lib1","SARS-CoV-2","GACGGCCTAGAGATGA",8,1.35,NA,NA,NA,NA,NA,NA,"stop","I104* R124Q",2
"lib1","SARS-CoV-2","GACGGCGAGATGGTTG",12,524.03,7.85,-2.92,0.21,1.5,1.03,0.01,">1 nonsynonymous","K56V T85L P177S T201K",4
"lib1","SARS-CoV-2","GACGGCTGCGAAGCTA",7,3.74,NA,NA,NA,NA,NA,NA,"stop","A18W R25S L57*",3
"lib1","SARS-CoV-2","GACGGGAAAAGAAACA",5,25.74,11.01,0.25,0.07,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGGGACTCTGACAA",9,233.24,10.17,-0.6,0.05,2.7,1,0,">1 nonsynonymous","Y35H P54S",2
"lib1","SARS-CoV-2","GACGGGAGTTATAATA",5,34.1,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C61L G86I Y119L",3
"lib1","SARS-CoV-2","GACGGGCCTAAAGCCC",2,43.45,10.25,-0.51,0.05,2.88,1.03,0,">1 nonsynonymous","F44K N110M",2
"lib1","SARS-CoV-2","GACGGGCGAACCATTA",1,36.99,6.12,-4.64,0.75,1.5,1.14,0.02,">1 nonsynonymous","R16P V37R K114S P161C",4
"lib1","SARS-CoV-2","GACGGGGACAGCGATA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","D98C Y119* I142L V153D Q168S",5
"lib1","SARS-CoV-2","GACGGGGAGTATCGGT",3,37.13,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N92R L131V N157K F167R",4
"lib1","SARS-CoV-2","GACGGGGATAGTGACA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","I88* Y178H",2
"lib1","SARS-CoV-2","GACGGGGCAAAAATCA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I I28F G83L G101A",4
"lib1","SARS-CoV-2","GACGGGTCAAGTGAAA",1,4.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","GACGGGTTAACCTCAA",11,128.79,9.76,-1,0.08,2.62,1.09,0,">1 nonsynonymous","V153N P161S A190N",3
"lib1","SARS-CoV-2","GACGGTAACACTCCCG",1,48.31,10.5,-0.26,0.07,2.95,1.01,0,"1 nonsynonymous","K56F",1
"lib1","SARS-CoV-2","GACGGTAAGTACCCCA",2,31.17,10.67,-0.09,0.09,2.89,1.07,0,"1 nonsynonymous","P54Y",1
"lib1","SARS-CoV-2","GACGGTACAATTAAGA",8,88.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12R R124L F160M",3
"lib1","SARS-CoV-2","GACGGTCAAAATTTCA",1,25.14,8.55,-2.21,0.37,1.5,1.04,0.06,">1 nonsynonymous","Y91M R127L",2
"lib1","SARS-CoV-2","GACGGTCCAGTTGATG",2,124.19,10.75,-0.02,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGGTCCCGTAAACT",3,63.18,10.83,0.07,0.08,2.93,1.03,0,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","GACGGTCGATATGGGA",5,31.77,6.62,-4.14,0.74,1.5,1.21,0.07,">1 nonsynonymous","W106C L131F Q163E",3
"lib1","SARS-CoV-2","GACGGTCGCATAACAA",2,30.51,10.47,-0.3,0.08,2.95,1,0,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","GACGGTCTAATCTAAA",11,3,NA,NA,NA,NA,NA,NA,"stop","S45N C61P K198*",3
"lib1","SARS-CoV-2","GACGGTCTTAACGCTA",7,75.97,7.16,-3.61,0.27,1.5,1.21,0.02,">1 nonsynonymous","W106C V115C",2
"lib1","SARS-CoV-2","GACGGTGAGGCCGAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","F44T P82* L125P G174L",4
"lib1","SARS-CoV-2","GACGGTGGTAATATCA",1,7.21,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G9E T55V D68T A105V A145G G152D P169L",7
"lib1","SARS-CoV-2","GACGGTGTCAAGAATG",4,0.53,NA,NA,NA,NA,NA,NA,"stop","G9* R27D G86D K114T S184V",5
"lib1","SARS-CoV-2","GACGGTTCGATGGCTA",2,2.42,NA,NA,NA,NA,NA,NA,"stop","A33Y G86A K94S G101* Y123K P177V",6
"lib1","SARS-CoV-2","GACGGTTTATAATGGT",4,28.06,6.83,-3.93,0.35,1.5,1.11,0.02,">1 nonsynonymous","C6F D90G Y121L S147M",4
"lib1","SARS-CoV-2","GACGGTTTTAACTCAA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","A81* K87I D112V S129C",4
"lib1","SARS-CoV-2","GACGTAAAAAAAAACA",1,14.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61A S139W",2
"lib1","SARS-CoV-2","GACGTAAAATGCCCAA",1,32.5,9.66,-1.11,0.15,1.88,1.1,0.01,">1 nonsynonymous","L60I P96M L122Q",3
"lib1","SARS-CoV-2","GACGTAAATCTTATAA",4,35.64,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D59P P82K Y143R G155Y",4
"lib1","SARS-CoV-2","GACGTAACACTGACGG",1,25.08,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S43W D59T L162R G174R",4
"lib1","SARS-CoV-2","GACGTAAGCGTAGCCT",3,67.65,10.78,0.02,0.06,2.92,1.03,0,">1 nonsynonymous","R16Q K128Y T148S",3
"lib1","SARS-CoV-2","GACGTAAGCTATACGT",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S L122W",2
"lib1","SARS-CoV-2","GACGTAATAAAAAACA",5,87.26,10.21,-0.56,0.11,2.74,1,0,">1 nonsynonymous","A14V A190V",2
"lib1","SARS-CoV-2","GACGTACGACACAGAT",15,229.72,9.78,-0.98,0.07,1.93,1.07,0,">1 nonsynonymous","V37M A81Y E154S",3
"lib1","SARS-CoV-2","GACGTACTCCACAAAA",2,115,10.71,-0.06,0.04,2.96,1.01,0,"1 nonsynonymous","F160E",1
"lib1","SARS-CoV-2","GACGTACTCTCAGTCG",3,75.76,10.56,-0.2,0.05,2.93,1,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","GACGTAGAATCGCCTA",8,69.54,10.62,-0.15,0.07,2.82,1.07,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","GACGTAGATTAGTAGC",7,146.65,10.6,-0.17,0.03,2.87,1.06,0,">1 nonsynonymous","L122K G146D",2
"lib1","SARS-CoV-2","GACGTAGCAAAAGCCG",8,51.21,10.43,-0.33,0.07,2.91,1.04,0,">1 nonsynonymous","T100A S147L",2
"lib1","SARS-CoV-2","GACGTATAATGAGGAC",4,29.02,7.63,-3.13,0.26,1.64,1.2,0.02,">1 nonsynonymous","D59Q K94T",2
"lib1","SARS-CoV-2","GACGTATACCTCGGTC",3,10.07,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","I72N",1
"lib1","SARS-CoV-2","GACGTATAGAAACCGA",2,39.9,8.28,-2.48,0.27,1.58,1.27,0.02,">1 nonsynonymous","F8S N24S Q84I",3
"lib1","SARS-CoV-2","GACGTATTTATTGCCA",1,8.88,6.12,-4.65,0.76,3,1.14,0.01,">1 nonsynonymous","K56M K114C R124G",3
"lib1","SARS-CoV-2","GACGTCAAATGCACGC",1,21.86,9.95,-0.82,0.14,2.16,1.02,0.01,">1 nonsynonymous","C102I K128C T201W",3
"lib1","SARS-CoV-2","GACGTCAATGACAATA",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M K56L G155P",3
"lib1","SARS-CoV-2","GACGTCCCAACATAAA",1,13.38,9.7,-1.06,0.35,1.5,1,0.07,">1 nonsynonymous","Y50C N118Q",2
"lib1","SARS-CoV-2","GACGTCCCATGAGCTT",3,29.65,6.53,-4.23,0.34,1.5,1.12,0.01,">1 nonsynonymous","T63L N157V",2
"lib1","SARS-CoV-2","GACGTCCTACGTTATG",2,51.63,9.87,-0.89,0.11,1.9,1.04,0,">1 nonsynonymous","Q84V F99I",2
"lib1","SARS-CoV-2","GACGTCCTGATTTCAG",3,44.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W106F S139F N157S N171S",4
"lib1","SARS-CoV-2","GACGTCGCGGTAGATT",4,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F T85I T100P G116R T170S",5
"lib1","SARS-CoV-2","GACGTCTATTCTGACA",5,86.48,8.44,-2.32,0.11,2.55,1.09,0,">1 nonsynonymous","R16K P54T P149H G166W V173H",5
"lib1","SARS-CoV-2","GACGTCTTAAAACCTG",1,19.27,8.64,-2.13,0.18,1.69,1.19,0.01,">1 nonsynonymous","P7V Y91S",2
"lib1","SARS-CoV-2","GACGTCTTCATACCCC",4,47.53,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N107Y I142T",2
"lib1","SARS-CoV-2","GACGTCTTGCATAGAA",16,134.16,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D112A N171L",2
"lib1","SARS-CoV-2","GACGTCTTTGCTGCTA",2,21.07,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I2V N4K N64Q V71H L122P V181M T201R",7
"lib1","SARS-CoV-2","GACGTGAATTCGTGTG",4,1.74,NA,NA,NA,NA,NA,NA,"stop","F44L C158*",2
"lib1","SARS-CoV-2","GACGTGAGAACCATTA",2,26.12,7.49,-3.28,0.26,1.5,1.11,0.02,">1 nonsynonymous","P82S G174R",2
"lib1","SARS-CoV-2","GACGTGAGAACTCCAT",4,22.45,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","E10Q A22V S45Y D68A L95H K128D P149V",7
"lib1","SARS-CoV-2","GACGTGATTTACCAAT",8,27.48,7.72,-3.04,0.39,1.5,1.08,0.05,">1 nonsynonymous","V11D W23V",2
"lib1","SARS-CoV-2","GACGTGCCTTTGGTAA",3,44.7,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N1S W23R P54H R73A R179C",5
"lib1","SARS-CoV-2","GACGTGCGATACGTAT",3,17.35,6,-4.76,1.55,1.5,1.18,0.02,">1 nonsynonymous","E10T N40Y Y119W Y143F N151L Y165Q",6
"lib1","SARS-CoV-2","GACGTGCGGCACTTTT",3,43.82,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","T63P Y93K D112N F134S I138L",5
"lib1","SARS-CoV-2","GACGTGGTACCAATAT",7,120.35,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2P V37K A105Q G166D",4
"lib1","SARS-CoV-2","GACGTGTTCTGATGTT",1,14.72,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y50L G86D N118S",3
"lib1","SARS-CoV-2","GACGTTAAAAACAAAC",2,49.91,10.85,0.09,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGTTAAACCCAGAC",4,461.59,8.74,-2.03,0.08,2.88,1.04,0,">1 nonsynonymous","L5G S19N G166H",3
"lib1","SARS-CoV-2","GACGTTACAGTATTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","E76* E135N G196A",3
"lib1","SARS-CoV-2","GACGTTACGCGCACGG",12,2,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib1","SARS-CoV-2","GACGTTAGCGATGATG",7,29.87,8.32,-2.44,0.16,2.39,1.02,0.01,">1 nonsynonymous","Y119V G174I",2
"lib1","SARS-CoV-2","GACGTTAGTGAGCCTA",4,54.22,9.8,-0.96,0.1,2.08,1.07,0,">1 nonsynonymous","G9R A67S",2
"lib1","SARS-CoV-2","GACGTTATAAATCAGA",4,1.09,NA,NA,NA,NA,NA,NA,"stop","G146* S200T",2
"lib1","SARS-CoV-2","GACGTTATATAAAATT",9,40.32,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N64K D90Y S139P S147Y G152T",5
"lib1","SARS-CoV-2","GACGTTATATTCAGAC",2,14.88,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","P133L Q163P Y175K",3
"lib1","SARS-CoV-2","GACGTTCAATTACTGT",4,14.8,6.41,-4.36,0.4,1.5,1.11,0.02,"1 nonsynonymous","N92K",1
"lib1","SARS-CoV-2","GACGTTCATACAAGAT",13,220.85,10,-0.76,0.05,2.88,1.06,0,">1 nonsynonymous","Y35W K87D S200V",3
"lib1","SARS-CoV-2","GACGTTCGCGCACACA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","N120* C158V",2
"lib1","SARS-CoV-2","GACGTTGAACAAAATC",7,56.41,10.83,0.07,0.09,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GACGTTGACAAAGAAT",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S53Y N58C F70T F99Q",5
"lib1","SARS-CoV-2","GACGTTGGGGTTCTCC",3,32.66,10.15,-0.62,0.08,2.75,1,0,">1 nonsynonymous","D97F S184R",2
"lib1","SARS-CoV-2","GACGTTGTATATAAAG",15,184.35,10.14,-0.62,0.04,2.95,1,0,">1 nonsynonymous","V37Q T55V G146S Q168M",4
"lib1","SARS-CoV-2","GACGTTTAGCCCATGA",2,1.75,NA,NA,NA,NA,NA,NA,"stop","C6T D98N G116W Y123* F156L",5
"lib1","SARS-CoV-2","GACGTTTATTGTCGTA",5,82.14,8.9,-1.87,0.1,2.58,1.13,0,">1 nonsynonymous","V37S D98L G166C",3
"lib1","SARS-CoV-2","GACGTTTCTACCGCCT",2,60.13,10.37,-0.39,0.06,2.75,1.05,0,"1 nonsynonymous","N13R",1
"lib1","SARS-CoV-2","GACGTTTGTGACACTA",4,43.44,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V71E K114E I142S",3
"lib1","SARS-CoV-2","GACGTTTTCAGTGATT",2,14.56,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I80R I142K",2
"lib1","SARS-CoV-2","GACGTTTTGACCGTTG",4,68.48,9.22,-1.54,0.07,2.79,1.1,0,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","GACGTTTTTTGTACTA",3,5.94,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","S41H K56Y I104L D137L",4
"lib1","SARS-CoV-2","GACTAAAAACAGTTGT",2,9.44,10.73,-0.03,0.2,2.81,1.1,0.01,">1 nonsynonymous","V32F N110K",2
"lib1","SARS-CoV-2","GACTAAAACATAATAA",1,52.06,10.12,-0.65,0.13,2.3,1.06,0.01,">1 nonsynonymous","S36I T100D",2
"lib1","SARS-CoV-2","GACTAAAACCCTTGTT",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P S45V C49Y A89D E135S G174D",6
"lib1","SARS-CoV-2","GACTAAAAGCGAACGG",1,21.49,8.27,-2.49,0.21,1.75,1.2,0.02,">1 nonsynonymous","R73M F134Q G146T",3
"lib1","SARS-CoV-2","GACTAAAAGGCGAGCT",3,47.82,8.81,-1.95,0.16,2.01,1.1,0.01,">1 nonsynonymous","Y50S G174L",2
"lib1","SARS-CoV-2","GACTAAAATAAGTCAG",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y G86W N120C",3
"lib1","SARS-CoV-2","GACTAAAATAATTAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","W106* P133T C150L",3
"lib1","SARS-CoV-2","GACTAAAATATAGTAC",16,246.28,10.16,-0.61,0.05,2.82,1.04,0,"1 nonsynonymous","Y35Q",1
"lib1","SARS-CoV-2","GACTAAACAGGCAGTT",3,58.27,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","V52L D68K S129G Q168R T201S",5
"lib1","SARS-CoV-2","GACTAAACATACTAAT",4,36.38,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","G101P T201I",2
"lib1","SARS-CoV-2","GACTAAACTATTCAGA",4,40.59,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G116R E135C A145W A190S",4
"lib1","SARS-CoV-2","GACTAAAGAAAAGATA",2,2.36,NA,NA,NA,NA,NA,NA,"stop","N130F S139Y C150* L162P V173S K198T",6
"lib1","SARS-CoV-2","GACTAAAGATCTAAGG",6,3.95,NA,NA,NA,NA,NA,NA,"stop","T15S F44L N92*",3
"lib1","SARS-CoV-2","GACTAAAGCAAAGGAA",8,61.29,6.42,-4.34,0.4,1.5,1.15,0.01,">1 nonsynonymous","K94A N107F",2
"lib1","SARS-CoV-2","GACTAAAGCATTTAAA",1,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","GACTAAAGTATGGCCA",10,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P N107F L122K T140I",4
"lib1","SARS-CoV-2","GACTAAAGTGTAACAT",3,37.29,10.81,0.05,0.11,2.91,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GACTAAAGTTCCCTGC",1,16.59,10.74,-0.03,0.08,2.89,1.02,0.01,">1 nonsynonymous","E10D T140D",2
"lib1","SARS-CoV-2","GACTAAATAATATCAA",2,30.06,10.03,-0.73,0.38,1.5,1,0.06,">1 nonsynonymous","S53F N107Y",2
"lib1","SARS-CoV-2","GACTAAATAGACCAAC",1,17.04,10.67,-0.1,0.17,2.68,1.06,0.01,">1 nonsynonymous","N13S C61R",2
"lib1","SARS-CoV-2","GACTAAATCAAATGGA",2,25.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F Y50L C61V",3
"lib1","SARS-CoV-2","GACTAAATTAGGCCCA",6,26.33,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N24H W106K S113V Y119S P161K",5
"lib1","SARS-CoV-2","GACTAACAATATACCA",2,43.22,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T100L N107F",2
"lib1","SARS-CoV-2","GACTAACATCACAACC",5,27.71,6.15,-4.62,0.92,1.5,1.13,0.02,">1 nonsynonymous","Y50D L122V S129R P161T",4
"lib1","SARS-CoV-2","GACTAACATTCCGCAA",3,110.68,10.13,-0.64,0.05,2.8,1.02,0,">1 nonsynonymous","S36V F44W P96S L122Q N151I G155S",6
"lib1","SARS-CoV-2","GACTAACCACAATAAG",6,0.58,NA,NA,NA,NA,NA,NA,"stop","G152Y C158*",2
"lib1","SARS-CoV-2","GACTAACCTGAATTCA",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L V103R Q163G",3
"lib1","SARS-CoV-2","GACTAACCTGCTAATA",7,18.09,6.47,-4.3,0.48,1.5,1.2,0.02,">1 nonsynonymous","D34N L57G N64E K87E Y159H",5
"lib1","SARS-CoV-2","GACTAACGAAATCCAA",1,72.69,9.33,-1.43,0.06,2.64,1.11,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","GACTAACGCATTTACT",2,29.92,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A22S T55W P177I",3
"lib1","SARS-CoV-2","GACTAACGGATTCTAA",1,10.9,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","W23M N40T D59V T100S S113M T201S",6
"lib1","SARS-CoV-2","GACTAACGTCCTCAAA",1,29.48,8.78,-1.99,0.24,1.5,1.17,0.03,">1 nonsynonymous","R16L D137V",2
"lib1","SARS-CoV-2","GACTAACTGGATTCAA",9,48.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61R I80M C150F",3
"lib1","SARS-CoV-2","GACTAAGACCTATACA",5,53.39,10.75,-0.02,0.08,2.86,1.06,0,">1 nonsynonymous","L5Y E141Q",2
"lib1","SARS-CoV-2","GACTAAGAGCAGACAA",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25D S41K S53L Y121K C150S",5
"lib1","SARS-CoV-2","GACTAAGAGCCCTTAC",3,19.3,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14H W23Q G83R Y119L T140N",5
"lib1","SARS-CoV-2","GACTAAGATGGCCCTA",3,32.03,9.2,-1.56,0.11,1.83,1.13,0.01,">1 nonsynonymous","L5Q Y50I L60H",3
"lib1","SARS-CoV-2","GACTAAGCCTCTAACA",3,606.65,10.51,-0.26,0.02,2.92,1.03,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","GACTAAGTCAAAATGC",2,65.18,9.4,-1.36,0.05,2.78,1.14,0,">1 nonsynonymous","Y119T T148I",2
"lib1","SARS-CoV-2","GACTAAGTGAGCAAAT",3,80.05,10.66,-0.1,0.05,2.89,1.05,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","GACTAAGTTGACCGCT",2,7.43,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","D75K T100M A145G F185D",4
"lib1","SARS-CoV-2","GACTAATACCAACATA",3,58.11,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6G F47V G74S Y119V R136L G155I F167R Y175F",8
"lib1","SARS-CoV-2","GACTAATACTCTCTTA",3,98.38,10.73,-0.03,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTAATATGTACAAA",2,7.66,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P96F I104Q",2
"lib1","SARS-CoV-2","GACTAATCTTTACGGG",5,79.73,10.77,0,0.06,2.95,1.02,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","GACTAATGAGAGTCCT",3,24.71,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T15D Y91H F156N R179S",4
"lib1","SARS-CoV-2","GACTAATGCAACAATG",1,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","GACTAATTATCAGCAT",7,54.55,9.32,-1.45,0.12,1.75,1.16,0.01,"1 nonsynonymous","F8K",1
"lib1","SARS-CoV-2","GACTAATTCATTGGGG",1,15.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68A E76K",2
"lib1","SARS-CoV-2","GACTAATTCCAAAATT",12,147.46,10.65,-0.11,0.05,2.89,1.06,0,">1 nonsynonymous","E141D S164F",2
"lib1","SARS-CoV-2","GACTAATTCCAATGCT",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L N92A A105C Y119R",4
"lib1","SARS-CoV-2","GACTAATTTGTACGAA",4,45.47,9.28,-1.48,0.32,1.5,1,0.05,">1 nonsynonymous","T3M R124G V173D P191Y",4
"lib1","SARS-CoV-2","GACTACAAACAATACG",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L P96F G116A K198T",4
"lib1","SARS-CoV-2","GACTACAAATTACTTA",8,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66H Y123D",2
"lib1","SARS-CoV-2","GACTACAAGCAAATAA",5,123.45,10.68,-0.08,0.05,2.9,1.05,0,"1 nonsynonymous","T85Y",1
"lib1","SARS-CoV-2","GACTACACGAAAATTC",1,5.01,8.38,-2.38,0.39,1.92,1.07,0.03,">1 nonsynonymous","F8A A67F Q168A",3
"lib1","SARS-CoV-2","GACTACACGAAACAAG",8,22.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3V F70S N92A L162K",4
"lib1","SARS-CoV-2","GACTACACGCACATAT",5,1.89,NA,NA,NA,NA,NA,NA,"stop","N64H Y66* N107*",3
"lib1","SARS-CoV-2","GACTACACTAAGGGCA",6,198.1,10.08,-0.68,0.04,2.84,1.02,0,">1 nonsynonymous","Y66S G174S",2
"lib1","SARS-CoV-2","GACTACAGGCTGTGAT",7,73.24,10.78,0.01,0.11,2.74,1,0,"1 nonsynonymous","G152S",1
"lib1","SARS-CoV-2","GACTACAGTACACATG",3,43.05,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6V C61L R127W",3
"lib1","SARS-CoV-2","GACTACATATTCAAAG",3,65.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55F D90V N157K",3
"lib1","SARS-CoV-2","GACTACATTCACCATG",1,22.64,10.87,0.1,0.05,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTACCAGTACACTA",15,185.1,10.28,-0.48,0.05,2.84,1.05,0,">1 nonsynonymous","L60S E141L",2
"lib1","SARS-CoV-2","GACTACGAAAGTTCAA",3,37.74,6.71,-4.06,0.52,1.5,1.31,0.04,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","GACTACGTGAAAATAA",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71W K199L",2
"lib1","SARS-CoV-2","GACTACTAAAGGATAA",7,81.53,10.51,-0.25,0.04,2.93,1,0,">1 nonsynonymous","T100S G152S",2
"lib1","SARS-CoV-2","GACTACTACAAGAGCG",1,28.23,8.11,-2.66,0.36,1.5,1.09,0.05,">1 nonsynonymous","E154L Y165R",2
"lib1","SARS-CoV-2","GACTACTACAATTTTG",3,29.65,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36R N64Q D97T E141F R179M",5
"lib1","SARS-CoV-2","GACTACTGGATCTATA",14,130.15,6.34,-4.43,0.52,1.5,1.15,0.02,">1 nonsynonymous","F44S F167L K198F",3
"lib1","SARS-CoV-2","GACTACTTGGAAAAGA",5,1.39,NA,NA,NA,NA,NA,NA,"stop","C6G N13* A42L P149F",4
"lib1","SARS-CoV-2","GACTAGAAAACACTCA",6,148.68,10.73,-0.03,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTAGAATATACGGC",6,67.83,10.07,-0.69,0.07,2.42,1.11,0,">1 nonsynonymous","T15G N120F L187Q",3
"lib1","SARS-CoV-2","GACTAGAATCTCTCAA",2,19.8,10.62,-0.15,0.16,2.92,1.03,0.01,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","GACTAGACACACTTCG",13,79.43,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33S P82D K128R",3
"lib1","SARS-CoV-2","GACTAGACGAGTGCCT",6,46.59,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G86C V103L",2
"lib1","SARS-CoV-2","GACTAGCAGAAAAACC",3,8.04,6.18,-4.58,1.57,1.61,1.26,0.08,">1 nonsynonymous","S45I F99I F126P",3
"lib1","SARS-CoV-2","GACTAGGAATTAAAGA",1,33.61,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","F12L F70C V115M",3
"lib1","SARS-CoV-2","GACTAGGATTTAAATG",5,35.21,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","V37T F99Q E141R",3
"lib1","SARS-CoV-2","GACTAGTAAGCCAGCA",1,6.96,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G9R P54V C61S K87S T100N Q168R P177N",7
"lib1","SARS-CoV-2","GACTAGTATTCCAGAG",4,74.73,10.18,-0.59,0.08,2.69,1.02,0,">1 nonsynonymous","A105G R136K",2
"lib1","SARS-CoV-2","GACTAGTGGACCCGAA",2,2.21,NA,NA,NA,NA,NA,NA,"stop","S19* S69R P177A",3
"lib1","SARS-CoV-2","GACTATAAAAAAACTA",1,12.39,9.89,-0.88,0.12,2.35,1.04,0,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","GACTATAACACTACCC",5,62.48,10.42,-0.35,0.06,2.88,1.03,0,">1 nonsynonymous","I2F E10I Y35I P54L E141D",5
"lib1","SARS-CoV-2","GACTATAACTCTGTAA",6,67.62,10.73,-0.04,0.05,2.9,1.04,0,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","GACTATAACTGTTCCG",7,94.32,10.87,0.1,0.06,2.91,1.04,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","GACTATAAGAAGAACC",5,4.81,NA,NA,NA,NA,NA,NA,"stop","G9L S41*",2
"lib1","SARS-CoV-2","GACTATAAGCTTGAGG",7,1.86,NA,NA,NA,NA,NA,NA,"stop","C61F F134* V173S",3
"lib1","SARS-CoV-2","GACTATAAGGGAAAAC",4,49.12,9.27,-1.49,0.19,1.8,1.15,0.01,">1 nonsynonymous","V77E T201Q",2
"lib1","SARS-CoV-2","GACTATACTCTAACAC",1,19.2,10.73,-0.04,0.03,2.94,1.04,0,">1 nonsynonymous","Y39S T55S P191E",3
"lib1","SARS-CoV-2","GACTATACTGTGTTAC",2,35.14,10.08,-0.68,0.1,2.42,1.02,0.01,">1 nonsynonymous","N13L S19P H189S",3
"lib1","SARS-CoV-2","GACTATACTTATACTA",3,41.67,10.58,-0.18,0.07,2.89,1.07,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","GACTATAGAAACACAA",9,45.25,6,-4.76,2,2.17,1.19,0.01,">1 nonsynonymous","V37N N58M L122A C150F",4
"lib1","SARS-CoV-2","GACTATAGAACCAACG",8,38.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T85G V103H L111K K199H",4
"lib1","SARS-CoV-2","GACTATATAAGATGAC",2,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139K S164V Q176H",3
"lib1","SARS-CoV-2","GACTATATACAATTAG",7,40.6,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F17A V65T K94D C102V L122V",5
"lib1","SARS-CoV-2","GACTATATACACCAAT",1,57.32,10.03,-0.73,0.09,2.37,1.05,0,"1 nonsynonymous","L131T",1
"lib1","SARS-CoV-2","GACTATATGCTCAGGG",2,6.3,10.84,0.08,0.14,2.95,1,0.01,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GACTATATGTTGGGAC",2,40.31,9.3,-1.46,0.13,2.02,1.09,0.01,">1 nonsynonymous","N40I C61S V173G",3
"lib1","SARS-CoV-2","GACTATCAAATCCGAC",2,13.16,7.41,-3.36,0.43,1.5,1.28,0.08,">1 nonsynonymous","W23K S41K D90I D97F V153Y F156L",6
"lib1","SARS-CoV-2","GACTATCACGTAACAA",4,20.37,10.19,-0.57,0.09,2.61,1.1,0,">1 nonsynonymous","D59E K87T W106F S164V K199N",5
"lib1","SARS-CoV-2","GACTATCAGTCATGAT",8,44.41,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V71Q H189Y K199I",3
"lib1","SARS-CoV-2","GACTATCATTCAGCAT",3,47.78,10.59,-0.17,0.06,2.96,1.02,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","GACTATCATTGAGTAC",2,6.12,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","S43W V103Q",2
"lib1","SARS-CoV-2","GACTATCCCAGCAACG",1,19.36,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P177L L183G",2
"lib1","SARS-CoV-2","GACTATCCTATGTATA",3,19.05,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","V52N P82D S129V",3
"lib1","SARS-CoV-2","GACTATCTGACGTTAT",12,157.9,10.7,-0.07,0.05,2.96,1.02,0,"1 nonsynonymous","T63D",1
"lib1","SARS-CoV-2","GACTATCTTCTTTGAG",3,3.17,NA,NA,NA,NA,NA,NA,"stop","L60P I80* S139C Q163V",4
"lib1","SARS-CoV-2","GACTATGAATATCTCC",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P N120C T148K",3
"lib1","SARS-CoV-2","GACTATGCATTGAAGT",1,7.92,10.79,0.03,0.23,2.74,1.19,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACTATGCCAAAAGTG",4,28.74,8.5,-2.27,0.15,1.5,1.07,0.02,">1 nonsynonymous","E10V L38R",2
"lib1","SARS-CoV-2","GACTATGCCATTCGCC",6,42.8,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W23V Y39L T55I S113H L131Q I138R",6
"lib1","SARS-CoV-2","GACTATGCCCTACATC",1,0.42,NA,NA,NA,NA,NA,NA,"stop","S29V V103R S113V Y119*",4
"lib1","SARS-CoV-2","GACTATGGAGTTATTT",3,14.05,6,-4.76,0.68,2.66,1.14,0.01,">1 nonsynonymous","C6S V37S F47A F99C S113L",5
"lib1","SARS-CoV-2","GACTATTAAAATGATT",5,50.51,10.72,-0.04,0.04,2.93,1,0,">1 nonsynonymous","G9N G51S",2
"lib1","SARS-CoV-2","GACTATTAGACGTGTC",3,157.47,6,-4.76,1.7,1.5,1.16,0.01,">1 nonsynonymous","Y39T T63A F99M Y175K",4
"lib1","SARS-CoV-2","GACTATTCGATTACCG",12,72.37,9.69,-1.07,0.12,1.91,1.1,0.01,">1 nonsynonymous","V11A S45N",2
"lib1","SARS-CoV-2","GACTATTGTGGAACTT",4,42.31,6.07,-4.69,0.48,1.5,1.07,0,">1 nonsynonymous","W23Y T55I I80R K94L G152S F156N",6
"lib1","SARS-CoV-2","GACTATTTAAATCAAG",3,38.69,10.57,-0.19,0.06,2.78,1,0,">1 nonsynonymous","N40Y T46S",2
"lib1","SARS-CoV-2","GACTATTTTAACCTAG",10,170.97,10.18,-0.58,0.06,2.69,1.02,0,">1 nonsynonymous","I28M A42D N58L Y66F F134L E141D",6
"lib1","SARS-CoV-2","GACTCAAAAAAGTTCA",3,34.85,6.13,-4.63,0.9,1.5,1.15,0.02,">1 nonsynonymous","I104P S129L Q176V",3
"lib1","SARS-CoV-2","GACTCAAAATCAATAA",6,35.77,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V11I F44Q D97I C102T",4
"lib1","SARS-CoV-2","GACTCAAAGAATATAA",2,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81E A89L K94S P149K",4
"lib1","SARS-CoV-2","GACTCAACAGGACGGC",3,6.49,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","P82V D112L",2
"lib1","SARS-CoV-2","GACTCAACTAGTTCAC",4,50.19,9.76,-1.01,0.14,1.86,1.06,0.01,">1 nonsynonymous","V11N D34N",2
"lib1","SARS-CoV-2","GACTCAACTGCAACTT",5,19.72,10.25,-0.52,0.09,2.51,1.01,0.01,">1 nonsynonymous","T15E K26W",2
"lib1","SARS-CoV-2","GACTCAATAATAGTAG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","F8S N58P P96Q W106* Q168I",5
"lib1","SARS-CoV-2","GACTCACAAAAAGGTA",5,75.29,10.81,0.04,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTCACATCATAACC",2,45.48,9.96,-0.81,0.08,2.5,1.03,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","GACTCACCCAGCCAAG",8,162.03,10.66,-0.1,0.04,2.92,1.03,0,"1 nonsynonymous","S41K",1
"lib1","SARS-CoV-2","GACTCACCTATTCGGA",1,46.35,10.73,-0.03,0.09,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTCACCTTCAAAAA",3,115.83,10.71,-0.06,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTCACCTTCAAATC",4,60.03,8.43,-2.33,0.15,2.67,1.13,0.01,">1 nonsynonymous","Y35P T170C",2
"lib1","SARS-CoV-2","GACTCACCTTGAATCA",1,2.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134H",1
"lib1","SARS-CoV-2","GACTCACGACTGTTAT",1,24.53,9.92,-0.84,0.11,2.14,1.01,0.01,">1 nonsynonymous","W106R P169T",2
"lib1","SARS-CoV-2","GACTCACGGAAGCGAA",3,39.76,7.8,-2.97,0.17,1.68,1.06,0.01,">1 nonsynonymous","N110H R179S",2
"lib1","SARS-CoV-2","GACTCAGAAAAGGACT",2,69.5,10.59,-0.18,0.09,2.88,1.02,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","GACTCAGAGACAGGGT",3,105.48,10.7,-0.06,0.07,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GACTCAGGATGTAGAA",11,12.58,NA,NA,NA,NA,NA,NA,"stop","E10* G117R",2
"lib1","SARS-CoV-2","GACTCAGTACGATGGA",4,72.35,6,-4.76,1.05,1.5,1.15,0.02,">1 nonsynonymous","V37L N64I G101M N157F",4
"lib1","SARS-CoV-2","GACTCAGTTGGCCATT",8,87.76,7.07,-3.69,0.22,1.5,1.12,0.01,">1 nonsynonymous","A14R T46C K56M Y123C",4
"lib1","SARS-CoV-2","GACTCATATGGACCAG",1,49.52,10.25,-0.51,0.05,2.92,1.01,0,">1 nonsynonymous","L5C V37N Y121L",3
"lib1","SARS-CoV-2","GACTCATCCATATGTG",2,0.19,NA,NA,NA,NA,NA,NA,"stop","S29* T85L D97F G155A G174T",5
"lib1","SARS-CoV-2","GACTCCAATAACGATT",5,222.28,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W23V Y39K T46H Y91N L122G S129K F167G Y175E",8
"lib1","SARS-CoV-2","GACTCCAATGGCCAAA",1,33.55,10.71,-0.06,0.07,2.84,1.05,0,">1 nonsynonymous","L5H V173M",2
"lib1","SARS-CoV-2","GACTCCACCCCTGACT",1,52.03,10.54,-0.22,0.04,2.86,1.05,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","GACTCCAGAACATGTG",2,19.44,10.4,-0.37,0.11,2.7,1.28,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACTCCAGTGCAGTAT",3,53.33,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5T V71K G86S N120S T201E",5
"lib1","SARS-CoV-2","GACTCCATAATAAACA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","GACTCCATGCAAACCA",7,161.36,10.78,0.01,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTCCATGCCGCTCT",1,13.19,10.82,0.06,0.04,2.98,1.01,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","GACTCCCACTCACGTT",5,14.38,6,-4.76,1.54,3,1.19,0.01,">1 nonsynonymous","C31M N157S G174P F185K",4
"lib1","SARS-CoV-2","GACTCCCATCAGAATT",2,85.59,10.01,-0.75,0.08,2.31,1.02,0,">1 nonsynonymous","I28C K48E D90S",3
"lib1","SARS-CoV-2","GACTCCCCCTGTAACG",7,79.8,9.77,-0.99,0.12,1.86,1.05,0,">1 nonsynonymous","N24L P54R N130L E186S",4
"lib1","SARS-CoV-2","GACTCCGCTTTTGGTG",4,138.64,9.3,-1.47,0.12,2.02,1.11,0.01,">1 nonsynonymous","C6V L60V G152T",3
"lib1","SARS-CoV-2","GACTCCGTATCGAAGC",3,36.25,7.03,-3.74,0.25,1.5,1.23,0.01,">1 nonsynonymous","P96I N151S",2
"lib1","SARS-CoV-2","GACTCCGTATTGCCAT",10,54.12,10.48,-0.28,0.05,2.93,1.02,0,">1 nonsynonymous","G9R C61K K87F",3
"lib1","SARS-CoV-2","GACTCCGTCCCTCTAA",2,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V103H Q168H L183S",4
"lib1","SARS-CoV-2","GACTCCTATAAACCAA",6,108.31,9.55,-1.21,0.19,1.66,1.1,0.02,">1 nonsynonymous","V37L V77S",2
"lib1","SARS-CoV-2","GACTCCTCACGCTATT",7,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D V77W P96R D97N F160L",5
"lib1","SARS-CoV-2","GACTCCTGAAGTGGAT",2,20.94,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y50S P82Y R127H",3
"lib1","SARS-CoV-2","GACTCCTGATCCAGGT",3,24.21,10.22,-0.54,0.06,2.88,1.04,0,">1 nonsynonymous","Y35S K114V",2
"lib1","SARS-CoV-2","GACTCGAAACACCTGC",1,46.69,10.71,-0.05,0.09,2.94,1.06,0,">1 nonsynonymous","K56Q G152D",2
"lib1","SARS-CoV-2","GACTCGAAAGATATTA",3,66.06,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I138S G172Q",2
"lib1","SARS-CoV-2","GACTCGAAGATTGGCT",3,65.04,7.96,-2.8,0.11,1.82,1.14,0.01,">1 nonsynonymous","A14S S36P C61G P133W P197N",5
"lib1","SARS-CoV-2","GACTCGAATAAAGTAG",1,27.03,10.02,-0.75,0.11,2.91,1.01,0.01,">1 nonsynonymous","F47L G116L",2
"lib1","SARS-CoV-2","GACTCGAATAACCGTG",3,59.02,9.07,-1.69,0.11,2.67,1.13,0,">1 nonsynonymous","T3F N24R G117K T201S",4
"lib1","SARS-CoV-2","GACTCGACGAATTCAC",8,18.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6L T148F L183P",3
"lib1","SARS-CoV-2","GACTCGACGACAGACC",2,66.35,9.8,-0.96,0.08,2.46,1.03,0,">1 nonsynonymous","Y35R G155S",2
"lib1","SARS-CoV-2","GACTCGATAACTCGGC",8,49.16,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N1H V11N R16M L125V R127H Y143L K198G",7
"lib1","SARS-CoV-2","GACTCGCAGCTTTTTC",4,13.78,10.13,-0.64,0.31,2.49,1,0.05,">1 nonsynonymous","S43P V52I Q144R",3
"lib1","SARS-CoV-2","GACTCGCTCTCGATAT",4,58.3,10.16,-0.6,0.06,2.96,1,0,">1 nonsynonymous","S53L F156S",2
"lib1","SARS-CoV-2","GACTCGCTTTCTGATT",2,33.99,6,-4.76,1.62,1.5,1.18,0.01,">1 nonsynonymous","D68T G83R I88N N118I L131S F167L",6
"lib1","SARS-CoV-2","GACTCGGAAAATCAGT",1,3.49,NA,NA,NA,NA,NA,NA,"stop","T46I V52* C61A",3
"lib1","SARS-CoV-2","GACTCGGGAAAGTATG",4,1.17,NA,NA,NA,NA,NA,NA,"stop","D68* K94E",2
"lib1","SARS-CoV-2","GACTCGGTTTAAAAGC",4,59.2,8.99,-1.77,0.13,1.81,1.1,0.01,">1 nonsynonymous","A89V G155H",2
"lib1","SARS-CoV-2","GACTCGTAAACTAGGC",4,39.02,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V71R Y121C L131S",3
"lib1","SARS-CoV-2","GACTCGTATACAAAGA",4,56.73,9.84,-0.92,0.1,2.14,1.05,0,">1 nonsynonymous","I28K L122M",2
"lib1","SARS-CoV-2","GACTCGTTACTTTATA",7,178.55,7.96,-2.81,0.16,2.25,1.1,0.01,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","GACTCTACAAACAAGT",3,80.3,9.14,-1.62,0.09,2.45,1.1,0,">1 nonsynonymous","N107D Q163T T201P",3
"lib1","SARS-CoV-2","GACTCTACATCCAAGT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","S45E A81* F134S G166W",4
"lib1","SARS-CoV-2","GACTCTAGAATATTAA",9,5.45,NA,NA,NA,NA,NA,NA,"stop","A33D A81* T85M I88V P96L Y119R",6
"lib1","SARS-CoV-2","GACTCTATCTTTATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S29H T85G Y175*",3
"lib1","SARS-CoV-2","GACTCTATGAATTATA",2,64.98,9.87,-0.9,0.08,2.7,1.06,0,">1 nonsynonymous","G152I V173H",2
"lib1","SARS-CoV-2","GACTCTCAAGTACAAT",11,1.73,NA,NA,NA,NA,NA,NA,"stop","W106* R179N T201Q",3
"lib1","SARS-CoV-2","GACTCTCAGTTAGACG",5,23.53,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","T3V F47V L95S E141V N157V",5
"lib1","SARS-CoV-2","GACTCTCCCCAGTCAG",9,1.2,NA,NA,NA,NA,NA,NA,"stop","A89Y Y123N E154*",3
"lib1","SARS-CoV-2","GACTCTCGAGAACAAT",20,2.57,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib1","SARS-CoV-2","GACTCTCGTGGTTCTA",11,87.05,6.52,-4.24,0.38,1.5,1.14,0.02,">1 nonsynonymous","L38N G86T W106R",3
"lib1","SARS-CoV-2","GACTCTCTATACTTTC",3,77.22,10.69,-0.08,0.05,2.84,1.07,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","GACTCTGCAAGTTGAA",10,76.47,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","W106C N118A G166M G174Y",4
"lib1","SARS-CoV-2","GACTCTGGGTTGATGG",12,178.06,9.18,-1.58,0.07,2.6,1.11,0,">1 nonsynonymous","K87Q N107S",2
"lib1","SARS-CoV-2","GACTCTGGTTGCAAGG",2,13.23,9.14,-1.62,0.23,2.57,1.3,0.03,">1 nonsynonymous","D97S Y119I",2
"lib1","SARS-CoV-2","GACTCTGTACGTCCCC",4,24.25,10.45,-0.31,0.08,2.73,1.14,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","GACTCTGTTACAATCT",2,11.44,10.04,-0.73,0.17,2.73,1.07,0.01,">1 nonsynonymous","L60Q A89V",2
"lib1","SARS-CoV-2","GACTCTTCACAGTACG",8,463.76,10.68,-0.08,0.02,2.97,1,0,">1 nonsynonymous","G83Y N151E",2
"lib1","SARS-CoV-2","GACTCTTGAAAGTTGG",1,21.08,10.68,-0.08,0.19,2.89,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACTCTTGGAAATGTA",3,68.57,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N4D R127E Q176V",3
"lib1","SARS-CoV-2","GACTCTTGTGCTTTCG",4,8.67,6,-4.76,2,3,1.29,0.03,">1 nonsynonymous","T15I A89S D112N",3
"lib1","SARS-CoV-2","GACTCTTGTGGCAGGA",1,12.18,10.58,-0.19,0.12,2.91,1.04,0.01,">1 nonsynonymous","E10A R27V L60R",3
"lib1","SARS-CoV-2","GACTCTTTAAGCACGC",8,103.81,9.94,-0.82,0.11,2.29,1.06,0,">1 nonsynonymous","T46K C61T D98L",3
"lib1","SARS-CoV-2","GACTCTTTATTCCTTG",1,11.54,8.83,-1.94,0.39,1.5,1,0.07,">1 nonsynonymous","F12L A105V L122E E141L",4
"lib1","SARS-CoV-2","GACTCTTTTACAATAC",5,13.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15W Q84R G117S P161N",4
"lib1","SARS-CoV-2","GACTGAAAAATCACTC",2,0.7,NA,NA,NA,NA,NA,NA,"stop","V37S S45* D98P Y123S",4
"lib1","SARS-CoV-2","GACTGAAAATACAACA",7,78.98,9.69,-1.07,0.07,2.76,1.11,0,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","GACTGAAACCACCGAG",4,69.26,10.56,-0.2,0.08,2.89,1.08,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","GACTGAAACCGCTGCT",4,53.55,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K94T C158I",2
"lib1","SARS-CoV-2","GACTGAACAAGCCTAG",2,39.13,8.94,-1.82,0.08,2.93,1.05,0,">1 nonsynonymous","F44A Y119Q",2
"lib1","SARS-CoV-2","GACTGAACCGAAATGT",4,153.17,10.71,-0.05,0.04,2.88,1.08,0,">1 nonsynonymous","G9A T63S N151L",3
"lib1","SARS-CoV-2","GACTGAACGGACACTT",9,90.72,6.23,-4.53,0.51,1.5,1.18,0.01,">1 nonsynonymous","Y123L R127S P177A",3
"lib1","SARS-CoV-2","GACTGAAGATTATTCT",10,168,10.78,0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGAAGGCATTCCG",6,111.91,8.23,-2.54,0.22,1.5,1.13,0.02,">1 nonsynonymous","T85C Y123L Y143I",3
"lib1","SARS-CoV-2","GACTGAAGTTTCTAGG",3,270.1,10.34,-0.42,0.04,2.89,1.04,0,">1 nonsynonymous","T3F S184Q",2
"lib1","SARS-CoV-2","GACTGAATAAAATGAT",5,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I S139Q",2
"lib1","SARS-CoV-2","GACTGAATATACCAAA",5,49.08,9.97,-0.8,0.06,2.67,1.04,0,">1 nonsynonymous","F12L C31V V37D",3
"lib1","SARS-CoV-2","GACTGAATCTAAGTCA",2,56.06,10.53,-0.24,0.05,2.95,1,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","GACTGACAACTCAAAG",1,8.11,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T15D C150D",2
"lib1","SARS-CoV-2","GACTGACAAGTTGAAG",10,2.44,NA,NA,NA,NA,NA,NA,"stop","I2L Y35* F44L K114E",4
"lib1","SARS-CoV-2","GACTGACAATAGAAAA",3,16.2,6.22,-4.54,0.54,1.5,1.13,0.02,">1 nonsynonymous","R25L Y50S C61M",3
"lib1","SARS-CoV-2","GACTGACAGTAAGTAA",19,270.51,10.68,-0.08,0.05,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGACCACTTGGAC",4,157.79,10.59,-0.17,0.07,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGACCCACCGAAC",1,5.14,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N107L R136H",2
"lib1","SARS-CoV-2","GACTGACGACAGAGAA",7,213.62,9.25,-1.51,0.06,2.85,1.11,0,">1 nonsynonymous","S43E N120E Q168L T201V",4
"lib1","SARS-CoV-2","GACTGACTGGTAAACT",3,4.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94M",1
"lib1","SARS-CoV-2","GACTGAGAAAACTAAA",1,1.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88E",1
"lib1","SARS-CoV-2","GACTGAGAAGAATTGT",4,5.72,6.48,-4.28,1.11,1.5,1.27,0.07,">1 nonsynonymous","K128N V181F",2
"lib1","SARS-CoV-2","GACTGAGATAACATAC",3,111.42,10.42,-0.35,0.04,2.95,1.02,0,">1 nonsynonymous","T46Q G116L",2
"lib1","SARS-CoV-2","GACTGAGGTTATCATA",1,26.35,10.88,0.12,0.1,2.87,1.04,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","GACTGATAGGACTGCT",4,61.63,6.05,-4.71,0.92,1.5,1.17,0.02,">1 nonsynonymous","L38F D68M D98H N107S Y121R",5
"lib1","SARS-CoV-2","GACTGATCTAGTAGAT",5,91.49,10.1,-0.66,0.07,2.27,1.08,0,">1 nonsynonymous","T55K G83Y S139Y",3
"lib1","SARS-CoV-2","GACTGATGTGACCAAG",2,10.01,10.89,0.13,0.1,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGATGTTTAAAAA",4,93.21,10.27,-0.5,0.04,2.86,1.02,0,">1 nonsynonymous","S41P F47Y",2
"lib1","SARS-CoV-2","GACTGATTCAGTAAGG",3,143.49,10.77,0,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGATTCGAAATTA",4,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16D K56V F70T W106K",4
"lib1","SARS-CoV-2","GACTGCAACAAATTGT",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S Y93K F99N",3
"lib1","SARS-CoV-2","GACTGCACAAGACATA",8,156.13,10.68,-0.08,0.09,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGCCCCCATTATC",1,6.32,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","Y93C V103Y E141K S164C",4
"lib1","SARS-CoV-2","GACTGCCTACTGTATG",6,68.82,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G86V A105L",2
"lib1","SARS-CoV-2","GACTGCCTTTTCAGTG",9,23.02,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3M R27Q L95R K128G E141L G152Q",6
"lib1","SARS-CoV-2","GACTGCGGAACCTAAT",3,57.21,8.09,-2.67,0.16,2.43,1.09,0.01,">1 nonsynonymous","D98M Y159Q",2
"lib1","SARS-CoV-2","GACTGCGGAGTGGATT",3,22.62,8.3,-2.47,0.22,1.5,1.01,0.02,">1 nonsynonymous","V103L L122F I138S",3
"lib1","SARS-CoV-2","GACTGCGGGTACAATC",3,30.86,10.34,-0.43,0.12,2.45,1.06,0.01,">1 nonsynonymous","T15I P149F",2
"lib1","SARS-CoV-2","GACTGCGTCCACCTCC",6,43.6,9.99,-0.77,0.1,2.31,1.06,0,">1 nonsynonymous","T55Y R136E",2
"lib1","SARS-CoV-2","GACTGCGTCTATGAAT",3,99.5,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S69L Y91V Y119V E141G",4
"lib1","SARS-CoV-2","GACTGCTCGGATGGTT",2,9.3,9.22,-1.55,0.3,1.71,1.09,0.03,">1 nonsynonymous","F44L T55H G155Y",3
"lib1","SARS-CoV-2","GACTGCTTACAGGGTA",11,3.68,NA,NA,NA,NA,NA,NA,"stop","E10G I72*",2
"lib1","SARS-CoV-2","GACTGCTTATTGCGTT",6,2.21,NA,NA,NA,NA,NA,NA,"stop","I28L T55L P82L Y93H R136L F156*",6
"lib1","SARS-CoV-2","GACTGCTTTCGACCGA",1,30.21,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L57W N92V Y119I I142T P149V",5
"lib1","SARS-CoV-2","GACTGGAAGTAAAAAC",1,96.57,6,-4.76,0.86,1.5,1.11,0.01,">1 nonsynonymous","D98T G146W Y175L",3
"lib1","SARS-CoV-2","GACTGGATACCTCAAA",5,58.78,8.12,-2.65,0.17,2.1,1.13,0.01,">1 nonsynonymous","N109C G166P",2
"lib1","SARS-CoV-2","GACTGGATCGTTAAAA",7,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N C49P D59S D90L G116R",5
"lib1","SARS-CoV-2","GACTGGATGCTTGCGT",7,31.26,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9P A14T F62C I104K",4
"lib1","SARS-CoV-2","GACTGGATGTTACCTA",2,15.05,10.1,-0.66,0.12,2.04,1.08,0.01,">1 nonsynonymous","T3V A105M",2
"lib1","SARS-CoV-2","GACTGGCAACGCCCAA",2,15.81,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F12K F70R I88R L95V",4
"lib1","SARS-CoV-2","GACTGGCGAGTTCTAA",1,16.7,6,-4.76,2,2.01,1.1,0,">1 nonsynonymous","T3V K87N K128M V182L",4
"lib1","SARS-CoV-2","GACTGGGAGCGCTGGC",1,5.16,9.22,-1.54,0.34,1.88,1.07,0.07,">1 nonsynonymous","S19T P149I",2
"lib1","SARS-CoV-2","GACTGGGCAATGAATA",5,53.9,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C61M R127H L131G",3
"lib1","SARS-CoV-2","GACTGGTATCCATGAG",4,36.74,6.3,-4.46,0.73,1.5,1.11,0.04,">1 nonsynonymous","A81Y N107Y N151R",3
"lib1","SARS-CoV-2","GACTGGTTGAGTACCG",4,18.84,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","I2W I72R W106Y G116L Y178L",5
"lib1","SARS-CoV-2","GACTGGTTTGCGCTAT",8,316.01,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6F R27E Y35D K56E S113P F167T P197R",7
"lib1","SARS-CoV-2","GACTGTAACAATTAAT",2,20.95,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V37Q I72Y",2
"lib1","SARS-CoV-2","GACTGTAAGGGTAGCT",4,81.38,9.74,-1.02,0.13,2.24,1.07,0.01,">1 nonsynonymous","N4K C31F G83S",3
"lib1","SARS-CoV-2","GACTGTACAACTAGAG",5,55.21,10.11,-0.65,0.05,2.97,1,0,">1 nonsynonymous","I2D K87A D97Y S164T Y175F",5
"lib1","SARS-CoV-2","GACTGTACTTAAGCTA",4,55.42,10.75,-0.01,0.05,2.94,1.03,0,">1 nonsynonymous","D59K G196V",2
"lib1","SARS-CoV-2","GACTGTAGCGAACTTG",6,83.33,10.78,0.02,0.06,2.94,1.01,0,"1 nonsynonymous","G152A",1
"lib1","SARS-CoV-2","GACTGTATAAATGCGC",1,8.03,10.2,-0.56,0.1,2.8,1.03,0.01,"1 nonsynonymous","Y91I",1
"lib1","SARS-CoV-2","GACTGTATCAACGCAG",4,55.1,8.29,-2.48,0.16,1.84,1.11,0.01,"1 nonsynonymous","D112S",1
"lib1","SARS-CoV-2","GACTGTATCTATTTTG",3,20.3,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","D59F K94S F99V D112K N171S",5
"lib1","SARS-CoV-2","GACTGTATTAACTCCG",4,39.76,6,-4.76,2,3,1.16,0,">1 nonsynonymous","W23M D97N L122P I142Q C150N F160L",6
"lib1","SARS-CoV-2","GACTGTATTACGCTTC",5,104.58,10.28,-0.49,0.04,2.86,1.03,0,">1 nonsynonymous","I2G K48F",2
"lib1","SARS-CoV-2","GACTGTATTTTAAAAA",3,13.2,10.59,-0.17,0.1,2.91,1.05,0,">1 nonsynonymous","V32F F62N T201M",3
"lib1","SARS-CoV-2","GACTGTCAGCATTGAC",4,33.26,10.44,-0.33,0.05,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGTCCATTTTAAC",1,7.12,6.73,-4.04,0.31,1.5,1.1,0.02,">1 nonsynonymous","C6K V52I Y66H T85M",4
"lib1","SARS-CoV-2","GACTGTCCTAACATTT",7,60.37,6.05,-4.72,0.62,3,1.24,0.01,">1 nonsynonymous","L60P C102R",2
"lib1","SARS-CoV-2","GACTGTCTAAAAAATT",5,113.93,10.75,-0.01,0.06,2.92,1.05,0,">1 nonsynonymous","S113A T201L",2
"lib1","SARS-CoV-2","GACTGTCTTAGCACCT",1,81.65,9.72,-1.04,0.17,1.89,1.08,0.01,">1 nonsynonymous","S43A P82K",2
"lib1","SARS-CoV-2","GACTGTGACAGGATTT",2,36.18,6.15,-4.62,0.86,1.5,1.14,0.03,">1 nonsynonymous","L5P F12V I72D Q79R G86S",5
"lib1","SARS-CoV-2","GACTGTGATGTTTGTA",13,85.13,6.7,-4.06,0.24,1.5,1.11,0.01,">1 nonsynonymous","D97A R124A",2
"lib1","SARS-CoV-2","GACTGTGCCTTGGAGA",1,104.79,6.17,-4.6,0.59,1.5,1.17,0.01,"1 nonsynonymous","F167C",1
"lib1","SARS-CoV-2","GACTGTGGAGGGCTTA",1,6.92,10.48,-0.28,0.29,2.94,1,0.03,">1 nonsynonymous","N4C D97I V173M",3
"lib1","SARS-CoV-2","GACTGTGTCACTTACT",1,5.47,8.94,-1.82,0.29,2.14,1.14,0.03,">1 nonsynonymous","N4R G9M F44Y L122G I142N",5
"lib1","SARS-CoV-2","GACTGTGTCATTTGAA",4,54.17,9.82,-0.94,0.08,1.86,1.07,0,">1 nonsynonymous","L5V Q84H D90Y P149L",4
"lib1","SARS-CoV-2","GACTGTTAATAGGATC",6,117.68,10.74,-0.02,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTGTTACTTAAATC",3,34.87,10.77,0,0.05,2.85,1.11,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","GACTGTTCCCTCTAGT",3,83.83,10.76,0,0.06,2.91,1.03,0,"1 nonsynonymous","K199N",1
"lib1","SARS-CoV-2","GACTGTTCTTGGTGCT",1,6.73,10.59,-0.18,0.08,2.9,1.12,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","GACTGTTGAGCTACAC",2,6.06,10.68,-0.09,0.13,2.79,1.17,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GACTGTTGCATTAAGA",6,8.75,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3I F8G S41D D90P",4
"lib1","SARS-CoV-2","GACTGTTGCGACGACG",8,120.08,6,-4.76,1.42,1.5,1.16,0.01,">1 nonsynonymous","N118E C150L T201R",3
"lib1","SARS-CoV-2","GACTGTTTATGTTACG",7,54.02,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11S P96L R124A G146V",4
"lib1","SARS-CoV-2","GACTGTTTGAATCTTT",2,33.44,6.59,-4.18,0.47,1.5,1.08,0.03,">1 nonsynonymous","D34Y D97V N120S C158V",4
"lib1","SARS-CoV-2","GACTGTTTGCGCTTAG",1,11.06,10.69,-0.08,0.12,2.88,1.08,0,">1 nonsynonymous","V52C C61A T85K P149S",4
"lib1","SARS-CoV-2","GACTGTTTGGCTGGAT",5,74.51,10.16,-0.6,0.07,2.88,1.01,0,">1 nonsynonymous","S53L I72C G174S",3
"lib1","SARS-CoV-2","GACTTAAAAAGCAGTA",2,48.54,10.75,-0.02,0.05,2.93,1.03,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","GACTTAAACTTGGGAA",7,207.39,8.89,-1.88,0.08,2.7,1.09,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","GACTTAAAGCGAATAA",9,4.29,NA,NA,NA,NA,NA,NA,"stop","N1W I80* T85V D90K S113K G152R T201R",7
"lib1","SARS-CoV-2","GACTTAAAGGTTTGCA",13,67.49,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","Y50N V77A S113M E141G",4
"lib1","SARS-CoV-2","GACTTAAGCCTGAAAT",3,67.02,10.68,-0.08,0.05,2.91,1.05,0,">1 nonsynonymous","G9T T55S",2
"lib1","SARS-CoV-2","GACTTAAGTCCCCAAT",3,68.89,10.7,-0.07,0.07,2.83,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTTAAGTGCCACTA",6,68.03,9.41,-1.36,0.2,1.58,1.17,0.01,">1 nonsynonymous","A18T V181T",2
"lib1","SARS-CoV-2","GACTTAATACCCACCC",9,88.88,8.68,-2.08,0.26,1.5,1,0.03,">1 nonsynonymous","Y50F V77E",2
"lib1","SARS-CoV-2","GACTTAATTGACATTG",1,40.28,10.77,0.01,0.08,2.87,1.05,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","GACTTACAAAGAAAGG",2,13.21,10.15,-0.62,0.07,2.91,1.04,0,">1 nonsynonymous","F44L L111Y",2
"lib1","SARS-CoV-2","GACTTACAAAGCGTTA",5,94.35,9.82,-0.95,0.09,2.62,1.04,0,">1 nonsynonymous","K87C W106M L122V",3
"lib1","SARS-CoV-2","GACTTACAATCAAATG",5,67.02,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","D68E V103P N157I",3
"lib1","SARS-CoV-2","GACTTACAGTCTCATG",3,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G R179K T201I",3
"lib1","SARS-CoV-2","GACTTACATATTAGAA",5,0.91,NA,NA,NA,NA,NA,NA,"stop","K128I D137* Y159I",3
"lib1","SARS-CoV-2","GACTTACCAATGATCA",2,20.32,9.92,-0.85,0.12,2.29,1.01,0.01,">1 nonsynonymous","N4A F99M",2
"lib1","SARS-CoV-2","GACTTACCTAACTCCA",2,9.02,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","T3L I72W F99C Y119K",4
"lib1","SARS-CoV-2","GACTTACGAGTGTACC",10,89.91,6.09,-4.67,0.42,1.5,1.16,0.01,">1 nonsynonymous","G51F G86V",2
"lib1","SARS-CoV-2","GACTTACTACTGGAAC",6,74.26,10,-0.77,0.08,2.4,1,0,">1 nonsynonymous","K26L K87A T140G N151L Q163Y",5
"lib1","SARS-CoV-2","GACTTACTTCGTGCCA",6,117.39,6,-4.76,1.88,1.5,1.17,0.01,">1 nonsynonymous","Y39L L60T G101C T148P P161V",5
"lib1","SARS-CoV-2","GACTTAGCAGCGCCTG",7,251.49,9.77,-0.99,0.08,2.17,1.05,0,">1 nonsynonymous","P96M L122W",2
"lib1","SARS-CoV-2","GACTTAGCATACTAAT",6,15.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L A42W D90A",3
"lib1","SARS-CoV-2","GACTTAGCGTCAGCCA",5,492.11,9.77,-1,0.07,1.94,1.04,0,"1 nonsynonymous","C49M",1
"lib1","SARS-CoV-2","GACTTAGGACGCTTTC",7,161.02,6,-4.76,1.3,1.5,1.15,0.02,">1 nonsynonymous","L5Q V37D D59S A105T T148V Y178D",6
"lib1","SARS-CoV-2","GACTTAGTGACGTTAA",2,7.45,10.25,-0.51,0.13,2.99,1,0.01,"1 nonsynonymous","R73Q",1
"lib1","SARS-CoV-2","GACTTAGTGATTTTAT",7,133.8,10.72,-0.04,0.04,2.91,1.06,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GACTTATACCTCTACA",9,38.8,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L60V A81T K87A E141V N151I",5
"lib1","SARS-CoV-2","GACTTATATTTCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7V V71M E141N S147*",4
"lib1","SARS-CoV-2","GACTTATCCTTTACCC",1,43.81,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K56M K87S N92S I142K Y175G",5
"lib1","SARS-CoV-2","GACTTATGCCATCCAG",5,32.08,11,0.24,0.06,2.96,1,0,"1 nonsynonymous","V173K",1
"lib1","SARS-CoV-2","GACTTATGTTTCGTGG",3,64.5,9.7,-1.06,0.19,1.88,1.11,0.01,"1 nonsynonymous","I28E",1
"lib1","SARS-CoV-2","GACTTATTAAGTCTCG",1,43.78,10.22,-0.55,0.05,2.91,1,0,"1 nonsynonymous","F126V",1
"lib1","SARS-CoV-2","GACTTATTCCAACCGT",1,50.61,10.69,-0.07,0.03,2.94,1.03,0,">1 nonsynonymous","L122D T201M",2
"lib1","SARS-CoV-2","GACTTATTCTAGTAGG",12,186.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37I V52L K132I G172L G174W",5
"lib1","SARS-CoV-2","GACTTCAAAGAGATAC",4,67.71,6.58,-4.18,0.32,1.5,1.16,0.01,">1 nonsynonymous","I2L G51R C61L D68T L125M P177R P197W",7
"lib1","SARS-CoV-2","GACTTCAACCAGCACA",3,59.8,10.13,-0.64,0.05,2.91,1,0,">1 nonsynonymous","V37L V115C",2
"lib1","SARS-CoV-2","GACTTCAACGGTATCG",2,57.46,10.28,-0.48,0.07,2.83,1.06,0,">1 nonsynonymous","K48L P149Y Q163R",3
"lib1","SARS-CoV-2","GACTTCACGAAATTCT",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S P169Q",2
"lib1","SARS-CoV-2","GACTTCACGTAACTAA",2,75.88,10.47,-0.3,0.04,2.9,1.05,0,">1 nonsynonymous","D59T A105T",2
"lib1","SARS-CoV-2","GACTTCATGACATAGT",6,57.43,7.14,-3.63,0.36,1.5,1.13,0.03,">1 nonsynonymous","T15V D90V Q163N",3
"lib1","SARS-CoV-2","GACTTCATGCCCAAGC",2,12.46,10.14,-0.63,0.1,2.47,1.07,0.01,">1 nonsynonymous","N1T K56D Q84R",3
"lib1","SARS-CoV-2","GACTTCATGTCACATA",4,83.02,9.17,-1.6,0.09,2.79,1.1,0,">1 nonsynonymous","R16V S43G S129T T140I Y143W T201K",6
"lib1","SARS-CoV-2","GACTTCATTCTAGAAG",2,7.21,10.16,-0.6,0.17,2.7,1.12,0.01,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","GACTTCCAACCCACCG",1,24.75,10.04,-0.72,0.09,2.83,1.02,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","GACTTCCCAAAATGGA",6,70.51,10.76,-0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GACTTCCCAAGCGTAA",5,71.29,10.81,0.05,0.06,2.89,1.06,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GACTTCCTCAGCACAT",4,63.82,10.82,0.05,0.06,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GACTTCGAAAATTCAT",10,131.15,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V37L F47S A89C E141I G152F",5
"lib1","SARS-CoV-2","GACTTCGGGTACCTAT",4,46.12,10.52,-0.25,0.07,2.91,1,0,"1 nonsynonymous","E141C",1
"lib1","SARS-CoV-2","GACTTCTACCAATGTA",2,1.38,NA,NA,NA,NA,NA,NA,"stop","V20L G117K L162* T201Y",4
"lib1","SARS-CoV-2","GACTTCTACTATAAAT",6,42.72,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D34L S113L T201S",3
"lib1","SARS-CoV-2","GACTTGACATCTAGCT",3,60.86,10.73,-0.04,0.08,2.95,1.04,0,">1 nonsynonymous","T55H T63L",2
"lib1","SARS-CoV-2","GACTTGACCGGTTGCT",1,5.58,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R124Y N157L",2
"lib1","SARS-CoV-2","GACTTGACGGAGACAT",3,45.99,8.94,-1.83,0.09,2.58,1.12,0,">1 nonsynonymous","F62G Y143V",2
"lib1","SARS-CoV-2","GACTTGAGTGTTACGG",1,14.13,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","T85P F99Y F167L S200H",4
"lib1","SARS-CoV-2","GACTTGATACCGCTTG",4,49.21,10.61,-0.16,0.07,2.94,1.04,0,"1 nonsynonymous","G155T",1
"lib1","SARS-CoV-2","GACTTGCTATTCAATT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","A22R K132L V173*",3
"lib1","SARS-CoV-2","GACTTGCTTATCTCCG",5,133.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25S Y50W Y66P Y143S",4
"lib1","SARS-CoV-2","GACTTGTACCTATCGC",1,70.41,10.36,-0.41,0.09,2.75,1.06,0,">1 nonsynonymous","G83L C195W",2
"lib1","SARS-CoV-2","GACTTGTCAAGCAGAG",5,42.53,10.14,-0.63,0.11,2.59,1,0.01,">1 nonsynonymous","L57N P191R K198A",3
"lib1","SARS-CoV-2","GACTTGTCAATAGGGA",5,5.52,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N1P L57K S69K E135A",4
"lib1","SARS-CoV-2","GACTTGTTACTATGGG",1,5.57,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88R N151S Y175N F185L T201L",5
"lib1","SARS-CoV-2","GACTTGTTCGGCCGTA",2,1.15,NA,NA,NA,NA,NA,NA,"stop","L60Q N107D G117K G152S V173*",5
"lib1","SARS-CoV-2","GACTTGTTTACTTGTT",1,16.47,8.73,-2.04,0.18,2.29,1.11,0.01,">1 nonsynonymous","N64I D112E L187Q",3
"lib1","SARS-CoV-2","GACTTTAAAAACCTAA",2,31.3,10.06,-0.7,0.05,2.94,1.01,0,"1 nonsynonymous","F126H",1
"lib1","SARS-CoV-2","GACTTTAACAACGCTG",3,77.95,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10H L95E G174I",3
"lib1","SARS-CoV-2","GACTTTAACGGCACAG",2,32.99,9.85,-0.92,0.15,1.91,1.15,0.01,"1 nonsynonymous","L131A",1
"lib1","SARS-CoV-2","GACTTTAACTCGATAA",2,54.15,10.14,-0.63,0.03,2.8,1.06,0,">1 nonsynonymous","D90H F160C",2
"lib1","SARS-CoV-2","GACTTTAAGAGGCTGT",3,76.73,10.37,-0.4,0.05,2.89,1,0,">1 nonsynonymous","D98F L111K",2
"lib1","SARS-CoV-2","GACTTTACAATCGTGT",3,88.57,10.75,-0.01,0.08,2.88,1.06,0,">1 nonsynonymous","L60T S147P",2
"lib1","SARS-CoV-2","GACTTTACCTGTCGTG",13,87.63,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72P D90H K128S Q163D",4
"lib1","SARS-CoV-2","GACTTTACTAACTGTC",2,62.44,10.35,-0.41,0.06,2.92,1,0,">1 nonsynonymous","D59P S147D",2
"lib1","SARS-CoV-2","GACTTTAGGTTACTCG",1,74.38,8.46,-2.3,0.14,2.62,1.07,0.01,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","GACTTTATAAATTAAT",3,65.96,10.81,0.05,0.05,2.94,1.02,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","GACTTTATCCACACTT",10,66.32,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","D68E D90M A105V A145L N157S",5
"lib1","SARS-CoV-2","GACTTTATTTCATAAG",10,135.27,10.26,-0.51,0.03,2.95,1.01,0,">1 nonsynonymous","N4P N30T D98N",3
"lib1","SARS-CoV-2","GACTTTCTAATACATA",2,7.14,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P7K D59G D98T I104Q",4
"lib1","SARS-CoV-2","GACTTTCTACTTTCGA",1,8.71,7.63,-3.14,0.24,1.5,1.09,0.01,">1 nonsynonymous","G83C A105L S113N",3
"lib1","SARS-CoV-2","GACTTTCTAGACCCTA",6,13.23,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S36N S45L D98H D112H P133I E154G",6
"lib1","SARS-CoV-2","GACTTTCTGAAGTATG",2,88.22,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W23L D68W K87T C102L F160P P177D",6
"lib1","SARS-CoV-2","GACTTTCTGTAACGTG",1,32.1,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","R25T F47A I80W T140M",4
"lib1","SARS-CoV-2","GACTTTCTTTTGAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K K48V N58H D112G S139K Y175G",6
"lib1","SARS-CoV-2","GACTTTGCTAGAAATG",4,85.08,10.42,-0.34,0.04,2.87,1,0,">1 nonsynonymous","T15P F44R",2
"lib1","SARS-CoV-2","GACTTTGGATCAACCT",4,114.04,8.71,-2.06,0.11,2.8,1.03,0,">1 nonsynonymous","S41C N157T",2
"lib1","SARS-CoV-2","GACTTTGTATAAACCA",1,2.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60G",1
"lib1","SARS-CoV-2","GACTTTTCAGAACCCA",7,38.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R27N S113N F134H N157F",4
"lib1","SARS-CoV-2","GACTTTTCTCATGTAC",7,98.65,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","K56N Y93S W106T",3
"lib1","SARS-CoV-2","GACTTTTGAAACGTTG",1,1.25,NA,NA,NA,NA,NA,NA,"stop","S43R P177*",2
"lib1","SARS-CoV-2","GAGAAAAAAGCTATAC",2,47.56,10.28,-0.48,0.06,2.78,1.07,0,">1 nonsynonymous","Y91I T140R",2
"lib1","SARS-CoV-2","GAGAAAAAAGTAATCA",2,6.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68P S129L Y143W",3
"lib1","SARS-CoV-2","GAGAAAAAATAACTCA",5,67.84,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","C61N K87L Y93F D98V Y121D",5
"lib1","SARS-CoV-2","GAGAAAAAATAAGCAT",2,30.81,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","R25D A81T Q176R",3
"lib1","SARS-CoV-2","GAGAAAAAATCTGCCA",4,74.39,10.37,-0.39,0.05,2.91,1.03,0,">1 nonsynonymous","L38Y P197G",2
"lib1","SARS-CoV-2","GAGAAAAAATTCGCAT",2,19.45,6.73,-4.03,0.36,1.5,1.1,0.02,">1 nonsynonymous","C6L S41G V115L F160G F185P",5
"lib1","SARS-CoV-2","GAGAAAAACACCCCTA",9,130.95,10.73,-0.04,0.05,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAAAACGTGCACA",7,1.78,NA,NA,NA,NA,NA,NA,"stop","G74R P82S C195S T201*",4
"lib1","SARS-CoV-2","GAGAAAAAGAGGATCA",3,27.17,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","I2Q S36P S45K C102P Q168S",5
"lib1","SARS-CoV-2","GAGAAAAATAAGCAGT",7,51.97,7.7,-3.06,0.32,1.5,1.03,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","GAGAAAAATTAATTTA",2,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F99N Y143M",3
"lib1","SARS-CoV-2","GAGAAAACAGGCGACA",5,46.63,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F17C A105H K114G",3
"lib1","SARS-CoV-2","GAGAAAACGACAAAAT",6,34.75,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","A18L T85S E141C G152C",4
"lib1","SARS-CoV-2","GAGAAAAGACGAAGTA",3,85.22,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V20E V37D G101S G117D E141S C158F P169A Y178H",8
"lib1","SARS-CoV-2","GAGAAAAGGAAAATAC",3,50.07,10.54,-0.22,0.06,2.86,1.06,0,">1 nonsynonymous","D97S I138R",2
"lib1","SARS-CoV-2","GAGAAAAGTCCAAAAC",7,126.68,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25G A89D P133A",3
"lib1","SARS-CoV-2","GAGAAAATAGGCGCTT",3,73.57,10.06,-0.71,0.06,2.91,1,0,">1 nonsynonymous","G116A S129L",2
"lib1","SARS-CoV-2","GAGAAAATAGTTGCAA",4,25.48,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","L57S K128A P161Y",3
"lib1","SARS-CoV-2","GAGAAAATATCCAGTT",7,70.37,10.82,0.06,0.08,2.9,1.06,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","GAGAAAATCCATGTTA",5,38.48,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","A81P Y143R",2
"lib1","SARS-CoV-2","GAGAAAATCCGGACTG",18,102,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T55N A67R K132N E141V T170F",5
"lib1","SARS-CoV-2","GAGAAACAGTCGTACC",1,26.72,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K56P I88Y K114V F156L",4
"lib1","SARS-CoV-2","GAGAAACATCAACATG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14K W23L Y119*",3
"lib1","SARS-CoV-2","GAGAAACATCTACATC",6,57.13,10.7,-0.06,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAACATTTCCCAC",12,1.18,NA,NA,NA,NA,NA,NA,"stop","D34S G146*",2
"lib1","SARS-CoV-2","GAGAAACCAATGAAAA",1,1.76,NA,NA,NA,NA,NA,NA,"stop","G9* Y91L",2
"lib1","SARS-CoV-2","GAGAAACCACGATATA",6,139.84,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N107Q I138V Y175T V194I",4
"lib1","SARS-CoV-2","GAGAAACCGTAGGTAA",3,47.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y P82V T100A F156S",4
"lib1","SARS-CoV-2","GAGAAACGCAGCCATA",2,34.14,10.1,-0.66,0.09,2.88,1.02,0,">1 nonsynonymous","Y66Q L122R P133S",3
"lib1","SARS-CoV-2","GAGAAACTAACCAGTA",2,2.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71G",1
"lib1","SARS-CoV-2","GAGAAACTACACTACT",8,140.04,10.78,0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAACTCGAGTTAT",2,61.16,10.2,-0.56,0.07,2.56,1.04,0,"1 nonsynonymous","F47K",1
"lib1","SARS-CoV-2","GAGAAACTCGCATTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R D98S E154M",3
"lib1","SARS-CoV-2","GAGAAACTGGAAGTAC",2,27.15,10.79,0.02,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAACTTGCGAGCT",3,5.54,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A42Q K94M Y178R",3
"lib1","SARS-CoV-2","GAGAAAGAATTTCTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33P F44V I142Y C158F F167T Q176* A192W",7
"lib1","SARS-CoV-2","GAGAAAGCAAATCGAT",8,1.54,NA,NA,NA,NA,NA,NA,"stop","C31T Y39N D90* T100D",4
"lib1","SARS-CoV-2","GAGAAAGCATCTAGTG",2,11.51,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","S45R Q176W",2
"lib1","SARS-CoV-2","GAGAAAGCCAACTACC",1,19.1,6.64,-4.12,0.63,1.5,1.03,0.06,">1 nonsynonymous","Y91L F99D D137R T148P F156M",5
"lib1","SARS-CoV-2","GAGAAAGGAAGCTTGG",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E F99V H189E",3
"lib1","SARS-CoV-2","GAGAAAGGAATAGATT",5,12.52,NA,NA,NA,NA,NA,0.32,"1 nonsynonymous","N92M",1
"lib1","SARS-CoV-2","GAGAAAGGCGAACCAA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S I28D K56A I88L",4
"lib1","SARS-CoV-2","GAGAAAGTACACGTAC",5,30.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26C L60Q A81P G86T C158L P169I",6
"lib1","SARS-CoV-2","GAGAAAGTAGAATACC",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S A89Q S113W",3
"lib1","SARS-CoV-2","GAGAAAGTTAGCGATA",1,52.4,9.01,-1.75,0.12,2.54,1.18,0.01,">1 nonsynonymous","V103I N109D",2
"lib1","SARS-CoV-2","GAGAAATACGAATAAC",1,14.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V Y66V V103S R124M Y165R",5
"lib1","SARS-CoV-2","GAGAAATAGTAAATAA",1,12.54,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12W T100F N107V P133N T170W",5
"lib1","SARS-CoV-2","GAGAAATCAAATATGC",6,80.15,10.01,-0.75,0.09,2.39,1.04,0,">1 nonsynonymous","N13K Q144M L187V",3
"lib1","SARS-CoV-2","GAGAAATCATACGAAA",11,197.78,10.81,0.04,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAATCGTAAACCT",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65E Y91Q",2
"lib1","SARS-CoV-2","GAGAAATCTATAACGC",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99H Q176Y",2
"lib1","SARS-CoV-2","GAGAAATGAGAGCAAG",1,94.61,8.44,-2.33,0.15,2.88,1.08,0.01,">1 nonsynonymous","V37Y G166E",2
"lib1","SARS-CoV-2","GAGAAATGATAAAGTG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4* G86N N107L S129G",4
"lib1","SARS-CoV-2","GAGAAATGCAATTCCA",7,63.21,6.84,-3.92,0.21,1.5,1.13,0.01,">1 nonsynonymous","D112H S164Y",2
"lib1","SARS-CoV-2","GAGAAATGCATTCACA",1,15.57,10.59,-0.17,0.1,2.79,1.14,0,"1 nonsynonymous","A18Q",1
"lib1","SARS-CoV-2","GAGAAATGGAAATACA",1,20.93,10.83,0.07,0.07,2.88,1.03,0,">1 nonsynonymous","N1L S200R",2
"lib1","SARS-CoV-2","GAGAAATGGCTACACG",5,14.55,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C49S T63G G83L",3
"lib1","SARS-CoV-2","GAGAAATGGTGATCTT",5,26.91,7.56,-3.2,0.18,1.89,1.21,0.01,">1 nonsynonymous","A14P A145L",2
"lib1","SARS-CoV-2","GAGAAATGTTAACGAG",5,67.85,9.91,-0.85,0.12,1.95,1.07,0,">1 nonsynonymous","V11G P197G",2
"lib1","SARS-CoV-2","GAGAAATTACGCATAC",2,13.32,10.27,-0.49,0.19,2.79,1,0.01,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","GAGAAATTATTTACAG",1,37.15,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L5K F12S S29T N92F P149S R179E",6
"lib1","SARS-CoV-2","GAGAAATTCAATAAGC",3,33.14,9.15,-1.61,0.1,2.92,1.05,0,">1 nonsynonymous","A22K G117V",2
"lib1","SARS-CoV-2","GAGAAATTCTTACTGA",3,13.88,9.1,-1.66,0.18,2.26,1.02,0.01,">1 nonsynonymous","T63M Y143M",2
"lib1","SARS-CoV-2","GAGAAATTGTACACTA",3,33.19,7.43,-3.33,0.28,1.5,1.15,0.02,">1 nonsynonymous","I2T K94L V153W",3
"lib1","SARS-CoV-2","GAGAAATTTAAACTCA",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W V71Y L131Q T201L",4
"lib1","SARS-CoV-2","GAGAAATTTATATCCC",3,61.29,9.48,-1.28,0.19,1.86,1.13,0.01,">1 nonsynonymous","K56V Y91G",2
"lib1","SARS-CoV-2","GAGAAATTTGATAGTG",7,208.28,10.46,-0.3,0.03,2.89,1.05,0,">1 nonsynonymous","Q168R P169H",2
"lib1","SARS-CoV-2","GAGAACAAAAAGTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* Y93C S129M F167Y",4
"lib1","SARS-CoV-2","GAGAACAAAAGGCCAC",6,102.06,9.65,-1.11,0.1,2.59,1.01,0,">1 nonsynonymous","L5V P133Q E154L",3
"lib1","SARS-CoV-2","GAGAACAAGTCAGTGA",15,405.04,10.57,-0.19,0.04,2.89,1.05,0,">1 nonsynonymous","T55C T201N",2
"lib1","SARS-CoV-2","GAGAACAATAATGTTG",1,10.77,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N4L V37S K87Y S139W P161C",5
"lib1","SARS-CoV-2","GAGAACACAATAGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Y C61S T85P A105P D137* G166K F185C",7
"lib1","SARS-CoV-2","GAGAACACAGTCGATC",1,6.94,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G9L A22Q I80Y D112A",4
"lib1","SARS-CoV-2","GAGAACACGACACCCA",5,163.55,10.78,0.02,0.07,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGAACACTCGTCTTG",3,15.27,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","A14Y L60F I88S Y123A",4
"lib1","SARS-CoV-2","GAGAACAGATTTCACG",1,6.73,8.25,-2.51,0.27,1.63,1.13,0.03,"1 nonsynonymous","F126P",1
"lib1","SARS-CoV-2","GAGAACATCTAATGGG",4,72.01,10.3,-0.47,0.05,2.86,1.02,0,">1 nonsynonymous","E141L V153A S184A",3
"lib1","SARS-CoV-2","GAGAACATGGGCTATT",11,166.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8W R25Y L38Q",3
"lib1","SARS-CoV-2","GAGAACCAAATATAAA",2,13.65,8.02,-2.74,0.12,1.93,1.24,0,"1 nonsynonymous","F126P",1
"lib1","SARS-CoV-2","GAGAACCCCATCCCTA",14,167.42,10.79,0.02,0.05,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGAACCCTAGGAGTT",3,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K N13F T46V I104Q K128L",5
"lib1","SARS-CoV-2","GAGAACCGACCGTACC",3,97.8,10.82,0.06,0.08,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGAACCGCACTATCA",4,11.29,7.4,-3.36,0.35,1.5,1.26,0.04,">1 nonsynonymous","A81K V182C",2
"lib1","SARS-CoV-2","GAGAACCGGACTAAAA",2,5.23,6,-4.76,2,3,1.11,0,">1 nonsynonymous","P96G F167S Y175S",3
"lib1","SARS-CoV-2","GAGAACGCTTATATAA",2,13.18,9.58,-1.19,0.18,2.52,1.04,0.01,">1 nonsynonymous","C6T T63P",2
"lib1","SARS-CoV-2","GAGAACGTAGTTTCGC",1,8.46,10.63,-0.14,0.1,2.86,1.09,0,">1 nonsynonymous","N40K D59S N130I",3
"lib1","SARS-CoV-2","GAGAACGTCTCGCAAC",2,18.09,9.46,-1.31,0.32,1.5,1.07,0.04,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","GAGAACGTGTACCTTC",3,79.4,10.7,-0.07,0.05,2.92,1.02,0,">1 nonsynonymous","P7S C61R P149N",3
"lib1","SARS-CoV-2","GAGAACGTTAAACTCT",8,87.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55L T63N G83I C158G",4
"lib1","SARS-CoV-2","GAGAACTAATAGGTAA",1,30.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89V C158N",2
"lib1","SARS-CoV-2","GAGAACTAATCTAAAA",2,51.53,10.21,-0.56,0.06,2.58,1,0,">1 nonsynonymous","Q84N F160V",2
"lib1","SARS-CoV-2","GAGAACTATGAACTGC",3,34.8,6.13,-4.63,0.8,1.5,1.18,0.02,">1 nonsynonymous","I88Q Y119S",2
"lib1","SARS-CoV-2","GAGAACTCACTCTAAA",4,56.12,8.74,-2.02,0.11,2.9,1.09,0.01,"1 nonsynonymous","G166Y",1
"lib1","SARS-CoV-2","GAGAACTGAATTGACG",4,14.6,9.39,-1.37,0.2,1.8,1.11,0.03,">1 nonsynonymous","G9T G86S",2
"lib1","SARS-CoV-2","GAGAACTGACATCATG",2,2.84,NA,NA,NA,NA,NA,NA,"stop","F12* L162*",2
"lib1","SARS-CoV-2","GAGAACTGAGCCCGCG",1,3.09,NA,NA,NA,NA,NA,NA,"stop","L57V Q84K T100L Y119*",4
"lib1","SARS-CoV-2","GAGAACTGCAAATAAT",1,20.71,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A22K K48W C61P Y91P I138G",5
"lib1","SARS-CoV-2","GAGAACTTCAAGTAAA",5,150.4,10.39,-0.37,0.04,2.89,1.05,0,">1 nonsynonymous","G83M I142F",2
"lib1","SARS-CoV-2","GAGAACTTGCCAAAAA",1,16.62,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","L5S Y66V C102Q K128I P197T",5
"lib1","SARS-CoV-2","GAGAACTTTCGGTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37M F99* C158S S200V",4
"lib1","SARS-CoV-2","GAGAAGAATTTTCGCA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","Y50T G83V G152T N171*",4
"lib1","SARS-CoV-2","GAGAAGACACGCAATA",2,45.07,6.4,-4.36,0.79,1.5,1.31,0.04,">1 nonsynonymous","S69R V181M",2
"lib1","SARS-CoV-2","GAGAAGACCTAAGCCG",2,63.81,10.65,-0.11,0.09,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAGACGAATTAAT",5,66.55,6.17,-4.59,0.79,1.5,1.17,0.02,">1 nonsynonymous","L95V C102T S139C Q168D",4
"lib1","SARS-CoV-2","GAGAAGACGCTAACCT",4,1.75,NA,NA,NA,NA,NA,NA,"stop","A81F Y91R F126* Q144K",4
"lib1","SARS-CoV-2","GAGAAGAGTTCGCATG",1,35.61,9.86,-0.9,0.14,2.07,1.06,0.01,">1 nonsynonymous","C61A S139W",2
"lib1","SARS-CoV-2","GAGAAGAGTTTCAATA",4,50.67,10.81,0.04,0.11,2.85,1.06,0,">1 nonsynonymous","L5S A18S Y123K S129T",4
"lib1","SARS-CoV-2","GAGAAGATAAATACAA",3,16.67,9.36,-1.4,0.18,1.77,1.25,0.02,"1 nonsynonymous","Y50C",1
"lib1","SARS-CoV-2","GAGAAGATAACACTTT",5,27.87,8.4,-2.37,0.38,1.5,1,0.06,">1 nonsynonymous","L57K Y91R N171W",3
"lib1","SARS-CoV-2","GAGAAGATTGCTAAAG",8,105.09,10.76,0,0.07,2.93,1.04,0,">1 nonsynonymous","K26M K132R",2
"lib1","SARS-CoV-2","GAGAAGATTGTGATAT",1,70.04,6.58,-4.18,0.38,1.5,1.14,0.02,">1 nonsynonymous","T3S W106V Y178R",3
"lib1","SARS-CoV-2","GAGAAGATTGTTAACA",3,52.61,10.04,-0.73,0.06,2.81,1.04,0,">1 nonsynonymous","T140M S164I",2
"lib1","SARS-CoV-2","GAGAAGATTTCTTAAT",7,28.46,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A42L A105V C158N T201N",4
"lib1","SARS-CoV-2","GAGAAGCAAAAGAGGT",6,125.88,9.98,-0.78,0.12,2.25,1.04,0.01,">1 nonsynonymous","L60I F99Y S200N",3
"lib1","SARS-CoV-2","GAGAAGCACATGGCTA",5,60.41,10.77,0,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAGCATCTATGCA",4,82.61,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G9S Y66V F167G",3
"lib1","SARS-CoV-2","GAGAAGCATTAACACA",7,93.52,9.68,-1.08,0.13,1.91,1.1,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","GAGAAGCCACCTCCCC",1,38.26,10.53,-0.23,0.07,2.93,1,0,">1 nonsynonymous","V11I D59L",2
"lib1","SARS-CoV-2","GAGAAGCGAGTGGGGA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","T3S E10* V37D L60N",4
"lib1","SARS-CoV-2","GAGAAGCGTTCTTACT",1,59.06,6.15,-4.62,1.07,1.5,1.2,0.04,">1 nonsynonymous","F8L L38V G83S K94P L122K F134R",6
"lib1","SARS-CoV-2","GAGAAGCTGATCTTCA",3,10.37,NA,NA,NA,NA,NA,NA,"stop","S129D D137* F160L",3
"lib1","SARS-CoV-2","GAGAAGGACTAAAGCA",7,70.96,6,-4.76,1.48,1.5,1.17,0.01,">1 nonsynonymous","A14Y W23G T63S",3
"lib1","SARS-CoV-2","GAGAAGGGTCCACAAG",1,2.73,NA,NA,NA,NA,NA,NA,"stop","L38* Q84H A105F",3
"lib1","SARS-CoV-2","GAGAAGTAGGACGATT",2,41.91,6.13,-4.63,0.9,1.57,1.2,0.02,">1 nonsynonymous","S45L N107D P149F T201N",4
"lib1","SARS-CoV-2","GAGAAGTGAATAGTCT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","A42R Q79* T100N",3
"lib1","SARS-CoV-2","GAGAAGTTAAAAATAA",4,17.69,10.16,-0.61,0.11,2.88,1.02,0.01,">1 nonsynonymous","S41K T100S",2
"lib1","SARS-CoV-2","GAGAAGTTACACAGAT",8,120.93,6,-4.76,1.45,1.5,1.19,0.01,">1 nonsynonymous","N4I F44R G117V L131W C150Y",5
"lib1","SARS-CoV-2","GAGAAGTTAGATTGAC",4,20.59,10.64,-0.12,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAAGTTTGACGGTG",11,66.31,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F70W P82L F99L V180M",4
"lib1","SARS-CoV-2","GAGAATAAAATTTGAA",2,45.46,10.43,-0.33,0.12,2.8,1.06,0.01,">1 nonsynonymous","P96S E141N",2
"lib1","SARS-CoV-2","GAGAATAAACAACACG",2,22.67,8.87,-1.9,0.22,1.5,1.07,0.02,">1 nonsynonymous","C49I T140L",2
"lib1","SARS-CoV-2","GAGAATAAAGCGCCAT",1,8.6,9.05,-1.72,0.24,1.5,1.14,0.04,">1 nonsynonymous","E10T D59L D98L",3
"lib1","SARS-CoV-2","GAGAATAAATCGCCTA",4,1.59,NA,NA,NA,NA,NA,NA,"stop","Y50L C61G V77F I88* F156V N171H T201V",7
"lib1","SARS-CoV-2","GAGAATAACAGTACAA",7,127,10.25,-0.52,0.03,2.92,1.03,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","GAGAATAACATTGTTT",10,92.69,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10I L60K L95T C150D",4
"lib1","SARS-CoV-2","GAGAATAACCGAAAGG",5,32.1,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","L60N A81R K94S E135R T201L",5
"lib1","SARS-CoV-2","GAGAATAATGCCGCGA",5,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101N Y123S P169T",3
"lib1","SARS-CoV-2","GAGAATAATGCTAAGT",2,44.16,10.01,-0.75,0.1,2.78,1,0,">1 nonsynonymous","W106V P197A",2
"lib1","SARS-CoV-2","GAGAATACAAAAATCG",3,10.21,8.34,-2.42,0.42,1.5,1.2,0.08,">1 nonsynonymous","A42L K56Y G117N N130D T140L",5
"lib1","SARS-CoV-2","GAGAATACAATATACT",1,5.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R136T V173I Y178P",3
"lib1","SARS-CoV-2","GAGAATACATAACAAC",7,182,6,-4.76,1.55,1.5,1.18,0.01,">1 nonsynonymous","S113I G174L S184N",3
"lib1","SARS-CoV-2","GAGAATAGAAAATCAA",2,64.98,10.71,-0.05,0.04,2.93,1.05,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","GAGAATAGCACAGTTA",2,38.5,10.01,-0.76,0.12,2.13,1,0.01,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","GAGAATAGGTGTTATA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37N E135L E141*",3
"lib1","SARS-CoV-2","GAGAATAGTATTATAA",1,62.06,9.92,-0.85,0.11,1.84,1.09,0,">1 nonsynonymous","I28S Y39C K56A",3
"lib1","SARS-CoV-2","GAGAATAGTCTACACG",5,39.78,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G51Q Y91D F99H G155P P177H",5
"lib1","SARS-CoV-2","GAGAATATACAATCGG",4,38.04,10.6,-0.16,0.06,2.87,1.08,0,"1 nonsynonymous","K26L",1
"lib1","SARS-CoV-2","GAGAATATCCTATCTT",2,3.35,NA,NA,NA,NA,NA,NA,"stop","P54* G152P F160S",3
"lib1","SARS-CoV-2","GAGAATATGAGCTTCC",6,84.38,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14Y D68Q D97H Y119V",4
"lib1","SARS-CoV-2","GAGAATATGCTAGTAC",3,44.88,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T55H Q163P Q176L",3
"lib1","SARS-CoV-2","GAGAATATTCCTCGAG",6,17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13G F99C",2
"lib1","SARS-CoV-2","GAGAATCCAGCCTTTG",2,6.58,7.18,-3.58,0.42,2.56,1.13,0,">1 nonsynonymous","A42D A89D D98N E141F",4
"lib1","SARS-CoV-2","GAGAATCCCGAACACA",3,52.53,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14V Y39N C49L P161L",4
"lib1","SARS-CoV-2","GAGAATCCTATATACA",2,26.75,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2Q Y93T F160L Y165S",4
"lib1","SARS-CoV-2","GAGAATCGGTTATGAG",1,0.99,NA,NA,NA,NA,NA,NA,"stop","R16E A33* F134N G166D",4
"lib1","SARS-CoV-2","GAGAATCTAATAAAAT",5,14.06,6.07,-4.7,0.89,3,1.27,0.03,">1 nonsynonymous","W106V S113L K128M",3
"lib1","SARS-CoV-2","GAGAATGAAACAATTA",2,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GAGAATGAAAGAAACC",7,16.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1L G9H A14H D137W",4
"lib1","SARS-CoV-2","GAGAATGAAGGGCAAT",5,33.58,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V11S K87R K94L Q144L",4
"lib1","SARS-CoV-2","GAGAATGAGGATTCAG",8,41.47,10.29,-0.47,0.08,2.79,1,0,">1 nonsynonymous","S41Y C61S G83N Y121F K128H P149R",6
"lib1","SARS-CoV-2","GAGAATGCACTCACAG",2,15.05,6.17,-4.6,1.2,1.5,1.19,0.04,">1 nonsynonymous","F44P L95Y Y123K",3
"lib1","SARS-CoV-2","GAGAATGTATAAGTGG",2,44.9,10.81,0.04,0.09,2.92,1.05,0,"1 nonsynonymous","K26I",1
"lib1","SARS-CoV-2","GAGAATTAATGGTACA",3,0.52,NA,NA,NA,NA,NA,NA,"stop","C49G F62*",2
"lib1","SARS-CoV-2","GAGAATTACAATTCGG",10,104.53,6,-4.76,1.66,1.5,1.27,0.02,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","GAGAATTAGAACAATT",11,150.12,10.81,0.04,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAATTATAGATTAT",8,96.8,9.83,-0.94,0.12,2.49,1.08,0,">1 nonsynonymous","F44V K114S P149T S184Y",4
"lib1","SARS-CoV-2","GAGAATTATTTAATAA",6,53.6,10.75,-0.02,0.03,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAATTCAAATAAAA",7,2.37,NA,NA,NA,NA,NA,NA,"stop","S36* C61Y P133T",3
"lib1","SARS-CoV-2","GAGAATTCGACCATAG",7,86.88,9.3,-1.46,0.2,1.58,1.14,0.02,">1 nonsynonymous","Y35W A105P",2
"lib1","SARS-CoV-2","GAGAATTGTCACTCAA",3,23.05,6,-4.76,1.13,1.5,1.12,0.02,">1 nonsynonymous","P82N D90T S108Y",3
"lib1","SARS-CoV-2","GAGAATTGTTTAACGT",10,35.84,8.55,-2.21,0.14,1.67,1.18,0.01,">1 nonsynonymous","R127G S139R K198C",3
"lib1","SARS-CoV-2","GAGAATTTACAACCCC",2,19.83,9.11,-1.66,0.09,2.96,1.04,0,">1 nonsynonymous","F44W N157Q T201D",3
"lib1","SARS-CoV-2","GAGAATTTATATTAAA",1,34.46,9.98,-0.78,0.12,2.31,1.03,0.01,">1 nonsynonymous","S36F Y178C",2
"lib1","SARS-CoV-2","GAGAATTTCATAGAAT",2,22.85,7.05,-3.71,0.24,1.5,1.04,0.01,">1 nonsynonymous","R127V R136N",2
"lib1","SARS-CoV-2","GAGAATTTCCGAAGTA",9,590.54,9.64,-1.12,0.04,2.86,1.05,0,">1 nonsynonymous","K87R Q176H",2
"lib1","SARS-CoV-2","GAGAATTTTCAGCATG",3,65.03,10.8,0.03,0.06,2.95,1.03,0,">1 nonsynonymous","T55E G152A",2
"lib1","SARS-CoV-2","GAGACAAAAGACTAAG",5,40.63,10.77,0,0.06,2.92,1.03,0,"1 nonsynonymous","F160Y",1
"lib1","SARS-CoV-2","GAGACAAAATACAGTC",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V N107T E135W",3
"lib1","SARS-CoV-2","GAGACAAACAGGCCCT",1,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D34E",2
"lib1","SARS-CoV-2","GAGACAAACTGGCACC",1,5.77,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C61L L95P D112I P149K",4
"lib1","SARS-CoV-2","GAGACAAATTTCGAAA",5,93.59,10.63,-0.13,0.05,2.9,1.06,0,">1 nonsynonymous","V37W N64A G83H T100S",4
"lib1","SARS-CoV-2","GAGACAACGATTTACA",2,8.1,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G83E N92R",2
"lib1","SARS-CoV-2","GAGACAAGAGCCTAGG",3,24.9,6.98,-3.79,0.49,1.5,1.23,0.04,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","GAGACAAGTAGGATTC",2,71.68,10.85,0.08,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGACAATACGTGCAG",2,14.31,10.09,-0.67,0.19,2.54,1.08,0.01,"1 nonsynonymous","E76N",1
"lib1","SARS-CoV-2","GAGACAATAGCCATAA",1,34.68,8.73,-2.03,0.4,1.5,1,0.08,">1 nonsynonymous","D34K K87T N171S V181F",4
"lib1","SARS-CoV-2","GAGACAATAGTAGGGT",7,60.02,6.01,-4.75,1.02,1.5,1.19,0.02,">1 nonsynonymous","F17S N40T T100P",3
"lib1","SARS-CoV-2","GAGACAATTACATCAT",1,47.72,10.51,-0.25,0.07,3,1,0,">1 nonsynonymous","I2R V37I K87W",3
"lib1","SARS-CoV-2","GAGACAATTACTTCTG",6,0.31,NA,NA,NA,NA,NA,NA,"stop","N1I F8V Y21* P82L A105L V115L Q176F",7
"lib1","SARS-CoV-2","GAGACAATTATGAATA",1,24.63,9.2,-1.56,0.06,2.93,1.06,0,"1 nonsynonymous","G166W",1
"lib1","SARS-CoV-2","GAGACACAAGGAGTAC",1,56.6,9.26,-1.51,0.13,1.57,1.21,0.01,">1 nonsynonymous","Q84W D90Y",2
"lib1","SARS-CoV-2","GAGACACATAAAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T63* D98L P149L",3
"lib1","SARS-CoV-2","GAGACACATCAATAAG",7,0.99,NA,NA,NA,NA,NA,NA,"stop","K56* K128P E186S",3
"lib1","SARS-CoV-2","GAGACACCGTTTCTAC",10,59.22,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F134P T170F",2
"lib1","SARS-CoV-2","GAGACACGAATCAACC",3,36.33,10.71,-0.05,0.07,2.93,1.08,0,">1 nonsynonymous","D59Y K199D",2
"lib1","SARS-CoV-2","GAGACACGACTAAACT",4,29.11,10.69,-0.07,0.09,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGACACGATTGTAAG",2,28.03,8.02,-2.74,0.25,1.5,1.03,0.02,">1 nonsynonymous","L60K R127L",2
"lib1","SARS-CoV-2","GAGACACGGTATTTTC",1,45.1,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y39T D97E R127S C150E",4
"lib1","SARS-CoV-2","GAGACACGTATAAAGG",6,0.27,NA,NA,NA,NA,NA,NA,"stop","W106R P133* G174W",3
"lib1","SARS-CoV-2","GAGACACTAATCGACG",5,17.88,6,-4.76,2,2.85,1.06,0,">1 nonsynonymous","T46D C61V L95S N120T K132L",5
"lib1","SARS-CoV-2","GAGACACTTATTGCCG",2,48.5,7.35,-3.41,0.48,1.5,1.13,0.07,">1 nonsynonymous","N58H P161D",2
"lib1","SARS-CoV-2","GAGACACTTTCACCCA",2,28.67,10.16,-0.61,0.06,2.95,1,0,">1 nonsynonymous","D59H Y119R",2
"lib1","SARS-CoV-2","GAGACAGAATATTAGG",1,47.68,9.2,-1.56,0.09,2.71,1.15,0,">1 nonsynonymous","G9K P149S F156C",3
"lib1","SARS-CoV-2","GAGACAGACACTCGGA",5,27.76,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7V F44S D68L P149W C158G",5
"lib1","SARS-CoV-2","GAGACAGACCTGATCC",1,6.08,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G101T A105M E141K S147W G174R",5
"lib1","SARS-CoV-2","GAGACAGACCTTGGAA",2,45.16,9.78,-0.98,0.12,2,1.01,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","GAGACAGATCAACCAA",1,17.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R L60Q V71Q K94W N107L",5
"lib1","SARS-CoV-2","GAGACAGGAATGCATG",1,9.68,7.78,-2.98,0.19,2.36,1,0.01,">1 nonsynonymous","K94A T100H S113T",3
"lib1","SARS-CoV-2","GAGACAGGTAGCCCCA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","T55S P149*",2
"lib1","SARS-CoV-2","GAGACAGTAAACAGAA",1,35.41,10.36,-0.41,0.06,2.9,1,0,">1 nonsynonymous","K87S P197R",2
"lib1","SARS-CoV-2","GAGACAGTATTTTGCG",8,52.45,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V11C S36K D112Y",3
"lib1","SARS-CoV-2","GAGACAGTGTTTTCTA",2,6.86,10.7,-0.06,0.18,2.68,1.01,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GAGACATAAAAAAACA",12,7.17,NA,NA,NA,NA,NA,NA,"stop","A22* G86R",2
"lib1","SARS-CoV-2","GAGACATCATATGATT",3,152.73,10.23,-0.53,0.04,2.87,1.01,0,">1 nonsynonymous","T85M A145T",2
"lib1","SARS-CoV-2","GAGACATCGATTAAAA",1,9.11,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C49F G116W S147T G152I",4
"lib1","SARS-CoV-2","GAGACATGCGATAAAA",2,11.65,10.24,-0.52,0.14,2.84,1,0.01,">1 nonsynonymous","A33S K114V A145G",3
"lib1","SARS-CoV-2","GAGACATGTATATGTG",2,178.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y93W Y119R",2
"lib1","SARS-CoV-2","GAGACATTTATCTCGG",3,15.61,9.05,-1.71,0.33,2.24,1.21,0.03,"synonymous","",0
"lib1","SARS-CoV-2","GAGACCAAGGCCCTTG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S G83M E141L V153I Q168R",5
"lib1","SARS-CoV-2","GAGACCACCACCTCTA",6,80.71,7.79,-2.98,0.33,1.5,1.02,0.03,">1 nonsynonymous","G9F N30M G83H A105I",4
"lib1","SARS-CoV-2","GAGACCACCATAAACA",3,5.77,7.38,-3.39,0.15,1.88,1,0,">1 nonsynonymous","C102F L122W P161N",3
"lib1","SARS-CoV-2","GAGACCACTGGGCAAC",3,0.72,NA,NA,NA,NA,NA,NA,"stop","G9V A33I G83Y S129*",4
"lib1","SARS-CoV-2","GAGACCAGAAATCAGT",1,29.36,10.84,0.07,0.08,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGACCATAGTTAATG",3,12.16,9.33,-1.43,0.32,1.5,1.07,0.04,">1 nonsynonymous","L60S A89R",2
"lib1","SARS-CoV-2","GAGACCCACCCGCAAT",1,22.35,8.55,-2.21,0.18,1.5,1.09,0.02,">1 nonsynonymous","C49V T63M",2
"lib1","SARS-CoV-2","GAGACCCACTCAAATC",7,119.97,9.55,-1.21,0.09,2.04,1.07,0,">1 nonsynonymous","S29A Y35P D59G N110Y G116L",5
"lib1","SARS-CoV-2","GAGACCCATATGCCTG",1,7.39,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","K56L N130L C150E",3
"lib1","SARS-CoV-2","GAGACCCATCTGTAGA",4,14.25,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","S45M Y91D E141S F160L P197Q",5
"lib1","SARS-CoV-2","GAGACCCCATAAGAAT",10,178.41,8.64,-2.13,0.1,2.81,1.09,0,">1 nonsynonymous","F156M T170P",2
"lib1","SARS-CoV-2","GAGACCCCCAGCATAG",1,24.44,9.94,-0.83,0.16,2.35,1.04,0.01,">1 nonsynonymous","S41P F44V S139R L188I",4
"lib1","SARS-CoV-2","GAGACCCGAATTGTTG",5,76.53,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L5T V37I I104V G172F",4
"lib1","SARS-CoV-2","GAGACCCTAAGCCATA",2,36.96,9.29,-1.47,0.17,1.75,1.06,0.01,">1 nonsynonymous","F62W P96I V115M",3
"lib1","SARS-CoV-2","GAGACCGATTGCTCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6K R27S G117* F134N",4
"lib1","SARS-CoV-2","GAGACCGTCCCCACCC",5,1.43,NA,NA,NA,NA,NA,NA,"stop","K48L S139*",2
"lib1","SARS-CoV-2","GAGACCTGCTTAACCT",3,3.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","GAGACGAAAATACCGA",1,10.03,9.96,-0.81,0.2,2.63,1.03,0.01,">1 nonsynonymous","I2F D34K N58P N110L",4
"lib1","SARS-CoV-2","GAGACGAATGTTAGGT",2,140.63,10.15,-0.62,0.07,2.62,1.03,0,">1 nonsynonymous","Y35P D90S",2
"lib1","SARS-CoV-2","GAGACGACAGCATAGG",5,9.44,8.12,-2.64,0.21,1.68,1.18,0.01,">1 nonsynonymous","F47A Q144Y V173I",3
"lib1","SARS-CoV-2","GAGACGACCACTAAAA",8,115.67,9.97,-0.79,0.07,2.84,1.08,0,"1 nonsynonymous","N118H",1
"lib1","SARS-CoV-2","GAGACGACGTCGCGAT",2,20.44,6.79,-3.98,0.32,1.82,1.19,0.01,"1 nonsynonymous","Y159R",1
"lib1","SARS-CoV-2","GAGACGAGCTACTACT",10,29.98,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","A33S T63D Y91V C102R",4
"lib1","SARS-CoV-2","GAGACGAGGCTCTTGA",4,105.1,8.98,-1.79,0.2,2.05,1.13,0.02,">1 nonsynonymous","L111M Y165V",2
"lib1","SARS-CoV-2","GAGACGAGTTTTGCGC",3,17.24,6.47,-4.29,0.53,1.5,1.21,0.02,">1 nonsynonymous","V37S G86Y F99R N118G",4
"lib1","SARS-CoV-2","GAGACGATTTAACAGT",4,37.88,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","I2L G51L C158S",3
"lib1","SARS-CoV-2","GAGACGCACCGTTATA",3,6.97,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","K48E G74W L122P",3
"lib1","SARS-CoV-2","GAGACGCCTTTGCATG",2,46.68,10.79,0.03,0.06,2.96,1.02,0,">1 nonsynonymous","R16D Y39V L122T",3
"lib1","SARS-CoV-2","GAGACGCGAAATGTTC",2,17.59,9.77,-0.99,0.22,2.16,1,0.02,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","GAGACGCGAGGCATTC",1,59.8,8.07,-2.69,0.2,1.76,1.1,0.01,">1 nonsynonymous","A14T T85R Q176R",3
"lib1","SARS-CoV-2","GAGACGCGGTACCAAC",1,32.42,6.27,-4.49,0.26,1.5,1.09,0.01,">1 nonsynonymous","W106L Y175E",2
"lib1","SARS-CoV-2","GAGACGCTAAACCCGG",14,144.14,8.05,-2.71,0.2,1.64,1.13,0.01,">1 nonsynonymous","I2S Y50H N118P",3
"lib1","SARS-CoV-2","GAGACGCTCCTATTAC",8,48.4,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T63L I104N A190F",3
"lib1","SARS-CoV-2","GAGACGCTCTTCCTAT",5,55.89,10.16,-0.6,0.11,2.21,1.02,0,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","GAGACGCTTTTGGTAT",1,33.43,6.34,-4.42,0.81,1.5,1.1,0.04,">1 nonsynonymous","S129D Y143T N157Y T201M",4
"lib1","SARS-CoV-2","GAGACGGATTTCTTGT",5,31.71,7.3,-3.46,0.27,1.5,1.16,0.02,">1 nonsynonymous","C102L R136L",2
"lib1","SARS-CoV-2","GAGACGGTAGTCATTT",3,83.12,10.78,0.01,0.08,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGACGTCTACCGAGA",2,66.54,10.74,-0.02,0.06,2.94,1.03,0,">1 nonsynonymous","N4Q V173D",2
"lib1","SARS-CoV-2","GAGACGTGACCATCAC",1,47.18,9.97,-0.79,0.13,2.37,1.1,0.01,"1 nonsynonymous","S19M",1
"lib1","SARS-CoV-2","GAGACGTGATCCATTG",1,39.2,10.83,0.06,0.09,2.88,1.06,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","GAGACGTGATTGAGTA",5,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y S41H T63F N107S",4
"lib1","SARS-CoV-2","GAGACGTGGCTAACAG",1,18.88,6.02,-4.75,0.69,1.5,1.12,0.02,">1 nonsynonymous","Y39M Y50C A89I",3
"lib1","SARS-CoV-2","GAGACTAAATAAATAA",5,0.63,NA,NA,NA,NA,NA,NA,"stop","V37N P54* G146W P191T",4
"lib1","SARS-CoV-2","GAGACTAAATGGCCAG",4,49.78,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35I I88N D98V V103D S147Y C158L",6
"lib1","SARS-CoV-2","GAGACTAAGTGTCTGA",2,44.38,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5I T55A C61G I104W C150N T201H",6
"lib1","SARS-CoV-2","GAGACTATCAGGGAAC",1,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32T S69C V103L L122T T140P",5
"lib1","SARS-CoV-2","GAGACTATCCGCGTGG",7,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T Y91H W106K",3
"lib1","SARS-CoV-2","GAGACTATGTGAAAGC",1,16.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5K N30R S41R P54Y A145V G146W T148N",7
"lib1","SARS-CoV-2","GAGACTCAAACTCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* N107T P161L",3
"lib1","SARS-CoV-2","GAGACTCAGTATGAAC",3,50.51,10.7,-0.06,0.1,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGACTCATGTCAACA",3,16.92,10.42,-0.34,0.15,2.94,1.07,0.01,"1 nonsynonymous","G83R",1
"lib1","SARS-CoV-2","GAGACTCCCTGTTTTA",1,7.55,7.61,-3.16,0.27,1.61,1.07,0.03,">1 nonsynonymous","F12I D68M L188Q",3
"lib1","SARS-CoV-2","GAGACTCCTTTACTTC",4,9.71,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V20K S41T Y91G V182N",4
"lib1","SARS-CoV-2","GAGACTCGACTCTTTA",2,14.22,7.68,-3.09,0.21,2.56,1.15,0.02,">1 nonsynonymous","L60T D90S N107P G174E",4
"lib1","SARS-CoV-2","GAGACTCTTAGTAACG",6,74.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9S F44K G86V D112Y I142V",5
"lib1","SARS-CoV-2","GAGACTGAAAAATTAA",4,37.84,9.98,-0.79,0.11,2.25,1.02,0.01,">1 nonsynonymous","N4Y P133N",2
"lib1","SARS-CoV-2","GAGACTGAATTCAAAA",5,125.77,10.15,-0.62,0.06,2.67,1.02,0,">1 nonsynonymous","N4R L57G",2
"lib1","SARS-CoV-2","GAGACTGACAAAACTA",3,31.16,10.98,0.22,0.09,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGACTGACTTCAAAG",3,23.87,6.05,-4.71,1.22,1.5,1.32,0.04,">1 nonsynonymous","C61N K114T R124S",3
"lib1","SARS-CoV-2","GAGACTGAGGAAATCT",4,51.85,6,-4.76,1.51,1.5,1.21,0.03,">1 nonsynonymous","R25A A89V F99S P161H V173M",5
"lib1","SARS-CoV-2","GAGACTGCGCTAGATT",1,18.66,9.23,-1.54,0.16,2.47,1.07,0.01,">1 nonsynonymous","T15P I142S V153F",3
"lib1","SARS-CoV-2","GAGACTGGTAAAGAGA",5,61.02,9.83,-0.93,0.09,2.04,1.04,0,"1 nonsynonymous","L131N",1
"lib1","SARS-CoV-2","GAGACTGGTTAACTCA",6,37.87,6.47,-4.3,0.38,1.5,1.2,0.01,">1 nonsynonymous","W106Y Y143E A190L",3
"lib1","SARS-CoV-2","GAGACTTAATACCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50K S184*",2
"lib1","SARS-CoV-2","GAGACTTAATTTTTAA",1,39.29,6.5,-4.26,0.45,1.5,1.16,0.02,">1 nonsynonymous","T63S D112G",2
"lib1","SARS-CoV-2","GAGACTTCGCTTTACC",4,30.52,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","Y91E W106N Y143E H189N",4
"lib1","SARS-CoV-2","GAGACTTGAGGTCTTA",2,26.61,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","K48P I80L W106M Y123P L183Y T201Q",6
"lib1","SARS-CoV-2","GAGACTTGCCGTTCAT",17,85.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89W P96T N120R",3
"lib1","SARS-CoV-2","GAGACTTGCTTAAAAA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","P96F D112E C150G T170*",4
"lib1","SARS-CoV-2","GAGACTTTATACAATG",5,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N S45E I104H",3
"lib1","SARS-CoV-2","GAGACTTTTACTCAAA",3,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R A14P D75W N120G",4
"lib1","SARS-CoV-2","GAGACTTTTCACCCCT",4,228.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N64K K87L S129I G172I P177A",5
"lib1","SARS-CoV-2","GAGAGAAAAAATAAAA",5,80.08,8.15,-2.61,0.37,1.5,1,0.05,">1 nonsynonymous","L38A I80V S139H",3
"lib1","SARS-CoV-2","GAGAGAAAAGTATCGG",2,34.97,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T55F L122S V182Q",3
"lib1","SARS-CoV-2","GAGAGAAAAGTTATAT",11,106.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64Q T85A K114G R124S G174P",5
"lib1","SARS-CoV-2","GAGAGAACAAAGCCAC",1,0.52,NA,NA,NA,NA,NA,NA,"stop","D34F Y121L S129* Y178K",4
"lib1","SARS-CoV-2","GAGAGAACAATGGGAT",2,24.3,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C6K N58D N171Y Y178D",4
"lib1","SARS-CoV-2","GAGAGAACTGGTTAAC",1,16.83,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","F8T F17N K56F Y121G",4
"lib1","SARS-CoV-2","GAGAGAAGACCGCCTA",6,43.75,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L5G T15C Y39K P54H Y91T",5
"lib1","SARS-CoV-2","GAGAGAAGATATTAGA",6,127.7,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L5H P177M",2
"lib1","SARS-CoV-2","GAGAGAAGCAACAACA",5,42.54,10.72,-0.04,0.05,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAGAAGCTATCGCA",7,134.43,9.6,-1.16,0.05,2.75,1.06,0,">1 nonsynonymous","Q84R G146N",2
"lib1","SARS-CoV-2","GAGAGAAGCTGAATTT",2,19.26,6.99,-3.77,0.24,1.74,1.1,0.03,">1 nonsynonymous","T46V L122P V153S T170Q",4
"lib1","SARS-CoV-2","GAGAGAATACCTTATT",4,122.76,9.66,-1.1,0.05,2.8,1.06,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","GAGAGAATTAATCAAA",3,32.48,7.04,-3.72,0.15,1.5,1.11,0.01,">1 nonsynonymous","A18R K94H R136M E154G",4
"lib1","SARS-CoV-2","GAGAGAATTATCTATT",14,197.73,10.78,0.01,0.04,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAGAATTCTGTAGT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","L5K R16* V173E",3
"lib1","SARS-CoV-2","GAGAGACCTAATTATG",10,5.96,NA,NA,NA,NA,NA,NA,"stop","Y39W L57*",2
"lib1","SARS-CoV-2","GAGAGACGACAATAGT",25,297.02,8.81,-1.95,0.12,1.71,1.13,0.01,">1 nonsynonymous","G9E Y39A R127L",3
"lib1","SARS-CoV-2","GAGAGACTAACGCGGA",9,36.92,8.1,-2.66,0.36,1.5,1,0.06,">1 nonsynonymous","A14Y C61M F99E N151R",4
"lib1","SARS-CoV-2","GAGAGACTAATAACCG",4,69.63,7.74,-3.02,0.11,1.75,1.11,0,">1 nonsynonymous","R73M F167L",2
"lib1","SARS-CoV-2","GAGAGAGATATGACTT",3,33.14,8.12,-2.64,0.27,1.5,1.18,0.03,">1 nonsynonymous","Y21C G152Y",2
"lib1","SARS-CoV-2","GAGAGAGGCCGCCCGA",5,105.72,9.45,-1.31,0.07,2.66,1.11,0,">1 nonsynonymous","N58T N118Y",2
"lib1","SARS-CoV-2","GAGAGAGGTCTGACAC",4,23.77,9.25,-1.51,0.21,2.1,1.15,0.02,">1 nonsynonymous","K128V Y165M",2
"lib1","SARS-CoV-2","GAGAGAGTATTAACAA",2,22.9,7.11,-3.66,0.48,1.5,1,0.06,">1 nonsynonymous","D90Q L95D Q168F",3
"lib1","SARS-CoV-2","GAGAGAGTGTAAATAA",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S D98G Q168V",3
"lib1","SARS-CoV-2","GAGAGAGTTACGCCAA",2,180.51,10.78,0.02,0.05,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGAGATAGGCCACAG",3,34.4,6,-4.76,2,1.5,1.32,0.03,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","GAGAGATCCCATTATT",6,41.99,10.76,0,0.03,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGAGATGATCAGAAT",1,40.37,10.08,-0.69,0.06,2.99,1,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","GAGAGATGTGCCGCGA",12,0.83,NA,NA,NA,NA,NA,NA,"stop","C6* V11S L111R A145F",4
"lib1","SARS-CoV-2","GAGAGCAAAATACCTT",4,49.7,10.78,0.01,0.1,2.94,1.02,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GAGAGCAAACATATAT",3,22.21,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V37K G86S V103N N118S",4
"lib1","SARS-CoV-2","GAGAGCAAATCCCAGT",10,175.6,9.89,-0.88,0.08,2.64,1.11,0,">1 nonsynonymous","V115H G152I",2
"lib1","SARS-CoV-2","GAGAGCACCAACCTTA",2,5.72,6.15,-4.61,0.71,3,1.2,0.01,">1 nonsynonymous","N13K F99A T201S",3
"lib1","SARS-CoV-2","GAGAGCCGTGAATGAT",2,41.31,10.74,-0.02,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAGCCTGAAATCTA",6,3.6,NA,NA,NA,NA,NA,NA,"stop","N24* G51Q K94G E141Q Q168R",5
"lib1","SARS-CoV-2","GAGAGCGATGTTCGTT",3,19.57,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","V103L F126S P149G",3
"lib1","SARS-CoV-2","GAGAGCTCTCATGCAC",5,80.45,10.13,-0.64,0.06,2.7,1.01,0,">1 nonsynonymous","G9F F62K L131I",3
"lib1","SARS-CoV-2","GAGAGGCATATACATA",2,46.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14F N58Y I88A K94D Y175T Y178L",6
"lib1","SARS-CoV-2","GAGAGGCATATTGGTT",1,10.66,6,-4.76,2,1.5,1.18,0.04,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","GAGAGGCCAATAATAA",4,92.96,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G86R P177Y",2
"lib1","SARS-CoV-2","GAGAGGCGGATCATAT",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P Q163S V181P",3
"lib1","SARS-CoV-2","GAGAGGCTCAACAAGG",2,31.58,10.71,-0.05,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGAGGCTTCCGACAG",5,118.89,10.8,0.04,0.05,2.94,1.03,0,"1 nonsynonymous","H189R",1
"lib1","SARS-CoV-2","GAGAGGGAACAGTTCA",12,2.21,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","GAGAGGGACATGTGGA",4,49.08,10.28,-0.48,0.07,2.73,1.11,0,">1 nonsynonymous","N40I L188K",2
"lib1","SARS-CoV-2","GAGAGGTTAAGGGACC",10,68.31,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14T R25T S43N D112G F156P T170Y S184N",7
"lib1","SARS-CoV-2","GAGAGGTTGATAGGTT",6,71.54,10.63,-0.13,0.06,2.77,1,0,">1 nonsynonymous","R27W P54V",2
"lib1","SARS-CoV-2","GAGAGTAAAAACCCTG",1,72.5,6.19,-4.58,0.48,1.77,1.16,0.01,">1 nonsynonymous","G74V L131I Q176Y K199S",4
"lib1","SARS-CoV-2","GAGAGTAACATTAGCA",2,41.12,10.6,-0.16,0.05,2.87,1.1,0,">1 nonsynonymous","S53D D90H",2
"lib1","SARS-CoV-2","GAGAGTAACTTAATCT",5,90.42,7.33,-3.43,0.16,1.5,1.08,0.01,"1 nonsynonymous","C150G",1
"lib1","SARS-CoV-2","GAGAGTAAGCCAAAAC",1,11.14,10.12,-0.64,0.17,1.92,1.02,0.01,">1 nonsynonymous","Y50L W106S",2
"lib1","SARS-CoV-2","GAGAGTAATACCTATA",5,97.69,10.68,-0.09,0.06,2.93,1.01,0,"1 nonsynonymous","T140F",1
"lib1","SARS-CoV-2","GAGAGTAATGGCACAG",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19N K87W T140I",3
"lib1","SARS-CoV-2","GAGAGTACATCATACA",2,15.68,11.08,0.31,0.1,2.87,1.01,0,">1 nonsynonymous","Q163M P197Q",2
"lib1","SARS-CoV-2","GAGAGTACCATAGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50N G86E V103P Y178*",4
"lib1","SARS-CoV-2","GAGAGTACGAAGAATG",11,66.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N107F R127L",2
"lib1","SARS-CoV-2","GAGAGTAGAAAGCGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R V173P",2
"lib1","SARS-CoV-2","GAGAGTAGGCAGAAGG",4,25.68,8.33,-2.43,0.24,1.5,1.11,0.03,">1 nonsynonymous","D59K N64T D112L G155S",4
"lib1","SARS-CoV-2","GAGAGTAGTAGTCTCC",3,42.5,8.63,-2.14,0.14,1.99,1.2,0.01,">1 nonsynonymous","I88M T170A",2
"lib1","SARS-CoV-2","GAGAGTATCTGCGAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25M",1
"lib1","SARS-CoV-2","GAGAGTATGTCCCCCC",9,112.77,6.25,-4.52,0.35,1.5,1.1,0.01,">1 nonsynonymous","S36Q N92Y L122M",3
"lib1","SARS-CoV-2","GAGAGTCCCTTATTCT",2,31.66,10.49,-0.27,0.07,2.71,1.13,0,">1 nonsynonymous","L60Q A145S F160S L188H",4
"lib1","SARS-CoV-2","GAGAGTCTCTGTACCA",1,32.6,10.05,-0.72,0.11,2.31,1,0.01,">1 nonsynonymous","V37L T55V N107G K128A",4
"lib1","SARS-CoV-2","GAGAGTGCACCAAATT",2,28.04,8.51,-2.26,0.14,2.35,1.18,0.01,">1 nonsynonymous","C6N F126C",2
"lib1","SARS-CoV-2","GAGAGTGGTTGAGGTA",1,2.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","GAGAGTTAAACGCCAA",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F C102S Q163L G166V",4
"lib1","SARS-CoV-2","GAGAGTTAAATGCACA",5,106.13,10.76,0,0.06,2.93,1.02,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","GAGAGTTACCTTAGCC",6,29.83,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G101L N120S N130A P149M T201M",5
"lib1","SARS-CoV-2","GAGAGTTCACGAACTA",5,1.67,NA,NA,NA,NA,NA,NA,"stop","A18W R27A G51* L57T L131*",5
"lib1","SARS-CoV-2","GAGAGTTGGCTTCCAC",2,9.75,9.08,-1.68,0.41,1.5,1,0.06,"1 nonsynonymous","R25W",1
"lib1","SARS-CoV-2","GAGAGTTTATATCAGA",2,14.66,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","W23D Q168L",2
"lib1","SARS-CoV-2","GAGAGTTTCTGCCGAG",4,1.54,NA,NA,NA,NA,NA,NA,"stop","F70* L122F P133M Y143G T148I",5
"lib1","SARS-CoV-2","GAGATAAAAAAGAGCA",2,24.52,10.95,0.19,0.1,2.9,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGATAAAAATTCTTC",7,170.9,8.59,-2.17,0.09,2.94,1.05,0,"1 nonsynonymous","Q168K",1
"lib1","SARS-CoV-2","GAGATAAAATAATTAG",1,39.07,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","K94W S129F Q168P",3
"lib1","SARS-CoV-2","GAGATAAAGAATTTAG",2,13.41,7.11,-3.65,0.35,1.5,1.06,0.03,">1 nonsynonymous","A81G A89N K114T V153D",4
"lib1","SARS-CoV-2","GAGATAACACTTAGAG",3,56.79,6.23,-4.54,0.58,1.5,1.07,0.02,">1 nonsynonymous","G83P Y121I C158A",3
"lib1","SARS-CoV-2","GAGATAACGAAGATCC",3,18.68,10.86,0.09,0.1,2.88,1.03,0,"1 nonsynonymous","K128E",1
"lib1","SARS-CoV-2","GAGATAACTCGATACA",4,54.5,10.39,-0.38,0.08,2.95,1,0,">1 nonsynonymous","F126L V194L",2
"lib1","SARS-CoV-2","GAGATAAGAGACAAAC",7,94.61,10.12,-0.64,0.04,2.88,1.07,0,">1 nonsynonymous","P149C G174M",2
"lib1","SARS-CoV-2","GAGATAAGCCGGTTTA",4,48.2,8.98,-1.78,0.13,2.52,1.19,0.01,">1 nonsynonymous","C61L A89V G166A",3
"lib1","SARS-CoV-2","GAGATAAGTCACTTTA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R I138H",2
"lib1","SARS-CoV-2","GAGATAATACGTGGTA",1,26.79,6,-4.76,0.95,1.5,1.08,0.01,">1 nonsynonymous","V20K D34C I72M N92V F99Y",5
"lib1","SARS-CoV-2","GAGATAATGACGGGGT",3,2.9,NA,NA,NA,NA,NA,NA,"stop","K94Q N120*",2
"lib1","SARS-CoV-2","GAGATAATGCATGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50N C61A F99P A105F T140*",5
"lib1","SARS-CoV-2","GAGATAATTTACGGGC",9,53.33,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D34T F62R N107A S139E",4
"lib1","SARS-CoV-2","GAGATACAAAGTCATT",8,28.5,6,-4.76,0.59,3,1.17,0,">1 nonsynonymous","D90Y E141Y C150L",3
"lib1","SARS-CoV-2","GAGATACAACCCGGCC",4,27.31,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D68Q E141M",2
"lib1","SARS-CoV-2","GAGATACAAGATATAC",1,74.95,10.04,-0.73,0.09,2.37,1,0,">1 nonsynonymous","T3L V52T T85D N130A",4
"lib1","SARS-CoV-2","GAGATACAGCTTGTCG",4,111.21,10.78,0.01,0.04,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGATACCAAAAGCTA",1,35.99,10.86,0.09,0.08,2.9,1.01,0,"1 nonsynonymous","V153D",1
"lib1","SARS-CoV-2","GAGATACCAACCGAAA",6,87.16,10.74,-0.02,0.05,2.97,1.01,0,"1 nonsynonymous","V115H",1
"lib1","SARS-CoV-2","GAGATACGAATAAAGT",3,0.97,NA,NA,NA,NA,NA,NA,"stop","F8V S45P K56P R127*",4
"lib1","SARS-CoV-2","GAGATACTCCTTACAC",1,50.35,9.56,-1.21,0.15,2.07,1.06,0.01,">1 nonsynonymous","K94M K114C S200G",3
"lib1","SARS-CoV-2","GAGATACTGTCTACAT",5,67.71,10.31,-0.46,0.06,2.89,1.02,0,">1 nonsynonymous","K48R L60I P96S",3
"lib1","SARS-CoV-2","GAGATACTTAGAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81L T85L Y121L F160Y",4
"lib1","SARS-CoV-2","GAGATAGATCTAAATT",2,35.99,10.45,-0.31,0.07,2.91,1,0,">1 nonsynonymous","D98P K132M",2
"lib1","SARS-CoV-2","GAGATAGCGTTTAGAG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","L5V W23V T46L G174E Y178S S200*",6
"lib1","SARS-CoV-2","GAGATAGGAAATATAT",4,51.95,10.22,-0.54,0.04,2.9,1.04,0,">1 nonsynonymous","K87C K132F",2
"lib1","SARS-CoV-2","GAGATAGGGGGGCTTG",1,14.11,9.74,-1.03,0.19,1.96,1.1,0.01,"1 nonsynonymous","R25K",1
"lib1","SARS-CoV-2","GAGATAGGTAAAAGTA",4,19.99,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C150S E186L",2
"lib1","SARS-CoV-2","GAGATAGTTAATATAG",1,8.45,10.29,-0.47,0.24,2.61,1.1,0.02,">1 nonsynonymous","A14G P197R",2
"lib1","SARS-CoV-2","GAGATATAAGTTTCAG",1,24.42,10.07,-0.7,0.04,2.97,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","GAGATATACATACAAA",1,27.98,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C102S A105M",2
"lib1","SARS-CoV-2","GAGATATACGTGATTA",9,109.08,8.47,-2.3,0.12,2.19,1.14,0.01,">1 nonsynonymous","A89T I142F A145E",3
"lib1","SARS-CoV-2","GAGATATAGTTCAATA",4,57.49,10.46,-0.31,0.07,2.89,1.07,0,">1 nonsynonymous","Y39E Y66N",2
"lib1","SARS-CoV-2","GAGATATATGGGATGT",3,19.96,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","C61L D68L R136S V181L",4
"lib1","SARS-CoV-2","GAGATATCTAACTTCG",2,47.99,9.94,-0.83,0.08,2.67,1.05,0,">1 nonsynonymous","F44S N58R L122I",3
"lib1","SARS-CoV-2","GAGATATTACCCACGC",9,25.45,8.68,-2.08,0.14,1.74,1.16,0.01,">1 nonsynonymous","T3M S129F S139W T201A",4
"lib1","SARS-CoV-2","GAGATCAATCAACACT",3,9.64,NA,NA,NA,NA,NA,NA,"stop","T3N S29A S41* Y50T G83L N171* H189D S200P",8
"lib1","SARS-CoV-2","GAGATCAGCAGTATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* L95H L122M",3
"lib1","SARS-CoV-2","GAGATCCAAAGACAAA",4,0.55,NA,NA,NA,NA,NA,NA,"stop","S69* Q84M R136A T201P",4
"lib1","SARS-CoV-2","GAGATCCACATTAACT",2,61.26,9.52,-1.24,0.06,2.87,1.12,0,">1 nonsynonymous","D59T Y119S",2
"lib1","SARS-CoV-2","GAGATCGTACTTCTAT",5,3.73,NA,NA,NA,NA,NA,NA,"stop","L5R F12M N30* Y119F P149R G166Y",6
"lib1","SARS-CoV-2","GAGATCGTCCGGCTGG",2,38.89,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","G9D L38M Y178P",3
"lib1","SARS-CoV-2","GAGATCTACAGAGAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","F44N T63D Y93* N171I",4
"lib1","SARS-CoV-2","GAGATCTATATAATGG",8,107.28,10.83,0.07,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGATCTATTCTTATA",3,12.5,10.81,0.05,0.18,2.86,1.09,0.02,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","GAGATCTGAACTTGGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S G86I",2
"lib1","SARS-CoV-2","GAGATCTTAGTAGTAC",12,0.54,NA,NA,NA,NA,NA,NA,"stop","I2A E10* S45V R78L Y165D V180A",6
"lib1","SARS-CoV-2","GAGATCTTATATAAAA",3,40,6.37,-4.4,0.6,1.5,1.1,0.03,">1 nonsynonymous","L38C L60A G86Q G146Y N157Y P197E T201K",7
"lib1","SARS-CoV-2","GAGATCTTCATATTAA",2,11.58,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A81R F99T N107Y N120I",4
"lib1","SARS-CoV-2","GAGATGAATAATCAGC",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R D90I N130A",3
"lib1","SARS-CoV-2","GAGATGACACGACTGG",1,7.79,8.24,-2.53,0.08,2.88,1.04,0,">1 nonsynonymous","A42V S53H Y143A",3
"lib1","SARS-CoV-2","GAGATGACTAATGAAC",6,104.86,8.58,-2.19,0.09,2.87,1.08,0,"1 nonsynonymous","Y159Q",1
"lib1","SARS-CoV-2","GAGATGATCCAACCAC",1,14.24,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L111Q F167V",2
"lib1","SARS-CoV-2","GAGATGCAAAACTTAA",8,123.74,8.56,-2.21,0.13,2.2,1.16,0.01,">1 nonsynonymous","W106K N157D",2
"lib1","SARS-CoV-2","GAGATGCACCGTAACT",2,17.26,9.76,-1.01,0.14,2.46,1.07,0.01,">1 nonsynonymous","C6M V32K S45A",3
"lib1","SARS-CoV-2","GAGATGCATCACCAAG",7,343.27,9.45,-1.32,0.08,2.66,1.07,0,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","GAGATGCCATGAACAT",2,28.41,6,-4.76,2,3,1.16,0,">1 nonsynonymous","E10M R127L R136Q C158L",4
"lib1","SARS-CoV-2","GAGATGCCATTATGCA",4,24.43,10.9,0.14,0.07,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGATGCCTCTAGTCA",1,9.24,NA,NA,NA,NA,NA,NA,"stop","P7* Y35R S41L S139F Y159S",5
"lib1","SARS-CoV-2","GAGATGCGGCGAAGTA",9,96.66,10.71,-0.05,0.06,2.91,1.05,0,"1 nonsynonymous","D59Q",1
"lib1","SARS-CoV-2","GAGATGCTAAAGGGAT",6,6.93,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","GAGATGCTTAAAGCAG",1,32.04,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D68R Y91V A105V C158L",4
"lib1","SARS-CoV-2","GAGATGCTTTCAATTA",1,13.45,10.72,-0.05,0.07,2.89,1.03,0,">1 nonsynonymous","T55K I138P Q168F",3
"lib1","SARS-CoV-2","GAGATGGACGTAGAAT",10,73.43,7.4,-3.36,0.21,1.5,1.13,0.01,">1 nonsynonymous","A105G Y121R",2
"lib1","SARS-CoV-2","GAGATGGATTGTGATT",3,62.31,10.75,-0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGATGGCCTAGGACC",5,0.05,NA,NA,NA,NA,NA,NA,"stop","F8R C61I P96K V173*",4
"lib1","SARS-CoV-2","GAGATGGTGAACAAAG",2,28.16,7.04,-3.72,0.52,1.5,1.17,0.05,">1 nonsynonymous","I2L W23K L95S Q144L T148S Q176L",6
"lib1","SARS-CoV-2","GAGATGGTTACATCAT",6,84.19,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56F I88S N151L G172N P177T",5
"lib1","SARS-CoV-2","GAGATGTAAAGAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38* Y143D",2
"lib1","SARS-CoV-2","GAGATGTAAAGATGAC",1,20.8,10.5,-0.26,0.12,2.88,1.1,0.01,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","GAGATGTAATGTAGAA",18,106.49,6.12,-4.64,1.25,1.5,1.25,0.05,">1 nonsynonymous","V20M V37G S45M T55I D68S L111Y Y143F",7
"lib1","SARS-CoV-2","GAGATGTACCTCTATA",3,1.37,NA,NA,NA,NA,NA,NA,"stop","L60S G101* N130K",3
"lib1","SARS-CoV-2","GAGATGTCAAACGAGG",2,16.65,10.33,-0.43,0.09,2.86,1.01,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","GAGATGTCAATTAAAA",1,25.45,10.74,-0.03,0.05,2.98,1.01,0,">1 nonsynonymous","C61S P197K",2
"lib1","SARS-CoV-2","GAGATGTCGTGATAAT",2,26.04,9.95,-0.82,0.12,2.66,1.04,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","GAGATGTCTATGAAAC",1,13.82,10.68,-0.08,0.09,2.86,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGATTAAACTGAATG",3,97.55,8.85,-1.91,0.07,2.79,1.08,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","GAGATTAATAAATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4T N107*",2
"lib1","SARS-CoV-2","GAGATTACACATCTCT",1,6.54,10.53,-0.24,0.16,2.68,1.2,0.02,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","GAGATTACATGATCCA",1,2.49,NA,NA,NA,NA,NA,NA,"stop","Q84Y D90S D98*",3
"lib1","SARS-CoV-2","GAGATTACCACCTCAT",3,11.03,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","N1R C6D A67H N118D S129G G146C C150G Q168L",8
"lib1","SARS-CoV-2","GAGATTACCCACCCTG",3,14.04,6.45,-4.31,0.28,3,1.12,0.01,">1 nonsynonymous","V20G A42V P96S S129R",4
"lib1","SARS-CoV-2","GAGATTACTATGCAAC",7,122.48,10.76,0,0.06,2.85,1.07,0,"1 nonsynonymous","N24K",1
"lib1","SARS-CoV-2","GAGATTAGAAAAATAT",3,37.42,7.6,-3.17,0.43,1.5,1.07,0.05,">1 nonsynonymous","S41G A105H R136H",3
"lib1","SARS-CoV-2","GAGATTAGAACAAGAA",12,160.52,9.23,-1.54,0.11,1.99,1.1,0,">1 nonsynonymous","A14Y F44W G155N",3
"lib1","SARS-CoV-2","GAGATTAGAGAATGTG",8,104.41,10.6,-0.16,0.04,2.93,1.02,0,"1 nonsynonymous","F185L",1
"lib1","SARS-CoV-2","GAGATTAGCCAATGGC",2,19.78,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F8T N92V G166T",3
"lib1","SARS-CoV-2","GAGATTATCATCATGA",2,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y C150K T170F",3
"lib1","SARS-CoV-2","GAGATTATTTAACTGT",7,0.43,NA,NA,NA,NA,NA,NA,"stop","T85* F99L G146R",3
"lib1","SARS-CoV-2","GAGATTCACATTAGAA",8,104.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F W23S S184L",3
"lib1","SARS-CoV-2","GAGATTCATTTTTTTG",4,8.72,10.28,-0.48,0.12,2.74,1,0,">1 nonsynonymous","C6V T148L",2
"lib1","SARS-CoV-2","GAGATTCCAAGTGCTC",4,125.68,10.57,-0.19,0.05,2.82,1.03,0,">1 nonsynonymous","N1F V65L",2
"lib1","SARS-CoV-2","GAGATTCCTAGATAAA",6,75.2,8.91,-1.86,0.08,2.74,1.14,0,">1 nonsynonymous","A105S G146R",2
"lib1","SARS-CoV-2","GAGATTCCTATTGACC",4,35.43,6.2,-4.57,0.92,1.5,1.19,0.04,">1 nonsynonymous","D97T W106Y P149F Y159K",4
"lib1","SARS-CoV-2","GAGATTCCTCCGAAAC",2,41.52,10.69,-0.07,0.08,2.84,1.1,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","GAGATTCGAAAATACA",4,51.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W E10W V37Q D68W",4
"lib1","SARS-CoV-2","GAGATTCTTACTTTCC",6,46.06,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G51D C102T",2
"lib1","SARS-CoV-2","GAGATTGAAAAGTTCC",1,8.93,10.16,-0.6,0.1,2.85,1,0.01,">1 nonsynonymous","T3K C61G T100S",3
"lib1","SARS-CoV-2","GAGATTGAGCGAGAGC",2,57.09,8.71,-2.06,0.43,1.5,1,0.07,">1 nonsynonymous","Y66T N107S F126T",3
"lib1","SARS-CoV-2","GAGATTGAGTATTAAG",2,29.5,6,-4.76,1.48,1.5,1.18,0.03,">1 nonsynonymous","F44K G51S Y119W T201C",4
"lib1","SARS-CoV-2","GAGATTGATGTGATTA",2,10.12,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A105R N118L G166Q L183F T201R",5
"lib1","SARS-CoV-2","GAGATTGCAGAATATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S G83M E141L V153I Q168R",5
"lib1","SARS-CoV-2","GAGATTGCATTTAAAT",1,28.68,9.99,-0.78,0.11,2.07,1,0.01,">1 nonsynonymous","R16L T63W T100N",3
"lib1","SARS-CoV-2","GAGATTGGTATATGAG",2,24.41,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23M F62R A89L",3
"lib1","SARS-CoV-2","GAGATTTAGTGAAATA",7,63.3,10.28,-0.48,0.05,2.96,1,0,">1 nonsynonymous","V37G L57F",2
"lib1","SARS-CoV-2","GAGATTTCAAACACTA",2,12.74,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","P96R G166P",2
"lib1","SARS-CoV-2","GAGATTTCCAGCATTT",1,17.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A33N C49G T55S T63S A190S",5
"lib1","SARS-CoV-2","GAGATTTCGAACTCAG",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N P96I",2
"lib1","SARS-CoV-2","GAGATTTGTCCCCAAT",5,17.42,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T15W N64K I142K R179T",4
"lib1","SARS-CoV-2","GAGCAAAAACTTCTGT",3,16.06,6.64,-4.13,0.54,1.5,1.24,0.04,">1 nonsynonymous","S43T N107I K114L",3
"lib1","SARS-CoV-2","GAGCAAAAAGTGCTAA",1,35.52,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y66P G146N",2
"lib1","SARS-CoV-2","GAGCAAAACGAGACGC",7,109.88,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9M R124Y",2
"lib1","SARS-CoV-2","GAGCAAAAGGGCATGT",2,8.65,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S41M Y93R R179V T201M",4
"lib1","SARS-CoV-2","GAGCAAAAGTAACAAT",1,19.18,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A33E K87Q P96S W106V L122P",5
"lib1","SARS-CoV-2","GAGCAAACACCTTAGA",5,26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17I K56D N118V E141R P149Y Y165I",6
"lib1","SARS-CoV-2","GAGCAAACAGCGCGTA",3,77.47,10.55,-0.21,0.07,2.96,1,0,">1 nonsynonymous","E141T V173C",2
"lib1","SARS-CoV-2","GAGCAAACAGTAATAA",2,39.88,9.03,-1.73,0.12,2.81,1.16,0.01,"1 nonsynonymous","F156D",1
"lib1","SARS-CoV-2","GAGCAAACGACATTAA",4,46.42,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L60W S113G G146Y N157D",4
"lib1","SARS-CoV-2","GAGCAAACTCTTACCT",11,196.9,10.7,-0.06,0.04,2.93,1.03,0,">1 nonsynonymous","D59Q P149G",2
"lib1","SARS-CoV-2","GAGCAAACTGCCCTAG",2,12.29,9.7,-1.06,0.28,1.84,1.11,0.02,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","GAGCAAAGGTGCGATC",9,80.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T3S P82V F99L F167L",4
"lib1","SARS-CoV-2","GAGCAAAGTCAAACTT",3,37.16,9.34,-1.42,0.21,1.7,1.14,0.02,">1 nonsynonymous","T55Y V77E",2
"lib1","SARS-CoV-2","GAGCAAATAATGTATT",8,36.7,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A89E C102F S200I",3
"lib1","SARS-CoV-2","GAGCAAATCCCTCTAG",2,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38C",1
"lib1","SARS-CoV-2","GAGCAAATTTACTAAA",5,119.05,10.77,0.01,0.05,2.89,1.09,0,"1 nonsynonymous","H189N",1
"lib1","SARS-CoV-2","GAGCAACAAAGGCAAG",2,5.68,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","N4R S19I P82Y F160C",4
"lib1","SARS-CoV-2","GAGCAACATGACATCG",2,15.65,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","G101S R127S",2
"lib1","SARS-CoV-2","GAGCAACCAAAAGAAT",1,6.13,10.87,0.11,0.08,2.94,1.01,0,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","GAGCAACGAAGAATAG",4,238.88,7.53,-3.23,0.12,1.68,1.12,0,">1 nonsynonymous","N58S N157P S200L",3
"lib1","SARS-CoV-2","GAGCAACGAGTAAGAT",8,52.63,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I72Q I80R W106G N120S Y143P",5
"lib1","SARS-CoV-2","GAGCAACTATTTTCAA",2,29.11,8.66,-2.1,0.26,1.63,1.13,0.04,">1 nonsynonymous","D59F R127N",2
"lib1","SARS-CoV-2","GAGCAACTCTTGCGGA",3,26.46,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G86Y D112F",2
"lib1","SARS-CoV-2","GAGCAACTTGCGTACA",8,67.88,6,-4.76,0.98,1.5,1.17,0.01,">1 nonsynonymous","S36G I80M G101C F156M",4
"lib1","SARS-CoV-2","GAGCAACTTGGACTAA",2,44.52,9.79,-0.97,0.07,2.62,1.12,0,">1 nonsynonymous","S45Y G155E",2
"lib1","SARS-CoV-2","GAGCAACTTTGATTAT",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120S F160W",2
"lib1","SARS-CoV-2","GAGCAAGAAAAAATAG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","R16L D34L I104* R136F T201S",5
"lib1","SARS-CoV-2","GAGCAAGACGATCCAA",2,13.52,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L5S S45G D137R",3
"lib1","SARS-CoV-2","GAGCAAGCCAACTTAC",6,0.46,NA,NA,NA,NA,NA,NA,"stop","R25L Y93F K114E N130L N151*",5
"lib1","SARS-CoV-2","GAGCAAGCCGGATGCA",4,89.01,10.07,-0.69,0.05,2.94,1,0,">1 nonsynonymous","K87L E154D",2
"lib1","SARS-CoV-2","GAGCAAGCGGGCAGAC",4,38.78,10.65,-0.11,0.07,2.95,1,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","GAGCAAGGTATAAACA",7,19.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L N13T L38C R78C",4
"lib1","SARS-CoV-2","GAGCAAGTTAAACTAA",1,30.1,10.65,-0.11,0.04,2.95,1.04,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","GAGCAATACATTAATA",12,237.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59P N151T G172S",3
"lib1","SARS-CoV-2","GAGCAATACGGGCCTC",1,22.42,6.58,-4.19,0.67,1.5,1.06,0.05,">1 nonsynonymous","N40S S69A L95F",3
"lib1","SARS-CoV-2","GAGCAATCAAGCACGT",6,34.93,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","L95A A145V",2
"lib1","SARS-CoV-2","GAGCAATGAAAGATAA",1,8.73,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8S A14F Y35E L122Y",4
"lib1","SARS-CoV-2","GAGCAATGAGGTGAAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","G9L S36E Y50A R73A N92E S113V D137K Y143* G146R Y165*",10
"lib1","SARS-CoV-2","GAGCAATGGTGCCACA",2,24.01,10.84,0.07,0.07,2.97,1,0,"1 nonsynonymous","S200I",1
"lib1","SARS-CoV-2","GAGCAATTTCATAAAC",6,91.76,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S41T L60S K94T S129T R179A",5
"lib1","SARS-CoV-2","GAGCACAAAACGTAAA",7,38.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101F",1
"lib1","SARS-CoV-2","GAGCACAACATCATTA",2,32.21,10.78,0.01,0.08,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCACAAGTATCCTA",4,80.28,10.63,-0.13,0.06,2.9,1.02,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","GAGCACAATCAGGTCT",10,167.49,10.67,-0.1,0.04,2.92,1.06,0,"1 nonsynonymous","R78T",1
"lib1","SARS-CoV-2","GAGCACACTGACACTT",5,33.6,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89V F99H T140R",3
"lib1","SARS-CoV-2","GAGCACAGATCTTAAT",3,10.06,9.86,-0.91,0.11,2.08,1,0,">1 nonsynonymous","I104G P149F V173Q P197A T201M",5
"lib1","SARS-CoV-2","GAGCACCACGATAGAT",8,68.16,8.83,-1.94,0.19,1.54,1.14,0.01,">1 nonsynonymous","K26D Y121W V173F",3
"lib1","SARS-CoV-2","GAGCACCAGGAAGCAA",2,20.84,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L38T F47S Y119I",3
"lib1","SARS-CoV-2","GAGCACCAGTACCCTA",7,73.94,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V32P T46P P96D",3
"lib1","SARS-CoV-2","GAGCACCCAACACTTA",3,22.32,10.73,-0.03,0.09,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGCACCCAACCCCGA",2,11.39,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T3K G9W S36A P54A R73L K94L",6
"lib1","SARS-CoV-2","GAGCACCCCCGAATCG",4,48.4,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","W23G K94A Q176A",3
"lib1","SARS-CoV-2","GAGCACCGCATAAATC",2,0.82,NA,NA,NA,NA,NA,NA,"stop","N13C Y39* P82T D112N Y121N R179V",6
"lib1","SARS-CoV-2","GAGCACGAAATACTTT",5,96.89,10.25,-0.52,0.05,2.82,1.03,0,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","GAGCACGAAATGACGC",10,120.94,10.61,-0.15,0.05,2.93,1.02,0,"1 nonsynonymous","N110C",1
"lib1","SARS-CoV-2","GAGCACGCTAACACAG",3,27.78,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N40D T55V P133A Y178G",4
"lib1","SARS-CoV-2","GAGCACGGATGTCTTT",14,31.8,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","GAGCACGGTACTCAAA",3,0.23,NA,NA,NA,NA,NA,NA,"stop","F12* N110T V173F",3
"lib1","SARS-CoV-2","GAGCACGTAAAAGGCA",2,21.51,6.1,-4.66,1.15,1.5,1.25,0.03,">1 nonsynonymous","L5P I28Q K56T Y178I",4
"lib1","SARS-CoV-2","GAGCACGTAGCGCGAT",3,20.79,7.83,-2.94,0.25,1.5,1.18,0.02,">1 nonsynonymous","C61L V77A P169T",3
"lib1","SARS-CoV-2","GAGCACTCAAATTTAT",1,45.27,10.42,-0.34,0.06,2.94,1.02,0,">1 nonsynonymous","D98Y K114E",2
"lib1","SARS-CoV-2","GAGCAGAAAGCACAAA",8,167.92,10.7,-0.07,0.04,2.95,1,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","GAGCAGAATACAACTC",2,5.99,6.96,-3.8,0.27,1.94,1.21,0.02,">1 nonsynonymous","P7T G86T",2
"lib1","SARS-CoV-2","GAGCAGACAAAAGATG",2,23.97,8.25,-2.51,0.2,1.5,1.11,0.01,">1 nonsynonymous","Y35N N64S G155I",3
"lib1","SARS-CoV-2","GAGCAGACACACTACC",6,66.98,10.65,-0.12,0.04,2.94,1.01,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","GAGCAGACGCATGGAA",1,22.92,10.82,0.06,0.12,2.79,1.13,0.01,"1 nonsynonymous","T85N",1
"lib1","SARS-CoV-2","GAGCAGACTATACCCG",10,144.93,8.73,-2.03,0.09,2.19,1.11,0,">1 nonsynonymous","A105M P169Q",2
"lib1","SARS-CoV-2","GAGCAGACTCACAGTA",6,62.53,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","P7T R136G Q168P F185M",4
"lib1","SARS-CoV-2","GAGCAGATAATTATTA",3,26.98,6.56,-4.2,0.54,1.5,1.2,0.02,">1 nonsynonymous","A14T R27I S43L F70S S147N",5
"lib1","SARS-CoV-2","GAGCAGATTCAAACGT",3,23.55,8.79,-1.97,0.13,2.58,1.2,0.01,">1 nonsynonymous","E154G T170C",2
"lib1","SARS-CoV-2","GAGCAGCACGAGACTA",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S A14E F47G T85S L95R",5
"lib1","SARS-CoV-2","GAGCAGCAGAATAAAA",2,14.19,6,-4.76,1.21,3,1.1,0,">1 nonsynonymous","Y39T L57R P82Y",3
"lib1","SARS-CoV-2","GAGCAGCAGTATTCAG",20,163.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V52I L131W C158R Q168H",4
"lib1","SARS-CoV-2","GAGCAGCATCCGAAAC",14,189.96,10.72,-0.05,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCAGGAGGACGAGG",4,2.25,NA,NA,NA,NA,NA,NA,"stop","G86* F167C",2
"lib1","SARS-CoV-2","GAGCAGGTACGTTATT",4,42.98,9.65,-1.11,0.12,2,1.12,0.01,">1 nonsynonymous","C6K F12V K56D",3
"lib1","SARS-CoV-2","GAGCAGTCCCGCAAAC",6,49.34,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y50D I104D N120L Y143S F156Y",5
"lib1","SARS-CoV-2","GAGCAGTGAACTAAGA",3,22.07,8.52,-2.24,0.31,1.5,1.12,0.04,">1 nonsynonymous","N1T A14R N40G Q144F",4
"lib1","SARS-CoV-2","GAGCAGTGCCAGTCGC",9,106.46,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V20M S69V K87A G117V",4
"lib1","SARS-CoV-2","GAGCAGTGTCAAAAAT",5,39.46,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C6N D137F",2
"lib1","SARS-CoV-2","GAGCATAAGAGTAGTT",3,40.22,8.05,-2.72,0.08,2.22,1.09,0,">1 nonsynonymous","D90Y Y159I",2
"lib1","SARS-CoV-2","GAGCATAATGCTTAAG",3,147.62,10.6,-0.16,0.06,2.9,1.06,0,">1 nonsynonymous","A18R R27K",2
"lib1","SARS-CoV-2","GAGCATACATTAATAT",2,8.94,6,-4.76,2,2.9,1.26,0.03,">1 nonsynonymous","V71R T100M N107S Y119I",4
"lib1","SARS-CoV-2","GAGCATAGAAGTCTTG",1,21.62,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","G83A I142Y P161F R179L",4
"lib1","SARS-CoV-2","GAGCATATAGCATCAA",2,4.3,NA,NA,NA,NA,NA,NA,"stop","N1Y V32*",2
"lib1","SARS-CoV-2","GAGCATCAAACTTTAG",5,21.11,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y66T Y93L D112H N120Q Y165S",5
"lib1","SARS-CoV-2","GAGCATCCAGAACATT",9,112.92,10.19,-0.58,0.08,2.55,1.03,0,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","GAGCATCCAGTCAGTG",1,45.56,10.75,-0.01,0.07,2.94,1.03,0,">1 nonsynonymous","V11I Y35W P54L",3
"lib1","SARS-CoV-2","GAGCATCCGTATAACA",4,212.29,10.58,-0.18,0.03,2.9,1.03,0,"1 nonsynonymous","A33V",1
"lib1","SARS-CoV-2","GAGCATCTACTATTTG",2,24.85,10.7,-0.07,0.21,2.82,1.09,0.01,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","GAGCATGAAAAGAACT",6,37.47,7.08,-3.69,0.23,1.5,1.21,0.01,">1 nonsynonymous","D90L V103L",2
"lib1","SARS-CoV-2","GAGCATGCACGAATCT",5,47.17,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F12R N157S",2
"lib1","SARS-CoV-2","GAGCATGCCAAAAAAG",3,31.44,9.65,-1.11,0.1,2.57,1.04,0,">1 nonsynonymous","C61T N107K",2
"lib1","SARS-CoV-2","GAGCATGCGCACATAT",3,58.11,10.67,-0.1,0.06,2.86,1.02,0,">1 nonsynonymous","Y39L F62L D98A Y123K",4
"lib1","SARS-CoV-2","GAGCATGTCGCATAAC",7,79.07,10.75,-0.02,0.04,2.91,1.03,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","GAGCATTCAAACGAGA",1,37.3,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V37A L57Y P82L K94D L122R",5
"lib1","SARS-CoV-2","GAGCATTCTTTTGAAA",1,19.84,10.72,-0.04,0.05,2.81,1.12,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","GAGCATTGGCTCCAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35P L60S D97H Q176*",4
"lib1","SARS-CoV-2","GAGCCAAAACTCGATA",1,50.01,10.44,-0.33,0.07,2.86,1.07,0,"1 nonsynonymous","K56F",1
"lib1","SARS-CoV-2","GAGCCAAACTCTCCTT",4,41.65,8.39,-2.38,0.2,1.5,1.19,0.02,">1 nonsynonymous","A18L A89C S200F",3
"lib1","SARS-CoV-2","GAGCCAAGATACTCTA",2,26.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25T P96A Y119L R124H",4
"lib1","SARS-CoV-2","GAGCCAAGGGCTATAA",4,114.41,10.77,0,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCCAATACAACTAA",7,61.31,6.34,-4.42,0.98,1.5,1.31,0.06,">1 nonsynonymous","L60G V77W",2
"lib1","SARS-CoV-2","GAGCCAATTTAGTTTG",1,31.1,10.63,-0.14,0.05,2.96,1.04,0,"1 nonsynonymous","K199E",1
"lib1","SARS-CoV-2","GAGCCACACACACGAA",6,58.97,6.12,-4.65,0.77,1.5,1.15,0.02,">1 nonsynonymous","V52W Y91R Q144R P161F",4
"lib1","SARS-CoV-2","GAGCCACCTATAATAC",1,14.11,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N1S G9V V77E S113D E154L",5
"lib1","SARS-CoV-2","GAGCCAGAACCGATAA",6,0.6,NA,NA,NA,NA,NA,NA,"stop","I2V P7*",2
"lib1","SARS-CoV-2","GAGCCAGAACGCTTTC",2,38.04,10.63,-0.13,0.04,2.94,1.04,0,">1 nonsynonymous","N4K L60W",2
"lib1","SARS-CoV-2","GAGCCAGAGTGACGCA",1,45.51,10.25,-0.51,0.04,2.92,1,0,">1 nonsynonymous","L5N P96G L187H",3
"lib1","SARS-CoV-2","GAGCCAGCACACGGAT",4,44.36,6,-4.76,1.47,1.5,1.17,0.01,">1 nonsynonymous","W23E C61D V77T E135P",4
"lib1","SARS-CoV-2","GAGCCAGGCTTGTACG",7,15.65,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K94D Y123K F156H G196W",4
"lib1","SARS-CoV-2","GAGCCAGTGCAGTTCA",3,26.57,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S29P W106D K198H",3
"lib1","SARS-CoV-2","GAGCCATAGTCGTACC",5,237.3,8.42,-2.35,0.13,1.94,1.08,0.01,">1 nonsynonymous","Y91T Y119Q",2
"lib1","SARS-CoV-2","GAGCCATTTGCCACCA",1,45.01,10.12,-0.65,0.07,2.89,1.04,0,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","GAGCCCAAAATTCCCG",4,1.07,NA,NA,NA,NA,NA,NA,"stop","N4* N64S V103S",3
"lib1","SARS-CoV-2","GAGCCCAAACAAGCAT",4,0.31,NA,NA,NA,NA,NA,NA,"stop","P54L R73P T100* F126S",4
"lib1","SARS-CoV-2","GAGCCCACAAATGAAC",11,5.61,NA,NA,NA,NA,NA,NA,"stop","N4H D59* F167I",3
"lib1","SARS-CoV-2","GAGCCCAGACTTTTGC",6,130.46,10.75,-0.02,0.07,2.87,1.06,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","GAGCCCATACTCGCCT",1,13.4,10.54,-0.23,0.13,2.61,1.36,0.02,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","GAGCCCATGAACCGCT",1,7.54,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","S19A A33L Y91G P197F",4
"lib1","SARS-CoV-2","GAGCCCCCACCTAATG",4,81.5,10.73,-0.04,0.06,2.95,1.01,0,"1 nonsynonymous","R78F",1
"lib1","SARS-CoV-2","GAGCCCCCATATGCCA",7,68.79,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A18Y S45M D90T F156D",4
"lib1","SARS-CoV-2","GAGCCCCGTAGAATAC",3,83.22,10.93,0.16,0.08,2.88,1.01,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","GAGCCCCTAAAACTAC",10,52.62,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N13L S29T V37Q Y93N",4
"lib1","SARS-CoV-2","GAGCCCCTACCCTAAT",1,2487.43,9.94,-0.82,0.04,2.91,1.02,0,">1 nonsynonymous","L5S I28L T55S K114G",4
"lib1","SARS-CoV-2","GAGCCCCTTAAGTGCA",1,11.15,8.89,-1.87,0.08,2.91,1.11,0,">1 nonsynonymous","A14Y L125T",2
"lib1","SARS-CoV-2","GAGCCCCTTCGAAATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102K",1
"lib1","SARS-CoV-2","GAGCCCGAGGTTACGG",4,190.62,10.73,-0.03,0.03,2.92,1.04,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","GAGCCCGTGCCAGAAA",8,100.29,6,-4.76,1.52,1.5,1.25,0.04,">1 nonsynonymous","K87E F99L N110V T170Y",4
"lib1","SARS-CoV-2","GAGCCCTAAAGACCGT",1,31.14,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5P W106R Y159F Y175Q",4
"lib1","SARS-CoV-2","GAGCCCTAATTGAAAG",2,10.4,9.4,-1.36,0.3,1.5,1,0.06,">1 nonsynonymous","S45F P96R",2
"lib1","SARS-CoV-2","GAGCCCTACACACCGC",2,0.52,NA,NA,NA,NA,NA,NA,"stop","N4* S29F G83I K87L",4
"lib1","SARS-CoV-2","GAGCCCTTATCCAAGC",5,29.26,6,-4.76,2,3,1.22,0,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","GAGCCCTTCCAGATTC",3,41.33,10.79,0.03,0.06,2.84,1.12,0,">1 nonsynonymous","V37I S43V",2
"lib1","SARS-CoV-2","GAGCCGAAGGCAGAGA",1,49.2,10.2,-0.56,0.07,2.47,1.03,0,">1 nonsynonymous","D59N G83V",2
"lib1","SARS-CoV-2","GAGCCGACGTAGCAAG",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L R73A V77F D90V G101N E154V",6
"lib1","SARS-CoV-2","GAGCCGACTAGCCATA",2,62.05,10.87,0.1,0.05,2.92,1.05,0,"1 nonsynonymous","V153K",1
"lib1","SARS-CoV-2","GAGCCGACTCTCCGAT",5,94.51,10.82,0.06,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCCGACTGTAAGAT",4,50.7,8.32,-2.44,0.21,1.5,1.14,0.01,">1 nonsynonymous","C6T P96R",2
"lib1","SARS-CoV-2","GAGCCGAGCGCTATGA",2,37.06,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64S N92K N130Q",3
"lib1","SARS-CoV-2","GAGCCGATCTCGTTCT",2,35.63,10.18,-0.59,0.12,2.26,1.06,0.01,">1 nonsynonymous","S36T K94S",2
"lib1","SARS-CoV-2","GAGCCGCCATCGCATC",10,86.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y35T G51I K128R",3
"lib1","SARS-CoV-2","GAGCCGCTCATAGTAC",4,78.39,8.91,-1.86,0.07,2.86,1.08,0,">1 nonsynonymous","A18V F126Y",2
"lib1","SARS-CoV-2","GAGCCGCTTCCCGCAC",3,7.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53T L95Y V103E Q176L",4
"lib1","SARS-CoV-2","GAGCCGCTTGTACTGT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","T15G G117V S147*",3
"lib1","SARS-CoV-2","GAGCCGGCCAGAGCAG",4,22.68,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6S N64L D98M L111T",4
"lib1","SARS-CoV-2","GAGCCGGGCCATTATC",3,48.67,6,-4.76,1.56,1.5,1.15,0.01,">1 nonsynonymous","A33R F70I Y119V L131S",4
"lib1","SARS-CoV-2","GAGCCGGTCCTACAGG",1,38.52,10.63,-0.14,0.09,2.79,1.18,0,"1 nonsynonymous","L60Y",1
"lib1","SARS-CoV-2","GAGCCGGTTAACAACC",7,112.64,9.56,-1.2,0.11,1.69,1.09,0,">1 nonsynonymous","T100E P133I",2
"lib1","SARS-CoV-2","GAGCCGTAAAGCTACC",3,0.16,NA,NA,NA,NA,NA,NA,"stop","D97N D137Y F167* Y178T",4
"lib1","SARS-CoV-2","GAGCCGTATGTACATT",15,169.45,10.74,-0.02,0.05,2.92,1.02,0,"1 nonsynonymous","F160M",1
"lib1","SARS-CoV-2","GAGCCTAACCATAGTT",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G S69Q I104K N110S",4
"lib1","SARS-CoV-2","GAGCCTAATGTGCACA",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","GAGCCTACTAGGACAT",14,196.01,10.73,-0.04,0.05,2.85,1.03,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","GAGCCTATTCATTTAA",1,43.86,10.65,-0.12,0.04,2.95,1.02,0,">1 nonsynonymous","I2F A145S",2
"lib1","SARS-CoV-2","GAGCCTATTGTTCTCT",3,69.28,9.7,-1.06,0.12,2.1,1.07,0.01,">1 nonsynonymous","C61M V77T G155S",3
"lib1","SARS-CoV-2","GAGCCTCAAACTAAAT",10,113.97,6.15,-4.62,0.88,1.5,1.22,0.03,">1 nonsynonymous","E10F F70Y",2
"lib1","SARS-CoV-2","GAGCCTCATTCTAAAG",2,27.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N107A S113T Y119C S147L",5
"lib1","SARS-CoV-2","GAGCCTCATTTCCTGG",3,46.63,10.7,-0.07,0.05,2.99,1,0,">1 nonsynonymous","V32D T85R T201G",3
"lib1","SARS-CoV-2","GAGCCTCCAGCTCCAG",3,47.41,8.84,-1.93,0.15,2.04,1.05,0.01,">1 nonsynonymous","Q84I S113A G146D Y178W",4
"lib1","SARS-CoV-2","GAGCCTCCAGTGAGTT",1,950.31,8.94,-1.82,0.11,1.96,1.12,0,">1 nonsynonymous","R27I N107H K132A",3
"lib1","SARS-CoV-2","GAGCCTCTAAGACGCA",2,6.97,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","C6K G83Y Y93R G117N Y178H",5
"lib1","SARS-CoV-2","GAGCCTCTTCATAGAG",3,6.16,8.22,-2.55,0.55,1.5,1,0.08,">1 nonsynonymous","D97C L183R",2
"lib1","SARS-CoV-2","GAGCCTGCAAGAAGTA",9,100.74,10.59,-0.18,0.05,2.92,1.04,0,"1 nonsynonymous","G174N",1
"lib1","SARS-CoV-2","GAGCCTGTTACCGTCT",5,54.68,8.07,-2.69,0.19,1.52,1.2,0.02,">1 nonsynonymous","N107V F160I",2
"lib1","SARS-CoV-2","GAGCCTTACCTTCATG",4,30.24,10.87,0.11,0.07,2.81,1.13,0,">1 nonsynonymous","L122K E141F P149N",3
"lib1","SARS-CoV-2","GAGCCTTAGTAAGCAA",3,72.11,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7M K94T",2
"lib1","SARS-CoV-2","GAGCCTTATATACGAC",5,21.36,8.03,-2.73,0.35,1.5,1,0.07,">1 nonsynonymous","N107H S129K I138F",3
"lib1","SARS-CoV-2","GAGCCTTATGAAGGGG",5,57.7,10.87,0.1,0.07,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCCTTTAAACCTAA",3,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I N151K",2
"lib1","SARS-CoV-2","GAGCCTTTGCTTTACA",2,37.7,8.59,-2.17,0.11,3,1.03,0,">1 nonsynonymous","N4Q V37E N157R",3
"lib1","SARS-CoV-2","GAGCGAAAAAGAACTT",7,11.56,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L5F A67Y D112V V180Y",4
"lib1","SARS-CoV-2","GAGCGAAACCAGTAAC",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N V65D F99N E141P",4
"lib1","SARS-CoV-2","GAGCGAAATATTGCCA",1,9.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3G W23R K198E",3
"lib1","SARS-CoV-2","GAGCGAAGACAGTATT",3,29.89,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y50V Y175L S184K",3
"lib1","SARS-CoV-2","GAGCGAATTAAACGCC",9,98.89,8.24,-2.52,0.25,1.5,1,0.03,">1 nonsynonymous","I28A A42V F62H Q144T",4
"lib1","SARS-CoV-2","GAGCGACAGAAATAAG",3,22.92,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Y21H Y35K T63A D98V S147T T170L",6
"lib1","SARS-CoV-2","GAGCGACAGATCACGG",2,28.36,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F47I R73E A145I",3
"lib1","SARS-CoV-2","GAGCGACCCACCCACT",4,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39M S45T V115G F160C",4
"lib1","SARS-CoV-2","GAGCGACGCGAACAAA",8,95.56,10.64,-0.13,0.04,2.91,1.03,0,">1 nonsynonymous","L5Y T140Y V173E",3
"lib1","SARS-CoV-2","GAGCGACTGTAACCCG",6,5.3,NA,NA,NA,NA,NA,NA,"stop","Y50* K56M Y121N P149E Y159S",5
"lib1","SARS-CoV-2","GAGCGAGATCAAGTCG",1,16.05,10.93,0.17,0.12,2.85,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GAGCGAGTGTGATCCC",2,16.22,6,-4.76,2,1.5,1.26,0.05,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","GAGCGATTGCTAAAAG",4,60.4,8.96,-1.81,0.23,1.5,1.05,0.02,"1 nonsynonymous","R25M",1
"lib1","SARS-CoV-2","GAGCGCACGATAAGAC",13,168.3,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62D W106G E154L P177A",4
"lib1","SARS-CoV-2","GAGCGCATGGGTAACG",3,21.3,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S69E L95T",2
"lib1","SARS-CoV-2","GAGCGCCATAAGCGGA",3,10.27,7.35,-3.41,0.13,2.26,1.04,0,">1 nonsynonymous","L5Y T100S P133Q T170E",4
"lib1","SARS-CoV-2","GAGCGCCCCACCCAAA",2,46.44,10.76,0,0.05,2.91,1.03,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","GAGCGCGCTACGCTAC",3,69.64,10.23,-0.53,0.06,2.76,1.04,0,">1 nonsynonymous","S43F L57A",2
"lib1","SARS-CoV-2","GAGCGCTACCGACCAG",3,26.69,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","R25G F99N N151H",3
"lib1","SARS-CoV-2","GAGCGCTACCTAAGTA",3,16.96,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","S45Y P96A G101S N120T F134S",5
"lib1","SARS-CoV-2","GAGCGCTTTATTTGCT",2,26.02,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","E10Y G152R T170V",3
"lib1","SARS-CoV-2","GAGCGGAACCAGTATA",2,15.18,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","K26A P54M D90H V103F C150Y",5
"lib1","SARS-CoV-2","GAGCGGAGACACACGC",1,11.49,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","P82L N157F",2
"lib1","SARS-CoV-2","GAGCGGATAAGCCGCA",4,70.41,8.65,-2.11,0.1,2.62,1.07,0,">1 nonsynonymous","Y119L I138F",2
"lib1","SARS-CoV-2","GAGCGGATTTCATTCA",9,73.99,9.56,-1.2,0.14,1.99,1.13,0.01,">1 nonsynonymous","T3V F62V D112L S164A",4
"lib1","SARS-CoV-2","GAGCGGGAACCGCAGT",7,144.18,10.81,0.04,0.06,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCGGGATTAAGCTA",1,19.69,7.02,-3.74,0.55,1.5,1.1,0.05,">1 nonsynonymous","C6V F44W T55N F70G R136V E141I P149E Y165G",8
"lib1","SARS-CoV-2","GAGCGGGCTACACGTT",2,30.65,9.69,-1.08,0.1,1.95,1.14,0,">1 nonsynonymous","A22G G51Q L60V",3
"lib1","SARS-CoV-2","GAGCGGGGCTAAAGCA",4,147.87,6,-4.76,1.28,1.5,1.26,0.02,">1 nonsynonymous","F44K L60M T100K F134R G155L P161S V173P",7
"lib1","SARS-CoV-2","GAGCGGGGTAAACGGT",8,130.95,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12G D34G G101F Y119L Y178W",5
"lib1","SARS-CoV-2","GAGCGGTGATTAAGCA",2,20.62,9.07,-1.69,0.17,2.43,1.08,0.01,">1 nonsynonymous","D34S G174V",2
"lib1","SARS-CoV-2","GAGCGGTTCAGCAGCA",1,25.5,10.77,0,0.08,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCGTAACCCAAAGG",3,10.17,6,-4.76,2,1.5,1.29,0.03,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","GAGCGTACACACAAAC",4,16.29,6,-4.76,2,3,1.35,0.01,">1 nonsynonymous","W106R Y123M L131Y E154V G174L",5
"lib1","SARS-CoV-2","GAGCGTAGATCACCAC",3,14.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61G R127M I142T",3
"lib1","SARS-CoV-2","GAGCGTAGCAATGACA",11,0.83,NA,NA,NA,NA,NA,NA,"stop","F12V K114* L122Y P133A P191Q",5
"lib1","SARS-CoV-2","GAGCGTGATATGTAAA",6,75.13,10.67,-0.09,0.05,2.96,1.02,0,">1 nonsynonymous","C61F F160H",2
"lib1","SARS-CoV-2","GAGCGTGTTGTTAATC",6,0.83,NA,NA,NA,NA,NA,NA,"stop","R73W Y91P V103I S108* V153L S184*",6
"lib1","SARS-CoV-2","GAGCGTTCGCACTAAA",5,31.8,8.69,-2.08,0.24,1.53,1.27,0.02,">1 nonsynonymous","I2R F47L D98G I138Q P149L Q168S",6
"lib1","SARS-CoV-2","GAGCGTTCTAGCGCAA",1,39.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6G A14Y D98T N130R Y175M K198C",6
"lib1","SARS-CoV-2","GAGCGTTGAACCTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* V20G D34A D68E",4
"lib1","SARS-CoV-2","GAGCGTTGTAGAAAAT",1,10.15,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S29M C150A",2
"lib1","SARS-CoV-2","GAGCGTTTAAATTAGG",7,157.19,7.03,-3.74,0.17,1.5,1.16,0.01,">1 nonsynonymous","S29F T63S C158S",3
"lib1","SARS-CoV-2","GAGCTAAAAGACGCTG",5,23.17,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","V77T N107H L183P F185S",4
"lib1","SARS-CoV-2","GAGCTAAATAATCCAC",10,0.55,NA,NA,NA,NA,NA,NA,"stop","P96* I142F",2
"lib1","SARS-CoV-2","GAGCTAAGATTATGGA",3,136.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N30C Y159C",2
"lib1","SARS-CoV-2","GAGCTAATAATCAACT",2,31.06,10.93,0.16,0.08,2.94,1.02,0,">1 nonsynonymous","N4G T46L",2
"lib1","SARS-CoV-2","GAGCTAATACCGTATT",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R S200I",2
"lib1","SARS-CoV-2","GAGCTAATACTCATAA",4,27.2,10.48,-0.28,0.06,2.91,1.05,0,">1 nonsynonymous","T3V G9L S41T T193Y V194G",5
"lib1","SARS-CoV-2","GAGCTAATGACTATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K56M S113G S147*",3
"lib1","SARS-CoV-2","GAGCTACAAAGTACAT",2,45.7,10.31,-0.45,0.03,2.88,1.02,0,">1 nonsynonymous","S41L D97F",2
"lib1","SARS-CoV-2","GAGCTACAAGTAATTT",12,207.23,10.79,0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCTACCAGTTAAAT",4,7.69,11.07,0.3,0.11,2.96,1,0,"1 nonsynonymous","V173C",1
"lib1","SARS-CoV-2","GAGCTACGAAAACTGA",2,14.87,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A22C Y119V R124H G146W",4
"lib1","SARS-CoV-2","GAGCTACGAGTACGAG",5,99.54,10.24,-0.53,0.04,2.84,1.01,0,">1 nonsynonymous","A14E A33Q",2
"lib1","SARS-CoV-2","GAGCTACGTTAGCACA",1,12.67,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K94M A105K S164N",3
"lib1","SARS-CoV-2","GAGCTAGAAGCACCGG",4,40.16,9.15,-1.61,0.09,2.67,1.13,0,">1 nonsynonymous","I28L N118L C195R",3
"lib1","SARS-CoV-2","GAGCTAGATATACTAG",3,61.97,6,-4.76,1.59,1.5,1.24,0.03,">1 nonsynonymous","L60S G86T D97V",3
"lib1","SARS-CoV-2","GAGCTAGCTAACAAGA",2,60.81,8.27,-2.49,0.16,1.88,1.1,0.01,">1 nonsynonymous","K48R A105F G166T",3
"lib1","SARS-CoV-2","GAGCTAGGGACATTAG",2,0.62,NA,NA,NA,NA,NA,NA,"stop","E10I D34C L60N K87E G166*",5
"lib1","SARS-CoV-2","GAGCTATAATATATTA",2,36.62,10.79,0.03,0.03,2.96,1.02,0,"1 nonsynonymous","V32E",1
"lib1","SARS-CoV-2","GAGCTATCAATTTACC",3,25.39,7.93,-2.83,0.3,1.5,1.01,0.04,">1 nonsynonymous","S45C Y121P Y175H",3
"lib1","SARS-CoV-2","GAGCTATCCAGTCACC",1,29.73,8.06,-2.7,0.22,2.08,1.11,0.02,">1 nonsynonymous","S113L N151F S200W",3
"lib1","SARS-CoV-2","GAGCTATCTATTGAGA",4,81.56,10.76,0,0.07,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCTATGATTTATTA",1,27.15,8.59,-2.17,0.3,2.11,1.05,0.02,">1 nonsynonymous","F17A D59R K114F",3
"lib1","SARS-CoV-2","GAGCTATGGCGATAGG",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96C G146S",2
"lib1","SARS-CoV-2","GAGCTATGTCCACTCC",3,0.46,NA,NA,NA,NA,NA,NA,"stop","G9* S36I N40E",3
"lib1","SARS-CoV-2","GAGCTCAAAGATAAGG",1,11.84,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y35P K56L D112Y S113F",4
"lib1","SARS-CoV-2","GAGCTCAACAAGTACA",3,56.9,10.16,-0.61,0.08,2.62,1.07,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","GAGCTCAACCACAGTA",2,62.64,10.81,0.05,0.11,2.71,1.04,0,"1 nonsynonymous","A18H",1
"lib1","SARS-CoV-2","GAGCTCAATATCAAGA",6,173.39,10.67,-0.1,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGCTCACATTAGTCA",3,6.89,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F8V P54A N64A G101A N120G",5
"lib1","SARS-CoV-2","GAGCTCACTCTACTGA",2,19.51,10.14,-0.63,0.07,2.83,1,0,">1 nonsynonymous","T3A Y35G K48E",3
"lib1","SARS-CoV-2","GAGCTCCAAAAAAATT",3,30.29,6.33,-4.44,0.58,1.5,1.13,0.02,">1 nonsynonymous","G9K G51P R73M",3
"lib1","SARS-CoV-2","GAGCTCCATCGAGACA",6,50.73,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G9P F44M S113Q",3
"lib1","SARS-CoV-2","GAGCTCCGCGAGTGCG",8,4.48,NA,NA,NA,NA,NA,NA,"stop","S36L T55F V180* S200K",4
"lib1","SARS-CoV-2","GAGCTCTACTATGCGA",6,12.53,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","Q84S Y93S D98C",3
"lib1","SARS-CoV-2","GAGCTCTCACCCACAT",1,19.86,6.56,-4.2,0.86,1.5,1.2,0.07,">1 nonsynonymous","W23S F99I K198T",3
"lib1","SARS-CoV-2","GAGCTCTCGATTAGAA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib1","SARS-CoV-2","GAGCTCTCTTCTCCGG",4,29.19,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9T I28G D90V V182R",4
"lib1","SARS-CoV-2","GAGCTGAACCGAACCA",2,4.1,NA,NA,NA,NA,NA,NA,"stop","Y39* K114N",2
"lib1","SARS-CoV-2","GAGCTGAGAACATGAA",3,10.57,9.01,-1.75,0.11,2.73,1.1,0.01,">1 nonsynonymous","K56R T63A V77L A81T K87N",5
"lib1","SARS-CoV-2","GAGCTGAGGAACGATG",10,48.02,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3S F99R S129L P161K",4
"lib1","SARS-CoV-2","GAGCTGATCATATCAA",8,20.78,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L5S I80L F99N V180K",4
"lib1","SARS-CoV-2","GAGCTGATGCATGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S Y91V",2
"lib1","SARS-CoV-2","GAGCTGCACCATACAG",3,28.78,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V103Y L125Y S139N",3
"lib1","SARS-CoV-2","GAGCTGCCACCCTCGT",1,0.38,NA,NA,NA,NA,NA,NA,"stop","A14* K26S N151L",3
"lib1","SARS-CoV-2","GAGCTGCCCAGTCCCA",3,74.99,6.14,-4.63,0.71,1.5,1.24,0.02,">1 nonsynonymous","Y119A F126R Q144K G174P",4
"lib1","SARS-CoV-2","GAGCTGCCTTCCATTT",10,11.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G83N I88Y D112N N118K T140Q G146A",6
"lib1","SARS-CoV-2","GAGCTGCTTAGTGAGG",2,36.07,10.94,0.17,0.08,2.91,1.01,0,">1 nonsynonymous","I2F V37S Y91F",3
"lib1","SARS-CoV-2","GAGCTGTGAAACTAAG",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A D98N S129P",3
"lib1","SARS-CoV-2","GAGCTGTTTAGAGATT",1,9,9.55,-1.22,0.32,1.5,1.08,0.06,">1 nonsynonymous","W23S L60I",2
"lib1","SARS-CoV-2","GAGCTTAAACTCAAGC",1,0.55,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","GAGCTTAAATATTAAA",10,138.75,10.64,-0.13,0.04,2.89,1.04,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","GAGCTTACACCTTCTG",1,10.65,10.13,-0.63,0.35,1.78,1.08,0.03,"1 nonsynonymous","L131N",1
"lib1","SARS-CoV-2","GAGCTTACTGCTCACC",3,54.11,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A105I R127A Y165M",3
"lib1","SARS-CoV-2","GAGCTTAGCCATCGAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","Y35N Q84S Y93* L122* Y175F",5
"lib1","SARS-CoV-2","GAGCTTATACAATTAA",4,32.6,9.07,-1.69,0.18,1.71,1.18,0.01,">1 nonsynonymous","F8R A18G A22D",3
"lib1","SARS-CoV-2","GAGCTTATGGGTTAAT",3,16.35,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V11S V37A K48N G83S L111Y Q168G T201W",7
"lib1","SARS-CoV-2","GAGCTTCCACGATATA",11,159.46,10.62,-0.14,0.07,2.89,1.05,0,"1 nonsynonymous","Y91F",1
"lib1","SARS-CoV-2","GAGCTTCTCATGCGCA",5,21.67,9.35,-1.42,0.12,2.56,1.1,0.01,">1 nonsynonymous","V37K Y91H Y121L",3
"lib1","SARS-CoV-2","GAGCTTGGCAGAACCA",5,47.56,10.63,-0.13,0.05,2.81,1.06,0,">1 nonsynonymous","T3K V173G",2
"lib1","SARS-CoV-2","GAGCTTGGCATCTCTG",7,85.66,10.83,0.07,0.08,2.94,1.02,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","GAGCTTTAACAAATTA",4,105.95,10.71,-0.05,0.04,2.9,1.03,0,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","GAGCTTTAATGAGATG",9,69.52,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31K G146P",2
"lib1","SARS-CoV-2","GAGCTTTTATTTGCAG",1,1.84,NA,NA,NA,NA,NA,NA,"stop","L95M V103S Y123* Q163G",4
"lib1","SARS-CoV-2","GAGGAAAACGACCTGA",4,55.47,6.73,-4.04,0.21,1.5,1.17,0.01,">1 nonsynonymous","Y21L L131Y V173Y",3
"lib1","SARS-CoV-2","GAGGAAAAGACCTACC",4,50.48,9.99,-0.78,0.07,2.57,1,0,"1 nonsynonymous","A89H",1
"lib1","SARS-CoV-2","GAGGAAAAGGTGTAGT",2,1.3,NA,NA,NA,NA,NA,NA,"stop","D68E R73S Q144Y Y159* Y178I",5
"lib1","SARS-CoV-2","GAGGAAACAGCAATCA",11,203.71,10.63,-0.14,0.04,2.87,1.09,0,"1 nonsynonymous","Q144K",1
"lib1","SARS-CoV-2","GAGGAAACATCATAAA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","D90T I104H L122W I138N G146* T201S",6
"lib1","SARS-CoV-2","GAGGAAAGGGGAATTA",18,167.17,7.34,-3.42,0.21,1.5,1.14,0.01,">1 nonsynonymous","C61N K87Y D98S G146L T201P",5
"lib1","SARS-CoV-2","GAGGAAATCAAACGAT",6,95.27,10.69,-0.07,0.08,2.96,1.03,0,"1 nonsynonymous","S147G",1
"lib1","SARS-CoV-2","GAGGAAATCATTGATT",2,19.49,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","L5H C102S",2
"lib1","SARS-CoV-2","GAGGAAATTATAAAAA",1,23.38,10.65,-0.12,0.09,2.98,1,0,">1 nonsynonymous","S45N K114F",2
"lib1","SARS-CoV-2","GAGGAACAATGCACAA",5,120.66,9.33,-1.43,0.1,1.86,1.11,0,">1 nonsynonymous","V71T K128T Y178S",3
"lib1","SARS-CoV-2","GAGGAACACAACACGC",4,19.34,10.63,-0.13,0.06,2.98,1,0,">1 nonsynonymous","F8Y P54L T140R",3
"lib1","SARS-CoV-2","GAGGAACACAACTAAT",5,95.52,10.89,0.12,0.08,2.93,1.03,0,">1 nonsynonymous","S129D T148K",2
"lib1","SARS-CoV-2","GAGGAACACAAGTGCG",2,7.65,7.73,-3.03,0.43,1.5,1,0.07,">1 nonsynonymous","F99L P133S P161H",3
"lib1","SARS-CoV-2","GAGGAACCCGCTGACG",2,9.01,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8A A14F Y93C D112R",4
"lib1","SARS-CoV-2","GAGGAACCTTGCATAC",1,20.46,10.36,-0.4,0.04,2.94,1,0,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","GAGGAACGCACGGAGC",8,64.1,10.71,-0.06,0.13,2.57,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GAGGAACGTACACACT",3,34.2,8.96,-1.8,0.34,1.5,1,0.07,">1 nonsynonymous","F44A T63V D112L T140R",4
"lib1","SARS-CoV-2","GAGGAACTCATGTGTG",7,16.23,9.7,-1.06,0.15,2.55,1.05,0.01,">1 nonsynonymous","E10N F62D",2
"lib1","SARS-CoV-2","GAGGAACTCTAAAACA",1,16.81,10.76,0,0.08,2.8,1.13,0.01,">1 nonsynonymous","A18N I28F L38M D59Q",4
"lib1","SARS-CoV-2","GAGGAAGACAGAGCTA",2,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G G83D L111R Y121Q G146E",5
"lib1","SARS-CoV-2","GAGGAAGAGATTTATC",7,78.51,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","P96K S108N S139L Q168K",4
"lib1","SARS-CoV-2","GAGGAAGCATTAGCGC",10,185.47,10.18,-0.58,0.04,2.93,1.01,0,">1 nonsynonymous","R27I T63S P169Q",3
"lib1","SARS-CoV-2","GAGGAAGCCCATATCC",4,49.54,8.83,-1.94,0.26,1.5,1.1,0.02,">1 nonsynonymous","V37S K94V W106F",3
"lib1","SARS-CoV-2","GAGGAAGCTACAAGAG",2,82.35,7.11,-3.65,0.21,1.73,1.09,0.01,"1 nonsynonymous","Y159R",1
"lib1","SARS-CoV-2","GAGGAAGGGAAACCTG",9,138.6,10.8,0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGAAGTCGGACCTA",6,0.29,NA,NA,NA,NA,NA,NA,"stop","V77* S164T A192S P197S",4
"lib1","SARS-CoV-2","GAGGAATAACAAATGT",7,45.88,6,-4.76,2,3,1.2,0,">1 nonsynonymous","D68Q Q84H Y119M V181A K199I",5
"lib1","SARS-CoV-2","GAGGAATATGCGAATA",2,29.57,6.18,-4.58,1.4,1.5,1.2,0.04,">1 nonsynonymous","C61W N92Q I104T",3
"lib1","SARS-CoV-2","GAGGAATCCATCAAGT",1,44.72,10.79,0.03,0.06,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGAATCGAGTTCAG",2,2.13,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","GAGGAATCTTGAACAA",6,49.79,8.93,-1.83,0.12,2.7,1.1,0.01,">1 nonsynonymous","T85Y K132R F156C",3
"lib1","SARS-CoV-2","GAGGAATGAAGAGTCA",1,27.23,10.71,-0.05,0.04,2.99,1,0,">1 nonsynonymous","I2S Y39G",2
"lib1","SARS-CoV-2","GAGGAATTAATGTCTT",3,18.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R25V L57S G74S N107D N118D Q144L T170M",7
"lib1","SARS-CoV-2","GAGGAATTGAAATTTG",1,9.02,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S53P G86W D97Y N118G F160Y Y165C",6
"lib1","SARS-CoV-2","GAGGAATTTAACCCAA",1,69.02,10.52,-0.25,0.04,2.94,1,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","GAGGACAAAAGATACC",2,38.79,10.17,-0.59,0.04,2.86,1.03,0,"1 nonsynonymous","E10W",1
"lib1","SARS-CoV-2","GAGGACAAACTTTACT",1,14.74,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6Q L60S A81V Y123L",4
"lib1","SARS-CoV-2","GAGGACAAGACATTAA",2,53.02,9.75,-1.01,0.06,2.87,1.07,0,">1 nonsynonymous","Y119S E154S",2
"lib1","SARS-CoV-2","GAGGACAAGACTCAGT",2,28.32,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y93T G116Y",2
"lib1","SARS-CoV-2","GAGGACACTACCATAT",1,40.28,9.93,-0.84,0.1,2.1,1.03,0,">1 nonsynonymous","C61R T85L F134C",3
"lib1","SARS-CoV-2","GAGGACAGAATAAACG",1,11.65,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","F17S D59N A89L F126N",4
"lib1","SARS-CoV-2","GAGGACATAATAAGTG",4,70.61,10.79,0.03,0.08,2.91,1.03,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","GAGGACGCCCCAACCA",2,51.55,10.08,-0.69,0.07,2.77,1.02,0,">1 nonsynonymous","G9T N107P",2
"lib1","SARS-CoV-2","GAGGACGCCTGTGGTA",5,33.06,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","W106P S129I",2
"lib1","SARS-CoV-2","GAGGACGGCAGTATTC",7,62.37,9.82,-0.95,0.12,2.18,1.05,0.01,">1 nonsynonymous","T3S K94Y",2
"lib1","SARS-CoV-2","GAGGACGGCTACGGCA",4,29.58,6.04,-4.72,1.25,1.5,1.19,0.03,">1 nonsynonymous","A81G Y93H",2
"lib1","SARS-CoV-2","GAGGACTAATATTCCA",13,230.73,9.04,-1.73,0.06,2.8,1.09,0,">1 nonsynonymous","N4G G117C",2
"lib1","SARS-CoV-2","GAGGACTGTGCATGAA",1,1.64,NA,NA,NA,NA,NA,NA,"stop","S113V Q163G S200*",3
"lib1","SARS-CoV-2","GAGGAGACCTTCAATG",1,16.26,9.88,-0.88,0.11,1.95,1.04,0,">1 nonsynonymous","N4Q S41L F99L",3
"lib1","SARS-CoV-2","GAGGAGATAGACTCAA",11,297.06,9.88,-0.88,0.03,2.86,1.05,0,">1 nonsynonymous","R27L N171E",2
"lib1","SARS-CoV-2","GAGGAGATATTGACTA",2,15.35,6,-4.76,0.71,3,1.09,0.01,">1 nonsynonymous","S19E K48S P96F",3
"lib1","SARS-CoV-2","GAGGAGCAACCAATCC",7,47.74,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P82C F99T D112L",3
"lib1","SARS-CoV-2","GAGGAGCACTGTAGAC",4,94.17,10.28,-0.49,0.06,2.88,1.05,0,">1 nonsynonymous","T15K N58C T201V",3
"lib1","SARS-CoV-2","GAGGAGCCCGATATAC",6,198.54,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N107S C158G Y175F",3
"lib1","SARS-CoV-2","GAGGAGCCGTGCGGGC",7,133.67,10.02,-0.75,0.07,2.01,1.06,0,">1 nonsynonymous","V52T L60H D98Y",3
"lib1","SARS-CoV-2","GAGGAGCGATTTGGGG",3,12.9,8.25,-2.51,0.32,1.5,1.1,0.05,">1 nonsynonymous","S36Q C49S",2
"lib1","SARS-CoV-2","GAGGAGGACGTATCAC",2,37.88,10.8,0.04,0.05,2.92,1.04,0,">1 nonsynonymous","T140N T193A",2
"lib1","SARS-CoV-2","GAGGAGGCCCGAGAGG",2,19.77,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","Y35F I72Y N107M",3
"lib1","SARS-CoV-2","GAGGAGGCCCTCAAGC",10,264.39,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28C Y93V V115E K128E Q176L",5
"lib1","SARS-CoV-2","GAGGAGGCGAAAAACA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S F44K Y91L Y119N Y159R K199L",6
"lib1","SARS-CoV-2","GAGGAGGGCTTTGCCT",4,13.72,7.57,-3.19,0.12,2.14,1.12,0,">1 nonsynonymous","G86S G174H",2
"lib1","SARS-CoV-2","GAGGAGGTTGAGGACA",6,169.96,7.22,-3.55,0.15,1.5,1.12,0.01,">1 nonsynonymous","I142Y Y175E",2
"lib1","SARS-CoV-2","GAGGAGTGGGATAGCT",4,14.77,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","E10I Y50R Y119M H189Y",4
"lib1","SARS-CoV-2","GAGGAGTGTTTGCAAA",6,104.92,9.45,-1.32,0.12,1.87,1.15,0.01,">1 nonsynonymous","F12L Y91V",2
"lib1","SARS-CoV-2","GAGGAGTTGGAAACCC",1,3.48,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAGGATAAAAAACACA",2,49.31,10.65,-0.11,0.06,2.88,1.03,0,"1 nonsynonymous","L188P",1
"lib1","SARS-CoV-2","GAGGATAAACTTCCCG",1,76.57,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D112T Y119R Q144S Q176L",4
"lib1","SARS-CoV-2","GAGGATAACATACGGA",5,0.87,NA,NA,NA,NA,NA,NA,"stop","Y119Q F185*",2
"lib1","SARS-CoV-2","GAGGATACAAACGTTA",4,45.26,10.55,-0.21,0.06,2.88,1.11,0,">1 nonsynonymous","Y123S Y178H",2
"lib1","SARS-CoV-2","GAGGATAGACTCTCAA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","C61M K94Y P96H N107P C158L G166*",6
"lib1","SARS-CoV-2","GAGGATAGAGGAGAAT",2,5.71,10.7,-0.06,0.11,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGATATAACACTTG",1,17.83,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","V32M C49K G86S",3
"lib1","SARS-CoV-2","GAGGATATTATGTCAT",1,20.24,10.53,-0.23,0.06,2.92,1.01,0,">1 nonsynonymous","I2D K48Y L122S V153G",4
"lib1","SARS-CoV-2","GAGGATATTGATAAGG",10,97.59,10.45,-0.31,0.05,2.93,1,0,">1 nonsynonymous","L5P S36V P54G L125I",4
"lib1","SARS-CoV-2","GAGGATCAAACCCCCT",4,48.77,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50H N58M A89L Y123P",4
"lib1","SARS-CoV-2","GAGGATCACAACATGC",4,58.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10V D137Y Q168R V173C",4
"lib1","SARS-CoV-2","GAGGATCCCACTATAA",7,143.09,10.79,0.03,0.06,2.88,1.09,0,"1 nonsynonymous","T100M",1
"lib1","SARS-CoV-2","GAGGATCTAACTTGAG",4,15.45,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F47L G51Y T100F N107L",4
"lib1","SARS-CoV-2","GAGGATGACTTCAAAT",4,36.52,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V71Q Y178I",2
"lib1","SARS-CoV-2","GAGGATGCTATCTAAT",2,25.07,9.98,-0.79,0.1,2.91,1.03,0,">1 nonsynonymous","T63S S129N N151S F156S",4
"lib1","SARS-CoV-2","GAGGATTAAACGGCCA",7,70.27,10.12,-0.64,0.06,2.68,1,0,">1 nonsynonymous","N107G A190N S200C",3
"lib1","SARS-CoV-2","GAGGATTACCAAACTG",3,31.98,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","G83V I88F A105C N120S S129V",5
"lib1","SARS-CoV-2","GAGGATTATAGAGACA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib1","SARS-CoV-2","GAGGATTCCCTAAACA",5,38.83,9.86,-0.9,0.12,2.21,1.07,0.01,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","GAGGATTGAAGTGTCC",1,13.69,6,-4.76,1.71,3,1.31,0.01,">1 nonsynonymous","C61L Y159R",2
"lib1","SARS-CoV-2","GAGGATTTAAGGACTA",1,10.73,10.62,-0.15,0.16,2.8,1,0.01,">1 nonsynonymous","Y35V S41T R78H",3
"lib1","SARS-CoV-2","GAGGATTTGAGGCATT",3,6.57,6.56,-4.21,2,1.5,1.15,0.03,">1 nonsynonymous","P96I A145T",2
"lib1","SARS-CoV-2","GAGGCAAACTATAAAC",2,47.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D68M G101E K114D N120R Q168L",5
"lib1","SARS-CoV-2","GAGGCAAATACAATTT",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y Y143L",2
"lib1","SARS-CoV-2","GAGGCAACAACGAAGG",2,11.04,6,-4.76,2,3,1.06,0,">1 nonsynonymous","D97H G172M",2
"lib1","SARS-CoV-2","GAGGCAACAAGTGTCT",1,23.06,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","C61F I88R Y121S R127M",4
"lib1","SARS-CoV-2","GAGGCAACCAGTCACG",4,36.04,6.13,-4.64,0.69,1.5,1.1,0.02,">1 nonsynonymous","A67R G86S",2
"lib1","SARS-CoV-2","GAGGCAACGTAGTTGC",1,26.64,9.77,-1,0.05,2.93,1.02,0,">1 nonsynonymous","Y119F S129G K198R",3
"lib1","SARS-CoV-2","GAGGCAAGCAGAAATC",3,14.54,6,-4.76,1.54,3,1.12,0.01,">1 nonsynonymous","F8C A89L F134C K199R",4
"lib1","SARS-CoV-2","GAGGCAAGTAAACTTG",4,20.44,9.09,-1.67,0.36,1.5,1,0.04,">1 nonsynonymous","V20S R136I",2
"lib1","SARS-CoV-2","GAGGCAATACACGAAC",5,25.37,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A81Y F99M E135V",3
"lib1","SARS-CoV-2","GAGGCAATCATATAAT",7,77.36,10.7,-0.06,0.04,2.97,1,0,"1 nonsynonymous","Y50W",1
"lib1","SARS-CoV-2","GAGGCAATGATATCCA",1,8.63,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","L5G V71D G117L C158Q",4
"lib1","SARS-CoV-2","GAGGCAATTAAAGAGG",2,7.03,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","L60M I88K C102W T201K",4
"lib1","SARS-CoV-2","GAGGCAATTATTAAAC",3,57.65,9.99,-0.78,0.13,2.17,1.05,0.01,">1 nonsynonymous","D98T A105V",2
"lib1","SARS-CoV-2","GAGGCACAAACGGAAC",7,23.05,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","D34L Y93S",2
"lib1","SARS-CoV-2","GAGGCACATGTAATGA",1,5.33,6,-4.76,1.67,1.5,1.15,0.02,"1 nonsynonymous","R124T",1
"lib1","SARS-CoV-2","GAGGCACCATAGGATT",1,48.4,7.83,-2.93,0.28,1.5,1.09,0.04,">1 nonsynonymous","V115E Y121T K128L V173Y",4
"lib1","SARS-CoV-2","GAGGCACCGACTCAAA",2,3.85,NA,NA,NA,NA,NA,NA,"stop","L95S N118* R124L",3
"lib1","SARS-CoV-2","GAGGCACCTGATAGTA",8,145.08,9.58,-1.18,0.11,1.62,1.12,0,">1 nonsynonymous","S29C L95C",2
"lib1","SARS-CoV-2","GAGGCACTGCATAGCC",6,0.45,NA,NA,NA,NA,NA,NA,"stop","Y35S S41H C49* I72T Y119I T148Y",6
"lib1","SARS-CoV-2","GAGGCACTGCTCGGAC",9,239.21,10.27,-0.5,0.05,2.93,1.02,0,"1 nonsynonymous","E154P",1
"lib1","SARS-CoV-2","GAGGCAGAAAGCGCCA",2,1.38,NA,NA,NA,NA,NA,NA,"stop","Q168*",1
"lib1","SARS-CoV-2","GAGGCAGCACTTGGTC",6,9.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34T Y91C F99Y A192E",4
"lib1","SARS-CoV-2","GAGGCAGCAGGTATTG",5,60.02,10.06,-0.71,0.08,1.99,1.01,0,">1 nonsynonymous","P82K A192P",2
"lib1","SARS-CoV-2","GAGGCAGTAAAGATAC",5,250.71,10.2,-0.57,0.04,2.81,1,0,">1 nonsynonymous","E135M S139G",2
"lib1","SARS-CoV-2","GAGGCAGTACCCTTCA",1,23.73,10.8,0.04,0.07,2.94,1.02,0,"1 nonsynonymous","V153D",1
"lib1","SARS-CoV-2","GAGGCATATCTCGTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124H Y143P R179T",3
"lib1","SARS-CoV-2","GAGGCATCTGCGGGTT",1,50.98,9.02,-1.74,0.23,1.5,1.13,0.02,">1 nonsynonymous","N30D V103M",2
"lib1","SARS-CoV-2","GAGGCATGACTGAACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAGGCATGCACTGTAC",5,24.54,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N92Y N118S V173S",3
"lib1","SARS-CoV-2","GAGGCATTAAATTAAT",3,40.14,8.89,-1.87,0.18,2.18,1.08,0.02,">1 nonsynonymous","L5G S41Y N157S S184L",4
"lib1","SARS-CoV-2","GAGGCATTGAAGAATT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","C49R N64F Y121* P149S Y178G",5
"lib1","SARS-CoV-2","GAGGCATTTTAATATG",2,14.16,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I80K Y165E V173T",3
"lib1","SARS-CoV-2","GAGGCCAAAAAGGCAA",3,68.98,10.29,-0.47,0.04,2.91,1.02,0,">1 nonsynonymous","G83Q N107P",2
"lib1","SARS-CoV-2","GAGGCCAAAATTTGCT",2,40.98,7.9,-2.87,0.33,1.5,1.16,0.03,">1 nonsynonymous","S43V K56I N109F Y119P",4
"lib1","SARS-CoV-2","GAGGCCAATTATAATA",2,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129G F134I V153Y",3
"lib1","SARS-CoV-2","GAGGCCACCATAAAAT",2,45.29,8.06,-2.7,0.2,1.58,1.13,0.01,">1 nonsynonymous","T85N Y165T",2
"lib1","SARS-CoV-2","GAGGCCACTATTACTA",2,118.16,9.51,-1.26,0.06,2.79,1.07,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","GAGGCCCAACAAATTA",1,57.08,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y35F G83D A89V L95E C158R",5
"lib1","SARS-CoV-2","GAGGCCCAACTTGGCT",3,54.55,6.54,-4.22,0.32,1.5,1.12,0.01,">1 nonsynonymous","S19V T63R Q84S D97V W106E P161Y",6
"lib1","SARS-CoV-2","GAGGCCCAGCAGCAAA",1,0.92,NA,NA,NA,NA,NA,NA,"stop","V11* G101R",2
"lib1","SARS-CoV-2","GAGGCCCGCTAGCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34N T55H Y93*",3
"lib1","SARS-CoV-2","GAGGCCGAACAATCCG",5,28.78,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","C61T Q84I K94L G174T",4
"lib1","SARS-CoV-2","GAGGCCGATGTTTACA",1,67.59,10.19,-0.57,0.06,2.87,1,0,">1 nonsynonymous","D59A V65Q L122S",3
"lib1","SARS-CoV-2","GAGGCCGGTGGCCTCC",4,35.42,6.43,-4.34,0.47,1.5,1.13,0.01,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","GAGGCCTTTTTCATAC",7,154.15,10.84,0.07,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGCGAAAATATTGT",6,38.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10R G116K F134Y L162E",4
"lib1","SARS-CoV-2","GAGGCGAAACCTTAAG",3,1.82,NA,NA,NA,NA,NA,NA,"stop","K94D D98L G152*",3
"lib1","SARS-CoV-2","GAGGCGAACTTTTTAT",10,206.85,10.63,-0.13,0.04,2.87,1.05,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","GAGGCGAATAGGTACG",3,6.11,9.51,-1.26,0.31,1.89,1.08,0.04,">1 nonsynonymous","D34F C61F L183M",3
"lib1","SARS-CoV-2","GAGGCGATATATAATG",4,89.52,10.7,-0.07,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGCGATTCTAGGAA",9,97.34,8.14,-2.62,0.18,1.51,1.19,0.01,">1 nonsynonymous","V65R Y165M A192V",3
"lib1","SARS-CoV-2","GAGGCGCATTCCCCGA",3,38.78,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C31R S45L G117C",3
"lib1","SARS-CoV-2","GAGGCGCGCACTCGGC",1,11.74,6.13,-4.63,0.63,3,1.41,0.01,">1 nonsynonymous","A89Y N118E P133M F167Q",4
"lib1","SARS-CoV-2","GAGGCGTACCAATAAT",3,40.74,8.76,-2.01,0.2,1.5,1.08,0.02,">1 nonsynonymous","L60P D90T S164Y",3
"lib1","SARS-CoV-2","GAGGCTAAAACTCCAA",1,32.8,8.76,-2,0.19,2.03,1.19,0.01,">1 nonsynonymous","C61K W106L Y159H L188F P197R",5
"lib1","SARS-CoV-2","GAGGCTAGAAAGAAAA",5,14.26,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I2W L38I F99T S129C",4
"lib1","SARS-CoV-2","GAGGCTAGGTGGGCTG",7,120.07,10.25,-0.51,0.04,2.84,1.03,0,">1 nonsynonymous","G9C R16Q A190V",3
"lib1","SARS-CoV-2","GAGGCTATTACGGAGT",1,41.95,8.11,-2.66,0.14,2.64,1.14,0.01,">1 nonsynonymous","N157C T201W",2
"lib1","SARS-CoV-2","GAGGCTCCCTATTAGC",1,5.85,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I2P D90S V103H",3
"lib1","SARS-CoV-2","GAGGCTGCATCGTTAT",2,24.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R25F D98T",2
"lib1","SARS-CoV-2","GAGGCTTATGACCCGT",4,2.33,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","GAGGCTTTCCCTATAT",1,74.74,9.97,-0.8,0.05,2.52,1.01,0,">1 nonsynonymous","T85S K87T I104H N120V Q163A",5
"lib1","SARS-CoV-2","GAGGCTTTTAAGATCT",8,43.21,10.45,-0.31,0.15,2.88,1.01,0.01,">1 nonsynonymous","N64R S129H",2
"lib1","SARS-CoV-2","GAGGGAAAAAATAATA",4,2.41,NA,NA,NA,NA,NA,NA,"stop","I2Y C61* D98R P169Y",4
"lib1","SARS-CoV-2","GAGGGAAAACCTAACT",5,40.76,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T63R Y91V D97G Y143P",4
"lib1","SARS-CoV-2","GAGGGAAAACTATGCT",2,8.28,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17H N110P",2
"lib1","SARS-CoV-2","GAGGGAAAGACAAGTA",2,133.35,10.12,-0.65,0.09,2.12,1.03,0,">1 nonsynonymous","I2K G83T Y123W T148I H189N",5
"lib1","SARS-CoV-2","GAGGGAACTGGGAACA",3,11.61,6.07,-4.7,2,3,1.08,0,">1 nonsynonymous","P96Y V181L",2
"lib1","SARS-CoV-2","GAGGGAATACGAAGAG",4,63.33,8.76,-2,0.23,1.5,1.03,0.03,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","GAGGGACATTACGCAA",4,59.48,6,-4.76,1.47,1.5,1.24,0.02,">1 nonsynonymous","V32H D68A",2
"lib1","SARS-CoV-2","GAGGGACGATCAGACT",5,55.38,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G86N L122V Q144T",3
"lib1","SARS-CoV-2","GAGGGACGTGCTCGTT",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R K114S Y143F N157T",4
"lib1","SARS-CoV-2","GAGGGACTGTAACACA",2,70.32,6,-4.76,2,3,1.08,0,">1 nonsynonymous","T63M A145E Q176F",3
"lib1","SARS-CoV-2","GAGGGACTTCACTTCA",2,44.04,10.17,-0.59,0.05,2.96,1,0,"1 nonsynonymous","E154V",1
"lib1","SARS-CoV-2","GAGGGACTTCATAAAC",3,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K K87P I104N P133L Q144E G196P",6
"lib1","SARS-CoV-2","GAGGGAGAATTCAATA",2,42.59,9.85,-0.92,0.1,2.54,1.06,0,">1 nonsynonymous","C31S D97V",2
"lib1","SARS-CoV-2","GAGGGAGACAGTGGAG",3,0.46,NA,NA,NA,NA,NA,NA,"stop","L38P G101H N120* Y143N Y159I",5
"lib1","SARS-CoV-2","GAGGGAGCACAAACGC",2,25.38,10.27,-0.5,0.08,2.93,1.05,0,">1 nonsynonymous","G152V S200R",2
"lib1","SARS-CoV-2","GAGGGAGGATGGCGTG",4,91.76,10.27,-0.49,0.06,2.54,1.04,0,">1 nonsynonymous","P7H T85E D98P S184V",4
"lib1","SARS-CoV-2","GAGGGAGTTCTACAAG",8,50.96,9.41,-1.36,0.16,1.89,1.1,0.01,">1 nonsynonymous","P82V S164G",2
"lib1","SARS-CoV-2","GAGGGATTCAAGACCA",2,10.15,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","S29F L122Y L131K N151G",4
"lib1","SARS-CoV-2","GAGGGCAGATTCACAT",2,11.26,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6M A22T A89F L95E",4
"lib1","SARS-CoV-2","GAGGGCAGGAGCACTA",5,63.39,10.76,0,0.06,2.89,1.07,0,"1 nonsynonymous","R136Q",1
"lib1","SARS-CoV-2","GAGGGCGGACCAGTAA",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H S164A",2
"lib1","SARS-CoV-2","GAGGGCGGGCCACCCA",5,83.97,10.75,-0.01,0.08,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGGCGTTATAATTT",1,33.99,10.48,-0.28,0.07,2.87,1.03,0,"1 nonsynonymous","G116I",1
"lib1","SARS-CoV-2","GAGGGCTAGGCATCGC",8,52.59,10.71,-0.05,0.07,2.96,1.03,0,">1 nonsynonymous","R27Y S36N",2
"lib1","SARS-CoV-2","GAGGGCTTTTGAAGTG",1,18.66,10.09,-0.67,0.17,2.2,1.08,0.01,">1 nonsynonymous","A42N S69N D97Y S200T",4
"lib1","SARS-CoV-2","GAGGGGAAACACTCTT",1,12.28,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","F44L D137R G172D",3
"lib1","SARS-CoV-2","GAGGGGATGCATAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38K T201S",2
"lib1","SARS-CoV-2","GAGGGGCATTTTCGGA",9,172.88,8.26,-2.5,0.15,1.87,1.12,0.01,">1 nonsynonymous","S113H Y119M T201S",3
"lib1","SARS-CoV-2","GAGGGGCTAAATCCTA",3,78.4,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","V20G N30F V77E T85L I104V",5
"lib1","SARS-CoV-2","GAGGGTAAGAAACCTG",3,0.43,NA,NA,NA,NA,NA,NA,"stop","A14N I28* F160W S164Q K198L",5
"lib1","SARS-CoV-2","GAGGGTAAGCTGTCTA",2,89.67,10.77,0.01,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGGGTACGAGGATGC",4,66.93,9.82,-0.95,0.12,2.07,1.08,0.01,">1 nonsynonymous","I138R P161S",2
"lib1","SARS-CoV-2","GAGGGTACGTTCAGAA",4,28.5,7.74,-3.03,0.22,1.5,1.11,0.02,">1 nonsynonymous","K56W N118G Y178V",3
"lib1","SARS-CoV-2","GAGGGTATACCAATCA",2,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R F99S N107L",3
"lib1","SARS-CoV-2","GAGGGTATCACAGGAA",2,12.28,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F12G A33E G86S T100L E141G G174R",6
"lib1","SARS-CoV-2","GAGGGTCTGCAAATAG",8,119.68,10.56,-0.21,0.04,2.95,1,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","GAGGGTTACATAAAAA",6,72.24,9.29,-1.47,0.11,1.72,1.12,0,"1 nonsynonymous","D137Q",1
"lib1","SARS-CoV-2","GAGGGTTAGCCCACGA",2,51.31,9.53,-1.23,0.16,2.16,1.13,0.01,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","GAGGGTTCTGCCCCCT",13,3.41,NA,NA,NA,NA,NA,NA,"stop","P7* Y35Q V103Y S113V E141M",5
"lib1","SARS-CoV-2","GAGGTAAAAAAATTCG",4,16.04,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","E10P D112S R127T G146Y",4
"lib1","SARS-CoV-2","GAGGTAAAAAACTTTC",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F A89L",2
"lib1","SARS-CoV-2","GAGGTAAAAAGGCCCA",3,8.39,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S41L C61V K87C R136A P161L",5
"lib1","SARS-CoV-2","GAGGTAAAATACCTAG",3,0.21,NA,NA,NA,NA,NA,NA,"stop","L57A V180A K198*",3
"lib1","SARS-CoV-2","GAGGTAAAGCAATAGC",5,68.08,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","GAGGTAACGGACAAGG",1,17.38,8.8,-1.96,0.19,2.25,1.1,0.02,">1 nonsynonymous","S36I S113V",2
"lib1","SARS-CoV-2","GAGGTAATTACTGAAA",6,144.05,10.23,-0.53,0.06,2.34,1.02,0,">1 nonsynonymous","V37Q P133D H189F",3
"lib1","SARS-CoV-2","GAGGTACAACAAACTT",8,101.35,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","S43H L60C T148M P161L",4
"lib1","SARS-CoV-2","GAGGTACAGAAGCGGC",1,14.52,10.71,-0.06,0.18,2.73,1.07,0.01,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","GAGGTACATGCATTTA",5,68.22,10.75,-0.02,0.05,2.96,1.02,0,">1 nonsynonymous","T100R K198F",2
"lib1","SARS-CoV-2","GAGGTACCAATTAATT",9,115.75,10.71,-0.06,0.05,2.89,1.05,0,"1 nonsynonymous","I72V",1
"lib1","SARS-CoV-2","GAGGTAGATGCCTTCA",2,33.96,8.27,-2.5,0.42,1.5,1,0.06,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","GAGGTAGCAGCAAACC",4,66.04,6.51,-4.26,0.33,1.5,1.21,0.01,">1 nonsynonymous","K26A P133I G146R",3
"lib1","SARS-CoV-2","GAGGTAGGATCGTAAT",1,10.76,6.42,-4.34,0.49,2.99,1.02,0.03,">1 nonsynonymous","S19P S41W I80R",3
"lib1","SARS-CoV-2","GAGGTAGTGATATCGC",4,94.36,10.21,-0.56,0.12,2.3,1.01,0.01,">1 nonsynonymous","L5S E135G Y178V",3
"lib1","SARS-CoV-2","GAGGTATATCATACTG",4,57.49,9.74,-1.02,0.16,1.87,1.08,0.01,">1 nonsynonymous","A81F C195W",2
"lib1","SARS-CoV-2","GAGGTATCACGTATCA",17,273.28,6.12,-4.64,0.43,1.59,1.16,0.01,">1 nonsynonymous","C150S S184H",2
"lib1","SARS-CoV-2","GAGGTATGGAACTATG",4,53.1,10.74,-0.02,0.08,2.85,1.11,0,">1 nonsynonymous","N1V P197L",2
"lib1","SARS-CoV-2","GAGGTATTACCGAATG",3,41.74,9.6,-1.16,0.16,1.97,1.1,0.01,">1 nonsynonymous","L5P D137Q",2
"lib1","SARS-CoV-2","GAGGTATTGGACTAAG",4,37.76,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y93S Y121S G155Y F167A",4
"lib1","SARS-CoV-2","GAGGTCAGATATAGCC",4,24.02,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","Y50E D90C I138F G166A",4
"lib1","SARS-CoV-2","GAGGTCATACTGACCC",6,1.56,NA,NA,NA,NA,NA,NA,"stop","V77* V103K Q144L Q176S",4
"lib1","SARS-CoV-2","GAGGTCATTTGGCTTG",13,93.86,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T55P V103Y I138S",3
"lib1","SARS-CoV-2","GAGGTCCAGACCTTAA",10,41.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72P A105S",2
"lib1","SARS-CoV-2","GAGGTCCATTCTAATC",5,15.87,8.88,-1.89,0.33,1.5,1,0.06,">1 nonsynonymous","S19K V37Q G51T P197T",4
"lib1","SARS-CoV-2","GAGGTCCTGCTACAAT",2,32.12,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V11P N92C S113N Y121I",4
"lib1","SARS-CoV-2","GAGGTCGAAAAGGCGC",4,29.08,10.17,-0.59,0.13,2.58,1.03,0.01,">1 nonsynonymous","N58Y V77L Q144S",3
"lib1","SARS-CoV-2","GAGGTCGCACTGGATC",3,85.35,8.62,-2.14,0.09,2.34,1.11,0,">1 nonsynonymous","R25H E154Y",2
"lib1","SARS-CoV-2","GAGGTCGGCATGGTGT",5,40.63,10.6,-0.17,0.08,2.94,1.02,0.01,"1 nonsynonymous","S53C",1
"lib1","SARS-CoV-2","GAGGTCTAAAACTTGC",5,39.51,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A67P T85E T100D L122T",4
"lib1","SARS-CoV-2","GAGGTCTAAATAATCG",2,38.57,8.99,-1.77,0.11,2.67,1.15,0.01,">1 nonsynonymous","L5Y L125V P149T P169L",4
"lib1","SARS-CoV-2","GAGGTCTAGGGATTGC",5,31.8,8.68,-2.09,0.11,1.95,1.16,0.01,"1 nonsynonymous","P161M",1
"lib1","SARS-CoV-2","GAGGTCTCCAAGTATA",6,0.13,NA,NA,NA,NA,NA,NA,"stop","D97* N151E",2
"lib1","SARS-CoV-2","GAGGTGAAGAGACACG",2,29,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","V77K K132D N157C",3
"lib1","SARS-CoV-2","GAGGTGAGATATAACT",3,27.25,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N92E T201M",2
"lib1","SARS-CoV-2","GAGGTGATTTGCTAAA",3,61.76,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S36M R127G S139M T148L Q176R",5
"lib1","SARS-CoV-2","GAGGTGGTACCAGGTT",8,146.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68R G86Y T201Y",3
"lib1","SARS-CoV-2","GAGGTGTCTTTAACAA",1,12.82,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A22G S41M K114Y S129L F167P H189S",6
"lib1","SARS-CoV-2","GAGGTGTTTAGATATA",9,131.26,6,-4.76,1.51,1.5,1.13,0,">1 nonsynonymous","G9L N30E Y121V L131W V153T Q168P",6
"lib1","SARS-CoV-2","GAGGTTAACGAATCTT",2,89.17,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37L G166S Y175K",3
"lib1","SARS-CoV-2","GAGGTTACAATACTAT",1,29.9,10.52,-0.25,0.06,2.92,1,0,">1 nonsynonymous","A145V N151F",2
"lib1","SARS-CoV-2","GAGGTTACAATATCCA",5,56.25,10.1,-0.67,0.08,2.78,1.09,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","GAGGTTAGACGTCTGG",9,31.75,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","F17V P54G T63V D97S W106L G174T",6
"lib1","SARS-CoV-2","GAGGTTAGCTAGATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* S19W P54Y",3
"lib1","SARS-CoV-2","GAGGTTCAAATAACCT",2,19.96,10.74,-0.02,0.05,2.88,1.08,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","GAGGTTCACACTATTG",2,0,NA,NA,NA,NA,NA,NA,"stop","W23G V77* Y93R D97Y",4
"lib1","SARS-CoV-2","GAGGTTCAGCAATCAT",1,28.36,10.47,-0.3,0.08,2.91,1.07,0,">1 nonsynonymous","G9R L95V",2
"lib1","SARS-CoV-2","GAGGTTCCATACAGAC",4,10.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C102R Y119P E141S",3
"lib1","SARS-CoV-2","GAGGTTCCGAAGCCTA",1,38.88,10.63,-0.14,0.06,2.93,1.02,0,">1 nonsynonymous","T55P K128A",2
"lib1","SARS-CoV-2","GAGGTTCGACTCGATG",10,2.54,NA,NA,NA,NA,NA,NA,"stop","Y39* T140A",2
"lib1","SARS-CoV-2","GAGGTTCGCATATCAT",4,130.19,10.33,-0.44,0.05,2.91,1.01,0,"1 nonsynonymous","C6D",1
"lib1","SARS-CoV-2","GAGGTTGAAAAATCAA",6,49.54,10.83,0.07,0.07,2.84,1,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","GAGGTTGATCTAATTA",5,539.96,9.73,-1.04,0.1,1.91,1.07,0,">1 nonsynonymous","A89I D98E V153E",3
"lib1","SARS-CoV-2","GAGGTTGCATATGAGC",7,53.62,6,-4.76,2,1.99,1.09,0,">1 nonsynonymous","S69I S113K",2
"lib1","SARS-CoV-2","GAGGTTTACGGGGTGA",3,17.55,NA,NA,NA,NA,NA,NA,"stop","F12* Y35D L38S I88G",4
"lib1","SARS-CoV-2","GAGGTTTTAAATCTTG",5,52.87,10.16,-0.61,0.12,2.41,1.04,0.01,">1 nonsynonymous","D34I S41R",2
"lib1","SARS-CoV-2","GAGTAAAAAAGAGATT",4,35.01,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6Y G86C",2
"lib1","SARS-CoV-2","GAGTAAAAAATGTGTT",4,82.84,10.26,-0.51,0.05,2.85,1.04,0,">1 nonsynonymous","V32G T100R",2
"lib1","SARS-CoV-2","GAGTAAAATATCACTT",3,73.18,10.36,-0.4,0.05,2.93,1,0,">1 nonsynonymous","R16S N40L G196L",3
"lib1","SARS-CoV-2","GAGTAAAATCTACTCA",3,3.45,NA,NA,NA,NA,NA,NA,"stop","R27* F44Y D59K E76K K94I F99L K114S",7
"lib1","SARS-CoV-2","GAGTAAAATTTTGACC",5,63.48,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L5E N64V C102F W106G",4
"lib1","SARS-CoV-2","GAGTAAACTTAACAAA",5,22.11,8.43,-2.34,0.13,2.28,1.15,0.01,">1 nonsynonymous","D34S G155I",2
"lib1","SARS-CoV-2","GAGTAAAGAATCTCCT",10,39.93,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G83E R127M C150M",3
"lib1","SARS-CoV-2","GAGTAAAGCAAATTAC",8,171.18,10.69,-0.07,0.04,2.93,1.03,0,"1 nonsynonymous","A33F",1
"lib1","SARS-CoV-2","GAGTAAAGCACCAACC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAGTAAATAAATTTCG",5,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y P169L",2
"lib1","SARS-CoV-2","GAGTAAATATTGGAAA",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M Y50I R78V",3
"lib1","SARS-CoV-2","GAGTAAATCAGCAATT",4,10.23,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","F62V K87A A105K R136Y C158T",5
"lib1","SARS-CoV-2","GAGTAAATCGACTAAA",2,36.16,8.53,-2.24,0.23,2.2,1.11,0.02,">1 nonsynonymous","Y35W S45T T63N A81Q Y91L N157H",6
"lib1","SARS-CoV-2","GAGTAAATGCAAATAT",1,8.8,10.06,-0.71,0.24,2.25,1,0.02,">1 nonsynonymous","G9E L38R",2
"lib1","SARS-CoV-2","GAGTAAATTAATATGG",3,0,NA,NA,NA,NA,NA,NA,"stop","P7* S45L F126G G174L",4
"lib1","SARS-CoV-2","GAGTAAATTTATAAGT",4,1.74,NA,NA,NA,NA,NA,NA,"stop","N107* P133F",2
"lib1","SARS-CoV-2","GAGTAACATGTTACTT",13,48.65,6.48,-4.28,0.9,1.5,1.3,0.05,">1 nonsynonymous","G86E D98M K128W",3
"lib1","SARS-CoV-2","GAGTAACCCATCCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23L K48G P82* Q176*",4
"lib1","SARS-CoV-2","GAGTAACCCTCTTAAC",1,54.69,9.82,-0.94,0.07,1.97,1.09,0,"1 nonsynonymous","L131A",1
"lib1","SARS-CoV-2","GAGTAACGAAATTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1L L5H E10* D34F S113E P149S T201L",7
"lib1","SARS-CoV-2","GAGTAACGAGCTCGAT",1,34.9,10.18,-0.58,0.06,2.95,1.02,0,">1 nonsynonymous","R73M T148M",2
"lib1","SARS-CoV-2","GAGTAACGCTGAACAT",1,19.72,9.21,-1.56,0.28,1.75,1.19,0.04,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","GAGTAACGCTTAGATC",2,24.13,10.68,-0.08,0.05,2.98,1,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","GAGTAACGCTTTCCGA",7,224.92,10.38,-0.38,0.03,2.91,1.03,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","GAGTAAGACTTTTGTA",2,24.96,8.87,-1.9,0.32,1.5,1,0.06,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","GAGTAAGATTCATCAA",3,18.67,6.38,-4.38,0.65,1.5,1.25,0.02,">1 nonsynonymous","G9W S19R G86A T100V L122M",5
"lib1","SARS-CoV-2","GAGTAAGCCAAATCCA",3,39.82,10.75,-0.01,0.04,3,1,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","GAGTAAGGAGTAAAAG",1,11.26,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","G9A A81Y D90T V103L G172R",5
"lib1","SARS-CoV-2","GAGTAAGGCTATAATA",1,13.51,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V37S N151D F167L V182R",4
"lib1","SARS-CoV-2","GAGTAATAAGAGATCC",6,83.2,10.74,-0.02,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTAATACGCCGTAT",6,4.78,NA,NA,NA,NA,NA,NA,"stop","N1P F8* P54R V77R A105N",5
"lib1","SARS-CoV-2","GAGTAATACTTAAATA",13,264.08,8.69,-2.07,0.07,2.41,1.11,0,">1 nonsynonymous","I72L K87E I138S",3
"lib1","SARS-CoV-2","GAGTAATCCAAATTTA",2,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31Q R136A V180K",3
"lib1","SARS-CoV-2","GAGTAATCTAATCTAA",3,15.27,7.58,-3.19,0.46,1.5,1.21,0.04,">1 nonsynonymous","A14I A81L",2
"lib1","SARS-CoV-2","GAGTAATGAAGTCAAC",1,13.94,6,-4.76,2,3,1.22,0,">1 nonsynonymous","C6I R25I G51K",3
"lib1","SARS-CoV-2","GAGTAATGATGAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* N107*",2
"lib1","SARS-CoV-2","GAGTAATGGCCAATTC",2,1.16,NA,NA,NA,NA,NA,NA,"stop","P96* T170N",2
"lib1","SARS-CoV-2","GAGTAATTAATAGGAA",1,19.96,9.02,-1.74,0.16,2.9,1.04,0.01,"1 nonsynonymous","N118P",1
"lib1","SARS-CoV-2","GAGTAATTAGTTTCCC",12,104.4,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V37S F44D W106C G146F",4
"lib1","SARS-CoV-2","GAGTAATTTGTTAACC",5,1.85,NA,NA,NA,NA,NA,NA,"stop","C61* G116N L162T A190H T201P",5
"lib1","SARS-CoV-2","GAGTACAACGCATATT",4,96.28,9.62,-1.15,0.04,2.95,1.01,0,">1 nonsynonymous","Y119S T201V",2
"lib1","SARS-CoV-2","GAGTACAAGTCAGATG",2,19.68,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","GAGTACACATAGTTAG",5,25.8,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N4R A89D D112A L122A R127M",5
"lib1","SARS-CoV-2","GAGTACACATTGAAAC",2,44.02,10.66,-0.11,0.07,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTACAGCAAAAGGA",2,10.17,6,-4.76,2,3,1.21,0.03,"1 nonsynonymous","D68R",1
"lib1","SARS-CoV-2","GAGTACAGCTAAAATT",2,0.88,NA,NA,NA,NA,NA,NA,"stop","C102* G116P G155L",3
"lib1","SARS-CoV-2","GAGTACAGTATAACGA",12,210.51,8.66,-2.11,0.1,2.74,1.09,0,">1 nonsynonymous","G9S Y143T G174N",3
"lib1","SARS-CoV-2","GAGTACATAAAGGGCA",4,52.07,6.18,-4.59,0.71,1.5,1.17,0.02,">1 nonsynonymous","S69E D75W T148K",3
"lib1","SARS-CoV-2","GAGTACATGTCTGCGC",3,135.15,10.11,-0.65,0.05,2.77,1,0,">1 nonsynonymous","V11L V77L Y91L",3
"lib1","SARS-CoV-2","GAGTACCAAGAACATT",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S S45V K56T S113Q Q168T",5
"lib1","SARS-CoV-2","GAGTACCAGCTAAAGA",13,53.81,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T15C P82T K94Y N107L K199N",5
"lib1","SARS-CoV-2","GAGTACCAGTACTGAA",6,1.24,NA,NA,NA,NA,NA,NA,"stop","F12C N64A Y175*",3
"lib1","SARS-CoV-2","GAGTACCCCGCAATAC",1,66.54,10.47,-0.3,0.04,2.89,1.05,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","GAGTACCCTACTAGCA",7,67.57,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44I Y91M Y123C Q144P",4
"lib1","SARS-CoV-2","GAGTACCTATCATCCT",3,51.88,6,-4.76,1.72,1.5,1.19,0.03,">1 nonsynonymous","D90T R136P",2
"lib1","SARS-CoV-2","GAGTACCTGAATTATA",6,61.69,10.2,-0.57,0.05,2.8,1,0,"1 nonsynonymous","Y93F",1
"lib1","SARS-CoV-2","GAGTACGCCAGTGAAA",2,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L A105G K128N",3
"lib1","SARS-CoV-2","GAGTACGCCCACCACT",1,1.45,NA,NA,NA,NA,NA,NA,"stop","F44L P133* F160N",3
"lib1","SARS-CoV-2","GAGTACGGTGCGCTTA",1,31.35,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","W23A I88S N107C Q168K",4
"lib1","SARS-CoV-2","GAGTACTAAACGGACT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","R16T F47*",2
"lib1","SARS-CoV-2","GAGTACTATTTTACCC",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y L60S L122V N130A N157H S184Y",6
"lib1","SARS-CoV-2","GAGTACTGCAACCAGC",2,67.63,10.57,-0.2,0.04,2.96,1.02,0,">1 nonsynonymous","T3K P149V",2
"lib1","SARS-CoV-2","GAGTACTTAGCAACAG",9,40.29,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A14N F44T G86K V103N",4
"lib1","SARS-CoV-2","GAGTACTTGCAGTAGT",1,24.1,9.9,-0.86,0.09,2.75,1.03,0,">1 nonsynonymous","G9L D34P L122F",3
"lib1","SARS-CoV-2","GAGTAGAAAAAACCGA",1,39.06,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S36K R136D G152A",3
"lib1","SARS-CoV-2","GAGTAGAAACTATTGC",4,127.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55M S69V G86V Y93D N107D K114V Y121M R136L N157M",9
"lib1","SARS-CoV-2","GAGTAGAAAGCAATGG",9,185.49,8.63,-2.14,0.15,1.94,1.13,0.01,">1 nonsynonymous","E10L G74M",2
"lib1","SARS-CoV-2","GAGTAGAATGAGCACG",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A A105L D112H N130V E154Y L162M T201S",7
"lib1","SARS-CoV-2","GAGTAGACAGTAATTG",5,28.81,7.8,-2.97,0.36,1.5,1.13,0.05,">1 nonsynonymous","E76A E135K",2
"lib1","SARS-CoV-2","GAGTAGACTGATAGGT",8,85.31,10.65,-0.11,0.05,2.9,1.05,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","GAGTAGAGGCCCTAGC",4,108.85,10.19,-0.57,0.05,2.88,1.02,0,">1 nonsynonymous","D97C Y121L V173L",3
"lib1","SARS-CoV-2","GAGTAGATGAATATAA",1,5.91,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","GAGTAGCAACAAAAAT",5,47.9,10.54,-0.23,0.19,2.82,1.03,0.03,">1 nonsynonymous","A42W A105S",2
"lib1","SARS-CoV-2","GAGTAGCACTTGAGGG",1,0.61,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","GAGTAGCAGTGTGAGC",7,1.54,NA,NA,NA,NA,NA,NA,"stop","K48* S184A",2
"lib1","SARS-CoV-2","GAGTAGCATGCCCCAG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","V37* G86I K128L L183P",4
"lib1","SARS-CoV-2","GAGTAGCATTTCAGAA",5,43.08,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C6L W23G R73V T140Y Q176Y",5
"lib1","SARS-CoV-2","GAGTAGCCACGAGCCA",3,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S L95D G116I G146L",4
"lib1","SARS-CoV-2","GAGTAGCTGATGGAAA",8,29,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","S147L G152W Q168P T201I",4
"lib1","SARS-CoV-2","GAGTAGGATTACACGC",6,63.69,9.45,-1.31,0.09,2.5,1.11,0,">1 nonsynonymous","N58M N107K",2
"lib1","SARS-CoV-2","GAGTAGGCCGCACTAC",1,0.22,NA,NA,NA,NA,NA,NA,"stop","W23A Y119C F167P Y175S K198*",5
"lib1","SARS-CoV-2","GAGTAGGGCAACCATC",5,183.39,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S41L I88R R124V Q176S",4
"lib1","SARS-CoV-2","GAGTAGGTAAATGAGA",14,124.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S P96S N120V R127K",4
"lib1","SARS-CoV-2","GAGTAGTCTAACAAAT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","S19* F44A G51M G117V N130D",5
"lib1","SARS-CoV-2","GAGTAGTCTGATTATG",2,11.71,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","G9R T15D G83A S139L G155V",5
"lib1","SARS-CoV-2","GAGTATAAAACCTGTA",4,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19V D34L S41I Q84I K132Q V181S",6
"lib1","SARS-CoV-2","GAGTATAACTCGCGAT",2,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GAGTATAAGATACATT",5,70.24,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S69V A81R Q84L Y121N R127T",5
"lib1","SARS-CoV-2","GAGTATAAGTTGTCAA",1,24.41,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","GAGTATAATAAATCCG",1,6.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41Q V103K G146A",3
"lib1","SARS-CoV-2","GAGTATACGTCATCAT",11,110.69,10.46,-0.31,0.04,2.86,1.07,0,">1 nonsynonymous","S43F G152M Y178F S200V",4
"lib1","SARS-CoV-2","GAGTATAGGTGCTCGG",2,31.58,10.75,-0.01,0.07,2.98,1,0,"1 nonsynonymous","V115N",1
"lib1","SARS-CoV-2","GAGTATATGCCGCTGA",1,19.37,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F99R Y121M E141N",3
"lib1","SARS-CoV-2","GAGTATATTTAGTTCG",2,49.7,9.34,-1.43,0.1,2.79,1.11,0,">1 nonsynonymous","S45T I142S",2
"lib1","SARS-CoV-2","GAGTATCAATATACCT",5,1.91,NA,NA,NA,NA,NA,NA,"stop","I28R T63R L95A L122* Y175F Q176H",6
"lib1","SARS-CoV-2","GAGTATCACTCCTCGT",1,23.59,8.69,-2.08,0.13,2.65,1.04,0.01,">1 nonsynonymous","A81G N157A T201S",3
"lib1","SARS-CoV-2","GAGTATCGAAAAACAA",7,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28Y Y93F N107P",3
"lib1","SARS-CoV-2","GAGTATGAGAGAAAAC",2,21.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W F12R L60H Y178V L188Q",5
"lib1","SARS-CoV-2","GAGTATGCGTTGCCGT",1,38.31,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S36L K94T Y143A",3
"lib1","SARS-CoV-2","GAGTATGGCGGCACTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I V37F N110M N120F S129N F167L",6
"lib1","SARS-CoV-2","GAGTATGTACTATATT",6,141.8,10.76,-0.01,0.05,2.92,1.03,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","GAGTATGTGGCTAAGT",1,5.1,10.08,-0.68,0.07,2.93,1,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","GAGTATTAAAAAAAAG",7,143.39,10.02,-0.75,0.13,1.93,1.08,0.01,">1 nonsynonymous","L5N S36I F44L",3
"lib1","SARS-CoV-2","GAGTATTCAAAGCTAT",4,49.08,10.1,-0.66,0.08,2.81,1.06,0,">1 nonsynonymous","A145G G174R",2
"lib1","SARS-CoV-2","GAGTATTCGCGTACTA",3,31.9,10.92,0.15,0.1,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGTATTGTACTTAAG",16,24.17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G86W N130M V181R",3
"lib1","SARS-CoV-2","GAGTATTTAAGAAAGC",4,27.08,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V71H P161F",2
"lib1","SARS-CoV-2","GAGTATTTAGCTGACG",1,36.39,10.15,-0.61,0.05,2.95,1,0,">1 nonsynonymous","P149R F156S",2
"lib1","SARS-CoV-2","GAGTATTTGCAGGACA",3,22.71,6.29,-4.48,0.53,1.5,1.13,0.02,">1 nonsynonymous","G9V Y21K V32S L162S Y178S",5
"lib1","SARS-CoV-2","GAGTCAAAAGGTGCCG",3,66.63,8.68,-2.09,0.13,1.76,1.1,0.01,">1 nonsynonymous","N118L K128Y I138N",3
"lib1","SARS-CoV-2","GAGTCAAAGTAGAGAG",3,37.27,10.45,-0.31,0.13,2.68,1.11,0.01,">1 nonsynonymous","T55P N130M",2
"lib1","SARS-CoV-2","GAGTCAAATTCAACCC",13,131.99,9.94,-0.82,0.11,2.23,1.02,0,">1 nonsynonymous","F99L P149G",2
"lib1","SARS-CoV-2","GAGTCAACCCAATATG",2,82.97,10.77,0.01,0.07,2.93,1.04,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","GAGTCAAGAGTACACC",1,18.77,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","A33S F167D",2
"lib1","SARS-CoV-2","GAGTCAAGATATGGCG",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48I Y93S N120R E186L",4
"lib1","SARS-CoV-2","GAGTCAAGCAAGAAAG",5,55.32,9.83,-0.93,0.09,1.92,1.07,0,">1 nonsynonymous","N13I I138L",2
"lib1","SARS-CoV-2","GAGTCAATGAACTCTA",7,66.57,8.47,-2.3,0.16,1.81,1.15,0.01,">1 nonsynonymous","A14L Y35W Y121T",3
"lib1","SARS-CoV-2","GAGTCACAAACATAAC",3,46.64,8.48,-2.29,0.28,1.5,1.13,0.03,">1 nonsynonymous","I72S K199R",2
"lib1","SARS-CoV-2","GAGTCACAATCCAGCA",11,86.5,10.33,-0.43,0.04,2.86,1.04,0,"1 nonsynonymous","Y91I",1
"lib1","SARS-CoV-2","GAGTCACCTGAAATAA",3,51.22,10.4,-0.37,0.05,2.88,1.07,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","GAGTCACTATATAACA",4,15.13,6.97,-3.79,0.6,1.5,1,0.05,">1 nonsynonymous","V37G F99T I104Y E141P",4
"lib1","SARS-CoV-2","GAGTCACTTATCACCG",4,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T I80E V103W S200R",4
"lib1","SARS-CoV-2","GAGTCAGACGAAGATT",2,45.77,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","C102W R124C",2
"lib1","SARS-CoV-2","GAGTCAGCACACTAAT",1,15.11,9.72,-1.05,0.1,2.83,1.06,0,">1 nonsynonymous","T15N C61L F156P L188P",4
"lib1","SARS-CoV-2","GAGTCAGCAGAAAATA",6,51.61,6.39,-4.38,0.41,1.5,1.09,0.01,">1 nonsynonymous","I2A C61F N110S G152R G172R",5
"lib1","SARS-CoV-2","GAGTCAGCCAAAAAAA",1,37.51,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I2Y G86Q T100S T148G",4
"lib1","SARS-CoV-2","GAGTCAGCCTGCCACA",3,5.78,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","I2F A14L Y91N F99P P149S T201Q",6
"lib1","SARS-CoV-2","GAGTCAGCTTTTAAAG",3,23.91,8.34,-2.42,0.42,2.08,1.24,0.06,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","GAGTCAGGGCCTCAAA",1,25.22,10.25,-0.51,0.07,2.89,1,0,">1 nonsynonymous","S41R G155M",2
"lib1","SARS-CoV-2","GAGTCAGTCTCCAAAT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","K114* Q163D T201L",3
"lib1","SARS-CoV-2","GAGTCATAAACATACG",3,69.19,10.24,-0.53,0.06,2.79,1,0,">1 nonsynonymous","T15A A89S",2
"lib1","SARS-CoV-2","GAGTCATAGGAAGCTA",13,93.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35S A67S R73E",3
"lib1","SARS-CoV-2","GAGTCATATGAAAAAG",2,69.87,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A67V Y93E K199N",3
"lib1","SARS-CoV-2","GAGTCATCTGAAAAGG",3,50.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141S P149L R179T",3
"lib1","SARS-CoV-2","GAGTCCAAGAACTCCA",16,162.61,8.89,-1.87,0.18,1.5,1.05,0.01,">1 nonsynonymous","I2V R25M",2
"lib1","SARS-CoV-2","GAGTCCACAAAATATA",5,34.04,10.47,-0.29,0.05,2.97,1,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","GAGTCCACACCACTTG",2,44.2,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A33L G101V P161S",3
"lib1","SARS-CoV-2","GAGTCCACATAGTCCA",1,7.23,7.26,-3.5,0.58,2.03,1.09,0.06,">1 nonsynonymous","S45A D112S L122W",3
"lib1","SARS-CoV-2","GAGTCCACTGAGAAGC",15,409.66,8.64,-2.12,0.09,2.91,1.05,0,"1 nonsynonymous","N157M",1
"lib1","SARS-CoV-2","GAGTCCATGTTATAAC",5,28.14,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y91M C150F Y159P",3
"lib1","SARS-CoV-2","GAGTCCGAAAAGATAG",2,40.16,10.59,-0.17,0.08,2.86,1.03,0,">1 nonsynonymous","K56M N120M P149N Y178F",4
"lib1","SARS-CoV-2","GAGTCCGGTTAAAGTG",1,10.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R D97F W106R K114R K132L",5
"lib1","SARS-CoV-2","GAGTCCGTATCTGACA",6,74.09,10.54,-0.22,0.05,2.92,1.03,0,"1 nonsynonymous","I138P",1
"lib1","SARS-CoV-2","GAGTCCGTCACAGTCT",7,113.21,6.25,-4.51,0.47,1.5,1.16,0.01,">1 nonsynonymous","S19Q R73M Y119Q",3
"lib1","SARS-CoV-2","GAGTCCTATATAACGA",5,68.75,10.8,0.04,0.06,2.95,1.02,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","GAGTCCTCCATCATTA",5,68.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S W106A Y119S G166L Q176R",5
"lib1","SARS-CoV-2","GAGTCCTTAGCGCCCA",1,7,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A14S Y91F C150V",3
"lib1","SARS-CoV-2","GAGTCCTTATCCATGC",5,37.29,10.84,0.08,0.09,2.87,1.01,0,"1 nonsynonymous","T100K",1
"lib1","SARS-CoV-2","GAGTCCTTCAGAACTA",11,150.88,9.96,-0.8,0.11,2.16,1.01,0,">1 nonsynonymous","N4D W106L",2
"lib1","SARS-CoV-2","GAGTCGAAATCATAGG",2,6.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P R16Q S69G A89G P96D S113T",6
"lib1","SARS-CoV-2","GAGTCGAACGCTATCG",7,163.1,10.66,-0.1,0.03,2.91,1.03,0,">1 nonsynonymous","N1R A18G I138V",3
"lib1","SARS-CoV-2","GAGTCGATACCGATCA",2,11.64,10.88,0.11,0.1,2.85,1.03,0,">1 nonsynonymous","G9V S200I",2
"lib1","SARS-CoV-2","GAGTCGCACCACAATT",1,24.12,10.21,-0.56,0.08,2.71,1.02,0,">1 nonsynonymous","D98C I104L P149H",3
"lib1","SARS-CoV-2","GAGTCGCAGTAATTTA",2,193.39,9.54,-1.23,0.09,2.68,1.09,0,">1 nonsynonymous","I2F A22E Q176H",3
"lib1","SARS-CoV-2","GAGTCGCCCAATGTCC",2,81.38,10.47,-0.29,0.05,2.89,1.06,0,">1 nonsynonymous","A42S V65L",2
"lib1","SARS-CoV-2","GAGTCGCTCAGTTTTA",2,0.8,NA,NA,NA,NA,NA,NA,"stop","I28* F44N G51C T63D T85P",5
"lib1","SARS-CoV-2","GAGTCGGCAACTTGCA",2,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S N58I G166R Q176W",4
"lib1","SARS-CoV-2","GAGTCTAAAAGGCCAC",8,200.59,10.56,-0.21,0.03,2.94,1.01,0,"1 nonsynonymous","F8I",1
"lib1","SARS-CoV-2","GAGTCTAAGACAATTT",3,23.59,10.64,-0.13,0.11,2.93,1,0,"1 nonsynonymous","K94H",1
"lib1","SARS-CoV-2","GAGTCTAATAAAAATA",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V I80W T85R",3
"lib1","SARS-CoV-2","GAGTCTAATACAACGC",1,11.83,7.22,-3.54,0.32,1.5,1.09,0.04,">1 nonsynonymous","A33L D59M Q144L P169V",4
"lib1","SARS-CoV-2","GAGTCTACAAAAGGCC",7,98.74,6.81,-3.96,0.39,1.5,1.2,0.03,">1 nonsynonymous","F99T K199T",2
"lib1","SARS-CoV-2","GAGTCTACTACGATCA",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71C Y93S P149Q P161D",4
"lib1","SARS-CoV-2","GAGTCTAGAACAGTTG",1,22.95,10.64,-0.13,0.09,2.91,1.08,0.01,">1 nonsynonymous","L5A A33W T85P",3
"lib1","SARS-CoV-2","GAGTCTAGTCAGACAC",11,123.68,8.68,-2.08,0.09,2.76,1.05,0,">1 nonsynonymous","P7E R16V L57G Y119D Q144A",5
"lib1","SARS-CoV-2","GAGTCTATAATATTAA",2,5.29,6.02,-4.75,2,3,1.09,0.01,">1 nonsynonymous","A14R D90E P96N G152C",4
"lib1","SARS-CoV-2","GAGTCTATATGATTGA",1,8.76,NA,NA,NA,NA,NA,NA,"stop","Y50S L57S V71L G116S G155*",5
"lib1","SARS-CoV-2","GAGTCTATGAATACCA",11,181.69,10.02,-0.74,0.07,2.19,1.02,0,">1 nonsynonymous","R16S T55F L60A N107G",4
"lib1","SARS-CoV-2","GAGTCTCACGCCAGGA",1,26.91,10.74,-0.02,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTCTCTGATATCTG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","C49F P82L I88Y L95M E154* V181L",6
"lib1","SARS-CoV-2","GAGTCTCTTTAAATTA",9,1.15,NA,NA,NA,NA,NA,NA,"stop","G51F N58D Y93P S108N F134* G174W",6
"lib1","SARS-CoV-2","GAGTCTGAAAGACCAT",3,58.46,10.11,-0.65,0.1,2.65,1.08,0,">1 nonsynonymous","D59G A81C",2
"lib1","SARS-CoV-2","GAGTCTGAGAAAACTA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K A105D S113P",3
"lib1","SARS-CoV-2","GAGTCTGCCCAGCCTC",6,80.49,6.11,-4.66,0.7,1.5,1.19,0.02,">1 nonsynonymous","N130L G172K",2
"lib1","SARS-CoV-2","GAGTCTGTATATATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12N F44C K56Y S113* T148R",5
"lib1","SARS-CoV-2","GAGTCTTAATACACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44V K56* D97V R127A",4
"lib1","SARS-CoV-2","GAGTCTTTCTAGTAAT",3,98.79,9.61,-1.16,0.07,2.86,1.08,0,">1 nonsynonymous","Y119S S200M",2
"lib1","SARS-CoV-2","GAGTGAAACTTGAATG",1,1.19,NA,NA,NA,NA,NA,NA,"stop","R136W A145* P161F G196W",4
"lib1","SARS-CoV-2","GAGTGAAATCTGACTA",1,32.19,10.13,-0.63,0.07,2.94,1,0,">1 nonsynonymous","L125A E135K",2
"lib1","SARS-CoV-2","GAGTGAACCAATTTCA",2,6.51,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G83V G86L R127K",3
"lib1","SARS-CoV-2","GAGTGAACGTATATCC",2,54.82,6,-4.76,1.12,1.5,1.2,0.02,">1 nonsynonymous","G9K D59Y Y66W I72L Q84P Y119L",6
"lib1","SARS-CoV-2","GAGTGAACTTTACCAA",3,55.76,10.74,-0.02,0.04,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTGAAGATCATGTG",1,41.05,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T85M G116Y C158R",3
"lib1","SARS-CoV-2","GAGTGAAGCCGGTGCA",6,110.5,10.74,-0.02,0.07,2.94,1.04,0,">1 nonsynonymous","G9M Y35M L122S",3
"lib1","SARS-CoV-2","GAGTGAAGTGCTACAA",13,164.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T63A E135P",2
"lib1","SARS-CoV-2","GAGTGAAGTTGGTAAC",6,100.69,10.58,-0.18,0.05,2.86,1.09,0,">1 nonsynonymous","T55K Y121Q",2
"lib1","SARS-CoV-2","GAGTGAATAAAACAAT",3,123.6,10.16,-0.6,0.04,2.94,1.02,0,"1 nonsynonymous","G174E",1
"lib1","SARS-CoV-2","GAGTGACAGTATCGGC",2,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T A105V V181P",3
"lib1","SARS-CoV-2","GAGTGACCATACGCAA",6,0.26,NA,NA,NA,NA,NA,NA,"stop","K56T C61* E186G A190L",4
"lib1","SARS-CoV-2","GAGTGACTAGCAAAAA",2,49.8,10.83,0.07,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTGAGTTTGTTCCG",1,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75M D90A D97S",3
"lib1","SARS-CoV-2","GAGTGATACGGTTAAC",1,11.45,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R27E K48H A67R Y119K L162S V180C",6
"lib1","SARS-CoV-2","GAGTGATGAATCCAAA",2,42.84,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V20M L125P Y165A A192L",4
"lib1","SARS-CoV-2","GAGTGATTAACCTGAC",4,15.55,9.56,-1.21,0.25,1.5,1.22,0.03,">1 nonsynonymous","E10K P96H N110L",3
"lib1","SARS-CoV-2","GAGTGATTATCGGTCT",5,14.7,9.71,-1.05,0.1,2.05,1.05,0,">1 nonsynonymous","L38T G196T",2
"lib1","SARS-CoV-2","GAGTGATTGCGCGTCA",6,59.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P149K C158I S184R",3
"lib1","SARS-CoV-2","GAGTGATTGTAAAGGA",1,57.76,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V77K K87C N157V",3
"lib1","SARS-CoV-2","GAGTGATTTTTGATCT",5,1.95,NA,NA,NA,NA,NA,NA,"stop","R78H A89* L187K",3
"lib1","SARS-CoV-2","GAGTGCAGTCTTTGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56R N107T P149L G172* K198L",5
"lib1","SARS-CoV-2","GAGTGCATACACTACA",4,60.31,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I80M C102P G146I Y178M",4
"lib1","SARS-CoV-2","GAGTGCATACCTTTAC",4,110.57,10.12,-0.64,0.07,2.35,1.04,0,">1 nonsynonymous","L122I R136S",2
"lib1","SARS-CoV-2","GAGTGCATGATGAATC",3,73.31,10.63,-0.13,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTGCATTATATGTT",2,10.46,10.61,-0.15,0.08,2.79,1.12,0,">1 nonsynonymous","I2G R136K P149K",3
"lib1","SARS-CoV-2","GAGTGCATTTGCGACT",2,19.08,10.18,-0.59,0.19,2.52,1.09,0.01,">1 nonsynonymous","F8L K114D",2
"lib1","SARS-CoV-2","GAGTGCCAACACGCCG",1,9.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49R A105V N109T G117Y N157L Y178F",6
"lib1","SARS-CoV-2","GAGTGCCATCGGAGAT",10,117.08,9.57,-1.19,0.14,1.81,1.12,0.01,">1 nonsynonymous","S36W D59V K128W",3
"lib1","SARS-CoV-2","GAGTGCGACAGCGGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5E S45L A105D E135I V153*",5
"lib1","SARS-CoV-2","GAGTGCGTGGAACGTT",3,31.56,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R25L D90S F156D",3
"lib1","SARS-CoV-2","GAGTGCTAATTCCCGT",2,36.66,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","T63F Y123Q P169R V173I Y178L",5
"lib1","SARS-CoV-2","GAGTGCTACCTCCGGA",1,5.91,10.4,-0.37,0.18,2.82,1.02,0,">1 nonsynonymous","I2S C61Y P133S",3
"lib1","SARS-CoV-2","GAGTGGAAGTTCACGA",12,2.72,NA,NA,NA,NA,NA,NA,"stop","N1* Y35* P54L N64I C150R N171V",6
"lib1","SARS-CoV-2","GAGTGGACCTCAAGGT",3,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R S113R R136F P161L",4
"lib1","SARS-CoV-2","GAGTGGAGAATCATTA",1,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K P54G T85V",3
"lib1","SARS-CoV-2","GAGTGGCCACAATACC",2,29.39,7.18,-3.58,0.37,1.5,1.03,0.04,">1 nonsynonymous","N4C F47L N107H Y123S R136C F156L Q163E",7
"lib1","SARS-CoV-2","GAGTGGCTCTATGTGG",2,10.72,6.53,-4.24,0.48,1.5,1.11,0.02,">1 nonsynonymous","N4P D90I T170L",3
"lib1","SARS-CoV-2","GAGTGGCTGGGTAGCT",6,0.26,NA,NA,NA,NA,NA,NA,"stop","S19* F44V",2
"lib1","SARS-CoV-2","GAGTGGCTTCTCGCTA",2,47.81,10.21,-0.56,0.09,2.71,1,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","GAGTGGGAAAAAAGAA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R F126H",2
"lib1","SARS-CoV-2","GAGTGGGAGGAAGCGT",6,7.26,NA,NA,NA,NA,NA,NA,"stop","A14G V37* F47Y D90N",4
"lib1","SARS-CoV-2","GAGTGGGTAAAGCGGA",6,100.91,8.41,-2.36,0.38,1.5,1,0.06,">1 nonsynonymous","N13P A33L I80T N151W",4
"lib1","SARS-CoV-2","GAGTGGGTATTGGTAA",5,5.31,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13K W106L V180A",3
"lib1","SARS-CoV-2","GAGTGGTAAAAAGAAA",1,5.02,9.08,-1.68,0.25,2.55,1.43,0.01,"1 nonsynonymous","K198P",1
"lib1","SARS-CoV-2","GAGTGGTCTAAGTTAG",3,27.04,10.1,-0.67,0.11,2.76,1,0.01,">1 nonsynonymous","A81T G196S",2
"lib1","SARS-CoV-2","GAGTGGTGATCAGATA",2,16.09,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N92H Y119D",2
"lib1","SARS-CoV-2","GAGTGTAAACTGGTTC",5,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P V77L Y93M",3
"lib1","SARS-CoV-2","GAGTGTCAGAGGTGAT",1,7.61,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6N E141Y P161L S184H",4
"lib1","SARS-CoV-2","GAGTGTCTATGTACCT",6,53.09,8.74,-2.02,0.13,2.81,1.11,0.01,">1 nonsynonymous","Y121P F156R",2
"lib1","SARS-CoV-2","GAGTGTGGCCGAGGGA",1,77.16,10.71,-0.05,0.07,2.89,1.04,0,"1 nonsynonymous","L162V",1
"lib1","SARS-CoV-2","GAGTGTTAAAAATAAT",7,1.02,NA,NA,NA,NA,NA,NA,"stop","G86* D97M",2
"lib1","SARS-CoV-2","GAGTGTTAACCCAAAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","V77K L162F L183*",3
"lib1","SARS-CoV-2","GAGTGTTATTACCCTT",2,84.48,10.82,0.06,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTGTTCACACAGAA",7,6.72,NA,NA,NA,NA,NA,NA,"stop","S19H G83C N92S Y121M T170*",5
"lib1","SARS-CoV-2","GAGTGTTGAATACACT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","F12P A42N D68*",3
"lib1","SARS-CoV-2","GAGTGTTGGGAGTAGG",1,16.93,10.83,0.07,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTGTTTGCCCCCAA",7,107.45,8.69,-2.08,0.09,2.8,1.1,0,">1 nonsynonymous","I2G G117P E141R",3
"lib1","SARS-CoV-2","GAGTTAAAAGCCACTG",2,15.47,6.07,-4.7,1.07,1.5,1.18,0.03,">1 nonsynonymous","P7L A33S I80G T85A N107S G166L G174A S200F",8
"lib1","SARS-CoV-2","GAGTTAACAGATCAAT",4,2.99,NA,NA,NA,NA,NA,NA,"stop","K56N G86H D137* F160K",4
"lib1","SARS-CoV-2","GAGTTAAGGGTAAAAT",6,61.2,11.02,0.25,0.1,2.95,1,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GAGTTAAGTTCTGGAC",2,26.64,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V37K C61G K114G Y175S",4
"lib1","SARS-CoV-2","GAGTTAATCAATGGAT",6,19.61,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I2L E10S S29L G86Y D98L S129V E141K",7
"lib1","SARS-CoV-2","GAGTTAATCTATACAT",7,58.51,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9E P82S A89N Q144F",4
"lib1","SARS-CoV-2","GAGTTAATGAGTCCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* Y91L",2
"lib1","SARS-CoV-2","GAGTTACCCGCACCGC",4,57.21,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6V S36A T63S G146K N157M",5
"lib1","SARS-CoV-2","GAGTTACCGACTGTAA",9,52.04,9.75,-1.01,0.11,1.82,1.11,0,">1 nonsynonymous","F99H F160H V173F",3
"lib1","SARS-CoV-2","GAGTTACGCTAGCCAT",5,86.05,9.67,-1.1,0.12,1.89,1.08,0.01,">1 nonsynonymous","G9S I28R",2
"lib1","SARS-CoV-2","GAGTTACGCTGAAGTC",2,33.85,10.81,0.04,0.1,2.94,1.05,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","GAGTTACTAAAAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* Y50E L122W F160H P197E",5
"lib1","SARS-CoV-2","GAGTTACTCGCCAACT",1,5.64,7.76,-3.01,0.54,1.5,1,0.05,">1 nonsynonymous","K87P Y93C R127H N157F",4
"lib1","SARS-CoV-2","GAGTTACTTAATAACG",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N T201M",2
"lib1","SARS-CoV-2","GAGTTACTTGCTAACT",6,75.37,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","V20S P177S",2
"lib1","SARS-CoV-2","GAGTTAGAAACGTAAC",4,34.4,10.78,0.02,0.07,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTTAGAAAGTACTG",1,41.09,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A89L Y121S A190L",3
"lib1","SARS-CoV-2","GAGTTAGAATAATGGG",5,5.54,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","F44K P82S V103R L122K",4
"lib1","SARS-CoV-2","GAGTTAGAATAGGGCA",1,2.32,NA,NA,NA,NA,NA,NA,"stop","K26T G51* C195L",3
"lib1","SARS-CoV-2","GAGTTAGACTGAAGCC",8,96.43,6.05,-4.71,0.94,1.5,1.22,0.02,">1 nonsynonymous","C6K Y143T T201I",3
"lib1","SARS-CoV-2","GAGTTAGAGGGCACGT",6,10.69,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C6I Y35Q D75P G174S",4
"lib1","SARS-CoV-2","GAGTTAGATGTTAAGC",4,40.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R R127L I138A",3
"lib1","SARS-CoV-2","GAGTTAGCAAATATTT",1,9.3,9.63,-1.13,0.28,1.66,1.18,0.04,">1 nonsynonymous","R78Y V182S",2
"lib1","SARS-CoV-2","GAGTTAGCACGACATT",3,10.16,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","S43L N64R G86L W106S F156R",5
"lib1","SARS-CoV-2","GAGTTAGTAAAAGAAG",9,65.78,9.43,-1.33,0.14,2.33,1.13,0.01,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","GAGTTATAGCTCGAAC",6,67.47,9.05,-1.71,0.1,2.71,1.12,0.01,">1 nonsynonymous","A14D Y119N",2
"lib1","SARS-CoV-2","GAGTTATCAAACCACA",2,30.46,7.79,-2.97,0.16,2.16,1.16,0.01,">1 nonsynonymous","K56S V115H Y159A",3
"lib1","SARS-CoV-2","GAGTTATCCGATGAAG",1,64.67,7.43,-3.34,0.27,1.5,1.13,0.02,">1 nonsynonymous","A105M G166Q G174T",3
"lib1","SARS-CoV-2","GAGTTATCTTCTAGAC",8,60.63,10.6,-0.16,0.04,2.86,1.02,0,">1 nonsynonymous","N64C Y91N",2
"lib1","SARS-CoV-2","GAGTTATTAAATCATC",3,35.81,10.52,-0.25,0.06,2.92,1.03,0,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","GAGTTATTGCGCATAG",1,6.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E N40M I104W R124Q P169T",5
"lib1","SARS-CoV-2","GAGTTATTTACCGGAA",1,15.62,8.63,-2.14,0.2,1.5,1.03,0.01,">1 nonsynonymous","L38P N107G",2
"lib1","SARS-CoV-2","GAGTTCAAGCTCCCAA",9,90.13,6.5,-4.26,0.54,1.5,1.27,0.03,">1 nonsynonymous","W23S V77M",2
"lib1","SARS-CoV-2","GAGTTCAAGCTTTCCT",2,31.7,10.31,-0.46,0.08,2.81,1.14,0,"1 nonsynonymous","I142H",1
"lib1","SARS-CoV-2","GAGTTCAAGGCAAAAT",14,199.29,8.76,-2.01,0.14,1.66,1.13,0.01,">1 nonsynonymous","F8S G155T",2
"lib1","SARS-CoV-2","GAGTTCAATAGTGCCC",4,94.83,10.78,0.01,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTTCACACAATTTA",3,289.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A22S A42W G116M V153G G172S Q176P",6
"lib1","SARS-CoV-2","GAGTTCACAGTCCGCA",3,36.62,10.77,0.01,0.04,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GAGTTCAGAGAGGATT",8,186.48,9.65,-1.11,0.05,2.86,1.05,0,">1 nonsynonymous","S53N G116C K132L",3
"lib1","SARS-CoV-2","GAGTTCATTTCAAAGA",8,2.15,NA,NA,NA,NA,NA,NA,"stop","N4F P96T Q176*",3
"lib1","SARS-CoV-2","GAGTTCCAAAATACGC",3,35.25,8.94,-1.82,0.14,1.96,1.11,0.01,">1 nonsynonymous","C6Y Y35A G83Y",3
"lib1","SARS-CoV-2","GAGTTCCCCTCTTAGC",4,10.63,8.66,-2.1,0.27,1.5,1,0.04,">1 nonsynonymous","L5M S45F F62V G86S Q163F",5
"lib1","SARS-CoV-2","GAGTTCCTGCCCGGAG",1,20.4,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35N Y50K",2
"lib1","SARS-CoV-2","GAGTTCGACTTAAGAG",4,0.94,NA,NA,NA,NA,NA,NA,"stop","A42S F47T T55P Y123L F134* E141Q",6
"lib1","SARS-CoV-2","GAGTTCTGGACGCTCA",2,146.8,7.89,-2.87,0.17,2.12,1.13,0.01,">1 nonsynonymous","L5R N157H T170H",3
"lib1","SARS-CoV-2","GAGTTCTTACAAATTC",2,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42E K56E R73P N107R",4
"lib1","SARS-CoV-2","GAGTTGAAAAACCGAA",8,201.35,9.98,-0.78,0.08,2.57,1.01,0,">1 nonsynonymous","N13C C61T",2
"lib1","SARS-CoV-2","GAGTTGAAAGTTGAGA",2,64.86,6,-4.76,1.27,1.5,1.14,0.02,">1 nonsynonymous","C158G C195L",2
"lib1","SARS-CoV-2","GAGTTGAACAAAAAAC",6,112.82,10.15,-0.61,0.04,2.89,1,0,">1 nonsynonymous","G83D K87R L95I",3
"lib1","SARS-CoV-2","GAGTTGAATGAGGCAA",4,3,NA,NA,NA,NA,NA,NA,"stop","T3* D68K",2
"lib1","SARS-CoV-2","GAGTTGAGCAAGTTCT",9,44.3,6.86,-3.91,0.6,1.5,1.23,0.06,">1 nonsynonymous","N1K A89V E135L N151T",4
"lib1","SARS-CoV-2","GAGTTGAGCCAGTTAA",3,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K C61A G83F L95Q",4
"lib1","SARS-CoV-2","GAGTTGATCAGTGATA",1,10.49,6,-4.76,2,3,1.06,0,">1 nonsynonymous","P82L I88V Y93K N107F Y178H",5
"lib1","SARS-CoV-2","GAGTTGCAAACACATA",4,21.01,10.87,0.1,0.05,2.9,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGTTGCACTAGCGAA",7,81.1,8.08,-2.68,0.23,1.62,1.19,0.02,">1 nonsynonymous","I142Q V181M",2
"lib1","SARS-CoV-2","GAGTTGCCAGAGATCT",2,83.04,10.7,-0.06,0.07,2.88,1.11,0,"1 nonsynonymous","N1A",1
"lib1","SARS-CoV-2","GAGTTGCGCATAACTA",3,77.38,10.44,-0.33,0.05,2.9,1.06,0,">1 nonsynonymous","S147F G152Q",2
"lib1","SARS-CoV-2","GAGTTGGAAAAGTTTG",1,16.79,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","V71A Y143K",2
"lib1","SARS-CoV-2","GAGTTGGAAAATTGCC",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G C158L",2
"lib1","SARS-CoV-2","GAGTTGGGCAGCAAAA",2,42.47,10.66,-0.11,0.05,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GAGTTGGTAAACATCG",4,93.89,10.04,-0.72,0.1,2.17,1.04,0,">1 nonsynonymous","F12M A81K",2
"lib1","SARS-CoV-2","GAGTTGTAACAAACTG",4,17.47,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A89S K94V F134C Y143A",4
"lib1","SARS-CoV-2","GAGTTGTCAATAATTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S Q84N F126N F167I",4
"lib1","SARS-CoV-2","GAGTTGTCATATTGAC",1,14.12,10.18,-0.59,0.08,2.77,1.07,0.01,">1 nonsynonymous","P7L F134Q",2
"lib1","SARS-CoV-2","GAGTTGTCCACTTAAA",1,15.36,8.52,-2.25,0.26,1.5,1.06,0.03,">1 nonsynonymous","A33Q D90M F99L",3
"lib1","SARS-CoV-2","GAGTTTAAACATACAA",4,60.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y R136P",2
"lib1","SARS-CoV-2","GAGTTTAAAGCACGAG",3,27.39,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N107Q F167P A190S",3
"lib1","SARS-CoV-2","GAGTTTAACAGAGGAC",2,48.14,6.79,-3.98,0.36,1.5,1.14,0.02,">1 nonsynonymous","K132V C158R",2
"lib1","SARS-CoV-2","GAGTTTAAGCCAACTA",1,9.04,9.13,-1.63,0.26,1.88,1.06,0.02,">1 nonsynonymous","T15F Q84W",2
"lib1","SARS-CoV-2","GAGTTTACAGAGAGTA",4,50.22,10.29,-0.47,0.06,2.77,1,0,"1 nonsynonymous","E186L",1
"lib1","SARS-CoV-2","GAGTTTACGTTGCTTG",7,67.47,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","Y39V L162D R179L G196V",4
"lib1","SARS-CoV-2","GAGTTTAGAAATTATA",5,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T K132L G146R",3
"lib1","SARS-CoV-2","GAGTTTAGAGATAATA",1,6.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S S45G P82K N118F",4
"lib1","SARS-CoV-2","GAGTTTATAAGATCAA",3,20.42,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","R25L K87R L125C",3
"lib1","SARS-CoV-2","GAGTTTATACGTATCA",1,36.64,6,-4.76,2,2.78,1.21,0,">1 nonsynonymous","A18F V20L T63P Q84M I142F",5
"lib1","SARS-CoV-2","GAGTTTATGAACATTC",1,0.12,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GAGTTTCATATCTTAA",7,33.66,10.41,-0.36,0.07,2.93,1.02,0,">1 nonsynonymous","T55A Q84H K87L",3
"lib1","SARS-CoV-2","GAGTTTCCCAAAAGTT",7,150.03,10.26,-0.5,0.05,2.84,1.04,0,">1 nonsynonymous","R16W T85E T100H",3
"lib1","SARS-CoV-2","GAGTTTCGCGGTCTCC",5,51.72,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38P N157P",2
"lib1","SARS-CoV-2","GAGTTTCGGATTACAT",6,56.07,9.26,-1.5,0.1,2.59,1.13,0,">1 nonsynonymous","Y165M V173A",2
"lib1","SARS-CoV-2","GAGTTTGCAGTTACAT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","P7A S41R K87* W106* R127F F160V",6
"lib1","SARS-CoV-2","GAGTTTGTCGCCCAAA",1,8.46,10.67,-0.09,0.25,2.87,1.01,0.01,">1 nonsynonymous","L5R L125F",2
"lib1","SARS-CoV-2","GAGTTTGTTGACTGCG",7,87.17,10.45,-0.31,0.03,2.88,1.03,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","GAGTTTGTTTAACCAC",6,0.27,NA,NA,NA,NA,NA,NA,"stop","I2F A14* V37I T46A R78C Y93M K132F K199H",8
"lib1","SARS-CoV-2","GAGTTTTAAGAAACCC",5,23.63,10.22,-0.54,0.17,2.63,1,0.02,">1 nonsynonymous","T15F E154R S164R",3
"lib1","SARS-CoV-2","GAGTTTTCTTTTAAGC",11,88.53,9.37,-1.39,0.1,2.13,1.11,0,">1 nonsynonymous","N107C G152R F160L L188T",4
"lib1","SARS-CoV-2","GAGTTTTTATTTGAGC",2,5.37,6,-4.76,2,1.5,1.24,0.08,">1 nonsynonymous","K56Y K94P N157S V173I",4
"lib1","SARS-CoV-2","GATAAAAAAAGGCGAT",4,23.6,9.04,-1.72,0.38,1.64,1.05,0.05,">1 nonsynonymous","T140M L162R",2
"lib1","SARS-CoV-2","GATAAAAAATAGAAAT",2,27.96,10.28,-0.49,0.12,2.57,1.05,0,">1 nonsynonymous","A14C F160M",2
"lib1","SARS-CoV-2","GATAAAAAATGTAGTT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P R127S",2
"lib1","SARS-CoV-2","GATAAAAACATAATTA",2,46.28,10.61,-0.15,0.03,2.97,1,0,">1 nonsynonymous","P7E N130F",2
"lib1","SARS-CoV-2","GATAAAAAGCATATAC",3,58.41,10.87,0.11,0.06,2.92,1.04,0,"1 nonsynonymous","R16Y",1
"lib1","SARS-CoV-2","GATAAAAAGCCTAGAT",6,85.03,8.7,-2.07,0.11,2.24,1.09,0,">1 nonsynonymous","D97Y Q176S",2
"lib1","SARS-CoV-2","GATAAAAATAGAATAG",2,64.02,10.89,0.13,0.07,2.93,1.04,0,">1 nonsynonymous","R16V S200V",2
"lib1","SARS-CoV-2","GATAAAAATAGGGCGG",7,44.29,6.45,-4.31,0.66,1.5,1.17,0.04,">1 nonsynonymous","G9L D34R Y91M T100V I104Q P161Y",6
"lib1","SARS-CoV-2","GATAAAAATCGAGACA",2,15.43,10.59,-0.17,0.12,2.75,1.17,0.01,">1 nonsynonymous","V37A G51S",2
"lib1","SARS-CoV-2","GATAAAAATTGTGGAT",2,145.05,10.72,-0.05,0.07,2.91,1.05,0,">1 nonsynonymous","K128L K199R",2
"lib1","SARS-CoV-2","GATAAAACAATCTAGT",3,108.33,10.76,-0.01,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAAAACACCTGAAT",5,49.71,6.06,-4.71,0.74,1.5,1.18,0.01,">1 nonsynonymous","S19F V37S N107S S147P",4
"lib1","SARS-CoV-2","GATAAAACACGCCTGG",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y N92W W106D K199R",4
"lib1","SARS-CoV-2","GATAAAACACGGGGAG",3,0.26,NA,NA,NA,NA,NA,NA,"stop","K87G D112C L162*",3
"lib1","SARS-CoV-2","GATAAAACACTAATTA",1,21.32,10.77,0.01,0.12,2.88,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATAAAACATACGACT",1,14.13,7.6,-3.17,0.24,1.62,1.09,0.02,">1 nonsynonymous","D112T E141R N171H",3
"lib1","SARS-CoV-2","GATAAAACCAACCTAA",3,112.34,10.79,0.02,0.07,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAAAACCGCAGAGA",2,72.73,10.76,0,0.07,2.95,1,0,"1 nonsynonymous","T85G",1
"lib1","SARS-CoV-2","GATAAAACTTAGACTA",1,29.87,10.62,-0.14,0.08,2.84,1.01,0,"1 nonsynonymous","P54D",1
"lib1","SARS-CoV-2","GATAAAAGAGTGAGAC",3,33,6.49,-4.28,0.48,1.5,1.1,0.03,">1 nonsynonymous","T55S N157H N171D",3
"lib1","SARS-CoV-2","GATAAAAGCCCAGGCG",2,1.35,NA,NA,NA,NA,NA,NA,"stop","L5* F44L",2
"lib1","SARS-CoV-2","GATAAAAGGAGGACAG",3,16.34,9.74,-1.03,0.13,2.12,1.03,0.01,">1 nonsynonymous","L5A P54T D97H R127S T201R",5
"lib1","SARS-CoV-2","GATAAAAGGATCGCCT",2,42.64,10.95,0.19,0.07,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GATAAAATAGTAAATA",2,44.15,8.15,-2.61,0.19,2.2,1.11,0.01,">1 nonsynonymous","L125C G166K",2
"lib1","SARS-CoV-2","GATAAAATGACGCTAG",2,41.33,6.7,-4.07,0.28,1.5,1.16,0.01,">1 nonsynonymous","D97L E141G C158S",3
"lib1","SARS-CoV-2","GATAAAATGGACGCAT",3,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88W L95E",2
"lib1","SARS-CoV-2","GATAAAATTTAGACTA",6,73.89,8.51,-2.25,0.22,1.5,1.03,0.02,">1 nonsynonymous","G83N A89G R136L",3
"lib1","SARS-CoV-2","GATAAACAATACTGCA",4,18.23,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","F62H P82R W106D S113I",4
"lib1","SARS-CoV-2","GATAAACAGTCAAATA",9,2.99,NA,NA,NA,NA,NA,NA,"stop","S69* R136T L162Q",3
"lib1","SARS-CoV-2","GATAAACATATAGATA",3,22.19,10.53,-0.23,0.1,2.87,1.03,0.01,">1 nonsynonymous","F44M C61R",2
"lib1","SARS-CoV-2","GATAAACATTCTACAG",2,37.9,10.39,-0.38,0.05,2.92,1.04,0,">1 nonsynonymous","K87R D98P",2
"lib1","SARS-CoV-2","GATAAACCATGAACCT",6,146.04,10.49,-0.27,0.04,2.93,1.01,0,"1 nonsynonymous","V32G",1
"lib1","SARS-CoV-2","GATAAACCGCCATGAT",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45C P96S Y119L",3
"lib1","SARS-CoV-2","GATAAACGACAAGCTA",3,38.05,10.39,-0.38,0.06,2.83,1.05,0,">1 nonsynonymous","V37T D90N D98S E141V A190S",5
"lib1","SARS-CoV-2","GATAAACGGAACATAG",3,34.99,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y35S K94L G152L V173E",4
"lib1","SARS-CoV-2","GATAAACGTCACAGAG",5,28.12,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y35R K87M L95Q",3
"lib1","SARS-CoV-2","GATAAACGTCCCCTGC",3,52.31,9.36,-1.4,0.06,2.81,1.08,0,">1 nonsynonymous","R27S G51S F126H",3
"lib1","SARS-CoV-2","GATAAACTAAAATGGT",2,14.19,10.68,-0.09,0.09,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAAACTCTACTCAT",2,0.83,NA,NA,NA,NA,NA,NA,"stop","F44R G83S V173*",3
"lib1","SARS-CoV-2","GATAAACTGAGAAACT",3,63.72,10.81,0.05,0.08,2.92,1.03,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","GATAAACTGTGTTTCC",7,194.12,10.63,-0.14,0.03,2.93,1.01,0,">1 nonsynonymous","V11L T201K",2
"lib1","SARS-CoV-2","GATAAACTTAACATCA",4,97.93,10.71,-0.05,0.06,2.89,1.09,0,"1 nonsynonymous","L188Q",1
"lib1","SARS-CoV-2","GATAAAGAAACTGAGT",15,225.04,10.64,-0.13,0.03,2.94,1.01,0,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","GATAAAGAATATATTA",2,21.94,10.8,0.03,0.09,2.76,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAAAGAATTTCCGC",1,32.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F99R A105E G155W P177S L187I",5
"lib1","SARS-CoV-2","GATAAAGACAACCCGT",5,58.36,10.65,-0.11,0.05,2.96,1.02,0,">1 nonsynonymous","D97S T140D",2
"lib1","SARS-CoV-2","GATAAAGACAACGCAG",5,1.74,NA,NA,NA,NA,NA,NA,"stop","F44* A81Q L95N S139P Y175R",5
"lib1","SARS-CoV-2","GATAAAGAGACCCATA",4,5.33,NA,NA,NA,NA,NA,NA,"stop","T55A Y66*",2
"lib1","SARS-CoV-2","GATAAAGATCAACGTA",3,32.61,6.4,-4.37,0.45,1.5,1.24,0.02,">1 nonsynonymous","V32S K94I",2
"lib1","SARS-CoV-2","GATAAAGATGTGCCGT",14,433.6,10.8,0.03,0.08,2.89,1.07,0,"1 nonsynonymous","N24K",1
"lib1","SARS-CoV-2","GATAAAGCAAGATCGG",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I D59V D97S Q163P",4
"lib1","SARS-CoV-2","GATAAAGCCCACTCGG",5,0.9,NA,NA,NA,NA,NA,NA,"stop","L38* G51R",2
"lib1","SARS-CoV-2","GATAAAGCTATTCCGC",3,14.93,8.68,-2.09,0.17,2.25,1.1,0.01,">1 nonsynonymous","T3A P96T T170H",3
"lib1","SARS-CoV-2","GATAAAGGAGCGAATA",4,10.07,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","A89S D98N A105R",3
"lib1","SARS-CoV-2","GATAAAGGCCCACAAT",2,13.85,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","I80P G86L G101Y",3
"lib1","SARS-CoV-2","GATAAAGGTGGAGGAG",1,27.43,8.55,-2.21,0.15,1.84,1.11,0.01,">1 nonsynonymous","P7V R73P T201R",3
"lib1","SARS-CoV-2","GATAAAGTCCGTACAG",6,43.91,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T85Q R136L F167G Y178V",4
"lib1","SARS-CoV-2","GATAAAGTGACAATCA",6,115.24,10.77,0,0.07,2.9,1.06,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GATAAAGTGCAAACAA",8,84.22,9.9,-0.87,0.11,1.92,1.04,0,">1 nonsynonymous","G9M F99H Y178H",3
"lib1","SARS-CoV-2","GATAAAGTGTCATCAA",6,62.47,10.66,-0.1,0.07,2.85,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GATAAAGTGTTTGCCG",1,2.39,NA,NA,NA,NA,NA,NA,"stop","A22R V37L W106R E135* S147A",5
"lib1","SARS-CoV-2","GATAAATACCAGTCCT",2,65.84,10.24,-0.52,0.08,2.8,1.03,0,">1 nonsynonymous","T63F K132N",2
"lib1","SARS-CoV-2","GATAAATACTGAACAC",5,28.83,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F8S L38S G51N C61I C150F",5
"lib1","SARS-CoV-2","GATAAATATCGAAATT",2,10.45,6.21,-4.55,0.92,1.5,1.08,0.04,">1 nonsynonymous","E10W L57N G86S",3
"lib1","SARS-CoV-2","GATAAATCAACAATGT",2,27.84,9.34,-1.42,0.2,1.8,1.08,0.02,">1 nonsynonymous","C6V R136I",2
"lib1","SARS-CoV-2","GATAAATCAGAAAATG",5,2.28,NA,NA,NA,NA,NA,NA,"stop","I28E I72L N107R E141* T148K",5
"lib1","SARS-CoV-2","GATAAATCCATAATCC",5,2.02,NA,NA,NA,NA,NA,NA,"stop","A89* V103P A145L",3
"lib1","SARS-CoV-2","GATAAATCCGTTAAAA",1,97.9,10.64,-0.13,0.07,2.92,1.05,0,"1 nonsynonymous","V173N",1
"lib1","SARS-CoV-2","GATAAATCCGTTATAC",4,320.89,8.38,-2.39,0.1,2.21,1.06,0,"1 nonsynonymous","Q176I",1
"lib1","SARS-CoV-2","GATAAATCGAATTCTG",7,3.33,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","GATAAATCTGACAAGA",3,28.76,10.58,-0.18,0.12,2.66,1.09,0.01,">1 nonsynonymous","F134C K199T",2
"lib1","SARS-CoV-2","GATAAATCTTCAATTA",18,158.82,9.27,-1.49,0.15,1.5,1.1,0.01,">1 nonsynonymous","L60Y V181F",2
"lib1","SARS-CoV-2","GATAAATCTTGCATCT",10,78.35,7.37,-3.4,0.31,1.5,1.18,0.02,">1 nonsynonymous","E10R Y35E F44L T85N D97A T201K",6
"lib1","SARS-CoV-2","GATAAATGCCGCCCGT",5,172.15,10.75,-0.02,0.06,2.84,1.07,0,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","GATAAATGTGTCCCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R N40S T170F",3
"lib1","SARS-CoV-2","GATAAATTAATCGAAC",5,33.74,8.7,-2.06,0.14,1.76,1.12,0.01,">1 nonsynonymous","C6N T15V S45Y T148N P197S",5
"lib1","SARS-CoV-2","GATAAATTCAGATAAG",2,13.86,6,-4.76,2,3,1.4,0.03,">1 nonsynonymous","D98M V103N",2
"lib1","SARS-CoV-2","GATAACAACAGAACGA",8,41.27,6.8,-3.97,0.63,1.5,1.09,0.08,">1 nonsynonymous","L57A I88S",2
"lib1","SARS-CoV-2","GATAACAACCACCTAT",8,48.02,10.4,-0.36,0.07,2.87,1.08,0,">1 nonsynonymous","V37W G51A",2
"lib1","SARS-CoV-2","GATAACACCAACCTCA",12,126.69,8.72,-2.04,0.17,2.2,1.09,0.01,">1 nonsynonymous","Y39L Y121G",2
"lib1","SARS-CoV-2","GATAACAGCGGTGATT",5,0.58,NA,NA,NA,NA,NA,NA,"stop","N1M D98N L162*",3
"lib1","SARS-CoV-2","GATAACAGGAAATTAG",4,50.6,6.08,-4.69,0.49,1.53,1.1,0,">1 nonsynonymous","F17T V103W G152W",3
"lib1","SARS-CoV-2","GATAACAGGCCTACAA",4,2.67,NA,NA,NA,NA,NA,NA,"stop","E10R Y93* E154D",3
"lib1","SARS-CoV-2","GATAACATAAGGCGGA",2,43.74,9.98,-0.78,0.1,2.62,1.04,0,">1 nonsynonymous","V77Q S129R T201N",3
"lib1","SARS-CoV-2","GATAACATAGCACCCT",2,21.13,6,-4.76,2,3,1.33,0.02,">1 nonsynonymous","G9Y A42S K94R D112K",4
"lib1","SARS-CoV-2","GATAACATCCTGTCAC",12,228.71,7.36,-3.41,0.16,1.88,1.15,0.01,"1 nonsynonymous","Y175T",1
"lib1","SARS-CoV-2","GATAACATGTAAAGAT",1,23.68,10.22,-0.54,0.1,2.64,1.16,0.01,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","GATAACATGTAACGAC",5,14.29,9.43,-1.34,0.3,1.5,1.17,0.03,">1 nonsynonymous","L60M V103A",2
"lib1","SARS-CoV-2","GATAACCAAGTGACAC",6,44.63,9.37,-1.39,0.13,1.69,1.12,0.01,">1 nonsynonymous","T3S D90H Y123T",3
"lib1","SARS-CoV-2","GATAACCAATTGATAA",10,225.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35L F44P L60R P177L T201E",5
"lib1","SARS-CoV-2","GATAACCACCTTTAAA",3,12.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T55E P96W S147R F167L",4
"lib1","SARS-CoV-2","GATAACCACGGTATTT",2,12.96,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","P7L G86D L95R K199C",4
"lib1","SARS-CoV-2","GATAACCAGTCATAAA",4,24.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88G R124T",2
"lib1","SARS-CoV-2","GATAACCCAAGTCAAC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","G83D A105* E186F",3
"lib1","SARS-CoV-2","GATAACCCCCAAAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","I2R S36K K94Y D112G I138*",5
"lib1","SARS-CoV-2","GATAACCCTTATCCGA",3,0.73,NA,NA,NA,NA,NA,NA,"stop","A33C F70*",2
"lib1","SARS-CoV-2","GATAACCTAGAAGGTT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F8S S19* K56G D90H V103D",5
"lib1","SARS-CoV-2","GATAACCTATACCTGG",6,0.68,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib1","SARS-CoV-2","GATAACCTGAATCCTG",2,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y F134P",2
"lib1","SARS-CoV-2","GATAACGAAGGGACGT",3,25.88,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","I72P",1
"lib1","SARS-CoV-2","GATAACGGCACCGTTA",3,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R F44T C102K P149Y G172F",5
"lib1","SARS-CoV-2","GATAACGGCATAGTAA",5,103.61,8.66,-2.11,0.08,2.73,1.1,0,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","GATAACGGTACAGCAG",3,46.44,6.41,-4.35,0.73,1.5,1.18,0.04,">1 nonsynonymous","V71G D97F",2
"lib1","SARS-CoV-2","GATAACGTGAAAACGG",3,53.03,10.75,-0.01,0.04,2.97,1,0,"1 nonsynonymous","N4C",1
"lib1","SARS-CoV-2","GATAACTACATAAGTC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","A42V K87C Y91*",3
"lib1","SARS-CoV-2","GATAACTAGCAAGTAA",1,84.33,8.73,-2.03,0.19,2.26,1.11,0.01,">1 nonsynonymous","A105S L122W Q176L",3
"lib1","SARS-CoV-2","GATAACTATAAACGTT",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Y D98F D112T",3
"lib1","SARS-CoV-2","GATAACTCAAGTAGGC",5,43.17,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N40Q P54T T63P P82R",4
"lib1","SARS-CoV-2","GATAACTCCATCTCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A W23K Y66C",3
"lib1","SARS-CoV-2","GATAACTCCCGTGCCT",6,71.18,10.8,0.03,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAACTGATAATTGA",8,105.43,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F70P G117C",2
"lib1","SARS-CoV-2","GATAACTGATCAAAGC",5,2.56,NA,NA,NA,NA,NA,NA,"stop","I28* T55D I72M D90Y L95N T201H",6
"lib1","SARS-CoV-2","GATAACTTGAACAAAT",2,14.46,6.34,-4.42,2,1.5,1.18,0.04,">1 nonsynonymous","C6R R124H P133F G146A Y178P",5
"lib1","SARS-CoV-2","GATAACTTTAAAGCCT",4,44.69,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","T3I N30S T55S V71K",4
"lib1","SARS-CoV-2","GATAACTTTCTGTAAT",2,46.18,10.66,-0.1,0.06,2.86,1.06,0,">1 nonsynonymous","N1A G9M",2
"lib1","SARS-CoV-2","GATAAGAAACCACTGA",2,23.04,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6R G86K D98M N107P",4
"lib1","SARS-CoV-2","GATAAGAAACGATCCC",1,38.26,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","V103Y R136S Q176S",3
"lib1","SARS-CoV-2","GATAAGAAAGTTAATG",5,54.82,10.74,-0.03,0.07,2.88,1.09,0,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","GATAAGAAATCTGCAA",5,83.57,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L57H P82M Y93F",3
"lib1","SARS-CoV-2","GATAAGAAGACCAAAA",4,25.74,10.03,-0.73,0.08,2.12,1.03,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","GATAAGAATGAGTCAG",2,53.13,9.77,-1,0.08,2.1,1.09,0,">1 nonsynonymous","A14H D98Y",2
"lib1","SARS-CoV-2","GATAAGACCAACACTT",4,13.96,6,-4.76,2,3,1.26,0.03,">1 nonsynonymous","I2V G9W A33M A67S P133T S147Y Y165S",7
"lib1","SARS-CoV-2","GATAAGAGATTTGCGT",10,0.91,NA,NA,NA,NA,NA,NA,"stop","K26* Y35L S53L Q84L P161I",5
"lib1","SARS-CoV-2","GATAAGAGTGCATGCT",14,1.68,NA,NA,NA,NA,NA,NA,"stop","L5* A14L S53N Y143Q T148L Q168L",6
"lib1","SARS-CoV-2","GATAAGATAGATCTAA",3,7.3,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","N151D P169R L183A",3
"lib1","SARS-CoV-2","GATAAGATCACTCAAA",13,87.29,6.43,-4.33,0.36,1.5,1.11,0.01,">1 nonsynonymous","A33R L38C F44L L122P",4
"lib1","SARS-CoV-2","GATAAGATCGTATTTT",14,146.2,6,-4.76,1.55,1.5,1.18,0.02,">1 nonsynonymous","T85F W106S R124Y",3
"lib1","SARS-CoV-2","GATAAGCAACAAGAGG",1,60.28,10.53,-0.24,0.06,2.97,1.02,0,">1 nonsynonymous","G9C L122K T140F",3
"lib1","SARS-CoV-2","GATAAGCCAAACCACA",2,17.15,10.68,-0.08,0.07,2.86,1.09,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","GATAAGCCCCCAGACG",6,84.86,10.3,-0.46,0.07,2.83,1.03,0,">1 nonsynonymous","D34R L188V",2
"lib1","SARS-CoV-2","GATAAGCCGATCTTCT",1,14.65,8.14,-2.63,0.26,1.64,1.13,0.02,">1 nonsynonymous","N1T A14R N40G Q144F",4
"lib1","SARS-CoV-2","GATAAGCCTTGACTGA",5,117.24,10.77,0.01,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAAGCGAACTTGGG",1,28.15,10.67,-0.09,0.11,2.84,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATAAGCGCAGTATAA",3,15.89,9.98,-0.79,0.18,2.26,1.02,0.02,">1 nonsynonymous","N1L N64L L111G",3
"lib1","SARS-CoV-2","GATAAGCGGTGGCTAA",6,25.51,10.11,-0.65,0.11,2.35,1.06,0.01,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","GATAAGCTAACATTGG",5,32.56,10.67,-0.09,0.04,2.92,1.03,0,"1 nonsynonymous","Y39N",1
"lib1","SARS-CoV-2","GATAAGCTAGTATATT",7,56.53,6,-4.76,2,3,1.24,0,">1 nonsynonymous","F12R R16M G83Y P149F F167S",5
"lib1","SARS-CoV-2","GATAAGGAACACCCGA",5,19.42,6.24,-4.53,1.16,1.5,1.21,0.06,">1 nonsynonymous","Y50L Q144L",2
"lib1","SARS-CoV-2","GATAAGGAACCGTTGT",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107W L122G F160S",3
"lib1","SARS-CoV-2","GATAAGGAAGAATTAG",8,96.5,10.39,-0.37,0.05,2.88,1.08,0,">1 nonsynonymous","N30Q N58D",2
"lib1","SARS-CoV-2","GATAAGGACACACCAT",2,75.12,9.55,-1.21,0.18,1.82,1.12,0.01,">1 nonsynonymous","D34E Q79M K198M",3
"lib1","SARS-CoV-2","GATAAGGACAGATATG",1,23.56,6.91,-3.85,0.57,1.5,1.12,0.05,">1 nonsynonymous","G83R F126P S139N",3
"lib1","SARS-CoV-2","GATAAGGCTGACTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19L V65* N130G Q168S",4
"lib1","SARS-CoV-2","GATAAGGTACAGCCAG",2,91.33,10.22,-0.55,0.06,2.81,1.09,0,">1 nonsynonymous","S36A T55L N120C",3
"lib1","SARS-CoV-2","GATAAGTAAACAATAA",8,186.01,9.91,-0.86,0.07,2.38,1.04,0,">1 nonsynonymous","L5G Y91Q",2
"lib1","SARS-CoV-2","GATAAGTACCTGTATT",1,17.27,8.76,-2.01,0.18,1.85,1.14,0.01,">1 nonsynonymous","G83Y A105C P133A",3
"lib1","SARS-CoV-2","GATAAGTATGTAAGTT",1,11.75,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N157Y Q176M",2
"lib1","SARS-CoV-2","GATAAGTTCAGTAAAA",6,120.22,10.27,-0.5,0.05,2.88,1.04,0,">1 nonsynonymous","G174N Y178S",2
"lib1","SARS-CoV-2","GATAAGTTCATCCGCA",5,1.39,NA,NA,NA,NA,NA,NA,"stop","T55P F134S G172*",3
"lib1","SARS-CoV-2","GATAATAAATAACGTG",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L L38I A89K",3
"lib1","SARS-CoV-2","GATAATAACCTTGAGA",4,49.51,6,-4.76,1.66,1.5,1.14,0.02,">1 nonsynonymous","F99L I104D E141L P161I",4
"lib1","SARS-CoV-2","GATAATAACTGAATTT",4,20.17,10.64,-0.12,0.11,2.82,1,0,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","GATAATAACTTCGGAC",4,129.22,10.18,-0.58,0.05,2.91,1,0,">1 nonsynonymous","G51D K87T",2
"lib1","SARS-CoV-2","GATAATAAGACGATAA",2,29.75,10.19,-0.57,0.06,2.84,1,0,">1 nonsynonymous","I28A L122V",2
"lib1","SARS-CoV-2","GATAATAAGATACAAT",3,80.3,9.64,-1.13,0.11,2.49,1.07,0,">1 nonsynonymous","A14C G116F",2
"lib1","SARS-CoV-2","GATAATAAGATCTACA",1,5.51,7.31,-3.46,0.29,1.87,1.17,0.02,">1 nonsynonymous","I142F N157C",2
"lib1","SARS-CoV-2","GATAATACTAACATAA",7,270.86,8.4,-2.36,0.1,2.82,1.09,0,"1 nonsynonymous","Y175S",1
"lib1","SARS-CoV-2","GATAATAGCAATGCCA",2,24.15,9.98,-0.79,0.09,2.66,1,0,">1 nonsynonymous","K87H W106A",2
"lib1","SARS-CoV-2","GATAATAGCCGAACAG",2,39.02,10.52,-0.25,0.06,2.92,1.05,0,">1 nonsynonymous","V32F V52C",2
"lib1","SARS-CoV-2","GATAATAGCGACAAAC",1,6.63,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","D137R",1
"lib1","SARS-CoV-2","GATAATAGGTACTAAC",2,15.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S P82S K87N N151D A190E",5
"lib1","SARS-CoV-2","GATAATAGTAAACAAT",1,43,10.85,0.08,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAATATAAATGACT",8,72.75,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T46L V52R V77F",3
"lib1","SARS-CoV-2","GATAATATATACGAAT",1,7.92,10.86,0.09,0.08,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAATATATTGGATG",9,29.98,6.73,-4.03,0.34,1.5,1.18,0.02,">1 nonsynonymous","S41N P82M K128S E135I",4
"lib1","SARS-CoV-2","GATAATATCCAACATA",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F K199W",2
"lib1","SARS-CoV-2","GATAATATCCATATTC",2,41.59,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","GATAATATGTTAACGA",2,17.4,10.63,-0.13,0.12,2.78,1.12,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","GATAATCAAAAACAAA",4,67.37,8.98,-1.78,0.15,1.77,1.19,0.01,">1 nonsynonymous","A14I L60P P149C",3
"lib1","SARS-CoV-2","GATAATCACGATAATG",3,13.62,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","L5M V37I T46F E141G C150E F167I",6
"lib1","SARS-CoV-2","GATAATCACTTGTGGA",2,1.02,NA,NA,NA,NA,NA,NA,"stop","P54A Q84* K87N V103G S113V T140H P161F",7
"lib1","SARS-CoV-2","GATAATCAGCATCAAA",11,149.17,10.79,0.02,0.07,2.88,1.07,0,"1 nonsynonymous","K128D",1
"lib1","SARS-CoV-2","GATAATCATTATCCAT",4,121.83,10.41,-0.35,0.06,2.92,1.01,0,">1 nonsynonymous","G9L K114E",2
"lib1","SARS-CoV-2","GATAATCCAATGCTGT",3,68.17,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S19R R78H A89S I104M Y175E",5
"lib1","SARS-CoV-2","GATAATCCGTCAAATT",8,196.59,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68R D97K F126I Q176S",4
"lib1","SARS-CoV-2","GATAATCCTAGAAATG",7,45.91,9.85,-0.91,0.14,2.12,1.04,0.01,">1 nonsynonymous","F12M A81V",2
"lib1","SARS-CoV-2","GATAATCGGTGGATCT",1,19.99,9.11,-1.65,0.08,2.77,1.18,0,">1 nonsynonymous","Y119L C195S",2
"lib1","SARS-CoV-2","GATAATCTAGTTATCG",5,39.74,10.68,-0.08,0.05,2.95,1.02,0,">1 nonsynonymous","K56H F160M",2
"lib1","SARS-CoV-2","GATAATCTGGGAGTAA",1,2.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185H",1
"lib1","SARS-CoV-2","GATAATCTTTTGCGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* Y66R K87Y E141V G152Y",5
"lib1","SARS-CoV-2","GATAATGAAGTAAAGA",3,26.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136E C158R Y165G",3
"lib1","SARS-CoV-2","GATAATGAATATTGAG",6,91.72,10.8,0.04,0.07,2.85,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAATGACAACAGCC",3,0.62,NA,NA,NA,NA,NA,NA,"stop","C61K G86K D112* Q176V",4
"lib1","SARS-CoV-2","GATAATGATACAAAAG",3,16.71,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86D Y159R G174P",3
"lib1","SARS-CoV-2","GATAATGATGATATTG",8,118.14,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D59T D90N Y119S C158L",4
"lib1","SARS-CoV-2","GATAATGCATCGTAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","K87* Y119G A145V",3
"lib1","SARS-CoV-2","GATAATGCCCATTTGG",7,101.77,6,-4.76,2,3,1.28,0,">1 nonsynonymous","P96L N107G R127S P177Q",4
"lib1","SARS-CoV-2","GATAATGCGTAACACT",3,51.29,10.66,-0.1,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAATGGAAGCCTCA",5,38.27,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","V20W",1
"lib1","SARS-CoV-2","GATAATGGCCCGCAAA",3,48.74,10.72,-0.04,0.06,2.94,1.02,0,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","GATAATGGGATCGTAT",1,19.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S53K L60T A105S Y143L T170Y",5
"lib1","SARS-CoV-2","GATAATGGTAACGAGA",1,90.88,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K87L P161L",2
"lib1","SARS-CoV-2","GATAATGTACCAACAA",2,9.89,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C31F F99M N118A Y165E",4
"lib1","SARS-CoV-2","GATAATGTGATTGCAC",6,0.28,NA,NA,NA,NA,NA,NA,"stop","R16L S41L S69* I88Q L95I P161G Y178F",7
"lib1","SARS-CoV-2","GATAATGTTTAGGTGG",3,61.88,10.08,-0.68,0.07,2.82,1.05,0,">1 nonsynonymous","L122M I142N",2
"lib1","SARS-CoV-2","GATAATTATCTTCATT",3,53.76,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T55I Y93K G146M",3
"lib1","SARS-CoV-2","GATAATTCAATATAAA",3,48.94,8.69,-2.07,0.2,1.59,1.3,0.03,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","GATAATTCCTACAAAG",4,39.8,7.98,-2.78,0.47,1.5,1.02,0.07,">1 nonsynonymous","S19M D68V W106S Y175W",4
"lib1","SARS-CoV-2","GATAATTCGGTGTCCG",9,116.37,10.31,-0.46,0.06,2.85,1.02,0,">1 nonsynonymous","A89V L122T",2
"lib1","SARS-CoV-2","GATAATTCTAGGTACG",6,42.34,8.62,-2.15,0.11,2.88,1.05,0,">1 nonsynonymous","T85D N157A S200L",3
"lib1","SARS-CoV-2","GATAATTCTTTGTGCT",3,36.01,10.64,-0.12,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAATTGAAGTCTAT",2,27.04,10.87,0.11,0.18,2.75,1,0.01,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","GATAATTGCGAAACTA",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L S113I",2
"lib1","SARS-CoV-2","GATAATTTCCTAGTGA",6,1.27,NA,NA,NA,NA,NA,NA,"stop","N40K L95* E154M",3
"lib1","SARS-CoV-2","GATAATTTTACAATCA",9,118.13,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F12C V20S",2
"lib1","SARS-CoV-2","GATACAAAAAAATCGT",8,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K D137Y K199F",3
"lib1","SARS-CoV-2","GATACAAAAAACATAG",6,47,10.67,-0.09,0.07,2.91,1,0,">1 nonsynonymous","V37S I142H",2
"lib1","SARS-CoV-2","GATACAAAATAGTATT",6,95.25,10.2,-0.56,0.04,2.91,1,0,">1 nonsynonymous","Y35R Y39P A192T",3
"lib1","SARS-CoV-2","GATACAAACCTAAAAA",8,125.03,6.1,-4.67,0.64,1.5,1.18,0.01,">1 nonsynonymous","S129T G146L Q168T",3
"lib1","SARS-CoV-2","GATACAAAGACCGAGT",1,37.49,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","P82L W106L P133D",3
"lib1","SARS-CoV-2","GATACAAATATACCGT",6,82.06,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N4S G9S S41I I80T Y175C",5
"lib1","SARS-CoV-2","GATACAACAAGTACCA",2,10.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10G Y91S G152Y",3
"lib1","SARS-CoV-2","GATACAACAAGTCGTT",5,0.16,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib1","SARS-CoV-2","GATACAACCATAAAGC",7,64.51,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","C6Y L38V V52A G83Y P96A",5
"lib1","SARS-CoV-2","GATACAACCCTTTAAA",2,44.72,10.65,-0.11,0.04,3,1,0,">1 nonsynonymous","T85S T140I",2
"lib1","SARS-CoV-2","GATACAACCTTAAAAT",6,192.81,10.73,-0.03,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATACAACTATGGCGG",5,21.93,6.73,-4.03,0.55,1.5,1.14,0.05,">1 nonsynonymous","I2N F70L D112L",3
"lib1","SARS-CoV-2","GATACAAGAAAGGGAA",1,0.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95K",1
"lib1","SARS-CoV-2","GATACAAGAACTGATT",1,24.82,9.16,-1.6,0.12,2.58,1.16,0.01,">1 nonsynonymous","V32Q K87M Y178I",3
"lib1","SARS-CoV-2","GATACAAGACACGTAA",8,96.43,9.79,-0.98,0.06,2.71,1.04,0,">1 nonsynonymous","C6Y K48R T55F",3
"lib1","SARS-CoV-2","GATACAAGCCCAAGTA",3,78.26,8.4,-2.36,0.18,2.15,1.13,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","GATACAAGGACCCAAC",11,237.88,10.44,-0.33,0.04,2.89,1.04,0,">1 nonsynonymous","S41L F62A I138N",3
"lib1","SARS-CoV-2","GATACAAGTGGCCAGA",3,8.17,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","A14L N58P G74L D97C V103R F156V",6
"lib1","SARS-CoV-2","GATACAATAAAAGTGA",3,75.35,10.52,-0.24,0.03,2.88,1.06,0,">1 nonsynonymous","F156L N171Y E186A",3
"lib1","SARS-CoV-2","GATACAATAAGGACGT",6,66.59,6.42,-4.34,0.27,1.5,1.11,0,">1 nonsynonymous","N40I D90Y R127L",3
"lib1","SARS-CoV-2","GATACAATAGAACCCT",1,36.73,10.93,0.16,0.1,2.91,1.03,0,">1 nonsynonymous","N4S Q168Y",2
"lib1","SARS-CoV-2","GATACAATTCCCTTTT",7,64.43,9.07,-1.69,0.18,1.5,1.12,0.01,"1 nonsynonymous","W23K",1
"lib1","SARS-CoV-2","GATACACAAACTCCTC",9,94.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35I Y50N I88M",3
"lib1","SARS-CoV-2","GATACACAAGTCCAAA",3,154.34,6.13,-4.64,0.68,1.5,1.18,0.02,">1 nonsynonymous","S45F Y119S F156T Q168R G174L",5
"lib1","SARS-CoV-2","GATACACACCATGAAT",5,30.42,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F70A Q144K Q168T",3
"lib1","SARS-CoV-2","GATACACGGACTATGA",1,3.44,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","GATACACGTGAAGGAA",7,103.54,9.83,-0.93,0.05,2.78,1.05,0,">1 nonsynonymous","L60T A145E G196I",3
"lib1","SARS-CoV-2","GATACACTACACAATA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","I2T S41* L60F Y121W P149A",5
"lib1","SARS-CoV-2","GATACACTATCTGACC",5,55.68,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","E10L R73L Y165H V173L",4
"lib1","SARS-CoV-2","GATACACTTACAGATT",7,55.5,6,-4.76,1.28,1.5,1.11,0.01,">1 nonsynonymous","I88E S129A",2
"lib1","SARS-CoV-2","GATACACTTGAGAAAG",3,2.19,NA,NA,NA,NA,NA,NA,"stop","Y39* E141G",2
"lib1","SARS-CoV-2","GATACAGAAAGATTAG",2,4,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","GATACAGAAGAACTCA",6,63.33,10.61,-0.15,0.04,2.93,1.01,0,">1 nonsynonymous","I2Y G116D",2
"lib1","SARS-CoV-2","GATACAGAGAAGGTAT",11,192.48,10.78,0.01,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GATACAGCTCTGCCAT",9,23.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C6V C49D N107V S200L",4
"lib1","SARS-CoV-2","GATACAGGGAATCTCA",2,10.43,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","I80S F160H",2
"lib1","SARS-CoV-2","GATACAGGTAATGGCA",3,33.01,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R27D Y66P",2
"lib1","SARS-CoV-2","GATACAGTAAACTGAC",5,43.81,6.15,-4.61,0.89,1.5,1.17,0.02,">1 nonsynonymous","Q84A K128F T148K C158F",4
"lib1","SARS-CoV-2","GATACAGTAACCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9K V52* D59N Q144S",4
"lib1","SARS-CoV-2","GATACATAAAAATATT",3,37.99,10.85,0.09,0.06,2.75,1.22,0,"synonymous","",0
"lib1","SARS-CoV-2","GATACATACAATGTAA",6,49.12,7.55,-3.21,0.25,1.5,1.19,0.02,">1 nonsynonymous","D75P N120R E141R",3
"lib1","SARS-CoV-2","GATACATACACAAATC",3,16.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C49S Q84G S108K E141C K199Y",5
"lib1","SARS-CoV-2","GATACATAGACCTAGT",4,76.54,9.1,-1.67,0.14,1.65,1.14,0.01,">1 nonsynonymous","R27P R127S E135V",3
"lib1","SARS-CoV-2","GATACATCCCAACATG",4,16.19,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A42G C102L L131A Q144Y G166N T201E",6
"lib1","SARS-CoV-2","GATACATCGAGTTAAA",2,21.85,10.27,-0.49,0.06,2.42,1.01,0,">1 nonsynonymous","T55W P133L P197I",3
"lib1","SARS-CoV-2","GATACATCGTTAGCCG",6,99.01,9.92,-0.84,0.1,2.15,1.08,0,">1 nonsynonymous","Q79L T100N",2
"lib1","SARS-CoV-2","GATACATGGCGCTGAT",5,2686.98,9.91,-0.85,0.07,2.09,1.04,0,">1 nonsynonymous","V11S E141Q",2
"lib1","SARS-CoV-2","GATACATTAACATATA",9,41.01,6.94,-3.83,0.29,1.5,1.12,0.02,">1 nonsynonymous","L5M S43A W106Q P133K",4
"lib1","SARS-CoV-2","GATACATTACACTTAA",2,56.96,9.34,-1.42,0.14,2.63,1.2,0.01,">1 nonsynonymous","S41I N120T",2
"lib1","SARS-CoV-2","GATACATTACATATGC",3,28.05,8.29,-2.48,0.2,1.92,1.15,0.02,">1 nonsynonymous","Y35K V115M E154F",3
"lib1","SARS-CoV-2","GATACCAAAAGAGATG",11,184.79,9.2,-1.56,0.08,2.71,1.15,0,">1 nonsynonymous","Y66T G152P F160Q",3
"lib1","SARS-CoV-2","GATACCAATATAATGA",2,49.54,10.84,0.07,0.05,2.87,1.05,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","GATACCACAAAGGAAA",5,122.41,10.35,-0.41,0.05,2.85,1.02,0,">1 nonsynonymous","A81V A192D",2
"lib1","SARS-CoV-2","GATACCACAACACCTA",5,113.74,10.61,-0.16,0.03,2.92,1.02,0,">1 nonsynonymous","A14V Y178H",2
"lib1","SARS-CoV-2","GATACCACAGAAACAC",5,0,NA,NA,NA,NA,NA,NA,"stop","S36V D68* Y91S C102F",4
"lib1","SARS-CoV-2","GATACCACAGACAACA",5,90.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V32K D97F N107Y R136G G174Q",5
"lib1","SARS-CoV-2","GATACCACCCAATTCT",3,47.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S45L Q84W F99H",3
"lib1","SARS-CoV-2","GATACCACGAGTCTGG",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72C A81R S139F",3
"lib1","SARS-CoV-2","GATACCAGCACTATAT",1,9.22,10.69,-0.07,0.1,2.98,1.03,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","GATACCAGCGACTCAT",2,103.23,10.64,-0.12,0.05,2.94,1,0,">1 nonsynonymous","E10P G51N",2
"lib1","SARS-CoV-2","GATACCATCGCCCTGT",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M S45G C49T K87E G117R V182P",6
"lib1","SARS-CoV-2","GATACCCAAATATCAA",5,13.93,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G101Q I138M V173F",3
"lib1","SARS-CoV-2","GATACCCACCACTGTT",1,316.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A105R P149W V181E",3
"lib1","SARS-CoV-2","GATACCCACCGCCTAA",4,33.72,9.34,-1.42,0.15,2.27,1.1,0.01,">1 nonsynonymous","C6K I28L F160L",3
"lib1","SARS-CoV-2","GATACCCAGAGAACAG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","C6H Y35S T55*",3
"lib1","SARS-CoV-2","GATACCCTCACAGATA",1,6.47,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","C6R A42V T63V I104K S113P",5
"lib1","SARS-CoV-2","GATACCGAAGAGGCGG",1,63.95,10.23,-0.53,0.07,2.66,1.01,0,">1 nonsynonymous","F44T N120Q S139K",3
"lib1","SARS-CoV-2","GATACCGAATTAGATA",4,76.45,10.81,0.04,0.1,2.9,1.05,0,"1 nonsynonymous","I138V",1
"lib1","SARS-CoV-2","GATACCGAGAAGTGTA",1,48.21,10.73,-0.03,0.06,2.85,1,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","GATACCGATTTGCAAC",1,20.96,9.49,-1.28,0.12,2.7,1.11,0,">1 nonsynonymous","G51N E154F",2
"lib1","SARS-CoV-2","GATACCGTATTAAGAA",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G Y39F N107I Y165S",4
"lib1","SARS-CoV-2","GATACCGTTAGCTTTA",6,3.66,NA,NA,NA,NA,NA,NA,"stop","A14N V32M T63* D90N F156L",5
"lib1","SARS-CoV-2","GATACCTAATAAAAGT",1,26.33,10.61,-0.15,0.06,2.95,1,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","GATACCTACAGCTTGT",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K V32L K48S P54L C61W G86Q K94E A105L T170L",9
"lib1","SARS-CoV-2","GATACCTACATAACTT",1,9.75,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D59H N64V D137P F160L P161F K198R",6
"lib1","SARS-CoV-2","GATACCTAGGAGCGAT",1,15.59,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T3S G9S R25W S41R T63L W106S T148K",7
"lib1","SARS-CoV-2","GATACCTCAATCAACG",3,122.84,10.75,-0.02,0.05,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATACCTCCGATTTAT",1,26.29,8.76,-2.01,0.1,2.85,1.14,0,">1 nonsynonymous","K56M I142K F156V",3
"lib1","SARS-CoV-2","GATACCTGTAAGTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L S164Q",2
"lib1","SARS-CoV-2","GATACGAAAAAAAAAT",1,14.88,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F12R A67Y G146R",3
"lib1","SARS-CoV-2","GATACGAAAACACTTC",2,66.97,6.64,-4.13,0.26,1.5,1.2,0.01,">1 nonsynonymous","S43R R127C G152S",3
"lib1","SARS-CoV-2","GATACGAAACGCTAAC",4,52.55,9.97,-0.8,0.11,2.31,1,0.01,">1 nonsynonymous","K56E G86S",2
"lib1","SARS-CoV-2","GATACGAAAGAACAAA",4,103.44,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L5Y G172V T201P",3
"lib1","SARS-CoV-2","GATACGAACCGTTTAC",9,57.99,6.11,-4.66,0.54,1.5,1.11,0.01,">1 nonsynonymous","G9A A81E D90N R136T I142N G152L G196V",7
"lib1","SARS-CoV-2","GATACGAATAAGCTAC",2,9.7,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","D34C T63D L162M N171D",4
"lib1","SARS-CoV-2","GATACGAATAGAGATA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","F44L L57R G74*",3
"lib1","SARS-CoV-2","GATACGAATGATACAT",2,48.36,6,-4.76,1.62,1.5,1.09,0,">1 nonsynonymous","G86N T100A Y175S",3
"lib1","SARS-CoV-2","GATACGACAACTCAAG",6,60.17,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D59Y Y93W",2
"lib1","SARS-CoV-2","GATACGAGCTTCTTTA",1,55.14,9.15,-1.61,0.05,2.83,1.09,0,">1 nonsynonymous","Y143Q A190G",2
"lib1","SARS-CoV-2","GATACGAGGGTTCACC",6,28.38,9.53,-1.23,0.17,1.68,1.12,0.01,"1 nonsynonymous","L162K",1
"lib1","SARS-CoV-2","GATACGAGTTCATAAA",4,38.38,10.78,0.01,0.05,2.94,1.03,0,">1 nonsynonymous","N4T V37C",2
"lib1","SARS-CoV-2","GATACGATAACTTAAA",6,95.49,10.73,-0.03,0.04,2.93,1.03,0,"1 nonsynonymous","N110V",1
"lib1","SARS-CoV-2","GATACGATACTTTCCT",1,46.15,10.34,-0.43,0.08,2.82,1.1,0,">1 nonsynonymous","K87T V115S",2
"lib1","SARS-CoV-2","GATACGATGAAACCGG",10,7.9,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","G9R N13V S45L S147D L183A A190T",6
"lib1","SARS-CoV-2","GATACGATTCTAATTT",1,22.54,10.73,-0.04,0.07,2.95,1.02,0,"1 nonsynonymous","D98R",1
"lib1","SARS-CoV-2","GATACGATTTTAAAAC",2,16.48,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","F44N V71P A89P F99L S139G P161E",6
"lib1","SARS-CoV-2","GATACGCAATACCCGT",4,84.75,10.37,-0.39,0.03,2.84,1.05,0,">1 nonsynonymous","P54A A89S G146A",3
"lib1","SARS-CoV-2","GATACGCATTCCTATG",2,65.97,10.67,-0.09,0.06,2.87,1.1,0,"1 nonsynonymous","N109V",1
"lib1","SARS-CoV-2","GATACGCCTGACTAAC",5,53.96,6,-4.76,2,3,1.11,0,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GATACGCGACTATATT",2,12.12,6.36,-4.41,0.52,1.5,1.05,0.03,">1 nonsynonymous","L95E Q144M",2
"lib1","SARS-CoV-2","GATACGCGCATTATGG",3,42.36,10.57,-0.19,0.08,2.87,1.08,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","GATACGCTTACCTTGC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","S19* A33T S36P R124H N151M",5
"lib1","SARS-CoV-2","GATACGGAACTCGTTG",3,37.99,10.73,-0.04,0.07,3,1,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","GATACGGATGTACACG",2,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I K87F F99H",3
"lib1","SARS-CoV-2","GATACGGCCCGGACTT",2,13.05,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","W106P G174F",2
"lib1","SARS-CoV-2","GATACGGCTCTAACCT",1,48.52,10.04,-0.72,0.07,2.41,1.03,0,">1 nonsynonymous","T15W T55S V153F",3
"lib1","SARS-CoV-2","GATACGTACTATCAGT",1,56.48,10.34,-0.42,0.16,2.54,1.04,0.01,">1 nonsynonymous","G83A K114N",2
"lib1","SARS-CoV-2","GATACGTCAAACCGAC",3,64.74,7.92,-2.84,0.13,1.95,1.09,0.01,">1 nonsynonymous","F44R D59G F62I Y175C",4
"lib1","SARS-CoV-2","GATACGTTATGTTCGG",2,20.35,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K87S G101M S113F L125T",4
"lib1","SARS-CoV-2","GATACGTTCGACTATA",4,556.21,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","D112G T148G N151L N157M F167C",5
"lib1","SARS-CoV-2","GATACTAAATACAATC",1,8.01,10.67,-0.09,0.1,2.95,1.05,0.01,">1 nonsynonymous","V37E V115R T140F",3
"lib1","SARS-CoV-2","GATACTAAATCTCTCA",2,41.83,9.33,-1.44,0.2,1.5,1.09,0.02,">1 nonsynonymous","A22G S108G P149E",3
"lib1","SARS-CoV-2","GATACTACAAAAAATA",3,27.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A18L I72H T100E E135T T170R",5
"lib1","SARS-CoV-2","GATACTACACTACGTG",1,24.14,8.98,-1.78,0.19,1.85,1.14,0.02,">1 nonsynonymous","N4C R16N R27G L122F E141P",5
"lib1","SARS-CoV-2","GATACTACCAAGTTAA",7,139.76,10.76,-0.01,0.06,2.94,1.04,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","GATACTACGAACAAAA",2,106.19,9.44,-1.32,0.06,2.76,1.11,0,">1 nonsynonymous","V115E S164D",2
"lib1","SARS-CoV-2","GATACTACTACCAACA",1,26.18,10.31,-0.45,0.14,2.42,1.11,0.01,">1 nonsynonymous","A22H Y35N",2
"lib1","SARS-CoV-2","GATACTAGGACATCGC",2,40.14,10,-0.77,0.13,2.05,1.04,0.01,">1 nonsynonymous","T3P S43L E76G",3
"lib1","SARS-CoV-2","GATACTAGTTAGCCTA",4,45.37,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","R16K A89M Y123C G172S",4
"lib1","SARS-CoV-2","GATACTATAACAATTT",2,0.29,NA,NA,NA,NA,NA,NA,"stop","T3Q N64* A105M K114L Y121N E154C A190H",7
"lib1","SARS-CoV-2","GATACTATACAATCCA",2,57.9,10.76,-0.01,0.1,2.94,1.04,0.01,">1 nonsynonymous","A192N T201N",2
"lib1","SARS-CoV-2","GATACTATCTGAGCCA",2,23.88,10.01,-0.76,0.19,2.23,1.03,0.01,">1 nonsynonymous","V37L F44S D98V",3
"lib1","SARS-CoV-2","GATACTATGTGCATTT",3,39.66,6,-4.76,1.31,1.5,1.21,0.01,">1 nonsynonymous","P7E N30E I72S D90S P149E",5
"lib1","SARS-CoV-2","GATACTATTTAACCAT",7,209.56,10.69,-0.07,0.05,2.86,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GATACTCACATTGATT",2,19.16,10.73,-0.03,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GATACTCAGACTATTG",4,26.55,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D34S T63S A89G D98L S108L",5
"lib1","SARS-CoV-2","GATACTCATATAGCGC",4,6.56,10.23,-0.53,0.16,2.09,1,0,">1 nonsynonymous","K48F L60W",2
"lib1","SARS-CoV-2","GATACTCATTAAACAA",3,46.99,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S36K L131Y G166T",3
"lib1","SARS-CoV-2","GATACTCCAAAATCTA",2,89.55,10.31,-0.45,0.03,2.88,1.03,0,">1 nonsynonymous","N4S A105G",2
"lib1","SARS-CoV-2","GATACTCCGAGATTTA",4,39.85,6.26,-4.51,0.76,1.5,1.17,0.03,">1 nonsynonymous","D98N V182G",2
"lib1","SARS-CoV-2","GATACTCCTAGGATCC",2,61.88,10.66,-0.11,0.13,2.71,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATACTCGAAACGGCT",1,17.86,9.88,-0.89,0.22,2.18,1.05,0.02,">1 nonsynonymous","D34V E141Y",2
"lib1","SARS-CoV-2","GATACTCGGATTAAAT",3,26.75,6.15,-4.61,0.64,1.5,1.09,0.02,">1 nonsynonymous","R25S L131K G174A",3
"lib1","SARS-CoV-2","GATACTGACGAACAAG",3,46.21,9.68,-1.09,0.05,2.76,1.14,0,">1 nonsynonymous","R78Y N118T",2
"lib1","SARS-CoV-2","GATACTGATATTCTCC",4,17.94,9.43,-1.33,0.26,1.74,1.18,0.03,">1 nonsynonymous","F12Y N40S T63Y Q163Y",4
"lib1","SARS-CoV-2","GATACTGCGACTTTAG",13,118.84,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G146L Y165F",2
"lib1","SARS-CoV-2","GATACTGCTTGTTGAA",5,128.21,8.59,-2.18,0.17,1.87,1.15,0.01,">1 nonsynonymous","I2K G83I I142P N151M",4
"lib1","SARS-CoV-2","GATACTGGACGGGCCG",4,105.68,8.68,-2.09,0.14,1.5,1.12,0.01,">1 nonsynonymous","E10D L57N N107R",3
"lib1","SARS-CoV-2","GATACTGGATGATGGA",3,20.61,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Q84S C102F N107C P197S",4
"lib1","SARS-CoV-2","GATACTGTAGCAGGCA",6,27.4,6.46,-4.31,0.97,1.5,1.21,0.08,">1 nonsynonymous","E76N A105Q K128Q G166S",4
"lib1","SARS-CoV-2","GATACTTCATAATAAT",5,41.23,8.98,-1.78,0.11,1.64,1.1,0,">1 nonsynonymous","F12D T63N",2
"lib1","SARS-CoV-2","GATACTTCGTCATACT",8,82.04,6,-4.76,2,3,1.17,0,">1 nonsynonymous","W106L G117T Q144I",3
"lib1","SARS-CoV-2","GATACTTTAAACACTG",1,62.49,9.91,-0.86,0.09,2.82,1,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","GATACTTTACCCCGTA",2,22.44,10.55,-0.22,0.09,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GATACTTTTAACTTCC",8,778.05,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2G L95A N107F V181E",4
"lib1","SARS-CoV-2","GATAGAACAAATGCGA",3,0.66,NA,NA,NA,NA,NA,NA,"stop","F8* F47Y G51A Y119G",4
"lib1","SARS-CoV-2","GATAGAACAGGATCTT",3,2.38,NA,NA,NA,NA,NA,NA,"stop","Y66* D98R V173R",3
"lib1","SARS-CoV-2","GATAGAACTACTCTGT",7,71.63,10.26,-0.51,0.06,2.8,1.05,0,">1 nonsynonymous","G9A S45H G152F",3
"lib1","SARS-CoV-2","GATAGAAGATTAACGC",4,5.66,NA,NA,NA,NA,NA,NA,"stop","R27M S113P Y143* V153C",4
"lib1","SARS-CoV-2","GATAGAATAAGAAAAA",2,34.66,10.09,-0.68,0.09,2.82,1.03,0,">1 nonsynonymous","C31R C61T F160H",3
"lib1","SARS-CoV-2","GATAGAATCATTCTTG",2,1.03,NA,NA,NA,NA,NA,NA,"stop","F17W I72M Y119* G166N",4
"lib1","SARS-CoV-2","GATAGAATTGGAGTTG",2,19.76,10.83,0.06,0.06,3,1,0,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","GATAGACATCACATTA",2,18.34,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F62G S113P R127P",3
"lib1","SARS-CoV-2","GATAGACGACTCAATC",2,11.09,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","W106L Y119H C150V",3
"lib1","SARS-CoV-2","GATAGACGTGATTTTT",5,44.65,10.69,-0.07,0.08,2.88,1.09,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GATAGACTTTCAGTAA",7,131.49,10.7,-0.07,0.05,2.89,1.06,0,">1 nonsynonymous","S129G F160T",2
"lib1","SARS-CoV-2","GATAGAGAAAAGACAC",14,79.57,6,-4.76,1.66,1.5,1.18,0.01,">1 nonsynonymous","E10G A89T P96L I104W D112W R136G P177I",7
"lib1","SARS-CoV-2","GATAGAGACTCCCGAC",4,56.01,10.58,-0.19,0.04,2.99,1,0,">1 nonsynonymous","L38Y V115T P197V",3
"lib1","SARS-CoV-2","GATAGAGACTTGAGAC",2,27.73,9.29,-1.47,0.21,1.5,1,0.03,">1 nonsynonymous","T46I I80R D112W S129G T201Q",5
"lib1","SARS-CoV-2","GATAGAGCTGTATCAG",5,23.72,NA,NA,NA,NA,NA,NA,"stop","W23P A89D C102* K128G V173S S200D",6
"lib1","SARS-CoV-2","GATAGAGGTTATGATC",1,41.38,9.1,-1.67,0.08,2.93,1.09,0,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","GATAGATATTTTGAAA",1,13.9,9.37,-1.4,0.33,1.5,1,0.05,">1 nonsynonymous","W23E N64T",2
"lib1","SARS-CoV-2","GATAGATCTGCGCCCA",2,26.86,6.05,-4.71,0.42,3,1.12,0.01,">1 nonsynonymous","Q84G A89D I142W",3
"lib1","SARS-CoV-2","GATAGATTAAAATAGT",11,104.3,8.47,-2.3,0.39,1.5,1,0.06,">1 nonsynonymous","L5S F12S D97Y T148D",4
"lib1","SARS-CoV-2","GATAGCAAGGAATTAC",2,21.49,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N64L W106K R124I",3
"lib1","SARS-CoV-2","GATAGCAATAACGGCA",5,53.08,9.22,-1.54,0.18,1.77,1.06,0.02,">1 nonsynonymous","N13C N58T Y121F K198E",4
"lib1","SARS-CoV-2","GATAGCACACCCGTAA",2,70.6,10.76,0,0.06,2.96,1.01,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","GATAGCACAGGTCATT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","C61M S139*",2
"lib1","SARS-CoV-2","GATAGCACGAACCCGA",4,24.9,10,-0.76,0.17,2.18,1.03,0.01,">1 nonsynonymous","F12W S53T P149N",3
"lib1","SARS-CoV-2","GATAGCACTCAAAAGT",2,13.13,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","Y121T K132R G152I",3
"lib1","SARS-CoV-2","GATAGCAGAAAACATT",7,28.67,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L95R D97A L122R P133S Q144G L162S",6
"lib1","SARS-CoV-2","GATAGCAGACCATATC",1,7.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R27K S45F Y93S N171S",4
"lib1","SARS-CoV-2","GATAGCCAAAGCTGAA",3,87.82,10.25,-0.51,0.07,2.75,1.04,0,">1 nonsynonymous","T63I S129W T201R",3
"lib1","SARS-CoV-2","GATAGCCAATTAAAAA",2,78.6,10.07,-0.7,0.04,2.92,1.03,0,">1 nonsynonymous","T55H T63N G146T",3
"lib1","SARS-CoV-2","GATAGCCACTCACTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52Y D68R",2
"lib1","SARS-CoV-2","GATAGCCAGACACAAT",1,1.05,NA,NA,NA,NA,NA,NA,"stop","F99* Q168S",2
"lib1","SARS-CoV-2","GATAGCCATCACATTC",1,11.84,8.5,-2.27,0.15,2.7,1.09,0.01,">1 nonsynonymous","K56W K87Y N120T K198T",4
"lib1","SARS-CoV-2","GATAGCCTTTTGTGTT",5,102.63,10.75,-0.01,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAGCGAGGAAGGCC",5,16.8,6,-4.76,1.63,3,1.24,0.01,">1 nonsynonymous","G86A Y123V P133R",3
"lib1","SARS-CoV-2","GATAGCGGATGTACTG",4,0.83,NA,NA,NA,NA,NA,NA,"stop","P7V G51* T100L P169E V173M",5
"lib1","SARS-CoV-2","GATAGCGGGAAAACCA",3,17.82,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7L I88R E154N",3
"lib1","SARS-CoV-2","GATAGCTACATCAACA",4,20.43,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K94D F99S T201K",3
"lib1","SARS-CoV-2","GATAGGAAAAGTCGAC",3,1.24,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GATAGGACCGATAACT",2,15.27,8.25,-2.51,0.4,1.5,1.03,0.04,">1 nonsynonymous","D34P A105S I142S",3
"lib1","SARS-CoV-2","GATAGGAGGAATGTCT",3,68.89,10.04,-0.73,0.16,2.13,1.02,0.01,">1 nonsynonymous","V32C F44T S129L",3
"lib1","SARS-CoV-2","GATAGGATATACCTCC",2,1.62,NA,NA,NA,NA,NA,NA,"stop","F8* S43* N58* D97V S113I G174A",6
"lib1","SARS-CoV-2","GATAGGATTGGTCAAC",3,22.11,7.09,-3.68,0.29,1.5,1.17,0.03,">1 nonsynonymous","V37P F99T V182L",3
"lib1","SARS-CoV-2","GATAGGCCAACAATGT",2,11.79,6.27,-4.49,0.5,2.82,1.13,0.01,">1 nonsynonymous","G86N I104Q",2
"lib1","SARS-CoV-2","GATAGGCCGCGCCAAA",6,2.1,NA,NA,NA,NA,NA,NA,"stop","A33I K94L V115* S184G",4
"lib1","SARS-CoV-2","GATAGGCGATATAAAT",12,69.97,7.86,-2.91,0.24,1.5,1.11,0.02,">1 nonsynonymous","A81S N107L",2
"lib1","SARS-CoV-2","GATAGGCTACAAAATA",3,60.79,6.36,-4.4,0.28,1.5,1.12,0.01,">1 nonsynonymous","L60Y P161K",2
"lib1","SARS-CoV-2","GATAGGCTCAAGTACA",4,113.49,10.62,-0.15,0.08,2.88,1.09,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","GATAGGCTTACCGAGA",3,64.16,10.21,-0.55,0.06,2.81,1,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","GATAGGGATAAAAAAC",5,93.08,10.1,-0.67,0.07,2.67,1.02,0,">1 nonsynonymous","L57W K128L",2
"lib1","SARS-CoV-2","GATAGGGCAGACTGGA",7,53.07,6.73,-4.04,0.52,1.5,1.23,0.03,">1 nonsynonymous","A81T V103W",2
"lib1","SARS-CoV-2","GATAGGGTACATATTA",3,33.03,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6G F12P P96S",3
"lib1","SARS-CoV-2","GATAGGGTCTAGTGCA",5,46.99,10.02,-0.75,0.13,2.1,1.07,0.01,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","GATAGGTATCCGATCA",1,22.57,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S19F I80H S113L T201N",4
"lib1","SARS-CoV-2","GATAGGTATTCTCAAC",4,37.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10H Y35K C49M D90C S108H E154R T170I",7
"lib1","SARS-CoV-2","GATAGGTCTCTGCACA",2,3.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","GATAGGTTGGGCTATC",1,15.97,6.08,-4.68,0.56,3,1.18,0.01,">1 nonsynonymous","S43P D68Q",2
"lib1","SARS-CoV-2","GATAGTAGAGTTCAGC",2,98.47,10.72,-0.05,0.06,2.92,1.03,0,">1 nonsynonymous","I2P G146S",2
"lib1","SARS-CoV-2","GATAGTAGCAAAGCCG",3,53.4,10.46,-0.31,0.07,2.8,1.1,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","GATAGTAGCCCGACTT",1,10.77,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","A18N F70R T201I",3
"lib1","SARS-CoV-2","GATAGTATACTAAATT",3,38.37,9.82,-0.95,0.07,2.92,1.04,0,">1 nonsynonymous","G83M N118Y",2
"lib1","SARS-CoV-2","GATAGTATCTACATAC",8,51.01,7.64,-3.12,0.27,1.5,1.11,0.02,">1 nonsynonymous","N24R Y91Q K114I P149C",4
"lib1","SARS-CoV-2","GATAGTCAACGAATAG",8,20.57,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G9P V20R F134S Q144A",4
"lib1","SARS-CoV-2","GATAGTCACCGCCATA",16,352.93,6.46,-4.3,0.27,1.5,1.15,0.01,">1 nonsynonymous","K87M Y175L",2
"lib1","SARS-CoV-2","GATAGTCACTCTGGGA",6,101.92,8.36,-2.41,0.17,2.01,1.1,0.01,">1 nonsynonymous","L57V G117R P169R",3
"lib1","SARS-CoV-2","GATAGTCAGAAAGTAA",1,50.43,10.44,-0.32,0.09,2.85,1.02,0,">1 nonsynonymous","N4R P54Q P133S",3
"lib1","SARS-CoV-2","GATAGTCGAAACACAA",1,62.17,8.33,-2.44,0.14,2.59,1.05,0.01,">1 nonsynonymous","Y143I G155W T201M",3
"lib1","SARS-CoV-2","GATAGTCTCCGGTGCA",7,1.64,NA,NA,NA,NA,NA,NA,"stop","G101D T170*",2
"lib1","SARS-CoV-2","GATAGTGACAAGATTA",1,30.61,6,-4.76,1.59,1.5,1.17,0.03,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GATAGTGACCTCATAC",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114L R127H",2
"lib1","SARS-CoV-2","GATAGTGGGAAACCCG",15,3.17,NA,NA,NA,NA,NA,NA,"stop","Y35K P54* K87C",3
"lib1","SARS-CoV-2","GATAGTGGTAAGTATG",2,17.91,9.89,-0.88,0.1,2.39,1.03,0.01,">1 nonsynonymous","N130M L131F",2
"lib1","SARS-CoV-2","GATAGTGTGAAAGCCC",5,135.33,10.71,-0.05,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATAGTTCACCTAAAA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128G F134Y",2
"lib1","SARS-CoV-2","GATAGTTTCCACGCCA",2,5.57,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","W23A C31W F44L G86F",4
"lib1","SARS-CoV-2","GATATAAAAGGATAGC",1,0.23,NA,NA,NA,NA,NA,NA,"stop","A105* S129I",2
"lib1","SARS-CoV-2","GATATAAAATAAAACA",6,136.58,10.36,-0.4,0.05,2.85,1.04,0,">1 nonsynonymous","I28S G51N K56V L122K",4
"lib1","SARS-CoV-2","GATATAAAATTTTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F62L I72Q D112I L122* P161T",5
"lib1","SARS-CoV-2","GATATAAATATAACAA",1,5.24,8.38,-2.38,0.52,1.5,1,0.07,">1 nonsynonymous","D34L S53I L60I D97Y K128L E186T",6
"lib1","SARS-CoV-2","GATATAAATATTCTAA",7,4.66,NA,NA,NA,NA,NA,NA,"stop","G51D P82M Q176F S200*",4
"lib1","SARS-CoV-2","GATATAACCCGAAGCG",6,102.64,7.93,-2.84,0.19,1.62,1.09,0.01,">1 nonsynonymous","T55F Y66S N120L Q168L",4
"lib1","SARS-CoV-2","GATATAACTGCTGTCA",7,103.51,9.24,-1.53,0.11,2.63,1.13,0,">1 nonsynonymous","T85E S129K Q144C",3
"lib1","SARS-CoV-2","GATATAAGAAAATAAT",4,16.88,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S69E Q84M D112L F167T L183A",5
"lib1","SARS-CoV-2","GATATAAGCACAACCG",1,0.64,NA,NA,NA,NA,NA,NA,"stop","K26* T100L",2
"lib1","SARS-CoV-2","GATATAAGGTAAAGGC",4,53.33,9.43,-1.33,0.06,2.8,1.11,0,">1 nonsynonymous","N58K N118S E141K",3
"lib1","SARS-CoV-2","GATATAATAAACTTTG",1,54.88,10.41,-0.36,0.08,2.96,1,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","GATATAATCACTGTTG",6,45.46,9.96,-0.8,0.13,2.02,1.03,0.01,">1 nonsynonymous","K56L F99L",2
"lib1","SARS-CoV-2","GATATAATGGGTCAAA",8,109.67,10.71,-0.05,0.06,2.91,1.04,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","GATATAATTAAAAGAT",5,74.19,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A18E Y50T A89D R124Q N151S N157S K199S",7
"lib1","SARS-CoV-2","GATATAATTAAACATA",7,58.67,6.39,-4.37,0.74,1.5,1.28,0.04,">1 nonsynonymous","F8N S43P S139Y",3
"lib1","SARS-CoV-2","GATATAATTCATGACG",3,65.8,8.33,-2.44,0.11,2.22,1.12,0,">1 nonsynonymous","Y35R N64E Y119S I138N",4
"lib1","SARS-CoV-2","GATATACAAATATTTA",7,2.63,NA,NA,NA,NA,NA,NA,"stop","N13* K26Q T100E",3
"lib1","SARS-CoV-2","GATATACAATCTAGAT",1,7.81,7.53,-3.24,0.34,2,1.03,0.04,">1 nonsynonymous","R27L E141V G146V",3
"lib1","SARS-CoV-2","GATATACACCCTGAAG",1,73.82,9.82,-0.95,0.05,2.83,1.06,0,">1 nonsynonymous","N107D P197K",2
"lib1","SARS-CoV-2","GATATACACCTCGAAC",6,31.35,6.04,-4.73,0.63,1.5,1.09,0.01,">1 nonsynonymous","D98N V103T C150W",3
"lib1","SARS-CoV-2","GATATACACTAAGGAA",4,70.85,8.38,-2.38,0.1,2.41,1.09,0.01,">1 nonsynonymous","K94Q Y119M",2
"lib1","SARS-CoV-2","GATATACAGCCCATCA",1,54.4,9.92,-0.84,0.11,1.97,1.04,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","GATATACATGAACCGG",6,43.42,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","S36I K94N T148F G174F",4
"lib1","SARS-CoV-2","GATATACCATCTTTTC",2,20.31,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N58V V71L Y159G Q168M G174L",5
"lib1","SARS-CoV-2","GATATACCCAATCAAG",2,13.64,10.53,-0.24,0.11,2.86,1.02,0,">1 nonsynonymous","D98Y N130L",2
"lib1","SARS-CoV-2","GATATACCGACCAGCA",2,10.32,10.03,-0.73,0.12,2.81,1.03,0,"1 nonsynonymous","D34A",1
"lib1","SARS-CoV-2","GATATACCGGGGCGAG",2,89.19,6,-4.76,1,1.5,1.17,0.01,">1 nonsynonymous","F44I Y91S R127Q G146C",4
"lib1","SARS-CoV-2","GATATACCTCGGCCAG",1,14.03,10.01,-0.75,0.04,1.91,1,0,">1 nonsynonymous","S45V Y91N T100I",3
"lib1","SARS-CoV-2","GATATACCTGAACATA",1,59.09,9.93,-0.84,0.11,2.39,1.06,0,">1 nonsynonymous","D90I V173A",2
"lib1","SARS-CoV-2","GATATACCTTAAATAA",7,44.94,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","S29G L131P Q168P",3
"lib1","SARS-CoV-2","GATATACCTTCCGAGA",2,33.55,10.8,0.04,0.14,2.76,1.03,0.01,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","GATATACGATCGGGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59* K94I K114R F185S",4
"lib1","SARS-CoV-2","GATATACTAGAAGAAA",1,48.2,10.41,-0.35,0.06,2.78,1.08,0,">1 nonsynonymous","K56G D90L",2
"lib1","SARS-CoV-2","GATATACTGAGGCTCA",4,60.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72R V77M",2
"lib1","SARS-CoV-2","GATATACTGGAGTATT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","T15* R27E C61S Y91C",4
"lib1","SARS-CoV-2","GATATACTTTAAGATA",4,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152W",1
"lib1","SARS-CoV-2","GATATAGATGGGGCTT",4,91.62,10.15,-0.61,0.08,2.79,1,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","GATATAGCAAGTGTGC",1,13.59,10.45,-0.31,0.07,2.91,1,0.01,">1 nonsynonymous","P54H Y121L",2
"lib1","SARS-CoV-2","GATATAGGCATCGGCA",12,101.44,8.29,-2.47,0.19,1.53,1.19,0.01,">1 nonsynonymous","S43E C49L Y119R",3
"lib1","SARS-CoV-2","GATATAGGGTAAAAGG",3,55.1,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","Y39D N157I V173D G196N",4
"lib1","SARS-CoV-2","GATATAGTAAACCCGA",2,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y R124E",2
"lib1","SARS-CoV-2","GATATAGTACTGCCAA",11,66.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100C G146V R179A",3
"lib1","SARS-CoV-2","GATATAGTATGTCAAT",2,47.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49N N157T T201N",3
"lib1","SARS-CoV-2","GATATAGTCTTTGTAT",1,14.31,8.36,-2.41,0.14,2.01,1.08,0.01,">1 nonsynonymous","P7W F17Y P82Q V103D D112I E141P P149V",7
"lib1","SARS-CoV-2","GATATATAACAACGTA",7,47.34,6.93,-3.84,0.45,1.5,1.13,0.04,">1 nonsynonymous","R27F D59L K87E R127H G174K P197S",6
"lib1","SARS-CoV-2","GATATATAAGTCAACT",1,13.68,9.77,-0.99,0.06,2.85,1,0,">1 nonsynonymous","C6Y A42R N64D E154R",4
"lib1","SARS-CoV-2","GATATATAGACGACCT",4,35.82,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N107H K128T R136T K198G",4
"lib1","SARS-CoV-2","GATATATATATTGTGT",5,64.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P82K Q144L",2
"lib1","SARS-CoV-2","GATATATCAGCCAATT",5,36.86,9.99,-0.78,0.17,1.76,1.06,0.01,">1 nonsynonymous","N13R K26D C61S",3
"lib1","SARS-CoV-2","GATATATCCAAGTATC",1,21.18,10.77,0.01,0.13,2.82,1.05,0.01,"1 nonsynonymous","F8Y",1
"lib1","SARS-CoV-2","GATATATGGATTACAA",5,64.86,6.09,-4.67,1.39,1.5,1.2,0.05,">1 nonsynonymous","F8T D137F",2
"lib1","SARS-CoV-2","GATATATGGATTACAG",2,54.04,10.32,-0.45,0.09,2.77,1.06,0.01,">1 nonsynonymous","L60T A89S",2
"lib1","SARS-CoV-2","GATATATTAACGATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V71W P149*",2
"lib1","SARS-CoV-2","GATATATTCACAAGAT",2,86.68,10.72,-0.04,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATATATTGTGCCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61P F156* A190C S200H",4
"lib1","SARS-CoV-2","GATATCAAAGGCCGGA",10,2.75,NA,NA,NA,NA,NA,NA,"stop","F47S G116Y N151T Q163* G166H",5
"lib1","SARS-CoV-2","GATATCAAATCATAGT",6,91.79,10.74,-0.03,0.06,2.86,1.09,0,">1 nonsynonymous","K128R E141S",2
"lib1","SARS-CoV-2","GATATCAAGACGACAG",2,36.7,10.16,-0.61,0.08,2.91,1.02,0,">1 nonsynonymous","G9S Y121I A190V",3
"lib1","SARS-CoV-2","GATATCAAGTGCAAAA",5,92.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14Y Y119S G172Q",3
"lib1","SARS-CoV-2","GATATCACCACGGCCG",7,74.85,10.75,-0.01,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATATCACGCGCTTTG",14,69.88,7.01,-3.75,0.6,1.5,1.22,0.06,">1 nonsynonymous","V20M P96N C150S",3
"lib1","SARS-CoV-2","GATATCACGTGAATAA",1,18.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V52I I88D",2
"lib1","SARS-CoV-2","GATATCACTTAAACAA",6,962.47,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4L A18E A42E V52M P161N K198M",6
"lib1","SARS-CoV-2","GATATCAGCTCCACAA",7,43.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V52D Y93K R127N E135K",4
"lib1","SARS-CoV-2","GATATCAGGGATTAAA",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A N110L Y119S",3
"lib1","SARS-CoV-2","GATATCAGTTTAAGCC",3,74.64,10.57,-0.19,0.05,2.92,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","GATATCATATACCTGT",9,108.1,6.22,-4.55,0.78,1.5,1.25,0.04,">1 nonsynonymous","I2S R25A D34H K48L N118T Q176L",6
"lib1","SARS-CoV-2","GATATCATCTTCAAAG",3,11.91,7.52,-3.24,0.49,1.58,1.13,0.08,">1 nonsynonymous","G86S D137V Q163T",3
"lib1","SARS-CoV-2","GATATCATGACATTCA",4,62.3,6.18,-4.59,0.3,1.5,1.12,0,">1 nonsynonymous","F44I N64S I104A R124F G146F",5
"lib1","SARS-CoV-2","GATATCATGCTACTGG",1,30.92,10.39,-0.37,0.08,2.76,1,0,">1 nonsynonymous","T3A N64P D90S",3
"lib1","SARS-CoV-2","GATATCATTCGACTAT",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S V71G V77F",3
"lib1","SARS-CoV-2","GATATCCAACACTAGT",5,1.7,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GATATCCAGATGGTGA",1,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K L60V E141F",3
"lib1","SARS-CoV-2","GATATCCCTCTTCTCT",1,43.72,7.01,-3.76,0.16,1.69,1.14,0.01,">1 nonsynonymous","C6V G117A T148W",3
"lib1","SARS-CoV-2","GATATCCGAATACTTA",1,5.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H C102N N120W Y165A",4
"lib1","SARS-CoV-2","GATATCCGGTTAGTCT",6,145.88,10.34,-0.43,0.05,2.89,1,0,">1 nonsynonymous","K26V Y39P Y66L",3
"lib1","SARS-CoV-2","GATATCCTCATGAAGC",2,13.13,6.81,-3.95,0.38,1.5,1.13,0.03,">1 nonsynonymous","N58S F126P",2
"lib1","SARS-CoV-2","GATATCCTGGAATTTC",5,23.55,8.46,-2.31,0.15,2.48,1.14,0.01,">1 nonsynonymous","Y66L K87A S113C T201R",4
"lib1","SARS-CoV-2","GATATCGAATAGATCT",2,104.62,10.12,-0.64,0.03,2.89,1.03,0,">1 nonsynonymous","F44V E154P",2
"lib1","SARS-CoV-2","GATATCGATAACAAAT",3,41.72,8.42,-2.34,0.18,3,1,0.01,"1 nonsynonymous","F126N",1
"lib1","SARS-CoV-2","GATATCGCAAACTTCC",2,56.1,9.93,-0.83,0.13,2.19,1.05,0.01,"1 nonsynonymous","A18I",1
"lib1","SARS-CoV-2","GATATCGGGGGCAGGA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","F8* R25E G146E",3
"lib1","SARS-CoV-2","GATATCGTCCACGCGT",7,31.89,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L60S Y93T G101T K128I S139C N171L",6
"lib1","SARS-CoV-2","GATATCTAACAAAACA",1,23.4,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N120K Y175P E186I A192G T201R",5
"lib1","SARS-CoV-2","GATATCTACAACCAAA",4,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137F S147T V173F",3
"lib1","SARS-CoV-2","GATATCTATTAACTCC",1,21.58,10.47,-0.3,0.09,2.9,1.01,0.01,"1 nonsynonymous","K87I",1
"lib1","SARS-CoV-2","GATATCTATTGCAGAA",6,26.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V S43L T55D V77G I80K G86L C158Y",7
"lib1","SARS-CoV-2","GATATCTCACACAGCG",7,97.53,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4A A18G Y35R D59V R127E E141S",6
"lib1","SARS-CoV-2","GATATCTGTAGCCGAT",1,1.46,NA,NA,NA,NA,NA,NA,"stop","T3L G172L T201*",3
"lib1","SARS-CoV-2","GATATCTTCGCACACA",4,7.75,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","T15I N24I S36Q V103S P133H T201S",6
"lib1","SARS-CoV-2","GATATCTTCTACTGTT",1,812.48,10.65,-0.11,0.03,2.93,1.03,0,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","GATATCTTTCCTCCTT",4,173.68,9.3,-1.47,0.06,2.8,1.09,0,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","GATATGAAAAGTAAAC",5,28.64,7.29,-3.47,0.32,1.5,1.03,0.04,">1 nonsynonymous","D98I D112S Y119H",3
"lib1","SARS-CoV-2","GATATGAAATTACACA",2,14.76,6.43,-4.34,0.85,1.5,1.3,0.06,">1 nonsynonymous","F12R S45P",2
"lib1","SARS-CoV-2","GATATGAACCAGGAGA",9,115.39,9.15,-1.62,0.12,1.72,1.14,0.01,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","GATATGAACTAAAATA",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144H T170N",2
"lib1","SARS-CoV-2","GATATGAATAAATACA",1,27.7,6.55,-4.21,0.51,1.5,1.06,0.07,"1 nonsynonymous","N92P",1
"lib1","SARS-CoV-2","GATATGAATAACTTTA",5,29.29,6.32,-4.45,0.9,1.5,1.27,0.04,">1 nonsynonymous","Y21R S41F Y119H P133G N151P",5
"lib1","SARS-CoV-2","GATATGAATGAATAGA",6,59.83,10.55,-0.22,0.05,2.93,1,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","GATATGAATTGCGACT",2,37.79,10.72,-0.04,0.03,2.97,1.01,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","GATATGAATTGTGGGT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","R25* D68Q A81P",3
"lib1","SARS-CoV-2","GATATGACATAAGTGT",8,125.89,10.49,-0.28,0.04,2.9,1.02,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","GATATGACCAAAAAAG",3,19.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19T I88G F167L",3
"lib1","SARS-CoV-2","GATATGACCATCGCGG",4,1.37,NA,NA,NA,NA,NA,NA,"stop","E10* G86P T201M",3
"lib1","SARS-CoV-2","GATATGACTAGAAACA",6,54.02,8.33,-2.44,0.21,1.5,1.17,0.02,">1 nonsynonymous","S45L F62R T148D",3
"lib1","SARS-CoV-2","GATATGACTAGAAATA",4,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","GATATGAGCGAATGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S69Q K87Y S184*",3
"lib1","SARS-CoV-2","GATATGAGGGCAAAAA",3,68.25,7.94,-2.83,0.34,1.5,1.1,0.04,">1 nonsynonymous","F12W F44L R127N F156P",4
"lib1","SARS-CoV-2","GATATGAGTTGCACTA",2,30.93,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P7T G86C R124H K198L",4
"lib1","SARS-CoV-2","GATATGAGTTTACAAA",11,244.12,10.29,-0.47,0.05,2.79,1.03,0,"1 nonsynonymous","N13W",1
"lib1","SARS-CoV-2","GATATGATGGCTAGCG",11,4.52,NA,NA,NA,NA,NA,NA,"stop","F44R K56L V65E D97L D112* Y119M",6
"lib1","SARS-CoV-2","GATATGATGTCTTAAA",1,16.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6L S43I Q84N Q168L G174E",5
"lib1","SARS-CoV-2","GATATGATTGGCGTAT",8,1.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157F",1
"lib1","SARS-CoV-2","GATATGCAAAAGAGGT",1,15.65,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N4H E10W Y35V R136W Q163T",5
"lib1","SARS-CoV-2","GATATGCATATGACCA",13,156.14,10.44,-0.32,0.05,2.96,1,0,">1 nonsynonymous","I2L F44T",2
"lib1","SARS-CoV-2","GATATGCGAGATGGGG",7,198.1,9.89,-0.88,0.04,2.85,1.06,0,">1 nonsynonymous","Y119K T201N",2
"lib1","SARS-CoV-2","GATATGCGGTTTATAA",5,75.15,6.31,-4.46,0.65,1.5,1.25,0.02,">1 nonsynonymous","A105F S139M G155S",3
"lib1","SARS-CoV-2","GATATGCTAAATTATA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","C31* D90N V115F T140K",4
"lib1","SARS-CoV-2","GATATGCTAACCACTG",9,59.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4W A22K L60Y R179L K199T",5
"lib1","SARS-CoV-2","GATATGCTATCCCGCA",5,42.3,6,-4.76,1.46,1.5,1.26,0.03,">1 nonsynonymous","G9S D34R D97I A105H",4
"lib1","SARS-CoV-2","GATATGGAATGTACCG",1,34.38,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T140Y C158I",2
"lib1","SARS-CoV-2","GATATGGAATTTGCTC",2,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I P96I D112M",3
"lib1","SARS-CoV-2","GATATGGCCAATCATG",1,19.67,10.74,-0.02,0.12,2.94,1.01,0.01,"1 nonsynonymous","A22M",1
"lib1","SARS-CoV-2","GATATGGGTATACTCT",11,353.36,10.75,-0.01,0.05,2.94,1.04,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","GATATGGTACTGTGAG",6,4.45,NA,NA,NA,NA,NA,NA,"stop","Y39K D75* D90M",3
"lib1","SARS-CoV-2","GATATGGTAGAAAAAA",1,11.82,10.11,-0.66,0.17,2.95,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATATGGTAGAACACG",4,63.1,9.54,-1.22,0.17,1.7,1.09,0.01,">1 nonsynonymous","F8T I88V",2
"lib1","SARS-CoV-2","GATATGTACAATGATT",4,46.24,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","D90W G174A V180H",3
"lib1","SARS-CoV-2","GATATGTGCCAGTGCA",6,1.68,NA,NA,NA,NA,NA,NA,"stop","V37M F44P I72K K128* V173D",5
"lib1","SARS-CoV-2","GATATGTGCTCCAATC",1,12.46,10.61,-0.15,0.09,2.93,1.03,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","GATATGTGTTAAACAC",1,5.9,9.72,-1.05,0.16,2.73,1.07,0.02,">1 nonsynonymous","G9M F62Y K87E N130V",4
"lib1","SARS-CoV-2","GATATGTGTTCAAAAA",2,7.15,10.6,-0.17,0.07,2.97,1,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","GATATGTTACGCAATA",4,57.95,10.86,0.09,0.08,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATATGTTGCGACTAC",3,29.05,6.48,-4.28,0.5,1.5,1.21,0.02,">1 nonsynonymous","P96L V103L G152D",3
"lib1","SARS-CoV-2","GATATTAAAAGAATAT",1,17.49,8.28,-2.49,0.43,1.5,1.09,0.08,">1 nonsynonymous","F17A N40L T46M",3
"lib1","SARS-CoV-2","GATATTAAACGTCAGC",6,91.65,10.55,-0.21,0.06,2.94,1.03,0,">1 nonsynonymous","S29C V115S",2
"lib1","SARS-CoV-2","GATATTAAGGTTAAGT",4,25.63,7.25,-3.51,0.37,1.5,1.14,0.04,">1 nonsynonymous","C49F G174V",2
"lib1","SARS-CoV-2","GATATTAATTTGCAAA",1,76.84,10.5,-0.27,0.05,2.92,1.04,0,">1 nonsynonymous","K87R G152L",2
"lib1","SARS-CoV-2","GATATTACCGCAATAA",3,88.95,8.41,-2.35,0.12,2.38,1.15,0.01,">1 nonsynonymous","I2G G9M Y119R G146Y",4
"lib1","SARS-CoV-2","GATATTACGGCGGTGG",6,110.73,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","V37F N130R G172F T201L",4
"lib1","SARS-CoV-2","GATATTAGCAAACAAG",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W V103P C158S K198E",4
"lib1","SARS-CoV-2","GATATTATACACCTCT",15,4.66,NA,NA,NA,NA,NA,NA,"stop","F47R L122*",2
"lib1","SARS-CoV-2","GATATTATAGAAAAAC",5,59.26,10.57,-0.2,0.05,2.96,1.01,0,">1 nonsynonymous","T46L I138S",2
"lib1","SARS-CoV-2","GATATTATGAAAGCAT",1,25.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D112W S139T",2
"lib1","SARS-CoV-2","GATATTATTTATTTAC",1,34.42,10.76,-0.01,0.1,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATATTCAAACTTAAA",1,31.35,10.06,-0.71,0.11,2.47,1.02,0,">1 nonsynonymous","T15G Y91L",2
"lib1","SARS-CoV-2","GATATTCAATAAGTGG",3,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L Y119P N171S L183Q T201L",5
"lib1","SARS-CoV-2","GATATTCACATGTTGC",3,46.33,10.01,-0.75,0.16,2.23,1,0.01,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","GATATTCAGAAACAAA",4,48.56,10.65,-0.12,0.05,2.9,1.08,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","GATATTCATCATCTCC",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120F P133V V173P",3
"lib1","SARS-CoV-2","GATATTCATCCGAAAT",2,0.96,NA,NA,NA,NA,NA,NA,"stop","G9V V37T R73F P149*",4
"lib1","SARS-CoV-2","GATATTCCTATTGTAG",3,20.37,9.88,-0.88,0.08,2.96,1,0,">1 nonsynonymous","S45A N118D",2
"lib1","SARS-CoV-2","GATATTCGAATTGTTA",3,16.1,10.29,-0.48,0.11,2.8,1,0.01,"1 nonsynonymous","L183V",1
"lib1","SARS-CoV-2","GATATTCGATAGATAT",5,1.08,NA,NA,NA,NA,NA,NA,"stop","S29* V52S R136H",3
"lib1","SARS-CoV-2","GATATTCTCAAAAGAA",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R A14F T63E R78Y I104V E141C",6
"lib1","SARS-CoV-2","GATATTGAAACCAGCA",8,41.87,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","K56P K87Y V103A Y143F",4
"lib1","SARS-CoV-2","GATATTGAAATTGCTA",9,75.56,10.85,0.09,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATATTGAAGACTTAT",3,5.89,6,-4.76,2,3,1.02,0,">1 nonsynonymous","S41H V65G V71L T85V R136I L162M",6
"lib1","SARS-CoV-2","GATATTGAATAAACAT",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y V20S S43L V52H C61E P82V Y159H",7
"lib1","SARS-CoV-2","GATATTGAATGGTGAG",4,5.3,NA,NA,NA,NA,NA,NA,"stop","Y91* N118Q K128F",3
"lib1","SARS-CoV-2","GATATTGATATGAAAT",4,8.1,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","W106L Y159Q",2
"lib1","SARS-CoV-2","GATATTGGATTCTGAT",2,41.2,9.62,-1.14,0.13,1.69,1.15,0.01,">1 nonsynonymous","V37A K94L P149S",3
"lib1","SARS-CoV-2","GATATTGGTACGCGCT",3,4.11,NA,NA,NA,NA,NA,NA,"stop","N1S E10Y S19T D68* Q84K",5
"lib1","SARS-CoV-2","GATATTGTCATGAATG",3,12.66,8.53,-2.23,0.17,1.83,1.11,0.01,">1 nonsynonymous","F17D A42G V173A T201L",4
"lib1","SARS-CoV-2","GATATTGTGAACACTA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","K56N G86H D137* F160K",4
"lib1","SARS-CoV-2","GATATTGTGCTGGCCA",6,81.32,9.37,-1.39,0.1,1.93,1.14,0,">1 nonsynonymous","T55Y K128S R136I I142F",4
"lib1","SARS-CoV-2","GATATTGTTTAGCGCG",3,31.54,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F8W A33E D98Y I142S C150R",5
"lib1","SARS-CoV-2","GATATTTAAAAAAGGA",6,32.45,6,-4.76,1.05,3,1.08,0,">1 nonsynonymous","N107L L122P S164A K199L",4
"lib1","SARS-CoV-2","GATATTTACAAATATA",14,152.85,10.77,0,0.05,2.91,1.03,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","GATATTTACATGTCTC",3,34.29,8.2,-2.56,0.24,1.63,1.18,0.02,">1 nonsynonymous","I2H G86C",2
"lib1","SARS-CoV-2","GATATTTACATTAAGA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","R16V F44A F62C C102R G117P A145F Q176*",7
"lib1","SARS-CoV-2","GATATTTACCCGATAG",3,56.26,9.07,-1.69,0.07,2.76,1.15,0,">1 nonsynonymous","D98G E154Y K198N",3
"lib1","SARS-CoV-2","GATATTTAGTACATAG",4,40.42,9.94,-0.82,0.07,2.86,1.01,0,">1 nonsynonymous","G146Q H189G",2
"lib1","SARS-CoV-2","GATATTTAGTTAAGGG",9,20.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6L N92S N157C",3
"lib1","SARS-CoV-2","GATATTTCCCAAAAAG",6,23.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y119I P133S I142H",3
"lib1","SARS-CoV-2","GATATTTGATGAAATA",1,17.2,10.74,-0.02,0.06,2.84,1.11,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","GATATTTGTGACAAGC",2,21.98,10.01,-0.75,0.1,2.25,1.03,0.01,">1 nonsynonymous","F47C I138A P149Q",3
"lib1","SARS-CoV-2","GATATTTTAGCGACTG",2,18.72,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44Y R78V V103S D112C",4
"lib1","SARS-CoV-2","GATATTTTTAACTTAA",4,69.49,10.35,-0.42,0.03,2.96,1,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","GATCAAAAGAACCAAA",9,61.46,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","P54T F70N F126P P149Q P169Y Y175M",6
"lib1","SARS-CoV-2","GATCAAAAGATGTTGA",1,20.4,9.83,-0.94,0.14,2.63,1.21,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATCAAAAGATTTTAA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","A18W K26Q K87* G174W",4
"lib1","SARS-CoV-2","GATCAAAAGCAATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N D97V C102G N107I",4
"lib1","SARS-CoV-2","GATCAAACAGAACAAC",3,60.26,10.73,-0.04,0.03,2.93,1.04,0,">1 nonsynonymous","T3L D97M S200F",3
"lib1","SARS-CoV-2","GATCAAACCCTAACCT",4,14.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87R T100C S113A N120P Y165S",5
"lib1","SARS-CoV-2","GATCAAACGAATTGCA",2,24.13,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F99I Q144M G166F",3
"lib1","SARS-CoV-2","GATCAAAGAGTGCTCC",1,23.58,10.79,0.02,0.15,2.71,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATCAAAGATATTGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45H D68L F99P",3
"lib1","SARS-CoV-2","GATCAAAGGACTTATA",6,47.54,10.08,-0.68,0.12,2.41,1.03,0.01,"1 nonsynonymous","V11A",1
"lib1","SARS-CoV-2","GATCAAAGTACTTAAA",4,70.35,10.06,-0.7,0.09,2.54,1.05,0,">1 nonsynonymous","Q84K D90A S139D T201D",4
"lib1","SARS-CoV-2","GATCAAAGTATCACTG",2,33.43,10.25,-0.52,0.08,2.87,1.12,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","GATCAAAGTTTAGTCG",4,13.53,11.11,0.35,0.22,2.87,1.02,0.02,">1 nonsynonymous","G9N I104F",2
"lib1","SARS-CoV-2","GATCAAATGGTAATTT",3,113.51,8.23,-2.53,0.15,2.41,1.11,0.01,">1 nonsynonymous","I142N P149S G152P",3
"lib1","SARS-CoV-2","GATCAACAAGTTACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","E141F F167*",2
"lib1","SARS-CoV-2","GATCAACACTAGATTA",4,110.81,8.05,-2.72,0.22,1.57,1.19,0.02,">1 nonsynonymous","I2C I28L Y121G",3
"lib1","SARS-CoV-2","GATCAACATACAAGTG",7,105.77,9.44,-1.32,0.06,2.89,1.08,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","GATCAACCCAGTCAAC",2,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Q E135T C150F N171T",4
"lib1","SARS-CoV-2","GATCAACCCTATCCTA",1,30.7,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y35L F160A F167Q",3
"lib1","SARS-CoV-2","GATCAACCGAACCGAA",7,49.32,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14G Y35S A89R D97S N118E T148M G172F",7
"lib1","SARS-CoV-2","GATCAACCGCTCGCCA",2,64.97,10.81,0.05,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCAACGAGGGAATA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","A14D T55*",2
"lib1","SARS-CoV-2","GATCAACGCACTTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y Y21K V103F K114E N157P",5
"lib1","SARS-CoV-2","GATCAACTACCAGGCA",4,56.98,6,-4.76,1.7,1.5,1.16,0.02,">1 nonsynonymous","I28Y S41Y F47G S113L T201I",5
"lib1","SARS-CoV-2","GATCAACTTTAACGCC",5,31.17,8.74,-2.03,0.26,1.5,1.04,0.04,">1 nonsynonymous","C49V T85C",2
"lib1","SARS-CoV-2","GATCAAGAAAATGATA",2,23.7,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","R25N T100K R136Y",3
"lib1","SARS-CoV-2","GATCAAGAGACGTCTT",7,212.59,10.74,-0.03,0.06,2.92,1.03,0,">1 nonsynonymous","Y35L P149H",2
"lib1","SARS-CoV-2","GATCAAGCATTTAGGA",2,30.68,10.1,-0.67,0.15,2.13,1,0.01,"1 nonsynonymous","V11H",1
"lib1","SARS-CoV-2","GATCAAGTATGAGTGA",1,32.88,6,-4.76,2,3,1.16,0.03,">1 nonsynonymous","S41T S45Q P96L P161T",4
"lib1","SARS-CoV-2","GATCAAGTCATTTATA",1,63.85,8.99,-1.78,0.12,2.33,1.08,0.01,">1 nonsynonymous","A14V K128V F156M K198V",4
"lib1","SARS-CoV-2","GATCAAGTGACAATGA",1,17.91,10.16,-0.61,0.08,2.71,1.04,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","GATCAAGTGTAGCACG",2,20.67,8.31,-2.45,0.32,1.5,1.16,0.05,"1 nonsynonymous","G101C",1
"lib1","SARS-CoV-2","GATCAATAATAAATCA",7,68.89,8.11,-2.65,0.17,2.28,1.09,0.01,">1 nonsynonymous","L38S K87I F126Y",3
"lib1","SARS-CoV-2","GATCAATATAGCCCGC",3,29.54,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F62L D112S G146Q Y159L",4
"lib1","SARS-CoV-2","GATCAATATGAGTTCG",6,19.2,6.29,-4.48,0.37,1.5,1.11,0.01,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","GATCAATCACGGCAGC",4,41.25,10.63,-0.14,0.08,2.91,1.07,0,"1 nonsynonymous","P7A",1
"lib1","SARS-CoV-2","GATCAATCTGACTGTA",3,6.55,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C49Y V103R",2
"lib1","SARS-CoV-2","GATCAATGAGCGTTCT",11,110.68,10.79,0.03,0.06,2.95,1.02,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","GATCAATTAAATGAAG",2,39.06,10.21,-0.55,0.07,2.76,1.01,0,"1 nonsynonymous","I72T",1
"lib1","SARS-CoV-2","GATCAATTAACGAAGC",2,48.29,10.01,-0.75,0.08,2.68,1.02,0,">1 nonsynonymous","I2L T55K D97M P161S",4
"lib1","SARS-CoV-2","GATCAATTATAGACCC",1,30.64,6.44,-4.32,0.48,1.5,1.12,0.02,">1 nonsynonymous","A89V V115S Y175S",3
"lib1","SARS-CoV-2","GATCAATTCAATAAGA",2,67.7,9.05,-1.71,0.09,2.73,1.15,0,">1 nonsynonymous","F44V Y119H",2
"lib1","SARS-CoV-2","GATCAATTCGCCATAA",4,39.86,9.86,-0.91,0.09,2.55,1.03,0,">1 nonsynonymous","F17Y Y39S C61L",3
"lib1","SARS-CoV-2","GATCACAAAATCGTAG",1,5.42,6.15,-4.61,0.52,3,1.11,0.01,">1 nonsynonymous","W23E V32R G86R D98A V103Y",5
"lib1","SARS-CoV-2","GATCACAAAATTACAT",2,19.84,9.49,-1.27,0.36,1.5,1,0.08,">1 nonsynonymous","N40P C102L S147F",3
"lib1","SARS-CoV-2","GATCACAAAGTCAAGT",5,103.01,6,-4.76,0.65,1.5,1.12,0,">1 nonsynonymous","L60F G83C T100L Y119H F134N G146V S147A",7
"lib1","SARS-CoV-2","GATCACACCTTACTTA",3,17.96,7.45,-3.31,0.21,1.5,1.01,0.01,">1 nonsynonymous","F12W D68E",2
"lib1","SARS-CoV-2","GATCACACTCATTGAA",2,20.07,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G116L R127V Y165N",3
"lib1","SARS-CoV-2","GATCACAGGAGACTGT",3,36.56,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P82N S113R L131S T170K S200L",5
"lib1","SARS-CoV-2","GATCACATAAAAGAGT",2,9.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106G S139G",2
"lib1","SARS-CoV-2","GATCACATAAGGACCT",3,20.53,6,-4.76,2,3,1.21,0.08,">1 nonsynonymous","L95S N107R I138G G146T",4
"lib1","SARS-CoV-2","GATCACATTTTGTGCA",4,45.66,10.22,-0.54,0.05,2.89,1.07,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","GATCACCATTACAAGG",2,1.78,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","GATCACCCAAAAGCAA",1,43.7,10.84,0.08,0.1,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCACCGACGACTAA",14,38.22,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","C6A F62S A89R",3
"lib1","SARS-CoV-2","GATCACGAAAATATTC",2,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P C49G D112Y Q176S",4
"lib1","SARS-CoV-2","GATCACGAACACAAAA",2,24.98,10.52,-0.24,0.19,2.62,1.2,0.02,">1 nonsynonymous","F44S Y123K",2
"lib1","SARS-CoV-2","GATCACGACTACAAAG",3,55.07,10.65,-0.11,0.05,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCACGGGTCTTACT",4,96.75,6.94,-3.82,0.3,1.5,1.15,0.02,">1 nonsynonymous","C61R Y91N P133T",3
"lib1","SARS-CoV-2","GATCACGTGAACATAT",3,84.68,10.75,-0.01,0.07,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GATCACTAGCAATTAG",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Q Y50T A105L E186L",4
"lib1","SARS-CoV-2","GATCACTGCTATATAC",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S F70I D97T N107A Y159S",5
"lib1","SARS-CoV-2","GATCACTTATTCCGAT",7,88.82,9.51,-1.26,0.07,2.73,1.08,0,">1 nonsynonymous","D98M G146T",2
"lib1","SARS-CoV-2","GATCACTTCAAACTTT",1,15.52,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86V R127L",2
"lib1","SARS-CoV-2","GATCAGAAAATATTGA",1,51.14,9.87,-0.89,0.1,2.29,1.05,0,">1 nonsynonymous","Y35E F126L",2
"lib1","SARS-CoV-2","GATCAGAAAGAAATGA",1,164.51,9.92,-0.85,0.03,2.89,1.04,0,">1 nonsynonymous","I2P G146T K198G",3
"lib1","SARS-CoV-2","GATCAGAAATCTCTAG",3,62.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A89W K114C P149W P177L",4
"lib1","SARS-CoV-2","GATCAGAACTGACGTA",11,108.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R P82Q",2
"lib1","SARS-CoV-2","GATCAGAATTGTCTAG",5,30.62,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","F44Q G86R S139L G174L",4
"lib1","SARS-CoV-2","GATCAGACGATATTGC",2,2299.51,9.18,-1.58,0.05,2.84,1.08,0,">1 nonsynonymous","T170L L188P",2
"lib1","SARS-CoV-2","GATCAGATTTCTACAA",2,13.36,10.06,-0.71,0.21,2.31,1.08,0.02,">1 nonsynonymous","S41E L57C F160H S184T",4
"lib1","SARS-CoV-2","GATCAGATTTTTTATA",10,117.22,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","N92P",1
"lib1","SARS-CoV-2","GATCAGCAGATTTTTA",3,45.79,6.6,-4.17,0.48,1.5,1.18,0.03,">1 nonsynonymous","G51F W106G R179T",3
"lib1","SARS-CoV-2","GATCAGCATCACACTA",3,1.9,NA,NA,NA,NA,NA,NA,"stop","A14L V153* F167V",3
"lib1","SARS-CoV-2","GATCAGCATTCACCAG",7,115.1,8.41,-2.35,0.16,1.58,1.15,0.01,">1 nonsynonymous","G9K P54L Q176R L187W",4
"lib1","SARS-CoV-2","GATCAGCCATGCATAG",10,54.59,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","E10L G116W D137R",3
"lib1","SARS-CoV-2","GATCAGGCCATCGGTA",3,14.87,9.8,-0.96,0.18,2.03,1.03,0.01,">1 nonsynonymous","S43A P82K",2
"lib1","SARS-CoV-2","GATCAGGGATTAGTGA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","C61S V103* N120* R136S",4
"lib1","SARS-CoV-2","GATCAGGTGATACCAT",1,23.95,8.06,-2.71,0.33,1.84,1.23,0.04,">1 nonsynonymous","P82L K128P",2
"lib1","SARS-CoV-2","GATCAGTAGAGCTGGC",1,10.25,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D34L G86I A105C T201Y",4
"lib1","SARS-CoV-2","GATCAGTCCTTACGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41V R127* P191*",3
"lib1","SARS-CoV-2","GATCAGTGTGCGGCAG",10,124.92,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V37G F44I N58K G86R P149G",5
"lib1","SARS-CoV-2","GATCAGTTAATGCAAC",3,21.87,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K56L T63G A89F A105T N130R E141T",6
"lib1","SARS-CoV-2","GATCAGTTACTAGATA",2,22.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G116E N130I D137Y G155I",4
"lib1","SARS-CoV-2","GATCATAAAACTAAAT",6,604.34,9.54,-1.23,0.1,1.86,1.1,0,">1 nonsynonymous","Y91Q T100N",2
"lib1","SARS-CoV-2","GATCATAAACCTTAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L D90R Y119L K132N P161L",5
"lib1","SARS-CoV-2","GATCATAACAAAAAAT",4,32.87,7.24,-3.53,0.15,1.94,1.16,0.01,">1 nonsynonymous","C6S V11M G83S Y119R T201W",5
"lib1","SARS-CoV-2","GATCATAACAGACTCT",4,0.46,NA,NA,NA,NA,NA,NA,"stop","N1* K56F",2
"lib1","SARS-CoV-2","GATCATAACCTATCGT",12,59.1,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K26L G101R C158L",3
"lib1","SARS-CoV-2","GATCATAACGTAGATT",1,30.91,9.33,-1.44,0.08,1.9,1.03,0,">1 nonsynonymous","F17T A42G S139G",3
"lib1","SARS-CoV-2","GATCATAACTTTGCGC",5,44.94,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","V65K P82T D90A P161Q",4
"lib1","SARS-CoV-2","GATCATACACACCAGT",4,71.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2A R124F L188Y",3
"lib1","SARS-CoV-2","GATCATACCCTCTTGA",3,45.68,10.16,-0.61,0.07,2.88,1.05,0,">1 nonsynonymous","F44N L122G",2
"lib1","SARS-CoV-2","GATCATACGACAAAAA",3,50.82,10.56,-0.21,0.06,2.89,1.08,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","GATCATACTATTCTAG",8,131.09,7.39,-3.38,0.27,1.5,1.17,0.02,">1 nonsynonymous","Y66S D112V T201L",3
"lib1","SARS-CoV-2","GATCATAGAAGAGTTC",6,144.54,9.97,-0.79,0.1,2.04,1.03,0,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","GATCATAGATCATGAT",7,88.33,8.22,-2.54,0.27,1.5,1.09,0.02,">1 nonsynonymous","D97S Y178D",2
"lib1","SARS-CoV-2","GATCATATAAAGAGCA",4,61.6,10.81,0.04,0.06,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCATATATAACCTA",2,31.31,10.09,-0.67,0.11,2.74,1.12,0.01,">1 nonsynonymous","Y91M T148I",2
"lib1","SARS-CoV-2","GATCATATGTAAGTTG",1,5.7,6.91,-3.85,0.47,2.96,1.26,0.02,">1 nonsynonymous","T15L N40I L60C D98Y N151A",5
"lib1","SARS-CoV-2","GATCATATTCAACTGT",1,40.38,10.56,-0.2,0.08,2.95,1,0,">1 nonsynonymous","S36M Q168R",2
"lib1","SARS-CoV-2","GATCATCAAAAAAATA",5,45.23,8.26,-2.5,0.14,1.6,1.16,0.01,">1 nonsynonymous","A14R P54L N107T V153G T201S",5
"lib1","SARS-CoV-2","GATCATCAAATAAACT",1,7.5,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","A14E D90C V103L G116R L122P E141K Q168R S200L",8
"lib1","SARS-CoV-2","GATCATCAACATACCC",1,2.27,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","GATCATCACAATCAAA",1,13.65,10.85,0.08,0.09,2.86,1.05,0,">1 nonsynonymous","S129T T201L",2
"lib1","SARS-CoV-2","GATCATCATAAGAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60N G83R",2
"lib1","SARS-CoV-2","GATCATCCGACTCCTT",2,8.29,11.02,0.26,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCATCTAACATTTA",1,38.72,10.02,-0.75,0.11,2.6,1.08,0,">1 nonsynonymous","F44W N92S",2
"lib1","SARS-CoV-2","GATCATCTACAGATAG",12,3007.62,10.49,-0.28,0.03,2.93,1.01,0,">1 nonsynonymous","S41V V115N",2
"lib1","SARS-CoV-2","GATCATGAAACCATAA",1,16.01,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12K L95R F185L S200L",4
"lib1","SARS-CoV-2","GATCATGAATACAACT",7,21.32,6,-4.76,2,1.5,1.38,0.05,">1 nonsynonymous","C49S D137V",2
"lib1","SARS-CoV-2","GATCATGACAACCGGC",9,277.24,10.64,-0.12,0.04,2.96,1.02,0,">1 nonsynonymous","F44V T100Y L188T",3
"lib1","SARS-CoV-2","GATCATGATGCAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* Y91F N110L L131P",4
"lib1","SARS-CoV-2","GATCATGCAGGCATGT",3,73.84,10.72,-0.05,0.11,2.83,1.02,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","GATCATGCCTGTATAG",2,22.17,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N4L S36L C49H G174L",4
"lib1","SARS-CoV-2","GATCATGCGTGTATGT",3,23.44,10.89,0.13,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCATGTCAATACAT",5,1.07,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","GATCATGTTGTGTTGA",6,114.17,7.07,-3.7,0.15,1.54,1.13,0.01,">1 nonsynonymous","S43P C150S",2
"lib1","SARS-CoV-2","GATCATTAAGTGAACT",8,639.24,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G9S V37T A42Q G86I N92I",5
"lib1","SARS-CoV-2","GATCATTATAAACACG",2,46.5,8.36,-2.41,0.15,2.43,1.11,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","GATCATTATCTAAACA",6,2456.61,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19L K56D A145G S164L",4
"lib1","SARS-CoV-2","GATCATTCAAGGACAC",10,2.12,NA,NA,NA,NA,NA,NA,"stop","I2* N64G",2
"lib1","SARS-CoV-2","GATCATTCTGAACGTA",1,9.64,8.6,-2.16,0.19,1.5,1,0.02,">1 nonsynonymous","S43R D112K",2
"lib1","SARS-CoV-2","GATCATTCTTATATAA",3,29.8,6.13,-4.64,1.07,1.5,1.21,0.03,">1 nonsynonymous","T85M N107F",2
"lib1","SARS-CoV-2","GATCATTCTTGGGTCA",1,3.7,NA,NA,NA,NA,NA,NA,"stop","R16S L95W D98T Y175I K198*",5
"lib1","SARS-CoV-2","GATCATTGCAAAAGGG",3,93.28,8.19,-2.57,0.18,1.73,1.18,0.01,">1 nonsynonymous","C61E E135T G146Y",3
"lib1","SARS-CoV-2","GATCATTGCCCGCGCC",8,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R L122M",2
"lib1","SARS-CoV-2","GATCATTTCATCATTA",7,65.64,6,-4.76,1.89,1.5,1.15,0.03,">1 nonsynonymous","T85L N92C",2
"lib1","SARS-CoV-2","GATCATTTGAGCAGCA",6,52.26,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D90C F99A",2
"lib1","SARS-CoV-2","GATCCAAATATTCGGA",2,14.93,6.6,-4.17,0.74,1.5,1.15,0.07,">1 nonsynonymous","G83D N107D G146W",3
"lib1","SARS-CoV-2","GATCCAACAACTCTTC",3,1.89,NA,NA,NA,NA,NA,NA,"stop","E186*",1
"lib1","SARS-CoV-2","GATCCAATAAACATAT",2,26.73,10.64,-0.12,0.06,2.95,1.02,0,">1 nonsynonymous","I2S E10L T201K",3
"lib1","SARS-CoV-2","GATCCACAATACAATT",2,13.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F156S P177M V182T",3
"lib1","SARS-CoV-2","GATCCACATGACAAAG",3,50.87,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C49K E76S",2
"lib1","SARS-CoV-2","GATCCACCGTGAAGCG",1,35.17,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","Y39K L125R S147G F167T",4
"lib1","SARS-CoV-2","GATCCACTCAGAACGC",9,245.53,10.76,0,0.07,2.88,1.06,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","GATCCACTCTATGGGA",2,19,10.57,-0.2,0.09,2.76,1.04,0,"1 nonsynonymous","D90E",1
"lib1","SARS-CoV-2","GATCCAGCAAGGTGTG",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149L Y178H",2
"lib1","SARS-CoV-2","GATCCAGCAGGTCACC",2,0,NA,NA,NA,NA,NA,NA,"stop","P7A P54E I72V A89P A105K R127C Y178* C195S K199*",9
"lib1","SARS-CoV-2","GATCCAGGCACTCGAA",1,9.56,10,-0.76,0.22,2.63,1,0.02,">1 nonsynonymous","D34S K48M",2
"lib1","SARS-CoV-2","GATCCAGTACCTGAAC",4,7.78,10.9,0.14,0.11,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCCAGTAGCATGCT",8,78.13,8.86,-1.9,0.11,2.67,1.09,0,">1 nonsynonymous","R16M N64G N157S",3
"lib1","SARS-CoV-2","GATCCATAACATACCT",2,16.99,10.32,-0.45,0.08,2.88,1.01,0,">1 nonsynonymous","T55F Q84L",2
"lib1","SARS-CoV-2","GATCCATAATGCTGCA",6,73.26,9.01,-1.76,0.08,2.34,1.13,0,">1 nonsynonymous","N118V P149C",2
"lib1","SARS-CoV-2","GATCCATACTATCTAT",4,34.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F44M S113V",2
"lib1","SARS-CoV-2","GATCCATAGAAAACTT",4,25.19,10.37,-0.4,0.08,2.77,1,0,">1 nonsynonymous","I2P A18W",2
"lib1","SARS-CoV-2","GATCCATCACTGATTC",4,68.83,10.59,-0.18,0.04,2.94,1.02,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","GATCCATGGATAGGCG",1,25.47,10.83,0.06,0.08,2.98,1,0,">1 nonsynonymous","L5T K199Q",2
"lib1","SARS-CoV-2","GATCCCAAACCCCAGA",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V P96A R136W F156S P177L",5
"lib1","SARS-CoV-2","GATCCCAACCGTCTCG",6,57.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L E141Q G146N",3
"lib1","SARS-CoV-2","GATCCCATAACAAGAG",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F L5P F17M A33Y D90S N130D E141F N151Y",8
"lib1","SARS-CoV-2","GATCCCATCAATTAAG",10,83.81,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68W Y91L V115K P169S",4
"lib1","SARS-CoV-2","GATCCCCCCTCAATAG",6,80,10.74,-0.03,0.06,2.87,1.07,0,">1 nonsynonymous","N1E P149R",2
"lib1","SARS-CoV-2","GATCCCCGTATCTTTA",8,28.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68K A89H G101L S129V R136L",5
"lib1","SARS-CoV-2","GATCCCCTGTCGTAAT",19,10.12,NA,NA,NA,NA,NA,NA,"stop","G146* V173*",2
"lib1","SARS-CoV-2","GATCCCGAAGCCTTCA",3,12.12,7.82,-2.95,0.32,1.5,1,0.05,">1 nonsynonymous","S43L A89E",2
"lib1","SARS-CoV-2","GATCCCGTATCTGCGT",4,72.69,10.12,-0.65,0.08,2.53,1.04,0,"1 nonsynonymous","A67S",1
"lib1","SARS-CoV-2","GATCCCTCTTCACAAA",2,10.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N58S V77S A105H L122E T201W",5
"lib1","SARS-CoV-2","GATCCCTGACAAAAGG",7,2.14,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib1","SARS-CoV-2","GATCCCTTAGTATATT",3,25.03,6,-4.76,2,3,1.12,0,">1 nonsynonymous","E10G C49I L131Q P169H",4
"lib1","SARS-CoV-2","GATCCCTTTCCAATCG",1,32.81,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G51W Y93L S200H",3
"lib1","SARS-CoV-2","GATCCGAACAGTTTAC",1,8.14,10.75,-0.01,0.03,3,1,0,"1 nonsynonymous","N40H",1
"lib1","SARS-CoV-2","GATCCGAAGAGTAGAT",1,46.23,10.64,-0.13,0.04,2.8,1.01,0,"1 nonsynonymous","S139M",1
"lib1","SARS-CoV-2","GATCCGACAAACCCCC",5,15.13,6.06,-4.7,0.54,1.5,1.11,0.01,">1 nonsynonymous","C6L Y39M G83I P149E",4
"lib1","SARS-CoV-2","GATCCGACACAACGCC",3,48.79,8.83,-1.93,0.14,2.55,1.11,0.01,">1 nonsynonymous","I142K G152I",2
"lib1","SARS-CoV-2","GATCCGACATCACTAA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L P169C",2
"lib1","SARS-CoV-2","GATCCGACTAGAATAG",11,207.33,10.72,-0.04,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCCGACTTGCAAAG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","D34P D97I R136Y Q163* F167P",5
"lib1","SARS-CoV-2","GATCCGAGACCATAAT",7,31.49,6,-4.76,2,1.5,1.26,0.05,"1 nonsynonymous","D68C",1
"lib1","SARS-CoV-2","GATCCGAGCAAACTAC",4,96.96,10.39,-0.37,0.04,2.9,1.04,0,"1 nonsynonymous","Y35A",1
"lib1","SARS-CoV-2","GATCCGCCAAATCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R73* K128C",2
"lib1","SARS-CoV-2","GATCCGCCCAACCAAA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","Y39* C61M P82T L122G",4
"lib1","SARS-CoV-2","GATCCGCCGTGCTCGG",1,9.89,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","G9S V71R",2
"lib1","SARS-CoV-2","GATCCGCCTTATTTGG",2,53.25,10.56,-0.21,0.07,2.93,1.02,0,">1 nonsynonymous","Y178W A190M",2
"lib1","SARS-CoV-2","GATCCGCTATTCCTCT",3,46.36,6.05,-4.72,1.09,1.5,1.26,0.02,">1 nonsynonymous","F8Q N40V P149R S200F",4
"lib1","SARS-CoV-2","GATCCGGGATTACTCG",2,8.57,NA,NA,NA,NA,NA,NA,"stop","A14* Q84N I104M N157I",4
"lib1","SARS-CoV-2","GATCCGGGCGGCTCTG",8,64.4,8.42,-2.34,0.2,1.5,1.15,0.02,">1 nonsynonymous","S19E F62S S184I",3
"lib1","SARS-CoV-2","GATCCGTTAAATGCCG",3,9.13,9.62,-1.14,0.29,1.6,1.28,0.02,">1 nonsynonymous","C6K A67I E141N E154S Y178H",5
"lib1","SARS-CoV-2","GATCCTAAGAAGCAAA",2,0.01,NA,NA,NA,NA,NA,NA,"stop","N40D Y91L F134*",3
"lib1","SARS-CoV-2","GATCCTACGATAGCAT",7,46.65,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","I104Y T170Y P177W T201H",4
"lib1","SARS-CoV-2","GATCCTAGAAATATGT",12,103.83,8.41,-2.35,0.12,2.81,1.06,0.01,">1 nonsynonymous","T170I G196R",2
"lib1","SARS-CoV-2","GATCCTAGAATGTCAG",4,81.48,10.8,0.04,0.07,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GATCCTAGGTTCATCG",2,34.1,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y66E I80K I88G G155S",4
"lib1","SARS-CoV-2","GATCCTATAGAAATCA",7,96.9,10.68,-0.09,0.05,2.95,1.03,0,"1 nonsynonymous","N110L",1
"lib1","SARS-CoV-2","GATCCTATCCTCGATT",7,109.03,6,-4.76,1.91,1.5,1.14,0,">1 nonsynonymous","V153A C158S F167G",3
"lib1","SARS-CoV-2","GATCCTCAAACTTAAA",7,51.73,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D34A C102R I104V",3
"lib1","SARS-CoV-2","GATCCTCCATCAAACG",3,11.92,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N13L N24V F70N G116T",4
"lib1","SARS-CoV-2","GATCCTCTATTAAAAA",7,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L P96K A105S S139Y V173C",5
"lib1","SARS-CoV-2","GATCCTGAATTTACCT",6,68.23,10.77,0.01,0.07,2.91,1.05,0,"1 nonsynonymous","G196S",1
"lib1","SARS-CoV-2","GATCCTGCACAGCCTA",2,23.21,10.48,-0.28,0.05,2.95,1.04,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","GATCCTGCCCAGCAAA",1,7.32,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","E76R W106V V115M K132V T148M",5
"lib1","SARS-CoV-2","GATCCTGCTCCCACGA",16,127.44,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","G83I G101A F134L",3
"lib1","SARS-CoV-2","GATCCTGGCTACAACA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","A14V T55I A89V I104* C150T",5
"lib1","SARS-CoV-2","GATCCTGTACGGAAAA",2,71.4,10.07,-0.69,0.06,2.82,1,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","GATCCTGTGAGATATA",1,48.16,10.62,-0.14,0.03,2.93,1.04,0,">1 nonsynonymous","N1R D59R",2
"lib1","SARS-CoV-2","GATCCTTATAACAACC",2,15.44,8.12,-2.65,0.45,1.5,1.11,0.07,"1 nonsynonymous","D68N",1
"lib1","SARS-CoV-2","GATCCTTCATTAAATC",5,62.69,10.84,0.07,0.08,2.93,1.02,0,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","GATCCTTTGAAATCGG",1,11.12,9.39,-1.37,0.27,1.9,1.05,0.03,">1 nonsynonymous","S29R S53L Y91V",3
"lib1","SARS-CoV-2","GATCGAAAACTAAAAA",2,71.8,6.32,-4.45,0.36,1.5,1.09,0.01,">1 nonsynonymous","F44T Y50H Y119W Q176R",4
"lib1","SARS-CoV-2","GATCGAAATTTCTGAA",5,104.7,8.26,-2.51,0.21,1.66,1.17,0.02,"1 nonsynonymous","D112A",1
"lib1","SARS-CoV-2","GATCGAAGAAAACACA",3,42.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S19E A89S I138Y V180T",4
"lib1","SARS-CoV-2","GATCGAAGGAATTTGA",1,15.48,10.41,-0.35,0.12,2.7,1.03,0.01,">1 nonsynonymous","N1Y A42W S129V",3
"lib1","SARS-CoV-2","GATCGAAGGAGAAAAC",7,1.33,NA,NA,NA,NA,NA,NA,"stop","E141P P149C G172* K198A",4
"lib1","SARS-CoV-2","GATCGAATAACATTAT",7,1.37,NA,NA,NA,NA,NA,NA,"stop","V37* L95K N130P F156Y",4
"lib1","SARS-CoV-2","GATCGAATAGCAACAA",2,61.41,10.04,-0.73,0.14,2.57,1.02,0.01,">1 nonsynonymous","N40K P54T K128L K132M",4
"lib1","SARS-CoV-2","GATCGAATATTACAAA",4,132.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39E G83P Y143L Q176S",4
"lib1","SARS-CoV-2","GATCGAATATTTTTGG",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W N107Q K128E E141K V180E",5
"lib1","SARS-CoV-2","GATCGAATCACTGGGT",4,52.74,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G51C V71K D98L L122C",4
"lib1","SARS-CoV-2","GATCGAATGCGTGCAA",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25T G51N K87T L95R S108L K132P",6
"lib1","SARS-CoV-2","GATCGAATGTATAAGT",1,5.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y35S D90K N107H",3
"lib1","SARS-CoV-2","GATCGACAGCTTTCAC",1,82.24,10.41,-0.35,0.06,2.85,1.06,0,">1 nonsynonymous","A33I D59Q",2
"lib1","SARS-CoV-2","GATCGACATAACGTAT",1,29.38,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G51V N107H S113D Y119R K128V P161F",6
"lib1","SARS-CoV-2","GATCGACCAAACCTAA",3,91.33,10.49,-0.27,0.05,2.91,1.02,0,"1 nonsynonymous","D98W",1
"lib1","SARS-CoV-2","GATCGACTAACAAGGT",4,37.4,10.05,-0.71,0.06,2.65,1.02,0,">1 nonsynonymous","L5R S43V T63F D90R",4
"lib1","SARS-CoV-2","GATCGACTAGCGACCA",3,55.27,9.01,-1.76,0.19,1.5,1.08,0.01,"1 nonsynonymous","P82Q",1
"lib1","SARS-CoV-2","GATCGAGAAGAGGCTA",9,8.04,NA,NA,NA,NA,NA,NA,"stop","S29G I72K V115F Y165*",4
"lib1","SARS-CoV-2","GATCGAGATCATTACA",5,77.54,9.96,-0.8,0.07,2.78,1.03,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","GATCGATATAAGATAA",9,86.17,10.3,-0.47,0.05,2.84,1.03,0,">1 nonsynonymous","N13S I138C",2
"lib1","SARS-CoV-2","GATCGATTTCTTTAGG",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y Y93I K128M C158D L162S",5
"lib1","SARS-CoV-2","GATCGCAAAGAACACC",7,70.23,7.96,-2.81,0.28,1.5,1.17,0.03,">1 nonsynonymous","F99I N118A",2
"lib1","SARS-CoV-2","GATCGCAGCAAAGTCT",7,13.36,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A42P C49S F70L",3
"lib1","SARS-CoV-2","GATCGCAGTAACTAAT",5,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N D90M Q144M",3
"lib1","SARS-CoV-2","GATCGCCGTTAACACC",1,16.75,10.76,0,0.1,2.89,1.09,0,"1 nonsynonymous","L187T",1
"lib1","SARS-CoV-2","GATCGCGGTTGCTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S Y119*",2
"lib1","SARS-CoV-2","GATCGCTAGCATGAAT",9,31.65,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","V71G K132N Y143N",3
"lib1","SARS-CoV-2","GATCGCTCTATTCCAC",1,0.22,NA,NA,NA,NA,NA,NA,"stop","R27G C61Y Y93* R136F S147V",5
"lib1","SARS-CoV-2","GATCGCTGAAGCTATA",3,91.6,10.63,-0.13,0.04,2.88,1.04,0,">1 nonsynonymous","T55P N130C H189P",3
"lib1","SARS-CoV-2","GATCGCTGCACCGGCT",5,99.61,10.33,-0.43,0.04,2.85,1.01,0,">1 nonsynonymous","F62D T140A",2
"lib1","SARS-CoV-2","GATCGGAATGCAATAA",6,1.88,NA,NA,NA,NA,NA,NA,"stop","T85S N130*",2
"lib1","SARS-CoV-2","GATCGGACGCATTTCA",1,21.82,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","D68K G146W",2
"lib1","SARS-CoV-2","GATCGGAGAAATGCTT",14,84.47,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","I2F T63M N130H Y175I V181L",5
"lib1","SARS-CoV-2","GATCGGATTTAAAATT",4,92.52,10.6,-0.16,0.06,2.92,1.02,0,">1 nonsynonymous","L5N F160L",2
"lib1","SARS-CoV-2","GATCGGCATCCCAAAC",8,160.13,9.07,-1.69,0.09,1.95,1.1,0,">1 nonsynonymous","G51R D75P",2
"lib1","SARS-CoV-2","GATCGGCCAACAGACT",5,16.13,6.16,-4.6,0.45,1.93,1.08,0.01,">1 nonsynonymous","N58F D98T R136E Y159I G174M",5
"lib1","SARS-CoV-2","GATCGGCGATATGACA",2,44.73,10.02,-0.75,0.15,2.17,1,0.01,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","GATCGGGAGAATAATA",2,5.7,11.06,0.29,0.16,2.94,1.01,0,"1 nonsynonymous","N24T",1
"lib1","SARS-CoV-2","GATCGGGTAAAGATCA",3,50.17,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V65R Y91S G166T C195V",4
"lib1","SARS-CoV-2","GATCGGTAAAATGAAA",1,24.15,10.7,-0.06,0.07,2.84,1.1,0,">1 nonsynonymous","L122W S139N",2
"lib1","SARS-CoV-2","GATCGTACTCAGCAAA",4,17.71,10.36,-0.41,0.06,2.96,1.03,0,">1 nonsynonymous","I2G Y35M K87T E141N T201D",5
"lib1","SARS-CoV-2","GATCGTAGATTATCGC",7,0.51,NA,NA,NA,NA,NA,NA,"stop","N4* I80T D97V",3
"lib1","SARS-CoV-2","GATCGTAGTACCCAAC",1,20.93,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D112W K128A E135S",3
"lib1","SARS-CoV-2","GATCGTCAGCAACACA",2,0,NA,NA,NA,NA,NA,NA,"stop","K48* C158F",2
"lib1","SARS-CoV-2","GATCGTGCCATCAGCA",4,88.24,10.33,-0.43,0.06,2.93,1,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","GATCGTGCTAATATGC",5,82.88,10.53,-0.23,0.07,2.82,1.07,0,">1 nonsynonymous","V173L S184E",2
"lib1","SARS-CoV-2","GATCGTTACAATCAAT",2,133.94,10.72,-0.04,0.05,2.91,1.06,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","GATCGTTCGACGAAAT",2,19.39,6,-4.76,1.04,1.5,1.17,0.01,">1 nonsynonymous","R127Q Y159N",2
"lib1","SARS-CoV-2","GATCGTTCTAATATTG",4,55.86,10.29,-0.47,0.05,2.95,1,0,">1 nonsynonymous","N4L N171Q",2
"lib1","SARS-CoV-2","GATCGTTTAGCGTGAG",2,154.24,10.82,0.06,0.07,2.9,1.05,0,"1 nonsynonymous","L60Y",1
"lib1","SARS-CoV-2","GATCGTTTATGTACAG",8,25.18,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F12W F62S K94F I138M S164N G172V",6
"lib1","SARS-CoV-2","GATCGTTTTATCCACA",5,123.69,8.47,-2.29,0.1,2.52,1.08,0,">1 nonsynonymous","N4M S113Q T201F",3
"lib1","SARS-CoV-2","GATCTAAAAACAGTGC",1,14.22,6.01,-4.76,1.37,1.5,1.13,0.04,">1 nonsynonymous","Q79T K87E T140F",3
"lib1","SARS-CoV-2","GATCTAAAACTTTGAC",3,141.45,10.35,-0.41,0.03,2.93,1.03,0,">1 nonsynonymous","I2Q G174T",2
"lib1","SARS-CoV-2","GATCTAAATTAGTTGG",5,66,10.78,0.02,0.05,2.92,1.03,0,">1 nonsynonymous","K56S L122N",2
"lib1","SARS-CoV-2","GATCTAACCCGTAGAA",3,6.29,10.75,-0.01,0.07,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCTAACCTAGAAGG",3,31.24,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","A18S C49G S139P G174V",4
"lib1","SARS-CoV-2","GATCTAACTAAAGTGT",7,3.02,NA,NA,NA,NA,NA,NA,"stop","F44E Y123*",2
"lib1","SARS-CoV-2","GATCTAATAAAAAACG",4,1.15,NA,NA,NA,NA,NA,NA,"stop","F44* N64V V103Q I138M",4
"lib1","SARS-CoV-2","GATCTAATAGTGTAAT",10,2.13,NA,NA,NA,NA,NA,NA,"stop","C6T D90C K94*",3
"lib1","SARS-CoV-2","GATCTAATATATGGCC",1,11.27,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","G51Y L95K",2
"lib1","SARS-CoV-2","GATCTAATTGCGACCA",5,71.9,10.72,-0.04,0.08,2.9,1.08,0,">1 nonsynonymous","S129M K198G",2
"lib1","SARS-CoV-2","GATCTACAATCCAATT",2,29.45,10.24,-0.52,0.04,2.97,1.01,0,">1 nonsynonymous","Y35M G174R",2
"lib1","SARS-CoV-2","GATCTACACGGACCCA",3,47.28,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1K N107A L125K L162H",4
"lib1","SARS-CoV-2","GATCTACACTTAGGCA",2,84.74,10.79,0.03,0.07,2.96,1.03,0,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","GATCTACATTGACTCA",4,0.55,NA,NA,NA,NA,NA,NA,"stop","S19* V103T Y165W",3
"lib1","SARS-CoV-2","GATCTACCTTGGGTGA",1,13.66,10.81,0.05,0.1,2.85,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATCTACGACAAAGTA",5,38.14,6.22,-4.55,0.94,1.5,1.26,0.05,">1 nonsynonymous","C6L D90I L188R",3
"lib1","SARS-CoV-2","GATCTACGCTAGTGTT",3,22.62,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C6D K87A P133L",3
"lib1","SARS-CoV-2","GATCTACGGTAAACGG",2,23.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V52S A89P L122V Y143S T193A",5
"lib1","SARS-CoV-2","GATCTACTCCAAATAA",2,15.33,10.33,-0.44,0.12,2.19,1,0.01,">1 nonsynonymous","T3S T63I A81M",3
"lib1","SARS-CoV-2","GATCTAGATACAAGTA",3,21.82,10.88,0.12,0.09,2.84,1.12,0,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","GATCTAGGAAACACAA",4,52.92,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","W23G G51R L60I F70D G86S N157R",6
"lib1","SARS-CoV-2","GATCTAGTACATACTT",4,148.55,10.55,-0.22,0.04,2.94,1,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","GATCTATAGACCATAC",4,61.35,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6D N13H K94D W106N S139R",5
"lib1","SARS-CoV-2","GATCTATGACAGGGAG",3,10.93,10.8,0.04,0.08,2.92,1.06,0,">1 nonsynonymous","L5K N120K",2
"lib1","SARS-CoV-2","GATCTATGTATATGAC",3,0.94,NA,NA,NA,NA,NA,NA,"stop","C6W F47L A89*",3
"lib1","SARS-CoV-2","GATCTCAATGCTCGCT",2,20.54,6.46,-4.31,0.83,1.5,1.18,0.07,">1 nonsynonymous","I88K L125R",2
"lib1","SARS-CoV-2","GATCTCACCTAACAAA",4,73.18,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","D112S S129G F156T A192E",4
"lib1","SARS-CoV-2","GATCTCACTAACCCGA",6,0.2,NA,NA,NA,NA,NA,NA,"stop","Y50I L122H R136A Y178*",4
"lib1","SARS-CoV-2","GATCTCACTCTCAAAG",5,35.92,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S45L C61L K87G L125T L183G",5
"lib1","SARS-CoV-2","GATCTCAGATACCGAT",3,32.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R124I I138S F167Q",3
"lib1","SARS-CoV-2","GATCTCATTAATCCCT",5,75.55,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9V S69V I104V E135C",4
"lib1","SARS-CoV-2","GATCTCCAAATTTAAC",1,6.25,10.12,-0.65,0.23,2.21,1,0.01,">1 nonsynonymous","N1Q L95V E135R",3
"lib1","SARS-CoV-2","GATCTCGAGGCTCGCC",3,27.21,10.65,-0.11,0.08,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATCTCGATTGCCTAG",3,14.26,6.15,-4.61,0.77,1.5,1.09,0.02,">1 nonsynonymous","N4L F8T R16T W106S",4
"lib1","SARS-CoV-2","GATCTCGCACGTAGAA",8,171.04,9.89,-0.87,0.07,2.6,1.05,0,">1 nonsynonymous","E10Q C31L S43I",3
"lib1","SARS-CoV-2","GATCTCGGATTTAACC",4,123.9,9.15,-1.61,0.06,2.86,1.1,0,">1 nonsynonymous","V37W K114L V153I N157S",4
"lib1","SARS-CoV-2","GATCTCGGGTAGCAGA",4,45.03,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6D R27L E141L P161E",4
"lib1","SARS-CoV-2","GATCTCGGGTGGGGGA",2,36.49,10.69,-0.07,0.05,2.93,1.03,0,"1 nonsynonymous","R27P",1
"lib1","SARS-CoV-2","GATCTCGTGGTATCTA",1,86.07,10.23,-0.53,0.07,2.85,1,0,">1 nonsynonymous","F44V R73K",2
"lib1","SARS-CoV-2","GATCTCTAATGTAAAT",1,35.09,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F12W L162G V180F",3
"lib1","SARS-CoV-2","GATCTCTACAAGGCCA",4,46.97,9.94,-0.83,0.1,2.64,1,0,">1 nonsynonymous","I2S T15L S43L N64C T100S",5
"lib1","SARS-CoV-2","GATCTCTACCAACTGA",4,73.29,10.47,-0.3,0.07,2.81,1.07,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","GATCTCTTTTGAAACT",7,66.32,8.64,-2.13,0.13,1.94,1.13,0.01,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","GATCTGAACAAAAGAA",10,94.69,8.41,-2.36,0.09,2.24,1.09,0,">1 nonsynonymous","G83K N107Q K114T P169G",4
"lib1","SARS-CoV-2","GATCTGAACAAATCGT",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D T170I",2
"lib1","SARS-CoV-2","GATCTGAAGCTCCACA",3,37.34,6.56,-4.21,0.55,1.5,1.17,0.05,">1 nonsynonymous","N58T S108I",2
"lib1","SARS-CoV-2","GATCTGAATCTAAGGT",4,26.22,6.13,-4.64,1.04,1.5,1.18,0.03,">1 nonsynonymous","D59F D97T W106L",3
"lib1","SARS-CoV-2","GATCTGAATGATCGAA",5,44.98,10.46,-0.31,0.05,2.96,1.05,0,">1 nonsynonymous","A33T T63S",2
"lib1","SARS-CoV-2","GATCTGACGGACCACA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","E10D G101T Y121* Y143I F160T G166A Q176R",7
"lib1","SARS-CoV-2","GATCTGACGTACTATA",5,91.47,10.31,-0.46,0.04,2.85,1.02,0,">1 nonsynonymous","T85R S164P F185G",3
"lib1","SARS-CoV-2","GATCTGATGCTTGAAC",2,71.68,9.43,-1.34,0.06,2.86,1.09,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","GATCTGATGTACTACC",4,7.61,6,-4.76,2,1.5,1.06,0.05,">1 nonsynonymous","R25I N64M I88T S200F",4
"lib1","SARS-CoV-2","GATCTGCACTTGGTAA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M A67S F160R V173Q L187S",5
"lib1","SARS-CoV-2","GATCTGCCAGACGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V F99G I142Q S147N",4
"lib1","SARS-CoV-2","GATCTGCGAGCAAAAA",3,25.99,6.86,-3.9,0.43,1.5,1.16,0.03,">1 nonsynonymous","K26Q E76W P96V",3
"lib1","SARS-CoV-2","GATCTGGAACCGAAGG",3,92.22,10.68,-0.08,0.04,2.96,1,0,">1 nonsynonymous","E10L T201M",2
"lib1","SARS-CoV-2","GATCTGGACCTCGGAG",7,47.87,9.83,-0.94,0.07,2.5,1.05,0,">1 nonsynonymous","N40L L60S I104F E141G G152H",5
"lib1","SARS-CoV-2","GATCTGGATACACGGA",7,38.37,10.01,-0.76,0.13,2.28,1.06,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GATCTGGTGATTCGTA",5,54.56,10.71,-0.06,0.04,2.89,1.01,0,">1 nonsynonymous","N1C T201D",2
"lib1","SARS-CoV-2","GATCTGTCAGGCTCAA",5,23.33,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","L95W N107R",2
"lib1","SARS-CoV-2","GATCTGTGCCGATAAA",6,69.07,6,-4.76,1.14,1.5,1.19,0.01,">1 nonsynonymous","V37I I88A G155R",3
"lib1","SARS-CoV-2","GATCTTAAGCACCATT",1,37.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D S19T N40R",3
"lib1","SARS-CoV-2","GATCTTACAAAAAAGC",1,0.23,NA,NA,NA,NA,NA,NA,"stop","L5* N40F",2
"lib1","SARS-CoV-2","GATCTTACTTGACCTA",3,1.21,NA,NA,NA,NA,NA,NA,"stop","A14* N40I T63I D68A T100K V173F",6
"lib1","SARS-CoV-2","GATCTTAGGAGAATGT",3,15.61,NA,NA,NA,NA,NA,NA,"stop","T63V A105T I138* A145G",4
"lib1","SARS-CoV-2","GATCTTAGTGAATTTA",5,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y175S",2
"lib1","SARS-CoV-2","GATCTTATGACAATGT",1,109.76,10.8,0.04,0.05,2.88,1.09,0,">1 nonsynonymous","V37R L122M P149S",3
"lib1","SARS-CoV-2","GATCTTATTGATACAC",4,53.32,8.07,-2.7,0.2,1.5,1.19,0.01,">1 nonsynonymous","G9L N107Q P149C",3
"lib1","SARS-CoV-2","GATCTTCAAACAATTA",8,117.92,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A42P G146K Y175N",3
"lib1","SARS-CoV-2","GATCTTCAAGATGACT",8,14.55,6.15,-4.61,1.24,1.5,1.28,0.07,">1 nonsynonymous","D90L I104R",2
"lib1","SARS-CoV-2","GATCTTCACCAAAGAC",3,5.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D Y21M D90S G117L",4
"lib1","SARS-CoV-2","GATCTTCAGTTGCCCC",8,65.85,9.14,-1.62,0.19,1.5,1.23,0.02,">1 nonsynonymous","A33E D90S N107P",3
"lib1","SARS-CoV-2","GATCTTCCTGAACTAG",1,32.48,10.04,-0.72,0.11,2.42,1.03,0,">1 nonsynonymous","L5P A81T K128F",3
"lib1","SARS-CoV-2","GATCTTGATATACGCG",16,104.26,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N1T N107G N120S V180Y",4
"lib1","SARS-CoV-2","GATCTTGCAAATTCGT",3,31.02,10.68,-0.08,0.11,2.85,1,0.01,">1 nonsynonymous","F44S N64I N171F",3
"lib1","SARS-CoV-2","GATCTTGCAGAAACAA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K D34P N109H C158V",4
"lib1","SARS-CoV-2","GATCTTTAAGGGATCA",4,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D T100R L183N",3
"lib1","SARS-CoV-2","GATCTTTACCTGAAAC",1,12.4,10.32,-0.45,0.07,2.94,1,0,">1 nonsynonymous","A33S P54I C61S",3
"lib1","SARS-CoV-2","GATCTTTATAAAAGTA",2,15.64,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T85V Y119L P161R G174R",4
"lib1","SARS-CoV-2","GATCTTTATATCTCCG",2,32.75,10.32,-0.44,0.09,2.64,1.14,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","GATCTTTATTTTTCAC",1,22.18,6.1,-4.67,0.54,1.5,1.1,0.01,">1 nonsynonymous","G86R G155F",2
"lib1","SARS-CoV-2","GATCTTTGTTCGAGCC",1,30.89,10.18,-0.58,0.09,2.57,1,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GATCTTTTCAAATGAT",2,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128I R179Q",2
"lib1","SARS-CoV-2","GATCTTTTTTAAACCG",1,0.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","GATCTTTTTTAAGAGA",3,46.45,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8V L38G C61F Y91C D98N F156L",6
"lib1","SARS-CoV-2","GATGAAAAAAAAGATA",4,135.33,10.76,-0.01,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGAAAAACGAGGAC",2,16.62,6.08,-4.68,0.8,1.5,1.16,0.01,">1 nonsynonymous","R16C V182Y",2
"lib1","SARS-CoV-2","GATGAAAATAAGAATA",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V K48R T55W I88L T100Y S129F",6
"lib1","SARS-CoV-2","GATGAAACATGGGTCT",16,221.01,6,-4.76,1.4,1.5,1.16,0.01,">1 nonsynonymous","A22M V77F Y91C L122T",4
"lib1","SARS-CoV-2","GATGAAACCTAGTGCA",2,1.73,NA,NA,NA,NA,NA,NA,"stop","D68W L95* R136A P149Y",4
"lib1","SARS-CoV-2","GATGAAACTAGTCTAG",4,58.3,10.6,-0.16,0.05,2.95,1,0,">1 nonsynonymous","L5S N120M K132F",3
"lib1","SARS-CoV-2","GATGAAACTCGAACAC",7,51.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P82S D90P G117C",3
"lib1","SARS-CoV-2","GATGAAAGCAGTTAAG",7,84.82,8.41,-2.36,0.16,2.95,1.05,0.01,">1 nonsynonymous","S45Q G155D Q168L",3
"lib1","SARS-CoV-2","GATGAAAGTTTCAAAC",4,17.93,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","P82W C150T",2
"lib1","SARS-CoV-2","GATGAAATCGTCGATT",11,245.95,10.69,-0.08,0.04,2.93,1.04,0,"1 nonsynonymous","G9W",1
"lib1","SARS-CoV-2","GATGAAATTAACGAGC",1,42.75,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N118S S147C R179K",3
"lib1","SARS-CoV-2","GATGAAATTCTCCCTT",11,3038.84,6,-4.76,1.6,1.5,1.15,0.01,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","GATGAAATTGGATTAA",9,153.4,10.74,-0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGAACAATTTTAAT",4,78.27,10.74,-0.03,0.08,2.89,1.11,0,"1 nonsynonymous","N130P",1
"lib1","SARS-CoV-2","GATGAACAGAATATAA",1,66.71,8.61,-2.15,0.08,2.57,1.09,0,">1 nonsynonymous","T15Y N110L Y119S",3
"lib1","SARS-CoV-2","GATGAACAGATCAAAG",5,74.54,10.52,-0.25,0.05,2.9,1.01,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","GATGAACCAATGAATC",2,12.26,9.75,-1.01,0.24,1.82,1.12,0.03,">1 nonsynonymous","V37W A89R E141S",3
"lib1","SARS-CoV-2","GATGAACCATTTACAC",3,82.94,9.5,-1.26,0.1,2.8,1.07,0,">1 nonsynonymous","S129T Q176A",2
"lib1","SARS-CoV-2","GATGAACCGTCTCATG",15,176.56,9.78,-0.98,0.07,2.48,1.05,0,">1 nonsynonymous","G9P C31S S147Y",3
"lib1","SARS-CoV-2","GATGAACGATAAAACA",11,23.91,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","N13T Y66G D90S",3
"lib1","SARS-CoV-2","GATGAACGCCAAATGG",2,0.89,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GATGAAGAAGAAAAAT",8,140.12,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L5G D98M S139F Y175Q T201P",5
"lib1","SARS-CoV-2","GATGAAGATAGGATGC",14,96.49,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48N A81E S108W Y175M",4
"lib1","SARS-CoV-2","GATGAAGATTCGACGC",5,0,NA,NA,NA,NA,NA,NA,"stop","Q84L I88Y P96* A105C C150G",5
"lib1","SARS-CoV-2","GATGAAGCGAGTTAAT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","A67H G101* N107R Y119D",4
"lib1","SARS-CoV-2","GATGAAGCTCTGCCGA",15,268.29,10.45,-0.31,0.03,2.9,1.02,0,">1 nonsynonymous","A81M K198R",2
"lib1","SARS-CoV-2","GATGAAGTCAACAGAG",4,26.1,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","F70L I138L Y175M",3
"lib1","SARS-CoV-2","GATGAATAACGTGCCA",4,2.76,NA,NA,NA,NA,NA,NA,"stop","V71* I88R P149G",3
"lib1","SARS-CoV-2","GATGAATACGCCAATT",5,0.58,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","GATGAATATAAATTAC",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y D137Y T201S",3
"lib1","SARS-CoV-2","GATGAATATGACCTCG",4,31.78,9.95,-0.81,0.12,2.19,1,0.01,">1 nonsynonymous","N24V A105Y",2
"lib1","SARS-CoV-2","GATGAATATGCGAAAT",4,61.32,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6N I80V Y119H Y143D G174A",5
"lib1","SARS-CoV-2","GATGAATCCAAGTAAG",4,8.59,NA,NA,NA,NA,NA,NA,"stop","Y50E T63I D98* E154K",4
"lib1","SARS-CoV-2","GATGAATCTACGGCCT",2,3.13,NA,NA,NA,NA,NA,NA,"stop","S36* N110R",2
"lib1","SARS-CoV-2","GATGAATCTGAAGTTG",1,12.35,6,-4.76,2,1.98,1.15,0.04,">1 nonsynonymous","V11T T100S S129R E141L C150L",5
"lib1","SARS-CoV-2","GATGAATTAGCAACAA",7,37.03,6,-4.76,0.62,1.5,1.12,0,">1 nonsynonymous","K87F D97V Q144R F167N",4
"lib1","SARS-CoV-2","GATGACAAAAAGAGGA",1,16.43,10.22,-0.54,0.14,2.92,1.01,0.01,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","GATGACAAACATGTAA",6,134.68,10.8,0.04,0.06,2.95,1.01,0,">1 nonsynonymous","R78P S129D",2
"lib1","SARS-CoV-2","GATGACAAACGCCTAA",3,41.83,6.06,-4.7,1.02,1.5,1.24,0.02,">1 nonsynonymous","N4D Y165R Y175H S184I",4
"lib1","SARS-CoV-2","GATGACAACCCACCTA",1,70.58,10.2,-0.56,0.05,2.82,1,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","GATGACACCTATAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T T201N",2
"lib1","SARS-CoV-2","GATGACATAATCACTA",2,12.38,10.73,-0.04,0.11,2.87,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATGACATCCGATGAA",8,96.67,10.1,-0.67,0.06,2.64,1,0,">1 nonsynonymous","I28M S36K D90Y D97S",4
"lib1","SARS-CoV-2","GATGACATGTCAGAAC",2,45.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3G C31P F44L G83D Y93L N107H Y119N G174S",8
"lib1","SARS-CoV-2","GATGACCAATCAAATC",10,50.12,7.72,-3.05,0.16,1.5,1.1,0.01,">1 nonsynonymous","D90Y D97T N171G",3
"lib1","SARS-CoV-2","GATGACCCAGATTATA",4,73.47,7.08,-3.69,0.34,1.5,1.16,0.03,">1 nonsynonymous","F12R F47Y I88F Y165F",4
"lib1","SARS-CoV-2","GATGACCCTAAATAGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S P96G S113W",3
"lib1","SARS-CoV-2","GATGACCCTTACACTA",4,44.35,10.59,-0.17,0.05,2.94,1,0,">1 nonsynonymous","R16I N64I A190S",3
"lib1","SARS-CoV-2","GATGACCTGGTAGGAA",6,17.54,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4K P96Q C150L",3
"lib1","SARS-CoV-2","GATGACGAACCCCACG",2,1.74,NA,NA,NA,NA,NA,NA,"stop","K87* D98K Y178N",3
"lib1","SARS-CoV-2","GATGACGCACGTTATT",2,69.19,10.14,-0.62,0.08,2.63,1.06,0,">1 nonsynonymous","T85K P133N",2
"lib1","SARS-CoV-2","GATGACGCATGTCTCC",4,22.57,6.41,-4.36,0.47,1.5,1.12,0.02,">1 nonsynonymous","G83F D98M C158R",3
"lib1","SARS-CoV-2","GATGACGTGGTATTAT",2,14.16,6.32,-4.45,0.63,3,1.08,0,"1 nonsynonymous","C150M",1
"lib1","SARS-CoV-2","GATGACTTAATCCCCA",1,44.29,10.78,0.01,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGACTTATTAAGAA",3,98.37,10.73,-0.04,0.05,2.96,1,0,">1 nonsynonymous","S41Y P149M",2
"lib1","SARS-CoV-2","GATGACTTGGTACATG",5,44.08,9.58,-1.19,0.1,2.43,1.09,0,">1 nonsynonymous","S43M I138K G155V",3
"lib1","SARS-CoV-2","GATGAGACCACTAATG",4,82.44,10.78,0.02,0.05,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGAGACGTGGGTCT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","W23S S45* N58V E141G",4
"lib1","SARS-CoV-2","GATGAGAGAGTTAAGC",2,0,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib1","SARS-CoV-2","GATGAGAGCAGTTAGC",5,78.46,6.16,-4.6,0.78,1.5,1.22,0.02,">1 nonsynonymous","N4L D137L",2
"lib1","SARS-CoV-2","GATGAGAGCTAAATAG",2,13.43,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","N40L D90S Y165C",3
"lib1","SARS-CoV-2","GATGAGATGAATCACA",3,4.14,NA,NA,NA,NA,NA,NA,"stop","N4I S45L G83*",3
"lib1","SARS-CoV-2","GATGAGATGCGTTTCA",1,81.27,10.56,-0.2,0.04,2.96,1,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","GATGAGCAACAATTGG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","C61* D90S N107S N151T",4
"lib1","SARS-CoV-2","GATGAGCGTCACTTTC",1,1.55,NA,NA,NA,NA,NA,NA,"stop","I28R S41L D68E T85I R136T P149*",6
"lib1","SARS-CoV-2","GATGAGCTTAACCCGA",3,29.42,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T63N D68M I80K",3
"lib1","SARS-CoV-2","GATGAGGCAAGTTAGC",15,2.77,NA,NA,NA,NA,NA,NA,"stop","F62D Q144*",2
"lib1","SARS-CoV-2","GATGAGGCACAATACT",2,45.94,9.73,-1.04,0.13,2.12,1.07,0.01,">1 nonsynonymous","N40T T55C G83R P149W",4
"lib1","SARS-CoV-2","GATGAGGCTCACTCTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I Y143P",2
"lib1","SARS-CoV-2","GATGAGGTGCTACTTT",4,153.51,8.22,-2.54,0.18,1.5,1.12,0.01,">1 nonsynonymous","F44G Q176T",2
"lib1","SARS-CoV-2","GATGAGTACTCCAAAC",3,108.79,10.65,-0.11,0.05,2.94,1.01,0,">1 nonsynonymous","D59M L122V",2
"lib1","SARS-CoV-2","GATGAGTAGCTTTGAA",4,0,NA,NA,NA,NA,NA,NA,"stop","N1S G83L D97Y S139F Y143* F185I",6
"lib1","SARS-CoV-2","GATGAGTGAAGAATGA",7,0.3,NA,NA,NA,NA,NA,NA,"stop","D90G I104*",2
"lib1","SARS-CoV-2","GATGAGTGACGTCGTC",7,95.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36M A81G N107G S139H C158L",5
"lib1","SARS-CoV-2","GATGAGTTTAGGACAT",12,128.16,8.4,-2.36,0.22,1.5,1.14,0.02,">1 nonsynonymous","L38S S139I P197S",3
"lib1","SARS-CoV-2","GATGATAAACCCTAGG",2,44.61,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37G D68K D90M",3
"lib1","SARS-CoV-2","GATGATAACTCAACAA",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42W Y91M",2
"lib1","SARS-CoV-2","GATGATAATTCACATA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","V32H T100* Y159R Y175V",4
"lib1","SARS-CoV-2","GATGATACCTATTACA",4,53.29,10.63,-0.13,0.05,2.89,1,0,">1 nonsynonymous","P7Y E154R",2
"lib1","SARS-CoV-2","GATGATACGTTTAGTA",1,54.69,10.76,0,0.08,2.85,1.12,0,"1 nonsynonymous","A192K",1
"lib1","SARS-CoV-2","GATGATAGCCCCGGTC",3,40.63,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N107V Y178P",2
"lib1","SARS-CoV-2","GATGATAGCCCTAGTA",4,131.01,6,-4.76,2,3,1.16,0,">1 nonsynonymous","P82M S113Q V194R K198R",4
"lib1","SARS-CoV-2","GATGATAGTGTTAACA",6,63.34,6.48,-4.28,0.43,1.5,1.22,0.02,">1 nonsynonymous","G9W A22M F126R Q144S G152C",5
"lib1","SARS-CoV-2","GATGATATAACTTCAA",2,44.96,10.34,-0.43,0.04,2.84,1,0,">1 nonsynonymous","A67T L122E",2
"lib1","SARS-CoV-2","GATGATATAAGCTCCG",3,93.58,10.6,-0.16,0.04,2.94,1.02,0,">1 nonsynonymous","N64Q K94H",2
"lib1","SARS-CoV-2","GATGATCATAGTAGTG",4,30.65,8.79,-1.98,0.16,1.59,1.07,0.01,">1 nonsynonymous","Y121A R136L",2
"lib1","SARS-CoV-2","GATGATCATCGATACT",5,59.12,10.66,-0.11,0.06,2.91,1.06,0,">1 nonsynonymous","T85N N120M",2
"lib1","SARS-CoV-2","GATGATCCAAGATATC",1,11.4,9.56,-1.2,0.19,2.63,1.12,0.01,">1 nonsynonymous","N58A Y119V A145S",3
"lib1","SARS-CoV-2","GATGATCCCGAGCCTG",3,0,NA,NA,NA,NA,NA,NA,"stop","L60* K87H R136M",3
"lib1","SARS-CoV-2","GATGATCTAGGTCATA",3,56.76,9.39,-1.37,0.1,1.73,1.1,0,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","GATGATGAAATTCGAT",2,53.57,10.69,-0.08,0.06,2.83,1.03,0,">1 nonsynonymous","D97L F160D",2
"lib1","SARS-CoV-2","GATGATGCTCATGACA",5,45.31,7.31,-3.45,0.34,1.5,1.22,0.04,">1 nonsynonymous","K56D W106G G116V",3
"lib1","SARS-CoV-2","GATGATGGCAACTCCC",11,4.66,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GATGATGTCTATACAT",15,60.93,6.65,-4.12,0.43,1.5,1.16,0.02,">1 nonsynonymous","N1R S45P D90C F99N K132T",5
"lib1","SARS-CoV-2","GATGATGTTGTTTAAG",5,52.43,9.65,-1.12,0.09,2.07,1.09,0,">1 nonsynonymous","V77L T85L P96S",3
"lib1","SARS-CoV-2","GATGATTAAAACAAAT",2,28.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86T T100Y N157L",3
"lib1","SARS-CoV-2","GATGATTAAGTCTTCT",1,6.06,6,-4.76,1.43,1.5,1.19,0.02,">1 nonsynonymous","L60W P96R S129I Y159P",4
"lib1","SARS-CoV-2","GATGATTAGACAGCTA",3,16.09,9.23,-1.53,0.14,2.05,1.13,0.01,">1 nonsynonymous","Y35P D59T Q79K",3
"lib1","SARS-CoV-2","GATGATTAGAGCATGA",9,135.58,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K87E V115K G172T",3
"lib1","SARS-CoV-2","GATGATTAGTCCGAAA",4,9.24,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L57K D98C V103R V181L",4
"lib1","SARS-CoV-2","GATGATTGAACGCGTT",2,39.08,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G9L R73A G86Y N118H L125G S164E",6
"lib1","SARS-CoV-2","GATGATTTACCTAATA",2,23.96,10.23,-0.53,0.1,2.79,1.02,0.01,">1 nonsynonymous","Y66H Q144P",2
"lib1","SARS-CoV-2","GATGCAAAAATCAAAC",1,19.48,8.13,-2.63,0.25,1.68,1.1,0.04,">1 nonsynonymous","F44W R78H W106C K114F G174L",5
"lib1","SARS-CoV-2","GATGCAAAGATAACCC",9,59.99,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5S D68M N110Y N120R S164L",5
"lib1","SARS-CoV-2","GATGCAAATTCAAATA",4,63.42,6.69,-4.07,0.36,1.5,1.22,0.02,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","GATGCAACAATCACAT",5,40.7,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6Y D34L D68M K94T",4
"lib1","SARS-CoV-2","GATGCAACCGTTTCCT",3,42.65,8.91,-1.85,0.16,1.55,1.15,0.01,">1 nonsynonymous","G9C I28T",2
"lib1","SARS-CoV-2","GATGCAAGAGGCTGAG",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V G51M Y66R T100N F156T",5
"lib1","SARS-CoV-2","GATGCAATAATAAGCA",1,0.92,NA,NA,NA,NA,NA,NA,"stop","F17T V103* K128Q Q144Y",4
"lib1","SARS-CoV-2","GATGCAATCCATAAAA",6,42.36,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y35N D90G L95A G174D",4
"lib1","SARS-CoV-2","GATGCAATCTAGCGTA",2,81.59,9.96,-0.81,0.12,1.89,1.1,0,">1 nonsynonymous","Y35M N58S D68Y",3
"lib1","SARS-CoV-2","GATGCAATTAGGCTGC",5,22.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N107R Y159G K198G",3
"lib1","SARS-CoV-2","GATGCACAAATGCAAC",11,212.03,10.76,0,0.06,2.91,1.03,0,">1 nonsynonymous","L5A S29T",2
"lib1","SARS-CoV-2","GATGCACAAGTAAATA",8,121.82,8.78,-1.98,0.09,2.48,1.14,0,">1 nonsynonymous","E10R G117R",2
"lib1","SARS-CoV-2","GATGCACCCGGTGCTT",1,9.08,10.73,-0.04,0.1,2.83,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGCACGAAGTCAAT",7,133.26,6.82,-3.94,0.25,1.5,1.16,0.01,">1 nonsynonymous","G9A T100Y N109I Y119A Y165V",5
"lib1","SARS-CoV-2","GATGCACGCACCAAGC",5,8.58,9.98,-0.78,0.17,2.18,1.03,0.01,">1 nonsynonymous","A42I K56Q P96H T140N",4
"lib1","SARS-CoV-2","GATGCACGCGGATAAG",4,5.36,7.57,-3.2,0.34,3,1.01,0,">1 nonsynonymous","T15G D59T G86M V103T N107I G155A",6
"lib1","SARS-CoV-2","GATGCACTAAAATAAT",6,60.85,10.85,0.08,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGCACTATGTGAAG",8,71.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3L A89N Y121S K128Y P161H",5
"lib1","SARS-CoV-2","GATGCACTCTGAGAAG",10,2027.89,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","N30I V71E S147K",3
"lib1","SARS-CoV-2","GATGCAGAATAACGAT",1,29.2,10.82,0.06,0.07,2.87,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GATGCAGAGTCTTCAT",4,46.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A14S I80K Y119W",3
"lib1","SARS-CoV-2","GATGCAGATGTTGGAC",4,23.5,10.3,-0.47,0.09,2.63,1,0,">1 nonsynonymous","F47L K56N D97G",3
"lib1","SARS-CoV-2","GATGCAGCGTCACTAC",4,175.43,10.71,-0.06,0.03,2.92,1.01,0,"1 nonsynonymous","S29I",1
"lib1","SARS-CoV-2","GATGCAGGATGACCAA",12,194.32,10.76,0,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGCAGTCAGGAACC",2,7.94,10.41,-0.36,0.18,2.96,1,0.01,">1 nonsynonymous","V52L E135T",2
"lib1","SARS-CoV-2","GATGCAGTCGCCATAA",6,287.13,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","K56V V115Y G152T Q176G",4
"lib1","SARS-CoV-2","GATGCATAGATTCGAT",2,22.68,9.94,-0.82,0.1,2.7,1.03,0.01,">1 nonsynonymous","A33L I142A",2
"lib1","SARS-CoV-2","GATGCATATAAAATAA",3,137.62,8.94,-1.82,0.07,2.87,1.08,0,">1 nonsynonymous","L125R K132Y",2
"lib1","SARS-CoV-2","GATGCATATATATAAG",5,55.4,10.83,0.07,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGCATATCAAGGGT",5,52.8,6,-4.76,1.3,1.5,1.23,0.01,">1 nonsynonymous","V11N D90V G146K E154T",4
"lib1","SARS-CoV-2","GATGCATCTACAATTC",7,27.64,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V11I F17S D68N D75W D98S",5
"lib1","SARS-CoV-2","GATGCATGTTTATACC",3,110.48,10.65,-0.11,0.05,2.89,1.05,0,">1 nonsynonymous","N4K L122I P149E",3
"lib1","SARS-CoV-2","GATGCCACGACCCCCA",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H D98Y N157S",3
"lib1","SARS-CoV-2","GATGCCACTTACATAG",1,12.19,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F44V V71S G86F L183F",4
"lib1","SARS-CoV-2","GATGCCCCAGGTACTG",5,55.9,6.06,-4.71,0.73,1.5,1.26,0.01,">1 nonsynonymous","P96W N107T",2
"lib1","SARS-CoV-2","GATGCCCCATTTGCCG",5,78.69,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","A67G P82L R179H",3
"lib1","SARS-CoV-2","GATGCCCTATCACGTT",1,24.39,10.48,-0.28,0.07,2.9,1,0,">1 nonsynonymous","N4F Q144S V173L",3
"lib1","SARS-CoV-2","GATGCCGACACCCGAC",1,8.81,10.01,-0.76,0.15,2.4,1.04,0.01,">1 nonsynonymous","T3E G9R D90F",3
"lib1","SARS-CoV-2","GATGCCGGAGCTCGAG",2,20.26,10.28,-0.48,0.13,2.82,1.05,0.02,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","GATGCCGTTAAAAGGA",1,7.04,8.93,-1.83,0.32,1.55,1.35,0.08,"1 nonsynonymous","W106E",1
"lib1","SARS-CoV-2","GATGCCTATTACATAA",1,36.54,10.69,-0.07,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGCCTCATTCCCCA",3,43.14,6,-4.76,0.68,1.75,1.12,0,">1 nonsynonymous","A14Y W23V G51W",3
"lib1","SARS-CoV-2","GATGCCTGACATCTCA",5,37.52,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G51V Y121S R136T P197M",4
"lib1","SARS-CoV-2","GATGCCTGGAGAAACG",7,106,9.41,-1.35,0.11,1.89,1.09,0,">1 nonsynonymous","F8H Y121F",2
"lib1","SARS-CoV-2","GATGCCTGGTGCAAAA",6,203.87,8.64,-2.13,0.08,2.74,1.08,0,"1 nonsynonymous","S113R",1
"lib1","SARS-CoV-2","GATGCGAACAACGCTA",12,5.89,NA,NA,NA,NA,NA,NA,"stop","P82Y N120* T201S",3
"lib1","SARS-CoV-2","GATGCGAAGTCTTTTA",6,43.2,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R124K L131F",2
"lib1","SARS-CoV-2","GATGCGACAAATATCA",3,32.86,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N40H D97V L125K N157F",4
"lib1","SARS-CoV-2","GATGCGACAGGGATTA",6,64.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37F G83C Y143K Q168L",4
"lib1","SARS-CoV-2","GATGCGACATTTCGAC",3,105.74,10.66,-0.1,0.04,2.92,1.06,0,">1 nonsynonymous","I142V V153M",2
"lib1","SARS-CoV-2","GATGCGAGAAATAAAT",2,63.09,10.74,-0.03,0.07,2.89,1.05,0,">1 nonsynonymous","N130R N171Y Y178L T201L",4
"lib1","SARS-CoV-2","GATGCGAGGCCTGGAT",5,2.09,NA,NA,NA,NA,NA,NA,"stop","G86W I104* F185M",3
"lib1","SARS-CoV-2","GATGCGCAATTAAGTC",1,84.62,8.23,-2.54,0.13,2,1.1,0.01,">1 nonsynonymous","R73D L122V",2
"lib1","SARS-CoV-2","GATGCGCGAGCCATAG",5,5.83,7.09,-3.67,0.85,1.5,1.04,0.07,">1 nonsynonymous","A14S A22I L60R I138C G172M",5
"lib1","SARS-CoV-2","GATGCGCTAAGTATTA",2,50.21,8.7,-2.06,0.08,2.89,1.05,0,">1 nonsynonymous","S36Q S113V",2
"lib1","SARS-CoV-2","GATGCGGAAACAATTA",2,135.69,8.35,-2.41,0.16,2.84,1.05,0.01,">1 nonsynonymous","K114T N157K P197H",3
"lib1","SARS-CoV-2","GATGCGGAACCACACA",4,49.42,9.91,-0.86,0.05,2.92,1.03,0,"1 nonsynonymous","R73S",1
"lib1","SARS-CoV-2","GATGCGGACCGACCTT",6,67.03,6,-4.76,0.87,2.27,1.11,0,">1 nonsynonymous","N1K F99L G172E",3
"lib1","SARS-CoV-2","GATGCGGACTTATGAT",2,5.37,6.19,-4.58,2,3,1.02,0,">1 nonsynonymous","N1K F12E G74A L111R",4
"lib1","SARS-CoV-2","GATGCGTAAATTCCTT",4,80.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4W V37S A67N L187T",4
"lib1","SARS-CoV-2","GATGCGTGAAAGATAA",4,19.28,6.5,-4.26,0.96,1.5,1.07,0.08,">1 nonsynonymous","F62S A89C N107L",3
"lib1","SARS-CoV-2","GATGCGTTAATTAAGC",2,22.17,9.28,-1.48,0.17,1.83,1.17,0.01,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","GATGCTAACGCAATCT",2,78.83,10.78,0.01,0.1,2.83,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GATGCTAATACTAACT",1,68.57,8.67,-2.09,0.07,2.75,1.07,0,">1 nonsynonymous","C61L G117A S139G",3
"lib1","SARS-CoV-2","GATGCTACCGAATTGT",2,36.08,9.15,-1.61,0.08,2.9,1.08,0,">1 nonsynonymous","D97N Q168L S200T",3
"lib1","SARS-CoV-2","GATGCTACTAGTGACA",11,39.73,9.66,-1.1,0.28,1.5,1.05,0.03,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","GATGCTACTCATGTGA",4,46.51,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S45V A145T Y159S Q168I",4
"lib1","SARS-CoV-2","GATGCTATAAAAAAGA",2,27.42,6.11,-4.66,1.02,1.5,1.26,0.04,">1 nonsynonymous","W23K S41P D98V A190H",4
"lib1","SARS-CoV-2","GATGCTATCCTTGGTT",2,17.62,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P54N C61S F99T K114R",4
"lib1","SARS-CoV-2","GATGCTATTTGCTCCA",7,123.79,8.69,-2.07,0.08,2.64,1.1,0,">1 nonsynonymous","A14E N109S",2
"lib1","SARS-CoV-2","GATGCTCAAGCGAACT",5,155.59,10.65,-0.11,0.04,2.91,1.04,0,">1 nonsynonymous","T63S D90M",2
"lib1","SARS-CoV-2","GATGCTCAAGTGAAGC",5,65.94,10.04,-0.72,0.06,2.81,1.01,0,">1 nonsynonymous","S19D N151L T201R",3
"lib1","SARS-CoV-2","GATGCTCCCAATAAAC",1,35.52,10.4,-0.36,0.09,2.85,1,0,">1 nonsynonymous","N4M A14R V37A K198C",4
"lib1","SARS-CoV-2","GATGCTCCCCCTATAA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","P7* R27L L38A G155S",4
"lib1","SARS-CoV-2","GATGCTCTTCACTGCA",5,15.08,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T3M W23E D98A I104K",4
"lib1","SARS-CoV-2","GATGCTTAAGCCACGG",1,49.75,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V65R K94E G155K G166E",4
"lib1","SARS-CoV-2","GATGGAAAACATGATG",4,32.86,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","S43D G51T Q84D F99N G174S",5
"lib1","SARS-CoV-2","GATGGAAAATTCATTG",4,2.14,NA,NA,NA,NA,NA,NA,"stop","V103L P133*",2
"lib1","SARS-CoV-2","GATGGAAAGACCGAGC",1,7.72,9.03,-1.73,0.22,1.6,1.05,0.02,">1 nonsynonymous","T63K L183Y",2
"lib1","SARS-CoV-2","GATGGAACACTGGCCA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","I28K G83N N151*",3
"lib1","SARS-CoV-2","GATGGAACGTGCACTA",2,17.47,10.67,-0.1,0.08,2.93,1.07,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","GATGGAAGCGTAAAAA",8,87.99,9.63,-1.13,0.08,2.82,1.11,0,">1 nonsynonymous","G152N T170R",2
"lib1","SARS-CoV-2","GATGGAATAACCTATC",1,4.35,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GATGGAATAAGTTAGG",6,33.11,10.34,-0.43,0.06,2.94,1,0,">1 nonsynonymous","E141H G155R",2
"lib1","SARS-CoV-2","GATGGACAAGACCAAG",3,30.07,6.11,-4.66,1.02,1.5,1.25,0.03,">1 nonsynonymous","F44C E141W G155M",3
"lib1","SARS-CoV-2","GATGGACAAGTCCGTT",8,75.25,9,-1.76,0.17,1.56,1.13,0.01,">1 nonsynonymous","E10M Y91F S108N",3
"lib1","SARS-CoV-2","GATGGACACAGGCTTT",5,104.9,10.7,-0.06,0.05,2.9,1.05,0,">1 nonsynonymous","P7S Y39I",2
"lib1","SARS-CoV-2","GATGGACCATATTTCG",2,33.82,10.9,0.13,0.1,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GATGGAGCCGTACAGT",1,17.97,7.38,-3.39,0.33,1.5,1.11,0.03,">1 nonsynonymous","Y50D V153H",2
"lib1","SARS-CoV-2","GATGGAGGAATTGCAT",5,79.63,10.8,0.03,0.08,2.91,1.06,0,"1 nonsynonymous","N1R",1
"lib1","SARS-CoV-2","GATGGATTTGACTACA",4,22.01,9.98,-0.79,0.14,2.45,1.18,0.01,">1 nonsynonymous","I104S S200L",2
"lib1","SARS-CoV-2","GATGGCAAAGAAAGTG",3,14.56,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L95N A190L",2
"lib1","SARS-CoV-2","GATGGCACACTACACA",5,18.96,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17W D97C V103T Y175R",4
"lib1","SARS-CoV-2","GATGGCACACTAGTCT",1,9.21,6.17,-4.6,0.91,1.5,1.11,0.02,">1 nonsynonymous","S41F T85R L95Q D112C Y119I T170D",6
"lib1","SARS-CoV-2","GATGGCAGATTTAAAG",1,34.75,10.83,0.06,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGGCAGCAAGGCTA",3,0.88,NA,NA,NA,NA,NA,NA,"stop","A14P D112P Q168*",3
"lib1","SARS-CoV-2","GATGGCATCAAAACAT",4,4.31,NA,NA,NA,NA,NA,NA,"stop","K114I Y119*",2
"lib1","SARS-CoV-2","GATGGCATGCTACCAT",2,21.78,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","R25V P82F G116V",3
"lib1","SARS-CoV-2","GATGGCCATAGGTGCA",1,5.51,6.3,-4.46,0.98,3,1,0,">1 nonsynonymous","F62E G117P K128L V182S T201S",5
"lib1","SARS-CoV-2","GATGGCCCAAGGAGTT",9,20.51,NA,NA,NA,NA,NA,NA,"stop","F44I T100* G117F L162W F167N",5
"lib1","SARS-CoV-2","GATGGCCTAGATCATT",7,70.3,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A18L G86V R136S",3
"lib1","SARS-CoV-2","GATGGCCTCAGTGACC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib1","SARS-CoV-2","GATGGCGACTAACATC",5,0.17,NA,NA,NA,NA,NA,NA,"stop","T15I V103*",2
"lib1","SARS-CoV-2","GATGGCGTTTGAAATT",8,168.59,9.97,-0.79,0.04,2.88,1.03,0,">1 nonsynonymous","S41N F156Q",2
"lib1","SARS-CoV-2","GATGGCTATACAGGGT",3,226.91,10.76,0,0.05,2.91,1.05,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GATGGCTATGAAATGG",7,196.5,9.77,-1,0.04,2.89,1.04,0,">1 nonsynonymous","I2L K87R L111H G155D",4
"lib1","SARS-CoV-2","GATGGGAACCAAACTG",3,82.26,10.63,-0.13,0.06,2.9,1.09,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","GATGGGCCGACCCGCT",3,23.03,6,-4.76,2,3,1.16,0,"1 nonsynonymous","V180D",1
"lib1","SARS-CoV-2","GATGGGCTGATACCAA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","L122* K128L",2
"lib1","SARS-CoV-2","GATGGGCTTCCGAGAC",5,61.61,9.59,-1.18,0.1,1.81,1.12,0,">1 nonsynonymous","D34K L60R S184F",3
"lib1","SARS-CoV-2","GATGGGGCAAAGCCTT",1,56.24,10.75,-0.02,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGGGGGGAAGTTCA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","GATGGGGTATCTTAGC",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W F99I A105Q T140H F167P G174M T201C",7
"lib1","SARS-CoV-2","GATGGGTTAGATCACG",6,0.73,NA,NA,NA,NA,NA,NA,"stop","N1* L60P K128I K199Q",4
"lib1","SARS-CoV-2","GATGGGTTGAGCAATG",4,76.95,9.8,-0.96,0.06,2.84,1.1,0,">1 nonsynonymous","L125V K198T",2
"lib1","SARS-CoV-2","GATGGTAAAGCCCCCA",1,6.26,8.38,-2.38,0.31,1.91,1.11,0.03,">1 nonsynonymous","N107Q G116S T148Y",3
"lib1","SARS-CoV-2","GATGGTAAGGCAATAC",4,134.36,9.98,-0.79,0.1,2.53,1.01,0,">1 nonsynonymous","E10L Y123S P149L",3
"lib1","SARS-CoV-2","GATGGTACCGTATAAA",11,90.25,10.19,-0.57,0.05,2.18,1.02,0,">1 nonsynonymous","E76V T100I",2
"lib1","SARS-CoV-2","GATGGTAGTAGAGGAC",4,51.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G101I T140S G146S A190S",4
"lib1","SARS-CoV-2","GATGGTAGTGATGTTT",3,80.31,10.02,-0.74,0.05,2.94,1,0,">1 nonsynonymous","C61P D97Q Y121L",3
"lib1","SARS-CoV-2","GATGGTATCGAACTAC",5,123.09,6,-4.76,1.69,1.5,1.13,0.01,">1 nonsynonymous","N58V N107Y Q176H",3
"lib1","SARS-CoV-2","GATGGTCAGAAAGGCA",4,17.54,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D59Q Q84G L125Y L183R",4
"lib1","SARS-CoV-2","GATGGTCGAGATAACT",2,74.15,8.27,-2.49,0.31,1.5,1.04,0.03,">1 nonsynonymous","I28G L60R G83R S147F",4
"lib1","SARS-CoV-2","GATGGTGAATGTACTG",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T T85S E135A K198A",4
"lib1","SARS-CoV-2","GATGGTGCTACAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* T63L E76S V173R",4
"lib1","SARS-CoV-2","GATGGTGGTAAATCGA",3,29.27,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C6G Y66F Y93A T100W A105E Y123G",6
"lib1","SARS-CoV-2","GATGGTGGTCAGTAAT",1,15.2,6.07,-4.69,2,3,1.15,0.01,">1 nonsynonymous","T15S P96L A105N T201L",4
"lib1","SARS-CoV-2","GATGGTTCATCGAAAG",6,1.59,NA,NA,NA,NA,NA,NA,"stop","S45C C61L D97E Y123D R136*",5
"lib1","SARS-CoV-2","GATGGTTCGACTGTGC",1,23.92,10.81,0.05,0.08,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGGTTCGGAGCTTA",5,75.03,10.65,-0.12,0.05,2.94,1,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","GATGGTTCTAGAATGA",1,13.99,NA,NA,NA,NA,NA,NA,"stop","T3K S41N P54F L60I C102* L122T G172L",7
"lib1","SARS-CoV-2","GATGTAAAAAGAGGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","F44H N58E I80K R124D S200*",5
"lib1","SARS-CoV-2","GATGTAAACACATGGG",7,119.51,10.07,-0.69,0.07,2.79,1.03,0,"1 nonsynonymous","I28A",1
"lib1","SARS-CoV-2","GATGTAAACTTCTGGC",1,36.1,6.28,-4.48,0.6,1.5,1.27,0.02,">1 nonsynonymous","V37W D90S W106S N157S",4
"lib1","SARS-CoV-2","GATGTAAATCCCCTTA",9,7.16,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","P96A P149F Q168S V181G",4
"lib1","SARS-CoV-2","GATGTAAATGCTCTGA",7,116.96,10.79,0.03,0.07,2.98,1,0,">1 nonsynonymous","S36R T201N",2
"lib1","SARS-CoV-2","GATGTAACAGTGTTTA",1,8.84,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","N13Y F47L T63C D112N T201S",5
"lib1","SARS-CoV-2","GATGTAACTATTCTGG",10,2.97,NA,NA,NA,NA,NA,NA,"stop","R127I S139N G155* F167N G174L",5
"lib1","SARS-CoV-2","GATGTAACTCATCGCT",4,62.56,10.62,-0.14,0.04,2.85,1.07,0,">1 nonsynonymous","L5T Y39W N64F",3
"lib1","SARS-CoV-2","GATGTAATACAATTCA",5,60.77,10.76,0,0.05,2.91,1.06,0,"1 nonsynonymous","S139D",1
"lib1","SARS-CoV-2","GATGTAATACATAAAG",2,42.52,8.06,-2.71,0.32,1.5,1.16,0.03,"1 nonsynonymous","A105R",1
"lib1","SARS-CoV-2","GATGTAATCCAGATAC",1,14.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","GATGTACAAAAGCTAG",3,40.64,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A81S D90K S113I",3
"lib1","SARS-CoV-2","GATGTACAACCACTCT",1,0.7,NA,NA,NA,NA,NA,NA,"stop","A42F N92* S129G",3
"lib1","SARS-CoV-2","GATGTACAACTGCAGA",5,33.99,6,-4.76,1.25,1.5,1.13,0.02,">1 nonsynonymous","N92D N110V Y121L",3
"lib1","SARS-CoV-2","GATGTACATCTAGGGT",1,15.55,10.61,-0.15,0.21,2.65,1.08,0.01,">1 nonsynonymous","A42R E135K",2
"lib1","SARS-CoV-2","GATGTACCGCCTTTTC",2,25.31,8.53,-2.23,0.17,2.38,1.13,0.02,">1 nonsynonymous","D59L G117F",2
"lib1","SARS-CoV-2","GATGTACGGATCCTAC",1,18.37,6.97,-3.8,0.39,1.5,1.02,0.04,">1 nonsynonymous","G116V R124K P149Y N157P Y178F",5
"lib1","SARS-CoV-2","GATGTACTGACAAATT",5,180.08,8.33,-2.43,0.1,2.54,1.12,0,">1 nonsynonymous","K87S T170A P177A",3
"lib1","SARS-CoV-2","GATGTACTGTAAAGAG",1,2.67,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib1","SARS-CoV-2","GATGTAGAACTATAAC",2,29.8,8.6,-2.16,0.1,3,1.03,0,">1 nonsynonymous","D97L F126G",2
"lib1","SARS-CoV-2","GATGTAGAATTGATAT",8,96.56,8.9,-1.87,0.19,1.5,1.13,0.02,">1 nonsynonymous","S45P K48E P54T T100W",4
"lib1","SARS-CoV-2","GATGTAGGTCAAATAT",7,85.1,10.74,-0.03,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGTAGTCGAATACT",2,95.59,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A18Y F62N D68R G83V K94T S129Y C150G",7
"lib1","SARS-CoV-2","GATGTATACAAATAGA",6,45.36,9.79,-0.98,0.12,2.16,1.1,0.01,">1 nonsynonymous","C31R A89S",2
"lib1","SARS-CoV-2","GATGTATGAACCTAAA",6,89.96,6.41,-4.35,0.42,1.5,1.18,0.01,">1 nonsynonymous","A14L G86R",2
"lib1","SARS-CoV-2","GATGTATGCAAAAGGT",1,22.33,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F70L Y143S V153L",3
"lib1","SARS-CoV-2","GATGTATGCGCAACCG",1,55.93,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","F17G N107V I138V",3
"lib1","SARS-CoV-2","GATGTATGTGACGGAT",19,183.89,8.96,-1.8,0.15,1.5,1.13,0.01,">1 nonsynonymous","E10A A14C L60P",3
"lib1","SARS-CoV-2","GATGTATGTTATAAGG",7,87.26,8.69,-2.07,0.13,1.73,1.17,0.01,">1 nonsynonymous","G86C N120D",2
"lib1","SARS-CoV-2","GATGTCAAATTGTTAA",3,1552.74,9.61,-1.16,0.04,2.79,1.05,0,"1 nonsynonymous","R73P",1
"lib1","SARS-CoV-2","GATGTCAACACATATT",5,125.08,10.74,-0.03,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGTCAATTACAATG",6,39.95,8.64,-2.13,0.21,1.5,1.14,0.02,">1 nonsynonymous","Y39A D90V N151I",3
"lib1","SARS-CoV-2","GATGTCACTCCAGTAG",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V P82L Y91L D97G R124I A190I",6
"lib1","SARS-CoV-2","GATGTCACTTATCCCC",5,137.82,9.82,-0.94,0.05,2.82,1.06,0,">1 nonsynonymous","G9V P169Q",2
"lib1","SARS-CoV-2","GATGTCATATATTTAC",20,107.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1Y N24S K128E P161Y",4
"lib1","SARS-CoV-2","GATGTCCCTCCTACGC",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M Y93P",2
"lib1","SARS-CoV-2","GATGTCCTGAGACGTT",1,10.66,8.4,-2.37,0.2,1.93,1.11,0.01,"1 nonsynonymous","Y165A",1
"lib1","SARS-CoV-2","GATGTCTCAAAGGAGA",4,136.62,10.44,-0.33,0.05,2.92,1.01,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","GATGTCTCACGCCGTA",3,20.37,10.55,-0.22,0.07,2.98,1,0,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","GATGTGAACAATAAAA",1,15.79,9.56,-1.21,0.19,2.35,1.16,0.01,">1 nonsynonymous","Y50I K87A T201A",3
"lib1","SARS-CoV-2","GATGTGAACCTCTTAA",2,10.94,10.92,0.16,0.17,2.94,1,0.01,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","GATGTGAACTACTTAG",2,0.55,NA,NA,NA,NA,NA,NA,"stop","A42V N107* G117M T170I",4
"lib1","SARS-CoV-2","GATGTGACCCCAGCGT",2,47.05,10.02,-0.74,0.07,2.82,1,0,">1 nonsynonymous","I2M Y123N",2
"lib1","SARS-CoV-2","GATGTGACCTCTAGGA",4,12.21,8.83,-1.94,0.19,1.5,1.05,0.03,">1 nonsynonymous","P96R P169L",2
"lib1","SARS-CoV-2","GATGTGAGAAAACAAT",4,32.02,6,-4.76,1.95,1.5,1.19,0.02,">1 nonsynonymous","L5E L38W V52T D112L V173K",5
"lib1","SARS-CoV-2","GATGTGAGATAAGCCG",4,84.49,10.84,0.08,0.08,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGTGAGGAAGCTAA",2,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F I88V G116R K132T Y165L V173T",6
"lib1","SARS-CoV-2","GATGTGATAACAAGTA",5,47.75,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92T V181E",2
"lib1","SARS-CoV-2","GATGTGATATAGCCCA",3,55.8,10.32,-0.45,0.03,2.89,1.03,0,">1 nonsynonymous","T46S L95M",2
"lib1","SARS-CoV-2","GATGTGATCACGAACC",2,21.63,7.19,-3.58,0.35,1.5,1.02,0.04,">1 nonsynonymous","G83Y F99W R124N Y175L",4
"lib1","SARS-CoV-2","GATGTGATTAAGCTTG",2,16.11,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","D90Y R124K G152L V182M",4
"lib1","SARS-CoV-2","GATGTGCACTATTTGT",6,100.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S R78M Y93C",3
"lib1","SARS-CoV-2","GATGTGCCATTTTTGC",1,23.68,10.55,-0.22,0.08,2.94,1.03,0,">1 nonsynonymous","L60S S129A",2
"lib1","SARS-CoV-2","GATGTGCCCATAATCG",2,7.38,7.16,-3.61,0.26,3,1.08,0,">1 nonsynonymous","L95E D98S Q168E",3
"lib1","SARS-CoV-2","GATGTGCGACACTTAA",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V G51N L57S G83W F126K S184Y",6
"lib1","SARS-CoV-2","GATGTGGAACGGTAAA",9,65.19,8.68,-2.09,0.17,1.81,1.16,0.01,">1 nonsynonymous","P54T W106L F156L",3
"lib1","SARS-CoV-2","GATGTGGTCTACCAAA",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y165L S184G",2
"lib1","SARS-CoV-2","GATGTGTATCAAGTAC",8,61.43,9.59,-1.18,0.11,1.89,1.11,0,">1 nonsynonymous","I2T P96V",2
"lib1","SARS-CoV-2","GATGTGTCCAAGTAAG",1,13.68,10.7,-0.06,0.18,2.96,1,0.01,">1 nonsynonymous","P54M N64V",2
"lib1","SARS-CoV-2","GATGTGTTAGTTAAGT",8,118.18,10.75,-0.01,0.04,2.97,1,0,">1 nonsynonymous","F12I T55D N120K",3
"lib1","SARS-CoV-2","GATGTGTTATACGTAC",8,41.69,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I2L N24R I80G N107G",4
"lib1","SARS-CoV-2","GATGTTAACCTTACAT",4,35.43,10.68,-0.08,0.11,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GATGTTACATCGGTTA",8,42.14,6.12,-4.64,1.23,1.5,1.28,0.05,">1 nonsynonymous","L57P D97K D137R",3
"lib1","SARS-CoV-2","GATGTTACCGTGCTTT",8,16.08,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","F17L V103T K128S",3
"lib1","SARS-CoV-2","GATGTTAGCCAACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7H S45H I88R K94* D98V S108N G166V",7
"lib1","SARS-CoV-2","GATGTTAGTTATAGAA",2,6.64,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","D90E V182L",2
"lib1","SARS-CoV-2","GATGTTATACAATGGG",2,22.66,9.83,-0.94,0.1,2.8,1.07,0,">1 nonsynonymous","L5P K26V F62W A81V T85E I104M T201I",7
"lib1","SARS-CoV-2","GATGTTATTGAGTCAC",1,24.59,8.04,-2.72,0.38,1.5,1.08,0.04,">1 nonsynonymous","A18M V32G F134A",3
"lib1","SARS-CoV-2","GATGTTATTTTGAAAA",11,3.79,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","GATGTTCCTCTTAAAA",9,92.36,9.45,-1.31,0.18,1.54,1.11,0.02,">1 nonsynonymous","F8Y Y50V",2
"lib1","SARS-CoV-2","GATGTTCGTACTGTAC",14,15.12,NA,NA,NA,NA,NA,NA,"stop","R27L Y50R D98W Y119* P149K Y175S",6
"lib1","SARS-CoV-2","GATGTTGCATCCCTCG",1,24.28,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","T3M V71S T100I K132L G152K L162G Q176L",7
"lib1","SARS-CoV-2","GATGTTGCATGAATAT",2,86.92,10.34,-0.42,0.05,2.87,1.01,0,"1 nonsynonymous","Q79M",1
"lib1","SARS-CoV-2","GATGTTGCCACAATAT",7,94.79,6,-4.76,1.29,1.5,1.14,0.01,">1 nonsynonymous","V11N S108E R136C I142N C150D V173L",6
"lib1","SARS-CoV-2","GATGTTGCCGACAACT",1,73.43,7.87,-2.89,0.14,2.27,1.14,0.01,"1 nonsynonymous","C158Q",1
"lib1","SARS-CoV-2","GATGTTGGTGTCATAC",4,67.05,6.77,-3.99,0.33,1.5,1.12,0.02,">1 nonsynonymous","N30E C158Q",2
"lib1","SARS-CoV-2","GATGTTGTGCGCCACA",5,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L L122A C150L T201R",4
"lib1","SARS-CoV-2","GATGTTGTGCTAATAG",2,84.57,6.18,-4.58,0.55,1.5,1.13,0.01,">1 nonsynonymous","V37T I88E",2
"lib1","SARS-CoV-2","GATGTTTATAGCACCT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","S19V N40G D112W Q144A F156N F167V Y178*",7
"lib1","SARS-CoV-2","GATGTTTATGATGTAG",5,52.91,6.5,-4.26,0.55,1.5,1.14,0.03,">1 nonsynonymous","D68R T100V",2
"lib1","SARS-CoV-2","GATGTTTCCCCAATTC",4,14.28,9.49,-1.27,0.27,1.65,1.17,0.03,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","GATGTTTGATGAAATT",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98N T148L P197V",3
"lib1","SARS-CoV-2","GATGTTTTCACGAGAC",6,30.54,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N92A P149R V181F",3
"lib1","SARS-CoV-2","GATTAAAAAAGATATG",3,14.2,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S19L Y91S",2
"lib1","SARS-CoV-2","GATTAAAAAAGCGCTC",5,79.08,10.81,0.05,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTAAAAAGAGAACA",6,34.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E Y66D S69M G86N K132Y",5
"lib1","SARS-CoV-2","GATTAAAAATCATACA",4,2.29,NA,NA,NA,NA,NA,NA,"stop","N24K N92* Q176L P197E",4
"lib1","SARS-CoV-2","GATTAAAATATGCTGT",1,37.24,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S45R K56A D90G G146R P161S",5
"lib1","SARS-CoV-2","GATTAAACATATCATT",1,7.25,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T46H I138S P161L",3
"lib1","SARS-CoV-2","GATTAAACCTGGTGGA",4,42.86,10.16,-0.6,0.08,2.51,1.03,0,">1 nonsynonymous","V20A P133A",2
"lib1","SARS-CoV-2","GATTAAAGACTTATGC",3,0.7,NA,NA,NA,NA,NA,NA,"stop","R16* S147G",2
"lib1","SARS-CoV-2","GATTAAAGCTTCCGTT",1,6.94,9.48,-1.28,0.32,2.23,1,0.03,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","GATTAAAGTGTTGATC",3,9.91,9.06,-1.71,0.24,1.93,1.08,0.03,">1 nonsynonymous","N1S G9R Y39A D90H N120Y",5
"lib1","SARS-CoV-2","GATTAAAGTTAATGGG",4,35.36,10.77,0,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTAAATAAAATCGG",4,55.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1L I28P A89Q L122N",4
"lib1","SARS-CoV-2","GATTAAATATCTCTGA",4,40.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25C G86T",2
"lib1","SARS-CoV-2","GATTAAATGTAAATGT",1,77.13,10.78,0.01,0.06,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GATTAAATTCAAAGAA",1,3.79,NA,NA,NA,NA,NA,NA,"stop","P7* S19V N64M R127A",4
"lib1","SARS-CoV-2","GATTAAATTCCGGAGA",9,221.72,10.14,-0.62,0.05,2.71,1.01,0,">1 nonsynonymous","A67Y T100V",2
"lib1","SARS-CoV-2","GATTAAATTTGCTAAC",3,69.2,10.59,-0.18,0.04,2.85,1.04,0,">1 nonsynonymous","P54G E154N",2
"lib1","SARS-CoV-2","GATTAACAAAGGCATG",5,184.31,10.72,-0.04,0.05,2.85,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTAACAATACGCCT",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M K128Y",2
"lib1","SARS-CoV-2","GATTAACAATCCACCT",8,29.76,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","A22V N64R P96R A105L G152V",5
"lib1","SARS-CoV-2","GATTAACACTTAACCG",15,2.56,NA,NA,NA,NA,NA,NA,"stop","W106* V181R",2
"lib1","SARS-CoV-2","GATTAACGGAGCAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T Y39N L95H T148A",4
"lib1","SARS-CoV-2","GATTAACTAGCCCACA",2,15.58,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N4S Y35R Y50M T63R",4
"lib1","SARS-CoV-2","GATTAACTTACTAACT",1,84.25,6,-4.76,1.1,1.5,1.22,0.01,">1 nonsynonymous","R27G K94L S164N Q176S",4
"lib1","SARS-CoV-2","GATTAAGAGAAGTTTT",12,160.26,6.47,-4.29,0.21,1.5,1.16,0,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","GATTAAGAGAGTTGGG",2,17.95,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F44S D112A",2
"lib1","SARS-CoV-2","GATTAAGAGGGTGCTA",6,52.75,7.95,-2.81,0.32,1.5,1.11,0.04,">1 nonsynonymous","N64D N107S Y121L G174W",4
"lib1","SARS-CoV-2","GATTAAGCAGGCAGAA",4,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S L95T F156H",3
"lib1","SARS-CoV-2","GATTAAGCTCCTAGTA",8,24.71,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","L5Q S69E L95P G117I T148M",5
"lib1","SARS-CoV-2","GATTAAGTATCAATTC",2,4.92,NA,NA,NA,NA,NA,NA,"stop","S45L I104*",2
"lib1","SARS-CoV-2","GATTAATACACGACAG",2,22.28,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","A81C D137F I142F",3
"lib1","SARS-CoV-2","GATTAATACAGGATAC",6,106.44,10.2,-0.57,0.05,2.91,1.02,0,"1 nonsynonymous","G155L",1
"lib1","SARS-CoV-2","GATTAATAGAAATCAT",6,7.96,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y93L S113A E135W C150N",4
"lib1","SARS-CoV-2","GATTAATAGAGGAAGC",1,4.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P54T",1
"lib1","SARS-CoV-2","GATTAATAGTTCGAGA",1,0.68,NA,NA,NA,NA,NA,NA,"stop","A42S N92*",2
"lib1","SARS-CoV-2","GATTAATGTAAGAATA",1,44.84,9.56,-1.2,0.15,1.72,1.21,0.01,">1 nonsynonymous","A33R Q163C S184K",3
"lib1","SARS-CoV-2","GATTAATTAACGAATA",3,0.69,NA,NA,NA,NA,NA,NA,"stop","K26T Y121* V173S",3
"lib1","SARS-CoV-2","GATTAATTCGACTAAA",8,93.73,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11I K26A A89Y D97V N107A N130T I138M",7
"lib1","SARS-CoV-2","GATTAATTCTTTCGAC",1,24.16,10.16,-0.6,0.07,2.78,1.02,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","GATTAATTTAAGAGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144M",1
"lib1","SARS-CoV-2","GATTACAACATCATCT",1,13.12,6,-4.76,0.86,1.5,1.14,0.01,">1 nonsynonymous","G83V F99L C195Q K199M",4
"lib1","SARS-CoV-2","GATTACAATAAAGGAA",3,35.18,6,-4.76,1.58,1.5,1.12,0.02,">1 nonsynonymous","S53G C158M",2
"lib1","SARS-CoV-2","GATTACACAAGACTCA",6,9.02,NA,NA,NA,NA,NA,NA,"stop","I2* A14N Q84R",3
"lib1","SARS-CoV-2","GATTACACTTTTTATA",8,0.7,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib1","SARS-CoV-2","GATTACAGACCATCCT",3,34.29,10.12,-0.64,0.14,2.44,1.06,0.01,">1 nonsynonymous","A42F A105C",2
"lib1","SARS-CoV-2","GATTACAGGTCTCGTT",2,14.66,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F8L I28P K48I G117L",4
"lib1","SARS-CoV-2","GATTACAGTCCAATCA",3,63.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14T G101L E135I Y175F",4
"lib1","SARS-CoV-2","GATTACATAAACCCCG",6,87.28,10.22,-0.55,0.07,2.5,1.01,0,">1 nonsynonymous","I28G P197M",2
"lib1","SARS-CoV-2","GATTACATAGAGGTTG",2,52.31,10.25,-0.51,0.11,2.79,1.02,0.01,">1 nonsynonymous","Y39W S129L E141G S200V",4
"lib1","SARS-CoV-2","GATTACATGCCAAACC",9,60.62,7.33,-3.44,0.25,1.5,1.08,0.02,">1 nonsynonymous","F12D W106V V153T F160Q",4
"lib1","SARS-CoV-2","GATTACATGGGTCAGC",3,45.25,8.22,-2.55,0.19,2.35,1.12,0.01,">1 nonsynonymous","N58P L111Y Y119W G152T",4
"lib1","SARS-CoV-2","GATTACCATCAATTGA",2,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L F44G T63S G116R N130T L162K R179F",7
"lib1","SARS-CoV-2","GATTACCATCCTACTG",1,70.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37L N92K",2
"lib1","SARS-CoV-2","GATTACCCAACAGACT",2,33.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I28M Y35G G74D A105S N118F",5
"lib1","SARS-CoV-2","GATTACCGAAGTGGGT",9,107.19,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","R25L L57D D98K W106L",4
"lib1","SARS-CoV-2","GATTACCGAATAAATA",1,2.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","GATTACCGCCGTCAAT",1,9.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17A G146W T201M",3
"lib1","SARS-CoV-2","GATTACCGCTTATCTA",4,46.99,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D59R Y91S Y143S V173N",4
"lib1","SARS-CoV-2","GATTACCGTTTGCCTT",5,165.67,10.74,-0.03,0.05,2.93,1.05,0,"1 nonsynonymous","N64P",1
"lib1","SARS-CoV-2","GATTACCTAAGCTATT",5,41.17,6,-4.76,2,3,1.2,0,">1 nonsynonymous","D34Y N64S D90T G146I",4
"lib1","SARS-CoV-2","GATTACCTTAACCGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T63A S69R W106A K132*",4
"lib1","SARS-CoV-2","GATTACGACTGATCAT",7,140.66,9.94,-0.82,0.07,1.98,1.08,0,">1 nonsynonymous","T55F N64R Y93F",3
"lib1","SARS-CoV-2","GATTACGACTTGACAA",2,15.15,10.53,-0.23,0.07,2.93,1.06,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","GATTACGCTTAAACAG",1,37.75,10.72,-0.05,0.03,2.86,1.09,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","GATTACGGATACCATG",6,84.38,10.13,-0.63,0.08,2.62,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GATTACGGGGCCTGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1W V20A A33* K87E T100I N130W",6
"lib1","SARS-CoV-2","GATTACGTTGTATGTG",3,2.26,NA,NA,NA,NA,NA,NA,"stop","T15V Y93F I104*",3
"lib1","SARS-CoV-2","GATTACTACGCCCGTG",3,5.68,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N13I K87D C158D",3
"lib1","SARS-CoV-2","GATTACTCGTTTGACT",1,143.11,10.12,-0.64,0.04,2.9,1.01,0,">1 nonsynonymous","T100R P161S",2
"lib1","SARS-CoV-2","GATTACTTAGTATCAT",1,51.12,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37T F47E T148P T201L",4
"lib1","SARS-CoV-2","GATTACTTCTATCATT",12,149.97,9.88,-0.89,0.1,2.51,1.05,0,">1 nonsynonymous","T55W G152I A190V",3
"lib1","SARS-CoV-2","GATTACTTGATCCTAG",1,42.7,10.77,0.01,0.07,2.83,1.1,0,">1 nonsynonymous","G9A A42E",2
"lib1","SARS-CoV-2","GATTAGAAAACTAACC",8,95.87,8.57,-2.2,0.11,2.94,1.04,0.01,"1 nonsynonymous","N157R",1
"lib1","SARS-CoV-2","GATTAGAAACAGTATA",3,71.46,8.4,-2.37,0.13,1.63,1.1,0.01,">1 nonsynonymous","S36I F44N I104M",3
"lib1","SARS-CoV-2","GATTAGAATCACAATC",6,23.2,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I2W A81T K94P C102F E186T",5
"lib1","SARS-CoV-2","GATTAGAATGCTAGAT",1,16.77,9.49,-1.28,0.18,1.83,1.17,0.01,">1 nonsynonymous","A33C D68H K198P",3
"lib1","SARS-CoV-2","GATTAGACACTCAAAT",5,40.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Q79A I104S Y175A A190T",4
"lib1","SARS-CoV-2","GATTAGACGCTTAGCA",2,12.63,10.71,-0.06,0.05,2.98,1,0,">1 nonsynonymous","N4H S129N",2
"lib1","SARS-CoV-2","GATTAGACGTTTCCCA",1,0.62,NA,NA,NA,NA,NA,NA,"stop","R16F A33L Y66L R73C P161Y V173D K198* T201M",8
"lib1","SARS-CoV-2","GATTAGAGACGTGGTT",6,60.15,6.18,-4.58,0.55,1.5,1.12,0.01,">1 nonsynonymous","R124P T140S",2
"lib1","SARS-CoV-2","GATTAGAGATTCATGA",5,9.47,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A22N G51V D59N D68C S139Y",5
"lib1","SARS-CoV-2","GATTAGAGCATCATCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N G166A G174K",3
"lib1","SARS-CoV-2","GATTAGATTTATGACG",1,12.82,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50T D97N Y143S",3
"lib1","SARS-CoV-2","GATTAGCATTAGCAGT",7,17.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A42G T55F D98L Y143N G196A",5
"lib1","SARS-CoV-2","GATTAGCGCCGACCTT",4,26.59,6,-4.76,2,3,1.06,0,">1 nonsynonymous","P54E P96A W106I E154W",4
"lib1","SARS-CoV-2","GATTAGCGCTACAAAC",15,83.21,10.65,-0.11,0.04,2.86,1.1,0,">1 nonsynonymous","I2V T140I",2
"lib1","SARS-CoV-2","GATTAGCTACTTAACG",2,17.12,6.02,-4.75,0.7,2.54,1.13,0.01,">1 nonsynonymous","Y50Q C61N V182C K198V",4
"lib1","SARS-CoV-2","GATTAGGAAACAACCA",7,0.91,NA,NA,NA,NA,NA,NA,"stop","W23* G86W",2
"lib1","SARS-CoV-2","GATTAGGAAAGGAAAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","C49* W106R T201P",3
"lib1","SARS-CoV-2","GATTAGGAATGAACTG",7,2.58,NA,NA,NA,NA,NA,NA,"stop","L5M Q84* Y175M",3
"lib1","SARS-CoV-2","GATTAGGACACCATTA",1,96.6,10.77,0,0.04,2.93,1.01,0,"1 nonsynonymous","L38F",1
"lib1","SARS-CoV-2","GATTAGGACTACGAAA",1,27.41,10.29,-0.48,0.11,2.9,1.06,0,"1 nonsynonymous","N30M",1
"lib1","SARS-CoV-2","GATTAGGAGCTTATCA",3,16.66,10.67,-0.09,0.09,2.91,1.01,0,">1 nonsynonymous","Y35V A42V",2
"lib1","SARS-CoV-2","GATTAGGGAGCGGGAG",11,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W F44S N92T V103Q N107G",5
"lib1","SARS-CoV-2","GATTAGGGTACATCGA",6,59.36,10.74,-0.03,0.06,2.92,1.06,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","GATTAGGTCAATACGG",5,51.75,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F8V G101C",2
"lib1","SARS-CoV-2","GATTAGTAATTAGACT",4,10.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16M F99C",2
"lib1","SARS-CoV-2","GATTAGTCATTACGAA",2,66.36,9.97,-0.79,0.1,2.35,1.06,0,">1 nonsynonymous","D34A I104L S129V S200I",4
"lib1","SARS-CoV-2","GATTAGTCCAGCTTTG",4,69.66,9.25,-1.51,0.21,1.5,1.07,0.02,">1 nonsynonymous","V77R E135S",2
"lib1","SARS-CoV-2","GATTAGTCGAAACTGA",9,284.02,6.63,-4.14,0.4,1.5,1.16,0.02,">1 nonsynonymous","K56R G166Q Q176E",3
"lib1","SARS-CoV-2","GATTAGTCTTCAAATA",3,96.11,10.55,-0.22,0.07,2.87,1.02,0,">1 nonsynonymous","N1T S108T",2
"lib1","SARS-CoV-2","GATTAGTGATTATACA",7,18.39,6,-4.76,2,3,1.14,0.02,">1 nonsynonymous","D90H A105R L131I F134T",4
"lib1","SARS-CoV-2","GATTAGTGGCGAACAG",1,14.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62T S113Y F160I",3
"lib1","SARS-CoV-2","GATTAGTGTTTCACTA",4,74.8,10.79,0.02,0.05,2.97,1,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","GATTAGTTGCATCATG",1,0.33,NA,NA,NA,NA,NA,NA,"stop","V52C G86* P169C",3
"lib1","SARS-CoV-2","GATTATAAACAGGCTA",6,80.31,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11Y L38K G51L C61G N107A",5
"lib1","SARS-CoV-2","GATTATAAACTGATTA",2,6.06,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N4H F44C D59L R127N S139C",5
"lib1","SARS-CoV-2","GATTATAAAGAGAAAC",3,24.02,6.53,-4.24,0.69,1.5,1.12,0.05,">1 nonsynonymous","Y50T P96T D112M I138W",4
"lib1","SARS-CoV-2","GATTATAAATAGTTAT",4,124.99,10.69,-0.08,0.04,2.95,1.02,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","GATTATACATGCGTCA",4,11.47,6.41,-4.35,0.69,1.5,1.02,0.05,">1 nonsynonymous","L57V N118I R127M Q163L V173L",5
"lib1","SARS-CoV-2","GATTATACCATGACAG",1,15.88,6,-4.76,1.01,1.5,1.1,0.01,">1 nonsynonymous","R27G A81Q A89F I142S",4
"lib1","SARS-CoV-2","GATTATACGCATCATC",2,12.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49H A81L S200Y",3
"lib1","SARS-CoV-2","GATTATACTAATCCGA",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y K94D",2
"lib1","SARS-CoV-2","GATTATACTAATTCAA",2,24.11,8.55,-2.21,0.12,2.39,1.11,0.01,">1 nonsynonymous","F126W R136E S200P",3
"lib1","SARS-CoV-2","GATTATACTAGCGATG",5,58.2,9.55,-1.21,0.07,2.16,1.07,0,">1 nonsynonymous","N4S N120S E141R T148N G152I",5
"lib1","SARS-CoV-2","GATTATACTCCTCACG",9,53.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V71N A81G S129R T148Q G172N",5
"lib1","SARS-CoV-2","GATTATAGCCCCATTA",4,31.93,10.37,-0.39,0.06,2.82,1.09,0,"1 nonsynonymous","K48Y",1
"lib1","SARS-CoV-2","GATTATAGGAAATCAG",1,22.27,10.18,-0.58,0.13,2.77,1.02,0.01,">1 nonsynonymous","P96N K114M",2
"lib1","SARS-CoV-2","GATTATAGGGTTATGA",1,37.23,10.51,-0.25,0.04,2.91,1.07,0,">1 nonsynonymous","T15K N120F K128S P197S",4
"lib1","SARS-CoV-2","GATTATAGTCATAATA",2,6.9,9.78,-0.98,0.14,2.42,1.05,0.01,">1 nonsynonymous","T3V F134V",2
"lib1","SARS-CoV-2","GATTATATCCGATATG",6,38.27,6,-4.76,1.77,1.5,1.14,0.03,">1 nonsynonymous","W23V Y91C",2
"lib1","SARS-CoV-2","GATTATATTACGCCTG",8,72.47,6,-4.76,1.74,1.5,1.16,0.01,">1 nonsynonymous","D59I G86L",2
"lib1","SARS-CoV-2","GATTATCAAAGGAGCT",1,37.29,10.04,-0.72,0.12,2.11,1.01,0.01,">1 nonsynonymous","R27L S45F S139N",3
"lib1","SARS-CoV-2","GATTATCACCTAGGGC",1,13.13,7.95,-2.81,0.33,1.52,1.18,0.04,">1 nonsynonymous","V103T Y119I",2
"lib1","SARS-CoV-2","GATTATCATTATACAT",4,25.56,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","N118F R136F T170N",3
"lib1","SARS-CoV-2","GATTATCCACAATTAA",1,7.19,9.73,-1.04,0.17,2.31,1.04,0.01,">1 nonsynonymous","Y35K S129F",2
"lib1","SARS-CoV-2","GATTATCTACGCTGTC",3,31.22,10.68,-0.08,0.15,2.84,1.1,0.01,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","GATTATCTATTCTAAC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N4A F44* E141M",3
"lib1","SARS-CoV-2","GATTATGATGCTACCT",1,36.69,10.73,-0.03,0.06,2.95,1.03,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","GATTATGTAGACATCG",3,73.73,8.95,-1.82,0.08,2.75,1.12,0,">1 nonsynonymous","Y143L G152M",2
"lib1","SARS-CoV-2","GATTATGTCCACAACA",2,90.77,10.42,-0.34,0.06,2.84,1.08,0,"1 nonsynonymous","A18E",1
"lib1","SARS-CoV-2","GATTATGTTAAATCTT",2,27.12,6,-4.76,2,1.5,1.25,0.08,">1 nonsynonymous","L131R P169N",2
"lib1","SARS-CoV-2","GATTATTAATAGCTTA",1,2.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GATTATTACTATCTTG",3,1.83,NA,NA,NA,NA,NA,NA,"stop","T63L V77W V103* G174E",4
"lib1","SARS-CoV-2","GATTATTAGCCAGATT",7,34.48,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","P96H V103W I138L P169L",4
"lib1","SARS-CoV-2","GATTATTATGCATCTA",2,26.75,10.65,-0.12,0.14,2.82,1.07,0.01,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","GATTATTCCAAAAAGT",3,6.19,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K26N L60G P96I I104R F167N",5
"lib1","SARS-CoV-2","GATTATTCCCGCTGAA",1,28.4,9.87,-0.9,0.1,2.1,1,0,">1 nonsynonymous","V77Q I138M V173N",3
"lib1","SARS-CoV-2","GATTATTCGACTTTGA",4,8.57,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42W Y93T L183R",3
"lib1","SARS-CoV-2","GATTATTGAAATTAAT",12,51.15,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C49L I142Q F160H",3
"lib1","SARS-CoV-2","GATTATTGATAGCGTG",1,8.19,6.13,-4.64,2,3,1.08,0,">1 nonsynonymous","K56G G83F D90F D97I Y123M",5
"lib1","SARS-CoV-2","GATTATTGTTGGAGAA",3,33.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S D137A",2
"lib1","SARS-CoV-2","GATTATTTAGCTACAC",7,171.43,10.71,-0.05,0.04,2.9,1.07,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","GATTATTTCCCAGTTA",5,60.46,6,-4.76,2,3,1.15,0,"1 nonsynonymous","G172M",1
"lib1","SARS-CoV-2","GATTATTTTAAAACCA",2,5,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13E C49I K132A N171D",4
"lib1","SARS-CoV-2","GATTCAAACTGACCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F99C L122* V173M",3
"lib1","SARS-CoV-2","GATTCAAAGACTTGAA",2,7.73,8.13,-2.64,0.37,1.5,1.34,0.04,">1 nonsynonymous","F12S C61I",2
"lib1","SARS-CoV-2","GATTCAAAGCAAGTGG",1,38.29,10.75,-0.01,0.07,2.98,1.01,0,">1 nonsynonymous","K26T C61S",2
"lib1","SARS-CoV-2","GATTCAACCGATCCCT",2,101.53,10.25,-0.51,0.02,2.88,1,0,">1 nonsynonymous","V11T S129N",2
"lib1","SARS-CoV-2","GATTCAAGAACAACGT",2,13.74,10.09,-0.67,0.1,2.85,1,0.01,">1 nonsynonymous","L5V S41D Y121S S139T",4
"lib1","SARS-CoV-2","GATTCAAGAACATAGA",3,37.42,6.64,-4.13,0.34,1.5,1.15,0.02,">1 nonsynonymous","F44Y Q144H Q176K",3
"lib1","SARS-CoV-2","GATTCAAGAATGCATT",1,25.14,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","C31L K94P",2
"lib1","SARS-CoV-2","GATTCAAGAGAAACCG",2,21.74,10.71,-0.05,0.05,2.96,1,0,">1 nonsynonymous","D97L N120F",2
"lib1","SARS-CoV-2","GATTCAATAGAGTGCT",5,104.79,9.12,-1.64,0.07,2.81,1.1,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","GATTCAATTTAGCTTG",6,143.43,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14L C31K Q84S P96Y R124H F134T",6
"lib1","SARS-CoV-2","GATTCACAGGAACTAG",1,2.86,NA,NA,NA,NA,NA,NA,"stop","I28* Y91T S184I",3
"lib1","SARS-CoV-2","GATTCACAGTGAATAA",1,10.8,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","E10G Y50T Y93A G152P",4
"lib1","SARS-CoV-2","GATTCAGAAGGGACCA",11,156.55,9.95,-0.81,0.06,2.76,1.05,0,">1 nonsynonymous","L5Y N30T L125W",3
"lib1","SARS-CoV-2","GATTCAGAGAACATAT",1,1.13,NA,NA,NA,NA,NA,NA,"stop","Y91F L188*",2
"lib1","SARS-CoV-2","GATTCAGAGAATCCAG",1,8.79,10.27,-0.5,0.15,2.94,1.02,0,">1 nonsynonymous","L60R P169S K199I",3
"lib1","SARS-CoV-2","GATTCAGCGGGGGAAT",1,3.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105Q",1
"lib1","SARS-CoV-2","GATTCAGTAACTCCAT",1,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L A81T Y93D V173S",4
"lib1","SARS-CoV-2","GATTCATAACATAAAC",5,71.74,6,-4.76,2,2.65,1.09,0,">1 nonsynonymous","D68Q Y143H",2
"lib1","SARS-CoV-2","GATTCATAAGATTAAT",3,19.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62L G83F D90F N107G S129Y V153L F185Y",7
"lib1","SARS-CoV-2","GATTCATAATCAATCC",3,13.78,10.89,0.12,0.09,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCATACCCTCAAC",4,113.24,10.77,0,0.07,2.93,1.02,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GATTCATCCTCACGAT",9,3.24,NA,NA,NA,NA,NA,NA,"stop","W106* N109V V180G",3
"lib1","SARS-CoV-2","GATTCATTATAAATTA",2,25.49,9.96,-0.81,0.23,2.14,1,0.02,">1 nonsynonymous","D90K G155Y",2
"lib1","SARS-CoV-2","GATTCATTTATTATGG",6,64.77,8.48,-2.28,0.25,1.5,1.1,0.02,">1 nonsynonymous","A33L R127T",2
"lib1","SARS-CoV-2","GATTCATTTGCTCAGA",3,53.52,6.94,-3.83,0.33,1.5,1.08,0.02,">1 nonsynonymous","Q79L Y91L V181I F185L",4
"lib1","SARS-CoV-2","GATTCCAAACATGGCT",3,28.51,10.7,-0.06,0.06,2.85,1.09,0,"1 nonsynonymous","N4Y",1
"lib1","SARS-CoV-2","GATTCCAAGTATCTAC",4,22.18,10.6,-0.16,0.09,2.85,1.08,0,">1 nonsynonymous","S36R D90S",2
"lib1","SARS-CoV-2","GATTCCACAGTCATGA",5,40.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38R V103W T140N",3
"lib1","SARS-CoV-2","GATTCCAGAGTCATAA",9,155.8,10.24,-0.52,0.05,2.83,1.04,0,">1 nonsynonymous","R16W S41L R78H N120H",4
"lib1","SARS-CoV-2","GATTCCATACAAATGA",8,60.17,6,-4.76,2,1.5,1.19,0,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GATTCCATCGAAAGCC",7,64.3,6.68,-4.09,0.4,1.5,1.16,0.02,">1 nonsynonymous","R27S S45C L57Y T100R S108I E135P",6
"lib1","SARS-CoV-2","GATTCCCACACATAAT",3,7.23,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","R73V F99A Y175S S184F",4
"lib1","SARS-CoV-2","GATTCCCACAGAAAAT",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T A67I",2
"lib1","SARS-CoV-2","GATTCCCACTTGCCTA",3,47.41,10.02,-0.75,0.09,2.35,1.02,0,">1 nonsynonymous","S36Y D90F",2
"lib1","SARS-CoV-2","GATTCCCCTTCTGTAT",7,32.65,9.76,-1,0.19,1.99,1.03,0.01,">1 nonsynonymous","A81G D90W F126L",3
"lib1","SARS-CoV-2","GATTCCCTTGATCACG",1,0.22,NA,NA,NA,NA,NA,NA,"stop","V32E Q84V F99*",3
"lib1","SARS-CoV-2","GATTCCCTTTACCTAA",5,54.42,6,-4.76,1.36,1.5,1.12,0.01,">1 nonsynonymous","S45V P161L P177T",3
"lib1","SARS-CoV-2","GATTCCGCATTGCAGT",22,379.94,10.84,0.07,0.06,2.91,1.06,0,"1 nonsynonymous","V173K",1
"lib1","SARS-CoV-2","GATTCCGGAAGTGATG",2,59.63,9.68,-1.09,0.1,2.85,1.09,0,"1 nonsynonymous","L125N",1
"lib1","SARS-CoV-2","GATTCCGGAATCTTCA",8,48.34,8.32,-2.45,0.17,1.5,1.23,0.01,">1 nonsynonymous","T3S A33L E135T G155F",4
"lib1","SARS-CoV-2","GATTCCGGACTAACTA",5,60.89,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R25W Y91I",2
"lib1","SARS-CoV-2","GATTCCGTAGGATAAA",6,41.74,6,-4.76,2,3,1.23,0,">1 nonsynonymous","F8L K56E I80T D90M I142S",5
"lib1","SARS-CoV-2","GATTCCGTCCAAAAAC",2,39.97,10.73,-0.04,0.08,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCCGTTCATAAGT",5,41.2,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G101S A105T",2
"lib1","SARS-CoV-2","GATTCCGTTTTAATAG",2,6.58,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T55Y N64S L95N",3
"lib1","SARS-CoV-2","GATTCCTGAGCCCAAT",1,0.58,NA,NA,NA,NA,NA,NA,"stop","F44L F70* Y121L V173L",4
"lib1","SARS-CoV-2","GATTCCTTAGCTAACT",7,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31K D90P",2
"lib1","SARS-CoV-2","GATTCCTTATACCTAC",3,24.3,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S41T G51Y P96W",3
"lib1","SARS-CoV-2","GATTCCTTGTGTTATA",6,193.53,10.7,-0.07,0.04,2.92,1.04,0,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","GATTCGAGAGGAAAAT",2,22.67,10.42,-0.34,0.14,2.65,1,0.01,">1 nonsynonymous","D34P K56I",2
"lib1","SARS-CoV-2","GATTCGATATAGCGAT",5,69.44,10.78,0.01,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCGATCGTACTCA",7,192.07,10.74,-0.02,0.07,2.93,1.04,0,">1 nonsynonymous","Y39R T148Q",2
"lib1","SARS-CoV-2","GATTCGCAAACATAGA",3,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S41V I88Q D112A",4
"lib1","SARS-CoV-2","GATTCGCACTAGTAAA",4,63.36,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","G9L F62K I72R P149D",4
"lib1","SARS-CoV-2","GATTCGCCTATACTTA",9,59.16,10.63,-0.13,0.11,2.76,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCGCTGAAAGACT",1,36.74,8.55,-2.22,0.3,1.79,1.18,0.04,">1 nonsynonymous","T100S E141N G146C",3
"lib1","SARS-CoV-2","GATTCGGCACGCCAGC",9,195.94,10.56,-0.21,0.08,2.86,1.03,0,">1 nonsynonymous","L60G L111E T201N",3
"lib1","SARS-CoV-2","GATTCGGGGAGTGCTG",6,99.28,9.94,-0.82,0.05,2.91,1.02,0,">1 nonsynonymous","G155R G174R",2
"lib1","SARS-CoV-2","GATTCGGGTGACCTAG",3,8.94,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I28L E76S T85S N118I",4
"lib1","SARS-CoV-2","GATTCGGTTTACTAAG",8,67.94,9.4,-1.37,0.38,1.5,1,0.06,">1 nonsynonymous","G101C T201A",2
"lib1","SARS-CoV-2","GATTCGTAAAAAACTA",7,92.33,10.68,-0.08,0.06,2.89,1.06,0,">1 nonsynonymous","F8L P149H",2
"lib1","SARS-CoV-2","GATTCGTAATAGGTTT",3,24.52,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Y21L W106F R136S T148R",4
"lib1","SARS-CoV-2","GATTCGTAATTGCGCA",5,23.28,6,-4.76,1.85,1.5,1.2,0.04,">1 nonsynonymous","C61L A89D",2
"lib1","SARS-CoV-2","GATTCGTACTTAAATA",4,102.86,10.57,-0.19,0.05,2.88,1.06,0,"1 nonsynonymous","S184F",1
"lib1","SARS-CoV-2","GATTCGTAGAGTTAAT",6,63.62,10.41,-0.35,0.06,2.79,1.06,0,">1 nonsynonymous","E10S E141P",2
"lib1","SARS-CoV-2","GATTCTAAAATCGACA",2,53.54,10.62,-0.14,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCTAAACCAAGGC",6,44.19,6,-4.76,2,1.5,1.34,0.06,"1 nonsynonymous","I88N",1
"lib1","SARS-CoV-2","GATTCTAAGCCGCCAC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","L5E T100G C150*",3
"lib1","SARS-CoV-2","GATTCTAATTGTTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P82A E135*",2
"lib1","SARS-CoV-2","GATTCTACATAACATT",2,55.32,10.67,-0.09,0.07,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GATTCTACATTCCGCA",5,46.37,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","L57W I104L S113M N120R",4
"lib1","SARS-CoV-2","GATTCTAGAAGAAGCA",1,31.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y50N K56L Q84T G152L P197S",5
"lib1","SARS-CoV-2","GATTCTAGGATACAGT",2,57.52,10.85,0.09,0.09,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTCTATATGCAGCA",1,70.39,8.28,-2.48,0.15,2.46,1.07,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","GATTCTATATTCGGAC",2,30.91,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R124C L183F K199V",3
"lib1","SARS-CoV-2","GATTCTATTAAGTGAA",2,33.09,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y123N F134S C150R",3
"lib1","SARS-CoV-2","GATTCTCAACCAACAA",1,5.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A89R G174L",3
"lib1","SARS-CoV-2","GATTCTCCACACACTG",4,11.97,6,-4.76,2,1.5,1.35,0.07,">1 nonsynonymous","P82S Y93N F99T",3
"lib1","SARS-CoV-2","GATTCTCGACGAGAAA",8,45.87,9.83,-0.94,0.18,2.01,1.07,0.01,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","GATTCTCGGTAAATAT",4,39.42,10.35,-0.41,0.03,2.93,1.03,0,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","GATTCTCTTACACTAG",1,29.44,8.71,-2.05,0.1,2.91,1.09,0.01,">1 nonsynonymous","Y91L N120T",2
"lib1","SARS-CoV-2","GATTCTGAAATATTAG",7,70.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17R K56G F99M N120T G155R H189L",6
"lib1","SARS-CoV-2","GATTCTGCCATACGAT",8,93.6,10.75,-0.02,0.06,2.89,1.05,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","GATTCTGGAAAGGTAT",3,28.55,10.63,-0.14,0.08,2.9,1.06,0,"1 nonsynonymous","Y39N",1
"lib1","SARS-CoV-2","GATTCTGGATACGAAC",7,5.61,NA,NA,NA,NA,NA,NA,"stop","K56* N64E H189R",3
"lib1","SARS-CoV-2","GATTCTGGTACCAACC",3,3.45,NA,NA,NA,NA,NA,NA,"stop","S41P T85V E154* S164A",4
"lib1","SARS-CoV-2","GATTCTGTACGAAACC",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55R A105G R127H E141I",4
"lib1","SARS-CoV-2","GATTCTTACGATCTCC",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A P96F E141F T148F G174M",5
"lib1","SARS-CoV-2","GATTCTTCTTTAAATC",2,19.01,10.18,-0.58,0.06,2.96,1,0,"1 nonsynonymous","I142W",1
"lib1","SARS-CoV-2","GATTGAAAACCCAGAA",2,15.67,9.63,-1.14,0.16,2.04,1,0.01,">1 nonsynonymous","T15F S29F K128Q",3
"lib1","SARS-CoV-2","GATTGAAAACTAGCGG",4,69.17,6.97,-3.8,0.38,1.5,1.2,0.03,">1 nonsynonymous","C6Y I80V F167Y",3
"lib1","SARS-CoV-2","GATTGAAAATGGAGCA",3,39.37,10.58,-0.19,0.06,2.85,1.03,0,">1 nonsynonymous","Y39W L60H Y66T P149T",4
"lib1","SARS-CoV-2","GATTGAAAATTACATT",4,35.1,10.48,-0.29,0.06,2.93,1,0,">1 nonsynonymous","T55M G174M",2
"lib1","SARS-CoV-2","GATTGAAACAGACCCA",1,43.86,10.18,-0.58,0.05,2.91,1,0,">1 nonsynonymous","A145T P149G",2
"lib1","SARS-CoV-2","GATTGAAAGATATCCT",2,5.16,6.83,-3.93,0.54,3,1.03,0,">1 nonsynonymous","N30F S53F P82A F99G Y119V",5
"lib1","SARS-CoV-2","GATTGAAATAATTGTG",4,15.28,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L5V S45V C61E P82S V180I",5
"lib1","SARS-CoV-2","GATTGAAATATTGTAA",2,21.97,10.68,-0.08,0.12,2.88,1.09,0.01,"1 nonsynonymous","A42P",1
"lib1","SARS-CoV-2","GATTGAACAGGTCGTA",4,53.44,7.67,-3.1,0.25,1.5,1.1,0.02,">1 nonsynonymous","F12S L38P K114W",3
"lib1","SARS-CoV-2","GATTGAACCAAAAAAG",7,37.67,6.57,-4.19,0.45,1.5,1.19,0.03,">1 nonsynonymous","F47V T85F F99L L122T V181L",5
"lib1","SARS-CoV-2","GATTGAACGGCCCATA",10,185.29,10.33,-0.44,0.04,2.93,1.01,0,"1 nonsynonymous","C6D",1
"lib1","SARS-CoV-2","GATTGAACGTGAAACG",6,4.74,NA,NA,NA,NA,NA,NA,"stop","L5* D59Q",2
"lib1","SARS-CoV-2","GATTGAAGCAAAATTT",8,63.44,6,-4.76,2,3,1.14,0,">1 nonsynonymous","K94H T100I E141F P161N",4
"lib1","SARS-CoV-2","GATTGAAGGAAATTGT",7,116.57,10.63,-0.13,0.06,2.91,1.04,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","GATTGAATAAAAAACT",2,30.71,10.04,-0.72,0.04,2.88,1.1,0,">1 nonsynonymous","G9R A33W F47L G174S K199T",5
"lib1","SARS-CoV-2","GATTGAATAAATGATC",2,56.18,10.78,0.01,0.07,2.83,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGAATTAAATTGC",1,226.93,9.09,-1.67,0.07,2.6,1.11,0,">1 nonsynonymous","S36K C49V D97L N157G S184T",5
"lib1","SARS-CoV-2","GATTGAATTCACAGAT",1,46.62,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K114T F160R G172F",3
"lib1","SARS-CoV-2","GATTGACAGATTTTAG",5,78.15,10.45,-0.31,0.06,2.93,1.03,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","GATTGACCAAACTATG",3,37.99,10.67,-0.1,0.06,2.95,1.02,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","GATTGACCATCGCAAG",1,69.13,9.84,-0.92,0.09,2.84,1.03,0,"1 nonsynonymous","T170Y",1
"lib1","SARS-CoV-2","GATTGACTACGTTTAA",5,119.94,10.15,-0.61,0.05,2.8,1.02,0,">1 nonsynonymous","Y35A T140I",2
"lib1","SARS-CoV-2","GATTGACTTACTATGT",4,41.8,10.68,-0.09,0.15,2.65,1.19,0.01,">1 nonsynonymous","D59Q K114E",2
"lib1","SARS-CoV-2","GATTGAGAGCTTACGC",2,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G C6P T15M P96Q K114G F156Y",6
"lib1","SARS-CoV-2","GATTGAGATAACAAGA",6,101.9,10.65,-0.11,0.07,2.86,1.09,0,">1 nonsynonymous","N58G R78S",2
"lib1","SARS-CoV-2","GATTGAGCCTCACTCT",4,47.62,7.73,-3.04,0.2,1.76,1.08,0.01,">1 nonsynonymous","N120S R136T V153R G166L G174N",5
"lib1","SARS-CoV-2","GATTGAGCGAGCCAAA",11,105.37,8.82,-1.95,0.15,1.53,1.15,0.01,">1 nonsynonymous","Y66E F167Y",2
"lib1","SARS-CoV-2","GATTGAGTTTACTAAC",8,64.4,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F134R L183C",2
"lib1","SARS-CoV-2","GATTGATAAAACCATC",1,10.5,8.73,-2.04,0.18,2.16,1.05,0.02,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","GATTGATAAATAGATT",3,43.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29A V103C V173N",3
"lib1","SARS-CoV-2","GATTGATAATAGACAA",4,125.8,8.26,-2.51,0.17,1.77,1.11,0.01,">1 nonsynonymous","G152H Q176C",2
"lib1","SARS-CoV-2","GATTGATATCATTGTC",4,101.35,10.83,0.07,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGATGCTATTGAG",2,102.01,9.64,-1.12,0.11,1.91,1.07,0,">1 nonsynonymous","V11T Y91H",2
"lib1","SARS-CoV-2","GATTGATTGGCCAATA",5,40.62,6.26,-4.51,0.69,1.5,1.21,0.02,">1 nonsynonymous","Y91I W106S I142L",3
"lib1","SARS-CoV-2","GATTGATTGTAATCAG",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16P W23M E141N T148M",4
"lib1","SARS-CoV-2","GATTGCAAAGCTTAAG",7,33.92,6,-4.76,1.9,1.5,1.14,0.01,">1 nonsynonymous","L38V G86Y W106G Y121V K128A",5
"lib1","SARS-CoV-2","GATTGCAAGTACCGTA",7,77.74,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G83S N107S L162K",3
"lib1","SARS-CoV-2","GATTGCACACTCGGTG",2,24.26,10.28,-0.48,0.05,2.94,1.08,0,">1 nonsynonymous","D75L T201K",2
"lib1","SARS-CoV-2","GATTGCACATGTATAC",5,15.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T55C I88K Y121P",3
"lib1","SARS-CoV-2","GATTGCACCAAGACCT",11,177.04,10.75,-0.02,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGCACTACGATTT",11,228.82,8.36,-2.4,0.12,2.43,1.08,0.01,">1 nonsynonymous","V37S G146L",2
"lib1","SARS-CoV-2","GATTGCCAACATTTCT",4,134.75,10.67,-0.09,0.03,2.95,1.01,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","GATTGCCAATTTTAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","A42* A105R",2
"lib1","SARS-CoV-2","GATTGCCAGACGCACG",3,15.96,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I88G E135G",2
"lib1","SARS-CoV-2","GATTGCCAGCCACCGA",3,0.75,NA,NA,NA,NA,NA,NA,"stop","G86C N110L E141* V153*",4
"lib1","SARS-CoV-2","GATTGCCATTACCAAA",2,31.73,10.41,-0.36,0.1,2.85,1,0,">1 nonsynonymous","C61L Y143F E186K",3
"lib1","SARS-CoV-2","GATTGCCCCTGAAAGC",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q G51R D90C S139G C158R",5
"lib1","SARS-CoV-2","GATTGCCCTCTGAAGT",12,102.49,6,-4.76,2,1.73,1.19,0.01,">1 nonsynonymous","Y35R Y91W Y119L",3
"lib1","SARS-CoV-2","GATTGCCGAAGTTGAT",1,35.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9S Y66L V180R",3
"lib1","SARS-CoV-2","GATTGCCTATTTTACG",5,83.85,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C61F E135D P149C F156V Q176V",5
"lib1","SARS-CoV-2","GATTGCCTTCCTATAA",2,20.65,8.95,-1.81,0.1,2.15,1.06,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","GATTGCGAAATTATCC",2,11.79,8.18,-2.59,0.21,1.63,1.16,0.01,">1 nonsynonymous","D112N K198H",2
"lib1","SARS-CoV-2","GATTGCGGCGCCTAAT",4,112.04,10.18,-0.59,0.04,2.92,1.03,0,">1 nonsynonymous","R73M T201N",2
"lib1","SARS-CoV-2","GATTGCTACAAGCGCG",2,1,NA,NA,NA,NA,NA,NA,"stop","N13V Y50L N58T Y165*",4
"lib1","SARS-CoV-2","GATTGCTCAATAGTTT",1,60.04,10.01,-0.75,0.1,2.49,1.07,0,">1 nonsynonymous","Y35I P96Q",2
"lib1","SARS-CoV-2","GATTGCTGATCCAAAA",5,51.91,8.72,-2.04,0.24,1.5,1.08,0.02,">1 nonsynonymous","V71M D90F",2
"lib1","SARS-CoV-2","GATTGGAAATGAGTCA",12,51.13,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","N1Y K94A Q176P P191Y P197L",5
"lib1","SARS-CoV-2","GATTGGAACGGAGGTC",11,30.69,6,-4.76,2,1.5,1.24,0.08,">1 nonsynonymous","P82L C102R",2
"lib1","SARS-CoV-2","GATTGGAAGAAACGCG",3,35.8,6,-4.76,1.11,1.5,1.12,0.02,">1 nonsynonymous","L57K Y121R",2
"lib1","SARS-CoV-2","GATTGGACAAGCATTT",9,173.14,9.92,-0.84,0.06,2.14,1.01,0,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","GATTGGAGAGAGTGCA",3,12.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49F G83D Q144K S200P",4
"lib1","SARS-CoV-2","GATTGGAGTTCCAATA",7,134.5,10.68,-0.09,0.05,2.9,1.04,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","GATTGGAGTTTCCCTT",1,0.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160H",1
"lib1","SARS-CoV-2","GATTGGATTATGTTAT",7,49.13,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F44N V103R R179K",3
"lib1","SARS-CoV-2","GATTGGCGTATAAAGT",2,26.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94W",1
"lib1","SARS-CoV-2","GATTGGCTAAGAGATT",6,80.64,10.86,0.1,0.07,2.92,1.01,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","GATTGGCTTAAAAAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","I2* N120V I138K F160W",4
"lib1","SARS-CoV-2","GATTGGCTTTATATTG",1,24.36,10.47,-0.29,0.07,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGGGTGAGAATGC",3,37.07,10.91,0.14,0.1,2.84,1.09,0,">1 nonsynonymous","K26R Y39I L60S T100V",4
"lib1","SARS-CoV-2","GATTGGGTTCACGCTT",7,70.04,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y93C V115Q G152F Y178N",4
"lib1","SARS-CoV-2","GATTGGTGAGGTTGTC",8,3.06,NA,NA,NA,NA,NA,NA,"stop","D98* P133Q",2
"lib1","SARS-CoV-2","GATTGGTGTAATATGG",3,106.34,6,-4.76,1.41,1.5,1.15,0.01,">1 nonsynonymous","V11L K26S D90E Y119L F134E P149T P161W",7
"lib1","SARS-CoV-2","GATTGTAAAATTGAGA",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y D68G F156M",3
"lib1","SARS-CoV-2","GATTGTAACATTTACT",2,71.98,9.91,-0.85,0.04,2.88,1.03,0,">1 nonsynonymous","L60N Q168T",2
"lib1","SARS-CoV-2","GATTGTAACTGCTGTA",12,72.79,10.63,-0.13,0.05,2.88,1.06,0,"1 nonsynonymous","A42H",1
"lib1","SARS-CoV-2","GATTGTAATACTATAT",3,24.23,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","N40V A67G N118D F160M A190T",5
"lib1","SARS-CoV-2","GATTGTAGCCAATCAT",1,9.96,10.66,-0.11,0.14,2.89,1.11,0.01,">1 nonsynonymous","S45E I138V E186N",3
"lib1","SARS-CoV-2","GATTGTAGCCTTCGCT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","D59* K128C S200H",3
"lib1","SARS-CoV-2","GATTGTATAATAGAAA",8,67.34,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37K L95A W106Y F156T",4
"lib1","SARS-CoV-2","GATTGTATCCAACATT",5,181.57,6.29,-4.47,0.34,1.5,1.11,0.01,">1 nonsynonymous","A18N V37D W106R A145G P177G",5
"lib1","SARS-CoV-2","GATTGTATCCGGACGG",3,69.82,6.2,-4.56,0.79,1.5,1.23,0.02,">1 nonsynonymous","F17Y Y175K",2
"lib1","SARS-CoV-2","GATTGTATCGTAAGCT",2,11.78,10.76,-0.01,0.07,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGTCACATAAAAC",4,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S R124A S139L",3
"lib1","SARS-CoV-2","GATTGTCATTCTCCGC",1,15.23,10.11,-0.65,0.11,2.78,1.04,0.01,">1 nonsynonymous","S43Y C61S N107P",3
"lib1","SARS-CoV-2","GATTGTCCAATTTATA",3,36.88,10.83,0.06,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTGTCGCATGGTAA",1,59.94,10.82,0.06,0.07,2.93,1.05,0,"1 nonsynonymous","N151Q",1
"lib1","SARS-CoV-2","GATTGTCGCGGGCTAA",5,37.07,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S139N Y178G",2
"lib1","SARS-CoV-2","GATTGTCTAATTTGAG",4,1.83,NA,NA,NA,NA,NA,NA,"stop","G9S E10D K56E F134* F167C T201S",6
"lib1","SARS-CoV-2","GATTGTGAAGAGAGTA",2,6.92,6.58,-4.18,0.74,3,1.24,0.01,">1 nonsynonymous","A14S S43M T55N G74V",4
"lib1","SARS-CoV-2","GATTGTGTCGAGACTT",3,0.69,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","GATTGTTCATGTTTCG",9,161.25,10.34,-0.42,0.04,2.84,1.04,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","GATTGTTTACCGAGGT",1,21.88,10.74,-0.02,0.09,2.89,1.09,0,">1 nonsynonymous","V37I T201C",2
"lib1","SARS-CoV-2","GATTTAAAAAGTTTAA",1,48.79,10.2,-0.57,0.07,2.87,1,0,"1 nonsynonymous","K94C",1
"lib1","SARS-CoV-2","GATTTAAAAATAGAAC",3,111.1,9.06,-1.7,0.12,2.29,1.12,0.01,">1 nonsynonymous","Y35E S53T P169A",3
"lib1","SARS-CoV-2","GATTTAAAACAAGATG",8,44.36,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","T3N N58H R78L A105N Y119S",5
"lib1","SARS-CoV-2","GATTTAAAACAGATAA",2,16.81,6.94,-3.82,0.35,1.74,1.26,0.02,">1 nonsynonymous","C150L Q163Y",2
"lib1","SARS-CoV-2","GATTTAAACAACTCAT",3,38.53,9.89,-0.87,0.13,1.89,1.12,0.01,"1 nonsynonymous","W23S",1
"lib1","SARS-CoV-2","GATTTAAACCCTTCTC",1,14.98,6,-4.76,2,3,1.24,0,">1 nonsynonymous","F44S P82L",2
"lib1","SARS-CoV-2","GATTTAAATGCCTACA",2,15.65,10.67,-0.1,0.08,2.84,1.14,0,">1 nonsynonymous","Y35M A42R C61D",3
"lib1","SARS-CoV-2","GATTTAAATTCAACAA",5,120.21,9.25,-1.51,0.07,2.73,1.11,0,">1 nonsynonymous","N118S P133S",2
"lib1","SARS-CoV-2","GATTTAACAAAAATCG",6,12.92,6,-4.76,2,3,1.1,0.01,"1 nonsynonymous","G101T",1
"lib1","SARS-CoV-2","GATTTAACAAACACCA",8,68.24,6.02,-4.75,1.31,1.5,1.13,0.03,">1 nonsynonymous","C102S I138L",2
"lib1","SARS-CoV-2","GATTTAACCAAAGCTA",1,21.2,10.72,-0.04,0.08,2.92,1.07,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","GATTTAACCTTGCGAT",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98S Y178R",2
"lib1","SARS-CoV-2","GATTTAACGCAGTAAG",1,10.92,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6S K94I K198G",3
"lib1","SARS-CoV-2","GATTTAACGGCAGCGA",2,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K S139P G166Y",3
"lib1","SARS-CoV-2","GATTTAACTATAAACC",3,46.91,9.32,-1.44,0.08,2.7,1.22,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","GATTTAACTCAGATCT",1,11.5,9.64,-1.13,0.2,2.58,1,0.01,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","GATTTAAGAACGTGAT",8,138.79,9.97,-0.8,0.05,2.01,1.03,0,">1 nonsynonymous","N1T W106V",2
"lib1","SARS-CoV-2","GATTTAAGCAACCAAC",5,40.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L L131P N151Y",3
"lib1","SARS-CoV-2","GATTTAATATATAGTC",3,42.88,10.71,-0.05,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTTAATGGGGCCTA",3,49.99,9.37,-1.39,0.23,1.5,1.04,0.02,">1 nonsynonymous","D75Y S147N V181L",3
"lib1","SARS-CoV-2","GATTTAATTCGTTACC",1,48.43,10.37,-0.39,0.08,2.87,1.07,0,">1 nonsynonymous","T15N K56R",2
"lib1","SARS-CoV-2","GATTTAATTCGTTCCA",4,36.07,10.46,-0.31,0.07,2.93,1.03,0,"1 nonsynonymous","E186V",1
"lib1","SARS-CoV-2","GATTTACAACACCCTT",6,134.97,10.57,-0.2,0.05,2.92,1.03,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","GATTTACAACATCCGA",5,77.84,9.95,-0.82,0.07,2.44,1.04,0,">1 nonsynonymous","T3N C31V N171I",3
"lib1","SARS-CoV-2","GATTTACAAGAAATAA",4,28.93,8.95,-1.82,0.28,1.61,1.26,0.03,">1 nonsynonymous","F12D Y39M",2
"lib1","SARS-CoV-2","GATTTACAATATATAA",4,190.43,8.23,-2.53,0.18,1.89,1.14,0.01,">1 nonsynonymous","P7G N13L G117E",3
"lib1","SARS-CoV-2","GATTTACAATGTCTGA",4,83.3,10.82,0.06,0.08,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GATTTACAGAAACCCG",2,81.42,7.4,-3.36,0.21,1.6,1.08,0.01,">1 nonsynonymous","G9I Y175L A192S",3
"lib1","SARS-CoV-2","GATTTACCTACTGATA",3,11.49,6.31,-4.46,0.97,1.5,1.02,0.05,">1 nonsynonymous","A14R A22W I80W",3
"lib1","SARS-CoV-2","GATTTACGAACTGGGG",2,41.3,10.18,-0.59,0.08,2.81,1,0,">1 nonsynonymous","C6N K132L",2
"lib1","SARS-CoV-2","GATTTACGCAGCCCAA",4,0.94,NA,NA,NA,NA,NA,NA,"stop","N4R S36* I88S P96Q F126V",5
"lib1","SARS-CoV-2","GATTTAGACAAAATTC",1,13.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90V G116M P149L",3
"lib1","SARS-CoV-2","GATTTAGATAGCGAGG",2,59.02,10.22,-0.55,0.07,2.7,1.01,0,"1 nonsynonymous","Y93F",1
"lib1","SARS-CoV-2","GATTTAGCCATTGGTT",3,136.05,9.24,-1.53,0.09,2.43,1.11,0,"1 nonsynonymous","Y165I",1
"lib1","SARS-CoV-2","GATTTAGCCCTCGATG",2,54.38,10.49,-0.28,0.05,2.86,1.04,0,">1 nonsynonymous","S41F T100W L122M",3
"lib1","SARS-CoV-2","GATTTAGGACAACATA",3,14.36,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33P K94P T148H",3
"lib1","SARS-CoV-2","GATTTAGTGGAAACAT",10,51.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H A22P T148S",3
"lib1","SARS-CoV-2","GATTTAGTTGGTCTGT",7,52.17,9.46,-1.3,0.09,1.86,1.13,0,">1 nonsynonymous","C61L I88M",2
"lib1","SARS-CoV-2","GATTTATAAAGGAATG",6,2.68,NA,NA,NA,NA,NA,NA,"stop","Y35* K87E",2
"lib1","SARS-CoV-2","GATTTATACCAACTAT",7,73.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A22R R124T",2
"lib1","SARS-CoV-2","GATTTATCTCCATCGG",3,69.49,10.82,0.06,0.06,2.92,1.03,0,">1 nonsynonymous","K26V T85N I104Y F160K",4
"lib1","SARS-CoV-2","GATTTATTGCTATCGC",5,104.04,10.66,-0.1,0.1,2.85,1.03,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","GATTTATTGGATCGCT",2,61.61,10.65,-0.12,0.03,2.95,1,0,">1 nonsynonymous","N1P S43L K87T N110T",4
"lib1","SARS-CoV-2","GATTTATTGGGTTAAA",5,55.43,10.64,-0.12,0.05,2.89,1.06,0,">1 nonsynonymous","F62P K199W",2
"lib1","SARS-CoV-2","GATTTCAACTAGTCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","R27M S41C G101* T201Q",4
"lib1","SARS-CoV-2","GATTTCAACTCCCTGT",5,76.78,10.64,-0.12,0.12,2.75,1.22,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GATTTCAAGCGGCAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","C49L T55W D97* G117P",4
"lib1","SARS-CoV-2","GATTTCACACTCGCTT",3,44.35,8.73,-2.03,0.16,1.5,1.13,0.01,">1 nonsynonymous","W23M N130H",2
"lib1","SARS-CoV-2","GATTTCACATACACGT",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L A18W G51S L162G F167W",5
"lib1","SARS-CoV-2","GATTTCACCTGGCAAA",9,0.96,NA,NA,NA,NA,NA,NA,"stop","L5P A33K V52Q C61N D98* N107F",6
"lib1","SARS-CoV-2","GATTTCCAAACAAACA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S A42E Y66V A89L D112L",5
"lib1","SARS-CoV-2","GATTTCCACAGCACCT",5,93.55,10.62,-0.14,0.06,2.81,1.02,0,">1 nonsynonymous","N130A P149V V173L A190P",4
"lib1","SARS-CoV-2","GATTTCCAGTTATTTA",11,187.79,6,-4.76,2,1.5,1.3,0.02,"1 nonsynonymous","G172T",1
"lib1","SARS-CoV-2","GATTTCCATATCACAC",2,87.47,8.96,-1.81,0.12,2.02,1.1,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","GATTTCCCTAAGAAAA",1,31.81,8.57,-2.19,0.12,2.57,1.18,0.01,">1 nonsynonymous","D90E Y119L",2
"lib1","SARS-CoV-2","GATTTCCCTTGACTTT",6,130.89,10.66,-0.11,0.04,2.91,1.03,0,">1 nonsynonymous","D97Y T100R",2
"lib1","SARS-CoV-2","GATTTCCTACAAACTA",1,40.64,10.67,-0.09,0.05,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GATTTCCTGAGTTTCC",5,22.85,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","S41I F62T S69M W106R",4
"lib1","SARS-CoV-2","GATTTCCTTTCCAAGC",7,97.44,10.11,-0.65,0.05,2.69,1.1,0,">1 nonsynonymous","G9M F44R",2
"lib1","SARS-CoV-2","GATTTCGAGATCTTTA",8,63.65,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V37L G86A A105V Y143L",4
"lib1","SARS-CoV-2","GATTTCGCGGACCACC",2,39.33,9.66,-1.1,0.05,2.67,1.14,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","GATTTCGGATACACTT",4,40.71,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","C6N G86T Y119L",3
"lib1","SARS-CoV-2","GATTTCTAACCCAACT",3,10.74,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","I2L G86N N107C Q144G E154V",5
"lib1","SARS-CoV-2","GATTTCTACGGATATG",1,16.28,8,-2.77,0.43,1.5,1,0.06,">1 nonsynonymous","G86R Y91I",2
"lib1","SARS-CoV-2","GATTTCTATATTAATA",2,0.89,NA,NA,NA,NA,NA,NA,"stop","V32* T85N F134Q S147G",4
"lib1","SARS-CoV-2","GATTTCTCGTGAGTAA",2,95.91,10.69,-0.08,0.05,2.9,1.04,0,">1 nonsynonymous","P149A G174N",2
"lib1","SARS-CoV-2","GATTTCTGAATAAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* Y123S",2
"lib1","SARS-CoV-2","GATTTCTTATATTCTT",1,0.73,NA,NA,NA,NA,NA,NA,"stop","P7A V11I C31* N40R Y66G V77G K94I G152S K198R",9
"lib1","SARS-CoV-2","GATTTGAATGCACTCA",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P F134I Q144F",3
"lib1","SARS-CoV-2","GATTTGACCCCTATGG",1,10.66,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I104K G152L",2
"lib1","SARS-CoV-2","GATTTGAGATTCTAAA",2,2.79,NA,NA,NA,NA,NA,NA,"stop","Q84F K114E N120* G196V",4
"lib1","SARS-CoV-2","GATTTGAGCCGACAGG",1,0.93,NA,NA,NA,NA,NA,NA,"stop","N40* N120M E141D",3
"lib1","SARS-CoV-2","GATTTGAGCCGCATTA",10,129.67,10.16,-0.6,0.06,2.52,1,0,">1 nonsynonymous","R27L V71I V103I V173R",4
"lib1","SARS-CoV-2","GATTTGAGCCGTGACA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","F17S N58* Y159I",3
"lib1","SARS-CoV-2","GATTTGCAAAAGAACA",3,46.83,9.82,-0.95,0.08,1.8,1.09,0,">1 nonsynonymous","F17A N64R Q168W",3
"lib1","SARS-CoV-2","GATTTGCCAACGACTC",10,186.6,10.77,0.01,0.06,2.94,1.03,0,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","GATTTGCCTCTTTTAT",1,3.61,NA,NA,NA,NA,NA,NA,"stop","K56* A89G Y121P V181M",4
"lib1","SARS-CoV-2","GATTTGCTAGATTCCG",3,115.03,10.66,-0.1,0.04,2.89,1.07,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","GATTTGGACGTCCATT",5,49.47,10.17,-0.6,0.09,2.82,1.05,0,">1 nonsynonymous","A105T T140V",2
"lib1","SARS-CoV-2","GATTTGTCACTCTTTC",3,25.12,6.15,-4.62,1.02,1.5,1.23,0.03,">1 nonsynonymous","G9E G86Q D98M",3
"lib1","SARS-CoV-2","GATTTGTCGAGACACG",5,86.46,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L5A C31T Y159R",3
"lib1","SARS-CoV-2","GATTTGTTCCGCCGCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M Y119P T201G",3
"lib1","SARS-CoV-2","GATTTTAAAAAAACAG",4,27.59,6.03,-4.74,0.68,1.5,1.11,0.01,">1 nonsynonymous","A105S V180S",2
"lib1","SARS-CoV-2","GATTTTAAAGACATAA",7,101.81,10.61,-0.15,0.06,2.86,1.07,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","GATTTTAACGTATTAA",2,51.02,10.86,0.1,0.1,2.91,1.05,0,"1 nonsynonymous","T100Y",1
"lib1","SARS-CoV-2","GATTTTACACTATAGC",6,33.03,6,-4.76,1.64,1.5,1.16,0.02,">1 nonsynonymous","N13I A81L T85M R127N T140K P161H",6
"lib1","SARS-CoV-2","GATTTTACCTCACCTT",5,0.94,NA,NA,NA,NA,NA,NA,"stop","F12N V37H C49* T55S F126L",5
"lib1","SARS-CoV-2","GATTTTACGATCTAAC",1,7.46,6.51,-4.25,0.42,1.5,1.06,0.03,">1 nonsynonymous","I2Q G9S S29K T55N V71G N120Y V181Y",7
"lib1","SARS-CoV-2","GATTTTACTCTGGTTA",1,67.54,8.85,-1.92,0.1,2.12,1.1,0,">1 nonsynonymous","T55P S129Y I142S",3
"lib1","SARS-CoV-2","GATTTTAGAAAACTGA",7,40.27,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P82T S129N V182T A190F K198T",5
"lib1","SARS-CoV-2","GATTTTAGGGGAGGGA",4,44.88,10.66,-0.11,0.05,2.93,1,0,">1 nonsynonymous","D97F N120K",2
"lib1","SARS-CoV-2","GATTTTATAACGATAA",2,6.2,10.75,-0.01,0.13,2.98,1.14,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","GATTTTATACCACTTT",1,6.6,6,-4.76,2,1.5,1.04,0.05,">1 nonsynonymous","F99L N107I V153D P161K",4
"lib1","SARS-CoV-2","GATTTTATGAAGCTAT",1,7.05,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S19M F70I K87T L95I F160Y",5
"lib1","SARS-CoV-2","GATTTTCCACGTTTGT",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142Y Y175F",2
"lib1","SARS-CoV-2","GATTTTCCTCGACTAA",4,35.92,9.17,-1.59,0.13,2.18,1.12,0.01,">1 nonsynonymous","L5Y S41I T140L V173P",4
"lib1","SARS-CoV-2","GATTTTCGTGGGACTA",6,125.9,10.71,-0.05,0.07,2.91,1.09,0,"1 nonsynonymous","I2Q",1
"lib1","SARS-CoV-2","GATTTTGAAATGCCAA",5,24.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41Q A89I",2
"lib1","SARS-CoV-2","GATTTTGAAATTGCAA",5,0.86,NA,NA,NA,NA,NA,NA,"stop","F44P T85A K94Y L131P Q176*",5
"lib1","SARS-CoV-2","GATTTTGAAGCACCGG",8,17.8,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T15P L95I I104Q G166R S200M",5
"lib1","SARS-CoV-2","GATTTTGCACCTTTCG",2,19.21,10.11,-0.66,0.12,2.25,1,0.01,">1 nonsynonymous","K128A R136I G196W",3
"lib1","SARS-CoV-2","GATTTTGGGAGTTATG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H Y91R V173G",3
"lib1","SARS-CoV-2","GATTTTGGGCAATAGC",6,1,NA,NA,NA,NA,NA,NA,"stop","G51M L95T L122G C158*",4
"lib1","SARS-CoV-2","GATTTTGTGACAAAAT",8,181.34,10.68,-0.09,0.05,2.83,1.05,0,">1 nonsynonymous","L5P T63V L122G Q163L",4
"lib1","SARS-CoV-2","GATTTTTAAGAACTGA",10,0.36,NA,NA,NA,NA,NA,NA,"stop","D34R T100S Y165G V173R S184*",5
"lib1","SARS-CoV-2","GATTTTTATATCAAAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","GATTTTTCGCTCCCAT",1,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57V A105L",2
"lib1","SARS-CoV-2","GATTTTTGATATACAT",5,114,10.06,-0.7,0.03,2.87,1.06,0,">1 nonsynonymous","Y35R S43K F156A",3
"lib1","SARS-CoV-2","GATTTTTGTGATTATT",5,79.56,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R136T Y178E",2
"lib1","SARS-CoV-2","GATTTTTTGCAGTGAT",4,44.9,10.56,-0.21,0.07,2.95,1,0,">1 nonsynonymous","A42M L60T P191D",3
"lib1","SARS-CoV-2","GCAAAAAACAACTTCG",5,20.81,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N13I R73Q T100F S139K A145M F156V S164I",7
"lib1","SARS-CoV-2","GCAAAAAACAATGAAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","T3S Y35V Q176R K198*",4
"lib1","SARS-CoV-2","GCAAAAAAGGGCGATC",3,9.81,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N120L G146P G155L",3
"lib1","SARS-CoV-2","GCAAAAAATAACAGGT",1,8.44,9.84,-0.93,0.25,2.1,1.03,0.01,">1 nonsynonymous","G9T S41Y C61Y R136Y",4
"lib1","SARS-CoV-2","GCAAAAAATACCACAT",4,37.93,10.42,-0.34,0.08,2.86,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","GCAAAAAATTGCAACA",2,10.63,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N64V G74M P96F",3
"lib1","SARS-CoV-2","GCAAAAACAAAAAAAA",3,2.51,NA,NA,NA,NA,NA,NA,"stop","T3A G116* R127M",3
"lib1","SARS-CoV-2","GCAAAAACAATGTTCT",3,15.95,6.54,-4.22,0.83,1.5,1.17,0.06,">1 nonsynonymous","V103N T201E",2
"lib1","SARS-CoV-2","GCAAAAACAGCGACCA",4,71.94,10.19,-0.58,0.05,2.81,1.02,0,">1 nonsynonymous","Y121V P197H",2
"lib1","SARS-CoV-2","GCAAAAACTAATAAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib1","SARS-CoV-2","GCAAAAACTATGTTCA",1,33.13,6.06,-4.7,1.2,1.5,1.12,0.04,">1 nonsynonymous","V20E I72V T85M T100M Y119N F156M",6
"lib1","SARS-CoV-2","GCAAAAAGAATTGTAT",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P P82T D97F",3
"lib1","SARS-CoV-2","GCAAAAAGATATTAGA",5,12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46V P54C T85L L162Y",4
"lib1","SARS-CoV-2","GCAAAAAGCAGTAATT",4,49.95,10.01,-0.75,0.09,2.61,1.01,0,">1 nonsynonymous","S139I A190H",2
"lib1","SARS-CoV-2","GCAAAAAGGGCAAAAA",5,82.03,10.79,0.02,0.06,2.92,1.04,0,"1 nonsynonymous","K199P",1
"lib1","SARS-CoV-2","GCAAAAAGTCTAATCA",3,35.79,9.85,-0.92,0.14,2.03,1.05,0.01,">1 nonsynonymous","T15F N110S E141L",3
"lib1","SARS-CoV-2","GCAAAAATCCCAACAA",1,18.13,8.39,-2.38,0.2,2.84,1.18,0.02,">1 nonsynonymous","G9S K87M S113Q",3
"lib1","SARS-CoV-2","GCAAAAATGGCCGACT",2,0.88,NA,NA,NA,NA,NA,NA,"stop","Y50F L60R G86S G152*",4
"lib1","SARS-CoV-2","GCAAAAATGTTTACCG",4,15.88,10.83,0.06,0.08,2.89,1.11,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","GCAAAAATTTTAGATG",10,3.35,NA,NA,NA,NA,NA,NA,"stop","S69* L131R Q176*",3
"lib1","SARS-CoV-2","GCAAAACAAAGTCGTA",1,13.98,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","N4F K26P D97Y F134Y G155Y",5
"lib1","SARS-CoV-2","GCAAAACAATCAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6G A18G A33L F62R F167*",5
"lib1","SARS-CoV-2","GCAAAACACCATACAA",2,40.85,9.29,-1.48,0.08,2.82,1.07,0,">1 nonsynonymous","C61L G117S",2
"lib1","SARS-CoV-2","GCAAAACCAAACCTTT",3,22.95,8.21,-2.55,0.31,1.5,1.17,0.05,">1 nonsynonymous","D90Y G116A E135H",3
"lib1","SARS-CoV-2","GCAAAACCAATCCAAC",2,20.34,6.48,-4.28,0.67,1.5,1.12,0.05,"1 nonsynonymous","I72W",1
"lib1","SARS-CoV-2","GCAAAACCCTACCTAC",4,29.96,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N13D S19L D98S P161L",4
"lib1","SARS-CoV-2","GCAAAACCTACGAAAC",7,50.39,8.81,-1.95,0.16,1.78,1.14,0.01,">1 nonsynonymous","K56V D98S R127G",3
"lib1","SARS-CoV-2","GCAAAACCTAGACCAC",2,75.42,9.07,-1.7,0.08,2.63,1.13,0,">1 nonsynonymous","G146C Q163T",2
"lib1","SARS-CoV-2","GCAAAACCTCATTACT",3,58.77,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37L T63N F99S S129L P149T C158M",6
"lib1","SARS-CoV-2","GCAAAACCTTCCAGTA",3,67.87,10.7,-0.06,0.06,2.87,1.05,0,"1 nonsynonymous","K128A",1
"lib1","SARS-CoV-2","GCAAAACTAAGCCACG",3,27.22,6,-4.76,2,3,1.13,0,">1 nonsynonymous","E76D L122T F134P S200L",4
"lib1","SARS-CoV-2","GCAAAACTTTGCTCGA",1,19.9,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F12W G83V A89Q R136K P149K",5
"lib1","SARS-CoV-2","GCAAAAGAATGTTTGC",13,71.77,6.88,-3.88,0.35,1.5,1.15,0.02,">1 nonsynonymous","S19K R27S G166K",3
"lib1","SARS-CoV-2","GCAAAAGACATACATA",5,88.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23G S36L A81D E135A",4
"lib1","SARS-CoV-2","GCAAAAGACTTGAACG",5,0.26,NA,NA,NA,NA,NA,NA,"stop","K56T R73* R136E",3
"lib1","SARS-CoV-2","GCAAAAGATGACTAAA",2,66,10.18,-0.59,0.06,2.82,1.05,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","GCAAAAGCCGGGGCAC",2,0.69,NA,NA,NA,NA,NA,NA,"stop","Y35* A42L T55S V103F R127D S147T",6
"lib1","SARS-CoV-2","GCAAAAGCTCAAGACA",1,0.72,NA,NA,NA,NA,NA,NA,"stop","A14C R27S C49*",3
"lib1","SARS-CoV-2","GCAAAAGTACATTAAG",1,17.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85A F99V S113A S147A Y175K",5
"lib1","SARS-CoV-2","GCAAAAGTAGACGCCA",2,61.65,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N40V Y93T",2
"lib1","SARS-CoV-2","GCAAAAGTCATTTATG",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S S129C R179M",3
"lib1","SARS-CoV-2","GCAAAAGTGTTAAACC",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M C49I P149N",3
"lib1","SARS-CoV-2","GCAAAAGTTTCTTTCA",2,19.36,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","G86M G101E N120T",3
"lib1","SARS-CoV-2","GCAAAATACGCAATTG",3,62.44,10.14,-0.62,0.07,2.75,1.04,0,">1 nonsynonymous","L57S E154Q",2
"lib1","SARS-CoV-2","GCAAAATAGCATCTAG",2,100.5,10.16,-0.6,0.08,2.41,1.05,0,">1 nonsynonymous","A22C D98V T148V",3
"lib1","SARS-CoV-2","GCAAAATAGGTCTTTG",4,140.05,10.35,-0.42,0.05,2.95,1.02,0,">1 nonsynonymous","K87C P149L K198H",3
"lib1","SARS-CoV-2","GCAAAATATTTCCCCA",2,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122T I138L",2
"lib1","SARS-CoV-2","GCAAAATCTATTTTGC",1,8.85,10.01,-0.76,0.26,2.51,1.08,0.02,">1 nonsynonymous","N4L T85D",2
"lib1","SARS-CoV-2","GCAAAATGAAACTCCC",5,93.56,8.71,-2.05,0.12,2.67,1.11,0.01,">1 nonsynonymous","N107K F126I V153K",3
"lib1","SARS-CoV-2","GCAAAATTAACGCAAG",1,19.99,10.78,0.02,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAAATTTTGGCCTT",9,98.63,8.27,-2.5,0.12,2.71,1.11,0.01,">1 nonsynonymous","T55Y D98E L125A A145M E154S T170C",6
"lib1","SARS-CoV-2","GCAAACAAAACGCGGT",3,9.78,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N64K C102N",2
"lib1","SARS-CoV-2","GCAAACAAAACGGCGA",7,47.15,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35T C49V L95N F156M",4
"lib1","SARS-CoV-2","GCAAACAAACATGGAA",9,80.54,6.55,-4.21,0.49,1.5,1.22,0.02,">1 nonsynonymous","R25E N40R I138K",3
"lib1","SARS-CoV-2","GCAAACAACATACGAT",4,12.06,7.43,-3.33,0.39,1.5,1.28,0.04,">1 nonsynonymous","C61D V103L",2
"lib1","SARS-CoV-2","GCAAACAACATCTTAA",1,69.52,9.46,-1.3,0.15,1.93,1.09,0.01,">1 nonsynonymous","S53D K114L R136D",3
"lib1","SARS-CoV-2","GCAAACAAGAACAAAG",1,12.35,8.07,-2.7,0.26,1.54,1.09,0.02,"1 nonsynonymous","R127E",1
"lib1","SARS-CoV-2","GCAAACAATAATGTTC",4,22.8,10.84,0.08,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAACACTACCTCTA",8,65.99,10.71,-0.05,0.03,2.95,1.04,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GCAAACAGAAAACACA",2,27.72,10.41,-0.36,0.06,2.96,1.01,0,">1 nonsynonymous","S139R T201D",2
"lib1","SARS-CoV-2","GCAAACAGAAATCAGA",1,0.89,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GCAAACAGCACACAAT",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25Q A42N V52D T100Y D112Q",5
"lib1","SARS-CoV-2","GCAAACAGGGGGATTA",2,11.74,10.74,-0.03,0.1,2.9,1,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","GCAAACATAATTCATG",2,43.44,7.01,-3.75,0.34,1.5,1.22,0.02,">1 nonsynonymous","G116A G155I N157Q",3
"lib1","SARS-CoV-2","GCAAACATACTTAAAT",8,45.91,10,-0.76,0.09,2.53,1.08,0,"1 nonsynonymous","P133M",1
"lib1","SARS-CoV-2","GCAAACATAGATTAAC",14,248.36,8.16,-2.6,0.2,1.98,1.12,0.01,">1 nonsynonymous","V37E V71L F126K G174E S184Y",5
"lib1","SARS-CoV-2","GCAAACATATTAACCC",2,8.91,6.33,-4.43,0.77,1.5,1.12,0.02,">1 nonsynonymous","N64S I80R D98E F99M L188Y",5
"lib1","SARS-CoV-2","GCAAACATTATAATCA",6,0.31,NA,NA,NA,NA,NA,NA,"stop","F44* I104A",2
"lib1","SARS-CoV-2","GCAAACCAAAAACGCG",1,13.39,9.16,-1.61,0.17,2.5,1.09,0.02,">1 nonsynonymous","L5K F62L V77L G117Y I142V",5
"lib1","SARS-CoV-2","GCAAACCAAACGTCTG",4,86.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A18R Y159T",2
"lib1","SARS-CoV-2","GCAAACCATAGAATGA",3,15.68,6,-4.76,2,2.48,1.16,0.01,">1 nonsynonymous","F8L Q79K E135P G174F K199N",5
"lib1","SARS-CoV-2","GCAAACCATCCAGTCA",3,84.78,10.8,0.04,0.05,2.91,1.03,0,">1 nonsynonymous","I2R S53T",2
"lib1","SARS-CoV-2","GCAAACCGACAGCGCA",1,10.84,10.66,-0.1,0.16,2.78,1,0.01,">1 nonsynonymous","G9C Y91F T148I Q163V",4
"lib1","SARS-CoV-2","GCAAACCGTCACGTAT",5,2.12,NA,NA,NA,NA,NA,NA,"stop","N110L G174V K199*",3
"lib1","SARS-CoV-2","GCAAACCTCTAATTAT",3,34.39,10.79,0.02,0.07,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAACGAGGTCCTCG",7,153.93,10.71,-0.06,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAACGATAACGTAA",1,20.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12L G86N C150I",3
"lib1","SARS-CoV-2","GCAAACGGCGTTATAC",3,252.24,10.66,-0.11,0.03,2.94,1.04,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","GCAAACGTAAAGTAAT",6,142.16,10.31,-0.45,0.05,2.95,1.01,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","GCAAACGTCAATCAAC",10,156.27,10.71,-0.05,0.06,2.9,1.07,0,"1 nonsynonymous","L95I",1
"lib1","SARS-CoV-2","GCAAACTAAAAGCATA",1,6.36,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N40T A81R V103Y N130T S200T",5
"lib1","SARS-CoV-2","GCAAACTACAGCCCAG",1,39.51,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2M V20L A89K K128E R136L",5
"lib1","SARS-CoV-2","GCAAACTACCATGTAA",1,33.99,10.51,-0.26,0.08,2.9,1.08,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","GCAAACTACTATAAGA",4,31.29,10.16,-0.61,0.12,1.94,1,0.01,">1 nonsynonymous","S19K D98F L122Q",3
"lib1","SARS-CoV-2","GCAAACTCATATACAA",4,11.64,6.04,-4.73,1,1.5,1.22,0.04,">1 nonsynonymous","D34E T63L S113Y Y121M E141M Q168H",6
"lib1","SARS-CoV-2","GCAAACTCGAATGTCG",1,23.1,10.63,-0.13,0.14,2.78,1.11,0.01,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","GCAAAGAAAAACCAGG",1,17.87,10.2,-0.57,0.13,2.54,1,0.01,">1 nonsynonymous","G51V K199V",2
"lib1","SARS-CoV-2","GCAAAGAAACCCTCCG",5,30.94,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L5S D97V R124W",3
"lib1","SARS-CoV-2","GCAAAGACACGACGCC",1,60.86,10.79,0.02,0.06,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAAGACATTATGTT",3,50.94,10.77,0,0.08,2.85,1.12,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","GCAAAGACCAGGGCTC",3,25.11,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T46F G83I N92Y",3
"lib1","SARS-CoV-2","GCAAAGACCTGAGACT",3,72.84,10.77,0,0.07,2.84,1.12,0,"1 nonsynonymous","S164T",1
"lib1","SARS-CoV-2","GCAAAGACGTATAAGC",1,22.38,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L5I R25T I80P G166S",4
"lib1","SARS-CoV-2","GCAAAGAGTAATACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28V Y39* P82T G152D",4
"lib1","SARS-CoV-2","GCAAAGATATAGCAAA",6,3.34,NA,NA,NA,NA,NA,NA,"stop","S41E K48S T100W Y121P E141V T148* N151Y",7
"lib1","SARS-CoV-2","GCAAAGATCCCTTGAA",2,6.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A S129Y F185S",3
"lib1","SARS-CoV-2","GCAAAGCAGAACCTAG",12,30.72,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","N13F A89R N120C Q168T",4
"lib1","SARS-CoV-2","GCAAAGCATGCCATAT",2,26.76,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C61A G172H Y178C",3
"lib1","SARS-CoV-2","GCAAAGCATTAATTCA",13,269.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A14T D97H F160I Q176V",4
"lib1","SARS-CoV-2","GCAAAGCGAGAAATTA",1,17.26,10.64,-0.13,0.08,2.84,1.1,0,"1 nonsynonymous","N151Q",1
"lib1","SARS-CoV-2","GCAAAGCGCTCAACAC",7,81.76,10.6,-0.17,0.04,2.93,1.03,0,">1 nonsynonymous","G9L T100L",2
"lib1","SARS-CoV-2","GCAAAGCGTACTATAA",2,14.01,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","R16G G83T D90F K132N E141P",5
"lib1","SARS-CoV-2","GCAAAGGACAAAGAAA",4,27.69,10.78,0.02,0.1,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAAGGACACTGCAA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3S K56* F62N",3
"lib1","SARS-CoV-2","GCAAAGGATACTAGCG",11,88.28,10.36,-0.41,0.03,2.94,1.01,0,">1 nonsynonymous","L38V N120A",2
"lib1","SARS-CoV-2","GCAAAGGCAAAGGGAC",8,45.52,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","S41Y N92M L125V Q144E T201K",5
"lib1","SARS-CoV-2","GCAAAGGCCATTGGCT",19,118.7,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Q84N D112R",2
"lib1","SARS-CoV-2","GCAAAGGTGCTCCATC",5,42.72,8.31,-2.46,0.18,1.68,1.16,0.01,">1 nonsynonymous","S41C Y165L",2
"lib1","SARS-CoV-2","GCAAAGGTGGGGTTCA",1,15.99,10.18,-0.59,0.06,2.84,1.11,0,">1 nonsynonymous","D34N K87M",2
"lib1","SARS-CoV-2","GCAAAGTAATGAACAT",5,174.23,10.09,-0.67,0.05,2.6,1.04,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","GCAAAGTACAAACGGC",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K N107P R124K Q163G",4
"lib1","SARS-CoV-2","GCAAAGTACAAGTAGT",2,169.06,10.2,-0.56,0.02,2.92,1.02,0,">1 nonsynonymous","G9S E154V",2
"lib1","SARS-CoV-2","GCAAAGTACAGAATGT",4,106.38,10.77,0.01,0.05,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAAAGTTCATAAAAG",3,0.38,NA,NA,NA,NA,NA,NA,"stop","I2R W23R V103*",3
"lib1","SARS-CoV-2","GCAAAGTTCATGATCG",7,43,10.73,-0.04,0.07,2.8,1.11,0,">1 nonsynonymous","T55K K132H S139T",3
"lib1","SARS-CoV-2","GCAAAGTTTAGCGGAA",5,55.14,10.74,-0.03,0.09,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAATAAACTATAAT",2,1.5,NA,NA,NA,NA,NA,NA,"stop","D75N N107Y G152*",3
"lib1","SARS-CoV-2","GCAAATAAATAATGTT",3,114.39,10.44,-0.32,0.05,2.91,1.01,0,">1 nonsynonymous","I104C S113A",2
"lib1","SARS-CoV-2","GCAAATAACGATAACC",5,39.51,10.62,-0.14,0.08,2.77,1.19,0,"1 nonsynonymous","N1V",1
"lib1","SARS-CoV-2","GCAAATAACGATAGGG",8,100.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40P S69E E76R Y93H G166L",5
"lib1","SARS-CoV-2","GCAAATAATCCATTAA",5,98,10.73,-0.04,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAATAATGATGTAT",3,26.16,9.38,-1.38,0.14,2.55,1.14,0.01,">1 nonsynonymous","D97A G166M",2
"lib1","SARS-CoV-2","GCAAATAATTCTCGGC",1,42.87,9.98,-0.79,0.07,2.74,1.01,0,">1 nonsynonymous","D75V D98S T201M",3
"lib1","SARS-CoV-2","GCAAATACATGAGATA",2,29.77,9.29,-1.48,0.14,1.77,1.18,0.01,">1 nonsynonymous","L38P L60V",2
"lib1","SARS-CoV-2","GCAAATACCACACACC",3,7.64,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","S41L D68W G155R Q163R",4
"lib1","SARS-CoV-2","GCAAATAGACACGGAT",4,56.79,10.85,0.08,0.06,2.93,1.03,0,">1 nonsynonymous","S129R N171I",2
"lib1","SARS-CoV-2","GCAAATAGAGGGGTAA",1,18.49,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N110M G166V V181S",3
"lib1","SARS-CoV-2","GCAAATAGGTCTACCA",2,47.74,10.19,-0.57,0.06,2.82,1.01,0,">1 nonsynonymous","T3L E10S K56L",3
"lib1","SARS-CoV-2","GCAAATAGTGGTTAAC",12,238.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C6T N171K",2
"lib1","SARS-CoV-2","GCAAATATAATGACCA",10,270.04,9.94,-0.83,0.08,2.35,1.05,0,">1 nonsynonymous","I2R F47S",2
"lib1","SARS-CoV-2","GCAAATATATGGTGGA",3,8.76,6.21,-4.55,0.72,1.5,1.19,0.02,">1 nonsynonymous","G152R V181Y",2
"lib1","SARS-CoV-2","GCAAATATCAACACGT",2,31.52,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","A89L L122Y E154W",3
"lib1","SARS-CoV-2","GCAAATATTAACTTAT",4,23.92,6,-4.76,2,3,1.13,0,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","GCAAATATTAATTTGG",5,44.63,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","D59L G116L G117D R127L F167L",5
"lib1","SARS-CoV-2","GCAAATATTCAGAAAG",4,2.16,NA,NA,NA,NA,NA,NA,"stop","L95* P149Q",2
"lib1","SARS-CoV-2","GCAAATATTGGGGAAT",14,235.96,9.26,-1.51,0.09,2.37,1.1,0,">1 nonsynonymous","L57W K128L G174L",3
"lib1","SARS-CoV-2","GCAAATCAAAACACTA",8,161.74,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R25L S43M D59L N92L W106S G117T P177S",7
"lib1","SARS-CoV-2","GCAAATCACACGTTCA",3,16.19,9.67,-1.09,0.11,1.74,1.1,0.01,">1 nonsynonymous","D97Y W106K",2
"lib1","SARS-CoV-2","GCAAATCACCCCAAAC",9,119.17,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G9T T85P L95S G174S S184R",5
"lib1","SARS-CoV-2","GCAAATCACTGACCCC",2,97.07,10.66,-0.1,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAATCCATGGGACA",5,123.04,10.12,-0.64,0.08,2.7,1,0,">1 nonsynonymous","A18V T148S H189Y",3
"lib1","SARS-CoV-2","GCAAATCCTCAAGTCA",1,6.23,10.76,-0.01,0.05,3,1.02,0,">1 nonsynonymous","S41V L122T",2
"lib1","SARS-CoV-2","GCAAATCCTCTGTTAA",4,21.82,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","D68S A105K Y143V V153G",4
"lib1","SARS-CoV-2","GCAAATCGATATAAGA",2,18.54,9.75,-1.01,0.19,2.11,1.04,0.02,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","GCAAATCGCGAAACAC",2,69.72,10.13,-0.63,0.08,2.74,1.02,0,">1 nonsynonymous","E10L A81E",2
"lib1","SARS-CoV-2","GCAAATCGTATAATTA",13,181.17,10.22,-0.54,0.05,2.79,1.03,0,">1 nonsynonymous","P7T N13D C61T",3
"lib1","SARS-CoV-2","GCAAATCTAGCAGTAA",2,7.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T3I A14Y T55I D90S K114M Y123L T148L Y178L",8
"lib1","SARS-CoV-2","GCAAATGAAATTGTTG",2,32.3,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","C6N V153I C158S",3
"lib1","SARS-CoV-2","GCAAATGAAGTTACGG",2,16.83,6,-4.76,1.2,1.5,1.13,0.02,">1 nonsynonymous","V71R L122G Q144N P149T Q176T",5
"lib1","SARS-CoV-2","GCAAATGAGACACCTG",13,288.79,10.2,-0.57,0.05,2.81,1,0,">1 nonsynonymous","S53P L57V",2
"lib1","SARS-CoV-2","GCAAATGAGACTATTG",3,8.14,6,-4.76,2,1.5,1.1,0.02,"1 nonsynonymous","N92W",1
"lib1","SARS-CoV-2","GCAAATGCGTAGAGTT",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E D90H W106G P149L",4
"lib1","SARS-CoV-2","GCAAATGCTTTTCGTT",3,10.39,6,-4.76,2,3,1.11,0.02,">1 nonsynonymous","I2V D34V C61V Y93S G146L",5
"lib1","SARS-CoV-2","GCAAATGGAAAAACTG",2,49.14,10.61,-0.16,0.05,2.88,1.06,0,">1 nonsynonymous","P149D G152F",2
"lib1","SARS-CoV-2","GCAAATGGACCTATTA",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C S41C T140N T148N",4
"lib1","SARS-CoV-2","GCAAATGGGAGGACAC",1,13.22,10.68,-0.08,0.1,2.88,1,0,">1 nonsynonymous","Q84S N120W",2
"lib1","SARS-CoV-2","GCAAATGGTCAGTCTG",6,174.2,9.2,-1.57,0.14,1.6,1.12,0.01,">1 nonsynonymous","F8M G51V C61M",3
"lib1","SARS-CoV-2","GCAAATGTAATGCATT",1,16.26,10.74,-0.03,0.07,2.88,1.06,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","GCAAATGTACCCACGA",5,27.54,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C102W I138F",2
"lib1","SARS-CoV-2","GCAAATGTGAAGACGG",8,74.52,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F8N P82I",2
"lib1","SARS-CoV-2","GCAAATGTGAGGAACT",6,95.8,8.77,-2,0.07,2.79,1.1,0,">1 nonsynonymous","T100I G166F",2
"lib1","SARS-CoV-2","GCAAATTACGTAAACA",2,91.26,10.27,-0.49,0.09,2.74,1,0,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","GCAAATTATCTGGTTA",2,38.06,9.04,-1.73,0.12,2.84,1.09,0.01,">1 nonsynonymous","D97I Q144M N157G",3
"lib1","SARS-CoV-2","GCAAATTCCAACTGGC",7,105.49,7.48,-3.28,0.14,1.78,1.14,0.01,">1 nonsynonymous","G146P T170S",2
"lib1","SARS-CoV-2","GCAAATTCTTGGCCCA",2,60.89,10.78,0.02,0.08,2.9,1.07,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","GCAAATTGAACTGCTA",5,18.99,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","A33N T63Y R124S",3
"lib1","SARS-CoV-2","GCAAATTGATGTGCGG",5,181.65,10.2,-0.56,0.07,2.64,1.01,0,">1 nonsynonymous","Y35H Q163L",2
"lib1","SARS-CoV-2","GCAAATTGTTGATTTG",5,74.21,10.66,-0.11,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAATTTAGTTTTCC",10,206.22,8.71,-2.05,0.1,2.8,1.05,0,">1 nonsynonymous","K87R G166H A192T",3
"lib1","SARS-CoV-2","GCAAATTTCAAAAGCC",2,90.19,10.59,-0.17,0.04,2.96,1.01,0,">1 nonsynonymous","Y35P T55E V173L",3
"lib1","SARS-CoV-2","GCAACAAAAGGTATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104H R136G T170F",3
"lib1","SARS-CoV-2","GCAACAAAGATAATTT",6,2.02,NA,NA,NA,NA,NA,NA,"stop","S36* A67C D97Q N107C",4
"lib1","SARS-CoV-2","GCAACAAAGCAAGCAA",6,74.52,10.69,-0.08,0.04,2.92,1.04,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","GCAACAAATCTCATTC",2,17.06,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","F134D C150G",2
"lib1","SARS-CoV-2","GCAACAACAACAAATA",1,13.31,8.87,-1.89,0.16,2.47,1.11,0.01,">1 nonsynonymous","A22G R73K V153Y G166V",4
"lib1","SARS-CoV-2","GCAACAACGATACATT",1,29.75,10.29,-0.47,0.07,2.9,1.02,0,">1 nonsynonymous","A22T Y39R D98A I104F",4
"lib1","SARS-CoV-2","GCAACAACGTTGATGG",14,290.6,9.76,-1.01,0.08,2.12,1.07,0,">1 nonsynonymous","E10L Y35L S45T R136T",4
"lib1","SARS-CoV-2","GCAACAAGAGGCACGT",1,44.36,10.84,0.08,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACAAGTAGTCACG",3,45.36,8.8,-1.97,0.16,1.71,1.13,0.01,">1 nonsynonymous","L38S Q144T",2
"lib1","SARS-CoV-2","GCAACAATAATTCACT",8,155.31,8.33,-2.44,0.15,2.2,1.13,0.01,">1 nonsynonymous","F8W D59H Q176T",3
"lib1","SARS-CoV-2","GCAACAATCTATGTGG",13,92.03,10.47,-0.29,0.05,2.9,1.01,0,">1 nonsynonymous","V65M R136K E154N",3
"lib1","SARS-CoV-2","GCAACAATGGCATATG",1,8.67,7.24,-3.52,0.45,1.5,1.01,0.06,">1 nonsynonymous","T100P T148H",2
"lib1","SARS-CoV-2","GCAACAATTCAATTCC",2,42.33,10.84,0.08,0.09,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACAATTGCTGGAG",1,32.9,10.84,0.08,0.06,2.85,1.09,0,"1 nonsynonymous","N130R",1
"lib1","SARS-CoV-2","GCAACACAATGAAGAA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32I A89N V180E",3
"lib1","SARS-CoV-2","GCAACACCCCCGACCG",2,18.68,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N4Y T15V I80F R124L C158S V173M",6
"lib1","SARS-CoV-2","GCAACACCGCCCACCA",1,6.23,9.35,-1.41,0.35,2.09,1.14,0.03,">1 nonsynonymous","I88L E141I",2
"lib1","SARS-CoV-2","GCAACACGGTAACTGA",7,210.21,10.8,0.04,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACACTGTAACAAG",1,20.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8T C61S G86V G101L W106R Y119N F126D D137S Q168M",9
"lib1","SARS-CoV-2","GCAACACTTCCACAAG",1,21.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24T C31I G83Y K94A N107E R136F",6
"lib1","SARS-CoV-2","GCAACAGACATTATTT",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R K114P K128M",3
"lib1","SARS-CoV-2","GCAACAGAGATAAAAT",4,15.11,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","D90G N118D N157W",3
"lib1","SARS-CoV-2","GCAACAGCAAAACAAT",2,53.06,9.92,-0.85,0.06,2.37,1.01,0,"1 nonsynonymous","Q84W",1
"lib1","SARS-CoV-2","GCAACAGGTGGACTCT",11,151.43,9.58,-1.18,0.09,1.95,1.09,0,">1 nonsynonymous","S19T S36Q E141R",3
"lib1","SARS-CoV-2","GCAACATAGATATATC",2,35.65,7.91,-2.85,0.15,1.71,1.11,0.01,">1 nonsynonymous","T100G Y119L",2
"lib1","SARS-CoV-2","GCAACATCAAAAATCT",1,14.84,NA,NA,NA,NA,NA,NA,"stop","L5M G51A T85* P96R N130L",5
"lib1","SARS-CoV-2","GCAACATGATCAAATG",1,51.41,8.53,-2.24,0.12,2.74,1.02,0.01,">1 nonsynonymous","L122G N157C",2
"lib1","SARS-CoV-2","GCAACATGTTTACCTT",1,24.45,10.1,-0.66,0.14,2.04,1.05,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GCAACATTCGAACGAC",3,38.38,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","E10L S45M T170I",3
"lib1","SARS-CoV-2","GCAACATTGTAAAGAA",5,119.72,9.86,-0.91,0.07,2.38,1.04,0,">1 nonsynonymous","K56A K94V",2
"lib1","SARS-CoV-2","GCAACATTGTTCAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35F N157*",2
"lib1","SARS-CoV-2","GCAACCACCTTGAACT",2,4.61,NA,NA,NA,NA,NA,NA,"stop","Y66* L95H G101E",3
"lib1","SARS-CoV-2","GCAACCATAAACAACA",2,22.79,10.29,-0.47,0.08,2.83,1.06,0,">1 nonsynonymous","A105S L122M A145I",3
"lib1","SARS-CoV-2","GCAACCATAGGTAAGT",1,26.05,10.16,-0.61,0.07,3,1,0,">1 nonsynonymous","K56M C61M F156A",3
"lib1","SARS-CoV-2","GCAACCATCAAAAAAG",3,3.21,NA,NA,NA,NA,NA,NA,"stop","Y39* S45L G51A S139I",4
"lib1","SARS-CoV-2","GCAACCATCCAACAAC",4,1.46,NA,NA,NA,NA,NA,NA,"stop","S45* P54S F134A G166W Y175L",5
"lib1","SARS-CoV-2","GCAACCATTAATAGGT",1,19.96,10.54,-0.22,0.14,2.81,1,0.01,"1 nonsynonymous","P169S",1
"lib1","SARS-CoV-2","GCAACCCAAACCGCCA",4,43.35,6.13,-4.63,0.84,1.5,1.21,0.02,">1 nonsynonymous","N1G R78P N120C G146L",4
"lib1","SARS-CoV-2","GCAACCCATCAAAGTG",6,54.04,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V37W F62C W106E P177Q",4
"lib1","SARS-CoV-2","GCAACCCCCCCGCGCA",1,25.63,10.14,-0.62,0.07,2.86,1.05,0,">1 nonsynonymous","L5V K48I T55V V173L E186S",5
"lib1","SARS-CoV-2","GCAACCCGCGGTGCTG",2,23.78,8.3,-2.46,0.39,1.5,1.17,0.07,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","GCAACCCTACTCGAGT",4,32.84,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D75N T85S T100S I104W Q176C",5
"lib1","SARS-CoV-2","GCAACCCTACTTTGAG",5,17.26,10.08,-0.68,0.22,2.13,1.03,0.02,">1 nonsynonymous","T3R D97G K128G L162V",4
"lib1","SARS-CoV-2","GCAACCCTCTGCCGCA",2,68.45,10.74,-0.02,0.05,2.94,1.03,0,"1 nonsynonymous","N130Y",1
"lib1","SARS-CoV-2","GCAACCGATATGACCA",2,14.13,10.19,-0.58,0.07,2.69,1,0,">1 nonsynonymous","R27F C31F Q163A",3
"lib1","SARS-CoV-2","GCAACCGATGGATGTA",4,14.57,10.64,-0.12,0.08,2.98,1.01,0,">1 nonsynonymous","T55F A67L N151S",3
"lib1","SARS-CoV-2","GCAACCGCAAGCCACG",6,25.81,9.86,-0.9,0.15,2.09,1.07,0.01,">1 nonsynonymous","C6I D90S",2
"lib1","SARS-CoV-2","GCAACCGCATAATTTG",1,21.01,10.51,-0.25,0.08,3,1,0,">1 nonsynonymous","Y66R L122K V153Y",3
"lib1","SARS-CoV-2","GCAACCGTAACAACTT",1,6.21,6,-4.76,1.04,3,1.04,0.02,">1 nonsynonymous","P82S G101I G146K",3
"lib1","SARS-CoV-2","GCAACCGTTACGTAAG",4,43.54,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N13S L38R Q168D",3
"lib1","SARS-CoV-2","GCAACCTAAACAGACC",4,25.15,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6S F12L G117I Y123D Q144M",5
"lib1","SARS-CoV-2","GCAACCTAAAGAAAAA",2,54.9,10.49,-0.28,0.06,2.85,1.05,0,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","GCAACCTATTACGCGC",17,0.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y178A",1
"lib1","SARS-CoV-2","GCAACCTGAAAGAAAT",1,11.3,9.82,-0.94,0.1,2.99,1.03,0,">1 nonsynonymous","C6S P149H T201Y",3
"lib1","SARS-CoV-2","GCAACCTGCAGGGTGC",4,167.45,10.58,-0.18,0.05,2.89,1.05,0,"1 nonsynonymous","N30S",1
"lib1","SARS-CoV-2","GCAACCTTCCTCACAT",4,1.96,NA,NA,NA,NA,NA,NA,"stop","C49T D98R I104T K132*",4
"lib1","SARS-CoV-2","GCAACCTTTCATTAAA",4,65.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10K D34L Y121S",3
"lib1","SARS-CoV-2","GCAACGAAAAAAACAA",24,364.83,10.74,-0.02,0.06,2.92,1.05,0,"1 nonsynonymous","N40H",1
"lib1","SARS-CoV-2","GCAACGAACCATATGG",5,14.21,10.85,0.09,0.11,2.93,1.07,0,">1 nonsynonymous","R16F F44W",2
"lib1","SARS-CoV-2","GCAACGAACCCTCTGT",12,2.02,NA,NA,NA,NA,NA,NA,"stop","S45I K94R F99S A145V G146M C158W F167*",7
"lib1","SARS-CoV-2","GCAACGAACGAACTGA",3,14.89,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V37L T85Y V103R V153M",4
"lib1","SARS-CoV-2","GCAACGAATTGAAATC",4,52.43,10.07,-0.7,0.09,2.34,1.04,0,">1 nonsynonymous","T3P E10V D97F",3
"lib1","SARS-CoV-2","GCAACGACATGAAATT",4,12.34,8.33,-2.43,0.26,2.37,1.14,0.03,">1 nonsynonymous","N107E Y119G T201S",3
"lib1","SARS-CoV-2","GCAACGACCTTGACTT",1,8.28,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P7T G86A T100P R127T",4
"lib1","SARS-CoV-2","GCAACGACTCGATACA",4,11.17,6,-4.76,2,3,1.09,0,">1 nonsynonymous","C31Q C49K",2
"lib1","SARS-CoV-2","GCAACGATAAAGTACG",7,63.03,10.69,-0.07,0.07,2.93,1.04,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","GCAACGCAACAGTGAT",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I T85M V173A",3
"lib1","SARS-CoV-2","GCAACGGATATGCAAA",1,22.77,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C49R K132T",2
"lib1","SARS-CoV-2","GCAACGGCAAAATAAT",2,54.66,10.56,-0.2,0.1,2.73,1.04,0.01,">1 nonsynonymous","I2A Y39K S45H",3
"lib1","SARS-CoV-2","GCAACGGCTAACTATT",3,14.19,8.36,-2.4,0.38,1.5,1.14,0.06,">1 nonsynonymous","I2L N40H G74L D98N",4
"lib1","SARS-CoV-2","GCAACGGGCACGATTT",4,22.87,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44M R73L Q176L",3
"lib1","SARS-CoV-2","GCAACGTAAACTATCC",9,30.61,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G9V L95E W106E K114L K198F",5
"lib1","SARS-CoV-2","GCAACGTCCTACCACT",3,42.01,6.05,-4.72,0.97,1.5,1.19,0.01,">1 nonsynonymous","F17V N40Q F47I G116C",4
"lib1","SARS-CoV-2","GCAACGTGACACCACA",11,231.09,10.75,-0.01,0.07,2.91,1.07,0,"1 nonsynonymous","N40E",1
"lib1","SARS-CoV-2","GCAACTAAAACTGGCT",14,124.79,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A81L K87Q K94G G101V V173I R179V",6
"lib1","SARS-CoV-2","GCAACTAAGGGATTGG",3,13.81,7.86,-2.9,0.41,1.5,1,0.04,">1 nonsynonymous","C31R D90E W106L",3
"lib1","SARS-CoV-2","GCAACTAATAAAATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G74T D98L Y165E V182*",4
"lib1","SARS-CoV-2","GCAACTACCAATTTTG",8,116.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y91A V103L P177Q T201Y",4
"lib1","SARS-CoV-2","GCAACTACCTAACCTG",11,116.53,10.78,0.02,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACTACGCATATAG",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y50N T85S",3
"lib1","SARS-CoV-2","GCAACTAGAACAAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44L W106* A145Q",3
"lib1","SARS-CoV-2","GCAACTAGAGATTAAA",8,155.26,6,-4.76,0.41,1.5,1.1,0,">1 nonsynonymous","Y39T K48A P82D F99V",4
"lib1","SARS-CoV-2","GCAACTAGCCTAACGA",4,34.66,6.11,-4.65,0.84,1.5,1.19,0.02,">1 nonsynonymous","Y35T P149C P161T",3
"lib1","SARS-CoV-2","GCAACTAGGCACTCGT",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K I80F N130Y",3
"lib1","SARS-CoV-2","GCAACTATGATTCAGT",5,21.05,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","W106A G117N R136P V173T",4
"lib1","SARS-CoV-2","GCAACTATGGCCCTTA",4,40.94,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R124D Y143G",2
"lib1","SARS-CoV-2","GCAACTATGTTTAGAA",5,71.04,8.83,-1.94,0.23,1.5,1.06,0.02,">1 nonsynonymous","L57G T85A G152L",3
"lib1","SARS-CoV-2","GCAACTCAAATATAAA",1,26.64,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K94V I142S P169V",3
"lib1","SARS-CoV-2","GCAACTCAAGCGCAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L K87I D112K K128S D137N",5
"lib1","SARS-CoV-2","GCAACTCAATAGAAAT",11,9.91,7.15,-3.62,0.41,1.5,1.09,0.05,">1 nonsynonymous","A33M G86C P96Q Y121N V173W",5
"lib1","SARS-CoV-2","GCAACTCATTTACAAA",3,16.16,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","S43P G86V C102W C158L T170K V181G P197S",7
"lib1","SARS-CoV-2","GCAACTCTCTGCAGGA",9,110.6,6,-4.76,1.7,1.5,1.17,0.01,">1 nonsynonymous","G9Y E76S G152A Y165A",4
"lib1","SARS-CoV-2","GCAACTCTTAAAAACC",7,38.13,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","E76K K94S T100S",3
"lib1","SARS-CoV-2","GCAACTGCTAAATAAG",1,1.2,NA,NA,NA,NA,NA,NA,"stop","N4W S45Q N64R L131*",4
"lib1","SARS-CoV-2","GCAACTTAAAGAAAAA",4,30.26,10.61,-0.16,0.07,2.84,1.08,0,">1 nonsynonymous","T148Y G152R",2
"lib1","SARS-CoV-2","GCAACTTGGGGTTAAT",6,84.37,8.94,-1.83,0.07,2.51,1.09,0,">1 nonsynonymous","I2Q D98T I142R",3
"lib1","SARS-CoV-2","GCAACTTTCAGTTCGA",2,16.46,10.79,0.02,0.07,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACTTTGACTACGT",2,80.98,10.79,0.02,0.05,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAACTTTGGACTCGC",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139R T201D",2
"lib1","SARS-CoV-2","GCAACTTTGTCAAACA",8,75.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31M G83L Y119F T148L",4
"lib1","SARS-CoV-2","GCAAGAAAAACCCACA",4,193.74,9.49,-1.27,0.06,2.72,1.08,0,">1 nonsynonymous","Y39F Q176L",2
"lib1","SARS-CoV-2","GCAAGAAACAACAAGT",5,76.3,10.87,0.11,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAGAAACTTGGCTT",9,184.71,10.65,-0.11,0.05,2.9,1.05,0,">1 nonsynonymous","T46F T201S",2
"lib1","SARS-CoV-2","GCAAGAAAGATAAGTA",11,165.41,10.38,-0.38,0.03,2.9,1.03,0,">1 nonsynonymous","T100D L187S",2
"lib1","SARS-CoV-2","GCAAGAAATATCCCAG",2,14.32,9.86,-0.91,0.21,1.96,1,0.02,">1 nonsynonymous","C49S Q163A",2
"lib1","SARS-CoV-2","GCAAGAAATGAAAGTT",2,0.87,NA,NA,NA,NA,NA,NA,"stop","G9L T100C N107K L131W D137L N171*",6
"lib1","SARS-CoV-2","GCAAGAACCTTCAGGC",1,2.1,NA,NA,NA,NA,NA,NA,"stop","Y50M C61G D112Y Y119*",4
"lib1","SARS-CoV-2","GCAAGAACGAAACCAC",3,64.36,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A18H S113R N120C Y175H S184I",5
"lib1","SARS-CoV-2","GCAAGAACTGTGCAAG",6,2.11,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","GCAAGAAGACTCGAGT",6,78.61,6,-4.76,2,3,1.15,0,">1 nonsynonymous","I2F W23L G51F A89G N120A",5
"lib1","SARS-CoV-2","GCAAGAAGCAACTAAA",2,75.02,8.21,-2.55,0.23,1.6,1.12,0.02,">1 nonsynonymous","F12I T55I Q176L",3
"lib1","SARS-CoV-2","GCAAGAATACTGCATT",1,7.59,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G146L N151F",2
"lib1","SARS-CoV-2","GCAAGACACCCAATAA",1,10.87,8.15,-2.61,0.29,1.67,1.1,0.04,">1 nonsynonymous","A89C F126E V153N",3
"lib1","SARS-CoV-2","GCAAGACAGTTCAGTG",1,0.43,NA,NA,NA,NA,NA,NA,"stop","N58A I104W I138K G146* N157S",5
"lib1","SARS-CoV-2","GCAAGACCCTAAAACG",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A33L G101I A190V",4
"lib1","SARS-CoV-2","GCAAGACTATGCGCAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","I2S E10* K114G P133T P169A",5
"lib1","SARS-CoV-2","GCAAGACTTGCACGGT",9,101.08,10.5,-0.27,0.03,2.89,1.05,0,">1 nonsynonymous","N120D E135H",2
"lib1","SARS-CoV-2","GCAAGAGAAATACAGT",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D Y143S P191C T201R",4
"lib1","SARS-CoV-2","GCAAGAGAAATCATAA",1,33.57,10.71,-0.06,0.08,2.86,1.07,0,"1 nonsynonymous","T15S",1
"lib1","SARS-CoV-2","GCAAGAGACACGTTGC",10,78.05,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","GCAAGAGACGTGCGGC",1,0.39,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib1","SARS-CoV-2","GCAAGAGCCAACCAAC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","V20R A33P P96Y V103L E141Y V173* G196W",7
"lib1","SARS-CoV-2","GCAAGAGCTCTGATAT",3,44.29,10.73,-0.03,0.07,2.82,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAAGAGGCCCCGAAT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","L95* N120I",2
"lib1","SARS-CoV-2","GCAAGAGTTTCGACAA",4,50.65,10.81,0.05,0.09,2.91,1.05,0,">1 nonsynonymous","P54M T85Q",2
"lib1","SARS-CoV-2","GCAAGAGTTTGATTAT",7,112.91,10.58,-0.19,0.04,2.94,1,0,">1 nonsynonymous","F44L T55N",2
"lib1","SARS-CoV-2","GCAAGATAAATCCCAG",7,164.82,10.69,-0.07,0.05,2.95,1.03,0,">1 nonsynonymous","F8L E154G",2
"lib1","SARS-CoV-2","GCAAGATAAGGTTTTA",2,31.1,10.68,-0.08,0.06,2.83,1.14,0,"1 nonsynonymous","S36E",1
"lib1","SARS-CoV-2","GCAAGATAATAACCGC",3,51.92,10.81,0.05,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAGATAATCCACCT",8,67.48,10.9,0.14,0.07,2.87,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAAGATACGTACTCG",6,55.54,10.33,-0.43,0.04,2.96,1,0,">1 nonsynonymous","D98S Q144D",2
"lib1","SARS-CoV-2","GCAAGATACTCAAGGC",8,2.05,NA,NA,NA,NA,NA,NA,"stop","N1* W106F D137I",3
"lib1","SARS-CoV-2","GCAAGATGTAATCACT",6,0.36,NA,NA,NA,NA,NA,NA,"stop","V20L E141*",2
"lib1","SARS-CoV-2","GCAAGATTATATCCCG",4,64.73,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6Y K56I A67C R136A T201S",5
"lib1","SARS-CoV-2","GCAAGATTCTAAATCG",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q L60I L95I D98N A105G L122M Q176P",7
"lib1","SARS-CoV-2","GCAAGCAAATCTATGT",7,143.21,9.24,-1.52,0.1,1.88,1.1,0,">1 nonsynonymous","R27T Y39A K48R N110R R127L",5
"lib1","SARS-CoV-2","GCAAGCAACAATTAAA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G V37L Y91L W106S I138M",5
"lib1","SARS-CoV-2","GCAAGCAAGCTCTTAT",3,28.81,10.7,-0.07,0.07,2.93,1.04,0,"1 nonsynonymous","A67L",1
"lib1","SARS-CoV-2","GCAAGCACAATATCAT",7,121.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34N N40T F62A C150P",4
"lib1","SARS-CoV-2","GCAAGCACCAAAAACT",5,53.12,10.17,-0.59,0.08,2.79,1.07,0,">1 nonsynonymous","A81T N130H",2
"lib1","SARS-CoV-2","GCAAGCACTCAAAGAA",2,6.07,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","C49R V77L I88S",3
"lib1","SARS-CoV-2","GCAAGCATATAATGAT",2,40.77,10.16,-0.6,0.11,2.41,1,0,">1 nonsynonymous","A42V D90V",2
"lib1","SARS-CoV-2","GCAAGCCAGCCACTTT",2,38.79,9.8,-0.97,0.06,2.11,1.02,0,">1 nonsynonymous","K87S W106T N120E",3
"lib1","SARS-CoV-2","GCAAGCCCGAGAAATA",3,35.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12L Q84V P96C S108G D112E A190S",6
"lib1","SARS-CoV-2","GCAAGCCGAAGGAGGG",4,1.98,NA,NA,NA,NA,NA,NA,"stop","L5F S29* Q79L L183S",4
"lib1","SARS-CoV-2","GCAAGCCTCAGAGTAT",1,14.03,7.15,-3.62,0.54,1.5,1.32,0.06,"1 nonsynonymous","I104K",1
"lib1","SARS-CoV-2","GCAAGCGCAAACATGA",2,31.91,10.77,0.01,0.09,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAAGCGGCAAACTGG",6,105.07,10.69,-0.08,0.04,2.94,1.01,0,">1 nonsynonymous","G83C T100I E141K",3
"lib1","SARS-CoV-2","GCAAGCTATGAAGCAC",8,24.03,6.93,-3.83,0.28,1.5,1.16,0.02,">1 nonsynonymous","F8P A33C Q79M",3
"lib1","SARS-CoV-2","GCAAGGAGGATTTTTG",4,18.33,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F17S K26F I88G",3
"lib1","SARS-CoV-2","GCAAGGATAGTACGCC",2,1.01,NA,NA,NA,NA,NA,NA,"stop","Y91* V103M L125W C150G",4
"lib1","SARS-CoV-2","GCAAGGATTCCAACCG",1,9.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73V N92L",2
"lib1","SARS-CoV-2","GCAAGGCCAACAAAAT",1,35.5,9.75,-1.02,0.07,2.2,1.06,0,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","GCAAGGCGACAGCATG",2,43.33,8.65,-2.12,0.14,2.67,1.05,0.01,">1 nonsynonymous","S113L T201N",2
"lib1","SARS-CoV-2","GCAAGGGCCTAAGTTA",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D E141I T148A S184P",4
"lib1","SARS-CoV-2","GCAAGGTAAAGAATGG",6,68.94,10.7,-0.06,0.08,2.85,1.11,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","GCAAGGTATGATTCGC",1,9.54,10.27,-0.49,0.13,2.05,1,0.01,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","GCAAGGTGACTGCTCC",4,36.21,8.29,-2.47,0.26,1.5,1.04,0.03,">1 nonsynonymous","P54I D98L W106T",3
"lib1","SARS-CoV-2","GCAAGGTGTTTTCAGA",5,101.51,10.32,-0.44,0.07,2.85,1.03,0,">1 nonsynonymous","T3N L183F",2
"lib1","SARS-CoV-2","GCAAGGTTCCTACAAA",5,33.8,8.7,-2.06,0.2,1.63,1.22,0.02,">1 nonsynonymous","A14R A89Y",2
"lib1","SARS-CoV-2","GCAAGTAAAAAACCGA",15,159.69,9.7,-1.06,0.08,2.48,1.07,0,">1 nonsynonymous","Y35P A81R K87H A192L",4
"lib1","SARS-CoV-2","GCAAGTAAATAGTAGA",5,1.97,NA,NA,NA,NA,NA,NA,"stop","I2K R16M Y93S Y119* T148S",5
"lib1","SARS-CoV-2","GCAAGTAAATCAAACT",5,5.01,NA,NA,NA,NA,NA,NA,"stop","R16S V173*",2
"lib1","SARS-CoV-2","GCAAGTAAATGAAGCT",1,34.98,6.17,-4.59,0.46,1.5,1.14,0.01,">1 nonsynonymous","A145T S147Y L162K",3
"lib1","SARS-CoV-2","GCAAGTAACTGAGCCT",6,24.49,8.52,-2.25,0.36,1.5,1.06,0.06,">1 nonsynonymous","V182L L187S",2
"lib1","SARS-CoV-2","GCAAGTACAAATGAAC",3,19.91,8.62,-2.15,0.28,1.61,1.18,0.03,">1 nonsynonymous","F8C V37R T63R T170Y K198W",5
"lib1","SARS-CoV-2","GCAAGTACAACATTTA",2,0.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V115M",1
"lib1","SARS-CoV-2","GCAAGTAGAAGCATGT",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E N107A",2
"lib1","SARS-CoV-2","GCAAGTATACAAAAGT",2,0.07,NA,NA,NA,NA,NA,NA,"stop","G9W D97N F156*",3
"lib1","SARS-CoV-2","GCAAGTATACTTATTC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S G9Y T15H G86V",4
"lib1","SARS-CoV-2","GCAAGTCATAAACTGG",1,4.07,NA,NA,NA,NA,NA,NA,"stop","P7S S43T S53M V77* G116E",5
"lib1","SARS-CoV-2","GCAAGTCATTTTTTTG",5,8.26,6.16,-4.6,1,1.5,1.15,0.03,">1 nonsynonymous","T3P F44L L162R",3
"lib1","SARS-CoV-2","GCAAGTCCCCAAATTT",2,2.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139F",1
"lib1","SARS-CoV-2","GCAAGTCGGGAGGACA",14,240.76,10.47,-0.29,0.06,2.89,1.01,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","GCAAGTCTAAGATTTA",5,235.81,10.39,-0.37,0.03,2.93,1,0,">1 nonsynonymous","L5Y I104V G116T T201P",4
"lib1","SARS-CoV-2","GCAAGTCTACGATTTG",3,0.69,NA,NA,NA,NA,NA,NA,"stop","C6I V65R Y93* L122S P169V",5
"lib1","SARS-CoV-2","GCAAGTCTCTTAGACG",7,75.63,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T46C Y93L K132F",3
"lib1","SARS-CoV-2","GCAAGTCTGATAATAG",5,82.42,10.19,-0.57,0.06,2.84,1,0,">1 nonsynonymous","S45Y V115D K128S T201K",4
"lib1","SARS-CoV-2","GCAAGTCTGGTTACTC",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D N110H T201M",3
"lib1","SARS-CoV-2","GCAAGTGCTTAACAAA",1,18.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54F A105D G116L",3
"lib1","SARS-CoV-2","GCAAGTTATTCGAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","GCAAGTTCAGTAATTC",4,14.43,8.83,-1.93,0.3,1.87,1.25,0.05,">1 nonsynonymous","A14P E141C",2
"lib1","SARS-CoV-2","GCAAGTTCATAAATCG",9,50.26,8.91,-1.86,0.19,1.5,1.02,0.02,">1 nonsynonymous","L5V R16T F99Y A105V",4
"lib1","SARS-CoV-2","GCAAGTTTGTTTAAAA",7,78.21,9.97,-0.79,0.11,2.49,1.06,0,">1 nonsynonymous","A14F L125M",2
"lib1","SARS-CoV-2","GCAATAAAAAAATACA",1,2.35,NA,NA,NA,NA,NA,NA,"stop","T15I T55L Y159*",3
"lib1","SARS-CoV-2","GCAATAAAAAGTAAAT",9,85.33,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L38P I72K F160M",3
"lib1","SARS-CoV-2","GCAATAAAAATCTCTG",3,35.07,6,-4.76,1.18,3,1.17,0,">1 nonsynonymous","C49S Y123L",2
"lib1","SARS-CoV-2","GCAATAAAAATGTGGC",4,50.79,10.26,-0.5,0.04,2.83,1.04,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","GCAATAAACTGTGCCT",1,14.9,7.03,-3.74,0.35,1.5,1.2,0.03,">1 nonsynonymous","G9S L38G T46F A89V N110K K128P",6
"lib1","SARS-CoV-2","GCAATAAAGAAGCTGG",2,52.52,10.21,-0.56,0.07,2.79,1.05,0,">1 nonsynonymous","D59F P133G",2
"lib1","SARS-CoV-2","GCAATAAATCATTTGA",2,9.36,10.11,-0.65,0.12,2.93,1,0.01,">1 nonsynonymous","G9K V32M S36I C61Q",4
"lib1","SARS-CoV-2","GCAATAAATCCTTGAG",5,76.93,9.39,-1.37,0.06,2.82,1.11,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","GCAATAAATTTAAGCA",12,208.9,10.79,0.03,0.06,2.91,1.05,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","GCAATAACAACACACC",1,15.4,7.4,-3.36,0.61,1.5,1,0.06,">1 nonsynonymous","V11P K26R G51L",3
"lib1","SARS-CoV-2","GCAATAACAACGTCCG",2,76.04,8.51,-2.25,0.19,1.98,1.12,0.01,">1 nonsynonymous","T100V P149A Y175K",3
"lib1","SARS-CoV-2","GCAATAACATCAATGG",5,1,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","GCAATAACATCTGCGA",4,24.63,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V20H I80A",2
"lib1","SARS-CoV-2","GCAATAACCTTTCAGG",1,1.56,NA,NA,NA,NA,NA,NA,"stop","L5S F134D N151A F156L Q163*",5
"lib1","SARS-CoV-2","GCAATAACTGCTATCA",5,2.8,NA,NA,NA,NA,NA,NA,"stop","E10* T15S W106E",3
"lib1","SARS-CoV-2","GCAATAAGATTTGGGT",5,19.56,8.27,-2.49,0.27,1.5,1.13,0.04,">1 nonsynonymous","R16L D34V I142F Q168S",4
"lib1","SARS-CoV-2","GCAATAAGCCGTCATC",2,90.16,10.52,-0.25,0.06,2.8,1.04,0,">1 nonsynonymous","N1M F8I",2
"lib1","SARS-CoV-2","GCAATAAGCTGTAAGG",2,49.9,10.59,-0.18,0.08,2.86,1.11,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","GCAATAAGTCAAATAG",4,42.73,6,-4.76,1.7,1.5,1.28,0.04,">1 nonsynonymous","C6R A14P V32Q D59K D68Y N120S P197L",7
"lib1","SARS-CoV-2","GCAATAATATATCATC",2,38.57,8.24,-2.52,0.12,2.7,1.02,0.01,">1 nonsynonymous","N64Y K87S N157T",3
"lib1","SARS-CoV-2","GCAATAATCACCAACC",10,88.19,6.24,-4.52,0.67,1.5,1.17,0.02,">1 nonsynonymous","I2R N58W G86H",3
"lib1","SARS-CoV-2","GCAATAATCACCATTT",1,30.5,10.65,-0.12,0.11,2.8,1.18,0.01,"1 nonsynonymous","S43I",1
"lib1","SARS-CoV-2","GCAATAATGAGAAAGC",2,32.76,10.79,0.03,0.05,2.89,1.06,0,">1 nonsynonymous","I2W V32K T85R",3
"lib1","SARS-CoV-2","GCAATAATGATAGGAC",4,20.1,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","F17W S41F L111W F167V",4
"lib1","SARS-CoV-2","GCAATAATTATCAATA",1,63.2,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","G9E S45D I72G G86I D97V Y143A",6
"lib1","SARS-CoV-2","GCAATAATTGGAGGCC",2,32.41,10.79,0.03,0.06,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATACAAATATTTT",4,44.1,10.76,0,0.09,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATACACATTTCGG",8,169.64,9.56,-1.21,0.08,2.71,1.09,0,">1 nonsynonymous","L60Y T148I Y165H",3
"lib1","SARS-CoV-2","GCAATACAGCATACCT",2,7.15,6.67,-4.09,1.67,3,1.09,0.01,">1 nonsynonymous","A14L S69N P96Y C158S",4
"lib1","SARS-CoV-2","GCAATACATATGAAAG",2,29.89,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","C6L K87G L95Y Y143P P169H",5
"lib1","SARS-CoV-2","GCAATACATGGAATGT",2,12.02,9.26,-1.5,0.11,2.18,1.05,0.01,">1 nonsynonymous","F8W Y35S L60P N118E",4
"lib1","SARS-CoV-2","GCAATACCAATTTAAC",2,25.09,6,-4.76,2,3,1.17,0,"1 nonsynonymous","L95D",1
"lib1","SARS-CoV-2","GCAATACGCACATTCT",1,16.72,10.65,-0.12,0.1,2.79,1.13,0,">1 nonsynonymous","L122M Q163R",2
"lib1","SARS-CoV-2","GCAATACTAACAATCG",3,4.81,NA,NA,NA,NA,NA,NA,"stop","R25V S113*",2
"lib1","SARS-CoV-2","GCAATACTACCATGAC",4,26.07,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","N1W D137S Y175S",3
"lib1","SARS-CoV-2","GCAATACTCTTTTCCT",15,129.88,9.85,-0.91,0.09,2.1,1.08,0,"1 nonsynonymous","I28N",1
"lib1","SARS-CoV-2","GCAATACTGAGAGGAA",10,196.61,10.64,-0.13,0.04,2.9,1.02,0,">1 nonsynonymous","T100S N120Q",2
"lib1","SARS-CoV-2","GCAATACTTATGATGC",1,28.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L5H V37R L57C K94P P161L V182A",6
"lib1","SARS-CoV-2","GCAATACTTGTATGAT",4,63.52,9.57,-1.19,0.16,1.72,1.15,0.01,">1 nonsynonymous","F12G S139G",2
"lib1","SARS-CoV-2","GCAATAGAACTATGAA",4,72.42,10.69,-0.07,0.06,2.84,1.11,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","GCAATAGACGGGCAAC",1,78.04,10.18,-0.59,0.06,2.87,1,0,">1 nonsynonymous","N4L T55P",2
"lib1","SARS-CoV-2","GCAATAGCAAAAAGTC",1,1.94,NA,NA,NA,NA,NA,NA,"stop","A22T S36V F44* L122D G174Q T201*",6
"lib1","SARS-CoV-2","GCAATAGCTAACACTT",3,0,NA,NA,NA,NA,NA,NA,"stop","A14* E154M",2
"lib1","SARS-CoV-2","GCAATAGGAAAAGTTA",8,55.6,6.15,-4.62,1.38,1.5,1.3,0.04,">1 nonsynonymous","Y35R N64E Q84T S108M",4
"lib1","SARS-CoV-2","GCAATAGGTTATTAAG",5,0.43,NA,NA,NA,NA,NA,NA,"stop","G83I Y123S I142* T201K",4
"lib1","SARS-CoV-2","GCAATAGTCTCACCCG",1,72.13,10.73,-0.04,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATAGTTATAATGA",1,26.07,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","Y35N F44H D68E A89T D97L Y143A",6
"lib1","SARS-CoV-2","GCAATAGTTGTACACA",3,24.81,8.53,-2.23,0.19,1.5,1.15,0.01,">1 nonsynonymous","A81S D98C I142W",3
"lib1","SARS-CoV-2","GCAATATAACTCCGAT",1,32.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N Y119F F134M E141S",4
"lib1","SARS-CoV-2","GCAATATAATATTTAA",1,6.57,6,-4.76,2,1.5,1.07,0.05,">1 nonsynonymous","D59W N64G G117F Y121T",4
"lib1","SARS-CoV-2","GCAATATATATAACAT",1,19.28,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","F44G P96A Y178P",3
"lib1","SARS-CoV-2","GCAATATATTAAGACC",2,74.08,7.61,-3.16,0.3,1.52,1.18,0.03,">1 nonsynonymous","S139L A145E P169N K198H",4
"lib1","SARS-CoV-2","GCAATATCGTAAGTAG",3,59.11,10.59,-0.18,0.08,2.87,1.05,0,">1 nonsynonymous","P54R G152T",2
"lib1","SARS-CoV-2","GCAATATCTACCATTG",8,175.04,10.61,-0.16,0.05,2.9,1.03,0,">1 nonsynonymous","Q84M D98F",2
"lib1","SARS-CoV-2","GCAATATCTTGATTAT",3,78.33,9.74,-1.03,0.12,2.02,1.07,0.01,">1 nonsynonymous","D90I T100L K128V",3
"lib1","SARS-CoV-2","GCAATATGGACTTTAA",6,22.04,6,-4.76,0.95,1.5,1.17,0.01,">1 nonsynonymous","G86Y T148P",2
"lib1","SARS-CoV-2","GCAATATTAATGAATC",2,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D98N P149Y",3
"lib1","SARS-CoV-2","GCAATATTAGATTCGT",2,163.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44P D59L F99C P177S",4
"lib1","SARS-CoV-2","GCAATCAAAATTGTTA",7,5.77,NA,NA,NA,NA,NA,NA,"stop","Y35R Y91* P149L Y159E V173Y",5
"lib1","SARS-CoV-2","GCAATCACGTTACCCT",8,52.67,8.47,-2.29,0.11,1.7,1.11,0.01,">1 nonsynonymous","A14V D90N N118Y Q163S",4
"lib1","SARS-CoV-2","GCAATCCAAAGCAAAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","I2V A81T A105D N130S V153S G166Y Q176*",7
"lib1","SARS-CoV-2","GCAATCCAAAGGTTTT",13,178.27,10.74,-0.03,0.03,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATCCAACACGAAA",4,42.53,6.03,-4.74,1.09,1.5,1.24,0.02,">1 nonsynonymous","T63N K94G G146E",3
"lib1","SARS-CoV-2","GCAATCCAGCAACCCT",4,21.59,10.8,0.03,0.09,2.93,1.04,0,">1 nonsynonymous","R27S D98N T201M",3
"lib1","SARS-CoV-2","GCAATCCCAGATGAGT",6,204.11,10.08,-0.69,0.07,2.65,1.04,0,">1 nonsynonymous","N1E D34R K114Q",3
"lib1","SARS-CoV-2","GCAATCCCTAGGAATA",4,10.22,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","G51K V77W V173G",3
"lib1","SARS-CoV-2","GCAATCCCTGCTTGAA",2,7.63,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","G9M L95F N130S P161H",4
"lib1","SARS-CoV-2","GCAATCCGAGCTAAAG",2,24.64,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D90I D98V Q144T G155M Y178H",5
"lib1","SARS-CoV-2","GCAATCCGTAATCACA",5,42.54,8.81,-1.95,0.27,1.5,1,0.04,">1 nonsynonymous","N4R I28E K94A",3
"lib1","SARS-CoV-2","GCAATCGTTTGTATGG",4,164.61,8.21,-2.56,0.16,1.9,1.11,0.01,">1 nonsynonymous","F44N G83E F160A G174H",4
"lib1","SARS-CoV-2","GCAATCTAATATAGCT",5,32.87,6.2,-4.57,1.21,1.5,1.15,0.04,">1 nonsynonymous","K48A G51V P54F R78L Y91A F126V S139P G152S P197A",9
"lib1","SARS-CoV-2","GCAATCTAGTCCAAAT",2,20.32,6.85,-3.91,0.52,1.79,1.09,0.03,">1 nonsynonymous","V52H V103R Y165C",3
"lib1","SARS-CoV-2","GCAATCTCAAGCGCTA",3,43.93,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","K48Y T55S A89G Q176K",4
"lib1","SARS-CoV-2","GCAATCTTAATTTTGT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","P7* A14M Y50V G101R N120T",5
"lib1","SARS-CoV-2","GCAATCTTCGCTAGAT",13,65.41,10.84,0.08,0.07,2.79,1.14,0,"1 nonsynonymous","N151K",1
"lib1","SARS-CoV-2","GCAATCTTCTAAAAAT",10,11.7,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L131T V182D",2
"lib1","SARS-CoV-2","GCAATGAAAATAGGAC",2,68.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K48M F126L P133T T140H Y175L G196D",6
"lib1","SARS-CoV-2","GCAATGAACGGTATTG",10,130.66,6.33,-4.43,0.41,1.5,1.2,0.01,">1 nonsynonymous","N4S Y21R N130G",3
"lib1","SARS-CoV-2","GCAATGACGGCGATAA",2,36.35,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","G9W R136Q C158V G174T",4
"lib1","SARS-CoV-2","GCAATGACTTCGAATA",3,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D A89L F160D",3
"lib1","SARS-CoV-2","GCAATGAGTAGGTTAC",6,95.84,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12Q T63S G155T P177M A190T",5
"lib1","SARS-CoV-2","GCAATGATAAGGAATA",12,98.33,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L38K P54Q L60T S139E L162S",5
"lib1","SARS-CoV-2","GCAATGATTACTAATA",1,7.59,10.55,-0.21,0.12,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATGCCCAATCCTG",2,57.3,6,-4.76,1.46,1.5,1.15,0,">1 nonsynonymous","D97A S113E N120D G152S",4
"lib1","SARS-CoV-2","GCAATGCGCGGAGCCA",1,9.69,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","D90P G155V",2
"lib1","SARS-CoV-2","GCAATGGACCAATGCG",9,75.85,9.04,-1.73,0.12,1.71,1.12,0.01,">1 nonsynonymous","Y66G G174M",2
"lib1","SARS-CoV-2","GCAATGGATGCTAATC",4,48.58,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","V71R",1
"lib1","SARS-CoV-2","GCAATGGCCTTATAAT",3,50.39,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G9K R27L V37N C49V Y178D",5
"lib1","SARS-CoV-2","GCAATGGCTGCGATAA",4,25.7,7.88,-2.89,0.37,1.5,1.07,0.05,">1 nonsynonymous","D90Y S139L T170G",3
"lib1","SARS-CoV-2","GCAATGGGTACGCGTT",2,40.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R124Y R136Y",2
"lib1","SARS-CoV-2","GCAATGTAAATTCTAA",7,43.59,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","Y91L D97Y G146Y G166L",4
"lib1","SARS-CoV-2","GCAATGTCAACAAATG",2,19.31,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","E76G Y121C T170L",3
"lib1","SARS-CoV-2","GCAATGTCGATCATAG",1,19.41,8.21,-2.56,0.26,1.5,1.04,0.02,">1 nonsynonymous","C6Y F47Y E141F",3
"lib1","SARS-CoV-2","GCAATGTGCCCAATAG",3,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G L125C V173P",3
"lib1","SARS-CoV-2","GCAATGTTAACATTAT",3,134.32,10.66,-0.1,0.06,2.89,1.07,0,">1 nonsynonymous","V77L T140S",2
"lib1","SARS-CoV-2","GCAATTAAAGGCTAAT",4,58.04,10.81,0.05,0.06,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATTAAATGTTAGT",5,142.87,9.89,-0.88,0.06,2.76,1.07,0,">1 nonsynonymous","E10K A14K G174Q K199R",4
"lib1","SARS-CoV-2","GCAATTAATATATAAT",2,10.11,6,-4.76,2,3,1.06,0,">1 nonsynonymous","D97R P149V E154Y L162G",4
"lib1","SARS-CoV-2","GCAATTAATATTTCAA",2,1.58,NA,NA,NA,NA,NA,NA,"stop","S45* L60I H189P",3
"lib1","SARS-CoV-2","GCAATTACCACAGGAA",1,16.65,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K56N F99E Y121H",3
"lib1","SARS-CoV-2","GCAATTATAACCTGCT",2,46,9.44,-1.33,0.16,2.3,1.12,0.01,">1 nonsynonymous","F167L V173L",2
"lib1","SARS-CoV-2","GCAATTATCAGGATTA",1,64.94,10.8,0.03,0.05,2.96,1.03,0,"1 nonsynonymous","K56Q",1
"lib1","SARS-CoV-2","GCAATTATTAGAATTC",2,9.39,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","P96M W106K L162S",3
"lib1","SARS-CoV-2","GCAATTATTATGCCCT",1,23.89,9.8,-0.97,0.1,2.74,1.03,0.01,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","GCAATTCAAAATGAAA",4,1.15,NA,NA,NA,NA,NA,NA,"stop","N4L A14L S113* L125Y",4
"lib1","SARS-CoV-2","GCAATTCAATCCTAAG",1,11.49,7.87,-2.9,0.46,1.5,1.03,0.08,">1 nonsynonymous","Y91L N107T S139A",3
"lib1","SARS-CoV-2","GCAATTCACTCGTTTT",5,30.19,NA,NA,NA,NA,NA,NA,"stop","C49G T55A I88D D112* T201K",5
"lib1","SARS-CoV-2","GCAATTCATGGCTAAA",5,45.28,6.44,-4.32,0.18,1.82,1.13,0,">1 nonsynonymous","I28M I138D C158R",3
"lib1","SARS-CoV-2","GCAATTCCCCATACAT",2,17.89,6.27,-4.49,0.59,1.5,1.15,0.01,">1 nonsynonymous","R27T V37M N64A D98L G146S L183R",6
"lib1","SARS-CoV-2","GCAATTCCCTATCACA",1,31.43,10.07,-0.7,0.12,2.62,1,0.01,">1 nonsynonymous","N107A G152D",2
"lib1","SARS-CoV-2","GCAATTCCGATTAAAA",4,10.08,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","F99H D137F T170Q",3
"lib1","SARS-CoV-2","GCAATTCGATCACATC",19,124.51,6,-4.76,1.97,1.5,1.13,0.01,">1 nonsynonymous","C6M S113Y E141S",3
"lib1","SARS-CoV-2","GCAATTCGGATGACAT",14,180.23,10.71,-0.05,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATTCGTCAACAAG",6,44.31,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y50D F99G",2
"lib1","SARS-CoV-2","GCAATTCTGGCATTAC",3,167.9,6.28,-4.49,0.9,1.5,1.34,0.04,">1 nonsynonymous","T3A C158G",2
"lib1","SARS-CoV-2","GCAATTCTGTCTAAAA",4,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I K87T V181M L183T",4
"lib1","SARS-CoV-2","GCAATTGAAAATATAT",6,0.3,NA,NA,NA,NA,NA,NA,"stop","S36K T100Q Q163T S184*",4
"lib1","SARS-CoV-2","GCAATTGAATCGTTGA",7,15.58,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","C49A L60R L125G S139D C158G",5
"lib1","SARS-CoV-2","GCAATTGATAAATGAG",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y R73Q I88T D98R L131A",5
"lib1","SARS-CoV-2","GCAATTGCATAAATGG",3,22.46,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","Y21S L60R R124N L131R",4
"lib1","SARS-CoV-2","GCAATTGCGGGGTCAT",2,51.18,10.77,0,0.08,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAATTGCTGATGGTA",4,27.17,9.17,-1.6,0.08,2.91,1.08,0,">1 nonsynonymous","R16S V32L Y119G",3
"lib1","SARS-CoV-2","GCAATTGGCATAAAAA",2,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F Y121Q F156L",3
"lib1","SARS-CoV-2","GCAATTGGCGGTATCT",5,141.4,10.62,-0.15,0.04,2.89,1.04,0,">1 nonsynonymous","N4E S53M L60R",3
"lib1","SARS-CoV-2","GCAATTGGTGTCCCAC",13,17.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58K K94R V103Y G116L V173F F185S",6
"lib1","SARS-CoV-2","GCAATTGTTATAAATT",2,63.33,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","V20D",1
"lib1","SARS-CoV-2","GCAATTGTTGCGAGGA",1,14.24,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","K26S L38F V103A E141I",4
"lib1","SARS-CoV-2","GCAATTTAACATTAGT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","S45R Y91V D98I S200*",4
"lib1","SARS-CoV-2","GCAATTTAAGGTTAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","G51S N58* D90C F99V",4
"lib1","SARS-CoV-2","GCAATTTAAGTCGGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","F8Y C49A Y93* S139N Q163Y",5
"lib1","SARS-CoV-2","GCAATTTAGCAAACAT",3,5.77,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5N N13V S19K D59V D137Y L183R",6
"lib1","SARS-CoV-2","GCAATTTAGGAGTTTA",8,177.26,10.31,-0.46,0.04,2.91,1.01,0,">1 nonsynonymous","F44L D97R",2
"lib1","SARS-CoV-2","GCAATTTGCCTTCTGC",7,5.37,NA,NA,NA,NA,NA,NA,"stop","N24L F62Y K87* K114M",4
"lib1","SARS-CoV-2","GCAATTTTATCCTCAT",4,18.34,7.08,-3.69,0.37,1.5,1.08,0.04,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GCAATTTTGTGAATCA",1,23.06,9.33,-1.43,0.17,1.81,1.17,0.01,">1 nonsynonymous","L5K N40L Q79A",3
"lib1","SARS-CoV-2","GCAATTTTGTTACTGC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","C31L K87L L95N R136* G166F",5
"lib1","SARS-CoV-2","GCAATTTTTAGGAGGA",3,1.91,NA,NA,NA,NA,NA,NA,"stop","N40* G155N P177N",3
"lib1","SARS-CoV-2","GCAATTTTTCAGCCGT",1,18.51,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","C6Y F44G T100P",3
"lib1","SARS-CoV-2","GCACAAAAACATTGAG",3,50.76,8.58,-2.19,0.13,2.57,1.12,0.01,">1 nonsynonymous","N40A C61R D98M G166K",4
"lib1","SARS-CoV-2","GCACAAAAAGGAACAT",2,18.17,8.92,-1.84,0.25,1.5,1.02,0.05,">1 nonsynonymous","N4M F99I",2
"lib1","SARS-CoV-2","GCACAAAAAGTTAAAA",1,15.67,8.13,-2.63,0.29,1.62,1.09,0.01,">1 nonsynonymous","R127S R136S N151K",3
"lib1","SARS-CoV-2","GCACAAAAATTATCAA",1,35.05,10.58,-0.19,0.05,2.91,1.04,0,"1 nonsynonymous","Y66D",1
"lib1","SARS-CoV-2","GCACAAAACCCATAAG",2,5.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161W",1
"lib1","SARS-CoV-2","GCACAAAATATATTAG",5,62.28,10.47,-0.29,0.05,2.91,1.06,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","GCACAAAATGCAGACT",3,27.04,6.56,-4.21,0.8,1.5,1.14,0.06,">1 nonsynonymous","S41W D112S G166P",3
"lib1","SARS-CoV-2","GCACAAAATTAGACCT",7,122.21,10.41,-0.35,0.04,2.93,1.02,0,">1 nonsynonymous","T3Y E135G Q168R",3
"lib1","SARS-CoV-2","GCACAAACGATAAAAA",1,34.15,8.92,-1.84,0.1,2.77,1.23,0,">1 nonsynonymous","N64T K114G F156Y",3
"lib1","SARS-CoV-2","GCACAAACGTCCATCG",9,119.28,10.72,-0.05,0.07,2.87,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GCACAAACTTTCTGTT",5,44.92,9.73,-1.03,0.06,2.94,1.01,0,">1 nonsynonymous","I142R A190G",2
"lib1","SARS-CoV-2","GCACAAAGACACCGCA",6,172.96,10.3,-0.47,0.05,2.68,1.04,0,">1 nonsynonymous","I2V D75R D98A S164T",4
"lib1","SARS-CoV-2","GCACAAAGACATTGCT",4,26.73,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37G Q79P T201L",3
"lib1","SARS-CoV-2","GCACAAAGCCGTTGAT",3,64.86,9.01,-1.76,0.15,1.76,1.12,0.01,">1 nonsynonymous","V11G S43H D97R",3
"lib1","SARS-CoV-2","GCACAAATACAGCTAC",1,18.73,10.7,-0.06,0.1,2.74,1.22,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCACAAATTTTGTAGG",3,58.01,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K48R G83N T85M F99S L122R I142T",6
"lib1","SARS-CoV-2","GCACAACAATCCTCAT",5,40.36,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86S D112K",2
"lib1","SARS-CoV-2","GCACAACAATTTATAG",5,39.74,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A14S R16S G146E P161Y",4
"lib1","SARS-CoV-2","GCACAACCCCCTGGCT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T Y93T",2
"lib1","SARS-CoV-2","GCACAACCGATTTTTA",5,79.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K26S A67H G86T L122N R127C E141R N151R Q176H",8
"lib1","SARS-CoV-2","GCACAACTAACGAATA",2,47.85,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Q84I C158H T201S",3
"lib1","SARS-CoV-2","GCACAACTGTAAGACA",1,21,10.86,0.09,0.07,3,1,0,"1 nonsynonymous","S43D",1
"lib1","SARS-CoV-2","GCACAACTTTATACAT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","F12V R73P K114* Q144S",4
"lib1","SARS-CoV-2","GCACAAGACACCTATC",3,83.77,10.77,0.01,0.07,2.91,1.08,0,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","GCACAAGCAGCAATAA",1,23.9,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","D98L V103P P133T E141V G152L G166L",6
"lib1","SARS-CoV-2","GCACAAGCGAACCGCT",1,12.37,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","D34E L95C T170E",3
"lib1","SARS-CoV-2","GCACAAGCTCATCTGT",4,2.4,NA,NA,NA,NA,NA,NA,"stop","I2K S41P K87D D98N C102* I104G",6
"lib1","SARS-CoV-2","GCACAAGGAACAAACC",4,46.48,10.74,-0.03,0.04,2.92,1.07,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","GCACAAGGAGTAAAAG",3,48.33,6.53,-4.23,0.78,1.5,1.22,0.05,">1 nonsynonymous","S19V D34C",2
"lib1","SARS-CoV-2","GCACAAGGGATTACAA",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L D68Q T100D I104R R136G",5
"lib1","SARS-CoV-2","GCACAAGTGTACTTAG",1,36.28,10.28,-0.49,0.06,2.92,1,0,">1 nonsynonymous","L60S I104M F160C",3
"lib1","SARS-CoV-2","GCACAATAAAAGCAAA",5,39.22,9.75,-1.01,0.1,1.97,1.04,0.01,">1 nonsynonymous","A14L Y91L T140N",3
"lib1","SARS-CoV-2","GCACAATAACCATACC",11,125.52,10.22,-0.54,0.04,2.89,1.03,0,">1 nonsynonymous","R78H K87G",2
"lib1","SARS-CoV-2","GCACAATAACCGAATT",1,26.57,9.28,-1.48,0.09,2.72,1.05,0,"1 nonsynonymous","N118I",1
"lib1","SARS-CoV-2","GCACAATATAAGTTGG",5,79.19,10.6,-0.16,0.03,2.96,1.03,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","GCACAATTAAGTTAAT",6,176.16,10.68,-0.08,0.03,2.92,1.04,0,">1 nonsynonymous","L5W D98R N110S L122H",4
"lib1","SARS-CoV-2","GCACAATTCCCCTGAC",2,60.57,8.39,-2.38,0.12,2.23,1.16,0,">1 nonsynonymous","S41A F134D G166T",3
"lib1","SARS-CoV-2","GCACACAAATAGCAGG",1,11.54,10.07,-0.7,0.08,3,1.01,0,">1 nonsynonymous","K87L R127K S200Q",3
"lib1","SARS-CoV-2","GCACACAACCATATTC",3,41.55,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D59V W106N S139D",3
"lib1","SARS-CoV-2","GCACACAACGAAGACG",7,154.85,10.2,-0.56,0.08,2.41,1.01,0,"1 nonsynonymous","V52G",1
"lib1","SARS-CoV-2","GCACACAAGTTCGAGT",5,22.11,10.76,-0.01,0.07,2.89,1.07,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","GCACACAATCTAGCAT",1,46.86,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S41W P177T",2
"lib1","SARS-CoV-2","GCACACAGGGAGTTGT",4,81.95,6,-4.76,1.58,1.5,1.14,0.01,">1 nonsynonymous","I28T P161T Y175A S200E",4
"lib1","SARS-CoV-2","GCACACAGTCCCTAAA",4,70.09,10.62,-0.15,0.05,2.89,1.08,0,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","GCACACAGTCTTTCTG",2,18.76,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I2E A14L S19E F44Y G116L S139Y E154G F160V P197L T201Q",10
"lib1","SARS-CoV-2","GCACACATCCTTACGC",1,12.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L I28L G155L",3
"lib1","SARS-CoV-2","GCACACATTATATTTT",3,33.28,9.67,-1.09,0.14,2.42,1.05,0.01,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","GCACACATTTCACCCA",2,17.85,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","T3S L5P V20R R27Q T55P K94E F156N P169H",8
"lib1","SARS-CoV-2","GCACACCAAAAGAATA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T55H V103L G146H N151*",4
"lib1","SARS-CoV-2","GCACACCAAATATACC",5,60.51,10.84,0.07,0.08,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACACCAACCGTACT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","F8W V37W W106V N151*",4
"lib1","SARS-CoV-2","GCACACCATATCTCTT",1,0.4,NA,NA,NA,NA,NA,NA,"stop","T100* Y119F",2
"lib1","SARS-CoV-2","GCACACCCGGGGTCTT",4,16.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N92K I142L",2
"lib1","SARS-CoV-2","GCACACCGGCGTATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y T100L N109R Y123V S129I T140A",6
"lib1","SARS-CoV-2","GCACACGAAATCCAAG",4,69.27,10.16,-0.6,0.08,2.83,1.1,0,">1 nonsynonymous","C6V K199I",2
"lib1","SARS-CoV-2","GCACACGAGGCGGTTG",3,71.37,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5K V37N N109P S113P P177H",5
"lib1","SARS-CoV-2","GCACACGATTCTATCG",2,36.8,10.8,0.03,0.1,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GCACACGCCCCCAATA",6,237.9,10.65,-0.11,0.05,2.92,1.05,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","GCACACGCCTCGGCGG",5,12.53,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N92T G152L",2
"lib1","SARS-CoV-2","GCACACGCGGACAGCT",2,35.29,8.51,-2.25,0.19,1.6,1.15,0.01,">1 nonsynonymous","W106V L131M F156I",3
"lib1","SARS-CoV-2","GCACACGCGTTCGTTC",3,6.04,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","S41H W106E Y123A G155S",4
"lib1","SARS-CoV-2","GCACACGTACATGAAC",3,51.86,10.79,0.02,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACACTAAAGAGAAG",2,16.73,10.45,-0.31,0.09,2.96,1.01,0,">1 nonsynonymous","R27K D98L",2
"lib1","SARS-CoV-2","GCACACTTCGAATACA",8,98.64,9.37,-1.39,0.33,1.5,1,0.06,">1 nonsynonymous","V71G S129N",2
"lib1","SARS-CoV-2","GCACACTTGCCAATCG",16,336.44,10.78,0.02,0.05,2.9,1.05,0,">1 nonsynonymous","N64A D90N V173H",3
"lib1","SARS-CoV-2","GCACAGAAACAACGGG",9,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T D137P",2
"lib1","SARS-CoV-2","GCACAGAAAGGAAAAT",3,35.14,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y93T K128N P149D",3
"lib1","SARS-CoV-2","GCACAGAATAAATAAA",3,749.66,10.7,-0.07,0.04,2.93,1.04,0,"1 nonsynonymous","Q84R",1
"lib1","SARS-CoV-2","GCACAGACAATAACTC",5,60.72,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I88M F99M T170R Q176M",4
"lib1","SARS-CoV-2","GCACAGACGTTCTCAA",8,79.3,10.66,-0.1,0.1,2.92,1.06,0,">1 nonsynonymous","T46L K128H",2
"lib1","SARS-CoV-2","GCACAGACTCCCTCTA",2,32.15,10,-0.76,0.13,2.67,1.06,0.01,">1 nonsynonymous","C31G K199Y",2
"lib1","SARS-CoV-2","GCACAGATGAGGAAAT",7,34.99,6.24,-4.53,1.03,1.5,1.17,0.05,">1 nonsynonymous","S43T I104H N120K P133T Q168G",5
"lib1","SARS-CoV-2","GCACAGATGTTGTAAA",9,14.6,NA,NA,NA,NA,NA,NA,"stop","K26N C49* G86R",3
"lib1","SARS-CoV-2","GCACAGCGGCTTCACT",4,208.26,9.91,-0.85,0.07,2.12,1.03,0,"1 nonsynonymous","V11E",1
"lib1","SARS-CoV-2","GCACAGGAACGTTTGG",6,56.86,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64Q F167Q F185C",3
"lib1","SARS-CoV-2","GCACAGGATGAGAAAA",2,8.79,6,-4.76,2,1.5,1.24,0.06,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","GCACAGGGAATGTGTG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","F17P A18T W106L F134*",4
"lib1","SARS-CoV-2","GCACAGGTATAATTAG",9,147.06,10.36,-0.4,0.04,2.88,1.03,0,">1 nonsynonymous","F44S E154A",2
"lib1","SARS-CoV-2","GCACAGTAGCCAGTCA",14,109.25,6,-4.76,2,3,1.19,0,">1 nonsynonymous","D112S R136G",2
"lib1","SARS-CoV-2","GCACAGTCACTGTGAA",5,32.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49N Y178S",2
"lib1","SARS-CoV-2","GCACAGTTAAAGTAGT",2,9.12,6,-4.76,0.82,3,1.1,0.01,">1 nonsynonymous","I2L Y93T I104T V182I",4
"lib1","SARS-CoV-2","GCACAGTTAAGCGATG",8,99.73,10.72,-0.04,0.07,2.85,1.09,0,">1 nonsynonymous","I2M T201R",2
"lib1","SARS-CoV-2","GCACAGTTCCAGGACT",5,18.03,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","A42S C158W R179N",3
"lib1","SARS-CoV-2","GCACATAAAAAGTCGT",1,6.95,10.85,0.09,0.11,2.91,1,0.01,"1 nonsynonymous","D75F",1
"lib1","SARS-CoV-2","GCACATAAAAGTCCAA",1,42.76,10.73,-0.04,0.05,2.96,1.03,0,"1 nonsynonymous","N4G",1
"lib1","SARS-CoV-2","GCACATACCTACCCAA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74Y W106K",2
"lib1","SARS-CoV-2","GCACATACGGTCCCGT",1,23.99,9.97,-0.79,0.14,2.14,1.03,0.01,">1 nonsynonymous","R78T Y91C S129V G155R Q163V",5
"lib1","SARS-CoV-2","GCACATACGTCAAATA",10,71.14,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","F99S F134K P149H T201L",4
"lib1","SARS-CoV-2","GCACATATAACGAACC",6,36.34,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","G83I D112R Y119V",3
"lib1","SARS-CoV-2","GCACATATCGATGATA",5,31.01,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F70I A81T G86S T140D G172A K199V",6
"lib1","SARS-CoV-2","GCACATCACTTGAGGG",5,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S S108L I138G G172M",4
"lib1","SARS-CoV-2","GCACATCGGCCAAACT",6,2.25,NA,NA,NA,NA,NA,NA,"stop","A42* I88C N118T G152F",4
"lib1","SARS-CoV-2","GCACATCGTATCACTG",3,47.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A33R C49L F160N",3
"lib1","SARS-CoV-2","GCACATCTGCCATACG",7,109.5,8.83,-1.94,0.07,2.86,1.11,0,">1 nonsynonymous","F126R P149S",2
"lib1","SARS-CoV-2","GCACATCTTACGCGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S K87D F99E",3
"lib1","SARS-CoV-2","GCACATCTTGCCGCTT",3,10.45,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A22V N40T C49E C61M P149Q",5
"lib1","SARS-CoV-2","GCACATGAAATTTTTG",6,86.61,10.38,-0.39,0.05,2.88,1.05,0,"1 nonsynonymous","G9C",1
"lib1","SARS-CoV-2","GCACATGAGAGCATAT",2,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W D90C R124S V173P",4
"lib1","SARS-CoV-2","GCACATGCACTAGCCG",12,130.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11Y V37C K56M E76S E135V",5
"lib1","SARS-CoV-2","GCACATGTGATGAAAA",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102I S129T S200R",3
"lib1","SARS-CoV-2","GCACATTAGAACTCGG",4,16.41,10.16,-0.61,0.1,2.81,1,0.01,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","GCACATTAGTAACCAA",3,2.42,NA,NA,NA,NA,NA,NA,"stop","N64Y W106F I142V Y159*",4
"lib1","SARS-CoV-2","GCACATTCAAGTACAA",6,1.21,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","GCACATTCGAAGCCAT",2,13.75,8.19,-2.58,0.26,1.52,1.29,0.04,">1 nonsynonymous","T55M N107S G155V P197Q",4
"lib1","SARS-CoV-2","GCACATTGAATTACGT",2,11.93,6,-4.76,2,1.5,1.05,0.05,">1 nonsynonymous","F47Y F99R L187R",3
"lib1","SARS-CoV-2","GCACATTGATGACCAC",4,24.5,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A22I A81L S200P",3
"lib1","SARS-CoV-2","GCACATTGATGCCAAC",2,19.19,8.91,-1.85,0.21,1.71,1.15,0.02,">1 nonsynonymous","A89Y N120Y",2
"lib1","SARS-CoV-2","GCACATTGCTAACCTA",3,3.02,NA,NA,NA,NA,NA,NA,"stop","A89M W106* R179Q",3
"lib1","SARS-CoV-2","GCACATTTCCTTATCA",3,6.73,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","N1L Y93T",2
"lib1","SARS-CoV-2","GCACATTTGCATGTAA",1,9.6,7.45,-3.31,0.47,1.5,1.02,0.06,">1 nonsynonymous","S36W S41A K87I K94P",4
"lib1","SARS-CoV-2","GCACATTTTGCAAAAA",2,27.24,10.56,-0.2,0.11,2.79,1.09,0.01,">1 nonsynonymous","K132G T148S",2
"lib1","SARS-CoV-2","GCACCAACCAACCCAA",4,58.96,10.65,-0.11,0.08,2.87,1.1,0,">1 nonsynonymous","C61R I104F",2
"lib1","SARS-CoV-2","GCACCAACCGGCGTGA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","N109C E135R E141* N151I",4
"lib1","SARS-CoV-2","GCACCAAGAAATTGTA",5,66.24,9.17,-1.59,0.1,2.55,1.16,0,"1 nonsynonymous","G146M",1
"lib1","SARS-CoV-2","GCACCAATACGCGCAG",4,27.38,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","E10D K26L Y50S K128I C150E",5
"lib1","SARS-CoV-2","GCACCAATACTACAAC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","P7* D137I",2
"lib1","SARS-CoV-2","GCACCAATATAGACAT",6,28.38,9.61,-1.16,0.16,1.67,1.05,0.01,">1 nonsynonymous","V71L S139L K199Q",3
"lib1","SARS-CoV-2","GCACCACAACATAACA",5,50.97,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","E10V A18R V65G D97I A105F",5
"lib1","SARS-CoV-2","GCACCACCAATCTACT",1,82.55,8.62,-2.14,0.16,1.5,1.04,0.01,">1 nonsynonymous","Y93I I138L",2
"lib1","SARS-CoV-2","GCACCACCATAAGGTC",1,44.97,10.49,-0.27,0.06,2.9,1,0,">1 nonsynonymous","D98A E141R",2
"lib1","SARS-CoV-2","GCACCACCTACAAACA",1,665.77,6,-4.76,1.46,1.5,1.14,0,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","GCACCACGAACGCAGT",1,42.24,10.35,-0.42,0.05,2.95,1,0,">1 nonsynonymous","G9T N109I",2
"lib1","SARS-CoV-2","GCACCACGCGCGGATT",12,40.38,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12I N40Y G83F L95P W106K",5
"lib1","SARS-CoV-2","GCACCAGACAGAGCAG",2,42.12,10.75,-0.01,0.06,2.87,1.05,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","GCACCAGACATTGATA",2,61.88,9.47,-1.29,0.31,1.5,1,0.04,">1 nonsynonymous","S45H L95Q",2
"lib1","SARS-CoV-2","GCACCAGACCACAATC",10,79.66,10.35,-0.42,0.06,2.79,1.03,0,">1 nonsynonymous","N1E F62G L122W",3
"lib1","SARS-CoV-2","GCACCAGATAATGTCA",8,0.47,NA,NA,NA,NA,NA,NA,"stop","V77L A105* R124F K198I",4
"lib1","SARS-CoV-2","GCACCAGATCTGTCAC",4,47.02,6.18,-4.58,0.99,1.5,1.15,0.03,">1 nonsynonymous","N4R N92T F126I",3
"lib1","SARS-CoV-2","GCACCAGCGAGACACA",1,8.15,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8P D59N F167S G174R",4
"lib1","SARS-CoV-2","GCACCAGTGAATAAAT",5,65.7,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N30E N40D C102Q",3
"lib1","SARS-CoV-2","GCACCAGTTGGAAGTG",9,101.67,10.72,-0.05,0.05,2.9,1.08,0,">1 nonsynonymous","N120L K198N",2
"lib1","SARS-CoV-2","GCACCATAAAGTGTAT",20,334.11,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","GCACCATAATCTTGGC",7,36.07,6,-4.76,2,3,1.22,0,">1 nonsynonymous","F44H I88A N130D P149M",4
"lib1","SARS-CoV-2","GCACCATAATGATTAC",4,19.29,6.09,-4.67,0.95,1.5,1.1,0.02,">1 nonsynonymous","F70E L95Y G101S",3
"lib1","SARS-CoV-2","GCACCATGAGATCTAC",1,31.43,9.86,-0.9,0.16,2.49,1.11,0.02,">1 nonsynonymous","T55V R78F F134M I142L",4
"lib1","SARS-CoV-2","GCACCATGCCAAAAAT",1,0.41,NA,NA,NA,NA,NA,NA,"stop","T3V A81* G86D W106F D112Q Y119T N130S",7
"lib1","SARS-CoV-2","GCACCATGGAACGCTC",3,7,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","S41M D90R V103A",3
"lib1","SARS-CoV-2","GCACCATGGATTTACC",3,31.62,10.28,-0.48,0.05,2.72,1.11,0,">1 nonsynonymous","A14T F44Y",2
"lib1","SARS-CoV-2","GCACCATGGTCCCATA",5,34.2,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A18V S19E K87T P133N L187S",5
"lib1","SARS-CoV-2","GCACCATTAATGCATA",2,2.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y21I",1
"lib1","SARS-CoV-2","GCACCCAAGAAGTGTA",4,24.13,7.66,-3.11,0.3,1.5,1.04,0.03,">1 nonsynonymous","V11H T15E V77W Y121S G152A C158G",6
"lib1","SARS-CoV-2","GCACCCAATATAAAGT",4,22.75,7.22,-3.55,0.17,1.5,1.06,0.01,">1 nonsynonymous","I2V N107K N157H",3
"lib1","SARS-CoV-2","GCACCCAATCCGAGAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","K128T G166*",2
"lib1","SARS-CoV-2","GCACCCACATCTAACG",3,10.51,10.67,-0.09,0.09,3,1.02,0,"1 nonsynonymous","L122C",1
"lib1","SARS-CoV-2","GCACCCACATCTACGA",9,45.25,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","R16M I80H L95E P197V",4
"lib1","SARS-CoV-2","GCACCCAGAAAGGATA",1,17.63,8.53,-2.23,0.17,1.5,1.11,0.01,">1 nonsynonymous","A14P F44E E141T",3
"lib1","SARS-CoV-2","GCACCCCACAAAGTAG",5,41.21,9.6,-1.17,0.1,1.92,1.05,0,">1 nonsynonymous","Y35H L60T W106M",3
"lib1","SARS-CoV-2","GCACCCCACTTTAATA",12,275.87,10.44,-0.33,0.03,2.91,1.02,0,"1 nonsynonymous","F12M",1
"lib1","SARS-CoV-2","GCACCCCAGAGCCAAC",6,85.08,9.98,-0.78,0.08,2.72,1.03,0,">1 nonsynonymous","S41G L60C G155R",3
"lib1","SARS-CoV-2","GCACCCCGACACGAGA",1,10.86,10.74,-0.03,0.13,2.81,1.13,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","GCACCCCGAGAGCGGA",2,16.98,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N64V F99L K114W Y121S",4
"lib1","SARS-CoV-2","GCACCCCGGAGAAGTC",2,0.53,NA,NA,NA,NA,NA,NA,"stop","D34* S113L",2
"lib1","SARS-CoV-2","GCACCCGAAAATCGAA",2,60.32,10.48,-0.29,0.02,2.92,1.03,0,">1 nonsynonymous","D59R G116H K199M",3
"lib1","SARS-CoV-2","GCACCCGCTACCACGT",7,34.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y50C G86V N118H C150A",4
"lib1","SARS-CoV-2","GCACCCGCTATGTCGA",1,13.38,8.72,-2.05,0.28,1.5,1.03,0.05,">1 nonsynonymous","T15L V77R T140N",3
"lib1","SARS-CoV-2","GCACCCTAAAAGGATA",1,11.78,9.65,-1.11,0.14,2.07,1.06,0.01,">1 nonsynonymous","P7F S36K G83A",3
"lib1","SARS-CoV-2","GCACCCTATGACACAT",6,227.96,8.69,-2.08,0.1,2.92,1.05,0,">1 nonsynonymous","T140S Y159L",2
"lib1","SARS-CoV-2","GCACCCTCGTCTCAAT",1,45.84,8.76,-2,0.11,2.69,1.16,0,">1 nonsynonymous","N4L Q168L",2
"lib1","SARS-CoV-2","GCACCCTGAATCTATC",2,42.94,10.22,-0.54,0.04,2.97,1,0,">1 nonsynonymous","E141K E154V",2
"lib1","SARS-CoV-2","GCACCCTGACAGTTAG",2,17.81,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I28F L60I A67S V103Y",4
"lib1","SARS-CoV-2","GCACCCTTTCGCGTCA",1,7.65,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","W23T C49W I88F W106C",4
"lib1","SARS-CoV-2","GCACCGAAAGCAAAAT",5,87.96,10.87,0.1,0.1,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACCGACCGGTTCCA",1,11.01,6,-4.76,2,3,1.03,0,">1 nonsynonymous","I2S S19K D98F Y121L K128A",5
"lib1","SARS-CoV-2","GCACCGCCAGCGACCT",6,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S V103Y",2
"lib1","SARS-CoV-2","GCACCGCTCCACACGT",2,37.63,10.29,-0.48,0.05,2.92,1.04,0,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","GCACCGGCTGGTGTAT",4,8.52,9.7,-1.06,0.21,2.05,1.04,0.01,">1 nonsynonymous","A33S P96H",2
"lib1","SARS-CoV-2","GCACCGGTCGCAAATT",10,102.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N107R R124S N130L L188P",4
"lib1","SARS-CoV-2","GCACCGTTACTTATTT",6,73.68,10.75,-0.02,0.08,2.94,1.03,0,"1 nonsynonymous","K48Q",1
"lib1","SARS-CoV-2","GCACCTAAAAAATAAG",3,14.54,9.73,-1.03,0.11,2.81,1.16,0.01,"1 nonsynonymous","I142K",1
"lib1","SARS-CoV-2","GCACCTAAAGAACTTT",3,16.03,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","F62S D98V Q144H E154S N171R T201V",6
"lib1","SARS-CoV-2","GCACCTAACAAAGGCT",7,166.32,10.62,-0.14,0.05,2.92,1.03,0,">1 nonsynonymous","G9N A81K",2
"lib1","SARS-CoV-2","GCACCTAACTAACAAC",15,154.03,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I28E S41G G83M Y123S T201P",5
"lib1","SARS-CoV-2","GCACCTAAGACGTTGG",1,29.8,8.79,-1.98,0.08,2.81,1.07,0,">1 nonsynonymous","G146V S200I",2
"lib1","SARS-CoV-2","GCACCTAGGACCAAAT",4,44.25,7.1,-3.67,0.46,1.5,1.04,0.06,">1 nonsynonymous","F44C D59R K94R D98A W106S I138S Y175Q",7
"lib1","SARS-CoV-2","GCACCTATCCAAGCTG",9,91.6,10.73,-0.04,0.08,2.82,1.09,0,"1 nonsynonymous","L95I",1
"lib1","SARS-CoV-2","GCACCTATTCTCGACG",5,48.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5Y A14I R25P G86L",4
"lib1","SARS-CoV-2","GCACCTCCAAAGCGAC",4,84.4,8.77,-1.99,0.11,2.65,1.13,0,">1 nonsynonymous","L57A Y119T",2
"lib1","SARS-CoV-2","GCACCTCGACCGTTTT",6,57.33,6,-4.76,0.84,1.5,1.15,0.01,">1 nonsynonymous","P133R G146M N157V Y178G T201P",5
"lib1","SARS-CoV-2","GCACCTCTGCGACTAG",1,35.02,10.36,-0.41,0.06,2.85,1.04,0,">1 nonsynonymous","L60D S200Y",2
"lib1","SARS-CoV-2","GCACCTCTTATAAACA",7,1.14,NA,NA,NA,NA,NA,NA,"stop","F8V R27* D98Q",3
"lib1","SARS-CoV-2","GCACCTGATAGTTCTT",12,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199Y",1
"lib1","SARS-CoV-2","GCACCTGCCCTCGGTC",5,187.84,9.86,-0.91,0.04,2.89,1.03,0,">1 nonsynonymous","A42Q K87D",2
"lib1","SARS-CoV-2","GCACCTGTAAACGCTA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","G9* R16L Y39S T55F F99S G116Y",6
"lib1","SARS-CoV-2","GCACCTGTCCGTTCTG",2,26.22,10.75,-0.02,0.08,2.92,1.03,0,">1 nonsynonymous","S53R N110A T201R",3
"lib1","SARS-CoV-2","GCACCTTAAGGTGGAT",5,0.48,NA,NA,NA,NA,NA,NA,"stop","D68* T85L Y123N Q168V",4
"lib1","SARS-CoV-2","GCACCTTGCTGTGCTA",3,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T N58F N120T G174R",4
"lib1","SARS-CoV-2","GCACCTTTAAGGTAAT",9,31.88,8.29,-2.48,0.31,1.5,1.04,0.03,">1 nonsynonymous","T85Y N120M P133R",3
"lib1","SARS-CoV-2","GCACCTTTAGACTGTA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","T85K F167*",2
"lib1","SARS-CoV-2","GCACCTTTTACTTGAC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","N1L S53V P169*",3
"lib1","SARS-CoV-2","GCACGAAAATAGGACA",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T G83P K94S",3
"lib1","SARS-CoV-2","GCACGAAATAGGACCA",10,190.24,9.37,-1.4,0.1,2.07,1.13,0,">1 nonsynonymous","T55S T85F Y121S S129K",4
"lib1","SARS-CoV-2","GCACGAAATTCGGTCT",4,23.35,6,-4.76,1.13,1.5,1.18,0.05,">1 nonsynonymous","A81G Q84I N92A",3
"lib1","SARS-CoV-2","GCACGAACAACCTTCG",2,22.93,6.34,-4.42,0.67,1.5,1.14,0.02,">1 nonsynonymous","C6F A89L D98V",3
"lib1","SARS-CoV-2","GCACGAACAATTCGAC",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53L V103I S139W L187Q",4
"lib1","SARS-CoV-2","GCACGAACACAAAGGT",2,51.11,10.7,-0.06,0.07,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACGAACCCTCCGTC",6,15.99,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y119V T148L P161Y",3
"lib1","SARS-CoV-2","GCACGAACTTGAAAAG",2,39.36,6.15,-4.61,0.89,1.5,1.18,0.03,">1 nonsynonymous","F12N S45Y C61T D90W F156W",5
"lib1","SARS-CoV-2","GCACGAAGCCTCACTA",5,69.82,10.72,-0.04,0.05,2.88,1.1,0,"1 nonsynonymous","N110A",1
"lib1","SARS-CoV-2","GCACGAATCAAATGGC",2,10.35,6.27,-4.49,1.08,1.5,1.1,0.06,">1 nonsynonymous","S36E S45N N64G A89S A105D E141S G174S",7
"lib1","SARS-CoV-2","GCACGAATCAGTGTAT",1,16.31,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","N4K S41H Y93S",3
"lib1","SARS-CoV-2","GCACGAATCTGAGGAA",6,50.34,10.84,0.07,0.07,2.87,1.02,0,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","GCACGAATGCCACGAT",4,30.3,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","T15I F70V T140M V181Y",4
"lib1","SARS-CoV-2","GCACGACAGAAACACA",4,18.08,10.24,-0.52,0.12,2.86,1.01,0.01,">1 nonsynonymous","N13K S43Y",2
"lib1","SARS-CoV-2","GCACGACAGAGAAATT",10,159.38,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N92V T100M",2
"lib1","SARS-CoV-2","GCACGACCAGAATTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T148*",1
"lib1","SARS-CoV-2","GCACGACTAGCTAGGA",3,37.07,10.23,-0.54,0.06,2.91,1.01,0,">1 nonsynonymous","K87Q P197G",2
"lib1","SARS-CoV-2","GCACGAGAGCGGGAAA",10,117.83,6.14,-4.63,0.6,1.5,1.17,0.01,">1 nonsynonymous","W23P Y159I",2
"lib1","SARS-CoV-2","GCACGAGCAGGTTAAC",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L G86T F99L",3
"lib1","SARS-CoV-2","GCACGAGGTTTCTACC",2,46.59,10.73,-0.03,0.1,2.82,1.11,0,">1 nonsynonymous","G9M V37A",2
"lib1","SARS-CoV-2","GCACGATAGTAGACCT",15,173.08,8.02,-2.74,0.18,1.5,1.12,0.01,">1 nonsynonymous","G9R G74R S139Q K199N",4
"lib1","SARS-CoV-2","GCACGATGACACGACA",1,63.09,10.75,-0.02,0.07,2.93,1.04,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","GCACGATGCCACAGTG",5,69.96,9.89,-0.88,0.09,1.96,1.07,0,">1 nonsynonymous","G51V N130T P149H",3
"lib1","SARS-CoV-2","GCACGATGTGTGCCAG",3,8.97,8.32,-2.45,0.48,1.69,1.29,0.03,">1 nonsynonymous","N13S S41Y Y91S",3
"lib1","SARS-CoV-2","GCACGATTACAACATT",3,68.83,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D59G G172I T201N",3
"lib1","SARS-CoV-2","GCACGCAAATACTTTC",4,61.28,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Q84R R136G Y165L",3
"lib1","SARS-CoV-2","GCACGCAATCTATTTT",2,56.78,9.89,-0.88,0.15,2.11,1.11,0.01,">1 nonsynonymous","C6I Y35F C49W",3
"lib1","SARS-CoV-2","GCACGCAATTTACCAT",1,12.36,10.26,-0.5,0.15,2.9,1.02,0.01,">1 nonsynonymous","C61F K114W Y123K",3
"lib1","SARS-CoV-2","GCACGCAGGGATAGGT",9,25.41,9.16,-1.6,0.37,1.5,1,0.06,">1 nonsynonymous","A14M S36Y C49N S113L Y178P",5
"lib1","SARS-CoV-2","GCACGCATCCGAGACT",1,46.87,9.94,-0.82,0.09,2.76,1.07,0,">1 nonsynonymous","D59Y N110K N118D P149L",4
"lib1","SARS-CoV-2","GCACGCATGAACAAAC",8,13.12,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13Q I80K Y119L T140Y Y165P",5
"lib1","SARS-CoV-2","GCACGCCAAATTAAAC",5,67.19,7.14,-3.62,0.25,1.72,1.19,0.01,">1 nonsynonymous","A67S Y143W G166S",3
"lib1","SARS-CoV-2","GCACGCCACGTGATCA",3,18.79,9.74,-1.03,0.08,2.92,1.03,0,">1 nonsynonymous","C6F R27I G174S",3
"lib1","SARS-CoV-2","GCACGCCATAAATACG",10,6.01,NA,NA,NA,NA,NA,NA,"stop","V103* C150W L187M",3
"lib1","SARS-CoV-2","GCACGCCGTTGTTTAA",1,7.32,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F12S K56H V65F R73L G83I K87V T148C",7
"lib1","SARS-CoV-2","GCACGCCTGAAATTGG",1,41.05,10.41,-0.35,0.08,2.75,1.06,0,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","GCACGCCTTATCTCTG",3,60.64,10.76,-0.01,0.06,2.88,1.04,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","GCACGCGATATAACGG",12,153.77,10.69,-0.08,0.04,2.92,1.02,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","GCACGCGATCTTATAG",4,9.56,9.08,-1.68,0.14,1.93,1.18,0.01,">1 nonsynonymous","G155T G174T P191L G196A",4
"lib1","SARS-CoV-2","GCACGCTATATAAAAC",5,73.15,10.44,-0.33,0.06,2.9,1.03,0,"1 nonsynonymous","D75L",1
"lib1","SARS-CoV-2","GCACGGCATCGCACTG",1,78.39,6,-4.76,0.68,1.5,1.14,0.01,">1 nonsynonymous","C61R R78M D90N L122W C150N",5
"lib1","SARS-CoV-2","GCACGGCGAATAAGTC",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95I Y119A",2
"lib1","SARS-CoV-2","GCACGGCGGGTGCGGC",4,45.45,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86P N92F S129P",3
"lib1","SARS-CoV-2","GCACGGGGATTAAAAA",1,5.32,10.61,-0.15,0.05,3,1.01,0,">1 nonsynonymous","N110E N120L",2
"lib1","SARS-CoV-2","GCACGGGTACAATGAA",2,41.1,10.8,0.04,0.12,2.78,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","GCACGGGTGGGCTTAT",1,11.03,8.77,-2,0.17,2.19,1.14,0.01,">1 nonsynonymous","Y35N V52S Y66T K87I Q163R",5
"lib1","SARS-CoV-2","GCACGGTTCTTAGATT",2,20.92,10.53,-0.24,0.08,2.88,1.06,0,">1 nonsynonymous","I2Q K87H",2
"lib1","SARS-CoV-2","GCACGGTTTATGTAAA",3,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L V103D S184P C195T",4
"lib1","SARS-CoV-2","GCACGGTTTGGTGCGG",5,82.01,10.66,-0.1,0.05,2.81,1.08,0,">1 nonsynonymous","K114V N151F Y178H",3
"lib1","SARS-CoV-2","GCACGTAACGGTCAAC",1,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L S19L N130F N171D",4
"lib1","SARS-CoV-2","GCACGTAAGGATCCCA",4,55.4,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40S D68L D90H N157F Q176S",5
"lib1","SARS-CoV-2","GCACGTAATCCCAAAT",21,179.74,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y93H F167S",2
"lib1","SARS-CoV-2","GCACGTAATCTTAACC",1,91.18,10.63,-0.13,0.05,2.88,1.06,0,">1 nonsynonymous","L5N A42N",2
"lib1","SARS-CoV-2","GCACGTATAATTCTTT",1,5.95,9.91,-0.85,0.23,2.8,1,0.02,">1 nonsynonymous","N1Y G152Y Q163E",3
"lib1","SARS-CoV-2","GCACGTGCGGCTTCCA",3,77.7,10.72,-0.04,0.07,2.91,1.06,0,">1 nonsynonymous","I2Q Y175F",2
"lib1","SARS-CoV-2","GCACGTGGACGCACCG",10,42.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y91S S113L Y119M",3
"lib1","SARS-CoV-2","GCACGTGTTTTTGAGT",5,46.64,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G101S W106R Y175T",3
"lib1","SARS-CoV-2","GCACGTTAGATATAAA",6,99.13,10.24,-0.53,0.04,2.93,1.03,0,">1 nonsynonymous","Y66E R78D",2
"lib1","SARS-CoV-2","GCACGTTCTCACGAAT",3,5.98,9.79,-0.97,0.41,1.66,1.44,0.07,">1 nonsynonymous","S41F F99V",2
"lib1","SARS-CoV-2","GCACGTTGTAACATTG",2,11.9,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6N A14H I80K D98G A190N",5
"lib1","SARS-CoV-2","GCACTAAAAATTTAAA",1,66.79,10.34,-0.43,0.05,2.9,1.05,0,">1 nonsynonymous","A22H K87I",2
"lib1","SARS-CoV-2","GCACTAAACTCGCTAA",4,17.46,8.97,-1.8,0.26,1.5,1,0.04,">1 nonsynonymous","A67H N110M",2
"lib1","SARS-CoV-2","GCACTAAAGACACGGA",3,15.35,10.15,-0.61,0.16,2.66,1.19,0.01,">1 nonsynonymous","F44S G83C L188N",3
"lib1","SARS-CoV-2","GCACTAAATACAGCTA",4,61.4,10.25,-0.51,0.06,2.83,1.05,0,">1 nonsynonymous","T15I V37R",2
"lib1","SARS-CoV-2","GCACTAACTGACACAG",8,52.4,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2S R124P T148R N151R G166H",5
"lib1","SARS-CoV-2","GCACTAAGCACGCATG",3,0.36,NA,NA,NA,NA,NA,NA,"stop","S41D D68N K128* C150P",4
"lib1","SARS-CoV-2","GCACTAAGCGTGGTCA",7,97.66,10.73,-0.03,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACTAAGTTGGCCAA",1,84.72,10.09,-0.68,0.07,2.74,1.02,0,">1 nonsynonymous","N58T A105W T148I V153K",4
"lib1","SARS-CoV-2","GCACTAATAAGTTATC",2,112.39,9.78,-0.98,0.08,2.39,1.02,0,">1 nonsynonymous","V11F S41L N58C",3
"lib1","SARS-CoV-2","GCACTAATATATATTT",1,11.41,6.19,-4.57,0.39,2.58,1.22,0.01,">1 nonsynonymous","R16M N107G K128F I138D",4
"lib1","SARS-CoV-2","GCACTAATCAGTCCAT",2,10.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y N30R V103A",3
"lib1","SARS-CoV-2","GCACTAATCCTGTCAA",1,37.13,7.03,-3.73,0.25,1.5,1.11,0.01,">1 nonsynonymous","R16W R27Y L131C V173F",4
"lib1","SARS-CoV-2","GCACTAATGCTGCCCA",2,9.17,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91M P96L Y121L",3
"lib1","SARS-CoV-2","GCACTAATTATTCTAA",4,3.26,NA,NA,NA,NA,NA,NA,"stop","L5R C49L T63Y D90N Y119* R136K",6
"lib1","SARS-CoV-2","GCACTACAAAATGGCT",3,12.89,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G86L K114R",2
"lib1","SARS-CoV-2","GCACTACCAAAAGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9M C61R F167*",3
"lib1","SARS-CoV-2","GCACTACCATTTTACC",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65Q G146L P149S",3
"lib1","SARS-CoV-2","GCACTACCTCGCATCA",1,21.37,8.38,-2.38,0.21,2.33,1.1,0.02,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","GCACTACCTTACTCGA",2,55.62,10.57,-0.2,0.04,2.95,1,0,"1 nonsynonymous","I142F",1
"lib1","SARS-CoV-2","GCACTACTAATTATAA",1,49.69,10.56,-0.21,0.06,2.93,1.01,0,">1 nonsynonymous","P149V V153G",2
"lib1","SARS-CoV-2","GCACTACTTGCTACGT",2,15.48,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T85P D97L R127Q G146Y P161Y",5
"lib1","SARS-CoV-2","GCACTAGAAGGGTACT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","S41* T85C N120L R136M Y143V",5
"lib1","SARS-CoV-2","GCACTAGAGAGAGGAA",4,65.32,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","R124V F156Y P161M",3
"lib1","SARS-CoV-2","GCACTAGCGCCACGAG",1,36.22,10.79,0.03,0.11,2.75,1.08,0.01,"1 nonsynonymous","E141M",1
"lib1","SARS-CoV-2","GCACTAGGTTACATTG",10,1.96,NA,NA,NA,NA,NA,NA,"stop","I72* N120E E154A",3
"lib1","SARS-CoV-2","GCACTAGTTGATAGAC",5,101.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9A P82V F160T Y175S T201G",5
"lib1","SARS-CoV-2","GCACTATAAACAAATA",1,10.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34V P54I",2
"lib1","SARS-CoV-2","GCACTATATATCAAAA",9,3.08,NA,NA,NA,NA,NA,NA,"stop","K87* D98K Y178N",3
"lib1","SARS-CoV-2","GCACTATCAACTAATA",2,24.13,10.41,-0.36,0.05,3,1,0,">1 nonsynonymous","Y39T K48V K56L",3
"lib1","SARS-CoV-2","GCACTATCACCTCAAG",4,114.2,10.84,0.07,0.1,2.87,1.06,0,">1 nonsynonymous","L122Q T201K",2
"lib1","SARS-CoV-2","GCACTATCTCTATATT",3,29.85,10.1,-0.66,0.09,2.64,1.09,0,">1 nonsynonymous","A105V A190T",2
"lib1","SARS-CoV-2","GCACTATGAGGATTTT",3,20.64,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","A89M D97M Y121S T170L",4
"lib1","SARS-CoV-2","GCACTATTGAAATAGG",4,1.34,NA,NA,NA,NA,NA,NA,"stop","L5R Y39A Y91D E135S Y165* F185H K198R",7
"lib1","SARS-CoV-2","GCACTCAAACATGAAC",1,95.36,7.63,-3.14,0.36,1.5,1.17,0.04,">1 nonsynonymous","Y35H A42S G83N G117C",4
"lib1","SARS-CoV-2","GCACTCAAACGATCCA",10,56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21L I88N W106S G116Q R136L T201L",6
"lib1","SARS-CoV-2","GCACTCAACGCGCATG",8,98.63,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F44V Y93E A190V",3
"lib1","SARS-CoV-2","GCACTCAATATTTCCA",4,79.64,10.56,-0.2,0.06,2.91,1.05,0,">1 nonsynonymous","L122G P169R",2
"lib1","SARS-CoV-2","GCACTCACGTAGGAAG",3,44.99,10.84,0.08,0.09,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACTCAGCGGGACCG",4,65.67,10.55,-0.22,0.04,2.93,1.01,0,">1 nonsynonymous","D98T N110R C195V",3
"lib1","SARS-CoV-2","GCACTCATATAAAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","C102S T170*",2
"lib1","SARS-CoV-2","GCACTCCAACCTAACA",2,2.48,NA,NA,NA,NA,NA,NA,"stop","P7V S41I Y50F K114M Y143M E154*",6
"lib1","SARS-CoV-2","GCACTCCCAACTACTT",3,5.57,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","G9A Y91K D97R V103L",4
"lib1","SARS-CoV-2","GCACTCCGCGATGCCA",7,27.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T85F L95H C102W Y119F R127L",5
"lib1","SARS-CoV-2","GCACTCCGTGAAATTC",3,43.32,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","A14E G117Y N157S",3
"lib1","SARS-CoV-2","GCACTCCTGCCCCCTA",7,43.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I P96M K128P",3
"lib1","SARS-CoV-2","GCACTCCTTTAAAACG",8,51.19,9.07,-1.69,0.22,1.66,1.12,0.02,">1 nonsynonymous","Y35A D90I",2
"lib1","SARS-CoV-2","GCACTCGCCCTCAATG",2,0.66,NA,NA,NA,NA,NA,NA,"stop","I2* R27K F99G A105W G146W",5
"lib1","SARS-CoV-2","GCACTCGCTATAACGC",4,39.66,10.34,-0.43,0.1,2.87,1.06,0,">1 nonsynonymous","S41V F62T D90S V173L",4
"lib1","SARS-CoV-2","GCACTCGTTGAAATGT",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S G116K D137E N157T",4
"lib1","SARS-CoV-2","GCACTCTACTAGCAAA",5,112.55,10.12,-0.64,0.05,2.82,1,0,"1 nonsynonymous","P133K",1
"lib1","SARS-CoV-2","GCACTCTTTATTTGCC",2,19.1,10.07,-0.69,0.14,2.51,1.07,0.01,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","GCACTGAAATCTTACG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","N13E Y21M F44G D90T G146*",5
"lib1","SARS-CoV-2","GCACTGAACTCATTGA",1,6.74,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y39C D68M G86L T100K S184H",5
"lib1","SARS-CoV-2","GCACTGAAGTGAATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L A89F T201M",3
"lib1","SARS-CoV-2","GCACTGAAGTTTTTGG",3,68.09,10.81,0.04,0.03,2.9,1.06,0,">1 nonsynonymous","I2G N110R",2
"lib1","SARS-CoV-2","GCACTGACAAGAACCC",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R P96I Y123N P149G",4
"lib1","SARS-CoV-2","GCACTGACGCGACAGC",8,0.18,NA,NA,NA,NA,NA,NA,"stop","C6T S45*",2
"lib1","SARS-CoV-2","GCACTGACTCCTTATG",11,182.32,10.22,-0.55,0.04,2.83,1.03,0,">1 nonsynonymous","T15G N58H",2
"lib1","SARS-CoV-2","GCACTGACTTACATTG",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N V103W",2
"lib1","SARS-CoV-2","GCACTGAGATAAATTT",4,51.85,10.45,-0.31,0.06,2.85,1.12,0,">1 nonsynonymous","T15D P149R",2
"lib1","SARS-CoV-2","GCACTGAGTAACTGAG",3,30.5,9.65,-1.12,0.14,2.41,1.11,0.01,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","GCACTGATAAATAAGT",1,29.17,10.16,-0.6,0.09,2.75,1,0,">1 nonsynonymous","N13A K56E T85G",3
"lib1","SARS-CoV-2","GCACTGCAGTAGAAAC",4,2.59,NA,NA,NA,NA,NA,NA,"stop","F156* Q163H",2
"lib1","SARS-CoV-2","GCACTGCGATAGATTT",2,56.44,7.54,-3.22,0.15,1.57,1.13,0.01,">1 nonsynonymous","Y21H D137I",2
"lib1","SARS-CoV-2","GCACTGGATAAAATCT",1,0.34,NA,NA,NA,NA,NA,NA,"stop","G86* N92H I142N P149L",4
"lib1","SARS-CoV-2","GCACTGGCGAATACTA",10,61.96,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N24W C61V A89D C102S P149I N157C",6
"lib1","SARS-CoV-2","GCACTGGGTAGAACGA",1,3.14,NA,NA,NA,NA,NA,NA,"stop","N24E N118R E135* T201Y",4
"lib1","SARS-CoV-2","GCACTGTAAAGGTGAA",3,189.99,10.08,-0.68,0.05,2.61,1.04,0,">1 nonsynonymous","D90C V115K H189I",3
"lib1","SARS-CoV-2","GCACTGTAAATCCACT",4,9.73,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","D68K E135L G174W",3
"lib1","SARS-CoV-2","GCACTGTATTAACCGG",2,17.76,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","L5T S45A R124T E141R",4
"lib1","SARS-CoV-2","GCACTGTCCACTCTGT",4,40,9.85,-0.91,0.08,2.76,1.11,0,">1 nonsynonymous","D59E K87T W106F S164V K199N",5
"lib1","SARS-CoV-2","GCACTGTGAACTTGCC",2,18.49,8.94,-1.82,0.12,3,1.08,0.01,"1 nonsynonymous","G117P",1
"lib1","SARS-CoV-2","GCACTTAAAGCCACAG",1,20.78,6.98,-3.79,0.5,1.5,1.09,0.08,">1 nonsynonymous","S45I P96H T201C",3
"lib1","SARS-CoV-2","GCACTTAACACAACAT",1,50.56,9.64,-1.13,0.16,1.84,1.12,0.01,">1 nonsynonymous","C31S V77M",2
"lib1","SARS-CoV-2","GCACTTAATAGAGAAT",2,56.54,9.8,-0.97,0.12,2.24,1.07,0.01,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","GCACTTACACAATACT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45D T170*",2
"lib1","SARS-CoV-2","GCACTTACTACTTTGA",1,13.72,9.36,-1.41,0.18,2.79,1.06,0.01,">1 nonsynonymous","L60D N118S",2
"lib1","SARS-CoV-2","GCACTTACTGGTAAGG",1,7.6,10.82,0.05,0.07,3,1,0,"1 nonsynonymous","V115K",1
"lib1","SARS-CoV-2","GCACTTAGATGGTTAT",4,45.89,8.89,-1.88,0.12,2.53,1.13,0.01,">1 nonsynonymous","N1D G117H N130Q T148I",4
"lib1","SARS-CoV-2","GCACTTATCACTTACG",2,123.08,10.28,-0.49,0.06,2.76,1.01,0,"1 nonsynonymous","P133H",1
"lib1","SARS-CoV-2","GCACTTATGACAAAAA",5,65.49,9.79,-0.97,0.05,2.73,1.07,0,">1 nonsynonymous","R127A T170S",2
"lib1","SARS-CoV-2","GCACTTCAGACATCTA",1,22.51,10.27,-0.5,0.09,2.08,1.06,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GCACTTCCATCCCTCA",4,56.89,9.39,-1.37,0.27,1.56,1.11,0.03,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","GCACTTCCCAATCGCG",1,59.15,8.3,-2.46,0.26,1.64,1.11,0.03,">1 nonsynonymous","D98A S113W L122R G152D",4
"lib1","SARS-CoV-2","GCACTTCCCTCAAAAC",3,0.37,NA,NA,NA,NA,NA,NA,"stop","A42* G51N",2
"lib1","SARS-CoV-2","GCACTTCCTGACGCGA",2,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L Y93E T140V",3
"lib1","SARS-CoV-2","GCACTTCGGTCCCCAG",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R F62C A105S",3
"lib1","SARS-CoV-2","GCACTTGAGCCAATGC",3,1.95,NA,NA,NA,NA,NA,NA,"stop","N1L W23Q K94F W106G Y123F N157*",6
"lib1","SARS-CoV-2","GCACTTGCACCATTAC",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V S19L A89N",3
"lib1","SARS-CoV-2","GCACTTGCCGCCTAAA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","D34* V103L",2
"lib1","SARS-CoV-2","GCACTTGGCTGTGACA",10,47.86,8.53,-2.24,0.29,1.5,1.07,0.02,">1 nonsynonymous","S41L G83R K114L S139I",4
"lib1","SARS-CoV-2","GCACTTGTCCCCACAT",2,98.95,10.1,-0.67,0.05,2.7,1.01,0,">1 nonsynonymous","R16I A33R",2
"lib1","SARS-CoV-2","GCACTTGTGGGGAGGT",5,83.31,10.79,0.03,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCACTTTACTCAGTAA",3,18.68,10.78,0.02,0.09,2.85,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","GCACTTTATAATCATT",5,27.3,6,-4.76,0.58,3,1.1,0,">1 nonsynonymous","V11S S43P G51L I80T",4
"lib1","SARS-CoV-2","GCACTTTATCTACGAA",5,41.88,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","K132E L183G",2
"lib1","SARS-CoV-2","GCACTTTCATTGTAAT",2,19.42,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59A F99C I142R",3
"lib1","SARS-CoV-2","GCACTTTCGGCTTGAA",4,49.83,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I72F K87S",2
"lib1","SARS-CoV-2","GCACTTTGCATCACCA",1,83.88,6.33,-4.44,0.47,1.5,1.18,0.01,">1 nonsynonymous","I28T G51S S69K Q168G V181N",5
"lib1","SARS-CoV-2","GCAGAAAAAAAGAAAC",1,89.23,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R25T A105L",2
"lib1","SARS-CoV-2","GCAGAAAAATATAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S N92V",2
"lib1","SARS-CoV-2","GCAGAAAACATAGAAA",5,27.17,9.36,-1.4,0.17,1.73,1.11,0.02,">1 nonsynonymous","N13I K56S G155S",3
"lib1","SARS-CoV-2","GCAGAAAACATCTACC",2,8.42,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T15N P96T D137C N151M",4
"lib1","SARS-CoV-2","GCAGAAAAGCATTGAG",1,7.92,10.61,-0.15,0.17,2.71,1.16,0.01,">1 nonsynonymous","S43D D90N D97I K198E",4
"lib1","SARS-CoV-2","GCAGAAAAGCCCTGTG",3,19.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40C F70T",2
"lib1","SARS-CoV-2","GCAGAAAAGCTACGAT",2,21.1,6,-4.76,1.56,1.5,1.15,0.03,">1 nonsynonymous","Y35W F44P Y66L D97H V182N",5
"lib1","SARS-CoV-2","GCAGAAAATACTTCGA",2,36.06,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N40I A67N V153A T201Y",4
"lib1","SARS-CoV-2","GCAGAAAATCATATTG",6,28.58,8.44,-2.32,0.17,1.81,1.11,0.01,">1 nonsynonymous","G9S T15L D34G T63P T170Q",5
"lib1","SARS-CoV-2","GCAGAAACAAACACCT",5,62.66,10.72,-0.04,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAAACATACGGCT",3,66.43,10.73,-0.04,0.05,2.95,1.04,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","GCAGAAAGTAAACCTG",7,57.89,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F62T D112K",2
"lib1","SARS-CoV-2","GCAGAAAGTTGTGAAG",1,18.5,8.62,-2.14,0.1,2.72,1.06,0.01,">1 nonsynonymous","V153T N171P",2
"lib1","SARS-CoV-2","GCAGAAATAGGGTAAA",5,3.19,NA,NA,NA,NA,NA,NA,"stop","S69M S139L V173*",3
"lib1","SARS-CoV-2","GCAGAAATTACTAAAA",1,21.99,10.53,-0.23,0.06,2.92,1.02,0,">1 nonsynonymous","V37R K48V",2
"lib1","SARS-CoV-2","GCAGAACAAAAAAGGA",2,18.35,6.04,-4.73,0.62,1.5,1.14,0.01,">1 nonsynonymous","I2Q V181E",2
"lib1","SARS-CoV-2","GCAGAACACCTACTAA",4,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102T R127K P133S",3
"lib1","SARS-CoV-2","GCAGAACCGGCGGTAT",4,22.04,10.91,0.14,0.09,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAACCTAGATGGG",6,26.91,7.2,-3.56,0.27,1.5,1.11,0.02,">1 nonsynonymous","C31F L60C F185T",3
"lib1","SARS-CoV-2","GCAGAACGCCCATACT",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L P54V L125N",3
"lib1","SARS-CoV-2","GCAGAACTTACGCCTA",4,1.02,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","GCAGAAGATACTGTTC",4,107.13,10.83,0.06,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAAGATGTTATGC",5,61.72,10.49,-0.27,0.07,2.83,1.04,0,">1 nonsynonymous","A33Y K56W",2
"lib1","SARS-CoV-2","GCAGAAGGATAGTACG",6,22.57,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","P7L Y93A Y121D",3
"lib1","SARS-CoV-2","GCAGAAGGTAACTATG",1,21.68,6,-4.76,2,1.5,1.36,0.02,">1 nonsynonymous","I2F S19E N107R",3
"lib1","SARS-CoV-2","GCAGAAGTTTCACAGT",3,9.29,10.06,-0.71,0.23,2.78,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAATATTATCTGC",10,222.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48G P96W Y119C",3
"lib1","SARS-CoV-2","GCAGAATCGTCATTTG",8,104.55,10.2,-0.56,0.05,2.88,1,0,">1 nonsynonymous","C31S S129T",2
"lib1","SARS-CoV-2","GCAGAATCTAGATTCC",1,41.6,8.61,-2.15,0.17,1.88,1.15,0.01,">1 nonsynonymous","L5T N107A Y143L",3
"lib1","SARS-CoV-2","GCAGAATGATGACAAT",1,72.4,10.65,-0.12,0.08,2.66,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAATTCATGCAAT",3,105.22,8.66,-2.1,0.21,1.5,1.07,0.02,">1 nonsynonymous","V77F P149L Y178V",3
"lib1","SARS-CoV-2","GCAGAATTCTATTGGC",6,172.31,9.77,-0.99,0.07,2.74,1.07,0,">1 nonsynonymous","N120S F126C E141N",3
"lib1","SARS-CoV-2","GCAGAATTGTATGACC",6,21.61,10.68,-0.09,0.16,2.88,1.1,0.01,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","GCAGACAAATAAGTTC",3,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T85K",1
"lib1","SARS-CoV-2","GCAGACAAATAGTAGT",8,2.3,NA,NA,NA,NA,NA,NA,"stop","S36* G86D",2
"lib1","SARS-CoV-2","GCAGACAATCCATCTT",5,66.17,8.96,-1.81,0.12,1.63,1.13,0.01,">1 nonsynonymous","F12S K114L T201N",3
"lib1","SARS-CoV-2","GCAGACAATGCAGATT",5,52.41,10.76,0,0.07,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAGACACAAGATAGC",12,121.68,9.54,-1.23,0.08,1.84,1.09,0,">1 nonsynonymous","G86D I138L",2
"lib1","SARS-CoV-2","GCAGACAGATAGCCAA",8,19.54,6.75,-4.01,0.17,1.5,1.03,0.01,">1 nonsynonymous","F70R G83L K94Y P149G V182T",5
"lib1","SARS-CoV-2","GCAGACATAATATATT",1,15.14,8.17,-2.59,0.27,1.64,1.13,0.01,"1 nonsynonymous","N92D",1
"lib1","SARS-CoV-2","GCAGACATCTGCATCC",6,136.93,10.72,-0.04,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGACATGTATATAC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","V37Y P82Y G117* T148D",4
"lib1","SARS-CoV-2","GCAGACATGTTCAAAC",9,31.93,8.75,-2.01,0.41,1.5,1,0.07,"1 nonsynonymous","I72R",1
"lib1","SARS-CoV-2","GCAGACCAACGACTCA",1,8.06,10.78,0.02,0.13,2.97,1,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","GCAGACCACGAAATAG",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K V77T G86I D97C",4
"lib1","SARS-CoV-2","GCAGACCAGTGAACTT",4,44.74,6,-4.76,2,3,1.17,0,">1 nonsynonymous","C61S Y66Q D90E D137N",4
"lib1","SARS-CoV-2","GCAGACCTCCTGGAAT",5,90.87,9.41,-1.36,0.07,2.9,1.06,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","GCAGACCTCGGGGTGT",4,111.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S36C I88Y V103Q Y121C Q176L",5
"lib1","SARS-CoV-2","GCAGACGAACATACTA",2,57.65,10.82,0.05,0.08,2.91,1.02,0,"1 nonsynonymous","H189W",1
"lib1","SARS-CoV-2","GCAGACGACCATAACG",3,27.52,7.08,-3.69,0.34,1.58,1.13,0.02,">1 nonsynonymous","F17K A89Y Y121V",3
"lib1","SARS-CoV-2","GCAGACTAAACTCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S K87Q P149N V182P",4
"lib1","SARS-CoV-2","GCAGACTAACATCAGT",2,23.97,10.11,-0.65,0.04,2.99,1,0,">1 nonsynonymous","N1S D34C",2
"lib1","SARS-CoV-2","GCAGACTACAGACCTG",15,183.07,10.73,-0.04,0.05,2.92,1.05,0,"1 nonsynonymous","N109L",1
"lib1","SARS-CoV-2","GCAGACTGAAAATACG",2,30.36,9.77,-0.99,0.16,2.25,1,0.01,">1 nonsynonymous","D97C N107S",2
"lib1","SARS-CoV-2","GCAGACTTATGCTTAA",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S W106N",2
"lib1","SARS-CoV-2","GCAGACTTTTAGACGG",2,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M C61S A81T K114C",4
"lib1","SARS-CoV-2","GCAGAGAAAACATTAT",3,58.68,7.02,-3.74,0.23,1.66,1.16,0.01,">1 nonsynonymous","Q168P K198A",2
"lib1","SARS-CoV-2","GCAGAGAAACTTTCAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8I",1
"lib1","SARS-CoV-2","GCAGAGAAAGTCTCCA",5,24,9.82,-0.94,0.17,2.01,1,0.01,">1 nonsynonymous","A89Q K198D",2
"lib1","SARS-CoV-2","GCAGAGAACAAGATTG",4,11.66,10.62,-0.15,0.11,2.92,1.1,0.01,">1 nonsynonymous","C61T E141S",2
"lib1","SARS-CoV-2","GCAGAGAATAACTTCC",1,5.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P197F",1
"lib1","SARS-CoV-2","GCAGAGACCGTATTAC",14,6.92,NA,NA,NA,NA,NA,NA,"stop","I28R D34I D59* K94S E141*",5
"lib1","SARS-CoV-2","GCAGAGACGTATCCGT",3,93.71,10.69,-0.07,0.07,2.89,1.09,0,">1 nonsynonymous","Y178F T201D",2
"lib1","SARS-CoV-2","GCAGAGAGTTACTAAC",1,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N I88P",2
"lib1","SARS-CoV-2","GCAGAGATCATCAAAA",3,54.28,10.15,-0.62,0.06,2.92,1,0,">1 nonsynonymous","K87Y F156V",2
"lib1","SARS-CoV-2","GCAGAGATCCAGCGAT",6,95.91,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V52C D98V E141A Y175I",4
"lib1","SARS-CoV-2","GCAGAGATTTCAATCA",1,26.92,10.23,-0.53,0.1,2.92,1.03,0,">1 nonsynonymous","F44C K199A",2
"lib1","SARS-CoV-2","GCAGAGCGAACGATAG",3,19.76,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W106D P191L P197V",3
"lib1","SARS-CoV-2","GCAGAGCGAATCGAGT",2,7.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y50T L60E G116W P177E",4
"lib1","SARS-CoV-2","GCAGAGGACAGTCTGA",2,108.18,10.65,-0.11,0.03,2.89,1.04,0,"1 nonsynonymous","G9F",1
"lib1","SARS-CoV-2","GCAGAGGAGAGCCCAG",3,61.72,10.69,-0.08,0.07,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAGAGGATTCGGCTG",11,264.06,10.61,-0.16,0.04,2.9,1.05,0,">1 nonsynonymous","D98T E141S",2
"lib1","SARS-CoV-2","GCAGAGGCAACATAGA",2,7.95,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","Y35R D68L G83T",3
"lib1","SARS-CoV-2","GCAGAGGCCGCGCGAA",6,59.18,6.04,-4.72,0.46,1.5,1.15,0.01,">1 nonsynonymous","N1K P54L D97K Y123D S129M",5
"lib1","SARS-CoV-2","GCAGAGGGAAACTGGC",3,22.57,10.8,0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGAGTACACATATA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6F A145*",2
"lib1","SARS-CoV-2","GCAGAGTATCTACAGC",5,26.67,9.67,-1.09,0.19,2.06,1.07,0.01,">1 nonsynonymous","S53G K94S K198N",3
"lib1","SARS-CoV-2","GCAGAGTTACAAAACA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","Y91N R127V K132*",3
"lib1","SARS-CoV-2","GCAGAGTTATTTTATG",3,103.97,8.73,-2.03,0.08,2.75,1.08,0,">1 nonsynonymous","N120P G152H A192E",3
"lib1","SARS-CoV-2","GCAGAGTTCACCTCCA",1,6.19,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49I D59I K87A C102R",4
"lib1","SARS-CoV-2","GCAGATAAGATTCAAA",3,22.7,8.87,-1.9,0.26,1.7,1.13,0.03,">1 nonsynonymous","P54V P82T P149Q",3
"lib1","SARS-CoV-2","GCAGATAATAACTGAA",6,90.93,8.95,-1.81,0.09,2.69,1.15,0,">1 nonsynonymous","A145S G146R",2
"lib1","SARS-CoV-2","GCAGATACGCATTTAT",3,50.2,9.91,-0.85,0.11,2.74,1.04,0.01,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","GCAGATACGCTATTAA",12,89.56,6,-4.76,1.36,1.5,1.12,0,">1 nonsynonymous","Y39R K87I G117P F126M R179A",5
"lib1","SARS-CoV-2","GCAGATAGAAAGAACC",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R F8Y P96G V103T",4
"lib1","SARS-CoV-2","GCAGATATAAGAAATC",7,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q P96I L122N S129Y F160Y",5
"lib1","SARS-CoV-2","GCAGATATTAGCAATG",2,48.93,10.88,0.11,0.09,2.88,1.04,0,"1 nonsynonymous","A192T",1
"lib1","SARS-CoV-2","GCAGATGAAATAACCT",4,166.89,10.73,-0.04,0.04,2.91,1.05,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","GCAGATGCATTAAGTG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","G9R N13* N109K G146E",4
"lib1","SARS-CoV-2","GCAGATGCCACTACAT",3,129.68,10.31,-0.46,0.04,2.92,1.02,0,">1 nonsynonymous","Y91L A145V",2
"lib1","SARS-CoV-2","GCAGATTAGGACTTCC",4,1.15,NA,NA,NA,NA,NA,NA,"stop","Y66* Y119L",2
"lib1","SARS-CoV-2","GCAGATTATAAGGACA",2,13.04,6.04,-4.72,0.71,1.5,1.13,0.01,">1 nonsynonymous","K48L C61A D90K T100L F134P N151H",6
"lib1","SARS-CoV-2","GCAGATTCCGAAACTG",1,13.09,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","N40T V71L K94E",3
"lib1","SARS-CoV-2","GCAGATTCCTAAAGTA",14,92.32,9.33,-1.43,0.11,1.77,1.14,0.01,">1 nonsynonymous","S41R K87R K132Y E141L S147Y",5
"lib1","SARS-CoV-2","GCAGATTTAACAGCAA",1,10.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S19R S41D N107K",3
"lib1","SARS-CoV-2","GCAGATTTACCAATCG",2,31.98,10.77,0.01,0.1,2.83,1.13,0,"1 nonsynonymous","A190R",1
"lib1","SARS-CoV-2","GCAGATTTGACCTAAG",1,3.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E154C",1
"lib1","SARS-CoV-2","GCAGATTTTAACAGTA",10,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S29E T55C N107T S113I L122T Q163A",7
"lib1","SARS-CoV-2","GCAGATTTTTTGACCG",2,36.36,10.65,-0.12,0.09,2.93,1.02,0,"1 nonsynonymous","N120A",1
"lib1","SARS-CoV-2","GCAGCAAAAGAGTGAC",3,7.69,7.37,-3.4,0.38,1.5,1.08,0.06,">1 nonsynonymous","W23M S41Y G83H L188I",4
"lib1","SARS-CoV-2","GCAGCAAAGTTCACAG",2,6.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51M S129L F167L",3
"lib1","SARS-CoV-2","GCAGCAACAGACAATC",4,134.43,10.63,-0.14,0.05,2.93,1.05,0,">1 nonsynonymous","T3V G83H N130V T201R",4
"lib1","SARS-CoV-2","GCAGCAACCCAATGCT",2,15.34,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I2V R25P S139M L162K",4
"lib1","SARS-CoV-2","GCAGCAACGAATGCCA",2,67.82,10.67,-0.09,0.06,2.91,1.06,0,">1 nonsynonymous","L122W T201M",2
"lib1","SARS-CoV-2","GCAGCAAGACAGATTC",2,11.63,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","N13H S41L P54T S113V F160S",5
"lib1","SARS-CoV-2","GCAGCAAGAGAAAAAA",2,9.82,10.24,-0.53,0.07,2.85,1.04,0,">1 nonsynonymous","Y39D P149W",2
"lib1","SARS-CoV-2","GCAGCAAGCTGAGTTA",15,188.13,7.13,-3.64,0.28,1.5,1.16,0.02,"1 nonsynonymous","D112G",1
"lib1","SARS-CoV-2","GCAGCAAGTCCAGTAA",7,43.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85K A89W Y121I T140G S164Y",5
"lib1","SARS-CoV-2","GCAGCAATAGATCATC",3,0,NA,NA,NA,NA,NA,NA,"stop","P7R A42G I88* Y121C E141* K198H",6
"lib1","SARS-CoV-2","GCAGCAATAGATTTAT",3,122.78,10.73,-0.03,0.04,2.93,1.01,0,">1 nonsynonymous","E10M L188T",2
"lib1","SARS-CoV-2","GCAGCACAACGAGTTA",1,8.01,6.43,-4.33,0.4,1.62,1.16,0.01,">1 nonsynonymous","S41K Y93S I138Q",3
"lib1","SARS-CoV-2","GCAGCACAATGTCCCC",2,54.51,10.89,0.13,0.08,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCACATCTCTTCG",3,58.55,10.69,-0.08,0.05,2.89,1.07,0,">1 nonsynonymous","N64S T140R P149R",3
"lib1","SARS-CoV-2","GCAGCACCAGAAAACA",1,50.52,10.67,-0.1,0.1,2.8,1.09,0,">1 nonsynonymous","S45G P197M",2
"lib1","SARS-CoV-2","GCAGCACCCCTGTCTA",4,18.77,7.42,-3.35,0.4,1.63,1.13,0.04,">1 nonsynonymous","R25F V103P A145T",3
"lib1","SARS-CoV-2","GCAGCACCTTAACCTA",2,104.62,10.68,-0.08,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCAGAAACCTAAC",2,85.4,9.23,-1.53,0.09,2.84,1.12,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GCAGCAGATATCAAAT",4,50.62,10.17,-0.59,0.07,2.94,1.04,0,">1 nonsynonymous","F62I Y121L K198Q",3
"lib1","SARS-CoV-2","GCAGCATCTATTGAGG",2,42.3,10.86,0.09,0.11,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCATGTAAAAATT",8,43,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","F62L I88L N107Y V115R I138L P161S G174L",7
"lib1","SARS-CoV-2","GCAGCATTGTAGCATG",15,156.64,9.98,-0.78,0.08,2.45,1.01,0,">1 nonsynonymous","V11L N58M S184K",3
"lib1","SARS-CoV-2","GCAGCATTTAAAAGAT",3,187.32,10.32,-0.45,0.04,2.84,1.04,0,">1 nonsynonymous","S129C E135D",2
"lib1","SARS-CoV-2","GCAGCCAGTAATACGT",5,60.29,10.18,-0.58,0.06,2.67,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GCAGCCATGAGTCTTG",3,101.16,10.28,-0.49,0.06,2.87,1,0,">1 nonsynonymous","T55K P96S I104Y",3
"lib1","SARS-CoV-2","GCAGCCCAAGCTTCCG",3,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M N64T D90V D137P K199G",5
"lib1","SARS-CoV-2","GCAGCCCCGAGGCGAA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","V32* N40L L122*",3
"lib1","SARS-CoV-2","GCAGCCCTCACACACG",1,88.91,10.6,-0.16,0.04,2.92,1.02,0,">1 nonsynonymous","K48N S129F",2
"lib1","SARS-CoV-2","GCAGCCCTCGTTGATG",7,53,9.81,-0.96,0.12,1.94,1.11,0.01,"1 nonsynonymous","Q79V",1
"lib1","SARS-CoV-2","GCAGCCCTTGAACCCC",1,16.42,10.67,-0.09,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCCGATTAACGTA",6,107.05,10.71,-0.06,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCCTCATATGTTA",7,64.46,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","P82F Q168R",2
"lib1","SARS-CoV-2","GCAGCCTGAGAAAACG",1,100.58,10.54,-0.22,0.03,2.9,1.02,0,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","GCAGCGACCAATTCGC",2,10.24,9.5,-1.26,0.15,2.72,1.11,0.01,">1 nonsynonymous","G146R A192N",2
"lib1","SARS-CoV-2","GCAGCGCACAAGTGAG",3,49.32,8.44,-2.32,0.17,1.5,1.07,0.01,">1 nonsynonymous","V52S G155I Q168S",3
"lib1","SARS-CoV-2","GCAGCGCAGCTACTCC",9,139.83,10.04,-0.72,0.09,2.63,1.03,0,">1 nonsynonymous","A33H F44L",2
"lib1","SARS-CoV-2","GCAGCGCGGACGTACG",5,90,10.56,-0.21,0.06,2.87,1.08,0,">1 nonsynonymous","S41A F160M",2
"lib1","SARS-CoV-2","GCAGCGCGGTACATCT",3,55.29,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V11P Y35V A42R G51S L57N N107L V153I",7
"lib1","SARS-CoV-2","GCAGCGGAAGCCTATG",3,52.01,9.5,-1.27,0.06,2.67,1.09,0,">1 nonsynonymous","Y35R F156L",2
"lib1","SARS-CoV-2","GCAGCTAAAAACATAT",1,28.23,9.91,-0.86,0.06,2.82,1,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","GCAGCTAAAGATATTA",2,29.88,10.14,-0.62,0.12,2.64,1.03,0.01,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","GCAGCTACACAAAAGG",2,23.26,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","G86V F160G L183Y",3
"lib1","SARS-CoV-2","GCAGCTACACTATTAG",8,92.7,10.79,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGCTAGCCTAGGAT",4,55.41,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W23H F47I F99M G116L I142F",5
"lib1","SARS-CoV-2","GCAGCTCAATACAACC",9,0,NA,NA,NA,NA,NA,NA,"stop","L57S A67L P82* F99V",4
"lib1","SARS-CoV-2","GCAGCTCCAATTCAAC",5,142.51,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N30T N40D N64I W106R G155F",5
"lib1","SARS-CoV-2","GCAGCTGTCAATAGAA",5,1.09,NA,NA,NA,NA,NA,NA,"stop","N4S C49V D68* Q79N Y143L",5
"lib1","SARS-CoV-2","GCAGCTGTCTATACGA",4,14.58,NA,NA,NA,NA,NA,NA,"stop","N4C A22E G86D T100*",4
"lib1","SARS-CoV-2","GCAGCTTCACAGCGCT",6,22.06,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G86N F167K S184P",3
"lib1","SARS-CoV-2","GCAGCTTTAAAGGTAG",4,40.78,9.18,-1.58,0.24,1.54,1.2,0.02,">1 nonsynonymous","Y50L T55Q Q163K",3
"lib1","SARS-CoV-2","GCAGGAACACAGGTTG",2,21.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G101Q G117Y T140F G174I V180T",5
"lib1","SARS-CoV-2","GCAGGAACACCAAGCC",6,68.77,10.61,-0.15,0.06,2.93,1.03,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","GCAGGAAGCACCGGCT",3,2.06,NA,NA,NA,NA,NA,NA,"stop","I2G Y35*",2
"lib1","SARS-CoV-2","GCAGGAAGCCCAATTT",8,80.84,6,-4.76,0.76,1.5,1.11,0.01,">1 nonsynonymous","P96R Y165L",2
"lib1","SARS-CoV-2","GCAGGAAGGTCAGAAC",1,73.74,7.67,-3.09,0.16,1.5,1.13,0.01,">1 nonsynonymous","N107W T201K",2
"lib1","SARS-CoV-2","GCAGGAGAAATCCAAG",3,41.67,6.53,-4.23,0.26,1.5,1.12,0.01,">1 nonsynonymous","V32S G86M D98S",3
"lib1","SARS-CoV-2","GCAGGAGTACTGACAT",17,308.52,9.7,-1.07,0.08,2.7,1.07,0,">1 nonsynonymous","A42K Y143M V180C",3
"lib1","SARS-CoV-2","GCAGGAGTCAAAAGAT",1,50.36,10.09,-0.67,0.17,2.38,1.03,0.01,">1 nonsynonymous","A14C L38M",2
"lib1","SARS-CoV-2","GCAGGAGTCCACATAC",3,57.76,10.78,0.01,0.06,2.86,1.11,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","GCAGGATGTTGCCCAA",2,45.53,9.4,-1.37,0.06,1.91,1.1,0,">1 nonsynonymous","F12C V37Y",2
"lib1","SARS-CoV-2","GCAGGCAAAATTGTGC",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29E D59S R127I",3
"lib1","SARS-CoV-2","GCAGGCATAAATAATG",8,62.09,6,-4.76,2,3,1.21,0,">1 nonsynonymous","G86W P96Y",2
"lib1","SARS-CoV-2","GCAGGCATAATGCATA",1,17.34,10.87,0.11,0.08,2.98,1,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","GCAGGCATGACTTTCA",2,0.43,NA,NA,NA,NA,NA,NA,"stop","S45K V52D G116*",3
"lib1","SARS-CoV-2","GCAGGCGAGTATATCA",1,19.56,8.07,-2.7,0.28,1.5,1.08,0.03,">1 nonsynonymous","V37K A105N Y119D S147G",4
"lib1","SARS-CoV-2","GCAGGCTACACAATCA",3,52.52,6,-4.76,1.69,1.5,1.13,0.01,">1 nonsynonymous","V20E S29R F99A",3
"lib1","SARS-CoV-2","GCAGGCTCCGGACTGG",4,5.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R S19G G51S G146Q",4
"lib1","SARS-CoV-2","GCAGGGAATGTGTTAC",9,43.89,6,-4.76,1.05,1.5,1.14,0.01,">1 nonsynonymous","C49V D68T V77L D90F N151T",5
"lib1","SARS-CoV-2","GCAGGGACCTGTCAAT",3,22.97,6,-4.76,1.81,1.5,1.27,0.03,">1 nonsynonymous","T15K G101F L122V I138S",4
"lib1","SARS-CoV-2","GCAGGGACGGAGGGCC",1,46.64,10.6,-0.16,0.05,2.88,1.05,0,">1 nonsynonymous","K87R E141M",2
"lib1","SARS-CoV-2","GCAGGGATACCACGAT",3,24.08,9.89,-0.87,0.15,2.4,1.14,0.01,">1 nonsynonymous","I2W Y91S T201L",3
"lib1","SARS-CoV-2","GCAGGGCCAAGAAGCG",5,111.81,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","F12N C61E G155P L162K Q176T",5
"lib1","SARS-CoV-2","GCAGGGTAAGAAACGT",6,30.91,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F12V F47A F99T",3
"lib1","SARS-CoV-2","GCAGGGTCAATGGTAT",3,51.44,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y35S G86M K94R V153D T201R",5
"lib1","SARS-CoV-2","GCAGGGTCTCAATATG",3,20.27,7.98,-2.78,0.24,1.5,1.16,0.02,">1 nonsynonymous","A33M D68E K128T",3
"lib1","SARS-CoV-2","GCAGGGTGACGCGAAA",9,76.56,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","Y50G Y91N",2
"lib1","SARS-CoV-2","GCAGGTAAACCATTAG",1,5.97,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","V37R N92R V115P P177S",4
"lib1","SARS-CoV-2","GCAGGTAATCGTAATG",2,57.02,6,-4.76,2,3,1.18,0,">1 nonsynonymous","P7V A42G D68R L131R Y159D",5
"lib1","SARS-CoV-2","GCAGGTAATGAAAACC",4,72.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A22F A105L V153N F156V Y175T",5
"lib1","SARS-CoV-2","GCAGGTACACACGGAG",2,8,10.66,-0.1,0.14,2.67,1.23,0.01,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","GCAGGTACCACCAATG",1,18.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5Q A67I R73F G86R D97H G101S N157L",7
"lib1","SARS-CoV-2","GCAGGTACTACTAACC",3,115.73,8.6,-2.17,0.1,2.73,1.08,0.01,">1 nonsynonymous","N24V G166Y",2
"lib1","SARS-CoV-2","GCAGGTATACAATGTG",1,12.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20G L57S V115Q",3
"lib1","SARS-CoV-2","GCAGGTATAGGATACG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V20L L60K I72V G83* A105S F156D K199N",7
"lib1","SARS-CoV-2","GCAGGTATCGAACAAA",1,20.16,7.21,-3.55,0.38,1.5,1.25,0.03,">1 nonsynonymous","L5P T85M S113M Q168T",4
"lib1","SARS-CoV-2","GCAGGTATCGAAGTTC",3,10.67,10.84,0.07,0.12,2.9,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCAGGTCAGATGGCTT",1,32.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25S G86R I138V",3
"lib1","SARS-CoV-2","GCAGGTCAGGAATCAT",9,16.73,6.95,-3.81,0.71,1.5,1.09,0.07,">1 nonsynonymous","N1Y V180N",2
"lib1","SARS-CoV-2","GCAGGTCATGGCTAAG",3,54.07,10.75,-0.01,0.07,2.98,1.03,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","GCAGGTCCTTGTTCAC",8,3.97,NA,NA,NA,NA,NA,NA,"stop","A18* Y66E I104R Y175N K198Y",5
"lib1","SARS-CoV-2","GCAGGTCGAAGCATCA",6,1.12,NA,NA,NA,NA,NA,NA,"stop","N1* N13R A33S V71*",4
"lib1","SARS-CoV-2","GCAGGTCGGGCCATCG",3,73.52,9.43,-1.33,0.11,1.92,1.12,0,">1 nonsynonymous","C61S R136E",2
"lib1","SARS-CoV-2","GCAGGTCTTGCACAAC",1,46.36,8.26,-2.5,0.2,1.84,1.11,0.02,">1 nonsynonymous","F12L V37D F167W",3
"lib1","SARS-CoV-2","GCAGGTGACGATGCCG",1,6.44,10.79,0.02,0.11,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGGTGAGATTTCAT",2,38.47,10.36,-0.4,0.06,2.74,1,0,">1 nonsynonymous","P149N Y178C",2
"lib1","SARS-CoV-2","GCAGGTGATAGAAACT",8,87.59,8.45,-2.31,0.15,1.79,1.11,0.01,">1 nonsynonymous","N4C S41L P177S",3
"lib1","SARS-CoV-2","GCAGGTGCGGCCAGAT",5,166.15,10.62,-0.14,0.04,2.94,1.04,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","GCAGGTGCGTAGTTCC",4,49.62,10.8,0.04,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGGTGGGAGTATAA",6,91.65,9.63,-1.14,0.05,2.82,1.05,0,">1 nonsynonymous","E76W G116A S129M T201F",4
"lib1","SARS-CoV-2","GCAGGTTAACAATACA",3,64.1,10.64,-0.13,0.05,2.9,1.06,0,">1 nonsynonymous","T3V K56V",2
"lib1","SARS-CoV-2","GCAGGTTTGCGTAGAC",3,128.45,10.7,-0.06,0.08,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GCAGTAAAAAACTATA",1,84.67,8.72,-2.04,0.12,1.62,1.12,0.01,">1 nonsynonymous","A18W G146R S184M",3
"lib1","SARS-CoV-2","GCAGTAAATAAAATAC",2,26.49,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54D Y66S D97N E141Y G166L",5
"lib1","SARS-CoV-2","GCAGTAAGCGACCACT",9,168.82,10.79,0.03,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGTAAGTAGTTGGT",7,56.36,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K114R F167P",2
"lib1","SARS-CoV-2","GCAGTAATACTGAACA",2,20.09,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K56L C158P R179I",3
"lib1","SARS-CoV-2","GCAGTAATATAGGTGA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","K94* L122* T170L",3
"lib1","SARS-CoV-2","GCAGTAATGTGGTAAG",2,12.12,6.08,-4.68,0.91,1.5,1.09,0.03,">1 nonsynonymous","E10R C158G",2
"lib1","SARS-CoV-2","GCAGTACAACACTCAG",4,56.65,9.87,-0.89,0.13,2.2,1.03,0.01,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","GCAGTACAGCCACCCA",2,1.74,NA,NA,NA,NA,NA,NA,"stop","P7F C61L E141*",3
"lib1","SARS-CoV-2","GCAGTACGTATAAATA",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102K Y119A",2
"lib1","SARS-CoV-2","GCAGTACTAACCTATG",4,1.87,NA,NA,NA,NA,NA,NA,"stop","Y91T S113V Y119* N130I C158G",5
"lib1","SARS-CoV-2","GCAGTACTAAGTTAGC",7,104.88,10.15,-0.61,0.07,2.75,1.03,0,">1 nonsynonymous","T3K Y21M P54I",3
"lib1","SARS-CoV-2","GCAGTACTTTCTAAGT",2,55.41,10.17,-0.6,0.06,2.88,1,0,">1 nonsynonymous","V11F C61D",2
"lib1","SARS-CoV-2","GCAGTAGAAAACGACC",3,28.03,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44V N157F Y165H",3
"lib1","SARS-CoV-2","GCAGTAGTAAGTGATA",1,36.15,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W23L K56E K94V F99A T140D G155H T201G",7
"lib1","SARS-CoV-2","GCAGTAGTACTTGTTT",3,4.35,NA,NA,NA,NA,NA,NA,"stop","V37N L60V F99* Y143L G155W P169L",6
"lib1","SARS-CoV-2","GCAGTAGTTTCAAGAT",2,7.6,6.01,-4.76,0.54,1.5,1.03,0,">1 nonsynonymous","F62L V71R",2
"lib1","SARS-CoV-2","GCAGTATAAGCTTACA",2,49.91,8.28,-2.48,0.2,2.2,1.13,0.02,">1 nonsynonymous","Y119C G152V",2
"lib1","SARS-CoV-2","GCAGTATATACTAATG",1,14.17,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","K94I G146K V173A",3
"lib1","SARS-CoV-2","GCAGTATGAATTCCAT",3,139.04,8.33,-2.44,0.13,2.73,1.09,0.01,">1 nonsynonymous","F44N S139D F160V G174D P197R",5
"lib1","SARS-CoV-2","GCAGTATGTAAAACTT",4,4.99,NA,NA,NA,NA,NA,NA,"stop","E10* K87N L95V",3
"lib1","SARS-CoV-2","GCAGTATTTAGCTGAT",5,104.84,10.47,-0.29,0.05,2.89,1.01,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","GCAGTATTTGAGAATA",7,55.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R D98V L162G",3
"lib1","SARS-CoV-2","GCAGTCAACAGTCGCG",4,47.98,6,-4.76,2,3,1.22,0,">1 nonsynonymous","K87N N92P I104Y T148N L162R Q176K",6
"lib1","SARS-CoV-2","GCAGTCAAGAACCGTT",3,15.69,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V20C K48M N107S S200W",4
"lib1","SARS-CoV-2","GCAGTCACTACTTAAG",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I K87N L122K R127C E135L I142W T170N",7
"lib1","SARS-CoV-2","GCAGTCATACGTTTAT",9,82.3,10.81,0.04,0.1,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGTCATGCAAATAA",2,0.42,NA,NA,NA,NA,NA,NA,"stop","S29* V37* V181P",3
"lib1","SARS-CoV-2","GCAGTCGACAATGTAG",18,270.49,8.32,-2.45,0.11,2.5,1.1,0,">1 nonsynonymous","V32S K87W G117R",3
"lib1","SARS-CoV-2","GCAGTCGCAGCATCCT",3,9.2,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A14S L38A V77L P177A R179L",5
"lib1","SARS-CoV-2","GCAGTCGGCGTACATT",4,148.36,10.52,-0.25,0.04,2.91,1,0,"1 nonsynonymous","V71L",1
"lib1","SARS-CoV-2","GCAGTCGTTACAAAAA",7,80.65,6,-4.76,2,2.68,1.16,0,">1 nonsynonymous","C6G L60S N107V C150L",4
"lib1","SARS-CoV-2","GCAGTCGTTACAAAAG",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G L60S N107V C150L",4
"lib1","SARS-CoV-2","GCAGTCTGATTGTTAA",5,27,9.93,-0.84,0.28,1.74,1,0.03,">1 nonsynonymous","L60M D90N P96A E141Q S164W",5
"lib1","SARS-CoV-2","GCAGTCTTGTCGAGCT",2,11.18,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y39N D68I F167V K198T T201R",5
"lib1","SARS-CoV-2","GCAGTCTTTGAGATCC",1,12.28,6,-4.76,2,1.5,1.09,0.04,"1 nonsynonymous","G101P",1
"lib1","SARS-CoV-2","GCAGTCTTTGCTACCG",1,17.27,9.41,-1.36,0.2,2.33,1.13,0.02,">1 nonsynonymous","S139I G174M",2
"lib1","SARS-CoV-2","GCAGTGAAAATTACTA",6,42.28,6.03,-4.73,1.14,1.5,1.2,0.02,">1 nonsynonymous","S19M I88Y E135V",3
"lib1","SARS-CoV-2","GCAGTGAAGGATAGGC",5,57.59,6.4,-4.37,0.42,1.5,1.09,0.01,">1 nonsynonymous","P7V E135M Q163S P177L",4
"lib1","SARS-CoV-2","GCAGTGATCTGTCACT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","N120L Q163L S200*",3
"lib1","SARS-CoV-2","GCAGTGATGAAGGGCT",4,7.28,6.25,-4.51,2,1.5,1.04,0,">1 nonsynonymous","I2A P7T N40S K94E",4
"lib1","SARS-CoV-2","GCAGTGCAGAACCCAC",5,98.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11F V37G K56V T140Q C158N K198T",6
"lib1","SARS-CoV-2","GCAGTGCCATATCTAC",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I S36L Y93N D137S H189S",5
"lib1","SARS-CoV-2","GCAGTGGGGTTCTCAA",1,33.5,10.76,0,0.09,2.88,1.08,0,"1 nonsynonymous","T3D",1
"lib1","SARS-CoV-2","GCAGTGGTCAGTACTA",1,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","GCAGTGTAGAAACACA",3,37.21,6.68,-4.08,0.78,1.5,1.3,0.04,">1 nonsynonymous","S45M Q79R D97I Q163G S200N",5
"lib1","SARS-CoV-2","GCAGTGTGAGGAAATC",5,21.47,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","E141S R179G",2
"lib1","SARS-CoV-2","GCAGTTAATTTGTGCT",10,118.87,10.77,0,0.08,2.94,1.02,0,"1 nonsynonymous","S43H",1
"lib1","SARS-CoV-2","GCAGTTAATTTTTCTT",10,242.57,10.54,-0.23,0.04,2.94,1.02,0,">1 nonsynonymous","F17W K87L",2
"lib1","SARS-CoV-2","GCAGTTACAGTAAGTA",4,47.55,10.16,-0.6,0.05,2.94,1.05,0,">1 nonsynonymous","N40K G116H P149S G196R",4
"lib1","SARS-CoV-2","GCAGTTACATTGAAAC",4,13.27,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","G86P Y119A E141A T201Y",4
"lib1","SARS-CoV-2","GCAGTTACTTGCATAA",3,51.31,9.77,-1,0.11,2.22,1.05,0.01,">1 nonsynonymous","N30L D34C P149R",3
"lib1","SARS-CoV-2","GCAGTTATACGAAATG",6,82.39,10.88,0.11,0.06,2.94,1.02,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","GCAGTTATGAAATGAC",10,3.13,NA,NA,NA,NA,NA,NA,"stop","N13S N40* Y175N P197C",4
"lib1","SARS-CoV-2","GCAGTTATTTCAAAAA",8,2.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","GCAGTTCAACACAACC",5,34.76,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C31F V103A",2
"lib1","SARS-CoV-2","GCAGTTCCGGTGAACC",11,83.18,10.09,-0.67,0.09,2.6,1.01,0,">1 nonsynonymous","K56L N107G",2
"lib1","SARS-CoV-2","GCAGTTGAAACGACAT",3,12.13,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S69L G86H W106M",3
"lib1","SARS-CoV-2","GCAGTTGCTTTAGGAT",6,44.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62I A81V Y119C I138R F185N",5
"lib1","SARS-CoV-2","GCAGTTGGTACGCAAA",6,215.52,10.8,0.03,0.07,2.88,1.07,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","GCAGTTGTCTTTTTGC",11,130.96,10.81,0.05,0.07,2.96,1.02,0,">1 nonsynonymous","I2D T201W",2
"lib1","SARS-CoV-2","GCAGTTTAATGTGCGC",1,10.54,10.93,0.17,0.17,2.91,1,0.01,"1 nonsynonymous","E141T",1
"lib1","SARS-CoV-2","GCAGTTTTAAGATACA",3,28.05,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","D112N V181L",2
"lib1","SARS-CoV-2","GCAGTTTTGAGAAACG",4,140.44,10.78,0.01,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCAGTTTTTCGATATT",1,69.31,10.68,-0.09,0.04,2.95,1.02,0,"1 nonsynonymous","Q163I",1
"lib1","SARS-CoV-2","GCATAAAAACACCCGA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","E10* L122E F160I P197E",4
"lib1","SARS-CoV-2","GCATAAAAACACTCAC",6,22.15,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S19F G83R N92I Y119V N130M Q144T",6
"lib1","SARS-CoV-2","GCATAAAAACCTAAGA",2,97.41,10.51,-0.25,0.05,2.9,1.05,0,">1 nonsynonymous","S29P I142V",2
"lib1","SARS-CoV-2","GCATAAAACTCGAAGG",5,90.51,10.3,-0.46,0.02,2.89,1.01,0,"1 nonsynonymous","N107P",1
"lib1","SARS-CoV-2","GCATAAAAGCAAGCCA",7,79.9,10.73,-0.04,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATAAAAGCTAACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90V T140W K199*",3
"lib1","SARS-CoV-2","GCATAAAATCCAAGAT",2,19.28,6,-4.76,1.72,1.5,1.32,0.06,">1 nonsynonymous","T3S S43E V103R",3
"lib1","SARS-CoV-2","GCATAAAATTAACGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K56W R73M A89* C150M G174Q",5
"lib1","SARS-CoV-2","GCATAAACAAACAGTT",9,52.32,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V37I T100N L131H",3
"lib1","SARS-CoV-2","GCATAAACAATATCCT",1,20.01,10.42,-0.34,0.07,2.89,1.06,0,">1 nonsynonymous","G9Q T15K A33R Q168H",4
"lib1","SARS-CoV-2","GCATAAACAGACTATA",2,36.56,9.69,-1.07,0.06,2.95,1.03,0,"1 nonsynonymous","T170N",1
"lib1","SARS-CoV-2","GCATAAACATTCGGCG",8,166.12,10.18,-0.58,0.05,2.76,1.05,0,">1 nonsynonymous","N4G N64C K87Y D98T S184Y",5
"lib1","SARS-CoV-2","GCATAAACCATTGAAC",4,1.66,NA,NA,NA,NA,NA,NA,"stop","S108* P133T R136I E141P",4
"lib1","SARS-CoV-2","GCATAAAGGACATACA",4,125.23,9.77,-0.99,0.12,1.8,1.09,0,">1 nonsynonymous","L38K D97K",2
"lib1","SARS-CoV-2","GCATAAAGGGTAAAAA",1,26.73,9.67,-1.1,0.19,1.99,1.05,0.01,">1 nonsynonymous","T3I A22D K56W T140A",4
"lib1","SARS-CoV-2","GCATAAATAAGCCTCA",4,44.84,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N1A N58S D112F F134M",4
"lib1","SARS-CoV-2","GCATAAATAGAAACAA",2,66.62,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S43D P82W Q176M",3
"lib1","SARS-CoV-2","GCATAAATCTGACAAA",1,1.84,NA,NA,NA,NA,NA,NA,"stop","D90Y T100*",2
"lib1","SARS-CoV-2","GCATAAATTGCAATGA",1,96.12,10.19,-0.57,0.04,2.92,1,0,">1 nonsynonymous","V37H R78Y G166N P197I",4
"lib1","SARS-CoV-2","GCATAAATTTCGTGGA",4,96.67,10.6,-0.16,0.04,2.89,1.03,0,"1 nonsynonymous","F160I",1
"lib1","SARS-CoV-2","GCATAACCCATTAAAA",5,35.51,8.7,-2.07,0.32,1.5,1.09,0.05,">1 nonsynonymous","W106G E141A",2
"lib1","SARS-CoV-2","GCATAACCGCAAGAAA",8,80.42,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F12T T63Y D90S P96Q Y119I G174Q",6
"lib1","SARS-CoV-2","GCATAACCTTGCACCA",1,16.07,9.6,-1.16,0.11,2.7,1.07,0,">1 nonsynonymous","N1D G146R",2
"lib1","SARS-CoV-2","GCATAACGGAACTCTC",10,12.33,7.78,-2.98,0.36,1.54,1.09,0.04,">1 nonsynonymous","T15K P54F D97C S184P",4
"lib1","SARS-CoV-2","GCATAACTAAGAAACA",2,41.82,10.08,-0.68,0.08,2.71,1.01,0,">1 nonsynonymous","G51S F134M",2
"lib1","SARS-CoV-2","GCATAACTGCTCGCGT",2,40.19,9.28,-1.49,0.2,2.32,1.15,0.01,"1 nonsynonymous","Y165I",1
"lib1","SARS-CoV-2","GCATAACTTTTACACA",4,94.01,9.95,-0.81,0.08,2.58,1.04,0,">1 nonsynonymous","T55I Y178I",2
"lib1","SARS-CoV-2","GCATAAGATATTCACG",5,33.56,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L95S W106R G117R",3
"lib1","SARS-CoV-2","GCATAAGCACTCTACT",2,97.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63H G83E Y159S G174S",4
"lib1","SARS-CoV-2","GCATAAGCAGAAACAA",3,69.29,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G74V L131I Q176Y K199S",4
"lib1","SARS-CoV-2","GCATAAGCCGGCTTTC",4,69.4,10.27,-0.49,0.07,2.73,1.05,0,">1 nonsynonymous","D90K S129W",2
"lib1","SARS-CoV-2","GCATAAGCCTCTAAAA",4,52.72,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D34L N107F",2
"lib1","SARS-CoV-2","GCATAAGCTGCGCATC",3,55.58,9.58,-1.18,0.06,2.85,1.09,0,">1 nonsynonymous","G83M N118Y",2
"lib1","SARS-CoV-2","GCATAAGGATTAAGAC",9,93.28,6.35,-4.41,0.52,1.5,1.16,0.02,">1 nonsynonymous","S36I T55W N120F G146T N151V",5
"lib1","SARS-CoV-2","GCATAAGGATTGAGGA",1,27.05,10.78,0.02,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATAAGTTAGTTTTA",13,59.89,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","A33R S41G N110T D137A",4
"lib1","SARS-CoV-2","GCATAATAAATTCTCC",1,40.92,10.14,-0.63,0.09,2.68,1.05,0,"1 nonsynonymous","L131C",1
"lib1","SARS-CoV-2","GCATAATACTTAAGAG",3,48.53,10.81,0.04,0.08,2.94,1.03,0,">1 nonsynonymous","S43P T148S",2
"lib1","SARS-CoV-2","GCATAATCAGACCTCT",6,123.44,10.68,-0.08,0.06,2.93,1.03,0,">1 nonsynonymous","T63G F134W",2
"lib1","SARS-CoV-2","GCATAATCGAACGCAA",5,34.16,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","W106V F167T",2
"lib1","SARS-CoV-2","GCATAATGCGACGAGA",9,103.48,10.67,-0.1,0.07,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATAATTCATCTTAT",1,5.96,6.05,-4.71,0.95,3,1,0.02,">1 nonsynonymous","N4M Y21S C61P F99G W106L",5
"lib1","SARS-CoV-2","GCATAATTGCAAATAC",1,0.61,NA,NA,NA,NA,NA,NA,"stop","V115* T140Y",2
"lib1","SARS-CoV-2","GCATAATTGTTACGGT",4,42.13,7.13,-3.63,0.46,1.5,1.19,0.06,">1 nonsynonymous","T3A F17G G74V Y121M K128P N157Y",6
"lib1","SARS-CoV-2","GCATAATTTTCAGTCA",4,78.07,10.9,0.13,0.06,2.94,1,0,">1 nonsynonymous","D97I S147N",2
"lib1","SARS-CoV-2","GCATAATTTTGTAGTA",16,16.94,6.64,-4.12,0.66,1.5,1.23,0.08,">1 nonsynonymous","C102N V180N K199R",3
"lib1","SARS-CoV-2","GCATACAAAACTAACC",5,41.82,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","F99D N120A R136Y F160H",4
"lib1","SARS-CoV-2","GCATACAACGTTGTCG",1,6.34,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","S19A F99N",2
"lib1","SARS-CoV-2","GCATACAATATTCGTA",1,7.97,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","V11L G86R S184E",3
"lib1","SARS-CoV-2","GCATACAATTTTTTGA",16,246.67,10.7,-0.07,0.04,2.85,1.06,0,">1 nonsynonymous","G196C K198N",2
"lib1","SARS-CoV-2","GCATACACATTTTCCT",10,5.17,10.19,-0.58,0.15,2.47,1,0.01,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","GCATACACGTTGCAAA",3,57.42,10.77,0,0.09,2.85,1.09,0,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","GCATACACTGTGTGCT",6,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F N151D",2
"lib1","SARS-CoV-2","GCATACAGGTGAGACA",1,21.89,10.98,0.21,0.1,2.87,1.09,0,">1 nonsynonymous","V37W S43Q",2
"lib1","SARS-CoV-2","GCATACATCATTACAA",1,47.08,10.26,-0.5,0.05,2.89,1.03,0,">1 nonsynonymous","S41D F62L K87I P149R",4
"lib1","SARS-CoV-2","GCATACATCCTCCACG",12,167.19,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5R L57S P82M T170A Y175T",5
"lib1","SARS-CoV-2","GCATACCACAAAAGCC",4,2.79,NA,NA,NA,NA,NA,NA,"stop","S43C L60* A81S G146L",4
"lib1","SARS-CoV-2","GCATACCATATAGTAA",1,21.27,10.82,0.05,0.11,2.87,1.08,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","GCATACCATGACGTCT",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T H189I T201Y",3
"lib1","SARS-CoV-2","GCATACCGAAATCGAG",3,15.88,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S19W A105G C195W",3
"lib1","SARS-CoV-2","GCATACCGACAAACTA",4,33.54,7.61,-3.16,0.35,1.5,1.04,0.04,">1 nonsynonymous","G9S P96R E141C V173H",4
"lib1","SARS-CoV-2","GCATACGTCAGCAAAT",5,2.6,NA,NA,NA,NA,NA,NA,"stop","G9* I142F",2
"lib1","SARS-CoV-2","GCATACGTTAGGGGCA",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I T170L",2
"lib1","SARS-CoV-2","GCATACGTTGAAACAC",2,60.93,9.62,-1.15,0.05,2.85,1.08,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","GCATACTCGTTCGAAC",5,17.21,10.51,-0.26,0.18,2.78,1.01,0.01,">1 nonsynonymous","Y123R S129V",2
"lib1","SARS-CoV-2","GCATACTCTGGTGTAT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","G9N F99L N118K T148*",4
"lib1","SARS-CoV-2","GCATACTGCAACCTCT",4,56.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35P D59W L95N",3
"lib1","SARS-CoV-2","GCATAGAAGAATAATG",8,99.89,8.62,-2.15,0.1,2.79,1.11,0,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","GCATAGAAGTGATCCT",3,49.56,10.6,-0.17,0.23,2.32,1.02,0.03,"1 nonsynonymous","I80L",1
"lib1","SARS-CoV-2","GCATAGACTCCTCACT",11,90.72,10.75,-0.02,0.05,2.91,1.03,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","GCATAGAGGCTGGAAT",1,17.19,8.44,-2.33,0.17,2.54,1.04,0.01,"1 nonsynonymous","P161D",1
"lib1","SARS-CoV-2","GCATAGATACTCCCTA",4,66.65,9.56,-1.2,0.11,2.54,1.09,0,">1 nonsynonymous","I142C F185L",2
"lib1","SARS-CoV-2","GCATAGATCCAAAGTG",6,96.62,10.64,-0.12,0.06,2.93,1,0,">1 nonsynonymous","L60A E141K",2
"lib1","SARS-CoV-2","GCATAGATTGTATGAA",3,12.27,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I104R S129G",2
"lib1","SARS-CoV-2","GCATAGCACAGCCTGA",10,209.93,10.53,-0.24,0.04,2.85,1.06,0,">1 nonsynonymous","S41F P54T",2
"lib1","SARS-CoV-2","GCATAGCCATTTACCT",5,2.59,NA,NA,NA,NA,NA,NA,"stop","E10* D59M G146T G152I",4
"lib1","SARS-CoV-2","GCATAGCCTAACTGCC",1,42.14,8.96,-1.81,0.24,1.5,1,0.03,">1 nonsynonymous","I28K N64F",2
"lib1","SARS-CoV-2","GCATAGCCTCCGATGC",2,30.47,10.77,0.01,0.07,2.91,1.09,0,"1 nonsynonymous","T55F",1
"lib1","SARS-CoV-2","GCATAGGAAAAACTAA",3,5.88,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6K K48A D90R Y121I K132W A145S P149A",7
"lib1","SARS-CoV-2","GCATAGGCCCGTAGAA",2,1276.51,8.29,-2.47,0.14,1.81,1.09,0.01,">1 nonsynonymous","N107I Y175F",2
"lib1","SARS-CoV-2","GCATAGGGACCCTGCG",1,62.63,6.65,-4.12,0.31,1.5,1.16,0.01,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","GCATAGGGTAATATCA",5,21.4,10.76,-0.01,0.1,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATAGGTAAGCACAA",1,14.69,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D68G D98F",2
"lib1","SARS-CoV-2","GCATAGGTACAGAAAT",1,36.92,8.24,-2.53,0.37,1.5,1,0.04,">1 nonsynonymous","T3G K48W S139I",3
"lib1","SARS-CoV-2","GCATAGGTTAACTTCA",2,42.2,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A22P P169N",2
"lib1","SARS-CoV-2","GCATAGTACTAAAACA",2,25.56,6,-4.76,2,1.5,1.49,0.05,">1 nonsynonymous","A89R D97R",2
"lib1","SARS-CoV-2","GCATAGTATTCACGAG",12,115.18,10.08,-0.68,0.08,2.43,1.05,0,">1 nonsynonymous","F12V R27M E141S",3
"lib1","SARS-CoV-2","GCATAGTGCAAAGACG",9,145.17,10.66,-0.11,0.03,2.93,1.03,0,">1 nonsynonymous","N58K S129N P149N",3
"lib1","SARS-CoV-2","GCATAGTTAGCGCCTG",2,9.68,10.66,-0.11,0.07,3,1,0,">1 nonsynonymous","N64Y K87R T193R",3
"lib1","SARS-CoV-2","GCATAGTTTAAGTTTA",5,44.52,8.99,-1.78,0.15,1.5,1.16,0.01,">1 nonsynonymous","F12I Q84D",2
"lib1","SARS-CoV-2","GCATATAACTTATTAC",1,89.64,10.27,-0.49,0.05,2.86,1.03,0,">1 nonsynonymous","P54G I142T",2
"lib1","SARS-CoV-2","GCATATAAGAATTCAT",8,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K S113L N120L",3
"lib1","SARS-CoV-2","GCATATAAGCTAGTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","D90P F160R G172*",3
"lib1","SARS-CoV-2","GCATATAATAACTCTG",6,68.03,10.62,-0.14,0.06,2.91,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATATAATGTGCTAA",6,33.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102D P149H",2
"lib1","SARS-CoV-2","GCATATACAAAAACTA",6,1.33,NA,NA,NA,NA,NA,NA,"stop","P96S C102W N107* I142H",4
"lib1","SARS-CoV-2","GCATATACTGAAAAGT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","GCATATACTTTTGAAA",2,38.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T15D R25D Y50P R127H G166I",5
"lib1","SARS-CoV-2","GCATATATGTAACGTG",1,14.33,9.99,-0.77,0.1,2.89,1.05,0,">1 nonsynonymous","N107S T201A",2
"lib1","SARS-CoV-2","GCATATCAACATTTCA",3,52.47,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D90I C150T",2
"lib1","SARS-CoV-2","GCATATCAATTAAATT",3,32.74,9.82,-0.95,0.13,2.57,1.09,0.01,">1 nonsynonymous","Y39S D90G",2
"lib1","SARS-CoV-2","GCATATCCTTGAGCTT",3,64.6,10.81,0.05,0.07,2.92,1.05,0,">1 nonsynonymous","D59N N110K A192W",3
"lib1","SARS-CoV-2","GCATATCTACCTAAGC",6,137.57,10.71,-0.05,0.05,2.92,1.03,0,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","GCATATCTTACATTCA",2,19.35,10.52,-0.24,0.05,2.95,1.01,0,">1 nonsynonymous","S43F Y178T",2
"lib1","SARS-CoV-2","GCATATCTTCGCTAAG",5,72.48,9.6,-1.17,0.1,1.79,1.1,0,">1 nonsynonymous","Y35S A81V F160R",3
"lib1","SARS-CoV-2","GCATATGAAAGGAGAC",4,1.44,NA,NA,NA,NA,NA,NA,"stop","Y35W S43L N92F K128* G155L G172T",6
"lib1","SARS-CoV-2","GCATATGAACTCGTTT",3,62.21,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12S G74D",2
"lib1","SARS-CoV-2","GCATATGAATCACAGA",4,1.31,NA,NA,NA,NA,NA,NA,"stop","P82F G101* A105I K128G",4
"lib1","SARS-CoV-2","GCATATGACAGAATTA",4,41.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19R I88D W106R C150N",4
"lib1","SARS-CoV-2","GCATATGACGGTGGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I G172D",2
"lib1","SARS-CoV-2","GCATATGACTATTGAT",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93A S139G",2
"lib1","SARS-CoV-2","GCATATGATCAAACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* A33N T100S V173R",4
"lib1","SARS-CoV-2","GCATATGGGACCCCTT",4,1.24,NA,NA,NA,NA,NA,NA,"stop","I138* L188V",2
"lib1","SARS-CoV-2","GCATATGGGCATAACT",7,75.5,6,-4.76,1.74,1.5,1.25,0.02,">1 nonsynonymous","V32W S43T P54T G83S K132I V173S L183V",7
"lib1","SARS-CoV-2","GCATATGTTAATATGG",1,20.94,9.94,-0.82,0.05,2.88,1,0,">1 nonsynonymous","E10L T55L L111K G174M",4
"lib1","SARS-CoV-2","GCATATTAAAGTGGTA",5,0,NA,NA,NA,NA,NA,NA,"stop","A14S F167* H189R",3
"lib1","SARS-CoV-2","GCATATTAACGTTAAG",5,43.19,9.72,-1.04,0.1,1.89,1.04,0,">1 nonsynonymous","C49V S139T T148C Q168Y",4
"lib1","SARS-CoV-2","GCATATTAACTGACGT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCATATTAATAACAAA",2,29.66,6.99,-3.78,0.37,1.5,1.2,0.02,">1 nonsynonymous","A18F D90V D98R",3
"lib1","SARS-CoV-2","GCATATTACCCTATAT",3,49.21,9.99,-0.77,0.04,2.69,1.03,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GCATATTATTCATGAT",10,103.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D137P F167K",2
"lib1","SARS-CoV-2","GCATATTCATTTGACC",2,150.78,10.68,-0.08,0.05,2.87,1.08,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","GCATATTGTGTTCAGA",6,44.5,6.31,-4.45,0.45,1.5,1.15,0.01,">1 nonsynonymous","G51K G86Y G155A",3
"lib1","SARS-CoV-2","GCATATTTACAAGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* E135M",2
"lib1","SARS-CoV-2","GCATATTTCAGATTTA",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81D F99K V182Q",3
"lib1","SARS-CoV-2","GCATATTTCGCGACCA",1,5.81,10.75,-0.02,0.11,2.91,1.03,0,">1 nonsynonymous","G9P V153S Q168F",3
"lib1","SARS-CoV-2","GCATATTTTACTATTT",2,18.49,6.37,-4.4,0.62,1.5,1.22,0.02,">1 nonsynonymous","N24H Y121F L131Q T148V",4
"lib1","SARS-CoV-2","GCATATTTTATTAAGT",2,55.32,7.59,-3.17,0.18,1.65,1.09,0.01,">1 nonsynonymous","F126N T170H",2
"lib1","SARS-CoV-2","GCATCAAACAAGCATA",2,86.25,9.86,-0.91,0.09,2.58,1,0,">1 nonsynonymous","Y35G E135G",2
"lib1","SARS-CoV-2","GCATCAAACGATAAAT",6,90.66,6.45,-4.31,0.63,1.5,1.22,0.05,">1 nonsynonymous","T15N Y50I N120G F160R Q176P L188W",6
"lib1","SARS-CoV-2","GCATCAAAGGCTATTG",4,0.91,NA,NA,NA,NA,NA,NA,"stop","C49S C61M K94* V103A T201S",5
"lib1","SARS-CoV-2","GCATCAACACAAAAGC",4,47.18,6,-4.76,1.35,1.5,1.11,0.01,">1 nonsynonymous","G155T F167G R179V",3
"lib1","SARS-CoV-2","GCATCAACTAAAAGAA",2,60.31,7.68,-3.08,0.24,1.5,1.11,0.02,">1 nonsynonymous","V65Q D98R Y119D",3
"lib1","SARS-CoV-2","GCATCAAGATAGGGAA",9,0.72,NA,NA,NA,NA,NA,NA,"stop","V37* L95G S108W K198T",4
"lib1","SARS-CoV-2","GCATCAAGATGTCAAA",6,90.51,10.76,-0.01,0.07,2.88,1.07,0,"1 nonsynonymous","R27A",1
"lib1","SARS-CoV-2","GCATCAATACACCCTG",1,2.87,NA,NA,NA,NA,NA,NA,"stop","D75E L95K P161*",3
"lib1","SARS-CoV-2","GCATCAATAGAGTAGG",3,0.26,NA,NA,NA,NA,NA,NA,"stop","S19* Y35L S45G N120Q",4
"lib1","SARS-CoV-2","GCATCACACAATCTTG",3,36.54,6,-4.76,2,3,1.23,0,">1 nonsynonymous","Y35S T63M I88L G116M T148S N157T T170A",7
"lib1","SARS-CoV-2","GCATCACACACACAAA",2,2.44,NA,NA,NA,NA,NA,NA,"stop","C6* N64H G146D G152A R179F",5
"lib1","SARS-CoV-2","GCATCACCATCCACAG",4,18.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103F S164A P197Q",3
"lib1","SARS-CoV-2","GCATCACCCACCCAGG",2,38.44,10.31,-0.46,0.09,2.7,1.07,0,">1 nonsynonymous","N1H A18V",2
"lib1","SARS-CoV-2","GCATCACGAGTACTTA",4,16.49,10.19,-0.58,0.16,2.67,1,0.01,">1 nonsynonymous","P96A N120L",2
"lib1","SARS-CoV-2","GCATCACGTACAACTA",7,101.47,10.17,-0.59,0.06,2.77,1.03,0,">1 nonsynonymous","S36V F44W P96S L122Q N151I G155S",6
"lib1","SARS-CoV-2","GCATCACTCAGACTTA",9,32.24,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49N K56Q Y121G F134L Y143F",5
"lib1","SARS-CoV-2","GCATCACTTAACTTTA",13,68.51,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68W A89L N157G",3
"lib1","SARS-CoV-2","GCATCACTTATTTAGA",7,33.71,6.46,-4.31,0.43,1.5,1.03,0.02,">1 nonsynonymous","A18W K87N D137R T148Y",4
"lib1","SARS-CoV-2","GCATCAGAAACCGGCT",1,8.05,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","L5W A42C V52F D59P E76Y R124Q P133A G146F G152L Y165R",10
"lib1","SARS-CoV-2","GCATCAGAATAACTTT",18,300.44,10.71,-0.05,0.05,2.87,1.05,0,"1 nonsynonymous","K132L",1
"lib1","SARS-CoV-2","GCATCAGGACAGCTCT",2,47.48,10.14,-0.62,0.05,2.95,1,0,">1 nonsynonymous","A14D V153T Q163S K199L",4
"lib1","SARS-CoV-2","GCATCAGGTATACTGT",9,11.58,6,-4.76,1.81,1.5,1.22,0.02,">1 nonsynonymous","S43T P82I D90N V103N T148N",5
"lib1","SARS-CoV-2","GCATCAGTCACATTGC",8,57.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R25Q G74D",2
"lib1","SARS-CoV-2","GCATCATAGACGACGG",2,22.68,6.44,-4.32,0.83,1.5,1.23,0.05,">1 nonsynonymous","D98E Y121D",2
"lib1","SARS-CoV-2","GCATCATATCATCCCA",1,17.35,7.7,-3.06,0.42,1.5,1.05,0.08,">1 nonsynonymous","N1E V103I V181W",3
"lib1","SARS-CoV-2","GCATCATATGATAGGC",2,12.78,6,-4.76,2,1.5,1.19,0.03,"1 nonsynonymous","C49N",1
"lib1","SARS-CoV-2","GCATCATCCAACACTT",7,36.77,8.57,-2.2,0.22,2.18,1.12,0.02,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","GCATCATGATTTACTT",4,93.07,10.6,-0.17,0.04,2.89,1.02,0,">1 nonsynonymous","I142V Q168S",2
"lib1","SARS-CoV-2","GCATCATTAAATATCA",3,95.4,8.48,-2.28,0.11,2.67,1.09,0,">1 nonsynonymous","S43G Y175M",2
"lib1","SARS-CoV-2","GCATCATTACATGACG",12,43.73,6.15,-4.61,0.53,1.5,1.15,0.01,">1 nonsynonymous","G9I T15V Y93I D97N T140S T148V",6
"lib1","SARS-CoV-2","GCATCCAAAAGTAGAT",5,0.46,NA,NA,NA,NA,NA,NA,"stop","G51L G83D A89* T201K",4
"lib1","SARS-CoV-2","GCATCCATATCATATC",6,51.46,9.9,-0.87,0.1,2.07,1.03,0,"1 nonsynonymous","E76K",1
"lib1","SARS-CoV-2","GCATCCCACCAATCGT",2,27.18,8.19,-2.57,0.31,1.5,1.02,0.03,">1 nonsynonymous","K94V Y123T",2
"lib1","SARS-CoV-2","GCATCCCCACCTAAGA",3,16.02,9.73,-1.03,0.13,2.51,1.12,0.01,">1 nonsynonymous","L5P C31G K48D",3
"lib1","SARS-CoV-2","GCATCCCCTACAAATC",2,0.28,NA,NA,NA,NA,NA,NA,"stop","F12L W23M S41* K48V A81T R127C A190G",7
"lib1","SARS-CoV-2","GCATCCCTAGTCATTA",5,98.08,10.34,-0.42,0.09,2.56,1.01,0,">1 nonsynonymous","Y39V N120H R127S S147P F160K",5
"lib1","SARS-CoV-2","GCATCCCTTAGAATAA",5,22.29,7.65,-3.12,0.23,1.5,1.09,0.02,">1 nonsynonymous","G9A E10K K94C F134H T148M",5
"lib1","SARS-CoV-2","GCATCCGGGAACACAA",5,1.25,NA,NA,NA,NA,NA,NA,"stop","I2V V103N E141*",3
"lib1","SARS-CoV-2","GCATCCGTATCGTGCT",2,26.3,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C49R I72H",2
"lib1","SARS-CoV-2","GCATCCTGACAAATAG",17,276.02,10.64,-0.12,0.05,2.87,1.07,0,">1 nonsynonymous","N64T D97F",2
"lib1","SARS-CoV-2","GCATCCTGTTAGTCTC",1,19.25,9.97,-0.8,0.16,1.94,1.07,0.01,">1 nonsynonymous","W106K F126V S200F",3
"lib1","SARS-CoV-2","GCATCGAACCCACGAA",2,7.82,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","P96L W106Y Y123R G155S L183K",5
"lib1","SARS-CoV-2","GCATCGAATACAGAAG",1,41.62,10.81,0.05,0.06,2.98,1.03,0,"1 nonsynonymous","N110K",1
"lib1","SARS-CoV-2","GCATCGAATTTCCAAA",3,27.23,6.14,-4.62,0.79,1.5,1.17,0.01,">1 nonsynonymous","V11T P54L G86A E141A N157S",5
"lib1","SARS-CoV-2","GCATCGACATTAATCA",8,82.31,6.11,-4.65,0.59,1.5,1.17,0.01,">1 nonsynonymous","E10Y Y50F D112P R124Q",4
"lib1","SARS-CoV-2","GCATCGATTCCCCATC",3,50.13,9.66,-1.1,0.13,1.97,1.06,0.01,"1 nonsynonymous","F8N",1
"lib1","SARS-CoV-2","GCATCGCACCTTAAAG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","G9D K56E E141* P149Q",4
"lib1","SARS-CoV-2","GCATCGGGACCTCGAA",4,80.71,10.75,-0.02,0.08,2.89,1.08,0,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","GCATCTAAAACCAGGA",8,111.36,9.79,-0.98,0.07,2,1.06,0,">1 nonsynonymous","P7S A14L E141I",3
"lib1","SARS-CoV-2","GCATCTAAGAGACGAC",1,41.45,10.4,-0.37,0.05,2.86,1.04,0,">1 nonsynonymous","R27P T63V",2
"lib1","SARS-CoV-2","GCATCTACAACCCCTG",2,21.92,10.2,-0.57,0.11,2.84,1.1,0,">1 nonsynonymous","V37F K94L L122S G174A",4
"lib1","SARS-CoV-2","GCATCTACAACTCATG",2,39.39,10.92,0.16,0.08,2.91,1.01,0,">1 nonsynonymous","L122V V153E",2
"lib1","SARS-CoV-2","GCATCTATCCGAGTAT",7,153.9,10.65,-0.11,0.03,2.9,1.05,0,">1 nonsynonymous","G51R D97T P149E",3
"lib1","SARS-CoV-2","GCATCTCAAAACGCGA",2,11.51,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S29T R124P T148M",3
"lib1","SARS-CoV-2","GCATCTCAACGCCGCA",4,17,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G86K D97Y N107E Y121R P177V V182A",6
"lib1","SARS-CoV-2","GCATCTCAATATCCCT",1,78.96,9.51,-1.25,0.08,2.88,1.05,0,">1 nonsynonymous","Q168V V173I",2
"lib1","SARS-CoV-2","GCATCTCACTTCAATA",3,76.83,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","V37S D97V R127P C158N",4
"lib1","SARS-CoV-2","GCATCTCCGAGAATCA",3,15.1,8.51,-2.26,0.28,1.85,1.28,0.03,">1 nonsynonymous","E10R R73P",2
"lib1","SARS-CoV-2","GCATCTCCTGCCTGAG",3,40.12,8.73,-2.04,0.21,1.5,1.2,0.02,">1 nonsynonymous","I28T F47I T63G",3
"lib1","SARS-CoV-2","GCATCTCGAGTTTAAA",2,12.65,10.76,-0.01,0.1,2.95,1.05,0,"1 nonsynonymous","N64M",1
"lib1","SARS-CoV-2","GCATCTCGATTGCGAA",3,147.92,9.39,-1.37,0.08,2.31,1.11,0,">1 nonsynonymous","N40I V115Q Y121L",3
"lib1","SARS-CoV-2","GCATCTGCACCCTTTC",3,315.73,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41T G74C D97K N120M P149N L162E",6
"lib1","SARS-CoV-2","GCATCTGCCTACGAAT",2,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98R D137M T148V Y159R",4
"lib1","SARS-CoV-2","GCATCTGTATAACATT",1,6.77,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D98F F167N",2
"lib1","SARS-CoV-2","GCATCTGTTTATACCA",4,43.46,6,-4.76,0.91,1.5,1.11,0.01,">1 nonsynonymous","L5T D68L",2
"lib1","SARS-CoV-2","GCATCTTAATGACGCT",3,43.99,9.92,-0.84,0.1,2.64,1.06,0,">1 nonsynonymous","A105I S164V P197V",3
"lib1","SARS-CoV-2","GCATCTTGGCCCATTG",6,54.04,10.66,-0.1,0.07,2.91,1.07,0,">1 nonsynonymous","P7S L122E",2
"lib1","SARS-CoV-2","GCATCTTTTCGCTCGC",2,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M D34N S41F W106T S129N G155K",6
"lib1","SARS-CoV-2","GCATGAAACACAAACA",1,32.85,10.76,-0.01,0.07,2.89,1.06,0,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","GCATGAAATATACAGC",3,13.04,9.98,-0.78,0.17,2.65,1.09,0.01,">1 nonsynonymous","N1F L162V",2
"lib1","SARS-CoV-2","GCATGAAATGTGTAAT",3,14.39,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N40C V77D Y159Q G166V",4
"lib1","SARS-CoV-2","GCATGAAATTTTTAGC",5,38.49,7.58,-3.18,0.24,1.5,1.17,0.02,">1 nonsynonymous","Y35E T55Q G83R E141F P169L",5
"lib1","SARS-CoV-2","GCATGAACATTTTTCC",6,4.3,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","GCATGAACGTCTTCAT",7,48.33,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I72Y Y91S N107A E141M",4
"lib1","SARS-CoV-2","GCATGAAGAAAGCTCA",1,183.67,10.62,-0.15,0.04,2.87,1.06,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","GCATGAATAACAATCG",1,32.12,9.44,-1.32,0.07,2.47,1.11,0,">1 nonsynonymous","I28E L122Q T170S",3
"lib1","SARS-CoV-2","GCATGAATAAGGCAAA",5,93.9,10.8,0.03,0.07,2.93,1.02,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","GCATGAATTACACGTG",8,47.4,6.18,-4.58,0.66,1.5,1.16,0.02,">1 nonsynonymous","G9K A105P",2
"lib1","SARS-CoV-2","GCATGAATTGTCCGAG",4,128.26,6.18,-4.59,0.84,1.5,1.17,0.03,">1 nonsynonymous","G51C R127S",2
"lib1","SARS-CoV-2","GCATGACAAACACTTA",4,70.91,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F70E F99R A105R R124I T140R F167S",6
"lib1","SARS-CoV-2","GCATGACATACACGCT",1,55.41,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","P161R Y178I",2
"lib1","SARS-CoV-2","GCATGACATAGATAAC",1,17.8,9.58,-1.19,0.09,2.83,1.07,0,">1 nonsynonymous","S45L G152N",2
"lib1","SARS-CoV-2","GCATGACATATATCGT",1,24.96,10.77,0.01,0.07,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATGACCAAACGAAA",2,11,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","T3F A14L L38T S53L P82N L95S N118D V181L",8
"lib1","SARS-CoV-2","GCATGACCCGGGTGTT",9,162.53,10.35,-0.42,0.04,2.91,1.03,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","GCATGACCTAATTCTG",2,32.14,10.64,-0.13,0.05,2.94,1.05,0,">1 nonsynonymous","A42G T55G G83N G152D Q168S",5
"lib1","SARS-CoV-2","GCATGACCTAGGAAAA",4,33.93,8.69,-2.07,0.16,1.5,1.11,0.01,">1 nonsynonymous","F12E G174M",2
"lib1","SARS-CoV-2","GCATGACGCCATACCT",3,13.75,6.35,-4.42,0.84,1.5,1.17,0.05,">1 nonsynonymous","V11C C49I V77W",3
"lib1","SARS-CoV-2","GCATGACTAAAATGCG",4,16.43,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","V20R T55H C102S",3
"lib1","SARS-CoV-2","GCATGACTCATAGCAG",1,39.97,10.66,-0.1,0.06,3,1,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","GCATGAGAAGCCCCTA",1,33.73,10.7,-0.07,0.06,2.98,1,0,"1 nonsynonymous","V180I",1
"lib1","SARS-CoV-2","GCATGAGCGGTTAAAC",3,35.46,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F99D G116M",2
"lib1","SARS-CoV-2","GCATGAGCTAGAAACA",2,35.88,7.82,-2.95,0.15,1.5,1.09,0.01,">1 nonsynonymous","V77M K87Q K94A F156M",4
"lib1","SARS-CoV-2","GCATGATACAAAAACC",6,3.04,NA,NA,NA,NA,NA,NA,"stop","L5W G83D A89* T148F T201M",5
"lib1","SARS-CoV-2","GCATGATACCACCCCA",2,47.64,10.47,-0.3,0.04,2.92,1.03,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","GCATGATATGAAGGAT",3,52.28,10.59,-0.17,0.07,2.94,1,0,">1 nonsynonymous","T63H D90K N120A",3
"lib1","SARS-CoV-2","GCATGATGGCGTTTTA",5,25.55,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L38Q C102V F156L",3
"lib1","SARS-CoV-2","GCATGATTACCCCTAA",7,0.21,NA,NA,NA,NA,NA,NA,"stop","P7R T46M L60* N120T K199P",5
"lib1","SARS-CoV-2","GCATGATTTAAGGAAT",3,14.45,10.69,-0.07,0.06,2.98,1.02,0.01,">1 nonsynonymous","C61R N110M T201Q",3
"lib1","SARS-CoV-2","GCATGCAAAATAGCTA",7,4.32,NA,NA,NA,NA,NA,NA,"stop","A18D G83V D97*",3
"lib1","SARS-CoV-2","GCATGCACACACAGGG",1,12.37,8.96,-1.8,0.22,2.18,1.2,0.01,">1 nonsynonymous","F47L Y121V",2
"lib1","SARS-CoV-2","GCATGCACATATTAAC",5,162.85,9.35,-1.41,0.06,2.83,1.14,0,">1 nonsynonymous","D97L Y119M E141D",3
"lib1","SARS-CoV-2","GCATGCAGAATTGATA",8,87.58,6,-4.76,1.09,1.5,1.17,0.01,">1 nonsynonymous","C31A S43Y G86E T100M G152H",5
"lib1","SARS-CoV-2","GCATGCATAACCCTAA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","I2S S69V T85S D112* G174P",5
"lib1","SARS-CoV-2","GCATGCCCAAATGATT",4,32.8,10.62,-0.15,0.06,2.78,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATGCCCCCTGCTTT",14,85.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A81C W106V N120P F167W",4
"lib1","SARS-CoV-2","GCATGCCGAAACAGGA",1,21.52,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95Y Y143L",2
"lib1","SARS-CoV-2","GCATGCCGCGACACAA",1,50.37,8.54,-2.22,0.15,2.63,1.02,0.01,">1 nonsynonymous","Y91H K132M N157G",3
"lib1","SARS-CoV-2","GCATGCGATTATGAAT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91D K114G",2
"lib1","SARS-CoV-2","GCATGCGGTTTTTATA",2,21.02,6.18,-4.59,0.91,1.5,1.13,0.04,">1 nonsynonymous","T63C G74T G146V",3
"lib1","SARS-CoV-2","GCATGCGTGAAGCTAT",2,27.87,6,-4.76,2,1.5,1.3,0.04,"1 nonsynonymous","F70W",1
"lib1","SARS-CoV-2","GCATGCTATTCCGAAG",8,142.92,10.78,0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATGCTCGGCGATCG",8,148.54,10.81,0.04,0.08,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GCATGGAAAACTAAAC",5,42.58,6.34,-4.43,0.65,1.5,1.21,0.03,">1 nonsynonymous","Y91V E154V R179S K198V",4
"lib1","SARS-CoV-2","GCATGGAAAGCGACAC",7,50.34,6,-4.76,1.97,3,1.21,0.01,">1 nonsynonymous","C6R Y35F F44A V103L",4
"lib1","SARS-CoV-2","GCATGGAGGATTAAAT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","F17S N64*",2
"lib1","SARS-CoV-2","GCATGGCCACCAGATT",1,41.8,10.64,-0.13,0.09,2.82,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATGGCTGGCATAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","G86F E141*",2
"lib1","SARS-CoV-2","GCATGGGATCAGCCAC",2,26.95,6.1,-4.66,0.66,1.5,1.11,0.01,">1 nonsynonymous","L5K I80Q",2
"lib1","SARS-CoV-2","GCATGGGCCCAAGAAC",4,76.33,10.77,0.01,0.08,2.91,1.06,0,">1 nonsynonymous","S129R N171I",2
"lib1","SARS-CoV-2","GCATGGTAAACATTTG",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q T46I Q84H Y123P",4
"lib1","SARS-CoV-2","GCATGGTAACTGGTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1V A105* T148I K198P",4
"lib1","SARS-CoV-2","GCATGGTACCGAAATC",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I F70I P96I T100S",4
"lib1","SARS-CoV-2","GCATGGTTTGCGCAAC",9,179.46,10.06,-0.7,0.07,2.54,1.04,0,">1 nonsynonymous","I28W F99I",2
"lib1","SARS-CoV-2","GCATGTAAAATAGAAT",5,76.21,7.55,-3.21,0.09,2.63,1.1,0,">1 nonsynonymous","F126S G174R",2
"lib1","SARS-CoV-2","GCATGTACTATTTTTA",1,27.16,6,-4.76,1.98,1.5,1.33,0.04,">1 nonsynonymous","I104D G116R",2
"lib1","SARS-CoV-2","GCATGTATCCGTTAAA",2,2.51,NA,NA,NA,NA,NA,NA,"stop","I2* F160L K198N",3
"lib1","SARS-CoV-2","GCATGTCTACGTACGT",1,13.94,8.83,-1.93,0.25,1.56,1.14,0.02,">1 nonsynonymous","D90W P133C",2
"lib1","SARS-CoV-2","GCATGTGCTAGCCTTA",9,72.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9P A18G D34V L60S C150R Y178V",6
"lib1","SARS-CoV-2","GCATGTTGACTAGAAC",2,10.6,6.12,-4.64,0.49,2.45,1.05,0,">1 nonsynonymous","C6Y R136I V180F",3
"lib1","SARS-CoV-2","GCATGTTTTTGTCTCA",1,7.01,9.63,-1.14,0.14,2.73,1,0.01,"1 nonsynonymous","N107D",1
"lib1","SARS-CoV-2","GCATTAAAAAAATAAC",4,16.8,10.86,0.09,0.09,2.81,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GCATTAAACTTATTGA",3,58.91,6.18,-4.59,0.71,1.5,1.16,0.02,">1 nonsynonymous","Q84H F185D",2
"lib1","SARS-CoV-2","GCATTAAAGATCCATA",2,55.57,7,-3.76,0.44,1.5,1.3,0.03,">1 nonsynonymous","V11G N64K A81M V173D",4
"lib1","SARS-CoV-2","GCATTAAATATTAACG",16,185.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T55R Y93L Y119G G152S",4
"lib1","SARS-CoV-2","GCATTAAATCCATTAC",1,12.92,10.57,-0.19,0.07,2.85,1.14,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","GCATTAACATAACATG",7,78.2,8.41,-2.36,0.15,2,1.13,0.01,">1 nonsynonymous","I28G G166V",2
"lib1","SARS-CoV-2","GCATTAACCCGTAACG",1,21.1,6,-4.76,2,1.5,1.39,0.06,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","GCATTAAGATAAATAT",5,27.78,8.84,-1.92,0.19,2.26,1.11,0.02,"1 nonsynonymous","Y165Q",1
"lib1","SARS-CoV-2","GCATTAAGGAAAGCAG",2,17.11,10.77,0.01,0.1,2.89,1.07,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","GCATTAAGGACAGATT",6,0.67,NA,NA,NA,NA,NA,NA,"stop","C61M S69A G83Y Y91T Y119V E141*",6
"lib1","SARS-CoV-2","GCATTAAGGGCTTATT",2,14.84,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G83Q N107I Y159H",3
"lib1","SARS-CoV-2","GCATTAATAACTAAAG",5,54.5,9.7,-1.07,0.03,2.88,1.07,0,">1 nonsynonymous","A145R N151L",2
"lib1","SARS-CoV-2","GCATTAATAATCGTCG",9,105.21,8.64,-2.13,0.13,2.58,1.06,0.01,">1 nonsynonymous","K56L A81M Q168D",3
"lib1","SARS-CoV-2","GCATTAATAGAAATTA",2,6.55,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","Y91T L122V P177K",3
"lib1","SARS-CoV-2","GCATTACACTAATCAA",5,157.41,10.74,-0.02,0.07,2.86,1.04,0,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","GCATTACATCATTGAC",2,20.98,8.05,-2.71,0.25,1.6,1.24,0.02,">1 nonsynonymous","S41Q S108M G152T",3
"lib1","SARS-CoV-2","GCATTACCCATCATTC",6,73.55,7.65,-3.11,0.18,1.5,1.11,0.01,">1 nonsynonymous","C6P N130C E141C",3
"lib1","SARS-CoV-2","GCATTACCCGTTTCGG",3,20.73,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","Y50R P96A G116V F156G",4
"lib1","SARS-CoV-2","GCATTACTAAATAGTG",9,134.97,10.71,-0.05,0.09,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATTACTAACGAATT",7,93.61,10.16,-0.61,0.05,2.93,1,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","GCATTACTAGTTATGG",7,59.34,8.95,-1.81,0.09,2.6,1.09,0,">1 nonsynonymous","E10V T85K E141K G174T",4
"lib1","SARS-CoV-2","GCATTACTTTTATCTG",7,134.33,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12V L125M C158K",3
"lib1","SARS-CoV-2","GCATTAGCTACCTATA",1,6.98,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y121P L162P",2
"lib1","SARS-CoV-2","GCATTAGGTAAAGTAA",7,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GCATTAGTAAGCTAAA",1,24.33,8.51,-2.26,0.17,2.42,1.1,0.01,">1 nonsynonymous","N40T Y119K F134C Q168T",4
"lib1","SARS-CoV-2","GCATTAGTGTCCGGCC",2,6.12,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","V65T N107Q G152C",3
"lib1","SARS-CoV-2","GCATTAGTGTCCTGTT",4,72.08,7.95,-2.82,0.2,1.59,1.13,0.01,">1 nonsynonymous","S29F K48G L125S F160L",4
"lib1","SARS-CoV-2","GCATTATAACCAACTT",5,60.06,10.6,-0.16,0.06,2.98,1,0,"1 nonsynonymous","D97Y",1
"lib1","SARS-CoV-2","GCATTATACACTCGAC",5,1.05,NA,NA,NA,NA,NA,NA,"stop","Y39W D90* N109R P149H Y175E",5
"lib1","SARS-CoV-2","GCATTATACCATCTAC",2,64.88,8.48,-2.29,0.11,2.97,1.03,0.01,">1 nonsynonymous","N64Y K87D Y119H K128H",4
"lib1","SARS-CoV-2","GCATTATCAAGCAAAA",9,131.42,10.72,-0.04,0.07,2.87,1.09,0,">1 nonsynonymous","L5Q V37L",2
"lib1","SARS-CoV-2","GCATTATGACTAAACT",4,98.78,10.45,-0.31,0.04,2.85,1.08,0,">1 nonsynonymous","F12L T201L",2
"lib1","SARS-CoV-2","GCATTATTTTCAAGAG",1,1.98,NA,NA,NA,NA,NA,NA,"stop","C6* N64L A89Y K199N",4
"lib1","SARS-CoV-2","GCATTCAAAATTCAAT",2,11.5,9.7,-1.06,0.2,2.17,1.09,0.01,">1 nonsynonymous","D59H N110L R136F",3
"lib1","SARS-CoV-2","GCATTCAAAGTGTACC",2,84.96,10.26,-0.5,0.06,2.76,1.06,0,">1 nonsynonymous","E10V D90R",2
"lib1","SARS-CoV-2","GCATTCAACAGGCCAA",2,58.37,9.76,-1.01,0.15,1.94,1.09,0.01,"1 nonsynonymous","V11G",1
"lib1","SARS-CoV-2","GCATTCAACGTTTCCA",1,6.35,10.43,-0.33,0.08,2.92,1,0,">1 nonsynonymous","L5W P149L",2
"lib1","SARS-CoV-2","GCATTCAGGATGCCAT",7,68.02,9.85,-0.92,0.09,2.6,1.01,0,">1 nonsynonymous","Q84T E141R G152V",3
"lib1","SARS-CoV-2","GCATTCAGGTATCCTT",2,62.25,10.64,-0.12,0.05,2.88,1.05,0,"1 nonsynonymous","T55C",1
"lib1","SARS-CoV-2","GCATTCATACTTCGAC",10,2.04,NA,NA,NA,NA,NA,NA,"stop","V52I G83* R124F",3
"lib1","SARS-CoV-2","GCATTCATCATGTCTT",3,64.47,10.26,-0.5,0.09,2.74,1.01,0,">1 nonsynonymous","D90S E141P T201G",3
"lib1","SARS-CoV-2","GCATTCCAGTTGCAAC",4,7.91,10.32,-0.45,0.33,2.13,1,0.05,">1 nonsynonymous","T3E A81N N107V V173L",4
"lib1","SARS-CoV-2","GCATTCCCGAGCGCCA",2,49.06,6.73,-4.03,0.54,1.64,1.14,0.04,">1 nonsynonymous","Y21R C49V Y178L",3
"lib1","SARS-CoV-2","GCATTCGAGAACACTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib1","SARS-CoV-2","GCATTCGTATAAATTG",1,12.12,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N1K Y39W S139R F167M",4
"lib1","SARS-CoV-2","GCATTCTCCAAAACCG",6,0.08,NA,NA,NA,NA,NA,NA,"stop","G9K T55C I104P S184*",4
"lib1","SARS-CoV-2","GCATTCTCCACACAAA",3,84.94,10.22,-0.54,0.06,2.85,1,0,">1 nonsynonymous","V32P S184V",2
"lib1","SARS-CoV-2","GCATTCTGATACCCTA",5,83.04,10.78,0.02,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATTGAAATATGACA",2,10.45,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","A81V F99L G146L",3
"lib1","SARS-CoV-2","GCATTGAACAAAATAC",2,74.86,8.27,-2.49,0.2,1.5,1.17,0.02,">1 nonsynonymous","Q84R T100G P169H",3
"lib1","SARS-CoV-2","GCATTGAACCATACGT",6,3.43,NA,NA,NA,NA,NA,NA,"stop","N4T I28* C49P K128* G146D N151T",6
"lib1","SARS-CoV-2","GCATTGAATAAGAAGG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","L5K V37* K94*",3
"lib1","SARS-CoV-2","GCATTGAGACCTCCTA",8,66.66,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2K V37L W106P S113N Y143L T148N",6
"lib1","SARS-CoV-2","GCATTGAGACGACCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V71* Y91A I104C P149Y",4
"lib1","SARS-CoV-2","GCATTGAGAGACATGA",1,21.46,9.67,-1.1,0.16,2.56,1.08,0.01,">1 nonsynonymous","Y39V C61K R136L P149T",4
"lib1","SARS-CoV-2","GCATTGATAAAGAAAA",1,11,10.02,-0.74,0.14,2.02,1.04,0.01,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","GCATTGCAAGTGTAAG",3,50.88,10.24,-0.53,0.08,2.82,1.07,0,">1 nonsynonymous","L122F K128Y S139D I142L",4
"lib1","SARS-CoV-2","GCATTGCCAGCACCTA",3,3.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","GCATTGCCTGCACATT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* G51D I104A",3
"lib1","SARS-CoV-2","GCATTGCTCGAACTAT",3,11.35,10.78,0.01,0.05,3,1.01,0,"1 nonsynonymous","T46L",1
"lib1","SARS-CoV-2","GCATTGCTTAAAGTAT",3,58.15,10.84,0.07,0.07,2.89,1.07,0,"1 nonsynonymous","T201D",1
"lib1","SARS-CoV-2","GCATTGGAATATTGGG",4,8.08,10.82,0.06,0.09,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATTGTAGCGGGTCG",3,1.55,NA,NA,NA,NA,NA,NA,"stop","D59* P96I N120Y S139G",4
"lib1","SARS-CoV-2","GCATTGTATGAACTAG",6,0.85,NA,NA,NA,NA,NA,NA,"stop","F99V E135V T140*",3
"lib1","SARS-CoV-2","GCATTGTGATAGAGAT",11,142.27,10.38,-0.39,0.05,2.84,1.01,0,">1 nonsynonymous","I104T N110L",2
"lib1","SARS-CoV-2","GCATTTAAATCAAAGG",2,25.39,9.92,-0.85,0.13,2.66,1.11,0.01,">1 nonsynonymous","S41G T63W P191S",3
"lib1","SARS-CoV-2","GCATTTAACATTGCGG",2,37.01,10.8,0.03,0.06,2.99,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATTTAACGCGACCT",2,16.97,7.64,-3.12,0.32,1.59,1.21,0.03,">1 nonsynonymous","R16I N92D T201Q",3
"lib1","SARS-CoV-2","GCATTTAACTTAAAGT",2,15.04,9.42,-1.34,0.15,2.01,1.21,0.02,">1 nonsynonymous","G86D T100F",2
"lib1","SARS-CoV-2","GCATTTAATCCGATCC",1,19.82,10.81,0.05,0.1,2.95,1,0,"1 nonsynonymous","N64P",1
"lib1","SARS-CoV-2","GCATTTAATTGCTAAG",5,69.58,9.95,-0.81,0.1,2.47,1.04,0,">1 nonsynonymous","S41V L57Y",2
"lib1","SARS-CoV-2","GCATTTACTGAAAAAC",2,67.07,10.91,0.15,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCATTTACTGAGAGTC",4,10.25,NA,NA,NA,NA,NA,NA,"stop","A89L Y119* P149D",3
"lib1","SARS-CoV-2","GCATTTAGGGGTCACC",4,126.21,10.75,-0.01,0.06,2.92,1.03,0,"1 nonsynonymous","N151R",1
"lib1","SARS-CoV-2","GCATTTAGGTTTACTA",1,39.81,9.71,-1.05,0.09,2.01,1.05,0,">1 nonsynonymous","G51V T140C",2
"lib1","SARS-CoV-2","GCATTTATATAAGTTA",2,13.64,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I72G C102R P149H T201E",4
"lib1","SARS-CoV-2","GCATTTATCTAACTTA",5,33.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T46L N107T Y119L",3
"lib1","SARS-CoV-2","GCATTTATGTGTTAGA",5,44.3,8.46,-2.31,0.19,1.5,1.12,0.01,">1 nonsynonymous","K132T P161C",2
"lib1","SARS-CoV-2","GCATTTCCACAGTCCT",6,80.37,7.81,-2.96,0.17,1.54,1.14,0.01,">1 nonsynonymous","V20S Y175N",2
"lib1","SARS-CoV-2","GCATTTCCACATGAGC",2,29.06,7.73,-3.04,0.35,1.53,1.36,0.03,">1 nonsynonymous","Y35R V103S V115S P161N T170F",5
"lib1","SARS-CoV-2","GCATTTCCACCCTATT",6,70.74,6.21,-4.55,0.42,1.5,1.15,0.01,">1 nonsynonymous","N107T G146Y",2
"lib1","SARS-CoV-2","GCATTTCCGCGTGCTA",6,47.36,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","S41L Y93H F167H",3
"lib1","SARS-CoV-2","GCATTTCTAAAAATGT",8,46.08,10.72,-0.05,0.04,2.94,1.04,0,">1 nonsynonymous","T3S I104Y",2
"lib1","SARS-CoV-2","GCATTTCTTCAGGAAT",3,17.36,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","L38Y G86R L95M",3
"lib1","SARS-CoV-2","GCATTTGCAATTTAGA",1,33.22,10.31,-0.45,0.1,2.54,1,0.01,">1 nonsynonymous","C6S L60K",2
"lib1","SARS-CoV-2","GCATTTGCTGACTCGG",2,31.57,10.51,-0.26,0.07,2.87,1.07,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","GCATTTGCTTCCGTAT",7,104.72,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T63Y K87L G172K S184H",4
"lib1","SARS-CoV-2","GCATTTGCTTTCGTCC",1,0.76,NA,NA,NA,NA,NA,NA,"stop","G83W D112P N130* I142S N171E",5
"lib1","SARS-CoV-2","GCATTTGGTGCATATA",4,16.49,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","A33P D137L",2
"lib1","SARS-CoV-2","GCATTTTATTACCTGG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","G9T C49* S184P",3
"lib1","SARS-CoV-2","GCATTTTATTATTGGC",1,48.18,10.45,-0.31,0.09,2.82,1.06,0,">1 nonsynonymous","N64Q S147L L187C",3
"lib1","SARS-CoV-2","GCCAAAAACCAAGACA",1,32.83,9.98,-0.78,0.07,2.74,1.06,0,">1 nonsynonymous","L57C R73T T201G",3
"lib1","SARS-CoV-2","GCCAAAAACGCCCAAT",1,29.6,9.91,-0.86,0.1,2.21,1.06,0,">1 nonsynonymous","D34G S184A",2
"lib1","SARS-CoV-2","GCCAAAAAGTCCTTAA",3,40.16,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","S43C F99V I104K L122S Y159R T170G",6
"lib1","SARS-CoV-2","GCCAAAAATCATTCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N13S F62V Q168R",4
"lib1","SARS-CoV-2","GCCAAAACACTTCGAA",12,140.27,10.26,-0.51,0.04,2.89,1.01,0,">1 nonsynonymous","K87L G116W",2
"lib1","SARS-CoV-2","GCCAAAACAGTCATAG",7,25.58,8.41,-2.36,0.39,1.5,1.02,0.05,">1 nonsynonymous","D112V S164L",2
"lib1","SARS-CoV-2","GCCAAAAGAATTCCAG",1,32.63,8.97,-1.79,0.14,1.83,1.12,0.01,">1 nonsynonymous","N4D A22K C61T Y121N",4
"lib1","SARS-CoV-2","GCCAAAAGAGAAGCAT",3,14.95,8.04,-2.73,0.35,1.5,1.25,0.02,"1 nonsynonymous","K94D",1
"lib1","SARS-CoV-2","GCCAAAAGCGGTCAGT",3,49.69,10.51,-0.25,0.05,2.95,1.01,0,"1 nonsynonymous","N4F",1
"lib1","SARS-CoV-2","GCCAAAAGGGAAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42Y K198*",2
"lib1","SARS-CoV-2","GCCAAAAGGGGCTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7T A67Y D90V N107*",4
"lib1","SARS-CoV-2","GCCAAAATCAATGCAC",1,22.53,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","Y165L P177R",2
"lib1","SARS-CoV-2","GCCAAAATCTTACCAT",1,20.77,10.51,-0.25,0.11,2.83,1.12,0.01,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","GCCAAAATGTTTACGA",5,83.99,10.72,-0.05,0.03,2.92,1.02,0,">1 nonsynonymous","A67L N171I",2
"lib1","SARS-CoV-2","GCCAAACCACACGATG",3,20.87,8.35,-2.42,0.18,2.89,1.02,0.01,">1 nonsynonymous","G9A S43V Y175A",3
"lib1","SARS-CoV-2","GCCAAACCAGTATGTG",3,28.11,6,-4.76,2,3,1.18,0.02,">1 nonsynonymous","S41V N92M",2
"lib1","SARS-CoV-2","GCCAAACCCGATTCGT",2,23.95,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S19P R25P K114N G155L Y178F L183D",6
"lib1","SARS-CoV-2","GCCAAACCGTAAAATA",1,23.74,9.86,-0.91,0.3,2.49,1.2,0.04,">1 nonsynonymous","S36L S45N",2
"lib1","SARS-CoV-2","GCCAAACGACTCCAAG",1,55.02,10.31,-0.45,0.06,2.88,1.05,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","GCCAAACGATAGCCAC",2,12.46,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","G9V D90T G101R K199Q",4
"lib1","SARS-CoV-2","GCCAAACGGCTTGAAG",1,6.18,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A18P Y93C I142F Y165C",4
"lib1","SARS-CoV-2","GCCAAACTACCAGGTA",3,9.99,8.48,-2.28,0.47,1.66,1.02,0.07,">1 nonsynonymous","Y50T P96V P149H",3
"lib1","SARS-CoV-2","GCCAAACTCAACTGGA",1,20.31,6.87,-3.89,0.18,1.5,1.01,0.01,">1 nonsynonymous","A33N Y119E P161M",3
"lib1","SARS-CoV-2","GCCAAACTCTATAAGT",9,53.37,6.53,-4.23,0.56,1.5,1.15,0.04,">1 nonsynonymous","G9C S41L P54V A89Q N118H I142P F156Y",7
"lib1","SARS-CoV-2","GCCAAAGACGACATGT",1,28.63,10.72,-0.04,0.04,2.95,1.02,0,">1 nonsynonymous","Y39T N110Y P149M",3
"lib1","SARS-CoV-2","GCCAAAGAGACAACCA",10,42.92,8.11,-2.65,0.46,1.5,1.04,0.07,">1 nonsynonymous","G86S Y93F D112Y I138W",4
"lib1","SARS-CoV-2","GCCAAAGATTCACAGC",2,58.66,10.79,0.03,0.09,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAAAGATTTAAAAT",5,112.16,10.79,0.02,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAAAGTTACCAGCA",1,2.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167S",1
"lib1","SARS-CoV-2","GCCAAATAACAACTGA",3,37.76,10.78,0.02,0.07,2.93,1.03,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","GCCAAATAACGCCTGC",2,28,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V37R L60K N109T Y143S G174I",5
"lib1","SARS-CoV-2","GCCAAATAATTACTAA",4,40.36,9.61,-1.16,0.08,2.24,1.05,0,"1 nonsynonymous","V11H",1
"lib1","SARS-CoV-2","GCCAAATAGCAAAATA",4,40.08,9.48,-1.28,0.13,2.29,1.15,0.01,">1 nonsynonymous","N24F E154H",2
"lib1","SARS-CoV-2","GCCAAATATTCACGAA",2,48.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Q P96D Y175L",3
"lib1","SARS-CoV-2","GCCAAATCATAATATG",1,5.22,6.8,-3.96,1.27,1.5,1.22,0.04,">1 nonsynonymous","N1C A89R L131E",3
"lib1","SARS-CoV-2","GCCAAATTAATGTAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","D98* A105T S113G Y121P P149S H189I",6
"lib1","SARS-CoV-2","GCCAAATTATAATAAC",9,97.66,8.47,-2.29,0.21,1.5,1.1,0.01,">1 nonsynonymous","V37L I88F",2
"lib1","SARS-CoV-2","GCCAACAAACGTATAC",6,10.01,NA,NA,NA,NA,NA,NA,"stop","F12S T55N V103* N107R A192T",5
"lib1","SARS-CoV-2","GCCAACAAATTAAACT",10,146.1,10.47,-0.3,0.05,2.86,1.02,0,">1 nonsynonymous","C6D V32T K56Q",3
"lib1","SARS-CoV-2","GCCAACAAGAAGTAAG",4,3.15,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","GCCAACACATAAGACG",3,76.36,9.72,-1.04,0.06,2.79,1.08,0,">1 nonsynonymous","F44N V173M L187F A192N",4
"lib1","SARS-CoV-2","GCCAACACGTGAACCG",5,77.49,6,-4.76,1.45,1.5,1.14,0.01,">1 nonsynonymous","R25K N92R S108F",3
"lib1","SARS-CoV-2","GCCAACACTAACTCAT",7,56.96,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A22L T63R D90V S113V V115M Y175W",6
"lib1","SARS-CoV-2","GCCAACACTTCGCACC",1,60.22,10.21,-0.56,0.05,2.89,1.04,0,">1 nonsynonymous","D34K C61L",2
"lib1","SARS-CoV-2","GCCAACAGTTGGCGCA",4,64.05,6.96,-3.81,0.22,1.5,1.15,0.01,">1 nonsynonymous","A42V C150A",2
"lib1","SARS-CoV-2","GCCAACATCTCAATTG",5,23.83,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","C61S N107M P133L G155A",4
"lib1","SARS-CoV-2","GCCAACCAACTAACAT",3,70.73,8.92,-1.84,0.16,1.61,1.18,0.01,">1 nonsynonymous","F8S Y39L A89S",3
"lib1","SARS-CoV-2","GCCAACCCAGTGAACT",4,36.37,10.77,0,0.09,2.85,1.1,0,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","GCCAACCCGAAAGTAC",1,14.42,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","GCCAACCCGATTCAGG",4,50.01,10.47,-0.29,0.07,2.89,1.04,0,">1 nonsynonymous","N64Q G155R",2
"lib1","SARS-CoV-2","GCCAACTAAAGGACGA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V G146V Q163L",3
"lib1","SARS-CoV-2","GCCAACTAAGCCTAAA",9,141.17,10.66,-0.11,0.05,2.9,1.05,0,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","GCCAACTACTACAATA",1,223.96,10.63,-0.13,0.04,2.91,1.04,0,">1 nonsynonymous","G9N S36I S43V",3
"lib1","SARS-CoV-2","GCCAACTGTCCAGTAT",2,13.16,10.55,-0.21,0.07,2.89,1.09,0,">1 nonsynonymous","Y91L V173K",2
"lib1","SARS-CoV-2","GCCAACTTTTTCAAAA",4,53.95,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K48S T63E S164M R179Y",4
"lib1","SARS-CoV-2","GCCAAGAAATTAGTCG",7,62.9,10.71,-0.05,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAAGAACTCCGTAA",1,21.52,9.86,-0.9,0.14,2.48,1.02,0,">1 nonsynonymous","D34K P149F",2
"lib1","SARS-CoV-2","GCCAAGAAGCAGCACA",3,47.5,7.13,-3.63,0.3,1.5,1.17,0.02,">1 nonsynonymous","P7G V37W A81L Y91A",4
"lib1","SARS-CoV-2","GCCAAGAAGGTTAAGT",6,129.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7T G86Y N107P",3
"lib1","SARS-CoV-2","GCCAAGACAATGGGCT",2,51.52,10.66,-0.11,0.07,2.95,1.01,0,">1 nonsynonymous","N130A P149V V173L A190P",4
"lib1","SARS-CoV-2","GCCAAGACAGTCACAC",8,112.57,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A89N G172V",2
"lib1","SARS-CoV-2","GCCAAGAGACGTACCT",9,37.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9F F99Y V103E K128T C158V",5
"lib1","SARS-CoV-2","GCCAAGAGTTTGTAGA",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R N40S D59L L122E Q144L",5
"lib1","SARS-CoV-2","GCCAAGATGACACATG",3,0,NA,NA,NA,NA,NA,NA,"stop","L5K D34R F44Y N151*",4
"lib1","SARS-CoV-2","GCCAAGCACAACCTTC",3,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26V S45W I72E",3
"lib1","SARS-CoV-2","GCCAAGCACAACGAAT",3,13.77,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","W23E Y35H T55S L162G",4
"lib1","SARS-CoV-2","GCCAAGCAGAGGACAG",6,39.56,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","N4R A14F F47R S129Y Y175L S184Y",6
"lib1","SARS-CoV-2","GCCAAGCTGATTATGT",8,14.49,6.01,-4.75,0.33,1.5,1.04,0,">1 nonsynonymous","I2R F8I T15V V65T Y119T G152W",6
"lib1","SARS-CoV-2","GCCAAGCTTGAAAACG",4,14.72,10.33,-0.43,0.14,2.4,1.11,0.01,"1 nonsynonymous","Q168P",1
"lib1","SARS-CoV-2","GCCAAGGAAAGCCCAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","R25I G51E T201*",3
"lib1","SARS-CoV-2","GCCAAGGAACCGGAAC",5,45.49,10.82,0.05,0.07,2.89,1.05,0,"1 nonsynonymous","Y50F",1
"lib1","SARS-CoV-2","GCCAAGGACCAAACTA",1,14.69,9.94,-0.82,0.31,1.78,1.04,0.03,">1 nonsynonymous","L95T E154K",2
"lib1","SARS-CoV-2","GCCAAGGACCATGTAA",2,42.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90T V103Q N107G L122P K132L",5
"lib1","SARS-CoV-2","GCCAAGTAAACTCAAT",1,8.4,10.45,-0.32,0.07,2.95,1,0,">1 nonsynonymous","T15N N130L",2
"lib1","SARS-CoV-2","GCCAAGTGAACACCCG",2,5.77,10.8,0.04,0.1,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAATAAAACAAAAG",1,19.96,10.71,-0.06,0.08,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAATAATCATCAAC",4,37.94,8.55,-2.21,0.14,2.17,1.19,0.01,">1 nonsynonymous","C6S Y143M",2
"lib1","SARS-CoV-2","GCCAATACCATAGATA",1,11.8,10.21,-0.55,0.14,2.79,1,0.01,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","GCCAATACTTACTTTG",2,1.59,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib1","SARS-CoV-2","GCCAATAGCCATACAC",2,10.35,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","F12S R73A T201Y",3
"lib1","SARS-CoV-2","GCCAATAGGATGTTGG",2,21.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3K V37G A105L P133F G174D R179D",6
"lib1","SARS-CoV-2","GCCAATATAAATAAAG",1,32.34,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","N64Q I72C Q79V N120S",4
"lib1","SARS-CoV-2","GCCAATATAGATTACA",11,127.72,10.06,-0.71,0.08,2.56,1.03,0,">1 nonsynonymous","D34G N64S P191G K198T",4
"lib1","SARS-CoV-2","GCCAATATCGAGTAAA",5,157.02,10.42,-0.35,0.04,2.94,1,0,"1 nonsynonymous","V181I",1
"lib1","SARS-CoV-2","GCCAATATTCACTTAA",2,2.34,NA,NA,NA,NA,NA,NA,"stop","F44H N110T Y121* T201Y",4
"lib1","SARS-CoV-2","GCCAATCACAATAAAT",4,22.59,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W23G C31F D34Q D97N L125S E135A",6
"lib1","SARS-CoV-2","GCCAATCACACTTCTA",6,1.04,NA,NA,NA,NA,NA,NA,"stop","S29E A89* D112T S129R",4
"lib1","SARS-CoV-2","GCCAATCACCACTTCA",1,12.96,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","G117A T140N G146Y S184P",4
"lib1","SARS-CoV-2","GCCAATCATGCTTAAC",9,54.5,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","N92T W106S",2
"lib1","SARS-CoV-2","GCCAATCATTTTAAAC",6,103.51,9.01,-1.75,0.22,1.9,1.13,0.02,">1 nonsynonymous","W106Q Y143W",2
"lib1","SARS-CoV-2","GCCAATCCAGGATCAG",2,29.5,6,-4.76,1.97,1.69,1.17,0.01,">1 nonsynonymous","F62G Q84L S113C N120V F160S",5
"lib1","SARS-CoV-2","GCCAATCCGCGACATA",9,1.29,NA,NA,NA,NA,NA,NA,"stop","A89S Y143* Q163L L183A",4
"lib1","SARS-CoV-2","GCCAATCCGTATTGCA",3,8.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58S D97K S108L L122I I142T",5
"lib1","SARS-CoV-2","GCCAATCCTCACTAAC",5,55.74,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R27Q D97Y C150T",3
"lib1","SARS-CoV-2","GCCAATCGAGGACCTA",2,25.22,10.79,0.03,0.09,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAATCTAGAGAGTT",1,17.73,10.18,-0.59,0.09,2.93,1.01,0,">1 nonsynonymous","P7W S43I K56S T63S",4
"lib1","SARS-CoV-2","GCCAATCTGACTCCAT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","G74* K114D K198V",3
"lib1","SARS-CoV-2","GCCAATCTTATGAACC",2,14.58,7.37,-3.4,0.6,1.5,1.12,0.07,">1 nonsynonymous","G86E A105R S139H",3
"lib1","SARS-CoV-2","GCCAATCTTGCGCATT",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I V37P",2
"lib1","SARS-CoV-2","GCCAATGAATTCACAT",4,40.82,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2P C49M Y123I F134P",4
"lib1","SARS-CoV-2","GCCAATGATTAGTGAC",6,82.49,10.65,-0.11,0.06,2.89,1.04,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","GCCAATGCCGTGATAA",2,6.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34R N64D L95M T148C Q168V",5
"lib1","SARS-CoV-2","GCCAATGCGTATCGCT",3,119.2,10.79,0.03,0.08,2.85,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GCCAATGGAACCGGTA",6,174.29,10.38,-0.38,0.04,2.96,1,0,">1 nonsynonymous","A33V K87W",2
"lib1","SARS-CoV-2","GCCAATGTCGGGGGAG",1,16.24,6.18,-4.58,0.77,1.5,1.18,0.02,">1 nonsynonymous","G51W S139V",2
"lib1","SARS-CoV-2","GCCAATTAAAATCGTA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","R16K S36* V115G G146Y N157C",5
"lib1","SARS-CoV-2","GCCAATTATTGGCTAT",3,45.02,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A33Q P96V F134I G155Q",4
"lib1","SARS-CoV-2","GCCAATTCATAAAAGC",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S R127V",2
"lib1","SARS-CoV-2","GCCAATTGATACACGC",2,20.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61K V153T N157S Y178E P191W",5
"lib1","SARS-CoV-2","GCCAATTGTTGAAGAT",2,102.33,9,-1.76,0.03,2.81,1.1,0,"1 nonsynonymous","Y119C",1
"lib1","SARS-CoV-2","GCCAATTTACCGAAAT",3,1.17,NA,NA,NA,NA,NA,NA,"stop","A33R G116D L125R N151* Y159A Q176T",6
"lib1","SARS-CoV-2","GCCAATTTGGCCAAAA",3,21.17,6.28,-4.48,1.11,1.5,1.19,0.04,">1 nonsynonymous","P7I K128L G146P",3
"lib1","SARS-CoV-2","GCCACAAAACATCACG",7,25.86,6.47,-4.29,0.48,1.5,1.32,0.03,">1 nonsynonymous","C49Y E141P",2
"lib1","SARS-CoV-2","GCCACAAAGAAAAGAT",4,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S P82W T85L K114L C158A L188D",6
"lib1","SARS-CoV-2","GCCACAACCATGAAAT",8,69.87,10.67,-0.09,0.05,2.98,1.02,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","GCCACAAGAGTCTCTA",1,59.2,8.25,-2.52,0.16,2.4,1.16,0.01,"1 nonsynonymous","Q176D",1
"lib1","SARS-CoV-2","GCCACACACTACCACT",2,14.35,7.63,-3.13,0.48,1.5,1,0.07,">1 nonsynonymous","I2S K48F C102Y",3
"lib1","SARS-CoV-2","GCCACACATTGAACAT",2,7.7,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18E Y165G",2
"lib1","SARS-CoV-2","GCCACACTGAGAACAG",6,98.99,7.79,-2.98,0.14,2.09,1.11,0.01,">1 nonsynonymous","S113I L125G",2
"lib1","SARS-CoV-2","GCCACACTTTACGAAA",7,81.88,7.44,-3.32,0.29,1.5,1.13,0.02,">1 nonsynonymous","G83S S164I T170L",3
"lib1","SARS-CoV-2","GCCACAGAACTACCCT",7,64.84,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G9R L60Y L131W",3
"lib1","SARS-CoV-2","GCCACAGCATTGCACT",4,65.18,10.6,-0.16,0.05,2.92,1.04,0,">1 nonsynonymous","V37M Q144A G152Q",3
"lib1","SARS-CoV-2","GCCACAGCTGACCAGG",8,104.21,10.66,-0.1,0.05,2.92,1.03,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","GCCACAGGAACACAAA",3,15.99,6.93,-3.83,0.37,1.5,1.16,0.03,">1 nonsynonymous","G9S D34I V103C D137Q",4
"lib1","SARS-CoV-2","GCCACATATGGAGTAA",3,23.32,10.67,-0.1,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCACATCAAATAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C K94S F99Q N110F",4
"lib1","SARS-CoV-2","GCCACATCACCAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M T55A Y119R",3
"lib1","SARS-CoV-2","GCCACATCACTTCCCA",1,6.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6F R16V N58S A81G E141T L162W",6
"lib1","SARS-CoV-2","GCCACATCCTACAGTA",4,63.09,10.64,-0.13,0.06,2.81,1.05,0,">1 nonsynonymous","G9E K48H",2
"lib1","SARS-CoV-2","GCCACATCTTTTTCCC",6,0.57,NA,NA,NA,NA,NA,NA,"stop","A89V G174R A192* T201G",4
"lib1","SARS-CoV-2","GCCACATGATTAATAG",1,12.65,7.49,-3.27,0.4,1.5,1.2,0.05,">1 nonsynonymous","C6S E10A Y35I N107H",4
"lib1","SARS-CoV-2","GCCACATGTTCAATCT",4,54.45,10.72,-0.04,0.06,2.86,1.08,0,">1 nonsynonymous","I2C E141V",2
"lib1","SARS-CoV-2","GCCACATTTGGCCCTG",4,71.37,8.94,-1.82,0.37,1.5,1,0.06,">1 nonsynonymous","G51T Y66F S139V",3
"lib1","SARS-CoV-2","GCCACCAATAAGGTCA",3,51.68,10.09,-0.67,0.1,2.41,1,0,">1 nonsynonymous","Q84L G152L",2
"lib1","SARS-CoV-2","GCCACCACCCCAAATA",7,87.8,6.09,-4.68,0.88,1.5,1.23,0.02,">1 nonsynonymous","N4R C61M E141W N157Y",4
"lib1","SARS-CoV-2","GCCACCAGGAACTTTA",3,23.89,6.43,-4.33,0.39,1.5,1.09,0.01,">1 nonsynonymous","C61N Y91C E135N",3
"lib1","SARS-CoV-2","GCCACCAGGATGGGAC",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L A89M D97M N109L L122P",5
"lib1","SARS-CoV-2","GCCACCATAACTATTA",8,125.45,10.42,-0.35,0.05,2.91,1,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","GCCACCATAATAACGG",3,43.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P96S K128M Q176W",3
"lib1","SARS-CoV-2","GCCACCATTCTGAATT",2,67.59,10.29,-0.47,0.06,2.91,1.01,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","GCCACCATTTAAGTAA",8,87.6,8.18,-2.58,0.14,1.8,1.12,0.01,">1 nonsynonymous","T3G D98L G146T G155A",4
"lib1","SARS-CoV-2","GCCACCCCGTTAATTC",2,15.84,10.39,-0.37,0.09,2.93,1.04,0,">1 nonsynonymous","D97S K132I H189N",3
"lib1","SARS-CoV-2","GCCACCCGATGTTAAA",2,8.2,10.06,-0.7,0.22,2.93,1,0.01,">1 nonsynonymous","T15K N58T D97M",3
"lib1","SARS-CoV-2","GCCACCCGTGATAGCC",1,0.46,NA,NA,NA,NA,NA,NA,"stop","R73* E141F",2
"lib1","SARS-CoV-2","GCCACCCTAGGTAAAC",12,130.51,10.76,-0.01,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCACCCTTCGCGAAA",2,37.45,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","Y35I A81K N118Y S139C P191S",5
"lib1","SARS-CoV-2","GCCACCGACAGCTGTA",3,36.72,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A18V T55P S164L Y178I",4
"lib1","SARS-CoV-2","GCCACCTAGGAGTATA",7,2.21,NA,NA,NA,NA,NA,NA,"stop","A42* Y91S G174R",3
"lib1","SARS-CoV-2","GCCACCTGAGCACTTA",2,1.53,NA,NA,NA,NA,NA,NA,"stop","W106* G152S",2
"lib1","SARS-CoV-2","GCCACCTGCAAGAAGG",2,21.2,11.05,0.28,0.11,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCACCTGCCGATGGC",3,30.63,6,-4.76,1.37,3,1.2,0.01,"1 nonsynonymous","I80S",1
"lib1","SARS-CoV-2","GCCACCTTGAGATGAC",1,34.98,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37K Y91P Y123S S129I Q168I P197S",6
"lib1","SARS-CoV-2","GCCACGATATGGATCT",3,73.21,10.85,0.09,0.06,2.95,1.04,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","GCCACGATGTATAAAG",1,45.64,10.72,-0.05,0.07,2.97,1.02,0,"1 nonsynonymous","Y143H",1
"lib1","SARS-CoV-2","GCCACGCAGACCAGGT",18,227.1,9.17,-1.6,0.06,2.75,1.1,0,">1 nonsynonymous","R78H P169R G174W",3
"lib1","SARS-CoV-2","GCCACGCCCACTCCTA",8,592.1,10.18,-0.59,0.04,2.81,1.01,0,">1 nonsynonymous","C61K D90T N120M",3
"lib1","SARS-CoV-2","GCCACGCCGGCGCTTT",7,94.42,10.69,-0.07,0.06,2.92,1.05,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","GCCACGCCGTACTTTG",3,20.82,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A14G Y91V A105T R124N",4
"lib1","SARS-CoV-2","GCCACGCGAGACAGGA",3,175.84,10.49,-0.27,0.04,2.97,1,0,">1 nonsynonymous","Y35A V173Q",2
"lib1","SARS-CoV-2","GCCACGGCATAACACG",4,30.86,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","P7S P82W R136S",3
"lib1","SARS-CoV-2","GCCACGGTATCCCCGT",7,0.49,NA,NA,NA,NA,NA,NA,"stop","T55F K87* K128Y P149H L183S A190S",6
"lib1","SARS-CoV-2","GCCACGTTACAGCGCT",2,49.31,6,-4.76,1.4,1.5,1.12,0.02,">1 nonsynonymous","I2L S19E Y119F I138K",4
"lib1","SARS-CoV-2","GCCACGTTCACTAGTG",2,118.68,10.79,0.02,0.06,2.91,1.06,0,">1 nonsynonymous","N120Q K199S",2
"lib1","SARS-CoV-2","GCCACTAAAACGTCGA",1,16.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20G Y50C F167M",3
"lib1","SARS-CoV-2","GCCACTAACCCTCAAC",17,3.97,NA,NA,NA,NA,NA,NA,"stop","K128C G172S V180*",3
"lib1","SARS-CoV-2","GCCACTACCAATAACT",4,21.65,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","F70E D137S",2
"lib1","SARS-CoV-2","GCCACTACCCTGTACA",8,2.15,NA,NA,NA,NA,NA,NA,"stop","S69* R124L",2
"lib1","SARS-CoV-2","GCCACTATAAACAACA",2,19.23,10.8,0.03,0.06,2.93,1.04,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","GCCACTCAAGAAAAGG",1,20.7,10.75,-0.02,0.04,2.93,1.05,0,"1 nonsynonymous","L188A",1
"lib1","SARS-CoV-2","GCCACTCATTGTCAAA",6,75.52,8.64,-2.12,0.07,2.8,1.04,0,">1 nonsynonymous","G51Q Y159L V173R",3
"lib1","SARS-CoV-2","GCCACTCCATACGATG",1,7.05,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G86R V115L N120R",3
"lib1","SARS-CoV-2","GCCACTGACAAAGTGC",7,63.61,10.57,-0.19,0.06,2.9,1.03,0,"1 nonsynonymous","A89P",1
"lib1","SARS-CoV-2","GCCACTTCTGCGGACC",2,34.68,10.42,-0.35,0.07,2.89,1.06,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","GCCACTTGTTACTAAA",3,128.62,9.83,-0.93,0.1,2.28,1.04,0,"1 nonsynonymous","F8T",1
"lib1","SARS-CoV-2","GCCAGAAAAATAGTAT",5,5.74,NA,NA,NA,NA,NA,NA,"stop","A14L V77G G101W G146V F156*",5
"lib1","SARS-CoV-2","GCCAGAAAACTACAAG",3,23.52,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","I72H P169G",2
"lib1","SARS-CoV-2","GCCAGAAACTAAACGG",2,1.88,NA,NA,NA,NA,NA,NA,"stop","N92L Y123* G146W",3
"lib1","SARS-CoV-2","GCCAGAAACTTAACGT",4,6.92,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L5G A14N C49L I104L V153H",5
"lib1","SARS-CoV-2","GCCAGAAACTTGTTTA",3,28.96,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7S G74M A81H W106F K128N S139R",6
"lib1","SARS-CoV-2","GCCAGAACAAATTGAG",1,32.62,6,-4.76,1.98,3,1.12,0,">1 nonsynonymous","G83Y S113M S139T T170C",4
"lib1","SARS-CoV-2","GCCAGAACCCTGCAAG",1,31.45,8.67,-2.1,0.13,2.66,1.09,0.01,">1 nonsynonymous","C6T E154Y",2
"lib1","SARS-CoV-2","GCCAGAATTCGAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13L L60V L187*",3
"lib1","SARS-CoV-2","GCCAGACATACTGATA",8,46.82,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N4S V52A D137V",3
"lib1","SARS-CoV-2","GCCAGACCCATATATC",8,60.19,10.33,-0.44,0.05,2.87,1.02,0,"1 nonsynonymous","E10C",1
"lib1","SARS-CoV-2","GCCAGACGACTGAAAT",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K P96L E154R",3
"lib1","SARS-CoV-2","GCCAGACTGCGAAATC",3,64.53,10.19,-0.57,0.06,2.92,1.04,0,">1 nonsynonymous","T55L Y91F Q163K P169V",4
"lib1","SARS-CoV-2","GCCAGAGAACCTATTT",2,20.02,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","Y50T A81Y I138R T170L T201M",5
"lib1","SARS-CoV-2","GCCAGAGAACTTCAAT",1,123.73,8.94,-1.83,0.09,2.57,1.08,0,">1 nonsynonymous","P54T Q176S",2
"lib1","SARS-CoV-2","GCCAGAGAAGGCACAG",5,60.78,9.88,-0.88,0.13,1.98,1.06,0.01,">1 nonsynonymous","A89Y T148S",2
"lib1","SARS-CoV-2","GCCAGAGACAAGAACC",1,10.49,9.49,-1.27,0.23,1.64,1.06,0.01,">1 nonsynonymous","T46N Y91Q",2
"lib1","SARS-CoV-2","GCCAGAGACTTATATG",5,0.72,NA,NA,NA,NA,NA,NA,"stop","A14F N24* P177Q",3
"lib1","SARS-CoV-2","GCCAGAGCTGATTGAA",9,80.42,8.48,-2.29,0.26,1.5,1,0.03,">1 nonsynonymous","N4I N24I A42V S139N",4
"lib1","SARS-CoV-2","GCCAGAGTAACATAAA",7,104.97,8.81,-1.96,0.09,2.82,1.1,0,"1 nonsynonymous","S113V",1
"lib1","SARS-CoV-2","GCCAGAGTATTCTAAA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","A81N I104*",2
"lib1","SARS-CoV-2","GCCAGATAACGTCATT",3,20.72,10.46,-0.3,0.08,2.81,1.11,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","GCCAGATATGTAGCTG",1,25.01,10.65,-0.11,0.07,2.97,1.04,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","GCCAGATCAGGCTGTA",11,132.21,10.76,0,0.04,2.94,1.02,0,"1 nonsynonymous","S164A",1
"lib1","SARS-CoV-2","GCCAGATGTGTTATTG",3,124.68,9.83,-0.93,0.1,2.13,1.09,0,">1 nonsynonymous","S36W Y178A H189L",3
"lib1","SARS-CoV-2","GCCAGATTACTACACG",6,136.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5A S19F R27Y T63V G83V K199S",6
"lib1","SARS-CoV-2","GCCAGCAAAAAGAGGA",2,1.54,NA,NA,NA,NA,NA,NA,"stop","A105S Y119C S129* K199W",4
"lib1","SARS-CoV-2","GCCAGCAACTTCTTCC",4,83.45,10.52,-0.25,0.06,2.85,1.03,0,">1 nonsynonymous","A33L G116D",2
"lib1","SARS-CoV-2","GCCAGCCAAAATTAAT",4,13.06,6,-4.76,2,3,1.24,0.06,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","GCCAGCCAAGGATTAA",4,45.53,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","V37D G101Q",2
"lib1","SARS-CoV-2","GCCAGCCAGCCACCGT",3,94.02,10.77,0,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGCGCCCCAGCGC",4,37.55,10.87,0.11,0.08,2.97,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GCCAGCGGCCTTGACG",4,33.52,6.2,-4.57,0.73,1.5,1.08,0.03,">1 nonsynonymous","P96K N109P",2
"lib1","SARS-CoV-2","GCCAGCGGTATAATCC",3,0,NA,NA,NA,NA,NA,NA,"stop","G83S K94N N171*",3
"lib1","SARS-CoV-2","GCCAGCTAAATTACTC",3,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I C6Y F12V T85K",4
"lib1","SARS-CoV-2","GCCAGCTACCGCTAGA",5,110.95,10.74,-0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGCTAGACACATG",1,5.9,7.98,-2.78,0.51,2.01,1.17,0.05,">1 nonsynonymous","A42L S113W",2
"lib1","SARS-CoV-2","GCCAGCTCAGGAAGTA",4,9.2,6.47,-4.3,0.89,1.5,1.14,0.07,">1 nonsynonymous","L38M C49G N64W F70M C158V Y178T",6
"lib1","SARS-CoV-2","GCCAGCTTGAACCTGC",5,36.23,9.7,-1.07,0.29,1.86,1.18,0.05,">1 nonsynonymous","S19M N40F V103Y D137L",4
"lib1","SARS-CoV-2","GCCAGGAACACTAGAT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","Y66* G101*",2
"lib1","SARS-CoV-2","GCCAGGAATCAGTTCG",7,83.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R25T K56R T100M A105S N120I S139G",6
"lib1","SARS-CoV-2","GCCAGGATAAGACAAG",2,7.95,9.77,-1,0.07,3,1.04,0,">1 nonsynonymous","I2P G174C",2
"lib1","SARS-CoV-2","GCCAGGATAATTAATT",1,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84C",1
"lib1","SARS-CoV-2","GCCAGGATATACAGAA",2,63.44,8.39,-2.37,0.11,1.79,1.05,0.01,">1 nonsynonymous","G9S T55C N107V",3
"lib1","SARS-CoV-2","GCCAGGCGCAGATACA",1,9.35,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y35L Y50S D98E Y119V",4
"lib1","SARS-CoV-2","GCCAGGTCAAATACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","V32* S43E",2
"lib1","SARS-CoV-2","GCCAGGTTAAGTCTAT",2,56.71,10.68,-0.08,0.07,2.87,1.08,0,">1 nonsynonymous","T3E K114V",2
"lib1","SARS-CoV-2","GCCAGTAAATCAAGTT",4,65.51,10.65,-0.12,0.04,2.93,1,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","GCCAGTAACAAATAAA",1,6.59,10.81,0.05,0.12,2.99,1.01,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GCCAGTAACAAATGCG",4,33.56,6.2,-4.57,0.73,1.5,1.13,0.02,">1 nonsynonymous","K48P K56F Y159V",3
"lib1","SARS-CoV-2","GCCAGTAACTCTTTAG",6,33.69,6.86,-3.91,0.49,1.5,1.19,0.04,">1 nonsynonymous","L60R A105L",2
"lib1","SARS-CoV-2","GCCAGTAGGATGACAA",2,38.57,10.69,-0.07,0.1,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGTAGGCAAAATA",6,0.5,NA,NA,NA,NA,NA,NA,"stop","T55S C61* N64V Y91I A105L P149N",6
"lib1","SARS-CoV-2","GCCAGTATGACTCTCA",7,144.92,9.91,-0.85,0.08,2.08,1.04,0,">1 nonsynonymous","S19R S129A",2
"lib1","SARS-CoV-2","GCCAGTCACAATCCAG",7,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y K128H R136F",3
"lib1","SARS-CoV-2","GCCAGTCCAATTTCAA",11,88.3,10.77,0.01,0.04,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGTCCGAACAAGT",4,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N92H G116F L183P",4
"lib1","SARS-CoV-2","GCCAGTCGCATCTGAT",3,55.62,8.2,-2.57,0.2,2.16,1.2,0.02,">1 nonsynonymous","K114N Y175S",2
"lib1","SARS-CoV-2","GCCAGTCTGGAGTAAT",4,0.42,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","GCCAGTGACTGACTTT",5,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y C49E P96T R127L",4
"lib1","SARS-CoV-2","GCCAGTGACTTAGACC",3,19.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10M Q84Y L131S R136F C150R",5
"lib1","SARS-CoV-2","GCCAGTGCAGACTTTT",5,56.47,10.53,-0.23,0.08,2.82,1.05,0,"1 nonsynonymous","F134D",1
"lib1","SARS-CoV-2","GCCAGTGGCAAACTTT",3,36.01,10.93,0.17,0.1,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGTGTAAATGATG",8,1.92,NA,NA,NA,NA,NA,NA,"stop","I80M Y119N V153F K198*",4
"lib1","SARS-CoV-2","GCCAGTGTCTCCAACA",1,50.72,6.93,-3.83,0.13,1.5,1.09,0,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","GCCAGTTATGCCCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","R16P S69* E141P",3
"lib1","SARS-CoV-2","GCCAGTTTAAACGAGG",8,67.3,6,-4.76,2,1.5,1.27,0.01,">1 nonsynonymous","C102A G146I",2
"lib1","SARS-CoV-2","GCCAGTTTCTGGTAAC",4,79.78,10.83,0.07,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCAGTTTTAAGCGAA",3,0.62,NA,NA,NA,NA,NA,NA,"stop","V71A K132* E141Y",3
"lib1","SARS-CoV-2","GCCATAAAGTAATAAC",4,46.39,9.23,-1.53,0.16,2.33,1.17,0.01,">1 nonsynonymous","L5H N64T Q176L",3
"lib1","SARS-CoV-2","GCCATAACACAGTCAA",2,62.27,9.86,-0.9,0.11,2.16,1.03,0,">1 nonsynonymous","G9K L38S",2
"lib1","SARS-CoV-2","GCCATAATCTCTCATC",11,77.55,9.88,-0.88,0.37,1.5,1,0.07,">1 nonsynonymous","C6E F44L G101F S113F",4
"lib1","SARS-CoV-2","GCCATACAACAATAAA",3,1.72,NA,NA,NA,NA,NA,NA,"stop","N4V S41V V77* A89H K128T",5
"lib1","SARS-CoV-2","GCCATACACAATTTTA",2,96.83,10.72,-0.05,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCATACATAATCTAG",7,62.52,6.16,-4.6,0.53,1.5,1.14,0.01,">1 nonsynonymous","G51P C158V",2
"lib1","SARS-CoV-2","GCCATACATAGTCTGA",8,62.91,6.98,-3.79,0.56,1.5,1.27,0.06,">1 nonsynonymous","W23A F62N D90L G101P C158V",5
"lib1","SARS-CoV-2","GCCATACGCTAACCGG",5,41.79,6,-4.76,1.38,1.5,1.14,0.02,">1 nonsynonymous","S19Q Y123E L131S",3
"lib1","SARS-CoV-2","GCCATAGAAATTAGGA",2,8.34,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","GCCATAGCCAATCAAG",8,46.97,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A18L A33C P82L G152N S184I",5
"lib1","SARS-CoV-2","GCCATAGCCGCCCAAC",3,31.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12N N120V K132Y Y159R",4
"lib1","SARS-CoV-2","GCCATAGGATAATTTT",7,12.72,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N24W V37R A81T E141N L183P",5
"lib1","SARS-CoV-2","GCCATAGGGGCAGAAC",5,84.26,8.75,-2.01,0.16,1.64,1.11,0.01,">1 nonsynonymous","P7S N58R G86S",3
"lib1","SARS-CoV-2","GCCATATCATATAACG",1,32.57,10.32,-0.44,0.07,2.91,1.04,0,">1 nonsynonymous","G9Q Y39M D90F",3
"lib1","SARS-CoV-2","GCCATATCTCTCTAAC",17,151.86,6,-4.76,1.79,1.5,1.3,0.03,">1 nonsynonymous","T3S F12R C31L F134Y E154N G172L",6
"lib1","SARS-CoV-2","GCCATATTATCCCCCC",2,26.49,6,-4.76,1.95,1.5,1.13,0.03,">1 nonsynonymous","T3Q A81H L131N S184I",4
"lib1","SARS-CoV-2","GCCATATTCTATTCGA",1,105.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9A K56S P177I",3
"lib1","SARS-CoV-2","GCCATCAACACGAAAC",2,4.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCCATCAACTTCCCCA",7,1.11,NA,NA,NA,NA,NA,NA,"stop","A33G P82N S129*",3
"lib1","SARS-CoV-2","GCCATCAATAAGAAGT",6,125.75,10.26,-0.51,0.04,2.87,1.01,0,">1 nonsynonymous","T55K V65S",2
"lib1","SARS-CoV-2","GCCATCAATATACAAT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81I D90K N110Y Y119A F156D T201L",6
"lib1","SARS-CoV-2","GCCATCACCCAAAATC",8,188.61,10.32,-0.45,0.03,2.92,1.02,0,">1 nonsynonymous","K87L L122Y F160R",3
"lib1","SARS-CoV-2","GCCATCAGTCCTAGCA",3,68.31,9.83,-0.93,0.06,2.64,1,0,">1 nonsynonymous","N58D Y121K K198P",3
"lib1","SARS-CoV-2","GCCATCAGTTTACGAT",3,6.43,NA,NA,NA,NA,NA,NA,"stop","G9S C49S F99S V173*",4
"lib1","SARS-CoV-2","GCCATCATCAATCTGA",4,134.09,10.63,-0.14,0.04,2.87,1.06,0,">1 nonsynonymous","N4P D97I E154R",3
"lib1","SARS-CoV-2","GCCATCCAAATAGACC",1,119.08,10.76,-0.01,0.04,2.93,1.03,0,"1 nonsynonymous","N64A",1
"lib1","SARS-CoV-2","GCCATCCACCGTAATG",8,152.7,7.27,-3.5,0.16,1.5,1.16,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","GCCATCCATACACACC",2,0,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","GCCATCCCCATAATTA",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F F12C D68G I80N",4
"lib1","SARS-CoV-2","GCCATCCCCGCCAGAG",1,68.65,10.85,0.08,0.07,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCATCGCTATAAGGG",3,98.72,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F62V C102Q F160I",3
"lib1","SARS-CoV-2","GCCATCGCTTTGCAGG",4,1.42,NA,NA,NA,NA,NA,NA,"stop","K132T S184*",2
"lib1","SARS-CoV-2","GCCATCTAACGAATAG",1,6.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L57R P96F K198L",3
"lib1","SARS-CoV-2","GCCATCTAAGATTACG",4,77.69,7.92,-2.85,0.19,1.77,1.24,0.01,">1 nonsynonymous","T55W K87V G146L A190I",4
"lib1","SARS-CoV-2","GCCATCTCAACCTAAA",10,174.73,10.48,-0.29,0.04,2.91,1.04,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","GCCATCTTAGGTCAAG",9,109.86,9.59,-1.17,0.13,1.79,1.13,0.01,">1 nonsynonymous","G9I F17S",2
"lib1","SARS-CoV-2","GCCATCTTGTATCAAG",12,41.84,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A14H V103P Y119I",3
"lib1","SARS-CoV-2","GCCATGAAAAAAGCAA",3,35.44,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6Y V11T Y50V F62A Y175T",5
"lib1","SARS-CoV-2","GCCATGAACGCATCTG",5,52.23,9.32,-1.45,0.12,2.24,1.19,0.01,">1 nonsynonymous","Y39R Y91A Y121H P197L",4
"lib1","SARS-CoV-2","GCCATGAATGGCCAGT",1,26.96,7.49,-3.27,0.22,1.94,1.08,0.02,">1 nonsynonymous","I104C F160H Y175L",3
"lib1","SARS-CoV-2","GCCATGACGGTGGTGC",4,9.81,9.87,-0.9,0.16,2.38,1,0.01,">1 nonsynonymous","V37L S45P D98S V115R E154A",5
"lib1","SARS-CoV-2","GCCATGATAGATACCG",2,22.42,7,-3.76,0.3,1.5,1.13,0.02,">1 nonsynonymous","N118D Y143S",2
"lib1","SARS-CoV-2","GCCATGATCCAATCCT",8,31.86,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","V103F V153A",2
"lib1","SARS-CoV-2","GCCATGATTATCAAAA",7,107.26,10.79,0.03,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCATGCAAATAGAAG",6,28.69,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A14P A105K",2
"lib1","SARS-CoV-2","GCCATGCATGTACAAA",17,259.01,10.61,-0.16,0.04,2.9,1.05,0,">1 nonsynonymous","K56S A190C",2
"lib1","SARS-CoV-2","GCCATGGGTCTAGCAT",4,8.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","GCCATTAACAGCTCTT",10,59.44,10.09,-0.68,0.13,2.13,1.04,0.01,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","GCCATTAAGACCACGA",5,77.5,8.59,-2.18,0.11,2.59,1.11,0.01,">1 nonsynonymous","C6S Y123H T170Q",3
"lib1","SARS-CoV-2","GCCATTAAGCTCTTGC",5,20.26,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P96H C102D N157L",3
"lib1","SARS-CoV-2","GCCATTAAGGTGTACA",9,103.32,10.66,-0.11,0.06,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCATTACACGCAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* T15N G51W T63L Y93N I142E C150E C158I",8
"lib1","SARS-CoV-2","GCCATTACCTGATTTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C6R Y50N F70G S113*",4
"lib1","SARS-CoV-2","GCCATTATCCGAGGAT",14,133.46,8.82,-1.95,0.11,1.65,1.13,0,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","GCCATTATTGCATTTA",1,37.56,10.35,-0.41,0.08,2.82,1,0,">1 nonsynonymous","E135K V153N",2
"lib1","SARS-CoV-2","GCCATTCACCCAGGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* L38S P96I E154V",4
"lib1","SARS-CoV-2","GCCATTCCCATAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* C61R P82M V103Q R127D",5
"lib1","SARS-CoV-2","GCCATTCCTTGATCAT",7,136.15,10.02,-0.74,0.05,2.69,1.04,0,">1 nonsynonymous","C6S G83K",2
"lib1","SARS-CoV-2","GCCATTCGCCCACCAA",7,0.91,NA,NA,NA,NA,NA,NA,"stop","I2G F8L I72* D97*",4
"lib1","SARS-CoV-2","GCCATTCTAGCCTAAG",4,0.14,NA,NA,NA,NA,NA,NA,"stop","E10* Y91V E141G",3
"lib1","SARS-CoV-2","GCCATTCTCTGCAACT",7,60.18,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","A14V V103C",2
"lib1","SARS-CoV-2","GCCATTGAAACCGACT",2,26.16,8.89,-1.88,0.11,2.79,1.14,0.01,">1 nonsynonymous","N4L I28F G146V",3
"lib1","SARS-CoV-2","GCCATTGATTAAGTAC",1,10.69,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","W23V T46D",2
"lib1","SARS-CoV-2","GCCATTGGGCCAAAGT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","N1* A42G Y50M A89P",4
"lib1","SARS-CoV-2","GCCATTTAAACGCCTT",1,29.65,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T3P S36F E76G Y93I",4
"lib1","SARS-CoV-2","GCCATTTAACTTATTG",12,193.05,10.55,-0.21,0.04,2.92,1.03,0,">1 nonsynonymous","P7N V11F F12L Y35M",4
"lib1","SARS-CoV-2","GCCATTTAAGTCAGAC",7,39.66,8.85,-1.91,0.2,1.5,1.09,0.02,">1 nonsynonymous","Y50C N64V",2
"lib1","SARS-CoV-2","GCCATTTTCCCAGCAT",2,16.49,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","G83E N92M N130F K198A",4
"lib1","SARS-CoV-2","GCCCAAAAGGAGGTCC",2,40.24,10.73,-0.03,0.06,2.98,1.03,0,">1 nonsynonymous","L5W T55S",2
"lib1","SARS-CoV-2","GCCCAAACATTCATCT",5,49.07,8.98,-1.78,0.16,1.9,1.18,0.01,">1 nonsynonymous","N64R P149R P161E",3
"lib1","SARS-CoV-2","GCCCAAACCAAGAGCA",4,3.93,NA,NA,NA,NA,NA,NA,"stop","N4* E10A I88F S113* Y121V V181C",6
"lib1","SARS-CoV-2","GCCCAAACCCAAAAGA",2,9.21,6,-4.76,2,3,1.16,0,">1 nonsynonymous","E10T S29T K48T K94P I104S G172L",6
"lib1","SARS-CoV-2","GCCCAAACGAACTTAT",1,1.05,NA,NA,NA,NA,NA,NA,"stop","T15* N110R S164F",3
"lib1","SARS-CoV-2","GCCCAAAGCTACCGCT",2,15.3,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","R25F S45K N92L",3
"lib1","SARS-CoV-2","GCCCAAATATTAAATA",4,35.24,9.89,-0.87,0.13,1.8,1,0.01,">1 nonsynonymous","G9P E135M E141P T201V",4
"lib1","SARS-CoV-2","GCCCAAATGAAAAATT",5,79.53,10.89,0.13,0.09,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCAACATATTGTTG",4,74.29,6,-4.76,1.39,1.5,1.15,0.01,">1 nonsynonymous","N24E P161F",2
"lib1","SARS-CoV-2","GCCCAACATTCATCGT",3,35.47,9.62,-1.14,0.11,2.71,1.11,0,">1 nonsynonymous","P7S N118S",2
"lib1","SARS-CoV-2","GCCCAACCCGTATACG",1,7.35,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","P96E N157H V180M",3
"lib1","SARS-CoV-2","GCCCAACTCAGCCCAC",4,21.51,8.01,-2.76,0.29,1.5,1.14,0.03,">1 nonsynonymous","Y66S D98V G166K",3
"lib1","SARS-CoV-2","GCCCAACTTCAAATTA",1,34.77,10.8,0.03,0.05,2.98,1.02,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","GCCCAACTTCCAACAT",5,25.55,6.24,-4.52,0.78,1.5,1.18,0.03,">1 nonsynonymous","Y91R E135H I142K",3
"lib1","SARS-CoV-2","GCCCAAGACTAACAGT",1,14.59,10.72,-0.05,0.1,2.9,1.06,0,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","GCCCAAGCACGTAAAA",12,143.59,10.72,-0.04,0.06,2.88,1.06,0,"1 nonsynonymous","V153A",1
"lib1","SARS-CoV-2","GCCCAAGCCCGAGGTT",4,58.36,10.05,-0.72,0.07,2.89,1.04,0,"1 nonsynonymous","R73T",1
"lib1","SARS-CoV-2","GCCCAAGCTTTCTACT",3,10.92,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","S41F K94V S113P",3
"lib1","SARS-CoV-2","GCCCAAGGACGCCATT",1,32.42,6,-4.76,1.78,1.5,1.11,0.01,">1 nonsynonymous","K87S C150R C158F",3
"lib1","SARS-CoV-2","GCCCAAGGCCAGCCCA",4,142.15,10.07,-0.7,0.07,2.27,1,0,">1 nonsynonymous","F17S Y39L",2
"lib1","SARS-CoV-2","GCCCAAGGCCTGCTTT",3,48.9,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G101L F126V F134Y V173G",4
"lib1","SARS-CoV-2","GCCCAATACAAAGCTA",3,0.44,NA,NA,NA,NA,NA,NA,"stop","N24R S69L K87G D98* C102R G116*",6
"lib1","SARS-CoV-2","GCCCAATATCGAGACC",1,16.61,10.53,-0.23,0.11,2.8,1.12,0.01,"1 nonsynonymous","V20P",1
"lib1","SARS-CoV-2","GCCCAATCAATACACA",2,61.71,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55S N107R N171K P177R",4
"lib1","SARS-CoV-2","GCCCAATGATAATTAC",1,16.84,8.68,-2.08,0.29,1.5,1.07,0.04,">1 nonsynonymous","N24G S53D Y93L",3
"lib1","SARS-CoV-2","GCCCACACCCACCCCA",5,41.03,9.95,-0.81,0.09,2.01,1.05,0.01,">1 nonsynonymous","A33D A89S",2
"lib1","SARS-CoV-2","GCCCACACGCAAATTT",4,18.56,6,-4.76,2,3,1.23,0.01,"1 nonsynonymous","V103R",1
"lib1","SARS-CoV-2","GCCCACAGCCTCAAGT",2,20.62,6.57,-4.19,0.25,1.5,1.05,0.01,">1 nonsynonymous","G51R N107I Y178S",3
"lib1","SARS-CoV-2","GCCCACATATCCGAAT",2,75.06,10.22,-0.55,0.09,2.69,1.04,0,">1 nonsynonymous","L5P S45I",2
"lib1","SARS-CoV-2","GCCCACCAACAGAACT",6,52.53,10.75,-0.02,0.05,2.89,1.07,0,">1 nonsynonymous","Y39G L122Q",2
"lib1","SARS-CoV-2","GCCCACCAAGACAAAC",11,136.49,10.29,-0.48,0.04,2.94,1,0,">1 nonsynonymous","K56N G116A P149V",3
"lib1","SARS-CoV-2","GCCCACCACTAAAGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","T3A A14F I72* K199L",4
"lib1","SARS-CoV-2","GCCCACCCGGAGACAG",1,20.45,6.24,-4.52,0.64,1.5,1.09,0.02,">1 nonsynonymous","A14M R127V",2
"lib1","SARS-CoV-2","GCCCACGAAGACGCCA",8,1.69,NA,NA,NA,NA,NA,NA,"stop","F47* I88R I104H Q144W",4
"lib1","SARS-CoV-2","GCCCACGACAAACCAA",4,38.55,10.65,-0.11,0.03,2.94,1.03,0,"1 nonsynonymous","K114S",1
"lib1","SARS-CoV-2","GCCCACGATAATCTGT",5,1.24,NA,NA,NA,NA,NA,NA,"stop","P7* A42G A190F",3
"lib1","SARS-CoV-2","GCCCACGTCCCCTATA",12,63.32,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","G83S V103K",2
"lib1","SARS-CoV-2","GCCCACTGATAAAATT",2,32.26,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K94S A105L",2
"lib1","SARS-CoV-2","GCCCACTGTATGGAAT",1,34.47,10.35,-0.42,0.04,2.97,1,0,">1 nonsynonymous","S29L C61V",2
"lib1","SARS-CoV-2","GCCCAGAAGATTGGCA",1,19.18,6,-4.76,1.95,1.5,1.16,0.02,"1 nonsynonymous","F167A",1
"lib1","SARS-CoV-2","GCCCAGAAGGTATACT",1,8.71,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","GCCCAGACGACTATTA",5,48.3,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S19K N64V P96R",3
"lib1","SARS-CoV-2","GCCCAGAGAGCGACAT",4,3.26,NA,NA,NA,NA,NA,NA,"stop","K56* A81Q K87A P96I N171Q",5
"lib1","SARS-CoV-2","GCCCAGATCCGATCTA",12,192.8,10.12,-0.64,0.07,2.73,1.02,0,">1 nonsynonymous","C6I T201Q",2
"lib1","SARS-CoV-2","GCCCAGCAATAAATAA",4,51.92,9.53,-1.24,0.11,2.3,1.09,0,">1 nonsynonymous","A81K N130H P169Y",3
"lib1","SARS-CoV-2","GCCCAGCCATATAACA",10,48.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N107I R179S",2
"lib1","SARS-CoV-2","GCCCAGCCGATGACGT",6,103.69,10.75,-0.02,0.07,2.67,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCAGCCTGTGATAC",2,29.35,9.52,-1.24,0.12,2.71,1.16,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","GCCCAGCTTACAACCG",2,10.33,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4I A89L C102M G146L F156P",5
"lib1","SARS-CoV-2","GCCCAGGCGGGTGAGC",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I N64M L95T",3
"lib1","SARS-CoV-2","GCCCAGTCATAGTATA",2,6.48,6.52,-4.24,1.84,3,1.05,0,">1 nonsynonymous","P96W I104Y L162R",3
"lib1","SARS-CoV-2","GCCCAGTCGTCCCCTT",4,12.7,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15G L162E T201V",3
"lib1","SARS-CoV-2","GCCCAGTTCCAAACTT",6,106.85,10.77,0,0.05,2.92,1.03,0,">1 nonsynonymous","E141D L188I",2
"lib1","SARS-CoV-2","GCCCATAAATCTGTTC",2,8.84,10.04,-0.73,0.15,2.76,1,0.01,">1 nonsynonymous","P7S A105V",2
"lib1","SARS-CoV-2","GCCCATAAATTATACA",1,21.5,10.29,-0.47,0.1,2.83,1.03,0,">1 nonsynonymous","I138P A190F",2
"lib1","SARS-CoV-2","GCCCATAACAAAGCGT",5,17.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y93H K114R E141R",3
"lib1","SARS-CoV-2","GCCCATAACCCCACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39D N58F G152I",3
"lib1","SARS-CoV-2","GCCCATAATCATATAC",4,54.98,10.88,0.12,0.09,2.92,1.04,0,">1 nonsynonymous","L5S R27L",2
"lib1","SARS-CoV-2","GCCCATACATACTTCG",1,37.37,9.62,-1.14,0.15,1.79,1.14,0.01,">1 nonsynonymous","N13I V37N",2
"lib1","SARS-CoV-2","GCCCATACATCACCCG",8,103.81,10.77,0.01,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCATAGAACGACTT",3,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D D97V V103K",3
"lib1","SARS-CoV-2","GCCCATAGTAATAACA",5,50.94,6,-4.76,0.79,1.5,1.14,0.01,">1 nonsynonymous","R73S G155V G166V Y178L",4
"lib1","SARS-CoV-2","GCCCATATTAATTGAA",1,88,10.68,-0.09,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCATCTAGAGAATT",4,69.45,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48L P96R Q176D",3
"lib1","SARS-CoV-2","GCCCATGATTAAGTTT",3,46.54,10.72,-0.04,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCATGCATTGAGCC",4,40.23,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L60H I88Y",2
"lib1","SARS-CoV-2","GCCCATGCCCATCTTG",1,28.54,10.32,-0.44,0.05,2.88,1,0,">1 nonsynonymous","T55I D90S S139G",3
"lib1","SARS-CoV-2","GCCCATGCTATCACGG",1,31.22,6.11,-4.65,0.71,1.5,1.17,0.02,">1 nonsynonymous","I28R S36L K87H V115G I138V P169R",6
"lib1","SARS-CoV-2","GCCCATGGAAATTAGA",1,13.8,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","P7V V32G D90H N118T",4
"lib1","SARS-CoV-2","GCCCATGTAAGATCCT",3,81.92,10.77,0,0.05,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCATGTTCACGCAG",3,12.9,6,-4.76,2,1.66,1.31,0.03,">1 nonsynonymous","Y35N D90I Y143N T148D",4
"lib1","SARS-CoV-2","GCCCATTAAGCCACAT",5,74.1,9.89,-0.87,0.05,2.89,1.04,0,">1 nonsynonymous","Y119K E141Q",2
"lib1","SARS-CoV-2","GCCCATTCTGACAAAT",3,34.23,9.11,-1.65,0.07,2.71,1.09,0,">1 nonsynonymous","T3S C61P T170L",3
"lib1","SARS-CoV-2","GCCCATTGATAGAATA",3,6115.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64T I88G N92R L122K N151H",5
"lib1","SARS-CoV-2","GCCCATTGCTGCTAGA",2,76.54,10.15,-0.61,0.05,2.67,1.01,0,">1 nonsynonymous","P7R T100L A105Y",3
"lib1","SARS-CoV-2","GCCCCAAATCACTAAC",4,74.45,9.8,-0.97,0.08,2.19,1.05,0,">1 nonsynonymous","C61V T85I A105Y",3
"lib1","SARS-CoV-2","GCCCCAACTTGTGTCT",1,11.19,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P82T T100R G101D",3
"lib1","SARS-CoV-2","GCCCCAAGCCTTCAGG",1,32.46,10.65,-0.11,0.07,2.92,1.03,0,">1 nonsynonymous","S41Q D97M",2
"lib1","SARS-CoV-2","GCCCCAAGGTAAGTGC",2,26.55,9.92,-0.84,0.1,2.52,1.03,0,">1 nonsynonymous","G9W Y91A",2
"lib1","SARS-CoV-2","GCCCCAATATCACCTT",4,101.96,7.43,-3.33,0.28,1.5,1.2,0.02,">1 nonsynonymous","C6M E10K K87Q L125R",4
"lib1","SARS-CoV-2","GCCCCAATTGATCATA",2,68.93,10.05,-0.71,0.04,2.88,1.07,0,">1 nonsynonymous","L38F V115W P149L",3
"lib1","SARS-CoV-2","GCCCCACATTCCCACA",2,30.49,10.56,-0.2,0.11,2.9,1.09,0,"1 nonsynonymous","T3H",1
"lib1","SARS-CoV-2","GCCCCACCATCCTAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","T15C V65W K87N G101N G155*",5
"lib1","SARS-CoV-2","GCCCCACCTACCTAGC",2,77.92,10.78,0.01,0.06,2.88,1.08,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","GCCCCACTAGCAGATT",3,0.51,NA,NA,NA,NA,NA,NA,"stop","F8N C61*",2
"lib1","SARS-CoV-2","GCCCCAGCATTAGAGC",10,70.05,10.73,-0.04,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCCAGCCAACTCAT",4,16.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y93V L122R",2
"lib1","SARS-CoV-2","GCCCCAGCCATCTACT",1,17.36,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K56M P96N K128Q Y143R",4
"lib1","SARS-CoV-2","GCCCCAGGGATTCGCG",5,80.19,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","T63H V103C R136Q",3
"lib1","SARS-CoV-2","GCCCCATAACTTGTTA",3,18.31,10.57,-0.2,0.1,2.95,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCCATACGTATTTA",1,37.97,10.5,-0.27,0.03,2.91,1.02,0,">1 nonsynonymous","E10G T63R",2
"lib1","SARS-CoV-2","GCCCCATCGATGAGTT",4,37.16,8.94,-1.83,0.12,2.86,1.08,0.01,">1 nonsynonymous","D90E G117A",2
"lib1","SARS-CoV-2","GCCCCATTAACTTGTC",3,17.79,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14R Y159A Y165T",3
"lib1","SARS-CoV-2","GCCCCATTTAATCAAA",7,1.45,NA,NA,NA,NA,NA,NA,"stop","V32K G116N Q144*",3
"lib1","SARS-CoV-2","GCCCCCAAATCAGTCT",1,38.24,8.86,-1.9,0.14,2.54,1.23,0.01,"1 nonsynonymous","A145N",1
"lib1","SARS-CoV-2","GCCCCCAAATCATTGT",2,23.88,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","K48R D98V V180S",3
"lib1","SARS-CoV-2","GCCCCCAAGAAAATAC",1,0.78,NA,NA,NA,NA,NA,NA,"stop","L57D G83*",2
"lib1","SARS-CoV-2","GCCCCCAAGGACATAA",1,40.13,8.65,-2.11,0.14,2.68,1.04,0.01,">1 nonsynonymous","L5G Y35V R73H",3
"lib1","SARS-CoV-2","GCCCCCAAGTGTTGAC",10,277.74,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","K56G G83S Y175I",3
"lib1","SARS-CoV-2","GCCCCCAATGTATAAA",6,51.36,6,-4.76,0.99,1.5,1.14,0.02,">1 nonsynonymous","P7S F47I V103N R127W",4
"lib1","SARS-CoV-2","GCCCCCACACAACGCT",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96G Y143V P169Y",3
"lib1","SARS-CoV-2","GCCCCCCAGCCTATCA",3,64.96,10.69,-0.07,0.05,2.95,1.01,0,">1 nonsynonymous","E10Q V37M V153I",3
"lib1","SARS-CoV-2","GCCCCCCGATAGTACC",3,50.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T63R K94V S113E Y123I",4
"lib1","SARS-CoV-2","GCCCCCCGTCAAATGA",5,57.57,10.15,-0.61,0.08,2.7,1.09,0,">1 nonsynonymous","P7S S45M",2
"lib1","SARS-CoV-2","GCCCCCGATGAACATC",1,100.19,9.77,-1,0.05,2.75,1.04,0,">1 nonsynonymous","T15S C61S V115W F156L",4
"lib1","SARS-CoV-2","GCCCCCGCAGGGGAAC",9,87.55,8.46,-2.3,0.16,1.58,1.15,0.01,">1 nonsynonymous","C61S Y123T N151V",3
"lib1","SARS-CoV-2","GCCCCCGCTAAATAAA",2,58.75,10.76,0,0.06,2.9,1.06,0,"1 nonsynonymous","C195F",1
"lib1","SARS-CoV-2","GCCCCCGTAGACGTCT",4,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V V103N G117E",3
"lib1","SARS-CoV-2","GCCCCCTCGAAATAAC",7,150.78,10.04,-0.73,0.12,2.32,1.01,0,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","GCCCCGAAAGCGAGAT",2,132.19,10.77,0,0.06,2.93,1.03,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","GCCCCGAACAGTACCT",6,4.72,NA,NA,NA,NA,NA,NA,"stop","V32R A81* G83D",3
"lib1","SARS-CoV-2","GCCCCGAACGACTTAA",3,7.12,8.92,-1.85,0.23,1.51,1.4,0.02,">1 nonsynonymous","L5V Y121E",2
"lib1","SARS-CoV-2","GCCCCGACGAACAAAA",1,6.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89W F99T V103L P169S",4
"lib1","SARS-CoV-2","GCCCCGATAGTCTGTA",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I E154G",2
"lib1","SARS-CoV-2","GCCCCGATATGCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39Q I104G",2
"lib1","SARS-CoV-2","GCCCCGATGTCCCTAC",6,127.62,10.71,-0.06,0.06,2.89,1.07,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GCCCCGCCAGCTCAAT",3,78.31,10.64,-0.12,0.07,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCCGCGATCCTCTG",6,89.04,9.58,-1.19,0.05,2.91,1.06,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","GCCCCGTTACTAGAAC",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141S S147F P161H",3
"lib1","SARS-CoV-2","GCCCCTAAACGAAAAT",5,43.16,10.42,-0.34,0.04,2.83,1.01,0,">1 nonsynonymous","S29P T140V",2
"lib1","SARS-CoV-2","GCCCCTAACTCAGTAA",4,39.8,10.85,0.08,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCCTAAGTGAATCA",11,117.35,6,-4.76,1.33,1.5,1.15,0.02,">1 nonsynonymous","F99M R179T",2
"lib1","SARS-CoV-2","GCCCCTACGAGCAATG",3,16.99,9.3,-1.47,0.33,2.07,1.03,0.06,">1 nonsynonymous","T85C V173S",2
"lib1","SARS-CoV-2","GCCCCTCAACAGTCCC",2,44.86,8.63,-2.14,0.08,2.93,1.09,0,">1 nonsynonymous","K87L G117N F134L T201K",4
"lib1","SARS-CoV-2","GCCCCTCATGAACGAG",2,10.26,6.2,-4.57,0.34,3,1.13,0,">1 nonsynonymous","L5A N13R V37A V77M G117P Q176L",6
"lib1","SARS-CoV-2","GCCCCTCTGTACGCGA",3,14.23,9.82,-0.94,0.19,2.08,1.01,0.03,">1 nonsynonymous","R27A W106R",2
"lib1","SARS-CoV-2","GCCCCTGAAATTAAAA",5,73.71,10.59,-0.18,0.04,2.84,1.13,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","GCCCCTGACTTGCATG",8,34.09,9.85,-0.91,0.18,2.11,1.13,0.01,">1 nonsynonymous","C61L D97N N107A",3
"lib1","SARS-CoV-2","GCCCCTGCATGTCTAA",9,27.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D34H T63H G86V R136P",4
"lib1","SARS-CoV-2","GCCCCTGGTAAAGGGA",2,17.75,10.66,-0.1,0.07,2.91,1.02,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","GCCCCTGGTCGTACAT",5,57.43,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F70I Q84T Y123L G146E Y178P",5
"lib1","SARS-CoV-2","GCCCCTTAAACATTGC",1,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T C61T N107S K199R",4
"lib1","SARS-CoV-2","GCCCCTTAACGTACCG",3,2.36,NA,NA,NA,NA,NA,NA,"stop","F17V R25S S41Q A67G G101* E135W Y178I",7
"lib1","SARS-CoV-2","GCCCCTTATTGCACTA",4,0.58,NA,NA,NA,NA,NA,NA,"stop","A105R D112*",2
"lib1","SARS-CoV-2","GCCCCTTGTAAGCTAA",5,145.01,10.77,0.01,0.06,2.92,1.03,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","GCCCGAAAAGCCTAAC",3,42.6,9.96,-0.8,0.12,2.52,1.04,0.01,">1 nonsynonymous","V52Q Q84T",2
"lib1","SARS-CoV-2","GCCCGAAACTCGGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5K Y35R D97S S113R S184* A192E",6
"lib1","SARS-CoV-2","GCCCGAAATACGGTCG",5,50.1,10.85,0.08,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCCGAATATTGCAGT",3,43.36,10.15,-0.61,0.06,2.73,1.02,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","GCCCGAATCAAAGAAA",5,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V D112K L131W P149L C158Q Q168L",6
"lib1","SARS-CoV-2","GCCCGACATGGGACAA",2,36.28,10.41,-0.36,0.06,2.83,1.01,0,">1 nonsynonymous","S19P S129L",2
"lib1","SARS-CoV-2","GCCCGACATTGGCAAC",1,30.43,8.15,-2.62,0.17,1.95,1.06,0.01,">1 nonsynonymous","W106V Y119D",2
"lib1","SARS-CoV-2","GCCCGACGAACCAACA",2,16.5,10.74,-0.02,0.05,3,1,0,"1 nonsynonymous","P149V",1
"lib1","SARS-CoV-2","GCCCGACGCACTGATG",2,14.4,6.31,-4.46,0.6,1.5,1.03,0.04,">1 nonsynonymous","Y93S D98V Q176M",3
"lib1","SARS-CoV-2","GCCCGAGATAGTACGG",4,40.38,6,-4.76,2,1.5,1.11,0.06,">1 nonsynonymous","K56R D68Y K87G F99N S113C",5
"lib1","SARS-CoV-2","GCCCGAGCAGGTCCCC",2,37.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S R25E Q144R A192R",4
"lib1","SARS-CoV-2","GCCCGAGTGTGCGCAT",4,28.54,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","P96Q G152N Y165R",3
"lib1","SARS-CoV-2","GCCCGATACTCTCTCA",10,55.27,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V11C F47L P82V G86R P96S R136C Y143K A190N",8
"lib1","SARS-CoV-2","GCCCGATAGTCACATG",6,121.6,10.42,-0.34,0.04,2.88,1.07,0,">1 nonsynonymous","N151P K199R",2
"lib1","SARS-CoV-2","GCCCGATATACTAATA",6,25.32,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","K87S Y93P T201M",3
"lib1","SARS-CoV-2","GCCCGCAAAAAGTGCA",7,148.5,10.13,-0.64,0.08,2.26,1.04,0,">1 nonsynonymous","S29L T46N V173R",3
"lib1","SARS-CoV-2","GCCCGCAATACCCGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6S G83T N107M K114F F126G T148S S200*",7
"lib1","SARS-CoV-2","GCCCGCACACATTCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* W106L Y165L G174R",4
"lib1","SARS-CoV-2","GCCCGCAGATACTAAA",10,145.9,10.77,0,0.04,2.93,1.02,0,">1 nonsynonymous","Y39H P197E",2
"lib1","SARS-CoV-2","GCCCGCATATGGATGT",5,15.59,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25F Y91V Y121L",3
"lib1","SARS-CoV-2","GCCCGCATGACACACT",3,71.34,6.29,-4.48,0.66,1.5,1.16,0.03,">1 nonsynonymous","C61N D68L L122N I142M",4
"lib1","SARS-CoV-2","GCCCGCCACTGTTAAC",7,185.51,10.77,0,0.06,2.92,1.05,0,"1 nonsynonymous","K198C",1
"lib1","SARS-CoV-2","GCCCGCCCCGCGTCCA",7,139.59,10.75,-0.01,0.06,2.96,1.02,0,"1 nonsynonymous","N110M",1
"lib1","SARS-CoV-2","GCCCGCCCGCTCAACA",11,180.23,8.1,-2.66,0.12,1.5,1.07,0,">1 nonsynonymous","F12W T55G D97V N157G",4
"lib1","SARS-CoV-2","GCCCGCGGGCGATTAA",6,164.38,10.59,-0.18,0.04,2.93,1.01,0,">1 nonsynonymous","K128G G155A",2
"lib1","SARS-CoV-2","GCCCGCTATCAGGGGT",2,5.73,10.19,-0.58,0.13,2.75,1.16,0.01,"1 nonsynonymous","T15I",1
"lib1","SARS-CoV-2","GCCCGCTATTCCTTTA",3,137.93,10.81,0.05,0.06,2.95,1.01,0,"1 nonsynonymous","Y39A",1
"lib1","SARS-CoV-2","GCCCGGAGACCTTATA",7,0.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","GCCCGGCGGGTAAAAA",4,87.54,9.92,-0.85,0.11,2.06,1.04,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","GCCCGGGATTCTACGT",4,53.78,10.19,-0.57,0.09,2.74,1,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","GCCCGGGCCTCTTAAA",3,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K K26L A42T W106R I138G E154Q R179M",7
"lib1","SARS-CoV-2","GCCCGGTGCGAAGGCG",2,9.25,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15N A42D T55C K94F A105L Q144L",6
"lib1","SARS-CoV-2","GCCCGTAAATAACGGG",2,18.62,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","K48P W106V P149F",3
"lib1","SARS-CoV-2","GCCCGTAACTGCAAAA",2,8.56,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S41N N92P",2
"lib1","SARS-CoV-2","GCCCGTAATAAAAATT",3,45.01,9.44,-1.32,0.21,1.76,1.13,0.02,">1 nonsynonymous","K56L F62R G152L",3
"lib1","SARS-CoV-2","GCCCGTAATAGCGCTT",9,88.48,6.09,-4.67,1.01,1.5,1.23,0.02,">1 nonsynonymous","W106L I138N N151P",3
"lib1","SARS-CoV-2","GCCCGTACTAACTCGC",1,0.92,NA,NA,NA,NA,NA,NA,"stop","F8* C61A D90T L125S L131R",5
"lib1","SARS-CoV-2","GCCCGTCCCCTAACAC",2,6.33,10.46,-0.3,0.21,2.38,1.04,0.02,">1 nonsynonymous","G9R N13C T85S K114V",4
"lib1","SARS-CoV-2","GCCCGTGATTCCTCTG",4,42.92,10.61,-0.15,0.1,2.86,1.09,0,">1 nonsynonymous","T15L V32I",2
"lib1","SARS-CoV-2","GCCCGTTAATTACATT",9,52.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V65D C158V",2
"lib1","SARS-CoV-2","GCCCGTTGGTTGCCGT",1,5.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105G",1
"lib1","SARS-CoV-2","GCCCTAAAATAATAGC",5,46.38,9.61,-1.15,0.13,1.87,1.14,0.01,">1 nonsynonymous","A14M K56W C195F",3
"lib1","SARS-CoV-2","GCCCTAAAGCCAGGAA",3,54.14,8.46,-2.3,0.17,1.87,1.2,0.01,"1 nonsynonymous","D112S",1
"lib1","SARS-CoV-2","GCCCTAAGACAAAGTG",5,1.73,NA,NA,NA,NA,NA,NA,"stop","A33* I88E D97K E135K",4
"lib1","SARS-CoV-2","GCCCTAAGTATTGAAT",3,94.84,6.21,-4.56,0.7,1.5,1.24,0.02,">1 nonsynonymous","N4D Y165R Y175H S184I",4
"lib1","SARS-CoV-2","GCCCTACAGAACATGT",14,225.85,10.78,0.01,0.06,2.87,1.04,0,"1 nonsynonymous","R16Y",1
"lib1","SARS-CoV-2","GCCCTACTCAACCAAA",1,5.12,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","S19V I72G Y121L D137G",4
"lib1","SARS-CoV-2","GCCCTACTGACCCCTA",5,29.05,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I88Y K132T P197A",3
"lib1","SARS-CoV-2","GCCCTAGAGCCGGTCA",5,17.23,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","P54K N92L D97P N130L G152Q P197T",6
"lib1","SARS-CoV-2","GCCCTAGATGGCCCTG",3,32.74,10.88,0.11,0.06,3,1,0,">1 nonsynonymous","L5K N40K",2
"lib1","SARS-CoV-2","GCCCTAGTGACTTCCA",2,35.25,9.88,-0.88,0.12,2.4,1.05,0.01,">1 nonsynonymous","N13Q C61D I142Y",3
"lib1","SARS-CoV-2","GCCCTATTATGTCTAT",1,93.63,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","T3S R16L Y21F T55H F99C I138V H189Y",7
"lib1","SARS-CoV-2","GCCCTATTCACAGCGA",3,54.41,9.03,-1.73,0.18,1.82,1.15,0.01,">1 nonsynonymous","S41L C61R V103M",3
"lib1","SARS-CoV-2","GCCCTATTGGAAACTG",1,25.25,10.63,-0.14,0.06,2.9,1.04,0,"1 nonsynonymous","Q144P",1
"lib1","SARS-CoV-2","GCCCTCAATGTCACAA",7,62.15,6,-4.76,2,3,1.15,0,">1 nonsynonymous","E135N G152I Y165K",3
"lib1","SARS-CoV-2","GCCCTCACCACTCTCC",1,9.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","GCCCTCACTTCGACCA",4,56.1,10.74,-0.03,0.06,2.91,1.05,0,"1 nonsynonymous","P191T",1
"lib1","SARS-CoV-2","GCCCTCCACCCAGTTA",7,63.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S43T C49K K56N R124F",4
"lib1","SARS-CoV-2","GCCCTCCAGCGAAATG",1,22.02,10.19,-0.58,0.09,2.63,1.09,0.01,">1 nonsynonymous","T15E S41V E141M",3
"lib1","SARS-CoV-2","GCCCTCCATGCCACCC",1,78.65,10.03,-0.73,0.08,2.79,1.02,0,">1 nonsynonymous","Q84V K94A L125G",3
"lib1","SARS-CoV-2","GCCCTCCCGTCGACTT",10,126,10.5,-0.27,0.05,2.92,1.03,0,">1 nonsynonymous","F185Y A192N",2
"lib1","SARS-CoV-2","GCCCTCCCTACAACGT",2,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T F167E",2
"lib1","SARS-CoV-2","GCCCTCGAAGGACAAG",3,20.01,7.24,-3.53,0.47,1.5,1.08,0.06,">1 nonsynonymous","C61T N107C S113M K128L Y143F",5
"lib1","SARS-CoV-2","GCCCTCGAGGCACCAA",3,52.48,10.88,0.11,0.06,2.94,1.02,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","GCCCTCGGCTAGTATG",6,123.97,10.77,0.01,0.06,2.92,1.05,0,">1 nonsynonymous","A190T K199V",2
"lib1","SARS-CoV-2","GCCCTCGTACCCGTAC",9,0.78,NA,NA,NA,NA,NA,NA,"stop","L5R F17* R25Y Y35E",4
"lib1","SARS-CoV-2","GCCCTCGTAGTCGTGC",3,58.69,10.24,-0.53,0.05,2.8,1,0,"1 nonsynonymous","S45W",1
"lib1","SARS-CoV-2","GCCCTCTAACACAGAA",1,10.43,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","E10T F17P N120L Y143R",4
"lib1","SARS-CoV-2","GCCCTCTTCATTTAGA",2,128,7.12,-3.65,0.15,1.6,1.15,0.01,">1 nonsynonymous","S139T C150D",2
"lib1","SARS-CoV-2","GCCCTCTTGTAATTTG",3,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L T55F I104K E154M",4
"lib1","SARS-CoV-2","GCCCTCTTTTTAATAG",2,11.92,6.87,-3.89,0.29,1.5,1.01,0.01,">1 nonsynonymous","F44L C102K",2
"lib1","SARS-CoV-2","GCCCTGAATATAAACA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y Y143N G152A",3
"lib1","SARS-CoV-2","GCCCTGACACGCACGT",1,43.67,8.73,-2.03,0.27,1.72,1.08,0.03,">1 nonsynonymous","N151R F167L",2
"lib1","SARS-CoV-2","GCCCTGCAAACAAGGA",1,18.82,6.99,-3.77,0.38,1.5,1.2,0.03,">1 nonsynonymous","C61E P96F G174Q",3
"lib1","SARS-CoV-2","GCCCTGCCACAATATA",8,104.39,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R25V A42T C61F S139G",4
"lib1","SARS-CoV-2","GCCCTGCCCACCTGGG",5,76.01,9.72,-1.05,0.12,1.99,1.02,0.01,">1 nonsynonymous","C6K S129M T201N",3
"lib1","SARS-CoV-2","GCCCTGCCGAAATAAG",12,204.14,7,-3.76,0.14,1.71,1.14,0,">1 nonsynonymous","C31F Y123E K128S",3
"lib1","SARS-CoV-2","GCCCTGCTTTTAAAGT",5,59.12,10.13,-0.63,0.07,2.84,1,0,">1 nonsynonymous","N4V F12M S200M",3
"lib1","SARS-CoV-2","GCCCTGGGGTATAAAA",3,18.21,7.24,-3.53,0.5,1.5,1.18,0.05,">1 nonsynonymous","F17V A89Y",2
"lib1","SARS-CoV-2","GCCCTGGGTTATATAC",7,1.88,NA,NA,NA,NA,NA,NA,"stop","R25K K94M G117* R136A F160W",5
"lib1","SARS-CoV-2","GCCCTTAATGGCACCT",6,93.79,10.67,-0.09,0.03,2.91,1.05,0,">1 nonsynonymous","C61P P149S",2
"lib1","SARS-CoV-2","GCCCTTACGATATACC",1,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72L",1
"lib1","SARS-CoV-2","GCCCTTAGAGTCCAAC",4,55.43,6.67,-4.09,0.52,1.5,1.18,0.03,">1 nonsynonymous","P7T W106I R136W",3
"lib1","SARS-CoV-2","GCCCTTAGCCCGTCAA",1,17.37,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","A81V Y93A",2
"lib1","SARS-CoV-2","GCCCTTAGGTCAAGAC",5,31.53,7.51,-3.25,0.22,1.5,1.12,0.02,">1 nonsynonymous","Y91C F167W",2
"lib1","SARS-CoV-2","GCCCTTAGGTCCTGAG",3,93.98,10.14,-0.63,0.08,2.66,1.02,0,">1 nonsynonymous","Y39R A145V V153R Y178S",4
"lib1","SARS-CoV-2","GCCCTTATACATACTG",6,109.61,10.7,-0.06,0.05,2.97,1,0,">1 nonsynonymous","K114H N130S",2
"lib1","SARS-CoV-2","GCCCTTATATGAATTA",1,4.33,NA,NA,NA,NA,NA,NA,"stop","F8T D59R Q84* L131*",4
"lib1","SARS-CoV-2","GCCCTTATTTAAAACT",13,163.91,10.59,-0.18,0.03,2.91,1.05,0,"1 nonsynonymous","G116D",1
"lib1","SARS-CoV-2","GCCCTTCACAGGAACC",9,146.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35Q P133R Y143D",3
"lib1","SARS-CoV-2","GCCCTTCCTCGCAACT",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F I88L D98W R127H",4
"lib1","SARS-CoV-2","GCCCTTCGCTTAGCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W A33S D98R G116D T170L",5
"lib1","SARS-CoV-2","GCCCTTCTCTGAAAAT",8,50.52,8.36,-2.41,0.15,1.51,1.13,0.01,">1 nonsynonymous","D97I E154I V181L",3
"lib1","SARS-CoV-2","GCCCTTGCTAATGTAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","L60* L95T",2
"lib1","SARS-CoV-2","GCCCTTGCTATCCCCG",3,81.12,10.64,-0.12,0.06,2.86,1.04,0,"1 nonsynonymous","A81R",1
"lib1","SARS-CoV-2","GCCCTTTAGGGTTTCC",7,86.73,6.18,-4.58,0.64,1.5,1.19,0.02,">1 nonsynonymous","A105Y S113Q",2
"lib1","SARS-CoV-2","GCCCTTTGCACTTGTT",4,42.76,10.24,-0.53,0.07,2.82,1,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","GCCCTTTTACTCGCAA",8,159.59,9.99,-0.77,0.05,2.89,1.02,0,">1 nonsynonymous","C61H Y143L",2
"lib1","SARS-CoV-2","GCCCTTTTGAATTGAA",2,18.55,9.94,-0.83,0.09,2.53,1.06,0,">1 nonsynonymous","C6Y F62S",2
"lib1","SARS-CoV-2","GCCGAAAAAATTTCAC",4,75.33,8.35,-2.42,0.14,2.05,1.09,0.01,">1 nonsynonymous","S41F K87T G155L Y178I",4
"lib1","SARS-CoV-2","GCCGAAAACGCTACAA",3,18.23,6.71,-4.05,0.48,1.5,1.18,0.03,">1 nonsynonymous","Y35G L162R",2
"lib1","SARS-CoV-2","GCCGAAACAGGTATAA",2,11.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A33L T85P D90G Y159I T170M",5
"lib1","SARS-CoV-2","GCCGAAACTCATGTTT",2,17.13,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49G C61K N151L",3
"lib1","SARS-CoV-2","GCCGAAACTGGTGATA",7,2.22,NA,NA,NA,NA,NA,NA,"stop","T15S E141*",2
"lib1","SARS-CoV-2","GCCGAAAGCGACAGAC",2,14.03,6.23,-4.54,0.82,1.5,1.08,0.03,">1 nonsynonymous","I88S K128Y",2
"lib1","SARS-CoV-2","GCCGAAAGCTGTTCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10S L38S A42V Y119*",4
"lib1","SARS-CoV-2","GCCGAAAGGATAATAG",8,120.69,10.75,-0.01,0.05,2.92,1.04,0,"1 nonsynonymous","S43R",1
"lib1","SARS-CoV-2","GCCGAACATATTATAT",6,17.89,7.24,-3.53,0.56,2.12,1.27,0.04,">1 nonsynonymous","A42N N107L G116T",3
"lib1","SARS-CoV-2","GCCGAACCCCTGCCCT",2,28.35,8.19,-2.57,0.11,2.79,1.09,0.01,">1 nonsynonymous","Y175A T201D",2
"lib1","SARS-CoV-2","GCCGAACGAAAATCCA",3,36.39,9.51,-1.26,0.09,1.89,1.06,0,">1 nonsynonymous","N4S D34S T46C",3
"lib1","SARS-CoV-2","GCCGAACGAGTGAATG",3,30.49,9.16,-1.61,0.17,1.71,1.09,0.02,">1 nonsynonymous","A22M C61P W106R",3
"lib1","SARS-CoV-2","GCCGAAGAAGTCTACT",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T T15V S19W A42S K87F K94R N118L P149S",8
"lib1","SARS-CoV-2","GCCGAAGGCGCTAGAT",4,0.74,NA,NA,NA,NA,NA,NA,"stop","D112* N130P",2
"lib1","SARS-CoV-2","GCCGAAGTATTCACAA",4,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R D90S L95H N107V P133I T148P",6
"lib1","SARS-CoV-2","GCCGAAGTTTTAACGA",5,97.86,9.82,-0.95,0.06,2.32,1.07,0,">1 nonsynonymous","S41L N107R",2
"lib1","SARS-CoV-2","GCCGAATATTCTGTTT",5,48.43,10.73,-0.04,0.07,2.84,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","GCCGAATTCAGTAGAA",3,14.3,8.69,-2.08,0.17,1.96,1.11,0.02,">1 nonsynonymous","A42P G83F K132M Y165V",4
"lib1","SARS-CoV-2","GCCGACACCATAACGC",2,40.15,6.38,-4.38,0.46,1.5,1.2,0.01,">1 nonsynonymous","I2Y I28S L57H",3
"lib1","SARS-CoV-2","GCCGACCACCGAAGTT",7,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T I104G P149Q",3
"lib1","SARS-CoV-2","GCCGACCCCATCCACG",1,39.35,10.08,-0.69,0.08,2.71,1,0,">1 nonsynonymous","P54E V173P",2
"lib1","SARS-CoV-2","GCCGACCGACGTTACC",11,7.3,NA,NA,NA,NA,NA,NA,"stop","A42C N120Q T170* Q176M",4
"lib1","SARS-CoV-2","GCCGACCTTCACCCAG",12,2.39,NA,NA,NA,NA,NA,NA,"stop","G9* T55S T201R",3
"lib1","SARS-CoV-2","GCCGACGATCCTAGCC",2,61.26,10.29,-0.47,0.07,2.8,1.01,0,"1 nonsynonymous","E186L",1
"lib1","SARS-CoV-2","GCCGACGGCACACTTA",1,165.4,10.17,-0.6,0.06,2.68,1.03,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","GCCGACGTTTTGGTGG",4,65.94,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y21R A33R A105T N110T Y143E Y165S",6
"lib1","SARS-CoV-2","GCCGACTTAACTCATA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","L60V R124* V180L T201S",4
"lib1","SARS-CoV-2","GCCGAGAAAATGCCAT",7,55.88,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G74L T85S R136C Y143L",4
"lib1","SARS-CoV-2","GCCGAGAACTCATAAC",1,26.71,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I88Y E135T",2
"lib1","SARS-CoV-2","GCCGAGAATCAACATT",1,12.31,9.04,-1.73,0.13,2.46,1.19,0.01,">1 nonsynonymous","C61S N118F",2
"lib1","SARS-CoV-2","GCCGAGATCCTGACAT",2,7.35,6.48,-4.29,0.73,1.5,1.03,0.06,">1 nonsynonymous","A81C Y91P W106S",3
"lib1","SARS-CoV-2","GCCGAGATTAACTCTG",3,55.62,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12T D34R I138L Y143R T148E",5
"lib1","SARS-CoV-2","GCCGAGCAGTATACAG",4,55.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V71R N109H S147C",3
"lib1","SARS-CoV-2","GCCGAGCCATCGAGCC",4,45.02,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","D112E Y175L P191H",3
"lib1","SARS-CoV-2","GCCGAGGAAACCCTCC",5,90.1,9.08,-1.68,0.16,1.5,1.12,0.01,">1 nonsynonymous","S29G F44L V77T",3
"lib1","SARS-CoV-2","GCCGAGGCATCGTTAT",9,192.71,8.8,-1.97,0.08,2.68,1.12,0,">1 nonsynonymous","N58I Y119W",2
"lib1","SARS-CoV-2","GCCGAGGGGCTATACA",1,14.57,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T15I W23E",2
"lib1","SARS-CoV-2","GCCGAGTTCGCTTTGA",2,38.92,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12A V32S F70V Y123L K128I I142F Q163P",7
"lib1","SARS-CoV-2","GCCGAGTTTGCGAACC",2,52.89,10.79,0.02,0.05,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GCCGATACAGCCCAAT",3,4.62,NA,NA,NA,NA,NA,NA,"stop","N4K L5V N92* L162E T201K",5
"lib1","SARS-CoV-2","GCCGATAGACCTTACA",3,6.92,NA,NA,NA,NA,NA,NA,"stop","I72K V103*",2
"lib1","SARS-CoV-2","GCCGATATAACCGCAC",6,0.63,NA,NA,NA,NA,NA,NA,"stop","T15F F44* T85K Y119C",4
"lib1","SARS-CoV-2","GCCGATATTATATCGC",1,11.69,8.38,-2.38,0.27,2.25,1.04,0.05,">1 nonsynonymous","P54L D59A V153E Y175C P197K",5
"lib1","SARS-CoV-2","GCCGATATTTAGTGCC",3,82.67,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6P F17D G83E K114M",4
"lib1","SARS-CoV-2","GCCGATCACATATTAC",1,12.72,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6L V103R D137T",3
"lib1","SARS-CoV-2","GCCGATCCAGATAATT",2,29.11,10.21,-0.55,0.15,2.45,1.03,0.01,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","GCCGATGACACTAACT",3,72.51,10.69,-0.07,0.07,2.93,1.05,0,"1 nonsynonymous","D97P",1
"lib1","SARS-CoV-2","GCCGATGGACATATCA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","A14* N24C F62W Y91E R124D",5
"lib1","SARS-CoV-2","GCCGATGTCACACGTA",1,68.45,10.82,0.06,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCGATTAATATAATA",1,29.39,10.54,-0.22,0.08,2.9,1,0,">1 nonsynonymous","L5S E10V",2
"lib1","SARS-CoV-2","GCCGATTATTTTAATG",7,0,NA,NA,NA,NA,NA,NA,"stop","A33* L162V",2
"lib1","SARS-CoV-2","GCCGATTGGGTAAAAA",6,391,8.85,-1.91,0.08,2.54,1.11,0,">1 nonsynonymous","G155R Q176H L187Q",3
"lib1","SARS-CoV-2","GCCGATTTACATTCTC",4,42.28,6,-4.76,1.37,3,1.22,0.01,">1 nonsynonymous","T46Y P54A N92L L111W",4
"lib1","SARS-CoV-2","GCCGCAAACAGGCCTG",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119N G146R T201K",3
"lib1","SARS-CoV-2","GCCGCAAACCGTATAA",2,229.66,6,-4.76,1.66,1.5,1.18,0.01,">1 nonsynonymous","N118I L125H G155V",3
"lib1","SARS-CoV-2","GCCGCAACCGCAACGA",7,196.34,9.29,-1.48,0.06,2.7,1.06,0,">1 nonsynonymous","K87I A105G G152V V173R",4
"lib1","SARS-CoV-2","GCCGCAAGCAATCTGC",8,32.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S43T K56I A81W W106A",4
"lib1","SARS-CoV-2","GCCGCAAGTGCTCATT",8,27.1,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S19E C102S G117K F156S G196R K198V",6
"lib1","SARS-CoV-2","GCCGCAATATTCATTC",11,77.51,6.02,-4.75,1.07,1.5,1.19,0.02,">1 nonsynonymous","Y21K N40L I104Q",3
"lib1","SARS-CoV-2","GCCGCACACCTAAATG",1,45.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V71K L125S Y165K G196L",4
"lib1","SARS-CoV-2","GCCGCACATCTACGAG",2,0.27,NA,NA,NA,NA,NA,NA,"stop","S29* Y35M F47* N92Y F99D D112R I142S",7
"lib1","SARS-CoV-2","GCCGCACGCCTCCATA",3,60.92,7.86,-2.91,0.18,1.85,1.14,0.01,">1 nonsynonymous","C61W L131V Y175S S184V",4
"lib1","SARS-CoV-2","GCCGCAGAGAATATGT",1,12.84,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","E10I L38H L60Y G86E",4
"lib1","SARS-CoV-2","GCCGCATAACTACAAT",5,163.62,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T63Q Q84L D98E Q144P Y165M",5
"lib1","SARS-CoV-2","GCCGCATAAGTACAAA",3,43.86,9.86,-0.9,0.12,2.38,1.16,0.01,">1 nonsynonymous","C61R P96R",2
"lib1","SARS-CoV-2","GCCGCATCCACATCAT",4,54.01,10.8,0.03,0.1,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GCCGCCAATATATAAA",7,91.93,9.66,-1.1,0.11,1.89,1.11,0,">1 nonsynonymous","C31T D98T S108T P197L",4
"lib1","SARS-CoV-2","GCCGCCGCAAGCCTAT",4,129.8,10.13,-0.63,0.05,2.81,1,0,">1 nonsynonymous","C6T A42F S113A",3
"lib1","SARS-CoV-2","GCCGCCGTGCCCCTGT",3,46,9.95,-0.82,0.1,2.37,1.1,0,">1 nonsynonymous","G9S S36L Q84Y T201Y",4
"lib1","SARS-CoV-2","GCCGCCTAATGACAAT",5,57.62,10.55,-0.21,0.08,2.91,1.04,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","GCCGCCTCGCCGCCAA",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F62S",2
"lib1","SARS-CoV-2","GCCGCGAGACGTACCC",1,0.93,NA,NA,NA,NA,NA,NA,"stop","F17* N30S K56S T63S T100R Y119R N157I",7
"lib1","SARS-CoV-2","GCCGCGGACGAAACAG",1,8.12,9.43,-1.33,0.37,2.06,1.03,0.04,">1 nonsynonymous","L95N S113V S184H",3
"lib1","SARS-CoV-2","GCCGCGGAGCCAGGCG",3,96.76,10.89,0.12,0.07,2.9,1.07,0,">1 nonsynonymous","R16N K132S",2
"lib1","SARS-CoV-2","GCCGCGGCTAAACTTA",1,6.87,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5S A14L Y50H D68R K87T S129F",6
"lib1","SARS-CoV-2","GCCGCGGGTATAGAAT",4,43.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K R25N D90Y C158Q",4
"lib1","SARS-CoV-2","GCCGCGTGAGACACAT",7,3.73,NA,NA,NA,NA,NA,NA,"stop","V37E C49* F62A L125V E141* G196S",6
"lib1","SARS-CoV-2","GCCGCTCATTCACGCC",3,69.81,10.64,-0.12,0.04,2.95,1.01,0,">1 nonsynonymous","T55W P149Y",2
"lib1","SARS-CoV-2","GCCGCTGGACAATCTT",2,19.23,10.66,-0.11,0.07,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCGCTGTGCACTGGA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","E10S P133T G155* L162K T201R",5
"lib1","SARS-CoV-2","GCCGGAAAAAATGACC",1,11.64,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","L122A S139I P161L Y175V",4
"lib1","SARS-CoV-2","GCCGGAAAATCCCCCC",8,99.04,6,-4.76,1.44,1.5,1.16,0.01,">1 nonsynonymous","A14R P54V V115L Y159C",4
"lib1","SARS-CoV-2","GCCGGAAATCCGAAAT",4,88.88,10.75,-0.01,0.05,2.96,1.03,0,"1 nonsynonymous","N110S",1
"lib1","SARS-CoV-2","GCCGGAAGCTGAGCAT",9,926.08,6.79,-3.97,0.21,1.5,1.14,0.01,">1 nonsynonymous","D97F Y119A I142K",3
"lib1","SARS-CoV-2","GCCGGACAATAACATC",6,82.28,9.82,-0.95,0.11,1.99,1.01,0,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","GCCGGCAAAACACCGT",8,111.82,10.55,-0.22,0.03,2.93,1.02,0,"1 nonsynonymous","L125W",1
"lib1","SARS-CoV-2","GCCGGCAGGCTACTAA",4,27.81,10.63,-0.14,0.07,2.79,1.17,0,">1 nonsynonymous","G152S A190S",2
"lib1","SARS-CoV-2","GCCGGCCCGGATGTTC",8,101.1,8.31,-2.45,0.21,1.5,1.17,0.02,">1 nonsynonymous","F44I L57H G174W",3
"lib1","SARS-CoV-2","GCCGGCGGAAGCTATC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* D34Y Y178L",3
"lib1","SARS-CoV-2","GCCGGCGGATCTAATG",3,25.27,10.15,-0.61,0.06,2.93,1.01,0,">1 nonsynonymous","L122S F156T",2
"lib1","SARS-CoV-2","GCCGGCTATAATGCTA",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F P96S K198N",3
"lib1","SARS-CoV-2","GCCGGCTCAGATACCG",1,10.33,10.72,-0.05,0.11,2.91,1.05,0,"1 nonsynonymous","F134W",1
"lib1","SARS-CoV-2","GCCGGGATATTATTGA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N W106R T201A",3
"lib1","SARS-CoV-2","GCCGGGCTATTCCTCC",3,8.09,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N13G F62P P96K Y143S T148G",5
"lib1","SARS-CoV-2","GCCGGGGACTGACAAA",1,12.26,10.13,-0.64,0.27,2.62,1.12,0.04,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","GCCGGGGGTCTATGCA",13,123.65,10.66,-0.11,0.03,2.92,1.04,0,">1 nonsynonymous","I2P G155A",2
"lib1","SARS-CoV-2","GCCGGGGTTGAAACTT",5,12.11,6,-4.76,2,3,1.06,0,">1 nonsynonymous","R124N I138W V173G",3
"lib1","SARS-CoV-2","GCCGGTAAAAAGAGTT",3,28.44,9.85,-0.91,0.09,2.83,1.03,0,"1 nonsynonymous","P169G",1
"lib1","SARS-CoV-2","GCCGGTAATGATTAAA",6,0.23,NA,NA,NA,NA,NA,NA,"stop","I88N K94L W106* S139Y F167L",5
"lib1","SARS-CoV-2","GCCGGTACATGTCAAT",1,34.34,9.49,-1.28,0.25,1.64,1.19,0.03,">1 nonsynonymous","E10Y V173S",2
"lib1","SARS-CoV-2","GCCGGTATAGTCACAG",3,28.4,10.24,-0.52,0.12,2.61,1.08,0.01,">1 nonsynonymous","E10R K94H",2
"lib1","SARS-CoV-2","GCCGGTGACTGTATTA",2,7.43,8.56,-2.21,0.21,1.5,1.08,0.03,">1 nonsynonymous","L60Q P96I",2
"lib1","SARS-CoV-2","GCCGTAAAAAAAAGAC",4,17.43,8.52,-2.25,0.24,1.72,1.2,0.02,">1 nonsynonymous","T15V Y91G A192R",3
"lib1","SARS-CoV-2","GCCGTAAAACCAATAA",2,18.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I Y178L",2
"lib1","SARS-CoV-2","GCCGTAAACCCCAAAT",9,126.78,10.72,-0.04,0.04,2.95,1.01,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","GCCGTAACGAATCTCT",4,145.3,8.78,-1.99,0.09,2.9,1.05,0,"1 nonsynonymous","G166Y",1
"lib1","SARS-CoV-2","GCCGTAACTACTGGTT",2,19.63,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","I28K D59V Y66A F167L A192T",5
"lib1","SARS-CoV-2","GCCGTAACTAGATATC",11,144.82,10.61,-0.15,0.06,2.91,1,0,">1 nonsynonymous","T3F C61S P197D",3
"lib1","SARS-CoV-2","GCCGTAAGGACGAATC",4,26.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R27S A89S L162C",3
"lib1","SARS-CoV-2","GCCGTAAGTCACATAC",3,13.09,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V52D I104K",2
"lib1","SARS-CoV-2","GCCGTAATCACGATCT",3,9.86,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P7A I104N D137P Y175C",4
"lib1","SARS-CoV-2","GCCGTACAATCGATCA",1,25.54,10.63,-0.13,0.07,2.99,1,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","GCCGTACACTCCTGTA",3,47.82,10.77,0.01,0.08,2.8,1.1,0,">1 nonsynonymous","S29R S129G P149D",3
"lib1","SARS-CoV-2","GCCGTACTAAATTAAG",1,12.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9T S36R K56G K114Y N120A L131Y Q176K",7
"lib1","SARS-CoV-2","GCCGTATGATAGCAAA",5,29.87,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","F8D V52A",2
"lib1","SARS-CoV-2","GCCGTATGGCTGCAAA",8,87.76,10.22,-0.55,0.08,2.69,1.03,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","GCCGTCACAAATGACC",2,2.51,NA,NA,NA,NA,NA,NA,"stop","S45K V52D G116*",3
"lib1","SARS-CoV-2","GCCGTCATTTACCGGA",7,12.78,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","R73I L95C E141R",3
"lib1","SARS-CoV-2","GCCGTCCACTCAGTGG",1,33.36,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","E10A F17I Y39S T63L N92V G155N",6
"lib1","SARS-CoV-2","GCCGTCCCCAAATCAT",4,10.64,6.04,-4.73,1.29,1.5,1.21,0.04,">1 nonsynonymous","L5M C31M P96S I104L Y121C",5
"lib1","SARS-CoV-2","GCCGTCTAAATTATTA",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N F70V V173D",3
"lib1","SARS-CoV-2","GCCGTCTGAGACAATC",3,5.97,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R16Y N40R L60S V103R G116F T148L S184P",7
"lib1","SARS-CoV-2","GCCGTCTTTAATCACT",2,10.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73F K94P C102R N118S P177G",5
"lib1","SARS-CoV-2","GCCGTGAAATACTTAC",1,10.1,6,-4.76,2,1.5,1.15,0.08,">1 nonsynonymous","Y35V Q84V I104V N120W Y143D N151M F167V",7
"lib1","SARS-CoV-2","GCCGTGAACATATCAC",5,66.39,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36Q Y91K R127W V153L",4
"lib1","SARS-CoV-2","GCCGTGCCTTACCGCG",20,34.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R G155L G174P E186L",4
"lib1","SARS-CoV-2","GCCGTGGTATATTTGT",2,15.97,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F99P V103R F134R",3
"lib1","SARS-CoV-2","GCCGTTAAATATTGTC",4,12.43,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K48S G86K P149L",3
"lib1","SARS-CoV-2","GCCGTTAATGGAAATG",6,160.46,8.61,-2.15,0.12,2.29,1.08,0.01,">1 nonsynonymous","R25S Y119S",2
"lib1","SARS-CoV-2","GCCGTTACAACAAAAT",9,274.24,8.45,-2.32,0.1,2.5,1.09,0,">1 nonsynonymous","V115T Y143C",2
"lib1","SARS-CoV-2","GCCGTTACCAAGTAAA",5,97.08,10.15,-0.61,0.06,2.71,1,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","GCCGTTACCACCATAA",3,7.66,9.59,-1.18,0.11,2.67,1.12,0.01,">1 nonsynonymous","Y35S I142P",2
"lib1","SARS-CoV-2","GCCGTTACCTGTCACT",5,41.48,9.75,-1.01,0.12,1.99,1.07,0.01,">1 nonsynonymous","G9K N30M E186I",3
"lib1","SARS-CoV-2","GCCGTTATCACTTATA",3,25.72,10.61,-0.15,0.08,2.84,1.12,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","GCCGTTCTAACCCGTC",2,28.12,9.88,-0.88,0.14,2.2,1.07,0.01,">1 nonsynonymous","N40D W106K S129R",3
"lib1","SARS-CoV-2","GCCGTTCTCTAAGCAG",4,222.74,9.79,-0.98,0.09,2.08,1.07,0,">1 nonsynonymous","S139N T140I Y178S",3
"lib1","SARS-CoV-2","GCCGTTGGGTTTCTAA",4,42.72,7.2,-3.56,0.15,1.92,1.15,0,">1 nonsynonymous","I104V C158S",2
"lib1","SARS-CoV-2","GCCGTTTCAATCAGAC",4,31.53,6.66,-4.1,0.54,1.5,1.16,0.04,">1 nonsynonymous","Y39R F99V S108P",3
"lib1","SARS-CoV-2","GCCGTTTCGATGACAA",4,1.42,NA,NA,NA,NA,NA,NA,"stop","T46K L122C R179*",3
"lib1","SARS-CoV-2","GCCGTTTTACTTCGTA",4,86.91,8.4,-2.36,0.15,2.1,1.15,0.01,">1 nonsynonymous","A89V Y119L K198R",3
"lib1","SARS-CoV-2","GCCTAAAAAAAAACTG",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y A18E D90V N110G G117T",5
"lib1","SARS-CoV-2","GCCTAAAAATATCGAG",6,188.69,10.18,-0.58,0.04,2.87,1.02,0,"1 nonsynonymous","C6G",1
"lib1","SARS-CoV-2","GCCTAAAAGATTATGA",4,49.47,10.01,-0.76,0.1,2.04,1.09,0,"1 nonsynonymous","V77A",1
"lib1","SARS-CoV-2","GCCTAAAATACAAGCA",1,14.79,10.25,-0.51,0.06,3,1.01,0,">1 nonsynonymous","Y35T P54T S129R",3
"lib1","SARS-CoV-2","GCCTAAACACTCGATT",7,92.88,10.62,-0.14,0.05,2.89,1.04,0,">1 nonsynonymous","D98N Q144P",2
"lib1","SARS-CoV-2","GCCTAAACTGACTCGT",1,45.51,9.8,-0.97,0.12,2.62,1.05,0,">1 nonsynonymous","L5T A14V A22E T63L",4
"lib1","SARS-CoV-2","GCCTAAACTGGCACCA",2,26.48,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9V E10T D137V N157R",4
"lib1","SARS-CoV-2","GCCTAAAGCACAGGTG",4,42.83,6.01,-4.76,0.78,1.5,1.25,0.01,">1 nonsynonymous","N4D I28L D90K S113L C158S T201M",6
"lib1","SARS-CoV-2","GCCTAAAGCTTCATAT",1,14.44,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D98M R124H T201Y",3
"lib1","SARS-CoV-2","GCCTAAAGGCCACACT",3,39.96,8.36,-2.4,0.1,1.72,1.07,0,">1 nonsynonymous","V20I K48N Y165H",3
"lib1","SARS-CoV-2","GCCTAAATAAATTGAA",4,28.32,10.52,-0.25,0.06,2.97,1.02,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","GCCTAAATAGATCATA",6,75.17,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","D90I D98N N107M K132W",4
"lib1","SARS-CoV-2","GCCTAAATCAAGAATC",1,20.26,9.87,-0.89,0.15,2.49,1.08,0.01,"1 nonsynonymous","F47S",1
"lib1","SARS-CoV-2","GCCTAAATCCGTATAA",2,104.37,8.56,-2.21,0.08,2.74,1.04,0,">1 nonsynonymous","S36T T85M G166Y",3
"lib1","SARS-CoV-2","GCCTAAATCCTGCCAT",7,76.85,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","L5W A14G S36L Y91W C158V",5
"lib1","SARS-CoV-2","GCCTAACACCTTGTAA",5,175.92,10.05,-0.72,0.04,2.89,1.02,0,">1 nonsynonymous","S43T F44T K128H G174Q",4
"lib1","SARS-CoV-2","GCCTAACACTTATATA",6,255.21,9.82,-0.94,0.03,2.89,1.03,0,">1 nonsynonymous","N1A L125C P149G",3
"lib1","SARS-CoV-2","GCCTAACCCAGATTAG",3,8.4,9.57,-1.19,0.37,1.5,1.13,0.04,">1 nonsynonymous","V77K G116T",2
"lib1","SARS-CoV-2","GCCTAACCCCATTTTT",2,38.49,10.59,-0.17,0.05,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTAACGGATGGGTC",4,72.56,10.67,-0.09,0.05,2.93,1.02,0,">1 nonsynonymous","K26Q E141A",2
"lib1","SARS-CoV-2","GCCTAACTTCGCGGTC",6,75.1,10.7,-0.07,0.06,2.91,1.05,0,"1 nonsynonymous","G152E",1
"lib1","SARS-CoV-2","GCCTAAGAAGTATGAA",2,13.74,10.8,0.04,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTAAGAATTTGTTA",3,14.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35W L95Y I104Y F156P",4
"lib1","SARS-CoV-2","GCCTAAGACGGACAAG",1,11.59,9.36,-1.4,0.19,2.6,1.11,0.01,">1 nonsynonymous","E10W D97A",2
"lib1","SARS-CoV-2","GCCTAATAAGCCAAAC",10,190.47,9.89,-0.87,0.07,2.11,1.06,0,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","GCCTAATACAGAGGCT",1,1.95,NA,NA,NA,NA,NA,NA,"stop","A14D A81* E154G L188T",4
"lib1","SARS-CoV-2","GCCTAATGAACCCATA",3,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G V11A S41N V103L G152S",5
"lib1","SARS-CoV-2","GCCTAATTAAATATTC",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141L P169S",2
"lib1","SARS-CoV-2","GCCTAATTCGCAGTGA",10,129.13,10.62,-0.14,0.04,2.92,1.04,0,"1 nonsynonymous","R78C",1
"lib1","SARS-CoV-2","GCCTAATTTCTTAGAG",1,1.43,NA,NA,NA,NA,NA,NA,"stop","K56* R78S T100E G152S",4
"lib1","SARS-CoV-2","GCCTACAAATAACTAT",4,87.22,10.82,0.05,0.07,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTACAAATTAAGCC",4,12.3,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","F17I V103S G116S",3
"lib1","SARS-CoV-2","GCCTACAAATTGATTC",2,32.46,8.98,-1.78,0.2,1.5,1.04,0.02,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","GCCTACAATGGAGTAA",4,3.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","GCCTACAATTAGACAC",1,70.08,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7L A22S Y35L G146V C158G",5
"lib1","SARS-CoV-2","GCCTACACATAGCCGC",11,243.98,10.72,-0.04,0.04,2.96,1.01,0,"1 nonsynonymous","Y39N",1
"lib1","SARS-CoV-2","GCCTACAGATATAGCA",2,401.41,10,-0.77,0.14,1.5,1,0.01,">1 nonsynonymous","A18K Y119L E141V G146L",4
"lib1","SARS-CoV-2","GCCTACAGGGCATGTT",6,32.51,10.75,-0.02,0.04,2.9,1.01,0,">1 nonsynonymous","S53V G83N",2
"lib1","SARS-CoV-2","GCCTACAGTCTGTAGG",1,1.34,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib1","SARS-CoV-2","GCCTACATATCCCAAA",3,51.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124T S129I",2
"lib1","SARS-CoV-2","GCCTACATCCCGAAGC",1,11.42,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","F44W G86N P133S L162H Q168M",5
"lib1","SARS-CoV-2","GCCTACCAAACCAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A K87M",2
"lib1","SARS-CoV-2","GCCTACCAAGAAAGAC",6,105.55,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G83P Q144R F167K K198G",4
"lib1","SARS-CoV-2","GCCTACCAAGCCATAA",3,13.82,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","S36Y T85V I142N F156T Y175C",5
"lib1","SARS-CoV-2","GCCTACCCACGATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G74L A89* W106* Y119C",4
"lib1","SARS-CoV-2","GCCTACGGATACCTAA",1,13.18,10.63,-0.13,0.14,2.87,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCCTACGGGTATGCAT",13,71.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55M N92K G146P",3
"lib1","SARS-CoV-2","GCCTACGTACCTACAC",6,22.52,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N58K Y91A D97S N107L F134I N157Q S200E",7
"lib1","SARS-CoV-2","GCCTACGTACGCACGT",4,102.11,8.69,-2.08,0.09,2.94,1.05,0,">1 nonsynonymous","I138L V153T T170V",3
"lib1","SARS-CoV-2","GCCTACGTATGATATA",3,6.61,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","N13S A42T P161L C195P",4
"lib1","SARS-CoV-2","GCCTACTAATCATGAG",2,0.36,NA,NA,NA,NA,NA,NA,"stop","V11K V37* S113T",3
"lib1","SARS-CoV-2","GCCTACTAGGACGCGT",9,37.32,7.43,-3.34,0.31,1.5,1.12,0.03,">1 nonsynonymous","K87L W106L S139Y T201R",4
"lib1","SARS-CoV-2","GCCTACTCATACACCA",4,35.5,8.96,-1.8,0.1,2.73,1.12,0.01,">1 nonsynonymous","V32L D90R Y119D",3
"lib1","SARS-CoV-2","GCCTACTCCCACCCCT",7,53.36,6.99,-3.78,0.38,1.5,1.21,0.03,">1 nonsynonymous","N118A P133G T170L",3
"lib1","SARS-CoV-2","GCCTACTGCACCACAT",2,34.34,10.68,-0.09,0.09,2.82,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTACTTAACTAGGT",2,37.95,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","T46V Y91F L162P",3
"lib1","SARS-CoV-2","GCCTAGAAACACCATG",8,5,NA,NA,NA,NA,NA,NA,"stop","W23K C61S Y175*",3
"lib1","SARS-CoV-2","GCCTAGAAATAACCAA",3,61.74,10.26,-0.51,0.05,2.95,1.01,0,"1 nonsynonymous","Y91W",1
"lib1","SARS-CoV-2","GCCTAGAAATTAGAAG",3,6.6,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T100A W106C T170V",3
"lib1","SARS-CoV-2","GCCTAGACCAGAATAC",7,43.72,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I28L A81L D98L G116K G146R",5
"lib1","SARS-CoV-2","GCCTAGACCATCTTAA",3,85.97,10.74,-0.02,0.05,2.9,1.06,0,"1 nonsynonymous","T148A",1
"lib1","SARS-CoV-2","GCCTAGACTAAAACGT",2,10.94,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29R N120L G155H P169I",4
"lib1","SARS-CoV-2","GCCTAGACTGTTCCGC",3,48.92,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y119W R124M",2
"lib1","SARS-CoV-2","GCCTAGAGTACGGAAG",4,64.49,10.6,-0.17,0.03,2.95,1.01,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","GCCTAGATAAACCCAA",3,70.06,10.78,0.01,0.07,2.96,1.01,0,"1 nonsynonymous","T85R",1
"lib1","SARS-CoV-2","GCCTAGCATCCCAGGT",2,69.87,10.51,-0.25,0.06,2.87,1.1,0,"1 nonsynonymous","S29M",1
"lib1","SARS-CoV-2","GCCTAGCCCTGGAAAG",1,49.91,10.58,-0.19,0.05,2.97,1,0,">1 nonsynonymous","W23F A42Q L188Y",3
"lib1","SARS-CoV-2","GCCTAGCCTTTCCGGA",4,10.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58S V103C Y175N",3
"lib1","SARS-CoV-2","GCCTAGCTAGAATGGG",4,65.01,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","C49E F62S I138L",3
"lib1","SARS-CoV-2","GCCTAGGCTTAATACA",4,69.23,10.74,-0.03,0.09,2.92,1.04,0,">1 nonsynonymous","L5P V32M T140S",3
"lib1","SARS-CoV-2","GCCTAGGGTATCCTCT",2,21.24,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T55A D90N L131N I138H",4
"lib1","SARS-CoV-2","GCCTAGGTAGAAAATA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F8* I88M C102W",3
"lib1","SARS-CoV-2","GCCTAGTATCTGGTTT",3,72.08,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","W106Y Y143K Y165S",3
"lib1","SARS-CoV-2","GCCTAGTTTACCGCCT",3,224.64,10.43,-0.33,0.04,2.92,1.03,0,">1 nonsynonymous","R16I S41P N120V P197R",4
"lib1","SARS-CoV-2","GCCTATAAATAATCTT",5,1.67,NA,NA,NA,NA,NA,NA,"stop","T3* C6W F62M",3
"lib1","SARS-CoV-2","GCCTATACAAAATAAG",1,22.82,9.91,-0.86,0.13,1.91,1.04,0.01,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","GCCTATAGTAGACATA",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S C102R V115Q P133C",4
"lib1","SARS-CoV-2","GCCTATATAATGATAA",10,53.81,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37L F99S L183H",3
"lib1","SARS-CoV-2","GCCTATCACACCAATA",4,138.69,10.49,-0.27,0.03,2.91,1.02,0,">1 nonsynonymous","N64P G146A",2
"lib1","SARS-CoV-2","GCCTATCATATACCAT",3,39.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N171F",1
"lib1","SARS-CoV-2","GCCTATCCCTGGCCGC",7,106.89,10.16,-0.61,0.03,2.85,1.02,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","GCCTATCGGACCAGTG",6,62.56,6.42,-4.35,0.26,1.5,1.14,0,">1 nonsynonymous","N24Y V37M K56D N107I",4
"lib1","SARS-CoV-2","GCCTATCTTATTGCTA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","N1G A14* L60F V71W D90R V115Y F134L V153S",8
"lib1","SARS-CoV-2","GCCTATGAATTTATGA",3,16.26,9.77,-1,0.09,2.17,1.13,0,">1 nonsynonymous","G51T C61R E141V",3
"lib1","SARS-CoV-2","GCCTATGGCATAAAAA",4,95.2,10.41,-0.36,0.05,2.87,1.08,0,">1 nonsynonymous","I138V F156V",2
"lib1","SARS-CoV-2","GCCTATTAAATAAGAC",8,98.12,6.11,-4.65,0.72,1.5,1.21,0.01,">1 nonsynonymous","A18Y S41V N107Q Y119R G146Q G155P",6
"lib1","SARS-CoV-2","GCCTATTGTCCGTGGA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S19K G146*",2
"lib1","SARS-CoV-2","GCCTATTGTCGTTCGG",6,37.69,6,-4.76,0.97,1.5,1.13,0,">1 nonsynonymous","C49L L60V K94V L162V",4
"lib1","SARS-CoV-2","GCCTATTTAGACTATA",2,53.82,10.78,0.01,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTATTTATGTAAGT",4,110.08,9.53,-1.23,0.12,2.56,1.15,0.01,">1 nonsynonymous","C6I F156V",2
"lib1","SARS-CoV-2","GCCTATTTGCAGATAG",2,21.59,10.4,-0.37,0.07,2.7,1.14,0,">1 nonsynonymous","S43M I138F V153I Q163S",4
"lib1","SARS-CoV-2","GCCTCAAAAACCTAGA",5,54.1,9.28,-1.49,0.14,1.82,1.17,0.01,">1 nonsynonymous","A22S N64L N92S",3
"lib1","SARS-CoV-2","GCCTCAAACACTTCCT",11,148.27,10.72,-0.04,0.07,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTCAAATAAACCTA",9,50.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I80Y L187P",2
"lib1","SARS-CoV-2","GCCTCAACAAGTACCT",6,99.25,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5R A14Q F62Y I138C G172L",5
"lib1","SARS-CoV-2","GCCTCAACGCTTACTA",2,17.37,10.73,-0.04,0.08,2.87,1.01,0,">1 nonsynonymous","K26M T63G",2
"lib1","SARS-CoV-2","GCCTCAATTTTTCATG",5,52.67,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7S S53L Y93H",3
"lib1","SARS-CoV-2","GCCTCACAAAGTCGGG",11,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I P149L",2
"lib1","SARS-CoV-2","GCCTCACCACATATCA",4,80.96,9.22,-1.55,0.08,2.92,1.03,0,">1 nonsynonymous","N64M Q168L",2
"lib1","SARS-CoV-2","GCCTCACTAAACGCGA",6,110.34,8.7,-2.06,0.13,1.67,1.15,0.01,">1 nonsynonymous","I88A K128A",2
"lib1","SARS-CoV-2","GCCTCAGACCGTACCC",8,26.05,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F12Y N92K I104S",3
"lib1","SARS-CoV-2","GCCTCAGATATCGCGG",2,55.49,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N4F Y93W L122F",3
"lib1","SARS-CoV-2","GCCTCAGGAACGCAAA",10,50.95,10.74,-0.02,0.08,2.91,1.06,0,"1 nonsynonymous","G196V",1
"lib1","SARS-CoV-2","GCCTCAGTGAGTTAAT",7,83.89,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","D59I A105R",2
"lib1","SARS-CoV-2","GCCTCATACAAGTACA",3,27.51,10.61,-0.15,0.07,2.96,1.04,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","GCCTCATACCAAAAAA",7,93.38,9.75,-1.02,0.19,1.74,1.1,0.01,">1 nonsynonymous","N64L E135L",2
"lib1","SARS-CoV-2","GCCTCATCCATGGTCA",2,7.85,9.83,-0.93,0.09,2.89,1.01,0,">1 nonsynonymous","F44I Y119L G166N",3
"lib1","SARS-CoV-2","GCCTCATTAGCAATAA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I2S S19R R78M F99*",4
"lib1","SARS-CoV-2","GCCTCCAACGTACAGG",7,82.63,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V37S F70D",2
"lib1","SARS-CoV-2","GCCTCCAACTAACCAG",1,40.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K26W A105R Q144L",3
"lib1","SARS-CoV-2","GCCTCCAAGAATTGTG",5,20.98,7.9,-2.87,0.16,1.53,1.08,0.01,">1 nonsynonymous","N118P Q144I",2
"lib1","SARS-CoV-2","GCCTCCAATATTTAAC",2,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F F44L R127H N130D T140M C150Y",6
"lib1","SARS-CoV-2","GCCTCCACATTGCTTG",2,21.98,8.49,-2.28,0.19,2.23,1.14,0.01,">1 nonsynonymous","N64P Q176S",2
"lib1","SARS-CoV-2","GCCTCCCAATAGAGTA",5,98.53,9.54,-1.22,0.2,1.63,1.08,0.02,">1 nonsynonymous","R16Q Q84L D98F S129C",4
"lib1","SARS-CoV-2","GCCTCCCACCATACAA",1,0.47,NA,NA,NA,NA,NA,NA,"stop","F17G V77E Y91T V153*",4
"lib1","SARS-CoV-2","GCCTCCCATTCAATAA",5,23.23,8.34,-2.43,0.36,1.5,1,0.06,">1 nonsynonymous","S45G W106E G117V T140N Q176T K198I",6
"lib1","SARS-CoV-2","GCCTCCCCTTTCAATG",3,81.29,10.83,0.07,0.07,2.94,1.01,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","GCCTCCGACTAAAAAC",2,5.22,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C61S F99I N151Q P161Y R179M",5
"lib1","SARS-CoV-2","GCCTCCGTGCCCTTAC",5,46.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D112T R127S S139T",3
"lib1","SARS-CoV-2","GCCTCCGTTAAATTCT",1,64.33,10.31,-0.45,0.07,2.73,1,0,">1 nonsynonymous","T63Y T100S",2
"lib1","SARS-CoV-2","GCCTCCTATAAAAGAA",8,67.69,9.48,-1.29,0.16,1.5,1.09,0.01,">1 nonsynonymous","Y50L K56R",2
"lib1","SARS-CoV-2","GCCTCGACCCTTTCTT",5,12.58,9.4,-1.37,0.23,1.64,1.09,0.03,">1 nonsynonymous","S19N D34Y A145M",3
"lib1","SARS-CoV-2","GCCTCGACGACTAGGA",5,25.17,9.34,-1.43,0.17,1.65,1.13,0.01,">1 nonsynonymous","W106L E141L",2
"lib1","SARS-CoV-2","GCCTCGCTAAGAACAT",3,36.31,10.96,0.2,0.17,2.78,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCCTCGGCTCTAACTA",1,15.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20L R27K C61L P149I C195S",5
"lib1","SARS-CoV-2","GCCTCGGTAATAAGCC",2,15.08,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S69L R127C N151R G174W",4
"lib1","SARS-CoV-2","GCCTCTAAAGAGCCAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F156W",1
"lib1","SARS-CoV-2","GCCTCTAATGGGTTGC",7,79.08,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63R K87S C150S F167R",4
"lib1","SARS-CoV-2","GCCTCTCACCGCGAAT",12,110.94,8.83,-1.93,0.15,1.66,1.15,0.01,">1 nonsynonymous","V20S I142F K199H",3
"lib1","SARS-CoV-2","GCCTCTCCACTTGGTT",5,8.68,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","Y91S Y143K P149Y",3
"lib1","SARS-CoV-2","GCCTCTCCGAATCAAG",2,32.51,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","F17R N30K Y50Q Y119Q F156M",5
"lib1","SARS-CoV-2","GCCTCTCTAATGGACG",1,39.84,10.63,-0.13,0.07,2.91,1.04,0,">1 nonsynonymous","A89S T201I",2
"lib1","SARS-CoV-2","GCCTCTGAAATATAGT",4,198.83,8.18,-2.59,0.22,1.73,1.13,0.02,">1 nonsynonymous","A42S S139H N157L",3
"lib1","SARS-CoV-2","GCCTCTGGACAACGAT",3,51.21,10.83,0.07,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTCTTACATTATCT",7,411.56,10.71,-0.06,0.04,2.92,1.03,0,"1 nonsynonymous","V153Y",1
"lib1","SARS-CoV-2","GCCTCTTATCAAGTAA",3,1.75,NA,NA,NA,NA,NA,NA,"stop","F8* S69* R78V",3
"lib1","SARS-CoV-2","GCCTCTTGATAACTAA",1,25.03,9.2,-1.56,0.11,2.08,1.05,0.01,">1 nonsynonymous","E10Y G116Q P169V",3
"lib1","SARS-CoV-2","GCCTCTTTCATCACAC",8,40.09,6.24,-4.53,0.48,1.5,1.15,0.01,">1 nonsynonymous","Y93N N120Y V180I",3
"lib1","SARS-CoV-2","GCCTCTTTCATTTCCG",4,113.15,9.78,-0.98,0.14,1.87,1.11,0.01,">1 nonsynonymous","V37S S45L T100S N151E",4
"lib1","SARS-CoV-2","GCCTGAAAATCTGACA",4,6.53,10.66,-0.1,0.64,2.06,1,0.08,">1 nonsynonymous","E10G K87G P149R G174Q",4
"lib1","SARS-CoV-2","GCCTGAACAATGTGAA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122R G155S",2
"lib1","SARS-CoV-2","GCCTGAACCCAATGGG",3,8.67,7.17,-3.59,0.43,2.26,1.14,0.04,">1 nonsynonymous","C6R Y123N",2
"lib1","SARS-CoV-2","GCCTGAACGTAAGTAG",14,167.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9N N24K V37W G155F N171K",5
"lib1","SARS-CoV-2","GCCTGAAGTCACATAG",1,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","GCCTGAATTACGTCTG",5,72.84,10.7,-0.06,0.07,2.89,1.06,0,"1 nonsynonymous","S53H",1
"lib1","SARS-CoV-2","GCCTGACCAGACGGGC",2,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C L57G",2
"lib1","SARS-CoV-2","GCCTGACCCCCACTGA",2,32.65,7.45,-3.32,0.15,1.88,1.14,0.01,">1 nonsynonymous","G9N A33T C158R",3
"lib1","SARS-CoV-2","GCCTGACTAGGTACCG",3,11.19,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K94L P133G",2
"lib1","SARS-CoV-2","GCCTGAGAAATGTCGG",2,88.11,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T55I Y123W P161K",3
"lib1","SARS-CoV-2","GCCTGAGACGTAGACT",1,15.06,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P96L D137A Y159C F167V",4
"lib1","SARS-CoV-2","GCCTGAGCCTCTTCCA",9,47.66,8.64,-2.12,0.16,1.66,1.21,0.01,">1 nonsynonymous","D34G D97L Y121M",3
"lib1","SARS-CoV-2","GCCTGAGTATATTTGT",1,40.84,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y119S C150H",2
"lib1","SARS-CoV-2","GCCTGATAATAAGTAA",1,31.99,6.61,-4.16,0.41,1.5,1.07,0.02,">1 nonsynonymous","C6F S113M",2
"lib1","SARS-CoV-2","GCCTGATATTTAGACA",6,13.75,6,-4.76,2,3,1.05,0,"1 nonsynonymous","G101P",1
"lib1","SARS-CoV-2","GCCTGCAACTAAAATC",2,10.15,NA,NA,NA,NA,NA,NA,"stop","A89W K114F Y175* S184H",4
"lib1","SARS-CoV-2","GCCTGCAATTTCTGCC",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I C49V F160D",3
"lib1","SARS-CoV-2","GCCTGCAGCAACGTAG",5,33.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N24F A89L N151T G155V G166F",5
"lib1","SARS-CoV-2","GCCTGCCAGAGGGCTA",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F134R",2
"lib1","SARS-CoV-2","GCCTGCCCCCAAAAAA",2,1.45,NA,NA,NA,NA,NA,NA,"stop","G51M C61K F99D W106S G166*",5
"lib1","SARS-CoV-2","GCCTGCCCTACTTGAA",7,19.13,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N13M G86S K94H G116K Y178V",5
"lib1","SARS-CoV-2","GCCTGCCGAAAATAAA",3,42.07,6,-4.76,1.34,1.5,1.19,0.01,">1 nonsynonymous","R127D Q144R",2
"lib1","SARS-CoV-2","GCCTGCCTAAGGATCC",3,34.94,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F62K C150Y",2
"lib1","SARS-CoV-2","GCCTGCGCACATAGAG",29,121.77,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A42L L60P Q84F K94G L131V Y165S K198M",7
"lib1","SARS-CoV-2","GCCTGCTAGTCGTTAT",12,2909.25,10.8,0.03,0.05,2.93,1.04,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","GCCTGGAAGTACTAAA",20,162.25,7.4,-3.37,0.24,1.5,1.08,0.02,">1 nonsynonymous","L5R N107Y",2
"lib1","SARS-CoV-2","GCCTGGAATCAATGTC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","C49Y K56R T85A D97*",4
"lib1","SARS-CoV-2","GCCTGGATTACACATT",14,134.8,9.12,-1.64,0.08,2.2,1.12,0,">1 nonsynonymous","F99W S164W P169I",3
"lib1","SARS-CoV-2","GCCTGGCAACCGCACA",1,26.1,7.11,-3.66,0.19,2.08,1.1,0.01,">1 nonsynonymous","L122T C150R",2
"lib1","SARS-CoV-2","GCCTGGCAACTTTCAG",4,19.56,10.77,0,0.12,2.99,1.04,0.01,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","GCCTGGCGGAACTACC",11,101.56,6,-4.76,2,2.93,1.16,0,">1 nonsynonymous","Y91D D98I",2
"lib1","SARS-CoV-2","GCCTGGCTGAGATCTA",4,29.99,6.36,-4.41,0.67,1.5,1.14,0.03,">1 nonsynonymous","D98P A105V N151P",3
"lib1","SARS-CoV-2","GCCTGGGCTTAGTTAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87D F160L",2
"lib1","SARS-CoV-2","GCCTGGTAAAGTTGAT",3,0.72,NA,NA,NA,NA,NA,NA,"stop","C61* G86* Y121L",3
"lib1","SARS-CoV-2","GCCTGTACTTTAAACT",10,55.24,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82L N92K G116R R136C",4
"lib1","SARS-CoV-2","GCCTGTCAAATACGCG",4,14.04,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93D F99R E141W",3
"lib1","SARS-CoV-2","GCCTGTCAACCTATGG",2,12.66,9.43,-1.34,0.1,1.97,1.08,0.01,">1 nonsynonymous","S53F C61T T85I D98R",4
"lib1","SARS-CoV-2","GCCTGTCACACACAGT",3,90.58,6.5,-4.26,0.47,1.5,1.13,0.02,">1 nonsynonymous","C6D S69M N157S",3
"lib1","SARS-CoV-2","GCCTGTCAGCAGCCTG",9,19.93,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T85A F99A D112V",3
"lib1","SARS-CoV-2","GCCTGTCCCAACGCGT",3,41.58,9.36,-1.4,0.3,1.5,1,0.05,">1 nonsynonymous","V11F V37E W106G",3
"lib1","SARS-CoV-2","GCCTGTGATAACAAAT",5,35.09,6.46,-4.31,0.44,1.5,1.1,0.02,">1 nonsynonymous","P54R W106E L131M",3
"lib1","SARS-CoV-2","GCCTGTGGACGTACCC",1,29.09,7.38,-3.38,0.48,1.5,1.12,0.08,">1 nonsynonymous","W23G K56S E154L",3
"lib1","SARS-CoV-2","GCCTGTGGTGCCAAAA",5,40.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W106F S139F N157S N171S",4
"lib1","SARS-CoV-2","GCCTGTGTTCTAATTA",1,11.01,9.97,-0.79,0.15,1.89,1.05,0.01,"1 nonsynonymous","W23S",1
"lib1","SARS-CoV-2","GCCTGTTCACCACGCT",6,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T G101L N157G",3
"lib1","SARS-CoV-2","GCCTGTTGCTACTTGT",1,0.95,NA,NA,NA,NA,NA,NA,"stop","G86Y N110*",2
"lib1","SARS-CoV-2","GCCTGTTTAATCATTT",4,44.34,10.52,-0.24,0.05,2.88,1.08,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","GCCTGTTTTCGCTCCC",2,28.59,9.65,-1.12,0.09,2.81,1.06,0,">1 nonsynonymous","K56M G174C",2
"lib1","SARS-CoV-2","GCCTTAAAAAATGAAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","V37C Y66V C150* Q168M",4
"lib1","SARS-CoV-2","GCCTTAAACATTCGAA",1,118.83,10.36,-0.41,0.04,2.91,1.03,0,">1 nonsynonymous","V37G G174R L188R",3
"lib1","SARS-CoV-2","GCCTTAAATTTTTCCC",1,11.06,6.89,-3.87,0.48,1.68,1.08,0.04,">1 nonsynonymous","F17I S113K Y121P R127L V173L",5
"lib1","SARS-CoV-2","GCCTTAACTCTAACCC",4,33.59,9.74,-1.02,0.09,2.82,1.05,0,">1 nonsynonymous","N118C K132R H189T",3
"lib1","SARS-CoV-2","GCCTTAACTCTTAGGC",3,35.38,9.9,-0.86,0.06,2.9,1.07,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","GCCTTAAGTCATCGTA",5,47.33,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F8G T55R E141T Y178L",4
"lib1","SARS-CoV-2","GCCTTAATGATCAATT",2,50.23,10.67,-0.09,0.06,2.86,1.1,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","GCCTTAATTGATCGTA",2,6.8,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","A145K",1
"lib1","SARS-CoV-2","GCCTTAATTTGTTCAT",6,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L162P T201M",2
"lib1","SARS-CoV-2","GCCTTACAAAAATTAT",3,32.55,10.75,-0.01,0.09,2.83,1.02,0,"1 nonsynonymous","A81R",1
"lib1","SARS-CoV-2","GCCTTACACTCCCCTT",1,10.56,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","F99N R124E Y175E",3
"lib1","SARS-CoV-2","GCCTTACCTTCAGGTT",7,101.98,10.67,-0.1,0.05,2.96,1.01,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","GCCTTACTATAATAAA",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C Y93S S108L",3
"lib1","SARS-CoV-2","GCCTTAGGAGACTGGG",4,24.26,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L60R G86R",2
"lib1","SARS-CoV-2","GCCTTAGGCGAAACGT",13,87.2,6,-4.76,2,3,1.23,0,">1 nonsynonymous","R25Q K94V T100G",3
"lib1","SARS-CoV-2","GCCTTATAAACAAACG",3,57.19,10.74,-0.02,0.08,2.83,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTTATAATACCTCG",4,104.07,10.82,0.05,0.08,2.92,1.04,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","GCCTTATACAATGCAT",1,17.39,10.25,-0.51,0.12,2.54,1.14,0.01,">1 nonsynonymous","L5R G152L N171I",3
"lib1","SARS-CoV-2","GCCTTATATTATTGCA",1,1.28,NA,NA,NA,NA,NA,NA,"stop","F17* F47A E135P",3
"lib1","SARS-CoV-2","GCCTTATCAATCCTAA",12,2.32,NA,NA,NA,NA,NA,NA,"stop","N13* T100R C150Y",3
"lib1","SARS-CoV-2","GCCTTATCATCGTAAG",4,24.54,6.58,-4.18,0.45,1.5,1.07,0.03,">1 nonsynonymous","C61S Y91S A105E",3
"lib1","SARS-CoV-2","GCCTTATGACGATATA",2,65.28,10.5,-0.27,0.07,2.92,1,0,">1 nonsynonymous","F17Y A42G",2
"lib1","SARS-CoV-2","GCCTTCAACACAGTGG",4,14.96,6.26,-4.5,0.7,1.75,1.12,0.03,">1 nonsynonymous","C6V T15F S43V A89S V115T T140P",6
"lib1","SARS-CoV-2","GCCTTCAACCTGGAAC",2,18.31,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14Y N58F P96F G146V",4
"lib1","SARS-CoV-2","GCCTTCAACTATGTTT",4,62.37,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F44Y C49T L60T W106V G155V",5
"lib1","SARS-CoV-2","GCCTTCAAGCACTCCT",4,53.49,10.47,-0.3,0.06,2.93,1.01,0,">1 nonsynonymous","K56N Q84E K132V",3
"lib1","SARS-CoV-2","GCCTTCAATGGCGCTT",2,53.41,10.55,-0.22,0.09,2.85,1.09,0,">1 nonsynonymous","V52L E141T S147L",3
"lib1","SARS-CoV-2","GCCTTCACACACTGTA",6,60.25,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F47I T85A N92D K114N",4
"lib1","SARS-CoV-2","GCCTTCACTGAAGAAC",2,16.79,11.11,0.34,0.12,2.94,1.01,0.01,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","GCCTTCATAGAAAAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128S G155C N157V T201I",4
"lib1","SARS-CoV-2","GCCTTCCAACGTGGGT",4,957.22,10.78,0.02,0.05,2.94,1.04,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","GCCTTCCAATGAATGA",1,76.45,8.77,-1.99,0.11,2.55,1.12,0,">1 nonsynonymous","F12M N118R",2
"lib1","SARS-CoV-2","GCCTTCCACCGTTACT",9,1.87,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib1","SARS-CoV-2","GCCTTCCACTCATTTC",3,71.36,7.59,-3.17,0.3,1.5,1.09,0.03,">1 nonsynonymous","F12V F44D K56Y A81T",4
"lib1","SARS-CoV-2","GCCTTCCGATTCTTAT",10,132.22,9.72,-1.04,0.04,2.83,1.06,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","GCCTTCGAAACTGATC",5,83.39,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","G172T",1
"lib1","SARS-CoV-2","GCCTTCGCAAACACCT",3,8.35,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C49N P54S V173W",3
"lib1","SARS-CoV-2","GCCTTCGCCCTTAAGG",1,10.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14P L38Y V77K D97S",4
"lib1","SARS-CoV-2","GCCTTCGCTACTAGAA",4,9.12,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","R25E D97Y N151P",3
"lib1","SARS-CoV-2","GCCTTCGCTGTCATCA",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D A89L F99S",3
"lib1","SARS-CoV-2","GCCTTCGGTAACATGA",3,15.18,7.94,-2.82,0.43,1.5,1.13,0.08,">1 nonsynonymous","T15I I72Y F134L",3
"lib1","SARS-CoV-2","GCCTTCGTATTGTTAC",4,26.74,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A81F G155H T170I L188H K199H",5
"lib1","SARS-CoV-2","GCCTTCGTTACAAATT",3,49.52,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S41E V103L G117A G146R Y178I",5
"lib1","SARS-CoV-2","GCCTTCTCCCTGTCCA",9,128.22,10.25,-0.52,0.04,2.94,1,0,">1 nonsynonymous","T55L E154H",2
"lib1","SARS-CoV-2","GCCTTCTCGCTTGTGT",2,22.08,9.21,-1.55,0.21,1.58,1.19,0.02,">1 nonsynonymous","V11R D98N P149I",3
"lib1","SARS-CoV-2","GCCTTCTCTAAAAACT",3,173.31,10.86,0.09,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTTCTGCCGACTGG",1,7.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C61M I88S",2
"lib1","SARS-CoV-2","GCCTTGAAATGGCCTG",4,25.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49Q N171I",2
"lib1","SARS-CoV-2","GCCTTGAAGCTAGAAG",1,6.31,10.81,0.04,0.09,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTTGACGCTGAAGT",2,20.36,6,-4.76,2,3,1.19,0,">1 nonsynonymous","V11E L60C N92R W106L",4
"lib1","SARS-CoV-2","GCCTTGAGCCGCAGAC",6,93.27,9.45,-1.32,0.18,1.79,1.18,0.01,">1 nonsynonymous","R16Y S36R C102V",3
"lib1","SARS-CoV-2","GCCTTGATGTACACGC",4,125.47,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7E R25L R124W K132V Y143E",5
"lib1","SARS-CoV-2","GCCTTGATTACCACGT",3,28.92,10.19,-0.57,0.06,2.87,1,0,">1 nonsynonymous","S36V K56G P169F",3
"lib1","SARS-CoV-2","GCCTTGCCAGACCATA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","F44Y T55I D98E E141V G174*",5
"lib1","SARS-CoV-2","GCCTTGCGGGCATAGC",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H C158W",2
"lib1","SARS-CoV-2","GCCTTGGACCGCGACG",1,40.87,6,-4.76,1.43,1.5,1.1,0.02,">1 nonsynonymous","T55V N118T Y143T Y159R",4
"lib1","SARS-CoV-2","GCCTTGGTCTCACTCA",2,16.23,6,-4.76,0.59,3,1.05,0,">1 nonsynonymous","K26G C158T",2
"lib1","SARS-CoV-2","GCCTTGTACGACGAAA",1,28.86,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","D68R",1
"lib1","SARS-CoV-2","GCCTTGTTATTATCAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S D34R L95A K114L",4
"lib1","SARS-CoV-2","GCCTTTACAGCTGGGT",2,12.35,10.79,0.03,0.15,2.81,1,0.01,">1 nonsynonymous","F12I L122E K128N",3
"lib1","SARS-CoV-2","GCCTTTACGCCCAAAA",1,34.68,6.68,-4.09,0.56,1.5,1.21,0.04,">1 nonsynonymous","N24M L95W Q144N G174F",4
"lib1","SARS-CoV-2","GCCTTTACGGACACTG",4,23.73,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","T15D P82I D90A G117Q G166K T201N",6
"lib1","SARS-CoV-2","GCCTTTAGTACTTCTA",1,16.24,10.35,-0.41,0.07,2.97,1.02,0,">1 nonsynonymous","A33Q G155R",2
"lib1","SARS-CoV-2","GCCTTTATAATATCCT",1,20.35,8.96,-1.81,0.11,2.07,1.03,0,">1 nonsynonymous","V11M A18P Y165V",3
"lib1","SARS-CoV-2","GCCTTTATGATCTATT",8,45.13,6.83,-3.93,0.7,1.5,1.15,0.08,"1 nonsynonymous","Y93G",1
"lib1","SARS-CoV-2","GCCTTTGCGACTGTTT",4,67.82,10.15,-0.61,0.08,2.76,1,0,">1 nonsynonymous","F12M F44L G152M",3
"lib1","SARS-CoV-2","GCCTTTGGATTAGACC",5,51.19,10.73,-0.04,0.05,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCCTTTGTCTAAACCA",2,29.3,9.8,-0.96,0.16,1.82,1.11,0.01,">1 nonsynonymous","F8E F44W D59A",3
"lib1","SARS-CoV-2","GCCTTTTAATACTCAG",2,24.37,6.83,-3.93,0.46,1.5,1.09,0.04,">1 nonsynonymous","S45F Y50C A81S D90N",4
"lib1","SARS-CoV-2","GCGAAAAACAACTATA",1,23.27,9.45,-1.32,0.13,2.82,1.11,0,"1 nonsynonymous","G166W",1
"lib1","SARS-CoV-2","GCGAAAAACTAATCAG",4,70.09,10.27,-0.49,0.05,2.85,1,0,">1 nonsynonymous","Y91A Y175W",2
"lib1","SARS-CoV-2","GCGAAAAATCACGGCG",3,5.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2R A33T G83C I88W D137N",5
"lib1","SARS-CoV-2","GCGAAAACATAAAATT",12,159.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L111S R127L",2
"lib1","SARS-CoV-2","GCGAAAACCCAACATA",1,20.73,10.49,-0.27,0.16,2.83,1.06,0.01,">1 nonsynonymous","V52L F160V",2
"lib1","SARS-CoV-2","GCGAAAACCTCGATGG",4,17.92,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N4Y R127K P133A C158P",4
"lib1","SARS-CoV-2","GCGAAAAGAGCCTTTA",2,6.09,7.78,-2.99,0.32,2.82,1.16,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","GCGAAAAGTCAAATGT",1,116.16,8.79,-1.97,0.22,1.77,1.13,0.02,">1 nonsynonymous","V37T P96M G174Q",3
"lib1","SARS-CoV-2","GCGAAAAGTGCAATTC",2,31.87,9.96,-0.8,0.11,2.68,1.08,0.01,">1 nonsynonymous","R16I I28L S43N T85M K94A",5
"lib1","SARS-CoV-2","GCGAAAATTTCTTAAG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T D97E F126T",3
"lib1","SARS-CoV-2","GCGAAACACCTAACCA",5,36.87,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G9F G86R D98L D112A F156V Y165V",6
"lib1","SARS-CoV-2","GCGAAACACTTCCAAC",8,40.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N120V R124V V153W",3
"lib1","SARS-CoV-2","GCGAAACCTCCAATTA",3,31.96,8.69,-2.08,0.12,2.98,1,0.01,"1 nonsynonymous","N157M",1
"lib1","SARS-CoV-2","GCGAAACTACGAACTA",1,8.44,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13P E154R",2
"lib1","SARS-CoV-2","GCGAAAGTCAGTAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56A",1
"lib1","SARS-CoV-2","GCGAAATGCTAGTTTA",6,120.54,9.99,-0.78,0.1,2.27,1.06,0,">1 nonsynonymous","N64G R136A",2
"lib1","SARS-CoV-2","GCGAAATGTTCTGATC",3,28.57,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","V11L N107Y N157I",3
"lib1","SARS-CoV-2","GCGAACAAAACCTGAG",2,8.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G P133M",2
"lib1","SARS-CoV-2","GCGAACAACCAAAATG",11,121.57,9.71,-1.06,0.08,2.09,1.06,0,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","GCGAACAACGCGAACA",4,0.85,NA,NA,NA,NA,NA,NA,"stop","S29* C61W D97T T148P",4
"lib1","SARS-CoV-2","GCGAACAATATCAAGA",17,200.06,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S19V I28M P82W I88V",4
"lib1","SARS-CoV-2","GCGAACAATGATTCAA",6,33.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44G G51V N107Y T201C",4
"lib1","SARS-CoV-2","GCGAACAATGCGCTAC",6,87.34,9.19,-1.57,0.15,1.61,1.11,0.01,">1 nonsynonymous","I2A V37I V77E",3
"lib1","SARS-CoV-2","GCGAACACAAAAAAAT",11,135.43,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17M A22C I28L V65G Y119V P133W",6
"lib1","SARS-CoV-2","GCGAACACCCCTAATT",3,31.74,10.77,0.01,0.06,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAACAGTGATCCAT",4,0.44,NA,NA,NA,NA,NA,NA,"stop","R16I I104Y Y119*",3
"lib1","SARS-CoV-2","GCGAACATAATACGCA",2,260.48,10.73,-0.03,0.04,2.9,1.06,0,">1 nonsynonymous","T3L T201M",2
"lib1","SARS-CoV-2","GCGAACATTACCTCTT",2,0.53,NA,NA,NA,NA,NA,NA,"stop","T3L T140*",2
"lib1","SARS-CoV-2","GCGAACATTCATAATA",3,36.92,10.64,-0.12,0.06,2.84,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAACCGTCAGTCGG",10,177.32,10.76,-0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAACGTACTAATGG",6,29.53,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","G9R K94P Y119S",3
"lib1","SARS-CoV-2","GCGAACGTTACAAGCT",3,40.86,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N92R W106I N130S",3
"lib1","SARS-CoV-2","GCGAACTAATGCATTA",7,6.68,NA,NA,NA,NA,NA,NA,"stop","N64T N151*",2
"lib1","SARS-CoV-2","GCGAACTACGGAATAC",6,2.09,NA,NA,NA,NA,NA,NA,"stop","F8R S36V G83* D90Y",4
"lib1","SARS-CoV-2","GCGAACTTAAGATGTC",4,29.7,9.45,-1.32,0.3,1.5,1.02,0.04,">1 nonsynonymous","Y21L L60K D97I",3
"lib1","SARS-CoV-2","GCGAACTTGGTGTACA",1,74.05,10.74,-0.02,0.09,2.82,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAAGAAACGACCAA",2,14.53,10.13,-0.64,0.25,1.86,1,0.03,">1 nonsynonymous","L60H E135W N151M S200K",4
"lib1","SARS-CoV-2","GCGAAGAAGAATGAAA",8,44.25,10.7,-0.06,0.06,2.82,1.06,0,">1 nonsynonymous","P149Y K198Y",2
"lib1","SARS-CoV-2","GCGAAGACCGCCACAT",4,31.55,10.58,-0.18,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAAGAGATAGATCA",1,12.91,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","F167M",1
"lib1","SARS-CoV-2","GCGAAGCATATTTCAA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A105N D112E F156R R179S",5
"lib1","SARS-CoV-2","GCGAAGCCCAGCCTAG",1,60.89,10.77,0.01,0.08,2.86,1.07,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","GCGAAGCGGTATCGCC",1,15.25,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y50T A89R",2
"lib1","SARS-CoV-2","GCGAAGCTTTCCCCAA",4,18.66,7.65,-3.12,0.22,1.54,1.05,0.02,">1 nonsynonymous","I142H Q176L",2
"lib1","SARS-CoV-2","GCGAAGGATAGAAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V N157T",2
"lib1","SARS-CoV-2","GCGAAGGGTAAGGACC",4,116.54,10.22,-0.54,0.04,2.91,1,0,">1 nonsynonymous","N120F P169S P191S",3
"lib1","SARS-CoV-2","GCGAAGGTCTTACATA",2,24.75,10.59,-0.17,0.12,2.8,1.2,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCGAAGGTGTGTTTTC",3,29.23,6.14,-4.62,1.27,1.5,1.34,0.05,">1 nonsynonymous","D112L T140P Y178H",3
"lib1","SARS-CoV-2","GCGAAGGTTATTTACA",2,10.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51S V103R S129L Y175V P197W",5
"lib1","SARS-CoV-2","GCGAAGTAAATAATAC",15,94.65,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12M F44L T85K E135L N157F",5
"lib1","SARS-CoV-2","GCGAAGTATATACTCC",3,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N E154N P191Q",3
"lib1","SARS-CoV-2","GCGAAGTTATTTCTAC",1,22.07,10.68,-0.08,0.03,2.9,1.05,0,">1 nonsynonymous","S45N T201M",2
"lib1","SARS-CoV-2","GCGAATAAAAATAGTG",4,48.71,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","L5D V37T V77S D97T",4
"lib1","SARS-CoV-2","GCGAATAACTGAAACA",2,56.31,10.09,-0.67,0.07,2.69,1.02,0,">1 nonsynonymous","A33P L57D",2
"lib1","SARS-CoV-2","GCGAATAGAAAAGACG",8,197.7,10.85,0.08,0.07,2.92,1.03,0,"1 nonsynonymous","V37K",1
"lib1","SARS-CoV-2","GCGAATATAAGCGAAA",2,14.54,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V11S W23V R124T P161T",4
"lib1","SARS-CoV-2","GCGAATCCCAGATTAT",7,89.21,10.03,-0.73,0.11,2.04,1.06,0.01,">1 nonsynonymous","E10T P54V T63I D97T",4
"lib1","SARS-CoV-2","GCGAATCCTACTTAAT",8,142.9,10.66,-0.1,0.04,2.93,1.02,0,">1 nonsynonymous","G9L Y39M P197R",3
"lib1","SARS-CoV-2","GCGAATCCTAGTCAGT",1,80.37,9.53,-1.23,0.06,2.77,1.06,0,">1 nonsynonymous","K56L P197S",2
"lib1","SARS-CoV-2","GCGAATCGACTATACG",4,7.69,6.05,-4.72,2,1.5,1.25,0.03,">1 nonsynonymous","D34P G51C Q144G",3
"lib1","SARS-CoV-2","GCGAATCTATAACGTA",7,52.5,6.32,-4.45,0.73,1.5,1.13,0.03,">1 nonsynonymous","L5F N24D I88F G152S",4
"lib1","SARS-CoV-2","GCGAATGAATGGCTTC",4,109.81,10.2,-0.56,0.05,2.81,1.01,0,">1 nonsynonymous","E10T N64L V173A",3
"lib1","SARS-CoV-2","GCGAATTACAGGAGAT",1,19.63,9.47,-1.29,0.3,1.5,1,0.05,">1 nonsynonymous","G9E D90R D112V",3
"lib1","SARS-CoV-2","GCGAATTATAAGGGAC",2,79.24,9.32,-1.44,0.17,1.95,1.11,0.01,">1 nonsynonymous","N107S V115D S184F",3
"lib1","SARS-CoV-2","GCGAATTATAATGCCA",1,21.59,9.46,-1.31,0.18,2.51,1.09,0.01,">1 nonsynonymous","A14V G155R K199N",3
"lib1","SARS-CoV-2","GCGAATTTCACAGGAA",8,220.74,10.46,-0.31,0.03,2.97,1.01,0,">1 nonsynonymous","C61A K128S G174A S184T",4
"lib1","SARS-CoV-2","GCGACAAAAATTAAAA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","L38S S45* R73W",3
"lib1","SARS-CoV-2","GCGACAAAGCAGAGTA",4,40.34,10.69,-0.07,0.04,2.99,1,0,">1 nonsynonymous","Q79K K87I N171T",3
"lib1","SARS-CoV-2","GCGACAAAGGCCGTAT",1,33.27,6.09,-4.67,0.34,2.06,1.08,0,">1 nonsynonymous","D68G G117P",2
"lib1","SARS-CoV-2","GCGACAAATTTCCTAT",4,122.82,10.02,-0.75,0.04,2.75,1.02,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","GCGACAACGTATAAAA",1,31.69,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17N F47V A105G S129E",4
"lib1","SARS-CoV-2","GCGACAAGAAGGATAT",10,126.61,10.07,-0.69,0.06,2.77,1.02,0,">1 nonsynonymous","N13Y K87R S184N",3
"lib1","SARS-CoV-2","GCGACAAGACCATCTT",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67C S147P",2
"lib1","SARS-CoV-2","GCGACAAGATGAAATT",3,50.22,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12Q L60K P133L T201E",4
"lib1","SARS-CoV-2","GCGACAATAACATAGT",7,77.52,10.82,0.06,0.08,2.89,1.05,0,"1 nonsynonymous","L122I",1
"lib1","SARS-CoV-2","GCGACAATTGAATGAC",3,35.11,10.65,-0.12,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGACACACACAACGC",5,14.85,8.99,-1.78,0.36,1.55,1.15,0.05,">1 nonsynonymous","R127Q P149T",2
"lib1","SARS-CoV-2","GCGACACATAAAGTAA",19,133.64,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","K56G Y66I T85Y F99N K114P",5
"lib1","SARS-CoV-2","GCGACACCCGCCACGC",4,97.12,9.73,-1.03,0.07,2.43,1.06,0,">1 nonsynonymous","D34P D59M G174A",3
"lib1","SARS-CoV-2","GCGACACGCCTTACAG",9,31.39,6,-4.76,2,1.5,1.33,0.02,">1 nonsynonymous","T3L F44A V77M A105K",4
"lib1","SARS-CoV-2","GCGACACTGGAATCGA",1,0.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","GCGACACTTGTCCATA",4,33.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4I D90N C102Y P177W",4
"lib1","SARS-CoV-2","GCGACAGAACTTATGG",1,56.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18M K87S A105V Q168M",4
"lib1","SARS-CoV-2","GCGACAGATTCTACTA",3,35.02,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G9L Y91P G172V",3
"lib1","SARS-CoV-2","GCGACAGCATGTGGTC",1,50.71,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N107L F156M Y178G",3
"lib1","SARS-CoV-2","GCGACAGGAATGGCAC",2,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F V103G P169A V182T",4
"lib1","SARS-CoV-2","GCGACAGGTAAAATGT",2,40.37,10.34,-0.43,0.08,2.82,1.01,0,"1 nonsynonymous","P96D",1
"lib1","SARS-CoV-2","GCGACATCAAAGCATT",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107S K199L",2
"lib1","SARS-CoV-2","GCGACATCAATTATGA",3,46.05,10.65,-0.12,0.08,2.95,1.01,0,">1 nonsynonymous","V11I R27M I104M",3
"lib1","SARS-CoV-2","GCGACCAAGCCACTAC",5,23.15,8.54,-2.22,0.27,1.63,1.29,0.03,">1 nonsynonymous","C6Q S41K G146H",3
"lib1","SARS-CoV-2","GCGACCAAGCTCAAAG",2,26.81,6,-4.76,2,3,1.08,0,">1 nonsynonymous","A81H Y143W T148N T170L",4
"lib1","SARS-CoV-2","GCGACCACCATACTGA",1,9.17,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I28D S45K L60N T170A",4
"lib1","SARS-CoV-2","GCGACCAGACACAACT",8,72.59,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19T K56N E76K Y143R G152S",5
"lib1","SARS-CoV-2","GCGACCAGCCCAAACT",7,65.48,9.49,-1.27,0.13,1.68,1.16,0.01,"1 nonsynonymous","F12R",1
"lib1","SARS-CoV-2","GCGACCCAGAAAACTA",1,22.33,9.96,-0.8,0.16,1.94,1.03,0.01,">1 nonsynonymous","Q84R D90Y D97S",3
"lib1","SARS-CoV-2","GCGACCCATACTGTAG",8,93.95,10.74,-0.03,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGACCCCAGCGCTTA",3,19.81,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I28R D90V W106V Y121L",4
"lib1","SARS-CoV-2","GCGACCCCGTACCAAG",1,0.41,NA,NA,NA,NA,NA,NA,"stop","S45K V103* F156R",3
"lib1","SARS-CoV-2","GCGACCCTAAACAATT",1,7.19,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C61I D90C S108C S129C T170Q",5
"lib1","SARS-CoV-2","GCGACCCTATAACAAA",5,1.23,NA,NA,NA,NA,NA,NA,"stop","L38Q L60T Y143*",3
"lib1","SARS-CoV-2","GCGACCGATTCCCACG",6,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A S19R N64E T85M P197L",5
"lib1","SARS-CoV-2","GCGACCTGGAAGGCAA",1,30.93,10.44,-0.32,0.11,2.74,1.21,0.01,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","GCGACCTGTTTACCTA",3,58.33,10.72,-0.05,0.06,2.91,1.08,0,"1 nonsynonymous","T46M",1
"lib1","SARS-CoV-2","GCGACGACAGCTCATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61Q",1
"lib1","SARS-CoV-2","GCGACGAGGAAACCTG",6,64.06,9.14,-1.62,0.22,1.5,1.08,0.02,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","GCGACGAGTATTAGGA",1,11.32,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G101I G152T L183R",3
"lib1","SARS-CoV-2","GCGACGCTGGTTATAG",3,34.65,10.6,-0.16,0.05,2.98,1,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","GCGACGGGGCCCCGTT",2,95,10.69,-0.07,0.04,2.9,1.05,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","GCGACGGTTTCCGTCA",8,2.34,NA,NA,NA,NA,NA,NA,"stop","F12* V115S L122P F167Y",4
"lib1","SARS-CoV-2","GCGACGTCCTAAATTT",2,18.37,8.49,-2.28,0.28,1.67,1.3,0.03,">1 nonsynonymous","Y91E L188V",2
"lib1","SARS-CoV-2","GCGACTAAGTACGAGA",4,126.16,10.68,-0.09,0.05,2.88,1.05,0,">1 nonsynonymous","S41E N120R",2
"lib1","SARS-CoV-2","GCGACTAAGTCTGCAG",9,159.72,8.48,-2.28,0.09,2.63,1.08,0,">1 nonsynonymous","A14E G166L",2
"lib1","SARS-CoV-2","GCGACTACAACATCAA",2,50.2,9.58,-1.18,0.15,2.17,1.18,0.01,">1 nonsynonymous","G9F L95M G155R",3
"lib1","SARS-CoV-2","GCGACTAGGTCTTTAA",6,11.34,8.01,-2.75,0.45,1.5,1,0.05,">1 nonsynonymous","W106D P177S L187Y",3
"lib1","SARS-CoV-2","GCGACTAGTAGCGCCA",4,0.81,NA,NA,NA,NA,NA,NA,"stop","F8* Q163R P197A",3
"lib1","SARS-CoV-2","GCGACTATGCATTAAG",10,117.34,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86L P133C N171A",3
"lib1","SARS-CoV-2","GCGACTCCCGTTCCTA",7,177.65,10.47,-0.3,0.04,2.88,1.02,0,">1 nonsynonymous","A89S L131V P191D",3
"lib1","SARS-CoV-2","GCGACTCGCCTATGTC",6,49.47,10.79,0.03,0.05,2.91,1.02,0,"1 nonsynonymous","Q84G",1
"lib1","SARS-CoV-2","GCGACTCTTCTAAGGG",1,28.2,10.5,-0.26,0.09,2.85,1.06,0,">1 nonsynonymous","T85E E141S",2
"lib1","SARS-CoV-2","GCGACTGATTCTTCGA",2,54.08,10.73,-0.03,0.07,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGACTGCTTAGTGCT",3,8.35,9.11,-1.66,0.38,1.5,1.02,0.05,">1 nonsynonymous","V52H D90V",2
"lib1","SARS-CoV-2","GCGACTGTCCTGAGTG",6,23.28,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","N1F I28R S45V C61D G83Y K198W",6
"lib1","SARS-CoV-2","GCGACTGTTGAAGCCT",4,191.15,10.29,-0.47,0.04,2.93,1,0,">1 nonsynonymous","L5S Y121I",2
"lib1","SARS-CoV-2","GCGACTTCAGGTGGCC",3,13.24,6.97,-3.8,2,1.5,1.1,0.01,">1 nonsynonymous","N64Q F99D V103F G172K",4
"lib1","SARS-CoV-2","GCGACTTCCATTTCCA",5,27.24,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","W23L G51C T100E F126M R136G T148G",6
"lib1","SARS-CoV-2","GCGAGAAGAGAAATTC",4,20.19,10.66,-0.1,0.07,2.94,1,0,">1 nonsynonymous","P149Q S164R",2
"lib1","SARS-CoV-2","GCGAGAATAGACGGCC",2,10.24,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18I G86N K94N R136C",4
"lib1","SARS-CoV-2","GCGAGAATGCAAAAAG",2,22.11,10.67,-0.09,0.06,2.94,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAGAATTCTCAGGT",1,32.56,10.69,-0.07,0.09,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAGAATTTGGTGGA",1,14.18,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C61R K87W Y121S F126D Q168S",5
"lib1","SARS-CoV-2","GCGAGACAACACTGTT",1,38.83,10.87,0.11,0.1,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGAGACACAAATATA",2,8.58,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","GCGAGACTAGACCCCT",4,79.11,10.68,-0.09,0.06,2.9,1.06,0,">1 nonsynonymous","I2V A18S L122A E141H",4
"lib1","SARS-CoV-2","GCGAGACTGCGCGGGC",4,79.04,10.73,-0.04,0.05,2.93,1.03,0,">1 nonsynonymous","Y35L S108T T201S",3
"lib1","SARS-CoV-2","GCGAGAGCCCTGACCC",4,46.64,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","L57Q I88F E141V E154T F167M",5
"lib1","SARS-CoV-2","GCGAGAGGACTACATT",2,7.08,NA,NA,NA,NA,NA,NA,"stop","A14F I28D F44V N110* K128D S139E",6
"lib1","SARS-CoV-2","GCGAGAGGGGCCAGGA",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G C158P K198T",3
"lib1","SARS-CoV-2","GCGAGATAACTTACAC",7,172.91,8.66,-2.11,0.08,2.78,1.12,0,">1 nonsynonymous","D97Y I142G P197M",3
"lib1","SARS-CoV-2","GCGAGATATTTAAAAA",3,45.76,10.22,-0.55,0.05,2.88,1,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","GCGAGCCTAGCCGAGT",6,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I A42K G86S N110A Y165P",5
"lib1","SARS-CoV-2","GCGAGCGATCCTCTAC",11,141.43,7.3,-3.46,0.26,1.5,1.13,0.02,"1 nonsynonymous","I80F",1
"lib1","SARS-CoV-2","GCGAGCTCAGCAAACG",3,0.48,NA,NA,NA,NA,NA,NA,"stop","G9I A33* S41F A105F Y121E S164Y G174* T201I",8
"lib1","SARS-CoV-2","GCGAGCTCCTATGACA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","F44Y E141Q N151* Q168T",4
"lib1","SARS-CoV-2","GCGAGCTTACAATGAA",1,41.17,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y21H L57P G117R",3
"lib1","SARS-CoV-2","GCGAGGAAAAATACCT",1,36.51,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S29H P82D L122H",3
"lib1","SARS-CoV-2","GCGAGGATGATTGGTC",3,59.69,6,-4.76,1.92,1.5,1.26,0.04,">1 nonsynonymous","D68Q G155R",2
"lib1","SARS-CoV-2","GCGAGGCAATGGCAAA",7,60.95,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C61R S69L L95N L162Q",4
"lib1","SARS-CoV-2","GCGAGGCATCTTATTA",7,166.13,10.09,-0.67,0.06,2.92,1.01,0,">1 nonsynonymous","F44V E154P",2
"lib1","SARS-CoV-2","GCGAGGGTCATATTCG",1,4.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","GCGAGGTTAGCCCACT",2,16.59,6,-4.76,2,3,1.18,0.03,">1 nonsynonymous","N1K A89E D98H",3
"lib1","SARS-CoV-2","GCGAGTAAGGAGACCT",2,19.87,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","Y21C C61S Q144M S184T",4
"lib1","SARS-CoV-2","GCGAGTAATACAACAC",7,141.44,10.81,0.04,0.05,2.89,1.08,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","GCGAGTAATACTCCGA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","S113* G152* Q168A",3
"lib1","SARS-CoV-2","GCGAGTACAATTGATC",5,5.67,NA,NA,NA,NA,NA,NA,"stop","L5* I88V C102N V173F",4
"lib1","SARS-CoV-2","GCGAGTACCTCTCCCT",1,14.77,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","E10S G101C",2
"lib1","SARS-CoV-2","GCGAGTAGAAAACTCC",1,78.72,10.3,-0.46,0.08,2.92,1,0,">1 nonsynonymous","R27E S45T L60S",3
"lib1","SARS-CoV-2","GCGAGTCCAACCAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y K56D",2
"lib1","SARS-CoV-2","GCGAGTGTGAACTCGC",2,49.48,10.22,-0.54,0.05,2.87,1.01,0,">1 nonsynonymous","C6D K199H",2
"lib1","SARS-CoV-2","GCGAGTTAATCATGAA",3,51.54,10.68,-0.09,0.06,2.87,1.07,0,">1 nonsynonymous","V37S S45A",2
"lib1","SARS-CoV-2","GCGAGTTATCACTATC",4,136.56,10.7,-0.07,0.04,2.94,1.02,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","GCGAGTTCACATATAT",1,2.26,NA,NA,NA,NA,NA,NA,"stop","G86D I104* Y119L K132E",4
"lib1","SARS-CoV-2","GCGAGTTGCCCCTCCT",1,5.01,7.45,-3.32,0.37,3,1.07,0.02,">1 nonsynonymous","N13P Y143A C150D",3
"lib1","SARS-CoV-2","GCGAGTTTGTACCAAT",7,62.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y D98Y R124C",3
"lib1","SARS-CoV-2","GCGATAAAATCTAAAC",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K N13R V65Q K87T",4
"lib1","SARS-CoV-2","GCGATAAATGCCAGAT",3,2.2,NA,NA,NA,NA,NA,NA,"stop","S45C V103L I142* Y178N",4
"lib1","SARS-CoV-2","GCGATAAATTTATGGG",1,20.66,9.08,-1.68,0.16,2.77,1.07,0.02,">1 nonsynonymous","Y39E T63H G117S",3
"lib1","SARS-CoV-2","GCGATAAGGTTACATC",7,20.37,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","G9E V32S G74P N118V R127S V173F",6
"lib1","SARS-CoV-2","GCGATAATCACATTGG",2,0,NA,NA,NA,NA,NA,NA,"stop","V11H A89R T100Y G117*",4
"lib1","SARS-CoV-2","GCGATAATGAACGCTG",4,47.76,10.23,-0.53,0.08,2.86,1.03,0,"1 nonsynonymous","C31A",1
"lib1","SARS-CoV-2","GCGATAATTGTCAATA",2,5.28,9.66,-1.11,0.3,2.2,1.13,0.02,">1 nonsynonymous","T15I A42W K56D G116Q",4
"lib1","SARS-CoV-2","GCGATAATTTTATTGC",1,24.43,9.57,-1.19,0.15,1.9,1.09,0.01,"1 nonsynonymous","Y178K",1
"lib1","SARS-CoV-2","GCGATACAACTCAAAG",1,31.52,9.97,-0.79,0.11,2.09,1.05,0.01,">1 nonsynonymous","N4L N40V F160A H189P",4
"lib1","SARS-CoV-2","GCGATACATCTGCCGG",4,73.55,7.41,-3.35,0.31,1.63,1.22,0.02,">1 nonsynonymous","T55L G86L",2
"lib1","SARS-CoV-2","GCGATACATTAACCTA",3,89.58,10.61,-0.15,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGATACCCAGGAATA",2,43.81,10.79,0.02,0.06,2.89,1.07,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","GCGATACCTCTTATAT",6,19.58,10.59,-0.18,0.07,2.82,1.07,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","GCGATACGCCTTGCCC",4,43.43,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6S F70S A81S Q84Y F185D",5
"lib1","SARS-CoV-2","GCGATACTTATCCGAC",9,198.39,8.67,-2.09,0.07,2.8,1.1,0,">1 nonsynonymous","E10S K56G G117H",3
"lib1","SARS-CoV-2","GCGATAGATTAGAATG",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H R124M S200V",3
"lib1","SARS-CoV-2","GCGATAGCATTTATTC",2,6.64,6,-4.76,2,3,1.31,0.06,">1 nonsynonymous","I28K T46S L57M K94L P149S",5
"lib1","SARS-CoV-2","GCGATAGGTATAACTT",4,10.84,6,-4.76,2,1.5,1.18,0.08,">1 nonsynonymous","P96M N107Y G196V",3
"lib1","SARS-CoV-2","GCGATAGTCAGTCATG",1,42.37,10.76,0,0.03,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGATATACTAGATGC",2,21.95,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","P82G Y119D A190N",3
"lib1","SARS-CoV-2","GCGATATATAAAGAAA",2,20.46,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G101W N107S L162W G174V C195L",5
"lib1","SARS-CoV-2","GCGATATCAGAAATGG",2,37.66,10.45,-0.31,0.09,2.86,1.12,0,">1 nonsynonymous","S53L I138L",2
"lib1","SARS-CoV-2","GCGATATGCAGCGATG",1,86.36,10.17,-0.59,0.07,2.57,1,0,">1 nonsynonymous","F12I R16K A33N L60V",4
"lib1","SARS-CoV-2","GCGATATTAAACGTTG",1,0.22,NA,NA,NA,NA,NA,NA,"stop","N64D N107* G117F L125P F160C",5
"lib1","SARS-CoV-2","GCGATATTATAATGCT",5,91.79,10.68,-0.09,0.05,2.94,1,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","GCGATCAATGTGGTCC",4,16.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6R S45V D98T V103Y S139V",5
"lib1","SARS-CoV-2","GCGATCACACCGTACG",5,63.2,6.3,-4.46,0.46,1.5,1.16,0.01,">1 nonsynonymous","Y91N W106R L122P Y175I",4
"lib1","SARS-CoV-2","GCGATCATACACCTTG",1,86.28,10.72,-0.04,0.07,2.93,1.05,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","GCGATCATATACATAC",3,65.77,10.16,-0.61,0.04,2.97,1,0,">1 nonsynonymous","A22T F156I",2
"lib1","SARS-CoV-2","GCGATCCGTGAGCAGT",10,41.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S45V Y93S",2
"lib1","SARS-CoV-2","GCGATCCGTTGCTTTT",3,53.04,9.92,-0.85,0.09,2.02,1.07,0,">1 nonsynonymous","L38T N58A",2
"lib1","SARS-CoV-2","GCGATCCTCCTAGCTG",7,90.03,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60R D68W",2
"lib1","SARS-CoV-2","GCGATCGACATTCCAC",4,28.92,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","I2R C61Q C102E Y123L",4
"lib1","SARS-CoV-2","GCGATCGTTGTCCCAA",1,2.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3D",1
"lib1","SARS-CoV-2","GCGATGACACAAGTGA",2,11.91,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K94E W106S L131Q",3
"lib1","SARS-CoV-2","GCGATGACTAAGACAT",3,25.92,10.55,-0.21,0.08,2.76,1.23,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGATGAGCCCTGCAA",6,25.72,7.47,-3.3,0.29,1.5,1.24,0.03,">1 nonsynonymous","K87Y K94E",2
"lib1","SARS-CoV-2","GCGATGAGTTAAGCCA",2,23.4,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","N30F S53V P82L V103Y T140R",5
"lib1","SARS-CoV-2","GCGATGATAGACGATG",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95W P197G",2
"lib1","SARS-CoV-2","GCGATGCATTGATAAT",7,94.09,6.39,-4.38,0.51,1.5,1.22,0.02,">1 nonsynonymous","F12P V37G F44R V173I",4
"lib1","SARS-CoV-2","GCGATGCGATTAGTAT",4,18.63,6,-4.76,1.52,1.5,1.1,0,">1 nonsynonymous","K56T N64V N92V R124V N130F C158T",6
"lib1","SARS-CoV-2","GCGATGTCGAAGGTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K F44P P133D",3
"lib1","SARS-CoV-2","GCGATGTCTAATGAAA",5,71.76,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3L N30L S43C N107C P161Y",5
"lib1","SARS-CoV-2","GCGATGTTTGATGCAT",4,1.14,NA,NA,NA,NA,NA,NA,"stop","F44T K87R V181*",3
"lib1","SARS-CoV-2","GCGATTAAAATAAGAA",2,8.49,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","A89L S147I C150H L187D",4
"lib1","SARS-CoV-2","GCGATTAAATTGTTTT",1,30.33,10.75,-0.02,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGATTACATTACAGT",8,42.28,7.26,-3.5,0.4,1.5,1.1,0.04,">1 nonsynonymous","A42D A105S L162S",3
"lib1","SARS-CoV-2","GCGATTACGAGGTTCA",3,21.53,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D34G F70R",2
"lib1","SARS-CoV-2","GCGATTATACTAGAAA",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V A105R F156W",3
"lib1","SARS-CoV-2","GCGATTATGCGAATGA",1,8.27,7.95,-2.82,0.28,1.65,1.08,0.05,">1 nonsynonymous","E76L N109I",2
"lib1","SARS-CoV-2","GCGATTATTTCTTTTA",6,88.55,10.07,-0.69,0.06,2.78,1.02,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","GCGATTCCTTGAAGGA",3,28.01,8.67,-2.09,0.15,2.42,1.03,0.01,">1 nonsynonymous","Q84C E135S T170E S200Y",4
"lib1","SARS-CoV-2","GCGATTCTCGTCCGAT",5,0.45,NA,NA,NA,NA,NA,NA,"stop","D97C N151S Q168*",3
"lib1","SARS-CoV-2","GCGATTGTTGCACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86V F99P K114L V153F K198*",5
"lib1","SARS-CoV-2","GCGATTTACTCACATA",1,6.51,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T15N A42D T55C K94F A105L Q144L",6
"lib1","SARS-CoV-2","GCGATTTCAAGCGTTA",3,13.4,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14G V103L",2
"lib1","SARS-CoV-2","GCGATTTTTCTCGGAC",1,74.37,10.82,0.06,0.08,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCAAACAGGGAATT",4,0.17,NA,NA,NA,NA,NA,NA,"stop","Y35M S41H N64G I104K N151E T201*",6
"lib1","SARS-CoV-2","GCGCAAACCACCACAC",2,57.69,10.71,-0.05,0.09,2.93,1.05,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","GCGCAAATAGTGGTAT",1,38.06,9.28,-1.49,0.15,1.5,1.11,0.01,"1 nonsynonymous","P82G",1
"lib1","SARS-CoV-2","GCGCAAATGAATAACG",1,45.42,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y35V Y119F C150L T201S",4
"lib1","SARS-CoV-2","GCGCAAATTAGATAAT",3,32.5,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N58T F99A G166F",3
"lib1","SARS-CoV-2","GCGCAAATTATTCCAC",5,144.23,9.99,-0.77,0.05,2.88,1.01,0,">1 nonsynonymous","R78V G155L",2
"lib1","SARS-CoV-2","GCGCAACAACAGATCT",5,75.87,8.4,-2.36,0.16,2.8,1.01,0.01,">1 nonsynonymous","L5E N171D",2
"lib1","SARS-CoV-2","GCGCAACAAGCCATAA",7,52.6,8.47,-2.3,0.09,2.22,1.09,0,">1 nonsynonymous","S139G Y175A S184K",3
"lib1","SARS-CoV-2","GCGCAACAGCATAGGG",9,138.82,10.77,0.01,0.05,2.94,1.02,0,"1 nonsynonymous","T3V",1
"lib1","SARS-CoV-2","GCGCAACATCTTGCAA",9,39.42,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D59V Y93S S113E",3
"lib1","SARS-CoV-2","GCGCAACATGCATGTT",2,50.91,10.62,-0.14,0.05,2.83,1.08,0,">1 nonsynonymous","S43C S129V",2
"lib1","SARS-CoV-2","GCGCAACCTTAAAACG",8,90.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18K R25P D90G T201A",4
"lib1","SARS-CoV-2","GCGCAACTTATTTTCA",1,5.99,9.48,-1.28,0.29,1.65,1.09,0.04,">1 nonsynonymous","K26S Y35I D137S",3
"lib1","SARS-CoV-2","GCGCAAGAAAGGGCAA",2,14.75,9.14,-1.62,0.21,1.75,1.07,0.02,">1 nonsynonymous","C61R P82L G174N",3
"lib1","SARS-CoV-2","GCGCAAGAAAGTTACT",6,1.34,NA,NA,NA,NA,NA,NA,"stop","L5H L38I V77R S113Q F160L Q168* N171V",7
"lib1","SARS-CoV-2","GCGCAAGGAGATAATT",7,94.55,10.68,-0.08,0.04,2.96,1.01,0,">1 nonsynonymous","S43Y F134S",2
"lib1","SARS-CoV-2","GCGCAAGTGGTAAAAG",2,22.08,6,-4.76,1.81,3,1.12,0,">1 nonsynonymous","F44D R78S V103K D112K T201S",5
"lib1","SARS-CoV-2","GCGCAAGTTCCAAACA",3,80.75,10.82,0.06,0.06,2.91,1.03,0,">1 nonsynonymous","L5S D97L",2
"lib1","SARS-CoV-2","GCGCAAGTTCTGGACT",1,13.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50L G51S L60I R136Y",4
"lib1","SARS-CoV-2","GCGCAATGCTGGCAAC",2,93.47,10.42,-0.35,0.05,2.85,1.03,0,"1 nonsynonymous","V52H",1
"lib1","SARS-CoV-2","GCGCAATGGAAACCAT",4,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","GCGCACAAGGAATAAC",3,109.85,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14H A89Y K94G G101A R127S",5
"lib1","SARS-CoV-2","GCGCACAATCCCAAGT",4,102.39,10.34,-0.42,0.05,2.82,1.08,0,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","GCGCACACTTCCATGA",1,48.13,9.45,-1.31,0.11,2.48,1.1,0,">1 nonsynonymous","L60P G174T",2
"lib1","SARS-CoV-2","GCGCACAGAAAGGTAT",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L V103F",2
"lib1","SARS-CoV-2","GCGCACCATTTTGTCC",2,54.74,9.99,-0.78,0.08,2.26,1.06,0,">1 nonsynonymous","F12M G83E",2
"lib1","SARS-CoV-2","GCGCACCCTACAGCGT",4,177.56,10.41,-0.35,0.04,2.94,1.03,0,"1 nonsynonymous","F156I",1
"lib1","SARS-CoV-2","GCGCACCGATTTTTTT",2,10.76,6.05,-4.72,0.83,3,1.16,0.02,">1 nonsynonymous","S45F L95A",2
"lib1","SARS-CoV-2","GCGCACGCACCTAACT",4,110.84,10.14,-0.62,0.06,2.96,1,0,">1 nonsynonymous","K26T L125S K198T",3
"lib1","SARS-CoV-2","GCGCACGTGAACATTC",9,0.81,NA,NA,NA,NA,NA,NA,"stop","A105D E154F S200*",3
"lib1","SARS-CoV-2","GCGCACTAAACAGCTA",1,7.48,6,-4.76,2,3,1.12,0.08,">1 nonsynonymous","F44D N64E C102G V115F",4
"lib1","SARS-CoV-2","GCGCACTTTAATCCTT",2,67.42,10.61,-0.16,0.06,2.92,1.03,0,">1 nonsynonymous","G9S T140E Q163S",3
"lib1","SARS-CoV-2","GCGCAGAAAAATTACA",6,16.4,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F44A C61M C102S",3
"lib1","SARS-CoV-2","GCGCAGAAACTGGCGT",6,64.08,10.77,0,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCAGAAATTTGAGC",1,24.37,10.69,-0.08,0.07,2.95,1,0,"1 nonsynonymous","S29G",1
"lib1","SARS-CoV-2","GCGCAGAATAGTATAA",4,70.64,8.31,-2.45,0.18,1.81,1.16,0.01,">1 nonsynonymous","S45V D59T G117N",3
"lib1","SARS-CoV-2","GCGCAGAATTATTAGA",3,84.54,10.72,-0.04,0.03,2.96,1,0,">1 nonsynonymous","E10K S200T",2
"lib1","SARS-CoV-2","GCGCAGACATGTACTG",3,36.33,7.11,-3.65,0.45,1.5,1.14,0.06,">1 nonsynonymous","N4Y A89R K128M",3
"lib1","SARS-CoV-2","GCGCAGACGCCTTCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* N64S N107Q",3
"lib1","SARS-CoV-2","GCGCAGGAATTCACGT",3,1.6,NA,NA,NA,NA,NA,NA,"stop","A18* S43* T55V G74L G116R V180I",6
"lib1","SARS-CoV-2","GCGCAGGCTTCAGACA",1,23.34,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V20K R27L Y39R F47L D97F K114T",6
"lib1","SARS-CoV-2","GCGCAGTAAAGGAACC",2,5217.93,10.61,-0.15,0.03,2.94,1.01,0,">1 nonsynonymous","L5R N58S",2
"lib1","SARS-CoV-2","GCGCAGTAAATATTCC",1,32.46,8.15,-2.62,0.35,1.5,1,0.06,">1 nonsynonymous","I28Q K48A A190F",3
"lib1","SARS-CoV-2","GCGCAGTCTTCTAATT",4,24.24,9.47,-1.3,0.25,1.71,1.05,0.03,">1 nonsynonymous","V77E N120M",2
"lib1","SARS-CoV-2","GCGCATAAATCAGGGG",5,75.91,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S29N W106A F167S E186D A192R",5
"lib1","SARS-CoV-2","GCGCATAACGCCTAAC",7,212.41,8.88,-1.89,0.08,2.59,1.13,0,">1 nonsynonymous","C61G N118R T140Q",3
"lib1","SARS-CoV-2","GCGCATAAGAAGGTAC",6,1074.19,10.77,0.01,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCATACCCATAGCT",2,17.73,10.29,-0.48,0.07,2.91,1,0,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","GCGCATACGGCTCAAC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib1","SARS-CoV-2","GCGCATACGTAATCAT",3,18,8.58,-2.18,0.35,1.5,1,0.06,">1 nonsynonymous","Y50H F70K D97W T201L",4
"lib1","SARS-CoV-2","GCGCATAGTTTGCTAA",4,12.45,8.41,-2.35,0.45,1.5,1.06,0.08,">1 nonsynonymous","T100M N109F G146W",3
"lib1","SARS-CoV-2","GCGCATATCATTTTCT",4,0.27,NA,NA,NA,NA,NA,NA,"stop","V20L G83L Y91*",3
"lib1","SARS-CoV-2","GCGCATATGACCACAT",1,32.67,10.72,-0.05,0.05,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCATATGTAATTAG",1,44.77,8.38,-2.38,0.34,1.5,1.08,0.04,">1 nonsynonymous","G9L V37Q A105Q",3
"lib1","SARS-CoV-2","GCGCATATTCTAGAAC",2,6.07,6,-4.76,2,3,1.11,0.03,">1 nonsynonymous","S41G N64F L95P Y119L",4
"lib1","SARS-CoV-2","GCGCATCAAACCACTA",1,41.2,10.69,-0.08,0.1,2.8,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCATCAGCCGTACC",3,23.33,10.74,-0.03,0.22,2.55,1.01,0.02,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","GCGCATCATGAACGTA",2,46.38,9.27,-1.5,0.16,1.97,1.21,0.01,">1 nonsynonymous","N4L K48M G116T G196F",4
"lib1","SARS-CoV-2","GCGCATCCGCAAACAG",3,50.29,10.76,-0.01,0.06,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCATCCTAGATCAA",16,689,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14R K94L N107S T201V",4
"lib1","SARS-CoV-2","GCGCATGATGCCATGA",2,51.37,9.56,-1.21,0.15,1.78,1.16,0.01,">1 nonsynonymous","A14T T63S D90Y E141S",4
"lib1","SARS-CoV-2","GCGCATGGCAATTTGA",4,29.64,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G9K C102D",2
"lib1","SARS-CoV-2","GCGCATGTTCCATGTT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib1","SARS-CoV-2","GCGCATTACCATACAG",2,32.94,10.53,-0.23,0.06,2.89,1.05,0,"1 nonsynonymous","S29F",1
"lib1","SARS-CoV-2","GCGCATTAGTTATACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F160T Q176R",2
"lib1","SARS-CoV-2","GCGCATTCAATCTATA",2,65.74,9.97,-0.79,0.09,2.45,1.02,0,">1 nonsynonymous","K48F F160L",2
"lib1","SARS-CoV-2","GCGCATTTCCTTCTCT",13,155.28,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D59I A105S G117A N130M Q144Y Y159S",6
"lib1","SARS-CoV-2","GCGCATTTTATTTAAG",5,61.74,10.74,-0.02,0.04,2.98,1.01,0,">1 nonsynonymous","L5N G83K",2
"lib1","SARS-CoV-2","GCGCCAAAACTATCTA",8,0.38,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","GCGCCAAAGAGGTGTC",1,40.48,8.57,-2.19,0.09,1.74,1.07,0.01,">1 nonsynonymous","T46C L60C D97F T170G",4
"lib1","SARS-CoV-2","GCGCCAAAGTCTCGTT",4,25.74,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","GCGCCAACTACACGAT",2,52.32,6,-4.76,1.63,1.5,1.19,0.01,">1 nonsynonymous","P7T F44A P54C R127S",4
"lib1","SARS-CoV-2","GCGCCAAGATGCGCCA",5,92.79,10.78,0.02,0.04,2.91,1.07,0,"1 nonsynonymous","K198R",1
"lib1","SARS-CoV-2","GCGCCAAGCAGACGCG",1,0.99,NA,NA,NA,NA,NA,NA,"stop","I2L F12* N64P Y119L",4
"lib1","SARS-CoV-2","GCGCCAATTCTTCCGG",8,43.56,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G86A N107P",2
"lib1","SARS-CoV-2","GCGCCACATCGATGAC",2,44.16,10.8,0.03,0.12,2.93,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCGCCACGGACTTTGT",3,27.06,10.6,-0.16,0.08,2.93,1.04,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","GCGCCACGTACTCCTT",2,27.98,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A105N R179D",2
"lib1","SARS-CoV-2","GCGCCAGTAAACAATA",3,14.71,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","I72D A81K R136K",3
"lib1","SARS-CoV-2","GCGCCATACGATAAGT",2,13.31,10.29,-0.47,0.16,2.05,1.03,0.01,">1 nonsynonymous","T85S P96C L188P",3
"lib1","SARS-CoV-2","GCGCCATACGTCCTCA",4,37.71,6.98,-3.79,0.36,1.5,1.16,0.02,"1 nonsynonymous","R124A",1
"lib1","SARS-CoV-2","GCGCCATATCAGACAT",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92P S184R",2
"lib1","SARS-CoV-2","GCGCCCAAAGATCACG",7,96.61,9.18,-1.58,0.13,2.34,1.17,0.01,"1 nonsynonymous","N107M",1
"lib1","SARS-CoV-2","GCGCCCCACATAACAA",1,23.5,10.86,0.1,0.08,3,1,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","GCGCCCCGAACAAGAC",9,414.72,10.21,-0.56,0.03,2.93,1.01,0,">1 nonsynonymous","T15S K128L F156R",3
"lib1","SARS-CoV-2","GCGCCCGGGCAGCGGC",7,49.91,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6W D137Y",2
"lib1","SARS-CoV-2","GCGCCCGTGTCCCCGG",5,14.2,6.99,-3.77,0.51,1.5,1.03,0.07,">1 nonsynonymous","S19V T46V P133T",3
"lib1","SARS-CoV-2","GCGCCGAAGGCTTACC",3,43.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9S L95V L122P P133V",4
"lib1","SARS-CoV-2","GCGCCGACATATTGAC",5,73.44,9.37,-1.39,0.07,2.83,1.08,0,">1 nonsynonymous","I72V N157S",2
"lib1","SARS-CoV-2","GCGCCGCCCGACAAAT",7,384.73,8.64,-2.12,0.1,2.66,1.04,0,">1 nonsynonymous","R16N Y119S F126V",3
"lib1","SARS-CoV-2","GCGCCGCTTTAGTACA",1,22.42,10.14,-0.62,0.12,2.65,1.07,0.01,">1 nonsynonymous","G9L T55H G83A A192S S200E",5
"lib1","SARS-CoV-2","GCGCCGGAAAATGAAT",1,5.78,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","K48M V103M G117R",3
"lib1","SARS-CoV-2","GCGCCGGCACTAATAT",6,21.39,10.1,-0.66,0.13,2.53,1.03,0.01,">1 nonsynonymous","N130S S139F",2
"lib1","SARS-CoV-2","GCGCCTAGATCCCTTT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C102P R136*",2
"lib1","SARS-CoV-2","GCGCCTATTAATTAAT",3,0.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46L",1
"lib1","SARS-CoV-2","GCGCCTCAATAAATCA",2,0,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","GCGCCTCGCTAATGCG",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V P96S G116K K128A C158Q Q176S T201R",7
"lib1","SARS-CoV-2","GCGCCTGATAGGCAGG",4,6.86,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","Y93A S113D",2
"lib1","SARS-CoV-2","GCGCCTGCAGATTCAC",1,14.15,10.49,-0.28,0.09,2.83,1.13,0.01,">1 nonsynonymous","V11I S41V T46M",3
"lib1","SARS-CoV-2","GCGCCTGTACTCTCGC",2,57.68,10.17,-0.6,0.08,2.59,1.02,0,">1 nonsynonymous","T46I L60C D90L",3
"lib1","SARS-CoV-2","GCGCGAAACGTTAGAC",6,109.53,10.63,-0.13,0.06,2.89,1.08,0,">1 nonsynonymous","Y35L F160I A190D",3
"lib1","SARS-CoV-2","GCGCGAAATAAGTAGA",10,1.19,NA,NA,NA,NA,NA,NA,"stop","T3A G9Y C49* F156I P177S",5
"lib1","SARS-CoV-2","GCGCGAATAAACAGAA",2,45.27,6,-4.76,1.13,1.5,1.17,0.01,">1 nonsynonymous","F8Q D68W D137A",3
"lib1","SARS-CoV-2","GCGCGAATTATTGTGT",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S F70S D98I A105G Y123M T201H",6
"lib1","SARS-CoV-2","GCGCGACATAACTCTC",9,75.8,10.65,-0.12,0.06,2.89,1.05,0,">1 nonsynonymous","T3H S129G",2
"lib1","SARS-CoV-2","GCGCGAGAATTTGGAA",5,154.51,10.74,-0.02,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCGAGACATATGAG",6,1.76,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","GCGCGAGATGAACTAT",3,26.69,6.03,-4.74,1.44,1.5,1.2,0.04,">1 nonsynonymous","G9V G172C",2
"lib1","SARS-CoV-2","GCGCGAGCACCTAGAC",1,49.72,10.02,-0.75,0.13,2.5,1.11,0.01,">1 nonsynonymous","D34I K114R L122Y",3
"lib1","SARS-CoV-2","GCGCGAGTCTTTACGA",4,32.18,9.24,-1.52,0.14,1.83,1.1,0.01,">1 nonsynonymous","R127L S200K",2
"lib1","SARS-CoV-2","GCGCGATTACCTTGTG",5,46.19,6.11,-4.65,0.86,1.5,1.19,0.02,">1 nonsynonymous","R27F V153Y C158L G174W",4
"lib1","SARS-CoV-2","GCGCGCAATTTCTTTT",1,19.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P A42G K56L P82I S164Y",5
"lib1","SARS-CoV-2","GCGCGCAGCAATGGCA",1,17.03,10.29,-0.47,0.13,2.7,1.01,0.01,">1 nonsynonymous","N64I E141A S164C T201S",4
"lib1","SARS-CoV-2","GCGCGCCAAAATAATT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S S41G",2
"lib1","SARS-CoV-2","GCGCGCGGTAATATCT",5,60.17,10.75,-0.02,0.06,2.9,1,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","GCGCGCTGACGAACGT",3,91.72,9.64,-1.13,0.06,2.78,1.07,0,">1 nonsynonymous","K87S E141C F160N",3
"lib1","SARS-CoV-2","GCGCGGAATCAACGAA",1,10.67,8.6,-2.17,0.34,1.5,1.07,0.08,">1 nonsynonymous","D75Y Y121T",2
"lib1","SARS-CoV-2","GCGCGGACTCCATCGA",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93E E141I",2
"lib1","SARS-CoV-2","GCGCGGGACATCTTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* I88T N130F G146D G174M",5
"lib1","SARS-CoV-2","GCGCGGGGCGCAGAGA",1,27.97,10.66,-0.11,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCGGTCCTGACACA",6,1.69,NA,NA,NA,NA,NA,NA,"stop","F8K A81V D90M V153* F160L G174M",6
"lib1","SARS-CoV-2","GCGCGGTTAAAGAAAA",7,102.31,6.37,-4.39,0.41,1.5,1.16,0.01,"1 nonsynonymous","G172D",1
"lib1","SARS-CoV-2","GCGCGTAAGAGACACA",1,8.92,6,-4.76,2,3,1.38,0.02,">1 nonsynonymous","R27V A42Y Y50P D68W N118Y G166I",6
"lib1","SARS-CoV-2","GCGCGTACGAAAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","R73Q L95* K114L T148L",4
"lib1","SARS-CoV-2","GCGCGTGATATTTAAA",2,64.26,8.1,-2.66,0.15,2.03,1.1,0.01,">1 nonsynonymous","N4T Y66S G146N P149S",4
"lib1","SARS-CoV-2","GCGCGTGCCACATCTT",1,56.4,8.38,-2.38,0.3,1.87,1.16,0.03,">1 nonsynonymous","D98Y L125C G146N P197E",4
"lib1","SARS-CoV-2","GCGCGTTAATACCCCT",2,61.8,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G9L R27I Y143F N151I Q163F G172N H189S",7
"lib1","SARS-CoV-2","GCGCTAAAAAATGACA",1,77.19,10.28,-0.48,0.04,2.86,1.05,0,">1 nonsynonymous","F44V K114F",2
"lib1","SARS-CoV-2","GCGCTAAACTATTGCT",5,3.91,NA,NA,NA,NA,NA,NA,"stop","T3V A14* C61K Y159S",4
"lib1","SARS-CoV-2","GCGCTAACCGCGCCAT",4,95.02,10.82,0.05,0.05,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCTAACCTCGTACT",1,17.42,8.56,-2.2,0.31,1.5,1.11,0.04,">1 nonsynonymous","A14T V37G G51D",3
"lib1","SARS-CoV-2","GCGCTAAGAATCTCGG",8,196.66,8.29,-2.47,0.18,1.85,1.09,0.01,">1 nonsynonymous","N64S W106L Y119F",3
"lib1","SARS-CoV-2","GCGCTAAGTTCGTGTC",4,68.52,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A18E R25G S43A A105V",4
"lib1","SARS-CoV-2","GCGCTAATCTTTCAGG",1,12.86,8.56,-2.21,0.15,2.98,1.12,0.01,"1 nonsynonymous","N157E",1
"lib1","SARS-CoV-2","GCGCTAATTTCATACA",4,12.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F44R E76T",2
"lib1","SARS-CoV-2","GCGCTACAACGCATTG",3,28.61,6.78,-3.99,0.7,1.5,1.23,0.07,">1 nonsynonymous","D34C N120K P161R",3
"lib1","SARS-CoV-2","GCGCTACCGGGTTTGC",1,7.51,6,-4.76,2,3,1.04,0,">1 nonsynonymous","A105L S113I V180G",3
"lib1","SARS-CoV-2","GCGCTATACAGCTACA",7,66.03,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","K48S S139F C150H",3
"lib1","SARS-CoV-2","GCGCTATATCTTAGAA",3,13.73,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N64R V103D E141L",3
"lib1","SARS-CoV-2","GCGCTATCACGGGTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","T15Y V77* Y121P C150V K198G",5
"lib1","SARS-CoV-2","GCGCTCAACTTGGCAA",1,9.73,8.92,-1.84,0.29,1.5,1.12,0.03,">1 nonsynonymous","C6Y I28T Y39W Y121F",4
"lib1","SARS-CoV-2","GCGCTCACAGACCACT",1,20.07,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","Y35S S45M S69G G174L T201Y",5
"lib1","SARS-CoV-2","GCGCTCACCCACATGA",7,53.42,10.77,0,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGCTCACTTTCATAA",4,0.66,NA,NA,NA,NA,NA,NA,"stop","D90T D98* G152D K198R",4
"lib1","SARS-CoV-2","GCGCTCAGCAATAACA",7,70.87,10.53,-0.23,0.08,2.88,1.02,0,">1 nonsynonymous","G9F F62L",2
"lib1","SARS-CoV-2","GCGCTCAGCGAAAATT",1,24.09,10.19,-0.58,0.09,2.8,1.04,0,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","GCGCTCATGACACACA",5,30.03,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","G86L G101Y L131T",3
"lib1","SARS-CoV-2","GCGCTCATTAAACGTT",6,57.79,10.34,-0.42,0.07,2.89,1,0,"1 nonsynonymous","G51A",1
"lib1","SARS-CoV-2","GCGCTCCAAGATGCAT",4,18.9,8.35,-2.42,0.21,1.87,1.12,0.02,">1 nonsynonymous","F62Y S69R G166R",3
"lib1","SARS-CoV-2","GCGCTCCCATATCGCT",2,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","GCGCTCCGATCACCCA",10,4.21,NA,NA,NA,NA,NA,NA,"stop","G51A A67Y D97L G116D G146M G155* F167R V180A",8
"lib1","SARS-CoV-2","GCGCTCCTCTAAACCT",3,248.32,10.07,-0.69,0.03,2.91,1.03,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","GCGCTCGCTTTCAACT",9,46.11,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N1K A89V E135L N151T",4
"lib1","SARS-CoV-2","GCGCTCTAAGCTCTAA",8,213.59,9.94,-0.83,0.07,2.1,1.05,0,">1 nonsynonymous","A14D Y35K",2
"lib1","SARS-CoV-2","GCGCTCTAGGCCACAA",12,0.74,NA,NA,NA,NA,NA,NA,"stop","S36K P96* K132C E186R",4
"lib1","SARS-CoV-2","GCGCTCTCATATCATG",1,10.25,7.04,-3.72,0.5,1.5,1.13,0.05,">1 nonsynonymous","F12R A67Y G146R",3
"lib1","SARS-CoV-2","GCGCTGAAATTGAGCT",9,12.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13S S41A Y93T K128H",4
"lib1","SARS-CoV-2","GCGCTGACTAGTTTCT",7,47.76,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F62R F99D",2
"lib1","SARS-CoV-2","GCGCTGATAGTCCTAG",3,10.81,10.24,-0.52,0.15,2.66,1,0.01,">1 nonsynonymous","S45C V173F",2
"lib1","SARS-CoV-2","GCGCTGATTTAACGTG",2,1.48,NA,NA,NA,NA,NA,NA,"stop","I72C V103L W106* S139F",4
"lib1","SARS-CoV-2","GCGCTGGTCCTATACC",10,0.77,NA,NA,NA,NA,NA,NA,"stop","S19* Y143M",2
"lib1","SARS-CoV-2","GCGCTGGTTTCATCGG",1,13.14,6.37,-4.4,0.83,1.58,1.16,0.03,">1 nonsynonymous","F44D D112W V115L R127T L183S",5
"lib1","SARS-CoV-2","GCGCTGTAATCGCAGC",17,50.26,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P7H D98L S113M R136L F167N",5
"lib1","SARS-CoV-2","GCGCTTAAATTGAAAC",6,47.8,10.16,-0.6,0.08,2.64,1.03,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","GCGCTTAAGAATAACA",1,30.93,9.92,-0.85,0.16,2.12,1.06,0.01,"1 nonsynonymous","Y165W",1
"lib1","SARS-CoV-2","GCGCTTACAATCAAAC",1,31.67,6,-4.76,2,2.31,1.21,0.02,">1 nonsynonymous","Y93M D98L",2
"lib1","SARS-CoV-2","GCGCTTAGATAAACGA",13,114.2,6.37,-4.4,0.45,1.5,1.23,0.02,">1 nonsynonymous","D90H K128C T148W N171I",4
"lib1","SARS-CoV-2","GCGCTTAGTGCATCGA",4,77.58,10.77,0.01,0.04,2.92,1.03,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","GCGCTTATGCGCATGT",3,20.38,10.16,-0.61,0.06,2.87,1.04,0,">1 nonsynonymous","V103I E141R",2
"lib1","SARS-CoV-2","GCGCTTCAAAACGAAT",2,1.02,NA,NA,NA,NA,NA,NA,"stop","T46* Y93C",2
"lib1","SARS-CoV-2","GCGCTTCGATCTGCGT",7,22.85,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A14S P82R F99P S108F",4
"lib1","SARS-CoV-2","GCGCTTCGTATCCAAG",3,7.46,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","A67F A145R V180K",3
"lib1","SARS-CoV-2","GCGCTTCTCGCTATCT",8,87.12,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","A14C G74R K94N N118S",4
"lib1","SARS-CoV-2","GCGCTTGTTTAAGCAT",3,0.45,NA,NA,NA,NA,NA,NA,"stop","S147*",1
"lib1","SARS-CoV-2","GCGCTTTCGCTTATTA",1,13.23,10.19,-0.57,0.16,2.78,1,0.01,">1 nonsynonymous","N64K S129L",2
"lib1","SARS-CoV-2","GCGCTTTGATGCACTT",2,25.44,6.62,-4.14,0.21,2.61,1.21,0,">1 nonsynonymous","L131V Y143R",2
"lib1","SARS-CoV-2","GCGGAAAAACCAACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37S G83F I88D S113Y L131T C158*",6
"lib1","SARS-CoV-2","GCGGAAAATGCGAACG",2,30.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10Q Y93I Y178P",3
"lib1","SARS-CoV-2","GCGGAAAATTTGTACT",16,231.36,10.73,-0.03,0.07,2.86,1.09,0,"1 nonsynonymous","V37K",1
"lib1","SARS-CoV-2","GCGGAAAGTAGCCGAA",1,23.85,10.42,-0.35,0.14,2.83,1,0.01,">1 nonsynonymous","N1K S41P G152S",3
"lib1","SARS-CoV-2","GCGGAAATAATATCGC",5,44.81,10.08,-0.68,0.05,2.77,1.07,0,">1 nonsynonymous","N1G G9S L60K F134L",4
"lib1","SARS-CoV-2","GCGGAACATGCGTTTC",6,13.14,NA,NA,NA,NA,NA,NA,"stop","G9C L95F V103*",3
"lib1","SARS-CoV-2","GCGGAAGAAAACTCAA",5,117.85,6,-4.76,1.49,1.5,1.16,0.01,">1 nonsynonymous","V37P L95A",2
"lib1","SARS-CoV-2","GCGGAAGCACTCTAAG",16,51.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C31R C49L",2
"lib1","SARS-CoV-2","GCGGAAGCCAATCAAG",1,29.88,10.07,-0.69,0.09,2.85,1.08,0,">1 nonsynonymous","T55S P169D",2
"lib1","SARS-CoV-2","GCGGAATCAGACGGTA",1,19.53,9.54,-1.23,0.23,2.62,1,0.02,">1 nonsynonymous","V52M G152M F160L",3
"lib1","SARS-CoV-2","GCGGAATCAGGTCCTA",6,109.17,10.06,-0.7,0.1,2.54,1.03,0,">1 nonsynonymous","A18G K94N",2
"lib1","SARS-CoV-2","GCGGAATCATATACAG",4,46.26,9.98,-0.79,0.09,2.5,1.03,0,">1 nonsynonymous","V52Q Q84T",2
"lib1","SARS-CoV-2","GCGGACAATTACTGCG",4,44.1,9.16,-1.61,0.09,1.76,1.11,0,">1 nonsynonymous","F62V Y121V E141I",3
"lib1","SARS-CoV-2","GCGGACAGAGCTCTCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V N64M",2
"lib1","SARS-CoV-2","GCGGACATGGTTTCTA",1,15.74,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V37S L57S V115L Q144C G152T",5
"lib1","SARS-CoV-2","GCGGACCAATCTTACT",1,10.99,10.04,-0.72,0.26,2.26,1,0.03,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","GCGGACGGTACTACAA",4,59.32,10.1,-0.66,0.12,2.39,1.05,0.01,">1 nonsynonymous","S36L N64R E135A",3
"lib1","SARS-CoV-2","GCGGACGTACACTATG",3,83.66,7.54,-3.22,0.27,1.5,1.19,0.02,">1 nonsynonymous","T63F S113R",2
"lib1","SARS-CoV-2","GCGGACTATACAAAAC",3,55.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V37G N40D L95Q C150E",4
"lib1","SARS-CoV-2","GCGGAGACAATTTTGG",3,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L Q144W P169T G174R",4
"lib1","SARS-CoV-2","GCGGAGACAGCATTTC",2,10.94,9.82,-0.95,0.34,2.18,1,0.04,"1 nonsynonymous","L131P",1
"lib1","SARS-CoV-2","GCGGAGATTAGACAGA",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S F8M T85S D90P K114M",5
"lib1","SARS-CoV-2","GCGGAGCGACCATTTA",6,48.74,10.74,-0.03,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGGAGGAACGAATTG",4,70.24,10.12,-0.65,0.1,2.56,1.05,0,">1 nonsynonymous","S41L K48S K56V",3
"lib1","SARS-CoV-2","GCGGAGGATCCGGGGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","GCGGAGGCAATACGGT",5,47.73,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C61G D75L V103G T201L",4
"lib1","SARS-CoV-2","GCGGAGGCGCGGATTA",1,29.51,10.15,-0.61,0.09,3,1,0,"1 nonsynonymous","C31T",1
"lib1","SARS-CoV-2","GCGGATACAAAACATT",1,3.12,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCGGATACTATAGCCA",7,95.03,10.64,-0.13,0.07,2.86,1.05,0,">1 nonsynonymous","N24D S129T",2
"lib1","SARS-CoV-2","GCGGATAGGAAGCGCA",2,61.94,10.19,-0.58,0.08,2.73,1.01,0,">1 nonsynonymous","A33P Y123C",2
"lib1","SARS-CoV-2","GCGGATCCCATGCTAT",1,20.35,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","C150Y P169N V173C C195F",4
"lib1","SARS-CoV-2","GCGGATCCGATTCTTC",7,158.97,10.78,0.01,0.05,2.93,1.01,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GCGGATCCGCCCGGGT",3,31,10.86,0.1,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGGATCTAAAAACAT",3,30.4,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","R124V S147V T193I T201M",4
"lib1","SARS-CoV-2","GCGGATCTAAAGAGTA",2,7.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36E Y93I V103K Q163S",4
"lib1","SARS-CoV-2","GCGGATCTCACAAATG",9,62.84,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55G N92S F99P",3
"lib1","SARS-CoV-2","GCGGATGAGTGCCTTT",4,16.62,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","D98A N130S C150R",3
"lib1","SARS-CoV-2","GCGGATGGGAATTGCC",4,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T C49Y C61Y F99K",4
"lib1","SARS-CoV-2","GCGGATTAAATTCTCG",3,38.47,6.59,-4.17,0.29,1.5,1.1,0.01,">1 nonsynonymous","S113L E135G",2
"lib1","SARS-CoV-2","GCGGATTATGACCCGA",1,10.07,9.72,-1.04,0.14,2.34,1.08,0.01,">1 nonsynonymous","N64V D90L G152L H189Q",4
"lib1","SARS-CoV-2","GCGGATTCTAAATCAT",9,76.77,10.41,-0.35,0.05,2.8,1.07,0,"1 nonsynonymous","I104T",1
"lib1","SARS-CoV-2","GCGGATTTGATTAGGG",1,54.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27W L95Q",2
"lib1","SARS-CoV-2","GCGGATTTTAGTTAAA",1,59.85,10.78,0.01,0.07,2.87,1.09,0,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","GCGGCAAAAACCAAGC",2,41.49,NA,NA,NA,NA,NA,NA,"stop","S45P G86D V103* N130D I142R",5
"lib1","SARS-CoV-2","GCGGCAAAATTCTGAG",3,135.44,10.64,-0.12,0.04,2.93,1,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","GCGGCAAGGAATAGCT",5,78.06,10.4,-0.37,0.04,2.89,1.01,0,">1 nonsynonymous","L60R A81R T100V",3
"lib1","SARS-CoV-2","GCGGCAATTATGGGCC",1,29.06,6,-4.76,0.84,1.89,1.14,0.02,">1 nonsynonymous","L60N A81R K94S E135R T201L",5
"lib1","SARS-CoV-2","GCGGCACCTAAATGCC",2,24.47,9.23,-1.54,0.08,1.89,1.08,0,">1 nonsynonymous","R27C F99Y T140V",3
"lib1","SARS-CoV-2","GCGGCACTAAACATCG",4,44.03,10.72,-0.04,0.08,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGGCATATAAGTCCG",5,95.75,10.61,-0.15,0.04,2.91,1.01,0,">1 nonsynonymous","L60H S129Y",2
"lib1","SARS-CoV-2","GCGGCATCTTAAGGAC",2,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24A Y50R K128T I142N",4
"lib1","SARS-CoV-2","GCGGCCCCAACCGCAG",8,60.54,10.57,-0.19,0.06,2.89,1.06,0,">1 nonsynonymous","N1V Y35I T55D C61R L122F",5
"lib1","SARS-CoV-2","GCGGCCTACGGATACG",6,501.69,9.47,-1.3,0.16,1.5,1,0.01,">1 nonsynonymous","I28K T55V",2
"lib1","SARS-CoV-2","GCGGCCTTTACCCGGA",8,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I A81V I88K F99K",4
"lib1","SARS-CoV-2","GCGGCGACACAACTTA",3,48.81,6.02,-4.74,0.75,1.5,1.18,0.01,">1 nonsynonymous","W106Q R127Y",2
"lib1","SARS-CoV-2","GCGGCGCACCGTCAAT",5,71.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A89L G166P Y178S",3
"lib1","SARS-CoV-2","GCGGCGGATTAGGTTA",7,131.13,8.97,-1.79,0.07,2.8,1.07,0,">1 nonsynonymous","N58H G117L",2
"lib1","SARS-CoV-2","GCGGCGGGCACGCCCC",4,42.56,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G86D P149K R179G",3
"lib1","SARS-CoV-2","GCGGCGTCCAAAACTT",5,109.91,10.73,-0.03,0.07,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GCGGCTAATGCTCACA",9,187.28,10.64,-0.13,0.06,2.78,1.06,0,">1 nonsynonymous","V37G K114Q T201N",3
"lib1","SARS-CoV-2","GCGGCTACGATCAGGC",3,35.77,10.54,-0.22,0.07,2.88,1.08,0,"1 nonsynonymous","T100W",1
"lib1","SARS-CoV-2","GCGGCTCCCAAGAACC",1,22.88,10.13,-0.64,0.08,2.63,1,0,">1 nonsynonymous","S36T K56P",2
"lib1","SARS-CoV-2","GCGGCTGAAACCTATA",2,12.91,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","I28E R124G I142G G155S",4
"lib1","SARS-CoV-2","GCGGCTGAGGAAAGAA",12,126.67,10.66,-0.11,0.04,2.9,1.04,0,">1 nonsynonymous","T3P K87R",2
"lib1","SARS-CoV-2","GCGGGAAAACACTCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35Q G101Y C150K A190Y K198* T201D",6
"lib1","SARS-CoV-2","GCGGGAAACGTGTCTA",1,85.01,10.77,0.01,0.07,2.94,1.01,0,">1 nonsynonymous","I2S A192L G196I",3
"lib1","SARS-CoV-2","GCGGGAAACTTGGGCG",4,22.22,10.55,-0.21,0.05,2.95,1.05,0,">1 nonsynonymous","N64Y K87R T193R",3
"lib1","SARS-CoV-2","GCGGGAACCATACAAA",3,54.59,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S19E N40K A81L F134H",4
"lib1","SARS-CoV-2","GCGGGACTTAACGGTG",1,21.14,6.87,-3.89,0.44,1.5,1.1,0.04,">1 nonsynonymous","C6G G51S Y165G G196T",4
"lib1","SARS-CoV-2","GCGGGAGCCAACGCAT",2,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q A33N D97S V153R",4
"lib1","SARS-CoV-2","GCGGGATTGCCCGAGG",2,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M A42S K94M F99Y N110L F126L",6
"lib1","SARS-CoV-2","GCGGGCAACTTAAACA",5,31.35,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","S41M C49R D97R",3
"lib1","SARS-CoV-2","GCGGGCAAGGTGTATG",2,18.1,10.17,-0.59,0.09,2.83,1.12,0,">1 nonsynonymous","V71I S164V",2
"lib1","SARS-CoV-2","GCGGGCAATTCCAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","F17L Y39L N58*",3
"lib1","SARS-CoV-2","GCGGGCACTTAAGAGC",4,0.71,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GCGGGCCATTTATCAA",4,184.4,10.02,-0.75,0.05,2.9,1,0,">1 nonsynonymous","I2Y Y119R H189Y",3
"lib1","SARS-CoV-2","GCGGGCCCAACAGTCA",4,172.58,10.44,-0.33,0.05,2.88,1.05,0,">1 nonsynonymous","F12I F62M",2
"lib1","SARS-CoV-2","GCGGGCCCCCATCCCC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","C61V N64L T85* E141R",4
"lib1","SARS-CoV-2","GCGGGCCTATGGCATT",6,1.67,NA,NA,NA,NA,NA,NA,"stop","P54A I72V P149*",3
"lib1","SARS-CoV-2","GCGGGCGAAGCCCCAT",1,111.73,10.55,-0.22,0.04,2.9,1.04,0,">1 nonsynonymous","V37T G83S K128R",3
"lib1","SARS-CoV-2","GCGGGCGCCGACGCCA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","R27G V103* L111S",3
"lib1","SARS-CoV-2","GCGGGCGCTACCAGCC",7,28.63,6.48,-4.28,0.6,1.5,1.26,0.03,">1 nonsynonymous","G9D N58E V103L P191L",4
"lib1","SARS-CoV-2","GCGGGGATGTCTCTAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T15V Y50K K94*",3
"lib1","SARS-CoV-2","GCGGGGCCAACGATAT",3,18.25,6.93,-3.83,0.35,1.5,1.14,0.03,">1 nonsynonymous","A22T G86N P149L",3
"lib1","SARS-CoV-2","GCGGGGGGTCGGATAT",10,68.41,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61L G74A Y91T N107D G172S",5
"lib1","SARS-CoV-2","GCGGGTAAGTTACAAC",5,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H G51C C158Y",3
"lib1","SARS-CoV-2","GCGGGTCGAAATTCTA",4,26.35,10.62,-0.14,0.14,2.54,1.05,0.01,">1 nonsynonymous","N1G L60Y L95I Y123L T201K",5
"lib1","SARS-CoV-2","GCGGGTCTAGGTACGC",2,12.92,7.67,-3.09,0.37,1.5,1.06,0.08,">1 nonsynonymous","Y93S F99P",2
"lib1","SARS-CoV-2","GCGGGTGTGAGGCATG",6,10.35,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N58R F99Y S113R N120K",4
"lib1","SARS-CoV-2","GCGGGTGTTGTTAATA",2,38.97,10.75,-0.02,0.08,2.93,1.04,0,">1 nonsynonymous","V37N T46L V173L",3
"lib1","SARS-CoV-2","GCGGGTTCAATAAAGT",2,21.84,7.04,-3.72,0.38,1.5,1.03,0.05,">1 nonsynonymous","G86H R127A T201I",3
"lib1","SARS-CoV-2","GCGGTAAAATGTCTAC",3,62.71,9.04,-1.72,0.07,2.8,1.13,0,">1 nonsynonymous","Y119A E135T",2
"lib1","SARS-CoV-2","GCGGTAAACCCCAACA",4,48.59,8.16,-2.6,0.22,1.5,1.12,0.02,">1 nonsynonymous","C6L A89V K198G",3
"lib1","SARS-CoV-2","GCGGTAACAAGGATCC",4,52.41,9.8,-0.97,0.09,2.59,1.07,0,">1 nonsynonymous","G9R K87E",2
"lib1","SARS-CoV-2","GCGGTAAGATAGGATT",9,1.55,NA,NA,NA,NA,NA,NA,"stop","P7L F44T I72P G86* W106P",5
"lib1","SARS-CoV-2","GCGGTAAGTTTAACTA",9,1.86,NA,NA,NA,NA,NA,NA,"stop","R16N S45C D68K R127* E135S",5
"lib1","SARS-CoV-2","GCGGTACATGATCAAG",4,25.21,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14W L95M T170D",3
"lib1","SARS-CoV-2","GCGGTACATTCCATAC",2,0.71,NA,NA,NA,NA,NA,NA,"stop","N40F E76S P82* R127S T201W",5
"lib1","SARS-CoV-2","GCGGTACTGCAGTATT",1,20.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y35A V103P",2
"lib1","SARS-CoV-2","GCGGTAGATTTGTTTC",9,12.38,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13Y I88T F99R C158T R179L",5
"lib1","SARS-CoV-2","GCGGTATCCACTTAAA",8,24.61,7.41,-3.35,0.39,1.5,1.19,0.04,">1 nonsynonymous","C61H G83F C102K",3
"lib1","SARS-CoV-2","GCGGTATTGTTACAGC",3,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84A L95D C102H R136V",4
"lib1","SARS-CoV-2","GCGGTCAACCTATTGT",9,49.82,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T3G A22Y Y93G R127M",4
"lib1","SARS-CoV-2","GCGGTCAGTCTAACAT",3,1.32,NA,NA,NA,NA,NA,NA,"stop","D34K A67P V115F L131* G146R",5
"lib1","SARS-CoV-2","GCGGTCATATCACAGT",1,10.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12N Y35K F47R V103A N151T",5
"lib1","SARS-CoV-2","GCGGTCTGCCTTAACT",4,66.28,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","L60H D97S N157I",3
"lib1","SARS-CoV-2","GCGGTCTTCCTTCAAT",3,58.5,8.44,-2.33,0.24,1.5,1.04,0.02,">1 nonsynonymous","R25E P149Y",2
"lib1","SARS-CoV-2","GCGGTCTTTTCATCAG",8,128.9,10.67,-0.09,0.05,2.89,1.07,0,"1 nonsynonymous","P191T",1
"lib1","SARS-CoV-2","GCGGTGAAAAATTTCC",2,41.85,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L38F G51E N64L W106A R124A V153R F185Y",7
"lib1","SARS-CoV-2","GCGGTGAAATGAAACA",2,20.73,8.58,-2.19,0.15,2.8,1.14,0.01,">1 nonsynonymous","S36G N171P",2
"lib1","SARS-CoV-2","GCGGTGAATACCTTGG",3,1.93,NA,NA,NA,NA,NA,NA,"stop","F8L S29* V77L K87F P96T P149H",6
"lib1","SARS-CoV-2","GCGGTGACCATGCTTT",8,330.03,10.03,-0.73,0.04,2.89,1.03,0,">1 nonsynonymous","P177A T201V",2
"lib1","SARS-CoV-2","GCGGTGACTTACGTAC",2,83.22,9.81,-0.96,0.1,2.01,1.06,0,">1 nonsynonymous","L5M K94D H189D T201S",4
"lib1","SARS-CoV-2","GCGGTGATGGCCCCGC",2,8.04,6,-4.76,0.95,3,1.06,0,">1 nonsynonymous","S41I G101Q",2
"lib1","SARS-CoV-2","GCGGTGCAAAACTAAC",4,41.17,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S41R C61I D90C D98S L122T L162A N171V P177V",8
"lib1","SARS-CoV-2","GCGGTGCAAATATTTT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","A33* K94G",2
"lib1","SARS-CoV-2","GCGGTGCAAGGCCAGG",1,28.7,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D68I G83V N151M",3
"lib1","SARS-CoV-2","GCGGTGCAGGCAGCCG",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63V Q84R",2
"lib1","SARS-CoV-2","GCGGTGCCAACACAAT",10,2.95,NA,NA,NA,NA,NA,NA,"stop","Y50* T201D",2
"lib1","SARS-CoV-2","GCGGTGCCACATAAAT",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146V L183P",2
"lib1","SARS-CoV-2","GCGGTGGAAAAACCCA",4,11.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95R S200R",2
"lib1","SARS-CoV-2","GCGGTGGAACCTCACC",5,62.02,10.19,-0.57,0.06,2.89,1.01,0,">1 nonsynonymous","G9Y S36T D59W E154S",4
"lib1","SARS-CoV-2","GCGGTGGAACTTAACA",3,57,10.87,0.11,0.06,2.95,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GCGGTGGCCTTCACCA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A K56D Y93W I104L E141L G155D V173L K198L",8
"lib1","SARS-CoV-2","GCGGTGTCTCTCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M S45K S147D L183H",4
"lib1","SARS-CoV-2","GCGGTTGCAATAGACA",3,200.91,8.79,-1.97,0.09,2.17,1.12,0,">1 nonsynonymous","S41G P161T",2
"lib1","SARS-CoV-2","GCGGTTGCCATTAACT",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G W106K S129R G146S",4
"lib1","SARS-CoV-2","GCGGTTTTGGATGAAG",1,25.21,10.82,0.06,0.1,2.85,1.09,0,">1 nonsynonymous","Y35F S164F",2
"lib1","SARS-CoV-2","GCGTAAAAAAACGACA",2,38.35,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37F N64K G83F N107F I142G G172K",6
"lib1","SARS-CoV-2","GCGTAAACCACAATGT",5,145.71,9.23,-1.53,0.06,2.82,1.12,0,">1 nonsynonymous","A42V T170L",2
"lib1","SARS-CoV-2","GCGTAAACCTTAATTA",8,37.16,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","F44S V181R",2
"lib1","SARS-CoV-2","GCGTAAAGCATTATGA",3,91.61,10.11,-0.66,0.04,2.83,1,0,">1 nonsynonymous","G9V V11F I28M C61H V194I",5
"lib1","SARS-CoV-2","GCGTAAAGCTAACGAG",2,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L P177R",2
"lib1","SARS-CoV-2","GCGTAAATACTATAAT",1,13.3,10.62,-0.15,0.14,2.99,1,0,">1 nonsynonymous","I2S F160D",2
"lib1","SARS-CoV-2","GCGTAACAATCCTTTG",10,193.34,9.86,-0.9,0.1,1.96,1.06,0,"1 nonsynonymous","L38K",1
"lib1","SARS-CoV-2","GCGTAACCGCATATTA",4,37.34,6,-4.76,2,3,1.13,0,">1 nonsynonymous","D68K Y119A",2
"lib1","SARS-CoV-2","GCGTAACCTAACTTAC",2,8.67,7.61,-3.16,0.48,1.5,1,0.06,">1 nonsynonymous","A81L S139I T201L",3
"lib1","SARS-CoV-2","GCGTAACCTGTAATAT",2,0.97,NA,NA,NA,NA,NA,NA,"stop","A33P K48* N107M",3
"lib1","SARS-CoV-2","GCGTAAGACACAAACA",2,15.92,8.91,-1.86,0.13,2.58,1.11,0.01,">1 nonsynonymous","V37W Y123I Q168L",3
"lib1","SARS-CoV-2","GCGTAAGATAAATACG",4,55.53,8.85,-1.91,0.05,2.92,1.09,0,">1 nonsynonymous","G9S N157H",2
"lib1","SARS-CoV-2","GCGTAAGATGTAACAG",2,10.29,10.34,-0.43,0.12,2.96,1.02,0.01,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","GCGTAAGCGGGTATTC",6,29.34,6.42,-4.35,0.4,1.5,1.11,0.01,">1 nonsynonymous","G9R W106T N118T K132Q",4
"lib1","SARS-CoV-2","GCGTAATAGTAGAAAA",4,28.69,8.84,-1.92,0.14,1.5,1.08,0.01,">1 nonsynonymous","L38S P133S",2
"lib1","SARS-CoV-2","GCGTAATCAACTACGC",4,112.15,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12Q N40L N64G R78W",4
"lib1","SARS-CoV-2","GCGTAATCCTACGACT",2,12.81,8.43,-2.33,0.21,1.53,1.03,0.01,">1 nonsynonymous","L38V N64L Q79L",3
"lib1","SARS-CoV-2","GCGTAATTTAGTATCA",9,119.49,10.75,-0.02,0.06,2.94,1.03,0,"1 nonsynonymous","S200I",1
"lib1","SARS-CoV-2","GCGTACAACAATCACT",2,8.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35L I104E",2
"lib1","SARS-CoV-2","GCGTACAACAGACGCG",1,10.34,6,-4.76,1.23,3,1.02,0,">1 nonsynonymous","N30I S41P G83M V103A",4
"lib1","SARS-CoV-2","GCGTACACTCCCACAC",5,31.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D59M K87G S113Q G146R",4
"lib1","SARS-CoV-2","GCGTACATAACCGTCA",3,17.01,10.8,0.03,0.07,2.95,1.04,0,">1 nonsynonymous","Q168A A190G",2
"lib1","SARS-CoV-2","GCGTACATTATTGAAA",4,25.6,10.87,0.11,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGTACCACAAGAGAA",3,33.61,9.41,-1.35,0.19,1.5,1.06,0.02,">1 nonsynonymous","V65E P149L",2
"lib1","SARS-CoV-2","GCGTACCACAATACAA",1,21.23,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","G51D P96T N107V K132L Y143F",5
"lib1","SARS-CoV-2","GCGTACCACAGTTTAC",3,55.71,9.03,-1.73,0.08,2.73,1.17,0,">1 nonsynonymous","V32G V115P G146T",3
"lib1","SARS-CoV-2","GCGTACCCCGATATAT",2,63.44,8.43,-2.34,0.16,1.91,1.09,0.01,">1 nonsynonymous","G51E N109H G196M",3
"lib1","SARS-CoV-2","GCGTACCGAGCTCAGG",2,63.47,9.18,-1.59,0.09,2.81,1.1,0,">1 nonsynonymous","T85N L125Y",2
"lib1","SARS-CoV-2","GCGTACCTATCATCCA",3,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S Y91L L131D",3
"lib1","SARS-CoV-2","GCGTACGAACAAATCA",2,40.94,6.13,-4.63,0.6,1.5,1.16,0.01,">1 nonsynonymous","T55S P96F F134R",3
"lib1","SARS-CoV-2","GCGTACGACACCATGA",4,46.09,10.23,-0.54,0.08,2.75,1.06,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","GCGTACTAACCTTCTA",8,100.66,10.52,-0.24,0.05,2.89,1,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","GCGTACTAGACAATAG",3,74.13,10.3,-0.47,0.04,2.79,1.04,0,">1 nonsynonymous","Y35A T55P",2
"lib1","SARS-CoV-2","GCGTACTAGGAAAAGT",3,24.29,10.63,-0.13,0.11,2.79,1.06,0,">1 nonsynonymous","N64R G155S",2
"lib1","SARS-CoV-2","GCGTACTAGTCCAAAA",2,8.21,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S69V G116W S139F G152H N171Y A190P",6
"lib1","SARS-CoV-2","GCGTACTGGTCAAGTG",1,28.42,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","I88N R127P F160W",3
"lib1","SARS-CoV-2","GCGTAGAAAACACGAT",3,5.93,10.82,0.05,0.3,2.88,1,0.01,">1 nonsynonymous","G83R L125Q",2
"lib1","SARS-CoV-2","GCGTAGAAATAACGAT",3,169.84,10.7,-0.07,0.03,2.93,1.03,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","GCGTAGATATTGAAGT",4,76.42,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S43H D68K",2
"lib1","SARS-CoV-2","GCGTAGATTGATTCCA",10,99.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T85W A105M R127M Y165L",4
"lib1","SARS-CoV-2","GCGTAGCCAAGATCTT",2,18.45,10.92,0.15,0.12,2.88,1.03,0,">1 nonsynonymous","T63S K128E",2
"lib1","SARS-CoV-2","GCGTAGCCCTAAGAAT",3,37.45,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I80A T140P",2
"lib1","SARS-CoV-2","GCGTAGCTACATAATC",5,143.42,10.19,-0.57,0.06,2.81,1,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","GCGTAGTAACCTACAT",11,57.17,6.49,-4.28,0.43,1.5,1.19,0.02,">1 nonsynonymous","G74S P161S",2
"lib1","SARS-CoV-2","GCGTAGTATCATACAT",3,25.82,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G9P V20E G86E W106F I142F V173Y",6
"lib1","SARS-CoV-2","GCGTAGTTCCAGTGAA",1,44.75,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A33G T85P F167T",3
"lib1","SARS-CoV-2","GCGTAGTTGGCACGTT",3,41.58,9.99,-0.78,0.09,2.17,1,0.01,"1 nonsynonymous","F17S",1
"lib1","SARS-CoV-2","GCGTATAAATAGTTCA",1,15.88,8.59,-2.17,0.21,2.65,1.07,0.01,">1 nonsynonymous","D90T N157S",2
"lib1","SARS-CoV-2","GCGTATACAGTCAAAT",5,2.16,NA,NA,NA,NA,NA,NA,"stop","A22T V37A Y50*",3
"lib1","SARS-CoV-2","GCGTATACCCTAATTG",4,16.33,6.01,-4.75,1.01,1.5,1.06,0.02,">1 nonsynonymous","V11S F44S G51F K199T",4
"lib1","SARS-CoV-2","GCGTATACGAGTCCAT",2,9.55,6.05,-4.71,1.51,1.5,1.16,0.04,">1 nonsynonymous","S45R N64H A89L N151M",4
"lib1","SARS-CoV-2","GCGTATATACGCCAAG",2,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S I72L",2
"lib1","SARS-CoV-2","GCGTATTAGAACAAAC",11,2.96,NA,NA,NA,NA,NA,NA,"stop","F8L V37* F62R",3
"lib1","SARS-CoV-2","GCGTATTAGCAGTCAT",4,53.85,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","L5I F99K N107R E141K",4
"lib1","SARS-CoV-2","GCGTATTCCATGCAAA",5,129.14,10.77,0.01,0.07,2.77,1.05,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","GCGTATTTGTGATCTT",1,6.07,7.23,-3.54,0.65,1.5,1.18,0.06,">1 nonsynonymous","G116R F167L",2
"lib1","SARS-CoV-2","GCGTCAAAACATCAAT",3,52.58,7.04,-3.72,0.34,1.5,1.04,0.04,">1 nonsynonymous","G101V G155P P197V",3
"lib1","SARS-CoV-2","GCGTCAATCCGCATCA",1,5.97,6.28,-4.49,0.36,3,1.03,0,">1 nonsynonymous","S41V Y93S",2
"lib1","SARS-CoV-2","GCGTCACCACTTCCTA",2,16.84,8.26,-2.5,0.19,1.82,1.08,0.01,">1 nonsynonymous","S36W N107L",2
"lib1","SARS-CoV-2","GCGTCACCTTATATGT",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L T63S",2
"lib1","SARS-CoV-2","GCGTCAGGATTTACTA",1,10.95,10.38,-0.39,0.13,2.89,1,0.01,">1 nonsynonymous","T3Q G83T K199Q",3
"lib1","SARS-CoV-2","GCGTCATCGAAAAGGT",3,15.11,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S36P G51W N107K E141G",4
"lib1","SARS-CoV-2","GCGTCATTCATATAAT",8,4.58,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib1","SARS-CoV-2","GCGTCATTCTGACACG",3,81.62,6,-4.76,1.07,1.5,1.14,0.01,">1 nonsynonymous","D68R A105F S113D R127V",4
"lib1","SARS-CoV-2","GCGTCCAACATCTTCT",1,28.49,10.74,-0.02,0.04,2.89,1.02,0,">1 nonsynonymous","N4K N64I",2
"lib1","SARS-CoV-2","GCGTCCCAATTTAGAC",2,82.43,10.66,-0.1,0.04,2.92,1.02,0,"1 nonsynonymous","N151E",1
"lib1","SARS-CoV-2","GCGTCCGCACCAAGCT",2,24.49,6,-4.76,2,1.5,1.37,0.08,">1 nonsynonymous","P82Q I138K",2
"lib1","SARS-CoV-2","GCGTCCTCTAACACGA",4,40.5,9.57,-1.2,0.09,2.75,1.02,0,">1 nonsynonymous","C6M S43N K114S L122V",4
"lib1","SARS-CoV-2","GCGTCCTCTTAGATAA",4,66.58,6.22,-4.54,1.14,1.5,1.19,0.04,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","GCGTCGCGCTCAAGCT",4,22,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","E10L L95Y",2
"lib1","SARS-CoV-2","GCGTCGTTGATCCATG",5,30.91,6,-4.76,0.96,3,1.17,0.01,">1 nonsynonymous","S41P Y91K F167K",3
"lib1","SARS-CoV-2","GCGTCTAACACAAAGT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","T3M C102M K114I Q144* F156M P197E",6
"lib1","SARS-CoV-2","GCGTCTAACTACTTTA",2,26.75,8.93,-1.83,0.11,1.95,1.07,0.01,">1 nonsynonymous","G9E C31L Y178I",3
"lib1","SARS-CoV-2","GCGTCTAACTAGAGAA",2,44.41,10.8,0.04,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCGTCTATGGATTTGA",4,42.98,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K26Q S36M I72K D97I",4
"lib1","SARS-CoV-2","GCGTCTCCAAAGTATA",5,34.74,6.01,-4.76,1.24,1.5,1.19,0.03,">1 nonsynonymous","G83S I88Q",2
"lib1","SARS-CoV-2","GCGTCTCTACATACCT",1,23.87,8.55,-2.21,0.11,1.99,1.11,0.01,">1 nonsynonymous","S113P S129R",2
"lib1","SARS-CoV-2","GCGTCTCTTACTGGAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84M",1
"lib1","SARS-CoV-2","GCGTCTGATGTTACTA",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40D D90P",2
"lib1","SARS-CoV-2","GCGTCTTAACTCGCGT",10,131.11,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20R R136I Q176E",3
"lib1","SARS-CoV-2","GCGTCTTACCTTGCAG",3,26.18,8.35,-2.42,0.14,2.85,1.07,0.01,"1 nonsynonymous","Y159N",1
"lib1","SARS-CoV-2","GCGTGAAACACAAACA",6,66.44,10.66,-0.11,0.05,2.92,1.05,0,"1 nonsynonymous","T46F",1
"lib1","SARS-CoV-2","GCGTGAAAGTGCAGCT",3,18.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17Q S41Y C61M N120T E141R",5
"lib1","SARS-CoV-2","GCGTGACCGCAAATAC",3,82.22,10.13,-0.63,0.06,2.67,1,0,">1 nonsynonymous","Y35D S43V",2
"lib1","SARS-CoV-2","GCGTGAGATGGCTAGC",4,53.2,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","F167P",1
"lib1","SARS-CoV-2","GCGTGCAAAGACACCT",4,128.55,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","P177Q",1
"lib1","SARS-CoV-2","GCGTGCCTTAACTAGT",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W D90R E141P E154G F160L",5
"lib1","SARS-CoV-2","GCGTGCGACGGTGCCC",2,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E A33N F47V S139V",4
"lib1","SARS-CoV-2","GCGTGTCACATATAGT",8,151.29,10.79,0.03,0.06,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GCGTTAAAGCACACGT",2,0,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","GCGTTAAGCTAACTGA",1,82.74,6,-4.76,2,2.76,1.11,0,">1 nonsynonymous","S29I C61S A81S N107D P177L",5
"lib1","SARS-CoV-2","GCGTTAAGTAAAACTT",4,39.35,9.79,-0.97,0.15,1.96,1.05,0.01,">1 nonsynonymous","L122F N151M F185P T201N",4
"lib1","SARS-CoV-2","GCGTTAAGTAGCAGTA",9,4.03,NA,NA,NA,NA,NA,NA,"stop","P54R A81V Y121* Q168*",4
"lib1","SARS-CoV-2","GCGTTACAATCAACAT",9,148.32,10.41,-0.35,0.04,2.98,1,0,">1 nonsynonymous","K87A D97A A192T",3
"lib1","SARS-CoV-2","GCGTTACATGACAGCA",7,2.11,NA,NA,NA,NA,NA,NA,"stop","W23* G86W",2
"lib1","SARS-CoV-2","GCGTTACCATAACGTA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","Y39V E76* G117V V153A G172T",5
"lib1","SARS-CoV-2","GCGTTACGACCGGCAG",1,31.81,10.25,-0.51,0.16,2.73,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCGTTACGATTAAATG",4,51.27,8.56,-2.21,0.08,2.48,1.06,0,">1 nonsynonymous","I104W G146V",2
"lib1","SARS-CoV-2","GCGTTAGAATACGTCT",1,16.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T N64L K128L Y143I N157C F167T V173D S184G",8
"lib1","SARS-CoV-2","GCGTTAGCTGGAAACA",1,10.24,9.61,-1.15,0.13,2.41,1.15,0.01,">1 nonsynonymous","L5S Y35L S43M G83D G116T F160G",6
"lib1","SARS-CoV-2","GCGTTAGTAAAATTAC",2,9.64,8.9,-1.86,0.15,2.95,1,0.01,">1 nonsynonymous","K87G D97G Y175H",3
"lib1","SARS-CoV-2","GCGTTATATAATTTGA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","A42* T85H V103Y K114G S139K P161Q",6
"lib1","SARS-CoV-2","GCGTTATCAGGACACG",5,87.84,8.58,-2.18,0.19,1.5,1.15,0.01,">1 nonsynonymous","Y50M N107P F160A",3
"lib1","SARS-CoV-2","GCGTTATGAAAAATTT",1,7.85,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","A42I G86L K94L N118V",4
"lib1","SARS-CoV-2","GCGTTATGCACAGCTA",2,12.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L60R V182S",2
"lib1","SARS-CoV-2","GCGTTATTAAGTAAAG",11,118.23,8.12,-2.65,0.2,1.5,1.15,0.01,"1 nonsynonymous","G86K",1
"lib1","SARS-CoV-2","GCGTTCAAACATAAGT",1,25.91,9.72,-1.04,0.12,2.48,1.03,0.01,">1 nonsynonymous","Y123C E141Y",2
"lib1","SARS-CoV-2","GCGTTCAACAACATGC",1,6.08,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S41N G86R S108Q",3
"lib1","SARS-CoV-2","GCGTTCAACCATACAT",1,10.28,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","C61I W106M S129L E135G P161C A192E",6
"lib1","SARS-CoV-2","GCGTTCACAAGTAATA",6,89.32,9.35,-1.41,0.17,1.74,1.12,0.01,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","GCGTTCACTGTATACA",1,120.17,10.77,0.01,0.06,2.93,1.01,0,">1 nonsynonymous","G83F N130T",2
"lib1","SARS-CoV-2","GCGTTCCGACAATATT",8,162.39,10.36,-0.4,0.04,2.81,1.06,0,">1 nonsynonymous","D98F V173A",2
"lib1","SARS-CoV-2","GCGTTCGCCTACGTAC",1,19.68,8.63,-2.13,0.16,2.64,1.1,0.01,">1 nonsynonymous","N118V G155N",2
"lib1","SARS-CoV-2","GCGTTCGGCAATGTAT",10,139.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19L D68M",2
"lib1","SARS-CoV-2","GCGTTGAACCTTAACT",1,10.96,6.13,-4.63,0.41,3,1.2,0.01,">1 nonsynonymous","A14H N64W C102G G146L",4
"lib1","SARS-CoV-2","GCGTTGAAGTTGTGCC",4,2.73,NA,NA,NA,NA,NA,NA,"stop","A18* F47I G74I P191T T201G",5
"lib1","SARS-CoV-2","GCGTTGAATAAGTGGA",10,37,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S41V K56I T63P K87R G116N S147A V182E",7
"lib1","SARS-CoV-2","GCGTTGAGGTCGACAA",8,78.15,10.75,-0.02,0.05,2.94,1.04,0,">1 nonsynonymous","T63S L122R K128I",3
"lib1","SARS-CoV-2","GCGTTGAGTAATCGCC",1,11.03,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","Y119P S139F T170R",3
"lib1","SARS-CoV-2","GCGTTGATAGTCAAAG",5,58.25,9.92,-0.84,0.07,2.58,1.08,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","GCGTTGCATGAACGCA",6,151.68,10.65,-0.11,0.04,2.9,1.02,0,">1 nonsynonymous","A81S T201K",2
"lib1","SARS-CoV-2","GCGTTGTATATATGAA",1,52.56,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T15N N120S C150S T201D",4
"lib1","SARS-CoV-2","GCGTTTAAAGCCACAA",3,7.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D90N R136L G166L",3
"lib1","SARS-CoV-2","GCGTTTAACTCACATA",1,23.21,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I80R R136T",2
"lib1","SARS-CoV-2","GCGTTTATCACATCAG",9,85.66,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G86L N120D R127P Q144E",4
"lib1","SARS-CoV-2","GCGTTTATTGTTCATG",1,0.64,NA,NA,NA,NA,NA,NA,"stop","C49* A105N",2
"lib1","SARS-CoV-2","GCGTTTCTAAAAGGCC",5,83.31,6.28,-4.48,0.63,1.5,1.13,0.02,">1 nonsynonymous","C61K G86R F156E",3
"lib1","SARS-CoV-2","GCGTTTCTATTGCTAA",1,14.35,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","T3E Y35K T55K K94G",4
"lib1","SARS-CoV-2","GCGTTTGCTAGGGTTT",4,0.68,NA,NA,NA,NA,NA,NA,"stop","R16I D59P T85* E154Q L162A",5
"lib1","SARS-CoV-2","GCGTTTGGCTGGATAT",2,0.69,NA,NA,NA,NA,NA,NA,"stop","A33L T85* N107L",3
"lib1","SARS-CoV-2","GCGTTTGTTCATATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S45M T85* F134L",3
"lib1","SARS-CoV-2","GCGTTTTCTATCTATG",4,12.26,6,-4.76,2,3,1.3,0.02,">1 nonsynonymous","V77K V103P",2
"lib1","SARS-CoV-2","GCGTTTTGCGAGAGCT",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K I28L Q144S",3
"lib1","SARS-CoV-2","GCGTTTTGTACGTTCT",2,70.32,10.71,-0.06,0.05,2.93,1.04,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","GCTAAAAAACGACTGT",4,28.55,6,-4.76,1.59,1.5,1.17,0.02,">1 nonsynonymous","D90H S113E",2
"lib1","SARS-CoV-2","GCTAAAAAGATAGCCA",1,10.63,6.89,-3.88,0.52,1.5,1.06,0.05,">1 nonsynonymous","R25Y N64R N92K N130G T201S",5
"lib1","SARS-CoV-2","GCTAAAAATAGACCGT",4,126.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107G D112S",2
"lib1","SARS-CoV-2","GCTAAAACAATAAGCC",16,256.97,6,-4.76,1.28,1.5,1.18,0.01,">1 nonsynonymous","G51R V71E K94S N107D S129D",5
"lib1","SARS-CoV-2","GCTAAAACATGCTGCA",5,24.5,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","L5F C49E A105F Y121M N151Y",5
"lib1","SARS-CoV-2","GCTAAAACCAATAGGT",2,63.29,9.2,-1.56,0.16,1.5,1.07,0.01,">1 nonsynonymous","F44Q V115K R136N",3
"lib1","SARS-CoV-2","GCTAAAACTAAAGTTC",6,0.51,NA,NA,NA,NA,NA,NA,"stop","I80Q Y119* N151D",3
"lib1","SARS-CoV-2","GCTAAAACTGACCTTT",7,6.45,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","V65M C102D",2
"lib1","SARS-CoV-2","GCTAAAAGGATGCCTC",1,2.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","GCTAAAATAAATAACT",4,224.08,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V11Q T100P R127L S139L",4
"lib1","SARS-CoV-2","GCTAAAATAATAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S53N V77Q T140* H189V",4
"lib1","SARS-CoV-2","GCTAAAATATATATCT",5,27.42,8.82,-1.95,0.1,2.79,1.1,0,">1 nonsynonymous","A18R N157S",2
"lib1","SARS-CoV-2","GCTAAAATATTTACCT",3,78.19,10.48,-0.28,0.06,2.83,1.09,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","GCTAAAATCATCTACA",1,22.47,10.92,0.15,0.1,2.94,1.01,0.01,"1 nonsynonymous","V37K",1
"lib1","SARS-CoV-2","GCTAAAATCTTATTAT",2,18.69,8.81,-1.95,0.12,2.07,1.07,0.01,">1 nonsynonymous","T3M N58A Y91F G117C",4
"lib1","SARS-CoV-2","GCTAAAATTGAATGGA",4,111.45,10.78,0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAAAATTTCAATTA",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101A P191L P197L",3
"lib1","SARS-CoV-2","GCTAAACAACAGAAAA",10,53.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C31T Q84D",2
"lib1","SARS-CoV-2","GCTAAACAAGTCGTTA",4,46.81,7.96,-2.8,0.28,1.5,1.09,0.03,">1 nonsynonymous","L5M G86R",2
"lib1","SARS-CoV-2","GCTAAACAATCCAAAC",16,2.86,NA,NA,NA,NA,NA,NA,"stop","C6I R25N K87I C102* G172*",5
"lib1","SARS-CoV-2","GCTAAACACGCCTGTC",1,0.76,NA,NA,NA,NA,NA,NA,"stop","W23K K56V F62* P96E N157D",5
"lib1","SARS-CoV-2","GCTAAACAGTTAAGAC",2,21.34,10.66,-0.11,0.11,2.73,1.18,0.01,">1 nonsynonymous","I2E V37D N110G",3
"lib1","SARS-CoV-2","GCTAAACCCATATCAG",1,54.07,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D112A C158F",2
"lib1","SARS-CoV-2","GCTAAACCCGAAAATT",2,37.65,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T3E E10T S36P R73G V115G",5
"lib1","SARS-CoV-2","GCTAAACGAACTTAAT",3,16.35,10.37,-0.4,0.16,2.75,1.13,0.01,">1 nonsynonymous","T15L V65W W106E P149C",4
"lib1","SARS-CoV-2","GCTAAACGAAGAAGCA",1,54.92,10.33,-0.43,0.04,2.92,1,0,"1 nonsynonymous","A14V",1
"lib1","SARS-CoV-2","GCTAAACGTAATCAGT",2,5.31,6.3,-4.47,1.6,3,1.15,0.01,">1 nonsynonymous","K26P K94Q Y121M C150M",4
"lib1","SARS-CoV-2","GCTAAACTAGCAAACT",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K G155S",2
"lib1","SARS-CoV-2","GCTAAACTAGTGGCAA",4,63.95,10.68,-0.09,0.07,2.86,1.1,0,">1 nonsynonymous","L5V V37N",2
"lib1","SARS-CoV-2","GCTAAACTCGCACACG",8,56.03,10.63,-0.14,0.1,2.95,1.04,0,">1 nonsynonymous","N120S S129N T201M",3
"lib1","SARS-CoV-2","GCTAAACTCTTTTGCT",8,71.67,8.83,-1.94,0.2,1.5,1,0.02,">1 nonsynonymous","V20M N120E",2
"lib1","SARS-CoV-2","GCTAAACTTATATAAA",6,34.15,8.01,-2.76,0.29,1.5,1.2,0.03,">1 nonsynonymous","S41T Y50A V153H",3
"lib1","SARS-CoV-2","GCTAAACTTCACGGTC",2,76.09,10.73,-0.03,0.04,2.95,1.03,0,"1 nonsynonymous","L188M",1
"lib1","SARS-CoV-2","GCTAAAGTCCGATAGA",6,77.88,6.22,-4.55,0.47,1.5,1.13,0.01,">1 nonsynonymous","V20S S41V T55P P169L",4
"lib1","SARS-CoV-2","GCTAAAGTTAAAAACA",8,56.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7N F62L W106A L162S",4
"lib1","SARS-CoV-2","GCTAAAGTTTTATTTC",2,47.61,10.19,-0.57,0.09,2.19,1,0,">1 nonsynonymous","S41T G51V S200D",3
"lib1","SARS-CoV-2","GCTAAATACATACTCA",1,5.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V T100A V173L F185Q",4
"lib1","SARS-CoV-2","GCTAAATACCCAATAG",2,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22P A105R A192T",3
"lib1","SARS-CoV-2","GCTAAATACCGTGACC",18,415.01,10.79,0.03,0.07,2.87,1.07,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","GCTAAATACCGTGGTT",6,58.74,10.39,-0.38,0.07,2.96,1,0,">1 nonsynonymous","N58K R78L K198R",3
"lib1","SARS-CoV-2","GCTAAATAGTATACTG",11,56.56,6.06,-4.7,1.01,1.5,1.21,0.02,">1 nonsynonymous","C6L D59M A105V F160Y",4
"lib1","SARS-CoV-2","GCTAAATCATCTGCAA",3,45.98,6.78,-3.98,0.45,1.5,1.19,0.03,">1 nonsynonymous","T63R A105E",2
"lib1","SARS-CoV-2","GCTAAATGCCAGTTTT",3,39.95,6,-4.76,1.75,1.5,1.21,0.02,">1 nonsynonymous","Q84S L131P",2
"lib1","SARS-CoV-2","GCTAAATTACCAACCC",4,21.44,9.91,-0.85,0.1,2.19,1.09,0.01,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","GCTAAATTACCACAGT",3,7.61,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13W N40M Q79P F99I I104K Y119W",6
"lib1","SARS-CoV-2","GCTAAATTATTTTGAA",6,44.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27S F70S D97R",3
"lib1","SARS-CoV-2","GCTAAATTCCATCAAT",1,11.12,6.73,-4.04,1.04,1.5,1.13,0.05,">1 nonsynonymous","F12V A22P Y50G V103R D112S L183T",6
"lib1","SARS-CoV-2","GCTAAATTCGTCAAAG",3,69.1,10.67,-0.1,0.08,2.91,1.05,0,"1 nonsynonymous","N151Y",1
"lib1","SARS-CoV-2","GCTAAATTGATAGGCC",1,80.64,10.81,0.04,0.04,2.91,1.03,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GCTAACAAAAAAATAA",13,235.25,10.63,-0.13,0.03,2.94,1.01,0,">1 nonsynonymous","H189V G196W T201I",3
"lib1","SARS-CoV-2","GCTAACAAAGAAGCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","K56C Y93* N171I",3
"lib1","SARS-CoV-2","GCTAACACAGTTTGGC",3,82.55,6.7,-4.06,0.23,1.6,1.16,0.01,">1 nonsynonymous","K87N F156Q Q176E",3
"lib1","SARS-CoV-2","GCTAACACCCCATTCC",4,27.46,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","Y35M N58F P82S N92L",4
"lib1","SARS-CoV-2","GCTAACACCTACTGCA",6,114.2,8.87,-1.89,0.15,1.99,1.18,0.01,">1 nonsynonymous","T15S Q176H E186A",3
"lib1","SARS-CoV-2","GCTAACACCTTACTCA",20,270.38,10.06,-0.71,0.06,2.3,1.04,0,"1 nonsynonymous","Y178R",1
"lib1","SARS-CoV-2","GCTAACACGAACAACA",2,15.45,10.45,-0.32,0.15,2.73,1.06,0.01,">1 nonsynonymous","L60P C195F",2
"lib1","SARS-CoV-2","GCTAACAGATGACAAA",8,145.47,10.83,0.07,0.06,2.92,1.03,0,">1 nonsynonymous","I2R P149N",2
"lib1","SARS-CoV-2","GCTAACATAGAAATTG",4,14.01,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10Q V20R K56A V65Y T100D",5
"lib1","SARS-CoV-2","GCTAACATATAAAGAT",4,86.53,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S113L Q176L",2
"lib1","SARS-CoV-2","GCTAACCAATTCCGGG",10,2.58,NA,NA,NA,NA,NA,NA,"stop","C31* K128* G155C",3
"lib1","SARS-CoV-2","GCTAACCATACATCAC",4,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H N118S F156C L183G",4
"lib1","SARS-CoV-2","GCTAACCCAATAATGG",3,23.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","D90P D97W N107D",3
"lib1","SARS-CoV-2","GCTAACCCCGTGATTC",1,13.03,8.29,-2.47,0.35,1.87,1.26,0.07,">1 nonsynonymous","G74M I138L Q144M",3
"lib1","SARS-CoV-2","GCTAACCGTTCCAGCC",1,19.15,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","W106L P149H T170R K198L",4
"lib1","SARS-CoV-2","GCTAACCTAACGAACA",2,41.26,9.77,-1,0.08,2.45,1.03,0,">1 nonsynonymous","A33K G152T",2
"lib1","SARS-CoV-2","GCTAACGGCCCAAGAT",5,31.37,9.83,-0.94,0.14,1.92,1.1,0.01,">1 nonsynonymous","E10A I28F V77S",3
"lib1","SARS-CoV-2","GCTAACTAATATATGA",4,30.25,10.18,-0.58,0.14,1.66,1,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","GCTAACTTTTAAAAAC",2,5.71,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L95N K128A",2
"lib1","SARS-CoV-2","GCTAAGAAATAACGTA",3,25.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3V Y35R S43R V52Q Y143L",5
"lib1","SARS-CoV-2","GCTAAGAACAGTATCT",3,0.39,NA,NA,NA,NA,NA,NA,"stop","C61* P96S K132S T148N",4
"lib1","SARS-CoV-2","GCTAAGAACCAAGGAC",4,37.82,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9P A14H A42V F99I G117Q R127L C158L",7
"lib1","SARS-CoV-2","GCTAAGAAGATTTCAA",4,39.6,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N92L D98N G166S",3
"lib1","SARS-CoV-2","GCTAAGAAGGGTGTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A F126T P161I G172V R179G",5
"lib1","SARS-CoV-2","GCTAAGACGCTTCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P54M K94* I104S N118A E141T",5
"lib1","SARS-CoV-2","GCTAAGAGCTATCAAA",16,222.21,10.77,0,0.06,2.92,1.06,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","GCTAAGATGGGGCATT",1,61.15,10.78,0.01,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAAGATTCAAAGAT",2,11.1,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","I2S F17T W23A I104M",4
"lib1","SARS-CoV-2","GCTAAGATTTTAGTAT",6,101.33,10.16,-0.6,0.06,2.72,1.02,0,">1 nonsynonymous","N4P D90H S129R",3
"lib1","SARS-CoV-2","GCTAAGCAACAACCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S V182S",2
"lib1","SARS-CoV-2","GCTAAGCTAATCCTCA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140S S200N",2
"lib1","SARS-CoV-2","GCTAAGGACACCCTAA",5,50.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Q84W Y91E I138P F156L",4
"lib1","SARS-CoV-2","GCTAAGGCCATCAAAG",5,66.94,10.15,-0.62,0.09,2.65,1,0,"1 nonsynonymous","V77Q",1
"lib1","SARS-CoV-2","GCTAAGTACACAGCAA",5,68.26,6.06,-4.71,1.1,1.5,1.31,0.02,">1 nonsynonymous","E10L S36G I80M K114V",4
"lib1","SARS-CoV-2","GCTAAGTACCCAAAGG",1,17.17,6,-4.76,2,2.23,1.21,0.02,">1 nonsynonymous","S19L S43G S164M",3
"lib1","SARS-CoV-2","GCTAAGTATAAGTGGA",3,51.19,6.05,-4.71,1.06,1.5,1.26,0.02,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","GCTAAGTGACAAATCA",4,121.33,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","C61G Y121N G146E N157Y Y178N",5
"lib1","SARS-CoV-2","GCTAAGTTGAACGTGA",7,3.2,NA,NA,NA,NA,NA,NA,"stop","L57G V77T W106K L131*",4
"lib1","SARS-CoV-2","GCTAATAAAAAATAGA",2,25.35,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A22P F134D T140P",3
"lib1","SARS-CoV-2","GCTAATAAAAAGATTC",2,2.02,NA,NA,NA,NA,NA,NA,"stop","V77* A105L T201A",3
"lib1","SARS-CoV-2","GCTAATAAATTCATTG",10,119.37,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V11N Y35R A81T N107M G146I N151F",6
"lib1","SARS-CoV-2","GCTAATAAGACCAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3Q G9*",2
"lib1","SARS-CoV-2","GCTAATAATTGGATGC",3,77.84,9.81,-0.95,0.12,2.04,1.07,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","GCTAATACGAAAAAAA",8,23.62,6.43,-4.34,0.48,1.5,1.17,0.02,">1 nonsynonymous","S41L N130V V180Y P191S",4
"lib1","SARS-CoV-2","GCTAATACGATGCTCG",6,23.43,9.49,-1.27,0.15,2.13,1.07,0.01,">1 nonsynonymous","S69T Y91S",2
"lib1","SARS-CoV-2","GCTAATACTGAACAAT",3,78.13,10.81,0.05,0.03,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAATACTGAATTTG",1,156.57,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P54A S129C Q163W Q176V K198S",5
"lib1","SARS-CoV-2","GCTAATAGAAATAATG",2,50.34,10.72,-0.05,0.06,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GCTAATAGGACAAAGT",2,32.29,10.69,-0.07,0.07,2.74,1.19,0,"1 nonsynonymous","N24T",1
"lib1","SARS-CoV-2","GCTAATATTCTTGAAT",5,99.77,7.22,-3.54,0.38,1.5,1.17,0.03,">1 nonsynonymous","I2T F12P G174R",3
"lib1","SARS-CoV-2","GCTAATCAACCGATAT",3,70.36,10.82,0.05,0.07,2.84,1.08,0,">1 nonsynonymous","F8W F44W",2
"lib1","SARS-CoV-2","GCTAATCATCACTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N130*",1
"lib1","SARS-CoV-2","GCTAATCGCCAGATAA",9,177.1,10.77,0,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAATGAAGTAAATT",2,19.6,8.69,-2.07,0.27,1.8,1.12,0.03,">1 nonsynonymous","N24E Y35L V77R K94V",4
"lib1","SARS-CoV-2","GCTAATGGTCTTACCC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T63S Q79* D97* Y165M",4
"lib1","SARS-CoV-2","GCTAATGTACAATATA",2,72.71,10.33,-0.44,0.04,2.9,1.02,0,">1 nonsynonymous","N13H E141D N151F T201M",4
"lib1","SARS-CoV-2","GCTAATGTGACCAATT",3,16.11,8.26,-2.51,0.33,1.5,1.3,0.06,">1 nonsynonymous","G9D K26L L38Q S45H T201V",5
"lib1","SARS-CoV-2","GCTAATGTGTCCCGCT",2,45.95,10.34,-0.43,0.09,2.73,1.05,0,">1 nonsynonymous","Y66Q L122R P133S",3
"lib1","SARS-CoV-2","GCTAATTAGAACATTA",5,55.51,8.71,-2.05,0.1,2.7,1.09,0,">1 nonsynonymous","L60V N157T",2
"lib1","SARS-CoV-2","GCTAATTCCGGATCGC",2,32.22,9.65,-1.12,0.17,1.93,1.12,0.01,">1 nonsynonymous","F12I S19E",2
"lib1","SARS-CoV-2","GCTAATTCGTAAAATA",5,41.75,7.93,-2.83,0.45,1.5,1.03,0.07,">1 nonsynonymous","R27A V103M Y119A",3
"lib1","SARS-CoV-2","GCTAATTGCTACTGGT",1,47.31,9.99,-0.77,0.05,2.88,1.02,0,">1 nonsynonymous","T85M L125S K132T T201I",4
"lib1","SARS-CoV-2","GCTAATTGTGTAACTA",6,43.81,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","F44D P96H N107S D137W",4
"lib1","SARS-CoV-2","GCTAATTTAGTCCGCG",13,245.71,10.79,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAATTTCTAAAGTG",3,77.14,10.71,-0.05,0.08,2.87,1.1,0,">1 nonsynonymous","K56Q L122G",2
"lib1","SARS-CoV-2","GCTACAAAGGAATCCA",4,71.74,9.54,-1.22,0.1,1.96,1.1,0,">1 nonsynonymous","V32P D90T",2
"lib1","SARS-CoV-2","GCTACAAATAAAAACT",3,45.23,10.44,-0.32,0.05,2.96,1,0,"1 nonsynonymous","E154D",1
"lib1","SARS-CoV-2","GCTACAAATGGCACAA",4,34.56,9.32,-1.44,0.13,2.05,1.14,0.01,">1 nonsynonymous","F17S I142Y A190G",3
"lib1","SARS-CoV-2","GCTACAAGACCATATA",5,39.44,9.7,-1.06,0.08,2.76,1.08,0,">1 nonsynonymous","I2P T170P",2
"lib1","SARS-CoV-2","GCTACAATACCGTGAA",3,182.37,10.14,-0.63,0.05,2.86,1.02,0,"1 nonsynonymous","I142A",1
"lib1","SARS-CoV-2","GCTACAATACGAGCTA",1,86.59,10.6,-0.17,0.04,2.85,1.06,0,">1 nonsynonymous","T55V N120R N151K A190L",4
"lib1","SARS-CoV-2","GCTACAATCAGACTGC",7,40.02,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","K87C Y93K T201R",3
"lib1","SARS-CoV-2","GCTACAATCTAATAGT",3,16.31,8.22,-2.54,0.17,2.64,1.1,0.01,">1 nonsynonymous","P7L G146K",2
"lib1","SARS-CoV-2","GCTACACATATTTTGT",9,86.59,9.71,-1.05,0.1,1.87,1.1,0,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","GCTACACTATAACACT",7,131.79,9.67,-1.09,0.09,1.93,1.07,0,">1 nonsynonymous","V11G P54A",2
"lib1","SARS-CoV-2","GCTACACTCACTATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","A81* G101S",2
"lib1","SARS-CoV-2","GCTACACTGCTACCCT",1,11.56,10.85,0.08,0.08,2.94,1.03,0,">1 nonsynonymous","N64F T100V T201P",3
"lib1","SARS-CoV-2","GCTACACTTAATGAAC",4,59.15,10.7,-0.07,0.05,2.95,1.02,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","GCTACAGAATTCCATA",1,295.78,10.83,0.07,0.08,2.91,1.06,0,">1 nonsynonymous","T55F E141Q S147N P197Q",4
"lib1","SARS-CoV-2","GCTACAGACTGTCATA",2,44.05,10.74,-0.03,0.08,2.92,1.03,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","GCTACATAGGTCTGGA",3,16.61,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N4I Y35S S139I",3
"lib1","SARS-CoV-2","GCTACATGATAGCTTG",4,74.18,10.78,0.01,0.05,2.88,1.09,0,"1 nonsynonymous","K198G",1
"lib1","SARS-CoV-2","GCTACATGGAATACAC",2,4.21,NA,NA,NA,NA,NA,NA,"stop","C49L F70I Y123*",3
"lib1","SARS-CoV-2","GCTACATTCACTGTTA",3,83.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24Y L38N A67L P82F D90N K114L R124S",7
"lib1","SARS-CoV-2","GCTACATTCGTATCCT",2,23.55,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T148A F167T",2
"lib1","SARS-CoV-2","GCTACCAAAGGTAGAG",4,19.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C49H P96I",2
"lib1","SARS-CoV-2","GCTACCAAATAAAACA",3,1,NA,NA,NA,NA,NA,NA,"stop","Y93P Q168*",2
"lib1","SARS-CoV-2","GCTACCAACCTATTTA",8,23.33,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R16V G86N S113P R127L Q144R T170S",6
"lib1","SARS-CoV-2","GCTACCAATCAAGGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L Q79L L95N S184C",4
"lib1","SARS-CoV-2","GCTACCACGGAGACAG",8,12.05,8.63,-2.14,0.42,1.5,1,0.07,">1 nonsynonymous","P7G N13R A89F I104L",4
"lib1","SARS-CoV-2","GCTACCACTTCCTAAG",1,15.62,10.9,0.14,0.08,2.96,1,0,">1 nonsynonymous","T55N T140L N171V",3
"lib1","SARS-CoV-2","GCTACCAGCGATAAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","T15* G116T Y143R",3
"lib1","SARS-CoV-2","GCTACCAGTGGTCTCG",2,0.42,NA,NA,NA,NA,NA,NA,"stop","F12N R27M S43V L60* L162E G174D V180K",7
"lib1","SARS-CoV-2","GCTACCATCACCGCGG",3,26.53,10.77,0,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTACCCAAAAGTTCC",4,97.99,10.8,0.03,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTACCCACATAATAG",3,43.8,9.76,-1,0.16,1.92,1.05,0.01,">1 nonsynonymous","E10L A105V",2
"lib1","SARS-CoV-2","GCTACCCCAGAACAAA",2,22.84,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I28E F47S D98N G146S P161Q",5
"lib1","SARS-CoV-2","GCTACCCGTTAAGACG",2,49.92,9.15,-1.61,0.14,1.87,1.11,0.01,">1 nonsynonymous","F44V G51S I142M F156R",4
"lib1","SARS-CoV-2","GCTACCGATTGCATTA",6,37.14,10.81,0.04,0.07,2.91,1.02,0,">1 nonsynonymous","N40R T140A",2
"lib1","SARS-CoV-2","GCTACCGATTTTCTCA",10,171.99,9.79,-0.98,0.05,2.9,1.06,0,">1 nonsynonymous","V32L C61I Y175H A192T",4
"lib1","SARS-CoV-2","GCTACCGCGCGTACAG",2,33.37,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y35E F47G G116V P161L",4
"lib1","SARS-CoV-2","GCTACCGGTCGAAGCG",5,142.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6V D97K G172M",3
"lib1","SARS-CoV-2","GCTACCTTAATTGCGC",3,71.87,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R16L D34R T85L L122P P177M",5
"lib1","SARS-CoV-2","GCTACCTTGCCTCAAT",12,53.92,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A22P G86Y P96Y S200P",4
"lib1","SARS-CoV-2","GCTACCTTTAAACTCA",6,49.07,6.45,-4.31,0.35,1.5,1.12,0.01,">1 nonsynonymous","K26L L60E P161T C195F",4
"lib1","SARS-CoV-2","GCTACGAAAGCTGCAG",1,10.02,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V20E S36Y",2
"lib1","SARS-CoV-2","GCTACGAAATCATCAG",19,133.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14S Q84F K94V P133S",4
"lib1","SARS-CoV-2","GCTACGAACAAGCCGA",8,55.05,7.09,-3.67,0.48,1.5,1.29,0.04,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","GCTACGAAGAACCTCT",23,639.62,10.37,-0.4,0.03,2.85,1.01,0,"1 nonsynonymous","I104T",1
"lib1","SARS-CoV-2","GCTACGACAGAGGTAT",3,42.32,8.72,-2.04,0.19,1.5,1.17,0.01,">1 nonsynonymous","I2D F44L Q84V Y93F",4
"lib1","SARS-CoV-2","GCTACGCAACGTTCGA",2,16.28,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","L38V L60F V103I S113P N118S",5
"lib1","SARS-CoV-2","GCTACGCTGTACTTAG",2,9.43,7.32,-3.44,0.38,1.5,1.29,0.04,">1 nonsynonymous","D59E I104N F134W",3
"lib1","SARS-CoV-2","GCTACGGGAGCAATTA",3,21.19,10.07,-0.7,0.11,2.31,1.03,0.01,">1 nonsynonymous","N30T G83A",2
"lib1","SARS-CoV-2","GCTACGTATCACGAAA",6,85.39,10.02,-0.74,0.06,2.25,1,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","GCTACGTATGCATCAA",3,0.04,NA,NA,NA,NA,NA,NA,"stop","F17D A105M L125*",3
"lib1","SARS-CoV-2","GCTACGTTAAAAGCCT",4,13.27,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R27K C49M K94Q F156S",4
"lib1","SARS-CoV-2","GCTACTAAAACAGGAG",2,24.47,8.98,-1.79,0.16,1.5,1.07,0.02,">1 nonsynonymous","Y21L E141D G152R",3
"lib1","SARS-CoV-2","GCTACTAACATCAAAC",10,3.49,NA,NA,NA,NA,NA,NA,"stop","Y159* Y165T",2
"lib1","SARS-CoV-2","GCTACTAAGACATAGC",6,15.97,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","V77K E141I Q163H",3
"lib1","SARS-CoV-2","GCTACTAATAAACCAA",5,207.67,10.58,-0.18,0.05,2.91,1.01,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","GCTACTACCAATAATT",3,20.97,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V182L H189L",2
"lib1","SARS-CoV-2","GCTACTACTTAAGTCC",3,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T85D L95G K114A E186V",5
"lib1","SARS-CoV-2","GCTACTAGTAACCCAC",6,36.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y91S T148L C158F",3
"lib1","SARS-CoV-2","GCTACTATAATAATAT",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11M F62Y P82T G86I D90L G152H",6
"lib1","SARS-CoV-2","GCTACTATCACCTAAC",4,58.54,10.19,-0.58,0.07,2.39,1.02,0,"1 nonsynonymous","A14Y",1
"lib1","SARS-CoV-2","GCTACTCCACCGGTAA",16,87.55,6.01,-4.75,1.03,1.5,1.18,0.02,">1 nonsynonymous","C6L D68N T100A L122M",4
"lib1","SARS-CoV-2","GCTACTCCGCCTATTA",2,14.23,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A22K D59Y G86N P161D",4
"lib1","SARS-CoV-2","GCTACTCGTGAATAAT",3,28.49,9.7,-1.07,0.15,2.02,1,0.01,">1 nonsynonymous","S36G D59S P133L",3
"lib1","SARS-CoV-2","GCTACTCTAACTTCGA",5,9.32,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F8R P82W G172K",3
"lib1","SARS-CoV-2","GCTACTCTTGGTTACA",3,54.88,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F8K V32Y I80E R124S",4
"lib1","SARS-CoV-2","GCTACTGCAAACGCAT",3,46.28,10.25,-0.52,0.08,2.83,1.03,0,">1 nonsynonymous","K114D G152Q",2
"lib1","SARS-CoV-2","GCTACTGTATCGCCTA",1,6.61,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I80V S113F A145S G155N",4
"lib1","SARS-CoV-2","GCTACTGTCAATAAAA",3,31.8,10.24,-0.53,0.08,2.8,1.01,0,"1 nonsynonymous","R136W",1
"lib1","SARS-CoV-2","GCTACTTAACCGAATG",1,9.35,10.32,-0.45,0.09,2.84,1.02,0.01,">1 nonsynonymous","P7L P149I",2
"lib1","SARS-CoV-2","GCTACTTCCCGAATAG",4,66.41,10.75,-0.01,0.09,2.83,1.04,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","GCTACTTCTCTCTCGG",6,344.49,8.48,-2.28,0.13,2.24,1.11,0.01,">1 nonsynonymous","N24R K87P Q176R",3
"lib1","SARS-CoV-2","GCTACTTGAGAACGGA",5,65.51,10.71,-0.06,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTACTTTAGAACGCA",7,18.53,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C6F N24V F99V I104L L122A V181F",6
"lib1","SARS-CoV-2","GCTAGAAAAGAAATCT",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T F160D",2
"lib1","SARS-CoV-2","GCTAGAAAATAAACAA",5,13.54,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y21M S53I V103L G172S",4
"lib1","SARS-CoV-2","GCTAGAACAGTCATTG",4,63.59,10.74,-0.02,0.07,2.85,1.1,0,"1 nonsynonymous","S200L",1
"lib1","SARS-CoV-2","GCTAGAACCTCAATAC",4,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151R V182D",2
"lib1","SARS-CoV-2","GCTAGAATATAACTCT",7,3.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S53M",1
"lib1","SARS-CoV-2","GCTAGACATCTAATGA",13,304.51,10.79,0.03,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTAGACATTTCATCT",7,89.41,8.76,-2,0.15,2.02,1.15,0.01,"1 nonsynonymous","R73V",1
"lib1","SARS-CoV-2","GCTAGACGTAATCGAG",4,86.44,10.08,-0.68,0.04,2.97,1.03,0,">1 nonsynonymous","N151F F156K",2
"lib1","SARS-CoV-2","GCTAGACTACAGGCCA",4,14.65,10.8,0.04,0.12,2.82,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCTAGACTGGGCAGTA",5,45.38,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F12R I80F V173Y",3
"lib1","SARS-CoV-2","GCTAGAGAAATTCACC",2,44,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C6A C31R K94L L131S",4
"lib1","SARS-CoV-2","GCTAGAGACATATTCA",5,40.66,10.61,-0.16,0.08,2.85,1.13,0,">1 nonsynonymous","S45T T140Q T148S",3
"lib1","SARS-CoV-2","GCTAGATAACTTAGGG",5,0.72,NA,NA,NA,NA,NA,NA,"stop","C6Y W106P G117* S129F G152L",5
"lib1","SARS-CoV-2","GCTAGATAATTAAAAT",7,262.89,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","P177Q",1
"lib1","SARS-CoV-2","GCTAGATAGAAGAAAT",2,13.8,6,-4.76,2,3,1.18,0.05,">1 nonsynonymous","L5F F44N Q84L C102G",4
"lib1","SARS-CoV-2","GCTAGATGCCTGATTT",2,67.78,6,-4.76,0.84,1.5,1.11,0.01,">1 nonsynonymous","N40M C158L",2
"lib1","SARS-CoV-2","GCTAGATTCATAAGCC",5,0.66,NA,NA,NA,NA,NA,NA,"stop","S43* S69M P82L F126* F134Y",5
"lib1","SARS-CoV-2","GCTAGCAGTATGCTAT",8,14.12,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","F8E D97H V103T I142T",4
"lib1","SARS-CoV-2","GCTAGCATCTAAACTA",8,165.43,9.36,-1.41,0.1,2.31,1.1,0,">1 nonsynonymous","C6L T100K G174A",3
"lib1","SARS-CoV-2","GCTAGCATTGATAGAC",3,47.3,10.68,-0.08,0.06,2.84,1.08,0,">1 nonsynonymous","F62I S129K",2
"lib1","SARS-CoV-2","GCTAGCATTTCCCGTT",3,54.14,10.71,-0.05,0.07,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GCTAGCCAGTTACAAT",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G155I Q163L G174S",3
"lib1","SARS-CoV-2","GCTAGCCCATTTGAAA",2,129.44,10.57,-0.19,0.02,2.95,1,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","GCTAGCCTAATACCAG",1,36.66,9.18,-1.59,0.17,1.76,1.11,0.01,">1 nonsynonymous","F8G L131V",2
"lib1","SARS-CoV-2","GCTAGCGTTGGGAGAT",2,42.72,6.48,-4.29,0.51,1.5,1.34,0.03,"1 nonsynonymous","D112G",1
"lib1","SARS-CoV-2","GCTAGCGTTTATAAGG",12,105.01,6,-4.76,2,3,1.19,0,">1 nonsynonymous","D90E S113F P133S Q176R G196V",5
"lib1","SARS-CoV-2","GCTAGCTAAACACGCA",4,129.71,10.83,0.06,0.07,2.93,1.03,0,"1 nonsynonymous","S29N",1
"lib1","SARS-CoV-2","GCTAGCTATATATAGT",11,104.56,10.73,-0.03,0.08,2.88,1.07,0,"1 nonsynonymous","V32K",1
"lib1","SARS-CoV-2","GCTAGCTCAAGGCACG",5,29.73,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","P96F N107R F134Y E141D G152F Q168E",6
"lib1","SARS-CoV-2","GCTAGCTCACATACAT",14,151.4,10.75,-0.02,0.05,2.92,1.04,0,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","GCTAGCTCTCTATACC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","S45R G146I K199*",3
"lib1","SARS-CoV-2","GCTAGGACAACCCCGC",5,42.22,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C49D G172W",2
"lib1","SARS-CoV-2","GCTAGGACACTGACAA",4,84.8,10.46,-0.31,0.05,2.86,1.07,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","GCTAGGACGAGTCACC",3,31.28,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","K56C L95P",2
"lib1","SARS-CoV-2","GCTAGGAGCCGCAAAT",4,32.43,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F17P K48Y I88S E135T C150R",5
"lib1","SARS-CoV-2","GCTAGGCCTGAGAGTC",3,42.46,8.3,-2.46,0.13,2.51,1.04,0.01,">1 nonsynonymous","V65L G83S F156L P177A",4
"lib1","SARS-CoV-2","GCTAGGTAATGTAGAT",5,24.82,10.56,-0.2,0.13,2.9,1,0.01,">1 nonsynonymous","L57M D97A",2
"lib1","SARS-CoV-2","GCTAGTAAGATAAAAA",3,38.8,8.52,-2.25,0.27,1.5,1.05,0.03,">1 nonsynonymous","D90I K94L",2
"lib1","SARS-CoV-2","GCTAGTAGTCACTAGA",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R A89Y D97G D112W N118E",5
"lib1","SARS-CoV-2","GCTAGTATCCGTTCCT",3,105.63,8.49,-2.28,0.16,2.12,1.1,0.01,">1 nonsynonymous","C102L Y119F",2
"lib1","SARS-CoV-2","GCTAGTCAAAGATGTT",1,50.08,10.53,-0.24,0.06,2.93,1.05,0,">1 nonsynonymous","N120R K128L",2
"lib1","SARS-CoV-2","GCTAGTCCGACGAATC",3,17.09,6.26,-4.51,0.57,1.5,1.1,0.02,">1 nonsynonymous","I2S S19A S43Q A105R",4
"lib1","SARS-CoV-2","GCTAGTCTAATGTCCT",7,131.66,10.77,0.01,0.08,2.92,1.06,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GCTAGTCTTTACTCGG",6,1.31,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib1","SARS-CoV-2","GCTAGTGAAAAAATGT",1,10.33,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14W Y91V W106D",3
"lib1","SARS-CoV-2","GCTAGTGAGTCCATAA",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V V32G D90H N118T",4
"lib1","SARS-CoV-2","GCTAGTGCTACCAGAC",9,56.05,8.52,-2.24,0.18,1.5,1.17,0.01,">1 nonsynonymous","P133H G155F",2
"lib1","SARS-CoV-2","GCTAGTGCTTAGAACT",5,89.83,10.09,-0.68,0.08,2.61,1.01,0,">1 nonsynonymous","F8V A22R",2
"lib1","SARS-CoV-2","GCTAGTGTGATACGCG",4,0,NA,NA,NA,NA,NA,NA,"stop","C6S V11N D98N F134I G174*",5
"lib1","SARS-CoV-2","GCTAGTGTTACATAAA",6,71.38,6.3,-4.47,0.62,1.5,1.2,0.02,">1 nonsynonymous","K128L C158R",2
"lib1","SARS-CoV-2","GCTAGTTAAATTTGAA",6,29.96,10.05,-0.71,0.08,2.38,1.09,0,">1 nonsynonymous","K26W A42P N64T K128F",4
"lib1","SARS-CoV-2","GCTAGTTAACTTGTAA",2,41.52,10.37,-0.4,0.07,2.84,1.09,0,"1 nonsynonymous","A14I",1
"lib1","SARS-CoV-2","GCTAGTTGCTAAAAGC",1,61.49,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S113V G172T",2
"lib1","SARS-CoV-2","GCTATAAAAGAACTGA",3,2.2,NA,NA,NA,NA,NA,NA,"stop","Y165L K199*",2
"lib1","SARS-CoV-2","GCTATAAACGACTCCT",2,38.29,10.82,0.05,0.08,3,1,0,">1 nonsynonymous","V37M A89T L122S",3
"lib1","SARS-CoV-2","GCTATAAATAACCCGC",1,52.89,10.74,-0.03,0.05,2.98,1,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","GCTATAACACACTCCA",1,20.74,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V37T Q84L F167S",3
"lib1","SARS-CoV-2","GCTATAACATACGCTA",5,74.33,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89F I142Y P149S",3
"lib1","SARS-CoV-2","GCTATAACCACCTGTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y123L",2
"lib1","SARS-CoV-2","GCTATAACTATACTGC",8,83.19,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","N92T P133S S139N",3
"lib1","SARS-CoV-2","GCTATAAGCAACAGTT",7,34.95,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61R I80N L95T F134C Q144Y",5
"lib1","SARS-CoV-2","GCTATAATTATACACT",1,12.8,7.99,-2.77,0.34,1.53,1.04,0.07,">1 nonsynonymous","A14V D137M G146Y",3
"lib1","SARS-CoV-2","GCTATACATTCGATAG",1,7.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I72Q G101F Y159L",3
"lib1","SARS-CoV-2","GCTATACGACCGAGTA",3,60.39,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","Y50R N64C E141V",3
"lib1","SARS-CoV-2","GCTATACGCGAGATGG",20,214.71,8.69,-2.08,0.1,2.86,1.08,0,">1 nonsynonymous","Y119V F156V",2
"lib1","SARS-CoV-2","GCTATACGGTACACGG",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S Y39P D90N V173D",4
"lib1","SARS-CoV-2","GCTATACTAGCCCATT",7,2.72,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","GCTATAGAAATGCATC",9,30.44,10.78,0.01,0.1,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTATAGACAACGTCC",2,144.45,8.99,-1.78,0.06,2.79,1.09,0,">1 nonsynonymous","F44T Y119P",2
"lib1","SARS-CoV-2","GCTATAGATAACCCTC",3,0,NA,NA,NA,NA,NA,NA,"stop","F8* Y119* E141R",3
"lib1","SARS-CoV-2","GCTATAGCTGGAGGAT",5,28.35,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","G9M F44M I88C L95S",4
"lib1","SARS-CoV-2","GCTATAGTACGGGCCG",2,11.86,10.76,-0.01,0.06,3,1,0,">1 nonsynonymous","I2R L38F",2
"lib1","SARS-CoV-2","GCTATAGTCGTTAAAC",7,166.3,10.67,-0.09,0.06,2.87,1.04,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","GCTATATAAATCTAAA",7,101.86,8.15,-2.61,0.14,1.77,1.08,0.01,">1 nonsynonymous","G9K G146L",2
"lib1","SARS-CoV-2","GCTATATAATTTATAC",3,13.42,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49T K94V V103D Y119W Q176M",5
"lib1","SARS-CoV-2","GCTATATCAAATTCCT",3,81.49,10.6,-0.17,0.05,2.9,1.07,0,">1 nonsynonymous","A33F V115R P149R",3
"lib1","SARS-CoV-2","GCTATATCACCCTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8R C49* F70Q D112W T148C F160L",6
"lib1","SARS-CoV-2","GCTATATGTTGGCATA",6,118.59,10.11,-0.66,0.06,2.75,1.03,0,">1 nonsynonymous","C6V K132S",2
"lib1","SARS-CoV-2","GCTATATTCTAGTGCT",3,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S R16I K87D C150S",4
"lib1","SARS-CoV-2","GCTATATTGGCGAATT",2,9.23,6.84,-3.93,0.78,1.5,1.17,0.06,">1 nonsynonymous","R16W C49H S129N E141H",4
"lib1","SARS-CoV-2","GCTATCAACGCACTTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119Q",1
"lib1","SARS-CoV-2","GCTATCAAGTCCTACA",11,10.05,NA,NA,NA,NA,NA,NA,"stop","P96S S200*",2
"lib1","SARS-CoV-2","GCTATCACAGTTTAGA",2,10.78,10.47,-0.3,0.16,2.9,1.08,0.01,">1 nonsynonymous","N1K V37Y",2
"lib1","SARS-CoV-2","GCTATCACATTGGGAG",4,4.33,NA,NA,NA,NA,NA,NA,"stop","T3* G116S N151V F156I",4
"lib1","SARS-CoV-2","GCTATCATAAAAGCTA",1,8.1,10.56,-0.2,0.17,2.8,1,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","GCTATCATTTGGTTCT",3,30.07,10.58,-0.19,0.08,2.93,1.02,0,">1 nonsynonymous","I2D G152C",2
"lib1","SARS-CoV-2","GCTATCCAAATAATTT",4,62.13,10.47,-0.3,0.06,2.86,1,0,">1 nonsynonymous","P7G A42N",2
"lib1","SARS-CoV-2","GCTATCCATATGCCTA",7,135.36,10.25,-0.52,0.05,2.85,1.01,0,">1 nonsynonymous","S41Y G174W",2
"lib1","SARS-CoV-2","GCTATCCCGAGAGCCG",2,37.88,10.93,0.16,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTATCCCTAACAATG",2,71.52,10.26,-0.5,0.06,2.89,1,0,">1 nonsynonymous","P7L K87T E141S",3
"lib1","SARS-CoV-2","GCTATCCGAAATAACC",13,83.57,8.66,-2.1,0.11,1.66,1.1,0,"1 nonsynonymous","G86M",1
"lib1","SARS-CoV-2","GCTATCCGTCTTACGT",3,0.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCTATCCTCTCTAGCA",1,16.9,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","L60V D75K K94E",3
"lib1","SARS-CoV-2","GCTATCCTTCCCCCCA",3,71.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F8M F17C Y50N L60S G152N",5
"lib1","SARS-CoV-2","GCTATCGAGGTACCTC",1,9.66,9.69,-1.08,0.14,2.77,1.04,0.01,">1 nonsynonymous","I142V N157D",2
"lib1","SARS-CoV-2","GCTATCGCTACCAGGG",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29A T55D",2
"lib1","SARS-CoV-2","GCTATCGGGGCAACCT",4,7.19,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N13Y Y35R A89Y",3
"lib1","SARS-CoV-2","GCTATCGTATAACCCT",2,64.67,9.19,-1.57,0.11,2.75,1.15,0,">1 nonsynonymous","R16M R27I Q168L",3
"lib1","SARS-CoV-2","GCTATCGTATGGAGCA",4,73.69,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7L R124K L131D",3
"lib1","SARS-CoV-2","GCTATCTAAAATTGTT",2,24.57,10.69,-0.08,0.08,2.87,1.12,0,"1 nonsynonymous","K26S",1
"lib1","SARS-CoV-2","GCTATCTAATACATAC",5,31.82,6.7,-4.06,0.3,1.5,1.16,0.02,">1 nonsynonymous","I80M A105R",2
"lib1","SARS-CoV-2","GCTATGAATAGTCAAA",6,25,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","K48G L57H V103Q N120L T201Q",5
"lib1","SARS-CoV-2","GCTATGAATTCGGTAA",9,14.88,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","E10A F62Q K94F",3
"lib1","SARS-CoV-2","GCTATGAGACTCAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I80M K94* A105K R136L N151S",5
"lib1","SARS-CoV-2","GCTATGAGATATGCTG",4,5.29,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","I2C L183N",2
"lib1","SARS-CoV-2","GCTATGAGCACACTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G K56N P82V P161R F167T",5
"lib1","SARS-CoV-2","GCTATGATGTGGTAAT",6,22.8,9.18,-1.58,0.14,2.01,1.09,0.01,">1 nonsynonymous","I2V P7S T55W F99H P197S",5
"lib1","SARS-CoV-2","GCTATGCACTTAAGAA",2,61.31,8.57,-2.2,0.13,1.71,1.12,0.01,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","GCTATGCCGCCAGATG",4,24.28,6.47,-4.29,0.68,1.5,1.27,0.04,">1 nonsynonymous","N110V V181Y P197A",3
"lib1","SARS-CoV-2","GCTATGCTAGAGTACA",2,30.69,10.91,0.15,0.08,2.87,1.08,0,">1 nonsynonymous","N40S V153H",2
"lib1","SARS-CoV-2","GCTATGCTAGCGGAAC",1,12.57,6.15,-4.61,0.72,1.5,1.06,0.02,">1 nonsynonymous","W106I G117T C150I S184K",4
"lib1","SARS-CoV-2","GCTATGCTCAGCGCCA",4,19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1E F17L S43L A145M",4
"lib1","SARS-CoV-2","GCTATGGATACCGGCT",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H Y91I",2
"lib1","SARS-CoV-2","GCTATGGTGCACAACA",1,68.98,10.8,0.04,0.07,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTATGGTTATGGATA",5,61.44,9.28,-1.49,0.1,2.44,1.12,0,">1 nonsynonymous","D59S N107D T201G",3
"lib1","SARS-CoV-2","GCTATTAAAATGTGAG",2,90.67,9.38,-1.39,0.08,2.77,1.12,0,">1 nonsynonymous","A105T N157D",2
"lib1","SARS-CoV-2","GCTATTAAAGCTATAA",1,20.15,10.7,-0.07,0.13,2.72,1.08,0.01,">1 nonsynonymous","I2V A33M F160V",3
"lib1","SARS-CoV-2","GCTATTAACGACAACC",3,37.71,6,-4.76,2,3,1.22,0,">1 nonsynonymous","G83D I88K",2
"lib1","SARS-CoV-2","GCTATTAACTGCCATT",9,76.12,6,-4.76,2,3,1.21,0,">1 nonsynonymous","L38P S43A N109H Q144R C158K T170I",6
"lib1","SARS-CoV-2","GCTATTAATATATATT",5,35.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86Q Y119V",2
"lib1","SARS-CoV-2","GCTATTAATCAAGAGC",3,74.76,10.21,-0.55,0.04,2.98,1.03,0,">1 nonsynonymous","V37C F156Y",2
"lib1","SARS-CoV-2","GCTATTACATTTGCTA",6,28.03,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S41T C49P T55S V77W A81E V103K G196E",7
"lib1","SARS-CoV-2","GCTATTACCCGTCATT",1,13.94,9.88,-0.89,0.18,2.16,1.05,0.01,">1 nonsynonymous","G9A Q84D D97I",3
"lib1","SARS-CoV-2","GCTATTACCCTCCTTT",3,20.93,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F8H N58F N157F",3
"lib1","SARS-CoV-2","GCTATTAGCGTTGCCT",2,94.04,6.69,-4.07,0.3,1.5,1.13,0.02,">1 nonsynonymous","K26M Q84R D97L F134D E141M S184F",6
"lib1","SARS-CoV-2","GCTATTAGTTGACTTA",4,14.13,8.18,-2.59,0.26,1.5,1.13,0.02,">1 nonsynonymous","T3R K87G W106I N151G",4
"lib1","SARS-CoV-2","GCTATTCAACTACTCT",1,48.22,10.47,-0.3,0.06,2.89,1.09,0,">1 nonsynonymous","I2S A18R",2
"lib1","SARS-CoV-2","GCTATTCAATATTCTT",1,33.25,10.66,-0.1,0.21,2.48,1.17,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCTATTCCTGGAACCC",6,91.7,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S41E G172F",2
"lib1","SARS-CoV-2","GCTATTTGAAGTACAT",2,8.38,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13D L60H A81L",3
"lib1","SARS-CoV-2","GCTATTTGGATCCAGG",3,5.82,6,-4.76,2,2.2,1.25,0.02,">1 nonsynonymous","N4S D90F D98T N107W F160V",5
"lib1","SARS-CoV-2","GCTATTTGTCATTAAT",5,32.66,6.41,-4.35,0.62,1.5,1.19,0.03,">1 nonsynonymous","N92Y T100N L125R P133S",4
"lib1","SARS-CoV-2","GCTCAAAAAAATCGCA",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R G172N",2
"lib1","SARS-CoV-2","GCTCAAAAATTCTTGA",6,27.67,9.96,-0.8,0.44,1.5,1.01,0.06,">1 nonsynonymous","D34I N107R",2
"lib1","SARS-CoV-2","GCTCAAAACAATAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","P7L C49T N92R Y165*",4
"lib1","SARS-CoV-2","GCTCAAAAGAGTCGCA",2,30.26,7.95,-2.82,0.33,1.5,1.09,0.04,">1 nonsynonymous","T46S A81V N120V Y178V",4
"lib1","SARS-CoV-2","GCTCAAAAGTTTAATT",5,25.91,6,-4.76,1.54,1.5,1.23,0.03,">1 nonsynonymous","R16F I28P E76W G101R R179L",5
"lib1","SARS-CoV-2","GCTCAAAATAATGAAT",4,109.36,10.23,-0.54,0.03,2.92,1.02,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","GCTCAAACCAGGCCGG",6,96.22,9.99,-0.78,0.1,2.35,1.07,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","GCTCAAACTCATTGTG",2,13.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I72M N107V T201Q",3
"lib1","SARS-CoV-2","GCTCAAAGTAAATCCT",2,37.13,10.88,0.12,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCAAAGTTCTAAAT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","N13E Y21M F44G D90T G146*",5
"lib1","SARS-CoV-2","GCTCAAATACTCAAAT",6,113.86,8.24,-2.52,0.14,2.41,1.04,0.01,">1 nonsynonymous","A18G N120Q Y175L",3
"lib1","SARS-CoV-2","GCTCAACACACCGTCT",2,78.58,9.97,-0.79,0.06,2.83,1.04,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","GCTCAACAGAGCTGCC",1,19,6.12,-4.64,1.86,1.5,1.24,0.08,">1 nonsynonymous","G101S I142R",2
"lib1","SARS-CoV-2","GCTCAACATCGACCCC",3,54.78,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D59L D90K D97S R124L P133G R179L",6
"lib1","SARS-CoV-2","GCTCAACCAAGGGCCG",1,10.36,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K56N D90G N120Q F167T",4
"lib1","SARS-CoV-2","GCTCAACCGTTTACCT",4,9.72,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","Y50H D98R V103G",3
"lib1","SARS-CoV-2","GCTCAACGCCTCAGCT",4,0,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","GCTCAAGAAGATATGA",8,1.68,NA,NA,NA,NA,NA,NA,"stop","F8L V37L W106K S113* Y143L F160K G174L T201C",8
"lib1","SARS-CoV-2","GCTCAAGACATAGAAA",2,1.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCTCAAGGTCGATTCT",9,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L N107I S139V",3
"lib1","SARS-CoV-2","GCTCAATAAGGAGTAA",3,12.68,10.18,-0.59,0.31,2.32,1.1,0.01,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","GCTCAATCGAAACCGC",14,175.19,8.69,-2.07,0.09,2.79,1.08,0,">1 nonsynonymous","G146K E154M",2
"lib1","SARS-CoV-2","GCTCAATTCACCAACA",1,9.57,9.55,-1.22,0.28,2.16,1.06,0.03,">1 nonsynonymous","A14H T55I N64T E135S Q168F",5
"lib1","SARS-CoV-2","GCTCAATTTATGGTTG",3,167.13,10.19,-0.58,0.07,2.58,1.04,0,">1 nonsynonymous","P7T G51S",2
"lib1","SARS-CoV-2","GCTCAATTTTGGGGTT",1,3.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","GCTCACAACGCAGGGC",2,42.32,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y35A F167P",2
"lib1","SARS-CoV-2","GCTCACAAGAAAGCCG",2,43.36,10.55,-0.22,0.05,2.93,1.05,0,">1 nonsynonymous","Y39L F44P",2
"lib1","SARS-CoV-2","GCTCACAAGCTAGAAG",11,5.77,NA,NA,NA,NA,NA,NA,"stop","T3W F8R T15S A33P C49L K56* N107* F126A E135V",9
"lib1","SARS-CoV-2","GCTCACACACATATAC",1,75.28,8.48,-2.28,0.17,2.34,1.15,0.01,">1 nonsynonymous","L125C E154V Q176H",3
"lib1","SARS-CoV-2","GCTCACACGATATGTA",4,64.6,10.73,-0.04,0.03,2.96,1.03,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","GCTCACATAAAAAAAA",1,24.58,10.85,0.08,0.06,2.89,1.04,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","GCTCACCCTTGAATCA",3,69.83,8.44,-2.32,0.19,1.91,1.05,0.01,">1 nonsynonymous","N107L P149Q",2
"lib1","SARS-CoV-2","GCTCACCGGGTGGTCG",3,53.03,7.46,-3.31,0.35,1.5,1.25,0.04,">1 nonsynonymous","A105Y Q144L",2
"lib1","SARS-CoV-2","GCTCACCTACCTTTTC",3,34.96,6,-4.76,1.77,1.5,1.24,0.02,">1 nonsynonymous","V11T P54Q N107M T140D",4
"lib1","SARS-CoV-2","GCTCACCTCGCAAGCA",4,0.52,NA,NA,NA,NA,NA,NA,"stop","T3D N92* V153G N171C R179P",5
"lib1","SARS-CoV-2","GCTCACCTGAGGTAGT",6,0.35,NA,NA,NA,NA,NA,NA,"stop","F62G T100* A105* S139N",4
"lib1","SARS-CoV-2","GCTCACGGAATTATGT",1,16.85,9.57,-1.2,0.16,2.26,1.08,0.01,">1 nonsynonymous","R78Q Y123T N151L S200L",4
"lib1","SARS-CoV-2","GCTCACGGGATTTGGT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","N1S R127T Q168*",3
"lib1","SARS-CoV-2","GCTCACTGTTGATTCG",9,3.09,NA,NA,NA,NA,NA,NA,"stop","L38* F62S A81Y I88S Y143S P161H",6
"lib1","SARS-CoV-2","GCTCACTTCAAACTTA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","K87S N130H F134* V173T",4
"lib1","SARS-CoV-2","GCTCAGAACACCCTCT",3,85.66,10.82,0.05,0.09,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCAGAATGTCTTAC",7,63.84,8.39,-2.37,0.17,1.73,1.17,0.01,">1 nonsynonymous","Y121E Q163S",2
"lib1","SARS-CoV-2","GCTCAGAGAAATGAAA",1,17.01,6.08,-4.69,0.94,1.5,1.08,0.02,">1 nonsynonymous","D68G Y91H",2
"lib1","SARS-CoV-2","GCTCAGAGGTAATAGG",4,65.88,9.01,-1.76,0.14,2.38,1.12,0.01,">1 nonsynonymous","N30V T55D Q163E",3
"lib1","SARS-CoV-2","GCTCAGATAGATAGCA",10,168.19,10.79,0.03,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCAGCACAATCAAA",3,18.74,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D34Y R136S P161W",3
"lib1","SARS-CoV-2","GCTCAGCATAAAGCTA",5,17.16,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","R73V W106L",2
"lib1","SARS-CoV-2","GCTCAGCCTAACTATT",1,12.61,6.87,-3.89,0.29,1.5,1.05,0.02,">1 nonsynonymous","F17I P133T A145T",3
"lib1","SARS-CoV-2","GCTCAGCCTTGCCGTT",13,29.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3R K87E V115R L131W",4
"lib1","SARS-CoV-2","GCTCAGCGTAATGGAT",4,135.49,8.74,-2.02,0.08,2.81,1.08,0,">1 nonsynonymous","E10S F126T T148L",3
"lib1","SARS-CoV-2","GCTCAGGACACACTTA",13,301.99,9.93,-0.83,0.16,1.69,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCTCAGGGACAAGCAA",1,33.93,10.17,-0.59,0.05,2.71,1,0,">1 nonsynonymous","T15S A42T A81V T100L",4
"lib1","SARS-CoV-2","GCTCAGGGCCTTCTTC",3,37.97,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P82V F99I G146P",3
"lib1","SARS-CoV-2","GCTCAGGTAATATCCG",1,0.63,NA,NA,NA,NA,NA,NA,"stop","I80* Y178F",2
"lib1","SARS-CoV-2","GCTCAGTCGTCATATG",4,99.04,8.28,-2.49,0.17,2,1.19,0.01,">1 nonsynonymous","D98E Y175V",2
"lib1","SARS-CoV-2","GCTCATAAAGACACAT",5,107.12,10.8,0.03,0.07,2.92,1.06,0,"1 nonsynonymous","K128N",1
"lib1","SARS-CoV-2","GCTCATAATTAACACC",11,48.86,6,-4.76,1.23,1.5,1.16,0.01,">1 nonsynonymous","L60F A81C D112G I142L P197M",5
"lib1","SARS-CoV-2","GCTCATACAAAACCTT",5,44.5,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4Y N40L D68L Y91G T140H",5
"lib1","SARS-CoV-2","GCTCATACAACCAGGC",5,40.97,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","D68V S129R",2
"lib1","SARS-CoV-2","GCTCATACGATGCAGC",18,342.72,10.16,-0.61,0.04,2.78,1.03,0,">1 nonsynonymous","N13M G196R",2
"lib1","SARS-CoV-2","GCTCATATTCATCCGA",2,40.93,10.62,-0.14,0.03,2.99,1,0,">1 nonsynonymous","P149I V153F",2
"lib1","SARS-CoV-2","GCTCATCCAAGCTGCT",2,83.82,8.83,-1.94,0.06,2.86,1.11,0,"1 nonsynonymous","Y175N",1
"lib1","SARS-CoV-2","GCTCATCGGGGACGAA",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A14H A33S T100P D112G N118I C158S",7
"lib1","SARS-CoV-2","GCTCATCTTGAGGACG",6,130.59,10.04,-0.73,0.06,2.62,1.04,0,">1 nonsynonymous","K128I S164L",2
"lib1","SARS-CoV-2","GCTCATGCACACAGGT",1,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A K56S T85S",3
"lib1","SARS-CoV-2","GCTCATGTCATAAGGG",5,22.11,6.49,-4.27,0.33,1.53,1.11,0.01,">1 nonsynonymous","C49M N58S P82W G86T K94G",5
"lib1","SARS-CoV-2","GCTCATTCGAAGGAGT",7,17.09,6,-4.76,2,1.5,1.07,0.04,">1 nonsynonymous","R16Y V103P",2
"lib1","SARS-CoV-2","GCTCATTTTTATAAAA",1,5.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y159C T201D",2
"lib1","SARS-CoV-2","GCTCCAAAAGCCATCA",1,11.31,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Q79R Y91D",2
"lib1","SARS-CoV-2","GCTCCAAACACCTATA",2,1.2,NA,NA,NA,NA,NA,NA,"stop","L60E G116*",2
"lib1","SARS-CoV-2","GCTCCAACAAAGTAAT",13,197.86,10.6,-0.16,0.04,2.91,1.04,0,"1 nonsynonymous","A42I",1
"lib1","SARS-CoV-2","GCTCCAAGGAAAAGAG",5,124.57,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y123T G172R",2
"lib1","SARS-CoV-2","GCTCCAAGGCCCATCT",4,22.45,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D98S A105D T148G",3
"lib1","SARS-CoV-2","GCTCCAATATAAATTA",4,25.86,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S69R D112E S147H P161R",4
"lib1","SARS-CoV-2","GCTCCACATATCTACT",9,48.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y119F V181G",2
"lib1","SARS-CoV-2","GCTCCACTGCTAGAGT",2,29.81,8.38,-2.39,0.3,1.5,1,0.06,">1 nonsynonymous","T63Y N118I R124I T148A Y178H G196N",6
"lib1","SARS-CoV-2","GCTCCAGCCAAAACCC",3,33.07,9.15,-1.62,0.14,1.92,1.09,0.01,">1 nonsynonymous","G9S L162N",2
"lib1","SARS-CoV-2","GCTCCAGTCACCAATC",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T L60Y A67Y G74K G196M",5
"lib1","SARS-CoV-2","GCTCCATACGATGCCG",1,75,10.81,0.04,0.07,2.93,1.06,0,">1 nonsynonymous","K128S T201K",2
"lib1","SARS-CoV-2","GCTCCATCTAGGTATA",10,128.34,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4Q Y21I G86I W106Y G155H P191T",6
"lib1","SARS-CoV-2","GCTCCCAAGATAGAGC",1,9.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14M T100G P133G",3
"lib1","SARS-CoV-2","GCTCCCACATTGGAGA",4,96.31,10.49,-0.27,0.04,2.92,1.01,0,">1 nonsynonymous","N58L S200W",2
"lib1","SARS-CoV-2","GCTCCCAGGGAACATG",2,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P F99R",2
"lib1","SARS-CoV-2","GCTCCCCACAAGACCA",4,26.49,10.61,-0.16,0.06,2.87,1.02,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","GCTCCCCAGTCTTTTA",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q T55G",2
"lib1","SARS-CoV-2","GCTCCCCCTTTGATTA",2,15.26,10.47,-0.29,0.07,2.77,1.13,0,">1 nonsynonymous","G51S S129D",2
"lib1","SARS-CoV-2","GCTCCCCGCAAAAGAC",7,57.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V77N K128C H189N",3
"lib1","SARS-CoV-2","GCTCCCCTCGAGAAGT",1,25.07,10.02,-0.74,0.16,2.15,1.16,0.01,">1 nonsynonymous","V37M E76Y N120R",3
"lib1","SARS-CoV-2","GCTCCCGCGGATACCC",8,113.73,10.24,-0.53,0.07,2.76,1,0,">1 nonsynonymous","G83T E141N",2
"lib1","SARS-CoV-2","GCTCCCGGCTGAATTG",3,35.23,6.99,-3.77,0.29,1.5,1.25,0.02,">1 nonsynonymous","A22S C61N P161D",3
"lib1","SARS-CoV-2","GCTCCCGTATAAAAAA",3,26.09,8.37,-2.4,0.21,2.23,1.12,0.02,">1 nonsynonymous","A81E D98R N120P",3
"lib1","SARS-CoV-2","GCTCCCGTGGAGATAA",1,22.32,10.83,0.06,0.1,2.96,1,0,">1 nonsynonymous","I2F S53I S139T",3
"lib1","SARS-CoV-2","GCTCCCTAAACTTGTC",4,86.05,10.18,-0.58,0.04,2.92,1.02,0,">1 nonsynonymous","K114E A145T",2
"lib1","SARS-CoV-2","GCTCCGAATTTTACTA",4,29.31,7.75,-3.02,0.29,1.5,1.17,0.02,">1 nonsynonymous","A33P F44H T55A E76C",4
"lib1","SARS-CoV-2","GCTCCGACAATCGTAT",2,19.92,9.14,-1.62,0.18,1.65,1.15,0.02,">1 nonsynonymous","T3K C6I G83S E141S",4
"lib1","SARS-CoV-2","GCTCCGACACCATGTT",1,48.17,8.98,-1.79,0.17,1.74,1.11,0.01,">1 nonsynonymous","F12N N151K",2
"lib1","SARS-CoV-2","GCTCCGAGAAGGGTGG",1,6.83,NA,NA,NA,NA,NA,NA,"stop","G9V R78* G116V",3
"lib1","SARS-CoV-2","GCTCCGAGGGTTTACT",3,30.62,8.92,-1.84,0.37,1.5,1.04,0.07,">1 nonsynonymous","K56R N64R G86A K114T",4
"lib1","SARS-CoV-2","GCTCCGCAAACGTTTC",6,82.05,10.84,0.07,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCCGGACTCCATCT",5,101.5,10.7,-0.06,0.06,2.89,1.05,0,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","GCTCCGGCCCCCTCAG",4,0,NA,NA,NA,NA,NA,NA,"stop","S139N F167G G174M P197*",4
"lib1","SARS-CoV-2","GCTCCGGCCGATTGTG",5,30.52,10.89,0.12,0.11,2.92,1.05,0.01,"1 nonsynonymous","P54F",1
"lib1","SARS-CoV-2","GCTCCGTCAAAATATT",1,14.74,9.45,-1.32,0.21,2.63,1.15,0.03,">1 nonsynonymous","R78Y N118T",2
"lib1","SARS-CoV-2","GCTCCGTGCGAAACAT",5,38.7,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","V37E C61F R127D P149T N157Q",5
"lib1","SARS-CoV-2","GCTCCGTTCACCGCCT",6,142.53,7.96,-2.81,0.19,1.53,1.15,0.01,">1 nonsynonymous","A81F Y119W",2
"lib1","SARS-CoV-2","GCTCCTAACCCGTAAA",7,1676.64,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","R27G D97S S113D A145S",4
"lib1","SARS-CoV-2","GCTCCTACCATATAAT",2,38.12,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2S Y66F P96Q L122T P169M",5
"lib1","SARS-CoV-2","GCTCCTCTAACCTTGA",2,86.03,10.1,-0.67,0.08,2.74,1.03,0,">1 nonsynonymous","S53E A81Y",2
"lib1","SARS-CoV-2","GCTCCTGAACTGAGAG",14,163.74,10.71,-0.06,0.06,2.89,1.03,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","GCTCCTGATAACAAAA",8,138.03,10.8,0.04,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCCTGCTCAGAGAA",1,1.45,NA,NA,NA,NA,NA,NA,"stop","A14* D97I",2
"lib1","SARS-CoV-2","GCTCCTGGTCGGAGTG",8,67.64,8.89,-1.88,0.26,1.5,1.13,0.03,">1 nonsynonymous","T15L V37R P96R",3
"lib1","SARS-CoV-2","GCTCCTGTTTACCCGG",1,56.73,10.66,-0.1,0.04,2.87,1.08,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","GCTCCTTATAGCATCA",5,113.59,10.48,-0.29,0.05,2.9,1,0,">1 nonsynonymous","I2H E10I",2
"lib1","SARS-CoV-2","GCTCCTTATCACAGCA",3,30.57,10.36,-0.4,0.06,2.87,1.05,0,">1 nonsynonymous","C61K R127K",2
"lib1","SARS-CoV-2","GCTCCTTCAAATTCTT",4,14.59,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T63R T85C P96T V103I I138C",5
"lib1","SARS-CoV-2","GCTCCTTTAATGGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S A105R L122G K128M S139V",5
"lib1","SARS-CoV-2","GCTCGAAAGTAAGTAA",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T V11S K48L F99L",4
"lib1","SARS-CoV-2","GCTCGAACATGTTGTG",7,0.21,NA,NA,NA,NA,NA,NA,"stop","V32R N64*",2
"lib1","SARS-CoV-2","GCTCGAAGCCTATACC",5,56.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17N C61L K94A P149Q",4
"lib1","SARS-CoV-2","GCTCGACATGAATCCC",4,107.72,9.19,-1.57,0.13,1.81,1.11,0.01,">1 nonsynonymous","K56Q N109W V180M",3
"lib1","SARS-CoV-2","GCTCGACCAGTCATCC",3,68.08,10.74,-0.02,0.08,2.88,1.07,0,"1 nonsynonymous","S53V",1
"lib1","SARS-CoV-2","GCTCGACGTTGCGGTC",10,24.58,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","T15Y G86Y D90W V103S Y178C",5
"lib1","SARS-CoV-2","GCTCGAGATATAAAAA",6,38.5,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G9I D34L K56R A89H D97L V103M",6
"lib1","SARS-CoV-2","GCTCGAGTGATCAAAG",1,41.69,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","V37M C61H G86K Q168V",4
"lib1","SARS-CoV-2","GCTCGAGTGCATGCAT",2,25.85,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T55Y P96Y P161C",3
"lib1","SARS-CoV-2","GCTCGAGTTGACTAGC",6,36.4,7.86,-2.91,0.12,2.29,1.11,0,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","GCTCGATATTTACAAG",1,18.7,10.45,-0.32,0.1,2.94,1.07,0,">1 nonsynonymous","V65L T100H V115L",3
"lib1","SARS-CoV-2","GCTCGATCTCTGCAAT",6,76.83,10.22,-0.55,0.05,2.91,1,0,">1 nonsynonymous","G9V Y39Q C61K K128L",4
"lib1","SARS-CoV-2","GCTCGATGCTTAGGAG",1,13.26,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","K94A R179N",2
"lib1","SARS-CoV-2","GCTCGATTAATGCAAC",10,91.34,10.49,-0.27,0.07,2.87,1.04,0,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","GCTCGCAGACCATGAG",1,21.48,10.51,-0.26,0.07,2.94,1,0,">1 nonsynonymous","L60T E154G",2
"lib1","SARS-CoV-2","GCTCGCCCGTTCCATT",4,63.2,9.81,-0.96,0.09,2.54,1.05,0,">1 nonsynonymous","Q79L K128G Q168R",3
"lib1","SARS-CoV-2","GCTCGCCTCCATGTTT",2,29.96,8.88,-1.88,0.11,2.37,1.13,0,"1 nonsynonymous","Y165L",1
"lib1","SARS-CoV-2","GCTCGCCTTACTAATG",10,49.8,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55M Y93E C150D",3
"lib1","SARS-CoV-2","GCTCGCCTTGCTAGCA",9,48.25,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","E10A L60A G86R Y93V D112G P149T",6
"lib1","SARS-CoV-2","GCTCGGACCTCCCCAT",1,8.88,9.71,-1.05,0.34,1.7,1.16,0.03,">1 nonsynonymous","F8T S41T N64T K128N G196R",5
"lib1","SARS-CoV-2","GCTCGGAGCGTAACTA",1,14.45,9.73,-1.03,0.35,1.5,1.09,0.06,">1 nonsynonymous","V37Y L131Q",2
"lib1","SARS-CoV-2","GCTCGGCAACGTCCCT",5,127.82,10.5,-0.26,0.04,2.95,1.04,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","GCTCGGCAAGGACTCG",5,2.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160R",1
"lib1","SARS-CoV-2","GCTCGGCGAATCTAGT",1,32.75,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y39S T46F E76R T85M G101H G116A I142M",7
"lib1","SARS-CoV-2","GCTCGTAATGAAAAAT",1,13.49,10.36,-0.41,0.13,2.79,1,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","GCTCGTATCAACACTG",10,61.62,9.87,-0.89,0.09,2.22,1.1,0,">1 nonsynonymous","F134K S147Y",2
"lib1","SARS-CoV-2","GCTCGTATGGTTTCAA",5,0.45,NA,NA,NA,NA,NA,NA,"stop","N4* Q84R",2
"lib1","SARS-CoV-2","GCTCGTCCCTGCAACA",4,12.24,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","S41F S53T L60V R78M N107G Y165H",6
"lib1","SARS-CoV-2","GCTCGTGAATACTACG",4,1.87,NA,NA,NA,NA,NA,NA,"stop","V37L P96M A105* D112Y Y121F",5
"lib1","SARS-CoV-2","GCTCGTTAAAAAAACC",11,256.6,9.58,-1.18,0.07,2.61,1.05,0,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","GCTCGTTAAAATTATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87A S184E",2
"lib1","SARS-CoV-2","GCTCTAAATAAGGTTA",5,14.75,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N58V I88R D97F Y123E P133C",5
"lib1","SARS-CoV-2","GCTCTAACGGCTGGGA",3,1.62,NA,NA,NA,NA,NA,NA,"stop","Y35* Y91T D98S P149R H189W T201N",6
"lib1","SARS-CoV-2","GCTCTAACTAATCAGG",10,61.57,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8K F62P V103A",3
"lib1","SARS-CoV-2","GCTCTAATAAAGAGAT",7,113.69,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F8H V37E G51V G86L",4
"lib1","SARS-CoV-2","GCTCTAATGTATATAG",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127L T148I",2
"lib1","SARS-CoV-2","GCTCTAATTAACGCAT",3,22.48,8.43,-2.34,0.28,1.5,1,0.04,"1 nonsynonymous","C49R",1
"lib1","SARS-CoV-2","GCTCTACCGAAGGTAT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G L38R T63L P96Y Y119N",5
"lib1","SARS-CoV-2","GCTCTACGACATTCGG",8,110.37,9.44,-1.32,0.1,2.46,1.17,0,">1 nonsynonymous","G9P N118C S200K",3
"lib1","SARS-CoV-2","GCTCTACTAACAATAG",1,39.5,9.57,-1.19,0.18,1.62,1.16,0.02,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","GCTCTACTATGTAATA",2,8.36,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F12H V37Q G83L I138Q T170K P197G",6
"lib1","SARS-CoV-2","GCTCTAGAATAACCAA",4,66.1,10.69,-0.08,0.08,2.88,1.1,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","GCTCTAGAGTACAGTA",3,43.87,10.7,-0.06,0.06,2.92,1.06,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","GCTCTAGCGGGGGGGA",9,167.01,10.77,0.01,0.08,2.94,1.03,0,"1 nonsynonymous","Y39T",1
"lib1","SARS-CoV-2","GCTCTATATGCCAAGG",9,34.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T15D T55H I72P V153D",4
"lib1","SARS-CoV-2","GCTCTATTGTGCCAGG",5,125.44,10.2,-0.57,0.05,2.94,1.02,0,">1 nonsynonymous","G146S F156M",2
"lib1","SARS-CoV-2","GCTCTCAACACTGATT",8,65.39,10.71,-0.05,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCTCAATCACAATT",1,99.16,9.69,-1.07,0.12,2.48,1.05,0.01,">1 nonsynonymous","S41W D97E V103I G116T",4
"lib1","SARS-CoV-2","GCTCTCGACTACCACA",2,155.68,10.16,-0.6,0.05,2.78,1.02,0,"1 nonsynonymous","Y35K",1
"lib1","SARS-CoV-2","GCTCTCGTGCACAGCA",4,20.09,6.81,-3.95,0.66,1.5,1.06,0.07,">1 nonsynonymous","F99I I142G",2
"lib1","SARS-CoV-2","GCTCTCTACTTGCCAG",14,2.54,NA,NA,NA,NA,NA,NA,"stop","N4V R27* S36L A89* V103M G116M",6
"lib1","SARS-CoV-2","GCTCTCTCCTTTAGTC",3,54.74,10.66,-0.11,0.04,2.96,1,0,">1 nonsynonymous","T15S S129C",2
"lib1","SARS-CoV-2","GCTCTCTTTATTGGGC",2,42.14,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R73T K94M D112L N171Q",4
"lib1","SARS-CoV-2","GCTCTGAACCGCAATA",6,8.3,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A42K P96L T100N V115Y S129G P149T",6
"lib1","SARS-CoV-2","GCTCTGACACATGCCC",13,279.7,10.65,-0.12,0.05,2.89,1.07,0,"1 nonsynonymous","S164Y",1
"lib1","SARS-CoV-2","GCTCTGACAGAGATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5T T15* V103M",3
"lib1","SARS-CoV-2","GCTCTGCCCAGCCCAT",3,14,8.38,-2.39,0.28,1.5,1.14,0.04,">1 nonsynonymous","C61M E76Y Q84S",3
"lib1","SARS-CoV-2","GCTCTGCCCGTATAAC",2,29.17,10.68,-0.09,0.07,2.83,1.08,0,">1 nonsynonymous","T55S G174S",2
"lib1","SARS-CoV-2","GCTCTGCGAATATCCA",3,20.86,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S19E N64V C102W K114T S129R",5
"lib1","SARS-CoV-2","GCTCTGCTCATTTGTT",1,2.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","GCTCTGCTTATAAATG",1,37.22,10.74,-0.03,0.08,2.93,1.04,0,"1 nonsynonymous","N64Y",1
"lib1","SARS-CoV-2","GCTCTGGATTAGGCCA",1,25.18,10.11,-0.65,0.05,2.92,1,0,">1 nonsynonymous","T55N Y159W",2
"lib1","SARS-CoV-2","GCTCTGTATGAAATTA",2,44.43,10.75,-0.02,0.04,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTCTGTCCACCATAA",3,69.27,10.86,0.09,0.09,2.9,1.06,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","GCTCTTATACAACAAT",5,51.18,7.34,-3.42,0.39,1.5,1.21,0.05,">1 nonsynonymous","I2Y D98G A105Q",3
"lib1","SARS-CoV-2","GCTCTTATCTACCTTA",2,23.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36V F99L K128L Y178L",4
"lib1","SARS-CoV-2","GCTCTTCACAGTCTAA",6,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R S36E P96T",3
"lib1","SARS-CoV-2","GCTCTTCCCCCAAAAA",4,49.19,10.77,0.01,0.06,2.85,1.12,0,">1 nonsynonymous","L5S L122H",2
"lib1","SARS-CoV-2","GCTCTTGAAATAGAGA",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T46H N107V N157T",4
"lib1","SARS-CoV-2","GCTCTTGATCAACTCT",4,28.47,8.31,-2.46,0.24,1.68,1.18,0.03,">1 nonsynonymous","T15I N107S P149Q",3
"lib1","SARS-CoV-2","GCTCTTGCAAAAACTT",15,149.74,6.51,-4.25,0.52,1.5,1.21,0.03,">1 nonsynonymous","Y35N Y121R T140R",3
"lib1","SARS-CoV-2","GCTCTTGGAGGTGTAA",7,45.61,6.46,-4.3,0.44,1.5,1.14,0.02,">1 nonsynonymous","A22P G51H T201C",3
"lib1","SARS-CoV-2","GCTCTTTATAGAGTAA",2,24.61,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F47S V52L V181D",3
"lib1","SARS-CoV-2","GCTGAAAAAACTATGT",1,52.03,10.83,0.07,0.09,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGAAAAAAGAGTAC",6,53.66,10.27,-0.49,0.06,2.76,1.04,0,">1 nonsynonymous","K56L A105G",2
"lib1","SARS-CoV-2","GCTGAAAAAGATGCAG",5,47.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89D T100H",2
"lib1","SARS-CoV-2","GCTGAAAACCTAGGCA",6,86.41,7.01,-3.75,0.31,1.5,1.12,0.02,">1 nonsynonymous","V11G P96Q N109T Y121A T148S G174K",6
"lib1","SARS-CoV-2","GCTGAAAAGGAGTGGA",8,35.28,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17R F99L L188V",3
"lib1","SARS-CoV-2","GCTGAAAATCACATTT",2,16.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15L Q79H E135R Q144F F167K G174V",6
"lib1","SARS-CoV-2","GCTGAAACACAGCGAG",4,14.31,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","C6R I88W C150S",3
"lib1","SARS-CoV-2","GCTGAAACCAAGACTG",10,49.17,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N13V Y91V N107S Y119D V181I",5
"lib1","SARS-CoV-2","GCTGAAAGACTAATAG",3,22.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Y K56W G86S A192V",4
"lib1","SARS-CoV-2","GCTGAAAGATAAGTAA",3,31.11,10.62,-0.14,0.07,2.82,1.05,0,">1 nonsynonymous","C61R D90R",2
"lib1","SARS-CoV-2","GCTGAAATGACTGCTT",2,18.06,10.17,-0.6,0.08,2.96,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","GCTGAAATTAAGATTA",2,9.42,6,-4.76,2,2.2,1.19,0.01,">1 nonsynonymous","C61W D68Q G83C",3
"lib1","SARS-CoV-2","GCTGAAATTCTTCCGT",4,98.2,9.05,-1.71,0.1,1.71,1.12,0,">1 nonsynonymous","S19D V180L",2
"lib1","SARS-CoV-2","GCTGAACAAAAAAAGG",4,6.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I S45R G83D I88S T140S",5
"lib1","SARS-CoV-2","GCTGAACACATCCTGA",1,67.08,9.12,-1.65,0.14,1.5,1.12,0.01,">1 nonsynonymous","G51D K132L Y178V",3
"lib1","SARS-CoV-2","GCTGAACAGTGACGAG",1,42.24,10.21,-0.55,0.06,2.9,1,0,">1 nonsynonymous","G116S S164F K198M",3
"lib1","SARS-CoV-2","GCTGAACGGATTGTGC",1,36.95,10.78,0.02,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGAACTACAGAGCA",2,26.92,10.77,0.01,0.05,2.99,1,0,"1 nonsynonymous","Y35I",1
"lib1","SARS-CoV-2","GCTGAACTGTCTCCTT",1,1.41,NA,NA,NA,NA,NA,NA,"stop","T55Y C150*",2
"lib1","SARS-CoV-2","GCTGAACTGTTCTCGA",2,7.06,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T3R I80R D90V",3
"lib1","SARS-CoV-2","GCTGAACTTTAGAGAA",11,206.81,10.27,-0.49,0.05,2.81,1.04,0,"1 nonsynonymous","G51A",1
"lib1","SARS-CoV-2","GCTGAAGCAATAAATT",8,44.04,7.01,-3.75,0.27,1.5,1.05,0.02,">1 nonsynonymous","G9V L131E S139T",3
"lib1","SARS-CoV-2","GCTGAAGCCTCGCTGG",8,94.78,10.75,-0.02,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGAAGCGAAGCGAT",8,11.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15Q D68N A105S T148F",4
"lib1","SARS-CoV-2","GCTGAAGTAAATCCCA",4,58.64,10.53,-0.23,0.05,2.87,1.1,0,">1 nonsynonymous","S43V T55Y P149L K199L",4
"lib1","SARS-CoV-2","GCTGAATTGATAAACT",10,71.55,10.83,0.07,0.04,2.94,1.04,0,">1 nonsynonymous","P54A N64T",2
"lib1","SARS-CoV-2","GCTGACAAGATGTTTA",11,57.6,6.22,-4.54,0.51,1.5,1.16,0.01,">1 nonsynonymous","V37S I88G D98F K128C N157H",5
"lib1","SARS-CoV-2","GCTGACAGCCGCGATA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35D L60N D90H Q144R N157P G166* V182L",7
"lib1","SARS-CoV-2","GCTGACATTATAAAAT",4,27.24,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","C49H S113N",2
"lib1","SARS-CoV-2","GCTGACCCATAAACCG",2,14.73,9.05,-1.71,0.09,3,1.05,0.01,">1 nonsynonymous","F12L T170E",2
"lib1","SARS-CoV-2","GCTGACCTACAGATTC",4,21.08,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N107Y R136L E141W",3
"lib1","SARS-CoV-2","GCTGACGCGGGACTTA",3,51.36,10.43,-0.33,0.1,2.78,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GCTGACGGACAAGTAA",3,30.36,10.76,-0.01,0.07,2.89,1.07,0,">1 nonsynonymous","T55L N120E",2
"lib1","SARS-CoV-2","GCTGACGTCTCACTAC",5,105.23,9.99,-0.78,0.08,2.32,1.04,0,"1 nonsynonymous","F8T",1
"lib1","SARS-CoV-2","GCTGACTAAAACACAA",11,108.79,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F99I N118D G155R",3
"lib1","SARS-CoV-2","GCTGACTCTGATCCTG",5,1.05,NA,NA,NA,NA,NA,NA,"stop","F12* N30A D90A",3
"lib1","SARS-CoV-2","GCTGACTGTCCGGCGG",1,23.2,10.6,-0.17,0.07,2.84,1.07,0,"1 nonsynonymous","G152C",1
"lib1","SARS-CoV-2","GCTGAGAAATGACAGA",9,25.45,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A42S W106G Y143I",3
"lib1","SARS-CoV-2","GCTGAGAACTTTAGGG",3,33.62,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A18T I88Y Q163G",3
"lib1","SARS-CoV-2","GCTGAGAAGATTTAGG",6,82.98,9.74,-1.02,0.09,2.27,1.05,0,">1 nonsynonymous","L5S N107T",2
"lib1","SARS-CoV-2","GCTGAGAATTATTATT",4,12.55,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14D N24R V103P G152I",4
"lib1","SARS-CoV-2","GCTGAGAGTATGGCAG",6,0.66,NA,NA,NA,NA,NA,NA,"stop","G9W S129T N157S P161* Q168C K198R",6
"lib1","SARS-CoV-2","GCTGAGAGTTTGCCGA",4,23.28,7.11,-3.65,0.38,1.5,1.06,0.04,">1 nonsynonymous","W23T S41C N130L",3
"lib1","SARS-CoV-2","GCTGAGATAAGATGCT",3,33.79,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5W S19R F44N T85C D112I",5
"lib1","SARS-CoV-2","GCTGAGATAAGCAGCC",6,30.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3S Y121P Q144T N157M Y165N",5
"lib1","SARS-CoV-2","GCTGAGATATCCAAAT",4,107.84,9.41,-1.35,0.07,2.79,1.14,0,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","GCTGAGATCTCCTCAC",10,146.96,8.18,-2.58,0.15,2.23,1.11,0.01,">1 nonsynonymous","S113Q Y119V",2
"lib1","SARS-CoV-2","GCTGAGCACTCAAAAA",3,37.07,10.72,-0.04,0.05,2.9,1.04,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","GCTGAGCCAGCAATTG",11,120.22,10.25,-0.51,0.05,2.89,1.04,0,">1 nonsynonymous","K87C P149L K198H",3
"lib1","SARS-CoV-2","GCTGAGCTATTCTCAC",1,23.44,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","P82L D90Y",2
"lib1","SARS-CoV-2","GCTGAGCTTAGAAAAA",1,24.38,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N58C A89C W106R",3
"lib1","SARS-CoV-2","GCTGAGGAAGATATGT",1,12.85,6.85,-3.92,0.5,1.5,1.17,0.05,">1 nonsynonymous","W23A A81L G146V G152N G166L",5
"lib1","SARS-CoV-2","GCTGAGGTATGTGCTA",3,2.93,NA,NA,NA,NA,NA,NA,"stop","A42L V71* D137L C158E",4
"lib1","SARS-CoV-2","GCTGAGTTGAAATCAG",4,13.49,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","R25T E76G I104N K128V R136P",5
"lib1","SARS-CoV-2","GCTGAGTTGCCACCGT",3,28.18,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9S S41A P54L D98R C158N",5
"lib1","SARS-CoV-2","GCTGATAACGAATAAG",3,27.65,7.28,-3.49,0.38,1.5,1.17,0.04,">1 nonsynonymous","L5P F12G I142S",3
"lib1","SARS-CoV-2","GCTGATACAGCTTCAT",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S T100L S184P",3
"lib1","SARS-CoV-2","GCTGATAGATTATTTC",1,16.63,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","D112W",1
"lib1","SARS-CoV-2","GCTGATATGCAATACA",3,1.1,NA,NA,NA,NA,NA,NA,"stop","V37Y F99* P149S T201A",4
"lib1","SARS-CoV-2","GCTGATATTCGTCTAA",4,1.22,NA,NA,NA,NA,NA,NA,"stop","D34F A42* A145V",3
"lib1","SARS-CoV-2","GCTGATCACAAAATTA",7,0.89,NA,NA,NA,NA,NA,NA,"stop","C102A P149T V173* K199S",4
"lib1","SARS-CoV-2","GCTGATCCCCAGTTAA",4,3.16,NA,NA,NA,NA,NA,NA,"stop","G86* G152T",2
"lib1","SARS-CoV-2","GCTGATCCGTATTTTT",3,55.5,10.2,-0.56,0.12,2.56,1,0.01,"1 nonsynonymous","R25T",1
"lib1","SARS-CoV-2","GCTGATCCTATGACAG",15,8.39,NA,NA,NA,NA,NA,NA,"stop","Y93R D112L E135* T140V",4
"lib1","SARS-CoV-2","GCTGATCGGCGCCCTG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","F12N K87* D97N I104Q",4
"lib1","SARS-CoV-2","GCTGATCTCAATCTAA",1,30.18,6,-4.76,0.91,1.5,1.12,0.01,">1 nonsynonymous","V11H R27W L57Y N64A F70G P96S F156L",7
"lib1","SARS-CoV-2","GCTGATGAATTGAACA",4,33.59,10.42,-0.35,0.11,2.62,1.04,0.01,">1 nonsynonymous","Y39Q Y66A Y123F S147H",4
"lib1","SARS-CoV-2","GCTGATGACTACCTTG",2,5.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97W G117P N151P",3
"lib1","SARS-CoV-2","GCTGATGCGTCTTAAG",6,50.67,10.83,0.07,0.09,2.79,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGATTCCAAAGCAA",3,28.75,6.63,-4.13,0.49,1.5,1.15,0.02,">1 nonsynonymous","N1T F12K A105L L131N F156L G174H K199V",7
"lib1","SARS-CoV-2","GCTGATTGTCATAATT",9,144.39,8.08,-2.68,0.19,2.27,1.15,0.01,">1 nonsynonymous","G9P A145E T170D",3
"lib1","SARS-CoV-2","GCTGATTTATTTGAAT",3,21.19,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","N1E F99G K132D F156M",4
"lib1","SARS-CoV-2","GCTGATTTTTAAAGGG",3,87.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33R S45H R78Q Y123S G155L",5
"lib1","SARS-CoV-2","GCTGCAAGTACCTACC",1,22.55,10.85,0.08,0.07,2.91,1.07,0,">1 nonsynonymous","L122A S129R",2
"lib1","SARS-CoV-2","GCTGCAAGTGTCAATA",7,1.31,NA,NA,NA,NA,NA,NA,"stop","S19* C61I A105P K198L",4
"lib1","SARS-CoV-2","GCTGCAATATGACATA",4,114.93,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S29A Y39F C49N K56H D98T",5
"lib1","SARS-CoV-2","GCTGCACATGACCACT",7,111.69,9.18,-1.59,0.12,2.47,1.19,0.01,">1 nonsynonymous","A33K F62I S164G A192T G196W",5
"lib1","SARS-CoV-2","GCTGCACGCATTCGAT",5,2.68,NA,NA,NA,NA,NA,NA,"stop","C158H N171S S200*",3
"lib1","SARS-CoV-2","GCTGCACTGCCCATCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y R16V Y39R R127Y I142L",5
"lib1","SARS-CoV-2","GCTGCATTTGCCTTGC",5,66.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93M",1
"lib1","SARS-CoV-2","GCTGCCAAAGCCCAAA",1,33.61,9.03,-1.73,0.11,2.59,1.23,0,">1 nonsynonymous","L5P L60V G146R L188V",4
"lib1","SARS-CoV-2","GCTGCCATTAAAACCC",8,92.31,9.81,-0.96,0.14,2.01,1.02,0.01,">1 nonsynonymous","G51F T85A",2
"lib1","SARS-CoV-2","GCTGCCCGAAACCATC",2,20.36,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","S113D G146R",2
"lib1","SARS-CoV-2","GCTGCCCTAAATAGTA",4,69.96,10.61,-0.16,0.03,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGCCGGAACTATGA",4,33.44,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","P7H F62A Y93H S129C T201K",5
"lib1","SARS-CoV-2","GCTGCCTGAGACTCAT",7,180.59,6.52,-4.24,0.23,1.5,1.15,0.01,">1 nonsynonymous","C150W F156L",2
"lib1","SARS-CoV-2","GCTGCGATCTGACCCA",4,28.57,10.33,-0.44,0.04,2.96,1,0,">1 nonsynonymous","F44E S45F",2
"lib1","SARS-CoV-2","GCTGCGCAACGTTCTG",5,61.47,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y121G N157L",2
"lib1","SARS-CoV-2","GCTGCGCATCAACCAC",4,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V P82L E141F A190I",4
"lib1","SARS-CoV-2","GCTGCGCTATAACGAC",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C6I G83*",2
"lib1","SARS-CoV-2","GCTGCGTAACCCAGCA",1,56.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9I T46Y K56Q D68G C150F",5
"lib1","SARS-CoV-2","GCTGCGTCATTTAACA",1,91.4,10.06,-0.7,0.08,2.75,1.01,0,"1 nonsynonymous","S19Q",1
"lib1","SARS-CoV-2","GCTGCGTCCTAAGTAA",2,26.69,10.65,-0.12,0.05,2.86,1.01,0,">1 nonsynonymous","V32W P54S N64M",3
"lib1","SARS-CoV-2","GCTGCTACTTTGTTCT",9,61.65,6.11,-4.66,0.73,1.5,1.22,0.02,">1 nonsynonymous","C49M F62G Y93A P149T F160I G172L",6
"lib1","SARS-CoV-2","GCTGCTAGGTTACCTG",3,31,6.85,-3.91,0.27,1.5,1.21,0.01,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","GCTGCTATGGCTTACG",3,2.76,NA,NA,NA,NA,NA,NA,"stop","D34A F47A K56C Q79* I104A F156L",6
"lib1","SARS-CoV-2","GCTGCTCCTCAAATAT",1,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57H R127L",2
"lib1","SARS-CoV-2","GCTGCTCGGCCAATGA",6,70.46,8.66,-2.1,0.19,1.5,1.03,0.02,">1 nonsynonymous","F99K G101V F160M",3
"lib1","SARS-CoV-2","GCTGCTCGTTATATAC",5,95.57,7.69,-3.08,0.15,1.62,1.1,0.01,">1 nonsynonymous","A33E S113N",2
"lib1","SARS-CoV-2","GCTGCTGCACATCTTA",6,41.14,10.67,-0.09,0.04,2.91,1.06,0,">1 nonsynonymous","S41H L187T",2
"lib1","SARS-CoV-2","GCTGCTTCCACTATCC",10,172.66,6.08,-4.69,0.59,1.5,1.16,0.01,">1 nonsynonymous","Y123D R179F",2
"lib1","SARS-CoV-2","GCTGGAAAACTCGTAT",1,103.54,8.31,-2.45,0.12,2.42,1.11,0.01,">1 nonsynonymous","P7L Q168E P177A",3
"lib1","SARS-CoV-2","GCTGGAAGACATAACA",8,136.74,10.22,-0.55,0.05,2.82,1.01,0,">1 nonsynonymous","C61L D90T",2
"lib1","SARS-CoV-2","GCTGGAATGCCTCGTC",4,3.72,NA,NA,NA,NA,NA,NA,"stop","T63H D97G I104* I142M T148S",5
"lib1","SARS-CoV-2","GCTGGACACGTTAGGG",2,66.24,10.73,-0.04,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGGACTCCCTGGCT",5,12.38,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G9P Q84L Y91Q D98H W106R R127V P169I",7
"lib1","SARS-CoV-2","GCTGGACTCTTGGTAA",3,105.05,6,-4.76,2,3,1.15,0,">1 nonsynonymous","P82S K114S N118R",3
"lib1","SARS-CoV-2","GCTGGACTTAAGGATG",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L N130R",2
"lib1","SARS-CoV-2","GCTGGAGACTCCCGCC",3,82.9,9.51,-1.25,0.13,2.08,1.08,0.01,">1 nonsynonymous","L57N K87T D97Y N130Q E141K",5
"lib1","SARS-CoV-2","GCTGGAGATCACTTAT",3,55.28,10.06,-0.71,0.06,2.82,1.03,0,">1 nonsynonymous","D97N Y123R F134S P197T",4
"lib1","SARS-CoV-2","GCTGGAGTAAATTTGC",2,37.9,10.64,-0.12,0.06,2.95,1,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","GCTGGATTTATTATAG",3,75.05,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F17V Y93G F156K",3
"lib1","SARS-CoV-2","GCTGGCACAATTATAG",5,64.58,9.29,-1.47,0.11,2.63,1.11,0,">1 nonsynonymous","K128F P169G",2
"lib1","SARS-CoV-2","GCTGGCAGTGCTCAAT",8,54.01,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C49I Q84R E154A R179K",4
"lib1","SARS-CoV-2","GCTGGCATGGGACTGG",2,17.02,10.47,-0.29,0.16,2.83,1.07,0.01,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","GCTGGCCCCGTCACAA",1,24.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T Y91D D97L",3
"lib1","SARS-CoV-2","GCTGGCCCTACAGATA",3,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L D68H E76K A145C",4
"lib1","SARS-CoV-2","GCTGGCGAGTGTAGCC",3,0.71,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCTGGCGCTACGAGAC",2,12.76,10.47,-0.3,0.08,3,1,0,">1 nonsynonymous","K114V T140I",2
"lib1","SARS-CoV-2","GCTGGCGGAATTACGA",3,16.08,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92D G172S V181S",3
"lib1","SARS-CoV-2","GCTGGGACAAGAAATT",2,15.93,10.75,-0.01,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGGGGATTTGAAAT",9,6.24,NA,NA,NA,NA,NA,NA,"stop","R73G K87V D97* L187Q",4
"lib1","SARS-CoV-2","GCTGGTAAGACTAAGT",2,10.95,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","E76K W106S G174M",3
"lib1","SARS-CoV-2","GCTGGTAATGTGCCCA",7,5.27,NA,NA,NA,NA,NA,NA,"stop","N24* T100E Y143S K199M",4
"lib1","SARS-CoV-2","GCTGGTCCTAAAACAG",3,105.14,8.07,-2.69,0.16,2.29,1.08,0.01,">1 nonsynonymous","K87D G146Q",2
"lib1","SARS-CoV-2","GCTGGTGAAGCGAATT",7,147.19,9.89,-0.87,0.09,2.28,1.08,0,">1 nonsynonymous","Y35P F62I P133W",3
"lib1","SARS-CoV-2","GCTGGTGCGATCGCGC",3,56.69,10.03,-0.74,0.1,2.23,1.07,0,">1 nonsynonymous","E10S F62H F134S",3
"lib1","SARS-CoV-2","GCTGGTGTTGTCAACC",3,45.65,10.58,-0.19,0.08,2.84,1.13,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","GCTGGTTCCGGCGAAA",2,84.12,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G83N K87R D98L Q144S C158F K199W",6
"lib1","SARS-CoV-2","GCTGTAAACTGAAACG",2,62.43,7.9,-2.86,0.16,1.5,1.11,0.01,">1 nonsynonymous","S41W F160D Y175L T201S",4
"lib1","SARS-CoV-2","GCTGTAACCGACTTAA",1,58.71,9.16,-1.61,0.13,1.95,1.09,0.01,">1 nonsynonymous","N107T N151R",2
"lib1","SARS-CoV-2","GCTGTAACGATCCAAA",1,1.2,NA,NA,NA,NA,NA,NA,"stop","K87L Y175*",2
"lib1","SARS-CoV-2","GCTGTAACTAAAAATA",3,95.85,6.21,-4.56,0.75,1.5,1.3,0.02,">1 nonsynonymous","G74F D137L G146N Y175A",4
"lib1","SARS-CoV-2","GCTGTAAGTGCAGGCA",3,42.68,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","N4C Y159T",2
"lib1","SARS-CoV-2","GCTGTAATGTTAGAAA",4,134.03,6,-4.76,1.32,1.5,1.19,0.01,">1 nonsynonymous","K56A D112S Y123T",3
"lib1","SARS-CoV-2","GCTGTACCATATCTGT",6,46.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V71H N110K",2
"lib1","SARS-CoV-2","GCTGTACCGCACTACA",1,8.18,6,-4.76,2,3,1.06,0,">1 nonsynonymous","V52C R179S K198T",3
"lib1","SARS-CoV-2","GCTGTACGACAGTATA",1,16.41,9.37,-1.4,0.32,1.5,1,0.04,">1 nonsynonymous","W106L V115L Y121L",3
"lib1","SARS-CoV-2","GCTGTACTAACATCTG",1,41.7,7.89,-2.87,0.23,1.5,1.12,0.02,">1 nonsynonymous","T55Y R127L E141S S147L",4
"lib1","SARS-CoV-2","GCTGTAGCCATGGATG",7,130.58,6,-4.76,2,3,1.14,0,">1 nonsynonymous","K56V S113N Y165I",3
"lib1","SARS-CoV-2","GCTGTATAATTGCTAT",2,30.06,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S41G C61V K87E Y119S E135M",5
"lib1","SARS-CoV-2","GCTGTATCGAAGTCAC",4,61.32,10.77,0.01,0.07,2.9,1.03,0,">1 nonsynonymous","L60S T85R V173Q",3
"lib1","SARS-CoV-2","GCTGTATGCATCCCCC",1,72.62,7.82,-2.95,0.16,1.71,1.15,0.01,">1 nonsynonymous","A67F G117D F160T",3
"lib1","SARS-CoV-2","GCTGTATTAACAGATA",2,0.95,NA,NA,NA,NA,NA,NA,"stop","V11* T15Y A33L A81T T85Y P133L S184R",7
"lib1","SARS-CoV-2","GCTGTATTCAGATGTT",1,35.93,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D112E P177I",2
"lib1","SARS-CoV-2","GCTGTATTCCGAGTAC",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S A81P K94P",3
"lib1","SARS-CoV-2","GCTGTATTCTCGACCA",5,18.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61F T85I T100P G116R T170S",5
"lib1","SARS-CoV-2","GCTGTATTGTATTGAG",2,28.31,10.67,-0.1,0.08,2.97,1.04,0,">1 nonsynonymous","K56L T85S",2
"lib1","SARS-CoV-2","GCTGTATTTAATAAAG",12,4.01,NA,NA,NA,NA,NA,NA,"stop","C6A I28* F99Y P149N T201M",5
"lib1","SARS-CoV-2","GCTGTCATCCTATAAA",10,47.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S53F Y93P K132Y P149L T170G",5
"lib1","SARS-CoV-2","GCTGTCATTCCAACCG",7,80.88,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C102F C150D Y178D",3
"lib1","SARS-CoV-2","GCTGTCCTAATAAATT",1,26.74,9.79,-0.97,0.06,2.9,1,0,">1 nonsynonymous","Y119K L183F P197I",3
"lib1","SARS-CoV-2","GCTGTCGAATGTTATC",3,25.26,9.45,-1.31,0.23,1.5,1,0.03,">1 nonsynonymous","P7T R27P V77T",3
"lib1","SARS-CoV-2","GCTGTCGCTAGCCTAA",1,14.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14T D34Y V37S A81T C150R",5
"lib1","SARS-CoV-2","GCTGTCTATGCTCTAC",3,56.65,10.8,0.03,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGTCTATGTCATAA",2,12.73,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C6M N30A L38S N58K V103M",5
"lib1","SARS-CoV-2","GCTGTCTCTATATGAC",5,41.2,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F44N Y50L G86E Q168I A192V",5
"lib1","SARS-CoV-2","GCTGTCTGTCTAGCTG",1,9.18,6.41,-4.36,0.3,1.5,1.04,0,">1 nonsynonymous","R127L N151Q K198D",3
"lib1","SARS-CoV-2","GCTGTGCCCTAAATAA",6,135.4,10.21,-0.55,0.1,2.32,1.02,0,">1 nonsynonymous","S36L Y123M F160L",3
"lib1","SARS-CoV-2","GCTGTGTCAGCCTTAT",5,105.68,8.14,-2.63,0.15,2.09,1.12,0.01,">1 nonsynonymous","R136K Y175V",2
"lib1","SARS-CoV-2","GCTGTGTGTATTGAAT",2,43.04,10.56,-0.2,0.06,2.86,1,0,">1 nonsynonymous","T15S A18T",2
"lib1","SARS-CoV-2","GCTGTTAAACTAGGTA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","K48* K87* P96R I142Q",4
"lib1","SARS-CoV-2","GCTGTTAACCCATCGT",6,56.55,10.14,-0.63,0.11,2.42,1,0,">1 nonsynonymous","N64P T100A S139R",3
"lib1","SARS-CoV-2","GCTGTTAACCTTATTG",1,56.45,10.63,-0.13,0.05,2.95,1,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","GCTGTTACAATAGCCG",6,16.9,9.21,-1.55,0.17,1.5,1.04,0.02,">1 nonsynonymous","T3P F62E Y121K",3
"lib1","SARS-CoV-2","GCTGTTACACTAATAT",1,38.24,10.78,0.01,0.1,2.92,1,0,"1 nonsynonymous","K114Q",1
"lib1","SARS-CoV-2","GCTGTTACGTGTCTAT",4,20.16,10.88,0.12,0.1,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTGTTCATGCCGCTC",7,112.85,10.77,0,0.06,2.89,1.07,0,"1 nonsynonymous","S43Y",1
"lib1","SARS-CoV-2","GCTGTTCGCTGGGAAC",6,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L G86R V103S Y143G R179K",5
"lib1","SARS-CoV-2","GCTGTTGGGACCATTA",5,54.43,10.15,-0.61,0.07,2.88,1,0,">1 nonsynonymous","A18W Q163R",2
"lib1","SARS-CoV-2","GCTGTTGGGCCTGACT",2,75.78,10.5,-0.26,0.06,2.9,1.06,0,"1 nonsynonymous","Y175F",1
"lib1","SARS-CoV-2","GCTGTTGTAATAGTAT",4,80.64,10.87,0.1,0.09,2.9,1.03,0,">1 nonsynonymous","N58P Y66I",2
"lib1","SARS-CoV-2","GCTGTTTACGCTGGAC",2,86.94,8.28,-2.48,0.17,2.38,1.12,0.01,">1 nonsynonymous","G116S Y175M",2
"lib1","SARS-CoV-2","GCTGTTTGTATCCACG",5,17.25,8.35,-2.41,0.25,1.5,1.08,0.03,">1 nonsynonymous","S41N K56L L95P K132A",4
"lib1","SARS-CoV-2","GCTTAAAAACACCCAC",3,29.57,6.27,-4.49,0.61,1.5,1.16,0.01,">1 nonsynonymous","A67R G146A V173C",3
"lib1","SARS-CoV-2","GCTTAAAAAGGGAACT",5,92.04,10.79,0.02,0.06,2.95,1.03,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","GCTTAAAACCAATAAT",3,73.68,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9T S19Q V37I F44W P133R",5
"lib1","SARS-CoV-2","GCTTAAAACCTATTGA",4,6.72,NA,NA,NA,NA,NA,NA,"stop","R25T S36Q S43I S69* P177G",5
"lib1","SARS-CoV-2","GCTTAAAACGTAGGGA",3,5.19,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P96Y W106L F156G",3
"lib1","SARS-CoV-2","GCTTAAAAGATCCGGC",2,66.93,9.84,-0.93,0.04,2.88,1.04,0,">1 nonsynonymous","V37I F44L F62P F156P",4
"lib1","SARS-CoV-2","GCTTAAAAGCGCCATG",2,11.77,10.01,-0.76,0.13,1.99,1.07,0.01,">1 nonsynonymous","N13Y I28W V77T",3
"lib1","SARS-CoV-2","GCTTAAACAAACCATG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* R25S S43L T55R L187R",5
"lib1","SARS-CoV-2","GCTTAAACATTTATTA",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L K48L F167S",3
"lib1","SARS-CoV-2","GCTTAAAGAACATAAG",4,22.31,10.01,-0.76,0.08,2.74,1,0,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","GCTTAAATTATAGAGC",8,57.07,6,-4.76,1.28,1.5,1.15,0.02,">1 nonsynonymous","G9V D112R Y119G",3
"lib1","SARS-CoV-2","GCTTAAATTGGTGATA",21,432.86,10.2,-0.57,0.03,2.86,1.04,0,">1 nonsynonymous","F44L G116Q",2
"lib1","SARS-CoV-2","GCTTAACATTAACTGT",3,10.27,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","G9R A14G V77W",3
"lib1","SARS-CoV-2","GCTTAACGATAATTAT",3,98.88,10.78,0.01,0.07,2.91,1.05,0,">1 nonsynonymous","D98S T201I",2
"lib1","SARS-CoV-2","GCTTAACTGCCAATGA",3,68.45,10.25,-0.51,0.05,2.92,1.07,0,">1 nonsynonymous","I2Y E154V P197T",3
"lib1","SARS-CoV-2","GCTTAAGAAATCGCAA",1,67.29,10.79,0.02,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTAAGATTGACTGA",2,60.03,10.34,-0.43,0.06,2.89,1,0,">1 nonsynonymous","T63Q R78W Q84M E141R",4
"lib1","SARS-CoV-2","GCTTAAGCTTTACTCG",6,19.67,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S29G P149E C158R G174Y",4
"lib1","SARS-CoV-2","GCTTAAGGCCACAGTA",2,17.17,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T100R C102S G152F",3
"lib1","SARS-CoV-2","GCTTAATACGAGTATC",6,167.63,7.93,-2.83,0.16,2.28,1.13,0.01,">1 nonsynonymous","N64A G152C Y159V",3
"lib1","SARS-CoV-2","GCTTAATCGCAACTGC",7,123.04,10.73,-0.03,0.06,2.91,1.08,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GCTTAATCGCCGCATT",4,0,NA,NA,NA,NA,NA,NA,"stop","S45C A89H D97S N120* P197*",5
"lib1","SARS-CoV-2","GCTTAATCGTTTTTAA",3,107.85,6,-4.76,1.16,1.5,1.14,0.01,">1 nonsynonymous","F12V L60E N107I Y121F",4
"lib1","SARS-CoV-2","GCTTAATGGTGGCATT",1,7.63,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","I88S K94S G116F P161W",4
"lib1","SARS-CoV-2","GCTTAATTAAGTAGAC",3,51.09,9.92,-0.85,0.18,2.03,1.14,0.02,">1 nonsynonymous","T3D C49F",2
"lib1","SARS-CoV-2","GCTTACAAATGCAGTA",3,51.15,10.31,-0.45,0.06,2.9,1.02,0,">1 nonsynonymous","D75W T201L",2
"lib1","SARS-CoV-2","GCTTACAAGGATATTA",3,7.05,7.81,-2.95,0.25,1.5,1.04,0.02,">1 nonsynonymous","A81Q R127L T201H",3
"lib1","SARS-CoV-2","GCTTACACCGCTGCGC",8,281.93,9.33,-1.44,0.05,2.79,1.1,0,"1 nonsynonymous","Q176A",1
"lib1","SARS-CoV-2","GCTTACAGCAGTTCCC",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S T140F",2
"lib1","SARS-CoV-2","GCTTACATAGCACACT",3,96.27,10.72,-0.04,0.05,3,1,0,"1 nonsynonymous","V65A",1
"lib1","SARS-CoV-2","GCTTACATGTCAGAAA",5,81.09,10.7,-0.07,0.11,2.74,1.08,0,"1 nonsynonymous","D90E",1
"lib1","SARS-CoV-2","GCTTACGAAGTTAGGT",18,438.04,10.78,0.01,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTACGACAGCAAAG",6,39.15,10.01,-0.75,0.11,1.79,1.09,0,">1 nonsynonymous","I104C P133T",2
"lib1","SARS-CoV-2","GCTTACGCTGTGCTTA",2,63.93,6,-4.76,2,3,1.2,0,">1 nonsynonymous","R25Q S43L A67T S69I W106K Q176C",6
"lib1","SARS-CoV-2","GCTTACGGGACGAACT",6,110.23,10.55,-0.22,0.05,2.86,1.01,0,">1 nonsynonymous","T15R S45D",2
"lib1","SARS-CoV-2","GCTTACGTTAACATAA",3,17.83,6,-4.76,1.42,3,1.05,0,">1 nonsynonymous","V20Q P54Q N107L",3
"lib1","SARS-CoV-2","GCTTACTCAAAATAAG",5,2.31,NA,NA,NA,NA,NA,NA,"stop","Y35* N171S",2
"lib1","SARS-CoV-2","GCTTACTCCACAATAT",1,48.73,10.69,-0.08,0.06,2.97,1.03,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","GCTTAGAAAATAGAAT",9,2.4,NA,NA,NA,NA,NA,NA,"stop","Y119* P169T",2
"lib1","SARS-CoV-2","GCTTAGAACTTTCACA",3,38.88,9.48,-1.28,0.08,2.8,1.08,0,">1 nonsynonymous","D90L Y119N T201L",3
"lib1","SARS-CoV-2","GCTTAGACACTATAAA",2,17.9,7.26,-3.5,0.45,1.5,1.08,0.05,">1 nonsynonymous","G117V D137S",2
"lib1","SARS-CoV-2","GCTTAGACCATTAAGT",1,4.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44A",1
"lib1","SARS-CoV-2","GCTTAGAGTATAAGCG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I28T G83V Y119* G146P K198F",5
"lib1","SARS-CoV-2","GCTTAGATTATGTTTT",3,14.71,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G9S S41M N92F N107K P197T",5
"lib1","SARS-CoV-2","GCTTAGCATAATCAAA",7,18.28,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","GCTTAGCGTAGACGAA",14,109.82,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6Y N40G S69V W106V G152N Y165L T201S",7
"lib1","SARS-CoV-2","GCTTAGGATATAAGAA",7,37.95,10.79,0.03,0.09,2.87,1.09,0,">1 nonsynonymous","I2V D90R",2
"lib1","SARS-CoV-2","GCTTAGGCAAGCCAAC",6,228.55,10.13,-0.63,0.05,2.96,1,0,"1 nonsynonymous","F126V",1
"lib1","SARS-CoV-2","GCTTAGGGTTCTAACG",2,29.27,10.25,-0.51,0.1,2.72,1,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","GCTTAGGTTACAACGT",1,22.31,10.25,-0.52,0.07,2.88,1,0,">1 nonsynonymous","Y91I F160S",2
"lib1","SARS-CoV-2","GCTTAGTCCGGCTGAT",2,8.55,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7T C102S K114V F134Y",4
"lib1","SARS-CoV-2","GCTTAGTTGTACCGCA",6,35.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99I N107Y",2
"lib1","SARS-CoV-2","GCTTAGTTTTATATGC",2,42.92,9.38,-1.39,0.09,2.83,1.07,0,">1 nonsynonymous","T3R Y119M",2
"lib1","SARS-CoV-2","GCTTATAACTTGTATT",4,17.28,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N4Y R124F Y175M",3
"lib1","SARS-CoV-2","GCTTATAAGCGAACCG",1,6.11,7.47,-3.3,0.47,2.83,1.17,0.03,">1 nonsynonymous","K114C N118H S164L T201M",4
"lib1","SARS-CoV-2","GCTTATAATTACCCAA",5,27.05,6,-4.76,2,3,1.2,0,">1 nonsynonymous","A14M G51S I88R",3
"lib1","SARS-CoV-2","GCTTATACAATCTAAA",7,61.79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64G Q168L R179A",3
"lib1","SARS-CoV-2","GCTTATACCACGATCT",6,18.53,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","Y21K N40T F160G L183P",4
"lib1","SARS-CoV-2","GCTTATATACCCCGCA",1,15.68,10.07,-0.69,0.17,1.5,1.12,0.01,">1 nonsynonymous","L95T N120M",2
"lib1","SARS-CoV-2","GCTTATATACCTCAAT",3,1.39,NA,NA,NA,NA,NA,NA,"stop","I28M C49* G101L",3
"lib1","SARS-CoV-2","GCTTATCAATGTTCTT",8,84.8,8.74,-2.03,0.14,1.64,1.13,0.01,">1 nonsynonymous","A14W Y39K P149I",3
"lib1","SARS-CoV-2","GCTTATCCGCACCGAA",6,36.94,6.39,-4.38,0.77,1.5,1.29,0.03,">1 nonsynonymous","G9Q C61S S129V G146L",4
"lib1","SARS-CoV-2","GCTTATCGCTGAATTT",2,6.86,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","T3H L95S",2
"lib1","SARS-CoV-2","GCTTATCGGGACGTTG",1,15.79,10.01,-0.76,0.13,2.87,1,0.01,">1 nonsynonymous","D97C G116A",2
"lib1","SARS-CoV-2","GCTTATGAAACTCTAA",4,15.23,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F70S F99T D112V N151A",4
"lib1","SARS-CoV-2","GCTTATGACAAAGAGG",5,80.08,7.62,-3.15,0.36,1.5,1.11,0.03,">1 nonsynonymous","S36K S45A D59H Y66N S129F I142Q",6
"lib1","SARS-CoV-2","GCTTATGATATATTGT",7,25.91,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S36D P82N P96L L125S S139I G152L F160S",7
"lib1","SARS-CoV-2","GCTTATGCGTACTGGT",1,58.24,10.26,-0.51,0.12,2.59,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTATGGGACTGCAG",1,48.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21C V37S T55S L131W",4
"lib1","SARS-CoV-2","GCTTATTAACTCTAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I V180C",2
"lib1","SARS-CoV-2","GCTTATTACAGAGTAC",4,0,NA,NA,NA,NA,NA,NA,"stop","E10* A67S S113* R124T",4
"lib1","SARS-CoV-2","GCTTATTAGAGTCCCT",1,36.61,10.82,0.06,0.04,2.92,1.05,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","GCTTATTCACTGGGTA",9,168.65,10.63,-0.14,0.06,2.92,1.02,0,">1 nonsynonymous","T46N K198Q",2
"lib1","SARS-CoV-2","GCTTATTCATACTCAA",7,58.18,6,-4.76,1.54,1.5,1.13,0.01,">1 nonsynonymous","D90G Y123K R127C F156R",4
"lib1","SARS-CoV-2","GCTTATTCATTCGCAT",1,0.11,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCTTATTGGCGACGAG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","E10S F17V S41* L125P L131* T170A",6
"lib1","SARS-CoV-2","GCTTATTTAATTAACC",2,51.74,8.98,-1.79,0.08,2.83,1.13,0,">1 nonsynonymous","C61G E154Y",2
"lib1","SARS-CoV-2","GCTTATTTCCAATATA",2,40.58,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F99L G101A F126L G166T",4
"lib1","SARS-CoV-2","GCTTCAAAAAACGCTA",3,9.38,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13P Y50T Y91L R136G G174C",5
"lib1","SARS-CoV-2","GCTTCAAACCTTATAC",1,5.68,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","G86H E141C F156L",3
"lib1","SARS-CoV-2","GCTTCAAGGTTTGTCC",2,34.85,10.63,-0.14,0.09,2.86,1.1,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","GCTTCAAGTACATTGA",1,9.33,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","G51L D59L A89W T140I V180S",5
"lib1","SARS-CoV-2","GCTTCAAGTGGCATTT",2,6.11,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","V65L G86I R127S L162S S184R",5
"lib1","SARS-CoV-2","GCTTCAATAATAAACC",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G D59V Y93R",3
"lib1","SARS-CoV-2","GCTTCAATTCATACAA",2,94.77,10.37,-0.39,0.04,2.93,1,0,">1 nonsynonymous","T3V K114A F160S V173N S200R",5
"lib1","SARS-CoV-2","GCTTCACTGGAGGCAA",4,35.67,9.69,-1.08,0.17,1.78,1.1,0.01,">1 nonsynonymous","A14V D59C S184C",3
"lib1","SARS-CoV-2","GCTTCACTTCCTTGCG",3,79.68,9.51,-1.26,0.08,2.49,1.11,0,">1 nonsynonymous","L60F G155Y P191R",3
"lib1","SARS-CoV-2","GCTTCATAATCTATTA",10,78.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F17N N107D K128H",3
"lib1","SARS-CoV-2","GCTTCCAACAACCCCA",4,17.87,10.33,-0.44,0.09,2.78,1,0,">1 nonsynonymous","A42Y I88V",2
"lib1","SARS-CoV-2","GCTTCCAACTAAAAGC",4,1.56,NA,NA,NA,NA,NA,NA,"stop","Y39F D98T Y121* G152D",4
"lib1","SARS-CoV-2","GCTTCCCAGTAACTTG",3,37.42,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25D S43V D90F",3
"lib1","SARS-CoV-2","GCTTCCCCCTCAAAAT",2,17.09,8.44,-2.33,0.24,2.14,1.1,0.04,">1 nonsynonymous","N1C K87C I142K",3
"lib1","SARS-CoV-2","GCTTCCGGTACCCGTT",2,24.25,10.13,-0.64,0.14,2.41,1.05,0.01,">1 nonsynonymous","T3R G9M V37A T85W",4
"lib1","SARS-CoV-2","GCTTCCGTCCAATTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A33K G51N L57R G83* G116A C150S",6
"lib1","SARS-CoV-2","GCTTCCGTGTCGAGAG",5,36.9,9.87,-0.89,0.12,2.48,1.03,0.01,">1 nonsynonymous","C6F A33I D98F",3
"lib1","SARS-CoV-2","GCTTCCTGACATGCAC",1,0.93,NA,NA,NA,NA,NA,NA,"stop","E10D K87* G101L",3
"lib1","SARS-CoV-2","GCTTCCTTTGAGTGTG",2,29.37,6.52,-4.25,0.63,1.5,1.1,0.05,">1 nonsynonymous","T3L F44T D68G C150N",4
"lib1","SARS-CoV-2","GCTTCGAAAAACTTCA",2,49.65,10.36,-0.4,0.04,2.96,1,0,"1 nonsynonymous","Y35G",1
"lib1","SARS-CoV-2","GCTTCGACAAGAGATG",5,0.6,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","GCTTCGAGTGGATCCT",11,74.78,9.27,-1.49,0.07,2.74,1.14,0,">1 nonsynonymous","C31T G174E",2
"lib1","SARS-CoV-2","GCTTCGATGGGACGAA",8,105.06,10.51,-0.26,0.04,2.91,1.03,0,">1 nonsynonymous","V37K G152T",2
"lib1","SARS-CoV-2","GCTTCGCCTTACACAT",6,119.15,10.23,-0.53,0.04,2.96,1.02,0,">1 nonsynonymous","N1G Q163E",2
"lib1","SARS-CoV-2","GCTTCGGCTCACACAA",3,33.83,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N120S V180N",2
"lib1","SARS-CoV-2","GCTTCGTACCCGCAAT",8,57.51,9.87,-0.89,0.12,2.15,1.07,0,">1 nonsynonymous","Y35A L60F E135A",3
"lib1","SARS-CoV-2","GCTTCTAAGAATCTAA",1,141.05,9.5,-1.27,0.11,1.92,1.08,0,">1 nonsynonymous","F12T V37M E154V",3
"lib1","SARS-CoV-2","GCTTCTAGGATTAACC",2,25.71,10.15,-0.61,0.11,2.78,1,0.01,">1 nonsynonymous","L60I E135C",2
"lib1","SARS-CoV-2","GCTTCTATACACACTA",4,63.83,7.05,-3.71,0.34,1.5,1.18,0.03,">1 nonsynonymous","V32Q Y91Q P96S G166A",4
"lib1","SARS-CoV-2","GCTTCTATCAGACTTG",3,46.67,9.84,-0.93,0.17,1.8,1.09,0.01,">1 nonsynonymous","L60R I88M",2
"lib1","SARS-CoV-2","GCTTCTATTACGGTAA",4,153.38,10.72,-0.04,0.04,2.94,1.03,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","GCTTCTCTGTAAGAAG",3,29.28,10.24,-0.53,0.08,2.85,1.04,0,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","GCTTCTGAAACCCTTG",8,29.75,6.46,-4.3,0.51,1.5,1.15,0.02,">1 nonsynonymous","R16S G83F P96L F126S S184Q",5
"lib1","SARS-CoV-2","GCTTCTGAAACGACCA",5,20.28,10.36,-0.4,0.04,2.98,1,0,">1 nonsynonymous","I2T S45C",2
"lib1","SARS-CoV-2","GCTTCTGACTCAATGC",8,1.84,NA,NA,NA,NA,NA,NA,"stop","V11T Y39R D59R V103R S139H A145W A190*",7
"lib1","SARS-CoV-2","GCTTCTGAGTTCAAAC",2,9.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P82I S129R C158S",3
"lib1","SARS-CoV-2","GCTTCTGTAAGTTCAT",9,9.96,6,-4.76,2,3,1.37,0.01,">1 nonsynonymous","T15D P96Y P149R T201R",4
"lib1","SARS-CoV-2","GCTTCTTAAAGTCTAT",3,55.07,10.67,-0.09,0.11,2.81,1.11,0.01,"1 nonsynonymous","V37T",1
"lib1","SARS-CoV-2","GCTTCTTAAGGGAGAA",11,156.97,6.44,-4.33,0.36,1.5,1.18,0.01,">1 nonsynonymous","L5S Y35L T63M G116N L131K S147N",6
"lib1","SARS-CoV-2","GCTTCTTACAATACTC",1,13.32,10.27,-0.5,0.14,2.92,1.05,0.01,">1 nonsynonymous","Y39A L60C A105S",3
"lib1","SARS-CoV-2","GCTTGAAAACTAAACC",5,128.35,7.67,-3.1,0.17,1.7,1.13,0.01,">1 nonsynonymous","N4K I104C Y175R",3
"lib1","SARS-CoV-2","GCTTGAAATTTCGTCG",1,36.97,10.37,-0.4,0.06,2.96,1.02,0,">1 nonsynonymous","S36V C61R K128P",3
"lib1","SARS-CoV-2","GCTTGACTCAGATATT",2,50.07,9.08,-1.69,0.1,2.15,1.14,0,">1 nonsynonymous","L57S P169F",2
"lib1","SARS-CoV-2","GCTTGAGCTACCGTGG",2,16.87,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L60R R73I N151S L183P",4
"lib1","SARS-CoV-2","GCTTGAGGTGACCCGA",7,21.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50E L95K T100I S164N",4
"lib1","SARS-CoV-2","GCTTGATATTCATACC",2,1.09,NA,NA,NA,NA,NA,NA,"stop","D59L N107* S129F",3
"lib1","SARS-CoV-2","GCTTGATGGCGATCTA",3,1.93,NA,NA,NA,NA,NA,NA,"stop","L38Y W106F K114* T140N",4
"lib1","SARS-CoV-2","GCTTGATGGTAAGTGA",4,86.17,8.87,-1.89,0.07,2.79,1.11,0,">1 nonsynonymous","I2Q Y143Q",2
"lib1","SARS-CoV-2","GCTTGCAAAACTCTTA",1,9.12,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G83P Y143L",2
"lib1","SARS-CoV-2","GCTTGCAAAGTTTGCT",3,62.53,10.62,-0.14,0.09,2.92,1.05,0,"1 nonsynonymous","N40G",1
"lib1","SARS-CoV-2","GCTTGCACCATTAAAT",16,223.14,9.89,-0.87,0.08,2.43,1.06,0,">1 nonsynonymous","A42K G83I G146A A192T",4
"lib1","SARS-CoV-2","GCTTGCATGAGTCGAG",6,58.35,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7L L60V G83S S113H",4
"lib1","SARS-CoV-2","GCTTGCGCCTATGACT",1,3.45,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GCTTGCGGATCAATAG",2,55.75,8.17,-2.59,0.19,1.52,1.15,0.01,">1 nonsynonymous","T63L N107Q K114G",3
"lib1","SARS-CoV-2","GCTTGTAAGTACCCTA",15,317.69,9.45,-1.32,0.06,2.82,1.1,0,">1 nonsynonymous","A42R P149K E154F",3
"lib1","SARS-CoV-2","GCTTGTAATCCCAGAA",2,10.44,8.75,-2.01,0.3,1.64,1.17,0.05,">1 nonsynonymous","C49L F156R",2
"lib1","SARS-CoV-2","GCTTGTACCCAACCCA",8,54.59,7.08,-3.69,0.29,1.55,1.17,0.02,">1 nonsynonymous","Y21K A81C N118H",3
"lib1","SARS-CoV-2","GCTTGTACCGGTACAT",2,18.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62L G86Y R127E R136M",4
"lib1","SARS-CoV-2","GCTTGTATAATTAGTT",2,78.71,10.73,-0.04,0.06,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTGTATATTGCTTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","I88A P169*",2
"lib1","SARS-CoV-2","GCTTGTGACCGCTGAT",3,49.2,8.04,-2.72,0.18,1.57,1.11,0.01,">1 nonsynonymous","L60F G146L",2
"lib1","SARS-CoV-2","GCTTGTGCGTCACTAT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","S45* K87Y E141F V181G",4
"lib1","SARS-CoV-2","GCTTGTTAATAAGTCG",2,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W D112K G146Q F156I",4
"lib1","SARS-CoV-2","GCTTGTTCACTCGATT",1,1.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","GCTTGTTGATGTGGAT",2,124.32,10.54,-0.23,0.04,2.92,1,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","GCTTGTTTATTGACAC",6,70.48,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A18R Y35H A89T F126L N171A",5
"lib1","SARS-CoV-2","GCTTTAAAATGTTAGA",11,155.92,6.13,-4.64,0.65,1.5,1.16,0.01,">1 nonsynonymous","D90T I138L N157C",3
"lib1","SARS-CoV-2","GCTTTAAACAAGATGG",3,19.29,9.29,-1.47,0.33,1.5,1,0.06,">1 nonsynonymous","A14F N24L",2
"lib1","SARS-CoV-2","GCTTTAAAGAATCCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59* V77M",2
"lib1","SARS-CoV-2","GCTTTAAAGCCTTGCG",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L K56Y L95M E141R",4
"lib1","SARS-CoV-2","GCTTTAACCAGCAGGT",8,59.47,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","D68E A105N",2
"lib1","SARS-CoV-2","GCTTTAACGAGAGGGT",4,3.67,NA,NA,NA,NA,NA,NA,"stop","F12S A89T N151* V194A",4
"lib1","SARS-CoV-2","GCTTTAAGGGTCTTGG",1,12.69,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L60K G83Y D112K T148K G166D P169N",6
"lib1","SARS-CoV-2","GCTTTAATAATTCTGC",4,40.62,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8R S129P C158W",3
"lib1","SARS-CoV-2","GCTTTAATTTGCTTGT",2,83.86,9.48,-1.28,0.05,2.86,1.1,0,">1 nonsynonymous","S45D F126C",2
"lib1","SARS-CoV-2","GCTTTAATTTTTCCCA",1,44.57,8.26,-2.51,0.23,1.5,1.11,0.02,">1 nonsynonymous","S36G Y91E",2
"lib1","SARS-CoV-2","GCTTTACCAGGACCTA",1,119.01,10.31,-0.46,0.04,2.9,1.01,0,">1 nonsynonymous","Y35S K114R L188V",3
"lib1","SARS-CoV-2","GCTTTACCCATTTCAA",1,16.94,6.69,-4.07,0.41,1.76,1.06,0.03,">1 nonsynonymous","G116N T170H Y178D",3
"lib1","SARS-CoV-2","GCTTTACGGAAACTAA",1,5.79,6,-4.76,2,3,1.27,0.02,">1 nonsynonymous","A14R K94P W106R K114W T201R",5
"lib1","SARS-CoV-2","GCTTTACTATATACAC",1,81.3,9.4,-1.36,0.09,2.76,1.12,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GCTTTAGTCGGTGTCC",3,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q176L T201L",2
"lib1","SARS-CoV-2","GCTTTAGTCTTTATAG",1,7.16,9.07,-1.7,0.22,2.76,1.09,0.02,">1 nonsynonymous","S129F G166T",2
"lib1","SARS-CoV-2","GCTTTATAAGGAGTTC",1,23.81,10.6,-0.16,0.11,2.88,1.09,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","GCTTTATCGACGCATT",7,58.32,6.19,-4.58,0.58,1.5,1.14,0.02,">1 nonsynonymous","V37R P177I",2
"lib1","SARS-CoV-2","GCTTTATGCGTGAAAA",2,0.38,NA,NA,NA,NA,NA,NA,"stop","S113* R127K",2
"lib1","SARS-CoV-2","GCTTTCAAGTGTAATT",1,10.22,7.24,-3.53,0.53,1.5,1,0.07,">1 nonsynonymous","I2N D59K N64K N107I Q144A",5
"lib1","SARS-CoV-2","GCTTTCAGCCGAGACG",4,50.05,10.6,-0.16,0.03,2.88,1.09,0,"1 nonsynonymous","N110I",1
"lib1","SARS-CoV-2","GCTTTCCAAGCGTTAC",7,41.74,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V103W T140L G152Y",3
"lib1","SARS-CoV-2","GCTTTCCAATGATTCT",2,27.88,8.51,-2.25,0.13,2.5,1.05,0.01,">1 nonsynonymous","V37L K132N N157F",3
"lib1","SARS-CoV-2","GCTTTCCACATTAAAG",15,207.07,10.71,-0.05,0.05,2.88,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GCTTTCCACGAGAACA",6,106.46,10.48,-0.29,0.05,2.9,1.03,0,">1 nonsynonymous","N64S N107P",2
"lib1","SARS-CoV-2","GCTTTCCCAAACATGT",2,8.89,NA,NA,NA,NA,NA,0.16,"wildtype","",0
"lib1","SARS-CoV-2","GCTTTCGAGTGCTAGA",4,1.84,NA,NA,NA,NA,NA,NA,"stop","A81* A105K P133G C150M",4
"lib1","SARS-CoV-2","GCTTTCTATGTTAACA",2,70.25,10.68,-0.08,0.04,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTTCTCAGTATTCA",8,44.15,6.16,-4.6,0.62,1.5,1.1,0.01,">1 nonsynonymous","Y91L S108E Q144H C150M",4
"lib1","SARS-CoV-2","GCTTTCTGATGGCCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A22S K87I Y123E Q168T G174V",6
"lib1","SARS-CoV-2","GCTTTCTTAGCAACCG",4,65.2,8.73,-2.03,0.13,1.79,1.14,0.01,">1 nonsynonymous","Y50H L60F E154C",3
"lib1","SARS-CoV-2","GCTTTCTTGATAGCCC",6,27.41,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","Y50H K94P N107R",3
"lib1","SARS-CoV-2","GCTTTCTTGGATTTCG",17,156.36,10.72,-0.05,0.04,2.93,1.01,0,">1 nonsynonymous","T3P V37Y",2
"lib1","SARS-CoV-2","GCTTTGAATCAAGTTG",1,68.54,10.73,-0.03,0.04,2.92,1.05,0,"1 nonsynonymous","Y121F",1
"lib1","SARS-CoV-2","GCTTTGACCACAAACG",1,34.59,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12S Y35S A89R D98C N107D",5
"lib1","SARS-CoV-2","GCTTTGACCTCACAAG",4,145.96,10.59,-0.18,0.05,2.93,1.04,0,"1 nonsynonymous","P169S",1
"lib1","SARS-CoV-2","GCTTTGACTTCATTGA",4,110.85,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88N Q144S F167P Q176V",4
"lib1","SARS-CoV-2","GCTTTGAGAACATTTG",1,19.63,10.22,-0.55,0.1,2.81,1.04,0.01,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","GCTTTGATAGATTAGT",5,62.68,10.57,-0.19,0.06,2.94,1.05,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","GCTTTGATTACTAAAA",7,24.92,6,-4.76,1.31,1.5,1.24,0.04,">1 nonsynonymous","A14Y S41F D98G Y165K P197L",5
"lib1","SARS-CoV-2","GCTTTGCAAACTAGAA",3,18.9,7.22,-3.54,0.5,1.5,1.1,0.06,">1 nonsynonymous","W23R K87Y N120L",3
"lib1","SARS-CoV-2","GCTTTGGAAGTAGTTA",2,37.97,10.3,-0.46,0.1,2.89,1.08,0,">1 nonsynonymous","G9R I142F",2
"lib1","SARS-CoV-2","GCTTTGGCGTTCAAAT",4,50.39,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","E10D P82E N157G",3
"lib1","SARS-CoV-2","GCTTTGTCATAAGGTA",11,52.3,8.6,-2.17,0.23,1.5,1.11,0.02,">1 nonsynonymous","A33R L38H Y91L S164R",4
"lib1","SARS-CoV-2","GCTTTGTCCACACATT",4,114.71,9.83,-0.93,0.08,2.01,1.03,0,"1 nonsynonymous","I88C",1
"lib1","SARS-CoV-2","GCTTTGTCTGGTAAAA",6,49.38,8.9,-1.87,0.21,1.64,1.1,0.02,">1 nonsynonymous","D90Y S139H F160I S200G",4
"lib1","SARS-CoV-2","GCTTTGTTATATAGTT",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32T C158L",2
"lib1","SARS-CoV-2","GCTTTTAAATTGTAAT",3,17.2,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V71S A89K L162K",3
"lib1","SARS-CoV-2","GCTTTTAACACAAACA",9,67.5,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49V Y91T N109I",3
"lib1","SARS-CoV-2","GCTTTTAATATATGTG",2,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S K56L N107I G146V",4
"lib1","SARS-CoV-2","GCTTTTAATCCTATGC",6,65.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N Y35M V71C Y178R",4
"lib1","SARS-CoV-2","GCTTTTACACCTTGAT",2,30.87,7.18,-3.58,0.42,1.5,1.16,0.05,"1 nonsynonymous","R179I",1
"lib1","SARS-CoV-2","GCTTTTACCAATTGGT",2,22.96,6,-4.76,2,3,1.07,0,">1 nonsynonymous","K87F R127P G166E Q176S",4
"lib1","SARS-CoV-2","GCTTTTACCCGCGTCA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","E10G W23*",2
"lib1","SARS-CoV-2","GCTTTTAGCGGCAGTG",3,47.85,10.19,-0.57,0.04,2.92,1,0,">1 nonsynonymous","N4I K128R F156A",3
"lib1","SARS-CoV-2","GCTTTTAGGGCCGAAG",4,79.01,10.45,-0.32,0.06,2.86,1.05,0,">1 nonsynonymous","N1F G9S S43Y D90S T201K",5
"lib1","SARS-CoV-2","GCTTTTAGTTATTGAC",3,32.83,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","N92Y V103G",2
"lib1","SARS-CoV-2","GCTTTTCACAGTAATA",5,23.19,10.22,-0.55,0.05,2.91,1,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","GCTTTTCCATTATTAG",5,28.37,10.81,0.04,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GCTTTTCGAGACGCCA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I28* S36E F167N",3
"lib1","SARS-CoV-2","GCTTTTCGATTAGGTC",2,22.61,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G86V K132G G174E",3
"lib1","SARS-CoV-2","GCTTTTCGGTGGAAAT",3,101.63,10.92,0.15,0.08,2.82,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GCTTTTGCTAAAGCTA",14,153.96,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V11Y V103T E141D Q176R K198H",5
"lib1","SARS-CoV-2","GCTTTTTGCACGAGTT",5,46.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V S69T G86T G166E",4
"lib1","SARS-CoV-2","GCTTTTTGGCTCATAA",1,19.27,10.69,-0.07,0.07,2.9,1.08,0,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","GGAAAAAAGAATCACG",2,25.86,10.71,-0.06,0.14,2.89,1.05,0.01,"1 nonsynonymous","S36Q",1
"lib1","SARS-CoV-2","GGAAAAAAGACCATTG",10,161.81,10.76,0,0.06,2.95,1.03,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","GGAAAAAATAACTTTG",1,7.15,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","C49D L95V I142L P149L",4
"lib1","SARS-CoV-2","GGAAAAAATCTATACA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","S36* G51D I104A",3
"lib1","SARS-CoV-2","GGAAAAACAGAACAAA",1,11.01,6.05,-4.71,1.8,1.5,1.37,0.04,">1 nonsynonymous","F44T Y121P V153I V173G",4
"lib1","SARS-CoV-2","GGAAAAACAGCCAATT",6,0.83,NA,NA,NA,NA,NA,NA,"stop","C49M Y178* K199E",3
"lib1","SARS-CoV-2","GGAAAAACATGCGAAG",1,33.9,8.92,-1.85,0.14,1.58,1.08,0.01,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","GGAAAAACCACCCATT",2,46.49,8.38,-2.38,0.13,2.4,1.12,0.01,">1 nonsynonymous","C6F Y143I",2
"lib1","SARS-CoV-2","GGAAAAACCGCGTCAA",1,97.77,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","GGAAAAACTCCCCTGT",3,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y A105N S184K",3
"lib1","SARS-CoV-2","GGAAAAACTTTTATGT",4,28.82,10.37,-0.39,0.09,2.81,1,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","GGAAAAAGATAGTGGT",3,52.29,10.62,-0.14,0.09,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAAAAAGTATGGTTT",2,1,NA,NA,NA,NA,NA,NA,"stop","D98* S113A S164M V173G",4
"lib1","SARS-CoV-2","GGAAAAATAAAGATAA",1,9.2,10.3,-0.47,0.25,2.23,1,0.04,">1 nonsynonymous","L5A Y35G F44V",3
"lib1","SARS-CoV-2","GGAAAAATACAACGAA",4,68.73,8.84,-1.93,0.14,2.12,1.08,0.01,">1 nonsynonymous","N13S L60T D97L G166V",4
"lib1","SARS-CoV-2","GGAAAAATACAAGTTG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A42L L60D I80* N130I T201K",5
"lib1","SARS-CoV-2","GGAAAAATATTACAGT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","F8K Y50* C158L",3
"lib1","SARS-CoV-2","GGAAAAATGACTTATT",1,15.33,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Y39H K48C Y91S N157E G174P",5
"lib1","SARS-CoV-2","GGAAAAATTACCTTAC",4,36.88,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","S43G N64Y A89S K94H Y121P L131W S147T",7
"lib1","SARS-CoV-2","GGAAAAATTCTACACT",6,42.31,9.28,-1.48,0.16,1.78,1.18,0.01,">1 nonsynonymous","A14P G83M K128E T148N",4
"lib1","SARS-CoV-2","GGAAAAATTTAGCGAA",3,149.28,8.94,-1.82,0.05,2.79,1.1,0,"1 nonsynonymous","N171P",1
"lib1","SARS-CoV-2","GGAAAACAAAAACTAT",2,97.2,8.67,-2.09,0.11,2.59,1.08,0.01,">1 nonsynonymous","A14E G166W Y178F",3
"lib1","SARS-CoV-2","GGAAAACAAGACACAC",1,6.01,6.63,-4.14,0.5,3,1.05,0,">1 nonsynonymous","T63S R73V P96E V103P Y119P Q168C",6
"lib1","SARS-CoV-2","GGAAAACAAGATCTCG",5,46.52,6,-4.76,1.91,1.5,1.21,0.04,">1 nonsynonymous","F12P R16L T63C F99D",4
"lib1","SARS-CoV-2","GGAAAACCACTACATA",6,59.42,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14K F99L C158F",3
"lib1","SARS-CoV-2","GGAAAACCCCAAAAAA",2,1.56,NA,NA,NA,NA,NA,NA,"stop","L38W F44T C102* L122Y",4
"lib1","SARS-CoV-2","GGAAAACCCGACGAAT",12,150.49,8.03,-2.73,0.17,1.5,1.12,0.01,">1 nonsynonymous","E10V D98C N130T G155L L188A",5
"lib1","SARS-CoV-2","GGAAAACCTTGAAACA",2,66.24,8.13,-2.64,0.17,2.1,1.17,0.01,">1 nonsynonymous","S113M T140F",2
"lib1","SARS-CoV-2","GGAAAACTAGAAGCCA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E P96L N130R G174S",4
"lib1","SARS-CoV-2","GGAAAACTATGTTATA",1,18.08,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K48I N118I S139L",3
"lib1","SARS-CoV-2","GGAAAACTCAAAAACA",1,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94R T148G",2
"lib1","SARS-CoV-2","GGAAAACTTTAAATAT",8,0.4,NA,NA,NA,NA,NA,NA,"stop","L5S R27S Y35* S69G S129I V182H",6
"lib1","SARS-CoV-2","GGAAAAGAAAATCCAA",6,105.51,9.93,-0.83,0.08,1.95,1.05,0,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","GGAAAAGAACATATCC",9,141.25,8.75,-2.02,0.08,2.66,1.07,0,">1 nonsynonymous","Y66M D90N G174I",3
"lib1","SARS-CoV-2","GGAAAAGAATGAACCG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","A18Y K48S T55L N64S F99* G146D G152V Q176S L183A",9
"lib1","SARS-CoV-2","GGAAAAGAATTAAGTT",6,31.68,6,-4.76,1.29,1.5,1.17,0.02,">1 nonsynonymous","F44K G51T A105N Y143L",4
"lib1","SARS-CoV-2","GGAAAAGATATCTCTT",1,22.73,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","P7K K56Y I80M I142K E154G",5
"lib1","SARS-CoV-2","GGAAAAGATCACCATT",1,8.7,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","T3K V11R R136S Y175H",4
"lib1","SARS-CoV-2","GGAAAAGATCCAGTGC",14,61.97,8.77,-1.99,0.19,1.5,1.03,0.01,">1 nonsynonymous","Y91F V103C",2
"lib1","SARS-CoV-2","GGAAAAGATGTAAATC",6,61.85,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I2S N64L T100P F167S Y178L P197L",6
"lib1","SARS-CoV-2","GGAAAAGGGAAAACCG",2,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E Y21N D98T S129D I142Y",5
"lib1","SARS-CoV-2","GGAAAAGGTATTCTAC",3,58.26,10.41,-0.36,0.04,2.91,1.03,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","GGAAAAGTCAGCTCAT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","N13S N40E L162*",3
"lib1","SARS-CoV-2","GGAAAAGTTACGCCGG",1,17.57,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","S29R N107H G116I G146L R179N",5
"lib1","SARS-CoV-2","GGAAAATAATGCATAT",1,15.84,6.13,-4.63,1.25,1.5,1.21,0.04,">1 nonsynonymous","S41E V65K F99T L131Q P149S N157S P197T",7
"lib1","SARS-CoV-2","GGAAAATACTAGACTA",5,69.6,9.74,-1.02,0.06,2.87,1.05,0,">1 nonsynonymous","L125W A145G",2
"lib1","SARS-CoV-2","GGAAAATAGACTGTCC",4,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R S139D V181R A190Y",4
"lib1","SARS-CoV-2","GGAAAATATAAATACG",5,46.28,10.15,-0.61,0.08,2.76,1.04,0,">1 nonsynonymous","T3Q F160C P169L",3
"lib1","SARS-CoV-2","GGAAAATATCCTATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6S I138L T148* Q168C",4
"lib1","SARS-CoV-2","GGAAAATATCTTGAAC",1,60.6,10.8,0.04,0.12,2.83,1.07,0.01,"1 nonsynonymous","K128E",1
"lib1","SARS-CoV-2","GGAAAATCAGTGATCA",4,2.53,NA,NA,NA,NA,NA,NA,"stop","S43P T63* Y93H F99L N107V F126C L162K",7
"lib1","SARS-CoV-2","GGAAAATCCAACACTA",4,14.7,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A14W V37W D59C V103L Y175D",5
"lib1","SARS-CoV-2","GGAAAATGAAACAACC",2,15.01,10.01,-0.75,0.13,2.33,1,0.01,">1 nonsynonymous","I2P P133R",2
"lib1","SARS-CoV-2","GGAAAATGGTTGGCAA",3,61.49,8.97,-1.8,0.16,1.84,1.1,0.01,">1 nonsynonymous","T55G Q84L Y121S",3
"lib1","SARS-CoV-2","GGAAAATGTAGACGTT",2,9.11,7.16,-3.61,0.31,1.55,1.08,0.05,">1 nonsynonymous","W23E C31R N92V N157S",4
"lib1","SARS-CoV-2","GGAAAATGTGTGTGTC",3,28.88,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","F17H W106L C150I",3
"lib1","SARS-CoV-2","GGAAAATTATCGCCTG",3,103.32,9.73,-1.03,0.08,2.55,1.03,0,">1 nonsynonymous","V37R L57M G116H L131V",4
"lib1","SARS-CoV-2","GGAAACAAAGACTCAT",1,0.41,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib1","SARS-CoV-2","GGAAACAAATAAGCAT",7,75.01,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R16Q Q84I Y119S C150V",4
"lib1","SARS-CoV-2","GGAAACAAATATACAT",1,23.01,10.8,0.04,0.05,2.96,1,0,"1 nonsynonymous","L125M",1
"lib1","SARS-CoV-2","GGAAACAAATGATCAT",6,166.94,9.73,-1.04,0.06,2.73,1.07,0,">1 nonsynonymous","N40S S45D D90C F156Y",4
"lib1","SARS-CoV-2","GGAAACAATTGGCCAA",1,86,8.02,-2.74,0.21,2.06,1.13,0.02,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","GGAAACACGATCATAC",1,12.47,10.17,-0.6,0.13,2.64,1.26,0,">1 nonsynonymous","S43K A105T G116K",3
"lib1","SARS-CoV-2","GGAAACACTAGTGAAC",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y G74V D112P Q144I N157W",5
"lib1","SARS-CoV-2","GGAAACAGACGGGTAC",3,12.23,9.87,-0.89,0.08,2.89,1,0,">1 nonsynonymous","V37C T55I G146D",3
"lib1","SARS-CoV-2","GGAAACAGATAGACGC",8,48.26,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P82V G116V R127D G172R",4
"lib1","SARS-CoV-2","GGAAACAGGAGAGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45T T85R I104*",3
"lib1","SARS-CoV-2","GGAAACATCGACACTG",3,114.77,10.8,0.04,0.06,2.93,1.05,0,"1 nonsynonymous","N151K",1
"lib1","SARS-CoV-2","GGAAACATTGCCGAGA",5,0.03,NA,NA,NA,NA,NA,NA,"stop","F44H T63W G86Q K94P K128*",5
"lib1","SARS-CoV-2","GGAAACATTTACCATC",5,1.25,NA,NA,NA,NA,NA,NA,"stop","G9C Y35* G83H A105H",4
"lib1","SARS-CoV-2","GGAAACCATAAACATA",6,165.55,10.47,-0.3,0.06,2.91,1.03,0,">1 nonsynonymous","S36R F47W K87I",3
"lib1","SARS-CoV-2","GGAAACCATTATCGAC",9,149.75,6.12,-4.65,0.86,1.5,1.22,0.02,">1 nonsynonymous","Y39F L60A A81D D90G L122V",5
"lib1","SARS-CoV-2","GGAAACCCAGTACTCT",4,46.08,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N30R A42L S45Y V65I Y93H N157S",6
"lib1","SARS-CoV-2","GGAAACCCATGATAAA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","Y39E Y93* S113I R179P",4
"lib1","SARS-CoV-2","GGAAACCCGACGACAG",11,221.2,10.69,-0.08,0.04,2.91,1.05,0,"1 nonsynonymous","L60N",1
"lib1","SARS-CoV-2","GGAAACCCTCAAGAAC",4,112.44,10.63,-0.14,0.08,2.91,1.05,0,">1 nonsynonymous","T3R N120M",2
"lib1","SARS-CoV-2","GGAAACCGAGATCACC",8,85.96,9.75,-1.01,0.11,2.62,1.07,0,">1 nonsynonymous","K94R G152V",2
"lib1","SARS-CoV-2","GGAAACCTACAACAGA",8,65.91,9.71,-1.06,0.16,1.79,1.21,0.01,">1 nonsynonymous","C49Y I142L",2
"lib1","SARS-CoV-2","GGAAACCTGAAGTCAA",12,8.12,NA,NA,NA,NA,NA,NA,"stop","F12R A105*",2
"lib1","SARS-CoV-2","GGAAACCTTCACAATA",2,15.19,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R16L L38R L111P L122N Q168V",5
"lib1","SARS-CoV-2","GGAAACGAACAGAACC",2,23.6,10.53,-0.23,0.06,2.83,1.02,0,">1 nonsynonymous","F134T T148S V173L",3
"lib1","SARS-CoV-2","GGAAACGACCCATAAA",14,82.08,6,-4.76,2,1.5,1.26,0.04,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","GGAAACGAGGAAACGT",4,21.6,7.17,-3.59,0.33,1.5,1.1,0.03,">1 nonsynonymous","N1I S45L D97M T170L",4
"lib1","SARS-CoV-2","GGAAACGCAAGCTTCA",7,91.32,10.69,-0.07,0.03,2.94,1.03,0,">1 nonsynonymous","I2N D98Q",2
"lib1","SARS-CoV-2","GGAAACGGCCCAAAGC",8,91.12,10.71,-0.05,0.06,2.88,1.05,0,"1 nonsynonymous","G196R",1
"lib1","SARS-CoV-2","GGAAACGGGTTATGCC",6,75.69,8.36,-2.41,0.3,1.5,1.03,0.03,">1 nonsynonymous","V103L V115W",2
"lib1","SARS-CoV-2","GGAAACGTAAAAATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* V153R Q163P T201G",4
"lib1","SARS-CoV-2","GGAAACGTAGGCACCG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","F44L Y93*",2
"lib1","SARS-CoV-2","GGAAACGTTGGCGAAA",6,9.15,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S41Y A105P Y178N A190D",4
"lib1","SARS-CoV-2","GGAAACTAACGATATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21M R127L",2
"lib1","SARS-CoV-2","GGAAACTAATATGACC",3,0.3,NA,NA,NA,NA,NA,NA,"stop","V77L A81S K128* S184V",4
"lib1","SARS-CoV-2","GGAAACTATTTTGCTA",2,13.7,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y35Q S45W Y91L C102P",4
"lib1","SARS-CoV-2","GGAAACTGATTTGCTG",7,60.15,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","F12P S41V N157R Q168M",4
"lib1","SARS-CoV-2","GGAAACTTCTACTAAA",11,269.88,8.81,-1.95,0.06,2.52,1.09,0,">1 nonsynonymous","R27T Q84N A145K",3
"lib1","SARS-CoV-2","GGAAACTTGAATCTAA",15,108.74,10.75,-0.02,0.05,2.86,1.08,0,"1 nonsynonymous","T148M",1
"lib1","SARS-CoV-2","GGAAACTTTAGCCGGA",3,57.02,10.68,-0.09,0.03,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAACTTTGCTAACA",1,53.48,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","Y35N T55M S129R Y175L",4
"lib1","SARS-CoV-2","GGAAAGAAATTGAGAT",3,42.56,7.15,-3.61,0.5,1.5,1.13,0.06,">1 nonsynonymous","D34V F70H",2
"lib1","SARS-CoV-2","GGAAAGAACACTATTC",5,36.46,6.02,-4.75,1.54,1.5,1.25,0.03,">1 nonsynonymous","I88L V180N",2
"lib1","SARS-CoV-2","GGAAAGAAGCAGGAAG",9,272.25,7.31,-3.45,0.16,1.5,1.1,0.01,">1 nonsynonymous","G9R Q176C L187P",3
"lib1","SARS-CoV-2","GGAAAGAAGGCCAGGT",2,55.56,10.26,-0.51,0.03,2.9,1.06,0,">1 nonsynonymous","A33P T170S",2
"lib1","SARS-CoV-2","GGAAAGAATTAATTCA",3,45.9,10.62,-0.14,0.11,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAAGACAATCTAGG",1,25.37,8.09,-2.67,0.36,1.5,1.19,0.05,">1 nonsynonymous","S41T Y121D",2
"lib1","SARS-CoV-2","GGAAAGACAGCATCAG",6,37.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68G P96K A105Y",3
"lib1","SARS-CoV-2","GGAAAGACCCGTATTT",8,94.19,10.17,-0.59,0.05,2.87,1.04,0,">1 nonsynonymous","C6D S43G",2
"lib1","SARS-CoV-2","GGAAAGACGAAATAAG",1,18.25,10.49,-0.27,0.1,2.95,1,0,">1 nonsynonymous","K87C S200Y",2
"lib1","SARS-CoV-2","GGAAAGAGGAGAACTG",10,14.81,6.35,-4.42,0.57,2.87,1.24,0.02,">1 nonsynonymous","F12E V20M P54S E76M N130W V181S",6
"lib1","SARS-CoV-2","GGAAAGAGTGCCAAGC",8,2.18,NA,NA,NA,NA,NA,NA,"stop","V52I V65L L131M T170* Q176G",5
"lib1","SARS-CoV-2","GGAAAGCATAGTCGTT",2,10.52,10.18,-0.59,0.17,2.96,1.03,0.01,">1 nonsynonymous","S41F A190N C195A T201G",4
"lib1","SARS-CoV-2","GGAAAGCCATAATAAA",2,14.47,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19L E135M Y165M",3
"lib1","SARS-CoV-2","GGAAAGCGATACCTAG",3,7.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C49N K94V",2
"lib1","SARS-CoV-2","GGAAAGCGCAACCATT",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48E C61K G86T E186D",4
"lib1","SARS-CoV-2","GGAAAGCTTGTCACAC",7,98.2,10.81,0.05,0.08,2.88,1.05,0,">1 nonsynonymous","I28M T100Y",2
"lib1","SARS-CoV-2","GGAAAGGCGACACAAT",4,29.62,6,-4.76,2,3,1.23,0,">1 nonsynonymous","R25L F99I A105S",3
"lib1","SARS-CoV-2","GGAAAGGGGACGCTTT",4,99.56,10.72,-0.04,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAAGGTAAAGCACA",3,16.82,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N13S S43L D98G Y123L S129P R136L P149W",7
"lib1","SARS-CoV-2","GGAAAGGTATCCAGTC",4,97.44,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V32E A81G V153C Q176R",4
"lib1","SARS-CoV-2","GGAAAGGTGAAGAGGC",3,83.51,10.64,-0.13,0.04,2.93,1.03,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","GGAAAGTACAAGATGT",6,18.05,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","C6F F99D",2
"lib1","SARS-CoV-2","GGAAAGTAGCAAATAC",1,20.94,10.46,-0.3,0.09,2.88,1.08,0,">1 nonsynonymous","V37S P54C F62T",3
"lib1","SARS-CoV-2","GGAAAGTATATTTGTA",2,61.16,10.82,0.05,0.08,2.85,1.09,0,"1 nonsynonymous","S36V",1
"lib1","SARS-CoV-2","GGAAAGTGCCTCTAAG",11,116.48,9.78,-0.98,0.11,2.26,1.08,0,">1 nonsynonymous","P7Y F17L",2
"lib1","SARS-CoV-2","GGAAAGTGGATCCATC",3,74.18,9.85,-0.91,0.06,2.85,1.03,0,"1 nonsynonymous","R73A",1
"lib1","SARS-CoV-2","GGAAAGTTGTCATGGC",8,118.11,10.57,-0.19,0.08,2.81,1.16,0,">1 nonsynonymous","I138S T201W",2
"lib1","SARS-CoV-2","GGAAATAAACGAGCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* G152L",2
"lib1","SARS-CoV-2","GGAAATAAAGGTGTCG",15,56.11,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y93K Y165L",2
"lib1","SARS-CoV-2","GGAAATAAGTTGCTTT",5,0.16,NA,NA,NA,NA,NA,NA,"stop","Y35* T140S F156Y P197S",4
"lib1","SARS-CoV-2","GGAAATAATGGGGAAA",8,106.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1Y N64L A105E S113P",4
"lib1","SARS-CoV-2","GGAAATACAAAACCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","N13* V103* P149W",3
"lib1","SARS-CoV-2","GGAAATACATCCGCTT",1,27.65,9.49,-1.27,0.2,1.64,1.25,0.01,">1 nonsynonymous","S69D N130A K198L",3
"lib1","SARS-CoV-2","GGAAATACGACTGTCC",7,82.45,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T100L G117V Y175S",3
"lib1","SARS-CoV-2","GGAAATACTAAAATCA",6,51.93,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F70L P96R S200T",3
"lib1","SARS-CoV-2","GGAAATAGCACCAATA",3,84.23,10.46,-0.31,0.05,2.84,1.03,0,">1 nonsynonymous","N13R D59G F160K",3
"lib1","SARS-CoV-2","GGAAATAGCCACAACT",1,25.22,6,-4.76,0.64,1.5,1.08,0.01,">1 nonsynonymous","G51R I104E",2
"lib1","SARS-CoV-2","GGAAATAGGAACAGAG",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I P54T N120I",3
"lib1","SARS-CoV-2","GGAAATAGGTGAAAAT",4,73.11,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y93R L122T",2
"lib1","SARS-CoV-2","GGAAATAGTACTGAAC",10,175.02,10.82,0.06,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAATAGTGCCCCAA",1,41.1,9.87,-0.89,0.13,2.47,1.17,0.01,">1 nonsynonymous","I138R G152N F160L",3
"lib1","SARS-CoV-2","GGAAATATCATCACGC",5,143.51,10.03,-0.73,0.06,2.81,1.01,0,">1 nonsynonymous","Y35V K48M N151D G155A",4
"lib1","SARS-CoV-2","GGAAATCCGTTGTCAC",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C T85K N107I",3
"lib1","SARS-CoV-2","GGAAATCGACTCTATA",5,107.31,8.2,-2.56,0.17,1.5,1.16,0.01,"1 nonsynonymous","Y21K",1
"lib1","SARS-CoV-2","GGAAATCGATTCAATT",1,12.27,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V37Y Y50T I88N W106V",4
"lib1","SARS-CoV-2","GGAAATCTAGATTTAG",1,16,10.2,-0.56,0.14,2.86,1.03,0.01,">1 nonsynonymous","R27L K114Q",2
"lib1","SARS-CoV-2","GGAAATCTGCCCAGGA",4,0,NA,NA,NA,NA,NA,NA,"stop","K26* P54K R179W",3
"lib1","SARS-CoV-2","GGAAATCTGGCAGACT",4,160.52,10.3,-0.46,0.05,2.91,1,0,">1 nonsynonymous","D90Q P169N",2
"lib1","SARS-CoV-2","GGAAATGAATGGTATA",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R D112M",2
"lib1","SARS-CoV-2","GGAAATGACAAAGGAT",12,136.7,10.19,-0.58,0.07,2.77,1.04,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","GGAAATGACTATTCCG",8,121.31,6.14,-4.62,0.82,1.5,1.25,0.02,">1 nonsynonymous","F47D T55Y",2
"lib1","SARS-CoV-2","GGAAATGAGAATGTCC",8,25.12,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V103Y H189N",2
"lib1","SARS-CoV-2","GGAAATGAGTTAGCAA",5,178.39,10.01,-0.75,0.07,2.41,1.04,0,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","GGAAATGCCCAAAAAA",1,29.19,9.64,-1.13,0.15,2.12,1.2,0.01,">1 nonsynonymous","I2T R127N",2
"lib1","SARS-CoV-2","GGAAATGCCGATCACA",14,76.64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L5Y F99D",2
"lib1","SARS-CoV-2","GGAAATGCTTCTGACC",3,16.3,9.99,-0.78,0.16,2.45,1.02,0.01,"1 nonsynonymous","P133R",1
"lib1","SARS-CoV-2","GGAAATGGTAAGTGAA",4,47.97,9.38,-1.39,0.1,2.73,1.16,0,">1 nonsynonymous","P7Q A42G K48N G117T T201V",5
"lib1","SARS-CoV-2","GGAAATGTCACATACG",1,0,NA,NA,NA,NA,NA,NA,"stop","N130T F156*",2
"lib1","SARS-CoV-2","GGAAATGTTAAGAAGT",1,74.5,7.63,-3.14,0.12,1.5,1.08,0,">1 nonsynonymous","T55H A89S Y165S",3
"lib1","SARS-CoV-2","GGAAATGTTCATAGAC",2,27.45,10.77,0,0.06,2.91,1.05,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","GGAAATGTTTGGGAAT",1,33.26,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N24E K94E T148I V180M",4
"lib1","SARS-CoV-2","GGAAATTAAGTGATGC",3,33.49,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C31L A67F I88E",3
"lib1","SARS-CoV-2","GGAAATTACGAACTTG",6,84.15,10.68,-0.09,0.08,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAAATTACTCAATCA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","Y39I V77G E141* P161S",4
"lib1","SARS-CoV-2","GGAAATTAGACCGCTT",5,48.88,10.67,-0.09,0.06,2.88,1.01,0,">1 nonsynonymous","P7N F44P V173N",3
"lib1","SARS-CoV-2","GGAAATTAGGCTAATC",1,5.06,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D68K Q84W",2
"lib1","SARS-CoV-2","GGAAATTCACATGCAA",3,10.9,10.88,0.12,0.2,3,1,0.02,"1 nonsynonymous","N58D",1
"lib1","SARS-CoV-2","GGAAATTCCGCAGGTT",6,200.5,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39V D90K C102Y",3
"lib1","SARS-CoV-2","GGAAATTGAAACAATC",4,41.5,7.62,-3.15,0.28,1.5,1.09,0.02,">1 nonsynonymous","T15P F47I Y119G R127G",4
"lib1","SARS-CoV-2","GGAAATTGAACAACAA",2,61.95,6.21,-4.55,0.38,1.5,1.14,0.01,">1 nonsynonymous","C61N C150H",2
"lib1","SARS-CoV-2","GGAAATTGCCCTAAGT",14,207.86,10.03,-0.73,0.1,2.38,1.03,0,">1 nonsynonymous","G9N T15W A33L C61L",4
"lib1","SARS-CoV-2","GGAAATTGGAGTACTA",1,19.72,10.16,-0.6,0.09,2.74,1,0,">1 nonsynonymous","I2K S45L",2
"lib1","SARS-CoV-2","GGAAATTGGGCCATAA",11,162.26,10.76,-0.01,0.07,2.91,1.04,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","GGAAATTGTTCGCTCC",4,19.92,6.9,-3.86,0.92,1.5,1.19,0.07,">1 nonsynonymous","V52H N64T Y91S A105D",4
"lib1","SARS-CoV-2","GGAAATTTACGTCCGT",5,91.66,9.16,-1.61,0.08,2.81,1.14,0,">1 nonsynonymous","Q144D G166M",2
"lib1","SARS-CoV-2","GGAAATTTCACTTGCA",6,59.55,7.93,-2.84,0.2,1.57,1.17,0.01,">1 nonsynonymous","N4T S139P",2
"lib1","SARS-CoV-2","GGAAATTTTGCCGTCA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A33C A67D G86V R124K K132*",5
"lib1","SARS-CoV-2","GGAACAAAACGAATGA",7,183.89,6,-4.76,1.14,1.5,1.18,0.01,">1 nonsynonymous","Y35W K56V T85N A105H R127A",5
"lib1","SARS-CoV-2","GGAACAAACCATAACT",4,95.74,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A22S S36R D98V G166N Y175K",5
"lib1","SARS-CoV-2","GGAACAAACTATTGGA",9,116.87,10.63,-0.14,0.03,2.92,1.03,0,">1 nonsynonymous","E141R T148I A192R K198L",4
"lib1","SARS-CoV-2","GGAACAAATAGAATGG",3,5.47,7.72,-3.04,0.52,1.5,1.05,0.07,">1 nonsynonymous","A81C N157F",2
"lib1","SARS-CoV-2","GGAACAACTCATAAAT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","V37S C49P D59V K87* D98M N109*",6
"lib1","SARS-CoV-2","GGAACAAGAGTAGTAC",2,5.71,6,-4.76,2,3,1.12,0.01,"1 nonsynonymous","V77D",1
"lib1","SARS-CoV-2","GGAACAATAAGCTTAT",6,26.08,6.91,-3.85,0.41,1.5,1.19,0.04,">1 nonsynonymous","N58T A67H F99Y C102W E141H T201R",6
"lib1","SARS-CoV-2","GGAACAATATTGATAG",1,3.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","GGAACAATCCCATCAC",4,0.48,NA,NA,NA,NA,NA,NA,"stop","F44T K114N K198*",3
"lib1","SARS-CoV-2","GGAACAATCTATATTC",9,72.77,10.7,-0.06,0.09,2.85,1.03,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","GGAACACAAAAGGCTA",2,15.89,10.4,-0.36,0.07,2.69,1.14,0,">1 nonsynonymous","N1L K48C",2
"lib1","SARS-CoV-2","GGAACACAACAGGTTA",3,120.08,10.83,0.07,0.07,2.93,1.05,0,">1 nonsynonymous","Y35L T201R",2
"lib1","SARS-CoV-2","GGAACACAAGATTGAA",1,11.84,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D68A G117M",2
"lib1","SARS-CoV-2","GGAACACAATAGATAC",3,5.5,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Q84L T100L L131H V153S",4
"lib1","SARS-CoV-2","GGAACACAATGAACCA",4,32.7,6,-4.76,2,3,1.11,0,">1 nonsynonymous","V52L L57E P96F",3
"lib1","SARS-CoV-2","GGAACACACATGATTG",2,1.35,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib1","SARS-CoV-2","GGAACACACCATTATT",1,21.05,9.92,-0.85,0.32,1.5,1.06,0.05,">1 nonsynonymous","L38S K56E N64R E141L",4
"lib1","SARS-CoV-2","GGAACACACCCTAACC",9,9.69,NA,NA,NA,NA,NA,NA,"stop","G116V L122Q G152*",3
"lib1","SARS-CoV-2","GGAACACATAGGAGAA",2,34.06,10.52,-0.24,0.05,2.91,1.02,0,">1 nonsynonymous","T3S A42P V153F",3
"lib1","SARS-CoV-2","GGAACACATAGTAACT",9,122.86,10.41,-0.36,0.07,2.8,1.03,0,">1 nonsynonymous","F44L D59K E154S",3
"lib1","SARS-CoV-2","GGAACACCTATTACGA",6,52.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A81V Y93P T100S G152R T170A T201V",6
"lib1","SARS-CoV-2","GGAACACCTGCTCTTG",1,34.91,8.56,-2.2,0.2,1.73,1.16,0.02,">1 nonsynonymous","C6F Y35L D98G Y178S",4
"lib1","SARS-CoV-2","GGAACACGCAGTCTAT",4,69.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y E135L G152V",3
"lib1","SARS-CoV-2","GGAACACTCCGCTATC",1,572.56,9.95,-0.82,0.08,2.32,1.03,0,"1 nonsynonymous","I28S",1
"lib1","SARS-CoV-2","GGAACACTCGTTATTC",6,137.91,10.49,-0.27,0.04,2.86,1.04,0,">1 nonsynonymous","R16I C61G P149S",3
"lib1","SARS-CoV-2","GGAACAGAGACATCCA",5,46.15,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10L A81T Y93G V173I",4
"lib1","SARS-CoV-2","GGAACAGAGATAAATC",5,0.22,NA,NA,NA,NA,NA,NA,"stop","C6* P96G V103N F126*",4
"lib1","SARS-CoV-2","GGAACAGCAAGATTAG",1,32.03,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","R25E C49A",2
"lib1","SARS-CoV-2","GGAACAGGACTCTGTT",4,60.82,10.75,-0.02,0.05,2.93,1.05,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","GGAACAGGGAAGTTCA",12,112.23,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2Q R25T C61Y F167Q",4
"lib1","SARS-CoV-2","GGAACAGTAGCAACAG",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A145M",2
"lib1","SARS-CoV-2","GGAACATAAGTTGAAA",2,26.48,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","Y143N V180A",2
"lib1","SARS-CoV-2","GGAACATATAGCTACC",7,68.75,10.33,-0.44,0.05,2.92,1.01,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","GGAACATCTCCCAAAC",11,116.82,10.68,-0.08,0.04,2.88,1.06,0,">1 nonsynonymous","Q84T N110K G152S",3
"lib1","SARS-CoV-2","GGAACATCTTAAACTT",1,6.67,10.15,-0.61,0.04,2.9,1.04,0,">1 nonsynonymous","P54S D90F",2
"lib1","SARS-CoV-2","GGAACCAAAGTGACTA",6,81.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R124D P177I",2
"lib1","SARS-CoV-2","GGAACCACCAAAATTA",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L S45Y C49D R136L V173L",5
"lib1","SARS-CoV-2","GGAACCACCACAATCC",10,87.05,8.9,-1.87,0.09,1.96,1.08,0,">1 nonsynonymous","C49L F156R",2
"lib1","SARS-CoV-2","GGAACCAGGAAAAACT",5,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21G D112C",2
"lib1","SARS-CoV-2","GGAACCAGGCATCCAT",3,75.72,9.47,-1.29,0.13,1.7,1.11,0.01,">1 nonsynonymous","A18T K128G S139Q S184L T201K",5
"lib1","SARS-CoV-2","GGAACCATACCCAGCG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N30E K94V I104A G116L P133*",5
"lib1","SARS-CoV-2","GGAACCATAGCCCTTA",2,21.05,9.36,-1.4,0.12,2.09,1.19,0.01,">1 nonsynonymous","I2S Q84F Y91V",3
"lib1","SARS-CoV-2","GGAACCCATATTAGAA",1,16.62,10.4,-0.36,0.15,2.76,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGAACCCGAACGCACA",2,0,NA,NA,NA,NA,NA,NA,"stop","L38N C49* Q84R I104S N107P N171S K198R",7
"lib1","SARS-CoV-2","GGAACCCGATAGGCCT",1,29.46,6.09,-4.68,0.45,1.64,1.15,0.01,">1 nonsynonymous","Y35T L57N L95T P149E E154C",5
"lib1","SARS-CoV-2","GGAACCCTAGAAATCG",2,49.43,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L60W D68V I104M S113M E154H Y165I",6
"lib1","SARS-CoV-2","GGAACCCTTTAAAATG",2,0.83,NA,NA,NA,NA,NA,NA,"stop","Y35* D97*",2
"lib1","SARS-CoV-2","GGAACCCTTTATCCCA",7,52.36,10.17,-0.6,0.04,2.89,1.02,0,">1 nonsynonymous","K132N Y178C",2
"lib1","SARS-CoV-2","GGAACCGAATCTAGGT",6,153.73,10.5,-0.27,0.04,2.91,1.02,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","GGAACCGCGACCGACA",2,62.51,10.61,-0.15,0.08,2.82,1.08,0,">1 nonsynonymous","N1E D97A K132G",3
"lib1","SARS-CoV-2","GGAACCGCTTGCAACA",2,59.29,10.25,-0.51,0.09,2.5,1,0,">1 nonsynonymous","T85Y D98L",2
"lib1","SARS-CoV-2","GGAACCGTGAACGCAC",3,1.17,NA,NA,NA,NA,NA,NA,"stop","V11F V37* D59A I72R N92L V103E P149I G172A V181D",9
"lib1","SARS-CoV-2","GGAACCTCATAAATCA",1,19.05,11.02,0.25,0.12,2.91,1,0,">1 nonsynonymous","T55L L122R",2
"lib1","SARS-CoV-2","GGAACCTGGCCAAAAT",4,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R T15N D98L G117I",4
"lib1","SARS-CoV-2","GGAACCTGTACGACAA",1,19.67,9.7,-1.06,0.15,1.71,1.05,0.01,">1 nonsynonymous","G9I A14S L122I E141C",4
"lib1","SARS-CoV-2","GGAACCTTAAAGATAC",7,28.86,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N4C Y39T C49S F99G",4
"lib1","SARS-CoV-2","GGAACCTTTAAAGACC",3,2.67,NA,NA,NA,NA,NA,NA,"stop","G9A A42D D59* D90G L122V R127L",6
"lib1","SARS-CoV-2","GGAACGACAAATAGAA",5,19.47,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F12P D90Q C102V C150D G155M",5
"lib1","SARS-CoV-2","GGAACGACTGAAACTG",10,51.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K56P C150K F160V",3
"lib1","SARS-CoV-2","GGAACGACTTAGTTCA",1,37.22,9.75,-1.01,0.1,2.66,1.07,0,">1 nonsynonymous","G9Q Q79R",2
"lib1","SARS-CoV-2","GGAACGAGCCCTCCGC",5,5.29,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14D D34M G86T A89S T100M G117W",6
"lib1","SARS-CoV-2","GGAACGCATGCTTTCA",6,71.96,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E10F Y50S V115D",3
"lib1","SARS-CoV-2","GGAACGCCCACCATAT",5,48.89,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N58Y K94A A105S E135Y E154S P177R",6
"lib1","SARS-CoV-2","GGAACGCCCTCCACGA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","I142V P149*",2
"lib1","SARS-CoV-2","GGAACGCCTCTCAAAT",2,9.39,10.27,-0.49,0.09,2.91,1.09,0,">1 nonsynonymous","Y91F G116E S200K",3
"lib1","SARS-CoV-2","GGAACGGACTCTCTCA",2,25.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G74V L95E L122E K128S",4
"lib1","SARS-CoV-2","GGAACGGCACTAATCC",1,26.73,9.69,-1.08,0.13,2.59,1.02,0.01,">1 nonsynonymous","Y35I N58F L122E K128P G152L",5
"lib1","SARS-CoV-2","GGAACGGGATAACACA",1,122.69,10.78,0.02,0.05,2.97,1,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","GGAACTAACAGGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","V52W T85*",2
"lib1","SARS-CoV-2","GGAACTAAGAACTAGA",9,62.59,10.84,0.07,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAACTAATAACTCAG",11,223.81,10.75,-0.01,0.06,2.85,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAACTAATGCAAATA",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L A42L F160R",3
"lib1","SARS-CoV-2","GGAACTACGGAGGCAA",1,32.43,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T63C R179S",2
"lib1","SARS-CoV-2","GGAACTAGATATACTA",1,44.65,9.3,-1.46,0.15,1.5,1.16,0.01,">1 nonsynonymous","R25E V37L",2
"lib1","SARS-CoV-2","GGAACTCAATAGGAAT",1,16.07,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D59S A105P",2
"lib1","SARS-CoV-2","GGAACTCACACAAGGG",1,10.07,6,-4.76,2,3,1.14,0.02,">1 nonsynonymous","D34N Y119T L131H S139N Q168I",5
"lib1","SARS-CoV-2","GGAACTCATAAACGAT",4,10.04,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","Y50L E141M",2
"lib1","SARS-CoV-2","GGAACTCGTTGGTATA",15,352.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44T K56L F99G",3
"lib1","SARS-CoV-2","GGAACTCTAAAAACCA",3,52.28,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N64G R73S W106E",3
"lib1","SARS-CoV-2","GGAACTCTCATCTTAC",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H P149F P161T",3
"lib1","SARS-CoV-2","GGAACTCTGTTAAGTT",1,13.34,8.39,-2.38,0.13,1.75,1.06,0.01,">1 nonsynonymous","N118D R124K",2
"lib1","SARS-CoV-2","GGAACTCTTTTGTCAT",9,156.36,10.18,-0.58,0.05,2.92,1,0,"1 nonsynonymous","A33K",1
"lib1","SARS-CoV-2","GGAACTGAAGTTACAA",5,171.68,10.78,0.01,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAACTGAATAACGAC",1,9.16,10.69,-0.07,0.11,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAACTGACAGAGCCG",3,9.59,8.16,-2.61,0.6,1.5,1,0.04,">1 nonsynonymous","D34H C49D Y119R S200E",4
"lib1","SARS-CoV-2","GGAACTGCCTACTCAT",1,30.98,6.27,-4.49,0.53,1.5,1.1,0.01,">1 nonsynonymous","A14V Y21R G86W L122I",4
"lib1","SARS-CoV-2","GGAACTGCTGTGTGGT",3,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102S K114V T170Y",3
"lib1","SARS-CoV-2","GGAACTGGTGGCACTA",4,55.24,10.56,-0.2,0.04,2.95,1,0,"1 nonsynonymous","Y66C",1
"lib1","SARS-CoV-2","GGAACTGTTACTCTCA",1,9.52,9.15,-1.61,0.27,2.69,1,0.03,">1 nonsynonymous","F12I V32N N157E",3
"lib1","SARS-CoV-2","GGAACTTAAACATTAT",6,97.5,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35F G116L P161R",3
"lib1","SARS-CoV-2","GGAACTTAGACAGAAG",15,5.18,NA,NA,NA,NA,NA,NA,"stop","A14Y G83R G86* W106C",4
"lib1","SARS-CoV-2","GGAACTTATTAGATAA",1,29.64,9.64,-1.12,0.21,1.78,1.1,0.01,"1 nonsynonymous","D68T",1
"lib1","SARS-CoV-2","GGAACTTGAGACTGAC",3,10.77,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","C6S K87R Y119P F126L C150L",5
"lib1","SARS-CoV-2","GGAACTTGAGTACAAG",6,131.55,10.64,-0.12,0.08,2.88,1.08,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","GGAACTTGTAAAGCAC",15,343.1,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33P A42R L57G D90H S129R Y175E",6
"lib1","SARS-CoV-2","GGAACTTTCTTCTCAA",5,52.3,9.09,-1.67,0.23,1.5,1.19,0.02,"1 nonsynonymous","W23T",1
"lib1","SARS-CoV-2","GGAACTTTTAAAACAA",2,12.78,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N64S P96N C150S G174V",4
"lib1","SARS-CoV-2","GGAAGAAAACACGAAC",2,142.13,10.41,-0.36,0.04,2.81,1,0,">1 nonsynonymous","T55L R136S",2
"lib1","SARS-CoV-2","GGAAGAAACCGAATAA",4,12.12,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5V S41V T46M N92L A145Y C158Y Y175R S184H T201M",9
"lib1","SARS-CoV-2","GGAAGAAACTACTAAA",1,11.53,6.2,-4.57,0.9,1.5,1.03,0.05,">1 nonsynonymous","A14S Y39T G86K C158F",4
"lib1","SARS-CoV-2","GGAAGAAATATAAAAA",3,75.95,10.59,-0.18,0.03,2.94,1.01,0,">1 nonsynonymous","K128L P149D S200H",3
"lib1","SARS-CoV-2","GGAAGAAATCTTTCAC",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S A81V G101A K114L",4
"lib1","SARS-CoV-2","GGAAGAATGAAGGTGC",17,269.73,10.69,-0.07,0.07,2.83,1.09,0,">1 nonsynonymous","R27K L60C",2
"lib1","SARS-CoV-2","GGAAGACCCGAGGTGA",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C F99R T140A T201L",4
"lib1","SARS-CoV-2","GGAAGACTTTTAAGAT",5,43.43,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36K G83C I88K L95Y F99M G146S G152M N171S",8
"lib1","SARS-CoV-2","GGAAGAGAACATGGCA",3,56.98,10.68,-0.08,0.04,2.95,1.01,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","GGAAGATATGAAATCA",1,48.35,10.62,-0.15,0.03,2.92,1.03,0,"1 nonsynonymous","G116A",1
"lib1","SARS-CoV-2","GGAAGATGATAGACTA",5,28.82,6,-4.76,1.23,2.42,1.26,0.01,">1 nonsynonymous","G9E D68W V103P I138L C158D",5
"lib1","SARS-CoV-2","GGAAGATTGCAACTTG",5,25.48,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G9C D34I S129C F134D G152V A190P",6
"lib1","SARS-CoV-2","GGAAGCAAACGACATA",6,59.66,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8P F44N Y66W L122V P169I",5
"lib1","SARS-CoV-2","GGAAGCAACGCTATGA",8,0.27,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib1","SARS-CoV-2","GGAAGCAAGAAAGTTT",2,57.15,9.73,-1.04,0.07,2.8,1.12,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","GGAAGCACCCTTTAAC",10,171.32,10.68,-0.09,0.07,2.92,1.04,0,"1 nonsynonymous","I138K",1
"lib1","SARS-CoV-2","GGAAGCAGTAGAAAAC",2,5.57,6,-4.76,2,3,1.06,0,">1 nonsynonymous","C31R P133C F156V",3
"lib1","SARS-CoV-2","GGAAGCATAAAATATA",4,81.18,10.18,-0.58,0.06,2.61,1.02,0,">1 nonsynonymous","P7H R16V R136L",3
"lib1","SARS-CoV-2","GGAAGCATCCTATATA",5,8.97,9.97,-0.8,0.18,2.34,1.08,0.02,">1 nonsynonymous","F185T T201P",2
"lib1","SARS-CoV-2","GGAAGCCACTGGGCAT",8,75.5,10.72,-0.05,0.05,2.91,1.05,0,"1 nonsynonymous","G196L",1
"lib1","SARS-CoV-2","GGAAGCCATAAAAAAA",5,70.79,10.77,0.01,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAGCCCGCTGCCGG",2,17.8,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D34A F134Y E154Y Y165R",4
"lib1","SARS-CoV-2","GGAAGCCTACAGCAAA",7,86.03,10.76,-0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAGCGAATCTCCTA",1,23.28,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y66P Y91G N130Q",3
"lib1","SARS-CoV-2","GGAAGCTAAACACTTA",5,34.49,10.18,-0.59,0.11,2.54,1.06,0.01,">1 nonsynonymous","Q84G F99L",2
"lib1","SARS-CoV-2","GGAAGCTAAGCATCAT",1,18.76,6.69,-4.07,0.61,1.5,1,0.05,">1 nonsynonymous","D75R A89I Q144V F156W G172W",5
"lib1","SARS-CoV-2","GGAAGCTAATCAGCTT",7,190.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61Q Q84H G86Y V182F",4
"lib1","SARS-CoV-2","GGAAGCTGCGATAGGG",9,27.31,6.27,-4.49,0.65,1.5,1.12,0.03,">1 nonsynonymous","G9L A33T R73V",3
"lib1","SARS-CoV-2","GGAAGCTTTGCATCGA",5,195.36,9.14,-1.63,0.05,2.76,1.12,0,">1 nonsynonymous","Y119E P149L",2
"lib1","SARS-CoV-2","GGAAGGAATAATTCGT",3,29.97,10.05,-0.72,0.1,2.05,1,0.01,">1 nonsynonymous","P96R N151A",2
"lib1","SARS-CoV-2","GGAAGGAATTTTAACC",2,21.42,7.2,-3.57,0.61,1.5,1,0.07,">1 nonsynonymous","N4A S41M L57P S113K S129T R136S",6
"lib1","SARS-CoV-2","GGAAGGACAGACAAAC",3,39.51,6.39,-4.37,0.59,1.5,1.11,0.03,">1 nonsynonymous","F44S A89S V103P N107W N120V",5
"lib1","SARS-CoV-2","GGAAGGATACGAGTTA",3,34.97,10.43,-0.33,0.06,2.93,1,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","GGAAGGCTAGCCTTCG",5,53.23,7.88,-2.88,0.13,1.74,1.14,0,">1 nonsynonymous","K26L F167L",2
"lib1","SARS-CoV-2","GGAAGGCTTTTATAAA",5,52.81,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F44M Q84N N109H N157S",4
"lib1","SARS-CoV-2","GGAAGGCTTTTGCAAG",18,441.93,10.72,-0.04,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAGGGTTAGATTGA",1,38.16,10.29,-0.48,0.04,2.94,1.05,0,">1 nonsynonymous","K87V K132R Q144K",3
"lib1","SARS-CoV-2","GGAAGGTAAGATGAAC",3,0.54,NA,NA,NA,NA,NA,NA,"stop","Y50V V103* V115D Y121S D137E Q176M",6
"lib1","SARS-CoV-2","GGAAGGTTCCGATAAA",8,126.26,10.83,0.07,0.07,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAAGGTTTGTTTGAC",5,91.34,10.69,-0.07,0.06,2.91,1.05,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","GGAAGTAAATACCAAA",3,13.44,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F134L G172T",2
"lib1","SARS-CoV-2","GGAAGTAACATATACA",2,6.69,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P96E W106F L131H I142N P149L V182A",6
"lib1","SARS-CoV-2","GGAAGTAATGGACCGT",1,23.41,10.71,-0.05,0.07,2.88,1.05,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","GGAAGTAGAGGTCTTG",11,56.26,7.58,-3.19,0.21,1.5,1.13,0.01,">1 nonsynonymous","E10L F167L",2
"lib1","SARS-CoV-2","GGAAGTATAGACGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R25S I104* S113V N118H",4
"lib1","SARS-CoV-2","GGAAGTATAGGAACAC",10,9.03,NA,NA,NA,NA,NA,NA,"stop","R27* Y119W S129N T140C",4
"lib1","SARS-CoV-2","GGAAGTCAAAATGCCT",6,158.93,10.81,0.05,0.07,2.95,1.03,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","GGAAGTCACGCCCGTG",4,12.15,9.85,-0.92,0.11,2.65,1.04,0.01,">1 nonsynonymous","P133F Q168S",2
"lib1","SARS-CoV-2","GGAAGTGGATTGAAAA",17,266.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D34L R78D N107G N110D V180F",5
"lib1","SARS-CoV-2","GGAATAAAAGAGAATG",8,24.52,7.3,-3.47,0.37,1.5,1.17,0.05,">1 nonsynonymous","I2D F99I D112C",3
"lib1","SARS-CoV-2","GGAATAAAATAATCGA",1,5.98,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S69R Q84L K114M V173T",4
"lib1","SARS-CoV-2","GGAATAAACTTGAATT",15,129.22,10.77,0,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATAAAGGCTAGAG",12,143.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4L G86V L131C",3
"lib1","SARS-CoV-2","GGAATAAAGTTAATTT",1,6.58,10.45,-0.32,0.03,3,1,0,">1 nonsynonymous","G9F N120F Y143F",3
"lib1","SARS-CoV-2","GGAATAAATAATGTAC",4,111.51,10.5,-0.27,0.07,2.76,1.1,0,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","GGAATAAATAGTCAGT",1,17.59,7.8,-2.96,0.27,1.5,1.1,0.02,">1 nonsynonymous","G83K S139P",2
"lib1","SARS-CoV-2","GGAATAAATGCTGTAT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","I2L C61R D75N P82* V103A",5
"lib1","SARS-CoV-2","GGAATAACAGAAGGTC",6,30.25,9.05,-1.71,0.26,1.5,1.07,0.03,">1 nonsynonymous","N40P V103T",2
"lib1","SARS-CoV-2","GGAATAACTAAGATGG",2,12.32,10.38,-0.39,0.08,3,1,0,">1 nonsynonymous","S36L G116K",2
"lib1","SARS-CoV-2","GGAATAAGACGTTACC",3,35.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68Y K87R G146V",3
"lib1","SARS-CoV-2","GGAATAAGGAGGACTA",6,77.08,9.97,-0.8,0.12,2.38,1.03,0.01,"1 nonsynonymous","Q84W",1
"lib1","SARS-CoV-2","GGAATAAGTAACCGAA",6,247.91,10.78,0.02,0.06,2.83,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATAAGTTGTCATA",3,18.46,6,-4.76,1.49,1.5,1.11,0.01,">1 nonsynonymous","A18N P96L G152S T201V",4
"lib1","SARS-CoV-2","GGAATAATAGGTAATG",1,29.52,10.88,0.12,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATAATGTCATATG",3,123.18,10.7,-0.06,0.06,2.88,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATACAATTTATTG",3,44.24,10.29,-0.48,0.06,2.63,1,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","GGAATACACACTTTAC",1,62.98,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V37S T46H P96L T148S V153L Q168G",6
"lib1","SARS-CoV-2","GGAATACAGATTTTGA",1,32.02,8.19,-2.57,0.14,1.55,1.13,0.01,">1 nonsynonymous","K26A G83T Y119W",3
"lib1","SARS-CoV-2","GGAATACAGTAGCCCC",1,2.75,NA,NA,NA,NA,NA,NA,"stop","K26* V37R D97K",3
"lib1","SARS-CoV-2","GGAATACATGCTTATG",3,102.44,7.76,-3,0.14,2.37,1.14,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","GGAATACCCAAGAAGC",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S D90F P96I",3
"lib1","SARS-CoV-2","GGAATACGGCTTAGTT",5,112.04,10.67,-0.1,0.06,2.87,1.08,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","GGAATACTACGATAGA",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P D98S",2
"lib1","SARS-CoV-2","GGAATAGAATTATGAA",10,33.2,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A33N F70R K128M S147P",4
"lib1","SARS-CoV-2","GGAATAGACCATTACA",4,49.76,9.06,-1.71,0.1,2.03,1.12,0,">1 nonsynonymous","F44R R73T",2
"lib1","SARS-CoV-2","GGAATAGCCTTATACT",5,146.83,10.69,-0.08,0.03,2.94,1.02,0,">1 nonsynonymous","N64V V173H",2
"lib1","SARS-CoV-2","GGAATAGGATCACCAT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64T V153E Y165S",3
"lib1","SARS-CoV-2","GGAATAGGCAGCAAGC",6,133.58,10.63,-0.14,0.04,2.92,1.03,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","GGAATAGGGGGCCCTT",10,199.55,10.76,-0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATAGGTTTATCAG",1,21.77,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F47L R124T",2
"lib1","SARS-CoV-2","GGAATATAACACCCCC",5,36.71,6,-4.76,1.41,1.5,1.19,0.03,">1 nonsynonymous","N4F Y66G P96T N157S",4
"lib1","SARS-CoV-2","GGAATATAACCAATTC",6,9.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40L K48T K94L N107I Y123F P133K Q163H Y175D",8
"lib1","SARS-CoV-2","GGAATATAATAGATTA",2,16.36,10.05,-0.71,0.19,1.78,1.02,0.01,">1 nonsynonymous","T3A A18M P133S",3
"lib1","SARS-CoV-2","GGAATATACCTCCACA",6,144.65,10.76,-0.01,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATATAGACATTTT",1,36.09,10.59,-0.17,0.04,2.92,1,0,">1 nonsynonymous","S53P N64G",2
"lib1","SARS-CoV-2","GGAATATCTAATAGAT",1,21.78,10.42,-0.34,0.06,2.96,1,0,">1 nonsynonymous","A22M T63L",2
"lib1","SARS-CoV-2","GGAATATGAGAGCCCG",7,40.17,6,-4.76,0.59,1.5,1.17,0.01,">1 nonsynonymous","P82H K114N P169C",3
"lib1","SARS-CoV-2","GGAATATGATTCTCAA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99A S129Y C158P F167T",4
"lib1","SARS-CoV-2","GGAATATGCAACACAT",1,0.66,NA,NA,NA,NA,NA,NA,"stop","C61* P82R P133H",3
"lib1","SARS-CoV-2","GGAATATGCCTCAGAA",3,0.83,NA,NA,NA,NA,NA,NA,"stop","A14* A89T F134G",3
"lib1","SARS-CoV-2","GGAATATGCCTGAACT",1,59.63,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V11M S43I A105I Y119F Y175A",5
"lib1","SARS-CoV-2","GGAATATTAAATCCTG",3,83,10.12,-0.64,0.05,2.88,1.03,0,">1 nonsynonymous","Y35S V115D",2
"lib1","SARS-CoV-2","GGAATATTAACAACAA",8,106.07,9.88,-0.88,0.08,2.53,1.04,0,">1 nonsynonymous","T15Y S129I",2
"lib1","SARS-CoV-2","GGAATATTCGAAGGAA",3,29.76,10.71,-0.06,0.06,2.99,1,0,">1 nonsynonymous","I2Q S36E N120V T201M",4
"lib1","SARS-CoV-2","GGAATCACACCGAGAA",1,48.75,10.74,-0.02,0.05,2.95,1,0,">1 nonsynonymous","F44Y P149L",2
"lib1","SARS-CoV-2","GGAATCACTGACTAAA",1,16.68,10.75,-0.01,0.09,2.89,1.08,0,">1 nonsynonymous","K56M C61R",2
"lib1","SARS-CoV-2","GGAATCAGTATTTTAA",3,25.13,6,-4.76,0.68,1.74,1.11,0.01,">1 nonsynonymous","I2V T85I D97F G117R R136S",5
"lib1","SARS-CoV-2","GGAATCATGTCCTAGA",1,0.64,NA,NA,NA,NA,NA,NA,"stop","Y119* T148D",2
"lib1","SARS-CoV-2","GGAATCATGTGAAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37C D98K",2
"lib1","SARS-CoV-2","GGAATCATTAGAGGAG",1,0.75,NA,NA,NA,NA,NA,NA,"stop","Y35S K87N K94G K114*",4
"lib1","SARS-CoV-2","GGAATCCAAGATGTGA",2,57.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44C S139P",2
"lib1","SARS-CoV-2","GGAATCCATGGAGAAA",1,108.52,8.88,-1.89,0.15,1.76,1.09,0.01,">1 nonsynonymous","C31F G116A K128L",3
"lib1","SARS-CoV-2","GGAATCCATTGACCAC",7,50.95,10.81,0.05,0.07,2.99,1,0,">1 nonsynonymous","V37M D97L",2
"lib1","SARS-CoV-2","GGAATCCGAGTCGTTG",3,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8C S41Q D90Q N109R",4
"lib1","SARS-CoV-2","GGAATCCGTTTCGTGC",6,56.72,7.41,-3.35,0.21,1.5,1.17,0.01,">1 nonsynonymous","I2V V65N A145C",3
"lib1","SARS-CoV-2","GGAATCCTATGACGCT",13,235.88,10.76,0,0.04,2.91,1.05,0,"1 nonsynonymous","F160G",1
"lib1","SARS-CoV-2","GGAATCGAGCAGTAAG",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I N92E V173F",3
"lib1","SARS-CoV-2","GGAATCGCATTTAAAG",5,31.54,10.64,-0.13,0.09,2.85,1.1,0,">1 nonsynonymous","Y39G A42D",2
"lib1","SARS-CoV-2","GGAATCTACCAGTAGA",2,11.6,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L57G V77T P149N F160C",4
"lib1","SARS-CoV-2","GGAATCTCGTAAACAA",3,28,6.08,-4.68,0.96,1.5,1.11,0.01,">1 nonsynonymous","F8W S45F K94Y T100Y V115E P149R E154D",7
"lib1","SARS-CoV-2","GGAATCTTGAAAGTTT",2,39.98,10.68,-0.08,0.08,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAATGAACCAAGTGT",6,24.44,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F99Q Y123C E135P K199C",4
"lib1","SARS-CoV-2","GGAATGACGGCGAATC",1,26.37,10.07,-0.69,0.14,2.19,1.12,0.01,">1 nonsynonymous","D98A S184E",2
"lib1","SARS-CoV-2","GGAATGACTATACTGG",6,68.84,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","V37A L95Y",2
"lib1","SARS-CoV-2","GGAATGAGAACAATCT",2,27.42,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G83N R179G",2
"lib1","SARS-CoV-2","GGAATGATATTCCGCA",1,28.87,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","I2W A18K R27W L60T N107S N120R T140K P161G",8
"lib1","SARS-CoV-2","GGAATGATTTCAGATC",10,281.53,9.71,-1.06,0.08,2.39,1.08,0,">1 nonsynonymous","D90L I142L G152L",3
"lib1","SARS-CoV-2","GGAATGCACAACCTGC",3,32.02,9.94,-0.83,0.08,2.8,1.02,0,">1 nonsynonymous","N4E S147C F160I",3
"lib1","SARS-CoV-2","GGAATGCAGAAGATAT",12,140.05,8.63,-2.13,0.14,1.6,1.18,0.01,">1 nonsynonymous","E10M E141I G155L",3
"lib1","SARS-CoV-2","GGAATGCAGTACGCCC",3,34.36,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y21F F44L F99C S139N T201L",5
"lib1","SARS-CoV-2","GGAATGCAGTATACGG",1,23.18,10.63,-0.14,0.04,2.94,1.01,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","GGAATGCAGTTGCTTG",1,1.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","GGAATGCATGAACGTT",3,14.9,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Q84Y N92V",2
"lib1","SARS-CoV-2","GGAATGCCTCCGTAAC",2,77.81,10.82,0.06,0.07,2.94,1.01,0,">1 nonsynonymous","D90N N120L Q168H",3
"lib1","SARS-CoV-2","GGAATGCGGGACCATG",1,11.33,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49A T55V R124Q",3
"lib1","SARS-CoV-2","GGAATGCTTAACTTGC",1,11.68,10.08,-0.69,0.07,3,1,0,">1 nonsynonymous","N24K S45P I138S",3
"lib1","SARS-CoV-2","GGAATGGACCAGATGA",2,15.81,7.1,-3.67,0.34,1.65,1.08,0.02,">1 nonsynonymous","C31A T63L F99K",3
"lib1","SARS-CoV-2","GGAATGGACTTAAGAC",4,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A S129Y F185S",3
"lib1","SARS-CoV-2","GGAATGGATCACCGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F8* I28G K128F F167R",4
"lib1","SARS-CoV-2","GGAATGGCAGTTCCTT",3,34.12,6,-4.76,2,3,1.27,0,">1 nonsynonymous","C31M S41F Q84S L95P K132I C150S",6
"lib1","SARS-CoV-2","GGAATGGCATATGAGC",3,85.65,10.83,0.06,0.07,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAATGGCCAAATCAT",5,96.81,10.42,-0.35,0.05,2.88,1.04,0,">1 nonsynonymous","F44K L111Q",2
"lib1","SARS-CoV-2","GGAATGTCATACAAAA",5,3.07,NA,NA,NA,NA,NA,NA,"stop","Y39S N64T D90A L95D R127K G146*",6
"lib1","SARS-CoV-2","GGAATGTTCTTGTTCT",5,44.82,9.65,-1.12,0.12,2.07,1.09,0.01,">1 nonsynonymous","R136D L187S",2
"lib1","SARS-CoV-2","GGAATTAAACCTGACA",6,4.69,NA,NA,NA,NA,NA,NA,"stop","V37* C158R",2
"lib1","SARS-CoV-2","GGAATTAAACCTGCCT",4,32.96,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S41L Y91L F167E P197S",4
"lib1","SARS-CoV-2","GGAATTAAATAATCAG",4,116.41,10.01,-0.76,0.07,2.53,1.05,0,">1 nonsynonymous","L57M V77M",2
"lib1","SARS-CoV-2","GGAATTAAATGACCAC",2,43.78,10.19,-0.57,0.12,2.44,1.02,0.01,"1 nonsynonymous","R25S",1
"lib1","SARS-CoV-2","GGAATTAAGCAATAAA",2,0.37,NA,NA,NA,NA,NA,NA,"stop","N4I T15* Y35M N151F",4
"lib1","SARS-CoV-2","GGAATTAAGGAATTTG",1,50.86,10.61,-0.16,0.12,2.87,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGAATTACAAAACCTA",3,32.37,7.93,-2.83,0.13,2.11,1.17,0.01,">1 nonsynonymous","Y121H Q176E",2
"lib1","SARS-CoV-2","GGAATTACCTAGGCCA",2,173.19,10.22,-0.54,0.05,2.8,1.02,0,">1 nonsynonymous","S36L Y178T",2
"lib1","SARS-CoV-2","GGAATTACGAAGCATC",3,9.34,8.27,-2.49,0.25,1.75,1.12,0.03,">1 nonsynonymous","V11Y C61N G86D",3
"lib1","SARS-CoV-2","GGAATTACTTGGTAAG",2,17.24,10.13,-0.64,0.08,2.68,1,0,">1 nonsynonymous","G9E D98G Y123S K128Y",4
"lib1","SARS-CoV-2","GGAATTATAACGAAAC",1,14.96,8.07,-2.69,0.31,1.62,1.07,0.04,"1 nonsynonymous","F167H",1
"lib1","SARS-CoV-2","GGAATTATAATCACCT",7,71.64,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C6I A14I V77K C158V",4
"lib1","SARS-CoV-2","GGAATTATATGAAGTT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","GGAATTATCATATAGG",2,0.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22S",1
"lib1","SARS-CoV-2","GGAATTCAAATAACGA",16,67.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S43M G83S L95P V103L",4
"lib1","SARS-CoV-2","GGAATTCAGACTCGCA",15,136.62,6,-4.76,2,1.5,1.2,0,">1 nonsynonymous","Y35R Q84G V103P F156S",4
"lib1","SARS-CoV-2","GGAATTCCAATCCAGG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","S19* S113I S200K",3
"lib1","SARS-CoV-2","GGAATTCCTGTAAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* Y123* G172M",3
"lib1","SARS-CoV-2","GGAATTCGTTAATCCA",2,17.88,9.18,-1.59,0.3,1.5,1,0.06,">1 nonsynonymous","S19T D98Y A105S",3
"lib1","SARS-CoV-2","GGAATTCTATTTCAAC",2,54.05,10.02,-0.75,0.07,2.82,1,0,">1 nonsynonymous","T15I G116S",2
"lib1","SARS-CoV-2","GGAATTCTGGCATCCG",6,33.76,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9T I88M L95W F156T",4
"lib1","SARS-CoV-2","GGAATTGCATGCAAAA",2,5.82,8.23,-2.54,0.38,1.57,1.04,0.03,">1 nonsynonymous","L5G A22T V37L S41N D90V D97K",6
"lib1","SARS-CoV-2","GGAATTGCGAATAGTC",6,80.53,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N58S Y91G G101L R124P S200Y",5
"lib1","SARS-CoV-2","GGAATTGGATAGGGCG",12,139.58,9.86,-0.9,0.05,2.78,1.05,0,">1 nonsynonymous","F160L P169I",2
"lib1","SARS-CoV-2","GGAATTGTACGATAAA",2,20.25,10.49,-0.28,0.1,2.83,1.03,0,">1 nonsynonymous","V103I G152R",2
"lib1","SARS-CoV-2","GGAATTGTACTTCTGA",3,14.82,10.69,-0.08,0.05,2.97,1.02,0,">1 nonsynonymous","G152S S200H",2
"lib1","SARS-CoV-2","GGAATTTAAAATGTAG",3,25.14,8.11,-2.65,0.35,1.5,1.06,0.03,">1 nonsynonymous","I88R F99S S113Y C158K T201S",5
"lib1","SARS-CoV-2","GGAATTTATAATACGT",2,0.47,NA,NA,NA,NA,NA,NA,"stop","Y119* C150L G155S S200M",4
"lib1","SARS-CoV-2","GGAATTTCGCCGGCGA",4,79.85,10.77,0.01,0.05,2.93,1.05,0,">1 nonsynonymous","F44D N130K",2
"lib1","SARS-CoV-2","GGAATTTCGTTAATTT",6,78.86,10.7,-0.06,0.1,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAATTTCTCAATTTT",5,43.15,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","N92W",1
"lib1","SARS-CoV-2","GGAATTTGAAATAACA",7,2.2,NA,NA,NA,NA,NA,NA,"stop","Y39* L57C N107P",3
"lib1","SARS-CoV-2","GGAATTTTGTATACTG",1,6.68,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","Y50D F62G E141R G172D",4
"lib1","SARS-CoV-2","GGACAAAAACCTCACC",5,28.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T15R R27L T140R C158V",4
"lib1","SARS-CoV-2","GGACAAAAGAGAGGAG",12,105.25,6.59,-4.17,0.35,1.5,1.18,0.01,">1 nonsynonymous","A81T Q84K T100H G116L E154L",5
"lib1","SARS-CoV-2","GGACAAAAGGACACCT",4,33.45,10.74,-0.03,0.05,2.96,1,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","GGACAAAATACACAAT",3,25.93,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A14I C158N",2
"lib1","SARS-CoV-2","GGACAAAATGCAATTT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T3A S108* L122W T148I",4
"lib1","SARS-CoV-2","GGACAAACACACAGAC",3,35.15,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","N151F C158L P177C",3
"lib1","SARS-CoV-2","GGACAAACACGGCTGA",1,34.69,8.99,-1.78,0.18,1.6,1.19,0.02,">1 nonsynonymous","S45F Y123V F160R P169R",4
"lib1","SARS-CoV-2","GGACAAACATGTTGAA",3,6.13,10.89,0.12,0.11,3,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACAAACCCCTATAA",5,160.93,10.45,-0.31,0.04,2.87,1.05,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","GGACAAACCGCAGTCA",1,22.77,10.55,-0.22,0.06,2.98,1.01,0,">1 nonsynonymous","K87N S164Y",2
"lib1","SARS-CoV-2","GGACAAACCTGACGAA",2,52.31,9.63,-1.14,0.05,2.9,1.07,0,">1 nonsynonymous","F44S F126H",2
"lib1","SARS-CoV-2","GGACAAACTATCATGA",1,14.28,6.58,-4.18,0.43,1.5,1.1,0.03,">1 nonsynonymous","A14V Y50F Y119G Q168K",4
"lib1","SARS-CoV-2","GGACAAAGAACAATAG",5,61.04,8.87,-1.89,0.12,1.81,1.1,0.01,">1 nonsynonymous","D97Y N107V",2
"lib1","SARS-CoV-2","GGACAAAGACAGGATG",4,37.77,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","G9C Y39D G86C",3
"lib1","SARS-CoV-2","GGACAAAGATGCTATT",5,72.14,10.09,-0.67,0.11,2.47,1.01,0,">1 nonsynonymous","D97S S139Y",2
"lib1","SARS-CoV-2","GGACAAATAAATACGA",4,54.17,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10T A67L A81S N107D S139H",5
"lib1","SARS-CoV-2","GGACAAATATCATTTT",11,2.22,NA,NA,NA,NA,NA,NA,"stop","S41T K94T Y165K S200*",4
"lib1","SARS-CoV-2","GGACAAATCATCCGTT",3,5.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L C102R S129V G155D",4
"lib1","SARS-CoV-2","GGACAAATGACTAGTT",10,33.42,9.86,-0.9,0.13,2.2,1.02,0.01,">1 nonsynonymous","T3L T15G T100A",3
"lib1","SARS-CoV-2","GGACAACACACCGCAA",6,2.35,NA,NA,NA,NA,NA,NA,"stop","K56W A81L K94V P133A E141*",5
"lib1","SARS-CoV-2","GGACAACATCAAAATG",4,41.51,6,-4.76,2,3,1.1,0,">1 nonsynonymous","N24P Y39C Y93K R127V T201M",5
"lib1","SARS-CoV-2","GGACAACCACCGAGAG",1,15.46,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V11G K26M Y35P A89R",4
"lib1","SARS-CoV-2","GGACAACCGGCCGGAT",5,25.1,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","L5M F70W",2
"lib1","SARS-CoV-2","GGACAACCGTGAGGAT",2,53.02,10.78,0.02,0.09,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACAACGATAACATT",2,81.25,10.71,-0.06,0.07,2.8,1.16,0,"synonymous","",0
"lib1","SARS-CoV-2","GGACAACGTAGCGCCA",4,5.37,6.82,-3.94,0.8,3,1.08,0.02,">1 nonsynonymous","I2L C102R R179M",3
"lib1","SARS-CoV-2","GGACAACTAACCCGAG",1,73,9.43,-1.34,0.1,2.76,1.05,0,"1 nonsynonymous","G74M",1
"lib1","SARS-CoV-2","GGACAAGAAGGATATC",1,17.73,6.6,-4.16,0.34,1.5,1.06,0.02,">1 nonsynonymous","F44I F70I P96I T100S",4
"lib1","SARS-CoV-2","GGACAAGATTTCCAGC",4,54.64,10.28,-0.48,0.04,2.9,1.01,0,">1 nonsynonymous","I2D S53F K132S",3
"lib1","SARS-CoV-2","GGACAAGCTAGTATGG",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M C49A",2
"lib1","SARS-CoV-2","GGACAAGGATTAAGGA",4,25.12,9.06,-1.71,0.13,2.69,1.14,0.01,">1 nonsynonymous","E10N E154F",2
"lib1","SARS-CoV-2","GGACAAGTGAGAGATG",2,0.14,NA,NA,NA,NA,NA,NA,"stop","I2V R73* P161A",3
"lib1","SARS-CoV-2","GGACAATAAAGCAGTT",6,100.99,10.47,-0.29,0.08,2.82,1.07,0,"1 nonsynonymous","T15H",1
"lib1","SARS-CoV-2","GGACAATAACTGTATT",4,181.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64P Y123A Y175L H189C",4
"lib1","SARS-CoV-2","GGACAATAAGCCGTTT",1,24.36,10.76,-0.01,0.09,2.93,1.04,0,">1 nonsynonymous","S53L C61W L122K P149T",4
"lib1","SARS-CoV-2","GGACAATAATACAACC",10,1.14,NA,NA,NA,NA,NA,NA,"stop","S29V S45* V52F",3
"lib1","SARS-CoV-2","GGACAATACATATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T A105L V115I L122G D137W G146Q V153I T170L",8
"lib1","SARS-CoV-2","GGACAATACATCTTTA",5,26.25,10.5,-0.27,0.06,2.91,1.06,0,">1 nonsynonymous","T46S E154N",2
"lib1","SARS-CoV-2","GGACAATATCACCTCT",1,12.51,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T55L A81K W106R C158L",4
"lib1","SARS-CoV-2","GGACAATCGCACAATG",5,86.76,10.12,-0.64,0.05,2.66,1.04,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","GGACAATGACCTACCG",6,28.65,8.72,-2.05,0.26,1.5,1.21,0.03,">1 nonsynonymous","F62M A89R",2
"lib1","SARS-CoV-2","GGACAATGAGAATCTG",14,183.57,9.77,-0.99,0.1,1.94,1.05,0,"1 nonsynonymous","F8N",1
"lib1","SARS-CoV-2","GGACAATGTGTTCAAG",15,183.52,10.54,-0.22,0.04,2.88,1.04,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","GGACAATTACGGCGAG",13,176.84,10.42,-0.34,0.04,2.92,1.01,0,"1 nonsynonymous","T170W",1
"lib1","SARS-CoV-2","GGACAATTCAGCATGA",11,54.39,7.81,-2.95,0.16,1.5,1.17,0.01,">1 nonsynonymous","N13L T55K I142R",3
"lib1","SARS-CoV-2","GGACAATTTACGTACA",4,35.05,7.01,-3.76,0.2,1.5,1.06,0.01,">1 nonsynonymous","K94N N107L",2
"lib1","SARS-CoV-2","GGACAATTTATTCATA",3,17.46,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","K56G T63Y G101F L122W N171S",5
"lib1","SARS-CoV-2","GGACAATTTCTGAGGA",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M P96L G117Y",3
"lib1","SARS-CoV-2","GGACACAACCACATGC",6,154.34,10.06,-0.7,0.08,2.24,1.02,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","GGACACAACGTTGGAG",8,66.14,10.8,0.04,0.08,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACACACAAAAAGAA",8,124.98,9.9,-0.86,0.09,2,1.05,0,">1 nonsynonymous","N13C Y39D",2
"lib1","SARS-CoV-2","GGACACACATACTTAG",3,43.67,8.66,-2.11,0.15,2.77,1.07,0.01,">1 nonsynonymous","D98L F126Y G155S",3
"lib1","SARS-CoV-2","GGACACACCCAACGGT",6,116.05,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D68R G116M P133L Y175L",4
"lib1","SARS-CoV-2","GGACACACCGCTTGCA",1,49.42,8.88,-1.88,0.11,2.84,1.12,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","GGACACACTATCAATC",4,1.36,NA,NA,NA,NA,NA,NA,"stop","P7S N30P D97* N109M S139*",5
"lib1","SARS-CoV-2","GGACACATAAATGTTC",1,14.99,8.56,-2.21,0.23,1.63,1.19,0.03,">1 nonsynonymous","L38T S139R T148S",3
"lib1","SARS-CoV-2","GGACACATAAATTTTT",1,2.24,NA,NA,NA,NA,NA,NA,"stop","A89C P96* Q176T",3
"lib1","SARS-CoV-2","GGACACATTCGGTTAA",2,7.43,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","N40R V103A R127V T201K",4
"lib1","SARS-CoV-2","GGACACCAAAAGCATA",17,158.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12S R27L E76K K87L R179W",5
"lib1","SARS-CoV-2","GGACACCAACGCGCTG",7,233.65,10.83,0.07,0.07,2.96,1.03,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","GGACACCAACTTCATT",4,88.76,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W106V Y143W V173G P177T",4
"lib1","SARS-CoV-2","GGACACCACATCCCCG",2,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69E Q84L V103P",3
"lib1","SARS-CoV-2","GGACACCATGAGTGTA",1,6.54,10.06,-0.71,0.24,2.58,1.01,0.02,">1 nonsynonymous","A42E K94M",2
"lib1","SARS-CoV-2","GGACACCCACCAAATT",3,44.83,10.74,-0.02,0.08,2.92,1.03,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","GGACACCCCAAAATGT",4,69.22,9.74,-1.02,0.15,1.83,1.12,0.01,">1 nonsynonymous","I2L N13I K128S",3
"lib1","SARS-CoV-2","GGACACCCCATGCACC",10,140.86,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y143Q F167A",2
"lib1","SARS-CoV-2","GGACACCCTCAGAAAT",3,17.16,10.6,-0.17,0.13,2.73,1.01,0.01,"1 nonsynonymous","R136M",1
"lib1","SARS-CoV-2","GGACACCGATTCGATG",3,0,NA,NA,NA,NA,NA,NA,"stop","T46* C61S R78P I88V I104G",5
"lib1","SARS-CoV-2","GGACACCGGGAATTGA",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I F99W Y121R P161T",4
"lib1","SARS-CoV-2","GGACACCGTACCACAA",5,72.16,10.8,0.03,0.05,2.98,1,0,">1 nonsynonymous","V32Q L122F T201A",3
"lib1","SARS-CoV-2","GGACACCGTATTACGG",2,9.94,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","C6E K94W R127S",3
"lib1","SARS-CoV-2","GGACACCTAGGTCGTC",5,95.96,10.66,-0.11,0.1,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACACCTCACGATAT",2,67.69,10.84,0.07,0.04,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACACCTGTCAGGCG",5,1.28,NA,NA,NA,NA,NA,NA,"stop","F44P Y175* L183G",3
"lib1","SARS-CoV-2","GGACACGAAATTCGGA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","Y39* Y143N",2
"lib1","SARS-CoV-2","GGACACGAATGTCGTC",3,57.94,10.11,-0.66,0.1,2.31,1.07,0,"1 nonsynonymous","C102V",1
"lib1","SARS-CoV-2","GGACACGACGAAACTA",1,48.62,10.55,-0.22,0.07,2.9,1.07,0,">1 nonsynonymous","S43A E186K",2
"lib1","SARS-CoV-2","GGACACGATCCACATT",3,24.08,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G86V N107L E141R",3
"lib1","SARS-CoV-2","GGACACGCACATAACT",4,33.01,9.77,-1,0.13,2.12,1.06,0.01,"1 nonsynonymous","L38N",1
"lib1","SARS-CoV-2","GGACACGCCGGAGGCC",7,14.89,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5C N13Y A81L",3
"lib1","SARS-CoV-2","GGACACGCGCACATTT",6,72.83,8.14,-2.63,0.16,1.89,1.14,0.01,">1 nonsynonymous","I104H N157Q",2
"lib1","SARS-CoV-2","GGACACGTTTTCGTAC",5,87.17,10.67,-0.09,0.05,2.98,1,0,">1 nonsynonymous","V37R I138C",2
"lib1","SARS-CoV-2","GGACACTAGTTGCAAC",8,180.48,10.38,-0.39,0.03,2.85,1.08,0,">1 nonsynonymous","T15N P149Q",2
"lib1","SARS-CoV-2","GGACACTCGGGGGCAA",6,38.37,6.27,-4.49,0.85,1.5,1.16,0.04,">1 nonsynonymous","G9R V37K A81Q F167W G172A",5
"lib1","SARS-CoV-2","GGACACTCGGGGTTGG",6,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44W F99N S113F",3
"lib1","SARS-CoV-2","GGACACTCTTGCCGAG",3,1.66,NA,NA,NA,NA,NA,NA,"stop","S129G R136D N151*",3
"lib1","SARS-CoV-2","GGACACTGATATGTCA",3,47.7,10.62,-0.14,0.08,2.91,1.08,0,">1 nonsynonymous","T15K L122R",2
"lib1","SARS-CoV-2","GGACAGAACTTCCCCG",8,28.34,8.17,-2.59,0.33,1.5,1.04,0.05,">1 nonsynonymous","K48N N58Q C102Y P149S",4
"lib1","SARS-CoV-2","GGACAGAAGAGGTTAA",6,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A F156S S164L S184L",4
"lib1","SARS-CoV-2","GGACAGAAGATCCATC",1,34.31,10.72,-0.04,0.07,2.9,1.03,0,"1 nonsynonymous","S41Q",1
"lib1","SARS-CoV-2","GGACAGATAGACGAGA",4,43.29,10.06,-0.7,0.06,2.86,1,0,">1 nonsynonymous","Y123R S129F K198C",3
"lib1","SARS-CoV-2","GGACAGATTGTGAATG",3,29.97,9.97,-0.79,0.1,2.81,1.01,0,">1 nonsynonymous","C61P P149F E154N",3
"lib1","SARS-CoV-2","GGACAGCATAACTGGG",2,3.41,NA,NA,NA,NA,NA,NA,"stop","N13S G83V D98* S147K Q176*",5
"lib1","SARS-CoV-2","GGACAGCGGGAATTAT",6,78.16,8.93,-1.83,0.04,2.81,1.11,0,">1 nonsynonymous","D90R A145K L187V",3
"lib1","SARS-CoV-2","GGACAGCTTGACGAAT",5,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98S Y143S",2
"lib1","SARS-CoV-2","GGACAGGCTTCATATT",1,7.08,8,-2.77,0.39,2.17,1.18,0.04,">1 nonsynonymous","T148D G172M L183T",3
"lib1","SARS-CoV-2","GGACAGGTAGTGTAAT",1,46.65,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C31T N40S K128F Q168P",4
"lib1","SARS-CoV-2","GGACATAAAAGACGTA",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39H F44T L60S K94S",4
"lib1","SARS-CoV-2","GGACATAAACCTAGAA",5,61.52,10.54,-0.22,0.06,2.88,1.06,0,"1 nonsynonymous","G116M",1
"lib1","SARS-CoV-2","GGACATAAAGGATGGT",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L A33S Q79A T148F E186T",5
"lib1","SARS-CoV-2","GGACATAAAGGCTACA",7,0.13,NA,NA,NA,NA,NA,NA,"stop","N13L T46S I72* A89L N151V",5
"lib1","SARS-CoV-2","GGACATAAATGTAAAT",2,35.9,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F47I Y143N Q176R",3
"lib1","SARS-CoV-2","GGACATAAGTGTAGAT",3,5.41,6.23,-4.53,2,3,1.08,0.01,">1 nonsynonymous","S41T K56F K87W D97F I104T S129P P149Q",7
"lib1","SARS-CoV-2","GGACATAATACTCTCA",2,6.03,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","E10C T100E W106S Y121F R179D",5
"lib1","SARS-CoV-2","GGACATAATTATTGAA",2,0.82,NA,NA,NA,NA,NA,NA,"stop","F12* P96M P161M",3
"lib1","SARS-CoV-2","GGACATACCTAAACTA",3,13.44,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44W I88Y",2
"lib1","SARS-CoV-2","GGACATACCTAACCAA",14,105.63,8.46,-2.3,0.19,1.53,1.13,0.01,">1 nonsynonymous","N107M E141F",2
"lib1","SARS-CoV-2","GGACATAGACGATTCG",3,18.25,8.38,-2.38,0.11,2.32,1.1,0.01,">1 nonsynonymous","G74L K87Y N109Q Y178C",4
"lib1","SARS-CoV-2","GGACATAGTATGACCA",2,10.28,7.25,-3.51,0.57,1.5,1.01,0.08,">1 nonsynonymous","Y143C V180M E186S T201R",4
"lib1","SARS-CoV-2","GGACATAGTTATACCT",1,25.55,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A81M N107S R124L G146T",4
"lib1","SARS-CoV-2","GGACATATATTAACAA",1,27.22,10.07,-0.7,0.06,2.92,1.03,0,">1 nonsynonymous","V37G G51N Q168T",3
"lib1","SARS-CoV-2","GGACATATCAACGTAA",6,102.76,6.2,-4.57,0.49,1.5,1.18,0.01,">1 nonsynonymous","V71C T85G G146K",3
"lib1","SARS-CoV-2","GGACATCCACAATGAG",18,201.79,10.09,-0.67,0.09,2.25,1.04,0,">1 nonsynonymous","L5V N24W",2
"lib1","SARS-CoV-2","GGACATCCTACTCTTG",6,54.21,6.58,-4.18,0.36,1.5,1.15,0.02,">1 nonsynonymous","A67S I80G E135L",3
"lib1","SARS-CoV-2","GGACATCCTGCGCCGC",3,19.39,10.23,-0.53,0.13,2.34,1.07,0.01,"1 nonsynonymous","E76S",1
"lib1","SARS-CoV-2","GGACATCGCCCCGCAG",1,28.07,9.92,-0.84,0.05,2.02,1.02,0,">1 nonsynonymous","Y93M L122K T201R",3
"lib1","SARS-CoV-2","GGACATGAGGGTTCCA",2,75.31,10.74,-0.02,0.05,2.9,1.06,0,">1 nonsynonymous","G83Y S129D",2
"lib1","SARS-CoV-2","GGACATTAAACAAGAT",2,77.59,10.43,-0.33,0.05,2.83,1.05,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","GGACATTAAACGGCTC",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93A N107T Y119R",3
"lib1","SARS-CoV-2","GGACATTAGAACAAGA",1,41.99,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6Y A18K A42G V52I N107M",5
"lib1","SARS-CoV-2","GGACATTCTAACAAGA",4,56.32,10.66,-0.1,0.04,2.93,1.03,0,"1 nonsynonymous","T63M",1
"lib1","SARS-CoV-2","GGACCAAATACCCTAC",2,12.55,10.33,-0.43,0.09,2.86,1.06,0,">1 nonsynonymous","N13T N151K",2
"lib1","SARS-CoV-2","GGACCAACCCCCACAA",5,111.75,9.34,-1.43,0.06,2.75,1.12,0,">1 nonsynonymous","I2N T85R V115L N157S",4
"lib1","SARS-CoV-2","GGACCAATCATAACAA",2,25.81,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P7V N58G E76R G155V",4
"lib1","SARS-CoV-2","GGACCAATTGCATTTG",1,72.28,9.99,-0.77,0.07,2.89,1,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","GGACCACAACACAAAT",1,13.68,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N107L P149L F160V S200V",4
"lib1","SARS-CoV-2","GGACCACAATAGAGAG",1,50.71,10.69,-0.07,0.07,2.89,1.07,0,"1 nonsynonymous","V52C",1
"lib1","SARS-CoV-2","GGACCACCAGGGCTAA",4,39.82,10.65,-0.12,0.06,2.9,1.04,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","GGACCACCATAACTCT",2,7.08,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","N64L Y143L V173G L183S",4
"lib1","SARS-CoV-2","GGACCACCTTAAGTTG",3,1.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","GGACCACCTTATTACA",1,10.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R L57V P82T",3
"lib1","SARS-CoV-2","GGACCACGACTGTGAG",2,40.62,7.62,-3.14,0.39,1.5,1.13,0.05,">1 nonsynonymous","W23T N118A S129T",3
"lib1","SARS-CoV-2","GGACCACGCACCCAGA",5,84.5,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F12W P161L",2
"lib1","SARS-CoV-2","GGACCACGGTTCATTA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","C6K D34Y S41R N107Y G116L S139* T148S",7
"lib1","SARS-CoV-2","GGACCACTCGGTACCC",8,109.31,10.46,-0.3,0.06,2.83,1.06,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","GGACCACTTATCCTAC",5,10.53,6.1,-4.66,2,3,1.21,0.01,">1 nonsynonymous","F17Y R73E",2
"lib1","SARS-CoV-2","GGACCAGTCCAAGGAG",2,5.43,7.5,-3.26,0.54,1.5,1.11,0.06,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","GGACCAGTGGAGTAGA",2,17.61,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C49E G152L K199A",3
"lib1","SARS-CoV-2","GGACCATACAGATTCA",6,62.94,10.1,-0.66,0.05,2.85,1.05,0,">1 nonsynonymous","F12L V37G L122C",3
"lib1","SARS-CoV-2","GGACCATGTGACGCGC",3,67.72,8.53,-2.23,0.16,1.5,1.12,0.01,">1 nonsynonymous","N4Y V37D L122D Y178A",4
"lib1","SARS-CoV-2","GGACCATTGAAGTTTA",4,0,NA,NA,NA,NA,NA,NA,"stop","I2L V65A Y121T Y143*",4
"lib1","SARS-CoV-2","GGACCCAAATATACAG",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q N13F S45L A89L D97Y T140Y",6
"lib1","SARS-CoV-2","GGACCCAGCCACAACA",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K C31L P177F",3
"lib1","SARS-CoV-2","GGACCCCAATCGCTCT",6,25.41,9.87,-0.9,0.17,2,1.11,0.01,">1 nonsynonymous","A42Y L122C F185H",3
"lib1","SARS-CoV-2","GGACCCGAACATGCAT",9,96.96,10.39,-0.38,0.04,2.86,1.03,0,">1 nonsynonymous","G51V L122S T201I",3
"lib1","SARS-CoV-2","GGACCCGAGACCTATA",7,36.64,8.3,-2.46,0.24,1.5,1.08,0.02,">1 nonsynonymous","F8M N107M L122Q G152R",4
"lib1","SARS-CoV-2","GGACCCGCAATAATCC",4,53.92,10.81,0.05,0.06,2.9,1.05,0,"1 nonsynonymous","N1T",1
"lib1","SARS-CoV-2","GGACCCTAAAAGCGAG",1,5.62,10.92,0.16,0.14,2.7,1.33,0,"1 nonsynonymous","Y39E",1
"lib1","SARS-CoV-2","GGACCCTCGATTGGAC",3,10.87,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R73P Q79V A105F",3
"lib1","SARS-CoV-2","GGACCCTTAAACCTTC",6,86.88,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100C N107R F134L Y175M",4
"lib1","SARS-CoV-2","GGACCCTTTCTCCCGG",3,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R S69E L125M F160M",4
"lib1","SARS-CoV-2","GGACCGAAAACAGGAT",1,3.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","GGACCGACATTAAGGG",5,32.75,10.22,-0.54,0.08,2.75,1.04,0,">1 nonsynonymous","S41F L57A",2
"lib1","SARS-CoV-2","GGACCGAGAAATCCAT",5,64.46,8.77,-2,0.18,1.62,1.15,0.01,">1 nonsynonymous","D90S F99L G155S",3
"lib1","SARS-CoV-2","GGACCGCAAAAAACAA",1,13.56,8.57,-2.2,0.27,2.18,1.05,0.04,">1 nonsynonymous","N107L P149Q",2
"lib1","SARS-CoV-2","GGACCGCCAACCTGAA",3,9.32,9.08,-1.68,0.14,1.75,1.09,0.01,">1 nonsynonymous","Y91T F160V",2
"lib1","SARS-CoV-2","GGACCGCCAATATGTG",1,11.37,9.15,-1.62,0.18,2.4,1.08,0.01,">1 nonsynonymous","L5K A89T I142E",3
"lib1","SARS-CoV-2","GGACCGCTATCGCTAC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","K26* N64I I88R",3
"lib1","SARS-CoV-2","GGACCGGACCCGAACC",8,68.71,9.54,-1.22,0.06,2.86,1.08,0,"1 nonsynonymous","G117N",1
"lib1","SARS-CoV-2","GGACCGGCCAGCCAGC",7,73.37,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V52L R73L G146W",3
"lib1","SARS-CoV-2","GGACCGGCCATCGACC",3,24.59,9.63,-1.13,0.11,2.11,1.02,0.01,">1 nonsynonymous","C6N S36K F44A",3
"lib1","SARS-CoV-2","GGACCGGCGACCCATG",2,16.22,6,-4.76,2,1.5,1.35,0.04,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","GGACCGTACAATCGTT",2,14.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38K C61P R179F",3
"lib1","SARS-CoV-2","GGACCTAAAGTGTTTA",2,25.26,10.73,-0.04,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACCTAACGCTACAT",6,80.34,9.62,-1.15,0.09,2.39,1.06,0,">1 nonsynonymous","C6G A14C",2
"lib1","SARS-CoV-2","GGACCTAATGTCCCCT",2,28.46,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P7D W106S P177E",3
"lib1","SARS-CoV-2","GGACCTAGAAAGTAAG",2,18.66,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","E10D G152H C158L",3
"lib1","SARS-CoV-2","GGACCTAGGTGTCGTA",1,89.76,9.53,-1.23,0.09,2.79,1.03,0,">1 nonsynonymous","D90S D97R Y175H",3
"lib1","SARS-CoV-2","GGACCTAGTAATGTAG",1,19.15,10.59,-0.18,0.06,2.89,1.08,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","GGACCTATAAAAAAGC",4,32.63,10.53,-0.23,0.08,2.93,1.02,0,">1 nonsynonymous","L5A Y39W V65A S200N",4
"lib1","SARS-CoV-2","GGACCTATAACCACCA",1,6.12,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V20M L95F P149G Q168L",4
"lib1","SARS-CoV-2","GGACCTATATATTAAC",5,57.33,6.2,-4.57,0.69,1.68,1.22,0.02,">1 nonsynonymous","N1P N64C L125F G152R Y175E",5
"lib1","SARS-CoV-2","GGACCTATCCTACTTG",9,118.93,7.46,-3.3,0.29,1.5,1.11,0.02,">1 nonsynonymous","F44H A105L F156R P169T",4
"lib1","SARS-CoV-2","GGACCTCCCAATCACA",7,49.6,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P54K V77K E135M Q168K",4
"lib1","SARS-CoV-2","GGACCTCTGATATATG",3,69.71,10.75,-0.01,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GGACCTCTTTGCCTTT",6,59.57,10.79,0.03,0.05,2.95,1.02,0,"1 nonsynonymous","L60G",1
"lib1","SARS-CoV-2","GGACCTGAACCTAAAA",3,56.46,8.35,-2.41,0.39,1.5,1,0.08,">1 nonsynonymous","T3V V32S S45L P133I S184C",5
"lib1","SARS-CoV-2","GGACCTGACATCAGCT",2,24.06,6.3,-4.46,0.69,1.52,1.22,0.02,">1 nonsynonymous","I28R T63K G83N D90L L95M E135S",6
"lib1","SARS-CoV-2","GGACCTGAGAAATATA",1,48.91,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","T63H K94P T100C T201P",4
"lib1","SARS-CoV-2","GGACCTGCGAGTTATT",1,17.2,9.92,-0.84,0.11,2.52,1.09,0.01,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","GGACCTTAAAACACTT",6,120.77,9.07,-1.7,0.17,1.5,1.03,0.01,">1 nonsynonymous","T100V W106L G155W",3
"lib1","SARS-CoV-2","GGACCTTGAAGTGAAT",4,35.22,10.33,-0.43,0.09,2.8,1,0,">1 nonsynonymous","I104T E141T",2
"lib1","SARS-CoV-2","GGACCTTTACGCAATA",2,56.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","GGACGAAAACTAACGA",1,14.17,10.32,-0.44,0.13,2.95,1,0,">1 nonsynonymous","P7H C61P N120H",3
"lib1","SARS-CoV-2","GGACGAACCAACGTGT",20,61.07,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86V C102A",2
"lib1","SARS-CoV-2","GGACGACAGCCATTGC",10,130.1,10.21,-0.55,0.07,2.43,1,0,">1 nonsynonymous","F134C L162I",2
"lib1","SARS-CoV-2","GGACGACATAATATTA",3,14.34,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L5K A42P D137F G155F T201K",5
"lib1","SARS-CoV-2","GGACGACATGTGAGTA",2,32.69,10.2,-0.57,0.08,2.94,1,0,">1 nonsynonymous","T85A F156Q T201F",3
"lib1","SARS-CoV-2","GGACGACCACACATGT",2,6.78,9.94,-0.82,0.17,2.42,1.03,0.01,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","GGACGACTGCAGACCA",2,11.59,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6T G155L V181F",3
"lib1","SARS-CoV-2","GGACGAGGTCTAGAAT",4,26.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14T V52K K114V G146L",4
"lib1","SARS-CoV-2","GGACGATAAAAACTCC",2,18.86,8.07,-2.7,0.3,1.5,1.09,0.04,">1 nonsynonymous","G9S A89K N120K",3
"lib1","SARS-CoV-2","GGACGATGAGGAACTA",1,22.76,10.41,-0.36,0.08,2.85,1.07,0,">1 nonsynonymous","S129I H189C",2
"lib1","SARS-CoV-2","GGACGCAACCAAACTA",10,177.68,10.05,-0.71,0.07,2.33,1.05,0,">1 nonsynonymous","I2K S45L K56V T100Y",4
"lib1","SARS-CoV-2","GGACGCAGAAAATGGG",5,42.12,8.22,-2.54,0.27,1.5,1.04,0.03,">1 nonsynonymous","V11T A89Q P149S",3
"lib1","SARS-CoV-2","GGACGCATATAAGGTA",5,55.99,8.18,-2.59,0.12,2.4,1.18,0.01,">1 nonsynonymous","N157C K199L",2
"lib1","SARS-CoV-2","GGACGCCAAAAGTCCC",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y50L C61K T170S",4
"lib1","SARS-CoV-2","GGACGCCTTATAAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9Y E10* V37A T46F L95Y V103L F156W",7
"lib1","SARS-CoV-2","GGACGCGACAGCTTAC",1,0.94,NA,NA,NA,NA,NA,NA,"stop","W23* V37S V77M G83I G86S",5
"lib1","SARS-CoV-2","GGACGCGCTAACCTCC",2,14.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S N92K G117L",3
"lib1","SARS-CoV-2","GGACGCGGTGAAGACG",7,67.93,6.41,-4.35,0.39,1.5,1.18,0.01,">1 nonsynonymous","F8C G117R E135L",3
"lib1","SARS-CoV-2","GGACGCGTGTTAAACG",2,9.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S41L T55S W106K C150W",4
"lib1","SARS-CoV-2","GGACGCTCTTATGGGA",6,167.26,10.26,-0.51,0.04,2.88,1.02,0,">1 nonsynonymous","S36L A42D L60K",3
"lib1","SARS-CoV-2","GGACGCTTGGTGAAAA",5,143.2,9.8,-0.96,0.04,2.8,1.06,0,">1 nonsynonymous","T100W L125P",2
"lib1","SARS-CoV-2","GGACGGAAATATTAAT",2,31,8.64,-2.12,0.18,1.5,1.15,0.01,"1 nonsynonymous","D68S",1
"lib1","SARS-CoV-2","GGACGGAATATTAATC",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L L162W",2
"lib1","SARS-CoV-2","GGACGGAGTGCAAAAT",6,63.18,9.73,-1.03,0.11,1.94,1.07,0,">1 nonsynonymous","K26G C61V T148I",3
"lib1","SARS-CoV-2","GGACGGATCTATTCCA",15,91,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y91W T140P P149V Y175I",4
"lib1","SARS-CoV-2","GGACGGATGAACAGGA",4,45.33,10.81,0.04,0.13,2.82,1.1,0.01,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","GGACGGCACACTTTGT",9,92.94,9.85,-0.91,0.09,2.45,1.05,0,">1 nonsynonymous","V20P D90C",2
"lib1","SARS-CoV-2","GGACGGCCTCTATCGA",7,19.24,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F70E G83Y Y119R V180Q",4
"lib1","SARS-CoV-2","GGACGGCGTAATTTCC",1,46.97,6.24,-4.53,0.7,1.5,1.16,0.02,">1 nonsynonymous","E10S R73L D112Y T201K",4
"lib1","SARS-CoV-2","GGACGGGGAATTAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V N157R",2
"lib1","SARS-CoV-2","GGACGGTAGCACCGAT",2,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P V65K N107D T201R",4
"lib1","SARS-CoV-2","GGACGGTGAAACAAAG",4,58.81,9.75,-1.01,0.07,2.79,1.09,0,">1 nonsynonymous","D97I Y143L",2
"lib1","SARS-CoV-2","GGACGTAAAGGAAAAC",4,115.53,9.77,-1,0.04,2.91,1.04,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","GGACGTAACCTCTCCT",17,247.89,7.29,-3.47,0.14,1.5,1.15,0.01,"1 nonsynonymous","C150K",1
"lib1","SARS-CoV-2","GGACGTACGTGGGCCA",3,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T S41M N92I L122S G174V",5
"lib1","SARS-CoV-2","GGACGTAGATTAGTTC",3,58.53,10.76,-0.01,0.06,2.96,1,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","GGACGTAGCCCTCCAG",5,65.16,8.78,-1.98,0.07,2.93,1.05,0,"1 nonsynonymous","S113V",1
"lib1","SARS-CoV-2","GGACGTCCGCGCGGGT",4,70.72,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","K56V V77Y N130C",3
"lib1","SARS-CoV-2","GGACGTCTAAATAACT",2,6.69,6,-4.76,0.95,3,1.01,0,">1 nonsynonymous","S43Y K56V L95P A105E L122T N171H G174R",7
"lib1","SARS-CoV-2","GGACGTGACCTAGGAA",8,93.48,9.13,-1.63,0.14,2.34,1.14,0.01,">1 nonsynonymous","V52T K128S G155R S164G",4
"lib1","SARS-CoV-2","GGACGTTACCTAAAAC",1,19.26,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y91T E141S G155C",3
"lib1","SARS-CoV-2","GGACGTTAGATGTAAT",5,30.76,7.25,-3.52,0.19,1.5,1.1,0.01,">1 nonsynonymous","F44L Y50H T63Q T140K V173G",5
"lib1","SARS-CoV-2","GGACGTTGACCTAACT",1,33.15,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y35H T63C Y91T",3
"lib1","SARS-CoV-2","GGACGTTTTCTTATCA",1,8.75,10.27,-0.5,0.1,2.87,1,0.01,">1 nonsynonymous","A22F K56L",2
"lib1","SARS-CoV-2","GGACTAAAAATTCGGC",5,46.48,7.89,-2.87,0.16,1.5,1.16,0.01,">1 nonsynonymous","A22L N120I S129P",3
"lib1","SARS-CoV-2","GGACTAAACATCCGAA",3,47.75,10.2,-0.56,0.05,2.95,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","GGACTAAGCCCCGTTT",2,48.51,6,-4.76,1.59,3,1.12,0,">1 nonsynonymous","S41G I142R N151S F156Q V180P",5
"lib1","SARS-CoV-2","GGACTAATGACCCAGT",11,1.34,NA,NA,NA,NA,NA,NA,"stop","Y50I L162*",2
"lib1","SARS-CoV-2","GGACTAATTACCCAAA",2,12.41,10.75,-0.01,0.09,2.91,1.01,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","GGACTACAACACGTAG",6,85.35,10.68,-0.08,0.04,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACTACATCCGGGCG",2,29.18,8.14,-2.62,0.17,2.45,1.11,0.01,">1 nonsynonymous","N4Q Y175L",2
"lib1","SARS-CoV-2","GGACTACATTGTGTCA",2,22.94,10.15,-0.61,0.27,1.5,1.1,0.04,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","GGACTACCCAGAGACA",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58T V103G Q163C",3
"lib1","SARS-CoV-2","GGACTACTAACAAAGT",1,5.39,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","N1M A14S F44V N92V S139N Y165L",6
"lib1","SARS-CoV-2","GGACTACTTGAGTGAA",1,22.89,10.71,-0.05,0.08,2.97,1,0,">1 nonsynonymous","D97H S184Q P191T",3
"lib1","SARS-CoV-2","GGACTACTTGGAATAT",6,55.62,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N1G G9N A14S R27N A42K G83W Y93P",7
"lib1","SARS-CoV-2","GGACTAGAAATACTGC",3,18.35,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","W23K Q84T F99S",3
"lib1","SARS-CoV-2","GGACTAGAACTTTGAT",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y I28K E135A L183R",4
"lib1","SARS-CoV-2","GGACTAGACAAGCGTA",2,52.81,10.63,-0.13,0.03,2.96,1.01,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","GGACTAGCAACAGTCT",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93I T140N",2
"lib1","SARS-CoV-2","GGACTAGGCCGAATGT",8,50.69,10.2,-0.56,0.06,2.67,1.05,0,">1 nonsynonymous","N1V T85E Q144D",3
"lib1","SARS-CoV-2","GGACTATAAAAACTAT",1,19.95,10.74,-0.03,0.1,2.95,1,0,"1 nonsynonymous","F62A",1
"lib1","SARS-CoV-2","GGACTATAAGGCCAAA",22,284.62,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y35R A89N L122M P169C V180W",5
"lib1","SARS-CoV-2","GGACTATAATGTCTGG",2,237.33,10.07,-0.69,0.07,2.45,1.02,0,">1 nonsynonymous","F62S N120A Y178N",3
"lib1","SARS-CoV-2","GGACTATAGATGGCGC",5,106.88,10.59,-0.18,0.07,2.86,1,0,">1 nonsynonymous","S139V N171Y",2
"lib1","SARS-CoV-2","GGACTATGAAAATAGT",2,29.69,7.23,-3.53,0.19,1.52,1.12,0.01,">1 nonsynonymous","F12W N40R L95V G174W",4
"lib1","SARS-CoV-2","GGACTATGTATTGATA",4,18.3,9.76,-1.01,0.11,2.43,1.06,0.01,">1 nonsynonymous","L122E E135L",2
"lib1","SARS-CoV-2","GGACTATTGTTAGCTA",2,34.98,9.81,-0.95,0.34,1.5,1,0.05,">1 nonsynonymous","K48E D98L R127L Y143F",4
"lib1","SARS-CoV-2","GGACTCAAAGAATGAA",2,77.8,10.78,0.02,0.07,2.9,1.06,0,">1 nonsynonymous","Y39T N120A",2
"lib1","SARS-CoV-2","GGACTCAGAACCGCAA",3,31.92,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N40V A105R A145S",3
"lib1","SARS-CoV-2","GGACTCATACCAGCCG",2,32.65,9.74,-1.02,0.31,1.55,1.14,0.07,">1 nonsynonymous","V11R L122Y S184C",3
"lib1","SARS-CoV-2","GGACTCATCACTTGGA",1,38.47,9.47,-1.3,0.12,2.16,1.03,0.01,">1 nonsynonymous","G51T T100L Y143W Q168H",4
"lib1","SARS-CoV-2","GGACTCCCGCAAATAT",3,34,10.69,-0.07,0.07,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGACTCCTAAATTAGG",4,25.84,6.67,-4.09,0.52,1.5,1.22,0.03,">1 nonsynonymous","V52S Y66W A105I",3
"lib1","SARS-CoV-2","GGACTCCTTAAGTATC",1,12.99,8.61,-2.15,0.09,3,1.03,0.01,">1 nonsynonymous","L5N E10D R27M A145D",4
"lib1","SARS-CoV-2","GGACTCGAAACTTTAC",1,47.15,10.59,-0.18,0.07,2.8,1.1,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","GGACTCGAATTTGGTC",6,1.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GGACTCGCACCCCTAA",9,109.68,10.73,-0.03,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACTCGTATATCACG",5,14.03,6.91,-3.86,0.11,1.98,1.08,0,"1 nonsynonymous","R179S",1
"lib1","SARS-CoV-2","GGACTCTAATATATCA",5,47.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16W S129L Q144L P161W",4
"lib1","SARS-CoV-2","GGACTCTATAATGACA",5,87.31,6.05,-4.72,1.08,1.5,1.26,0.03,">1 nonsynonymous","A14V G86I G155A S200M",4
"lib1","SARS-CoV-2","GGACTCTATGGGAACT",2,65.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N30T R73T Y123T E154D",4
"lib1","SARS-CoV-2","GGACTCTCAGCACCCT",4,174.55,10.59,-0.17,0.05,2.91,1.03,0,"1 nonsynonymous","I138G",1
"lib1","SARS-CoV-2","GGACTCTGGTCGACGC",3,39.18,10.69,-0.07,0.08,2.94,1.04,0,">1 nonsynonymous","G9T N120R",2
"lib1","SARS-CoV-2","GGACTCTTTACTCGAT",1,17.49,8.71,-2.06,0.28,2.1,1.12,0.02,">1 nonsynonymous","E10T A18P G86A",3
"lib1","SARS-CoV-2","GGACTGAATAAAATGC",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C R179V",2
"lib1","SARS-CoV-2","GGACTGACAAGATTAG",3,179.55,10.77,0.01,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGACTGAGAACTATGG",1,13.76,9.94,-0.83,0.13,2.61,1.06,0,">1 nonsynonymous","A105G P149F",2
"lib1","SARS-CoV-2","GGACTGATCTTCGATC",6,150.56,10.45,-0.31,0.05,2.91,1,0,">1 nonsynonymous","L5I T15Q K132L",3
"lib1","SARS-CoV-2","GGACTGATGAATTAGC",1,23.07,9.67,-1.1,0.16,1.89,1.1,0.01,">1 nonsynonymous","T100R N107C G116S H189Y",4
"lib1","SARS-CoV-2","GGACTGATGCCCACCA",3,25.78,8.09,-2.67,0.4,1.5,1.04,0.06,">1 nonsynonymous","G101L S129R S200V",3
"lib1","SARS-CoV-2","GGACTGCGAAAAAGGC",6,123.4,9.04,-1.73,0.11,2.39,1.15,0.01,">1 nonsynonymous","I104V P161M P197Y",3
"lib1","SARS-CoV-2","GGACTGCGCCTTTACT",1,193.83,6,-4.76,1.15,1.5,1.14,0.01,">1 nonsynonymous","A89R F99R I142W G152Y",4
"lib1","SARS-CoV-2","GGACTGCGGTTACCCG",6,10.39,NA,NA,NA,NA,NA,NA,"stop","E10* N107L",2
"lib1","SARS-CoV-2","GGACTGCTTAAATAGA",3,18.68,6.96,-3.8,0.59,1.58,1.02,0.05,">1 nonsynonymous","K87R L95N V103Q I142T G174W",5
"lib1","SARS-CoV-2","GGACTGCTTACGCGGC",1,2.9,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","GGACTGGAAACCGTGT",3,68.67,9.87,-0.9,0.16,1.81,1.07,0.01,">1 nonsynonymous","L95T V173A K199W",3
"lib1","SARS-CoV-2","GGACTGTAGACATGGA",1,9.46,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","F12K A22P R124D",3
"lib1","SARS-CoV-2","GGACTTAATTAACTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N58R I80W D90* Y143F",4
"lib1","SARS-CoV-2","GGACTTAATTATCCTC",1,40.07,10.75,-0.02,0.05,2.88,1.02,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","GGACTTACTACATGGA",9,185.06,8.66,-2.11,0.06,2.69,1.07,0,">1 nonsynonymous","A18P N64Q G117L K128L P169S",5
"lib1","SARS-CoV-2","GGACTTACTGACTCCC",3,45.57,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6S L95S",2
"lib1","SARS-CoV-2","GGACTTACTTATCTAA",4,94.14,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3S L122E Y143S P177W",4
"lib1","SARS-CoV-2","GGACTTAGTAATCCAG",7,140.59,10.71,-0.05,0.04,2.93,1.04,0,">1 nonsynonymous","S53T K132G",2
"lib1","SARS-CoV-2","GGACTTAGTATCTCCC",1,44.76,6.18,-4.59,1.09,1.5,1.23,0.03,">1 nonsynonymous","F17L D97I Y121S",3
"lib1","SARS-CoV-2","GGACTTCGGCGAACTG",1,59.34,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T46G Y91E N107E",3
"lib1","SARS-CoV-2","GGACTTCGTAAGAACT",3,22.85,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K87S G101Y F134N",3
"lib1","SARS-CoV-2","GGACTTCTCAAAGAGA",5,49.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A81P D97S",2
"lib1","SARS-CoV-2","GGACTTGACAATCATA",3,14.62,10.38,-0.39,0.44,1.98,1,0.08,">1 nonsynonymous","N1Y C6H T85L D98Y V194L",5
"lib1","SARS-CoV-2","GGACTTGATACCTTAT",7,108.18,10.62,-0.14,0.05,2.88,1.05,0,">1 nonsynonymous","C61H G116E",2
"lib1","SARS-CoV-2","GGACTTGGGATCACTC",5,76.77,10.14,-0.63,0.06,2.71,1.02,0,">1 nonsynonymous","V65F T85D",2
"lib1","SARS-CoV-2","GGACTTGGGCAAACCA",4,18.42,6.01,-4.75,0.9,1.5,1.04,0.02,">1 nonsynonymous","G83V Q84Y Y123T S139P G152L",5
"lib1","SARS-CoV-2","GGACTTGGGCGATTAA",9,98.13,9.48,-1.29,0.19,1.5,1.03,0.01,">1 nonsynonymous","F12R A18T F160W",3
"lib1","SARS-CoV-2","GGACTTGTCTCATATA",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141S N151K P161S",3
"lib1","SARS-CoV-2","GGACTTTAATCCCAGT",3,55.48,6.49,-4.27,0.44,1.5,1.08,0.02,">1 nonsynonymous","G117V N157F G166T",3
"lib1","SARS-CoV-2","GGACTTTACTACAATG",1,8.38,9.88,-0.88,0.29,1.5,1.04,0.06,">1 nonsynonymous","N1V G86S Q163V G174R",4
"lib1","SARS-CoV-2","GGACTTTATGCCGCAT",3,103.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39T P82R L95V",3
"lib1","SARS-CoV-2","GGACTTTCATTATAAA",9,97.24,10.8,0.04,0.06,2.93,1.04,0,"1 nonsynonymous","Q168A",1
"lib1","SARS-CoV-2","GGACTTTCTCACCTTT",2,6.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K Q79H P82R V173M Q176L",5
"lib1","SARS-CoV-2","GGACTTTGGTGCCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12G S19A R27V I88E L122* D137E",6
"lib1","SARS-CoV-2","GGACTTTTAAACCACT",2,14.28,9.88,-0.88,0.12,2.23,1.06,0.01,">1 nonsynonymous","L5I D112I G174N",3
"lib1","SARS-CoV-2","GGAGAAAAACAGTCAA",1,105.1,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S36V K48L Y123T R127Q E154D Q176T",6
"lib1","SARS-CoV-2","GGAGAAAAACTCGTCT",1,22.36,6,-4.76,1.64,1.5,1.21,0.02,">1 nonsynonymous","C6F G152V Y165R",3
"lib1","SARS-CoV-2","GGAGAAAAAGGAACCA",2,58.46,10.8,0.03,0.06,2.92,1.04,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","GGAGAAAACGGAAAAT",3,79.71,8.07,-2.69,0.15,2.3,1.12,0.01,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","GGAGAAAACGTAGCGC",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S L60G T100R N107Y L122I",5
"lib1","SARS-CoV-2","GGAGAAAACTAGCCAA",2,9.95,10.17,-0.59,0.37,1.72,1.06,0.06,">1 nonsynonymous","G51V L122R Q144I",3
"lib1","SARS-CoV-2","GGAGAAACCTGACGTA",2,54.69,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N30T Y39V T55S R124H S139V Q163R Q176R",7
"lib1","SARS-CoV-2","GGAGAAAGAGTGACCT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","T55* I72D T170P T201K",4
"lib1","SARS-CoV-2","GGAGAAAGATTACGTT",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59P I88L C150V",3
"lib1","SARS-CoV-2","GGAGAAAGCAATCATC",7,13.97,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13P V180F",2
"lib1","SARS-CoV-2","GGAGAAAGCCCACACA",4,40.1,10.24,-0.52,0.08,2.9,1.05,0,">1 nonsynonymous","K87N N171I",2
"lib1","SARS-CoV-2","GGAGAAAGTGGTGAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V I80V",2
"lib1","SARS-CoV-2","GGAGAAATACATCATG",11,132.47,10.2,-0.57,0.04,2.88,1.01,0,">1 nonsynonymous","L5M Y35S",2
"lib1","SARS-CoV-2","GGAGAAATGATATTAT",1,45.28,10.46,-0.3,0.03,2.99,1,0,">1 nonsynonymous","K87N N130A",2
"lib1","SARS-CoV-2","GGAGAACAAACAATTG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib1","SARS-CoV-2","GGAGAACACTGGTCCA",21,334.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L60I N107R R127F Y165V S200K",5
"lib1","SARS-CoV-2","GGAGAACCCTCGCTTA",2,12.85,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A33S A42F K56A F99V A105L A145S",6
"lib1","SARS-CoV-2","GGAGAACCCTTCCAAT",2,32,8.35,-2.41,0.22,2.03,1.18,0.02,"1 nonsynonymous","Y143K",1
"lib1","SARS-CoV-2","GGAGAACTCTCACCAA",2,24.33,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L38I I80E L162S N171K Q176Y",5
"lib1","SARS-CoV-2","GGAGAAGCACAAAATT",1,20.65,10.74,-0.02,0.09,2.83,1.07,0.01,">1 nonsynonymous","I2F T148K T201Q",3
"lib1","SARS-CoV-2","GGAGAAGCTAACTACG",2,14.46,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","I72R K114R G152Y G174L Y178C P197R",6
"lib1","SARS-CoV-2","GGAGAAGGAAGTCTAG",3,44.15,9.49,-1.27,0.25,1.5,1.08,0.04,">1 nonsynonymous","L60M V77Y P149A",3
"lib1","SARS-CoV-2","GGAGAAGGTCACGCAA",6,0.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","GGAGAAGTAATCTGCT",4,64.29,6,-4.76,1.39,3,1.09,0,">1 nonsynonymous","L5G A105M G146R Y175S V182A",5
"lib1","SARS-CoV-2","GGAGAAGTATGTCGGG",4,29.15,9.11,-1.66,0.28,1.59,1.28,0.03,"1 nonsynonymous","F8R",1
"lib1","SARS-CoV-2","GGAGAATAAATTACCC",2,6.98,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","V20H S41L F62N",3
"lib1","SARS-CoV-2","GGAGAATAACCATTGA",1,4.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","GGAGAATCAGACATGG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50D D75* I80K",3
"lib1","SARS-CoV-2","GGAGAATCGCGAATCG",5,60.91,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A22M V32T D98T N120Q R136N Y159D",6
"lib1","SARS-CoV-2","GGAGAATGGGTGCAGT",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K A42D A81D",3
"lib1","SARS-CoV-2","GGAGAATTATAAAATA",3,16.16,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V65K D90Y D137G P177L",4
"lib1","SARS-CoV-2","GGAGAATTCATAATCA",1,1.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","GGAGACAACTCAATAA",2,14.39,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A42V K128F F167L",3
"lib1","SARS-CoV-2","GGAGACAATAATTCAT",1,2.05,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GGAGACAATAGAATAA",2,2.32,NA,NA,NA,NA,NA,NA,"stop","E10* L38V S53V N64G D97Y R179P",6
"lib1","SARS-CoV-2","GGAGACACAATAATTC",6,20.61,10.44,-0.32,0.05,2.88,1.03,0,">1 nonsynonymous","S129Y T140G",2
"lib1","SARS-CoV-2","GGAGACACCTTAATCC",2,64.34,10.1,-0.66,0.06,2.43,1.04,0,">1 nonsynonymous","T3K V37Y I104H",3
"lib1","SARS-CoV-2","GGAGACAGGTGAAAAA",4,74.76,9.79,-0.98,0.12,1.79,1.1,0,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","GGAGACAGGTTAATAA",3,113.88,9.91,-0.86,0.06,2.5,1.03,0,">1 nonsynonymous","C61A S139I",2
"lib1","SARS-CoV-2","GGAGACAGTCTTACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* P54S D98S",3
"lib1","SARS-CoV-2","GGAGACATTTTGGGAA",5,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D34Y I104S Y165S R179D",5
"lib1","SARS-CoV-2","GGAGACCACGAGGAGT",3,15.81,6,-4.76,2,3,1.19,0,">1 nonsynonymous","D68K P82S T201L",3
"lib1","SARS-CoV-2","GGAGACCAGTATATAT",2,13.13,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","K48N G74T V103F",3
"lib1","SARS-CoV-2","GGAGACCATTGCCGAT",1,65.58,6,-4.76,1.89,1.5,1.13,0.01,">1 nonsynonymous","T55C D98A Y159S",3
"lib1","SARS-CoV-2","GGAGACCCTACCACAC",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L A33D A145C",3
"lib1","SARS-CoV-2","GGAGACCGATACCGGA",1,64.01,10.26,-0.51,0.05,2.92,1.01,0,">1 nonsynonymous","S36D A42S C61W T100L N110K T148N",6
"lib1","SARS-CoV-2","GGAGACCGTATTCCAA",5,56.77,8.85,-1.91,0.21,1.51,1.26,0.02,">1 nonsynonymous","I80M N120C",2
"lib1","SARS-CoV-2","GGAGACCTACGCACGC",1,25.08,10.07,-0.7,0.15,2.89,1,0.01,">1 nonsynonymous","Y119R N171A",2
"lib1","SARS-CoV-2","GGAGACGAATAATATT",2,0.48,NA,NA,NA,NA,NA,NA,"stop","V52D C102*",2
"lib1","SARS-CoV-2","GGAGACGCATTCTAAC",3,0.7,NA,NA,NA,NA,NA,NA,"stop","L60* A89Y D112N N151P",4
"lib1","SARS-CoV-2","GGAGACGTGTATCTGA",4,28.67,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N13Y Y91H Y123W F134L E154D",5
"lib1","SARS-CoV-2","GGAGACTAAGGATACA",6,44.91,8.22,-2.54,0.27,1.5,1.14,0.02,">1 nonsynonymous","F12S N30M K87H V153H Q163E",5
"lib1","SARS-CoV-2","GGAGACTCTTATCATT",5,44.11,10.67,-0.09,0.06,2.87,1.01,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","GGAGAGAATAATCACG",1,24.28,8.81,-1.95,0.23,1.5,1.07,0.03,">1 nonsynonymous","Y35Q I104C Q144M",3
"lib1","SARS-CoV-2","GGAGAGAATATACATA",1,57.02,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I2V F70L N120T Y175L",4
"lib1","SARS-CoV-2","GGAGAGAGAATAAAAC",10,207.39,9.57,-1.19,0.04,2.89,1.07,0,">1 nonsynonymous","S43D Y119Q",2
"lib1","SARS-CoV-2","GGAGAGAGTAATAGCT",3,40.04,8.65,-2.11,0.09,2.37,1.13,0,">1 nonsynonymous","C61A N107M",2
"lib1","SARS-CoV-2","GGAGAGATACCTAGGA",5,58.08,9.09,-1.67,0.1,1.79,1.09,0,">1 nonsynonymous","L57E A105Y F156W",3
"lib1","SARS-CoV-2","GGAGAGATGATTTAAG",3,16.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10H P96F",2
"lib1","SARS-CoV-2","GGAGAGATTGATATTA",3,6.36,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","S41T K56F K87W D97F I104T S129P P149Q",7
"lib1","SARS-CoV-2","GGAGAGCTCGAGCTAT",4,37.45,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5R W23L I88S",3
"lib1","SARS-CoV-2","GGAGAGCTCTATAAAA",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N K94V",2
"lib1","SARS-CoV-2","GGAGAGGTGAAATAGA",3,54.75,6.34,-4.43,0.62,1.5,1.12,0.03,">1 nonsynonymous","K56T F70Y G146W",3
"lib1","SARS-CoV-2","GGAGAGTATAGATTCT",3,31.23,8.29,-2.47,0.21,1.5,1.06,0.02,">1 nonsynonymous","C6F L38R G152S",3
"lib1","SARS-CoV-2","GGAGAGTATGTGGAGT",10,78.64,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61S D68G P161S",3
"lib1","SARS-CoV-2","GGAGAGTCAATGGCGA",3,86.5,10.47,-0.3,0.04,2.97,1.01,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","GGAGAGTCAGTGCGAA",6,49.52,10.71,-0.05,0.07,2.92,1.07,0,">1 nonsynonymous","S41N L60N T85S F160Y",4
"lib1","SARS-CoV-2","GGAGAGTTAGTGAGCA",5,94.53,10.59,-0.17,0.05,2.93,1.04,0,">1 nonsynonymous","T63G K132M",2
"lib1","SARS-CoV-2","GGAGATAAAATCCTCT",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M S41F Y91T S113M",4
"lib1","SARS-CoV-2","GGAGATAACACTACGC",3,67.47,9.81,-0.96,0.06,2.91,1.01,0,">1 nonsynonymous","N64K Y119K",2
"lib1","SARS-CoV-2","GGAGATAACGATTGTA",4,43.61,10.58,-0.18,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGATAAGAGAGGCA",4,55.7,8.43,-2.33,0.25,1.5,1.15,0.03,">1 nonsynonymous","S43I R73M T100L W106A S200H",5
"lib1","SARS-CoV-2","GGAGATACAAGCAATC",2,66.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35P K87I N92L F134G P149H Q176V",6
"lib1","SARS-CoV-2","GGAGATACCGCACACC",2,0.52,NA,NA,NA,NA,NA,NA,"stop","V37Y D97* P149N F160T",4
"lib1","SARS-CoV-2","GGAGATACTAAATTAC",9,95.46,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N92Y T201L",2
"lib1","SARS-CoV-2","GGAGATAGCAATATCG",3,17.72,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","A22R K56S Y123C L131T C150T K198Y",6
"lib1","SARS-CoV-2","GGAGATCAAAACCCCG",5,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V115H E135R",2
"lib1","SARS-CoV-2","GGAGATCCAATTATAG",12,77.05,8.79,-1.97,0.2,1.8,1.17,0.02,">1 nonsynonymous","P96M G196L",2
"lib1","SARS-CoV-2","GGAGATGAGAAGACCT",2,83.52,8.94,-1.82,0.06,2.77,1.13,0,">1 nonsynonymous","N109T K114L",2
"lib1","SARS-CoV-2","GGAGATGATATGTTAA",3,46.79,8.54,-2.22,0.13,2.46,1.09,0.01,">1 nonsynonymous","D90T G117T",2
"lib1","SARS-CoV-2","GGAGATGATCAATCTT",1,56.54,10.79,0.02,0.1,2.83,1.1,0,"1 nonsynonymous","S147N",1
"lib1","SARS-CoV-2","GGAGATGCAAAGATTG",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y F126S T201G",3
"lib1","SARS-CoV-2","GGAGATGGATAATTTA",11,76.87,6.23,-4.53,0.71,1.5,1.15,0.02,">1 nonsynonymous","A33E T46F I80L D98F N107L N118L F160G",7
"lib1","SARS-CoV-2","GGAGATGGCATCAAAA",5,36.35,6.66,-4.1,0.43,1.5,1.08,0.02,">1 nonsynonymous","C61K Q84K G86A P161G",4
"lib1","SARS-CoV-2","GGAGATGGGAAAAATA",7,58.6,6.12,-4.65,0.45,1.5,1.14,0,">1 nonsynonymous","A89E N110M K132G",3
"lib1","SARS-CoV-2","GGAGATGGTTCACAAA",7,134.37,10.82,0.05,0.06,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAGATGTATTAGTTC",1,8.61,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","D90L W106R K114G P133A",4
"lib1","SARS-CoV-2","GGAGATGTCCAATAAA",3,9.23,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","K48E N92G W106T S184P",4
"lib1","SARS-CoV-2","GGAGATTACAAGCATA",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T P96N N107H",3
"lib1","SARS-CoV-2","GGAGATTACAAGCCAT",4,120.85,10.78,0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGATTCATGAATTA",1,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","GGAGATTGTAGGAACC",3,154.48,10.73,-0.03,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGCAAAACGCAGAC",4,47.43,10,-0.77,0.1,2,1.02,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","GGAGCAAAGTCCATCG",5,13.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34M Y121L",2
"lib1","SARS-CoV-2","GGAGCAAGCCTCCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3Y A105S E141* G166A Y175A",5
"lib1","SARS-CoV-2","GGAGCAAGGTACTGAT",1,12.97,10.86,0.1,0.07,2.93,1,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","GGAGCAATAAAGACTA",3,9.84,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K56S D90L D137A F167T F185A",5
"lib1","SARS-CoV-2","GGAGCAATACGTGACA",6,108.38,10.82,0.06,0.07,2.91,1.04,0,">1 nonsynonymous","N171M L187Y",2
"lib1","SARS-CoV-2","GGAGCACAAAATCCTA",1,19.75,10.27,-0.5,0.07,2.92,1.08,0,"1 nonsynonymous","D90H",1
"lib1","SARS-CoV-2","GGAGCACATAACGGCG",8,124.75,10.79,0.02,0.07,2.86,1.09,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","GGAGCACATCACCGAA",2,31.89,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V32M G155V G172R",3
"lib1","SARS-CoV-2","GGAGCACCAACACTTT",1,1.59,NA,NA,NA,NA,NA,NA,"stop","I88K K114L L122* G155L",4
"lib1","SARS-CoV-2","GGAGCACCAGACCACA",2,24.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D68T R127L G172E",3
"lib1","SARS-CoV-2","GGAGCACCCACGAACT",5,83.47,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W23E R73M",2
"lib1","SARS-CoV-2","GGAGCACCTCAAATCA",4,53.91,8.49,-2.28,0.1,1.78,1.11,0,">1 nonsynonymous","K26L Y165L",2
"lib1","SARS-CoV-2","GGAGCACGTAACATCC",1,14.68,9.65,-1.12,0.24,1.76,1.07,0.02,">1 nonsynonymous","F8S N151H",2
"lib1","SARS-CoV-2","GGAGCATAGGGTATGG",5,174.39,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C61Q P96F C158I",3
"lib1","SARS-CoV-2","GGAGCCAAAACACGCA",2,24.51,10.37,-0.39,0.07,2.84,1.09,0,">1 nonsynonymous","S36H D97W P149D",3
"lib1","SARS-CoV-2","GGAGCCAACAAAACTG",18,236.77,10.75,-0.01,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGCCCAAAGAAGCA",2,0.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","GGAGCCCAATCTTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3I Y50R Q84L Y123S N151A N157* K198I",7
"lib1","SARS-CoV-2","GGAGCCCGACTCAAGC",1,60.23,9.45,-1.32,0.07,2.81,1.09,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","GGAGCCCTACGAACCT",3,46.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T55P L57G N92V A105S G146L",5
"lib1","SARS-CoV-2","GGAGCCGGATGAAATT",1,29.63,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y35I Y50K G83P",3
"lib1","SARS-CoV-2","GGAGCCTCAACGATCA",1,41.21,7.04,-3.72,0.42,1.93,1.21,0.02,">1 nonsynonymous","P54L Y165G",2
"lib1","SARS-CoV-2","GGAGCCTGCTCCGAGT",1,16.15,6,-4.76,2,1.5,1.06,0.04,">1 nonsynonymous","K87V C102R R179M S200A",4
"lib1","SARS-CoV-2","GGAGCCTGGGTTTTCA",12,42.26,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L95W F99L C195F K198R",4
"lib1","SARS-CoV-2","GGAGCGAACCAAAGAG",2,6.02,6,-4.76,2,3,1.03,0.01,">1 nonsynonymous","Y39N D137R Q163C",3
"lib1","SARS-CoV-2","GGAGCGACTACCGGAC",1,6.51,9.51,-1.25,0.36,2.21,1,0.04,">1 nonsynonymous","S41A A81V T85M L122G",4
"lib1","SARS-CoV-2","GGAGCGCAGAACACTA",7,3.89,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib1","SARS-CoV-2","GGAGCGCAGACTAACA",8,92.11,10.63,-0.14,0.06,2.9,1.06,0,">1 nonsynonymous","R27L T100M V173F",3
"lib1","SARS-CoV-2","GGAGCGCCTATAATAG",3,35.43,10.84,0.08,0.09,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAGCTAACAAGACCA",5,32.16,10.67,-0.1,0.08,2.78,1.13,0,">1 nonsynonymous","T55S L122Y",2
"lib1","SARS-CoV-2","GGAGCTAACGATATAG",3,12.21,6.25,-4.51,0.56,1.5,1.08,0.05,">1 nonsynonymous","F99L N107T",2
"lib1","SARS-CoV-2","GGAGCTAAGAACTTGA",1,6.39,10.77,0,0.15,2.8,1.1,0.01,">1 nonsynonymous","V52K I138C Y175S",3
"lib1","SARS-CoV-2","GGAGCTACAAACCAAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G9* F44S A81Q C150P",4
"lib1","SARS-CoV-2","GGAGCTAGATGTACTT",3,27.02,9.1,-1.67,0.23,1.5,1.05,0.03,"1 nonsynonymous","L183C",1
"lib1","SARS-CoV-2","GGAGCTCAATACAATA",2,48.11,10.67,-0.09,0.04,2.95,1.03,0,">1 nonsynonymous","Y39A N120R",2
"lib1","SARS-CoV-2","GGAGCTCGAACGGAAC",6,779.5,9.25,-1.51,0.08,2.23,1.08,0,">1 nonsynonymous","C6M L122D Y143F",3
"lib1","SARS-CoV-2","GGAGCTCTTAGTTAGT",4,41.06,10.46,-0.31,0.04,2.89,1.07,0,">1 nonsynonymous","F44M T55R",2
"lib1","SARS-CoV-2","GGAGCTGAAAACCTAA",17,215.74,10.61,-0.16,0.04,2.93,1.02,0,">1 nonsynonymous","V37K A42H Y50F N171S",4
"lib1","SARS-CoV-2","GGAGCTGATTGTACAT",7,132.8,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","S36P G51V A105W Y119S P177T",5
"lib1","SARS-CoV-2","GGAGCTTTATAGGATA",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K K87L S164D S200V",4
"lib1","SARS-CoV-2","GGAGGAAAAAGCGAGC",2,75.34,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","S43L A81S S129C Y178K",4
"lib1","SARS-CoV-2","GGAGGACTCATACAAG",3,35.33,10.78,0.02,0.1,2.86,1.12,0,">1 nonsynonymous","C61A L122M",2
"lib1","SARS-CoV-2","GGAGGACTCGCAGTCA",3,36.12,6.59,-4.18,0.53,1.5,1.14,0.04,">1 nonsynonymous","F17L C49F",2
"lib1","SARS-CoV-2","GGAGGACTTTACAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","P82* D90S N110I Y119A K132*",5
"lib1","SARS-CoV-2","GGAGGAGAACGAATGT",3,35.49,10.62,-0.15,0.06,2.91,1.02,0,">1 nonsynonymous","Y35V S41T R78H",3
"lib1","SARS-CoV-2","GGAGGAGATTGTGGAA",2,2.73,NA,NA,NA,NA,NA,NA,"stop","N40L V103* D112N P191Y",4
"lib1","SARS-CoV-2","GGAGGAGTAAGATCGT",4,41.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","W106L R124C V173D",3
"lib1","SARS-CoV-2","GGAGGAGTGGACGAAC",3,52.77,9.89,-0.87,0.07,2.87,1.09,0,"1 nonsynonymous","T170Y",1
"lib1","SARS-CoV-2","GGAGGATACATACCAA",7,49.97,8.6,-2.16,0.37,1.5,1.08,0.05,">1 nonsynonymous","V103A T140A",2
"lib1","SARS-CoV-2","GGAGGCACAAATCTGC",1,18.1,10.2,-0.57,0.17,2.35,1.03,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GGAGGCACAGGAACAA",3,11.56,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","L5M P82H K94M R124T P197T",5
"lib1","SARS-CoV-2","GGAGGCCCGCGGTGAA",5,19.72,6.21,-4.55,0.8,1.5,1.29,0.04,">1 nonsynonymous","F99L P133Q",2
"lib1","SARS-CoV-2","GGAGGCCGAGAATGTA",9,136.64,6.93,-3.83,0.35,1.5,1.16,0.02,">1 nonsynonymous","I28M D98S N107W",3
"lib1","SARS-CoV-2","GGAGGCGACTTAGACG",1,47.17,9.82,-0.94,0.09,2.71,1.06,0,">1 nonsynonymous","E141C E154K Q163E",3
"lib1","SARS-CoV-2","GGAGGGATGGAGCTTT",3,73.97,10.74,-0.02,0.03,2.95,1.01,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","GGAGGGCCAATGATTG",5,25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A42C G83C G86S",3
"lib1","SARS-CoV-2","GGAGGGGTCAAGTTAT",4,85.31,10.7,-0.07,0.04,2.87,1.09,0,">1 nonsynonymous","S41R L187T",2
"lib1","SARS-CoV-2","GGAGGGTATAAATAAG",1,34.89,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83V P96H G172Q",3
"lib1","SARS-CoV-2","GGAGGGTATATACGTC",8,76.48,6,-4.76,1.51,1.5,1.19,0.01,">1 nonsynonymous","P161E Q176R",2
"lib1","SARS-CoV-2","GGAGGGTCAAATAATT",3,29.94,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F47N P54K G83I N109V L122Y",5
"lib1","SARS-CoV-2","GGAGGTAACGTGAGCT",4,90.02,6.25,-4.51,0.67,1.5,1.22,0.02,">1 nonsynonymous","E10P I28K A42S D90T Q176L",5
"lib1","SARS-CoV-2","GGAGGTAACTAAACAG",2,15.17,8.94,-1.83,0.29,1.5,1.28,0.05,"1 nonsynonymous","C49A",1
"lib1","SARS-CoV-2","GGAGGTAAGTAAGACC",1,33.01,10.46,-0.3,0.09,2.93,1.05,0,">1 nonsynonymous","K87L P149L",2
"lib1","SARS-CoV-2","GGAGGTAGTTCGAAAG",1,5.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V32T E141S V181S",3
"lib1","SARS-CoV-2","GGAGGTATATGAATTA",2,42.31,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y35S C61N P82A E135S G152N H189N",6
"lib1","SARS-CoV-2","GGAGGTATGCGTGAGT",4,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D G83S A105S P161F",4
"lib1","SARS-CoV-2","GGAGGTCCCATAAGTA",7,55.98,8.83,-1.94,0.34,1.5,1,0.05,">1 nonsynonymous","K56S A105L V182I",3
"lib1","SARS-CoV-2","GGAGGTCCCTTTTGAT",1,35.47,6.65,-4.11,0.55,1.5,1.11,0.04,">1 nonsynonymous","L95Y R124L F167C",3
"lib1","SARS-CoV-2","GGAGGTGAAAGTGACT",5,41.98,10.7,-0.07,0.06,2.93,1.01,0,"1 nonsynonymous","N1W",1
"lib1","SARS-CoV-2","GGAGGTGTAACTATTA",2,23.62,10.78,0.01,0.13,2.91,1.05,0.01,"1 nonsynonymous","K128H",1
"lib1","SARS-CoV-2","GGAGGTTAAAGCAAAT",6,473.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M A145T",2
"lib1","SARS-CoV-2","GGAGGTTAATGACTAG",9,108.7,10.77,0,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGGTTACAGATGAG",4,58.22,6,-4.76,1.46,1.5,1.15,0.01,">1 nonsynonymous","Y21S K48I S53L G152M",4
"lib1","SARS-CoV-2","GGAGGTTTATTTTTGA",2,20.31,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5K L60R C102R Y159C Y165L",5
"lib1","SARS-CoV-2","GGAGGTTTCACTTTTC",3,0.42,NA,NA,NA,NA,NA,NA,"stop","N4M E10C A14S G116* K128W G146T",6
"lib1","SARS-CoV-2","GGAGTAAAATACTAAA",2,54.91,9.97,-0.8,0.07,2.83,1.06,0,">1 nonsynonymous","T3I N110S Y119R",3
"lib1","SARS-CoV-2","GGAGTAAACCTCATAT",5,43.92,10.89,0.12,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGTAAAGAGGAGAA",14,272.28,8.22,-2.55,0.15,1.67,1.15,0.01,">1 nonsynonymous","R27W V65M K87N P177S",4
"lib1","SARS-CoV-2","GGAGTAAATCACCCCA",8,82.77,6,-4.76,1.27,1.5,1.18,0.01,">1 nonsynonymous","C49T Y143I T201E",3
"lib1","SARS-CoV-2","GGAGTAACACGATCTG",6,67.98,10.12,-0.65,0.06,2.92,1,0,">1 nonsynonymous","A33R T63A",2
"lib1","SARS-CoV-2","GGAGTAACCCTATAGG",3,16.18,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N4P S19P K48P V52S E141S",5
"lib1","SARS-CoV-2","GGAGTAAGAAGTCCAA",1,23.91,9.62,-1.15,0.35,1.5,1.2,0.04,"1 nonsynonymous","F12D",1
"lib1","SARS-CoV-2","GGAGTAATCCAAGGAA",9,22.52,7.44,-3.32,0.47,1.5,1.12,0.07,">1 nonsynonymous","G9A K87E C150I G174H",4
"lib1","SARS-CoV-2","GGAGTAATGATAAACA",2,35.3,10.42,-0.35,0.07,2.84,1.12,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","GGAGTAATTAGAAAGT",3,9.7,8.64,-2.13,0.12,1.75,1.04,0,">1 nonsynonymous","A42L W106I R136M T201I",4
"lib1","SARS-CoV-2","GGAGTAATTTTAATTG",1,22.11,10.74,-0.02,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGTACAACAATGAT",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V R124M L131T",3
"lib1","SARS-CoV-2","GGAGTACACCAATGTT",2,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87V K114T P177Q L183S",4
"lib1","SARS-CoV-2","GGAGTACACTCAGACG",6,23.54,6.35,-4.42,0.33,1.96,1.16,0.01,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","GGAGTACAGACTCTCA",5,86.52,6,-4.76,0.6,1.5,1.16,0.01,">1 nonsynonymous","T3R P177V",2
"lib1","SARS-CoV-2","GGAGTACTTTATCGGA",2,10.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I88P V103F L187V",3
"lib1","SARS-CoV-2","GGAGTAGTTTAAAGAT",19,240.52,10.71,-0.05,0.05,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GGAGTATAAGATTAGC",2,7.07,NA,NA,NA,NA,NA,NA,"stop","N4* R27* F62L L122T F156N",5
"lib1","SARS-CoV-2","GGAGTATACCAAAAAG",6,0.93,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib1","SARS-CoV-2","GGAGTATATCAACCAA",2,5.86,6,-4.76,2,3,1.03,0,">1 nonsynonymous","R136V Y165I Y178P",3
"lib1","SARS-CoV-2","GGAGTATGGAAGGGTA",2,87.38,9.66,-1.11,0.1,2.42,1.07,0,">1 nonsynonymous","V37L S129C S139Y",3
"lib1","SARS-CoV-2","GGAGTCAAACTAGTTA",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W T15L Q168A",3
"lib1","SARS-CoV-2","GGAGTCAACGCAGAGA",5,54.31,10.53,-0.24,0.04,2.94,1.03,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","GGAGTCAAGGGTATGC",6,24.52,6.19,-4.57,1.15,1.5,1.19,0.05,">1 nonsynonymous","L57R N107D Y123R F167L",4
"lib1","SARS-CoV-2","GGAGTCACGAATGTAC",5,41.52,7.5,-3.26,0.34,1.5,1.16,0.04,">1 nonsynonymous","G9M E154Y T170P",3
"lib1","SARS-CoV-2","GGAGTCACTCAACTCT",9,1.73,NA,NA,NA,NA,NA,NA,"stop","F99Y E135*",2
"lib1","SARS-CoV-2","GGAGTCATCTACTCGG",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78G D90R F126L T170R",4
"lib1","SARS-CoV-2","GGAGTCATTCAATCGA",4,34.08,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","P161F",1
"lib1","SARS-CoV-2","GGAGTCCACAAGTATC",2,61.69,10.65,-0.12,0.04,2.94,1,0,">1 nonsynonymous","G9Y P149D G196R",3
"lib1","SARS-CoV-2","GGAGTCCATGTCAGTT",3,0.55,NA,NA,NA,NA,NA,NA,"stop","S36* F44H A81P Y93L G101M S184I S200F",7
"lib1","SARS-CoV-2","GGAGTCCTCGTCAAAG",1,8.66,9.02,-1.74,0.17,1.8,1.17,0.02,">1 nonsynonymous","F8S K26R T55F",3
"lib1","SARS-CoV-2","GGAGTCGAGATGACTC",10,213.86,10.51,-0.25,0.05,2.9,1.01,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","GGAGTCGCTATTATGA",14,218.02,9.89,-0.88,0.1,2.25,1.06,0,">1 nonsynonymous","K48Y Y91L",2
"lib1","SARS-CoV-2","GGAGTCTTCCTATGTT",3,44.71,9.9,-0.86,0.05,2.91,1.04,0,"1 nonsynonymous","L125T",1
"lib1","SARS-CoV-2","GGAGTGAAACCCAAAT",1,24.6,10.05,-0.71,0.11,2.24,1.02,0.01,">1 nonsynonymous","W106F V173F V180I",3
"lib1","SARS-CoV-2","GGAGTGAATGCCACAC",6,108.97,10.67,-0.1,0.05,2.9,1.07,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","GGAGTGAGGACATCCG",7,45.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41D N58L N64G I72F T201S",5
"lib1","SARS-CoV-2","GGAGTGATACAAGTAA",2,53.93,10.42,-0.34,0.13,2.88,1.04,0.01,">1 nonsynonymous","Y35L S43F A105W",3
"lib1","SARS-CoV-2","GGAGTGATGAAATTAA",1,19.41,8.5,-2.26,0.34,1.5,1.12,0.04,">1 nonsynonymous","K56L I80M P169T",3
"lib1","SARS-CoV-2","GGAGTGCTGGGTAAAT",7,0,NA,NA,NA,NA,NA,NA,"stop","C61H K87L T100P A105* S113G P149A L183E",7
"lib1","SARS-CoV-2","GGAGTGGCACTAGGAG",3,18.84,6.62,-4.15,0.82,1.5,1.13,0.07,">1 nonsynonymous","D34A D97I Y143P T148R V153G",5
"lib1","SARS-CoV-2","GGAGTGGTAGCTAATA",5,68.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19Q S36T N157A",3
"lib1","SARS-CoV-2","GGAGTGGTGAGAAACC",3,0.37,NA,NA,NA,NA,NA,NA,"stop","S36P A105* F167E T201F",4
"lib1","SARS-CoV-2","GGAGTGTGATGGTTTG",1,67.34,9.94,-0.82,0.04,2.92,1.03,0,">1 nonsynonymous","F62C N118S",2
"lib1","SARS-CoV-2","GGAGTTAAAACGACTA",9,139.25,6.43,-4.33,0.29,1.5,1.17,0.01,">1 nonsynonymous","R78L C158S",2
"lib1","SARS-CoV-2","GGAGTTAAGCTTCGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D97E L187G",3
"lib1","SARS-CoV-2","GGAGTTACGAAATAGA",1,13.04,10.76,0,0.31,2.79,1.09,0.03,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","GGAGTTACTGCAGAGT",5,106.36,9.69,-1.07,0.1,1.99,1.08,0,">1 nonsynonymous","A14I S69M Y91F",3
"lib1","SARS-CoV-2","GGAGTTACTGTCCATG",4,0.42,NA,NA,NA,NA,NA,NA,"stop","R16* Q168I T201*",3
"lib1","SARS-CoV-2","GGAGTTAGATTACTAC",4,41.38,6.8,-3.97,0.46,1.5,1.18,0.03,">1 nonsynonymous","F12Y S41C V77M S129D",4
"lib1","SARS-CoV-2","GGAGTTATCCACCTGA",1,5.05,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","F70E N107R N171I",3
"lib1","SARS-CoV-2","GGAGTTCACACTAGGA",2,6.94,6.85,-3.92,0.34,1.5,1,0,">1 nonsynonymous","Y35I S113W D137T G146M E154D",5
"lib1","SARS-CoV-2","GGAGTTCAGATGGGCT",2,33.31,6,-4.76,0.86,1.5,1.11,0,">1 nonsynonymous","N24W Y143I E154Y",3
"lib1","SARS-CoV-2","GGAGTTCCCTGCCCTT",3,43.7,9.91,-0.86,0.07,1.88,1.09,0,">1 nonsynonymous","K56M L95T N120R",3
"lib1","SARS-CoV-2","GGAGTTCGCTGACGGT",3,18.86,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A42S D59L R136E C158R",4
"lib1","SARS-CoV-2","GGAGTTCTCGTAAATG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","S113* N130L P149T G152N G174T",5
"lib1","SARS-CoV-2","GGAGTTGAATAACTCA",2,55.45,10.85,0.09,0.09,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGAGTTGCCCGGTATG",2,18.16,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L60Y Y93K N151I",3
"lib1","SARS-CoV-2","GGAGTTGGATGAGCCA",4,120.78,10.01,-0.75,0.05,2.78,1,0,">1 nonsynonymous","A14N F160V Q168R P191Y",4
"lib1","SARS-CoV-2","GGAGTTGTTGTTCCCA",1,7.31,9.79,-0.98,0.18,2.18,1,0.01,">1 nonsynonymous","W106R G116P",2
"lib1","SARS-CoV-2","GGAGTTTAACAAACAC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","N30* C61K",2
"lib1","SARS-CoV-2","GGAGTTTAAGACCAGG",1,10.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23P P96M A105I",3
"lib1","SARS-CoV-2","GGAGTTTCAATTGCAG",4,52.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37G T55L D68L N120S Y143I P149W",6
"lib1","SARS-CoV-2","GGATAAAAACTCCTGT",3,28.94,10.6,-0.16,0.06,2.95,1,0,"1 nonsynonymous","N110C",1
"lib1","SARS-CoV-2","GGATAAAACATCGACT",1,9.13,7.54,-3.22,0.19,1.75,1,0,">1 nonsynonymous","I2V A14H R136N T148G Y175L",5
"lib1","SARS-CoV-2","GGATAAAACCAAGGCC",5,0.28,NA,NA,NA,NA,NA,NA,"stop","L131C Y143* T148F",3
"lib1","SARS-CoV-2","GGATAAAACGTAAGTC",3,21.24,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N1R G86E R127A",3
"lib1","SARS-CoV-2","GGATAAAAGGCGAAAC",8,84.29,9.32,-1.44,0.05,2.86,1.08,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GGATAAAAGGTGCCGA",6,22.74,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","G51V I88T V103S",3
"lib1","SARS-CoV-2","GGATAAAATCATATAA",9,111.26,9.3,-1.46,0.09,2.77,1.12,0,">1 nonsynonymous","N120T P149Q",2
"lib1","SARS-CoV-2","GGATAAACAAATTCTG",5,110.63,10.1,-0.66,0.06,2.77,1.04,0,">1 nonsynonymous","A33W F99I",2
"lib1","SARS-CoV-2","GGATAAACATCCCTTT",1,51.23,9.95,-0.81,0.11,2.02,1,0.01,">1 nonsynonymous","N58R Q163P",2
"lib1","SARS-CoV-2","GGATAAAGGCAAGTAT",2,134.7,9.29,-1.47,0.13,1.53,1.13,0.01,">1 nonsynonymous","S36I S41N V52R",3
"lib1","SARS-CoV-2","GGATAAAGTCCTCATG",2,39.6,7.15,-3.61,0.29,1.5,1.09,0.03,">1 nonsynonymous","T3S F17P D68A Y178A",4
"lib1","SARS-CoV-2","GGATAAATCGATTTGA",3,17.4,8.06,-2.71,0.26,1.5,1.02,0.02,">1 nonsynonymous","V52A S113K",2
"lib1","SARS-CoV-2","GGATAACAGCTTACAG",3,37.69,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","L60N R73W K128V",3
"lib1","SARS-CoV-2","GGATAACCAGCCTATA",6,100.95,10.63,-0.14,0.06,2.88,1.07,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","GGATAACGGGAATAGT",5,14.39,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y50Q V103S D112G",3
"lib1","SARS-CoV-2","GGATAACTATACATGG",2,16.1,6.36,-4.4,1.08,1.5,1.4,0.07,">1 nonsynonymous","S41L A89K",2
"lib1","SARS-CoV-2","GGATAAGAATTACGTA",3,46.4,6.06,-4.7,1.34,1.5,1.24,0.03,">1 nonsynonymous","F12Y S19R L60G",3
"lib1","SARS-CoV-2","GGATAAGACCAATAAC",2,11.34,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","C6S Q84L G146E",3
"lib1","SARS-CoV-2","GGATAAGACTTCTGGC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","A18L T63L D97I E135V I142* G155S H189Y",7
"lib1","SARS-CoV-2","GGATAAGAGAAGAATC",5,115.39,10.18,-0.58,0.04,2.85,1.05,0,">1 nonsynonymous","N4T K87V R127G",3
"lib1","SARS-CoV-2","GGATAAGAGACAAACT",5,203.38,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","L125G I142T G172R V173S",4
"lib1","SARS-CoV-2","GGATAAGAGGCATGCG",10,2.89,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","GGATAAGAGTTATTTG",4,57.72,6.19,-4.57,0.49,1.5,1.09,0.01,">1 nonsynonymous","Y93P G101F Y123S Q163F",4
"lib1","SARS-CoV-2","GGATAAGATTCCTTCC",1,40.14,10.19,-0.58,0.07,2.36,1,0,"1 nonsynonymous","G51Y",1
"lib1","SARS-CoV-2","GGATAAGCGCTAAAAG",5,19.54,6,-4.76,1.91,3,1.11,0,">1 nonsynonymous","N58L I104R E141L",3
"lib1","SARS-CoV-2","GGATAAGCTTATAAAC",5,67.97,6,-4.76,1.77,1.5,1.19,0.03,">1 nonsynonymous","Y21R G83N Y175C",3
"lib1","SARS-CoV-2","GGATAAGTAGATCCAA",3,59.07,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D98T R124A S184E",3
"lib1","SARS-CoV-2","GGATAAGTATGTAGGT",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18K D90N",2
"lib1","SARS-CoV-2","GGATAAGTCATGTCTC",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V I88E K94G A105S K114A H189Y",6
"lib1","SARS-CoV-2","GGATAATAAAACGATC",1,33.06,10.65,-0.12,0.06,2.87,1.05,0,">1 nonsynonymous","D98S Q163S",2
"lib1","SARS-CoV-2","GGATAATACAGGACAT",8,28.34,6.31,-4.46,0.38,1.5,1.11,0.01,">1 nonsynonymous","V71W K94Q G146L F156L",4
"lib1","SARS-CoV-2","GGATAATCACTGTATA",2,0.9,NA,NA,NA,NA,NA,NA,"stop","W23* T100Y R127A R136C",4
"lib1","SARS-CoV-2","GGATAATCAGATAACA",1,7.98,10.55,-0.21,0.19,2.77,1.17,0.01,"1 nonsynonymous","V153Y",1
"lib1","SARS-CoV-2","GGATAATCGCAGCAGG",4,56.94,10.83,0.07,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATAATGTTGGTTGG",2,41.44,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Q84N R124S G166L",3
"lib1","SARS-CoV-2","GGATAATTAAACCGCG",4,122.22,10.8,0.04,0.05,2.88,1.07,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","GGATAATTAACACACA",3,18.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A18R R27K L95V C102W",4
"lib1","SARS-CoV-2","GGATAATTCAGCGCAA",9,141.04,9.69,-1.07,0.06,2.75,1.12,0,">1 nonsynonymous","K114I F156T",2
"lib1","SARS-CoV-2","GGATAATTTGCAGTTA",1,96.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L60W S129I G172I",3
"lib1","SARS-CoV-2","GGATACAAAACCATGG",3,32.18,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L5K A42P D137F G155F T201K",5
"lib1","SARS-CoV-2","GGATACAAATAGACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G146* T201N",2
"lib1","SARS-CoV-2","GGATACAAGTAGGTCA",3,30.5,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16E D90S F99R E141D F156T G172H",6
"lib1","SARS-CoV-2","GGATACACACGAGCAT",2,48.44,10.88,0.12,0.11,2.9,1.01,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","GGATACACAGGGTTAG",7,0.48,NA,NA,NA,NA,NA,NA,"stop","C6* D68R",2
"lib1","SARS-CoV-2","GGATACACCGTCAGAC",2,5.41,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L5T K48R A105V C158L T201C",5
"lib1","SARS-CoV-2","GGATACACTATTAACG",1,17.14,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","C6N N58Y V65L R73C F160P",5
"lib1","SARS-CoV-2","GGATACAGATGTGGAC",2,30.1,7.98,-2.79,0.34,1.5,1,0.05,">1 nonsynonymous","I28Q R136S Q144S",3
"lib1","SARS-CoV-2","GGATACAGGCTAGCAG",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D F17S Q79M P149T E186Q",5
"lib1","SARS-CoV-2","GGATACATCGGCTAAA",2,5.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134P",1
"lib1","SARS-CoV-2","GGATACATTAACTGTT",3,31.1,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","A33R D98L Y121T G146V N157Y",5
"lib1","SARS-CoV-2","GGATACCAAAAGGAGT",1,27.77,9.29,-1.47,0.15,2.09,1.03,0.01,">1 nonsynonymous","T3K F44I C61D Y91I I142L",5
"lib1","SARS-CoV-2","GGATACCAAATCAATT",7,58.89,8.37,-2.39,0.33,1.5,1,0.05,">1 nonsynonymous","F44R Y91T",2
"lib1","SARS-CoV-2","GGATACCATCGACCAT",3,15.92,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6V W106I R124K",3
"lib1","SARS-CoV-2","GGATACCATTACATAG",3,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L T15W A33C K56M D68K L125R",6
"lib1","SARS-CoV-2","GGATACCCAGTAAACT",4,19.54,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T55F A89I F99L P149T T201L",5
"lib1","SARS-CoV-2","GGATACCCGAACTCCT",8,125.61,10.75,-0.02,0.05,2.9,1.06,0,"1 nonsynonymous","Q168A",1
"lib1","SARS-CoV-2","GGATACCCGAATATTA",1,20.26,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60K A105D Q163Y Y178S",4
"lib1","SARS-CoV-2","GGATACGACGTATTAG",2,46.26,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","E10Q N92K Y121P E154W",4
"lib1","SARS-CoV-2","GGATACGATAACTTAA",3,71.89,10.16,-0.6,0.06,2.87,1.03,0,">1 nonsynonymous","I2R S41V P169S",3
"lib1","SARS-CoV-2","GGATACGCAAGACTCT",3,7.59,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A42I S69C P82R G146R V153M V173W",6
"lib1","SARS-CoV-2","GGATACGCCCTAGCAA",7,18.75,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F99L R124K",2
"lib1","SARS-CoV-2","GGATACGCGAAACTCC",8,114.8,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F12T S41R D75F T100K Y119A R179Y",6
"lib1","SARS-CoV-2","GGATACGTGATGCGAA",14,85.2,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9T S19M V115S Q168P V181K",5
"lib1","SARS-CoV-2","GGATACTAAAATAAAG",1,22.83,6,-4.76,1.94,3,1.12,0,">1 nonsynonymous","Y35E G83H R124D",3
"lib1","SARS-CoV-2","GGATACTACATAGTCC",2,40.76,10.64,-0.13,0.05,2.95,1.01,0,">1 nonsynonymous","S45A K128T",2
"lib1","SARS-CoV-2","GGATACTACTTTAATA",1,21.43,10.61,-0.16,0.13,2.88,1.12,0.01,"1 nonsynonymous","H189I",1
"lib1","SARS-CoV-2","GGATACTATCCTTTAC",2,24.55,9.81,-0.96,0.13,2.83,1.09,0.01,"1 nonsynonymous","D34C",1
"lib1","SARS-CoV-2","GGATACTCAAGCAGAC",2,36.97,10.63,-0.13,0.09,2.91,1.03,0,">1 nonsynonymous","K132A K198Y",2
"lib1","SARS-CoV-2","GGATACTCCAATATAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","N1* S43Y S113R V180R",4
"lib1","SARS-CoV-2","GGATACTGGTTATTAA",3,29.1,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S69V G83D",2
"lib1","SARS-CoV-2","GGATACTTCGCGATGG",11,11.31,6,-4.76,2,3,1.06,0,">1 nonsynonymous","V52D G116N P133K",3
"lib1","SARS-CoV-2","GGATAGAACTTTAAAA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S F47S D97S N107W K128N G146W",6
"lib1","SARS-CoV-2","GGATAGACGGGATTAC",4,50.63,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37L Y50H F99C N120R L122F T201Q",6
"lib1","SARS-CoV-2","GGATAGATCAATTTTG",1,25.11,10.26,-0.5,0.03,2.93,1.04,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","GGATAGATTTAAGTAC",3,18.93,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S19Y F47I L95F A192D",4
"lib1","SARS-CoV-2","GGATAGCAGCTAGATT",5,4.73,NA,NA,NA,NA,NA,NA,"stop","N1E G9N N109*",3
"lib1","SARS-CoV-2","GGATAGCTAACTATAG",5,90.5,9.97,-0.8,0.1,2.37,1.03,0,">1 nonsynonymous","F99L G152D",2
"lib1","SARS-CoV-2","GGATAGCTACTTTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37I Q144R E154A T170*",4
"lib1","SARS-CoV-2","GGATAGGACTTTTATG",6,46.9,10.55,-0.22,0.1,2.9,1.04,0,">1 nonsynonymous","Q144S K199N",2
"lib1","SARS-CoV-2","GGATAGGCAATCTACT",2,46.22,10.67,-0.1,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATAGGTATGCAAAT",3,5.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y A42Y N120L I142C P149S N171S",6
"lib1","SARS-CoV-2","GGATAGTAAGCTGTAT",4,42.64,9.19,-1.57,0.16,1.93,1.16,0.01,">1 nonsynonymous","S36F N107Q",2
"lib1","SARS-CoV-2","GGATAGTACCATGATG",3,0.18,NA,NA,NA,NA,NA,NA,"stop","D98* Y119S F134D V173S",4
"lib1","SARS-CoV-2","GGATAGTATAAAGGCG",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105V N171V S184T",3
"lib1","SARS-CoV-2","GGATAGTCCATCATTA",7,114.84,9.93,-0.83,0.1,2.37,1.05,0,">1 nonsynonymous","C31F V32H T100V W106R",4
"lib1","SARS-CoV-2","GGATAGTGGACGATTT",1,6.27,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","N92W Y123L",2
"lib1","SARS-CoV-2","GGATAGTTAAGAGATT",7,69.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31S D90L Y143A Q168G",4
"lib1","SARS-CoV-2","GGATAGTTCCGCTTAA",6,64.77,8.85,-1.92,0.11,2.42,1.12,0.01,">1 nonsynonymous","T55Y D90L Q168C",3
"lib1","SARS-CoV-2","GGATATAAAAATGATT",1,14.5,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62S F126P F167L",3
"lib1","SARS-CoV-2","GGATATAAACTATCAC",9,130.3,10.66,-0.11,0.03,2.93,1.03,0,">1 nonsynonymous","S29H G83S",2
"lib1","SARS-CoV-2","GGATATAACCAAACGT",1,25.22,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I2D C31T G146E Q176L",4
"lib1","SARS-CoV-2","GGATATAATACAACGG",4,55.97,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y21F D90R F167L",3
"lib1","SARS-CoV-2","GGATATACAAACAAAT",2,29.77,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N24H F99D",2
"lib1","SARS-CoV-2","GGATATACCAAGTTAC",3,75.28,10.12,-0.64,0.13,2.03,1.04,0.01,">1 nonsynonymous","S36L W106Q I138L A190E",4
"lib1","SARS-CoV-2","GGATATAGCGAGCGGC",7,25.82,6.85,-3.91,0.44,1.5,1.15,0.03,">1 nonsynonymous","D90S L183T",2
"lib1","SARS-CoV-2","GGATATAGGCTAATAT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","F8M Y35A T55* D97F",4
"lib1","SARS-CoV-2","GGATATAGTACTAGAA",5,16.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34Y R136S P161W",3
"lib1","SARS-CoV-2","GGATATAGTGGGTCGC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","F17* K56E G116R",3
"lib1","SARS-CoV-2","GGATATATAATGAGTA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y Y119L F160A T170K V180F P191T",6
"lib1","SARS-CoV-2","GGATATATAGCGGCCA",1,43.49,10.22,-0.54,0.08,2.93,1,0,">1 nonsynonymous","R16P L125I K198V",3
"lib1","SARS-CoV-2","GGATATATAGCGTAAA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N40L D68R D90G P149N",5
"lib1","SARS-CoV-2","GGATATATCACACCCT",11,260.12,10.77,0,0.06,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GGATATCCTTTATTTG",9,60.13,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","G51E L122P A192V",3
"lib1","SARS-CoV-2","GGATATCTGAACATCA",2,66.13,10.78,0.01,0.06,2.82,1.08,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","GGATATGAAGAAAGGG",5,103.48,9.36,-1.4,0.08,2.81,1.11,0,">1 nonsynonymous","I2H G117V",2
"lib1","SARS-CoV-2","GGATATGAAGGAAATG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","P7G S19A D68A T100Y F134*",5
"lib1","SARS-CoV-2","GGATATGCGACCTTAC",1,18.27,10.85,0.08,0.1,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GGATATGTATAGCATA",2,29.07,6.22,-4.55,0.67,1.5,1.14,0.02,">1 nonsynonymous","I2D V37C D59S Y93K",4
"lib1","SARS-CoV-2","GGATATGTCGTTAGAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","E10R R16F S43P K56H V103D L122R Y143* F160T G196V",9
"lib1","SARS-CoV-2","GGATATGTTAATGTGG",3,57.47,10.53,-0.24,0.07,2.91,1,0,">1 nonsynonymous","K56T E141N G152T",3
"lib1","SARS-CoV-2","GGATATTATATTTCTA",4,48.81,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N157I R179F",2
"lib1","SARS-CoV-2","GGATATTCATTATGTA",9,84.36,10.5,-0.26,0.06,2.92,1.01,0,">1 nonsynonymous","F8L V65S",2
"lib1","SARS-CoV-2","GGATATTCCAATCTGG",4,187.29,10.2,-0.56,0.05,2.81,1.03,0,">1 nonsynonymous","K56Q S139I",2
"lib1","SARS-CoV-2","GGATCAAAACAATTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N58I",2
"lib1","SARS-CoV-2","GGATCAAAGTACAAGA",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E G9V N13P L122F N157S T201L",6
"lib1","SARS-CoV-2","GGATCAAGACAATCTG",5,89.6,10.47,-0.29,0.06,2.91,1.06,0,">1 nonsynonymous","A42E L122R G174Q",3
"lib1","SARS-CoV-2","GGATCAATAACGGGTG",2,19.96,10.76,0,0.09,2.87,1.08,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","GGATCAATGTGGACCA",4,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105P Y119V Y175L",3
"lib1","SARS-CoV-2","GGATCACAAAGATTAC",2,33.01,10.78,0.01,0.08,2.82,1.18,0,">1 nonsynonymous","N24S P197L",2
"lib1","SARS-CoV-2","GGATCACAAGAACGCA",1,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A N110A R127F",3
"lib1","SARS-CoV-2","GGATCACAAGAAGACG",8,103.6,6,-4.76,1.43,1.5,1.17,0.01,">1 nonsynonymous","N40L G51C G74A K114T",4
"lib1","SARS-CoV-2","GGATCACAAGAGGAAT",3,95.7,10.76,-0.01,0.06,2.98,1.01,0,"1 nonsynonymous","F160D",1
"lib1","SARS-CoV-2","GGATCACAATTTTGCA",2,61.67,6.49,-4.28,0.41,1.5,1.06,0.02,">1 nonsynonymous","F12L L60F K94L N107G G172I Y175C",6
"lib1","SARS-CoV-2","GGATCACGAAACACTG",4,45.09,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","R25A T46D N130M G152M L183I",5
"lib1","SARS-CoV-2","GGATCAGAGCAACAAG",13,68.71,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A18R D59Q L95C N107P A192G",5
"lib1","SARS-CoV-2","GGATCAGCGGGGGCCA",5,1.03,NA,NA,NA,NA,NA,NA,"stop","F8I S41* D68V R78L D90I S129* E135M",7
"lib1","SARS-CoV-2","GGATCAGGATCTCCCT",2,18,6.01,-4.76,1.57,1.5,1.17,0.05,">1 nonsynonymous","A89Q G101C T148N",3
"lib1","SARS-CoV-2","GGATCAGTGACAAATT",11,156.92,10.25,-0.52,0.06,2.91,1,0,">1 nonsynonymous","N64H K94A E154P",3
"lib1","SARS-CoV-2","GGATCAGTTGAATATC",4,16.24,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","N1F F12L I72R S113H P149R",5
"lib1","SARS-CoV-2","GGATCATACCTAAACA",3,35.47,9.96,-0.8,0.13,2.54,1,0.01,">1 nonsynonymous","L60Q Y91V",2
"lib1","SARS-CoV-2","GGATCATAGAAAGGAC",3,48.39,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9V N107S Y119M I142P",4
"lib1","SARS-CoV-2","GGATCATCAAACCTGA",4,75.74,10.18,-0.58,0.07,2.28,1,0,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","GGATCATCCATCATAA",4,39.68,8.49,-2.28,0.27,1.5,1.07,0.04,">1 nonsynonymous","Y35M V52T V181F",3
"lib1","SARS-CoV-2","GGATCATCTAGTTAAG",1,26.5,10.2,-0.56,0.07,2.81,1,0,">1 nonsynonymous","L38W K87F T201R",3
"lib1","SARS-CoV-2","GGATCATTAACATCTG",5,51.31,10.73,-0.03,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATCATTAACCAATA",2,8.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2L I104K L122V",3
"lib1","SARS-CoV-2","GGATCATTAGATACAT",9,16.06,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S19G W106K V181H",3
"lib1","SARS-CoV-2","GGATCATTGCCAAAAT",4,22.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6S A14E T55M C150A N157Q F167I",6
"lib1","SARS-CoV-2","GGATCATTTATCCAAA",4,66.88,10.54,-0.22,0.05,2.9,1.06,0,">1 nonsynonymous","S139N T201M",2
"lib1","SARS-CoV-2","GGATCCAAAGATGTGT",4,38.03,9.64,-1.13,0.14,2.42,1.05,0.01,"1 nonsynonymous","N107M",1
"lib1","SARS-CoV-2","GGATCCAAGATACCAG",7,155.19,9.79,-0.97,0.07,2.63,1.07,0,">1 nonsynonymous","S19A N171S A190C",3
"lib1","SARS-CoV-2","GGATCCACATATACCT",10,6.9,NA,NA,NA,NA,NA,NA,"stop","W23R T63V S69* R73E",4
"lib1","SARS-CoV-2","GGATCCACCAAAGAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","N1* C6V A42P V71R I138F",5
"lib1","SARS-CoV-2","GGATCCACGTAATGAA",4,71.71,10.71,-0.06,0.06,2.93,1.03,0,"1 nonsynonymous","I138S",1
"lib1","SARS-CoV-2","GGATCCACTAGTAAAC",3,11.39,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","C31F K56H Y91L F99W A105R",5
"lib1","SARS-CoV-2","GGATCCATAATAGGCT",1,38.28,9.79,-0.98,0.14,2.03,1.05,0.01,">1 nonsynonymous","P7I L57Y",2
"lib1","SARS-CoV-2","GGATCCCAATGACCAG",5,26.07,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","T46L N92T T100S Y123A",4
"lib1","SARS-CoV-2","GGATCCCAGTGTAACA",5,54.8,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9R E76S K114N N130C V173G",5
"lib1","SARS-CoV-2","GGATCCCCCTTATATA",2,112.78,10.33,-0.44,0.06,2.88,1.04,0,">1 nonsynonymous","I72L F156I",2
"lib1","SARS-CoV-2","GGATCCCCTGATGGGT",13,3.65,NA,NA,NA,NA,NA,NA,"stop","Y50S V77* G116V T201L",4
"lib1","SARS-CoV-2","GGATCCCTCAAAATAA",4,24.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V71S F126P",2
"lib1","SARS-CoV-2","GGATCCGAGAAAACAA",7,29.37,7.93,-2.84,0.42,1.5,1.14,0.04,">1 nonsynonymous","I2P T63S A81R N107M",4
"lib1","SARS-CoV-2","GGATCCGGCCATAAAG",6,80.75,10.45,-0.32,0.05,2.9,1.01,0,">1 nonsynonymous","A105G K198D",2
"lib1","SARS-CoV-2","GGATCCGTCACACTGG",1,1.9,NA,NA,NA,NA,NA,NA,"stop","G9* A14L K56M A192C",4
"lib1","SARS-CoV-2","GGATCCGTTCGGGTGC",1,0.83,NA,NA,NA,NA,NA,NA,"stop","R27E G74F G117P N157T Q176*",5
"lib1","SARS-CoV-2","GGATCCTAATATACAA",1,12.99,9.94,-0.83,0.13,2.8,1,0.01,">1 nonsynonymous","K26S F44T",2
"lib1","SARS-CoV-2","GGATCCTCTCAGTCCA",2,23.25,10.34,-0.43,0.1,2.09,1.02,0.01,">1 nonsynonymous","L5R N13R K56L D98T",4
"lib1","SARS-CoV-2","GGATCCTGAGCTGTAT",1,8.78,7.05,-3.72,0.38,1.5,1.05,0.07,">1 nonsynonymous","I2M T100I V115R C150S T170R",5
"lib1","SARS-CoV-2","GGATCGAAGATAATAG",2,30.21,10.45,-0.32,0.08,2.9,1.05,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","GGATCGACCGGTGAAA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","P7I L95R Q144*",3
"lib1","SARS-CoV-2","GGATCGAGAAAAGAAA",1,17.84,6.83,-3.93,0.42,1.53,1.32,0.02,">1 nonsynonymous","A14T G86Y A190G",3
"lib1","SARS-CoV-2","GGATCGAGTTAGGTAT",2,21.28,9.59,-1.18,0.09,2.78,1.05,0.01,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","GGATCGATCCATGTTG",2,14.23,6.53,-4.24,0.75,1.5,1.05,0.07,">1 nonsynonymous","Y35K K87G G101M G152I",4
"lib1","SARS-CoV-2","GGATCGCACCAAGTGC",7,26.36,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4M S113M L131E",3
"lib1","SARS-CoV-2","GGATCGCCCAGTAACT",3,18.39,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","P82F Y91L",2
"lib1","SARS-CoV-2","GGATCGCGTAATGATA",1,12.4,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","L38C N107K N157Q T170S",4
"lib1","SARS-CoV-2","GGATCGGAACTCCCTG",11,140.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A K87Y L131K",3
"lib1","SARS-CoV-2","GGATCGTGGAAACATG",14,135.65,10.5,-0.27,0.05,2.88,1.05,0,">1 nonsynonymous","T100L E135S",2
"lib1","SARS-CoV-2","GGATCTAAATAACATA",2,35.07,7.65,-3.12,0.38,1.5,1.11,0.04,">1 nonsynonymous","T15D S29F G83K N118L T201N",5
"lib1","SARS-CoV-2","GGATCTAACCCCCAAT",1,14.42,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F8L S19L F47T",3
"lib1","SARS-CoV-2","GGATCTAATAAGCTAA",1,26.54,10.75,-0.01,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATCTACACACAATA",11,107.71,8.88,-1.88,0.16,1.89,1.14,0.01,">1 nonsynonymous","A14I S129M A145I",3
"lib1","SARS-CoV-2","GGATCTACTAATCGCC",2,17.09,6.71,-4.06,0.48,1.5,1.07,0.03,">1 nonsynonymous","R127E Q168L K198N",3
"lib1","SARS-CoV-2","GGATCTAGGCACATAA",2,15.85,9.03,-1.73,0.17,1.54,1.14,0.02,">1 nonsynonymous","D90G P161S",2
"lib1","SARS-CoV-2","GGATCTATTGTTGGCC",4,25.21,10.29,-0.47,0.08,2.88,1,0,">1 nonsynonymous","R136I S147A",2
"lib1","SARS-CoV-2","GGATCTCACCAAAGGT",6,62.83,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V11R T63P G146Y",3
"lib1","SARS-CoV-2","GGATCTCTCGTCTCCA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9V V37* C61T Y178I",4
"lib1","SARS-CoV-2","GGATCTCTTCACATGC",8,24.67,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T3M D59K P96A T100C D112R K128F D137G",7
"lib1","SARS-CoV-2","GGATCTGACCCAAGGT",5,0.35,NA,NA,NA,NA,NA,NA,"stop","I2* D112*",2
"lib1","SARS-CoV-2","GGATCTGAGCGAACTG",5,85.48,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F44I G86A N130L V153L P169Q",5
"lib1","SARS-CoV-2","GGATCTGATCAATACG",1,15.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25Q G155R L162Y",3
"lib1","SARS-CoV-2","GGATCTTAGGAAAGAC",6,187.92,8.76,-2,0.09,2.54,1.09,0,">1 nonsynonymous","E10Q S41R Y119I",3
"lib1","SARS-CoV-2","GGATCTTGACGAAATA",1,0.53,NA,NA,NA,NA,NA,NA,"stop","S36I C150I F167P G196*",4
"lib1","SARS-CoV-2","GGATCTTTATTGGTCA",4,99.49,8.35,-2.41,0.14,2.88,1.1,0.01,">1 nonsynonymous","I2D N30K F126N A192Y",4
"lib1","SARS-CoV-2","GGATCTTTCTTCCAGG",1,8.19,10.48,-0.29,0.17,2.81,1.13,0.01,"1 nonsynonymous","K56D",1
"lib1","SARS-CoV-2","GGATGAAAACTCTGCG",9,179.75,10.66,-0.11,0.04,2.89,1.04,0,">1 nonsynonymous","G83L N151H T201V",3
"lib1","SARS-CoV-2","GGATGAAACAATCTTC",3,76.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33R C61S S113E Y119F R127C S147P L183I",7
"lib1","SARS-CoV-2","GGATGAAATTGAAGCA",1,5.48,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","I104Q S113R E141L N151I K198T",5
"lib1","SARS-CoV-2","GGATGAACAACTTGAA",8,96.83,10.35,-0.42,0.06,2.88,1.05,0,">1 nonsynonymous","S29R T55S E141P",3
"lib1","SARS-CoV-2","GGATGAACCACAGAAA",2,83.01,10.11,-0.66,0.11,2.67,1.04,0.01,">1 nonsynonymous","K56V K94N",2
"lib1","SARS-CoV-2","GGATGAACCTTTGGAC",1,12.97,10.85,0.08,0.1,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATGAAGAAAAATTC",1,14.54,6.54,-4.22,0.67,1.5,1.32,0.05,">1 nonsynonymous","R27N S45G P96M",3
"lib1","SARS-CoV-2","GGATGAAGAGTCCTGT",3,22.58,8.11,-2.65,0.47,1.5,1.01,0.08,">1 nonsynonymous","N1E F17W W23L L122E",4
"lib1","SARS-CoV-2","GGATGAAGTTTCCACG",9,75.79,10.7,-0.06,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATGAATTCCTAGTT",5,14.42,10.58,-0.18,0.57,1.5,1.15,0.08,">1 nonsynonymous","L5H N13S P96D P133L A145C",5
"lib1","SARS-CoV-2","GGATGACAATGAGGTG",5,52.11,10.05,-0.71,0.11,2.55,1.05,0,">1 nonsynonymous","V11Y S41W",2
"lib1","SARS-CoV-2","GGATGACATGTGTTGT",6,41.69,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C31G D59K P96D Y121Q N157S",5
"lib1","SARS-CoV-2","GGATGACCCTACGGTT",4,42.02,10.84,0.08,0.05,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATGAGAAATACACA",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y35A V52H G117P",4
"lib1","SARS-CoV-2","GGATGAGACACATTGA",2,31.27,6.22,-4.54,0.55,1.5,1.13,0.02,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","GGATGAGCTGACCCAT",4,146.3,10.15,-0.61,0.03,2.91,1.01,0,">1 nonsynonymous","T100K L122C G174H",3
"lib1","SARS-CoV-2","GGATGAGTAAGATTGT",4,81.01,10.37,-0.4,0.04,2.95,1,0,">1 nonsynonymous","F8L R27S P96G A192G",4
"lib1","SARS-CoV-2","GGATGATTCAATACGC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72T",1
"lib1","SARS-CoV-2","GGATGCAAAAAATTAT",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106I P169S",2
"lib1","SARS-CoV-2","GGATGCAAAAACTCCG",3,0,NA,NA,NA,NA,NA,NA,"stop","T148*",1
"lib1","SARS-CoV-2","GGATGCAACAATGGGA",1,96.54,10.74,-0.02,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATGCAAGCGTTTGC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A14D P54L I80V D90Q D97*",5
"lib1","SARS-CoV-2","GGATGCACCATTAAGT",2,17.25,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","L38N D59F T100P",3
"lib1","SARS-CoV-2","GGATGCACCTAAAAAA",5,86.83,6.04,-4.73,0.89,1.5,1.15,0.02,">1 nonsynonymous","Y91S P133T Q176H",3
"lib1","SARS-CoV-2","GGATGCAGACTTAATG",2,10.81,10.12,-0.64,0.12,2.84,1,0.02,">1 nonsynonymous","D98Q G174F",2
"lib1","SARS-CoV-2","GGATGCAGTTAAACAA",10,100.23,10.81,0.04,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATGCATATCTCCTT",4,47.33,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S45D G51I F70S K94S V115P F167Q",6
"lib1","SARS-CoV-2","GGATGCATTACTTATT",1,11.21,10.69,-0.08,0.1,2.85,1.16,0.01,">1 nonsynonymous","C61S T201L",2
"lib1","SARS-CoV-2","GGATGCCATGGGGGTG",3,31.36,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S69L P82R D112R I142T",4
"lib1","SARS-CoV-2","GGATGCCTAGAGATAT",1,7.52,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N4H E10L F44V P133V P149F",5
"lib1","SARS-CoV-2","GGATGCCTTTAGCCGC",4,87.72,10.11,-0.65,0.06,2.61,1.01,0,">1 nonsynonymous","A81S E141L V173D",3
"lib1","SARS-CoV-2","GGATGCGCTTGCATGA",15,2.43,NA,NA,NA,NA,NA,NA,"stop","C49L L95* I104* T201E",4
"lib1","SARS-CoV-2","GGATGCTAAACCGGGT",4,59.2,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","I28V Y35T A89K",3
"lib1","SARS-CoV-2","GGATGCTGATTTGCGG",2,66.88,10.74,-0.02,0.06,2.9,1.04,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","GGATGCTGGGAGCTGA",1,12.23,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R25T A42V G51P G83T I138H V181L",6
"lib1","SARS-CoV-2","GGATGCTTAACACAGT",7,92.55,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A18S N58D G83E S113L N120V N151D F156S",7
"lib1","SARS-CoV-2","GGATGGAAAATGCATC",6,48.81,10.19,-0.57,0.06,2.87,1.03,0,">1 nonsynonymous","S43L A105W",2
"lib1","SARS-CoV-2","GGATGGACAACCTACC",5,0.77,NA,NA,NA,NA,NA,NA,"stop","V37H F62I L125Y Y175*",4
"lib1","SARS-CoV-2","GGATGGACGATTAAAT",2,20.22,6,-4.76,2,1.5,1.15,0.05,"1 nonsynonymous","G172Y",1
"lib1","SARS-CoV-2","GGATGGCCACGAATAT",9,381.96,8.3,-2.47,0.17,2.04,1.11,0.01,">1 nonsynonymous","I28W F44C T55R Q176A",4
"lib1","SARS-CoV-2","GGATGGGTAAGAACAG",2,18.31,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","G9E S19L R25L A42F L125P P161R",6
"lib1","SARS-CoV-2","GGATGGGTTGAAGTAG",6,2.93,NA,NA,NA,NA,NA,NA,"stop","A18E D90* T201D",3
"lib1","SARS-CoV-2","GGATGGTACAGGATCT",5,52.52,9.76,-1.01,0.23,1.54,1.17,0.02,">1 nonsynonymous","P54N W106R",2
"lib1","SARS-CoV-2","GGATGGTACGAACAAC",1,21.68,8.92,-1.85,0.11,2.74,1.07,0.01,">1 nonsynonymous","Y91L N120T",2
"lib1","SARS-CoV-2","GGATGGTACTATAATA",7,64.17,10.74,-0.02,0.08,2.84,1.1,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","GGATGGTTATGCCTCT",2,17.59,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","E10F I80K K114L S164F",4
"lib1","SARS-CoV-2","GGATGTAAGGTGTCTG",6,14.54,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S43K K87L D112F E135P T148M",5
"lib1","SARS-CoV-2","GGATGTACAATACTCT",2,4.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82M",1
"lib1","SARS-CoV-2","GGATGTACCGGCACAA",2,22.76,10.78,0.01,0.08,2.93,1,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","GGATGTAGATGTCCTG",8,1.06,NA,NA,NA,NA,NA,NA,"stop","G9* S29F S41T R73G Y93L A105V",6
"lib1","SARS-CoV-2","GGATGTATCTTTCCTA",2,6.22,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","G101D F134Y G152Q",3
"lib1","SARS-CoV-2","GGATGTATTAACCAGT",5,49.91,8.51,-2.26,0.27,1.5,1.02,0.03,">1 nonsynonymous","D97G R127L",2
"lib1","SARS-CoV-2","GGATGTATTATTACGA",2,34.85,10.13,-0.63,0.1,2.82,1.02,0,">1 nonsynonymous","N13H S53R",2
"lib1","SARS-CoV-2","GGATGTCACTTATTAA",3,22.18,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I80A L95T S147F T148I",4
"lib1","SARS-CoV-2","GGATGTCTAACCAAAA",2,10.73,6.86,-3.9,0.29,1.8,1.26,0.02,">1 nonsynonymous","N4P D112M",2
"lib1","SARS-CoV-2","GGATGTGAAAGAAAAA",4,86.79,6,-4.76,1.56,1.5,1.28,0.03,">1 nonsynonymous","E10M N30V I138F K199S",4
"lib1","SARS-CoV-2","GGATGTGAAATATGAC",10,45.33,6.01,-4.76,1.12,1.5,1.17,0.02,">1 nonsynonymous","D34Y I72K",2
"lib1","SARS-CoV-2","GGATGTGAGGAACTCA",10,28.36,NA,NA,NA,NA,NA,NA,"stop","N1S Q84* P177S",3
"lib1","SARS-CoV-2","GGATGTTCATAGTGGT",1,7.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3K D90P Y175E",3
"lib1","SARS-CoV-2","GGATGTTCTTTCTGAA",2,6.51,6,-4.76,2,1.5,1.21,0.08,">1 nonsynonymous","P82Y C150W L183S K199T",4
"lib1","SARS-CoV-2","GGATGTTGCTTAGTAC",4,97.3,10.68,-0.09,0.04,2.92,1.04,0,"1 nonsynonymous","S43Y",1
"lib1","SARS-CoV-2","GGATGTTTTCGAGACG",4,65.71,6.08,-4.68,0.97,1.5,1.24,0.02,">1 nonsynonymous","L131K P149F Y159N",3
"lib1","SARS-CoV-2","GGATTAAAAAGTACAT",5,73.43,9.51,-1.25,0.08,2.78,1.12,0,">1 nonsynonymous","D59K S113T",2
"lib1","SARS-CoV-2","GGATTAAAAGATGTGA",11,144.3,9.79,-0.97,0.07,2.6,1.04,0,">1 nonsynonymous","C6Y T100R",2
"lib1","SARS-CoV-2","GGATTAAAATCCCTTG",6,42.8,7.67,-3.1,0.31,1.5,1.13,0.04,">1 nonsynonymous","N4D V11N D137E",3
"lib1","SARS-CoV-2","GGATTAAACCAGATGT",1,24.62,10.84,0.08,0.1,2.82,1.08,0,"1 nonsynonymous","T148K",1
"lib1","SARS-CoV-2","GGATTAAAGATGAAAT",2,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V T100S",2
"lib1","SARS-CoV-2","GGATTAAAGGCAACTA",2,8.35,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","S45D A89L D97P Y119A P161L",5
"lib1","SARS-CoV-2","GGATTAAAGTATTCAA",1,32.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89M P96R Y178S",3
"lib1","SARS-CoV-2","GGATTAACACGCAACT",6,80.86,9.92,-0.85,0.06,2.9,1.02,0,">1 nonsynonymous","Y119K N171S",2
"lib1","SARS-CoV-2","GGATTAACCCAAACTA",6,23.55,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","L183G",1
"lib1","SARS-CoV-2","GGATTAACCTCACCGT",9,69.84,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","GGATTAACTGAAATTT",2,44.6,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V71H R127S N171S",3
"lib1","SARS-CoV-2","GGATTAACTTATACCC",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K N120Y E154S P169N S184N",5
"lib1","SARS-CoV-2","GGATTAAGAAATAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y121* N151C",2
"lib1","SARS-CoV-2","GGATTAAGAAATCCAA",3,126.2,10.74,-0.02,0.06,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATTAAGACATGCAG",4,7.62,7.42,-3.35,0.46,1.5,1.04,0.05,">1 nonsynonymous","C61K Y93L G116D A192G",4
"lib1","SARS-CoV-2","GGATTAAGGAAGTCTA",6,30.82,8.66,-2.11,0.24,1.5,1,0.02,">1 nonsynonymous","V37C V77Y A81R D90Q R136S",5
"lib1","SARS-CoV-2","GGATTAATAAAAGAAC",2,69.9,10.45,-0.31,0.04,2.83,1.04,0,">1 nonsynonymous","P7L F44Y",2
"lib1","SARS-CoV-2","GGATTAATCGAAACGT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","N40D S108H Y119*",3
"lib1","SARS-CoV-2","GGATTAATGTCATTTG",15,300.39,10.19,-0.58,0.04,2.81,1.01,0,"1 nonsynonymous","L57H",1
"lib1","SARS-CoV-2","GGATTACAACAAAGGC",1,0.62,NA,NA,NA,NA,NA,NA,"stop","N1S G83L D97Y S139F Y143* F185I",6
"lib1","SARS-CoV-2","GGATTACATCTAACAT",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S L60T I142S G166Y",4
"lib1","SARS-CoV-2","GGATTACGACAAAGAA",2,24.78,9.92,-0.84,0.07,2.82,1.04,0,">1 nonsynonymous","S36P N151C",2
"lib1","SARS-CoV-2","GGATTACGACACTAAC",10,144.66,7.98,-2.78,0.22,1.5,1.11,0.02,">1 nonsynonymous","I2C W23S F156M",3
"lib1","SARS-CoV-2","GGATTACGCGTGCAAC",1,6.23,11.04,0.27,0.71,2.3,1,0.07,">1 nonsynonymous","D34M P82A S129T",3
"lib1","SARS-CoV-2","GGATTACGCTATACGT",5,65.38,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V20R Y35I A42V A105Y F126R",5
"lib1","SARS-CoV-2","GGATTACGTTTCGCCA",15,89.77,8.29,-2.48,0.29,1.5,1.03,0.03,">1 nonsynonymous","V77Q D90L K128I",3
"lib1","SARS-CoV-2","GGATTAGAAACCAACC",4,142.61,10.72,-0.04,0.05,2.94,1.01,0,"1 nonsynonymous","G83Q",1
"lib1","SARS-CoV-2","GGATTAGAATTAAAAA",5,76.31,10.24,-0.52,0.03,2.81,1.06,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","GGATTAGAGGGAGTAA",2,12.7,10.6,-0.17,0.06,2.96,1.04,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","GGATTAGCAAACAACT",5,0.65,NA,NA,NA,NA,NA,NA,"stop","F8A R27T Y119* V180P",4
"lib1","SARS-CoV-2","GGATTAGCTGGAGTGT",5,76.19,10.61,-0.16,0.07,2.85,1.03,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","GGATTAGGATGGTCTG",1,14.43,9.4,-1.36,0.17,2.71,1.2,0.01,">1 nonsynonymous","L5D T46S L125V T170S",4
"lib1","SARS-CoV-2","GGATTAGGTTATAAAC",10,86.42,10.81,0.05,0.06,2.92,1.05,0,"1 nonsynonymous","S147D",1
"lib1","SARS-CoV-2","GGATTAGTACCCCAAA",2,16.43,10.68,-0.09,0.04,2.95,1.03,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","GGATTAGTCGAAAAGG",2,28.42,7.29,-3.47,0.36,1.5,1.19,0.04,">1 nonsynonymous","G9L A105Q A190M",3
"lib1","SARS-CoV-2","GGATTAGTTTACTAAG",3,71.01,10.58,-0.19,0.03,2.9,1.04,0,"1 nonsynonymous","G152Y",1
"lib1","SARS-CoV-2","GGATTATAATTCCTAA",2,7.02,8.6,-2.16,0.25,1.74,1.04,0.02,">1 nonsynonymous","A81S W106S",2
"lib1","SARS-CoV-2","GGATTATACCAGATAA",5,56.26,10.6,-0.17,0.06,2.92,1,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","GGATTATAGACACATA",2,15.57,8.93,-1.83,0.42,1.5,1.08,0.07,">1 nonsynonymous","F17T D98H",2
"lib1","SARS-CoV-2","GGATTATAGCAATGCA",2,12.13,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","C49Q L162K",2
"lib1","SARS-CoV-2","GGATTATATTTTCTAG",2,13.94,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F47Y N92M T201G",3
"lib1","SARS-CoV-2","GGATTATCACCTATTG",3,18.39,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","P54A V71K A89S D137I",4
"lib1","SARS-CoV-2","GGATTATCCACGCTTT",1,1.81,NA,NA,NA,NA,NA,NA,"stop","V37A D97*",2
"lib1","SARS-CoV-2","GGATTATGAAACCCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L F12E D59S D68A",4
"lib1","SARS-CoV-2","GGATTCAAACAGAATA",11,147.89,10.72,-0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATTCAACAAGTACT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","R73* N92I T100V G116T Y123K S129R E141S",7
"lib1","SARS-CoV-2","GGATTCACGCGAGTTT",1,9.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C61D K94L S113F E154G",4
"lib1","SARS-CoV-2","GGATTCACTAACGAAG",2,27.46,10.72,-0.04,0.06,2.9,1.02,0,">1 nonsynonymous","I28Y L57Y N171T L187K",4
"lib1","SARS-CoV-2","GGATTCAGGTAACTCA",2,3.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167M",1
"lib1","SARS-CoV-2","GGATTCATCGCCAATG",2,41.27,10.36,-0.4,0.06,2.88,1.05,0,"1 nonsynonymous","F134T",1
"lib1","SARS-CoV-2","GGATTCCAGCACTTAA",1,0.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","GGATTCCCACACTACA",6,29.23,6.75,-4.01,0.64,1.5,1.12,0.07,">1 nonsynonymous","A42S G51L Q84E N157Y",4
"lib1","SARS-CoV-2","GGATTCCCCGCGAGTA",5,8.61,10.98,0.22,0.11,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATTCCCTCATACTA",12,109.1,6.64,-4.12,0.31,1.5,1.19,0.01,">1 nonsynonymous","P82S K114D S139G",3
"lib1","SARS-CoV-2","GGATTCCTGATTAAAC",2,26.08,10.57,-0.19,0.06,2.94,1.07,0,"1 nonsynonymous","P54G",1
"lib1","SARS-CoV-2","GGATTCGAAGACGTGA",3,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G F160C",2
"lib1","SARS-CoV-2","GGATTCGATAACCCAA",1,11.84,10.77,0,0.1,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGATTCGATCTCACAT",7,0.11,NA,NA,NA,NA,NA,NA,"stop","S19I T46* T85A F134G",4
"lib1","SARS-CoV-2","GGATTCGGTACCATTG",3,14.3,10.66,-0.11,0.08,2.85,1.09,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","GGATTCGTAATATCTA",9,111.22,9.91,-0.85,0.1,1.83,1.07,0,">1 nonsynonymous","N1R S36L G83V",3
"lib1","SARS-CoV-2","GGATTCGTCAAACCCG",2,32.88,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6Y G86Y Y91V A105C E141Q",5
"lib1","SARS-CoV-2","GGATTCGTGAAATCCT",8,36.26,7.48,-3.28,0.42,1.5,1.2,0.07,">1 nonsynonymous","S41Q F70N Y119C F167W",4
"lib1","SARS-CoV-2","GGATTCGTGAACAGCC",7,75.96,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38W R78S Y159C",3
"lib1","SARS-CoV-2","GGATTCTACCTATAAC",3,24.68,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","Y35A Q144S Y165K Y175S",4
"lib1","SARS-CoV-2","GGATTCTTCGCGAACG",1,16.82,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12L I28L F47E G86R N107L R127F P149Q",7
"lib1","SARS-CoV-2","GGATTGAATACTCATA",2,9.36,7.32,-3.44,0.53,1.5,1.17,0.06,">1 nonsynonymous","D34Y F99D S129G",3
"lib1","SARS-CoV-2","GGATTGACTATCGTCA",8,59.56,8.22,-2.55,0.16,2.14,1.18,0.01,">1 nonsynonymous","C61V G146K N151F E186S A192R",5
"lib1","SARS-CoV-2","GGATTGATATATCGTT",6,32.41,NA,NA,NA,NA,NA,NA,"stop","Y35* G74A L95C",3
"lib1","SARS-CoV-2","GGATTGATGAAATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K E135S F160V",3
"lib1","SARS-CoV-2","GGATTGCAGAATAGGA",4,137.72,7.84,-2.92,0.13,1.5,1.12,0.01,">1 nonsynonymous","G9C N13G C61Y N120T T201S",5
"lib1","SARS-CoV-2","GGATTGGAATGGGACA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","G51L W106* E141L",3
"lib1","SARS-CoV-2","GGATTGGATCTTCGGG",2,30.31,10.6,-0.17,0.03,2.89,1.07,0,"1 nonsynonymous","N58K",1
"lib1","SARS-CoV-2","GGATTGGTGTATGTTA",1,9.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36Q Y50T R127D T148G N157L",5
"lib1","SARS-CoV-2","GGATTGGTTAAGGTGT",1,10.61,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","P7S Y35G W106A Y121M",4
"lib1","SARS-CoV-2","GGATTGTAGTAAACCA",3,91.78,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","G172M",1
"lib1","SARS-CoV-2","GGATTGTTAAGGCGAT",1,25.29,9.82,-0.95,0.09,2.71,1.04,0,">1 nonsynonymous","F44L D97C",2
"lib1","SARS-CoV-2","GGATTGTTGTCTACAA",8,82.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35T V103I F167S",3
"lib1","SARS-CoV-2","GGATTTAATAGACTAA",3,62.1,10.29,-0.48,0.05,2.86,1.02,0,">1 nonsynonymous","R27T Y66R N120V T201V",4
"lib1","SARS-CoV-2","GGATTTAATCGCGTGA",2,25.58,10.85,0.09,0.09,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGATTTAATTGAAAAA",1,22.87,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T63E Y93S W106G L122S",4
"lib1","SARS-CoV-2","GGATTTACAAAAAGAG",2,29.98,10.31,-0.46,0.08,2.8,1.03,0,">1 nonsynonymous","A42N Q84C I138S V173K",4
"lib1","SARS-CoV-2","GGATTTACAACTCCCA",2,5.69,6.33,-4.44,0.97,1.5,1.04,0.07,">1 nonsynonymous","N58F I88Y L187F",3
"lib1","SARS-CoV-2","GGATTTACTATAATAC",5,70.66,10.73,-0.03,0.13,2.61,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGATTTACTTATTCCC",3,91.63,9.23,-1.53,0.06,2.8,1.12,0,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","GGATTTAGGAATCATA",12,93.16,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","T46F G83I N92Y",3
"lib1","SARS-CoV-2","GGATTTCAAAACGGTT",2,48.85,9.94,-0.82,0.12,1.93,1.09,0.01,">1 nonsynonymous","A89Y K198T",2
"lib1","SARS-CoV-2","GGATTTCATATGCAAA",3,24.27,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G86D Y121K",2
"lib1","SARS-CoV-2","GGATTTCTTGATACTT",1,12.92,9.76,-1.01,0.12,2.51,1.12,0.01,">1 nonsynonymous","I72T F126M",2
"lib1","SARS-CoV-2","GGATTTGACTTTCTCT",6,155.4,6.07,-4.69,0.73,1.5,1.19,0.01,">1 nonsynonymous","K128Q G146R G166F",3
"lib1","SARS-CoV-2","GGATTTGGTTAAGTGA",2,65.55,8.45,-2.31,0.19,2.96,1.05,0.01,">1 nonsynonymous","S36R S41Y T63V F126N S200C",5
"lib1","SARS-CoV-2","GGATTTTATTCTAAGA",2,22.52,8.62,-2.14,0.14,2.71,1,0.01,"1 nonsynonymous","Y175M",1
"lib1","SARS-CoV-2","GGATTTTCTCTCGCAG",4,49.84,10.66,-0.11,0.04,2.93,1.03,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","GGATTTTGTGACGAAT",4,50.48,10.32,-0.44,0.07,2.87,1.01,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","GGATTTTTAAAATAGA",3,31.92,6,-4.76,2,1.5,1.31,0.03,"1 nonsynonymous","R124D",1
"lib1","SARS-CoV-2","GGATTTTTAAAGACAT",2,49.66,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L60T D68L K128N N151S",4
"lib1","SARS-CoV-2","GGCAAAAAAATTGGAG",7,2.74,NA,NA,NA,NA,NA,NA,"stop","K87L K94* G117H P149M Q168N T201A",6
"lib1","SARS-CoV-2","GGCAAAAAACTTATAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","GGCAAAAAATAACAAT",3,146.97,6,-4.76,1.27,1.5,1.15,0.01,">1 nonsynonymous","N4Y R16G T63R A105R P197R",5
"lib1","SARS-CoV-2","GGCAAAAATTGACAAC",8,54.52,10.72,-0.04,0.09,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAAAACAACAAGTC",11,184.64,10.69,-0.07,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAAAACAACTTACG",1,12.13,8.7,-2.06,0.24,2.59,1.17,0.02,">1 nonsynonymous","N1D K87I Y119H",3
"lib1","SARS-CoV-2","GGCAAAACATAAACGA",1,15.28,7.09,-3.67,0.57,1.8,1.08,0.06,">1 nonsynonymous","T3N N40T D68R V115P N130T",5
"lib1","SARS-CoV-2","GGCAAAACATCAAGAG",3,43.09,10.27,-0.49,0.06,2.79,1.07,0,">1 nonsynonymous","R27P K128V",2
"lib1","SARS-CoV-2","GGCAAAACCCAACATA",6,124.93,10.76,-0.01,0.05,2.94,1.04,0,"1 nonsynonymous","K199I",1
"lib1","SARS-CoV-2","GGCAAAACGCGTATCA",13,2.06,NA,NA,NA,NA,NA,NA,"stop","N13V D98Q F126K G155* F185D",5
"lib1","SARS-CoV-2","GGCAAAACTCCCTAAT",3,3,NA,NA,NA,NA,NA,NA,"stop","N4C A22* D34N Y121*",4
"lib1","SARS-CoV-2","GGCAAAAGAGTTATAA",5,1.59,NA,NA,NA,NA,NA,NA,"stop","Y39R T55L G83R N118*",4
"lib1","SARS-CoV-2","GGCAAAATACGCCACA",5,91.55,10.13,-0.64,0.07,2.68,1.03,0,">1 nonsynonymous","R27T V115L Q144I",3
"lib1","SARS-CoV-2","GGCAAAATAGCCTATC",3,59.71,10.27,-0.5,0.07,2.79,1.03,0,">1 nonsynonymous","N58R P149W",2
"lib1","SARS-CoV-2","GGCAAACAAAGCCACG",2,0,NA,NA,NA,NA,NA,NA,"stop","A42D D68R P82* D90S S108R",5
"lib1","SARS-CoV-2","GGCAAACAAGAAATAA",4,53.15,9.58,-1.19,0.09,2.21,1.07,0,">1 nonsynonymous","N4Q C102L G174K",3
"lib1","SARS-CoV-2","GGCAAACACTTGCTTT",4,78.81,10.28,-0.49,0.04,2.93,1,0,">1 nonsynonymous","N58I T148N",2
"lib1","SARS-CoV-2","GGCAAACAGGTCCCCA",15,157.62,6,-4.76,1.29,1.5,1.14,0,">1 nonsynonymous","D68L I142L",2
"lib1","SARS-CoV-2","GGCAAACAGTAGTTAC",7,0.45,NA,NA,NA,NA,NA,NA,"stop","K56L N110* S129A",3
"lib1","SARS-CoV-2","GGCAAACATTGTGATA",1,19.02,10.46,-0.3,0.07,2.87,1.1,0,">1 nonsynonymous","G9S G116L",2
"lib1","SARS-CoV-2","GGCAAACCAATGACGC",1,16.66,8.88,-1.89,0.13,2.74,1.17,0.01,">1 nonsynonymous","D97Y G117T",2
"lib1","SARS-CoV-2","GGCAAACGATAACCTA",8,4.91,NA,NA,NA,NA,NA,NA,"stop","Y50D F134*",2
"lib1","SARS-CoV-2","GGCAAACGGATCACCT",2,35.73,10.67,-0.1,0.07,2.91,1.04,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","GGCAAACGGATTACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91P V103* K114Q",3
"lib1","SARS-CoV-2","GGCAAACGGTGTAAAA",3,63.47,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S41Y C61E E76T T100I W106D",5
"lib1","SARS-CoV-2","GGCAAACGTAACCAAA",1,1.85,NA,NA,NA,NA,NA,NA,"stop","T55V Y119*",2
"lib1","SARS-CoV-2","GGCAAACGTATGAAAT",2,27.64,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V71G N157Y",2
"lib1","SARS-CoV-2","GGCAAACGTTAAAACA",8,94.92,10.73,-0.03,0.04,2.88,1.07,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","GGCAAACTAAGTGAAA",3,49.13,10.71,-0.06,0.11,2.83,1.13,0.01,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","GGCAAACTGTTCATTA",1,35.03,10.72,-0.04,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAAACTTATGCATA",3,83.56,10.48,-0.28,0.08,2.85,1.03,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","GGCAAAGACACCCGAC",1,9.56,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C6Q A33N K56W Q84H A89F Q144P R179L",7
"lib1","SARS-CoV-2","GGCAAAGACGCCAAAA",2,10.57,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T85D Y91S K132I",3
"lib1","SARS-CoV-2","GGCAAAGACTTAGAAA",4,46.68,9.61,-1.15,0.03,2.9,1.06,0,"1 nonsynonymous","G117S",1
"lib1","SARS-CoV-2","GGCAAAGAGAGACGAA",3,26.49,7.21,-3.56,0.31,1.5,1.21,0.02,">1 nonsynonymous","T3P P54E Y165T",3
"lib1","SARS-CoV-2","GGCAAAGATACCTCAT",1,13.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N T55L A81D P197F",4
"lib1","SARS-CoV-2","GGCAAAGCAACCCGCA",6,64.55,10.3,-0.46,0.04,2.88,1.02,0,">1 nonsynonymous","T46F A105S",2
"lib1","SARS-CoV-2","GGCAAAGCATTTTTAA",1,13.47,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R25M P54H F99G E141C",4
"lib1","SARS-CoV-2","GGCAAAGCGAATGGTT",3,20.86,9.82,-0.94,0.15,2.32,1.12,0.01,"1 nonsynonymous","K94G",1
"lib1","SARS-CoV-2","GGCAAAGCTTAATATC",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R L95R C102M N109P G146R",5
"lib1","SARS-CoV-2","GGCAAAGGACTGGCTA",1,21.78,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33R I80L I88N",3
"lib1","SARS-CoV-2","GGCAAAGGAGTCCCGT",4,62.26,10.7,-0.07,0.06,2.87,1.1,0,"1 nonsynonymous","D97R",1
"lib1","SARS-CoV-2","GGCAAAGGGTGCACAA",3,20.73,6.97,-3.8,0.23,1.5,1.03,0.02,">1 nonsynonymous","G9T Y93R Y119R T140M L162C",5
"lib1","SARS-CoV-2","GGCAAAGGTGGGTACC",2,35.2,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G86L P149L V153D",3
"lib1","SARS-CoV-2","GGCAAAGGTTATACCG",11,473.84,8.23,-2.53,0.12,2.36,1.12,0.01,">1 nonsynonymous","A145V Q176E",2
"lib1","SARS-CoV-2","GGCAAAGGTTCAATTG",3,32.56,10.95,0.18,0.12,2.92,1.03,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","GGCAAAGTAACTAAAC",8,73.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G74V G86I W106T",3
"lib1","SARS-CoV-2","GGCAAATAAACATAAT",8,124.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94S N157T",2
"lib1","SARS-CoV-2","GGCAAATAATGTACCG",8,3.65,NA,NA,NA,NA,NA,NA,"stop","N13* K26M Y39V F44S F70H T140E",6
"lib1","SARS-CoV-2","GGCAAATACTAGCAAG",9,49.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49Y L60V F134M",3
"lib1","SARS-CoV-2","GGCAAATCATACAGCA",7,183.15,6,-4.76,1.48,1.5,1.28,0.03,">1 nonsynonymous","V77G G83L T100P L183W",4
"lib1","SARS-CoV-2","GGCAAATCGAATGCTT",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L Y91V I142Q Q176W",4
"lib1","SARS-CoV-2","GGCAAATCGATTAGTA",3,82.29,10.02,-0.74,0.06,2.57,1.01,0,">1 nonsynonymous","F44C G152S",2
"lib1","SARS-CoV-2","GGCAAATTAAATAGAT",4,45.15,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","L95K N151H T201Y",3
"lib1","SARS-CoV-2","GGCAAATTAAGAGAAA",4,26.8,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","W23F P82S A89M Y119C F167M",5
"lib1","SARS-CoV-2","GGCAAATTACCAACTT",4,84.74,10.57,-0.19,0.04,2.97,1.01,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","GGCAAATTCTTTCGTG",2,55.96,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V32Q V71Y P82S Y91V L122W K199M",6
"lib1","SARS-CoV-2","GGCAAATTGCACTGTT",5,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88A",1
"lib1","SARS-CoV-2","GGCAAATTTATCTAAG",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H I104G G155P P191R",4
"lib1","SARS-CoV-2","GGCAAATTTATTAACG",1,13.49,10.41,-0.35,0.08,2.95,1.01,0,">1 nonsynonymous","E10N L187E",2
"lib1","SARS-CoV-2","GGCAAATTTTAACAAG",3,57.97,9.32,-1.44,0.08,1.68,1.08,0,">1 nonsynonymous","R127G F134L",2
"lib1","SARS-CoV-2","GGCAACAAATCTACTT",21,150.14,9.62,-1.15,0.09,1.89,1.08,0,">1 nonsynonymous","L5Q K48E F99V",3
"lib1","SARS-CoV-2","GGCAACAAGAGAGTAG",1,71.16,9.77,-1,0.03,2.94,1.04,0,"1 nonsynonymous","K87D",1
"lib1","SARS-CoV-2","GGCAACAAGATGATCA",4,99.64,10.75,-0.01,0.06,2.93,1,0,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","GGCAACACCTGAGGAC",9,132.68,10.26,-0.5,0.04,2.86,1.02,0,">1 nonsynonymous","L5K D90L H189C",3
"lib1","SARS-CoV-2","GGCAACACGGTGAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","GGCAACATGAGTAAAC",8,49.86,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L122P N157C L162R",3
"lib1","SARS-CoV-2","GGCAACCCCAATTCGT",4,40.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8A F99P",2
"lib1","SARS-CoV-2","GGCAACCGAGGCGCCG",6,46.07,9.93,-0.83,0.07,2.63,1.05,0,">1 nonsynonymous","V32A G152P",2
"lib1","SARS-CoV-2","GGCAACCGCGCTGCCA",3,17.77,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F44Y K94E P133S F167M",4
"lib1","SARS-CoV-2","GGCAACCTTGGGCAAC",3,9.97,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6I S41L K48A A145Q G155A",5
"lib1","SARS-CoV-2","GGCAACGAGACTTATT",4,93.1,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R25F P96E",2
"lib1","SARS-CoV-2","GGCAACGCAATTGTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35I N110V K198* T201Q",4
"lib1","SARS-CoV-2","GGCAACGCACTACCGT",9,56.99,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","V37E V65H V77N",3
"lib1","SARS-CoV-2","GGCAACGCCTCACTGT",4,15.42,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T3Y A18L Y91P V103S",4
"lib1","SARS-CoV-2","GGCAACGGATATTATA",8,47.3,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A89R D97K Q144Y",3
"lib1","SARS-CoV-2","GGCAACGGTATTTAAG",5,0.46,NA,NA,NA,NA,NA,NA,"stop","S45* R136G Q168M",3
"lib1","SARS-CoV-2","GGCAACGTGGTTCTTT",3,49.9,10.58,-0.18,0.05,2.92,1.01,0,">1 nonsynonymous","G9Y S45T N171I",3
"lib1","SARS-CoV-2","GGCAACTCGGTACCTA",4,112.78,9.83,-0.93,0.1,2.24,1.04,0,">1 nonsynonymous","F8C T148S",2
"lib1","SARS-CoV-2","GGCAACTGAAATAAAT",9,60.52,6,-4.76,0.94,1.5,1.15,0.02,">1 nonsynonymous","W23F V37W C150R",3
"lib1","SARS-CoV-2","GGCAACTGCCACGACA",4,54.23,10.09,-0.67,0.07,2.75,1.01,0,">1 nonsynonymous","Y35C T148G",2
"lib1","SARS-CoV-2","GGCAACTTAGGATAAA",4,102.81,10.29,-0.47,0.05,2.86,1,0,">1 nonsynonymous","I2N S139V",2
"lib1","SARS-CoV-2","GGCAACTTGATAAACA",4,31.64,6,-4.76,2,1.93,1.28,0.01,"1 nonsynonymous","R124C",1
"lib1","SARS-CoV-2","GGCAAGAAGTGACATC",3,82.06,9.97,-0.79,0.05,2.78,1.05,0,">1 nonsynonymous","A18C P169S",2
"lib1","SARS-CoV-2","GGCAAGACCAAGGTAA",3,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M G116L",2
"lib1","SARS-CoV-2","GGCAAGACTAAGGTCA",4,40.07,8.63,-2.13,0.14,2.95,1.02,0.01,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","GGCAAGATACAGTGAG",4,29.72,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5G V77K Q84L N107A G172K",5
"lib1","SARS-CoV-2","GGCAAGCACTTGATTG",5,63.79,10.77,0.01,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAAGCTATGCATAC",4,45.75,8.68,-2.08,0.11,2.78,1.11,0.01,"1 nonsynonymous","S113K",1
"lib1","SARS-CoV-2","GGCAAGGGAATAATTC",3,47.82,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F12L N24T I88T Y119R I142Y",5
"lib1","SARS-CoV-2","GGCAAGGGACATAGCA",1,5.99,6.41,-4.35,0.82,1.5,1.24,0.06,">1 nonsynonymous","V103L L122N Y143F Q163S",4
"lib1","SARS-CoV-2","GGCAAGGTAATATGTA",4,19.93,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A42R V65R I80S D112F R127M P149L E154D",7
"lib1","SARS-CoV-2","GGCAAGTACGCAGTTG",2,86.42,10.7,-0.06,0.04,2.91,1.06,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GGCAAGTAGACAAACT",2,11.68,10.2,-0.56,0.13,2.73,1,0.01,">1 nonsynonymous","S45V N151G",2
"lib1","SARS-CoV-2","GGCAAGTCTTCCGCTT",1,1.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","GGCAAGTGCTTAAGAT",2,12.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5S F62M E76K P96Q I142F P177N",6
"lib1","SARS-CoV-2","GGCAATAAAATAGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L R25V G116V",3
"lib1","SARS-CoV-2","GGCAATAAACATACAT",1,0.71,NA,NA,NA,NA,NA,NA,"stop","L60Y G116A T148*",3
"lib1","SARS-CoV-2","GGCAATAACAAGTACA",4,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N A81H Y121T K132Y",4
"lib1","SARS-CoV-2","GGCAATAACAATAAAC",3,0.36,NA,NA,NA,NA,NA,NA,"stop","F8C V37T W106*",3
"lib1","SARS-CoV-2","GGCAATAATTTTCAAA",5,3.72,NA,NA,NA,NA,NA,NA,"stop","L5V A42P T55* F99Y Y123G T148G",6
"lib1","SARS-CoV-2","GGCAATACGTCCTTCC",6,57.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40E D59L G101N",3
"lib1","SARS-CoV-2","GGCAATAGAGATGTCA",6,18.34,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F17P L60V V103F",3
"lib1","SARS-CoV-2","GGCAATATATATTATT",5,65.62,10.73,-0.03,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAATCAAGAATCAG",4,50.03,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K48R L60S I88F G116T R136P I142L G174S",7
"lib1","SARS-CoV-2","GGCAATCAAGCCTCCG",8,4.71,NA,NA,NA,NA,NA,NA,"stop","N64W D90N K132* Q168M",4
"lib1","SARS-CoV-2","GGCAATCTTACCACTT",1,0.29,NA,NA,NA,NA,NA,NA,"stop","T55G K94L Y119S C158L Y175*",5
"lib1","SARS-CoV-2","GGCAATGAACAAACAT",5,94.3,9.86,-0.9,0.09,2.24,1.02,0,">1 nonsynonymous","S36L A105Y E141D",3
"lib1","SARS-CoV-2","GGCAATGACTCCATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54N A81E G86K N92S P149M N157P",6
"lib1","SARS-CoV-2","GGCAATGATAAATAGT",10,254.4,9.74,-1.02,0.04,2.84,1.08,0,">1 nonsynonymous","V52L T170H",2
"lib1","SARS-CoV-2","GGCAATGTGATGTATT",3,14.63,6,-4.76,2,3,1.04,0,">1 nonsynonymous","D68E G83E K128P",3
"lib1","SARS-CoV-2","GGCAATTAGCACTCGT",1,9.73,10.72,-0.04,0.07,2.94,1.03,0,">1 nonsynonymous","P7A G196H",2
"lib1","SARS-CoV-2","GGCAATTAGCAGAGTT",4,2.39,NA,NA,NA,NA,NA,NA,"stop","L95H E135*",2
"lib1","SARS-CoV-2","GGCAATTGTACGGCAA",2,16.45,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F8L C31S C49A V77R Y91F",5
"lib1","SARS-CoV-2","GGCAATTGTCTTAACA",2,33.2,10.53,-0.24,0.06,2.9,1,0,">1 nonsynonymous","L5M A14R K56S",3
"lib1","SARS-CoV-2","GGCAATTTTAACACTA",2,64.33,10.25,-0.51,0.08,2.41,1.02,0,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","GGCACAAGATAGTACC",5,17,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","V37M Y93N S113G L122V",4
"lib1","SARS-CoV-2","GGCACAATAATATCAC",6,105.11,10.12,-0.65,0.06,2.66,1.04,0,"1 nonsynonymous","R127G",1
"lib1","SARS-CoV-2","GGCACAATTGGACTAT",1,31.03,9.14,-1.63,0.17,1.6,1.09,0.01,">1 nonsynonymous","D34K P133N",2
"lib1","SARS-CoV-2","GGCACACAAAATGAAT",4,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G A18L S41L G86F",4
"lib1","SARS-CoV-2","GGCACACAAACGTGTC",2,50.92,10.25,-0.51,0.04,2.79,1,0,">1 nonsynonymous","A14D A33P",2
"lib1","SARS-CoV-2","GGCACACAATCACAAC",2,28.28,10.54,-0.22,0.11,2.92,1.01,0,">1 nonsynonymous","A33L C61L",2
"lib1","SARS-CoV-2","GGCACACACACTACAC",4,5.45,6.89,-3.88,0.61,1.54,1,0.05,">1 nonsynonymous","A105G C158G V181Y",3
"lib1","SARS-CoV-2","GGCACACATATATAGC",11,53.53,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I80F T100P R127F V173F",4
"lib1","SARS-CoV-2","GGCACACATGTTAAAT",1,24.64,6.09,-4.68,0.59,1.5,1.15,0.01,">1 nonsynonymous","V37A I80S N107M V173L",4
"lib1","SARS-CoV-2","GGCACACGACAAACAA",6,59.94,10.19,-0.58,0.08,2.16,1.03,0,">1 nonsynonymous","D90H D97V K132S",3
"lib1","SARS-CoV-2","GGCACACGTATAACCA",7,122.89,8.6,-2.17,0.1,2.76,1.05,0,">1 nonsynonymous","F8Y G117D E154I",3
"lib1","SARS-CoV-2","GGCACACTAAGCAATT",7,28.13,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S45C Y50L D68V T85L Y93V G117L S164F E186G",8
"lib1","SARS-CoV-2","GGCACACTATCTACAG",9,51.16,6,-4.76,1.94,1.5,1.16,0.01,">1 nonsynonymous","T63W F70M S139N F167H Y175G",5
"lib1","SARS-CoV-2","GGCACACTGGCCTCCA",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46M K56Y R124H T148G N171S",5
"lib1","SARS-CoV-2","GGCACACTTAAGCACG",10,61.43,10.72,-0.04,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCACAGAGAAGCTTT",5,0.42,NA,NA,NA,NA,NA,NA,"stop","A14T Y50P W106C R127G E141I Q176* T201A",7
"lib1","SARS-CoV-2","GGCACAGCACCATAGG",5,116.38,10.61,-0.16,0.06,2.85,1.1,0,">1 nonsynonymous","Y39R R78D",2
"lib1","SARS-CoV-2","GGCACAGGAGTCAATG",11,47.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6A E76S G152A",3
"lib1","SARS-CoV-2","GGCACATAACTCAACG",8,23.28,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C6F S41R G86K L95N L122S S129T P149R",7
"lib1","SARS-CoV-2","GGCACATACGTTGAAC",1,16.56,10.57,-0.19,0.06,2.95,1.04,0,"1 nonsynonymous","P191F",1
"lib1","SARS-CoV-2","GGCACATATCCACAAT",8,102.05,8.49,-2.28,0.15,1.5,1.1,0.01,">1 nonsynonymous","Y35N Y91M E154G",3
"lib1","SARS-CoV-2","GGCACATGAAAAAATT",3,15.91,6,-4.76,2,1.5,1.18,0.08,">1 nonsynonymous","E10I T46N P96E",3
"lib1","SARS-CoV-2","GGCACATGAATCATTT",6,91.45,7.72,-3.04,0.15,1.56,1.16,0.01,">1 nonsynonymous","Y119K Y165C",2
"lib1","SARS-CoV-2","GGCACATTCAAAACAG",4,20.42,9.81,-0.95,0.13,2.51,1.07,0.01,">1 nonsynonymous","R27M D90S T100M P169L",4
"lib1","SARS-CoV-2","GGCACATTTGCCCGGT",1,17.03,6,-4.76,1.45,1.5,1.05,0.03,">1 nonsynonymous","N4S S29V W106S F167Q",4
"lib1","SARS-CoV-2","GGCACCAACCACGTAG",8,110.19,10.57,-0.19,0.05,2.93,1.02,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","GGCACCAACTCATAAT",6,96.43,10.04,-0.73,0.08,2.43,1.03,0,">1 nonsynonymous","L57P S184Y S200Y",3
"lib1","SARS-CoV-2","GGCACCAATACGGACC",2,43.93,8.14,-2.63,0.23,1.5,1.1,0.02,">1 nonsynonymous","C31D L57E N120H",3
"lib1","SARS-CoV-2","GGCACCACAATTTATA",2,10.73,6.9,-3.86,0.16,1.83,1.11,0,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","GGCACCACCTAGGCCT",4,69.42,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","N92K Q176E",2
"lib1","SARS-CoV-2","GGCACCAGTAAGCTAT",4,37.87,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F17T R179M T201G",3
"lib1","SARS-CoV-2","GGCACCCAAGCACCAT",2,44.15,10.71,-0.06,0.05,2.98,1,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","GGCACCCCAAAAAGTG",2,34.18,10.23,-0.54,0.07,2.92,1,0,">1 nonsynonymous","T55K F62R",2
"lib1","SARS-CoV-2","GGCACCCGTTTAACAT",5,9.62,NA,NA,NA,NA,NA,NA,"stop","I2D S69* Y91W D97F C102R",5
"lib1","SARS-CoV-2","GGCACCGCCGCAAGGT",4,0.35,NA,NA,NA,NA,NA,NA,"stop","S19C Y21* N64A C150Q S200W",5
"lib1","SARS-CoV-2","GGCACCGCGAAAACTC",10,197.52,10.43,-0.34,0.06,2.93,1.02,0,"1 nonsynonymous","F156H",1
"lib1","SARS-CoV-2","GGCACCGGGCTTCATA",1,66.6,10.67,-0.1,0.07,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCACCTTTACAGACA",1,5.4,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N24P D97V N120S S129L P161V",5
"lib1","SARS-CoV-2","GGCACGAAGGCAGACG",3,78.91,8.66,-2.1,0.12,1.78,1.13,0.01,">1 nonsynonymous","A105S Y165L",2
"lib1","SARS-CoV-2","GGCACGAATTGAGAAC",4,19.1,10.18,-0.59,0.17,2.03,1,0.01,">1 nonsynonymous","A22T V52A K87R T100S K198S",5
"lib1","SARS-CoV-2","GGCACGAGCCCTATCC",2,37.52,6.25,-4.51,0.58,1.52,1.21,0.01,">1 nonsynonymous","T85L Y123K G146K F160I",4
"lib1","SARS-CoV-2","GGCACGATTCCCCGAG",4,33.93,6.08,-4.69,0.47,2.67,1.13,0.01,">1 nonsynonymous","S41E D90T L122Y S129K I142Q G174E K199C",7
"lib1","SARS-CoV-2","GGCACGCAAAACGGTC",5,126.16,10.7,-0.06,0.04,2.96,1.02,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","GGCACGCTACATATTA",4,93.86,10.41,-0.36,0.05,2.85,1.02,0,">1 nonsynonymous","A89T I104M",2
"lib1","SARS-CoV-2","GGCACTAAAGATTATA",3,85.91,8.8,-1.96,0.09,2.51,1.1,0,">1 nonsynonymous","S53L C61M D97H S113T",4
"lib1","SARS-CoV-2","GGCACTAAAGGTCCCG",1,3.16,NA,NA,NA,NA,NA,NA,"stop","G9* T55L G83I D90L T140W",5
"lib1","SARS-CoV-2","GGCACTAACTTTAGAT",1,19.39,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9L G166Y G172V",3
"lib1","SARS-CoV-2","GGCACTACCACCGACA",5,23.72,6,-4.76,2,1.5,1.1,0.01,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","GGCACTATCCCAGGGT",1,59.54,9.86,-0.91,0.09,2.08,1.05,0,">1 nonsynonymous","F8S T201L",2
"lib1","SARS-CoV-2","GGCACTCACAGTCAAC",11,165.56,10.17,-0.59,0.04,2.92,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","GGCACTCACTCATATA",4,102.35,10.14,-0.62,0.07,2.92,1,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","GGCACTCCCGCAAATC",2,57.4,10.31,-0.46,0.06,2.79,1.07,0,">1 nonsynonymous","F44D K128Y",2
"lib1","SARS-CoV-2","GGCACTCGGATCCCGA",1,5.32,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","L5R F44D F47V D112L Y119P",5
"lib1","SARS-CoV-2","GGCACTCTTATTGCCG",5,83.17,9.93,-0.84,0.08,2.63,1.03,0,">1 nonsynonymous","C61I S69F",2
"lib1","SARS-CoV-2","GGCACTGGTTGATCCA",1,28.02,10.77,0,0.11,2.76,1.07,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","GGCACTGTAACCGACT",2,1.7,NA,NA,NA,NA,NA,NA,"stop","S19V P82* N157E",3
"lib1","SARS-CoV-2","GGCACTTCACGGACTA",5,33.51,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C49W P161H",2
"lib1","SARS-CoV-2","GGCACTTCAGGTACGC",2,4.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8N",1
"lib1","SARS-CoV-2","GGCACTTTCAATGACC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","GGCAGAAAACGTCAAA",13,91.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3A N30A A105K T201M",4
"lib1","SARS-CoV-2","GGCAGAAACTGAATCC",6,66.9,10.76,0,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAGAACACCCGGTC",7,131.47,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R25P V37L Q79K V153W",4
"lib1","SARS-CoV-2","GGCAGAACCCAGTAAA",1,16.97,9.82,-0.95,0.07,2.97,1.01,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","GGCAGAACTAGCCCCC",6,16.8,6.15,-4.61,0.96,1.5,1.11,0.05,">1 nonsynonymous","P82Y Q144L",2
"lib1","SARS-CoV-2","GGCAGAATGATGAAAT",3,56.43,9.93,-0.84,0.1,2.36,1.06,0,">1 nonsynonymous","N1L E10V Y119L P149L Q168W P197L",6
"lib1","SARS-CoV-2","GGCAGACAATACGGGT",2,109.71,9.65,-1.11,0.04,2.83,1.06,0,">1 nonsynonymous","K56E P149L T170R",3
"lib1","SARS-CoV-2","GGCAGACACCTTTAAT",3,83.3,10.72,-0.05,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAGACATATAAGAT",9,67.45,10.72,-0.04,0.05,2.93,1.01,0,">1 nonsynonymous","I2M Y91L",2
"lib1","SARS-CoV-2","GGCAGACGGCATTGGG",6,69.89,10.59,-0.18,0.04,2.96,1,0,"1 nonsynonymous","A67V",1
"lib1","SARS-CoV-2","GGCAGAGTCTCTATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26H A42Y S108D P149* E154R",5
"lib1","SARS-CoV-2","GGCAGATATTAGCTAG",4,25.76,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y50C G101S E141L P161L",4
"lib1","SARS-CoV-2","GGCAGATGAGGCTAAA",2,25.76,8.61,-2.15,0.2,2.26,1.01,0.01,">1 nonsynonymous","V77T Y119S Q168T",3
"lib1","SARS-CoV-2","GGCAGATGCCAAAAAA",2,51.29,10.8,0.04,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCAGATGTGAATGAC",5,55.38,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V52T Y93R N107T K114R R136Y",5
"lib1","SARS-CoV-2","GGCAGCAAATAGGAGG",4,42.15,9.73,-1.03,0.08,2.81,1.07,0,">1 nonsynonymous","T55C T148D G174Q",3
"lib1","SARS-CoV-2","GGCAGCAACTTTCCCC",10,1.54,NA,NA,NA,NA,NA,NA,"stop","A192*",1
"lib1","SARS-CoV-2","GGCAGCACCTAGGCCG",1,17.26,10.63,-0.13,0.06,2.89,1.09,0,"1 nonsynonymous","G9P",1
"lib1","SARS-CoV-2","GGCAGCACTCACTATC",1,19.25,9.85,-0.91,0.08,2.8,1.15,0,"1 nonsynonymous","E154I",1
"lib1","SARS-CoV-2","GGCAGCAGGTATTTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","I88D T201*",2
"lib1","SARS-CoV-2","GGCAGCATAAATTAAG",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20P F62M V71R T100F",4
"lib1","SARS-CoV-2","GGCAGCATACGAGCAT",1,125.28,9.93,-0.83,0.06,2.76,1.04,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","GGCAGCATTTTTACAA",5,21.65,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14H N64W C102G G146L",4
"lib1","SARS-CoV-2","GGCAGCCAAGTCCGAA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","G83L T85* Y91H A105T S113C P133L F156P A192V",8
"lib1","SARS-CoV-2","GGCAGCCTAAAGAAAA",6,61.31,9.6,-1.16,0.21,1.81,1.12,0.02,">1 nonsynonymous","R136V T148P",2
"lib1","SARS-CoV-2","GGCAGCCTCAGAACCT",6,102.91,9.42,-1.34,0.08,2.5,1.1,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","GGCAGCGTAACTCTCA",3,52.54,9,-1.77,0.14,1.98,1.09,0.01,">1 nonsynonymous","A105H K114D",2
"lib1","SARS-CoV-2","GGCAGCTTAACAAGTC",4,39,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98Y N107D E141M",3
"lib1","SARS-CoV-2","GGCAGGAATATGAAAG",2,7.77,10.75,-0.01,0.11,2.8,1.21,0,">1 nonsynonymous","T3S N64E",2
"lib1","SARS-CoV-2","GGCAGGACTCGAGAAT",2,58.83,6,-4.76,1.64,1.5,1.2,0.02,">1 nonsynonymous","T46V K114G N120R E141G Y175S",5
"lib1","SARS-CoV-2","GGCAGGAGCTGTCCCT",4,74.87,6,-4.76,2,3,1.19,0,"1 nonsynonymous","V180W",1
"lib1","SARS-CoV-2","GGCAGGATGCCATCAG",2,34.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17P N64K D90G F134I H189C",5
"lib1","SARS-CoV-2","GGCAGGCAACATCCAA",3,18.85,6.03,-4.73,0.77,1.5,1.11,0.01,">1 nonsynonymous","N1Y V37K A89L L131M",4
"lib1","SARS-CoV-2","GGCAGGCCTTACCACG",11,120.15,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44A E135K R179T",3
"lib1","SARS-CoV-2","GGCAGGCGGATGACGC",3,0.36,NA,NA,NA,NA,NA,NA,"stop","S53P D98* Q163R",3
"lib1","SARS-CoV-2","GGCAGGGAAAATCTTC",3,89.45,7.36,-3.4,0.08,1.63,1.11,0,">1 nonsynonymous","C61V R73P V115C",3
"lib1","SARS-CoV-2","GGCAGGGGATACTAAA",1,27.88,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y35D K48I V77G K94S W106T N118K",6
"lib1","SARS-CoV-2","GGCAGGTAGGAACATG",1,7.36,7,-3.76,0.33,1.96,1.08,0.01,">1 nonsynonymous","Y119L T148S G155I",3
"lib1","SARS-CoV-2","GGCAGGTGTTACTTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35C G51S N120D Y175*",4
"lib1","SARS-CoV-2","GGCAGTACAGTGAATG",3,28.47,10.46,-0.31,0.09,2.78,1.22,0,"1 nonsynonymous","K114F",1
"lib1","SARS-CoV-2","GGCAGTAGTTTCACTT",2,16.17,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F12S C49A Q84A N130I E141C N157L",6
"lib1","SARS-CoV-2","GGCAGTATCATGATCA",6,162.25,6.58,-4.19,0.41,1.5,1.17,0.02,"1 nonsynonymous","G172D",1
"lib1","SARS-CoV-2","GGCAGTATTTTCCCGT",7,83.77,10.26,-0.5,0.04,2.82,1.02,0,">1 nonsynonymous","F17Y F44Y",2
"lib1","SARS-CoV-2","GGCAGTCATGTCAGCC",1,14.21,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S69L N92T",2
"lib1","SARS-CoV-2","GGCAGTCCACTAAACG",2,10.25,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I2P R16N Y93L C150S",4
"lib1","SARS-CoV-2","GGCAGTCCGGCGACGA",4,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q N13V N40P S139H T201S",5
"lib1","SARS-CoV-2","GGCAGTCGTGAGTTAG",2,32.23,10.74,-0.03,0.06,2.95,1.02,0,"1 nonsynonymous","Q84T",1
"lib1","SARS-CoV-2","GGCAGTGAAATCGGAC",3,37.23,6,-4.76,1.85,1.5,1.28,0.02,">1 nonsynonymous","D68K G83R",2
"lib1","SARS-CoV-2","GGCAGTGACTCCCACT",1,36.45,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","F44S K87A N107T L162V",4
"lib1","SARS-CoV-2","GGCAGTTACGATTTTT",4,111.99,8.45,-2.31,0.16,1.78,1.12,0.01,">1 nonsynonymous","N107I T148L",2
"lib1","SARS-CoV-2","GGCAGTTGCACTGTAG",2,22.13,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","T55V D98R W106T",3
"lib1","SARS-CoV-2","GGCAGTTTCCAACTGA",3,11.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1P C49G D112Y Q176S",4
"lib1","SARS-CoV-2","GGCATAACAAACCTAG",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H E10G T46N Q84L N157Y",5
"lib1","SARS-CoV-2","GGCATAACACTTTTCT",4,3.61,NA,NA,NA,NA,NA,NA,"stop","G9P A14* N64H Y165I",4
"lib1","SARS-CoV-2","GGCATAAGGATTCACG",8,37.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8N Y91F W106R C158N",4
"lib1","SARS-CoV-2","GGCATAATAGCATAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","L60Y P96* F156Y A190T K199L",5
"lib1","SARS-CoV-2","GGCATACAACAACATT",3,56.34,9.46,-1.3,0.15,1.97,1.11,0.01,">1 nonsynonymous","Y21E Q168A",2
"lib1","SARS-CoV-2","GGCATACAATAAAATA",3,44.29,10.46,-0.31,0.05,2.94,1,0,"1 nonsynonymous","S69A",1
"lib1","SARS-CoV-2","GGCATACAATACGCAG",1,11.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93S G174I F185C",3
"lib1","SARS-CoV-2","GGCATACCTGCGCGCA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","P7T L38I E141V T201*",4
"lib1","SARS-CoV-2","GGCATACTAGAGAAAT",1,30.96,10.69,-0.08,0.09,2.73,1.05,0,">1 nonsynonymous","N24T A105G G116N Y123F",4
"lib1","SARS-CoV-2","GGCATAGAAACCATGA",2,39.55,6,-4.76,1.92,1.5,1.13,0.02,">1 nonsynonymous","I80Q N92W P133C P149M Y165Q",5
"lib1","SARS-CoV-2","GGCATAGACGCCGTAC",6,69.84,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37L W106P",2
"lib1","SARS-CoV-2","GGCATATATACTTCAA",9,3.89,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","GGCATATGTTTGGAAA",4,14.07,8.01,-2.75,0.31,1.5,1.13,0.06,">1 nonsynonymous","S19R S41W G174W",3
"lib1","SARS-CoV-2","GGCATCACGCGATACG",3,49.84,10.11,-0.65,0.07,2.88,1,0,">1 nonsynonymous","K87S D98G K198W",3
"lib1","SARS-CoV-2","GGCATCCAACAATTCT",10,153.59,6,-4.76,0.72,1.5,1.19,0.01,">1 nonsynonymous","N1C A14H Y39A Y119A S129P",5
"lib1","SARS-CoV-2","GGCATCCAGACGACTT",4,48.83,8.6,-2.17,0.18,1.75,1.16,0.01,">1 nonsynonymous","F44S N92S",2
"lib1","SARS-CoV-2","GGCATCCTGACAATTT",1,60.64,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C31L Y50I S139N G152C",4
"lib1","SARS-CoV-2","GGCATCTCCTAGATTT",1,6.72,6.28,-4.48,2,1.69,1.19,0.02,">1 nonsynonymous","G86R E141S",2
"lib1","SARS-CoV-2","GGCATCTTATGTTCAC",7,81.84,10.16,-0.61,0.1,2.68,1.03,0,">1 nonsynonymous","D59M V153W Q163I",3
"lib1","SARS-CoV-2","GGCATGAAACTTGCCG",3,20.81,6.56,-4.21,0.48,1.5,1.13,0.06,">1 nonsynonymous","F12S N64S C158Y F167L",4
"lib1","SARS-CoV-2","GGCATGAAATGGGTTG",9,156.89,10.38,-0.38,0.04,2.84,1.05,0,">1 nonsynonymous","S41V E141R",2
"lib1","SARS-CoV-2","GGCATGAGACAGAGAA",4,45.2,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","Y35K T55L Y121C S129I V180L",5
"lib1","SARS-CoV-2","GGCATGAGAGGATATA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99N V153N Y165C H189S",4
"lib1","SARS-CoV-2","GGCATGAGATAATAAA",1,99.49,10.48,-0.29,0.04,2.92,1.01,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","GGCATGATCGTGGAGG",1,10.1,9.18,-1.58,0.24,1.74,1.08,0.03,">1 nonsynonymous","S69N T85W T148M",3
"lib1","SARS-CoV-2","GGCATGCAAAACCTGA",5,38.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94E T148I N171M",3
"lib1","SARS-CoV-2","GGCATGCTCCCCATGA",6,49.2,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","D34A G86V S164A",3
"lib1","SARS-CoV-2","GGCATGCTCCGCTCGC",2,26.14,7.54,-3.23,0.38,1.5,1.24,0.04,">1 nonsynonymous","V52E T63F S139E",3
"lib1","SARS-CoV-2","GGCATGCTCTTACTTG",3,36.33,9.35,-1.41,0.15,2.35,1.05,0.01,">1 nonsynonymous","L5N S129P E141W T193P",4
"lib1","SARS-CoV-2","GGCATGGAATGAAAAT",1,62.31,9.58,-1.18,0.06,2.89,1.08,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","GGCATGGATCAACTGA",2,22.31,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","N109W G152L C158P",3
"lib1","SARS-CoV-2","GGCATGGCTAGCTCAA",8,67.53,6,-4.76,1.62,1.5,1.14,0.02,">1 nonsynonymous","Y66S V77M T100Y P149K P161H C195I",6
"lib1","SARS-CoV-2","GGCATGTAATATTGCT",5,98.32,9.91,-0.86,0.08,2.1,1.04,0,">1 nonsynonymous","V11E T148S",2
"lib1","SARS-CoV-2","GGCATGTAGAAAGACG",3,1,NA,NA,NA,NA,NA,NA,"stop","L95Y N118*",2
"lib1","SARS-CoV-2","GGCATGTATACCGTTG",4,32.95,10.08,-0.69,0.06,2.76,1.09,0,">1 nonsynonymous","E10F F62I",2
"lib1","SARS-CoV-2","GGCATGTATGTAATAT",1,31.97,9.78,-0.99,0.1,2.46,1.03,0.01,">1 nonsynonymous","A14L S43V N64A E141M",4
"lib1","SARS-CoV-2","GGCATTACTTCTTAAC",7,86.79,9.37,-1.4,0.06,2.87,1.1,0,">1 nonsynonymous","D90S Y119S",2
"lib1","SARS-CoV-2","GGCATTACTTTGGGAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","R25S A33L L38I R124*",4
"lib1","SARS-CoV-2","GGCATTAGCCAACCCC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H C49H N64M G83F F99L G117L N130T A145I S200L",9
"lib1","SARS-CoV-2","GGCATTATGATACAAA",3,28.1,7.28,-3.48,0.23,1.5,1.11,0.02,">1 nonsynonymous","T3L V11D P149M V180I",4
"lib1","SARS-CoV-2","GGCATTCATAGATAAT",2,65.74,9.64,-1.13,0.13,2.37,1.05,0.01,">1 nonsynonymous","S41L N107K",2
"lib1","SARS-CoV-2","GGCATTCATGTCTGAC",2,42.85,10.39,-0.38,0.08,2.8,1,0,">1 nonsynonymous","P7D P96Q T100Y K199S",4
"lib1","SARS-CoV-2","GGCATTCCCGGTCAGA",1,6.49,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I2H Y119L T148N P177W",4
"lib1","SARS-CoV-2","GGCATTCGAATTTGTT",2,39.94,10.5,-0.26,0.04,2.95,1,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","GGCATTCTAGGCATAG",5,25.83,6,-4.76,2,1.5,1.39,0.04,">1 nonsynonymous","S53L P96S V153R Q176M V182S",5
"lib1","SARS-CoV-2","GGCATTGACACCCCAC",4,161.74,9.25,-1.52,0.07,2.85,1.1,0,">1 nonsynonymous","Y39K F156D",2
"lib1","SARS-CoV-2","GGCATTGACACTAAAA",10,17.27,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15E K56A T85V C102G T148P G152T Y165D",7
"lib1","SARS-CoV-2","GGCATTTAACTATTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R27S R73* V182G",3
"lib1","SARS-CoV-2","GGCATTTAAGCTACAT",5,79.17,6,-4.76,2,2.04,1.19,0.01,">1 nonsynonymous","I2E G117L C150V Y159I",4
"lib1","SARS-CoV-2","GGCATTTATGGAAACG",2,22.55,8.09,-2.67,0.31,1.5,1.2,0.03,">1 nonsynonymous","N1E L38T G174F",3
"lib1","SARS-CoV-2","GGCATTTCATTCACAT",3,86.08,6.16,-4.6,0.68,1.5,1.17,0.02,">1 nonsynonymous","S43K K87R D112F F160E",4
"lib1","SARS-CoV-2","GGCATTTCTAAACAGA",2,23.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F12K Y35Q T55G K94F",4
"lib1","SARS-CoV-2","GGCATTTGTTGATAAT",3,41.96,9.71,-1.06,0.11,2.79,1.1,0,"1 nonsynonymous","G117A",1
"lib1","SARS-CoV-2","GGCATTTTAGTGTGAG",9,35.44,6,-4.76,1.6,1.5,1.21,0.03,">1 nonsynonymous","S113W P133L V182M",3
"lib1","SARS-CoV-2","GGCCAAAAAGTTTGTT",3,75.02,9.5,-1.26,0.15,1.81,1.18,0.01,">1 nonsynonymous","Y91T D97H",2
"lib1","SARS-CoV-2","GGCCAAAATATAGTGG",3,20.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35R K87I D98G D112Q",4
"lib1","SARS-CoV-2","GGCCAAACAACACCGC",6,10.87,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","W23M N30F V77M D90V",4
"lib1","SARS-CoV-2","GGCCAAACAACTCTCC",3,49.83,10.45,-0.32,0.06,2.8,1.11,0,">1 nonsynonymous","D59L V173F",2
"lib1","SARS-CoV-2","GGCCAAACGAACTTAT",7,83.83,10.64,-0.13,0.07,2.91,1.05,0,"1 nonsynonymous","K114Y",1
"lib1","SARS-CoV-2","GGCCAAAGATCAAACC",2,2.12,NA,NA,NA,NA,NA,NA,"stop","R73* A81V D97M G152R",4
"lib1","SARS-CoV-2","GGCCAAAGATTTTAAA",5,86.12,10.78,0.02,0.06,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCCAACAAGTTGAAA",3,17.6,10.26,-0.5,0.07,2.91,1.05,0,">1 nonsynonymous","C6H R16E",2
"lib1","SARS-CoV-2","GGCCAACAGCATTCAT",5,43.01,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A22R S69E Y93I Y143L",4
"lib1","SARS-CoV-2","GGCCAACCAACCATAG",6,31.02,9.84,-0.92,0.08,1.96,1.1,0,">1 nonsynonymous","T55G F70Y K198R",3
"lib1","SARS-CoV-2","GGCCAACCTCTAAAGA",9,106.57,10.24,-0.52,0.05,2.82,1,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","GGCCAACGGATCCACT",3,27.08,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","S19W C61M G86R N118D G152H",5
"lib1","SARS-CoV-2","GGCCAAGAATAAGCGA",1,17.58,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A33H I72P Y91N D97W P197T",5
"lib1","SARS-CoV-2","GGCCAAGACTATAGGA",2,36.68,10.24,-0.53,0.08,2.67,1.08,0,">1 nonsynonymous","N130V S147N V180L",3
"lib1","SARS-CoV-2","GGCCAAGACTTAGGCT",8,57.85,8.44,-2.32,0.1,2.97,1.01,0,">1 nonsynonymous","C61H N157L S200G",3
"lib1","SARS-CoV-2","GGCCAAGCTCCATAAA",3,17.19,10.09,-0.68,0.11,2.89,1.07,0,">1 nonsynonymous","R136Q F156L",2
"lib1","SARS-CoV-2","GGCCAAGCTGGCTAAG",9,2.64,NA,NA,NA,NA,NA,NA,"stop","V37L K87*",2
"lib1","SARS-CoV-2","GGCCAAGGAATACAAA",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F C150F T201P",3
"lib1","SARS-CoV-2","GGCCAAGGACCGAATC",9,7685.92,8.5,-2.26,0.1,2.93,1.01,0,"1 nonsynonymous","N157R",1
"lib1","SARS-CoV-2","GGCCAAGGCGACAAAC",1,20.37,6,-4.76,1.61,3,1.09,0,">1 nonsynonymous","C61N A89W R124F E154T",4
"lib1","SARS-CoV-2","GGCCAAGTATGATTAC",2,16.69,6,-4.76,2,3,1.05,0,">1 nonsynonymous","G83F T85L N118T P149W A190I",5
"lib1","SARS-CoV-2","GGCCAAGTGCACCAAT",6,249.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10M V37Q K56V R73L F134S Y143L",6
"lib1","SARS-CoV-2","GGCCAAGTTCCGTTCC",7,119.16,10.67,-0.1,0.04,2.94,1.03,0,">1 nonsynonymous","T55N K114S",2
"lib1","SARS-CoV-2","GGCCAATAAAAACGAT",2,38.61,10.61,-0.15,0.24,2.51,1.03,0.04,">1 nonsynonymous","D90F Q168F",2
"lib1","SARS-CoV-2","GGCCAATGATTTTGCT",6,173,9.73,-1.03,0.11,2.28,1.06,0,">1 nonsynonymous","Q144L Y178S P197L",3
"lib1","SARS-CoV-2","GGCCAATGGTGGTACC",1,40.32,9.9,-0.86,0.11,2.29,1.09,0,"1 nonsynonymous","F12Y",1
"lib1","SARS-CoV-2","GGCCACAACGAACAGC",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T G116M L122Y Y175T",4
"lib1","SARS-CoV-2","GGCCACAAGAAAGTTA",3,61.3,7.04,-3.73,0.19,1.5,1.15,0.01,">1 nonsynonymous","T55S F62S C158A P197S",4
"lib1","SARS-CoV-2","GGCCACACACACAAAT",6,37.26,9.96,-0.8,0.13,2.13,1.1,0.01,">1 nonsynonymous","N1H G9A L38S P197A",4
"lib1","SARS-CoV-2","GGCCACACGTTAAAAG",2,25.57,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V52N A67G L125A",3
"lib1","SARS-CoV-2","GGCCACCATTTCTGTC",3,81.7,10.03,-0.74,0.06,2.7,1.02,0,">1 nonsynonymous","I104M F185V",2
"lib1","SARS-CoV-2","GGCCACCCATCACCGA",5,61.88,8.03,-2.74,0.14,2.52,1.13,0.01,"1 nonsynonymous","G146P",1
"lib1","SARS-CoV-2","GGCCACCCCTCGAACA",12,92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","K87L Y119P D137L L187M",4
"lib1","SARS-CoV-2","GGCCACCCGTTAAGGG",4,55.75,9.61,-1.15,0.11,2.59,1.1,0.01,"1 nonsynonymous","S108Q",1
"lib1","SARS-CoV-2","GGCCACCGACAGATGC",1,42.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R Y50I D68L",3
"lib1","SARS-CoV-2","GGCCACCGTCATACAA",2,23.88,7.07,-3.69,0.23,1.5,1.12,0.01,">1 nonsynonymous","N1S S43Q F126D N151K",4
"lib1","SARS-CoV-2","GGCCACGAAAAGGTAC",2,17.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50H G74A F99W A105H L125N F160L",6
"lib1","SARS-CoV-2","GGCCACGGTAACTCGT",9,76.43,7.57,-3.19,0.21,1.5,1.11,0.01,">1 nonsynonymous","W106S G117V",2
"lib1","SARS-CoV-2","GGCCACTCTAGATTGT",3,48.33,10.66,-0.11,0.03,2.88,1.04,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","GGCCACTCTTCTATCT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* R127L P169S",3
"lib1","SARS-CoV-2","GGCCAGAACCATATTG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N13I A105T T201*",3
"lib1","SARS-CoV-2","GGCCAGAATGATTCAT",6,81.59,10.65,-0.11,0.04,2.94,1,0,">1 nonsynonymous","A145S T148I S164A",3
"lib1","SARS-CoV-2","GGCCAGAATGTCCGTA",3,8.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49V P54Q C61K E135N",4
"lib1","SARS-CoV-2","GGCCAGCAGGAATCAT",1,5.52,10.05,-0.71,0.26,2.58,1.04,0.02,">1 nonsynonymous","P7A D59T Q84V Y91L G196A",5
"lib1","SARS-CoV-2","GGCCAGCTTAAATAAA",11,174.62,9.81,-0.95,0.11,1.9,1.09,0.01,">1 nonsynonymous","P82V K132T P191G",3
"lib1","SARS-CoV-2","GGCCAGCTTAATCCTG",12,222.5,10.7,-0.06,0.06,2.87,1.06,0,">1 nonsynonymous","S43V D90A N120Q",3
"lib1","SARS-CoV-2","GGCCAGGAAATAGGAC",4,248.32,9.86,-0.9,0.04,2.89,1.03,0,">1 nonsynonymous","L5E N109Y",2
"lib1","SARS-CoV-2","GGCCAGGACAACATCA",5,103.19,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G86L N118V F134N S147L",4
"lib1","SARS-CoV-2","GGCCAGGAGTTACTAC",1,47.12,10.53,-0.23,0.05,2.9,1.08,0,">1 nonsynonymous","T140L T148Y",2
"lib1","SARS-CoV-2","GGCCAGGATTGCCGAA",3,96.65,8.64,-2.13,0.1,2.82,1.06,0,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","GGCCAGGTCATTATGT",2,45.75,10.24,-0.52,0.06,2.85,1.05,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","GGCCAGTCAGGAGTAC",4,38.66,6,-4.76,2,3,1.16,0,">1 nonsynonymous","G9L A33E V77K D90C F99E",5
"lib1","SARS-CoV-2","GGCCAGTCATGACATA",4,4.24,NA,NA,NA,NA,NA,NA,"stop","R25Y P82* R127V T140N",4
"lib1","SARS-CoV-2","GGCCAGTCCCTCTCAA",5,80.23,8.55,-2.22,0.13,2.03,1.13,0.01,">1 nonsynonymous","V37Y T55H F167L",3
"lib1","SARS-CoV-2","GGCCATAAACGGTAGC",2,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R A89I F156A",3
"lib1","SARS-CoV-2","GGCCATACACATTACA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","G9* G74V P96A A145S F160H G174W S200V",7
"lib1","SARS-CoV-2","GGCCATACACCATTAA",3,83.25,9.16,-1.61,0.09,2.82,1.14,0,">1 nonsynonymous","Y119G N130Y T148A",3
"lib1","SARS-CoV-2","GGCCATCACGATCCGT",7,69.24,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F8I G101N",2
"lib1","SARS-CoV-2","GGCCATCATCTCTATT",4,18.56,6,-4.76,0.84,3,1.08,0,">1 nonsynonymous","K56S K87N N107T E154I F167R",5
"lib1","SARS-CoV-2","GGCCATCATGAGGCAT",3,25.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K26R A105S G146V G155R T170A",5
"lib1","SARS-CoV-2","GGCCATCCCCATAGAC",2,9.09,9.96,-0.81,0.12,2.7,1.03,0,">1 nonsynonymous","L5P E10L D90L P149Q",4
"lib1","SARS-CoV-2","GGCCATCCTATAACAC",1,4.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","GGCCATCGCGACGCCT",1,67.42,9.67,-1.09,0.09,2.07,1.07,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","GGCCATCTCAATTGCG",1,15.33,8.92,-1.85,0.08,2.93,1.05,0,">1 nonsynonymous","C61K K87H Y119W",3
"lib1","SARS-CoV-2","GGCCATGAAGTAGCGG",2,26.36,6,-4.76,2,1.5,1.11,0.02,"1 nonsynonymous","V71P",1
"lib1","SARS-CoV-2","GGCCATGACCCGTTGT",6,91.17,10.73,-0.04,0.07,2.89,1.07,0,"1 nonsynonymous","A190R",1
"lib1","SARS-CoV-2","GGCCATGATGGGTCTA",1,16.83,10.21,-0.55,0.11,2.73,1,0.01,">1 nonsynonymous","N24F Y175F",2
"lib1","SARS-CoV-2","GGCCATGCACAATTAA",2,17.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2V N120E Y143V V181H",4
"lib1","SARS-CoV-2","GGCCATGCCAGATATA",1,42.68,9.49,-1.27,0.23,1.8,1.13,0.02,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","GGCCCAAAAAAATTCT",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib1","SARS-CoV-2","GGCCCAAATTTTCTTA",8,0.67,NA,NA,NA,NA,NA,NA,"stop","D90G T100* Y119A N151S",4
"lib1","SARS-CoV-2","GGCCCAACACTAAAGG",5,84.54,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F44C F62I D68L Y119A V153G H189S",6
"lib1","SARS-CoV-2","GGCCCAACTACGAGAA",3,21.16,10.08,-0.69,0.22,1.77,1.06,0.01,">1 nonsynonymous","S41T K94V",2
"lib1","SARS-CoV-2","GGCCCAAGGGCTATAA",12,138.33,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D137R G146L",2
"lib1","SARS-CoV-2","GGCCCAATGAGAGTTG",3,63.41,9.92,-0.84,0.08,2.44,1.05,0,">1 nonsynonymous","F12V C61W",2
"lib1","SARS-CoV-2","GGCCCACAAATGATGT",2,67.06,10.41,-0.36,0.05,2.87,1,0,">1 nonsynonymous","A33T N120V",2
"lib1","SARS-CoV-2","GGCCCACAAGGTGAAT",2,41.47,10.08,-0.68,0.07,2.67,1,0,">1 nonsynonymous","V32S I104T S129G",3
"lib1","SARS-CoV-2","GGCCCACCTGTTTCAC",2,34.36,9.38,-1.39,0.14,1.82,1.16,0.01,">1 nonsynonymous","E10K A105I E141D",3
"lib1","SARS-CoV-2","GGCCCACTGTCAGATA",7,116.21,9.21,-1.56,0.06,2.89,1.07,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","GGCCCAGAATAAAATG",6,67.53,8.85,-1.91,0.1,2.24,1.08,0,">1 nonsynonymous","P7K C61L N118I",3
"lib1","SARS-CoV-2","GGCCCAGCACAAGGAC",6,8.49,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17R L60Y D90G Y143T P161Y",5
"lib1","SARS-CoV-2","GGCCCAGTAATAGGGG",5,51.02,10.74,-0.02,0.07,2.88,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GGCCCAGTGCAGGCGG",2,16.34,9.82,-0.94,0.11,2.7,1.15,0.01,">1 nonsynonymous","N64T Q84I S147V E154L",4
"lib1","SARS-CoV-2","GGCCCATAAGAACGAA",3,28.84,9.94,-0.82,0.07,2.68,1.15,0,">1 nonsynonymous","E10T V32K L125S",3
"lib1","SARS-CoV-2","GGCCCATAGCGATAAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","A14N S36* C61I",3
"lib1","SARS-CoV-2","GGCCCATCCCGAGACG",6,52.48,8.39,-2.37,0.27,1.5,1.11,0.03,">1 nonsynonymous","I142R T170L",2
"lib1","SARS-CoV-2","GGCCCATTCTTACCGA",2,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I V115Y E141P V182S",4
"lib1","SARS-CoV-2","GGCCCCAACACCTAGA",4,0.34,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","GGCCCCAAGGCGTAAC",7,160.49,10.77,0.01,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCCCCCAAGATAGAT",2,0.48,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib1","SARS-CoV-2","GGCCCCCCAGTATGAA",3,114.77,10.27,-0.49,0.04,2.97,1,0,">1 nonsynonymous","P149S P169V",2
"lib1","SARS-CoV-2","GGCCCCGAGTCAAGCT",3,26.89,6.41,-4.36,0.58,1.5,1.07,0.03,">1 nonsynonymous","K87L W106A D137M",3
"lib1","SARS-CoV-2","GGCCCCGCACTGTTGG",4,10.26,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T3I Y50C A81M V103A G174D A192G",6
"lib1","SARS-CoV-2","GGCCCCGTTAAACACG",4,8.95,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L5R F12L T85L P161I G196I",5
"lib1","SARS-CoV-2","GGCCCCTAGACTCCAT",2,10.82,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y35R G101S",2
"lib1","SARS-CoV-2","GGCCCGCAACCTAGAA",11,215.03,10.74,-0.02,0.05,2.9,1.05,0,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","GGCCCGCATCGTCTTG",2,23.65,9.96,-0.8,0.09,2.89,1,0,">1 nonsynonymous","L57G G83N",2
"lib1","SARS-CoV-2","GGCCCGGTTGAAATAT",4,44.71,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","F99N N110G R127S Y178R",4
"lib1","SARS-CoV-2","GGCCCGGTTTCTTTCT",6,26.31,10.66,-0.1,0.06,2.96,1.02,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","GGCCCTACCTTTAACA",1,25.32,10.75,-0.02,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCCCTACTAATTGGA",2,16.25,10.24,-0.52,0.11,2.73,1.11,0,">1 nonsynonymous","V37A D59V Y66M",3
"lib1","SARS-CoV-2","GGCCCTCCAATAAGGG",7,41.33,9.98,-0.78,0.22,1.82,1.06,0.02,">1 nonsynonymous","R16G A105I",2
"lib1","SARS-CoV-2","GGCCCTCGAACTGGAA",4,100.93,10.64,-0.13,0.05,2.95,1.01,0,">1 nonsynonymous","N1V T148F",2
"lib1","SARS-CoV-2","GGCCCTGATAGAACAC",8,52.7,6,-4.76,2,3,1.17,0,">1 nonsynonymous","E10S L111M F126T F167R",4
"lib1","SARS-CoV-2","GGCCCTGTCTACCAAT",3,92,10.05,-0.71,0.07,2.66,1,0,">1 nonsynonymous","C61L A89V",2
"lib1","SARS-CoV-2","GGCCCTGTTTGAAAAT",1,6.6,9.14,-1.63,0.28,1.67,1.17,0.03,">1 nonsynonymous","T15V V37H P96H V153K",4
"lib1","SARS-CoV-2","GGCCCTTAAGTCGACA",1,16.23,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","L38H V65I A89M L125T Y178A",5
"lib1","SARS-CoV-2","GGCCCTTGATGGGAAT",4,65.89,10.18,-0.59,0.06,2.88,1,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","GGCCGAAAAACAGAGT",1,51.34,10.2,-0.56,0.04,2.93,1,0,">1 nonsynonymous","K87R S139N F160T Q168R",4
"lib1","SARS-CoV-2","GGCCGAACATAACCAC",1,73.42,10.77,0.01,0.06,2.92,1,0,"1 nonsynonymous","S200W",1
"lib1","SARS-CoV-2","GGCCGAACTTCATAAA",5,142.71,10.21,-0.56,0.05,2.95,1,0,">1 nonsynonymous","L57A K87I A190S S200I",4
"lib1","SARS-CoV-2","GGCCGAAGATACACTA",3,140.02,6,-4.76,1.23,1.5,1.23,0.02,">1 nonsynonymous","L5V Y178G",2
"lib1","SARS-CoV-2","GGCCGAATAAGTTCAG",9,79.48,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F12T S19G C61F P149T F156R Q168R",6
"lib1","SARS-CoV-2","GGCCGAATTAATTATC",4,22.73,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6L K87E A105E",3
"lib1","SARS-CoV-2","GGCCGAATTATTCGGC",7,74.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64P A89P Y119P V181T",4
"lib1","SARS-CoV-2","GGCCGACAAATATAGG",1,42.49,8,-2.76,0.22,1.5,1.05,0.01,">1 nonsynonymous","F17K N120W",2
"lib1","SARS-CoV-2","GGCCGACCTCATAGTA",9,91.63,9.32,-1.44,0.08,1.9,1.09,0,">1 nonsynonymous","F12S Y39N K56S T63K",4
"lib1","SARS-CoV-2","GGCCGACCTCTAGATT",2,5.36,10.68,-0.09,0.06,3,1,0,">1 nonsynonymous","Y66C G196V",2
"lib1","SARS-CoV-2","GGCCGACTGGTGAAAA",6,2.25,NA,NA,NA,NA,NA,NA,"stop","C61G D90L W106* F134N",4
"lib1","SARS-CoV-2","GGCCGAGAAATCAAGT",4,68.17,10.69,-0.07,0.05,2.87,1.09,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","GGCCGAGAGATTACGT",2,22.76,10.61,-0.15,0.11,2.99,1,0.01,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","GGCCGAGCTTCAATTA",6,49.59,10.67,-0.1,0.05,2.91,1,0,"1 nonsynonymous","G152T",1
"lib1","SARS-CoV-2","GGCCGAGTAAATGTAG",6,20.04,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A67S V103P F156V",3
"lib1","SARS-CoV-2","GGCCGATAGAAAAGAT",2,53.16,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F62Y D68L T100S T201M",4
"lib1","SARS-CoV-2","GGCCGATGATCTGCTC",5,36.83,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","W23G Y39M R127H",3
"lib1","SARS-CoV-2","GGCCGATTAACTAAGG",1,13.79,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V11S I88Y G116L D137Q A190V",5
"lib1","SARS-CoV-2","GGCCGCTAGCGGAAAA",2,92.29,9,-1.77,0.08,2.55,1.1,0,">1 nonsynonymous","E10S G116L G174T",3
"lib1","SARS-CoV-2","GGCCGCTTCTCGATTG",6,0.68,NA,NA,NA,NA,NA,NA,"stop","F44I E76W F126M S147T Y178*",5
"lib1","SARS-CoV-2","GGCCGGACACGGGTAA",3,30.66,9.14,-1.63,0.14,1.82,1.15,0.01,"1 nonsynonymous","V77E",1
"lib1","SARS-CoV-2","GGCCGGAGTAGTCGGA",5,1.67,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","GGCCGGCCATTTCAGG",3,57.81,8.61,-2.16,0.25,1.5,1.06,0.02,">1 nonsynonymous","C6Y K48W K56A Q163K",4
"lib1","SARS-CoV-2","GGCCGGTACAGAGAAA",3,2.64,NA,NA,NA,NA,NA,NA,"stop","C102W G146L N171*",3
"lib1","SARS-CoV-2","GGCCGTACATCATATA",1,53.91,10.68,-0.08,0.05,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCCGTACTTATTGGT",7,137.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S129C Y165N Y175R",3
"lib1","SARS-CoV-2","GGCCGTACTTTATTAA",3,9.21,10.54,-0.23,0.09,2.88,1,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","GGCCGTAGAATAGAGG",6,19.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5T G152Y T170V S184R",4
"lib1","SARS-CoV-2","GGCCGTATTATTTAGA",2,18.11,6.1,-4.66,2,1.5,1.15,0.06,">1 nonsynonymous","T3P C150Y",2
"lib1","SARS-CoV-2","GGCCGTGACTTTATTA",3,5.89,6,-4.76,2,2.74,1.15,0.02,">1 nonsynonymous","Y50C K56S D90T K114G S147G C158Q A190R",7
"lib1","SARS-CoV-2","GGCCGTGGTCTCGTTA",2,18.93,9.29,-1.47,0.2,1.5,1.03,0.02,">1 nonsynonymous","V11G S19T",2
"lib1","SARS-CoV-2","GGCCTAAATGCGTTTT",5,112.4,10.81,0.05,0.06,2.89,1.06,0,"1 nonsynonymous","I2E",1
"lib1","SARS-CoV-2","GGCCTAAATGTCGCTT",3,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S164I S200C",2
"lib1","SARS-CoV-2","GGCCTAACCCTAGCCG",6,2.85,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","GGCCTAAGCTACGCTT",7,140.41,8.48,-2.29,0.11,2.1,1.12,0.01,">1 nonsynonymous","D97R S113R",2
"lib1","SARS-CoV-2","GGCCTAAGTAAACAAA",2,21.84,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","G9C Y21R",2
"lib1","SARS-CoV-2","GGCCTAATACTAAATT",2,7.65,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A14P G86T",2
"lib1","SARS-CoV-2","GGCCTAATACTAATGT",3,26.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N13S I28R I72R H189C",4
"lib1","SARS-CoV-2","GGCCTAATATAAAGCA",5,35.96,6.43,-4.33,0.5,1.5,1.18,0.02,">1 nonsynonymous","F12L L57F N64L E76G",4
"lib1","SARS-CoV-2","GGCCTAATGTAAACAT",2,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I G152D R179F P197L",4
"lib1","SARS-CoV-2","GGCCTAATGTATCGTA",6,60.18,6.08,-4.69,0.61,1.73,1.1,0.01,">1 nonsynonymous","F44W G117R P133L",3
"lib1","SARS-CoV-2","GGCCTAATTGACATGC",1,34.49,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4M P54L T85L Y91D K128H I138M",6
"lib1","SARS-CoV-2","GGCCTAGAGTTCTGAA",2,15.13,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L60H Y66S G152C N157H T201K",5
"lib1","SARS-CoV-2","GGCCTAGCGAACGACA",1,30,10.21,-0.55,0.1,2.53,1.02,0,">1 nonsynonymous","I2H D90L T100A",3
"lib1","SARS-CoV-2","GGCCTAGTCATCGCCT",11,129.45,10.62,-0.14,0.05,2.92,1.02,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","GGCCTATAATATTTCT",2,47.98,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","T46W C49R",2
"lib1","SARS-CoV-2","GGCCTATCGCCCGACG",2,13.31,6,-4.76,2,1.5,1.07,0.06,">1 nonsynonymous","C61Q N92M F126M K198L",4
"lib1","SARS-CoV-2","GGCCTCAAACCAAAAG",4,22.05,10.5,-0.26,0.07,2.84,1.05,0,">1 nonsynonymous","I28W S41H R136S A192Y",4
"lib1","SARS-CoV-2","GGCCTCAAATTCATGC",1,7.87,9.83,-0.93,0.31,1.81,1.01,0.05,">1 nonsynonymous","N13L V153C T170M",3
"lib1","SARS-CoV-2","GGCCTCCCAAAGGTCA",6,276.4,10.73,-0.03,0.07,2.88,1.08,0,">1 nonsynonymous","D97E L188K",2
"lib1","SARS-CoV-2","GGCCTCCCTTACGACT",3,14.06,6.65,-4.11,0.39,1.5,1.11,0.03,">1 nonsynonymous","Y93I N107L",2
"lib1","SARS-CoV-2","GGCCTCGGCTTGAGTA",2,7.68,10.08,-0.68,0.19,2,1.03,0.02,">1 nonsynonymous","V11S E154K",2
"lib1","SARS-CoV-2","GGCCTCTAAAAATAAT",3,43.64,10.56,-0.2,0.04,2.92,1.03,0,">1 nonsynonymous","A42K D98L",2
"lib1","SARS-CoV-2","GGCCTGACCCGAAAAC",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65E T85C E141G A192K T201L",5
"lib1","SARS-CoV-2","GGCCTGCATTGCCCCT",2,5.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23Y N151S T170P",3
"lib1","SARS-CoV-2","GGCCTGGAACCCATGG",2,25.33,6,-4.76,0.77,2.98,1.07,0,">1 nonsynonymous","F126M C150F N157R Y175D",4
"lib1","SARS-CoV-2","GGCCTGGAGCTATTCA",2,41.73,10.73,-0.03,0.07,2.88,1.08,0,">1 nonsynonymous","T46Q Y178F",2
"lib1","SARS-CoV-2","GGCCTTAATGCGGGCC",10,126.16,10.06,-0.7,0.09,2.43,1.08,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","GGCCTTACAACTACGC",20,97.92,6.6,-4.16,0.46,1.5,1.3,0.02,">1 nonsynonymous","A89R D97N N118A N151C",4
"lib1","SARS-CoV-2","GGCCTTCAAGAACGTG",10,182.61,10.54,-0.23,0.05,2.88,1.03,0,"1 nonsynonymous","D98I",1
"lib1","SARS-CoV-2","GGCCTTCAAGCTACCA",1,19.1,6,-4.76,1.54,1.5,1.19,0.02,">1 nonsynonymous","L122M F167C V173F S184E",4
"lib1","SARS-CoV-2","GGCCTTCATTCAATCC",4,2.45,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","GGCCTTCCAGCCGCTG",5,23.34,10.09,-0.68,0.08,2.85,1.07,0,">1 nonsynonymous","T3P S45D Q163E",3
"lib1","SARS-CoV-2","GGCCTTCGGGGCAACA",1,34.94,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4L F17L L38P D97Q T201A",5
"lib1","SARS-CoV-2","GGCCTTGCCAGATCAA",8,0.15,NA,NA,NA,NA,NA,NA,"stop","C6I R27L S41R S53P Q84* N107I",6
"lib1","SARS-CoV-2","GGCCTTTCAAGCAATA",1,18.38,6.79,-3.98,0.48,1.5,1.28,0.04,">1 nonsynonymous","S53L G86L G174C",3
"lib1","SARS-CoV-2","GGCCTTTCTCCCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* E76R P177T",3
"lib1","SARS-CoV-2","GGCCTTTGCATAGCGA",3,7.91,10.64,-0.13,0.08,2.78,1.01,0,"1 nonsynonymous","P169H",1
"lib1","SARS-CoV-2","GGCCTTTGTTATACTG",1,19.02,10.2,-0.56,0.06,2.82,1,0,">1 nonsynonymous","N1R R136V",2
"lib1","SARS-CoV-2","GGCGAAAATTTCTTGT",5,1.77,NA,NA,NA,NA,NA,NA,"stop","N24P Y93F P149*",3
"lib1","SARS-CoV-2","GGCGAAACTTGACCGA",1,28.96,10.73,-0.04,0.04,2.92,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCGAAATTAACATGA",2,18.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S113D V180G",2
"lib1","SARS-CoV-2","GGCGAACACATTTCAA",2,21.95,10.78,0.02,0.1,3,1.01,0.01,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","GGCGAACATGAACGCT",3,49.98,6,-4.76,1.07,1.5,1.08,0.02,">1 nonsynonymous","F8Y N40M R124A",3
"lib1","SARS-CoV-2","GGCGAACCAATCATCT",13,228.03,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6A K48Q Y175I L188S",4
"lib1","SARS-CoV-2","GGCGAACCGAAGTTCG",3,58.54,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K94Q G101L",2
"lib1","SARS-CoV-2","GGCGAAGCAAAGATAC",5,58.61,9.44,-1.32,0.24,1.5,1.1,0.02,">1 nonsynonymous","V103C N171V Y175F K198H",4
"lib1","SARS-CoV-2","GGCGAAGCTGATATTA",5,55.92,6.67,-4.09,0.65,1.5,1.23,0.06,">1 nonsynonymous","V37I G51V R73P T85M T201E",5
"lib1","SARS-CoV-2","GGCGAAGTCAGGTTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","T55G D75* P96H E135P V173R",5
"lib1","SARS-CoV-2","GGCGAATAAAAAAAAG",2,13.04,6,-4.76,1.12,1.5,1.09,0,">1 nonsynonymous","N92S S113D",2
"lib1","SARS-CoV-2","GGCGAATAACAGATTA",3,8.33,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N130G S139R Y165S",3
"lib1","SARS-CoV-2","GGCGAATACTAACTAA",2,23.21,6,-4.76,2,1.51,1.21,0.02,">1 nonsynonymous","S19E L131E F160P",3
"lib1","SARS-CoV-2","GGCGAATCTCATAACG",5,60.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7L I80W F99P N107Y",4
"lib1","SARS-CoV-2","GGCGAATGGGGAACGC",1,11.29,10.76,0,0.14,3,1,0,">1 nonsynonymous","Y50F K56S",2
"lib1","SARS-CoV-2","GGCGAATTGCCACGTA",8,0.7,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GGCGACAGTCCATATA",3,69.63,8.63,-2.14,0.08,2.82,1.09,0,"1 nonsynonymous","Y143A",1
"lib1","SARS-CoV-2","GGCGACGCAACACCGC",2,71.79,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y91G N157R",2
"lib1","SARS-CoV-2","GGCGAGCCAATATATA",6,48.54,10.23,-0.53,0.07,2.7,1,0,">1 nonsynonymous","F12L A18T S129K",3
"lib1","SARS-CoV-2","GGCGAGGGCGGTATTA",1,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N K114N A145S",3
"lib1","SARS-CoV-2","GGCGAGGTCCTACCAC",1,52.94,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D59H N64T Y91V S113N K198L",5
"lib1","SARS-CoV-2","GGCGAGGTTATACAAA",4,83.56,9.69,-1.07,0.15,1.88,1.07,0.01,">1 nonsynonymous","G51H R136F",2
"lib1","SARS-CoV-2","GGCGAGTAAAGAGCTA",1,46.94,10.4,-0.36,0.06,2.87,1.06,0,">1 nonsynonymous","S41C F160C",2
"lib1","SARS-CoV-2","GGCGAGTAAATGTTCA",3,27.85,10.19,-0.57,0.07,2.87,1,0,">1 nonsynonymous","D90S G152L",2
"lib1","SARS-CoV-2","GGCGAGTTTAGTACCA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","F47* K87Q A145S",3
"lib1","SARS-CoV-2","GGCGATAACTTTTATA",3,101.48,8.16,-2.6,0.1,2.39,1.1,0,">1 nonsynonymous","T55G G74K Y119E N151Q",4
"lib1","SARS-CoV-2","GGCGATAATATCTTTA",1,36.87,10.82,0.06,0.04,2.96,1.02,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","GGCGATAATCTTACAG",1,0.43,NA,NA,NA,NA,NA,NA,"stop","V103S N107H E141*",3
"lib1","SARS-CoV-2","GGCGATACAATGATTT",2,69.31,10.16,-0.6,0.08,2.45,1,0,"1 nonsynonymous","P96E",1
"lib1","SARS-CoV-2","GGCGATACACCTCTCC",3,94.96,10.74,-0.02,0.07,2.95,1.01,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","GGCGATATTGTAAAGT",3,41.25,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P7E F156L Y175G",3
"lib1","SARS-CoV-2","GGCGATGGGCATTCTG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","I2S K56* Y91T W106R P133W",5
"lib1","SARS-CoV-2","GGCGATGTACAAAATT",6,33.54,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Y50A I72K G117P F167V",4
"lib1","SARS-CoV-2","GGCGATTTACCCTTTA",8,26.02,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","K26A I88S",2
"lib1","SARS-CoV-2","GGCGCAAAAAAACCCA",1,13.03,10.45,-0.32,0.09,2.96,1.03,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","GGCGCAAAATCCGGAT",5,1.01,NA,NA,NA,NA,NA,NA,"stop","N13P C61F E135*",3
"lib1","SARS-CoV-2","GGCGCAAAATGCATAC",1,10.16,10.76,0,0.08,2.99,1.04,0,">1 nonsynonymous","N1H C61H C195K",3
"lib1","SARS-CoV-2","GGCGCAAATCGAAGGC",1,51.03,10.38,-0.38,0.06,2.73,1,0,">1 nonsynonymous","G51E I138L",2
"lib1","SARS-CoV-2","GGCGCAAGAATTCATA",12,84.77,9.96,-0.81,0.06,2.79,1.05,0,">1 nonsynonymous","N64L Q168G",2
"lib1","SARS-CoV-2","GGCGCACATATAATTT",6,41.15,10.82,0.06,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCGCACATATCCGCT",8,16.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13K V65E G83M D97F T140F G174E",6
"lib1","SARS-CoV-2","GGCGCAGCAACGAATC",8,3318.61,8.19,-2.58,0.17,1.79,1.07,0.01,">1 nonsynonymous","A81D Y119F F156L",3
"lib1","SARS-CoV-2","GGCGCAGTCCGAATCA",11,621.24,9.73,-1.03,0.03,2.83,1.06,0,">1 nonsynonymous","Y35L P177S",2
"lib1","SARS-CoV-2","GGCGCATAACACTTTA",6,28.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R C61M V77W D90R F99L",5
"lib1","SARS-CoV-2","GGCGCATCACTTACAT",1,28.64,10,-0.76,0.09,2.64,1.06,0,">1 nonsynonymous","I2L T55K D97M P161S",4
"lib1","SARS-CoV-2","GGCGCATTTCTAAATT",5,1.24,NA,NA,NA,NA,NA,NA,"stop","I2G T55M Y91R F99* Y119W",5
"lib1","SARS-CoV-2","GGCGCCAGCCAATGAC",8,53.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2K S113C C158D",3
"lib1","SARS-CoV-2","GGCGCCAGGCAATACA",1,4.61,NA,NA,NA,NA,NA,NA,"stop","A14F S43P D59M K132* K199S",5
"lib1","SARS-CoV-2","GGCGCCAGTGGTATGA",10,71.83,10.71,-0.06,0.07,2.89,1.07,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","GGCGCCATGCATCCCT",1,36.32,9.25,-1.51,0.15,1.92,1.15,0.01,">1 nonsynonymous","A14L R27Q G116V",3
"lib1","SARS-CoV-2","GGCGCCGAGCCGATAA",4,57.1,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9V D90N F99S G146L F160G",5
"lib1","SARS-CoV-2","GGCGCCGTTCTAGATA",2,64.44,10.25,-0.52,0.06,2.86,1.05,0,">1 nonsynonymous","K114G V115A Q163L",3
"lib1","SARS-CoV-2","GGCGCGAATCCCTCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6I S41N V115* R136E",4
"lib1","SARS-CoV-2","GGCGCGACCGTATTTT",2,0.23,NA,NA,NA,NA,NA,NA,"stop","A14* G86D G155L",3
"lib1","SARS-CoV-2","GGCGCGAGCCCAATAC",6,61.33,10.83,0.06,0.07,2.86,1.03,0,"1 nonsynonymous","Q84M",1
"lib1","SARS-CoV-2","GGCGCGATCAATCTAA",1,20.49,10.92,0.15,0.13,2.89,1.04,0.01,"1 nonsynonymous","V37W",1
"lib1","SARS-CoV-2","GGCGCGATGATGGTGA",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V K56L I138V G174Q",4
"lib1","SARS-CoV-2","GGCGCTAACGCGCATA",2,9.76,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C6R S43A C49V L60D T201N",5
"lib1","SARS-CoV-2","GGCGCTAATTGCGGCA",1,22.98,9.03,-1.74,0.24,1.5,1.13,0.03,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","GGCGCTCAAAAAATCT",19,190.07,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37L D59V D97N V103F K198N",5
"lib1","SARS-CoV-2","GGCGCTCAAAAGCCTT",4,66.63,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9M Y35L F44L D90T D137Y",5
"lib1","SARS-CoV-2","GGCGCTCATTTTACAA",6,203.81,9.66,-1.1,0.07,2.77,1.05,0,">1 nonsynonymous","D59Y T63C F156L H189T",4
"lib1","SARS-CoV-2","GGCGCTCTTCCCCCAA",1,13.23,10.43,-0.33,0.15,2.68,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGCGCTCTTCTAAGAA",7,69.5,8.89,-1.87,0.18,1.5,1.14,0.01,">1 nonsynonymous","L60F S69K",2
"lib1","SARS-CoV-2","GGCGCTGCCTGGTTAC",5,51.27,10.63,-0.14,0.08,2.96,1.01,0,"1 nonsynonymous","D98M",1
"lib1","SARS-CoV-2","GGCGCTTAAATTTTCA",6,47.7,6,-4.76,0.79,1.5,1.13,0.01,">1 nonsynonymous","T3K F62P A89L K114A",4
"lib1","SARS-CoV-2","GGCGCTTTTAATCAGT",8,92.86,10.33,-0.44,0.04,2.91,1.01,0,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","GGCGGAAAAAGGACCC",4,108.86,10.61,-0.15,0.06,2.91,1.03,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","GGCGGACACCACAATT",3,0.61,NA,NA,NA,NA,NA,NA,"stop","A14V I104V G116F R136E Y165*",5
"lib1","SARS-CoV-2","GGCGGAGATAGCCTTA",3,9.12,8.9,-1.87,0.31,2.01,1.14,0.04,">1 nonsynonymous","Y143D Q163R V173A",3
"lib1","SARS-CoV-2","GGCGGATCAAGGTTTC",4,37.65,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L131V P161F",2
"lib1","SARS-CoV-2","GGCGGCAAACCAAATA",1,5.22,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P96Q W106Q S139L F185H",4
"lib1","SARS-CoV-2","GGCGGCATGAACACGA",4,20.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22K I88S D98V N151Y G166L G172Y",6
"lib1","SARS-CoV-2","GGCGGCGAAGGAGAAA",2,22.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35K C49F K56R",3
"lib1","SARS-CoV-2","GGCGGGAATTTAGCTT",8,133.09,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I28T S43L T55N R73S N107C",5
"lib1","SARS-CoV-2","GGCGGGGAGGTAACAC",5,103.05,10.39,-0.37,0.05,2.82,1.02,0,">1 nonsynonymous","A33T D59R V194I",3
"lib1","SARS-CoV-2","GGCGGTAAAATTCTAC",9,65.99,10.86,0.1,0.08,2.92,1.04,0,"1 nonsynonymous","A42K",1
"lib1","SARS-CoV-2","GGCGGTAACCTAAGTA",4,93.43,10.76,0,0.07,2.9,1.05,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","GGCGGTGGCAACGACA",1,18.86,10.44,-0.32,0.11,2.7,1,0.01,">1 nonsynonymous","N4S S139L S200R",3
"lib1","SARS-CoV-2","GGCGGTTTCAGTCAGC",10,1.7,NA,NA,NA,NA,NA,NA,"stop","S41* T63H Y123M",3
"lib1","SARS-CoV-2","GGCGGTTTTCTGATCT",1,35.07,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6I P96G N157I P197A",4
"lib1","SARS-CoV-2","GGCGTAATGGCAATAA",5,36.01,6.8,-3.97,0.41,1.5,1.24,0.03,">1 nonsynonymous","A42F G51C Y91I S129T",4
"lib1","SARS-CoV-2","GGCGTACAAACACATT",3,38.1,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y21V G86I P149R V153T",4
"lib1","SARS-CoV-2","GGCGTACAATCCTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18L S41* V103M Y143D",4
"lib1","SARS-CoV-2","GGCGTACAGAGTAAAA",7,132.67,9.93,-0.84,0.05,2.86,1.04,0,">1 nonsynonymous","K56D D90T E154V",3
"lib1","SARS-CoV-2","GGCGTACATTTTTACG",4,77.34,10.48,-0.29,0.04,2.87,1.04,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","GGCGTACTAGAAACAT",5,39.72,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","F99E",1
"lib1","SARS-CoV-2","GGCGTAGATAACTGAC",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S S36V Y91H K114G N120T N171S",6
"lib1","SARS-CoV-2","GGCGTAGCGGAAAACC",1,40.67,10.65,-0.11,0.06,2.98,1,0,">1 nonsynonymous","D59T A192S",2
"lib1","SARS-CoV-2","GGCGTAGGGATAGGGA",6,2.38,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib1","SARS-CoV-2","GGCGTAGTCACCAGGG",1,20.96,8.62,-2.14,0.17,2.35,1.06,0.01,">1 nonsynonymous","K26V T85E P161T",3
"lib1","SARS-CoV-2","GGCGTCAAAATTAAAA",2,5.79,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","D34L Y50I K56C N107W T148V",5
"lib1","SARS-CoV-2","GGCGTCTAAGTCATTG",5,88.92,10.33,-0.43,0.04,2.84,1,0,">1 nonsynonymous","Y35R T85R T201P",3
"lib1","SARS-CoV-2","GGCGTCTACAAGTATC",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H N120H",2
"lib1","SARS-CoV-2","GGCGTCTCCTAAAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","A18* G86R Y123R L183R",4
"lib1","SARS-CoV-2","GGCGTCTTACCATCAG",2,49.76,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L60D A81F P177V",3
"lib1","SARS-CoV-2","GGCGTGACTCTTCTAG",4,52.29,10.79,0.03,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCGTGCTTATGCACT",10,117.25,9.64,-1.13,0.07,2.03,1.09,0,">1 nonsynonymous","G116Q R127G",2
"lib1","SARS-CoV-2","GGCGTGGGGCCTCGAA",4,21.77,10.71,-0.05,0.07,2.94,1,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","GGCGTTAGCATCTAAA",3,35.19,10.79,0.02,0.11,2.9,1.05,0,"1 nonsynonymous","G152D",1
"lib1","SARS-CoV-2","GGCGTTAGGAACAATA",5,46.04,6,-4.76,2,3,1.12,0,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","GGCGTTATCACTAGTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","I138* G174Q",2
"lib1","SARS-CoV-2","GGCGTTCAATGTACGC",2,8.75,6.98,-3.79,0.15,1.5,1.06,0,">1 nonsynonymous","F17Q G83K C102R F160M",4
"lib1","SARS-CoV-2","GGCGTTCATATTATTA",5,30.7,6,-4.76,2,3,1.26,0.01,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","GGCGTTCCACGTCTTA",2,25.44,6.89,-3.87,0.38,1.5,1.13,0.03,">1 nonsynonymous","F12I G86S Y91N",3
"lib1","SARS-CoV-2","GGCGTTCGAATTCAAC",2,11.96,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","S53H S113W L162F",3
"lib1","SARS-CoV-2","GGCGTTCGCGCATGCA",5,102.48,10.82,0.05,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCGTTTAACACTTCA",1,10.69,10.84,0.07,0.13,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCTAAAAACGGTTGC",1,9.09,9.95,-0.81,0.35,2.23,1.05,0.04,">1 nonsynonymous","G101R I142Y V173T",3
"lib1","SARS-CoV-2","GGCTAAAACAGGCCCA",4,1.67,NA,NA,NA,NA,NA,NA,"stop","L95* F99L G174I",3
"lib1","SARS-CoV-2","GGCTAAAACATGTTGT",5,0.31,NA,NA,NA,NA,NA,NA,"stop","N30* D98F N120G G146W",4
"lib1","SARS-CoV-2","GGCTAAAACGAACCTT",1,14.77,10.23,-0.54,0.11,2.91,1.07,0.01,"1 nonsynonymous","F47T",1
"lib1","SARS-CoV-2","GGCTAAAATCAATGCG",4,47.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25K V71I D90Y",3
"lib1","SARS-CoV-2","GGCTAAAATCGGGAGT",1,9.06,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C6I L38D F126R S164F",4
"lib1","SARS-CoV-2","GGCTAAACAAAAGTCG",3,17.2,9.87,-0.9,0.13,1.93,1.03,0.01,">1 nonsynonymous","S45I D90M",2
"lib1","SARS-CoV-2","GGCTAAACGACATTGA",5,72.29,8.22,-2.54,0.17,2.71,1.06,0.01,">1 nonsynonymous","G146V G174E",2
"lib1","SARS-CoV-2","GGCTAAAGTGGCGACT",1,78.42,10.86,0.1,0.07,2.85,1.06,0,"1 nonsynonymous","K198G",1
"lib1","SARS-CoV-2","GGCTAACAGACAAACT",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A N107F G116I P169S",4
"lib1","SARS-CoV-2","GGCTAACATTCTGGAA",2,14.04,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","R25Q A33K L60S T140M",4
"lib1","SARS-CoV-2","GGCTAACCGTCCTAAT",3,15.69,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","F44Y C61R P82H N171I",4
"lib1","SARS-CoV-2","GGCTAACCTTCAAAAT",2,51.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V32Y S45C R136Q Y175K V181H",5
"lib1","SARS-CoV-2","GGCTAACGTCCTATAA",2,26.05,6,-4.76,1.29,2.11,1.22,0.03,">1 nonsynonymous","R136D G166I L183S P197W",4
"lib1","SARS-CoV-2","GGCTAACTGCAGTAAC",14,74.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6N A14Y V37A D90F Y143L",5
"lib1","SARS-CoV-2","GGCTAAGAATTATGCG",1,41.03,8.18,-2.58,0.12,2.53,1.14,0.01,">1 nonsynonymous","S41C C61H Y175Q T201S",4
"lib1","SARS-CoV-2","GGCTAAGCTCATACCG",5,63.72,10.53,-0.23,0.05,2.85,1.08,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","GGCTAAGGTCAATTTA",13,146.24,10.5,-0.27,0.05,2.94,1.04,0,">1 nonsynonymous","T15R N120R S200K",3
"lib1","SARS-CoV-2","GGCTAAGGTTGTATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2A A81*",2
"lib1","SARS-CoV-2","GGCTAAGTATGAATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","V37L I104* L131S",3
"lib1","SARS-CoV-2","GGCTAATAAGATATTG",3,89.72,8.35,-2.42,0.13,2.74,1.02,0.01,">1 nonsynonymous","C61L K87M A145V T170H",4
"lib1","SARS-CoV-2","GGCTAATAAGTACGTA",1,28.64,10.38,-0.39,0.11,2.92,1.06,0.01,"1 nonsynonymous","Y21W",1
"lib1","SARS-CoV-2","GGCTAATACCCACAGG",4,57.53,10.01,-0.76,0.11,2.31,1,0,">1 nonsynonymous","K94M T148N T201Y",3
"lib1","SARS-CoV-2","GGCTAATCGAGGTGAG",4,12.21,7.54,-3.23,0.46,1.5,1.25,0.06,">1 nonsynonymous","F47L A105R",2
"lib1","SARS-CoV-2","GGCTAATTAAAAGGGA",1,54.87,10.68,-0.09,0.08,2.87,1.05,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","GGCTACAACCTAATGT",3,42.15,6.53,-4.24,0.41,1.5,1.15,0.02,">1 nonsynonymous","V71S K87T G146T",3
"lib1","SARS-CoV-2","GGCTACACACTAGTAT",5,51.15,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I72L N107Y D112M F167T",4
"lib1","SARS-CoV-2","GGCTACACGCCAACTA",10,21.57,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P54S Y121W G155H L183D",4
"lib1","SARS-CoV-2","GGCTACAGATACTCCT",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N S53W Y123N N130V S139C",5
"lib1","SARS-CoV-2","GGCTACCACGTTGTCC",5,18.42,9.66,-1.1,0.31,1.5,1.02,0.03,">1 nonsynonymous","E10T D59L D98L",3
"lib1","SARS-CoV-2","GGCTACCGCGAAAATA",5,11.98,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","A14L Y93C G117F",3
"lib1","SARS-CoV-2","GGCTACGCTCACCGTA",2,14.48,8.91,-1.86,0.15,2.36,1.12,0.01,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","GGCTACGGAAAGGTGC",1,10.96,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","R25V A89S",2
"lib1","SARS-CoV-2","GGCTACGGGGAATTAG",4,39.02,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y143L V180Y",2
"lib1","SARS-CoV-2","GGCTACTAAGATAATA",8,79.15,10.51,-0.25,0.06,2.9,1,0,">1 nonsynonymous","F134N N151L",2
"lib1","SARS-CoV-2","GGCTACTGACAGTGAG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","L5* F62S V103I",3
"lib1","SARS-CoV-2","GGCTAGAAATTGGACA",1,5.82,10.67,-0.09,0.29,2.65,1,0.02,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","GGCTAGATCCCGGTAT",6,201.98,9.19,-1.57,0.05,2.93,1.06,0,">1 nonsynonymous","P7D F62V N157H",3
"lib1","SARS-CoV-2","GGCTAGCCAAAAGGCT",4,3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141P",1
"lib1","SARS-CoV-2","GGCTAGCGGATAGCAA",5,11.27,8.57,-2.2,0.21,1.5,1.13,0.03,">1 nonsynonymous","F8L C61M K94G G152N",4
"lib1","SARS-CoV-2","GGCTAGGTTGCCACTA",1,14.69,10.48,-0.28,0.11,2.83,1.02,0,">1 nonsynonymous","T140P V173Q",2
"lib1","SARS-CoV-2","GGCTAGTATGCTACCG",2,31.45,10.39,-0.37,0.06,2.87,1.01,0,"1 nonsynonymous","W106F",1
"lib1","SARS-CoV-2","GGCTAGTTCATTTGTA",5,0.13,NA,NA,NA,NA,NA,NA,"stop","L5* L38Q V77G R136L",4
"lib1","SARS-CoV-2","GGCTATAAACCGCTAG",5,57.27,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S36W G51S G86S L125M",4
"lib1","SARS-CoV-2","GGCTATAACAGCATTC",1,85.09,9.35,-1.42,0.11,1.99,1.1,0,">1 nonsynonymous","Y21S E154N",2
"lib1","SARS-CoV-2","GGCTATAATAGACCAA",2,68.8,10.41,-0.35,0.06,2.86,1.06,0,"1 nonsynonymous","P169N",1
"lib1","SARS-CoV-2","GGCTATAGAACTAATA",4,47.51,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L5N N40M G146W F156R G172T",5
"lib1","SARS-CoV-2","GGCTATATCAGAGATA",4,59.15,8.51,-2.26,0.25,1.5,1.1,0.02,">1 nonsynonymous","R27K S36G F47T T85A E135M",5
"lib1","SARS-CoV-2","GGCTATATTTGGTAAC",7,95.75,10.77,0.01,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCTATATTTTACCGC",3,29.44,10.44,-0.33,0.1,2.76,1.17,0.01,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","GGCTATCAAATAGAGC",8,20.39,9.77,-0.99,0.24,1.96,1.07,0.02,">1 nonsynonymous","C6F T15N N151I",3
"lib1","SARS-CoV-2","GGCTATCCTTATATAT",1,11.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37I P82Q A89S D98A N118T G166M",6
"lib1","SARS-CoV-2","GGCTATCGAATATCTA",2,24.04,10.16,-0.6,0.13,2.57,1.05,0.01,"1 nonsynonymous","Y21S",1
"lib1","SARS-CoV-2","GGCTATCTTACCTACG",6,54.98,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","R25E N120I E141I G174F",4
"lib1","SARS-CoV-2","GGCTATGAAAGAAGAG",5,12.82,7.84,-2.93,0.66,1.5,1.21,0.05,">1 nonsynonymous","I72Q K94G V103K F167M",4
"lib1","SARS-CoV-2","GGCTATGAACAGCCAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L C61G V181A K198V",4
"lib1","SARS-CoV-2","GGCTATGGAGCAGATA",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R D75R C150W Y178I",4
"lib1","SARS-CoV-2","GGCTATGTTAGCCGAA",1,11.68,7.19,-3.57,0.29,1.5,1.07,0.02,">1 nonsynonymous","S36I A42H C61V V77R E141S P149S",6
"lib1","SARS-CoV-2","GGCTATTTAGACATGA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","S41L G166*",2
"lib1","SARS-CoV-2","GGCTCAACAAAAACTT",11,84.36,10.45,-0.31,0.09,2.79,1.01,0,">1 nonsynonymous","S139C T148L T201M",3
"lib1","SARS-CoV-2","GGCTCAACCCTTAAAC",4,0.8,NA,NA,NA,NA,NA,NA,"stop","S45L C49V I72E A81* D90L W106I P149N",7
"lib1","SARS-CoV-2","GGCTCAAGAACAGCTA",2,72.2,9.39,-1.37,0.09,2.38,1.08,0,">1 nonsynonymous","G9W Y21T K87T K132S",4
"lib1","SARS-CoV-2","GGCTCAATGACAAAAC",8,169.7,8.83,-1.93,0.08,2.87,1.08,0,"1 nonsynonymous","Y159M",1
"lib1","SARS-CoV-2","GGCTCAATTCAAATGA",8,156.94,8.44,-2.33,0.14,1.91,1.14,0.01,">1 nonsynonymous","N107D N120I",2
"lib1","SARS-CoV-2","GGCTCACAAAAGCTGT",8,2.73,NA,NA,NA,NA,NA,NA,"stop","F12D F17G K56* T63L R73F Y123F C195S",7
"lib1","SARS-CoV-2","GGCTCACAACCAATAG",1,14.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G101D T201D",2
"lib1","SARS-CoV-2","GGCTCACAATGCTGAG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","I28* D90E F99C",3
"lib1","SARS-CoV-2","GGCTCAGGACATTTTA",3,93.51,8.19,-2.57,0.17,1.71,1.12,0.01,"1 nonsynonymous","R179V",1
"lib1","SARS-CoV-2","GGCTCAGGCCCTTTTT",4,0,NA,NA,NA,NA,NA,NA,"stop","V37S Q84M Q168H Y178*",4
"lib1","SARS-CoV-2","GGCTCAGGTCAACTTT",7,30.35,7.16,-3.61,0.32,1.5,1.07,0.03,">1 nonsynonymous","Y21L S69L L122K R136I E154Q",5
"lib1","SARS-CoV-2","GGCTCATACATAAAAT",4,0.91,NA,NA,NA,NA,NA,NA,"stop","F8D N24S T55R F156*",4
"lib1","SARS-CoV-2","GGCTCATGCCCAGCTT",1,46.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3S R16T V37A T63W F134C P177S",6
"lib1","SARS-CoV-2","GGCTCATTTTACCATC",1,17.07,10.69,-0.08,0.1,2.83,1.16,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGCTCCAATGTCCGGA",1,10.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6V G51F K94H",3
"lib1","SARS-CoV-2","GGCTCCACAATCCATA",3,8.24,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A14L R73K V103T",3
"lib1","SARS-CoV-2","GGCTCCACTACAAAAT",10,115.17,6.91,-3.86,0.24,1.5,1.1,0.01,">1 nonsynonymous","N24R D98V S113E",3
"lib1","SARS-CoV-2","GGCTCCATATTCAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* D59T F99I",3
"lib1","SARS-CoV-2","GGCTCCCCCCCGCTAA",4,32.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40D P82T N109P",3
"lib1","SARS-CoV-2","GGCTCCCGTTGACAGT",1,24.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S53I D90F Y165I",3
"lib1","SARS-CoV-2","GGCTCCGACGTCCCCG",6,126.54,10.03,-0.74,0.05,2.8,1.03,0,">1 nonsynonymous","I138E G152I",2
"lib1","SARS-CoV-2","GGCTCCGGCAGAATAT",3,1.52,NA,NA,NA,NA,NA,NA,"stop","V20P D68* T148I S164D",4
"lib1","SARS-CoV-2","GGCTCCGTCAAGAGTA",3,11.14,8.97,-1.8,0.37,1.64,1.26,0.06,">1 nonsynonymous","L95I R127H N151S",3
"lib1","SARS-CoV-2","GGCTCCTAGCCTACTC",9,1.43,NA,NA,NA,NA,NA,NA,"stop","F99L N120*",2
"lib1","SARS-CoV-2","GGCTCGAATGGTCTCT",3,56.61,10.8,0.04,0.09,2.86,1.08,0,">1 nonsynonymous","C61M S147P",2
"lib1","SARS-CoV-2","GGCTCGAGATGGAAAG",6,36.73,7.57,-3.19,0.23,1.5,1.15,0.02,">1 nonsynonymous","F17V A105M Y123R",3
"lib1","SARS-CoV-2","GGCTCGAGTCACAATC",3,25.06,10.27,-0.49,0.13,2.53,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGCTCGCTACGGAGAG",2,32.34,6.31,-4.45,0.6,1.5,1.2,0.02,">1 nonsynonymous","R25K D75S Q144K",3
"lib1","SARS-CoV-2","GGCTCGGCCCCTGTAA",2,10.38,6.4,-4.36,0.51,1.5,1.06,0.02,">1 nonsynonymous","S45P P133Y N151S Y165E",4
"lib1","SARS-CoV-2","GGCTCTAAAACGAATA",7,58.75,10.71,-0.06,0.05,2.9,1.03,0,">1 nonsynonymous","C61N S139N",2
"lib1","SARS-CoV-2","GGCTCTAAGCCAACCT",5,0.07,NA,NA,NA,NA,NA,NA,"stop","R73A K94Y Y165G P197*",4
"lib1","SARS-CoV-2","GGCTCTACATAGATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","GGCTCTAGAGAGAAAC",6,0.52,NA,NA,NA,NA,NA,NA,"stop","G9N S53P E76G P82* V103K N110V Y119N I142S",8
"lib1","SARS-CoV-2","GGCTCTCAATATCGCA",3,34,7.91,-2.85,0.43,1.5,1,0.07,"1 nonsynonymous","F99A",1
"lib1","SARS-CoV-2","GGCTCTCCAAAACAGT",3,40.12,10.6,-0.16,0.12,2.92,1.04,0.01,">1 nonsynonymous","P7D R78T",2
"lib1","SARS-CoV-2","GGCTCTCCTGACGATG",7,136.23,10.77,0.01,0.05,2.93,1.05,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","GGCTCTGAGAAAACAC",3,56.06,6,-4.76,1.97,1.5,1.1,0,">1 nonsynonymous","G101N N107E",2
"lib1","SARS-CoV-2","GGCTCTGCTTGCACAT",7,176.24,10.57,-0.19,0.04,2.87,1.03,0,">1 nonsynonymous","A42S D97R",2
"lib1","SARS-CoV-2","GGCTCTTACACCATTT",5,12.78,9.34,-1.42,0.25,2.04,1.15,0.02,"1 nonsynonymous","I138T",1
"lib1","SARS-CoV-2","GGCTGAAACCTCTTTG",3,106.81,10.39,-0.37,0.02,2.94,1.02,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","GGCTGAACTAAAAAGC",10,35.82,9.95,-0.81,0.11,1.95,1.03,0,">1 nonsynonymous","N1Y S45V E141N E154S",4
"lib1","SARS-CoV-2","GGCTGAAGTTACAGCT",2,18.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E T85R I88R R124P",4
"lib1","SARS-CoV-2","GGCTGAAGTTCTAAAC",3,51.59,6,-4.76,1.52,1.5,1.12,0.02,">1 nonsynonymous","S19K F44D L60G",3
"lib1","SARS-CoV-2","GGCTGAATCACAGAAA",5,46.79,9.98,-0.79,0.11,2.28,1.06,0.01,">1 nonsynonymous","Q84L G152L",2
"lib1","SARS-CoV-2","GGCTGACATTTTACGT",2,24.07,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y50I S113R",2
"lib1","SARS-CoV-2","GGCTGAGAATCTAGGA",5,76.86,9.88,-0.88,0.12,2.31,1.07,0.01,">1 nonsynonymous","C61F D90R S129L C195I",4
"lib1","SARS-CoV-2","GGCTGAGAGTTAAACT",4,31.6,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L5Q T63K F99P G146L Y178T",5
"lib1","SARS-CoV-2","GGCTGAGCAGTATTCT",7,109.24,7.33,-3.43,0.32,1.5,1.16,0.03,">1 nonsynonymous","A105L T140D",2
"lib1","SARS-CoV-2","GGCTGAGTGAATCCGA",9,143.71,9.94,-0.82,0.05,2.89,1.04,0,"1 nonsynonymous","A145R",1
"lib1","SARS-CoV-2","GGCTGATGCCCAACCG",3,28.34,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y93K K94N L125C G155L",4
"lib1","SARS-CoV-2","GGCTGATGTTTCGTTT",1,1.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","GGCTGATTAATCTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","K94Y S200*",2
"lib1","SARS-CoV-2","GGCTGCACACATACAC",19,1.57,NA,NA,NA,NA,NA,NA,"stop","E10L C49G D97S E141*",4
"lib1","SARS-CoV-2","GGCTGCAGAACACTTC",1,23.17,10.53,-0.23,0.07,2.99,1.02,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","GGCTGCAGGTAACGGT",3,70.05,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44E K94P N120G S164V A190S",5
"lib1","SARS-CoV-2","GGCTGCCAATAACATA",9,1.35,NA,NA,NA,NA,NA,NA,"stop","P7* F12E D90C E141F P149Y",5
"lib1","SARS-CoV-2","GGCTGCCCATAAAAGA",7,62.7,10.71,-0.05,0.03,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCTGCCGAATAAAGT",1,24.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39K G51Y P82T P96I N130Y Q163F",6
"lib1","SARS-CoV-2","GGCTGCCGCTTAAAAA",8,181.26,6,-4.76,1.93,1.5,1.14,0.01,">1 nonsynonymous","N24Y S43P P177L",3
"lib1","SARS-CoV-2","GGCTGCCTAACCGGAT",1,67.96,10.78,0.01,0.04,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGCTGCCTTTAACAGG",7,21.1,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A14V T15S F44V Q79A A89S I142T Y165L",7
"lib1","SARS-CoV-2","GGCTGCGGCCACAAGC",11,178.05,10.29,-0.47,0.05,2.85,1.01,0,">1 nonsynonymous","G9Q R27G",2
"lib1","SARS-CoV-2","GGCTGCTCAAAATAAC",3,24.99,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","Y35R S45C G51R L95C A105N R136N N157V",7
"lib1","SARS-CoV-2","GGCTGCTGCCAACAAA",6,0.41,NA,NA,NA,NA,NA,NA,"stop","F70E L125* N157T",3
"lib1","SARS-CoV-2","GGCTGGAACCCTTGAC",5,42.69,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F99G Y178N",2
"lib1","SARS-CoV-2","GGCTGGAATTAAAAGT",3,27.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F17L T55L W106H Y121H Q168Y",5
"lib1","SARS-CoV-2","GGCTGGACCTAAGATA",6,71.96,9.76,-1,0.05,2.85,1.06,0,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","GGCTGGAGGCACACTT",1,7.53,9.24,-1.53,0.32,1.86,1.2,0.03,">1 nonsynonymous","K87S W106L",2
"lib1","SARS-CoV-2","GGCTGGATAAGATTAA",5,13.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6F N120P D137W",3
"lib1","SARS-CoV-2","GGCTGGCAACAAGACC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19L I28L Y35D Y91* Q168S",5
"lib1","SARS-CoV-2","GGCTGGCCCAGACACT",3,14.09,9.35,-1.42,0.42,1.66,1.03,0.06,"1 nonsynonymous","R25A",1
"lib1","SARS-CoV-2","GGCTGGGCAACTTTGG",5,116.85,10.07,-0.69,0.07,2.53,1.07,0,">1 nonsynonymous","P133H F160S",2
"lib1","SARS-CoV-2","GGCTGGGTTAATCAAC",5,31.63,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","Y91P E154G",2
"lib1","SARS-CoV-2","GGCTGGTTTTTCTAAG",1,21.48,10.72,-0.05,0.03,2.95,1.02,0,">1 nonsynonymous","K56I H189K T201G",3
"lib1","SARS-CoV-2","GGCTGTAGAAACCAGA",1,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E Y50Q",2
"lib1","SARS-CoV-2","GGCTGTAGGCCTAGTC",4,49.26,10.69,-0.07,0.06,2.9,1.05,0,"1 nonsynonymous","K87Y",1
"lib1","SARS-CoV-2","GGCTGTATACACACTG",7,0.19,NA,NA,NA,NA,NA,NA,"stop","E10* A14W Y35D C158Q T170E",5
"lib1","SARS-CoV-2","GGCTGTATTCATAAAC",3,67.74,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S29L Y50S K199Q",3
"lib1","SARS-CoV-2","GGCTGTCCGACTTCCT",2,13.86,7.71,-3.06,0.18,1.88,1.07,0.01,">1 nonsynonymous","S45A Y91L N157T",3
"lib1","SARS-CoV-2","GGCTGTGCACAGATAA",3,21.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95F N118M",2
"lib1","SARS-CoV-2","GGCTGTTACACTTCGA",6,6.64,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5R T15Y D34C N107D",4
"lib1","SARS-CoV-2","GGCTGTTTTAAGAGAC",2,37.05,10.87,0.11,0.08,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GGCTGTTTTTGCGTAA",6,65.04,9.82,-0.94,0.14,1.87,1.08,0.01,">1 nonsynonymous","T15K E76T",2
"lib1","SARS-CoV-2","GGCTTAAGAAAATCGC",2,59.79,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T100P N120V Q144H G155L V173Y",5
"lib1","SARS-CoV-2","GGCTTAAGCACGTTCT",5,55.87,9.66,-1.1,0.15,1.8,1.05,0.01,">1 nonsynonymous","Q84P T148R",2
"lib1","SARS-CoV-2","GGCTTAAGGTTGTCCT",2,49.98,8.6,-2.16,0.08,1.74,1.15,0,">1 nonsynonymous","F12A T55Q Y123S G152Q V173K",5
"lib1","SARS-CoV-2","GGCTTAATGATAAGAA",2,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C Y66G I88E D137T P149F",5
"lib1","SARS-CoV-2","GGCTTAATTTTCAAAA",5,1.57,NA,NA,NA,NA,NA,NA,"stop","T55* L60I F160W",3
"lib1","SARS-CoV-2","GGCTTACATTTAATAA",14,162.18,10.27,-0.49,0.04,2.75,1.06,0,">1 nonsynonymous","K128I P191I",2
"lib1","SARS-CoV-2","GGCTTACCCCTTCACA",3,9.21,7.58,-3.18,0.35,1.5,1.1,0.03,">1 nonsynonymous","P7T N13L P96Q R179T V180F",5
"lib1","SARS-CoV-2","GGCTTAGACAGGATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* K94S I138* N157V",4
"lib1","SARS-CoV-2","GGCTTAGCACTGTTGA",7,145.98,8.69,-2.08,0.09,2.89,1.1,0,">1 nonsynonymous","V37L C61A N157E",3
"lib1","SARS-CoV-2","GGCTTAGGATGACAAA",1,1.55,NA,NA,NA,NA,NA,NA,"stop","F17* E76M G116Y V173I",4
"lib1","SARS-CoV-2","GGCTTAGTATTAATTT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40I A67I L95P V103Y Y121H V173T",6
"lib1","SARS-CoV-2","GGCTTATACAAGCTAC",1,41.85,6.2,-4.56,0.85,1.5,1.19,0.03,">1 nonsynonymous","T55N P82S D112T",3
"lib1","SARS-CoV-2","GGCTTATAGCATGTTA",4,27.32,6.7,-4.06,0.37,1.5,1.1,0.02,">1 nonsynonymous","P7Y Y93G Y119W C150F",4
"lib1","SARS-CoV-2","GGCTTCAAGTTCTAAA",6,48.22,9.46,-1.31,0.08,2.16,1.08,0,"1 nonsynonymous","N107V",1
"lib1","SARS-CoV-2","GGCTTCACCATACCAC",9,0,NA,NA,NA,NA,NA,NA,"stop","A89L R136Q Q176* S200T",4
"lib1","SARS-CoV-2","GGCTTCAGGCACTTGG",2,21.22,9.75,-1.02,0.2,1.94,1.05,0.02,">1 nonsynonymous","G86N E141D",2
"lib1","SARS-CoV-2","GGCTTCCAAACACGTC",2,12.47,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L60V D112H Y119N",3
"lib1","SARS-CoV-2","GGCTTCCTTAGACTTA",1,16.66,10.54,-0.23,0.12,2.75,1.25,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGCTTCGACCGACAAA",4,104.41,10.55,-0.22,0.07,2.9,1.05,0,">1 nonsynonymous","T46I T55A G83L I138T",4
"lib1","SARS-CoV-2","GGCTTCGACGCCATCG",6,7.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3M V65P T85C D98L L131W",5
"lib1","SARS-CoV-2","GGCTTCGCCGTTTAAG",2,20.64,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","E10L D34G S43Y P133Y C150I",5
"lib1","SARS-CoV-2","GGCTTCTATACAACAC",4,23.62,7.4,-3.37,0.33,1.5,1.1,0.05,">1 nonsynonymous","D98I E135H E141M F167S",4
"lib1","SARS-CoV-2","GGCTTCTTAAGCCCTA",1,5.62,8.79,-1.98,0.29,1.5,1,0.05,">1 nonsynonymous","F8G P54S F134M K199L",4
"lib1","SARS-CoV-2","GGCTTGAACAAATATA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","A14N R127T F156* Y175*",4
"lib1","SARS-CoV-2","GGCTTGACCAGTATAT",5,51.91,6.45,-4.31,0.56,1.5,1.15,0.03,">1 nonsynonymous","R25W D34F Y39F I104L E135V",5
"lib1","SARS-CoV-2","GGCTTGAGGTGGCGTA",14,109.25,8.91,-1.85,0.08,2.89,1.05,0,">1 nonsynonymous","R16N S113Q",2
"lib1","SARS-CoV-2","GGCTTGATAACAAACA",10,1.42,NA,NA,NA,NA,NA,NA,"stop","F8S D59*",2
"lib1","SARS-CoV-2","GGCTTGATAGTAGAAA",2,12.26,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V11P P161Q",2
"lib1","SARS-CoV-2","GGCTTGATTCTACAGG",2,42.87,NA,NA,NA,NA,NA,NA,"stop","Y50C N92*",2
"lib1","SARS-CoV-2","GGCTTGCAAGACGAGC",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S53L V173L",3
"lib1","SARS-CoV-2","GGCTTGCATACACATT",5,167.38,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G116N K128L N151T G172L P197R",5
"lib1","SARS-CoV-2","GGCTTGCGAATTCCAA",10,111.6,9.24,-1.53,0.14,1.71,1.09,0.01,">1 nonsynonymous","F8G R16H V65L",3
"lib1","SARS-CoV-2","GGCTTTAAAACTCACT",1,16.03,6.65,-4.12,0.34,1.5,1.16,0.02,">1 nonsynonymous","T3L G86M K94H",3
"lib1","SARS-CoV-2","GGCTTTAACAGTCGTA",1,10.91,10.22,-0.55,0.19,2.66,1.05,0.02,">1 nonsynonymous","S53L I104T",2
"lib1","SARS-CoV-2","GGCTTTAACCTACGCC",2,25.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R27K C61T K94Y G146T",4
"lib1","SARS-CoV-2","GGCTTTAATAGAATCT",6,106.44,10.54,-0.22,0.07,2.76,1.02,0,">1 nonsynonymous","N1E K56V I138H",3
"lib1","SARS-CoV-2","GGCTTTACCTCTTACT",1,21.32,10.49,-0.28,0.07,3,1.01,0,">1 nonsynonymous","V37L Q84L",2
"lib1","SARS-CoV-2","GGCTTTACGGGCTTTT",3,66.6,8.32,-2.44,0.15,2.5,1.08,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","GGCTTTAGAAACATAA",2,48.32,9.65,-1.11,0.07,2.84,1.06,0,">1 nonsynonymous","I142E K199S",2
"lib1","SARS-CoV-2","GGCTTTAGGACTGACA",1,56.4,10.75,-0.01,0.06,2.92,1.03,0,">1 nonsynonymous","S139V Q168H",2
"lib1","SARS-CoV-2","GGCTTTAGGAGAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G51S",2
"lib1","SARS-CoV-2","GGCTTTATCATTCATC",1,35.17,10.77,0,0.04,2.96,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GGCTTTCACTATAGTC",2,52.5,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12D K94Y Y119C",3
"lib1","SARS-CoV-2","GGCTTTCCCAAGCCTG",7,82.39,8.46,-2.31,0.18,1.97,1.14,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","GGCTTTCCCTCTGTTA",5,45.2,10.65,-0.12,0.05,2.92,1.03,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","GGCTTTCGAATTCCTA",9,137.94,7.59,-3.17,0.27,1.5,1.08,0.02,">1 nonsynonymous","S36A L162S",2
"lib1","SARS-CoV-2","GGCTTTCTGTTACCCT",4,23.41,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","P7G A81L F167E V173C",4
"lib1","SARS-CoV-2","GGCTTTCTTAGAATTT",8,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56V S139D",2
"lib1","SARS-CoV-2","GGCTTTGCCTCATCGC",3,62.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5M V20G N120L R136V Y178S",5
"lib1","SARS-CoV-2","GGCTTTGTTAACATAC",2,20.82,10.2,-0.57,0.14,2.64,1.06,0.02,">1 nonsynonymous","N64S D90V",2
"lib1","SARS-CoV-2","GGCTTTTATAAGTATG",1,19.29,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F44A N64V G83C C158R",4
"lib1","SARS-CoV-2","GGGAAAAACCACTAAT",7,156.61,7.1,-3.66,0.15,1.58,1.11,0.01,">1 nonsynonymous","A22S S43N K87L S113L",4
"lib1","SARS-CoV-2","GGGAAAAAGTTGCACA",1,55.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4G N92M F134Q",3
"lib1","SARS-CoV-2","GGGAAAAATAAAGTTC",2,11.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A18S D90M A105S F156Y Y175T",5
"lib1","SARS-CoV-2","GGGAAAAATGCTAGGC",2,25.14,10.69,-0.08,0.08,2.97,1.02,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","GGGAAAACCATCATAA",4,112.39,10.05,-0.72,0.06,2.62,1.07,0,">1 nonsynonymous","S69M R78M",2
"lib1","SARS-CoV-2","GGGAAAACCGAATTAT",7,57.01,6.12,-4.65,0.53,1.5,1.13,0.01,">1 nonsynonymous","N107W G166Y",2
"lib1","SARS-CoV-2","GGGAAAACTTCGACCC",1,7.59,8.37,-2.39,0.15,2.94,1.03,0.02,">1 nonsynonymous","N13H T170C",2
"lib1","SARS-CoV-2","GGGAAAAGGATTTCAA",4,63.78,10.59,-0.17,0.07,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGAAAATAATTCTGA",1,5.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S W106I Y119G",3
"lib1","SARS-CoV-2","GGGAAAATGAGTTAAG",3,58.1,9.76,-1.01,0.09,1.91,1.05,0,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","GGGAAAATGCATAAAA",4,91.93,10.62,-0.15,0.03,2.94,1.01,0,">1 nonsynonymous","T55I G196T",2
"lib1","SARS-CoV-2","GGGAAAATGCGACCAA",2,63.31,8.78,-1.98,0.08,2.51,1.14,0,">1 nonsynonymous","G146V L187H",2
"lib1","SARS-CoV-2","GGGAAACAAACACTGC",11,121.37,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V77E Y175V",2
"lib1","SARS-CoV-2","GGGAAACCATATTTCT",5,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56H G86M N107H I142R",4
"lib1","SARS-CoV-2","GGGAAAGAGAATCTGA",4,47.81,10.07,-0.7,0.08,2.71,1.06,0,">1 nonsynonymous","G51E I138L",2
"lib1","SARS-CoV-2","GGGAAAGCCAACAATA",6,176.84,10.74,-0.03,0.04,2.93,1.03,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","GGGAAAGCCTTTTCAG",6,6.14,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","L95Q V103M L122F Y165R",4
"lib1","SARS-CoV-2","GGGAAATAAGGGCTAT",1,6.9,10.84,0.07,0.21,2.69,1.21,0.01,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","GGGAAATAATAAGAAG",3,27.97,10.88,0.11,0.09,2.8,1.18,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","GGGAAATATACCTCCA",4,8.18,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","T3L F44G T63S G116R N130T L162K R179F",7
"lib1","SARS-CoV-2","GGGAAATCGAGAATAC",5,0.71,NA,NA,NA,NA,NA,NA,"stop","F17* V37L N107F E141Y",4
"lib1","SARS-CoV-2","GGGAACAAAAAGGTAC",8,34.75,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A105L Y121L G146V",3
"lib1","SARS-CoV-2","GGGAACAAAATCAACA",5,118.23,10.78,0.02,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGAACAAACCTCCAA",1,32.41,8.64,-2.13,0.13,2.37,1.13,0.01,">1 nonsynonymous","Y35F D112Y",2
"lib1","SARS-CoV-2","GGGAACAAGATAGCCT",1,13,8.52,-2.24,0.41,1.5,1,0.07,">1 nonsynonymous","F12K K56W",2
"lib1","SARS-CoV-2","GGGAACAAGGTAACAT",1,24.2,9.55,-1.22,0.09,2.88,1.1,0,">1 nonsynonymous","T3M Y119T K198S",3
"lib1","SARS-CoV-2","GGGAACAGGAAGCAGT",6,134.51,10.14,-0.63,0.08,2.52,1.02,0,">1 nonsynonymous","T100I W106K N120G",3
"lib1","SARS-CoV-2","GGGAACATATATATCT",20,365.99,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1D Q163G P177L",3
"lib1","SARS-CoV-2","GGGAACATGAGTGACT",2,3.2,NA,NA,NA,NA,NA,NA,"stop","L95* S184V",2
"lib1","SARS-CoV-2","GGGAACCACAACCGAA",2,33.5,10.62,-0.14,0.05,2.84,1.16,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","GGGAACGAAATCGACT",6,163.05,10.77,0.01,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGAACTCCGTCGCGA",1,1.84,NA,NA,NA,NA,NA,NA,"stop","N4T E76*",2
"lib1","SARS-CoV-2","GGGAACTCGCTATCCC",5,155.73,10.06,-0.71,0.04,2.85,1.04,0,">1 nonsynonymous","I80M K87I",2
"lib1","SARS-CoV-2","GGGAAGAAACTTCAAA",1,18.87,10.49,-0.28,0.34,1.68,1,0.04,">1 nonsynonymous","T55N V103R",2
"lib1","SARS-CoV-2","GGGAAGAAATTGATAG",2,39.62,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","I28R L57S P82R Y143I",4
"lib1","SARS-CoV-2","GGGAAGAAGATCCTTG",1,40.48,9.56,-1.2,0.07,2.73,1.08,0,">1 nonsynonymous","F12L T46I Y119D G166N K199T",5
"lib1","SARS-CoV-2","GGGAAGAAGGATATGG",3,117.74,10.78,0.02,0.08,2.92,1.04,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","GGGAAGATATCTACTG",24,8.05,NA,NA,NA,NA,NA,NA,"stop","E10* N120* S200T",3
"lib1","SARS-CoV-2","GGGAAGCAATTATCAA",2,0.91,NA,NA,NA,NA,NA,NA,"stop","A42* S69V P82Q Y91C N120V",5
"lib1","SARS-CoV-2","GGGAAGCGAGAGTCCA",3,27.4,8.09,-2.68,0.41,1.5,1.11,0.05,">1 nonsynonymous","P54K P82A N120R R136H",4
"lib1","SARS-CoV-2","GGGAAGGAATTGCGTT",6,2.52,NA,NA,NA,NA,NA,NA,"stop","S36C C150*",2
"lib1","SARS-CoV-2","GGGAAGGACCAAACTT",3,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P F47C R127V F134P T170I",5
"lib1","SARS-CoV-2","GGGAAGGTTTTGGACT",3,17.15,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1I E10L L95A L122M",4
"lib1","SARS-CoV-2","GGGAAGTATAGTCGAA",2,25.83,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I28T Y50I",2
"lib1","SARS-CoV-2","GGGAATAAACATTAAA",10,104.21,10.29,-0.47,0.05,2.91,1.03,0,">1 nonsynonymous","S147P T170Y",2
"lib1","SARS-CoV-2","GGGAATAACACGACGG",6,112.9,10.22,-0.55,0.06,2.72,1.01,0,">1 nonsynonymous","A14L V173M L187S",3
"lib1","SARS-CoV-2","GGGAATAACCGAATTA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","R27M S43* L60C G116V V181A",5
"lib1","SARS-CoV-2","GGGAATAAGCTTTGAG",5,89.19,10.26,-0.51,0.05,2.91,1.05,0,">1 nonsynonymous","N40W K87M K199L",3
"lib1","SARS-CoV-2","GGGAATAATGACTGTG",12,99.08,9.74,-1.02,0.11,2.47,1.08,0,">1 nonsynonymous","G9R T15K N107S L122W",4
"lib1","SARS-CoV-2","GGGAATACACTCCTTG",4,153.73,8.53,-2.23,0.11,2.82,1.05,0,"1 nonsynonymous","Y143N",1
"lib1","SARS-CoV-2","GGGAATACTACCCACC",1,34.11,10.87,0.11,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGAATAGTTAAGATC",12,4.62,NA,NA,NA,NA,NA,NA,"stop","L5A A18M V37E L60V A89C C102S L122* P149Q F160N",9
"lib1","SARS-CoV-2","GGGAATATAAAGCCAA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D T55V C61M G155A",4
"lib1","SARS-CoV-2","GGGAATATCATGCCTA",1,23.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y66T Y93L D112H N120Q Y165S",5
"lib1","SARS-CoV-2","GGGAATCAAGTCCAAT",1,6.26,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5M C49R K87P L122S S164Y G196R",6
"lib1","SARS-CoV-2","GGGAATCACGGCAACC",1,1.21,NA,NA,NA,NA,NA,NA,"stop","K94C N107A T140H G152S Q176*",5
"lib1","SARS-CoV-2","GGGAATCATGAATGGA",2,37.66,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6T V20Q N40K F134I E141S L183F",6
"lib1","SARS-CoV-2","GGGAATCCTCATATAA",5,36.21,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C49Q R179V",2
"lib1","SARS-CoV-2","GGGAATCTGGCAACTT",6,0.71,NA,NA,NA,NA,NA,NA,"stop","S164F V173*",2
"lib1","SARS-CoV-2","GGGAATGGAACCGAAT",6,40.78,6.04,-4.72,0.98,1.5,1.16,0.02,">1 nonsynonymous","Y21K I88Y P96L W106Q S147A",5
"lib1","SARS-CoV-2","GGGAATGGATACAATC",6,125.51,10.72,-0.05,0.06,2.9,1.04,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","GGGAATGTCGTGAAAG",12,59.04,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","GGGAATTAAAACTAAG",2,6.65,7.06,-3.71,0.25,2.2,1.08,0.02,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","GGGAATTACCAGGTTC",2,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70W F134N",2
"lib1","SARS-CoV-2","GGGAATTCCATCATCC",3,8.8,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N64H N92T N107V R124W",4
"lib1","SARS-CoV-2","GGGAATTTCAATATAA",6,5,NA,NA,NA,NA,NA,NA,"stop","G9D N64H L95R R124I P133D P169*",6
"lib1","SARS-CoV-2","GGGAATTTCCAAACAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","T55* D90T Q168L",3
"lib1","SARS-CoV-2","GGGACAAAACTACACC",4,28.27,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","V180G",1
"lib1","SARS-CoV-2","GGGACAAACAAAGCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L V103W S139E Q144S F156E T201L",6
"lib1","SARS-CoV-2","GGGACAAATCCACGGA",6,102.24,6.07,-4.7,1.16,1.5,1.13,0.04,">1 nonsynonymous","A105P Q176S",2
"lib1","SARS-CoV-2","GGGACAACACTTTCTA",2,16.23,6,-4.76,2,1.5,1.16,0.08,">1 nonsynonymous","K87M P96R F99V",3
"lib1","SARS-CoV-2","GGGACAACGGGTTTCC",6,69.66,9.38,-1.39,0.19,1.51,1.13,0.01,">1 nonsynonymous","G51P P149N",2
"lib1","SARS-CoV-2","GGGACAACTTACCAAT",6,98.26,9.99,-0.77,0.07,2.06,1.04,0,">1 nonsynonymous","F12A V153L V173M",3
"lib1","SARS-CoV-2","GGGACAAGAAGTACGA",1,20.8,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D59I Y93T L122V Y178N",4
"lib1","SARS-CoV-2","GGGACAAGGTACTACT",3,54.14,10.61,-0.15,0.09,2.88,1.1,0,">1 nonsynonymous","G9S N120R S129Q",3
"lib1","SARS-CoV-2","GGGACAATCACACCAG",2,34.69,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N40F K56W Y119T G166F",4
"lib1","SARS-CoV-2","GGGACAATTTCCTTCA",2,6.44,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A105H G117D F167V",3
"lib1","SARS-CoV-2","GGGACACAATTTGACA",2,39.67,10.39,-0.38,0.11,2.59,1,0,">1 nonsynonymous","P133M S164P",2
"lib1","SARS-CoV-2","GGGACACCAAGATACG",5,36.72,9.19,-1.58,0.16,1.66,1.12,0.01,">1 nonsynonymous","T3H F8Q T55R",3
"lib1","SARS-CoV-2","GGGACACCAATACACT",6,7.24,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C49R V77M W106S",3
"lib1","SARS-CoV-2","GGGACACGATAGCTTG",2,34.3,10.83,0.07,0.07,2.94,1.04,0,">1 nonsynonymous","T3V Y39V",2
"lib1","SARS-CoV-2","GGGACACGCAAAAAGT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P A81N T170S",3
"lib1","SARS-CoV-2","GGGACACTAACCACTC",9,29.67,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37L I72T D90M D137R E154R K199L",6
"lib1","SARS-CoV-2","GGGACAGACCAATCTA",3,79.87,10.85,0.08,0.08,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGACAGCGGTAAGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15F S69*",2
"lib1","SARS-CoV-2","GGGACAGGTAGTAACA",7,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59P S113R Y119P E135R Q168S",5
"lib1","SARS-CoV-2","GGGACAGTGCCTAAGC",1,31.4,9.88,-0.88,0.16,2.18,1.09,0.01,">1 nonsynonymous","L57N N130F",2
"lib1","SARS-CoV-2","GGGACAGTTAAAAACG",1,13.9,10.21,-0.55,0.12,2.81,1.04,0.01,">1 nonsynonymous","K48E D98L",2
"lib1","SARS-CoV-2","GGGACAGTTGAAGGCG",7,1.22,NA,NA,NA,NA,NA,NA,"stop","L38F P82T I104* C158K",4
"lib1","SARS-CoV-2","GGGACATAATCGTGGA",2,5.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19V L60M N120G E154W L183Y",5
"lib1","SARS-CoV-2","GGGACATCTATTAGAT",6,122.73,9.87,-0.89,0.09,2.58,1.13,0,">1 nonsynonymous","S43C N58C P149R",3
"lib1","SARS-CoV-2","GGGACATTCTAGACGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D D34S S113G Y119C L125Q",5
"lib1","SARS-CoV-2","GGGACCAAGCGGTAAC",1,64.71,10.15,-0.61,0.04,2.81,1,0,">1 nonsynonymous","C61E D75Y N120V",3
"lib1","SARS-CoV-2","GGGACCACCCAAAAAC",3,13.31,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G86A G116C G174R",3
"lib1","SARS-CoV-2","GGGACCATCTAGTAGA",7,134.28,10.53,-0.23,0.04,2.91,1.01,0,">1 nonsynonymous","L5H S184R",2
"lib1","SARS-CoV-2","GGGACCCAAAACAGAG",1,16.82,9.45,-1.31,0.14,2.76,1.06,0.01,">1 nonsynonymous","T3G A145L T201R",3
"lib1","SARS-CoV-2","GGGACCCAAAACATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14F K56* I88S A105L T170R",5
"lib1","SARS-CoV-2","GGGACCCAAGCTATAA",7,93.74,8.4,-2.37,0.11,2.03,1.07,0.01,">1 nonsynonymous","W106M Y119S F160V",3
"lib1","SARS-CoV-2","GGGACCCACAAGAATA",1,42.59,10.18,-0.58,0.1,2.59,1,0,"1 nonsynonymous","T100G",1
"lib1","SARS-CoV-2","GGGACCCACTTCCCCA",6,59.07,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G9W D68P K128I R136M",4
"lib1","SARS-CoV-2","GGGACCCGTGTTACGT",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N13Y V37T C49Y",4
"lib1","SARS-CoV-2","GGGACCCTATTATAAG",8,67.59,6.93,-3.83,0.51,1.5,1.13,0.05,">1 nonsynonymous","D59I Y91L W106F Q144S",4
"lib1","SARS-CoV-2","GGGACCGCCACAAACA",5,61.05,6,-4.76,1.44,1.5,1.17,0.01,">1 nonsynonymous","F8T I80H Y93R",3
"lib1","SARS-CoV-2","GGGACCGCCGTTACTA",1,42.84,6,-4.76,1.77,1.5,1.13,0.01,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","GGGACCTAAACTATTA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y N64L A105E S113P",4
"lib1","SARS-CoV-2","GGGACCTAAAGGAACA",3,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Q Y178I",2
"lib1","SARS-CoV-2","GGGACCTACGTAGGTG",3,31.68,10.72,-0.04,0.08,2.88,1.03,0,"1 nonsynonymous","D90E",1
"lib1","SARS-CoV-2","GGGACCTATCGAACAT",2,18.54,8.44,-2.33,0.34,1.5,1.12,0.04,">1 nonsynonymous","V52D L57R E141L",3
"lib1","SARS-CoV-2","GGGACCTCTACAACTG",6,54.84,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y35Q K48L V103S D112K",4
"lib1","SARS-CoV-2","GGGACCTTCAAACACG",4,44.66,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I72S N107R Y165P",3
"lib1","SARS-CoV-2","GGGACCTTCTAGACCC",1,0.21,NA,NA,NA,NA,NA,NA,"stop","D97* V103T S113R",3
"lib1","SARS-CoV-2","GGGACGATATTTCTCC",1,19.89,6.34,-4.42,0.82,1.5,1.14,0.03,">1 nonsynonymous","I28G G146M K199T",3
"lib1","SARS-CoV-2","GGGACGCACAAAAATT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","Y35* S139R C150K",3
"lib1","SARS-CoV-2","GGGACGCGTTGTAATA",3,24.4,10.47,-0.3,0.08,2.8,1.08,0,">1 nonsynonymous","L5E T15A S53P",3
"lib1","SARS-CoV-2","GGGACGCTGACACCAA",8,84,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W23G V32E L60P",3
"lib1","SARS-CoV-2","GGGACGGCACGCCATC",11,115.16,10.59,-0.17,0.04,2.91,1.03,0,">1 nonsynonymous","K56M D75E S129T",3
"lib1","SARS-CoV-2","GGGACGGGCTCCATCG",1,29.71,10.71,-0.06,0.15,2.63,1,0.01,">1 nonsynonymous","T55S G174S",2
"lib1","SARS-CoV-2","GGGACGTCATCCTCTA",2,71.25,10.17,-0.6,0.08,2.48,1,0,">1 nonsynonymous","L5R P96H",2
"lib1","SARS-CoV-2","GGGACGTGCCATCATC",6,49.21,6,-4.76,1.11,1.5,1.19,0.01,">1 nonsynonymous","T55S F99E Q144R",3
"lib1","SARS-CoV-2","GGGACGTGGGTACATT",4,21.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y F47W Q163P",3
"lib1","SARS-CoV-2","GGGACTAAAAACGATT",4,69.16,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C49A N120I",2
"lib1","SARS-CoV-2","GGGACTAAACAAAACC",7,62.08,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A14S R27A S53L W106K P161N",5
"lib1","SARS-CoV-2","GGGACTAAAGATGACG",2,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L S53K A105E G117D F156D",5
"lib1","SARS-CoV-2","GGGACTAAGGCAGTAC",5,31.32,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V52Q D137P",2
"lib1","SARS-CoV-2","GGGACTACCCGAATTT",3,29.49,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C49G Y93F K198V",3
"lib1","SARS-CoV-2","GGGACTAGGTGCGATC",3,12.67,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A18Q P96E V103P",3
"lib1","SARS-CoV-2","GGGACTAGTCGTTACT",3,20.12,8.51,-2.26,0.25,1.5,1.04,0.03,">1 nonsynonymous","G51L Q84W",2
"lib1","SARS-CoV-2","GGGACTATAATAAGTT",6,54.65,7.66,-3.11,0.3,1.5,1.13,0.04,">1 nonsynonymous","Y39L A89V Y121P S200P",4
"lib1","SARS-CoV-2","GGGACTGAGCTATAGC",2,36.62,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4W C49V K94N",3
"lib1","SARS-CoV-2","GGGACTGATAACTGGG",1,30.51,7.64,-3.13,0.29,1.5,1.14,0.03,">1 nonsynonymous","C6L Y35T N118G",3
"lib1","SARS-CoV-2","GGGACTGCGATTACGC",1,32.87,10.19,-0.57,0.08,2.96,1.01,0,"1 nonsynonymous","N107C",1
"lib1","SARS-CoV-2","GGGACTGGCCCCAACG",7,1,NA,NA,NA,NA,NA,NA,"stop","S19P C49M L60* T85E R127L",5
"lib1","SARS-CoV-2","GGGACTGTTGAATGTA",1,46.79,10.59,-0.17,0.07,2.95,1.03,0,"1 nonsynonymous","G196R",1
"lib1","SARS-CoV-2","GGGACTTACACCCGAC",4,73.31,10.3,-0.46,0.04,2.95,1,0,">1 nonsynonymous","E10S S43N G196A",3
"lib1","SARS-CoV-2","GGGACTTGACGTCACG",1,52.89,10.17,-0.59,0.08,2.85,1.03,0,">1 nonsynonymous","Y39K T140F P149M",3
"lib1","SARS-CoV-2","GGGACTTTTGTGGAAC",2,1.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55R",1
"lib1","SARS-CoV-2","GGGAGAACAAATAATG",2,57.41,10.65,-0.12,0.08,2.94,1,0,"1 nonsynonymous","V180I",1
"lib1","SARS-CoV-2","GGGAGAACTGCTCCAA",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V F12L Y35N S43N N107G T201M",6
"lib1","SARS-CoV-2","GGGAGACATTCGTAAA",2,32.8,10.51,-0.25,0.07,2.93,1.01,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","GGGAGACCCAACGACT",6,36.21,9.17,-1.59,0.25,1.5,1.07,0.03,">1 nonsynonymous","T15V S45P F62Y D97V V115S L122V",6
"lib1","SARS-CoV-2","GGGAGACCCGAGTCTA",2,5.8,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","F12A Y119H N120Y R179M",4
"lib1","SARS-CoV-2","GGGAGACGTCCAACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F N151D",2
"lib1","SARS-CoV-2","GGGAGACGTTGCGCCT",13,207.07,10.19,-0.58,0.05,2.83,1.01,0,">1 nonsynonymous","A81S G116E P149N",3
"lib1","SARS-CoV-2","GGGAGACTTACTAAAA",4,61.42,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N1Q K56L D90V E141N N157I V173I",6
"lib1","SARS-CoV-2","GGGAGAGCACATCTTA",12,3.2,NA,NA,NA,NA,NA,NA,"stop","G101A W106S K114*",3
"lib1","SARS-CoV-2","GGGAGAGGATACAAAA",4,30.82,6.36,-4.4,0.65,1.5,1.19,0.03,">1 nonsynonymous","F70P G116L G196K",3
"lib1","SARS-CoV-2","GGGAGAGGATATAAAT",6,67.85,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F99S S129I G152P",3
"lib1","SARS-CoV-2","GGGAGAGTAATAAGAA",1,7.81,10.2,-0.56,0.13,3,1.03,0.01,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","GGGAGATATAAGAACT",3,59.51,9.75,-1.01,0.12,2.39,1.03,0.01,">1 nonsynonymous","P7S R27L S41A G116V N151L",5
"lib1","SARS-CoV-2","GGGAGATCAATTCAAG",1,29.52,9.21,-1.56,0.08,2.83,1.14,0,">1 nonsynonymous","L5S G166I",2
"lib1","SARS-CoV-2","GGGAGATGCAACCAAA",9,7.14,NA,NA,NA,NA,NA,NA,"stop","V37R G86* R127T",3
"lib1","SARS-CoV-2","GGGAGATTGAATGTTA",3,17.74,10.8,0.03,0.08,2.96,1.05,0,"1 nonsynonymous","Q84T",1
"lib1","SARS-CoV-2","GGGAGCATTATAACAT",7,58.48,8.74,-2.02,0.19,1.6,1.16,0.02,">1 nonsynonymous","P7R K56R R127Q V153H",4
"lib1","SARS-CoV-2","GGGAGCATTTTCTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A190S K198*",2
"lib1","SARS-CoV-2","GGGAGCGTTGGACGAA",4,81.59,10.73,-0.03,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGAGCTAGCAACGCG",3,100.06,8.06,-2.7,0.22,1.87,1.19,0.02,">1 nonsynonymous","Y119L Q144L",2
"lib1","SARS-CoV-2","GGGAGCTGCGAATCAC",1,17.3,6,-4.76,2,1.5,1.1,0.08,">1 nonsynonymous","E10G R16F N64M Y143A G152H",5
"lib1","SARS-CoV-2","GGGAGGAGCAATATAG",10,142.3,10.76,0,0.06,2.95,1.04,0,"1 nonsynonymous","A22E",1
"lib1","SARS-CoV-2","GGGAGGATAACAATAT",5,133.08,10.39,-0.37,0.05,2.91,1.03,0,"1 nonsynonymous","G174K",1
"lib1","SARS-CoV-2","GGGAGGCGGGTAATTC",3,61.68,9.61,-1.15,0.06,2.86,1.11,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","GGGAGGTGTTTTACCA",5,25.59,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","L60D C158I",2
"lib1","SARS-CoV-2","GGGAGTACCAGCCTAA",6,7.09,NA,NA,NA,NA,NA,NA,"stop","N107H G146M Y165*",3
"lib1","SARS-CoV-2","GGGAGTCACAATCTTC",8,72.66,8.53,-2.23,0.19,1.52,1.13,0.01,">1 nonsynonymous","G83I G155F",2
"lib1","SARS-CoV-2","GGGAGTCATACAAAAA",2,24.7,10.73,-0.03,0.09,2.85,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGGAGTCGAATACCGG",2,39.74,8.12,-2.65,0.18,2.59,1.03,0.01,">1 nonsynonymous","S113L K132S L187N",3
"lib1","SARS-CoV-2","GGGAGTCTACGAATCA",5,37.63,9.7,-1.06,0.14,2.68,1.05,0.01,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","GGGAGTGAAACAGCGC",8,156.23,10.47,-0.29,0.06,2.94,1.03,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","GGGAGTGCAGGGCCAA",5,27.46,6.04,-4.72,1.32,1.5,1.2,0.03,">1 nonsynonymous","A89L Y121Q",2
"lib1","SARS-CoV-2","GGGAGTGCCCAGCCCA",3,41.77,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W106M R124N F185V",3
"lib1","SARS-CoV-2","GGGAGTGCTTGGCATT",2,0,NA,NA,NA,NA,NA,NA,"stop","D90R N107* V173K",3
"lib1","SARS-CoV-2","GGGAGTTTGTAACCCA",4,23.61,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","V77P G83F T100R F167W",4
"lib1","SARS-CoV-2","GGGATAAAATTAACAA",1,29.77,10.59,-0.18,0.05,2.87,1.1,0,"1 nonsynonymous","D59W",1
"lib1","SARS-CoV-2","GGGATAATACGATTCG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","Q84* P96Q",2
"lib1","SARS-CoV-2","GGGATACAAAGTCGAA",5,19.71,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E76L P82K V182P",3
"lib1","SARS-CoV-2","GGGATACAACCGCGAA",1,25.11,7.1,-3.66,0.37,1.5,1.12,0.03,">1 nonsynonymous","L5V D68W N130I E141A Q168F",5
"lib1","SARS-CoV-2","GGGATACACGATTGCG",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W V103G A190N",3
"lib1","SARS-CoV-2","GGGATACCAACACAAA",5,42.78,10.72,-0.05,0.06,2.91,1.04,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","GGGATACCATGGCAAA",6,24.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V S69F G86L V115P",4
"lib1","SARS-CoV-2","GGGATACCTACAGCAG",2,16.31,9.53,-1.23,0.09,2.74,1.13,0,">1 nonsynonymous","S43D F62Q T100Q F156L",4
"lib1","SARS-CoV-2","GGGATACTCCTATATT",1,32.96,9.32,-1.45,0.09,2.6,1.05,0,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","GGGATAGAAGTAGGCA",7,107.17,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V77Q Y143N Y178V",3
"lib1","SARS-CoV-2","GGGATAGATACCCTGC",9,32.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3R F99S Y119T R127A T148L G196W",6
"lib1","SARS-CoV-2","GGGATAGCGACACACT",4,31.78,10.13,-0.63,0.13,2.24,1,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GGGATAGCTCGCCGAT",4,133.95,9.6,-1.16,0.04,2.9,1.04,0,">1 nonsynonymous","K56M T170N",2
"lib1","SARS-CoV-2","GGGATATAAGTTTCAA",2,27.96,10.76,-0.01,0.06,2.87,1.06,0,"1 nonsynonymous","I2M",1
"lib1","SARS-CoV-2","GGGATCACTCGAATTA",1,3.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","GGGATCATCCCTGGAT",4,2.99,NA,NA,NA,NA,NA,NA,"stop","V52L I88* G174T S200L",4
"lib1","SARS-CoV-2","GGGATCCCAGTCGTCC",1,32.58,10.59,-0.18,0.09,2.85,1.09,0,"1 nonsynonymous","G116R",1
"lib1","SARS-CoV-2","GGGATGAACAAAGACA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","T63S A81H N92H S113C I138*",5
"lib1","SARS-CoV-2","GGGATGACGGATCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44T L122*",2
"lib1","SARS-CoV-2","GGGATGCGCTTTACAA",1,5.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L125H",1
"lib1","SARS-CoV-2","GGGATGCGGCTATTTT",4,72.26,10.64,-0.12,0.04,2.93,1.03,0,">1 nonsynonymous","N1A A33C C61Y",3
"lib1","SARS-CoV-2","GGGATGCTAAACCAAA",2,4.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","GGGATGCTGGTAATGT",2,60.75,9.75,-1.02,0.1,1.92,1.07,0,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","GGGATGGACAGGTACT",1,3.39,NA,NA,NA,NA,NA,NA,"stop","P7D V37R T148S V173*",4
"lib1","SARS-CoV-2","GGGATGGTGAAAAAAA",8,92.69,6,-4.76,1.59,1.5,1.11,0,">1 nonsynonymous","F12L L60D P149V N157F",4
"lib1","SARS-CoV-2","GGGATTAAAAAATCTA",2,27.25,6,-4.76,2,3,1.1,0,"1 nonsynonymous","E135P",1
"lib1","SARS-CoV-2","GGGATTAACAACCAAA",3,131.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8L N30H Q84V L95A Y143T",5
"lib1","SARS-CoV-2","GGGATTAACAATTGAC",2,32.08,6.61,-4.15,0.82,1.5,1.24,0.07,">1 nonsynonymous","D59M I104H F126E",3
"lib1","SARS-CoV-2","GGGATTAATGGCAGGT",1,6.93,9.04,-1.73,0.29,2.49,1.09,0.04,">1 nonsynonymous","T15G R78L S108A",3
"lib1","SARS-CoV-2","GGGATTACATGTTAAC",2,35.96,8.48,-2.29,0.12,2,1.13,0.01,">1 nonsynonymous","R73L A81S",2
"lib1","SARS-CoV-2","GGGATTACCAAAAATT",5,23.65,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y39D E141N C150I F156L",4
"lib1","SARS-CoV-2","GGGATTATGGGTACAT",3,8.56,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","A42C D68K I72S S113Y S200N",5
"lib1","SARS-CoV-2","GGGATTCAACCAGGTA",4,27.28,10.72,-0.04,0.1,2.91,1.05,0,">1 nonsynonymous","T63N V173Y",2
"lib1","SARS-CoV-2","GGGATTCACTGTGCAA",1,45.08,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I72S G86T T100Y Y119T S139F C150M G155T",7
"lib1","SARS-CoV-2","GGGATTGACAACATAA",6,43.82,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9A Y93S D137E",3
"lib1","SARS-CoV-2","GGGATTGATGTTGCCA",6,1.51,NA,NA,NA,NA,NA,NA,"stop","C6K L57* I104Y D112* V182H",5
"lib1","SARS-CoV-2","GGGATTGCTTCATCTA",3,24.87,10.87,0.1,0.07,2.93,1.06,0,">1 nonsynonymous","V37S T201S",2
"lib1","SARS-CoV-2","GGGATTGGACTTTCTC",5,104.44,10.19,-0.58,0.05,2.89,1.02,0,">1 nonsynonymous","T46M K87Q D97L T100F T140Q",5
"lib1","SARS-CoV-2","GGGATTTAACCTAATC",2,54.11,10.59,-0.17,0.05,2.96,1,0,"1 nonsynonymous","P96A",1
"lib1","SARS-CoV-2","GGGATTTAAGCAAGTA",7,30.19,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N1S K94F R127P L188Q",4
"lib1","SARS-CoV-2","GGGATTTAAGTCTGAT",4,54.11,9.17,-1.6,0.18,1.5,1.16,0.02,">1 nonsynonymous","L57A Y121P",2
"lib1","SARS-CoV-2","GGGATTTACAAATCAT",14,90.57,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I2L S19V T63W T148C",4
"lib1","SARS-CoV-2","GGGATTTAGGCCCAAG",1,20.62,10.52,-0.24,0.07,2.92,1.04,0,">1 nonsynonymous","L5V N24Y A33W",3
"lib1","SARS-CoV-2","GGGATTTGAAGAACTA",8,192.18,9.92,-0.84,0.1,1.98,1.08,0,">1 nonsynonymous","I2S L38R",2
"lib1","SARS-CoV-2","GGGATTTGACTCCACT",3,64.4,10.6,-0.17,0.05,2.9,1,0,">1 nonsynonymous","K48Y L122E",2
"lib1","SARS-CoV-2","GGGATTTTAAGCACTT",3,67.08,10.7,-0.06,0.05,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCAAAAACCATATT",7,23.88,7.21,-3.55,0.36,1.5,1.08,0.03,">1 nonsynonymous","D137L S164F P197V T201R",4
"lib1","SARS-CoV-2","GGGCAAACTAGATGAT",11,67.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1S P7L Y35N N107S F126T F134G T148M T201I",8
"lib1","SARS-CoV-2","GGGCAAATAAGATAAC",5,15.26,10.87,0.11,0.06,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCAAATCCGCTTGT",3,17.24,8.92,-1.85,0.09,2.7,1.14,0,">1 nonsynonymous","F156S G174F",2
"lib1","SARS-CoV-2","GGGCAAATGCTGCCAT",6,39.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10P G86I",2
"lib1","SARS-CoV-2","GGGCAAATTCGAAACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R Y119H",2
"lib1","SARS-CoV-2","GGGCAACAATAACATA",1,26.14,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8K C61S G86F Y91T",4
"lib1","SARS-CoV-2","GGGCAACACTCAATCG",10,50.13,10.6,-0.16,0.06,2.86,1.07,0,">1 nonsynonymous","F44S Y123K",2
"lib1","SARS-CoV-2","GGGCAACCCTTTTTAA",6,112.47,10.69,-0.08,0.03,2.97,1.01,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","GGGCAACCGGCACTAC",5,20.37,6.07,-4.7,0.9,1.5,1.21,0.02,">1 nonsynonymous","I80H D97F G166V",3
"lib1","SARS-CoV-2","GGGCAACTAAACCGAG",2,17.13,10.7,-0.06,0.08,2.85,1.01,0,">1 nonsynonymous","N64L E141K",2
"lib1","SARS-CoV-2","GGGCAACTATTCTTAC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","A22E K199*",2
"lib1","SARS-CoV-2","GGGCAAGTTCATGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* D112F F134S E141S",4
"lib1","SARS-CoV-2","GGGCAATGCAGCAAGA",4,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A33C V103L G174I",4
"lib1","SARS-CoV-2","GGGCAATTTAACATGA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","D68E G83*",2
"lib1","SARS-CoV-2","GGGCACAAACCATGTA",2,1.26,NA,NA,NA,NA,NA,NA,"stop","G146T N157H Y165*",3
"lib1","SARS-CoV-2","GGGCACAAATTTTATC",1,12.87,9.9,-0.87,0.19,1.99,1.05,0.02,"1 nonsynonymous","K94L",1
"lib1","SARS-CoV-2","GGGCACACAAGGGAAC",3,78.26,10.42,-0.34,0.06,2.86,1.01,0,">1 nonsynonymous","S29C L60V",2
"lib1","SARS-CoV-2","GGGCACACTAAAGAGA",5,37.56,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S69N V77K P149Y",3
"lib1","SARS-CoV-2","GGGCACAGAGAATTGT",2,14.91,10.18,-0.59,0.1,2.84,1.05,0.01,"1 nonsynonymous","D34A",1
"lib1","SARS-CoV-2","GGGCACCAACGTCTTT",3,55.72,10.74,-0.03,0.04,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCACGAAAACATAA",2,16.91,10.74,-0.02,0.08,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCACGAAACTGTAA",2,14.1,6.8,-3.96,0.81,1.5,1,0.04,">1 nonsynonymous","D90P K114M",2
"lib1","SARS-CoV-2","GGGCACGATCAAAATG",1,40.24,10.83,0.07,0.09,2.98,1,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","GGGCACGTCTACCCAA",6,47.93,8.42,-2.35,0.16,1.5,1.16,0.01,">1 nonsynonymous","I28K E154L",2
"lib1","SARS-CoV-2","GGGCACGTTGGAAATG",3,86.23,8.2,-2.56,0.18,1.5,1.08,0.01,">1 nonsynonymous","Y39F P177G K198L",3
"lib1","SARS-CoV-2","GGGCACTAGCATGTTA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","N4D R16* L60S Y121S L131G",5
"lib1","SARS-CoV-2","GGGCACTGAGACCTTT",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P S29M T55K R136M",4
"lib1","SARS-CoV-2","GGGCACTTTGATATTA",7,47.2,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S36T P133S E141T C150H",4
"lib1","SARS-CoV-2","GGGCAGAAAATCACAA",3,16.87,8.34,-2.42,0.26,1.5,1,0.03,">1 nonsynonymous","D68F N151Q",2
"lib1","SARS-CoV-2","GGGCAGAAACTAACAA",4,112.35,10.47,-0.3,0.05,2.84,1.09,0,">1 nonsynonymous","Y39W Y121L",2
"lib1","SARS-CoV-2","GGGCAGAAGAATCACG",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W F44L C61F G86R D90P G172T",6
"lib1","SARS-CoV-2","GGGCAGACAGTACAGG",2,47.79,10.83,0.07,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCAGACCAAAGTAT",3,15.5,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S36Q P149L V180E",3
"lib1","SARS-CoV-2","GGGCAGAGGTGATGCA",1,21.4,10.78,0.01,0.08,2.91,1.01,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","GGGCAGAGTTAACTTA",2,9.54,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R27L V103S E141S C150H Y175E",5
"lib1","SARS-CoV-2","GGGCAGCCGAACGATA",5,104.22,7.82,-2.94,0.11,1.62,1.14,0,">1 nonsynonymous","T55Y Q84L A145Y Y175H",4
"lib1","SARS-CoV-2","GGGCAGCCGTTGTGAC",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135S L162W L183R",3
"lib1","SARS-CoV-2","GGGCAGGATAAAGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E Y121R F134S P149C P161Y",5
"lib1","SARS-CoV-2","GGGCAGTTACCCTTTA",4,37.67,10.78,0.02,0.06,2.92,1.03,0,"1 nonsynonymous","K56E",1
"lib1","SARS-CoV-2","GGGCAGTTCCAAGGTT",3,30.65,6.77,-3.99,0.33,1.5,1.11,0.02,">1 nonsynonymous","A14Y N92S L122T",3
"lib1","SARS-CoV-2","GGGCAGTTTACTAATA",6,10.9,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15Y F47E",2
"lib1","SARS-CoV-2","GGGCATAAGGTTCAAC",4,14.86,6,-4.76,0.38,3,1.08,0,">1 nonsynonymous","D97S W106E V180F",3
"lib1","SARS-CoV-2","GGGCATAGACTACAAA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","Q84W T100D L122*",3
"lib1","SARS-CoV-2","GGGCATAGGCAACCAC",9,175.42,10.67,-0.1,0.04,2.91,1.05,0,">1 nonsynonymous","T15Y P197L",2
"lib1","SARS-CoV-2","GGGCATCAACACTAGC",1,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y F160G H189C",3
"lib1","SARS-CoV-2","GGGCATCAACATTAAC",4,21.76,6,-4.76,1.82,1.5,1.13,0.02,">1 nonsynonymous","E10A S36N F47L Y91R L125I Q144G",6
"lib1","SARS-CoV-2","GGGCATCAATACAATT",4,1.88,NA,NA,NA,NA,NA,NA,"stop","E10* S19T L38A D98*",4
"lib1","SARS-CoV-2","GGGCATCAGATTGTCC",6,72.79,8.72,-2.05,0.21,1.67,1.15,0.02,">1 nonsynonymous","F8G W106V F134Y",3
"lib1","SARS-CoV-2","GGGCATCATGAGGCAA",2,0.34,NA,NA,NA,NA,NA,NA,"stop","D34* G51N R78C R136E",4
"lib1","SARS-CoV-2","GGGCATCCCTCTGAAT",2,20.22,10.68,-0.08,0.06,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCATCCTATCGCCG",6,84.1,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35G N107S P133L N171S",4
"lib1","SARS-CoV-2","GGGCATCGAAAGTACA",8,39.7,8.84,-1.92,0.29,1.5,1,0.03,">1 nonsynonymous","T85W Y91N N151I",3
"lib1","SARS-CoV-2","GGGCATTAACACGTAC",3,67.87,10.62,-0.15,0.06,2.91,1.04,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","GGGCATTACATTATAA",4,26.16,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","C6R C150G",2
"lib1","SARS-CoV-2","GGGCATTCAGATTCAA",1,82.7,8.54,-2.22,0.12,2.04,1.11,0.01,">1 nonsynonymous","A105N G174E",2
"lib1","SARS-CoV-2","GGGCATTTAAAACATA",3,35.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P96S C102Y P133R",3
"lib1","SARS-CoV-2","GGGCATTTCAAAGTAA",2,5.96,6.08,-4.68,1.67,1.5,1.29,0.03,">1 nonsynonymous","D34F N118L",2
"lib1","SARS-CoV-2","GGGCCAAAGAGCAACT",7,93.31,9.22,-1.54,0.07,2.86,1.09,0,"1 nonsynonymous","G166W",1
"lib1","SARS-CoV-2","GGGCCAAAGGGAATAA",1,36.72,9.84,-0.92,0.13,2.04,1.01,0.01,">1 nonsynonymous","E10F A33E",2
"lib1","SARS-CoV-2","GGGCCAACAAGTACAA",2,20.51,7.78,-2.99,0.25,1.55,1.08,0.02,">1 nonsynonymous","Y123V I142P P169L Y178F",4
"lib1","SARS-CoV-2","GGGCCAACAATATAAT",3,62.37,8.77,-2,0.08,2.99,1.03,0,">1 nonsynonymous","D59E F126A",2
"lib1","SARS-CoV-2","GGGCCAACAGACTTAG",3,7.94,10.54,-0.22,0.08,2.95,1,0,">1 nonsynonymous","F62S K114S",2
"lib1","SARS-CoV-2","GGGCCAAGAGCATGCG",6,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V Q79R G146C P197D",4
"lib1","SARS-CoV-2","GGGCCAAGGAATACTT",4,37.72,6.36,-4.41,0.56,1.5,1.16,0.02,">1 nonsynonymous","F44L C61I Y165T",3
"lib1","SARS-CoV-2","GGGCCAAGGTAAACGC",3,1.99,NA,NA,NA,NA,NA,NA,"stop","A14* S41* T55G D90* F99H Y119L T201V",7
"lib1","SARS-CoV-2","GGGCCACATTAAATAA",1,0.79,NA,NA,NA,NA,NA,NA,"stop","C6T N58R N110L L122P Y175*",5
"lib1","SARS-CoV-2","GGGCCACCAGTGTTCA",3,12.1,6,-4.76,2,1.5,1.37,0.07,">1 nonsynonymous","C49V T63N P82A K128D",4
"lib1","SARS-CoV-2","GGGCCACGACTCGATA",5,57.61,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V77E S113N",2
"lib1","SARS-CoV-2","GGGCCACGGATCCGAC",4,67.12,9.84,-0.93,0.12,2.49,1.03,0.01,">1 nonsynonymous","L57V E141L",2
"lib1","SARS-CoV-2","GGGCCACGGTCAGATG",3,106.03,9.93,-0.84,0.07,2.3,1.03,0,">1 nonsynonymous","K56S N64V G83E G152F",4
"lib1","SARS-CoV-2","GGGCCACTACCTCAAG",3,1.27,NA,NA,NA,NA,NA,NA,"stop","V32A S129* E141F",3
"lib1","SARS-CoV-2","GGGCCAGATAAGGCCA",5,72.63,10.11,-0.65,0.06,2.69,1.01,0,">1 nonsynonymous","N13L G196R",2
"lib1","SARS-CoV-2","GGGCCAGCTAAAAGTG",4,5.7,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","D34I F99R Q144R",3
"lib1","SARS-CoV-2","GGGCCAGGTCCATCAT",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L G101K F134R",3
"lib1","SARS-CoV-2","GGGCCATATCGCATGA",1,24.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I72P C150H",2
"lib1","SARS-CoV-2","GGGCCATTATCACAAC",9,69.67,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9L L95S T100L",3
"lib1","SARS-CoV-2","GGGCCCAAACTCTAAT",3,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55C E76T D90I",3
"lib1","SARS-CoV-2","GGGCCCAAATATTATA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","V11* S19K",2
"lib1","SARS-CoV-2","GGGCCCGAAATACTTA",5,57.25,8.67,-2.09,0.13,2.51,1.14,0,">1 nonsynonymous","S45R G117T",2
"lib1","SARS-CoV-2","GGGCCCTCTGGCATAG",5,6.56,NA,NA,NA,NA,NA,NA,"stop","P54* Y93N",2
"lib1","SARS-CoV-2","GGGCCCTGAGCTGGGA",4,21.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y21K C49N C150Y F185L",4
"lib1","SARS-CoV-2","GGGCCGATCCAGTCGC",6,40.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D75L Y93V V103N K128F",4
"lib1","SARS-CoV-2","GGGCCGTGACCCACCC",3,1.14,NA,NA,NA,NA,NA,NA,"stop","T55S T63Q R78Y Y143* C150H",5
"lib1","SARS-CoV-2","GGGCCTAAAGACGCCA",1,11.18,10.77,0.01,0.09,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGCCTAACAATTTAT",3,11.46,6.39,-4.37,0.91,1.5,1.06,0.01,">1 nonsynonymous","I2N Y50F G74D I104E Q144S Q168P",6
"lib1","SARS-CoV-2","GGGCCTACACTCGTGC",6,157.32,10.71,-0.05,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCCTATACTACACG",5,62.63,6.01,-4.76,0.97,1.5,1.23,0.02,">1 nonsynonymous","L95A Y165L",2
"lib1","SARS-CoV-2","GGGCCTCCTTAGAGAG",2,34.68,6.06,-4.71,1.26,1.5,1.16,0.05,">1 nonsynonymous","S69G F99S K128Y F156L",4
"lib1","SARS-CoV-2","GGGCCTCGTTAAGAGG",6,146.92,10.8,0.04,0.07,2.91,1.05,0,"1 nonsynonymous","S36N",1
"lib1","SARS-CoV-2","GGGCCTGGTTAGCTGC",9,52.09,6.25,-4.52,0.92,1.5,1.21,0.03,">1 nonsynonymous","P7D W23I V103K Q144D T201M",5
"lib1","SARS-CoV-2","GGGCCTGTCTTATCGA",3,11.09,6,-4.76,2,1.5,1.08,0.01,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","GGGCCTTGGTTAAAAA",2,34.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N64R I80K N107S",3
"lib1","SARS-CoV-2","GGGCCTTGTTTCTTGT",6,81.22,9.63,-1.14,0.38,1.5,1,0.07,">1 nonsynonymous","F8I K114M Y175K K199T",4
"lib1","SARS-CoV-2","GGGCGAAAAAGACTAT",2,7.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R16A N40M V103H E141C",4
"lib1","SARS-CoV-2","GGGCGAAAGAAACGAG",2,76.01,9.97,-0.79,0.08,2.69,1.03,0,">1 nonsynonymous","N4M L60I G152P P197Y",4
"lib1","SARS-CoV-2","GGGCGAAATCGGCTGT",7,57.54,9.39,-1.38,0.09,1.64,1.11,0,">1 nonsynonymous","E10V W106I C195D",3
"lib1","SARS-CoV-2","GGGCGAAGAGCGACTA",2,50.59,10.82,0.05,0.08,2.97,1.02,0,">1 nonsynonymous","L5K K26V T148V",3
"lib1","SARS-CoV-2","GGGCGAATGCGCACTC",2,15.74,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","D34R W106R P149F",3
"lib1","SARS-CoV-2","GGGCGACATTCATTTC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","T3L R27M N58* T201N",4
"lib1","SARS-CoV-2","GGGCGACCATCTGGCG",1,16.95,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","D59E V77N G83H N157C",4
"lib1","SARS-CoV-2","GGGCGAGATGACAGGT",1,5.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94T P197S",2
"lib1","SARS-CoV-2","GGGCGCATGACAAGCC",2,49.21,8.73,-2.03,0.12,2.54,1.12,0.01,">1 nonsynonymous","N1D P7L R73A",3
"lib1","SARS-CoV-2","GGGCGCATTTACCCAA",4,81.97,10.53,-0.23,0.04,2.92,1.02,0,"1 nonsynonymous","D59V",1
"lib1","SARS-CoV-2","GGGCGCGGAACCGCGA",6,99.51,9.23,-1.53,0.11,2.16,1.11,0,">1 nonsynonymous","K26M Y121I K128S A145S V173R",5
"lib1","SARS-CoV-2","GGGCGCTCCAATGCTA",3,0.56,NA,NA,NA,NA,NA,NA,"stop","S41T T85* E154L",3
"lib1","SARS-CoV-2","GGGCGCTTTAGCCTTC",6,133.94,10.81,0.04,0.06,2.94,1.03,0,">1 nonsynonymous","A192S G196E",2
"lib1","SARS-CoV-2","GGGCGGAAAAGAAACT",1,1.26,NA,NA,NA,NA,NA,NA,"stop","D90V W106N D112T R127*",4
"lib1","SARS-CoV-2","GGGCGGAAAGTCGGAC",1,7.94,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K94H F99E A192R",3
"lib1","SARS-CoV-2","GGGCGGACTTTATATG",5,162.01,8.24,-2.52,0.16,2.09,1.08,0.01,">1 nonsynonymous","A14Y K87F Y119D",3
"lib1","SARS-CoV-2","GGGCGGAGTCGATACA",6,55.99,10.75,-0.02,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCGGCCGAAATCGT",4,0,NA,NA,NA,NA,NA,NA,"stop","F99* Y178I P197L",3
"lib1","SARS-CoV-2","GGGCGGCTACCATCCA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","L5H R25* V32L V37K L57K F99H A105F D112V R136F",9
"lib1","SARS-CoV-2","GGGCGGGCAAACCAGC",4,11.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14I A42Q L95Y F99S I104S G117L I138Y",7
"lib1","SARS-CoV-2","GGGCGTACGAAAACAA",2,216.95,9.33,-1.43,0.06,2.89,1.08,0,"1 nonsynonymous","G166Q",1
"lib1","SARS-CoV-2","GGGCGTACGACAACCA",3,37.61,10.85,0.09,0.09,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCGTATTTTCTATT",5,32.87,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","L95P N120R T201V",3
"lib1","SARS-CoV-2","GGGCGTTACTGCAATA",1,10.39,6,-4.76,2,3,1.06,0,">1 nonsynonymous","V71K I138E",2
"lib1","SARS-CoV-2","GGGCTAACAAACAAAA",7,40.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L57N A89I P149Q F167Q",4
"lib1","SARS-CoV-2","GGGCTAAGCTGCGAAT",3,177.45,7.62,-3.14,0.17,1.56,1.13,0.01,">1 nonsynonymous","K87N F134M N157R",3
"lib1","SARS-CoV-2","GGGCTAATTATCGTAA",3,42.49,10.69,-0.08,0.08,2.93,1,0,">1 nonsynonymous","N130H P197L",2
"lib1","SARS-CoV-2","GGGCTAATTTGCCCGC",8,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77F T140F P177M E186F",4
"lib1","SARS-CoV-2","GGGCTAGATTGTTGGT",3,51.98,9.9,-0.86,0.15,2.29,1.08,0.01,">1 nonsynonymous","F62W D90G Y123A",3
"lib1","SARS-CoV-2","GGGCTATAATAAAGAA",10,158.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5I L60W I142G C158K P177S",5
"lib1","SARS-CoV-2","GGGCTATACAAGCGCG",6,159.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Q84C L111K Y119C Y165H",4
"lib1","SARS-CoV-2","GGGCTATCCCATGAAA",4,130.01,9.79,-0.98,0.08,2.76,1.09,0,">1 nonsynonymous","G9E V37S K48S K87Y N120T K199Y",6
"lib1","SARS-CoV-2","GGGCTATCCGGATTCT",1,31,10.33,-0.43,0.08,2.86,1.06,0,">1 nonsynonymous","F12I C61S D97M",3
"lib1","SARS-CoV-2","GGGCTATGATAGGATT",2,1.6,NA,NA,NA,NA,NA,NA,"stop","D98* G166E K198*",3
"lib1","SARS-CoV-2","GGGCTATTGCCGCTAT",1,83.07,9.72,-1.04,0.03,2.95,1.04,0,"1 nonsynonymous","G166V",1
"lib1","SARS-CoV-2","GGGCTATTGTATATTA",3,41.12,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","F44S P133A R179E",3
"lib1","SARS-CoV-2","GGGCTCATCCATAGGA",3,25.48,10.89,0.13,0.11,2.92,1.04,0,"1 nonsynonymous","I2E",1
"lib1","SARS-CoV-2","GGGCTCATGTGCGATA",5,0.06,NA,NA,NA,NA,NA,NA,"stop","L5* D59G G155Y C158F",4
"lib1","SARS-CoV-2","GGGCTCCAAAATTTGT",3,14.26,10.24,-0.52,0.18,2.53,1,0.02,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","GGGCTCCATGTATACC",2,2.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P197Q",1
"lib1","SARS-CoV-2","GGGCTCCTCGTTAAAA",3,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I I80S G117I",3
"lib1","SARS-CoV-2","GGGCTCGTTTCGGCTG",4,30.14,9.85,-0.91,0.12,2.77,1.11,0.01,">1 nonsynonymous","A42S S164G",2
"lib1","SARS-CoV-2","GGGCTCTAGAAACACG",6,50.88,10.62,-0.15,0.03,2.94,1.03,0,"1 nonsynonymous","V65G",1
"lib1","SARS-CoV-2","GGGCTGAACGAAGTCA",7,66.92,6.52,-4.25,0.59,1.5,1.14,0.03,">1 nonsynonymous","Y39S L95H",2
"lib1","SARS-CoV-2","GGGCTGAGGCTATGTA",2,18.91,8.15,-2.62,0.28,1.5,1.16,0.02,">1 nonsynonymous","Y39R G51C T170Y",3
"lib1","SARS-CoV-2","GGGCTGCACAGTGTAA",2,26.63,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T15L L60S P149R L162T",4
"lib1","SARS-CoV-2","GGGCTGCATGGGTGGT",6,56.43,8.5,-2.27,0.29,1.5,1,0.03,">1 nonsynonymous","E10G S41E G146R N157L Q163M",5
"lib1","SARS-CoV-2","GGGCTGCATTTAAATA",5,35.28,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V52N N64S D98T Y121W",4
"lib1","SARS-CoV-2","GGGCTGCCAAGAACCA",5,19.38,6.01,-4.75,1.21,1.5,1.13,0.02,">1 nonsynonymous","C6L Y91A F99L",3
"lib1","SARS-CoV-2","GGGCTGCCGAAGAATC",2,69.02,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C158D Y175M",2
"lib1","SARS-CoV-2","GGGCTGCGCGCAAGTT",1,23.72,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","R25L L38W T46I S139D Q168F",5
"lib1","SARS-CoV-2","GGGCTGGCCATAGTAA",8,0,NA,NA,NA,NA,NA,NA,"stop","F44L L60K N107* P133K T201K",5
"lib1","SARS-CoV-2","GGGCTGGCGTATCCAC",6,93.36,7.74,-3.03,0.2,1.61,1.19,0.02,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","GGGCTGTATACGCACT",7,41.25,10.11,-0.66,0.11,2.13,1,0.01,">1 nonsynonymous","L5S N13L Y35W L60W D97G",5
"lib1","SARS-CoV-2","GGGCTTACAGAATTCC",2,22.87,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A33P D90T L95S F126L",4
"lib1","SARS-CoV-2","GGGCTTACTTGATAGG",2,47.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62C V77W",2
"lib1","SARS-CoV-2","GGGCTTAGCCAAACGT",4,14.63,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","V11G G51A A190P",3
"lib1","SARS-CoV-2","GGGCTTAGCCTTGAAC",9,199.85,9.99,-0.77,0.07,2.73,1.02,0,">1 nonsynonymous","G9S D90N P161S",3
"lib1","SARS-CoV-2","GGGCTTATGCGCAATA",2,55.4,10.74,-0.02,0.08,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCTTCAGTGTACGA",3,50.79,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14D L60H A89P R127N",4
"lib1","SARS-CoV-2","GGGCTTCCCAACACTG",1,33.15,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A14L D90N D112P Y175S",4
"lib1","SARS-CoV-2","GGGCTTCTCTACGTAA",1,0.73,NA,NA,NA,NA,NA,NA,"stop","N13R L95M G117* Q144S G155A F167G",6
"lib1","SARS-CoV-2","GGGCTTGAAATTTTAC",1,25.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T G101S Y119R S129R",4
"lib1","SARS-CoV-2","GGGCTTTCCTTCGAGC",4,65.57,10.72,-0.05,0.08,2.85,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGCTTTGAGGATAAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","V181*",1
"lib1","SARS-CoV-2","GGGCTTTTATACATCA",2,43.63,10.71,-0.05,0.09,2.91,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGGAAAAATTATTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S T46L S139G Y143C",4
"lib1","SARS-CoV-2","GGGGAAAAGACCACCC",1,13.93,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I2F N107V L183R",3
"lib1","SARS-CoV-2","GGGGAAAAGCCTCCCC",1,25.25,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8A G51E P82V K87I Y121P Y159Q",6
"lib1","SARS-CoV-2","GGGGAAATGAAATGAA",2,115.88,9.99,-0.77,0.12,2.38,1.03,0.01,">1 nonsynonymous","A22R E135R T201D",3
"lib1","SARS-CoV-2","GGGGAACAACTACCCT",3,19.17,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","A42V K56L G74R I88Q D112G S164A",6
"lib1","SARS-CoV-2","GGGGAACCGGGAATGT",3,25.58,8.55,-2.21,0.12,3,1,0.01,">1 nonsynonymous","N157K P191R",2
"lib1","SARS-CoV-2","GGGGAACGAACTTCAT",3,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y I80W S147Y E154T P197L",5
"lib1","SARS-CoV-2","GGGGAACTAACCAAAA",1,17.01,6.4,-4.36,0.76,1.5,1.19,0.04,">1 nonsynonymous","P82M K114G",2
"lib1","SARS-CoV-2","GGGGAACTTAATAATC",4,9.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61F S108M",2
"lib1","SARS-CoV-2","GGGGAAGTGAATACAT",2,15.21,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I2D G74V G101M W106V N151R",5
"lib1","SARS-CoV-2","GGGGAAGTGAGTTACC",5,2.89,NA,NA,NA,NA,NA,NA,"stop","C6Q N30* V37W F70P R127S",5
"lib1","SARS-CoV-2","GGGGAAGTTCTAGCGC",2,38.36,10.56,-0.21,0.1,2.88,1.02,0,">1 nonsynonymous","A42K Y91I",2
"lib1","SARS-CoV-2","GGGGAAGTTGCAACTA",2,63.01,10.17,-0.6,0.06,2.92,1,0,">1 nonsynonymous","S43T N110R Y143L K198L",4
"lib1","SARS-CoV-2","GGGGAATAAACTCGTA",1,23.94,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","GGGGAATAACATACCA",4,41.35,9.57,-1.19,0.12,1.96,1.12,0.01,">1 nonsynonymous","Y35M N92S P149M",3
"lib1","SARS-CoV-2","GGGGAATAAGTGTTAG",4,43.82,9.85,-0.91,0.07,2.27,1.01,0,">1 nonsynonymous","C6V T55P",2
"lib1","SARS-CoV-2","GGGGAATGCGGTTGGA",1,25.63,10.74,-0.02,0.1,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGGAATTGAGATCAA",16,90.09,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","E10W S19E D90L V181G",4
"lib1","SARS-CoV-2","GGGGAATTTTGTCTAT",2,9.41,10.25,-0.52,0.16,2.66,1,0.02,">1 nonsynonymous","A14N S41Y A89C N120K",4
"lib1","SARS-CoV-2","GGGGACAAAGTCCAAA",1,0.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","GGGGACAATCAATAGC",1,12.78,9.9,-0.87,0.08,2.88,1.04,0,">1 nonsynonymous","N4I Y119R",2
"lib1","SARS-CoV-2","GGGGACATAATAAAAG",6,44.54,10.69,-0.08,0.1,2.89,1.06,0,">1 nonsynonymous","L5D S43Y",2
"lib1","SARS-CoV-2","GGGGACATCCGCATAT",3,18.11,9.64,-1.12,0.11,2.06,1.11,0,">1 nonsynonymous","L60K Y91Q",2
"lib1","SARS-CoV-2","GGGGACCTGTGAGCAT",2,22.2,10.37,-0.4,0.06,2.94,1.03,0,">1 nonsynonymous","F126L I138Q",2
"lib1","SARS-CoV-2","GGGGACCTTCGTAATT",3,54.76,10.06,-0.7,0.06,1.97,1.06,0,">1 nonsynonymous","C49F K56S N130D Q163M",4
"lib1","SARS-CoV-2","GGGGACGAAACATGGT",13,218.51,10.78,0.02,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGGACGGGCAACAAT",1,58.29,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D97F G101V T140R",3
"lib1","SARS-CoV-2","GGGGACTGAGGAAGGA",2,43.46,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F8Q Y21D D68C S200Y",4
"lib1","SARS-CoV-2","GGGGACTGTCTCGTCC",5,32.82,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","S43F A81P P149F",3
"lib1","SARS-CoV-2","GGGGACTTAACAGAGT",7,20.7,8.43,-2.33,0.11,2.83,1.03,0,">1 nonsynonymous","T100S F126S",2
"lib1","SARS-CoV-2","GGGGAGACCCATAGGT",3,8.8,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","L5H D90V Y165L",3
"lib1","SARS-CoV-2","GGGGAGAGTACTCGAC",1,19.91,10.14,-0.63,0.08,2.83,1.03,0,">1 nonsynonymous","T46I D98T E154V",3
"lib1","SARS-CoV-2","GGGGAGATGAACCCGA",2,15.17,7.15,-3.62,0.24,1.5,1.12,0.02,">1 nonsynonymous","C61Y D137M Q163L",3
"lib1","SARS-CoV-2","GGGGAGATGAGTGCTT",2,44.33,10.19,-0.57,0.08,2.86,1.03,0,">1 nonsynonymous","Y35P G155N N171Y",3
"lib1","SARS-CoV-2","GGGGAGCAACAATTCT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* N13R F134R E141V F167L",5
"lib1","SARS-CoV-2","GGGGAGGCGTCTTACT",5,89.53,6,-4.76,1.79,1.5,1.15,0.01,">1 nonsynonymous","V37C K94E",2
"lib1","SARS-CoV-2","GGGGAGTCGTTGGAAT",4,81.7,10.77,0.01,0.07,2.94,1.02,0,">1 nonsynonymous","R78S K199L",2
"lib1","SARS-CoV-2","GGGGAGTGACCCTACA",1,52.44,9.83,-0.93,0.05,2.86,1.06,0,">1 nonsynonymous","T3E T170F",2
"lib1","SARS-CoV-2","GGGGAGTGTCCGTTGT",3,33.98,10.33,-0.44,0.05,3,1,0,">1 nonsynonymous","K87S T100C",2
"lib1","SARS-CoV-2","GGGGAGTGTTACATGC",4,2.74,NA,NA,NA,NA,NA,NA,"stop","G9K N40* N120C F167Q Q176L",5
"lib1","SARS-CoV-2","GGGGAGTTATATTCCA",2,29.73,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G9S P96N N157I",3
"lib1","SARS-CoV-2","GGGGATAAATATAGGA",3,30.38,8.87,-1.89,0.26,1.61,1.32,0.03,">1 nonsynonymous","D34C S45L",2
"lib1","SARS-CoV-2","GGGGATAAATATCATA",2,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82M A105R C158E",3
"lib1","SARS-CoV-2","GGGGATACACAGGTGT",1,16.1,6,-4.76,1.5,1.5,1.08,0.01,">1 nonsynonymous","K56D A89L F134L T148C G166M",5
"lib1","SARS-CoV-2","GGGGATACCATTCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9R S36G R78* I104* Y121E R136P",6
"lib1","SARS-CoV-2","GGGGATACTCACCAAC",11,174.02,8.28,-2.48,0.14,2.37,1.1,0.01,">1 nonsynonymous","I2E G9M D90R L125K",4
"lib1","SARS-CoV-2","GGGGATCACGTATCTG",8,23.38,7.99,-2.77,0.33,1.5,1.03,0.04,">1 nonsynonymous","S41C K48W K56M T140W",4
"lib1","SARS-CoV-2","GGGGATCAGCTACTTT",2,31.88,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L L131W A145V G152R",4
"lib1","SARS-CoV-2","GGGGATGAAGATACTA",8,170.83,10.75,-0.02,0.06,2.88,1.01,0,">1 nonsynonymous","S36L Y91F T201V",3
"lib1","SARS-CoV-2","GGGGATGCGTAGATAA",6,27.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44T T55V I142N",3
"lib1","SARS-CoV-2","GGGGATGTGAAACACG",4,0.41,NA,NA,NA,NA,NA,NA,"stop","D59G N107A T201*",3
"lib1","SARS-CoV-2","GGGGCACTGAAAGTAG",3,55.28,10.74,-0.03,0.07,2.87,1.07,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GGGGCACTGTGTTACT",2,9.61,8.81,-1.95,0.09,2.77,1.04,0.01,"1 nonsynonymous","G146C",1
"lib1","SARS-CoV-2","GGGGCAGGCATAAGAA",2,1.15,NA,NA,NA,NA,NA,NA,"stop","L111* K132S Y178N",3
"lib1","SARS-CoV-2","GGGGCATCGTAGATTC",4,1.3,NA,NA,NA,NA,NA,NA,"stop","T85P K114A Y143N Q168*",4
"lib1","SARS-CoV-2","GGGGCCAATCTAAGGA",1,15.03,9.6,-1.16,0.14,2.74,1.23,0.01,">1 nonsynonymous","L60G Y119H",2
"lib1","SARS-CoV-2","GGGGCCACTAAGACGT",2,22.66,8.51,-2.25,0.12,2.96,1,0.01,">1 nonsynonymous","R73E Q163K",2
"lib1","SARS-CoV-2","GGGGCCAGTGTATAAA",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85W F167G",2
"lib1","SARS-CoV-2","GGGGCCCAAAAGATGA",1,12.46,6,-4.76,2,3,1.13,0.01,"1 nonsynonymous","A89E",1
"lib1","SARS-CoV-2","GGGGCCCAAATCCGTG",1,25.87,10.4,-0.36,0.09,2.87,1,0,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","GGGGCCGATTAAGATG",3,12.1,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N64I P82K N120M",3
"lib1","SARS-CoV-2","GGGGCCGCGAAGCAAG",2,0.12,NA,NA,NA,NA,NA,NA,"stop","F17Q R25* L60E",3
"lib1","SARS-CoV-2","GGGGCCGTATGATGAA",9,38.54,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","Y91V N130R C150Y",3
"lib1","SARS-CoV-2","GGGGCCTTTAATTCTT",18,247.46,10.76,0,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGGCGAAGACCACAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N1V A14Q N120K A145F A190F T201*",6
"lib1","SARS-CoV-2","GGGGCGAGTTTGTACA",4,23.72,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","T63G D75N K94H W106R Q144I R179M",6
"lib1","SARS-CoV-2","GGGGCGATATGTCAAT",1,41.54,9.41,-1.35,0.12,2.03,1.1,0.01,">1 nonsynonymous","C6W N120S F160L P197S",4
"lib1","SARS-CoV-2","GGGGCGCCTTATAAGA",8,127.21,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9A I80Y D98N",3
"lib1","SARS-CoV-2","GGGGCGGTTATAGGTT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N64V D90F R127* E141N",4
"lib1","SARS-CoV-2","GGGGCGTTGCATCCGT",12,1.26,NA,NA,NA,NA,NA,NA,"stop","A81M L122*",2
"lib1","SARS-CoV-2","GGGGCTACTTCAAAAT",3,33.79,6.01,-4.76,0.96,1.5,1.19,0.02,">1 nonsynonymous","A42P K56H I88R",3
"lib1","SARS-CoV-2","GGGGCTAGATAACCGC",3,40.09,6.14,-4.62,0.67,1.5,1.12,0.01,">1 nonsynonymous","L5V F12G Y35E R73M W106T G152L P177W",7
"lib1","SARS-CoV-2","GGGGCTAGTCTAGAAG",2,40.51,10.65,-0.12,0.07,2.81,1.06,0,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","GGGGCTATACCGCGAA",6,69.79,6.15,-4.62,0.53,1.5,1.18,0.01,">1 nonsynonymous","N92W Y123E S184F",3
"lib1","SARS-CoV-2","GGGGCTCCCGTCATGA",1,19.28,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G9I R73I W106P K199G",4
"lib1","SARS-CoV-2","GGGGCTCTCCCACTCA",3,93.02,9.79,-0.98,0.04,2.86,1.04,0,">1 nonsynonymous","T15P F62M F156S",3
"lib1","SARS-CoV-2","GGGGCTGAGGCGTCAA",2,1.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127E",1
"lib1","SARS-CoV-2","GGGGCTTAACTTATAT",2,7.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5W V11G V115D C150G",4
"lib1","SARS-CoV-2","GGGGCTTTAAGTGCAT",2,13.62,9.76,-1.01,0.18,1.62,1.16,0.01,">1 nonsynonymous","Y39E T55N A67S D97L V194I",5
"lib1","SARS-CoV-2","GGGGGAAAACTATCCA",4,6.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2S G9Q K94N N120L",4
"lib1","SARS-CoV-2","GGGGGAACATTGAAAA",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S N107E",2
"lib1","SARS-CoV-2","GGGGGAACCCGCAACC",3,51.63,8.05,-2.71,0.34,1.5,1.04,0.04,">1 nonsynonymous","T55N Y93L",2
"lib1","SARS-CoV-2","GGGGGACGGGACCGAC",3,16.23,6.39,-4.37,0.49,1.5,1.23,0.02,">1 nonsynonymous","V52S A89F G166Y",3
"lib1","SARS-CoV-2","GGGGGCAAATCGTACC",5,17.13,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T3M A14Q C31T Y91S L183F",5
"lib1","SARS-CoV-2","GGGGGCAACAACAATT",1,25.67,10.36,-0.4,0.08,2.79,1.12,0,">1 nonsynonymous","Y35S S200W",2
"lib1","SARS-CoV-2","GGGGGCAATGTCCGAT",1,7.55,6,-4.76,2,1.5,1.09,0.01,"1 nonsynonymous","V20R",1
"lib1","SARS-CoV-2","GGGGGCATTGTCCTTT",1,21.51,6,-4.76,1.61,1.5,1.12,0.02,">1 nonsynonymous","F12D D68V",2
"lib1","SARS-CoV-2","GGGGGCTTGGTCACAC",6,1.06,NA,NA,NA,NA,NA,NA,"stop","C6* F17* L122I Q168P",4
"lib1","SARS-CoV-2","GGGGGGAACTAGGTAT",1,17.02,10.77,0.01,0.06,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGGGGCCAAAAGGGT",3,21.48,7.31,-3.45,0.31,1.5,1.1,0.02,">1 nonsynonymous","N24L W106S",2
"lib1","SARS-CoV-2","GGGGGTGCCTGTATGT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","A18* S43D L60S P133I S139R",5
"lib1","SARS-CoV-2","GGGGTAAAACGCGCGG",4,63.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A42G I88F Y121V Y143T",4
"lib1","SARS-CoV-2","GGGGTAAAATACATTG",7,38.36,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","Y119A L131D",2
"lib1","SARS-CoV-2","GGGGTAACATAAATTT",1,19.89,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20M D75L G101W",3
"lib1","SARS-CoV-2","GGGGTAATAAACACTT",2,70.84,9.91,-0.86,0.1,2.2,1.02,0,"1 nonsynonymous","S19R",1
"lib1","SARS-CoV-2","GGGGTAATACCTAACA",5,27.7,9.7,-1.06,0.1,1.82,1.08,0,">1 nonsynonymous","K94S K128L",2
"lib1","SARS-CoV-2","GGGGTAATTCCATGGC",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K Y91D F126W F134R Y165R",5
"lib1","SARS-CoV-2","GGGGTACGCATGGAAC",2,34.14,10.18,-0.59,0.08,2.68,1.01,0,">1 nonsynonymous","S41M G174W",2
"lib1","SARS-CoV-2","GGGGTACGGGATATAT",2,54.06,9.45,-1.31,0.09,2.55,1.07,0,">1 nonsynonymous","A14D A105T F156V T201R",4
"lib1","SARS-CoV-2","GGGGTACTACCGTTAT",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S N118V C150Y K198R",4
"lib1","SARS-CoV-2","GGGGTACTATACAATG",4,54.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16V I28P C49A Y91P K128S",5
"lib1","SARS-CoV-2","GGGGTACTCACGCACA",2,22.48,9.82,-0.94,0.16,2.06,1.13,0.02,">1 nonsynonymous","N4S Y35V L122C",3
"lib1","SARS-CoV-2","GGGGTACTGCAACATA",1,5.55,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N4D C31Y D90G K114Q G155S G174R",6
"lib1","SARS-CoV-2","GGGGTACTTATTGCGA",2,24.15,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","D68R A81T D97N Y123T F167N",5
"lib1","SARS-CoV-2","GGGGTACTTCTAATAA",3,22.34,6,-4.76,0.46,3,1.04,0,">1 nonsynonymous","R27L D34R R78S P82V G86V Y119F T148R",7
"lib1","SARS-CoV-2","GGGGTAGATACTCAAT",5,39.12,6.48,-4.28,0.45,1.5,1.14,0.02,">1 nonsynonymous","Y35V V71W",2
"lib1","SARS-CoV-2","GGGGTAGCTATCGACG",2,17.35,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","D34G A42L K48E G86R",4
"lib1","SARS-CoV-2","GGGGTATCAAAATTCA",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132G P161L",2
"lib1","SARS-CoV-2","GGGGTATGAAAACAAT",3,18.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G51V P82W L95P",3
"lib1","SARS-CoV-2","GGGGTATGACGTGCAG",9,111.16,9.85,-0.92,0.09,2.39,1.04,0,">1 nonsynonymous","V11P L122N",2
"lib1","SARS-CoV-2","GGGGTATTAAGCTCCA",3,63.67,8.03,-2.74,0.19,1.89,1.13,0.01,">1 nonsynonymous","C6Y A145D",2
"lib1","SARS-CoV-2","GGGGTCCACCGCAGTT",10,185.23,9.93,-0.84,0.07,2.06,1.05,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GGGGTCCGATTAAAAT",7,54.79,6.57,-4.19,0.27,1.5,1.17,0.01,">1 nonsynonymous","D59F N107S L111P V153P N157Y",5
"lib1","SARS-CoV-2","GGGGTCGCATACACCT",2,24.24,10.76,0,0.07,2.9,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGGTCGGAGTCACTT",2,19.35,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y35D T85E Y91L I104S Y159P",5
"lib1","SARS-CoV-2","GGGGTCTCTTCTCGTG",4,86.98,10.15,-0.62,0.04,2.98,1,0,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","GGGGTGAGAAAAGCAT",7,52.35,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L57P F62L D90S D97H S113L L122Q A145Q",7
"lib1","SARS-CoV-2","GGGGTGAGATTATGAA",1,10.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K94N N107L",2
"lib1","SARS-CoV-2","GGGGTGCAAATGCTAT",5,4.14,NA,NA,NA,NA,NA,NA,"stop","T140R F160*",2
"lib1","SARS-CoV-2","GGGGTGCACAGTTCAT",5,14.11,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F62N C102Y R124L T201P",4
"lib1","SARS-CoV-2","GGGGTGCTAGAACATA",4,16.41,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103R A105S",2
"lib1","SARS-CoV-2","GGGGTGGAACACTAAG",1,10.44,6.74,-4.03,0.16,1.83,1.03,0,">1 nonsynonymous","Y50L Y91V W106N",3
"lib1","SARS-CoV-2","GGGGTGGACCCTTTCT",3,28.23,10.13,-0.64,0.09,2.75,1.1,0,">1 nonsynonymous","P54L Q144M F156M",3
"lib1","SARS-CoV-2","GGGGTGGTCAGCGTGT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","C6R K48G G86* I104Y L122* R124L T140* F167L",8
"lib1","SARS-CoV-2","GGGGTGTGTTAAAATG",10,132.54,10.39,-0.37,0.04,2.79,1,0,">1 nonsynonymous","F44G L122G P149L",3
"lib1","SARS-CoV-2","GGGGTTAAGGCCCAGG",2,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20C L60N V103P",3
"lib1","SARS-CoV-2","GGGGTTAATAATACTA",2,23.53,9.97,-0.79,0.12,2.22,1.03,0.01,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","GGGGTTACCGTGAAAC",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D S41W G116S",3
"lib1","SARS-CoV-2","GGGGTTATATGCCGTA",16,5.4,NA,NA,NA,NA,NA,NA,"stop","S43R K56W G117Q N130F Y175*",5
"lib1","SARS-CoV-2","GGGGTTATCAAATTTC",3,16.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1H D98K F126P",3
"lib1","SARS-CoV-2","GGGGTTCTACCCGCAG",2,32.48,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N40Q F47M C61G D68S F99Y Y119V",6
"lib1","SARS-CoV-2","GGGGTTCTGAGCAGGT",2,19.24,9.25,-1.51,0.18,1.82,1.1,0.01,">1 nonsynonymous","V11F D59K E186F",3
"lib1","SARS-CoV-2","GGGGTTGAACGACAAC",1,5.38,9.68,-1.08,0.32,2.5,1.01,0.03,">1 nonsynonymous","F44V I142M P149M L188W",4
"lib1","SARS-CoV-2","GGGGTTGGGCTCTGAA",1,17.56,10.72,-0.04,0.07,2.86,1.07,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GGGGTTTACAATGATC",7,82.47,8.37,-2.4,0.19,1.78,1.16,0.01,">1 nonsynonymous","T15F Y123K Y175M T201K",4
"lib1","SARS-CoV-2","GGGGTTTGGCGTCCTG",6,130.84,6.7,-4.06,0.19,1.68,1.19,0.01,"1 nonsynonymous","C150R",1
"lib1","SARS-CoV-2","GGGTAAAAATCCAACA",5,87.07,10.82,0.06,0.06,2.9,1.06,0,"1 nonsynonymous","K198R",1
"lib1","SARS-CoV-2","GGGTAAAATCAATGGC",3,32.47,9.78,-0.99,0.34,1.5,1.05,0.05,">1 nonsynonymous","N4T L60Q W106T N171I",4
"lib1","SARS-CoV-2","GGGTAAACATAAATTA",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S D34P Q79E V173T",4
"lib1","SARS-CoV-2","GGGTAAACGGCCCAAG",5,38.88,10.16,-0.6,0.07,3,1,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","GGGTAAAGTCGGTCTT",3,34.94,10.21,-0.55,0.06,2.8,1.04,0,">1 nonsynonymous","T3H S129M H189I",3
"lib1","SARS-CoV-2","GGGTAAAGTGCCATAA",5,35.34,9.75,-1.02,0.11,2.3,1.06,0,">1 nonsynonymous","C61I E135F",2
"lib1","SARS-CoV-2","GGGTAAATTTGCCATA",5,2.16,NA,NA,NA,NA,NA,NA,"stop","G9L D68F D90S W106* N110R",5
"lib1","SARS-CoV-2","GGGTAACAAGGACCAC",8,244.67,8.9,-1.87,0.06,2.83,1.09,0,">1 nonsynonymous","G117C P149K",2
"lib1","SARS-CoV-2","GGGTAACGATCAAAAT",1,11.61,6.84,-3.92,0.52,1.5,1.11,0.06,">1 nonsynonymous","R27E T55V A67L G117S I142S",5
"lib1","SARS-CoV-2","GGGTAACGGGTCCTAA",3,30.88,9.87,-0.9,0.12,2.15,1.01,0.01,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","GGGTAACTACGAACAG",5,185.99,10.72,-0.05,0.07,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGTAAGAAAACCCAA",1,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V T170G",2
"lib1","SARS-CoV-2","GGGTAAGAACAAACAA",6,1540.31,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","P96G Y119C Q176E",3
"lib1","SARS-CoV-2","GGGTAAGAATGACCTG",3,31.62,10.74,-0.02,0.08,2.67,1.22,0,">1 nonsynonymous","D59K T201F",2
"lib1","SARS-CoV-2","GGGTAAGAGCCAACTG",2,184.01,10.77,0,0.04,2.93,1.04,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","GGGTAAGCGACTGAAC",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F A89V R127T",3
"lib1","SARS-CoV-2","GGGTAATAAATCAAAA",3,54.36,9.8,-0.96,0.05,2.81,1.08,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","GGGTAATATAAATACC",1,1.42,NA,NA,NA,NA,NA,NA,"stop","V37* F99Y P161V",3
"lib1","SARS-CoV-2","GGGTAATCCTAAATGG",7,110.81,10.76,0,0.05,2.91,1.03,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","GGGTAATGACCGTATG",5,67.85,10.32,-0.44,0.08,2.74,1.02,0,">1 nonsynonymous","T46F N58D T100S",3
"lib1","SARS-CoV-2","GGGTAATGACTAGAAA",2,23.87,10.65,-0.12,0.07,3,1,0,">1 nonsynonymous","I104L L187I",2
"lib1","SARS-CoV-2","GGGTAATGTGCACCAC",1,0.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33I",1
"lib1","SARS-CoV-2","GGGTACAAAAATCTAA",1,1.79,NA,NA,NA,NA,NA,NA,"stop","F156M S200*",2
"lib1","SARS-CoV-2","GGGTACAAAGATCTGT",4,1.01,NA,NA,NA,NA,NA,NA,"stop","C49R A81G T201*",3
"lib1","SARS-CoV-2","GGGTACAAATAAAGCG",3,85.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T W106Y",2
"lib1","SARS-CoV-2","GGGTACAAGGTTCATA",8,98.17,9.92,-0.85,0.08,2.65,1.02,0,"1 nonsynonymous","Y165W",1
"lib1","SARS-CoV-2","GGGTACAATACAAACC",3,26.82,9.58,-1.18,0.11,1.87,1.1,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","GGGTACAGAAACAAAG",1,7.17,10.14,-0.62,0.09,2.94,1.07,0,">1 nonsynonymous","R27L Q84L",2
"lib1","SARS-CoV-2","GGGTACATCTAATTGG",2,6.55,9.85,-0.92,0.43,1.5,1.02,0.06,">1 nonsynonymous","D34I G51R N64T V181L",4
"lib1","SARS-CoV-2","GGGTACATTTCCACCA",3,134.95,9.99,-0.78,0.08,2.49,1.04,0,">1 nonsynonymous","N107G L122N",2
"lib1","SARS-CoV-2","GGGTACCGACTAGGCG",13,6.41,6.02,-4.75,2,1.5,1.22,0.04,">1 nonsynonymous","N13R C49M P82I V103K",4
"lib1","SARS-CoV-2","GGGTACCTACTTCCTC",6,35.23,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F44L A81I G86D A89C T148S",5
"lib1","SARS-CoV-2","GGGTACCTCATGCAGT",4,90.11,10.73,-0.04,0.05,2.95,1.03,0,"1 nonsynonymous","E76D",1
"lib1","SARS-CoV-2","GGGTACCTGATTTACG",3,56.96,9.31,-1.46,0.11,1.86,1.15,0,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","GGGTACGAGTGAAGAA",5,106.82,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D112W G146Q",2
"lib1","SARS-CoV-2","GGGTACGCATACACCA",1,7.51,6.14,-4.63,1.01,1.5,1.05,0.02,">1 nonsynonymous","C49T D59P G83N",3
"lib1","SARS-CoV-2","GGGTACGCCCTCGGGA",5,49,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y50S N107C G166C",3
"lib1","SARS-CoV-2","GGGTACGCGCACTGCA",2,72.6,10.78,0.02,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGTAGAGAGTGAATT",4,23.8,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T100C G117V N157H",3
"lib1","SARS-CoV-2","GGGTAGAGTCATCGCT",4,31.81,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","P133N E141D P161V Y175W",4
"lib1","SARS-CoV-2","GGGTAGATAAATGACA",4,80.56,8.79,-1.98,0.08,2.66,1.12,0,"1 nonsynonymous","P161N",1
"lib1","SARS-CoV-2","GGGTAGCGCCAATAAA",4,12.17,9.71,-1.06,0.16,2.58,1.06,0.01,">1 nonsynonymous","N64P T100A S139R",3
"lib1","SARS-CoV-2","GGGTAGCTCTTCGACG",1,8.49,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S41F I72S K94W V173L",4
"lib1","SARS-CoV-2","GGGTAGGTCGTACGAT",1,44.25,10.87,0.11,0.08,2.89,1.09,0,">1 nonsynonymous","L5D V37L",2
"lib1","SARS-CoV-2","GGGTAGTCAAATTGCA",4,52.61,6,-4.76,2,1.5,1.22,0.03,"1 nonsynonymous","P177Q",1
"lib1","SARS-CoV-2","GGGTAGTTTGCCCCTT",5,2.01,NA,NA,NA,NA,NA,NA,"stop","R16* A33R Y39S D68A G101* S108F N120F",7
"lib1","SARS-CoV-2","GGGTATAAAAACGAAC",8,131.52,6.13,-4.63,0.92,1.5,1.18,0.03,">1 nonsynonymous","A81D Y91V N157S",3
"lib1","SARS-CoV-2","GGGTATAAATTGTTTA",2,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L F12N L38H",3
"lib1","SARS-CoV-2","GGGTATAATATTCACG",5,32.62,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","Y66E L95A N107K G146V N151L",5
"lib1","SARS-CoV-2","GGGTATACTATTGTAA",3,127.54,10.6,-0.16,0.05,2.92,1,0,">1 nonsynonymous","L38M L122F",2
"lib1","SARS-CoV-2","GGGTATATAAACCTTG",1,7.04,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V103K R136C",2
"lib1","SARS-CoV-2","GGGTATATAGATATTT",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S E141N",2
"lib1","SARS-CoV-2","GGGTATCATGTTATGG",1,23.98,10.8,0.04,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGTATGAAGGATGTG",3,131.14,8.27,-2.5,0.14,2.06,1.14,0.01,">1 nonsynonymous","Y119Q Q176L",2
"lib1","SARS-CoV-2","GGGTATGAGGTAAAAA",1,50.69,10.19,-0.57,0.09,2.82,1.01,0,">1 nonsynonymous","F62W K94G",2
"lib1","SARS-CoV-2","GGGTATGATTTGAATT",8,28.31,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A33S W106E S139N",3
"lib1","SARS-CoV-2","GGGTATGCGATGAAAG",3,1.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143I",1
"lib1","SARS-CoV-2","GGGTATGGAACTATGA",1,11.6,10.69,-0.07,0.04,2.9,1.04,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","GGGTATGTCCCTTACA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","D68I G116L P149*",3
"lib1","SARS-CoV-2","GGGTATTAAACATGCC",1,0.46,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","GGGTATTCATTATAGT",2,52.65,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F62L Y143S G155V G166S",4
"lib1","SARS-CoV-2","GGGTATTGAAACCATC",8,64.21,10.57,-0.19,0.08,2.81,1,0,">1 nonsynonymous","S129Y F134L V173L",3
"lib1","SARS-CoV-2","GGGTATTTAGGCCCCT",2,16.43,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N64K L95P V153M",3
"lib1","SARS-CoV-2","GGGTCAAAAACTGGGA",4,120.1,6,-4.76,1.47,1.5,1.16,0,">1 nonsynonymous","Y35G S43P D68V G83Y D98E V182E",6
"lib1","SARS-CoV-2","GGGTCACGAGTGAATC",3,42.46,10.01,-0.75,0.12,2.51,1,0.01,">1 nonsynonymous","R27E V37F T46I A105S K128C",5
"lib1","SARS-CoV-2","GGGTCACTGAAATTGG",13,72.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61T P82H D97F V103C R127Q T140S A190L",7
"lib1","SARS-CoV-2","GGGTCAGACGTTGTGA",2,37.43,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","R25E G86N D97Q",3
"lib1","SARS-CoV-2","GGGTCATATAATGGTT",6,131.29,8.78,-1.98,0.05,2.72,1.07,0,">1 nonsynonymous","G117I G152S",2
"lib1","SARS-CoV-2","GGGTCATATATTCTTC",1,34.97,6,-4.76,0.67,1.5,1.1,0.01,">1 nonsynonymous","S43I Y93S T140N C150K",4
"lib1","SARS-CoV-2","GGGTCATGATAACACC",7,62.5,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y35A R127L Y165H",3
"lib1","SARS-CoV-2","GGGTCCAACAAAGAAC",5,25.45,6.9,-3.86,0.44,1.5,1.12,0.05,">1 nonsynonymous","S41A K87G N92Y I104V C150N",5
"lib1","SARS-CoV-2","GGGTCCAACGACTTAA",1,12.33,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V32M I104R Y159K",3
"lib1","SARS-CoV-2","GGGTCCACACTTACCA",1,7.78,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I72R P191H",2
"lib1","SARS-CoV-2","GGGTCCACCGGACTAA",4,48.13,10.77,0,0.08,2.97,1,0,">1 nonsynonymous","C61K G196E T201R",3
"lib1","SARS-CoV-2","GGGTCCCCATTTTATA",12,270.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9T P177R",2
"lib1","SARS-CoV-2","GGGTCCTTAATTTATA",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77K L95R",2
"lib1","SARS-CoV-2","GGGTCGAAATAGAGGA",3,25.44,9.64,-1.12,0.24,1.5,1.06,0.03,">1 nonsynonymous","E10L C102V",2
"lib1","SARS-CoV-2","GGGTCGAATAAGGTTT",1,32.73,10.14,-0.62,0.06,2.91,1,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","GGGTCGAGTAAGCAAT",4,7.13,6.39,-4.37,0.39,3,1.23,0.02,">1 nonsynonymous","T3E T15Y A22V",3
"lib1","SARS-CoV-2","GGGTCGATAGGCCAAG",2,48.12,10.06,-0.7,0.11,2.76,1,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","GGGTCGATTTGTACAA",5,26.66,6.11,-4.66,0.75,1.5,1.07,0.02,">1 nonsynonymous","N64K P82L V180R",3
"lib1","SARS-CoV-2","GGGTCGCAATATAGAG",7,1.32,NA,NA,NA,NA,NA,NA,"stop","G9* D112E",2
"lib1","SARS-CoV-2","GGGTCGCATCCCGCCA",11,0.53,NA,NA,NA,NA,NA,NA,"stop","N13S D59V D68* T85S V103S",5
"lib1","SARS-CoV-2","GGGTCTAAACCGATTA",5,46.68,9.47,-1.29,0.1,2.09,1.08,0,">1 nonsynonymous","I28V G116P T148P T201Y",4
"lib1","SARS-CoV-2","GGGTCTAAATCACCTA",7,54.26,6.2,-4.56,0.87,1.5,1.19,0.03,">1 nonsynonymous","V11S N58S N130R F167W",4
"lib1","SARS-CoV-2","GGGTCTAGACCTCTAG",4,19.56,6,-4.76,1.33,1.5,1.16,0.01,">1 nonsynonymous","F62E D68P T85D D98T",4
"lib1","SARS-CoV-2","GGGTCTAGATCCACCA",2,47.33,10.4,-0.37,0.06,2.89,1.05,0,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","GGGTCTATAACGAAAT",2,33.68,8.47,-2.29,0.12,2.01,1.03,0.01,"1 nonsynonymous","G74T",1
"lib1","SARS-CoV-2","GGGTCTCAACAAGAAA",4,0.21,NA,NA,NA,NA,NA,NA,"stop","G9* G83I A89N",3
"lib1","SARS-CoV-2","GGGTCTCAACGAAGTT",4,119.13,10.34,-0.42,0.04,2.9,1.02,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","GGGTCTCAAGTAAAAG",5,72.86,10.15,-0.61,0.05,2.24,1.11,0,">1 nonsynonymous","A81T P149N E154S",3
"lib1","SARS-CoV-2","GGGTCTGAAGCACCTG",6,92.38,10.74,-0.02,0.05,2.93,1.04,0,">1 nonsynonymous","V11I S41T S200Y",3
"lib1","SARS-CoV-2","GGGTCTGACCCTCTTG",9,16.98,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","I2S D34F F99T",3
"lib1","SARS-CoV-2","GGGTCTTCTCCCCTAC",3,30.15,10.8,0.04,0.11,2.89,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGTCTTGCAAGAAAG",14,316.13,10.43,-0.34,0.05,2.84,1.05,0,"1 nonsynonymous","Y35G",1
"lib1","SARS-CoV-2","GGGTGAATCTTCAGAC",2,39.48,10.67,-0.1,0.06,2.87,1.05,0,">1 nonsynonymous","T3G L131I",2
"lib1","SARS-CoV-2","GGGTGACAATGTGGTT",5,38.55,10.63,-0.13,0.04,2.91,1.01,0,">1 nonsynonymous","F99L L122K",2
"lib1","SARS-CoV-2","GGGTGACATGTATTAC",2,98.4,10.13,-0.64,0.08,2.56,1.09,0,">1 nonsynonymous","L5R D90N R136C",3
"lib1","SARS-CoV-2","GGGTGACGAAAAGATG",2,61.27,10.72,-0.05,0.13,2.91,1.07,0.01,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","GGGTGAGCTGTTAAGT",1,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GGGTGAGGCCTATCTG",2,7.3,6.32,-4.44,0.37,2.14,1.11,0.01,">1 nonsynonymous","D90Y F126T G152F",3
"lib1","SARS-CoV-2","GGGTGATAGAGCACTT",1,78.29,10.69,-0.07,0.04,2.96,1,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","GGGTGATTATCAATTT",3,17.49,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y123S C158T Q168M",3
"lib1","SARS-CoV-2","GGGTGATTTAACGATA",6,52.83,10.8,0.03,0.05,2.96,1.01,0,">1 nonsynonymous","G9A N58M",2
"lib1","SARS-CoV-2","GGGTGCAAAACACTCC",5,57.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48A G101N L122S",3
"lib1","SARS-CoV-2","GGGTGCACCCGTGGAT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y39L T201R",3
"lib1","SARS-CoV-2","GGGTGCCATGTTTGAA",3,30.46,10.78,0.02,0.06,2.92,1,0,">1 nonsynonymous","R16I C195D",2
"lib1","SARS-CoV-2","GGGTGCCCAATGTGCA",3,45.87,9.97,-0.79,0.1,2.57,1.04,0,">1 nonsynonymous","N4H S45L",2
"lib1","SARS-CoV-2","GGGTGCCCGAGGTTCC",10,55.1,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","L5G F12S Y165T",3
"lib1","SARS-CoV-2","GGGTGCCTGACAAATA",4,114.85,9.51,-1.26,0.09,2.68,1.1,0,">1 nonsynonymous","Y121L Q163E",2
"lib1","SARS-CoV-2","GGGTGCCTGATTAAAT",1,11.96,10.05,-0.71,0.11,2.7,1.15,0.01,">1 nonsynonymous","A33W P96T",2
"lib1","SARS-CoV-2","GGGTGCTACTTTCGAT",1,2.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","GGGTGCTAGCCGTCCT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","T15W K26* L57T A89V Y143F",5
"lib1","SARS-CoV-2","GGGTGGACTTACTAGA",8,28.11,6,-4.76,1.85,3,1.24,0.01,">1 nonsynonymous","Y91S L131W",2
"lib1","SARS-CoV-2","GGGTGGAGTAACAGAC",9,70.41,6.24,-4.52,0.72,1.5,1.22,0.02,">1 nonsynonymous","T3L Y35V I88N E135T",4
"lib1","SARS-CoV-2","GGGTGGAGTAGTATCC",1,27.92,10.66,-0.1,0.05,2.97,1.02,0,"1 nonsynonymous","T46N",1
"lib1","SARS-CoV-2","GGGTGGATAAATATAA",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L P82K",2
"lib1","SARS-CoV-2","GGGTGGATGATACCTA",4,181.77,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","N107P Y143I P177K",3
"lib1","SARS-CoV-2","GGGTGGGACCCAGGTT",1,38.4,10.71,-0.05,0.05,2.84,1.1,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","GGGTGGGCCGCGTTAC",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21I K26M N107W R136A",4
"lib1","SARS-CoV-2","GGGTGGGTGTGAAAAA",2,44.95,10.73,-0.03,0.07,2.95,1.06,0,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","GGGTGGTATCAATAGA",3,17.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W I80R D98T K128T G166R",5
"lib1","SARS-CoV-2","GGGTGTCAACTGTTCT",4,69.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C31N Y93S P177Q H189C",4
"lib1","SARS-CoV-2","GGGTGTGAACGTAACG",1,63.18,10.31,-0.45,0.04,2.89,1.01,0,">1 nonsynonymous","A22E S45P",2
"lib1","SARS-CoV-2","GGGTGTGAATATTTGG",4,24.41,6,-4.76,2,3,1.08,0,">1 nonsynonymous","Y35M G51Y N107C N118C Q163G P197S T201R",7
"lib1","SARS-CoV-2","GGGTGTGCTCAAGGCG",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44M G51R E141F P149M V182P",5
"lib1","SARS-CoV-2","GGGTGTGTAAAATTGA",1,169.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17E D137P Q176V",3
"lib1","SARS-CoV-2","GGGTGTGTTACAATGA",3,47.21,10.78,0.01,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGTGTTATGAGATAA",1,0.83,NA,NA,NA,NA,NA,NA,"stop","S53* G101V R127*",3
"lib1","SARS-CoV-2","GGGTTAAAAAAAACAC",1,38.82,10.3,-0.46,0.07,2.95,1,0,">1 nonsynonymous","N58F V115E T201K",3
"lib1","SARS-CoV-2","GGGTTAAAAAGATCAC",5,55.33,10.32,-0.45,0.05,2.95,1,0,">1 nonsynonymous","K56A T63L G155T",3
"lib1","SARS-CoV-2","GGGTTAAACAACCCCG",6,42.81,6,-4.76,1.74,1.5,1.16,0.01,">1 nonsynonymous","Y66N Y91N F99G",3
"lib1","SARS-CoV-2","GGGTTAAACTCTTCCT",2,35.2,10.06,-0.7,0.1,2.45,1.02,0,">1 nonsynonymous","D59A N107R",2
"lib1","SARS-CoV-2","GGGTTAAACTTCCCGT",1,55.11,10.79,0.02,0.08,2.86,1.04,0,"1 nonsynonymous","A192L",1
"lib1","SARS-CoV-2","GGGTTAACTCCGTTGT",6,5.09,NA,NA,NA,NA,NA,NA,"stop","T15D D59C D97H S113*",4
"lib1","SARS-CoV-2","GGGTTAACTTTCATAA",10,143.79,6,-4.76,1.51,1.5,1.16,0.01,">1 nonsynonymous","G152D F167N",2
"lib1","SARS-CoV-2","GGGTTAAGAATGCCCT",2,57.24,10.7,-0.06,0.03,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGGTTAAGCAATTCCA",6,40.6,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14H N58S W106G F160C",4
"lib1","SARS-CoV-2","GGGTTAATGTAAGGAG",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N N110R C150I",3
"lib1","SARS-CoV-2","GGGTTAATTGAGACAA",3,32.21,6,-4.76,1.86,1.5,1.12,0.01,">1 nonsynonymous","Y21S G83M N118P",3
"lib1","SARS-CoV-2","GGGTTACAACCATAAC",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N Y50S N110M R127K",4
"lib1","SARS-CoV-2","GGGTTACAATTAGCCG",1,51.31,10.64,-0.12,0.05,2.89,1.05,0,">1 nonsynonymous","S53A T85M",2
"lib1","SARS-CoV-2","GGGTTACAGAAAAGAT",2,5.74,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F62Q R124A E141V",3
"lib1","SARS-CoV-2","GGGTTACATAACCAAG",5,71.14,8.62,-2.14,0.19,1.5,1.11,0.01,">1 nonsynonymous","V115S D137A",2
"lib1","SARS-CoV-2","GGGTTACCTTAATCGT",7,58.97,9.84,-0.92,0.13,2,1.06,0.01,">1 nonsynonymous","K94S V173C",2
"lib1","SARS-CoV-2","GGGTTACGAACTCCAT",5,94.1,10.36,-0.4,0.04,2.95,1.01,0,">1 nonsynonymous","F47V K87M K128P",3
"lib1","SARS-CoV-2","GGGTTACGACAGGCCG",3,25.76,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F8D S19F Y123S K132R F134L P149H",6
"lib1","SARS-CoV-2","GGGTTACGACGAAGCG",4,41.81,9.72,-1.05,0.17,1.72,1.12,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","GGGTTAGGAAAACTAG",6,127.24,10.5,-0.27,0.05,2.9,1.05,0,"1 nonsynonymous","K87A",1
"lib1","SARS-CoV-2","GGGTTATCTGACCTAA",2,30.38,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","I28T T46S N64F N107H S113R",5
"lib1","SARS-CoV-2","GGGTTATGACAAATGA",1,57.81,9.91,-0.86,0.05,2.86,1.08,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","GGGTTATTCTGACGAG",4,60.49,9,-1.77,0.07,2.36,1.12,0,">1 nonsynonymous","V37C P177S",2
"lib1","SARS-CoV-2","GGGTTCAAAAATAAAG",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y V37S G51F A89R E154D",5
"lib1","SARS-CoV-2","GGGTTCAATTGCCTCA",2,51.39,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S45Q S147C N157T Q176S",4
"lib1","SARS-CoV-2","GGGTTCATCTAAGAAC",1,0.85,NA,NA,NA,NA,NA,NA,"stop","V103D D112*",2
"lib1","SARS-CoV-2","GGGTTCATTGTGCAAG",1,37.71,10.77,0.01,0.08,2.84,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGTTCCGGTAACATC",2,41.1,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10G G86Y",2
"lib1","SARS-CoV-2","GGGTTCGAAGAGGATT",3,6.48,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","K87I W106S R136A Q144L",4
"lib1","SARS-CoV-2","GGGTTCTACGATACAC",1,20.89,6,-4.76,2,1.69,1.17,0.02,">1 nonsynonymous","L95Q A105V G174E",3
"lib1","SARS-CoV-2","GGGTTGAAATTTACCT",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V G101S S113C R127H S147P Q176K F185S K198G",8
"lib1","SARS-CoV-2","GGGTTGACTTGCGATG",3,69.08,10.87,0.1,0.06,2.94,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGGTTGCCATCGCGGG",8,63.07,6.03,-4.74,1.15,1.5,1.2,0.02,">1 nonsynonymous","F12I D98Q C150R",3
"lib1","SARS-CoV-2","GGGTTGCCCTTGGTCC",6,36.58,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P96H S108C N118M S164G",4
"lib1","SARS-CoV-2","GGGTTGGCATAATATA",5,38.15,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","C61N I72V G86F",3
"lib1","SARS-CoV-2","GGGTTGGTCGTGGCGC",8,125.82,10.45,-0.31,0.06,2.84,1.02,0,"1 nonsynonymous","E186I",1
"lib1","SARS-CoV-2","GGGTTGGTTACGCTGA",1,31.1,8.71,-2.06,0.11,2.82,1.17,0.01,">1 nonsynonymous","I2C D59V Y119E",3
"lib1","SARS-CoV-2","GGGTTGGTTACTAGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","E10V S41C P96R P149S K198*",5
"lib1","SARS-CoV-2","GGGTTGTAAACTCTTT",1,4.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","GGGTTGTCAACTTTAG",5,20.33,6.32,-4.45,0.52,1.5,1.14,0.02,">1 nonsynonymous","N30W V103L",2
"lib1","SARS-CoV-2","GGGTTGTGATAAAGTT",1,13.45,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N13P E135K",2
"lib1","SARS-CoV-2","GGGTTTAAAACCTCAA",2,21.49,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","N13F V37S F44E K87C N120M F167W V173L",7
"lib1","SARS-CoV-2","GGGTTTAACGCGAATC",7,101.63,10.8,0.03,0.08,2.87,1.09,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","GGGTTTAGAACTAGTA",3,19.08,6.16,-4.6,0.55,1.5,1.13,0.01,">1 nonsynonymous","E10G Y91S G152Y",3
"lib1","SARS-CoV-2","GGGTTTAGGGGAAGCC",4,76.96,10.09,-0.67,0.06,2.23,1.05,0,">1 nonsynonymous","L5P V52Y Y123I",3
"lib1","SARS-CoV-2","GGGTTTAGGTTATGTG",1,5.09,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","V37I P96K W106G N118R G166S",5
"lib1","SARS-CoV-2","GGGTTTAGTATGCGGA",4,0,NA,NA,NA,NA,NA,NA,"stop","V37L C49L Y50* A89P Y123*",5
"lib1","SARS-CoV-2","GGGTTTCACCAAAGCT",5,36.33,9.45,-1.31,0.23,1.82,1.08,0.02,"1 nonsynonymous","F185R",1
"lib1","SARS-CoV-2","GGGTTTCCTCACGCTT",8,2.48,NA,NA,NA,NA,NA,NA,"stop","F44W L95T W106*",3
"lib1","SARS-CoV-2","GGGTTTCTTCTAAACG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S53Y N58* G83R I104Y R136L N157S",6
"lib1","SARS-CoV-2","GGGTTTGATCTATACA",5,78.04,9.94,-0.83,0.06,2.77,1.03,0,">1 nonsynonymous","G74H L122A",2
"lib1","SARS-CoV-2","GGGTTTTGCTGCCATA",9,132.22,6.08,-4.68,0.47,1.5,1.13,0.01,">1 nonsynonymous","S69E L125Y Q144H Y175V P191R K198V",6
"lib1","SARS-CoV-2","GGGTTTTGTACACCCG",1,45.81,10.31,-0.46,0.04,2.79,1.03,0,">1 nonsynonymous","D75K D98L",2
"lib1","SARS-CoV-2","GGGTTTTTTAGACAGG",6,120.67,9.33,-1.43,0.16,1.5,1.08,0.01,">1 nonsynonymous","G9Y K94S A105S",3
"lib1","SARS-CoV-2","GGTAAAAAATCCCCAT",4,108.59,10.57,-0.2,0.08,2.99,1.02,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","GGTAAAAACCACACGC",1,7.46,6,-4.76,2,3,1.12,0.02,">1 nonsynonymous","T3D V103S T201K",3
"lib1","SARS-CoV-2","GGTAAAAACCTGCTGT",4,113.51,10.1,-0.67,0.05,2.89,1,0,">1 nonsynonymous","R78K Y121S",2
"lib1","SARS-CoV-2","GGTAAAAACGTTGCTA",3,45.74,10.77,0.01,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAAAAGCAGGCTA",6,92.21,10.77,0,0.06,2.93,1.05,0,"1 nonsynonymous","T46Y",1
"lib1","SARS-CoV-2","GGTAAAACCAACCCGC",2,14.17,6,-4.76,0.24,2.9,1.15,0,">1 nonsynonymous","G9L I88R A89V",3
"lib1","SARS-CoV-2","GGTAAAACCGAAACCG",1,14.84,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R27Y G101E",2
"lib1","SARS-CoV-2","GGTAAAACGCTATCCG",7,21.41,6,-4.76,1.38,1.5,1.19,0.01,">1 nonsynonymous","D98E L131R R179V",3
"lib1","SARS-CoV-2","GGTAAAACGGAATAGT",1,44.35,9.76,-1.01,0.08,2.46,1.02,0,">1 nonsynonymous","R16S K114V S129C V173S",4
"lib1","SARS-CoV-2","GGTAAAACTTTTTTCG",1,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64W N120F L162Y L183I T201Y",5
"lib1","SARS-CoV-2","GGTAAAAGATAGCTCA",2,17.32,9.92,-0.84,0.07,2.88,1.06,0,">1 nonsynonymous","L5T A145Q",2
"lib1","SARS-CoV-2","GGTAAAAGGAGGCTAA",5,10.87,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","S45G F99L G166R V173R",4
"lib1","SARS-CoV-2","GGTAAAATATTGCACA",5,77.87,10.66,-0.11,0.06,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAAATCGACCTTC",1,14.03,9.98,-0.79,0.23,2.12,1.02,0.02,"1 nonsynonymous","S139W",1
"lib1","SARS-CoV-2","GGTAAACAAGCCCTAC",2,28.05,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","V20S L95Y",2
"lib1","SARS-CoV-2","GGTAAACACAAAGTAC",2,123.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S36I S41H G86V D90E N120T",5
"lib1","SARS-CoV-2","GGTAAACAGATGGTAT",1,16.1,9.22,-1.55,0.07,2.99,1.07,0,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","GGTAAACCCCTAATAG",5,33.79,9.74,-1.02,0.12,2.39,1.15,0,">1 nonsynonymous","V11A P54L",2
"lib1","SARS-CoV-2","GGTAAACCTAACTCGT",4,24.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y143S R179H",2
"lib1","SARS-CoV-2","GGTAAACGACTAGCAA",3,55.16,6,-4.76,1.45,1.5,1.21,0.01,">1 nonsynonymous","N1G F12G R124S V153K",4
"lib1","SARS-CoV-2","GGTAAACTAAAAGAAA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","F8N N120* P149Y",3
"lib1","SARS-CoV-2","GGTAAACTATATAAAA",3,55.66,10.79,0.02,0.08,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAACTCTGCCCAA",10,70,10.74,-0.02,0.05,2.88,1.05,0,">1 nonsynonymous","F8W D59N E141D A192S",4
"lib1","SARS-CoV-2","GGTAAACTTTCCCGAG",1,57.21,10.83,0.07,0.06,2.93,1.03,0,">1 nonsynonymous","I2S S164C",2
"lib1","SARS-CoV-2","GGTAAAGAACCAGCTG",5,50.99,10.81,0.05,0.07,2.89,1.05,0,">1 nonsynonymous","S36A K128G",2
"lib1","SARS-CoV-2","GGTAAAGAATAATTAA",5,105.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L57V N64R Y178D",3
"lib1","SARS-CoV-2","GGTAAAGACGACTACA",3,53.3,7.02,-3.74,0.33,1.5,1.13,0.02,">1 nonsynonymous","C6P I28T N110W",3
"lib1","SARS-CoV-2","GGTAAAGATAGATGAG",9,166.21,10.77,0,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAAGATCACAACG",1,17.03,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I138G C150R P197Q",3
"lib1","SARS-CoV-2","GGTAAAGCCTATGCGA",13,271.67,9.63,-1.13,0.08,2.42,1.07,0,">1 nonsynonymous","F8I G155I",2
"lib1","SARS-CoV-2","GGTAAAGGATAAGCAT",4,66.29,10.51,-0.26,0.06,2.88,1.05,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","GGTAAAGGGATCACTG",2,536.24,10.64,-0.12,0.04,2.88,1.07,0,"1 nonsynonymous","S164T",1
"lib1","SARS-CoV-2","GGTAAAGTAATGGAAG",4,46.24,10.93,0.16,0.12,2.85,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAAGTAGGCCGAT",6,94.59,10.78,0.01,0.09,2.8,1.03,0,">1 nonsynonymous","P7D K114Y",2
"lib1","SARS-CoV-2","GGTAAAGTGTACTCGC",3,20.9,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T55S D97F F134P K198G",4
"lib1","SARS-CoV-2","GGTAAAGTTAATTGGA",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Y S43I Q84S R127L R136E Y175N",6
"lib1","SARS-CoV-2","GGTAAAGTTCCTTAAT",2,56.99,10.83,0.06,0.07,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAAAGTTTACCCTA",4,128.48,10.64,-0.12,0.04,2.92,1.05,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","GGTAAATAAGTTTAAA",8,127.1,9.96,-0.8,0.06,2.34,1.04,0,">1 nonsynonymous","F185T A192E",2
"lib1","SARS-CoV-2","GGTAAATACGACTATC",2,25.23,6.08,-4.68,0.55,1.5,1.15,0.01,">1 nonsynonymous","W23N A89H",2
"lib1","SARS-CoV-2","GGTAAATACGTACTTG",3,44.62,10.7,-0.06,0.07,2.87,1.05,0,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","GGTAAATACTTTGAAA",8,105.11,10.09,-0.67,0.06,2.87,1.04,0,">1 nonsynonymous","V37A A145R",2
"lib1","SARS-CoV-2","GGTAAATAGGGGAGAC",6,59.7,10.29,-0.48,0.06,2.84,1.08,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","GGTAAATATACCTTCG",1,18.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58Q G83H K114G G172Q",4
"lib1","SARS-CoV-2","GGTAAATATAGATAGG",9,117.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N107G C158L",2
"lib1","SARS-CoV-2","GGTAAATCTAAAGTAT",1,11.03,10.73,-0.04,0.17,2.94,1.02,0.02,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GGTAAATGATGTAATA",16,125.47,8.88,-1.89,0.12,2.15,1.13,0.01,">1 nonsynonymous","A33K S43E V115G G155K",4
"lib1","SARS-CoV-2","GGTAAATTTGGAAATC",4,32.06,10.76,0,0.07,2.84,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTAAATTTTATGTAC",4,51.19,10.08,-0.69,0.05,2.72,1,0,">1 nonsynonymous","P7T N40L P149N",3
"lib1","SARS-CoV-2","GGTAACAAAAATAACA",3,19.25,10.86,0.09,0.09,2.92,1.02,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","GGTAACAAAACAAGCA",1,20.03,10.77,0.01,0.1,2.81,1.13,0,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","GGTAACAATTACTCTG",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T W106P K132R E141V Y159A",5
"lib1","SARS-CoV-2","GGTAACATGAGCCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11H S184*",2
"lib1","SARS-CoV-2","GGTAACCAACCTGCCA",2,5.43,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","S19Q I104Q G117R",3
"lib1","SARS-CoV-2","GGTAACCCTCTCCTAT",2,38.65,9.46,-1.31,0.17,1.62,1.15,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","GGTAACCGCAATATGT",3,20.5,6.24,-4.52,0.62,1.5,1.12,0.03,">1 nonsynonymous","N118C Y175L",2
"lib1","SARS-CoV-2","GGTAACCTACTGTATG",1,28.04,9.35,-1.41,0.08,2.61,1.15,0,">1 nonsynonymous","Y39I P149L G155C",3
"lib1","SARS-CoV-2","GGTAACCTGAGCCTAA",7,98.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y35A P96V Y165W",3
"lib1","SARS-CoV-2","GGTAACCTTGTTAAAT",4,15.43,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","D97Y S113V S129Y R136T",4
"lib1","SARS-CoV-2","GGTAACGAATACCTGC",9,24.43,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27L A89S F99N",3
"lib1","SARS-CoV-2","GGTAACGACAACCACA",2,26.58,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S43P C61S P177H",3
"lib1","SARS-CoV-2","GGTAACGCAAAGAAAC",2,16.63,10.26,-0.5,0.07,2.98,1,0,">1 nonsynonymous","I2L G9L A33C",3
"lib1","SARS-CoV-2","GGTAACGCCAAGTATC",4,30.89,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","S45P P54L I88W C150I",4
"lib1","SARS-CoV-2","GGTAACGTACCACCCA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","L60C N120R L125S Y165* L188P",5
"lib1","SARS-CoV-2","GGTAACGTCGCGAGGC",1,36.58,10.62,-0.15,0.12,2.66,1.07,0,"1 nonsynonymous","K94R",1
"lib1","SARS-CoV-2","GGTAACGTTGAGACGT",3,49.07,10.07,-0.69,0.07,2.89,1.02,0,">1 nonsynonymous","L5E T170K",2
"lib1","SARS-CoV-2","GGTAACTCTTAAAGGA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","K48* D97M Y143F V153F",4
"lib1","SARS-CoV-2","GGTAAGAAACTAACCT",1,19.2,10.66,-0.1,0.06,2.9,1.01,0,">1 nonsynonymous","N120F T140I",2
"lib1","SARS-CoV-2","GGTAAGAAATCATATT",7,80.65,9.64,-1.12,0.15,2.25,1.05,0.01,">1 nonsynonymous","C31V P149C",2
"lib1","SARS-CoV-2","GGTAAGAAGCAAATGA",4,43.85,10.9,0.13,0.14,2.83,1.03,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GGTAAGACATCAATAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","K56L T148C F160Q P177*",4
"lib1","SARS-CoV-2","GGTAAGACCGATGCAA",7,81.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19M G101L",2
"lib1","SARS-CoV-2","GGTAAGAGCCACTATA",2,41.49,8.65,-2.11,0.26,1.87,1.16,0.04,">1 nonsynonymous","Y123R Y178E",2
"lib1","SARS-CoV-2","GGTAAGAGCTATTCAA",2,46.92,9.81,-0.96,0.13,2.04,1.07,0.01,">1 nonsynonymous","N109V R136A F160A",3
"lib1","SARS-CoV-2","GGTAAGATACGCCCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6I N13* C61V D97H L122E",5
"lib1","SARS-CoV-2","GGTAAGATATATGAAG",5,95.92,10.73,-0.03,0.03,2.96,1.03,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","GGTAAGATCGCCTCTG",11,109.43,9.44,-1.32,0.09,2.6,1.06,0,">1 nonsynonymous","F8V G174R",2
"lib1","SARS-CoV-2","GGTAAGATGATCCTGA",4,5.94,6.74,-4.02,0.56,3,1.23,0.02,">1 nonsynonymous","N40H I104N",2
"lib1","SARS-CoV-2","GGTAAGATTGCTATAA",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K D90S L95R P149Q F160G",5
"lib1","SARS-CoV-2","GGTAAGCAAGCTTTAG",3,29.94,10.76,0,0.12,2.78,1.15,0.01,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","GGTAAGCGAAACCCGG",4,9.94,NA,NA,NA,NA,NA,NA,"stop","T3N G83L I88D V103* S113K",5
"lib1","SARS-CoV-2","GGTAAGTAAGGTCTGT",2,30.34,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Q79S G86C P177Y K199R",4
"lib1","SARS-CoV-2","GGTAAGTCAACTCGTA",6,35.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F134T P149W N157F",3
"lib1","SARS-CoV-2","GGTAAGTCACGACTGC",1,8.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113Y F160W S184N K199G",4
"lib1","SARS-CoV-2","GGTAAGTCATGCGTGA",7,219.92,10.82,0.05,0.06,2.92,1.04,0,"1 nonsynonymous","Y178H",1
"lib1","SARS-CoV-2","GGTAAGTTTACCAACT",12,113.9,10.53,-0.23,0.04,2.88,1.06,0,">1 nonsynonymous","K87T T140L",2
"lib1","SARS-CoV-2","GGTAATAATTAGATCC",2,0,NA,NA,NA,NA,NA,NA,"stop","A22T C61* K199T",3
"lib1","SARS-CoV-2","GGTAATACAAGTTAAT",4,17.73,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","K56S F99H V115R G152P",4
"lib1","SARS-CoV-2","GGTAATACTCCCGGAT",9,42.19,6,-4.76,1.48,1.5,1.1,0.01,">1 nonsynonymous","G51N P96H W106R",3
"lib1","SARS-CoV-2","GGTAATACTTCGTTGC",1,55.49,8.96,-1.81,0.19,1.5,1.04,0.02,">1 nonsynonymous","L38S T148P",2
"lib1","SARS-CoV-2","GGTAATAGTAATTGGG",4,41.83,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N30V V77P F99C",3
"lib1","SARS-CoV-2","GGTAATAGTTGAACCT",1,155.86,10.62,-0.15,0.03,2.91,1.03,0,"1 nonsynonymous","E10T",1
"lib1","SARS-CoV-2","GGTAATATAAACACAA",2,76.73,10.61,-0.16,0.06,2.9,1.03,0,">1 nonsynonymous","S41I K56Q",2
"lib1","SARS-CoV-2","GGTAATATATTGAGAT",2,2.1,NA,NA,NA,NA,NA,NA,"stop","C6S T15L Y91S S129L E141* Q176S",6
"lib1","SARS-CoV-2","GGTAATATCAAAATAG",7,98.79,10.76,0,0.06,2.8,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAATATCTGTAGAA",12,171.53,8.43,-2.34,0.16,2.02,1.16,0.01,">1 nonsynonymous","R25H N118K",2
"lib1","SARS-CoV-2","GGTAATCAATTATTAC",8,89.64,10,-0.76,0.07,1.97,1.04,0,"1 nonsynonymous","L38R",1
"lib1","SARS-CoV-2","GGTAATCATACCAGTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G D98G N109D Y143D",4
"lib1","SARS-CoV-2","GGTAATCCAAGAAAAC",1,17.01,10.73,-0.04,0.03,2.94,1.06,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","GGTAATCCCAGTAAAA",2,2.48,NA,NA,NA,NA,NA,NA,"stop","G86R I142* T201W",3
"lib1","SARS-CoV-2","GGTAATCGACCGATAA",13,8.28,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","GGTAATCGCAACTTAT",4,17.07,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T3F L95E P133G",3
"lib1","SARS-CoV-2","GGTAATCGCAATACCC",2,24.7,10.27,-0.5,0.07,2.86,1.13,0,">1 nonsynonymous","E10D N118E",2
"lib1","SARS-CoV-2","GGTAATCGCATGTAAA",1,8.76,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","R27V T55R I104D",3
"lib1","SARS-CoV-2","GGTAATCTCATTCGAC",2,33.16,6,-4.76,1.97,2.99,1.15,0,">1 nonsynonymous","V11Y C150F",2
"lib1","SARS-CoV-2","GGTAATCTGTGCTTGT",2,46.77,10.38,-0.39,0.05,2.79,1.06,0,">1 nonsynonymous","D90N A105S L188M",3
"lib1","SARS-CoV-2","GGTAATGAACTCATGC",1,29.37,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N107V F134K G196Q",3
"lib1","SARS-CoV-2","GGTAATGATTATCAAT",1,13.97,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","N13L N92H N151R",3
"lib1","SARS-CoV-2","GGTAATGCACCGTCCT",1,11.36,10.67,-0.09,0.06,2.97,1.01,0,">1 nonsynonymous","G9Y R78C",2
"lib1","SARS-CoV-2","GGTAATGCCAAAGATA",1,9.73,6,-4.76,1.59,3,1.21,0.01,">1 nonsynonymous","S41H P96L N157K A190W",4
"lib1","SARS-CoV-2","GGTAATGCGCAGAGGA",4,6.3,8.47,-2.3,0.12,2.91,1.04,0.01,">1 nonsynonymous","S36M D97C Y119Q P149H",4
"lib1","SARS-CoV-2","GGTAATGGAAGCCTAA",6,1.31,NA,NA,NA,NA,NA,NA,"stop","I2P I88*",2
"lib1","SARS-CoV-2","GGTAATGGCAACTTTA",3,1.22,NA,NA,NA,NA,NA,NA,"stop","F47L L57* P82L D90S T201G",5
"lib1","SARS-CoV-2","GGTAATGGGTATCCTG",2,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T S45H C49L P82Y",4
"lib1","SARS-CoV-2","GGTAATGTACTCACGC",4,17.5,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N92F N120G K128L",3
"lib1","SARS-CoV-2","GGTAATGTTAGTTGAT",1,14.79,7.96,-2.8,0.37,1.5,1,0.06,">1 nonsynonymous","Y39T V103L A190W",3
"lib1","SARS-CoV-2","GGTAATTAATACTCAT",1,33.46,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D59A T140C L183A",3
"lib1","SARS-CoV-2","GGTAATTACTAAATAA",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T S113I T148K",3
"lib1","SARS-CoV-2","GGTAATTATACAGGGG",1,14.54,10.21,-0.55,0.11,2.86,1,0.01,"1 nonsynonymous","F167Y",1
"lib1","SARS-CoV-2","GGTAATTATCACCGTG",1,12.54,6.03,-4.74,1.07,1.5,1.18,0.04,">1 nonsynonymous","R25T A33H N92Y G174A",4
"lib1","SARS-CoV-2","GGTAATTGTCTACCCA",3,6.06,9.75,-1.02,0.14,2.69,1.1,0.01,">1 nonsynonymous","E10L P54S C61I",3
"lib1","SARS-CoV-2","GGTAATTTAAACTGCG",1,6.95,6.68,-4.09,0.58,1.5,1.14,0.06,">1 nonsynonymous","F17Q K56Y E141S",3
"lib1","SARS-CoV-2","GGTACAAAAAAAATTT",4,6.13,7.5,-3.27,0.17,1.52,1.05,0,">1 nonsynonymous","W106K G174V",2
"lib1","SARS-CoV-2","GGTACAAAGAATTGCT",4,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y F44V N107S E141N E154T",5
"lib1","SARS-CoV-2","GGTACAACCTATCCAT",1,16.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F70V D90R E141I",3
"lib1","SARS-CoV-2","GGTACAATATTAATCA",1,35.1,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T63G D90S T170M R179N",4
"lib1","SARS-CoV-2","GGTACAATTTATTATG",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P T15N R124Q",3
"lib1","SARS-CoV-2","GGTACACCCAGCCTAC",1,0.44,NA,NA,NA,NA,NA,NA,"stop","D59* V77W I104S D112Y P149W F167L",6
"lib1","SARS-CoV-2","GGTACACGAGTTCGCT",6,121.35,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28Y V32L E76V P96D",4
"lib1","SARS-CoV-2","GGTACACTAAATAAGT",5,39.99,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G86H G146V",2
"lib1","SARS-CoV-2","GGTACACTGCAGTCAA",8,30.49,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G101A Y121S",2
"lib1","SARS-CoV-2","GGTACAGAACCTAAGT",3,29.33,10.69,-0.07,0.05,2.93,1.06,0,"1 nonsynonymous","C195L",1
"lib1","SARS-CoV-2","GGTACAGAATGCCTCA",12,342.67,8.82,-1.94,0.07,2.68,1.11,0,">1 nonsynonymous","G116E N151R Q163W T170N",4
"lib1","SARS-CoV-2","GGTACAGACACCGTTG",1,14.15,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","V77H D98T Y119L G166T",4
"lib1","SARS-CoV-2","GGTACAGATGTCAAGT",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I N24H T63M S129Y E154M",5
"lib1","SARS-CoV-2","GGTACAGGGTTATCGC",4,54.54,8.79,-1.98,0.21,1.66,1.16,0.02,">1 nonsynonymous","S43M Y165E",2
"lib1","SARS-CoV-2","GGTACAGTCCATTGAA",2,72.22,7.18,-3.59,0.4,1.5,1.25,0.04,">1 nonsynonymous","N110L Y143W N157L",3
"lib1","SARS-CoV-2","GGTACATAATTAAACA",1,27.11,10.18,-0.59,0.13,2.48,1,0.01,">1 nonsynonymous","L57Y Y121F",2
"lib1","SARS-CoV-2","GGTACATGTATCTCAT",3,40.37,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V77W G86M N110Y I138V",4
"lib1","SARS-CoV-2","GGTACCAAGCGCTTAA",3,62.02,10.83,0.06,0.08,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTACCAATAAGACAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","L95E K132S C195*",3
"lib1","SARS-CoV-2","GGTACCCCAGCGCACT",6,42.91,6,-4.76,2,2.32,1.14,0,">1 nonsynonymous","L5F Y35V N64A I80R",4
"lib1","SARS-CoV-2","GGTACCCTCACATAGG",9,54.78,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S41A G86N Y143W F156W",4
"lib1","SARS-CoV-2","GGTACCGGACATTAAC",5,89.11,8.39,-2.37,0.11,2.33,1.08,0,">1 nonsynonymous","R73I F156L",2
"lib1","SARS-CoV-2","GGTACCTAGTCCAACA",2,16.41,7.52,-3.24,0.41,1.5,1,0.06,">1 nonsynonymous","L5R I88K",2
"lib1","SARS-CoV-2","GGTACCTCTTTATTTA",1,4.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V32F",1
"lib1","SARS-CoV-2","GGTACCTTAGCAAGAT",10,110.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K87N Y91H D112T G146N S164R",5
"lib1","SARS-CoV-2","GGTACGAGGCTCTACC",5,119.94,10.29,-0.48,0.05,2.68,1.03,0,">1 nonsynonymous","S43R I88M T201L",3
"lib1","SARS-CoV-2","GGTACGCAACGACTGG",12,1.05,NA,NA,NA,NA,NA,NA,"stop","C6G F12C A22W F44E D98L Y119*",6
"lib1","SARS-CoV-2","GGTACGGTCATATGGA",12,39.93,6.02,-4.74,1.09,1.5,1.2,0.02,">1 nonsynonymous","A14S F70I P82I C102Y Q144Y",5
"lib1","SARS-CoV-2","GGTACGTATCATCTGG",2,29.58,6.9,-3.86,0.41,1.5,1.07,0.03,">1 nonsynonymous","C150L F160T",2
"lib1","SARS-CoV-2","GGTACGTATTCATACC",4,71.37,10.16,-0.61,0.04,2.84,1.01,0,">1 nonsynonymous","E10P N30G P149S V153L",4
"lib1","SARS-CoV-2","GGTACGTTGGGACTCC",6,78.67,9.66,-1.1,0.14,1.8,1.09,0.01,">1 nonsynonymous","A67G Q163T",2
"lib1","SARS-CoV-2","GGTACTAAACATTCCT",5,72.83,10.23,-0.53,0.07,2.91,1.08,0,">1 nonsynonymous","S41D F62L K87I P149R",4
"lib1","SARS-CoV-2","GGTACTAAATTAAACG",5,0,NA,NA,NA,NA,NA,NA,"stop","N30V V37A G101Y D137*",4
"lib1","SARS-CoV-2","GGTACTAACTCTGAAA",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Q D98Y",2
"lib1","SARS-CoV-2","GGTACTAAGACCTCCC",3,45.92,10.75,-0.01,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTACTAATGCGGCGC",2,55.16,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","D34A T63N Y119A R136N",4
"lib1","SARS-CoV-2","GGTACTATAGAAATTC",2,36.67,10.85,0.08,0.07,2.95,1.03,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","GGTACTCACCCTAAAT",31,507.14,8.69,-2.07,0.08,2.87,1.07,0,"1 nonsynonymous","G166F",1
"lib1","SARS-CoV-2","GGTACTCACGCTCCAA",2,9.67,6.52,-4.24,0.62,1.54,1.1,0.03,">1 nonsynonymous","W106R G117A R136A S147R",4
"lib1","SARS-CoV-2","GGTACTCTAGACTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36R A42S D90H Y123H V153S",5
"lib1","SARS-CoV-2","GGTACTCTCTGCTAGT",2,8.22,NA,NA,NA,NA,NA,NA,"stop","Y50D R136K G146V L187*",4
"lib1","SARS-CoV-2","GGTACTCTGTACCGAA",4,95.67,10.67,-0.1,0.04,2.95,1.02,0,">1 nonsynonymous","V11L F62W",2
"lib1","SARS-CoV-2","GGTACTGCAATGAGGC",1,35.18,9.95,-0.82,0.1,2.43,1.06,0,">1 nonsynonymous","T3E G9R D90F",3
"lib1","SARS-CoV-2","GGTACTGGAAAGTCGC",1,50.44,9.91,-0.85,0.09,2.66,1.08,0,">1 nonsynonymous","C6W K87F",2
"lib1","SARS-CoV-2","GGTACTGGACCAAGTC",4,13.01,6.13,-4.63,1.32,1.5,1.24,0.03,">1 nonsynonymous","N13F K87G N107S",3
"lib1","SARS-CoV-2","GGTACTTAAAACAAAC",8,78.5,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","F12S W106R E154Q K198R",4
"lib1","SARS-CoV-2","GGTACTTCCCTAATAC",2,3.69,NA,NA,NA,NA,NA,NA,"stop","L38P Y175*",2
"lib1","SARS-CoV-2","GGTACTTGGTAGAACG",2,60.85,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G117K Y143R T148K",3
"lib1","SARS-CoV-2","GGTAGAAAAAAACTCA",15,55.07,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F17C S41C A105D",3
"lib1","SARS-CoV-2","GGTAGAAAAATGTAAC",3,2.85,NA,NA,NA,NA,NA,NA,"stop","A18*",1
"lib1","SARS-CoV-2","GGTAGAAAGCAATGGA",3,31.56,9.62,-1.14,0.18,1.75,1.03,0.01,">1 nonsynonymous","A42S W106V V115L K128Y",4
"lib1","SARS-CoV-2","GGTAGAAAGTCAATCA",3,26.22,6.8,-3.97,0.48,1.5,1.07,0.06,">1 nonsynonymous","A89S C158F",2
"lib1","SARS-CoV-2","GGTAGAAATATGGCCA",13,151.61,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P82L P149G G155F",3
"lib1","SARS-CoV-2","GGTAGAAATCCACAAC",2,5.91,10.71,-0.06,0.16,2.83,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGTAGAAATTATCTGG",5,33.43,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y21L L131S",2
"lib1","SARS-CoV-2","GGTAGAAATTTTAGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","Q163S A192* T201Q",3
"lib1","SARS-CoV-2","GGTAGAACAAACACGC",3,97.86,10.7,-0.06,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAGAACAAATTGAG",3,53.7,10.82,0.05,0.05,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTAGAACAGGGCTAG",5,0.12,NA,NA,NA,NA,NA,NA,"stop","N1H W106* L122P N151I S184D",5
"lib1","SARS-CoV-2","GGTAGAACTCTTCTAA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V Q163D V182H",3
"lib1","SARS-CoV-2","GGTAGAAGAAAGTACC",1,1.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","GGTAGAAGTTAGAGCT",3,21.82,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3A V37W L95H V173E T201V",5
"lib1","SARS-CoV-2","GGTAGACATGCTAGAC",2,35.09,10.42,-0.34,0.08,2.9,1,0,">1 nonsynonymous","I28V S139K",2
"lib1","SARS-CoV-2","GGTAGACATGTGATTA",2,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A42I V52N G152I Q176S",5
"lib1","SARS-CoV-2","GGTAGACCTTAAATTT",2,10.39,10.55,-0.22,0.09,2.91,1.04,0.01,">1 nonsynonymous","D97L F160D",2
"lib1","SARS-CoV-2","GGTAGACTCTATTAAT",1,6.26,10.03,-0.74,0.32,1.74,1.1,0.05,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","GGTAGAGACTTCAATG",3,1.11,NA,NA,NA,NA,NA,NA,"stop","C102I R179G S184*",3
"lib1","SARS-CoV-2","GGTAGAGGATTAGTGA",6,63.59,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N13V F44T D90P Y178V",4
"lib1","SARS-CoV-2","GGTAGATCACCAGAAT",5,64.16,10.57,-0.19,0.05,2.9,1.04,0,">1 nonsynonymous","D98G F160N",2
"lib1","SARS-CoV-2","GGTAGATGTCCAATAG",6,31.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48G L57E G86S R127C E141S",5
"lib1","SARS-CoV-2","GGTAGATTATTCGGTC",2,211.38,9.88,-0.88,0.05,2.78,1.05,0,">1 nonsynonymous","S43Q Q176L",2
"lib1","SARS-CoV-2","GGTAGCACACACAAGT",21,60.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4L N13H C61Y A89G A105D I142T",6
"lib1","SARS-CoV-2","GGTAGCACGACCCATT",3,57.69,10.76,0,0.04,2.94,1.02,0,"1 nonsynonymous","K56N",1
"lib1","SARS-CoV-2","GGTAGCATAAACAATG",5,65.25,9.64,-1.13,0.04,2.88,1.05,0,">1 nonsynonymous","I2A Y119N A190T",3
"lib1","SARS-CoV-2","GGTAGCCACCTTCACG",2,8.3,6,-4.76,2,3,1.18,0,">1 nonsynonymous","A42V V52N P96H K198L",4
"lib1","SARS-CoV-2","GGTAGCCATTCCCTGC",4,31.34,9.88,-0.89,0.11,1.93,1.04,0.01,">1 nonsynonymous","D90G S184F",2
"lib1","SARS-CoV-2","GGTAGCCCCGCAGATT",8,1.28,NA,NA,NA,NA,NA,NA,"stop","A145* A192Q",2
"lib1","SARS-CoV-2","GGTAGCCTGTGGTTGC",2,16.59,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","I28M G86H E141I S147Y R179I S200Y",6
"lib1","SARS-CoV-2","GGTAGCGATAAGATGT",9,3.21,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib1","SARS-CoV-2","GGTAGCGTGATGCATA",8,114.11,10.47,-0.29,0.04,2.88,1.03,0,">1 nonsynonymous","N30C V37R",2
"lib1","SARS-CoV-2","GGTAGCGTTAGTGAGA",3,36.53,10.71,-0.06,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTAGCTACAAGAAGG",9,35.4,8.9,-1.86,0.07,2.9,1.05,0,">1 nonsynonymous","I2T V37I Y119I A145G",4
"lib1","SARS-CoV-2","GGTAGCTATTGCCGCG",9,162.26,10.55,-0.22,0.04,2.88,1.03,0,">1 nonsynonymous","G9Q S45T D59S K114I",4
"lib1","SARS-CoV-2","GGTAGCTCATACTTTC",11,17.07,6,-4.76,2,3,1.1,0,">1 nonsynonymous","G51K D59R D68K G83M Y93N",5
"lib1","SARS-CoV-2","GGTAGCTCGAGGTAGA",2,34.46,6,-4.76,0.55,1.5,1.07,0,">1 nonsynonymous","G9T S129I C150M",3
"lib1","SARS-CoV-2","GGTAGCTCTCTAAAAA",6,72.59,10.13,-0.63,0.06,2.82,1.01,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","GGTAGCTTAAGACTCG",6,47.76,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","F12D N118C S129R",3
"lib1","SARS-CoV-2","GGTAGCTTTACGTTAG",2,61.68,10.73,-0.04,0.04,2.93,1.02,0,"1 nonsynonymous","P149G",1
"lib1","SARS-CoV-2","GGTAGGAAGATGGCCG",1,24.57,10.59,-0.17,0.12,2.75,1.23,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GGTAGGAATGCCGTTA",6,0.48,NA,NA,NA,NA,NA,NA,"stop","I2* P96T T100Y P133Y",4
"lib1","SARS-CoV-2","GGTAGGACCCTAGACC",9,135.26,10.37,-0.4,0.04,2.87,1.05,0,"1 nonsynonymous","G174F",1
"lib1","SARS-CoV-2","GGTAGGCAGATGTGGT",1,26.38,6,-4.76,2,2.65,1.14,0,">1 nonsynonymous","C6P K48P",2
"lib1","SARS-CoV-2","GGTAGGCCGAAAAGAA",4,11.4,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T3Y S19V K87A",3
"lib1","SARS-CoV-2","GGTAGGCTCATCATTA",3,38.73,10.22,-0.54,0.09,2.62,1,0,">1 nonsynonymous","G83W A192S",2
"lib1","SARS-CoV-2","GGTAGGGTATGGTGTT",1,19.67,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G101A Q163K",2
"lib1","SARS-CoV-2","GGTAGGTAAAACTACT",8,2.78,NA,NA,NA,NA,NA,NA,"stop","L5S F12R S41V N107* Y119I",5
"lib1","SARS-CoV-2","GGTAGTAAAAGTTTGC",3,27.37,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A42T I88V A105Y G117S",4
"lib1","SARS-CoV-2","GGTAGTACGTGCTCAG",1,45.6,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I28E Q84E L131R",3
"lib1","SARS-CoV-2","GGTAGTCAATAACTGA",4,175.59,7.71,-3.05,0.14,1.58,1.19,0.01,">1 nonsynonymous","F134D F167Y A192E K199C",4
"lib1","SARS-CoV-2","GGTAGTCATACGCATT",2,27.45,9.05,-1.72,0.08,2.93,1.07,0,">1 nonsynonymous","R16K N64D N157S",3
"lib1","SARS-CoV-2","GGTAGTGACGGGTACA",5,53.02,10.77,0.01,0.05,2.95,1.01,0,">1 nonsynonymous","T55D F160L",2
"lib1","SARS-CoV-2","GGTAGTGTGAAAGCGG",8,13.48,10.04,-0.72,0.11,2.9,1,0,">1 nonsynonymous","A14P S113P",2
"lib1","SARS-CoV-2","GGTAGTTACTCCAATT",1,11.07,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","L5A G86W F99N S139N",4
"lib1","SARS-CoV-2","GGTAGTTAGCCTTTGA",2,51.04,9.76,-1,0.06,2.18,1.12,0,">1 nonsynonymous","A81T G116R",2
"lib1","SARS-CoV-2","GGTAGTTCATGTGGGC",1,19.32,9.45,-1.31,0.4,1.5,1,0.06,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","GGTAGTTCTAAACTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50S F70K L122*",3
"lib1","SARS-CoV-2","GGTATAAAAACTAAAG",1,9.9,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F8S S41G A105K",3
"lib1","SARS-CoV-2","GGTATAAAAGAACCAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128R",1
"lib1","SARS-CoV-2","GGTATAAAATTAACTC",4,41.77,10.7,-0.06,0.04,2.95,1.01,0,"1 nonsynonymous","P149G",1
"lib1","SARS-CoV-2","GGTATAAAGCCTAACC",4,114.16,10.7,-0.07,0.05,2.9,1.06,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","GGTATAAATAAGATAA",2,61.01,10.15,-0.62,0.11,2.16,1.02,0,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","GGTATAAATGAATTCT",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C G74M N171L R179F S200Y",5
"lib1","SARS-CoV-2","GGTATAATAATAGAAA",1,44.52,9.79,-0.98,0.09,2.06,1.07,0,">1 nonsynonymous","Y35D K128R G155K",3
"lib1","SARS-CoV-2","GGTATAATCAAGGCGT",2,19.53,9.95,-0.82,0.1,2.93,1,0,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","GGTATAATGACTAAAA",10,444.2,6,-4.76,1.27,1.5,1.13,0,">1 nonsynonymous","F44K Y121G G152N G166R Q176V",5
"lib1","SARS-CoV-2","GGTATAATTCAACAGG",5,0.82,NA,NA,NA,NA,NA,NA,"stop","T55S R78F G83L Y121F T170I K198*",6
"lib1","SARS-CoV-2","GGTATACAAAACTTAA",3,48.55,10.61,-0.15,0.07,2.9,1,0,">1 nonsynonymous","D98P I142M",2
"lib1","SARS-CoV-2","GGTATACACTACCATA",3,99.13,10.49,-0.27,0.05,2.84,1.1,0,">1 nonsynonymous","A22E V32W V173H K198R",4
"lib1","SARS-CoV-2","GGTATACCTATAGGCA",4,6.49,7.24,-3.52,0.26,3,1.08,0.01,">1 nonsynonymous","A81E T85P R124F Y178H",4
"lib1","SARS-CoV-2","GGTATACTAAGTATCC",3,2.13,NA,NA,NA,NA,NA,NA,"stop","R136* F160S",2
"lib1","SARS-CoV-2","GGTATAGCAAGAGAAT",3,33.53,10.64,-0.13,0.1,2.88,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","GGTATAGCACTTAAGA",26,412.64,10.06,-0.7,0.03,2.92,1.01,0,">1 nonsynonymous","Y91L L131I F156L A190S",4
"lib1","SARS-CoV-2","GGTATAGGAATTAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L Y91G Y178S",3
"lib1","SARS-CoV-2","GGTATAGGTACTTACC",2,0.5,NA,NA,NA,NA,NA,NA,"stop","V11H C61V P82Q T85M T140H G174* T201G",7
"lib1","SARS-CoV-2","GGTATAGGTATGACAT",5,41.22,10.65,-0.12,0.03,2.93,1.02,0,">1 nonsynonymous","G116S P169T",2
"lib1","SARS-CoV-2","GGTATATACTCAAGTA",3,18.74,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","N13Y S36R N58T F70S G83E L122S A192S",7
"lib1","SARS-CoV-2","GGTATATAGGTCACCC",7,65.81,9.86,-0.9,0.13,2.04,1.07,0.01,">1 nonsynonymous","S41I L95C",2
"lib1","SARS-CoV-2","GGTATATATGTTTTTC",11,64.69,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F44I C49D F99N Y143N",4
"lib1","SARS-CoV-2","GGTATATCAACGTATT",1,30.07,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","D59C A105R T140R C158L Y178C",5
"lib1","SARS-CoV-2","GGTATATGCTGATAAA",1,111.14,6.04,-4.72,0.85,1.5,1.13,0.01,">1 nonsynonymous","D59N Y119E F126A I138P",4
"lib1","SARS-CoV-2","GGTATCAAAACACCCC",2,38.23,10.82,0.06,0.06,2.98,1,0,"1 nonsynonymous","P54L",1
"lib1","SARS-CoV-2","GGTATCAACCGTACCT",2,61.7,8.45,-2.32,0.12,2.83,1.06,0.01,">1 nonsynonymous","P54M A81G Y159L",3
"lib1","SARS-CoV-2","GGTATCAACGTGCTGT",4,68.79,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23V Q176S",2
"lib1","SARS-CoV-2","GGTATCACGAGTTATG",1,20.59,9.43,-1.33,0.22,1.65,1.02,0.02,">1 nonsynonymous","D90V P169I",2
"lib1","SARS-CoV-2","GGTATCCAGCGGTCCT",13,183.73,10.78,0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTATCCATTTTCTTC",2,17.31,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2E G9V G51I D90S Y119S",5
"lib1","SARS-CoV-2","GGTATCCCCAAGTACA",10,114.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y21P V65F K94T R136T V173K",5
"lib1","SARS-CoV-2","GGTATCGAAAAGATAT",2,21.63,6,-4.76,2,3,1.08,0,"1 nonsynonymous","F99D",1
"lib1","SARS-CoV-2","GGTATCGCGGTGTCAC",3,108.04,9.31,-1.46,0.09,2.33,1.09,0,">1 nonsynonymous","Y91R G174R",2
"lib1","SARS-CoV-2","GGTATCTACAATCAGG",2,0.42,NA,NA,NA,NA,NA,NA,"stop","L60T L95F Y119S F156Y K199*",5
"lib1","SARS-CoV-2","GGTATCTATTGAATCT",2,46.55,9.81,-0.95,0.14,1.91,1.06,0.01,">1 nonsynonymous","K48H D90M Y123L",3
"lib1","SARS-CoV-2","GGTATCTCCAGAGCTT",3,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R I88M N118H R127N Y165K",5
"lib1","SARS-CoV-2","GGTATCTCTGGTAGGC",4,95.67,10.54,-0.23,0.06,2.93,1.02,0,">1 nonsynonymous","I2L G116L",2
"lib1","SARS-CoV-2","GGTATCTGAAACTTCC",3,46.52,10.77,0,0.1,2.86,1.06,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","GGTATGAAAAGACAGG",2,45.71,9.62,-1.15,0.05,2.8,1.1,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","GGTATGAAACCTTTCC",8,27.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5W A42S G86T L122V",4
"lib1","SARS-CoV-2","GGTATGAATGATATAG",5,65.37,8.55,-2.22,0.11,2.69,1.12,0.01,">1 nonsynonymous","Y143T P149K K198T",3
"lib1","SARS-CoV-2","GGTATGAATTAGCAAC",4,94.88,10.85,0.09,0.05,2.88,1.08,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","GGTATGACCAAATGCT",2,22.14,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","V32A C49K R124Q T148V",4
"lib1","SARS-CoV-2","GGTATGAGACAACACC",3,65.64,10.84,0.08,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTATGATCCAACCTA",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74Y L122Q Y143K T201E",4
"lib1","SARS-CoV-2","GGTATGCACTCAATCT",3,44.7,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F62S I88G K94E F160P G166D",5
"lib1","SARS-CoV-2","GGTATGCAGACCTTTT",6,58.5,9.84,-0.92,0.12,1.91,1.11,0,">1 nonsynonymous","I104H I138Q K199E",3
"lib1","SARS-CoV-2","GGTATGCAGCTTATAA",7,25.44,9.31,-1.46,0.29,1.5,1.14,0.04,">1 nonsynonymous","D34V A42G G83K D97T",4
"lib1","SARS-CoV-2","GGTATGCGGGGATAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G51R K87*",2
"lib1","SARS-CoV-2","GGTATGCGTTTACCCT",2,58.29,8.43,-2.33,0.25,1.5,1.15,0.04,">1 nonsynonymous","I2G G9Q W23E",3
"lib1","SARS-CoV-2","GGTATGGCCACGGGTG",1,32.34,7.05,-3.71,0.48,1.5,1.21,0.05,"1 nonsynonymous","P161I",1
"lib1","SARS-CoV-2","GGTATGGCCGCCAATA",1,16.44,9.48,-1.29,0.23,2.11,1.18,0.03,">1 nonsynonymous","C102R N107M",2
"lib1","SARS-CoV-2","GGTATGTAATCGGACT",4,24.56,8.84,-1.93,0.1,2.7,1.12,0.01,">1 nonsynonymous","I2T S113M",2
"lib1","SARS-CoV-2","GGTATGTCGTAGTACT",6,78.48,6,-4.76,2,3,1.16,0,">1 nonsynonymous","A22R P82L G116L Y143N Y165C",5
"lib1","SARS-CoV-2","GGTATGTTATAGATAT",11,3.17,NA,NA,NA,NA,NA,NA,"stop","S19T V180*",2
"lib1","SARS-CoV-2","GGTATTAAAAGACGGC",4,51.51,10.35,-0.41,0.04,2.88,1.08,0,">1 nonsynonymous","V32T A145M",2
"lib1","SARS-CoV-2","GGTATTAATTTAGAGG",2,15.34,8.59,-2.17,0.31,1.5,1.03,0.07,">1 nonsynonymous","F17A Y121N",2
"lib1","SARS-CoV-2","GGTATTACAGAGGGTA",2,26.88,10.79,0.02,0.04,2.92,1.03,0,">1 nonsynonymous","G83C S184H",2
"lib1","SARS-CoV-2","GGTATTACGACAACCC",1,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Q S129T N171K",3
"lib1","SARS-CoV-2","GGTATTACTGATGAAT",8,40.28,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","Y35V P96M A105T E135P P191A",5
"lib1","SARS-CoV-2","GGTATTAGCCGGACCG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","T3F K56D C61F D97R Q163* G172W",6
"lib1","SARS-CoV-2","GGTATTAGTTTGGAGC",3,9.75,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F8M Y66G S139A G146R Y165P G174L",6
"lib1","SARS-CoV-2","GGTATTCAACCCTAAT",9,132.13,10.67,-0.09,0.05,2.96,1,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","GGTATTCGTTTTTATA",9,126.49,7.36,-3.41,0.22,1.5,1.15,0.01,">1 nonsynonymous","K48H N110Q G117V L162V",4
"lib1","SARS-CoV-2","GGTATTGAAGAAAAAA",3,17.58,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Y123C Y143N",2
"lib1","SARS-CoV-2","GGTATTGCAAAATAGT",2,13.71,9.12,-1.65,0.14,1.88,1.22,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","GGTATTGCCCGCAGGA",6,0.69,NA,NA,NA,NA,NA,NA,"stop","Y121* N130R K198D",3
"lib1","SARS-CoV-2","GGTATTGTAACAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F99* D137I S184L",3
"lib1","SARS-CoV-2","GGTATTTGATTACCTT",3,9.58,6.09,-4.67,0.75,1.5,1.1,0.03,">1 nonsynonymous","G101L E141T G146Y R179G",4
"lib1","SARS-CoV-2","GGTATTTTGTAGGGTT",2,17.82,10.02,-0.74,0.12,2.09,1,0.01,">1 nonsynonymous","I72T D90S",2
"lib1","SARS-CoV-2","GGTATTTTTGCATAGC",1,90.75,10.14,-0.62,0.05,2.84,1.02,0,">1 nonsynonymous","V32I A105M",2
"lib1","SARS-CoV-2","GGTCAAAAAAATGAGC",1,0.25,NA,NA,NA,NA,NA,NA,"stop","L95* Y123E",2
"lib1","SARS-CoV-2","GGTCAAAAACTAAGGT",5,0.2,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","GGTCAAAAATTAGACC",6,71.71,6.15,-4.61,0.84,1.5,1.16,0.02,">1 nonsynonymous","G51R G86P Y143L G155W Y178S",5
"lib1","SARS-CoV-2","GGTCAAACAAGCGCGG",1,10.36,10.12,-0.64,0.23,2.55,1,0.01,">1 nonsynonymous","F8M S45Q N64K K128G",4
"lib1","SARS-CoV-2","GGTCAAACAGTTAAGT",4,66.44,9.86,-0.9,0.1,2.43,1.09,0,">1 nonsynonymous","T3L S29I S147C",3
"lib1","SARS-CoV-2","GGTCAAACGGTTGTTG",9,29.66,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N58T N107I Y119S",3
"lib1","SARS-CoV-2","GGTCAAACTAATTCAG",8,94.33,10.77,0,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCAAACTCTAAAAA",5,2.16,NA,NA,NA,NA,NA,NA,"stop","F99G Y119L Y143*",3
"lib1","SARS-CoV-2","GGTCAAAGCCAACGCG",6,26.35,9.15,-1.61,0.17,1.85,1.15,0.01,">1 nonsynonymous","C31S S184D",2
"lib1","SARS-CoV-2","GGTCAAAGGAGTAGAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","F70R E76* Q84R D97P G152D",5
"lib1","SARS-CoV-2","GGTCAAAGTGACCACC",3,37.2,9.71,-1.05,0.13,1.74,1.12,0.01,">1 nonsynonymous","D59G Y91F W106A",3
"lib1","SARS-CoV-2","GGTCAAATAATAAATA",11,190.54,8.11,-2.66,0.14,2.14,1.16,0.01,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","GGTCAAATCAGGGGTA",5,263.74,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T63D R78A D90N P96Q T100H N109I F156R",7
"lib1","SARS-CoV-2","GGTCAAATTATCTTAT",3,67.67,10.78,0.01,0.07,2.9,1.04,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","GGTCAACAATTAATGA",5,58.07,9.08,-1.68,0.13,1.63,1.15,0.01,">1 nonsynonymous","N40W R136F",2
"lib1","SARS-CoV-2","GGTCAACCACATTCGT",10,190.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16S I28Q Y178S",3
"lib1","SARS-CoV-2","GGTCAACCATAGGTTG",3,28.3,10.48,-0.28,0.07,2.9,1.03,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","GGTCAACGAGAAATAA",9,267.11,9.47,-1.29,0.07,2.81,1.12,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","GGTCAACTCACGCTCC",14,148.06,10.18,-0.59,0.07,2.72,1,0,">1 nonsynonymous","D90N F134E Q168S",3
"lib1","SARS-CoV-2","GGTCAAGAACCCATAC",7,108.77,10.76,0,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCAAGAGCTGGGCA",5,85.7,8.57,-2.19,0.38,1.5,1,0.05,">1 nonsynonymous","L38P D68I",2
"lib1","SARS-CoV-2","GGTCAATAATTTTGGA",6,229.27,10.61,-0.16,0.03,2.94,1,0,">1 nonsynonymous","T148P H189S",2
"lib1","SARS-CoV-2","GGTCAATAGTATCCCT",2,38.21,9.4,-1.36,0.18,2.5,1.12,0.01,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","GGTCAATATTTCAAAC",1,19.36,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K94N N120C I138W Q144M T201L",5
"lib1","SARS-CoV-2","GGTCAATCTCTGTAAA",2,32.21,10.23,-0.54,0.09,2.77,1.05,0,">1 nonsynonymous","L5P I80M",2
"lib1","SARS-CoV-2","GGTCAATGAGATACAA",5,40.04,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14K F99C N107Y E154R",4
"lib1","SARS-CoV-2","GGTCACAAATCGACCA",2,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K D68R T201S",3
"lib1","SARS-CoV-2","GGTCACAACGACGGGA",6,96.11,10.43,-0.34,0.05,2.82,1.04,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","GGTCACACAATATTGA",3,58.11,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L38G T85P W106S",3
"lib1","SARS-CoV-2","GGTCACACCTCAAACA",4,125.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T100L I142G Q176V",3
"lib1","SARS-CoV-2","GGTCACACTTGAAACG",1,17.18,9.26,-1.51,0.11,2.88,1.12,0,"1 nonsynonymous","N120P",1
"lib1","SARS-CoV-2","GGTCACCAAGGCTTGA",3,24.33,6,-4.76,1.17,3,1.16,0.01,"1 nonsynonymous","C158G",1
"lib1","SARS-CoV-2","GGTCACCAATTAGGCT",7,13.05,9.98,-0.79,0.08,2.9,1,0,"1 nonsynonymous","F156N",1
"lib1","SARS-CoV-2","GGTCACCCGTGGAAAC",4,38.55,10.7,-0.07,0.06,2.98,1.01,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","GGTCACGTATGAACAG",7,61.58,6.73,-4.04,0.24,1.5,1.14,0.01,">1 nonsynonymous","G86C G155D",2
"lib1","SARS-CoV-2","GGTCACGTCCGAAAAC",7,108.59,10.08,-0.68,0.05,2.76,1.03,0,"1 nonsynonymous","N107R",1
"lib1","SARS-CoV-2","GGTCACTGATTTTCAA",1,21.24,10.56,-0.2,0.09,2.93,1.01,0.01,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","GGTCACTTATTGTGTA",8,4.12,NA,NA,NA,NA,NA,NA,"stop","G9V P82* G152Y Y165K",4
"lib1","SARS-CoV-2","GGTCAGAGGCACATAT",2,65.2,10.75,-0.01,0.07,2.82,1.07,0,"1 nonsynonymous","N130V",1
"lib1","SARS-CoV-2","GGTCAGATTAAGGGAG",1,58.23,10.57,-0.2,0.05,2.91,1.06,0,">1 nonsynonymous","T85R V103I",2
"lib1","SARS-CoV-2","GGTCAGATTTGAAAAC",3,8.7,9.77,-0.99,0.12,1.85,1.08,0.01,">1 nonsynonymous","T3M C49F V77L",3
"lib1","SARS-CoV-2","GGTCAGCATTTCTCGA",1,15.49,8.47,-2.29,0.18,1.87,1.13,0.02,">1 nonsynonymous","Y159I T170K",2
"lib1","SARS-CoV-2","GGTCAGCTTAATATAC",2,103.72,10.68,-0.09,0.07,2.96,1,0,">1 nonsynonymous","L5N G152M",2
"lib1","SARS-CoV-2","GGTCAGCTTGAATATT",4,126.34,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4V V37I F44A K56D G83V K87Y G146E",7
"lib1","SARS-CoV-2","GGTCAGGGACATATCA",5,160.19,10.74,-0.02,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCAGTATTCCACCA",11,93.41,6,-4.76,1.77,1.5,1.19,0.01,">1 nonsynonymous","K87A C102T Y119E",3
"lib1","SARS-CoV-2","GGTCAGTCTTTATAAC",5,72.24,10.28,-0.49,0.09,2.57,1.05,0,">1 nonsynonymous","T3V Y39W D90K H189V",4
"lib1","SARS-CoV-2","GGTCAGTGTTTATTAG",2,0.96,NA,NA,NA,NA,NA,NA,"stop","S19Y N24S Y91T I138* Y165V",5
"lib1","SARS-CoV-2","GGTCATAAAAGTCCCG",7,96.49,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P7N G86H L122M T170E V181M",5
"lib1","SARS-CoV-2","GGTCATACTCGACTTC",4,228.82,8.96,-1.81,0.08,2.05,1.12,0,">1 nonsynonymous","P149K Q176R",2
"lib1","SARS-CoV-2","GGTCATAGAACGGGCT",2,6.02,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","G86I F160P",2
"lib1","SARS-CoV-2","GGTCATAGCTCTACAA",1,45.77,8.57,-2.19,0.22,1.83,1.13,0.02,"1 nonsynonymous","Y121G",1
"lib1","SARS-CoV-2","GGTCATATCCTCTTCG",3,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Y A42L D97R V103Y N130A I138M",6
"lib1","SARS-CoV-2","GGTCATATCTATCAAA",3,8.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V77G D90N G117L S139L T201R",5
"lib1","SARS-CoV-2","GGTCATATGACAAAGA",1,27.33,6.57,-4.19,0.43,1.5,1.26,0.02,">1 nonsynonymous","N40F T46F Y91M G116M",4
"lib1","SARS-CoV-2","GGTCATCCTTATAAAT",7,81.61,9.72,-1.05,0.12,2.44,1.03,0,">1 nonsynonymous","N1I Y121I N151Y",3
"lib1","SARS-CoV-2","GGTCATGAAACACGTT",7,260.7,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","P177L",1
"lib1","SARS-CoV-2","GGTCATGAGGTGTACG",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L A89N S129R",3
"lib1","SARS-CoV-2","GGTCATGGAAGCACAT",7,111.15,9.88,-0.88,0.09,2.04,1.06,0,">1 nonsynonymous","F99L H189L",2
"lib1","SARS-CoV-2","GGTCATTACACCATAT",4,151.37,10.78,0.01,0.05,2.89,1.05,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","GGTCATTGTGACTTAT",2,84.24,10.34,-0.42,0.07,2.82,1,0,">1 nonsynonymous","T15M I104L L188K P191Y",4
"lib1","SARS-CoV-2","GGTCATTTATAGATAC",2,59.92,10.2,-0.56,0.1,2.71,1,0,">1 nonsynonymous","E10H I28L F134N",3
"lib1","SARS-CoV-2","GGTCCAAAGGGATTAT",2,49.18,10.81,0.05,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCCAAGGCCCTTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib1","SARS-CoV-2","GGTCCAATACTAACAA",6,110.24,6.06,-4.71,0.84,1.5,1.18,0.01,">1 nonsynonymous","S19K Y165M",2
"lib1","SARS-CoV-2","GGTCCAATTTACAAAC",1,27.01,10.03,-0.73,0.09,2.87,1.02,0.01,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","GGTCCACCACATAAAT",12,110.82,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","W106P N151S",2
"lib1","SARS-CoV-2","GGTCCACGTACTTTCC",8,41.91,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y39E V77R A89R",3
"lib1","SARS-CoV-2","GGTCCAGAGAACCCTA",6,133.36,10.27,-0.49,0.04,2.87,1,0,">1 nonsynonymous","L5V F12L S41A L60T",4
"lib1","SARS-CoV-2","GGTCCAGCTTGTGAAA",7,31.08,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N64G I88G D98G T148N A190S",5
"lib1","SARS-CoV-2","GGTCCATAGGTTTATC",9,67.49,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12S F70K F99L S113N P133R G155T",6
"lib1","SARS-CoV-2","GGTCCATTGTAATAGG",13,51.15,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","V77W Y121G K128L",3
"lib1","SARS-CoV-2","GGTCCCAAATCTATGA",3,26.63,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5F C49S A67L K87A S108P V153R",6
"lib1","SARS-CoV-2","GGTCCCAACGTAACGC",18,195.38,9,-1.76,0.13,1.5,1.15,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","GGTCCCACAATCAGAT",9,16.28,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","E10N I72Y K87N E186V",4
"lib1","SARS-CoV-2","GGTCCCATCCTAAAAA",1,5.14,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A14K C49Y F167L",3
"lib1","SARS-CoV-2","GGTCCCCCGAAAACGC",5,87.66,10.09,-0.67,0.08,2.67,1.07,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","GGTCCCGCATTATAAA",3,22.32,9.17,-1.6,0.21,1.5,1,0.02,">1 nonsynonymous","F62S I88T",2
"lib1","SARS-CoV-2","GGTCCCGCCACATCCA",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D C102N R136P",3
"lib1","SARS-CoV-2","GGTCCCGTATGTGCTG",1,21.55,10.75,-0.02,0.09,2.82,1.12,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","GGTCCCTCTCTTAACA",14,53.68,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12R R27F D112F R179L",4
"lib1","SARS-CoV-2","GGTCCCTGCAACTATC",2,0,NA,NA,NA,NA,NA,NA,"stop","F8* K26L F62Y Y66H L122*",5
"lib1","SARS-CoV-2","GGTCCGACTACAGTCT",6,64.56,10.5,-0.26,0.05,2.86,1.04,0,"1 nonsynonymous","A105G",1
"lib1","SARS-CoV-2","GGTCCGATATTGACCG",1,28.83,10.89,0.12,0.12,2.97,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGTCCGCCTGCCCTAT",1,27.64,10.15,-0.61,0.08,2.17,1.02,0,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","GGTCCGGCCTGTTGAC",3,49.38,10.61,-0.16,0.05,2.93,1,0,">1 nonsynonymous","Y123W S200N",2
"lib1","SARS-CoV-2","GGTCCGTCTATCAACG",8,45.7,10.83,0.07,0.09,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCCGTCTGCCGTAC",12,136.61,8.66,-2.11,0.18,1.5,1.12,0.01,">1 nonsynonymous","Q84R A89K S147N",3
"lib1","SARS-CoV-2","GGTCCTAAAAACCTCA",1,9.06,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","D34K K87T N171S V181F",4
"lib1","SARS-CoV-2","GGTCCTAATTAATAAT",1,31.86,10.73,-0.03,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCCTCCATAAATTC",3,116.99,6.88,-3.88,0.43,1.5,1.16,0.03,">1 nonsynonymous","S113E F160S G166R",3
"lib1","SARS-CoV-2","GGTCCTCGGGATTTTC",6,45.58,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S19F W106E Y178C",3
"lib1","SARS-CoV-2","GGTCCTCTACCTACGT",1,29.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5D G9T I88S N120W",4
"lib1","SARS-CoV-2","GGTCGAACCCTAAGAT",1,20.52,8.76,-2,0.2,2.89,1.09,0.02,">1 nonsynonymous","G51N N157F",2
"lib1","SARS-CoV-2","GGTCGAATCTTAAATA",3,45.73,8.68,-2.09,0.11,3,1.02,0.01,">1 nonsynonymous","S129D G166D",2
"lib1","SARS-CoV-2","GGTCGACCAAGCTAAT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","N120S K128T K132Y F167* T201A",5
"lib1","SARS-CoV-2","GGTCGACCAATCAGAG",2,69.85,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","S19R K26Q D59L R78D T85N Y121V E141K Q176T",8
"lib1","SARS-CoV-2","GGTCGACTAATAATAC",5,14.25,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C49V D59R S69G D112L S139M",5
"lib1","SARS-CoV-2","GGTCGAGCCAGAAGAT",2,27.3,6.08,-4.68,1.34,1.5,1.21,0.06,">1 nonsynonymous","R78T N109M Y143M C150A",4
"lib1","SARS-CoV-2","GGTCGAGGGCCGAATT",17,272.71,10.74,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCGAGTTTGTTTTG",3,10.24,7.26,-3.51,0.17,1.65,1.07,0.01,">1 nonsynonymous","D112S T140S",2
"lib1","SARS-CoV-2","GGTCGCCCCACGTTTC",1,10.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V173C V182L",2
"lib1","SARS-CoV-2","GGTCGCCCTTAGTCCT",2,34.51,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","Y35S S41F C61I P161L K199N",5
"lib1","SARS-CoV-2","GGTCGCGAAAAAGCAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","C102V Y175*",2
"lib1","SARS-CoV-2","GGTCGCGCATCTGTTC",1,11.68,10.11,-0.65,0.12,2.45,1,0.01,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","GGTCGCTGCAACCAGA",3,30.79,8.97,-1.79,0.23,1.54,1.14,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","GGTCGGAGCCCAGAGG",4,39.41,10.73,-0.04,0.05,2.88,1.07,0,"1 nonsynonymous","L60G",1
"lib1","SARS-CoV-2","GGTCGGCACAATAAAA",5,39.01,9.87,-0.9,0.14,2.28,1.09,0.01,">1 nonsynonymous","I2S D34L T201G",3
"lib1","SARS-CoV-2","GGTCGGGGCAAAGACT",1,39.46,10.18,-0.59,0.27,2.49,1.07,0.04,">1 nonsynonymous","T85M G196E",2
"lib1","SARS-CoV-2","GGTCGGTTTTTTATGA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","Y39* P96F",2
"lib1","SARS-CoV-2","GGTCGTCTTAGTTCAT",7,49.98,8.61,-2.16,0.21,1.5,1.2,0.02,">1 nonsynonymous","D59N G83Q W106L",3
"lib1","SARS-CoV-2","GGTCGTTTATCATGAG",1,10.89,6,-4.76,2,3,1.05,0.02,">1 nonsynonymous","I2L C49G N92L",3
"lib1","SARS-CoV-2","GGTCTAAACAGGGTTA",5,111.21,10.7,-0.07,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCTAAACGAATAAT",1,13.33,9.56,-1.2,0.1,2.32,1.18,0.01,">1 nonsynonymous","T15C E154M",2
"lib1","SARS-CoV-2","GGTCTAAATCATAGAC",7,2.04,NA,NA,NA,NA,NA,NA,"stop","N4P C102*",2
"lib1","SARS-CoV-2","GGTCTAACTACAGCGA",2,23.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V77D S129Y D137V V173W",4
"lib1","SARS-CoV-2","GGTCTAAGTTCAGATC",4,26.59,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","R73Y N151L P161L T170N V181R",5
"lib1","SARS-CoV-2","GGTCTAATAAATACCT",2,18.75,9.24,-1.52,0.21,1.83,1.21,0.02,">1 nonsynonymous","A81L N151T",2
"lib1","SARS-CoV-2","GGTCTAATTTGTCGTA",1,15.94,6.16,-4.6,0.98,1.5,1.11,0.06,">1 nonsynonymous","C49H K94H D137P Q144A S200F",5
"lib1","SARS-CoV-2","GGTCTACAAATATTGA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","C61* T201M",2
"lib1","SARS-CoV-2","GGTCTACACTGGTCCA",14,113.87,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","A89W D137H Y178H",3
"lib1","SARS-CoV-2","GGTCTACATTCTAAAG",1,23.48,9.87,-0.9,0.12,1.8,1.17,0.01,">1 nonsynonymous","D34Y F62K Q84M",3
"lib1","SARS-CoV-2","GGTCTAGAACTCCGGT",2,46.39,6.56,-4.2,0.47,1.5,1.17,0.03,">1 nonsynonymous","P82S N107S",2
"lib1","SARS-CoV-2","GGTCTAGCCTAGCATA",1,12.01,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y93H F99N F126P P161G",4
"lib1","SARS-CoV-2","GGTCTATAGAAATCTA",2,14.63,9.67,-1.09,0.46,1.5,1.02,0.06,">1 nonsynonymous","N13L A105I",2
"lib1","SARS-CoV-2","GGTCTATAGAGGAGAT",8,160.09,10.45,-0.32,0.04,2.93,1.02,0,">1 nonsynonymous","A33S T46Y T201F",3
"lib1","SARS-CoV-2","GGTCTATCTATCTCAG",3,25.28,9.12,-1.65,0.34,1.5,1,0.05,">1 nonsynonymous","S53G L162H S200F",3
"lib1","SARS-CoV-2","GGTCTCACTGGAAAAG",3,14.4,6.05,-4.71,1.02,1.5,1.2,0.03,">1 nonsynonymous","L5R S53M D68K",3
"lib1","SARS-CoV-2","GGTCTCAGTATTTTAT",1,63.15,10.77,0,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCTCATAAAAAAGC",3,11.32,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","Y93C",1
"lib1","SARS-CoV-2","GGTCTCATCCTAGCTC",1,8.96,9.89,-0.87,0.19,1.9,1.02,0.01,">1 nonsynonymous","L5Y F17W C31L F44R",4
"lib1","SARS-CoV-2","GGTCTCCTGAAAGCAG",4,16.09,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V71S G86E P96A Y123V",4
"lib1","SARS-CoV-2","GGTCTCCTTTGAAACT",5,77.62,10.79,0.02,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTCTCGCTTGTTAGA",2,48.06,10.78,0.02,0.08,2.9,1.07,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","GGTCTCGGTGTGGTTG",3,45.33,10.82,0.06,0.05,2.92,1.02,0,"1 nonsynonymous","N4S",1
"lib1","SARS-CoV-2","GGTCTCTACACTGCAC",1,18.19,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","Y93L T140V",2
"lib1","SARS-CoV-2","GGTCTCTATTTAACAT",7,81.73,NA,NA,NA,NA,NA,NA,"stop","C6* T55A K94E K114H",4
"lib1","SARS-CoV-2","GGTCTGCTCGGGCTCA",12,138.6,9.2,-1.57,0.05,2.85,1.09,0,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","GGTCTGGCAATAAAAC",1,53.59,6.06,-4.71,0.77,1.5,1.19,0.02,">1 nonsynonymous","S41A K87D P133R",3
"lib1","SARS-CoV-2","GGTCTGTAAAGGCACA",4,129.18,10.71,-0.05,0.05,2.85,1.09,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GGTCTGTAACACCTCG",7,51.47,10.85,0.08,0.07,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTCTTAAACGCCGTT",4,52.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E V37A C61V",3
"lib1","SARS-CoV-2","GGTCTTAACCTAAGCG",3,6.38,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","V77G Y93F P133R G152A F160S",5
"lib1","SARS-CoV-2","GGTCTTAGCACAGGCA",2,7.87,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V11F N58V D90I Y143N",4
"lib1","SARS-CoV-2","GGTCTTATAACAATAA",2,31.34,10.9,0.14,0.06,2.96,1,0,">1 nonsynonymous","N24T T55G",2
"lib1","SARS-CoV-2","GGTCTTCAAGTCCCAG",2,74.68,8.04,-2.73,0.2,1.67,1.16,0.01,">1 nonsynonymous","L57E N120S L125R",3
"lib1","SARS-CoV-2","GGTCTTCTCGACGAAC",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W L187M",2
"lib1","SARS-CoV-2","GGTCTTCTGTATCCTG",1,16.94,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F44S Q84E T100P",3
"lib1","SARS-CoV-2","GGTCTTGAACCTTGGC",4,9.82,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K87M W106M N130L V180H",4
"lib1","SARS-CoV-2","GGTCTTGGTCACCCTA",1,41.01,6,-4.76,2,3,1.11,0,">1 nonsynonymous","K26V F134K G146V S200P",4
"lib1","SARS-CoV-2","GGTCTTGTCAAGGCAA",2,17.9,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","F47G Y66A T85M",3
"lib1","SARS-CoV-2","GGTCTTTAGATTTTAC",8,177.89,10.75,-0.01,0.05,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTCTTTCTGGTCAAA",1,14.08,6,-4.76,1.68,1.5,1.07,0.04,">1 nonsynonymous","A42V S108K P149K G166W",4
"lib1","SARS-CoV-2","GGTCTTTGAAGACTAA",1,5.61,10.56,-0.21,0.06,2.99,1,0,"1 nonsynonymous","V65A",1
"lib1","SARS-CoV-2","GGTGAAAACACTCTGA",4,1.66,NA,NA,NA,NA,NA,NA,"stop","T55V P96* P197L",3
"lib1","SARS-CoV-2","GGTGAAACACTAACCG",4,0.91,NA,NA,NA,NA,NA,NA,"stop","I138* G152S F156W K199S",4
"lib1","SARS-CoV-2","GGTGAAACCGATAGGA",2,20.14,6.63,-4.13,0.45,1.5,1.24,0.03,">1 nonsynonymous","V11H G83Y I138P V194I",4
"lib1","SARS-CoV-2","GGTGAAACTATGCCAG",4,31.5,6,-4.76,1.54,1.5,1.16,0.02,">1 nonsynonymous","N30S F47C Y91P D112S G174V E186D",6
"lib1","SARS-CoV-2","GGTGAAAGCGACCTAG",5,20.76,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K56Q F62R I72W N151C G174L",5
"lib1","SARS-CoV-2","GGTGAAATGCACTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V Y91F Q176G",3
"lib1","SARS-CoV-2","GGTGAACGAAAATAGT",6,41.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36R C49E Y119F T148S F160Q G174W",6
"lib1","SARS-CoV-2","GGTGAACTAACCCTGT",5,38.47,10.44,-0.32,0.06,2.8,1,0,">1 nonsynonymous","S29L Y91F",2
"lib1","SARS-CoV-2","GGTGAACTCCGAAATA",2,69.53,7.71,-3.06,0.23,1.5,1.1,0.02,">1 nonsynonymous","D34E K128I G174I",3
"lib1","SARS-CoV-2","GGTGAAGAAATATATT",1,18.47,10.78,0.01,0.13,2.84,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GGTGAAGAAATGGTGT",1,2.42,NA,NA,NA,NA,NA,NA,"stop","G117E V153H K199*",3
"lib1","SARS-CoV-2","GGTGAAGATAGCGTGA",9,85.45,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D68L K94C T201S",3
"lib1","SARS-CoV-2","GGTGAAGCCATGACCA",4,17.35,9.82,-0.95,0.12,2.47,1,0,">1 nonsynonymous","E10V D98T P149L",3
"lib1","SARS-CoV-2","GGTGAAGTTAAAGTGA",11,70.48,6.08,-4.68,0.91,1.5,1.22,0.02,"1 nonsynonymous","P161K",1
"lib1","SARS-CoV-2","GGTGAATAGTGCTCAC",2,119.07,10.73,-0.03,0.05,2.9,1.05,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","GGTGAATCCAAGATAA",9,164.67,9.01,-1.75,0.11,1.88,1.12,0.01,">1 nonsynonymous","V103M G166N",2
"lib1","SARS-CoV-2","GGTGACAAAAGAATAA",3,25.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T3E I72Q S108M Y123G",4
"lib1","SARS-CoV-2","GGTGACAAAATAAAAA",1,20.66,10.89,0.13,0.08,2.91,1.03,0,"1 nonsynonymous","N110S",1
"lib1","SARS-CoV-2","GGTGACAATTAAAGGG",8,55.32,6,-4.76,2,2.15,1.19,0,">1 nonsynonymous","L38T A105N R179S",3
"lib1","SARS-CoV-2","GGTGACACCTAATTCC",4,47.74,10.72,-0.04,0.11,2.85,1.08,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","GGTGACATCTAAAATC",4,16.04,10.15,-0.62,0.19,1.96,1.09,0.03,">1 nonsynonymous","V181T T201I",2
"lib1","SARS-CoV-2","GGTGACATTGAACAAA",4,26.14,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V52R K87E T100M A105N I142R G152A",6
"lib1","SARS-CoV-2","GGTGACCACGAGCCAT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","Y50S L60D G83N I88*",4
"lib1","SARS-CoV-2","GGTGACCAGCTGGCCG",5,14.38,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N13I D90G D98Y Y119I L183M",5
"lib1","SARS-CoV-2","GGTGACCCTTACTTAG",1,26.24,6.26,-4.5,0.29,1.53,1.1,0,">1 nonsynonymous","V115L R127P",2
"lib1","SARS-CoV-2","GGTGACGCCCCCCGAC",3,96.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D112P K198T",2
"lib1","SARS-CoV-2","GGTGACGGAAGCCGTA",3,15.64,8.85,-1.92,0.25,1.5,1.05,0.04,">1 nonsynonymous","L60R R136P",2
"lib1","SARS-CoV-2","GGTGACGTAAAAGCAA",1,21.76,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","K56G G86W D98P",3
"lib1","SARS-CoV-2","GGTGACGTAGGGAAAA",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94A K132I P161Y L183F",4
"lib1","SARS-CoV-2","GGTGACTATACCGATA",4,168.23,8.47,-2.3,0.13,2.34,1.11,0.01,">1 nonsynonymous","V65R N120T",2
"lib1","SARS-CoV-2","GGTGACTGTGAGCCCC",6,0.15,NA,NA,NA,NA,NA,NA,"stop","C6F Y143*",2
"lib1","SARS-CoV-2","GGTGACTTAAATTAAT",1,1.62,NA,NA,NA,NA,NA,NA,"stop","E76* W106S F134A",3
"lib1","SARS-CoV-2","GGTGACTTGATACAGT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","K48R E154* V173M",3
"lib1","SARS-CoV-2","GGTGAGACCGCCCCAT",3,68.1,10.41,-0.36,0.12,2.79,1,0.01,">1 nonsynonymous","S41P F47I C61R",3
"lib1","SARS-CoV-2","GGTGAGAGCCAAACAA",6,62.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S53H A81F F134Q P161R",4
"lib1","SARS-CoV-2","GGTGAGATAAAAGTAT",2,66.06,8.68,-2.09,0.08,2.93,1.05,0,">1 nonsynonymous","S36I L125R N171S",3
"lib1","SARS-CoV-2","GGTGAGGAAAGTTATA",4,47.58,10.73,-0.03,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGAGGAGACACGAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F12* C61L E154D G172S",4
"lib1","SARS-CoV-2","GGTGAGTCGTTAAGCG",1,10.06,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F62E S113L G172P",3
"lib1","SARS-CoV-2","GGTGAGTGCAAAGAGA",17,2.73,NA,NA,NA,NA,NA,NA,"stop","F17V F47S K87V D98V I138H K198*",6
"lib1","SARS-CoV-2","GGTGAGTGGTCCGGAG",7,0.45,NA,NA,NA,NA,NA,NA,"stop","T100E G172*",2
"lib1","SARS-CoV-2","GGTGATAACAGAAGTT",5,30.26,10.46,-0.31,0.05,3,1,0,">1 nonsynonymous","K87I L95V",2
"lib1","SARS-CoV-2","GGTGATAACCGCACAC",7,2.15,NA,NA,NA,NA,NA,NA,"stop","T3S S129* F134K E141N",4
"lib1","SARS-CoV-2","GGTGATACACTATTGA",7,73.17,6.07,-4.69,1.05,1.5,1.27,0.03,">1 nonsynonymous","T55S F99L A105Y",3
"lib1","SARS-CoV-2","GGTGATACTCTAAACA",6,91.41,10.58,-0.19,0.05,2.91,1.01,0,">1 nonsynonymous","N1D Q84V L122S V180C",4
"lib1","SARS-CoV-2","GGTGATAGCCACACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* R27* S69L Q144L C150V",5
"lib1","SARS-CoV-2","GGTGATAGCGCGTGCG",4,33.82,9.77,-1,0.08,2.15,1.12,0,">1 nonsynonymous","K48V T55I I138F S147I",4
"lib1","SARS-CoV-2","GGTGATAGTTGTAACG",8,134.24,10.54,-0.22,0.09,2.73,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGATATGCCAAGGT",1,4.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","GGTGATCACGAATAAT",4,55.92,10.61,-0.15,0.07,2.83,1.1,0,"1 nonsynonymous","N130C",1
"lib1","SARS-CoV-2","GGTGATCCCGGTCAAC",2,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94E C158Y",2
"lib1","SARS-CoV-2","GGTGATCGTGAACTAT",6,0.24,NA,NA,NA,NA,NA,NA,"stop","I28* L95H",2
"lib1","SARS-CoV-2","GGTGATGAAAGGTAAG",3,15.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L S29P P54Q P149N",4
"lib1","SARS-CoV-2","GGTGATTATCTTTGCA",5,129.05,10.12,-0.64,0.04,2.82,1.05,0,"1 nonsynonymous","Y121K",1
"lib1","SARS-CoV-2","GGTGATTATTGGATAG",6,68.86,6,-4.76,0.59,1.5,1.13,0,">1 nonsynonymous","K56L G86Y S129M F167Q Y175T R179D",6
"lib1","SARS-CoV-2","GGTGATTTGCCCATCC",2,0.36,NA,NA,NA,NA,NA,NA,"stop","W23T P54R L122Y S129* P149H",5
"lib1","SARS-CoV-2","GGTGCAAATAAACATA",2,64.11,8.4,-2.36,0.23,1.5,1.13,0.02,">1 nonsynonymous","F12N A18E G166A",3
"lib1","SARS-CoV-2","GGTGCAACCTGGGCAA",1,46.46,10.49,-0.27,0.08,2.95,1.02,0,">1 nonsynonymous","P54V D90T",2
"lib1","SARS-CoV-2","GGTGCAACGCCCCGGA",1,20.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T55V P82L E141F A190I",4
"lib1","SARS-CoV-2","GGTGCAACTAAAACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","GGTGCAACTTATAATA",1,19.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56D Y159S T170L L188W K198Y",5
"lib1","SARS-CoV-2","GGTGCAATCATCAAAA",1,29.99,8.69,-2.07,0.11,2.86,1.11,0.01,">1 nonsynonymous","A81S Y143W F156L",3
"lib1","SARS-CoV-2","GGTGCACGAAAGTGAT",1,10.3,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L5M L95A K128L",3
"lib1","SARS-CoV-2","GGTGCAGAGCAGGTAC",5,64.28,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","R27G D112R R136G Q144W T170N",5
"lib1","SARS-CoV-2","GGTGCAGCACACTACC",1,34.96,10.01,-0.75,0.12,2.28,1,0.01,"1 nonsynonymous","V181A",1
"lib1","SARS-CoV-2","GGTGCAGTCAAAGCAT",2,41.8,10.66,-0.11,0.07,2.89,1.04,0,">1 nonsynonymous","N120G Q144S T148L",3
"lib1","SARS-CoV-2","GGTGCATAACGTATCA",1,7.17,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14I A18S D90E V103K P169S",5
"lib1","SARS-CoV-2","GGTGCATATAAAATAA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","Y121* N151K",2
"lib1","SARS-CoV-2","GGTGCATGACCTGCAA",5,74.75,10.62,-0.14,0.08,2.86,1.08,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","GGTGCATGTGAGCAAC",6,197.67,10.56,-0.21,0.05,2.9,1.01,0,">1 nonsynonymous","I2F N64L N120S",3
"lib1","SARS-CoV-2","GGTGCATGTTACCCCG",8,61.57,9.52,-1.24,0.12,2.01,1.12,0.01,">1 nonsynonymous","G86D L122W",2
"lib1","SARS-CoV-2","GGTGCATTAGTCTTGT",5,60.67,8.94,-1.82,0.08,2.86,1.11,0,">1 nonsynonymous","Y39F D97E L125R F160V",4
"lib1","SARS-CoV-2","GGTGCCAAACACGCTG",3,15.61,6.32,-4.44,0.64,1.5,1.19,0.03,">1 nonsynonymous","G83V P133I",2
"lib1","SARS-CoV-2","GGTGCCAATACTCTTT",4,130.99,9.84,-0.93,0.06,2.74,1.02,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","GGTGCCAATGCTAAAA",2,44.07,10.81,0.04,0.09,2.87,1.08,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","GGTGCCATCCAAACAA",3,72.76,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I72R W106S",2
"lib1","SARS-CoV-2","GGTGCCATTTAAATAA",9,87.17,9.67,-1.1,0.13,1.91,1.08,0.01,"1 nonsynonymous","L131Y",1
"lib1","SARS-CoV-2","GGTGCCCACGGCTACC",3,65.6,10.04,-0.73,0.08,2.5,1.04,0,">1 nonsynonymous","S29T D90S V173S",3
"lib1","SARS-CoV-2","GGTGCCCATTATAAAG",2,44.62,10.26,-0.51,0.04,2.86,1.07,0,">1 nonsynonymous","A42L G174P",2
"lib1","SARS-CoV-2","GGTGCCCGAATGTAAG",5,0.45,NA,NA,NA,NA,NA,NA,"stop","E10C S113* P191F",3
"lib1","SARS-CoV-2","GGTGCCCTACGCCAAT",2,59.23,7.57,-3.2,0.23,1.5,1.15,0.02,">1 nonsynonymous","T46F W106L G146W",3
"lib1","SARS-CoV-2","GGTGCCGATGGTACAC",3,82.25,10.75,-0.01,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGCCTCCAGCATTA",4,40.03,10.17,-0.6,0.14,2.22,1.01,0.01,">1 nonsynonymous","T3V Y39K T63R I104T N130L",5
"lib1","SARS-CoV-2","GGTGCCTTAAGAACCA",3,50.17,6.63,-4.13,0.73,1.5,1.06,0.06,"1 nonsynonymous","I80K",1
"lib1","SARS-CoV-2","GGTGCGACAAAATTAG",4,1.62,NA,NA,NA,NA,NA,NA,"stop","G51R C61L S113* V182K",4
"lib1","SARS-CoV-2","GGTGCGACAATAAAGG",16,203.38,10.2,-0.57,0.05,2.66,1.03,0,">1 nonsynonymous","E10D R136Y",2
"lib1","SARS-CoV-2","GGTGCGACCTGTTGCA",2,8.21,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N58T N64R V77T Y159T",4
"lib1","SARS-CoV-2","GGTGCGCGAAAGGTAA",7,68.68,9.73,-1.04,0.09,2.64,1.03,0,">1 nonsynonymous","Y121T H189S",2
"lib1","SARS-CoV-2","GGTGCGCGTTCTACGC",8,114.43,10.75,-0.02,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGCGTAAGTTGACG",2,39.92,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y91L N107L R127D",3
"lib1","SARS-CoV-2","GGTGCTAAAGACTTCA",1,32.92,10.68,-0.09,0.06,2.91,1.08,0,">1 nonsynonymous","Y39L N151S V173E",3
"lib1","SARS-CoV-2","GGTGCTAGGGTTACTA",3,113.16,10.52,-0.25,0.05,2.89,1.03,0,">1 nonsynonymous","K48E N58P P149M",3
"lib1","SARS-CoV-2","GGTGCTCTCATCAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C V103R Q168R V173M",4
"lib1","SARS-CoV-2","GGTGCTCTGGTCTATG",3,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I L60F I104V I142K P161I F167V",6
"lib1","SARS-CoV-2","GGTGCTGATACATTCA",2,5.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K26W G116S E141K",4
"lib1","SARS-CoV-2","GGTGCTGTTGCTGTAT",3,9.38,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V37L T85Y V103R V153M",4
"lib1","SARS-CoV-2","GGTGGAAAACGAGAAA",4,97.33,10.61,-0.15,0.04,2.86,1.05,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","GGTGGAAATGAGATCC",4,1.53,NA,NA,NA,NA,NA,NA,"stop","T55S R73*",2
"lib1","SARS-CoV-2","GGTGGACAATTAAAGT",6,80.42,10.11,-0.66,0.08,2.71,1.05,0,">1 nonsynonymous","R27T V37I F62N D97V",4
"lib1","SARS-CoV-2","GGTGGAGGGTTCAAAC",5,0,NA,NA,NA,NA,NA,NA,"stop","D34G A42* R127Y P191N K198L",5
"lib1","SARS-CoV-2","GGTGGATAATAGACCG",1,9.76,6,-4.76,2,3,1.04,0,">1 nonsynonymous","C6R K56T T100G F160W",4
"lib1","SARS-CoV-2","GGTGGATACGCTTAAA",5,58.88,10.79,0.03,0.08,2.94,1.04,0,">1 nonsynonymous","D98N S147T",2
"lib1","SARS-CoV-2","GGTGGATAGTTGTCAT",1,41.75,10.81,0.04,0.08,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGGATGAACCACAA",19,230.1,10.59,-0.17,0.04,2.93,1.02,0,">1 nonsynonymous","F44Y G51R P149H",3
"lib1","SARS-CoV-2","GGTGGATTTATATCCA",2,87.27,10.51,-0.26,0.1,2.69,1.14,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","GGTGGCAAACATACCC",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84H N120Y P161S",3
"lib1","SARS-CoV-2","GGTGGCCCCCGGGGTA",6,46.41,7.46,-3.31,0.4,1.5,1.08,0.04,">1 nonsynonymous","Y35S Q84L G116R E141V",4
"lib1","SARS-CoV-2","GGTGGCGCTTTCCTTA",2,36.99,10.65,-0.11,0.05,2.97,1,0,">1 nonsynonymous","L60I T148I",2
"lib1","SARS-CoV-2","GGTGGCGGACTGAGGT",4,98.45,10.87,0.1,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTGGCGGCCACTTAA",2,31.88,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","Y50T G101D K128E Q176A",4
"lib1","SARS-CoV-2","GGTGGCGGTTGCGAAT",6,79.6,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6D D68T R124C S129R E154T",5
"lib1","SARS-CoV-2","GGTGGCTAACCACAAT",2,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y S41R Y66R D97H N107S",5
"lib1","SARS-CoV-2","GGTGGCTTACGACTTG",4,15.28,6,-4.76,2,3,1.13,0.02,">1 nonsynonymous","S53Q G86S A105K",3
"lib1","SARS-CoV-2","GGTGGGAGATAACTGA",2,31.68,10.57,-0.19,0.08,2.9,1.05,0,">1 nonsynonymous","T3C N64S",2
"lib1","SARS-CoV-2","GGTGGGATTAACACAT",3,33.58,10.24,-0.52,0.08,2.79,1.16,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","GGTGGGGAGTAATACC",3,19.42,7.49,-3.28,0.43,1.5,1.12,0.07,">1 nonsynonymous","N4C G51Y N64Q K87A L188I",5
"lib1","SARS-CoV-2","GGTGGGTTACGCCCAG",1,13.29,9.73,-1.04,0.1,2.74,1.15,0.01,">1 nonsynonymous","G74K E154Q",2
"lib1","SARS-CoV-2","GGTGGTACCTACTCCG",4,12.94,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13G N58K P82K F126Y C158L",5
"lib1","SARS-CoV-2","GGTGGTACGAAGAGCA",2,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L C49F T55I G83K W106Q S129W T170M",7
"lib1","SARS-CoV-2","GGTGGTAGCGACGCAA",5,123.41,9.88,-0.89,0.07,2.09,1.06,0,">1 nonsynonymous","V52N K128E P149I V173E",4
"lib1","SARS-CoV-2","GGTGGTATCCCTAGCG",5,19.67,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","C61F Q79T D112W G146T",4
"lib1","SARS-CoV-2","GGTGGTATGGCTACCA",4,23.95,6,-4.76,2,3,1.08,0,">1 nonsynonymous","T55S N64Q V77M G101E N110L",5
"lib1","SARS-CoV-2","GGTGGTCATTGAACAT",2,37.05,8.49,-2.27,0.17,1.5,1.04,0.01,">1 nonsynonymous","E10C N40P V77M",3
"lib1","SARS-CoV-2","GGTGGTCGACGATCAC",1,13.33,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","I72H R124P P133I T170L",4
"lib1","SARS-CoV-2","GGTGTAAATGAATGTG",3,18.09,8.57,-2.2,0.23,1.8,1.18,0.01,">1 nonsynonymous","S19Y A33I V37I",3
"lib1","SARS-CoV-2","GGTGTAACTGAATACC",4,53.28,10.67,-0.1,0.06,2.89,1.09,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","GGTGTATAAAACCGAG",3,55.16,10.78,0.01,0.09,2.9,1.05,0,">1 nonsynonymous","T55G N64S",2
"lib1","SARS-CoV-2","GGTGTATGAACTTTCC",1,70.24,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","V37K F47S T85G N92F",4
"lib1","SARS-CoV-2","GGTGTATTGGACCGGA",2,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E V103F Q176Y",3
"lib1","SARS-CoV-2","GGTGTCAAAGACGCCA",4,11.96,6,-4.76,2,1.5,1.25,0.04,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","GGTGTCAACCCCATCC",8,174.91,10.77,0,0.07,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTGTCACGAAACCGT",3,0,NA,NA,NA,NA,NA,NA,"stop","S19L S45D K56E S69* P82L Y143E G155T",7
"lib1","SARS-CoV-2","GGTGTCAGCCCACAGT",1,25.67,10.41,-0.35,0.06,2.92,1,0,">1 nonsynonymous","F44T T140R",2
"lib1","SARS-CoV-2","GGTGTCATACAAGCAC",3,51.31,10.75,-0.01,0.11,2.9,1.06,0.01,">1 nonsynonymous","T15S S129K P197S",3
"lib1","SARS-CoV-2","GGTGTCCAGGGTCCAA",3,1.22,NA,NA,NA,NA,NA,NA,"stop","T3P A33R L122K P169*",4
"lib1","SARS-CoV-2","GGTGTCGAATGTATGT",4,27.79,9.95,-0.81,0.14,1.99,1.08,0.01,">1 nonsynonymous","A105F T140A",2
"lib1","SARS-CoV-2","GGTGTCTATTACTCGT",6,9.3,8.38,-2.38,0.22,1.5,1.13,0.02,">1 nonsynonymous","A81N T85M P149Y",3
"lib1","SARS-CoV-2","GGTGTCTGCAAATATA",2,32.55,10.19,-0.57,0.18,2.58,1.43,0.02,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","GGTGTGAACTAAAATA",4,42.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N151Q F167I",2
"lib1","SARS-CoV-2","GGTGTGACGTCGACCG",3,46.03,10.56,-0.2,0.08,2.82,1.02,0,">1 nonsynonymous","S36N P54I V173F T201Y",4
"lib1","SARS-CoV-2","GGTGTGAGAGTGATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A Y119S",2
"lib1","SARS-CoV-2","GGTGTGAGTTAGTGGT",1,15.36,10.59,-0.18,0.09,2.72,1.19,0,"1 nonsynonymous","N130G",1
"lib1","SARS-CoV-2","GGTGTGCGGTTCTCAG",5,0.55,NA,NA,NA,NA,NA,NA,"stop","T3S E10S R25S F47* G155L",5
"lib1","SARS-CoV-2","GGTGTGGACTCAAAGC",2,22.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N92W T100M Q144K P161C",4
"lib1","SARS-CoV-2","GGTGTGTGTCAAAGAC",3,84.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9V N40S V52S Y175L T201Q",5
"lib1","SARS-CoV-2","GGTGTTAGAAAGTTAC",1,0.72,NA,NA,NA,NA,NA,NA,"stop","F8* A67T R136G",3
"lib1","SARS-CoV-2","GGTGTTAGTATATCGC",3,26.03,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","K87T I88R D97M E154A",4
"lib1","SARS-CoV-2","GGTGTTATTGATTATA",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L V103E",2
"lib1","SARS-CoV-2","GGTGTTCCGAAAAAGC",1,12.74,10.61,-0.15,0.08,2.87,1.12,0.01,">1 nonsynonymous","I2V I28F G146A",3
"lib1","SARS-CoV-2","GGTGTTCTATTAAATA",6,45.59,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N24H K48D T100P Q144L P197S",5
"lib1","SARS-CoV-2","GGTGTTGATCAACCAT",4,44.55,9.89,-0.88,0.13,2.31,1,0.01,">1 nonsynonymous","S36G N58S A89V",3
"lib1","SARS-CoV-2","GGTGTTGTTCTTGAGG",4,52.34,9.96,-0.8,0.08,2.13,1.04,0,"1 nonsynonymous","F185P",1
"lib1","SARS-CoV-2","GGTGTTTAATAATTGT",8,124.42,10.68,-0.08,0.04,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTGTTTATCCTGCGA",3,43.97,9.85,-0.92,0.12,2,1.03,0.01,">1 nonsynonymous","P96H P149S T201E",3
"lib1","SARS-CoV-2","GGTGTTTCATCTAAGT",2,33.49,9.99,-0.78,0.18,2.41,1.01,0.01,"1 nonsynonymous","G51Y",1
"lib1","SARS-CoV-2","GGTGTTTGTACAAATC",4,22.32,10.58,-0.18,0.08,2.97,1,0,">1 nonsynonymous","S29T P169S",2
"lib1","SARS-CoV-2","GGTTAAAAAATTATAA",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S N109Q",2
"lib1","SARS-CoV-2","GGTTAAAATCCCGACC",3,0.67,NA,NA,NA,NA,NA,NA,"stop","N107W E154K C158* Y165R F185S",5
"lib1","SARS-CoV-2","GGTTAAACAAAAGGCA",11,175.65,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5G S69V G166E",3
"lib1","SARS-CoV-2","GGTTAAACTATCCAAA",3,11.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18T L38R K132E",3
"lib1","SARS-CoV-2","GGTTAAACTGTTTAAT",1,11.1,8.02,-2.74,0.21,1.94,1.02,0.02,">1 nonsynonymous","D97F R136K Y143T",3
"lib1","SARS-CoV-2","GGTTAAAGCAGGACAC",3,71.94,10.28,-0.48,0.05,2.95,1.01,0,"1 nonsynonymous","G166A",1
"lib1","SARS-CoV-2","GGTTAAAGGGGGGACC",3,22.25,9.94,-0.82,0.12,2.14,1,0,">1 nonsynonymous","T100S I104T",2
"lib1","SARS-CoV-2","GGTTAAATATTATTGA",1,2.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","GGTTAAATGTCTGAAC",1,25.57,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T15C N24W S41Y T55Q I80A N92H N107Y",7
"lib1","SARS-CoV-2","GGTTAACACCGCAGCT",3,29.9,6.22,-4.54,0.59,1.5,1.18,0.01,">1 nonsynonymous","S41T D59A A105R P149S",4
"lib1","SARS-CoV-2","GGTTAACATAACCCAA",1,14.79,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","I28K K48G",2
"lib1","SARS-CoV-2","GGTTAACATTACGGCG",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74F G83W Y143D P169L L187Y K198T",6
"lib1","SARS-CoV-2","GGTTAACCAAAAACGG",3,41.96,10.13,-0.63,0.11,2.66,1,0,">1 nonsynonymous","V32L F44R T148S",3
"lib1","SARS-CoV-2","GGTTAACCCCAATCAA",2,30.82,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","GGTTAACGCTTAAACA",1,5.24,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F62L K87D Y123D F134R E141K F156M P169K V181E",8
"lib1","SARS-CoV-2","GGTTAACGTTCAAGGT",3,37.61,7.16,-3.6,0.16,2.2,1.14,0.01,"1 nonsynonymous","C150A",1
"lib1","SARS-CoV-2","GGTTAACTCCCGTCCT",2,2.08,NA,NA,NA,NA,NA,NA,"stop","P177* V181L",2
"lib1","SARS-CoV-2","GGTTAACTGAGCAGAG",13,293.22,10.25,-0.52,0.03,2.91,1.02,0,">1 nonsynonymous","A33Q Y123S L187F A192E T201M",5
"lib1","SARS-CoV-2","GGTTAAGGGCGGAGCG",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M Q144M K198N",3
"lib1","SARS-CoV-2","GGTTAATAGACACAAA",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Y A42G",2
"lib1","SARS-CoV-2","GGTTAATCAATCTCAT",9,45,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4W G51D F185C",3
"lib1","SARS-CoV-2","GGTTAATCCTTGATCC",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M T85M S139T",3
"lib1","SARS-CoV-2","GGTTAATCGAATATAG",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y I88D W106K",3
"lib1","SARS-CoV-2","GGTTAATCGCGTAATC",3,47.49,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12D I138W N157R K198C",4
"lib1","SARS-CoV-2","GGTTAATGGATCACCT",11,3.61,NA,NA,NA,NA,NA,NA,"stop","P96S I104* I138M",3
"lib1","SARS-CoV-2","GGTTAATTACTATAAC",2,14.75,10.92,0.15,0.15,2.72,1.19,0.01,"1 nonsynonymous","T148M",1
"lib1","SARS-CoV-2","GGTTACAAATAAGAAC",2,28.67,10.79,0.02,0.09,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTACAACACTAAAT",2,52.58,10.29,-0.47,0.07,2.77,1.01,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","GGTTACAACACTTATT",4,82.52,10.72,-0.04,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTACAAGAAACTTG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GGTTACAATAATGAGC",1,31.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4P T55S N92L L162M",4
"lib1","SARS-CoV-2","GGTTACAATGTGATTG",1,38.33,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I2S C6V G172L",3
"lib1","SARS-CoV-2","GGTTACACCAAATTAG",2,27.98,10.79,0.03,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTACACCATGCCCC",3,98.75,10.73,-0.03,0.05,2.89,1.08,0,"1 nonsynonymous","R27E",1
"lib1","SARS-CoV-2","GGTTACACGCCTTTTG",5,11.26,10.76,0,0.18,2.61,1.18,0.01,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","GGTTACAGATTCCGTT",4,28.75,6,-4.76,2,3,1.37,0.01,">1 nonsynonymous","A42V Y93I I104K",3
"lib1","SARS-CoV-2","GGTTACAGGACAAATT",3,33.87,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y121V Y159F T170I",3
"lib1","SARS-CoV-2","GGTTACAGTACTGAAT",2,18.09,10.39,-0.37,0.11,2.68,1,0.01,"1 nonsynonymous","A81N",1
"lib1","SARS-CoV-2","GGTTACATCATTTGGA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","K56F P96S N157*",3
"lib1","SARS-CoV-2","GGTTACATCCGCACAA",2,9.41,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","Y35H A89Y P133L",3
"lib1","SARS-CoV-2","GGTTACCGACTCATGG",5,25.5,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","T46I Y50D K94F T140Q C195Y",5
"lib1","SARS-CoV-2","GGTTACCTCGCAATCC",2,58.99,10.09,-0.67,0.14,2.32,1.06,0.01,"1 nonsynonymous","L162T",1
"lib1","SARS-CoV-2","GGTTACGAAAAATCTT",2,31.98,10.73,-0.04,0.06,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTTACGCCCTGTACG",1,57.04,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","R25A N64C K114M",3
"lib1","SARS-CoV-2","GGTTACGGTATCATTC",2,45.9,9.67,-1.1,0.09,2.22,1.07,0,">1 nonsynonymous","P7S T15I G155T",3
"lib1","SARS-CoV-2","GGTTACGTTGAGACAG",1,5.18,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","S43N D90N F99T Y119S",4
"lib1","SARS-CoV-2","GGTTACTCCTGCAGCC",3,62.05,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2Y Q79V N120T G155S",4
"lib1","SARS-CoV-2","GGTTAGAACAAAACCA",4,0,NA,NA,NA,NA,NA,NA,"stop","V71M D97* T140S P149R P197V T201S",6
"lib1","SARS-CoV-2","GGTTAGACAACGTAAC",2,60.63,10.35,-0.41,0.12,2.87,1,0,">1 nonsynonymous","N4W N40K",2
"lib1","SARS-CoV-2","GGTTAGATAATTAACG",12,149.1,10.32,-0.45,0.03,2.88,1.04,0,">1 nonsynonymous","G9L D59G",2
"lib1","SARS-CoV-2","GGTTAGCTCGCCATCC",3,48.17,6.07,-4.69,0.73,1.5,1.15,0.01,">1 nonsynonymous","N13V F44M Y175L",3
"lib1","SARS-CoV-2","GGTTAGCTTCTTAATG",2,0.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","GGTTAGGACGTCAAGG",4,70.24,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S139L P177A R179G",3
"lib1","SARS-CoV-2","GGTTAGGATTTCTTAG",6,13.19,7.42,-3.35,0.33,1.5,1,0.04,">1 nonsynonymous","N13F I28R V115S E154Y",4
"lib1","SARS-CoV-2","GGTTAGGTACTAGATA",1,33.87,10.81,0.04,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTAGGTGTTAACTA",1,10.62,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","S45N D59S D75F P82R K87L S129L",6
"lib1","SARS-CoV-2","GGTTAGTATTCACAAA",3,89.55,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6Y C150A S200D",3
"lib1","SARS-CoV-2","GGTTATAATTCGAGTG",1,13.14,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I80L S113P R127V P169L",4
"lib1","SARS-CoV-2","GGTTATACAGCGCCCA",2,16.68,8.77,-1.99,0.09,1.71,1.14,0,">1 nonsynonymous","G9L W106H",2
"lib1","SARS-CoV-2","GGTTATACATCCTTTC",1,82.86,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","I72K G174A",2
"lib1","SARS-CoV-2","GGTTATACATGGTTCC",4,49.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A S36Q F99L C150V",4
"lib1","SARS-CoV-2","GGTTATACCTGATGAA",2,21.74,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A33P A81P W106M A145V P149K",5
"lib1","SARS-CoV-2","GGTTATCATAAACTTG",6,47.96,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","V20C S29Q P161I G196R",4
"lib1","SARS-CoV-2","GGTTATCATACCTCAA",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y G101R T140N",3
"lib1","SARS-CoV-2","GGTTATCTGAGAGCAA",4,2.51,NA,NA,NA,NA,NA,NA,"stop","R127S R136*",2
"lib1","SARS-CoV-2","GGTTATCTTATAGTCG",1,6.95,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","P96M G101Q L122G",3
"lib1","SARS-CoV-2","GGTTATGAATATACAA",2,10.86,9.73,-1.03,0.17,2.18,1.1,0.02,">1 nonsynonymous","D59E W106L",2
"lib1","SARS-CoV-2","GGTTATGCCCACCAGT",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q L60M K94Y",3
"lib1","SARS-CoV-2","GGTTATGTGCGGAAAT",2,1.5,NA,NA,NA,NA,NA,NA,"stop","S36F N130I D137* K198N",4
"lib1","SARS-CoV-2","GGTTATTAAAACCCCT",13,140.07,10.51,-0.25,0.04,2.88,1.08,0,">1 nonsynonymous","F62L G174S",2
"lib1","SARS-CoV-2","GGTTATTAAAACCTCG",2,84.95,9.93,-0.84,0.07,2.62,1.06,0,">1 nonsynonymous","S36L S139A N151T",3
"lib1","SARS-CoV-2","GGTTATTATTGACTGT",4,34.92,6.27,-4.5,0.76,1.53,1.23,0.02,">1 nonsynonymous","L57R A145Y P177L",3
"lib1","SARS-CoV-2","GGTTATTGAACTGGTA",2,56.08,8.61,-2.15,0.16,2,1.13,0.01,">1 nonsynonymous","I2P F8W Y35G G116S F160N T170K K198C",7
"lib1","SARS-CoV-2","GGTTATTGAGTGAATA",3,45.31,10.46,-0.3,0.06,2.95,1.02,0,">1 nonsynonymous","L131I T170S K199E",3
"lib1","SARS-CoV-2","GGTTCAAATATAAGGG",1,15.13,8.31,-2.46,0.12,1.82,1.02,0.01,"1 nonsynonymous","D112H",1
"lib1","SARS-CoV-2","GGTTCAACGGCTGACA",1,17.56,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C31E C49V",2
"lib1","SARS-CoV-2","GGTTCAAGAAGAAAAC",2,15.93,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N64V G86H W106G A190T",4
"lib1","SARS-CoV-2","GGTTCAAGGCAAATTA",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y D90Y N107L",3
"lib1","SARS-CoV-2","GGTTCAAGTCGAATTA",9,59.57,10.81,0.04,0.12,2.79,1.09,0.01,">1 nonsynonymous","A33T Q168H T201N",3
"lib1","SARS-CoV-2","GGTTCACCTCACACGG",6,0,NA,NA,NA,NA,NA,NA,"stop","Y35K W106* P149R L162R",4
"lib1","SARS-CoV-2","GGTTCACTAAAACGAA",12,1004.51,10.56,-0.21,0.03,2.93,1.02,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","GGTTCAGTTCTTATCA",7,75.93,8.62,-2.15,0.14,2.22,1.12,0.01,">1 nonsynonymous","I28W V37N C61Q N107L",4
"lib1","SARS-CoV-2","GGTTCATAAAGAATTT",3,16.74,10.2,-0.57,0.13,2.69,1,0.01,">1 nonsynonymous","S41L T85G P149L",3
"lib1","SARS-CoV-2","GGTTCATAACCGTAGC",1,2.13,NA,NA,NA,NA,NA,NA,"stop","K128G P161*",2
"lib1","SARS-CoV-2","GGTTCATAATGAAGGA",4,43.06,9.37,-1.4,0.07,2.84,1.07,0,">1 nonsynonymous","Y119A E141K",2
"lib1","SARS-CoV-2","GGTTCATATCTGCTGT",1,31.29,10.02,-0.75,0.07,2.57,1,0,">1 nonsynonymous","A89V D98H",2
"lib1","SARS-CoV-2","GGTTCCAAGTGATTAT",4,25.06,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","W23T T170Y",2
"lib1","SARS-CoV-2","GGTTCCACGAGACCCT",5,71.71,10.04,-0.72,0.06,2.77,1,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","GGTTCCATTATCTATA",2,36.98,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","V181K",1
"lib1","SARS-CoV-2","GGTTCCCTTTTCAAGT",2,12.39,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N64S N118T C158L",3
"lib1","SARS-CoV-2","GGTTCCGTTATGTATT",3,90.33,10.7,-0.07,0.08,2.85,1.09,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","GGTTCGAAACTCAACC",6,39.08,6,-4.76,1.75,1.5,1.2,0.02,">1 nonsynonymous","D68A T148C",2
"lib1","SARS-CoV-2","GGTTCGCATAAATAAA",1,43.28,10.06,-0.7,0.1,2.82,1.02,0.01,">1 nonsynonymous","L57M A89P",2
"lib1","SARS-CoV-2","GGTTCGCGATTTACAG",6,41.48,10.84,0.08,0.09,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTCGTGGAAAGGCA",9,130.51,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","A42I V52P C61M D68M Y165L C195T",6
"lib1","SARS-CoV-2","GGTTCTAAAAGGACCA",1,1.08,NA,NA,NA,NA,NA,NA,"stop","T100* K128G",2
"lib1","SARS-CoV-2","GGTTCTAAAATAAATG",1,13.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y91T L111S A145R Y175G",4
"lib1","SARS-CoV-2","GGTTCTAAAGAACTTC",1,17.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8D Y35L L38I N40M V52A C61M Q84L L125P T148S",9
"lib1","SARS-CoV-2","GGTTCTAACAACAATA",1,27.45,10.25,-0.51,0.07,2.79,1.05,0,">1 nonsynonymous","A67I E141L",2
"lib1","SARS-CoV-2","GGTTCTAACAGGTTAT",1,35.89,6,-4.76,1.2,1.5,1.18,0.02,">1 nonsynonymous","D68A F134Y Y143I",3
"lib1","SARS-CoV-2","GGTTCTAACATGGTCT",6,88.96,9.78,-0.98,0.11,2.42,1.05,0,">1 nonsynonymous","V32S F160E V173E",3
"lib1","SARS-CoV-2","GGTTCTACACAAGTAT",3,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112M D137V",2
"lib1","SARS-CoV-2","GGTTCTATATTGAACG",5,16.45,6,-4.76,1.77,1.5,1.08,0.02,">1 nonsynonymous","Y50H L95G",2
"lib1","SARS-CoV-2","GGTTCTCAAGAGTGCC",5,0.79,NA,NA,NA,NA,NA,NA,"stop","R25L S129*",2
"lib1","SARS-CoV-2","GGTTCTCAGGAGGGGG",2,11.82,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","C6K K56L T85A G101T",4
"lib1","SARS-CoV-2","GGTTCTCCCCCTATAC",3,79.68,10.15,-0.61,0.07,2.65,1.04,0,">1 nonsynonymous","D98F N120L",2
"lib1","SARS-CoV-2","GGTTCTCGGTTCCATT",3,14.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I G101L S139F G174E",4
"lib1","SARS-CoV-2","GGTTCTCGTTAATCAC",8,100.09,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","E10G A18F I72S G83N D90F",5
"lib1","SARS-CoV-2","GGTTCTGAATTAATAG",8,128.24,9.68,-1.08,0.18,1.73,1.13,0.01,">1 nonsynonymous","I2Q F12R V37N",3
"lib1","SARS-CoV-2","GGTTCTGATAAGCTAT",3,25.61,6.24,-4.53,0.4,1.5,1.11,0.01,">1 nonsynonymous","L38S D90C Y165V",3
"lib1","SARS-CoV-2","GGTTCTGTCGACCGCG",2,57.33,10.53,-0.23,0.05,2.85,1.07,0,">1 nonsynonymous","R27K L60P",2
"lib1","SARS-CoV-2","GGTTCTTTACACTATT",5,54.32,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R27I P96Q Y123I E154N",4
"lib1","SARS-CoV-2","GGTTGAAACATTGAGC",3,52.77,9.77,-1,0.07,2.72,1.07,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","GGTTGAACATAATCCA",2,39.04,10.24,-0.52,0.06,2.94,1,0,">1 nonsynonymous","C6D C195S",2
"lib1","SARS-CoV-2","GGTTGAACCCGCGAAC",5,0,NA,NA,NA,NA,NA,NA,"stop","I28S I142*",2
"lib1","SARS-CoV-2","GGTTGAACTTATGAAA",6,101.67,9.95,-0.81,0.08,2.04,1.01,0,">1 nonsynonymous","F44P D59K A81S N110S",4
"lib1","SARS-CoV-2","GGTTGAAGGCTGGCAT",2,0.27,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GGTTGAATCGGGATTT",2,13.18,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K87F E135L Q176L",3
"lib1","SARS-CoV-2","GGTTGAATCTATATAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","GGTTGACAATCTTATA",2,7.8,6.33,-4.43,0.33,3,1,0,">1 nonsynonymous","R25A D90L S164Y",3
"lib1","SARS-CoV-2","GGTTGACAGGCCAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L T46F P54A Y121T C158Y",5
"lib1","SARS-CoV-2","GGTTGACCTCTTCCAA",1,56.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N40R S139L C150W",3
"lib1","SARS-CoV-2","GGTTGATATACAAACC",2,15.48,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61S G101A",2
"lib1","SARS-CoV-2","GGTTGATCTAACGCGG",1,24.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V G86L T100G L122G",4
"lib1","SARS-CoV-2","GGTTGATTACCACTAT",4,38.38,10.48,-0.28,0.06,2.81,1.15,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","GGTTGATTTAAACTTA",3,0,NA,NA,NA,NA,NA,NA,"stop","T55L P82* P133R G155F",4
"lib1","SARS-CoV-2","GGTTGATTTTGTTCTG",2,16.7,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C31K G101R L122R",3
"lib1","SARS-CoV-2","GGTTGCAACTGGCGTG",1,0.42,NA,NA,NA,NA,NA,NA,"stop","P7M A14* K56R P96R F167G",5
"lib1","SARS-CoV-2","GGTTGCACTATTAAAG",1,5.36,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A81P G152V",2
"lib1","SARS-CoV-2","GGTTGCATATGATACT",5,39.42,6,-4.76,2,3,1.19,0,">1 nonsynonymous","N64G F99S G146E",3
"lib1","SARS-CoV-2","GGTTGCCTTACATTAT",3,21.69,10.64,-0.13,0.06,2.88,1.07,0,">1 nonsynonymous","F44Y K114Q",2
"lib1","SARS-CoV-2","GGTTGCGGCGCTTTAA",7,202.85,10.02,-0.74,0.09,2.46,1.03,0,">1 nonsynonymous","T3D S53M D98Y P149R",4
"lib1","SARS-CoV-2","GGTTGCGTATAACGAA",7,62.06,6.24,-4.52,0.76,1.5,1.1,0.03,">1 nonsynonymous","N64I G86N C102Y W106T Y119Q",5
"lib1","SARS-CoV-2","GGTTGCTACTTGTCTA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43W T85R V103R G152K P197L",5
"lib1","SARS-CoV-2","GGTTGGAAATTGTGGT",2,21.72,6,-4.76,0.89,3,1.09,0.01,">1 nonsynonymous","N4K R127S P161W",3
"lib1","SARS-CoV-2","GGTTGGCCCACCTGAC",11,94.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L95T S113P",2
"lib1","SARS-CoV-2","GGTTGGGCTGTTCTAT",3,16.06,10.56,-0.21,0.06,2.81,1.11,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","GGTTGGGGGACAAGAT",3,21.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V153F N171Y",2
"lib1","SARS-CoV-2","GGTTGGGTGCCCTCCT",3,39.96,10.73,-0.03,0.05,2.95,1.04,0,">1 nonsynonymous","I138L N151L",2
"lib1","SARS-CoV-2","GGTTGGTCAAAATAAT",2,12.22,10.87,0.1,0.09,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GGTTGTATGAAATATA",3,44.05,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y35P I142D L162N",3
"lib1","SARS-CoV-2","GGTTGTCAAACGATAC",1,10.15,10.73,-0.03,0.07,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTGTGCTGGAATAT",10,29.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D T100K L183S",3
"lib1","SARS-CoV-2","GGTTGTGTTATAATAA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","L5W T15* Y39P C49M P177S",5
"lib1","SARS-CoV-2","GGTTGTTCTACTCGTG",3,29.98,10.06,-0.7,0.07,2.75,1.03,0,">1 nonsynonymous","T85I S129C E154M",3
"lib1","SARS-CoV-2","GGTTTAAAGATCCCTG",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H V32S",2
"lib1","SARS-CoV-2","GGTTTAAAGGAATACA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","Y39* S53N G101M S113K",4
"lib1","SARS-CoV-2","GGTTTAACCCATGTGC",3,15.19,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","F47S C61D N107V Y123V S139W",5
"lib1","SARS-CoV-2","GGTTTAACCTAATCTA",10,77.99,10.3,-0.47,0.05,2.85,1,0,">1 nonsynonymous","Y39L N120Q E141W N151F",4
"lib1","SARS-CoV-2","GGTTTAAGAGCTAGTT",1,9.58,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5A Y50D Y91I I142K",4
"lib1","SARS-CoV-2","GGTTTAAGGTGAAGTT",6,58.38,9.19,-1.57,0.15,2.23,1.19,0.01,">1 nonsynonymous","Y91K E135D F156R",3
"lib1","SARS-CoV-2","GGTTTAAGTACCGCCA",5,68.68,9.94,-0.83,0.11,2.39,1.03,0,">1 nonsynonymous","D90I G152N",2
"lib1","SARS-CoV-2","GGTTTAAGTCACGCGC",1,0.69,NA,NA,NA,NA,NA,NA,"stop","A18Y A42V Y119A N151*",4
"lib1","SARS-CoV-2","GGTTTAATATCAAGTC",1,23.33,10.85,0.09,0.05,3,1,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","GGTTTAATCACACGTG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","G86R D112N E154H Q168L A192M K198*",6
"lib1","SARS-CoV-2","GGTTTAATGCCTGGAC",4,79.33,8.61,-2.16,0.16,1.88,1.12,0.01,">1 nonsynonymous","C102M N118K L188N",3
"lib1","SARS-CoV-2","GGTTTAATTATTAGAC",8,117.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N30V N58S D98A Y143L",4
"lib1","SARS-CoV-2","GGTTTACATATTCCTG",5,50.66,10.66,-0.11,0.08,2.85,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTTACTTGACGATG",1,9,10.53,-0.24,0.09,2.9,1.13,0,">1 nonsynonymous","N24V Y35F",2
"lib1","SARS-CoV-2","GGTTTAGAAGAGTCCG",7,39.06,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N110I Y143W C150F G196L",4
"lib1","SARS-CoV-2","GGTTTAGAGAGGGATC",2,46.05,9.72,-1.04,0.08,1.97,1.09,0,">1 nonsynonymous","Y50V T63S",2
"lib1","SARS-CoV-2","GGTTTAGCACACTGTA",2,51.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I S36F G83I",3
"lib1","SARS-CoV-2","GGTTTAGGATACTTAC",4,43,6,-4.76,1.42,1.5,1.19,0.02,"1 nonsynonymous","R179F",1
"lib1","SARS-CoV-2","GGTTTAGTATTTAACA",2,20.45,10.85,0.08,0.09,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTTCAAGAAGGACT",4,44.12,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T3P E141V C150S T170R",4
"lib1","SARS-CoV-2","GGTTTCAGATGCATAC",5,100.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M G146W C150S",3
"lib1","SARS-CoV-2","GGTTTCATACAATGAA",8,183.26,10.69,-0.07,0.06,2.94,1.05,0,">1 nonsynonymous","N64T D98A",2
"lib1","SARS-CoV-2","GGTTTCCAAAGTTATA",6,154.95,10.69,-0.07,0.04,2.9,1.03,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","GGTTTCCAATAGACGT",1,11.87,10.68,-0.08,0.08,2.97,1,0,"1 nonsynonymous","F62N",1
"lib1","SARS-CoV-2","GGTTTCCACATGCCTT",5,62.03,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S29I P82R D97Y Q144M",4
"lib1","SARS-CoV-2","GGTTTCCTCATTATTA",2,72.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5Q R16K F44H I72M T85L N120T",6
"lib1","SARS-CoV-2","GGTTTGAAGTAAGATT",5,0.35,NA,NA,NA,NA,NA,NA,"stop","T55* I72D T170P T201K",4
"lib1","SARS-CoV-2","GGTTTGACATAATGCA",7,195.05,9.26,-1.5,0.06,2.85,1.09,0,">1 nonsynonymous","Y119P E141N",2
"lib1","SARS-CoV-2","GGTTTGAGCGCCATCC",6,6.4,NA,NA,NA,NA,NA,NA,"stop","N4V L57M R78T G101L G166*",5
"lib1","SARS-CoV-2","GGTTTGAGTCACATCG",9,4.12,NA,NA,NA,NA,NA,NA,"stop","I104* S113R S164E",3
"lib1","SARS-CoV-2","GGTTTGATGATTAGGC",5,58.77,8.84,-1.92,0.21,1.63,1.16,0.02,">1 nonsynonymous","S41T A105L",2
"lib1","SARS-CoV-2","GGTTTGCGTACATAAT",3,11.25,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","GGTTTGGAAAGAATCA",3,31.02,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G86V G116L",2
"lib1","SARS-CoV-2","GGTTTGGAGAAGTTAA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K V103G G166M",3
"lib1","SARS-CoV-2","GGTTTGGATTTAGGTA",1,14.06,9.6,-1.17,0.18,2.54,1.22,0.02,">1 nonsynonymous","Q176H K199E",2
"lib1","SARS-CoV-2","GGTTTGTCGTCACACT",11,47.74,6.53,-4.24,0.64,1.5,1.18,0.04,">1 nonsynonymous","S36N A67Y V103P",3
"lib1","SARS-CoV-2","GGTTTGTTATCCCGTC",1,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N K56G F156S Y178H L188Y",5
"lib1","SARS-CoV-2","GGTTTGTTGCTGTTTG",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E F44S F99D V173Q",4
"lib1","SARS-CoV-2","GGTTTGTTTAACAATA",7,28.3,7.09,-3.67,0.38,1.5,1.12,0.04,">1 nonsynonymous","N92G V103W T170N T201C",4
"lib1","SARS-CoV-2","GGTTTGTTTTTTCGAG",19,191.74,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6S D97I Y159W P177I",4
"lib1","SARS-CoV-2","GGTTTTAAACACGATG",1,13.13,10.79,0.02,0.05,2.93,1,0,">1 nonsynonymous","F62M L122F",2
"lib1","SARS-CoV-2","GGTTTTAAATATATGG",11,44.33,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F12K N157T",2
"lib1","SARS-CoV-2","GGTTTTAAGACACTCA",8,88.43,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F12K K94E F99W T201S",4
"lib1","SARS-CoV-2","GGTTTTAAGATTACAT",2,26.44,7.89,-2.87,0.35,1.5,1.11,0.06,">1 nonsynonymous","A67C E135M G166E",3
"lib1","SARS-CoV-2","GGTTTTAATAAAAATA",5,36.55,10.54,-0.23,0.07,2.8,1.08,0,">1 nonsynonymous","A33P T148I",2
"lib1","SARS-CoV-2","GGTTTTATACAGGCCG",1,36.71,8.72,-2.04,0.2,1.82,1.12,0.01,">1 nonsynonymous","D97T G116C G155M",3
"lib1","SARS-CoV-2","GGTTTTATGGCTATAA",1,23.96,10.7,-0.07,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GGTTTTATGTGGAGTT",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E F70A G146R",3
"lib1","SARS-CoV-2","GGTTTTCACCCTACAC",1,27.04,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","GGTTTTCCAGAGCACA",3,35.21,6,-4.76,2,3,1.18,0,">1 nonsynonymous","E10Y A105V G117C",3
"lib1","SARS-CoV-2","GGTTTTGATATGAACT",4,0,NA,NA,NA,NA,NA,NA,"stop","N1* T55S I80* K114T",4
"lib1","SARS-CoV-2","GGTTTTTACACTAAAC",1,39.75,10.66,-0.1,0.07,2.93,1.06,0,">1 nonsynonymous","F47V S200H",2
"lib1","SARS-CoV-2","GTAAAAAAAAAAGCGA",9,57.18,6.39,-4.38,0.65,1.5,1.25,0.04,">1 nonsynonymous","V71Y N130D P149S",3
"lib1","SARS-CoV-2","GTAAAAAAAAGGGTAA",3,55.96,10.59,-0.17,0.06,2.92,1,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","GTAAAAAAAAGTAGAG",5,56.6,10.12,-0.64,0.06,2.75,1.08,0,">1 nonsynonymous","V37G Y66A",2
"lib1","SARS-CoV-2","GTAAAAAAATACTCAG",3,18.94,10.13,-0.63,0.06,2.89,1.01,0,"1 nonsynonymous","C31I",1
"lib1","SARS-CoV-2","GTAAAAAAATGATGGG",4,3.12,NA,NA,NA,NA,NA,NA,"stop","C6Y F12I S41* P82A A192I",5
"lib1","SARS-CoV-2","GTAAAAAAATTATGCG",4,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N A89T G174S",3
"lib1","SARS-CoV-2","GTAAAAAACAAGACCA",1,30.99,7.88,-2.88,0.22,1.67,1.15,0.01,">1 nonsynonymous","L5F C6S G117K T140R",4
"lib1","SARS-CoV-2","GTAAAAAACATACTTG",1,72.31,9.88,-0.88,0.11,2.28,1.04,0.01,">1 nonsynonymous","N30V E141S",2
"lib1","SARS-CoV-2","GTAAAAAACGTTTCGC",2,11.06,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","V37C A89R P161L",3
"lib1","SARS-CoV-2","GTAAAAAAGCCTAACG",2,113.07,8.54,-2.22,0.13,2.84,1.06,0.01,">1 nonsynonymous","D59H N157L",2
"lib1","SARS-CoV-2","GTAAAAAAGGGATTTA",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V V77Y E135R P169F",4
"lib1","SARS-CoV-2","GTAAAAAATAATTCCT",1,21.35,8.68,-2.08,0.34,1.5,1,0.06,">1 nonsynonymous","P7T D75R F99L",3
"lib1","SARS-CoV-2","GTAAAAAATACTCGGG",2,25.03,6.96,-3.8,0.5,1.5,1.05,0.05,">1 nonsynonymous","T3A N120S P161L V173S",4
"lib1","SARS-CoV-2","GTAAAAAATTATGGTT",6,20.51,10.8,0.03,0.11,2.86,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTAAAAACATTTTAAG",1,7.19,10.21,-0.56,0.18,3,1,0.01,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","GTAAAAACCACGAGTG",2,5.12,6.57,-4.19,0.5,1.89,1.21,0.03,">1 nonsynonymous","G152S Y165D",2
"lib1","SARS-CoV-2","GTAAAAACCATGATCT",2,115.71,10.65,-0.11,0.05,2.9,1.06,0,"1 nonsynonymous","D97W",1
"lib1","SARS-CoV-2","GTAAAAACCTACGCGG",5,23.4,10.43,-0.33,0.08,2.75,1.06,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","GTAAAAACGATATGAT",6,0.62,NA,NA,NA,NA,NA,NA,"stop","K56* P133D G146P",3
"lib1","SARS-CoV-2","GTAAAAACTAAAATAC",3,42.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16I Y35N A42L D112W G155L G174P",6
"lib1","SARS-CoV-2","GTAAAAACTAATACGC",6,211.24,10.67,-0.09,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAAAACTACGCACC",3,9.46,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","T46P L60W Y121K",3
"lib1","SARS-CoV-2","GTAAAAACTACTTCCT",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39M L60R V103R",3
"lib1","SARS-CoV-2","GTAAAAAGCATACTAT",3,28.02,9.21,-1.56,0.22,1.5,1.09,0.02,">1 nonsynonymous","S53L L60V F99L",3
"lib1","SARS-CoV-2","GTAAAAAGGACGCAGC",3,5.23,NA,NA,NA,NA,NA,NA,"stop","I88* R124G G166Q",3
"lib1","SARS-CoV-2","GTAAAAAGTCGGGGCG",10,57.18,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L5V D59W A81S L183C",4
"lib1","SARS-CoV-2","GTAAAAAGTGCCATCG",1,19.4,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y66T K94Y P133S G174S F185I",5
"lib1","SARS-CoV-2","GTAAAAAGTTATTTAG",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L W106N R124S R136T P149F E154I",6
"lib1","SARS-CoV-2","GTAAAAATAAAACTGA",3,55.72,6.12,-4.65,1.35,1.5,1.23,0.04,">1 nonsynonymous","C102V R127W",2
"lib1","SARS-CoV-2","GTAAAAATAAAGTTTC",9,190.84,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E135C E141R N157H F167N Q176G",5
"lib1","SARS-CoV-2","GTAAAAATAGTACATA",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R S184C",2
"lib1","SARS-CoV-2","GTAAAAATATCATAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K V77T N118S",3
"lib1","SARS-CoV-2","GTAAAAATCCTAAAAA",1,7.78,10.76,0,0.06,2.95,1.04,0,">1 nonsynonymous","S41N L60N T85S F160Y",4
"lib1","SARS-CoV-2","GTAAAAATCGCCGTTC",1,86.94,10.76,0,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAAAATGAATCTGG",1,16.57,8.56,-2.21,0.14,2.67,1.05,0.01,">1 nonsynonymous","A81H N157G",2
"lib1","SARS-CoV-2","GTAAAAATGAGCGTTC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S45F Y50C G146* G152*",4
"lib1","SARS-CoV-2","GTAAAAATTAAATAGA",2,7.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5Q F99V P161L Y178S",4
"lib1","SARS-CoV-2","GTAAAAATTAGCGCAT",8,72.32,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L5D Y66S K87T L131P T170M",5
"lib1","SARS-CoV-2","GTAAAAATTTCTGAAA",3,41.15,10.21,-0.56,0.06,2.79,1.04,0,">1 nonsynonymous","A14L T201S",2
"lib1","SARS-CoV-2","GTAAAACAATCTGAAT",4,54.26,8.15,-2.61,0.18,1.83,1.14,0.01,">1 nonsynonymous","T85R Y165E",2
"lib1","SARS-CoV-2","GTAAAACACGCCTAGT",11,25.66,7.95,-2.81,0.31,1.5,1.26,0.03,">1 nonsynonymous","N13G N107V",2
"lib1","SARS-CoV-2","GTAAAACACTCATATC",4,25.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S19T K56P F70S D98I",4
"lib1","SARS-CoV-2","GTAAAACAGGAACGAA",3,67.97,8.55,-2.22,0.08,2.94,1.04,0,">1 nonsynonymous","T85N S113N",2
"lib1","SARS-CoV-2","GTAAAACCCATAACCG",4,55.09,6.13,-4.63,0.4,1.5,1.17,0.01,">1 nonsynonymous","R16G A89R P133T P149S",4
"lib1","SARS-CoV-2","GTAAAACCTGGCAGCA",5,13.3,6.93,-3.83,0.39,3,1.14,0.04,">1 nonsynonymous","A14I A18S D90E V103K P169S",5
"lib1","SARS-CoV-2","GTAAAACCTTCTTTTA",1,14.67,10.64,-0.12,0.07,2.99,1,0,">1 nonsynonymous","N58F L122R",2
"lib1","SARS-CoV-2","GTAAAACGATAAATAG",12,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74R L122E",2
"lib1","SARS-CoV-2","GTAAAACGCACCGGTT",8,43.77,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C49K S129I T201K",3
"lib1","SARS-CoV-2","GTAAAACGGTCCTCAA",9,55.24,6.69,-4.08,0.62,1.5,1.06,0.05,"1 nonsynonymous","F167D",1
"lib1","SARS-CoV-2","GTAAAACGTGGGGCGC",1,8.15,6,-4.76,1.43,3,1.27,0.02,">1 nonsynonymous","S43H K87D R127V F185I",4
"lib1","SARS-CoV-2","GTAAAACTAAACAGGT",2,39.6,10.81,0.05,0.09,2.9,1,0,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","GTAAAACTAACTAGAT",1,16.19,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E10I C49S P82Y K132C",4
"lib1","SARS-CoV-2","GTAAAACTAATAACGA",2,38.72,6.71,-4.05,0.42,1.5,1.13,0.03,">1 nonsynonymous","S41I A81L F160E G172W",4
"lib1","SARS-CoV-2","GTAAAACTAGTCACAA",4,88.5,10.67,-0.1,0.08,2.83,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAAACTATATGCCA",4,8.45,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10L K26H G51S C61W T85N",5
"lib1","SARS-CoV-2","GTAAAACTATTACACT",1,11.09,8.98,-1.78,0.32,2.26,1,0.02,">1 nonsynonymous","I2Q L125S P161N",3
"lib1","SARS-CoV-2","GTAAAACTCGTGACCG",3,20.75,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T85S R124D",2
"lib1","SARS-CoV-2","GTAAAACTGCGGGTGT",3,35.49,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N4L W106S C150N",3
"lib1","SARS-CoV-2","GTAAAACTGTTTCTTG",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V S41I G155Q",3
"lib1","SARS-CoV-2","GTAAAACTTTATTTCA",1,13.62,10.75,-0.01,0.08,2.92,1.07,0,"1 nonsynonymous","S200N",1
"lib1","SARS-CoV-2","GTAAAAGAACTTATCC",6,88.82,10.2,-0.56,0.07,2.62,1.01,0,">1 nonsynonymous","G51S L60R",2
"lib1","SARS-CoV-2","GTAAAAGAAGTTCCCC",3,48.23,10.74,-0.02,0.04,2.91,1.04,0,"1 nonsynonymous","G196R",1
"lib1","SARS-CoV-2","GTAAAAGACCACATAA",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q N157M",2
"lib1","SARS-CoV-2","GTAAAAGAGATGAGAG",2,19.48,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N58G L95N Y121I",3
"lib1","SARS-CoV-2","GTAAAAGAGATTAAAG",6,13.51,9.98,-0.78,0.17,2.24,1.13,0.02,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","GTAAAAGATATAACCA",4,54.12,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y91L G146W V173T",3
"lib1","SARS-CoV-2","GTAAAAGATGAACACC",7,103.25,9.82,-0.95,0.06,2.85,1.07,0,">1 nonsynonymous","A81Q N120R Y175H",3
"lib1","SARS-CoV-2","GTAAAAGATGTGAAAG",7,99.48,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C31R G86L L95W V182L",4
"lib1","SARS-CoV-2","GTAAAAGCACTAGAGA",3,40.46,10.23,-0.53,0.07,2.86,1.05,0,">1 nonsynonymous","N1S S19N",2
"lib1","SARS-CoV-2","GTAAAAGCCAGGCATG",8,139.03,9.54,-1.22,0.08,2.46,1.06,0,">1 nonsynonymous","S29A V37N V65A Y121I",4
"lib1","SARS-CoV-2","GTAAAAGCTAAATTGA",6,0.37,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","GTAAAAGGACCGCTGG",3,12.13,8.68,-2.08,0.51,1.57,1.3,0.07,">1 nonsynonymous","G9S W23V T201C",3
"lib1","SARS-CoV-2","GTAAAAGTAATAGCAT",7,36.47,6.91,-3.85,0.39,1.5,1.09,0.03,">1 nonsynonymous","T63R K94I",2
"lib1","SARS-CoV-2","GTAAAAGTCAAATATT",2,16,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6G S41V G86N D98G E141N N151T",6
"lib1","SARS-CoV-2","GTAAAATAAACCGAGA",4,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119S R124Y T201S",3
"lib1","SARS-CoV-2","GTAAAATAAGCGAGAT",5,0.73,NA,NA,NA,NA,NA,NA,"stop","A42L T63I G86N F160* S200V",5
"lib1","SARS-CoV-2","GTAAAATAATACTCGA",2,43.93,10.78,0.01,0.07,2.86,1.07,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","GTAAAATAATTCGAAA",5,73.51,10.22,-0.55,0.05,2.93,1,0,"1 nonsynonymous","F126V",1
"lib1","SARS-CoV-2","GTAAAATACAAGTGTG",6,40.52,10.73,-0.03,0.07,2.81,1.11,0,">1 nonsynonymous","K132E S200N",2
"lib1","SARS-CoV-2","GTAAAATAGTACAACA",9,125.85,10.19,-0.58,0.09,2.56,1,0,">1 nonsynonymous","N58L P133G",2
"lib1","SARS-CoV-2","GTAAAATATAAAACAA",5,63.71,10.47,-0.3,0.03,2.9,1.05,0,"1 nonsynonymous","K132P",1
"lib1","SARS-CoV-2","GTAAAATATATGACTT",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36A E135T",2
"lib1","SARS-CoV-2","GTAAAATCACACCCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142K",1
"lib1","SARS-CoV-2","GTAAAATCAGGATAAA",3,30.9,6.35,-4.41,0.71,1.5,1.12,0.04,">1 nonsynonymous","I88D T100Q E141C P197N",4
"lib1","SARS-CoV-2","GTAAAATCATGATTGT",3,35.4,8.01,-2.75,0.2,1.5,1.12,0.02,">1 nonsynonymous","V11D Y119M",2
"lib1","SARS-CoV-2","GTAAAATCGGTTTTAA",3,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y D68Y D97W G146D G155T T201A",6
"lib1","SARS-CoV-2","GTAAAATCTAGAGGCC",2,14.57,9.14,-1.62,0.19,1.85,1.11,0.02,">1 nonsynonymous","G9F C61H A105I T193I",4
"lib1","SARS-CoV-2","GTAAAATGAAAAACGT",2,39.81,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9I A33G F44S P96L F134A Q168R",6
"lib1","SARS-CoV-2","GTAAAATGATTTGGGT",1,24.81,10.19,-0.57,0.1,2.74,1.03,0,">1 nonsynonymous","T15L N171I",2
"lib1","SARS-CoV-2","GTAAAATGCAGACAGG",3,30.9,6.15,-4.61,0.86,1.5,1.16,0.03,">1 nonsynonymous","D90H F99L I142S T201F",4
"lib1","SARS-CoV-2","GTAAAATGGCGAGACT",4,232.28,9.92,-0.84,0.1,1.89,1.09,0,">1 nonsynonymous","K26E N64T V153Y",3
"lib1","SARS-CoV-2","GTAAAATGTCATCGAC",5,1.64,NA,NA,NA,NA,NA,NA,"stop","F44T L57E Q84N G155W R179*",5
"lib1","SARS-CoV-2","GTAAAATGTGCTTAAG",2,37.15,10.71,-0.05,0.06,2.92,1.02,0,">1 nonsynonymous","F160L T201L",2
"lib1","SARS-CoV-2","GTAAAATTAAACCGAC",6,82.16,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C31L I80E A89M",3
"lib1","SARS-CoV-2","GTAAAATTATGAACTA",2,65.98,10.4,-0.36,0.06,2.95,1.01,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","GTAAAATTATTATAAG",4,1.5,NA,NA,NA,NA,NA,NA,"stop","I2F D68* P96T E154S",4
"lib1","SARS-CoV-2","GTAAAATTCTACGGTC",3,20.49,10.87,0.11,0.05,2.96,1.03,0,">1 nonsynonymous","T46H L122R",2
"lib1","SARS-CoV-2","GTAAAATTCTGCGACT",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N R73M Y175S",3
"lib1","SARS-CoV-2","GTAAAATTGTGGTTAT",5,19.62,6,-4.76,0.53,2.09,1.2,0,">1 nonsynonymous","S41V E154K F167I F185M",4
"lib1","SARS-CoV-2","GTAAAATTTGATTCTC",4,21.92,6,-4.76,0.94,3,1.14,0.01,">1 nonsynonymous","Q84A T170M V182M K198G",4
"lib1","SARS-CoV-2","GTAAACAAACCGCCAA",5,14.7,9.91,-0.86,0.12,1.91,1.08,0,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","GTAAACAAATAGTCTA",4,3.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57G",1
"lib1","SARS-CoV-2","GTAAACAACATGTAAA",1,64.73,10.83,0.06,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAACAAGAACCAAT",3,14.01,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5R N58Y T85D D112E K128F",5
"lib1","SARS-CoV-2","GTAAACAATAGGCGCC",6,66.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12N V77L L122K Y175L",4
"lib1","SARS-CoV-2","GTAAACAATTACTATC",4,0.41,NA,NA,NA,NA,NA,NA,"stop","G51M L95*",2
"lib1","SARS-CoV-2","GTAAACACAACGATGA",1,1.36,NA,NA,NA,NA,NA,NA,"stop","G9E N107Y S129T T148L L187*",5
"lib1","SARS-CoV-2","GTAAACACAATGATCC",8,146.01,10.22,-0.55,0.04,2.8,1.02,0,">1 nonsynonymous","F47C N130S I142V",3
"lib1","SARS-CoV-2","GTAAACACCTCTTCTA",7,127.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I142R Y175K",2
"lib1","SARS-CoV-2","GTAAACACTAACACAA",7,211.28,10.17,-0.6,0.05,2.79,1.01,0,"1 nonsynonymous","L57Y",1
"lib1","SARS-CoV-2","GTAAACACTCTATGCA",4,31.1,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C49A R78A I88G L162M Y175C",5
"lib1","SARS-CoV-2","GTAAACAGCAATGTAA",2,35.62,8.59,-2.17,0.15,2.19,1.12,0.01,">1 nonsynonymous","S45P Y119V N151L",3
"lib1","SARS-CoV-2","GTAAACAGTACGTACG",2,0.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","GTAAACAGTAGCAGAT",2,9.01,10.78,0.02,0.27,2.65,1.15,0.02,">1 nonsynonymous","T55H Q84T",2
"lib1","SARS-CoV-2","GTAAACAGTTAGATAC",4,27.03,10.54,-0.23,0.06,2.94,1,0,">1 nonsynonymous","T63L K132E E141Q",3
"lib1","SARS-CoV-2","GTAAACATAACGGTAC",7,41.79,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","A89I D112Y T170Y",3
"lib1","SARS-CoV-2","GTAAACATAAGAAGGC",10,132.08,10.77,0.01,0.06,2.89,1.06,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","GTAAACATATGCCTCC",1,39.91,10.45,-0.32,0.07,2.88,1,0,">1 nonsynonymous","D34S F160H",2
"lib1","SARS-CoV-2","GTAAACATGCCGCACA",3,25.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V115D F134Y I142R C158E T201M",5
"lib1","SARS-CoV-2","GTAAACATTGAACGGG",9,79.6,8.61,-2.15,0.17,1.5,1.07,0.01,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","GTAAACCAACAAAAAG",4,38.72,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K94P K114L Y123P",3
"lib1","SARS-CoV-2","GTAAACCACCTAATAC",5,48.17,6.25,-4.52,0.51,1.5,1.2,0.01,">1 nonsynonymous","P82G V103C C150Y",3
"lib1","SARS-CoV-2","GTAAACCAGCTACGCA",2,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F A42R C61S A81D N130S P197H",6
"lib1","SARS-CoV-2","GTAAACCCGGTCAGCG",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V E154Y",2
"lib1","SARS-CoV-2","GTAAACCGACAAGAAC",1,0.25,NA,NA,NA,NA,NA,NA,"stop","S19* R73E P96H F167N",4
"lib1","SARS-CoV-2","GTAAACCGCTCCGCGT",3,156.56,10.74,-0.03,0.11,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAACCTCGACACAA",17,145.04,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I28R D97K K114V D137P",4
"lib1","SARS-CoV-2","GTAAACCTTCATAGCC",10,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25Q K94Q E141Y",3
"lib1","SARS-CoV-2","GTAAACCTTGATTAGG",3,6.95,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12K T85W",2
"lib1","SARS-CoV-2","GTAAACGAAACATCCG",6,242.91,10.08,-0.69,0.04,2.89,1.03,0,">1 nonsynonymous","Y119R T148E",2
"lib1","SARS-CoV-2","GTAAACGACGTTATGT",3,15.95,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V103S F167H",2
"lib1","SARS-CoV-2","GTAAACGAGCATACTA",2,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I Y35P G74D T100K C150Y",5
"lib1","SARS-CoV-2","GTAAACGCATGCAGAT",1,35.29,7.15,-3.61,0.19,1.79,1.12,0.01,">1 nonsynonymous","A42K N58P C158H K199L",4
"lib1","SARS-CoV-2","GTAAACGCGCTAGGCA",2,15.25,8.68,-2.08,0.23,2.98,1.08,0.03,">1 nonsynonymous","T3E F126S",2
"lib1","SARS-CoV-2","GTAAACGCGGATTTGT",4,6.03,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D59M T85Q L122P C158S",4
"lib1","SARS-CoV-2","GTAAACGCTGAAGTAT",3,34.03,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","D34L L38S D75Y R127S",4
"lib1","SARS-CoV-2","GTAAACGGGTACAAAT",2,1.18,NA,NA,NA,NA,NA,NA,"stop","F12N Y123V E135K F167* Q176I",5
"lib1","SARS-CoV-2","GTAAACGTCAGGAGTG",4,59.95,10.65,-0.11,0.07,2.93,1.05,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GTAAACGTTTGTTTAT",14,92.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11C I80Q P96Y V115G",4
"lib1","SARS-CoV-2","GTAAACGTTTTGGAAT",2,18.86,9.91,-0.86,0.23,1.99,1.09,0.01,">1 nonsynonymous","A14E K26W",2
"lib1","SARS-CoV-2","GTAAACTAATATCTAT",3,13.81,8.38,-2.38,0.21,1.5,1.06,0.02,">1 nonsynonymous","A89F A145M",2
"lib1","SARS-CoV-2","GTAAACTACAACCGCT",3,13.26,11.04,0.27,0.16,2.95,1.01,0.01,"1 nonsynonymous","C195F",1
"lib1","SARS-CoV-2","GTAAACTGAAACAAAC",11,6.45,NA,NA,NA,NA,NA,NA,"stop","E10* V37D A190S",3
"lib1","SARS-CoV-2","GTAAACTTATCGAATA",3,89.62,8.75,-2.02,0.14,1.66,1.15,0.01,">1 nonsynonymous","W23E R78P",2
"lib1","SARS-CoV-2","GTAAACTTGCTGGAAA",3,128.43,10.13,-0.64,0.07,2.76,1.01,0,">1 nonsynonymous","R27T Y91V",2
"lib1","SARS-CoV-2","GTAAACTTGGTAGGAA",3,36.67,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","Y119I E141S C158Q",3
"lib1","SARS-CoV-2","GTAAACTTTATATATA",1,26.51,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","G86Y R136S V173S",3
"lib1","SARS-CoV-2","GTAAACTTTGCCTCTG",4,57.82,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R27T S69H N157P A190T",4
"lib1","SARS-CoV-2","GTAAACTTTTGGGCAC",3,101.74,10.37,-0.4,0.04,2.83,1.08,0,"1 nonsynonymous","N107P",1
"lib1","SARS-CoV-2","GTAAAGAAATACTAAC",3,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P E186Y",2
"lib1","SARS-CoV-2","GTAAAGAAATGATTAT",3,0.97,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib1","SARS-CoV-2","GTAAAGAATTCCCCTG",2,35.54,10.08,-0.69,0.05,3,1.01,0,"1 nonsynonymous","E154I",1
"lib1","SARS-CoV-2","GTAAAGACACCAGACA",2,62.38,10.61,-0.16,0.04,2.92,1.01,0,">1 nonsynonymous","L5R F62L E141Q",3
"lib1","SARS-CoV-2","GTAAAGACTATAGAAT",3,45.89,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S29T I80S",2
"lib1","SARS-CoV-2","GTAAAGACTGTACACA",6,45.01,8.58,-2.19,0.3,1.5,1.25,0.03,">1 nonsynonymous","F17Y N40T K56I E141L S200E",5
"lib1","SARS-CoV-2","GTAAAGAGGAAAGCAT",1,16.3,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","P7Y L95F L122S Q176L",4
"lib1","SARS-CoV-2","GTAAAGAGTGCGAACA",3,23.36,10.4,-0.36,0.08,2.89,1,0,">1 nonsynonymous","V37I L125A",2
"lib1","SARS-CoV-2","GTAAAGATGCTTATTA",11,81.57,8.54,-2.22,0.13,2.25,1.14,0.01,">1 nonsynonymous","N40L Y119V S129F",3
"lib1","SARS-CoV-2","GTAAAGATGTAAGACC",2,10.85,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N58C C102M E135N Y159N S200D",5
"lib1","SARS-CoV-2","GTAAAGCAACGCCTCG",3,8.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81Y A105D V173L",3
"lib1","SARS-CoV-2","GTAAAGCAATCTCGAC",5,13.61,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P7Q V77N D97G W106C L162K",5
"lib1","SARS-CoV-2","GTAAAGCACATATACT",5,59.16,9.75,-1.01,0.13,1.84,1.1,0.01,">1 nonsynonymous","N13A A22L",2
"lib1","SARS-CoV-2","GTAAAGCACCTCCAAA",2,21.54,7.59,-3.18,0.26,1.5,1,0.03,">1 nonsynonymous","C102R D137S Y165H N171K",4
"lib1","SARS-CoV-2","GTAAAGCCATTTGGGT",7,59.3,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T46Q D68L Q84R G146S G152P S184A",6
"lib1","SARS-CoV-2","GTAAAGCCTCTAATAT",8,40.02,7.29,-3.48,0.41,1.5,1.03,0.04,">1 nonsynonymous","I2S V103S",2
"lib1","SARS-CoV-2","GTAAAGCCTTTAAGAA",4,207.57,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","G9C Y21C V77L D90N G117Q P197N",6
"lib1","SARS-CoV-2","GTAAAGCGATGCCACC",3,7.8,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A89R C102S",2
"lib1","SARS-CoV-2","GTAAAGCGATTCTATG",4,64.61,10.47,-0.29,0.05,2.83,1.06,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","GTAAAGCGGCAAATAG",8,182.99,9.64,-1.12,0.08,2.76,1.06,0,">1 nonsynonymous","D97I K114G S129F",3
"lib1","SARS-CoV-2","GTAAAGCTAAAACGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N110K N120* S129D P149L T201S",5
"lib1","SARS-CoV-2","GTAAAGCTGGCAGTAA",6,45.07,7.41,-3.35,0.21,1.6,1.09,0.02,">1 nonsynonymous","I28M C150L",2
"lib1","SARS-CoV-2","GTAAAGCTTAAAGGAT",2,71.45,8.69,-2.07,0.15,1.51,1.14,0.01,">1 nonsynonymous","C31T D97C V181I",3
"lib1","SARS-CoV-2","GTAAAGCTTAAATATT",10,214.14,8.7,-2.07,0.08,2.84,1.1,0,">1 nonsynonymous","L5P R73E V115K",3
"lib1","SARS-CoV-2","GTAAAGGACACACTTA",5,18,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G86W Y123T Q176K S184L",4
"lib1","SARS-CoV-2","GTAAAGGGACCGCGGT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","P96T Y178* K199I",3
"lib1","SARS-CoV-2","GTAAAGGGTCAAATTG",13,140.14,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31R K56S T148S Q168P",4
"lib1","SARS-CoV-2","GTAAAGGGTGCTTGAA",2,47.12,10.31,-0.46,0.06,2.82,1.06,0,"1 nonsynonymous","N40C",1
"lib1","SARS-CoV-2","GTAAAGTAAGCAATGG",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S Y35N F62L D68V T100L S129I I138A",7
"lib1","SARS-CoV-2","GTAAAGTAATTGCATC",1,25.17,10.72,-0.05,0.06,2.92,1,0,"1 nonsynonymous","T15E",1
"lib1","SARS-CoV-2","GTAAAGTCACCACCAA",8,173.99,10.15,-0.61,0.04,2.9,1.02,0,">1 nonsynonymous","T3N E154I",2
"lib1","SARS-CoV-2","GTAAAGTCATATCAAA",4,33.93,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Y91D V103M P133T K198R",4
"lib1","SARS-CoV-2","GTAAAGTGAAATACGC",3,3.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTAAAGTGAAATAGGG",2,0.32,NA,NA,NA,NA,NA,NA,"stop","I138* P161T",2
"lib1","SARS-CoV-2","GTAAAGTGATCCATGA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","E10W C49V I104* P177F",4
"lib1","SARS-CoV-2","GTAAAGTTCCCTAAAT",1,38.26,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","P7I D34I S41A G51K N64C R78Y V103R",7
"lib1","SARS-CoV-2","GTAAATAAAGAGTTAC",1,9.15,7.09,-3.68,0.56,1.5,1.1,0.08,">1 nonsynonymous","S36I D98F Y165N",3
"lib1","SARS-CoV-2","GTAAATAAATGTGCAA",10,100.16,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N1R C6I R25L C61R L188V",5
"lib1","SARS-CoV-2","GTAAATAACCATGGCT",5,77.67,9.2,-1.57,0.06,2.92,1.1,0,">1 nonsynonymous","N118T F156I",2
"lib1","SARS-CoV-2","GTAAATAACGCGAGCA",4,43.33,6.68,-4.08,0.24,1.5,1.14,0.01,">1 nonsynonymous","S45A Y91S N107S",3
"lib1","SARS-CoV-2","GTAAATAAGTCCACTG",1,1.45,NA,NA,NA,NA,NA,NA,"stop","D75E Q79* A89F",3
"lib1","SARS-CoV-2","GTAAATAATAAATATG",8,67.33,6,-4.76,2,2.7,1.19,0,"1 nonsynonymous","R124L",1
"lib1","SARS-CoV-2","GTAAATAATATAAATA",1,17.74,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D90F D112M P161R P177L",4
"lib1","SARS-CoV-2","GTAAATAATCATCGCT",4,48.85,8.87,-1.89,0.18,1.5,1.19,0.01,">1 nonsynonymous","I2P E10I P169R F185I",4
"lib1","SARS-CoV-2","GTAAATAATCGAAAAT",6,53.66,10.66,-0.11,0.05,2.94,1.01,0,">1 nonsynonymous","N4D P149F",2
"lib1","SARS-CoV-2","GTAAATACACTTCTTA",6,71.9,10.82,0.05,0.07,2.81,1.04,0,">1 nonsynonymous","S45R L122K",2
"lib1","SARS-CoV-2","GTAAATACAGCTCATA",3,39.37,6.23,-4.53,0.44,1.5,1.14,0.01,">1 nonsynonymous","P82Y F99S",2
"lib1","SARS-CoV-2","GTAAATACATAAGCGC",4,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G F62Y N118V Q144W",4
"lib1","SARS-CoV-2","GTAAATACATACTTAC",1,12.52,10.79,0.02,0.13,3,1.01,0.01,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","GTAAATACATTCAAGC",6,31.55,6,-4.76,2,2.52,1.21,0.01,">1 nonsynonymous","R124Y Q163R Q168D",3
"lib1","SARS-CoV-2","GTAAATACATTGGTCA",3,97.07,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L60S F70S N92Q Y178T T201R",5
"lib1","SARS-CoV-2","GTAAATACCGAAACCT",1,39.96,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F70P P161R",2
"lib1","SARS-CoV-2","GTAAATACGTATACCA",7,1.38,NA,NA,NA,NA,NA,NA,"stop","D34* G196K",2
"lib1","SARS-CoV-2","GTAAATACTAAAGAAA",5,83.83,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A67T G86D Y119N",3
"lib1","SARS-CoV-2","GTAAATACTAGAACGC",3,24.75,9.18,-1.58,0.27,1.69,1.22,0.03,">1 nonsynonymous","A22W G152I",2
"lib1","SARS-CoV-2","GTAAATACTAGTGAAC",6,117.45,10.8,0.04,0.07,2.87,1.08,0,">1 nonsynonymous","K128D K198S",2
"lib1","SARS-CoV-2","GTAAATAGAATCCGCT",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35N A89G S129* Q176V",4
"lib1","SARS-CoV-2","GTAAATAGAATTATTA",1,7.67,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S69L G74C",2
"lib1","SARS-CoV-2","GTAAATAGACAAATGG",5,74.21,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y66D N120W Y143G",3
"lib1","SARS-CoV-2","GTAAATAGACTTGTTT",1,14.96,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y50I P82C F126T",3
"lib1","SARS-CoV-2","GTAAATAGCGCAGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* A89C T100H E135V",4
"lib1","SARS-CoV-2","GTAAATATAATTATTG",5,104,9.44,-1.32,0.12,1.86,1.09,0.01,">1 nonsynonymous","G9L F17L G116N S200I",4
"lib1","SARS-CoV-2","GTAAATATCATTCGAG",1,21.1,10.6,-0.17,0.05,2.94,1.05,0,"1 nonsynonymous","N40M",1
"lib1","SARS-CoV-2","GTAAATATGAACATTG",3,65.22,10.46,-0.3,0.04,2.88,1.03,0,">1 nonsynonymous","K56L Y121L",2
"lib1","SARS-CoV-2","GTAAATATGGGAACAG",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C Y93L G117N",3
"lib1","SARS-CoV-2","GTAAATATTAACTAAT",11,21.85,6.13,-4.63,1.22,1.5,1.24,0.04,">1 nonsynonymous","F62L P96I G146K N151L",4
"lib1","SARS-CoV-2","GTAAATATTAACTCGC",2,10.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C49T L125I P149W G174P",4
"lib1","SARS-CoV-2","GTAAATCACGCTCAAA",1,55.35,10.69,-0.08,0.07,2.98,1,0,">1 nonsynonymous","I2T N130F",2
"lib1","SARS-CoV-2","GTAAATCACGTCGTCC",1,13.71,6,-4.76,1.69,1.5,1.12,0.01,">1 nonsynonymous","C49R N58R G152M R179V",4
"lib1","SARS-CoV-2","GTAAATCAGTAATAAA",8,8.46,NA,NA,NA,NA,NA,NA,"stop","V20L L131*",2
"lib1","SARS-CoV-2","GTAAATCAGTTAAACC",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16G G51I V77W A81M P161S H189E",6
"lib1","SARS-CoV-2","GTAAATCCAAGCACAG",1,8.9,9.64,-1.12,0.23,2.06,1.12,0.03,">1 nonsynonymous","C6N K48R V194I T201I",4
"lib1","SARS-CoV-2","GTAAATCCTTTTGTCT",3,26.09,6.4,-4.36,0.54,1.5,1.15,0.02,">1 nonsynonymous","L38K G83V Y93A K114L T201R",5
"lib1","SARS-CoV-2","GTAAATCGCATTACAT",3,18.79,6,-4.76,2,3,1.24,0.03,">1 nonsynonymous","I80V S113F A145S G155N",4
"lib1","SARS-CoV-2","GTAAATCGCCCTCGGT",3,28.84,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","L38K Y165L N171M",3
"lib1","SARS-CoV-2","GTAAATCTATATGACG",3,26.25,9.86,-0.9,0.1,2.49,1.01,0,">1 nonsynonymous","N40V S129I K199D",3
"lib1","SARS-CoV-2","GTAAATCTATTGCAGG",5,2.81,NA,NA,NA,NA,NA,NA,"stop","S41A N110* P169T",3
"lib1","SARS-CoV-2","GTAAATCTGAATTTTA",5,50.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14V A33E N107T",3
"lib1","SARS-CoV-2","GTAAATCTTCTAAATA",4,56.52,9.79,-0.97,0.15,1.89,1.04,0.01,">1 nonsynonymous","I2R A18S N64L N107C K114T",5
"lib1","SARS-CoV-2","GTAAATGACAAAACGC",2,36.43,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G86E Y165D",2
"lib1","SARS-CoV-2","GTAAATGAGGTTAGGG",3,109.66,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","K26R Y121P Q176F",3
"lib1","SARS-CoV-2","GTAAATGCCTGAAGAT",7,67.61,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V71Q W106V Y119I G152P",4
"lib1","SARS-CoV-2","GTAAATGCTACTTTCG",1,7.98,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","E10W K48S N58K A81Y L188K",5
"lib1","SARS-CoV-2","GTAAATGGAATAATGT",6,51.16,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36K I104K L183V",3
"lib1","SARS-CoV-2","GTAAATGGTTGATCCC",6,37.72,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","F8K Y50I V103G L125P T201A",5
"lib1","SARS-CoV-2","GTAAATGTACGATCTG",7,95.97,8.29,-2.47,0.14,2.42,1.15,0.01,"1 nonsynonymous","Y175R",1
"lib1","SARS-CoV-2","GTAAATGTATACGAAC",1,15.95,10.57,-0.19,0.08,3,1,0,">1 nonsynonymous","P54T F156W",2
"lib1","SARS-CoV-2","GTAAATGTATATCATT",3,35.32,10.56,-0.21,0.09,2.79,1.07,0,">1 nonsynonymous","E141L G196P",2
"lib1","SARS-CoV-2","GTAAATGTCCCCAATT",5,23.66,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I28N N58R P149S N157Y L183P T201L",6
"lib1","SARS-CoV-2","GTAAATGTCTTAATTG",4,69.65,10.51,-0.26,0.07,2.75,1.05,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","GTAAATGTTCACTACA",9,131.13,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I28S Q176T",2
"lib1","SARS-CoV-2","GTAAATTAAAAAGCGA",1,17.78,7.69,-3.08,0.28,1.5,1.09,0.03,">1 nonsynonymous","I104S Y119L T148D",3
"lib1","SARS-CoV-2","GTAAATTACCTTACTG",2,80.33,10.85,0.08,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAATTATTAAGTCG",3,61.01,10.44,-0.32,0.04,2.9,1.01,0,">1 nonsynonymous","Q84Y T201V",2
"lib1","SARS-CoV-2","GTAAATTCAATTCTAT",4,58.96,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y39L S69K Y165P",3
"lib1","SARS-CoV-2","GTAAATTCACCCTAGA",1,49.49,10.29,-0.47,0.06,2.9,1.03,0,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","GTAAATTGAGGCAACT",3,7.38,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","A18S F70V",2
"lib1","SARS-CoV-2","GTAAATTGATTACCGG",2,13.62,10.89,0.13,0.08,2.98,1,0,"1 nonsynonymous","S36H",1
"lib1","SARS-CoV-2","GTAAATTGCATTATTA",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S K87T G101S V153L",4
"lib1","SARS-CoV-2","GTAAATTGTGTTAACT",5,82.06,9.89,-0.87,0.13,1.93,1.07,0.01,">1 nonsynonymous","S19K R27V N40H L122H",4
"lib1","SARS-CoV-2","GTAAATTGTTATTTCA",3,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86H W106L",2
"lib1","SARS-CoV-2","GTAAATTTAGAAGCCA",7,73.5,10.33,-0.44,0.05,2.96,1,0,">1 nonsynonymous","F47V C61L",2
"lib1","SARS-CoV-2","GTAAATTTAGGCCTTA",3,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N P169F P191H",3
"lib1","SARS-CoV-2","GTAAATTTATCCTAAA",1,13.79,6,-4.76,2,3,1.06,0,">1 nonsynonymous","S19R K87V C158A Y165V Y175T",5
"lib1","SARS-CoV-2","GTAAATTTGTAGTCTA",10,107.26,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A105D F126C N151V Q176V",4
"lib1","SARS-CoV-2","GTAAATTTTAAGTAGT",2,43.29,10.28,-0.49,0.09,2.77,1.05,0,"1 nonsynonymous","V180M",1
"lib1","SARS-CoV-2","GTAAATTTTACACCCC",3,52.71,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D112P Q144V V180W",3
"lib1","SARS-CoV-2","GTAAATTTTTAAGTAG",3,9.35,9.13,-1.63,0.37,1.57,1.37,0.05,">1 nonsynonymous","S41V G51F C61Y",3
"lib1","SARS-CoV-2","GTAACAAAAAAAGTTC",4,30.62,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","P96I G117K K198I",3
"lib1","SARS-CoV-2","GTAACAAAATTCAGGA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","T3S S41G T85* Q144I",4
"lib1","SARS-CoV-2","GTAACAAACAATCGCA",3,63.38,10.07,-0.7,0.11,2.15,1.07,0.01,">1 nonsynonymous","L5W T100F F134K E141G",4
"lib1","SARS-CoV-2","GTAACAAACAGTCACA",3,50.86,9.98,-0.78,0.14,2.24,1.07,0.01,">1 nonsynonymous","L5K T140Y Y178L",3
"lib1","SARS-CoV-2","GTAACAACAAAAACTG",3,41.51,7.92,-2.84,0.37,1.5,1.08,0.05,">1 nonsynonymous","C49L N171R",2
"lib1","SARS-CoV-2","GTAACAACAACAACTT",4,25.38,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A14W F99L K114T L125S P161R",5
"lib1","SARS-CoV-2","GTAACAACACACCTAC",6,71.43,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A89S Y178G",2
"lib1","SARS-CoV-2","GTAACAACCAAACACT",1,30.85,10.67,-0.1,0.1,2.81,1.17,0.01,"1 nonsynonymous","P7N",1
"lib1","SARS-CoV-2","GTAACAACCTCCTAAT",8,128.84,6.03,-4.73,1.33,1.5,1.26,0.03,">1 nonsynonymous","I28Y N40A G51T E154Y Y178S",5
"lib1","SARS-CoV-2","GTAACAACTAATATTA",6,38.53,6.18,-4.58,0.82,1.5,1.2,0.02,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","GTAACAAGCTACAATA",4,92.75,7.87,-2.89,0.15,2,1.17,0.01,">1 nonsynonymous","G116I Y175M",2
"lib1","SARS-CoV-2","GTAACAAGGTAAGAGC",5,40.01,6.16,-4.6,0.52,1.5,1.12,0.01,">1 nonsynonymous","I88Q V103A E135N G146L",4
"lib1","SARS-CoV-2","GTAACAAGTATGTAAT",6,69.71,10.79,0.03,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAACAATATAACGCG",4,40.21,6.83,-3.94,0.5,1.5,1.16,0.06,">1 nonsynonymous","V65W F134R P161W",3
"lib1","SARS-CoV-2","GTAACAATATGGACTG",1,22.87,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","G86R G155I",2
"lib1","SARS-CoV-2","GTAACAATATTCTAAA",1,25.12,8.72,-2.04,0.16,2.29,1.1,0.01,">1 nonsynonymous","G9T C31T G166R",3
"lib1","SARS-CoV-2","GTAACAATGTTTTCGG",5,81.17,8.64,-2.12,0.06,2.54,1.11,0,">1 nonsynonymous","T85N E141V G174V",3
"lib1","SARS-CoV-2","GTAACAATTGTATCCG",4,1.36,NA,NA,NA,NA,NA,NA,"stop","Q84* G146V",2
"lib1","SARS-CoV-2","GTAACACAATCAATAT",3,40.77,8.84,-1.93,0.16,1.7,1.18,0.01,">1 nonsynonymous","S147G F185K",2
"lib1","SARS-CoV-2","GTAACACACACGTGAT",2,66.79,10.83,0.07,0.05,2.93,1.02,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","GTAACACACTATTAAG",2,31,6.39,-4.38,0.62,1.5,1.25,0.03,">1 nonsynonymous","F44G G83N V103D Y123T",4
"lib1","SARS-CoV-2","GTAACACAGCGCGACA",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S K56D G86D Y121L",4
"lib1","SARS-CoV-2","GTAACACCCCACCGAG",3,22.86,10.08,-0.68,0.1,2.34,1.02,0,">1 nonsynonymous","V77I Q84C E186G",3
"lib1","SARS-CoV-2","GTAACACCTTAGGGTA",4,14.44,9.38,-1.38,0.17,1.76,1.11,0.01,">1 nonsynonymous","A81L N120V",2
"lib1","SARS-CoV-2","GTAACACCTTATGACT",6,129.02,10.72,-0.05,0.04,2.95,1,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","GTAACACGAATCTCAT",3,55.84,6.07,-4.69,1.02,1.5,1.17,0.02,">1 nonsynonymous","Y119T R127T",2
"lib1","SARS-CoV-2","GTAACACGATACCGAT",4,42.62,10.18,-0.58,0.09,2.13,1.01,0,">1 nonsynonymous","A14P K128S",2
"lib1","SARS-CoV-2","GTAACACTAACGTCAA",4,40.9,9.77,-0.99,0.1,2,1.07,0,">1 nonsynonymous","L38T F160C",2
"lib1","SARS-CoV-2","GTAACACTATAAAATA",4,106.33,8.46,-2.3,0.1,2.92,1.07,0,">1 nonsynonymous","N40D Y143Q F160L P197I",4
"lib1","SARS-CoV-2","GTAACAGAAGAATCAA",3,58.59,10.38,-0.39,0.06,2.88,1,0,">1 nonsynonymous","T85M D97F",2
"lib1","SARS-CoV-2","GTAACAGAATTCTCTG",8,88.31,10.67,-0.09,0.05,2.89,1.06,0,"1 nonsynonymous","N151L",1
"lib1","SARS-CoV-2","GTAACAGACACAAGAA",2,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C S41M I104S C158R K199T",5
"lib1","SARS-CoV-2","GTAACAGAGACCTTCA",4,34.37,8.4,-2.36,0.14,2.74,1.11,0.01,">1 nonsynonymous","D90A G117C",2
"lib1","SARS-CoV-2","GTAACAGAGGATCGCA",11,37.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V11M C102A G146P F160W",4
"lib1","SARS-CoV-2","GTAACAGCCAATATAT",1,51.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14S S53P D97R P133L P149D G155N",6
"lib1","SARS-CoV-2","GTAACAGCGCTTAAAA",2,40.57,10.57,-0.19,0.07,2.86,1.06,0,">1 nonsynonymous","V37F Y91A K128T",3
"lib1","SARS-CoV-2","GTAACAGGTAGGTTAC",1,0.4,NA,NA,NA,NA,NA,NA,"stop","S113G Y143*",2
"lib1","SARS-CoV-2","GTAACAGGTGTAATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V11* R16Y F47S V103S",4
"lib1","SARS-CoV-2","GTAACAGTCAATCGCG",2,11.11,10.91,0.15,0.16,2.84,1.09,0.02,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","GTAACATAAAAAAATT",1,14.36,10.02,-0.74,0.2,2.3,1.1,0.02,">1 nonsynonymous","P7W Y66H",2
"lib1","SARS-CoV-2","GTAACATAACGGCTGT",3,56.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78Y P82W",2
"lib1","SARS-CoV-2","GTAACATATACTAAAC",8,9.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22S T85H D90S P96R",4
"lib1","SARS-CoV-2","GTAACATATTCTTGAC",3,30.51,10.77,0.01,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAACATCTGTGCCAA",2,124.81,10.76,0,0.04,2.89,1.07,0,">1 nonsynonymous","G9W P197T",2
"lib1","SARS-CoV-2","GTAACATGGGATTGAG",3,38.71,10.39,-0.37,0.05,2.94,1.04,0,">1 nonsynonymous","P7G D90S",2
"lib1","SARS-CoV-2","GTAACATTAAAAGTTC",1,61.89,9.67,-1.09,0.1,2.54,1.08,0,">1 nonsynonymous","G51S P169I",2
"lib1","SARS-CoV-2","GTAACATTACCATTTA",4,82.82,6.16,-4.6,0.91,1.5,1.22,0.03,">1 nonsynonymous","V52R Y121W",2
"lib1","SARS-CoV-2","GTAACATTATACGAGG",3,6.47,6.7,-4.07,0.65,1.5,1.05,0.03,">1 nonsynonymous","L5I S19V S41V I88G",4
"lib1","SARS-CoV-2","GTAACCAAAATCTCAG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib1","SARS-CoV-2","GTAACCAACGAAAAAA",6,153.61,10.67,-0.1,0.04,2.92,1.05,0,"1 nonsynonymous","E141R",1
"lib1","SARS-CoV-2","GTAACCAACGGTGTCA",2,19.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y66P P133T N151E",3
"lib1","SARS-CoV-2","GTAACCAACTAAGACA",1,25.26,10.05,-0.71,0.08,3,1,0,">1 nonsynonymous","L5R Y39V L57N K198T",4
"lib1","SARS-CoV-2","GTAACCAAGAGAATGA",5,21.95,6,-4.76,1.56,2.63,1.16,0,">1 nonsynonymous","D59P L122H T148M R179N",4
"lib1","SARS-CoV-2","GTAACCAAGCTCGGTG",9,334.94,8.94,-1.83,0.15,1.5,1.08,0.01,">1 nonsynonymous","N64A G86K",2
"lib1","SARS-CoV-2","GTAACCAATTGCATGA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib1","SARS-CoV-2","GTAACCACAAAAGGAA",6,38.13,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R27G T63F G83A L131T F160I T201M",6
"lib1","SARS-CoV-2","GTAACCACAACAACCG",2,14.33,9.47,-1.29,0.1,2.31,1.02,0,">1 nonsynonymous","T63I D90Y T100V N120Y",4
"lib1","SARS-CoV-2","GTAACCACCAAAAGCC",8,179.91,10.8,0.04,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAACCAGCACACATA",2,55.99,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","S19L I28L K48R I88H V173S",5
"lib1","SARS-CoV-2","GTAACCAGCTCGATTC",3,76.1,10.13,-0.63,0.07,2.17,1.04,0,">1 nonsynonymous","K94S N151F",2
"lib1","SARS-CoV-2","GTAACCAGTAAACGCT",8,53.31,10.84,0.07,0.06,2.88,1.09,0,"1 nonsynonymous","P7E",1
"lib1","SARS-CoV-2","GTAACCAGTATCAATC",10,153.15,10.69,-0.08,0.04,2.97,1.01,0,">1 nonsynonymous","N4T K132Y",2
"lib1","SARS-CoV-2","GTAACCATAGCGCATA",3,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8C I88N A105M Y159W",4
"lib1","SARS-CoV-2","GTAACCCAACACATGA",3,55.35,10.53,-0.23,0.08,2.94,1,0,"1 nonsynonymous","S36F",1
"lib1","SARS-CoV-2","GTAACCCAAGTATAAA",3,7.48,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","A33F S41R G83V R124N S139T",5
"lib1","SARS-CoV-2","GTAACCCCCGCACGAC",2,152.47,9.54,-1.22,0.05,2.77,1.05,0,">1 nonsynonymous","R27T Q84L K87G",3
"lib1","SARS-CoV-2","GTAACCCCTGTTAAGC",2,112.11,10.57,-0.19,0.03,2.94,1.02,0,"1 nonsynonymous","T15V",1
"lib1","SARS-CoV-2","GTAACCCGAAGACAAA",6,66.39,7.85,-2.92,0.26,1.5,1.07,0.02,">1 nonsynonymous","F8E G152Y",2
"lib1","SARS-CoV-2","GTAACCCTAATATACC",1,70.1,10.84,0.08,0.07,2.9,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAACCCTTCGTCAAG",3,17.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T N64S P133L",3
"lib1","SARS-CoV-2","GTAACCCTTGGACGAA",2,1.11,NA,NA,NA,NA,NA,NA,"stop","D59* L125Y",2
"lib1","SARS-CoV-2","GTAACCGACCGTGCTT",10,7.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P82L V103A",2
"lib1","SARS-CoV-2","GTAACCGATGAAAAAG",6,16.02,6.44,-4.32,0.39,1.5,1.11,0.02,">1 nonsynonymous","S41T V103L E141I",3
"lib1","SARS-CoV-2","GTAACCGCGATAGGTG",2,28.58,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K48P T63I P96R",3
"lib1","SARS-CoV-2","GTAACCGCTAATCAAT",7,40.11,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A81S L95M L131R",3
"lib1","SARS-CoV-2","GTAACCGTCCAACATT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","F44* S69G",2
"lib1","SARS-CoV-2","GTAACCGTGGTGTTGG",8,57.36,10.1,-0.66,0.05,2.8,1.07,0,">1 nonsynonymous","C61I D90F",2
"lib1","SARS-CoV-2","GTAACCTAACTATAAA",5,42.97,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y93A T100N Y143L Y159I",4
"lib1","SARS-CoV-2","GTAACCTACCAAGAGG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","E10* L38G T100R N151W",4
"lib1","SARS-CoV-2","GTAACCTGATAAACGA",8,2.21,NA,NA,NA,NA,NA,NA,"stop","R16S T63I V77* T100E F134D Q144T",6
"lib1","SARS-CoV-2","GTAACCTGCAATTAAC",3,52.59,10.89,0.13,0.08,2.91,1.06,0,">1 nonsynonymous","R16E T85S",2
"lib1","SARS-CoV-2","GTAACGAAAGTGAAAT",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P L95H A105N",3
"lib1","SARS-CoV-2","GTAACGAAAGTTGCCT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R S41R D75T Y121N",4
"lib1","SARS-CoV-2","GTAACGAATAATCTAA",3,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y I104K S200I",3
"lib1","SARS-CoV-2","GTAACGACGCCATTTG",3,19.01,8.88,-1.88,0.18,1.5,1.14,0.02,">1 nonsynonymous","Y50T D98S",2
"lib1","SARS-CoV-2","GTAACGAGTAAAAACG",5,44.44,9.22,-1.54,0.2,1.7,1.18,0.02,"1 nonsynonymous","F8K",1
"lib1","SARS-CoV-2","GTAACGAGTGCGTAAG",6,18.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68L Y119H",2
"lib1","SARS-CoV-2","GTAACGATATACAGGG",1,11.73,10.75,-0.02,0.1,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAACGATTGATTAGC",5,15.36,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D34R F62S D90L G101D Y175R",5
"lib1","SARS-CoV-2","GTAACGCAAGCTGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S29L I88* N171L K198A",4
"lib1","SARS-CoV-2","GTAACGCACCGTTTAT",2,44.26,10.45,-0.31,0.15,2.58,1.1,0.01,">1 nonsynonymous","K48R E141R",2
"lib1","SARS-CoV-2","GTAACGCACTCAAGCA",1,27.52,10.32,-0.44,0.05,2.92,1,0,">1 nonsynonymous","N4A A89T S147T",3
"lib1","SARS-CoV-2","GTAACGCCCTTCTTTA",1,15.29,9.43,-1.33,0.24,1.89,1.11,0.02,">1 nonsynonymous","N1E T15F T85C",3
"lib1","SARS-CoV-2","GTAACGCGACACCAAA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","A42R L111*",2
"lib1","SARS-CoV-2","GTAACGCGCGACAGTA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","T46* N107R",2
"lib1","SARS-CoV-2","GTAACGCTAGAAGATA",2,102.41,10.48,-0.28,0.04,2.85,1.07,0,">1 nonsynonymous","N1Y N120S",2
"lib1","SARS-CoV-2","GTAACGCTGGACTAAT",13,4,NA,NA,NA,NA,NA,NA,"stop","P149L T201*",2
"lib1","SARS-CoV-2","GTAACGGGAGAGCCCT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","Y35N W106* F156L Y178S",4
"lib1","SARS-CoV-2","GTAACGGGGCCCATTT",7,11.31,NA,NA,NA,NA,NA,NA,"stop","Q84* Y93K V103A Y121Q",4
"lib1","SARS-CoV-2","GTAACGTTGTCGTTGC",6,20.04,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2S A14L A42S C61Y N92D T100Y",6
"lib1","SARS-CoV-2","GTAACGTTTATATCAA",3,56.64,9.63,-1.14,0.11,2.58,1.06,0,">1 nonsynonymous","S36V Y121S",2
"lib1","SARS-CoV-2","GTAACTAAAATACCAA",8,118.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N30R P96R Y121P F160C Q176V",5
"lib1","SARS-CoV-2","GTAACTAACTTAGAGG",1,53.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9A V32G G86F D97S Y119F R127P",6
"lib1","SARS-CoV-2","GTAACTAAGAGTAACC",5,185.85,8.46,-2.31,0.19,1.74,1.17,0.01,">1 nonsynonymous","G117S F134I",2
"lib1","SARS-CoV-2","GTAACTAATACACAAA",7,118.34,10.69,-0.07,0.04,2.9,1.06,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","GTAACTAATTTAGCTT",2,4.59,NA,NA,NA,NA,NA,NA,"stop","I2G C61S T100Q W106* N120F S139G",6
"lib1","SARS-CoV-2","GTAACTACATGTAGTG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","P169* V182I",2
"lib1","SARS-CoV-2","GTAACTATAAAGATGA",7,48.58,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S36A V52A N58T N64R C158Y Y165K K198G",7
"lib1","SARS-CoV-2","GTAACTATAAATTGAC",7,26.95,8.21,-2.55,0.26,1.5,1.06,0.02,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","GTAACTCATTAAAGGT",4,27.82,7.88,-2.89,0.23,1.68,1.11,0.02,">1 nonsynonymous","S45T F167M",2
"lib1","SARS-CoV-2","GTAACTCCACTTTGTA",2,30.33,9.69,-1.07,0.22,1.93,1.08,0.02,">1 nonsynonymous","A22G Q144I",2
"lib1","SARS-CoV-2","GTAACTCCCATGATTA",5,15.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G101S F160H",2
"lib1","SARS-CoV-2","GTAACTCCCTAATGAC",1,8.95,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14P P82S N107R",3
"lib1","SARS-CoV-2","GTAACTCGAAATAGAA",3,40.03,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9K Y178P",2
"lib1","SARS-CoV-2","GTAACTCGCCCTAGAA",3,42.94,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S69W A89N S113C F156P",4
"lib1","SARS-CoV-2","GTAACTCGCGTCAACT",1,14.14,9.54,-1.22,0.16,2.76,1.22,0.01,">1 nonsynonymous","Y119T T148I",2
"lib1","SARS-CoV-2","GTAACTCTAAATATAA",7,58.95,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T85M G101D P133L V153Q N157Y",5
"lib1","SARS-CoV-2","GTAACTCTGAGAATGC",5,0.76,NA,NA,NA,NA,NA,NA,"stop","I72* T201K",2
"lib1","SARS-CoV-2","GTAACTGAATGCTGCA",1,55.55,10.85,0.09,0.05,2.99,1,0,"1 nonsynonymous","Y39M",1
"lib1","SARS-CoV-2","GTAACTGAGTGGTTTG",4,68.28,6.99,-3.78,0.17,1.5,1.1,0.01,">1 nonsynonymous","K114Q N157I",2
"lib1","SARS-CoV-2","GTAACTGCAGCCCGGC",6,17.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47C R73L S129V P191L",4
"lib1","SARS-CoV-2","GTAACTGGGAGAACTC",4,38.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F47Y I88F",2
"lib1","SARS-CoV-2","GTAACTTAAATTCATT",5,124.53,10.62,-0.14,0.03,2.93,1.02,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","GTAACTTACTCTCCAA",2,20.18,6.55,-4.21,0.29,1.5,1.07,0.01,">1 nonsynonymous","F8P A33C Q79M",3
"lib1","SARS-CoV-2","GTAACTTCCTCAAGAC",2,29.95,10.08,-0.69,0.06,2.94,1.05,0,">1 nonsynonymous","I2L G9F G116D V173D",4
"lib1","SARS-CoV-2","GTAACTTCTTAAATAG",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V Y50N L95R",3
"lib1","SARS-CoV-2","GTAACTTTATCATTTA",3,13.24,8.38,-2.38,0.32,1.75,1.12,0.04,">1 nonsynonymous","Y121G K199C",2
"lib1","SARS-CoV-2","GTAAGAAAAAACTCTA",3,58.75,10.81,0.04,0.08,2.95,1.03,0,">1 nonsynonymous","E141D V173I",2
"lib1","SARS-CoV-2","GTAAGAAAAATACCTA",1,2.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15N",1
"lib1","SARS-CoV-2","GTAAGAAAACCTCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15F G83R C102* C150D G166L",5
"lib1","SARS-CoV-2","GTAAGAAAATCTGATA",3,0.52,NA,NA,NA,NA,NA,NA,"stop","E10G N118*",2
"lib1","SARS-CoV-2","GTAAGAAAATTCCGAC",9,104.66,6,-4.76,1.05,1.5,1.14,0.02,">1 nonsynonymous","A81H N92L N107W S139R G146L Q168K",6
"lib1","SARS-CoV-2","GTAAGAAACCTTACAA",5,102.45,9.3,-1.46,0.16,1.67,1.16,0.01,">1 nonsynonymous","V77M P96D",2
"lib1","SARS-CoV-2","GTAAGAAACGAAGGAC",2,43.38,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S41F P96R V115T P133A G166E",5
"lib1","SARS-CoV-2","GTAAGAAATCACTCCA",1,17.23,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","D68R I88S D112R P149T C158W",5
"lib1","SARS-CoV-2","GTAAGAACAAGATACT",6,120.16,9.65,-1.11,0.05,2.9,1.04,0,"1 nonsynonymous","F126C",1
"lib1","SARS-CoV-2","GTAAGAACTTCTACAA",1,24.26,10.41,-0.36,0.05,2.83,1.15,0,">1 nonsynonymous","K114D N120D",2
"lib1","SARS-CoV-2","GTAAGAAGCCGACACC",3,41.28,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4D F167E",2
"lib1","SARS-CoV-2","GTAAGAAGCTTACCAG",4,9856.11,10.76,-0.01,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGAAGGAACCAAT",5,28.56,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","T85M F99I Y119F",3
"lib1","SARS-CoV-2","GTAAGAAGGCGAAAAA",3,48.85,10.69,-0.07,0.09,2.83,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGAAGTACTTCAA",2,37.05,10.16,-0.6,0.08,2.47,1.04,0,">1 nonsynonymous","Y123T T148I",2
"lib1","SARS-CoV-2","GTAAGAATAAGAAACG",3,44.39,10.67,-0.09,0.1,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGAATACCTGGTG",5,58.05,10.58,-0.19,0.05,2.84,1.09,0,">1 nonsynonymous","L5H D90S",2
"lib1","SARS-CoV-2","GTAAGAATGTAACGAG",3,13.84,10.73,-0.03,0.08,2.88,1.08,0,">1 nonsynonymous","V37W S53R",2
"lib1","SARS-CoV-2","GTAAGAATTGAATTTG",2,18.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A81N K94P",2
"lib1","SARS-CoV-2","GTAAGACACCCTCTAA",1,63.81,10.72,-0.04,0.03,2.95,1,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","GTAAGACACTGAATCT",9,98.33,10.58,-0.18,0.05,2.94,1.02,0,"1 nonsynonymous","L60N",1
"lib1","SARS-CoV-2","GTAAGACATAGGGTTC",6,114.69,10.68,-0.08,0.05,2.93,1.03,0,">1 nonsynonymous","L5F S41M",2
"lib1","SARS-CoV-2","GTAAGACCAAAAGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","GTAAGACCAGATATTT",5,77.93,8.86,-1.91,0.12,2.25,1.13,0.01,">1 nonsynonymous","G9D V11G K87N",3
"lib1","SARS-CoV-2","GTAAGACGAACGAGAA",3,157.56,8.53,-2.23,0.1,2.61,1.07,0,">1 nonsynonymous","K56L A81M Q168D",3
"lib1","SARS-CoV-2","GTAAGACTAATTAAAG",4,93.24,9.73,-1.04,0.06,2.74,1.08,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","GTAAGACTATCCAGAA",4,46.02,10.57,-0.2,0.07,2.87,1.09,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","GTAAGACTTGATTAAG",4,68.39,10.55,-0.22,0.07,2.89,1.06,0,">1 nonsynonymous","K56E T63A D98R",3
"lib1","SARS-CoV-2","GTAAGAGTAAAGTTTC",2,14.97,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","N92R A105M F160N",3
"lib1","SARS-CoV-2","GTAAGAGTTTCAAAAA",2,57.49,9.87,-0.9,0.12,2,1.05,0.01,">1 nonsynonymous","P7F S36K G83A",3
"lib1","SARS-CoV-2","GTAAGATAATACATTT",7,45.46,10.63,-0.13,0.05,2.92,1.04,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","GTAAGATACAAACCTA",5,12.3,10.31,-0.46,0.25,1.59,1.05,0.02,">1 nonsynonymous","T3R S53H F99V",3
"lib1","SARS-CoV-2","GTAAGATATATTAGAA",2,20.18,10.9,0.14,0.08,2.83,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGATATGCACTTA",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I V103L R136I S164A",4
"lib1","SARS-CoV-2","GTAAGATGAACGCAAA",4,16.18,9.4,-1.36,0.26,1.51,1.15,0.04,"1 nonsynonymous","D137T",1
"lib1","SARS-CoV-2","GTAAGATGATAGAAAG",3,21.06,9.61,-1.15,0.14,2.29,1.12,0.01,">1 nonsynonymous","Y39N N92S",2
"lib1","SARS-CoV-2","GTAAGATTAGTCTTAA",7,161.52,10.27,-0.49,0.07,2.5,1.01,0,">1 nonsynonymous","W106S Q163A",2
"lib1","SARS-CoV-2","GTAAGATTCAGTTAAA",3,0.13,NA,NA,NA,NA,NA,NA,"stop","A42* D59Y P82W D97Q N157W",5
"lib1","SARS-CoV-2","GTAAGCAAATTCCTGT",1,22.75,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N58S D112Q",2
"lib1","SARS-CoV-2","GTAAGCAAGAAGATCA",6,1649.98,9,-1.76,0.09,1.99,1.09,0,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","GTAAGCAAGACGTGTT",3,78.79,9.68,-1.09,0.12,1.88,1.08,0.01,">1 nonsynonymous","R127M K199M",2
"lib1","SARS-CoV-2","GTAAGCACACATCAAG",2,1.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L125T",1
"lib1","SARS-CoV-2","GTAAGCAGACAAATCC",6,59.92,8.05,-2.71,0.25,1.5,1.15,0.02,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","GTAAGCAGTGTATGTT",9,136.05,6.08,-4.69,0.95,1.5,1.24,0.02,">1 nonsynonymous","L5A T46Y L60F P82E",4
"lib1","SARS-CoV-2","GTAAGCATAACTACAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72G P177R T201V",3
"lib1","SARS-CoV-2","GTAAGCATCAACTATT",4,81.84,10.51,-0.25,0.04,2.92,1.02,0,">1 nonsynonymous","A14N S147Y",2
"lib1","SARS-CoV-2","GTAAGCCACCACCCAA",1,41.2,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y39I S45D K56M N107R N120L P149N F156L P169A",8
"lib1","SARS-CoV-2","GTAAGCCATAAACCGT",5,18.65,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V52I G86L W106R",3
"lib1","SARS-CoV-2","GTAAGCCCTCCCAAAC",2,9.79,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","C61G F99H N107L",3
"lib1","SARS-CoV-2","GTAAGCCGAAGTAACA",4,44.65,9.94,-0.83,0.11,2.11,1.06,0,">1 nonsynonymous","L5A L60A D75R A105T K128N",5
"lib1","SARS-CoV-2","GTAAGCCGTGCAATTT",5,8.69,6.75,-4.01,0.33,1.5,1,0.02,">1 nonsynonymous","F8L A33E A105H G116W T140H N151E V194I",7
"lib1","SARS-CoV-2","GTAAGCCTTAGATACT",3,26.55,10.8,0.03,0.1,2.84,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAAGCGATGGATGCT",4,121.16,6,-4.76,1.47,1.5,1.23,0.02,">1 nonsynonymous","I2M R16Q T63S P149L P177C",5
"lib1","SARS-CoV-2","GTAAGCGGGTGAATAA",4,1.08,NA,NA,NA,NA,NA,NA,"stop","V37* Y50S C61L",3
"lib1","SARS-CoV-2","GTAAGCGTTTCCGCAT",3,57.24,10.78,0.02,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGCTAAACACCAT",4,1.12,NA,NA,NA,NA,NA,NA,"stop","E10I F17* T55F R136V",4
"lib1","SARS-CoV-2","GTAAGCTAAATCAAGT",7,145,10.62,-0.15,0.05,2.92,1.02,0,">1 nonsynonymous","L5V N58M",2
"lib1","SARS-CoV-2","GTAAGCTAAGTTGAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","F8M N40K G83R G101* N120K E141L",6
"lib1","SARS-CoV-2","GTAAGCTACTAAATAG",2,10.89,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","Y91G S108K Y119I",3
"lib1","SARS-CoV-2","GTAAGCTCAAACAGAG",1,30.81,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","K26R L60E V65E L95V N107R",5
"lib1","SARS-CoV-2","GTAAGCTCCTCGTAAA",5,43.54,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A18T R27S V37N D59W V182S",5
"lib1","SARS-CoV-2","GTAAGCTGACGTCTAC",3,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G G101N V173F",3
"lib1","SARS-CoV-2","GTAAGCTTTGTCGCAA",3,23.08,10.82,0.05,0.07,2.95,1.03,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","GTAAGGAAGTAGTTAT",5,38.93,10.82,0.06,0.08,2.87,1.06,0,">1 nonsynonymous","G9N L122T P149M",3
"lib1","SARS-CoV-2","GTAAGGATGAAGGAGG",5,43.76,10.77,0.01,0.06,2.94,1.03,0,">1 nonsynonymous","K48A N64S",2
"lib1","SARS-CoV-2","GTAAGGCAATTAAATC",2,0.21,NA,NA,NA,NA,NA,NA,"stop","T46G Q84M R127W P197L T201*",5
"lib1","SARS-CoV-2","GTAAGGCACTAGTGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35W S41E K87T N109E Q163*",5
"lib1","SARS-CoV-2","GTAAGGCATAATCGAA",4,61.61,10.76,-0.01,0.08,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAAGGCCAGAAGTTT",9,92.21,6.67,-4.1,0.18,1.5,1.08,0,">1 nonsynonymous","S29R D98S Y143R V153T",4
"lib1","SARS-CoV-2","GTAAGGCCCGCTAACG",4,13.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12N D90L D97I K128C",4
"lib1","SARS-CoV-2","GTAAGGCCCTCTAGAT",1,0.27,NA,NA,NA,NA,NA,NA,"stop","G74* N118L",2
"lib1","SARS-CoV-2","GTAAGGCTAACTTTAT",6,74.33,8.95,-1.81,0.14,1.88,1.12,0.01,">1 nonsynonymous","A33T Q176K",2
"lib1","SARS-CoV-2","GTAAGGCTTCGAATAG",6,95.4,9.2,-1.57,0.18,1.5,1.09,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","GTAAGGCTTTATCGGT",3,50.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I88D E135N G166E",3
"lib1","SARS-CoV-2","GTAAGGGAGAAATTTG",1,57.95,9.96,-0.8,0.12,2.27,1.09,0.01,">1 nonsynonymous","P133L T201E",2
"lib1","SARS-CoV-2","GTAAGGGCAATCCACA",3,5.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D G86C I104Y G146F",4
"lib1","SARS-CoV-2","GTAAGGGGATAATGTC",4,44.33,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T63P G86K",2
"lib1","SARS-CoV-2","GTAAGGGGCACTACGT",12,156.28,10.54,-0.22,0.05,2.91,1.04,0,">1 nonsynonymous","S41L K128S",2
"lib1","SARS-CoV-2","GTAAGGGGGCCCGAAG",5,21.08,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4L F99E L162W G196C",4
"lib1","SARS-CoV-2","GTAAGGGTTAGGACCA",2,30.13,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","L38I N120I G152I V181A",4
"lib1","SARS-CoV-2","GTAAGGTCTAAGAGTG",3,43.03,10.7,-0.06,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGGTGATCTAAAA",15,128.48,10.69,-0.08,0.05,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGTAAAAGAAATG",1,4.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGTAAATGAATAT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K N107G K128S P149K",4
"lib1","SARS-CoV-2","GTAAGTAACAGCACCG",2,1.15,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib1","SARS-CoV-2","GTAAGTAATATGCGAG",7,102.24,6,-4.76,1.35,1.5,1.19,0.02,">1 nonsynonymous","Y35N D68T A105T",3
"lib1","SARS-CoV-2","GTAAGTAATGTTCATC",3,105.78,10.67,-0.09,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGTACAATTCTTC",2,63.59,10.69,-0.07,0.08,2.93,1.02,0,"1 nonsynonymous","T63H",1
"lib1","SARS-CoV-2","GTAAGTACACATCCAA",3,27.4,10.06,-0.71,0.15,2.16,1.04,0.01,">1 nonsynonymous","D34L D98T E154P",3
"lib1","SARS-CoV-2","GTAAGTACTAACCATG",6,63.48,10.83,0.07,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGTATTTTTTGAA",6,51.08,9.99,-0.78,0.14,2.36,1.03,0.01,">1 nonsynonymous","G9V G83D",2
"lib1","SARS-CoV-2","GTAAGTCAACAGTCCA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","P96C W106L G155I N171* Q176V",5
"lib1","SARS-CoV-2","GTAAGTCAACCCCTCA",1,26.07,9.75,-1.01,0.2,1.6,1.11,0.02,">1 nonsynonymous","S69W Q144R",2
"lib1","SARS-CoV-2","GTAAGTCCCCTAATAT",1,1.02,NA,NA,NA,NA,NA,NA,"stop","A42R E76* E135M V153*",4
"lib1","SARS-CoV-2","GTAAGTCGCCATATGC",6,367.78,10.62,-0.14,0.03,2.92,1.05,0,"1 nonsynonymous","G174S",1
"lib1","SARS-CoV-2","GTAAGTCGTAGAAGCC",2,21.53,8.42,-2.34,0.35,1.5,1.01,0.05,">1 nonsynonymous","A42W S45G K87R D98V Y121L V153P",6
"lib1","SARS-CoV-2","GTAAGTCTGAAGACTT",2,40.64,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R78M G83L I104Q L131T",4
"lib1","SARS-CoV-2","GTAAGTCTTGCCATAA",2,54.38,8.88,-1.88,0.18,1.68,1.14,0.02,">1 nonsynonymous","P82L N130S",2
"lib1","SARS-CoV-2","GTAAGTGAGATACAAG",1,44.67,6,-4.76,1.34,1.5,1.18,0.02,">1 nonsynonymous","C6S A105S F167T",3
"lib1","SARS-CoV-2","GTAAGTGATACAGAAC",5,0.21,NA,NA,NA,NA,NA,NA,"stop","S29P V115C P133*",3
"lib1","SARS-CoV-2","GTAAGTGATTGCATAT",3,58.53,9.83,-0.94,0.14,2.32,1.1,0.01,">1 nonsynonymous","G9V T100S G152H",3
"lib1","SARS-CoV-2","GTAAGTGATTTGAATG",7,49.75,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","F12M W23K I142D S200D",4
"lib1","SARS-CoV-2","GTAAGTGCATTAGTCC",10,1315.76,10.76,0,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAAGTGCGCAAACAA",4,22.09,6,-4.76,2,1.5,1.4,0.08,">1 nonsynonymous","N4G V11D V20M R27S Y93N Y121T T170V G196K",8
"lib1","SARS-CoV-2","GTAAGTGTTAGCCAGG",8,105.66,10.43,-0.34,0.04,2.8,1.03,0,">1 nonsynonymous","A81C T148N Y175W",3
"lib1","SARS-CoV-2","GTAAGTTAAAAAAACT",1,6.84,6,-4.76,2,2.09,1.23,0.03,">1 nonsynonymous","C6F N13F G117K T140N",4
"lib1","SARS-CoV-2","GTAAGTTAATCCTACT",3,16.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D112K Y143S",2
"lib1","SARS-CoV-2","GTAAGTTAATTTTCCA",1,0.85,NA,NA,NA,NA,NA,NA,"stop","S36F A81S Y143*",3
"lib1","SARS-CoV-2","GTAAGTTATTACAATC",1,13.52,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y35M S45Q T63I G101Y K128T S139Y C150Y",7
"lib1","SARS-CoV-2","GTAAGTTGCAAGTAAG",2,78.42,10.11,-0.65,0.13,2.71,1,0.01,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","GTAATAAAAAATCTCG",1,20.56,10.75,-0.01,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATAAAATTGGCAG",3,2,NA,NA,NA,NA,NA,NA,"stop","A14K Q144S F156P Y178*",4
"lib1","SARS-CoV-2","GTAATAAACACAGTAG",3,0.38,NA,NA,NA,NA,NA,NA,"stop","N107R L111S Y143* H189P",4
"lib1","SARS-CoV-2","GTAATAAACCATATTA",9,78.63,9.02,-1.74,0.25,1.5,1,0.03,">1 nonsynonymous","G9M Y66G",2
"lib1","SARS-CoV-2","GTAATAAACGCATGCC",6,71.21,8.58,-2.18,0.18,2.09,1.05,0.01,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","GTAATAAAGATGACCA",2,6.62,6,-4.76,2,3,1.09,0.05,">1 nonsynonymous","A33S G51K S113K R127W",4
"lib1","SARS-CoV-2","GTAATAAATAGGTATA",3,29.67,7.01,-3.75,0.11,1.95,1.11,0,"1 nonsynonymous","C158M",1
"lib1","SARS-CoV-2","GTAATAAATATACTCG",6,148.61,9.27,-1.5,0.13,1.96,1.15,0.01,">1 nonsynonymous","C61G K128Q G155V",3
"lib1","SARS-CoV-2","GTAATAAATATTGGCA",9,94.53,6.43,-4.34,0.58,1.5,1.27,0.02,">1 nonsynonymous","F12N L60C Q84P I142L F156L",5
"lib1","SARS-CoV-2","GTAATAAATGAACGTG",1,41.67,7.45,-3.32,0.22,1.5,1.08,0.01,">1 nonsynonymous","A14H C61Q I138G G155M",4
"lib1","SARS-CoV-2","GTAATAAATGGGCGGT",3,16.69,6.79,-3.97,0.4,1.5,1.13,0.02,">1 nonsynonymous","S19N Y93A D98Y",3
"lib1","SARS-CoV-2","GTAATAACATCGAATG",4,151.8,10.76,0,0.06,2.93,1.03,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","GTAATAACCACGAAAC",5,114.21,8.55,-2.22,0.18,2.3,1.08,0.01,">1 nonsynonymous","N157L F160I",2
"lib1","SARS-CoV-2","GTAATAACCGGACCAT",3,115.17,10.79,0.03,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATAACCTCCCTAG",4,0,NA,NA,NA,NA,NA,NA,"stop","L5T E135* T170A",3
"lib1","SARS-CoV-2","GTAATAACGGAATTGC",5,177.66,10.76,-0.01,0.07,2.86,1.06,0,">1 nonsynonymous","T55S N64T",2
"lib1","SARS-CoV-2","GTAATAACTCACAGAA",5,0.64,NA,NA,NA,NA,NA,NA,"stop","A18* G146E",2
"lib1","SARS-CoV-2","GTAATAACTGACAGAT",1,34.11,10.86,0.1,0.07,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAATAAGAAAAAACC",4,72.55,8.26,-2.5,0.18,2.46,1.18,0.01,">1 nonsynonymous","S41L T63S Y159Q",3
"lib1","SARS-CoV-2","GTAATAAGAAAGACCA",2,12.16,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","V77T K94M",2
"lib1","SARS-CoV-2","GTAATAAGAGGCCGGC",9,42.34,6.12,-4.64,1.06,1.5,1.25,0.02,">1 nonsynonymous","I28F I88E N130E N171K",4
"lib1","SARS-CoV-2","GTAATAAGCGACCAAA",8,1.47,NA,NA,NA,NA,NA,NA,"stop","P54G Q163G G166S T170L K198*",5
"lib1","SARS-CoV-2","GTAATAAGGTGCATCT",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H I88L V115L T148A",4
"lib1","SARS-CoV-2","GTAATAAGTATTAAGA",5,26.94,10.68,-0.09,0.07,2.84,1.13,0,"1 nonsynonymous","I104Y",1
"lib1","SARS-CoV-2","GTAATAAGTATTAATG",2,56.13,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","F8T V37M C150S",3
"lib1","SARS-CoV-2","GTAATAATAAAAATTC",2,8.39,7.65,-3.11,0.38,1.5,1.05,0.05,">1 nonsynonymous","C31Y W106C",2
"lib1","SARS-CoV-2","GTAATAATAACTTGGA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73S P149H A190I",3
"lib1","SARS-CoV-2","GTAATAATACCATAAA",5,26.33,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I2L V103R F156M",3
"lib1","SARS-CoV-2","GTAATAATACGTCCTG",4,33.7,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86L Y93S",2
"lib1","SARS-CoV-2","GTAATAATCAACGTAT",2,10.8,8.04,-2.72,0.24,2.51,1.08,0.02,">1 nonsynonymous","C6G Q84L F156L",3
"lib1","SARS-CoV-2","GTAATAATCACGGCTA",1,85.04,6.77,-4,0.26,1.5,1.12,0.01,">1 nonsynonymous","T46W V115K C158R",3
"lib1","SARS-CoV-2","GTAATAATGTGTGAGG",2,98.09,8.15,-2.61,0.19,2.23,1.13,0.01,">1 nonsynonymous","N157D Q176S",2
"lib1","SARS-CoV-2","GTAATACACTTAGTTA",3,40.82,6.7,-4.06,0.34,1.5,1.13,0.02,">1 nonsynonymous","N40R Y93I Y119L",3
"lib1","SARS-CoV-2","GTAATACAGGCAAACT",4,41.88,10.66,-0.1,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATACATACGCTGC",5,0.32,NA,NA,NA,NA,NA,NA,"stop","C6L N40* G146L",3
"lib1","SARS-CoV-2","GTAATACATGATCTAG",6,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88T T170S",2
"lib1","SARS-CoV-2","GTAATACATGCAATTG",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T D97N",2
"lib1","SARS-CoV-2","GTAATACCAAATAGAT",2,28.24,10.34,-0.43,0.07,2.89,1.06,0,">1 nonsynonymous","C61S E141Y",2
"lib1","SARS-CoV-2","GTAATACCCATAAACT",2,20.54,6,-4.76,2,1.5,1.3,0.04,"1 nonsynonymous","V181G",1
"lib1","SARS-CoV-2","GTAATACCGCTTCCAA",2,61.66,9.11,-1.66,0.11,1.66,1.12,0.01,">1 nonsynonymous","R127T I138V",2
"lib1","SARS-CoV-2","GTAATACCTCCCCTTA",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G L95E E141M G155I",4
"lib1","SARS-CoV-2","GTAATACCTGAGTAAA",3,1.33,NA,NA,NA,NA,NA,NA,"stop","R136D G174*",2
"lib1","SARS-CoV-2","GTAATACGATATATCC",1,6.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G V32R D90I P169R",4
"lib1","SARS-CoV-2","GTAATACGCGCAACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V71* K87D G101* P161R",4
"lib1","SARS-CoV-2","GTAATACGTTTAGCCA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","Y35H E76*",2
"lib1","SARS-CoV-2","GTAATAGAGTACACCA",1,59.28,10.4,-0.36,0.06,2.87,1,0,">1 nonsynonymous","N1F N120Y",2
"lib1","SARS-CoV-2","GTAATAGGAGATCACT",6,2.01,NA,NA,NA,NA,NA,NA,"stop","Y39D N64* G86P T201*",4
"lib1","SARS-CoV-2","GTAATAGTATCGCTCA",3,7.74,8.61,-2.16,0.44,1.5,1,0.06,">1 nonsynonymous","E10M F47S K56G",3
"lib1","SARS-CoV-2","GTAATAGTTTTTCACC",4,43.46,10.85,0.09,0.07,2.92,1.04,0,">1 nonsynonymous","L122R I138T",2
"lib1","SARS-CoV-2","GTAATATAACACTGTA",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43N A89S A145S",3
"lib1","SARS-CoV-2","GTAATATATAACAGCG",4,2.36,NA,NA,NA,NA,NA,NA,"stop","K114L S200*",2
"lib1","SARS-CoV-2","GTAATATATTACAACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTAATATCACCCTTGT",1,8.27,6.43,-4.34,0.63,1.98,1.32,0.02,">1 nonsynonymous","P149S C150Y",2
"lib1","SARS-CoV-2","GTAATATGTTTTTAAG",4,77.65,10.72,-0.05,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATATTAAACTATA",15,99.2,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y35H L57M L95F N157S Y165R",5
"lib1","SARS-CoV-2","GTAATATTCTAACTTA",5,53.91,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","Y123P",1
"lib1","SARS-CoV-2","GTAATCAAAACTATGC",6,1.98,NA,NA,NA,NA,NA,NA,"stop","T3G V37* V103R",3
"lib1","SARS-CoV-2","GTAATCAAAACTGAAT",4,57.34,9.41,-1.35,0.18,1.99,1.15,0.01,">1 nonsynonymous","N107S I142T",2
"lib1","SARS-CoV-2","GTAATCAAACGCGGAC",6,69.6,7.45,-3.32,0.19,1.71,1.11,0.01,">1 nonsynonymous","I2L V37H N64Y T140N C158S",5
"lib1","SARS-CoV-2","GTAATCAACACGGCCA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S F99I N107S L122R K128R",5
"lib1","SARS-CoV-2","GTAATCAATGATTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T85L N118T P149*",3
"lib1","SARS-CoV-2","GTAATCAATGTTTCAC",7,28.28,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","I88R C102W D112I Y119N T140G",5
"lib1","SARS-CoV-2","GTAATCACAAAATTAT",5,52.33,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6L F12P N24F N107P",4
"lib1","SARS-CoV-2","GTAATCACGAACGATG",1,17.54,9.95,-0.81,0.3,2.34,1,0.04,">1 nonsynonymous","V37L N64E F70D",3
"lib1","SARS-CoV-2","GTAATCAGAAGCAATG",3,7.95,9.14,-1.62,0.38,1.5,1,0.05,">1 nonsynonymous","S41T C49H G166N",3
"lib1","SARS-CoV-2","GTAATCAGCGACAAAT",2,12.31,8.59,-2.18,0.2,2.83,1.05,0,">1 nonsynonymous","N64P G166K S184F",3
"lib1","SARS-CoV-2","GTAATCAGTAATGATT",1,14.86,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R127V P177S",2
"lib1","SARS-CoV-2","GTAATCATGTTCTTTA",2,30.85,8.26,-2.51,0.4,1.5,1,0.07,">1 nonsynonymous","A89K P149K",2
"lib1","SARS-CoV-2","GTAATCCACACCGCCT",6,47.64,10.65,-0.12,0.06,2.87,1.06,0,">1 nonsynonymous","R16M T100M S164P",3
"lib1","SARS-CoV-2","GTAATCCACCAACAGA",9,28.57,9.76,-1.01,0.37,1.5,1,0.06,">1 nonsynonymous","N13K Y66N Q144R A190R",4
"lib1","SARS-CoV-2","GTAATCCAGACGGGCA",1,37.98,10.34,-0.42,0.08,2.86,1.09,0,">1 nonsynonymous","G83F G116V",2
"lib1","SARS-CoV-2","GTAATCCCAGCACATG",9,19.14,9.73,-1.03,0.3,1.5,1.17,0.05,"1 nonsynonymous","T100E",1
"lib1","SARS-CoV-2","GTAATCCCGGGCACGC",3,38.05,8.37,-2.4,0.19,1.5,1.06,0.01,">1 nonsynonymous","I2M S139R A145N K198W",4
"lib1","SARS-CoV-2","GTAATCCCTGAGGACG",4,63.46,10.72,-0.04,0.07,2.93,1.03,0,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","GTAATCCTACCTGACC",3,15.9,8.98,-1.78,0.3,1.5,1,0.06,">1 nonsynonymous","L131Y N151L",2
"lib1","SARS-CoV-2","GTAATCCTAGTAGAGC",3,33.95,10.58,-0.19,0.07,2.92,1.07,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","GTAATCCTATGTACTT",5,72.62,6.66,-4.11,0.46,1.5,1.19,0.03,">1 nonsynonymous","G9L A14S F62M S69G",4
"lib1","SARS-CoV-2","GTAATCCTTGTTAAAT",1,21.49,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","A22Q A33C Q84Y N151D Q176T",5
"lib1","SARS-CoV-2","GTAATCGACCACTAGC",2,71.29,10.8,0.03,0.08,2.92,1.07,0,">1 nonsynonymous","L60K F134Y",2
"lib1","SARS-CoV-2","GTAATCGATACCTGCA",2,167.09,9.72,-1.04,0.06,2.71,1.07,0,">1 nonsynonymous","W23Y C61R Y121L",3
"lib1","SARS-CoV-2","GTAATCGATTACGACT",1,33.21,10.81,0.05,0.07,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATCGGAGGTTTAT",4,1.4,NA,NA,NA,NA,NA,NA,"stop","F12* V32Q K87S",3
"lib1","SARS-CoV-2","GTAATCGTCCACATGC",2,28.97,10.39,-0.38,0.05,2.86,1.05,0,">1 nonsynonymous","N13H Y39T F62L",3
"lib1","SARS-CoV-2","GTAATCTAAATAATAA",1,50.75,10.49,-0.27,0.06,2.87,1,0,">1 nonsynonymous","S41I V115P S139Q T201K",4
"lib1","SARS-CoV-2","GTAATCTAATTAATAT",3,351.36,9.29,-1.47,0.08,2.54,1.12,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","GTAATCTACCCACATC",2,7.67,6,-4.76,2,3,1.34,0.03,">1 nonsynonymous","A89L L95R Q144R C158R T201R",5
"lib1","SARS-CoV-2","GTAATCTATGAAAATG",2,58.57,10.85,0.09,0.1,2.83,1.07,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","GTAATCTCCTTTTATG",5,50.38,10.84,0.08,0.1,2.92,1.04,0,">1 nonsynonymous","V37E I138M",2
"lib1","SARS-CoV-2","GTAATCTTTCCCCAAT",7,19.2,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","P96L I104T K132R",3
"lib1","SARS-CoV-2","GTAATCTTTTGTTTTT",7,64.27,8.6,-2.17,0.16,1.68,1.16,0.01,">1 nonsynonymous","G86E F160Y",2
"lib1","SARS-CoV-2","GTAATGAAAGTACCCG",1,35.41,10.47,-0.3,0.11,2.69,1.04,0,">1 nonsynonymous","A42D S139L",2
"lib1","SARS-CoV-2","GTAATGAACAATCTCT",4,69.24,10.64,-0.13,0.05,2.93,1.01,0,">1 nonsynonymous","K87H T201M",2
"lib1","SARS-CoV-2","GTAATGAATCTACTCC",3,48.09,8.95,-1.82,0.09,2.73,1.17,0,">1 nonsynonymous","N110S Y119A L183M",3
"lib1","SARS-CoV-2","GTAATGAATTTATAGC",4,59.47,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","F44P G86N Y119L Q144V S164K",5
"lib1","SARS-CoV-2","GTAATGACCATGCACC",1,9.65,9.35,-1.41,0.19,2.72,1.08,0.01,"1 nonsynonymous","G166I",1
"lib1","SARS-CoV-2","GTAATGAGATCTGGTT",8,59.84,10.8,0.04,0.06,2.89,1.05,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","GTAATGAGTGTCAAAA",3,33.23,10.45,-0.32,0.1,2.82,1.06,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","GTAATGATACGTGGTA",13,140.98,10.59,-0.17,0.04,2.94,1.03,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","GTAATGATCCGATCGC",3,49.99,10.7,-0.06,0.05,2.95,1,0,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","GTAATGATGCAAATAT",4,0.4,NA,NA,NA,NA,NA,NA,"stop","T55* D112*",2
"lib1","SARS-CoV-2","GTAATGATGCTCTGAC",12,105.69,10.82,0.05,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATGATTACGAAAC",6,21.95,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D98F Y121A I142K P161A",4
"lib1","SARS-CoV-2","GTAATGATTGTCCAGT",7,8.56,NA,NA,NA,NA,NA,NA,"stop","D34H S43T G51K T85L F134* P177D",6
"lib1","SARS-CoV-2","GTAATGATTTAATACT",3,36.79,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","N30F Y39M Y50L",3
"lib1","SARS-CoV-2","GTAATGCACGAATAAG",3,0.42,NA,NA,NA,NA,NA,NA,"stop","T3R A14N C31* K56G K87T Y175H",6
"lib1","SARS-CoV-2","GTAATGCACTCGCCCT",5,79.53,6.35,-4.41,0.82,1.5,1.15,0.05,">1 nonsynonymous","R16N G101S Q144P C150Y",4
"lib1","SARS-CoV-2","GTAATGCAGTCGGGAC",11,16.73,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","V65T P82S Y91P F167L",4
"lib1","SARS-CoV-2","GTAATGCCAACCGCAA",3,10.81,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N4P T55S N92L L162M",4
"lib1","SARS-CoV-2","GTAATGCCCAGTAGTA",6,8.98,10.48,-0.28,0.2,2.48,1,0.02,">1 nonsynonymous","T85R D90G",2
"lib1","SARS-CoV-2","GTAATGCGAGAACTAA",3,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F A81I V103S N157P",4
"lib1","SARS-CoV-2","GTAATGCTAAAACTTT",5,11.04,NA,NA,NA,NA,NA,NA,"stop","L95A A105P I138* P149L C158L",5
"lib1","SARS-CoV-2","GTAATGCTACCCATTA",1,26.44,6.32,-4.45,0.73,1.5,1.2,0.03,">1 nonsynonymous","D59Q A67N",2
"lib1","SARS-CoV-2","GTAATGGACTTAACAG",4,7.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I I88K R127Q Q144V",4
"lib1","SARS-CoV-2","GTAATGGATACGTATA",2,6.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2K G86H V173A",3
"lib1","SARS-CoV-2","GTAATGTAATAAGCTA",2,27.99,10.23,-0.54,0.06,2.8,1,0,">1 nonsynonymous","Y35G N151Y K199I",3
"lib1","SARS-CoV-2","GTAATGTATTCATTAT",9,236.62,8.9,-1.87,0.06,2.76,1.1,0,">1 nonsynonymous","T46S T63V S108A Y119P",4
"lib1","SARS-CoV-2","GTAATGTCATTAGCGA",3,9.61,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","C31K D68V I88W W106L P149H E154D G196W",7
"lib1","SARS-CoV-2","GTAATGTCCCATATAC",2,16.18,9.5,-1.26,0.26,1.5,1.08,0.03,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","GTAATGTCGAGCACTT",2,40.15,9.4,-1.37,0.1,2.76,1.07,0,"1 nonsynonymous","Y121P",1
"lib1","SARS-CoV-2","GTAATGTGACTTATCA",9,122.17,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Q84V F134I P161L",3
"lib1","SARS-CoV-2","GTAATGTGAGGGGCGC",1,12.04,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44S Y91T",2
"lib1","SARS-CoV-2","GTAATGTTACTTTCAT",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S A42G P54F D112A",4
"lib1","SARS-CoV-2","GTAATGTTGATTACAC",4,31.36,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","W23V C61N Y119C",3
"lib1","SARS-CoV-2","GTAATTAAATTCAACT",1,10.51,10.64,-0.12,0.06,2.92,1.05,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","GTAATTAAGCCCCCTG",5,63.21,10.7,-0.06,0.06,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAATTAAGTATGTAT",2,13.04,10.46,-0.31,0.05,2.88,1.11,0,">1 nonsynonymous","N64Q G155R",2
"lib1","SARS-CoV-2","GTAATTAATATTCGAC",4,43.74,9.44,-1.32,0.09,2.79,1.05,0,">1 nonsynonymous","R27S G51S F126H",3
"lib1","SARS-CoV-2","GTAATTACAAGACAAT",8,73.02,10.78,0.02,0.07,2.85,1.1,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","GTAATTACAAGCCCCG",3,9.57,NA,NA,NA,NA,NA,NA,"stop","G51* G146T",2
"lib1","SARS-CoV-2","GTAATTACCAATCCCA",2,20.07,10.8,0.04,0.08,2.92,1,0,"1 nonsynonymous","T148H",1
"lib1","SARS-CoV-2","GTAATTACCTCTTCCG",3,1.32,NA,NA,NA,NA,NA,NA,"stop","F44P L95*",2
"lib1","SARS-CoV-2","GTAATTACTCACTCGG",6,32.9,9.67,-1.1,0.1,2.28,1.02,0.01,"1 nonsynonymous","A89M",1
"lib1","SARS-CoV-2","GTAATTAGAACTCTGT",3,1.89,NA,NA,NA,NA,NA,NA,"stop","A33N D68I S139L C150*",4
"lib1","SARS-CoV-2","GTAATTAGGAATAGAG",1,49.41,6.5,-4.26,0.42,1.61,1.23,0.01,">1 nonsynonymous","F99Y Y175D",2
"lib1","SARS-CoV-2","GTAATTAGGAGTATTC",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D V20R D112T R179Y",4
"lib1","SARS-CoV-2","GTAATTATAAATTTTG",2,78.71,10.69,-0.07,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATTATAACAGAAC",3,50.53,9.24,-1.53,0.07,2.85,1.1,0,">1 nonsynonymous","Q163M G166D T201K",3
"lib1","SARS-CoV-2","GTAATTATAACTAACT",1,58.09,10.26,-0.51,0.05,2.93,1.02,0,">1 nonsynonymous","R78L S139D",2
"lib1","SARS-CoV-2","GTAATTATACTCAACA",4,152.74,10.47,-0.3,0.05,2.88,1.05,0,">1 nonsynonymous","D59L N120S S129K",3
"lib1","SARS-CoV-2","GTAATTATAGAAGATA",7,56.14,10.82,0.06,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAATTATCACGTCCA",2,1,NA,NA,NA,NA,NA,NA,"stop","G51V F99C T148L F167*",4
"lib1","SARS-CoV-2","GTAATTATTCGTAGTA",1,15.89,10.74,-0.03,0.04,2.92,1.07,0,">1 nonsynonymous","F62S E141D",2
"lib1","SARS-CoV-2","GTAATTATTGGTTATG",6,104.35,10.79,0.02,0.06,2.93,1.06,0,">1 nonsynonymous","T140E T201S",2
"lib1","SARS-CoV-2","GTAATTATTTTTATAT",3,49.3,8.4,-2.37,0.14,2.63,1.07,0.01,">1 nonsynonymous","I2G T100R F134Y Y175V T201E",5
"lib1","SARS-CoV-2","GTAATTCACAGAAAGA",2,53.78,9.99,-0.77,0.06,2.98,1,0,">1 nonsynonymous","C61E E154C",2
"lib1","SARS-CoV-2","GTAATTCACTAATCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* Y35W A81Y Y93V E141* Y175G",6
"lib1","SARS-CoV-2","GTAATTCAGATTCTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib1","SARS-CoV-2","GTAATTCCAAAGCATA",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S N64D E76T A105G S139R",5
"lib1","SARS-CoV-2","GTAATTCCACGACGGT",2,41.4,9.36,-1.41,0.06,2.86,1.03,0,">1 nonsynonymous","L60R Y119G",2
"lib1","SARS-CoV-2","GTAATTCCCAACTGGG",2,106.02,10.23,-0.53,0.06,2.75,1.03,0,"1 nonsynonymous","G51D",1
"lib1","SARS-CoV-2","GTAATTCCCTCCAAAA",7,1.06,NA,NA,NA,NA,NA,NA,"stop","T3* G116S N151V F156I",4
"lib1","SARS-CoV-2","GTAATTCGACAAGGGG",8,126.35,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N24D Y93N Y175L",3
"lib1","SARS-CoV-2","GTAATTCTACCATGAC",3,18.83,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","P161K",1
"lib1","SARS-CoV-2","GTAATTCTAGTCTTCC",2,46.38,10.7,-0.07,0.05,2.91,1.05,0,">1 nonsynonymous","V11L V173Q",2
"lib1","SARS-CoV-2","GTAATTCTCAGTATTA",10,20.95,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T15Q R25D D34S K48Y R124P",5
"lib1","SARS-CoV-2","GTAATTGAAGAAGGCT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","V11F K56* I104C",3
"lib1","SARS-CoV-2","GTAATTGAGGCATCTG",4,27.9,6,-4.76,1.51,1.5,1.11,0.02,">1 nonsynonymous","S147Y P161L",2
"lib1","SARS-CoV-2","GTAATTGCCATCCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K F44L T55V G117P",4
"lib1","SARS-CoV-2","GTAATTGCGACTACGC",8,169.52,6.21,-4.55,0.52,1.5,1.2,0.01,">1 nonsynonymous","Y39F Y91T G152V T201M",4
"lib1","SARS-CoV-2","GTAATTGGTACTCGAA",4,36.42,10.01,-0.75,0.15,1.87,1.04,0.01,">1 nonsynonymous","T85M I138F G152R",3
"lib1","SARS-CoV-2","GTAATTGTGCGAAAAT",5,62.08,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K87D Y93N V103W S139W P149L",5
"lib1","SARS-CoV-2","GTAATTTAAACGGATA",2,18.6,9.85,-0.92,0.07,2.85,1.04,0,">1 nonsynonymous","S41M G83L D98E P169R P197S",5
"lib1","SARS-CoV-2","GTAATTTTAAATTTAC",8,95.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37A T85L D90M V103I Y121P R127F",6
"lib1","SARS-CoV-2","GTAATTTTATGATCCT",6,71.93,10.46,-0.31,0.05,2.87,1.07,0,">1 nonsynonymous","F156A T201G",2
"lib1","SARS-CoV-2","GTAATTTTATGGGCAA",2,49.04,8.38,-2.38,0.24,1.5,1.21,0.03,">1 nonsynonymous","T100R D112H",2
"lib1","SARS-CoV-2","GTAATTTTGAGAGGAA",4,108.59,10.25,-0.51,0.03,2.95,1.01,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","GTAATTTTGGCATAAA",3,47.75,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V32W S36K S129N F167C",4
"lib1","SARS-CoV-2","GTAATTTTTACAAAGT",2,16.02,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","N107H D112L H189R",3
"lib1","SARS-CoV-2","GTAATTTTTGCCTGAT",2,12.07,10.59,-0.18,0.12,2.88,1.04,0.01,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","GTACAAAAAAAGTTAA",2,5.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S S41L T63L A89R",4
"lib1","SARS-CoV-2","GTACAAAAACCAACAA",6,15.17,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","Q84P A105D K114F G155K",4
"lib1","SARS-CoV-2","GTACAAAAAGAGTACT",2,264.9,9.16,-1.61,0.08,2.47,1.1,0,"1 nonsynonymous","N107M",1
"lib1","SARS-CoV-2","GTACAAAAAGCTAGCA",8,65.1,10.5,-0.26,0.03,2.93,1.03,0,">1 nonsynonymous","D98W T201K",2
"lib1","SARS-CoV-2","GTACAAAACACTATCT",2,46.01,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","K94S S113H Y178W A190M",4
"lib1","SARS-CoV-2","GTACAAAATGTATACC",4,93.32,9.98,-0.78,0.09,2.16,1.08,0,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","GTACAAACAAGTACGT",3,92.13,10.1,-0.67,0.08,2.67,1.02,0,">1 nonsynonymous","L57G G152D",2
"lib1","SARS-CoV-2","GTACAAACACAAAGCG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","K56G T201*",2
"lib1","SARS-CoV-2","GTACAAACACCCAACT",3,98.92,9.84,-0.92,0.08,2.25,1.03,0,">1 nonsynonymous","I2L V37K T63W T148P",4
"lib1","SARS-CoV-2","GTACAAACCAGAGACT",1,5.62,7.04,-3.73,0.57,1.5,1.13,0.05,">1 nonsynonymous","A81K R136G F156I",3
"lib1","SARS-CoV-2","GTACAAACGTCTTCGA",2,48.2,10.46,-0.3,0.07,2.86,1.06,0,">1 nonsynonymous","S36K T46I S129V V173F",4
"lib1","SARS-CoV-2","GTACAAACTATGTTAT",11,69.01,6.19,-4.58,0.56,1.5,1.17,0.01,">1 nonsynonymous","G51L N58D T85A A89L L95M P96T F134P Y143T",8
"lib1","SARS-CoV-2","GTACAAACTTAAGGTT",10,96.3,7.45,-3.32,0.23,1.5,1.21,0.01,">1 nonsynonymous","L5W F126P V173L H189L",4
"lib1","SARS-CoV-2","GTACAAAGCAAAGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10Y Y119*",2
"lib1","SARS-CoV-2","GTACAAAGGCCGCGAT",1,53.32,10.47,-0.29,0.05,2.76,1.08,0,">1 nonsynonymous","N130S F134L N151E",3
"lib1","SARS-CoV-2","GTACAAAGGCTTACAA",4,21.75,8.83,-1.93,0.22,1.5,1.14,0.02,">1 nonsynonymous","T3R G9N S41C D90C E135G G166A",6
"lib1","SARS-CoV-2","GTACAAAGTCACAAAC",3,38.81,10.67,-0.09,0.07,2.81,1.13,0,">1 nonsynonymous","D90Q S129G",2
"lib1","SARS-CoV-2","GTACAAAGTCGATGCA",7,15.47,7.66,-3.11,0.37,1.5,1.18,0.06,">1 nonsynonymous","S41Y G51D A105I",3
"lib1","SARS-CoV-2","GTACAAATAATTAACC",4,28.61,10.31,-0.46,0.07,2.84,1.06,0,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","GTACAAATATGACGGA",3,20.48,10.45,-0.31,0.1,2.92,1.05,0.01,"1 nonsynonymous","L162F",1
"lib1","SARS-CoV-2","GTACAAATGATATACA",8,105.08,10.71,-0.06,0.03,2.95,1.01,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","GTACAAATGCTACCGC",6,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K T15H A67H G86R Y119L G146A",6
"lib1","SARS-CoV-2","GTACAACAAGACGAAC",7,77.83,10.68,-0.08,0.05,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GTACAACCAAACACCG",3,69.29,10.7,-0.06,0.08,2.86,1.09,0,">1 nonsynonymous","S43T S53V",2
"lib1","SARS-CoV-2","GTACAACCAAATACAC",8,73.2,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D68L A89L I138G F167H",4
"lib1","SARS-CoV-2","GTACAACCAGCAATCT",3,29.85,9.89,-0.88,0.1,2.05,1.03,0,">1 nonsynonymous","T3M P54W V181C",3
"lib1","SARS-CoV-2","GTACAACCGATACTTG",7,29.46,10.79,0.02,0.13,2.86,1.07,0.01,">1 nonsynonymous","E10S I138L",2
"lib1","SARS-CoV-2","GTACAACCGGACCACA",3,82.2,10.76,0,0.07,2.94,1.03,0,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","GTACAACGATAGCAGC",18,6.18,NA,NA,NA,NA,NA,NA,"stop","C6S W23* N107L",3
"lib1","SARS-CoV-2","GTACAACGCGTCTTCA",1,2.33,NA,NA,NA,NA,NA,NA,"stop","C6M S41* N107S T170M",4
"lib1","SARS-CoV-2","GTACAACGCGTTGACA",2,6.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95C S184L",2
"lib1","SARS-CoV-2","GTACAACGTATCCGTG",10,73.18,8.91,-1.85,0.25,1.61,1.2,0.03,">1 nonsynonymous","N1M T63L Y91V",3
"lib1","SARS-CoV-2","GTACAACGTCACTATA",4,0,NA,NA,NA,NA,NA,NA,"stop","N64Y Y91L G172*",3
"lib1","SARS-CoV-2","GTACAACTACAAGGAA",9,105.82,10.1,-0.67,0.05,2.62,1.03,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","GTACAACTTGAGTCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* A42T D112S P149L K199T",5
"lib1","SARS-CoV-2","GTACAAGAGGCATCAC",3,8.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2Y F8R V65P P177S V181K",5
"lib1","SARS-CoV-2","GTACAAGAGTTTTCAG",5,55.43,9.83,-0.94,0.12,2.07,1.05,0,">1 nonsynonymous","C6R S41L",2
"lib1","SARS-CoV-2","GTACAAGATAACACCG",5,129.85,10.63,-0.14,0.04,2.78,1.05,0,"1 nonsynonymous","F134S",1
"lib1","SARS-CoV-2","GTACAAGTACGCATGC",3,55.26,10.05,-0.71,0.11,2.23,1,0,">1 nonsynonymous","R27S G83V",2
"lib1","SARS-CoV-2","GTACAAGTGATAGCAG",2,9.64,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V77T P82S G101T Y165H",4
"lib1","SARS-CoV-2","GTACAAGTGATGGGAT",2,21.23,9.61,-1.15,0.16,2.03,1.07,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","GTACAATAACTACAAA",7,139.92,6.12,-4.64,0.69,1.5,1.16,0.01,">1 nonsynonymous","R25E S45D T55S I142R",4
"lib1","SARS-CoV-2","GTACAATAACTTTAGA",2,1.83,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","GTACAATACCCAACGG",10,72.2,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167C",1
"lib1","SARS-CoV-2","GTACAATAGGCACAAC",8,7.44,NA,NA,NA,NA,NA,NA,"stop","S129* Q176R",2
"lib1","SARS-CoV-2","GTACAATATAAGCACA",4,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V D34L L95S",3
"lib1","SARS-CoV-2","GTACAATATTGCAAAG",3,28.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y66T C150F P161S",3
"lib1","SARS-CoV-2","GTACAATCAATACATA",2,2.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105E",1
"lib1","SARS-CoV-2","GTACAATCCTTGAGTG",4,62.03,9.01,-1.75,0.16,1.5,1.1,0.01,">1 nonsynonymous","R25V Q168F",2
"lib1","SARS-CoV-2","GTACAATCGCATATGT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S A42S",2
"lib1","SARS-CoV-2","GTACAATCTACCCCAA",1,9.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P7T D90H Y143R C150F A190V",5
"lib1","SARS-CoV-2","GTACAATCTTTATTAA",8,122.81,10.31,-0.45,0.05,2.93,1.03,0,">1 nonsynonymous","F8L I138G G196W",3
"lib1","SARS-CoV-2","GTACAATGATATCACA",3,15.39,10.13,-0.63,0.15,2.65,1.08,0.01,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","GTACAATTCAATGAAT",6,0.53,NA,NA,NA,NA,NA,NA,"stop","A67H G86* P96F F156A K198F",5
"lib1","SARS-CoV-2","GTACAATTCAGCCCAA",2,32.16,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","GTACAATTCCTATAAA",6,73.45,10.22,-0.55,0.04,2.83,1,0,">1 nonsynonymous","T3W K87S",2
"lib1","SARS-CoV-2","GTACACAAAAATGCGA",8,214.05,10.26,-0.51,0.05,2.84,1.01,0,">1 nonsynonymous","Y35H T100I",2
"lib1","SARS-CoV-2","GTACACAAAAGAAAGT",1,1.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58I",1
"lib1","SARS-CoV-2","GTACACAAGAAGAACC",12,34.87,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V20L N24R P54R S108K N120H",5
"lib1","SARS-CoV-2","GTACACAATGATTCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2H E10H C61T D68Q N151C Y175I E186N P197*",8
"lib1","SARS-CoV-2","GTACACAATTGCCATG",7,272.38,9.78,-0.99,0.08,2.02,1.09,0,">1 nonsynonymous","I28G K56R N151L K198I",4
"lib1","SARS-CoV-2","GTACACAGTGAAGCAA",2,24.82,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L38A Y50I N92F",3
"lib1","SARS-CoV-2","GTACACAGTTAGGTAA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","T46M Y165T C195*",3
"lib1","SARS-CoV-2","GTACACATAATTGTGG",1,2.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","GTACACATCTCCCAAC",3,0.77,NA,NA,NA,NA,NA,NA,"stop","Y93* L162T",2
"lib1","SARS-CoV-2","GTACACCAAACGCATT",1,35.31,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T46N G74N K87R R179S",4
"lib1","SARS-CoV-2","GTACACCACGAGACAC",13,86.07,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V65M D97E W106E R127S",4
"lib1","SARS-CoV-2","GTACACCACGGTATCG",1,2.4,NA,NA,NA,NA,NA,NA,"stop","S29* K48V",2
"lib1","SARS-CoV-2","GTACACCAGGGTCTAC",5,67.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N24S L95S",2
"lib1","SARS-CoV-2","GTACACCATCTCTGAG",1,57.02,10.78,0.02,0.05,2.86,1.05,0,"1 nonsynonymous","N130A",1
"lib1","SARS-CoV-2","GTACACCGTTGGCACA",6,82.49,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45C A89G V103L",3
"lib1","SARS-CoV-2","GTACACCTATTGTCAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W N107G",2
"lib1","SARS-CoV-2","GTACACCTCGATTCCC",3,48.4,10.82,0.05,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACACCTCGTAAACT",2,31.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99S Y121E",2
"lib1","SARS-CoV-2","GTACACGCCCTTTTAA",1,29.5,6,-4.76,1.53,1.5,1.16,0.01,">1 nonsynonymous","V37F C61N N92I N130R T140L",5
"lib1","SARS-CoV-2","GTACACGCTCCATTAA",8,101.5,10.7,-0.06,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACACGGACTATAAC",9,85.37,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S19Q F44T T100G",3
"lib1","SARS-CoV-2","GTACACGTGAAATGGC",8,120.12,10.67,-0.1,0.06,2.82,1.15,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","GTACACTAAGTTAATA",4,92.69,9.7,-1.07,0.1,2.51,1.05,0,">1 nonsynonymous","Y35L G51C N110M L125F",4
"lib1","SARS-CoV-2","GTACACTAGCACTTAG",10,95.86,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40W S147Y F167A",3
"lib1","SARS-CoV-2","GTACACTCCACGAGCT",8,87.52,6.2,-4.56,0.92,1.5,1.22,0.03,">1 nonsynonymous","Q144K F167L Y178W T201S",4
"lib1","SARS-CoV-2","GTACACTGTAATAGAT",7,108.99,10.77,0,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACACTGTTATTAGT",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y Y91I D112V K128T L183A",5
"lib1","SARS-CoV-2","GTACACTTAATTTACA",3,24.11,10.82,0.06,0.08,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACACTTACACAGTG",1,21.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N S36R Y93W N109S G172C",5
"lib1","SARS-CoV-2","GTACACTTGCCTCTTT",1,7.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A F44T D90M",3
"lib1","SARS-CoV-2","GTACACTTTGTTCGTA",1,25.24,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R73T N92P K128E R179V K199S",5
"lib1","SARS-CoV-2","GTACAGAAAAGGCCGT",3,67.9,6,-4.76,0.77,1.5,1.16,0.01,">1 nonsynonymous","F12I C61D G86I",3
"lib1","SARS-CoV-2","GTACAGAACTTGTGGC",9,80.26,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F134K G146R V153P",3
"lib1","SARS-CoV-2","GTACAGAAGTAGACAA",1,141.62,9.3,-1.46,0.1,1.8,1.11,0,">1 nonsynonymous","D97G K128F N151P",3
"lib1","SARS-CoV-2","GTACAGACACAATATA",8,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P F99V Y165I",3
"lib1","SARS-CoV-2","GTACAGAGATCGAATG",2,43.55,8.42,-2.35,0.17,1.77,1.17,0.01,">1 nonsynonymous","K56L G116W R136Q T170F",4
"lib1","SARS-CoV-2","GTACAGAGATGCGGGC",2,16.68,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83F T100P",2
"lib1","SARS-CoV-2","GTACAGCAAAAAACTA",6,1280.48,9.74,-1.02,0.08,1.95,1.05,0,">1 nonsynonymous","L5S F17V K128I",3
"lib1","SARS-CoV-2","GTACAGCATATAACTC",7,2.74,NA,NA,NA,NA,NA,NA,"stop","S113* E141N G174*",3
"lib1","SARS-CoV-2","GTACAGCCGTTGAGAA",6,132.3,8.41,-2.35,0.1,2.81,1.11,0,">1 nonsynonymous","V37R L125T E141K P169D L187T",5
"lib1","SARS-CoV-2","GTACAGCCTATTAGAT",1,7.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95P N107Y",2
"lib1","SARS-CoV-2","GTACAGCGGCCTTGGT",8,190.38,10.79,0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACAGCTGCCACGGT",5,70.17,9.74,-1.03,0.09,2.19,1.07,0,">1 nonsynonymous","A14G C31S",2
"lib1","SARS-CoV-2","GTACAGGAAAATTAGC",1,34.22,9.8,-0.96,0.09,2.88,1,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","GTACAGGAACGATTAA",5,3.6,NA,NA,NA,NA,NA,NA,"stop","F44P Y175* L183G",3
"lib1","SARS-CoV-2","GTACAGGAGAATTGAC",6,46.21,7.03,-3.74,0.39,1.5,1.14,0.03,">1 nonsynonymous","G83R Y175I",2
"lib1","SARS-CoV-2","GTACAGGATAGGACCC",3,0,NA,NA,NA,NA,NA,NA,"stop","T3G A42N F47I N130* T170L L187T",6
"lib1","SARS-CoV-2","GTACAGGGTCACTAAT",3,31.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R16G S36G L95Y Y165I V181E A192V P197S",7
"lib1","SARS-CoV-2","GTACAGGTGGACCTAC",1,68.8,10.02,-0.74,0.05,2.87,1.01,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","GTACAGTAAATGCTAA",4,11.79,10.16,-0.6,0.33,2.05,1.17,0.03,">1 nonsynonymous","S19G K48M S200K",3
"lib1","SARS-CoV-2","GTACAGTAACTTGCAC",4,13.71,7.19,-3.58,0.47,1.5,1.2,0.04,">1 nonsynonymous","S43V A89H F99T T201R",4
"lib1","SARS-CoV-2","GTACATACGTTACTAG",1,3.91,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib1","SARS-CoV-2","GTACATAGAGTAAAAG",5,27.79,6.93,-3.84,0.2,1.89,1.21,0.01,">1 nonsynonymous","N120E C150Y",2
"lib1","SARS-CoV-2","GTACATATACGATGTA",2,29.94,10.73,-0.03,0.07,2.8,1.15,0,">1 nonsynonymous","N64Y N110L",2
"lib1","SARS-CoV-2","GTACATATACTATCAC",8,183.83,10.73,-0.04,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACATATAGATTAAC",9,161.66,10.76,0,0.05,2.89,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GTACATATCCCAGTGT",13,1.6,NA,NA,NA,NA,NA,NA,"stop","N13Q S29F Y39* D97N R136V",5
"lib1","SARS-CoV-2","GTACATCAACTTACAT",1,92.22,8.08,-2.68,0.15,2.2,1.11,0.01,">1 nonsynonymous","G172A T201H",2
"lib1","SARS-CoV-2","GTACATCACACCAGTG",5,172.58,10.75,-0.02,0.05,2.94,1.03,0,"1 nonsynonymous","Y50F",1
"lib1","SARS-CoV-2","GTACATCACCACAAAA",2,122,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D59S Q84L P177R",3
"lib1","SARS-CoV-2","GTACATCACTAATATA",11,68.2,6.33,-4.43,0.53,1.5,1.18,0.02,">1 nonsynonymous","Y50S K94F I104V T170S",4
"lib1","SARS-CoV-2","GTACATCCAATACACC",7,61.91,6.27,-4.49,0.58,1.5,1.23,0.02,">1 nonsynonymous","F8M A14T D137E P149R V153E",5
"lib1","SARS-CoV-2","GTACATCCGAGCTACG",4,31.48,6.05,-4.71,0.63,3,1.23,0.02,">1 nonsynonymous","Y123T G152F Y159L",3
"lib1","SARS-CoV-2","GTACATCCTATTTATG",3,2.95,NA,NA,NA,NA,NA,NA,"stop","R73* S139C F156L Q176S",4
"lib1","SARS-CoV-2","GTACATGACAAGCGAC",6,93.94,8.76,-2.01,0.14,1.94,1.14,0.01,">1 nonsynonymous","Y39C T55G S129C G152V",4
"lib1","SARS-CoV-2","GTACATGATAACTAGC",3,45.13,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S43G D98G G116S Q163H F167S",5
"lib1","SARS-CoV-2","GTACATGATGGAAAAC",1,99.87,10.23,-0.54,0.04,2.88,1.04,0,">1 nonsynonymous","T46S K56L Q144D",3
"lib1","SARS-CoV-2","GTACATGCATCCAATT",2,17.4,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T3W V37Y D112N",3
"lib1","SARS-CoV-2","GTACATGCCCATACAA",5,14.27,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49R D137S",2
"lib1","SARS-CoV-2","GTACATGTGTAGTCCT",6,44.37,10.14,-0.62,0.12,2.57,1.05,0.01,">1 nonsynonymous","K128R S139L",2
"lib1","SARS-CoV-2","GTACATGTGTGAAGCC",4,67.05,10.71,-0.06,0.06,2.94,1.02,0,">1 nonsynonymous","V32Q N64E",2
"lib1","SARS-CoV-2","GTACATTAAGTCCGGT",2,123.28,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","E10A K56V P177L",3
"lib1","SARS-CoV-2","GTACATTACACACCCT",8,113883.64,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","T63V S164V G172M T201N",4
"lib1","SARS-CoV-2","GTACATTATAAAAACG",1,26.65,9.58,-1.19,0.06,2.85,1.05,0,">1 nonsynonymous","Y91F T170E",2
"lib1","SARS-CoV-2","GTACATTCAGGATTGT",4,115.74,9.91,-0.85,0.08,2.23,1.07,0,">1 nonsynonymous","S29L S43L L122H S139M",4
"lib1","SARS-CoV-2","GTACATTGACGGTGAA",2,15.02,9.81,-0.96,0.12,2.63,1,0.01,">1 nonsynonymous","V103I G152S S164F T201N",4
"lib1","SARS-CoV-2","GTACATTGGTACTCTC",4,64.22,10.8,0.04,0.08,2.87,1.08,0,"1 nonsynonymous","K132E",1
"lib1","SARS-CoV-2","GTACATTGTGAAAAGA",1,72.91,8.1,-2.66,0.12,2.31,1.13,0,">1 nonsynonymous","N130Y Y175R",2
"lib1","SARS-CoV-2","GTACATTTCAATATTA",5,65.12,6.69,-4.08,0.43,1.5,1.1,0.03,">1 nonsynonymous","L95M N107T K114S Y143R G152I",5
"lib1","SARS-CoV-2","GTACCAAAAGAAGCCA",2,55.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P82G T100I G152H P177F",4
"lib1","SARS-CoV-2","GTACCAAAATGCGCGT",2,70.79,10.75,-0.01,0.08,2.9,1.06,0,"1 nonsynonymous","F62Y",1
"lib1","SARS-CoV-2","GTACCAAAGAACAGTA",6,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63D K132S G155C R179G",4
"lib1","SARS-CoV-2","GTACCAAAGCTGAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24P N58T N107E T148V P169S",5
"lib1","SARS-CoV-2","GTACCAACAAAGTGAT",4,15.16,9.48,-1.29,0.18,2.73,1.08,0.01,">1 nonsynonymous","I80V S129C E141G P149S",4
"lib1","SARS-CoV-2","GTACCAACGACTAGGA",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R F99T",2
"lib1","SARS-CoV-2","GTACCAAGAAGTTTAG",1,13.73,10.47,-0.29,0.09,2.8,1.18,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","GTACCAAGATAAAGTA",4,60.34,9.87,-0.89,0.08,2.08,1.01,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GTACCAAGCTATAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V S41C F99L K132L P161H T201R",6
"lib1","SARS-CoV-2","GTACCAAGTACACCCG",3,37.43,8.76,-2.01,0.18,1.51,1.18,0.02,">1 nonsynonymous","N4M N107T",2
"lib1","SARS-CoV-2","GTACCAAGTAGACCGA",4,121,10.71,-0.06,0.03,2.96,1.02,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","GTACCAAGTGTGCCAA",5,127.27,9.24,-1.52,0.05,2.88,1.09,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","GTACCAATAAAACATA",5,46.16,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D59T Y119V D137P G172V",4
"lib1","SARS-CoV-2","GTACCAATACTATTAA",7,57.73,9.99,-0.78,0.07,2.82,1.05,0,">1 nonsynonymous","G146E N171V",2
"lib1","SARS-CoV-2","GTACCAATTATTATTC",8,36.7,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F99G I104L N151G",3
"lib1","SARS-CoV-2","GTACCACCCAACTGGT",7,134.27,9.82,-0.94,0.12,2.14,1.06,0,">1 nonsynonymous","C31R A81G",2
"lib1","SARS-CoV-2","GTACCACCGCGTTACT",10,58.04,6,-4.76,1.63,1.5,1.17,0.01,">1 nonsynonymous","D112S G152Y",2
"lib1","SARS-CoV-2","GTACCACCGTAAGCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35V T55Y L122*",3
"lib1","SARS-CoV-2","GTACCACGCGAACAAA",1,33.71,10.54,-0.23,0.04,2.92,1.04,0,"1 nonsynonymous","K94A",1
"lib1","SARS-CoV-2","GTACCAGAGTTTGATA",1,12.91,10.02,-0.74,0.16,2.34,1.06,0.01,">1 nonsynonymous","V37A Q84T L122N R136S",4
"lib1","SARS-CoV-2","GTACCAGCAATCTATT",5,47.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32Y C61A T140R Y165T",4
"lib1","SARS-CoV-2","GTACCAGCACATGTAA",3,1.09,NA,NA,NA,NA,NA,NA,"stop","N92* W106E",2
"lib1","SARS-CoV-2","GTACCAGCGACCCCCT",2,37.73,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K26R R124N",2
"lib1","SARS-CoV-2","GTACCAGCTAGAAAAC",3,12.23,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","D90S G101A N107P L131S",4
"lib1","SARS-CoV-2","GTACCAGTACATGACA",2,80.54,10.7,-0.07,0.04,2.9,1.03,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","GTACCAGTTACTGAAA",1,25.96,7.54,-3.22,0.3,1.5,1.17,0.03,">1 nonsynonymous","V32E Y50Q",2
"lib1","SARS-CoV-2","GTACCAGTTCCCCATA",4,45.15,10.76,0,0.09,2.86,1.09,0,"1 nonsynonymous","N24R",1
"lib1","SARS-CoV-2","GTACCAGTTGCGCTAT",5,109.14,10.07,-0.69,0.06,2.87,1.07,0,"1 nonsynonymous","Y175H",1
"lib1","SARS-CoV-2","GTACCATATTACGCCG",12,2.28,NA,NA,NA,NA,NA,NA,"stop","F12I D34G A42F I88S D97* D112L Y119P Y159W",8
"lib1","SARS-CoV-2","GTACCATTAAAACCAA",3,12.67,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C102R P149L",2
"lib1","SARS-CoV-2","GTACCATTCGACAGAA",11,7.04,NA,NA,NA,NA,NA,NA,"stop","C49Q K199*",2
"lib1","SARS-CoV-2","GTACCATTGTTAGTCA",8,43.05,10.8,0.04,0.05,2.94,1.03,0,"1 nonsynonymous","K26M",1
"lib1","SARS-CoV-2","GTACCCAATGCTGAGG",1,31.91,10.68,-0.08,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACCCACAATATAAT",2,17.04,8.65,-2.12,0.08,2.46,1.03,0,">1 nonsynonymous","K87E F99Y",2
"lib1","SARS-CoV-2","GTACCCACCGGATGAT",1,21.29,10.94,0.18,0.07,2.86,1.11,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","GTACCCAGAAGCCACT",1,13.42,6,-4.76,1.29,1.5,1.2,0.02,">1 nonsynonymous","Y35R Y119L C150S F160L G172S",5
"lib1","SARS-CoV-2","GTACCCAGATCTCGGA",1,1.45,NA,NA,NA,NA,NA,NA,"stop","L60A S69* L125R Q144G",4
"lib1","SARS-CoV-2","GTACCCATAAAAAAAG",12,121.27,7.88,-2.89,0.25,1.5,1.17,0.02,">1 nonsynonymous","N24H D90Y N118L",3
"lib1","SARS-CoV-2","GTACCCATCGTTCCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I K114V N120G E186Y",4
"lib1","SARS-CoV-2","GTACCCCCGTATCAAG",1,41.07,9.67,-1.09,0.1,2.19,1.16,0,"1 nonsynonymous","D75P",1
"lib1","SARS-CoV-2","GTACCCCGTATCGAAG",5,10.74,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L60Q K87Q L122V V182L",4
"lib1","SARS-CoV-2","GTACCCCGTGCCCATC",2,16.77,10.78,0.02,0.08,2.97,1,0,"1 nonsynonymous","K94H",1
"lib1","SARS-CoV-2","GTACCCGAATTCCAAG",1,6.3,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5W V32S P54H R78H A81V F99Q F134I C158Y",8
"lib1","SARS-CoV-2","GTACCCGATAGAGGCT",5,54.87,8.95,-1.82,0.08,2.84,1.07,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","GTACCCGGTTGCTTAG",6,25.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7L F99T",2
"lib1","SARS-CoV-2","GTACCCGTTAAAATAA",4,22.8,6,-4.76,2,3,1.19,0.01,"1 nonsynonymous","F70R",1
"lib1","SARS-CoV-2","GTACCCTAAAGCTTGC",1,12.35,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G101V S108P K114N K128G T140F F160R S184N",7
"lib1","SARS-CoV-2","GTACCCTAAAGTTCAT",5,48.63,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","A89M S113T",2
"lib1","SARS-CoV-2","GTACCCTAACATAGCA",15,138.08,10.13,-0.64,0.04,2.93,1.02,0,">1 nonsynonymous","N40T F160T T170S",3
"lib1","SARS-CoV-2","GTACCCTACCTATGAA",2,59.43,9.28,-1.49,0.1,2.88,1.1,0,">1 nonsynonymous","Y39V T63Y I138N F160R G166V K198S",6
"lib1","SARS-CoV-2","GTACCCTCAAAAAGTA",2,59.4,10.48,-0.29,0.11,2.6,1.14,0.01,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","GTACCCTTACTGTTTT",2,144.2,10.32,-0.44,0.03,2.88,1.03,0,">1 nonsynonymous","G83A D98K",2
"lib1","SARS-CoV-2","GTACCCTTTCTATCTG",6,99.08,10.76,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACCGAAATTATAAA",3,113.53,10.35,-0.41,0.05,2.86,1.04,0,">1 nonsynonymous","Y39S N130W",2
"lib1","SARS-CoV-2","GTACCGAACATGGCTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V L57N V77Y Q144K",4
"lib1","SARS-CoV-2","GTACCGATGAATAAAT",5,42.74,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6A R73G G166W K198N",4
"lib1","SARS-CoV-2","GTACCGCCAAAAGAAG",5,0.46,NA,NA,NA,NA,NA,NA,"stop","L57V G117* F134N",3
"lib1","SARS-CoV-2","GTACCGCCAACGGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K48I Y91V D98* N120L",4
"lib1","SARS-CoV-2","GTACCGGAAGGAATAG",2,30.25,9.12,-1.65,0.36,1.64,1.13,0.05,">1 nonsynonymous","F160Q L183C",2
"lib1","SARS-CoV-2","GTACCGGACATTTTAG",6,135.89,10.72,-0.05,0.04,2.94,1,0,">1 nonsynonymous","A22R K132A",2
"lib1","SARS-CoV-2","GTACCGTACAGAACAT",1,30.55,10.71,-0.06,0.04,2.9,1.08,0,"1 nonsynonymous","N64V",1
"lib1","SARS-CoV-2","GTACCGTATAGCGAAT",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R I88F Y119T",3
"lib1","SARS-CoV-2","GTACCGTTATAGTCCG",9,133.4,10.8,0.04,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACCGTTGAACGCTG",1,18.78,6,-4.76,1.86,3,1.11,0,">1 nonsynonymous","E10N P149I G172R",3
"lib1","SARS-CoV-2","GTACCTAACAATAAAA",2,60.13,10.24,-0.52,0.06,3,1,0,">1 nonsynonymous","V37K G174E",2
"lib1","SARS-CoV-2","GTACCTAATTTATTGT",3,1.52,NA,NA,NA,NA,NA,NA,"stop","E10S V52Y N107V S113V L122G L131* Y175F",7
"lib1","SARS-CoV-2","GTACCTACATAATCAT",4,21.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A33E N64R G86I T148E Q168R",5
"lib1","SARS-CoV-2","GTACCTACGTTAAAAC",3,43.96,8.7,-2.06,0.09,2.95,1.08,0,">1 nonsynonymous","N1P A105S Y159M",3
"lib1","SARS-CoV-2","GTACCTAGAACTACGT",1,25.87,10.14,-0.62,0.1,2.92,1,0.01,">1 nonsynonymous","F156T E186D",2
"lib1","SARS-CoV-2","GTACCTAGGAATATAC",6,94.65,10.87,0.11,0.09,2.87,1.07,0,"1 nonsynonymous","S164K",1
"lib1","SARS-CoV-2","GTACCTATAGAATACA",2,20.4,10.89,0.12,0.08,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACCTATCAAGCATT",3,22.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V32P R78F G86D Y121T F134N",5
"lib1","SARS-CoV-2","GTACCTATGATCACCA",10,67.97,8.81,-1.95,0.2,1.59,1.14,0.02,">1 nonsynonymous","C6P D90Y",2
"lib1","SARS-CoV-2","GTACCTATTTACAGAC",11,122.04,6,-4.76,0.75,1.5,1.13,0,">1 nonsynonymous","Y143P V194I",2
"lib1","SARS-CoV-2","GTACCTCAAATTGAAG",5,46.45,10.75,-0.02,0.08,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACCTCAGACTCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5N V37* F99* W106Q T170M",5
"lib1","SARS-CoV-2","GTACCTCATGAATATT",5,1.92,NA,NA,NA,NA,NA,NA,"stop","T55S L95Y W106V Y119* F156S",5
"lib1","SARS-CoV-2","GTACCTCCGCGGCACA",5,95.21,9.73,-1.03,0.04,2.79,1.07,0,">1 nonsynonymous","N40T P149Y E154L",3
"lib1","SARS-CoV-2","GTACCTCTTACCGTTG",4,35.22,10.75,-0.01,0.04,2.96,1.02,0,">1 nonsynonymous","T3E Y39K K128P",3
"lib1","SARS-CoV-2","GTACCTGAAAAAACTT",1,0.4,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib1","SARS-CoV-2","GTACCTGACATATTAG",3,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28P L38R D90S",3
"lib1","SARS-CoV-2","GTACCTGAGTGAGTTT",5,44.65,9.9,-0.86,0.14,2.07,1.08,0.01,">1 nonsynonymous","N4L Q84I S139R",3
"lib1","SARS-CoV-2","GTACGAAAAAAACCAA",9,6.98,10.65,-0.12,0.55,2.4,1,0.08,">1 nonsynonymous","D34M T63S G101L L131D T140R",5
"lib1","SARS-CoV-2","GTACGAAACCGATGAC",2,5.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I C102T L183P",3
"lib1","SARS-CoV-2","GTACGAAACTAAAATC",1,24.37,9.23,-1.54,0.2,1.7,1.14,0.01,"1 nonsynonymous","F8R",1
"lib1","SARS-CoV-2","GTACGAACGAAAAAAA",3,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H G51C C158Y",3
"lib1","SARS-CoV-2","GTACGAACGAGATAAC",2,23.37,10.68,-0.09,0.1,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACGAAGAAAGCTCC",14,71.58,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T85R Y93S",2
"lib1","SARS-CoV-2","GTACGAATTAAGTTAG",2,30.83,10.71,-0.05,0.08,2.95,1,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","GTACGACATAGAGCAA",7,101.33,6,-4.76,2,2.2,1.19,0.01,"1 nonsynonymous","I80K",1
"lib1","SARS-CoV-2","GTACGACCCGTTTAAC",5,43.39,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5V D68K K87N T201S",4
"lib1","SARS-CoV-2","GTACGAGAAGCAAGCC",4,54.58,10.23,-0.54,0.05,2.85,1,0,">1 nonsynonymous","K26L V37N A105T",3
"lib1","SARS-CoV-2","GTACGAGAGAGCTCAA",3,61.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D112P S184C H189Y",3
"lib1","SARS-CoV-2","GTACGAGATAGATTCC",8,85.54,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L38C C61L Q168L",3
"lib1","SARS-CoV-2","GTACGAGATTACCATT",5,45.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T55G D59H S108L P133H",4
"lib1","SARS-CoV-2","GTACGAGGATTAATAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","D68L L95A V103*",3
"lib1","SARS-CoV-2","GTACGAGTACAAAAAT",2,6.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R G51Y A105S Y123P",4
"lib1","SARS-CoV-2","GTACGAGTTACACCAA",11,111.63,10.29,-0.47,0.05,2.93,1.01,0,">1 nonsynonymous","C61L F126L",2
"lib1","SARS-CoV-2","GTACGATAAAGCATAT",10,143.37,6.18,-4.58,0.33,2.09,1.15,0,">1 nonsynonymous","K56A C158L",2
"lib1","SARS-CoV-2","GTACGATCAGGTTCCT",7,100.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23T V37E D90R R136C",4
"lib1","SARS-CoV-2","GTACGATCATTCTCAC",4,23.58,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35S K48S N118H F160R T170F",5
"lib1","SARS-CoV-2","GTACGATCATTTACTA",2,8.06,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5S P82Q K114T T201S",4
"lib1","SARS-CoV-2","GTACGATTATAGGTGT",2,2.09,NA,NA,NA,NA,NA,NA,"stop","S129* R136P",2
"lib1","SARS-CoV-2","GTACGCAATAGACCCA",2,48.08,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T3F S41N N92Y",3
"lib1","SARS-CoV-2","GTACGCACAGACACCT",9,30.01,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","C6S A22V F62D",3
"lib1","SARS-CoV-2","GTACGCATCTCTTATA",6,23.66,6,-4.76,2,2.03,1.17,0.01,">1 nonsynonymous","C6S F62G F99R V181A",4
"lib1","SARS-CoV-2","GTACGCCAACTGTGGG",1,7.45,8.24,-2.52,0.24,2.25,1.21,0.01,">1 nonsynonymous","S53F T63M Y159P",3
"lib1","SARS-CoV-2","GTACGCCACATTCGGG",4,29.75,6.54,-4.22,0.58,1.5,1.1,0.04,">1 nonsynonymous","T3E E10S G117D Y121F A145L",5
"lib1","SARS-CoV-2","GTACGCCCCAGGTATA",9,111,10.51,-0.25,0.05,2.9,1.04,0,"1 nonsynonymous","I138G",1
"lib1","SARS-CoV-2","GTACGCCCTTATGTTG",3,8.95,7.89,-2.88,0.34,1.82,1.15,0.05,"1 nonsynonymous","N157I",1
"lib1","SARS-CoV-2","GTACGCCTTGTTCCTA",12,284.7,9.13,-1.63,0.08,2.35,1.11,0,">1 nonsynonymous","Y165I K198T",2
"lib1","SARS-CoV-2","GTACGCTACAAGCATA",9,14.72,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1I N13W T63I K87N R127N S139G",6
"lib1","SARS-CoV-2","GTACGCTATAAAAGCT",3,204.51,6,-4.76,1.69,1.5,1.18,0.01,">1 nonsynonymous","F47W K56V G86V",3
"lib1","SARS-CoV-2","GTACGCTGATCCTAAA",2,10.62,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G86K W106Q S139H P197L",4
"lib1","SARS-CoV-2","GTACGCTTGATAAGTG",3,28.74,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","I2L N109W P177Q",3
"lib1","SARS-CoV-2","GTACGCTTTCCTTCAA",1,5.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107V E141I",2
"lib1","SARS-CoV-2","GTACGGACGCTGCATT",7,217.04,6,-4.76,2,3,1.18,0,">1 nonsynonymous","L5E Y39S F44C A81C K94E I104S L122S P133L F156R",9
"lib1","SARS-CoV-2","GTACGGACGTGAGCTT",3,11.51,10.7,-0.07,0.15,2.73,1.16,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","GTACGGAGAATCTCAA",1,16.09,10.92,0.16,0.48,1.76,1.11,0.07,">1 nonsynonymous","F8S G101S K132M",3
"lib1","SARS-CoV-2","GTACGGATAGGTTACA",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43P E141R G152C",3
"lib1","SARS-CoV-2","GTACGGATCGGGGATA",2,353.9,10.75,-0.01,0.06,2.96,1.03,0,">1 nonsynonymous","L5K P54H",2
"lib1","SARS-CoV-2","GTACGGGAAACAGAAT",1,0.98,NA,NA,NA,NA,NA,NA,"stop","F17S K56H P82* G86K T170R",5
"lib1","SARS-CoV-2","GTACGGGATCCCAAAT",4,40.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S19T P82I W106L N120C K198M",5
"lib1","SARS-CoV-2","GTACGGGGTTACTCGA",16,103.8,6,-4.76,1.72,1.5,1.17,0.02,">1 nonsynonymous","F12S D59W P133M P161L",4
"lib1","SARS-CoV-2","GTACGGTAACCACACA",5,22.67,7.26,-3.5,0.24,1.5,1.09,0.02,">1 nonsynonymous","S19R F44S T63N",3
"lib1","SARS-CoV-2","GTACGGTCACGTAAAG",8,157.18,10.02,-0.74,0.06,2.88,1.01,0,">1 nonsynonymous","L60F T170K",2
"lib1","SARS-CoV-2","GTACGGTTTAAACTTT",8,4.72,NA,NA,NA,NA,NA,NA,"stop","S19A T100Q A145*",3
"lib1","SARS-CoV-2","GTACGTAAAACGCTAA",5,58.26,10.81,0.04,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACGTAAAATAAAAT",1,47.59,9.9,-0.86,0.1,2.04,1.04,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","GTACGTAAACGAAAAT",3,0.34,NA,NA,NA,NA,NA,NA,"stop","I2L N40* P82Q V173I",4
"lib1","SARS-CoV-2","GTACGTAAAGTTTCGT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N4G F44N T85K D98N C195*",5
"lib1","SARS-CoV-2","GTACGTAATAAAGTAC",2,8.03,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","L5F E10F C31N G86T N107R G146L S184P",7
"lib1","SARS-CoV-2","GTACGTAGACGACAGG",2,13.59,10.81,0.04,0.12,2.78,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACGTAGCCAGTCAA",5,47.26,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S41W G86E D112L L125C Q176F",5
"lib1","SARS-CoV-2","GTACGTAGCCGTCCCT",1,48.51,10.76,0,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACGTATCGGATATG",1,14.6,8.57,-2.19,0.24,1.5,1,0.03,"1 nonsynonymous","D137W",1
"lib1","SARS-CoV-2","GTACGTATCTGCCACC",1,15.61,9.33,-1.43,0.09,2.84,1.1,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","GTACGTATGAAGGGCT",1,7.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74H P197S",2
"lib1","SARS-CoV-2","GTACGTCAAAGATACA",5,54.42,7.8,-2.97,0.37,1.5,1.02,0.04,">1 nonsynonymous","V77L T85L Y121T A192T",4
"lib1","SARS-CoV-2","GTACGTCACTAATCTC",5,143.45,8.87,-1.89,0.07,2.74,1.06,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","GTACGTCCACTAGTTA",2,1.06,NA,NA,NA,NA,NA,NA,"stop","N40* G155I",2
"lib1","SARS-CoV-2","GTACGTCCCGCCTCAG",2,31.76,9.19,-1.58,0.19,2.69,1.14,0.03,">1 nonsynonymous","T15G Y119P",2
"lib1","SARS-CoV-2","GTACGTCCCGTTACAC",3,53.52,10.39,-0.37,0.05,2.91,1.01,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","GTACGTGATATCACTT",9,2.53,NA,NA,NA,NA,NA,NA,"stop","N64A A81* V103T Y123K L162E Q168V",6
"lib1","SARS-CoV-2","GTACGTGATCATACAG",5,32.47,9.78,-0.98,0.11,2.58,1.03,0.01,">1 nonsynonymous","I2N S41P G152P",3
"lib1","SARS-CoV-2","GTACGTGCATGCAGTG",10,140.75,10.73,-0.03,0.04,2.89,1.06,0,">1 nonsynonymous","L131V T201K",2
"lib1","SARS-CoV-2","GTACGTTAACCCCAAC",1,24.39,9.29,-1.47,0.12,2.68,1.07,0.01,">1 nonsynonymous","V37L T148L T170L",3
"lib1","SARS-CoV-2","GTACGTTATGAGTTAA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M L183D",2
"lib1","SARS-CoV-2","GTACGTTCACGGTTAC",4,132.61,9.97,-0.8,0.09,2.13,1.04,0,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","GTACTAAAAAACGGAG",1,0.64,NA,NA,NA,NA,NA,NA,"stop","N30C V77L N120* E141C L183N",5
"lib1","SARS-CoV-2","GTACTAAAAAATAATG",5,81.28,8.57,-2.19,0.08,2.42,1.08,0,">1 nonsynonymous","D75V E141Y F156T",3
"lib1","SARS-CoV-2","GTACTAAAAGCTACTA",3,0,NA,NA,NA,NA,NA,NA,"stop","I2V K26S N40* W106L",4
"lib1","SARS-CoV-2","GTACTAAATAGATCCT",1,0.29,NA,NA,NA,NA,NA,NA,"stop","C61Y G83Y P133L G166*",4
"lib1","SARS-CoV-2","GTACTAAATCTATGGA",2,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H C49R F70L L95H V153A T201Y",6
"lib1","SARS-CoV-2","GTACTAACAAAACCAT",7,110.58,8.74,-2.03,0.19,1.5,1.11,0.01,">1 nonsynonymous","K132N L162H K199E",3
"lib1","SARS-CoV-2","GTACTAACTTTCTTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Y V77L N92* T148H",4
"lib1","SARS-CoV-2","GTACTAAGAACACGGA",4,83.25,10.72,-0.05,0.1,2.9,1.04,0,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","GTACTAAGCGTACTAG",2,17.56,8.49,-2.28,0.3,1.5,1.05,0.04,">1 nonsynonymous","F12L T55C C102L",3
"lib1","SARS-CoV-2","GTACTAAGTAAACCGA",10,314.57,6.47,-4.3,0.29,1.5,1.17,0.01,">1 nonsynonymous","V37M E154N C158L",3
"lib1","SARS-CoV-2","GTACTAATCACGATTT",11,173.09,8.55,-2.21,0.1,2.92,1,0,">1 nonsynonymous","K56N G166D P191N S200V",4
"lib1","SARS-CoV-2","GTACTAATTCATGTTT",9,258.24,9.98,-0.79,0.08,2.17,1.02,0,">1 nonsynonymous","V52A Q84L",2
"lib1","SARS-CoV-2","GTACTAATTGATCCGT",5,3.96,NA,NA,NA,NA,NA,NA,"stop","C61V S113* Y121S V180N",4
"lib1","SARS-CoV-2","GTACTAATTGTGCCAA",5,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C G51H F167C L183S",4
"lib1","SARS-CoV-2","GTACTACAAAAATTTA",1,11.03,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","E10I K48H N92G",3
"lib1","SARS-CoV-2","GTACTACCATTTTGAT",3,68.43,8.66,-2.1,0.08,2.66,1.16,0,"1 nonsynonymous","I142D",1
"lib1","SARS-CoV-2","GTACTACCGCGCGTCC",7,161.54,8.16,-2.6,0.16,1.99,1.09,0.01,">1 nonsynonymous","F17V K56S F126S T201L",4
"lib1","SARS-CoV-2","GTACTACCTCAAAACA",4,24.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y F8T F62G",3
"lib1","SARS-CoV-2","GTACTACGACGGGTCC",2,5.79,9.82,-0.94,0.18,2.74,1,0.01,"1 nonsynonymous","D34I",1
"lib1","SARS-CoV-2","GTACTACGGAAGACTA",5,88.39,9.69,-1.07,0.13,2.07,1.1,0.01,">1 nonsynonymous","Y39A K94G",2
"lib1","SARS-CoV-2","GTACTACTAACTCCCT",2,24.63,9.43,-1.34,0.16,2.01,1.13,0.01,">1 nonsynonymous","F17L N40Q",2
"lib1","SARS-CoV-2","GTACTACTAATGTACA",2,14.6,9.94,-0.83,0.06,2.93,1.02,0,">1 nonsynonymous","P7I K114W",2
"lib1","SARS-CoV-2","GTACTACTACAATAAG",1,9.25,10.76,-0.01,0.06,2.98,1,0,">1 nonsynonymous","L5S K56M T140V",3
"lib1","SARS-CoV-2","GTACTACTAGTAACGT",3,2.42,NA,NA,NA,NA,NA,NA,"stop","R27E F134* S184H",3
"lib1","SARS-CoV-2","GTACTACTCCACACGA",2,10.95,10.19,-0.58,0.18,2.64,1,0.01,">1 nonsynonymous","T3N E135R Y178H T201C",4
"lib1","SARS-CoV-2","GTACTACTTTCAGGGC",9,61.92,8.57,-2.19,0.23,1.5,1.11,0.02,">1 nonsynonymous","P82S I138N",2
"lib1","SARS-CoV-2","GTACTAGATATATTAA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","A42* E76T T148D F167H",4
"lib1","SARS-CoV-2","GTACTAGCACAGGACT",5,0.29,NA,NA,NA,NA,NA,NA,"stop","F8Q F134* Q168L",3
"lib1","SARS-CoV-2","GTACTAGCGAAGACAT",1,7.13,6,-4.76,2,3,1.17,0,">1 nonsynonymous","C49L L60D A81W N107V",4
"lib1","SARS-CoV-2","GTACTAGCGGTCTGAA",3,13.66,8.12,-2.64,0.23,1.71,1.19,0.03,">1 nonsynonymous","S45N F62Q R78L T193I",4
"lib1","SARS-CoV-2","GTACTAGCTTGGACAA",2,23.2,8.31,-2.46,0.3,1.5,1.09,0.03,">1 nonsynonymous","N64K G86S G116S",3
"lib1","SARS-CoV-2","GTACTAGGAGCCAAAA",5,17.46,7.5,-3.27,0.28,1.5,1.08,0.02,">1 nonsynonymous","D90W N107D G152N",3
"lib1","SARS-CoV-2","GTACTAGGCAAGAATC",2,18.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1L C61R G86T A105N Y119V",5
"lib1","SARS-CoV-2","GTACTAGTAACTCATT",4,27.43,10.66,-0.11,0.07,2.8,1.15,0,"1 nonsynonymous","I138A",1
"lib1","SARS-CoV-2","GTACTAGTACCAAAGA",2,1.35,NA,NA,NA,NA,NA,NA,"stop","W106* N109D N130D",3
"lib1","SARS-CoV-2","GTACTAGTTCTAGCGT",8,158.46,10.73,-0.03,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACTATACCCAGATG",1,45.28,10.78,0.01,0.06,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACTATCTGGAAGCG",6,16.79,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","T15A G51P G74C V115F",4
"lib1","SARS-CoV-2","GTACTATGTCTTAACT",5,93.18,10.52,-0.24,0.03,2.95,1.02,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","GTACTCAAAAGGAGTG",2,7.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N30S P96W",2
"lib1","SARS-CoV-2","GTACTCAAGCTCCCTA",4,20.12,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F99G S139W A145T",3
"lib1","SARS-CoV-2","GTACTCAATATGATAA",3,17.72,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G83R N92K L122A T148S V153R Q176P",6
"lib1","SARS-CoV-2","GTACTCACAACGGATG",4,52.3,6.38,-4.38,0.67,1.5,1.24,0.02,">1 nonsynonymous","F12W W23T",2
"lib1","SARS-CoV-2","GTACTCACGGTGTATC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F T201M",2
"lib1","SARS-CoV-2","GTACTCATACATTTCT",5,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76F R179I",2
"lib1","SARS-CoV-2","GTACTCATGTAAAAAG",7,21.73,8.71,-2.06,0.1,2.39,1.03,0,">1 nonsynonymous","Y39L P96G N107C L122K T170R",5
"lib1","SARS-CoV-2","GTACTCCAAGTAAATA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","A14Y Y159* A190T P197A",4
"lib1","SARS-CoV-2","GTACTCCAGTACTGAG",12,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L L122V Q144K F160V G166A",5
"lib1","SARS-CoV-2","GTACTCCATATTGAGA",7,32.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S P169N L183M",3
"lib1","SARS-CoV-2","GTACTCCATTCAAACA",7,98.94,6,-4.76,1.39,1.5,1.14,0.01,">1 nonsynonymous","G155V N157L",2
"lib1","SARS-CoV-2","GTACTCCCAAAACATT",3,82.54,6,-4.76,2,3,1.17,0,">1 nonsynonymous","V37H A81Q I88Q D137V",4
"lib1","SARS-CoV-2","GTACTCCTTCGTCCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y L60C V103S L183R",4
"lib1","SARS-CoV-2","GTACTCGTCCGTTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S P133S",2
"lib1","SARS-CoV-2","GTACTCTAGTACTAAT",6,158.79,10.52,-0.24,0.04,2.89,1.05,0,">1 nonsynonymous","A81Q K114T",2
"lib1","SARS-CoV-2","GTACTCTCAGGACAAA",1,11.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90Y Y121G L183A",3
"lib1","SARS-CoV-2","GTACTCTCCGGATGCC",1,5.75,9.31,-1.46,0.17,2.72,1.25,0.02,">1 nonsynonymous","D90W T140F",2
"lib1","SARS-CoV-2","GTACTCTGAGGTGATG",9,50.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","W106N E135S",2
"lib1","SARS-CoV-2","GTACTCTGCACCCCTG",10,130.23,10.42,-0.34,0.04,2.9,1.03,0,">1 nonsynonymous","F8L P169Y",2
"lib1","SARS-CoV-2","GTACTCTGTAGCAAAT",3,40.97,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","K56C G86V P96F",3
"lib1","SARS-CoV-2","GTACTCTTAGCATAGC",8,76.11,8.81,-1.96,0.15,2.18,1.1,0.01,">1 nonsynonymous","T46N D112E",2
"lib1","SARS-CoV-2","GTACTGAAAAGCCTGT",7,6.86,NA,NA,NA,NA,NA,NA,"stop","A14* K56W I142F F156D",4
"lib1","SARS-CoV-2","GTACTGAACTCAAAGT",1,69.32,10.35,-0.41,0.09,2.88,1.02,0,">1 nonsynonymous","D90E T148W",2
"lib1","SARS-CoV-2","GTACTGACAAAACAAG",8,123.69,10.71,-0.06,0.05,2.91,1.05,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","GTACTGACAGAAGAAA",4,14.78,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7W A81E G83V K114G Q163A P191L",6
"lib1","SARS-CoV-2","GTACTGACTGTTCTTA",5,36.39,6.46,-4.31,0.54,1.5,1.17,0.02,">1 nonsynonymous","F99G Y119V",2
"lib1","SARS-CoV-2","GTACTGAGGCGTGAAC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","F12S F167S Q176*",3
"lib1","SARS-CoV-2","GTACTGATATGTTCGT",7,96.19,8.82,-1.94,0.13,1.79,1.15,0.01,">1 nonsynonymous","R16G R179T H189D",3
"lib1","SARS-CoV-2","GTACTGATTAGCAGCA",5,113.16,9.29,-1.47,0.07,2.86,1.07,0,"1 nonsynonymous","Y119D",1
"lib1","SARS-CoV-2","GTACTGCAAGGTAGGT",14,182.06,10.85,0.09,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACTGCACAACTCAT",5,47.38,10.06,-0.7,0.1,2.19,1.06,0,">1 nonsynonymous","G51F A192D K198T",3
"lib1","SARS-CoV-2","GTACTGCCGTCGCGAG",1,0.54,NA,NA,NA,NA,NA,NA,"stop","G51C Q84* C158R F185L",4
"lib1","SARS-CoV-2","GTACTGCTGTTAAAAC",1,36.31,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F47A G74K I88T N109D",4
"lib1","SARS-CoV-2","GTACTGGCGAACGTAC",4,25.86,6.05,-4.71,1.46,1.5,1.24,0.04,">1 nonsynonymous","F17W G101N",2
"lib1","SARS-CoV-2","GTACTGGGCCTGGTTG",2,35.65,10.07,-0.69,0.12,2.48,1.09,0.01,"1 nonsynonymous","F70M",1
"lib1","SARS-CoV-2","GTACTGGGGTAAAAAA",7,8.39,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8L F12N E186F",3
"lib1","SARS-CoV-2","GTACTGGTCGTACAAT",6,46.91,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","T55M P82L Y93P K114W",4
"lib1","SARS-CoV-2","GTACTGTAACATAAGC",2,41.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N R25P G83T A89E",4
"lib1","SARS-CoV-2","GTACTGTAATATCCCG",7,107.2,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","N4L G51R L60P I72S",4
"lib1","SARS-CoV-2","GTACTGTCTAAATAGT",3,0.36,NA,NA,NA,NA,NA,NA,"stop","D90F S129I Q144* Q168A",4
"lib1","SARS-CoV-2","GTACTTAACAATAAGT",2,42.34,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D90G G117C Y159P",3
"lib1","SARS-CoV-2","GTACTTAAGTGTATCA",3,32.45,10.8,0.04,0.07,2.83,1.06,0,"1 nonsynonymous","P54T",1
"lib1","SARS-CoV-2","GTACTTAATATAGTGA",3,46.27,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","A14L Q84Y F167T",3
"lib1","SARS-CoV-2","GTACTTACACCAGTAA",2,46.52,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C49M P149F V173T",3
"lib1","SARS-CoV-2","GTACTTAGATGGCATC",6,64.39,10.01,-0.75,0.11,2.06,1,0,">1 nonsynonymous","Q84T W106R V115R",3
"lib1","SARS-CoV-2","GTACTTAGCTTCATCC",11,287.78,8.29,-2.47,0.13,2.02,1.13,0.01,">1 nonsynonymous","K132T Y143N",2
"lib1","SARS-CoV-2","GTACTTCACCTACATT",9,70.88,6.73,-4.04,0.35,1.5,1.12,0.02,">1 nonsynonymous","G9I P149H Q176R",3
"lib1","SARS-CoV-2","GTACTTCATTGCCAAA",1,3.35,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTACTTCTCTATTTCA",6,76.79,10.79,0.02,0.07,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTACTTCTGGCATGGG",2,16.98,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S43R K56M L95R W106P",4
"lib1","SARS-CoV-2","GTACTTCTTGGTCGTA",7,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y V103C P177G",3
"lib1","SARS-CoV-2","GTACTTGAACTAAGTA",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T F99H",2
"lib1","SARS-CoV-2","GTACTTGATCCCTATT",1,54.39,9.81,-0.96,0.05,2.29,1.05,0,">1 nonsynonymous","A89Y S129D",2
"lib1","SARS-CoV-2","GTACTTGGATGTGATA",6,55,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86T Y123N",2
"lib1","SARS-CoV-2","GTACTTGTAAGCTGTT",10,92.78,10.59,-0.17,0.07,2.93,1.05,0,">1 nonsynonymous","A14N D98N",2
"lib1","SARS-CoV-2","GTACTTTCAACAAACT",1,6.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R A42V F70L P96H S139Y",5
"lib1","SARS-CoV-2","GTACTTTCAACGATTA",2,23.55,10.21,-0.55,0.06,2,1.01,0,">1 nonsynonymous","S41A W106L",2
"lib1","SARS-CoV-2","GTACTTTCATCAGGCG",5,106.16,7.92,-2.84,0.22,1.59,1.16,0.02,">1 nonsynonymous","G146L G152S",2
"lib1","SARS-CoV-2","GTACTTTGAACAAATC",1,5.49,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","N13P K128L R136S",3
"lib1","SARS-CoV-2","GTACTTTGAAGAAAAA",2,35.36,6,-4.76,0.89,1.5,1.08,0.01,">1 nonsynonymous","F44T A105L N157E",3
"lib1","SARS-CoV-2","GTACTTTTTACAAAGC",2,23.71,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N64L P133M I142R",3
"lib1","SARS-CoV-2","GTAGAAAACATCAACA",2,14.63,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","N130M C150W V173S T201N",4
"lib1","SARS-CoV-2","GTAGAAAACGTTACAA",1,19.42,10.15,-0.61,0.07,2.92,1,0,">1 nonsynonymous","V37K G155W",2
"lib1","SARS-CoV-2","GTAGAAAATAATTCCT",3,24.25,8.75,-2.01,0.24,1.5,1.07,0.04,">1 nonsynonymous","D90T D112I",2
"lib1","SARS-CoV-2","GTAGAAAATCTTCATG",8,209.18,9.61,-1.16,0.04,2.77,1.1,0,">1 nonsynonymous","I2D G146R",2
"lib1","SARS-CoV-2","GTAGAAACAAAAACCT",1,18.91,6.2,-4.57,0.83,1.5,1.2,0.04,">1 nonsynonymous","N4G R16I K56A A105K",4
"lib1","SARS-CoV-2","GTAGAAACCCCGTGAA",1,86.06,9.92,-0.85,0.04,2.92,1.04,0,"1 nonsynonymous","F156G",1
"lib1","SARS-CoV-2","GTAGAAACTCTCTTGG",7,44.2,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D98C R127P F156V Y165W",4
"lib1","SARS-CoV-2","GTAGAAAGAACATGAT",10,3.22,NA,NA,NA,NA,NA,NA,"stop","N4T S43L C158* T201M",4
"lib1","SARS-CoV-2","GTAGAAAGTACTCGAT",4,18.63,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N30V Y35R R179V K199T",4
"lib1","SARS-CoV-2","GTAGAAATACCTGTTG",8,5.47,NA,NA,NA,NA,NA,NA,"stop","A18V S43L G51* Y91T D97W R127G Y159V",7
"lib1","SARS-CoV-2","GTAGAAATGGACCGAC",2,90.11,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V32T N64C D90G N107F Y119I P161R",6
"lib1","SARS-CoV-2","GTAGAACAGTACTTTA",8,113.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R N120V",2
"lib1","SARS-CoV-2","GTAGAACATACTTTGA",3,1.81,NA,NA,NA,NA,NA,NA,"stop","A22S G166P V181*",3
"lib1","SARS-CoV-2","GTAGAACCAATCGTAC",2,12.56,6.69,-4.08,0.84,1.5,1.25,0.08,">1 nonsynonymous","N1Q A33T A42S L162S",4
"lib1","SARS-CoV-2","GTAGAACTCTAAAACT",2,10.39,7.44,-3.32,0.48,1.5,1,0.07,">1 nonsynonymous","F70Y D90L W106S",3
"lib1","SARS-CoV-2","GTAGAAGAAACGCTAA",1,27.99,9.91,-0.86,0.12,2.79,1.06,0,">1 nonsynonymous","G155L N171H",2
"lib1","SARS-CoV-2","GTAGAAGAACAACTAC",2,123.56,10.29,-0.48,0.04,2.86,1,0,">1 nonsynonymous","A14V Y39T",2
"lib1","SARS-CoV-2","GTAGAAGAAGCTGTCT",4,17.46,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S19T F47K R136C",3
"lib1","SARS-CoV-2","GTAGAAGAAGGCTGGA",1,38.94,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5F Y21R F126L Q176S",4
"lib1","SARS-CoV-2","GTAGAAGGACCACTTC",2,117.07,10.86,0.1,0.08,2.9,1.04,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","GTAGAAGTAATTCCCA",6,48.13,6.85,-3.91,0.42,1.5,1.22,0.03,">1 nonsynonymous","Y93I E186D",2
"lib1","SARS-CoV-2","GTAGAATAAAGTATAA",9,2.17,NA,NA,NA,NA,NA,NA,"stop","Y50F Y175*",2
"lib1","SARS-CoV-2","GTAGAATAATCTCAAA",2,14.6,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y35S V103C N157V",3
"lib1","SARS-CoV-2","GTAGAATACCTACCCG",3,27.49,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y66S Y91C R179L",3
"lib1","SARS-CoV-2","GTAGAATACGACGGAG",5,78.03,6,-4.76,1.47,1.5,1.25,0.02,">1 nonsynonymous","L5K V37C K48S G83S K87N N107R Y123V S164R",8
"lib1","SARS-CoV-2","GTAGAATAGCCCTTAT",3,27.01,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19M C61R K94A P177S",4
"lib1","SARS-CoV-2","GTAGAATAGGTCAGCA",5,0.83,NA,NA,NA,NA,NA,NA,"stop","A89S I104*",2
"lib1","SARS-CoV-2","GTAGAATCCCCAACAA",3,45.96,9.82,-0.94,0.07,2.86,1,0,"1 nonsynonymous","G74K",1
"lib1","SARS-CoV-2","GTAGAATCTTTTATAA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R N107V R127V Q144F L183T",5
"lib1","SARS-CoV-2","GTAGAATTTGTAAAAA",4,89.66,8.98,-1.78,0.1,1.85,1.13,0,">1 nonsynonymous","Y39S Y91F G116F Y178S",4
"lib1","SARS-CoV-2","GTAGACAACGTACATT",3,74.42,10.71,-0.06,0.06,2.81,1.15,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","GTAGACAAGATCCAAA",5,102.81,10.45,-0.32,0.04,2.96,1,0,">1 nonsynonymous","N1L G174M",2
"lib1","SARS-CoV-2","GTAGACAGGATTCTAC",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95N D137S",2
"lib1","SARS-CoV-2","GTAGACAGTGACTAAA",1,7.03,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6V C61V F99C",3
"lib1","SARS-CoV-2","GTAGACCAATTCAATA",2,20.34,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","V52N K128S G152I V182A",4
"lib1","SARS-CoV-2","GTAGACCAGCAAATCC",2,13.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82C E154M A190C",3
"lib1","SARS-CoV-2","GTAGACCCCAGCCAAT",1,7.99,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","L5I Y93V L122F P133K",4
"lib1","SARS-CoV-2","GTAGACCGCAGTATAT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","N40S I80R N107* E141S",4
"lib1","SARS-CoV-2","GTAGACCGCCGGGAAA",1,41.86,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86S V103R H189S",3
"lib1","SARS-CoV-2","GTAGACCTTAACACCT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","C6L K56S Q84M K87* L122S V181A",6
"lib1","SARS-CoV-2","GTAGACCTTAGTTACG",3,29.71,10.59,-0.17,0.09,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGACGAAAATAAGG",4,67.71,6,-4.76,1.39,2.09,1.18,0.01,">1 nonsynonymous","R73T D90G F99K P149T Y178F",5
"lib1","SARS-CoV-2","GTAGACGCCGGCCAAT",2,53.28,9.93,-0.83,0.1,2.29,1.04,0,"1 nonsynonymous","V11S",1
"lib1","SARS-CoV-2","GTAGACGGGAAAGTAC",10,259.83,10.8,0.03,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGACGTATAAATCA",5,32.68,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S36V P54A N64Y C102L S113H A145C",6
"lib1","SARS-CoV-2","GTAGACTACTACTTCG",3,49.69,10.85,0.09,0.07,2.84,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAGACTCCATCGAAG",3,48.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C31N Y93H Q168A",3
"lib1","SARS-CoV-2","GTAGACTCGAATAAAG",2,68.27,8.1,-2.66,0.24,1.5,1.16,0.02,">1 nonsynonymous","S129C G155D Y165W",3
"lib1","SARS-CoV-2","GTAGACTTTGCAATTG",1,15.21,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N58M V65R Q176A",3
"lib1","SARS-CoV-2","GTAGAGAACGCTCAGG",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V Y119H",2
"lib1","SARS-CoV-2","GTAGAGAATGCAAAAG",7,0.25,NA,NA,NA,NA,NA,NA,"stop","F12C G83Y D90*",3
"lib1","SARS-CoV-2","GTAGAGACCCCTGAAC",4,93.05,10.69,-0.07,0.04,2.94,1.04,0,"1 nonsynonymous","F47W",1
"lib1","SARS-CoV-2","GTAGAGACGACTACTT",3,85.51,8.32,-2.45,0.15,2.92,1.08,0.01,"1 nonsynonymous","F126S",1
"lib1","SARS-CoV-2","GTAGAGCAAGGATGTA",5,158.5,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V20K Y119T T148D Q176S",4
"lib1","SARS-CoV-2","GTAGAGCCGATGAGTA",6,100.19,10.19,-0.58,0.1,2.5,1.01,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","GTAGAGCCGGGATTCC",9,108.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N64I A89S C158K",3
"lib1","SARS-CoV-2","GTAGAGCCGTACACGT",1,18.14,10.52,-0.25,0.06,2.91,1.02,0,">1 nonsynonymous","L5N S139C",2
"lib1","SARS-CoV-2","GTAGAGCTCAGGTTAC",6,35.61,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N4G G9R W23L R73L T85M D90Y K198V",7
"lib1","SARS-CoV-2","GTAGAGTAACATCACT",3,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M S29I K87E G146D",4
"lib1","SARS-CoV-2","GTAGAGTGTATATGCT",2,100.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F99I G172K",2
"lib1","SARS-CoV-2","GTAGAGTTAGGTACAG",3,14.01,7.22,-3.54,0.29,1.5,1.1,0.02,">1 nonsynonymous","N157P T170Y",2
"lib1","SARS-CoV-2","GTAGAGTTTTGTTATA",2,2.33,NA,NA,NA,NA,NA,NA,"stop","I80* Y119P E141R F156T T170K",5
"lib1","SARS-CoV-2","GTAGATAAAACAACCG",6,80.08,10.77,0.01,0.04,2.94,1.02,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","GTAGATAATCGACGTT",7,47.38,10.59,-0.17,0.02,2.95,1.02,0,">1 nonsynonymous","S129I G152D",2
"lib1","SARS-CoV-2","GTAGATACACTCGATG",8,76.7,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T15N C150W T201L",3
"lib1","SARS-CoV-2","GTAGATACTTTTTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3Y K87A W106* E141P L183I",5
"lib1","SARS-CoV-2","GTAGATAGATGAAAAG",1,7.37,8.61,-2.15,0.16,1.93,1.08,0.01,">1 nonsynonymous","V32R S41K L60G Y91I",4
"lib1","SARS-CoV-2","GTAGATAGCATATAGA",1,10.14,10.4,-0.37,0.3,1.7,1,0.03,">1 nonsynonymous","E76Y P149V",2
"lib1","SARS-CoV-2","GTAGATATCCTCTTTC",11,143.2,8.45,-2.32,0.17,2.08,1.13,0.01,">1 nonsynonymous","L95M P149Y Q168K",3
"lib1","SARS-CoV-2","GTAGATATTTGTCGTG",3,48.02,9.64,-1.13,0.06,2.91,1.03,0,"1 nonsynonymous","T170N",1
"lib1","SARS-CoV-2","GTAGATCACCTATTAA",2,50.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11F I28T N40R I104W P149S",5
"lib1","SARS-CoV-2","GTAGATCCAAAACTGC",3,35.79,10.32,-0.44,0.06,2.86,1.02,0,">1 nonsynonymous","E10L A42F",2
"lib1","SARS-CoV-2","GTAGATCCAATAACGT",8,33.42,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","S29T D98I G146V G174L F185N",5
"lib1","SARS-CoV-2","GTAGATCGTGGTAAGC",4,19.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y21R S41D Q84E G101Q",4
"lib1","SARS-CoV-2","GTAGATCTAGGAAATT",3,25.49,6,-4.76,1.66,3,1.04,0,">1 nonsynonymous","K87I A105P N157V",3
"lib1","SARS-CoV-2","GTAGATCTCGATGACT",6,42.01,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N13W R16L V37E Y66A T148Q",5
"lib1","SARS-CoV-2","GTAGATCTCGCTCGAA",12,2.87,NA,NA,NA,NA,NA,NA,"stop","A18V G74Q P96*",3
"lib1","SARS-CoV-2","GTAGATGAACCAATCG",4,60.37,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C49W F62H R78M Y91V K128L",5
"lib1","SARS-CoV-2","GTAGATGAAGTAGTCA",5,4.52,NA,NA,NA,NA,NA,NA,"stop","E10D S29* Y39L S41Y F44N",5
"lib1","SARS-CoV-2","GTAGATGACATGTCAC",1,11.51,9.01,-1.75,0.28,1.65,1.09,0.04,">1 nonsynonymous","N107R R127S S147E",3
"lib1","SARS-CoV-2","GTAGATGATACAGTAC",8,130.02,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5F G51D D98N A105T P177W",5
"lib1","SARS-CoV-2","GTAGATGCCTAACGAT",1,26.51,10.7,-0.07,0.12,2.89,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTAGATGGTATTAGCT",8,62.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9V T15L V37L A67S G117T",5
"lib1","SARS-CoV-2","GTAGATTCACCCAAAG",8,47.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F70R G83Y T201V",3
"lib1","SARS-CoV-2","GTAGATTCCATGACAC",6,78.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61N D68V N157L S164Y",4
"lib1","SARS-CoV-2","GTAGATTCTAGCCTAG",10,89.47,9.05,-1.72,0.15,1.65,1.16,0.01,">1 nonsynonymous","C102L P133G",2
"lib1","SARS-CoV-2","GTAGATTTAAGCTCAC",6,53.14,6.26,-4.5,0.72,1.5,1.19,0.02,">1 nonsynonymous","N24H K94V R136V",3
"lib1","SARS-CoV-2","GTAGATTTCTACTCGA",3,4.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6V",1
"lib1","SARS-CoV-2","GTAGATTTTCAATGTG",8,131.25,10.72,-0.04,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGCAAAACCTATGC",15,101.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38W F47Y D68G Y143K Q163R",5
"lib1","SARS-CoV-2","GTAGCAAACTGATTCC",5,28.69,6.51,-4.26,0.68,1.5,1.18,0.05,">1 nonsynonymous","G116S G146W N151I N171L",4
"lib1","SARS-CoV-2","GTAGCAAATCAGACAA",2,29.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y93K P177Q S200K",3
"lib1","SARS-CoV-2","GTAGCAAATCAGGTAA",6,114.24,10.62,-0.14,0.06,2.89,1.07,0,">1 nonsynonymous","I2V T55S Y123S V173L",4
"lib1","SARS-CoV-2","GTAGCAAATGATATAA",5,107.89,10.31,-0.45,0.02,2.96,1,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","GTAGCAACGAATACCC",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88S N109K",2
"lib1","SARS-CoV-2","GTAGCAACTACATTTG",1,0.68,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","GTAGCAACTTGTTTCA",5,126.51,6,-4.76,1.18,1.5,1.14,0.01,">1 nonsynonymous","L38P N157P",2
"lib1","SARS-CoV-2","GTAGCAAGTGCCTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C Q176L",2
"lib1","SARS-CoV-2","GTAGCAATGTTCCACT",8,117.87,10.82,0.05,0.09,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGCACAGACATACT",8,151.82,10.7,-0.07,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGCACCACAGAGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N13H R27E D68S K87* L95R",5
"lib1","SARS-CoV-2","GTAGCACCGATTATTG",5,8.27,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N58I D90F E141F S147N V181R",5
"lib1","SARS-CoV-2","GTAGCACCTCCACAAC",3,16.42,10.12,-0.65,0.11,2.16,1,0,"1 nonsynonymous","V182A",1
"lib1","SARS-CoV-2","GTAGCACTCGCAACTA",3,32.41,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","C6S V71R K114I",3
"lib1","SARS-CoV-2","GTAGCACTTTAGCAGG",1,46.94,10.64,-0.13,0.06,2.89,1.03,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","GTAGCAGAAGTTCAAA",5,45.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4I Q84K A105L Y123K K132I",5
"lib1","SARS-CoV-2","GTAGCAGACCTCATTT",5,152.72,10.19,-0.58,0.06,2.75,1.04,0,">1 nonsynonymous","L57V P149H",2
"lib1","SARS-CoV-2","GTAGCAGGACTTGGTA",14,201.48,8.11,-2.65,0.14,2.07,1.13,0.01,">1 nonsynonymous","G9W T46H T55Q S113D",4
"lib1","SARS-CoV-2","GTAGCATCCTTATGCT",3,29.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A89P F99D N107D I142V",4
"lib1","SARS-CoV-2","GTAGCATGATGGATAT",13,208.96,10.33,-0.44,0.03,2.96,1,0,"1 nonsynonymous","G174W",1
"lib1","SARS-CoV-2","GTAGCATGCTCTCACT",6,108.83,10.72,-0.04,0.05,2.91,1.03,0,">1 nonsynonymous","K56Q G116R",2
"lib1","SARS-CoV-2","GTAGCCACACTTATCT",1,32.51,10.32,-0.44,0.05,2.88,1.05,0,">1 nonsynonymous","N64F Y121L",2
"lib1","SARS-CoV-2","GTAGCCACCTATCAGG",1,9.41,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41G C49F I80H Y91L D98T S129L D137S C158N G174D",9
"lib1","SARS-CoV-2","GTAGCCACTGAATTGG",1,6.29,10.83,0.06,0.14,2.87,1.1,0.01,">1 nonsynonymous","F8W T46F",2
"lib1","SARS-CoV-2","GTAGCCAGCAACATCT",1,90.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I88Y V173T",2
"lib1","SARS-CoV-2","GTAGCCAGTGCCGTGG",3,98.76,9.34,-1.43,0.1,1.97,1.11,0,">1 nonsynonymous","V77K K87M",2
"lib1","SARS-CoV-2","GTAGCCATAAAGATGT",6,0.24,NA,NA,NA,NA,NA,NA,"stop","Y35* P54V E154Y G174E",4
"lib1","SARS-CoV-2","GTAGCCCGTGTGAAGT",3,40.24,8.32,-2.44,0.19,2,1.13,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","GTAGCCCTCAATGAAT",1,7.9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56I W106D D112K",3
"lib1","SARS-CoV-2","GTAGCCGATCTACCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94N N120C I138W Q144M T201L",5
"lib1","SARS-CoV-2","GTAGCCGTCTATTGTC",3,18.77,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S36K T63F A81S F99N S139G L187T",6
"lib1","SARS-CoV-2","GTAGCCTGAATGAGGG",4,26.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S53Y D59T V71A A81P",4
"lib1","SARS-CoV-2","GTAGCCTTGCAAAGAA",2,44.21,10.75,-0.01,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGCGACCTCAAAGT",5,39.66,10.56,-0.2,0.05,2.99,1.01,0,"1 nonsynonymous","I142Y",1
"lib1","SARS-CoV-2","GTAGCGACTACAAAAG",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E I88R N109P",3
"lib1","SARS-CoV-2","GTAGCGACTCTGCATT",3,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L I88G T148Q",3
"lib1","SARS-CoV-2","GTAGCGATATATATTT",5,45.74,6,-4.76,0.38,3,1.09,0,">1 nonsynonymous","S53C L95Y N120Y",3
"lib1","SARS-CoV-2","GTAGCGATTATTCATA",2,9.68,9.86,-0.9,0.17,2.13,1.02,0.01,">1 nonsynonymous","I104H I138K",2
"lib1","SARS-CoV-2","GTAGCGATTTATGTAC",2,1.76,NA,NA,NA,NA,NA,NA,"stop","R27T W106G R127*",3
"lib1","SARS-CoV-2","GTAGCGCATTCTCAAG",4,0.94,NA,NA,NA,NA,NA,NA,"stop","A81F D90R G117N S184*",4
"lib1","SARS-CoV-2","GTAGCGCCAACATGTA",3,91.83,7.34,-3.43,0.14,1.5,1.13,0.01,"1 nonsynonymous","C150Q",1
"lib1","SARS-CoV-2","GTAGCGGAAGACAAAA",6,101.41,10.01,-0.76,0.1,2.26,1.01,0,">1 nonsynonymous","N1V P96S N151F",3
"lib1","SARS-CoV-2","GTAGCGGACACACCGG",1,39.44,10.75,-0.02,0.07,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAGCGGAGAACTAGG",1,24.78,10.56,-0.2,0.09,2.85,1.13,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","GTAGCGGTTTTGGAGC",8,42.16,9,-1.77,0.23,1.64,1.11,0.03,">1 nonsynonymous","C6E D90L F185M",3
"lib1","SARS-CoV-2","GTAGCGTTTTCAACGC",1,3.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19P",1
"lib1","SARS-CoV-2","GTAGCTAAATGAAACT",5,115.45,9.66,-1.1,0.04,2.9,1.06,0,">1 nonsynonymous","L5N V32Y T170R",3
"lib1","SARS-CoV-2","GTAGCTAACCAAACTA",2,9.57,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","P54V V71E T100L D137L",4
"lib1","SARS-CoV-2","GTAGCTAATCTCATAG",1,12.66,6,-4.76,2,3,1.11,0,">1 nonsynonymous","E10T P54W D97N D137P Y178M",5
"lib1","SARS-CoV-2","GTAGCTACATCGAAAG",1,22.59,10.15,-0.61,0.1,2.41,1,0,">1 nonsynonymous","R136N Q163T",2
"lib1","SARS-CoV-2","GTAGCTACTACGGAGT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D F44P V52F N58P N120F",5
"lib1","SARS-CoV-2","GTAGCTAGAGAAATAA",7,94.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2G F70A I142F",3
"lib1","SARS-CoV-2","GTAGCTATATCAAAGA",1,10.87,10.25,-0.51,0.16,2.68,1.12,0.01,">1 nonsynonymous","P54Y D97G P191F",3
"lib1","SARS-CoV-2","GTAGCTCAAAATACAC",14,6.54,NA,NA,NA,NA,NA,NA,"stop","G51K D98Y F167*",3
"lib1","SARS-CoV-2","GTAGCTCAACCGCGAA",2,43.97,6,-4.76,1.38,1.5,1.15,0.01,">1 nonsynonymous","S29A Y91N A105L",3
"lib1","SARS-CoV-2","GTAGCTGAAGAAGATA",13,161.9,7.49,-3.27,0.23,1.5,1.13,0.02,">1 nonsynonymous","V11M F44N Y165M",3
"lib1","SARS-CoV-2","GTAGCTGCTGAAGCTG",4,60.39,9.66,-1.1,0.09,2.03,1.08,0,">1 nonsynonymous","G9V D59R N107P K132M",4
"lib1","SARS-CoV-2","GTAGCTTAAATTTCAT",1,104.13,10.71,-0.05,0.04,2.93,1.02,0,">1 nonsynonymous","T3W A42K R78H",3
"lib1","SARS-CoV-2","GTAGCTTTCTTCAGTT",4,41.65,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","I28P D112G Y119S E141T",4
"lib1","SARS-CoV-2","GTAGGAAAATCTATCT",8,159.79,9.94,-0.83,0.05,2.85,1.02,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","GTAGGAAAGCTTAACA",4,10.42,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","C6N A42K E76N Y91N Y123T",5
"lib1","SARS-CoV-2","GTAGGAACCGTTTAAC",4,124.93,10.76,-0.01,0.08,2.88,1.07,0,"1 nonsynonymous","N120A",1
"lib1","SARS-CoV-2","GTAGGACACCTCCTGT",2,25.82,10.38,-0.38,0.1,2.87,1.03,0.01,">1 nonsynonymous","Y123S K128L",2
"lib1","SARS-CoV-2","GTAGGACATAAACTGC",6,50.07,10.4,-0.36,0.06,2.89,1,0,">1 nonsynonymous","N58R K94R",2
"lib1","SARS-CoV-2","GTAGGACCCTGCAATA",6,1.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82V",1
"lib1","SARS-CoV-2","GTAGGACGAATCAGCA",1,45.64,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50L L95F Y175T",3
"lib1","SARS-CoV-2","GTAGGAGAAATGAACC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","P7* R127S",2
"lib1","SARS-CoV-2","GTAGGAGCCGCCCTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S F17T Y50T P54F F134G T201G",6
"lib1","SARS-CoV-2","GTAGGATACGCTAGGT",2,18.49,6.17,-4.59,0.67,1.5,1.37,0.02,">1 nonsynonymous","S29E F99S",2
"lib1","SARS-CoV-2","GTAGGATATGGAATTC",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S19M Y91N A105K P161S",5
"lib1","SARS-CoV-2","GTAGGATCGATCCCAG",2,8.82,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A105H L162A",2
"lib1","SARS-CoV-2","GTAGGCACAGGTTATA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","P82* L95R Q144F",3
"lib1","SARS-CoV-2","GTAGGCACATTGGGAA",5,66.26,10.42,-0.35,0.04,2.83,1.04,0,">1 nonsynonymous","G9V R27D",2
"lib1","SARS-CoV-2","GTAGGCACCAGAACAA",2,105.04,10.35,-0.42,0.07,2.87,1.01,0,">1 nonsynonymous","S41K K56V",2
"lib1","SARS-CoV-2","GTAGGCACCATCTAAA",1,1.31,NA,NA,NA,NA,NA,NA,"stop","A105* K128Y P149V",3
"lib1","SARS-CoV-2","GTAGGCATACTAACTT",2,42.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N40Y N58K V77T P96R N107L",5
"lib1","SARS-CoV-2","GTAGGCATGAGAAGTG",2,33.76,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","R25L N40K T55N A89V P96H",5
"lib1","SARS-CoV-2","GTAGGCGGACGCAAAA",2,96.9,9.59,-1.18,0.05,2.87,1.08,0,"1 nonsynonymous","Y143I",1
"lib1","SARS-CoV-2","GTAGGCGTCTGGAGAA",3,31.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R27L L60K A81K D98I F167C",5
"lib1","SARS-CoV-2","GTAGGCTAGGCGTAAT",4,2.51,NA,NA,NA,NA,NA,NA,"stop","Y50V Y91*",2
"lib1","SARS-CoV-2","GTAGGCTATTAACGCT",3,63.26,10.76,0,0.05,2.93,1.04,0,">1 nonsynonymous","F8L Y91F",2
"lib1","SARS-CoV-2","GTAGGCTGTAAGAAGT",5,124.68,6,-4.76,2,1.76,1.17,0.01,">1 nonsynonymous","S36L K56R P177F",3
"lib1","SARS-CoV-2","GTAGGGAACCCGTACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N Y66K D137I",3
"lib1","SARS-CoV-2","GTAGGGAATGCGTTTA",4,44.49,9.76,-1,0.11,1.91,1.09,0.01,">1 nonsynonymous","W106V A145G",2
"lib1","SARS-CoV-2","GTAGGGTCAAGCGGAC",2,83.16,9.79,-0.97,0.1,2.56,1.09,0,">1 nonsynonymous","G83T A89P",2
"lib1","SARS-CoV-2","GTAGGGTCGACCGCGG",2,43.59,10.71,-0.05,0.08,2.95,1.03,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","GTAGGTAAACAGCGAT",2,18.29,6.21,-4.55,0.72,1.5,1.19,0.03,">1 nonsynonymous","R16L A22I G83I D98H",4
"lib1","SARS-CoV-2","GTAGGTCAGTCAACAC",5,102.32,6.73,-4.03,0.38,1.5,1.2,0.02,">1 nonsynonymous","I28G L57H",2
"lib1","SARS-CoV-2","GTAGGTCCAGAACGCC",4,1.28,NA,NA,NA,NA,NA,NA,"stop","G51* V71L W106V I138*",4
"lib1","SARS-CoV-2","GTAGGTCTAGATATCT",3,100.18,10.78,0.02,0.07,2.84,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","GTAGGTTTTTTTTCGT",7,30.56,6.22,-4.54,0.85,1.5,1.19,0.03,">1 nonsynonymous","Y91N A105N",2
"lib1","SARS-CoV-2","GTAGTAAAAGTTGACG",7,65.77,9.89,-0.87,0.12,2.13,1.05,0,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","GTAGTAAACTAACAGG",3,54.39,10.34,-0.43,0.04,2.95,1.02,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","GTAGTAAAGAACAAAC",6,58.39,10.67,-0.09,0.05,2.89,1.09,0,"1 nonsynonymous","L5Y",1
"lib1","SARS-CoV-2","GTAGTAACGTACACTA",1,21.73,6,-4.76,2,3,1.24,0.04,">1 nonsynonymous","A81K L95T G146C",3
"lib1","SARS-CoV-2","GTAGTAAGACCCGAGT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","P54L L122* T201Y",3
"lib1","SARS-CoV-2","GTAGTAATAAAAACGA",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q C49L A81T Y123G K199W",5
"lib1","SARS-CoV-2","GTAGTAATCGCATGTT",2,84.46,10.28,-0.48,0.04,2.9,1.03,0,">1 nonsynonymous","R27L T148P A190S S200L",4
"lib1","SARS-CoV-2","GTAGTAATTTCCCGCG",1,5.73,10.59,-0.17,0.15,2.88,1.05,0.01,"1 nonsynonymous","D59V",1
"lib1","SARS-CoV-2","GTAGTACAAGCACGAT",5,69.34,8.32,-2.44,0.1,2.84,1.1,0.01,">1 nonsynonymous","F126S L187Q",2
"lib1","SARS-CoV-2","GTAGTACATATACAGG",2,27.83,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","F44C D112Q",2
"lib1","SARS-CoV-2","GTAGTACCCCAATGTG",4,25.83,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","N64T N92K V103L K128F E135L",5
"lib1","SARS-CoV-2","GTAGTACGAAATTCTG",2,10.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97I D112V N130M Y175C F185Q",5
"lib1","SARS-CoV-2","GTAGTACGAATCAGAA",2,8.85,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","N1P D34C D98Y P133L",4
"lib1","SARS-CoV-2","GTAGTACTGATAGAAA",16,12.19,9.62,-1.14,0.32,2.1,1.01,0.06,">1 nonsynonymous","F12S P161A",2
"lib1","SARS-CoV-2","GTAGTACTGGAACAAC",7,61.27,10.22,-0.55,0.09,2.82,1.14,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","GTAGTAGAACATGGAA",8,124.11,10.17,-0.6,0.05,2.94,1,0,">1 nonsynonymous","G9R F156L",2
"lib1","SARS-CoV-2","GTAGTAGATTATGATT",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R L60Y P96S N107H P177S",5
"lib1","SARS-CoV-2","GTAGTAGTAGAAACAC",4,73.6,10.87,0.11,0.06,2.99,1,0,">1 nonsynonymous","I28F S43K N110F",3
"lib1","SARS-CoV-2","GTAGTAGTATATCTAT",1,10.87,10.75,-0.02,0.11,2.93,1,0,">1 nonsynonymous","S29T G116T",2
"lib1","SARS-CoV-2","GTAGTAGTATCGCAGT",3,28.41,10.2,-0.56,0.12,2.66,1.08,0.01,">1 nonsynonymous","A18E Y39M K56G N64H N120F",5
"lib1","SARS-CoV-2","GTAGTATGGTAATTAC",1,10.6,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","V37Y F62V L95T V181L V182Y",5
"lib1","SARS-CoV-2","GTAGTATGTTCAATTA",2,8.42,9.81,-0.95,0.18,2,1,0.01,">1 nonsynonymous","N64T P82T N171Y G174S",4
"lib1","SARS-CoV-2","GTAGTATTGACGGGAA",5,0.88,NA,NA,NA,NA,NA,NA,"stop","E10W F62P G146Y Q163*",4
"lib1","SARS-CoV-2","GTAGTATTTTCGCTGG",1,64.52,10.77,0.01,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGTCAGACCGATCC",3,147.1,10.71,-0.05,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGTCAGACTGTACA",6,100.67,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P7S I88L N107R G152D S200F",5
"lib1","SARS-CoV-2","GTAGTCAGAGCAGGAC",8,82.18,8.19,-2.57,0.24,1.5,1.12,0.02,">1 nonsynonymous","G9L N107V N110V A192E P197W",5
"lib1","SARS-CoV-2","GTAGTCATAACAAGCT",3,0.37,NA,NA,NA,NA,NA,NA,"stop","Y91G Y165*",2
"lib1","SARS-CoV-2","GTAGTCATATTATCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39S T85* T100L Y143S S164K A192T",6
"lib1","SARS-CoV-2","GTAGTCATGCCGACCT",1,24.37,10.19,-0.58,0.13,2.74,1,0.01,">1 nonsynonymous","A14S S45R",2
"lib1","SARS-CoV-2","GTAGTCCCTACTGGTG",1,73.46,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","N1D D90T N107P Y121R P177T",5
"lib1","SARS-CoV-2","GTAGTCCTGGGGAGGG",6,74.63,10.72,-0.04,0.08,2.91,1.06,0,"1 nonsynonymous","P54E",1
"lib1","SARS-CoV-2","GTAGTCGAACAAAATG",2,59.71,10.95,0.19,0.09,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGTCGCAACCCACG",1,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54K D98Y V103S F160S",4
"lib1","SARS-CoV-2","GTAGTCGTGGAAGCAA",11,59.53,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","K87S Y143S G155S",3
"lib1","SARS-CoV-2","GTAGTCGTTGTACCGT",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H F70T P96S T100L Y119R",5
"lib1","SARS-CoV-2","GTAGTGAAAACTTGTT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K N107G K128S P149K",4
"lib1","SARS-CoV-2","GTAGTGAACATACTAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","GTAGTGAATGTAAAAG",4,60.86,10.61,-0.15,0.07,2.89,1.03,0,">1 nonsynonymous","L187P K198N",2
"lib1","SARS-CoV-2","GTAGTGACATCATAGT",5,13.28,6,-4.76,2,1.5,1.27,0.03,"1 nonsynonymous","G101D",1
"lib1","SARS-CoV-2","GTAGTGACTCAATCCG",5,47.2,7.07,-3.69,0.32,1.78,1.2,0.03,">1 nonsynonymous","V37D G83V F126G",3
"lib1","SARS-CoV-2","GTAGTGAGACAAAACC",3,31.42,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","R16V K48I D68A F134N",4
"lib1","SARS-CoV-2","GTAGTGAGCGCGTAAC",7,0.41,NA,NA,NA,NA,NA,NA,"stop","A81* D112R Y119F",3
"lib1","SARS-CoV-2","GTAGTGTCATACTTCC",4,32.09,9.79,-0.98,0.1,2.35,1.08,0,">1 nonsynonymous","T100N P149W E154M",3
"lib1","SARS-CoV-2","GTAGTTAAAGCCGACT",4,55.94,10.61,-0.15,0.07,2.92,1,0,"1 nonsynonymous","Y123C",1
"lib1","SARS-CoV-2","GTAGTTACGCATTATA",2,2.29,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","GTAGTTAGACACTCCG",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L F99S V153A",3
"lib1","SARS-CoV-2","GTAGTTAGTCGAATTG",4,58.39,10.71,-0.06,0.07,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTAGTTAGTTCATAGC",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G K128E E135R T170F",4
"lib1","SARS-CoV-2","GTAGTTCATAAACCCG",12,47.7,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V37I L60R G83I D112K",4
"lib1","SARS-CoV-2","GTAGTTCATTAAACCA",4,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R C61S C158Q",3
"lib1","SARS-CoV-2","GTAGTTCCAAAAGCAA",2,2.2,NA,NA,NA,NA,NA,NA,"stop","W23* V153C",2
"lib1","SARS-CoV-2","GTAGTTCCAAGGCAAA",2,23.08,6,-4.76,1.3,1.5,1.09,0.01,">1 nonsynonymous","V37W T63C P82M D98R A105I S139R Y159I Q176I",8
"lib1","SARS-CoV-2","GTAGTTCCTTTTTCAA",1,62.38,10.25,-0.51,0.03,2.84,1.04,0,">1 nonsynonymous","K56M C61G V115Y",3
"lib1","SARS-CoV-2","GTAGTTCTCTAACCGC",3,2.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68R",1
"lib1","SARS-CoV-2","GTAGTTCTTGCATCAG",11,281.76,9.32,-1.45,0.06,2.86,1.07,0,">1 nonsynonymous","N120G N157S",2
"lib1","SARS-CoV-2","GTAGTTGTCAATTACG",4,26.35,6,-4.76,2,3,1.24,0,">1 nonsynonymous","W106K V181G",2
"lib1","SARS-CoV-2","GTAGTTGTCTTTATAG",4,107.01,8.61,-2.16,0.12,2.83,1.11,0.01,">1 nonsynonymous","S45T G166D",2
"lib1","SARS-CoV-2","GTAGTTGTGGACATAA",4,123.73,6,-4.76,1.27,1.5,1.18,0.01,">1 nonsynonymous","Q163H P177R",2
"lib1","SARS-CoV-2","GTAGTTTAAGGCGCAT",1,1.49,NA,NA,NA,NA,NA,NA,"stop","C6M R16I F62T Q84* I88T Y123D",6
"lib1","SARS-CoV-2","GTAGTTTAGAAATCAG",9,133.86,7.78,-2.98,0.11,1.9,1.15,0,">1 nonsynonymous","D97N Y143D",2
"lib1","SARS-CoV-2","GTAGTTTGCAAAAAAT",1,42.74,10.18,-0.58,0.08,2.82,1.02,0,"1 nonsynonymous","Y123T",1
"lib1","SARS-CoV-2","GTAGTTTGCGGCACGG",3,33.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65N G83V",2
"lib1","SARS-CoV-2","GTAGTTTTATATCACT",10,88.61,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72F A81V T85R K87M F167S",5
"lib1","SARS-CoV-2","GTATAAAAAATAGAAA",2,0.37,NA,NA,NA,NA,NA,NA,"stop","Y35S Y159*",2
"lib1","SARS-CoV-2","GTATAAAAATAGTCCT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","S36* K87L G174R",3
"lib1","SARS-CoV-2","GTATAAAACCTTATAT",5,167.41,10.37,-0.4,0.03,2.86,1.05,0,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","GTATAAAAGAAAACAT",7,47.74,6.1,-4.66,0.77,1.5,1.17,0.02,">1 nonsynonymous","F44S R78L N107R Y123W",4
"lib1","SARS-CoV-2","GTATAAAAGCAAAGAA",1,30.31,9.84,-0.93,0.16,2.05,1.09,0.01,">1 nonsynonymous","L5R S41R N58L A105T",4
"lib1","SARS-CoV-2","GTATAAAAGTTAGAAG",1,19.15,6,-4.76,2,1.5,1.12,0.07,">1 nonsynonymous","V20Q S113G S164I",3
"lib1","SARS-CoV-2","GTATAAAATATTTAAT",1,47.88,10.82,0.05,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAAAATGCCCCAA",2,11.24,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5K A105M R124A",3
"lib1","SARS-CoV-2","GTATAAAATGCGGATG",2,20.87,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S36M C102P S108V",3
"lib1","SARS-CoV-2","GTATAAACAAAAAATT",2,16.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6W V37E S41H C61H N92D D98L",6
"lib1","SARS-CoV-2","GTATAAACAAAACAAT",3,0.31,NA,NA,NA,NA,NA,NA,"stop","G83Y D98* G116H E141I",4
"lib1","SARS-CoV-2","GTATAAACACAGACAC",4,8.04,10.01,-0.76,0.15,2.12,1,0.01,">1 nonsynonymous","N4S N13V",2
"lib1","SARS-CoV-2","GTATAAACTCCTAAGT",2,27.68,7.8,-2.96,0.36,1.5,1,0.04,">1 nonsynonymous","V77I G86Q K114S P149S",4
"lib1","SARS-CoV-2","GTATAAACTGCCCTCC",4,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F D34V G155V",3
"lib1","SARS-CoV-2","GTATAAAGCCCAAAAA",5,79.03,9.3,-1.46,0.17,1.76,1.17,0.01,">1 nonsynonymous","S43M K56L L162N",3
"lib1","SARS-CoV-2","GTATAAAGTATTCAAG",7,59.2,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F62N D112T Y165L",3
"lib1","SARS-CoV-2","GTATAAAGTGCTGACA",11,127.79,10.18,-0.58,0.05,2.78,1.02,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","GTATAAATACGAACCA",1,4.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","GTATAAATATGATTAC",1,28.5,10.77,0,0.09,3,1,0,">1 nonsynonymous","V37S R73K",2
"lib1","SARS-CoV-2","GTATAAATGAGTCCAA",1,15.41,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","D98Y F167K",2
"lib1","SARS-CoV-2","GTATAAATGCCAGGTC",15,141.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S19E E141G N157A",3
"lib1","SARS-CoV-2","GTATAAATGTACGTAG",4,27.03,8.4,-2.36,0.23,1.5,1.12,0.02,">1 nonsynonymous","G9F N64L F99L",3
"lib1","SARS-CoV-2","GTATAAATTTATTAAC",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E N92K T201F",3
"lib1","SARS-CoV-2","GTATAACAAGTTTCAT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","S41E T85* T201*",3
"lib1","SARS-CoV-2","GTATAACAATATCTTA",2,64.89,10.3,-0.47,0.05,2.82,1.07,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","GTATAACAATTCCTCC",1,23.53,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y21L S45R T63L G146C S184H",5
"lib1","SARS-CoV-2","GTATAACAGCGGTTAT",1,19.79,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I80P F99H Q176F H189Y",4
"lib1","SARS-CoV-2","GTATAACAGTTAACGG",4,36.42,9.07,-1.69,0.08,2.72,1.13,0,">1 nonsynonymous","Y119A N151I",2
"lib1","SARS-CoV-2","GTATAACATCACGCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib1","SARS-CoV-2","GTATAACCAGGATAAA",1,10.83,9.64,-1.12,0.17,1.85,1.13,0.01,">1 nonsynonymous","R27G F62R",2
"lib1","SARS-CoV-2","GTATAACGAACATCGA",5,8.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56W R78W G83V G116Q P149Y",5
"lib1","SARS-CoV-2","GTATAACGAGGTTACA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","V11N P82* P133R",3
"lib1","SARS-CoV-2","GTATAACGCATGCTGC",1,0.75,NA,NA,NA,NA,NA,NA,"stop","E10* N58S G83H N109L K128T Q144S G174I",7
"lib1","SARS-CoV-2","GTATAACGCGCCTCTT",7,172.72,8.84,-1.92,0.07,2.63,1.07,0,">1 nonsynonymous","A42S D97R T148V Q168I",4
"lib1","SARS-CoV-2","GTATAACGCTATATGG",3,156.63,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T55L K87S Q144F Y178L",4
"lib1","SARS-CoV-2","GTATAACGGCTGCTAC",2,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T F17P N120L",3
"lib1","SARS-CoV-2","GTATAACTACAGTTCA",1,15.73,10.29,-0.47,0.09,2.98,1,0,">1 nonsynonymous","E141D E154P F185L",3
"lib1","SARS-CoV-2","GTATAACTAGCTAATC",16,234.78,10.11,-0.66,0.03,2.92,1.01,0,">1 nonsynonymous","S53L F156K",2
"lib1","SARS-CoV-2","GTATAACTCAGATTAT",6,77.44,10.2,-0.56,0.08,2.76,1.09,0,"1 nonsynonymous","E141T",1
"lib1","SARS-CoV-2","GTATAACTCATCTATC",12,58.17,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G9V I104M A105D",3
"lib1","SARS-CoV-2","GTATAACTCCACCTAG",2,32.52,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4L F99E P177Y",3
"lib1","SARS-CoV-2","GTATAACTTGTCACCC",3,113.5,8.8,-1.96,0.09,2.6,1.14,0,">1 nonsynonymous","L60R S164I G174K",3
"lib1","SARS-CoV-2","GTATAAGACGCTGCCG",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38V V173L",2
"lib1","SARS-CoV-2","GTATAAGACGTATTTT",4,60.67,10.2,-0.56,0.08,2.6,1.06,0,">1 nonsynonymous","A14G S139R",2
"lib1","SARS-CoV-2","GTATAAGAGAAAGTCA",2,2.31,NA,NA,NA,NA,NA,NA,"stop","D98* Q168M",2
"lib1","SARS-CoV-2","GTATAAGAGGTGAATA",4,28.71,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R16I G83V Y93C S113L V153I",5
"lib1","SARS-CoV-2","GTATAAGCCCATGGGT",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P T148E",2
"lib1","SARS-CoV-2","GTATAAGCCTTAGACT",5,66.89,10.61,-0.16,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAAGGATATAAGT",9,44.98,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F8E N157T",2
"lib1","SARS-CoV-2","GTATAAGGGAATGACT",3,51.64,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3C I72T G146E",3
"lib1","SARS-CoV-2","GTATAAGTACTAGCAT",1,5.56,10.89,0.12,0.15,2.78,1.2,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAAGTATCATGAC",3,29.74,9.91,-0.85,0.09,2.88,1.05,0,">1 nonsynonymous","N110M N118T",2
"lib1","SARS-CoV-2","GTATAAGTGATGATAT",3,31.05,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","Y123G P161F",2
"lib1","SARS-CoV-2","GTATAAGTGTTGACAG",3,19.23,6.58,-4.18,0.8,1.5,1.2,0.06,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","GTATAAGTTAGGTTTA",1,36.78,10.46,-0.31,0.09,2.75,1.03,0,">1 nonsynonymous","G9E T63H D98V",3
"lib1","SARS-CoV-2","GTATAAGTTAGTGACG",6,37.62,6.24,-4.52,0.41,1.68,1.13,0.01,">1 nonsynonymous","I142R F156H T170L Q176R",4
"lib1","SARS-CoV-2","GTATAATAACCTTTTG",1,12.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I88N V103F T170S Y178N",4
"lib1","SARS-CoV-2","GTATAATACAGCGGGG",1,8.05,9.92,-0.85,0.26,2.08,1.19,0.03,">1 nonsynonymous","N64F I138Y P149F",3
"lib1","SARS-CoV-2","GTATAATACTATAACC",4,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M A42N T55M F99P N151L C158L K199R",7
"lib1","SARS-CoV-2","GTATAATACTCCCGCG",2,45.03,10.83,0.06,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAATAGTGCCAAC",2,18.29,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V37Y G101E T170Q",3
"lib1","SARS-CoV-2","GTATAATATGGATTTT",2,36.72,6.26,-4.5,0.66,1.5,1.17,0.02,">1 nonsynonymous","N13I D90I A192E",3
"lib1","SARS-CoV-2","GTATAATATGGTATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L95* I138D I142G C158I",4
"lib1","SARS-CoV-2","GTATAATATTGGGCAG",5,27.46,9.12,-1.65,0.37,1.5,1,0.07,">1 nonsynonymous","Y50L D90R",2
"lib1","SARS-CoV-2","GTATAATCACTCAGAT",4,63.24,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","Y121M Y143D",2
"lib1","SARS-CoV-2","GTATAATGATAATTTT",5,0.12,NA,NA,NA,NA,NA,NA,"stop","C6S T55* V103F",3
"lib1","SARS-CoV-2","GTATAATGTAAGCATT",1,19.74,6.13,-4.63,1.24,1.5,1.1,0.05,">1 nonsynonymous","N118P D137N I138M",3
"lib1","SARS-CoV-2","GTATAATGTGAGCTAC",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45E N58R F167W",3
"lib1","SARS-CoV-2","GTATAATGTTACGTTA",3,4568.22,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y21G N40K N58A T140Q Y159W S184N",6
"lib1","SARS-CoV-2","GTATAATTAATGCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F D34I D59E D90L C150V G166L",6
"lib1","SARS-CoV-2","GTATAATTATCTAAGT",12,3.12,NA,NA,NA,NA,NA,NA,"stop","I2R T15K N118S L162*",4
"lib1","SARS-CoV-2","GTATAATTCATAGAGA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","N1G S45I A81* F99G",4
"lib1","SARS-CoV-2","GTATAATTGACATAAC",3,17.86,6,-4.76,0.3,3,1.03,0,">1 nonsynonymous","F99I F185L",2
"lib1","SARS-CoV-2","GTATAATTGGAAAATG",8,31.63,7.2,-3.56,0.36,1.5,1.26,0.04,">1 nonsynonymous","T55F F99L V115L K128L",4
"lib1","SARS-CoV-2","GTATAATTTTTCATTA",3,40.92,10.85,0.08,0.06,2.94,1.01,0,">1 nonsynonymous","T3D P149S",2
"lib1","SARS-CoV-2","GTATACAAAAAGTTAG",2,39.94,10.27,-0.5,0.09,2.77,1,0,">1 nonsynonymous","E10I T15L H189N",3
"lib1","SARS-CoV-2","GTATACACCGATGAAA",3,35.75,6.49,-4.27,0.69,1.5,1.14,0.06,">1 nonsynonymous","W23S Q84E K114I R127W V173L",5
"lib1","SARS-CoV-2","GTATACAGTTTAAGTC",21,179.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3R D68Q",2
"lib1","SARS-CoV-2","GTATACATAATTGATG",5,59.26,10.11,-0.65,0.1,2.35,1.02,0,">1 nonsynonymous","V32M F62R L95V",3
"lib1","SARS-CoV-2","GTATACATATGAATAT",2,84.43,9.07,-1.69,0.12,2.65,1.16,0.01,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","GTATACATCAACACGA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","S29* W106A F126W G146V G155F T170L",6
"lib1","SARS-CoV-2","GTATACATGAATTAAA",6,144.96,10.26,-0.5,0.04,2.83,1.05,0,">1 nonsynonymous","T3G I28F W106V",3
"lib1","SARS-CoV-2","GTATACATGCAAATAA",3,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18I V65Q I72C G86A C102N",5
"lib1","SARS-CoV-2","GTATACATTGCCTACA",8,36.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L95F F156N G166Q V173P",4
"lib1","SARS-CoV-2","GTATACCAAGAATATG",2,35.85,9.84,-0.92,0.18,1.97,1.07,0.02,"1 nonsynonymous","D68Y",1
"lib1","SARS-CoV-2","GTATACCACAAGATTG",2,47.07,8.41,-2.35,0.16,2.75,1.04,0.01,">1 nonsynonymous","S53L T148A T170I",3
"lib1","SARS-CoV-2","GTATACCATTTTCTGC",12,178.05,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R78W Q84Y N157R",3
"lib1","SARS-CoV-2","GTATACCCATCACCCG",1,41.57,8.66,-2.1,0.09,1.61,1.14,0,">1 nonsynonymous","F17G F44T",2
"lib1","SARS-CoV-2","GTATACCCGCCGTACT",4,47.48,10.05,-0.71,0.08,2.16,1,0,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","GTATACCGGCATTTGT",7,181.02,10.69,-0.08,0.03,2.93,1.02,0,">1 nonsynonymous","L5S A42G",2
"lib1","SARS-CoV-2","GTATACCTTAGAAGCG",1,46.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89E R136H",2
"lib1","SARS-CoV-2","GTATACGAAACGCTAT",7,58.77,8.83,-1.94,0.13,1.64,1.11,0.01,">1 nonsynonymous","G116S F185S",2
"lib1","SARS-CoV-2","GTATACGAACTCAGAT",7,35.54,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A18T L95N F99S",3
"lib1","SARS-CoV-2","GTATACGATGACAATT",10,240.43,10.37,-0.39,0.03,2.9,1.02,0,">1 nonsynonymous","C61P T85R N107C C195K",4
"lib1","SARS-CoV-2","GTATACGATGTTTAAC",9,77.81,6.71,-4.06,0.5,1.5,1.26,0.03,">1 nonsynonymous","C6R V11Y V77M S139D",4
"lib1","SARS-CoV-2","GTATACGCCATTGCAC",1,68.53,10.08,-0.69,0.08,2.66,1.05,0,">1 nonsynonymous","D98T Y123C",2
"lib1","SARS-CoV-2","GTATACGCGTTCACCT",2,27.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12V N30V V65R D90K N107G F156L T201M",7
"lib1","SARS-CoV-2","GTATACGCTAAGACTT",11,16.76,6,-4.76,1.08,1.5,1.11,0.01,">1 nonsynonymous","V103Q Q168P",2
"lib1","SARS-CoV-2","GTATACGTAAACTATT",6,25.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E76P T148D",2
"lib1","SARS-CoV-2","GTATACGTAATTTCAT",5,119.25,10.78,0.02,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATACGTCTGACCTT",11,1.79,NA,NA,NA,NA,NA,NA,"stop","T3* R127Y",2
"lib1","SARS-CoV-2","GTATACTACAGGGTAG",3,48.43,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D68K D90R",2
"lib1","SARS-CoV-2","GTATACTATATTCGTC",1,11.84,6,-4.76,2,3,1.09,0,">1 nonsynonymous","P7L T55F D68W K128C",4
"lib1","SARS-CoV-2","GTATACTATCGATTAA",1,2.7,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","GTATACTATTAAAAGA",2,58.19,9.01,-1.75,0.11,2.23,1.11,0.01,">1 nonsynonymous","V37G D112L",2
"lib1","SARS-CoV-2","GTATACTTCACCTTTA",5,103.61,10.56,-0.21,0.06,2.9,1.03,0,">1 nonsynonymous","F160K N171C",2
"lib1","SARS-CoV-2","GTATACTTGCACCTAG",11,96.27,6,-4.76,2,3,1.16,0,"1 nonsynonymous","R124H",1
"lib1","SARS-CoV-2","GTATAGACTCAATACA",9,119.19,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","W106S N120V L125P P149W",4
"lib1","SARS-CoV-2","GTATAGAGAAGCCAAC",2,26.73,10.75,-0.01,0.1,2.77,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAGAGCGCAATAC",4,71.99,10.62,-0.14,0.08,2.76,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAGAGGACCCTTC",2,49.47,10.68,-0.08,0.06,2.89,1.05,0,"1 nonsynonymous","Y39P",1
"lib1","SARS-CoV-2","GTATAGAGGCCTGCAC",5,34.98,10.65,-0.12,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATAGATTCGTAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","GTATAGCAGCTTTATA",1,18.93,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","L57S T63S T100Y W106C K128Q",5
"lib1","SARS-CoV-2","GTATAGCATTATAAAA",3,26.25,10.71,-0.06,0.07,3,1.02,0,">1 nonsynonymous","T55V C61V",2
"lib1","SARS-CoV-2","GTATAGGATAAAACGG",1,23.41,9.42,-1.34,0.12,2.64,1.07,0.01,">1 nonsynonymous","C6S E154H",2
"lib1","SARS-CoV-2","GTATAGGATGACTTGA",4,39.29,6.92,-3.84,0.3,1.5,1.07,0.02,">1 nonsynonymous","A22R I72M D97R E135S",4
"lib1","SARS-CoV-2","GTATAGTAGAGAAAAA",7,1.1,NA,NA,NA,NA,NA,NA,"stop","E10K S41E D59V D98H V103G T201*",6
"lib1","SARS-CoV-2","GTATAGTTAAAAGGTC",7,73.34,9.96,-0.8,0.08,2.23,1.06,0,">1 nonsynonymous","N1F G9S N64L P149F",4
"lib1","SARS-CoV-2","GTATAGTTAACGCCCT",13,54.23,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K48N P54R A81T I104R",4
"lib1","SARS-CoV-2","GTATAGTTCACGCGGG",3,7.55,10.78,0.01,0.14,2.99,1.01,0.01,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","GTATAGTTGCAATATA",8,102.49,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D59W T100D P161N",3
"lib1","SARS-CoV-2","GTATATAAAATGTGCG",6,262.36,10.82,0.05,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATATAAAATTTTGG",2,7.86,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F70L Y143S V153L",3
"lib1","SARS-CoV-2","GTATATAAATAGGTGG",9,2.25,NA,NA,NA,NA,NA,NA,"stop","F8L I80* W106T P149Q",4
"lib1","SARS-CoV-2","GTATATAAATTTATGA",6,73.58,10.69,-0.08,0.09,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATATAACGCCCGGT",1,49.86,9.96,-0.8,0.06,2.4,1.02,0,">1 nonsynonymous","V32M F44Y Y123T",3
"lib1","SARS-CoV-2","GTATATACCCCACACA",1,7.02,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V77W",1
"lib1","SARS-CoV-2","GTATATACCTAACTAA",3,85.5,9.99,-0.77,0.08,2.56,1.05,0,">1 nonsynonymous","A18G A42V K56E F62K N110E",5
"lib1","SARS-CoV-2","GTATATAGAAAGTATT",3,69.58,10.38,-0.38,0.06,2.74,1.04,0,">1 nonsynonymous","R27S Y123W",2
"lib1","SARS-CoV-2","GTATATAGACACGGTA",4,29.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16S S43P T63C G86Y F99T F156M",6
"lib1","SARS-CoV-2","GTATATATAAGCAGAA",1,7.72,10.75,-0.01,0.07,2.83,1.12,0,">1 nonsynonymous","D97L S184A",2
"lib1","SARS-CoV-2","GTATATATAGTACTTT",3,65.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T85N D112R Y175E",3
"lib1","SARS-CoV-2","GTATATATTAAGGCAT",7,85.23,10.2,-0.56,0.04,2.87,1,0,">1 nonsynonymous","G155L T201W",2
"lib1","SARS-CoV-2","GTATATCAAAGTATCG",6,60.46,8.26,-2.51,0.22,1.5,1.12,0.02,">1 nonsynonymous","N120M Y165R",2
"lib1","SARS-CoV-2","GTATATCAACCGTGAC",1,110.3,8.11,-2.65,0.13,2.21,1.14,0.01,"1 nonsynonymous","G172A",1
"lib1","SARS-CoV-2","GTATATCTAACCAAAG",5,127.07,9.68,-1.09,0.03,2.87,1.05,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","GTATATCTCTGCCCCC",16,308.71,10.78,0.01,0.06,2.9,1.06,0,">1 nonsynonymous","S113A T201S",2
"lib1","SARS-CoV-2","GTATATCTGGAAAGAC",8,79.7,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D112W L162A",2
"lib1","SARS-CoV-2","GTATATCTTAAAGCTG",2,43.63,9.64,-1.12,0.09,2.7,1.08,0,">1 nonsynonymous","N4I Y119R",2
"lib1","SARS-CoV-2","GTATATCTTCCCAGAT",4,58.99,10.71,-0.06,0.1,2.88,1.08,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","GTATATGAATGAAAAC",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V D90L L131K",3
"lib1","SARS-CoV-2","GTATATGAGCCTTTGG",4,33.78,10.71,-0.05,0.07,2.93,1.03,0,"1 nonsynonymous","G83H",1
"lib1","SARS-CoV-2","GTATATGCAAAACAAC",4,76.42,6,-4.76,0.64,1.5,1.14,0.01,">1 nonsynonymous","L60Q F99R",2
"lib1","SARS-CoV-2","GTATATGCAGTGTAAT",7,112.65,9.78,-0.98,0.09,1.91,1.09,0,">1 nonsynonymous","A33L Y39K S43C F62L R73K E76A V173E",7
"lib1","SARS-CoV-2","GTATATGCATCCAATA",4,20.87,9.91,-0.85,0.12,2.22,1.04,0.01,">1 nonsynonymous","A18S P54T D97L S139F H189N",5
"lib1","SARS-CoV-2","GTATATGCGACCAAAA",3,90.4,10.09,-0.67,0.05,2.92,1,0,">1 nonsynonymous","L60F L125S",2
"lib1","SARS-CoV-2","GTATATGCTGGCATAG",5,49.24,8.56,-2.2,0.27,1.5,1.24,0.03,">1 nonsynonymous","Y35Q Y123I",2
"lib1","SARS-CoV-2","GTATATGTAACGCCCA",2,84.81,8.71,-2.06,0.1,2.41,1.06,0,">1 nonsynonymous","V32E Q176S",2
"lib1","SARS-CoV-2","GTATATGTCAATGAAA",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82V A105S N107D",3
"lib1","SARS-CoV-2","GTATATGTTATGCTAG",1,11.75,6.78,-3.98,0.33,1.5,1.07,0.01,">1 nonsynonymous","W23T Y50A T140P H189I",4
"lib1","SARS-CoV-2","GTATATTAAAAAAATT",1,5.74,10.85,0.09,0.1,2.82,1.15,0,"synonymous","",0
"lib1","SARS-CoV-2","GTATATTAACCATTTA",6,73.6,10.73,-0.03,0.04,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATATTAATACGGAT",3,22.81,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A89R Y123A Y165A",3
"lib1","SARS-CoV-2","GTATATTACACTAGAC",1,47.71,10.9,0.14,0.08,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATATTACGGCTGTG",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R K48S",2
"lib1","SARS-CoV-2","GTATATTAGGGACTCT",5,5.18,10.07,-0.7,0.13,2.75,1.02,0.01,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","GTATATTATCATGAAC",2,9.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43V N120I P161H",3
"lib1","SARS-CoV-2","GTATATTATTCTTTCA",4,0.51,NA,NA,NA,NA,NA,NA,"stop","F62* D112M K132L R179C",4
"lib1","SARS-CoV-2","GTATATTCAAAAACAG",2,54.63,6,-4.76,2,3,1.17,0,">1 nonsynonymous","S108P I142R",2
"lib1","SARS-CoV-2","GTATATTCATGGTCTA",5,29.33,7.86,-2.91,0.34,1.5,1,0.04,">1 nonsynonymous","V20L C61R",2
"lib1","SARS-CoV-2","GTATATTGCATCAACC",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M K94I L131Y",3
"lib1","SARS-CoV-2","GTATATTGTTGACACT",12,74.14,6.13,-4.63,0.8,1.5,1.18,0.02,">1 nonsynonymous","A14T V65G Q79R A145C",4
"lib1","SARS-CoV-2","GTATATTGTTTCACCG",7,2.08,NA,NA,NA,NA,NA,NA,"stop","K26* V37R D98M C102L S113P F156*",6
"lib1","SARS-CoV-2","GTATATTTAAAGATTA",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35W L60R I104R",3
"lib1","SARS-CoV-2","GTATCAAAAAATCCGT",3,27.31,6,-4.76,1.3,1.5,1.18,0.03,">1 nonsynonymous","E76T E135W T201C",3
"lib1","SARS-CoV-2","GTATCAACATCCTTAA",2,66.42,10.27,-0.49,0.05,2.8,1.04,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","GTATCAAGATAATCCA",5,2.12,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","GTATCAATAAACACCA",3,25.46,9.57,-1.19,0.38,1.5,1,0.07,">1 nonsynonymous","F17R D90S",2
"lib1","SARS-CoV-2","GTATCAATAGATCCAA",4,58.02,10.69,-0.08,0.04,2.92,1.03,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","GTATCAATAGCCTCTA",7,69.55,8.52,-2.25,0.18,1.5,1.09,0.01,">1 nonsynonymous","G9V V32H W106C",3
"lib1","SARS-CoV-2","GTATCACAAGGAGGTG",6,16.9,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","Y119L E135W T140L P191H",4
"lib1","SARS-CoV-2","GTATCACCATAAAGGT",1,17.8,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F12D N120E Y165G T201K",4
"lib1","SARS-CoV-2","GTATCACCATAAAGTA",1,1.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136Q",1
"lib1","SARS-CoV-2","GTATCACCATGTCGTA",7,105.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A E10K K94C F134H T148M",5
"lib1","SARS-CoV-2","GTATCACTAACTCCAT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","T15W D34P F44R N64F P133*",5
"lib1","SARS-CoV-2","GTATCAGAATAATTTT",1,8.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G117S R127L G155S",3
"lib1","SARS-CoV-2","GTATCAGAATAGAGGA",2,28.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9K S19K R136D S147I P149E G155Y T201D",7
"lib1","SARS-CoV-2","GTATCAGAGCCAGCAA",4,28.9,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S113Y V181G T201L",3
"lib1","SARS-CoV-2","GTATCAGAGTAAGTTT",2,89.5,10.83,0.06,0.06,2.94,1.02,0,"1 nonsynonymous","E186N",1
"lib1","SARS-CoV-2","GTATCAGATCACTAAA",1,8.71,10.44,-0.33,0.26,2.32,1.21,0.02,">1 nonsynonymous","I2L P133I",2
"lib1","SARS-CoV-2","GTATCATATCCCTCTA",11,143.63,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I2N Y159S A190E",3
"lib1","SARS-CoV-2","GTATCATCAAAAGTCC",3,69.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9F N92R W106D",3
"lib1","SARS-CoV-2","GTATCATCATTGTACT",8,121.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55S D68R",2
"lib1","SARS-CoV-2","GTATCATCCCACGTTA",2,30.97,10.24,-0.52,0.14,2.63,1.01,0.01,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","GTATCATCTCAAAGCA",3,86.42,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","D68M P177A",2
"lib1","SARS-CoV-2","GTATCATTAAGCAGTA",12,216.89,9.94,-0.82,0.05,2.54,1.04,0,">1 nonsynonymous","S19G N64W K87Y",3
"lib1","SARS-CoV-2","GTATCCAAAGAATAAA",4,26.25,8.69,-2.08,0.23,1.5,1.16,0.02,">1 nonsynonymous","F8I A14E C31L V37M D98V T148G",6
"lib1","SARS-CoV-2","GTATCCAAAGCCACGA",2,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M K128P T148S G172C",4
"lib1","SARS-CoV-2","GTATCCAAATTGCCCA",13,4.58,NA,NA,NA,NA,NA,NA,"stop","R25F N58F D112S P149S Q176*",5
"lib1","SARS-CoV-2","GTATCCAATACAAACA",1,26.14,9.92,-0.84,0.1,2.03,1.04,0,">1 nonsynonymous","C6A F62L E186R",3
"lib1","SARS-CoV-2","GTATCCACCCGAAAAC",2,11.78,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G101W K198D",2
"lib1","SARS-CoV-2","GTATCCAGAACATGGT",6,89.24,10.77,0.01,0.06,2.89,1.07,0,">1 nonsynonymous","S129V P197Q T201D",3
"lib1","SARS-CoV-2","GTATCCAGCAAACTAA",1,96.72,10.1,-0.66,0.1,2.63,1.02,0,">1 nonsynonymous","Y35G A105W",2
"lib1","SARS-CoV-2","GTATCCATGAGCCGAA",10,24.86,6,-4.76,1.51,1.5,1.22,0.04,">1 nonsynonymous","T15V N92R L125H T170S",4
"lib1","SARS-CoV-2","GTATCCATGCGCTATA",3,13.99,10.06,-0.71,0.19,2.02,1.12,0.01,">1 nonsynonymous","T15V Y39V K56N C61S T100R V173Y",6
"lib1","SARS-CoV-2","GTATCCCAAAGTCACT",10,35.5,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G86M D137W",2
"lib1","SARS-CoV-2","GTATCCCACCAAAAAG",3,0.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A190D",1
"lib1","SARS-CoV-2","GTATCCCAGTAAATAG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R A33T G83C I88W D137N",5
"lib1","SARS-CoV-2","GTATCCCTAAAGGTAG",4,18.95,7.56,-3.21,0.28,1.5,1.06,0.02,">1 nonsynonymous","K87T Y121L F167N",3
"lib1","SARS-CoV-2","GTATCCGAAAAGATAG",2,9.23,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S45T G146Q Y165C",3
"lib1","SARS-CoV-2","GTATCCGATATGAGCA",4,20.68,8.17,-2.6,0.18,2.24,1.1,0.01,">1 nonsynonymous","V65I N157V",2
"lib1","SARS-CoV-2","GTATCCTAAAAATTGA",3,91.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S29H Y35K Y93L L188M T201K",5
"lib1","SARS-CoV-2","GTATCCTTACCAAAGT",3,35.58,7.24,-3.53,0.31,1.5,1.17,0.05,">1 nonsynonymous","A14S D34R K87M P96T",4
"lib1","SARS-CoV-2","GTATCCTTGTTCTAAA",4,40.82,6.01,-4.76,1.34,1.5,1.19,0.03,">1 nonsynonymous","G86L P96G",2
"lib1","SARS-CoV-2","GTATCGAATGAGAGTG",8,145.61,10.75,-0.02,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATCGAGGGGTGTCA",6,53.59,6.27,-4.5,0.72,1.5,1.3,0.02,">1 nonsynonymous","P7K P82Y",2
"lib1","SARS-CoV-2","GTATCGCGACTATCCT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib1","SARS-CoV-2","GTATCGCGGAAAATGA",1,0.53,NA,NA,NA,NA,NA,NA,"stop","L38M G83D N107A K114* F134S",5
"lib1","SARS-CoV-2","GTATCGCGGCAATATA",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I I72Q C102S G116N",4
"lib1","SARS-CoV-2","GTATCGCTCCTAGACA",3,33.62,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G101W E135M",2
"lib1","SARS-CoV-2","GTATCGCTCGACCCTA",7,84.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10L F62D R78T G117D R127M C150R",6
"lib1","SARS-CoV-2","GTATCGCTGACGTAAC",6,47.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","W23S G166L",2
"lib1","SARS-CoV-2","GTATCGCTTACCATTT",4,50.48,6.42,-4.34,0.55,1.5,1.21,0.02,">1 nonsynonymous","Y21I N107G",2
"lib1","SARS-CoV-2","GTATCGGCTCTAATAT",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V I72A N151S Y165M",4
"lib1","SARS-CoV-2","GTATCGTATCCATGCA",3,37.52,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A22T T55C R78F Q168D L183C",5
"lib1","SARS-CoV-2","GTATCGTGAATTGCTA",5,47.3,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N92L Y165D",2
"lib1","SARS-CoV-2","GTATCGTGCGAGTTCT",7,0.19,NA,NA,NA,NA,NA,NA,"stop","C49L A105S F126*",3
"lib1","SARS-CoV-2","GTATCTAAAAATGTGA",3,50.12,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C61R F70N V115G N171L",4
"lib1","SARS-CoV-2","GTATCTAACAACCATT",10,60.21,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35D N118P G174V",3
"lib1","SARS-CoV-2","GTATCTACGAGTCTCT",5,22.07,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T3R R179S",2
"lib1","SARS-CoV-2","GTATCTAGGTATTGTC",3,2.26,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","GTATCTATCATATCAT",11,99.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P82A C150S",2
"lib1","SARS-CoV-2","GTATCTCACACTCATA",2,84.1,9.93,-0.83,0.09,2.53,1.03,0,">1 nonsynonymous","P7Y D90T",2
"lib1","SARS-CoV-2","GTATCTCAGCTTAGAA",12,2.96,NA,NA,NA,NA,NA,NA,"stop","L5* A18T",2
"lib1","SARS-CoV-2","GTATCTCCTCCGATTT",3,20.12,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","F44L T55L C61T G83P Y91I P96R",6
"lib1","SARS-CoV-2","GTATCTCGACTATATG",6,63.45,10.85,0.09,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATCTCTGAACTTAT",7,37.73,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D34H D68L L95I S113I Y119T",5
"lib1","SARS-CoV-2","GTATCTTAAGGATATA",1,19.79,10.76,-0.01,0.09,2.9,1.07,0,">1 nonsynonymous","L5P S43V",2
"lib1","SARS-CoV-2","GTATCTTATGGGCATT",4,2.22,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTATCTTTAAAGCATA",4,35.37,9.83,-0.93,0.12,2.25,1.13,0.01,">1 nonsynonymous","P133I I142L",2
"lib1","SARS-CoV-2","GTATCTTTTAGAGCGG",4,117.08,10.48,-0.29,0.05,2.82,1.05,0,">1 nonsynonymous","E141P N151K",2
"lib1","SARS-CoV-2","GTATGAAAACGAACAC",1,8.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","W106L Y123V",2
"lib1","SARS-CoV-2","GTATGAAAGAAAATAT",3,50.81,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44L D68A Q144L T201V",4
"lib1","SARS-CoV-2","GTATGAAAGTTATGCA",8,113.17,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S36N N64A A89S G101N N120Y N151D",6
"lib1","SARS-CoV-2","GTATGAAATACTCAAT",3,106.36,10.65,-0.12,0.08,2.89,1.09,0,"1 nonsynonymous","Q163R",1
"lib1","SARS-CoV-2","GTATGAAATTTTAAAT",1,73.99,10.65,-0.11,0.07,2.94,1.02,0,"1 nonsynonymous","S113A",1
"lib1","SARS-CoV-2","GTATGAACAAAAGGTC",1,34.15,10.22,-0.55,0.1,2.79,1.02,0.01,"1 nonsynonymous","E10F",1
"lib1","SARS-CoV-2","GTATGAACGCAAGATT",14,241.71,10.29,-0.48,0.05,2.78,1.01,0,">1 nonsynonymous","N1L D90M N120H",3
"lib1","SARS-CoV-2","GTATGAACGTTAGGAA",3,59.12,10.12,-0.64,0.05,2.64,1.02,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","GTATGAACTATAAAAG",6,95.63,10.72,-0.05,0.09,2.89,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GTATGAACTGAAAAAA",4,41.52,10.67,-0.09,0.09,2.92,1.04,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","GTATGAAGATCAGATT",4,40.34,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S41L D68R V77T S113V",4
"lib1","SARS-CoV-2","GTATGAAGCAAATGCA",1,1.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89H",1
"lib1","SARS-CoV-2","GTATGAATGAAACGTG",10,79.87,10.06,-0.7,0.09,2.37,1.05,0,"1 nonsynonymous","P133R",1
"lib1","SARS-CoV-2","GTATGAATTCCGAGTG",4,36.2,10.83,0.06,0.09,2.87,1.08,0,"1 nonsynonymous","L5N",1
"lib1","SARS-CoV-2","GTATGAATTGATAGTA",3,6.41,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F44A F99R N107S",3
"lib1","SARS-CoV-2","GTATGACAAAGATCTA",6,190.73,9.61,-1.15,0.11,2.42,1.05,0,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","GTATGACATTTATAAG",9,95.45,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N1L G86E R127D",3
"lib1","SARS-CoV-2","GTATGACCAGACACAA",3,7.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33R P96Q G166F",3
"lib1","SARS-CoV-2","GTATGACCGAGTAACA",2,15.9,6.51,-4.26,0.39,1.5,1.08,0.02,">1 nonsynonymous","N64Q P161I P177L",3
"lib1","SARS-CoV-2","GTATGACCTATCGCAG",1,38.5,7.81,-2.95,0.46,1.5,1,0.06,">1 nonsynonymous","A22L P82S K132S",3
"lib1","SARS-CoV-2","GTATGACGAAGCATGT",2,41.65,10.65,-0.12,0.08,2.92,1.01,0,">1 nonsynonymous","N120R P149L",2
"lib1","SARS-CoV-2","GTATGACGAATTACTA",9,64.89,10.83,0.06,0.08,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATGACGTGTCAGAA",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D A33M S53C L95P K199G",5
"lib1","SARS-CoV-2","GTATGACTAATGAGTT",3,45.52,6.37,-4.39,0.21,2.32,1.11,0,">1 nonsynonymous","D90Y Y175E",2
"lib1","SARS-CoV-2","GTATGAGACAAAACAC",3,32.15,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V37R L60F G86D R179S",4
"lib1","SARS-CoV-2","GTATGAGACCAGGGCC",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N G51P V65Y L95M",4
"lib1","SARS-CoV-2","GTATGAGATAGTAGAT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","T46H G74V Y123*",3
"lib1","SARS-CoV-2","GTATGAGATCAGAGAT",4,23.76,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9K D90I W106S S113C",4
"lib1","SARS-CoV-2","GTATGAGCGACTTTAG",5,72.73,10.74,-0.02,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATGAGTAAAACTAC",3,14.76,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y66W V71D L122K V173Y",4
"lib1","SARS-CoV-2","GTATGAGTAAAACTTA",3,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N P82L",2
"lib1","SARS-CoV-2","GTATGAGTTTGATTAA",3,0.95,NA,NA,NA,NA,NA,NA,"stop","A14S S41G F62W S139*",4
"lib1","SARS-CoV-2","GTATGATATAAAACAA",9,33.04,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","A18L G83M D98W I104M E135S G155D T170E",7
"lib1","SARS-CoV-2","GTATGATCATGGCACA",6,77.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36M I88R Y143C",3
"lib1","SARS-CoV-2","GTATGCAAAGCCCTAT",1,87.04,9.03,-1.74,0.07,2.75,1.11,0,">1 nonsynonymous","T3G F47I L125Q Y178V",4
"lib1","SARS-CoV-2","GTATGCAAATGACAAA",25,292.58,10.72,-0.04,0.06,2.87,1.07,0,"1 nonsynonymous","G83R",1
"lib1","SARS-CoV-2","GTATGCAATATACTGA",3,45.41,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F12W C61V K87C N107F R136V T201S",6
"lib1","SARS-CoV-2","GTATGCACATGAATGG",2,17.78,9.88,-0.88,0.39,1.5,1,0.07,">1 nonsynonymous","F8S S53R D59R",3
"lib1","SARS-CoV-2","GTATGCAGAGTAGATT",6,49.48,6.04,-4.72,0.97,1.5,1.15,0.02,">1 nonsynonymous","K87E V115K G172T",3
"lib1","SARS-CoV-2","GTATGCAGCACCTCTC",4,38.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C T85L N120M Y178F",4
"lib1","SARS-CoV-2","GTATGCAGGAAACAAG",3,71.91,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9E S45T A89Q G117H Y165S",5
"lib1","SARS-CoV-2","GTATGCCAAGAGCCAC",3,24.13,10.79,0.03,0.07,2.89,1.1,0,"1 nonsynonymous","A22H",1
"lib1","SARS-CoV-2","GTATGCCACTATTACT",1,50.62,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86L N107L Y178F",3
"lib1","SARS-CoV-2","GTATGCCATACGCATA",1,1.1,NA,NA,NA,NA,NA,NA,"stop","G83W E154K C195*",3
"lib1","SARS-CoV-2","GTATGCGAATCCAGTA",3,50.44,9.98,-0.79,0.08,2.63,1.03,0,">1 nonsynonymous","I28V F44A G146S",3
"lib1","SARS-CoV-2","GTATGCGGCTCTGTTT",2,9.03,9.77,-1,0.4,1.5,1.17,0.04,">1 nonsynonymous","Y50K L187T",2
"lib1","SARS-CoV-2","GTATGCGTAATCCGGT",2,28.24,9.04,-1.72,0.22,1.5,1.14,0.02,">1 nonsynonymous","V37G G51M V52E",3
"lib1","SARS-CoV-2","GTATGCGTGATACCAC",5,31.49,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I104H R127T P149C F156L Y178G",5
"lib1","SARS-CoV-2","GTATGCTAACCGATAA",3,93.96,6.4,-4.36,0.48,1.5,1.11,0.02,">1 nonsynonymous","R25P S147F N157P P169T",4
"lib1","SARS-CoV-2","GTATGCTTGGATAAAA",5,72.69,10.81,0.05,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATGCTTGGCCACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* V77F Q144H",3
"lib1","SARS-CoV-2","GTATGGAAAAAGGCAA",5,35.45,6.22,-4.55,0.76,1.5,1.14,0.03,">1 nonsynonymous","C61E I72V D97M R127Q N157S",5
"lib1","SARS-CoV-2","GTATGGAATAAAACAC",1,15.18,6.05,-4.72,1.22,3,1.17,0.01,">1 nonsynonymous","P54H L131W E141V",3
"lib1","SARS-CoV-2","GTATGGACAAGGCCGA",3,4.48,NA,NA,NA,NA,NA,NA,"stop","T55* Y93P",2
"lib1","SARS-CoV-2","GTATGGACAGGTACTT",8,146.62,9.47,-1.29,0.05,2.82,1.09,0,">1 nonsynonymous","F156T Q168S",2
"lib1","SARS-CoV-2","GTATGGACATATTATT",3,49.28,9.34,-1.42,0.15,2.3,1.13,0.01,">1 nonsynonymous","L5I P161Q V173R",3
"lib1","SARS-CoV-2","GTATGGACATTTACAC",6,42.1,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35R L95Y",2
"lib1","SARS-CoV-2","GTATGGACTATATGGA",2,17.18,6.18,-4.59,1.04,1.5,1.14,0.03,">1 nonsynonymous","R16C V52P D59G K128L S139C",5
"lib1","SARS-CoV-2","GTATGGATCATCAAAG",1,5.39,10.93,0.17,0.11,2.85,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATGGCAGATGACAA",11,201.1,9.02,-1.75,0.1,2.03,1.12,0,">1 nonsynonymous","N107Q G155R",2
"lib1","SARS-CoV-2","GTATGGCGGTCATACA",4,31.52,6,-4.76,0.82,3,1.17,0.01,">1 nonsynonymous","C6F R16L K48M Y119M",4
"lib1","SARS-CoV-2","GTATGGCTAACTATAG",4,27.35,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R27C S69K K114L",3
"lib1","SARS-CoV-2","GTATGGCTATGCCTAA",10,39.65,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9S S36Y K94L Y121T G146L Y178S",6
"lib1","SARS-CoV-2","GTATGGGCATCCCTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y L60N A145S",3
"lib1","SARS-CoV-2","GTATGGGCTGAAGAAC",2,50.25,10.89,0.13,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTATGTAAACAATTAC",3,6.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14R N30I P149I",3
"lib1","SARS-CoV-2","GTATGTAAACCTGATT",2,17.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P R127Q",2
"lib1","SARS-CoV-2","GTATGTAAACTTAGTT",1,7.05,9.98,-0.78,0.5,1.9,1.06,0.03,">1 nonsynonymous","L38V T140P P149R V173D",4
"lib1","SARS-CoV-2","GTATGTAACACTCACC",3,41.98,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6G N40V T140Q F167T",4
"lib1","SARS-CoV-2","GTATGTAAGTCAGACC",2,10.25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99C F167R",2
"lib1","SARS-CoV-2","GTATGTCATACATAAC",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80L L183T",2
"lib1","SARS-CoV-2","GTATGTCCGCCTTGCT",8,53.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R25V I80Y T201R",3
"lib1","SARS-CoV-2","GTATGTCCTCATTTGA",4,106.68,9.51,-1.25,0.12,1.99,1.07,0.01,">1 nonsynonymous","T46S Y91H N120I",3
"lib1","SARS-CoV-2","GTATGTCGAAATTACC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","S41T F47G N110D E141*",4
"lib1","SARS-CoV-2","GTATGTCTAAAAAATA",5,52.17,6,-4.76,1.14,1.5,1.16,0.01,">1 nonsynonymous","E10T I138H C158V",3
"lib1","SARS-CoV-2","GTATGTCTCGTCTCGT",6,8.35,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","GTATGTGACTTATAAA",2,46.25,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N58D G74F R124E",3
"lib1","SARS-CoV-2","GTATGTGGCATGACTC",1,19.36,8.79,-1.97,0.42,1.5,1,0.07,">1 nonsynonymous","N1Y S43Y Y121W L162M",4
"lib1","SARS-CoV-2","GTATGTGTGGTGCAAA",1,1.97,NA,NA,NA,NA,NA,NA,"stop","N58V Y175P L188*",3
"lib1","SARS-CoV-2","GTATGTTAAAAAAACA",3,33.94,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D68G Y93H S129A Y143R L183Y",5
"lib1","SARS-CoV-2","GTATGTTGGACCTACC",7,0.39,NA,NA,NA,NA,NA,NA,"stop","A14S F44E Y91D D98K T140L Y175*",6
"lib1","SARS-CoV-2","GTATGTTTTTATTTAC",1,6.69,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V32I L162D",2
"lib1","SARS-CoV-2","GTATTAAAAAACTCTT",6,155.87,10.78,0.01,0.05,2.94,1.01,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","GTATTAAAAAATCCAC",2,60.72,9.06,-1.71,0.15,1.81,1.16,0.01,">1 nonsynonymous","C6S C61M P133E",3
"lib1","SARS-CoV-2","GTATTAAAAATCAAAT",6,14.87,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R25F D34H C49F G51Y T201D",5
"lib1","SARS-CoV-2","GTATTAAAACCAACCA",5,2.39,NA,NA,NA,NA,NA,NA,"stop","N107* K114T",2
"lib1","SARS-CoV-2","GTATTAAACAAACAAC",3,0.91,NA,NA,NA,NA,NA,NA,"stop","C61* Q84L F99P",3
"lib1","SARS-CoV-2","GTATTAAAGAATGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R E10V V115L Y143* N171E Q176P K198M",7
"lib1","SARS-CoV-2","GTATTAAAGGCTGAGT",11,6.2,9.61,-1.16,0.5,2.03,1,0.07,">1 nonsynonymous","N4R A33P L95G G166N Y175N S200Q",6
"lib1","SARS-CoV-2","GTATTAAATAACGTGA",3,19.07,6.64,-4.12,0.4,1.5,1.11,0.03,"1 nonsynonymous","V181E",1
"lib1","SARS-CoV-2","GTATTAAATAGTAAAT",1,3.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTATTAACAAATGACG",4,167.72,9.26,-1.51,0.07,2.8,1.13,0,">1 nonsynonymous","Y119M G152S",2
"lib1","SARS-CoV-2","GTATTAACCATCACTG",1,23.51,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G101V Q144L S184L",3
"lib1","SARS-CoV-2","GTATTAAGCAAACGTA",2,10.14,11.06,0.29,0.1,2.82,1.14,0,">1 nonsynonymous","G9D V37K K48S P197R",4
"lib1","SARS-CoV-2","GTATTAAGCTCTACTA",1,35.61,10.85,0.08,0.1,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATTAAGGATGATAT",3,12.85,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N107F L122W N151G",3
"lib1","SARS-CoV-2","GTATTAATAACCAGAT",1,28.71,9.92,-0.85,0.14,2.1,1.06,0.01,">1 nonsynonymous","A14S S139I",2
"lib1","SARS-CoV-2","GTATTAATATCGAAAT",4,44.61,10.09,-0.68,0.08,2.89,1.04,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","GTATTAATGAACACAG",7,17.11,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D34F D112I G117D",3
"lib1","SARS-CoV-2","GTATTAATTATTCTAA",2,9.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25P A42T Y91R",3
"lib1","SARS-CoV-2","GTATTAATTCTTCTTG",3,101.33,10.2,-0.57,0.08,2.44,1,0,">1 nonsynonymous","D98I F134L",2
"lib1","SARS-CoV-2","GTATTAATTGAACAGT",3,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N157I V181L",2
"lib1","SARS-CoV-2","GTATTACAAATAACAT",4,18.04,7.53,-3.24,0.35,1.5,1.03,0.06,">1 nonsynonymous","V20W C61L L162E P191K",4
"lib1","SARS-CoV-2","GTATTACACCGACAAT",3,47.56,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F44T N64D F99T S113R V173I",5
"lib1","SARS-CoV-2","GTATTACAGGAAACCT",2,30.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L L131S",2
"lib1","SARS-CoV-2","GTATTACAGTCCCCCC",7,86.77,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I2G T55G V65K R179D T201A",5
"lib1","SARS-CoV-2","GTATTACCAAACTCAT",2,64.04,10.66,-0.1,0.05,2.84,1.1,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","GTATTACCGCAATGGA",4,29.82,10.18,-0.59,0.12,2.43,1.12,0.01,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","GTATTACCGTTAACAA",3,87.4,10.79,0.03,0.1,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATTACCTAGACTGA",11,407.31,7.73,-3.03,0.23,1.5,1.1,0.02,">1 nonsynonymous","Y39H G166L Y178I",3
"lib1","SARS-CoV-2","GTATTACCTGAATAGT",8,101.77,10.13,-0.63,0.05,2.9,1.02,0,"1 nonsynonymous","E154V",1
"lib1","SARS-CoV-2","GTATTACTACGATCAA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","F44L L95* F160Y R179K F185S",5
"lib1","SARS-CoV-2","GTATTACTGACACAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8I S113*",2
"lib1","SARS-CoV-2","GTATTACTTGGCGTGC",1,25.51,10.72,-0.04,0.08,2.96,1.04,0,">1 nonsynonymous","K26R T85G",2
"lib1","SARS-CoV-2","GTATTAGATCATATAC",1,25.21,9,-1.76,0.26,1.5,1.12,0.04,">1 nonsynonymous","N4S S43Y C158Q",3
"lib1","SARS-CoV-2","GTATTAGGGTAAGCAT",7,110.43,10.78,0.01,0.06,2.94,1.01,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","GTATTAGTTGAAGCTA",8,0.57,NA,NA,NA,NA,NA,NA,"stop","E10W C31V K48* D98H",4
"lib1","SARS-CoV-2","GTATTATACCACAGTT",11,173.03,6.09,-4.67,0.71,1.5,1.18,0.01,">1 nonsynonymous","F12L N109T R136S",3
"lib1","SARS-CoV-2","GTATTATCCAAACACT",1,18.53,6.23,-4.53,0.58,1.5,1.11,0.02,">1 nonsynonymous","K56V A67I P96F N130D T148V",5
"lib1","SARS-CoV-2","GTATTATCGAAGATTA",5,70.04,10.67,-0.1,0.08,2.83,1.08,0,">1 nonsynonymous","T3L N130V P149T",3
"lib1","SARS-CoV-2","GTATTATCGGTTCTTG",8,56.95,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G86V F99Y N157S",3
"lib1","SARS-CoV-2","GTATTATTATCGAGTT",2,18.4,10.58,-0.18,0.09,2.91,1.02,0,">1 nonsynonymous","K128F F160H",2
"lib1","SARS-CoV-2","GTATTATTTTTAAAAA",3,26.62,10.73,-0.04,0.08,2.92,1.07,0,">1 nonsynonymous","N130R F160W",2
"lib1","SARS-CoV-2","GTATTCAAGCCAATCA",4,0.46,NA,NA,NA,NA,NA,NA,"stop","C6* C61L E135*",3
"lib1","SARS-CoV-2","GTATTCAAGGATTAAG",5,34.29,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I80K E135W",2
"lib1","SARS-CoV-2","GTATTCAAGGCCACCA",2,46.79,10.82,0.06,0.08,2.94,1.02,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GTATTCACACATATCA",1,35.55,7.29,-3.48,0.17,1.76,1.12,0.01,"1 nonsynonymous","C150T",1
"lib1","SARS-CoV-2","GTATTCACAGGTATCG",1,4.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15I",1
"lib1","SARS-CoV-2","GTATTCACGAGAAGTC",3,12.66,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R27T A89T V103K S129N",4
"lib1","SARS-CoV-2","GTATTCAGAGTTTGGG",1,9.18,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R27V G51C Y93Q S113D",4
"lib1","SARS-CoV-2","GTATTCAGGACTATCA",4,64.77,9.32,-1.44,0.15,1.66,1.15,0.01,">1 nonsynonymous","T15I P96H H189N",3
"lib1","SARS-CoV-2","GTATTCATACCTACCT",19,86.43,6.19,-4.58,0.74,1.5,1.23,0.02,">1 nonsynonymous","V11L R25E S41F C49L L111R Q144I G166A G174E",8
"lib1","SARS-CoV-2","GTATTCATACTTAAAA",1,14.15,10.24,-0.52,0.16,2.62,1.06,0.01,">1 nonsynonymous","L5D F44L G83Q",3
"lib1","SARS-CoV-2","GTATTCATTGGAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* C49S L95F G155Q A192E",5
"lib1","SARS-CoV-2","GTATTCCAATTCCCTA",2,43.09,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","R16D R27K G86L T100C L131S C150H",6
"lib1","SARS-CoV-2","GTATTCCGCCAGCGGC",5,24.3,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y50N L57K",2
"lib1","SARS-CoV-2","GTATTCGAACTTTCCG",2,60.94,9.88,-0.88,0.11,2.67,1.04,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","GTATTCGAAGAAGATA",10,48.45,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N4T W23V G101V Q168L",4
"lib1","SARS-CoV-2","GTATTCGCTCCAAGAC",1,86.4,6,-4.76,2,3,1.18,0,">1 nonsynonymous","R27G N40C G51T",3
"lib1","SARS-CoV-2","GTATTCGTAGTGAAAG",3,7.07,10.11,-0.65,0.16,2.89,1.04,0,">1 nonsynonymous","G9K C31F S41N",3
"lib1","SARS-CoV-2","GTATTCGTTTACTGAC",1,15.28,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C31L S43V D59E Y91T Q163G",5
"lib1","SARS-CoV-2","GTATTCTAACGTTAAT",5,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103L S113A",2
"lib1","SARS-CoV-2","GTATTCTACATTATTA",1,22.44,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","K56V S113E L122R V173S",4
"lib1","SARS-CoV-2","GTATTCTACGTATACG",3,14.23,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G51R N120L E135S V181R",4
"lib1","SARS-CoV-2","GTATTCTATTTCATAA",9,83.84,9.82,-0.94,0.11,1.86,1.11,0,">1 nonsynonymous","A14L S29I S41M L60M",4
"lib1","SARS-CoV-2","GTATTCTCTCACAGGA",4,111.95,8.02,-2.74,0.25,1.5,1.09,0.02,">1 nonsynonymous","K56V S69I K198I",3
"lib1","SARS-CoV-2","GTATTCTTCTTGTCCG",5,88.62,6,-4.76,2,3,1.17,0,">1 nonsynonymous","I28N L95E E141Y",3
"lib1","SARS-CoV-2","GTATTGAAAATACATA",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D A22G V37M D59R C158R",5
"lib1","SARS-CoV-2","GTATTGAACATCAGGG",2,5.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N D112N E141R P191L",4
"lib1","SARS-CoV-2","GTATTGAACCCGGAAT",2,38.14,10.73,-0.04,0.05,2.91,1.05,0,">1 nonsynonymous","G9S P191T",2
"lib1","SARS-CoV-2","GTATTGAACTAAAACA",5,84.43,10.41,-0.35,0.04,2.87,1.07,0,">1 nonsynonymous","N1H N40P K128T",3
"lib1","SARS-CoV-2","GTATTGAAGAACCTAT",5,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S V103K S129T Y143R N151I T201I",6
"lib1","SARS-CoV-2","GTATTGACAAGCCCCG",5,164.59,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N64C N92L",2
"lib1","SARS-CoV-2","GTATTGACCCTCGGAT",6,30.36,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V11Q C102D Y121S S129A",4
"lib1","SARS-CoV-2","GTATTGAGATATCCTA",6,75.58,10.79,0.02,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATTGAGCATTAATG",2,17.19,10.16,-0.61,0.13,2.61,1,0.01,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","GTATTGATACATAGAA",4,160.32,10.85,0.08,0.07,2.87,1.02,0,"1 nonsynonymous","L122V",1
"lib1","SARS-CoV-2","GTATTGATGCGTAGGT",5,23.75,6.13,-4.63,0.75,1.5,1.16,0.02,">1 nonsynonymous","L60E K94D K198L",3
"lib1","SARS-CoV-2","GTATTGCAGAATTAAG",8,73.55,10.71,-0.05,0.05,2.89,1.08,0,">1 nonsynonymous","V52L K198W",2
"lib1","SARS-CoV-2","GTATTGCAGGGTATAG",1,17.82,6.05,-4.71,1.22,1.5,1.15,0.04,">1 nonsynonymous","A22C L60V G86K C102F R127H S164I",6
"lib1","SARS-CoV-2","GTATTGCTATATTGAC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","G116C G146* H189Y",3
"lib1","SARS-CoV-2","GTATTGGAACAACCTG",3,30.66,7.78,-2.99,0.32,1.5,1.25,0.03,">1 nonsynonymous","D59A P82L L122A",3
"lib1","SARS-CoV-2","GTATTGGTAATACTAA",9,166.38,10.32,-0.45,0.04,2.92,1,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","GTATTGGTTCTAACCA",11,162.79,10.44,-0.33,0.05,2.92,1.04,0,">1 nonsynonymous","V65C A145G",2
"lib1","SARS-CoV-2","GTATTGTATACACCAG",8,88.28,9.98,-0.78,0.12,2.78,1.06,0.01,">1 nonsynonymous","L5E S43R N120T",3
"lib1","SARS-CoV-2","GTATTGTTCCAATAAA",2,15.27,10.55,-0.22,0.1,2.84,1.07,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","GTATTGTTTAGTAGGT",9,78.35,10.7,-0.07,0.1,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GTATTTAAGGCTCCTC",2,8.06,8.78,-1.98,0.17,1.5,1.1,0.02,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","GTATTTAAGTAGTCTA",4,44.49,10.56,-0.21,0.06,2.87,1.07,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","GTATTTAATTTTCACA",2,16.58,10.67,-0.1,0.09,2.9,1,0,">1 nonsynonymous","P54A Y121L Q163L",3
"lib1","SARS-CoV-2","GTATTTACAATGAACT",3,2.97,NA,NA,NA,NA,NA,NA,"stop","E10L C31* G83D V173N",4
"lib1","SARS-CoV-2","GTATTTACTAGGTCCA",4,41.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6K K128S E135N C150G",4
"lib1","SARS-CoV-2","GTATTTAGAACAATAG",3,33.68,9.97,-0.8,0.12,2.41,1.03,0,">1 nonsynonymous","G9A W106L",2
"lib1","SARS-CoV-2","GTATTTAGATGCAAAG",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P F156K",2
"lib1","SARS-CoV-2","GTATTTAGTGAAAACA",2,41.14,8.07,-2.69,0.23,1.59,1.15,0.02,"1 nonsynonymous","Y165D",1
"lib1","SARS-CoV-2","GTATTTATGACCTTGA",5,56.88,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","S19L G86K T100N Y119D T201G",5
"lib1","SARS-CoV-2","GTATTTATTAACAAAA",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D F70S",2
"lib1","SARS-CoV-2","GTATTTATTGAATGCT",2,31.45,6,-4.76,2,3,1.11,0,">1 nonsynonymous","T100E W106P F126G Y165P T201S",5
"lib1","SARS-CoV-2","GTATTTCCATATTACG",6,74.85,9.29,-1.48,0.1,1.72,1.1,0,">1 nonsynonymous","V11E K128L",2
"lib1","SARS-CoV-2","GTATTTCCCGAGCAGG",1,10.14,9.03,-1.74,0.17,1.92,1.03,0.02,"1 nonsynonymous","R127C",1
"lib1","SARS-CoV-2","GTATTTCCTTCTATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* Y91S G174R",3
"lib1","SARS-CoV-2","GTATTTCGTGAGTCCA",1,43.9,8.34,-2.42,0.19,1.61,1.14,0.01,">1 nonsynonymous","V32Q Y165A",2
"lib1","SARS-CoV-2","GTATTTGCCAGTGTTA",1,106.86,9.87,-0.9,0.04,2.87,1.05,0,">1 nonsynonymous","I104M F156T",2
"lib1","SARS-CoV-2","GTATTTGCTCTTGTGA",5,21.39,7.41,-3.36,0.33,1.5,1.11,0.03,">1 nonsynonymous","A42W C49F I142H",3
"lib1","SARS-CoV-2","GTATTTTAGCAGGGAC",4,1.88,NA,NA,NA,NA,NA,NA,"stop","L95V R124* P169N",3
"lib1","SARS-CoV-2","GTATTTTATAAGAAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T K128D",2
"lib1","SARS-CoV-2","GTATTTTATATTAAAA",6,11.43,6,-4.76,1.08,3,1.19,0.01,">1 nonsynonymous","T3M N64R R78H V103H Q144R Q176A",6
"lib1","SARS-CoV-2","GTATTTTATTGCGATA",6,44.76,8.6,-2.16,0.38,1.5,1.08,0.07,">1 nonsynonymous","C6L P96H",2
"lib1","SARS-CoV-2","GTATTTTCAGGCCTCA",5,40.27,6,-4.76,2,1.5,1.17,0.02,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","GTATTTTCCAGGTCCC",13,82.44,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N13V V32R V65E G86V N130F",5
"lib1","SARS-CoV-2","GTATTTTGAGGTAATC",6,39.11,6,-4.76,0.96,1.5,1.18,0.02,">1 nonsynonymous","L60K L95E S113C",3
"lib1","SARS-CoV-2","GTATTTTTTAGACGGT",3,3.53,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","GTCAAAAAAATACACG",1,17.24,10.15,-0.61,0.1,2.8,1.07,0,">1 nonsynonymous","L60D G155S",2
"lib1","SARS-CoV-2","GTCAAAAAAGCATGCA",2,8.7,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N64S F70K Q176R",3
"lib1","SARS-CoV-2","GTCAAAAAAGTGAAAA",6,83.79,10.74,-0.03,0.04,2.97,1.02,0,">1 nonsynonymous","S45E Q84M T201C",3
"lib1","SARS-CoV-2","GTCAAAAAGATTCTTC",9,110.2,10.79,0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAAAACAATATAGT",4,121.13,10.53,-0.23,0.05,2.87,1.05,0,">1 nonsynonymous","N40A K87L",2
"lib1","SARS-CoV-2","GTCAAAAGAACCTAAC",3,50.65,10.2,-0.57,0.08,2.79,1.1,0,">1 nonsynonymous","P7S L57G",2
"lib1","SARS-CoV-2","GTCAAAAGACGACTGG",4,39.9,9.17,-1.59,0.21,1.5,1.2,0.02,">1 nonsynonymous","G83I K132P K199T",3
"lib1","SARS-CoV-2","GTCAAAAGGAAGTGTG",1,82.17,10.22,-0.54,0.05,2.3,1,0,">1 nonsynonymous","A22C Y123W K132M",3
"lib1","SARS-CoV-2","GTCAAAATACCTGGTT",1,26.49,10.89,0.12,0.09,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAAAATAGCCGCTT",2,30.48,10.21,-0.55,0.06,2.92,1,0,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","GTCAAAATGTCTTACG",1,8.84,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","S43K L95G D98V V103S",4
"lib1","SARS-CoV-2","GTCAAAATTAGTAACG",3,19.39,10.78,0.02,0.13,2.9,1,0.01,">1 nonsynonymous","I2G D97G",2
"lib1","SARS-CoV-2","GTCAAAATTATCAACA",6,141.95,9.94,-0.83,0.04,2.87,1.03,0,">1 nonsynonymous","L5Q F44N",2
"lib1","SARS-CoV-2","GTCAAACACAACGTTT",1,10.01,10.85,0.09,0.15,2.83,1.13,0.01,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","GTCAAACCAAAGTCCA",2,24.53,6,-4.76,1.54,1.5,1.18,0.01,">1 nonsynonymous","F70V R179W S184K",3
"lib1","SARS-CoV-2","GTCAAACCAGTCAATC",4,28.39,6.38,-4.39,0.67,1.5,1.15,0.04,">1 nonsynonymous","Q84L Y93G I138L C150S G152N",5
"lib1","SARS-CoV-2","GTCAAACCCAACCCTT",1,34,7.9,-2.87,0.28,1.5,1.15,0.02,">1 nonsynonymous","A14I F99L Q163M G196C",4
"lib1","SARS-CoV-2","GTCAAACCTCAGCAAC",2,25.9,10.64,-0.13,0.15,2.48,1.07,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GTCAAACGAGGCTGGA",2,2.06,NA,NA,NA,NA,NA,NA,"stop","V11L A33H S41E C61G Y119*",5
"lib1","SARS-CoV-2","GTCAAACTAGAAACTG",2,16.67,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","G86L S113R",2
"lib1","SARS-CoV-2","GTCAAACTTGACCCTT",2,18.64,10.58,-0.19,0.15,2.84,1.1,0.02,">1 nonsynonymous","S36D D98E",2
"lib1","SARS-CoV-2","GTCAAAGACGTATATA",2,40.21,8.29,-2.48,0.3,1.77,1.26,0.04,">1 nonsynonymous","F99W S129P Y175C",3
"lib1","SARS-CoV-2","GTCAAAGCTTAAACTA",10,117.53,10.84,0.08,0.06,2.88,1.06,0,">1 nonsynonymous","S129G Q168W",2
"lib1","SARS-CoV-2","GTCAAAGGAAGTTGAC",4,63.53,8.82,-1.94,0.1,2.01,1.08,0,">1 nonsynonymous","T55D K87C D98V Y121S",4
"lib1","SARS-CoV-2","GTCAAAGGACTACTCT",8,0.49,NA,NA,NA,NA,NA,NA,"stop","C6Y L111H E141*",3
"lib1","SARS-CoV-2","GTCAAAGGCCTTCCGT",6,88.49,10.06,-0.7,0.1,2.44,1,0,">1 nonsynonymous","P7F S41L D90A",3
"lib1","SARS-CoV-2","GTCAAAGGCTAAGTTA",2,44.56,8.58,-2.19,0.12,1.88,1.09,0.01,">1 nonsynonymous","G83D G116A L122Y S139C T148D",5
"lib1","SARS-CoV-2","GTCAAAGGGAGGTAAA",4,21.13,10.49,-0.28,0.18,2.62,1.07,0.01,">1 nonsynonymous","Y50H N130T",2
"lib1","SARS-CoV-2","GTCAAAGTACTTCCAT",1,31.81,10.04,-0.72,0.08,2.78,1,0,">1 nonsynonymous","A33I K128I G174R T201A",4
"lib1","SARS-CoV-2","GTCAAAGTAGAAAGAA",6,23.21,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y143K F185N",2
"lib1","SARS-CoV-2","GTCAAAGTTTTTGAGC",2,39.76,10.77,0,0.09,2.94,1.06,0,">1 nonsynonymous","N24S Y39R T201R",3
"lib1","SARS-CoV-2","GTCAAATAAATATGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4F L57K G86E F134* N157D",5
"lib1","SARS-CoV-2","GTCAAATAACAATCCT",6,95.64,7.84,-2.92,0.38,1.5,1,0.05,">1 nonsynonymous","D112I S139M G152L",3
"lib1","SARS-CoV-2","GTCAAATAAGCTAATA",2,46.39,10.76,0,0.05,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCAAATACAACATAA",2,33.1,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","F12G L131W P169Y",3
"lib1","SARS-CoV-2","GTCAAATACAAGATTT",6,51.77,6,-4.76,0.84,1.5,1.15,0.01,">1 nonsynonymous","I2F I72G A81V D97W S184I",5
"lib1","SARS-CoV-2","GTCAAATACAGAATAG",1,17.05,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G83L F99Q",2
"lib1","SARS-CoV-2","GTCAAATATAAGACAG",1,76.57,10.76,0,0.07,2.8,1.06,0,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","GTCAAATCAGCACCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","R25* E76F R136L A145F",4
"lib1","SARS-CoV-2","GTCAAATCGTATGGAA",4,58.44,8.43,-2.33,0.09,2.29,1.13,0,">1 nonsynonymous","G74M K114V F126M T201M",4
"lib1","SARS-CoV-2","GTCAAATGCTATCTAC",6,16.44,6.89,-3.88,0.3,2.46,1.23,0.03,">1 nonsynonymous","G51Y C61D A89V",3
"lib1","SARS-CoV-2","GTCAAATTAAAACTTA",5,8.65,7.44,-3.32,0.44,1.5,1,0.06,">1 nonsynonymous","P96E W106F L131H I142N P149L V182A",6
"lib1","SARS-CoV-2","GTCAAATTTCTGAAAT",6,12.86,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L95W P96T Q163D",3
"lib1","SARS-CoV-2","GTCAACAAAATAAGCT",1,13.18,10.14,-0.63,0.14,2.26,1,0.01,"1 nonsynonymous","V181L",1
"lib1","SARS-CoV-2","GTCAACAATATCGCGT",8,121.33,10.74,-0.02,0.08,2.91,1.06,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","GTCAACACATATTAAA",4,19,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","A105R N118T A145F C150P",4
"lib1","SARS-CoV-2","GTCAACAGCGAATCGC",4,104.89,9.78,-0.98,0.05,2.78,1.04,0,">1 nonsynonymous","I142S E154S",2
"lib1","SARS-CoV-2","GTCAACAGCTCAAAAG",4,0.9,NA,NA,NA,NA,NA,NA,"stop","T46F N92* V173G",3
"lib1","SARS-CoV-2","GTCAACAGGGTTACAA",10,107.34,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2R S19T F62Q G86V P191R",5
"lib1","SARS-CoV-2","GTCAACATAATATGAA",7,22.13,6.75,-4.02,0.53,1.5,1.08,0.04,">1 nonsynonymous","N1L A22K I88C I104L C150S F167L",6
"lib1","SARS-CoV-2","GTCAACATACATCCAC",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A A89C E154Q",3
"lib1","SARS-CoV-2","GTCAACATAGTCTTAG",5,136.6,8.38,-2.38,0.13,2.58,1.11,0.01,">1 nonsynonymous","S113V Q144S",2
"lib1","SARS-CoV-2","GTCAACATATGTGGTT",2,15.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K48E T55L F99K G152D",4
"lib1","SARS-CoV-2","GTCAACATGAGTGTTA",3,32.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N107F L122Q F156S",3
"lib1","SARS-CoV-2","GTCAACATGTAAACTA",1,5.25,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","G116A S164C P177V",3
"lib1","SARS-CoV-2","GTCAACATTCACATTG",11,135.89,10.28,-0.48,0.04,2.92,1.03,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","GTCAACCATGCATCCA",8,116.57,10.78,0.01,0.05,2.91,1.05,0,">1 nonsynonymous","R27V P149G",2
"lib1","SARS-CoV-2","GTCAACCCTCTCCAGG",9,80.26,9.96,-0.81,0.11,2.25,1.06,0,">1 nonsynonymous","Y35H D98A V173I",3
"lib1","SARS-CoV-2","GTCAACCGTAGATTTG",1,6.19,6,-4.76,2,3,1.08,0,">1 nonsynonymous","F12N I28N V37I T148Y F156S",5
"lib1","SARS-CoV-2","GTCAACCTCTGGGGAC",4,18.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N F99K",2
"lib1","SARS-CoV-2","GTCAACGAACATGCTT",9,57.27,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","C6G V103T N151E N157R T170Q",5
"lib1","SARS-CoV-2","GTCAACGAATAAAGTA",1,14.58,10.73,-0.04,0.08,2.98,1.02,0,"1 nonsynonymous","K114S",1
"lib1","SARS-CoV-2","GTCAACGCGAAAAGAG",5,14.68,10.15,-0.61,0.15,2.12,1.07,0.01,">1 nonsynonymous","G9D A14N N30L G83Y",4
"lib1","SARS-CoV-2","GTCAACGCTCCCCAAT",6,63.8,10.43,-0.34,0.06,2.93,1.02,0,">1 nonsynonymous","N58I F62L",2
"lib1","SARS-CoV-2","GTCAACGTCTCATGGT",7,88.28,10.81,0.05,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAACTAAGATTCAA",3,42.1,10.12,-0.64,0.15,2.54,1.03,0.01,">1 nonsynonymous","I2R A67S",2
"lib1","SARS-CoV-2","GTCAACTACTATTATC",6,1.3,NA,NA,NA,NA,NA,NA,"stop","Y39* L95R",2
"lib1","SARS-CoV-2","GTCAACTAGATTTTAA",8,62.43,8.91,-1.85,0.13,1.93,1.09,0.01,">1 nonsynonymous","Y121S F134L S200L",3
"lib1","SARS-CoV-2","GTCAACTTAACCACAA",6,78.14,7.9,-2.87,0.37,1.5,1,0.04,">1 nonsynonymous","C31N A105M L122W G166V",4
"lib1","SARS-CoV-2","GTCAACTTTAAACAAT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","N118* Y121V",2
"lib1","SARS-CoV-2","GTCAAGACTACATGAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","W106* P133T C150L",3
"lib1","SARS-CoV-2","GTCAAGAGAAACGAAC",2,28.36,10.06,-0.7,0.11,2.77,1.02,0,">1 nonsynonymous","Y35F W106S V115F",3
"lib1","SARS-CoV-2","GTCAAGATCTAAGAAA",4,49.79,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12Y K48R Y121N G152L Y159C",5
"lib1","SARS-CoV-2","GTCAAGATGTTTTTCC",8,105.89,10.82,0.06,0.06,2.91,1.03,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","GTCAAGATTGTCTAGG",5,17.25,6,-4.76,1.09,3,1.19,0,">1 nonsynonymous","Y93R N157T",2
"lib1","SARS-CoV-2","GTCAAGCAAAGGAGCA",1,743.7,8.76,-2.01,0.08,2.19,1.11,0,">1 nonsynonymous","N1T D75E G146Y",3
"lib1","SARS-CoV-2","GTCAAGCAGTCAAAAA",2,29.78,6,-4.76,0.74,1.59,1.13,0.01,">1 nonsynonymous","L38C D59A G83L I104T G196A",5
"lib1","SARS-CoV-2","GTCAAGCATTGTCTAA",1,52.19,9.79,-0.97,0.07,2.21,1.02,0,">1 nonsynonymous","V32L F44C N151A",3
"lib1","SARS-CoV-2","GTCAAGCCTAAAATCA",3,11.78,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F47L G86I S184P",3
"lib1","SARS-CoV-2","GTCAAGCCTTCAATGG",1,22.6,10.79,0.03,0.06,2.89,1.09,0,"1 nonsynonymous","N64R",1
"lib1","SARS-CoV-2","GTCAAGCGAAAATAAT",14,209.68,10.53,-0.24,0.05,2.88,1.03,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","GTCAAGCGCCACTCTC",4,88.21,10.65,-0.12,0.05,2.94,1,0,">1 nonsynonymous","I2S F44I",2
"lib1","SARS-CoV-2","GTCAAGCGTGTCGCCA",1,9.14,10.79,0.03,0.1,2.89,1.03,0.01,"1 nonsynonymous","S164H",1
"lib1","SARS-CoV-2","GTCAAGGAAACGTACG",8,108.18,10.73,-0.04,0.03,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAAGGCTCTTTTTA",11,76.44,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V37G R179F",2
"lib1","SARS-CoV-2","GTCAAGGGTCTAACAG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L95M R127* T148L",3
"lib1","SARS-CoV-2","GTCAAGTACAACGAAC",7,45.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55F S69W R127L",3
"lib1","SARS-CoV-2","GTCAAGTACCTAGGAT",8,135.17,10.18,-0.58,0.05,2.74,1,0,">1 nonsynonymous","N13E S41F K48L",3
"lib1","SARS-CoV-2","GTCAAGTTAGGATCAA",12,80.8,6.64,-4.13,0.31,1.5,1.18,0.01,">1 nonsynonymous","T55V A89W",2
"lib1","SARS-CoV-2","GTCAATAACATGAATG",2,42.71,8.67,-2.09,0.1,2.8,1.1,0,">1 nonsynonymous","S41K R73A T140E P149I",4
"lib1","SARS-CoV-2","GTCAATAACCTTTATC",1,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46L Q84A N110S K199D",4
"lib1","SARS-CoV-2","GTCAATAATCAAGTTA",2,50.14,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L38K F47C N64F Y91L",4
"lib1","SARS-CoV-2","GTCAATAATCACGCAT",2,40.1,6.9,-3.86,0.21,1.5,1.05,0.01,">1 nonsynonymous","S45C P96S Y119L",3
"lib1","SARS-CoV-2","GTCAATACTCCCCGAA",1,19.69,7.95,-2.81,0.24,1.5,1.17,0.04,">1 nonsynonymous","V153H P177G T201R",3
"lib1","SARS-CoV-2","GTCAATACTTGGCTCC",1,18.76,10.7,-0.07,0.04,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAATATTAAAAAAC",1,20.49,10.69,-0.08,0.13,2.85,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTCAATCCTAAACCAC",8,60.11,9.95,-0.82,0.11,2.49,1.01,0,">1 nonsynonymous","N4Y N58M E141I",3
"lib1","SARS-CoV-2","GTCAATCTGTCGTAAT",5,62.74,6.29,-4.47,0.32,1.5,1.13,0.01,">1 nonsynonymous","K87S N107T K128N G174Q",4
"lib1","SARS-CoV-2","GTCAATGAAAATAATA",9,49.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S I28D",2
"lib1","SARS-CoV-2","GTCAATGAAGGCGGTT",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T K128W",2
"lib1","SARS-CoV-2","GTCAATGAGCCCGCAG",6,97.24,10.83,0.07,0.09,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAATGATACATAGT",2,5.49,9.9,-0.87,0.21,1.88,1,0.01,">1 nonsynonymous","V37Y S139I S184Q",3
"lib1","SARS-CoV-2","GTCAATGCAATAATGG",9,132.8,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A105G G155K G172N",3
"lib1","SARS-CoV-2","GTCAATGCCCGACAAG",5,89.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N58L Y93G K132L",3
"lib1","SARS-CoV-2","GTCAATGCGAAACAAT",1,25.2,9.99,-0.77,0.18,2.1,1,0.01,">1 nonsynonymous","T63W G83E",2
"lib1","SARS-CoV-2","GTCAATGTACCTATAC",2,14.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19R C61H E76G F99V L122H N130M",6
"lib1","SARS-CoV-2","GTCAATTCAACACGCA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V T46N G146L",3
"lib1","SARS-CoV-2","GTCAATTCCTAGTGAA",3,6.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q T100S",2
"lib1","SARS-CoV-2","GTCAATTCGGCACAAA",3,33.64,6.01,-4.75,1.64,1.5,1.18,0.05,">1 nonsynonymous","G86W E154L Q176S",3
"lib1","SARS-CoV-2","GTCAATTGAGTGTCCA",2,24.38,8.6,-2.17,0.23,1.5,1.2,0.02,">1 nonsynonymous","G9L T15L R127S",3
"lib1","SARS-CoV-2","GTCAATTGCCAAAATT",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N Y91K L131A I142K T201R",5
"lib1","SARS-CoV-2","GTCAATTTAATGCTTA",1,10.01,10.79,0.03,0.1,2.82,1.09,0,">1 nonsynonymous","G9Q S200L",2
"lib1","SARS-CoV-2","GTCACAAAAAATGGTT",3,82.75,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A18V V37L L131I C150N",4
"lib1","SARS-CoV-2","GTCACAAAACCAGGTT",1,8.06,6,-4.76,0.88,1.5,1.07,0,">1 nonsynonymous","A14H N120S L131E S184Y",4
"lib1","SARS-CoV-2","GTCACAAAACTAAAAG",3,244.45,10.63,-0.13,0.04,2.92,1.04,0,">1 nonsynonymous","N64A T85V T140S",3
"lib1","SARS-CoV-2","GTCACAAAAGAGGCAA",3,60.84,8.18,-2.58,0.24,1.59,1.1,0.02,">1 nonsynonymous","N107L Q176R L187T",3
"lib1","SARS-CoV-2","GTCACAAACTAGAGAA",5,67.83,10.06,-0.7,0.06,2.87,1,0,">1 nonsynonymous","A14S F44I F160P",3
"lib1","SARS-CoV-2","GTCACAAAGCCACACT",2,32.94,6.62,-4.15,0.36,1.5,1.09,0.02,">1 nonsynonymous","D59I K87M F99R S129A",4
"lib1","SARS-CoV-2","GTCACAAATAAGTAAG",8,187.2,10.7,-0.07,0.03,2.94,1.01,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","GTCACAAATTGTAGGC",2,17,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A89E Y121C",2
"lib1","SARS-CoV-2","GTCACAACCAAAAAGT",1,32.85,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D90F P177N",2
"lib1","SARS-CoV-2","GTCACAACCGACGGTC",6,50.26,9.04,-1.73,0.22,1.52,1.16,0.02,">1 nonsynonymous","N107K I138L Y178I",3
"lib1","SARS-CoV-2","GTCACAACGAGTTAGG",3,25.33,9.06,-1.7,0.22,1.84,1.15,0.03,">1 nonsynonymous","A67Y P169V",2
"lib1","SARS-CoV-2","GTCACAACTGCACATG",6,12.57,7.1,-3.66,0.44,1.5,1.16,0.06,">1 nonsynonymous","A42I Q144T C158S P169A",4
"lib1","SARS-CoV-2","GTCACAAGGACAAATG",5,0.48,NA,NA,NA,NA,NA,NA,"stop","C6V K94N I104M F156*",4
"lib1","SARS-CoV-2","GTCACAAGGTCACACG",15,106.51,10.26,-0.51,0.04,2.81,1.02,0,">1 nonsynonymous","N4L T15L Y39L",3
"lib1","SARS-CoV-2","GTCACAATAACTCTGT",2,30.75,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G51K V103I R124C Y165T",4
"lib1","SARS-CoV-2","GTCACACATACCTATC",8,36.45,7.97,-2.79,0.35,1.5,1,0.05,">1 nonsynonymous","T15F D34R P82L A105T T201Y",5
"lib1","SARS-CoV-2","GTCACACGTGGATGAG",1,19.29,10.3,-0.47,0.12,3,1.03,0.01,">1 nonsynonymous","T3S V37A D98Q T170S",4
"lib1","SARS-CoV-2","GTCACAGAAGATGATT",1,9.71,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G51T F62T R179M",3
"lib1","SARS-CoV-2","GTCACAGGGATGGGGG",9,69,10.69,-0.08,0.05,2.95,1.01,0,"1 nonsynonymous","N1G",1
"lib1","SARS-CoV-2","GTCACAGGGGTACTTA",2,29.01,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A67T K94W Y121R K128N G146S",5
"lib1","SARS-CoV-2","GTCACAGTTACAAAAC",3,15.3,8,-2.77,0.27,1.55,1.12,0.02,">1 nonsynonymous","T3P F62E Y121K",3
"lib1","SARS-CoV-2","GTCACATAGGCCTCGT",2,29.93,8.91,-1.86,0.44,1.5,1,0.07,">1 nonsynonymous","I2M Q84P D90N V103I T140R",5
"lib1","SARS-CoV-2","GTCACATCCCGCCGTA",1,74.86,10.74,-0.02,0.07,2.88,1.08,0,"1 nonsynonymous","P149D",1
"lib1","SARS-CoV-2","GTCACATCGTACACCA",5,105.17,9.62,-1.14,0.1,2.09,1.11,0,">1 nonsynonymous","K56R K94V E154P",3
"lib1","SARS-CoV-2","GTCACATGGTATGTTA",5,12.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F44M A89R I104M N130D E141D",5
"lib1","SARS-CoV-2","GTCACCAATTCGCAAC",4,26.82,10.75,-0.02,0.09,2.91,1.05,0.01,"1 nonsynonymous","V37C",1
"lib1","SARS-CoV-2","GTCACCATAAATAATC",9,155.56,10.54,-0.22,0.04,2.9,1.04,0,">1 nonsynonymous","A105T N110S",2
"lib1","SARS-CoV-2","GTCACCATAATAGGTA",2,50.54,10.68,-0.08,0.04,2.91,1.05,0,">1 nonsynonymous","S36R V153S",2
"lib1","SARS-CoV-2","GTCACCATACTCTAAG",1,18.31,8.78,-1.98,0.2,2.16,1.05,0.02,">1 nonsynonymous","A14R Q176L",2
"lib1","SARS-CoV-2","GTCACCATTACACCAC",2,14.19,10.63,-0.13,0.09,2.84,1.05,0,">1 nonsynonymous","N40Y T140H",2
"lib1","SARS-CoV-2","GTCACCCCCCTATATA",1,37.28,10.18,-0.58,0.08,2.84,1,0,">1 nonsynonymous","N1W S29R K87R A190Y",4
"lib1","SARS-CoV-2","GTCACCCCCCTGTGAA",2,33.88,8.4,-2.36,0.1,1.93,1.09,0,">1 nonsynonymous","S113K G166R",2
"lib1","SARS-CoV-2","GTCACCCCTCATTCAT",1,14.55,8.21,-2.55,0.39,1.5,1.12,0.06,">1 nonsynonymous","C49I Y119T F160W",3
"lib1","SARS-CoV-2","GTCACCCCTCGAAATG",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P K114D P169G",3
"lib1","SARS-CoV-2","GTCACCCTAAGAACGG",3,25.96,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N92V V180M",2
"lib1","SARS-CoV-2","GTCACCCTACTACCTA",4,49.58,9.65,-1.12,0.19,1.54,1.09,0.01,">1 nonsynonymous","N1M T63L Y91V",3
"lib1","SARS-CoV-2","GTCACCCTCACACCGC",6,298.27,10.63,-0.13,0.03,2.91,1.05,0,">1 nonsynonymous","I2L Y178N",2
"lib1","SARS-CoV-2","GTCACCGAGTCCCAGT",3,32.54,8.88,-1.89,0.11,2.82,1.18,0,">1 nonsynonymous","R73S K87W",2
"lib1","SARS-CoV-2","GTCACCGCACCATACA",4,9.3,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V11F D68W D97L",3
"lib1","SARS-CoV-2","GTCACCGTTCGCAGTA",2,113.85,10.7,-0.07,0.06,2.91,1.05,0,">1 nonsynonymous","S53P T201M",2
"lib1","SARS-CoV-2","GTCACCTATGAGTAGA",2,10.67,6.68,-4.08,0.25,2.16,1.09,0.01,">1 nonsynonymous","F8A W106P P191T G196W",4
"lib1","SARS-CoV-2","GTCACCTCCTTTACAT",6,67.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41T T46P T55K L60P G146V",5
"lib1","SARS-CoV-2","GTCACCTTCTAGTTCC",5,19.23,10.86,0.1,0.1,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCACGAAACACCTAG",11,80.73,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","G9T A67I I88Y",3
"lib1","SARS-CoV-2","GTCACGAAAGACATAC",2,36.09,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K56P K94R P177I",3
"lib1","SARS-CoV-2","GTCACGAATACCAATA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G K87M K94G F160N P197Q",5
"lib1","SARS-CoV-2","GTCACGAATGTAGGTG",4,149.02,10.73,-0.04,0.04,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCACGACACACCCTT",7,186.77,8.28,-2.49,0.12,2.58,1.07,0.01,"1 nonsynonymous","G146P",1
"lib1","SARS-CoV-2","GTCACGACCATCCGCT",13,312.76,10.83,0.07,0.07,2.91,1.05,0,"1 nonsynonymous","L122A",1
"lib1","SARS-CoV-2","GTCACGACGTACATGT",7,58.88,10.74,-0.03,0.08,2.89,1.04,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","GTCACGAGTAAATCCG",2,22.62,8.49,-2.27,0.11,2.6,1.02,0.01,">1 nonsynonymous","G9K K48C I142N V153S",4
"lib1","SARS-CoV-2","GTCACGATAACCACGC",4,1.55,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib1","SARS-CoV-2","GTCACGGAACTACACA",7,0,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","GTCACGGCATAATAGG",1,3.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80L",1
"lib1","SARS-CoV-2","GTCACGGGCGAAATTA",8,50.4,8.52,-2.25,0.21,1.79,1.18,0.02,">1 nonsynonymous","D59V N107S",2
"lib1","SARS-CoV-2","GTCACGTACGTTGGGG",8,1.89,NA,NA,NA,NA,NA,NA,"stop","E10* A42T D90Y S113* I142K C150F",6
"lib1","SARS-CoV-2","GTCACGTATGTTTCAC",7,8.76,NA,NA,NA,NA,NA,NA,"stop","A33I G86* Y91H",3
"lib1","SARS-CoV-2","GTCACTAAAATTCCGA",3,29.34,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","L5D N24G C49R A67P E141F F160I",6
"lib1","SARS-CoV-2","GTCACTAAATGGAGAT",3,25.18,10.76,-0.01,0.17,2.68,1.08,0.01,">1 nonsynonymous","T55G A81S L122S",3
"lib1","SARS-CoV-2","GTCACTAACACTGACA",12,8.19,NA,NA,NA,NA,NA,NA,"stop","L5W S19V T46G T85S G152D N157M T201*",7
"lib1","SARS-CoV-2","GTCACTAAGAACGAAT",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30P S45G G83I D90V D97H Y121G",6
"lib1","SARS-CoV-2","GTCACTACAAGAAAGT",5,30.63,10.66,-0.11,0.06,2.82,1.11,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","GTCACTACACGTAGTA",3,37.37,6,-4.76,2,3,1.14,0,">1 nonsynonymous","V11F D90G D97G Q176R",4
"lib1","SARS-CoV-2","GTCACTATTATTACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29P V37L D90W",3
"lib1","SARS-CoV-2","GTCACTCGTAATTTCC",3,23.34,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L95S N107R I138G G146T",4
"lib1","SARS-CoV-2","GTCACTGATTCCCCCA",1,6.12,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A22K K56W L95D G152N",4
"lib1","SARS-CoV-2","GTCACTGCACCGGTCA",2,11.85,6,-4.76,2,1.5,1.46,0.06,">1 nonsynonymous","T85Y S147C N171K",3
"lib1","SARS-CoV-2","GTCACTTAGAGTAACA",7,212.45,9.19,-1.58,0.05,2.81,1.1,0,">1 nonsynonymous","F12M V37F G146E",3
"lib1","SARS-CoV-2","GTCACTTCGCCATAGA",3,21.8,6,-4.76,2,1.55,1.13,0.01,">1 nonsynonymous","F12R T85A Y93I",3
"lib1","SARS-CoV-2","GTCACTTGCCACTCTA",11,82.45,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12H A14F F44S L131K I138L",5
"lib1","SARS-CoV-2","GTCACTTTAACAAATC",2,42.41,10.76,-0.01,0.07,2.92,1.07,0,"1 nonsynonymous","I72L",1
"lib1","SARS-CoV-2","GTCAGAAAATCCCTGC",6,176.98,6.06,-4.7,0.78,1.5,1.22,0.01,">1 nonsynonymous","S29L Y50V",2
"lib1","SARS-CoV-2","GTCAGAAACAGCCTTC",8,1.3,NA,NA,NA,NA,NA,NA,"stop","N13I F44G W106P L131*",4
"lib1","SARS-CoV-2","GTCAGAAATATAGATA",8,112.1,10.8,0.04,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCAGAAGTTGCAAAC",2,26.64,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","Y39D K132I F167T",3
"lib1","SARS-CoV-2","GTCAGAATTAGGTTAG",3,69.92,6,-4.76,1.88,1.5,1.12,0.01,">1 nonsynonymous","R16L A22S Y50P G146V",4
"lib1","SARS-CoV-2","GTCAGACACAAAAACA",7,69.07,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G83M N107G L122V L131S",4
"lib1","SARS-CoV-2","GTCAGACCAAGTAATC",15,147.34,7.52,-3.24,0.34,1.5,1.21,0.03,">1 nonsynonymous","R16K A105F K128Y S184M",4
"lib1","SARS-CoV-2","GTCAGACCCAGACAAA",2,17.29,10.77,0.01,0.07,2.85,1.12,0,"1 nonsynonymous","Q163Y",1
"lib1","SARS-CoV-2","GTCAGACGTAAGCATA",3,33.6,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N4R N107V R127V Q144F L183T",5
"lib1","SARS-CoV-2","GTCAGAGAATTTGATG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","G117* T140*",2
"lib1","SARS-CoV-2","GTCAGAGACGTTAAAG",1,40.95,10.64,-0.12,0.07,2.97,1,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","GTCAGAGAGACAGGAG",1,40.4,10.22,-0.54,0.06,2.73,1.02,0,">1 nonsynonymous","K26A S36F",2
"lib1","SARS-CoV-2","GTCAGAGCACAACACT",1,39.51,10.7,-0.06,0.05,2.94,1.05,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","GTCAGATAATTACATG",5,94.91,10.77,0.01,0.09,2.89,1.07,0,"1 nonsynonymous","A192T",1
"lib1","SARS-CoV-2","GTCAGATAGCCATAGG",2,35.53,7.09,-3.67,0.32,1.5,1.16,0.02,"1 nonsynonymous","L131G",1
"lib1","SARS-CoV-2","GTCAGATGACCTAAGT",6,0.78,NA,NA,NA,NA,NA,NA,"stop","L122* T140D",2
"lib1","SARS-CoV-2","GTCAGATTGTCCAAAG",2,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89T G155V",2
"lib1","SARS-CoV-2","GTCAGCAAATACCTGA",7,0.21,NA,NA,NA,NA,NA,NA,"stop","N13* D59E G146L A190S",4
"lib1","SARS-CoV-2","GTCAGCTAAAAAGCTA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C Y39S G86T F99T S113G",5
"lib1","SARS-CoV-2","GTCAGCTACAATTAAG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","F12* V37F K48A I88N T100Y",5
"lib1","SARS-CoV-2","GTCAGCTTAATTGATG",4,0.41,NA,NA,NA,NA,NA,NA,"stop","V77M K128* F160K",3
"lib1","SARS-CoV-2","GTCAGGACAAGCAAAA",3,1.7,NA,NA,NA,NA,NA,NA,"stop","V71* E135R",2
"lib1","SARS-CoV-2","GTCAGGCACCGAAAAT",8,28.49,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","I104Y R124T",2
"lib1","SARS-CoV-2","GTCAGGCACGAGCCTA",6,48.37,9.48,-1.29,0.11,2.47,1.06,0,">1 nonsynonymous","G9I T85D N130R G174R K199N",5
"lib1","SARS-CoV-2","GTCAGGGAAATATAGA",16,126.9,6,-4.76,1.43,1.5,1.32,0.04,">1 nonsynonymous","L57M D68S D97Q",3
"lib1","SARS-CoV-2","GTCAGGGATAACCGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14W D98R A105* P149T",4
"lib1","SARS-CoV-2","GTCAGGGCTCCTTAAG",1,41.64,10.59,-0.18,0.04,2.95,1.01,0,"1 nonsynonymous","L162V",1
"lib1","SARS-CoV-2","GTCAGGGGCCATGGGG",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144M F160P G166A",3
"lib1","SARS-CoV-2","GTCAGGGGTTTAGCCT",8,206.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1Y G9T C61G L122V G172Y",5
"lib1","SARS-CoV-2","GTCAGGTATGAATCTA",10,105,6,-4.76,1.73,1.5,1.19,0.01,">1 nonsynonymous","V52R K87E L95M",3
"lib1","SARS-CoV-2","GTCAGTATTCTACCAT",2,28.31,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","A14S A105N D112E F156R R179S",5
"lib1","SARS-CoV-2","GTCAGTCCAATCCGCA",2,11.15,10.29,-0.48,0.06,3,1,0,">1 nonsynonymous","C6N A18P P149S Q168S",4
"lib1","SARS-CoV-2","GTCAGTCCCGCTGTGT",9,41.2,6.38,-4.39,0.55,1.5,1.13,0.02,">1 nonsynonymous","N64D D97V W106V E154Y",4
"lib1","SARS-CoV-2","GTCAGTCGAATATACG",5,105.93,9.47,-1.29,0.1,2.65,1.12,0,">1 nonsynonymous","K114E S129L T170A",3
"lib1","SARS-CoV-2","GTCAGTCGACATTCGT",2,11.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L Y121H",2
"lib1","SARS-CoV-2","GTCAGTCGGCTGCGTT",5,49.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58S F99V G166H",3
"lib1","SARS-CoV-2","GTCAGTCTAATCTAAG",1,54.54,10.25,-0.51,0.04,2.92,1,0,"1 nonsynonymous","N107A",1
"lib1","SARS-CoV-2","GTCAGTGAAGAATAAA",5,28.35,10.75,-0.02,0.08,2.97,1,0,"1 nonsynonymous","S147F",1
"lib1","SARS-CoV-2","GTCAGTGATGCAAAAT",8,123.26,10.85,0.08,0.08,2.88,1.06,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","GTCAGTGCATGGATTT",5,45.96,6,-4.76,1,3,1.14,0.01,">1 nonsynonymous","D90N N110T R127Q P149L Y175C P197A",6
"lib1","SARS-CoV-2","GTCAGTGGATTTCCTA",1,22.32,10.52,-0.25,0.07,2.88,1,0,">1 nonsynonymous","D97K G155M",2
"lib1","SARS-CoV-2","GTCAGTGTCTCCTCAA",1,24.3,10.07,-0.69,0.11,1.95,1.06,0,">1 nonsynonymous","V65R L122R F167Y A190T",4
"lib1","SARS-CoV-2","GTCAGTTAAACCTTAA",2,19,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V103Q R127G",2
"lib1","SARS-CoV-2","GTCAGTTCACTACCCC",4,26.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L38R F44T G86S",3
"lib1","SARS-CoV-2","GTCATAAAAATTGCGA",10,85.82,6,-4.76,0.55,1.5,1.12,0.01,">1 nonsynonymous","F8P N120R C150K",3
"lib1","SARS-CoV-2","GTCATAAAACCGACAT",3,41.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6L V20M A81V",3
"lib1","SARS-CoV-2","GTCATAAAATTGAGCA",8,75.76,6.53,-4.24,0.53,1.5,1.15,0.04,">1 nonsynonymous","V20C K94S F99L",3
"lib1","SARS-CoV-2","GTCATAAACGTGGAGA",3,26.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12K A67N G83C L122D T148M T201R",6
"lib1","SARS-CoV-2","GTCATAAAGTTTCAAT",3,38.54,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F17E G51Y D59V T100P F156H N171L",6
"lib1","SARS-CoV-2","GTCATAACTCCCACCG",15,161.68,6.15,-4.62,0.68,1.5,1.17,0.01,">1 nonsynonymous","A18L N64R A89S G174C",4
"lib1","SARS-CoV-2","GTCATAAGAGATTTAG",1,14.61,10.57,-0.2,0.12,2.86,1.12,0.01,">1 nonsynonymous","N151L S200L",2
"lib1","SARS-CoV-2","GTCATAAGATCTGAAG",1,7.56,10.68,-0.08,0.09,2.98,1,0,">1 nonsynonymous","V37A N58L",2
"lib1","SARS-CoV-2","GTCATAAGTAAAAATT",2,87.88,10.77,0,0.06,2.85,1.07,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","GTCATAAGTAAGCGCT",1,49.05,10.13,-0.64,0.06,2.81,1.04,0,">1 nonsynonymous","C6T N40H",2
"lib1","SARS-CoV-2","GTCATAAGTCCCAAGG",1,27.87,9.32,-1.45,0.12,2.43,1.1,0.01,">1 nonsynonymous","L38A F156R",2
"lib1","SARS-CoV-2","GTCATAAGTCTTTTCT",2,23.58,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R73G F126Y R136Q G152P S184F",5
"lib1","SARS-CoV-2","GTCATAAGTTTATCCA",6,33.54,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D112W P133M Y178P",3
"lib1","SARS-CoV-2","GTCATAATGCAACCAT",4,63.44,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C61H Y143G T170F T201Q",4
"lib1","SARS-CoV-2","GTCATACAAATCATGT",3,1.68,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib1","SARS-CoV-2","GTCATACACCCTATAA",4,71.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19V G83A N120M G174L",4
"lib1","SARS-CoV-2","GTCATACATATTTGTG",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y I28L D34R G51Y",4
"lib1","SARS-CoV-2","GTCATACATTATAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","T15L S45* G166C",3
"lib1","SARS-CoV-2","GTCATACCACCCTCAA",2,51.2,8.1,-2.67,0.32,1.5,1.09,0.04,">1 nonsynonymous","D90L L131H",2
"lib1","SARS-CoV-2","GTCATACCACTGTATT",1,0.13,NA,NA,NA,NA,NA,NA,"stop","S53F K56M I80* Q84T Y121R S129L R136M V153F",8
"lib1","SARS-CoV-2","GTCATACCCCGTTGGG",6,95.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38T G86I",2
"lib1","SARS-CoV-2","GTCATACTAATCATAC",3,113.32,6,-4.76,1.24,1.5,1.21,0.02,">1 nonsynonymous","L5S R25L F167K Q176T",4
"lib1","SARS-CoV-2","GTCATACTAGTCAACC",6,81.76,10.1,-0.66,0.04,2.96,1,0,">1 nonsynonymous","E154L T201S",2
"lib1","SARS-CoV-2","GTCATAGAAACCCTAA",3,50.62,7.41,-3.35,0.15,1.5,1.1,0.01,">1 nonsynonymous","G86M F126L L187R",3
"lib1","SARS-CoV-2","GTCATAGAAATATGAA",9,39.64,8.24,-2.53,0.31,1.5,1.22,0.04,">1 nonsynonymous","Y66M L162R A190S",3
"lib1","SARS-CoV-2","GTCATAGAACTTTTAA",8,127.16,6,-4.76,1.92,1.5,1.18,0.01,">1 nonsynonymous","T3L Y35L P177K",3
"lib1","SARS-CoV-2","GTCATAGAATGAATAA",1,6.18,6,-4.76,2,3,1.08,0,">1 nonsynonymous","K87M L162W V180M",3
"lib1","SARS-CoV-2","GTCATAGCCTAAATAT",2,12.45,10.84,0.08,0.22,2.57,1.07,0.01,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","GTCATAGCTGGAACAA",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22K D59Y G86N P161D",4
"lib1","SARS-CoV-2","GTCATAGCTTGATAGT",1,10.22,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S69G K94G N157S",3
"lib1","SARS-CoV-2","GTCATAGTGAAAAAAT",3,60.69,10.29,-0.47,0.08,2.68,1.04,0,">1 nonsynonymous","L5Y T100S K128G G152S",4
"lib1","SARS-CoV-2","GTCATAGTGAGGTATA",5,23.21,6.09,-4.68,0.6,1.5,1.12,0.01,">1 nonsynonymous","C6S F12N S45C R124L C158D",5
"lib1","SARS-CoV-2","GTCATATAAAGTGTAC",7,135.39,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R25S Y50S T55F",3
"lib1","SARS-CoV-2","GTCATATCGCGAACCA",8,95.34,9.75,-1.01,0.11,1.83,1.07,0.01,"1 nonsynonymous","Y66G",1
"lib1","SARS-CoV-2","GTCATATGCCACAAAA",2,108.89,8.38,-2.39,0.15,2.5,1.16,0.01,">1 nonsynonymous","L60S E141G N157H",3
"lib1","SARS-CoV-2","GTCATATGTATTCATT",6,53.72,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","E10S W106G G172N",3
"lib1","SARS-CoV-2","GTCATATTACAAAGGG",11,52.51,6,-4.76,2,3,1.21,0,">1 nonsynonymous","D98G G116L Y165G",3
"lib1","SARS-CoV-2","GTCATATTATCAGTTT",4,162.6,8.52,-2.24,0.11,2.61,1.1,0,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","GTCATATTTCTTAATG",7,0.84,NA,NA,NA,NA,NA,NA,"stop","I28R Y119*",2
"lib1","SARS-CoV-2","GTCATCAAACAAAAAT",8,110.12,10.05,-0.72,0.12,2.2,1.03,0,">1 nonsynonymous","F17S F134Y",2
"lib1","SARS-CoV-2","GTCATCAATATCAAAG",5,506.78,10.55,-0.22,0.03,2.95,1.01,0,"1 nonsynonymous","S36F",1
"lib1","SARS-CoV-2","GTCATCAATATGATGC",5,31.04,7.8,-2.96,0.43,1.5,1,0.07,">1 nonsynonymous","S53Y V103E P169L",3
"lib1","SARS-CoV-2","GTCATCACACCCTCAT",1,43.26,10.76,-0.01,0.07,2.91,1.05,0,">1 nonsynonymous","A33W N64D A89S",3
"lib1","SARS-CoV-2","GTCATCACCCCGCTAG",4,19.81,6.78,-3.99,0.21,1.5,1.09,0.01,">1 nonsynonymous","G9A K48L C158A",3
"lib1","SARS-CoV-2","GTCATCACTCGTACAT",2,44.57,10.66,-0.1,0.07,2.87,1.06,0,">1 nonsynonymous","N1K A18T A33F T55E",4
"lib1","SARS-CoV-2","GTCATCAGAGTTTGCG",4,0.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35W",1
"lib1","SARS-CoV-2","GTCATCATTTGTCATG",1,10.27,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N58R Y93P N157D",3
"lib1","SARS-CoV-2","GTCATCCATGATCATA",6,48.48,10.65,-0.11,0.07,2.86,1.1,0,">1 nonsynonymous","N4H N40R",2
"lib1","SARS-CoV-2","GTCATCCCCTACAATA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","S41* D98H A105S L122M F160L",5
"lib1","SARS-CoV-2","GTCATCCCTCCCCAGC",9,45.88,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","G9W F44P D90A W106G",4
"lib1","SARS-CoV-2","GTCATCCTGGCATGAA",1,18.94,10.83,0.07,0.07,2.98,1,0,"1 nonsynonymous","F62Y",1
"lib1","SARS-CoV-2","GTCATCGAAGTTAAAA",2,17.17,10.77,0,0.07,2.94,1,0,"1 nonsynonymous","N58D",1
"lib1","SARS-CoV-2","GTCATCGTGATACACC",2,35.93,10.75,-0.01,0.09,2.85,1.09,0,">1 nonsynonymous","P54F T201Q",2
"lib1","SARS-CoV-2","GTCATCGTTGATTGCT",6,2.15,NA,NA,NA,NA,NA,NA,"stop","C6V A14L K198*",3
"lib1","SARS-CoV-2","GTCATCTAAACGATGT",4,36.25,10.64,-0.12,0.15,2.87,1.13,0.01,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","GTCATCTATCATACAG",3,22.96,9.58,-1.18,0.26,1.66,1.22,0.02,">1 nonsynonymous","I2K G83K L95T",3
"lib1","SARS-CoV-2","GTCATCTGCTTCGGAT",2,41.48,10.9,0.13,0.1,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCATGAAAACATATA",5,146.54,10.71,-0.05,0.07,2.92,1.05,0,">1 nonsynonymous","F8L S129N",2
"lib1","SARS-CoV-2","GTCATGAAAACCTACG",4,75.02,6,-4.76,2,3,1.24,0,">1 nonsynonymous","D68L E141N L187M",3
"lib1","SARS-CoV-2","GTCATGAAATTTTAAA",6,188.08,10.22,-0.54,0.05,2.95,1,0,">1 nonsynonymous","N1T P169Q",2
"lib1","SARS-CoV-2","GTCATGAACCTTCGAA",7,112.84,10.78,0.01,0.07,2.87,1.06,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","GTCATGAACGAGGTTC",2,31.06,10.06,-0.7,0.11,2.82,1,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","GTCATGAATCGAAAAG",11,57.23,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","Y50L G146T F156T T170R",4
"lib1","SARS-CoV-2","GTCATGACGAAAAACT",2,30.5,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A105W Y121M G152L",3
"lib1","SARS-CoV-2","GTCATGAGCTTGTTGT",5,131.04,10.66,-0.11,0.07,2.88,1.06,0,">1 nonsynonymous","S36L L122V",2
"lib1","SARS-CoV-2","GTCATGATGTGTTATA",3,0.54,NA,NA,NA,NA,NA,NA,"stop","G51I G86V K94Y T100* N107R V115G I142T F156V",8
"lib1","SARS-CoV-2","GTCATGCACTTGCGCA",1,1.94,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTCATGCCTGCGACAA",2,19.9,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","V77K A89T Y121E L183C",4
"lib1","SARS-CoV-2","GTCATGGACCGTCTGG",2,19.15,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","Y35L V71E R124F L131I",4
"lib1","SARS-CoV-2","GTCATGGATAAAACAT",6,36.68,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G86V N107E G152K L162E V173Y",5
"lib1","SARS-CoV-2","GTCATGGCTGTCAATC",5,81.17,9.69,-1.07,0.05,2.88,1.06,0,">1 nonsynonymous","L5Y G166N G174R",3
"lib1","SARS-CoV-2","GTCATTAAGAACATCG",5,62.41,6,-4.76,1.77,1.5,1.19,0.02,">1 nonsynonymous","P7W D97K Q163W Q176W",4
"lib1","SARS-CoV-2","GTCATTAATTATAAAT",6,38.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y93K V115T",2
"lib1","SARS-CoV-2","GTCATTAGACTATATA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","G9L D34* A67N N107I R127S",5
"lib1","SARS-CoV-2","GTCATTAGGTCAAGTA",11,2.71,NA,NA,NA,NA,NA,NA,"stop","N4C T46P L122W Y143*",4
"lib1","SARS-CoV-2","GTCATTAGTCCCGTGA",2,6.8,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","V103L P161L",2
"lib1","SARS-CoV-2","GTCATTATAAATAAAA",1,6.3,11.04,0.28,0.21,3,1,0,"1 nonsynonymous","P197V",1
"lib1","SARS-CoV-2","GTCATTATAATTTATT",8,36.59,7.59,-3.18,0.4,1.5,1,0.06,">1 nonsynonymous","T85G C150M G155L V181L",4
"lib1","SARS-CoV-2","GTCATTATCGCGGTCT",3,89.19,10.14,-0.63,0.05,2.77,1,0,">1 nonsynonymous","R27N L57F N64L S129N",4
"lib1","SARS-CoV-2","GTCATTCACAGAGCAG",3,59.31,9.56,-1.21,0.07,2.91,1.07,0,">1 nonsynonymous","L5F Q168V T201M",3
"lib1","SARS-CoV-2","GTCATTCAGCAGTAGG",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D Y35T I138C",3
"lib1","SARS-CoV-2","GTCATTCAGGCTTACT",1,6.8,6,-4.76,2,2.61,1.18,0.02,">1 nonsynonymous","R27C P161I",2
"lib1","SARS-CoV-2","GTCATTCGACGAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A89* T100P",2
"lib1","SARS-CoV-2","GTCATTCTCGGGAATG",3,99.19,10.75,-0.01,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCATTGAACAGTGCG",3,8.75,7.92,-2.84,0.38,1.5,1.31,0.06,">1 nonsynonymous","V103L N118D",2
"lib1","SARS-CoV-2","GTCATTGCAACTGATA",7,87.39,9.97,-0.8,0.09,2.23,1.04,0,">1 nonsynonymous","V11Y N120F L162I",3
"lib1","SARS-CoV-2","GTCATTGTACCTATAG",3,1.35,NA,NA,NA,NA,NA,NA,"stop","T15* D59K Y119N",3
"lib1","SARS-CoV-2","GTCATTGTCACCATAA",1,9.01,7.38,-3.38,0.19,2.1,1.14,0.01,">1 nonsynonymous","S43F G86Y",2
"lib1","SARS-CoV-2","GTCATTGTTTCTCATT",2,65.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G86T K94Y S113I G174P T201W",5
"lib1","SARS-CoV-2","GTCATTTAAAACGAGG",3,0.17,NA,NA,NA,NA,NA,NA,"stop","G101P Y175*",2
"lib1","SARS-CoV-2","GTCATTTAACGCAAAA",4,55.65,10.59,-0.18,0.05,2.97,1.01,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","GTCATTTCAATACCAG",1,26.64,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","Y50S N58Q G155Y",3
"lib1","SARS-CoV-2","GTCATTTCAATTTCGA",2,10.08,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Y39S G86A F99D",3
"lib1","SARS-CoV-2","GTCATTTCCAAATAAG",5,105.92,9.8,-0.96,0.11,2.23,1.04,0,">1 nonsynonymous","A105S N130D I138L L162M",4
"lib1","SARS-CoV-2","GTCATTTCCTGTCCAG",6,51.98,8.26,-2.51,0.26,1.5,1.21,0.02,"1 nonsynonymous","R25G",1
"lib1","SARS-CoV-2","GTCATTTGCAGATTGG",9,160.09,10.01,-0.75,0.06,2.8,1,0,">1 nonsynonymous","I2M N13M D98N G174S",4
"lib1","SARS-CoV-2","GTCATTTGTGTTGCCT",4,58.24,8.15,-2.61,0.22,1.5,1.13,0.01,">1 nonsynonymous","E135R G155F",2
"lib1","SARS-CoV-2","GTCCAAAAAATGGCCC",2,28.01,9.87,-0.89,0.12,1.94,1.03,0.01,"1 nonsynonymous","A105N",1
"lib1","SARS-CoV-2","GTCCAAAATAAATTGT",2,14.79,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G9D G86F D98W F160V",4
"lib1","SARS-CoV-2","GTCCAAACAATGCTTT",3,65.31,10.72,-0.05,0.07,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCAAACACGCCCAA",1,44.44,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C61S Y143P F167V Y175V",4
"lib1","SARS-CoV-2","GTCCAAACTCGGGACC",11,131.75,10.24,-0.53,0.05,2.83,1.01,0,">1 nonsynonymous","C6F C31A S41Y V77L T201Y",5
"lib1","SARS-CoV-2","GTCCAAAGAATGATAA",8,222.28,10.77,0,0.04,2.91,1.01,0,"1 nonsynonymous","N64W",1
"lib1","SARS-CoV-2","GTCCAAAGTCCAGTCA",7,62.42,10.09,-0.67,0.06,2.51,1.05,0,">1 nonsynonymous","D34N N107P",2
"lib1","SARS-CoV-2","GTCCAAATACCATAAA",2,0.88,NA,NA,NA,NA,NA,NA,"stop","E10I I138*",2
"lib1","SARS-CoV-2","GTCCAAATAGATCGCT",2,19.03,9.02,-1.74,0.13,1.85,1.15,0.01,">1 nonsynonymous","Q84N Y121K",2
"lib1","SARS-CoV-2","GTCCAAATCTGACTAA",5,99.07,10.9,0.13,0.06,2.91,1.02,0,"1 nonsynonymous","N109K",1
"lib1","SARS-CoV-2","GTCCAAATCTTATGGA",4,15.03,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","G86K P96W N107V Y175T",4
"lib1","SARS-CoV-2","GTCCAACCAAAAGTAC",3,33.96,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T63D D90I D112M L122T A192Q",5
"lib1","SARS-CoV-2","GTCCAACCCCCCACGT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","E10P S69K V77*",3
"lib1","SARS-CoV-2","GTCCAACGGCGGGAAC",3,26.63,9.53,-1.24,0.13,1.81,1.1,0.01,">1 nonsynonymous","N58L S139I",2
"lib1","SARS-CoV-2","GTCCAACTAGCAAGGT",3,14.38,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N30L S45N N64I P82V",4
"lib1","SARS-CoV-2","GTCCAACTTACACCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R25* P82E",2
"lib1","SARS-CoV-2","GTCCAACTTTATGCTG",2,7.69,6.24,-4.53,1.72,1.5,1.23,0.08,">1 nonsynonymous","N13L D137T G146V",3
"lib1","SARS-CoV-2","GTCCAAGAACGAACAT",1,11.17,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","E76K V103Y",2
"lib1","SARS-CoV-2","GTCCAAGATAACATCG",3,41.65,10.1,-0.66,0.1,2.53,1.05,0,">1 nonsynonymous","D90V T100K",2
"lib1","SARS-CoV-2","GTCCAAGCGGCGCTCA",3,109.28,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y39S K48L N64T Q144L C158D",5
"lib1","SARS-CoV-2","GTCCAAGCGTCTGCCC",1,15.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N30V S45K D90R",3
"lib1","SARS-CoV-2","GTCCAAGTAAAGATGT",4,70.44,10.62,-0.14,0.06,2.9,1.05,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","GTCCAAGTCTATTTCT",3,20.98,10.14,-0.62,0.12,2.48,1.08,0.01,">1 nonsynonymous","D59S A89S N130F V173F",4
"lib1","SARS-CoV-2","GTCCAAGTGTGTAACG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","C61V I142*",2
"lib1","SARS-CoV-2","GTCCAATAGCTGTGAA",5,27.27,8.28,-2.49,0.12,2.38,1,0.01,">1 nonsynonymous","D75N G83Y D97S Q168L",4
"lib1","SARS-CoV-2","GTCCAATGACTGATAC",7,0.39,NA,NA,NA,NA,NA,NA,"stop","T63* P82I I88S Y175M",4
"lib1","SARS-CoV-2","GTCCAATGCACAAAAA",7,29.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6T Y50R T100R T201S",4
"lib1","SARS-CoV-2","GTCCAATTCCGTACGG",1,40.59,10.01,-0.75,0.1,2,1,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GTCCAATTTATATCGC",1,33.78,10.79,0.03,0.05,2.95,1.02,0,">1 nonsynonymous","I2V K128T",2
"lib1","SARS-CoV-2","GTCCACAAATTGGAAG",2,13.27,9.83,-0.94,0.15,2.69,1.08,0.01,">1 nonsynonymous","K87T P169H",2
"lib1","SARS-CoV-2","GTCCACAGAGACGTCT",2,64.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12H C61W D68L W106R P161C Y178W",6
"lib1","SARS-CoV-2","GTCCACAGTCAGTCGA",7,46.06,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","A42V N64W I88Y Y119V T201R",5
"lib1","SARS-CoV-2","GTCCACATCGTCCCCA",7,11.03,10.75,-0.02,0.08,2.71,1.23,0,"1 nonsynonymous","Y35F",1
"lib1","SARS-CoV-2","GTCCACCATTCAGTCA",4,13.3,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N13I D34R N118A",3
"lib1","SARS-CoV-2","GTCCACCCATATTTAC",2,17.94,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V37L G51S C61P A81K D97A N157Y",6
"lib1","SARS-CoV-2","GTCCACCCGGTCACTT",5,106.17,10.12,-0.64,0.05,2.78,1.05,0,">1 nonsynonymous","F44L L60S",2
"lib1","SARS-CoV-2","GTCCACCCGGTCTAAG",11,294.1,10.77,0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCACCGTATTCATG",2,22.33,10.66,-0.1,0.15,2.68,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTCCACCGTGAAACAA",7,142.89,10.59,-0.17,0.05,2.86,1.09,0,">1 nonsynonymous","N4P P149T",2
"lib1","SARS-CoV-2","GTCCACCTCAATCCTT",6,72.96,10.27,-0.5,0.08,2.86,1.05,0,">1 nonsynonymous","G152C A190V",2
"lib1","SARS-CoV-2","GTCCACCTTTATCGCC",7,166.89,10.34,-0.42,0.04,2.85,1.02,0,">1 nonsynonymous","I2E A18V N151D",3
"lib1","SARS-CoV-2","GTCCACGACACTCCGC",1,42.28,9.2,-1.56,0.13,2.82,1.1,0.01,">1 nonsynonymous","G9S N157Q",2
"lib1","SARS-CoV-2","GTCCACGAGTCATAAG",3,0.4,NA,NA,NA,NA,NA,NA,"stop","G9K N13K Y91P C150*",4
"lib1","SARS-CoV-2","GTCCACGTGTCACTGT",4,10.67,9.09,-1.67,0.35,1.55,1.14,0.06,">1 nonsynonymous","Y50H F62R",2
"lib1","SARS-CoV-2","GTCCACTAACATGATA",1,8.86,10.55,-0.22,0.16,2.51,1,0.01,">1 nonsynonymous","N64F D90G",2
"lib1","SARS-CoV-2","GTCCACTCCTAAAACT",2,44.82,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K26P F185L",2
"lib1","SARS-CoV-2","GTCCACTTCAATTTAA",1,22.09,9.79,-0.98,0.1,2.57,1.07,0,">1 nonsynonymous","C6Q L60E",2
"lib1","SARS-CoV-2","GTCCAGAAATACCTTA",5,77.43,10.78,0.02,0.06,2.91,1.01,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","GTCCAGAAATTGGTTC",5,97.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68A",1
"lib1","SARS-CoV-2","GTCCAGAATATTGATT",8,126.6,9.92,-0.85,0.06,2.61,1.06,0,">1 nonsynonymous","K26H N107S",2
"lib1","SARS-CoV-2","GTCCAGACAAGAGTGT",2,35.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53V P96R T100A",3
"lib1","SARS-CoV-2","GTCCAGACTAAGAGTA",3,10.6,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D34Q K56A R124P",3
"lib1","SARS-CoV-2","GTCCAGATTCGAAACC",2,32.73,10.74,-0.03,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCAGCAAATGCCTA",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I W106L P149S N157T",4
"lib1","SARS-CoV-2","GTCCAGCACTCCAATA",2,13.29,6,-4.76,1.42,3,1.13,0.01,">1 nonsynonymous","F17K W106K I138Y",3
"lib1","SARS-CoV-2","GTCCAGCAGTTTTTCT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","I2N N13* D59E N64T V71I P133T F156V F185C",8
"lib1","SARS-CoV-2","GTCCAGCCCATGTCTC",6,50.28,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S41A L95M P96Y V103I",4
"lib1","SARS-CoV-2","GTCCAGCTAAAATGGG",3,61.99,8.68,-2.08,0.32,1.5,1,0.04,">1 nonsynonymous","A22Q V77Q G83D",3
"lib1","SARS-CoV-2","GTCCAGCTGCGTACTT",12,222.15,10.59,-0.17,0.03,2.91,1.03,0,">1 nonsynonymous","C61Y E141T",2
"lib1","SARS-CoV-2","GTCCAGGACAGAAACC",9,3.65,NA,NA,NA,NA,NA,NA,"stop","T46R A67V K198*",3
"lib1","SARS-CoV-2","GTCCAGGGGGTCAAAA",1,42.77,8.11,-2.66,0.21,2.18,1.19,0.01,"1 nonsynonymous","Q176I",1
"lib1","SARS-CoV-2","GTCCAGGGTGATGATT",4,48.1,9,-1.76,0.33,1.5,1,0.06,">1 nonsynonymous","G83R L95T R136K I142L",4
"lib1","SARS-CoV-2","GTCCATAAGCAAGTAT",4,57.55,10.5,-0.27,0.05,2.87,1,0,">1 nonsynonymous","F8L L60P K114Q",3
"lib1","SARS-CoV-2","GTCCATAAGCTTGGCT",5,78.15,10.71,-0.06,0.04,2.95,1,0,">1 nonsynonymous","T3L S184W",2
"lib1","SARS-CoV-2","GTCCATAAGGCGGGAT",5,71.9,10.36,-0.4,0.14,2.74,1.06,0.01,">1 nonsynonymous","N40L K56M",2
"lib1","SARS-CoV-2","GTCCATAATGATGGCG",1,7.47,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","F70T S129M T170S",3
"lib1","SARS-CoV-2","GTCCATAGAAGAAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","V37* N107C F167R",3
"lib1","SARS-CoV-2","GTCCATATAATCTTAA",4,121.43,9.74,-1.02,0.05,2.89,1.05,0,"1 nonsynonymous","L125T",1
"lib1","SARS-CoV-2","GTCCATATCCGCGTGA",4,27.38,7.99,-2.77,0.28,1.5,1.06,0.02,">1 nonsynonymous","R25E K128Y",2
"lib1","SARS-CoV-2","GTCCATATGAGTTGTT",3,53.2,10.25,-0.52,0.08,2.62,1,0,">1 nonsynonymous","R16S F99L",2
"lib1","SARS-CoV-2","GTCCATATGCACTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","K56M K87* Y119H A190Y",4
"lib1","SARS-CoV-2","GTCCATATTAAGAGAT",4,113.89,10.74,-0.02,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCATCACATAACGG",2,7.12,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E10F S36R D112K",3
"lib1","SARS-CoV-2","GTCCATCACGATCGTT",2,0.19,NA,NA,NA,NA,NA,NA,"stop","K26T F44L S69* G86L C150Y L187Q",6
"lib1","SARS-CoV-2","GTCCATCATTAGTCAC",3,47.02,6,-4.76,1.1,1.5,1.19,0.01,">1 nonsynonymous","W23L G83Q N107V T140L L162K H189Y",6
"lib1","SARS-CoV-2","GTCCATCTTAATTTTG",2,27.44,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D68W K87C N120C",3
"lib1","SARS-CoV-2","GTCCATGAAATCCTGT",8,154.81,9.16,-1.6,0.09,1.84,1.13,0,">1 nonsynonymous","I28V Y39K D97V E154W",4
"lib1","SARS-CoV-2","GTCCATGACGGAGGGA",2,68.95,10.83,0.07,0.07,2.9,1.04,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","GTCCATGGTCCTATGG",10,145.84,8.05,-2.71,0.16,2.05,1.08,0.01,">1 nonsynonymous","V37A F47M K87I N107L Y175F P191H",6
"lib1","SARS-CoV-2","GTCCATGTGAATAGTT",5,87.48,10.36,-0.41,0.07,2.88,1,0,">1 nonsynonymous","T15G N110M",2
"lib1","SARS-CoV-2","GTCCATGTTCTGGCTT",7,209.8,10.75,-0.01,0.07,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCATTAAATGCCCA",10,31.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60A D90Y V103R R136T G152M F160T",6
"lib1","SARS-CoV-2","GTCCATTATCACCTAA",2,16.33,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I88D T100L E135P A192T",4
"lib1","SARS-CoV-2","GTCCCAAAATGGAGCA",3,65.16,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G146L Y178M",2
"lib1","SARS-CoV-2","GTCCCAAATGCATCAG",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P F62T G146L",3
"lib1","SARS-CoV-2","GTCCCAAATTGAAAAA",2,21.45,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N58M L95E",2
"lib1","SARS-CoV-2","GTCCCAATATGCGTAC",3,60.39,10.17,-0.59,0.05,2.87,1,0,">1 nonsynonymous","S41L P54G L95V",3
"lib1","SARS-CoV-2","GTCCCAATTGTTTACC",3,34.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10H Y39A K94M D112V G174R",5
"lib1","SARS-CoV-2","GTCCCACAAAGCAACA",7,71.96,6.9,-3.87,0.33,1.5,1.26,0.02,">1 nonsynonymous","G9E K56S I72S",3
"lib1","SARS-CoV-2","GTCCCACACATTACGC",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97N V180P",2
"lib1","SARS-CoV-2","GTCCCACGTACAACCC",1,30.3,9.69,-1.07,0.11,1.9,1.09,0,">1 nonsynonymous","T3R A18T S36C",3
"lib1","SARS-CoV-2","GTCCCACGTTTTGACG",3,32.62,10.68,-0.08,0.08,2.83,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCCAGACCAGAGTT",1,30.58,10.31,-0.45,0.05,2.88,1,0,">1 nonsynonymous","N40D C61H I138R",3
"lib1","SARS-CoV-2","GTCCCATATTCATCAG",6,61.07,10.6,-0.17,0.07,2.85,1.02,0,"1 nonsynonymous","S45K",1
"lib1","SARS-CoV-2","GTCCCATCTAACGTTG",13,3.01,NA,NA,NA,NA,NA,NA,"stop","G117V F126L P133M V153*",4
"lib1","SARS-CoV-2","GTCCCATTGAAACTGT",2,5.45,10.54,-0.22,0.18,2.83,1,0.01,">1 nonsynonymous","I2E N107S",2
"lib1","SARS-CoV-2","GTCCCCAATAACCATC",3,13.33,10.71,-0.06,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCCCAGTTAGGCAC",14,169.08,7.06,-3.7,0.28,1.5,1.1,0.02,">1 nonsynonymous","G9I W23V N30K",3
"lib1","SARS-CoV-2","GTCCCCCACGCCAATC",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S A105R S113F",3
"lib1","SARS-CoV-2","GTCCCCCCAACAACCG",2,52.24,6.25,-4.51,0.86,1.5,1.19,0.02,">1 nonsynonymous","D97N C150P",2
"lib1","SARS-CoV-2","GTCCCCGTGCTGAATG",3,44.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49G G117V R124V I142Y",4
"lib1","SARS-CoV-2","GTCCCCTATGACATCG",1,18.98,10.43,-0.34,0.09,2.9,1.05,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","GTCCCGAAACCAAAAC",5,1.93,NA,NA,NA,NA,NA,NA,"stop","K56I I72L K114Y E154R Y159*",5
"lib1","SARS-CoV-2","GTCCCGACGGGCAGCC",3,68,8.82,-1.95,0.09,2.67,1.06,0,">1 nonsynonymous","T55I E141P E154F",3
"lib1","SARS-CoV-2","GTCCCGAGTCCCAACA",10,156.9,10.77,0.01,0.07,2.93,1.04,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","GTCCCGCAGCATTCAG",6,109.68,8.32,-2.44,0.16,1.58,1.14,0.01,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","GTCCCGTACCCTTTCA",9,156.87,10.68,-0.08,0.06,2.85,1.09,0,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","GTCCCGTTAAAGAAGT",3,17.04,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G9P D90H F99K Y119C V153C",5
"lib1","SARS-CoV-2","GTCCCTATGTTTCACG",2,85.14,10.06,-0.71,0.14,1.74,1.08,0.01,">1 nonsynonymous","N64I F99L",2
"lib1","SARS-CoV-2","GTCCCTCAAAAACTGA",4,81.6,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","C49S Y93P V173S",3
"lib1","SARS-CoV-2","GTCCCTCAGACACATT",2,75.36,10.59,-0.17,0.06,2.95,1.02,0,">1 nonsynonymous","S129V F160T",2
"lib1","SARS-CoV-2","GTCCCTCCCGGTTAAC",1,15.89,8.72,-2.04,0.23,1.58,1.17,0.03,">1 nonsynonymous","Y35K A81T",2
"lib1","SARS-CoV-2","GTCCCTCCTGTGATCA",3,12.74,10.19,-0.58,0.16,2.71,1.03,0.02,">1 nonsynonymous","N4Q A18H K56R A81E D97S",5
"lib1","SARS-CoV-2","GTCCCTGACCCAAGTC",3,38.57,10.44,-0.32,0.05,2.94,1,0,"1 nonsynonymous","G51S",1
"lib1","SARS-CoV-2","GTCCCTGCTTCCACGG",1,29.41,6.24,-4.52,0.69,1.5,1.09,0.02,">1 nonsynonymous","G86V N130Y T140R N171D",4
"lib1","SARS-CoV-2","GTCCCTTTCAACCGAC",5,219.96,10.28,-0.48,0.04,2.84,1.02,0,"1 nonsynonymous","Y178L",1
"lib1","SARS-CoV-2","GTCCGAAACTTACTAT",3,54.12,10.73,-0.03,0.05,2.86,1.1,0,"1 nonsynonymous","S43R",1
"lib1","SARS-CoV-2","GTCCGAACGTTCAACG",8,23.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5C V103E Q176R",3
"lib1","SARS-CoV-2","GTCCGAACTCCACGGC",5,47.14,6.33,-4.43,0.37,1.5,1.17,0.01,">1 nonsynonymous","V11K S41L L95Q Y119I N171K T201A",6
"lib1","SARS-CoV-2","GTCCGACAACTTTCTA",7,56.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D112L G152R G172E",3
"lib1","SARS-CoV-2","GTCCGACAGGACAACT",3,63.53,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D68P D90Y P161C T170S",4
"lib1","SARS-CoV-2","GTCCGACCGACGCTAC",1,48.1,10.57,-0.19,0.12,2.88,1.09,0.01,"synonymous","",0
"lib1","SARS-CoV-2","GTCCGAGGAGCAACGG",3,105.77,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F134C P149W F160A Y175E",4
"lib1","SARS-CoV-2","GTCCGAGGAGGACATG",1,10.4,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F126D I142K",2
"lib1","SARS-CoV-2","GTCCGAGTTTTTAAGC",2,29.49,10.7,-0.06,0.09,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCGATAATCCAGAA",1,1.27,NA,NA,NA,NA,NA,NA,"stop","C61L A89* D98I Q176A",4
"lib1","SARS-CoV-2","GTCCGATTCAGTGAGG",4,48.18,10.16,-0.6,0.09,2.89,1,0,"1 nonsynonymous","I142Q",1
"lib1","SARS-CoV-2","GTCCGCAAAATCTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V32S A89F I142*",3
"lib1","SARS-CoV-2","GTCCGCACACCAAGCT",1,50.77,10.18,-0.58,0.09,2.83,1.02,0,">1 nonsynonymous","D98N T148K G155I",3
"lib1","SARS-CoV-2","GTCCGCACAGTACTAG",3,96.51,10.68,-0.08,0.04,2.93,1.03,0,">1 nonsynonymous","T140Y K198S",2
"lib1","SARS-CoV-2","GTCCGCAGTACAACAA",3,27.18,6,-4.76,2,1.5,1.28,0.04,"1 nonsynonymous","L95Y",1
"lib1","SARS-CoV-2","GTCCGCGAGAAATACG",5,14.28,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A42L D68R N171L",3
"lib1","SARS-CoV-2","GTCCGGAGCTAAAACC",4,35.98,10.91,0.14,0.09,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCGGATGACGCATT",3,78.79,10.74,-0.03,0.06,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCCGGCAAATATCAT",2,89.24,8.95,-1.81,0.07,2.85,1.12,0,">1 nonsynonymous","K26L L60M L125R",3
"lib1","SARS-CoV-2","GTCCGGCCGACCATAT",2,19.7,6,-4.76,2,3,1.4,0.02,">1 nonsynonymous","L5W Y50I C158G",3
"lib1","SARS-CoV-2","GTCCGGGCCAAAATCT",3,27.58,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99S Y121I P197Y",3
"lib1","SARS-CoV-2","GTCCGGGCCTTTAAGA",6,86.02,10.76,0,0.03,2.92,1.04,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","GTCCGGGGACCAACAA",5,63.65,10.15,-0.62,0.05,2.94,1,0,">1 nonsynonymous","A105S Q168N",2
"lib1","SARS-CoV-2","GTCCGGTAAATTTTAT",1,11.39,8.63,-2.13,0.4,1.97,1.19,0.07,">1 nonsynonymous","N107A Y119C F134Y",3
"lib1","SARS-CoV-2","GTCCGGTGTAAAATTG",4,100.65,9.97,-0.8,0.1,2.42,1.03,0,">1 nonsynonymous","N4L R127K",2
"lib1","SARS-CoV-2","GTCCGGTGTTCAAAAT",1,32.39,6,-4.76,1.11,3,1.19,0.01,">1 nonsynonymous","G83I I104S",2
"lib1","SARS-CoV-2","GTCCGTAAAGTCTCAA",2,10.84,9.72,-1.05,0.12,2.89,1.02,0.02,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","GTCCGTAAATCCCGAA",2,26.06,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61R K94C R127K",3
"lib1","SARS-CoV-2","GTCCGTACGTTAGTCA",5,0.87,NA,NA,NA,NA,NA,NA,"stop","Y39* L60W E154N",3
"lib1","SARS-CoV-2","GTCCGTCACTTCACGT",1,12.5,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A14V V37Y S41R T100K W106S D137V",6
"lib1","SARS-CoV-2","GTCCGTCTAAAGTTTT",1,0.32,NA,NA,NA,NA,NA,NA,"stop","S19* F44D",2
"lib1","SARS-CoV-2","GTCCGTGCCGGTTTCG",6,185.89,10.66,-0.11,0.05,2.89,1.08,0,">1 nonsynonymous","N58T K199Y",2
"lib1","SARS-CoV-2","GTCCGTTCGCCCCAAA",1,25.24,6.04,-4.73,1.39,1.5,1.12,0.03,">1 nonsynonymous","E10M G86C N92Q",3
"lib1","SARS-CoV-2","GTCCTAAATAGCATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25V S43A D59T N64P R73E K87I S113A P149T S184L",9
"lib1","SARS-CoV-2","GTCCTAAGTAACGTTC",12,110.64,7.55,-3.22,0.25,1.5,1.16,0.01,">1 nonsynonymous","C6F A22L E141R",3
"lib1","SARS-CoV-2","GTCCTAATGTGATTAG",2,38.72,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T46V C61I N107H G117I F167I P197Q",6
"lib1","SARS-CoV-2","GTCCTACAGCCACAGG",2,13.01,6,-4.76,1.78,3,1.17,0.01,">1 nonsynonymous","D75S D90N Y123M T140F L162S P197A",6
"lib1","SARS-CoV-2","GTCCTACGCTACCTTC",7,3.08,NA,NA,NA,NA,NA,NA,"stop","N4Q A18L S29* A105Y",4
"lib1","SARS-CoV-2","GTCCTACTTTACGCTT",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I D34G F160T Q176V",4
"lib1","SARS-CoV-2","GTCCTAGGAACTTGTG",3,64.14,10.78,0.02,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCTATAAAATGAAT",2,39.55,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T3M G86L L122E",3
"lib1","SARS-CoV-2","GTCCTATATTATGCCA",4,46.43,9.94,-0.83,0.1,2.75,1.04,0,">1 nonsynonymous","T63P D75N N120E K132N",4
"lib1","SARS-CoV-2","GTCCTATGCTCCTAAG",1,63.45,8.43,-2.33,0.12,2.88,1.03,0.01,">1 nonsynonymous","E154F G174L",2
"lib1","SARS-CoV-2","GTCCTATTACAGCAAT",5,0.45,NA,NA,NA,NA,NA,NA,"stop","N4* S41P D59G L95V K114L",5
"lib1","SARS-CoV-2","GTCCTATTGGCTAAGA",3,8.93,10.33,-0.43,0.17,2.75,1.14,0.01,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","GTCCTCATTCACCAAA",2,53.12,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S113R G117L I138T A145S",4
"lib1","SARS-CoV-2","GTCCTCCAATGCACGC",7,72.94,8.64,-2.12,0.18,1.86,1.18,0.01,">1 nonsynonymous","V11H S113G",2
"lib1","SARS-CoV-2","GTCCTCCCCCAAGTAG",1,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","GTCCTCCCGTATCAGT",1,9.88,10.16,-0.61,0.11,2.96,1,0.01,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","GTCCTCCGTAACCTGA",4,21.56,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","C49D",1
"lib1","SARS-CoV-2","GTCCTCGAAATTCAAC",12,109.01,10.31,-0.45,0.05,2.86,1.02,0,">1 nonsynonymous","A22C N151S V173F",3
"lib1","SARS-CoV-2","GTCCTCGCCCTTCAAT",1,54.15,10.7,-0.06,0.05,2.95,1.02,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","GTCCTCGCTACTTGAA",2,28.56,10.75,-0.01,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCCTCTACACTTACG",2,26.89,10.3,-0.46,0.07,2.8,1.02,0,">1 nonsynonymous","E10C T148L",2
"lib1","SARS-CoV-2","GTCCTCTCATACCTTT",4,35.08,10.2,-0.56,0.07,2.82,1.04,0,">1 nonsynonymous","N24F T201L",2
"lib1","SARS-CoV-2","GTCCTCTTATAGCGGT",4,30.63,10.46,-0.31,0.04,2.98,1,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","GTCCTGAACTACGAGT",3,1.02,NA,NA,NA,NA,NA,NA,"stop","N24G S41* D59T D68*",4
"lib1","SARS-CoV-2","GTCCTGAATGACCCCG",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H T55L Q176S",3
"lib1","SARS-CoV-2","GTCCTGACACAGGCAG",5,10.2,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T15E K48G S113E P149S",4
"lib1","SARS-CoV-2","GTCCTGACACTCAAGT",1,15.78,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N30E N40C L57R G83S K94L",5
"lib1","SARS-CoV-2","GTCCTGCTGTAACCGG",9,287.6,8.35,-2.41,0.14,2.02,1.09,0.01,">1 nonsynonymous","G116M Q176S",2
"lib1","SARS-CoV-2","GTCCTGGAGTACCGAT",4,38.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37R P54E K94G Y165A",4
"lib1","SARS-CoV-2","GTCCTGGTCCTTCAAT",6,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R T46C L60K A105G S113T",5
"lib1","SARS-CoV-2","GTCCTGTCAAGATACT",2,18.75,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A14L S41V V52M A81Q Y91R Y121N",6
"lib1","SARS-CoV-2","GTCCTTAACATAGATA",4,67.82,10.58,-0.19,0.07,2.94,1.05,0,">1 nonsynonymous","P149Y T201M",2
"lib1","SARS-CoV-2","GTCCTTAAGCATAAAG",3,23.03,8.51,-2.25,0.16,2.47,1.08,0.02,">1 nonsynonymous","Y35W F99I L125R S147G",4
"lib1","SARS-CoV-2","GTCCTTAATTAAGTGA",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P R73E N92K Y165Q L183K",5
"lib1","SARS-CoV-2","GTCCTTACAATCGCCG",3,55.52,10,-0.76,0.05,2.87,1,0,">1 nonsynonymous","T63D Y143L",2
"lib1","SARS-CoV-2","GTCCTTAGTCTAATTT",6,24.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S L95H G116R L131V",4
"lib1","SARS-CoV-2","GTCCTTCAATAGCTTA",3,0.98,NA,NA,NA,NA,NA,NA,"stop","F12* N40S K128I",3
"lib1","SARS-CoV-2","GTCCTTCACACGCGCA",6,91.33,10.21,-0.56,0.1,2.91,1,0,">1 nonsynonymous","Y143M P197K",2
"lib1","SARS-CoV-2","GTCCTTCCACGAGGTT",4,32.03,10.02,-0.74,0.15,2.4,1,0.01,">1 nonsynonymous","A14Y V37L",2
"lib1","SARS-CoV-2","GTCCTTCGTAAATTTA",7,128.74,10.72,-0.05,0.07,2.88,1.09,0,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","GTCCTTCGTACACGAA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30T I104K K114T Y123H P177T V182M",6
"lib1","SARS-CoV-2","GTCCTTCTAAAAGGAA",20,108.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y35D P82M L122G G152N Q168S",5
"lib1","SARS-CoV-2","GTCCTTCTATCGCATG",6,52.54,10.76,-0.01,0.09,2.92,1.07,0,">1 nonsynonymous","V37S K198P",2
"lib1","SARS-CoV-2","GTCCTTCTTAGACGAA",3,30.76,8.32,-2.44,0.22,1.5,1.18,0.02,">1 nonsynonymous","T3V T148I P161V",3
"lib1","SARS-CoV-2","GTCCTTGACAGAACGA",8,61.94,9.93,-0.84,0.13,2.17,1.03,0.01,"1 nonsynonymous","F17S",1
"lib1","SARS-CoV-2","GTCCTTGAGCAGCTGA",3,41.24,6,-4.76,1.19,1.5,1.23,0.03,">1 nonsynonymous","N30M A105H",2
"lib1","SARS-CoV-2","GTCCTTGCGAGAACTA",5,87.7,10.66,-0.11,0.04,2.83,1.08,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","GTCCTTGTGAGATGCG",10,46.92,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L57S G101S I142M",3
"lib1","SARS-CoV-2","GTCCTTTACAAGAGCA",1,14.34,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","A89K Y123T",2
"lib1","SARS-CoV-2","GTCCTTTATCTACCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A81* Y143D",2
"lib1","SARS-CoV-2","GTCCTTTGAGGCAATT",9,80.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71I Y91K N107C",3
"lib1","SARS-CoV-2","GTCCTTTTACTGATAA",1,5.35,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15E I80S G101M Y165L",4
"lib1","SARS-CoV-2","GTCCTTTTCGATACCA",2,65.88,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D112I F167T",2
"lib1","SARS-CoV-2","GTCGAAAACACTAAGT",5,34.55,7.07,-3.7,0.35,1.5,1.3,0.02,">1 nonsynonymous","F12D L38T",2
"lib1","SARS-CoV-2","GTCGAAAACTACCTGT",3,41.76,9.86,-0.9,0.11,2.6,1,0.01,">1 nonsynonymous","C6K S200A",2
"lib1","SARS-CoV-2","GTCGAAAAGCTTATTA",5,84.49,9.27,-1.49,0.14,1.61,1.14,0.01,">1 nonsynonymous","S29T V103L T201K",3
"lib1","SARS-CoV-2","GTCGAAACAGCTGTAA",3,33.47,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10V K128I C150R",3
"lib1","SARS-CoV-2","GTCGAAAGACATTCTA",8,103.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36L V103W I142F",3
"lib1","SARS-CoV-2","GTCGAAATGAGATCCA",1,44.79,6.07,-4.69,0.75,1.5,1.16,0.02,">1 nonsynonymous","T100Y L131E",2
"lib1","SARS-CoV-2","GTCGAAGCAAATAGTA",2,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45E P169D",2
"lib1","SARS-CoV-2","GTCGAATAAAAGCGAT",3,40.39,9.19,-1.57,0.18,1.86,1.16,0.02,">1 nonsynonymous","A89D P197M",2
"lib1","SARS-CoV-2","GTCGAATCCAATTAAA",9,100.04,8.76,-2,0.16,1.67,1.18,0.01,">1 nonsynonymous","F44L L60E N107Q",3
"lib1","SARS-CoV-2","GTCGAATTCGCGGGGA",5,91.96,9.95,-0.81,0.11,2.43,1.06,0,">1 nonsynonymous","T46V D90Y S164Y",3
"lib1","SARS-CoV-2","GTCGACACTCGCGGAT",13,141.05,10.72,-0.05,0.07,2.92,1.05,0,"1 nonsynonymous","Y39S",1
"lib1","SARS-CoV-2","GTCGACACTGATGACA",2,87.18,10.72,-0.04,0.05,2.9,1.05,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","GTCGACACTGTAAGCC",4,34.4,9.9,-0.87,0.09,2.13,1.09,0,">1 nonsynonymous","D90Y I104A K132R V173I",4
"lib1","SARS-CoV-2","GTCGACAGTGAATCTA",7,54.41,9.99,-0.78,0.15,2.19,1.07,0.01,">1 nonsynonymous","A42R D98I Y121F T140R E154H V173I",6
"lib1","SARS-CoV-2","GTCGACCGCGACAGTA",4,76.5,10.46,-0.31,0.04,2.96,1.01,0,">1 nonsynonymous","L5K D98S G116D",3
"lib1","SARS-CoV-2","GTCGACCGTTACAACT",6,157.73,9.57,-1.19,0.07,2.02,1.06,0,">1 nonsynonymous","V11P F44W N151V",3
"lib1","SARS-CoV-2","GTCGACCTGTCAAAAT",2,58.23,10.52,-0.24,0.06,2.9,1.01,0,">1 nonsynonymous","P7C N120S",2
"lib1","SARS-CoV-2","GTCGACTAATATCACA",10,103.65,7.51,-3.26,0.26,1.5,1.14,0.02,">1 nonsynonymous","F12Y L60A Y143L K198L",4
"lib1","SARS-CoV-2","GTCGACTTCTTATAAA",1,5.58,6.18,-4.58,1.16,1.5,1.17,0.04,">1 nonsynonymous","F8C C31V A89R L95A D98F T170I",6
"lib1","SARS-CoV-2","GTCGAGAAACCTCGAC",6,0.63,NA,NA,NA,NA,NA,NA,"stop","T3D N13R Y39* D97I R124N L188F",6
"lib1","SARS-CoV-2","GTCGAGAAGTGAACAA",4,32.66,9.89,-0.87,0.18,2.08,1.09,0.02,">1 nonsynonymous","T3S K56Q D98I P133H",4
"lib1","SARS-CoV-2","GTCGAGACCACGCAGT",2,35.14,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","W23E F44E",2
"lib1","SARS-CoV-2","GTCGAGACGATAGTAC",11,20.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41Y G51V G116Y G146F",4
"lib1","SARS-CoV-2","GTCGAGAGTTGAGCAA",8,57.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A22E A42T C61E A105K K128R F160S",6
"lib1","SARS-CoV-2","GTCGAGGACAAGACTT",3,5.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M S45T F185A",3
"lib1","SARS-CoV-2","GTCGAGGATTCAAAAA",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I F99L F160P",3
"lib1","SARS-CoV-2","GTCGAGGCAAAATAAA",7,60.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V65L Y159T",2
"lib1","SARS-CoV-2","GTCGAGTTAGTTTCAC",1,7.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F C49N T63E N107W",4
"lib1","SARS-CoV-2","GTCGATATCTTACCAT",8,38.93,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","T3V V77N I88F D97S S113I",5
"lib1","SARS-CoV-2","GTCGATATGAATGAGG",1,37.48,10.71,-0.05,0.06,2.85,1.07,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","GTCGATATGCACGTGA",3,13.36,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S41Y L60S V77S R136T S164C",5
"lib1","SARS-CoV-2","GTCGATCCTCTAGACT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","N13A G146L G196*",3
"lib1","SARS-CoV-2","GTCGATCCTTACTCAC",8,102.11,9.2,-1.56,0.07,2.68,1.11,0,">1 nonsynonymous","D98L N118S",2
"lib1","SARS-CoV-2","GTCGATCTAGAGTAAT",5,19.52,6,-4.76,1.47,1.5,1.21,0.02,">1 nonsynonymous","T15F K56E V77S A89W S108D G155S",6
"lib1","SARS-CoV-2","GTCGATCTGATTAAAG",2,8.88,NA,NA,NA,NA,NA,NA,"stop","I104* Y119Q",2
"lib1","SARS-CoV-2","GTCGATCTTATTATTA",4,106.5,8.53,-2.23,0.17,1.52,1.18,0.01,">1 nonsynonymous","Y39T G86M H189S",3
"lib1","SARS-CoV-2","GTCGATGATTTTTAAG",4,14.54,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K128Q P177D",2
"lib1","SARS-CoV-2","GTCGATGCTTACGAAT",4,36.18,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31F F134I G146I N151K",4
"lib1","SARS-CoV-2","GTCGATTCCTGACATC",3,2.87,NA,NA,NA,NA,NA,NA,"stop","N4* T201A",2
"lib1","SARS-CoV-2","GTCGATTCGCAAGTCA",2,5.78,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","D98A V180F",2
"lib1","SARS-CoV-2","GTCGCAAACTTAAAGT",8,88.94,10.73,-0.03,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCGCACACCCTGGTT",1,16.76,10.71,-0.05,0.1,2.96,1,0,"1 nonsynonymous","A42F",1
"lib1","SARS-CoV-2","GTCGCACATTATAAGC",1,5.13,8.91,-1.85,0.32,1.5,1.03,0.04,">1 nonsynonymous","P82A H189Y",2
"lib1","SARS-CoV-2","GTCGCACCTACTAGGT",2,36.15,10.74,-0.03,0.07,2.89,1,0,"1 nonsynonymous","K94R",1
"lib1","SARS-CoV-2","GTCGCACGATTTGCCT",2,30.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84L I104G S108I L122D K128R Y143I C150S K199T",8
"lib1","SARS-CoV-2","GTCGCACTAGAATGTC",4,45,9.87,-0.89,0.13,1.99,1.02,0.01,">1 nonsynonymous","V11W W106L",2
"lib1","SARS-CoV-2","GTCGCACTTAATTCTT",6,13.25,6,-4.76,1.27,2.78,1.15,0,">1 nonsynonymous","G51I G83A R136Y",3
"lib1","SARS-CoV-2","GTCGCAGCTGCCAGAC",3,74.43,10.86,0.09,0.08,2.9,1.02,0,">1 nonsynonymous","V153L L188M",2
"lib1","SARS-CoV-2","GTCGCAGGATAGCAAG",6,90.63,6,-4.76,0.49,3,1.15,0,">1 nonsynonymous","V37A N64R C150E",3
"lib1","SARS-CoV-2","GTCGCAGTAATCCAGA",2,58.12,10.73,-0.04,0.07,2.9,1.08,0,"1 nonsynonymous","S43P",1
"lib1","SARS-CoV-2","GTCGCATAAACAAGTA",1,19.15,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S139P T170F",2
"lib1","SARS-CoV-2","GTCGCATAATCCACGT",2,4.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","GTCGCATAATCCCGAA",5,55.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T55P Q79T Y91L V115N P149R G152A",6
"lib1","SARS-CoV-2","GTCGCATGCAACCCAG",1,25.96,9.42,-1.35,0.25,1.5,1.07,0.04,">1 nonsynonymous","P96R L183F",2
"lib1","SARS-CoV-2","GTCGCATGGAGGCCGC",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D68L T148F",3
"lib1","SARS-CoV-2","GTCGCATTGAACAGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib1","SARS-CoV-2","GTCGCCAAAACTTATA",10,123.35,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12L A89L E141V G166S",4
"lib1","SARS-CoV-2","GTCGCCAGGGTAAGAC",5,33.93,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A33Q F44K Y50S F99P E141H F185N",6
"lib1","SARS-CoV-2","GTCGCCCATCCAGTTG",1,45.81,10.75,-0.01,0.03,2.99,1.01,0,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","GTCGCCCATGGATAAT",1,25.63,9.16,-1.6,0.21,2.21,1.15,0.02,"1 nonsynonymous","R73I",1
"lib1","SARS-CoV-2","GTCGCCCCCCGTAATG",4,44.23,10.68,-0.08,0.06,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCGCCGAATTAGGCA",8,143.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y39S L95A S139C",3
"lib1","SARS-CoV-2","GTCGCCGCTTACTCAT",3,30.07,6,-4.76,1.21,1.5,1.13,0.01,">1 nonsynonymous","K48T K56G N107F E141A",4
"lib1","SARS-CoV-2","GTCGCCTAACAGTGAG",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y A105P R127A Y165W",4
"lib1","SARS-CoV-2","GTCGCCTGCAAATCGC",4,1.89,NA,NA,NA,NA,NA,NA,"stop","Q84* I88S T100* D112I",4
"lib1","SARS-CoV-2","GTCGCGACAGAATTAT",7,49.38,10.42,-0.35,0.04,2.88,1.01,0,">1 nonsynonymous","N4G Q84L N151T N171F",4
"lib1","SARS-CoV-2","GTCGCGCCACTTCTTG",1,15.71,7.59,-3.18,0.35,1.5,1,0.06,">1 nonsynonymous","F8T F44A V71K K114L R124H Y159N T201R",7
"lib1","SARS-CoV-2","GTCGCGGAAAAACCGA",6,3.58,NA,NA,NA,NA,NA,NA,"stop","S19W S139Y T201*",3
"lib1","SARS-CoV-2","GTCGCGGACAAAACCA",9,69.5,7.89,-2.88,0.23,1.5,1.13,0.02,">1 nonsynonymous","N1S V37L F44C N107E",4
"lib1","SARS-CoV-2","GTCGCGGCCCGAATCA",1,39.13,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68I A105N L131V C150P Y178T",5
"lib1","SARS-CoV-2","GTCGCGGTTCGCTTTT",2,60.84,10.35,-0.42,0.05,2.83,1.01,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","GTCGCTAAATACTACG",5,53.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P54A I88N P96S A105G",4
"lib1","SARS-CoV-2","GTCGCTAAATTTCGTC",2,18.69,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","N92L A190V K199A",3
"lib1","SARS-CoV-2","GTCGCTCAGACAGTTC",6,1.83,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib1","SARS-CoV-2","GTCGCTCTTTCTAGTC",2,69.87,10.58,-0.18,0.04,2.92,1.02,0,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","GTCGCTGCTATTTAAG",2,13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V65D A105P D112E F167V",4
"lib1","SARS-CoV-2","GTCGCTGGGAGTTGAA",16,170.02,10.7,-0.07,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCGCTTAAAATTATT",6,66.63,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T3M T55S D112V L122T T170V",5
"lib1","SARS-CoV-2","GTCGCTTAAATACAAA",1,45.5,9.78,-0.98,0.11,1.92,1.07,0.01,">1 nonsynonymous","G9I T15L D98F",3
"lib1","SARS-CoV-2","GTCGCTTGTCTAACAT",4,31.56,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","K94W Y121V N130H S139Q Y175M",5
"lib1","SARS-CoV-2","GTCGCTTTCTGATAGT",1,0.82,NA,NA,NA,NA,NA,NA,"stop","E10* R25E G86T R136L",4
"lib1","SARS-CoV-2","GTCGCTTTGCATAAAA",4,8.83,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","P82Y I88V T170F",3
"lib1","SARS-CoV-2","GTCGGAATTGTAAAAT",3,11.23,9.38,-1.38,0.11,3,1.06,0,">1 nonsynonymous","K56Y L125N V153G",3
"lib1","SARS-CoV-2","GTCGGACAAGAACCTG",4,3.97,NA,NA,NA,NA,NA,NA,"stop","G9V A33L S45W T55*",4
"lib1","SARS-CoV-2","GTCGGACCTTTACAAA",3,85.94,10.49,-0.27,0.05,2.88,1.01,0,">1 nonsynonymous","F8L T63S A105T",3
"lib1","SARS-CoV-2","GTCGGAGCACGCGTTT",1,21.96,9.51,-1.26,0.06,2.88,1,0,">1 nonsynonymous","N120S I142R",2
"lib1","SARS-CoV-2","GTCGGATTCACTAGGA",2,19.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78S V181N",2
"lib1","SARS-CoV-2","GTCGGCACGATGCAGA",3,19.18,9.4,-1.36,0.3,1.5,1.08,0.03,">1 nonsynonymous","E10G P96D P149M",3
"lib1","SARS-CoV-2","GTCGGCATTGCTACGC",5,105.18,10.69,-0.08,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCGGCCCACCATGTG",2,13.72,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F47S L57D K87R D97L Y121W S139A",6
"lib1","SARS-CoV-2","GTCGGCCCATCCCAGT",13,6.57,NA,NA,NA,NA,NA,NA,"stop","P7L S43N D90C F99V A105* K132G P149M",7
"lib1","SARS-CoV-2","GTCGGCGCTGCGCGAG",3,43.5,9.77,-1,0.06,2.91,1.03,0,">1 nonsynonymous","I104Y Y143W",2
"lib1","SARS-CoV-2","GTCGGCTAACAGCAGC",6,45.32,6,-4.76,2,3,1.13,0,">1 nonsynonymous","L38H C61M Y66L D112W P197S",5
"lib1","SARS-CoV-2","GTCGGGCGTAGCCCCA",6,91.97,10.74,-0.02,0.07,2.89,1.05,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","GTCGGTATTCTTTCAA",4,28.37,10.88,0.12,0.08,2.9,1.04,0,">1 nonsynonymous","G9S V173H",2
"lib1","SARS-CoV-2","GTCGGTGACTAGACAA",1,75.38,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F17N Y35P A81I N92P D97E",5
"lib1","SARS-CoV-2","GTCGGTTGAAACTAGA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","S36V I88* P161S",3
"lib1","SARS-CoV-2","GTCGGTTGTTCCATAA",6,1.26,NA,NA,NA,NA,NA,NA,"stop","L5* D90S",2
"lib1","SARS-CoV-2","GTCGGTTTTTAGAACT",8,85.44,6,-4.76,1.36,1.5,1.16,0.01,">1 nonsynonymous","W106L L122P Q176R",3
"lib1","SARS-CoV-2","GTCGTAATTCGGAAAT",4,55.6,10.67,-0.1,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCGTAGAACTAATAC",9,78.25,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D98N S113P G152T",3
"lib1","SARS-CoV-2","GTCGTAGCAGCCGAGA",2,59.4,9.86,-0.9,0.13,2.04,1.1,0.01,">1 nonsynonymous","V65L A105F",2
"lib1","SARS-CoV-2","GTCGTAGGAAGTAATG",7,166.24,9.26,-1.5,0.08,2.66,1.14,0,">1 nonsynonymous","L5A G146M",2
"lib1","SARS-CoV-2","GTCGTAGGAATAGTAA",3,38,6.75,-4.02,0.44,1.5,1.16,0.03,">1 nonsynonymous","Y35L D90S S129L P149T F167L K199L",6
"lib1","SARS-CoV-2","GTCGTATAAAAGATTC",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D97V G146V",3
"lib1","SARS-CoV-2","GTCGTCAAGATGCCGA",7,37.97,8.99,-1.77,0.28,1.5,1.01,0.04,">1 nonsynonymous","S41L W106D",2
"lib1","SARS-CoV-2","GTCGTCAGTTAAATCA",1,22.91,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L57F G74P P82L A105L G146S F156P V173H",7
"lib1","SARS-CoV-2","GTCGTCCAAAGCCTTA",4,167.61,10.23,-0.53,0.05,2.76,1.03,0,">1 nonsynonymous","T100K N107C",2
"lib1","SARS-CoV-2","GTCGTTAAAGATGATA",13,25.4,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","D34P F44S V77W L95N",4
"lib1","SARS-CoV-2","GTCGTTAAGACCACGC",5,137.88,10.06,-0.71,0.08,2.63,1.04,0,">1 nonsynonymous","I88V D98C",2
"lib1","SARS-CoV-2","GTCGTTATTCTCTCAT",6,23.81,6.06,-4.7,1.22,1.5,1.2,0.04,">1 nonsynonymous","N13R D97N G117T N120M T170K",5
"lib1","SARS-CoV-2","GTCGTTCCAACGCTTG",3,26.85,6.7,-4.07,0.55,1.5,1.19,0.06,"1 nonsynonymous","N92P",1
"lib1","SARS-CoV-2","GTCGTTGTTAGTTGTA",7,54.59,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","A81R C150H F167P",3
"lib1","SARS-CoV-2","GTCTAAAAACTTCATT",3,29.57,6,-4.76,1.53,1.5,1.22,0.04,">1 nonsynonymous","G9R A18K G86S F126S Y178C",5
"lib1","SARS-CoV-2","GTCTAAACAATAATGA",2,5.48,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","C6M G74Y R124H A145Y N171S P197T",6
"lib1","SARS-CoV-2","GTCTAAAGAATGAACT",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S A89D F99R K114E G116L D137P",6
"lib1","SARS-CoV-2","GTCTAAAGCAAAACAC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G R124S F167S F185K",4
"lib1","SARS-CoV-2","GTCTAAAGCAATAGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V G51P Y143G T148A",4
"lib1","SARS-CoV-2","GTCTAAATAACTCAGG",1,18.57,8.78,-1.99,0.09,2.6,1.04,0,">1 nonsynonymous","A22M S41D K87H T100I Y121T",5
"lib1","SARS-CoV-2","GTCTAAATATAGACGG",2,26.53,6.15,-4.62,0.9,1.5,1.21,0.03,">1 nonsynonymous","Y35K P54V Y119L Y165L",4
"lib1","SARS-CoV-2","GTCTAAATCCACCTAA",6,102.24,8.87,-1.9,0.07,2.69,1.08,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","GTCTAACAAACCTCCT",7,22.78,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F8D D59S Q84K C102T Y165T",5
"lib1","SARS-CoV-2","GTCTAACAAAGACAAA",5,42.66,8.28,-2.49,0.34,1.5,1,0.05,">1 nonsynonymous","L60Y A89E T201S",3
"lib1","SARS-CoV-2","GTCTAACACGGGAACC",3,117.74,10.74,-0.03,0.04,2.96,1,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","GTCTAACAGCAGAGCC",13,510.56,8.97,-1.79,0.08,2.21,1.12,0,">1 nonsynonymous","V153L Q176R",2
"lib1","SARS-CoV-2","GTCTAACCAAACTGTA",2,61.1,10.7,-0.06,0.05,2.92,1.02,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","GTCTAACCCAGCATCT",5,24.76,6.07,-4.69,0.99,1.83,1.2,0.02,">1 nonsynonymous","D98E R127I G146W",3
"lib1","SARS-CoV-2","GTCTAACGCCAACTCA",6,130.56,10.51,-0.25,0.04,2.94,1.01,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","GTCTAACGGAATATAG",2,18.21,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A18S S53H D59Y N107I R127S C158V",6
"lib1","SARS-CoV-2","GTCTAACGTAAAAGAG",5,78.06,10.37,-0.39,0.04,2.89,1.02,0,">1 nonsynonymous","S43W N58V",2
"lib1","SARS-CoV-2","GTCTAAGAAAAACAAG",6,34.42,9.82,-0.94,0.13,1.84,1.06,0.01,">1 nonsynonymous","D34N D90F V180I",3
"lib1","SARS-CoV-2","GTCTAAGAATGACTAC",6,39.01,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P82G G117C",2
"lib1","SARS-CoV-2","GTCTAAGACAAAGAAA",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42W C61S",2
"lib1","SARS-CoV-2","GTCTAAGACCACTTAT",3,24.48,10.19,-0.58,0.12,2.75,1.03,0,">1 nonsynonymous","D98R S139N",2
"lib1","SARS-CoV-2","GTCTAAGATACTTACA",4,15.06,10.05,-0.71,0.21,1.89,1.04,0.01,">1 nonsynonymous","N13W L60H N151M",3
"lib1","SARS-CoV-2","GTCTAAGCCCCGTCGC",1,13.26,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41D T63P F99T A192I K198W",5
"lib1","SARS-CoV-2","GTCTAAGCTAATTCGG",5,32.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11G L57G D112L",3
"lib1","SARS-CoV-2","GTCTAAGGAATACTGC",1,14.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L F44R R73H L95H",4
"lib1","SARS-CoV-2","GTCTAATAACTTTAGC",4,19.01,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","Q84K K94G T148L G152L",4
"lib1","SARS-CoV-2","GTCTAATATACGACTT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","E10N S36* Q84R P149R V182F",5
"lib1","SARS-CoV-2","GTCTAATATCGTATGT",10,63.66,6.05,-4.71,1.03,1.5,1.21,0.03,">1 nonsynonymous","I28R T55F Y91W C158N Q168N",5
"lib1","SARS-CoV-2","GTCTAATATTACAGCA",5,85.93,9.57,-1.2,0.05,2.85,1.05,0,">1 nonsynonymous","T55E G146E",2
"lib1","SARS-CoV-2","GTCTAATTCAACTCGG",5,100.35,9.28,-1.48,0.09,2.71,1.13,0,">1 nonsynonymous","D98G E154Y K198N",3
"lib1","SARS-CoV-2","GTCTAATTCGAAACAG",12,146.69,9.92,-0.85,0.07,2.06,1.04,0,"1 nonsynonymous","F70Y",1
"lib1","SARS-CoV-2","GTCTACAAAATGAAAA",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F P96E T140W S184K",4
"lib1","SARS-CoV-2","GTCTACAAATAATTTA",3,21.04,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S45H I72M Y119I",3
"lib1","SARS-CoV-2","GTCTACAGAGAAGGAA",4,25.46,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V37N T46N V71E",3
"lib1","SARS-CoV-2","GTCTACATAGCTAGAC",5,69.08,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V32T A42V G86V N107E N157R",5
"lib1","SARS-CoV-2","GTCTACATATAGCCCA",3,57.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G9L R16K S41L K94Q A145R F160R F167C",7
"lib1","SARS-CoV-2","GTCTACATTTGTCTTT",8,78.29,9.5,-1.26,0.17,1.66,1.17,0.01,">1 nonsynonymous","G9R R16D P96H S129G",4
"lib1","SARS-CoV-2","GTCTACCAAAAAACAA",2,12.82,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","A14H A33Q L95K V103N",4
"lib1","SARS-CoV-2","GTCTACCAATCACGAG",5,73.23,10.7,-0.06,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCTACCCCATCAGTA",4,119.93,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y21R N110L R127L",3
"lib1","SARS-CoV-2","GTCTACCTACTCGTAG",5,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R N40R G166D",3
"lib1","SARS-CoV-2","GTCTACCTATCCCCAG",1,26.53,10.51,-0.25,0.09,2.96,1,0,">1 nonsynonymous","G83M K87T",2
"lib1","SARS-CoV-2","GTCTACGAAGTTTGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I104L Q163*",2
"lib1","SARS-CoV-2","GTCTACGCATCACTCT",2,11.16,10.71,-0.05,0.1,2.88,1.02,0.01,">1 nonsynonymous","T140S V173E",2
"lib1","SARS-CoV-2","GTCTACGTACTGTGTA",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S F167H R179A",3
"lib1","SARS-CoV-2","GTCTACTATGTATGGA",1,14.16,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","N118V P169Y V180F",3
"lib1","SARS-CoV-2","GTCTACTCATGGATAC",3,12.22,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49H G83D",2
"lib1","SARS-CoV-2","GTCTAGACATAAACTA",5,67.23,10.77,0,0.08,2.92,1.03,0,">1 nonsynonymous","D59N S129R",2
"lib1","SARS-CoV-2","GTCTAGACCTCGACCT",7,112.99,9.74,-1.02,0.12,2.32,1.07,0.01,">1 nonsynonymous","N40I G116A",2
"lib1","SARS-CoV-2","GTCTAGATTTCTTTCC",4,113.85,6,-4.76,1.92,3,1.12,0,">1 nonsynonymous","S41G N64L V71R R136S K198E",5
"lib1","SARS-CoV-2","GTCTAGCCGACGCGAA",1,16.36,10.73,-0.04,0.09,2.76,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTCTAGCGACACTTAG",2,8.7,6,-4.76,2,3,1.09,0.02,">1 nonsynonymous","P7Q A33V G86L G174L",4
"lib1","SARS-CoV-2","GTCTAGCGTTTTATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128A P177L",2
"lib1","SARS-CoV-2","GTCTAGCTGGCTACCG",4,111.51,7.26,-3.5,0.22,1.5,1.14,0.01,">1 nonsynonymous","C31K R127H",2
"lib1","SARS-CoV-2","GTCTAGCTGTAAGATG",4,0.96,NA,NA,NA,NA,NA,NA,"stop","N107P F156* Q163N",3
"lib1","SARS-CoV-2","GTCTAGGCATTTAAAT",2,77.85,10.74,-0.02,0.05,2.92,1.05,0,">1 nonsynonymous","K48T K198Y",2
"lib1","SARS-CoV-2","GTCTAGTCCCAAAGTG",7,66.63,10.12,-0.65,0.06,2.86,1,0,"1 nonsynonymous","G155Y",1
"lib1","SARS-CoV-2","GTCTAGTCGGACTTAA",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125G T140G",2
"lib1","SARS-CoV-2","GTCTATAAAACGTAAT",2,11.77,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A81L C102Y S139C",3
"lib1","SARS-CoV-2","GTCTATAAAGCAAACC",2,11.3,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S108E F160V Q176G",3
"lib1","SARS-CoV-2","GTCTATAACACTCCCT",5,9.7,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9C D68G V103D P169V",4
"lib1","SARS-CoV-2","GTCTATAATAAAGTTC",1,13.67,7.55,-3.22,0.42,1.61,1.25,0.05,">1 nonsynonymous","N64S I104K T201A",3
"lib1","SARS-CoV-2","GTCTATACTCTAGAAA",3,64.93,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","D34G G74E N92T I104W",4
"lib1","SARS-CoV-2","GTCTATAGGGCGTTGA",4,115.47,8.66,-2.1,0.09,2.45,1.13,0,">1 nonsynonymous","R73M G116S K132C V153E",4
"lib1","SARS-CoV-2","GTCTATATAACCCACT",2,10.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Y F17N Y143S",3
"lib1","SARS-CoV-2","GTCTATATACTCCTAC",3,35.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K56P G86V Y175V",3
"lib1","SARS-CoV-2","GTCTATATCACTATTC",7,1.56,NA,NA,NA,NA,NA,NA,"stop","Y35T K87M I104D L122W E135K Y143* C195S",7
"lib1","SARS-CoV-2","GTCTATATCATACGCA",3,123.37,10.59,-0.17,0.04,2.97,1,0,">1 nonsynonymous","S41R L187H S200W",3
"lib1","SARS-CoV-2","GTCTATATTAAAAATG",2,78.85,9.88,-0.88,0.11,2.41,1.06,0,">1 nonsynonymous","E10F Y39T G196C",3
"lib1","SARS-CoV-2","GTCTATATTCCTCCCC",1,9.47,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56M D68G K94V T100D V153I",5
"lib1","SARS-CoV-2","GTCTATCCTTATGTTG",7,110.97,10.72,-0.05,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTATCGATACCAAC",4,2.98,NA,NA,NA,NA,NA,NA,"stop","I2* V37T N64S G116L",4
"lib1","SARS-CoV-2","GTCTATCTGTCGGTCG",3,27.73,10.78,0.02,0.07,2.93,1.06,0,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","GTCTATGAAGATCGCC",3,77.06,10.41,-0.35,0.05,2.91,1.02,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","GTCTATGATCTGTCAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTCTATGCCGATCAAA",1,43.22,10.78,0.01,0.08,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCTATGGATTAATGT",2,42.07,10.43,-0.33,0.06,2.79,1.03,0,">1 nonsynonymous","T46A L162I",2
"lib1","SARS-CoV-2","GTCTATGGCGCATTTA",17,86.83,6.15,-4.62,0.71,1.5,1.2,0.02,">1 nonsynonymous","Y21E G83R I88E A192T",4
"lib1","SARS-CoV-2","GTCTATGTAAACACTA",3,129.03,10.76,0,0.05,2.89,1.06,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","GTCTATTAAACAGAAG",2,34.32,10.24,-0.52,0.06,2.85,1.08,0,">1 nonsynonymous","E76S L125S T201S",3
"lib1","SARS-CoV-2","GTCTATTATCCAAGCG",5,40.22,6,-4.76,1.56,1.5,1.15,0.01,">1 nonsynonymous","A14D N30K S45V K128G Y143V",5
"lib1","SARS-CoV-2","GTCTATTCATACCAAT",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S45L F62A D97S",4
"lib1","SARS-CoV-2","GTCTATTGATCCCTAT",1,46.28,10.79,0.03,0.11,2.76,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTATTGGACAGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* V103R",2
"lib1","SARS-CoV-2","GTCTATTTATCTAAAG",4,16.22,9.16,-1.6,0.4,1.95,1.39,0.07,"wildtype","",0
"lib1","SARS-CoV-2","GTCTATTTCATGACCT",12,194.98,9.57,-1.2,0.05,2.88,1.07,0,"1 nonsynonymous","T170N",1
"lib1","SARS-CoV-2","GTCTCAAAACCAACTA",12,197.87,10.76,0,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTCAAATGTATGAA",3,78.52,7.03,-3.73,0.18,1.67,1.1,0.01,">1 nonsynonymous","G146V G166I",2
"lib1","SARS-CoV-2","GTCTCAAGCCCACTTT",2,23.52,10.61,-0.16,0.08,2.88,1.03,0,">1 nonsynonymous","L5V T15L",2
"lib1","SARS-CoV-2","GTCTCAATATGAGTTC",3,114.09,7.65,-3.11,0.38,1.5,1,0.05,">1 nonsynonymous","D68L Q176R",2
"lib1","SARS-CoV-2","GTCTCAATTAATAGCC",1,15.33,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D34Y C49F D112Y R136S Q176Y",5
"lib1","SARS-CoV-2","GTCTCAATTCTTGTTG",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L V77S G86D S164Y",4
"lib1","SARS-CoV-2","GTCTCACATACGATCA",1,0.46,NA,NA,NA,NA,NA,NA,"stop","C61F F99S S139Q Y165* G196P",5
"lib1","SARS-CoV-2","GTCTCACCATGTTTTC",12,2.3,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","GTCTCACCGGAGTTAT",11,10.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1R T15P G86R",3
"lib1","SARS-CoV-2","GTCTCACCTCGTTGGG",3,24.02,10.09,-0.67,0.07,2.85,1.08,0,"1 nonsynonymous","C6G",1
"lib1","SARS-CoV-2","GTCTCACGAAAGTAAC",6,45.73,9.82,-0.95,0.17,2.47,1,0.01,">1 nonsynonymous","D98Y G152I A190E",3
"lib1","SARS-CoV-2","GTCTCACTGAGTACAA",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84N I104S",2
"lib1","SARS-CoV-2","GTCTCACTGTGTCATT",3,25.99,6,-4.76,2,2.58,1.19,0.02,">1 nonsynonymous","D90L F99G N107P G152D",4
"lib1","SARS-CoV-2","GTCTCAGATAGATTGG",1,55.21,8.76,-2.01,0.22,1.72,1.24,0.02,">1 nonsynonymous","D59G Y123N H189C",3
"lib1","SARS-CoV-2","GTCTCATAAAATATGA",6,2.26,NA,NA,NA,NA,NA,NA,"stop","R16L W106R Y119M I138* P149T L183V",6
"lib1","SARS-CoV-2","GTCTCATACATCACGG",4,90.97,10.49,-0.28,0.03,2.9,1.03,0,">1 nonsynonymous","S45G T201K",2
"lib1","SARS-CoV-2","GTCTCATGACACGCCA",2,13.88,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","T100P K132W T140S C150D N157V",5
"lib1","SARS-CoV-2","GTCTCATGCTATGAAG",13,90.04,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K87N C102S R124S L188D",4
"lib1","SARS-CoV-2","GTCTCATTACCGAAAG",6,24.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G86L L131W I142Y",3
"lib1","SARS-CoV-2","GTCTCATTGAGCCAGA",2,16.43,7.19,-3.58,0.39,1.5,1.25,0.04,">1 nonsynonymous","K87E D90S F167Y",3
"lib1","SARS-CoV-2","GTCTCATTTGCCCTAA",1,17.16,6,-4.76,1.58,1.5,1.16,0.01,">1 nonsynonymous","P82R T85M E154M",3
"lib1","SARS-CoV-2","GTCTCCAGGCATACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D90S Y175*",2
"lib1","SARS-CoV-2","GTCTCCCGCAGTCCTA",5,134.7,6.02,-4.75,0.78,1.5,1.17,0.01,">1 nonsynonymous","L57Y E76S P177T",3
"lib1","SARS-CoV-2","GTCTCCCTCTGGTATT",4,48.93,10.07,-0.69,0.11,2.61,1.01,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","GTCTCCGATCATTATT",2,6.12,10.78,0.02,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTCCGATCTCAATT",1,11.88,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","V103F V173L",2
"lib1","SARS-CoV-2","GTCTCCTTAAATTCAG",2,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C F99P A105L Y119G",4
"lib1","SARS-CoV-2","GTCTCGAGGAAACCCT",8,0.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107P",1
"lib1","SARS-CoV-2","GTCTCGAGTCTCAAGA",3,54.59,8.47,-2.29,0.2,1.83,1.11,0.01,">1 nonsynonymous","T15G V37T G152F N157G",4
"lib1","SARS-CoV-2","GTCTCGCAATGAAAAG",1,12.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34M N40A V181M",3
"lib1","SARS-CoV-2","GTCTCGCAATTGACCC",2,15.12,10.1,-0.67,0.23,2.09,1.12,0.02,">1 nonsynonymous","W106S I142V S184V",3
"lib1","SARS-CoV-2","GTCTCGGAGTGCCACC",4,60.31,10.19,-0.58,0.08,2.78,1.01,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","GTCTCGGGTAATAAAC",4,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I I142L",2
"lib1","SARS-CoV-2","GTCTCGTTACCGTTGG",6,90.35,8.35,-2.41,0.14,1.56,1.16,0.01,">1 nonsynonymous","Y35R G155V",2
"lib1","SARS-CoV-2","GTCTCTAAACTGCAAC",5,1.29,NA,NA,NA,NA,NA,NA,"stop","I28* Y119A P149L",3
"lib1","SARS-CoV-2","GTCTCTACATAAGTTA",4,18.89,6.19,-4.58,0.38,2.84,1.08,0.01,">1 nonsynonymous","S43L P177M",2
"lib1","SARS-CoV-2","GTCTCTAGCAACAGAC",2,18.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38T G117I E141G P149N S164Y Q176K",6
"lib1","SARS-CoV-2","GTCTCTCCTGGACAAT",1,12.68,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","T55G Y93L W106M C195G",4
"lib1","SARS-CoV-2","GTCTCTGAACCCCTTC",6,1.42,NA,NA,NA,NA,NA,NA,"stop","F8L S41* G83F K114A N120S G172M",6
"lib1","SARS-CoV-2","GTCTCTTACATATTGA",1,16.16,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D90T R179E T201L",3
"lib1","SARS-CoV-2","GTCTCTTCAACTCACT",2,36.88,10.56,-0.2,0.05,2.92,1.04,0,"1 nonsynonymous","R78L",1
"lib1","SARS-CoV-2","GTCTGAAAAAACTACA",2,59.94,10.68,-0.08,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTGAAAAATGCCAG",5,5.13,6.03,-4.73,0.83,3,1.09,0,"1 nonsynonymous","S43N",1
"lib1","SARS-CoV-2","GTCTGAAAACTAGACG",1,6.32,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F99R S113M L122N L131F L183T",5
"lib1","SARS-CoV-2","GTCTGAAACACAGATT",5,164.89,10.22,-0.55,0.04,2.95,1,0,">1 nonsynonymous","Y39V F126V",2
"lib1","SARS-CoV-2","GTCTGAAAGCGATTTT",5,144.31,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N92S E135N F167K",3
"lib1","SARS-CoV-2","GTCTGAAATTGTGTCC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16E V37D K94P R124S K198L",5
"lib1","SARS-CoV-2","GTCTGAACACCACATT",3,82.93,8.99,-1.77,0.08,2.77,1.1,0,">1 nonsynonymous","S43G G166R G196R",3
"lib1","SARS-CoV-2","GTCTGAAGTGCCACCT",3,138.01,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G146L Y175S",2
"lib1","SARS-CoV-2","GTCTGACTACACGCTA",1,3.93,NA,NA,NA,NA,NA,NA,"stop","R16G I28D N58Q S69* G86R A105N K114Y Y121P K128Y L162Q",10
"lib1","SARS-CoV-2","GTCTGAGACTCTAAAT",4,6.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15Q A81Q I88K G155E L162M A190D",6
"lib1","SARS-CoV-2","GTCTGAGCTTTTATAA",3,62.92,10.73,-0.04,0.1,2.88,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","GTCTGATTCCCTGGTG",9,25.25,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","I2Y A89R P96L V103A K114I",5
"lib1","SARS-CoV-2","GTCTGCAGGAAATAAA",2,6.65,6,-4.76,2,1.5,1.04,0.03,">1 nonsynonymous","N13S A42T P161L C195P",4
"lib1","SARS-CoV-2","GTCTGCATAAACCGAA",6,57.34,9.9,-0.86,0.11,2.5,1.14,0,">1 nonsynonymous","I28A A33T",2
"lib1","SARS-CoV-2","GTCTGCATACGGTGTA",4,67.18,9.72,-1.05,0.05,2.87,1.05,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","GTCTGCCAATGAGAAG",7,7,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","A33Y K48F Y91P V181T T201N",5
"lib1","SARS-CoV-2","GTCTGCCAATTACAAA",2,38.79,9.36,-1.41,0.17,1.78,1.16,0.01,">1 nonsynonymous","P7C K56M V65H",3
"lib1","SARS-CoV-2","GTCTGCCTAATTGTTG",2,50.31,9.2,-1.57,0.2,1.5,1.17,0.02,">1 nonsynonymous","I28N T55Y D90K T140R P197K",5
"lib1","SARS-CoV-2","GTCTGCGATCTAAAGA",3,17.19,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N4Q F62R Y121K Q168L S200Y",5
"lib1","SARS-CoV-2","GTCTGCGCCGCCATCT",1,5.67,6,-4.76,2,3,1.1,0,">1 nonsynonymous","D97R Y119I P149L G155F",4
"lib1","SARS-CoV-2","GTCTGCTATAGGAGCG",7,56.66,8.56,-2.2,0.12,2.59,1.05,0.01,">1 nonsynonymous","N120Q N157C H189S",3
"lib1","SARS-CoV-2","GTCTGCTATCTAATAC",13,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94R P149T",2
"lib1","SARS-CoV-2","GTCTGGAACAAAGAAC",4,43.75,10.77,0,0.07,2.91,1.05,0,">1 nonsynonymous","V115P P149Q",2
"lib1","SARS-CoV-2","GTCTGGAGAAACCATC",3,62.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9N C150F Y165T",3
"lib1","SARS-CoV-2","GTCTGGCAACGCTAAA",1,17.88,10.68,-0.09,0.06,2.93,1.04,0,"1 nonsynonymous","T140D",1
"lib1","SARS-CoV-2","GTCTGGCATTAGTGAC",1,10.01,6.67,-4.1,0.73,1.5,1.19,0.07,">1 nonsynonymous","I2S L38R K56R Y93R V103T",5
"lib1","SARS-CoV-2","GTCTGGCTATCTAAAA",9,153.64,10.39,-0.38,0.05,2.79,1.06,0,"1 nonsynonymous","R136V",1
"lib1","SARS-CoV-2","GTCTGGTACAATTTAT",8,84.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38G Y165R",2
"lib1","SARS-CoV-2","GTCTGGTCTGGTGGAA",1,10.08,NA,NA,NA,NA,NA,0.11,"wildtype","",0
"lib1","SARS-CoV-2","GTCTGTCAGTTCATCA",1,21.12,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G9T D97V V103G",3
"lib1","SARS-CoV-2","GTCTGTCCCTTACCTT",6,34.5,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N13C D90W C150I E154V Q176H",5
"lib1","SARS-CoV-2","GTCTGTGGCATAATCC",1,74.91,7.19,-3.57,0.18,1.97,1.1,0.01,">1 nonsynonymous","K132L P149L V153F Y175D",4
"lib1","SARS-CoV-2","GTCTGTGGTCATCAAA",1,17.62,8.81,-1.95,0.19,2.27,1.18,0.02,">1 nonsynonymous","G9L N120A I142C",3
"lib1","SARS-CoV-2","GTCTGTTAAGGGCTAA",3,30.32,10.59,-0.17,0.05,2.95,1,0,">1 nonsynonymous","N40M T100L",2
"lib1","SARS-CoV-2","GTCTGTTATAAAAATT",3,14.71,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y39R D98K E141L R179V",4
"lib1","SARS-CoV-2","GTCTTAAAAAATACTT",3,36.64,6.07,-4.7,1.12,1.5,1.16,0.03,">1 nonsynonymous","C49Y Y91G R127I Y159C S184T",5
"lib1","SARS-CoV-2","GTCTTAAAACAATCGG",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C A89V Q168S T201A",4
"lib1","SARS-CoV-2","GTCTTAAAGCCAAGAG",10,84.26,6.09,-4.67,0.8,1.5,1.19,0.02,">1 nonsynonymous","L5T R179S A190C",3
"lib1","SARS-CoV-2","GTCTTAAATAATTCTA",3,1.52,NA,NA,NA,NA,NA,NA,"stop","V37M D98* Q144M G174V P197R",5
"lib1","SARS-CoV-2","GTCTTAAATCTTTATT",5,1.03,NA,NA,NA,NA,NA,NA,"stop","K56P L60G K87* N120S G155D G174R",6
"lib1","SARS-CoV-2","GTCTTAACTCCGACTT",1,9.63,10.77,0.01,0.1,2.83,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTCTTAAGCACTAACA",4,7.19,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F17R T63F V115H D137A T201P",5
"lib1","SARS-CoV-2","GTCTTAATAACATAGC",6,55.66,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14L R78T L131R",3
"lib1","SARS-CoV-2","GTCTTAATAGAGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44T K114Q E154*",3
"lib1","SARS-CoV-2","GTCTTACCAAATCACC",5,16.71,9.87,-0.9,0.25,1.93,1.06,0.02,">1 nonsynonymous","T3L W106L",2
"lib1","SARS-CoV-2","GTCTTACTAGTTATTA",3,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K A42E C49R T100L Q176A",5
"lib1","SARS-CoV-2","GTCTTACTTTATCACT",14,152.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8K N107R Y143D",3
"lib1","SARS-CoV-2","GTCTTAGAAATTGTTG",1,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D P82S L183V",3
"lib1","SARS-CoV-2","GTCTTAGAAGTGGCTA",10,46.22,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L P82G N130M I138S F156C P197Q",6
"lib1","SARS-CoV-2","GTCTTAGATACAGTAC",1,18.81,10.73,-0.03,0.1,2.83,1.12,0.01,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","GTCTTAGTGTTTTAGT",5,97.18,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y121T N157L",2
"lib1","SARS-CoV-2","GTCTTATCCACTCGAT",2,99.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9S P82L N109D Y175N A190E K199V",6
"lib1","SARS-CoV-2","GTCTTATGTATATGCA",1,41.98,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P54S N92L S129L",3
"lib1","SARS-CoV-2","GTCTTATTGACTCAAT",3,39.54,6.74,-4.02,0.26,1.5,1.12,0.01,">1 nonsynonymous","Y35N D97F Y165H",3
"lib1","SARS-CoV-2","GTCTTCACAATTAAAT",4,71.16,7.02,-3.75,0.36,1.5,1.2,0.03,">1 nonsynonymous","I72M G83R Q144K",3
"lib1","SARS-CoV-2","GTCTTCAGCAATCATA",1,76.54,10.56,-0.2,0.03,2.93,1.01,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","GTCTTCCGGACCCATA",15,190.44,10.75,-0.01,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTCTTCCTAATAATAA",7,31.36,10.55,-0.21,0.06,2.92,1.03,0,"1 nonsynonymous","N30E",1
"lib1","SARS-CoV-2","GTCTTCGATCGCCACT",5,30.25,10.77,0,0.09,2.89,1.08,0,">1 nonsynonymous","T85R D97L",2
"lib1","SARS-CoV-2","GTCTTCGTAGTAACAA",1,7.6,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y66L A105L G116I",3
"lib1","SARS-CoV-2","GTCTTCTAGTGGCAAA",5,27.51,6,-4.76,2,2.69,1.19,0.01,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","GTCTTCTCCAAGCCAC",4,46.6,10.53,-0.24,0.08,2.79,1.03,0,"1 nonsynonymous","L60C",1
"lib1","SARS-CoV-2","GTCTTGAAAACGGCTA",2,10.49,9.7,-1.06,0.23,1.83,1.06,0.02,">1 nonsynonymous","G51P D59R",2
"lib1","SARS-CoV-2","GTCTTGAAGATTACAG",2,25.2,8.39,-2.37,0.18,2.56,1.09,0.01,"1 nonsynonymous","Y175L",1
"lib1","SARS-CoV-2","GTCTTGACGAATCTCA",3,38.59,8.72,-2.05,0.09,2.78,1.12,0,">1 nonsynonymous","Y143E S200P",2
"lib1","SARS-CoV-2","GTCTTGACGTACAGTG",6,54.18,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","A14I I28S Y35H F47S D97T S139W T201P",7
"lib1","SARS-CoV-2","GTCTTGACTTTTGCTA",6,121.18,10.07,-0.69,0.05,2.68,1.03,0,">1 nonsynonymous","N58L G83S",2
"lib1","SARS-CoV-2","GTCTTGCCAAGCTCGG",4,26.09,8.82,-1.94,0.32,1.5,1.09,0.04,">1 nonsynonymous","I28K V65L E154A",3
"lib1","SARS-CoV-2","GTCTTGCCCTGCAAGC",4,30.77,6.66,-4.1,0.29,1.5,1.11,0.01,">1 nonsynonymous","L5Q T46P V103K Y143H",4
"lib1","SARS-CoV-2","GTCTTGCGCCTCCGAC",1,13.3,8,-2.77,0.41,1.5,1.13,0.06,">1 nonsynonymous","L5V L95A",2
"lib1","SARS-CoV-2","GTCTTGGCTATATACT",2,21.02,9.18,-1.59,0.11,2.73,1.11,0.01,">1 nonsynonymous","N64Q Y119S G152T",3
"lib1","SARS-CoV-2","GTCTTGGGAATGATGA",3,10.64,8.74,-2.03,0.31,1.5,1,0.05,">1 nonsynonymous","S29L S43K V52S T85F",4
"lib1","SARS-CoV-2","GTCTTGGTTCAGGATT",3,14.7,10.3,-0.47,0.15,2.39,1.04,0.01,">1 nonsynonymous","L5T I104A L111F",3
"lib1","SARS-CoV-2","GTCTTGTTATAATGAG",7,27.38,9.12,-1.64,0.14,1.85,1.09,0.01,">1 nonsynonymous","N107T P149R T201F",3
"lib1","SARS-CoV-2","GTCTTGTTTAAGCACA",2,83.34,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T55L G152K P161F L188S",4
"lib1","SARS-CoV-2","GTCTTTATACAGCCGC",6,61.1,9.02,-1.74,0.19,2.12,1.14,0.01,">1 nonsynonymous","D90Y N120F S164G",3
"lib1","SARS-CoV-2","GTCTTTATCCTTGCTA",2,93.44,9.61,-1.16,0.15,1.64,1.18,0.01,">1 nonsynonymous","V37R A81L P149L",3
"lib1","SARS-CoV-2","GTCTTTCACATTCACA",2,9.92,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","I2T D98R P177C V182H",4
"lib1","SARS-CoV-2","GTCTTTGAAATAAATT",4,59.55,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y119R C150Q",2
"lib1","SARS-CoV-2","GTCTTTGCGGTCGAAA",7,3.06,NA,NA,NA,NA,NA,NA,"stop","K26L L38F K87* N120R F167L",5
"lib1","SARS-CoV-2","GTCTTTGTACAGAGCC",3,134.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90S N107S T140Q Y175R",4
"lib1","SARS-CoV-2","GTCTTTTAAAAATCCG",5,111.71,8.38,-2.38,0.12,2.82,1.07,0.01,"1 nonsynonymous","Y175C",1
"lib1","SARS-CoV-2","GTCTTTTACACCAAGC",1,32.45,10.66,-0.11,0.05,3,1,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","GTCTTTTACCATCATA",4,483.04,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","GTCTTTTAGCGTTATG",3,8.65,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","N1Q N24C S41P N58R I72K G86F I104D F134L",8
"lib1","SARS-CoV-2","GTCTTTTTACGTCATA",2,52.36,10.13,-0.63,0.08,2.81,1.01,0,">1 nonsynonymous","T63R W106Y",2
"lib1","SARS-CoV-2","GTCTTTTTAGTATGAT",3,15.79,9.12,-1.64,0.19,1.68,1.05,0.02,">1 nonsynonymous","F44A D90H S139N",3
"lib1","SARS-CoV-2","GTGAAAAAAAACGATT",2,23.52,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S41W F99S V173R",3
"lib1","SARS-CoV-2","GTGAAAAAATATAAAT",2,36.31,10.73,-0.04,0.07,2.89,1.02,0,"1 nonsynonymous","K128C",1
"lib1","SARS-CoV-2","GTGAAAAACACGTGAG",3,7.84,9.94,-0.83,0.52,1.5,1.02,0.07,">1 nonsynonymous","N13C A67Y K114M E141S",4
"lib1","SARS-CoV-2","GTGAAAAACGCCAGTT",6,131.99,9.9,-0.86,0.08,2.29,1.07,0,">1 nonsynonymous","T15G K128A S164F",3
"lib1","SARS-CoV-2","GTGAAAAAGAATATTA",10,112.14,10.22,-0.54,0.07,2.87,1,0,"1 nonsynonymous","Y35H",1
"lib1","SARS-CoV-2","GTGAAAAAGTAAGCAA",1,21.06,9.72,-1.05,0.17,2.24,1.11,0.01,">1 nonsynonymous","A81C N110S P169F",3
"lib1","SARS-CoV-2","GTGAAAAATCCAAAGT",7,46.84,9.39,-1.37,0.15,1.67,1.13,0.01,">1 nonsynonymous","T85R L95F",2
"lib1","SARS-CoV-2","GTGAAAAATGTGTAGC",6,45.97,8.15,-2.61,0.38,1.5,1.07,0.04,">1 nonsynonymous","T63M P96R S164Y",3
"lib1","SARS-CoV-2","GTGAAAACCTGTCCGC",1,15.41,9.48,-1.28,0.35,1.52,1.06,0.04,">1 nonsynonymous","K56M W106T N120F",3
"lib1","SARS-CoV-2","GTGAAAACGGGTGATA",5,35.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3N V11N D34F Y91G Y121L",5
"lib1","SARS-CoV-2","GTGAAAAGGCAATAGT",20,83.88,6,-4.76,1.11,1.5,1.12,0.01,">1 nonsynonymous","F17L N58P D98Y A105T",4
"lib1","SARS-CoV-2","GTGAAAAGTCGTACAT",4,15.34,9.97,-0.79,0.23,2.33,1.03,0.02,">1 nonsynonymous","R27S G83V",2
"lib1","SARS-CoV-2","GTGAAAATAACCTCAG",4,0.11,NA,NA,NA,NA,NA,NA,"stop","T55F C61E P96* R127*",4
"lib1","SARS-CoV-2","GTGAAAATGTAATGCC",1,65.8,10.27,-0.49,0.09,2.53,1.03,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","GTGAAACATATGTACA",4,61.87,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55N S69G K132M Y178I",4
"lib1","SARS-CoV-2","GTGAAACCAATAAGCA",5,3.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199L",1
"lib1","SARS-CoV-2","GTGAAACCAGAATAGC",1,9.92,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Y21E P161D",2
"lib1","SARS-CoV-2","GTGAAACCATCTACTA",1,23,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","V32E P161L G174E",3
"lib1","SARS-CoV-2","GTGAAACCCGCACTCA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","T3R G86*",2
"lib1","SARS-CoV-2","GTGAAACCGCTATAAA",8,72,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D34G K56W N92M N130T E135L",5
"lib1","SARS-CoV-2","GTGAAACCGGAATTAA",6,99.51,10.76,0,0.05,2.85,1.09,0,">1 nonsynonymous","L122G V173M",2
"lib1","SARS-CoV-2","GTGAAACGTAGGATCA",7,102.31,10.57,-0.2,0.05,2.94,1.01,0,">1 nonsynonymous","I2C V103I",2
"lib1","SARS-CoV-2","GTGAAACGTTATCTTC",3,124.95,10.68,-0.08,0.06,2.89,1.05,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","GTGAAACTCCTGAGGT",4,27.23,10.74,-0.03,0.08,2.92,1.04,0,"1 nonsynonymous","N40G",1
"lib1","SARS-CoV-2","GTGAAAGATACACCTG",5,43.74,8.36,-2.4,0.15,2.57,1.09,0.01,">1 nonsynonymous","S113Q C195L",2
"lib1","SARS-CoV-2","GTGAAAGATACAGTGA",1,3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTGAAAGATTTTTGAT",2,14.21,8.66,-2.1,0.23,2.93,1,0.02,">1 nonsynonymous","N64A S129E G166E",3
"lib1","SARS-CoV-2","GTGAAAGCCTTATTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33Y I88* S113F L162E",4
"lib1","SARS-CoV-2","GTGAAAGCGAACAAAG",4,7.89,9.99,-0.77,0.32,1.97,1.02,0.03,">1 nonsynonymous","A33S P96H",2
"lib1","SARS-CoV-2","GTGAAAGCGAGCCCCA",3,41.47,10.53,-0.24,0.3,1.9,1,0.06,">1 nonsynonymous","P7L A81R Q84P Y119F C150F N151E",6
"lib1","SARS-CoV-2","GTGAAAGTCTAACCGT",8,109.85,9.88,-0.89,0.1,2.63,1.03,0,">1 nonsynonymous","N64H N107A I142L T148S",4
"lib1","SARS-CoV-2","GTGAAATAGTTATTAC",10,69.19,10.71,-0.05,0.08,2.88,1.05,0,"1 nonsynonymous","E135D",1
"lib1","SARS-CoV-2","GTGAAATATCTAGGTT",4,84.78,10.68,-0.09,0.06,2.91,1.06,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","GTGAAATCATAGCAGG",1,38.74,10.79,0.03,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAAATGAGAAAAAG",2,40.94,9.2,-1.56,0.26,1.5,1,0.02,">1 nonsynonymous","F17T I104Y",2
"lib1","SARS-CoV-2","GTGAAATGAGAAATTC",4,32.99,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","P82W N120S",2
"lib1","SARS-CoV-2","GTGAAATTAATAAAAG",2,3.01,NA,NA,NA,NA,NA,NA,"stop","L5S K94C V103* S113R",4
"lib1","SARS-CoV-2","GTGAAATTAATGCGAG",8,57.4,10.76,-0.01,0.04,3,1.01,0,">1 nonsynonymous","A42R T55I T140S",3
"lib1","SARS-CoV-2","GTGAAATTAGTCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","T55K G86* W106A V182H",4
"lib1","SARS-CoV-2","GTGAAATTGGCGGCAA",2,7.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49R N107A S139R G146T",4
"lib1","SARS-CoV-2","GTGAACAAACAATTCT",7,53.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F47L L131R",2
"lib1","SARS-CoV-2","GTGAACAAACACGGTC",3,27.18,10.89,0.13,0.08,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAACAAAGGTTTCG",2,5.74,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","F44V Y91T T100R S139M Q144V",5
"lib1","SARS-CoV-2","GTGAACAACTGACTAT",2,34.98,8.61,-2.16,0.29,1.5,1.06,0.02,">1 nonsynonymous","V11I F44R A67S A89S V173E",5
"lib1","SARS-CoV-2","GTGAACAAGGTACCAA",5,98.36,9.76,-1.01,0.1,2.17,1.11,0,">1 nonsynonymous","P133I S139G",2
"lib1","SARS-CoV-2","GTGAACAATAGGAATA",2,81.52,10.48,-0.28,0.05,2.9,1.04,0,">1 nonsynonymous","I2S V32Y I138Y",3
"lib1","SARS-CoV-2","GTGAACACATATACGT",5,49.02,9.92,-0.84,0.13,2.35,1.03,0.01,">1 nonsynonymous","G9S A14V R27L F62W E141L",5
"lib1","SARS-CoV-2","GTGAACACATCAGCTG",7,77.45,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F12L S29R D68P P82T T170M",5
"lib1","SARS-CoV-2","GTGAACACGTTATCTA",3,25.93,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R25L Y50R Y119S F160P",4
"lib1","SARS-CoV-2","GTGAACAGACTGTATT",6,120.82,10.79,0.03,0.06,2.9,1.02,0,">1 nonsynonymous","I2L Y39G P197A",3
"lib1","SARS-CoV-2","GTGAACATAAACAGTA",7,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M I88V V103P L122S G172L",5
"lib1","SARS-CoV-2","GTGAACATACTGTATG",2,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69T A81R Q163N",3
"lib1","SARS-CoV-2","GTGAACATTAAGTCCA",3,13.1,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F70V V103H",2
"lib1","SARS-CoV-2","GTGAACATTGGTGACA",8,262.94,10.73,-0.04,0.06,2.92,1.05,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","GTGAACCACTGAACCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107W H189P",2
"lib1","SARS-CoV-2","GTGAACCAGGACGTTC",8,32.26,6.37,-4.39,0.76,1.5,1.14,0.02,">1 nonsynonymous","A42D T100D N107V",3
"lib1","SARS-CoV-2","GTGAACCTTACATCCA",6,23.44,6,-4.76,2,3,1.15,0,">1 nonsynonymous","E10F R16N G51H D137L",4
"lib1","SARS-CoV-2","GTGAACCTTTCATCTG",12,114.63,6,-4.76,1.6,1.5,1.17,0.01,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","GTGAACGAGACGTGAC",1,8.5,10.09,-0.67,0.22,2.72,1,0.01,">1 nonsynonymous","Y39F W106V",2
"lib1","SARS-CoV-2","GTGAACGATACAATAT",3,5.79,6,-4.76,2,1.5,1.07,0.04,">1 nonsynonymous","N40S G101F S139Q",3
"lib1","SARS-CoV-2","GTGAACGGAATGTTAC",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L K87S G117R L122S G152H",5
"lib1","SARS-CoV-2","GTGAACGTCGCTTTCA",11,1342.78,10.42,-0.35,0.03,2.87,1.03,0,">1 nonsynonymous","T100C I138W",2
"lib1","SARS-CoV-2","GTGAACTACTATTCTA",4,35.65,9.45,-1.32,0.22,1.5,1.14,0.02,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","GTGAACTGAGAAGCGA",1,10.49,9.86,-0.9,0.17,2.5,1.07,0.01,">1 nonsynonymous","F62L V173S",2
"lib1","SARS-CoV-2","GTGAACTGATAAAATT",6,111.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48W L95A R127L",3
"lib1","SARS-CoV-2","GTGAAGAACTGAATAG",9,48.83,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","GTGAAGAATTCCTGCT",6,135.66,10.72,-0.04,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAAGACACACAGCG",2,41.83,7.87,-2.89,0.27,1.5,1.1,0.05,">1 nonsynonymous","T15N F99L V103L K114L C158L V180D",6
"lib1","SARS-CoV-2","GTGAAGACCGATACCC",2,40.19,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","L131E T170P T201V",3
"lib1","SARS-CoV-2","GTGAAGACGTATATCA",10,33.55,6.1,-4.67,1.15,1.5,1.24,0.05,">1 nonsynonymous","N4R D98V V180R",3
"lib1","SARS-CoV-2","GTGAAGATCAAACGGT",1,20.97,8.22,-2.55,0.24,1.63,1.16,0.02,">1 nonsynonymous","T55L V77L Q84L L125Y C195F",5
"lib1","SARS-CoV-2","GTGAAGATCAATTTAA",9,123.93,9.72,-1.05,0.08,2.6,1.09,0,"1 nonsynonymous","Y165W",1
"lib1","SARS-CoV-2","GTGAAGATGGAGAGCC",4,51.36,9.36,-1.4,0.06,2.91,1.04,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","GTGAAGCACAGCATAT",8,233.87,8.7,-2.06,0.12,1.53,1.17,0.01,">1 nonsynonymous","F44E S53W N151P",3
"lib1","SARS-CoV-2","GTGAAGCACTACTAAT",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S L57F G86M",3
"lib1","SARS-CoV-2","GTGAAGCATGCACGGC",7,163.55,10.83,0.07,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAAGGAAGCACCAA",6,54.91,6.13,-4.63,0.55,1.5,1.11,0.01,">1 nonsynonymous","F12R W23K T63A N107S V173D",5
"lib1","SARS-CoV-2","GTGAAGGCTAACAACA",8,0.26,NA,NA,NA,NA,NA,NA,"stop","S19Y W106C Y121R P149S T170* K199W",6
"lib1","SARS-CoV-2","GTGAAGGGTTCAAAAA",4,20.48,7.58,-3.19,0.14,2.39,1.12,0.01,"1 nonsynonymous","C158A",1
"lib1","SARS-CoV-2","GTGAAGGTCAAGCAAG",10,45.39,6,-4.76,1.93,1.5,1.16,0.01,">1 nonsynonymous","C49N G152L",2
"lib1","SARS-CoV-2","GTGAAGTAGGTTCACC",3,25.04,6.78,-3.98,0.46,1.5,1.07,0.05,">1 nonsynonymous","N40C F126V I142R V173I",4
"lib1","SARS-CoV-2","GTGAAGTAGTCAATGT",6,163.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N130V Q176P",2
"lib1","SARS-CoV-2","GTGAAGTAGTCCTCCT",2,11.21,9.57,-1.2,0.08,2.7,1.06,0,">1 nonsynonymous","V52A Y121L S164N",3
"lib1","SARS-CoV-2","GTGAAGTCCCGACAGT",2,40.15,10.7,-0.06,0.07,2.85,1.09,0,">1 nonsynonymous","T140E S147Y S200H",3
"lib1","SARS-CoV-2","GTGAAGTCGCTGTATG",1,22.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L P177M",2
"lib1","SARS-CoV-2","GTGAAGTCGTTCATTT",9,100.24,10.3,-0.47,0.04,2.81,1.03,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","GTGAAGTGTACATAGT",7,145.03,10.15,-0.61,0.04,2.93,1.01,0,">1 nonsynonymous","C6S T201K",2
"lib1","SARS-CoV-2","GTGAAGTTAGATTGGG",2,9.39,10.69,-0.07,0.07,2.95,1.03,0,">1 nonsynonymous","N24H T201G",2
"lib1","SARS-CoV-2","GTGAAGTTTAATAGAC",4,51.87,8.45,-2.31,0.16,2.01,1.12,0.01,">1 nonsynonymous","C61N G83L D90S N107S Q163R",5
"lib1","SARS-CoV-2","GTGAATAAACCCTACT",5,20.32,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","V103R S113W",2
"lib1","SARS-CoV-2","GTGAATAAAGTTAGAG",3,36.23,9.5,-1.26,0.16,2.22,1.11,0.01,">1 nonsynonymous","A81E G155F",2
"lib1","SARS-CoV-2","GTGAATAAATAAGATC",2,92.17,10.81,0.04,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAATAAATTGACAA",5,115.41,10.8,0.03,0.06,2.9,1.05,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","GTGAATACAACGCCTA",3,2.46,NA,NA,NA,NA,NA,NA,"stop","V11A D98* N171F",3
"lib1","SARS-CoV-2","GTGAATACGTCCGTCT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","F12S N107T R127* S139T",4
"lib1","SARS-CoV-2","GTGAATAGGGAGGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87* Y121F F156C",3
"lib1","SARS-CoV-2","GTGAATATAATGGGAA",6,129.28,10.74,-0.02,0.07,2.91,1.07,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","GTGAATATCTAATAGT",2,23.35,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I88Q N130L P177W",3
"lib1","SARS-CoV-2","GTGAATATGTCATTCA",3,49.55,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F44L V65C I80G",3
"lib1","SARS-CoV-2","GTGAATATTGGTTCGC",1,10.33,9.71,-1.05,0.13,2.79,1.03,0.01,">1 nonsynonymous","G74K E154Q",2
"lib1","SARS-CoV-2","GTGAATCAACCATTTA",2,6.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H K87E",2
"lib1","SARS-CoV-2","GTGAATCACAACCTGT",11,241.73,10.39,-0.37,0.04,2.91,1.01,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","GTGAATCCAAAACTTA",5,0.8,NA,NA,NA,NA,NA,NA,"stop","R16* G83R V103A K132L Q144W K199N",6
"lib1","SARS-CoV-2","GTGAATCCCAAAAAAA",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L F62L N151H Y165N",4
"lib1","SARS-CoV-2","GTGAATCTATTTTCCG",5,38.55,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N58D V71S P96I K114T R127T",5
"lib1","SARS-CoV-2","GTGAATCTCTAAACGT",5,60.04,6.42,-4.34,0.72,1.5,1.22,0.04,">1 nonsynonymous","A22E Y121S N157S",3
"lib1","SARS-CoV-2","GTGAATGACACCTATT",1,9.28,6,-4.76,2,1.82,1.25,0.06,">1 nonsynonymous","T15L W23K Y35T",3
"lib1","SARS-CoV-2","GTGAATGATCTAGGAG",5,122.32,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","I2G Y39M S113C Y119V R127L P149Q",6
"lib1","SARS-CoV-2","GTGAATGTACAGACTT",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","GTGAATTAAACCCTAG",3,71.93,9.89,-0.87,0.07,2.9,1.05,0,">1 nonsynonymous","L5M G9S Y119K",3
"lib1","SARS-CoV-2","GTGAATTAGCAACTCT",2,60.29,10.66,-0.11,0.11,2.87,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTGAATTAGCCATAGT",1,16.45,9.12,-1.64,0.19,2.13,1.13,0.02,">1 nonsynonymous","R27T D34S E141K P169H",4
"lib1","SARS-CoV-2","GTGAATTCCTGTTGCG",7,30.44,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","A18M D59G S108P C158W P197V",5
"lib1","SARS-CoV-2","GTGAATTGATAGAATA",8,23.15,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","C6I C49L F99L",3
"lib1","SARS-CoV-2","GTGAATTGCAAATACT",4,33.97,6,-4.76,0.99,3,1.16,0,">1 nonsynonymous","N120F Y178P",2
"lib1","SARS-CoV-2","GTGAATTGCCATTGTG",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N T55S R127C G152S",4
"lib1","SARS-CoV-2","GTGAATTTACCAATTT",3,33.09,10.66,-0.1,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAATTTCGATGTCA",6,89.39,10.01,-0.75,0.05,2.96,1.01,0,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","GTGAATTTGCGGCGAT",5,59.28,8.14,-2.62,0.27,1.5,1.18,0.02,">1 nonsynonymous","D112S T193S",2
"lib1","SARS-CoV-2","GTGACAAAAAATGAGG",6,2.45,NA,NA,NA,NA,NA,NA,"stop","V37C F44M V103* L122Y",4
"lib1","SARS-CoV-2","GTGACAAAAACAGAAA",14,122.5,8,-2.77,0.24,1.68,1.17,0.02,"1 nonsynonymous","N157I",1
"lib1","SARS-CoV-2","GTGACAAACCACACAG",2,95.46,9.02,-1.74,0.1,2.2,1.18,0,">1 nonsynonymous","N40P K56R Y165H",3
"lib1","SARS-CoV-2","GTGACAAAGAAAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* C61Q Q84S D98C V103L N151P",6
"lib1","SARS-CoV-2","GTGACAACACGAACGG",7,169.52,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2V T85G L95P G101W V173S",5
"lib1","SARS-CoV-2","GTGACAACGCCGTTAA",3,3.04,NA,NA,NA,NA,NA,NA,"stop","V77G L95*",2
"lib1","SARS-CoV-2","GTGACAACGTAAATTA",6,73.98,8.04,-2.72,0.36,1.5,1,0.07,">1 nonsynonymous","F47D Q84Y",2
"lib1","SARS-CoV-2","GTGACAAGGCAATCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36M L95Q Y119W K128*",4
"lib1","SARS-CoV-2","GTGACAAGTCAAACCT",1,1.22,NA,NA,NA,NA,NA,NA,"stop","L5* Y93K F134K",3
"lib1","SARS-CoV-2","GTGACAATATAAACGT",3,7.25,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","N107L C158R",2
"lib1","SARS-CoV-2","GTGACAATGCTCCAAT",4,2.81,NA,NA,NA,NA,NA,NA,"stop","K56* K128M",2
"lib1","SARS-CoV-2","GTGACAATGTTTGGTA",1,20.89,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P7T L60S R127W T201G",4
"lib1","SARS-CoV-2","GTGACAATTCATACTG",7,123.81,6.54,-4.23,0.35,1.5,1.12,0.01,">1 nonsynonymous","F99T G166S",2
"lib1","SARS-CoV-2","GTGACACCACAATCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D34H D90V I142S",4
"lib1","SARS-CoV-2","GTGACACCATAAAACG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T15* V77W G155S S184P",4
"lib1","SARS-CoV-2","GTGACACGACATAGTC",5,3.88,NA,NA,NA,NA,NA,NA,"stop","T15L S19G N64* R73S G86F S139H",6
"lib1","SARS-CoV-2","GTGACACGGTGCAGAA",1,43.34,10.74,-0.02,0.06,2.89,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","GTGACACGTGAACCAA",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S L60Q F70I G196Y T201E",5
"lib1","SARS-CoV-2","GTGACACGTTGCTTCG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","F47* Q84L F99A",3
"lib1","SARS-CoV-2","GTGACAGAAAATCTTA",1,20.63,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I72Q A105L N110T Y121S",4
"lib1","SARS-CoV-2","GTGACAGAGTGCACAC",2,55.18,9.4,-1.37,0.1,2.79,1.12,0,">1 nonsynonymous","Y119L T201I",2
"lib1","SARS-CoV-2","GTGACATACTTTCTCT",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K V103P D137S",3
"lib1","SARS-CoV-2","GTGACATCGCACATCA",7,85.09,10.24,-0.52,0.06,2.89,1,0,">1 nonsynonymous","I2F D59P",2
"lib1","SARS-CoV-2","GTGACATGAAAAGTCG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","T3G G9N K48L N120*",4
"lib1","SARS-CoV-2","GTGACATTATATCAAA",17,258.42,8.27,-2.49,0.14,1.84,1.09,0.01,">1 nonsynonymous","D98F S113N N120H",3
"lib1","SARS-CoV-2","GTGACCAAAAGGTTCA",6,3.13,NA,NA,NA,NA,NA,NA,"stop","V52A L95*",2
"lib1","SARS-CoV-2","GTGACCAATACCTGGC",5,52.69,10.18,-0.59,0.05,2.91,1.04,0,">1 nonsynonymous","N120L G155R",2
"lib1","SARS-CoV-2","GTGACCACCCGGCATA",3,28.47,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N13V C31L T55V D75S A81H",5
"lib1","SARS-CoV-2","GTGACCAGACTCAGCA",12,163.83,10,-0.76,0.06,2.46,1.02,0,"1 nonsynonymous","I80M",1
"lib1","SARS-CoV-2","GTGACCAGCTTTATCG",2,47.49,8.15,-2.62,0.16,1.86,1.13,0.01,">1 nonsynonymous","Q84Y T170V",2
"lib1","SARS-CoV-2","GTGACCAGTTATTGCA",10,77.97,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S19K C61P G86T D90G",4
"lib1","SARS-CoV-2","GTGACCATAACTCCAT",1,42.54,6,-4.76,1.58,1.5,1.15,0.02,">1 nonsynonymous","G83S A89K N110M Y121R P169G A192E",6
"lib1","SARS-CoV-2","GTGACCATAGATTGGT",1,28.93,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","F44G L95A S147A",3
"lib1","SARS-CoV-2","GTGACCATGCTCTCAC",8,2.81,NA,NA,NA,NA,NA,NA,"stop","T15G S41* G51W N92A Y178I",5
"lib1","SARS-CoV-2","GTGACCCAATATTCAA",4,16.36,9.29,-1.48,0.11,1.78,1.16,0.01,">1 nonsynonymous","C6M N40R T55F S129I",4
"lib1","SARS-CoV-2","GTGACCCCCTACATTC",1,15.09,6,-4.76,2,3,1.12,0.03,">1 nonsynonymous","G86R G117R S129N I138H",4
"lib1","SARS-CoV-2","GTGACCCTGAAAGAAC",10,108.8,6.78,-3.99,0.3,1.5,1.13,0.01,">1 nonsynonymous","Y159K T201R",2
"lib1","SARS-CoV-2","GTGACCGCGAAATGGA",2,98.49,10.7,-0.06,0.08,2.86,1.01,0,">1 nonsynonymous","T85P T100M",2
"lib1","SARS-CoV-2","GTGACCGTAGAAAGTT",2,31.58,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N4P A22V I28A A105T R127W",5
"lib1","SARS-CoV-2","GTGACCTTCACATCAC",1,26.5,10.03,-0.73,0.2,2.04,1.04,0.01,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","GTGACCTTCATCCTGC",2,26.89,8.66,-2.11,0.1,2.8,1.14,0.01,">1 nonsynonymous","G117S A145T",2
"lib1","SARS-CoV-2","GTGACGAAGACGCGAA",2,11.16,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","I28V K56L V71Y D90W K94G D98V",6
"lib1","SARS-CoV-2","GTGACGACACCACATG",2,60.93,10.27,-0.5,0.06,2.85,1.02,0,">1 nonsynonymous","A81T N130H",2
"lib1","SARS-CoV-2","GTGACGATAATCATGA",5,53.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2S Y39I D68R V173E T201V",5
"lib1","SARS-CoV-2","GTGACGATAGAATAAC",1,5.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C Y50A W106G",3
"lib1","SARS-CoV-2","GTGACGATAGCAGAAT",3,59.8,10.69,-0.07,0.06,2.87,1.12,0,"1 nonsynonymous","T201D",1
"lib1","SARS-CoV-2","GTGACGCACAATTTAT",2,12.87,10.86,0.1,0.17,2.82,1.07,0.01,"1 nonsynonymous","I138L",1
"lib1","SARS-CoV-2","GTGACGCCACAATGGG",4,111.27,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12T R73H C150L",3
"lib1","SARS-CoV-2","GTGACGCCTAAGAAAA",3,73.7,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K56V I80E",2
"lib1","SARS-CoV-2","GTGACGGAACCACAAT",11,65.33,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","I80L D90F G116L L162S",4
"lib1","SARS-CoV-2","GTGACGGAGTAGAGAA",3,0.48,NA,NA,NA,NA,NA,NA,"stop","G86* V103F Q144R",3
"lib1","SARS-CoV-2","GTGACGGCTGGTAAAA",15,148.92,7.79,-2.97,0.12,1.5,1.14,0,"1 nonsynonymous","F167H",1
"lib1","SARS-CoV-2","GTGACGTACTTAACTT",1,26.82,6.1,-4.66,1.44,1.5,1.15,0.03,">1 nonsynonymous","T63M N130H Y175I V181L",4
"lib1","SARS-CoV-2","GTGACGTAGCCGATTA",3,35.55,6,-4.76,0.48,2.53,1.12,0,">1 nonsynonymous","K94I A145R V173R",3
"lib1","SARS-CoV-2","GTGACGTATTGATAAT",5,50.29,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T100E A105S Y143H Y175T",4
"lib1","SARS-CoV-2","GTGACGTCCGTTTATG",7,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S43Q S53P",3
"lib1","SARS-CoV-2","GTGACTACGATATCAT",3,86.45,10.65,-0.11,0.04,2.95,1.01,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","GTGACTAGAATATACC",2,10.36,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W106C Y119T V180Y",3
"lib1","SARS-CoV-2","GTGACTATAACGACTT",4,130.79,10.86,0.1,0.08,2.91,1.06,0,"1 nonsynonymous","V11I",1
"lib1","SARS-CoV-2","GTGACTATGAAATTAC",2,62.77,10.42,-0.35,0.04,2.94,1.01,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","GTGACTCAACATTGAC",5,25.77,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","L60K L95S",2
"lib1","SARS-CoV-2","GTGACTCCTTTCCTAA",8,255.35,10.15,-0.62,0.04,2.8,1.04,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","GTGACTGAGTTCGAAA",6,39.43,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P82M R179Y",2
"lib1","SARS-CoV-2","GTGACTGATAACATTA",14,109.35,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y93S Q168T",2
"lib1","SARS-CoV-2","GTGACTGGCCCTCATG",2,36.96,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","S19I K132D",2
"lib1","SARS-CoV-2","GTGACTTCGATTAATT",7,224.76,10.68,-0.09,0.03,2.92,1.03,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","GTGAGAAAATGAAGCA",10,194.27,10.04,-0.72,0.07,2.69,1.06,0,">1 nonsynonymous","C31Y N120R T201A",3
"lib1","SARS-CoV-2","GTGAGAAACCACCAAC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51E V77A",2
"lib1","SARS-CoV-2","GTGAGAAACGTTGATA",3,48.6,10.18,-0.58,0.04,2.88,1.01,0,">1 nonsynonymous","K48N G51S T55M I138L",4
"lib1","SARS-CoV-2","GTGAGAAAGCTTGCTG",12,129.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R16Q G51M K87S C158D T170A",5
"lib1","SARS-CoV-2","GTGAGAAAGTTACAAC",1,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E A89L D97S I138R",4
"lib1","SARS-CoV-2","GTGAGAAATAGCACCT",6,63.66,8.93,-1.83,0.22,1.5,1.15,0.02,">1 nonsynonymous","K94L L187Y",2
"lib1","SARS-CoV-2","GTGAGAACGTATGGTT",2,23.43,10.02,-0.75,0.08,2.67,1.04,0,">1 nonsynonymous","C61L E186I",2
"lib1","SARS-CoV-2","GTGAGAAGAATCAAAA",2,6.45,7.38,-3.39,0.37,1.5,1.08,0.03,">1 nonsynonymous","R25T N118I",2
"lib1","SARS-CoV-2","GTGAGAATAAGCACGA",4,24.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10T I104D K128L S200M",4
"lib1","SARS-CoV-2","GTGAGAATCAAGCCCG",1,27.37,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10C P82T S184C",3
"lib1","SARS-CoV-2","GTGAGAATCCCATAGG",2,64.96,10.15,-0.62,0.07,2.87,1.03,0,">1 nonsynonymous","A81E G174L",2
"lib1","SARS-CoV-2","GTGAGACAAAACCAGC",4,13.04,9.65,-1.11,0.25,1.5,1,0.02,">1 nonsynonymous","E76G Q84H",2
"lib1","SARS-CoV-2","GTGAGACCGACAATTT",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S P82S K87C V103C E135V",5
"lib1","SARS-CoV-2","GTGAGACCGACTGACA",2,37.5,10.94,0.17,0.1,2.86,1.04,0,">1 nonsynonymous","K87F Y123F",2
"lib1","SARS-CoV-2","GTGAGACCTACCTCTT",2,132.44,8.33,-2.44,0.17,1.91,1.11,0.01,">1 nonsynonymous","Y91H G117R V173R",3
"lib1","SARS-CoV-2","GTGAGACGGCTAGATT",4,8.71,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41F I104D",2
"lib1","SARS-CoV-2","GTGAGACGTGATAAAA",2,27.36,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G86S D112S",2
"lib1","SARS-CoV-2","GTGAGAGACGGTCCTA",2,16.09,10.4,-0.37,0.07,2.95,1.03,0,"1 nonsynonymous","A18V",1
"lib1","SARS-CoV-2","GTGAGAGCACCATGAA",1,34.1,10.77,0.01,0.11,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAGATAGGCAACGG",5,35.43,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C49W F62A G101A W106V V180C P197S",6
"lib1","SARS-CoV-2","GTGAGATCAAGAGTTT",4,30.83,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D59V E135V V173S T201L",4
"lib1","SARS-CoV-2","GTGAGATGAATCAAAG",5,2.6,NA,NA,NA,NA,NA,NA,"stop","G83D K128V Q168* T201R",4
"lib1","SARS-CoV-2","GTGAGATGACACGACC",1,5.98,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","I72N D90G T140Q T148N",4
"lib1","SARS-CoV-2","GTGAGATTGCCTGCAT",3,64.09,10.35,-0.41,0.08,2.77,1.05,0,">1 nonsynonymous","N30Y T140L",2
"lib1","SARS-CoV-2","GTGAGCAAACTAGACA",1,45.14,8.56,-2.21,0.09,2.97,1,0,">1 nonsynonymous","P149L N157M",2
"lib1","SARS-CoV-2","GTGAGCACAAAATATG",4,58.56,10.12,-0.65,0.07,2.21,1.07,0,">1 nonsynonymous","A14R Q79M",2
"lib1","SARS-CoV-2","GTGAGCACTTTGACCC",5,133.63,10.12,-0.65,0.08,2.37,1,0,">1 nonsynonymous","D90N F99M",2
"lib1","SARS-CoV-2","GTGAGCAGATACATCA",6,23.77,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","S41R L95K E141G",3
"lib1","SARS-CoV-2","GTGAGCAGGACTTTAG",1,29.17,9.5,-1.27,0.08,2.75,1.07,0,">1 nonsynonymous","T55F Y121V",2
"lib1","SARS-CoV-2","GTGAGCAGTCAACAAT",5,90.34,10.73,-0.04,0.1,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAGCATTCTATTTG",1,31.13,10.83,0.07,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAGCCAAAAGTATT",2,11.08,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","N24P N58T N107E T148V P169S",5
"lib1","SARS-CoV-2","GTGAGCCAACCCAAAC",5,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V D34Y P82R D98P V103H T201I",6
"lib1","SARS-CoV-2","GTGAGCCTACTCCCGA",2,15.55,10.23,-0.53,0.18,1.98,1.06,0.01,">1 nonsynonymous","R16W V77R",2
"lib1","SARS-CoV-2","GTGAGCGAAATATAGT",1,13.25,10.42,-0.35,0.09,2.81,1.05,0,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","GTGAGCGACACTGCAT",2,2.95,NA,NA,NA,NA,NA,NA,"stop","K56S P82* L95M W106Q R179L",5
"lib1","SARS-CoV-2","GTGAGCGTACCGTTTT",4,38.1,10.61,-0.15,0.11,2.9,1,0,">1 nonsynonymous","A33V P149S",2
"lib1","SARS-CoV-2","GTGAGCGTTCCGCATA",3,88.41,9.85,-0.92,0.04,2.9,1.05,0,"1 nonsynonymous","N171G",1
"lib1","SARS-CoV-2","GTGAGCTACGATCATA",1,64.86,10.68,-0.08,0.05,2.97,1.01,0,">1 nonsynonymous","Y35L S184A",2
"lib1","SARS-CoV-2","GTGAGGACATAACTTA",3,17.5,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","S43W S113L Y143S G152S",4
"lib1","SARS-CoV-2","GTGAGGATAGGAAAAG",2,82.76,8.88,-1.88,0.06,2.86,1.07,0,">1 nonsynonymous","K87F F126R",2
"lib1","SARS-CoV-2","GTGAGGATTACTCATC",7,58.91,6.16,-4.6,0.89,1.5,1.17,0.03,">1 nonsynonymous","A22C I28L S41P P96L G166M",5
"lib1","SARS-CoV-2","GTGAGGCACTGCCCAT",5,30.24,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","T15F T148V F167N T201W",4
"lib1","SARS-CoV-2","GTGAGGCATAAAACAG",11,141.53,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","A14Q V37D D90S A105L S139R S200M",6
"lib1","SARS-CoV-2","GTGAGGGCCAGATTAA",5,25.76,8.72,-2.05,0.22,1.5,1.16,0.02,">1 nonsynonymous","N4K D34A S43N R136N",4
"lib1","SARS-CoV-2","GTGAGGGTTAAACGTC",16,308.36,9.23,-1.54,0.06,2.49,1.11,0,">1 nonsynonymous","N13G F44Y G146T",3
"lib1","SARS-CoV-2","GTGAGGTACACATCCG",2,1.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","GTGAGGTTGAAGCGTA",12,215.95,9.69,-1.07,0.08,2.53,1.05,0,">1 nonsynonymous","D90Y P169Y",2
"lib1","SARS-CoV-2","GTGAGTAAAAGTTCAT",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V V37R",2
"lib1","SARS-CoV-2","GTGAGTAATTACAGCA",3,42.53,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L38T N64V T85D P133S F167L",5
"lib1","SARS-CoV-2","GTGAGTATAACAATTC",5,127.85,8.67,-2.09,0.1,2.9,1.04,0,">1 nonsynonymous","K87T N107S Y119T",3
"lib1","SARS-CoV-2","GTGAGTATTATTAATA",4,44.47,10.8,0.04,0.06,2.88,1.06,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","GTGAGTATTTGCGTTC",1,35.03,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6S I88H K114S A190H",4
"lib1","SARS-CoV-2","GTGAGTCAACCATACA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","N1V G51R D98P D137N N171*",5
"lib1","SARS-CoV-2","GTGAGTCCGAATCACA",2,29.64,10.5,-0.26,0.06,2.84,1.03,0,">1 nonsynonymous","S36N D98W",2
"lib1","SARS-CoV-2","GTGAGTCCGTAAGCGT",3,33.87,10.64,-0.12,0.05,2.92,1.04,0,">1 nonsynonymous","C61D K128V",2
"lib1","SARS-CoV-2","GTGAGTCGCGACACAA",6,125.44,9.88,-0.88,0.07,2.18,1.06,0,">1 nonsynonymous","F47S P149S",2
"lib1","SARS-CoV-2","GTGAGTCTATTATCAA",5,75.95,10.82,0.06,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGAGTCTGCAAATTC",8,36.35,9.52,-1.24,0.28,1.5,1,0.03,">1 nonsynonymous","T3V K94F E141T",3
"lib1","SARS-CoV-2","GTGAGTGAAGATGGCA",6,9.42,NA,NA,NA,NA,NA,NA,"stop","N58V T201*",2
"lib1","SARS-CoV-2","GTGAGTGGGACCTCTA",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M T55A Y119R",3
"lib1","SARS-CoV-2","GTGAGTGTCTAGAGAA",2,50.9,8.83,-1.94,0.18,1.59,1.2,0.01,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","GTGAGTTTTAATAGTG",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N H189S",2
"lib1","SARS-CoV-2","GTGAGTTTTCATAAAC",3,192.43,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","K87D F126S",2
"lib1","SARS-CoV-2","GTGAGTTTTCTTCATG",2,33.58,9.74,-1.03,0.29,1.62,1.05,0.04,">1 nonsynonymous","S108R L188M",2
"lib1","SARS-CoV-2","GTGAGTTTTTCCAGAT",5,136.78,10.71,-0.06,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGATAAAAAAGCCGA",6,9.71,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","A33V P82K Y93R",3
"lib1","SARS-CoV-2","GTGATAAATTAGAATC",1,19.43,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G86D N157V",2
"lib1","SARS-CoV-2","GTGATAACACAACGAA",4,13.67,6,-4.76,2,3,1.13,0,">1 nonsynonymous","Y35Q Y91Q A105M N120G L125V G174C T201S",7
"lib1","SARS-CoV-2","GTGATAACACACGCAA",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y I142F",2
"lib1","SARS-CoV-2","GTGATAACATGTGCCG",2,0.24,NA,NA,NA,NA,NA,NA,"stop","A42V R136* Y159I",3
"lib1","SARS-CoV-2","GTGATAAGGAGTAGAC",1,83.32,9.64,-1.13,0.05,2.81,1.1,0,">1 nonsynonymous","I2M Y119S",2
"lib1","SARS-CoV-2","GTGATAAGTAATGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82F D90P D98G L122F",4
"lib1","SARS-CoV-2","GTGATAATTCAAAACG",4,70.4,10.46,-0.3,0.05,2.98,1,0,">1 nonsynonymous","Y121L P197G",2
"lib1","SARS-CoV-2","GTGATACTCACAAACT",4,19.23,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","L60D P82D P96N",3
"lib1","SARS-CoV-2","GTGATAGCAATCTTTG",9,115.16,10.26,-0.5,0.05,2.79,1.03,0,">1 nonsynonymous","G83W S147L T201L",3
"lib1","SARS-CoV-2","GTGATATAACAGGACA",4,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V W106G",2
"lib1","SARS-CoV-2","GTGATATCAAGATAGC",2,14.05,9.28,-1.49,0.32,2.06,1.2,0.04,">1 nonsynonymous","T15I D90S D98H",3
"lib1","SARS-CoV-2","GTGATATGAAGATTCT",5,35.88,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6K D59T D90L P96M T148R G172A",6
"lib1","SARS-CoV-2","GTGATATGTAATATAC",2,32.37,10.23,-0.53,0.09,2.8,1.01,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","GTGATATTGCAGTGCT",1,27.1,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L38Y G74T D97Q P177G",4
"lib1","SARS-CoV-2","GTGATCAACCTAGCGG",5,106.29,8.64,-2.12,0.11,2.53,1.07,0.01,">1 nonsynonymous","Y123Q G146T S200W",3
"lib1","SARS-CoV-2","GTGATCAAGACGTAAA",4,40.51,8.38,-2.38,0.15,1.5,1.11,0.01,">1 nonsynonymous","N58S I80M I138S",3
"lib1","SARS-CoV-2","GTGATCAAGGCATCAA",9,57.04,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N30L S41W I80M F99V N157H S184H",6
"lib1","SARS-CoV-2","GTGATCAGACGTTATT",1,17.75,6,-4.76,2,2.37,1.27,0.01,">1 nonsynonymous","E10K S19L I80L F99Y Y119K T170F",6
"lib1","SARS-CoV-2","GTGATCAGATAAAATT",2,29.8,10.56,-0.2,0.06,2.96,1,0,">1 nonsynonymous","N58I Y91F",2
"lib1","SARS-CoV-2","GTGATCAGTTGAAGGG",9,121.15,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K87M G116L F126T Y178K",4
"lib1","SARS-CoV-2","GTGATCATACGCCATC",1,21.5,10.34,-0.43,0.17,2.56,1,0.02,">1 nonsynonymous","V52N T201L",2
"lib1","SARS-CoV-2","GTGATCATATTACAAA",3,18.32,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","Y123P",1
"lib1","SARS-CoV-2","GTGATCATGATTCGAT",3,34.88,9.32,-1.45,0.1,2.62,1.1,0,">1 nonsynonymous","N118S E135T",2
"lib1","SARS-CoV-2","GTGATCCAAAGGGATG",3,13.05,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","Y66N F99T P133S",3
"lib1","SARS-CoV-2","GTGATCCAAGCATAAC",10,39.16,8.78,-1.99,0.31,1.5,1.02,0.04,">1 nonsynonymous","F17L W106L V115T",3
"lib1","SARS-CoV-2","GTGATCCCAAAAACTG",10,86.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36K K87A A105D D112E L131Q",5
"lib1","SARS-CoV-2","GTGATCCCATTACACG",9,75.71,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","L95T E135Q G146S P161K",4
"lib1","SARS-CoV-2","GTGATCCCTACAACGA",1,20.79,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63G G83I G146Y",3
"lib1","SARS-CoV-2","GTGATCCTGGACGCCA",14,218.9,10.36,-0.41,0.03,2.95,1.01,0,"1 nonsynonymous","Y35S",1
"lib1","SARS-CoV-2","GTGATCGACAAATAAT",6,41.96,7.55,-3.21,0.29,1.5,1.11,0.02,">1 nonsynonymous","T100Y N107W",2
"lib1","SARS-CoV-2","GTGATCTTATAATATC",3,95.05,10.62,-0.15,0.04,2.93,1.02,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","GTGATGAAATTGTTAA",5,74.05,10.7,-0.06,0.05,2.9,1.04,0,"1 nonsynonymous","I138A",1
"lib1","SARS-CoV-2","GTGATGAAGACACGAT",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y165P",2
"lib1","SARS-CoV-2","GTGATGAATCCCGTTT",6,93.6,10.72,-0.04,0.04,2.98,1,0,"1 nonsynonymous","R136K",1
"lib1","SARS-CoV-2","GTGATGACAACTCAAA",5,25.82,10.42,-0.34,0.1,2.49,1,0,">1 nonsynonymous","T15S D98L S184G",3
"lib1","SARS-CoV-2","GTGATGACTCAGCCTG",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Q S139H P149Q F167C",4
"lib1","SARS-CoV-2","GTGATGAGAACTCTCT",2,58.01,10.08,-0.69,0.14,2.02,1.07,0.01,">1 nonsynonymous","N4V N120K S139V L187V",4
"lib1","SARS-CoV-2","GTGATGAGTATACAAG",2,8.81,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","D68P L125T T201Y",3
"lib1","SARS-CoV-2","GTGATGCATCATCACA",4,15.77,8.02,-2.74,0.34,1.5,1.04,0.05,">1 nonsynonymous","F47L G51V E141P K198M",4
"lib1","SARS-CoV-2","GTGATGCCAGACCACA",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F W23R G117C",3
"lib1","SARS-CoV-2","GTGATGCCCGAACATA",9,76.56,6,-4.76,1.25,1.5,1.26,0.02,">1 nonsynonymous","E10W P82R",2
"lib1","SARS-CoV-2","GTGATGCCCTTCACCA",4,35.38,10.18,-0.58,0.1,2.78,1.03,0,">1 nonsynonymous","V37F N107T",2
"lib1","SARS-CoV-2","GTGATGCCGCCAACTC",2,52.69,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G9W R127L Y175R",3
"lib1","SARS-CoV-2","GTGATGCGGAATTCTT",4,39.43,6,-4.76,1.76,1.5,1.15,0.03,">1 nonsynonymous","Y35A A42L T85Q L131E P149L",5
"lib1","SARS-CoV-2","GTGATGCGTATCATAT",3,1.68,NA,NA,NA,NA,NA,NA,"stop","A18E D68L D97N G117*",4
"lib1","SARS-CoV-2","GTGATGCTTAACTTGA",13,261.36,10.71,-0.06,0.06,2.91,1.06,0,"1 nonsynonymous","K198M",1
"lib1","SARS-CoV-2","GTGATGGCCATAAATT",5,77.52,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12L R16N A81C S139V Y143P S184K",6
"lib1","SARS-CoV-2","GTGATGGGAACTTTGG",1,8.88,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTGATGGGGATGAACC",1,41.68,10.72,-0.05,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGATTAAAGATCAAT",4,59.94,9.83,-0.93,0.17,1.93,1.05,0.01,">1 nonsynonymous","N13R K26W",2
"lib1","SARS-CoV-2","GTGATTAAGCATTCAT",8,127.93,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D90C C102Y T140K Y159I",4
"lib1","SARS-CoV-2","GTGATTAAGGCTCAGG",1,35.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L K56Q D97E G101V F160A",5
"lib1","SARS-CoV-2","GTGATTAATAAGCGGC",4,35.09,6.35,-4.41,0.59,1.5,1.3,0.03,">1 nonsynonymous","N30K K94Y N120M",3
"lib1","SARS-CoV-2","GTGATTACACCAGAAG",1,35.57,7.16,-3.61,0.31,1.5,1.12,0.02,">1 nonsynonymous","P54L N92E D97Q",3
"lib1","SARS-CoV-2","GTGATTACACCATTAG",5,89.63,10.25,-0.51,0.04,2.83,1.02,0,">1 nonsynonymous","I80L P149Q",2
"lib1","SARS-CoV-2","GTGATTAGCTCCCTTT",7,57.2,6,-4.76,2,1.5,1.41,0.06,">1 nonsynonymous","L5E V71Y",2
"lib1","SARS-CoV-2","GTGATTCAAAATCTAG",4,81.98,10.76,0,0.03,2.93,1.04,0,"1 nonsynonymous","Q163H",1
"lib1","SARS-CoV-2","GTGATTCAAATGAGAA",10,142.43,7,-3.77,0.21,1.5,1.16,0.01,">1 nonsynonymous","D112S L125G T201Y",3
"lib1","SARS-CoV-2","GTGATTCAGACACGAC",4,11.8,10.77,0.01,0.07,2.87,1.09,0,"1 nonsynonymous","F160A",1
"lib1","SARS-CoV-2","GTGATTCATAGTATTT",6,174.34,10.2,-0.57,0.05,2.8,1,0,">1 nonsynonymous","P7E S45V",2
"lib1","SARS-CoV-2","GTGATTCATGCTCTGA",3,30.05,10.75,-0.01,0.07,2.92,1,0,">1 nonsynonymous","G9P T100F",2
"lib1","SARS-CoV-2","GTGATTCTCTTCAATT",5,115.96,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","G83N V103D N171Y",3
"lib1","SARS-CoV-2","GTGATTGACAGAAATA",1,17.05,10.43,-0.34,0.14,2.79,1.01,0.01,">1 nonsynonymous","N1M T55L T63Y V173H",4
"lib1","SARS-CoV-2","GTGATTGAGACTTCCC",3,39.06,10.65,-0.11,0.07,2.86,1.09,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","GTGATTGAGCGAATCG",9,140.6,10.72,-0.04,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGATTGCCAACAGAG",4,98.85,8.67,-2.09,0.08,2.86,1.04,0,">1 nonsynonymous","L38F K56Y K87M L122M S129T T170F",6
"lib1","SARS-CoV-2","GTGATTGTAAGCGCTA",11,164.38,9.38,-1.39,0.07,2.75,1.11,0,">1 nonsynonymous","G9P V37N R73S",3
"lib1","SARS-CoV-2","GTGATTTCAATAGAAC",5,46.85,9.97,-0.79,0.11,2.3,1.02,0,">1 nonsynonymous","S41H L57C K114W",3
"lib1","SARS-CoV-2","GTGATTTGCGTTAAGC",2,54.18,9.71,-1.05,0.13,2.47,1.09,0.01,">1 nonsynonymous","Y121I E135G",2
"lib1","SARS-CoV-2","GTGATTTGGTAACGCT",1,21.07,10.15,-0.61,0.11,2.51,1.05,0.01,">1 nonsynonymous","T15Y P149M",2
"lib1","SARS-CoV-2","GTGCAAAAAACATAAT",1,0.54,NA,NA,NA,NA,NA,NA,"stop","G9* F17L D97R D137Q",4
"lib1","SARS-CoV-2","GTGCAAAAATTTATCG",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L G83F",2
"lib1","SARS-CoV-2","GTGCAAAACAACACGG",4,19.67,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","N130S F167E",2
"lib1","SARS-CoV-2","GTGCAAAATCAGATTA",3,7.61,9.61,-1.16,0.38,1.73,1.13,0.05,">1 nonsynonymous","S41F I88M",2
"lib1","SARS-CoV-2","GTGCAAAATTACCTAA",3,90.62,10.73,-0.03,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAAACCCAATTCT",3,9.98,6.01,-4.75,1.32,1.5,1.46,0.05,"1 nonsynonymous","R127W",1
"lib1","SARS-CoV-2","GTGCAAAGATGAATAG",10,26.05,7.85,-2.91,0.38,1.5,1.05,0.03,">1 nonsynonymous","D34F E76K A89R",3
"lib1","SARS-CoV-2","GTGCAAAGATGCGTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120V P177H S184W",3
"lib1","SARS-CoV-2","GTGCAAAGCATATATT",12,46.02,6.15,-4.61,1.12,1.5,1.2,0.04,">1 nonsynonymous","R27Q D34S V71Y S184R",4
"lib1","SARS-CoV-2","GTGCAAATAATAACCT",2,25.65,10.46,-0.31,0.07,2.97,1,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","GTGCAAATATTCAATA",3,62.89,10.54,-0.22,0.06,2.92,1.01,0,">1 nonsynonymous","F8L T140W",2
"lib1","SARS-CoV-2","GTGCAAATCACCCCTT",13,73.34,6,-4.76,1.8,1.5,1.25,0.04,">1 nonsynonymous","F44G V77N Y93D F99S",4
"lib1","SARS-CoV-2","GTGCAAATCGGTATCT",10,151.79,10.61,-0.16,0.04,2.93,1.05,0,">1 nonsynonymous","K56S F62S",2
"lib1","SARS-CoV-2","GTGCAAATCTGTGTCT",1,5.76,10.8,0.03,0.14,2.92,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAACACCAGAATT",8,120.39,10.84,0.07,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAACAGACCTGTC",8,104.46,10.02,-0.74,0.06,2.92,1.03,0,">1 nonsynonymous","S41T G152P Q168A",3
"lib1","SARS-CoV-2","GTGCAAGAATTAATAC",1,39.45,8.55,-2.22,0.13,1.82,1.15,0.01,">1 nonsynonymous","K114R P133F P161G",3
"lib1","SARS-CoV-2","GTGCAAGTATAGCAAT",7,65.33,10.19,-0.57,0.11,2.23,1.01,0,">1 nonsynonymous","D34N F44W I72T S200F",4
"lib1","SARS-CoV-2","GTGCAATACAAGCGTA",3,13.6,10.21,-0.55,0.09,2.91,1.11,0,">1 nonsynonymous","L5M K87L",2
"lib1","SARS-CoV-2","GTGCAATAGATAAGAA",20,170.46,6,-4.76,1.26,1.5,1.19,0.01,">1 nonsynonymous","Y21H F70G T140F T201S",4
"lib1","SARS-CoV-2","GTGCAATAGTTAACTA",3,60.69,10.04,-0.73,0.07,2.86,1.03,0,">1 nonsynonymous","A42F I142P K198L",3
"lib1","SARS-CoV-2","GTGCAATCAACATGTA",2,67.11,10.76,0,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAATCAAGCCTCT",2,0.25,NA,NA,NA,NA,NA,NA,"stop","D75S Y93* N107I S139M F167H",5
"lib1","SARS-CoV-2","GTGCAATGGCTAAAGT",1,24.9,10.48,-0.29,0.07,2.97,1,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","GTGCAATGTCTTGTCC",8,43.85,6,-4.76,2,1.97,1.13,0,">1 nonsynonymous","F44D P82E C158R",3
"lib1","SARS-CoV-2","GTGCACAAAAAATGGA",4,26.97,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A14L D98Q V103R G155S T201K",5
"lib1","SARS-CoV-2","GTGCACAAAGAAGTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L F8V T15L T148P",4
"lib1","SARS-CoV-2","GTGCACAAGAATAATG",3,35.46,10.86,0.09,0.07,2.84,1.11,0,">1 nonsynonymous","N64S P197K",2
"lib1","SARS-CoV-2","GTGCACAATTAAACGT",3,30.92,6.07,-4.7,1.48,1.5,1.25,0.05,">1 nonsynonymous","N4H A18E T55S Y91M G152T G172M P197S T201I",8
"lib1","SARS-CoV-2","GTGCACAATTCGAGCA",10,83.34,10.77,0.01,0.07,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGCACAATTTTAGAC",3,20.35,10.14,-0.62,0.08,2.91,1.05,0,">1 nonsynonymous","Y91K F160N",2
"lib1","SARS-CoV-2","GTGCACACAACTACGC",1,9.14,8.24,-2.52,0.14,2.01,1,0.01,">1 nonsynonymous","A22M F44R T170L",3
"lib1","SARS-CoV-2","GTGCACATCGAACTCA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","G166S P191*",2
"lib1","SARS-CoV-2","GTGCACATGCCGACTG",7,106.92,9.94,-0.82,0.04,2.87,1.03,0,">1 nonsynonymous","A22T L125S",2
"lib1","SARS-CoV-2","GTGCACCAAACCCCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15N P82* Q176H",3
"lib1","SARS-CoV-2","GTGCACCTGTCCTCAG",1,39.01,10.23,-0.53,0.08,2.74,1.06,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","GTGCACGCTTATCTGT",6,75.32,10.33,-0.43,0.03,2.89,1.03,0,">1 nonsynonymous","T3I L60T",2
"lib1","SARS-CoV-2","GTGCACGTAACAATAG",1,31.56,9.69,-1.07,0.05,2.91,1.01,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","GTGCACGTATTAGTCC",2,15.37,7.09,-3.67,0.47,1.5,1,0.05,">1 nonsynonymous","C6M Q176S G196S T201R",4
"lib1","SARS-CoV-2","GTGCACGTCTTCTAAC",3,38.9,10.71,-0.05,0.12,2.86,1.11,0.01,">1 nonsynonymous","S53V Q84S",2
"lib1","SARS-CoV-2","GTGCACTCAGATATGG",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M G83N",2
"lib1","SARS-CoV-2","GTGCACTGCGCAAAAA",1,36.23,10.16,-0.6,0.09,2.62,1.04,0,">1 nonsynonymous","F47Y P54S N64Y",3
"lib1","SARS-CoV-2","GTGCACTTCGACCCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","D98* N151* E154V T201N",4
"lib1","SARS-CoV-2","GTGCAGATAAGGGAAT",4,71.05,9.99,-0.77,0.12,2.25,1.04,0,">1 nonsynonymous","T3L W106M I142L T201V",4
"lib1","SARS-CoV-2","GTGCAGATCAAACTGG",4,15.71,6,-4.76,2,1.5,1.37,0.03,">1 nonsynonymous","R16V C49M E135L E154K T170L T201M",6
"lib1","SARS-CoV-2","GTGCAGCACATATTGA",1,88.15,10.71,-0.05,0.04,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAGCCTCCTTATT",6,120.6,7.52,-3.24,0.13,1.5,1.09,0.01,">1 nonsynonymous","I142H Y175E",2
"lib1","SARS-CoV-2","GTGCAGCGACTATACC",6,0.1,NA,NA,NA,NA,NA,NA,"stop","V11* F17L C61S",3
"lib1","SARS-CoV-2","GTGCAGCGGAATGCGG",4,55.39,9.2,-1.57,0.08,2.79,1.1,0,"1 nonsynonymous","N157G",1
"lib1","SARS-CoV-2","GTGCAGCTAACCATAG",2,14.57,10.09,-0.67,0.07,2.99,1,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","GTGCAGCTACGTGCAT",3,50.72,6,-4.76,1.56,1.5,1.2,0.02,">1 nonsynonymous","K132P Y143D G155T",3
"lib1","SARS-CoV-2","GTGCAGGTTTGACAAC",3,92.19,9.9,-0.87,0.1,2.28,1.05,0,">1 nonsynonymous","F8I A89V",2
"lib1","SARS-CoV-2","GTGCAGTGATGGACCT",3,66.03,10.92,0.16,0.1,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCAGTGTCAACCGG",1,36.02,9.47,-1.29,0.27,1.5,1,0.03,">1 nonsynonymous","N13G Y39R P133F S184F",4
"lib1","SARS-CoV-2","GTGCAGTTTGTGTATA",5,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Q V181R",2
"lib1","SARS-CoV-2","GTGCATACCAAGATCC",2,32.7,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","A14N A89L G152L",3
"lib1","SARS-CoV-2","GTGCATAGTTAAAGAC",2,3.41,NA,NA,NA,NA,NA,NA,"stop","T3D D34* D59K N110* L122W G146Y Q168Y",7
"lib1","SARS-CoV-2","GTGCATATTAAAGGTA",3,33.47,8.94,-1.82,0.24,1.5,1,0.02,">1 nonsynonymous","F8L Q84L W106L L122V",4
"lib1","SARS-CoV-2","GTGCATCAGGAACTTA",4,77.57,9.94,-0.82,0.05,2.9,1.04,0,">1 nonsynonymous","G116I F156I",2
"lib1","SARS-CoV-2","GTGCATCGCGTGGATT",2,99.98,10.75,-0.01,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCATCTATTGATAG",4,27.8,6.49,-4.28,0.74,1.5,1.2,0.04,">1 nonsynonymous","C6D G83V D97S I104M N120D",5
"lib1","SARS-CoV-2","GTGCATGAACAATTCT",7,50.2,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I28T T85R Y91H E135W",4
"lib1","SARS-CoV-2","GTGCATGAACATTAAA",8,84.7,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P7R D98L L131Q P177W",4
"lib1","SARS-CoV-2","GTGCATGAGAAATATC",2,23.46,6.13,-4.64,1.2,1.5,1.24,0.05,">1 nonsynonymous","L5V C61L L131R",3
"lib1","SARS-CoV-2","GTGCATGCCCGATTAG",6,80.27,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y91D G101L S139M",3
"lib1","SARS-CoV-2","GTGCATGTCAAGCCAC",6,111.31,9.96,-0.8,0.05,2.58,1.02,0,">1 nonsynonymous","T55W Y91A",2
"lib1","SARS-CoV-2","GTGCATGTTGGGGAAT",2,17.58,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Y35T D68E V103D",3
"lib1","SARS-CoV-2","GTGCATTAAAACACAA",2,20.49,10.84,0.08,0.1,2.91,1.06,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","GTGCATTTGGAAAATA",2,8.38,6,-4.76,2,3,1.26,0,">1 nonsynonymous","Y50N A81L",2
"lib1","SARS-CoV-2","GTGCATTTTAAGACAA",2,3.41,NA,NA,NA,NA,NA,NA,"stop","D75P T140* P149A",3
"lib1","SARS-CoV-2","GTGCCAAAAAGCACAC",5,14.55,8.44,-2.32,0.4,1.5,1,0.07,">1 nonsynonymous","C6R Y93F",2
"lib1","SARS-CoV-2","GTGCCAAAAGTGTGTA",6,124.83,10.17,-0.6,0.07,2.78,1.02,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","GTGCCAAAATTGGGGT",1,15.3,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A105H P161R",2
"lib1","SARS-CoV-2","GTGCCAACACACAGTA",1,11.26,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y143M T148S C158L",3
"lib1","SARS-CoV-2","GTGCCAACTACCCCAC",2,13.34,6,-4.76,2,3,1.12,0.04,">1 nonsynonymous","F17W C49M T140W T148F E154H P177M",6
"lib1","SARS-CoV-2","GTGCCAACTCCTACGA",7,24.98,8.15,-2.61,0.29,1.5,1.04,0.03,">1 nonsynonymous","K132V V181F",2
"lib1","SARS-CoV-2","GTGCCAAGGAAACCCT",3,11.11,6,-4.76,1.39,3,1.1,0,">1 nonsynonymous","D112T N157K",2
"lib1","SARS-CoV-2","GTGCCAAGTACATCAG",5,15.92,7.44,-3.33,0.45,1.5,1,0.06,">1 nonsynonymous","V103R K198E",2
"lib1","SARS-CoV-2","GTGCCACAACAATCAA",6,3.98,NA,NA,NA,NA,NA,NA,"stop","T55* F70S G83Q T148F L162K",5
"lib1","SARS-CoV-2","GTGCCACGGTCCTTTG",2,22.19,9.68,-1.08,0.13,2.88,1,0.01,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","GTGCCAGAGGACGGAC",4,7.19,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T55S D98C V182H S200R",4
"lib1","SARS-CoV-2","GTGCCAGATCCATCAT",5,107.71,6.46,-4.31,0.32,1.5,1.19,0.01,">1 nonsynonymous","K56I Y91Q K128Q G146S N171E",5
"lib1","SARS-CoV-2","GTGCCAGGTAGATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N W106N Q176V",3
"lib1","SARS-CoV-2","GTGCCATCCCAGACAC",2,25.37,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","Y91K V103N",2
"lib1","SARS-CoV-2","GTGCCATGAATGCTCT",9,77.9,9.66,-1.1,0.2,1.58,1.19,0.01,">1 nonsynonymous","N4R V77R N120W E154P",4
"lib1","SARS-CoV-2","GTGCCCAATACGCAAT",1,16.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S113F C158K",2
"lib1","SARS-CoV-2","GTGCCCATCTATTTTG",2,42.34,8.76,-2.01,0.13,1.93,1.16,0.01,">1 nonsynonymous","T85V N107M",2
"lib1","SARS-CoV-2","GTGCCCCAAAGGTAAC",1,11.12,8.56,-2.21,0.26,1.5,1.04,0.04,">1 nonsynonymous","K56R N92A N151F",3
"lib1","SARS-CoV-2","GTGCCCCTCGACACTG",3,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V Y39N G146Y P161R",4
"lib1","SARS-CoV-2","GTGCCCTGTTAATGCG",4,107.8,10.15,-0.61,0.04,2.95,1,0,">1 nonsynonymous","L5E F126V",2
"lib1","SARS-CoV-2","GTGCCCTTCACACCTC",4,19.51,7.13,-3.64,0.34,1.5,1.06,0.03,">1 nonsynonymous","K114L D137Y S200F",3
"lib1","SARS-CoV-2","GTGCCGAAGAACTGAT",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N C61T D90W I104F R127A F185Y",6
"lib1","SARS-CoV-2","GTGCCGACCACAAGCG",10,41.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5Q A22S T63L D90T D98I N118L",6
"lib1","SARS-CoV-2","GTGCCGATAAGAAGAA",4,28.48,6.59,-4.18,0.5,1.58,1.18,0.03,">1 nonsynonymous","V52F K87N Y165V P169H L183C",5
"lib1","SARS-CoV-2","GTGCCGCCCCATACCA",1,32.71,10.67,-0.09,0.08,2.86,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGCCGCTCAATTCGC",1,0.75,NA,NA,NA,NA,NA,NA,"stop","N4* P82M S129D T140N G166V",5
"lib1","SARS-CoV-2","GTGCCGGCCGTATGAT",8,2170.77,9.01,-1.75,0.05,2.86,1.07,0,">1 nonsynonymous","N30C L122Q A145Y",3
"lib1","SARS-CoV-2","GTGCCTAAACATCTCT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","N1D A42L I80* D98I",4
"lib1","SARS-CoV-2","GTGCCTAATTAAAGAA",1,11.95,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Y50D Y66E Q79L",3
"lib1","SARS-CoV-2","GTGCCTACATATACAG",7,2.46,NA,NA,NA,NA,NA,NA,"stop","L57Y D68E F126* E154D",4
"lib1","SARS-CoV-2","GTGCCTAGGAAGCCTC",2,12.42,9.8,-0.97,0.38,1.5,1.14,0.07,">1 nonsynonymous","N13P S41Y L60H F70A P191V",5
"lib1","SARS-CoV-2","GTGCCTCAAAAAACTG",2,10.43,10.12,-0.65,0.15,2.33,1,0.01,">1 nonsynonymous","V65W S147N F160V N171W",4
"lib1","SARS-CoV-2","GTGCCTCTACCCGGCA",6,9.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34F T55Y D90V D112Q P161W",5
"lib1","SARS-CoV-2","GTGCCTGAACCCCGAA",12,156.6,9.83,-0.94,0.07,2.61,1.07,0,">1 nonsynonymous","F17Y D97V F156S Q168W",4
"lib1","SARS-CoV-2","GTGCCTGAATTCTGTT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","V37D N64*",2
"lib1","SARS-CoV-2","GTGCCTGACGTCCGAG",5,46.14,10.79,0.02,0.08,2.91,1.07,0,">1 nonsynonymous","L60I L122M Q163L",3
"lib1","SARS-CoV-2","GTGCCTGCATTTAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","N92R Y121C N151L A190*",4
"lib1","SARS-CoV-2","GTGCCTTCGTATTGGA",6,73.7,9.41,-1.36,0.22,1.82,1.11,0.02,">1 nonsynonymous","S45P Y178L",2
"lib1","SARS-CoV-2","GTGCCTTGGGTTATTG",1,6.34,10.92,0.16,0.13,3,1.02,0,"1 nonsynonymous","L188V",1
"lib1","SARS-CoV-2","GTGCGAACTCGAACGT",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R F44T Y178F",3
"lib1","SARS-CoV-2","GTGCGAATCTACGATT",3,23.86,10.06,-0.7,0.16,1.55,1.07,0.02,">1 nonsynonymous","S43D L131S",2
"lib1","SARS-CoV-2","GTGCGACGGAGAAATA",2,14.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56T P82S N110P G146L",4
"lib1","SARS-CoV-2","GTGCGAGGCTTTAGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9K D90S D97A P161W Y175F K199*",6
"lib1","SARS-CoV-2","GTGCGATAAAGAACCT",4,52.67,10.83,0.06,0.09,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCGATACGGCCATC",5,0,NA,NA,NA,NA,NA,NA,"stop","L95* T140N",2
"lib1","SARS-CoV-2","GTGCGATTCTACTCAA",3,50.78,6,-4.76,2,2.82,1.21,0,">1 nonsynonymous","C49E D98C",2
"lib1","SARS-CoV-2","GTGCGCACAATTGACA",4,55.08,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N30R F44Y Y121D Y143R",4
"lib1","SARS-CoV-2","GTGCGCCACAGTTTTC",4,25.35,6.49,-4.27,0.2,2.43,1.1,0,">1 nonsynonymous","D59Q P96H C158S",3
"lib1","SARS-CoV-2","GTGCGCCCCAGATACC",2,0.82,NA,NA,NA,NA,NA,NA,"stop","F8V Q84S F99*",3
"lib1","SARS-CoV-2","GTGCGCCCTACAGAGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34G C49F G86S G146T N157V K198M",6
"lib1","SARS-CoV-2","GTGCGCTAAAGAAAAC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","W106K G116* E135T T170K",4
"lib1","SARS-CoV-2","GTGCGGACACCATTCA",6,50.21,7.14,-3.62,0.25,1.5,1.14,0.01,">1 nonsynonymous","V11F Y39S Y121L G166C",4
"lib1","SARS-CoV-2","GTGCGGCAACCGCCGC",10,365.59,8.22,-2.55,0.16,1.63,1.12,0.01,"1 nonsynonymous","Y165E",1
"lib1","SARS-CoV-2","GTGCGGCTCATAAATT",3,1.76,NA,NA,NA,NA,NA,NA,"stop","N4F A42G K56*",3
"lib1","SARS-CoV-2","GTGCGGCTCTATGTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T V71H D90C P149S T170R",5
"lib1","SARS-CoV-2","GTGCGGCTCTTGGGAA",2,23.24,7.83,-2.93,0.25,1.5,1.16,0.04,">1 nonsynonymous","G9P S19M T55I V115R",4
"lib1","SARS-CoV-2","GTGCGGGACTGTCGAA",5,83.13,10.04,-0.73,0.05,2.69,1.03,0,">1 nonsynonymous","E76F S184V",2
"lib1","SARS-CoV-2","GTGCGTAACCGCAGAA",15,300.47,10.04,-0.73,0.04,2.88,1.03,0,"1 nonsynonymous","R73Q",1
"lib1","SARS-CoV-2","GTGCGTAACTGCCTAA",1,13.63,10.96,0.2,0.16,2.78,1.16,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTGCGTGTTTAGGAAT",1,9.42,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N4M G86M F126W G146V",4
"lib1","SARS-CoV-2","GTGCGTTGCAGGCCGA",5,24.93,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N92T T201V",2
"lib1","SARS-CoV-2","GTGCTAAAAGGAGCTA",3,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S F62N N130Y Y143S",4
"lib1","SARS-CoV-2","GTGCTAAACGCAAGTC",4,3.54,NA,NA,NA,NA,NA,NA,"stop","K87V F167T N171*",3
"lib1","SARS-CoV-2","GTGCTAAACTAAAAGG",3,65.71,10.8,0.03,0.08,2.93,1.03,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","GTGCTAAATTAAACAA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","E141D P149*",2
"lib1","SARS-CoV-2","GTGCTAAATTGAACCA",8,124.68,10.69,-0.08,0.04,2.92,1.05,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","GTGCTAAATTTCAGTA",1,14.03,10.52,-0.25,0.09,2.94,1.02,0,">1 nonsynonymous","D97Y E141S",2
"lib1","SARS-CoV-2","GTGCTAACTCATCGAC",1,16.63,10.88,0.11,0.1,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCTAAGAGAATAAT",4,104.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N40A G83T Y91A V153D F167V",5
"lib1","SARS-CoV-2","GTGCTAAGTACTCTAG",5,0.11,NA,NA,NA,NA,NA,NA,"stop","D34P T46* L57V G83M C150N",5
"lib1","SARS-CoV-2","GTGCTAAGTGCGTTTT",3,38.53,8.71,-2.06,0.18,1.75,1.11,0.01,">1 nonsynonymous","A81V I138T G155I",3
"lib1","SARS-CoV-2","GTGCTAAGTTCAACAA",7,62.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A42S N64V Y143S L162Q F167Y Y175M",6
"lib1","SARS-CoV-2","GTGCTAATAACCATCG",3,63.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E N58S P82N",3
"lib1","SARS-CoV-2","GTGCTACAATAAGCCA",12,141.04,9.35,-1.41,0.14,1.74,1.14,0.01,">1 nonsynonymous","N64T A105L",2
"lib1","SARS-CoV-2","GTGCTACGAATCCCTT",1,13.28,10.48,-0.28,0.27,2.11,1.01,0.02,">1 nonsynonymous","N13V N110K T148M K198T",4
"lib1","SARS-CoV-2","GTGCTAGATGCCAAAA",6,71.6,8.26,-2.5,0.21,1.5,1.09,0.02,">1 nonsynonymous","F8S Y35R C61V",3
"lib1","SARS-CoV-2","GTGCTAGGAGACAGGT",5,50.38,8.66,-2.11,0.1,2.59,1.07,0,">1 nonsynonymous","I2E K56Q L122G F126S P149T",5
"lib1","SARS-CoV-2","GTGCTAGTTAGTAAAT",9,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C R136D",2
"lib1","SARS-CoV-2","GTGCTAGTTCCTCAAC",3,25.55,6.11,-4.66,1.49,1.5,1.29,0.04,">1 nonsynonymous","V65K R127I C195Y T201M",4
"lib1","SARS-CoV-2","GTGCTATAAAGAAAAT",4,87.32,10.7,-0.06,0.05,2.91,1.03,0,"1 nonsynonymous","P54E",1
"lib1","SARS-CoV-2","GTGCTATATGGGGAAT",4,34.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Q79L L125V F167G G174L",4
"lib1","SARS-CoV-2","GTGCTATCACGGCCAT",4,34.94,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F44N C61D P96Q S113R Y121D R136N",6
"lib1","SARS-CoV-2","GTGCTATCACTGTTAA",7,40.27,8.82,-1.95,0.21,1.81,1.17,0.02,">1 nonsynonymous","K114S F167L",2
"lib1","SARS-CoV-2","GTGCTATGTTATCCAA",3,20.28,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V103R C150V G174W",3
"lib1","SARS-CoV-2","GTGCTATTTGCACTTC",2,65.74,6.16,-4.61,0.78,1.5,1.21,0.02,">1 nonsynonymous","C6M D59R Y119C Q163L",4
"lib1","SARS-CoV-2","GTGCTCAACTTGTCAA",2,64.79,10.3,-0.46,0.05,2.89,1.02,0,">1 nonsynonymous","I2N N171C",2
"lib1","SARS-CoV-2","GTGCTCAATAAGAACC",6,18.12,9.27,-1.5,0.09,2.7,1.18,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","GTGCTCATACGCTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L122V G166*",2
"lib1","SARS-CoV-2","GTGCTCATTATCTATC",1,0,NA,NA,NA,NA,NA,NA,"stop","N30P D90* D97R Y175M",4
"lib1","SARS-CoV-2","GTGCTCATTATTGGGT",3,79.8,10.81,0.04,0.05,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGCTCCAATAGCCTA",1,20.97,10.75,-0.01,0.05,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGCTCCCATCAACTA",5,93.9,8.01,-2.75,0.14,1.77,1.14,0.01,">1 nonsynonymous","C61W T85L N120P",3
"lib1","SARS-CoV-2","GTGCTCCTAACTTCTG",1,4.08,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTGCTCGAACCCGTCT",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H G86K E141G S147A A190G",5
"lib1","SARS-CoV-2","GTGCTCGAGATTTATT",3,32.2,8.68,-2.08,0.38,1.5,1,0.08,">1 nonsynonymous","Y93R Y119L",2
"lib1","SARS-CoV-2","GTGCTCGCCAAATATG",1,12.62,9.97,-0.8,0.1,2.94,1,0,">1 nonsynonymous","N109V V115Y F126V V173I",4
"lib1","SARS-CoV-2","GTGCTCGCTAAGAAAG",1,30.35,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S36M S45M P169T Y178E F185R",5
"lib1","SARS-CoV-2","GTGCTCTAACCCAATA",1,276.59,9.34,-1.42,0.08,2.63,1.07,0,">1 nonsynonymous","V32A S45N Y91F N118D T201V",5
"lib1","SARS-CoV-2","GTGCTCTGCCGGCTGC",7,260.61,9.93,-0.84,0.03,2.87,1.02,0,">1 nonsynonymous","K56V P149M E154I",3
"lib1","SARS-CoV-2","GTGCTCTTATATTATC",7,234.24,10.41,-0.35,0.04,2.9,1.02,0,">1 nonsynonymous","F8L R136L",2
"lib1","SARS-CoV-2","GTGCTGAAGATTTTTT",1,1.29,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","GTGCTGACCGGTCCTA",4,89.86,9.94,-0.82,0.11,2.08,1.05,0,">1 nonsynonymous","F47V K56W D97P",3
"lib1","SARS-CoV-2","GTGCTGACTGGCGATT",3,69.03,9.96,-0.8,0.1,2.41,1.04,0,">1 nonsynonymous","Y35K S184A",2
"lib1","SARS-CoV-2","GTGCTGAGCCGAAGTG",12,183.89,8.09,-2.68,0.23,1.5,1.08,0.02,">1 nonsynonymous","G51P N120F",2
"lib1","SARS-CoV-2","GTGCTGCAACTAAGAT",10,25.11,7.12,-3.65,0.32,2.13,1.11,0.02,">1 nonsynonymous","V11D S41F V115S R127S F134I T201N",6
"lib1","SARS-CoV-2","GTGCTGCATATATTAT",6,62.33,9.54,-1.23,0.1,1.77,1.1,0,">1 nonsynonymous","G86A S139T",2
"lib1","SARS-CoV-2","GTGCTGCCATGTGTAT",2,29.9,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5C S29W F126V N157R",4
"lib1","SARS-CoV-2","GTGCTGGATAATTCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* G83D K87G P96G L122S",5
"lib1","SARS-CoV-2","GTGCTGTCCACTCACG",3,34.54,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K87S L95R Y123H",3
"lib1","SARS-CoV-2","GTGCTTAGAAATCAAC",5,183.88,9.96,-0.8,0.09,2.42,1.07,0,">1 nonsynonymous","N1L Y35R V153S",3
"lib1","SARS-CoV-2","GTGCTTATCAGAATTA",9,163.07,10.55,-0.21,0.05,2.94,1,0,"1 nonsynonymous","G9I",1
"lib1","SARS-CoV-2","GTGCTTCACCACGACA",5,82.29,10.27,-0.49,0.07,2.85,1.01,0,"1 nonsynonymous","E10W",1
"lib1","SARS-CoV-2","GTGCTTCCACCGGATC",1,22.75,10.72,-0.04,0.08,2.92,1,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","GTGCTTCGAGTCACAT",6,82.51,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G101S N107P",2
"lib1","SARS-CoV-2","GTGCTTGAAAGCCGAC",1,8.64,10.32,-0.45,0.12,2.84,1.15,0.01,">1 nonsynonymous","F160P H189Y",2
"lib1","SARS-CoV-2","GTGCTTGCGAACCCAA",1,18.4,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P96I E135L",2
"lib1","SARS-CoV-2","GTGCTTGGAAAGCGAA",3,69.42,10.69,-0.08,0.06,2.95,1.02,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","GTGCTTGGTTTAGCCG",9,69.72,7.61,-3.15,0.34,1.5,1.07,0.04,">1 nonsynonymous","A22F R136N E141N",3
"lib1","SARS-CoV-2","GTGCTTTAGCAGTTCG",1,14,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","A33R N120K K128H G172T",4
"lib1","SARS-CoV-2","GTGCTTTCGAAAATAC",4,43.1,10.59,-0.18,0.06,2.93,1,0,">1 nonsynonymous","T55D A81K",2
"lib1","SARS-CoV-2","GTGCTTTCGTCTAAAG",7,0.38,NA,NA,NA,NA,NA,NA,"stop","F12A W23A A33* T63V",4
"lib1","SARS-CoV-2","GTGCTTTGTTAACAAA",3,74.62,10.76,-0.01,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGGAAAAAGCTTACA",3,45.11,10.74,-0.03,0.05,3,1,0,"1 nonsynonymous","T140V",1
"lib1","SARS-CoV-2","GTGGAAAGTAATGGAC",4,9.89,9.01,-1.75,0.32,1.5,1.04,0.05,"1 nonsynonymous","G86R",1
"lib1","SARS-CoV-2","GTGGAAATCTTGGATT",7,40.64,9.58,-1.18,0.18,1.67,1.13,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","GTGGAAATGCAGTAAG",1,12.09,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","C6S V103H P177S",3
"lib1","SARS-CoV-2","GTGGAAGATATTGCTA",14,124.3,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G101M R179Q",2
"lib1","SARS-CoV-2","GTGGAAGGTCTTGCAA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S D90E Y91E",3
"lib1","SARS-CoV-2","GTGGAAGGTTTGATAT",1,36.63,10.62,-0.15,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGGAAGTTGGGTTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","A22* S69K A81T P149I",4
"lib1","SARS-CoV-2","GTGGACAAAGCCCAAA",1,11.05,10.13,-0.63,0.08,2.9,1,0,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","GTGGACAAATATGGTG",10,2.16,NA,NA,NA,NA,NA,NA,"stop","V11D K56L G86M D98M N120S Q144*",6
"lib1","SARS-CoV-2","GTGGACAAATCAGCTA",7,54.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63G R127T G146R N171M",4
"lib1","SARS-CoV-2","GTGGACACTGAGAATT",2,0.34,NA,NA,NA,NA,NA,NA,"stop","K56S N92* Y121S",3
"lib1","SARS-CoV-2","GTGGACAGTGAACCGG",5,5.01,NA,NA,NA,NA,NA,NA,"stop","A14S D34* L122G",3
"lib1","SARS-CoV-2","GTGGACATAAATTCCC",1,39.65,9.37,-1.4,0.11,1.82,1.11,0,">1 nonsynonymous","G9V A42K C102V",3
"lib1","SARS-CoV-2","GTGGACCCACCAAACG",3,27.74,9.75,-1.01,0.14,2.53,1.1,0.01,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","GTGGACCCATATCAGC",1,13.1,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F47A I80E",2
"lib1","SARS-CoV-2","GTGGACCCTATTTACA",1,52.92,10.7,-0.06,0.05,2.93,1.02,0,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","GTGGACCTCGTACAGG",1,41.01,6.54,-4.23,0.44,1.5,1.14,0.03,">1 nonsynonymous","F44D D137G G146S",3
"lib1","SARS-CoV-2","GTGGACGATCATAGAC",4,78.99,10.14,-0.63,0.05,2.83,1.01,0,">1 nonsynonymous","C31A T148V",2
"lib1","SARS-CoV-2","GTGGACGATTACTGCA",3,59.39,10.48,-0.28,0.05,2.82,1,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","GTGGACGTACTTAACT",4,0,NA,NA,NA,NA,NA,NA,"stop","R16M I28Q V52* V71M G146R",5
"lib1","SARS-CoV-2","GTGGACTAAGCCTTGG",3,24.05,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","A89R Y121C F167L",3
"lib1","SARS-CoV-2","GTGGACTACACGTAGT",11,260.47,10.41,-0.35,0.03,2.88,1.03,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","GTGGACTCCCACATAA",9,34.98,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","C6F A22G D98C I104V G116R S139W V153I V173G",8
"lib1","SARS-CoV-2","GTGGACTGAAAAAATA",6,67.88,6,-4.76,1.12,1.5,1.21,0.02,">1 nonsynonymous","F99T G166S",2
"lib1","SARS-CoV-2","GTGGACTGCCTTGACC",1,0.99,NA,NA,NA,NA,NA,NA,"stop","F8* L122Y N171*",3
"lib1","SARS-CoV-2","GTGGAGAAAAAACTGA",5,33.79,6.79,-3.97,0.71,1.5,1.1,0.07,">1 nonsynonymous","F12Y S29Q D112E P133I G196C",5
"lib1","SARS-CoV-2","GTGGAGAACGCGTACC",3,0,NA,NA,NA,NA,NA,NA,"stop","I2* G9V I80L S139I N151S",5
"lib1","SARS-CoV-2","GTGGAGAATAAGTCTA",5,43.44,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44C F62V Q84F Y91I Y121M",5
"lib1","SARS-CoV-2","GTGGAGCACATCCAAA",5,25.29,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92P D98P F185M T201G",4
"lib1","SARS-CoV-2","GTGGAGGGCAATTATA",5,52.61,9.46,-1.31,0.13,1.66,1.11,0.01,">1 nonsynonymous","Y50T D59L N130K G146S",4
"lib1","SARS-CoV-2","GTGGAGTCCCATCCAC",4,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106D Q163K E186I",3
"lib1","SARS-CoV-2","GTGGATAATTCAAAAT",5,0.18,NA,NA,NA,NA,NA,NA,"stop","R16V K56* K132D",3
"lib1","SARS-CoV-2","GTGGATAATTCAGAGT",8,0.15,NA,NA,NA,NA,NA,NA,"stop","N13G S41A Y121* I138L",4
"lib1","SARS-CoV-2","GTGGATAGCTAACGAA",1,9.14,10.43,-0.34,0.24,2.52,1.01,0.01,">1 nonsynonymous","N4Q S29V V52Y Q163G",4
"lib1","SARS-CoV-2","GTGGATCAGAAAAAAG",8,42.56,9.1,-1.67,0.15,1.64,1.13,0.01,">1 nonsynonymous","S43P L183A",2
"lib1","SARS-CoV-2","GTGGATCCCATACATA",4,15.92,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","R27K C61L Y93A N107F C150T",5
"lib1","SARS-CoV-2","GTGGATCCGATAGAAG",2,12.07,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V32S Y119V D137I S164F",4
"lib1","SARS-CoV-2","GTGGATGACTCCAGGC",2,12.26,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","D90T K114Q Y121T",3
"lib1","SARS-CoV-2","GTGGATGCTAGATTAA",16,132.78,9.8,-0.96,0.11,1.89,1.09,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","GTGGATGGAAGACACA",6,36.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D112A G155S F167T",3
"lib1","SARS-CoV-2","GTGGATGGACCTAAAA",5,0.18,NA,NA,NA,NA,NA,NA,"stop","G101P L131* Y175N",3
"lib1","SARS-CoV-2","GTGGATGTACTACCCC",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I P96H V103C",3
"lib1","SARS-CoV-2","GTGGATGTGAGATGTA",5,99.07,10.77,0.01,0.04,2.97,1,0,"1 nonsynonymous","V32E",1
"lib1","SARS-CoV-2","GTGGATTACGACAATT",1,12.96,9.46,-1.3,0.29,1.86,1.02,0.03,">1 nonsynonymous","V11S N64C T201S",3
"lib1","SARS-CoV-2","GTGGCAAATTCCAAAA",3,72.2,9.83,-0.94,0.1,2.04,1.02,0,">1 nonsynonymous","S36F A105G",2
"lib1","SARS-CoV-2","GTGGCAACGGGATTAT",1,21.05,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I72Y K128S T148S",3
"lib1","SARS-CoV-2","GTGGCACAGCCACTGC",2,18.23,9.72,-1.04,0.17,2.34,1,0.01,">1 nonsynonymous","F8S Y35V C61N",3
"lib1","SARS-CoV-2","GTGGCAGCGGAATTGG",6,74.68,6.54,-4.23,0.33,1.5,1.17,0.01,">1 nonsynonymous","F99V N120H Y143L",3
"lib1","SARS-CoV-2","GTGGCAGGAATCCAAT",1,22.41,8.81,-1.95,0.22,1.5,1.07,0.02,">1 nonsynonymous","N1W P82I I138L",3
"lib1","SARS-CoV-2","GTGGCAGTATGTCATT",6,2.23,NA,NA,NA,NA,NA,NA,"stop","G9S N92* L122I",3
"lib1","SARS-CoV-2","GTGGCATATTTTAAAA",4,81.25,10.69,-0.08,0.07,2.85,1.04,0,"1 nonsynonymous","S41V",1
"lib1","SARS-CoV-2","GTGGCATCTATGTCAT",1,46.45,10.69,-0.08,0.06,3,1,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","GTGGCATTACATAATG",1,32.54,6,-4.76,0.74,1.5,1.08,0,">1 nonsynonymous","Y119T F126E Q176R",3
"lib1","SARS-CoV-2","GTGGCCAAATATATAG",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G G83E F99Y V115H T148K Q168L",6
"lib1","SARS-CoV-2","GTGGCCAACGACGACA",9,208.05,10.61,-0.16,0.03,2.94,1,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","GTGGCCAATAGAATGT",15,197.01,9.33,-1.44,0.06,2.79,1.1,0,">1 nonsynonymous","L5F L38I G117S",3
"lib1","SARS-CoV-2","GTGGCCAGCCAAGAAG",3,65.9,7.33,-3.43,0.25,1.5,1.1,0.01,">1 nonsynonymous","A33H S53V G152I S164F",4
"lib1","SARS-CoV-2","GTGGCCCACCGAGTAA",3,28.65,9.42,-1.34,0.33,1.5,1,0.05,">1 nonsynonymous","F12E F134N",2
"lib1","SARS-CoV-2","GTGGCCCCAATGCAGT",4,34.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19V I72G Y121L D137G",4
"lib1","SARS-CoV-2","GTGGCCGCAAATTTGT",2,14.5,9.72,-1.04,0.19,1.97,1.1,0.02,">1 nonsynonymous","Y91G P133A",2
"lib1","SARS-CoV-2","GTGGCCGGATACGCTT",9,50.68,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C61R Q79R A145E F167N V182S",5
"lib1","SARS-CoV-2","GTGGCCGTTAAAACTA",6,81.12,9.36,-1.4,0.18,1.65,1.08,0.01,">1 nonsynonymous","K48E V77C D90S",3
"lib1","SARS-CoV-2","GTGGCCTAATTAATGT",3,0.63,NA,NA,NA,NA,NA,NA,"stop","L38* L60M V173M",3
"lib1","SARS-CoV-2","GTGGCCTACTCACTTT",4,28.63,6.01,-4.75,1.09,1.5,1.17,0.02,">1 nonsynonymous","E10N G83K A105P I138Y",4
"lib1","SARS-CoV-2","GTGGCCTCGCATTCCA",3,172.89,10.81,0.05,0.07,2.87,1.03,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","GTGGCCTTGAAAAGAT",2,20.89,8.58,-2.18,0.22,1.7,1.19,0.02,">1 nonsynonymous","I28L K48R G51D L60F Q84N",5
"lib1","SARS-CoV-2","GTGGCCTTTAGTCTTA",4,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146A F167A",2
"lib1","SARS-CoV-2","GTGGCGCCACTGCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61K R73T D90A I138* G152T",5
"lib1","SARS-CoV-2","GTGGCGGATTTAATAT",3,33.77,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D68V E76A L122S",3
"lib1","SARS-CoV-2","GTGGCGTACATCTTCG",5,128.12,10.8,0.03,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGGCTAAATAATTTT",1,19.7,9.76,-1,0.49,1.5,1,0.08,">1 nonsynonymous","N1V G86S Q163V G174R",4
"lib1","SARS-CoV-2","GTGGCTCAAGACCAGG",4,1.05,NA,NA,NA,NA,NA,NA,"stop","S19R S36G G116T T201*",4
"lib1","SARS-CoV-2","GTGGCTCCTGGCATCA",6,124.46,10.23,-0.53,0.05,2.84,1.05,0,">1 nonsynonymous","P54L Y121K",2
"lib1","SARS-CoV-2","GTGGCTCTTTCATAGA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","L5* V11R A105M",3
"lib1","SARS-CoV-2","GTGGCTGACAAAGACT",3,61.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G9Q W23C S36W L60S T100H N130T S139P",7
"lib1","SARS-CoV-2","GTGGCTTAGTAAAGCC",4,49.77,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K48L T63C V181S",3
"lib1","SARS-CoV-2","GTGGCTTTGTCGCTTG",5,0.08,NA,NA,NA,NA,NA,NA,"stop","A89L F99Y K128*",3
"lib1","SARS-CoV-2","GTGGGAACTTGCGATA",4,41.76,6.22,-4.54,0.7,1.5,1.19,0.02,">1 nonsynonymous","G51A V180P",2
"lib1","SARS-CoV-2","GTGGGAATACCTAACA",4,21.88,10.43,-0.34,0.08,2.88,1.03,0,">1 nonsynonymous","N4T F134R",2
"lib1","SARS-CoV-2","GTGGGAATTACTTCGC",4,44.82,6.45,-4.31,0.73,1.5,1.19,0.05,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","GTGGGACCGAACAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","W106N C158* Y165*",3
"lib1","SARS-CoV-2","GTGGGACCGCATCAAC",3,21.48,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A67T N130M Y143D",3
"lib1","SARS-CoV-2","GTGGGACGGACTTTCT",4,30.63,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F17L R124H V153G",3
"lib1","SARS-CoV-2","GTGGGACTCTTTCCCC",1,10.85,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V20S Y35S T46V S113L G152A P169V",6
"lib1","SARS-CoV-2","GTGGGAGACATACTAC",1,4.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","GTGGGAGGAATCAAGC",2,38.71,10.69,-0.08,0.07,2.98,1,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","GTGGGAGTGGGAATTC",3,21.08,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D97T V173R V181P",3
"lib1","SARS-CoV-2","GTGGGATAAGTTCCGA",3,0.63,NA,NA,NA,NA,NA,NA,"stop","Y39H C49V D98V C102G S113H Y119*",6
"lib1","SARS-CoV-2","GTGGGCACGCATACCA",2,43.88,10.1,-0.67,0.06,2.9,1,0,">1 nonsynonymous","F62H G116I",2
"lib1","SARS-CoV-2","GTGGGCCACGAACCGT",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y F99L Y143S",3
"lib1","SARS-CoV-2","GTGGGCCTAACTCTTA",6,7.73,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14C D98R Q144S K199D",4
"lib1","SARS-CoV-2","GTGGGCGAAAGGTTGC",1,20.16,10.43,-0.34,0.06,2.92,1,0,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","GTGGGCGGACTAAAGA",4,34.67,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K26R A81V D97Q A105R",4
"lib1","SARS-CoV-2","GTGGGCGGTGACAAAA",1,1.94,NA,NA,NA,NA,NA,NA,"stop","W23* Y35F",2
"lib1","SARS-CoV-2","GTGGGCTGTAAATGAA",2,8.81,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","C61E K114M N120C E154G P161S G166I",6
"lib1","SARS-CoV-2","GTGGGCTTCATAATCG",2,54.45,10.33,-0.43,0.08,2.89,1.02,0,">1 nonsynonymous","T55F N58L",2
"lib1","SARS-CoV-2","GTGGGCTTCCACGATA",1,8.89,10.7,-0.07,0.09,2.8,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTGGGGAATCATTTAA",2,20.52,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R16F N107L S113L N120V T140M N151K",6
"lib1","SARS-CoV-2","GTGGGGATATATATTA",4,20.22,6.59,-4.17,0.39,1.5,1.16,0.02,">1 nonsynonymous","P7L Y91A W106R L131S G146K",5
"lib1","SARS-CoV-2","GTGGGGCTACTTATAC",4,31.84,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","F8C C49S",2
"lib1","SARS-CoV-2","GTGGGGGAATCACTAT",1,70.6,8.39,-2.38,0.18,2.17,1.09,0.01,">1 nonsynonymous","G155H Q168K",2
"lib1","SARS-CoV-2","GTGGGGGATCAAATAG",6,32.03,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","K48L S113P Y123S",3
"lib1","SARS-CoV-2","GTGGGGGGAACATAAG",1,0.81,NA,NA,NA,NA,NA,NA,"stop","L5S T55S A81H G155S T201*",5
"lib1","SARS-CoV-2","GTGGGGTCTAGAATGA",2,13.82,6.23,-4.54,2,1.5,1.03,0.02,">1 nonsynonymous","T63L G101F P149L",3
"lib1","SARS-CoV-2","GTGGGTCATAGCTTCA",3,36.23,10.02,-0.75,0.17,1.96,1.04,0.01,">1 nonsynonymous","F47L C61G D98S",3
"lib1","SARS-CoV-2","GTGGGTCGCTCCAGTG",3,57.61,9.21,-1.55,0.14,1.8,1.18,0.01,">1 nonsynonymous","F8P V20P",2
"lib1","SARS-CoV-2","GTGGGTCGTCCTCATT",2,63.66,6.48,-4.29,0.41,1.5,1.17,0.02,">1 nonsynonymous","S19N L131C G155K",3
"lib1","SARS-CoV-2","GTGGGTGCGCCAATGG",6,77.47,10.41,-0.35,0.05,2.88,1.03,0,">1 nonsynonymous","F134S G152D H189Q T201S",4
"lib1","SARS-CoV-2","GTGGGTGTACAGTATT",14,303.9,8.75,-2.01,0.08,2.67,1.13,0,">1 nonsynonymous","C31M N120R G166S",3
"lib1","SARS-CoV-2","GTGGGTTAGTCCATAG",2,23.8,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5F S41A A105P Y143S",4
"lib1","SARS-CoV-2","GTGGGTTATGACCCTA",1,8.9,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S113I Y143Q V180P",3
"lib1","SARS-CoV-2","GTGGTAAACATTCGTG",18,326.2,10.32,-0.44,0.04,2.88,1.05,0,">1 nonsynonymous","V77I L122N A145S",3
"lib1","SARS-CoV-2","GTGGTAACTGTCCAAA",2,68.02,10.14,-0.62,0.08,2.78,1.04,0,">1 nonsynonymous","C6Y S129A G196Q",3
"lib1","SARS-CoV-2","GTGGTACAAATGGTTG",14,204.44,10.63,-0.13,0.04,2.92,1.04,0,">1 nonsynonymous","V37R Y123M",2
"lib1","SARS-CoV-2","GTGGTACAGCTCACTA",8,167.37,10.47,-0.29,0.04,2.96,1,0,">1 nonsynonymous","G155E P197V",2
"lib1","SARS-CoV-2","GTGGTACCGGAAAATA",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R Q84F D90N P133G F167D V173N V180S",7
"lib1","SARS-CoV-2","GTGGTACCTGGCGAAG",4,30.98,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","P96R S113F C150K",3
"lib1","SARS-CoV-2","GTGGTACGCACAAAAA",2,7.74,9.08,-1.68,0.28,1.54,1.12,0.04,">1 nonsynonymous","S19R D90N G152S",3
"lib1","SARS-CoV-2","GTGGTAGCAATAAAAA",9,214.58,10.66,-0.1,0.04,2.87,1.05,0,">1 nonsynonymous","S29C F62P P197R",3
"lib1","SARS-CoV-2","GTGGTAGTCCCAGATT",3,98.48,8.39,-2.37,0.12,2.63,1.1,0.01,">1 nonsynonymous","G83S S113N",2
"lib1","SARS-CoV-2","GTGGTATACCTAGAAT",5,66.52,10.59,-0.18,0.06,2.86,1.11,0,"1 nonsynonymous","K56C",1
"lib1","SARS-CoV-2","GTGGTATGAAACCAAA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","GTGGTATGAAGAGTAC",2,27.66,10.7,-0.07,0.19,2.6,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTGGTATTCCGCAAAG",2,0.54,NA,NA,NA,NA,NA,NA,"stop","N13* Y39M K94P F99*",4
"lib1","SARS-CoV-2","GTGGTCAATATAGAAC",1,30.42,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89I F99S Y121L",3
"lib1","SARS-CoV-2","GTGGTCACAGATTAAG",7,84.98,10.02,-0.74,0.07,2.18,1.04,0,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","GTGGTCACGTTTATTC",1,1.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119I",1
"lib1","SARS-CoV-2","GTGGTCCTCAACACAT",7,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H S129F V153N Y165L F185M",5
"lib1","SARS-CoV-2","GTGGTCGTACCTATTG",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I V20L C31H S139P",4
"lib1","SARS-CoV-2","GTGGTCTATACCGTTA",1,12.54,10.88,0.12,0.09,2.91,1.01,0,"1 nonsynonymous","N110P",1
"lib1","SARS-CoV-2","GTGGTCTTAAATAAAA",1,3.21,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","GTGGTCTTTGATGATA",7,2.27,NA,NA,NA,NA,NA,NA,"stop","T3I F17T C61* S147L V173T",5
"lib1","SARS-CoV-2","GTGGTGAAAATCTCTA",4,146.56,10.6,-0.16,0.04,2.98,1.01,0,">1 nonsynonymous","G83N K198E",2
"lib1","SARS-CoV-2","GTGGTGATTAGACGAA",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D Y165T",2
"lib1","SARS-CoV-2","GTGGTGCTACGCGACA",2,63.69,10.11,-0.65,0.06,2.88,1.01,0,">1 nonsynonymous","K87G I138Q",2
"lib1","SARS-CoV-2","GTGGTGCTGAAATCCA",6,66.64,9.96,-0.8,0.12,1.98,1.1,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","GTGGTGGCAGCATCGT",3,67.35,10.73,-0.04,0.06,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGGTGGGGATAAAAG",3,17.31,7.85,-2.91,0.2,1.5,1.12,0.01,">1 nonsynonymous","L60Y G86N G116L",3
"lib1","SARS-CoV-2","GTGGTGTTACAAATTA",4,39.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19H S41T T55E V103F",4
"lib1","SARS-CoV-2","GTGGTGTTATAAGAAT",4,56.11,9.82,-0.94,0.14,1.89,1.03,0.01,">1 nonsynonymous","D97R A105F",2
"lib1","SARS-CoV-2","GTGGTTAAAAAAACCC",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101I N107P G116H",3
"lib1","SARS-CoV-2","GTGGTTAAATTTCAAC",7,60.58,9.37,-1.4,0.18,1.77,1.11,0.01,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","GTGGTTACAGCACTGA",1,46.47,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L38V L95G N107P",3
"lib1","SARS-CoV-2","GTGGTTAGAAGAAGTT",4,112.29,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","G172V",1
"lib1","SARS-CoV-2","GTGGTTATCGCTCCCA",11,90.26,9.14,-1.63,0.12,2.01,1.08,0.01,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","GTGGTTCCATCGGCCC",7,1.04,NA,NA,NA,NA,NA,NA,"stop","S43V T63R D68P Q84H F156* G174R",6
"lib1","SARS-CoV-2","GTGGTTGAGGGCATGT",6,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157S",1
"lib1","SARS-CoV-2","GTGGTTGTCCGCCCAT",4,66.36,9.47,-1.3,0.14,1.82,1.09,0.01,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","GTGGTTTACAAAATCA",3,10.43,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","P82M N92S T100Q",3
"lib1","SARS-CoV-2","GTGGTTTTTATACTAC",2,46.26,8.59,-2.17,0.09,2.34,1.16,0,">1 nonsynonymous","N107C A145Q",2
"lib1","SARS-CoV-2","GTGTAAAAAAAGACTC",4,94.76,10.7,-0.07,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTAAAAAAGCCAAT",1,51.08,10.79,0.03,0.08,2.93,1.03,0,">1 nonsynonymous","T3L L122K",2
"lib1","SARS-CoV-2","GTGTAAAAAGAAACAA",2,33.32,6.41,-4.36,0.32,1.5,1.09,0.01,">1 nonsynonymous","R25G Y119H Y123I",3
"lib1","SARS-CoV-2","GTGTAAAAATCATTTG",5,83.87,8.71,-2.06,0.11,2.56,1.13,0,">1 nonsynonymous","E141M G152N N157S P191S",4
"lib1","SARS-CoV-2","GTGTAAAAGAAAAACC",6,73.07,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y39N F44M G101H G146L",4
"lib1","SARS-CoV-2","GTGTAAAAGGCCTACT",4,90.35,8.49,-2.28,0.09,2.56,1.06,0,">1 nonsynonymous","D90R T100Q Y119L K198Y",4
"lib1","SARS-CoV-2","GTGTAAAGTCTCAAGC",3,98.35,10.84,0.08,0.05,2.93,1.03,0,">1 nonsynonymous","T55A N64A",2
"lib1","SARS-CoV-2","GTGTAAATTACCCTGA",4,23.13,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","L95P F134T",2
"lib1","SARS-CoV-2","GTGTAACAACATTGAC",2,7.12,7.75,-3.02,0.43,1.5,1.22,0.05,">1 nonsynonymous","N92A K128Q",2
"lib1","SARS-CoV-2","GTGTAACCTCTATTAC",1,19.6,6.33,-4.44,0.64,1.5,1.07,0.02,">1 nonsynonymous","D59I D90Y N107L E154K",4
"lib1","SARS-CoV-2","GTGTAACTCGGTGAGT",6,2.4,NA,NA,NA,NA,NA,NA,"stop","G83V D98Y S113* R179W",4
"lib1","SARS-CoV-2","GTGTAACTTGTTAAAA",1,8.4,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","D34R T46S D112L Y119R Q163N T201E",6
"lib1","SARS-CoV-2","GTGTAACTTTGAATAA",4,1.14,NA,NA,NA,NA,NA,NA,"stop","N64V Y91* R179W P191R",4
"lib1","SARS-CoV-2","GTGTAAGACCAAATAT",7,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A D97C Y121V A190K T201V",5
"lib1","SARS-CoV-2","GTGTAAGAGCGAGATC",4,139.61,10.76,-0.01,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTAAGCACGCTATG",4,34.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12D D68E D98Y R136G",4
"lib1","SARS-CoV-2","GTGTAAGCAGGCTCAC",2,13.59,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","S43W C49I T55S A67N Y91N L131F",6
"lib1","SARS-CoV-2","GTGTAAGGTCCCATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D90Q E141* Y175*",3
"lib1","SARS-CoV-2","GTGTAAGTAGAAAGTG",15,100.76,9.63,-1.14,0.16,1.8,1.08,0.01,"1 nonsynonymous","L162N",1
"lib1","SARS-CoV-2","GTGTAAGTCCAATTTA",3,32.99,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9I N92M S184K",3
"lib1","SARS-CoV-2","GTGTAAGTGTGAATTG",2,19.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y91F D137L",2
"lib1","SARS-CoV-2","GTGTAATAAATAACCT",5,53.08,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","Y93V K198N",2
"lib1","SARS-CoV-2","GTGTAATATATTAGGT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Y39* S139P E154N",3
"lib1","SARS-CoV-2","GTGTAATCACATCCCT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","G9P C61* E76D",3
"lib1","SARS-CoV-2","GTGTAATCCACTTAAG",4,1.89,NA,NA,NA,NA,NA,NA,"stop","S41* V103Q S129R",3
"lib1","SARS-CoV-2","GTGTAATCTCTAGCAC",9,80.65,9.57,-1.2,0.11,1.85,1.07,0,">1 nonsynonymous","G86A F160Y",2
"lib1","SARS-CoV-2","GTGTAATGAATTTTGA",2,0.78,NA,NA,NA,NA,NA,NA,"stop","A22P L57S N107* L162E",4
"lib1","SARS-CoV-2","GTGTAATGAGCCGGCA",4,71.81,6,-4.76,2,2.14,1.14,0,">1 nonsynonymous","G86T K94R R124S L162Y",4
"lib1","SARS-CoV-2","GTGTACAAACATACAC",1,38.72,10.32,-0.44,0.06,2.8,1,0,"1 nonsynonymous","I72T",1
"lib1","SARS-CoV-2","GTGTACAAACCATTCT",6,117.18,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","R179E",1
"lib1","SARS-CoV-2","GTGTACAAGTCTCTAC",4,52.85,10.77,0.01,0.05,2.93,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTACACAGGCCCGT",1,9.66,10.27,-0.5,0.2,2.78,1.15,0.02,"1 nonsynonymous","S184D",1
"lib1","SARS-CoV-2","GTGTACACATCTCCTT",8,21.63,6.26,-4.5,0.44,1.5,1.13,0.01,">1 nonsynonymous","F12L G51D G155V",3
"lib1","SARS-CoV-2","GTGTACACCTGGAAAT",6,91.24,10.7,-0.06,0.05,2.93,1,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","GTGTACAGAACAAAGG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","T3* A42L F62H",3
"lib1","SARS-CoV-2","GTGTACAGTCTTACTT",1,25.37,10.34,-0.42,0.08,2.89,1.02,0,">1 nonsynonymous","N1L F44I",2
"lib1","SARS-CoV-2","GTGTACATCCAGTAAA",1,26.45,9.98,-0.78,0.21,1.95,1.11,0.02,">1 nonsynonymous","C6R A105S",2
"lib1","SARS-CoV-2","GTGTACCAATGATACA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","V71* G166S",2
"lib1","SARS-CoV-2","GTGTACCACACATTTG",6,157.55,10.69,-0.07,0.04,2.95,1,0,">1 nonsynonymous","L5V F160L",2
"lib1","SARS-CoV-2","GTGTACCACTCTGCCT",5,39.2,10.86,0.09,0.07,2.94,1.02,0,"1 nonsynonymous","P54Q",1
"lib1","SARS-CoV-2","GTGTACCAGGGCAAAT",2,80.82,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N24A F134T E154V Y175V",4
"lib1","SARS-CoV-2","GTGTACCGAGACCAAT",3,26.19,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","E10Y R73E F167D T201I",4
"lib1","SARS-CoV-2","GTGTACCTATCAGGCA",4,20.04,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A89D N107R N157S",3
"lib1","SARS-CoV-2","GTGTACCTGGTGACTT",1,50.12,10.76,-0.01,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTACGACGCAATTT",3,80.83,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R78F G101F Y143W G155S",4
"lib1","SARS-CoV-2","GTGTACGCCACTACCA",4,1.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96D",1
"lib1","SARS-CoV-2","GTGTACGCTTTCCACC",8,2.71,NA,NA,NA,NA,NA,NA,"stop","V11I A33K C49* N58F",4
"lib1","SARS-CoV-2","GTGTACGGCGATGACC",9,174.58,10.72,-0.05,0.05,2.93,1.04,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","GTGTACTAACGATAAA",4,13.99,10.67,-0.09,0.08,2.83,1,0,">1 nonsynonymous","K56T G86A G117F Y143S",4
"lib1","SARS-CoV-2","GTGTACTAATGTCGAT",3,22.87,8.78,-1.98,0.17,2.67,1.08,0.01,">1 nonsynonymous","P7R G146A E154Y",3
"lib1","SARS-CoV-2","GTGTACTTAATAAGTC",1,0.44,NA,NA,NA,NA,NA,NA,"stop","A81E D97M Y175*",3
"lib1","SARS-CoV-2","GTGTACTTCATGAAAC",5,33.88,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31F L38Q I104Y Y119L S164N Y175I",6
"lib1","SARS-CoV-2","GTGTACTTGACTAAAC",5,31.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S Y50R",2
"lib1","SARS-CoV-2","GTGTACTTTGAAAAAT",3,90.65,8.58,-2.18,0.2,1.63,1.16,0.01,">1 nonsynonymous","S19K V37L P169L",3
"lib1","SARS-CoV-2","GTGTATAAAATTATAT",6,420.37,10.22,-0.55,0.03,2.87,1.01,0,">1 nonsynonymous","N58Y P149H",2
"lib1","SARS-CoV-2","GTGTATAAGTAGAAAA",1,61.63,10.1,-0.66,0.05,2.9,1,0,">1 nonsynonymous","D75S Q84G V115P V153P",4
"lib1","SARS-CoV-2","GTGTATAATATATGTT",2,31.78,8.75,-2.02,0.19,2.06,1.16,0.02,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","GTGTATACACCGTAGT",4,70.52,8.25,-2.51,0.2,1.5,1.13,0.02,">1 nonsynonymous","N64D N157V",2
"lib1","SARS-CoV-2","GTGTATATACCCAAAC",9,78.03,10.7,-0.07,0.05,2.83,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTATATCATAATCA",4,49.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V52H K56C A105H N118L Y175I",5
"lib1","SARS-CoV-2","GTGTATATGCTTAGAA",3,84.65,8.21,-2.55,0.11,2.23,1.13,0,">1 nonsynonymous","N64I N157F",2
"lib1","SARS-CoV-2","GTGTATATGGTTAGAG",4,58.41,10.78,0.02,0.07,2.97,1.02,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","GTGTATCACACTAATT",6,12.27,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y93T T201M",2
"lib1","SARS-CoV-2","GTGTATCCATATTATG",1,32.77,10.79,0.03,0.05,2.96,1,0,">1 nonsynonymous","K114V V173I T201S",3
"lib1","SARS-CoV-2","GTGTATCCTGCAATAC",2,50.22,10.78,0.02,0.05,2.88,1.07,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","GTGTATCTAGATGCTA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152D Y165D",2
"lib1","SARS-CoV-2","GTGTATCTTTTACGAA",7,90.84,10.78,0.01,0.08,2.89,1.06,0,"1 nonsynonymous","K48R",1
"lib1","SARS-CoV-2","GTGTATGCCGAAGTTG",4,34.25,10.62,-0.14,0.05,2.81,1.12,0,"1 nonsynonymous","V37C",1
"lib1","SARS-CoV-2","GTGTATGCCGCGTGGA",5,35.45,6,-4.76,2,3,1.26,0,">1 nonsynonymous","V11A V32G W106G G146H",4
"lib1","SARS-CoV-2","GTGTATGCCTGGGATG",9,133.69,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33E V52N A105Y N110V",4
"lib1","SARS-CoV-2","GTGTATTCTATCATGT",6,81.48,10.78,0.01,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTATTTTAGCAGCG",4,32.55,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","S108D P133L N157I T201P",4
"lib1","SARS-CoV-2","GTGTCAAAAACTGTAA",10,247.87,10.65,-0.11,0.06,2.91,1.03,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","GTGTCAAATAAACATT",7,11.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S N13M A81L P96T",4
"lib1","SARS-CoV-2","GTGTCAACGTGGCGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I28W S45* K94P",3
"lib1","SARS-CoV-2","GTGTCAACTAATGCAT",3,33.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M Q84L D90F N157L",4
"lib1","SARS-CoV-2","GTGTCAAGAAAAGGAG",4,15.54,10.74,-0.02,0.07,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTCAAGAAGAAACA",3,81.24,9.84,-0.92,0.09,2.59,1.03,0,">1 nonsynonymous","A33E G116K",2
"lib1","SARS-CoV-2","GTGTCAATATACGTCC",2,86.02,10.34,-0.42,0.05,2.97,1.02,0,">1 nonsynonymous","Y39H T140V G196V",3
"lib1","SARS-CoV-2","GTGTCAATCTCGTCAT",11,189.37,10.37,-0.39,0.03,2.93,1.02,0,">1 nonsynonymous","N58S A67I",2
"lib1","SARS-CoV-2","GTGTCACAACGTACGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F99M D112L F156Y",4
"lib1","SARS-CoV-2","GTGTCACACAAACACC",1,23.31,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S45C Y93N S129I",3
"lib1","SARS-CoV-2","GTGTCACCTCCAGAAA",1,25.78,8.15,-2.62,0.25,1.5,1.05,0.02,">1 nonsynonymous","V37I V77L Y91E",3
"lib1","SARS-CoV-2","GTGTCACGAATAACTA",7,18.7,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3M N92S V181L",3
"lib1","SARS-CoV-2","GTGTCACGATGAACAA",4,64.75,9.78,-0.98,0.11,2.33,1.05,0.01,">1 nonsynonymous","R16H G51D D97P G174S",4
"lib1","SARS-CoV-2","GTGTCACGGGCACACG",8,116.32,9.92,-0.84,0.05,2.82,1.01,0,">1 nonsynonymous","V115G Q144T",2
"lib1","SARS-CoV-2","GTGTCAGAAATAAAGC",5,82.08,10.18,-0.58,0.04,2.84,1.04,0,">1 nonsynonymous","E10N S147L V173Y",3
"lib1","SARS-CoV-2","GTGTCAGAATAAGAAA",2,37.9,10.64,-0.12,0.1,2.87,1.03,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","GTGTCAGGCGAAACCA",9,55.84,9.87,-0.89,0.15,1.65,1.08,0.01,">1 nonsynonymous","W106Y K128F T140D",3
"lib1","SARS-CoV-2","GTGTCAGTGTACATCC",3,50.34,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61P R124A",2
"lib1","SARS-CoV-2","GTGTCATACAATCGCA",12,176.56,10.65,-0.11,0.09,2.91,1.07,0,">1 nonsynonymous","I2P N120D",2
"lib1","SARS-CoV-2","GTGTCATATTGATTTA",2,31.81,10.38,-0.38,0.07,2.94,1.02,0,">1 nonsynonymous","Y39R G83A Q168R",3
"lib1","SARS-CoV-2","GTGTCATCTTATAGTA",1,1.9,NA,NA,NA,NA,NA,NA,"stop","D59G A105N Y119* P149S V182S",5
"lib1","SARS-CoV-2","GTGTCATGCAAAGAAA",4,133.39,10.24,-0.52,0.05,2.85,1.01,0,">1 nonsynonymous","T85F I104V K132L",3
"lib1","SARS-CoV-2","GTGTCATGCGTACGGA",1,23.66,10.61,-0.15,0.05,2.94,1.01,0,">1 nonsynonymous","T3S V37R K114L",3
"lib1","SARS-CoV-2","GTGTCCACGTGTGCTA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T P96Y S108H",3
"lib1","SARS-CoV-2","GTGTCCATGAATATTA",1,20.57,10.26,-0.5,0.06,2.95,1.01,0,">1 nonsynonymous","T140E F185I",2
"lib1","SARS-CoV-2","GTGTCCCCAGCGAAAT",6,36.79,6.05,-4.71,0.83,1.5,1.2,0.01,">1 nonsynonymous","F44R N107F",2
"lib1","SARS-CoV-2","GTGTCCCCCTTATCAT",1,6.27,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103I Y119S E135L",3
"lib1","SARS-CoV-2","GTGTCCCGTATCGGGC",2,19.91,10.63,-0.14,0.14,2.85,1,0.01,"1 nonsynonymous","P149M",1
"lib1","SARS-CoV-2","GTGTCCGGAGAGTCAC",1,27.04,6.32,-4.44,1.15,1.5,1.18,0.07,">1 nonsynonymous","F99E L131W",2
"lib1","SARS-CoV-2","GTGTCCGTAAAGACCA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","S45* N92L F99L G155T",4
"lib1","SARS-CoV-2","GTGTCCTTATGATAAA",3,77.77,10.14,-0.63,0.07,2.49,1.04,0,">1 nonsynonymous","T3N V37C F44S",3
"lib1","SARS-CoV-2","GTGTCGAATGTTGAAA",9,103,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S F44L K56T I88M",4
"lib1","SARS-CoV-2","GTGTCGACAGATAAAT",3,27.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T46W I80M P96S R136T",4
"lib1","SARS-CoV-2","GTGTCGGACTACCACA",1,43.63,8.97,-1.8,0.15,1.63,1.17,0.01,">1 nonsynonymous","D75I S139L",2
"lib1","SARS-CoV-2","GTGTCGGTACGGGGCA",8,2.1,NA,NA,NA,NA,NA,NA,"stop","E141* R179C",2
"lib1","SARS-CoV-2","GTGTCGGTGGTGACAC",3,10.93,10.57,-0.2,0.13,2.84,1,0.01,">1 nonsynonymous","Y121V Q168W",2
"lib1","SARS-CoV-2","GTGTCGTTGACTTTTG",2,10.64,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13I G86F R136A",3
"lib1","SARS-CoV-2","GTGTCTAAAAGGCTAC",2,5.16,8.65,-2.12,0.17,2.08,1.05,0.01,">1 nonsynonymous","Q176R L183I",2
"lib1","SARS-CoV-2","GTGTCTAAGACGAGTT",1,20.76,10.69,-0.08,0.08,2.78,1.11,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","GTGTCTAATGGACTAC",1,52.08,10.78,0.02,0.04,2.92,1.01,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","GTGTCTACAGGTCAGG",1,19.88,6.42,-4.35,0.45,1.5,1.09,0.02,">1 nonsynonymous","N24A Y35S S36Y N40L V71G",5
"lib1","SARS-CoV-2","GTGTCTACCTTCAAAC",3,45.44,10.67,-0.09,0.06,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGTCTCGAAGTTTCC",1,38.52,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A89L E154S Y175M",3
"lib1","SARS-CoV-2","GTGTCTGAGCTGCCGC",3,28.68,10.31,-0.46,0.06,2.81,1.01,0,">1 nonsynonymous","L60F S129L",2
"lib1","SARS-CoV-2","GTGTCTTACCACTCCT",1,7.75,6,-4.76,2,3,1.12,0,">1 nonsynonymous","P96E A105R",2
"lib1","SARS-CoV-2","GTGTCTTGACAACCAG",6,22.74,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","A33N K114W P161L P177C",4
"lib1","SARS-CoV-2","GTGTCTTTGGATCCCG",5,24.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V20R S41H N58C V71Q T100R",5
"lib1","SARS-CoV-2","GTGTGAAAACTTTCAA",2,20.48,6,-4.76,1.72,3,1.08,0.01,">1 nonsynonymous","C6S G86N F160S",3
"lib1","SARS-CoV-2","GTGTGAAAGATTGATA",2,13.74,7.33,-3.43,0.26,1.5,1.02,0.03,">1 nonsynonymous","E10I K56T G86M",3
"lib1","SARS-CoV-2","GTGTGAAAGTTAGAGT",1,48.31,10.17,-0.59,0.07,3,1,0,">1 nonsynonymous","D59E Y119R",2
"lib1","SARS-CoV-2","GTGTGAAATGATAACT",3,55.2,10.18,-0.58,0.08,2.82,1.06,0,">1 nonsynonymous","A33M D59S A81T K199Y",4
"lib1","SARS-CoV-2","GTGTGAACAGCAAAAG",1,19.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G116A P161I",2
"lib1","SARS-CoV-2","GTGTGAAGAAAAAGGT",10,105.84,9.93,-0.83,0.07,2.66,1.05,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","GTGTGAAGCACACATA",8,3.85,NA,NA,NA,NA,NA,NA,"stop","F99I L162*",2
"lib1","SARS-CoV-2","GTGTGAATACTTGTAT",2,26.28,9.63,-1.13,0.16,2.11,1.06,0.01,">1 nonsynonymous","S45V D90L",2
"lib1","SARS-CoV-2","GTGTGAATCCTCCAAT",2,8.97,10.65,-0.11,0.17,2.76,1,0.01,">1 nonsynonymous","N4L S43N",2
"lib1","SARS-CoV-2","GTGTGAATGACGTCCT",2,86.73,6.74,-4.02,0.41,1.5,1.25,0.03,">1 nonsynonymous","Y39E L95T F160L",3
"lib1","SARS-CoV-2","GTGTGACTATGGACGC",1,42.5,9.8,-0.96,0.06,2.93,1.03,0,">1 nonsynonymous","Y119R F134A",2
"lib1","SARS-CoV-2","GTGTGAGAGCGCAATG",3,87.26,10.72,-0.04,0.06,2.94,1.02,0,"1 nonsynonymous","Y66F",1
"lib1","SARS-CoV-2","GTGTGAGCTCAAACAA",2,28.1,8.38,-2.38,0.2,2.54,1.08,0.02,">1 nonsynonymous","G146V F156T",2
"lib1","SARS-CoV-2","GTGTGAGGTTTGGCAG",2,62.06,9.61,-1.15,0.15,1.85,1.13,0.01,">1 nonsynonymous","F12H Y35L F62T",3
"lib1","SARS-CoV-2","GTGTGATAAAGCCTAA",4,1.45,NA,NA,NA,NA,NA,NA,"stop","C6S P133* S184Y",3
"lib1","SARS-CoV-2","GTGTGATGGAAAAGGA",4,15.47,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","R124T T148P E154S",3
"lib1","SARS-CoV-2","GTGTGCAAAAACGCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5S Y159A Q163* V180W",4
"lib1","SARS-CoV-2","GTGTGCAAGTTAACCC",5,37.45,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","P7S G51A G83S V182N",4
"lib1","SARS-CoV-2","GTGTGCAATAAATAGA",2,35.64,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","V77E D97G K198T",3
"lib1","SARS-CoV-2","GTGTGCAATCGGGTCC",2,16.1,10.76,-0.01,0.12,2.83,1.12,0.01,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","GTGTGCACCGACCACG",2,21.8,10.34,-0.42,0.06,2.85,1.03,0,">1 nonsynonymous","A14I S147G",2
"lib1","SARS-CoV-2","GTGTGCACGGTCACGG",5,67.05,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","P7F S43P Y66L P133F S184V",5
"lib1","SARS-CoV-2","GTGTGCATTGATAATG",5,91.89,8.19,-2.57,0.25,1.5,1.1,0.02,">1 nonsynonymous","K48A N120F F134I S200P",4
"lib1","SARS-CoV-2","GTGTGCCATGAATATT",1,45.31,10.14,-0.62,0.07,2.9,1,0,">1 nonsynonymous","G83D L125G",2
"lib1","SARS-CoV-2","GTGTGCCCGAAAAGAG",1,4.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81Q",1
"lib1","SARS-CoV-2","GTGTGCCCGGTCCGAC",7,36.07,9.83,-0.94,0.18,1.5,1.03,0.02,">1 nonsynonymous","C49T P54R T148P P197K",4
"lib1","SARS-CoV-2","GTGTGCCGCAGGAGAT",2,1.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTGTGCCTTTTACGGG",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A14G V77W",3
"lib1","SARS-CoV-2","GTGTGCGCAAATAATT",8,147.41,9.75,-1.01,0.07,2.68,1.04,0,">1 nonsynonymous","G83N P161G",2
"lib1","SARS-CoV-2","GTGTGCGCGAGTAAAG",3,31.33,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6Q I28F T55G L95E G155V",5
"lib1","SARS-CoV-2","GTGTGCGGCAGGGGTG",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16G C102S P133Y",3
"lib1","SARS-CoV-2","GTGTGCGTATTTACAA",5,47.13,6,-4.76,2,3,1.41,0.01,">1 nonsynonymous","F70S S129T G155R",3
"lib1","SARS-CoV-2","GTGTGCTATCTAACAG",6,29.96,6.11,-4.66,1.13,1.5,1.25,0.04,">1 nonsynonymous","L5N F62G D97S W106Q C158F",5
"lib1","SARS-CoV-2","GTGTGCTATGAGCGTT",8,74.57,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","P96L R136L",2
"lib1","SARS-CoV-2","GTGTGCTCTAGCTAAT",2,68.04,10.31,-0.46,0.05,2.84,1,0,"1 nonsynonymous","Y66K",1
"lib1","SARS-CoV-2","GTGTGCTGTTGACTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","K56S T148*",2
"lib1","SARS-CoV-2","GTGTGCTTATGACACG",1,66.13,9.35,-1.41,0.1,2.22,1.14,0,">1 nonsynonymous","N64I K128N G155F",3
"lib1","SARS-CoV-2","GTGTGGACATTCGGAG",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65Q A105R",2
"lib1","SARS-CoV-2","GTGTGGATACCGTAAA",3,66.04,10.74,-0.03,0.03,2.96,1.03,0,">1 nonsynonymous","N4P N171A",2
"lib1","SARS-CoV-2","GTGTGGCATTTACTAA",2,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122T T140S G155D",3
"lib1","SARS-CoV-2","GTGTGGCCGTTCAAAT",3,6.23,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","F12W V52N Y93P Q144M C158P",5
"lib1","SARS-CoV-2","GTGTGGGTCATTTACA",1,6.51,10.92,0.16,0.1,2.94,1.02,0,">1 nonsynonymous","P149I N171H",2
"lib1","SARS-CoV-2","GTGTGGTCCGTCCAGT",1,31.5,10.74,-0.02,0.08,2.92,1.04,0,">1 nonsynonymous","I28M Y35S C61Y",3
"lib1","SARS-CoV-2","GTGTGTCCCCATCAAA",3,73.01,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A81P G86E",2
"lib1","SARS-CoV-2","GTGTGTCGCTCCCGAA",3,31.44,8.1,-2.66,0.15,2.03,1.05,0.01,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","GTGTGTGAACAAGCCT",5,33.37,6.29,-4.47,0.38,1.55,1.08,0.01,">1 nonsynonymous","A89E G146S C195G",3
"lib1","SARS-CoV-2","GTGTGTGCGAAGCCAT",5,40.87,10.68,-0.08,0.06,2.85,1.08,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","GTGTGTGTCGTTTGGG",10,94.53,10.79,0.02,0.05,2.9,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGTGTTATAACGCTT",8,7.44,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P7C A33I I80Y S139K",4
"lib1","SARS-CoV-2","GTGTGTTTAAATGTAC",4,50.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137P Q163I",2
"lib1","SARS-CoV-2","GTGTTAAAGCGAACCA",1,3.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","GTGTTAAGCCGTATCC",6,159.72,10.68,-0.09,0.05,2.9,1.04,0,">1 nonsynonymous","E10A N64Y",2
"lib1","SARS-CoV-2","GTGTTAATACATATCC",12,7.7,NA,NA,NA,NA,NA,NA,"stop","N4* V37S D137F",3
"lib1","SARS-CoV-2","GTGTTAATAGCCCGTA",2,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G F62K F126W",3
"lib1","SARS-CoV-2","GTGTTACAAAAGAGGA",3,28.97,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","S45R I88Y",2
"lib1","SARS-CoV-2","GTGTTACAGTACAATG",7,0.95,NA,NA,NA,NA,NA,NA,"stop","D59* A89I P197L",3
"lib1","SARS-CoV-2","GTGTTACCAGAAAATT",2,1.7,NA,NA,NA,NA,NA,NA,"stop","Y50L Y119* Y165K",3
"lib1","SARS-CoV-2","GTGTTACCATTCCCCT",1,22.64,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K94E R136K F185V",3
"lib1","SARS-CoV-2","GTGTTAGATATTTAGA",7,62.29,10.56,-0.21,0.03,2.95,1.03,0,"1 nonsynonymous","G174A",1
"lib1","SARS-CoV-2","GTGTTAGATTATACAA",1,7.54,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10I S41H K56L F160R R179C",5
"lib1","SARS-CoV-2","GTGTTAGGGAACAAAA",3,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64W D90S V103D R179D",4
"lib1","SARS-CoV-2","GTGTTAGTGAACCGAG",1,29.82,10.34,-0.43,0.1,2.86,1.07,0.01,">1 nonsynonymous","S29K N64S K87M",3
"lib1","SARS-CoV-2","GTGTTATATAAATTCA",7,198.63,10.64,-0.12,0.04,2.95,1.02,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","GTGTTATATAACGTTG",4,137.39,10.3,-0.46,0.05,2.97,1.01,0,">1 nonsynonymous","K48E F156H",2
"lib1","SARS-CoV-2","GTGTTATATGATGGTC",1,2.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77Y",1
"lib1","SARS-CoV-2","GTGTTATCTACGAAAG",4,62.21,9.71,-1.05,0.1,2.11,1.09,0,">1 nonsynonymous","F8G N64I",2
"lib1","SARS-CoV-2","GTGTTATGTTACATAA",2,26.73,10.89,0.12,0.07,2.97,1,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","GTGTTATTTCCTGAAG",1,2.48,NA,NA,NA,NA,NA,NA,"stop","A33K S129F A145* E154L N171K",5
"lib1","SARS-CoV-2","GTGTTCAAAAGACCAC",4,63.61,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","P7C G86T C158G",3
"lib1","SARS-CoV-2","GTGTTCAACTGATAGA",8,128.69,10.32,-0.45,0.04,2.93,1.02,0,"1 nonsynonymous","E154P",1
"lib1","SARS-CoV-2","GTGTTCAAGTGAGGAT",2,10.69,6,-4.76,2,3,1.11,0,">1 nonsynonymous","L57A D90P K114W",3
"lib1","SARS-CoV-2","GTGTTCAATGTACCAC",1,18.73,6.65,-4.11,0.53,1.6,1.11,0.03,">1 nonsynonymous","V11G F44S G83T D137E",4
"lib1","SARS-CoV-2","GTGTTCACTCAACAGC",1,29.45,9.26,-1.51,0.08,2.87,1.08,0,">1 nonsynonymous","K87Y Y119V",2
"lib1","SARS-CoV-2","GTGTTCAGAATATATT",2,64.13,10.83,0.06,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTGTTCAGCTAACGTA",2,36.99,10,-0.76,0.16,2.22,1.21,0.02,">1 nonsynonymous","V37M G51F",2
"lib1","SARS-CoV-2","GTGTTCATCAATTTAA",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S L122T",2
"lib1","SARS-CoV-2","GTGTTCATGTACAACC",1,5.53,6.77,-4,0.81,2.24,1.15,0.05,">1 nonsynonymous","A42L I88L T140G P149H G174I",5
"lib1","SARS-CoV-2","GTGTTCATTCACCCGA",1,12.88,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F8C S36E V103P K114L C150P H189L",6
"lib1","SARS-CoV-2","GTGTTCCCAACAGACC",4,95.23,10.59,-0.18,0.06,2.95,1,0,"1 nonsynonymous","A33S",1
"lib1","SARS-CoV-2","GTGTTCCCTGAGATGA",4,58.66,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7V K48S L95P G172D",4
"lib1","SARS-CoV-2","GTGTTCCGCTAAGTGC",4,58.45,9.33,-1.44,0.04,2.84,1.1,0,">1 nonsynonymous","I28Y D97Y G174V",3
"lib1","SARS-CoV-2","GTGTTCGAATAAGGAA",4,170.9,10.65,-0.12,0.04,2.95,1.01,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","GTGTTCGAGGAGCCAC",1,13.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I104V N171K",2
"lib1","SARS-CoV-2","GTGTTCGATAAAAGTT",4,0.52,NA,NA,NA,NA,NA,NA,"stop","N40S C49G P96S I104* N110M G117C",6
"lib1","SARS-CoV-2","GTGTTCGCCAACCTAG",9,86.97,10.73,-0.03,0.03,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGTTCTACGTGTAAT",3,54.55,8.1,-2.66,0.24,1.67,1.1,0.02,"1 nonsynonymous","C150V",1
"lib1","SARS-CoV-2","GTGTTCTCCAGTTCCC",2,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G A18E G86C P161S",4
"lib1","SARS-CoV-2","GTGTTCTCGAGTATCA",5,0.55,NA,NA,NA,NA,NA,NA,"stop","T3C A14P F44* L95E V103S",5
"lib1","SARS-CoV-2","GTGTTCTGGCATGAAT",7,45.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91L A105N G117L",3
"lib1","SARS-CoV-2","GTGTTGACTCTTATAC",9,0.88,NA,NA,NA,NA,NA,NA,"stop","I88* V153G",2
"lib1","SARS-CoV-2","GTGTTGAGCACCTAGC",1,5.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6M P82T L122Q",3
"lib1","SARS-CoV-2","GTGTTGAGGTTGTAGC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F8P V37F P96* S139N P197L",5
"lib1","SARS-CoV-2","GTGTTGATTACCCCAA",1,27.47,10.34,-0.42,0.07,2.98,1,0,">1 nonsynonymous","L60V Y123V",2
"lib1","SARS-CoV-2","GTGTTGCATTCTTACT",5,130.6,10.6,-0.16,0.03,2.94,1.02,0,">1 nonsynonymous","I2Y L57I",2
"lib1","SARS-CoV-2","GTGTTGTCCCGAACCT",1,52.03,6,-4.76,2,1.5,1.25,0.04,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","GTGTTGTCCTTCTGCG",1,32.24,7.38,-3.39,0.23,1.5,1.06,0.01,">1 nonsynonymous","N4I G74M E141H",3
"lib1","SARS-CoV-2","GTGTTGTGGCTTAACA",19,119.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120Y F167E",2
"lib1","SARS-CoV-2","GTGTTGTGTTCCGACT",5,0.96,NA,NA,NA,NA,NA,NA,"stop","P7L A42L Y119* F167G",4
"lib1","SARS-CoV-2","GTGTTTAAAAAAAAAA",3,109.5,7.68,-3.09,0.21,1.5,1.21,0.01,"1 nonsynonymous","G172C",1
"lib1","SARS-CoV-2","GTGTTTAAAAATCTAC",5,168.01,10.58,-0.18,0.03,2.92,1.02,0,">1 nonsynonymous","Y66C K132L P197R",3
"lib1","SARS-CoV-2","GTGTTTAACTGTTGTA",1,46.01,10.35,-0.42,0.11,2.83,1.02,0,">1 nonsynonymous","R27K L60P",2
"lib1","SARS-CoV-2","GTGTTTAATTGGGAGC",3,49.05,10.15,-0.62,0.12,2.6,1.05,0.01,">1 nonsynonymous","E76T L122A",2
"lib1","SARS-CoV-2","GTGTTTACCCCTCATA",2,28.22,6.62,-4.14,0.46,1.5,1.12,0.04,">1 nonsynonymous","S19T A81I D97S",3
"lib1","SARS-CoV-2","GTGTTTACTATACCGA",5,53.39,6.07,-4.69,0.84,1.5,1.18,0.02,">1 nonsynonymous","Y91L N107F",2
"lib1","SARS-CoV-2","GTGTTTAGGGTCACCT",7,2.37,NA,NA,NA,NA,NA,NA,"stop","K56* N107L P149T E154I",4
"lib1","SARS-CoV-2","GTGTTTATAACGCTTG",4,34.03,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A22F V115G P161V F167I",4
"lib1","SARS-CoV-2","GTGTTTATTGTAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I142* G174R",2
"lib1","SARS-CoV-2","GTGTTTCAAAAACTAC",2,44.35,10.69,-0.07,0.09,2.92,1.06,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","GTGTTTCAACCGTGAA",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34K L57K Y66L G86C Y119C G166M",6
"lib1","SARS-CoV-2","GTGTTTCGGCAAAATG",5,7.69,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","S43L T55C L60R I80V F134I P169F",6
"lib1","SARS-CoV-2","GTGTTTCTAAGCCATT",1,46.57,6,-4.76,2,3,1.17,0,">1 nonsynonymous","I28S S43L F62G W106V",4
"lib1","SARS-CoV-2","GTGTTTCTATTTTACC",3,2.2,NA,NA,NA,NA,NA,NA,"stop","D34C E76* L125H F167Q",4
"lib1","SARS-CoV-2","GTGTTTGAAACTGTAT",5,88.81,10.02,-0.75,0.11,2.2,1.03,0,">1 nonsynonymous","W106V N120K K199V",3
"lib1","SARS-CoV-2","GTGTTTGAATAGTGAC",9,101.44,10.3,-0.47,0.05,2.92,1.01,0,">1 nonsynonymous","K26S C61L",2
"lib1","SARS-CoV-2","GTGTTTGCATGTAGCC",1,19.7,10.51,-0.25,0.06,2.97,1,0,">1 nonsynonymous","E10P Y178F",2
"lib1","SARS-CoV-2","GTGTTTGCTGTGCCCA",3,33.55,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","K94S F99Y G101V G172C",4
"lib1","SARS-CoV-2","GTGTTTGTAATTAGTT",1,30.43,10.64,-0.13,0.05,2.96,1.01,0,"1 nonsynonymous","S139Q",1
"lib1","SARS-CoV-2","GTGTTTGTGTATAGTA",1,7.38,6.23,-4.54,1.83,2.08,1.17,0.02,">1 nonsynonymous","N64L R127Q",2
"lib1","SARS-CoV-2","GTGTTTGTTCTCGACT",2,245.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45K S69E D98I",3
"lib1","SARS-CoV-2","GTGTTTTAGATTTAAT",1,38.26,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y165P Q168T V180S T201P",4
"lib1","SARS-CoV-2","GTGTTTTCCATTATGT",2,45.55,10.67,-0.09,0.08,2.86,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTGTTTTCTGGAGAAC",10,49.32,6.12,-4.65,1.14,1.5,1.36,0.03,">1 nonsynonymous","D90V D98I V103L",3
"lib1","SARS-CoV-2","GTGTTTTGAGACCTTT",6,41.18,10.67,-0.09,0.05,2.83,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAAAAAATAAAACA",2,17.33,7.9,-2.86,0.25,1.82,1.07,0.04,">1 nonsynonymous","G86S P169Q",2
"lib1","SARS-CoV-2","GTTAAAAAATTGAATT",2,30.01,6,-4.76,1.27,1.5,1.07,0,">1 nonsynonymous","L57V N64R Y178D",3
"lib1","SARS-CoV-2","GTTAAAAAATTTAGAT",6,81.26,10.27,-0.49,0.05,2.8,1.03,0,">1 nonsynonymous","T3K T15N E141Q",3
"lib1","SARS-CoV-2","GTTAAAAATCGCTAAA",5,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q Y50A I104D",3
"lib1","SARS-CoV-2","GTTAAAACCTATATAC",1,4.81,NA,NA,NA,NA,NA,NA,"stop","S41* P82G",2
"lib1","SARS-CoV-2","GTTAAAACGATAACAT",5,1.62,NA,NA,NA,NA,NA,NA,"stop","V103* G155C",2
"lib1","SARS-CoV-2","GTTAAAAGATAATAAC",4,50.1,10.72,-0.05,0.04,2.9,1.03,0,">1 nonsynonymous","L5A F62V T85A",3
"lib1","SARS-CoV-2","GTTAAAAGCTCTACTA",2,56.45,10.36,-0.4,0.06,2.91,1.05,0,"1 nonsynonymous","P169A",1
"lib1","SARS-CoV-2","GTTAAAAGGATACTAA",4,92.88,10.72,-0.04,0.09,2.84,1.07,0,"1 nonsynonymous","G196N",1
"lib1","SARS-CoV-2","GTTAAAAGTATGTGAT",3,79.83,10.65,-0.12,0.04,2.94,1.01,0,">1 nonsynonymous","E141S P149L",2
"lib1","SARS-CoV-2","GTTAAAAGTGCAGGCT",1,29.91,10.66,-0.1,0.05,2.94,1,0,"1 nonsynonymous","E154N",1
"lib1","SARS-CoV-2","GTTAAAAGTGTCAACG",4,86.63,10.41,-0.36,0.06,2.88,1.01,0,">1 nonsynonymous","T15A S129I",2
"lib1","SARS-CoV-2","GTTAAAAGTTAATTCT",4,17.01,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T46D Y91K I104K",3
"lib1","SARS-CoV-2","GTTAAAATAAGTATAC",6,179.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34R D112M K132M Q176T",4
"lib1","SARS-CoV-2","GTTAAAATCATGCAAT",6,29.89,7.71,-3.06,0.35,1.5,1.28,0.03,"1 nonsynonymous","I104N",1
"lib1","SARS-CoV-2","GTTAAAATTCTAGGAA",5,8.59,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N107I G152I",2
"lib1","SARS-CoV-2","GTTAAACAAAAAGCCT",2,52.98,10.83,0.06,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAAACAAATAGGCC",2,74.55,10.16,-0.61,0.09,2.59,1.02,0,">1 nonsynonymous","Y39V C61K R136L P149T",4
"lib1","SARS-CoV-2","GTTAAACAAGGGTACC",3,76.06,6.16,-4.61,0.5,1.5,1.12,0.01,">1 nonsynonymous","G9I Y35T R73L G83K L95F P133L",6
"lib1","SARS-CoV-2","GTTAAACCAATTAAAT",3,68.03,10.78,0.01,0.04,2.92,1.05,0,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","GTTAAACCACGAAAAT",6,1.81,NA,NA,NA,NA,NA,NA,"stop","S36H A42* G86D N151E",4
"lib1","SARS-CoV-2","GTTAAACCCGCCCCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F T85N Y93L L125Y L187I K199T",6
"lib1","SARS-CoV-2","GTTAAACCCGGACCAG",3,89.95,9.9,-0.86,0.08,2.53,1,0,">1 nonsynonymous","N64G Y178I",2
"lib1","SARS-CoV-2","GTTAAACGACTTATAA",5,171.29,10.44,-0.33,0.04,2.89,1.03,0,">1 nonsynonymous","L60S P149L",2
"lib1","SARS-CoV-2","GTTAAACGTGGTGTTG",2,12.04,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","A22F I72H A89I N107P",4
"lib1","SARS-CoV-2","GTTAAACTAACACTCA",6,38.39,10.69,-0.07,0.06,2.89,1.04,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","GTTAAACTACATCATA",6,0.03,NA,NA,NA,NA,NA,NA,"stop","G9Y C61S A105I R127* Y159R",5
"lib1","SARS-CoV-2","GTTAAACTAGAAACTT",6,4.41,NA,NA,NA,NA,NA,NA,"stop","P82* N110G",2
"lib1","SARS-CoV-2","GTTAAACTAGGATCAA",4,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F T15N G86C E141V P161K P169Y",6
"lib1","SARS-CoV-2","GTTAAACTAGTGAAAC",2,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F D34N T63S F126L",4
"lib1","SARS-CoV-2","GTTAAACTTAAAAAAC",2,5.84,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T46N G83P",2
"lib1","SARS-CoV-2","GTTAAAGAAATATAAT",6,56.47,9.21,-1.56,0.17,2,1.14,0.01,">1 nonsynonymous","N107T P149K",2
"lib1","SARS-CoV-2","GTTAAAGAATTGAAAC",1,5.14,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","V103W R124K P133A A190F T201M",5
"lib1","SARS-CoV-2","GTTAAAGACAGACGGT",5,20.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T100S Y143R",2
"lib1","SARS-CoV-2","GTTAAAGACGCATAAT",4,1300.62,10.17,-0.6,0.05,2.66,1.04,0,">1 nonsynonymous","A33W I88M",2
"lib1","SARS-CoV-2","GTTAAAGAGAACACAA",6,29.33,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A14S L95W R124Q",3
"lib1","SARS-CoV-2","GTTAAAGCCACAATAG",4,8.91,9.54,-1.22,0.19,1.94,1.1,0.02,">1 nonsynonymous","S36Y A42L N58P E141Y",4
"lib1","SARS-CoV-2","GTTAAAGGCAAAATTA",7,124.41,8.52,-2.25,0.25,1.5,1.05,0.02,"1 nonsynonymous","I72S",1
"lib1","SARS-CoV-2","GTTAAAGGCAAACGCG",4,48.98,9.53,-1.24,0.07,2.66,1.14,0,"1 nonsynonymous","G146E",1
"lib1","SARS-CoV-2","GTTAAATAACGGGTTA",11,66.19,10.61,-0.16,0.04,2.92,1.02,0,">1 nonsynonymous","E135S S200H",2
"lib1","SARS-CoV-2","GTTAAATAATCCCTCT",2,12.11,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","T3F T55H N64V Y123S L162A T201S",6
"lib1","SARS-CoV-2","GTTAAATACATTCGCA",5,1.22,NA,NA,NA,NA,NA,NA,"stop","F99* G146A Y165H P197T",4
"lib1","SARS-CoV-2","GTTAAATACCCGGTAC",3,0.36,NA,NA,NA,NA,NA,NA,"stop","W23S D34R G116R Y121* Y143N",5
"lib1","SARS-CoV-2","GTTAAATATGATAACT",2,57.37,9.75,-1.02,0.11,1.89,1.09,0,">1 nonsynonymous","P7I D59L K128T",3
"lib1","SARS-CoV-2","GTTAAATGTATTTAGT",4,89.47,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D112R Y119G",2
"lib1","SARS-CoV-2","GTTAAATGTTAAAGCG",4,55.72,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S139R C150H G174R T201K",4
"lib1","SARS-CoV-2","GTTAAATTCATTTAAA",1,38.03,10.78,0.02,0.15,2.64,1.33,0.01,">1 nonsynonymous","G9N Q144N",2
"lib1","SARS-CoV-2","GTTAAATTGCCGAATT",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R T55A N118H",3
"lib1","SARS-CoV-2","GTTAAATTGTCCTGAA",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R K56A T201S",3
"lib1","SARS-CoV-2","GTTAACAATATACACA",5,140.34,10.47,-0.3,0.04,2.9,1.03,0,">1 nonsynonymous","L5G Y121L",2
"lib1","SARS-CoV-2","GTTAACACCCATGCGC",6,146.59,9.54,-1.22,0.09,2.63,1.12,0,">1 nonsynonymous","L60E Q176H S200R",3
"lib1","SARS-CoV-2","GTTAACACTATGTCCT",1,12.52,7.85,-2.92,0.48,1.5,1.21,0.05,">1 nonsynonymous","T15R K56L S69F P149F",4
"lib1","SARS-CoV-2","GTTAACAGAACCGTAT",2,27.22,10.42,-0.34,0.09,2.89,1,0,">1 nonsynonymous","S41Y D98Y",2
"lib1","SARS-CoV-2","GTTAACATAAAACAAT",3,25.8,10.19,-0.58,0.12,2.8,1,0.01,">1 nonsynonymous","N4F A18T K114A L122H",4
"lib1","SARS-CoV-2","GTTAACATCACTTATA",3,7.22,6,-4.76,2,3,1.19,0,">1 nonsynonymous","C49A D68E T85H Y119M E135L P149H T170L",7
"lib1","SARS-CoV-2","GTTAACATTTAGTAAT",5,90.25,6.6,-4.16,0.46,1.5,1.18,0.02,">1 nonsynonymous","A14R L131Y Y178T",3
"lib1","SARS-CoV-2","GTTAACCAAAACTATA",11,28.07,10.13,-0.63,0.39,1.5,1.03,0.07,">1 nonsynonymous","A42L C61W N107Y",3
"lib1","SARS-CoV-2","GTTAACCGTCTACATA",4,37.64,10.1,-0.67,0.14,2.06,1.07,0.01,">1 nonsynonymous","V77W P197A",2
"lib1","SARS-CoV-2","GTTAACCTACAATGAA",2,7.48,6,-4.76,2,3,1.09,0,">1 nonsynonymous","T15R L122F E154G V180Y",4
"lib1","SARS-CoV-2","GTTAACGAAATCTGAA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","Y91M D98A I104P T201*",4
"lib1","SARS-CoV-2","GTTAACGAATCATTGT",5,60.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A22W R73K Y91R F160C",4
"lib1","SARS-CoV-2","GTTAACGACGGTTGAG",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N A22K G74R Y121V I142M P197G",6
"lib1","SARS-CoV-2","GTTAACGCATCCAAAC",1,62.9,10.82,0.06,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAACGTTAGTTAGC",8,126.81,10.7,-0.06,0.05,2.93,1.03,0,">1 nonsynonymous","K87Y K128T",2
"lib1","SARS-CoV-2","GTTAACTAAATCCAAA",1,29.9,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y39M D59F A89D A145V G152H N157A Q168D",7
"lib1","SARS-CoV-2","GTTAACTACTTCAACC",10,1.11,NA,NA,NA,NA,NA,NA,"stop","G9* V182K",2
"lib1","SARS-CoV-2","GTTAACTATGCAGCTA",3,27.38,10.82,0.05,0.1,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAACTCAGGACGAA",4,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y T85M K94Y Q168R S184R",5
"lib1","SARS-CoV-2","GTTAACTCATTATGCT",4,150.93,10.41,-0.35,0.04,2.89,1.03,0,">1 nonsynonymous","Y91N P191A",2
"lib1","SARS-CoV-2","GTTAACTTTACAATGG",3,0.6,NA,NA,NA,NA,NA,NA,"stop","I138L T148F G155N Q176*",4
"lib1","SARS-CoV-2","GTTAACTTTCAAAAAA",8,158,9.85,-0.91,0.11,2.08,1.08,0,">1 nonsynonymous","R25S T46I",2
"lib1","SARS-CoV-2","GTTAAGAAAAAGTCAA",3,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F G9V",2
"lib1","SARS-CoV-2","GTTAAGAAATAATTTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R C49K S53N N64S R78H A81S Y175D",7
"lib1","SARS-CoV-2","GTTAAGAAGATTGTTC",12,54.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95T E135Q G146S P161K",4
"lib1","SARS-CoV-2","GTTAAGACCAGGAAAG",5,77.32,10.68,-0.08,0.07,2.91,1.05,0,"1 nonsynonymous","S139E",1
"lib1","SARS-CoV-2","GTTAAGACCAGTCATT",2,0,NA,NA,NA,NA,NA,NA,"stop","A81T N107S K132Y F156* Y165*",5
"lib1","SARS-CoV-2","GTTAAGACTAAAAACT",6,119.68,10.65,-0.12,0.07,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAAGAGAGAAAAAT",11,178.38,6,-4.76,0.98,1.5,1.19,0.01,">1 nonsynonymous","L5E S36R Y93C",3
"lib1","SARS-CoV-2","GTTAAGAGTAGCCATA",6,53.64,6.11,-4.66,0.76,1.5,1.16,0.02,">1 nonsynonymous","C6H V37F R127Y",3
"lib1","SARS-CoV-2","GTTAAGATAAACAAAA",7,0.44,NA,NA,NA,NA,NA,NA,"stop","S43R N120F F156*",3
"lib1","SARS-CoV-2","GTTAAGATACAAAGTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N4L V11M S36L K128* P149Y",5
"lib1","SARS-CoV-2","GTTAAGATACAAGAAA",12,98.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36G Y123K P133S T140D E154Y",5
"lib1","SARS-CoV-2","GTTAAGATTCCCGGTC",1,65.03,10.86,0.09,0.07,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAAGCAGTAACATT",7,162.17,10.14,-0.63,0.07,2.7,1.04,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","GTTAAGCGATGATTAA",1,6.92,6,-4.76,2,3,1.02,0,">1 nonsynonymous","R27Q L95N",2
"lib1","SARS-CoV-2","GTTAAGCGGTTCTTGC",3,34.75,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12G Y35R D59S P82L N130A G146I",6
"lib1","SARS-CoV-2","GTTAAGCTGATCGCCT",2,12.59,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","D34P F99T D112S N120Q F167A",5
"lib1","SARS-CoV-2","GTTAAGGATAAATACC",2,36.86,8.64,-2.12,0.15,2.19,1.14,0.01,">1 nonsynonymous","D90Q D112L",2
"lib1","SARS-CoV-2","GTTAAGTAAGCGAGAA",2,91.94,8.55,-2.22,0.07,2.83,1.04,0,">1 nonsynonymous","G146D T170R",2
"lib1","SARS-CoV-2","GTTAAGTACTGTCTAA",11,1.07,NA,NA,NA,NA,NA,NA,"stop","P54*",1
"lib1","SARS-CoV-2","GTTAAGTCTCACAAAG",3,45.46,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S29A P82T L95T V115L D137H",5
"lib1","SARS-CoV-2","GTTAAGTGCAAATATC",4,32.46,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F8T C49W S69L F99I V115F N157A",6
"lib1","SARS-CoV-2","GTTAAGTGTTGACTCA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","L38* Y93L W106A N130H",4
"lib1","SARS-CoV-2","GTTAAGTTGCCGAATC",3,86.82,9.59,-1.18,0.14,1.9,1.16,0.01,">1 nonsynonymous","V32R S108N S129V",3
"lib1","SARS-CoV-2","GTTAAGTTTTATTCGG",1,6.73,6.88,-3.89,1.02,1.5,1,0.06,">1 nonsynonymous","N1R V20K R78C D137R S147C",5
"lib1","SARS-CoV-2","GTTAATAAAGCCATGG",5,2.18,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib1","SARS-CoV-2","GTTAATAAAGGTAAAC",27,9.13,NA,NA,NA,NA,NA,NA,"stop","N4L S41* P161Y",3
"lib1","SARS-CoV-2","GTTAATAACATACTGG",4,0.25,NA,NA,NA,NA,NA,NA,"stop","F8S I88* W106R I142S",4
"lib1","SARS-CoV-2","GTTAATAAGACATACT",2,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L A89C R127P S139L V173F",5
"lib1","SARS-CoV-2","GTTAATACGGTCACCA",13,161.53,9.77,-0.99,0.07,2.07,1.08,0,">1 nonsynonymous","K94G K114T",2
"lib1","SARS-CoV-2","GTTAATAGCATAGTAA",4,188.22,9.22,-1.54,0.08,2.75,1.15,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","GTTAATAGGGAACATA",10,60.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y21K I80V K114L N130F V153C",5
"lib1","SARS-CoV-2","GTTAATATAACCTTGA",9,56.46,10.24,-0.53,0.09,2.71,1,0,">1 nonsynonymous","E10R D98S Q163L",3
"lib1","SARS-CoV-2","GTTAATATAAGAAATG",2,11.63,6,-4.76,2,1.5,1.07,0.08,">1 nonsynonymous","C49L L131F Q176S",3
"lib1","SARS-CoV-2","GTTAATATCCTAAGTA",11,77.03,6,-4.76,0.87,1.5,1.17,0.01,">1 nonsynonymous","A81L F99L S113F",3
"lib1","SARS-CoV-2","GTTAATATCGGCTACA",2,76.51,9.66,-1.11,0.15,1.88,1.11,0.01,"1 nonsynonymous","I28R",1
"lib1","SARS-CoV-2","GTTAATATGTGAGATC",3,13.54,10.77,0,0.14,2.67,1.12,0.01,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","GTTAATATTAATTAGC",7,65.33,6.45,-4.31,0.69,1.5,1.32,0.04,">1 nonsynonymous","G9R Y93L L122N",3
"lib1","SARS-CoV-2","GTTAATATTTACCTAT",9,44.69,7.49,-3.28,0.46,1.5,1.1,0.07,">1 nonsynonymous","N4R T15C F62E N120W",4
"lib1","SARS-CoV-2","GTTAATCAACCCTCAG",1,73.96,9.27,-1.5,0.12,2.43,1.07,0.01,">1 nonsynonymous","A42G T55I L122V I142K",4
"lib1","SARS-CoV-2","GTTAATCAGCCTCTCC",23,116.82,8.37,-2.39,0.2,1.5,1.12,0.01,">1 nonsynonymous","W106L G152Y A192R",3
"lib1","SARS-CoV-2","GTTAATCAGGCAGGCT",3,73.79,10.53,-0.23,0.07,2.92,1.02,0,">1 nonsynonymous","V65A D90N K198G",3
"lib1","SARS-CoV-2","GTTAATCATATAAAAA",5,19.14,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","P82L K132S F185T",3
"lib1","SARS-CoV-2","GTTAATCATATCAGTG",6,59.12,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17T K56R I104T T148K",4
"lib1","SARS-CoV-2","GTTAATCCAATACAGA",1,11.6,10.86,0.1,0.1,2.81,1.16,0,">1 nonsynonymous","S147P V173F",2
"lib1","SARS-CoV-2","GTTAATCCCTCGCTCA",16,205.99,6,-4.76,1.27,1.5,1.15,0,">1 nonsynonymous","N24W R124M",2
"lib1","SARS-CoV-2","GTTAATCCGAACGTAA",2,30.91,9.71,-1.06,0.09,2.13,1.01,0,">1 nonsynonymous","K94N S164L",2
"lib1","SARS-CoV-2","GTTAATCGCTTTTCAA",12,5.37,NA,NA,NA,NA,NA,NA,"stop","C61T D68* N120K S147I",4
"lib1","SARS-CoV-2","GTTAATCTTGAAGCCA",5,27.26,8.11,-2.65,0.37,1.5,1,0.04,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","GTTAATGAATAGGCAA",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F C61K V180T",3
"lib1","SARS-CoV-2","GTTAATGGAAATTGAC",5,51.82,10.96,0.19,0.09,2.87,1.03,0,">1 nonsynonymous","V37G P54W",2
"lib1","SARS-CoV-2","GTTAATGTCAAAACTC",6,90.71,10.7,-0.07,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAATTAAGCATCAA",3,13.27,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G51R V65R P96Q N110L P149S E154W",6
"lib1","SARS-CoV-2","GTTAATTTAAAAAGCT",2,32.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7S K94F W106N R124V",4
"lib1","SARS-CoV-2","GTTAATTTACCCAAGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","GTTAATTTATGAAACG",4,84.8,10.15,-0.61,0.07,2.83,1,0,">1 nonsynonymous","N107P T148Y",2
"lib1","SARS-CoV-2","GTTAATTTGATGCTAT",1,12.54,6,-4.76,2,3,1.05,0,">1 nonsynonymous","C6M G83M K94L T100V",4
"lib1","SARS-CoV-2","GTTACAAACAGGTGTC",1,25.44,8.2,-2.57,0.21,2.43,1.1,0.02,">1 nonsynonymous","S36T V77L G146V",3
"lib1","SARS-CoV-2","GTTACAAAGCTAAAAA",8,1.06,NA,NA,NA,NA,NA,NA,"stop","L60P N64K T140*",3
"lib1","SARS-CoV-2","GTTACAAATTAACTCT",10,167.99,6,-4.76,1.22,1.5,1.14,0,">1 nonsynonymous","C61N N92M N107D I138R E154P",5
"lib1","SARS-CoV-2","GTTACAACACACCACG",1,30.02,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12V R16S T55N G86T L95R N107F D112T K132A N157G",9
"lib1","SARS-CoV-2","GTTACAACATCCAAAA",5,37.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91H G117S I142G G166T",4
"lib1","SARS-CoV-2","GTTACAACCATACATA",1,12.84,6.19,-4.57,2,1.5,1.16,0.03,">1 nonsynonymous","G86P W106S T201Y",3
"lib1","SARS-CoV-2","GTTACAACGGTAGTAC",2,6.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G83L L125N L162K",3
"lib1","SARS-CoV-2","GTTACAAGATCAAACG",4,59.74,8.43,-2.33,0.21,1.5,1.1,0.02,">1 nonsynonymous","L57W W106L V181L",3
"lib1","SARS-CoV-2","GTTACAAGCACATGCC",2,19.48,6,-4.76,0.7,3,1.05,0,">1 nonsynonymous","C61I F99C K128C R179V",4
"lib1","SARS-CoV-2","GTTACAATCCGTGACA",3,12.89,6.93,-3.83,0.46,1.5,1.06,0.07,">1 nonsynonymous","C6M D34V G51D C61M G146L",5
"lib1","SARS-CoV-2","GTTACACAAGCAATCG",1,15.78,10.86,0.09,0.08,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTACACACATAACAG",3,46.08,10.77,0.01,0.08,2.92,1.05,0,"1 nonsynonymous","P149E",1
"lib1","SARS-CoV-2","GTTACACCAATACGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L G86S I104D C150T K198A",5
"lib1","SARS-CoV-2","GTTACACCAATCATTA",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R I88G T140G P161G",4
"lib1","SARS-CoV-2","GTTACACCAGACAAAA",1,12.88,10.43,-0.33,0.1,3,1,0,">1 nonsynonymous","Y35T T201R",2
"lib1","SARS-CoV-2","GTTACACCCATTTTCT",3,48.95,9.96,-0.8,0.09,2.12,1.03,0,">1 nonsynonymous","D34R L60C R136K S200T",4
"lib1","SARS-CoV-2","GTTACACCGAACAAGT",6,56.79,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5H D112L N130E Y165T Q176L",5
"lib1","SARS-CoV-2","GTTACACGCATTAAGT",2,19.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14S K87C A105E G146R",4
"lib1","SARS-CoV-2","GTTACACTTATGGCTC",4,19.13,6.18,-4.59,1.56,1.5,1.3,0.07,">1 nonsynonymous","C49H F62K Y93Q",3
"lib1","SARS-CoV-2","GTTACAGATGGAATAC",1,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","GTTACAGTTCATTAAT",12,115.29,6.34,-4.42,0.28,1.5,1.11,0.01,">1 nonsynonymous","A14Y L162S",2
"lib1","SARS-CoV-2","GTTACATACGGCCCGA",2,38.19,6.1,-4.67,1.02,1.5,1.2,0.03,">1 nonsynonymous","V37A V65C D112Y G146S",4
"lib1","SARS-CoV-2","GTTACATCAGGTTAAG",4,103.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12P T55Y Y175T",3
"lib1","SARS-CoV-2","GTTACATCCAGACAAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N4H S43L S69Y Y91G Y123* G174K",6
"lib1","SARS-CoV-2","GTTACATTAAGTTAGT",6,17.44,6,-4.76,1.33,1.5,1.15,0.03,">1 nonsynonymous","N13K G152I R179I",3
"lib1","SARS-CoV-2","GTTACATTGTGACAAT",7,28.6,6,-4.76,1.42,1.5,1.16,0.03,">1 nonsynonymous","F44G G101P G116V",3
"lib1","SARS-CoV-2","GTTACCAACGCAACCT",4,127.52,10.83,0.06,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTACCAATTATGAAT",10,1.8,NA,NA,NA,NA,NA,NA,"stop","T63N V115C L162*",3
"lib1","SARS-CoV-2","GTTACCACCTCAATAG",14,218.88,9.59,-1.17,0.08,1.85,1.09,0,">1 nonsynonymous","Y35R A105Y T148V",3
"lib1","SARS-CoV-2","GTTACCACCTCTCCGT",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N L95Q A190V",3
"lib1","SARS-CoV-2","GTTACCAGCGGGCCTT",7,0.19,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib1","SARS-CoV-2","GTTACCCAATAAATTA",6,126.71,10.74,-0.02,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTACCCATAAATTAA",2,71.08,10.57,-0.19,0.04,2.97,1,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","GTTACCGAGCATACTA",11,307.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9S Y91A S113A Q176V",4
"lib1","SARS-CoV-2","GTTACCGATGCATAGG",7,154.9,9.97,-0.8,0.09,2.41,1.05,0,">1 nonsynonymous","E141M Y178S",2
"lib1","SARS-CoV-2","GTTACCGCATTGGCAT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","I28R S43I P96* A105S E135T",5
"lib1","SARS-CoV-2","GTTACCGCCTTCTAAC",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98V W106Y T148N G155E",4
"lib1","SARS-CoV-2","GTTACCGCGTAAGTAC",2,5.95,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","R27L P54T C61A D68Y T85V F156H A190N",7
"lib1","SARS-CoV-2","GTTACCGCTAGCTGAT",2,12.63,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y35V C158P S184K",3
"lib1","SARS-CoV-2","GTTACCGCTTCCTGAT",2,66.25,10.87,0.11,0.06,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTACCTCTAGGAATA",1,25.51,6.4,-4.36,0.43,1.5,1.16,0.01,">1 nonsynonymous","N30K F99R S184L",3
"lib1","SARS-CoV-2","GTTACCTGGAATAACA",1,56.13,6.15,-4.61,0.59,1.5,1.12,0.01,"1 nonsynonymous","P177M",1
"lib1","SARS-CoV-2","GTTACCTGGACGTTTT",1,43.78,6.14,-4.63,0.64,1.5,1.2,0.01,">1 nonsynonymous","K94H G116P G146C A190T",4
"lib1","SARS-CoV-2","GTTACCTGTTGATTCC",7,16.79,6,-4.76,1.17,3,1.23,0.02,">1 nonsynonymous","T15F Y91Q N130L F167Y S200L",5
"lib1","SARS-CoV-2","GTTACCTTCCATACCT",1,6.71,10.21,-0.56,0.13,2.65,1.04,0.01,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","GTTACGAAATTGCAAT",1,59.64,10.28,-0.48,0.05,2.93,1.02,0,"1 nonsynonymous","P169A",1
"lib1","SARS-CoV-2","GTTACGAATTTTCTTT",2,33.65,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N40S P54R T85C W106A D137P",5
"lib1","SARS-CoV-2","GTTACGACCCCACATT",3,3.53,NA,NA,NA,NA,NA,NA,"stop","A14* G51A",2
"lib1","SARS-CoV-2","GTTACGACTTTATATT",2,52.07,10.08,-0.68,0.04,2.81,1.05,0,">1 nonsynonymous","A14T V37N L111M",3
"lib1","SARS-CoV-2","GTTACGAGATGAAATT",2,16.77,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","S19R I28M K94C",3
"lib1","SARS-CoV-2","GTTACGAGTTCAAATC",1,41.66,10.26,-0.51,0.12,2.67,1.02,0.01,">1 nonsynonymous","N40R K56G E135G P149S",4
"lib1","SARS-CoV-2","GTTACGATTAAAAGTC",1,0.96,NA,NA,NA,NA,NA,NA,"stop","S45K C61F S69* S184I",4
"lib1","SARS-CoV-2","GTTACGCATTAGACTT",4,43.22,6.14,-4.62,0.78,1.5,1.15,0.03,">1 nonsynonymous","F47G F99L",2
"lib1","SARS-CoV-2","GTTACGCCGGCTGATT",3,11.23,9.9,-0.86,0.08,2.83,1.22,0,">1 nonsynonymous","K87F N110S T148N F156L",4
"lib1","SARS-CoV-2","GTTACGCTTCTACGCT",7,89.48,9.37,-1.4,0.17,1.58,1.15,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","GTTACGGAAACGTTAG",4,43.56,6,-4.76,1.33,1.5,1.17,0.01,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","GTTACGGAATCAATAA",1,14.89,8.61,-2.16,0.09,2.8,1.02,0.01,">1 nonsynonymous","D98N Q168K",2
"lib1","SARS-CoV-2","GTTACGGAGGCAAGAA",6,48.32,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107L Y121N C150V",3
"lib1","SARS-CoV-2","GTTACGGATATATCGG",17,402.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S29E L95E F126L",3
"lib1","SARS-CoV-2","GTTACGGCATGACGAG",3,59.94,7.24,-3.53,0.3,1.5,1.09,0.02,">1 nonsynonymous","F8C V37D F44S G174P",4
"lib1","SARS-CoV-2","GTTACGTATTAGAATC",1,32.14,10.58,-0.18,0.06,2.91,1.08,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","GTTACGTCTAATCATC",1,10.38,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","C49I G146N G155K G172R",4
"lib1","SARS-CoV-2","GTTACGTGGATGGTAA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N L95T A105V Q168T",4
"lib1","SARS-CoV-2","GTTACTAAAAAGATAT",1,20.39,10.81,0.05,0.07,2.95,1,0,"1 nonsynonymous","Q144K",1
"lib1","SARS-CoV-2","GTTACTAAACCATCCA",1,8.57,6,-4.76,2,1.5,1.16,0.04,"1 nonsynonymous","Q79P",1
"lib1","SARS-CoV-2","GTTACTAAACCCTTTA",4,49.82,9.81,-0.95,0.17,1.88,1.2,0.01,">1 nonsynonymous","C61L T100D P149Q",3
"lib1","SARS-CoV-2","GTTACTAAATTCCTTA",9,174.28,10.72,-0.05,0.04,2.93,1.04,0,">1 nonsynonymous","C61H T201V",2
"lib1","SARS-CoV-2","GTTACTAACTAAACAT",1,40.48,10.67,-0.09,0.08,2.78,1.05,0,">1 nonsynonymous","R27S N40G",2
"lib1","SARS-CoV-2","GTTACTAGACACAATT",1,25.26,10.62,-0.14,0.08,2.88,1.08,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","GTTACTAGCAGTTCGT",13,0.96,NA,NA,NA,NA,NA,NA,"stop","F47V K87N D98* V103F N110S",5
"lib1","SARS-CoV-2","GTTACTATAGAGTAGT",2,52.98,8.72,-2.04,0.2,1.78,1.09,0.01,">1 nonsynonymous","G9Y S36P N107Q",3
"lib1","SARS-CoV-2","GTTACTATATATACTC",2,38.24,9.49,-1.28,0.23,1.75,1.19,0.02,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","GTTACTCACACATATA",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y K94Y D112I",3
"lib1","SARS-CoV-2","GTTACTCACAGTTAAC",1,78.62,10.69,-0.07,0.08,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTACTCATATGTTTG",3,1.8,NA,NA,NA,NA,NA,NA,"stop","Y21F T140* F167G",3
"lib1","SARS-CoV-2","GTTACTCCAAGAAACT",4,40.2,9.45,-1.31,0.25,1.5,1.11,0.02,"1 nonsynonymous","K94P",1
"lib1","SARS-CoV-2","GTTACTCCGACAAGGG",1,30.2,10.11,-0.65,0.04,2.93,1,0,"1 nonsynonymous","N118Y",1
"lib1","SARS-CoV-2","GTTACTCGTACTTTCA",2,6.07,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L5K Y50P A81T L95E N120D",5
"lib1","SARS-CoV-2","GTTACTCTAATTACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y159* Y165T",2
"lib1","SARS-CoV-2","GTTACTCTCAACAGAA",6,27.68,9.4,-1.36,0.23,1.5,1,0.03,">1 nonsynonymous","C61M V181F",2
"lib1","SARS-CoV-2","GTTACTCTTGAACACA",7,12.83,6,-4.76,2,3,1.27,0.02,">1 nonsynonymous","A14I C61G G117Y D137F P191F",5
"lib1","SARS-CoV-2","GTTACTGAAGAACATA",1,36,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V37C I88N K114P",3
"lib1","SARS-CoV-2","GTTACTGATCACGCAT",2,22.07,8.87,-1.9,0.2,2.54,1.14,0.02,">1 nonsynonymous","F47T K56R C61N Q144D Q163R",5
"lib1","SARS-CoV-2","GTTACTGGACCAATCG",2,64.53,6,-4.76,1.49,1.5,1.12,0.02,">1 nonsynonymous","L38P T63Q P96G L125V S139I K198P",6
"lib1","SARS-CoV-2","GTTACTGGATCACAAA",2,35.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V20M D34Q K56G D98S",4
"lib1","SARS-CoV-2","GTTACTGGTAATGGTA",7,95.09,10.52,-0.24,0.04,2.93,1.01,0,">1 nonsynonymous","N1H F8M",2
"lib1","SARS-CoV-2","GTTACTTAAATATGAC",3,87.39,6.01,-4.75,0.65,1.5,1.18,0.01,">1 nonsynonymous","S43D I142F P177V T201D",4
"lib1","SARS-CoV-2","GTTACTTGTACAAACA",3,61.5,6.2,-4.56,0.69,1.5,1.14,0.02,">1 nonsynonymous","P161S Y175T",2
"lib1","SARS-CoV-2","GTTAGAAAAACCTCAA",8,125.89,8.49,-2.28,0.11,2.39,1.08,0,">1 nonsynonymous","C6V G116S G174L",3
"lib1","SARS-CoV-2","GTTAGAAAATACTGAA",4,0.35,NA,NA,NA,NA,NA,NA,"stop","K56S A81Q Y119L T201*",4
"lib1","SARS-CoV-2","GTTAGAAACAAGATTT",3,36.49,10.77,0.01,0.06,2.82,1.07,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","GTTAGAAACTTTGATA",6,87,9.23,-1.53,0.09,2.02,1.07,0,">1 nonsynonymous","N107K L122S S139D",3
"lib1","SARS-CoV-2","GTTAGAAATAAACCAA",1,54.37,6.37,-4.39,0.5,1.5,1.21,0.02,">1 nonsynonymous","V37L S53A C150K E154D V173D",5
"lib1","SARS-CoV-2","GTTAGAAATAATCTTT",9,141.23,10.7,-0.07,0.05,2.91,1.05,0,">1 nonsynonymous","S139D F160A",2
"lib1","SARS-CoV-2","GTTAGAAATATTTACT",3,40.76,9.5,-1.26,0.26,1.83,1.15,0.03,">1 nonsynonymous","V11L W106G",2
"lib1","SARS-CoV-2","GTTAGAACAATTAACA",3,39.97,6,-4.76,0.89,1.5,1.12,0.01,">1 nonsynonymous","S41Q Q84E G146A G152P F160T Q168T T201L",7
"lib1","SARS-CoV-2","GTTAGAACACATCAGT",1,25.07,9.53,-1.23,0.15,1.7,1.15,0.01,">1 nonsynonymous","F12N P197Q",2
"lib1","SARS-CoV-2","GTTAGAACGTCATACT",12,116.08,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N4S K26V L95Y K132P A190S",5
"lib1","SARS-CoV-2","GTTAGAACTGGCATAT",6,69.31,10.7,-0.06,0.06,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTAGAATACGAAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4R S43W K87* W106C T148N F160V T170S",7
"lib1","SARS-CoV-2","GTTAGAATCCCATATA",1,9.24,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1H F99N",2
"lib1","SARS-CoV-2","GTTAGAATTCCCGAAG",1,9.16,9.86,-0.91,0.21,2.77,1.18,0.01,">1 nonsynonymous","S41I K87R F99S N107S",4
"lib1","SARS-CoV-2","GTTAGACACACCTTAA",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K N107H K132L P149R",4
"lib1","SARS-CoV-2","GTTAGACACGCCTCTT",9,108.79,10.44,-0.32,0.07,2.9,1.04,0,">1 nonsynonymous","L5P V37M T100D",3
"lib1","SARS-CoV-2","GTTAGACACTACACCG",4,126.52,10.77,0.01,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAGACACTCGAACA",2,20.72,10.77,0,0.05,2.96,1.02,0,"1 nonsynonymous","S53M",1
"lib1","SARS-CoV-2","GTTAGACCTTGACCAG",5,43.02,6,-4.76,1.89,1.5,1.13,0.01,">1 nonsynonymous","N64P D90P",2
"lib1","SARS-CoV-2","GTTAGACGCAACTCCC",1,61.84,9.96,-0.8,0.07,2.77,1.06,0,"1 nonsynonymous","G146Y",1
"lib1","SARS-CoV-2","GTTAGACGCGCTTCAA",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I W106S R136A Q144L",4
"lib1","SARS-CoV-2","GTTAGACTACTCTATT",1,38.4,8.97,-1.8,0.08,2.75,1.1,0,">1 nonsynonymous","G117F K128T",2
"lib1","SARS-CoV-2","GTTAGACTCGAAGCAC",2,73.41,7.81,-2.95,0.14,1.86,1.16,0.01,">1 nonsynonymous","Y143E F160D N171S",3
"lib1","SARS-CoV-2","GTTAGAGAAAATGAGC",8,1.67,NA,NA,NA,NA,NA,NA,"stop","K56* I80L T201S",3
"lib1","SARS-CoV-2","GTTAGAGAATCACGCC",5,112.54,10.51,-0.25,0.04,2.94,1.01,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","GTTAGAGCATGGCCTT",2,23.6,10.75,-0.02,0.12,2.87,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAGATCTGTATCAG",3,73.87,10.19,-0.58,0.12,2.3,1.03,0.01,">1 nonsynonymous","W106S K198Q",2
"lib1","SARS-CoV-2","GTTAGATTCTATTAAC",4,51.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14L C31K Q84S P96Y R124H F134T",6
"lib1","SARS-CoV-2","GTTAGATTGGTTCAAC",1,20.49,9.38,-1.38,0.17,2.95,1.03,0.02,">1 nonsynonymous","Y39V T63Y I138N F160R G166V K198S",6
"lib1","SARS-CoV-2","GTTAGCAAATAACCAC",8,3.11,NA,NA,NA,NA,NA,NA,"stop","Y39N L57* N64S L131*",4
"lib1","SARS-CoV-2","GTTAGCAAGCGTAACC",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L G146Q K198I",3
"lib1","SARS-CoV-2","GTTAGCAATCTACGAA",1,15.58,9,-1.77,0.21,1.5,1,0.03,">1 nonsynonymous","A33E Q84H L122E P169T",4
"lib1","SARS-CoV-2","GTTAGCACGTAAATCT",5,84.92,8.33,-2.43,0.14,2.25,1.09,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","GTTAGCACGTTCCTCG",6,132.42,10.66,-0.1,0.05,2.85,1.07,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","GTTAGCACTAATGGCT",3,1.24,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib1","SARS-CoV-2","GTTAGCACTACTAAAA",1,8.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N30M Y91N C102Y W106I",4
"lib1","SARS-CoV-2","GTTAGCACTTGACTTG",3,64.19,10.61,-0.15,0.05,2.91,1.04,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","GTTAGCAGACACGGCC",2,19.12,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A14S S29H F47E S113E F160G T201M",6
"lib1","SARS-CoV-2","GTTAGCCAGACAGACA",3,5.06,NA,NA,NA,NA,NA,NA,"stop","R27W V52A T100* V181I",4
"lib1","SARS-CoV-2","GTTAGCCCACTTTTGA",5,18.85,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","L38H S53A K94M",3
"lib1","SARS-CoV-2","GTTAGCCCTTTGCCGA",1,16.22,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V52N I88R E141F A145E",4
"lib1","SARS-CoV-2","GTTAGCCGAAAAACGC",1,9.66,11.03,0.26,0.03,3,1,0,"1 nonsynonymous","L122A",1
"lib1","SARS-CoV-2","GTTAGCCGTATCGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y Q176R",2
"lib1","SARS-CoV-2","GTTAGCCTTTTTTTCG",1,22.1,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N64H G146V N157I",3
"lib1","SARS-CoV-2","GTTAGCGCACTTACGT",3,20.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V32L S41M D68R S113P N118L Y159L P197K",7
"lib1","SARS-CoV-2","GTTAGCGCTACGATCC",2,34.72,10.4,-0.36,0.04,2.95,1.04,0,">1 nonsynonymous","I2Y Y39P",2
"lib1","SARS-CoV-2","GTTAGCGGGGAAAACT",3,52.31,10.72,-0.05,0.05,2.97,1,0,"1 nonsynonymous","N40P",1
"lib1","SARS-CoV-2","GTTAGCGTAGTAACGT",4,10.01,6,-4.76,2,3,1.05,0,">1 nonsynonymous","C6A D68K D98W E135L",4
"lib1","SARS-CoV-2","GTTAGCTAACGAATGC",1,49.02,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9Q V32Y G86R E141K",4
"lib1","SARS-CoV-2","GTTAGCTACTGCATTT",1,23.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12C A81L R127S R136W",4
"lib1","SARS-CoV-2","GTTAGCTAGGATACTT",7,105.69,6.96,-3.8,0.3,1.5,1.13,0.02,">1 nonsynonymous","V11F Y91E",2
"lib1","SARS-CoV-2","GTTAGCTATTCTAGTA",3,36.65,8.19,-2.58,0.38,1.5,1.2,0.04,">1 nonsynonymous","I80F V173K",2
"lib1","SARS-CoV-2","GTTAGCTCGAACTTTC",1,49.93,9.38,-1.39,0.08,2.91,1.08,0,">1 nonsynonymous","C61T Y119N",2
"lib1","SARS-CoV-2","GTTAGGAACAACCATT",2,58.55,8.35,-2.41,0.12,2.44,1.09,0.01,">1 nonsynonymous","R78T Q176V",2
"lib1","SARS-CoV-2","GTTAGGAAGAATTAAA",5,74.13,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","C61V G117L R124G G146D",4
"lib1","SARS-CoV-2","GTTAGGAATAGGTACG",3,90.83,8.98,-1.78,0.24,1.5,1.02,0.02,">1 nonsynonymous","V11S A105G L122Y",3
"lib1","SARS-CoV-2","GTTAGGAATATTCGCT",1,25.19,7.72,-3.04,0.15,1.62,1.03,0.01,">1 nonsynonymous","T148S N157I",2
"lib1","SARS-CoV-2","GTTAGGACCTATCGAT",8,91.04,10.73,-0.04,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTAGGAGGTGAATCT",14,202.56,10.62,-0.15,0.04,2.93,1.02,0,">1 nonsynonymous","P54V P96S T201R",3
"lib1","SARS-CoV-2","GTTAGGAGTATTGTCA",4,61.14,7.22,-3.54,0.2,1.5,1.13,0.01,">1 nonsynonymous","T15K N64P N107T S129A V173C A190S",6
"lib1","SARS-CoV-2","GTTAGGATAGCCCAAT",3,18.26,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35S G51S N157S",3
"lib1","SARS-CoV-2","GTTAGGCTGAGATTAA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","L38F D90* G101R Q168L",4
"lib1","SARS-CoV-2","GTTAGGGAGTTATCCC",5,34.87,10.81,0.05,0.05,2.97,1.03,0,"1 nonsynonymous","T85K",1
"lib1","SARS-CoV-2","GTTAGGGCCAGAGACG",2,23.98,7.72,-3.04,0.43,1.5,1.07,0.06,">1 nonsynonymous","V77Y G116S",2
"lib1","SARS-CoV-2","GTTAGGTCGCCGCGAG",5,85.99,10.1,-0.66,0.06,2.8,1.02,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","GTTAGTAAGCTAAAAG",1,17.7,10.3,-0.47,0.08,2.63,1.01,0,">1 nonsynonymous","N4W L60E",2
"lib1","SARS-CoV-2","GTTAGTAATCCAGGAT",2,31.24,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","A14S C61L D68R E141T",4
"lib1","SARS-CoV-2","GTTAGTACTAATGCGA",3,11.7,6.39,-4.38,0.98,1.87,1.19,0.05,">1 nonsynonymous","N40T E76Y T85S D98I",4
"lib1","SARS-CoV-2","GTTAGTACTCAGGATT",6,4.52,NA,NA,NA,NA,NA,NA,"stop","N107* G117R",2
"lib1","SARS-CoV-2","GTTAGTAGTCCTTCGT",3,28.84,9.09,-1.67,0.14,1.66,1.12,0.01,">1 nonsynonymous","C6K R16N D34L T201K",4
"lib1","SARS-CoV-2","GTTAGTATACGTTACT",4,86.32,10.23,-0.53,0.04,2.89,1,0,">1 nonsynonymous","L60P C61Y",2
"lib1","SARS-CoV-2","GTTAGTATCTTCTCGG",1,0.36,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","GTTAGTCACTGGACTT",6,79.54,6.87,-3.9,0.31,1.5,1.13,0.02,">1 nonsynonymous","F62C D98N N151V V181Y",4
"lib1","SARS-CoV-2","GTTAGTCCTTTATTGA",12,159.1,10.4,-0.37,0.03,2.9,1.04,0,"1 nonsynonymous","P169N",1
"lib1","SARS-CoV-2","GTTAGTCTAAATGTTA",3,49.92,6.03,-4.73,1.04,1.5,1.16,0.02,">1 nonsynonymous","A14G F44W C49K V77H P177F",5
"lib1","SARS-CoV-2","GTTAGTGCAATTCGTT",3,27.97,10.79,0.03,0.08,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTAGTGCGACGATTG",6,175.08,10.66,-0.1,0.03,2.94,1.02,0,">1 nonsynonymous","S41M T63R",2
"lib1","SARS-CoV-2","GTTAGTGTGGTTCCTT",5,1.34,NA,NA,NA,NA,NA,NA,"stop","K48Q Y91* C158R",3
"lib1","SARS-CoV-2","GTTAGTTTGACAATCA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","A89L G166*",2
"lib1","SARS-CoV-2","GTTAGTTTGTAAAGTT",5,48.62,10.23,-0.53,0.06,2.79,1.02,0,">1 nonsynonymous","C6N K128A T201V",3
"lib1","SARS-CoV-2","GTTATAAAAGCCGTAA",1,23.55,9.76,-1,0.18,2.01,1.07,0.02,">1 nonsynonymous","C49F T55F K87H D97C K128N",5
"lib1","SARS-CoV-2","GTTATAAAAGCTAAGG",3,7.91,6.31,-4.46,2,1.5,1.14,0.03,">1 nonsynonymous","C6N N58S L95G E141N",4
"lib1","SARS-CoV-2","GTTATAAAATAGAATA",2,22.84,6,-4.76,0.96,1.5,1.11,0,">1 nonsynonymous","L57Y G101S L131S R179F",4
"lib1","SARS-CoV-2","GTTATAAAATCGCTTA",2,49.66,8.91,-1.86,0.09,2.66,1.14,0,">1 nonsynonymous","S36I Y119M T193R",3
"lib1","SARS-CoV-2","GTTATAAACAAGTATA",8,77.18,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12E K26E N64K L95E",4
"lib1","SARS-CoV-2","GTTATAACCAAACGTA",5,3.18,NA,NA,NA,NA,NA,NA,"stop","K114* L131S A145S F156D",4
"lib1","SARS-CoV-2","GTTATAACCGTCCGAT",2,61.5,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S36F A67P E141M",3
"lib1","SARS-CoV-2","GTTATAACCTGAATGC",4,0.52,NA,NA,NA,NA,NA,NA,"stop","I28K L57* T85M N107F N120L R179H",6
"lib1","SARS-CoV-2","GTTATAACGACACTCT",22,149.57,6,-4.76,1.05,1.5,1.18,0.01,">1 nonsynonymous","V77R G116V Y165F",3
"lib1","SARS-CoV-2","GTTATAACTAAAAGTA",6,69.29,10.76,0,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTATAACTATGCTGT",4,1.91,NA,NA,NA,NA,NA,NA,"stop","L38* Q84C N110M S129R",4
"lib1","SARS-CoV-2","GTTATAACTCAAGACA",4,30.41,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","K26G D98L Y165S",3
"lib1","SARS-CoV-2","GTTATAACTCATGGTA",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W T85S F99Q S108P N120R",5
"lib1","SARS-CoV-2","GTTATAACTTCAAATT",4,21.1,10.1,-0.66,0.2,2.68,1,0.02,">1 nonsynonymous","F8W A14S T46C",3
"lib1","SARS-CoV-2","GTTATAACTTTCAACA",5,0.97,NA,NA,NA,NA,NA,NA,"stop","K87F I138*",2
"lib1","SARS-CoV-2","GTTATAACTTTGATCA",4,91.69,10.35,-0.42,0.05,2.91,1,0,"1 nonsynonymous","P7F",1
"lib1","SARS-CoV-2","GTTATAAGAATATGTT",6,61.62,9.59,-1.18,0.1,2.29,1.06,0,">1 nonsynonymous","C6D D90T",2
"lib1","SARS-CoV-2","GTTATAAGATAAATTA",2,15.61,9.85,-0.91,0.14,1.85,1.1,0.01,">1 nonsynonymous","T55S G83D E186I",3
"lib1","SARS-CoV-2","GTTATAAGGACACAAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N92*",1
"lib1","SARS-CoV-2","GTTATAAGTATCCGTG",3,57.91,8.78,-1.98,0.27,1.5,1.07,0.03,">1 nonsynonymous","N4I T63V N120S Y165F",4
"lib1","SARS-CoV-2","GTTATAATAACTATGA",6,1.74,NA,NA,NA,NA,NA,NA,"stop","N120M Y143*",2
"lib1","SARS-CoV-2","GTTATAATTCATAGGC",1,20.35,8.4,-2.37,0.24,1.51,1.04,0.02,">1 nonsynonymous","R27V P96Q G117S N130V",4
"lib1","SARS-CoV-2","GTTATACAAACGATAA",2,59.24,10.85,0.09,0.06,2.97,1,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","GTTATACTAGGTTCTA",1,28.81,10.71,-0.05,0.05,2.95,1.05,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","GTTATACTTACTAAGT",3,67.61,8.97,-1.8,0.13,1.84,1.19,0.01,">1 nonsynonymous","Y91T S129C",2
"lib1","SARS-CoV-2","GTTATAGACTAGAACT",1,29.58,10.13,-0.63,0.09,2.65,1,0,">1 nonsynonymous","N40D L57S",2
"lib1","SARS-CoV-2","GTTATAGCTACCCTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14T S184*",2
"lib1","SARS-CoV-2","GTTATAGTCCATAAGC",12,56.79,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A22P G172N",2
"lib1","SARS-CoV-2","GTTATATAAAATGTTA",6,23.84,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","V37N F47S T63Y I72F G86V",5
"lib1","SARS-CoV-2","GTTATATAAAGTATTT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","I142* Q168E V173D",3
"lib1","SARS-CoV-2","GTTATATAGTTCCACC",2,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R P54N F62P G152Y",4
"lib1","SARS-CoV-2","GTTATATATTAAATAA",4,72.99,10.78,0.01,0.04,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTATATCACAGTATA",3,37.71,10.8,0.04,0.12,2.89,1.04,0.01,">1 nonsynonymous","I2R T55L",2
"lib1","SARS-CoV-2","GTTATATCTGCCAACA",1,19.62,10.03,-0.74,0.06,2.93,1,0,">1 nonsynonymous","N130L I138S F156L",3
"lib1","SARS-CoV-2","GTTATATGTTAAACAA",3,40.94,6.27,-4.49,0.58,2.33,1.31,0.01,">1 nonsynonymous","N24R V32G K94V T100L K128I",5
"lib1","SARS-CoV-2","GTTATCAACCACCGAT",5,14.08,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","T3Q R25K P54K P82V D90L",5
"lib1","SARS-CoV-2","GTTATCAAGTGATTGT",7,153.3,10.15,-0.62,0.02,2.91,1.01,0,">1 nonsynonymous","D90Y H189Y",2
"lib1","SARS-CoV-2","GTTATCAATTCTCTAA",12,109.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y66S F99D",2
"lib1","SARS-CoV-2","GTTATCACTTTTCCAG",4,52.34,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K26L C49L T63R V103L V153Y N171K",6
"lib1","SARS-CoV-2","GTTATCATAAACCAGT",3,34.6,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A14G N157V",2
"lib1","SARS-CoV-2","GTTATCATGTAACCAT",2,13.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F17P A33G D98R C102A N151T",5
"lib1","SARS-CoV-2","GTTATCATGTACAGGA",3,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T C61K D90P F99V N110M G146A T170F",7
"lib1","SARS-CoV-2","GTTATCATTACGTTCG",12,229.17,8.67,-2.09,0.09,2.93,1.03,0,">1 nonsynonymous","P7S Y39S S53D N157T V173E",5
"lib1","SARS-CoV-2","GTTATCCACACCTAAA",4,13.24,6.08,-4.68,2,1.5,1.05,0.01,">1 nonsynonymous","S19A N58E V77T A89F",4
"lib1","SARS-CoV-2","GTTATCCAGCCATAAG",8,66.81,6,-4.76,1.5,1.5,1.18,0.02,">1 nonsynonymous","G116W D137V R179S",3
"lib1","SARS-CoV-2","GTTATCCATACTCCTC",2,86.31,8.25,-2.51,0.15,1.85,1.14,0.01,"1 nonsynonymous","Y165P",1
"lib1","SARS-CoV-2","GTTATCCGATGAGGTC",2,18.24,9.97,-0.79,0.28,1.7,1.05,0.04,">1 nonsynonymous","A81S W106T",2
"lib1","SARS-CoV-2","GTTATCCGATTGCAAA",7,150.13,10.29,-0.48,0.05,2.92,1.02,0,">1 nonsynonymous","S41R T63L V77L T201Q",4
"lib1","SARS-CoV-2","GTTATCCTACCGCTGG",2,50.3,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","A105N E154A G172E",3
"lib1","SARS-CoV-2","GTTATCCTCACAAGAC",1,68.78,10.43,-0.33,0.06,2.94,1.02,0,">1 nonsynonymous","G9L I142L",2
"lib1","SARS-CoV-2","GTTATCCTTAAGAACG",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H S45G D112Q E135H I142V Q163S",6
"lib1","SARS-CoV-2","GTTATCGAATCGCTTG",2,17.68,10.42,-0.34,0.1,2.93,1.05,0,"1 nonsynonymous","A42P",1
"lib1","SARS-CoV-2","GTTATCGATGCTGAAT",4,18.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7M S41Y G83W G117L Y143L",5
"lib1","SARS-CoV-2","GTTATCGATTAACGAA",7,1,NA,NA,NA,NA,NA,NA,"stop","N24* E76R V103L N109S E141S",5
"lib1","SARS-CoV-2","GTTATCGCATAAAGCT",5,13.6,9.79,-0.97,0.11,3,1.02,0.01,"1 nonsynonymous","Y143W",1
"lib1","SARS-CoV-2","GTTATCGCTTCAACAA",5,32.77,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50A G74P Q84C D97S P133V G155P",6
"lib1","SARS-CoV-2","GTTATCGTTTAAAATA",1,21.51,10.92,0.16,0.08,3,1,0,"1 nonsynonymous","I28W",1
"lib1","SARS-CoV-2","GTTATCTACATAGACT",8,127.9,10.17,-0.6,0.07,2.59,1.03,0,"1 nonsynonymous","V77C",1
"lib1","SARS-CoV-2","GTTATCTACGTTCAGC",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89N A145I V182C",3
"lib1","SARS-CoV-2","GTTATCTAGGCATACA",2,5.32,10.79,0.03,0.38,2.79,1.01,0.04,">1 nonsynonymous","S41T T85N V173E",3
"lib1","SARS-CoV-2","GTTATCTAGTGATAAA",5,18.74,8.93,-1.84,0.15,1.77,1.16,0.03,">1 nonsynonymous","T15N G74Y",2
"lib1","SARS-CoV-2","GTTATCTCCCACCCTA",8,28.07,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","G86D P96S W106V N120E A145Y",5
"lib1","SARS-CoV-2","GTTATCTTACGAAGTT",2,33.52,10.68,-0.09,0.07,2.9,1.06,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","GTTATCTTGCTTAATG",7,19.68,8.36,-2.4,0.31,1.5,1.13,0.03,"1 nonsynonymous","A89L",1
"lib1","SARS-CoV-2","GTTATGAAACCCCACC",9,122.54,9.47,-1.29,0.08,2.56,1.11,0,">1 nonsynonymous","I88M F156H",2
"lib1","SARS-CoV-2","GTTATGAAGTCATCTA",9,78.48,9.74,-1.03,0.15,1.84,1.1,0.01,">1 nonsynonymous","G9R E76F",2
"lib1","SARS-CoV-2","GTTATGAAGTTAACTG",1,0.24,NA,NA,NA,NA,NA,NA,"stop","F44S A81* K128I T140*",4
"lib1","SARS-CoV-2","GTTATGACTCGCCGAT",4,41.36,8.69,-2.07,0.18,1.59,1.12,0.01,">1 nonsynonymous","V20S N40R I104L F160A",4
"lib1","SARS-CoV-2","GTTATGACTTAAAGAA",6,90.51,6,-4.76,2,3,1.16,0,">1 nonsynonymous","A81F N107R R136S A145M",4
"lib1","SARS-CoV-2","GTTATGATTAAACCCG",3,45.03,10.29,-0.47,0.03,2.91,1.01,0,"1 nonsynonymous","Y91W",1
"lib1","SARS-CoV-2","GTTATGATTGAATTTG",1,6.3,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","K48G F99V I104N",3
"lib1","SARS-CoV-2","GTTATGCATGCCCGGA",3,54.11,10.25,-0.52,0.07,2.86,1.01,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","GTTATGCCAACGCAAC",4,131.02,8.65,-2.11,0.14,1.97,1.09,0.01,">1 nonsynonymous","R73P D98I",2
"lib1","SARS-CoV-2","GTTATGCCGACCCAAG",9,113.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86L S139H G152C F156S A192T T201L",6
"lib1","SARS-CoV-2","GTTATGCCGCCCCACA",2,29.17,10.35,-0.42,0.06,2.95,1,0,">1 nonsynonymous","K26C N58S",2
"lib1","SARS-CoV-2","GTTATGCTACAATTCA",1,37.54,10.19,-0.58,0.09,2.86,1,0,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","GTTATGCTAGGGAGAT",3,20.14,7.45,-3.31,0.37,1.5,1.04,0.04,">1 nonsynonymous","C49T P82L",2
"lib1","SARS-CoV-2","GTTATGCTTTAATAGT",3,16.85,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","L95T W106E Y143W",3
"lib1","SARS-CoV-2","GTTATGGAAGCGAACA",8,1.78,NA,NA,NA,NA,NA,NA,"stop","R16G F44I S69D G146* G174Q",5
"lib1","SARS-CoV-2","GTTATGGATGCTATCA",6,110.32,10.2,-0.56,0.05,2.78,1,0,"1 nonsynonymous","E10W",1
"lib1","SARS-CoV-2","GTTATGGCATAATGAT",1,45.24,6,-4.76,2,3,1.2,0,">1 nonsynonymous","P82I N118I T140K",3
"lib1","SARS-CoV-2","GTTATGGTGAAGGATG",2,33.37,6.17,-4.6,0.71,1.5,1.15,0.02,">1 nonsynonymous","R136Y I142G N157T",3
"lib1","SARS-CoV-2","GTTATGTGTCAAATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P F17S N58F T85A N107T",5
"lib1","SARS-CoV-2","GTTATGTGTTTGAATG",4,59.79,6.04,-4.72,0.42,1.5,1.12,0,">1 nonsynonymous","G9V G117P P177S L187S",4
"lib1","SARS-CoV-2","GTTATGTTCTTCGCGA",2,28.33,6,-4.76,2,3,1.18,0,">1 nonsynonymous","G86S D112S",2
"lib1","SARS-CoV-2","GTTATTAACCAAGCTG",2,27.48,10.01,-0.76,0.08,2.72,1.03,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","GTTATTAACCGCGCAA",2,23.41,8.86,-1.9,0.19,2,1.16,0.02,">1 nonsynonymous","N4S A89F",2
"lib1","SARS-CoV-2","GTTATTAAGCAACCTG",1,25.47,10.78,0.02,0.06,2.91,1,0,">1 nonsynonymous","N1Y C61K",2
"lib1","SARS-CoV-2","GTTATTAAGGACCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R S19* V103*",3
"lib1","SARS-CoV-2","GTTATTACAATAATTA",1,21.38,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I2Y G86L Q144G",3
"lib1","SARS-CoV-2","GTTATTACATTCACCA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F T15L T55P V65N",4
"lib1","SARS-CoV-2","GTTATTAGAAACAAAT",1,11.29,6.95,-3.81,0.23,1.95,1.23,0.02,">1 nonsynonymous","T3L D97L N107I",3
"lib1","SARS-CoV-2","GTTATTATAAAAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44T N92* V103R",3
"lib1","SARS-CoV-2","GTTATTATACAGCAAA",4,48.63,8.67,-2.09,0.1,2.96,1.04,0,">1 nonsynonymous","E10A Y35F S113R",3
"lib1","SARS-CoV-2","GTTATTATTATTAGGA",5,33.46,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y123V Q168K F185A",3
"lib1","SARS-CoV-2","GTTATTCCAGCCCCAC",2,70.28,8.23,-2.53,0.15,2.39,1.05,0.01,">1 nonsynonymous","C6S T15L N30L G174I",4
"lib1","SARS-CoV-2","GTTATTCCATCCTCGG",2,1.04,NA,NA,NA,NA,NA,NA,"stop","W23A Y119C F167P Y175S K198*",5
"lib1","SARS-CoV-2","GTTATTCCTCGTTCAC",7,2.75,NA,NA,NA,NA,NA,NA,"stop","I2V S36L Y93D T148*",4
"lib1","SARS-CoV-2","GTTATTCGAATTAGAT",6,19.64,7.07,-3.7,0.38,1.5,1.03,0.06,">1 nonsynonymous","T55P V77K I80W N120M G146F L162D P197L",7
"lib1","SARS-CoV-2","GTTATTCTTTGGACAA",8,24.65,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","K48A T100A C102H",3
"lib1","SARS-CoV-2","GTTATTGAACGCAACC",2,36.48,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91M S113K N157S",3
"lib1","SARS-CoV-2","GTTATTGGATACTAAC",1,48.67,6.3,-4.46,0.84,1.5,1.16,0.05,">1 nonsynonymous","C6N T55N F99C Y175N",4
"lib1","SARS-CoV-2","GTTATTTGTGCTGTGC",3,19.2,10.04,-0.72,0.13,2.78,1,0,"1 nonsynonymous","N40I",1
"lib1","SARS-CoV-2","GTTATTTGTTGTATAG",1,8.46,6,-4.76,1.99,1.5,1.14,0.02,">1 nonsynonymous","N64S I88L D137G P197T",4
"lib1","SARS-CoV-2","GTTATTTTACAATGAT",7,42.1,9.32,-1.45,0.26,1.5,1,0.04,"1 nonsynonymous","A105K",1
"lib1","SARS-CoV-2","GTTCAAAAAAACGGAA",4,17.55,9.96,-0.8,0.21,2.3,1.01,0.01,">1 nonsynonymous","E10N C49F L122S",3
"lib1","SARS-CoV-2","GTTCAAAAAATCAGCA",2,15.46,10.9,0.13,0.19,2.79,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTTCAAAAACTAGGGC",1,48.52,10.57,-0.19,0.04,3,1,0,">1 nonsynonymous","L5A Y39W V65A S200N",4
"lib1","SARS-CoV-2","GTTCAAAAAGTCCTGA",5,2.58,NA,NA,NA,NA,NA,NA,"stop","S29R K87R P96C Y123* F156L K199S",6
"lib1","SARS-CoV-2","GTTCAAAATAATCCCA",2,59.87,8.66,-2.1,0.14,1.5,1.08,0.01,">1 nonsynonymous","R16N E76K Y121L",3
"lib1","SARS-CoV-2","GTTCAAAATGGGTACT",4,145.25,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V52T Y66L D98N R124I C158T Y178N",6
"lib1","SARS-CoV-2","GTTCAAACATTTAATG",2,64.82,8.63,-2.13,0.12,2.29,1.05,0.01,">1 nonsynonymous","Y119G F134M E186A",3
"lib1","SARS-CoV-2","GTTCAAACCAAAGGCT",13,195.28,10.08,-0.69,0.06,2.72,1.01,0,">1 nonsynonymous","T46Y P96K",2
"lib1","SARS-CoV-2","GTTCAAACCTCGAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90K G146W F185T",3
"lib1","SARS-CoV-2","GTTCAAAGCGAAACAA",3,0.85,NA,NA,NA,NA,NA,NA,"stop","K128* T170A",2
"lib1","SARS-CoV-2","GTTCAAATAACTCGCT",2,25.38,8.86,-1.91,0.11,2.77,1.14,0.01,">1 nonsynonymous","N58M N157A",2
"lib1","SARS-CoV-2","GTTCAAATCTTTATCA",5,52.76,10.98,0.22,0.06,2.9,1.06,0,"1 nonsynonymous","Y123F",1
"lib1","SARS-CoV-2","GTTCAAATTCCAAATA",8,40.16,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S45V I80Q T100N",3
"lib1","SARS-CoV-2","GTTCAAATTTCGGAAC",2,64.49,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","Y143M C158G",2
"lib1","SARS-CoV-2","GTTCAACAACCGCAAG",4,1.67,NA,NA,NA,NA,NA,NA,"stop","N4R F44Y F62P G86* I104L R127F P161I",7
"lib1","SARS-CoV-2","GTTCAACAATCTTGAT",8,64.73,10.67,-0.09,0.06,2.86,1.06,0,">1 nonsynonymous","L5R Y91F E141V",3
"lib1","SARS-CoV-2","GTTCAACCCAGTAGCA",4,44.48,10.33,-0.43,0.09,2.83,1,0,">1 nonsynonymous","D90G F160R",2
"lib1","SARS-CoV-2","GTTCAACCGCAAGAGT",7,20.6,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D97L V103R L122R T140R G174M",5
"lib1","SARS-CoV-2","GTTCAACCGGAATCTT",5,151.39,10.67,-0.1,0.04,2.92,1.04,0,">1 nonsynonymous","A22R I104L",2
"lib1","SARS-CoV-2","GTTCAACCTCCACATT",1,7.21,9.95,-0.82,0.15,2.34,1,0.01,">1 nonsynonymous","W106K G152S",2
"lib1","SARS-CoV-2","GTTCAACCTGTCCAGA",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L I88N P133R",3
"lib1","SARS-CoV-2","GTTCAACGACAAGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V11H Y50* N92E N120E",4
"lib1","SARS-CoV-2","GTTCAACGCTGGATAG",7,94.03,6.15,-4.61,0.71,1.5,1.17,0.02,">1 nonsynonymous","N58Y N157C",2
"lib1","SARS-CoV-2","GTTCAACGTACACAGC",2,68.47,10.73,-0.03,0.06,2.91,1.03,0,"1 nonsynonymous","N171I",1
"lib1","SARS-CoV-2","GTTCAACTTGCCTAAG",5,95.78,10.13,-0.63,0.09,2.75,1,0,">1 nonsynonymous","N40D D59I",2
"lib1","SARS-CoV-2","GTTCAACTTTAACGAG",3,58.93,9.57,-1.19,0.14,2.17,1.07,0.01,">1 nonsynonymous","S19M G196R",2
"lib1","SARS-CoV-2","GTTCAAGAGAGAATTT",1,12.72,6.41,-4.35,0.29,1.5,1.07,0.01,">1 nonsynonymous","I28L V153Y F156L Q168P",4
"lib1","SARS-CoV-2","GTTCAAGGTGAAGTAA",2,98.44,10.74,-0.02,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCAAGTACCTCTTA",2,72.45,10.05,-0.71,0.04,2.9,1,0,">1 nonsynonymous","L122Y G166S A190D",3
"lib1","SARS-CoV-2","GTTCAAGTATTCATCA",2,22.14,8.09,-2.68,0.36,1.5,1.09,0.04,">1 nonsynonymous","C49H P191S",2
"lib1","SARS-CoV-2","GTTCAATAATAAACAA",2,5.71,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","N1H E10L T15H N40Y N118F",5
"lib1","SARS-CoV-2","GTTCAATAGGATATTT",1,5.1,7.14,-3.63,1.37,2.36,1.17,0.06,">1 nonsynonymous","C6S Q84Y L95T S129W Q176L",5
"lib1","SARS-CoV-2","GTTCAATATATGTAGT",3,33.38,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6R G86L V173M",3
"lib1","SARS-CoV-2","GTTCAATATGTACTTC",2,59.85,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C158I T201I",2
"lib1","SARS-CoV-2","GTTCAATCCAGATAAC",2,55.81,8.23,-2.54,0.22,1.5,1.15,0.02,">1 nonsynonymous","E10N R16F K94M",3
"lib1","SARS-CoV-2","GTTCAATGTTGCACGC",3,46.07,10.22,-0.54,0.1,2.57,1,0,">1 nonsynonymous","N40R T55W D98Y K128T",4
"lib1","SARS-CoV-2","GTTCACAAATATACAT",7,99.44,10.87,0.11,0.08,2.9,1.07,0,"1 nonsynonymous","L122K",1
"lib1","SARS-CoV-2","GTTCACAACTCGAATT",1,11.54,6.89,-3.87,0.67,1.5,1.05,0.04,">1 nonsynonymous","D112T I142F G146M",3
"lib1","SARS-CoV-2","GTTCACAATAGTAGAT",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W I28M K48R",3
"lib1","SARS-CoV-2","GTTCACACAAAATATT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","L38P D98* V173C",3
"lib1","SARS-CoV-2","GTTCACACACCGACAA",5,37.9,10.73,-0.03,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCACACGCCCTAAA",2,52.66,8.63,-2.13,0.16,1.5,1.07,0.01,">1 nonsynonymous","S41R A67Y Q84L K128S",4
"lib1","SARS-CoV-2","GTTCACATAACCTTAT",7,198,10.07,-0.7,0.04,2.94,1,0,">1 nonsynonymous","I2S I142W",2
"lib1","SARS-CoV-2","GTTCACATTATAAAGC",2,11.3,9.68,-1.08,0.25,1.75,1.24,0.03,">1 nonsynonymous","K48N V103T",2
"lib1","SARS-CoV-2","GTTCACCAAAACACAT",8,9.29,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C6S F47Y D59Y V103M P133W",5
"lib1","SARS-CoV-2","GTTCACCAGAAGAGAG",3,39.63,10.8,0.03,0.06,2.85,1.07,0,">1 nonsynonymous","N130S T140N",2
"lib1","SARS-CoV-2","GTTCACCATTAATGCT",6,60.37,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C61S D112N Q144L F160E",4
"lib1","SARS-CoV-2","GTTCACCTAAAGTCAC",5,94.9,10.08,-0.68,0.07,2.27,1.01,0,">1 nonsynonymous","N64G F99Y S129D",3
"lib1","SARS-CoV-2","GTTCACCTCACCTCCT",2,1.31,NA,NA,NA,NA,NA,NA,"stop","C49S K94* L111F",3
"lib1","SARS-CoV-2","GTTCACGACAAATATG",4,46.99,10.61,-0.15,0.1,2.9,1.09,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","GTTCACTACTTCCCAC",4,73.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y123G Y175G",2
"lib1","SARS-CoV-2","GTTCACTAGATAATTG",1,0.81,NA,NA,NA,NA,NA,NA,"stop","I104L D112* K128T V173S Q176P",5
"lib1","SARS-CoV-2","GTTCACTCATTTGTGA",2,47.61,10.03,-0.73,0.13,1.92,1.01,0.01,">1 nonsynonymous","R25K T201L",2
"lib1","SARS-CoV-2","GTTCACTCTTGGATAG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","D90* N107G",2
"lib1","SARS-CoV-2","GTTCACTTACGTTCAC",7,53.73,7.69,-3.07,0.11,2.18,1.17,0,">1 nonsynonymous","C6G E10L E154Y",3
"lib1","SARS-CoV-2","GTTCAGAACCTGTTGA",6,13.08,7.38,-3.38,0.24,1.5,1,0.02,">1 nonsynonymous","T3Y N4K S41T K56T L60Q G86N I142L",7
"lib1","SARS-CoV-2","GTTCAGAAGAGTATCA",1,22.86,8.71,-2.05,0.15,2.92,1.04,0.01,">1 nonsynonymous","G152I F156L G174L P197S",4
"lib1","SARS-CoV-2","GTTCAGAAGCGAATGT",1,1.2,NA,NA,NA,NA,NA,NA,"stop","F70* D90I N110R R124A",4
"lib1","SARS-CoV-2","GTTCAGACCATAGAGT",1,21.51,9.91,-0.85,0.15,1.82,1.09,0.01,">1 nonsynonymous","L38K K48R K128V",3
"lib1","SARS-CoV-2","GTTCAGCAATTACTGT",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17V P149L P191Y",3
"lib1","SARS-CoV-2","GTTCAGCCGGGAAACT",5,23.81,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","T100N V115K C158E A190R",4
"lib1","SARS-CoV-2","GTTCAGCTGAAACTTC",2,5.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","E135V N157L",2
"lib1","SARS-CoV-2","GTTCAGCTTTACATTG",7,79.5,8.89,-1.88,0.06,2.65,1.05,0,">1 nonsynonymous","T85S G146V",2
"lib1","SARS-CoV-2","GTTCAGGATAAAACGG",4,113.52,10.65,-0.11,0.06,2.91,1.06,0,"1 nonsynonymous","K199D",1
"lib1","SARS-CoV-2","GTTCAGTATTAAGGTG",1,14.27,8.58,-2.18,0.18,2.58,1.17,0.01,">1 nonsynonymous","T15S Y119S Q168L",3
"lib1","SARS-CoV-2","GTTCAGTGAGATCATG",1,41.42,6,-4.76,2,3,1.15,0,">1 nonsynonymous","P7V T55A Y93I E135R S200Q",5
"lib1","SARS-CoV-2","GTTCAGTGGAGCTATG",2,208.57,10.37,-0.39,0.03,2.94,1.01,0,">1 nonsynonymous","K87N K132M",2
"lib1","SARS-CoV-2","GTTCAGTTGATTCGAA",3,24.58,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","A22T Y35N D68M N107G C158L",5
"lib1","SARS-CoV-2","GTTCATAAAACAGTAC",4,61.15,6.86,-3.91,0.37,1.51,1.29,0.02,"1 nonsynonymous","C150F",1
"lib1","SARS-CoV-2","GTTCATAACCCTAACC",5,77.01,10.92,0.16,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCATAACGAGTAAC",1,10.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3N S36R P54C Y123I F185I",5
"lib1","SARS-CoV-2","GTTCATAATCAAAAGT",3,26,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P54N R124T V180I",3
"lib1","SARS-CoV-2","GTTCATACATATGGCT",4,25.51,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N58Q A81Q D90K Y119S I138D A145T",6
"lib1","SARS-CoV-2","GTTCATACCCCACAGT",1,44.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11S W106L Y121I",3
"lib1","SARS-CoV-2","GTTCATAGGCACGATC",2,36.71,8.69,-2.08,0.11,2.97,1.07,0,"1 nonsynonymous","N157H",1
"lib1","SARS-CoV-2","GTTCATATAACCGGAC",8,131.92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36E N58S A81T Y91Q Y143F P169C",6
"lib1","SARS-CoV-2","GTTCATATAGTAGAGA",4,3.82,NA,NA,NA,NA,NA,NA,"stop","I28P L57* Y143W Q176G S184N L188S",6
"lib1","SARS-CoV-2","GTTCATATCATATATT",4,34.17,9.7,-1.07,0.16,1.8,1.06,0.01,">1 nonsynonymous","E10T E76Y",2
"lib1","SARS-CoV-2","GTTCATATCTAATACA",6,139.69,10.67,-0.09,0.1,2.76,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCATGATGACTTAA",2,7.86,6.2,-4.57,0.76,1.5,1.15,0.03,">1 nonsynonymous","A33K D98L C102V",3
"lib1","SARS-CoV-2","GTTCATGGTCAGCCAC",1,18.99,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V32S Y119V D137I S164F",4
"lib1","SARS-CoV-2","GTTCATGGTTACACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F62C P82F L95R Y123L E141* G166W",6
"lib1","SARS-CoV-2","GTTCATGTACATTATC",2,12.92,10.68,-0.09,0.13,2.81,1.07,0,">1 nonsynonymous","V32A P54S",2
"lib1","SARS-CoV-2","GTTCATTATTGTTTGC",5,59.93,10.68,-0.09,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCATTCGTTGACAT",9,146.83,8.03,-2.73,0.2,1.59,1.15,0.01,">1 nonsynonymous","T3M D90H Q163T Y175A",4
"lib1","SARS-CoV-2","GTTCATTCTTACCCAA",4,44.89,10.81,0.04,0.08,2.91,1.05,0,">1 nonsynonymous","S41T T85A T148K Q168A",4
"lib1","SARS-CoV-2","GTTCATTGAGTACGAA",4,138.26,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D90N G172M",2
"lib1","SARS-CoV-2","GTTCATTTCCTAGATC",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82V Q168C F185M",3
"lib1","SARS-CoV-2","GTTCCAAATAGCCTAA",1,40.16,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","D97K R127H S129F G146V P177S",5
"lib1","SARS-CoV-2","GTTCCAACACTGTAGT",10,405.45,9.59,-1.17,0.13,1.67,1.09,0.01,">1 nonsynonymous","S36V G51L L188V",3
"lib1","SARS-CoV-2","GTTCCAACACTTAAAA",5,130.85,10.79,0.03,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCCAACTAACATAA",2,21.06,10.24,-0.53,0.06,2.91,1,0,">1 nonsynonymous","F47Y K56M P191S",3
"lib1","SARS-CoV-2","GTTCCAACTACTCGAT",2,9.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A105L C195F",2
"lib1","SARS-CoV-2","GTTCCAAGATACAAAC",8,125.04,9.97,-0.8,0.12,2.06,1.07,0.01,">1 nonsynonymous","N58E L111G E141R",3
"lib1","SARS-CoV-2","GTTCCACAACACAAGG",15,6.83,NA,NA,NA,NA,NA,NA,"stop","S43M K114A T148* Q163D V181S T201I",6
"lib1","SARS-CoV-2","GTTCCACCAAATCAAG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","C49E G86S D98C S113* P149S",5
"lib1","SARS-CoV-2","GTTCCACCGAGTCCGC",2,17.43,10.79,0.02,0.11,2.9,1.08,0,">1 nonsynonymous","V37M T201Q",2
"lib1","SARS-CoV-2","GTTCCACTGGTATTCA",1,36.91,10.53,-0.23,0.06,2.99,1,0,">1 nonsynonymous","S45E Y91L V153E",3
"lib1","SARS-CoV-2","GTTCCAGTACAACATC",2,17.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N40F T85S L95D T201D",4
"lib1","SARS-CoV-2","GTTCCAGTGCTTATAT",1,18.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V32G L38S Y91D A192V",4
"lib1","SARS-CoV-2","GTTCCAGTGTGTTCTA",5,70.71,8.72,-2.04,0.11,1.73,1.09,0,">1 nonsynonymous","P96E G174W",2
"lib1","SARS-CoV-2","GTTCCAGTTTGGTAAT",9,121.79,10.81,0.04,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCCATAGATACCTG",1,1.76,NA,NA,NA,NA,NA,NA,"stop","Q84M I88V G146N T201*",4
"lib1","SARS-CoV-2","GTTCCATAGTAACAAG",1,17.86,6,-4.76,1.84,1.5,1.17,0.01,">1 nonsynonymous","S45F V77G G83V N157C Q168M V173N T201P",7
"lib1","SARS-CoV-2","GTTCCATGTCAATGTG",3,64.43,10.76,0,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCCCAAAACCGGGT",4,35.72,9.98,-0.79,0.06,2.91,1,0,"1 nonsynonymous","Q168E",1
"lib1","SARS-CoV-2","GTTCCCAAACTCCCAA",1,19.64,9.48,-1.29,0.09,2.88,1.06,0,">1 nonsynonymous","P54R N120T",2
"lib1","SARS-CoV-2","GTTCCCATGCTTGAAA",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44G S113I S129R F160H Y178N A190S",6
"lib1","SARS-CoV-2","GTTCCCCATTAAATTG",2,31.9,10.75,-0.02,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCCCCCATACAGAG",2,29.76,6,-4.76,2,3,1.11,0,">1 nonsynonymous","L131W P149L",2
"lib1","SARS-CoV-2","GTTCCCCGATGATAAG",9,105.42,10.69,-0.08,0.06,2.9,1.06,0,">1 nonsynonymous","I104F S164V",2
"lib1","SARS-CoV-2","GTTCCCGCTCTATCCA",9,5.87,6.6,-4.17,2,3,1.06,0.01,">1 nonsynonymous","D34T C49G T201L",3
"lib1","SARS-CoV-2","GTTCCCGTCCGTGTCC",1,62.07,9.67,-1.09,0.11,2.09,1.07,0,">1 nonsynonymous","C31A S129M C195F K199T",4
"lib1","SARS-CoV-2","GTTCCCGTGAGGTTAT",9,245.76,10.44,-0.32,0.03,2.88,1.02,0,">1 nonsynonymous","F12I F62M",2
"lib1","SARS-CoV-2","GTTCCCTACTAGTTTC",4,33.38,10.8,0.04,0.08,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTCCCTGAGATCTAA",2,73.19,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10V S113L Y119M T201L",4
"lib1","SARS-CoV-2","GTTCCGACCACGACCC",1,49.57,10.58,-0.19,0.11,2.86,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTTCCGACGATGAGTC",4,0.15,NA,NA,NA,NA,NA,NA,"stop","G86T G117*",2
"lib1","SARS-CoV-2","GTTCCGAGAGGAACTT",4,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L K94E D98Y V103F",4
"lib1","SARS-CoV-2","GTTCCGAGGGATAAAG",6,1.79,NA,NA,NA,NA,NA,NA,"stop","I28* C49H F156W S164L Y178*",5
"lib1","SARS-CoV-2","GTTCCGATAAATCCTA",3,1.19,NA,NA,NA,NA,NA,NA,"stop","N92L N118L S139A T201*",4
"lib1","SARS-CoV-2","GTTCCGCGTGAGCGAA",2,21.93,9.24,-1.52,0.17,1.97,1.09,0.01,">1 nonsynonymous","I2M Y121D Q168F",3
"lib1","SARS-CoV-2","GTTCCGTAACGGAGCC",6,48.08,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","I2T S19R L38V Y91T",4
"lib1","SARS-CoV-2","GTTCCGTTACTTGAAT",3,69.61,9.93,-0.83,0.11,2.56,1.02,0.01,">1 nonsynonymous","I2R V37F V71S",3
"lib1","SARS-CoV-2","GTTCCGTTGACGCCGA",1,8.74,9.87,-0.89,0.19,1.76,1.18,0.02,"1 nonsynonymous","Q84P",1
"lib1","SARS-CoV-2","GTTCCTAAGTCTCAAC",11,180.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y119W K132Q G146L",3
"lib1","SARS-CoV-2","GTTCCTAGGTAAACCA",14,214.16,10.01,-0.75,0.09,2.13,1.06,0,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","GTTCCTCAAACATCCA",2,26.06,10.19,-0.57,0.07,2.72,1,0,">1 nonsynonymous","L5S F62K L122F E135A",4
"lib1","SARS-CoV-2","GTTCCTCCGCCGTCGA",1,22.95,9.2,-1.56,0.22,1.7,1.12,0.03,">1 nonsynonymous","D112V G196W",2
"lib1","SARS-CoV-2","GTTCCTCGAAATGAAA",8,96.63,9.84,-0.93,0.1,2.53,1.07,0,">1 nonsynonymous","G9L G116K S184Q",3
"lib1","SARS-CoV-2","GTTCCTCGCGATAGAT",14,41.25,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A42V K56H V77E L95G T140L F156W Q163Y",7
"lib1","SARS-CoV-2","GTTCCTCGCGGAACTA",7,127.28,10.39,-0.38,0.04,2.95,1,0,">1 nonsynonymous","E141M P149L",2
"lib1","SARS-CoV-2","GTTCCTCTCAGGCACT",3,8.85,6,-4.76,2,1.5,1.2,0.08,">1 nonsynonymous","A42N F47I N64T P96Q F156C",5
"lib1","SARS-CoV-2","GTTCCTGAAGAAAGGT",6,59.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L95Q Y121K R136C Y175D",4
"lib1","SARS-CoV-2","GTTCCTGCTAACACAG",9,32.89,8.26,-2.5,0.43,1.5,1,0.08,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","GTTCCTTAGGGTCGAC",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150H L187Q",2
"lib1","SARS-CoV-2","GTTCCTTGAACCCACT",5,73.96,6,-4.76,2,3,1.25,0,">1 nonsynonymous","I2L V11R S113I Y119C",4
"lib1","SARS-CoV-2","GTTCCTTGAGTTAATG",2,96.59,9.82,-0.95,0.05,2.53,1.06,0,">1 nonsynonymous","A14V I142F",2
"lib1","SARS-CoV-2","GTTCGAAAATGAACAC",4,0,NA,NA,NA,NA,NA,NA,"stop","F17M P82F P96Y W106* L122R",5
"lib1","SARS-CoV-2","GTTCGAAATCATACTT",1,1.4,NA,NA,NA,NA,NA,NA,"stop","C6S N30* N120V Q163M",4
"lib1","SARS-CoV-2","GTTCGAACCCGGCACA",1,1.6,NA,NA,NA,NA,NA,NA,"stop","G9I P82W Y91S C102I R136* C158S V180S",7
"lib1","SARS-CoV-2","GTTCGAACTAACGTAA",12,50.62,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","N107H K132N C150L",3
"lib1","SARS-CoV-2","GTTCGAACTAAGCCGA",6,2.48,NA,NA,NA,NA,NA,NA,"stop","S43P K56* T100* P149T",4
"lib1","SARS-CoV-2","GTTCGAATAGAGGGTT",1,108.29,9.1,-1.66,0.16,1.69,1.11,0.01,">1 nonsynonymous","G9W W23S S129M",3
"lib1","SARS-CoV-2","GTTCGAATTCATTGCC",4,30.34,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","I2S I88L D98K V103I G116L",5
"lib1","SARS-CoV-2","GTTCGACAAATAACAG",2,18.51,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V20E V37L C49T C61F G117E",5
"lib1","SARS-CoV-2","GTTCGACCCCTATTGA",3,29.68,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","I80R",1
"lib1","SARS-CoV-2","GTTCGACGACGCAACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107R R127D",2
"lib1","SARS-CoV-2","GTTCGACGCACAGGCT",1,0.96,NA,NA,NA,NA,NA,NA,"stop","V11* A42E F99R S108T",4
"lib1","SARS-CoV-2","GTTCGACGGTGCGTTC",1,15.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23M",1
"lib1","SARS-CoV-2","GTTCGAGAGGAACAAA",1,18.67,9.59,-1.17,0.2,1.5,1.06,0.02,">1 nonsynonymous","G51Y D97F L122Y",3
"lib1","SARS-CoV-2","GTTCGAGCAAAAGTCA",4,29.91,10.07,-0.69,0.1,2.23,1.03,0.01,">1 nonsynonymous","W106R V115K L122M K132S",4
"lib1","SARS-CoV-2","GTTCGAGTCTCTTAGT",1,20.29,9.47,-1.29,0.32,1.5,1,0.06,">1 nonsynonymous","G51T T100D",2
"lib1","SARS-CoV-2","GTTCGATATCGAAAAA",2,38.31,10.29,-0.47,0.07,2.9,1.06,0,">1 nonsynonymous","N4Y D59Y Q84S",3
"lib1","SARS-CoV-2","GTTCGATGTGAATATT",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W G83R A89P",3
"lib1","SARS-CoV-2","GTTCGATTGCAATGAA",3,18.52,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","S113V R127D",2
"lib1","SARS-CoV-2","GTTCGCAAGATACGCG",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102G V180E",2
"lib1","SARS-CoV-2","GTTCGCACGCCAAGCC",2,15.5,9.8,-0.96,0.38,1.5,1.03,0.07,">1 nonsynonymous","D34L G83V W106M N151K P197N",5
"lib1","SARS-CoV-2","GTTCGCATATGGGGAA",3,34.08,10.07,-0.69,0.14,2.33,1.01,0.01,">1 nonsynonymous","W106S V173R",2
"lib1","SARS-CoV-2","GTTCGCCGATACGCTG",1,49.01,10.23,-0.53,0.12,2.72,1.03,0.01,"1 nonsynonymous","G51E",1
"lib1","SARS-CoV-2","GTTCGCGCAAGTATAT",2,23.04,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","I104N Y123I",2
"lib1","SARS-CoV-2","GTTCGCGCAGTTATCA",6,101.24,10.82,0.05,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCGCGTTCTACATA",6,43.61,10.75,-0.02,0.07,2.86,1.09,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","GTTCGCTAAAATCGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R G86K P96S L111C Y123G P149R",6
"lib1","SARS-CoV-2","GTTCGCTTCAGTCAAC",3,21.8,6.14,-4.62,1.07,1.5,1.2,0.03,">1 nonsynonymous","K56H R78C P82K D97R S113A N120R G152Y",7
"lib1","SARS-CoV-2","GTTCGGACTAATTCAA",1,36.72,10.38,-0.38,0.07,2.81,1.09,0,">1 nonsynonymous","A33V A81G",2
"lib1","SARS-CoV-2","GTTCGGAGATTAGATT",9,338.96,9.93,-0.83,0.07,2.11,1.05,0,">1 nonsynonymous","C49L S184T",2
"lib1","SARS-CoV-2","GTTCGGAGCCCACTAA",2,6.7,6,-4.76,2,1.5,1.23,0.07,">1 nonsynonymous","F12Y N92K I104S",3
"lib1","SARS-CoV-2","GTTCGGAGTATTCGAT",6,219.84,6.06,-4.71,0.6,1.5,1.14,0.01,">1 nonsynonymous","N157K T170L",2
"lib1","SARS-CoV-2","GTTCGGCAATGAATGT",3,139.7,10.66,-0.11,0.04,2.95,1.01,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","GTTCGGTATAAGGGAG",4,67.86,8.87,-1.9,0.11,2.2,1.07,0.01,">1 nonsynonymous","N1L D90Q Y123W G166R",4
"lib1","SARS-CoV-2","GTTCGGTTGACACCAT",1,13.73,10.1,-0.66,0.17,2.31,1.02,0.02,">1 nonsynonymous","I104T E141R",2
"lib1","SARS-CoV-2","GTTCGTACAAATTGGA",12,250.64,10.71,-0.05,0.05,2.9,1.07,0,">1 nonsynonymous","S45Q G51R L122S",3
"lib1","SARS-CoV-2","GTTCGTAGCACTGTCT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","P7* D97Q N107Y T148V",4
"lib1","SARS-CoV-2","GTTCGTAGGAGCTCAA",3,7.43,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N13C K48E V65K E154S",4
"lib1","SARS-CoV-2","GTTCGTCACAAAGCGA",3,32.83,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37K Y91P Y123S S129I Q168I P197S",6
"lib1","SARS-CoV-2","GTTCGTCCAACCGTAG",4,39.79,10.12,-0.65,0.08,2.47,1.02,0,">1 nonsynonymous","D90L S129A S164L P197H",4
"lib1","SARS-CoV-2","GTTCGTCTTACATGTT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","N58A L111*",2
"lib1","SARS-CoV-2","GTTCGTTAAATATAAG",2,1.79,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","GTTCGTTGAAACATAG",3,45.45,8.15,-2.61,0.18,1.73,1.12,0.02,">1 nonsynonymous","S113Y S184L",2
"lib1","SARS-CoV-2","GTTCTAAAACAGTTAT",4,47.46,10.76,0,0.08,2.93,1.04,0,">1 nonsynonymous","T85L L122S",2
"lib1","SARS-CoV-2","GTTCTAAAATCAGTAG",1,24.49,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","D137Q G155N",2
"lib1","SARS-CoV-2","GTTCTAAAATCTGCCG",4,45.04,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R73T I88N L95C D97N E141P",5
"lib1","SARS-CoV-2","GTTCTAACAAACGAAA",1,10.72,8.77,-1.99,0.27,1.5,1.01,0.03,">1 nonsynonymous","C49Y Q144D",2
"lib1","SARS-CoV-2","GTTCTAACAAAGTCTA",3,7.13,6.99,-3.77,0.37,1.5,1,0.03,">1 nonsynonymous","W23S S45R G155H",3
"lib1","SARS-CoV-2","GTTCTAACAATAAACG",6,62.01,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86V Q144R",2
"lib1","SARS-CoV-2","GTTCTAACACCCGATC",5,130.85,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9M Y50A K94E H189E",4
"lib1","SARS-CoV-2","GTTCTAACCAACACGT",7,2.01,NA,NA,NA,NA,NA,NA,"stop","F17L T85* P96M G146E F160K",5
"lib1","SARS-CoV-2","GTTCTAACCTCCCTAT",7,19.38,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","V11F T15L Q84N A105S C158R",5
"lib1","SARS-CoV-2","GTTCTAACTGCCAAGT",3,5.91,10.16,-0.6,0.22,2.42,1.02,0.02,">1 nonsynonymous","T15H E135K",2
"lib1","SARS-CoV-2","GTTCTAAGTAAGTATT",2,1.63,NA,NA,NA,NA,NA,NA,"stop","E10* V37L V103F",3
"lib1","SARS-CoV-2","GTTCTAATCCTCGCCA",7,36.99,8.93,-1.83,0.34,1.5,1,0.04,">1 nonsynonymous","V11H R27K Y35N T46N G196K",5
"lib1","SARS-CoV-2","GTTCTACATACGATAC",3,7.4,6,-4.76,2,3,1,0,">1 nonsynonymous","A33F Y50A D97A N107H P149H T201G",6
"lib1","SARS-CoV-2","GTTCTACCGAACTAGT",3,16.95,10.28,-0.48,0.14,2.84,1,0.02,">1 nonsynonymous","N4R N13A V37Q",3
"lib1","SARS-CoV-2","GTTCTACCGATATTAC",9,79.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68M A89Q S113C",3
"lib1","SARS-CoV-2","GTTCTACCGCCTCCTA",1,30.02,6,-4.76,2,2.71,1.19,0,">1 nonsynonymous","S139V L162R Q176T V182R",4
"lib1","SARS-CoV-2","GTTCTACTATCTCAAA",7,11.5,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","R27I A33T S45V D97T N120V A145T V182H",7
"lib1","SARS-CoV-2","GTTCTACTCACTCCGG",5,37.42,10.73,-0.04,0.04,2.98,1,0,"1 nonsynonymous","F44Y",1
"lib1","SARS-CoV-2","GTTCTACTGGGTACAA",5,47.43,6,-4.76,1.27,1.5,1.11,0,">1 nonsynonymous","N40L F99D I142Y P197Q",4
"lib1","SARS-CoV-2","GTTCTAGAAATAATAC",5,2.46,NA,NA,NA,NA,NA,NA,"stop","A42N T63A L131* P177K",4
"lib1","SARS-CoV-2","GTTCTAGTAAATATTT",1,2.7,NA,NA,NA,NA,NA,NA,"stop","Y21Q S45L C49Y K128* G172R K199M",6
"lib1","SARS-CoV-2","GTTCTATACAAACAAG",3,45.28,9.71,-1.05,0.12,2.11,1.07,0.01,">1 nonsynonymous","S19A K48V G152K",3
"lib1","SARS-CoV-2","GTTCTATAGAAGGTAT",9,32.57,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","E10K F70I V77E S184E",4
"lib1","SARS-CoV-2","GTTCTATGAAGCTGAC",4,51.58,8.61,-2.15,0.16,2.06,1.12,0.01,">1 nonsynonymous","G83F S113F Y123R P169Q",4
"lib1","SARS-CoV-2","GTTCTATGCTTCACTG",3,96.93,9.88,-0.88,0.09,2.27,1.04,0,"1 nonsynonymous","V11P",1
"lib1","SARS-CoV-2","GTTCTATGTAAAAAAT",2,20.01,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","G86F F99M",2
"lib1","SARS-CoV-2","GTTCTCAAGTACATAC",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113L G152I N171K",3
"lib1","SARS-CoV-2","GTTCTCACTGACCCGG",10,12.35,NA,NA,NA,NA,NA,NA,"stop","P7L A33* F62H L122V G172Q",5
"lib1","SARS-CoV-2","GTTCTCATTCCAAAAT",3,65.96,10.73,-0.04,0.06,2.88,1.08,0,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","GTTCTCCCCAACTGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* A89K Y143K",3
"lib1","SARS-CoV-2","GTTCTCCCCTTACCTC",7,1.36,NA,NA,NA,NA,NA,NA,"stop","P82L D112*",2
"lib1","SARS-CoV-2","GTTCTCGACCAATACG",4,27.63,6.1,-4.66,0.69,1.5,1.11,0.01,">1 nonsynonymous","K56S G146T C158P",3
"lib1","SARS-CoV-2","GTTCTCGAGTCTAAAG",10,84.04,10.74,-0.03,0.07,2.87,1.06,0,">1 nonsynonymous","S43T N64Y N110L P197V",4
"lib1","SARS-CoV-2","GTTCTCGCACACAAGT",2,54.24,10.33,-0.43,0.07,2.97,1,0,">1 nonsynonymous","Y123R S129V",2
"lib1","SARS-CoV-2","GTTCTCGGACCCATAA",8,92.43,9.59,-1.17,0.12,1.83,1.11,0.01,">1 nonsynonymous","E10W K48M G155K",3
"lib1","SARS-CoV-2","GTTCTCGTAAGCGCAA",4,38.26,6,-4.76,1.87,1.5,1.13,0.02,">1 nonsynonymous","C6M F99L",2
"lib1","SARS-CoV-2","GTTCTCTAGGTCTTAA",20,361.94,10.8,0.03,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCTCTTCTTCCAGT",1,27.22,8.75,-2.01,0.29,1.62,1.17,0.03,">1 nonsynonymous","N4H C158S",2
"lib1","SARS-CoV-2","GTTCTGAACAACACAG",7,63.03,9.64,-1.12,0.17,1.73,1.16,0.01,">1 nonsynonymous","S45K F160N V180L",3
"lib1","SARS-CoV-2","GTTCTGAGCCTGATGG",1,13.05,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A18K A67D A105M Y143V C158Y",5
"lib1","SARS-CoV-2","GTTCTGCAATGGGTCA",2,24.64,8.69,-2.08,0.35,1.5,1,0.04,">1 nonsynonymous","I28K N40S L60T",3
"lib1","SARS-CoV-2","GTTCTGCATCGCAGCC",3,0.32,NA,NA,NA,NA,NA,NA,"stop","P54K G116* P133R",3
"lib1","SARS-CoV-2","GTTCTGCCGGCCCGAA",1,25.31,10.72,-0.05,0.04,2.92,1.05,0,">1 nonsynonymous","K114M K198Q",2
"lib1","SARS-CoV-2","GTTCTGCGGACACGAA",4,47.7,10.75,-0.01,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCTGGGCGGACACA",2,26.69,10.02,-0.75,0.08,2.79,1.07,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","GTTCTGTAAGCCAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F12Y G152*",2
"lib1","SARS-CoV-2","GTTCTGTAATCATACG",2,41.62,10.78,0.01,0.04,2.96,1,0,">1 nonsynonymous","V37E S45T",2
"lib1","SARS-CoV-2","GTTCTGTCGCAGATTG",1,9.09,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12V G86R F99T",3
"lib1","SARS-CoV-2","GTTCTTAATTACCGTT",1,2.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112P",1
"lib1","SARS-CoV-2","GTTCTTACAGCATCGA",9,8.34,NA,NA,NA,NA,NA,NA,"stop","Y35* I88K Q144L K198L",4
"lib1","SARS-CoV-2","GTTCTTACTTAAAAAC",2,16.96,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N1Y A105V Y119A P149N T170N",5
"lib1","SARS-CoV-2","GTTCTTACTTAGCATT",7,85.45,9.88,-0.89,0.09,2.21,1.07,0,">1 nonsynonymous","D90F D98L",2
"lib1","SARS-CoV-2","GTTCTTAGAATCATAT",4,1.14,NA,NA,NA,NA,NA,NA,"stop","C61K G83* T140N",3
"lib1","SARS-CoV-2","GTTCTTCGAAAAATTC",1,71.22,10.76,0,0.05,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTCTTGACCATATAA",1,5.41,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","F70L G146K C158A",3
"lib1","SARS-CoV-2","GTTGAAAAGATACAGA",8,176.46,8.58,-2.19,0.12,2.96,1.03,0.01,"1 nonsynonymous","Q168K",1
"lib1","SARS-CoV-2","GTTGAAAAGGATTTAC",11,48.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11C L95R",2
"lib1","SARS-CoV-2","GTTGAAAAGGTCCCAG",3,20.2,9.93,-0.83,0.12,2.36,1.01,0.01,">1 nonsynonymous","A14F K199Y",2
"lib1","SARS-CoV-2","GTTGAAAATGTGTTAC",2,66.38,10.72,-0.05,0.09,2.96,1.03,0,">1 nonsynonymous","D59T N120K",2
"lib1","SARS-CoV-2","GTTGAAACGCTAACAT",2,83.98,6.46,-4.3,0.53,1.5,1.19,0.02,">1 nonsynonymous","S19Q D90V",2
"lib1","SARS-CoV-2","GTTGAAACTCAAAGAT",3,27.81,6.24,-4.53,0.91,1.5,1.24,0.04,"1 nonsynonymous","D68W",1
"lib1","SARS-CoV-2","GTTGAAAGAAGTTATA",3,174.66,8.54,-2.22,0.13,2.51,1.08,0.01,"1 nonsynonymous","Q176V",1
"lib1","SARS-CoV-2","GTTGAAAGCTAATTAA",2,64.14,8.5,-2.26,0.13,2.1,1.19,0.01,">1 nonsynonymous","Y35L A67S S113C",3
"lib1","SARS-CoV-2","GTTGAAAGCTTTCTGA",1,2.14,NA,NA,NA,NA,NA,NA,"stop","Y35I D98N K128N G155*",4
"lib1","SARS-CoV-2","GTTGAAATATGTGTCC",6,0.16,NA,NA,NA,NA,NA,NA,"stop","P7S R27E T46Q K132E G174R V180*",6
"lib1","SARS-CoV-2","GTTGAACAAACACCGG",1,25.71,10.64,-0.12,0.03,2.89,1.04,0,"1 nonsynonymous","A18Y",1
"lib1","SARS-CoV-2","GTTGAACATAAACTCC",3,6.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68M R78M L125W E186D",4
"lib1","SARS-CoV-2","GTTGAACCAAACGAGT",5,85.19,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N24L G86I L95I L125H N157A",5
"lib1","SARS-CoV-2","GTTGAACGATTAAAAT",4,110.15,10.58,-0.19,0.04,2.97,1,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","GTTGAAGACGGCGATA",10,230.52,9.38,-1.38,0.07,2.8,1.1,0,">1 nonsynonymous","T3V D97S F126Y",3
"lib1","SARS-CoV-2","GTTGAAGCCTAGATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y P149F G172W",3
"lib1","SARS-CoV-2","GTTGAAGGAATAAGTT",3,52.25,9.51,-1.25,0.11,1.68,1.11,0,">1 nonsynonymous","L60T D98S Y178L",3
"lib1","SARS-CoV-2","GTTGAAGGAATGGAGT",4,32.8,8.89,-1.87,0.17,2.05,1.05,0.01,">1 nonsynonymous","S45C L57S",2
"lib1","SARS-CoV-2","GTTGAAGGTACGCTGC",8,206.43,10.53,-0.24,0.03,2.93,1.03,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","GTTGAATAAGCTCCAC",4,9.56,6,-4.76,2,3,1.12,0,">1 nonsynonymous","N4R T15L D90P",3
"lib1","SARS-CoV-2","GTTGAATAATACAAAA",9,43.55,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G51E D98P E135M",3
"lib1","SARS-CoV-2","GTTGAATAGCCTAATT",2,28.32,9.77,-0.99,0.12,2.3,1.1,0.01,">1 nonsynonymous","S36M L131C",2
"lib1","SARS-CoV-2","GTTGAATATTAAACAA",5,10.73,6.44,-4.33,0.84,1.5,1.35,0.07,">1 nonsynonymous","D34L K94W C102M Q144S V182L",5
"lib1","SARS-CoV-2","GTTGAATCTAAGTCAC",5,28.7,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N13F A42G F99L E135W T201N",5
"lib1","SARS-CoV-2","GTTGAATGCATCTTAC",7,73.99,6.74,-4.02,0.35,1.5,1.17,0.02,">1 nonsynonymous","S69M N107V",2
"lib1","SARS-CoV-2","GTTGAATTACCAGAAA",4,106.17,9.66,-1.1,0.04,2.88,1.05,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","GTTGAATTCAGTGGTT",9,73.25,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I28V Y35L C61P A89N Y159C",5
"lib1","SARS-CoV-2","GTTGAATTTGACTTTA",2,10.14,6,-4.76,2,3,1.15,0.05,">1 nonsynonymous","Y119T R124H",2
"lib1","SARS-CoV-2","GTTGACACTGGCACCT",3,28.76,6,-4.76,2,1.53,1.15,0.01,">1 nonsynonymous","P96S Q168K R179Y",3
"lib1","SARS-CoV-2","GTTGACAGGAACAATA",6,178.43,6.23,-4.54,0.79,1.5,1.21,0.03,">1 nonsynonymous","F8L P82S P133S",3
"lib1","SARS-CoV-2","GTTGACAGTCTCTCGC",4,62.22,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N58Y P96C Y159C",3
"lib1","SARS-CoV-2","GTTGACATATACTCTT",2,45.83,10.68,-0.08,0.04,2.87,1.11,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","GTTGACATCCACGTCA",4,19.72,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R73P V181K",2
"lib1","SARS-CoV-2","GTTGACCAAATGGCCT",2,50.91,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9M Y35H Y50S",3
"lib1","SARS-CoV-2","GTTGACCATGGAGGTG",3,61.22,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D59I D90N Y165S",3
"lib1","SARS-CoV-2","GTTGACCCAAGCAAAT",5,79.51,10.79,0.02,0.07,2.84,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGACCCGCACTCGT",4,142.66,6,-4.76,1.5,1.5,1.15,0.01,">1 nonsynonymous","V11S S45Q S53F G83F K94T Y119D Q163P",7
"lib1","SARS-CoV-2","GTTGACCTCCAAACAT",1,17.15,10.6,-0.17,0.1,2.88,1.02,0.01,"1 nonsynonymous","S19P",1
"lib1","SARS-CoV-2","GTTGACCTTCTTCGTG",1,41.58,10.75,-0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGACCTTTAAAGGC",1,16.27,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C49W G101C A105I Y121P",4
"lib1","SARS-CoV-2","GTTGACGAACCCGTGA",3,2.8,NA,NA,NA,NA,NA,NA,"stop","D59* F99S Y119L Y159P",4
"lib1","SARS-CoV-2","GTTGACGATCTGGACG",4,49.33,8.15,-2.62,0.25,1.5,1.09,0.02,">1 nonsynonymous","Y91I Y123G",2
"lib1","SARS-CoV-2","GTTGACGCAAAAATTG",1,45.44,6.07,-4.69,0.98,1.5,1.19,0.02,">1 nonsynonymous","T63N Y93T",2
"lib1","SARS-CoV-2","GTTGACGCGTGAAATG",2,49.58,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9S D34G V77W W106L",4
"lib1","SARS-CoV-2","GTTGACGGAATTGTAA",6,22.84,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","E10T D90R V103P",3
"lib1","SARS-CoV-2","GTTGACTAATTGACTG",9,89.69,9.86,-0.9,0.09,1.98,1.04,0,">1 nonsynonymous","L5S L38R",2
"lib1","SARS-CoV-2","GTTGACTTGTGGACCG",5,38.48,8.72,-2.04,0.14,1.53,1.13,0.01,">1 nonsynonymous","I28T S45Y",2
"lib1","SARS-CoV-2","GTTGAGAAACCTGTCG",9,91.62,10.23,-0.54,0.06,2.76,1.04,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","GTTGAGAAGAGTGGTA",13,148.76,9.96,-0.81,0.1,1.99,1.05,0,">1 nonsynonymous","L5A G51P",2
"lib1","SARS-CoV-2","GTTGAGACATTATTCC",2,15.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2R V103G",2
"lib1","SARS-CoV-2","GTTGAGACCTAAATTA",11,97.42,10.85,0.08,0.06,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGAGAGTCAGGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* Y66F P96T A105W",4
"lib1","SARS-CoV-2","GTTGAGATAATCACAT",6,70.51,10.7,-0.06,0.03,2.98,1.01,0,">1 nonsynonymous","S41C F62H L122M",3
"lib1","SARS-CoV-2","GTTGAGCGAAAAAAGG",1,5.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V L131F P149R",3
"lib1","SARS-CoV-2","GTTGAGCTCGGATTAG",9,3.92,NA,NA,NA,NA,NA,NA,"stop","F44* L95P N118V E154Y",4
"lib1","SARS-CoV-2","GTTGAGGGGTTTCTTG",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R N13F A33S T100V K132I I142Y",6
"lib1","SARS-CoV-2","GTTGAGGTCTATCAAA",3,24.9,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","W23L C49L Q168I",3
"lib1","SARS-CoV-2","GTTGAGGTTAACGACT",3,26.2,10.23,-0.53,0.14,2.52,1.05,0.01,">1 nonsynonymous","A81T N109K",2
"lib1","SARS-CoV-2","GTTGAGTATGGCTTTC",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L S129M",2
"lib1","SARS-CoV-2","GTTGATAACTAGTTCG",9,49.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2Y S19G I28M Q84R Y119E P133K A190V",7
"lib1","SARS-CoV-2","GTTGATAATACTTGAA",5,95.54,10.02,-0.75,0.08,2.6,1.03,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","GTTGATAATATAATCG",1,1.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145I",1
"lib1","SARS-CoV-2","GTTGATAATCACCTCC",5,61.92,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23R S36F F44T G146R",4
"lib1","SARS-CoV-2","GTTGATACGAACAAGG",2,12.83,6.18,-4.58,0.41,3,1.27,0.01,"1 nonsynonymous","C150H",1
"lib1","SARS-CoV-2","GTTGATAGTACAGGAT",2,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G P82L D90A G101D N120Q S147I",6
"lib1","SARS-CoV-2","GTTGATAGTTCTTGAA",1,7.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16Y C61V F99C",3
"lib1","SARS-CoV-2","GTTGATATAGTACAAC",1,14.73,10.93,0.17,0.1,2.99,1,0,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","GTTGATATCATGATTC",3,64.46,9.66,-1.1,0.15,1.83,1.09,0.01,">1 nonsynonymous","N58L K94S",2
"lib1","SARS-CoV-2","GTTGATATGCACACTG",4,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Q N92F L125R F185V K199F",5
"lib1","SARS-CoV-2","GTTGATATTGACAGTT",3,168.74,9.33,-1.43,0.04,2.91,1.08,0,">1 nonsynonymous","G51N Y119P",2
"lib1","SARS-CoV-2","GTTGATCACATGGTAT",7,70.57,6.05,-4.72,0.75,1.5,1.18,0.02,">1 nonsynonymous","F70G Q163G K198G",3
"lib1","SARS-CoV-2","GTTGATCCATCATTCC",2,15.98,10.7,-0.06,0.08,2.87,1.08,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","GTTGATCTATCAGTCG",6,42.35,6,-4.76,1.51,1.5,1.17,0.02,">1 nonsynonymous","S43L V52G K94S W106V P149K",5
"lib1","SARS-CoV-2","GTTGATCTTAGTTGTA",3,1.36,NA,NA,NA,NA,NA,NA,"stop","D90N L125* A145R G155V S184N",5
"lib1","SARS-CoV-2","GTTGATGAAGAATATC",1,6.2,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N4K S29M T63I S69A L95G R179G",6
"lib1","SARS-CoV-2","GTTGATGACATGAATC",2,35.52,6.22,-4.54,0.62,1.5,1.14,0.02,">1 nonsynonymous","G51V G86C",2
"lib1","SARS-CoV-2","GTTGATGATTCGCAGG",1,21.72,6.05,-4.71,0.61,1.5,1.11,0.01,">1 nonsynonymous","G74T K94S G174I",3
"lib1","SARS-CoV-2","GTTGATGCATGCTATA",6,101.21,10.27,-0.49,0.05,2.81,1,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","GTTGATGTTCGCCAAG",1,68.83,9.3,-1.47,0.04,2.87,1.07,0,">1 nonsynonymous","Q176A S200G",2
"lib1","SARS-CoV-2","GTTGATTAGAGAAACA",4,2.11,NA,NA,NA,NA,NA,NA,"stop","C49M K56*",2
"lib1","SARS-CoV-2","GTTGATTATCCGTGTC",10,187.06,10.75,-0.01,0.05,2.92,1.05,0,"1 nonsynonymous","P54E",1
"lib1","SARS-CoV-2","GTTGATTCTAACATAT",3,56.68,10.52,-0.25,0.03,2.94,1.01,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","GTTGATTGCGATCCCT",5,49.47,10.72,-0.04,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGATTTACTTTACA",3,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I D90H V103R G155T",4
"lib1","SARS-CoV-2","GTTGATTTAGTGTGAT",4,37.44,10.43,-0.33,0.08,2.81,1.03,0,"1 nonsynonymous","A42L",1
"lib1","SARS-CoV-2","GTTGCAAACCGTGATC",4,25.5,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","E10K Y50K G83C N151Y",4
"lib1","SARS-CoV-2","GTTGCAAATGCATATT",2,20.94,6,-4.76,2,1.5,1.09,0.01,"1 nonsynonymous","V20W",1
"lib1","SARS-CoV-2","GTTGCAAATTGAGAAG",2,21.73,10.95,0.19,0.08,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGCAACATTTTTAC",3,0.56,NA,NA,NA,NA,NA,NA,"stop","Y35H P54I K87N F99T S108T Y123A L131* S200V",8
"lib1","SARS-CoV-2","GTTGCAATAGACAGTT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","C49P A105* Q176M",3
"lib1","SARS-CoV-2","GTTGCACAAAGTAGGG",5,17.41,7.81,-2.95,0.27,1.54,1.11,0.02,">1 nonsynonymous","F70L T170S",2
"lib1","SARS-CoV-2","GTTGCACATGACTATA",2,92.63,10.54,-0.22,0.06,2.86,1,0,">1 nonsynonymous","T63S A81K",2
"lib1","SARS-CoV-2","GTTGCACGCAATCATA",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G F47V C61T A67Y K128M",5
"lib1","SARS-CoV-2","GTTGCACGTTGCATAT",1,74.46,10.26,-0.5,0.06,2.73,1,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","GTTGCACTCTGCTAAG",1,25.25,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I88E D97G E154N",3
"lib1","SARS-CoV-2","GTTGCACTTGCGATGC",4,132.37,10.36,-0.41,0.04,2.91,1.03,0,">1 nonsynonymous","E10H K87N Q163F",3
"lib1","SARS-CoV-2","GTTGCAGCCCAAATGA",1,14,9.8,-0.96,0.05,2.88,1,0,">1 nonsynonymous","N40F G174L",2
"lib1","SARS-CoV-2","GTTGCAGCGGCCGATG",2,43.87,10.54,-0.22,0.08,2.88,1,0,">1 nonsynonymous","V11M R27K",2
"lib1","SARS-CoV-2","GTTGCAGTAGCGAATA",5,135.16,10.58,-0.19,0.05,2.95,1,0,">1 nonsynonymous","D90L T201V",2
"lib1","SARS-CoV-2","GTTGCAGTCTCGCATG",2,68.1,10.3,-0.47,0.04,2.71,1.03,0,">1 nonsynonymous","L5I P133T",2
"lib1","SARS-CoV-2","GTTGCATAACGCCATT",5,54.4,9.73,-1.03,0.11,1.97,1.08,0.01,">1 nonsynonymous","C6L Y39P K198L",3
"lib1","SARS-CoV-2","GTTGCATCACCGCCGA",2,30.59,9.99,-0.77,0.05,2.82,1.06,0,">1 nonsynonymous","P54F Y121M F160Y H189I",4
"lib1","SARS-CoV-2","GTTGCATGATCTCATA",3,79.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50V A190W",2
"lib1","SARS-CoV-2","GTTGCATTAGCTACAT",7,10.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S69G I88V K128L Y143L",4
"lib1","SARS-CoV-2","GTTGCATTTAAATCGG",1,14.81,9.11,-1.66,0.09,2.78,1.12,0,">1 nonsynonymous","Q79M Y119R",2
"lib1","SARS-CoV-2","GTTGCATTTGTCAGGC",8,106.94,8.02,-2.74,0.27,1.5,1.15,0.02,">1 nonsynonymous","F8L P82E",2
"lib1","SARS-CoV-2","GTTGCCATCGCTATTA",1,8.45,9.21,-1.56,0.39,1.5,1.01,0.06,">1 nonsynonymous","G9W T15W P133S Q168R",4
"lib1","SARS-CoV-2","GTTGCCATTGCTAGCC",7,41.23,7.77,-3,0.38,1.5,1.07,0.07,"1 nonsynonymous","I80T",1
"lib1","SARS-CoV-2","GTTGCCCACGACTTTC",1,22.89,7.81,-2.95,0.33,1.5,1.04,0.05,">1 nonsynonymous","P54H D90M D97L P161A S200N",5
"lib1","SARS-CoV-2","GTTGCCCGTAGAACAT",1,6.93,9.02,-1.75,0.21,1.96,1,0.01,"1 nonsynonymous","V77W",1
"lib1","SARS-CoV-2","GTTGCCCTAGCACCCT",6,58.36,6.84,-3.93,0.51,1.5,1.24,0.04,"1 nonsynonymous","C102S",1
"lib1","SARS-CoV-2","GTTGCCGAGAAAGTTT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","A42S L60H S129T E135* A190H",5
"lib1","SARS-CoV-2","GTTGCCGATCCAGGCT",7,107.34,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","N64V Y121K G172N",3
"lib1","SARS-CoV-2","GTTGCCGCACAAAGTG",2,36.13,7.1,-3.67,0.43,1.5,1,0.04,">1 nonsynonymous","E10T A42P R136S Y175S",4
"lib1","SARS-CoV-2","GTTGCCTCACTGTATT",3,86.57,9.92,-0.84,0.13,2.19,1.04,0.01,">1 nonsynonymous","C6F K26V S36Y",3
"lib1","SARS-CoV-2","GTTGCGAACCAGACTT",10,87.59,8.64,-2.12,0.3,1.5,1,0.04,"1 nonsynonymous","A89W",1
"lib1","SARS-CoV-2","GTTGCGAATTAACCAC",3,24.56,10.5,-0.26,0.06,2.91,1.01,0,"1 nonsynonymous","F62D",1
"lib1","SARS-CoV-2","GTTGCGACTAATCTTA",2,40.83,8.78,-1.99,0.31,1.5,1,0.03,">1 nonsynonymous","K56G K94P",2
"lib1","SARS-CoV-2","GTTGCGAGAAAGTGGG",2,87.29,10.52,-0.25,0.05,2.87,1.03,0,">1 nonsynonymous","N24K K48S E141V",3
"lib1","SARS-CoV-2","GTTGCGAGCGTTTAAA",2,13.53,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","F44R D68E G83N",3
"lib1","SARS-CoV-2","GTTGCGCAAATAGGTG",7,35.68,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","V37T V77Q V103R R136E",4
"lib1","SARS-CoV-2","GTTGCGCAAGCCAGCA",3,61,10.56,-0.21,0.06,2.9,1.01,0,">1 nonsynonymous","T55K V71L L122W",3
"lib1","SARS-CoV-2","GTTGCGGTATTCTACT",11,47.12,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A33P G86Y V103S P133M K199T",5
"lib1","SARS-CoV-2","GTTGCGTAAGTCGATT",3,14.61,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A22M L57F V77M I80R W106L",5
"lib1","SARS-CoV-2","GTTGCTAAAAAAAACA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","G9I T85* V180N",3
"lib1","SARS-CoV-2","GTTGCTCGAGGGATGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S29* N130L G166R",3
"lib1","SARS-CoV-2","GTTGCTCTAGACTTTA",1,12.78,6.49,-4.27,0.81,1.5,1.08,0.07,">1 nonsynonymous","L5Q S19K V37Q G83D T85G D90P",6
"lib1","SARS-CoV-2","GTTGCTCTGCGTAAAT",14,88.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y50N K94T L95P V103R",4
"lib1","SARS-CoV-2","GTTGCTGATCCTCCAG",2,12.74,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","E10M C61S D97E F99S E141I T201M",6
"lib1","SARS-CoV-2","GTTGCTTAAGAGCATA",9,84.27,6.07,-4.7,0.61,1.5,1.17,0.01,">1 nonsynonymous","I28K F44T R136I",3
"lib1","SARS-CoV-2","GTTGCTTTGATACCAT",7,59.11,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10A R25N S41I K56M V115S R127S P149M",7
"lib1","SARS-CoV-2","GTTGGAAAATTTTGTA",3,32.74,9.11,-1.65,0.09,2.84,1.02,0,">1 nonsynonymous","N1E L125V T170S L183F",4
"lib1","SARS-CoV-2","GTTGGAAGGTAGACGC",5,0.2,NA,NA,NA,NA,NA,NA,"stop","F62V G83N A89D G146T F156*",5
"lib1","SARS-CoV-2","GTTGGAATCGTTAACT",5,0.5,NA,NA,NA,NA,NA,NA,"stop","C6R N64V F167*",3
"lib1","SARS-CoV-2","GTTGGACAGAGTACTT",3,13.02,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","K132W L162P",2
"lib1","SARS-CoV-2","GTTGGACCTGAAATGA",3,123.17,8.89,-1.87,0.11,2.32,1.13,0,">1 nonsynonymous","P7H D98Q Q163N T170W",4
"lib1","SARS-CoV-2","GTTGGACCTGCACTTT",2,10.66,6.85,-3.92,0.64,1.5,1.01,0.07,">1 nonsynonymous","N92S F126T V173F V182I",4
"lib1","SARS-CoV-2","GTTGGACTAATTGAGG",4,12.56,7.11,-3.65,0.48,1.5,1.28,0.04,">1 nonsynonymous","A42L Y50V K87T I142Q",4
"lib1","SARS-CoV-2","GTTGGACTATACAGTT",3,47.92,10.19,-0.58,0.08,2.75,1,0,"1 nonsynonymous","S45L",1
"lib1","SARS-CoV-2","GTTGGAGGTGTGTCTG",13,79.6,10,-0.76,0.06,2.66,1.01,0,">1 nonsynonymous","A42I C61I D90L T201R",4
"lib1","SARS-CoV-2","GTTGGATAAAACTGAT",10,77.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5V S36V A42Q T85V S113M N130T R136T",7
"lib1","SARS-CoV-2","GTTGGATATAAATGAG",1,13.12,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I2L C61V T85V F99S N107A P149V C158G",7
"lib1","SARS-CoV-2","GTTGGATCGCAGTAAT",7,66.55,10.81,0.04,0.04,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGCAAGTTACAAC",1,11.22,9.82,-0.94,0.21,2.17,1.02,0.02,">1 nonsynonymous","G51D L60G",2
"lib1","SARS-CoV-2","GTTGGCAGTAATCAAA",4,28.16,10.54,-0.22,0.06,2.91,1.08,0,"1 nonsynonymous","V173H",1
"lib1","SARS-CoV-2","GTTGGCAGTCACAGCC",1,34.41,8.74,-2.02,0.1,2.75,1.08,0,">1 nonsynonymous","L60Y G83L Q168K",3
"lib1","SARS-CoV-2","GTTGGCCACTTATCTT",1,1.47,NA,NA,NA,NA,NA,NA,"stop","T3M Y39* C61P N92Q D97T Y119S",6
"lib1","SARS-CoV-2","GTTGGCCCAAGGTATG",1,17.55,9.34,-1.43,0.19,1.78,1.07,0.01,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","GTTGGCGACGGATATC",1,21.69,10.57,-0.2,0.07,2.86,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGGACTACGCACA",2,33.1,8.21,-2.56,0.32,1.5,1.05,0.04,">1 nonsynonymous","N40M Y91G Y119E",3
"lib1","SARS-CoV-2","GTTGGGATCATAAAAC",4,45.08,9.46,-1.3,0.32,1.5,1,0.05,"1 nonsynonymous","I88S",1
"lib1","SARS-CoV-2","GTTGGGATGAAACAAA",5,94.98,10.69,-0.07,0.09,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGGCATAAGGTCA",4,111.13,6,-4.76,0.96,1.5,1.13,0.01,">1 nonsynonymous","D68G P133G T148G C150F Y178N",5
"lib1","SARS-CoV-2","GTTGGGCGCACCAAAT",1,18.98,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","S19K P82F",2
"lib1","SARS-CoV-2","GTTGGGGAAACTGACA",8,174.07,10.72,-0.04,0.06,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGGGAAGTTCAAC",3,18.95,8.04,-2.72,0.41,1.5,1.02,0.07,">1 nonsynonymous","P96T A105V",2
"lib1","SARS-CoV-2","GTTGGGGTTGTCATCC",22,217.24,9.93,-0.83,0.07,2.3,1.02,0,">1 nonsynonymous","N13L D98T",2
"lib1","SARS-CoV-2","GTTGGGTATAAATTAA",7,70.36,10.82,0.06,0.06,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTGGGTATTCCGAGC",7,123.51,10.72,-0.04,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGGTTCAAGAGCA",7,46.49,9.83,-0.93,0.1,2.33,1.02,0,">1 nonsynonymous","A81K E141L",2
"lib1","SARS-CoV-2","GTTGGTAACGAGGTTA",2,55.13,9.42,-1.35,0.14,2.15,1.06,0.01,">1 nonsynonymous","N1V D90F T170W",3
"lib1","SARS-CoV-2","GTTGGTAAGGAAAAAA",2,101.09,8.72,-2.04,0.08,2.5,1.13,0,">1 nonsynonymous","T85N Y143Q",2
"lib1","SARS-CoV-2","GTTGGTAATTCCTACT",3,12.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103K I138R",2
"lib1","SARS-CoV-2","GTTGGTAGAATTGACC",3,24.36,10.82,0.06,0.08,2.98,1,0,"1 nonsynonymous","N151R",1
"lib1","SARS-CoV-2","GTTGGTCAGAGGATCC",5,95.37,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6Y A81F Y93D Q176S",4
"lib1","SARS-CoV-2","GTTGGTCTCAGTCTAC",3,5.13,NA,NA,NA,NA,NA,NA,"stop","E10S P82W K94* Y143V G152S",5
"lib1","SARS-CoV-2","GTTGGTGATAGGCCAT",18,269.79,6.45,-4.31,0.34,1.5,1.17,0.01,">1 nonsynonymous","F12L G86Y",2
"lib1","SARS-CoV-2","GTTGGTGCCACAGAGG",1,13.26,10.52,-0.25,0.14,2.76,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","GTTGGTGTTGAAAAAA",6,177.53,9.54,-1.23,0.06,2.84,1.09,0,">1 nonsynonymous","Y143V L188V",2
"lib1","SARS-CoV-2","GTTGGTTACCCGACAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71M I88L",2
"lib1","SARS-CoV-2","GTTGGTTATGAATTGT",2,82.99,10.5,-0.27,0.05,2.88,1.05,0,">1 nonsynonymous","N58I N64G L122S S139G",4
"lib1","SARS-CoV-2","GTTGGTTTAAGCAATG",1,31.24,10.65,-0.11,0.12,2.73,1.07,0.01,">1 nonsynonymous","T55V K128N",2
"lib1","SARS-CoV-2","GTTGGTTTTGGTTTCT",1,12.71,10,-0.77,0.11,2.89,1.02,0,">1 nonsynonymous","C61S N107C K128Q P197A",4
"lib1","SARS-CoV-2","GTTGTAAACAATCTAT",5,143.65,10.69,-0.07,0.05,2.9,1.04,0,">1 nonsynonymous","F160T Q163H",2
"lib1","SARS-CoV-2","GTTGTAAACCAGACTA",7,1.47,NA,NA,NA,NA,NA,NA,"stop","R124P P149Y G155*",3
"lib1","SARS-CoV-2","GTTGTAAAGTTCCTGA",1,29.06,10.18,-0.59,0.11,2.65,1,0.01,">1 nonsynonymous","T15H S36E P149W",3
"lib1","SARS-CoV-2","GTTGTAAATATAATAC",1,9.66,6,-4.76,1.47,3,1.11,0,">1 nonsynonymous","C61V N157H G172I",3
"lib1","SARS-CoV-2","GTTGTAAATTCACTTG",3,76.66,8.55,-2.22,0.14,2.31,1.14,0.01,">1 nonsynonymous","T3L I28V N110G Y119V",4
"lib1","SARS-CoV-2","GTTGTAACCCAACACA",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A V77A D97L A105I Y143H",5
"lib1","SARS-CoV-2","GTTGTAACTTAACAGT",1,6.36,10.74,-0.02,0.11,2.92,1.05,0.01,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","GTTGTAATAGACATGG",10,163.95,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S36D E141K V173T R179C",4
"lib1","SARS-CoV-2","GTTGTAATCTATATAG",7,2.4,NA,NA,NA,NA,NA,NA,"stop","N13G I104* F160S",3
"lib1","SARS-CoV-2","GTTGTACAGTAGCCAT",4,112.14,10.7,-0.06,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGTACCCTATTTAT",3,0.72,NA,NA,NA,NA,NA,NA,"stop","A33Y R78*",2
"lib1","SARS-CoV-2","GTTGTAGCCCCATCGG",2,156.25,8.9,-1.86,0.1,2.29,1.16,0,">1 nonsynonymous","S29R Q176L",2
"lib1","SARS-CoV-2","GTTGTAGCTTAAGCGA",13,229.27,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F44A G101F Q176R",3
"lib1","SARS-CoV-2","GTTGTAGTATAAACAA",8,90.53,10.71,-0.06,0.05,2.91,1.04,0,">1 nonsynonymous","N4L I104F",2
"lib1","SARS-CoV-2","GTTGTATAAAGCTGTT",8,6.12,NA,NA,NA,NA,NA,NA,"stop","L5I Y21*",2
"lib1","SARS-CoV-2","GTTGTATAACAATCAC",4,84.93,10.61,-0.16,0.08,2.84,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGTATATAGGCTAA",18,217.96,10.12,-0.64,0.07,2.41,1.01,0,">1 nonsynonymous","Q84K P96T",2
"lib1","SARS-CoV-2","GTTGTATTTAAACGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","D97L V103Q G155*",3
"lib1","SARS-CoV-2","GTTGTCAAAAATCAGA",3,32.59,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V103L Y121R Q163F",3
"lib1","SARS-CoV-2","GTTGTCACGTCCTAAA",2,34.16,10.47,-0.29,0.1,2.97,1.03,0,">1 nonsynonymous","G51N N151H L183I",3
"lib1","SARS-CoV-2","GTTGTCACTGATGAAA",2,19.08,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9T Y50K V77M",3
"lib1","SARS-CoV-2","GTTGTCCAATACAAAA",4,59.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2S Y35Q Q84K L95R P177S",5
"lib1","SARS-CoV-2","GTTGTCCAATATGAGC",1,35.07,9.38,-1.38,0.08,2.77,1.1,0,">1 nonsynonymous","N1V L5W Y119A",3
"lib1","SARS-CoV-2","GTTGTCCACTAACAAC",2,23.39,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","D34R P82N A89V F167T K199Y",5
"lib1","SARS-CoV-2","GTTGTCCATCAAACGA",6,110.68,10.12,-0.64,0.09,2.38,1.02,0,">1 nonsynonymous","N30L D98K",2
"lib1","SARS-CoV-2","GTTGTCGAAGAACTTA",4,10.96,7.4,-3.36,0.37,1.5,1.16,0.04,">1 nonsynonymous","G9R T100K L183T",3
"lib1","SARS-CoV-2","GTTGTCGTGAACAGCA",3,130.2,8.82,-1.94,0.06,2.84,1.13,0,">1 nonsynonymous","K114A G166W",2
"lib1","SARS-CoV-2","GTTGTCTTAAGATAGA",5,60.88,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I28K T100K N107Y P133Y",4
"lib1","SARS-CoV-2","GTTGTGAACGATGGAC",4,7.75,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","C6W R25S E76D",3
"lib1","SARS-CoV-2","GTTGTGAGAGTCATGA",4,26.98,10.86,0.1,0.11,2.85,1.04,0,"1 nonsynonymous","S200Q",1
"lib1","SARS-CoV-2","GTTGTGATATCTCAAT",2,33.97,6,-4.76,1.8,1.5,1.21,0.01,">1 nonsynonymous","V11S R73M I138R P149L",4
"lib1","SARS-CoV-2","GTTGTGATCACCCTTT",5,1.43,NA,NA,NA,NA,NA,NA,"stop","N4H V77W A105N L125* N157* P197L",6
"lib1","SARS-CoV-2","GTTGTGATTATTTAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N120*",1
"lib1","SARS-CoV-2","GTTGTGCCATATATAC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","T46* V65*",2
"lib1","SARS-CoV-2","GTTGTGCGCAACAGTA",6,62.33,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K26A F62E N110L Y175K",4
"lib1","SARS-CoV-2","GTTGTGGGAATCGAGG",5,2.71,NA,NA,NA,NA,NA,NA,"stop","S41* N118P E141F T148A C158S",5
"lib1","SARS-CoV-2","GTTGTGGGAGTCTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149S F185L P197A",3
"lib1","SARS-CoV-2","GTTGTGTAATCACTCC",1,89.44,9.24,-1.52,0.18,1.59,1.14,0.01,">1 nonsynonymous","Y39V F99I R136K",3
"lib1","SARS-CoV-2","GTTGTGTATTTTGGAT",4,61.53,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6Y D90P G117L G152Q",4
"lib1","SARS-CoV-2","GTTGTTAAACACCGGG",3,9.21,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19L F99K W106L L183R",4
"lib1","SARS-CoV-2","GTTGTTAAACTTAAAT",1,44.51,10.74,-0.03,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTGTTAAATTGCTAG",3,60.41,10.8,0.03,0.07,2.88,1.04,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","GTTGTTACTAATAATC",12,208.78,10.2,-0.57,0.05,2.66,1.03,0,">1 nonsynonymous","E10R T15R",2
"lib1","SARS-CoV-2","GTTGTTAGCCACGTAA",2,30.29,10.27,-0.49,0.1,2.81,1.05,0,"1 nonsynonymous","G51M",1
"lib1","SARS-CoV-2","GTTGTTAGTTCTCGTA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","N40D G86F L95F T148*",4
"lib1","SARS-CoV-2","GTTGTTCAGTGCCAAG",6,76.83,10.02,-0.74,0.08,2.78,1.06,0,">1 nonsynonymous","C6G V37N N64S",3
"lib1","SARS-CoV-2","GTTGTTCGGAGACAAA",1,21.43,10.5,-0.26,0.08,2.9,1.08,0,">1 nonsynonymous","E154D T201R",2
"lib1","SARS-CoV-2","GTTGTTCTGTTATCGT",1,6.38,10.79,0.03,0.05,3,1,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","GTTGTTGATACTTACA",4,63.07,10.1,-0.66,0.09,2.81,1.02,0,">1 nonsynonymous","G9W C31H",2
"lib1","SARS-CoV-2","GTTGTTGGGTGCATGA",4,74.18,9.8,-0.97,0.11,2.22,1.05,0,"1 nonsynonymous","V11E",1
"lib1","SARS-CoV-2","GTTGTTGGTGAAAGGA",12,83.02,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V37L Y93S",2
"lib1","SARS-CoV-2","GTTGTTGTGTTGTGCA",1,12.14,10.23,-0.53,0.05,3,1,0,"1 nonsynonymous","V11M",1
"lib1","SARS-CoV-2","GTTGTTTATACTATAA",11,119.86,10.17,-0.6,0.08,2.66,1.02,0,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","GTTGTTTCCGACATCC",3,70.16,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","D98K N151C G172R",3
"lib1","SARS-CoV-2","GTTGTTTGATCCATTC",9,125.33,10.48,-0.28,0.04,2.96,1.01,0,">1 nonsynonymous","S43G D90E L122W",3
"lib1","SARS-CoV-2","GTTTAAAAACTGATGA",2,9.08,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","R27I K48R P54C Y91R A105P S129D",6
"lib1","SARS-CoV-2","GTTTAAAAATTCCGCG",1,11.92,9.96,-0.8,0.19,2.64,1.04,0.01,"1 nonsynonymous","D34F",1
"lib1","SARS-CoV-2","GTTTAAAAGTTGAAGA",2,31.81,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F44N R124Y R136Y E154H",4
"lib1","SARS-CoV-2","GTTTAAACATACACAC",3,112.21,10.58,-0.18,0.06,2.87,1.08,0,">1 nonsynonymous","D90L T100Y",2
"lib1","SARS-CoV-2","GTTTAAACATGGTGGT",3,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C F99P Q144S S164T",4
"lib1","SARS-CoV-2","GTTTAAACCAGACAAC",2,5.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F D68Q N118L S184G",4
"lib1","SARS-CoV-2","GTTTAAACCTTATTTT",2,2.51,NA,NA,NA,NA,NA,NA,"stop","D90* G101S",2
"lib1","SARS-CoV-2","GTTTAAAGACCCCTGT",10,245.27,10.67,-0.1,0.05,2.88,1.06,0,">1 nonsynonymous","G83C Y91F",2
"lib1","SARS-CoV-2","GTTTAAAGCACATGAA",9,0.02,NA,NA,NA,NA,NA,NA,"stop","G86* N118S P133T",3
"lib1","SARS-CoV-2","GTTTAAATACATACCT",2,38.14,9.54,-1.23,0.11,2.44,1.08,0.01,">1 nonsynonymous","V32M Q144D P169Q",3
"lib1","SARS-CoV-2","GTTTAAATATTACCGT",1,33.63,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","L122A E141V C158G",3
"lib1","SARS-CoV-2","GTTTAAATCTACGAAC",8,133.35,10.35,-0.42,0.04,2.89,1.04,0,"1 nonsynonymous","V52W",1
"lib1","SARS-CoV-2","GTTTAAATGATTACTA",3,108,8.93,-1.84,0.09,2.45,1.13,0,">1 nonsynonymous","D90V I142V G166A",3
"lib1","SARS-CoV-2","GTTTAAATGTTAAGCA",8,77.12,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C61S L131F R136T",3
"lib1","SARS-CoV-2","GTTTAAATTAGATATC",2,59.68,10.2,-0.57,0.07,2.79,1.04,0,">1 nonsynonymous","S53T C61Y Y178N",3
"lib1","SARS-CoV-2","GTTTAAATTCAATATC",1,9.24,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","Y50C T100L I104T F160A",4
"lib1","SARS-CoV-2","GTTTAAATTTTATAAG",5,24.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F44I R73V D75Y Y119R L125A",5
"lib1","SARS-CoV-2","GTTTAACAAAAAAGAC",12,103.05,9.96,-0.8,0.08,2.39,1.04,0,">1 nonsynonymous","S53T E135L",2
"lib1","SARS-CoV-2","GTTTAACCCACTAGAT",1,14.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12K I28E S43D D90W N118T L188P T193G",7
"lib1","SARS-CoV-2","GTTTAACTGACAGGTA",3,38.75,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88L G172I",2
"lib1","SARS-CoV-2","GTTTAAGAAATCAATA",3,83.46,9.7,-1.07,0.06,2.75,1.05,0,"1 nonsynonymous","D112E",1
"lib1","SARS-CoV-2","GTTTAAGAACTAACCT",5,41.59,9.88,-0.88,0.08,2.06,1.03,0,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","GTTTAAGAGGGGATTA",6,58.43,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F17Y I80G",2
"lib1","SARS-CoV-2","GTTTAAGAGGTATCTG",4,60.43,10.57,-0.2,0.06,2.93,1,0,">1 nonsynonymous","N1Y L60V",2
"lib1","SARS-CoV-2","GTTTAAGATCTCCACT",4,38.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y21F P82Y T201S",3
"lib1","SARS-CoV-2","GTTTAAGCATCCGCCT",2,12.19,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","S29K Y50S D90T S113L G166P",5
"lib1","SARS-CoV-2","GTTTAAGCGCAATTTA",3,16.09,6.8,-3.97,0.52,1.5,1.02,0.05,">1 nonsynonymous","L5V Y35E A42K R73W",4
"lib1","SARS-CoV-2","GTTTAAGGATCATCCG",4,15.66,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","A42S A67L D98G V103R S184V",5
"lib1","SARS-CoV-2","GTTTAAGTACAATTCT",2,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64F T148N",2
"lib1","SARS-CoV-2","GTTTAAGTAGCCAAAA",1,11.87,8.64,-2.13,0.15,3,1.05,0.01,">1 nonsynonymous","S113T I142P",2
"lib1","SARS-CoV-2","GTTTAAGTGAGCTAAA",7,21.28,6.35,-4.42,0.85,1.5,1.15,0.04,">1 nonsynonymous","G74Y F99R W106A",3
"lib1","SARS-CoV-2","GTTTAAGTTCGTCTCT",4,23.63,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N4S S29V A81Y I88N T148I",5
"lib1","SARS-CoV-2","GTTTAATAAACAAGAA",1,17.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E A42R G172S",3
"lib1","SARS-CoV-2","GTTTAATAAACATTAC",4,40,10.74,-0.02,0.07,2.92,1.06,0,">1 nonsynonymous","P149R K198A",2
"lib1","SARS-CoV-2","GTTTAATACTACAACG",4,8.32,10.16,-0.6,0.12,1.99,1,0.01,">1 nonsynonymous","V77L P82F D98Q",3
"lib1","SARS-CoV-2","GTTTAATAGAACGGAG",15,26.31,6,-4.76,2,3,1.36,0.02,">1 nonsynonymous","S164R L183N",2
"lib1","SARS-CoV-2","GTTTAATAGTAACAGG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S129I S139D E154* Q168F A192T",5
"lib1","SARS-CoV-2","GTTTAATATAAAAGGC",2,60.62,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P54I I142F C150W V180T T201S",5
"lib1","SARS-CoV-2","GTTTAATATCTCAAAC",1,17.46,6.79,-3.97,0.41,1.5,1.22,0.02,">1 nonsynonymous","I80V Y121S F126L N151M",4
"lib1","SARS-CoV-2","GTTTAATCAAATCAAC",2,37.39,8.3,-2.46,0.19,1.5,1.08,0.01,">1 nonsynonymous","V37I L60V N120G R127N",4
"lib1","SARS-CoV-2","GTTTAATCGAAGACGC",5,48.34,8.57,-2.19,0.22,1.52,1.07,0.02,">1 nonsynonymous","K132V P161C",2
"lib1","SARS-CoV-2","GTTTAATCGTAGAGCA",3,18.15,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F62A F99A P197A",3
"lib1","SARS-CoV-2","GTTTAATGGATAGCAA",1,16.25,10.19,-0.58,0.12,2.78,1,0.01,">1 nonsynonymous","D34N F47V V153R F160D",4
"lib1","SARS-CoV-2","GTTTAATGGATATATG",1,31.29,7.23,-3.53,0.16,2.34,1.12,0.01,">1 nonsynonymous","N4V F126V T170V",3
"lib1","SARS-CoV-2","GTTTAATGTCATATAG",7,64.82,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y35N R179N",2
"lib1","SARS-CoV-2","GTTTAATTCAAACGTG",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R S41P I88M F134Y T148A",5
"lib1","SARS-CoV-2","GTTTAATTCGATAAGG",4,56.3,8.49,-2.27,0.29,1.76,1.11,0.03,">1 nonsynonymous","N107V G166C",2
"lib1","SARS-CoV-2","GTTTAATTTAATTCAA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","V20W T55* L131E",3
"lib1","SARS-CoV-2","GTTTAATTTCCTGCTG",2,79.07,10.61,-0.16,0.07,2.84,1.04,0,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","GTTTACAAAAAATTCC",3,21.98,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S45F T85E G117N S147N N151I T201R",6
"lib1","SARS-CoV-2","GTTTACACTATAAAGG",1,10.27,6.01,-4.75,0.88,3,1.08,0.01,">1 nonsynonymous","L60F Y66C Y93W",3
"lib1","SARS-CoV-2","GTTTACACTTAAGAAT",4,16,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","D68G S129L C158R T201C",4
"lib1","SARS-CoV-2","GTTTACAGACACAAAG",6,53.73,10.19,-0.57,0.05,2.97,1,0,">1 nonsynonymous","T100V I142Q",2
"lib1","SARS-CoV-2","GTTTACAGAGATTGGG",3,439.73,9.9,-0.86,0.07,2.64,1.03,0,">1 nonsynonymous","C6Y R136K",2
"lib1","SARS-CoV-2","GTTTACATACCATTGG",11,23.39,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","I2P A22V T55L T100A L122P P133T G196V",7
"lib1","SARS-CoV-2","GTTTACCAAATGAGTA",5,47.38,9.89,-0.88,0.12,2.38,1.05,0.01,">1 nonsynonymous","D34M L60S",2
"lib1","SARS-CoV-2","GTTTACCATAACTGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L I88V N107A",3
"lib1","SARS-CoV-2","GTTTACCATTTAACTA",4,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S G146L",2
"lib1","SARS-CoV-2","GTTTACCGCAATAGCA",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146M P161Y C195F",3
"lib1","SARS-CoV-2","GTTTACGAAGCCTAAA",2,12.42,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C61S F99L N157F",3
"lib1","SARS-CoV-2","GTTTACGACATGAAAT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46K G101V S139N P161F P191F",5
"lib1","SARS-CoV-2","GTTTACGCACTTAGCT",4,95.5,10.81,0.05,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTACGTGGTATCCC",5,34.76,7.79,-2.98,0.2,1.55,1.14,0.01,">1 nonsynonymous","R27L Y35N T170N F185G",4
"lib1","SARS-CoV-2","GTTTACTAAATTCACG",7,11.73,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","P82Y N120L",2
"lib1","SARS-CoV-2","GTTTACTCACCGGTAC",3,59.3,6.26,-4.51,0.56,1.5,1.24,0.02,">1 nonsynonymous","R16I A105C Y178L",3
"lib1","SARS-CoV-2","GTTTACTCCAAGTAAT",2,65.32,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A14I R25V I72C P96R",4
"lib1","SARS-CoV-2","GTTTACTCGAAAAGTT",8,48.57,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D90L F167P P197F",3
"lib1","SARS-CoV-2","GTTTACTGTAATACCA",1,30.69,10.27,-0.49,0.08,2.92,1,0,"1 nonsynonymous","A14H",1
"lib1","SARS-CoV-2","GTTTACTTGAGAATGT",1,13.38,6.39,-4.37,0.49,1.5,1.03,0.02,">1 nonsynonymous","L38R D59L I72S W106E C158T",5
"lib1","SARS-CoV-2","GTTTACTTTCTATATA",2,26.85,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37F V77T C102L C150G",4
"lib1","SARS-CoV-2","GTTTAGACGTAAACGG",4,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I A14F G101M V180M",4
"lib1","SARS-CoV-2","GTTTAGCATACGGTTG",5,26.45,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L60V F99G W106S",3
"lib1","SARS-CoV-2","GTTTAGGGCCCCGAAA",4,33.73,10.86,0.1,0.06,2.9,1.04,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","GTTTAGGGCGTCCAAT",6,33.72,9.01,-1.75,0.2,1.66,1.16,0.02,">1 nonsynonymous","I28S L60G",2
"lib1","SARS-CoV-2","GTTTAGTAATCGCGGA",1,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131G",1
"lib1","SARS-CoV-2","GTTTAGTACGGGTGTT",7,128.46,10.68,-0.09,0.04,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTAGTCGGTGTCTA",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S C61I E76K Q84T K114V Y178L",6
"lib1","SARS-CoV-2","GTTTAGTGAAACCTAA",1,35.16,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P133G C158T Y178A",3
"lib1","SARS-CoV-2","GTTTAGTTGAAGAGAT",13,105.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D34G I88K S184Y",3
"lib1","SARS-CoV-2","GTTTATAAAAGATTCC",2,30.69,9.05,-1.71,0.15,2.64,1.18,0.01,">1 nonsynonymous","D90L Y159H G174S T201L",4
"lib1","SARS-CoV-2","GTTTATAAAGCATAAC",2,1.58,NA,NA,NA,NA,NA,NA,"stop","K26A P133*",2
"lib1","SARS-CoV-2","GTTTATAAATCAATTC",2,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R C6V V77R W106K V173M",5
"lib1","SARS-CoV-2","GTTTATAATACATCCT",10,3.77,NA,NA,NA,NA,NA,NA,"stop","N40K F156*",2
"lib1","SARS-CoV-2","GTTTATACTAGACACC",3,72.83,10.55,-0.21,0.05,2.83,1.12,0,">1 nonsynonymous","V32H L111N",2
"lib1","SARS-CoV-2","GTTTATATGTAGAAAC",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S S41V L131W",3
"lib1","SARS-CoV-2","GTTTATGCCTCGGAGG",4,54.71,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G86V C102L",2
"lib1","SARS-CoV-2","GTTTATGGAACGATGA",7,26.09,9.26,-1.51,0.09,2.44,1.06,0,"1 nonsynonymous","D75P",1
"lib1","SARS-CoV-2","GTTTATTACAAAAGCC",5,143.07,10.81,0.05,0.07,2.89,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTTATTCCAAACTAT",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L E141S",2
"lib1","SARS-CoV-2","GTTTATTCTTAAAAAA",4,72.71,9.86,-0.9,0.12,2.13,1.09,0,">1 nonsynonymous","R78G S139F H189Y T201W",4
"lib1","SARS-CoV-2","GTTTATTGAACACGAA",4,0.39,NA,NA,NA,NA,NA,NA,"stop","G86V L125N C150*",3
"lib1","SARS-CoV-2","GTTTATTTCCCTATTC",1,9.7,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","V103T S129M G172M",3
"lib1","SARS-CoV-2","GTTTCAAACAATACGA",1,10.59,8.41,-2.36,0.44,1.74,1.03,0.08,">1 nonsynonymous","E10Y Y165L",2
"lib1","SARS-CoV-2","GTTTCAAATTCACTAG",1,9.53,NA,NA,NA,NA,NA,NA,"stop","K56S G86D G116* V173E P197A",5
"lib1","SARS-CoV-2","GTTTCAACACGACTTT",4,0.42,NA,NA,NA,NA,NA,NA,"stop","D90N S129F T201*",3
"lib1","SARS-CoV-2","GTTTCAACTGAAATTA",16,515.17,10.65,-0.11,0.03,2.93,1.03,0,">1 nonsynonymous","G9N S53Y D59Q",3
"lib1","SARS-CoV-2","GTTTCAATAATTACCC",9,50.05,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N58L A89C P96T S129Y",4
"lib1","SARS-CoV-2","GTTTCAATCGCATGAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","T3K T15W Y35R G83*",4
"lib1","SARS-CoV-2","GTTTCACAAAGGACCA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","V11R K56T D97A G152*",4
"lib1","SARS-CoV-2","GTTTCACATGAATCAG",7,99.59,9.93,-0.84,0.09,2.15,1.04,0,">1 nonsynonymous","F99L F160V",2
"lib1","SARS-CoV-2","GTTTCACTTAGTATAA",6,0.24,NA,NA,NA,NA,NA,NA,"stop","V11Y Y39* T46D P54V",4
"lib1","SARS-CoV-2","GTTTCAGCAATATGAT",4,37.07,10.77,0,0.07,2.81,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTCAGCGATATCGC",1,9.2,10.7,-0.06,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTCAGTCGACTGAA",5,83.2,6,-4.76,2,2.41,1.21,0.01,">1 nonsynonymous","I2L G83N Q144C Y175E",4
"lib1","SARS-CoV-2","GTTTCAGTGTAACTTT",3,19.83,10.05,-0.71,0.12,2.36,1.02,0.01,">1 nonsynonymous","N13S D90T",2
"lib1","SARS-CoV-2","GTTTCAGTTTTATTAC",5,18.65,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49G K87T K94A",3
"lib1","SARS-CoV-2","GTTTCATTATTAAAGC",4,19.34,10.47,-0.29,0.09,2.81,1.05,0,"1 nonsynonymous","G152W",1
"lib1","SARS-CoV-2","GTTTCATTCAAGCTTC",2,2.84,NA,NA,NA,NA,NA,NA,"stop","F126T P133Y C150* R179P",4
"lib1","SARS-CoV-2","GTTTCATTGCCAATTG",1,6.76,6,-4.76,2,3,1.02,0.01,">1 nonsynonymous","F44L L60N A105S D112R",4
"lib1","SARS-CoV-2","GTTTCATTTAGGAATT",5,80.66,10.2,-0.57,0.05,2.94,1,0,">1 nonsynonymous","L60M Y143L",2
"lib1","SARS-CoV-2","GTTTCCAACCGTGTTT",7,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140Q C150D",2
"lib1","SARS-CoV-2","GTTTCCAAGGCCTTTC",3,24.58,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N107F I142K P197E",3
"lib1","SARS-CoV-2","GTTTCCACGGAGTAGT",4,48.86,10.16,-0.6,0.09,2.69,1.06,0.01,"1 nonsynonymous","P133K",1
"lib1","SARS-CoV-2","GTTTCCAGTGATGACA",1,36.62,8.55,-2.22,0.11,2.89,1.1,0.01,">1 nonsynonymous","T46S Y159L",2
"lib1","SARS-CoV-2","GTTTCCATAGATGAAG",5,70.58,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R16F G51K N92P G146R G152I",5
"lib1","SARS-CoV-2","GTTTCCATATTTATTG",1,24.68,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S29A A105H V115G F156N",4
"lib1","SARS-CoV-2","GTTTCCCACCACATCA",5,70.02,9.69,-1.07,0.09,2.72,1.07,0,">1 nonsynonymous","A33L Y119K",2
"lib1","SARS-CoV-2","GTTTCCCACGACACCT",4,1.49,NA,NA,NA,NA,NA,NA,"stop","C31I Y50* N58T N118Q K128*",5
"lib1","SARS-CoV-2","GTTTCCCATAGAATTG",3,0.81,NA,NA,NA,NA,NA,NA,"stop","I2N T46E L95S L122R Y165*",5
"lib1","SARS-CoV-2","GTTTCCCCTTTGAGTT",6,108.99,10.73,-0.04,0.05,2.95,1.03,0,">1 nonsynonymous","G83L K199F",2
"lib1","SARS-CoV-2","GTTTCCCGAAAAAATG",6,58.45,7.97,-2.8,0.29,1.5,1.05,0.03,">1 nonsynonymous","V103M G146D T201D",3
"lib1","SARS-CoV-2","GTTTCCCGTAACGAGG",4,0.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36Q",1
"lib1","SARS-CoV-2","GTTTCCCTCTATGAAA",1,34.2,8.68,-2.08,0.12,2.9,1.03,0.01,">1 nonsynonymous","Y35I N40P N130Q Q168L",4
"lib1","SARS-CoV-2","GTTTCCGAATGTAACA",2,17.53,8.52,-2.24,0.18,1.5,1.01,0.02,">1 nonsynonymous","A42S A105D",2
"lib1","SARS-CoV-2","GTTTCCGCTAATTATA",1,31.41,8.63,-2.14,0.07,1.67,1.04,0,"1 nonsynonymous","V65P",1
"lib1","SARS-CoV-2","GTTTCCGTACACCAGG",5,147.59,10.2,-0.57,0.05,2.83,1.02,0,">1 nonsynonymous","I138Q Q144V V173L",3
"lib1","SARS-CoV-2","GTTTCCTCAGAAGCAT",1,2.68,NA,NA,NA,NA,NA,NA,"stop","L60V Y66D R78L T100S L122*",5
"lib1","SARS-CoV-2","GTTTCCTCCATTAAAG",1,25.2,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T55C N107T T170N",3
"lib1","SARS-CoV-2","GTTTCGAAGCGGTCCT",1,19.36,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A33E I104S F126N I142K",4
"lib1","SARS-CoV-2","GTTTCGATACCTATTA",5,43.27,9.14,-1.62,0.08,2.8,1.07,0,">1 nonsynonymous","A14Q Y121A F156V",3
"lib1","SARS-CoV-2","GTTTCGCGAACATGGC",4,65.6,8.86,-1.9,0.18,1.5,1.14,0.01,">1 nonsynonymous","I28E I104V",2
"lib1","SARS-CoV-2","GTTTCGCGAAGGCAGG",1,14.43,10,-0.76,0.11,2.85,1.04,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","GTTTCGCGTCTAAAAC",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V K87A V103T G166I",4
"lib1","SARS-CoV-2","GTTTCGGACTCCGCCA",6,10.06,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Q84S P161L",2
"lib1","SARS-CoV-2","GTTTCGGAGACAAAGT",5,39.78,6.16,-4.61,0.81,1.5,1.23,0.02,">1 nonsynonymous","S36K K114N G172C",3
"lib1","SARS-CoV-2","GTTTCGGGAAAGAAGG",4,21.23,10.89,0.13,0.08,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTCTAAAACACTCG",1,28.88,8.58,-2.18,0.41,1.54,1.18,0.06,">1 nonsynonymous","D97Y E141R N157L",3
"lib1","SARS-CoV-2","GTTTCTAAATATGATT",4,9.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K128C P161Y",2
"lib1","SARS-CoV-2","GTTTCTAAATGATTGC",8,83.27,7.89,-2.88,0.26,1.5,1.13,0.02,">1 nonsynonymous","A89L L122Y",2
"lib1","SARS-CoV-2","GTTTCTAAGCAAGAAC",3,24.08,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","P82V P149D F167G V173C",4
"lib1","SARS-CoV-2","GTTTCTACATCACTTT",2,34.36,6.31,-4.45,0.7,1.5,1.19,0.02,">1 nonsynonymous","L5P Y35S F167L",3
"lib1","SARS-CoV-2","GTTTCTATCGAATAAA",2,23.64,8.35,-2.42,0.22,1.99,1.14,0.02,">1 nonsynonymous","T3R L95V P149C T170C",4
"lib1","SARS-CoV-2","GTTTCTCAAATAAATG",5,27.15,6,-4.76,1.02,1.5,1.1,0.01,">1 nonsynonymous","A42H F160S F167T Y178S T201K",5
"lib1","SARS-CoV-2","GTTTCTCAGATAAATA",2,19.4,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","Y119F N157P",2
"lib1","SARS-CoV-2","GTTTCTCTTGAAATCT",5,50.39,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F47S I72A G83I F99I G117Y",5
"lib1","SARS-CoV-2","GTTTCTGCACCCCGAA",3,66.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6Y F47Y I88K",3
"lib1","SARS-CoV-2","GTTTCTGTGTCCAGGA",3,11.03,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G74Y W106K",2
"lib1","SARS-CoV-2","GTTTCTTAGGAAGCGA",2,20.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","W23K I88H",2
"lib1","SARS-CoV-2","GTTTCTTCGAATCTCA",7,81.93,10.77,0,0.06,2.96,1.02,0,">1 nonsynonymous","L122M T201F",2
"lib1","SARS-CoV-2","GTTTCTTGTTTATGGC",6,45.95,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","C6S D112S",2
"lib1","SARS-CoV-2","GTTTCTTTGTAAAGCC",4,67.96,7.33,-3.43,0.22,1.5,1.1,0.01,">1 nonsynonymous","G83K W106R Y119H I142Y",4
"lib1","SARS-CoV-2","GTTTGAAAAAAGATGA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","T3I S41R W106L K114* N120L S139A",6
"lib1","SARS-CoV-2","GTTTGAAAATCCGTGG",8,350.23,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2P F62W L122W Q176P",4
"lib1","SARS-CoV-2","GTTTGAAATACTACAG",9,66.67,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S29V P149Q Q168S V182W",4
"lib1","SARS-CoV-2","GTTTGAACCTGTGCGA",3,33.48,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L95H T148N F167W",3
"lib1","SARS-CoV-2","GTTTGAAGCAAATACC",5,18.48,10.78,0.01,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTGAAGGAATATAC",2,6.46,6.09,-4.68,1,1.5,1.07,0.03,">1 nonsynonymous","R27P V37L F99L I142A",4
"lib1","SARS-CoV-2","GTTTGAAGTCGAGTAA",28,197.35,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45Y L122G C158P",3
"lib1","SARS-CoV-2","GTTTGAATAACAAGCA",1,6.47,10.09,-0.67,0.05,2.99,1.05,0,"1 nonsynonymous","A145C",1
"lib1","SARS-CoV-2","GTTTGAATACTCAAGA",3,83.96,9.64,-1.12,0.06,2.81,1.07,0,">1 nonsynonymous","N118F T201I",2
"lib1","SARS-CoV-2","GTTTGAATCTTAACAC",12,44.23,6.25,-4.52,0.45,1.5,1.13,0.01,">1 nonsynonymous","S129V R136W P149G T170L",4
"lib1","SARS-CoV-2","GTTTGACGGATAGCCA",3,71.67,9.84,-0.92,0.09,1.92,1.12,0,">1 nonsynonymous","S36E P96Q E141Q",3
"lib1","SARS-CoV-2","GTTTGACGTAAAAATC",9,250.33,10.77,0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTGACTGGCAATAA",6,39.22,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N1S F12S K132R Q176E",4
"lib1","SARS-CoV-2","GTTTGAGCGATGCCAG",3,72.51,10.75,-0.01,0.06,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTTGAGCGATGGACG",5,64.48,8.32,-2.45,0.24,1.5,1.14,0.02,">1 nonsynonymous","I2H G51H D68H",3
"lib1","SARS-CoV-2","GTTTGAGTGTCTGAAT",3,1.37,NA,NA,NA,NA,NA,NA,"stop","S36W C61T I88G S129* C158R",5
"lib1","SARS-CoV-2","GTTTGATCATATAAAC",1,0.47,NA,NA,NA,NA,NA,NA,"stop","L60T T85I V173*",3
"lib1","SARS-CoV-2","GTTTGATCGACTTAAG",4,36.2,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","T15M F167T",2
"lib1","SARS-CoV-2","GTTTGATGCGCGATTA",2,9.27,9.49,-1.27,0.26,1.98,1.2,0.02,">1 nonsynonymous","T55N Y165N",2
"lib1","SARS-CoV-2","GTTTGATGTAAAAGCT",2,0.04,NA,NA,NA,NA,NA,NA,"stop","A33* C61R",2
"lib1","SARS-CoV-2","GTTTGATTTTAATTAA",11,177.5,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20E Y35R R127L T170E",4
"lib1","SARS-CoV-2","GTTTGCACTCCTATGC",2,77.48,10.25,-0.51,0.04,2.87,1.03,0,"1 nonsynonymous","Q144Y",1
"lib1","SARS-CoV-2","GTTTGCATATTCTAAA",1,22.52,10.98,0.22,0.09,2.85,1.04,0,">1 nonsynonymous","V37Q N64S",2
"lib1","SARS-CoV-2","GTTTGCCAGACTGTTA",5,73.95,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F12V G146A Y159G",3
"lib1","SARS-CoV-2","GTTTGCCTAAATGTTA",10,68.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5F G9T R16H G83F I104K G117S",6
"lib1","SARS-CoV-2","GTTTGCGACACTATAT",1,18.01,6.8,-3.96,0.33,1.53,1.17,0.02,">1 nonsynonymous","R25N T100K R136Y",3
"lib1","SARS-CoV-2","GTTTGCGTAATTCATT",2,71.49,7.51,-3.26,0.36,1.5,1.16,0.04,">1 nonsynonymous","F17L G83A S129V",3
"lib1","SARS-CoV-2","GTTTGCGTGCTTGCGA",1,17.9,10.62,-0.14,0.1,2.89,1.09,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","GTTTGCGTTCTTATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42G F99I A105*",3
"lib1","SARS-CoV-2","GTTTGCTAATCGCGGA",1,25.41,9.94,-0.83,0.11,2.75,1.05,0.01,">1 nonsynonymous","C6S N171S",2
"lib1","SARS-CoV-2","GTTTGCTTGGTGCCAT",2,20.95,8.51,-2.25,0.22,1.55,1.1,0.03,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","GTTTGGAACTGGGACG",1,9.1,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","C6P F44S C49V L60H D90T",5
"lib1","SARS-CoV-2","GTTTGGACCCCACAAC",6,107.35,10.66,-0.1,0.04,2.92,1.04,0,">1 nonsynonymous","K114E V173Q",2
"lib1","SARS-CoV-2","GTTTGGAGAGCTCATG",1,0,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib1","SARS-CoV-2","GTTTGGAGCGGCCCAG",12,317.78,10.12,-0.64,0.04,2.71,1,0,">1 nonsynonymous","S36Y A145S H189I",3
"lib1","SARS-CoV-2","GTTTGGAGGCAAAAGT",3,1.01,NA,NA,NA,NA,NA,NA,"stop","L60* D68V D97L K198E",4
"lib1","SARS-CoV-2","GTTTGGGAATCACCTC",3,77.76,8.37,-2.39,0.16,2.35,1.11,0.01,">1 nonsynonymous","N107K F156G",2
"lib1","SARS-CoV-2","GTTTGGGCAAATGTAA",1,15.86,9.56,-1.2,0.43,1.5,1,0.07,">1 nonsynonymous","F8V I28K",2
"lib1","SARS-CoV-2","GTTTGGGCTTTCGAAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I D112R N118S Y159E V173P",5
"lib1","SARS-CoV-2","GTTTGGTACATCAAAA",5,22.54,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","Y50S W106L P177L",3
"lib1","SARS-CoV-2","GTTTGGTGAATTACAA",19,214,10.75,-0.02,0.04,2.96,1.02,0,"1 nonsynonymous","G9Q",1
"lib1","SARS-CoV-2","GTTTGGTGTCACAACA",1,8.52,10.83,0.07,0.36,2.61,1,0.04,"1 nonsynonymous","A81E",1
"lib1","SARS-CoV-2","GTTTGGTTGCAAAGTA",4,84.05,6.27,-4.49,0.7,1.5,1.24,0.03,">1 nonsynonymous","G86L R127L C150S G174L",4
"lib1","SARS-CoV-2","GTTTGTAATGTAATGA",2,43.67,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6M F44I K48R V77M T100R F134S",6
"lib1","SARS-CoV-2","GTTTGTCAAGACAGGG",7,91.71,6,-4.76,1.96,1.5,1.2,0.02,">1 nonsynonymous","Y39V K114P R127M",3
"lib1","SARS-CoV-2","GTTTGTCATTGCGTAG",1,9.35,6,-4.76,2,3,1.1,0,">1 nonsynonymous","Y123V L162P F167W",3
"lib1","SARS-CoV-2","GTTTGTTAAAATTAGA",3,148.37,10.73,-0.04,0.06,2.91,1.06,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","GTTTGTTAACTATCTA",6,48.83,10.49,-0.28,0.07,2.79,1.08,0,"1 nonsynonymous","A18G",1
"lib1","SARS-CoV-2","GTTTGTTGTTACTCAC",1,20.47,6.04,-4.73,0.88,1.5,1.14,0.02,">1 nonsynonymous","G9K A33N T55I C158E",4
"lib1","SARS-CoV-2","GTTTGTTTGGTACAGG",6,30.77,6.69,-4.07,0.27,1.5,1.08,0.01,">1 nonsynonymous","E10R V180R",2
"lib1","SARS-CoV-2","GTTTTAAACGACTCCT",13,160.32,10.67,-0.09,0.06,2.91,1.06,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","GTTTTAAAGCCCCATC",4,34.18,6.04,-4.72,0.81,1.5,1.13,0.02,">1 nonsynonymous","P54H G116R Y143C P149E T170S",5
"lib1","SARS-CoV-2","GTTTTAAATAGAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* K48S",2
"lib1","SARS-CoV-2","GTTTTAAATCCGATGC",10,145.56,10.44,-0.32,0.05,2.89,1.02,0,">1 nonsynonymous","S45Y T55S N120R",3
"lib1","SARS-CoV-2","GTTTTAATTAGAAAAA",2,76.02,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6L K26E K56S G172Q",4
"lib1","SARS-CoV-2","GTTTTACACATTAGAT",3,14.53,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T15V S19E V103I",3
"lib1","SARS-CoV-2","GTTTTACAGGTGCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* T100F",2
"lib1","SARS-CoV-2","GTTTTACATACCGTGT",3,1.28,NA,NA,NA,NA,NA,NA,"stop","W106T L125F T201*",3
"lib1","SARS-CoV-2","GTTTTACATATAATGG",5,50.82,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10V S19T A105W I142M",4
"lib1","SARS-CoV-2","GTTTTACATGAGCATA",4,34.19,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1F F12M V20S D68V K87N S147K",6
"lib1","SARS-CoV-2","GTTTTACCAGTATCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","L95M Y119* S139I",3
"lib1","SARS-CoV-2","GTTTTACTCAGACCTT",1,22.91,10.74,-0.02,0.08,2.94,1.05,0,"1 nonsynonymous","K198Y",1
"lib1","SARS-CoV-2","GTTTTACTGTGACCAA",13,165.16,10.76,0,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTTAGAAGGAAACA",2,38.29,8.36,-2.4,0.16,2.02,1.11,0.01,">1 nonsynonymous","F62V Y119R R136C P169T",4
"lib1","SARS-CoV-2","GTTTTAGACCAACAGG",13,158.79,10.65,-0.12,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTTAGAGTGTGGAC",10,154.1,10.75,-0.01,0.05,2.94,1.04,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","GTTTTAGCATTCATGA",2,36.31,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A33E R78T G83R V103C Y175N E186G",6
"lib1","SARS-CoV-2","GTTTTAGTTGATGAAG",1,16.56,10.62,-0.14,0.05,2.91,1,0,">1 nonsynonymous","Q144S P149V Q163L",3
"lib1","SARS-CoV-2","GTTTTATAATGTTAAC",3,47.89,8.67,-2.09,0.18,1.53,1.13,0.01,">1 nonsynonymous","N13C Y35K",2
"lib1","SARS-CoV-2","GTTTTATAATTCGAGG",1,54.32,10.82,0.06,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTTATCAAGATGAA",3,15.27,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3R Y35S P96K T201R",4
"lib1","SARS-CoV-2","GTTTTATGCGATGAGT",1,28.85,10.55,-0.21,0.06,2.87,1.03,0,">1 nonsynonymous","I2S G116S",2
"lib1","SARS-CoV-2","GTTTTATTCCCACGTT",1,36.91,7.75,-3.02,0.32,1.5,1.14,0.03,">1 nonsynonymous","N58I R136G K198R",3
"lib1","SARS-CoV-2","GTTTTATTTATGCCAT",4,0.61,NA,NA,NA,NA,NA,NA,"stop","G83* T100I N110I K132V",4
"lib1","SARS-CoV-2","GTTTTCACATGTGAAC",6,23.62,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","T3I L60R S69M F99N",4
"lib1","SARS-CoV-2","GTTTTCACCAGCCAAG",8,73.68,10.52,-0.25,0.07,2.91,1.05,0,">1 nonsynonymous","L5D S41I",2
"lib1","SARS-CoV-2","GTTTTCACCTAACAAT",2,4.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","GTTTTCAGCCGGTGTC",5,0.51,NA,NA,NA,NA,NA,NA,"stop","I2W S41T K87* A105E",4
"lib1","SARS-CoV-2","GTTTTCCACCCCATCT",9,115,10.69,-0.08,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTTCCAGAACCATA",2,19.25,10.2,-0.56,0.16,2.65,1.11,0.01,">1 nonsynonymous","S41T C61M",2
"lib1","SARS-CoV-2","GTTTTCCATACTAAAG",4,73.61,10.76,0,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","GTTTTCCCAAGGAATC",1,8.55,10.77,0,0.12,2.65,1,0,">1 nonsynonymous","E10A Y123L",2
"lib1","SARS-CoV-2","GTTTTCGATCCTATAT",7,43.66,6.48,-4.28,0.72,1.5,1.2,0.03,">1 nonsynonymous","Q84T A89H A105Y G116R",4
"lib1","SARS-CoV-2","GTTTTCGCGCTAACCA",1,28.36,10.71,-0.05,0.07,2.79,1.05,0,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","GTTTTCTATATAGGAC",3,27.47,9.52,-1.24,0.16,1.82,1.13,0.01,"1 nonsynonymous","L162Q",1
"lib1","SARS-CoV-2","GTTTTCTGAGCATAAG",3,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H Y50L G146L",3
"lib1","SARS-CoV-2","GTTTTCTGAGCCAAGC",4,21.47,6,-4.76,1.24,3,1.16,0,">1 nonsynonymous","V20K R27S V37L",3
"lib1","SARS-CoV-2","GTTTTCTTACCTGAAA",10,1200.57,9.32,-1.45,0.11,1.77,1.08,0.01,">1 nonsynonymous","F8S V37G N120G",3
"lib1","SARS-CoV-2","GTTTTCTTCTAAGACT",8,144.05,9.41,-1.36,0.1,1.85,1.1,0,">1 nonsynonymous","I28Q P54V",2
"lib1","SARS-CoV-2","GTTTTGACAGAAAAAA",2,9.09,10.35,-0.42,0.08,2.87,1.17,0,">1 nonsynonymous","S19P R27S",2
"lib1","SARS-CoV-2","GTTTTGACGTGACAGA",5,25.27,9.31,-1.46,0.08,2.87,1.04,0,">1 nonsynonymous","A42S G166Q A192V",3
"lib1","SARS-CoV-2","GTTTTGACTACTATCG",1,25.06,10.25,-0.51,0.2,2.6,1,0.02,">1 nonsynonymous","I2S F99L",2
"lib1","SARS-CoV-2","GTTTTGAGATACATGA",2,74.31,10.72,-0.05,0.05,2.92,1.04,0,"1 nonsynonymous","Q163W",1
"lib1","SARS-CoV-2","GTTTTGCGCTAGTCGA",6,116.81,9.69,-1.07,0.11,1.94,1.07,0,">1 nonsynonymous","N1G C6G S41T Y178N",4
"lib1","SARS-CoV-2","GTTTTGGATCCTAATA",14,259.87,10.49,-0.28,0.03,2.88,1.06,0,">1 nonsynonymous","L95M N110R",2
"lib1","SARS-CoV-2","GTTTTGGATGATTTGT",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E V32R I88W P96R P191S",5
"lib1","SARS-CoV-2","GTTTTGGCCCCGGCCA",3,31.05,9.23,-1.53,0.11,2.63,1.24,0.01,">1 nonsynonymous","D59A N120T",2
"lib1","SARS-CoV-2","GTTTTGGTTAAAAAAC",5,70.18,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T85S K94I Y119E",3
"lib1","SARS-CoV-2","GTTTTGGTTTCAAGCA",6,11.52,6,-4.76,2,2.63,1.17,0,">1 nonsynonymous","D34Y Y93S",2
"lib1","SARS-CoV-2","GTTTTGTAAGTAAACC",8,19.93,6.7,-4.06,0.39,1.5,1.11,0.02,">1 nonsynonymous","V65E F99Q",2
"lib1","SARS-CoV-2","GTTTTGTATCAATCCT",1,149.92,6.09,-4.68,0.75,1.5,1.22,0.01,">1 nonsynonymous","Y121Q F160L Y175D",3
"lib1","SARS-CoV-2","GTTTTGTGCATAGGAA",1,7.31,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8P G117D T140Q V182I",4
"lib1","SARS-CoV-2","GTTTTTAACAATTCTG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","Y35G T63C K87F C102S W106V K128M S184T K198*",8
"lib1","SARS-CoV-2","GTTTTTAATCACCTGT",6,8.5,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","E10P N30E W106P S139I G155A",5
"lib1","SARS-CoV-2","GTTTTTAATGACAGTA",4,56.57,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11G I28F Y50I S147C G155F",5
"lib1","SARS-CoV-2","GTTTTTAGACGAATAA",5,65.02,10.8,0.04,0.05,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","GTTTTTAGACTTATAC",8,108.94,6,-4.76,2,3,1.2,0,">1 nonsynonymous","G51W N92Y W106R G155I",4
"lib1","SARS-CoV-2","GTTTTTAGATTTGAAC",2,18.86,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7T T46Q C61V A89M P96W F99G N171D",7
"lib1","SARS-CoV-2","GTTTTTATGCTGATGT",2,7.78,6,-4.76,2,1.5,1.15,0.08,">1 nonsynonymous","N13I S43T A89H T148A",4
"lib1","SARS-CoV-2","GTTTTTATTAGAATCA",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V D59Q W106P G146R",4
"lib1","SARS-CoV-2","GTTTTTATTTAAGATA",2,60.88,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y35V K56T P82S L95D Y121T",5
"lib1","SARS-CoV-2","GTTTTTCACAAGGGGA",3,46.93,10.59,-0.17,0.06,2.85,1.11,0,">1 nonsynonymous","I28L A81S",2
"lib1","SARS-CoV-2","GTTTTTCACCACTTGA",2,57.63,10.14,-0.63,0.06,2.8,1.02,0,">1 nonsynonymous","F44L K56I",2
"lib1","SARS-CoV-2","GTTTTTCCAAACAGAT",1,32.01,6.34,-4.42,0.56,1.5,1.21,0.02,">1 nonsynonymous","A18T I88F F185L",3
"lib1","SARS-CoV-2","GTTTTTCCGCTCGTGC",2,36.8,10.7,-0.07,0.04,2.93,1.04,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","GTTTTTCCTCCAAAAA",4,19.04,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K56H N64H V77G T85L E154K",5
"lib1","SARS-CoV-2","GTTTTTCGCGAATATT",6,29.6,7.53,-3.24,0.28,1.5,1.16,0.04,">1 nonsynonymous","Y21G R136V T201S",3
"lib1","SARS-CoV-2","GTTTTTCTAGATGTGA",2,52.33,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2V G83Q Y123V R136F G155T",5
"lib1","SARS-CoV-2","GTTTTTGAAGAAACAC",2,45.09,10.09,-0.68,0.08,2.63,1.02,0,">1 nonsynonymous","G9C E141P",2
"lib1","SARS-CoV-2","GTTTTTGAGAGAAATT",3,46.2,10.64,-0.13,0.07,2.86,1.04,0,">1 nonsynonymous","S41R T140M",2
"lib1","SARS-CoV-2","GTTTTTGAGGCAACCG",1,23.74,10.66,-0.11,0.06,2.92,1.04,0,"1 nonsynonymous","Q163R",1
"lib1","SARS-CoV-2","GTTTTTGGATAATCTT",4,59.84,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F8L D34I V71W",3
"lib1","SARS-CoV-2","GTTTTTTACTAGCGAA",3,31.35,10.57,-0.19,0.07,2.85,1.09,0,"1 nonsynonymous","G152A",1
"lib1","SARS-CoV-2","GTTTTTTAGAAGACCA",13,122.68,6.08,-4.68,0.7,1.5,1.2,0.01,">1 nonsynonymous","A14F C158N",2
"lib1","SARS-CoV-2","GTTTTTTAGGCTTGGC",3,0.17,NA,NA,NA,NA,NA,NA,"stop","L5T C31P I138V S200*",4
"lib1","SARS-CoV-2","GTTTTTTCCTATTCTC",2,18.56,9.39,-1.37,0.27,2,1.07,0.03,">1 nonsynonymous","G51V T170N",2
"lib1","SARS-CoV-2","GTTTTTTGCTGTACGT",2,0.84,NA,NA,NA,NA,NA,NA,"stop","T63* K199M",2
"lib1","SARS-CoV-2","GTTTTTTTCAAAATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L A33L S41Y K87A A192G",5
"lib1","SARS-CoV-2","GTTTTTTTTCCGTAAA",1,36.49,6,-4.76,0.85,3,1.22,0,">1 nonsynonymous","R25V P96S R136Y",3
"lib1","SARS-CoV-2","GTTTTTTTTGTAAAAC",1,29.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E141G C158I G166I",3
"lib1","SARS-CoV-2","TAAAAAAAAAAACAAA",2,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C V103S N157K",3
"lib1","SARS-CoV-2","TAAAAAAAAAATCATA",2,29.33,10.54,-0.22,0.06,2.83,1.09,0,"1 nonsynonymous","F44G",1
"lib1","SARS-CoV-2","TAAAAAAAAACCTCAA",2,5.36,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","A22R S41L K87R N120G A145R Y165V G172S",7
"lib1","SARS-CoV-2","TAAAAAAAAATTCCTA",6,143.88,10.43,-0.34,0.06,2.78,1.06,0,">1 nonsynonymous","S29G V37S S129F F160S",4
"lib1","SARS-CoV-2","TAAAAAAAACAAAGAA",7,18.6,6,-4.76,2,3,1.21,0,">1 nonsynonymous","T63K W106M L122W S139P G152M L162T",6
"lib1","SARS-CoV-2","TAAAAAAAACGGTACC",10,219.87,10.72,-0.04,0.05,2.9,1.05,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TAAAAAAAAGAGGCCA",6,99.02,10.12,-0.65,0.08,2.34,1.01,0,">1 nonsynonymous","V37P V77T",2
"lib1","SARS-CoV-2","TAAAAAAAAGGTAAAA",11,202.21,10.29,-0.47,0.04,2.88,1.05,0,">1 nonsynonymous","K48T G174Q",2
"lib1","SARS-CoV-2","TAAAAAAAATATAGCC",2,113.84,10.09,-0.68,0.07,2.18,1.04,0,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","TAAAAAAAATATCGAC",10,118.03,10.43,-0.34,0.05,2.9,1.03,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","TAAAAAAAATCCTACA",6,129.68,10.51,-0.26,0.04,2.89,1.04,0,"1 nonsynonymous","S164L",1
"lib1","SARS-CoV-2","TAAAAAAACAGAAGTT",1,46.11,10.77,0,0.04,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAAAAACAGCATTT",2,60.89,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N92L N107T",2
"lib1","SARS-CoV-2","TAAAAAAACCCCAATT",4,44.51,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44I D68K G116S R127N G152H C158I T201G",7
"lib1","SARS-CoV-2","TAAAAAAACTTGTACA",5,42.62,7.65,-3.12,0.4,1.5,1,0.07,">1 nonsynonymous","A18W T63M N107P G117V",4
"lib1","SARS-CoV-2","TAAAAAAAGAACATTC",2,79.81,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I28L Y35A G174Y R179D",4
"lib1","SARS-CoV-2","TAAAAAAAGATCCCGA",1,12.04,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","E10Q G101V P149M G155S V180D",5
"lib1","SARS-CoV-2","TAAAAAAAGCACTCAG",2,52.16,10.05,-0.71,0.11,2.55,1.02,0.01,">1 nonsynonymous","V37G F62G V77I",3
"lib1","SARS-CoV-2","TAAAAAAAGCATCTAA",3,121.95,10.48,-0.29,0.04,2.93,1.04,0,">1 nonsynonymous","W106Q N130K",2
"lib1","SARS-CoV-2","TAAAAAAAGCTGCGAA",3,64.69,10.08,-0.69,0.05,2.74,1,0,">1 nonsynonymous","F62V A105M S164A",3
"lib1","SARS-CoV-2","TAAAAAAATAAGGACA",6,25.15,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","G101S N157S",2
"lib1","SARS-CoV-2","TAAAAAAATATGAAAA",2,20.54,10.51,-0.25,0.16,2.89,1.09,0.01,"1 nonsynonymous","T3V",1
"lib1","SARS-CoV-2","TAAAAAAATCATTGTG",2,31.71,10.45,-0.32,0.08,2.82,1.16,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","TAAAAAAATCCATCTT",4,33.44,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V52L F70L D75V A81S N107V G152D K199H",7
"lib1","SARS-CoV-2","TAAAAAAATGAGGCGG",1,7.31,7.74,-3.02,0.4,1.5,1.04,0.06,">1 nonsynonymous","T3Y N13F F17A V37G",4
"lib1","SARS-CoV-2","TAAAAAAATGCCTGAT",2,36.66,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I104M N118R T170I Y175C",4
"lib1","SARS-CoV-2","TAAAAAAATGTGCAGA",6,118.06,10.16,-0.61,0.05,2.85,1,0,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","TAAAAAAATTAATGAT",11,84.11,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N24T S41V V77R I80F",4
"lib1","SARS-CoV-2","TAAAAAAATTACCCCT",4,102.49,10.69,-0.07,0.05,2.94,1.03,0,"1 nonsynonymous","E186N",1
"lib1","SARS-CoV-2","TAAAAAAATTCTGCAT",4,82.58,9.68,-1.08,0.05,2.85,1.06,0,">1 nonsynonymous","T55Y P169C",2
"lib1","SARS-CoV-2","TAAAAAAATTTCTTTG",2,30.94,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","K26G T100C S113V D137S F167W V180M",6
"lib1","SARS-CoV-2","TAAAAAACACAGGAAA",1,16,9.5,-1.26,0.18,1.52,1.11,0.02,">1 nonsynonymous","K48R Y91D L111D",3
"lib1","SARS-CoV-2","TAAAAAACATACTCCG",5,45.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N92I N107L I138L C158L",4
"lib1","SARS-CoV-2","TAAAAAACCATGATAC",1,24.29,10.26,-0.5,0.17,2.4,1,0.01,">1 nonsynonymous","D98W N107R L122K T201R",4
"lib1","SARS-CoV-2","TAAAAAACCCAAAACT",4,31.49,10.25,-0.51,0.06,2.87,1.05,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","TAAAAAACGGAGCGGT",3,350.2,10.19,-0.58,0.08,2.63,1,0,">1 nonsynonymous","T3I T100E",2
"lib1","SARS-CoV-2","TAAAAAACTAAACGGT",3,39.99,10.12,-0.65,0.06,2.88,1.02,0,"1 nonsynonymous","R73T",1
"lib1","SARS-CoV-2","TAAAAAACTAAAGTAG",7,190.23,10.54,-0.23,0.04,2.91,1.06,0,">1 nonsynonymous","L5T E141P",2
"lib1","SARS-CoV-2","TAAAAAACTACTACAA",7,119.22,10.21,-0.56,0.07,2.73,1.06,0,">1 nonsynonymous","F44K L162I",2
"lib1","SARS-CoV-2","TAAAAAACTCAAATCA",6,28.72,9.19,-1.57,0.25,1.58,1.15,0.03,">1 nonsynonymous","D90H T100D",2
"lib1","SARS-CoV-2","TAAAAAAGACATCTCT",4,22.28,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","C61Q G83V A105R H189A",4
"lib1","SARS-CoV-2","TAAAAAAGACTTGATA",7,102.87,10.51,-0.25,0.05,2.96,1,0,">1 nonsynonymous","I2N A42L K87R",3
"lib1","SARS-CoV-2","TAAAAAAGAGCGACTT",1,1.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","TAAAAAAGATTGTCCG",4,20.36,6.04,-4.72,1.12,1.5,1.17,0.02,">1 nonsynonymous","I28G V103H Y143P",3
"lib1","SARS-CoV-2","TAAAAAAGCTGTGGCA",5,30.91,10.54,-0.22,0.06,2.89,1.06,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","TAAAAAAGTAAAAACC",3,88.53,9.72,-1.05,0.14,2.04,1.09,0.01,">1 nonsynonymous","G9A Y50T",2
"lib1","SARS-CoV-2","TAAAAAAGTAAGGACT",2,70.31,10.82,0.05,0.07,2.89,1.06,0,"1 nonsynonymous","K199V",1
"lib1","SARS-CoV-2","TAAAAAAGTCTGACAA",5,107.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F17T Y39R F44Y F99N P161L",5
"lib1","SARS-CoV-2","TAAAAAAGTTACACTT",3,68.31,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9S Y91R N107Q P177H T201N",5
"lib1","SARS-CoV-2","TAAAAAATAACTGCGG",10,67.66,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7F T63P D90F L122C Q144M",5
"lib1","SARS-CoV-2","TAAAAAATAACTTCAA",1,12.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A22L G86H Y91P T170R",4
"lib1","SARS-CoV-2","TAAAAAATACACCGAG",5,82.19,8.98,-1.78,0.16,2.45,1.21,0.01,">1 nonsynonymous","Y91N N120T",2
"lib1","SARS-CoV-2","TAAAAAATAGCCCTAA",13,92.98,6.26,-4.5,0.38,1.5,1.13,0.01,">1 nonsynonymous","P7L V37L F47Y D112R",4
"lib1","SARS-CoV-2","TAAAAAATCTTTATTG",4,130.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39L Y159S",2
"lib1","SARS-CoV-2","TAAAAAATGAACTGCT",1,5.7,7.99,-2.77,0.33,2.59,1.29,0.01,">1 nonsynonymous","V37I K94D",2
"lib1","SARS-CoV-2","TAAAAAATGACACTTC",3,29.66,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G86W F160P",2
"lib1","SARS-CoV-2","TAAAAAATGACCGGTG",3,100.74,6.3,-4.46,0.64,1.5,1.19,0.02,">1 nonsynonymous","I2Y L131A Q176E K198G",4
"lib1","SARS-CoV-2","TAAAAAATGCCAGAGT",5,55.33,10.68,-0.09,0.03,2.92,1.04,0,">1 nonsynonymous","S139G P149D",2
"lib1","SARS-CoV-2","TAAAAAATGGGTTCAG",2,42.16,10.76,0,0.13,2.79,1.08,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TAAAAAATGTGGATTA",1,26.79,10.74,-0.03,0.05,2.92,1.04,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","TAAAAAATTAATAGTG",1,17.06,6,-4.76,1.2,3,1.17,0.01,">1 nonsynonymous","D68R Y91K P177K",3
"lib1","SARS-CoV-2","TAAAAAATTAGCAGAA",1,13.59,10.81,0.05,0.04,2.96,1.04,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","TAAAAAATTTAATTAC",9,32.16,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T55L V77A Y93R",3
"lib1","SARS-CoV-2","TAAAAAATTTTGCAAA",2,3.82,NA,NA,NA,NA,NA,NA,"stop","T46K G83P Y119* P197C",4
"lib1","SARS-CoV-2","TAAAAACAAAACATAA",1,56.24,10.72,-0.04,0.06,2.96,1.03,0,"1 nonsynonymous","S41W",1
"lib1","SARS-CoV-2","TAAAAACAAATATCCG",1,26.89,6.4,-4.36,0.43,1.5,1.07,0.01,">1 nonsynonymous","F12T N64E A105Q C158I",4
"lib1","SARS-CoV-2","TAAAAACAAGACTTGA",3,52.44,6,-4.76,2,2.91,1.15,0,">1 nonsynonymous","K56R G86R L122T N151D",4
"lib1","SARS-CoV-2","TAAAAACAAGTTCAAG",1,19.98,10.49,-0.27,0.06,2.9,1.07,0,"1 nonsynonymous","K48H",1
"lib1","SARS-CoV-2","TAAAAACAAGTTTAAC",3,2.93,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAAAAACAATAAGGTT",3,18.24,6.07,-4.7,0.57,1.68,1.14,0.01,">1 nonsynonymous","N24F A33N T55N K94Y K128T",5
"lib1","SARS-CoV-2","TAAAAACAATTCTAAC",5,32.53,6,-4.76,1.59,1.5,1.15,0.01,"1 nonsynonymous","V181G",1
"lib1","SARS-CoV-2","TAAAAACACAATTCAA",9,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N C49K V103C S113D G152D",5
"lib1","SARS-CoV-2","TAAAAACACCTAGCAT",3,83.01,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9S C61K K94Y C158K",4
"lib1","SARS-CoV-2","TAAAAACAGACACAGT",3,38.72,10.52,-0.25,0.07,2.98,1,0,">1 nonsynonymous","K132Y P149S",2
"lib1","SARS-CoV-2","TAAAAACAGATAAAAG",4,28.45,9.62,-1.15,0.13,2.45,1.16,0.01,">1 nonsynonymous","F12V C61T G174R",3
"lib1","SARS-CoV-2","TAAAAACAGGATAATC",4,30.46,6,-4.76,1.1,3,1.11,0,">1 nonsynonymous","C49S T140R C150W",3
"lib1","SARS-CoV-2","TAAAAACAGTTCGATC",6,214.68,9.88,-0.88,0.07,2.51,1.03,0,">1 nonsynonymous","S129L Y178V",2
"lib1","SARS-CoV-2","TAAAAACATCCACCGA",2,55.43,9.21,-1.55,0.2,1.73,1.2,0.02,">1 nonsynonymous","S36T E154C V180M P191R",4
"lib1","SARS-CoV-2","TAAAAACATGTACACT",3,36.16,8.64,-2.13,0.18,1.5,1.04,0.02,">1 nonsynonymous","K94G F185L",2
"lib1","SARS-CoV-2","TAAAAACATTTCAACG",1,43.51,10.78,0.01,0.1,2.91,1.03,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","TAAAAACCAATAATCA",1,32.68,10.75,-0.01,0.18,2.84,1,0.01,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","TAAAAACCACAATTAA",4,62.45,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","D90H D112G K132T Y159S F167H",5
"lib1","SARS-CoV-2","TAAAAACCACCTCATC",1,32.59,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A105Q Y121L Y159S",3
"lib1","SARS-CoV-2","TAAAAACCCACGAAAA",4,44.98,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","E10N Y39L P82Y P96Y G116F",5
"lib1","SARS-CoV-2","TAAAAACCCTCAACGG",1,39.6,10.64,-0.13,0.05,2.94,1.02,0,">1 nonsynonymous","T63R F156P",2
"lib1","SARS-CoV-2","TAAAAACCGCGTATAC",4,1.64,NA,NA,NA,NA,NA,NA,"stop","K87P N120* F126M G146V",4
"lib1","SARS-CoV-2","TAAAAACCGTTTTAAA",3,64.31,6,-4.76,1.11,1.51,1.15,0.01,">1 nonsynonymous","S108P E154K P197W",3
"lib1","SARS-CoV-2","TAAAAACCTAATGGAC",1,7.52,6.06,-4.71,0.52,3,1.03,0.01,">1 nonsynonymous","F12Y G101N",2
"lib1","SARS-CoV-2","TAAAAACGAATACGTA",3,35.2,9.06,-1.7,0.13,2.16,1.01,0.01,">1 nonsynonymous","S36A G83T I142W",3
"lib1","SARS-CoV-2","TAAAAACGACAAACGT",2,14.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V71E F160S V181L K199N",4
"lib1","SARS-CoV-2","TAAAAACGTTAAACAC",2,23.63,10.58,-0.18,0.1,2.84,1.06,0,">1 nonsynonymous","Y121Q L188R",2
"lib1","SARS-CoV-2","TAAAAACTACTAACCA",4,45.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F47L T55L N92K",3
"lib1","SARS-CoV-2","TAAAAACTACTTCACG",4,146.94,10.76,-0.01,0.05,2.89,1.06,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","TAAAAACTAGATAGAG",18,245.31,10.13,-0.63,0.06,2.7,1.03,0,">1 nonsynonymous","P7M D59W",2
"lib1","SARS-CoV-2","TAAAAACTAGTAAAAA",4,10.15,10.19,-0.57,0.4,1.5,1,0.06,">1 nonsynonymous","R27K F99T",2
"lib1","SARS-CoV-2","TAAAAACTATGGGAAA",1,1.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","TAAAAACTCCAACGGA",1,13.54,9.66,-1.11,0.19,2.31,1.21,0.02,">1 nonsynonymous","V11I K56P E141I",3
"lib1","SARS-CoV-2","TAAAAACTGGATAGAC",1,24.92,6.81,-3.95,0.4,1.5,1.04,0.05,">1 nonsynonymous","V103H R136G Y143K",3
"lib1","SARS-CoV-2","TAAAAACTGTTTGCCA",1,70.9,10.37,-0.39,0.09,2.92,1,0,">1 nonsynonymous","I2V S139L S164P T201Y",4
"lib1","SARS-CoV-2","TAAAAACTTAAACTCA",5,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H L60Q V103G",3
"lib1","SARS-CoV-2","TAAAAACTTCAACAGG",3,12.99,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F47S S69W Q84R F99E N171F K198Q",6
"lib1","SARS-CoV-2","TAAAAAGAAACATACG",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136T V173G S200T",3
"lib1","SARS-CoV-2","TAAAAAGAAACTGCTA",1,58.86,10.8,0.03,0.09,2.88,1.07,0,">1 nonsynonymous","Y91F L122T",2
"lib1","SARS-CoV-2","TAAAAAGAATAAAAGA",6,48.03,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S29F S41R R127G G166R",4
"lib1","SARS-CoV-2","TAAAAAGAATCAGTTA",7,89.92,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K48A D59I C102Y",3
"lib1","SARS-CoV-2","TAAAAAGAATCGCTAA",2,35.3,6.34,-4.43,0.59,1.5,1.09,0.02,">1 nonsynonymous","I80S P197L",2
"lib1","SARS-CoV-2","TAAAAAGAATTGAATA",3,35.36,6.76,-4.01,0.42,1.5,1.14,0.03,">1 nonsynonymous","L5T G74C Y143I",3
"lib1","SARS-CoV-2","TAAAAAGACAAACGTA",8,66.7,8.34,-2.42,0.19,1.5,1.09,0.01,">1 nonsynonymous","G86C L122W Q168S",3
"lib1","SARS-CoV-2","TAAAAAGACAAATATG",4,35.83,9.98,-0.78,0.15,2.11,1,0.01,">1 nonsynonymous","A33C S139M P149R",3
"lib1","SARS-CoV-2","TAAAAAGACACTCGGT",4,65.91,6.11,-4.66,1.02,1.5,1.23,0.03,"1 nonsynonymous","I80T",1
"lib1","SARS-CoV-2","TAAAAAGACCGCGGGT",2,25.46,10.74,-0.03,0.07,2.96,1,0,"1 nonsynonymous","L162I",1
"lib1","SARS-CoV-2","TAAAAAGACGAGTCAC",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P R179S",2
"lib1","SARS-CoV-2","TAAAAAGACTCTAGAT",6,24.9,10.74,-0.03,0.08,2.91,1.05,0,"1 nonsynonymous","T3V",1
"lib1","SARS-CoV-2","TAAAAAGACTGTAAGG",3,24.72,8.36,-2.41,0.19,1.97,1.09,0.01,"1 nonsynonymous","D112Y",1
"lib1","SARS-CoV-2","TAAAAAGATGCATTCG",10,72.49,10.75,-0.02,0.07,2.93,1.05,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","TAAAAAGCAGATAATA",1,27.82,10.56,-0.21,0.08,2.9,1.1,0,">1 nonsynonymous","L38V I104L L122G",3
"lib1","SARS-CoV-2","TAAAAAGCCCTTAAAT",3,21.49,10.77,0,0.06,2.92,1.03,0,">1 nonsynonymous","V37Q I88V T140S",3
"lib1","SARS-CoV-2","TAAAAAGGCGTGAGTA",8,0.54,NA,NA,NA,NA,NA,NA,"stop","F44S L60S K114*",3
"lib1","SARS-CoV-2","TAAAAAGTCACCCCCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TAAAAAGTCAGGATAT",4,19.21,10.5,-0.26,0.14,2.81,1.05,0.01,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TAAAAAGTGAGATAAA",4,17.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K V52Q",2
"lib1","SARS-CoV-2","TAAAAAGTGCAAAACT",3,0.5,NA,NA,NA,NA,NA,NA,"stop","S69* Y91*",2
"lib1","SARS-CoV-2","TAAAAAGTTAGTACAT",11,59.98,6,-4.76,2,1.83,1.18,0.01,">1 nonsynonymous","Q79R T100L K114Y A145V F167R",5
"lib1","SARS-CoV-2","TAAAAAGTTGACCTAC",4,24.83,9.06,-1.71,0.17,1.83,1.13,0.01,">1 nonsynonymous","C6S S45V",2
"lib1","SARS-CoV-2","TAAAAATAAATAGCAC",3,17.87,8.04,-2.73,0.47,1.5,1.06,0.08,">1 nonsynonymous","V11D C61K K87S W106C",4
"lib1","SARS-CoV-2","TAAAAATAAATGTAAA",7,103.15,10.85,0.09,0.05,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAAATAACCAATGG",3,88.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K56L G172V T201G",3
"lib1","SARS-CoV-2","TAAAAATAACTCTAGT",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M G83D N92W",3
"lib1","SARS-CoV-2","TAAAAATAAGATTTTT",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N L95E Y165A A190S",4
"lib1","SARS-CoV-2","TAAAAATAAGGGTTAA",7,0.21,NA,NA,NA,NA,NA,NA,"stop","D97* N120P L131C",3
"lib1","SARS-CoV-2","TAAAAATACGTTAATT",2,5.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6N F99N G172S S184Y",4
"lib1","SARS-CoV-2","TAAAAATACTGAAACT",7,32.55,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N40L D68M V103A N107I K132T",5
"lib1","SARS-CoV-2","TAAAAATAGATAAAAG",3,51.29,9.97,-0.79,0.08,2.53,1.09,0,">1 nonsynonymous","I28G P197M",2
"lib1","SARS-CoV-2","TAAAAATAGATAGTGT",10,122.67,10.62,-0.15,0.04,2.9,1.02,0,">1 nonsynonymous","L5M F185L",2
"lib1","SARS-CoV-2","TAAAAATAGATGACAT",2,0.87,NA,NA,NA,NA,NA,NA,"stop","Y91* G101*",2
"lib1","SARS-CoV-2","TAAAAATAGGGAAATA",5,0.16,NA,NA,NA,NA,NA,NA,"stop","L5S N13F S69* I88V Y119T V181D",6
"lib1","SARS-CoV-2","TAAAAATAGTGAATAT",1,14.01,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V32F G101L Q176K",3
"lib1","SARS-CoV-2","TAAAAATCAATATACG",1,7.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122V K132Q T140N L162A",4
"lib1","SARS-CoV-2","TAAAAATCATCCATAA",2,63.84,10.62,-0.14,0.06,2.85,1.07,0,">1 nonsynonymous","P54V D90L",2
"lib1","SARS-CoV-2","TAAAAATCATTACCGG",1,7.52,7.49,-3.27,0.47,1.5,1.06,0.03,">1 nonsynonymous","D68W D97I D112I I142L",4
"lib1","SARS-CoV-2","TAAAAATCCAAACGAG",6,1.94,NA,NA,NA,NA,NA,NA,"stop","F47* V115G T140D",3
"lib1","SARS-CoV-2","TAAAAATCCTGCTAAA",1,9.5,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F17M L38S I104G C150I",4
"lib1","SARS-CoV-2","TAAAAATCGAGTCACG",5,26.52,8.49,-2.27,0.3,1.5,1.11,0.03,">1 nonsynonymous","F99V I138H",2
"lib1","SARS-CoV-2","TAAAAATCTAAAACAT",1,6.5,6.69,-4.08,1.44,1.5,1.16,0.03,">1 nonsynonymous","G9E D90Q V181S K198Q",4
"lib1","SARS-CoV-2","TAAAAATCTACGATAA",4,10.21,10.97,0.21,0.09,2.96,1,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","TAAAAATCTACTGAAT",1,41.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44Y N107Y N157F",3
"lib1","SARS-CoV-2","TAAAAATCTATGGGTT",4,64.63,9.56,-1.21,0.1,2.1,1.07,0,">1 nonsynonymous","C6H S45Y",2
"lib1","SARS-CoV-2","TAAAAATGAAACCGGG",1,25.47,10.68,-0.08,0.07,2.98,1.01,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","TAAAAATGAAGATCTA",3,40.73,9.71,-1.06,0.06,2.08,1.02,0,">1 nonsynonymous","A14F K48Q",2
"lib1","SARS-CoV-2","TAAAAATGACATCAGT",1,52.67,10.6,-0.16,0.08,2.86,1.09,0,"1 nonsynonymous","A42Q",1
"lib1","SARS-CoV-2","TAAAAATGACGAAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4F K56I P82* A89T T170N K199M",6
"lib1","SARS-CoV-2","TAAAAATGAGGATAAA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146C Y165V",2
"lib1","SARS-CoV-2","TAAAAATGATAACGTA",2,0.95,NA,NA,NA,NA,NA,NA,"stop","S45T P54Q P191D K199*",4
"lib1","SARS-CoV-2","TAAAAATGATCCAATC",3,28.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W106Y G117D V180L",3
"lib1","SARS-CoV-2","TAAAAATGCCTGGGTA",1,9.79,8.56,-2.2,0.31,3,1.07,0.04,">1 nonsynonymous","Y119D Q168I",2
"lib1","SARS-CoV-2","TAAAAATGCGGATCCG",10,4.3,NA,NA,NA,NA,NA,NA,"stop","I88V S113Q Y121I K132*",4
"lib1","SARS-CoV-2","TAAAAATGGACCTGCA",3,30.02,10.67,-0.09,0.06,2.93,1.05,0,"1 nonsynonymous","K114E",1
"lib1","SARS-CoV-2","TAAAAATGTAAAGTAC",4,1.32,NA,NA,NA,NA,NA,NA,"stop","S19M Y50K L131* G152H",4
"lib1","SARS-CoV-2","TAAAAATTAAAATGGT",3,95.12,10.79,0.03,0.05,2.89,1.05,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","TAAAAATTAATAGTCG",3,89.17,10.87,0.11,0.11,2.88,1.06,0,">1 nonsynonymous","L5Y V37F P54R E141Y",4
"lib1","SARS-CoV-2","TAAAAATTACACTATT",2,6.36,6,-4.76,2,1.5,1.06,0.04,">1 nonsynonymous","D112L F156L F167I",3
"lib1","SARS-CoV-2","TAAAAATTAGGGTTAG",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R C49R D90R P96L F126H",5
"lib1","SARS-CoV-2","TAAAAATTGAAAGTCT",3,64.72,9.27,-1.49,0.09,2.52,1.13,0,">1 nonsynonymous","Y121H Q176M",2
"lib1","SARS-CoV-2","TAAAAATTGATATATA",2,50.85,6,-4.76,2,3,1.16,0,"1 nonsynonymous","F99R",1
"lib1","SARS-CoV-2","TAAAAATTTCCACGCA",9,64.39,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A33S L60A I88M K128V",4
"lib1","SARS-CoV-2","TAAAACAAAACAGGCG",2,25.39,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F99T Y165M",2
"lib1","SARS-CoV-2","TAAAACAAAACTGCTG",6,55.65,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N64Y A81T L95F V180P",4
"lib1","SARS-CoV-2","TAAAACAAAAGAAGTC",1,15.4,9.79,-0.97,0.16,2,1.07,0.01,">1 nonsynonymous","F44D C102I",2
"lib1","SARS-CoV-2","TAAAACAAAATCTTCC",6,104.56,10.4,-0.36,0.04,2.93,1.03,0,"1 nonsynonymous","E154D",1
"lib1","SARS-CoV-2","TAAAACAAACCAACGA",2,32.43,9.65,-1.12,0.17,1.77,1.18,0.01,">1 nonsynonymous","L5Y S69G",2
"lib1","SARS-CoV-2","TAAAACAAACCCGGTA",4,3.82,NA,NA,NA,NA,NA,NA,"stop","N110* K199P",2
"lib1","SARS-CoV-2","TAAAACAAGACACAAG",1,5.98,11.02,0.26,0.12,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAACAATGGGCACC",7,60.69,8.63,-2.13,0.11,2.86,1.03,0,">1 nonsynonymous","C31L Y119Q V153S",3
"lib1","SARS-CoV-2","TAAAACACACGGACCT",2,117.83,6.87,-3.89,0.28,1.5,1.13,0.01,">1 nonsynonymous","Y143T P177A",2
"lib1","SARS-CoV-2","TAAAACACCCCTAATT",1,0.46,NA,NA,NA,NA,NA,NA,"stop","N120* T201G",2
"lib1","SARS-CoV-2","TAAAACACCGAAGTAT",2,0.76,NA,NA,NA,NA,NA,NA,"stop","I104E I138*",2
"lib1","SARS-CoV-2","TAAAACACGCCAGGTG",3,23.14,8.53,-2.23,0.26,1.5,1.1,0.04,">1 nonsynonymous","K94L E141F",2
"lib1","SARS-CoV-2","TAAAACAGAACTTTCA",3,1.9,NA,NA,NA,NA,NA,NA,"stop","E10R L131*",2
"lib1","SARS-CoV-2","TAAAACAGAAGATGGG",5,33.44,6,-4.76,1.28,1.5,1.16,0.01,">1 nonsynonymous","E10M C61S D97E F99S E141I T201M",6
"lib1","SARS-CoV-2","TAAAACAGCCGGGACT",4,54.21,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V103P L131D",2
"lib1","SARS-CoV-2","TAAAACAGCGAACCTT",4,1.37,NA,NA,NA,NA,NA,NA,"stop","A42* L57Y",2
"lib1","SARS-CoV-2","TAAAACAGCTGCACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L A33F S45D A89C P149A T201L",6
"lib1","SARS-CoV-2","TAAAACAGTAATCGTG",12,28.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49Y V103L",2
"lib1","SARS-CoV-2","TAAAACAGTACTGCAG",3,25.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R27H G101H T201N",3
"lib1","SARS-CoV-2","TAAAACAGTTACCGAG",7,42.97,10.03,-0.74,0.07,2.56,1,0,">1 nonsynonymous","I2W G9T S108C S200I",4
"lib1","SARS-CoV-2","TAAAACATAAAGACAT",4,83.97,10.67,-0.1,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAACATAGTTATAT",5,29.59,10.59,-0.17,0.06,2.89,1.1,0,">1 nonsynonymous","I2T T63M",2
"lib1","SARS-CoV-2","TAAAACATCAGACGCG",2,9.64,8.59,-2.18,0.36,1.88,1.06,0.05,">1 nonsynonymous","T3P K56P K87Y S129T T148G G152S G166S",7
"lib1","SARS-CoV-2","TAAAACATCTTAAATC",8,3.55,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TAAAACATGAAAGAAC",2,35.18,9.43,-1.34,0.11,1.69,1.08,0.01,">1 nonsynonymous","G51V N64I G83K",3
"lib1","SARS-CoV-2","TAAAACATGAAATATT",2,16.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N30T Y91S D97Q G172S",4
"lib1","SARS-CoV-2","TAAAACATGAGCCATT",2,9.96,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","N13K R25S T46C Y119I",4
"lib1","SARS-CoV-2","TAAAACATGGGCGTCA",3,53.66,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I28E I88T Q176T",3
"lib1","SARS-CoV-2","TAAAACATTATCGGTA",1,10.55,6,-4.76,2,1.5,1.1,0.05,">1 nonsynonymous","S45W L57S V71P D90L C102F",5
"lib1","SARS-CoV-2","TAAAACATTCAATTGT",1,26.66,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","G86S K94Y D112M E141H F160M H189N",6
"lib1","SARS-CoV-2","TAAAACCAATAAAAAC",4,34.06,10.41,-0.35,0.07,2.88,1.08,0,">1 nonsynonymous","K56L K87T",2
"lib1","SARS-CoV-2","TAAAACCACAGACAAA",3,77.99,8.57,-2.2,0.34,1.5,1,0.04,">1 nonsynonymous","T3L D98S Y178E",3
"lib1","SARS-CoV-2","TAAAACCACGAGAGTA",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y S129L",2
"lib1","SARS-CoV-2","TAAAACCAGAACACAG",3,21.56,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T46A I72K D112I",3
"lib1","SARS-CoV-2","TAAAACCAGCTAACGA",5,183.36,10.18,-0.59,0.03,2.82,1.03,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","TAAAACCAGTCTCATT",7,48.38,6.15,-4.62,0.84,1.5,1.17,0.02,">1 nonsynonymous","Y35L V103K A145G",3
"lib1","SARS-CoV-2","TAAAACCAGTGAAACA",1,6.06,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","P7R D34H S43G F99T I104L K198Q",6
"lib1","SARS-CoV-2","TAAAACCATATAAAAA",6,112.56,10.26,-0.51,0.06,2.82,1,0,"1 nonsynonymous","V180M",1
"lib1","SARS-CoV-2","TAAAACCATTCTTAAT",4,19.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59P A81R S113M",3
"lib1","SARS-CoV-2","TAAAACCCTCAAACCT",1,23.1,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V52S L122Y C150A",3
"lib1","SARS-CoV-2","TAAAACCCTCCATCGA",8,112.31,10.46,-0.3,0.06,2.86,1.09,0,">1 nonsynonymous","G9S T15S T63S L122A I138G",5
"lib1","SARS-CoV-2","TAAAACCCTTCACAAG",1,19.19,10.71,-0.05,0.06,3,1,0,">1 nonsynonymous","T15D L122V",2
"lib1","SARS-CoV-2","TAAAACCGAAAATACA",4,17.05,10.35,-0.42,0.15,2.71,1.1,0.01,">1 nonsynonymous","N40F T63R",2
"lib1","SARS-CoV-2","TAAAACCGAACTGAAA",9,24.38,6.07,-4.69,0.85,1.5,1.2,0.01,">1 nonsynonymous","A105K A145N",2
"lib1","SARS-CoV-2","TAAAACCGACTATTGA",5,26.68,10.32,-0.44,0.04,2.85,1.03,0,">1 nonsynonymous","N30Y K48I",2
"lib1","SARS-CoV-2","TAAAACCGAGAAAAGT",1,19.01,6.97,-3.8,0.47,1.61,1.01,0.05,">1 nonsynonymous","Y165S L183H",2
"lib1","SARS-CoV-2","TAAAACCGCTATAAAA",11,134.98,9.6,-1.17,0.04,2.92,1.05,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","TAAAACCGCTATAACG",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V K94A",2
"lib1","SARS-CoV-2","TAAAACCGGCCGTATA",4,82.94,8.31,-2.46,0.24,1.5,1.08,0.02,">1 nonsynonymous","R25V F44W",2
"lib1","SARS-CoV-2","TAAAACCTCAGTAAAT",1,24.21,7.77,-3,0.49,1.5,1,0.08,">1 nonsynonymous","I2E S36I N92Q",3
"lib1","SARS-CoV-2","TAAAACCTCTTAGTTT",6,75.92,6.34,-4.42,0.53,1.5,1.15,0.02,">1 nonsynonymous","V11K N24Y Y39R N64I Q84R G152D T170M",7
"lib1","SARS-CoV-2","TAAAACCTGAGTGCGT",2,20.18,9.12,-1.64,0.14,2.76,1.13,0.01,">1 nonsynonymous","S43I N157T T201Q",3
"lib1","SARS-CoV-2","TAAAACCTTAGTCACG",3,72.99,10.05,-0.72,0.12,2.43,1.01,0.01,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","TAAAACCTTCGAGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9I A33* S41F A105F Y121E S164Y G174* T201I",8
"lib1","SARS-CoV-2","TAAAACGAAAATATAA",9,100.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9F L60A P133A G172M",4
"lib1","SARS-CoV-2","TAAAACGAATGGCTAA",9,119.24,8.58,-2.18,0.12,1.74,1.13,0.01,">1 nonsynonymous","F8A N118Q",2
"lib1","SARS-CoV-2","TAAAACGACGAATGGG",1,9.89,9.64,-1.12,0.16,1.83,1.07,0.01,">1 nonsynonymous","S53L L60Q D97N F134V",4
"lib1","SARS-CoV-2","TAAAACGATACAAAAT",9,206.49,10.76,-0.01,0.05,2.9,1.04,0,"1 nonsynonymous","V52I",1
"lib1","SARS-CoV-2","TAAAACGATTTCCACT",4,23.14,9.53,-1.24,0.17,1.95,1.14,0.01,">1 nonsynonymous","N107Q R127K P197A",3
"lib1","SARS-CoV-2","TAAAACGCAAAAGATA",7,27.56,8.78,-1.98,0.16,1.52,1.14,0.01,">1 nonsynonymous","D59T R127Q",2
"lib1","SARS-CoV-2","TAAAACGCAATCAACA",3,34.16,8.05,-2.72,0.29,1.5,1.15,0.03,">1 nonsynonymous","N4T Y123E K128F S147Y T201W",5
"lib1","SARS-CoV-2","TAAAACGCCGCAAATT",7,97.43,10.73,-0.03,0.08,2.91,1.07,0,"1 nonsynonymous","R136K",1
"lib1","SARS-CoV-2","TAAAACGCTCCATTCG",7,179.71,8.6,-2.16,0.09,2.91,1.06,0,">1 nonsynonymous","S36D N118T T170Y",3
"lib1","SARS-CoV-2","TAAAACGGATGGCCGT",3,71.33,6,-4.76,1.34,1.5,1.16,0.01,">1 nonsynonymous","D112K F134Y F167S",3
"lib1","SARS-CoV-2","TAAAACGGATTAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35L N58L Q84* F99V N130S V153L",6
"lib1","SARS-CoV-2","TAAAACGGCATCTTCC",1,44.84,10.12,-0.65,0.1,2.92,1,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","TAAAACGTATGAACTG",1,34.52,10.89,0.12,0.08,2.88,1.04,0,"1 nonsynonymous","A192H",1
"lib1","SARS-CoV-2","TAAAACGTCGCGGGCT",7,12.57,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N13D K26Q Y35S I88Q V103P L111I",6
"lib1","SARS-CoV-2","TAAAACGTGAAAGAGT",4,21.71,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G86E E135K Y159H P169Y",4
"lib1","SARS-CoV-2","TAAAACGTTAGCGACC",2,100.92,10.47,-0.3,0.04,2.88,1.02,0,">1 nonsynonymous","S43T D90Y",2
"lib1","SARS-CoV-2","TAAAACTAAAGTACCA",4,37.54,10.12,-0.65,0.04,2.92,1.02,0,">1 nonsynonymous","D75G V173C T201K",3
"lib1","SARS-CoV-2","TAAAACTAACGAAATT",2,6.32,9.97,-0.8,0.2,2.29,1,0.01,">1 nonsynonymous","N58D P161G",2
"lib1","SARS-CoV-2","TAAAACTACACAATAC",8,56.01,10.54,-0.23,0.06,2.85,1.12,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","TAAAACTACTGTATAC",4,36.8,9.92,-0.85,0.1,1.9,1.04,0,">1 nonsynonymous","R27G F44R",2
"lib1","SARS-CoV-2","TAAAACTACTTAATGA",2,50.06,8.68,-2.08,0.33,1.5,1,0.05,">1 nonsynonymous","Y35S V77A",2
"lib1","SARS-CoV-2","TAAAACTAGGAATAAA",8,79.49,8.6,-2.17,0.17,2.11,1.2,0.01,">1 nonsynonymous","E10L K56L T170C",3
"lib1","SARS-CoV-2","TAAAACTAGGTAATTT",1,5.48,10.68,-0.09,0.05,2.88,1.13,0,">1 nonsynonymous","A33T S41Y A89L",3
"lib1","SARS-CoV-2","TAAAACTATACGTGCC",1,18.96,6,-4.76,1.23,1.5,1.17,0.01,">1 nonsynonymous","N13V V37R E76I N157H P177G",5
"lib1","SARS-CoV-2","TAAAACTATACTGCAT",7,49.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V103Y G146A",2
"lib1","SARS-CoV-2","TAAAACTCAATAAGGC",6,174.04,10.62,-0.14,0.03,2.89,1.04,0,">1 nonsynonymous","Y91N S200Y",2
"lib1","SARS-CoV-2","TAAAACTCACACCATC",4,81,9.03,-1.73,0.15,2.05,1.07,0.01,">1 nonsynonymous","F12L K87W G152T",3
"lib1","SARS-CoV-2","TAAAACTGAAATCTAA",8,36.76,9.92,-0.84,0.1,2.07,1,0.01,">1 nonsynonymous","I2L G9D F185R",3
"lib1","SARS-CoV-2","TAAAACTGATATCTTG",8,175.63,10.13,-0.64,0.05,2.82,1.03,0,">1 nonsynonymous","L5P L38I A89V",3
"lib1","SARS-CoV-2","TAAAACTGCGGTTCCA",3,48.09,6.01,-4.76,0.83,1.5,1.16,0.01,">1 nonsynonymous","S36E T55C L95R W106M S113H Y119K T148S",7
"lib1","SARS-CoV-2","TAAAACTGTCGGTATA",4,5.72,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R25E C61Q Y91T P96L",4
"lib1","SARS-CoV-2","TAAAACTTGGCACTAG",1,6.05,7.69,-3.07,0.68,1.5,1.13,0.08,">1 nonsynonymous","F47Y A81Y",2
"lib1","SARS-CoV-2","TAAAACTTTGGCATTA",2,15.41,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","V32E G74C P96R S113R",4
"lib1","SARS-CoV-2","TAAAAGAAAAGTTAAG",11,67.77,10.74,-0.02,0.05,2.91,1.06,0,">1 nonsynonymous","V37I A145S",2
"lib1","SARS-CoV-2","TAAAAGAAACAACTAA",7,63.76,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A105D Y143D V153G Q176R",4
"lib1","SARS-CoV-2","TAAAAGAAAGAAATCG",4,83.83,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P7K N40Q L57A A89L Y121W S129K",6
"lib1","SARS-CoV-2","TAAAAGAAATTTCAAA",1,26.17,10.47,-0.29,0.05,2.95,1,0,">1 nonsynonymous","S45A D90R",2
"lib1","SARS-CoV-2","TAAAAGAACGATTTTC",3,59.27,10.69,-0.08,0.06,2.89,1.06,0,"1 nonsynonymous","S147Y",1
"lib1","SARS-CoV-2","TAAAAGAATAGACGAT",2,1.49,NA,NA,NA,NA,NA,NA,"stop","C6I Y21V L60S D90L T100*",5
"lib1","SARS-CoV-2","TAAAAGAATCACAATA",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T148P A190D",2
"lib1","SARS-CoV-2","TAAAAGAATGTAGAGA",2,33.87,6,-4.76,2,3,1.23,0,">1 nonsynonymous","I2N E10N I28L S45V G172R",5
"lib1","SARS-CoV-2","TAAAAGACAGATTACT",3,20.9,10.69,-0.07,0.06,2.91,1.05,0,"1 nonsynonymous","N120D",1
"lib1","SARS-CoV-2","TAAAAGACATAGATAA",6,2.1,NA,NA,NA,NA,NA,NA,"stop","D34S T55C V77* G117E",4
"lib1","SARS-CoV-2","TAAAAGACCAGTAGAG",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T A81R G101E K114R N151T",5
"lib1","SARS-CoV-2","TAAAAGACCCCATTGC",10,164.82,10.15,-0.61,0.04,2.88,1.03,0,">1 nonsynonymous","C6D Q144N P197Y",3
"lib1","SARS-CoV-2","TAAAAGACGAATAAGG",1,109.69,10.78,0.02,0.04,2.91,1.06,0,">1 nonsynonymous","T15S L188S",2
"lib1","SARS-CoV-2","TAAAAGACTAGCAATA",6,59.88,8.88,-1.88,0.16,1.57,1.1,0.01,">1 nonsynonymous","F44T L60R T85P",3
"lib1","SARS-CoV-2","TAAAAGACTATGCTTC",16,16.64,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","F12Y L183D",2
"lib1","SARS-CoV-2","TAAAAGACTATTAAAA",7,68.25,8.35,-2.41,0.15,1.68,1.12,0.01,">1 nonsynonymous","Y121K Y143I",2
"lib1","SARS-CoV-2","TAAAAGAGAACTAAAG",1,57.99,8.35,-2.41,0.2,1.93,1.09,0.02,">1 nonsynonymous","V11Y I104Y N110E Y119G",4
"lib1","SARS-CoV-2","TAAAAGAGAATATAAA",1,17.6,10.69,-0.07,0.09,2.86,1.09,0,">1 nonsynonymous","L122R R127A",2
"lib1","SARS-CoV-2","TAAAAGATAATCTACC",3,69.89,9.62,-1.14,0.05,2.83,1.09,0,">1 nonsynonymous","I28L Y35I G83R P169E",4
"lib1","SARS-CoV-2","TAAAAGATATCATACT",2,24.47,10.03,-0.73,0.17,1.66,1.03,0.02,">1 nonsynonymous","K56M V173T",2
"lib1","SARS-CoV-2","TAAAAGATGTAAACTC",4,0.08,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","TAAAAGATTAGGACGT",3,14.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1D F44I E76S G152K K199Q",5
"lib1","SARS-CoV-2","TAAAAGATTCACTAAC",3,25.62,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","P7Y N30R V103A",3
"lib1","SARS-CoV-2","TAAAAGATTTATCTCA",5,1.12,NA,NA,NA,NA,NA,NA,"stop","A33R S41T A89P F99*",4
"lib1","SARS-CoV-2","TAAAAGCAAAACCGGT",2,18.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y S29V F62D",3
"lib1","SARS-CoV-2","TAAAAGCAAACTCAAT",1,49.72,9.85,-0.92,0.11,2.23,1.06,0.01,">1 nonsynonymous","P7F F62N",2
"lib1","SARS-CoV-2","TAAAAGCAACAACTGC",6,4.03,NA,NA,NA,NA,NA,NA,"stop","S53* D112R T201S",3
"lib1","SARS-CoV-2","TAAAAGCAACATAACG",8,98.36,9.28,-1.49,0.17,1.73,1.17,0.01,">1 nonsynonymous","T3L C31M A81G",3
"lib1","SARS-CoV-2","TAAAAGCAATCTACAT",8,38.42,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I80R K87R L125R T148D",4
"lib1","SARS-CoV-2","TAAAAGCAATTGTAAG",6,74.66,10.79,0.03,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAAGCACAGATACG",13,116.28,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F62N G74F N107M L125S F167V",5
"lib1","SARS-CoV-2","TAAAAGCAGTAGTTAA",4,7.34,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14T D34F T63S K94I G174T",5
"lib1","SARS-CoV-2","TAAAAGCATATAATAA",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L V181K A190S",3
"lib1","SARS-CoV-2","TAAAAGCCAATATCAG",6,77.39,6,-4.76,1.75,1.5,1.17,0.01,">1 nonsynonymous","S113M Y123C F167R",3
"lib1","SARS-CoV-2","TAAAAGCCACTTCCAA",8,0.68,NA,NA,NA,NA,NA,NA,"stop","T15N D68R N110* Y119P Y178*",5
"lib1","SARS-CoV-2","TAAAAGCCAGAGATAT",2,18.81,10.2,-0.56,0.09,2.83,1.03,0,">1 nonsynonymous","E141H G155R",2
"lib1","SARS-CoV-2","TAAAAGCCTGGTGGAG",4,232.02,10.45,-0.31,0.04,2.87,1.06,0,"1 nonsynonymous","I142F",1
"lib1","SARS-CoV-2","TAAAAGCGAAACTCCA",2,16.46,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Y123F F167V",2
"lib1","SARS-CoV-2","TAAAAGCGAAGATTTA",2,52.5,10.9,0.14,0.1,2.84,1.05,0,">1 nonsynonymous","K56Q T201A",2
"lib1","SARS-CoV-2","TAAAAGCGGCTGACTT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","G9R V103G S113* I142*",4
"lib1","SARS-CoV-2","TAAAAGCTAGCTGCAA",1,35.27,8.37,-2.39,0.18,2.01,1.15,0.01,">1 nonsynonymous","L5N F44V N157T",3
"lib1","SARS-CoV-2","TAAAAGCTCTATGTCC",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A G51I",2
"lib1","SARS-CoV-2","TAAAAGCTGAACACAC",1,1.49,NA,NA,NA,NA,NA,NA,"stop","C6G L95N K128F K199*",4
"lib1","SARS-CoV-2","TAAAAGCTTAGTGACA",6,54.92,8.44,-2.32,0.14,2.34,1.09,0.01,">1 nonsynonymous","G152N P161N",2
"lib1","SARS-CoV-2","TAAAAGCTTATTAAAC",2,25.88,10.85,0.09,0.08,2.97,1,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TAAAAGGAACCTCTAT",1,34.63,8.69,-2.07,0.25,1.5,1.12,0.03,">1 nonsynonymous","S69V A145V",2
"lib1","SARS-CoV-2","TAAAAGGACAAATAAA",5,55.59,8.28,-2.48,0.13,1.77,1.12,0.01,">1 nonsynonymous","I28M N151R Y165S",3
"lib1","SARS-CoV-2","TAAAAGGACAACCACT",3,0.9,NA,NA,NA,NA,NA,NA,"stop","S19* G51Y N157T",3
"lib1","SARS-CoV-2","TAAAAGGAGCTACTTT",4,1.68,NA,NA,NA,NA,NA,NA,"stop","S45I K48* E76*",3
"lib1","SARS-CoV-2","TAAAAGGATTATCGTA",3,59.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A14I F44M A105V G116D Y143S C150I",6
"lib1","SARS-CoV-2","TAAAAGGCAAGAAAAG",1,0.7,NA,NA,NA,NA,NA,NA,"stop","D112Y N120R I142*",3
"lib1","SARS-CoV-2","TAAAAGGCACAAACGC",4,66.68,6,-4.76,1.99,1.5,1.19,0.01,">1 nonsynonymous","K114M L122R I138D L162G",4
"lib1","SARS-CoV-2","TAAAAGGCACAACGGG",4,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M L60T Q79I G86W N92F T201W",6
"lib1","SARS-CoV-2","TAAAAGGCACCCGCTG",2,54.53,9.93,-0.84,0.1,2.26,1.05,0,">1 nonsynonymous","E10H T100N P149M",3
"lib1","SARS-CoV-2","TAAAAGGCATGAACTA",1,31.57,10.49,-0.28,0.05,2.96,1,0,">1 nonsynonymous","F134L E141T",2
"lib1","SARS-CoV-2","TAAAAGGGGGTCGAAC",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T F70A E76L G196S",4
"lib1","SARS-CoV-2","TAAAAGGTACAAACCA",3,22.17,6.37,-4.39,0.77,1.5,1.23,0.04,">1 nonsynonymous","C49R N58S P82W F167R",4
"lib1","SARS-CoV-2","TAAAAGGTAGAATGTC",1,13.5,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G83P V103H",2
"lib1","SARS-CoV-2","TAAAAGGTCAAATACT",2,0,NA,NA,NA,NA,NA,NA,"stop","S53N N64* Y175V",3
"lib1","SARS-CoV-2","TAAAAGGTGGATAATT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","G9* Q79K G86* L95F G152L",5
"lib1","SARS-CoV-2","TAAAAGGTTCGTAACT",5,64.92,10.62,-0.14,0.03,2.95,1.02,0,"1 nonsynonymous","N120F",1
"lib1","SARS-CoV-2","TAAAAGGTTTTATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131Y T140Q F160T T170L",4
"lib1","SARS-CoV-2","TAAAAGTAGCACTAAT",4,71.62,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","P7K F44I F134I F167N",4
"lib1","SARS-CoV-2","TAAAAGTATACTGAGA",2,5.24,10.33,-0.43,0.08,3,1.01,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","TAAAAGTATAGCATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44M G51D Q84* F160* T201K",5
"lib1","SARS-CoV-2","TAAAAGTATCTAGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5V V32S S41M N64* G152C Y165N",6
"lib1","SARS-CoV-2","TAAAAGTCACCTTAAT",5,1.94,NA,NA,NA,NA,NA,NA,"stop","G51P R124* N171* G174P",4
"lib1","SARS-CoV-2","TAAAAGTCGGAGATAC",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K D137E",2
"lib1","SARS-CoV-2","TAAAAGTGGAAACAAA",2,8.59,6,-4.76,2,3,1.15,0.01,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","TAAAAGTGGACACCTT",7,44.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D68R F167T",2
"lib1","SARS-CoV-2","TAAAAGTTAACATAAT",3,59.94,11.06,0.3,0.06,2.97,1,0,"1 nonsynonymous","Q168H",1
"lib1","SARS-CoV-2","TAAAAGTTGCGAGTCA",3,22.49,6,-4.76,0.83,3,1.09,0.01,">1 nonsynonymous","C6S G101T",2
"lib1","SARS-CoV-2","TAAAATAAAACGGAAA",2,16.68,9.8,-0.96,0.06,2.92,1,0,">1 nonsynonymous","I2N Y119F",2
"lib1","SARS-CoV-2","TAAAATAAAACTTCCA",6,86.73,10.72,-0.05,0.09,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAATAAACTGTTGA",3,6.01,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","W23V P149S T201C",3
"lib1","SARS-CoV-2","TAAAATAAATAAAGCG",4,17.95,10.18,-0.58,0.19,2.47,1.04,0.02,">1 nonsynonymous","F134T P149R",2
"lib1","SARS-CoV-2","TAAAATAAATGATGCT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","G86S F167*",2
"lib1","SARS-CoV-2","TAAAATAACATACCGG",1,11.08,8.85,-1.91,0.11,2.73,1.18,0.01,">1 nonsynonymous","G117H P149L",2
"lib1","SARS-CoV-2","TAAAATAACGAGACAG",6,3.25,NA,NA,NA,NA,NA,NA,"stop","F12L T55I L131G I138W T148* P149T",6
"lib1","SARS-CoV-2","TAAAATAAGCATACAA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","N24S C49S F99E Y119D N130H C150*",6
"lib1","SARS-CoV-2","TAAAATAAGCTTTAAA",9,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R E135G I142N",3
"lib1","SARS-CoV-2","TAAAATAAGTATAGCG",6,88.04,10.65,-0.11,0.08,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAATAATTATTCCA",10,168.18,10.24,-0.52,0.05,2.72,1.05,0,">1 nonsynonymous","P7A F134C",2
"lib1","SARS-CoV-2","TAAAATACAAAAGCCT",2,13.36,10.67,-0.1,0.08,2.77,1.18,0.01,"1 nonsynonymous","P149H",1
"lib1","SARS-CoV-2","TAAAATACAATATTAC",3,57.34,10.89,0.13,0.05,2.9,1.05,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TAAAATACAGCGTATT",1,17.83,10,-0.76,0.15,2.16,1.06,0.01,">1 nonsynonymous","L60P D97R P149L S200V",4
"lib1","SARS-CoV-2","TAAAATACAGGGATAG",3,38.21,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28R Y50F N120I P149T V194A",5
"lib1","SARS-CoV-2","TAAAATACATATTAGA",2,5.95,10.73,-0.04,0.07,3,1,0,">1 nonsynonymous","P7L L122M",2
"lib1","SARS-CoV-2","TAAAATACCCTCCGCG",4,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V N118P L125Q Q176I",4
"lib1","SARS-CoV-2","TAAAATACCCTTTCTA",1,43.72,9.94,-0.82,0.18,1.82,1.07,0.01,">1 nonsynonymous","L57F Y123T",2
"lib1","SARS-CoV-2","TAAAATACCGGCGAAC",3,62.11,10.68,-0.09,0.03,2.92,1.02,0,"1 nonsynonymous","L60W",1
"lib1","SARS-CoV-2","TAAAATACGAACTGCG",12,237.75,10.76,0,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAATAGCATCTTGA",2,154.16,6,-4.76,1.5,1.5,1.15,0,">1 nonsynonymous","S19P S36I Q176I",3
"lib1","SARS-CoV-2","TAAAATAGGTCAGAAA",5,18.86,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","G83Y I88F L95R",3
"lib1","SARS-CoV-2","TAAAATAGTAGGGTCT",5,126.46,9.81,-0.96,0.11,2.32,1.05,0,">1 nonsynonymous","N4K G83T T148P",3
"lib1","SARS-CoV-2","TAAAATATAAAAATTT",1,47.65,8.28,-2.48,0.19,1.76,1.15,0.01,">1 nonsynonymous","R73P D97T Y121H",3
"lib1","SARS-CoV-2","TAAAATATAATCATCA",3,54.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N92W S139Y N151A",3
"lib1","SARS-CoV-2","TAAAATATACGCCAAT",8,58.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98Y I104H N151L",3
"lib1","SARS-CoV-2","TAAAATATACGGTGCT",3,12.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N30R P96E G117L E154S",4
"lib1","SARS-CoV-2","TAAAATATAGTGTTTA",10,57.72,10.67,-0.09,0.05,2.95,1.02,0,">1 nonsynonymous","V37Q D59M K114R",3
"lib1","SARS-CoV-2","TAAAATATATCATAGG",2,19.74,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F12L P82Q K94T W106E",4
"lib1","SARS-CoV-2","TAAAATATCACTGCAA",5,15.35,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6D N13H K94D W106N S139R",5
"lib1","SARS-CoV-2","TAAAATATCAGTACAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28C N107*",2
"lib1","SARS-CoV-2","TAAAATATCATACCTA",2,45.1,10.51,-0.26,0.05,2.91,1,0,">1 nonsynonymous","D59K S139T Q144N N151E",4
"lib1","SARS-CoV-2","TAAAATATCTGGTGAT",3,13.18,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K48M W106P N157M",3
"lib1","SARS-CoV-2","TAAAATATGCAAAGCA",5,44.06,10.36,-0.41,0.07,2.94,1.01,0,">1 nonsynonymous","I28C N110E",2
"lib1","SARS-CoV-2","TAAAATATTAAGTCCT",4,147.94,10.09,-0.68,0.04,2.92,1.02,0,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","TAAAATATTCAAGCCG",5,11.18,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","N1E W23L L57Y N171I",4
"lib1","SARS-CoV-2","TAAAATATTCATATAA",3,39.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y39S G74P F99L K198E",4
"lib1","SARS-CoV-2","TAAAATCAAGAGCGCT",1,26.25,9.78,-0.98,0.09,2.95,1.03,0,">1 nonsynonymous","P7S D97V Y123R S147L",4
"lib1","SARS-CoV-2","TAAAATCACCAAATAA",4,38.51,10.7,-0.07,0.08,2.88,1.05,0,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","TAAAATCACCACCCCA",2,97.04,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F8C L38F R73I Y121T E141R R179P",6
"lib1","SARS-CoV-2","TAAAATCAGAGGAGTG",1,16.18,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","L5K P54I C61I A89W S113L G196D T201E",7
"lib1","SARS-CoV-2","TAAAATCAGGAAATTG",2,7.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H N92T N107V R124W",4
"lib1","SARS-CoV-2","TAAAATCATATAGGTA",1,22.38,9.51,-1.25,0.14,2.4,1.09,0.01,">1 nonsynonymous","T46I S69A V153G",3
"lib1","SARS-CoV-2","TAAAATCATCTGACAA",7,6.51,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6T Y50R T55R I104N L122N",5
"lib1","SARS-CoV-2","TAAAATCCATCCTGGG",3,8.18,10.82,0.06,0.08,2.9,1.1,0,"1 nonsynonymous","F44W",1
"lib1","SARS-CoV-2","TAAAATCCATGCTATG",6,62.26,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","V11S F62S Y159P",3
"lib1","SARS-CoV-2","TAAAATCCCCCTGGCT",2,81.97,10.76,0,0.05,2.92,1.04,0,">1 nonsynonymous","Y35L N130T S200C",3
"lib1","SARS-CoV-2","TAAAATCCGCCTCTAC",2,20.41,7.15,-3.61,0.38,1.5,1.01,0.06,">1 nonsynonymous","A89R Y165R R179T",3
"lib1","SARS-CoV-2","TAAAATCCTGCCCAGT",2,46.4,10.04,-0.72,0.15,2.13,1.06,0.01,">1 nonsynonymous","Y91A S184K P197Q",3
"lib1","SARS-CoV-2","TAAAATCGAATGAGAT",2,0.42,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib1","SARS-CoV-2","TAAAATCGTATTTCAT",6,76.95,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11P N40F R136Y G172Y",4
"lib1","SARS-CoV-2","TAAAATCTACTACCGT",7,119.4,10.74,-0.03,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAATCTCGACCCAA",1,36.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1D Y119P R179N",3
"lib1","SARS-CoV-2","TAAAATCTTAATCACG",2,15.83,10.09,-0.67,0.17,1.93,1.09,0.01,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","TAAAATGAATCCTGTT",5,40.8,9.96,-0.8,0.09,2.39,1.01,0,">1 nonsynonymous","S36H K56P T63N",3
"lib1","SARS-CoV-2","TAAAATGAGCACAACC",8,113.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10A I28K Y119F L125P P149T T170C T201V",7
"lib1","SARS-CoV-2","TAAAATGAGGTTTCCC",6,74.11,8.16,-2.6,0.2,1.5,1.15,0.02,">1 nonsynonymous","D98S K128C P149Y F160L",4
"lib1","SARS-CoV-2","TAAAATGAGTAACGGT",6,82.57,8.38,-2.38,0.15,2,1.07,0.01,">1 nonsynonymous","K94V N157G S200F",3
"lib1","SARS-CoV-2","TAAAATGATCTATTAA",12,123.26,9.85,-0.91,0.08,2.14,1.06,0,"1 nonsynonymous","F17G",1
"lib1","SARS-CoV-2","TAAAATGCAAGAGTTA",2,16.89,9.85,-0.91,0.12,2.46,1,0,">1 nonsynonymous","S36M A81S A145T E154T",4
"lib1","SARS-CoV-2","TAAAATGGAAATTCAA",4,0.39,NA,NA,NA,NA,NA,NA,"stop","S19P K26* D59V N107Q",4
"lib1","SARS-CoV-2","TAAAATGGATTGATAG",5,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F G83H G116T",3
"lib1","SARS-CoV-2","TAAAATGGATTTCCTT",3,68.12,10.83,0.06,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAATGGCAAGCCAT",5,25.99,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T15C Y66C G117F",3
"lib1","SARS-CoV-2","TAAAATGGCTGCTTTA",2,18.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121V V182A",2
"lib1","SARS-CoV-2","TAAAATGGTTATCAGA",6,38.99,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","G101V",1
"lib1","SARS-CoV-2","TAAAATGTATAAGTAC",1,24.45,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T63V N109E R124Y K199Q",4
"lib1","SARS-CoV-2","TAAAATGTATTTTCCC",4,52.82,10.7,-0.06,0.04,2.97,1,0,"1 nonsynonymous","A192E",1
"lib1","SARS-CoV-2","TAAAATGTCAAACTGG",6,46.21,7.97,-2.79,0.2,1.51,1.18,0.01,">1 nonsynonymous","G9S S53F D75G A105S G116A S147P G155S",7
"lib1","SARS-CoV-2","TAAAATGTCTAAAACA",7,73.86,7.29,-3.47,0.18,2.09,1.19,0.01,">1 nonsynonymous","F126N G166V",2
"lib1","SARS-CoV-2","TAAAATGTGCGACACT",6,43.46,10.14,-0.62,0.09,2.62,1.04,0,">1 nonsynonymous","T55G K132L E186F",3
"lib1","SARS-CoV-2","TAAAATGTTAAACCTT",3,5.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N107Q C150K",2
"lib1","SARS-CoV-2","TAAAATGTTACACGAT",5,180.05,9.72,-1.05,0.1,2.15,1.03,0,">1 nonsynonymous","K48L Y91V",2
"lib1","SARS-CoV-2","TAAAATGTTCAAAGAG",1,5.37,9.65,-1.12,0.29,1.74,1.08,0.03,"1 nonsynonymous","N92A",1
"lib1","SARS-CoV-2","TAAAATTAATAATAGA",1,20.21,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","TAAAATTAATACTCCG",5,97.16,10.78,0.02,0.09,2.9,1.06,0,"1 nonsynonymous","T85R",1
"lib1","SARS-CoV-2","TAAAATTAATGTAGCC",4,0,NA,NA,NA,NA,NA,NA,"stop","P7H F44* P197L",3
"lib1","SARS-CoV-2","TAAAATTAATGTAGTA",2,19.81,10.02,-0.74,0.16,2.09,1.11,0.01,">1 nonsynonymous","C6G S41Y D97N N120Y",4
"lib1","SARS-CoV-2","TAAAATTAGATATATG",8,7.42,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1H N13S Y93M N107Q G174N",5
"lib1","SARS-CoV-2","TAAAATTAGCTGGTAC",5,66.52,10.41,-0.35,0.07,2.93,1.03,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","TAAAATTAGGATAGTA",1,8.75,10.74,-0.02,0.08,3,1.01,0,">1 nonsynonymous","A33W S139T",2
"lib1","SARS-CoV-2","TAAAATTATATGAACG",6,36.48,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","L5R Y39L G86C L95F G174D",5
"lib1","SARS-CoV-2","TAAAATTATCCCCCTT",2,30.51,6.11,-4.65,1.06,1.5,1.15,0.02,">1 nonsynonymous","T3S F8Y Q84G A89L K128M",5
"lib1","SARS-CoV-2","TAAAATTATTAACCAA",5,85.02,6,-4.76,0.58,1.5,1.15,0,">1 nonsynonymous","K48N F62S D68G L122R S139V H189D",6
"lib1","SARS-CoV-2","TAAAATTATTCACGCA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T G83P A89N A105L N120A F126A",6
"lib1","SARS-CoV-2","TAAAATTCAACGACTA",2,15.01,10.79,0.02,0.08,2.92,1.05,0,"1 nonsynonymous","T148V",1
"lib1","SARS-CoV-2","TAAAATTCAATTGTTA",5,882.14,9.87,-0.9,0.07,2.46,1.06,0,">1 nonsynonymous","C61T K94N V173C",3
"lib1","SARS-CoV-2","TAAAATTCATTGGTTT",2,23.26,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","G9L V65L R127H E141M",4
"lib1","SARS-CoV-2","TAAAATTCCACCACCC",2,33.7,6.25,-4.52,1,1.5,1.28,0.04,">1 nonsynonymous","F44N G86N F156I V173L",4
"lib1","SARS-CoV-2","TAAAATTCGAACAAAC",6,64.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100D L125K F134K",3
"lib1","SARS-CoV-2","TAAAATTCGAGATCAG",3,0.7,NA,NA,NA,NA,NA,NA,"stop","C61G D112* R127G",3
"lib1","SARS-CoV-2","TAAAATTCTACTCCAC",2,22.41,10.83,0.06,0.07,2.97,1,0,"1 nonsynonymous","V32F",1
"lib1","SARS-CoV-2","TAAAATTCTATCATGT",1,9.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43H K87G N120L R127T N151T",5
"lib1","SARS-CoV-2","TAAAATTGAACGCTTT",1,1.02,NA,NA,NA,NA,NA,NA,"stop","P54L D90A F156* T201L",4
"lib1","SARS-CoV-2","TAAAATTGAGTGGTCA",4,40.87,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","K94R S113M N157T",3
"lib1","SARS-CoV-2","TAAAATTGATGTGTCG",3,133.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I104T V153N Y159H Y175L",4
"lib1","SARS-CoV-2","TAAAATTGCAAACAAA",2,42.27,6,-4.76,2,3,1.05,0,">1 nonsynonymous","F8S C61V N107R L122V",4
"lib1","SARS-CoV-2","TAAAATTGGCCCCAAT",3,11.74,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","S36T C49Y F167P",3
"lib1","SARS-CoV-2","TAAAATTGTATTCATA",6,79.18,9.13,-1.64,0.08,1.74,1.1,0,">1 nonsynonymous","R127T T201K",2
"lib1","SARS-CoV-2","TAAAATTTCGAATTAG",5,23.2,6.16,-4.61,0.68,1.5,1.17,0.02,">1 nonsynonymous","S19V F160L T201N",3
"lib1","SARS-CoV-2","TAAAATTTCGACTACC",12,148.72,10.28,-0.48,0.03,2.94,1.02,0,">1 nonsynonymous","G9T F44H K87V",3
"lib1","SARS-CoV-2","TAAAATTTGAAAAGAC",3,55.82,10.8,0.04,0.08,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAATTTTAAATAAA",7,238.86,10.65,-0.12,0.04,2.91,1.04,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","TAAACAAAAAACAAAC",1,7.74,10.75,-0.01,0.06,3,1.02,0,">1 nonsynonymous","V11I G83A",2
"lib1","SARS-CoV-2","TAAACAAAAAACTTGG",6,0.26,NA,NA,NA,NA,NA,NA,"stop","K94C N107A T140H G152S Q176*",5
"lib1","SARS-CoV-2","TAAACAAAAACAGTAA",2,9.04,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","N13S K48H S108P",3
"lib1","SARS-CoV-2","TAAACAAAAGAGAACT",5,34.73,6,-4.76,2,1.66,1.17,0.01,">1 nonsynonymous","D75R A89I Q144V F156W G172W",5
"lib1","SARS-CoV-2","TAAACAAAAGTTGAAG",3,39.22,10.22,-0.54,0.13,2.54,1.01,0.01,">1 nonsynonymous","G51D S184G",2
"lib1","SARS-CoV-2","TAAACAAACAGTCTAC",10,102.37,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y39Q T63K Y159G",3
"lib1","SARS-CoV-2","TAAACAAACTAAACGG",1,11.22,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5S D137L N151H",3
"lib1","SARS-CoV-2","TAAACAAACTTTGGTA",3,8.29,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y50S I104P V115N",3
"lib1","SARS-CoV-2","TAAACAAAGGAACAAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P N107M S184V",3
"lib1","SARS-CoV-2","TAAACAAAGGAGTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12L C49K A81* G116A",4
"lib1","SARS-CoV-2","TAAACAAAGGTCCATC",4,30.05,10.77,0.01,0.04,2.98,1,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","TAAACAAAGTCATCCT",4,23.92,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V20W V173L",2
"lib1","SARS-CoV-2","TAAACAAATTTAACAG",3,35.58,10.85,0.09,0.07,2.91,1.03,0,">1 nonsynonymous","N4K T46Q",2
"lib1","SARS-CoV-2","TAAACAACAGTTGCCT",2,44.82,8.4,-2.37,0.14,2.07,1.1,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","TAAACAACATTAAGGA",4,0.5,NA,NA,NA,NA,NA,NA,"stop","S45H P96* K114R R127L Q176E",5
"lib1","SARS-CoV-2","TAAACAACCAAAAGAT",6,68.81,10.79,0.03,0.07,2.91,1.06,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TAAACAACCGTAATTA",5,55.23,10.48,-0.28,0.05,2.85,1.06,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","TAAACAACGGAATTAC",12,97.06,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S29V F62K S108W N118I",4
"lib1","SARS-CoV-2","TAAACAACTAATAGTG",7,6.97,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","G86L P96H P169I",3
"lib1","SARS-CoV-2","TAAACAACTAATTTAC",1,6.35,6.26,-4.5,0.76,1.5,1.1,0.03,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","TAAACAACTGCCGTTT",9,91.47,8.58,-2.19,0.43,1.5,1,0.07,">1 nonsynonymous","Y50N S113W Y123L",3
"lib1","SARS-CoV-2","TAAACAAGAAATCCCT",5,11.91,10.23,-0.54,0.11,2.48,1.33,0.01,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TAAACAAGATCCATCC",2,13.36,7.27,-3.5,0.4,1.5,1.2,0.04,">1 nonsynonymous","V37M P96V K128Y",3
"lib1","SARS-CoV-2","TAAACAAGTACCACTC",3,38.18,8.81,-1.96,0.14,2.28,1.07,0.01,">1 nonsynonymous","L38V N107Q V173H",3
"lib1","SARS-CoV-2","TAAACAAGTAGAGTGA",4,26.75,9.71,-1.05,0.1,2.2,1.06,0.01,">1 nonsynonymous","C61V Q163P",2
"lib1","SARS-CoV-2","TAAACAAGTGGATTAT",6,11.3,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C49E A89K V103R F167Y K198Q",5
"lib1","SARS-CoV-2","TAAACAATAAGCTTGC",6,125.37,9.92,-0.84,0.08,2.48,1,0,">1 nonsynonymous","T15N F62Q A192E T201M",4
"lib1","SARS-CoV-2","TAAACAATACCCCGAC",1,15.39,6.2,-4.56,0.72,3,1.26,0.02,">1 nonsynonymous","N13H I72F F99S Y119G R124S F160T",6
"lib1","SARS-CoV-2","TAAACAATCTGATTAG",3,0.29,NA,NA,NA,NA,NA,NA,"stop","T100Q F160* L183I",3
"lib1","SARS-CoV-2","TAAACAATGAAATTTA",1,37.2,9.46,-1.3,0.17,2.16,1.17,0.01,">1 nonsynonymous","L5Q S29H Y121F Q144Y",4
"lib1","SARS-CoV-2","TAAACAATGCCGCAGC",6,162.19,10.16,-0.61,0.07,2.66,1.02,0,"1 nonsynonymous","V52N",1
"lib1","SARS-CoV-2","TAAACAATGGTTGAGG",2,7.14,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","T3N K94T",2
"lib1","SARS-CoV-2","TAAACAATTAGTTGAC",2,31.93,6.65,-4.11,0.65,1.5,1.27,0.03,">1 nonsynonymous","Y35S D90P G116L G146P",4
"lib1","SARS-CoV-2","TAAACAATTATCATCG",1,22.51,6,-4.76,1.69,3,1.08,0.01,">1 nonsynonymous","V32L G86V T148I V173L",4
"lib1","SARS-CoV-2","TAAACAATTGTTAAAA",7,139.07,10.8,0.04,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACACAAACAGAGC",11,133.52,10.55,-0.21,0.03,2.91,1.05,0,">1 nonsynonymous","N120I Y178F S200P",3
"lib1","SARS-CoV-2","TAAACACACCGTAATC",3,74.52,9.88,-0.88,0.09,1.95,1.1,0,">1 nonsynonymous","A89Y S129H",2
"lib1","SARS-CoV-2","TAAACACACTTGTAAT",2,12.28,11.08,0.32,0.13,2.93,1,0.01,"1 nonsynonymous","K198P",1
"lib1","SARS-CoV-2","TAAACACATAGTAACA",5,112.07,9.68,-1.09,0.07,1.82,1.08,0,">1 nonsynonymous","L38P L187C",2
"lib1","SARS-CoV-2","TAAACACATGAGACCA",1,8.14,10.25,-0.52,0.21,2.39,1.09,0.02,">1 nonsynonymous","S69M G116P",2
"lib1","SARS-CoV-2","TAAACACCAAAAAGCA",1,25.74,9.46,-1.3,0.23,1.72,1.08,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","TAAACACCATCTTGGC",3,92.78,10.82,0.06,0.09,2.75,1.13,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","TAAACACCATGCAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1S A105V K114*",3
"lib1","SARS-CoV-2","TAAACACCTCGAAAAC",1,26.29,10.77,0.01,0.09,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACACCTTGGGTAC",2,23.65,10.72,-0.04,0.08,2.98,1,0,"1 nonsynonymous","A22N",1
"lib1","SARS-CoV-2","TAAACACGAAACATTC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib1","SARS-CoV-2","TAAACACGGAGGTCTG",1,42.49,9.34,-1.42,0.1,1.87,1.08,0,">1 nonsynonymous","N4W L38P",2
"lib1","SARS-CoV-2","TAAACACGTCTAGGAA",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R A105F S139R",3
"lib1","SARS-CoV-2","TAAACACTAAAAGGGT",3,81.35,6,-4.76,2,1.5,1.21,0.01,"1 nonsynonymous","Y159S",1
"lib1","SARS-CoV-2","TAAACACTAAATCTGC",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L S41Y T55S L131S P149K",5
"lib1","SARS-CoV-2","TAAACACTAACTCTCA",4,29.96,10.73,-0.04,0.08,2.89,1.07,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","TAAACACTACAATGTA",1,22.2,9.86,-0.91,0.05,2.94,1.04,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","TAAACACTATTACACC",1,80.15,10.37,-0.4,0.22,2.26,1,0.02,"1 nonsynonymous","K87G",1
"lib1","SARS-CoV-2","TAAACACTCGTAGATT",8,1.24,NA,NA,NA,NA,NA,NA,"stop","P133*",1
"lib1","SARS-CoV-2","TAAACACTCTGGGCAG",5,64.55,8.71,-2.06,0.24,1.5,1.04,0.02,">1 nonsynonymous","S53C A89H K94L L122T",4
"lib1","SARS-CoV-2","TAAACACTGAAACAGC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","I104* S147* Y159R V173I",4
"lib1","SARS-CoV-2","TAAACACTGCATGCAG",10,31.5,6.51,-4.26,0.45,1.5,1.08,0.03,">1 nonsynonymous","D34S Y121G",2
"lib1","SARS-CoV-2","TAAACACTGTACGGAG",3,56.53,8.45,-2.31,0.39,1.5,1,0.08,">1 nonsynonymous","P7R N40T F44S Y121S",4
"lib1","SARS-CoV-2","TAAACACTGTACTCCT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","P7F S41* K56T",3
"lib1","SARS-CoV-2","TAAACAGACGAATTAC",2,17.93,10.22,-0.55,0.06,2.95,1,0,"1 nonsynonymous","Y21M",1
"lib1","SARS-CoV-2","TAAACAGATATTGCGA",3,16.72,10.73,-0.04,0.13,2.88,1.06,0.01,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","TAAACAGCCTGTGGGT",2,9.55,7.23,-3.53,0.23,1.68,1.28,0.02,">1 nonsynonymous","C6S Q84S W106L",3
"lib1","SARS-CoV-2","TAAACAGCGCTTATAC",1,22.23,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A18M D97Y V103L P149A F167I",5
"lib1","SARS-CoV-2","TAAACAGCTATTACCT",3,195.26,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","T46I P177Q P197T",3
"lib1","SARS-CoV-2","TAAACAGGTTAACGAA",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N A14K G83N N92W D97F A145V G166F L183V",8
"lib1","SARS-CoV-2","TAAACAGTAATAAACA",5,53.96,6.3,-4.47,0.42,1.5,1.11,0.01,">1 nonsynonymous","R25L G83L D137L",3
"lib1","SARS-CoV-2","TAAACATAAACATTAA",1,92.29,10.76,-0.01,0.05,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAACATAAGCAAAAT",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21H P149N",2
"lib1","SARS-CoV-2","TAAACATACAAGATGT",10,62.06,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","A14E R27S T63W P96R Y178C",5
"lib1","SARS-CoV-2","TAAACATACGGACCGG",2,32.04,7.93,-2.83,0.3,1.5,1.18,0.04,">1 nonsynonymous","L60S D68M T201V",3
"lib1","SARS-CoV-2","TAAACATACTTGAACG",9,225.41,10.44,-0.33,0.03,2.92,1.03,0,">1 nonsynonymous","L187P P191F",2
"lib1","SARS-CoV-2","TAAACATAGATTAACC",4,28.16,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P54S D68Q V153H",3
"lib1","SARS-CoV-2","TAAACATATAATAATC",1,13.66,10.1,-0.67,0.16,2.04,1.07,0.01,">1 nonsynonymous","N64S A67G",2
"lib1","SARS-CoV-2","TAAACATCCACTTGAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F12A V37G L57F V115* N151R",5
"lib1","SARS-CoV-2","TAAACATCGCAGCACG",2,30.7,10.84,0.08,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACATGTATTGGTC",12,120.28,10.69,-0.07,0.07,2.86,1.09,0,"1 nonsynonymous","Y66V",1
"lib1","SARS-CoV-2","TAAACATGTCACTTTA",1,6.77,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","A22V Y50F Q144Y",3
"lib1","SARS-CoV-2","TAAACATTAGATTAAT",2,13.26,10.25,-0.51,0.1,2.79,1,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","TAAACATTCACCCATT",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A N40Y N58Y",3
"lib1","SARS-CoV-2","TAAACATTCATCATTA",3,19.88,10.03,-0.74,0.13,2.71,1,0.01,">1 nonsynonymous","S43T D90V",2
"lib1","SARS-CoV-2","TAAACATTGAACAAGT",2,3.24,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCAAAGAGTAAC",1,38.47,8.59,-2.17,0.2,1.65,1.17,0.02,"1 nonsynonymous","G86T",1
"lib1","SARS-CoV-2","TAAACCAAATACCGAA",5,94.75,10.77,0,0.07,2.9,1.06,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","TAAACCAAATTGGATT",2,40.37,8.28,-2.49,0.17,2.33,1.15,0.01,">1 nonsynonymous","F62W N107V Y119T",3
"lib1","SARS-CoV-2","TAAACCAACCATATAA",1,44.37,9.96,-0.81,0.07,2.52,1.04,0,">1 nonsynonymous","N13E F134S",2
"lib1","SARS-CoV-2","TAAACCAACCCTGATG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N64R Y66* L122S I142W",4
"lib1","SARS-CoV-2","TAAACCAAGAAAATAC",5,33.47,10.62,-0.14,0.03,2.89,1.06,0,">1 nonsynonymous","D98N S184L",2
"lib1","SARS-CoV-2","TAAACCAAGACAATTG",12,243.96,10.72,-0.04,0.05,2.91,1.06,0,">1 nonsynonymous","T63K K199W",2
"lib1","SARS-CoV-2","TAAACCAATACTAATA",1,22.82,10.66,-0.1,0.04,2.94,1.01,0,">1 nonsynonymous","L5P Y91L P149T",3
"lib1","SARS-CoV-2","TAAACCAATACTCCCC",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D K87W S129R P149M",4
"lib1","SARS-CoV-2","TAAACCAATTCCTTCC",2,44,7.96,-2.8,0.32,1.5,1,0.04,">1 nonsynonymous","G51W C61R E135C C195S",4
"lib1","SARS-CoV-2","TAAACCACAAATAAAA",7,147.14,10.73,-0.03,0.07,2.89,1.07,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","TAAACCACACATGCAA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","P7W K128*",2
"lib1","SARS-CoV-2","TAAACCACCACGCCCA",3,103.04,9.4,-1.37,0.19,1.67,1.13,0.01,">1 nonsynonymous","E10Y R27G",2
"lib1","SARS-CoV-2","TAAACCACCGATACCA",3,31.55,8.38,-2.38,0.25,1.5,1.14,0.02,">1 nonsynonymous","R27A P96T E141Y",3
"lib1","SARS-CoV-2","TAAACCACGTGGAAAG",5,87.93,10.7,-0.07,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCACTAAACCGC",3,39.69,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","S36M G86F",2
"lib1","SARS-CoV-2","TAAACCAGAAAGATCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G F70P G83S D90L",4
"lib1","SARS-CoV-2","TAAACCAGACAGGATC",3,55.77,10.73,-0.04,0.09,2.85,1.11,0,"1 nonsynonymous","L122F",1
"lib1","SARS-CoV-2","TAAACCAGCGACCGTA",2,32.15,10.73,-0.04,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCAGGAAACGAT",2,96.45,8.1,-2.67,0.2,1.5,1.11,0.02,">1 nonsynonymous","N4C A14V N64V S113T",4
"lib1","SARS-CoV-2","TAAACCAGGGTACCCA",1,42.98,10.66,-0.1,0.05,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCAGGTTTCAAA",3,8.77,10.18,-0.59,0.11,2.77,1.01,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","TAAACCAGTACCCAGC",7,40.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14Y N58V P133H",3
"lib1","SARS-CoV-2","TAAACCATAATTTTCC",12,127.6,10.4,-0.36,0.05,2.81,1.05,0,"1 nonsynonymous","P96D",1
"lib1","SARS-CoV-2","TAAACCATACCCAAAA",1,36.43,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","G101M V173S",2
"lib1","SARS-CoV-2","TAAACCATATATATTT",2,9.75,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","F70A Y123S A190T",3
"lib1","SARS-CoV-2","TAAACCATATTTAATG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib1","SARS-CoV-2","TAAACCATCTGTAAAT",3,15.6,10.29,-0.47,0.06,2.95,1.01,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","TAAACCATGATACAAT",1,54.3,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","N107H I142L E154Y K199N",4
"lib1","SARS-CoV-2","TAAACCATTGACATAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","P7F V52*",2
"lib1","SARS-CoV-2","TAAACCCAACATGACC",6,65.14,10.35,-0.42,0.04,2.94,1.02,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","TAAACCCAATCATTTA",4,178.1,9.49,-1.27,0.1,2.58,1.1,0,">1 nonsynonymous","L57V K87G T201V",3
"lib1","SARS-CoV-2","TAAACCCACACGCGAC",2,38.22,10.74,-0.02,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCCACTGCCACG",9,10.29,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","N13V E76N A81V",3
"lib1","SARS-CoV-2","TAAACCCAGACTCACC",5,99.25,9.57,-1.2,0.11,1.98,1.05,0,">1 nonsynonymous","T3S K94L",2
"lib1","SARS-CoV-2","TAAACCCATTCGATTA",6,80.58,10.77,0.01,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCCCAAAACCAT",5,78.54,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L5S V32S S41H Y91G L131F S147D",6
"lib1","SARS-CoV-2","TAAACCCCGATTAAAG",1,0.43,NA,NA,NA,NA,NA,NA,"stop","C31F S41I P133* Q176R",4
"lib1","SARS-CoV-2","TAAACCCCGCCTTTTG",2,13.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A105C D112L K128H S147P",4
"lib1","SARS-CoV-2","TAAACCCTAACGTAGT",11,455.51,8.61,-2.16,0.09,1.94,1.12,0,">1 nonsynonymous","G152D Q176R",2
"lib1","SARS-CoV-2","TAAACCCTAGCCAGCA",9,9.64,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T15E D59S D97W N130R R179P",5
"lib1","SARS-CoV-2","TAAACCCTGTCTAAAC",2,70.24,10.24,-0.53,0.05,2.84,1.04,0,">1 nonsynonymous","S29T G152I T201I",3
"lib1","SARS-CoV-2","TAAACCGAAATCCTGT",1,27.94,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","P96C V103R N107R A145L Q176R",5
"lib1","SARS-CoV-2","TAAACCGATGATAACA",6,35.5,8.29,-2.48,0.13,2.16,1.03,0.01,">1 nonsynonymous","R73P I142F",2
"lib1","SARS-CoV-2","TAAACCGATGCTTGAA",3,79.01,8.33,-2.43,0.24,1.5,1.09,0.02,">1 nonsynonymous","S69M N110Y Q168K",3
"lib1","SARS-CoV-2","TAAACCGATTGCATGA",2,51.99,10.29,-0.48,0.08,2.84,1.06,0,">1 nonsynonymous","F44P V153I",2
"lib1","SARS-CoV-2","TAAACCGCCTTACGTT",3,8.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7N S41L D90P V115H S147F T201M",6
"lib1","SARS-CoV-2","TAAACCGCGCCCTAAG",9,111.35,9.13,-1.63,0.11,1.9,1.15,0,">1 nonsynonymous","C31G K132V S139G T201P",4
"lib1","SARS-CoV-2","TAAACCGCTCGATATT",2,7.09,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","T15A T46C P161Y T170R G174L",5
"lib1","SARS-CoV-2","TAAACCGGTGATGAAC",3,14.73,10.05,-0.71,0.12,2.5,1.08,0.01,">1 nonsynonymous","D98F G116V",2
"lib1","SARS-CoV-2","TAAACCGGTGGTATAA",6,72.97,7.08,-3.68,0.33,1.5,1.06,0.02,">1 nonsynonymous","A81D F156M P169W",3
"lib1","SARS-CoV-2","TAAACCGTCCAAATAT",2,26.28,10.14,-0.62,0.09,2.8,1,0,">1 nonsynonymous","T85M E141S P149I K198L",4
"lib1","SARS-CoV-2","TAAACCGTTATGACTT",4,27.42,10.72,-0.04,0.07,2.83,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACCGTTGACAATC",2,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E Y175E",2
"lib1","SARS-CoV-2","TAAACCTAAGACGCAG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","S41G S69E G86K P96Y Y165*",5
"lib1","SARS-CoV-2","TAAACCTAATAATAAT",1,8,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C6T S53V K87G T140S P149F",5
"lib1","SARS-CoV-2","TAAACCTAATGAGTAC",2,20.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13M E135R C150Y Y165P",4
"lib1","SARS-CoV-2","TAAACCTATAGATCAA",3,41.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R25L V37T N64R D90N T170F",5
"lib1","SARS-CoV-2","TAAACCTATGACGCCG",3,40.99,8.88,-1.88,0.18,2.2,1.23,0.02,">1 nonsynonymous","L38R K87N",2
"lib1","SARS-CoV-2","TAAACCTATGCCGTTA",4,87.93,9.83,-0.93,0.12,2.15,1.05,0.01,">1 nonsynonymous","Y50H N120I",2
"lib1","SARS-CoV-2","TAAACCTATTACTATA",7,86.28,10.41,-0.35,0.05,2.87,1.02,0,">1 nonsynonymous","A14V I138V",2
"lib1","SARS-CoV-2","TAAACCTATTAGCATG",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E S41R G155R",3
"lib1","SARS-CoV-2","TAAACCTCAATCTAAC",12,214.72,9.09,-1.68,0.06,2.78,1.08,0,">1 nonsynonymous","N109K Y119L P149L F160Y",4
"lib1","SARS-CoV-2","TAAACCTCACTGACCC",4,19.56,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","L57T D98S R124P S129D I138K",5
"lib1","SARS-CoV-2","TAAACCTCGATGTCTA",4,25.05,9.31,-1.46,0.26,1.5,1.03,0.05,">1 nonsynonymous","K56P T85A W106S",3
"lib1","SARS-CoV-2","TAAACCTCGTTATCGC",1,40.11,10.23,-0.53,0.15,2.21,1.18,0.01,"1 nonsynonymous","F8E",1
"lib1","SARS-CoV-2","TAAACCTGCCTATGTC",4,17.37,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N30S V52K I88S I104D F167W",5
"lib1","SARS-CoV-2","TAAACCTTATTCAATA",1,44.42,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","E76G D97T S129A P149G P169V",5
"lib1","SARS-CoV-2","TAAACCTTTCCTAGAT",5,51.23,10.75,-0.02,0.1,2.91,1.01,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","TAAACCTTTGCCTACC",1,10.07,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A22T G101V E141R",3
"lib1","SARS-CoV-2","TAAACGAAATAGAACG",4,32.86,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","W23V G166D",2
"lib1","SARS-CoV-2","TAAACGAAATTGAAAA",2,34.12,6,-4.76,2,1.5,1.3,0.02,">1 nonsynonymous","L95Q T201L",2
"lib1","SARS-CoV-2","TAAACGAACAGGGACC",5,52.17,6,-4.76,2,2.21,1.21,0.01,">1 nonsynonymous","F62N I72R T85K Y93N F134P",5
"lib1","SARS-CoV-2","TAAACGAACGACATTG",4,25.07,9.35,-1.42,0.1,2.73,1.08,0,">1 nonsynonymous","D98T S113T",2
"lib1","SARS-CoV-2","TAAACGAATACCGAGA",2,19.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9C S41Q T100P I104V R136N",5
"lib1","SARS-CoV-2","TAAACGACAAAACCAC",6,42.12,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","V37K P82I L122V Q163D Y175A",5
"lib1","SARS-CoV-2","TAAACGACAAGACGAG",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R D112H",2
"lib1","SARS-CoV-2","TAAACGACAGGCTGAA",3,52.29,10.06,-0.71,0.08,2.77,1.06,0,">1 nonsynonymous","K26L D98T G174M",3
"lib1","SARS-CoV-2","TAAACGACCCAGACTG",3,17.21,7.3,-3.46,0.46,1.5,1.12,0.05,">1 nonsynonymous","T15F G101Q G117E Y165H Q176R",5
"lib1","SARS-CoV-2","TAAACGACTATGCTAA",8,2.57,NA,NA,NA,NA,NA,NA,"stop","N13T P54* Y143M T201N",4
"lib1","SARS-CoV-2","TAAACGAGGATGGATT",2,49.16,10.41,-0.35,0.05,2.89,1.02,0,">1 nonsynonymous","N40F S147E",2
"lib1","SARS-CoV-2","TAAACGAGGGATGTCT",1,11.04,10.42,-0.34,0.15,2.97,1.07,0.01,">1 nonsynonymous","T85V L122R S139T V173D T201V",5
"lib1","SARS-CoV-2","TAAACGATAAAATGAT",1,69.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S113H F126I K198V",3
"lib1","SARS-CoV-2","TAAACGATATGAAAGG",5,1.29,NA,NA,NA,NA,NA,NA,"stop","F12* C195E",2
"lib1","SARS-CoV-2","TAAACGCAAAAAACCC",3,6.8,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","N40S P82L D98E V115P I142M V153Q Q163P",7
"lib1","SARS-CoV-2","TAAACGCAAATAGAAA",7,1.08,NA,NA,NA,NA,NA,NA,"stop","L5H A14L S36* K56W V77*",5
"lib1","SARS-CoV-2","TAAACGCAAATGGCTG",2,29.1,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","L60S A67P",2
"lib1","SARS-CoV-2","TAAACGCAATGCCGAG",14,58.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A22I S43K R73S G83T G116N Y178I",6
"lib1","SARS-CoV-2","TAAACGCAGACAAGCA",8,34.11,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","P82S I104T",2
"lib1","SARS-CoV-2","TAAACGCAGTAAAAGC",2,98.23,10.36,-0.41,0.05,2.92,1.02,0,">1 nonsynonymous","F156H T201Q",2
"lib1","SARS-CoV-2","TAAACGCCACAAGCAA",1,14.06,8.19,-2.58,0.2,1.5,1.1,0.02,">1 nonsynonymous","D112T P149L",2
"lib1","SARS-CoV-2","TAAACGCCCACCCTAT",4,25.05,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P96L S129P",2
"lib1","SARS-CoV-2","TAAACGCGAACACCCG",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y K128L",2
"lib1","SARS-CoV-2","TAAACGCGAGACCTTA",5,23.62,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","L5D K87D I104S G152C Q168L",5
"lib1","SARS-CoV-2","TAAACGCGCACGCGCT",3,122.53,10.28,-0.49,0.03,2.95,1.01,0,"1 nonsynonymous","G174L",1
"lib1","SARS-CoV-2","TAAACGCTATAGCCGA",1,7.11,9.83,-0.93,0.18,2.68,1.18,0.03,">1 nonsynonymous","S41V G155C",2
"lib1","SARS-CoV-2","TAAACGCTCAAAGCGA",3,23.73,8.65,-2.11,0.25,1.6,1.12,0.03,">1 nonsynonymous","C6I Y91H",2
"lib1","SARS-CoV-2","TAAACGCTGGATTACC",3,41.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D98S L131K G166K P169T",4
"lib1","SARS-CoV-2","TAAACGGAATGCCAGT",2,25.22,9.96,-0.81,0.09,2.77,1.1,0,">1 nonsynonymous","K56S N64A D98C T170A",4
"lib1","SARS-CoV-2","TAAACGGCCAATCTGC",2,78.04,9.48,-1.29,0.13,2.28,1.09,0.01,">1 nonsynonymous","C6S N13G G116H T201I",4
"lib1","SARS-CoV-2","TAAACGGCCTTTATGA",4,115.43,10.84,0.07,0.05,2.91,1.03,0,">1 nonsynonymous","N1Q K56Q",2
"lib1","SARS-CoV-2","TAAACGGGGCTAACAT",1,8.87,8.7,-2.07,0.22,2.1,1.14,0.01,">1 nonsynonymous","F8W Y35S L60P N118E",4
"lib1","SARS-CoV-2","TAAACGGGGTTACCAT",5,89.42,6,-4.76,1.69,1.5,1.19,0.02,"1 nonsynonymous","L131D",1
"lib1","SARS-CoV-2","TAAACGGTAATAAAAA",9,200.94,10.75,-0.01,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACGGTACCGATAG",4,87.53,9.91,-0.86,0.1,2.5,1.06,0,">1 nonsynonymous","C6M D90N",2
"lib1","SARS-CoV-2","TAAACGGTTGGTGACT",2,8.51,10.11,-0.65,0.12,2.52,1.04,0.01,">1 nonsynonymous","V37R D98V Q144T",3
"lib1","SARS-CoV-2","TAAACGGTTTCCATAG",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P T15W Y50R P82L P161E",5
"lib1","SARS-CoV-2","TAAACGTACATACAAA",2,75.24,9.89,-0.87,0.11,2.21,1.01,0,">1 nonsynonymous","T100Y V115L L131T",3
"lib1","SARS-CoV-2","TAAACGTCGCCGGGCC",1,71.33,10.72,-0.05,0.06,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACGTCTATATCTA",1,71.03,10.7,-0.06,0.05,2.98,1.02,0,">1 nonsynonymous","G9T K198M",2
"lib1","SARS-CoV-2","TAAACGTCTATTTCCT",11,211.64,9.9,-0.86,0.06,2.63,1.04,0,">1 nonsynonymous","V37Y N107R",2
"lib1","SARS-CoV-2","TAAACGTCTTAACAAA",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122Y T201N",2
"lib1","SARS-CoV-2","TAAACGTGAACTTATA",4,55.02,10.63,-0.14,0.03,2.93,1.04,0,">1 nonsynonymous","P54N T201I",2
"lib1","SARS-CoV-2","TAAACGTGAAGGGACA",10,219.44,10.77,0.01,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACGTGCCTATGAA",3,28.63,6.95,-3.82,0.63,1.5,1.05,0.07,">1 nonsynonymous","N118P R127D",2
"lib1","SARS-CoV-2","TAAACGTTTAATCCTA",2,41.16,10.66,-0.1,0.18,2.84,1.03,0.02,"wildtype","",0
"lib1","SARS-CoV-2","TAAACGTTTCGTATTG",16,100.66,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41R L57R P82Y",3
"lib1","SARS-CoV-2","TAAACTAAAAGCAAAT",3,40.19,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2G K48D Q79P W106L",4
"lib1","SARS-CoV-2","TAAACTAAAAGCCATA",4,35.8,10.83,0.06,0.08,2.83,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACTAAAATGAACA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","A22R D97T R127G T201*",4
"lib1","SARS-CoV-2","TAAACTAACTGAACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","TAAACTAAGAACTGAC",1,29.62,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C102V R136I V153Y",3
"lib1","SARS-CoV-2","TAAACTAAGCGCGTGT",4,28.58,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90R R179P",2
"lib1","SARS-CoV-2","TAAACTAATAAAGTAA",2,30.14,8.91,-1.85,0.13,2.66,1.08,0.01,">1 nonsynonymous","N120A T170V",2
"lib1","SARS-CoV-2","TAAACTACAAATTGTA",3,8.68,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","L5C K94I",2
"lib1","SARS-CoV-2","TAAACTACCAGAAAGG",1,51.26,8.71,-2.06,0.24,1.5,1.1,0.02,">1 nonsynonymous","V77E G83K",2
"lib1","SARS-CoV-2","TAAACTACGGATCTAA",2,93.76,10.86,0.1,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACTACGTGTACGT",1,54.29,10.5,-0.26,0.05,2.8,1.03,0,">1 nonsynonymous","D97V A105T",2
"lib1","SARS-CoV-2","TAAACTAGGACCCTAA",7,49.28,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","C6S S36F S53K P96L",4
"lib1","SARS-CoV-2","TAAACTAGGGGGGTTA",3,33.97,8.39,-2.38,0.18,1.92,1.2,0.01,">1 nonsynonymous","S43P R78I D98N R136S P169L",5
"lib1","SARS-CoV-2","TAAACTAGGTGGCGAC",1,30.91,10.74,-0.02,0.06,2.92,1.07,0,"1 nonsynonymous","G9T",1
"lib1","SARS-CoV-2","TAAACTAGTAATATAT",3,23.11,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","R179E",1
"lib1","SARS-CoV-2","TAAACTAGTCATATTA",17,192.36,10.72,-0.04,0.05,2.91,1.06,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","TAAACTAGTGCGCGAT",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W K94E F99C F156H V182S",5
"lib1","SARS-CoV-2","TAAACTATAGTGTCGA",6,19.04,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","S69V F99Y A105L V182G P197N",5
"lib1","SARS-CoV-2","TAAACTATCAATCGCT",1,5.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58L W106M Q163T",3
"lib1","SARS-CoV-2","TAAACTATCATATACT",7,57.35,9.95,-0.82,0.1,2.07,1.06,0,">1 nonsynonymous","T85Y D97F E154S V173C",4
"lib1","SARS-CoV-2","TAAACTATTTAGTACA",2,35.05,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G51W Y119P N157T",3
"lib1","SARS-CoV-2","TAAACTCACCCCTACC",1,9.34,6,-4.76,1.37,3,1.06,0,">1 nonsynonymous","D68M Y91F Y121L G174H",4
"lib1","SARS-CoV-2","TAAACTCCAAACTCCA",8,16.27,6,-4.76,1.72,3,1.23,0.01,">1 nonsynonymous","L38F F167N L183P T201W",4
"lib1","SARS-CoV-2","TAAACTCCACCTTAAA",7,2.62,NA,NA,NA,NA,NA,NA,"stop","Q84* L183P",2
"lib1","SARS-CoV-2","TAAACTCCCATGACAT",28,141.68,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G83F T100K R127L S147F",4
"lib1","SARS-CoV-2","TAAACTCCTAGTTCAC",2,11.35,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A33T A89C A105I",3
"lib1","SARS-CoV-2","TAAACTCGTTCAATAT",6,20.64,6.52,-4.25,0.67,1.5,1.17,0.04,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","TAAACTCTACCCCTAT",2,21.83,10.61,-0.16,0.09,2.89,1.05,0.01,">1 nonsynonymous","L5W D90Y V115R",3
"lib1","SARS-CoV-2","TAAACTCTAGCAGATG",2,6.6,9.46,-1.3,0.31,2.49,1.07,0.02,">1 nonsynonymous","T15K D68E D98P",3
"lib1","SARS-CoV-2","TAAACTCTCAAGCGAT",2,26.84,9.95,-0.82,0.15,2.22,1.06,0.01,"1 nonsynonymous","Y123G",1
"lib1","SARS-CoV-2","TAAACTCTTAAAAGCG",3,29.14,9.82,-0.95,0.11,1.98,1.04,0,">1 nonsynonymous","A14D S36C",2
"lib1","SARS-CoV-2","TAAACTCTTATAACGG",7,91.58,10.29,-0.47,0.04,2.89,1.04,0,">1 nonsynonymous","S43L V71M L122S",3
"lib1","SARS-CoV-2","TAAACTGAAACCTTCG",1,17.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40Y P96K S108L P149R",4
"lib1","SARS-CoV-2","TAAACTGAATAAGTCA",5,56.99,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","D112E I142W F167Y",3
"lib1","SARS-CoV-2","TAAACTGACAAACAGA",3,27.2,10.2,-0.57,0.06,2.85,1.04,0,"1 nonsynonymous","P133C",1
"lib1","SARS-CoV-2","TAAACTGACGCCTGAA",1,6.31,6,-4.76,2,3,1.08,0.02,">1 nonsynonymous","N13K S41P T63K N64T A81F I104M T140L F167S",8
"lib1","SARS-CoV-2","TAAACTGACTTAGAGA",6,51.58,6.05,-4.71,1.33,1.5,1.31,0.03,"1 nonsynonymous","C49N",1
"lib1","SARS-CoV-2","TAAACTGAGTATATTA",2,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R A89V P96Y",3
"lib1","SARS-CoV-2","TAAACTGAGTTAAGAG",1,4.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112S",1
"lib1","SARS-CoV-2","TAAACTGATACATTGA",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F N40Q F99L L162V V173F",5
"lib1","SARS-CoV-2","TAAACTGATATTGATA",1,22.66,9.64,-1.12,0.12,2.84,1.05,0.01,">1 nonsynonymous","N4G I138L P169G",3
"lib1","SARS-CoV-2","TAAACTGATTTTCTAC",2,99.46,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","TAAACTGCTTCCCGTG",5,86.56,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R78M N92P S113L Y121G L162P K198N",6
"lib1","SARS-CoV-2","TAAACTGGCACCTGAA",3,11.48,NA,NA,NA,NA,NA,NA,"stop","L5* D34R T201L",3
"lib1","SARS-CoV-2","TAAACTGGCCCTACTA",1,15.24,9.05,-1.71,0.14,2.8,1,0.01,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","TAAACTGGTACCGGCG",1,92.25,10.76,-0.01,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAACTGTCTGCCTAG",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G A42V F70M K87Y D98G A105W",6
"lib1","SARS-CoV-2","TAAACTGTGTCTTGTC",6,95.96,10.71,-0.05,0.04,2.93,1.03,0,">1 nonsynonymous","L60V T201L",2
"lib1","SARS-CoV-2","TAAACTGTGTGAGACA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","F12R D97* K128R I142T",4
"lib1","SARS-CoV-2","TAAACTGTTGGACGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3N F12C I88Y Y119F C150*",5
"lib1","SARS-CoV-2","TAAACTGTTTTTAACA",1,12.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44C A81E T100K L122V S139P",5
"lib1","SARS-CoV-2","TAAACTTAAAAATCCT",1,28.82,7.57,-3.19,0.27,1.84,1.29,0.02,">1 nonsynonymous","C61G F134D F160L",3
"lib1","SARS-CoV-2","TAAACTTAACTTGTAC",8,29.64,9.2,-1.56,0.17,1.73,1.23,0.01,">1 nonsynonymous","N13C F44R",2
"lib1","SARS-CoV-2","TAAACTTAAGTCCTTA",2,13.07,10.81,0.04,0.11,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAAACTTAAGTCTAAA",1,42.72,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","V103L N151C G166I",3
"lib1","SARS-CoV-2","TAAACTTACTTTCAAG",9,57.18,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L5M N58F R124G",3
"lib1","SARS-CoV-2","TAAACTTAGGATTGAG",1,69.38,6,-4.76,1.86,1.5,1.21,0.01,">1 nonsynonymous","P54Q G172V P197H",3
"lib1","SARS-CoV-2","TAAACTTCAAAAAGAT",6,50.94,8.56,-2.21,0.13,2.86,1,0.01,">1 nonsynonymous","I104V V115F Q168K",3
"lib1","SARS-CoV-2","TAAACTTGATAACCCG",3,53.11,9.51,-1.26,0.11,2.6,1.1,0,"1 nonsynonymous","Y121T",1
"lib1","SARS-CoV-2","TAAACTTGTTCAGCTA",5,79.58,6.08,-4.68,0.83,1.5,1.18,0.02,">1 nonsynonymous","G83V P96D P149S L162P",4
"lib1","SARS-CoV-2","TAAACTTTCGAAATTG",2,3.34,NA,NA,NA,NA,NA,NA,"stop","F12* V20M F44L D59R Q176I",5
"lib1","SARS-CoV-2","TAAACTTTGCATATTG",1,5.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63R A89R W106T",3
"lib1","SARS-CoV-2","TAAAGAAAAACAACTA",2,211.53,8.77,-1.99,0.07,2.66,1.14,0,">1 nonsynonymous","E141N G174L Q176H",3
"lib1","SARS-CoV-2","TAAAGAAAAAGCAGGA",4,18.13,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","C49R K132V A145S",3
"lib1","SARS-CoV-2","TAAAGAAAAATCACTA",6,12.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99A R124S K128Q",3
"lib1","SARS-CoV-2","TAAAGAAAAGTCTGTC",8,182.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K94Y N107A Q168T P177G",4
"lib1","SARS-CoV-2","TAAAGAAACCATACTG",6,60.44,10.66,-0.1,0.05,2.96,1.03,0,">1 nonsynonymous","Y66M V153M",2
"lib1","SARS-CoV-2","TAAAGAAACCGTTTCA",1,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R A105L C195S",3
"lib1","SARS-CoV-2","TAAAGAAAGACTACGA",6,72.45,10.54,-0.22,0.05,2.87,1.02,0,">1 nonsynonymous","A42C D97H",2
"lib1","SARS-CoV-2","TAAAGAAAGTCACATT",8,37,6.38,-4.38,0.41,1.5,1.11,0.01,">1 nonsynonymous","T63P F167S",2
"lib1","SARS-CoV-2","TAAAGAAAGTCGAGCG",5,144.99,9.98,-0.78,0.11,2.37,1.02,0,">1 nonsynonymous","D59W D90T T148V",3
"lib1","SARS-CoV-2","TAAAGAACAAAACTAT",1,22.27,10.69,-0.07,0.1,2.84,1.09,0.01,">1 nonsynonymous","G9H K26L",2
"lib1","SARS-CoV-2","TAAAGAACACCAAATC",5,61.92,10.68,-0.08,0.07,2.84,1.11,0,"1 nonsynonymous","N40R",1
"lib1","SARS-CoV-2","TAAAGAACACTTGCGG",3,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y R27T Y93A W106R N118C T170M",6
"lib1","SARS-CoV-2","TAAAGAACATCATTAA",2,74.87,8.39,-2.37,0.18,1.77,1.19,0.01,">1 nonsynonymous","F99H Q144S Y175H",3
"lib1","SARS-CoV-2","TAAAGAACATGGGGCT",1,21.44,10.15,-0.61,0.39,1.5,1,0.07,">1 nonsynonymous","T55G I104Q T148R",3
"lib1","SARS-CoV-2","TAAAGAACCTATGCAA",3,54.12,10.11,-0.65,0.11,2.52,1.02,0,">1 nonsynonymous","G51C T201R",2
"lib1","SARS-CoV-2","TAAAGAACGAGTACGC",3,0.07,NA,NA,NA,NA,NA,NA,"stop","F8V D98* Y175F",3
"lib1","SARS-CoV-2","TAAAGAACTACTCCTA",10,244.63,8.78,-1.98,0.15,1.5,1.15,0.01,">1 nonsynonymous","C31L W106T",2
"lib1","SARS-CoV-2","TAAAGAACTCATGGGT",2,66.92,10.38,-0.38,0.09,2.84,1.03,0,">1 nonsynonymous","F44Y D98L T201V",3
"lib1","SARS-CoV-2","TAAAGAAGAGACTCAG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","F17G S69* G86F V103* F167L",5
"lib1","SARS-CoV-2","TAAAGAAGATGAAAAA",3,68.74,10.74,-0.03,0.05,2.92,1,0,"1 nonsynonymous","N64P",1
"lib1","SARS-CoV-2","TAAAGAAGGGGACACG",7,59.73,6,-4.76,1.1,1.5,1.21,0.02,">1 nonsynonymous","I2V A14W D59P D90T N107D Y143F S200E",7
"lib1","SARS-CoV-2","TAAAGAATCAAAGCCA",4,17.91,6.04,-4.73,1.04,1.5,1.17,0.02,">1 nonsynonymous","D68P A105D R127A",3
"lib1","SARS-CoV-2","TAAAGAATCAATACAT",2,13.55,6.07,-4.69,0.49,1.5,1.1,0.01,">1 nonsynonymous","V11T D59P A89F",3
"lib1","SARS-CoV-2","TAAAGAATCATGAGTA",2,78.81,9.56,-1.21,0.09,2.71,1.07,0,">1 nonsynonymous","T3Y T63S G146N",3
"lib1","SARS-CoV-2","TAAAGAATCGACGGAT",5,37.41,6,-4.76,2,1.54,1.15,0.01,">1 nonsynonymous","P82A S113C",2
"lib1","SARS-CoV-2","TAAAGAATCTATGATT",8,25.64,6.18,-4.59,1.01,1.5,1.23,0.04,">1 nonsynonymous","G74P S139G",2
"lib1","SARS-CoV-2","TAAAGAATTAAGCAAA",1,79.33,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","F17P S36E E141Y Y175C",4
"lib1","SARS-CoV-2","TAAAGAATTTCCCTGA",5,42.3,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","C6E N92L T148K V153I",4
"lib1","SARS-CoV-2","TAAAGACAACTGACAT",3,50.05,6.11,-4.66,0.57,1.5,1.11,0.01,">1 nonsynonymous","G9L D112A",2
"lib1","SARS-CoV-2","TAAAGACAATGAAATC",1,22.48,10.35,-0.41,0.08,2.82,1.01,0,">1 nonsynonymous","R27V S45Y D97H",3
"lib1","SARS-CoV-2","TAAAGACACGAACACA",3,31.38,10.5,-0.26,0.13,2.84,1.06,0.01,">1 nonsynonymous","P7K C61G D97S",3
"lib1","SARS-CoV-2","TAAAGACACGAGAAAC",6,39.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C31T L122R Y143K",3
"lib1","SARS-CoV-2","TAAAGACAGTGTACAG",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R W23L Q163W",3
"lib1","SARS-CoV-2","TAAAGACATGGTGAAA",7,2.24,NA,NA,NA,NA,NA,NA,"stop","T3I E10K T100* S113V",4
"lib1","SARS-CoV-2","TAAAGACCATAATTCC",7,39.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S36V T55V N107E R127A T148P",5
"lib1","SARS-CoV-2","TAAAGACCATGAAACA",1,27.38,9.75,-1.01,0.12,2.78,1.02,0,">1 nonsynonymous","I104C Y159W",2
"lib1","SARS-CoV-2","TAAAGACCGAAATAGC",4,41.07,6.48,-4.28,0.31,1.5,1.09,0.01,">1 nonsynonymous","T63S G146P F160L",3
"lib1","SARS-CoV-2","TAAAGACCTCTACGAA",8,92.88,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F47N L60P D68G I104T V153L",5
"lib1","SARS-CoV-2","TAAAGACCTTAAAAAG",7,46.55,10.1,-0.67,0.05,2.78,1.03,0,">1 nonsynonymous","G83F K114L L122E Q144M",4
"lib1","SARS-CoV-2","TAAAGACTTCCTGAGT",4,36.05,10.68,-0.08,0.07,2.93,1,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","TAAAGAGAAAATATTG",1,10.44,8.96,-1.8,0.18,2.61,1.22,0.02,">1 nonsynonymous","N4I S113T",2
"lib1","SARS-CoV-2","TAAAGAGAAGATACTG",3,24.24,10.76,0,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAGAGACGAGATTA",2,72.38,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","W106R Q176R",2
"lib1","SARS-CoV-2","TAAAGAGAGTAGCAAA",4,102.7,10.76,-0.01,0.05,2.93,1.03,0,"1 nonsynonymous","T148E",1
"lib1","SARS-CoV-2","TAAAGAGATAGACCTC",1,6.35,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","F8N A22L V77K A89M V103I",5
"lib1","SARS-CoV-2","TAAAGAGATTAAAACT",3,20.71,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N107Y R124N V173Y",3
"lib1","SARS-CoV-2","TAAAGAGCACGCGAGT",1,21.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3D F47L Q84N N110S Y123F F134D Y178L",7
"lib1","SARS-CoV-2","TAAAGAGCCTAGCTAA",3,31.63,10.19,-0.57,0.41,1.5,1,0.07,">1 nonsynonymous","V37G P96S L162Y G174V",4
"lib1","SARS-CoV-2","TAAAGAGCTAAGGCTA",5,42.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L95N N118K A145I",3
"lib1","SARS-CoV-2","TAAAGAGGAAAATACT",1,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137S G166I",2
"lib1","SARS-CoV-2","TAAAGAGGGGTGGGTT",5,119.53,8.49,-2.27,0.11,2.74,1.06,0.01,"1 nonsynonymous","Y175C",1
"lib1","SARS-CoV-2","TAAAGAGTAAATCCAA",2,41.6,8.68,-2.09,0.22,1.67,1.14,0.02,">1 nonsynonymous","A22V V37F K94H V115G V153C",5
"lib1","SARS-CoV-2","TAAAGAGTCAGATAAT",8,31,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F12A W23G P149W",3
"lib1","SARS-CoV-2","TAAAGAGTCTCGTCGC",10,83.33,6,-4.76,0.95,1.5,1.14,0.01,">1 nonsynonymous","F17V Q84P N110L",3
"lib1","SARS-CoV-2","TAAAGAGTGTATAATA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib1","SARS-CoV-2","TAAAGAGTTCCTCAAG",3,36.83,9.47,-1.3,0.08,2.91,1.04,0,">1 nonsynonymous","L5M T85R I104L Y119S N151L",5
"lib1","SARS-CoV-2","TAAAGAGTTTATAAGC",6,362.01,9.35,-1.42,0.05,2.82,1.08,0,">1 nonsynonymous","Y119W T201A",2
"lib1","SARS-CoV-2","TAAAGAGTTTTCAAAG",8,53.38,9.7,-1.06,0.09,2.03,1.05,0,">1 nonsynonymous","N24L D98S N130D",3
"lib1","SARS-CoV-2","TAAAGATAAATAAAAA",4,23.53,6.99,-3.77,0.32,1.5,1.09,0.03,">1 nonsynonymous","D90L I104E R124P R136D K199S",5
"lib1","SARS-CoV-2","TAAAGATAAATACAAT",3,44.55,10.65,-0.12,0.04,2.91,1.05,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","TAAAGATAACTGGAAG",3,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L N110R",2
"lib1","SARS-CoV-2","TAAAGATAAGCCATCT",11,195.85,10.59,-0.17,0.05,2.93,1.02,0,">1 nonsynonymous","A42T S200K",2
"lib1","SARS-CoV-2","TAAAGATACCTCGATG",3,23.8,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L38R N64L G146I",3
"lib1","SARS-CoV-2","TAAAGATAGTTATGCT",4,10.66,6,-4.76,1.45,1.53,1.06,0.03,">1 nonsynonymous","L95M L122P T201K",3
"lib1","SARS-CoV-2","TAAAGATCAAGCGAAG",2,10.33,10.38,-0.38,0.1,2.85,1.17,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","TAAAGATCATCCAATG",1,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A S53T Y91E",3
"lib1","SARS-CoV-2","TAAAGATGACCTAAAT",1,92.98,6,-4.76,2,1.5,1.14,0.01,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","TAAAGATGTGTATGAC",8,121.93,9.23,-1.54,0.11,1.77,1.14,0,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","TAAAGATGTTGTCGAT",4,0.9,NA,NA,NA,NA,NA,NA,"stop","K94Q V103W N120*",3
"lib1","SARS-CoV-2","TAAAGATTATGCTAGC",2,8.94,6.27,-4.5,0.7,1.5,1.06,0.03,">1 nonsynonymous","V20M Y35F L131A S184G A190L",5
"lib1","SARS-CoV-2","TAAAGATTTTCTTAAA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W N30E Y35S Y119M F134A",5
"lib1","SARS-CoV-2","TAAAGCAAAAAGTAAT",1,1.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149M",1
"lib1","SARS-CoV-2","TAAAGCAAAACACGTT",6,135.33,9.48,-1.29,0.08,2.73,1.1,0,">1 nonsynonymous","C61F N118S Y178F",3
"lib1","SARS-CoV-2","TAAAGCAAATCCTATA",2,7.94,6,-4.76,2,3,1.11,0.03,">1 nonsynonymous","P54E S129F G146L",3
"lib1","SARS-CoV-2","TAAAGCAACACTGTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55K D98* P161S",3
"lib1","SARS-CoV-2","TAAAGCAACCAACTTT",12,56.32,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12N A89D D97C A105G",4
"lib1","SARS-CoV-2","TAAAGCAAGCAGAAAT",1,30.02,8.69,-2.08,0.42,1.5,1,0.06,">1 nonsynonymous","V52C L57A N157V",3
"lib1","SARS-CoV-2","TAAAGCAAGGAAGTAC",6,84.64,10.22,-0.54,0.05,2.72,1.01,0,"1 nonsynonymous","L131C",1
"lib1","SARS-CoV-2","TAAAGCAATACTCCAG",3,74.69,10.39,-0.38,0.04,2.93,1.03,0,">1 nonsynonymous","L60F K87P T201W",3
"lib1","SARS-CoV-2","TAAAGCACAGCAGGCT",5,176.54,10.75,-0.01,0.06,2.88,1.05,0,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","TAAAGCACATGAGTTA",9,156.91,9.07,-1.69,0.07,2.71,1.12,0,">1 nonsynonymous","S41W D98G V115A T170H T201Y",5
"lib1","SARS-CoV-2","TAAAGCACGGCTCACT",2,66.32,9.84,-0.92,0.16,2.18,1.06,0.01,">1 nonsynonymous","V52R L60G",2
"lib1","SARS-CoV-2","TAAAGCAGAGTATCTA",2,50.42,6,-4.76,1.6,1.5,1.27,0.03,">1 nonsynonymous","N64R I88M T140W G166S",4
"lib1","SARS-CoV-2","TAAAGCAGTACAAAAA",1,5.93,6.78,-3.99,2,3,1.34,0.04,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","TAAAGCAGTCGTCACC",1,21,8.8,-1.96,0.18,2.52,1.2,0.01,">1 nonsynonymous","C61H F167W V173R",3
"lib1","SARS-CoV-2","TAAAGCATCAAATTTC",6,0.39,NA,NA,NA,NA,NA,NA,"stop","P7Q L60* K128H Q163I",4
"lib1","SARS-CoV-2","TAAAGCATCTAATTAA",2,20.67,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","P7T P82R K87G F126G",4
"lib1","SARS-CoV-2","TAAAGCCACTAAATCG",1,28.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95P N110W P197K",3
"lib1","SARS-CoV-2","TAAAGCCACTTGAAAC",1,32.6,6.25,-4.52,1.01,1.5,1.29,0.07,">1 nonsynonymous","L60G N92Q I142S",3
"lib1","SARS-CoV-2","TAAAGCCCAAGTCAAT",2,31.63,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","Y123P N157K",2
"lib1","SARS-CoV-2","TAAAGCCCAATATTGA",5,93.81,10.7,-0.06,0.04,2.92,1.05,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","TAAAGCCCACTCCTTT",5,84.55,6,-4.76,1.02,1.5,1.1,0.01,">1 nonsynonymous","F12S Y143S",2
"lib1","SARS-CoV-2","TAAAGCCCATAAATTG",3,5.16,6.52,-4.24,2,3,1.03,0,">1 nonsynonymous","P7A A42C C158M",3
"lib1","SARS-CoV-2","TAAAGCCGAGACACCG",5,0.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1D",1
"lib1","SARS-CoV-2","TAAAGCCGATGGCAAT",6,33.21,10.79,0.02,0.08,2.92,1.06,0,"1 nonsynonymous","V153M",1
"lib1","SARS-CoV-2","TAAAGCCGCAGTGAGT",3,10.4,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86D I142H",2
"lib1","SARS-CoV-2","TAAAGCCTATGCCGAT",2,47.03,6,-4.76,2,3,1.12,0,">1 nonsynonymous","A14R S41A T100Q S113L",4
"lib1","SARS-CoV-2","TAAAGCGCAGTAAATC",12,67.28,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","A18T D90A T100N Y121S V153D",5
"lib1","SARS-CoV-2","TAAAGCGCTAATATAG",5,356.07,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V37P N64P L95R Q144K",4
"lib1","SARS-CoV-2","TAAAGCGGGCCCCACA",4,100.37,8.26,-2.51,0.28,1.5,1.04,0.03,">1 nonsynonymous","F12T K26C Y35E",3
"lib1","SARS-CoV-2","TAAAGCGGTCAACAGT",3,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N S45Q P169V",3
"lib1","SARS-CoV-2","TAAAGCGGTGGACGTG",3,14.06,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L57S F99S K128M",3
"lib1","SARS-CoV-2","TAAAGCTACATATGTT",2,31.75,7.81,-2.95,0.17,1.5,1.03,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","TAAAGCTACCAAGGGT",6,1.07,NA,NA,NA,NA,NA,NA,"stop","P54Q V65E G86L E141* E154G Y159P",6
"lib1","SARS-CoV-2","TAAAGCTATAGAATCA",1,11.19,10.47,-0.3,0.08,2.85,1.12,0,"1 nonsynonymous","N4I",1
"lib1","SARS-CoV-2","TAAAGCTATCGTTGCA",6,86.81,10.68,-0.08,0.06,2.9,1.04,0,">1 nonsynonymous","T100Q L122W",2
"lib1","SARS-CoV-2","TAAAGCTCTTAAAATA",3,64.54,9.01,-1.76,0.09,2.59,1.21,0,">1 nonsynonymous","T85E R136L G166S",3
"lib1","SARS-CoV-2","TAAAGCTCTTTGTCAC",5,79.62,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A67N Y165L P197T",3
"lib1","SARS-CoV-2","TAAAGCTGAGCCTGGT",1,22.42,10.86,0.09,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAGCTGTACTCAAA",1,20.01,9.8,-0.97,0.17,2.34,1.04,0.01,">1 nonsynonymous","N30V T55D Q163E",3
"lib1","SARS-CoV-2","TAAAGCTTCCTAGGAA",2,52.43,10.22,-0.55,0.05,2.85,1.03,0,">1 nonsynonymous","N13M T201G",2
"lib1","SARS-CoV-2","TAAAGCTTCGCGGAGT",3,11.09,6.8,-3.96,0.52,1.5,1.1,0.05,">1 nonsynonymous","N64L W106S Y119W R136S E141Q",5
"lib1","SARS-CoV-2","TAAAGCTTCTCCCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Y D34K T46I I138T V182M",5
"lib1","SARS-CoV-2","TAAAGCTTGCCGTAGA",7,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D P82K A105Y",3
"lib1","SARS-CoV-2","TAAAGGAAAAAATGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3G C49N C61W A105*",4
"lib1","SARS-CoV-2","TAAAGGAAATGGAAAT",3,55.9,9.88,-0.89,0.11,2.02,1.05,0.01,">1 nonsynonymous","F62T Y93F K114Y",3
"lib1","SARS-CoV-2","TAAAGGAACCTTGTGC",4,92.34,9.9,-0.86,0.05,2.38,1.02,0,">1 nonsynonymous","Y91N K114H L122T Q144A",4
"lib1","SARS-CoV-2","TAAAGGAATATAGCAT",5,37.96,9.35,-1.41,0.14,1.63,1.1,0.01,">1 nonsynonymous","Y50S G146S",2
"lib1","SARS-CoV-2","TAAAGGAATGAATGAT",1,6.59,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","V20S V115F G152S Y165T",4
"lib1","SARS-CoV-2","TAAAGGACACATTAAC",1,5.57,NA,NA,NA,NA,NA,NA,"stop","Y35N F62Y Q84R Y91* Q176S",5
"lib1","SARS-CoV-2","TAAAGGACCACTTTAA",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q G86S V103R R136Q",4
"lib1","SARS-CoV-2","TAAAGGACCCTCTTCC",3,34.87,10.2,-0.57,0.14,2.59,1.07,0.01,"1 nonsynonymous","F156H",1
"lib1","SARS-CoV-2","TAAAGGAGCCCGAATA",1,14.18,10.2,-0.56,0.05,2.98,1,0,"1 nonsynonymous","Y50H",1
"lib1","SARS-CoV-2","TAAAGGAGTCAAGATT",1,20.34,10.85,0.09,0.09,2.96,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAGGATGTGGAGAG",3,31.93,10.9,0.13,0.07,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAAGGATTAAAATAT",1,16.72,10.14,-0.62,0.09,2.91,1,0.01,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","TAAAGGATTAGTTCGG",1,113.28,6.81,-3.96,0.24,1.62,1.17,0.01,">1 nonsynonymous","G146E N157T",2
"lib1","SARS-CoV-2","TAAAGGCAAACGAATA",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W S45M S129I",3
"lib1","SARS-CoV-2","TAAAGGCCCAAAGAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L R25W K56S A81G W106E A145Y",6
"lib1","SARS-CoV-2","TAAAGGCCCGGCGAGT",4,19.16,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","V20Q V115S T148H",3
"lib1","SARS-CoV-2","TAAAGGCCGATTGTAC",3,17.57,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","G101A",1
"lib1","SARS-CoV-2","TAAAGGCGAAAGTGAC",10,93.48,9.59,-1.18,0.13,1.9,1.12,0.01,">1 nonsynonymous","F17E Y35L T63L",3
"lib1","SARS-CoV-2","TAAAGGCTAGAAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102A G174N",2
"lib1","SARS-CoV-2","TAAAGGGAAAACGACT",8,0.57,NA,NA,NA,NA,NA,NA,"stop","G9V K48* G101S R136E",4
"lib1","SARS-CoV-2","TAAAGGGAGCAATTCA",1,12,9.41,-1.36,0.37,1.5,1.06,0.08,">1 nonsynonymous","A14W K56Y",2
"lib1","SARS-CoV-2","TAAAGGGAGCTACTAG",14,77.22,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","L60P Y91A N118H",3
"lib1","SARS-CoV-2","TAAAGGGTGCTCTGAG",8,152.44,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5E I72S Y119D",3
"lib1","SARS-CoV-2","TAAAGGTAAATTAGCT",1,41.4,10.29,-0.47,0.07,2.94,1,0,"1 nonsynonymous","C6T",1
"lib1","SARS-CoV-2","TAAAGGTAAGTTTGGA",7,23.55,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","A89Y P96Q",2
"lib1","SARS-CoV-2","TAAAGGTAGTTCAACG",1,33.56,10.8,0.04,0.08,2.85,1.08,0,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","TAAAGGTCAGGAACTA",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R Y175G",2
"lib1","SARS-CoV-2","TAAAGGTCCATAAACT",1,8.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10L S45Y G101N",3
"lib1","SARS-CoV-2","TAAAGGTGAGGCACAC",3,64.07,9.03,-1.74,0.11,2.18,1.15,0.01,">1 nonsynonymous","P54G T63V K87N G152L",4
"lib1","SARS-CoV-2","TAAAGTAAAAAGTGTT",1,6.19,10.53,-0.24,0.19,2.19,1,0.01,">1 nonsynonymous","P7L P96S",2
"lib1","SARS-CoV-2","TAAAGTAAACTTTCCT",2,115.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9M Y175G",2
"lib1","SARS-CoV-2","TAAAGTAAAGAATTCA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","K132V S147*",2
"lib1","SARS-CoV-2","TAAAGTAAGAACGGCA",4,64.84,10.78,0.02,0.06,2.95,1.02,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","TAAAGTAATAATCAAT",6,273.48,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41W L60H W106Q Q176V",4
"lib1","SARS-CoV-2","TAAAGTAATCAACCGT",3,103.02,10.41,-0.35,0.04,2.97,1.02,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","TAAAGTAATGGTAAAT",2,45.16,9.92,-0.85,0.12,2.44,1.01,0,">1 nonsynonymous","V103I Y178S",2
"lib1","SARS-CoV-2","TAAAGTACAATATTTG",2,4.96,NA,NA,NA,NA,NA,NA,"stop","A81K A89L Y165*",3
"lib1","SARS-CoV-2","TAAAGTACGACAACTA",2,19.82,6,-4.76,1.82,1.5,1.16,0.02,">1 nonsynonymous","D68I G83D D97I",3
"lib1","SARS-CoV-2","TAAAGTACGCACCTCC",7,169.92,9.76,-1.01,0.1,2.73,1.07,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","TAAAGTACTCTCCACA",5,43.98,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T55V Y93S T201V",3
"lib1","SARS-CoV-2","TAAAGTAGCACTAAAA",2,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V T63Q P96L A105M",4
"lib1","SARS-CoV-2","TAAAGTATAACATCCG",5,106.21,10.34,-0.42,0.02,2.87,1.06,0,">1 nonsynonymous","Y121M T148A T201A",3
"lib1","SARS-CoV-2","TAAAGTATAAGCTATA",3,20.71,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A18R P82V F99V R136P V173Q",5
"lib1","SARS-CoV-2","TAAAGTATATACGATG",5,33.71,6,-4.76,2,3,1.21,0,">1 nonsynonymous","G86Q L95Y",2
"lib1","SARS-CoV-2","TAAAGTATTAACATTA",2,20.93,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N1Q G51D G117H P169C",4
"lib1","SARS-CoV-2","TAAAGTATTATGATCT",3,3.46,NA,NA,NA,NA,NA,NA,"stop","V37* C150H G174V",3
"lib1","SARS-CoV-2","TAAAGTATTATTACGC",8,130.6,8.99,-1.78,0.15,1.94,1.17,0.01,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","TAAAGTATTCATAGAA",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E N107G D137N",3
"lib1","SARS-CoV-2","TAAAGTCAAAATTGAC",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D S41F V115S R127S F134I T201N",6
"lib1","SARS-CoV-2","TAAAGTCAAGATATGT",4,14.13,9.56,-1.2,0.13,1.85,1.11,0.01,">1 nonsynonymous","D34A D90W",2
"lib1","SARS-CoV-2","TAAAGTCAATCAGGAT",6,1.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N110Q",1
"lib1","SARS-CoV-2","TAAAGTCATCCAAGTC",6,98.51,10.74,-0.03,0.09,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAAGTCATTAACTTG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S T63D D98L",3
"lib1","SARS-CoV-2","TAAAGTCCACCATTAG",11,139.3,9.25,-1.52,0.06,2.78,1.12,0,">1 nonsynonymous","D98T S113T",2
"lib1","SARS-CoV-2","TAAAGTCCACCGTACG",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L G86A P149L",3
"lib1","SARS-CoV-2","TAAAGTCCGACTTATT",1,32.02,10.65,-0.12,0.09,2.92,1.03,0,"1 nonsynonymous","G83A",1
"lib1","SARS-CoV-2","TAAAGTCGTCCGGTTA",1,3.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAAAGTGAAATCTTGA",1,21.58,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8K I104Q C150R",3
"lib1","SARS-CoV-2","TAAAGTGAGCAACTGT",4,53.8,10.76,-0.01,0.06,2.96,1.01,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","TAAAGTGAGGAATCCT",2,33.88,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V52D W106P Y123P",3
"lib1","SARS-CoV-2","TAAAGTGAGTACTTAA",6,48.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56E I88T F99A T140P T170C",5
"lib1","SARS-CoV-2","TAAAGTGCCTTAGGGA",3,32.13,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R25Q S43L A67T S69I W106K Q176C",6
"lib1","SARS-CoV-2","TAAAGTGCGCTCACTA",2,52.95,10.34,-0.43,0.06,2.88,1,0,">1 nonsynonymous","S36L T46H V103I",3
"lib1","SARS-CoV-2","TAAAGTGGGGATAGAT",6,114.12,7.97,-2.8,0.14,1.84,1.12,0.01,">1 nonsynonymous","L5V F62A Y143K A190D",4
"lib1","SARS-CoV-2","TAAAGTGGTATACAGA",7,92.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Q84V Y91H F99S Y119L K132G",5
"lib1","SARS-CoV-2","TAAAGTGTAACCCCTG",4,392.9,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y93I N107Y T148M F156V",4
"lib1","SARS-CoV-2","TAAAGTGTCGGTCATG",5,14.27,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N92I G172L",2
"lib1","SARS-CoV-2","TAAAGTGTGAGTTAAA",1,22.58,9.62,-1.14,0.06,2.9,1.09,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","TAAAGTGTTAATCCCC",2,38.24,8.94,-1.82,0.09,2.41,1.15,0,">1 nonsynonymous","K48L D97F Y119S T148V",4
"lib1","SARS-CoV-2","TAAAGTGTTTTTTATA",3,59.01,8.69,-2.08,0.19,2.64,1.08,0.01,">1 nonsynonymous","L111I S113V P149L",3
"lib1","SARS-CoV-2","TAAAGTTAATTCATAG",1,34.82,10.66,-0.1,0.09,2.97,1.01,0,"1 nonsynonymous","S43V",1
"lib1","SARS-CoV-2","TAAAGTTCGATTTTAG",2,24.8,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F8S S19F N64T D97S Y159L",5
"lib1","SARS-CoV-2","TAAAGTTGAAATAAAC",4,17.49,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","A18V G86L",2
"lib1","SARS-CoV-2","TAAAGTTGAACAATGG",17,284.3,7.82,-2.94,0.1,1.5,1.11,0,"1 nonsynonymous","F167H",1
"lib1","SARS-CoV-2","TAAAGTTGATAATAAT",10,106.56,6.95,-3.82,0.18,1.5,1.13,0.01,">1 nonsynonymous","I2K N64T K94M F126S",4
"lib1","SARS-CoV-2","TAAAGTTTAATGTACT",5,42.23,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","S43P C61M I80W P133L Q176M",5
"lib1","SARS-CoV-2","TAAAGTTTATGAAACT",4,55.3,10.8,0.04,0.08,2.87,1.07,0,"1 nonsynonymous","L188I",1
"lib1","SARS-CoV-2","TAAAGTTTCCCAGGGC",1,14.44,10.59,-0.17,0.13,2.79,1.12,0.01,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TAAAGTTTGCAAAAAC",3,24.87,10.36,-0.41,0.06,2.96,1,0,">1 nonsynonymous","K87R I142T",2
"lib1","SARS-CoV-2","TAAAGTTTGGCTCCTA",2,36.79,6.69,-4.08,0.31,1.5,1.08,0.01,">1 nonsynonymous","Y66R W106M F126G",3
"lib1","SARS-CoV-2","TAAAGTTTGTATGCCA",4,44.35,9.75,-1.01,0.16,1.98,1.1,0.01,">1 nonsynonymous","S45D Y91T Q144N",3
"lib1","SARS-CoV-2","TAAATAAAAACCCATG",2,28.68,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","T46D L60Q P82L P96T K199V",5
"lib1","SARS-CoV-2","TAAATAAAAACGTTAA",6,119.18,10.3,-0.47,0.02,2.91,1.04,0,">1 nonsynonymous","F62T G174Q",2
"lib1","SARS-CoV-2","TAAATAAAAACTTTGG",2,43.69,9.88,-0.89,0.11,2.23,1.09,0.01,">1 nonsynonymous","V37F P54H A89N K132I",4
"lib1","SARS-CoV-2","TAAATAAAAATTATCA",6,20.03,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F12C A105H",2
"lib1","SARS-CoV-2","TAAATAAAACCCAATA",2,22.59,10.05,-0.72,0.1,2.78,1.09,0.01,"1 nonsynonymous","E135K",1
"lib1","SARS-CoV-2","TAAATAAAAGCTGGGG",9,0.93,NA,NA,NA,NA,NA,NA,"stop","N110A P177*",2
"lib1","SARS-CoV-2","TAAATAAAATAAGTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26R A33N K56M K128V Y165P",5
"lib1","SARS-CoV-2","TAAATAAAATAGATGT",5,2.08,NA,NA,NA,NA,NA,NA,"stop","L5Y D90V T170*",3
"lib1","SARS-CoV-2","TAAATAAAATCAAGCA",11,75.47,9.15,-1.62,0.19,1.5,1.09,0.02,">1 nonsynonymous","T15G Y35T Y123V G152N",4
"lib1","SARS-CoV-2","TAAATAAAATCTGGAG",3,14.69,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R16D K87L R124D",3
"lib1","SARS-CoV-2","TAAATAAAATGGTGTT",2,10.95,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T3Y T15I A42T G86L G172E R179V",6
"lib1","SARS-CoV-2","TAAATAAAATTATCCG",3,12.01,6,-4.76,1.27,2.69,1.1,0.03,">1 nonsynonymous","T3M A81E L95C I104Y",4
"lib1","SARS-CoV-2","TAAATAAAATTCACGT",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84K G86D K87S W106C S200R",5
"lib1","SARS-CoV-2","TAAATAAACCATTGAA",3,17.39,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","P7H F44V T55S V103D Y119Q T140I",6
"lib1","SARS-CoV-2","TAAATAAACGCAGAAG",4,1.33,NA,NA,NA,NA,NA,NA,"stop","T3N N13S C49Y V65*",4
"lib1","SARS-CoV-2","TAAATAAACTACACAT",7,156.28,10.08,-0.68,0.06,2.81,1,0,">1 nonsynonymous","C6F V37Q K56M",3
"lib1","SARS-CoV-2","TAAATAAAGAAGGATT",6,64.82,8.57,-2.19,0.3,1.5,1.11,0.04,">1 nonsynonymous","A22Y A81F K198T",3
"lib1","SARS-CoV-2","TAAATAAAGCTCCTAA",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77Q K94T V103N G174H",4
"lib1","SARS-CoV-2","TAAATAAAGGTAACAC",5,39.58,9.01,-1.75,0.16,2.15,1.08,0.01,">1 nonsynonymous","S113G G146W",2
"lib1","SARS-CoV-2","TAAATAAATGAACATA",9,98.12,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N1D I28Q G172S",3
"lib1","SARS-CoV-2","TAAATAACAAGAACGA",5,84.25,10.7,-0.07,0.07,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATAACAAGGCTGC",3,15.33,10.99,0.23,0.07,2.9,1,0,">1 nonsynonymous","N58T Y123F",2
"lib1","SARS-CoV-2","TAAATAACAATCGTTT",1,6.59,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F8S P82L K87F Q168I",4
"lib1","SARS-CoV-2","TAAATAACAATGCGGT",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G K48D T55P G86M",4
"lib1","SARS-CoV-2","TAAATAACAGAGCAAG",1,7.79,8.87,-1.9,0.36,1.94,1.01,0.04,">1 nonsynonymous","D97K Y165S V173R",3
"lib1","SARS-CoV-2","TAAATAACATACCGCC",3,49.58,10.59,-0.18,0.07,2.93,1.05,0,"1 nonsynonymous","K87H",1
"lib1","SARS-CoV-2","TAAATAACCTCTGAAC",11,62.04,6.79,-3.98,0.33,1.5,1.12,0.02,">1 nonsynonymous","G51A K87T N107S G152Y",4
"lib1","SARS-CoV-2","TAAATAACGTTTAAAA",4,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71T L95S",2
"lib1","SARS-CoV-2","TAAATAACTACCTTCC",1,13.01,6,-4.76,2,1.5,1.43,0.04,">1 nonsynonymous","N4V G51I E141S",3
"lib1","SARS-CoV-2","TAAATAACTAGGGACT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","A89* F99L",2
"lib1","SARS-CoV-2","TAAATAAGATTATAAG",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V D137Y I142L",3
"lib1","SARS-CoV-2","TAAATAAGCATGTTGT",2,136.39,8.4,-2.36,0.14,2.67,1.08,0.01,">1 nonsynonymous","K87S T170A P177A",3
"lib1","SARS-CoV-2","TAAATAAGCCTATAAC",15,77.37,6.22,-4.54,0.81,1.5,1.22,0.03,">1 nonsynonymous","L162F F185S",2
"lib1","SARS-CoV-2","TAAATAAGGAACAACT",5,116.42,10.72,-0.05,0.06,2.91,1.06,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TAAATAAGGTCCAGTG",2,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Q D90L T100A",3
"lib1","SARS-CoV-2","TAAATAAGGTCTAGGT",1,3.99,NA,NA,NA,NA,NA,NA,"stop","A42W K48L Q176*",3
"lib1","SARS-CoV-2","TAAATAAGTGAAGTTC",3,11.35,8.77,-1.99,0.16,2.69,1.03,0.01,">1 nonsynonymous","A18P G117I G152T",3
"lib1","SARS-CoV-2","TAAATAATAGATTGAA",8,28.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17Y Y91R V103R Y123M",4
"lib1","SARS-CoV-2","TAAATAATAGCCCTAA",1,46.66,9.82,-0.95,0.09,2.06,1.06,0,">1 nonsynonymous","I2K Y50M",2
"lib1","SARS-CoV-2","TAAATAATAGTTAAAT",7,51.32,10.62,-0.14,0.05,2.89,1.03,0,">1 nonsynonymous","S41E C61A",2
"lib1","SARS-CoV-2","TAAATAATCCCATAAC",12,142.23,10.05,-0.72,0.05,2.67,1.05,0,">1 nonsynonymous","L5R G9W F134C K198A",4
"lib1","SARS-CoV-2","TAAATAATCGAAGAAT",8,106.8,10.08,-0.69,0.06,2.84,1.02,0,"1 nonsynonymous","C31G",1
"lib1","SARS-CoV-2","TAAATAATCTGCCAAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S19Y G86D W106K G146E Q163P G172*",6
"lib1","SARS-CoV-2","TAAATAATGGTATGGA",8,0.57,NA,NA,NA,NA,NA,NA,"stop","Y35T Y93L G166*",3
"lib1","SARS-CoV-2","TAAATAATGTTTTTAT",2,1.77,NA,NA,NA,NA,NA,NA,"stop","A14E Y39V N58* C102L N118C E154V F160S G196N",8
"lib1","SARS-CoV-2","TAAATAATTGCTGCTG",6,79.18,10.42,-0.35,0.07,2.86,1.02,0,"1 nonsynonymous","N24Y",1
"lib1","SARS-CoV-2","TAAATAATTGGTTACG",6,165.3,9.84,-0.93,0.11,1.99,1.09,0,">1 nonsynonymous","Y35V A89H",2
"lib1","SARS-CoV-2","TAAATAATTTCCATAG",1,7.53,10.78,0.02,0.13,2.94,1,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TAAATACAAGTAGCGG",6,30.63,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","P96L V103L G152D",3
"lib1","SARS-CoV-2","TAAATACAATAGATAT",4,1.16,NA,NA,NA,NA,NA,NA,"stop","C49* N64G Y119L Q176K",4
"lib1","SARS-CoV-2","TAAATACAATCGAGCC",1,8.38,10.75,-0.02,0.14,2.92,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAAATACACAACGTTC",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y L95R",2
"lib1","SARS-CoV-2","TAAATACACAGATTTT",2,52.04,10.81,0.04,0.08,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATACATAGCATTA",2,63.95,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44M N107R N118Q D137M P177V",5
"lib1","SARS-CoV-2","TAAATACATTCTACGA",1,10.91,10.74,-0.03,0.12,2.82,1.07,0.01,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","TAAATACATTTCATAC",3,0.37,NA,NA,NA,NA,NA,NA,"stop","G74E L125Q T201*",3
"lib1","SARS-CoV-2","TAAATACCACCCTGCG",2,24.92,9.48,-1.28,0.16,1.8,1.15,0.01,">1 nonsynonymous","C31N N109K S129W P197Q",4
"lib1","SARS-CoV-2","TAAATACCGCTACACA",3,31.83,10.11,-0.65,0.1,2.53,1.1,0,">1 nonsynonymous","S41L N107C",2
"lib1","SARS-CoV-2","TAAATACCTAGATAAG",2,21.29,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","A81I I138L G146A G152C",4
"lib1","SARS-CoV-2","TAAATACCTATATAGC",2,15.19,7.61,-3.15,0.46,1.89,1.38,0.07,">1 nonsynonymous","N92Y F99V N110C P149F L162R",5
"lib1","SARS-CoV-2","TAAATACCTTATATAA",1,46.16,10.45,-0.31,0.07,2.81,1.07,0,">1 nonsynonymous","T55N V65M L122G N151I",4
"lib1","SARS-CoV-2","TAAATACGAGCCTGGC",5,41.59,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19M C150F G152V",3
"lib1","SARS-CoV-2","TAAATACGGGTTCCCA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K N120C S139M",3
"lib1","SARS-CoV-2","TAAATACTATAGACGT",3,1.43,NA,NA,NA,NA,NA,NA,"stop","N4P Q176*",2
"lib1","SARS-CoV-2","TAAATACTCGAAATTG",6,0.22,NA,NA,NA,NA,NA,NA,"stop","G83I I88S I138*",3
"lib1","SARS-CoV-2","TAAATACTTACGCATA",3,12.73,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T15R F70Q D90S",3
"lib1","SARS-CoV-2","TAAATACTTGATAAAA",4,106.23,10.77,0,0.07,2.85,1.05,0,">1 nonsynonymous","P54F T100Y",2
"lib1","SARS-CoV-2","TAAATACTTGTCACAT",3,13.7,10.24,-0.52,0.18,2.68,1.04,0.02,">1 nonsynonymous","T55Y K94N",2
"lib1","SARS-CoV-2","TAAATAGAAAAAGGCT",5,1464.14,6,-4.76,0.88,1.5,1.17,0.01,">1 nonsynonymous","R27G D68M K87M",3
"lib1","SARS-CoV-2","TAAATAGAAAAATCTA",1,25.29,9.23,-1.53,0.17,2.62,1.15,0.01,">1 nonsynonymous","T100L Q176L",2
"lib1","SARS-CoV-2","TAAATAGAAAAGTATC",7,0.67,NA,NA,NA,NA,NA,NA,"stop","C6W F12N D75E N107P S184I S200*",6
"lib1","SARS-CoV-2","TAAATAGAAAGCCACT",2,10.29,7.24,-3.52,0.21,1.5,1.15,0.01,">1 nonsynonymous","S41A C61D I88V Y123C G146S A190T",6
"lib1","SARS-CoV-2","TAAATAGAAATGATAA",13,183.07,10.41,-0.36,0.03,2.93,1,0,">1 nonsynonymous","P54S A145T",2
"lib1","SARS-CoV-2","TAAATAGAATAGATTG",1,10.58,10.06,-0.7,0.06,3,1.01,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","TAAATAGACGTGTTCT",2,47.72,9.67,-1.09,0.08,2.86,1.09,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","TAAATAGACTTAAAAC",6,96.73,8.68,-2.09,0.2,1.54,1.19,0.01,">1 nonsynonymous","W23K Q84M",2
"lib1","SARS-CoV-2","TAAATAGAGGATGCTC",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* R136F",2
"lib1","SARS-CoV-2","TAAATAGATAGCACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V A33R A42P Y123*",4
"lib1","SARS-CoV-2","TAAATAGATTGACTTT",2,11.37,10.7,-0.06,0.11,2.84,1.12,0,"1 nonsynonymous","A14R",1
"lib1","SARS-CoV-2","TAAATAGCAATCTCGG",1,17.74,10.56,-0.2,0.09,2.9,1.08,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","TAAATAGCACGATCGT",4,0.57,NA,NA,NA,NA,NA,NA,"stop","I2A C31K C61R D68* F99R Q163I P169H",7
"lib1","SARS-CoV-2","TAAATAGCATAGTGTG",1,10.24,6,-4.76,2,3,1.05,0,">1 nonsynonymous","F44L I80G F99Y S129A S139H P149Q",6
"lib1","SARS-CoV-2","TAAATAGCATTCAAAG",4,76.84,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N92Y C150V P169I P177E",4
"lib1","SARS-CoV-2","TAAATAGGCATATTGC",4,79.48,10.5,-0.26,0.04,2.91,1.01,0,">1 nonsynonymous","N4R T15R T201C",3
"lib1","SARS-CoV-2","TAAATAGGTCAGTGAT",5,59.28,8.59,-2.17,0.16,1.5,1.12,0.01,">1 nonsynonymous","G9Q P82L K132R Y178F",4
"lib1","SARS-CoV-2","TAAATAGTAGAATTGG",4,539.9,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12V C61P L95Q F99E",4
"lib1","SARS-CoV-2","TAAATAGTTGCCTGAA",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D K56G V77N Y121I",4
"lib1","SARS-CoV-2","TAAATAGTTGTGAGAG",3,5.45,10.79,0.02,0.39,2.85,1,0.01,"1 nonsynonymous","S29C",1
"lib1","SARS-CoV-2","TAAATAGTTTCCGACG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","A42V G146*",2
"lib1","SARS-CoV-2","TAAATATAAAAACTTT",5,49.69,7.72,-3.05,0.19,1.53,1.09,0.01,">1 nonsynonymous","K48M D59E Q176W",3
"lib1","SARS-CoV-2","TAAATATAAATTCAGC",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R Y35C",2
"lib1","SARS-CoV-2","TAAATATAAGAATAAA",3,97.74,9.74,-1.03,0.06,2.79,1.05,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","TAAATATAATAAATCA",6,8.65,7.05,-3.72,0.44,1.5,1,0.05,">1 nonsynonymous","L5T S41T V182N",3
"lib1","SARS-CoV-2","TAAATATACAACATGG",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50P Q84F Y119L Y143V T201R",5
"lib1","SARS-CoV-2","TAAATATACATTAGCA",1,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V G101L",2
"lib1","SARS-CoV-2","TAAATATACCTATAAC",3,87.34,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K26V V37A G86N Y121D",4
"lib1","SARS-CoV-2","TAAATATATAGCAGCC",1,40.09,6.08,-4.68,0.88,1.5,1.16,0.02,">1 nonsynonymous","P7Y A22S D90T Q176I",4
"lib1","SARS-CoV-2","TAAATATATTGCAAGG",10,88.32,7.94,-2.82,0.28,1.5,1.07,0.02,">1 nonsynonymous","F44Y P177G",2
"lib1","SARS-CoV-2","TAAATATCTCCAATTC",1,33.69,7.54,-3.22,0.27,1.5,1.12,0.02,">1 nonsynonymous","V52D D97K K128C",3
"lib1","SARS-CoV-2","TAAATATCTTGAAAGT",3,67.24,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","D68V P161D Y175L",3
"lib1","SARS-CoV-2","TAAATATGAATTGCCT",1,3.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","TAAATATGACGAGAGC",3,28.54,6,-4.76,1.9,3,1.28,0.01,">1 nonsynonymous","T63M S184P",2
"lib1","SARS-CoV-2","TAAATATGCACATAAC",1,44.04,10.66,-0.11,0.03,2.97,1,0,"1 nonsynonymous","A14N",1
"lib1","SARS-CoV-2","TAAATATGCATTGTTA",1,24.22,10.82,0.05,0.06,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATATGCATTTTAT",4,74.5,6,-4.76,1.26,1.5,1.22,0.02,">1 nonsynonymous","S69V Y123E",2
"lib1","SARS-CoV-2","TAAATATGGCAAAGAT",4,45.96,10.28,-0.49,0.08,2.8,1.13,0,">1 nonsynonymous","T148Y G152R",2
"lib1","SARS-CoV-2","TAAATATGGTACCTGT",4,58.39,10.83,0.07,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATATGGTTCCCAA",4,79.26,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","E10Y F47C F62R A105C F160G Q176R",6
"lib1","SARS-CoV-2","TAAATATGTCATACTA",4,36.24,6.04,-4.72,0.81,1.5,1.17,0.01,">1 nonsynonymous","A14M Q144C F160I Y165I",4
"lib1","SARS-CoV-2","TAAATATTACGCATAA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","A14D T100* N118P T170A A190S",5
"lib1","SARS-CoV-2","TAAATATTCGCCCCTT",1,5.55,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","S45N A105K S139Y P149A P161R",5
"lib1","SARS-CoV-2","TAAATATTTCATCCCC",1,16.42,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","N4D D68R G196N",3
"lib1","SARS-CoV-2","TAAATATTTGCAGGTT",1,21.29,10.74,-0.02,0.09,2.95,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATCAAATAAGAAA",1,54.58,8.93,-1.84,0.14,2.69,1.18,0.01,"1 nonsynonymous","Y143E",1
"lib1","SARS-CoV-2","TAAATCAAATATACCA",2,324.97,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L38G T55R C61N N118T R136S K199N",6
"lib1","SARS-CoV-2","TAAATCAAATATCAAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","I2Y S147T T201*",3
"lib1","SARS-CoV-2","TAAATCAACACATTAC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","N130*",1
"lib1","SARS-CoV-2","TAAATCAATAAAATCT",4,73,6.28,-4.48,0.54,1.5,1.13,0.01,">1 nonsynonymous","A33L S43E L95Q",3
"lib1","SARS-CoV-2","TAAATCAATTAGATAT",3,2.38,NA,NA,NA,NA,NA,NA,"stop","L5P C61*",2
"lib1","SARS-CoV-2","TAAATCACAAAATAAA",2,22.06,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N40G C49I D68L G86N K94S S139N A192K",7
"lib1","SARS-CoV-2","TAAATCACAAACAAAT",3,5.69,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","G51D N107W R127T V181P",4
"lib1","SARS-CoV-2","TAAATCACAAACTCCG",13,190.1,10.54,-0.22,0.03,2.9,1.06,0,"1 nonsynonymous","A33Y",1
"lib1","SARS-CoV-2","TAAATCACACACTCTA",5,69.69,7.68,-3.08,0.27,1.5,1.01,0.03,">1 nonsynonymous","E10S K56F S69V",3
"lib1","SARS-CoV-2","TAAATCACCACTCAAT",3,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N V103N D137K T201K",4
"lib1","SARS-CoV-2","TAAATCACCGTGAAGT",3,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83W Q144L",2
"lib1","SARS-CoV-2","TAAATCACGATAAAAC",10,125.47,9.82,-0.95,0.07,2.61,1.07,0,">1 nonsynonymous","G83Y S129A G155L",3
"lib1","SARS-CoV-2","TAAATCACTAACTTTT",1,4.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","TAAATCACTATATCTG",3,106.03,8.65,-2.11,0.09,2.94,1.02,0,"1 nonsynonymous","G166D",1
"lib1","SARS-CoV-2","TAAATCAGAGGTCTAC",7,83.18,10.13,-0.63,0.09,2.53,1.01,0,">1 nonsynonymous","G9L S43D K94A",3
"lib1","SARS-CoV-2","TAAATCAGCTAATTTT",1,102.31,10.03,-0.74,0.05,2.84,1.06,0,">1 nonsynonymous","C6V I138V I142L",3
"lib1","SARS-CoV-2","TAAATCAGCTCAAGTT",5,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I S147C",2
"lib1","SARS-CoV-2","TAAATCATAATAAGCA",2,22.76,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C6Y P161L",2
"lib1","SARS-CoV-2","TAAATCATCAATAATG",3,133.34,10.8,0.04,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATCATCTCAACCG",3,41.19,9.37,-1.4,0.1,2.51,1.12,0,">1 nonsynonymous","L38H T55Q K87L",3
"lib1","SARS-CoV-2","TAAATCATTCAAGGTT",2,29.71,8.42,-2.34,0.27,1.99,1.11,0.03,">1 nonsynonymous","D112L Y123R S200A",3
"lib1","SARS-CoV-2","TAAATCCACTAATGGA",1,48.47,10.82,0.05,0.05,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAATCCAGCAGTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G I138M",2
"lib1","SARS-CoV-2","TAAATCCATATGACAT",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M L95P Y165H",3
"lib1","SARS-CoV-2","TAAATCCATGCATAAT",2,9.43,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","T3V A42T D98V D137P V181L",5
"lib1","SARS-CoV-2","TAAATCCCGGGACATG",3,12.74,6.3,-4.46,0.67,1.5,1.04,0.02,">1 nonsynonymous","D59V A67P",2
"lib1","SARS-CoV-2","TAAATCCCTGACAGAA",4,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P D59V Y119L R136P",4
"lib1","SARS-CoV-2","TAAATCCGCAACATTT",1,54.21,10.78,0.01,0.05,2.87,1.06,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","TAAATCCGCATGGTAA",7,73.48,8.68,-2.08,0.15,2.22,1.13,0.01,">1 nonsynonymous","W106S L125T E141K T201S",4
"lib1","SARS-CoV-2","TAAATCCGTTCCCAGT",2,11.41,10.95,0.19,0.06,3,1.01,0,"1 nonsynonymous","G196M",1
"lib1","SARS-CoV-2","TAAATCCTACTTAGAG",9,111.75,6,-4.76,1.4,1.5,1.26,0.03,">1 nonsynonymous","F8L K132V T148K V180F",4
"lib1","SARS-CoV-2","TAAATCCTCACTAGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S D90T V103R P149W",4
"lib1","SARS-CoV-2","TAAATCCTGCTGGTCT",1,2.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160V",1
"lib1","SARS-CoV-2","TAAATCGAAATACACG",4,10.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38T G83W D97S G101V Y121E C150V",6
"lib1","SARS-CoV-2","TAAATCGACGAGGCCG",1,75.21,8.71,-2.06,0.12,1.71,1.16,0.01,">1 nonsynonymous","K94N Q176H",2
"lib1","SARS-CoV-2","TAAATCGATATCTTAG",1,11.91,6.45,-4.32,0.56,2.95,1.05,0,">1 nonsynonymous","S19L R27P Q144N",3
"lib1","SARS-CoV-2","TAAATCGATGGTTAGA",2,21.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V77M D98K L162C",3
"lib1","SARS-CoV-2","TAAATCGATTAAACTG",2,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63M P96E",2
"lib1","SARS-CoV-2","TAAATCGCGAAAGAAG",7,74.29,10.86,0.1,0.08,2.96,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAATCGTACGCCTTC",2,69.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37M E76T N92M S113G",4
"lib1","SARS-CoV-2","TAAATCTAACACAATA",1,36.7,10.31,-0.45,0.09,2.71,1.01,0,">1 nonsynonymous","R16V K87S E141F",3
"lib1","SARS-CoV-2","TAAATCTACGATAACC",5,3.84,NA,NA,NA,NA,NA,NA,"stop","T140* P169A",2
"lib1","SARS-CoV-2","TAAATCTCAGATCTCT",6,59.32,10.57,-0.2,0.04,2.9,1.01,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","TAAATCTCCCACCCCA",3,18.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5R V52R G86R T201R",4
"lib1","SARS-CoV-2","TAAATCTCCTAAAAGT",1,9.76,9.92,-0.85,0.09,2.74,1.02,0,">1 nonsynonymous","L122V R127S",2
"lib1","SARS-CoV-2","TAAATCTCGCACAAAG",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W D90K K198T",3
"lib1","SARS-CoV-2","TAAATCTGGGACCCGA",4,93.84,9.38,-1.38,0.11,1.59,1.08,0,">1 nonsynonymous","C61D V173T",2
"lib1","SARS-CoV-2","TAAATCTGTTAATAAC",9,109.09,10.39,-0.37,0.05,2.89,1.01,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","TAAATCTTCAATTTCA",1,3.92,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAAATGAAAATTTCGC",4,28.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139G P177N",2
"lib1","SARS-CoV-2","TAAATGAAAATTTGCA",1,92.31,10.49,-0.27,0.06,2.9,1.02,0,">1 nonsynonymous","T100K Y178N",2
"lib1","SARS-CoV-2","TAAATGAAACAAACCA",5,22.32,10.78,0.01,0.08,2.93,1.05,0,">1 nonsynonymous","Y91F G196L",2
"lib1","SARS-CoV-2","TAAATGAAACACATGA",1,141.78,10.76,-0.01,0.08,2.86,1.09,0,"1 nonsynonymous","V153G",1
"lib1","SARS-CoV-2","TAAATGAACCTTTCCT",6,65.32,10.71,-0.05,0.1,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATGAAGAATAAAT",2,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E D34L A105P",3
"lib1","SARS-CoV-2","TAAATGAAGGGAAAAT",6,1.12,NA,NA,NA,NA,NA,NA,"stop","Y35E Y119* L183R",3
"lib1","SARS-CoV-2","TAAATGACAAAAGGTT",11,62.48,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","TAAATGACAGATATGT",1,18.78,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G86L F126D I138A K198V",4
"lib1","SARS-CoV-2","TAAATGACCAAACCTG",1,17.71,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S45L N92M C158W V173H",4
"lib1","SARS-CoV-2","TAAATGACTGGGGCGG",1,10.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y91M G101Y G155I",3
"lib1","SARS-CoV-2","TAAATGAGAAAAACCA",8,123.99,10.88,0.11,0.05,2.89,1.04,0,">1 nonsynonymous","Q84V S164K",2
"lib1","SARS-CoV-2","TAAATGAGAATTTCTG",1,27.05,10.75,-0.02,0.06,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATGAGAGAGATGG",2,22.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A89T P96R A105T P149I",4
"lib1","SARS-CoV-2","TAAATGAGAGGTATCA",1,29.09,10.06,-0.71,0.08,2.67,1.09,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","TAAATGAGGGCACTAT",5,41.54,6,-4.76,0.93,1.5,1.13,0.01,">1 nonsynonymous","Y123A R127G Y178C",3
"lib1","SARS-CoV-2","TAAATGATATACCCTC",2,53.32,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","I2E N58A D112Q Y165S",4
"lib1","SARS-CoV-2","TAAATGATATACTTCA",4,0,NA,NA,NA,NA,NA,NA,"stop","R16P K26C K114*",3
"lib1","SARS-CoV-2","TAAATGATATTTGCCT",4,43.86,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Y119A G146L",2
"lib1","SARS-CoV-2","TAAATGATCACGGACC",2,21.99,8.38,-2.39,0.45,1.5,1.14,0.06,">1 nonsynonymous","Q84R A89K S147N",3
"lib1","SARS-CoV-2","TAAATGATCTGTGCCA",2,2.42,NA,NA,NA,NA,NA,NA,"stop","V77* N110R F160G",3
"lib1","SARS-CoV-2","TAAATGATGAAATCAT",1,65.36,10.7,-0.07,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATGATTCACATCG",7,101.57,10.7,-0.07,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATGATTTCTTTAT",12,149.68,10.54,-0.23,0.06,2.92,1.02,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","TAAATGCAAGGATAGG",3,12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D T55Q S113M",3
"lib1","SARS-CoV-2","TAAATGCAATCTTGGC",6,0.17,NA,NA,NA,NA,NA,NA,"stop","F47S K114* L131Q",3
"lib1","SARS-CoV-2","TAAATGCACTGAAAGC",4,65.33,10.78,0.01,0.07,2.93,1,0,"1 nonsynonymous","P7E",1
"lib1","SARS-CoV-2","TAAATGCAGCAAATCT",2,12.7,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D68S I80Q L95C P133S",4
"lib1","SARS-CoV-2","TAAATGCATGCCATTG",3,84.63,10.49,-0.28,0.03,2.84,1.01,0,">1 nonsynonymous","Y35P T55S T201Q",3
"lib1","SARS-CoV-2","TAAATGCCATGAGGTA",1,39.96,6,-4.76,1.35,1.5,1.16,0.02,">1 nonsynonymous","N1T V71C Y91V",3
"lib1","SARS-CoV-2","TAAATGCCCCCAGAAC",1,9.68,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3L R27L D97T G117R E141L",5
"lib1","SARS-CoV-2","TAAATGCCCCTACTAT",14,62.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16S D34Y I80S",3
"lib1","SARS-CoV-2","TAAATGCCGAGAACTT",5,62.05,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C49V I80S N92R Y119S",4
"lib1","SARS-CoV-2","TAAATGCCGGTTGCTA",6,0.36,NA,NA,NA,NA,NA,NA,"stop","V32K D97F K132*",3
"lib1","SARS-CoV-2","TAAATGCGCGAGCAAC",4,30.9,8.95,-1.81,0.06,2.9,1.05,0,">1 nonsynonymous","G9H T55Y D98I S164T T170N",5
"lib1","SARS-CoV-2","TAAATGCGTAGAATAG",3,22.98,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P82K D90H E135M I142T",4
"lib1","SARS-CoV-2","TAAATGCTAAAACCGA",2,5.19,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14F K87T C102G R124H",4
"lib1","SARS-CoV-2","TAAATGCTAATGAGTT",3,119.87,8.36,-2.41,0.26,1.5,1.07,0.03,">1 nonsynonymous","R25C T55N L95I",3
"lib1","SARS-CoV-2","TAAATGCTGAATCTCT",5,69.86,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","F99G N107S P149S V173R",4
"lib1","SARS-CoV-2","TAAATGCTGTTGTACT",4,75.03,10.47,-0.29,0.05,2.91,1.03,0,">1 nonsynonymous","G9K Y39E S45D S53R",4
"lib1","SARS-CoV-2","TAAATGCTTGGGACTT",6,21.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61L D90W V103D",3
"lib1","SARS-CoV-2","TAAATGGAAACTGTTC",4,21.17,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11F V20R A89C N107V E135P P149R P169S",7
"lib1","SARS-CoV-2","TAAATGGAACCAAATA",5,73.49,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","R25I A105N N120L K128F",4
"lib1","SARS-CoV-2","TAAATGGAAGTTACGT",3,24.76,10.58,-0.19,0.07,2.88,1.02,0,">1 nonsynonymous","L131M V153F",2
"lib1","SARS-CoV-2","TAAATGGAATCGCTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E F47K F99S K198G",4
"lib1","SARS-CoV-2","TAAATGGACCGATTCC",2,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W Y35A C49W T55I P82K R127H",6
"lib1","SARS-CoV-2","TAAATGGAGACACAGA",1,8.11,NA,NA,NA,NA,NA,NA,"stop","Y50V V103* V115D Y121S D137E Q176M",6
"lib1","SARS-CoV-2","TAAATGGAGGAAAAAT",2,0.8,NA,NA,NA,NA,NA,NA,"stop","L5P T85K F126D P169*",4
"lib1","SARS-CoV-2","TAAATGGCAGAAATAT",10,89.31,8.78,-1.99,0.15,1.64,1.17,0.01,">1 nonsynonymous","A14W C31A",2
"lib1","SARS-CoV-2","TAAATGGGAAAAACCT",13,186.91,10.67,-0.1,0.04,2.9,1.05,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","TAAATGGGACACGTAT",3,46.3,8.84,-1.92,0.22,1.59,1.21,0.02,">1 nonsynonymous","I28T N151I",2
"lib1","SARS-CoV-2","TAAATGGGCCCCACCA",4,20.43,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","T3Q R27V V37K I88Y",4
"lib1","SARS-CoV-2","TAAATGGGTTCCCCAA",7,35.66,6.16,-4.6,0.74,1.5,1.16,0.02,">1 nonsynonymous","V11G Y91T",2
"lib1","SARS-CoV-2","TAAATGGGTTTGGTTA",1,17.41,9.62,-1.14,0.26,1.98,1.2,0.04,">1 nonsynonymous","R136T G155T",2
"lib1","SARS-CoV-2","TAAATGGTAATTAACA",2,9.35,10.2,-0.56,0.15,2.83,1.06,0.01,">1 nonsynonymous","G152S P191W",2
"lib1","SARS-CoV-2","TAAATGGTCTTCATAT",2,10.78,10.87,0.1,0.08,2.91,1.05,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","TAAATGTAAGTTAGGA",9,67.07,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y93W S113G F126P",3
"lib1","SARS-CoV-2","TAAATGTATGCAAAAT",1,15.56,10.88,0.11,0.09,2.89,1.1,0,">1 nonsynonymous","L5Q R136K",2
"lib1","SARS-CoV-2","TAAATGTCCCACAACA",6,181.9,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C6V F126G C158R Q176H K199I",5
"lib1","SARS-CoV-2","TAAATGTCGCGTACCG",9,146.11,9.21,-1.56,0.06,2.31,1.11,0,">1 nonsynonymous","F17Y S41R C61V Y123R",4
"lib1","SARS-CoV-2","TAAATGTCGTCCGATA",6,135.04,10.6,-0.16,0.04,2.96,1.02,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","TAAATGTCTCACACAT",11,125.91,6,-4.76,0.87,1.5,1.17,0.01,">1 nonsynonymous","V11T K114P E154W",3
"lib1","SARS-CoV-2","TAAATGTGCGTCAGGC",7,280.87,10.2,-0.56,0.05,2.58,1.01,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","TAAATGTGGTTAATAT",4,57.38,10.42,-0.34,0.03,2.95,1.02,0,">1 nonsynonymous","C61F V173N",2
"lib1","SARS-CoV-2","TAAATGTTAAATGAGC",4,109.09,10.23,-0.53,0.03,2.95,1.01,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","TAAATGTTCACAAAAA",3,37.05,10.45,-0.32,0.09,2.82,1.06,0,">1 nonsynonymous","S36R L122G Q144G",3
"lib1","SARS-CoV-2","TAAATGTTTAAAATTA",1,57.55,10.68,-0.08,0.05,2.95,1.05,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TAAATTAAAAAAAGAA",1,17.88,6,-4.76,2,2.88,1.09,0,">1 nonsynonymous","P82M T85M F134T",3
"lib1","SARS-CoV-2","TAAATTAAAGGATTAA",3,20.98,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","K87S Y123V G146F",3
"lib1","SARS-CoV-2","TAAATTAACACAGGTT",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88H D98R P149Y G155A",4
"lib1","SARS-CoV-2","TAAATTAACTAAAGTA",4,0.82,NA,NA,NA,NA,NA,NA,"stop","F17W Y35F I72M N120* V173L A192S",6
"lib1","SARS-CoV-2","TAAATTAATGATTAAT",1,28.32,10.77,0,0.06,2.87,1.07,0,"1 nonsynonymous","D97A",1
"lib1","SARS-CoV-2","TAAATTAATTAACAAC",4,35.88,9.5,-1.27,0.18,1.66,1.2,0.02,">1 nonsynonymous","F44S S129M P191L",3
"lib1","SARS-CoV-2","TAAATTAATTTTACAC",2,35.4,10.07,-0.69,0.08,2.87,1,0,">1 nonsynonymous","D97N Y143L",2
"lib1","SARS-CoV-2","TAAATTACCAATAGTT",3,19.08,6.23,-4.53,0.84,1.5,1.29,0.04,">1 nonsynonymous","D90V G146M",2
"lib1","SARS-CoV-2","TAAATTACGTGATTAC",5,17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D W106S",2
"lib1","SARS-CoV-2","TAAATTAGAAATGTAA",5,39.65,8.62,-2.15,0.2,1.5,1.13,0.02,">1 nonsynonymous","T148R F185N",2
"lib1","SARS-CoV-2","TAAATTAGACAGCATC",7,164.66,10.8,0.04,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATTAGACCACTGA",2,8.75,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F12W K94G E154P G174V A192F",5
"lib1","SARS-CoV-2","TAAATTAGCAGCCACC",1,21.43,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F44I R73V P149E Q176R",4
"lib1","SARS-CoV-2","TAAATTAGCTAAGTGA",1,2.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S45E",1
"lib1","SARS-CoV-2","TAAATTAGGTTAAACA",3,66.53,6.27,-4.49,0.54,1.5,1.17,0.02,">1 nonsynonymous","F62M C150F",2
"lib1","SARS-CoV-2","TAAATTAGTACACGAT",7,94.34,10.81,0.05,0.08,2.9,1.05,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","TAAATTATAAAGTTTG",7,127.03,8.35,-2.42,0.14,2.73,1.05,0.01,">1 nonsynonymous","P96S Q168K",2
"lib1","SARS-CoV-2","TAAATTATAATCCGAT",4,40.93,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P82T L131A I142V",3
"lib1","SARS-CoV-2","TAAATTATTAATTGCT",3,50.38,9.79,-0.97,0.11,1.98,1.03,0,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","TAAATTATTGATCGGG",5,0.6,NA,NA,NA,NA,NA,NA,"stop","N4I L60V P82* L183F",4
"lib1","SARS-CoV-2","TAAATTATTTTGACAT",5,20.36,10.2,-0.56,0.06,2.95,1,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","TAAATTCAAACCAAAT",4,54.26,9.14,-1.62,0.1,2.88,1.11,0,"1 nonsynonymous","G117V",1
"lib1","SARS-CoV-2","TAAATTCAACATTTAC",1,6.15,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","A42V Y50D C61R D90E Y91V",5
"lib1","SARS-CoV-2","TAAATTCAGAGTCGGG",10,152,10.22,-0.54,0.05,2.88,1.01,0,">1 nonsynonymous","T3C K48L K87I",3
"lib1","SARS-CoV-2","TAAATTCCAACCATTA",1,11.96,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R25Q S113L N130G V180Q",4
"lib1","SARS-CoV-2","TAAATTCCCATGTTAA",4,68.23,8.72,-2.05,0.36,1.5,1.13,0.05,">1 nonsynonymous","P96A D137S",2
"lib1","SARS-CoV-2","TAAATTCCGAAAAGGA",4,27.76,10.82,0.05,0.08,2.97,1.03,0,"1 nonsynonymous","R27L",1
"lib1","SARS-CoV-2","TAAATTCCTCACCGCT",6,112.78,10.8,0.04,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATTCGACTAATAT",1,0.88,NA,NA,NA,NA,NA,NA,"stop","R27C Y50* G74F",3
"lib1","SARS-CoV-2","TAAATTCGATCTCCAA",1,51.29,10.5,-0.27,0.04,2.96,1,0,">1 nonsynonymous","G9F F134G L188I",3
"lib1","SARS-CoV-2","TAAATTCGCAATGACT",2,3.37,NA,NA,NA,NA,NA,NA,"stop","L95M D97S V103E S113W Y119* C158L",6
"lib1","SARS-CoV-2","TAAATTCTAAGACAAA",3,19,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","N92V L122T R136L",3
"lib1","SARS-CoV-2","TAAATTCTAGAAAGAC",13,117.79,10.69,-0.07,0.04,2.94,1.03,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TAAATTCTTAACAGAA",3,45.54,8.75,-2.01,0.23,1.5,1.19,0.03,">1 nonsynonymous","F8P P54T L95V V173R",4
"lib1","SARS-CoV-2","TAAATTGAACGGATTT",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R V103G H189Y",3
"lib1","SARS-CoV-2","TAAATTGAATATTCAT",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130L P149M",2
"lib1","SARS-CoV-2","TAAATTGAATCCCCAT",6,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D N92S",2
"lib1","SARS-CoV-2","TAAATTGAATGCGATG",3,62.29,7.49,-3.27,0.27,1.5,1.1,0.02,">1 nonsynonymous","C61A Y93I",2
"lib1","SARS-CoV-2","TAAATTGAATGCTTGT",13,59.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A81Y D97K K132Y Q144K V180T",5
"lib1","SARS-CoV-2","TAAATTGAATTTAAAC",1,14.44,10.59,-0.18,0.11,2.79,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATTGACTCACATT",9,77.97,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A105S F167L G172T",3
"lib1","SARS-CoV-2","TAAATTGCTGTTTAAA",5,57.21,10.53,-0.23,0.06,2.92,1.03,0,">1 nonsynonymous","D90N L122G G174R",3
"lib1","SARS-CoV-2","TAAATTGGTCCTTTTG",1,25.52,10.9,0.14,0.1,2.95,1,0.01,">1 nonsynonymous","C61R N120K",2
"lib1","SARS-CoV-2","TAAATTGTATCTCACC",2,36.22,10.48,-0.28,0.06,2.97,1.02,0,">1 nonsynonymous","A22S K56T T85E",3
"lib1","SARS-CoV-2","TAAATTGTGATAAAAT",4,22.23,7.19,-3.58,0.36,2.08,1.13,0.04,"1 nonsynonymous","N107F",1
"lib1","SARS-CoV-2","TAAATTTAAAATTATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","TAAATTTAAATCTTAC",4,92.61,8.31,-2.46,0.17,2,1.19,0.01,"1 nonsynonymous","Q176I",1
"lib1","SARS-CoV-2","TAAATTTAACATGAGT",4,2.39,NA,NA,NA,NA,NA,NA,"stop","T46* S200C",2
"lib1","SARS-CoV-2","TAAATTTAACCCTACT",3,26.01,6.52,-4.25,0.28,1.5,1.15,0.01,">1 nonsynonymous","S19L S43Y T140L S184G",4
"lib1","SARS-CoV-2","TAAATTTAATCAAGTA",4,15.88,6.28,-4.49,0.87,1.5,1.05,0.05,">1 nonsynonymous","A42T L60Y V181K",3
"lib1","SARS-CoV-2","TAAATTTACCACCCAG",1,34.03,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y35T G86R P149Q",3
"lib1","SARS-CoV-2","TAAATTTACTGCTGTA",3,92.46,10.75,-0.01,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAATTTAGTTTTTCA",2,60.28,8.52,-2.25,0.16,2.09,1.09,0.01,">1 nonsynonymous","R16V Q176W",2
"lib1","SARS-CoV-2","TAAATTTATTCATCAT",3,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M S113K P177Y",3
"lib1","SARS-CoV-2","TAAATTTCCAAGTTTT",9,35.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S R179L K198L",3
"lib1","SARS-CoV-2","TAAATTTGATAAAGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1R P7C R25* Y66S A105W",5
"lib1","SARS-CoV-2","TAAATTTGGAAGGACA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","F8* F134R N157G",3
"lib1","SARS-CoV-2","TAAATTTTCATAGAAT",4,98.51,10.52,-0.24,0.04,2.94,1.02,0,">1 nonsynonymous","N120D S129K S164L",3
"lib1","SARS-CoV-2","TAAATTTTCCGACTAC",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E S139P V173L",3
"lib1","SARS-CoV-2","TAAATTTTGAACTCTT",3,27.23,10.86,0.1,0.09,2.88,1.07,0,"1 nonsynonymous","E154T",1
"lib1","SARS-CoV-2","TAACAAAAAAGCGTAT",1,7.31,6.64,-4.12,0.72,1.5,1.19,0.06,">1 nonsynonymous","Y35W N64H D97L L131H E141K Q168R Y178R",7
"lib1","SARS-CoV-2","TAACAAAAACCATCAA",3,50.92,10.44,-0.33,0.04,2.92,1,0,">1 nonsynonymous","T55A D90L C195Y",3
"lib1","SARS-CoV-2","TAACAAAAACCCGTGT",1,2.43,NA,NA,NA,NA,NA,NA,"stop","G101S I104S P149C T201*",4
"lib1","SARS-CoV-2","TAACAAAAAGAAGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* A42Y V71R L183G",4
"lib1","SARS-CoV-2","TAACAAAAATACTGCT",1,10.46,10.51,-0.26,0.2,2.85,1.13,0.02,">1 nonsynonymous","V37S E141G V173F",3
"lib1","SARS-CoV-2","TAACAAAAATTAGATT",8,30.33,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4E A89L N130R G152L",4
"lib1","SARS-CoV-2","TAACAAAACAATTATT",7,114.98,10.71,-0.06,0.03,2.94,1.02,0,"1 nonsynonymous","G116K",1
"lib1","SARS-CoV-2","TAACAAAACTCACGCA",3,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48H P149I N157V V173Y",4
"lib1","SARS-CoV-2","TAACAAAACTCCCCTT",1,9.91,9.73,-1.04,0.25,1.98,1,0.03,">1 nonsynonymous","V32R S36L S45L",3
"lib1","SARS-CoV-2","TAACAAAACTGTTGAA",1,43.59,10.31,-0.45,0.05,2.9,1,0,"1 nonsynonymous","E186F",1
"lib1","SARS-CoV-2","TAACAAAAGACTTTTA",1,40.11,9.12,-1.65,0.15,1.5,1.05,0.01,">1 nonsynonymous","C6V Y39S S45L",3
"lib1","SARS-CoV-2","TAACAAAAGATTCAAT",2,19.99,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","G116K C150Y",2
"lib1","SARS-CoV-2","TAACAAAAGCTGGAGG",2,39.64,10.39,-0.38,0.04,2.89,1.05,0,"1 nonsynonymous","N13R",1
"lib1","SARS-CoV-2","TAACAAAAGTCGAGGA",1,12.66,10.82,0.06,0.08,2.92,1,0,"1 nonsynonymous","Q84V",1
"lib1","SARS-CoV-2","TAACAAAATAAGCCTC",8,63.73,9.93,-0.83,0.11,2.66,1.08,0,">1 nonsynonymous","C6L T55L",2
"lib1","SARS-CoV-2","TAACAAAATAGCACCA",2,34.53,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15V R124F",2
"lib1","SARS-CoV-2","TAACAAAATAGTATGA",10,43.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62G D68N I80E D98R T170K",5
"lib1","SARS-CoV-2","TAACAAAATCAAGGAT",1,19.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2Y C6R N64T G101S N157G Y165E",6
"lib1","SARS-CoV-2","TAACAAAATTCTTCAA",9,1.75,NA,NA,NA,NA,NA,NA,"stop","C6S S129R P161F R179*",4
"lib1","SARS-CoV-2","TAACAAACAAATTAAA",2,16.66,10.5,-0.26,0.14,2.85,1.09,0.02,"1 nonsynonymous","L95M",1
"lib1","SARS-CoV-2","TAACAAACAACATTCA",5,1.66,NA,NA,NA,NA,NA,NA,"stop","T55C C61* F70H V103D I138S",5
"lib1","SARS-CoV-2","TAACAAACTGATAAGT",3,0.92,NA,NA,NA,NA,NA,NA,"stop","S45L S113* E135L",3
"lib1","SARS-CoV-2","TAACAAAGAACAATCA",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94N D112N C150E",3
"lib1","SARS-CoV-2","TAACAAAGACCTTATA",12,330.21,8.65,-2.12,0.08,2.47,1.09,0,">1 nonsynonymous","P7T G117L Y121H",3
"lib1","SARS-CoV-2","TAACAAAGAGGGACAA",2,25.17,10.59,-0.18,0.07,2.97,1.03,0,">1 nonsynonymous","N120A F160I",2
"lib1","SARS-CoV-2","TAACAAAGGCAAGCGT",3,12.25,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Y66A N92M Y123L",3
"lib1","SARS-CoV-2","TAACAAAGGGGAAATG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","G9Y D34G K132* C150I Q163S",5
"lib1","SARS-CoV-2","TAACAAAGTTACACTA",2,32,6.06,-4.71,0.8,2.02,1.11,0.01,">1 nonsynonymous","S41C I72R I104Y",3
"lib1","SARS-CoV-2","TAACAAATAAACATTT",4,66.96,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R25M F134S",2
"lib1","SARS-CoV-2","TAACAAATAACATAAG",2,105.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N30V A42Q K87P S147Y G172N",5
"lib1","SARS-CoV-2","TAACAAATAACGACTG",3,36.47,9.05,-1.72,0.07,2.7,1.12,0,">1 nonsynonymous","L5E G116M G166C",3
"lib1","SARS-CoV-2","TAACAAATCATATTTA",1,22.64,9.88,-0.89,0.11,2.55,1,0.01,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","TAACAAATCCATCAAT",4,16.43,10.75,-0.01,0.05,2.94,1.06,0,">1 nonsynonymous","A22S F160C",2
"lib1","SARS-CoV-2","TAACAAATGAAGCCCT",5,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A L95V P149S G155F",4
"lib1","SARS-CoV-2","TAACAAATGTACGAAC",2,84.99,8.39,-2.37,0.12,2.09,1.11,0.01,">1 nonsynonymous","S113C Q168K",2
"lib1","SARS-CoV-2","TAACAAATGTGAATAC",15,122.74,8.9,-1.87,0.19,1.5,1.01,0.02,">1 nonsynonymous","K128S L183C",2
"lib1","SARS-CoV-2","TAACAAATTACTGCTG",4,34.54,10.46,-0.3,0.05,2.88,1.02,0,">1 nonsynonymous","V37G P96S",2
"lib1","SARS-CoV-2","TAACAAATTCTACTTA",2,6.78,10.16,-0.61,0.18,2.78,1.13,0.02,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","TAACAACAAAAGAGCA",13,145.35,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41L N92S W106R N120E",4
"lib1","SARS-CoV-2","TAACAACAACCAAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K A89Y",2
"lib1","SARS-CoV-2","TAACAACAAGTTATGA",3,42.79,9.24,-1.52,0.1,2.17,1.08,0,">1 nonsynonymous","G51I G166N",2
"lib1","SARS-CoV-2","TAACAACACACTAGTT",3,26.43,10.62,-0.15,0.08,2.95,1.06,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TAACAACACATTAAAC",5,79.79,7.83,-2.93,0.23,1.53,1.2,0.02,">1 nonsynonymous","C6V F44P A89S L122T",4
"lib1","SARS-CoV-2","TAACAACACGAACACG",1,0,NA,NA,NA,NA,NA,NA,"stop","P54T Q84* R136N",3
"lib1","SARS-CoV-2","TAACAACACGAACCCG",13,0.63,NA,NA,NA,NA,NA,NA,"stop","P54T Q84* R136N",3
"lib1","SARS-CoV-2","TAACAACAGCCGACCA",1,6.82,6,-4.76,1.55,3,1.04,0,">1 nonsynonymous","P7T A33P Q84R V115M G172Y",5
"lib1","SARS-CoV-2","TAACAACATTATCTCA",2,2.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184V",1
"lib1","SARS-CoV-2","TAACAACCAAAAACAC",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G F70G T170Q",3
"lib1","SARS-CoV-2","TAACAACCCTCCGAAA",2,15.82,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","D59L D90L A145V Q176G",4
"lib1","SARS-CoV-2","TAACAACCGCAAAACG",5,97.85,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","E76A N120F R127I P197S",4
"lib1","SARS-CoV-2","TAACAACGACAAAGAT",1,118.43,8.49,-2.28,0.12,2.24,1.14,0,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","TAACAACGCACAAGGT",5,38.02,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","N107W N157L",2
"lib1","SARS-CoV-2","TAACAACGGTCGGTGG",2,18.34,7.69,-3.08,0.61,1.5,1,0.08,">1 nonsynonymous","I2L A105E",2
"lib1","SARS-CoV-2","TAACAACTATAACTCA",2,35.2,9.7,-1.07,0.08,2.84,1.06,0,">1 nonsynonymous","K128P G146N",2
"lib1","SARS-CoV-2","TAACAACTCCACTTGT",1,19.03,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","F12S T46I D59F Y159I T170M",5
"lib1","SARS-CoV-2","TAACAACTGACTGACG",21,125.83,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G83P Y93F S184A",3
"lib1","SARS-CoV-2","TAACAACTGTACAGTA",11,83.38,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I80N N118D S139Y",3
"lib1","SARS-CoV-2","TAACAACTTAAACTAA",2,41.61,10.79,0.03,0.08,2.89,1.04,0,">1 nonsynonymous","G83F T201R",2
"lib1","SARS-CoV-2","TAACAACTTATCGATA",5,74.9,9.68,-1.09,0.22,1.65,1.09,0.02,">1 nonsynonymous","S36P S53T W106K",3
"lib1","SARS-CoV-2","TAACAACTTTGGTGAA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y119* V173L",2
"lib1","SARS-CoV-2","TAACAAGAAAAGCATA",2,45.87,10.03,-0.74,0.1,2.51,1,0,">1 nonsynonymous","K26M T100A K128L",3
"lib1","SARS-CoV-2","TAACAAGAACGTACAA",1,27.96,8.86,-1.91,0.25,1.5,1.01,0.04,">1 nonsynonymous","D68M G83S",2
"lib1","SARS-CoV-2","TAACAAGAAGATTCAA",1,21.72,11.14,0.37,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAAGACATCGAAA",3,32.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E76T F99R",2
"lib1","SARS-CoV-2","TAACAAGACGCTCGGC",1,19.71,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","V37F S45C D75V V103M",4
"lib1","SARS-CoV-2","TAACAAGAGAAATGCA",2,29.3,10.53,-0.24,0.1,2.88,1,0,">1 nonsynonymous","Y50H S129N",2
"lib1","SARS-CoV-2","TAACAAGATACTACCT",2,9.63,6.75,-4.01,0.48,1.73,1.05,0.04,">1 nonsynonymous","P54W C61Y W106L Y123G",4
"lib1","SARS-CoV-2","TAACAAGATCAATGCC",4,104.73,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59L G116L P149H C158N",4
"lib1","SARS-CoV-2","TAACAAGCGAAACCAC",3,41.65,6.36,-4.41,0.82,1.5,1.27,0.04,">1 nonsynonymous","F12M Y93F Y123A",3
"lib1","SARS-CoV-2","TAACAAGGCACGAAAG",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W R73N L95R S129K",4
"lib1","SARS-CoV-2","TAACAAGGGATGGGCA",3,87.57,10.69,-0.08,0.06,2.93,1.04,0,">1 nonsynonymous","S43A G83M",2
"lib1","SARS-CoV-2","TAACAAGGTTACCGTA",7,22.07,6,-4.76,1.01,1.5,1.16,0.01,">1 nonsynonymous","F47V L183G",2
"lib1","SARS-CoV-2","TAACAAGTAAGAATAG",5,44.93,6,-4.76,1.01,1.5,1.23,0.02,">1 nonsynonymous","K56F L95P",2
"lib1","SARS-CoV-2","TAACAAGTACGGTATT",1,5.59,6.27,-4.5,2,3,1.12,0.01,">1 nonsynonymous","F99S C150I",2
"lib1","SARS-CoV-2","TAACAAGTGTCACTCG",1,8.55,7.22,-3.55,0.35,1.84,1.24,0.04,">1 nonsynonymous","I28M P82L S164M",3
"lib1","SARS-CoV-2","TAACAATAAGTACAAA",1,16.41,6,-4.76,1.04,1.5,1.1,0.01,">1 nonsynonymous","S19T G51Y L60M",3
"lib1","SARS-CoV-2","TAACAATAGCAGGGAA",2,86.87,10.79,0.02,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAATATGCTGCGA",3,30,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35I N92T R136Q T201R",4
"lib1","SARS-CoV-2","TAACAATATTCCGAAA",3,54.06,9.63,-1.13,0.04,2.89,1.01,0,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","TAACAATATTTTATTG",1,53.12,10.6,-0.16,0.08,2.59,1.05,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","TAACAATCATGTGAAA",3,15.63,8.63,-2.14,0.31,1.78,1.26,0.03,"1 nonsynonymous","F47E",1
"lib1","SARS-CoV-2","TAACAATCATTTTTAC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P K87S Y93A F99S R136S G174L",6
"lib1","SARS-CoV-2","TAACAATCTTAAACCG",4,69.21,10.63,-0.14,0.06,2.92,1.05,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","TAACAATGCAAGGAAA",2,23.09,6,-4.76,2,2.63,1.12,0,">1 nonsynonymous","S36M D90H I104K Y143D K199M",5
"lib1","SARS-CoV-2","TAACAATGCTTGTGCG",5,76.76,10.68,-0.09,0.1,2.79,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAATTAAAATTCA",7,41.88,6,-4.76,2,3,1.24,0,">1 nonsynonymous","R73E I80R N107A R136A C158S T170K",6
"lib1","SARS-CoV-2","TAACAATTAAGGAGGT",1,91.69,6.16,-4.6,0.81,1.5,1.2,0.02,">1 nonsynonymous","L5G S41F D59S D137W S184G",5
"lib1","SARS-CoV-2","TAACAATTGTATCTCG",7,93.87,10.67,-0.1,0.05,2.96,1.03,0,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","TAACACAAACTCCCTG",7,80.73,10.09,-0.68,0.07,2.51,1.04,0,">1 nonsynonymous","D98L N120F K199L",3
"lib1","SARS-CoV-2","TAACACAACAATAAGG",15,0.92,NA,NA,NA,NA,NA,NA,"stop","Y35* S41D Y123T",3
"lib1","SARS-CoV-2","TAACACAACCTACATT",1,18.35,10.72,-0.04,0.11,2.99,1,0.01,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","TAACACAAGCAGAGTA",6,4.44,NA,NA,NA,NA,NA,NA,"stop","I2S L60P D97L W106* T148N",5
"lib1","SARS-CoV-2","TAACACAAGCCTATAA",10,77.88,6,-4.76,1.22,1.5,1.21,0.01,">1 nonsynonymous","F62E G83H D112F G172T",4
"lib1","SARS-CoV-2","TAACACAATGACAAAT",2,30.92,9.5,-1.26,0.08,2.8,1.09,0,">1 nonsynonymous","R16L T55H T63L L125P",4
"lib1","SARS-CoV-2","TAACACACAGAGTGTA",2,32.29,10.58,-0.18,0.07,2.96,1.02,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","TAACACACAGCGATTT",1,56.19,6.59,-4.17,0.48,1.5,1.21,0.02,">1 nonsynonymous","F12C V37M W106I G196S",4
"lib1","SARS-CoV-2","TAACACACGTCATAAT",1,14.06,6.47,-4.29,0.83,3,1.13,0.01,">1 nonsynonymous","I2Y G9R L95P R136P",4
"lib1","SARS-CoV-2","TAACACAGGTAATTAA",3,83.62,6.15,-4.62,0.76,1.5,1.16,0.02,">1 nonsynonymous","K26E A42L N58Q F134Y Q176G",5
"lib1","SARS-CoV-2","TAACACAGTCCGCACT",1,22.82,10.84,0.08,0.11,2.83,1.13,0,"1 nonsynonymous","T55E",1
"lib1","SARS-CoV-2","TAACACATAAAACCGA",1,42.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86D N120K K128Y L162S R179M",5
"lib1","SARS-CoV-2","TAACACATACAGGTAC",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121S N151D",2
"lib1","SARS-CoV-2","TAACACATATTATTCA",1,11.66,10.09,-0.68,0.25,2.22,1.04,0.03,">1 nonsynonymous","T3L K26Y S139K E154K",4
"lib1","SARS-CoV-2","TAACACATCAAATATA",10,16.25,9,-1.76,0.23,1.8,1.23,0.04,">1 nonsynonymous","T3K T15E G51W F160N",4
"lib1","SARS-CoV-2","TAACACATCATTAGGT",9,0.05,NA,NA,NA,NA,NA,NA,"stop","F99* I104* V180P",3
"lib1","SARS-CoV-2","TAACACCAAAGTGGAA",1,25.25,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","C31Q F70H T100H S108F S147F Y165Q P197R",7
"lib1","SARS-CoV-2","TAACACCACGAGCAGT",3,7.24,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V37T C49D I80M Y93L F99V P133N",6
"lib1","SARS-CoV-2","TAACACCACTCGACTA",3,30.12,6.71,-4.05,0.35,1.66,1.17,0.02,">1 nonsynonymous","S19M N40M C49S V77M N107P T140P",6
"lib1","SARS-CoV-2","TAACACCAGCTGATCT",2,30.8,10.39,-0.37,0.16,2.31,1.19,0.01,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","TAACACCATCAAAGAT",3,51.59,10.24,-0.53,0.05,2.98,1,0,">1 nonsynonymous","D90N G174H",2
"lib1","SARS-CoV-2","TAACACCATGACATAC",1,7.81,6,-4.76,0.66,3,1.05,0,">1 nonsynonymous","F62R I80D T170S",3
"lib1","SARS-CoV-2","TAACACCATGTAAAAA",2,47.01,6.12,-4.64,1.1,1.5,1.26,0.04,">1 nonsynonymous","I88G N107V R136L P149C",4
"lib1","SARS-CoV-2","TAACACCCAAATGACG",6,164.16,10.05,-0.72,0.08,2.5,1.01,0,">1 nonsynonymous","S29W S36G G152T",3
"lib1","SARS-CoV-2","TAACACCCCTTTAGAA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","T3* S19P D112R P149W",4
"lib1","SARS-CoV-2","TAACACCGATCCTGAC",4,74.24,10.79,0.03,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACACCTACCAATTA",3,50.6,10.22,-0.54,0.04,2.89,1.01,0,">1 nonsynonymous","R136I N151H",2
"lib1","SARS-CoV-2","TAACACCTCATTGATA",2,81.56,8.61,-2.15,0.11,2.33,1.07,0,">1 nonsynonymous","T55N I142K P169H",3
"lib1","SARS-CoV-2","TAACACCTGCATTTGG",4,58.95,10.14,-0.63,0.08,2.58,1.03,0,">1 nonsynonymous","D34K K132N T148S",3
"lib1","SARS-CoV-2","TAACACCTTCTGAAAA",3,21.87,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","Y93G S164H",2
"lib1","SARS-CoV-2","TAACACCTTGGGGCTT",1,1.06,NA,NA,NA,NA,NA,NA,"stop","S29* S45A N64A Y91N Y175D P197V",6
"lib1","SARS-CoV-2","TAACACGAACACAGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","TAACACGATGGCTGAG",3,39.38,10.02,-0.74,0.07,2.81,1.06,0,"1 nonsynonymous","P133V",1
"lib1","SARS-CoV-2","TAACACGATGTACACA",1,38.56,9.52,-1.25,0.07,2.82,1.09,0,">1 nonsynonymous","N130G N157D",2
"lib1","SARS-CoV-2","TAACACGCACTACTTC",2,40.84,10.53,-0.24,0.07,2.96,1.04,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","TAACACGGATACCCAC",4,21.02,6.69,-4.07,0.39,1.5,1.12,0.02,">1 nonsynonymous","I2D Y91S F99L I104R",4
"lib1","SARS-CoV-2","TAACACGGGAATCTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S43W L122E G155C G172*",4
"lib1","SARS-CoV-2","TAACACGGTAGCACCG",5,61.78,9.97,-0.8,0.07,2.86,1.05,0,">1 nonsynonymous","K87S Y121L",2
"lib1","SARS-CoV-2","TAACACGGTCTGGCTA",21,300.38,10.79,0.02,0.06,2.91,1.07,0,">1 nonsynonymous","P197V T201D",2
"lib1","SARS-CoV-2","TAACACGTAATAATGA",1,14.45,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","R25M T85S F99C",3
"lib1","SARS-CoV-2","TAACACGTGAAATCGA",1,1.14,NA,NA,NA,NA,NA,NA,"stop","S36P S45P V103*",3
"lib1","SARS-CoV-2","TAACACTAAAAACTCG",8,145.62,10.74,-0.03,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACACTAAACATAAG",4,71.23,10.73,-0.03,0.06,2.82,1.12,0,">1 nonsynonymous","N4D S41E",2
"lib1","SARS-CoV-2","TAACACTAAAGAAATC",3,75.16,6.21,-4.55,0.74,1.5,1.19,0.02,">1 nonsynonymous","V52I C150R Q168S V173P",4
"lib1","SARS-CoV-2","TAACACTAGCTATAAG",8,62.26,10.24,-0.53,0.04,2.75,1.11,0,">1 nonsynonymous","N40T L125W K132S",3
"lib1","SARS-CoV-2","TAACACTATCAAAAAC",2,35.42,8.93,-1.83,0.13,1.9,1.1,0.01,">1 nonsynonymous","S43Q G83A K132W P169C",4
"lib1","SARS-CoV-2","TAACACTCAACAAATT",4,120.62,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y21A S29L D90M Y119L G174L",5
"lib1","SARS-CoV-2","TAACACTCAACGCCGT",3,48.57,7.96,-2.81,0.26,1.5,1.01,0.06,">1 nonsynonymous","I88S G101Q A105S Y178A",4
"lib1","SARS-CoV-2","TAACACTCCGGGCACA",2,21.81,6,-4.76,2,3,1.21,0,">1 nonsynonymous","F8L D90H P161D G166I T201M",5
"lib1","SARS-CoV-2","TAACACTGACTATAAG",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I Y123V N130G",3
"lib1","SARS-CoV-2","TAACACTTAAGATGAG",2,54.37,9.96,-0.81,0.1,2.86,1,0,">1 nonsynonymous","C6N V37N K199N",3
"lib1","SARS-CoV-2","TAACAGAAAACCTACA",6,36.86,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L95H C158T",2
"lib1","SARS-CoV-2","TAACAGAAAATGGTGC",5,10.74,6.34,-4.42,1.08,2.32,1.15,0.01,">1 nonsynonymous","D34I N107H C150T",3
"lib1","SARS-CoV-2","TAACAGAAAGTAGATT",3,11.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y66P D90V P96L L183H",4
"lib1","SARS-CoV-2","TAACAGAAATATCCAG",5,124.18,9.01,-1.76,0.05,2.73,1.14,0,">1 nonsynonymous","G9W N120P A190M",3
"lib1","SARS-CoV-2","TAACAGAAATTTCGCT",4,48.15,10.27,-0.49,0.05,2.84,1.03,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","TAACAGAACAAAATGA",6,52.88,7.63,-3.13,0.42,1.5,1,0.06,">1 nonsynonymous","N24S L95S",2
"lib1","SARS-CoV-2","TAACAGAACTTAAGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15S I28G Y93* G117F F160R P197*",6
"lib1","SARS-CoV-2","TAACAGAAGATACGAC",1,5.05,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","V20R S43F D97I",3
"lib1","SARS-CoV-2","TAACAGAATAGCAAAA",4,95.3,10.28,-0.49,0.05,2.9,1.06,0,">1 nonsynonymous","Q84C K87N",2
"lib1","SARS-CoV-2","TAACAGACACAATAAA",1,5.51,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGACACTCCTAT",3,15.61,10.76,0,0.1,2.7,1.11,0.01,">1 nonsynonymous","L5E V37R",2
"lib1","SARS-CoV-2","TAACAGACATATGACC",1,38.02,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","A14G Y121F G146A F167L G174L",5
"lib1","SARS-CoV-2","TAACAGACCGATCTCA",1,19.79,10.84,0.07,0.08,2.98,1.02,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TAACAGAGTACTGAAT",7,34.71,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L95H G166S",2
"lib1","SARS-CoV-2","TAACAGAGTCCAAACT",4,73.35,6,-4.76,1.18,1.5,1.19,0.01,">1 nonsynonymous","I2L E10H F167T A190E P197K",5
"lib1","SARS-CoV-2","TAACAGATTCATTTAT",7,56.59,6.39,-4.37,0.32,1.5,1.06,0.01,"1 nonsynonymous","F99K",1
"lib1","SARS-CoV-2","TAACAGATTGAGTGCT",1,39.09,6,-4.76,1.37,1.5,1.29,0.02,">1 nonsynonymous","T85K D97S K128F R136N",4
"lib1","SARS-CoV-2","TAACAGCAACATTGCT",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y F99I S129F D137L",4
"lib1","SARS-CoV-2","TAACAGCAATTACAAA",2,61.39,9.66,-1.11,0.2,1.59,1.19,0.01,">1 nonsynonymous","F12R E141N",2
"lib1","SARS-CoV-2","TAACAGCACATTCCCG",1,85.06,10.67,-0.09,0.04,2.88,1.03,0,">1 nonsynonymous","G9L N151S P197R",3
"lib1","SARS-CoV-2","TAACAGCACTCTATCA",3,24.17,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","A18E A42V N107F T201A",4
"lib1","SARS-CoV-2","TAACAGCATACTAGAT",3,74.04,10.53,-0.24,0.04,2.9,1.03,0,"1 nonsynonymous","A89C",1
"lib1","SARS-CoV-2","TAACAGCCCACCCCAT",1,6.54,6.15,-4.62,1.5,1.5,1.21,0.04,">1 nonsynonymous","T3D A14D D90V",3
"lib1","SARS-CoV-2","TAACAGCCCCTAAACA",7,116.61,10.78,0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGCCGAACATAG",1,13.17,10.57,-0.2,0.06,3,1.01,0,"1 nonsynonymous","K199R",1
"lib1","SARS-CoV-2","TAACAGCCGAGTTGCG",2,58.76,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F17K F44V Y165E R179S",4
"lib1","SARS-CoV-2","TAACAGCCGTGGTCTG",4,22.45,10.75,-0.02,0.1,2.94,1.02,0,"1 nonsynonymous","K48A",1
"lib1","SARS-CoV-2","TAACAGCGAATAAGCT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","F12Y K94V N107* G174*",4
"lib1","SARS-CoV-2","TAACAGCGTAATCACC",2,54.45,10.63,-0.13,0.06,2.89,1.03,0,">1 nonsynonymous","T55D N64P K128A",3
"lib1","SARS-CoV-2","TAACAGCTCCCGGGGG",3,37.78,10.85,0.08,0.08,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGCTCCTCGGAT",1,22.86,10.67,-0.1,0.05,2.88,1.03,0,"1 nonsynonymous","T100A",1
"lib1","SARS-CoV-2","TAACAGCTTGCGACCA",3,2.15,NA,NA,NA,NA,NA,NA,"stop","C61W Y178*",2
"lib1","SARS-CoV-2","TAACAGGAATTAGAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","C31Y W106S L122*",3
"lib1","SARS-CoV-2","TAACAGGAATTTTTCT",6,52.86,9,-1.77,0.18,1.63,1.16,0.01,">1 nonsynonymous","I2L F8R",2
"lib1","SARS-CoV-2","TAACAGGATTGATTGG",5,71.49,10.77,0,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGGCCTCAATAG",4,30.64,9.91,-0.86,0.11,2.52,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGGGAATAGTCG",2,13.41,8.57,-2.2,0.3,1.66,1.08,0.05,">1 nonsynonymous","N4F E135W T148E G166S",4
"lib1","SARS-CoV-2","TAACAGGGACAATTAT",3,33.99,10.66,-0.1,0.13,2.94,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAACAGGGAGCAGAAT",5,77.02,8.88,-1.88,0.14,2.38,1.12,0.01,">1 nonsynonymous","S41C R73L",2
"lib1","SARS-CoV-2","TAACAGGGTCAGCACT",3,39.23,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","I2M W23A D68A P133I P149A",5
"lib1","SARS-CoV-2","TAACAGTAAATAATAT",4,45.7,10.56,-0.21,0.04,2.88,1.05,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","TAACAGTAATTTCATT",2,13.63,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G86W S129L I142C C150E",4
"lib1","SARS-CoV-2","TAACAGTAGACCAGAT",4,47.5,10.62,-0.14,0.05,2.9,1.04,0,"1 nonsynonymous","Q144G",1
"lib1","SARS-CoV-2","TAACAGTATAAATAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V77E P82S A145*",3
"lib1","SARS-CoV-2","TAACAGTCTGCACAAC",4,33.56,8.68,-2.08,0.09,2.98,1.05,0,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","TAACAGTGATTGGTTC",3,83.69,10.54,-0.22,0.03,2.9,1.05,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","TAACAGTGCAAACGAA",9,2.06,NA,NA,NA,NA,NA,NA,"stop","P54* C61S F99A K114T",4
"lib1","SARS-CoV-2","TAACAGTGCTACCGCG",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I F134S",2
"lib1","SARS-CoV-2","TAACAGTGTGAACCGA",1,11,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y35R S41L G86T Y119H N130I G172Y",6
"lib1","SARS-CoV-2","TAACAGTTAAAAGCCA",3,72.13,8.25,-2.52,0.16,2.78,1.09,0.01,">1 nonsynonymous","I28L L125D H189Y",3
"lib1","SARS-CoV-2","TAACAGTTAGACCCCC",2,39.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33K G83M E141D R179G",4
"lib1","SARS-CoV-2","TAACAGTTATCTAAGT",2,51.94,10.62,-0.15,0.1,2.9,1.04,0,"1 nonsynonymous","K26S",1
"lib1","SARS-CoV-2","TAACAGTTCATCAGAT",4,152.45,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P149L G172D Y178A",3
"lib1","SARS-CoV-2","TAACATAAAAAAACTA",3,45.3,9.75,-1.01,0.04,2.92,1.06,0,"1 nonsynonymous","R73A",1
"lib1","SARS-CoV-2","TAACATAAAAAGTGCT",1,33.82,10.68,-0.08,0.04,2.84,1.12,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","TAACATAAACAATTGA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","G86* Y123P K128N P149V E154S T201W",6
"lib1","SARS-CoV-2","TAACATAAACTCAGGC",1,14.25,8.77,-2,0.17,1.73,1.16,0.01,">1 nonsynonymous","L5R Y91E",2
"lib1","SARS-CoV-2","TAACATAAAGATAATG",2,42.67,10.61,-0.15,0.06,2.88,1,0,">1 nonsynonymous","C61T I80V",2
"lib1","SARS-CoV-2","TAACATAACGGGTAAA",4,166.4,10.18,-0.58,0.06,2.72,1,0,">1 nonsynonymous","N40I A192T",2
"lib1","SARS-CoV-2","TAACATAAGATAAAAC",5,75.06,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","R73P S113Q S200M",3
"lib1","SARS-CoV-2","TAACATAAGCCGGTAT",2,24.67,9.29,-1.48,0.17,1.81,1.17,0.02,">1 nonsynonymous","A14F A22E L60S",3
"lib1","SARS-CoV-2","TAACATACCTTATCAC",6,86.76,10.3,-0.47,0.05,2.88,1.03,0,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","TAACATACTTACATTT",9,98.98,10.06,-0.7,0.05,2.83,1.04,0,">1 nonsynonymous","P7L K87S",2
"lib1","SARS-CoV-2","TAACATAGAAATATTC",3,6.84,NA,NA,NA,NA,NA,NA,"stop","D97* C102W G172C",3
"lib1","SARS-CoV-2","TAACATAGCAGCTTCA",3,1.76,NA,NA,NA,NA,NA,NA,"stop","V37C N58Y V71* N130*",4
"lib1","SARS-CoV-2","TAACATAGCGATTAAA",4,1.69,NA,NA,NA,NA,NA,NA,"stop","V11* F17S G51F D90H S113F",5
"lib1","SARS-CoV-2","TAACATAGTACATAAT",1,44.99,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F17V G83N D90S T100P L125S",5
"lib1","SARS-CoV-2","TAACATAGTTGTCCTA",1,5.28,6.06,-4.71,1.93,3,1.06,0,">1 nonsynonymous","C6D I28L L60W F156P Y175N L187I",6
"lib1","SARS-CoV-2","TAACATATCCGACTAT",1,5447.71,10.73,-0.03,0.04,2.93,1.04,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","TAACATATGCAACCCG",2,54.98,9.84,-0.92,0.15,1.85,1.06,0.01,">1 nonsynonymous","K26N R136T",2
"lib1","SARS-CoV-2","TAACATATGTAAACGC",2,22.63,10.05,-0.71,0.27,2.51,1.13,0.03,">1 nonsynonymous","D97I K132P",2
"lib1","SARS-CoV-2","TAACATCCAAATGGGG",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V D97I L122S",3
"lib1","SARS-CoV-2","TAACATCCAACGAGAC",5,57.52,10.59,-0.17,0.1,2.83,1.09,0,"1 nonsynonymous","T46E",1
"lib1","SARS-CoV-2","TAACATCCGGCATGAA",5,65.65,10.74,-0.02,0.05,2.93,1.04,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","TAACATCTTTAGATAT",4,21.58,9.69,-1.07,0.12,1.81,1.09,0.01,">1 nonsynonymous","D90E P96D P149G P197T",4
"lib1","SARS-CoV-2","TAACATCTTTAGTGAT",3,16.26,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","T3Y S41E C49D S200Q",4
"lib1","SARS-CoV-2","TAACATGAACCACCTT",2,15.71,6,-4.76,2,3,1,0,">1 nonsynonymous","F70S V77H P96C T148L",4
"lib1","SARS-CoV-2","TAACATGAACTCACAA",3,39.78,6.46,-4.31,0.27,1.5,1.07,0.01,">1 nonsynonymous","P96T T140V T148Y G166M",4
"lib1","SARS-CoV-2","TAACATGCAAAAGTCG",5,48.03,10.1,-0.67,0.08,2.74,1.02,0,">1 nonsynonymous","C6I N151K",2
"lib1","SARS-CoV-2","TAACATGCAAAGAGAA",3,41.36,6.47,-4.29,0.34,1.52,1.11,0.01,">1 nonsynonymous","L5G G74M Y91A",3
"lib1","SARS-CoV-2","TAACATGCAACTTAAC",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W L60K K114R",3
"lib1","SARS-CoV-2","TAACATGCATGTATCA",1,11.42,9.97,-0.8,0.11,2.61,1.03,0.01,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","TAACATGCATTAACTT",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F C61T T85I D98R",4
"lib1","SARS-CoV-2","TAACATGCGTAGATTT",3,21.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50H Y91Q N107V F167R",4
"lib1","SARS-CoV-2","TAACATGCTACACTCC",2,24.38,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","R25S G51C Y178S",3
"lib1","SARS-CoV-2","TAACATGTAAACAATA",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39M N151H R179M",3
"lib1","SARS-CoV-2","TAACATGTATATTGTT",1,59.27,10.37,-0.4,0.05,2.94,1,0,">1 nonsynonymous","N64Y T170S A192I",3
"lib1","SARS-CoV-2","TAACATGTGAGTCTGC",5,11.28,10.66,-0.11,0.11,2.82,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAACATGTTTGCGCAT",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M F134L P149Q",3
"lib1","SARS-CoV-2","TAACATTAAATAGGGT",1,22.1,8.39,-2.37,0.39,1.5,1,0.07,">1 nonsynonymous","C31A Y39T N92E",3
"lib1","SARS-CoV-2","TAACATTAAGCCTAGT",8,129.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N92V Y119Q N151T N157H",4
"lib1","SARS-CoV-2","TAACATTAATAAATAA",9,96.69,10.21,-0.55,0.04,2.88,1.02,0,">1 nonsynonymous","Y39W V52C N58D E141S",4
"lib1","SARS-CoV-2","TAACATTAATAATCCA",3,45.89,9.5,-1.27,0.09,2.7,1.16,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","TAACATTAATATTACA",5,82.76,9.4,-1.36,0.15,1.94,1.09,0.01,">1 nonsynonymous","P7I K56A G155C",3
"lib1","SARS-CoV-2","TAACATTAGGAAATAG",8,114.07,9.14,-1.62,0.18,1.5,1.17,0.01,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","TAACATTAGGCAAGAT",3,63.2,10.3,-0.47,0.07,2.77,1.03,0,">1 nonsynonymous","F99M L122T",2
"lib1","SARS-CoV-2","TAACATTATCGTAGGT",4,187.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44K P177F",2
"lib1","SARS-CoV-2","TAACATTCAGAGATAG",6,46.62,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89D D97G N110S F156R",4
"lib1","SARS-CoV-2","TAACATTCCAAATGTC",1,6.03,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D97L R127V",2
"lib1","SARS-CoV-2","TAACATTCCGGGTACC",4,52.64,10.03,-0.74,0.06,2.9,1,0,">1 nonsynonymous","R16M A145C",2
"lib1","SARS-CoV-2","TAACATTCGCACCTTA",7,21.64,6.73,-4.03,0.3,1.5,1.19,0.01,">1 nonsynonymous","D34F Q84L T148I P169Q",4
"lib1","SARS-CoV-2","TAACATTCTCTTGATA",10,65.54,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N1I F8A R25D F62N K87S D97T G146W Q163K",8
"lib1","SARS-CoV-2","TAACATTGCTGAGCAA",4,1.05,NA,NA,NA,NA,NA,NA,"stop","Y39G N107V N118H V153*",4
"lib1","SARS-CoV-2","TAACATTGTTGAGTTG",4,55.61,8.19,-2.58,0.24,1.5,1.19,0.02,">1 nonsynonymous","C6F Y121K T201Q",3
"lib1","SARS-CoV-2","TAACATTTAGGTTACA",2,13.67,6,-4.76,2,3,1.13,0,">1 nonsynonymous","Y50T Y121W",2
"lib1","SARS-CoV-2","TAACATTTCTGCAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7K N13I Y91L S108* R136Y L183K",6
"lib1","SARS-CoV-2","TAACCAAAAAATACGT",1,88.61,10.67,-0.09,0.05,2.93,1.05,0,"1 nonsynonymous","V115S",1
"lib1","SARS-CoV-2","TAACCAAAACTCCGCA",11,60.72,6,-4.76,1.22,1.5,1.17,0.01,">1 nonsynonymous","A33S V37I A81I N92F L122F",5
"lib1","SARS-CoV-2","TAACCAAAATATTAAC",5,10.79,10.5,-0.27,0.11,2.89,1.11,0,"1 nonsynonymous","S200G",1
"lib1","SARS-CoV-2","TAACCAAACGTAGCAA",1,9.48,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","T15L A22G S53W P96T P133T C150D",6
"lib1","SARS-CoV-2","TAACCAAAGTGATTCG",3,20,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D59T K132N P177H",3
"lib1","SARS-CoV-2","TAACCAAATACCAAAA",2,12.73,9.84,-0.93,0.22,1.89,1.15,0.02,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","TAACCAAATCAAGTGA",1,51.26,9.96,-0.8,0.05,2.66,1.02,0,">1 nonsynonymous","C6Y N13E C31L N64D",4
"lib1","SARS-CoV-2","TAACCAAATGAGTTGC",6,45.14,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","TAACCAAATTCATAGG",4,37.99,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G83S L162E",2
"lib1","SARS-CoV-2","TAACCAACAACCTTAG",1,30.72,9.2,-1.57,0.08,2.79,1.15,0,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","TAACCAACACTGTGAA",3,26.49,8.29,-2.47,0.22,2.06,1.13,0.02,">1 nonsynonymous","V52L G146I",2
"lib1","SARS-CoV-2","TAACCAACATACCAAC",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S L183D",2
"lib1","SARS-CoV-2","TAACCAACCCCTCCAG",4,37.52,10.7,-0.07,0.03,2.9,1.05,0,">1 nonsynonymous","Q163R K198Y",2
"lib1","SARS-CoV-2","TAACCAACTTAGGTCC",6,91.79,10.71,-0.05,0.09,2.87,1.04,0,"1 nonsynonymous","E141Q",1
"lib1","SARS-CoV-2","TAACCAAGAAAAGTGA",2,73.65,10.27,-0.5,0.05,2.89,1,0,">1 nonsynonymous","G83F D90Y",2
"lib1","SARS-CoV-2","TAACCAAGATTAAACA",9,88.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37G G86M L122P A192D",4
"lib1","SARS-CoV-2","TAACCAAGATTATGAT",8,94.25,9.22,-1.54,0.1,2.26,1.11,0,">1 nonsynonymous","L60M K87M K94G Q168S",4
"lib1","SARS-CoV-2","TAACCAAGTATTCAAA",5,98.5,10.73,-0.04,0.06,2.91,1.06,0,">1 nonsynonymous","K56E K198L",2
"lib1","SARS-CoV-2","TAACCAATAACAACTT",2,0.43,NA,NA,NA,NA,NA,NA,"stop","S53* G86* A105K Y121W S129Y I142Y N151M",7
"lib1","SARS-CoV-2","TAACCAATATATTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S C31* K94R N171R",4
"lib1","SARS-CoV-2","TAACCACACGCGTCCC",3,1.09,NA,NA,NA,NA,NA,NA,"stop","C31* C49G G86K K114N T201I",5
"lib1","SARS-CoV-2","TAACCACACGGTCCAC",1,23.4,9.12,-1.65,0.09,2.7,1.2,0,">1 nonsynonymous","A33F P96S G117Y",3
"lib1","SARS-CoV-2","TAACCACAGAGAAGCC",4,0.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","TAACCACAGCACTTAC",1,37.89,9.37,-1.39,0.08,2.81,1.08,0,"1 nonsynonymous","N157S",1
"lib1","SARS-CoV-2","TAACCACCATATTAGC",1,48.06,8.75,-2.02,0.25,1.5,1.09,0.03,">1 nonsynonymous","A42K D68M T85I",3
"lib1","SARS-CoV-2","TAACCACCCACTCCAT",3,186.74,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","L95M W106G Q163T",3
"lib1","SARS-CoV-2","TAACCACCCCCTTCCA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib1","SARS-CoV-2","TAACCACCCCTACCCG",5,0,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib1","SARS-CoV-2","TAACCACCCTGACGGG",1,76.19,10.82,0.05,0.07,2.88,1.07,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","TAACCACGTGCTTCTT",2,0.56,NA,NA,NA,NA,NA,NA,"stop","R16T S129* S147Y Y178H",4
"lib1","SARS-CoV-2","TAACCACTACTGAGTG",1,13.74,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","D68S A105K Y143V V153G",4
"lib1","SARS-CoV-2","TAACCACTGTAAGCCT",2,16.43,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","P82Y R136T",2
"lib1","SARS-CoV-2","TAACCACTTCCTTCAG",6,1.01,NA,NA,NA,NA,NA,NA,"stop","N1* T201G",2
"lib1","SARS-CoV-2","TAACCAGACCTATACA",1,5.13,6,-4.76,2,1.5,1.11,0.07,">1 nonsynonymous","K87I V103Y H189Y P197F",4
"lib1","SARS-CoV-2","TAACCAGATGCAATAC",1,41.61,10.57,-0.2,0.09,2.83,1.12,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","TAACCAGCAAAAAAGC",5,1.9,NA,NA,NA,NA,NA,NA,"stop","D34* Y143L",2
"lib1","SARS-CoV-2","TAACCAGCGACAACAG",8,110.17,8.78,-1.98,0.08,2.83,1.07,0,">1 nonsynonymous","Y66T Y159M",2
"lib1","SARS-CoV-2","TAACCAGCTTCAAATA",7,37.34,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6M V71P K87I L122E V173C",5
"lib1","SARS-CoV-2","TAACCAGGATGCAAAT",1,10.4,10.61,-0.15,0.2,2.65,1.27,0.01,"1 nonsynonymous","V37F",1
"lib1","SARS-CoV-2","TAACCAGGTATATCCT",7,84.04,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","E135T Y143D",2
"lib1","SARS-CoV-2","TAACCAGGTTTTAATG",3,58.46,9.32,-1.45,0.09,1.71,1.15,0,">1 nonsynonymous","F12K G51N K199S",3
"lib1","SARS-CoV-2","TAACCAGTAACATTAA",1,17.47,8.45,-2.32,0.28,2.07,1.13,0.03,">1 nonsynonymous","D112L K128G F156A",3
"lib1","SARS-CoV-2","TAACCAGTCATCTACC",3,40.41,6.99,-3.77,0.47,1.5,1.18,0.04,">1 nonsynonymous","F47Y T55L Q176R",3
"lib1","SARS-CoV-2","TAACCAGTCATGGACA",2,5.23,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","TAACCAGTGGTTTTAA",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123S G152S R179N",3
"lib1","SARS-CoV-2","TAACCATAAACCTGCC",1,15.28,6.63,-4.13,0.3,3,1.04,0,">1 nonsynonymous","V20T I28E I142M L188P",4
"lib1","SARS-CoV-2","TAACCATATAATAAAT",6,106.75,10.56,-0.21,0.05,2.86,1.08,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","TAACCATATACACTAG",7,118.81,8.37,-2.4,0.14,1.59,1.16,0.01,">1 nonsynonymous","L125P V182S",2
"lib1","SARS-CoV-2","TAACCATATGAAAATA",5,76.36,10.73,-0.04,0.06,2.93,1.05,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","TAACCATCCACTTTAA",2,1.72,NA,NA,NA,NA,NA,NA,"stop","I2D V20* S43D G166V",4
"lib1","SARS-CoV-2","TAACCATGAAATTAGT",1,49.98,10.73,-0.04,0.04,2.94,1.04,0,">1 nonsynonymous","R16W C61E",2
"lib1","SARS-CoV-2","TAACCATGCGCTAGGT",4,107.62,8.55,-2.21,0.1,2.43,1.09,0,">1 nonsynonymous","Y91H N120T",2
"lib1","SARS-CoV-2","TAACCATGGATAGTTT",2,41.56,10.87,0.11,0.08,2.89,1.06,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","TAACCATTCGCCAAGG",2,19.59,10.73,-0.04,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACCATTCTGACTAA",3,308.49,7.6,-3.17,0.26,1.5,1.05,0.02,">1 nonsynonymous","L5D N30L D90L S129P",4
"lib1","SARS-CoV-2","TAACCATTGGAATAAT",1,13.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90V G116M P149L",3
"lib1","SARS-CoV-2","TAACCATTGTTACCCT",6,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H C102R K114Q",3
"lib1","SARS-CoV-2","TAACCATTTCATTTGA",2,50.42,6,-4.76,2,3,1.22,0,">1 nonsynonymous","D90N G117L Q144L Y165T",4
"lib1","SARS-CoV-2","TAACCATTTTTAAAAC",3,2.03,NA,NA,NA,NA,NA,NA,"stop","G9T F17M V37L L60* G146C L187R T201L",7
"lib1","SARS-CoV-2","TAACCCAAAACAAAAA",2,15.73,10.7,-0.06,0.08,2.92,1.07,0,"1 nonsynonymous","T140A",1
"lib1","SARS-CoV-2","TAACCCAAAATCTAAG",5,17.7,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F47Y F99M W106V Q144W C150D",5
"lib1","SARS-CoV-2","TAACCCAAACGATATT",4,20.97,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","Y93H D98R V103L D137C K199M",5
"lib1","SARS-CoV-2","TAACCCAAACTTTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M E135M",2
"lib1","SARS-CoV-2","TAACCCAAATTATTTG",9,169.57,10.49,-0.28,0.04,2.93,1,0,">1 nonsynonymous","F47I P149M",2
"lib1","SARS-CoV-2","TAACCCAACGCGAGAA",8,43.81,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6S D90P L122M",3
"lib1","SARS-CoV-2","TAACCCAATGGACCGT",5,6.81,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42L G86M W106L Y143G",4
"lib1","SARS-CoV-2","TAACCCACCTAAACCA",5,63.34,8.73,-2.03,0.13,2.11,1.19,0.01,">1 nonsynonymous","F44D D59A A81R K87N",4
"lib1","SARS-CoV-2","TAACCCACCTGTAGTT",5,132.04,9.1,-1.66,0.07,2.77,1.15,0,">1 nonsynonymous","F62Y Y119G E141Y",3
"lib1","SARS-CoV-2","TAACCCACGTAGGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R D68E W106F N120S N130M",5
"lib1","SARS-CoV-2","TAACCCACTCTCCTGT",3,44.98,8.4,-2.37,0.2,1.86,1.1,0.02,">1 nonsynonymous","Y35C D97Y G146T T201M",4
"lib1","SARS-CoV-2","TAACCCACTGGAAAAA",5,78.96,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N130C Y143K N157Q Q176L",4
"lib1","SARS-CoV-2","TAACCCAGAAGATTGG",5,0.33,NA,NA,NA,NA,NA,NA,"stop","T3I Y35V G155V S200*",4
"lib1","SARS-CoV-2","TAACCCAGAATCCTTA",2,11.74,7.17,-3.59,0.45,1.5,1.09,0.05,">1 nonsynonymous","F17L N107M",2
"lib1","SARS-CoV-2","TAACCCAGGATGAATA",11,173.63,10.78,0.01,0.08,2.79,1.03,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","TAACCCATAATAAGTC",6,114.58,9.91,-0.85,0.08,2.17,1.05,0,">1 nonsynonymous","W106T V115M",2
"lib1","SARS-CoV-2","TAACCCATAGGTCTTG",6,1.94,NA,NA,NA,NA,NA,NA,"stop","A81S Y91* L183A",3
"lib1","SARS-CoV-2","TAACCCATGACCTTAT",7,54.48,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F99S P133L",2
"lib1","SARS-CoV-2","TAACCCCATGGTTAAG",3,10.69,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","K26H Y93S I104G Y178P",4
"lib1","SARS-CoV-2","TAACCCCCCGCAGCAT",2,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87M W106Q",2
"lib1","SARS-CoV-2","TAACCCCCCTTAATGA",3,10.06,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","T3E I72Q S108M Y123G",4
"lib1","SARS-CoV-2","TAACCCCGAACAACAA",6,27.39,6.9,-3.86,0.51,1.5,1.1,0.05,">1 nonsynonymous","V77E D98V A192Y",3
"lib1","SARS-CoV-2","TAACCCGGGTGGGATC",5,93.65,9.72,-1.05,0.1,2.08,1.08,0,">1 nonsynonymous","D112L Y121F",2
"lib1","SARS-CoV-2","TAACCCGTAAATATTT",1,1.63,NA,NA,NA,NA,NA,NA,"stop","Y35V Y91F T201*",3
"lib1","SARS-CoV-2","TAACCCGTTCCCCAAG",3,14.42,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","K87M Y119L A145C P161T",4
"lib1","SARS-CoV-2","TAACCCTAACGTGCAT",5,128.81,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S113D Y119V Y175L",3
"lib1","SARS-CoV-2","TAACCCTAAGAACAGC",3,13.22,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P82Q G152F",2
"lib1","SARS-CoV-2","TAACCCTAGAAATCAC",14,87.34,6.11,-4.65,1,1.5,1.31,0.03,">1 nonsynonymous","F12Y V37L T100D",3
"lib1","SARS-CoV-2","TAACCCTAGTCATAAC",4,61.24,6.59,-4.17,0.74,1.5,1.19,0.06,">1 nonsynonymous","L5M D90Y N107E S113D F134Y I142R N157W",7
"lib1","SARS-CoV-2","TAACCCTATAACACCG",5,10.52,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","S113L V181P",2
"lib1","SARS-CoV-2","TAACCCTCATATAACC",3,32.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y143H N157Y F167G",3
"lib1","SARS-CoV-2","TAACCCTCCTGACACC",4,1.3,NA,NA,NA,NA,NA,NA,"stop","P54Y P96Y T100S N107* N157S",5
"lib1","SARS-CoV-2","TAACCCTCGATGGACA",8,80.85,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N1G C61R D68W K128N",4
"lib1","SARS-CoV-2","TAACCCTCTCCGTTTT",6,3.88,NA,NA,NA,NA,NA,NA,"stop","F44R G117S Y123* A192T",4
"lib1","SARS-CoV-2","TAACCCTCTGGAGTGC",5,36.73,9.86,-0.91,0.08,2.13,1.12,0,">1 nonsynonymous","P7S Y35I E76F",3
"lib1","SARS-CoV-2","TAACCCTTAAGTCTCA",4,47.27,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F12Q A105E",2
"lib1","SARS-CoV-2","TAACCCTTCGCCGAAG",3,0.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAACCCTTTATCATAG",13,89.49,7.58,-3.19,0.23,1.5,1.12,0.01,">1 nonsynonymous","Y35P L131N T201L",3
"lib1","SARS-CoV-2","TAACCGAAATTAATAC",1,18.92,7.39,-3.37,0.42,1.5,1.17,0.04,">1 nonsynonymous","L60Q Y91L S139R G152I",4
"lib1","SARS-CoV-2","TAACCGAAGCTAGTTG",1,27.14,9.23,-1.53,0.14,2.66,1.16,0.01,">1 nonsynonymous","T85E K114P",2
"lib1","SARS-CoV-2","TAACCGACGAGACTCT",4,58.07,6,-4.76,1.25,1.5,1.15,0.01,">1 nonsynonymous","I72K S129H L162R Y178N",4
"lib1","SARS-CoV-2","TAACCGATATGCAATC",5,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y Y35C P149T F167K",4
"lib1","SARS-CoV-2","TAACCGATGCCCATGA",1,16.48,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F8V Y91L V103N",3
"lib1","SARS-CoV-2","TAACCGCAACGTACCA",2,10.82,9.29,-1.47,0.19,2.26,1.03,0.02,">1 nonsynonymous","L57G G116T F156L",3
"lib1","SARS-CoV-2","TAACCGCAAGGAGGCA",1,66.28,6.2,-4.56,0.74,1.5,1.16,0.02,">1 nonsynonymous","S113V S139H P177T",3
"lib1","SARS-CoV-2","TAACCGCAGCCCTAAA",5,30.59,10.31,-0.45,0.03,2.95,1,0,">1 nonsynonymous","N40S Y91N",2
"lib1","SARS-CoV-2","TAACCGCATAAGCCAC",4,35.22,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","K94S Q163P",2
"lib1","SARS-CoV-2","TAACCGCTAGAAGGAT",4,1.27,NA,NA,NA,NA,NA,NA,"stop","C6V P133*",2
"lib1","SARS-CoV-2","TAACCGCTGAAGCGAT",2,8.11,10.88,0.12,0.19,2.91,1,0.03,"wildtype","",0
"lib1","SARS-CoV-2","TAACCGGAAATAGTAA",1,5.69,6,-4.76,2,3,1.06,0,">1 nonsynonymous","Y35N P54Y D90F E141S E154G",5
"lib1","SARS-CoV-2","TAACCGGCGAGGCCGC",2,13.15,8.8,-1.97,0.21,1.5,1.09,0.02,">1 nonsynonymous","F8G N58L G152N",3
"lib1","SARS-CoV-2","TAACCGGGAATAGTTT",3,9.1,6.89,-3.87,0.66,1.5,1.16,0.06,">1 nonsynonymous","C61K D97I S139C C150N P177L L183T",6
"lib1","SARS-CoV-2","TAACCGTCGTTTACTA",6,92.08,9.14,-1.63,0.19,1.5,1.2,0.01,">1 nonsynonymous","V37K A81H I138W",3
"lib1","SARS-CoV-2","TAACCGTTAAAAGTAT",3,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K I28K K87I W106L C150P F160C",6
"lib1","SARS-CoV-2","TAACCGTTCACTATAC",1,17.98,6,-4.76,2,3,1.11,0.03,">1 nonsynonymous","Y93H W106P Q144R G166C",4
"lib1","SARS-CoV-2","TAACCGTTGAAAACAC",3,10.33,10.34,-0.43,0.09,2.85,1.03,0,">1 nonsynonymous","D97A P133G V153N",3
"lib1","SARS-CoV-2","TAACCTAAACCGAGAT",3,3.63,NA,NA,NA,NA,NA,NA,"stop","A22* V65S",2
"lib1","SARS-CoV-2","TAACCTAACCAAACTA",1,6.16,10.14,-0.63,0.15,2.81,1,0.01,">1 nonsynonymous","A33V K114Y E141W",3
"lib1","SARS-CoV-2","TAACCTAACCTCCCAA",1,11.53,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F70C S113N L122R P149L P169W V180A S184T",7
"lib1","SARS-CoV-2","TAACCTAACGAAAACG",3,28.32,8.04,-2.72,0.2,1.63,1.1,0.01,">1 nonsynonymous","A42N N107L G116T",3
"lib1","SARS-CoV-2","TAACCTAAGGAGCGTA",3,17.06,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F12H S36F C49K K87E P133S",5
"lib1","SARS-CoV-2","TAACCTACCTAATCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61V D68K G74W A89D L111D Y159*",6
"lib1","SARS-CoV-2","TAACCTACTAATGAAT",1,6.67,8.36,-2.41,0.41,1.62,1.17,0.04,">1 nonsynonymous","L5P R25V A42T",3
"lib1","SARS-CoV-2","TAACCTACTGAAAAAA",2,5.51,NA,NA,NA,NA,NA,NA,"stop","I2S F12V T55I R78S G101P F160* Q176H",7
"lib1","SARS-CoV-2","TAACCTAGCGTGCGAT",4,1.65,NA,NA,NA,NA,NA,NA,"stop","Y91* K128G G146E",3
"lib1","SARS-CoV-2","TAACCTAGTGCGTTTG",6,136.2,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2V S36L V65S C158F",4
"lib1","SARS-CoV-2","TAACCTATAACGAAAA",2,19.96,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","R27G L38A D112E N118K P149E",5
"lib1","SARS-CoV-2","TAACCTATCATCTAAT",3,85.91,10.79,0.02,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACCTATCCTCCTCC",2,150.74,10.13,-0.64,0.03,2.95,1.02,0,"1 nonsynonymous","G174E",1
"lib1","SARS-CoV-2","TAACCTATCGCATCAG",14,124.56,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","E10Q G83R L131F K132L G172V",5
"lib1","SARS-CoV-2","TAACCTATCTAATGAG",2,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y G51I G86F",3
"lib1","SARS-CoV-2","TAACCTATGACGTACA",4,22.26,6.14,-4.62,0.93,1.5,1.2,0.02,">1 nonsynonymous","E10Y S41P D59M V103A N118V",5
"lib1","SARS-CoV-2","TAACCTCAGTTCCAGT",4,0.49,NA,NA,NA,NA,NA,NA,"stop","A42K K48S D68* L111F",4
"lib1","SARS-CoV-2","TAACCTCAGTTCCATC",2,57.59,10.15,-0.61,0.06,2.76,1.03,0,">1 nonsynonymous","Y35C D97T K199T",3
"lib1","SARS-CoV-2","TAACCTCCTATTTGTC",3,80.77,10.31,-0.45,0.03,2.85,1.03,0,">1 nonsynonymous","A42S K56S F134E",3
"lib1","SARS-CoV-2","TAACCTCTAGTGCGCA",4,29.96,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R25K Y91I I104V I142S",4
"lib1","SARS-CoV-2","TAACCTCTCTGTACTC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","R27Q N58L Y66S N107* I142F",5
"lib1","SARS-CoV-2","TAACCTCTGACTACTT",6,1.49,NA,NA,NA,NA,NA,NA,"stop","K56* Y123S E141H",3
"lib1","SARS-CoV-2","TAACCTCTTCTAGACT",1,1.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","TAACCTGAAACACTTT",4,23.23,6.16,-4.6,0.86,1.5,1.13,0.03,">1 nonsynonymous","R25F Y50S D90F F99Q S129K A145T",6
"lib1","SARS-CoV-2","TAACCTGAAGCAAGCG",1,31.05,10.63,-0.14,0.05,2.95,1.06,0,">1 nonsynonymous","K114I L122N",2
"lib1","SARS-CoV-2","TAACCTGAATACTACA",2,39.77,10.67,-0.1,0.07,2.88,1.08,0,"1 nonsynonymous","K87R",1
"lib1","SARS-CoV-2","TAACCTGACCGCTATC",1,85.99,10.68,-0.08,0.07,2.89,1.09,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","TAACCTGAGCATGATT",1,48.85,9.87,-0.9,0.09,2.15,1.06,0,">1 nonsynonymous","T63I V180T",2
"lib1","SARS-CoV-2","TAACCTGCGAGATAAT",4,17.18,6,-4.76,2,1.5,1.33,0.08,">1 nonsynonymous","R127P Y175E",2
"lib1","SARS-CoV-2","TAACCTGCGTCCACAC",3,22.67,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","TAACCTGGATGCAAAT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52S D90V K114D A192E",4
"lib1","SARS-CoV-2","TAACCTGGGTCTCCGC",2,6.62,6.25,-4.51,0.59,1.96,1.01,0,">1 nonsynonymous","F8S R179M",2
"lib1","SARS-CoV-2","TAACCTGTACCATCCA",2,44.69,9.67,-1.1,0.09,2.27,1.07,0,">1 nonsynonymous","R27L T46G",2
"lib1","SARS-CoV-2","TAACCTGTATCATAGT",2,47.98,6.46,-4.3,0.32,1.5,1.07,0.01,">1 nonsynonymous","Y39L Y91A T100S G117T",4
"lib1","SARS-CoV-2","TAACCTGTCATGATCT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","N92* G116K",2
"lib1","SARS-CoV-2","TAACCTTAAAATCATT",3,0,NA,NA,NA,NA,NA,NA,"stop","P54* R78S",2
"lib1","SARS-CoV-2","TAACCTTAAGAACTGA",13,170.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27W S36Q G86K I138C G166F V173A",6
"lib1","SARS-CoV-2","TAACCTTACAGAATTT",4,120.73,10.63,-0.14,0.04,2.93,1.01,0,">1 nonsynonymous","A33P Q163H",2
"lib1","SARS-CoV-2","TAACCTTACCATATCC",3,19.11,10.88,0.11,0.08,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACCTTATCTATAAG",4,55.38,10.76,0,0.05,2.91,1.05,0,"1 nonsynonymous","V37H",1
"lib1","SARS-CoV-2","TAACCTTCAAAATATT",5,2.45,NA,NA,NA,NA,NA,NA,"stop","N110S V153*",2
"lib1","SARS-CoV-2","TAACCTTGACAAGTGG",2,26.43,10.44,-0.33,0.12,2.42,1,0.01,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","TAACCTTGACCTAAGC",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113P F126L",2
"lib1","SARS-CoV-2","TAACCTTGATCTTAAC",1,10.23,10.62,-0.14,0.2,2.99,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAACCTTGCCGACAAT",5,83.88,10.23,-0.53,0.05,2.89,1,0,"1 nonsynonymous","W106Y",1
"lib1","SARS-CoV-2","TAACCTTGCGATATAG",2,54.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R27G P82R N120C",3
"lib1","SARS-CoV-2","TAACCTTGTACCTTCT",1,9.73,9.06,-1.7,0.41,1.74,1.12,0.06,">1 nonsynonymous","N1S E10D A42P V65S T148R L162M",6
"lib1","SARS-CoV-2","TAACCTTTTGCCATAT",1,19.83,10.78,0.01,0.1,2.9,1.09,0,"1 nonsynonymous","S200Q",1
"lib1","SARS-CoV-2","TAACCTTTTTAGCAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* A42G Y50M A89P",4
"lib1","SARS-CoV-2","TAACCTTTTTTCTATG",4,64.02,9.32,-1.44,0.11,2.57,1.19,0.01,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","TAACGAAAAATCCTAA",2,84.95,10.4,-0.37,0.05,2.84,1.07,0,">1 nonsynonymous","A14S L111H",2
"lib1","SARS-CoV-2","TAACGAAAAGTCGGTC",3,5.19,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","N13C F47W K56L G83D I104V R127C C158S",7
"lib1","SARS-CoV-2","TAACGAAAATGTCACC",10,192.91,10.17,-0.6,0.08,2.65,1,0,"1 nonsynonymous","I88L",1
"lib1","SARS-CoV-2","TAACGAAAATTTAGAA",1,41.05,10.1,-0.67,0.11,2.42,1,0,"1 nonsynonymous","G51F",1
"lib1","SARS-CoV-2","TAACGAAACGTACGCT",3,25.13,10.89,0.12,0.09,2.87,1.06,0,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","TAACGAAAGAATACAT",4,52.01,6,-4.76,2,3,1.19,0,">1 nonsynonymous","L5T G74N F134T R179Y",4
"lib1","SARS-CoV-2","TAACGAAAGCCTGAAA",5,19.02,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6S L122K L162S",3
"lib1","SARS-CoV-2","TAACGAAATAATGCAT",15,625.23,10.03,-0.74,0.04,2.84,1.02,0,">1 nonsynonymous","I2R N107K K199H",3
"lib1","SARS-CoV-2","TAACGAAATATAAGGC",2,30.95,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","F12D N130G G172S",3
"lib1","SARS-CoV-2","TAACGAACCTTGATCC",1,30.43,7.82,-2.95,0.35,1.5,1.07,0.03,">1 nonsynonymous","T3V V20P G74F",3
"lib1","SARS-CoV-2","TAACGAACTAGGTTCG",5,335.6,10.72,-0.04,0.07,2.88,1.08,0,">1 nonsynonymous","S43L L122E",2
"lib1","SARS-CoV-2","TAACGAAGACGTGAGC",3,29.16,10.25,-0.52,0.1,2.73,1.06,0.01,">1 nonsynonymous","V37F V103L",2
"lib1","SARS-CoV-2","TAACGAAGATGACTCT",2,12.02,8.76,-2.01,0.4,1.5,1,0.07,">1 nonsynonymous","T46G S69W Q84M",3
"lib1","SARS-CoV-2","TAACGAAGTCCAAAAG",6,70.3,10.57,-0.19,0.07,2.93,1,0,">1 nonsynonymous","G116L S129T",2
"lib1","SARS-CoV-2","TAACGAATGAACTTCG",8,82.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L A105D Y123V",3
"lib1","SARS-CoV-2","TAACGAATGTGCAACA",6,102.88,10.75,-0.01,0.07,2.84,1.05,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","TAACGAATTAAACACA",9,51.72,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","L38P S108N E141V N157T",4
"lib1","SARS-CoV-2","TAACGACAGGACTACC",10,98.19,9.9,-0.86,0.09,2.1,1.09,0,">1 nonsynonymous","N1Q S41R P133T",3
"lib1","SARS-CoV-2","TAACGACCACAAGCGA",3,39.82,9.09,-1.68,0.09,2.26,1.09,0,">1 nonsynonymous","V65M T85I T148P E154G",4
"lib1","SARS-CoV-2","TAACGACCCAGATTCA",6,43.48,8.53,-2.24,0.14,1.95,1.1,0.01,">1 nonsynonymous","T85R L95F F156T",3
"lib1","SARS-CoV-2","TAACGACCCTAGCGCA",4,75.53,10.76,-0.01,0.07,2.93,1.06,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","TAACGACCCTCACACT",4,86.04,10.76,-0.01,0.08,2.89,1.04,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","TAACGACCGAATCAAA",8,80.82,10.01,-0.75,0.08,2.23,1.03,0,">1 nonsynonymous","T15G V32Q K48S F160Y K198L",5
"lib1","SARS-CoV-2","TAACGACGGGTAAAAA",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88T P133N F156W",3
"lib1","SARS-CoV-2","TAACGACTATTTTCTT",3,26.29,10.37,-0.39,0.06,2.85,1.02,0,"1 nonsynonymous","C102I",1
"lib1","SARS-CoV-2","TAACGACTTCTCTACC",4,67.36,10.82,0.05,0.07,2.97,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAACGAGAAACAGAAC",2,2.93,NA,NA,NA,NA,NA,NA,"stop","P7*",1
"lib1","SARS-CoV-2","TAACGAGAAACCCACA",1,7.8,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6H S41H D75R P96S",4
"lib1","SARS-CoV-2","TAACGAGATTGCAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5P V37T V52D C61* F167P S200Y",6
"lib1","SARS-CoV-2","TAACGAGCTACATTTG",5,66.63,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D68K N107A G152N",3
"lib1","SARS-CoV-2","TAACGAGGAACTAATC",4,47.07,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C61L G74P K94R C158W",4
"lib1","SARS-CoV-2","TAACGAGTCCATACGG",2,9.6,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13P K56S N107L E186N",4
"lib1","SARS-CoV-2","TAACGATAAAAAGGAT",5,59.09,10.71,-0.05,0.06,2.93,1.04,0,"1 nonsynonymous","A42V",1
"lib1","SARS-CoV-2","TAACGATAACTAAACA",1,10.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I W106R",2
"lib1","SARS-CoV-2","TAACGATAAGAATAGA",5,45.61,10.59,-0.17,0.07,2.88,1.03,0,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","TAACGATAATTTAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13K A33L I104* S129C",4
"lib1","SARS-CoV-2","TAACGATATAAAGAAG",10,4.77,NA,NA,NA,NA,NA,NA,"stop","G9R T100P G174*",3
"lib1","SARS-CoV-2","TAACGATATTAAGAGG",2,81.99,8.33,-2.44,0.18,1.5,1.14,0.01,">1 nonsynonymous","Y39D N118R E141C",3
"lib1","SARS-CoV-2","TAACGATCTAAGTCTA",7,94.72,10.54,-0.22,0.06,2.93,1.04,0,"1 nonsynonymous","T3W",1
"lib1","SARS-CoV-2","TAACGATGATACGCAT",1,28.86,10.73,-0.04,0.08,2.99,1,0,">1 nonsynonymous","T100L P149L",2
"lib1","SARS-CoV-2","TAACGATTAAGATGTT",1,23.87,6.49,-4.27,0.25,1.5,1.09,0.01,">1 nonsynonymous","N58M Y175P",2
"lib1","SARS-CoV-2","TAACGATTCAACGACA",8,77.66,6.41,-4.36,0.31,1.5,1.13,0.01,">1 nonsynonymous","N107V Y143M",2
"lib1","SARS-CoV-2","TAACGATTGGATTTAA",2,37.24,10.69,-0.07,0.08,2.8,1.15,0,">1 nonsynonymous","P7D I104V",2
"lib1","SARS-CoV-2","TAACGATTTGCTACAG",7,63.42,6,-4.76,2,3,1.14,0,">1 nonsynonymous","A33S C61R A105S C150A",4
"lib1","SARS-CoV-2","TAACGATTTGGTGTTA",1,26.31,10.82,0.05,0.06,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGATTTTATCCCT",1,11.95,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y119I S139P",2
"lib1","SARS-CoV-2","TAACGCAACAAAACTA",6,64.9,8.67,-2.09,0.14,2.33,1.11,0.01,">1 nonsynonymous","D97T S113T Q144T",3
"lib1","SARS-CoV-2","TAACGCAACATTTGTA",9,39.64,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","E10S S41Y F47S D112G",4
"lib1","SARS-CoV-2","TAACGCAACTGAATTA",2,31.7,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","Y93S L122W",2
"lib1","SARS-CoV-2","TAACGCACAACGACAT",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L A42I I88P Y119S",4
"lib1","SARS-CoV-2","TAACGCACGTTAGGAA",2,43.82,10.69,-0.08,0.09,2.95,1.02,0,">1 nonsynonymous","T140S P149L",2
"lib1","SARS-CoV-2","TAACGCAGTTCCATCT",4,79.77,9.83,-0.94,0.12,2.07,1.05,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TAACGCATAAAAACTG",3,30.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86M W106L S184Q",3
"lib1","SARS-CoV-2","TAACGCATAACACCAT",5,4.19,NA,NA,NA,NA,NA,NA,"stop","S53*",1
"lib1","SARS-CoV-2","TAACGCATAAGTGAGC",4,84.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S36E F134R",3
"lib1","SARS-CoV-2","TAACGCATTTAGCTCG",10,148.22,10.39,-0.38,0.04,2.89,1,0,">1 nonsynonymous","S147Y F160L",2
"lib1","SARS-CoV-2","TAACGCCAAAACTTTT",2,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H Q84K L188T",3
"lib1","SARS-CoV-2","TAACGCCAATCTGCTG",2,18.71,8.87,-1.89,0.33,1.5,1,0.07,">1 nonsynonymous","P82T K87L P149W",3
"lib1","SARS-CoV-2","TAACGCCACTTGCCGA",11,86.63,10.76,0,0.04,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGCCCCAATTCCC",4,117.54,10.71,-0.05,0.05,2.91,1.04,0,">1 nonsynonymous","G9W Y35F T100V G152S",4
"lib1","SARS-CoV-2","TAACGCCCTATTGAGA",5,22.83,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C49N N107V N151T S164L",4
"lib1","SARS-CoV-2","TAACGCCCTGAATAGC",1,43.34,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2H C61M I138F N157F",4
"lib1","SARS-CoV-2","TAACGCCTCGTACAAG",1,6.36,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","N1L F8S K56R C61Y R124N G172L T201E",7
"lib1","SARS-CoV-2","TAACGCCTGGATCACT",2,22.92,10.78,0.01,0.09,2.94,1.05,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","TAACGCCTTAACAGCC",13,175.09,10.38,-0.39,0.04,2.87,1.06,0,">1 nonsynonymous","D98V N120A",2
"lib1","SARS-CoV-2","TAACGCGAACATTGGG",6,74.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N1W L122T P133T Q144L G174W",5
"lib1","SARS-CoV-2","TAACGCGAATTTCATG",1,9.68,11.02,0.26,0.18,2.99,1,0.01,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","TAACGCGACCACATGA",1,7.29,6.22,-4.54,1.18,3,1.05,0,">1 nonsynonymous","L5Y A14F Y39W A81T K94Y G101D S139D S147R",8
"lib1","SARS-CoV-2","TAACGCGAGACCAACC",1,15.69,7.33,-3.43,0.45,1.5,1.21,0.07,"1 nonsynonymous","C150R",1
"lib1","SARS-CoV-2","TAACGCGGATCTAAAG",10,88.71,8.82,-1.94,0.19,1.56,1.1,0.01,">1 nonsynonymous","K48F T100N P149M E154L",4
"lib1","SARS-CoV-2","TAACGCGTACTTTCGT",12,109.54,8.71,-2.05,0.09,2.63,1.15,0,">1 nonsynonymous","N64H Y143C",2
"lib1","SARS-CoV-2","TAACGCGTGATTAGGA",1,26.62,10.37,-0.39,0.04,2.97,1,0,">1 nonsynonymous","D98W N151S",2
"lib1","SARS-CoV-2","TAACGCTAAGTAAACG",5,27.53,9.15,-1.62,0.23,1.53,1.18,0.02,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","TAACGCTAGACCCAGG",1,8.15,10.44,-0.32,0.12,2.89,1.06,0.01,">1 nonsynonymous","Q163M P197Q",2
"lib1","SARS-CoV-2","TAACGCTCACGCCAAT",8,43.35,9.72,-1.04,0.15,1.97,1,0.01,">1 nonsynonymous","S36Y Y91A",2
"lib1","SARS-CoV-2","TAACGCTGATATGATT",10,110.91,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P54S L60S K94A D137I R179H",5
"lib1","SARS-CoV-2","TAACGCTGTTGTATGG",5,99.48,9.9,-0.86,0.04,2.9,1.04,0,">1 nonsynonymous","L125V H189Y",2
"lib1","SARS-CoV-2","TAACGGAAGATAATGG",4,0,NA,NA,NA,NA,NA,NA,"stop","T15* I28E C49W V77L G166M",5
"lib1","SARS-CoV-2","TAACGGACTACTGGAG",4,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74C D75Y T85L I142N C158M Q168L",6
"lib1","SARS-CoV-2","TAACGGAGAAATGTCG",10,141.99,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14I C61R P177L",3
"lib1","SARS-CoV-2","TAACGGAGAGATACAC",2,16.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R N64K P96C K128T N151M G155D Y165S",7
"lib1","SARS-CoV-2","TAACGGAGCCTAAACG",6,52.9,10.76,0,0.07,2.95,1.03,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","TAACGGAGCCTATCAT",2,5.38,6,-4.76,2,3,1.02,0,">1 nonsynonymous","F12R C49Y",2
"lib1","SARS-CoV-2","TAACGGAGGGTCCGAC",6,100.05,10.76,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGGAGTCCGCGCG",3,16.83,6,-4.76,1.46,3,1.15,0.01,"1 nonsynonymous","C102G",1
"lib1","SARS-CoV-2","TAACGGAGTTAGGCAA",9,117.66,6.99,-3.77,0.23,1.5,1.13,0.01,">1 nonsynonymous","G9L S108A G117P P149V",4
"lib1","SARS-CoV-2","TAACGGATACAAAAAT",1,8.42,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C49L Y143L",2
"lib1","SARS-CoV-2","TAACGGATGGCAAGGC",4,38.31,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A81G K94E",2
"lib1","SARS-CoV-2","TAACGGATGTCGGTCG",6,59.33,8.16,-2.61,0.25,1.5,1.13,0.02,">1 nonsynonymous","T15A Y35G S69R",3
"lib1","SARS-CoV-2","TAACGGCAGGGAGGCT",1,15,10.79,0.03,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGGCCCACAATGC",3,33.7,9.91,-0.85,0.12,2.31,1,0.01,">1 nonsynonymous","E10R G83S K114R K132L",4
"lib1","SARS-CoV-2","TAACGGGAAAGTGGCA",2,40.67,8.19,-2.58,0.12,2.43,1.12,0.01,">1 nonsynonymous","N4R E10T Y143T",3
"lib1","SARS-CoV-2","TAACGGGAGAGTGTGC",6,19.53,6.57,-4.2,0.48,1.5,1.16,0.03,">1 nonsynonymous","I88P F99Y",2
"lib1","SARS-CoV-2","TAACGGGCACCGTACT",6,2.02,NA,NA,NA,NA,NA,NA,"stop","S108F F134*",2
"lib1","SARS-CoV-2","TAACGGGTCGAGGACT",2,63.42,10.65,-0.11,0.07,2.85,1.09,0,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","TAACGGTAACCATACG",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T S41P Y121T",3
"lib1","SARS-CoV-2","TAACGGTAATTGATCC",1,12.27,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","N1S Y35H G86L G116N P133G F167L",6
"lib1","SARS-CoV-2","TAACGGTACGTATGAA",1,27.77,9.89,-0.87,0.11,2.57,1.07,0,">1 nonsynonymous","N40P C61G N151T",3
"lib1","SARS-CoV-2","TAACGGTTAGCCCGGG",8,77.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4S A18G F167V",3
"lib1","SARS-CoV-2","TAACGGTTGCACATCT",3,25.13,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G51H T55L F70I A81D A89V V180F",6
"lib1","SARS-CoV-2","TAACGGTTGTTAGTAT",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G D90L G116C F126S E135A K199E",6
"lib1","SARS-CoV-2","TAACGTAAACCCGAAA",9,61.76,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","V71G T85P",2
"lib1","SARS-CoV-2","TAACGTAACCAAGCTG",3,17.07,10.67,-0.09,0.06,2.96,1,0,">1 nonsynonymous","N4R Y66F",2
"lib1","SARS-CoV-2","TAACGTACACCCAGAC",8,97.6,10.71,-0.05,0.07,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGTACCCATAGCA",1,24.09,10.36,-0.4,0.08,2.97,1.03,0,">1 nonsynonymous","C61T L122C K132T",3
"lib1","SARS-CoV-2","TAACGTACTAAATCAA",2,5.59,6.29,-4.48,0.39,3,1,0,"1 nonsynonymous","F70V",1
"lib1","SARS-CoV-2","TAACGTAGTGCCTGTC",4,78.73,8.36,-2.4,0.13,2.69,1.08,0.01,"1 nonsynonymous","Y175A",1
"lib1","SARS-CoV-2","TAACGTATAATTTAGG",2,47.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9R P82F",2
"lib1","SARS-CoV-2","TAACGTATTAGGCTAA",7,106.28,10.76,0,0.06,2.95,1.04,0,"1 nonsynonymous","E141Q",1
"lib1","SARS-CoV-2","TAACGTCACTAAACAT",2,30.84,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G83I S113L G174T S184P",4
"lib1","SARS-CoV-2","TAACGTCCAAAAGATG",3,39.5,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T3K D97T N107W Y143Q F156L",5
"lib1","SARS-CoV-2","TAACGTCGCTAAAGGA",1,61.61,10.82,0.05,0.1,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGTCTAATCTTTA",2,12.06,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","V11M I104P G117Q E141M",4
"lib1","SARS-CoV-2","TAACGTCTCCCCTATT",6,81.91,10.78,0.01,0.07,2.92,1.06,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","TAACGTCTTTCGTTCT",2,124.94,10.8,0.04,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGTGAGCACAAAA",5,1.33,NA,NA,NA,NA,NA,NA,"stop","E10* S113Q R136V",3
"lib1","SARS-CoV-2","TAACGTGAGTGTCGGC",1,89.85,10.55,-0.21,0.04,2.89,1.03,0,"1 nonsynonymous","A14N",1
"lib1","SARS-CoV-2","TAACGTGATGAATGCG",11,6.05,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N40M T63W G117M L131G P149T",5
"lib1","SARS-CoV-2","TAACGTTAAGAGCAAG",8,59.09,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","V103L E154W",2
"lib1","SARS-CoV-2","TAACGTTATTAACTCG",1,46.84,10.62,-0.15,0.11,2.8,1.17,0.01,"1 nonsynonymous","V173R",1
"lib1","SARS-CoV-2","TAACGTTCCGAGAATG",4,11.52,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V103R G152N",2
"lib1","SARS-CoV-2","TAACGTTCTCGCCTTG",2,52.31,9.59,-1.17,0.11,2.17,1.07,0,">1 nonsynonymous","A14L V173G",2
"lib1","SARS-CoV-2","TAACGTTGAGACTAAA",1,17.08,10.82,0.05,0.08,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACGTTGCATCGCAC",4,51.4,9.5,-1.26,0.3,1.5,1,0.05,">1 nonsynonymous","Y35E N64P I138P",3
"lib1","SARS-CoV-2","TAACGTTTAACAATAT",6,150.32,8.91,-1.86,0.11,1.73,1.11,0,">1 nonsynonymous","N4I G9S L162T",3
"lib1","SARS-CoV-2","TAACGTTTACTTTTTC",1,41.78,10.25,-0.52,0.07,2.82,1.04,0,">1 nonsynonymous","L5N S45Y D59N",3
"lib1","SARS-CoV-2","TAACTAAAAAAAGGCG",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y A89S G146A",3
"lib1","SARS-CoV-2","TAACTAAACAATACAC",6,31.21,9.81,-0.96,0.14,2.06,1.01,0.01,"1 nonsynonymous","L131N",1
"lib1","SARS-CoV-2","TAACTAAACGGCAAGT",6,9.35,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6D Q84V D90N T100D F167S",5
"lib1","SARS-CoV-2","TAACTAAAGATAAGAA",3,99.48,8.34,-2.42,0.18,2.24,1.17,0.01,">1 nonsynonymous","Y39L Y175K",2
"lib1","SARS-CoV-2","TAACTAAATAAGTAGG",2,60.79,10.19,-0.57,0.09,2.68,1,0,">1 nonsynonymous","D97R K114R I138Y",3
"lib1","SARS-CoV-2","TAACTAAATACACTAC",1,54.95,8.41,-2.36,0.14,2.15,1.17,0.01,">1 nonsynonymous","L60V P96S N118T",3
"lib1","SARS-CoV-2","TAACTAAATTCCGTTA",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M S129L F167L",3
"lib1","SARS-CoV-2","TAACTAACAAATTCAT",1,44.46,10.66,-0.1,0.1,2.89,1.07,0,">1 nonsynonymous","Y39A L60Q D97K",3
"lib1","SARS-CoV-2","TAACTAACAAGACCCT",4,97.46,9.94,-0.82,0.07,2.41,1.02,0,">1 nonsynonymous","T63C P96N",2
"lib1","SARS-CoV-2","TAACTAACATCTTTAG",1,17.95,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","P54K F99S",2
"lib1","SARS-CoV-2","TAACTAACATGTATTT",7,97.73,10.68,-0.08,0.07,2.91,1.03,0,">1 nonsynonymous","L5N K132M",2
"lib1","SARS-CoV-2","TAACTAACGCAAATTT",3,31.45,10.64,-0.12,0.04,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTAACGGACTCAA",2,0.6,NA,NA,NA,NA,NA,NA,"stop","S69Q Y91* E135A N151C T201I",5
"lib1","SARS-CoV-2","TAACTAAGTTAGGAGC",4,25.9,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L95K V103L S184F",3
"lib1","SARS-CoV-2","TAACTAATAGAAGACG",1,41.17,10.75,-0.02,0.06,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTAATCAAAACTA",1,64.6,10.45,-0.32,0.05,2.87,1.07,0,">1 nonsynonymous","G83M K87T",2
"lib1","SARS-CoV-2","TAACTAATTTCCCGTA",5,25.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S45F L60G L95W F99C R136H G152T",6
"lib1","SARS-CoV-2","TAACTACAAATCATCG",1,17.61,10.35,-0.41,0.08,2.96,1.02,0,">1 nonsynonymous","K48L S147G L187Y",3
"lib1","SARS-CoV-2","TAACTACACCAATCAA",11,62.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5E L95N A105V",3
"lib1","SARS-CoV-2","TAACTACCTCAAACGA",4,61.4,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","I2Q F44L G83W D97V G117T K128Y E141A P149H E154H Q176S",10
"lib1","SARS-CoV-2","TAACTACCTTCGGTAA",1,17.85,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S108L N118K G146H G172R",4
"lib1","SARS-CoV-2","TAACTACGACGAAATA",10,127.29,9.65,-1.11,0.1,2.28,1.1,0,">1 nonsynonymous","T15V N107A",2
"lib1","SARS-CoV-2","TAACTACGTCCTCTGA",9,112.75,8.78,-1.98,0.19,1.5,1.15,0.01,">1 nonsynonymous","N92G E141S",2
"lib1","SARS-CoV-2","TAACTACTAAAGATGT",2,26.32,10.82,0.06,0.06,2.96,1,0,">1 nonsynonymous","V37G C61E",2
"lib1","SARS-CoV-2","TAACTACTGCCCTAAT",2,0.39,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib1","SARS-CoV-2","TAACTACTTTACCTAG",1,27.47,9.92,-0.84,0.1,2.53,1.06,0.01,">1 nonsynonymous","V52F T63L S129L",3
"lib1","SARS-CoV-2","TAACTACTTTTTAATA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I G83D A89S P169R",4
"lib1","SARS-CoV-2","TAACTAGAACTGAAAT",1,12.47,9.95,-0.82,0.25,1.99,1.03,0.03,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","TAACTAGATACATAAG",2,36.73,6.59,-4.17,0.42,1.5,1.13,0.02,">1 nonsynonymous","S36R A89V L111G P149D",4
"lib1","SARS-CoV-2","TAACTAGCAACCCTTT",3,3.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146F",1
"lib1","SARS-CoV-2","TAACTAGCAGTTTGAC",1,7.5,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","K56P Q144L T170L",3
"lib1","SARS-CoV-2","TAACTAGCATCACAAG",6,10.09,6,-4.76,1.82,1.5,1.09,0.08,">1 nonsynonymous","R27L G86L V103R P177L V182Q",5
"lib1","SARS-CoV-2","TAACTAGCGAACAACA",1,12.54,9.32,-1.45,0.11,2.41,1.12,0.01,">1 nonsynonymous","T3M N58Y K114L T170W",4
"lib1","SARS-CoV-2","TAACTAGCGCATCTCA",2,7.64,10.09,-0.67,0.32,1.78,1.02,0.02,">1 nonsynonymous","G9Y P82K N130H T201R",4
"lib1","SARS-CoV-2","TAACTAGGACGTCTCA",3,39.41,8.33,-2.44,0.21,1.5,1.09,0.01,">1 nonsynonymous","V37L A67Y K128L E135S",4
"lib1","SARS-CoV-2","TAACTAGGCTTAGGCA",2,24.61,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F8R E141L P161W C195S",4
"lib1","SARS-CoV-2","TAACTAGGTGTGATCA",8,95.08,10.69,-0.08,0.06,2.86,1.07,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","TAACTAGTGCGCGACC",4,95,10.2,-0.56,0.1,2.56,1,0,"1 nonsynonymous","V52D",1
"lib1","SARS-CoV-2","TAACTATAAAGCTAAA",2,81.06,10.33,-0.43,0.06,2.82,1.06,0,">1 nonsynonymous","F44T E141S",2
"lib1","SARS-CoV-2","TAACTATAACAAAAAA",2,74.54,10.45,-0.32,0.07,2.83,1.09,0,">1 nonsynonymous","K48I K87F",2
"lib1","SARS-CoV-2","TAACTATACGTTTCCC",1,28.94,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","D68W K128P",2
"lib1","SARS-CoV-2","TAACTATATCCTATGG",5,66.04,9.32,-1.45,0.09,2.72,1.1,0,">1 nonsynonymous","A42D G83K I142N",3
"lib1","SARS-CoV-2","TAACTATCAAAGAATC",2,37.6,10.76,0,0.08,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TAACTATCCCAAATTA",3,39.16,10.72,-0.04,0.08,2.89,1.03,0,">1 nonsynonymous","T55S E141V",2
"lib1","SARS-CoV-2","TAACTATCTGCGCAAG",9,1.65,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","TAACTATGAGGCAGAC",5,73.23,10.15,-0.61,0.05,2.87,1,0,">1 nonsynonymous","L60S G174R",2
"lib1","SARS-CoV-2","TAACTATGATTACCCC",6,30.03,6.16,-4.61,0.96,1.5,1.18,0.03,">1 nonsynonymous","L60T V71N A81T T100K A105F E135W",6
"lib1","SARS-CoV-2","TAACTATGCACATACA",8,45.95,6.35,-4.41,0.67,1.5,1.3,0.03,">1 nonsynonymous","V37C S45Y F62G S129L",4
"lib1","SARS-CoV-2","TAACTATGGGAGAAGC",12,213.03,10.09,-0.67,0.05,2.74,1,0,"1 nonsynonymous","P161E",1
"lib1","SARS-CoV-2","TAACTATGTACTGGCC",3,17.77,6.29,-4.48,0.85,1.5,1.16,0.05,">1 nonsynonymous","N40S L60A D98S D112Q G166P",5
"lib1","SARS-CoV-2","TAACTATTCGAAATAA",3,146.77,9.53,-1.24,0.1,1.96,1.13,0,"1 nonsynonymous","Y178K",1
"lib1","SARS-CoV-2","TAACTCAAAACGGATG",2,21.93,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","S43Y F44S K56E N64C A89V P96I P161S",7
"lib1","SARS-CoV-2","TAACTCAAAGGCATCG",8,15.68,8.77,-2,0.36,1.5,1,0.06,">1 nonsynonymous","A18H D59V A105V Q168A",4
"lib1","SARS-CoV-2","TAACTCAACTCATGCC",2,62.82,10.5,-0.26,0.06,2.9,1.08,0,">1 nonsynonymous","D97N G155T",2
"lib1","SARS-CoV-2","TAACTCAAGCTAAGAG",1,25.92,10.81,0.05,0.09,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTCAATAGGCTGT",3,7.23,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I88V N107M Y165L S200T",4
"lib1","SARS-CoV-2","TAACTCAATCCCCAAC",7,54.63,10.36,-0.4,0.06,2.68,1,0,">1 nonsynonymous","S45M S147W",2
"lib1","SARS-CoV-2","TAACTCACTAGAAGAA",3,128.57,10.21,-0.56,0.05,2.8,1.02,0,">1 nonsynonymous","G152D Y178S",2
"lib1","SARS-CoV-2","TAACTCACTGCGTGTT",3,52.28,10.92,0.15,0.09,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTCACTGTAACGT",2,29.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S41R N64R G86D Y119H K128M G174A",6
"lib1","SARS-CoV-2","TAACTCACTGTTCGAC",10,171.69,10.21,-0.55,0.03,2.84,1.03,0,">1 nonsynonymous","L38F V115W P149L",3
"lib1","SARS-CoV-2","TAACTCAGGCGAACCT",9,56.9,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V37G C49F C61G D97Y A192Q G196V",6
"lib1","SARS-CoV-2","TAACTCATAGTCCAGG",1,11.69,10.62,-0.15,0.26,1.79,1.04,0.03,">1 nonsynonymous","F12L A42W Q84L N110V",4
"lib1","SARS-CoV-2","TAACTCATCAACTAAG",2,58.71,10.34,-0.42,0.04,2.94,1.02,0,"1 nonsynonymous","V52W",1
"lib1","SARS-CoV-2","TAACTCATGATAAGTT",3,25.47,9.5,-1.27,0.07,2.58,1.09,0,">1 nonsynonymous","C61Q N120M Q144Y",3
"lib1","SARS-CoV-2","TAACTCATTACTTAGT",1,56.76,10.87,0.1,0.06,2.93,1.02,0,">1 nonsynonymous","V37T Q84T",2
"lib1","SARS-CoV-2","TAACTCATTCTATAAT",8,3.43,NA,NA,NA,NA,NA,NA,"stop","S41* D97G Q144A",3
"lib1","SARS-CoV-2","TAACTCATTTTCCCGG",1,26.14,8.83,-1.94,0.12,2.82,1.08,0.01,">1 nonsynonymous","T55P G117D",2
"lib1","SARS-CoV-2","TAACTCCAAATAAGTA",5,34.29,10.2,-0.57,0.09,2.76,1,0,">1 nonsynonymous","Y91I F160S",2
"lib1","SARS-CoV-2","TAACTCCAACTTGGGA",1,26.5,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I2G Q144L C150P",3
"lib1","SARS-CoV-2","TAACTCCAAGACGGAC",1,33.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N107T C150L T170P",3
"lib1","SARS-CoV-2","TAACTCCAATACGGCT",3,28.37,6.02,-4.74,1.57,1.5,1.23,0.06,">1 nonsynonymous","W106I S139H G155H T201K",4
"lib1","SARS-CoV-2","TAACTCCAATACTAGG",7,202.68,10.74,-0.03,0.04,2.91,1.04,0,">1 nonsynonymous","N1V S129A",2
"lib1","SARS-CoV-2","TAACTCCAGAATAAAC",3,9.07,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","F8L K94W A105L",3
"lib1","SARS-CoV-2","TAACTCCATAATATGA",6,68.98,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R124Y N171L",2
"lib1","SARS-CoV-2","TAACTCCATACTGCGG",3,0.13,NA,NA,NA,NA,NA,NA,"stop","W106K G116* E135T T170K",4
"lib1","SARS-CoV-2","TAACTCCATCTGAACC",2,29.28,7.55,-3.21,0.23,1.5,1.12,0.01,">1 nonsynonymous","A105G T170I",2
"lib1","SARS-CoV-2","TAACTCCCACCACGCA",4,27.93,9.98,-0.78,0.12,2.66,1.04,0.01,">1 nonsynonymous","W106F T140V",2
"lib1","SARS-CoV-2","TAACTCCCCAATGCAT",6,73.97,9.9,-0.87,0.08,2.49,1.03,0,">1 nonsynonymous","T55C F134C",2
"lib1","SARS-CoV-2","TAACTCCCGACCAATG",3,136.08,9.85,-0.92,0.06,2.77,1.03,0,">1 nonsynonymous","S43T G152H G174P H189C",4
"lib1","SARS-CoV-2","TAACTCCGAAGGTTGA",5,58.76,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9S G51C S69K T201P",4
"lib1","SARS-CoV-2","TAACTCCGATTAGAGT",1,31.29,10.66,-0.1,0.07,2.96,1.05,0,"1 nonsynonymous","S43I",1
"lib1","SARS-CoV-2","TAACTCCGCTTCCACA",5,122.56,9.28,-1.49,0.06,2.9,1.09,0,">1 nonsynonymous","T3H P7N A145L Q168R",4
"lib1","SARS-CoV-2","TAACTCCTACAATCCC",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113W C150Y R179F K199H",4
"lib1","SARS-CoV-2","TAACTCGAGATCACCC",11,106.45,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F47L Q168L R179Y",3
"lib1","SARS-CoV-2","TAACTCGCAATAAACC",15,203.69,10.78,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","K26Q",1
"lib1","SARS-CoV-2","TAACTCGCCCGGTTCC",3,0.33,NA,NA,NA,NA,NA,NA,"stop","R16* Y123A",2
"lib1","SARS-CoV-2","TAACTCGTCTTCTACC",1,9.12,7.14,-3.63,0.43,1.67,1,0.08,">1 nonsynonymous","G83S G101V Y175I",3
"lib1","SARS-CoV-2","TAACTCGTTACCAGAG",4,62.4,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10H S41L S53V Y143Q P149A Q163N",6
"lib1","SARS-CoV-2","TAACTCTAAACCTTCC",3,81.31,10.61,-0.16,0.04,2.92,1.05,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","TAACTCTAAAGTAAGA",4,16.67,8.36,-2.4,0.13,2.48,1.04,0.01,"1 nonsynonymous","N157Y",1
"lib1","SARS-CoV-2","TAACTCTAACCTCGAA",20,265.72,10.77,0,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTCTAATCGAAAA",1,32.77,9.61,-1.16,0.12,2.82,1.09,0.01,">1 nonsynonymous","S41H T170G",2
"lib1","SARS-CoV-2","TAACTCTACCGGCGAA",1,53.22,10.72,-0.05,0.06,2.92,1.03,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","TAACTCTACTTACTAC",8,66.99,9.34,-1.43,0.23,1.69,1.11,0.02,">1 nonsynonymous","K48N T63F D97H V181I",4
"lib1","SARS-CoV-2","TAACTCTAGCTTAAAT",5,17.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y39P C49W T85E C150S Q168L",5
"lib1","SARS-CoV-2","TAACTCTCTCACTTAA",2,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R E141K V153L Y159D V181R C195F",6
"lib1","SARS-CoV-2","TAACTCTGAAAAGCGG",2,32.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68L L122V",2
"lib1","SARS-CoV-2","TAACTCTGCTGTATTA",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","TAACTCTTATGGCCAG",6,107.81,10.77,0,0.08,2.92,1.05,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","TAACTCTTATTTCTTC",4,73.39,6.08,-4.69,1.05,1.5,1.26,0.02,">1 nonsynonymous","G51S I88R P161K",3
"lib1","SARS-CoV-2","TAACTCTTCAAATTCG",15,97.9,9.84,-0.93,0.1,2.04,1.08,0,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","TAACTCTTCGAGGTAG",4,11.57,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","C102H F126H",2
"lib1","SARS-CoV-2","TAACTCTTGATAGAGT",3,36.07,10.06,-0.71,0.1,2.01,1.03,0,">1 nonsynonymous","A14Y K56L",2
"lib1","SARS-CoV-2","TAACTCTTGTGCGATT",6,44.43,10.35,-0.41,0.05,2.94,1,0,">1 nonsynonymous","C6V P54L",2
"lib1","SARS-CoV-2","TAACTGAAAGATACTC",1,25.71,10.26,-0.5,0.1,2.66,1.03,0.01,">1 nonsynonymous","I104T N110R",2
"lib1","SARS-CoV-2","TAACTGAACAAATATT",7,0.81,NA,NA,NA,NA,NA,NA,"stop","A89* Y165K",2
"lib1","SARS-CoV-2","TAACTGAACCAGTATA",1,26.18,10.82,0.05,0.08,2.85,1.12,0,"1 nonsynonymous","T201W",1
"lib1","SARS-CoV-2","TAACTGAACGAGGAAA",5,68.59,10.67,-0.09,0.07,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTGAACTTCATTT",4,59.34,10.61,-0.15,0.08,2.9,1.06,0,">1 nonsynonymous","G9F T201Q",2
"lib1","SARS-CoV-2","TAACTGAAGTTAGCAA",1,18.96,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","R73P P149S L162W",3
"lib1","SARS-CoV-2","TAACTGAATAACCACC",3,29.06,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A18W P96N V103W V173A",4
"lib1","SARS-CoV-2","TAACTGACACATACCA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","V11* D97N",2
"lib1","SARS-CoV-2","TAACTGACCACTTCTA",6,117.17,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37D I88N V103E L122Y",4
"lib1","SARS-CoV-2","TAACTGATAAAACCCA",3,19.97,9.69,-1.07,0.24,1.69,1.06,0.03,">1 nonsynonymous","Y39V V182S",2
"lib1","SARS-CoV-2","TAACTGATCATATTAG",3,14.9,6.95,-3.81,0.35,1.5,1.07,0.04,">1 nonsynonymous","D97T V103L G155S",3
"lib1","SARS-CoV-2","TAACTGATTAGAACAT",3,76.15,8.43,-2.33,0.16,2.31,1.11,0.01,">1 nonsynonymous","A42R T46S V115H Y175M T201W",5
"lib1","SARS-CoV-2","TAACTGATTTGAAAAA",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D N130E",2
"lib1","SARS-CoV-2","TAACTGCACATAAAAC",4,17.09,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N107M G172D",2
"lib1","SARS-CoV-2","TAACTGCAGTTTGAGA",9,290.25,10.62,-0.14,0.03,2.91,1.05,0,">1 nonsynonymous","A33S V37T K198L",3
"lib1","SARS-CoV-2","TAACTGCCCGGAGGAA",4,34.68,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","P96L N107F L187K",3
"lib1","SARS-CoV-2","TAACTGCCGAATACAC",1,21.51,8.97,-1.8,0.07,2.68,1.08,0,">1 nonsynonymous","N157S S184L",2
"lib1","SARS-CoV-2","TAACTGCGCGTATGTG",1,28.18,8.74,-2.02,0.09,2.82,1.12,0,">1 nonsynonymous","N120S G166I",2
"lib1","SARS-CoV-2","TAACTGGAAGACCAAT",4,44.59,6.29,-4.48,0.64,1.5,1.17,0.02,">1 nonsynonymous","S45A N92V L131A",3
"lib1","SARS-CoV-2","TAACTGGACAAATTAT",7,144.68,8.4,-2.36,0.14,1.89,1.12,0.01,">1 nonsynonymous","D90G Y119L",2
"lib1","SARS-CoV-2","TAACTGGCACTTGCCG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R F44D N64Y W106F R179S G196T",6
"lib1","SARS-CoV-2","TAACTGTAACAGCAAC",2,22.2,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N107L Y119K S129R",3
"lib1","SARS-CoV-2","TAACTGTAATCCATTC",1,11.96,10.83,0.06,0.12,2.99,1,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","TAACTGTAATGGAGAG",2,18.91,9.35,-1.41,0.13,1.72,1.13,0.01,">1 nonsynonymous","E10Y F44L G152H",3
"lib1","SARS-CoV-2","TAACTGTAGCCCAAGA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","TAACTGTCAAATAAAA",3,28.64,10.14,-0.62,0.07,2.05,1.05,0,">1 nonsynonymous","V20T Q168R",2
"lib1","SARS-CoV-2","TAACTGTCATGCTGCG",9,27.81,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","S53F S69L N118S",3
"lib1","SARS-CoV-2","TAACTGTGTAATCCAA",2,44.21,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T63H L122H L162S",3
"lib1","SARS-CoV-2","TAACTGTTAACACTGT",9,146.81,10.74,-0.03,0.06,2.88,1.07,0,"1 nonsynonymous","L187G",1
"lib1","SARS-CoV-2","TAACTGTTAGAAGGGT",7,45.86,10.58,-0.18,0.05,2.98,1,0,">1 nonsynonymous","T3A K56M S139D",3
"lib1","SARS-CoV-2","TAACTGTTATTGTAGT",2,7.5,9.91,-0.86,0.18,1.76,1.04,0.01,">1 nonsynonymous","N13Y V37A W106Q",3
"lib1","SARS-CoV-2","TAACTGTTGCGGAATT",10,60.22,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K26P P82G L125R F160V P197L",5
"lib1","SARS-CoV-2","TAACTTAAACATCATT",1,3.25,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAACTTAAATCGACTA",6,75.02,6,-4.76,0.76,3,1.16,0,">1 nonsynonymous","T63F Y121S I142K",3
"lib1","SARS-CoV-2","TAACTTAACATGACGT",1,43.16,10.76,0,0.06,2.88,1.06,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","TAACTTAACCATCAGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","TAACTTAACGAATTGA",2,55.31,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A18L Y50T N64L T85H E135T Y165K",6
"lib1","SARS-CoV-2","TAACTTAACTATAATT",1,12.91,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S36M S41P P96L L122H H189R",5
"lib1","SARS-CoV-2","TAACTTAATACACAGC",6,58.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9L I80T P149F F160R",4
"lib1","SARS-CoV-2","TAACTTAATGACCACG",12,126.78,10.7,-0.06,0.04,2.93,1.04,0,">1 nonsynonymous","Y39M K56N S129I",3
"lib1","SARS-CoV-2","TAACTTACAAAACCCG",3,42.1,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y39S C61M P96C K114T Q163N",5
"lib1","SARS-CoV-2","TAACTTACACGGTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","TAACTTACCGGGAGAT",1,72.87,10.07,-0.7,0.06,2.69,1.02,0,">1 nonsynonymous","G51C L122Y",2
"lib1","SARS-CoV-2","TAACTTACGGGAAAGT",3,31.85,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","A18T E76S A89F",3
"lib1","SARS-CoV-2","TAACTTAGCCCCGCCG",2,54.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39F V52S K114S Y143C",4
"lib1","SARS-CoV-2","TAACTTAGCCCGACAG",4,80.69,10.55,-0.22,0.05,2.91,1.03,0,"1 nonsynonymous","L57I",1
"lib1","SARS-CoV-2","TAACTTAGGAAGAGGA",6,14.27,7.2,-3.56,0.48,1.5,1,0.05,">1 nonsynonymous","V103P F167H",2
"lib1","SARS-CoV-2","TAACTTAGGCAAAACC",1,15.99,6.43,-4.33,0.47,3,1.16,0.01,">1 nonsynonymous","F62I R73G T85V D97F T140Y",5
"lib1","SARS-CoV-2","TAACTTAGGCCAGATC",1,6.76,10.18,-0.58,0.14,3,1.04,0.01,">1 nonsynonymous","Y39L F156T",2
"lib1","SARS-CoV-2","TAACTTATGCGTATGC",3,1.09,NA,NA,NA,NA,NA,NA,"stop","V103* D137H",2
"lib1","SARS-CoV-2","TAACTTATTAACGGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* I88V",2
"lib1","SARS-CoV-2","TAACTTATTCATCGAA",4,0.17,NA,NA,NA,NA,NA,NA,"stop","S41I V77* K87R F99C N107A E141L",6
"lib1","SARS-CoV-2","TAACTTATTCCCGACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S T63M W106I",3
"lib1","SARS-CoV-2","TAACTTCAAATACGCG",9,543.33,10.74,-0.02,0.04,2.89,1.06,0,">1 nonsynonymous","K128S T201A",2
"lib1","SARS-CoV-2","TAACTTCAAATCCATA",4,146.04,10.33,-0.43,0.04,2.94,1.04,0,"1 nonsynonymous","E154P",1
"lib1","SARS-CoV-2","TAACTTCACATTCAGG",4,14.44,10.51,-0.26,0.06,2.88,1.1,0,">1 nonsynonymous","G9R A22S",2
"lib1","SARS-CoV-2","TAACTTCACCCATAGA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","I28K F47T G146W G166*",4
"lib1","SARS-CoV-2","TAACTTCAGAATCAAA",2,17.54,6,-4.76,1.16,3,1.23,0.02,">1 nonsynonymous","G83D D90M I138S F160L L183R",5
"lib1","SARS-CoV-2","TAACTTCCTAATGGAA",6,39.17,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F99P F167R",2
"lib1","SARS-CoV-2","TAACTTCGAATAACCT",6,53.97,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P7V K56R G83R I142F C150S Y175A",6
"lib1","SARS-CoV-2","TAACTTCGAGTAATTA",14,207.74,10.29,-0.47,0.03,2.94,1,0,">1 nonsynonymous","Y35I T170W",2
"lib1","SARS-CoV-2","TAACTTCTAAATCCGC",5,139.79,6,-4.76,0.69,1.91,1.16,0.01,">1 nonsynonymous","F126P F156S",2
"lib1","SARS-CoV-2","TAACTTCTTAGGGGCA",1,8.75,10.39,-0.37,0.13,3,1,0,">1 nonsynonymous","D90W A190S",2
"lib1","SARS-CoV-2","TAACTTGAAGTTCGCC",5,90.8,10.79,0.02,0.08,2.93,1.05,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","TAACTTGAATGCTGTG",10,87.38,9.64,-1.13,0.1,1.96,1.11,0,">1 nonsynonymous","A33Q N92S K198S",3
"lib1","SARS-CoV-2","TAACTTGAGCTACGAA",2,6.36,10.84,0.07,0.11,3,1,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","TAACTTGAGGGTAATC",7,45.57,6,-4.76,1.07,1.83,1.17,0,">1 nonsynonymous","A42S L111P Y178D E186Y",4
"lib1","SARS-CoV-2","TAACTTGATACTAAAT",8,26.94,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y66I R127W",2
"lib1","SARS-CoV-2","TAACTTGATCACCCAT",1,28.26,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","C6P V20E D97Y",3
"lib1","SARS-CoV-2","TAACTTGATTATCCAT",1,20.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G L183A K198M",3
"lib1","SARS-CoV-2","TAACTTGATTATTAAA",1,71.59,6,-4.76,1.62,1.5,1.18,0.02,">1 nonsynonymous","E10L I28S F99Y L162V T201N",5
"lib1","SARS-CoV-2","TAACTTGCAAGTTTTT",3,60.1,9.09,-1.67,0.11,2.59,1.16,0,">1 nonsynonymous","L5C S36L Y143L",3
"lib1","SARS-CoV-2","TAACTTGCACGTTTTA",6,110.09,8.29,-2.47,0.21,1.94,1.1,0.02,">1 nonsynonymous","K56L Y91C Y119W",3
"lib1","SARS-CoV-2","TAACTTGTATACAAAG",1,27.64,7.39,-3.37,0.44,1.5,1.21,0.05,">1 nonsynonymous","P7W P96T R136L E141C",4
"lib1","SARS-CoV-2","TAACTTGTCTAGAGAT",6,137.78,10.78,0.01,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTTTAATAACCCC",4,5.91,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","L5H E10T A81G I104N R127S",5
"lib1","SARS-CoV-2","TAACTTTAGAATATTT",2,67.98,10.76,0,0.06,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAACTTTAGCTACGGA",1,8.43,10.82,0.06,0.11,2.94,1,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","TAACTTTAGGTAGTAA",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N Y175F V181P",3
"lib1","SARS-CoV-2","TAACTTTCAATAGGAT",10,71.53,6,-4.76,2,3,1.22,0,">1 nonsynonymous","N4L D90K R127L T201C",4
"lib1","SARS-CoV-2","TAACTTTCCCACTTGG",3,13.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S19I K87F W106K",3
"lib1","SARS-CoV-2","TAACTTTGCACCATGC",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122Y E154N L183A",3
"lib1","SARS-CoV-2","TAACTTTTATATATTC",3,44.23,10.65,-0.12,0.05,2.91,1.05,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","TAACTTTTATCCTCCT",3,18.12,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S19F D90A R127L P149L",4
"lib1","SARS-CoV-2","TAACTTTTATTAGAAC",5,40.39,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V37L Y50L A81Y G117Y S129N F167S G196V",7
"lib1","SARS-CoV-2","TAACTTTTGGACCGTG",5,24.01,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","S19K S43I Q144D F156C T201L",5
"lib1","SARS-CoV-2","TAAGAAAAAACTGGAC",7,41.07,6.3,-4.46,0.47,1.5,1.14,0.01,">1 nonsynonymous","N58Y A89W A105N T140S P169M",5
"lib1","SARS-CoV-2","TAAGAAAAAAGAATAA",1,43.12,10.62,-0.15,0.05,2.96,1.04,0,">1 nonsynonymous","A14S N64Q",2
"lib1","SARS-CoV-2","TAAGAAAAAAGTTCCA",1,31.11,10.99,0.23,0.11,2.88,1.03,0,">1 nonsynonymous","G9D G155K",2
"lib1","SARS-CoV-2","TAAGAAAAAATCCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50K D59* N118A",3
"lib1","SARS-CoV-2","TAAGAAAAAGGCCGTA",3,48.4,10.14,-0.62,0.08,2.63,1,0,">1 nonsynonymous","F62L V173S",2
"lib1","SARS-CoV-2","TAAGAAAAAGGTAACT",12,127.89,9.71,-1.05,0.06,2.75,1.1,0,">1 nonsynonymous","R16T N120S I142N",3
"lib1","SARS-CoV-2","TAAGAAAACATGTGCA",2,1.01,NA,NA,NA,NA,NA,NA,"stop","A14* E141T",2
"lib1","SARS-CoV-2","TAAGAAAACGACGCGG",3,23.86,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","C49V L125V F167S",3
"lib1","SARS-CoV-2","TAAGAAAACTGCAAAG",7,93.59,10.71,-0.05,0.06,2.92,1.07,0,">1 nonsynonymous","I2L V52L",2
"lib1","SARS-CoV-2","TAAGAAAACTGGTGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","K94D C150* T201R",3
"lib1","SARS-CoV-2","TAAGAAAAGAGTGACA",1,14.32,10.78,0.02,0.15,2.84,1.15,0.02,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","TAAGAAAAGATATCAA",5,46.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8L T46L N64C V77M G83V P149I",6
"lib1","SARS-CoV-2","TAAGAAAAGCAATTGA",5,138.42,9.42,-1.34,0.09,2.6,1.13,0,">1 nonsynonymous","P96K F156L",2
"lib1","SARS-CoV-2","TAAGAAAAGCACTATG",2,39.12,10.74,-0.03,0.11,2.75,1.14,0.01,">1 nonsynonymous","N4T E154L F160N",3
"lib1","SARS-CoV-2","TAAGAAAAGCTCTCCA",5,54.4,9.51,-1.25,0.18,1.84,1.1,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TAAGAAAATACCAATT",3,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L L57M I104S N107L F160C",5
"lib1","SARS-CoV-2","TAAGAAAATACTAACG",8,61.11,10.72,-0.04,0.08,2.84,1.11,0,"1 nonsynonymous","N120H",1
"lib1","SARS-CoV-2","TAAGAAAATCAAGACA",1,9.68,7.47,-3.29,0.29,1.5,1.07,0.02,">1 nonsynonymous","T3G V52D Y119I",3
"lib1","SARS-CoV-2","TAAGAAAATTGTTGGA",2,43.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37S D90M F99S G117V R124T V153D R179T",7
"lib1","SARS-CoV-2","TAAGAAACTTTCCTGG",15,188.08,10.46,-0.3,0.04,2.84,1.03,0,">1 nonsynonymous","S139Q Q163Y G174R",3
"lib1","SARS-CoV-2","TAAGAAAGAAAAGCAG",5,53.06,8.79,-1.98,0.21,1.5,1.19,0.01,">1 nonsynonymous","C6S F185N",2
"lib1","SARS-CoV-2","TAAGAAAGAGAGAGCA",1,10.95,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","F17R L60Y D90G Y143T P161Y",5
"lib1","SARS-CoV-2","TAAGAAAGGATTAAGA",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V Y91T G116R Y121S R127V G166L",6
"lib1","SARS-CoV-2","TAAGAAATAAAAAGTT",1,30.47,9.28,-1.48,0.07,2.94,1.06,0,">1 nonsynonymous","N110M Y119N",2
"lib1","SARS-CoV-2","TAAGAAATACAATCTA",1,23.62,10.37,-0.4,0.08,2.28,1.05,0,">1 nonsynonymous","F17A K199R",2
"lib1","SARS-CoV-2","TAAGAAATACGGGACT",3,43.28,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","A105R F160T",2
"lib1","SARS-CoV-2","TAAGAAATAGAAATAC",5,0.66,NA,NA,NA,NA,NA,NA,"stop","T55* I88* L122T G166M",4
"lib1","SARS-CoV-2","TAAGAAATGGGATAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99M V181C",2
"lib1","SARS-CoV-2","TAAGAAATTAGTACAT",1,25.29,8.33,-2.44,0.09,2.45,1.07,0,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","TAAGAAATTTCACAAA",6,36.07,10.62,-0.14,0.08,2.91,1.08,0,"1 nonsynonymous","N110I",1
"lib1","SARS-CoV-2","TAAGAACAAGACCAAA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V N107S",2
"lib1","SARS-CoV-2","TAAGAACACAAACGAA",6,122.06,6.95,-3.82,0.24,1.5,1.13,0.01,">1 nonsynonymous","K48H Y143K",2
"lib1","SARS-CoV-2","TAAGAACATAACATCC",4,55.25,10.3,-0.46,0.07,2.84,1.03,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","TAAGAACCATTTGAAA",3,28.77,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","S53F D90C Y121F K128L F167I",5
"lib1","SARS-CoV-2","TAAGAACCCTAAACGT",3,14.32,9.31,-1.46,0.25,1.95,1.17,0.03,">1 nonsynonymous","K56M N64W Q144L",3
"lib1","SARS-CoV-2","TAAGAACGCAGCGTAC",2,61.27,8.93,-1.84,0.18,1.56,1.15,0.01,"1 nonsynonymous","F70L",1
"lib1","SARS-CoV-2","TAAGAACGGAACCATC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","L5M W106S L131* C158* K199N",5
"lib1","SARS-CoV-2","TAAGAACGTACTTTCT",7,105.31,9.89,-0.88,0.09,2.32,1.07,0,">1 nonsynonymous","G51L V115H",2
"lib1","SARS-CoV-2","TAAGAACGTGTGCCTA",1,12.52,6.07,-4.69,0.4,3,1.14,0,">1 nonsynonymous","A89F L122G T170G R179A",4
"lib1","SARS-CoV-2","TAAGAACTAGGAATAG",6,0.31,NA,NA,NA,NA,NA,NA,"stop","F62G L125F P149L L162*",4
"lib1","SARS-CoV-2","TAAGAACTTGAAACCG",5,7.69,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib1","SARS-CoV-2","TAAGAAGAAGCGATGG",6,76.04,10.76,-0.01,0.08,2.95,1.03,0,">1 nonsynonymous","N40H T100V",2
"lib1","SARS-CoV-2","TAAGAAGATATAATCA",6,38.32,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N13P I28K G116L P133H G155C",5
"lib1","SARS-CoV-2","TAAGAAGCAGGTAAAC",6,29.98,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","S45C F99L Y119D",3
"lib1","SARS-CoV-2","TAAGAAGCATAAAAGG",2,1.4,NA,NA,NA,NA,NA,NA,"stop","A14F C61A D68N N92* P149R E186A",6
"lib1","SARS-CoV-2","TAAGAAGGAGTCAGGC",5,73.19,6,-4.76,2,3,1.18,0,">1 nonsynonymous","R78L D90C V103R I138A Q144I",5
"lib1","SARS-CoV-2","TAAGAAGGCTTAGAAC",7,45.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Y D112V L122S K128M",4
"lib1","SARS-CoV-2","TAAGAAGGGACTTATG",9,2.1,NA,NA,NA,NA,NA,NA,"stop","G146H T170M Y175* H189S",4
"lib1","SARS-CoV-2","TAAGAAGGTACACGGT",4,77.01,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I2V V37S T100A Y165H P177L T201N",6
"lib1","SARS-CoV-2","TAAGAAGTCTATTAAA",2,22.24,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","C6F F99E N130S",3
"lib1","SARS-CoV-2","TAAGAAGTGCTAACTA",3,19.93,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","F12D C49V T100A Y119S",4
"lib1","SARS-CoV-2","TAAGAATAACAATTGT",9,108.43,6,-4.76,0.65,1.5,1.14,0.01,">1 nonsynonymous","N40M D98S C102F W106G",4
"lib1","SARS-CoV-2","TAAGAATACATCAACG",1,48.03,10.64,-0.12,0.09,2.84,1.07,0,">1 nonsynonymous","R136K F160S",2
"lib1","SARS-CoV-2","TAAGAATATCGATAAG",3,16.59,10.3,-0.47,0.08,2.94,1.03,0,">1 nonsynonymous","N40S A81Q T140M",3
"lib1","SARS-CoV-2","TAAGAATATGGGACAA",4,28.88,8.04,-2.72,0.13,1.96,1.12,0.01,">1 nonsynonymous","K26F C31Y T100I Y119T T201V",5
"lib1","SARS-CoV-2","TAAGAATCCGAAAGGC",3,45.97,9.79,-0.98,0.13,2.02,1.08,0.01,">1 nonsynonymous","Y50T C61H",2
"lib1","SARS-CoV-2","TAAGAATCCTCAACGC",3,0.77,NA,NA,NA,NA,NA,NA,"stop","Y35* A67T K132Y Y143V",4
"lib1","SARS-CoV-2","TAAGAATCGCAGGATG",7,88.73,10.37,-0.4,0.04,2.89,1.05,0,">1 nonsynonymous","V32S G152T",2
"lib1","SARS-CoV-2","TAAGAATGCAAATAAG",2,18.54,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A145V G172Q",2
"lib1","SARS-CoV-2","TAAGAATGCAACATAA",3,10.94,6,-4.76,2,1.5,1.3,0.03,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","TAAGAATTAATAGAAC",7,79.82,7.04,-3.72,0.27,1.5,1.14,0.02,">1 nonsynonymous","E10Q G51R A81S P96T T148S",5
"lib1","SARS-CoV-2","TAAGAATTATCATCCC",4,129.27,9.17,-1.59,0.19,1.5,1.15,0.01,">1 nonsynonymous","V71C A105G",2
"lib1","SARS-CoV-2","TAAGAATTCACTAAAT",5,34.77,6,-4.76,2,3,1.17,0,">1 nonsynonymous","K56R F70I L131F I142H",4
"lib1","SARS-CoV-2","TAAGAATTGATAGACA",1,28.85,10.61,-0.15,0.05,2.95,1.04,0,">1 nonsynonymous","S41Y T85A",2
"lib1","SARS-CoV-2","TAAGAATTTCTAGGCC",7,81.81,10.67,-0.1,0.06,2.9,1.07,0,"1 nonsynonymous","Y121H",1
"lib1","SARS-CoV-2","TAAGAATTTTCTAAAT",5,41.5,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V71K D112V",2
"lib1","SARS-CoV-2","TAAGACAAAGCGACTA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","T15L Q84V F185*",3
"lib1","SARS-CoV-2","TAAGACAATAAACTAG",3,61.56,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N4L F8I G83M Y175G",4
"lib1","SARS-CoV-2","TAAGACAATCATAAAA",5,40.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Q D90Y",2
"lib1","SARS-CoV-2","TAAGACAATGCTGAGG",8,0.5,NA,NA,NA,NA,NA,NA,"stop","L162* G174R",2
"lib1","SARS-CoV-2","TAAGACAATTCCATAC",8,250.67,10.69,-0.07,0.06,2.91,1.04,0,">1 nonsynonymous","A42G T140H",2
"lib1","SARS-CoV-2","TAAGACAATTGGGGTT",2,7.74,10.82,0.06,0.14,2.96,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAAGACACACACTAAC",6,241.93,10.22,-0.55,0.04,2.79,1.04,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","TAAGACACCGCAAAGA",1,12.76,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6N A42P G51W V77Y T100V D137R Y175N T201L",8
"lib1","SARS-CoV-2","TAAGACACCTGCACCT",5,11.01,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","I80K",1
"lib1","SARS-CoV-2","TAAGACACTATATCCC",7,59.02,10.48,-0.28,0.05,2.92,1,0,">1 nonsynonymous","T46Y N130S S139R Q168R",4
"lib1","SARS-CoV-2","TAAGACAGGGTCGCGA",9,181.14,9.6,-1.16,0.09,2.31,1.11,0,">1 nonsynonymous","P7G Y121V",2
"lib1","SARS-CoV-2","TAAGACAGGGTGTAAT",2,59.12,9.78,-0.98,0.19,2.01,1.04,0.01,">1 nonsynonymous","S19K C61N K198L",3
"lib1","SARS-CoV-2","TAAGACAGTGAAACAG",11,156.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T15S L95R T201V",3
"lib1","SARS-CoV-2","TAAGACATGAAAAGAA",2,15.86,9.85,-0.92,0.13,2,1.01,0.01,">1 nonsynonymous","T3A Y50I",2
"lib1","SARS-CoV-2","TAAGACATTCACAAGT",5,4.61,NA,NA,NA,NA,NA,NA,"stop","E76* Y91V A105F G146N",4
"lib1","SARS-CoV-2","TAAGACCAAATAACAA",4,1.16,NA,NA,NA,NA,NA,NA,"stop","D68I G86* A105K K114A",4
"lib1","SARS-CoV-2","TAAGACCAAATTAGAC",3,40.84,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","D90T G155T T170V",3
"lib1","SARS-CoV-2","TAAGACCAATGGTAAT",2,0.49,NA,NA,NA,NA,NA,NA,"stop","T3L S69H G83S K94* E141G",5
"lib1","SARS-CoV-2","TAAGACCAATTTAAAA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","W23Q S69V P82Q G117* L183N",5
"lib1","SARS-CoV-2","TAAGACCACACTGGTT",6,140.19,10.73,-0.04,0.08,2.87,1.07,0,"1 nonsynonymous","N64H",1
"lib1","SARS-CoV-2","TAAGACCACAGCCGCA",3,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N S41Y A81V N107R P149Y N157D",6
"lib1","SARS-CoV-2","TAAGACCGCGAACATG",3,2.84,NA,NA,NA,NA,NA,NA,"stop","Y91* T140P V181I",3
"lib1","SARS-CoV-2","TAAGACCGGGACAAGG",3,0.61,NA,NA,NA,NA,NA,NA,"stop","T3* V77R Y93S F160Q",4
"lib1","SARS-CoV-2","TAAGACCTAACTAGTG",6,1496.12,8.14,-2.63,0.13,1.63,1.1,0.01,">1 nonsynonymous","S45I C61E S164I",3
"lib1","SARS-CoV-2","TAAGACCTAGTTGAAA",1,33.63,9.06,-1.71,0.16,1.78,1.18,0.01,">1 nonsynonymous","K56G Y91V N120V K198L",4
"lib1","SARS-CoV-2","TAAGACCTATAGAAAC",3,20.36,10.74,-0.03,0.08,2.91,1.05,0,"1 nonsynonymous","Q163C",1
"lib1","SARS-CoV-2","TAAGACCTTTATCTCC",2,46.64,8.83,-1.94,0.17,1.65,1.13,0.01,">1 nonsynonymous","S45N F99Y N120L",3
"lib1","SARS-CoV-2","TAAGACGACCCGACGA",6,95.52,9.31,-1.46,0.11,2.18,1.15,0,">1 nonsynonymous","F99Y P169Y",2
"lib1","SARS-CoV-2","TAAGACGATAACCCTG",3,22.78,6.24,-4.52,0.55,1.5,1.1,0.02,">1 nonsynonymous","R16M S41F A105K",3
"lib1","SARS-CoV-2","TAAGACGATCCAATAA",9,20.27,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A22K D34V K94G A145G",4
"lib1","SARS-CoV-2","TAAGACGATCGCAGCA",2,38.59,10.71,-0.05,0.09,2.89,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAGACGCAGTAAGGT",1,27.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G74R K128N N157C",3
"lib1","SARS-CoV-2","TAAGACGTAATACATT",4,25.09,6.6,-4.16,0.35,1.87,1.13,0.01,">1 nonsynonymous","P7R K26S S41T F99L F126T",5
"lib1","SARS-CoV-2","TAAGACGTATAAGTAC",2,23.61,7.35,-3.41,0.27,1.5,1.01,0.02,">1 nonsynonymous","P96S Y119D R136A Y159S",4
"lib1","SARS-CoV-2","TAAGACGTGGCCGCAC",2,109.51,10.3,-0.47,0.05,2.8,1.04,0,">1 nonsynonymous","L60S Y91L",2
"lib1","SARS-CoV-2","TAAGACGTTAAACGAT",5,99.92,10.17,-0.59,0.04,2.89,1.01,0,">1 nonsynonymous","G9V S43C L122W",3
"lib1","SARS-CoV-2","TAAGACGTTAACCGAT",1,17.2,9.59,-1.18,0.1,2.81,1.09,0,">1 nonsynonymous","K87T F156K K199F",3
"lib1","SARS-CoV-2","TAAGACGTTGAAGTGT",6,37.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A A81L S164T",3
"lib1","SARS-CoV-2","TAAGACTAATTGTGGG",2,36.91,10.75,-0.02,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGACTACTTCTGCA",2,0.9,NA,NA,NA,NA,NA,NA,"stop","S147* P197F",2
"lib1","SARS-CoV-2","TAAGACTAGCTCCTAT",2,36.18,8.5,-2.27,0.1,2.87,1.11,0,"1 nonsynonymous","N157F",1
"lib1","SARS-CoV-2","TAAGACTATATCCTAC",5,73.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","R16S S36K C49I P82T T100Y Y121L",6
"lib1","SARS-CoV-2","TAAGACTCTAGCCGAA",1,35.48,10.3,-0.47,0.07,2.84,1.05,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","TAAGACTGCTACCTAT",3,38.36,10.63,-0.13,0.07,2.87,1.09,0,">1 nonsynonymous","L5V V37D",2
"lib1","SARS-CoV-2","TAAGACTGGCAAATAG",3,29.08,8.15,-2.61,0.19,1.8,1.16,0.01,">1 nonsynonymous","V65S P149I Q168L",3
"lib1","SARS-CoV-2","TAAGACTGGGGTACCA",5,19.43,6,-4.76,2,2.19,1.41,0.02,">1 nonsynonymous","C6L A14R W106G D137T T170Y",5
"lib1","SARS-CoV-2","TAAGACTGTGGGTTGA",2,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y I88L",2
"lib1","SARS-CoV-2","TAAGACTTAAAGGCAA",6,166.35,8.12,-2.64,0.3,1.5,1.08,0.03,"1 nonsynonymous","G101C",1
"lib1","SARS-CoV-2","TAAGACTTATATTCAT",4,49.66,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N58K G101I",2
"lib1","SARS-CoV-2","TAAGACTTCATAAATT",3,27.16,10.38,-0.38,0.08,2.88,1,0,">1 nonsynonymous","D59E Y91L A190I",3
"lib1","SARS-CoV-2","TAAGACTTGTAATATA",6,23.04,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","W23M N40T D59V T100S S113M T201S",6
"lib1","SARS-CoV-2","TAAGACTTTCTACTTC",3,0.92,NA,NA,NA,NA,NA,NA,"stop","T100P E135* R136Y",3
"lib1","SARS-CoV-2","TAAGAGAAACATACTA",2,39.64,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G74A L122Y F167G",3
"lib1","SARS-CoV-2","TAAGAGAAATGATGAC",7,157.39,9.55,-1.21,0.07,2.65,1.09,0,">1 nonsynonymous","S45L G174K",2
"lib1","SARS-CoV-2","TAAGAGAAGTCCAATA",2,21.07,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","I2F S43W K56I V103T K114V V173H",6
"lib1","SARS-CoV-2","TAAGAGAATGACATGA",3,13.31,10.5,-0.26,0.08,2.83,1.18,0,"1 nonsynonymous","P191I",1
"lib1","SARS-CoV-2","TAAGAGAATTTAATGA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","L5A V37Y S43* T63Q I142D G155C",6
"lib1","SARS-CoV-2","TAAGAGACAAGTGCCT",4,6.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54K Y93T F160H",3
"lib1","SARS-CoV-2","TAAGAGACAATATACC",15,118.38,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","G86M F99I",2
"lib1","SARS-CoV-2","TAAGAGAGGGGGAGGA",3,104.37,10.19,-0.58,0.05,2.81,1.05,0,">1 nonsynonymous","C61R N120I F160G",3
"lib1","SARS-CoV-2","TAAGAGAGTAATTGTA",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69W Q84E D90L",3
"lib1","SARS-CoV-2","TAAGAGATGCAGGTGC",3,8.01,8.45,-2.31,0.23,1.77,1.08,0.02,">1 nonsynonymous","G51V F134A",2
"lib1","SARS-CoV-2","TAAGAGATTCGAGGAA",1,3.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","TAAGAGCGAAAACATC",3,67.24,10.14,-0.62,0.04,2.71,1.05,0,">1 nonsynonymous","D90M A105T",2
"lib1","SARS-CoV-2","TAAGAGGAATGTTATG",3,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E G86I K94R P149Q S200G",5
"lib1","SARS-CoV-2","TAAGAGGCAACGTTCA",3,42.59,9.32,-1.44,0.07,2.93,1.08,0,">1 nonsynonymous","I2W L122T E154V G166T",4
"lib1","SARS-CoV-2","TAAGAGGCTGTTACGA",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M C61T",2
"lib1","SARS-CoV-2","TAAGAGGTTAATAAGG",1,16.88,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G74P G86R P169A",3
"lib1","SARS-CoV-2","TAAGAGTAACCCAGAC",5,9.53,NA,NA,NA,NA,NA,NA,"stop","T63F A81L R136* A145I",4
"lib1","SARS-CoV-2","TAAGAGTCAATAGGAG",7,60.09,9.47,-1.29,0.12,1.67,1.1,0.01,"1 nonsynonymous","W23V",1
"lib1","SARS-CoV-2","TAAGAGTCCAACCGTA",1,8.84,6,-4.76,2,1.5,1.26,0.08,">1 nonsynonymous","N13A V37E V77R A89V L122N",5
"lib1","SARS-CoV-2","TAAGAGTCCGTACTTA",1,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105E E154G Q168K",3
"lib1","SARS-CoV-2","TAAGAGTGAAAATTGT",4,3.19,NA,NA,NA,NA,NA,NA,"stop","N4V S41R Y93* V103M",4
"lib1","SARS-CoV-2","TAAGAGTGTTGGAATC",2,124.19,9.42,-1.35,0.12,2.1,1.09,0.01,">1 nonsynonymous","P149I F160S Y178L",3
"lib1","SARS-CoV-2","TAAGAGTTAGCCCGAT",1,5.58,10.6,-0.16,0.09,2.77,1.17,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGAGTTGACAGCGA",12,28.68,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","R124I D137L Y159I T170V",4
"lib1","SARS-CoV-2","TAAGATAAAACCTTGA",6,26.37,6.99,-3.78,0.29,1.5,1.17,0.01,">1 nonsynonymous","I72H F99Y I138M",3
"lib1","SARS-CoV-2","TAAGATAAAGAAAGTC",6,127.67,10.04,-0.72,0.05,2.86,1.01,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","TAAGATAAATAATCCA",6,73.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12V A105E K114C L131R",4
"lib1","SARS-CoV-2","TAAGATAAATTGCTGT",1,34.94,8.54,-2.22,0.23,1.58,1.2,0.02,">1 nonsynonymous","T3H G146L",2
"lib1","SARS-CoV-2","TAAGATAACGGTAACG",4,63.85,10.29,-0.47,0.06,2.92,1.04,0,"1 nonsynonymous","A81C",1
"lib1","SARS-CoV-2","TAAGATAATTAGGATA",6,162.01,10.63,-0.13,0.04,2.91,1.04,0,"1 nonsynonymous","A33S",1
"lib1","SARS-CoV-2","TAAGATAGACCAATCT",4,1.06,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib1","SARS-CoV-2","TAAGATAGATTTTGGA",7,37.07,8.66,-2.11,0.1,2.5,1.07,0,">1 nonsynonymous","A33T S129M Q168L",3
"lib1","SARS-CoV-2","TAAGATAGCCCACTGT",3,33.93,9.05,-1.72,0.09,2.77,1.1,0,"1 nonsynonymous","T170V",1
"lib1","SARS-CoV-2","TAAGATAGGTTAAGAA",2,5.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D N64S N118S G146R Q168S G174F",6
"lib1","SARS-CoV-2","TAAGATAGTCCCTTCA",8,11.55,10.24,-0.53,0.22,2.39,1.05,0.03,">1 nonsynonymous","Y35G N120M Y143K",3
"lib1","SARS-CoV-2","TAAGATAGTTCTCCGA",2,12.94,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13Y D90T Q176R",3
"lib1","SARS-CoV-2","TAAGATATAACAAATT",4,82.55,10.26,-0.51,0.03,2.9,1.02,0,">1 nonsynonymous","K26W K56S",2
"lib1","SARS-CoV-2","TAAGATATTCTACACT",6,52.59,6.69,-4.07,0.49,1.5,1.2,0.03,">1 nonsynonymous","F47Y G83Y D97H R136S",4
"lib1","SARS-CoV-2","TAAGATATTCTGATAA",2,44.1,10.18,-0.58,0.09,2.64,1.02,0,"1 nonsynonymous","F47H",1
"lib1","SARS-CoV-2","TAAGATCAACTGATTT",5,34.49,10.86,0.09,0.09,2.88,1.05,0,">1 nonsynonymous","Y39F L60Q",2
"lib1","SARS-CoV-2","TAAGATCACACAGAAA",9,5.37,NA,NA,NA,NA,NA,NA,"stop","K26N Y50M A89R N130*",4
"lib1","SARS-CoV-2","TAAGATCAGAAAGTCC",1,7.93,9.42,-1.35,0.39,2.38,1.34,0.07,">1 nonsynonymous","K87I Y121S G152R",3
"lib1","SARS-CoV-2","TAAGATCCACCAACGG",2,26.36,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","L95W S139H Y165P",3
"lib1","SARS-CoV-2","TAAGATCCTGTCTCGC",1,10.18,NA,NA,NA,NA,NA,0.23,"1 nonsynonymous","V181P",1
"lib1","SARS-CoV-2","TAAGATCGAAAAATTC",2,40.3,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T46A G51D C61L P82L G116Q L125C C158D",7
"lib1","SARS-CoV-2","TAAGATCTAGAAACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F44R G51V D59T D90T Y143* Q176E A190T",7
"lib1","SARS-CoV-2","TAAGATCTCTGAAATA",6,32.95,6.28,-4.48,0.69,1.5,1.2,0.02,">1 nonsynonymous","K87Y N107R Q144L",3
"lib1","SARS-CoV-2","TAAGATGACTCCACTT",3,33.95,9.92,-0.85,0.1,2.72,1.01,0,">1 nonsynonymous","F12Y R27K L60Y",3
"lib1","SARS-CoV-2","TAAGATGATACGATGG",3,49.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37N S43M Y50N F62R E141Q P149Q",6
"lib1","SARS-CoV-2","TAAGATGCTATTGACA",7,54.42,8.26,-2.51,0.26,1.5,1.18,0.03,">1 nonsynonymous","S45T R127L",2
"lib1","SARS-CoV-2","TAAGATGGAACTTAGA",8,91.32,10.78,0.02,0.08,2.94,1.04,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","TAAGATGGATCCATCT",7,5.44,NA,NA,NA,NA,NA,NA,"stop","T100* N109C",2
"lib1","SARS-CoV-2","TAAGATGGCTTTAAGG",1,6.2,8.09,-2.68,0.26,1.5,1.14,0.03,">1 nonsynonymous","G83V V115A G174V",3
"lib1","SARS-CoV-2","TAAGATGTAACATGAT",1,125.32,10.77,0,0.06,2.89,1.05,0,">1 nonsynonymous","N40T T46Y",2
"lib1","SARS-CoV-2","TAAGATGTGATTACCA",2,16.18,6,-4.76,2,3,1.17,0,">1 nonsynonymous","I28A C61V P96K R124D",4
"lib1","SARS-CoV-2","TAAGATGTTCCTTACC",6,140.46,10.76,0,0.06,2.92,1.04,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","TAAGATTAACTAAATC",2,93.71,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","F167G",1
"lib1","SARS-CoV-2","TAAGATTAAGATACCG",5,65.44,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L57E Y159G",2
"lib1","SARS-CoV-2","TAAGATTACAAATAGC",1,28.73,6.81,-3.96,0.41,1.5,1.24,0.03,">1 nonsynonymous","A145D Y178N S184A G196W",4
"lib1","SARS-CoV-2","TAAGATTAGCAACTTT",9,88.72,10.56,-0.21,0.05,2.95,1.02,0,">1 nonsynonymous","N58T A192T",2
"lib1","SARS-CoV-2","TAAGATTCCATCTATT",4,30.41,10.75,-0.01,0.1,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGATTCCGGGGTGG",4,53.04,9.9,-0.86,0.08,1.86,1.11,0,">1 nonsynonymous","S45G N107S P149D",3
"lib1","SARS-CoV-2","TAAGATTCTTTATACA",2,19.49,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S45P C158R Y175G K198N",4
"lib1","SARS-CoV-2","TAAGATTCTTTGTAAA",4,11.11,6,-4.76,0.84,2.27,1.05,0,">1 nonsynonymous","T3R C31Y N58F A81H E154I",5
"lib1","SARS-CoV-2","TAAGATTGCTAGAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y121* G166V",2
"lib1","SARS-CoV-2","TAAGATTGTTAACCTA",1,29.45,6.19,-4.57,0.78,1.5,1.1,0.02,">1 nonsynonymous","V11S Y178D",2
"lib1","SARS-CoV-2","TAAGATTTACAAACAT",5,45.14,8.94,-1.82,0.21,1.5,1.11,0.02,">1 nonsynonymous","L38P E141W",2
"lib1","SARS-CoV-2","TAAGATTTACCTTACA",5,46.19,7.98,-2.79,0.23,1.76,1.16,0.02,">1 nonsynonymous","Y39R V115E Y165C",3
"lib1","SARS-CoV-2","TAAGATTTCCTTATCA",1,22.31,10.72,-0.04,0.11,2.91,1.07,0.01,">1 nonsynonymous","S43M T148K",2
"lib1","SARS-CoV-2","TAAGCAAAAAACTGTT",4,0.54,NA,NA,NA,NA,NA,NA,"stop","G101A W106* K199F",3
"lib1","SARS-CoV-2","TAAGCAAAAAGGCTAC",2,38.61,9.18,-1.58,0.16,2.18,1.16,0.01,">1 nonsynonymous","N40P F62L P133W S139R N151K V173K",6
"lib1","SARS-CoV-2","TAAGCAAACCTAGAGA",9,53.58,6,-4.76,1.99,1.5,1.13,0.01,">1 nonsynonymous","N40A Q79V G116L F160C",4
"lib1","SARS-CoV-2","TAAGCAAATCTTGAGT",6,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90E N120I Q144K",3
"lib1","SARS-CoV-2","TAAGCAACAGAACTCA",2,44.75,8.65,-2.11,0.13,1.81,1.09,0.01,">1 nonsynonymous","R16D S45I C61P D90R",4
"lib1","SARS-CoV-2","TAAGCAAGAGACCTGC",3,63.19,10.81,0.05,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCAAGCCTTCGCG",2,113.83,10.74,-0.03,0.06,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCAAGTGGCCAAC",1,28.61,10.74,-0.02,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCAATTCCACCAA",1,7.59,7.8,-2.97,0.21,2.01,1.14,0,">1 nonsynonymous","F17Q F156T",2
"lib1","SARS-CoV-2","TAAGCACAAACCGATG",4,0.48,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib1","SARS-CoV-2","TAAGCACAAAGTTACT",3,122.06,7.98,-2.79,0.18,1.5,1.13,0.01,">1 nonsynonymous","R179Q K199S",2
"lib1","SARS-CoV-2","TAAGCACACGCACGAA",5,30.57,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18L F167A",2
"lib1","SARS-CoV-2","TAAGCACATAAACTGA",4,63.39,10.65,-0.11,0.05,2.94,1.04,0,">1 nonsynonymous","K48T T85S",2
"lib1","SARS-CoV-2","TAAGCACCACAGACAG",1,24.73,6.12,-4.65,1.51,1.5,1.17,0.08,">1 nonsynonymous","D59Q T85N C102Y T170S",4
"lib1","SARS-CoV-2","TAAGCACCAGCTTAGG",9,35.63,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y91N D97N V103F",3
"lib1","SARS-CoV-2","TAAGCACCCATAACAA",3,17.31,10.18,-0.59,0.12,2.08,1,0.01,"1 nonsynonymous","D34M",1
"lib1","SARS-CoV-2","TAAGCACGATTATAAA",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43C C49N T55S A105T",4
"lib1","SARS-CoV-2","TAAGCACGCAAAGTAT",7,12.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95R K114R A192C",3
"lib1","SARS-CoV-2","TAAGCACGTTGGTAAC",6,0.53,NA,NA,NA,NA,NA,NA,"stop","G9V L38I I104D T170* C195V",5
"lib1","SARS-CoV-2","TAAGCACTAAATGGGA",4,48.46,9.96,-0.81,0.13,2.06,1.1,0.01,">1 nonsynonymous","Y123V T140K G152T",3
"lib1","SARS-CoV-2","TAAGCACTAGTCTCAC",5,0.18,NA,NA,NA,NA,NA,NA,"stop","S29R K56W D112M N151* N157W G172Y",6
"lib1","SARS-CoV-2","TAAGCACTCAGAGCCG",6,25.72,6,-4.76,1.32,1.5,1.09,0.01,">1 nonsynonymous","D90I N107Y G146K G152D",4
"lib1","SARS-CoV-2","TAAGCACTGGGAATGC",5,1.58,NA,NA,NA,NA,NA,NA,"stop","L5W E10S Y50S Y66T V77G N92H L131*",7
"lib1","SARS-CoV-2","TAAGCAGGAAAAATCT",5,89.84,10.59,-0.17,0.05,2.91,1.05,0,"1 nonsynonymous","T140W",1
"lib1","SARS-CoV-2","TAAGCAGGAAACATAA",1,5.81,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G86E G166D V173G",3
"lib1","SARS-CoV-2","TAAGCAGTAACCCCAC",12,220.96,9.57,-1.19,0.09,2.55,1.07,0,">1 nonsynonymous","D59A Y91W V173H",3
"lib1","SARS-CoV-2","TAAGCAGTATTTTACT",1,0.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88C",1
"lib1","SARS-CoV-2","TAAGCAGTTAGATTAC",2,11.63,10.14,-0.63,0.1,2.94,1,0,">1 nonsynonymous","S29M C61W",2
"lib1","SARS-CoV-2","TAAGCAGTTAGTAAAA",1,73.59,10.18,-0.59,0.06,2.74,1.07,0,">1 nonsynonymous","S36I N64Y K132I",3
"lib1","SARS-CoV-2","TAAGCATAACTTATTA",3,27.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T Y35E N58V D112L R179A",5
"lib1","SARS-CoV-2","TAAGCATCGTTTCATT",3,15.27,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V103H N110I F160D C195D",4
"lib1","SARS-CoV-2","TAAGCATGATTCCACA",3,80.21,8.35,-2.41,0.16,2.05,1.09,0.01,">1 nonsynonymous","P54V Y123M P133A T148V Y175S",5
"lib1","SARS-CoV-2","TAAGCATGCCACTGTA",7,49.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F S19M L57D N92Y S113R",5
"lib1","SARS-CoV-2","TAAGCATGCGCCTTTA",5,11.62,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","S45F D97T V103K N130G S139Y",5
"lib1","SARS-CoV-2","TAAGCATGGAGTCCAG",5,48.51,6.12,-4.64,1.56,1.5,1.23,0.05,">1 nonsynonymous","K48L C102S N157I",3
"lib1","SARS-CoV-2","TAAGCATGGATATACC",2,1.07,NA,NA,NA,NA,NA,NA,"stop","S41R G51* P82F A105D G166A",5
"lib1","SARS-CoV-2","TAAGCATTAGAGCTAC",1,24.89,10.78,0.02,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCATTATCCAAGT",8,3.38,NA,NA,NA,NA,NA,NA,"stop","P82* D98F N120L N151H F185D",5
"lib1","SARS-CoV-2","TAAGCCAATACATCCA",3,26.2,6,-4.76,2,3,1.17,0,">1 nonsynonymous","E10H W106C P149H",3
"lib1","SARS-CoV-2","TAAGCCAATTCACCAA",2,55.93,10.02,-0.74,0.06,2.9,1.01,0,">1 nonsynonymous","L60T Q168M T201R",3
"lib1","SARS-CoV-2","TAAGCCAATTGTAGAT",4,28.72,6,-4.76,2,1.5,1.18,0.04,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","TAAGCCACCGAGCAAG",6,124.58,9.26,-1.5,0.08,2.75,1.13,0,">1 nonsynonymous","V37L A89S N118R P197N",4
"lib1","SARS-CoV-2","TAAGCCACTACGACGA",3,143.72,8.66,-2.1,0.1,2.85,1.1,0,">1 nonsynonymous","F126K F156R",2
"lib1","SARS-CoV-2","TAAGCCAGCGAGCCGA",3,21.64,6,-4.76,2,2.04,1.12,0.04,">1 nonsynonymous","V20S L60T R78T R127L",4
"lib1","SARS-CoV-2","TAAGCCAGTAAGACAC",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52Y D59N T140L",3
"lib1","SARS-CoV-2","TAAGCCAGTACGAAAT",2,25.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T63Q N92I S113A K128T V173W K199T",6
"lib1","SARS-CoV-2","TAAGCCATAAGACATA",9,116.28,10.72,-0.05,0.05,2.89,1.07,0,"1 nonsynonymous","E76D",1
"lib1","SARS-CoV-2","TAAGCCATAATCGCCT",1,20.28,10.54,-0.22,0.07,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCCATGACACCCA",2,8.87,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","L95E N107I E135Y",3
"lib1","SARS-CoV-2","TAAGCCCAGGATACAA",3,57.68,10.26,-0.51,0.06,2.87,1,0,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","TAAGCCCCCCAAAACT",2,33,8.62,-2.14,0.07,2.98,1.02,0,">1 nonsynonymous","V32M S129E Y143V G174M",4
"lib1","SARS-CoV-2","TAAGCCCCCCTTGTCA",7,90.55,9.74,-1.03,0.07,2.8,1.03,0,">1 nonsynonymous","T3R E10L G155D",3
"lib1","SARS-CoV-2","TAAGCCCCGGAAAAAC",1,44.41,9.94,-0.82,0.09,2.18,1.02,0,">1 nonsynonymous","F8I V37P S139V",3
"lib1","SARS-CoV-2","TAAGCCCGACATTAGG",2,7.33,7,-3.76,0.47,1.67,1.09,0.02,">1 nonsynonymous","N13K Y50L A81M F156G G174A",5
"lib1","SARS-CoV-2","TAAGCCCGTAATCTTC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","TAAGCCCTACCACGAA",3,70.46,9.98,-0.79,0.06,2.55,1.06,0,">1 nonsynonymous","D90G N151Q",2
"lib1","SARS-CoV-2","TAAGCCGACCCTGTTA",5,76.17,6,-4.76,0.92,1.5,1.17,0.01,">1 nonsynonymous","A105T N157P",2
"lib1","SARS-CoV-2","TAAGCCGATCTAACCA",4,36.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14R Y21R L38W P161S T170H T201R",6
"lib1","SARS-CoV-2","TAAGCCGCCGTAAGTT",1,56.19,9.95,-0.82,0.09,2.15,1.06,0,">1 nonsynonymous","Y35L S69E T201P",3
"lib1","SARS-CoV-2","TAAGCCGTATTACCTC",1,34.8,7.36,-3.4,0.36,1.5,1.06,0.04,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","TAAGCCGTATTAGAAG",5,64.09,10.61,-0.16,0.09,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCCTAAATGCCAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","P54R P96L A105* E154S",4
"lib1","SARS-CoV-2","TAAGCCTAATCAGGAG",4,42.56,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L38K Q84N L162T Q168F",4
"lib1","SARS-CoV-2","TAAGCCTAATTGACGA",6,0.05,NA,NA,NA,NA,NA,NA,"stop","T63Y A89* N110I T140F S200R",5
"lib1","SARS-CoV-2","TAAGCCTCTGACGTTG",7,13.64,6,-4.76,2,3,1.03,0,">1 nonsynonymous","Y50A A67Y N171C",3
"lib1","SARS-CoV-2","TAAGCCTGACAGGACG",3,0,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib1","SARS-CoV-2","TAAGCCTTCGGAGATC",4,0.61,NA,NA,NA,NA,NA,NA,"stop","Y39* T100F T201M",3
"lib1","SARS-CoV-2","TAAGCGAAATAGACCA",3,27.96,9.07,-1.69,0.12,1.85,1.04,0.01,">1 nonsynonymous","L60A E76H P161Q",3
"lib1","SARS-CoV-2","TAAGCGAACCACCTAG",2,92.19,10.29,-0.47,0.05,2.88,1.03,0,">1 nonsynonymous","L125F Q168R",2
"lib1","SARS-CoV-2","TAAGCGAAGACAGGGT",4,40.81,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35E A42L L60N G83F N107C I142Q",6
"lib1","SARS-CoV-2","TAAGCGAATCATATAG",4,50.1,9.76,-1,0.03,2.91,1.04,0,">1 nonsynonymous","R73S L162I",2
"lib1","SARS-CoV-2","TAAGCGACAATTAAAG",1,17.29,9.76,-1,0.12,2.58,1.05,0.01,">1 nonsynonymous","A14S F17L Y178H",3
"lib1","SARS-CoV-2","TAAGCGACCCCGCATC",8,82.09,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","K26T G101D L122S F156I L162V Q163K",6
"lib1","SARS-CoV-2","TAAGCGACGACCATAA",1,7.64,8.16,-2.61,0.3,1.71,1.03,0.04,">1 nonsynonymous","N92S Y119V Q168S",3
"lib1","SARS-CoV-2","TAAGCGAGGCTACATA",2,32.24,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V11W S45R N92K Y123C E141T",5
"lib1","SARS-CoV-2","TAAGCGATAATACAGA",7,220.27,10.24,-0.53,0.04,2.91,1,0,">1 nonsynonymous","T100F G155V",2
"lib1","SARS-CoV-2","TAAGCGATCTTATCAT",2,17.19,10.75,-0.01,0.05,2.98,1,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","TAAGCGATGACTCGTT",3,32.28,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V71H N110K",2
"lib1","SARS-CoV-2","TAAGCGATTTGAAAAT",1,7.08,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N92M L187C",2
"lib1","SARS-CoV-2","TAAGCGATTTTGGTCC",1,15.51,10.6,-0.16,0.13,2.87,1.14,0,"1 nonsynonymous","T46M",1
"lib1","SARS-CoV-2","TAAGCGCAGGTAATAA",3,16.44,7.77,-3,0.35,1.79,1.2,0.04,"1 nonsynonymous","W23L",1
"lib1","SARS-CoV-2","TAAGCGCTTTGAAGGC",1,3.46,NA,NA,NA,NA,NA,NA,"stop","G9K K94A K128* E141W",4
"lib1","SARS-CoV-2","TAAGCGGATGTTAAAG",1,36.64,7.09,-3.67,0.14,1.5,1.07,0,">1 nonsynonymous","A22H G117C P133S E154G N171Y",5
"lib1","SARS-CoV-2","TAAGCGGTTCCAACAC",6,64.94,10.74,-0.03,0.1,2.78,1.04,0,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","TAAGCGTAAACGTAAA",3,6.35,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","Y93A E141W G174W",3
"lib1","SARS-CoV-2","TAAGCGTCCGACATAT",1,52.49,10.66,-0.1,0.05,2.93,1.01,0,">1 nonsynonymous","D59T L95V",2
"lib1","SARS-CoV-2","TAAGCGTTCGAGACGC",8,21.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L S69Y D90T",3
"lib1","SARS-CoV-2","TAAGCTAAACAATTGT",9,91.1,10.86,0.09,0.06,2.94,1,0,"1 nonsynonymous","S200P",1
"lib1","SARS-CoV-2","TAAGCTAAATGGGTAA",2,0.46,NA,NA,NA,NA,NA,NA,"stop","P7* F44V Y121I A192Q",4
"lib1","SARS-CoV-2","TAAGCTAACCAAGACA",2,25.69,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","I80S Y119L",2
"lib1","SARS-CoV-2","TAAGCTAACTCGTCCA",3,44.63,9.36,-1.4,0.14,1.88,1.13,0.01,">1 nonsynonymous","D112V E154S",2
"lib1","SARS-CoV-2","TAAGCTAACTTTTTGA",4,45.89,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V52A T63N T148P F167S",4
"lib1","SARS-CoV-2","TAAGCTACACTCGCTG",2,13.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A42T I88G",2
"lib1","SARS-CoV-2","TAAGCTACTCGAATAC",3,81.66,10.7,-0.07,0.07,2.88,1.08,0,"1 nonsynonymous","P149T",1
"lib1","SARS-CoV-2","TAAGCTACTGATAAGA",3,0,NA,NA,NA,NA,NA,NA,"stop","T100I G196*",2
"lib1","SARS-CoV-2","TAAGCTATCCACTGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105F N157T",2
"lib1","SARS-CoV-2","TAAGCTATGCAAAACG",1,14.27,10.21,-0.56,0.14,2.43,1,0.01,">1 nonsynonymous","L5R Y93F",2
"lib1","SARS-CoV-2","TAAGCTATTCTCGCGA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R F70L D98F N120L Y143N",5
"lib1","SARS-CoV-2","TAAGCTCAAGGCTGCA",2,14.13,7.21,-3.56,0.56,1.5,1.08,0.08,">1 nonsynonymous","D90F L95Y G146R T201A",4
"lib1","SARS-CoV-2","TAAGCTCACTTCCTTA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","S41N Y91C G155*",3
"lib1","SARS-CoV-2","TAAGCTCCGTATCCAG",6,189.85,10.68,-0.08,0.05,2.94,1.02,0,">1 nonsynonymous","Y123S T201W",2
"lib1","SARS-CoV-2","TAAGCTCGCCTTTGAT",14,108.55,9.78,-0.98,0.07,2.42,1.04,0,"1 nonsynonymous","V20S",1
"lib1","SARS-CoV-2","TAAGCTGATAAAGTCA",2,22.88,10.66,-0.11,0.15,2.86,1.02,0.01,">1 nonsynonymous","S19A Q168W T201V",3
"lib1","SARS-CoV-2","TAAGCTGGAATGGTTA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","C61P I88* N120Y P161A K198L",5
"lib1","SARS-CoV-2","TAAGCTGGATATAGAG",3,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V I142S",2
"lib1","SARS-CoV-2","TAAGCTTAATCAAAAT",5,25.88,10.87,0.11,0.16,2.86,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAAGCTTATTCATTGG",4,0.87,NA,NA,NA,NA,NA,NA,"stop","E141T G174*",2
"lib1","SARS-CoV-2","TAAGCTTCATTAATAG",8,148.71,10.69,-0.08,0.05,2.89,1.04,0,">1 nonsynonymous","A33T T55S",2
"lib1","SARS-CoV-2","TAAGCTTTCAACGGAA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","C6* W106S Q144G",3
"lib1","SARS-CoV-2","TAAGGAAAAAAAATTA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","V11R C49M L60* A89G S139V G196A",6
"lib1","SARS-CoV-2","TAAGGAAAGAAAAGCA",1,3.21,NA,NA,NA,NA,NA,NA,"stop","G9* V37K L125V Q144C T201N",5
"lib1","SARS-CoV-2","TAAGGAACACCCCAAA",2,12.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D68L Y121L G152R",3
"lib1","SARS-CoV-2","TAAGGAACGCCAAATA",9,82.44,10.1,-0.66,0.07,2.68,1,0,">1 nonsynonymous","S29L S129V T140C",3
"lib1","SARS-CoV-2","TAAGGAACGCCCAGTG",10,181.28,10.79,0.02,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGAACGCCGTCTG",2,27.05,9.25,-1.51,0.08,2.75,1.13,0,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","TAAGGAATACTCTGTA",5,59.67,10.64,-0.13,0.05,2.9,1.03,0,">1 nonsynonymous","S36M N64F",2
"lib1","SARS-CoV-2","TAAGGAATAGTCTGAA",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L162P S184D",2
"lib1","SARS-CoV-2","TAAGGAATCATTATCT",2,70.34,10.11,-0.66,0.09,2.05,1.02,0,">1 nonsynonymous","L5F N13V",2
"lib1","SARS-CoV-2","TAAGGACATTAGTTCA",1,10.37,10.08,-0.69,0.25,2.05,1.15,0.03,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","TAAGGACCTGCAAATA",1,8.4,6.06,-4.7,0.12,2.67,1,0,">1 nonsynonymous","I2G R16G R27T T85V D112S I138W S200N",7
"lib1","SARS-CoV-2","TAAGGACTCAGTAAAC",13,302.05,10.83,0.07,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGAGAAATACATT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T55* F62T A81Y C158I",4
"lib1","SARS-CoV-2","TAAGGAGAATAAATTA",7,47.58,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89I K132N S139Y",3
"lib1","SARS-CoV-2","TAAGGAGATCTTTTCA",8,102.27,10.24,-0.52,0.05,2.9,1,0,"1 nonsynonymous","C31N",1
"lib1","SARS-CoV-2","TAAGGAGCATTACTTG",1,62.41,10.74,-0.02,0.07,2.91,1.06,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TAAGGAGCCATAGAGA",1,1.06,NA,NA,NA,NA,NA,NA,"stop","A81* K128L",2
"lib1","SARS-CoV-2","TAAGGAGCGAGGTCAA",1,113.71,10.03,-0.74,0.07,2.6,1.02,0,">1 nonsynonymous","N4L S129L",2
"lib1","SARS-CoV-2","TAAGGAGTATACATTA",4,69.9,9.81,-0.95,0.09,2.4,1.08,0,">1 nonsynonymous","L60Q N120R P133T",3
"lib1","SARS-CoV-2","TAAGGATAATTCACTA",1,2.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGATACCCAAGAA",4,180.74,10.78,0.02,0.06,2.89,1.03,0,">1 nonsynonymous","D90N Q163T K198L",3
"lib1","SARS-CoV-2","TAAGGATACCTTGAAC",3,79.71,10.66,-0.11,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGATAGAAGTCCT",1,24.65,10.72,-0.05,0.05,2.77,1.1,0,">1 nonsynonymous","A81S L122M G152A",3
"lib1","SARS-CoV-2","TAAGGATCCACACTCT",12,138.26,10.33,-0.43,0.04,2.85,1.02,0,">1 nonsynonymous","Y91N T148E V173W",3
"lib1","SARS-CoV-2","TAAGGATGAAACCGAC",7,88.07,6.14,-4.63,0.46,1.5,1.13,0.01,">1 nonsynonymous","S36V N120E L131S I138R",4
"lib1","SARS-CoV-2","TAAGGATTGATGCGTA",5,93.46,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K48W T85L N107L N118P H189I",5
"lib1","SARS-CoV-2","TAAGGCAAGTTTGTTC",1,35.28,10.1,-0.66,0.13,2.68,1.05,0.01,">1 nonsynonymous","I104V Y143L P197A",3
"lib1","SARS-CoV-2","TAAGGCACGAGAATTC",1,1.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59L",1
"lib1","SARS-CoV-2","TAAGGCACTAAAAAAA",11,129.26,9.69,-1.07,0.09,1.85,1.09,0,">1 nonsynonymous","V11A K56T T100Q",3
"lib1","SARS-CoV-2","TAAGGCACTACAAACC",1,25.29,6.91,-3.85,0.64,1.5,1.21,0.05,">1 nonsynonymous","F12G A105Y",2
"lib1","SARS-CoV-2","TAAGGCAGATGTCATG",7,3007.69,9.61,-1.15,0.08,1.86,1.06,0,"1 nonsynonymous","A89R",1
"lib1","SARS-CoV-2","TAAGGCAGCCACCTAC",5,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87W N157F",2
"lib1","SARS-CoV-2","TAAGGCATAGAAGGCC",12,2.2,NA,NA,NA,NA,NA,NA,"stop","Y50W P82L K132*",3
"lib1","SARS-CoV-2","TAAGGCATGCGATCAA",1,28.89,10.02,-0.74,0.1,2.71,1,0,">1 nonsynonymous","T15P N110W P149I",3
"lib1","SARS-CoV-2","TAAGGCATTAGGCGAA",2,0.86,NA,NA,NA,NA,NA,NA,"stop","C49* E135M S184F",3
"lib1","SARS-CoV-2","TAAGGCCATGGATCAC",1,10.85,8.53,-2.23,0.26,2.17,1.12,0.02,">1 nonsynonymous","N107K T170Y",2
"lib1","SARS-CoV-2","TAAGGCCCACTGACAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y91V P161*",2
"lib1","SARS-CoV-2","TAAGGCCCTAGACAGT",4,5.7,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3S Y50R D75S V103N",4
"lib1","SARS-CoV-2","TAAGGCCGAAGTGAGG",2,21.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10S W23M A89T R124N A145V",5
"lib1","SARS-CoV-2","TAAGGCCGTCAAGTAA",7,90.57,10.55,-0.21,0.04,2.85,1.03,0,">1 nonsynonymous","T85W V115S L122K Q144K",4
"lib1","SARS-CoV-2","TAAGGCCTACGCCTAT",3,19.73,7.19,-3.58,0.39,1.5,1.31,0.05,">1 nonsynonymous","N13R Y35E F62D F160A",4
"lib1","SARS-CoV-2","TAAGGCGCTAGGCGAT",4,23.69,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","K94N I104N D112G R124I G174A",5
"lib1","SARS-CoV-2","TAAGGCGTAAACTCAG",6,63.6,10.27,-0.49,0.08,2.85,1.04,0,">1 nonsynonymous","P7L S19P T148K",3
"lib1","SARS-CoV-2","TAAGGCGTGGGAAAGG",2,43.05,9.12,-1.65,0.18,1.94,1.14,0.01,">1 nonsynonymous","D59N I88V G155L",3
"lib1","SARS-CoV-2","TAAGGCTAACTGAGAT",1,29.31,10.11,-0.66,0.08,2.8,1.04,0,">1 nonsynonymous","I2L S45F",2
"lib1","SARS-CoV-2","TAAGGCTCGCGACATT",9,141.1,10.76,-0.01,0.06,2.95,1.01,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","TAAGGCTGCAAGACGA",5,25.97,6,-4.76,1.73,3,1.16,0,">1 nonsynonymous","R16H A105P S113R",3
"lib1","SARS-CoV-2","TAAGGCTGTTTGCAAA",6,99.96,10.18,-0.58,0.05,2.95,1.02,0,">1 nonsynonymous","S36D C61R Y143F G174L",4
"lib1","SARS-CoV-2","TAAGGGAAATCTCCCG",5,26.65,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T55S G101R W106E A145R Y165A T170M",6
"lib1","SARS-CoV-2","TAAGGGAAATGGGCAT",1,7.72,8.3,-2.46,0.2,1.66,1.17,0.02,">1 nonsynonymous","D59G S69K",2
"lib1","SARS-CoV-2","TAAGGGAACATGGCCC",10,104.7,6.25,-4.52,0.68,1.5,1.28,0.03,">1 nonsynonymous","L60P G86Y T201A",3
"lib1","SARS-CoV-2","TAAGGGACTAGTTACT",4,33.31,10.72,-0.04,0.03,2.97,1.01,0,">1 nonsynonymous","F44L S147D",2
"lib1","SARS-CoV-2","TAAGGGAGTTGACTCA",2,34.61,7.39,-3.38,0.34,1.5,1.14,0.03,">1 nonsynonymous","I2L Y35V G86A D97V",4
"lib1","SARS-CoV-2","TAAGGGATGTATCAGC",10,3622.95,9.77,-1,0.08,1.92,1.05,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","TAAGGGATTGAATATT",6,34.12,9.78,-0.98,0.2,2.26,1.1,0.01,">1 nonsynonymous","I104Y N120F S139R S184A",4
"lib1","SARS-CoV-2","TAAGGGCAATAGTAAA",4,35.81,6.92,-3.85,0.38,1.5,1.12,0.03,">1 nonsynonymous","S19L T63V",2
"lib1","SARS-CoV-2","TAAGGGCCTTGTAATC",6,12.78,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33N W106C R127N",3
"lib1","SARS-CoV-2","TAAGGGCGTATAAGGT",7,39.93,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","S36M C61A R78L C102P Y178F",5
"lib1","SARS-CoV-2","TAAGGGCTTATCTAAA",3,57.45,10.55,-0.22,0.09,2.68,1.12,0,">1 nonsynonymous","R27T G152Y",2
"lib1","SARS-CoV-2","TAAGGGGACCGATGAA",3,29.45,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9T V77S I138G",3
"lib1","SARS-CoV-2","TAAGGGGGGGACGTGA",4,23.99,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","S36V K48H G117T L125W G146E",5
"lib1","SARS-CoV-2","TAAGGGGTAAAAACTT",1,10.04,10.68,-0.08,0.09,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGGGTCCTATGTA",13,6.51,NA,NA,NA,NA,NA,NA,"stop","C6T N13Y Y21* S45R G51L R124Q V153A A190S",8
"lib1","SARS-CoV-2","TAAGGGTAACAGCTAA",13,3.29,NA,NA,NA,NA,NA,NA,"stop","N40D N58I L95* N107Y F160C Q168L T201N",7
"lib1","SARS-CoV-2","TAAGGGTACGAGACAA",8,116.75,10.66,-0.11,0.04,2.9,1.05,0,"1 nonsynonymous","I88V",1
"lib1","SARS-CoV-2","TAAGGGTAGGTGACCC",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119K K128V",2
"lib1","SARS-CoV-2","TAAGGGTGTATCGACT",2,9.38,7.4,-3.36,0.38,1.52,1.18,0.05,">1 nonsynonymous","Y121S S129R F134S",3
"lib1","SARS-CoV-2","TAAGGGTTGTGGGAAA",6,97.97,10.58,-0.19,0.05,2.91,1.05,0,">1 nonsynonymous","D98T K114R T148A",3
"lib1","SARS-CoV-2","TAAGGTAAATACAACA",2,113.77,10.31,-0.46,0.04,2.87,1.02,0,">1 nonsynonymous","S36N E135N",2
"lib1","SARS-CoV-2","TAAGGTAAGAAGAACT",5,20.26,6.37,-4.39,0.21,2.2,1.05,0,">1 nonsynonymous","T100P I138W Q168G",3
"lib1","SARS-CoV-2","TAAGGTAATGTCGACG",1,19.85,10.85,0.09,0.09,2.92,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGGTACAACTCTTA",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L G117T L131W",3
"lib1","SARS-CoV-2","TAAGGTACACTAAGTT",5,0.38,NA,NA,NA,NA,NA,NA,"stop","N107* S129L",2
"lib1","SARS-CoV-2","TAAGGTACGACACTCA",5,10.15,10.1,-0.66,0.16,2.59,1.03,0.02,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TAAGGTAGTGACTTGT",2,9.22,6.37,-4.4,0.74,1.5,1.12,0.05,">1 nonsynonymous","K48W L95F N110K",3
"lib1","SARS-CoV-2","TAAGGTATAATGAGTG",5,63.01,10.77,0.01,0.06,2.93,1.05,0,">1 nonsynonymous","S139T T201V",2
"lib1","SARS-CoV-2","TAAGGTATAATTACCT",2,29.04,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9C N40C G51R A105E Y119V",5
"lib1","SARS-CoV-2","TAAGGTATGAGCGCGG",6,72.87,9.07,-1.69,0.18,1.71,1.16,0.01,">1 nonsynonymous","C6S C61P A81T",3
"lib1","SARS-CoV-2","TAAGGTCAAAATTCAC",2,54.72,10.74,-0.03,0.08,2.87,1.06,0,"1 nonsynonymous","L60F",1
"lib1","SARS-CoV-2","TAAGGTCACCTACGAG",3,102.29,6.24,-4.52,0.53,1.5,1.14,0.01,">1 nonsynonymous","N4D N92T",2
"lib1","SARS-CoV-2","TAAGGTCCAAAAATCT",7,130.9,10.29,-0.48,0.04,2.82,1,0,">1 nonsynonymous","A42C F185L",2
"lib1","SARS-CoV-2","TAAGGTCGATACTCTA",3,51.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179F",1
"lib1","SARS-CoV-2","TAAGGTCGGCCCAACA",6,113.92,10.61,-0.16,0.04,2.9,1.04,0,">1 nonsynonymous","D59W S200R",2
"lib1","SARS-CoV-2","TAAGGTCGTAGACAAT",2,19.32,6.88,-3.89,0.43,1.5,1.12,0.04,">1 nonsynonymous","S45Q S108T C158F T170L L188N",5
"lib1","SARS-CoV-2","TAAGGTCGTATAACGG",1,108.46,9.77,-0.99,0.05,2.88,1.04,0,">1 nonsynonymous","L5Y Q84S F126W A190T",4
"lib1","SARS-CoV-2","TAAGGTCTTCCAAAAC",3,16.76,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","F17E K56Q T85P I104N T140W A190R",6
"lib1","SARS-CoV-2","TAAGGTGCAAAGATTA",1,67.56,10.41,-0.36,0.06,2.99,1,0,">1 nonsynonymous","E10H L188D K198V",3
"lib1","SARS-CoV-2","TAAGGTGCATATAATG",2,13.62,7.05,-3.72,0.43,1.5,1.26,0.04,">1 nonsynonymous","I28R S41K T148C",3
"lib1","SARS-CoV-2","TAAGGTGCCATTACTT",2,95.09,8.64,-2.12,0.09,2.99,1.04,0,">1 nonsynonymous","N24E Q168K",2
"lib1","SARS-CoV-2","TAAGGTGCCTAGCAGT",7,69.01,7.64,-3.13,0.3,1.5,1.03,0.02,">1 nonsynonymous","K26T Q84F D98S A105F",4
"lib1","SARS-CoV-2","TAAGGTTAGTGAGCAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N64I K114* N120F T201S",4
"lib1","SARS-CoV-2","TAAGGTTATTTGAATT",19,9.07,NA,NA,NA,NA,NA,NA,"stop","V115K R127* P177F",3
"lib1","SARS-CoV-2","TAAGGTTCTCATGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35Q G101Y C150K A190Y K198* T201D",6
"lib1","SARS-CoV-2","TAAGGTTGACTAAGGG",6,94.18,10.62,-0.15,0.04,2.9,1.03,0,">1 nonsynonymous","N58R D97M",2
"lib1","SARS-CoV-2","TAAGGTTTCCTGCGAT",2,26.98,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","A81I I88V N107R Y123W",4
"lib1","SARS-CoV-2","TAAGGTTTGACTGAGC",4,25.2,NA,NA,NA,NA,NA,NA,"stop","F12* R73T I88V D97V Y123S",5
"lib1","SARS-CoV-2","TAAGTAAAAAGAACCT",1,5.25,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15R G83I A89N Y121K",4
"lib1","SARS-CoV-2","TAAGTAAAAATAGAGA",8,80.66,10.46,-0.3,0.05,2.9,1,0,"1 nonsynonymous","A14C",1
"lib1","SARS-CoV-2","TAAGTAAAACATTACG",2,25.39,10.27,-0.5,0.07,2.77,1.03,0,">1 nonsynonymous","G9C D59Y",2
"lib1","SARS-CoV-2","TAAGTAAAAGTCTGTA",6,0.34,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","TAAGTAAAATAAAAGG",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E L57F P96M E141D K198Y",5
"lib1","SARS-CoV-2","TAAGTAAAATTAAACT",3,62.1,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61N L95I G146I Y175T",4
"lib1","SARS-CoV-2","TAAGTAAACCATCCTT",2,17.87,10.03,-0.73,0.13,2.57,1.06,0.01,">1 nonsynonymous","C6R C61I L122M",3
"lib1","SARS-CoV-2","TAAGTAAACTGCCGAT",7,126.06,8.87,-1.89,0.21,1.5,1.02,0.02,">1 nonsynonymous","I28G F62S",2
"lib1","SARS-CoV-2","TAAGTAAATCATTGGT",2,37.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81I N107Y P149I P161L V173F",5
"lib1","SARS-CoV-2","TAAGTAACATTTTGCA",5,42.55,9.82,-0.94,0.07,2.81,1,0,">1 nonsynonymous","T55V N107R T201K",3
"lib1","SARS-CoV-2","TAAGTAACCATATAAC",4,43.34,6.03,-4.73,1.04,1.5,1.16,0.03,">1 nonsynonymous","G9K C61Y K94L Q168V",4
"lib1","SARS-CoV-2","TAAGTAACGTGACTTG",2,18.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86R P133R Y175K",3
"lib1","SARS-CoV-2","TAAGTAACTAGTCGAA",3,10.61,6.47,-4.29,0.7,1.5,1.12,0.02,">1 nonsynonymous","W23G F185S",2
"lib1","SARS-CoV-2","TAAGTAACTATATATA",2,108.87,8.78,-1.98,0.06,2.61,1.12,0,">1 nonsynonymous","P54T Q176S",2
"lib1","SARS-CoV-2","TAAGTAAGCGCGGTTC",2,6.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12N P82R V103R",3
"lib1","SARS-CoV-2","TAAGTAAGTACCAAGG",8,206.25,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36W V65C I138A G152S G172K",5
"lib1","SARS-CoV-2","TAAGTAATAAGCTGAA",1,17.37,7.94,-2.83,0.3,1.5,1.01,0.03,">1 nonsynonymous","G83E Y119R P133T",3
"lib1","SARS-CoV-2","TAAGTAATAATAACCA",5,85.97,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","R27A Y39V N157M Y165H",4
"lib1","SARS-CoV-2","TAAGTAATAGCGACTT",2,77.57,7.22,-3.55,0.29,1.5,1.08,0.03,">1 nonsynonymous","C158I T201R",2
"lib1","SARS-CoV-2","TAAGTAATATGTAGGC",8,143.25,10.56,-0.2,0.07,2.84,1.08,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","TAAGTAATCACCGCAG",6,49.82,6,-4.76,1.25,1.5,1.21,0.03,">1 nonsynonymous","G9R S19R G51S",3
"lib1","SARS-CoV-2","TAAGTAATGAAGGAAA",5,32.9,10.03,-0.73,0.06,2.71,1.06,0,">1 nonsynonymous","N24V F62I F134L",3
"lib1","SARS-CoV-2","TAAGTAATTAGCCTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50E K56* F167A V173L C195G",5
"lib1","SARS-CoV-2","TAAGTACAAACAGCTA",2,67.15,10.62,-0.15,0.03,2.97,1.03,0,">1 nonsynonymous","V11L F160N",2
"lib1","SARS-CoV-2","TAAGTACACTACAGAT",1,13.8,6.89,-3.87,0.5,1.5,1.02,0.06,">1 nonsynonymous","V103S C158L",2
"lib1","SARS-CoV-2","TAAGTACACTACTGAG",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q S36Y S41L D90V T201L",5
"lib1","SARS-CoV-2","TAAGTACAGCTTGAGG",3,30.83,10.07,-0.69,0.08,2.74,1.1,0,">1 nonsynonymous","R27I D98W N151W",3
"lib1","SARS-CoV-2","TAAGTACATCATCCTA",11,136.97,10.8,0.04,0.09,2.88,1.07,0,"1 nonsynonymous","L60M",1
"lib1","SARS-CoV-2","TAAGTACATTAGCTTC",1,7.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8D Q84K I104N D112T",4
"lib1","SARS-CoV-2","TAAGTACCACACTACT",6,34.12,6.11,-4.65,0.86,1.5,1.11,0.02,">1 nonsynonymous","F17C N92F E141F",3
"lib1","SARS-CoV-2","TAAGTACGCCAGACTT",2,5.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D E10G V11F C31P V37M D59G F99H V194L",8
"lib1","SARS-CoV-2","TAAGTACGCTGAGTCA",6,54.33,10.5,-0.27,0.04,2.94,1.04,0,">1 nonsynonymous","S43D R136H",2
"lib1","SARS-CoV-2","TAAGTAGAAACTGAAT",3,12.38,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","F12G C49L L122W",3
"lib1","SARS-CoV-2","TAAGTAGACAAGTTAG",5,53.63,10.84,0.07,0.1,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGTAGGCTCGTCCC",1,23.39,10.73,-0.04,0.08,2.97,1,0,"1 nonsynonymous","N1A",1
"lib1","SARS-CoV-2","TAAGTAGTTCTTAAAT",6,98.76,10.27,-0.5,0.04,2.93,1.01,0,">1 nonsynonymous","N1R G9S C61R G155M",4
"lib1","SARS-CoV-2","TAAGTAGTTTGCACGT",3,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M R27A D137L",3
"lib1","SARS-CoV-2","TAAGTATAAACGACAA",6,91.32,9.69,-1.07,0.09,1.99,1.07,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TAAGTATAACAAGCAG",4,46.38,7.57,-3.2,0.22,1.5,1.13,0.01,">1 nonsynonymous","A33Q P96V",2
"lib1","SARS-CoV-2","TAAGTATAAGGACAAG",5,0.18,NA,NA,NA,NA,NA,NA,"stop","A14V F44P C61G V103* S139A N157Y",6
"lib1","SARS-CoV-2","TAAGTATACTATGAAG",2,23.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50S A145D",2
"lib1","SARS-CoV-2","TAAGTATAGACAGTGA",5,12.62,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Y50V V71S Y119P",3
"lib1","SARS-CoV-2","TAAGTATATCAACTAT",2,29.49,10.61,-0.15,0.08,2.89,1.07,0,"1 nonsynonymous","C61W",1
"lib1","SARS-CoV-2","TAAGTATCGACAACCA",4,34.18,9.94,-0.82,0.13,2.65,1.05,0.01,"1 nonsynonymous","L57R",1
"lib1","SARS-CoV-2","TAAGTATGAAACCTAC",4,107.69,10.21,-0.56,0.06,2.74,1,0,">1 nonsynonymous","A14K D98S Y123S T201N",4
"lib1","SARS-CoV-2","TAAGTATGCAAAGCAA",1,17.67,6,-4.76,2,3,1.09,0,">1 nonsynonymous","C6W W23S",2
"lib1","SARS-CoV-2","TAAGTATGTAACAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3F V32* K87D S139T F167L",5
"lib1","SARS-CoV-2","TAAGTATTAGGTTAAG",11,1.95,NA,NA,NA,NA,NA,NA,"stop","F62*",1
"lib1","SARS-CoV-2","TAAGTATTATTAATGC",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R N120P N151I",3
"lib1","SARS-CoV-2","TAAGTATTTTGTCCAG",1,15.61,10.2,-0.56,0.19,2.54,1.03,0.01,">1 nonsynonymous","Y91R N110S",2
"lib1","SARS-CoV-2","TAAGTCAAAAGCAGAG",4,100.55,10.67,-0.09,0.05,2.91,1.06,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","TAAGTCAAACAAGGCC",2,12.96,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","N40T L60V V77A T85S Y121S D137H G174L L187Y",8
"lib1","SARS-CoV-2","TAAGTCAAAGGGACGT",3,49,10.56,-0.21,0.05,2.89,1,0,">1 nonsynonymous","S53M D59G",2
"lib1","SARS-CoV-2","TAAGTCAAATAATAAA",13,257.73,10.47,-0.29,0.04,2.88,1.02,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","TAAGTCAACTGGCCCT",4,66,8.62,-2.14,0.09,2.37,1.09,0,">1 nonsynonymous","W106Y N120M F156G",3
"lib1","SARS-CoV-2","TAAGTCAGAGAGAGGA",2,16.86,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","C49L C158A Y165F N171T",4
"lib1","SARS-CoV-2","TAAGTCAGGCTCACCA",3,82.92,6,-4.76,2,1.97,1.2,0.01,">1 nonsynonymous","G9W T55S G172L T201L",4
"lib1","SARS-CoV-2","TAAGTCAGTATACGCA",2,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112K I142E E154W",3
"lib1","SARS-CoV-2","TAAGTCATAAAAACGG",2,42.3,10.24,-0.53,0.08,2.76,1,0,"1 nonsynonymous","I104H",1
"lib1","SARS-CoV-2","TAAGTCATAATTAACA",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R Q144F R179I",3
"lib1","SARS-CoV-2","TAAGTCATATCGACTT",8,157.17,10.45,-0.32,0.11,2.73,1.04,0,">1 nonsynonymous","R16N Y35S",2
"lib1","SARS-CoV-2","TAAGTCATATGTCACA",5,353.9,10.51,-0.26,0.03,2.89,1.01,0,"1 nonsynonymous","A22G",1
"lib1","SARS-CoV-2","TAAGTCCATATGCGAC",6,16.99,6.65,-4.11,0.36,1.5,1.09,0.02,">1 nonsynonymous","S41Q R127M R136N",3
"lib1","SARS-CoV-2","TAAGTCCCAACGTATT",1,0.68,NA,NA,NA,NA,NA,NA,"stop","P7L N13S E141* H189N",4
"lib1","SARS-CoV-2","TAAGTCCGAATAAACG",5,110.77,10.1,-0.67,0.04,2.97,1,0,">1 nonsynonymous","K87L V115H E141Y",3
"lib1","SARS-CoV-2","TAAGTCCGACTGGATA",2,42.44,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","K87N D90Y R124L T170Y Q176H",5
"lib1","SARS-CoV-2","TAAGTCCGGACCTGAA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V N107C Q144Y",3
"lib1","SARS-CoV-2","TAAGTCCTTATTCTAG",6,1.6,NA,NA,NA,NA,NA,NA,"stop","A89K S129R E141S Q163*",4
"lib1","SARS-CoV-2","TAAGTCGAAATTTGTC",3,90.45,9.01,-1.75,0.1,2.58,1.12,0,">1 nonsynonymous","I104F N107L",2
"lib1","SARS-CoV-2","TAAGTCGAATTAAAAC",3,33.55,10.81,0.04,0.08,2.93,1.04,0,">1 nonsynonymous","L122S V153I",2
"lib1","SARS-CoV-2","TAAGTCGATTGGGATA",6,1.66,NA,NA,NA,NA,NA,NA,"stop","Q84N V115Q A145*",3
"lib1","SARS-CoV-2","TAAGTCGGGAAAACTG",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V T15Y I72T S184V",4
"lib1","SARS-CoV-2","TAAGTCTAAGACGACA",3,36.68,10.86,0.09,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGTCTACAATAGAC",2,35.22,9.63,-1.14,0.09,2.73,1.17,0,">1 nonsynonymous","V37A Y91V G174D",3
"lib1","SARS-CoV-2","TAAGTCTACCTTGTGA",3,22.21,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","S184P",1
"lib1","SARS-CoV-2","TAAGTCTCTAAGCTAC",2,381.47,8.33,-2.44,0.37,1.5,1,0.05,">1 nonsynonymous","F8S R16D G86N K94G T148M",5
"lib1","SARS-CoV-2","TAAGTCTGATATTTAA",8,132.58,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17G N30L T85K W106K I142Y",5
"lib1","SARS-CoV-2","TAAGTCTGATTGACAA",1,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99N N107H E141W",3
"lib1","SARS-CoV-2","TAAGTCTTAGATACAG",6,23.9,10.08,-0.69,0.1,2.8,1.02,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TAAGTCTTGGCAGACA",2,39.4,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G116V R124Y",2
"lib1","SARS-CoV-2","TAAGTCTTTCTCCTTA",2,37.7,9.54,-1.22,0.09,1.96,1.09,0,">1 nonsynonymous","N4R F70Y",2
"lib1","SARS-CoV-2","TAAGTGAAAAAGGTGT",5,78.05,NA,NA,NA,NA,NA,NA,"stop","D98* V180Y P197A",3
"lib1","SARS-CoV-2","TAAGTGAAAATGTCTA",3,10.5,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","Y93P L162M",2
"lib1","SARS-CoV-2","TAAGTGAAGCCAACTC",6,0.78,NA,NA,NA,NA,NA,NA,"stop","L5* V20L",2
"lib1","SARS-CoV-2","TAAGTGACACGAACGG",7,150.91,10.74,-0.03,0.06,2.86,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAAGTGACACTAGATA",4,22.51,10.69,-0.07,0.09,2.96,1,0,"1 nonsynonymous","K48C",1
"lib1","SARS-CoV-2","TAAGTGACATTCACTG",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N P82A K114Y P149S",4
"lib1","SARS-CoV-2","TAAGTGACGTCCGTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15K S19F S41* P96V",4
"lib1","SARS-CoV-2","TAAGTGACTTATCTCA",1,1.22,NA,NA,NA,NA,NA,NA,"stop","V11L C49*",2
"lib1","SARS-CoV-2","TAAGTGAGAATGTGAG",1,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","TAAGTGAGCAAAGACA",5,31.67,10.72,-0.05,0.11,2.9,1.05,0.01,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","TAAGTGAGGAGGTGAG",2,9.81,6.66,-4.1,0.43,1.62,1.18,0.04,"1 nonsynonymous","D137P",1
"lib1","SARS-CoV-2","TAAGTGATGCCGAGCC",2,80.37,10.77,0.01,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGTGATGCCGCATA",3,19.54,10.05,-0.71,0.12,2.01,1.02,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","TAAGTGCAAACTGCTG",3,8.74,10.61,-0.15,0.15,2.79,1.15,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAAGTGCCACGAGGAT",7,129.9,10.71,-0.05,0.05,2.95,1.02,0,">1 nonsynonymous","N4E N120L",2
"lib1","SARS-CoV-2","TAAGTGCCAGTGGATT",3,41.14,8.41,-2.35,0.28,1.5,1,0.03,"1 nonsynonymous","D68V",1
"lib1","SARS-CoV-2","TAAGTGCCATAACGAG",1,17.46,10.74,-0.03,0.05,2.91,1.06,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","TAAGTGCCCAAAAGCT",2,9.59,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60S D97N C150V Q176S",4
"lib1","SARS-CoV-2","TAAGTGCCTAACCAAA",3,72.45,8.59,-2.17,0.11,2.44,1.13,0,">1 nonsynonymous","L57H N120K Y159F",3
"lib1","SARS-CoV-2","TAAGTGCGCAAACTTC",4,75.98,8.21,-2.55,0.26,1.5,1.08,0.02,">1 nonsynonymous","R127V S164K",2
"lib1","SARS-CoV-2","TAAGTGCTTAGGTACT",4,29.23,6.1,-4.66,1.27,1.5,1.12,0.05,">1 nonsynonymous","E10L A33W T55V F62R P82D",5
"lib1","SARS-CoV-2","TAAGTGGAAAGCTTTG",2,83.53,10.25,-0.51,0.06,2.95,1.02,0,">1 nonsynonymous","G174L T201L",2
"lib1","SARS-CoV-2","TAAGTGGACTAGCTTA",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137S V181T",2
"lib1","SARS-CoV-2","TAAGTGGAGATGAAAA",3,30.14,9.65,-1.11,0.13,1.76,1.07,0.01,">1 nonsynonymous","L60S K94S",2
"lib1","SARS-CoV-2","TAAGTGGCTAACGTAC",3,39.49,6.6,-4.16,0.57,1.5,1.12,0.04,">1 nonsynonymous","G9I K56I C158P",3
"lib1","SARS-CoV-2","TAAGTGTAACGGTGTC",8,82.72,9.38,-1.38,0.12,1.7,1.12,0.01,">1 nonsynonymous","I88T R136K",2
"lib1","SARS-CoV-2","TAAGTGTAATAATCAA",1,7.05,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L131G C150K Q168Y",3
"lib1","SARS-CoV-2","TAAGTGTAATTCTAAA",2,38.02,8.35,-2.41,0.19,1.63,1.2,0.01,">1 nonsynonymous","C61G F156R L162C",3
"lib1","SARS-CoV-2","TAAGTGTAGATCCAAG",1,27.66,8.61,-2.15,0.17,1.69,1.06,0.02,">1 nonsynonymous","D90S N157Y",2
"lib1","SARS-CoV-2","TAAGTGTGTTTGCACG",5,36.12,9.06,-1.71,0.12,2.07,1.12,0.01,">1 nonsynonymous","I2P K56W G117L S200Y",4
"lib1","SARS-CoV-2","TAAGTGTTATTTGGGA",1,29.42,10.13,-0.63,0.08,2.66,1.05,0,">1 nonsynonymous","T3S Y123A T148F",3
"lib1","SARS-CoV-2","TAAGTGTTGATGTCGC",10,144.09,9.94,-0.82,0.11,2.25,1.09,0.01,">1 nonsynonymous","T15R T100A F160L",3
"lib1","SARS-CoV-2","TAAGTTAAACATAAAA",3,3.79,NA,NA,NA,NA,NA,NA,"stop","T15H P82S Y91* K198*",4
"lib1","SARS-CoV-2","TAAGTTAACACTTAAG",7,92.37,6.3,-4.47,0.66,1.5,1.16,0.03,">1 nonsynonymous","C6V D34Q Y91V R127M Y165S",5
"lib1","SARS-CoV-2","TAAGTTAACCTAATTT",4,45.39,7.45,-3.32,0.39,1.5,1,0.05,">1 nonsynonymous","I2K I80W L122R",3
"lib1","SARS-CoV-2","TAAGTTAAGCTTCGAT",1,13.56,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","P54K K94I Y119F L131E C158N Y175K",6
"lib1","SARS-CoV-2","TAAGTTAATGTACTAA",1,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","TAAGTTACATAGGATA",7,52.26,9.81,-0.95,0.13,2.03,1.1,0.01,">1 nonsynonymous","A33H S41T I104C S164N",4
"lib1","SARS-CoV-2","TAAGTTACCTAAGTTA",5,91.78,10.05,-0.71,0.04,2.84,1.01,0,">1 nonsynonymous","F44C K114A",2
"lib1","SARS-CoV-2","TAAGTTACCTAGGCCA",2,16.74,6.36,-4.4,0.75,1.5,1.16,0.03,">1 nonsynonymous","T3A G9V C31N P96F G152Y Q176T",6
"lib1","SARS-CoV-2","TAAGTTACTAGAATGG",1,1.53,NA,NA,NA,NA,NA,NA,"stop","C31* A81Q G146R",3
"lib1","SARS-CoV-2","TAAGTTACTATGGACC",1,6.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y39R R73E V103L V115G L122A T148R",6
"lib1","SARS-CoV-2","TAAGTTAGCTGTTACT",2,0,NA,NA,NA,NA,NA,NA,"stop","S43Y C61A D98*",3
"lib1","SARS-CoV-2","TAAGTTAGGACCCCCA",4,0,NA,NA,NA,NA,NA,NA,"stop","A42* G101I Y121K Y165L K199L",5
"lib1","SARS-CoV-2","TAAGTTAGGCCAGCCA",1,8.03,9.66,-1.1,0.38,1.5,1.06,0.07,"1 nonsynonymous","P96W",1
"lib1","SARS-CoV-2","TAAGTTAGGCGTGCTG",2,45.01,7.8,-2.97,0.19,1.88,1.13,0.01,"1 nonsynonymous","C158N",1
"lib1","SARS-CoV-2","TAAGTTAGTACACTAA",4,14.74,7.28,-3.48,0.33,1.5,1.1,0.04,">1 nonsynonymous","E154V V181F",2
"lib1","SARS-CoV-2","TAAGTTATAACAAGTG",3,103.41,9.18,-1.58,0.06,2.84,1.11,0,"1 nonsynonymous","G166K",1
"lib1","SARS-CoV-2","TAAGTTATATACTCAG",3,48.28,10.62,-0.14,0.07,2.82,1.14,0,">1 nonsynonymous","K114A S184G T201P",3
"lib1","SARS-CoV-2","TAAGTTATATTATAAG",6,58.35,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D90V N107H G146R",3
"lib1","SARS-CoV-2","TAAGTTATCAAATGGG",1,7.52,10.72,-0.04,0.07,2.99,1,0,"1 nonsynonymous","S184N",1
"lib1","SARS-CoV-2","TAAGTTCAGAATAATA",2,6.93,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D59Q V65W D98V P133H",4
"lib1","SARS-CoV-2","TAAGTTCAGTCACGCT",2,25.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L L60V R136G",3
"lib1","SARS-CoV-2","TAAGTTCCACATAACT",9,124.69,10.73,-0.03,0.05,2.91,1.01,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","TAAGTTCCCACTTTCT",3,19.41,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","I88H",1
"lib1","SARS-CoV-2","TAAGTTCGATAAGGGC",7,68.29,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","L95A D112E",2
"lib1","SARS-CoV-2","TAAGTTCGCGTTATAC",2,33.01,7.22,-3.54,0.23,1.5,1.06,0.02,">1 nonsynonymous","Y91S K132S T140L P149L",4
"lib1","SARS-CoV-2","TAAGTTCTCTCTTCGT",5,2.21,NA,NA,NA,NA,NA,NA,"stop","T15S D59* K199I",3
"lib1","SARS-CoV-2","TAAGTTGAGCATTACT",1,6.14,6.12,-4.64,1.28,1.5,1.29,0.03,">1 nonsynonymous","N4C A18V G146K",3
"lib1","SARS-CoV-2","TAAGTTGCAATCCAGC",2,0.56,NA,NA,NA,NA,NA,NA,"stop","F62L P82* K94Q A105L N157Q",5
"lib1","SARS-CoV-2","TAAGTTGGGATTGAAT",3,104.34,8.69,-2.07,0.18,1.73,1.15,0.01,">1 nonsynonymous","F12L D112L",2
"lib1","SARS-CoV-2","TAAGTTGTTCGCCTAA",3,33.2,10.54,-0.22,0.17,2.71,1.02,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TAAGTTTAGTTCGCGG",2,8.31,6.61,-4.15,0.44,1.5,1.15,0.06,">1 nonsynonymous","C6R S41N A81H F160W",4
"lib1","SARS-CoV-2","TAAGTTTCCGGCCGTA",3,86.72,10.18,-0.58,0.07,2.73,1.05,0,"1 nonsynonymous","N13L",1
"lib1","SARS-CoV-2","TAAGTTTCGGCAGACT",7,112.58,10.78,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","L188Q",1
"lib1","SARS-CoV-2","TAAGTTTCTAGCAGTA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106G S113P Y123T N130P F160T",5
"lib1","SARS-CoV-2","TAAGTTTCTAGGAACA",4,39.31,7.75,-3.01,0.3,1.5,1.16,0.03,">1 nonsynonymous","S69A I104S",2
"lib1","SARS-CoV-2","TAAGTTTCTCGATCGG",4,50.98,6.05,-4.72,1.36,1.5,1.29,0.04,">1 nonsynonymous","E10N N109K D137G",3
"lib1","SARS-CoV-2","TAAGTTTGCGTAGCAA",7,118.72,10.72,-0.05,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAAGTTTGGCAATATT",5,1.17,NA,NA,NA,NA,NA,NA,"stop","G9* A14W D59V",3
"lib1","SARS-CoV-2","TAAGTTTTAACCCAAA",3,67.11,8.49,-2.27,0.21,1.5,1.13,0.02,">1 nonsynonymous","V37S R127E",2
"lib1","SARS-CoV-2","TAATAAAAAAAATGGA",9,117.5,10.66,-0.1,0.05,2.94,1.05,0,">1 nonsynonymous","A105S I138L",2
"lib1","SARS-CoV-2","TAATAAAAAACAGCAC",2,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S G74I",2
"lib1","SARS-CoV-2","TAATAAAAAACTCGAG",1,82.78,8.03,-2.73,0.14,2.24,1.09,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","TAATAAAAAATACAAC",4,54.7,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I2L F12P F44D G152V N171L",5
"lib1","SARS-CoV-2","TAATAAAAACCTACTG",10,131.83,10.24,-0.53,0.06,2.64,1.01,0,">1 nonsynonymous","W106I N171M",2
"lib1","SARS-CoV-2","TAATAAAAAGCCTTTT",4,29.17,10.1,-0.66,0.14,2.59,1,0.01,">1 nonsynonymous","G83K R136T",2
"lib1","SARS-CoV-2","TAATAAAAAGGTTCGA",3,202.63,10.73,-0.03,0.04,2.95,1.03,0,">1 nonsynonymous","G9H I104M",2
"lib1","SARS-CoV-2","TAATAAAACACAAAAT",4,129.47,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y39A V65G W106M R136G Y175S",5
"lib1","SARS-CoV-2","TAATAAAACATTATAA",6,99.7,10.74,-0.02,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAAAACGAGATAG",5,76.7,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C61N K94Y D112L Y123A",4
"lib1","SARS-CoV-2","TAATAAAACTAACGCA",3,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38K K87F C102S A105P",4
"lib1","SARS-CoV-2","TAATAAAAGACAGTGG",3,126.35,10.18,-0.58,0.02,2.96,1,0,">1 nonsynonymous","K128I F156R",2
"lib1","SARS-CoV-2","TAATAAAATATAGCGA",1,6.2,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G9F I88S G117L I142S V180T",5
"lib1","SARS-CoV-2","TAATAAAATTAAAAAC",5,76.62,7.8,-2.97,0.21,1.5,1.12,0.01,">1 nonsynonymous","G86W Q168A",2
"lib1","SARS-CoV-2","TAATAAAATTAACCCA",2,22.2,10.85,0.08,0.11,2.9,1.07,0.01,">1 nonsynonymous","V37F P149A L188M",3
"lib1","SARS-CoV-2","TAATAAAATTATGGAT",7,2.3,NA,NA,NA,NA,NA,NA,"stop","L5* Y165F",2
"lib1","SARS-CoV-2","TAATAAACAATCCTCA",6,53.79,10.83,0.07,0.11,2.79,1.12,0.01,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","TAATAAACACCTACCA",3,13.12,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A89N A105P F126I",3
"lib1","SARS-CoV-2","TAATAAACTAACCCGA",1,9.55,10.1,-0.67,0.07,2.02,1,0,">1 nonsynonymous","N13D P133S K198C",3
"lib1","SARS-CoV-2","TAATAAACTATTGTTA",4,14.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12A I88G V115R G146V",4
"lib1","SARS-CoV-2","TAATAAACTCAAAACG",1,15.53,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","K94S Y123G I142S F167R",4
"lib1","SARS-CoV-2","TAATAAACTCCCACTT",1,2.21,NA,NA,NA,NA,NA,NA,"stop","L5* F62S V77L A105V R136T",5
"lib1","SARS-CoV-2","TAATAAACTGGAATAA",1,44.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19R R27A D34G T170P",4
"lib1","SARS-CoV-2","TAATAAACTTGGAGTA",4,39.17,10.91,0.15,0.08,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATAAAGAGCCTCCG",11,91.78,9.4,-1.37,0.08,2.35,1.13,0,">1 nonsynonymous","Y91T Q163R",2
"lib1","SARS-CoV-2","TAATAAAGGGGAATAT",1,63.17,9.74,-1.02,0.15,1.99,1.11,0.01,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","TAATAAAGGTTTATTC",2,55.45,10.4,-0.37,0.07,2.85,1.03,0,">1 nonsynonymous","D98G L122N T148I",3
"lib1","SARS-CoV-2","TAATAAAGTCATGTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15K A33S D97N W106R F126I F156* A192S T201H",8
"lib1","SARS-CoV-2","TAATAAATACACCAGG",6,78.75,6,-4.76,1,1.5,1.14,0.01,">1 nonsynonymous","E10Q D90M D98H S113A G146V T170K L187K",7
"lib1","SARS-CoV-2","TAATAAATAGAAAAAA",2,21.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20R T201N",2
"lib1","SARS-CoV-2","TAATAAATAGAAGAAG",6,17.17,6,-4.76,2,3,1.12,0,">1 nonsynonymous","Y50K T140R G166E",3
"lib1","SARS-CoV-2","TAATAAATCCAAAGTC",2,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L C49F T55I G83K W106Q S129W T170M",7
"lib1","SARS-CoV-2","TAATAAATCGTCTGGC",5,85.53,10.85,0.09,0.07,2.86,1.04,0,"1 nonsynonymous","E154Q",1
"lib1","SARS-CoV-2","TAATAAATGGCCCAAC",5,18.3,8.48,-2.28,0.27,1.5,1.12,0.04,">1 nonsynonymous","P96I P149L N171T",3
"lib1","SARS-CoV-2","TAATAAATGGTTTCCA",1,35.81,10.71,-0.05,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAAATTAAAAATT",7,143.18,10.56,-0.21,0.04,2.89,1.04,0,"1 nonsynonymous","V182I",1
"lib1","SARS-CoV-2","TAATAAATTAAGTTCT",5,0.22,NA,NA,NA,NA,NA,NA,"stop","F8* K56T Y91* P133F T140I",5
"lib1","SARS-CoV-2","TAATAAATTACTGAAT",1,64.11,10.8,0.04,0.08,2.9,1.03,0,">1 nonsynonymous","R27K F62T T85R K198E",4
"lib1","SARS-CoV-2","TAATAAATTCAGATAT",4,60.42,9.91,-0.85,0.08,2.34,1.07,0,">1 nonsynonymous","A14F K199R",2
"lib1","SARS-CoV-2","TAATAAATTCTTCCTT",4,131.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R124C K132T",2
"lib1","SARS-CoV-2","TAATAACAAAGATTAA",3,20.09,6,-4.76,1.94,2.15,1.15,0.03,">1 nonsynonymous","P7R Y91H C158H",3
"lib1","SARS-CoV-2","TAATAACAATCGCGCG",4,99.49,10.73,-0.03,0.04,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAACAATGTACTA",2,37.72,10.8,0.04,0.07,2.86,1.08,0,"1 nonsynonymous","N151M",1
"lib1","SARS-CoV-2","TAATAACACAAAGAAA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","F12L A42* K56M D68V P82M V181M",6
"lib1","SARS-CoV-2","TAATAACATCAAACGT",6,118.07,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","G172F",1
"lib1","SARS-CoV-2","TAATAACATGGGCATA",1,38.95,10.81,0.04,0.05,2.97,1.03,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TAATAACCCAAACGTC",1,16.88,6,-4.76,2,1.5,1.25,0.03,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","TAATAACCCGAACTTA",11,184.62,10.16,-0.6,0.07,2.65,1.01,0,">1 nonsynonymous","N4I T100N",2
"lib1","SARS-CoV-2","TAATAACCGCACCCTA",6,5.37,NA,NA,NA,NA,NA,NA,"stop","R27Q V173*",2
"lib1","SARS-CoV-2","TAATAACCGGGAAAGT",3,7.62,NA,NA,NA,NA,NA,NA,"stop","R16* T85M K199T",3
"lib1","SARS-CoV-2","TAATAACCTACAATAA",3,57.89,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y66L G117C Y178I",3
"lib1","SARS-CoV-2","TAATAACCTCCGAAAG",5,128.75,6.54,-4.23,0.19,1.74,1.16,0,">1 nonsynonymous","C150F K198V",2
"lib1","SARS-CoV-2","TAATAACCTTCTCTTT",1,62.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14N S36W G155D Y175V",4
"lib1","SARS-CoV-2","TAATAACGAAGTAAAC",2,10.43,10.72,-0.04,0.09,2.96,1,0.01,"1 nonsynonymous","Q144K",1
"lib1","SARS-CoV-2","TAATAACGCCGAGAAA",2,38.15,6.56,-4.2,0.68,1.5,1.18,0.04,">1 nonsynonymous","N4V N24A D90P D97T",4
"lib1","SARS-CoV-2","TAATAACGCGTAACGA",4,49.26,10.79,0.03,0.07,2.87,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATAACGCTATAAAA",3,6.16,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N1H N13T K128N F167S C195Q",5
"lib1","SARS-CoV-2","TAATAACGGCAATATC",4,52.34,10.23,-0.53,0.05,2.87,1.02,0,">1 nonsynonymous","C61V A81V",2
"lib1","SARS-CoV-2","TAATAACGGTATTTCG",5,35.17,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C49K N58M Y91S Q176I",4
"lib1","SARS-CoV-2","TAATAACGTAATATGA",1,25.6,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R127P E141L F185Y",3
"lib1","SARS-CoV-2","TAATAACGTAGAAAAG",1,10.93,10.58,-0.18,0.11,2.8,1.12,0,"1 nonsynonymous","P54N",1
"lib1","SARS-CoV-2","TAATAACTAACAAATT",1,18.51,9.69,-1.07,0.16,2.62,1.14,0.01,">1 nonsynonymous","T100W Y143L",2
"lib1","SARS-CoV-2","TAATAACTACTCAAAC",1,56.53,9.45,-1.32,0.08,2.6,1.15,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","TAATAACTAGTCCGAA",7,119.21,6.07,-4.7,0.78,1.5,1.21,0.01,">1 nonsynonymous","I2A Y39F K87S L95P",4
"lib1","SARS-CoV-2","TAATAACTCCTACATG",2,2.3,NA,NA,NA,NA,NA,NA,"stop","F62L Q84* Y119T Q176L",4
"lib1","SARS-CoV-2","TAATAACTGAGTAAGC",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P Y50N V103I L122R S129H Q144K F156N S164L",8
"lib1","SARS-CoV-2","TAATAAGAACAACATA",6,159.61,10.77,0,0.07,2.9,1.06,0,">1 nonsynonymous","I2E K198R",2
"lib1","SARS-CoV-2","TAATAAGACTCACTAT",2,29.57,6.67,-4.1,0.17,1.6,1.09,0,">1 nonsynonymous","T100P Q176R",2
"lib1","SARS-CoV-2","TAATAAGATAAAAGCA",7,119.17,10.21,-0.56,0.04,2.79,1.02,0,">1 nonsynonymous","F44A N58T",2
"lib1","SARS-CoV-2","TAATAAGATTATTATA",2,55.32,10.67,-0.1,0.05,2.93,1,0,"1 nonsynonymous","Y39C",1
"lib1","SARS-CoV-2","TAATAAGCAAACTACC",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R V103E",2
"lib1","SARS-CoV-2","TAATAAGCAATCGCGG",4,49.43,9.92,-0.85,0.1,2.46,1.02,0,">1 nonsynonymous","L57S N64C T201Q",3
"lib1","SARS-CoV-2","TAATAAGCATCTCGTT",5,73.7,9.79,-0.97,0.12,2.42,1.09,0.01,">1 nonsynonymous","A33R T46N T55D L122V",4
"lib1","SARS-CoV-2","TAATAAGCGAGAAAAT",3,82.97,9.91,-0.85,0.11,2.01,1.04,0,">1 nonsynonymous","V11P R27L F62C S147P Y175W",5
"lib1","SARS-CoV-2","TAATAAGGAGTCAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* Y91L",2
"lib1","SARS-CoV-2","TAATAAGGCCGATAAT",2,100.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38G Q79S F99L R127L Y175N",5
"lib1","SARS-CoV-2","TAATAAGGTTAAGAAT",5,36.52,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","P7F G86M S129I V173E",4
"lib1","SARS-CoV-2","TAATAAGTAACTACGT",2,45.63,9.24,-1.53,0.07,2.74,1.14,0,">1 nonsynonymous","F44T K87S V115S",3
"lib1","SARS-CoV-2","TAATAAGTAGTACGTA",3,68.53,9.78,-0.98,0.13,2.2,1.08,0.01,">1 nonsynonymous","V32G R136S",2
"lib1","SARS-CoV-2","TAATAAGTATTAAATC",7,80.25,10.78,0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAATAAATAGATA",1,42.72,10.58,-0.19,0.05,2.97,1,0,">1 nonsynonymous","C61E D97M E141R",3
"lib1","SARS-CoV-2","TAATAATAAGAAAATG",1,13.7,9.83,-0.93,0.17,2.57,1.07,0.01,">1 nonsynonymous","T3M F12L Q144M",3
"lib1","SARS-CoV-2","TAATAATAAGTATCGT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101N V181Q",2
"lib1","SARS-CoV-2","TAATAATACCATTGAG",7,112.12,8.7,-2.06,0.11,2.06,1.14,0.01,"1 nonsynonymous","F167L",1
"lib1","SARS-CoV-2","TAATAATACTACCGCT",2,0.14,NA,NA,NA,NA,NA,NA,"stop","N4* V32D",2
"lib1","SARS-CoV-2","TAATAATAGTGAGCCT",1,7.29,6.29,-4.48,0.32,1.5,1.03,0.01,">1 nonsynonymous","T3C V77P G86V G166L S184C",5
"lib1","SARS-CoV-2","TAATAATATAATCTAC",2,44.37,10.35,-0.41,0.06,2.9,1.03,0,">1 nonsynonymous","T46I V52W",2
"lib1","SARS-CoV-2","TAATAATCAAAACCTA",6,0,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","TAATAATCCCAGTCTC",3,3.59,NA,NA,NA,NA,NA,NA,"stop","S41C G83*",2
"lib1","SARS-CoV-2","TAATAATCCCGTCCGT",1,19.92,10.75,-0.02,0.13,2.88,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAATAATCGAGTAAGC",3,13.69,10.26,-0.51,0.07,2.82,1.02,0,">1 nonsynonymous","A18K S43N K48M",3
"lib1","SARS-CoV-2","TAATAATCGCTCACAA",4,42.64,10.54,-0.23,0.04,2.97,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","TAATAATCTATGACGG",5,62.14,10.78,0.02,0.09,2.85,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAATGAAAATGGG",2,28.09,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L5I Q84R G101L N157D",4
"lib1","SARS-CoV-2","TAATAATGAAATTTAT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72A",1
"lib1","SARS-CoV-2","TAATAATGCCCTACAC",3,199.39,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F17G C31G T85S A105V R179T S184Y",6
"lib1","SARS-CoV-2","TAATAATGCGTTTCGA",2,64.84,9.62,-1.14,0.05,2.81,1.03,0,">1 nonsynonymous","I142D Q168W",2
"lib1","SARS-CoV-2","TAATAATGGATCAGAA",4,5.14,6.3,-4.47,2,1.5,1.12,0.03,"1 nonsynonymous","V180R",1
"lib1","SARS-CoV-2","TAATAATGTAATAGAA",2,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136S G174V",2
"lib1","SARS-CoV-2","TAATAATGTAGACTTC",9,45.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30G V37H K56R F99L G146V L188W",6
"lib1","SARS-CoV-2","TAATAATGTCTATCTC",2,58.91,10.39,-0.37,0.11,2.8,1.04,0,"1 nonsynonymous","F44E",1
"lib1","SARS-CoV-2","TAATAATGTGTAACAA",5,0.76,NA,NA,NA,NA,NA,NA,"stop","L60* D97H",2
"lib1","SARS-CoV-2","TAATAATTCCACAAAA",9,135.49,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K48P Y91T D98M",3
"lib1","SARS-CoV-2","TAATAATTCGAGGTGT",5,285.36,10.49,-0.27,0.03,2.9,1.03,0,">1 nonsynonymous","T85D A190S K199N",3
"lib1","SARS-CoV-2","TAATAATTCTAAAGAT",3,12.26,8.19,-2.58,0.21,2.21,1.08,0.01,">1 nonsynonymous","N24R D34N N157C",3
"lib1","SARS-CoV-2","TAATAATTGTGTCAGT",3,15.79,7.03,-3.74,0.3,1.5,1.06,0.02,">1 nonsynonymous","F17T S36R Y119R",3
"lib1","SARS-CoV-2","TAATAATTTTTTAAGA",3,12.38,6,-4.76,2,3,1.22,0,">1 nonsynonymous","V32F L95G V103T G155D T170K",5
"lib1","SARS-CoV-2","TAATACAAAAAAGTTC",2,48.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Q V77P",2
"lib1","SARS-CoV-2","TAATACAAAAATGGAA",6,32.23,9.03,-1.73,0.22,1.5,1.1,0.02,"1 nonsynonymous","L183C",1
"lib1","SARS-CoV-2","TAATACAAAATTAAGA",2,63.94,10.26,-0.51,0.06,2.76,1,0,">1 nonsynonymous","F62E G152A",2
"lib1","SARS-CoV-2","TAATACAAAGAAAACC",2,45.35,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F44Q P96D Y175L",3
"lib1","SARS-CoV-2","TAATACAAAGCATTAG",7,68.8,8.35,-2.42,0.18,1.82,1.14,0.02,">1 nonsynonymous","I2Q Q84K V153E F167L",4
"lib1","SARS-CoV-2","TAATACAAATAAAAAT",4,83.65,10,-0.77,0.05,2.83,1.07,0,">1 nonsynonymous","L122T Y143V",2
"lib1","SARS-CoV-2","TAATACAAATACATAT",1,12.7,10.71,-0.05,0.08,2.94,1.04,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","TAATACAAGATGATCC",1,57.36,10.61,-0.16,0.06,2.93,1.03,0,">1 nonsynonymous","D59R I142V",2
"lib1","SARS-CoV-2","TAATACAATCAAACTA",5,77.46,6,-4.76,1.35,1.5,1.12,0.01,">1 nonsynonymous","N107A G152S Y165C",3
"lib1","SARS-CoV-2","TAATACACAAAAAAAT",1,11.94,6,-4.76,2,3,1.05,0,">1 nonsynonymous","C31K S36C C49E D98A Y119E",5
"lib1","SARS-CoV-2","TAATACACACCAAGAG",2,21.63,8.64,-2.13,0.36,1.5,1,0.08,">1 nonsynonymous","G86S Y91N",2
"lib1","SARS-CoV-2","TAATACACCCCAAACA",2,0.53,NA,NA,NA,NA,NA,NA,"stop","I72S Y93*",2
"lib1","SARS-CoV-2","TAATACACCCGCTCTA",1,43.82,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F8D N107L T170S",3
"lib1","SARS-CoV-2","TAATACAGACAGGATT",1,6.83,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V20G Y91D D112M Q144L",4
"lib1","SARS-CoV-2","TAATACAGACCCAATC",3,35.14,10.31,-0.45,0.07,2.73,1.1,0,">1 nonsynonymous","T3P V20A",2
"lib1","SARS-CoV-2","TAATACAGAGTCCACG",2,49.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D97V E135P",2
"lib1","SARS-CoV-2","TAATACAGGAATGTGT",6,17.89,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","I2Q K56S N64Y L95F V103G N157Y",6
"lib1","SARS-CoV-2","TAATACAGGGCTACAA",1,22,10.52,-0.25,0.08,2.93,1,0,">1 nonsynonymous","S43R D59R G116A",3
"lib1","SARS-CoV-2","TAATACAGTATATAGA",1,7.95,8.56,-2.2,0.22,1.75,1.08,0.01,">1 nonsynonymous","V11L A33Y F44I A89C P133M",5
"lib1","SARS-CoV-2","TAATACAGTGAATTAT",2,31.26,8.71,-2.05,0.1,2.86,1.05,0,">1 nonsynonymous","F44A L125R",2
"lib1","SARS-CoV-2","TAATACATAAAAATTA",2,26.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","R73L T100L D112E",3
"lib1","SARS-CoV-2","TAATACATATGCCGTA",6,54.93,10.77,0.01,0.06,2.91,1.04,0,">1 nonsynonymous","Y35I V115P",2
"lib1","SARS-CoV-2","TAATACATTAATAAGG",2,43.69,10.78,0.02,0.09,2.92,1.04,0,"1 nonsynonymous","T55V",1
"lib1","SARS-CoV-2","TAATACCAAAAGCAAA",6,28.73,9.25,-1.51,0.07,2.92,1.04,0,">1 nonsynonymous","N24S Q168L",2
"lib1","SARS-CoV-2","TAATACCAAAGCACAG",5,80.45,9.18,-1.59,0.06,2.82,1.12,0,"1 nonsynonymous","G117I",1
"lib1","SARS-CoV-2","TAATACCAAATAAGAA",4,238.84,10.67,-0.1,0.03,2.94,1.02,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","TAATACCAAGCAATTT",4,65.54,10.78,0.02,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATACCAGCAGCTGA",4,31.79,6,-4.76,0.96,1.5,1.11,0.01,">1 nonsynonymous","N1Q G9W R27V Q84V A89W K128L Y143S S200I",8
"lib1","SARS-CoV-2","TAATACCAGTAGTTCG",2,29.24,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A14N L60V F134S Y159S F167M",5
"lib1","SARS-CoV-2","TAATACCAGTTCTATA",8,146.59,10.74,-0.02,0.08,2.92,1.07,0,"1 nonsynonymous","S36D",1
"lib1","SARS-CoV-2","TAATACCATAAGCTAT",6,51.34,9.62,-1.15,0.14,1.96,1.04,0.01,">1 nonsynonymous","P133T G152M",2
"lib1","SARS-CoV-2","TAATACCATCTCTACA",3,72.92,10.11,-0.66,0.06,2.62,1,0,">1 nonsynonymous","T15V V37C I104V",3
"lib1","SARS-CoV-2","TAATACCATTCTTTAA",3,18.14,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","C31T F99L V103G G146H G166H Q176K V181L",7
"lib1","SARS-CoV-2","TAATACCGAAAAATAT",2,67.74,9.26,-1.51,0.22,1.5,1.08,0.03,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","TAATACCGGAAAATCC",5,67.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V52S L60W A81F",3
"lib1","SARS-CoV-2","TAATACCGGTATAATT",1,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H S200F",2
"lib1","SARS-CoV-2","TAATACCTAGAACCAA",2,35.73,10.63,-0.14,0.04,2.95,1,0,"1 nonsynonymous","N4W",1
"lib1","SARS-CoV-2","TAATACCTATTGTTTT",7,24.99,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","A22M K94I E141I F156S F167Y L187K",6
"lib1","SARS-CoV-2","TAATACCTTTGCTTTA",5,75.75,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I28V D90L R124F P169N",4
"lib1","SARS-CoV-2","TAATACGAAACTTACC",6,51.19,6,-4.76,1.58,2.2,1.1,0,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","TAATACGAAAGACGAA",3,74.74,10.59,-0.17,0.05,2.94,1,0,">1 nonsynonymous","A42T P149M T201D",3
"lib1","SARS-CoV-2","TAATACGAAGCAAGAT",8,48.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P82Y A105K N151K",3
"lib1","SARS-CoV-2","TAATACGATTAATGAA",5,64.29,9.29,-1.47,0.15,1.88,1.11,0.01,">1 nonsynonymous","C61E Q144M F167Y",3
"lib1","SARS-CoV-2","TAATACGATTCACCTG",8,0.48,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TAATACGCAGTTCTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","N13Y S19K D59Y E141* P149T",5
"lib1","SARS-CoV-2","TAATACGCCAGTAGAC",5,0.47,NA,NA,NA,NA,NA,NA,"stop","F12R D97* K128R I142T",4
"lib1","SARS-CoV-2","TAATACGCTCGGTCAT",6,11.45,6.12,-4.65,0.56,3,1.2,0.01,">1 nonsynonymous","A42Y G83I N107T S139G C150S",5
"lib1","SARS-CoV-2","TAATACGGATTCACTG",5,86.26,10.22,-0.54,0.09,2.72,1,0,">1 nonsynonymous","A81T K128Q K198L",3
"lib1","SARS-CoV-2","TAATACGGCCTACATT",7,282.08,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P133L Y143E Y165V P177N L187H",5
"lib1","SARS-CoV-2","TAATACGTAATAACTG",6,88.34,9.2,-1.56,0.07,2.83,1.12,0,"1 nonsynonymous","Y119D",1
"lib1","SARS-CoV-2","TAATACGTATTGGTGA",4,42.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N92V A105D Y119V F167P",4
"lib1","SARS-CoV-2","TAATACTAACAATTCT",6,84.39,9.45,-1.32,0.2,1.5,1.12,0.01,">1 nonsynonymous","T46A D90N F99W N110R K128F",5
"lib1","SARS-CoV-2","TAATACTACACTACGA",1,27.88,8.44,-2.33,0.31,1.5,1.16,0.03,"1 nonsynonymous","W23K",1
"lib1","SARS-CoV-2","TAATACTCATCGCCAA",3,71.65,10.86,0.1,0.07,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATACTCCCACAATT",7,82.16,6,-4.76,1.37,1.5,1.14,0,">1 nonsynonymous","V37A T55P F126T S147I P177S",5
"lib1","SARS-CoV-2","TAATACTCTACCAAAT",8,59.09,10.3,-0.46,0.07,2.7,1.05,0,">1 nonsynonymous","V37K Y50H",2
"lib1","SARS-CoV-2","TAATACTGAAAAATAG",4,40,10.83,0.07,0.07,2.93,1.06,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","TAATACTGATACCCAC",2,1.33,NA,NA,NA,NA,NA,NA,"stop","I28V P82M V103T S139* G155V",5
"lib1","SARS-CoV-2","TAATACTGATACTTCT",6,86.45,10.82,0.06,0.06,2.93,1.01,0,">1 nonsynonymous","G9R Q163A V173K",3
"lib1","SARS-CoV-2","TAATACTGCTACACAG",5,60.59,8.69,-2.07,0.11,2.38,1.11,0.01,">1 nonsynonymous","E10L A145P",2
"lib1","SARS-CoV-2","TAATACTGGTAATTAT",6,1.26,NA,NA,NA,NA,NA,NA,"stop","V37R L122*",2
"lib1","SARS-CoV-2","TAATACTGTCCACGCA",2,62.06,9.93,-0.84,0.14,1.93,1.08,0.01,">1 nonsynonymous","V65N K198V",2
"lib1","SARS-CoV-2","TAATACTTAAAATTCA",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L K26Q Y50S G83F T100S Q163S",6
"lib1","SARS-CoV-2","TAATACTTAACTCAAC",5,21.82,6,-4.76,1.99,1.5,1.31,0.05,">1 nonsynonymous","I88G T170S",2
"lib1","SARS-CoV-2","TAATACTTGTATGTCC",4,53.69,9.68,-1.08,0.12,2.04,1.06,0.01,">1 nonsynonymous","A18V E135M Y143F",3
"lib1","SARS-CoV-2","TAATACTTTTGTCACA",1,26.37,9.64,-1.13,0.13,2.11,1.17,0.01,">1 nonsynonymous","A89S V115F I138F",3
"lib1","SARS-CoV-2","TAATACTTTTTATAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","R16M T85K V103* Y121H P161L",5
"lib1","SARS-CoV-2","TAATAGAAAAAAAATA",1,28.35,10.48,-0.28,0.04,2.95,1.01,0,">1 nonsynonymous","N13A K56E",2
"lib1","SARS-CoV-2","TAATAGAAATTGATGT",2,49.25,10.61,-0.16,0.04,2.93,1.04,0,">1 nonsynonymous","Y35I K48R S139K",3
"lib1","SARS-CoV-2","TAATAGAACCTAGAGT",2,11.89,6.2,-4.57,0.93,2.59,1.23,0.03,">1 nonsynonymous","F8E D97H V103T I142T",4
"lib1","SARS-CoV-2","TAATAGAATTCAAGTT",1,62.11,9.57,-1.19,0.12,2.4,1.13,0.01,">1 nonsynonymous","Y21F K114V I142H N151H",4
"lib1","SARS-CoV-2","TAATAGACACTAAGCA",3,73.58,10.54,-0.22,0.13,2.76,1.14,0.01,">1 nonsynonymous","G83F I138T V153G",3
"lib1","SARS-CoV-2","TAATAGACCCACCTTT",5,2.19,NA,NA,NA,NA,NA,NA,"stop","N4I S41P C61* L95S Y121N R127N Q144D",7
"lib1","SARS-CoV-2","TAATAGACTAAATTTA",4,17.43,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N64L G101L R127I",3
"lib1","SARS-CoV-2","TAATAGACTGTTTATG",6,4.3,NA,NA,NA,NA,NA,NA,"stop","L122C I138N F160W F167C Y175*",5
"lib1","SARS-CoV-2","TAATAGAGAAATGTAA",6,897.21,NA,NA,NA,NA,NA,NA,"stop","K48* I72N D98K F167V",4
"lib1","SARS-CoV-2","TAATAGAGGACGGGAA",4,22.78,10.5,-0.26,0.11,2.82,1.03,0.01,"1 nonsynonymous","D97C",1
"lib1","SARS-CoV-2","TAATAGAGGCTAAAAA",6,91.4,10.17,-0.59,0.08,2.54,1,0,"1 nonsynonymous","T100G",1
"lib1","SARS-CoV-2","TAATAGATAGTTACTT",1,40.88,7.99,-2.78,0.45,1.5,1.2,0.06,">1 nonsynonymous","Y91S V103K Y121P P149I",4
"lib1","SARS-CoV-2","TAATAGATAGTTCTAG",3,29.2,10.8,0.03,0.07,2.86,1.06,0,">1 nonsynonymous","N58M L122R I138R E154S S200L",5
"lib1","SARS-CoV-2","TAATAGATATCTATAT",5,74.72,6.75,-4.02,0.15,2.02,1.08,0,">1 nonsynonymous","L125V F167M",2
"lib1","SARS-CoV-2","TAATAGATGATCACGG",3,11.19,9.09,-1.68,0.22,2.77,1.18,0.01,"1 nonsynonymous","G117D",1
"lib1","SARS-CoV-2","TAATAGATTATCCAAA",7,42.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44D G83S A105S P161F",4
"lib1","SARS-CoV-2","TAATAGATTCCAACTG",1,10.83,6.17,-4.6,0.72,1.5,1.17,0.04,">1 nonsynonymous","C61Y E141Q E154Y N157K",4
"lib1","SARS-CoV-2","TAATAGATTCCGGCTA",11,72.84,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86L I104T N120L E154W",4
"lib1","SARS-CoV-2","TAATAGCACAACGAGA",6,249.31,9.84,-0.93,0.08,2.1,1.06,0,">1 nonsynonymous","E10H Y178S",2
"lib1","SARS-CoV-2","TAATAGCACCCCTACC",10,99.47,10.26,-0.51,0.05,2.89,1.01,0,">1 nonsynonymous","K56M Y121L S139N",3
"lib1","SARS-CoV-2","TAATAGCACGAAAAAT",2,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","TAATAGCAGATACTAC",16,35.62,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","T3K D34S L95R",3
"lib1","SARS-CoV-2","TAATAGCCTAAGCCAT",13,260.26,9.62,-1.14,0.03,2.86,1.07,0,"1 nonsynonymous","Y143V",1
"lib1","SARS-CoV-2","TAATAGCCTCCATACG",3,79.73,10.64,-0.13,0.08,2.78,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAGCGCAGCCGCT",5,22.93,8.72,-2.04,0.24,1.5,1.07,0.03,">1 nonsynonymous","N4I L38R",2
"lib1","SARS-CoV-2","TAATAGCTACTCGAAG",3,14.57,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","C102H G116M",2
"lib1","SARS-CoV-2","TAATAGCTAGACTATA",2,1.93,NA,NA,NA,NA,NA,NA,"stop","R16I N40* P96N I104K",4
"lib1","SARS-CoV-2","TAATAGCTCCAAAACA",8,87.56,6.27,-4.5,0.31,1.5,1.1,0.01,">1 nonsynonymous","V11L Y39V Y93M S113L K132M G152T Y165V G172V",8
"lib1","SARS-CoV-2","TAATAGCTCGGGCCGG",3,10.23,8.29,-2.48,0.4,1.64,1.42,0.05,">1 nonsynonymous","V52P C61F T140Y",3
"lib1","SARS-CoV-2","TAATAGCTGAGCCATC",8,55.94,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","T3Q A105L P177A G196T T201L",5
"lib1","SARS-CoV-2","TAATAGCTGTATGGGT",3,26.16,10.01,-0.76,0.09,2.77,1.09,0,">1 nonsynonymous","K87E T140Q",2
"lib1","SARS-CoV-2","TAATAGGACGTATCCA",5,38.57,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R16Q W106P",2
"lib1","SARS-CoV-2","TAATAGGATTATTGTA",7,2.13,NA,NA,NA,NA,NA,NA,"stop","T15K G86* D97F E141Y P149* N151M",6
"lib1","SARS-CoV-2","TAATAGGCACTTGCAA",5,84.09,10.67,-0.09,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAGGCTACACATA",6,8.54,6.68,-4.08,0.49,1.5,1.16,0.03,">1 nonsynonymous","W106D T201R",2
"lib1","SARS-CoV-2","TAATAGGCTGACATAA",4,1.48,NA,NA,NA,NA,NA,NA,"stop","T3K T63Y R73*",3
"lib1","SARS-CoV-2","TAATAGGGAAGCGTAA",4,31.33,6.33,-4.43,0.52,1.5,1.19,0.03,">1 nonsynonymous","R25Q D98L N107S Y119G N130S T140F",6
"lib1","SARS-CoV-2","TAATAGGTAAATACCA",6,45.58,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R127V R136N",2
"lib1","SARS-CoV-2","TAATAGGTCCTATCAT",2,41.23,10.6,-0.17,0.07,2.9,1,0,"1 nonsynonymous","T100N",1
"lib1","SARS-CoV-2","TAATAGTATGGTTATT",3,48.57,10.76,0,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAGTCACAAGCCC",2,26.26,10.4,-0.36,0.07,2.85,1,0,">1 nonsynonymous","V37M Q163S E186M",3
"lib1","SARS-CoV-2","TAATAGTCATACATTA",4,27.42,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V103K R127S",2
"lib1","SARS-CoV-2","TAATAGTCATATAATA",3,26.43,7.32,-3.44,0.45,1.5,1.01,0.07,">1 nonsynonymous","P54Q T63V G86I V103R K128E",5
"lib1","SARS-CoV-2","TAATAGTCCAGAATCA",3,25.09,10.82,0.06,0.1,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATAGTGCTGCAGCT",5,23.96,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Y35V I88F G101A F126S Y165I",5
"lib1","SARS-CoV-2","TAATAGTGTGCATATC",7,87.06,9.51,-1.26,0.16,1.53,1.17,0.01,">1 nonsynonymous","N4S L122I F134E G152A",4
"lib1","SARS-CoV-2","TAATAGTTACGGGTAA",2,47.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21T S41T A81S K128L T148A N171T",6
"lib1","SARS-CoV-2","TAATAGTTATAGGAAA",5,0.4,NA,NA,NA,NA,NA,NA,"stop","L60* R73N",2
"lib1","SARS-CoV-2","TAATAGTTCCGTAAAA",6,39.37,9.67,-1.09,0.13,1.74,1.17,0.01,">1 nonsynonymous","V77T E135V L188S",3
"lib1","SARS-CoV-2","TAATATAAAAAGTCTT",6,72.09,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D90I Y165T",2
"lib1","SARS-CoV-2","TAATATAAACTACCAA",7,152.57,10.29,-0.48,0.04,2.94,1.02,0,">1 nonsynonymous","Y50F F156V T201W",3
"lib1","SARS-CoV-2","TAATATAAAGATGACC",2,10.92,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I88N L95A E141G N171G K198Q",5
"lib1","SARS-CoV-2","TAATATAAATGAGTGA",2,6.28,8.69,-2.07,0.39,2.1,1.15,0.06,">1 nonsynonymous","C6K D68P S200R",3
"lib1","SARS-CoV-2","TAATATAACAGGCATA",5,0,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","TAATATAAGACTAACT",8,59.33,10.83,0.07,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATATAAGTCATAAA",3,65.21,8.09,-2.67,0.19,1.5,1.13,0.01,"1 nonsynonymous","Q176F",1
"lib1","SARS-CoV-2","TAATATAATAAAAGGC",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V F70N E141I V173Q T201P",5
"lib1","SARS-CoV-2","TAATATAATAGAATAA",1,11.76,10.38,-0.39,0.18,1.86,1.06,0.01,">1 nonsynonymous","N1S F12T",2
"lib1","SARS-CoV-2","TAATATAATAGATATG",3,58.73,10.18,-0.59,0.05,2.82,1.01,0,">1 nonsynonymous","V65F T85D",2
"lib1","SARS-CoV-2","TAATATAATAGATTCA",1,17.05,6.4,-4.36,0.52,1.5,1.14,0.04,">1 nonsynonymous","L57T N151I Y159L",3
"lib1","SARS-CoV-2","TAATATAATTGGTACG",10,120.68,10.76,-0.01,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATATACACTGATCA",4,37.62,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","C61L G86D D112T N151I",4
"lib1","SARS-CoV-2","TAATATACAGAAATTA",1,6.35,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S139C Y178L P197L",3
"lib1","SARS-CoV-2","TAATATACCAAGGAAT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","D75L A89S V103L Y119L S129*",5
"lib1","SARS-CoV-2","TAATATACCAATTCAC",1,9.23,9.84,-0.92,0.24,1.54,1,0.03,"1 nonsynonymous","R127Q",1
"lib1","SARS-CoV-2","TAATATACGAAGGTGA",4,63.63,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","T15A G174V R179K P197W T201P",5
"lib1","SARS-CoV-2","TAATATACGCTGAAAA",2,47.62,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","K48V I138T N157L G166D",4
"lib1","SARS-CoV-2","TAATATACTACTCTAC",1,1.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44Q",1
"lib1","SARS-CoV-2","TAATATACTCAGCTAA",4,94.14,8.41,-2.36,0.12,2.59,1.09,0.01,">1 nonsynonymous","F44A A145D",2
"lib1","SARS-CoV-2","TAATATACTCAGTAGT",3,18.34,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A33E T100K S147C T170L",4
"lib1","SARS-CoV-2","TAATATAGACAATGCT",2,15.07,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V20L S45P G83I N92A Y143L",5
"lib1","SARS-CoV-2","TAATATAGCAGATGGT",5,4.58,NA,NA,NA,NA,NA,NA,"stop","P7* S147L",2
"lib1","SARS-CoV-2","TAATATAGCCCTAATA",6,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S C6K F62R D68L G86F N120A V180S S200L",8
"lib1","SARS-CoV-2","TAATATAGCCTATCAT",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M L95Y N107S P133V P149C E154W",6
"lib1","SARS-CoV-2","TAATATAGTAAGATAC",10,2.02,NA,NA,NA,NA,NA,NA,"stop","C61* G152T",2
"lib1","SARS-CoV-2","TAATATAGTTGTACCC",6,11.36,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","I2G D68G V103S",3
"lib1","SARS-CoV-2","TAATATATACGAACCT",2,29.78,10.83,0.06,0.09,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATATATAGAAACAT",11,119.6,10.03,-0.73,0.06,2.83,1.05,0,">1 nonsynonymous","C31T T148D",2
"lib1","SARS-CoV-2","TAATATATCCATGGAC",1,63.15,8.74,-2.03,0.09,2.83,1.1,0,"1 nonsynonymous","L125E",1
"lib1","SARS-CoV-2","TAATATATGTATGGGT",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S Y35R C158R",3
"lib1","SARS-CoV-2","TAATATATTACAGTGG",4,0.78,NA,NA,NA,NA,NA,NA,"stop","I2E G51C F99R S108* S147L P177L H189P",7
"lib1","SARS-CoV-2","TAATATATTCCTTCGC",4,27.35,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","E10P A18R A81P G86W",4
"lib1","SARS-CoV-2","TAATATCAAGTTCACA",5,60.18,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C49D F134N",2
"lib1","SARS-CoV-2","TAATATCACAGATCCG",2,29.75,9.67,-1.09,0.28,1.73,1.17,0.05,">1 nonsynonymous","A33T L60F D68V T100R K114G F126T",6
"lib1","SARS-CoV-2","TAATATCAGATGCCTA",2,16.08,10.44,-0.32,0.08,2.86,1.06,0,">1 nonsynonymous","L5R S36F A42T",3
"lib1","SARS-CoV-2","TAATATCATACTAACT",2,30.62,6,-4.76,0.56,2.11,1.18,0.01,">1 nonsynonymous","V37I T63K W106P K198G",4
"lib1","SARS-CoV-2","TAATATCATACTCCAG",2,9.14,6,-4.76,2,3,1.25,0,">1 nonsynonymous","N1L V65L C102Y",3
"lib1","SARS-CoV-2","TAATATCATCGGAGTC",3,48.24,10.62,-0.14,0.04,2.95,1.01,0,"1 nonsynonymous","D59C",1
"lib1","SARS-CoV-2","TAATATCATCTACATG",7,19.7,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55K V103R",2
"lib1","SARS-CoV-2","TAATATCATTAGAGTT",7,94.85,9.15,-1.62,0.12,1.71,1.17,0.01,">1 nonsynonymous","V77L K94A E141L G196D",4
"lib1","SARS-CoV-2","TAATATCCAACCCCTG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","C6* T170C",2
"lib1","SARS-CoV-2","TAATATCCCCCTCAAT",8,76.96,10.74,-0.02,0.04,2.91,1.05,0,"1 nonsynonymous","N64K",1
"lib1","SARS-CoV-2","TAATATCCCGGGCAAC",1,14.79,9.73,-1.04,0.05,2.96,1.01,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","TAATATCCGCTAATTA",1,28.27,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A89L N157V",2
"lib1","SARS-CoV-2","TAATATCGAACTACCG",5,128.23,6,-4.76,1.11,1.5,1.15,0.01,">1 nonsynonymous","I2E T15I Y175V C195N",4
"lib1","SARS-CoV-2","TAATATCGACTTGGCA",3,3.65,NA,NA,NA,NA,NA,NA,"stop","V37S K94A Y121* N151E",4
"lib1","SARS-CoV-2","TAATATCGCATATAAC",9,52.6,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","S43G N58G N64C I88R D97L F99Y S129F E154I",8
"lib1","SARS-CoV-2","TAATATCGGAGTCGGT",4,15.42,7.06,-3.71,0.43,2.3,1.1,0.04,">1 nonsynonymous","I2P Y35H I138L V182Y",4
"lib1","SARS-CoV-2","TAATATCTAAGCACAT",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R K56L G86S A105N S200P",5
"lib1","SARS-CoV-2","TAATATCTATTGAATT",5,35.63,9.53,-1.23,0.13,1.81,1.15,0.01,">1 nonsynonymous","P133Y P149W Q163R K198P",4
"lib1","SARS-CoV-2","TAATATGACTGCTAAC",1,14.11,7.77,-2.99,0.47,1.5,1.07,0.07,">1 nonsynonymous","G9L N64Y G86R S184T",4
"lib1","SARS-CoV-2","TAATATGAGCACCGCA",4,11.93,10.18,-0.59,0.09,2.95,1.01,0,">1 nonsynonymous","S41A D98C",2
"lib1","SARS-CoV-2","TAATATGATAATGATA",9,120.93,10.29,-0.48,0.05,2.78,1.02,0,">1 nonsynonymous","A22V S129G",2
"lib1","SARS-CoV-2","TAATATGATGCAAACC",3,52.59,10.58,-0.18,0.06,2.95,1,0,"1 nonsynonymous","P149W",1
"lib1","SARS-CoV-2","TAATATGATGCACTCA",6,64.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16I A22G L60T Q79M G83E C158L",6
"lib1","SARS-CoV-2","TAATATGATGTACCTT",6,198.88,10.71,-0.06,0.04,2.9,1.05,0,">1 nonsynonymous","T55F P149S",2
"lib1","SARS-CoV-2","TAATATGCAAGAGCCA",10,12661.75,10.01,-0.75,0.07,2.33,1.02,0,"1 nonsynonymous","P96C",1
"lib1","SARS-CoV-2","TAATATGCATAGCGAA",11,59.6,8.95,-1.82,0.12,1.81,1.12,0.01,">1 nonsynonymous","N13C A33S E141V",3
"lib1","SARS-CoV-2","TAATATGCGAATGAAA",3,0.09,NA,NA,NA,NA,NA,NA,"stop","F8L L95H G146*",3
"lib1","SARS-CoV-2","TAATATGCGATAATTC",10,124.43,10.41,-0.36,0.05,2.92,1.03,0,">1 nonsynonymous","G116S Q144A",2
"lib1","SARS-CoV-2","TAATATGCTTGACCAG",6,81.67,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N58V G155Y Y178D",3
"lib1","SARS-CoV-2","TAATATGGAAATCCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6G A18G A33L F62R F167*",5
"lib1","SARS-CoV-2","TAATATGGAGCTAAGT",3,17.69,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","L5S A14C Y50S T140P N151S",5
"lib1","SARS-CoV-2","TAATATGGGGATATTA",4,31.21,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A89L L122V",2
"lib1","SARS-CoV-2","TAATATGTAAACCAGG",1,115.78,10.6,-0.16,0.04,2.92,1,0,">1 nonsynonymous","A42L T193Y V194G",3
"lib1","SARS-CoV-2","TAATATGTGTGAAGTA",1,5.04,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I80P A105R K198L",3
"lib1","SARS-CoV-2","TAATATTAAAACCGTG",1,23.78,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L95S P149R",2
"lib1","SARS-CoV-2","TAATATTAAAGCCCGG",4,93.32,8.59,-2.18,0.12,2.69,1.06,0.01,">1 nonsynonymous","V65T G166M",2
"lib1","SARS-CoV-2","TAATATTAAATCGATG",2,23.06,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Q144G P161W",2
"lib1","SARS-CoV-2","TAATATTAACACAAGG",3,61.21,8.36,-2.41,0.08,2.65,1.05,0,">1 nonsynonymous","I2G P54L Y175R",3
"lib1","SARS-CoV-2","TAATATTAACGATAGA",2,19.44,7.46,-3.3,0.29,1.5,1.12,0.04,">1 nonsynonymous","E10L L183W",2
"lib1","SARS-CoV-2","TAATATTAATAATGAA",3,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K D68Q K94Y Q168G",4
"lib1","SARS-CoV-2","TAATATTAGTAAAGTA",3,13.75,10.51,-0.26,0.09,2.93,1,0.01,"1 nonsynonymous","S129Y",1
"lib1","SARS-CoV-2","TAATATTATAATACCC",6,75.04,6,-4.76,1.37,1.5,1.15,0,">1 nonsynonymous","N58L T100N S113L",3
"lib1","SARS-CoV-2","TAATATTATTGAACAA",1,7.31,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","D98T S113G C150P Y178I",4
"lib1","SARS-CoV-2","TAATATTCATAAACTT",5,60.48,8.5,-2.27,0.21,1.5,1.08,0.02,">1 nonsynonymous","V37R K94Y E154T G174T",4
"lib1","SARS-CoV-2","TAATATTCATAATGAC",1,29.79,10.35,-0.41,0.07,2.93,1.01,0,">1 nonsynonymous","V52T S53T K132Y",3
"lib1","SARS-CoV-2","TAATATTCGACATCAT",2,24.63,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N64H T85L A105R K128E T201I",5
"lib1","SARS-CoV-2","TAATATTCGCAACTTG",3,7.59,10,-0.76,0.3,2.05,1.16,0.03,">1 nonsynonymous","T15W S41K",2
"lib1","SARS-CoV-2","TAATATTCGCACCGGA",1,10.79,10.83,0.07,0.11,2.95,1.02,0.01,"1 nonsynonymous","F134G",1
"lib1","SARS-CoV-2","TAATATTCTTACTACC",2,7.93,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","E10T Y91M G117S N157R",4
"lib1","SARS-CoV-2","TAATATTGATGGGAAA",3,38.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37G G86Q V103W",3
"lib1","SARS-CoV-2","TAATATTGCTGGAACG",1,8.62,10.52,-0.25,0.17,2.84,1,0.01,">1 nonsynonymous","L5R V153N Y178S",3
"lib1","SARS-CoV-2","TAATATTGGCCAAATA",3,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R F70L D98F N120L Y143N",5
"lib1","SARS-CoV-2","TAATATTGTCTTCACT",6,41.04,10.73,-0.03,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATATTTAGACAATT",1,33.85,9.99,-0.77,0.12,2.12,1.05,0.01,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","TAATATTTCAAACTAT",6,34.45,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T63C G86W P197G",3
"lib1","SARS-CoV-2","TAATATTTTGCGGCGG",9,132.73,10.67,-0.1,0.05,2.9,1.05,0,">1 nonsynonymous","K48L S200I",2
"lib1","SARS-CoV-2","TAATCAAAAAAGAACT",5,101.8,10.18,-0.58,0.04,2.9,1,0,"1 nonsynonymous","V11F",1
"lib1","SARS-CoV-2","TAATCAAAAAATATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K94* E141Y P161V",3
"lib1","SARS-CoV-2","TAATCAAAAACGACTA",3,11.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15N S41P L60Q D98M G116T P149Y",6
"lib1","SARS-CoV-2","TAATCAAACAATGTAA",3,28.93,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","F47L A105R",2
"lib1","SARS-CoV-2","TAATCAAACCGCGACA",5,52.04,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K94L R127V V153D",3
"lib1","SARS-CoV-2","TAATCAAACGATACTA",2,53.9,10.73,-0.03,0.08,2.84,1.11,0,"1 nonsynonymous","N110D",1
"lib1","SARS-CoV-2","TAATCAAACTCCTATT",1,98.42,10.45,-0.31,0.05,2.89,1.02,0,"1 nonsynonymous","Y66S",1
"lib1","SARS-CoV-2","TAATCAAAGTAATAAA",3,39.38,9.29,-1.47,0.05,2.9,1.07,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","TAATCAAAGTGCAAAG",1,15.72,10.64,-0.12,0.12,2.91,1.03,0.01,"1 nonsynonymous","P54A",1
"lib1","SARS-CoV-2","TAATCAACAACTTATA",1,14.46,10.69,-0.08,0.07,2.81,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCAACCAGTTCGG",6,150.45,10.49,-0.27,0.05,2.83,1.03,0,">1 nonsynonymous","K48S K128V E154P Q168F",4
"lib1","SARS-CoV-2","TAATCAACGCATTTCG",5,4,NA,NA,NA,NA,NA,NA,"stop","S36V G74* G146W",3
"lib1","SARS-CoV-2","TAATCAACGCGACTAA",6,47.06,6,-4.76,1.69,1.5,1.16,0.01,">1 nonsynonymous","N4S G101L I142L",3
"lib1","SARS-CoV-2","TAATCAACTACATAGA",3,58.2,10.71,-0.06,0.04,2.96,1,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","TAATCAACTGCGATGG",4,31.78,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y66P G146N",2
"lib1","SARS-CoV-2","TAATCAAGAAGGTACG",3,22.45,6.29,-4.47,0.52,1.5,1.24,0.02,">1 nonsynonymous","N4P Y35L D98K R127T F160Y",5
"lib1","SARS-CoV-2","TAATCAAGACGACTTA",4,37.93,6.79,-3.97,0.31,1.5,1.18,0.02,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","TAATCAAGAGAGTAAT",4,100.32,10.66,-0.11,0.04,2.93,1.02,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","TAATCAAGGATAATTT",3,28.55,7.04,-3.72,0.58,1.5,1.2,0.05,">1 nonsynonymous","L5K F12M S41M W106L Q176L",5
"lib1","SARS-CoV-2","TAATCAAGTCTAATCG",2,41.79,10.18,-0.58,0.05,2.87,1,0,">1 nonsynonymous","A33F K56T S69N K114N F134H",5
"lib1","SARS-CoV-2","TAATCAATAAGAAACA",6,44.68,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","K56T D112G S164V",3
"lib1","SARS-CoV-2","TAATCAATACCGATAG",8,59.14,10.08,-0.68,0.08,2.3,1.07,0,">1 nonsynonymous","E10L T15M K198R",3
"lib1","SARS-CoV-2","TAATCAATATTATCCC",1,5.37,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T55I I88R V103N",3
"lib1","SARS-CoV-2","TAATCAATCTAGAAAG",4,108.23,10.33,-0.43,0.04,2.86,1.02,0,">1 nonsynonymous","A42V N64M S184Q A190S",4
"lib1","SARS-CoV-2","TAATCAATTTTACCCA",2,12.9,9.52,-1.25,0.18,1.84,1.03,0.01,">1 nonsynonymous","Y35D Q84L K198I",3
"lib1","SARS-CoV-2","TAATCACAAAGCGCTA",8,0.22,NA,NA,NA,NA,NA,NA,"stop","P7K R16H L95*",3
"lib1","SARS-CoV-2","TAATCACAATAGGTAC",3,9.91,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N64Y I88G R124E T148L",4
"lib1","SARS-CoV-2","TAATCACAATGGATTG",3,21.09,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N92S F99I",2
"lib1","SARS-CoV-2","TAATCACAATGTACAA",2,31,10.7,-0.06,0.07,2.85,1.08,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","TAATCACACACTCCAG",1,44.6,8.33,-2.43,0.12,2.29,1.12,0.01,">1 nonsynonymous","R16N I28Y S36K Q176F",4
"lib1","SARS-CoV-2","TAATCACCAGTAATAG",5,0.62,NA,NA,NA,NA,NA,NA,"stop","N58R T85N V153*",3
"lib1","SARS-CoV-2","TAATCACCCCACCTTC",3,6.52,6,-4.76,1.58,1.5,1.06,0.01,">1 nonsynonymous","D90F D98L Y143S",3
"lib1","SARS-CoV-2","TAATCACCTCATAACT",4,24.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A81V I88A V153S F167Y",4
"lib1","SARS-CoV-2","TAATCACTGATCATTT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","K56* P96V",2
"lib1","SARS-CoV-2","TAATCACTTTACAGTA",1,4.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131G",1
"lib1","SARS-CoV-2","TAATCAGACTAATAAG",2,62.29,10.74,-0.03,0.08,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCAGAGTACAAAA",10,123.37,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","Y93L N107V T140I P149I",4
"lib1","SARS-CoV-2","TAATCAGATTGGGAAT",14,41.18,6,-4.76,2,1.5,1.21,0.03,"1 nonsynonymous","V103P",1
"lib1","SARS-CoV-2","TAATCAGGAACTCGCT",13,104.22,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V115A R179G",2
"lib1","SARS-CoV-2","TAATCAGGGAATGACC",6,131.44,9.53,-1.24,0.13,1.85,1.1,0.01,">1 nonsynonymous","N1I P7F N30S",3
"lib1","SARS-CoV-2","TAATCAGTAAAAATCC",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16F N120L Y143A Q168L",4
"lib1","SARS-CoV-2","TAATCAGTCCGTCACG",1,17.14,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","L38W D98S K114I R127E E135K",5
"lib1","SARS-CoV-2","TAATCAGTCTACAAGG",2,9.07,10.67,-0.1,0.06,3,1,0,">1 nonsynonymous","N1K S41Y D59R",3
"lib1","SARS-CoV-2","TAATCATAATAGAAAC",2,30.4,10.16,-0.6,0.07,2.87,1,0,"1 nonsynonymous","I28A",1
"lib1","SARS-CoV-2","TAATCATACTCACTAT",3,51.13,10.84,0.07,0.08,2.87,1,0,">1 nonsynonymous","C61R S164A",2
"lib1","SARS-CoV-2","TAATCATAGTTCCAAA",7,118.38,10.67,-0.09,0.04,2.92,1.02,0,">1 nonsynonymous","K94H S184V",2
"lib1","SARS-CoV-2","TAATCATCCGTAACTA",3,1.79,NA,NA,NA,NA,NA,NA,"stop","A22H A42T F47T E141* P197S",5
"lib1","SARS-CoV-2","TAATCATCCGTAAGTC",2,11.03,6.4,-4.36,0.6,1.5,1.08,0.03,">1 nonsynonymous","S19M T55C E135A",3
"lib1","SARS-CoV-2","TAATCATGAATCCAAC",11,192.92,9.55,-1.21,0.11,2,1.07,0,">1 nonsynonymous","Y35S T55H N107S",3
"lib1","SARS-CoV-2","TAATCATGGTCATATT",1,41.82,6.41,-4.35,0.6,1.5,1.13,0.02,">1 nonsynonymous","S69M Y93I S108K R136F",4
"lib1","SARS-CoV-2","TAATCATTAAATTTAA",3,59.5,10.22,-0.55,0.06,2.83,1.07,0,">1 nonsynonymous","F8L V20A I28Y D97T",4
"lib1","SARS-CoV-2","TAATCATTAGGTCCTG",5,32.54,6.16,-4.6,0.43,1.5,1.11,0.01,">1 nonsynonymous","F12R Y165A",2
"lib1","SARS-CoV-2","TAATCATTCCAACCTT",5,128.83,9.11,-1.65,0.06,2.76,1.07,0,">1 nonsynonymous","C6E G166S",2
"lib1","SARS-CoV-2","TAATCATTCGGAACGG",2,7.72,8.69,-2.07,0.2,1.93,1.09,0.01,">1 nonsynonymous","T63F D98S G116Y I138L P149T",5
"lib1","SARS-CoV-2","TAATCATTTCATATAC",2,85.85,10.62,-0.14,0.04,2.95,1,0,"1 nonsynonymous","S19N",1
"lib1","SARS-CoV-2","TAATCCAAAAGTAACC",4,6.42,9.55,-1.21,0.18,2,1,0.01,">1 nonsynonymous","A42T P133R E141F",3
"lib1","SARS-CoV-2","TAATCCAAAGATGTTC",3,27.32,10.71,-0.06,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCCAACCTCTAGT",3,7.79,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","C6N C61I G86R",3
"lib1","SARS-CoV-2","TAATCCAACTTGGCTG",5,57.07,10.52,-0.25,0.05,2.9,1.06,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","TAATCCAAGAATACCT",2,16.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9S V103K G116D Q144T",4
"lib1","SARS-CoV-2","TAATCCAAGAGCGCTT",4,93.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9R Y35R F62L G83I I88G K114T Y178G",7
"lib1","SARS-CoV-2","TAATCCAAGATAACAA",9,26.47,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V52G C158F",2
"lib1","SARS-CoV-2","TAATCCAAGCCAAATT",1,20.22,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T15S L95Q F99Y R179G",4
"lib1","SARS-CoV-2","TAATCCAATTAGGTTT",6,40.79,6.7,-4.07,0.59,1.5,1.23,0.04,">1 nonsynonymous","G9P Y93L",2
"lib1","SARS-CoV-2","TAATCCACATCGCAAA",8,215.24,10.14,-0.62,0.04,2.88,1.02,0,"1 nonsynonymous","V11F",1
"lib1","SARS-CoV-2","TAATCCACGCCGGCGG",1,6.24,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I2G N13V G101M",3
"lib1","SARS-CoV-2","TAATCCACTTCAAACG",2,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101C I104N P133T T148M G166L",5
"lib1","SARS-CoV-2","TAATCCAGCTATGTTT",1,28.18,6.91,-3.85,0.36,1.5,1.01,0.03,">1 nonsynonymous","Y39R K87S I104G S139N Y175L",5
"lib1","SARS-CoV-2","TAATCCAGGAACATAA",4,31.75,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","L5D I88N R179Q",3
"lib1","SARS-CoV-2","TAATCCATAACCGGAC",6,106.29,10.77,0,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCCATACTGCTAG",2,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TAATCCATCCGGATAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I C61H V77P D98S G155W F160T V181P L187R",8
"lib1","SARS-CoV-2","TAATCCCCAAGGTTAC",4,66.3,10.27,-0.5,0.04,2.96,1,0,">1 nonsynonymous","T3Q G174F",2
"lib1","SARS-CoV-2","TAATCCCCAATGCTAA",5,115.19,8.53,-2.24,0.18,2.6,1.14,0.01,">1 nonsynonymous","P54Y G74E D97S F156V",4
"lib1","SARS-CoV-2","TAATCCCGACACACAG",10,76.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G101S K128D P197D",3
"lib1","SARS-CoV-2","TAATCCCGGGATCAGA",1,15.47,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","R16F V77D I138E",3
"lib1","SARS-CoV-2","TAATCCCTAGCGAATG",3,57.25,10.5,-0.26,0.05,2.84,1.07,0,">1 nonsynonymous","T55P T85N",2
"lib1","SARS-CoV-2","TAATCCCTATAGGCCG",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y50W K56* N120C P177L T201K",5
"lib1","SARS-CoV-2","TAATCCCTATCAGCTG",6,42.26,10.27,-0.49,0.03,2.86,1.06,0,">1 nonsynonymous","Y121Q E141S",2
"lib1","SARS-CoV-2","TAATCCGCACACCTAA",10,34.93,NA,NA,NA,NA,NA,NA,"stop","T3W F12* N107R",3
"lib1","SARS-CoV-2","TAATCCGGACCATAAA",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174K",1
"lib1","SARS-CoV-2","TAATCCGGATATGTCC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","I2* F8* L60S N130S D137* Y165K",6
"lib1","SARS-CoV-2","TAATCCGTGCCAGGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y G86D N157G",3
"lib1","SARS-CoV-2","TAATCCTAAAAACTAC",6,162.96,9.93,-0.83,0.04,2.85,1.04,0,">1 nonsynonymous","F62I D97K T170M",3
"lib1","SARS-CoV-2","TAATCCTAGCGATGAT",1,0.71,NA,NA,NA,NA,NA,NA,"stop","F8Y V37* F156T",3
"lib1","SARS-CoV-2","TAATCCTATGAACAAC",2,5.09,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N92K W106V E135I",3
"lib1","SARS-CoV-2","TAATCCTATGGTTAGC",1,22.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R25Q A89Y",2
"lib1","SARS-CoV-2","TAATCCTCCACAAGAC",4,54.34,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","R136E C158R Y165G",3
"lib1","SARS-CoV-2","TAATCCTGATGTCTTT",4,82.72,8.62,-2.15,0.08,2.81,1.1,0,"1 nonsynonymous","N157F",1
"lib1","SARS-CoV-2","TAATCCTGTTAGGGTC",1,8.24,9.82,-0.94,0.15,2.17,1.07,0.01,"1 nonsynonymous","F8C",1
"lib1","SARS-CoV-2","TAATCCTTGATCTTAT",6,41.37,6.1,-4.67,1.52,1.5,1.32,0.05,">1 nonsynonymous","C61H G83L Y119L V181S",4
"lib1","SARS-CoV-2","TAATCGAAACAAGAAG",3,13.53,8.13,-2.63,0.29,1.5,1.11,0.04,">1 nonsynonymous","S69M Q84R I142Q",3
"lib1","SARS-CoV-2","TAATCGAACCTTTGTG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","V11H L60S S139Y P149E F156* Y175V H189N",7
"lib1","SARS-CoV-2","TAATCGAAGATGGCAG",11,67.87,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V65E A89G",2
"lib1","SARS-CoV-2","TAATCGACAAAGAATG",2,20.18,10.19,-0.57,0.12,3,1.01,0,">1 nonsynonymous","N30C Y35F L60S D98Y",4
"lib1","SARS-CoV-2","TAATCGACACAGAAAC",1,18.15,6,-4.76,2,1.5,1.37,0.05,">1 nonsynonymous","L5S A14K S19F S41R",4
"lib1","SARS-CoV-2","TAATCGACCCTGAGAC",9,91.71,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F99V C158P Q168R K199N",4
"lib1","SARS-CoV-2","TAATCGAGACCCCATG",1,16.43,6,-4.76,2,1.5,1.1,0.06,">1 nonsynonymous","D68K R127V P177W",3
"lib1","SARS-CoV-2","TAATCGAGAGATATAC",5,69.08,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I80S G86P L122F",3
"lib1","SARS-CoV-2","TAATCGAGTCTAAACG",3,91.29,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39P N107V C158F",3
"lib1","SARS-CoV-2","TAATCGATACCCCAGG",2,25.61,9.16,-1.6,0.13,1.92,1.12,0.01,">1 nonsynonymous","L95T G174M",2
"lib1","SARS-CoV-2","TAATCGATATCGGGAC",2,28.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F17S Y50H Y93G",3
"lib1","SARS-CoV-2","TAATCGATCGATAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V103* P169L",2
"lib1","SARS-CoV-2","TAATCGATTCATAACT",1,20.74,9.9,-0.86,0.1,2.24,1.06,0,">1 nonsynonymous","I80M S200W",2
"lib1","SARS-CoV-2","TAATCGCAGGCAGGAA",3,49.03,9.72,-1.04,0.06,2.81,1.02,0,">1 nonsynonymous","Y123M Q168L",2
"lib1","SARS-CoV-2","TAATCGCATGACGAAT",6,148.98,10.32,-0.44,0.04,2.81,1.03,0,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","TAATCGCCGAATGGAA",2,14.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60K F167E S184R",3
"lib1","SARS-CoV-2","TAATCGCTAACCCCTT",2,41.98,10.69,-0.07,0.06,2.98,1,0,"1 nonsynonymous","D98Q",1
"lib1","SARS-CoV-2","TAATCGCTACATATTT",8,88.82,10.8,0.03,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCGCTACCGCTCC",18,49.15,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F8L T46K T55N Y91R N157T",5
"lib1","SARS-CoV-2","TAATCGCTGGCTCCAA",2,14.32,10.1,-0.67,0.06,2.99,1.01,0,">1 nonsynonymous","T140A T148Y G174R",3
"lib1","SARS-CoV-2","TAATCGCTTACCATGC",1,21.03,10.17,-0.59,0.08,2.85,1.11,0,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","TAATCGGAAATTTAAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C6* A14R P149F Q168C P197L",5
"lib1","SARS-CoV-2","TAATCGGACTACTCAA",11,195.46,10.76,-0.01,0.06,2.88,1.08,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TAATCGGTCTTCGTTC",5,69.02,8.06,-2.7,0.14,1.5,1.13,0.01,">1 nonsynonymous","F62M D90K S113C T170N",4
"lib1","SARS-CoV-2","TAATCGGTCTTTCGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M D90K S113C T170N",4
"lib1","SARS-CoV-2","TAATCGTAATTATTAA",3,23.58,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T85N Y121T G152V",3
"lib1","SARS-CoV-2","TAATCGTACGTGCTAA",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93I I138L",2
"lib1","SARS-CoV-2","TAATCGTAGAAACCCA",9,97.75,10.66,-0.11,0.05,2.87,1.03,0,">1 nonsynonymous","C61S T85S",2
"lib1","SARS-CoV-2","TAATCGTATATGATAA",10,2.91,NA,NA,NA,NA,NA,NA,"stop","F47R S184*",2
"lib1","SARS-CoV-2","TAATCGTGATCAATCA",3,16.19,9.51,-1.25,0.13,1.91,1.1,0,">1 nonsynonymous","L5R W106R S164Y",3
"lib1","SARS-CoV-2","TAATCGTGCGTGTCTA",2,16.99,9.81,-0.96,0.34,1.5,1.02,0.04,">1 nonsynonymous","S36L W106V",2
"lib1","SARS-CoV-2","TAATCGTGCTAATCCT",2,17.28,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","P7L N92D A105E",3
"lib1","SARS-CoV-2","TAATCGTTGGAGTATA",4,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T T63D V103S L122N",4
"lib1","SARS-CoV-2","TAATCGTTTTAAATAA",1,58.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5V V32T I104M F126E N157D",5
"lib1","SARS-CoV-2","TAATCTAAACCAGTAG",2,52.5,9.34,-1.43,0.12,2.75,1.15,0.01,"1 nonsynonymous","Q176A",1
"lib1","SARS-CoV-2","TAATCTAAATTGACCT",6,59.25,6.2,-4.57,0.6,1.5,1.1,0.01,">1 nonsynonymous","F12R R127M V194L",3
"lib1","SARS-CoV-2","TAATCTAACGGATGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","E76V V103M R136*",3
"lib1","SARS-CoV-2","TAATCTAATAACAAGA",3,14.96,10.69,-0.07,0.09,2.91,1.04,0.01,"1 nonsynonymous","Y39C",1
"lib1","SARS-CoV-2","TAATCTACAAAAATTA",4,43.87,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37W T85E C150V F167Q",4
"lib1","SARS-CoV-2","TAATCTACAGCCTGAA",2,36.41,10.64,-0.12,0.04,2.9,1.02,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","TAATCTAGCTAAAGTA",3,12.06,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","Y121E G166R",2
"lib1","SARS-CoV-2","TAATCTATAAATATAA",2,109.25,10.7,-0.07,0.05,2.89,1.04,0,">1 nonsynonymous","N4S S45H",2
"lib1","SARS-CoV-2","TAATCTATACAAGGGT",3,99.92,10.75,-0.01,0.05,2.92,1.02,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TAATCTATCCAAACCT",1,5.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5E A33G C61Q D112H E135L",5
"lib1","SARS-CoV-2","TAATCTCCACCGCTCC",4,124.56,10.18,-0.58,0.06,2.77,1,0,">1 nonsynonymous","P7T S139R T148I",3
"lib1","SARS-CoV-2","TAATCTCCCCCCCAGG",5,55.07,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","C61N G101T Y123K",3
"lib1","SARS-CoV-2","TAATCTCGATCTTATG",7,164.75,10.1,-0.66,0.09,2.46,1.02,0,">1 nonsynonymous","N1C T63H Y91L",3
"lib1","SARS-CoV-2","TAATCTCGATGTATTA",3,106.33,6,-4.76,1.08,1.5,1.15,0.01,">1 nonsynonymous","P7L S36E F167I",3
"lib1","SARS-CoV-2","TAATCTCGCTCATATA",4,73.65,10.2,-0.57,0.08,2.58,1.03,0,">1 nonsynonymous","T63A S69Y D97A A192H",4
"lib1","SARS-CoV-2","TAATCTCTATGCTTTA",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V T85L",2
"lib1","SARS-CoV-2","TAATCTCTCTCAAATG",2,53.91,10.81,0.04,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATCTCTGGCTTAAT",13,1.99,NA,NA,NA,NA,NA,NA,"stop","G101I R179*",2
"lib1","SARS-CoV-2","TAATCTCTTGTCCTCC",8,26.5,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","R16C F44S R179L L183N S200L",5
"lib1","SARS-CoV-2","TAATCTCTTGTTAACA",2,34.02,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","C6W V11G K56E G83A L95A W106G L122R S139P",8
"lib1","SARS-CoV-2","TAATCTGAAAAACAAG",4,83.36,9.12,-1.65,0.08,2.75,1.13,0,">1 nonsynonymous","I28L G117C",2
"lib1","SARS-CoV-2","TAATCTGAAAAACAGC",6,2.15,NA,NA,NA,NA,NA,NA,"stop","Y35F N64* G117T P177T V182A",5
"lib1","SARS-CoV-2","TAATCTGAATAGTAGC",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S P149C",2
"lib1","SARS-CoV-2","TAATCTGACATACTGA",2,17.73,10.55,-0.21,0.07,2.83,1.09,0,">1 nonsynonymous","G9S A33V D98V",3
"lib1","SARS-CoV-2","TAATCTGACTCGAGCA",1,19.89,10.75,-0.01,0.08,2.88,1.06,0,"1 nonsynonymous","K132E",1
"lib1","SARS-CoV-2","TAATCTGATAAACTTA",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K G83V Y91L W106A",4
"lib1","SARS-CoV-2","TAATCTGCACACAAAT",4,59.84,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9E Y35Q P96Y R127E",4
"lib1","SARS-CoV-2","TAATCTGCGGGAACTG",3,24.13,9.83,-0.93,0.1,2.6,1,0.01,">1 nonsynonymous","V37F K114R Y165R",3
"lib1","SARS-CoV-2","TAATCTGGTCCTAACC",11,34.38,6.57,-4.19,0.2,1.5,1.07,0.01,">1 nonsynonymous","D34V S53C L60P I142Y C158R",5
"lib1","SARS-CoV-2","TAATCTGTAGCGAATA",3,26.05,9.35,-1.41,0.16,1.62,1.04,0.01,">1 nonsynonymous","P7V F99Y",2
"lib1","SARS-CoV-2","TAATCTTAAGAACTCC",8,63.44,9.97,-0.8,0.14,2.04,1.04,0.01,">1 nonsynonymous","A81F D97A",2
"lib1","SARS-CoV-2","TAATCTTAATAACCAC",2,9.75,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","TAATCTTACCATACAA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V N13M P82H",3
"lib1","SARS-CoV-2","TAATCTTAGATAAGAC",3,80.55,10.79,0.02,0.06,2.93,1.04,0,">1 nonsynonymous","Y35W P96G",2
"lib1","SARS-CoV-2","TAATCTTAGGGCGAGC",2,14.83,9.11,-1.65,0.35,1.5,1.12,0.05,">1 nonsynonymous","F8D L95V",2
"lib1","SARS-CoV-2","TAATCTTAGTAACATA",10,2.94,NA,NA,NA,NA,NA,NA,"stop","W106* G117Q",2
"lib1","SARS-CoV-2","TAATCTTCGACAGAGT",1,29.34,9.58,-1.19,0.1,2.97,1.04,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","TAATCTTCGAGGGATA",3,23.43,7.05,-3.72,0.31,1.5,1.14,0.02,">1 nonsynonymous","S113W I138S E141T",3
"lib1","SARS-CoV-2","TAATCTTCTCACATAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S41* G86E G152C",3
"lib1","SARS-CoV-2","TAATCTTTTATTAATA",6,40.44,10.4,-0.36,0.08,2.8,1.07,0,"1 nonsynonymous","P133Q",1
"lib1","SARS-CoV-2","TAATGAAAAATACAGT",3,88.37,10.09,-0.67,0.06,2.63,1.04,0,">1 nonsynonymous","K56V D98Y I104L",3
"lib1","SARS-CoV-2","TAATGAAAACGGGTAA",5,81.98,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","R27L K94Y D98V R124W N171Q",5
"lib1","SARS-CoV-2","TAATGAAACATTAAGC",1,39.01,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R78L D97S Y119T Q144N R179Q",5
"lib1","SARS-CoV-2","TAATGAAACTTAACTG",1,30.61,6,-4.76,1.62,1.5,1.19,0.02,">1 nonsynonymous","G83K L95R V103G N110V Y123V N130Q P177L T201V",8
"lib1","SARS-CoV-2","TAATGAAAGACCCGTA",1,19.68,9.47,-1.29,0.27,1.6,1.04,0.04,">1 nonsynonymous","C49L T100F",2
"lib1","SARS-CoV-2","TAATGAAAGCAAACTC",2,44.5,10.42,-0.34,0.08,2.83,1.05,0,"1 nonsynonymous","S45Y",1
"lib1","SARS-CoV-2","TAATGAAAGCAACAGT",4,45.37,8.88,-1.89,0.15,2.1,1.17,0.01,">1 nonsynonymous","K48P G83N D98F",3
"lib1","SARS-CoV-2","TAATGAAATGACATTC",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127H",1
"lib1","SARS-CoV-2","TAATGAACAAGGTGCG",3,13.08,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6K F44T D98A",3
"lib1","SARS-CoV-2","TAATGAACACCGAATC",7,28.29,8.51,-2.26,0.25,1.5,1,0.02,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","TAATGAACACCTAAAA",3,10.37,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S19L D137H N157H",3
"lib1","SARS-CoV-2","TAATGAACCACGAAAT",8,186.46,9.9,-0.87,0.13,2.26,1.05,0.01,">1 nonsynonymous","K48L C61S G83T",3
"lib1","SARS-CoV-2","TAATGAACGCGATACT",3,75.98,8.64,-2.12,0.08,2.71,1.08,0,"1 nonsynonymous","S113R",1
"lib1","SARS-CoV-2","TAATGAACGTAATATA",5,82.54,9.83,-0.94,0.17,1.81,1.08,0.01,">1 nonsynonymous","A89V Y123L",2
"lib1","SARS-CoV-2","TAATGAACGTGAGGCT",3,30.17,9.77,-1,0.12,2.23,1.05,0.01,">1 nonsynonymous","R27F Y35N S43P F47C N151D",5
"lib1","SARS-CoV-2","TAATGAAGCGGACGAT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","R27T S41A F156E Q168*",4
"lib1","SARS-CoV-2","TAATGAAGCTATAAAT",7,111.41,10.19,-0.57,0.04,2.8,1.03,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","TAATGAAGGAATACAA",1,39.51,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","V37D S45I C49F N64L N92R",5
"lib1","SARS-CoV-2","TAATGAAGGCAAACGG",4,32.59,10.74,-0.03,0.09,2.96,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATGAATAAGATTTA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","P7* K128H I138P",3
"lib1","SARS-CoV-2","TAATGAATAGCCTATA",2,7.14,6,-4.76,2,1.5,1.13,0.06,">1 nonsynonymous","A14F G86K D98C T201M",4
"lib1","SARS-CoV-2","TAATGAATAGGATTAT",5,97.06,8.63,-2.13,0.09,2.58,1.11,0,">1 nonsynonymous","F8L L95V Y119Q S139H",4
"lib1","SARS-CoV-2","TAATGAATGAAACGAA",1,27.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","E10N S113R G152V V181L",4
"lib1","SARS-CoV-2","TAATGACAATGGATAT",4,4.53,NA,NA,NA,NA,NA,NA,"stop","E141I P169*",2
"lib1","SARS-CoV-2","TAATGACACAGCACAA",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A S139G N157R K198L",4
"lib1","SARS-CoV-2","TAATGACAGATTTAAG",3,112.33,7.02,-3.74,0.25,1.5,1.18,0.01,">1 nonsynonymous","S36M N107I Y178N",3
"lib1","SARS-CoV-2","TAATGACCACCCTGAT",4,61.11,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5R S139V G146W G152L",4
"lib1","SARS-CoV-2","TAATGACCTAAGCTTC",5,51.46,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L5E Y21R N64V V103Q L162C",5
"lib1","SARS-CoV-2","TAATGACGATGGGAAA",1,20.47,10.23,-0.53,0.08,2.84,1,0,">1 nonsynonymous","S45L T201P",2
"lib1","SARS-CoV-2","TAATGACGCGACTCAA",4,27.31,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","Y91S L125M F134T E186Y",4
"lib1","SARS-CoV-2","TAATGACGTAGCACAT",4,7.79,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N24H F47M L111P L162V",4
"lib1","SARS-CoV-2","TAATGACTAAATTAAA",1,9.25,6.14,-4.62,1.19,1.5,1.09,0.07,">1 nonsynonymous","I2G P177E",2
"lib1","SARS-CoV-2","TAATGACTGGGACTTA",1,22.01,8.28,-2.49,0.43,1.5,1.01,0.07,">1 nonsynonymous","Y39E L95T F160L",3
"lib1","SARS-CoV-2","TAATGAGAATGTCCGC",6,152.54,8.51,-2.26,0.11,2.54,1.05,0,">1 nonsynonymous","G117S S129V T148K G174W",4
"lib1","SARS-CoV-2","TAATGAGCTTTAAGAT",3,68.69,6.01,-4.75,1.48,1.5,1.27,0.04,">1 nonsynonymous","F99P G146C Y178L",3
"lib1","SARS-CoV-2","TAATGAGGATTCCCTT",3,86.33,10.82,0.05,0.05,2.9,1.04,0,"1 nonsynonymous","K198C",1
"lib1","SARS-CoV-2","TAATGAGGCGAACACA",2,30.95,10.79,0.02,0.05,2.98,1.01,0,">1 nonsynonymous","L5P N151I",2
"lib1","SARS-CoV-2","TAATGAGTACACCTGA",2,14.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T55K R73T G83K N92Q W106L R124L Q168Y G196V",8
"lib1","SARS-CoV-2","TAATGATAGACTTCAT",2,36.34,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G116I C158Y Y165N",3
"lib1","SARS-CoV-2","TAATGATATAATACCT",4,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y D90V Q163W E186L",4
"lib1","SARS-CoV-2","TAATGATATACTCCGG",5,92.72,6,-4.76,1.72,1.5,1.16,0.01,">1 nonsynonymous","N1Y Y35T S129V C150N F156W P197V",6
"lib1","SARS-CoV-2","TAATGATATGGCTTCG",1,22.38,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T46S P82I F99S",3
"lib1","SARS-CoV-2","TAATGATCAAATAAAA",4,25.33,10.02,-0.74,0.05,2.91,1,0,">1 nonsynonymous","V11Y Y39A",2
"lib1","SARS-CoV-2","TAATGATCACACAAGG",6,99.83,9.94,-0.82,0.07,2.77,1,0,">1 nonsynonymous","L60P S129V G152N",3
"lib1","SARS-CoV-2","TAATGATCTAGCTAAG",4,35.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K26R P96L W106H N120G",4
"lib1","SARS-CoV-2","TAATGATGCAAACTTG",10,81.12,10.53,-0.23,0.07,2.94,1,0,">1 nonsynonymous","T3M N40P",2
"lib1","SARS-CoV-2","TAATGATGTTTTGAAG",6,50.36,6,-4.76,1.05,1.5,1.11,0.02,">1 nonsynonymous","A81T Q84K V103P Y119A G155R",5
"lib1","SARS-CoV-2","TAATGATTAGCTCTGG",2,33.12,8.29,-2.47,0.17,2.83,1.07,0.02,">1 nonsynonymous","K87G T170C",2
"lib1","SARS-CoV-2","TAATGCAAATCTCCGA",1,77.92,9.27,-1.5,0.07,2.84,1.14,0,">1 nonsynonymous","Y119I N151M",2
"lib1","SARS-CoV-2","TAATGCAACAAGAGGC",1,100.15,6.04,-4.73,1.2,1.5,1.19,0.03,">1 nonsynonymous","Y91F Y143T G172L",3
"lib1","SARS-CoV-2","TAATGCAAGACAAATA",9,171.29,10.72,-0.04,0.03,2.94,1.03,0,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","TAATGCAAGTTAGCAT",3,131.93,9.88,-0.89,0.04,2.91,1.02,0,">1 nonsynonymous","R16Y G155R G166S",3
"lib1","SARS-CoV-2","TAATGCAATCTTTGTG",6,2.3,NA,NA,NA,NA,NA,NA,"stop","F44T N107L L122M Y165*",4
"lib1","SARS-CoV-2","TAATGCACTATGCAGA",1,25.39,10.03,-0.73,0.15,1.93,1.01,0.01,">1 nonsynonymous","N64V P96M",2
"lib1","SARS-CoV-2","TAATGCAGAAACTCAG",1,12.13,8.18,-2.59,0.18,2.72,1.12,0.02,">1 nonsynonymous","N120R N151S N157K",3
"lib1","SARS-CoV-2","TAATGCAGATTTAAAG",6,64.59,10.8,0.03,0.06,2.89,1.01,0,">1 nonsynonymous","T3N P149K",2
"lib1","SARS-CoV-2","TAATGCAGCGGTCCCG",1,15.1,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I88M A89S L131A",3
"lib1","SARS-CoV-2","TAATGCAGGCCACAAA",12,206.85,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R124L Q176L",2
"lib1","SARS-CoV-2","TAATGCATAAAATGTA",10,289.53,8.57,-2.19,0.08,2.84,1.08,0,"1 nonsynonymous","Q176E",1
"lib1","SARS-CoV-2","TAATGCATAACACCAA",2,3.5,NA,NA,NA,NA,NA,NA,"stop","S36L F62* K128S N157F N171S L188N",6
"lib1","SARS-CoV-2","TAATGCATCCCTAGGG",5,50.17,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V37K D68A I104D",3
"lib1","SARS-CoV-2","TAATGCCCACCGCTAC",1,55.29,10.52,-0.24,0.05,2.95,1,0,">1 nonsynonymous","L122K Q163E E186G",3
"lib1","SARS-CoV-2","TAATGCCCAGACCTAT",1,8.73,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","S36K P54S C150D F167Y G174L",5
"lib1","SARS-CoV-2","TAATGCCCAGGCAGGA",3,46.57,10.11,-0.66,0.09,2.44,1.01,0,">1 nonsynonymous","A14R F62E",2
"lib1","SARS-CoV-2","TAATGCCCCTAGAGCA",4,44,6,-4.76,1.53,1.5,1.17,0.02,">1 nonsynonymous","K56D Q144R N151R F167A",4
"lib1","SARS-CoV-2","TAATGCCTGCCGTTTA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","Y93S S139G V182*",3
"lib1","SARS-CoV-2","TAATGCCTTAGTTGAA",2,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T F17C C31Y S45L A81K N120R",6
"lib1","SARS-CoV-2","TAATGCCTTATTCTGC",7,0.61,NA,NA,NA,NA,NA,NA,"stop","S41* N58R K87P G116K L131S",5
"lib1","SARS-CoV-2","TAATGCCTTGATAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14E S36W A81* G117S E154S",5
"lib1","SARS-CoV-2","TAATGCGACTCCGTAT",3,12.77,7.44,-3.32,0.32,1.5,1.09,0.05,">1 nonsynonymous","S41V N64L N107V",3
"lib1","SARS-CoV-2","TAATGCGAGCTCCACA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A33* S41D G83H",3
"lib1","SARS-CoV-2","TAATGCGAGGAGCTTT",11,57.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39T G86Q N107T T140S G166Y",5
"lib1","SARS-CoV-2","TAATGCGGGTTCATCT",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L N107A E141T V182K",4
"lib1","SARS-CoV-2","TAATGCTAATCTTATT",5,0,NA,NA,NA,NA,NA,NA,"stop","I2Y D34* V52G D59T P149N",5
"lib1","SARS-CoV-2","TAATGCTAGGGTGGTC",5,152.21,10.1,-0.67,0.1,2.6,1.01,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","TAATGCTCAAACATTA",5,21.14,10.68,-0.08,0.11,2.86,1,0,"1 nonsynonymous","N4I",1
"lib1","SARS-CoV-2","TAATGCTCCCGAGCAG",3,8.74,10.25,-0.52,0.16,2.88,1,0.01,">1 nonsynonymous","I2Q D90V",2
"lib1","SARS-CoV-2","TAATGCTGAGATCGTA",3,39.95,10.68,-0.08,0.05,2.95,1.02,0,">1 nonsynonymous","D90Q S139N",2
"lib1","SARS-CoV-2","TAATGCTTAACCAAAG",3,76.92,9.11,-1.65,0.11,2.57,1.08,0.01,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","TAATGCTTAGTATATA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","C61I N120* Q163A",3
"lib1","SARS-CoV-2","TAATGCTTCCTACCAG",1,14.54,6,-4.76,1.59,3,1.15,0.01,">1 nonsynonymous","G9I F47S S108Y",3
"lib1","SARS-CoV-2","TAATGGAAATCGAAAA",2,46.12,10.86,0.1,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATGGAAATGTGCAA",3,97.69,10.69,-0.07,0.03,2.96,1,0,">1 nonsynonymous","I28M L162M T201L",3
"lib1","SARS-CoV-2","TAATGGAAGATTAAAA",5,131.99,10.32,-0.45,0.04,2.86,1.03,0,">1 nonsynonymous","D59N F160L Q168S",3
"lib1","SARS-CoV-2","TAATGGAATTGAAGAA",8,109.25,10.77,0.01,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATGGACACTTACAA",1,21.21,6.52,-4.25,0.33,2.15,1.14,0.01,">1 nonsynonymous","G86R P96H R127F",3
"lib1","SARS-CoV-2","TAATGGACCCCGTGGG",2,70.95,10.37,-0.39,0.04,2.81,1,0,"1 nonsynonymous","D34H",1
"lib1","SARS-CoV-2","TAATGGACCTATACGA",1,12.34,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y21L E141Y C158S",3
"lib1","SARS-CoV-2","TAATGGACGAATGGGA",5,42.71,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","R73P P82C V173L R179V",4
"lib1","SARS-CoV-2","TAATGGACTTACCAGA",2,33.68,9.7,-1.07,0.2,1.82,1.16,0.02,">1 nonsynonymous","G9L Y35F F62L Y121N K132I",5
"lib1","SARS-CoV-2","TAATGGATCAAAATAG",14,1.5,NA,NA,NA,NA,NA,NA,"stop","F8A Y50* L122P",3
"lib1","SARS-CoV-2","TAATGGCAGACATAAG",6,66.68,10.86,0.09,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATGGCTAATACAAG",2,80.38,9.92,-0.84,0.1,1.95,1.11,0,">1 nonsynonymous","V11L G83I",2
"lib1","SARS-CoV-2","TAATGGCTGCATTAAC",3,59.77,10.74,-0.02,0.05,2.85,1.07,0,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","TAATGGGATTGTTAAA",1,19.44,9.82,-0.95,0.2,1.95,1.09,0.02,">1 nonsynonymous","G9K R16E A105V S184A",4
"lib1","SARS-CoV-2","TAATGGGGCCAACTGG",5,38.33,9.39,-1.37,0.13,2.85,1.16,0.01,"1 nonsynonymous","G166C",1
"lib1","SARS-CoV-2","TAATGGGGGCATGGGT",8,139.22,7.32,-3.44,0.22,1.5,1.14,0.01,"1 nonsynonymous","C150Y",1
"lib1","SARS-CoV-2","TAATGGGTGAATCACA",5,0.42,NA,NA,NA,NA,NA,NA,"stop","W23* P82* G146F F160A",4
"lib1","SARS-CoV-2","TAATGGGTTAATGCAA",2,37.73,10.73,-0.03,0.07,2.94,1.05,0,">1 nonsynonymous","A33W D59K T201M",3
"lib1","SARS-CoV-2","TAATGGTCAGAAGCCA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106K K128T V181A",3
"lib1","SARS-CoV-2","TAATGGTCCAAACACC",1,5.68,10.3,-0.47,0.31,2.46,1,0.04,">1 nonsynonymous","L60N E186I",2
"lib1","SARS-CoV-2","TAATGGTGTTATAATA",6,114.62,9.6,-1.16,0.11,1.83,1.13,0,">1 nonsynonymous","L38M P133L",2
"lib1","SARS-CoV-2","TAATGGTTTTGACACG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","C49N Y50*",2
"lib1","SARS-CoV-2","TAATGTAACTTTCCCT",4,63.48,10.73,-0.04,0.07,2.86,1.12,0,"1 nonsynonymous","S43R",1
"lib1","SARS-CoV-2","TAATGTAAGAGAAAGC",1,0.43,NA,NA,NA,NA,NA,NA,"stop","K132C N157S L187*",3
"lib1","SARS-CoV-2","TAATGTACAGATGACG",2,25.52,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","S69K G86Y P96Y",3
"lib1","SARS-CoV-2","TAATGTACTCGCTTTT",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I S113L S147P C158V",4
"lib1","SARS-CoV-2","TAATGTATAATAAATA",13,75.22,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","E10L A22G L60V G83Y V103K S113K G166P",7
"lib1","SARS-CoV-2","TAATGTATTCCCAAAA",3,130.13,10.28,-0.49,0.05,2.89,1.02,0,">1 nonsynonymous","I2C A33L N120G E154I",4
"lib1","SARS-CoV-2","TAATGTCAAGTGAAGC",1,48.33,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A18T N40V V52D Y123L",4
"lib1","SARS-CoV-2","TAATGTCATGAACTGA",1,28.94,8.39,-2.38,0.28,1.52,1.08,0.03,">1 nonsynonymous","S41K F167L E186D",3
"lib1","SARS-CoV-2","TAATGTCATGAATCTT",5,85.89,9.55,-1.22,0.06,2.76,1.12,0,">1 nonsynonymous","G116M L125V",2
"lib1","SARS-CoV-2","TAATGTCCATCCGACA",1,14.31,6,-4.76,2,3,1.11,0,">1 nonsynonymous","E10W V32A Y39D V65T V71K I88S",6
"lib1","SARS-CoV-2","TAATGTCCGGAGAGTA",7,2.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37Y",1
"lib1","SARS-CoV-2","TAATGTCCTTGGGCCA",4,12.68,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D75E F99S Q168S",3
"lib1","SARS-CoV-2","TAATGTCGAATTTGGG",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L L60G",2
"lib1","SARS-CoV-2","TAATGTCGGCCTTTAT",1,7.86,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","C6L T55L A105D",3
"lib1","SARS-CoV-2","TAATGTCGTAAAACCA",1,6.23,9.64,-1.12,0.31,1.68,1.11,0.04,"1 nonsynonymous","D137F",1
"lib1","SARS-CoV-2","TAATGTCTAACTCATT",3,12.28,8.91,-1.86,0.17,1.75,1.06,0.02,">1 nonsynonymous","S36K P96V",2
"lib1","SARS-CoV-2","TAATGTCTAATAATTT",5,21.28,7.87,-2.9,0.23,1.5,1.09,0.02,">1 nonsynonymous","N13H L57T Y119S",3
"lib1","SARS-CoV-2","TAATGTCTCAAGAACT",2,7.49,9.18,-1.59,0.36,1.94,1.1,0.05,">1 nonsynonymous","A33S R127S",2
"lib1","SARS-CoV-2","TAATGTCTGTATGTGG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","I80L D97L V103* G172T",4
"lib1","SARS-CoV-2","TAATGTCTTAAAATAA",4,44.07,6.1,-4.67,1.08,1.5,1.19,0.03,">1 nonsynonymous","R16A Y21F T46V S53R I88F",5
"lib1","SARS-CoV-2","TAATGTGAAACGTTCG",8,33.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W C49V G146A",3
"lib1","SARS-CoV-2","TAATGTGAAGTATAAA",3,57.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10L N40W E76T",3
"lib1","SARS-CoV-2","TAATGTGACTTGAGAC",5,0.16,NA,NA,NA,NA,NA,NA,"stop","D90F E141*",2
"lib1","SARS-CoV-2","TAATGTGCCTTAAGAA",2,23.63,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S45Y D90C V103D Y165A",4
"lib1","SARS-CoV-2","TAATGTGGATCAGTGC",2,1.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","TAATGTGGATGTTATG",6,25.76,8.95,-1.81,0.32,1.5,1,0.05,">1 nonsynonymous","N1D D34A V52R",3
"lib1","SARS-CoV-2","TAATGTGTTCCCAGCA",1,8.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86K R127A V153L",3
"lib1","SARS-CoV-2","TAATGTTAATGTCTCA",4,17.87,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V11F S29L A81D C102R K128L L183R",6
"lib1","SARS-CoV-2","TAATGTTAGCCGCTCT",5,34.01,8.04,-2.72,0.23,1.54,1.19,0.02,">1 nonsynonymous","A33R Y121L P133S",3
"lib1","SARS-CoV-2","TAATGTTATCGACGAA",9,3.56,NA,NA,NA,NA,NA,NA,"stop","T46D G83* S139R F160C",4
"lib1","SARS-CoV-2","TAATGTTATGGTACAG",8,125.41,8.79,-1.97,0.14,1.98,1.16,0.01,">1 nonsynonymous","A67I N120T E135H",3
"lib1","SARS-CoV-2","TAATGTTCAAATTAGG",1,9.33,10.35,-0.42,0.07,2.9,1.01,0,">1 nonsynonymous","L5Y F44P",2
"lib1","SARS-CoV-2","TAATGTTGATAGAAAA",2,25.59,9.89,-0.88,0.11,2.15,1.04,0.01,">1 nonsynonymous","W106Y S129P",2
"lib1","SARS-CoV-2","TAATGTTTAAAGGACT",3,37.97,8.2,-2.57,0.2,1.55,1.16,0.01,">1 nonsynonymous","T100N L111N K114V T148R L162M S184W",6
"lib1","SARS-CoV-2","TAATGTTTCTGTCAAG",8,60.99,9.63,-1.14,0.04,2.85,1.05,0,">1 nonsynonymous","S43D F62Q T100Q F156L",4
"lib1","SARS-CoV-2","TAATGTTTGGCCGTCA",1,18.38,9.82,-0.95,0.13,2.01,1.08,0.01,"1 nonsynonymous","V11D",1
"lib1","SARS-CoV-2","TAATTAAAAAACTAGT",5,77.47,9.85,-0.91,0.14,1.88,1.06,0.01,">1 nonsynonymous","T15S S29K T100H N109I E141K",5
"lib1","SARS-CoV-2","TAATTAAAACAAACAG",5,165.41,9.37,-1.39,0.05,2.84,1.08,0,"1 nonsynonymous","Y119I",1
"lib1","SARS-CoV-2","TAATTAAAACGCAACT",4,5.4,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A42L Y66K L131F Y159F L187V",5
"lib1","SARS-CoV-2","TAATTAAAAGTTGATG",6,65.12,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V11L S36K D59I D90G R124L",5
"lib1","SARS-CoV-2","TAATTAAACTGAATGG",2,22.61,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K26E D90I D97W F160C",4
"lib1","SARS-CoV-2","TAATTAAAGGCCGCAT",9,14.82,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P82T C158F L183H",3
"lib1","SARS-CoV-2","TAATTAAATAACATCT",12,200.73,10.09,-0.68,0.05,2.9,1,0,">1 nonsynonymous","L122G I142W",2
"lib1","SARS-CoV-2","TAATTAAATAATGAAA",2,22.39,10.46,-0.31,0.07,2.9,1.05,0,">1 nonsynonymous","S129N G174P",2
"lib1","SARS-CoV-2","TAATTAAATACACTAT",2,12.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15Y S41P G83F Q176R",4
"lib1","SARS-CoV-2","TAATTAAATGGTCTCA",1,16.9,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C102D L183I",2
"lib1","SARS-CoV-2","TAATTAAATTCCCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41M S139*",2
"lib1","SARS-CoV-2","TAATTAACACAAAGAA",5,65.96,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37T V77E S113L",3
"lib1","SARS-CoV-2","TAATTAACTAGAGCCG",1,15.17,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","I2C S45N G86T D97S",4
"lib1","SARS-CoV-2","TAATTAACTTAATTAC",4,10.02,9.85,-0.91,0.24,1.71,1.02,0.03,">1 nonsynonymous","N13T Y21S",2
"lib1","SARS-CoV-2","TAATTAAGATTTAGAA",11,72.96,10.88,0.12,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTAAGCGATGAAA",9,25.9,6.91,-3.86,0.31,1.5,1.16,0.02,">1 nonsynonymous","F99V Q144V",2
"lib1","SARS-CoV-2","TAATTAAGCTATATAT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T55* G86* G117A F126L",4
"lib1","SARS-CoV-2","TAATTAAGGGATAGGA",4,5.38,NA,NA,NA,NA,NA,NA,"stop","N24P F99* W106S F126L",4
"lib1","SARS-CoV-2","TAATTAAGTATACAAA",1,71.57,7.18,-3.59,0.15,1.5,1.06,0.01,">1 nonsynonymous","K128S Y143N P169Y",3
"lib1","SARS-CoV-2","TAATTAAGTATCTCCT",2,50.91,8.25,-2.52,0.18,2.59,1.18,0.01,">1 nonsynonymous","L122K C158L",2
"lib1","SARS-CoV-2","TAATTAAGTGAAAATC",1,0.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168L",1
"lib1","SARS-CoV-2","TAATTAATAATCATAG",4,53.48,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S19Q I28T L57V",3
"lib1","SARS-CoV-2","TAATTAATAATCTGCA",3,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I P96F",2
"lib1","SARS-CoV-2","TAATTAATACTTATCT",2,16.93,10.51,-0.25,0.11,2.77,1.11,0.01,">1 nonsynonymous","S36A N64S F160S",3
"lib1","SARS-CoV-2","TAATTAATCATGCTTT",3,80.51,10.49,-0.27,0.06,2.88,1,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","TAATTAATGAAGAACT",3,49.94,10.18,-0.58,0.08,2.73,1.03,0,">1 nonsynonymous","F134S E154G",2
"lib1","SARS-CoV-2","TAATTAATTAAGATAA",8,202.79,10.13,-0.64,0.08,2.46,1.01,0,">1 nonsynonymous","A42H I88M",2
"lib1","SARS-CoV-2","TAATTACAATTCTACA",4,0.68,NA,NA,NA,NA,NA,NA,"stop","N4G C49L D68* A81K D90C G116L Y143S",7
"lib1","SARS-CoV-2","TAATTACACACTCTTA",3,83.19,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I28M C49L Q84R T100I W106C E135C",6
"lib1","SARS-CoV-2","TAATTACACCAAATGC",9,106.67,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","R25M R127P",2
"lib1","SARS-CoV-2","TAATTACACGCGTAAT",2,96.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9R P177Q",2
"lib1","SARS-CoV-2","TAATTACAGTAGAAAT",1,7.91,10.85,0.08,0.13,3,1.02,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","TAATTACATTAAAATG",5,83.28,10.21,-0.56,0.06,2.88,1.02,0,">1 nonsynonymous","S41A I142H",2
"lib1","SARS-CoV-2","TAATTACCAAAATTAG",6,208.1,9.93,-0.84,0.05,2.86,1.04,0,">1 nonsynonymous","T55N S129G T170F",3
"lib1","SARS-CoV-2","TAATTACCAATGGTTG",2,12.31,6,-4.76,1.12,1.94,1.06,0.01,">1 nonsynonymous","V11I S45V S69G I80Q D112F",5
"lib1","SARS-CoV-2","TAATTACCGAAACATT",11,106.91,10.81,0.05,0.08,2.92,1.04,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","TAATTACCGTAGTGAC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","T46* Y119*",2
"lib1","SARS-CoV-2","TAATTACGTATGTCTA",1,35.64,9.13,-1.64,0.12,2.28,1.12,0.01,">1 nonsynonymous","A14Y Y35W D97N G174T",4
"lib1","SARS-CoV-2","TAATTACGTTAGCCGC",2,99.46,10.79,0.02,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTACTAGTGCTAG",7,4.26,NA,NA,NA,NA,NA,NA,"stop","S29* G83N N92W",3
"lib1","SARS-CoV-2","TAATTACTATCATATT",5,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M N40V K128Y Y175I",4
"lib1","SARS-CoV-2","TAATTACTCATATTAC",5,11.39,9.19,-1.58,0.38,1.52,1.25,0.05,">1 nonsynonymous","N64W L95T",2
"lib1","SARS-CoV-2","TAATTACTCTAAAGTG",5,59.21,10.68,-0.08,0.03,2.91,1.04,0,"1 nonsynonymous","I28V",1
"lib1","SARS-CoV-2","TAATTACTTAGAAAAA",7,29.46,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S45L F99N V115E P161F",4
"lib1","SARS-CoV-2","TAATTAGAATTTCTAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","Y39R D68L E76* D112L N151L",5
"lib1","SARS-CoV-2","TAATTAGATGTAAATA",4,47.71,7.99,-2.77,0.38,1.5,1,0.05,">1 nonsynonymous","F44E D137V",2
"lib1","SARS-CoV-2","TAATTAGCACGATCCG",4,130.24,10.71,-0.05,0.08,2.86,1.06,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","TAATTAGCTACCCACT",6,81.5,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V37M F44N C61R R73L G155L",5
"lib1","SARS-CoV-2","TAATTAGCTTTTAATT",9,169.58,10.7,-0.06,0.07,2.88,1.06,0,"1 nonsynonymous","S43F",1
"lib1","SARS-CoV-2","TAATTAGGCATAAGTA",3,57.98,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N107R C150P",2
"lib1","SARS-CoV-2","TAATTAGTAATAAATG",2,7.25,10.82,0.05,0.26,2.67,1.21,0.02,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TAATTAGTGACATAGC",2,8.94,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y50R E154F G174Q",3
"lib1","SARS-CoV-2","TAATTAGTGGATTTAG",1,7.53,10.88,0.11,0.12,2.99,1.04,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TAATTAGTGTGGGAAG",5,38.51,9.76,-1.01,0.17,1.76,1.04,0.01,">1 nonsynonymous","F12D P197E",2
"lib1","SARS-CoV-2","TAATTAGTTCTAGAGC",3,27.33,6.78,-3.99,0.6,1.5,1.08,0.07,">1 nonsynonymous","I28Q C61Y D68V T85M T100V",5
"lib1","SARS-CoV-2","TAATTATAACATTCTT",4,9.72,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L125R I142M V182R K199T",4
"lib1","SARS-CoV-2","TAATTATAATACCATC",1,9.91,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","F8R Y178E",2
"lib1","SARS-CoV-2","TAATTATACATGGGGA",1,4.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","TAATTATATAGTGAAC",2,7.84,9.61,-1.16,0.26,1.96,1.1,0.03,">1 nonsynonymous","S53L L60Q D97N F134V",4
"lib1","SARS-CoV-2","TAATTATCAAAACTTA",3,50.27,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G83N Y91C C158R",3
"lib1","SARS-CoV-2","TAATTATCCCCACACG",1,12.19,10.65,-0.12,0.2,2.92,1,0.01,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","TAATTATGATAAAAGA",3,27.81,10.72,-0.04,0.08,2.88,1.04,0,">1 nonsynonymous","Y39A P149S",2
"lib1","SARS-CoV-2","TAATTATGCAGCGTCC",7,178.87,10.73,-0.03,0.06,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTATTAGATAACC",3,78.99,10.72,-0.04,0.05,2.87,1.07,0,">1 nonsynonymous","D59R N64T N109K",3
"lib1","SARS-CoV-2","TAATTATTCCATTCCG",7,64.67,10.21,-0.55,0.1,2.64,1,0,">1 nonsynonymous","F62S D90C",2
"lib1","SARS-CoV-2","TAATTATTGACACACA",12,141,10.74,-0.03,0.03,2.94,1.04,0,">1 nonsynonymous","T148G T201G",2
"lib1","SARS-CoV-2","TAATTATTGGAAAAAA",1,18.41,10.08,-0.69,0.14,1.93,1.04,0.01,">1 nonsynonymous","A14P T63A Q163G",3
"lib1","SARS-CoV-2","TAATTATTTAGATGTA",1,53.87,9.8,-0.96,0.11,2.59,1.06,0,">1 nonsynonymous","N1A P7T G83F N107P T148D",5
"lib1","SARS-CoV-2","TAATTCAAAGCCACGA",3,6.27,6,-4.76,2,1.5,1.07,0,"1 nonsynonymous","V103Q",1
"lib1","SARS-CoV-2","TAATTCAACCCTCGGC",2,33.12,6,-4.76,2,3,1.15,0,">1 nonsynonymous","T15N F99L T140D V173S",4
"lib1","SARS-CoV-2","TAATTCAACTCAAAAG",9,3.24,NA,NA,NA,NA,NA,NA,"stop","G9K W23* I72K N110A",4
"lib1","SARS-CoV-2","TAATTCAACTGTAAAA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I S129V T148L G196S",4
"lib1","SARS-CoV-2","TAATTCAAGAGTAGCT",2,77.52,10.67,-0.1,0.06,2.94,1.05,0,">1 nonsynonymous","T55S P149W",2
"lib1","SARS-CoV-2","TAATTCAAGCAAAACT",1,31.51,6.46,-4.31,0.49,1.5,1.09,0.03,">1 nonsynonymous","G86F N120F H189F",3
"lib1","SARS-CoV-2","TAATTCAGGCACAATT",6,53.25,8.79,-1.97,0.11,1.79,1.11,0,">1 nonsynonymous","T15Y Y121A",2
"lib1","SARS-CoV-2","TAATTCAGGCGTGTGG",4,76.27,6,-4.76,1.36,1.5,1.16,0.01,">1 nonsynonymous","A18K P96L D112G",3
"lib1","SARS-CoV-2","TAATTCAGTAAATTCT",2,21.19,8,-2.76,0.26,1.82,1.09,0.03,">1 nonsynonymous","K48M D59E Q176W",3
"lib1","SARS-CoV-2","TAATTCATGATTCCTC",8,117.97,8.36,-2.4,0.18,1.91,1.12,0.01,">1 nonsynonymous","S45A Y119P R136W",3
"lib1","SARS-CoV-2","TAATTCATTATTGAAC",8,59,6.28,-4.49,0.38,1.5,1.16,0.01,">1 nonsynonymous","F17Y G86Y G117D Y123G T170V",5
"lib1","SARS-CoV-2","TAATTCATTTCGAAAC",5,76.5,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K94D E135D",2
"lib1","SARS-CoV-2","TAATTCCAAATCAAAA",13,372.93,8.87,-1.89,0.07,2.77,1.09,0,">1 nonsynonymous","V32T L162V T170L",3
"lib1","SARS-CoV-2","TAATTCCATGATCGAG",1,43.23,9.57,-1.19,0.2,1.97,1.08,0.02,">1 nonsynonymous","V37H S139L G152M",3
"lib1","SARS-CoV-2","TAATTCCCCTAATAAA",9,170.84,10.77,0,0.05,2.91,1.05,0,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","TAATTCCGAGATAACG",2,33.01,10.45,-0.31,0.05,2.97,1.01,0,">1 nonsynonymous","S43E E141Q F160L",3
"lib1","SARS-CoV-2","TAATTCCGATCCCCCC",5,54.33,8.74,-2.03,0.19,1.5,1.13,0.02,">1 nonsynonymous","S41V N92A",2
"lib1","SARS-CoV-2","TAATTCCGCAGTGCAT",5,36.86,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S19W E141K C158V",3
"lib1","SARS-CoV-2","TAATTCCTACGAGGCC",7,98.35,8.43,-2.33,0.15,1.8,1.15,0.01,">1 nonsynonymous","S139P V173K",2
"lib1","SARS-CoV-2","TAATTCCTCAATATTA",3,1.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAATTCGAACAAAACA",1,11.15,10.81,0.04,0.1,2.76,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATTCGCAACCAGGG",1,13.09,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A81L D98E G117P I142K",4
"lib1","SARS-CoV-2","TAATTCGGACGATAAC",4,18.73,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A67F A145R V180K",3
"lib1","SARS-CoV-2","TAATTCGGATTGCGTA",2,40.4,6,-4.76,1.8,1.5,1.19,0.02,">1 nonsynonymous","V20Y T46M G152L",3
"lib1","SARS-CoV-2","TAATTCGGGTCACTTG",4,38.66,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","C102F L111Y Y143S G152V T201V",5
"lib1","SARS-CoV-2","TAATTCGGTTTATCAG",4,0,NA,NA,NA,NA,NA,NA,"stop","Y39E Y93* S113I R179P",4
"lib1","SARS-CoV-2","TAATTCGTGACTTTCT",1,12.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","P7G G86V A105D",3
"lib1","SARS-CoV-2","TAATTCGTTATTCGAA",3,18.01,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V103Q F156L",2
"lib1","SARS-CoV-2","TAATTCGTTCTTTAGT",6,85.67,10.04,-0.72,0.11,2.63,1.11,0,">1 nonsynonymous","Y123S P149R N151L",3
"lib1","SARS-CoV-2","TAATTCTAAACATTAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q F126L",2
"lib1","SARS-CoV-2","TAATTCTAGCACTAGA",7,44.65,8.51,-2.26,0.2,1.62,1.15,0.02,">1 nonsynonymous","C6S F12E N110Q",3
"lib1","SARS-CoV-2","TAATTCTAGTACTGAA",1,1.18,NA,NA,NA,NA,NA,NA,"stop","L5* L57T T85E L95P W106S R136Q C158K",7
"lib1","SARS-CoV-2","TAATTCTCGAAATTCC",3,42.88,10.57,-0.19,0.1,2.74,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTCTGCTGGCCGT",3,146.24,10.77,0.01,0.06,2.88,1.08,0,">1 nonsynonymous","T55D G152M Y175W",3
"lib1","SARS-CoV-2","TAATTCTGCTGGTTCA",1,4.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92V",1
"lib1","SARS-CoV-2","TAATTCTGGATATGTA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","C49I V71C I88V G174*",4
"lib1","SARS-CoV-2","TAATTCTTATCAAGGG",1,109.85,10.21,-0.56,0.05,2.84,1.01,0,">1 nonsynonymous","A89P K132Y E141D",3
"lib1","SARS-CoV-2","TAATTCTTCCCTTGCC",3,35.18,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","W23Q G83R D97R G196W",4
"lib1","SARS-CoV-2","TAATTCTTTACTTCAA",12,192.13,10.49,-0.28,0.04,2.88,1.04,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","TAATTGAAATCTTCGC",2,23.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F A105V",2
"lib1","SARS-CoV-2","TAATTGAAGGCAGAGT",5,57.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86S N109D F126C E135S G174S",5
"lib1","SARS-CoV-2","TAATTGACAACTATAC",7,3.1,NA,NA,NA,NA,NA,NA,"stop","I2S G9K G51*",3
"lib1","SARS-CoV-2","TAATTGACAATACGGG",2,0.76,NA,NA,NA,NA,NA,NA,"stop","G9* R16Y S45W W106L",4
"lib1","SARS-CoV-2","TAATTGACACAATCGA",5,50.92,10.79,0.02,0.03,2.92,1.07,0,"1 nonsynonymous","P149K",1
"lib1","SARS-CoV-2","TAATTGACCCATGTGA",2,10.9,10.04,-0.72,0.13,2.13,1.02,0.01,">1 nonsynonymous","L38T C61V",2
"lib1","SARS-CoV-2","TAATTGACCTCATACT",1,68.07,8.46,-2.3,0.12,2.47,1.07,0.01,"1 nonsynonymous","Y175L",1
"lib1","SARS-CoV-2","TAATTGACTAACAAAT",3,49.54,6.38,-4.38,0.53,1.5,1.2,0.02,">1 nonsynonymous","V11K F44N T170Q T201A",4
"lib1","SARS-CoV-2","TAATTGAGACGCTCGC",6,33.2,10.48,-0.28,0.08,2.85,1.08,0,">1 nonsynonymous","A33W N58Y",2
"lib1","SARS-CoV-2","TAATTGAGTTAAATAA",6,82,10.63,-0.14,0.07,2.9,1.04,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","TAATTGATCCCTACCT",7,70.71,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D68G D90W K114R T201E",4
"lib1","SARS-CoV-2","TAATTGATCTGATTCT",2,1.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37P",1
"lib1","SARS-CoV-2","TAATTGATGAAACGGG",8,127.31,9.96,-0.81,0.09,2.15,1.02,0,">1 nonsynonymous","S36Y I104T",2
"lib1","SARS-CoV-2","TAATTGATGGCACAAA",1,24.11,10.78,0.02,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATTGCAAGGCCAAT",2,14.78,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G86T L95Y Q168P T201N",4
"lib1","SARS-CoV-2","TAATTGCATAATAATT",14,161.57,10.78,0.02,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTGCCAGTTAGAT",1,14.86,6.69,-4.07,0.6,1.5,1.16,0.04,">1 nonsynonymous","L5G G86L T100F G152L P161L H189R",6
"lib1","SARS-CoV-2","TAATTGCCCAGAAACA",4,56.55,10.72,-0.05,0.04,2.88,1.06,0,"1 nonsynonymous","G83H",1
"lib1","SARS-CoV-2","TAATTGCCCCCAGTGG",6,119.72,10.82,0.05,0.07,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TAATTGCCTGCCAATA",8,136.58,9.14,-1.63,0.05,2.85,1.14,0,">1 nonsynonymous","A22L K87E N130K Q163R",4
"lib1","SARS-CoV-2","TAATTGCGTAATTTGT",9,62.77,10.04,-0.73,0.04,2.91,1.03,0,">1 nonsynonymous","S36W G116F",2
"lib1","SARS-CoV-2","TAATTGCTTAAACAGG",4,55.32,9.69,-1.08,0.13,1.92,1.09,0,">1 nonsynonymous","N1Y A67C D98C",3
"lib1","SARS-CoV-2","TAATTGCTTAAGATTG",2,6.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9D S45F N58A F167V",4
"lib1","SARS-CoV-2","TAATTGGATCAGTCTA",3,18.85,10.13,-0.63,0.17,2.67,1.03,0.01,"1 nonsynonymous","Y21T",1
"lib1","SARS-CoV-2","TAATTGGCAAAGTACT",1,0.94,NA,NA,NA,NA,NA,NA,"stop","A22E C158*",2
"lib1","SARS-CoV-2","TAATTGGCCCTTATTC",2,22.81,9.41,-1.35,0.14,2.68,1.13,0.01,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","TAATTGGCGATTTGGC",1,34.58,10.73,-0.04,0.04,2.96,1.03,0,"1 nonsynonymous","A81E",1
"lib1","SARS-CoV-2","TAATTGGGATCAAAGA",1,49.98,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y66P G101P I138S",3
"lib1","SARS-CoV-2","TAATTGGTACTATATC",3,7.97,6.27,-4.5,0.87,3,1.36,0.03,">1 nonsynonymous","N4G C49Y N109C E154H",4
"lib1","SARS-CoV-2","TAATTGGTCTCACAAG",2,86.47,10.05,-0.72,0.07,2.62,1.01,0,">1 nonsynonymous","G9D S29D N40R C61V N107A",5
"lib1","SARS-CoV-2","TAATTGGTTGAACCTA",13,171.08,10.57,-0.19,0.04,2.94,1.03,0,">1 nonsynonymous","G9V N151K",2
"lib1","SARS-CoV-2","TAATTGTAAAATACGA",10,154.2,9.93,-0.84,0.04,2.88,1.07,0,">1 nonsynonymous","V37L K114G S129Q",3
"lib1","SARS-CoV-2","TAATTGTAACGGTCCA",1,18.35,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5S A105V Y175G",3
"lib1","SARS-CoV-2","TAATTGTAAGACAGCA",3,81.68,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N30I V37L F44I R124P S200T",5
"lib1","SARS-CoV-2","TAATTGTACAAAAACC",1,77.42,10.78,0.02,0.06,2.89,1.06,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","TAATTGTGAATCAGAT",8,59.09,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38Q K56I A81G Y93F Y175A",5
"lib1","SARS-CoV-2","TAATTGTTCCTTTAGT",2,2.29,NA,NA,NA,NA,NA,NA,"stop","C6L L38Y I88* Y121E S147* T201*",6
"lib1","SARS-CoV-2","TAATTGTTTGACCCTA",7,146.26,10.81,0.05,0.07,2.91,1.03,0,"1 nonsynonymous","Y39Q",1
"lib1","SARS-CoV-2","TAATTTAAAATAAATC",2,10.51,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G9H D75R L183H",3
"lib1","SARS-CoV-2","TAATTTAACAATGTGT",3,1.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAATTTAATCTTAAAA",8,27.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N G86V G101D G117L",4
"lib1","SARS-CoV-2","TAATTTACAAGAAACA",6,2.67,NA,NA,NA,NA,NA,NA,"stop","Y91S F99* P169F T201Q",4
"lib1","SARS-CoV-2","TAATTTACCAAAAAAC",1,20.41,10.4,-0.36,0.14,2.88,1.15,0.01,"1 nonsynonymous","G152T",1
"lib1","SARS-CoV-2","TAATTTACCACTTCCA",1,26.22,6.42,-4.34,0.25,1.93,1.16,0.01,">1 nonsynonymous","E10L F44N Y143I",3
"lib1","SARS-CoV-2","TAATTTAGAAAATAAG",3,5.93,NA,NA,NA,NA,NA,NA,"stop","A22* G83F",2
"lib1","SARS-CoV-2","TAATTTAGAACCACAA",4,24.87,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","D34E I72F N120T F185T",4
"lib1","SARS-CoV-2","TAATTTAGAGTAGCTG",1,19.56,10.84,0.08,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTTAGATGATCTA",3,38.57,6,-4.76,2,1.68,1.21,0.01,">1 nonsynonymous","T46S F62M D68G G166I",4
"lib1","SARS-CoV-2","TAATTTAGCTCTACAC",3,33.51,9.47,-1.29,0.12,1.7,1.15,0.01,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","TAATTTAGCTGTAAGC",7,141.05,6,-4.76,0.93,1.5,1.15,0.01,">1 nonsynonymous","F12W G51P S139A G155S",4
"lib1","SARS-CoV-2","TAATTTAGGCATTACA",5,63.92,10.68,-0.09,0.07,2.84,1.12,0,"1 nonsynonymous","I28L",1
"lib1","SARS-CoV-2","TAATTTATAAATGCAT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","V20M A42N C150* T170Y",4
"lib1","SARS-CoV-2","TAATTTATAATAAGTA",5,2.82,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib1","SARS-CoV-2","TAATTTATAATCCACT",4,16.13,10.29,-0.48,0.18,2.8,1.07,0.02,">1 nonsynonymous","K56Y L111M Q163L",3
"lib1","SARS-CoV-2","TAATTTATAATCTGCG",5,75.02,6.28,-4.49,0.57,1.5,1.15,0.01,">1 nonsynonymous","T85N S108P C150G",3
"lib1","SARS-CoV-2","TAATTTATACGGTAGT",1,24.5,8.21,-2.55,0.11,2.27,1.11,0,">1 nonsynonymous","S41F N58T Q176S",3
"lib1","SARS-CoV-2","TAATTTATAGCTACCA",4,30.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6V L60H V77K K128M",4
"lib1","SARS-CoV-2","TAATTTATCGCCGGGC",6,63.58,10.73,-0.03,0.09,2.87,1.08,0,">1 nonsynonymous","S43H T100N",2
"lib1","SARS-CoV-2","TAATTTATCGTCCTTC",2,44.57,6.3,-4.46,0.55,1.5,1.12,0.02,">1 nonsynonymous","T55D V77W N107Q Y119A S129T R179F",6
"lib1","SARS-CoV-2","TAATTTATTTACATGT",1,31.16,10.43,-0.34,0.11,2.86,1.12,0.01,"1 nonsynonymous","T46N",1
"lib1","SARS-CoV-2","TAATTTCAAAGTCATA",3,18.6,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L38D D137R E154L Y175M",4
"lib1","SARS-CoV-2","TAATTTCAACCCAACT",1,5.46,10.51,-0.25,0.1,2.99,1,0,">1 nonsynonymous","N4Y C61Y L188M H189Q",4
"lib1","SARS-CoV-2","TAATTTCAATAGTAAA",2,14.25,9.43,-1.34,0.22,2.02,1.13,0.02,">1 nonsynonymous","L60N Y121N G196R",3
"lib1","SARS-CoV-2","TAATTTCACACGTGGT",4,95.59,10.66,-0.1,0.05,2.95,1,0,"1 nonsynonymous","E186R",1
"lib1","SARS-CoV-2","TAATTTCCACCCACTA",1,14.94,6,-4.76,2,3,1.09,0,">1 nonsynonymous","N40A I88S N118F",3
"lib1","SARS-CoV-2","TAATTTCCCATAATGC",5,53.67,7.17,-3.6,0.31,1.5,1.15,0.03,"1 nonsynonymous","Y123D",1
"lib1","SARS-CoV-2","TAATTTCCTATACCTG",3,0.5,NA,NA,NA,NA,NA,NA,"stop","I2C R27K T55H D112E K128A C150L E154*",7
"lib1","SARS-CoV-2","TAATTTCCTTCATTAC",1,27.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V E76K N120M",3
"lib1","SARS-CoV-2","TAATTTCTAAAATCGA",6,79.78,6,-4.76,1.84,1.5,1.15,0.03,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","TAATTTCTAATAGATA",2,16.75,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I104E F134G",2
"lib1","SARS-CoV-2","TAATTTCTACATCCCT",3,20.62,6.16,-4.61,0.9,1.5,1.21,0.03,">1 nonsynonymous","I2T L57S F99S N130R E141Q",5
"lib1","SARS-CoV-2","TAATTTCTACGCTAGT",6,51.44,8.67,-2.09,0.37,1.5,1,0.06,">1 nonsynonymous","C61G S108I",2
"lib1","SARS-CoV-2","TAATTTCTCTGAACGA",6,26.4,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3M C49F D90V C150V",4
"lib1","SARS-CoV-2","TAATTTGAGGTTAGCT",1,24.62,10.08,-0.69,0.08,2.73,1.03,0,">1 nonsynonymous","K26V D34T",2
"lib1","SARS-CoV-2","TAATTTGCCGGATGCC",3,1.08,NA,NA,NA,NA,NA,NA,"stop","Q84* I104R",2
"lib1","SARS-CoV-2","TAATTTGCGTAACAAA",1,27.89,9.49,-1.27,0.19,1.7,1.19,0.01,">1 nonsynonymous","L38S I104M",2
"lib1","SARS-CoV-2","TAATTTGTAGCGATTT",2,5.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A89H I104D P133C G196T",5
"lib1","SARS-CoV-2","TAATTTTAACAGGAAA",4,60.29,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G155D P169G Q176T",3
"lib1","SARS-CoV-2","TAATTTTAAGCGGATT",1,32.74,10.7,-0.07,0.07,2.86,1.09,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","TAATTTTAGCATGATA",7,31.79,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G9V F17E N40R F70Y E135N F167W",6
"lib1","SARS-CoV-2","TAATTTTAGGATATGT",2,77.02,10.27,-0.49,0.04,2.89,1.01,0,">1 nonsynonymous","S45Y G174A",2
"lib1","SARS-CoV-2","TAATTTTATCATGATA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V G86L F99Y",3
"lib1","SARS-CoV-2","TAATTTTATTCACGCC",3,16.94,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42L T46G F99Y E154A",4
"lib1","SARS-CoV-2","TAATTTTCCACAGAGC",7,112.22,9.92,-0.84,0.05,2.68,1.06,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","TAATTTTCGACACAGG",1,9.48,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L38Q Y91H P149H T170K",4
"lib1","SARS-CoV-2","TAATTTTCTCCGGCAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S36* A42T F126V L162W",4
"lib1","SARS-CoV-2","TAATTTTGAACGCTAT",10,139.4,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y39L A89G Y123L L131M G166I",5
"lib1","SARS-CoV-2","TAATTTTGAGTAATGT",1,10.38,6.08,-4.68,0.71,1.5,1.08,0.01,">1 nonsynonymous","C6S Y93M L183C",3
"lib1","SARS-CoV-2","TAATTTTGATGTCGAA",5,49.05,10.65,-0.11,0.05,2.89,1.1,0,"1 nonsynonymous","T63N",1
"lib1","SARS-CoV-2","TAATTTTGCACCCAAT",3,73.26,10.77,0,0.1,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAATTTTGTACGAACT",6,70.05,6,-4.76,2,3,1.18,0,">1 nonsynonymous","K87E G117S E141T R179D",4
"lib1","SARS-CoV-2","TAATTTTTACATGAAT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47K D59S R73T N157H",4
"lib1","SARS-CoV-2","TAATTTTTGAAAAGAC",2,14.76,8.56,-2.21,0.35,1.5,1.04,0.04,">1 nonsynonymous","A33D F99Y",2
"lib1","SARS-CoV-2","TACAAAAAAACTTAAA",8,90.04,10.77,0,0.06,2.93,1.04,0,">1 nonsynonymous","D59S S139R",2
"lib1","SARS-CoV-2","TACAAAAAAATATAAT",6,107.96,10.76,0,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACAAAAAACAGAGCA",2,22.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N130W C158R",2
"lib1","SARS-CoV-2","TACAAAAAACAGCAAA",1,33.19,6,-4.76,1.47,1.5,1.11,0.01,">1 nonsynonymous","F70R E141M",2
"lib1","SARS-CoV-2","TACAAAAAAGATAGAT",10,73.06,9.87,-0.89,0.1,2.13,1.04,0,"1 nonsynonymous","I104G",1
"lib1","SARS-CoV-2","TACAAAAACAAACCAG",1,30.3,6.14,-4.63,0.28,3,1.1,0,">1 nonsynonymous","V37L V71R K87I K94M E154V",5
"lib1","SARS-CoV-2","TACAAAAACAAAGAGC",1,16.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L S108L",2
"lib1","SARS-CoV-2","TACAAAAACAGAGTCC",2,25.46,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","P82S K94V",2
"lib1","SARS-CoV-2","TACAAAAACTCATCCA",4,59.06,10.36,-0.41,0.03,2.94,1,0,">1 nonsynonymous","F12L C61N",2
"lib1","SARS-CoV-2","TACAAAAAGTCCGCAG",6,82.02,9.18,-1.58,0.09,1.99,1.12,0,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","TACAAAAATAAACGTA",14,251.24,10.72,-0.04,0.08,2.89,1.07,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","TACAAAAATCGATTAA",6,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S E76P",2
"lib1","SARS-CoV-2","TACAAAAATGAAATAC",2,7.14,6.1,-4.66,1.46,1.5,1.19,0.07,">1 nonsynonymous","S53L D59Y E76P",3
"lib1","SARS-CoV-2","TACAAAAATGTACATT",3,45.2,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F134R E141H P161H",3
"lib1","SARS-CoV-2","TACAAAAATTACAAAT",1,28.14,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","G9M L60R I80T T100I Q176L",5
"lib1","SARS-CoV-2","TACAAAACAAATCAAA",1,22.26,8.75,-2.01,0.33,1.5,1,0.06,">1 nonsynonymous","L57I P96M K198R",3
"lib1","SARS-CoV-2","TACAAAACCCGGACAC",2,9.08,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T63V E76A L125R I138P",4
"lib1","SARS-CoV-2","TACAAAACCGCCACAT",1,16.55,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T55H A81V D98A D137T",4
"lib1","SARS-CoV-2","TACAAAACTAACAAGT",9,152.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E N24S K87H K114R N130P P177G",6
"lib1","SARS-CoV-2","TACAAAACTCGGTTTA",1,12.39,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","W23M C61S N130F G155H K199N",5
"lib1","SARS-CoV-2","TACAAAACTGGACAAA",6,15.75,8.97,-1.79,0.26,1.5,1.01,0.03,">1 nonsynonymous","I88L P96S",2
"lib1","SARS-CoV-2","TACAAAAGAATATGCT",3,18.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103L P169Q S200C",3
"lib1","SARS-CoV-2","TACAAAAGCCCTGTAA",4,51.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23Q V65I G117T",3
"lib1","SARS-CoV-2","TACAAAAGTCCAGTGC",4,67.96,9.37,-1.39,0.08,2.8,1.13,0,">1 nonsynonymous","S29V Y119T",2
"lib1","SARS-CoV-2","TACAAAAGTGAAGTAA",5,64.23,10.38,-0.39,0.06,2.83,1,0,">1 nonsynonymous","S36W P149W",2
"lib1","SARS-CoV-2","TACAAAATAAACTTGT",3,28.11,6.53,-4.24,0.46,1.5,1.16,0.02,">1 nonsynonymous","W23K Y35T",2
"lib1","SARS-CoV-2","TACAAAATATGTTGAT",1,17.44,10.93,0.17,0.1,2.93,1,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TACAAAATATTCACCT",5,0.35,NA,NA,NA,NA,NA,NA,"stop","I28* T140R C150H",3
"lib1","SARS-CoV-2","TACAAAATCATATAAA",1,1.14,NA,NA,NA,NA,NA,NA,"stop","N13C T55P G86S K114* P149Y T201A",6
"lib1","SARS-CoV-2","TACAAAATGAACTGCG",1,18.55,10.11,-0.65,0.14,2.38,1,0.01,">1 nonsynonymous","Y66R E141G",2
"lib1","SARS-CoV-2","TACAAAATGACTAGGA",7,157.13,9.61,-1.15,0.12,2.54,1.1,0.01,">1 nonsynonymous","G152T V173E Y178V",3
"lib1","SARS-CoV-2","TACAAAATTAATTCCG",1,13.84,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","A14P F44V D98Y S139P Y159S T170L",6
"lib1","SARS-CoV-2","TACAAAATTTAACGAC",1,10.7,9.68,-1.08,0.33,1.6,1.04,0.07,"1 nonsynonymous","R25A",1
"lib1","SARS-CoV-2","TACAAACAAAAAAGAA",4,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R G83Q I104M Y121K E141N F160V Q168S G196W",8
"lib1","SARS-CoV-2","TACAAACAAAACAGGC",20,319.4,10.66,-0.11,0.03,2.92,1.02,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","TACAAACAACTAACAG",12,58.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","P7L I28L S41C F99G",4
"lib1","SARS-CoV-2","TACAAACACCCGGATT",5,101.51,10.53,-0.23,0.04,2.93,1,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","TACAAACACTTAATAT",5,82.52,9.17,-1.59,0.08,2.75,1.15,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","TACAAACAGAAGTCGG",3,64.97,10.73,-0.03,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAACAGATAAAAA",6,113.18,6.78,-3.98,0.24,1.5,1.14,0.01,">1 nonsynonymous","C31T K128G Y159L",3
"lib1","SARS-CoV-2","TACAAACATGTCATAT",1,15.33,6.14,-4.62,0.99,1.5,1.17,0.03,">1 nonsynonymous","A14S I72G K114N E154S G166F",5
"lib1","SARS-CoV-2","TACAAACCATAGTTAT",8,1.85,NA,NA,NA,NA,NA,NA,"stop","D90R D112G L125*",3
"lib1","SARS-CoV-2","TACAAACCATTAATGA",1,54.58,10.79,0.03,0.05,2.93,1.03,0,">1 nonsynonymous","N1Q P197R",2
"lib1","SARS-CoV-2","TACAAACCCAAATAGC",11,54.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2Q G86W G101H",3
"lib1","SARS-CoV-2","TACAAACCGGGCCACT",3,67.45,9.37,-1.39,0.16,1.81,1.22,0.01,">1 nonsynonymous","E10K D34A S41N N151I",4
"lib1","SARS-CoV-2","TACAAACCGTTGCCGT",7,184.74,10.44,-0.33,0.06,2.8,1.07,0,">1 nonsynonymous","N1Q C61E S129F",3
"lib1","SARS-CoV-2","TACAAACGAAGGTTAA",2,29.15,10.85,0.09,0.12,2.85,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAACGATACGACG",2,49.79,10.66,-0.1,0.08,2.85,1.06,0,">1 nonsynonymous","L5V V37N",2
"lib1","SARS-CoV-2","TACAAACGCTGAGGGG",4,83.3,10.74,-0.03,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAACGTTAGAAAA",2,28.44,10.14,-0.62,0.16,2.38,1.04,0.01,">1 nonsynonymous","I2S I28S P197Y",3
"lib1","SARS-CoV-2","TACAAACGTTTGACCA",3,99.85,9.95,-0.81,0.1,2.41,1.02,0,">1 nonsynonymous","E10S Y35R",2
"lib1","SARS-CoV-2","TACAAACTTTACCAAG",1,0.76,NA,NA,NA,NA,NA,NA,"stop","C61* E76Y F99L S113Y",4
"lib1","SARS-CoV-2","TACAAAGAAAAGAATC",2,111.08,10.07,-0.7,0.06,2.67,1.02,0,">1 nonsynonymous","E10S N107P K199M",3
"lib1","SARS-CoV-2","TACAAAGAAATGTATG",2,30.46,10.72,-0.04,0.12,2.95,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACAAAGATATATTTA",3,130.61,10.25,-0.51,0.04,2.91,1.03,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","TACAAAGCAGACCCCC",5,0.61,NA,NA,NA,NA,NA,NA,"stop","L5Q A18R V32* T63N Y165D Y178S",6
"lib1","SARS-CoV-2","TACAAAGCATGTATAG",3,13.78,10.73,-0.03,0.09,2.8,1.14,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","TACAAAGCCAAGAACC",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119S T170A",2
"lib1","SARS-CoV-2","TACAAAGCCATTAAGT",1,15.96,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G51D G86R R136V",3
"lib1","SARS-CoV-2","TACAAAGCTACAATAA",2,15.33,10.65,-0.11,0.06,2.79,1.12,0,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","TACAAAGGATAACTCC",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V N171D",2
"lib1","SARS-CoV-2","TACAAAGGCACTTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8N S19* R136S",3
"lib1","SARS-CoV-2","TACAAAGTAAACAGTC",3,25.17,10.74,-0.03,0.1,2.92,1.04,0.01,">1 nonsynonymous","G83L S129V",2
"lib1","SARS-CoV-2","TACAAAGTAAAGGCAA",4,32.18,7.97,-2.8,0.24,1.5,1.09,0.03,">1 nonsynonymous","F17L A42M K56T N107P N120S F160S",6
"lib1","SARS-CoV-2","TACAAAGTAATAAGAA",1,30.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S Y35R Y119L S129H",4
"lib1","SARS-CoV-2","TACAAAGTGATACAAC",5,39.79,6,-4.76,2,1.5,1.32,0.01,">1 nonsynonymous","N30L S41T S53I G86L",4
"lib1","SARS-CoV-2","TACAAATAAAGAGAAG",8,1.46,NA,NA,NA,NA,NA,NA,"stop","Y50* T63*",2
"lib1","SARS-CoV-2","TACAAATAAAGATCAA",6,9.72,10.52,-0.24,0.15,2.81,1,0.02,">1 nonsynonymous","P7H D90M",2
"lib1","SARS-CoV-2","TACAAATAAGATAAAA",5,49.01,10.82,0.06,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAATAAGCCACGA",1,33.29,10.13,-0.64,0.08,2.77,1.06,0,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","TACAAATACAAGTCTT",1,21.66,10.71,-0.05,0.06,2.91,1.06,0,"1 nonsynonymous","E141M",1
"lib1","SARS-CoV-2","TACAAATACCGATTAA",5,89.44,9.75,-1.01,0.09,2.11,1.07,0,">1 nonsynonymous","N58L N107S N120Q",3
"lib1","SARS-CoV-2","TACAAATACTGTCAAG",1,60.63,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5N D112P",2
"lib1","SARS-CoV-2","TACAAATAGATGCAAC",1,45.58,10.64,-0.13,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAATATTTGATGG",1,12.81,6.87,-3.89,0.22,1.5,1.06,0.01,">1 nonsynonymous","S36R I88F K94R",3
"lib1","SARS-CoV-2","TACAAATCTACTACTA",5,32.72,8.31,-2.45,0.18,1.68,1.16,0.02,">1 nonsynonymous","Y91T T140S P149E",3
"lib1","SARS-CoV-2","TACAAATGAAAAGAGA",3,123.22,8.5,-2.26,0.11,2.87,1.05,0.01,">1 nonsynonymous","G9L L125C G166S",3
"lib1","SARS-CoV-2","TACAAATGCACGAAGT",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R G86E Y143S E154L",4
"lib1","SARS-CoV-2","TACAAATGGAGATACC",6,36.69,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","P54C V103T R136V",3
"lib1","SARS-CoV-2","TACAAATGTTATGACC",2,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N D34N N171T",3
"lib1","SARS-CoV-2","TACAAATTAAAATACA",6,50.1,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A33W Y93S P197C",3
"lib1","SARS-CoV-2","TACAAATTAAATGCGG",7,2.28,NA,NA,NA,NA,NA,NA,"stop","K87N S113G N151*",3
"lib1","SARS-CoV-2","TACAAATTACCCACGG",2,69.24,9.29,-1.47,0.13,1.79,1.13,0.01,">1 nonsynonymous","Y91F Q168R Q176W",3
"lib1","SARS-CoV-2","TACAAATTATTAATAC",21,281.11,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4R G51K N120G G172R",4
"lib1","SARS-CoV-2","TACAAATTGCGCACAA",7,184.19,10.61,-0.15,0.04,2.89,1.04,0,">1 nonsynonymous","T15S C61Y",2
"lib1","SARS-CoV-2","TACAAATTTGCACCCG",3,12.87,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","A14G V77A Q144T",3
"lib1","SARS-CoV-2","TACAAATTTGGATAAA",7,51.42,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S45L D68R P82M R136L",4
"lib1","SARS-CoV-2","TACAACAAAATCCTTT",4,0.28,NA,NA,NA,NA,NA,NA,"stop","I2S S41* K87N",3
"lib1","SARS-CoV-2","TACAACAAATATATAT",1,9.18,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","D75K I88R",2
"lib1","SARS-CoV-2","TACAACAAATGATCCG",5,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L V103D",2
"lib1","SARS-CoV-2","TACAACAACCCCTAAT",2,2.83,NA,NA,NA,NA,NA,NA,"stop","F62C T100* L122T T148A",4
"lib1","SARS-CoV-2","TACAACAAGAATACGT",7,40.29,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A81T W106D I142L",3
"lib1","SARS-CoV-2","TACAACACAAAAAATT",9,1.29,NA,NA,NA,NA,NA,NA,"stop","C6P Y119R S147Y G174* H189S",5
"lib1","SARS-CoV-2","TACAACACCACTAATT",1,62.32,10.71,-0.05,0.06,2.96,1.01,0,"1 nonsynonymous","K198P",1
"lib1","SARS-CoV-2","TACAACACGGATTCGG",6,53.3,6.06,-4.71,0.67,3,1.19,0.01,">1 nonsynonymous","C61T W106L F156H T170C",4
"lib1","SARS-CoV-2","TACAACACGTTTTTAG",9,133.39,10.63,-0.13,0.03,2.94,1.02,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","TACAACAGAGACTAAT",11,65.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6I F99K",2
"lib1","SARS-CoV-2","TACAACAGAGATGTAG",1,18.54,10.17,-0.59,0.11,2.87,1.06,0,"1 nonsynonymous","C31E",1
"lib1","SARS-CoV-2","TACAACAGATTTCTTA",2,26.2,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","I88K S200P",2
"lib1","SARS-CoV-2","TACAACAGGCACACTT",2,17.54,9.01,-1.75,0.2,1.68,1.21,0.02,">1 nonsynonymous","D90S L95M S164W",3
"lib1","SARS-CoV-2","TACAACAGTACTTGTC",2,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31Q D90N",2
"lib1","SARS-CoV-2","TACAACATAAATACGC",6,103.13,10.64,-0.13,0.04,2.95,1.02,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","TACAACATAAATTACT",3,42.39,6,-4.76,1.49,1.5,1.18,0.01,">1 nonsynonymous","P96R N130S Y165A",3
"lib1","SARS-CoV-2","TACAACATAGACGTCA",1,7.38,10.92,0.16,0.1,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAACATAGCAACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42V A105*",2
"lib1","SARS-CoV-2","TACAACATATAACGCT",2,11.62,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","A33R N58R V103F",3
"lib1","SARS-CoV-2","TACAACATGAATGCAA",6,78.8,8.46,-2.31,0.12,2.25,1.08,0.01,">1 nonsynonymous","V52R C61R Y119Q",3
"lib1","SARS-CoV-2","TACAACATGTCAAAGA",3,55.93,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39F V52S K114S Y143C",4
"lib1","SARS-CoV-2","TACAACATTCCCTGCA",6,100.31,10.71,-0.05,0.05,2.89,1.07,0,">1 nonsynonymous","Y39K F44W T55Y",3
"lib1","SARS-CoV-2","TACAACCAGAAGCGGC",1,73.19,10.81,0.04,0.06,2.92,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TACAACCCCGCTAACA",3,16.79,10.93,0.17,0.11,2.86,1.1,0,">1 nonsynonymous","N24R S36K S200Y",3
"lib1","SARS-CoV-2","TACAACCCGCCCTAAT",2,15.65,6.09,-4.68,0.27,3,1.14,0,">1 nonsynonymous","T15R D75P G155R",3
"lib1","SARS-CoV-2","TACAACCCGTGTAATT",3,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96C A105N E135L",3
"lib1","SARS-CoV-2","TACAACCGCAAAAAAA",8,5.49,NA,NA,NA,NA,NA,NA,"stop","N4P V20H F62L V153N L183*",5
"lib1","SARS-CoV-2","TACAACCGCTTTATAT",5,95.94,8.32,-2.45,0.17,2.47,1.13,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","TACAACCTAGAAAAAT",5,0.88,NA,NA,NA,NA,NA,NA,"stop","R16E A33* F134N G166D",4
"lib1","SARS-CoV-2","TACAACCTAGCCCCCT",6,4.77,NA,NA,NA,NA,NA,NA,"stop","S53L F160*",2
"lib1","SARS-CoV-2","TACAACCTATATTGGA",7,60.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C158G P169D Y175R",3
"lib1","SARS-CoV-2","TACAACCTCTATCGTA",8,53.84,6,-4.76,1.15,1.5,1.23,0.02,">1 nonsynonymous","G86R A105M N151V",3
"lib1","SARS-CoV-2","TACAACCTGACCTATA",6,125.41,10.72,-0.05,0.04,2.89,1.04,0,"1 nonsynonymous","T63H",1
"lib1","SARS-CoV-2","TACAACCTGAGTAATT",1,37.32,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y21E G116I Y175I",3
"lib1","SARS-CoV-2","TACAACGAATAACATT",6,36.6,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","D34V K87N V103Y E141M",4
"lib1","SARS-CoV-2","TACAACGAATCCCAGG",6,32.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y35M I104Q E135V",3
"lib1","SARS-CoV-2","TACAACGAGATAATGT",1,25.9,10.95,0.18,0.08,3,1,0,">1 nonsynonymous","V37R Q163L",2
"lib1","SARS-CoV-2","TACAACGATCTTAAAT",6,58.34,7.53,-3.23,0.33,1.5,1.03,0.04,">1 nonsynonymous","K48I Q84P P149H",3
"lib1","SARS-CoV-2","TACAACGGAAAGGATA",4,33.11,6.75,-4.02,0.32,1.5,1.22,0.01,">1 nonsynonymous","E10G R25E T201I",3
"lib1","SARS-CoV-2","TACAACGTAAAGAATG",1,17.3,10.4,-0.37,0.06,2.83,1.11,0,">1 nonsynonymous","D75T I142L",2
"lib1","SARS-CoV-2","TACAACGTGATGTAAC",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113K Y119S L131A N171S",4
"lib1","SARS-CoV-2","TACAACGTTAAACGTA",1,26.55,10.73,-0.04,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAACTAAATTTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40I E141A R179Y A190S",4
"lib1","SARS-CoV-2","TACAACTAATGGGCCT",7,37.49,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y21G S36N F99S N107S N120S Y165L",6
"lib1","SARS-CoV-2","TACAACTACCACCCAA",8,18.15,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A18T I88Y Y123N E154F",4
"lib1","SARS-CoV-2","TACAACTAGCACGCGT",2,38.41,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N40F C158F",2
"lib1","SARS-CoV-2","TACAACTAGTCACGAT",8,61.65,10.03,-0.74,0.2,1.68,1.01,0.01,">1 nonsynonymous","D34L E141I",2
"lib1","SARS-CoV-2","TACAACTATAATGTGG",6,0.28,NA,NA,NA,NA,NA,NA,"stop","I104M P133S L162I K198*",4
"lib1","SARS-CoV-2","TACAACTATTTTCTAT",3,114.65,10.76,0,0.08,2.94,1.03,0,"1 nonsynonymous","R27L",1
"lib1","SARS-CoV-2","TACAACTCATACATGA",3,25.24,10.03,-0.73,0.15,2.33,1.07,0.01,">1 nonsynonymous","K56A C61K P96R",3
"lib1","SARS-CoV-2","TACAACTCCATACCTG",3,63.93,9.4,-1.37,0.08,2.84,1.11,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","TACAACTCTATTCAAG",6,50.67,6.08,-4.68,0.29,1.5,1.16,0,">1 nonsynonymous","T3S G86T D112T V182C",4
"lib1","SARS-CoV-2","TACAACTGCCCGTAAC",2,52.02,8.73,-2.04,0.1,2.86,1.04,0,"1 nonsynonymous","S113K",1
"lib1","SARS-CoV-2","TACAACTGGTTAATAC",5,33.64,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","G86L P149L F156A",3
"lib1","SARS-CoV-2","TACAACTTAAACTCTT",2,15.43,6.95,-3.82,0.31,2.2,1.14,0.02,">1 nonsynonymous","T15V S19E V103I",3
"lib1","SARS-CoV-2","TACAACTTATATTGAA",1,39.23,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","TACAACTTCACCACTA",4,0.61,NA,NA,NA,NA,NA,NA,"stop","A14I F44C F134* Y175H",4
"lib1","SARS-CoV-2","TACAACTTCCATGTAA",4,5.61,10.12,-0.64,0.2,2.42,1.07,0.01,">1 nonsynonymous","A33N F44A",2
"lib1","SARS-CoV-2","TACAACTTTAGAACCA",3,56.18,8.99,-1.78,0.28,1.5,1,0.04,">1 nonsynonymous","V11H I28T D59R",3
"lib1","SARS-CoV-2","TACAACTTTGGTTCAG",3,38.62,10.83,0.07,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGAAATGATAAC",1,8.7,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L5F G86E L111T L122C S200Y",5
"lib1","SARS-CoV-2","TACAAGAACCGGCCCG",2,33.74,6.38,-4.38,0.64,1.5,1.26,0.03,">1 nonsynonymous","Y66A P96T L111N V173E",4
"lib1","SARS-CoV-2","TACAAGAATTTGCAAG",7,86.9,10.7,-0.06,0.07,2.92,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACAAGACAAAGTATT",5,42.37,10.09,-0.67,0.07,2.81,1,0,">1 nonsynonymous","T55C D90N S139A",3
"lib1","SARS-CoV-2","TACAAGACCCTAAAAT",7,1.47,NA,NA,NA,NA,NA,NA,"stop","S43* G83S K87T W106V F134I T170F L187T",7
"lib1","SARS-CoV-2","TACAAGACTAAGTAGG",4,95.12,10.18,-0.59,0.09,2.61,1.01,0,">1 nonsynonymous","K56P P149H T201P",3
"lib1","SARS-CoV-2","TACAAGACTAATCCTT",4,60.16,6.72,-4.04,0.27,1.5,1.13,0.01,">1 nonsynonymous","Y35T A42T N157Y P191H",4
"lib1","SARS-CoV-2","TACAAGACTATAAGTG",2,86.62,9.25,-1.52,0.06,2.77,1.14,0,">1 nonsynonymous","T46I A145L",2
"lib1","SARS-CoV-2","TACAAGAGGCGCATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","TACAAGATAATAAACC",8,125.49,9.99,-0.77,0.04,2.94,1,0,">1 nonsynonymous","K56N K114N L125A",3
"lib1","SARS-CoV-2","TACAAGATCATGAAAA",5,56.33,10.16,-0.6,0.09,2.65,1,0,">1 nonsynonymous","F44K Y66F P149T",3
"lib1","SARS-CoV-2","TACAAGATCTGTGCCT",5,57,10.4,-0.36,0.04,2.89,1.06,0,">1 nonsynonymous","T3S A42F N120D S139A",4
"lib1","SARS-CoV-2","TACAAGATTAAATTTA",6,103.79,10.14,-0.62,0.05,2.71,1.04,0,">1 nonsynonymous","F47I N64P P149Y V153N",4
"lib1","SARS-CoV-2","TACAAGATTTTGAAAT",2,13.63,10.38,-0.38,0.05,2.95,1,0,">1 nonsynonymous","A22E Y35T",2
"lib1","SARS-CoV-2","TACAAGCAAGAAAATT",4,12.34,9.06,-1.7,0.3,1.5,1.25,0.04,">1 nonsynonymous","Y35I P82M",2
"lib1","SARS-CoV-2","TACAAGCACTCTGCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","R25* D68Q A81P",3
"lib1","SARS-CoV-2","TACAAGCCAAAAATAT",6,36.42,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I2N C6S V20L K48Q P54Q Y93R D112P L125D",8
"lib1","SARS-CoV-2","TACAAGCCAATTTCCG",1,15.75,10.63,-0.13,0.06,2.8,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGCCCTTAATCT",2,152.86,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F17Q V37C Y143R",3
"lib1","SARS-CoV-2","TACAAGCGCTCGACAG",3,27.12,7.48,-3.29,0.29,1.5,1.2,0.03,">1 nonsynonymous","Q79R L122K Q176R",3
"lib1","SARS-CoV-2","TACAAGCGTCACTAGA",3,29.91,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D68K Y119K S139H",3
"lib1","SARS-CoV-2","TACAAGCTACAACACA",2,26.25,6.2,-4.56,0.5,1.5,1.17,0.01,">1 nonsynonymous","K94I N118Y",2
"lib1","SARS-CoV-2","TACAAGCTTTTAGAGA",2,16.1,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F12K Y165G P177F",3
"lib1","SARS-CoV-2","TACAAGGACACAAGCA",10,158.5,10.65,-0.11,0.05,2.9,1.03,0,">1 nonsynonymous","C61Q L95V Q163G",3
"lib1","SARS-CoV-2","TACAAGGAGCCAGCTT",1,7.84,10.63,-0.13,0.19,2.86,1,0.03,">1 nonsynonymous","T85L K128P",2
"lib1","SARS-CoV-2","TACAAGGCATCTGTAA",3,25.86,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","F70N P96Y R136D",3
"lib1","SARS-CoV-2","TACAAGGGTTACTTCA",2,72.79,10.76,0,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGGTCAAAACAT",2,7.93,7.69,-3.07,0.35,1.72,1.09,0.03,">1 nonsynonymous","A18T S41P Y121T",3
"lib1","SARS-CoV-2","TACAAGTAACGACACT",13,161.92,10.29,-0.48,0.03,2.87,1.02,0,">1 nonsynonymous","G51A S200G",2
"lib1","SARS-CoV-2","TACAAGTAATGAGTCT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","Y35L S41E G51* G116N",4
"lib1","SARS-CoV-2","TACAAGTATCTGCTTG",1,8.1,10.86,0.09,0.31,2.88,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGTCAAACTTAC",1,8.83,10.7,-0.06,0.09,2.95,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGTCAATCTGAT",8,114.22,10.81,0.05,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAAGTGTTAATGGT",7,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A A42P D97T W106S Y123T A192M",6
"lib1","SARS-CoV-2","TACAAGTTTGTGAACC",3,17.95,10.69,-0.07,0.07,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAATAAAACCAAGT",6,60.35,6.15,-4.62,0.47,1.5,1.15,0.01,">1 nonsynonymous","A89R S113L",2
"lib1","SARS-CoV-2","TACAATAAAATAAATC",6,116.09,10.72,-0.04,0.04,2.91,1.05,0,"1 nonsynonymous","K94R",1
"lib1","SARS-CoV-2","TACAATAAAGCCCGTT",4,6.3,NA,NA,NA,NA,NA,NA,"stop","F99* S108H",2
"lib1","SARS-CoV-2","TACAATAAAGTTTTGA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","N13V F62G N107* R136K P149L F156K",6
"lib1","SARS-CoV-2","TACAATAACAATTAAT",3,23.98,8.68,-2.08,0.19,1.5,1.01,0.02,">1 nonsynonymous","L57V W106T",2
"lib1","SARS-CoV-2","TACAATAACCTATTGT",5,47.2,10.63,-0.14,0.11,2.85,1.12,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TACAATAACTCAGTCC",7,117.91,10.66,-0.11,0.07,2.87,1.06,0,"1 nonsynonymous","I138E",1
"lib1","SARS-CoV-2","TACAATAATATTTCAC",2,0.64,NA,NA,NA,NA,NA,NA,"stop","L60M T85D G101M Y123*",4
"lib1","SARS-CoV-2","TACAATACAAGAACAA",6,77.17,8.39,-2.37,0.17,1.97,1.1,0.01,"1 nonsynonymous","G74T",1
"lib1","SARS-CoV-2","TACAATACATGAGCAA",5,342.02,8.8,-1.96,0.13,1.6,1.12,0.01,">1 nonsynonymous","E10H N107S S139A",3
"lib1","SARS-CoV-2","TACAATACCAGAGTAT",1,17.11,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N30M C49R",2
"lib1","SARS-CoV-2","TACAATACCATATCAA",7,1.77,NA,NA,NA,NA,NA,NA,"stop","A42M D112I K198*",3
"lib1","SARS-CoV-2","TACAATACCGTGTGAT",1,1.99,NA,NA,NA,NA,NA,NA,"stop","N4Y Y66* T100I Y143L",4
"lib1","SARS-CoV-2","TACAATACTCTAACCA",4,0.43,NA,NA,NA,NA,NA,NA,"stop","N110*",1
"lib1","SARS-CoV-2","TACAATAGAACCTAAA",2,7.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2D A14H Y66Q A89R S164T",5
"lib1","SARS-CoV-2","TACAATAGCATTGGGC",3,0.23,NA,NA,NA,NA,NA,NA,"stop","N64I D97* Q168M",3
"lib1","SARS-CoV-2","TACAATAGCGACATAA",3,23.64,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","L5H D34L N118P N157L",4
"lib1","SARS-CoV-2","TACAATAGGAGCAAAA",2,11.97,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6G A33T K56F F167S",4
"lib1","SARS-CoV-2","TACAATAGTCGATCCA",2,112.26,10.75,-0.01,0.06,2.94,1.03,0,">1 nonsynonymous","C61H V173R",2
"lib1","SARS-CoV-2","TACAATAGTCTGAACT",1,42.96,6.32,-4.45,0.47,1.5,1.12,0.01,">1 nonsynonymous","G117V Y175C",2
"lib1","SARS-CoV-2","TACAATATAATTCCCA",4,21.67,9.28,-1.49,0.36,1.5,1,0.07,">1 nonsynonymous","V37N F44L E76M R136L T201S",5
"lib1","SARS-CoV-2","TACAATATACAGACAT",2,7.3,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","N24S S45I G83R E135K G174P",5
"lib1","SARS-CoV-2","TACAATATAGACAGCA",5,50.7,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G86D Q144Y",2
"lib1","SARS-CoV-2","TACAATATAGGTGAGG",3,60.2,10.31,-0.45,0.07,2.79,1.09,0,">1 nonsynonymous","A42E S139V",2
"lib1","SARS-CoV-2","TACAATATATTGACAC",3,39.9,7.81,-2.95,0.13,2.39,1.19,0,">1 nonsynonymous","P149K C158S",2
"lib1","SARS-CoV-2","TACAATATTAGCTAGT",5,83.24,9.26,-1.51,0.12,2.32,1.15,0.01,">1 nonsynonymous","A33V F62T S69L V173D",4
"lib1","SARS-CoV-2","TACAATATTGTTTGTA",4,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V G146L",2
"lib1","SARS-CoV-2","TACAATCAAAGTCAAA",6,51.62,10.76,-0.01,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAATCAACCTTATG",1,5.01,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","S53R R179P",2
"lib1","SARS-CoV-2","TACAATCAATATCGGG",2,21.12,10,-0.76,0.11,2.61,1.08,0.01,">1 nonsynonymous","D34A P54V",2
"lib1","SARS-CoV-2","TACAATCAATATCTAA",3,125.12,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","N110D G116K E135D P149K Y159M Y178S K199N",7
"lib1","SARS-CoV-2","TACAATCACAGGACGG",2,8.75,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S29Y P82T R127V K132F T201R",5
"lib1","SARS-CoV-2","TACAATCACCCCCCCA",6,150.78,9.95,-0.81,0.09,2.34,1.04,0,">1 nonsynonymous","L57K N120S",2
"lib1","SARS-CoV-2","TACAATCACCTCCATA",1,71.78,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y39W Y66P G166S G196V",4
"lib1","SARS-CoV-2","TACAATCACTACCCGT",3,8.6,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6D G86M S147Q L162E G172C A190S",6
"lib1","SARS-CoV-2","TACAATCACTCGCAAA",1,15.88,9.29,-1.47,0.24,1.58,1.11,0.02,">1 nonsynonymous","F12G V153L",2
"lib1","SARS-CoV-2","TACAATCAGAAACGTA",6,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V V37L Q79H G86R",4
"lib1","SARS-CoV-2","TACAATCATTAAGCTA",3,32.54,10.73,-0.03,0.04,2.97,1.01,0,">1 nonsynonymous","Q84V K128A",2
"lib1","SARS-CoV-2","TACAATCGACTATAAA",5,16.54,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","N40K F47V L60Y C102N",4
"lib1","SARS-CoV-2","TACAATCGTAAATACA",2,42.78,10.73,-0.03,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAATCTAAAAGTCT",3,34.68,10.3,-0.47,0.07,2.9,1,0,"1 nonsynonymous","A81T",1
"lib1","SARS-CoV-2","TACAATCTAACCTGGG",3,8.15,8.43,-2.34,0.3,1.5,1.27,0.04,">1 nonsynonymous","N13C I28M D97R K132N S139N",5
"lib1","SARS-CoV-2","TACAATCTATTAAAGT",1,43.07,6.61,-4.15,0.64,1.5,1.3,0.04,">1 nonsynonymous","F12Y G83V Y121F K199P",4
"lib1","SARS-CoV-2","TACAATCTCATACCAT",1,26.91,9.62,-1.14,0.09,2.77,1.08,0.01,">1 nonsynonymous","T85Y I138S G174K",3
"lib1","SARS-CoV-2","TACAATCTCCTCGAAT",6,55.58,6,-4.76,1.25,1.5,1.15,0.02,">1 nonsynonymous","F12R S69W P149N",3
"lib1","SARS-CoV-2","TACAATCTGAGCAGTT",1,36.25,9.91,-0.86,0.18,2.34,1.06,0.01,">1 nonsynonymous","Y66D D90K G152N",3
"lib1","SARS-CoV-2","TACAATCTGCAACTCA",1,13.42,9.51,-1.25,0.32,1.5,1.1,0.04,">1 nonsynonymous","C49F L111R P149L",3
"lib1","SARS-CoV-2","TACAATCTTATACCAT",12,319.51,10.25,-0.52,0.04,2.92,1.02,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","TACAATCTTCAAACAC",2,29.07,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G9V G51I F62I G83F N107T P161G Q168L",7
"lib1","SARS-CoV-2","TACAATCTTTTTACTA",2,8.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G I88L V103N",3
"lib1","SARS-CoV-2","TACAATGAACCTGACA",1,28.8,10.07,-0.69,0.13,2.73,1.1,0.01,">1 nonsynonymous","N64T T85Q V115S I138K",4
"lib1","SARS-CoV-2","TACAATGACAACAGAC",2,27.61,7.89,-2.88,0.17,1.5,1.17,0.01,">1 nonsynonymous","V37G L60V G86C K199W",4
"lib1","SARS-CoV-2","TACAATGCATGCAACT",2,13.16,8.97,-1.79,0.14,1.88,1.08,0.01,">1 nonsynonymous","G9L F160I Y178A",3
"lib1","SARS-CoV-2","TACAATGCGCAATAAA",2,8.83,10.06,-0.7,0.19,2.76,1,0.01,">1 nonsynonymous","T15E S41V E141M",3
"lib1","SARS-CoV-2","TACAATGGACAACACC",1,23.18,10.5,-0.26,0.11,2.97,1.03,0,">1 nonsynonymous","S41T P54R N130A",3
"lib1","SARS-CoV-2","TACAATGGATCAATCC",1,46.83,10.04,-0.72,0.08,2.7,1,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","TACAATGGGACTACAA",5,46.66,7.54,-3.22,0.19,1.52,1.13,0.01,">1 nonsynonymous","T15C L125K",2
"lib1","SARS-CoV-2","TACAATGGTACGGAGG",4,176.46,10.13,-0.63,0.05,2.85,1,0,">1 nonsynonymous","S45M C61D",2
"lib1","SARS-CoV-2","TACAATGTACATTTTC",3,51.65,10.81,0.05,0.09,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAATGTATACAAAA",3,11.09,9.98,-0.78,0.37,1.97,1.09,0.04,">1 nonsynonymous","T63R E135L P149R",3
"lib1","SARS-CoV-2","TACAATGTCGCAAAAT",1,10.4,6.76,-4,0.4,1.5,1,0.04,">1 nonsynonymous","D97C G155N V180R",3
"lib1","SARS-CoV-2","TACAATGTTCGAAAAC",11,93.63,10.61,-0.16,0.04,2.91,1.03,0,">1 nonsynonymous","L5S D98M",2
"lib1","SARS-CoV-2","TACAATTACCGCGATG",1,22.43,10.27,-0.5,0.08,3,1,0,">1 nonsynonymous","S43C G174Q",2
"lib1","SARS-CoV-2","TACAATTAGAACATCA",12,75.35,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F62Q F99I E141M K199Y",4
"lib1","SARS-CoV-2","TACAATTAGCTCAAAT",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89W V181G T201P",3
"lib1","SARS-CoV-2","TACAATTATACCAGTT",2,36.11,10.09,-0.68,0.1,2.59,1.05,0,">1 nonsynonymous","D34V K56L L122V",3
"lib1","SARS-CoV-2","TACAATTCCATGGGAG",6,72.69,10.42,-0.34,0.05,2.88,1.09,0,"1 nonsynonymous","K87I",1
"lib1","SARS-CoV-2","TACAATTTAGGAGGAA",1,127.45,8.46,-2.3,0.11,2.85,1.08,0,">1 nonsynonymous","Y119S F156T K199M",3
"lib1","SARS-CoV-2","TACAATTTATAACTCG",1,48.91,10.05,-0.71,0.09,2.66,1.05,0,">1 nonsynonymous","S36Y N130F",2
"lib1","SARS-CoV-2","TACAATTTATACGTCA",3,58.98,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","I72K T100P",2
"lib1","SARS-CoV-2","TACAATTTGGAATCGT",1,23.34,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D112E P177Q",2
"lib1","SARS-CoV-2","TACAATTTTAATAGCC",9,3.85,NA,NA,NA,NA,NA,NA,"stop","G9I F17P S45C G51I F99G L125S F156R G172*",8
"lib1","SARS-CoV-2","TACACAAAAGAATCAG",2,8.39,7.33,-3.43,0.44,1.5,1.24,0.05,">1 nonsynonymous","Q84R D112Y",2
"lib1","SARS-CoV-2","TACACAAAAGAGCTAA",3,20.24,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","P82R K94C S113M K199I",4
"lib1","SARS-CoV-2","TACACAAAAGATTTGC",9,109.3,10.73,-0.03,0.1,2.74,1.04,0,">1 nonsynonymous","C61A T100Y",2
"lib1","SARS-CoV-2","TACACAAAATACTAGA",1,38.32,6,-4.76,2,2.27,1.25,0.01,">1 nonsynonymous","F70P D98I N107T Y119S E141R S147N",6
"lib1","SARS-CoV-2","TACACAAAATGCAACA",5,20.36,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","L5P Y50Q D137S",3
"lib1","SARS-CoV-2","TACACAAACTAACTAC",11,244.5,10.77,0,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TACACAAAGTCGTTTT",7,0.69,NA,NA,NA,NA,NA,NA,"stop","V77* I88* L122Y",3
"lib1","SARS-CoV-2","TACACAAATCAGTACC",2,14.52,10.54,-0.23,0.1,2.95,1,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","TACACAAATGACCCAA",4,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y V65E L122K E186A",4
"lib1","SARS-CoV-2","TACACAAATGGGAACT",5,129.31,10.63,-0.14,0.05,2.89,1.07,0,"1 nonsynonymous","V37D",1
"lib1","SARS-CoV-2","TACACAACAACACAAT",2,19.14,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","I2P R73E F134T S200F",4
"lib1","SARS-CoV-2","TACACAACCATCTTCG",3,81.8,10.47,-0.29,0.04,2.88,1.02,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","TACACAACTGTGCGGG",1,28.75,10.89,0.13,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACAAGAAAAAGCA",2,5.93,10.03,-0.73,0.11,2.75,1,0.01,">1 nonsynonymous","N4H N30K G174A",3
"lib1","SARS-CoV-2","TACACAAGATGTCAAG",1,7.73,9.93,-0.83,0.2,2.61,1,0.02,">1 nonsynonymous","A14I N64L",2
"lib1","SARS-CoV-2","TACACAAGATGTCGCA",3,26.9,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","V77R F99H F134R",3
"lib1","SARS-CoV-2","TACACAAGCATATTAC",6,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R N58S I104N G172M",4
"lib1","SARS-CoV-2","TACACAATAACACAAA",5,8.44,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L5H F44V L60Y D90C A105L C158A F185V",7
"lib1","SARS-CoV-2","TACACAATAACGGACT",7,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R P82V",2
"lib1","SARS-CoV-2","TACACAATACAAACGC",4,27.08,10.68,-0.08,0.06,2.92,1,0,">1 nonsynonymous","N120Y N130S K198S",3
"lib1","SARS-CoV-2","TACACAATCCACTTGT",4,79.22,9.87,-0.9,0.12,2.25,1.05,0.01,">1 nonsynonymous","Y35H Y50W F62C A190V",4
"lib1","SARS-CoV-2","TACACACAATTTCTTA",7,224.87,10.65,-0.12,0.04,2.89,1.05,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","TACACACACCCACTAA",8,25.05,6.02,-4.75,1.58,1.5,1.22,0.05,">1 nonsynonymous","C49L T100P L162F G172S",4
"lib1","SARS-CoV-2","TACACACATTGCTGAC",5,181.38,10.13,-0.63,0.05,2.69,1.06,0,">1 nonsynonymous","A67V K128I S147R K199M",4
"lib1","SARS-CoV-2","TACACACCAGGCAATA",10,29.51,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E10A A105I I138T C158A V180R S200V",6
"lib1","SARS-CoV-2","TACACACCCCCAGTCC",2,20.81,7.05,-3.71,0.38,1.5,1.05,0.05,">1 nonsynonymous","G9L C61Y N92P",3
"lib1","SARS-CoV-2","TACACACGAAAGGGTA",5,49,9.01,-1.75,0.08,1.87,1.13,0,">1 nonsynonymous","C49T K87T P149L S184Y",4
"lib1","SARS-CoV-2","TACACACGCATACGAA",7,49.1,6.06,-4.71,1.27,1.5,1.29,0.03,">1 nonsynonymous","C49L R73K K128T",3
"lib1","SARS-CoV-2","TACACACTAACATCTC",2,51.41,10.79,0.03,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACACTGCAATCAA",4,15.5,7.27,-3.5,0.42,1.5,1.08,0.08,">1 nonsynonymous","A33T D112F Y123R",3
"lib1","SARS-CoV-2","TACACACTGGAACCAA",7,60.25,10.38,-0.38,0.07,2.84,1.04,0,">1 nonsynonymous","A42Q Q84H E141V",3
"lib1","SARS-CoV-2","TACACAGAAATCCCCA",6,41.97,6.04,-4.73,1.01,1.5,1.17,0.02,">1 nonsynonymous","S43V Y91D P96N K128G",4
"lib1","SARS-CoV-2","TACACAGACAGCACTT",6,104.43,10.1,-0.67,0.07,2.65,1.03,0,">1 nonsynonymous","T3R P96D",2
"lib1","SARS-CoV-2","TACACAGACATCACTA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","S45L L60* D75* A105P Y119S",5
"lib1","SARS-CoV-2","TACACAGAGAAACCAG",4,1754.27,9.29,-1.48,0.13,1.68,1.11,0.01,">1 nonsynonymous","D75Y F185T T201Q",3
"lib1","SARS-CoV-2","TACACAGGCCTTGGTA",4,8,6,-4.76,2,1.5,1.11,0.07,">1 nonsynonymous","G9R S41R P82N K128A",4
"lib1","SARS-CoV-2","TACACAGGTACAACAC",7,27.4,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","R27S D90P G101S",3
"lib1","SARS-CoV-2","TACACAGTACAATACT",4,47.67,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N92K S139V",2
"lib1","SARS-CoV-2","TACACAGTACGTACAA",7,28.33,6,-4.76,2,3,1.15,0,">1 nonsynonymous","V77G N92P T140H",3
"lib1","SARS-CoV-2","TACACAGTCATGCACG",3,20.01,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","TACACAGTCGTGATGT",8,45.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F62R F167S",2
"lib1","SARS-CoV-2","TACACATAATAGCTCA",1,27.13,9.39,-1.37,0.13,1.92,1.05,0.01,">1 nonsynonymous","L5V R73K Y91L R136V",4
"lib1","SARS-CoV-2","TACACATAGTGAAAGC",3,108.81,10.82,0.06,0.06,2.94,1.02,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TACACATCCAACTGAA",2,36.87,10.86,0.09,0.06,2.98,1,0,">1 nonsynonymous","R16Q S53Q",2
"lib1","SARS-CoV-2","TACACATCTTAGAAAC",2,13.13,10.65,-0.12,0.13,3,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACACATGAAATGGGT",4,54.91,10.05,-0.71,0.13,2.42,1.05,0.01,">1 nonsynonymous","V65G V180C",2
"lib1","SARS-CoV-2","TACACATGACGGGTAA",2,8.49,10.65,-0.11,0.11,2.86,1.08,0,">1 nonsynonymous","S29G A33S",2
"lib1","SARS-CoV-2","TACACATGCGCCACCA",6,43.11,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61D G83S G101C G146K",4
"lib1","SARS-CoV-2","TACACATTAGTCGGGA",6,41.46,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y35V G101L S139F G166N",4
"lib1","SARS-CoV-2","TACACCAACCGTATTC",3,74.65,10.68,-0.09,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACCAAGGATTCAC",11,0.86,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib1","SARS-CoV-2","TACACCAATCGAAATG",6,21.4,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8N V103S E141S Y165R",4
"lib1","SARS-CoV-2","TACACCAATCGTATTT",4,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A T85M D98N V103H",4
"lib1","SARS-CoV-2","TACACCAATGTACCAC",3,31.44,8.03,-2.73,0.41,1.5,1.06,0.05,">1 nonsynonymous","K56D T63L P82M",3
"lib1","SARS-CoV-2","TACACCAATTGATAAT",3,29.63,9.17,-1.6,0.13,1.5,1.11,0.02,">1 nonsynonymous","C49V K128Y",2
"lib1","SARS-CoV-2","TACACCACAATTTGAT",6,48.16,10.18,-0.58,0.08,2.85,1,0,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","TACACCACCGGCAAAA",3,10.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L C102N V180A",3
"lib1","SARS-CoV-2","TACACCAGATCAAAAA",7,16.3,6,-4.76,2,3,1.04,0,">1 nonsynonymous","A81L N92F G146W G172T V181A L187A",6
"lib1","SARS-CoV-2","TACACCAGCTGACTTA",4,29.11,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P7E N92L F99W",3
"lib1","SARS-CoV-2","TACACCAGGAGGTTCT",3,11.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R L57H Y119G T140W",4
"lib1","SARS-CoV-2","TACACCATACTATTTA",9,152.33,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F8R A33G N64L K94S",4
"lib1","SARS-CoV-2","TACACCATATTATAAG",1,22.57,10.17,-0.6,0.06,2.96,1,0,">1 nonsynonymous","C61D G174L",2
"lib1","SARS-CoV-2","TACACCATCGACTCTG",1,30.98,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","I28K L95Q Q168T A192R",4
"lib1","SARS-CoV-2","TACACCATGTCGTCGA",2,15.37,10.12,-0.64,0.12,2.85,1,0.02,">1 nonsynonymous","K56S T63Q Y91M K128G K199R",5
"lib1","SARS-CoV-2","TACACCATGTTATGCT",1,19.03,6.5,-4.27,0.53,1.5,1.15,0.04,">1 nonsynonymous","C6A Y39R D97S N157F",4
"lib1","SARS-CoV-2","TACACCATTATAGTTA",4,79.88,10.71,-0.05,0.03,2.92,1.03,0,"1 nonsynonymous","L122T",1
"lib1","SARS-CoV-2","TACACCATTTTCAGCT",8,126.54,9.98,-0.78,0.1,2.34,1.02,0,"1 nonsynonymous","A81F",1
"lib1","SARS-CoV-2","TACACCCAAAGCGATC",2,21.9,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","F99D T170G",2
"lib1","SARS-CoV-2","TACACCCAACTAGGAA",5,96.22,10.63,-0.13,0.05,2.96,1,0,">1 nonsynonymous","C61L T201M",2
"lib1","SARS-CoV-2","TACACCCAGTCATACT",3,100.6,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33P N120T I142K G166T",4
"lib1","SARS-CoV-2","TACACCCCTGGTAAAA",1,15.96,9.25,-1.51,0.11,2.81,1.17,0.01,">1 nonsynonymous","L60S Q168V",2
"lib1","SARS-CoV-2","TACACCCTCAGGAACT",7,56.49,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C6Y G101T N151M T201L",4
"lib1","SARS-CoV-2","TACACCCTGATTGCGT",1,6.06,6,-4.76,2,3,1.01,0,">1 nonsynonymous","S41E N107L Q168L",3
"lib1","SARS-CoV-2","TACACCCTGGTCATGC",4,47.42,10.74,-0.02,0.06,2.93,1.06,0,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","TACACCGAACAGTAGA",5,95.97,10.7,-0.06,0.04,2.92,1.04,0,"1 nonsynonymous","S184G",1
"lib1","SARS-CoV-2","TACACCGATTAAGAAC",2,41.15,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L5Q V37N C49V W106L E141H G152F",6
"lib1","SARS-CoV-2","TACACCGCATACAGTA",9,89.6,10.74,-0.02,0.04,2.92,1.05,0,">1 nonsynonymous","P149L S200L",2
"lib1","SARS-CoV-2","TACACCGGTCGAACCT",6,17.08,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A42D G51L F62S F99M P169S T201M",6
"lib1","SARS-CoV-2","TACACCGTAACCAATT",10,111.11,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4A E76G N107D S113R V173E",5
"lib1","SARS-CoV-2","TACACCGTCTACCAAG",1,20.08,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","E10G I104K L122N E154I",4
"lib1","SARS-CoV-2","TACACCTAACAATCAG",5,40.7,8.05,-2.71,0.38,1.5,1.04,0.04,">1 nonsynonymous","D137L S200F",2
"lib1","SARS-CoV-2","TACACCTAATTTTTAA",1,11.24,9.82,-0.95,0.13,2.36,1.02,0.01,">1 nonsynonymous","R16S A105Y N120V",3
"lib1","SARS-CoV-2","TACACCTACATAGCCT",1,27.53,6.08,-4.69,0.47,3,1.17,0.01,"1 nonsynonymous","I88N",1
"lib1","SARS-CoV-2","TACACCTACTTGTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G101* I138D",2
"lib1","SARS-CoV-2","TACACCTAGACTCAAG",4,90.17,10.72,-0.04,0.07,2.93,1.05,0,">1 nonsynonymous","S29A A190S K198D",3
"lib1","SARS-CoV-2","TACACCTAGACTGCTA",3,30.75,6.3,-4.47,0.81,1.5,1.2,0.04,">1 nonsynonymous","S41A G101Q",2
"lib1","SARS-CoV-2","TACACCTAGCCGGATC",13,79.83,8.24,-2.52,0.13,2.05,1.1,0.01,">1 nonsynonymous","L5T Q168S Y175M",3
"lib1","SARS-CoV-2","TACACCTAGTCGACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* Q79H S147I E154R V173H",5
"lib1","SARS-CoV-2","TACACCTATTTAATTT",2,37.94,10.82,0.05,0.07,2.93,1.05,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","TACACCTCACCAGAAA",3,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A42E A81T P96Q L187S",5
"lib1","SARS-CoV-2","TACACCTCATAATACC",2,6.59,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","A14P A33K F47R Y91L W106L",5
"lib1","SARS-CoV-2","TACACCTGATCAGGCA",1,13.91,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","G9F L95Y",2
"lib1","SARS-CoV-2","TACACCTGTTTAAATA",1,13.07,10.88,0.12,0.08,2.9,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACCTTAAAACAGG",2,22.03,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","C49N",1
"lib1","SARS-CoV-2","TACACCTTAATACGGC",1,32.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S43G D98G G116S Q163H F167S",5
"lib1","SARS-CoV-2","TACACCTTTTAAACAT",7,52.22,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F12K L131Y",2
"lib1","SARS-CoV-2","TACACGAAAAAACTCC",10,291.87,10.05,-0.71,0.07,2.31,1.05,0,">1 nonsynonymous","N40F Y178N",2
"lib1","SARS-CoV-2","TACACGAACAATGCAA",1,18.49,10.78,0.02,0.07,2.99,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACGAATACACAAT",5,36.6,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","G101S Y123M",2
"lib1","SARS-CoV-2","TACACGACCCGCACAT",3,53.95,8.89,-1.88,0.06,2.98,1.03,0,">1 nonsynonymous","C61K F167W",2
"lib1","SARS-CoV-2","TACACGAGAAGGAATA",3,80.56,10.74,-0.02,0.08,2.83,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TACACGAGGCACCATA",2,28.8,10.09,-0.67,0.03,2.76,1.09,0,">1 nonsynonymous","F44L D97H N110L",3
"lib1","SARS-CoV-2","TACACGAGTCTCCACC",2,21.55,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A105K Y159W",2
"lib1","SARS-CoV-2","TACACGCAAAAAAACA",1,27.26,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y66T A81T G83I L162Q",4
"lib1","SARS-CoV-2","TACACGCGAATAATTC",2,3.87,NA,NA,NA,NA,NA,NA,"stop","S69* Y123V",2
"lib1","SARS-CoV-2","TACACGGAAAACGTGG",1,10.58,10.85,0.08,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACACGGAACATCATA",6,53.88,10.18,-0.59,0.03,2.85,1,0,">1 nonsynonymous","C6T P149S",2
"lib1","SARS-CoV-2","TACACGGCCGTACAAC",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K V103R Y119V",3
"lib1","SARS-CoV-2","TACACGGGAATACCCC",4,99.44,9.96,-0.81,0.06,2.85,1,0,">1 nonsynonymous","N58D E154W T201P",3
"lib1","SARS-CoV-2","TACACGGGCCCGCTAC",3,8.93,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3V P96T N118A",3
"lib1","SARS-CoV-2","TACACGGGGTTACGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Y Y93* F99S C158L G174N",5
"lib1","SARS-CoV-2","TACACGGTTAGGACAC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","T140* Q163H",2
"lib1","SARS-CoV-2","TACACGTAACGGACCG",7,220.33,8.14,-2.62,0.18,1.5,1.07,0.01,">1 nonsynonymous","E10F G116A R127S",3
"lib1","SARS-CoV-2","TACACGTACGGCCCCG",1,95.8,10.02,-0.74,0.11,2.34,1.02,0,">1 nonsynonymous","D90G K128S P149V",3
"lib1","SARS-CoV-2","TACACGTAGAACAATT",1,15.89,8.65,-2.12,0.38,1.5,1.18,0.05,">1 nonsynonymous","S43H P96H N130R S139N Q168T",5
"lib1","SARS-CoV-2","TACACGTATTGAGAAC",7,51.63,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S113R N120L P149I V153R",4
"lib1","SARS-CoV-2","TACACGTCCTAAGACT",1,37.35,9.03,-1.74,0.06,2.84,1.04,0,">1 nonsynonymous","Y119L P149V",2
"lib1","SARS-CoV-2","TACACGTTTTCAATTT",6,10.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S41M I80W P96C",3
"lib1","SARS-CoV-2","TACACTACAAAGGACA",1,53.95,9.99,-0.78,0.04,2.98,1,0,"1 nonsynonymous","A145Q",1
"lib1","SARS-CoV-2","TACACTACAATTTAAA",2,5.8,6.6,-4.16,0.77,1.5,1.32,0.06,">1 nonsynonymous","V103A K132H",2
"lib1","SARS-CoV-2","TACACTACAGGCAATG",5,183.44,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G152A Q168E P177G T201S",4
"lib1","SARS-CoV-2","TACACTACGAAGCCGT",5,78.5,10.4,-0.37,0.06,2.85,1.03,0,">1 nonsynonymous","N1Y L57M",2
"lib1","SARS-CoV-2","TACACTACGCAATACG",2,17.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6S A42Q D112R",3
"lib1","SARS-CoV-2","TACACTAGAATCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L G101T C150G",3
"lib1","SARS-CoV-2","TACACTAGCAGCCTGC",3,74.5,10.1,-0.67,0.06,2.79,1.03,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","TACACTAGTCCAAGTT",3,18.55,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","F99S N118S P149V V181L",4
"lib1","SARS-CoV-2","TACACTATATCACTTC",1,41.93,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S43Y R124L Y175V",3
"lib1","SARS-CoV-2","TACACTATTCCACCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5E I104S P161F Y175*",4
"lib1","SARS-CoV-2","TACACTCAATATAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","I28*",1
"lib1","SARS-CoV-2","TACACTCACAATGGCG",6,88.07,6.02,-4.74,0.55,1.5,1.09,0.01,">1 nonsynonymous","F12A V20M G74S R124P V173G",5
"lib1","SARS-CoV-2","TACACTCACAGGGGGA",1,5.6,8.66,-2.1,0.19,1.97,1.1,0.01,">1 nonsynonymous","R27V V65L D90I G116R",4
"lib1","SARS-CoV-2","TACACTCAGACTTTAT",4,112.37,10.07,-0.69,0.06,2.55,1.03,0,"1 nonsynonymous","G51L",1
"lib1","SARS-CoV-2","TACACTCCTGTCTAAA",1,20.57,10.5,-0.26,0.07,2.93,1.04,0,">1 nonsynonymous","I2Y Y39P",2
"lib1","SARS-CoV-2","TACACTCTTAACCTTA",10,28.49,6,-4.76,2,3,1.39,0.01,">1 nonsynonymous","D97S G101N P177T",3
"lib1","SARS-CoV-2","TACACTGAAGAAAACA",3,151.09,6,-4.76,1.93,1.5,1.19,0.02,">1 nonsynonymous","R16V V37R D90I D97M K128H Q144P A190L",7
"lib1","SARS-CoV-2","TACACTGAGCTTTAAA",1,20.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K26R C49A G152L",3
"lib1","SARS-CoV-2","TACACTGCTACACTCT",4,15.4,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","I2A D90L P96I T140G G166S G174R",6
"lib1","SARS-CoV-2","TACACTGGTTGCCAAC",1,12.92,10.82,0.05,0.09,3,1,0,">1 nonsynonymous","Y39A N64T",2
"lib1","SARS-CoV-2","TACACTGTATCGCGAC",1,32.05,10.32,-0.45,0.08,2.76,1.05,0,">1 nonsynonymous","L57I F160V",2
"lib1","SARS-CoV-2","TACACTTACTACTGCG",3,52.34,8.44,-2.32,0.24,1.51,1.09,0.02,">1 nonsynonymous","D90R N107M",2
"lib1","SARS-CoV-2","TACACTTACTGCAGAA",5,17.77,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","L5K L60M Y93L C102R L122A S129I C195L",7
"lib1","SARS-CoV-2","TACACTTAGAAATCCA",8,51.16,8.19,-2.57,0.4,1.5,1,0.05,">1 nonsynonymous","A105L K128V",2
"lib1","SARS-CoV-2","TACACTTAGTTGCGCA",2,12.33,9.2,-1.56,0.17,1.82,1.18,0.02,">1 nonsynonymous","F12E T201L",2
"lib1","SARS-CoV-2","TACACTTATAACGAGA",1,41.65,10.8,0.04,0.1,2.95,1.03,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","TACACTTATGAATTGA",6,41.78,9.6,-1.16,0.2,1.73,1.15,0.02,"1 nonsynonymous","D68T",1
"lib1","SARS-CoV-2","TACACTTCCTAGCACA",1,32.96,10.83,0.06,0.09,2.94,1.03,0,">1 nonsynonymous","V37A P54T T85K",3
"lib1","SARS-CoV-2","TACACTTGTGCTGAAC",1,16.28,6,-4.76,2,1.5,1.27,0.04,"1 nonsynonymous","L95K",1
"lib1","SARS-CoV-2","TACACTTGTTTAACAA",3,508,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27E Y91A N107G G172R",4
"lib1","SARS-CoV-2","TACACTTTGTAATCTT",9,2.92,NA,NA,NA,NA,NA,NA,"stop","K87* Q176K",2
"lib1","SARS-CoV-2","TACACTTTTATTATGG",1,45.13,9.36,-1.4,0.08,2.82,1.07,0,">1 nonsynonymous","G9S Y91I G174E",3
"lib1","SARS-CoV-2","TACAGAAAAAAAGGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10W S45P G83* N92T",4
"lib1","SARS-CoV-2","TACAGAAACCTAGACA",5,162.67,10.49,-0.27,0.04,2.87,1.06,0,">1 nonsynonymous","S41L N64F",2
"lib1","SARS-CoV-2","TACAGAACACCTGGAA",5,60.79,9.02,-1.75,0.07,2.82,1.15,0,">1 nonsynonymous","G9S N157H",2
"lib1","SARS-CoV-2","TACAGAACAGCTTACT",3,79.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35L K56N I104L R124N",4
"lib1","SARS-CoV-2","TACAGAACATGCCTTT",5,128.06,10.76,-0.01,0.04,2.93,1.03,0,">1 nonsynonymous","L60Q S184W",2
"lib1","SARS-CoV-2","TACAGAACGTCTATAA",3,32.61,8.11,-2.65,0.25,1.5,1.07,0.02,">1 nonsynonymous","V11K L60D",2
"lib1","SARS-CoV-2","TACAGAACTAGTTTAC",2,0.35,NA,NA,NA,NA,NA,NA,"stop","T55G N64* D112G",3
"lib1","SARS-CoV-2","TACAGAACTATAATTT",1,51.16,9.85,-0.91,0.18,2.14,1.09,0.01,">1 nonsynonymous","E10V V52H",2
"lib1","SARS-CoV-2","TACAGAACTATTTCAA",3,38.03,10.7,-0.06,0.05,2.88,1.1,0,"1 nonsynonymous","L111F",1
"lib1","SARS-CoV-2","TACAGAAGATACATCT",4,20.24,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","A42S A89N P149T G155F",4
"lib1","SARS-CoV-2","TACAGAAGATGATGGA",3,155.34,10.15,-0.61,0.05,2.88,1.01,0,"1 nonsynonymous","N118Y",1
"lib1","SARS-CoV-2","TACAGAAGCGTTCTAG",2,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L S45T R73Q A81N S113D",5
"lib1","SARS-CoV-2","TACAGAATACTAGTCC",6,36.94,6.54,-4.22,0.49,1.5,1.16,0.02,">1 nonsynonymous","P54S Y91R R136S",3
"lib1","SARS-CoV-2","TACAGAATGACTGAAA",1,30.67,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L38A V52P A81I",3
"lib1","SARS-CoV-2","TACAGAATGCACTTAT",1,2.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","TACAGAATTACCGAAC",6,1.56,NA,NA,NA,NA,NA,NA,"stop","A89* K128P",2
"lib1","SARS-CoV-2","TACAGACAAACCTAGT",8,49.67,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P82Q S113Q",2
"lib1","SARS-CoV-2","TACAGACACTAATTCT",1,42.19,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A14P K87R Y175E",3
"lib1","SARS-CoV-2","TACAGACAGGATAGTT",4,131.27,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25K S36L V103F S139T P177G",5
"lib1","SARS-CoV-2","TACAGACATCTCCGAA",5,38.93,6.18,-4.58,0.83,1.5,1.26,0.03,">1 nonsynonymous","E76S D97I S139E P149R",4
"lib1","SARS-CoV-2","TACAGACATTTTACCC",1,26.11,8.46,-2.31,0.14,2.23,1.08,0.01,">1 nonsynonymous","W106Q Y119S T201S",3
"lib1","SARS-CoV-2","TACAGACCACCCCTCT",3,27.62,10.68,-0.08,0.04,2.88,1.09,0,"1 nonsynonymous","T46Y",1
"lib1","SARS-CoV-2","TACAGACCAGACGTAT",7,72.64,10.82,0.06,0.07,2.9,1.04,0,">1 nonsynonymous","L5K T100C",2
"lib1","SARS-CoV-2","TACAGACCATTAAAAA",2,11.39,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","G9S P54W L183C F185L",4
"lib1","SARS-CoV-2","TACAGACCCCCTTAGG",2,68.52,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P7Y A14L Y35P L38H S113E",5
"lib1","SARS-CoV-2","TACAGACCCTCCGTCA",3,37.76,9.03,-1.73,0.13,2.6,1.17,0.02,">1 nonsynonymous","L122E P177S",2
"lib1","SARS-CoV-2","TACAGACGTACAATAC",17,206.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A89F N130C Y178A",3
"lib1","SARS-CoV-2","TACAGACTAAATTAGT",7,69.59,10.65,-0.12,0.07,2.95,1.02,0,">1 nonsynonymous","R16F S147Y",2
"lib1","SARS-CoV-2","TACAGACTGAACGATA",4,46.12,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V11C S108H",2
"lib1","SARS-CoV-2","TACAGACTTGTTAAAT",2,28.53,8.73,-2.03,0.16,2.2,1.19,0.01,">1 nonsynonymous","G9P N118L",2
"lib1","SARS-CoV-2","TACAGAGAAATTAAAA",8,101.11,10.79,0.03,0.06,2.95,1.02,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","TACAGAGTAGTACCTT",2,93.22,10.58,-0.18,0.04,2.92,1,0,">1 nonsynonymous","Q84R A145G",2
"lib1","SARS-CoV-2","TACAGAGTGCGGTAAG",8,183.02,10.79,0.02,0.05,2.9,1.07,0,">1 nonsynonymous","T100M L122R",2
"lib1","SARS-CoV-2","TACAGATACATGCTAA",1,46.59,8.5,-2.27,0.09,2.75,1.06,0,">1 nonsynonymous","C61R S113T E154H",3
"lib1","SARS-CoV-2","TACAGATGAAATTTGA",9,186.23,10.87,0.1,0.07,2.92,1.05,0,"1 nonsynonymous","F160K",1
"lib1","SARS-CoV-2","TACAGATGCTCCAATT",2,20.93,6,-4.76,1.78,1.5,1.15,0.02,">1 nonsynonymous","T55L P161F",2
"lib1","SARS-CoV-2","TACAGATGTTAATTTC",7,124.35,10.75,-0.01,0.06,2.9,1.07,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TACAGATTAAATAAGC",2,21.17,10.86,0.1,0.11,2.83,1.1,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","TACAGATTGAAGAGAT",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57D K128F",2
"lib1","SARS-CoV-2","TACAGCAACAATCCGG",8,20.16,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","F99C L162F",2
"lib1","SARS-CoV-2","TACAGCAAGATAGGCG",2,29.93,10.33,-0.43,0.08,2.93,1.03,0,">1 nonsynonymous","S36L Y50F S200N",3
"lib1","SARS-CoV-2","TACAGCAATTACCCTC",7,137.8,8.49,-2.28,0.15,2.17,1.12,0.01,">1 nonsynonymous","N40Y P54Y C61N G174V",4
"lib1","SARS-CoV-2","TACAGCACAATAATTC",17,15.24,NA,NA,NA,NA,NA,NA,"stop","T55* N92Y S200L",3
"lib1","SARS-CoV-2","TACAGCACCACATAAC",3,0.61,NA,NA,NA,NA,NA,NA,"stop","T85M W106* Q176L S200A",4
"lib1","SARS-CoV-2","TACAGCACGCGATGTA",5,108.69,8.28,-2.48,0.17,2.19,1.1,0.01,">1 nonsynonymous","P96S N157K",2
"lib1","SARS-CoV-2","TACAGCACTAAACTAA",1,27.6,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","D98I C102L R127N Q176T",4
"lib1","SARS-CoV-2","TACAGCACTCTGACTA",3,61.22,8.87,-1.89,0.11,1.91,1.18,0,">1 nonsynonymous","S43L Q84F D90S L187Y C195K K199M",6
"lib1","SARS-CoV-2","TACAGCACTTAATTAC",8,65.18,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K48Q S108Y C150N",3
"lib1","SARS-CoV-2","TACAGCAGACCCTAGC",2,113.14,10.77,0.01,0.06,2.87,1.05,0,">1 nonsynonymous","T3L S41E P197L",3
"lib1","SARS-CoV-2","TACAGCAGTCCACAAT",4,7.56,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","T85N Y121T G152V",3
"lib1","SARS-CoV-2","TACAGCATCCGGATAT",5,36.68,10.7,-0.06,0.08,2.91,1.05,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","TACAGCATTGAAACAA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","R78*",1
"lib1","SARS-CoV-2","TACAGCCAACTACGAT",8,56.73,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S36P G74P",2
"lib1","SARS-CoV-2","TACAGCCCCATAAGCC",2,15.62,6.91,-3.85,0.53,1.5,1,0.05,">1 nonsynonymous","N92T G116W E154I",3
"lib1","SARS-CoV-2","TACAGCCCCGAAATTG",5,1.11,NA,NA,NA,NA,NA,NA,"stop","D98H S139W Y143*",3
"lib1","SARS-CoV-2","TACAGCCGATCCCATA",4,23.95,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G101C C102G D112K",3
"lib1","SARS-CoV-2","TACAGCCGGTAGTAGG",2,33.97,10.71,-0.05,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAGCCTAGGATCGA",1,6.59,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R27K K87L Y91N Y123L Q144R",5
"lib1","SARS-CoV-2","TACAGCGCTTAATGCT",4,15.73,10.62,-0.15,0.1,2.89,1.08,0,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","TACAGCGGAAACGGTA",4,34.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31E C49I A67N Y159D P197D",5
"lib1","SARS-CoV-2","TACAGCGGACCACCTA",4,36.24,10.42,-0.35,0.07,2.94,1.04,0,">1 nonsynonymous","S69Y T201P",2
"lib1","SARS-CoV-2","TACAGCGGAGTGTACA",17,3.41,NA,NA,NA,NA,NA,NA,"stop","F12R R25* P96W D98V G155W",5
"lib1","SARS-CoV-2","TACAGCGTGAAAGAAG",6,53.32,9.69,-1.07,0.1,2.64,1.04,0,">1 nonsynonymous","Y121I E141S A190Y",3
"lib1","SARS-CoV-2","TACAGCTAAATATTGC",2,9.82,6,-4.76,2,1.5,1.1,0.04,"1 nonsynonymous","Y91P",1
"lib1","SARS-CoV-2","TACAGCTAAATCATAA",6,84,9.35,-1.41,0.11,1.78,1.08,0.01,">1 nonsynonymous","A22S L162H",2
"lib1","SARS-CoV-2","TACAGCTCAGGTACCG",4,6.05,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T63P K87Y D90V G155W A190S",5
"lib1","SARS-CoV-2","TACAGCTTAAAAATGC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L N130T E141Y",3
"lib1","SARS-CoV-2","TACAGGAAACTTCAAA",2,25.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L60F I88S",2
"lib1","SARS-CoV-2","TACAGGAATTTGACCA",1,37.19,9.31,-1.45,0.09,2.78,1.07,0,">1 nonsynonymous","C61S G146Q",2
"lib1","SARS-CoV-2","TACAGGACACTTACTA",6,123.53,9.83,-0.94,0.08,2.63,1.04,0,"1 nonsynonymous","C6P",1
"lib1","SARS-CoV-2","TACAGGACGCTAATCT",2,1.17,NA,NA,NA,NA,NA,NA,"stop","I142T G166*",2
"lib1","SARS-CoV-2","TACAGGACTACCGCCA",1,1.38,NA,NA,NA,NA,NA,NA,"stop","N4* T100I",2
"lib1","SARS-CoV-2","TACAGGAGAACACAAA",8,244.56,10.75,-0.02,0.07,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAGGAGCCCTAACA",2,5.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T Y93E",2
"lib1","SARS-CoV-2","TACAGGCAGATAGTTC",13,151.4,10.76,0,0.07,2.92,1.06,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","TACAGGCATATCTTAA",10,2.86,NA,NA,NA,NA,NA,NA,"stop","P82Y S108* L125C Y143C",4
"lib1","SARS-CoV-2","TACAGGCATCCTTCGT",1,17.5,10.68,-0.09,0.12,2.94,1.08,0.01,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","TACAGGCCAAATGAAT",5,28.53,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","I2F T46H R73A A105P",4
"lib1","SARS-CoV-2","TACAGGCCACCCACAT",4,758.88,9.13,-1.63,0.06,2.83,1.08,0,">1 nonsynonymous","S19P T170R",2
"lib1","SARS-CoV-2","TACAGGCCTACTAGTC",6,75.42,10.11,-0.65,0.1,2.56,1.03,0,"1 nonsynonymous","C49F",1
"lib1","SARS-CoV-2","TACAGGCCTATCCTGA",1,11.89,6.56,-4.2,0.56,1.5,1.02,0.01,">1 nonsynonymous","C6W A33V Q144I P149Y N157F H189N T201V",7
"lib1","SARS-CoV-2","TACAGGCTAAAGAATC",1,95.3,10.72,-0.04,0.04,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAGGGATGAACAAG",1,44.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D97Y Y143G L162T",3
"lib1","SARS-CoV-2","TACAGGGCCAAAACAA",11,107.35,10.78,0.02,0.08,2.88,1.08,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","TACAGGGTCAGAAATG",6,43.19,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C31H F134S I142C",3
"lib1","SARS-CoV-2","TACAGGTAAATAGTCC",2,12.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50S L95P",2
"lib1","SARS-CoV-2","TACAGGTAACGGACAT",4,30.89,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","Y91R K128T C158M T201R",4
"lib1","SARS-CoV-2","TACAGTAATGAAGCCG",1,20.86,8.18,-2.58,0.35,1.5,1,0.04,">1 nonsynonymous","I88C S147A P191F",3
"lib1","SARS-CoV-2","TACAGTAATTGGGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","TACAGTACAAAAAAAT",4,99.03,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44R T148Q G172T",3
"lib1","SARS-CoV-2","TACAGTACCCGGCTGC",4,25.09,10.19,-0.58,0.13,2.85,1.08,0.01,">1 nonsynonymous","F8L S41H",2
"lib1","SARS-CoV-2","TACAGTACGAACGTAA",3,50.48,10.75,-0.01,0.09,2.93,1.04,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TACAGTACGTCCTAGT",2,30.29,7.39,-3.37,0.26,1.5,1.09,0.02,">1 nonsynonymous","V11W W23G P197T",3
"lib1","SARS-CoV-2","TACAGTATAATCTTAA",7,22.52,10.73,-0.04,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAGTATATAATCAA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M D59V N92L F156D",4
"lib1","SARS-CoV-2","TACAGTCAACCGGAAC",2,119.07,6,-4.76,2,1.5,1.21,0.03,"1 nonsynonymous","I72K",1
"lib1","SARS-CoV-2","TACAGTCATAAATCGT",3,9.32,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","E10F F70A D90Q",3
"lib1","SARS-CoV-2","TACAGTCCATAATTCT",3,26.19,10.65,-0.12,0.08,2.86,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACAGTCCCACCCATA",3,65.89,10.75,-0.01,0.07,2.93,1.02,0,">1 nonsynonymous","N40H P197T",2
"lib1","SARS-CoV-2","TACAGTCCGAACTTAC",2,24.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D34S S41E Y121S G146R S164V",5
"lib1","SARS-CoV-2","TACAGTCCTGGTGAGC",9,102.03,8.83,-1.93,0.19,1.5,1.09,0.02,">1 nonsynonymous","G51W F62C P149L",3
"lib1","SARS-CoV-2","TACAGTCTAAATACGC",6,119.46,9.78,-0.99,0.11,2.49,1.05,0,">1 nonsynonymous","V32S Q144L",2
"lib1","SARS-CoV-2","TACAGTCTACAAACAT",1,18.08,10.66,-0.1,0.06,2.95,1,0,">1 nonsynonymous","G9E V173C",2
"lib1","SARS-CoV-2","TACAGTCTCTAAAGCG",2,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D A42Y S53M W106S",4
"lib1","SARS-CoV-2","TACAGTCTGTGTTACT",3,132.8,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","E76G Y175T",2
"lib1","SARS-CoV-2","TACAGTGCGCTACTCG",3,24.58,10.53,-0.23,0.1,2.82,1.05,0,">1 nonsynonymous","T100L T140H E154N",3
"lib1","SARS-CoV-2","TACAGTGCTTCGACAA",8,107.01,6.39,-4.38,0.5,1.5,1.17,0.02,">1 nonsynonymous","L5I Y66E V77S S113E N120F",5
"lib1","SARS-CoV-2","TACAGTTAAGACAATA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","V77F L122W N130R I142*",4
"lib1","SARS-CoV-2","TACAGTTAATATCAGT",1,27.06,6,-4.76,1.73,1.5,1.14,0.01,">1 nonsynonymous","S29T N64V C150Q G172V",4
"lib1","SARS-CoV-2","TACAGTTATCTTGTTA",10,85.15,9.92,-0.84,0.12,1.82,1.08,0,">1 nonsynonymous","S41M A89I L122R S147F",4
"lib1","SARS-CoV-2","TACAGTTCACACATCT",7,199.86,10.7,-0.07,0.06,2.91,1.04,0,">1 nonsynonymous","P149Y V173R",2
"lib1","SARS-CoV-2","TACAGTTCTCGTCCCT",5,42.37,10.64,-0.12,0.05,2.95,1,0,"1 nonsynonymous","P133S",1
"lib1","SARS-CoV-2","TACAGTTTAAAACTCC",5,58.83,6.36,-4.41,0.55,1.5,1.22,0.02,">1 nonsynonymous","G117K G146F",2
"lib1","SARS-CoV-2","TACATAAAATCTCCAT",7,85.99,10.67,-0.1,0.06,2.86,1.09,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","TACATAAAGAATGCCT",3,21.95,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A81V L111V I142K F167N",4
"lib1","SARS-CoV-2","TACATAAAGAGGAGAA",10,2.38,NA,NA,NA,NA,NA,NA,"stop","G9* F99K P133Y E141D",4
"lib1","SARS-CoV-2","TACATAAATAGAAGAT",3,6.55,10.7,-0.07,0.21,2.63,1.23,0.04,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TACATAAATTCCTGGA",4,98.28,10.76,-0.01,0.08,2.93,1.04,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","TACATAACAATTCGAA",4,58.65,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N64E N107D F126E R136L",4
"lib1","SARS-CoV-2","TACATAACACATGGGG",1,16.28,6,-4.76,2,3,1.05,0,">1 nonsynonymous","N58D A81F L95H N107H Y143L Q176L",6
"lib1","SARS-CoV-2","TACATAACACCTCACG",6,0.49,NA,NA,NA,NA,NA,NA,"stop","P54H V77* L95W W106G L122W",5
"lib1","SARS-CoV-2","TACATAACAGCCACCA",6,106.41,8.37,-2.4,0.13,2.16,1.14,0.01,">1 nonsynonymous","D90L N157T",2
"lib1","SARS-CoV-2","TACATAACAGTGACAA",1,17.14,8.15,-2.61,0.11,2.34,1.02,0,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","TACATAACCTATTGCA",1,32.87,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","A33M K87S N151V Y175M",4
"lib1","SARS-CoV-2","TACATAACTAGAAACT",4,96.67,9.35,-1.42,0.1,2.6,1.11,0,">1 nonsynonymous","T55E I142Y P161A",3
"lib1","SARS-CoV-2","TACATAAGCGTCTCTA",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T K56I T100E E141T",4
"lib1","SARS-CoV-2","TACATAAGGAGAGACA",14,260.12,10.68,-0.09,0.03,2.93,1.02,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","TACATAATATAAACCG",7,68.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82N C102S L188N",3
"lib1","SARS-CoV-2","TACATAATATGTGTTA",5,8.01,6.46,-4.3,0.51,1.5,1.11,0.02,">1 nonsynonymous","A14E S43D L60R V71E R73Q K87T",6
"lib1","SARS-CoV-2","TACATAATATTAGGGC",1,9.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G101R L162M",2
"lib1","SARS-CoV-2","TACATAATTGCTTCCC",6,123.93,9.18,-1.58,0.05,2.8,1.12,0,">1 nonsynonymous","S41F Y119A",2
"lib1","SARS-CoV-2","TACATACACATCCGCT",3,9.02,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y39V C102L G116R E141F N151R P161Y",6
"lib1","SARS-CoV-2","TACATACATAGAATAC",5,72.33,10.34,-0.42,0.04,2.87,1.06,0,">1 nonsynonymous","N1S R16D C61W L188V",4
"lib1","SARS-CoV-2","TACATACCAAGAATGT",2,20.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K94L Y119S S147V Y178R",4
"lib1","SARS-CoV-2","TACATACCACTAGACA",4,18.72,8.13,-2.63,0.28,1.5,1.06,0.04,">1 nonsynonymous","G83W D137E",2
"lib1","SARS-CoV-2","TACATACCGTCTACAT",1,41.15,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","P82L D112F E154T G166T G174A",5
"lib1","SARS-CoV-2","TACATACGGACCCACT",2,16.83,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N64H F99D G116P R124A N171T",5
"lib1","SARS-CoV-2","TACATACGGTTTGAAG",1,12.85,10.76,-0.01,0.19,2.57,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACATACGTCTCTAGC",8,4.95,NA,NA,NA,NA,NA,NA,"stop","T15E A33G K48* Y119C L131*",5
"lib1","SARS-CoV-2","TACATACGTTCACTTT",10,129.78,10.74,-0.03,0.08,2.88,1.1,0,"1 nonsynonymous","N1H",1
"lib1","SARS-CoV-2","TACATACTAATATACA",1,30.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N64R K94Y S139K C150A C158L K199V",6
"lib1","SARS-CoV-2","TACATACTACAGATCG",9,40.79,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S29L C49E",2
"lib1","SARS-CoV-2","TACATACTCCAGTATA",2,33.56,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N40R N92R F99A Y119G C158F",5
"lib1","SARS-CoV-2","TACATACTTCACTACA",2,66.67,10.61,-0.15,0.06,2.88,1.03,0,">1 nonsynonymous","T3K F47I",2
"lib1","SARS-CoV-2","TACATACTTGCAATTA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","C61K G117K R127* P149S",4
"lib1","SARS-CoV-2","TACATACTTGGTACTA",10,154.6,10.23,-0.53,0.03,2.85,1.04,0,">1 nonsynonymous","S45D Y66A I142L",3
"lib1","SARS-CoV-2","TACATAGAAAACGTTT",1,5.39,10.75,-0.01,0.42,1.56,1.09,0.08,">1 nonsynonymous","D34T Y178S",2
"lib1","SARS-CoV-2","TACATAGAAGAAACCT",2,23.53,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F44I V103L I138F",3
"lib1","SARS-CoV-2","TACATAGAATAGTTTA",4,18.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y A81F E141L",3
"lib1","SARS-CoV-2","TACATAGAATGTAAGT",2,13.03,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D68R D90S",2
"lib1","SARS-CoV-2","TACATAGACACAGACG",3,0.29,NA,NA,NA,NA,NA,NA,"stop","V11P A22E D59* R78H G101I K128R Q144V",7
"lib1","SARS-CoV-2","TACATAGCATACAAAA",1,54.21,10.82,0.06,0.07,2.87,1.1,0,">1 nonsynonymous","S43F N64T",2
"lib1","SARS-CoV-2","TACATAGCGCACAACA",5,63.36,10.66,-0.1,0.04,2.95,1,0,">1 nonsynonymous","N40S N64R",2
"lib1","SARS-CoV-2","TACATAGCTTACAACT",2,0.54,NA,NA,NA,NA,NA,NA,"stop","I80* Y119P E141R F156T T170K",5
"lib1","SARS-CoV-2","TACATAGGAAGCTTTC",1,35.07,9.81,-0.96,0.12,2.46,1.08,0.01,">1 nonsynonymous","C6S A14N L122N",3
"lib1","SARS-CoV-2","TACATAGGACTAAGTA",3,11.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L95R G117F",2
"lib1","SARS-CoV-2","TACATAGGTACCCAAT",1,8.51,8.07,-2.69,0.98,3,1,0.02,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","TACATAGTGATCAAAT",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K L125Y",2
"lib1","SARS-CoV-2","TACATAGTTCAAACAG",6,33.68,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L60A N92K D137T",3
"lib1","SARS-CoV-2","TACATATAAAAGGGAT",5,76.91,9.58,-1.19,0.11,2.1,1.09,0,">1 nonsynonymous","V11Y N107A",2
"lib1","SARS-CoV-2","TACATATAAATGCATA",4,17.91,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7F R179N",2
"lib1","SARS-CoV-2","TACATATACAAATAGA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","C6M L60P S129R G146* G172I",5
"lib1","SARS-CoV-2","TACATATACTAGAGAG",1,12.95,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","D112K T140R T201R",3
"lib1","SARS-CoV-2","TACATATACTGTCACA",1,14.23,10.68,-0.09,0.13,2.86,1.01,0.01,">1 nonsynonymous","K128W E154T",2
"lib1","SARS-CoV-2","TACATATAGGTACGCA",5,106.32,10.72,-0.04,0.06,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TACATATCACCATCAA",3,72.63,6,-4.76,2,1.5,1.25,0.05,"1 nonsynonymous","G101M",1
"lib1","SARS-CoV-2","TACATATGCCCCTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","S41L K56S E141*",3
"lib1","SARS-CoV-2","TACATATTATACCGGA",6,53.77,6,-4.76,1.64,1.5,1.17,0.01,">1 nonsynonymous","N1F R16I W23L K48E W106T",5
"lib1","SARS-CoV-2","TACATATTATCTTCTG",7,1.22,NA,NA,NA,NA,NA,NA,"stop","R25T A42D Y91F F134*",4
"lib1","SARS-CoV-2","TACATATTCACATCGG",1,19.08,10.88,0.12,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACATATTCGTACAAA",6,378.76,8.57,-2.19,0.09,2.9,1.06,0,"1 nonsynonymous","Q176E",1
"lib1","SARS-CoV-2","TACATATTTAAAAAAA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","C6R T15H F62W D68G Q168* Y175F",6
"lib1","SARS-CoV-2","TACATATTTCACAACG",1,26.42,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","R27V A89R S113V G146A",4
"lib1","SARS-CoV-2","TACATATTTTTCCACT",10,226.72,10.8,0.03,0.07,2.89,1.07,0,">1 nonsynonymous","L5Q V37W",2
"lib1","SARS-CoV-2","TACATATTTTTGGGAA",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L A42I S53I L95Y G116P R124L Q168P V173M G196D",9
"lib1","SARS-CoV-2","TACATCAACGAATAGG",8,210.01,8.24,-2.53,0.13,2.35,1.08,0.01,">1 nonsynonymous","T15D L122S C158R",3
"lib1","SARS-CoV-2","TACATCAAGTGATTCA",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C K87T G155C",3
"lib1","SARS-CoV-2","TACATCACAAAAAGGG",1,31.91,10.27,-0.5,0.07,2.87,1.05,0,">1 nonsynonymous","V37I K48H S129F",3
"lib1","SARS-CoV-2","TACATCACCCAAACCT",2,57.95,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9E L131Y G172A P177L",4
"lib1","SARS-CoV-2","TACATCATACGTCCTA",4,48.97,8.52,-2.24,0.14,2.27,1.07,0.01,">1 nonsynonymous","G116H N157R",2
"lib1","SARS-CoV-2","TACATCATGAAATCCC",5,33.78,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37H V52S K114T F134L V182H",5
"lib1","SARS-CoV-2","TACATCCACAGGCTTA",2,137.44,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48L G83V N130S N157L Y178H K199M",6
"lib1","SARS-CoV-2","TACATCCACTAGCAAA",2,43.71,10.77,0,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACATCCATGAGACTA",2,33.91,6,-4.76,2,3,1.14,0,">1 nonsynonymous","Y50V Y91N D98N D112M N151F",5
"lib1","SARS-CoV-2","TACATCCCATCAGAAG",4,1.4,NA,NA,NA,NA,NA,NA,"stop","N40* L57S V71A",3
"lib1","SARS-CoV-2","TACATCCCTATGTTGG",6,22.59,7.34,-3.43,0.4,1.5,1.06,0.03,">1 nonsynonymous","P133L N171R",2
"lib1","SARS-CoV-2","TACATCCCTCCTAATT",8,34.57,7.32,-3.44,0.37,1.5,1.1,0.04,">1 nonsynonymous","I28G W106R",2
"lib1","SARS-CoV-2","TACATCCCTCGTCTTG",2,88.06,9.83,-0.94,0.06,2.72,1.07,0,">1 nonsynonymous","R27W G174Y",2
"lib1","SARS-CoV-2","TACATCCGAACAATGA",3,8.36,8.05,-2.71,0.51,1.5,1.01,0.07,">1 nonsynonymous","T3D N92K P169Y V180R",4
"lib1","SARS-CoV-2","TACATCCGAATCCTTA",1,5.31,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A33G S45V I72M P82K V182G T201K",6
"lib1","SARS-CoV-2","TACATCCGCGCCCCCG",4,5.8,NA,NA,NA,NA,NA,NA,"stop","Y35K C61* P149Y F156M",4
"lib1","SARS-CoV-2","TACATCCTGACATAAC",2,17.67,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y50S K56A N107S",3
"lib1","SARS-CoV-2","TACATCCTTAAGTTTT",2,18.71,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y93F A105R",2
"lib1","SARS-CoV-2","TACATCCTTCGAACTT",5,35.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25C Y35N C61L G166L",4
"lib1","SARS-CoV-2","TACATCGACTACTTAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","K26E P54E N64V Y165*",4
"lib1","SARS-CoV-2","TACATCGATGTTATAT",8,5.47,NA,NA,NA,NA,NA,NA,"stop","T55* K199L",2
"lib1","SARS-CoV-2","TACATCGCAAAGAGTT",6,149.07,6,-4.76,1.75,1.5,1.14,0.01,">1 nonsynonymous","L5N Y119K Y175L",3
"lib1","SARS-CoV-2","TACATCGGTTATATAT",1,2.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TACATCGTATTACTTT",1,19.45,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","L95P N107V L122A R179W",4
"lib1","SARS-CoV-2","TACATCTCACCTGTCG",9,104.69,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17S Y119R Y175N",3
"lib1","SARS-CoV-2","TACATCTCGCACGGGT",4,40.65,10.29,-0.48,0.07,2.85,1,0,">1 nonsynonymous","N13A T55N G196A",3
"lib1","SARS-CoV-2","TACATCTTATAAACCT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M I104C T140I",3
"lib1","SARS-CoV-2","TACATCTTGCATTAAA",2,23.66,7.18,-3.59,0.36,1.5,1.14,0.03,">1 nonsynonymous","V103L N118D",2
"lib1","SARS-CoV-2","TACATGAAACTGCTCA",1,82.9,10.54,-0.22,0.13,2.84,1.05,0,">1 nonsynonymous","V37A L60D",2
"lib1","SARS-CoV-2","TACATGACAAATATTT",2,102.5,8.83,-1.94,0.07,2.9,1.06,0,">1 nonsynonymous","T100M N157T",2
"lib1","SARS-CoV-2","TACATGACAGAATGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q79* Y91N F134E",3
"lib1","SARS-CoV-2","TACATGACCTGAATAT",2,14.06,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D98F V103L",2
"lib1","SARS-CoV-2","TACATGACGCGAAAAT",1,0.78,NA,NA,NA,NA,NA,NA,"stop","Y21K D75K P96M E135*",4
"lib1","SARS-CoV-2","TACATGAGAAACCCTA",3,36.78,10.66,-0.11,0.05,2.9,1.04,0,">1 nonsynonymous","N4Y L95I",2
"lib1","SARS-CoV-2","TACATGATAGTGGAAA",5,25.05,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F99S G172L",2
"lib1","SARS-CoV-2","TACATGATGATAGAAA",4,20.9,10.87,0.1,0.06,2.96,1.02,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","TACATGATGATAGATA",2,2.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71E",1
"lib1","SARS-CoV-2","TACATGCAATAGCAAT",3,20.68,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F8L N13S S19M G86A N120R",5
"lib1","SARS-CoV-2","TACATGCACCGGTACA",5,97.32,10.23,-0.53,0.06,2.81,1.04,0,"1 nonsynonymous","Y50H",1
"lib1","SARS-CoV-2","TACATGCATGGTCTCT",6,83.79,9.74,-1.02,0.09,1.97,1.09,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","TACATGCCATACATAT",5,73.47,10.64,-0.13,0.04,2.86,1.05,0,">1 nonsynonymous","I2P T193I",2
"lib1","SARS-CoV-2","TACATGCCTCTACTTC",7,106.86,9.17,-1.6,0.09,2.75,1.13,0,">1 nonsynonymous","N1I V32F G166V",3
"lib1","SARS-CoV-2","TACATGCGAAAAGAAC",6,34.5,6,-4.76,2,1.5,1.36,0.04,">1 nonsynonymous","W23L F44L F99M",3
"lib1","SARS-CoV-2","TACATGCTAACCATGC",1,2.93,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TACATGCTGTAGCAAA",2,0.26,NA,NA,NA,NA,NA,NA,"stop","A89W G116*",2
"lib1","SARS-CoV-2","TACATGGAATAATAGG",2,48.93,10.78,0.02,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TACATGGAATCGATGG",9,5.85,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib1","SARS-CoV-2","TACATGGAATGGTGAG",2,31.26,8.48,-2.28,0.16,1.5,1.19,0.01,">1 nonsynonymous","A22W V37R D59S R127S",4
"lib1","SARS-CoV-2","TACATGGACAGATACT",1,102.61,10.17,-0.6,0.07,2.81,1,0,"1 nonsynonymous","D34A",1
"lib1","SARS-CoV-2","TACATGGATATGTTAC",4,1.87,NA,NA,NA,NA,NA,NA,"stop","I2Y K56* L188T",3
"lib1","SARS-CoV-2","TACATGGCCTAACAAA",3,39.14,8.35,-2.41,0.25,1.55,1.17,0.02,">1 nonsynonymous","G9W V77F K87R Q168R A192T",5
"lib1","SARS-CoV-2","TACATGGTGACGCCTT",8,127.24,9.96,-0.8,0.08,2.41,1.09,0,">1 nonsynonymous","A18S S41K R124K P197L",4
"lib1","SARS-CoV-2","TACATGGTTCTAACAA",3,79.98,10.81,0.04,0.09,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACATGTATTCATAAA",3,41.75,10.79,0.02,0.09,2.91,1.04,0,"1 nonsynonymous","N40D",1
"lib1","SARS-CoV-2","TACATGTCACGAAACG",2,2.08,NA,NA,NA,NA,NA,NA,"stop","G83D V115* R179T",3
"lib1","SARS-CoV-2","TACATGTCATGATTAA",11,115.75,6.55,-4.22,0.35,1.5,1.14,0.01,">1 nonsynonymous","G86Q F156D",2
"lib1","SARS-CoV-2","TACATTAAAAAACATG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","I104* L183E S200P",3
"lib1","SARS-CoV-2","TACATTAAAACCGATG",5,186.75,9.17,-1.59,0.06,2.89,1.1,0,">1 nonsynonymous","S113T Y175F",2
"lib1","SARS-CoV-2","TACATTAAAGCCAAGT",5,60.21,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6D S19M Y119T P149S T170R",5
"lib1","SARS-CoV-2","TACATTAAGCATACAG",4,100.23,10.49,-0.28,0.04,2.89,1.02,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","TACATTACCTCCTAAG",3,27.08,6.17,-4.59,0.76,1.5,1.11,0.03,">1 nonsynonymous","N92T W106S",2
"lib1","SARS-CoV-2","TACATTACGAAATCGC",2,18.03,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G9D C49W D112G",3
"lib1","SARS-CoV-2","TACATTACTTGGCAAG",9,93,9.77,-0.99,0.1,2.34,1.11,0,">1 nonsynonymous","Y91R F160P",2
"lib1","SARS-CoV-2","TACATTAGAAGTCCAT",1,26.29,9.83,-0.94,0.2,1.84,1.12,0.01,"1 nonsynonymous","V65E",1
"lib1","SARS-CoV-2","TACATTAGACGCCAAT",12,0.7,NA,NA,NA,NA,NA,NA,"stop","F12C N40* T55W G116D",4
"lib1","SARS-CoV-2","TACATTAGAGTTTTGT",5,8.58,6.12,-4.64,1.52,1.5,1.23,0.06,">1 nonsynonymous","N120L P161L R179Y",3
"lib1","SARS-CoV-2","TACATTAGGAATCTTG",8,118.29,10.8,0.04,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACATTAGGGAATCCC",2,12.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R16S P54H A81F V115C L122F R127L T201D",7
"lib1","SARS-CoV-2","TACATTATAGATATAA",2,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L V52M E141M P149C",4
"lib1","SARS-CoV-2","TACATTATGATGCGTA",5,1.2,NA,NA,NA,NA,NA,NA,"stop","C6D G101E D112* D137L G152P",5
"lib1","SARS-CoV-2","TACATTATTATCATCG",1,5.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4L S53F P96R N107R",4
"lib1","SARS-CoV-2","TACATTCAAATAGAAC",7,66.06,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6I F44A I138T C150A T201G",5
"lib1","SARS-CoV-2","TACATTCAATACATAG",3,33.11,8.51,-2.25,0.13,2.07,1.19,0.01,">1 nonsynonymous","Y66L P161T",2
"lib1","SARS-CoV-2","TACATTCAATATACCC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","A14* Q84N I104M N157I",4
"lib1","SARS-CoV-2","TACATTCACACTAAAC",9,112.34,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","A89F Y119L S139F",3
"lib1","SARS-CoV-2","TACATTCATTTCAGAG",1,6.66,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G83P D98E",2
"lib1","SARS-CoV-2","TACATTCCATCTTCTT",7,93.51,6,-4.76,2,2.91,1.17,0,">1 nonsynonymous","F126T S147C R179K",3
"lib1","SARS-CoV-2","TACATTCCGAATTCTG",5,75.75,10.65,-0.12,0.04,2.92,1.02,0,"1 nonsynonymous","E141I",1
"lib1","SARS-CoV-2","TACATTCCTATCGACA",5,2.05,NA,NA,NA,NA,NA,NA,"stop","L5W G155*",2
"lib1","SARS-CoV-2","TACATTCGAATGAGTA",2,71.61,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V32S F99M V115D R124L Y175H",5
"lib1","SARS-CoV-2","TACATTCGACCTATGT",2,0.29,NA,NA,NA,NA,NA,NA,"stop","D75M F167*",2
"lib1","SARS-CoV-2","TACATTGAGTAGTCCA",6,21.78,7.5,-3.26,0.35,1.5,1.11,0.03,">1 nonsynonymous","V11C L57P T63H Y121F T140Q",5
"lib1","SARS-CoV-2","TACATTGATAACAACT",2,8.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11Y A18T A105L S200W",4
"lib1","SARS-CoV-2","TACATTGATAGGGGGT",2,181.6,6.17,-4.6,0.55,1.5,1.18,0.01,">1 nonsynonymous","R27G C61T Y175V",3
"lib1","SARS-CoV-2","TACATTGATTACGGGA",1,18.25,8.93,-1.84,0.34,2.13,1,0.05,">1 nonsynonymous","F70L Y91M Y165G",3
"lib1","SARS-CoV-2","TACATTGCACATTATT",5,37.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6M V71P K87I L122E V173C",5
"lib1","SARS-CoV-2","TACATTGCATCCGTTA",11,79.44,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T15F Y93G I142L",3
"lib1","SARS-CoV-2","TACATTGCCCGAAACC",1,21.18,8.21,-2.56,0.44,1.5,1.22,0.07,">1 nonsynonymous","N107I S184W K199Y",3
"lib1","SARS-CoV-2","TACATTGCCGAGAAAG",1,26.51,10.55,-0.21,0.1,2.91,1.08,0.01,">1 nonsynonymous","N130K V173N",2
"lib1","SARS-CoV-2","TACATTGCGAAAAGTT",2,62.42,8.66,-2.1,0.26,1.5,1.07,0.03,">1 nonsynonymous","Y39I T63A Y91S F185Y",4
"lib1","SARS-CoV-2","TACATTGCGAATATTT",7,38.23,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","P7S I88L W106L F134R",4
"lib1","SARS-CoV-2","TACATTGCTACCTCGC",2,11.96,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","D34R G86M D98C A105P",4
"lib1","SARS-CoV-2","TACATTGCTTGATTAC",9,89.96,9.77,-0.99,0.06,2.87,1.03,0,">1 nonsynonymous","L125V N130C E141R",3
"lib1","SARS-CoV-2","TACATTGGACAAACTC",5,62.83,8.97,-1.79,0.07,2.51,1.09,0,">1 nonsynonymous","V37Y F47V D90K E141Q T170H",5
"lib1","SARS-CoV-2","TACATTGGTAAATACG",3,0,NA,NA,NA,NA,NA,NA,"stop","D90* K132L T148I",3
"lib1","SARS-CoV-2","TACATTGTAAAGAACT",4,98.61,10.68,-0.09,0.05,2.94,1.04,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","TACATTGTACAACGAA",2,24.27,9.61,-1.15,0.16,2.42,1.04,0.01,">1 nonsynonymous","F8G Y35W E154N",3
"lib1","SARS-CoV-2","TACATTGTGCGCTTAC",15,195.77,10.19,-0.58,0.05,2.64,1.03,0,">1 nonsynonymous","T15V E141Y",2
"lib1","SARS-CoV-2","TACATTGTTGACTGAT",1,2.28,NA,NA,NA,NA,NA,NA,"stop","N4V G83E I104G F126H D137L Q176S K198*",7
"lib1","SARS-CoV-2","TACATTTAAAAATAAA",4,81.53,10.12,-0.64,0.05,2.81,1.01,0,">1 nonsynonymous","Y35M R78L P133S",3
"lib1","SARS-CoV-2","TACATTTAACTATCGA",1,9.33,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","D34G C49F C61N D112P",4
"lib1","SARS-CoV-2","TACATTTAGAACTACA",3,2.33,NA,NA,NA,NA,NA,NA,"stop","I2A A42S G86*",3
"lib1","SARS-CoV-2","TACATTTATAATTGCC",2,10.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L131S A145S A190S C195F",4
"lib1","SARS-CoV-2","TACATTTATACGTTCG",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A D97V",2
"lib1","SARS-CoV-2","TACATTTCCATCGAAG",4,46.21,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A22T V37W I72R N92L",4
"lib1","SARS-CoV-2","TACATTTCGAAATCTC",1,12.2,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","A14I P96F T201M",3
"lib1","SARS-CoV-2","TACATTTGAACAGTAT",1,48.04,10.39,-0.37,0.05,2.94,1.02,0,"1 nonsynonymous","G116V",1
"lib1","SARS-CoV-2","TACATTTGCGCCCAGA",2,55.07,10.62,-0.14,0.06,2.91,1.06,0,">1 nonsynonymous","Y39L G116S",2
"lib1","SARS-CoV-2","TACATTTGGCCGTCAC",5,30.94,7.84,-2.93,0.28,1.5,1.14,0.02,">1 nonsynonymous","T85E S129T L162W",3
"lib1","SARS-CoV-2","TACATTTGTCTCCTTC",5,86.53,10.75,-0.01,0.05,2.93,1.02,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","TACATTTGTTTCACCG",7,118.06,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V65A T100W Y159C",3
"lib1","SARS-CoV-2","TACATTTTACATTTCT",6,2.17,NA,NA,NA,NA,NA,NA,"stop","C61Q D97A C195Q T201*",4
"lib1","SARS-CoV-2","TACATTTTGAACTACA",5,23.01,6,-4.76,1.43,3,1.23,0.01,">1 nonsynonymous","V103A G155S Q163H",3
"lib1","SARS-CoV-2","TACATTTTGAATCCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28S V77* Y123E P133H",4
"lib1","SARS-CoV-2","TACATTTTGATGTATG",6,212.77,9.41,-1.36,0.05,2.86,1.08,0,">1 nonsynonymous","Y119T L131V",2
"lib1","SARS-CoV-2","TACATTTTGCAACGAT",4,17.54,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C61L P82M T85L T201S",4
"lib1","SARS-CoV-2","TACATTTTTGAACCCC",8,94.99,6.01,-4.76,0.8,1.5,1.17,0.01,">1 nonsynonymous","T55S D112R",2
"lib1","SARS-CoV-2","TACATTTTTGACTAAA",8,81.51,10.6,-0.16,0.05,2.94,1.04,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","TACCAAAAAAACTCAG",2,67.37,10.7,-0.07,0.05,2.85,1.1,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","TACCAAAAACCCTCTT",2,14.63,10.13,-0.63,0.08,2.76,1,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","TACCAAAAATCTAATA",4,31.28,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D34R D68A P149L",3
"lib1","SARS-CoV-2","TACCAAAAATTAAAGA",3,1.96,NA,NA,NA,NA,NA,NA,"stop","Y91V Y123*",2
"lib1","SARS-CoV-2","TACCAAAAATTTTCCT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N110M N120* E141D F160P T170F",5
"lib1","SARS-CoV-2","TACCAAAATCCAGCAA",3,67.34,10.15,-0.62,0.07,2.89,1.02,0,">1 nonsynonymous","F44H T55F D98N I142L G174A",5
"lib1","SARS-CoV-2","TACCAAAATGCGCACA",6,123.14,10.06,-0.7,0.07,2.74,1.06,0,">1 nonsynonymous","F44R F160L",2
"lib1","SARS-CoV-2","TACCAAAATTTGCGAT",1,31,10.6,-0.17,0.04,2.95,1.02,0,">1 nonsynonymous","L5D T140V",2
"lib1","SARS-CoV-2","TACCAAAATTTGTAAA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","G174Q K199*",2
"lib1","SARS-CoV-2","TACCAAACGATCCCAA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","R16L S36Q Q144* P149R",4
"lib1","SARS-CoV-2","TACCAAACGTGAAGAC",2,11.26,6,-4.76,1.97,3,1.06,0.01,">1 nonsynonymous","G86F P96M T148V N171G",4
"lib1","SARS-CoV-2","TACCAAACTAATACAA",4,9.28,6.06,-4.71,1.37,1.5,1.12,0.06,">1 nonsynonymous","T3F C61T N107Y",3
"lib1","SARS-CoV-2","TACCAAACTACTGTAA",9,37.84,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R25T Y143G",2
"lib1","SARS-CoV-2","TACCAAACTCCAAGAC",6,4.04,NA,NA,NA,NA,NA,NA,"stop","I28* D98V",2
"lib1","SARS-CoV-2","TACCAAAGAGGAATAC",8,107.78,10.74,-0.02,0.05,2.86,1.06,0,"1 nonsynonymous","E135G",1
"lib1","SARS-CoV-2","TACCAAATATTTAAAT",5,110.29,10.43,-0.34,0.04,2.96,1,0,">1 nonsynonymous","K87L K198M",2
"lib1","SARS-CoV-2","TACCAAATCATCAAAA",6,74.37,10.34,-0.42,0.07,2.87,1.05,0,">1 nonsynonymous","T63D T100A",2
"lib1","SARS-CoV-2","TACCAAATTAAGGCGT",2,15.42,10.41,-0.35,0.06,2.81,1.13,0,">1 nonsynonymous","Y39Q K87N",2
"lib1","SARS-CoV-2","TACCAAATTCTCGAAA",3,34.08,6,-4.76,1.46,3,1.13,0,">1 nonsynonymous","N1P E10R T46F K87N K94C Y121P Y143D R179L",8
"lib1","SARS-CoV-2","TACCAAATTCTTAGAT",6,43.08,10.31,-0.46,0.04,2.88,1.08,0,">1 nonsynonymous","R16T D34E I104L",3
"lib1","SARS-CoV-2","TACCAACAACCATTAG",3,165.6,10.75,-0.01,0.05,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCAACAACTCTTCC",2,59.98,10.84,0.08,0.06,2.96,1.01,0,"1 nonsynonymous","S36T",1
"lib1","SARS-CoV-2","TACCAACACATATTAA",4,0.93,NA,NA,NA,NA,NA,NA,"stop","G86* L95S L122R",3
"lib1","SARS-CoV-2","TACCAACACGTTGCAG",1,14.18,6,-4.76,2,3,1.06,0,">1 nonsynonymous","G74S G101S F156C",3
"lib1","SARS-CoV-2","TACCAACCACTGATAC",2,18.58,10.35,-0.42,0.1,2.82,1.1,0.01,">1 nonsynonymous","V65R L188S",2
"lib1","SARS-CoV-2","TACCAACCAGCTAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Q84Y F99G N107W K114* N118C",5
"lib1","SARS-CoV-2","TACCAACCCCCTCATA",5,124.57,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","C31R K48R L60K P96G Y123C Q176S T201R",7
"lib1","SARS-CoV-2","TACCAACCTCACAGGA",1,12.69,10.64,-0.13,0.1,3,1.01,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","TACCAACCTCCTCGGT",3,27.51,9.49,-1.27,0.17,1.91,1.14,0.02,"1 nonsynonymous","N92A",1
"lib1","SARS-CoV-2","TACCAACGTCCGTAAA",4,41.27,8.35,-2.42,0.18,2.36,1.13,0.01,">1 nonsynonymous","D97L Y119E F185G",3
"lib1","SARS-CoV-2","TACCAACTAGAGTTGA",1,62.31,9.32,-1.45,0.11,2.02,1.11,0,">1 nonsynonymous","A81G L125M L131C G174M",4
"lib1","SARS-CoV-2","TACCAACTGACGACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4T K56*",2
"lib1","SARS-CoV-2","TACCAACTTAGAACCT",4,46.47,9.72,-1.04,0.17,1.83,1.13,0.01,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","TACCAAGAACACATAT",7,27.93,NA,NA,NA,NA,NA,NA,"stop","K87G P197*",2
"lib1","SARS-CoV-2","TACCAAGAATAAGGCA",2,11.55,6.03,-4.74,0.99,1.5,1.11,0.02,">1 nonsynonymous","A18L L60T Y119N T140Y K199Y",5
"lib1","SARS-CoV-2","TACCAAGAATCCTAAA",1,4.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58R",1
"lib1","SARS-CoV-2","TACCAAGCCGATCATT",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V P82M P96H",3
"lib1","SARS-CoV-2","TACCAAGCCTGTAAGC",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","TACCAAGGGCTGTCTG",4,1.85,NA,NA,NA,NA,NA,NA,"stop","S69I N109* E141K S164N N171I",5
"lib1","SARS-CoV-2","TACCAAGTACTGAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","S113T Q176* K198A",3
"lib1","SARS-CoV-2","TACCAAGTATTATTAA",1,49.94,9.01,-1.75,0.06,2.83,1.1,0,">1 nonsynonymous","N64Y D112E L122T Q163K",4
"lib1","SARS-CoV-2","TACCAAGTTACTTTTA",6,50.21,10.85,0.09,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCAATAAATGAGAT",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N A105I G146S N151I L162V R179T",6
"lib1","SARS-CoV-2","TACCAATAATCGAGAG",5,38.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41Y N107C N118D R136M",4
"lib1","SARS-CoV-2","TACCAATACTGGATGA",2,14.6,9.62,-1.14,0.24,1.84,1.04,0.02,">1 nonsynonymous","N1T R136S P169H",3
"lib1","SARS-CoV-2","TACCAATATCCACTAT",6,120.41,10.6,-0.17,0.06,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCAATGCTGTCATG",4,0,NA,NA,NA,NA,NA,NA,"stop","L5* A22D L60V D98I Y119T R136G F160L V180Y",8
"lib1","SARS-CoV-2","TACCAATGGAGATGGC",5,21.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68L N151V",2
"lib1","SARS-CoV-2","TACCAATGGTGGAACC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","TACCAATGTTGATCTG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","A33K S45C D97S Y119M S129*",5
"lib1","SARS-CoV-2","TACCAATTAACTAGTC",11,117.85,10.76,-0.01,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCAATTAGAGATAA",6,28.87,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C49R C61V Y91R",3
"lib1","SARS-CoV-2","TACCAATTCAACCAAA",4,16.37,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A105L G117I P133M V181S",4
"lib1","SARS-CoV-2","TACCAATTCTATCTTA",1,49.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33G S45W N107F G116F Y143D",5
"lib1","SARS-CoV-2","TACCAATTGGCACACA",5,62,10.83,0.06,0.08,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCACAAAACTTAAG",9,41.88,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y21L D98I N107Y G155D",4
"lib1","SARS-CoV-2","TACCACAACGTGCAAG",7,35.55,9.43,-1.33,0.18,1.76,1.09,0.01,">1 nonsynonymous","C61N V103T N110P",3
"lib1","SARS-CoV-2","TACCACACATACCTGA",3,53.45,10.73,-0.04,0.05,2.94,1.03,0,">1 nonsynonymous","T55W F62L K128S",3
"lib1","SARS-CoV-2","TACCACACCAAAAAAG",1,8.39,8.26,-2.5,0.31,1.97,1.15,0.03,">1 nonsynonymous","L5M Y50M P169Q P197T",4
"lib1","SARS-CoV-2","TACCACACGCTAAATC",1,8.31,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","V153L R179Y K198M",3
"lib1","SARS-CoV-2","TACCACACGTATACCA",7,91.29,10.22,-0.54,0.06,2.77,1.04,0,">1 nonsynonymous","T3S P133A T140W",3
"lib1","SARS-CoV-2","TACCACAGCAAACCAC",6,11.59,6,-4.76,1.77,1.5,1.12,0.06,">1 nonsynonymous","A14P G83E Y143S G174Q",4
"lib1","SARS-CoV-2","TACCACCAGAGTGACA",1,42.17,6.92,-3.84,0.36,1.5,1.11,0.03,">1 nonsynonymous","G9M Y119L A145L",3
"lib1","SARS-CoV-2","TACCACCAGCGCCAAT",3,30.01,6,-4.76,1.71,1.5,1.13,0.02,">1 nonsynonymous","I72K L162Q E186Y",3
"lib1","SARS-CoV-2","TACCACCCAACAAGGC",5,0.53,NA,NA,NA,NA,NA,NA,"stop","G9* Y50R V77L Y93C T193Y V194G",6
"lib1","SARS-CoV-2","TACCACCCCTTTAATT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","Y35V L57G I72F G83Y L131*",5
"lib1","SARS-CoV-2","TACCACCGAGGAATAG",5,26.26,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2W I80K I104W",3
"lib1","SARS-CoV-2","TACCACCGATTGGTGT",12,73.93,6.23,-4.53,0.72,1.5,1.21,0.02,">1 nonsynonymous","G9F C49S D97N",3
"lib1","SARS-CoV-2","TACCACCGCCGCAATC",3,25.27,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A81H L95T V103N G117D",4
"lib1","SARS-CoV-2","TACCACCTACAATCTT",3,25.77,11.04,0.27,0.14,2.92,1,0.01,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","TACCACCTTCGATACA",5,64.62,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51M V77E Q84K Y91L I142L",5
"lib1","SARS-CoV-2","TACCACGAATAGCCAT",3,8.8,6.29,-4.47,0.85,1.5,1.15,0.01,">1 nonsynonymous","N1V L95E V181R",3
"lib1","SARS-CoV-2","TACCACGAGCACACAT",3,63.58,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Q144R N157Y P169T",3
"lib1","SARS-CoV-2","TACCACGCAAACGTTG",17,27.06,8.21,-2.56,0.24,2.46,1.08,0.03,">1 nonsynonymous","A33S V103L N107G P197L",4
"lib1","SARS-CoV-2","TACCACGCTACAACCC",12,8.85,NA,NA,NA,NA,NA,NA,"stop","S19* L122A Q163S",3
"lib1","SARS-CoV-2","TACCACGCTATTGTGA",3,54.6,6.54,-4.22,0.46,1.5,1.24,0.03,">1 nonsynonymous","T85R D97S C150A",3
"lib1","SARS-CoV-2","TACCACGCTCCCTGGC",3,22.6,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D59V V71L P96D S129P Q168T",5
"lib1","SARS-CoV-2","TACCACGCTGGTCAAA",8,118.17,8.68,-2.08,0.09,2.76,1.09,0,"1 nonsynonymous","S113Q",1
"lib1","SARS-CoV-2","TACCACGGATGCAACA",4,27.96,9.55,-1.22,0.16,1.66,1.06,0.01,">1 nonsynonymous","P7V A33N F47I D97A",4
"lib1","SARS-CoV-2","TACCACGTAGTTTTTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","T55* V103C T148P V182S",4
"lib1","SARS-CoV-2","TACCACGTATGACTAT",7,126,10.49,-0.27,0.05,2.83,1.03,0,">1 nonsynonymous","K132V T140L T148L T201K",4
"lib1","SARS-CoV-2","TACCACGTCGAAATCC",5,123.96,10.04,-0.73,0.04,2.89,1.02,0,">1 nonsynonymous","G9W A67I K87N",3
"lib1","SARS-CoV-2","TACCACTACTACCATA",3,54.4,9.51,-1.25,0.12,1.8,1.08,0.01,"1 nonsynonymous","R127L",1
"lib1","SARS-CoV-2","TACCACTCACACACTA",3,17.42,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Q79S G101L A192T S200A",4
"lib1","SARS-CoV-2","TACCACTCAGAATATA",2,19.96,7.21,-3.56,0.32,1.5,1,0.03,">1 nonsynonymous","S36P T63S N107L",3
"lib1","SARS-CoV-2","TACCACTCAGATATAT",4,29.62,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","G83M A105K N120Y L131K G146W C158V",6
"lib1","SARS-CoV-2","TACCACTCTAAAATAC",4,179.01,10.75,-0.02,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCACTGGTGAAACC",6,156.99,10.2,-0.57,0.05,2.94,1,0,">1 nonsynonymous","F126M G155L Q168H",3
"lib1","SARS-CoV-2","TACCACTTAGCTCTAC",2,27.86,10.01,-0.76,0.11,2.12,1.03,0,">1 nonsynonymous","T15Q D34R",2
"lib1","SARS-CoV-2","TACCACTTGCTTATTT",2,5.52,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L60Y D68N A81V A105N",4
"lib1","SARS-CoV-2","TACCACTTTAATTGAC",2,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A Y91M C158V",3
"lib1","SARS-CoV-2","TACCACTTTAGTCTCT",8,86.62,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35S F44S D97L N120D G146V G172K",6
"lib1","SARS-CoV-2","TACCAGAAAGCTACCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63R G86T Y91S V103M",4
"lib1","SARS-CoV-2","TACCAGAACAAAAACA",1,21.35,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S19E R124L I142R",3
"lib1","SARS-CoV-2","TACCAGAAGATAGCCG",2,43.14,10.39,-0.38,0.04,2.9,1,0,">1 nonsynonymous","N13L R27K",2
"lib1","SARS-CoV-2","TACCAGAATCAATATT",4,59.01,8.79,-1.97,0.23,1.5,1.07,0.02,">1 nonsynonymous","S29F A42T D59Y N120L T140S P191I",6
"lib1","SARS-CoV-2","TACCAGATACCAATAT",12,104.89,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","S69L I88D",2
"lib1","SARS-CoV-2","TACCAGATAGGTATGC",5,118.07,6.01,-4.75,0.56,1.5,1.16,0,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","TACCAGATATCGCGCC",3,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M N64L T85L",3
"lib1","SARS-CoV-2","TACCAGCAGTATGAAG",24,311.03,10.63,-0.13,0.04,2.89,1.05,0,"1 nonsynonymous","V52Y",1
"lib1","SARS-CoV-2","TACCAGCATCTATTCT",7,2.12,NA,NA,NA,NA,NA,NA,"stop","T15D A33* L95N D112* F134R",5
"lib1","SARS-CoV-2","TACCAGCCAAAACCAC",5,32.68,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y50I R136A F160S",3
"lib1","SARS-CoV-2","TACCAGCCATCTCTAT",1,18.34,10.37,-0.39,0.07,2.87,1.02,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TACCAGCCTAGTTGCG",4,61.78,10.82,0.05,0.09,2.89,1.08,0,"1 nonsynonymous","N130A",1
"lib1","SARS-CoV-2","TACCAGCCTCTCTGGG",2,198.11,10.17,-0.6,0.05,2.74,1.03,0,">1 nonsynonymous","Q84L L122N S129M",3
"lib1","SARS-CoV-2","TACCAGCTACCTAAGT",9,27.33,8.85,-1.91,0.17,1.57,1.05,0.01,">1 nonsynonymous","F70L A145V",2
"lib1","SARS-CoV-2","TACCAGGAATAAGCCT",4,14.86,7.84,-2.93,0.3,1.5,1.04,0.04,">1 nonsynonymous","N13I K48N T55V K87S T201Q",5
"lib1","SARS-CoV-2","TACCAGGAGAATTGAG",1,57.01,9.68,-1.09,0.09,2.73,1.04,0,">1 nonsynonymous","P7L A105S F156L",3
"lib1","SARS-CoV-2","TACCAGGATTAAAAGC",2,29.86,6.36,-4.41,0.34,1.5,1.05,0.01,">1 nonsynonymous","F17P D90H K128L I138G",4
"lib1","SARS-CoV-2","TACCAGGCAAGCGAGG",6,62.12,9.75,-1.01,0.1,2.05,1.11,0,">1 nonsynonymous","A105V G146S P191Y",3
"lib1","SARS-CoV-2","TACCAGGGCCTATGCT",1,37.83,6.65,-4.12,0.21,1.5,1.04,0.01,">1 nonsynonymous","F44L L57G L95P Y143Q",4
"lib1","SARS-CoV-2","TACCAGGGGAATCTCT",4,48.64,6,-4.76,0.76,1.5,1.14,0.01,">1 nonsynonymous","S41P P96D V103Q Y119R N151E G152C",6
"lib1","SARS-CoV-2","TACCAGGGGCCACCTG",6,100.72,8.5,-2.26,0.18,1.5,1.12,0.01,">1 nonsynonymous","G83R D137N",2
"lib1","SARS-CoV-2","TACCAGGTATGAATAA",5,17.89,6.95,-3.81,0.59,1.5,1.31,0.05,">1 nonsynonymous","C49S K198F",2
"lib1","SARS-CoV-2","TACCAGGTCCGGTATA",2,35.97,6.05,-4.71,1.78,1.5,1.21,0.07,">1 nonsynonymous","L38D F44E C61K G83T P96E A145N",6
"lib1","SARS-CoV-2","TACCAGGTTGTCTGTT",4,53.8,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","C61D S69W N107R R124V P149R P177N",6
"lib1","SARS-CoV-2","TACCAGTAAAAATAAA",1,54.79,9.68,-1.08,0.08,2.73,1.08,0,"1 nonsynonymous","D112E",1
"lib1","SARS-CoV-2","TACCAGTATATTTGGG",3,17.77,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L162P Q168S Y175W T201S",4
"lib1","SARS-CoV-2","TACCAGTGATTTATAG",2,20.94,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K56T D68A",2
"lib1","SARS-CoV-2","TACCAGTGTAACGCTA",3,12.96,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N40G T85L T148R F185S",4
"lib1","SARS-CoV-2","TACCAGTTAAACCCAC",3,2.56,NA,NA,NA,NA,NA,NA,"stop","A33T F44H K56I K94C G172R P197*",6
"lib1","SARS-CoV-2","TACCATAAAATAACAT",9,123.54,9.76,-1.01,0.13,2.04,1.12,0.01,">1 nonsynonymous","I2L A105V F160V",3
"lib1","SARS-CoV-2","TACCATAAACAGCGCG",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F Y91E K132T",3
"lib1","SARS-CoV-2","TACCATAAACCTTTAG",6,60.79,10.75,-0.02,0.06,2.93,1.04,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","TACCATAAATACCATA",1,24.45,10.33,-0.43,0.08,2.8,1.03,0,"1 nonsynonymous","N13F",1
"lib1","SARS-CoV-2","TACCATAAATGAAAAA",3,15.83,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","W106L R127L R136Q",3
"lib1","SARS-CoV-2","TACCATAACTGACGTC",1,58.22,10.35,-0.41,0.03,2.96,1.01,0,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","TACCATACACCACTAC",5,62.05,6.04,-4.72,1.26,1.5,1.24,0.03,"1 nonsynonymous","F70P",1
"lib1","SARS-CoV-2","TACCATACCATACAAT",3,41.31,8.16,-2.6,0.47,1.5,1,0.08,">1 nonsynonymous","T3L N40L Y50M",3
"lib1","SARS-CoV-2","TACCATACTAACAGAA",1,7.81,10.94,0.18,0.1,3,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TACCATAGAAGCAGTA",7,104.36,6.63,-4.13,0.43,1.5,1.29,0.02,">1 nonsynonymous","D34V N107D",2
"lib1","SARS-CoV-2","TACCATAGGAATTGAA",3,58.47,7.47,-3.29,0.36,1.5,1.16,0.04,">1 nonsynonymous","V65G D97A S113R L122Q S184I",5
"lib1","SARS-CoV-2","TACCATAGGGCAAGCA",1,16.22,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","I28S P82S K87N N151D A190E",5
"lib1","SARS-CoV-2","TACCATAGTCAGGAAA",8,67.78,8.89,-1.87,0.2,1.5,1.18,0.02,">1 nonsynonymous","R136L T148G V153P Q163Y",4
"lib1","SARS-CoV-2","TACCATATAACCTTTA",3,25.31,6,-4.76,2,3,1.14,0,">1 nonsynonymous","I2R L5P I72P Q176L",4
"lib1","SARS-CoV-2","TACCATATAATACCGT",5,70.41,9.85,-0.91,0.11,1.96,1.08,0,"1 nonsynonymous","F17Q",1
"lib1","SARS-CoV-2","TACCATATGACATGAG",1,8.74,6,-4.76,2,3,1.07,0,">1 nonsynonymous","A67I L95K T170C",3
"lib1","SARS-CoV-2","TACCATCAAAATGCAA",1,28.26,6.06,-4.7,1.19,1.5,1.27,0.02,">1 nonsynonymous","T46R C61M D68M K128N",4
"lib1","SARS-CoV-2","TACCATCAACTGATGA",1,31.48,10.34,-0.42,0.07,2.96,1,0,">1 nonsynonymous","Y175F P191F",2
"lib1","SARS-CoV-2","TACCATCATAGTAAGG",4,55.24,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9K V37H L95E F99I F134Q Y178M",6
"lib1","SARS-CoV-2","TACCATCCCCGCCATC",4,44.69,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N4A Y50S A145V G172Y",4
"lib1","SARS-CoV-2","TACCATCCCCTGGATC",2,11.11,9.76,-1.01,0.09,2.94,1,0,">1 nonsynonymous","L5C D98K F156K",3
"lib1","SARS-CoV-2","TACCATCGAGGTATTA",2,19.71,10.74,-0.03,0.07,2.97,1,0,"1 nonsynonymous","V37Q",1
"lib1","SARS-CoV-2","TACCATCTGTGAAAGG",1,0.06,NA,NA,NA,NA,NA,NA,"stop","K87N N130*",2
"lib1","SARS-CoV-2","TACCATCTTCAATCGT",4,44.37,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","N92V",1
"lib1","SARS-CoV-2","TACCATGCATACGCTA",10,152.53,10.75,-0.02,0.06,2.9,1.06,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","TACCATGCGGGTCTAT",3,73.88,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86L L162D L188F",3
"lib1","SARS-CoV-2","TACCATGGAATAGATA",1,12,6,-4.76,2,3,1.09,0,">1 nonsynonymous","C150R N157R V180I",3
"lib1","SARS-CoV-2","TACCATGGCATATACC",4,1.29,NA,NA,NA,NA,NA,NA,"stop","Q84Y F99G N107W K114* N118C",5
"lib1","SARS-CoV-2","TACCATGTCGGGGGAG",4,24.59,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G116D E141Y G146V Q168N S200F",5
"lib1","SARS-CoV-2","TACCATTCTCTTAAAG",2,60.41,10.28,-0.49,0.07,2.88,1.08,0,">1 nonsynonymous","T100H T140M S164E",3
"lib1","SARS-CoV-2","TACCATTGACCGTTAA",6,124.92,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L60R S108L R127P",3
"lib1","SARS-CoV-2","TACCATTGAGTGTATA",11,111.9,10.82,0.06,0.06,2.86,1.07,0,">1 nonsynonymous","I28M A42E K132S",3
"lib1","SARS-CoV-2","TACCATTTTCTGTGGA",2,14.68,9.66,-1.1,0.12,2.76,1.09,0.01,">1 nonsynonymous","D90N N118S E154V",3
"lib1","SARS-CoV-2","TACCATTTTGAAAGGT",1,11.63,6,-4.76,1.93,1.5,1.2,0.04,">1 nonsynonymous","N30Q P82N E186S",3
"lib1","SARS-CoV-2","TACCCAAAAAAACGAT",3,25.88,10.72,-0.04,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCCAAAAAAGCTAA",4,12.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8S V103S D112H Y121T",4
"lib1","SARS-CoV-2","TACCCAAAATCGCTTG",1,58.1,10.67,-0.09,0.06,2.97,1.04,0,">1 nonsynonymous","I2T V77L",2
"lib1","SARS-CoV-2","TACCCAAAATGTTTCC",3,25.29,10.09,-0.67,0.09,2.9,1,0,">1 nonsynonymous","V37N N118D N130S",3
"lib1","SARS-CoV-2","TACCCAAACCAGGCCG",4,28.89,10.31,-0.46,0.07,3,1,0,">1 nonsynonymous","T85R G174W",2
"lib1","SARS-CoV-2","TACCCAAACCCACGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F17E D90* N130*",3
"lib1","SARS-CoV-2","TACCCAAACCCTTCTT",1,56.45,6.07,-4.7,1.09,1.5,1.26,0.02,">1 nonsynonymous","K48L A89L",2
"lib1","SARS-CoV-2","TACCCAAACGACAGTA",8,124.07,10.15,-0.61,0.07,2.76,1.02,0,">1 nonsynonymous","D59C T100S",2
"lib1","SARS-CoV-2","TACCCAAACGACTGAT",1,33.48,10.74,-0.02,0.05,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCCAAAGAGCCGTA",6,42.03,8.07,-2.7,0.1,2.24,1.06,0,">1 nonsynonymous","C61K Y119V E141M S164I",4
"lib1","SARS-CoV-2","TACCCAAATACTATAA",5,59.27,9.83,-0.93,0.09,2.06,1.07,0,">1 nonsynonymous","T15Q S53F S164C",3
"lib1","SARS-CoV-2","TACCCAACAACTATAA",8,68.74,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","D68V Y123I",2
"lib1","SARS-CoV-2","TACCCAACTACGGCAG",7,110.94,8.62,-2.14,0.14,1.88,1.15,0.01,">1 nonsynonymous","E141F P177S",2
"lib1","SARS-CoV-2","TACCCAAGCCACATTG",1,40.68,6,-4.76,2,3,1.22,0,">1 nonsynonymous","R27L P96A R124H",3
"lib1","SARS-CoV-2","TACCCAATGATTTTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S43R G74* K198N",3
"lib1","SARS-CoV-2","TACCCAATTACTAATT",11,64.47,7.98,-2.78,0.21,1.73,1.16,0.01,">1 nonsynonymous","F47S K56T N130Y T170G",4
"lib1","SARS-CoV-2","TACCCAATTCATATGT",7,78.13,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2L C31M L38T C49I",4
"lib1","SARS-CoV-2","TACCCAATTTCAACAG",4,82.45,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10L F70R R136L",3
"lib1","SARS-CoV-2","TACCCACAAACTTTGT",3,6.15,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D97L S113L Q144L",3
"lib1","SARS-CoV-2","TACCCACACTAACCCG",5,1.3,NA,NA,NA,NA,NA,NA,"stop","P96* R136V F156I",3
"lib1","SARS-CoV-2","TACCCACATGATAGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","V77C G86*",2
"lib1","SARS-CoV-2","TACCCACCAAAACTTG",3,40.66,10.75,-0.02,0.07,2.92,1.03,0,">1 nonsynonymous","V37N C61S",2
"lib1","SARS-CoV-2","TACCCACCGCAGTGAA",3,19.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60R A81E Y143C V173L",4
"lib1","SARS-CoV-2","TACCCACCGGGCTCGA",2,11.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q G83C E135A",3
"lib1","SARS-CoV-2","TACCCACTCGAAAATT",9,2.99,NA,NA,NA,NA,NA,NA,"stop","A14D S19W D98* I104K N130V Q144A",6
"lib1","SARS-CoV-2","TACCCAGAAATGGTCT",5,0.72,NA,NA,NA,NA,NA,NA,"stop","G9L I28Q S36* D97K N107K E135T E154Y",7
"lib1","SARS-CoV-2","TACCCAGAATGAAGGA",20,2.28,NA,NA,NA,NA,NA,NA,"stop","G83R A89L D98N Y121*",4
"lib1","SARS-CoV-2","TACCCAGACCTACTAA",2,40.23,10.74,-0.02,0.12,2.88,1.05,0,"1 nonsynonymous","N1V",1
"lib1","SARS-CoV-2","TACCCAGATCGACTGT",3,68.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59S C150Y G174L",3
"lib1","SARS-CoV-2","TACCCAGCCAAATGGA",4,23.88,6,-4.76,1.69,1.5,1.13,0.01,">1 nonsynonymous","V20L C150E G174V",3
"lib1","SARS-CoV-2","TACCCAGTATTTAACG",3,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H F47H A81Y D98I",4
"lib1","SARS-CoV-2","TACCCAGTTTCATACT",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39H E76R Y93H T201S",4
"lib1","SARS-CoV-2","TACCCATCTAATTTGA",4,3.8,NA,NA,NA,NA,NA,NA,"stop","G86V G117*",2
"lib1","SARS-CoV-2","TACCCATCTGAGGTAC",6,2.22,NA,NA,NA,NA,NA,NA,"stop","F8M N92G Y165*",3
"lib1","SARS-CoV-2","TACCCATTAAGAATTC",7,127.19,7.96,-2.8,0.14,1.81,1.16,0.01,">1 nonsynonymous","D90S N157Y",2
"lib1","SARS-CoV-2","TACCCATTAGCCCGAA",2,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A89S G146P",3
"lib1","SARS-CoV-2","TACCCATTGCATGACC",1,62.66,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V52T N58H D97R G172N",4
"lib1","SARS-CoV-2","TACCCATTGTATTTAG",1,46.81,7.94,-2.82,0.26,1.75,1.15,0.02,">1 nonsynonymous","D98V Y143S",2
"lib1","SARS-CoV-2","TACCCCACAGCTTACA",4,42.2,10.6,-0.16,0.06,2.88,1.08,0,"1 nonsynonymous","T46S",1
"lib1","SARS-CoV-2","TACCCCAGACTACAAC",2,8.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6R A14H D34T",3
"lib1","SARS-CoV-2","TACCCCAGGCGAGATA",2,7.34,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37S F62G G101D I138F S184K",5
"lib1","SARS-CoV-2","TACCCCATACTACAAA",1,71.8,10.56,-0.2,0.06,2.96,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TACCCCATCGTACGGA",9,57.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C G116T",2
"lib1","SARS-CoV-2","TACCCCCACATTTGAC",3,32.88,9.48,-1.29,0.07,2.83,1.04,0,"1 nonsynonymous","G166H",1
"lib1","SARS-CoV-2","TACCCCCAGTTACACT",4,30.68,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S36V P82M D90V V103W L122Q T170V",6
"lib1","SARS-CoV-2","TACCCCCATCAACCCT",1,26.18,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","F12W G83V A89Q R136K P149K",5
"lib1","SARS-CoV-2","TACCCCCATTAAGAAA",3,41.33,10.74,-0.03,0.05,2.97,1,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","TACCCCCCACCCACCA",2,40.05,10.3,-0.46,0.05,2.88,1.04,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","TACCCCCGATAATTCA",3,46.88,6,-4.76,1.23,1.5,1.24,0.02,">1 nonsynonymous","W23R V37H Y66T D137P Q176S",5
"lib1","SARS-CoV-2","TACCCCCTAAGCCAAT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T A33V Y91S N130L A145L F185L",6
"lib1","SARS-CoV-2","TACCCCCTAATCACCT",3,33.69,6.23,-4.54,0.63,1.5,1.12,0.02,">1 nonsynonymous","L38Y K48N C61P D98S Y119I",5
"lib1","SARS-CoV-2","TACCCCCTATGAGGTG",8,153.91,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P7T Y39R G86V W106S",4
"lib1","SARS-CoV-2","TACCCCCTCGTCTATG",5,3.95,NA,NA,NA,NA,NA,NA,"stop","N58* K94A V103L R124P I138E C150E",6
"lib1","SARS-CoV-2","TACCCCCTGTAATACA",2,50.39,10.16,-0.61,0.09,2.69,1,0,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","TACCCCCTTCTAGAAG",1,6.47,6.77,-3.99,0.27,1.6,1.01,0.01,">1 nonsynonymous","C61V R73M F99L P133E",4
"lib1","SARS-CoV-2","TACCCCGAACAACTAT",9,92.42,10.77,0.01,0.06,2.97,1.04,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","TACCCCGACAAACGTG",1,7.76,6,-4.76,2,3,1.19,0,">1 nonsynonymous","R25P A105V N118I R127A",4
"lib1","SARS-CoV-2","TACCCCGGGCTAATCA",1,22.22,10.31,-0.45,0.08,2.78,1.15,0,">1 nonsynonymous","L5Y N64C T85G K114E",4
"lib1","SARS-CoV-2","TACCCCTAATCTGCAC",1,6.51,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","F47M F99S G152Y",3
"lib1","SARS-CoV-2","TACCCCTACTAAATAG",6,90.55,9.15,-1.61,0.11,2.37,1.13,0,">1 nonsynonymous","Y35L S45M G74M",3
"lib1","SARS-CoV-2","TACCCCTACTCTACAT",1,42.87,9.79,-0.98,0.11,2.57,1.01,0.01,">1 nonsynonymous","N107S T148G T201S",3
"lib1","SARS-CoV-2","TACCCCTCGCGAACTA",3,36.25,8.31,-2.46,0.24,1.5,1.08,0.02,">1 nonsynonymous","L5F T46C V71M",3
"lib1","SARS-CoV-2","TACCCCTCTCGATTAC",5,25.69,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","I2T N64S F70I I88Y T140A",5
"lib1","SARS-CoV-2","TACCCCTGACTGCTTA",2,92.55,10.71,-0.06,0.04,2.88,1.03,0,">1 nonsynonymous","R27M P54K L60N",3
"lib1","SARS-CoV-2","TACCCCTTAAATATTA",2,0.26,NA,NA,NA,NA,NA,NA,"stop","S69* K198S",2
"lib1","SARS-CoV-2","TACCCGAGATGTTAGC",3,62.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7I V20E N171I Y175W",4
"lib1","SARS-CoV-2","TACCCGATAAAAGCAA",1,24.55,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49V A105F I142L S200A",4
"lib1","SARS-CoV-2","TACCCGATACGAAACT",3,67.13,8.23,-2.54,0.19,2.28,1.11,0.01,">1 nonsynonymous","S113I H189Y",2
"lib1","SARS-CoV-2","TACCCGATAGATAAGT",2,79.97,NA,NA,NA,NA,NA,NA,"stop","N40* A105S G152W",3
"lib1","SARS-CoV-2","TACCCGCGATCAAACA",1,19.25,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","F17S C31H F44K D112L Q176W",5
"lib1","SARS-CoV-2","TACCCGGATAACATTT",2,5.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F K56S",2
"lib1","SARS-CoV-2","TACCCGTACAAAAGTA",1,1.92,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TACCCGTAGACCTTTC",8,116.03,9.39,-1.37,0.13,2.23,1.14,0.01,">1 nonsynonymous","Y50F L57A F156A K198L",4
"lib1","SARS-CoV-2","TACCCGTGACTTGACG",10,1.63,NA,NA,NA,NA,NA,NA,"stop","Y119* G152S",2
"lib1","SARS-CoV-2","TACCCGTTTCTCGAAA",5,69.14,10.6,-0.17,0.05,2.94,1.02,0,">1 nonsynonymous","A33P N64Y",2
"lib1","SARS-CoV-2","TACCCTAAAAATATAC",4,72.67,9.36,-1.41,0.07,2.81,1.11,0,">1 nonsynonymous","I2D I142R",2
"lib1","SARS-CoV-2","TACCCTAACGTAACCC",4,83.13,8.6,-2.17,0.14,2.06,1.11,0.01,">1 nonsynonymous","N40T Y119K F134C Q168T",4
"lib1","SARS-CoV-2","TACCCTAATATTAAAT",7,0.8,NA,NA,NA,NA,NA,NA,"stop","A105T Y123M D137* S147P",4
"lib1","SARS-CoV-2","TACCCTAATGAGTATC",3,20.48,6,-4.76,2,3,1.11,0,">1 nonsynonymous","D68L A89Y T170L T201G",4
"lib1","SARS-CoV-2","TACCCTAATTATATGG",1,7.06,NA,NA,NA,NA,NA,NA,"stop","N107K K114R T140*",3
"lib1","SARS-CoV-2","TACCCTACACCTCAAA",1,8.22,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6I Y35V C49N",3
"lib1","SARS-CoV-2","TACCCTAGCCTCTTCG",3,31,9.99,-0.78,0.13,2.61,1.04,0,">1 nonsynonymous","N58V Q144T",2
"lib1","SARS-CoV-2","TACCCTAGGCTATCTA",14,233.78,9.7,-1.06,0.04,2.86,1.05,0,"1 nonsynonymous","T170P",1
"lib1","SARS-CoV-2","TACCCTATGCGAGGGG",3,13.28,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","N1E D34G Q84N F99L C102A",5
"lib1","SARS-CoV-2","TACCCTATTAGGTGGC",4,18.13,8.07,-2.7,0.35,1.5,1.1,0.05,">1 nonsynonymous","F12S F44R T201C",3
"lib1","SARS-CoV-2","TACCCTCAACCAACTA",3,45.47,10.78,0.02,0.09,2.92,1,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TACCCTCCCAGTCCTA",3,14.31,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","F8S T63I D75L T140K",4
"lib1","SARS-CoV-2","TACCCTCCGCTGATCA",10,59.6,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V65E Q84L T100S S129Y I142C",5
"lib1","SARS-CoV-2","TACCCTCTTCGCTAAT",1,19.46,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","W23R S41T Y121R F160H G166E K198S",6
"lib1","SARS-CoV-2","TACCCTGAATAACTCT",5,56.28,10.81,0.05,0.07,2.94,1.03,0,">1 nonsynonymous","L5D K199V",2
"lib1","SARS-CoV-2","TACCCTGACATTGGAC",1,9.87,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G9M G117L F134S P149T T201M",5
"lib1","SARS-CoV-2","TACCCTGACTAGATAA",4,15.24,6,-4.76,0.85,1.5,1.1,0.01,">1 nonsynonymous","G9M Q84W V115G R136Y V181L",5
"lib1","SARS-CoV-2","TACCCTGATCCAGAAA",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M G166L P197E",3
"lib1","SARS-CoV-2","TACCCTGGCTCTTATA",2,40.47,10.51,-0.26,0.05,2.98,1.01,0,">1 nonsynonymous","A89T N120Q",2
"lib1","SARS-CoV-2","TACCCTTAACCAGTTT",2,12.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102K",1
"lib1","SARS-CoV-2","TACCCTTAGGCGCGGT",2,1.32,NA,NA,NA,NA,NA,NA,"stop","L5R N24G E76* K94Y T100Q D112N T201A",7
"lib1","SARS-CoV-2","TACCCTTATACGGTGA",5,9.24,10.72,-0.05,0.18,2.9,1.03,0.01,"1 nonsynonymous","P197L",1
"lib1","SARS-CoV-2","TACCCTTATCAAAAAC",3,24.61,6.11,-4.66,0.34,3,1.1,0,">1 nonsynonymous","K94E D98F E141W",3
"lib1","SARS-CoV-2","TACCCTTCAGTATCAA",1,26.73,6.25,-4.52,0.66,1.5,1.18,0.02,">1 nonsynonymous","L5T D59A D112S K128D E141K",5
"lib1","SARS-CoV-2","TACCCTTCGGTTTAAC",6,248.68,9.68,-1.08,0.09,1.8,1.08,0,">1 nonsynonymous","G83F D90F D97G",3
"lib1","SARS-CoV-2","TACCCTTGGACAACAA",10,155.36,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F12P P96I V153G Q176R",4
"lib1","SARS-CoV-2","TACCCTTGTTTCGATT",2,12.85,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C102Y Y121M P161A V182A",4
"lib1","SARS-CoV-2","TACCCTTTCGTACTTT",3,85.13,10.8,0.04,0.07,2.94,1.04,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","TACCGAAACCGGTCAC",3,36.97,10.63,-0.13,0.11,2.77,1.09,0,">1 nonsynonymous","A14S D59H K198D",3
"lib1","SARS-CoV-2","TACCGAAAGATCAAAT",7,41.38,7.74,-3.03,0.27,1.5,1.09,0.02,">1 nonsynonymous","K94F E154Y",2
"lib1","SARS-CoV-2","TACCGAAATGTGTCCC",2,24.92,10.47,-0.3,0.03,2.91,1.03,0,"1 nonsynonymous","R16P",1
"lib1","SARS-CoV-2","TACCGAAATTATGACT",9,47.9,8.94,-1.82,0.23,1.59,1.18,0.02,">1 nonsynonymous","C49S K56Q",2
"lib1","SARS-CoV-2","TACCGAACAGGATTTT",3,36.43,10.19,-0.57,0.11,2.81,1,0.01,"1 nonsynonymous","Y35R",1
"lib1","SARS-CoV-2","TACCGAACTAACCTTA",11,0.77,NA,NA,NA,NA,NA,NA,"stop","I2* T63V D90G",3
"lib1","SARS-CoV-2","TACCGAATAGGAAATA",7,72.04,8.56,-2.2,0.15,2.28,1.11,0.01,">1 nonsynonymous","C102I Y143I",2
"lib1","SARS-CoV-2","TACCGAATGAGAGCAA",3,39.98,8.52,-2.24,0.22,1.78,1.13,0.03,">1 nonsynonymous","T3Y K48L N118I",3
"lib1","SARS-CoV-2","TACCGAATTGATCGAC",2,19.99,6.84,-3.93,0.37,1.5,1.08,0.03,">1 nonsynonymous","Y21T G155C",2
"lib1","SARS-CoV-2","TACCGACAACTTCTTG",5,4.71,NA,NA,NA,NA,NA,NA,"stop","L57* E141L",2
"lib1","SARS-CoV-2","TACCGACGAGACATCG",6,10.72,6.83,-3.94,0.63,1.5,1.18,0.07,">1 nonsynonymous","S41N C102K",2
"lib1","SARS-CoV-2","TACCGACGCATAAAAT",1,53.3,9.31,-1.46,0.09,2.71,1.11,0,">1 nonsynonymous","C6D Y119R",2
"lib1","SARS-CoV-2","TACCGACGGGTCATCA",5,115.66,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","N13R T63L G172S",3
"lib1","SARS-CoV-2","TACCGACTTCAAATAA",5,42.02,10.6,-0.17,0.05,2.92,1.03,0,"1 nonsynonymous","A33I",1
"lib1","SARS-CoV-2","TACCGAGAACGACAAA",8,78.43,10.34,-0.42,0.05,2.9,1.06,0,"1 nonsynonymous","G155E",1
"lib1","SARS-CoV-2","TACCGAGAATCTGTAA",1,14.56,8.69,-2.07,0.12,2.1,1.17,0.01,">1 nonsynonymous","E10K R73L",2
"lib1","SARS-CoV-2","TACCGAGGACTGTAAC",3,0.51,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib1","SARS-CoV-2","TACCGAGGATAGTCCC",2,12.99,8.01,-2.76,0.29,2.33,1.16,0.02,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","TACCGAGTACATGAGA",8,46.44,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3K L38R T63Q V77E",4
"lib1","SARS-CoV-2","TACCGAGTCCTCGACG",1,29.32,10.75,-0.02,0.06,2.85,1.08,0,">1 nonsynonymous","A22R L122E",2
"lib1","SARS-CoV-2","TACCGATAACACATAC",4,26.88,9.5,-1.26,0.21,1.83,1.14,0.02,">1 nonsynonymous","C102A L122H",2
"lib1","SARS-CoV-2","TACCGATAACGCTGAA",4,0.56,NA,NA,NA,NA,NA,NA,"stop","S29G Y50L D90*",3
"lib1","SARS-CoV-2","TACCGATCGCCCAGAA",1,0.62,NA,NA,NA,NA,NA,NA,"stop","K56L T148C F160Q P177*",4
"lib1","SARS-CoV-2","TACCGATGACCAATAT",1,8.23,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y93H L125M",2
"lib1","SARS-CoV-2","TACCGATTAAATCGCA",3,155.75,9.86,-0.91,0.1,2.32,1.05,0,">1 nonsynonymous","L57E N120V",2
"lib1","SARS-CoV-2","TACCGATTAAGGGATA",4,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59Y R127T",2
"lib1","SARS-CoV-2","TACCGCAATCCAGGGT",5,0.47,NA,NA,NA,NA,NA,NA,"stop","R16* A42R S69V G152V F185H",5
"lib1","SARS-CoV-2","TACCGCACTTAGTTAG",1,15.24,6,-4.76,0.59,2.36,1.05,0,">1 nonsynonymous","N1D P7G I80E W106E Q176V",5
"lib1","SARS-CoV-2","TACCGCAGATCAAAGT",1,5.55,9.07,-1.69,0.21,2.8,1.04,0.02,">1 nonsynonymous","Y119V P149H",2
"lib1","SARS-CoV-2","TACCGCATGAGTACAC",11,166.1,10.76,-0.01,0.08,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACCGCATTCGTAATA",6,164.65,8.3,-2.46,0.13,2.55,1.1,0.01,"1 nonsynonymous","Y175R",1
"lib1","SARS-CoV-2","TACCGCCAAATTTAAA",2,31.37,10.69,-0.07,0.07,2.84,1.02,0,"1 nonsynonymous","K94A",1
"lib1","SARS-CoV-2","TACCGCCACGCCGGGA",7,171.64,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","I28F Y50K S113P R124G T201G",5
"lib1","SARS-CoV-2","TACCGCCCAGCGAAAT",8,26.41,6.18,-4.58,0.71,1.5,1.2,0.02,">1 nonsynonymous","V11C V103Q Y175H",3
"lib1","SARS-CoV-2","TACCGCCCAGCTAGCG",6,86.67,9.89,-0.88,0.14,2.34,1.05,0.01,">1 nonsynonymous","Y91V L111K",2
"lib1","SARS-CoV-2","TACCGCCCGTAATTAT",2,38.27,9.18,-1.59,0.09,2.74,1.11,0.01,">1 nonsynonymous","S41R Q144R Y159H S184V",4
"lib1","SARS-CoV-2","TACCGCCGGATGTAAT",1,17.78,10.9,0.13,0.06,2.86,1.06,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","TACCGCCTTACTCCTT",11,142.09,10.74,-0.03,0.04,2.96,1.01,0,">1 nonsynonymous","F17W K56I",2
"lib1","SARS-CoV-2","TACCGCTAAGTCAATC",4,31.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S N107H D137H G152H",4
"lib1","SARS-CoV-2","TACCGCTAATAATGTG",5,37.2,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C150S P177D",2
"lib1","SARS-CoV-2","TACCGGAACGGGTACA",1,1.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15Q",1
"lib1","SARS-CoV-2","TACCGGAATATTAATT",3,29.36,10.69,-0.07,0.29,2.62,1.05,0.03,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","TACCGGAATGTTGCGT",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50H G86A Y123T Y175T",4
"lib1","SARS-CoV-2","TACCGGACACTGCGGC",5,33.96,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","F12I G101R I104N",3
"lib1","SARS-CoV-2","TACCGGACGGCATTGG",2,138,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K94R N118D T148S G172W",4
"lib1","SARS-CoV-2","TACCGGATAAACGATT",11,5.85,9.32,-1.44,0.27,2.51,1.29,0.05,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","TACCGGATACATGTAT",1,9.13,9.37,-1.39,0.08,2.95,1.01,0,">1 nonsynonymous","V37N P54E Y119P",3
"lib1","SARS-CoV-2","TACCGGATTAGTAATT",1,64.38,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","N4S N24L D34E A42S P82S",5
"lib1","SARS-CoV-2","TACCGGATTTCTCGAG",4,148.37,10.33,-0.44,0.04,2.84,1.02,0,"1 nonsynonymous","C49W",1
"lib1","SARS-CoV-2","TACCGGCAATAAATCT",9,198.58,7.29,-3.48,0.12,1.5,1.13,0,">1 nonsynonymous","A81S Y143R",2
"lib1","SARS-CoV-2","TACCGGCATGAAGCGC",10,0.77,NA,NA,NA,NA,NA,NA,"stop","N4H E10Y T46V D59S D90R N118D R127S S184*",8
"lib1","SARS-CoV-2","TACCGGGACCCTCTAA",1,33.91,6.07,-4.7,0.89,1.5,1.15,0.02,">1 nonsynonymous","V32D F44N C49F D90K",4
"lib1","SARS-CoV-2","TACCGGGGACATTAAC",9,120.36,8.33,-2.44,0.15,2.27,1.12,0.01,">1 nonsynonymous","S41L T85R Y143C",3
"lib1","SARS-CoV-2","TACCGGGGACTATCAA",1,19.35,6.16,-4.6,1.26,1.5,1.28,0.04,">1 nonsynonymous","C6D C61Q E76G G83D R127K G146M",6
"lib1","SARS-CoV-2","TACCGGGGGTAACGCA",1,26.1,10.55,-0.21,0.08,2.99,1,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","TACCGGTCTATCGTTT",4,6.39,9.25,-1.52,0.31,1.5,1.05,0.05,">1 nonsynonymous","E10D Y123L V181F",3
"lib1","SARS-CoV-2","TACCGGTGAATATATT",2,56.56,8.62,-2.15,0.1,2.71,1.05,0.01,">1 nonsynonymous","G9W A18Q K128S Q168L",4
"lib1","SARS-CoV-2","TACCGGTTATACAACA",1,15.62,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","T85C G101L",2
"lib1","SARS-CoV-2","TACCGGTTGATCTTAA",2,12.71,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","Y50K D98N L183P",3
"lib1","SARS-CoV-2","TACCGTACAAATCCTA",4,62.4,10.62,-0.14,0.06,2.95,1,0,">1 nonsynonymous","T3V S139N",2
"lib1","SARS-CoV-2","TACCGTACTGCACGTT",10,18.01,7,-3.76,0.49,1.5,1.04,0.06,">1 nonsynonymous","I2F D34S D137L T140I Y159S",5
"lib1","SARS-CoV-2","TACCGTAGATGACTTG",3,1.91,NA,NA,NA,NA,NA,NA,"stop","C6* A42R",2
"lib1","SARS-CoV-2","TACCGTATATACTCAT",2,18.05,9.98,-0.78,0.09,2.69,1.02,0.01,">1 nonsynonymous","K48L Y121S P197T",3
"lib1","SARS-CoV-2","TACCGTATATCAAACG",6,87.6,10.74,-0.02,0.06,2.9,1.03,0,">1 nonsynonymous","P54S K132Q",2
"lib1","SARS-CoV-2","TACCGTCAAACCATAC",1,8,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S45D L57T E141L G155C",4
"lib1","SARS-CoV-2","TACCGTCCTAAACCTG",1,24.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V77P L122K F134G G155L Q168T G174W T201N",7
"lib1","SARS-CoV-2","TACCGTCTACAATACA",5,105.98,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y39Q A89E R179F",3
"lib1","SARS-CoV-2","TACCGTCTGTATGGGT",2,52.87,6.86,-3.9,0.2,1.78,1.14,0.01,">1 nonsynonymous","C158R G174D",2
"lib1","SARS-CoV-2","TACCGTCTTATACACA",4,21.48,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N64L V77F S108M L131T Q168H",5
"lib1","SARS-CoV-2","TACCGTGAATAAACCT",2,22.45,10.54,-0.23,0.08,2.75,1.07,0,">1 nonsynonymous","T148A F160S",2
"lib1","SARS-CoV-2","TACCGTTAAGTAAAAT",9,219.14,10.5,-0.27,0.04,2.89,1.03,0,">1 nonsynonymous","L60Y V77M T100V P149L",4
"lib1","SARS-CoV-2","TACCGTTAATGAGCTA",13,98.43,10.66,-0.1,0.06,2.86,1.02,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","TACCGTTACTTTACAC",2,17.05,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","E76D I88S E135Y",3
"lib1","SARS-CoV-2","TACCGTTAGTTCATCC",3,80.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10A A18R D98S R136C Y143S",5
"lib1","SARS-CoV-2","TACCGTTCTTTACGGG",3,31.84,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N24C C49L T201I",3
"lib1","SARS-CoV-2","TACCTAAAAAATACTC",4,64,10.56,-0.2,0.04,2.89,1.06,0,"1 nonsynonymous","F47M",1
"lib1","SARS-CoV-2","TACCTAAAAAGGGAAA",4,65.83,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A81I G86F Y123L",3
"lib1","SARS-CoV-2","TACCTAAACTTCTAGA",4,29.35,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N4S K48L A105D Y121N E141T Y175I",6
"lib1","SARS-CoV-2","TACCTAAATGTTAATA",4,48.25,10.42,-0.34,0.05,2.91,1,0,"1 nonsynonymous","K87N",1
"lib1","SARS-CoV-2","TACCTAACATACGACT",14,154.47,10.8,0.04,0.05,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TACCTAACCAATGGAT",13,3.48,NA,NA,NA,NA,NA,NA,"stop","N1* K199N",2
"lib1","SARS-CoV-2","TACCTAACTAGTCTAT",1,34.75,9.2,-1.57,0.16,1.68,1.16,0.01,">1 nonsynonymous","S69K I138M E154T",3
"lib1","SARS-CoV-2","TACCTAACTAGTGGTA",3,6.88,7.32,-3.44,0.37,1.5,1.08,0.03,">1 nonsynonymous","A14E E76N G86V N130H",4
"lib1","SARS-CoV-2","TACCTAAGAAGAAAAA",1,14.51,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","I104Q G155T",2
"lib1","SARS-CoV-2","TACCTAATAAATTCTT",4,18.22,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","D34A F47L Y50S K87H L95S",5
"lib1","SARS-CoV-2","TACCTACACATATAAC",4,40.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y39I L60R V77T E135P F167E",5
"lib1","SARS-CoV-2","TACCTACACGCTTTTA",4,22.62,10.76,-0.01,0.07,2.97,1.01,0,">1 nonsynonymous","N40F F134Y",2
"lib1","SARS-CoV-2","TACCTACAGAATATAA",3,23.14,10.72,-0.04,0.06,2.9,1.02,0,">1 nonsynonymous","N4R L187P",2
"lib1","SARS-CoV-2","TACCTACAGCATAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A14W Y39* S108V",3
"lib1","SARS-CoV-2","TACCTACCCCTCAGCA",7,12.23,8.62,-2.15,0.37,1.57,1.28,0.06,">1 nonsynonymous","C49R G74H W106Q",3
"lib1","SARS-CoV-2","TACCTACCCTTCTTTC",3,30.95,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F99C W106K",2
"lib1","SARS-CoV-2","TACCTACCTCTGGACA",2,71.16,8.37,-2.4,0.13,2.3,1.13,0.01,">1 nonsynonymous","N118C F134L F156L",3
"lib1","SARS-CoV-2","TACCTACGACGGTACG",4,22.98,10.79,0.02,0.04,2.97,1,0,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","TACCTACGCCATAAAT",1,2.42,NA,NA,NA,NA,NA,NA,"stop","Y21G G116V G155*",3
"lib1","SARS-CoV-2","TACCTACGGCTCTGGC",3,34.55,10.85,0.08,0.12,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTACTAACTACTG",4,16.82,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S41T Y119W N157V",3
"lib1","SARS-CoV-2","TACCTACTCTTAGACC",1,62.83,10.24,-0.52,0.12,2.54,1.04,0,">1 nonsynonymous","V71L N130Y",2
"lib1","SARS-CoV-2","TACCTACTCTTCACTC",4,161.53,10.75,-0.01,0.04,2.88,1.08,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","TACCTACTTATGACAA",5,60.98,10.21,-0.56,0.08,2.78,1.03,0,">1 nonsynonymous","N4S S69M",2
"lib1","SARS-CoV-2","TACCTACTTCCTCGTA",7,19.27,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5C F12S S36K G101Y N120Y V182M",6
"lib1","SARS-CoV-2","TACCTAGAAAACGTTG",1,0.69,NA,NA,NA,NA,NA,NA,"stop","T15R K114* E154C",3
"lib1","SARS-CoV-2","TACCTAGTGCTAGTAA",1,27.76,9.81,-0.96,0.2,1.82,1.12,0.01,"1 nonsynonymous","D137A",1
"lib1","SARS-CoV-2","TACCTATAACTGTAAC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib1","SARS-CoV-2","TACCTATAAGTCCCAT",6,59.7,10.84,0.08,0.08,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTATCGGTGCTAT",5,1.81,NA,NA,NA,NA,NA,NA,"stop","F44D A81* T201S",3
"lib1","SARS-CoV-2","TACCTATGAACCATTT",6,16.53,6,-4.76,1.74,1.5,1.2,0.03,">1 nonsynonymous","F12N L60T V103M",3
"lib1","SARS-CoV-2","TACCTATGAATATCAC",1,11.9,11.04,0.28,0.09,2.92,1.02,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","TACCTATGACAAAGGG",1,35.34,10.54,-0.23,0.05,2.9,1.02,0,">1 nonsynonymous","N4H S36H S147F",3
"lib1","SARS-CoV-2","TACCTATGGGCTAATC",5,102.6,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V20M V52L L60P T63I K128R G155T Y165R S200L",8
"lib1","SARS-CoV-2","TACCTATGTCTATTAT",2,6.75,9.99,-0.78,0.2,2.89,1,0.02,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","TACCTATTGAGACACA",3,60.9,10.45,-0.32,0.08,2.95,1.03,0,">1 nonsynonymous","S43P V103I T201I",3
"lib1","SARS-CoV-2","TACCTATTTGAGGTGT",7,175.72,10.79,0.02,0.08,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTATTTGAGTCTC",5,33.94,6,-4.76,1.11,1.5,1.12,0.01,">1 nonsynonymous","Y35R S113H",2
"lib1","SARS-CoV-2","TACCTCAAAGACATAA",2,24.58,10.67,-0.09,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTCAAAGCCAACG",1,33.79,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K56S C61N Y119F P133M Y143S",5
"lib1","SARS-CoV-2","TACCTCAATTCGAGAG",1,24.64,10.76,-0.01,0.09,2.79,1.16,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TACCTCAGAACAAGCA",5,15.53,6.86,-3.9,0.47,1.5,1.01,0.06,">1 nonsynonymous","S19T G83L N107R",3
"lib1","SARS-CoV-2","TACCTCAGAATGACAA",6,2.76,NA,NA,NA,NA,NA,NA,"stop","T3* N64Y F99H S200I",4
"lib1","SARS-CoV-2","TACCTCATATATCACT",14,164.59,9.91,-0.85,0.09,2.12,1.06,0,">1 nonsynonymous","K26G K56R",2
"lib1","SARS-CoV-2","TACCTCCAATACAATA",10,135.19,10.76,0,0.08,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTCCAATATAGTA",2,31.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C61L W106N P161R",3
"lib1","SARS-CoV-2","TACCTCCACGTATCCA",2,29.53,10.39,-0.37,0.09,2.92,1.01,0,">1 nonsynonymous","C61R I142L Q163C",3
"lib1","SARS-CoV-2","TACCTCCATTAGCTGT",6,89.31,9.76,-1.01,0.1,1.94,1.07,0,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","TACCTCCATTGCTCGA",3,63,10.09,-0.67,0.07,2.65,1.04,0,">1 nonsynonymous","A14T N110P",2
"lib1","SARS-CoV-2","TACCTCCCCCTTTGTA",6,1.41,NA,NA,NA,NA,NA,NA,"stop","S19* Y35W C61T F134A G146E",5
"lib1","SARS-CoV-2","TACCTCCCTTATCATA",2,5.09,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","T15G W23L A89N V180E",4
"lib1","SARS-CoV-2","TACCTCGAGCCCTAAG",6,46.43,6.17,-4.59,0.53,1.5,1.12,0.02,">1 nonsynonymous","A42S I72L C150F",3
"lib1","SARS-CoV-2","TACCTCGCCCATCTGA",2,61.39,6.14,-4.62,0.52,1.5,1.14,0.01,">1 nonsynonymous","Y21N G83D Y121M",3
"lib1","SARS-CoV-2","TACCTCGCTTTTCAAG",8,6.27,NA,NA,NA,NA,NA,NA,"stop","N1L N24K S41L Y91* V180M K198W",6
"lib1","SARS-CoV-2","TACCTCTGAATGACCA",2,73.87,9.93,-0.83,0.08,2.55,1,0,">1 nonsynonymous","N58Y F134L",2
"lib1","SARS-CoV-2","TACCTGAACAATGTCT",4,46.39,10.67,-0.1,0.08,2.76,1.12,0,"1 nonsynonymous","A42C",1
"lib1","SARS-CoV-2","TACCTGAACCCCACTG",6,166.85,6.03,-4.74,0.67,1.5,1.2,0.01,">1 nonsynonymous","L95I S113T G146R",3
"lib1","SARS-CoV-2","TACCTGACAAATTCAC",3,25.03,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T85N C158I",2
"lib1","SARS-CoV-2","TACCTGACCAGTTGAC",1,14,7.47,-3.29,0.59,1.75,1,0.08,">1 nonsynonymous","L57S W106D L125V P149D L183A",5
"lib1","SARS-CoV-2","TACCTGACCTATACTC",5,54.45,6.82,-3.94,0.43,1.5,1.23,0.03,">1 nonsynonymous","W106F R127K E135W",3
"lib1","SARS-CoV-2","TACCTGACTTAAAAGA",7,210.53,10.74,-0.02,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTGACTTTGAGAC",6,73.26,10.76,-0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTGAGAAAGTCAG",1,9.87,6.97,-3.79,0.34,1.5,1,0.04,">1 nonsynonymous","V71Q E141P S200N",3
"lib1","SARS-CoV-2","TACCTGATAAACAACC",3,10.18,10.2,-0.57,0.08,2.96,1,0,">1 nonsynonymous","K114C T140P",2
"lib1","SARS-CoV-2","TACCTGATTTCACACG",7,108.33,9.01,-1.75,0.09,2.59,1.12,0,">1 nonsynonymous","Q84K K87S N107P",3
"lib1","SARS-CoV-2","TACCTGCAACCATAAT",3,0.53,NA,NA,NA,NA,NA,NA,"stop","S19Y C49M K56* Y119W Q176R",5
"lib1","SARS-CoV-2","TACCTGCATCTTTATT",8,40.25,8.32,-2.45,0.36,1.5,1,0.05,">1 nonsynonymous","T3V N40A G86S",3
"lib1","SARS-CoV-2","TACCTGCCCTCATCAT",1,19.68,10.17,-0.6,0.1,2.81,1,0,">1 nonsynonymous","P7Y Y35P",2
"lib1","SARS-CoV-2","TACCTGCCGAAAAACA",5,3.6,NA,NA,NA,NA,NA,NA,"stop","N120D P149*",2
"lib1","SARS-CoV-2","TACCTGCGATGTTGAG",3,33.6,9.58,-1.18,0.16,1.93,1.1,0.01,">1 nonsynonymous","N1D T63R N107G I142L",4
"lib1","SARS-CoV-2","TACCTGGACTGACCAG",1,38.45,10.66,-0.1,0.07,2.98,1,0,">1 nonsynonymous","G9S P54K F126L",3
"lib1","SARS-CoV-2","TACCTGGATACAATGC",2,8.37,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","T3L F62N L95V Y121L P161V",5
"lib1","SARS-CoV-2","TACCTGGCCGTAGAGT",13,137.99,10.24,-0.52,0.04,2.89,1.01,0,">1 nonsynonymous","T3L G174Y L187N",3
"lib1","SARS-CoV-2","TACCTGTAATGGATGC",11,76.21,6,-4.76,1.86,1.5,1.28,0.02,">1 nonsynonymous","C49P I88F N120E",3
"lib1","SARS-CoV-2","TACCTGTATTTAAGAT",2,18.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C158Y P191S",2
"lib1","SARS-CoV-2","TACCTGTGAGAACGAA",2,28.28,10.15,-0.61,0.06,2.76,1,0,">1 nonsynonymous","F99Y S129A",2
"lib1","SARS-CoV-2","TACCTGTGGGGTATGA",8,27.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49R C61L S129Y",3
"lib1","SARS-CoV-2","TACCTGTTAAAATTTG",3,92.31,10.16,-0.6,0.07,2.72,1,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","TACCTGTTATTCTATT",4,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W C31F V153F C158S V173F",5
"lib1","SARS-CoV-2","TACCTTAAAAATATAA",4,30.28,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","R124S P133Y",2
"lib1","SARS-CoV-2","TACCTTAAACCGACAC",5,143.52,8.71,-2.05,0.14,2.11,1.14,0.01,">1 nonsynonymous","D34A Y119H T140V S147W P197I",5
"lib1","SARS-CoV-2","TACCTTAAACTCTGGC",5,49.26,10.44,-0.32,0.1,2.95,1,0,"1 nonsynonymous","F12L",1
"lib1","SARS-CoV-2","TACCTTAATTAGCAAG",6,378.2,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","R25T L122W Y143C",3
"lib1","SARS-CoV-2","TACCTTACAGATAAGC",6,0.05,NA,NA,NA,NA,NA,NA,"stop","N151* S200F",2
"lib1","SARS-CoV-2","TACCTTAGAGCCAACG",8,136.37,8.85,-1.92,0.07,2.81,1.12,0,">1 nonsynonymous","K56G F167W",2
"lib1","SARS-CoV-2","TACCTTAGCGACATCT",2,7.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R C61R T100S F167R G174L V180F",6
"lib1","SARS-CoV-2","TACCTTAGTAACAAAA",1,19.94,9.71,-1.06,0.15,2.34,1.02,0.01,">1 nonsynonymous","Y121S K128Y",2
"lib1","SARS-CoV-2","TACCTTATAAGTCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T55C G86V C195*",3
"lib1","SARS-CoV-2","TACCTTATAATCATAG",5,61.03,9.99,-0.77,0.09,1.91,1.08,0,">1 nonsynonymous","V32M W106S",2
"lib1","SARS-CoV-2","TACCTTATACAAATAC",5,133.52,10.66,-0.1,0.06,2.82,1.13,0,">1 nonsynonymous","G9W T201A",2
"lib1","SARS-CoV-2","TACCTTATCTACTATC",12,73.1,9.25,-1.51,0.21,1.59,1.17,0.02,">1 nonsynonymous","D68H A81Q F160A",3
"lib1","SARS-CoV-2","TACCTTATCTAGCGGT",2,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K C61R T85S A105N N120R",5
"lib1","SARS-CoV-2","TACCTTATTCTTCCAT",1,8.5,6,-4.76,2,1.5,1.13,0.07,">1 nonsynonymous","S69V F99R",2
"lib1","SARS-CoV-2","TACCTTCATAATCATG",3,47.78,10.77,0.01,0.05,2.94,1.02,0,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","TACCTTCCTTCAGACC",3,44.61,10.84,0.08,0.07,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TACCTTCTCTTCAACG",6,19.76,6,-4.76,2,3,1.13,0,">1 nonsynonymous","E10K W23K A33N N130T F156I",5
"lib1","SARS-CoV-2","TACCTTCTGAGCAAAT",2,25.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M R127C",2
"lib1","SARS-CoV-2","TACCTTGAAACTTCCG",8,129.17,10.07,-0.69,0.05,2.9,1,0,">1 nonsynonymous","A14Q K87G P149Q",3
"lib1","SARS-CoV-2","TACCTTGAATATAATT",3,11.01,6,-4.76,2,3,1.27,0.02,">1 nonsynonymous","K56S C61W G86A I104D D112L",5
"lib1","SARS-CoV-2","TACCTTGACCGAGACT",4,63.13,10.08,-0.68,0.07,2.6,1.03,0,">1 nonsynonymous","A18M S41P",2
"lib1","SARS-CoV-2","TACCTTGAGGCCCGCC",2,37.71,10.85,0.08,0.12,2.85,1.08,0.01,">1 nonsynonymous","L122Q S147Q K198L",3
"lib1","SARS-CoV-2","TACCTTTAAACCATTT",1,6.49,8.17,-2.6,0.34,1.5,1,0.03,">1 nonsynonymous","P54R W106E L131M",3
"lib1","SARS-CoV-2","TACCTTTAAGTAGAAA",5,29.04,6,-4.76,1.19,1.5,1.14,0.02,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","TACCTTTAATAGAATA",1,68.58,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S45L G86V N107F",3
"lib1","SARS-CoV-2","TACCTTTAATTAGGAA",6,119.11,10.79,0.02,0.08,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACCTTTCCAACTGCC",4,57.42,10.72,-0.04,0.05,2.91,1.04,0,"1 nonsynonymous","D97H",1
"lib1","SARS-CoV-2","TACCTTTGACAAACAA",8,1.5,NA,NA,NA,NA,NA,NA,"stop","D68K P169L V173N L183* H189T",5
"lib1","SARS-CoV-2","TACCTTTGAGTAAAAA",9,86.27,10.22,-0.54,0.05,2.86,1.02,0,">1 nonsynonymous","A14D F44Y",2
"lib1","SARS-CoV-2","TACCTTTGCCAGAAAA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","R16Q K48F T85* W106* A190R",5
"lib1","SARS-CoV-2","TACCTTTGGTGTACCT",2,49.65,10.81,0.05,0.08,2.86,1.11,0,">1 nonsynonymous","I2F V37W",2
"lib1","SARS-CoV-2","TACCTTTGTGGCATGG",5,64.33,8.4,-2.36,0.17,1.97,1.14,0.01,">1 nonsynonymous","S113A L122F I142S S164Y",4
"lib1","SARS-CoV-2","TACGAAAAAATTTGAA",2,33.09,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","D112K G155E Y159W",3
"lib1","SARS-CoV-2","TACGAAAACAATGAAG",1,36.35,10.75,-0.01,0.08,2.85,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGAAAACCCATATA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","L5K Y39Q K87* D112L",4
"lib1","SARS-CoV-2","TACGAAAACCGAGACG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72V N118H T201K",3
"lib1","SARS-CoV-2","TACGAAAATAAGAAAG",2,59.09,9.33,-1.44,0.11,1.77,1.16,0.01,">1 nonsynonymous","I28A C61F D90A",3
"lib1","SARS-CoV-2","TACGAAACAGCAGGGA",3,26.95,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","P82N D112S S139T P149Y",4
"lib1","SARS-CoV-2","TACGAAACGCGAGTCG",1,17.95,10.84,0.08,0.11,2.94,1,0,">1 nonsynonymous","L60G L111I G196R",3
"lib1","SARS-CoV-2","TACGAAACGTACCCGC",4,64.77,10.04,-0.73,0.09,2.39,1.02,0,">1 nonsynonymous","F99Y N120M",2
"lib1","SARS-CoV-2","TACGAAACTTTCACAA",1,5.39,8.8,-1.97,0.27,1.86,1.16,0.04,"1 nonsynonymous","V11K",1
"lib1","SARS-CoV-2","TACGAAAGATTGTAAA",3,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G L60F P96L P161S F167L",5
"lib1","SARS-CoV-2","TACGAAAGCAGGGATA",4,37.45,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V103W Y121N S129L",3
"lib1","SARS-CoV-2","TACGAAATAAGAGTCT",4,98.71,10.25,-0.51,0.05,2.82,1.05,0,">1 nonsynonymous","N4I Y35L S41R L60H P149S",5
"lib1","SARS-CoV-2","TACGAAATATATGGCG",2,26.31,10.29,-0.48,0.17,2.23,1.06,0.01,">1 nonsynonymous","L60R V180L H189N",3
"lib1","SARS-CoV-2","TACGAAATTGTAAATG",3,222.57,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K56V F62S W106I Y175E",4
"lib1","SARS-CoV-2","TACGAACAATCTACAT",2,10.44,6,-4.76,2,2.72,1.19,0.01,">1 nonsynonymous","N40C T63M I72S K128W G146W K199L",6
"lib1","SARS-CoV-2","TACGAACACTACCCTA",4,143.38,10.73,-0.03,0.06,2.85,1.09,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","TACGAACAGAAAAATG",1,8.35,11.07,0.3,0.1,2.92,1,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","TACGAACCAAAACGTA",8,134.09,9.9,-0.86,0.06,2.75,1.07,0,">1 nonsynonymous","N30L T170S",2
"lib1","SARS-CoV-2","TACGAACCCACTAATT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A89* T100P",2
"lib1","SARS-CoV-2","TACGAACGACTATCCA",2,26.02,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","S69L A81Q F156T F167M G174V",5
"lib1","SARS-CoV-2","TACGAACTCAGATATG",10,94.91,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D98V N107H D137S Y178I",4
"lib1","SARS-CoV-2","TACGAAGAATCAGGAT",1,13.25,10.73,-0.03,0.1,2.99,1,0,">1 nonsynonymous","E10D G152L",2
"lib1","SARS-CoV-2","TACGAAGAATCATATT",16,36.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R A42L E76C T85L G146L",5
"lib1","SARS-CoV-2","TACGAAGAATGTGACG",4,36.29,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","E10Y A105D",2
"lib1","SARS-CoV-2","TACGAAGAGAGGTACG",1,47.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L122V K128S G146P G152Y",4
"lib1","SARS-CoV-2","TACGAAGATGGCAAAC",2,2.34,NA,NA,NA,NA,NA,NA,"stop","T85A V103S Y143* T170V",4
"lib1","SARS-CoV-2","TACGAAGCATGAAACA",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80F A105L T148L T201D",4
"lib1","SARS-CoV-2","TACGAAGGACTCAATA",5,74.89,10.82,0.06,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGAAGTCGTCCATA",2,23.97,10.66,-0.11,0.08,2.93,1,0,"1 nonsynonymous","G116D",1
"lib1","SARS-CoV-2","TACGAAGTTGCCTGAC",10,141.13,8.04,-2.73,0.21,1.5,1.12,0.01,">1 nonsynonymous","G51P N109C",2
"lib1","SARS-CoV-2","TACGAATAAACGGTCC",4,34.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61V G86A T170F",3
"lib1","SARS-CoV-2","TACGAATACCAAAAAG",9,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S I88T Y143I P149R",4
"lib1","SARS-CoV-2","TACGAATATTTCGATG",8,56.66,10.59,-0.17,0.08,2.9,1.02,0,"1 nonsynonymous","N4I",1
"lib1","SARS-CoV-2","TACGAATCGAAAACTA",1,38.14,9.44,-1.32,0.07,2.84,1.1,0,">1 nonsynonymous","A14S Y119N",2
"lib1","SARS-CoV-2","TACGAATCTAAAGATA",3,12.71,10.59,-0.18,0.13,2.77,1.12,0.01,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","TACGAATGCGACAGTT",3,21.95,10.79,0.02,0.08,2.9,1,0,">1 nonsynonymous","I28L G116N",2
"lib1","SARS-CoV-2","TACGAATTCCCATACA",5,76.29,10.72,-0.05,0.05,2.87,1.08,0,">1 nonsynonymous","F62Y S200W",2
"lib1","SARS-CoV-2","TACGAATTGTCTACAA",2,24.88,10.38,-0.38,0.07,2.75,1.02,0,">1 nonsynonymous","N1Y A42W S129V",3
"lib1","SARS-CoV-2","TACGAATTTGAAGCAA",3,16.76,9.71,-1.06,0.27,1.5,1.24,0.04,">1 nonsynonymous","T3G Y91G T140R T201G",4
"lib1","SARS-CoV-2","TACGACAAATGAAACC",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19V A33L A105V W106Q",4
"lib1","SARS-CoV-2","TACGACAAGTAGCAAC",1,25.54,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20R S41L K56T Y91H W106G Y123K",6
"lib1","SARS-CoV-2","TACGACAATATACTTG",4,33.26,9.59,-1.17,0.12,1.97,1.12,0.01,">1 nonsynonymous","A89S D97S G155C",3
"lib1","SARS-CoV-2","TACGACACGATATTTT",1,52.61,10.36,-0.4,0.08,2.87,1.01,0,">1 nonsynonymous","L60S N120S V173A",3
"lib1","SARS-CoV-2","TACGACACTTATGTCG",6,0.95,NA,NA,NA,NA,NA,NA,"stop","C61* K94R N109R Y119R T140I",5
"lib1","SARS-CoV-2","TACGACAGACTCTGAA",4,137.17,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S113K Y119E Q168V P177M",4
"lib1","SARS-CoV-2","TACGACATATACGATT",8,147.08,8.55,-2.22,0.11,2.2,1.09,0,">1 nonsynonymous","Y35F S139P",2
"lib1","SARS-CoV-2","TACGACATCATTCCAT",3,17.51,10.74,-0.03,0.11,2.8,1.11,0,"1 nonsynonymous","P197L",1
"lib1","SARS-CoV-2","TACGACATGTTGCTTG",8,63.31,6.68,-4.09,0.22,1.5,1.11,0.01,">1 nonsynonymous","V77K N118L S139R S164E",4
"lib1","SARS-CoV-2","TACGACCCTCTCAGGG",4,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G G83M W106Q C158T Y165F",5
"lib1","SARS-CoV-2","TACGACCGACACCTAG",1,7.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","TACGACGAACCTATGC",1,31.47,9.2,-1.57,0.38,1.5,1,0.05,">1 nonsynonymous","C61E F126L C150R",3
"lib1","SARS-CoV-2","TACGACGAAGTCTAAA",7,2.23,NA,NA,NA,NA,NA,NA,"stop","A22V T55K G83C G146*",4
"lib1","SARS-CoV-2","TACGACGACTCCATTG",5,5.46,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","TACGACGAGCTGTTTA",9,97.93,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G86L L122R Q176N T201L",4
"lib1","SARS-CoV-2","TACGACGGCGTTATAT",8,130.03,10.77,0,0.07,2.91,1.05,0,"1 nonsynonymous","P197E",1
"lib1","SARS-CoV-2","TACGACGGTATACTTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L K114H H189C",3
"lib1","SARS-CoV-2","TACGACTAAAGTAGAA",3,71.31,10.54,-0.23,0.03,2.92,1.05,0,">1 nonsynonymous","L5T Q84H T85S",3
"lib1","SARS-CoV-2","TACGACTAAGTGCCAA",1,16.05,10.86,0.09,0.09,2.93,1.08,0,">1 nonsynonymous","N64Y Y123K S129N",3
"lib1","SARS-CoV-2","TACGACTCTCATAAGC",5,73.17,10.09,-0.67,0.07,2.05,1.04,0,">1 nonsynonymous","S36K V52N T100I",3
"lib1","SARS-CoV-2","TACGACTTGACATATA",5,46.16,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","V71L Q84L F99S S113M Y121N T170Y",6
"lib1","SARS-CoV-2","TACGACTTTGCACTAC",3,9.27,8.84,-1.92,0.23,1.5,1.06,0.02,">1 nonsynonymous","F17R K198C",2
"lib1","SARS-CoV-2","TACGAGAAGAAACCAG",6,11.84,NA,NA,NA,NA,NA,NA,"stop","N130* T201E",2
"lib1","SARS-CoV-2","TACGAGACAAATTGAC",2,0.94,NA,NA,NA,NA,NA,NA,"stop","K56* C61V A105G",3
"lib1","SARS-CoV-2","TACGAGAGTATTACAG",5,42.75,6.3,-4.47,0.64,1.5,1.13,0.03,">1 nonsynonymous","C6W Y165E G172E",3
"lib1","SARS-CoV-2","TACGAGAGTGCCTTGA",2,22.19,10.7,-0.06,0.18,2.59,1.38,0.01,">1 nonsynonymous","N4S T201G",2
"lib1","SARS-CoV-2","TACGAGATAATGACTG",6,72.6,10.71,-0.05,0.07,2.88,1.07,0,">1 nonsynonymous","G9A V37F D90E",3
"lib1","SARS-CoV-2","TACGAGATACGCTATG",6,51.79,9.92,-0.84,0.12,2.37,1.07,0.01,">1 nonsynonymous","A33V S41G S129T F167Y",4
"lib1","SARS-CoV-2","TACGAGATCTAACTCG",1,15.88,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","F70E N107Q Q176R",3
"lib1","SARS-CoV-2","TACGAGATGAAGACAA",14,270.56,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D98T P177I",2
"lib1","SARS-CoV-2","TACGAGATGTAATCTA",9,112.14,10.87,0.11,0.09,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGAGATTCACTAAT",7,63,9.14,-1.62,0.14,1.66,1.09,0.01,">1 nonsynonymous","W106Q Y121Q",2
"lib1","SARS-CoV-2","TACGAGCACCCGCAAT",7,59.46,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9E D90V V115L L125T K128N F134V",6
"lib1","SARS-CoV-2","TACGAGCACGATGCAA",3,73.5,8.61,-2.15,0.1,1.9,1.15,0,">1 nonsynonymous","P7H N40W D97I G116D G146S F160D",6
"lib1","SARS-CoV-2","TACGAGCGTTCATTAA",2,81.7,10.81,0.04,0.04,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGAGCTTGCTAGGA",1,13.42,10.53,-0.24,0.12,2.67,1,0.01,"1 nonsynonymous","S69M",1
"lib1","SARS-CoV-2","TACGAGGAAAAATCCA",1,23.23,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S29V F44Y N64E Y91E A145D",5
"lib1","SARS-CoV-2","TACGAGGCAACAAGAA",2,12.27,10.76,0,0.14,2.88,1.06,0.01,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TACGAGGCTAAAACAT",3,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F F47S L131W N151S",4
"lib1","SARS-CoV-2","TACGAGGCTAGGTGCG",5,2.81,NA,NA,NA,NA,NA,NA,"stop","T3S D59L A89T D97*",4
"lib1","SARS-CoV-2","TACGAGGGAAGTGCAT",3,56.51,6,-4.76,2,1.5,1.42,0.06,">1 nonsynonymous","R25V Y35M N118C L188N",4
"lib1","SARS-CoV-2","TACGAGGTGAGATACG",10,47.23,6,-4.76,0.79,1.5,1.15,0.01,">1 nonsynonymous","Y143P R179K A190I T201L",4
"lib1","SARS-CoV-2","TACGAGGTGGTTTCGC",10,87.78,9.66,-1.11,0.12,1.7,1.06,0.01,"1 nonsynonymous","R25N",1
"lib1","SARS-CoV-2","TACGAGTATCACATAT",1,36.92,6.41,-4.35,0.44,1.5,1.09,0.01,">1 nonsynonymous","F12Y S45P Y50C G101R Y123S",5
"lib1","SARS-CoV-2","TACGAGTCCAGTGCGC",8,1.35,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","TACGAGTCCATCTTCG",6,0.41,NA,NA,NA,NA,NA,NA,"stop","D68* K128V",2
"lib1","SARS-CoV-2","TACGAGTCCTACACAC",3,45.84,10.69,-0.08,0.06,2.94,1.06,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","TACGAGTGACAGTCTA",8,71.61,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","A33K A89L F99K T148I Y175K",5
"lib1","SARS-CoV-2","TACGAGTTAATCATAC",1,22.01,8.53,-2.23,0.18,1.7,1.23,0.02,">1 nonsynonymous","V37D Q84R N107G K128L",4
"lib1","SARS-CoV-2","TACGAGTTGATACTAA",1,23.36,9.58,-1.19,0.24,1.74,1.08,0.03,"1 nonsynonymous","F12D",1
"lib1","SARS-CoV-2","TACGATAAACCATGGT",3,101.8,9.79,-0.97,0.09,2.28,1.08,0,">1 nonsynonymous","N4T T15D V32K S129A G152C",5
"lib1","SARS-CoV-2","TACGATAAGGAATACG",6,71.02,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86F R136S Y143P",3
"lib1","SARS-CoV-2","TACGATAATTTGAGGA",6,105.05,9.1,-1.67,0.14,1.57,1.13,0.01,">1 nonsynonymous","A14V R27G K132S",3
"lib1","SARS-CoV-2","TACGATACTTCATGAA",1,25.75,10.49,-0.28,0.07,2.93,1.04,0,">1 nonsynonymous","S43Y L122H G174T",3
"lib1","SARS-CoV-2","TACGATAGACTCAACT",5,307.56,10.76,0,0.05,2.94,1.03,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","TACGATCACCTAGCGC",2,10.39,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S45G I72S S113H R136G",4
"lib1","SARS-CoV-2","TACGATCATCAAACTA",3,30.98,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9M R16F S41L L60S A105R C158S",6
"lib1","SARS-CoV-2","TACGATGAACCGTGCT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5N S69* I88P T100K K198H",5
"lib1","SARS-CoV-2","TACGATGAACTACTGT",5,17.29,10.75,-0.01,0.26,2.62,1.06,0.03,"1 nonsynonymous","N1T",1
"lib1","SARS-CoV-2","TACGATGACAAGAGAT",6,34.82,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N1A W23L P82T Q144V",4
"lib1","SARS-CoV-2","TACGATGATAACCACC",6,30.97,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","V37E F70I R124S Q144T",4
"lib1","SARS-CoV-2","TACGATGGGTGCTTCT",9,30.35,6.27,-4.5,0.78,1.5,1.11,0.04,">1 nonsynonymous","D68L N157G",2
"lib1","SARS-CoV-2","TACGATGTTTAATCAC",9,2.93,NA,NA,NA,NA,NA,NA,"stop","F44* Y66A V77K D112V G152R",5
"lib1","SARS-CoV-2","TACGATTAAGGACTTA",1,12.27,8.04,-2.72,0.31,1.82,1.04,0.02,">1 nonsynonymous","S41P F167L",2
"lib1","SARS-CoV-2","TACGATTACCGAAATC",5,77.23,10.51,-0.26,0.06,2.93,1.02,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","TACGATTAGAAAAATA",2,75,10.86,0.1,0.08,2.92,1.04,0,">1 nonsynonymous","F160S S200M",2
"lib1","SARS-CoV-2","TACGATTCCCGCCGCA",6,47.37,10.54,-0.22,0.08,2.92,1.01,0,">1 nonsynonymous","Y35L S43V L122K P169S V182C",5
"lib1","SARS-CoV-2","TACGATTTAGCAGACT",5,97.75,10.56,-0.2,0.03,2.93,1.02,0,"1 nonsynonymous","N30W",1
"lib1","SARS-CoV-2","TACGATTTGGAACGAG",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58T N171I P197K",3
"lib1","SARS-CoV-2","TACGCAAAAATAGAAC",3,45.22,10.62,-0.14,0.08,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGCAAACGATAAAC",1,13.17,10.59,-0.18,0.08,2.89,1.06,0.01,">1 nonsynonymous","F8M T201Y",2
"lib1","SARS-CoV-2","TACGCAAACGCTAGAT",6,77.42,10.52,-0.24,0.04,2.93,1.04,0,">1 nonsynonymous","S29P A42L",2
"lib1","SARS-CoV-2","TACGCAAGCCAGCATA",7,257.84,9.69,-1.08,0.04,2.87,1.05,0,"1 nonsynonymous","Y143V",1
"lib1","SARS-CoV-2","TACGCAAGCGCTATTA",5,85.26,10.64,-0.13,0.04,2.96,1.01,0,"1 nonsynonymous","D59M",1
"lib1","SARS-CoV-2","TACGCAATAGTGCACA",8,31.1,9.56,-1.2,0.17,1.78,1.09,0.01,">1 nonsynonymous","N13K R127A",2
"lib1","SARS-CoV-2","TACGCAATGAAAGAAA",1,9.97,6,-4.76,2,3,1.11,0,">1 nonsynonymous","K94A Q168P",2
"lib1","SARS-CoV-2","TACGCAATGACAATAG",4,0.86,NA,NA,NA,NA,NA,NA,"stop","A33I N64H R127*",3
"lib1","SARS-CoV-2","TACGCACAACCCACAG",2,38.74,10.81,0.04,0.08,2.85,1.06,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","TACGCACACTACAGAC",3,5.6,NA,NA,NA,NA,NA,NA,"stop","N40* L60R T201D",3
"lib1","SARS-CoV-2","TACGCACCTTTCCTGG",6,58.81,10.72,-0.04,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGCACGAATTCTGC",2,7.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V52L N107V F156W",3
"lib1","SARS-CoV-2","TACGCACGATGACCTA",6,158.31,9.98,-0.78,0.08,2.32,1.04,0,"1 nonsynonymous","Y21I",1
"lib1","SARS-CoV-2","TACGCACTGTTATCTA",1,0.75,NA,NA,NA,NA,NA,NA,"stop","V37L I104* L131S",3
"lib1","SARS-CoV-2","TACGCAGAAAGGGATA",3,62.78,10.66,-0.1,0.08,2.9,1.06,0,">1 nonsynonymous","G83Q F160Q",2
"lib1","SARS-CoV-2","TACGCAGAGCTTCCCT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","P7T E141R T170*",3
"lib1","SARS-CoV-2","TACGCAGATATCAAAT",8,207.29,9.79,-0.97,0.1,1.79,1.08,0,">1 nonsynonymous","V37S T46A S139Y",3
"lib1","SARS-CoV-2","TACGCAGATTGTGACA",9,138.77,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48R R136A I142P F156S Y175L",5
"lib1","SARS-CoV-2","TACGCAGTACAAGGAA",1,7.13,10.9,0.13,0.07,3,1.02,0,"1 nonsynonymous","G152S",1
"lib1","SARS-CoV-2","TACGCAGTCGGCGGCT",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T F167A",2
"lib1","SARS-CoV-2","TACGCATAAACCGATG",2,1.14,NA,NA,NA,NA,NA,NA,"stop","P7T C31M V77*",3
"lib1","SARS-CoV-2","TACGCATAACACGTAC",10,43.29,6.74,-4.02,0.52,1.5,1.15,0.05,"1 nonsynonymous","V103W",1
"lib1","SARS-CoV-2","TACGCATAACGGCTTG",5,9.7,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I104D R179I",2
"lib1","SARS-CoV-2","TACGCATCAGACTATA",6,112.9,10.57,-0.2,0.05,2.92,1.04,0,">1 nonsynonymous","G9K S41L T148N",3
"lib1","SARS-CoV-2","TACGCATTGACCCATA",2,25.21,6.39,-4.37,0.4,1.5,1.26,0.01,">1 nonsynonymous","C6F A22M G51A K87A",4
"lib1","SARS-CoV-2","TACGCATTTCATTTGT",2,25.01,10.1,-0.66,0.13,2.1,1.08,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","TACGCCAAAAAATAAT",1,32.35,10.65,-0.11,0.08,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGCCACCCAAGAGT",16,310.3,8.73,-2.03,0.08,2.82,1.09,0,">1 nonsynonymous","D90S K114E Y119I",3
"lib1","SARS-CoV-2","TACGCCACGTTTTTAT",2,8.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47N N58R P96S F126Y K132L",5
"lib1","SARS-CoV-2","TACGCCAGTTCCCGTT",2,58.26,9.31,-1.45,0.07,2.79,1.08,0,">1 nonsynonymous","L5M D97E Y119L",3
"lib1","SARS-CoV-2","TACGCCATATTAGTGG",2,13.94,6.52,-4.24,0.45,1.6,1.09,0.02,">1 nonsynonymous","I88M R124H",2
"lib1","SARS-CoV-2","TACGCCCAACCGAGAA",8,55.88,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S113Y G146C R179F T201S",4
"lib1","SARS-CoV-2","TACGCCCACATCGATG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","P96C Y119I E135* P149Q",4
"lib1","SARS-CoV-2","TACGCCCCTTATCAAA",10,219.89,10.78,0.01,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGCCCTTTCTACTA",2,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G R25S A89V Y121R S129L",5
"lib1","SARS-CoV-2","TACGCCGATAAATATT",3,23.85,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S19V A81S A89M",3
"lib1","SARS-CoV-2","TACGCCGATTAATAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib1","SARS-CoV-2","TACGCCGCCCTGACCC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","G86* N130K G166K",3
"lib1","SARS-CoV-2","TACGCCGTTAACAACA",4,55.33,9.37,-1.39,0.15,1.74,1.16,0.01,">1 nonsynonymous","Y39S V103T P149S",3
"lib1","SARS-CoV-2","TACGCCTAAATAAGGA",2,5.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144E",1
"lib1","SARS-CoV-2","TACGCCTACTAAAGAA",7,66.76,10.18,-0.58,0.05,2.9,1.05,0,">1 nonsynonymous","G9N D59W Q168N",3
"lib1","SARS-CoV-2","TACGCCTAGACTAAGC",2,16.86,6.05,-4.72,1.31,1.5,1.26,0.07,">1 nonsynonymous","T15L D59P F99Y S164D",4
"lib1","SARS-CoV-2","TACGCCTCAAATGTAC",3,5.1,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","S113R N157S T170C",3
"lib1","SARS-CoV-2","TACGCCTTACATTATA",10,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L G116W T140C T201R",4
"lib1","SARS-CoV-2","TACGCCTTCGCCATGG",3,0.36,NA,NA,NA,NA,NA,NA,"stop","T85M N92I G116K G174* S200Y",5
"lib1","SARS-CoV-2","TACGCGAAAATCAAAG",11,102.2,9.91,-0.85,0.03,2.88,1.04,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","TACGCGAAATCCTAAA",1,15.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L60R N107S F167S",3
"lib1","SARS-CoV-2","TACGCGACCTTTAAAG",1,27.37,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","G9L Y93C P149N E154K",4
"lib1","SARS-CoV-2","TACGCGAGTTCCTAAA",3,104.38,10.6,-0.17,0.04,2.9,1.03,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","TACGCGATTATTGTCA",3,39.58,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A67C S108F",2
"lib1","SARS-CoV-2","TACGCGGGCACGTGAT",5,171.87,8.66,-2.1,0.1,2.6,1.09,0,">1 nonsynonymous","A14R C61A N118T Y123R",4
"lib1","SARS-CoV-2","TACGCGTGCATAGCAA",10,185.79,9.29,-1.48,0.06,2.86,1.1,0,">1 nonsynonymous","G155D G174Q",2
"lib1","SARS-CoV-2","TACGCTAACCACTGTG",6,67.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D97L N107I R179K",3
"lib1","SARS-CoV-2","TACGCTAATCGCGGTA",3,26.21,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6Y S129V R136S L162D",4
"lib1","SARS-CoV-2","TACGCTAATGAGCATA",2,27.17,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L38P G116W K128R I142S",4
"lib1","SARS-CoV-2","TACGCTACAGCCCGCT",2,92.36,10.86,0.09,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGCTACCATATGGT",2,13.07,10.74,-0.02,0.08,2.87,1.08,0.01,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","TACGCTCACTTAATGA",5,51.73,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V11T N120R R127P I142R S147P G172M",6
"lib1","SARS-CoV-2","TACGCTCCAACCCTCC",9,3.49,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","TACGCTCTAGATGATT",2,24.53,9.21,-1.55,0.32,1.5,1.17,0.04,">1 nonsynonymous","V11M T100K A105V",3
"lib1","SARS-CoV-2","TACGCTCTATATTTAC",2,7.03,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","R27V I72Y",2
"lib1","SARS-CoV-2","TACGCTCTGTGTGATA",10,88.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8G D112S",2
"lib1","SARS-CoV-2","TACGCTCTTGCAATAC",4,43.44,6.93,-3.83,0.42,1.5,1.14,0.04,">1 nonsynonymous","R73K A89R Y165K T170V Q176S",5
"lib1","SARS-CoV-2","TACGCTCTTGCACTTC",1,10.1,10.2,-0.57,0.16,2.65,1.23,0.01,">1 nonsynonymous","C6N D34N N171T",3
"lib1","SARS-CoV-2","TACGCTCTTTAAGAAT",1,15.37,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","F47C K56C L95H L122H",4
"lib1","SARS-CoV-2","TACGCTGCGACGCGAG",1,20.55,10.15,-0.61,0.09,2.86,1,0,"1 nonsynonymous","G83V",1
"lib1","SARS-CoV-2","TACGCTGGGAAACTTC",3,27.54,10.81,0.05,0.1,3,1,0,"1 nonsynonymous","H189P",1
"lib1","SARS-CoV-2","TACGCTGGGCCACCCT",3,53.09,9.98,-0.79,0.08,2.34,1.07,0,"1 nonsynonymous","W106T",1
"lib1","SARS-CoV-2","TACGCTGTTATCCGGT",1,31.66,10.71,-0.05,0.08,3,1,0,">1 nonsynonymous","I28M N58P",2
"lib1","SARS-CoV-2","TACGCTTACTAAAAAC",7,179.14,10.02,-0.74,0.08,2.76,1.03,0,">1 nonsynonymous","C31S K128T",2
"lib1","SARS-CoV-2","TACGCTTCAGGCCAAA",1,23.45,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","I2T Y93S",2
"lib1","SARS-CoV-2","TACGCTTCGAATTTCC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","G9* V103H G117I F134L P149S G155N",6
"lib1","SARS-CoV-2","TACGCTTCGTTTGTTG",2,5.8,10.3,-0.47,0.13,2.66,1.24,0.01,">1 nonsynonymous","V32E S43N",2
"lib1","SARS-CoV-2","TACGCTTCTGCGCGGA",3,14.96,9.37,-1.39,0.16,2.99,1.02,0.01,"1 nonsynonymous","G146Q",1
"lib1","SARS-CoV-2","TACGCTTGAGTCTTTT",2,7.92,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A18K K94E F134R T201V",4
"lib1","SARS-CoV-2","TACGGAAAAATTTCCC",1,35.89,10.27,-0.49,0.08,2.65,1.02,0,">1 nonsynonymous","L38F W106M",2
"lib1","SARS-CoV-2","TACGGAATACACCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","E76K I88M L95* K128I",4
"lib1","SARS-CoV-2","TACGGAATACATTTCA",6,14.03,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","C49K K56W P197R",3
"lib1","SARS-CoV-2","TACGGAATCTGTGACC",2,48.53,10.15,-0.61,0.11,2.59,1.04,0,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","TACGGAATTGCAATCT",4,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I G51R P96Y V103H",4
"lib1","SARS-CoV-2","TACGGACCAACGGTGC",4,43.75,10.46,-0.31,0.07,2.89,1.04,0,">1 nonsynonymous","G83R A89S",2
"lib1","SARS-CoV-2","TACGGACTTGCGTTTG",3,51.18,10.79,0.02,0.09,2.9,1,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","TACGGAGAAGATACGG",1,41.81,8.63,-2.13,0.1,2.32,1.09,0,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","TACGGAGACGATTAAC",6,93.11,6.45,-4.32,0.27,1.5,1.19,0.01,">1 nonsynonymous","R73K C150V",2
"lib1","SARS-CoV-2","TACGGAGGATTGATGA",3,26.16,6.92,-3.85,0.21,1.59,1.14,0.01,">1 nonsynonymous","A67T L162Q",2
"lib1","SARS-CoV-2","TACGGATAGGAATGGG",4,26.18,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T63K I104K S113P N130S T140V T148A",6
"lib1","SARS-CoV-2","TACGGATAGTCTAAAA",7,0.21,NA,NA,NA,NA,NA,NA,"stop","T55W T63*",2
"lib1","SARS-CoV-2","TACGGATATAGTCTGT",6,138.34,10.79,0.02,0.07,2.93,1.04,0,"1 nonsynonymous","F62T",1
"lib1","SARS-CoV-2","TACGGATGCCATCTAT",4,44.32,10.25,-0.52,0.05,2.92,1,0,">1 nonsynonymous","N4T Y35S",2
"lib1","SARS-CoV-2","TACGGATGGACCCCAA",2,53.9,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Q79R G83N S139N G152C Q163T Y178D",6
"lib1","SARS-CoV-2","TACGGATGTTTCACCC",5,0.3,NA,NA,NA,NA,NA,NA,"stop","N13* I88H K198R",3
"lib1","SARS-CoV-2","TACGGATTATAACCAA",3,53.79,10.48,-0.28,0.06,2.85,1,0,">1 nonsynonymous","A42Q S108C",2
"lib1","SARS-CoV-2","TACGGATTATCTTTGT",1,15.22,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","N4L R73D D90L",3
"lib1","SARS-CoV-2","TACGGCACATTCCGTG",4,0.3,NA,NA,NA,NA,NA,NA,"stop","Y50F Q84L G174*",3
"lib1","SARS-CoV-2","TACGGCATTACATAAC",6,16.8,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","E10I F99S",2
"lib1","SARS-CoV-2","TACGGCCAAAGATTGG",5,206.26,10.02,-0.75,0.11,2.08,1.06,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","TACGGCCACACAAAAA",5,64.78,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F17L N107F F134W",3
"lib1","SARS-CoV-2","TACGGCCCATCTGGGA",6,61.48,8.9,-1.86,0.12,2.21,1.13,0.01,">1 nonsynonymous","Q84C S129T P177S",3
"lib1","SARS-CoV-2","TACGGCCCTCTCCTCG",5,121.56,8.08,-2.68,0.15,2.52,1.12,0.01,">1 nonsynonymous","F62W C158S",2
"lib1","SARS-CoV-2","TACGGCCTGTCTACCG",6,82.32,6.71,-4.05,0.31,1.5,1.14,0.01,">1 nonsynonymous","N1Q T170Q Y175L",3
"lib1","SARS-CoV-2","TACGGCGCTTCAAAGT",2,51.83,8.19,-2.57,0.26,1.93,1.14,0.03,">1 nonsynonymous","T3E P161D",2
"lib1","SARS-CoV-2","TACGGCTATGAAGCTA",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94T Y119F K132E",3
"lib1","SARS-CoV-2","TACGGGAATGCAGTTT",13,74.55,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","W106P K132L",2
"lib1","SARS-CoV-2","TACGGGACAACCACCA",3,104.68,9.79,-0.97,0.07,2.12,1.04,0,">1 nonsynonymous","I28E S43F",2
"lib1","SARS-CoV-2","TACGGGATCACATTAT",3,47.66,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N92K S139A T201N",3
"lib1","SARS-CoV-2","TACGGGCCCGGATAAG",2,101.67,10.7,-0.07,0.09,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGGGCGCATCAGTC",2,25.4,8.27,-2.49,0.42,1.5,1.03,0.06,">1 nonsynonymous","S36L Y39H F99L",3
"lib1","SARS-CoV-2","TACGGGCGCTTAGACT",5,71.92,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9F Y119C P161T",3
"lib1","SARS-CoV-2","TACGGGTCAAATAAAG",1,17.26,10.79,0.02,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGGTAAATTAATTG",9,78.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S19F R25A S43W I72T I138G T201P",6
"lib1","SARS-CoV-2","TACGGTAACCAGGGAT",7,42.66,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S19L L60R S113R C158A",4
"lib1","SARS-CoV-2","TACGGTACAAAATGTA",2,57.77,8.47,-2.3,0.13,2.4,1.07,0.01,">1 nonsynonymous","C61S Y143N",2
"lib1","SARS-CoV-2","TACGGTACCAGCCGAT",1,6.69,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","K26E P82I T140F T201V",4
"lib1","SARS-CoV-2","TACGGTACTTTAAGGG",1,13.06,9.91,-0.85,0.12,2.03,1.09,0.01,">1 nonsynonymous","R16M L57R",2
"lib1","SARS-CoV-2","TACGGTAGATTTGATT",1,36.58,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12T G86S Y119S",3
"lib1","SARS-CoV-2","TACGGTATGCACACAT",6,1500.6,8.9,-1.86,0.11,1.78,1.11,0,">1 nonsynonymous","A14V P161S",2
"lib1","SARS-CoV-2","TACGGTCCCACTTGTA",10,2.08,NA,NA,NA,NA,NA,NA,"stop","P133* G174* S200L",3
"lib1","SARS-CoV-2","TACGGTCCCAGTGTTA",8,2.07,NA,NA,NA,NA,NA,NA,"stop","A33S I88A Q168*",3
"lib1","SARS-CoV-2","TACGGTCCGAGACACA",1,6.75,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","L5E D68R D98S D137S C150T",5
"lib1","SARS-CoV-2","TACGGTCGACATATCA",4,9.13,6.13,-4.63,1.72,3,1.18,0.01,">1 nonsynonymous","I104R E141D",2
"lib1","SARS-CoV-2","TACGGTCTCTACTTGC",2,15.89,10.81,0.05,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGGTCTGTCAAGAA",4,2.35,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","TACGGTGAACGATTCA",2,1.81,NA,NA,NA,NA,NA,NA,"stop","T63* E186F",2
"lib1","SARS-CoV-2","TACGGTGAATAGCGCT",5,130.59,6.28,-4.48,0.63,1.5,1.24,0.02,">1 nonsynonymous","S29Y A42K A89L",3
"lib1","SARS-CoV-2","TACGGTGACATCCTAA",1,17.97,6.22,-4.55,0.5,1.5,1.1,0.02,">1 nonsynonymous","N40Y P54R G74E L95N G172S",5
"lib1","SARS-CoV-2","TACGGTGAGAACTAAC",4,24.64,6.19,-4.57,0.61,1.5,1.11,0.02,">1 nonsynonymous","D112E Y123Q C158S V173Q",4
"lib1","SARS-CoV-2","TACGGTGGTCAACCAG",11,3.37,NA,NA,NA,NA,NA,NA,"stop","G9K D59N Y121*",3
"lib1","SARS-CoV-2","TACGGTGTATTAGTAA",5,0.11,NA,NA,NA,NA,NA,NA,"stop","A22S W106G D112G L122*",4
"lib1","SARS-CoV-2","TACGGTTAAAAGACAG",3,20.57,8.19,-2.57,0.42,1.5,1,0.06,">1 nonsynonymous","G86N R136L",2
"lib1","SARS-CoV-2","TACGGTTAACCTCTGA",7,93.01,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35F G74S P161C T201E",4
"lib1","SARS-CoV-2","TACGGTTAATTCTTTG",12,55.99,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61L I80K N107R P149L V153G",5
"lib1","SARS-CoV-2","TACGGTTGACAGGGTG",1,17.53,10.82,0.06,0.07,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGGTTTTAAGCCAT",4,98.03,8.14,-2.62,0.16,1.77,1.18,0.01,">1 nonsynonymous","T15F G117P",2
"lib1","SARS-CoV-2","TACGTAAAAAAGACTG",9,86.6,10.64,-0.13,0.05,2.89,1,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TACGTAAAAATCGTAC",1,88.03,9.85,-0.91,0.09,2.57,1.04,0,">1 nonsynonymous","Y39V Y165W",2
"lib1","SARS-CoV-2","TACGTAAAATAATCAT",1,16.95,8.96,-1.81,0.11,1.87,1.14,0.01,">1 nonsynonymous","G152L P177A H189Y T201N",4
"lib1","SARS-CoV-2","TACGTAAATACTGTAC",5,83.18,10.64,-0.13,0.06,2.93,1.01,0,"1 nonsynonymous","C61P",1
"lib1","SARS-CoV-2","TACGTAAATCCACACA",1,7.66,10.87,0.11,0.14,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGTAACACGGGGCG",7,0.31,NA,NA,NA,NA,NA,NA,"stop","P7D K26W K48* N107F",4
"lib1","SARS-CoV-2","TACGTAACCCACGTCA",6,129.58,10.8,0.03,0.08,2.92,1.03,0,">1 nonsynonymous","D97E V173L",2
"lib1","SARS-CoV-2","TACGTAACGACTATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","TACGTAACGGCTCTTG",6,35.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","W23S F99K T201M",3
"lib1","SARS-CoV-2","TACGTAACTAAGGGAA",2,47.23,10.47,-0.29,0.06,2.9,1.04,0,">1 nonsynonymous","F8L S164L",2
"lib1","SARS-CoV-2","TACGTAACTTATACTA",2,23.95,10.41,-0.35,0.07,2.85,1.06,0,">1 nonsynonymous","R16S G116K S139Q",3
"lib1","SARS-CoV-2","TACGTAAGGCATGTGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R L131M",2
"lib1","SARS-CoV-2","TACGTAATACTGGATC",2,15.16,6.42,-4.35,0.14,1.5,1.03,0,">1 nonsynonymous","L5F S29E Q84K F99R F156Y",5
"lib1","SARS-CoV-2","TACGTAATATCCCGAG",10,80.15,6,-4.76,2,3,1.27,0,">1 nonsynonymous","L5Y C49N P96L",3
"lib1","SARS-CoV-2","TACGTACAGCCGCATG",1,46.48,6.74,-4.02,0.24,1.5,1.14,0.01,">1 nonsynonymous","F8T D34N Y119A G166R Y175H P197R",6
"lib1","SARS-CoV-2","TACGTACCGGTTGAAG",2,33.26,10.47,-0.29,0.09,2.73,1.15,0,">1 nonsynonymous","L60T P149T",2
"lib1","SARS-CoV-2","TACGTACGCAGGTTTA",5,165.71,9.51,-1.26,0.03,2.82,1.08,0,">1 nonsynonymous","K114V P177A",2
"lib1","SARS-CoV-2","TACGTACTACGCATAG",4,19.65,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C61R Q79R A145E F167N V182S",5
"lib1","SARS-CoV-2","TACGTACTATATCAAC",1,21.96,7.69,-3.08,0.32,1.5,1.05,0.04,">1 nonsynonymous","P7F D68E",2
"lib1","SARS-CoV-2","TACGTACTCCATGATG",1,34.65,10.17,-0.6,0.09,2.56,1,0,"1 nonsynonymous","K94M",1
"lib1","SARS-CoV-2","TACGTAGAGAGATTAT",1,28.22,6,-4.76,0.95,3,1.15,0.01,">1 nonsynonymous","V32H F126K G146C",3
"lib1","SARS-CoV-2","TACGTAGATTGCGACA",13,269.76,10.82,0.06,0.09,2.8,1.11,0,">1 nonsynonymous","V37T Q163V",2
"lib1","SARS-CoV-2","TACGTAGCAATTATCT",16,2.41,NA,NA,NA,NA,NA,NA,"stop","Y39* N64A D98V",3
"lib1","SARS-CoV-2","TACGTAGCTAAGGCGG",4,31.47,6,-4.76,2,3,1.11,0,">1 nonsynonymous","A42K T85D V103F K114N V115N",5
"lib1","SARS-CoV-2","TACGTAGGACTCTCTT",4,38.05,10.53,-0.24,0.05,2.94,1.01,0,">1 nonsynonymous","E141T G155R",2
"lib1","SARS-CoV-2","TACGTAGGGAAATCGA",1,10.34,10.94,0.18,0.31,2.55,1.08,0.02,">1 nonsynonymous","G86N T100P G152K",3
"lib1","SARS-CoV-2","TACGTAGTAAAATTAC",5,173.61,10.73,-0.04,0.06,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGTATAAATTTAAA",2,1.68,NA,NA,NA,NA,NA,NA,"stop","C49* F99L K132F",3
"lib1","SARS-CoV-2","TACGTATAACACTACT",2,2.04,NA,NA,NA,NA,NA,NA,"stop","I138* G172E T201C",3
"lib1","SARS-CoV-2","TACGTATAATCATAAA",2,31.76,6.37,-4.4,0.88,1.5,1.29,0.04,">1 nonsynonymous","A14R I88V G117D I138G",4
"lib1","SARS-CoV-2","TACGTATATAAAACTG",3,96.69,10.17,-0.59,0.07,2.68,1.02,0,">1 nonsynonymous","F8T K114W L122S",3
"lib1","SARS-CoV-2","TACGTATATCAAGCAA",5,30.63,9.35,-1.42,0.09,2.16,1.05,0,">1 nonsynonymous","D90E G155L C195K",3
"lib1","SARS-CoV-2","TACGTATATCGACCCG",1,5.58,10.47,-0.29,0.12,2.97,1.01,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","TACGTATATGATTAAA",6,0.91,NA,NA,NA,NA,NA,NA,"stop","N1* L57R Y91G E141V",4
"lib1","SARS-CoV-2","TACGTATCCAGACTGG",3,41.34,7.8,-2.96,0.18,1.61,1.16,0.01,">1 nonsynonymous","W106Y S129R I142R",3
"lib1","SARS-CoV-2","TACGTATCTTGGCCAG",3,41.97,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","Y39P R124S E154L F160M L188S",5
"lib1","SARS-CoV-2","TACGTCAAATACACAT",4,53.05,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G116Y N130M I142D P149S",4
"lib1","SARS-CoV-2","TACGTCAAGAGTCATA",8,80.89,10.68,-0.09,0.04,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGTCAATATACGGA",6,111,6,-4.76,1.04,1.5,1.16,0.01,">1 nonsynonymous","G83T R124L",2
"lib1","SARS-CoV-2","TACGTCACATTGGAAA",16,158.51,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","R179D",1
"lib1","SARS-CoV-2","TACGTCACTCTATATA",7,64.2,6.46,-4.3,0.48,1.5,1.17,0.02,">1 nonsynonymous","P7F K56Q I104Q Q168K G174Y",5
"lib1","SARS-CoV-2","TACGTCATAACTAGTA",3,10.87,6,-4.76,1.19,3,1.29,0.02,">1 nonsynonymous","T3K D34V S69G",3
"lib1","SARS-CoV-2","TACGTCATAACTGAAG",3,7.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L57A N120P R127L D137G",4
"lib1","SARS-CoV-2","TACGTCATAACTGAGT",1,12.19,8.8,-1.96,0.13,2.79,1.02,0.01,">1 nonsynonymous","G9P N118S S139N",3
"lib1","SARS-CoV-2","TACGTCATATCCTACA",6,82.68,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60Q R127Q T140V F185H",4
"lib1","SARS-CoV-2","TACGTCCAAAATACGT",7,28.62,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","Y39S C49F D90C G116K R127L P161W V173R",7
"lib1","SARS-CoV-2","TACGTCCCAAGACACA",3,36.98,8.64,-2.13,0.15,2.37,1.1,0.01,">1 nonsynonymous","S29T S43C G117W S129V",4
"lib1","SARS-CoV-2","TACGTCCCAATACAAT",1,14.35,7.85,-2.92,0.38,1.5,1.14,0.06,">1 nonsynonymous","A33L V103A F156N",3
"lib1","SARS-CoV-2","TACGTCCCCACTCATG",2,22.1,8.01,-2.75,0.28,1.91,1.11,0.05,">1 nonsynonymous","D98S Y123N F160G",3
"lib1","SARS-CoV-2","TACGTCGACTAAACTG",7,104.25,10.75,-0.01,0.08,2.93,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGTCGTCCACACAA",3,18.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50G R73K I104L Y119W Y143I N151V",6
"lib1","SARS-CoV-2","TACGTCTAAGTGCTGT",1,12.1,10.91,0.14,0.12,2.85,1.05,0,">1 nonsynonymous","L122S Q168A",2
"lib1","SARS-CoV-2","TACGTCTATACGAAGG",4,27.82,10.23,-0.53,0.11,2.7,1.09,0,">1 nonsynonymous","A18R N64R",2
"lib1","SARS-CoV-2","TACGTCTCTTCAAAAT",7,166.94,10.68,-0.08,0.04,2.91,1.03,0,">1 nonsynonymous","I2L S41H V52I G152D T201M",5
"lib1","SARS-CoV-2","TACGTCTGAGAATAGT",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D I88L E154L Q168R",4
"lib1","SARS-CoV-2","TACGTCTGCTTCCGCA",4,9.43,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","L5P D112G A145P N151M",4
"lib1","SARS-CoV-2","TACGTCTGTAACGGTG",6,32.69,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K87C W106P D137R",3
"lib1","SARS-CoV-2","TACGTGAAAAACAGGT",2,1.32,NA,NA,NA,NA,NA,NA,"stop","S69W Y93*",2
"lib1","SARS-CoV-2","TACGTGAAAGCCCTTT",1,18.94,7.12,-3.64,0.33,1.93,1.21,0.04,">1 nonsynonymous","V37Y N58M N92L V103Y L125T",5
"lib1","SARS-CoV-2","TACGTGAGACCATGAC",4,46.64,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","A18M L38S L60D N157H",4
"lib1","SARS-CoV-2","TACGTGATATATAACA",4,40.34,10.31,-0.45,0.12,2.9,1.05,0.01,">1 nonsynonymous","Y35T N64D",2
"lib1","SARS-CoV-2","TACGTGATCAAAGCAG",2,39.5,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6S I28V G83N C158N Q176P",5
"lib1","SARS-CoV-2","TACGTGCAATTCAAAA",1,47.09,10.61,-0.15,0.11,2.87,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TACGTGCTATCTAAAA",1,18.75,9.84,-0.92,0.12,2.82,1.1,0.01,">1 nonsynonymous","I2Y R16I C61N Y159W",4
"lib1","SARS-CoV-2","TACGTGCTATGATTAC",1,26.82,8.49,-2.27,0.2,2.33,1,0.02,"1 nonsynonymous","S113P",1
"lib1","SARS-CoV-2","TACGTGTAACTTAAGT",5,57.59,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9K D34S S45R Y119S F167V",5
"lib1","SARS-CoV-2","TACGTGTATGAAGCAG",1,14.84,6.48,-4.29,0.71,1.5,1.16,0.04,">1 nonsynonymous","L5S L57V F99N N151K",4
"lib1","SARS-CoV-2","TACGTGTCCGATATTC",1,44.74,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6G L60P L95A S184T",4
"lib1","SARS-CoV-2","TACGTTAAATATAGGA",5,68.94,6,-4.76,2,3,1.24,0,">1 nonsynonymous","T55S N92K S108G G152I Y178M",5
"lib1","SARS-CoV-2","TACGTTAAGTATTGAG",4,63.35,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L60T A67I I88F S113R Y121S P149Y Q176V",7
"lib1","SARS-CoV-2","TACGTTAATAAAGAAT",3,33.39,10.7,-0.07,0.08,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TACGTTAATACGTACC",5,51.31,10.56,-0.21,0.03,2.93,1.04,0,">1 nonsynonymous","Y66H A192V",2
"lib1","SARS-CoV-2","TACGTTACCGTGGAAT",5,200.64,8.88,-1.88,0.05,2.83,1.08,0,">1 nonsynonymous","Y119L Q144M",2
"lib1","SARS-CoV-2","TACGTTACTATAAGGA",1,22.34,10.76,0,0.06,3,1.02,0,">1 nonsynonymous","Y50F T55G",2
"lib1","SARS-CoV-2","TACGTTAGAAATTAGG",6,103.79,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","K56S T63F I72C K128F V173Y",5
"lib1","SARS-CoV-2","TACGTTAGGGGTATAT",8,117.58,10.71,-0.05,0.05,2.92,1.04,0,"1 nonsynonymous","Q163R",1
"lib1","SARS-CoV-2","TACGTTAGGTAATAGT",4,6.28,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G101W G116W F167N A192P",4
"lib1","SARS-CoV-2","TACGTTATATATAAAC",2,81.18,10.74,-0.03,0.07,2.88,1.09,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","TACGTTATGAAAACAG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A22* D34A T46L G83D T85V D137M",6
"lib1","SARS-CoV-2","TACGTTCACCAAATTA",4,30.33,9.94,-0.83,0.14,1.95,1.07,0.01,">1 nonsynonymous","P7R S45A W106L V173K",4
"lib1","SARS-CoV-2","TACGTTCCATTAAACA",17,179.85,10.55,-0.22,0.04,2.92,1.04,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","TACGTTCCCTATTGAG",15,130.33,6,-4.76,1.65,1.5,1.22,0.02,">1 nonsynonymous","N1I F99T",2
"lib1","SARS-CoV-2","TACGTTCGAGTGACAA",10,84.07,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I2V R16G F99D L125E",4
"lib1","SARS-CoV-2","TACGTTGACTGTTCAT",7,3.05,NA,NA,NA,NA,NA,NA,"stop","N4* L95C G152K",3
"lib1","SARS-CoV-2","TACGTTGCGAGTGATT",5,556.41,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R16Y Y39S F62S Q79W G86V D112E E135P E141I",8
"lib1","SARS-CoV-2","TACGTTGCGGACGAAG",4,37.97,10.51,-0.25,0.08,2.84,1.02,0,"1 nonsynonymous","N107P",1
"lib1","SARS-CoV-2","TACGTTGGCACACGGC",3,126.54,10.25,-0.52,0.06,2.79,1.02,0,">1 nonsynonymous","A14L T55Y",2
"lib1","SARS-CoV-2","TACGTTGGCAGTCTAT",3,16.73,6.09,-4.68,1.01,1.5,1.13,0.05,">1 nonsynonymous","F47S P96M N120S",3
"lib1","SARS-CoV-2","TACGTTGTCTGCGCCA",1,23.16,10.64,-0.13,0.05,2.93,1.05,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","TACGTTTATGATTCCG",3,28.14,6.45,-4.32,0.58,1.5,1.2,0.03,">1 nonsynonymous","T3C Y91S P149V S184Q K198Q",5
"lib1","SARS-CoV-2","TACGTTTCAACGTTAA",3,77.04,9.47,-1.3,0.08,2.45,1.12,0,">1 nonsynonymous","E10C P169F",2
"lib1","SARS-CoV-2","TACGTTTGAAGCACTA",2,67,10.82,0.06,0.06,2.92,1.02,0,">1 nonsynonymous","K48N T201P",2
"lib1","SARS-CoV-2","TACGTTTTACCACATT",8,52.05,6,-4.76,1.21,1.5,1.17,0.02,">1 nonsynonymous","A14G F167H",2
"lib1","SARS-CoV-2","TACTAAAAACACGAAA",7,74.59,9.14,-1.62,0.06,2.81,1.08,0,">1 nonsynonymous","S53D V65T G174V",3
"lib1","SARS-CoV-2","TACTAAAAATTATCCA",3,18.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D C150H",2
"lib1","SARS-CoV-2","TACTAAAACCCTGATG",5,106.85,10.81,0.05,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAAAACGATACAA",4,30.2,6.78,-3.99,0.69,1.5,1.14,0.07,">1 nonsynonymous","C49S K87M P161E T201I",4
"lib1","SARS-CoV-2","TACTAAAACTAAATGG",2,50.49,10.25,-0.51,0.1,2.82,1,0,">1 nonsynonymous","G9H K56L G83D",3
"lib1","SARS-CoV-2","TACTAAAAGAACATAT",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V L122N T140H",3
"lib1","SARS-CoV-2","TACTAAAAGGTAAAAA",4,42.98,10.44,-0.32,0.06,2.88,1.09,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","TACTAAAATAATTACT",5,47.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W23L D112R K128E",3
"lib1","SARS-CoV-2","TACTAAACAGGTATAG",3,25.64,9.12,-1.64,0.18,2.35,1.12,0.01,">1 nonsynonymous","D34K T63E T170A",3
"lib1","SARS-CoV-2","TACTAAACGCCAACCT",3,141.69,10.6,-0.16,0.05,2.85,1.02,0,"1 nonsynonymous","F47Y",1
"lib1","SARS-CoV-2","TACTAAAGACTATATA",4,40.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V71D D97C Y178C T201L",4
"lib1","SARS-CoV-2","TACTAAATAATAGTCG",1,28.06,9.97,-0.79,0.08,2.77,1.05,0,">1 nonsynonymous","Y66V G152I",2
"lib1","SARS-CoV-2","TACTAAATAGGCAGTC",4,97.76,9.82,-0.94,0.06,2.06,1.05,0,"1 nonsynonymous","L38E",1
"lib1","SARS-CoV-2","TACTAAATGAATATGA",3,58.88,10.32,-0.45,0.06,2.96,1,0,">1 nonsynonymous","F62Y G83N K87T P96S",4
"lib1","SARS-CoV-2","TACTAAATGTAACACT",2,57.37,8.92,-1.84,0.09,2.82,1.1,0,">1 nonsynonymous","G116T Y143V",2
"lib1","SARS-CoV-2","TACTAAATGTCCAATT",4,20.84,6.94,-3.82,0.49,1.5,1.21,0.06,"1 nonsynonymous","F70V",1
"lib1","SARS-CoV-2","TACTAAATTGACCCCA",6,45.77,8.22,-2.55,0.21,1.65,1.2,0.01,">1 nonsynonymous","A14Y N171G",2
"lib1","SARS-CoV-2","TACTAACAAAACTTAT",4,117.79,10.72,-0.05,0.05,2.92,1.05,0,">1 nonsynonymous","I2R K56H",2
"lib1","SARS-CoV-2","TACTAACAAATGCACT",2,17.91,8.99,-1.77,0.15,2.81,1.04,0.01,">1 nonsynonymous","Y39R Y159V",2
"lib1","SARS-CoV-2","TACTAACAACATTATA",2,19.19,10.01,-0.75,0.08,2.86,1.04,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","TACTAACACACACCGT",6,105.94,9.97,-0.8,0.06,2.91,1.01,0,">1 nonsynonymous","I142L Y159H",2
"lib1","SARS-CoV-2","TACTAACATATGTGTG",11,23.67,6.46,-4.31,0.77,1.5,1.15,0.05,">1 nonsynonymous","A33I P54W V71E",3
"lib1","SARS-CoV-2","TACTAACATCTGTGTC",5,56.17,10.19,-0.57,0.07,2.84,1.02,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","TACTAACATTTCTCAA",3,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y C49K C61I N107T",4
"lib1","SARS-CoV-2","TACTAACCACATGGCA",3,45.41,10.83,0.06,0.1,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAACCCTGTTATG",3,49.76,6,-4.76,1.54,3,1.13,0,">1 nonsynonymous","S19K S113V",2
"lib1","SARS-CoV-2","TACTAACCCTTACCGT",3,7.3,NA,NA,NA,NA,NA,NA,"stop","S53E Y175*",2
"lib1","SARS-CoV-2","TACTAACGCAAAGCCT",4,39.35,9.64,-1.13,0.13,2.23,1.16,0.01,">1 nonsynonymous","D90L A145G F185L S200F",4
"lib1","SARS-CoV-2","TACTAACGCCAACAGC",9,73.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5P F44M C49V I72M G146N",5
"lib1","SARS-CoV-2","TACTAACTCCATAGGG",4,0,NA,NA,NA,NA,NA,NA,"stop","E141* P149I",2
"lib1","SARS-CoV-2","TACTAACTGGTATACC",4,38.36,9.61,-1.15,0.12,1.8,1.13,0.01,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","TACTAAGAAAGCTAAC",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L L60V S139M L162R P177L L183K",6
"lib1","SARS-CoV-2","TACTAAGAACCTCTAA",5,65.53,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S53E P82R Q84H N120L",4
"lib1","SARS-CoV-2","TACTAAGAACTAAGTC",9,92.51,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V37T F99K Y121L G152N",4
"lib1","SARS-CoV-2","TACTAAGAACTCCTTA",4,36.98,6,-4.76,1.81,1.5,1.24,0.02,">1 nonsynonymous","F12A V37L D90I S129D",4
"lib1","SARS-CoV-2","TACTAAGAAGTTTAAA",2,20.67,10.53,-0.24,0.05,2.95,1.03,0,">1 nonsynonymous","K87R G196V",2
"lib1","SARS-CoV-2","TACTAAGAGTATATAT",10,57.01,10.73,-0.04,0.06,2.83,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAAGATTAAGTGC",2,4.83,NA,NA,NA,NA,NA,NA,"stop","L5T D112* Q163L P177C",4
"lib1","SARS-CoV-2","TACTAAGCAAATGCAG",4,26.04,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","P133S Y178D",2
"lib1","SARS-CoV-2","TACTAAGCCCCACTAA",3,24.42,10.55,-0.21,0.06,2.91,1.1,0,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","TACTAAGGAACACGAA",1,91.72,7.17,-3.6,0.15,1.79,1.13,0.01,">1 nonsynonymous","D98S L125I Y143D T201N",4
"lib1","SARS-CoV-2","TACTAAGGCATAATCT",3,20.53,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N24H F47H L60S D90Y S184K K198I",6
"lib1","SARS-CoV-2","TACTAAGGGAAATATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L G86W V115M Y123D S200R",5
"lib1","SARS-CoV-2","TACTAAGGGGCTGCTA",8,182.2,10.56,-0.21,0.06,2.87,1.07,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","TACTAAGTAACAGTCA",3,47.74,10.5,-0.26,0.09,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAAGTGCTACCCT",2,83.62,9.34,-1.42,0.07,2.83,1.12,0,">1 nonsynonymous","G9E Q168I",2
"lib1","SARS-CoV-2","TACTAAGTTACTATAG",2,22.42,8.1,-2.66,0.35,1.5,1,0.04,">1 nonsynonymous","T3K A89L",2
"lib1","SARS-CoV-2","TACTAAGTTTATTGTA",1,28.88,9.87,-0.9,0.17,2.02,1.05,0.01,">1 nonsynonymous","D59E D90N T100S R127S",4
"lib1","SARS-CoV-2","TACTAATAAATACATG",1,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R L38K G86R L95T",4
"lib1","SARS-CoV-2","TACTAATAACTTTCAC",2,22.87,10.43,-0.33,0.12,2.86,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTAATAAGAACGTA",2,23.52,10.6,-0.17,0.06,2.88,1.08,0,">1 nonsynonymous","C61N D98S",2
"lib1","SARS-CoV-2","TACTAATAATACTGGA",6,91.82,10.66,-0.1,0.04,2.94,1.02,0,"1 nonsynonymous","S41K",1
"lib1","SARS-CoV-2","TACTAATAGTAAGCAC",6,48.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44K D90S R127G L162W",4
"lib1","SARS-CoV-2","TACTAATAGTAATCAA",4,24.5,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","T100M L162S",2
"lib1","SARS-CoV-2","TACTAATATTATTCTT",4,83.34,10.72,-0.04,0.09,2.8,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTAATCACAATTAC",4,54.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T3L P177V",2
"lib1","SARS-CoV-2","TACTAATCTTGAATCC",3,27.25,6.08,-4.69,1.04,1.5,1.19,0.04,">1 nonsynonymous","V37C Y93L",2
"lib1","SARS-CoV-2","TACTAATGAATTAGAG",4,28.89,6,-4.76,2,1.57,1.11,0.01,">1 nonsynonymous","R16D W23L Q84D Y91C N120V I142M Q168S",7
"lib1","SARS-CoV-2","TACTAATGTACTGGAA",5,33.13,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17T N130T Y143D R179K",4
"lib1","SARS-CoV-2","TACTAATTTCTAAAGA",3,0,NA,NA,NA,NA,NA,NA,"stop","F99* N120I T140G",3
"lib1","SARS-CoV-2","TACTACAAACGTCAAT",7,1.04,NA,NA,NA,NA,NA,NA,"stop","F156M T170S Y175* P197E",4
"lib1","SARS-CoV-2","TACTACAAATAATAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","Y123* P169W",2
"lib1","SARS-CoV-2","TACTACAAGCGTAAAA",1,10.33,7.46,-3.3,0.27,1.88,1.06,0.02,">1 nonsynonymous","N13T Y119F V181C",3
"lib1","SARS-CoV-2","TACTACAATGTACTAT",2,24.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3V P7S R27C L38R Q84W E141I Y175I",7
"lib1","SARS-CoV-2","TACTACAATGTTCTCA",3,32.26,7.75,-3.01,0.44,1.5,1,0.08,">1 nonsynonymous","S19M D97T D112W",3
"lib1","SARS-CoV-2","TACTACAGAATTAGTA",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TACTACAGATAAACGT",10,64.24,10.53,-0.23,0.05,2.92,1.01,0,">1 nonsynonymous","C61S D90M",2
"lib1","SARS-CoV-2","TACTACAGCTACAGTA",4,58.83,10.04,-0.73,0.05,2.1,1.06,0,"1 nonsynonymous","L38Q",1
"lib1","SARS-CoV-2","TACTACAGTCACATAG",4,35.56,9.17,-1.6,0.12,2.35,1.14,0.01,">1 nonsynonymous","C6S N13G G116H T201I",4
"lib1","SARS-CoV-2","TACTACATAATATGTA",2,42.13,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V11R W23A T100R",3
"lib1","SARS-CoV-2","TACTACATGCTCACTC",2,17.83,8.54,-2.23,0.19,2.68,1.17,0.01,">1 nonsynonymous","T46F Y119L N130H",3
"lib1","SARS-CoV-2","TACTACATTACAACTT",6,50.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4M V20G N58F L122Q E135L",5
"lib1","SARS-CoV-2","TACTACCACCCTCAAC",4,36.62,6.29,-4.47,0.43,1.5,1.15,0.01,"1 nonsynonymous","C158V",1
"lib1","SARS-CoV-2","TACTACCACGTATCAC",8,45.29,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N40P L60H S113F Q168R Y178R V182F",6
"lib1","SARS-CoV-2","TACTACCAGGCAAAGA",3,67.11,10.76,-0.01,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTACCATTGCCATT",1,43.22,10.6,-0.17,0.04,2.92,1,0,">1 nonsynonymous","G9M D97G",2
"lib1","SARS-CoV-2","TACTACCCATTAAAGT",5,12.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W106D Q168L",2
"lib1","SARS-CoV-2","TACTACCCCTTCGTCA",1,35.39,10.66,-0.1,0.05,2.89,1.02,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","TACTACCGCCAAATTG",1,13.35,6.09,-4.67,0.58,3,1.11,0.01,">1 nonsynonymous","I2L W106M G117I V181G",4
"lib1","SARS-CoV-2","TACTACCGCCAAGGTG",3,14.72,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","A89N L122E V180S",3
"lib1","SARS-CoV-2","TACTACCTAACTTCGA",2,56.39,10.67,-0.1,0.09,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTACCTCAACACAA",2,29.68,9.37,-1.39,0.24,1.63,1.1,0.03,">1 nonsynonymous","P96H T100C L122I",3
"lib1","SARS-CoV-2","TACTACCTCACCTTAA",2,35.7,6.32,-4.44,0.63,1.5,1.18,0.02,">1 nonsynonymous","A67H P169A",2
"lib1","SARS-CoV-2","TACTACCTCGCGGTAT",3,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81E I104G G155V P191T",4
"lib1","SARS-CoV-2","TACTACCTCTACGGCA",1,10.33,9.81,-0.96,0.21,2.36,1.08,0.01,">1 nonsynonymous","D90R E154W",2
"lib1","SARS-CoV-2","TACTACCTTCTTTAAT",9,132.55,10.54,-0.23,0.04,2.9,1.03,0,">1 nonsynonymous","S129L N151H",2
"lib1","SARS-CoV-2","TACTACGAAAATAAAA",1,7.48,10.6,-0.16,0.11,2.92,1.04,0,">1 nonsynonymous","K128G T201A",2
"lib1","SARS-CoV-2","TACTACGACAAAAGCA",1,16.74,8.87,-1.89,0.09,2.59,1.01,0,">1 nonsynonymous","F8L N120T S129Y G174R",4
"lib1","SARS-CoV-2","TACTACGCCCAAATTT",6,108.38,10.74,-0.03,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTACGGAAACAATA",1,8.03,6,-4.76,1.39,3,1.08,0,">1 nonsynonymous","F99I N107L Y123T E141D",4
"lib1","SARS-CoV-2","TACTACGGATTTGATC",1,0.52,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib1","SARS-CoV-2","TACTACGGCATATCTT",2,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95N V103H G174M",3
"lib1","SARS-CoV-2","TACTACTAATACGTTT",3,82.37,8.42,-2.35,0.28,1.5,1.15,0.03,">1 nonsynonymous","C102F N110H N118T N130C",4
"lib1","SARS-CoV-2","TACTACTCATGGACAA",3,45.79,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10M P96S Y123S G152F N157Y Q176S V182M",7
"lib1","SARS-CoV-2","TACTACTCTAATCACT",6,169.8,10.74,-0.03,0.06,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTACTGTCCGAACG",5,89.89,9.02,-1.74,0.08,2.71,1.17,0,">1 nonsynonymous","Y121L G166L S200L",3
"lib1","SARS-CoV-2","TACTAGAAAAATGAAA",2,0.4,NA,NA,NA,NA,NA,NA,"stop","L111T N118* D137V",3
"lib1","SARS-CoV-2","TACTAGAAAGCGAAAT",7,233.47,9.52,-1.24,0.05,2.83,1.08,0,"1 nonsynonymous","A145F",1
"lib1","SARS-CoV-2","TACTAGAATGGGAACC",1,6.38,8.88,-1.89,0.2,2.62,1.34,0.01,">1 nonsynonymous","Y119S K128F G166A",3
"lib1","SARS-CoV-2","TACTAGACCTACGAAA",11,59.97,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","A22F L95R Y119T G155S",4
"lib1","SARS-CoV-2","TACTAGATGTTTAGCG",6,18.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10H C31Y A89L N130Y E141A K199V",6
"lib1","SARS-CoV-2","TACTAGATTTGATCAT",3,17.5,10.96,0.19,0.11,2.96,1,0,">1 nonsynonymous","D97K S129V",2
"lib1","SARS-CoV-2","TACTAGCACCTCTATA",4,83.27,10.83,0.06,0.1,2.91,1.06,0,">1 nonsynonymous","V37F K128S",2
"lib1","SARS-CoV-2","TACTAGCAGTGAATTT",6,101.47,10.89,0.12,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAGCCACACAGTG",8,106.86,10.2,-0.56,0.05,2.79,1.02,0,"1 nonsynonymous","Y123I",1
"lib1","SARS-CoV-2","TACTAGCCCTATTATT",3,44.08,6,-4.76,2,3,1.11,0,">1 nonsynonymous","G86R A105V P133K",3
"lib1","SARS-CoV-2","TACTAGCTCGGCCATC",6,0.82,NA,NA,NA,NA,NA,NA,"stop","F8A Y93L S129* E141Y",4
"lib1","SARS-CoV-2","TACTAGCTCGTGCTAT",8,211.46,10,-0.77,0.06,2.81,1.04,0,">1 nonsynonymous","A33Q K87V S139F",3
"lib1","SARS-CoV-2","TACTAGCTGCAAACGG",4,24.38,8.29,-2.47,0.18,2.34,1.08,0.01,">1 nonsynonymous","K128G I142D",2
"lib1","SARS-CoV-2","TACTAGCTTTTCTGTA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","S45I K48* E76*",3
"lib1","SARS-CoV-2","TACTAGGAAAAGGTAC",5,123.66,10.85,0.09,0.07,2.93,1.03,0,"1 nonsynonymous","I2D",1
"lib1","SARS-CoV-2","TACTAGGAAGGTTTAG",1,11.46,10.58,-0.18,0.09,2.85,1.06,0.01,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","TACTAGGACTATCAAT",4,26.25,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","G9R F47Y N107C T170L V182G",5
"lib1","SARS-CoV-2","TACTAGGAGGTCTAAG",9,5.03,NA,NA,NA,NA,NA,NA,"stop","N13S C61* K132T",3
"lib1","SARS-CoV-2","TACTAGGATAACTCAA",3,9.42,6,-4.76,1.68,1.5,1.06,0.01,">1 nonsynonymous","D34L L60V L95I N107I K128F Q144K",6
"lib1","SARS-CoV-2","TACTAGGGATGAGGAC",2,34.76,6.89,-3.88,0.41,1.5,1.13,0.03,">1 nonsynonymous","L38M A89H N120T P177L",4
"lib1","SARS-CoV-2","TACTAGGGTTAGTTAT",2,48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55G C61N P82Y A89Y S113I G152Q",6
"lib1","SARS-CoV-2","TACTAGTAAACGCCAA",4,41.63,10.7,-0.06,0.06,2.92,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTAGTAATGATGTT",3,76.98,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G83Y I88P D98E F134Y",4
"lib1","SARS-CoV-2","TACTAGTAATGGCCAA",7,30.08,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","T3I S19V",2
"lib1","SARS-CoV-2","TACTAGTACCCACCAA",3,33.69,10.75,-0.01,0.07,2.84,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTAGTACTCGATTT",3,10.88,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I72E A81R N92L",3
"lib1","SARS-CoV-2","TACTAGTCAAAAGGAA",12,117.49,10.76,0,0.08,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTAGTCCCTTGGCG",1,36.51,10.74,-0.02,0.09,2.81,1.05,0,">1 nonsynonymous","L5H T100N",2
"lib1","SARS-CoV-2","TACTAGTCTGACTGTA",2,13.53,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","A89V G101M N107V P133R T148P",5
"lib1","SARS-CoV-2","TACTAGTGAGTTGAAC",1,41.47,9.67,-1.1,0.11,1.94,1.03,0.01,"1 nonsynonymous","R25K",1
"lib1","SARS-CoV-2","TACTAGTTTAAAATAC",5,14.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S45N C61V N118G Q144L F185L",5
"lib1","SARS-CoV-2","TACTATAAAGGTACCT",9,40.8,6,-4.76,2,3,1.23,0,">1 nonsynonymous","F12N C61Y F70H N171R",4
"lib1","SARS-CoV-2","TACTATAACCTCGCAT",5,15.73,9.79,-0.97,0.18,1.98,1.08,0.02,">1 nonsynonymous","G9T S53F S184D",3
"lib1","SARS-CoV-2","TACTATAACCTTTCGT",2,18.44,10.51,-0.26,0.12,2.91,1.1,0.01,">1 nonsynonymous","Y119R G166T H189R",3
"lib1","SARS-CoV-2","TACTATAAGAAAAAAG",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y T55I A81Y D98S P149I",5
"lib1","SARS-CoV-2","TACTATAAGTTAACGT",5,214.91,10.72,-0.04,0.05,2.88,1.08,0,"1 nonsynonymous","K128N",1
"lib1","SARS-CoV-2","TACTATACACAACTTA",2,18.41,9.1,-1.66,0.09,2.86,1.1,0.01,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","TACTATACATACTCGC",4,47.28,6.32,-4.45,0.71,1.5,1.21,0.02,">1 nonsynonymous","T85R G172D",2
"lib1","SARS-CoV-2","TACTATAGCCGTAACT",1,16.04,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C150A Q176K S184F",3
"lib1","SARS-CoV-2","TACTATATACAAACAA",1,28.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S129Y C150S F156K",3
"lib1","SARS-CoV-2","TACTATATCCGAGCCT",1,9.51,6,-4.76,2,2.57,1.13,0,">1 nonsynonymous","C49D Y66Q P96L D112Y",4
"lib1","SARS-CoV-2","TACTATATGCCTGATT",1,54,10.79,0.03,0.06,2.95,1.02,0,">1 nonsynonymous","T55F R136K P197V",3
"lib1","SARS-CoV-2","TACTATATTATATTAA",3,11.52,10.41,-0.35,0.13,2.92,1.02,0.01,"1 nonsynonymous","L57V",1
"lib1","SARS-CoV-2","TACTATCACTCACCGG",1,19.48,6,-4.76,2,3,1.06,0,">1 nonsynonymous","N58S Y91E T100G C158E",4
"lib1","SARS-CoV-2","TACTATCAGCAGTCAC",1,9.84,10.24,-0.52,0.11,1.87,1.01,0,">1 nonsynonymous","N13A L57N",2
"lib1","SARS-CoV-2","TACTATCGCAGGCTAA",4,1.78,NA,NA,NA,NA,NA,NA,"stop","S36R D90* P96I",3
"lib1","SARS-CoV-2","TACTATCTAAGATTAA",2,33.11,10.75,-0.02,0.11,2.81,1.15,0,"1 nonsynonymous","F62I",1
"lib1","SARS-CoV-2","TACTATCTCAATCGGG",1,15.38,10.58,-0.18,0.09,2.95,1.01,0.01,">1 nonsynonymous","N1V E141S",2
"lib1","SARS-CoV-2","TACTATCTCGTTTTTT",6,7.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L N13V A42R N58Y D59Y V182M",6
"lib1","SARS-CoV-2","TACTATGAATTTCGAG",5,1.79,NA,NA,NA,NA,NA,NA,"stop","A42S V77L T100K W106* Y165C V181*",6
"lib1","SARS-CoV-2","TACTATGAGGGCCGAA",1,1.95,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TACTATGAGTATTTTA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","S36* I88*",2
"lib1","SARS-CoV-2","TACTATGATATATGAT",9,64.55,10.73,-0.04,0.04,2.93,1.03,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","TACTATGATATCCTGA",6,97.12,10.65,-0.11,0.04,2.92,1.03,0,">1 nonsynonymous","S36L T63S I142L",3
"lib1","SARS-CoV-2","TACTATGATTGAAAGT",1,28.89,10.19,-0.57,0.1,2.8,1,0.01,">1 nonsynonymous","V37G F44S",2
"lib1","SARS-CoV-2","TACTATGCGTAATCAA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","L57* Q84S G174A",3
"lib1","SARS-CoV-2","TACTATGGCTTATTTT",5,24.92,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V20E Y35H F62V Y93S N107R P149I",6
"lib1","SARS-CoV-2","TACTATGTACAGTCCC",2,1,NA,NA,NA,NA,NA,NA,"stop","S29M A42K F70L Q84* F99S",5
"lib1","SARS-CoV-2","TACTATGTCCCCTAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L T15P S45H L131E",4
"lib1","SARS-CoV-2","TACTATGTGATGATAG",10,106.87,6.33,-4.44,0.21,1.99,1.12,0,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","TACTATGTTATCACGT",4,73.24,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6V D90H S113T",3
"lib1","SARS-CoV-2","TACTATGTTGTAAACT",6,50.12,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N4M F44S T85L D90L I104Y L122I G174K T201L",8
"lib1","SARS-CoV-2","TACTATTAAACATACA",3,7.73,NA,NA,NA,NA,NA,NA,"stop","E10R S43M D98F S139T Q176V K199*",6
"lib1","SARS-CoV-2","TACTATTACAATCGAT",4,20.83,6,-4.76,1.87,3,1.08,0,">1 nonsynonymous","V32P T46P P96D",3
"lib1","SARS-CoV-2","TACTATTATAAATCTC",2,36.41,10.2,-0.56,0.06,2.94,1.03,0,">1 nonsynonymous","L5R I28L G155C",3
"lib1","SARS-CoV-2","TACTATTCACAATGAG",3,7.86,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N4F L57S G116L C158F",4
"lib1","SARS-CoV-2","TACTATTCTAACCTAG",10,170.24,10.72,-0.05,0.05,2.85,1.07,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","TACTATTGAATCCTGA",1,31.2,10.58,-0.18,0.07,2.9,1.06,0,">1 nonsynonymous","N4F P54L",2
"lib1","SARS-CoV-2","TACTATTGACAAGAAC",4,6.48,9.31,-1.45,0.15,2.74,1.24,0.01,">1 nonsynonymous","G117V K128T",2
"lib1","SARS-CoV-2","TACTATTGATTGGAGG",1,17.49,9.17,-1.6,0.19,2.05,1.15,0.02,">1 nonsynonymous","N13F G152V",2
"lib1","SARS-CoV-2","TACTATTTAATACACA",1,6.47,7.61,-3.15,0.63,1.5,1.16,0.04,">1 nonsynonymous","T15P D34T F62E P133S S184Y P197S",6
"lib1","SARS-CoV-2","TACTATTTAGTTCGAG",2,63,6,-4.76,2,2.21,1.1,0,">1 nonsynonymous","V32L R124E P133S",3
"lib1","SARS-CoV-2","TACTATTTATTATGCT",6,36.6,10.68,-0.08,0.04,2.92,1.04,0,">1 nonsynonymous","G152N V173A",2
"lib1","SARS-CoV-2","TACTCAAAACGCCAAC",2,20.8,6,-4.76,2,3,1.15,0,">1 nonsynonymous","R25I T100P N130V",3
"lib1","SARS-CoV-2","TACTCAAAAGTGACTA",4,34.64,8.54,-2.23,0.39,1.5,1,0.06,">1 nonsynonymous","I2L V20M",2
"lib1","SARS-CoV-2","TACTCAACAGATGAGT",4,76.51,10.18,-0.58,0.1,2.51,1.07,0,">1 nonsynonymous","S41R N107S",2
"lib1","SARS-CoV-2","TACTCAAGACAGTTGT",5,100.58,10.32,-0.45,0.07,2.9,1,0,">1 nonsynonymous","A14K Y66T I138D",3
"lib1","SARS-CoV-2","TACTCAAGTAACTCTT",1,27.5,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6E C49Q N64I D75K G146R Y165N",6
"lib1","SARS-CoV-2","TACTCAATCCCCATTG",4,19.54,7.02,-3.75,0.54,1.66,1.11,0.07,">1 nonsynonymous","L95E Y119T S139H",3
"lib1","SARS-CoV-2","TACTCACAAGCTTACT",1,9.11,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L5V S36L D90N G155V P161Q F167S",6
"lib1","SARS-CoV-2","TACTCACACGCCAAAA",9,37.25,6.15,-4.61,0.65,1.5,1.11,0.02,">1 nonsynonymous","Y143V V182S",2
"lib1","SARS-CoV-2","TACTCACAGACATTAG",1,43.6,10.65,-0.12,0.07,2.9,1.06,0,">1 nonsynonymous","R27T Q163K",2
"lib1","SARS-CoV-2","TACTCACAGGCGATCC",3,59.3,10.23,-0.53,0.1,2.78,1.05,0,">1 nonsynonymous","N4H D59I",2
"lib1","SARS-CoV-2","TACTCACCCATTACCT",9,32.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41P L57S A89M",3
"lib1","SARS-CoV-2","TACTCACCCTTTACAT",1,32.19,7.23,-3.53,0.2,1.5,1.14,0.01,">1 nonsynonymous","G9E A14S W23S G83R D90N L122S",6
"lib1","SARS-CoV-2","TACTCACCGCAATAAT",1,57.36,10.78,0.01,0.09,2.97,1,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","TACTCACCTTCAACAG",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87P E141N L183R",3
"lib1","SARS-CoV-2","TACTCACGAAGACTGG",1,5.49,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","V65K V103M Y119R C158F",4
"lib1","SARS-CoV-2","TACTCACGAATTATAC",6,51.41,6.95,-3.82,0.23,1.56,1.18,0.01,">1 nonsynonymous","N107P S113M G116E",3
"lib1","SARS-CoV-2","TACTCACTGGCCATCA",2,33.21,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I80L C158P",2
"lib1","SARS-CoV-2","TACTCAGAAGATTACG",2,66.02,9.27,-1.5,0.06,2.86,1.07,0,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","TACTCAGCTTTAACCG",11,0.92,NA,NA,NA,NA,NA,NA,"stop","P7F R179*",2
"lib1","SARS-CoV-2","TACTCAGTAAGCGCTT",6,98.62,10.7,-0.07,0.06,2.92,1.01,0,">1 nonsynonymous","N64K V153A",2
"lib1","SARS-CoV-2","TACTCAGTCATTCTAG",8,64.37,8.89,-1.88,0.12,2.02,1.17,0.01,">1 nonsynonymous","F44M S129P Q144T",3
"lib1","SARS-CoV-2","TACTCAGTGTGCACTT",4,81.91,10.68,-0.08,0.04,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTCATAACAACAAT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","S69E C102* V182L",3
"lib1","SARS-CoV-2","TACTCATAACATCCAC",5,63.45,8.32,-2.44,0.17,2.11,1.07,0.01,">1 nonsynonymous","T15M Y66F Y159L",3
"lib1","SARS-CoV-2","TACTCATATAGTCTAC",1,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C N13F A42K F47V I80V",5
"lib1","SARS-CoV-2","TACTCATCCGACCTTG",4,15.85,8.73,-2.03,0.33,1.5,1.2,0.04,">1 nonsynonymous","A14V Q84H G116P P149Q",4
"lib1","SARS-CoV-2","TACTCATGAAAGACTT",4,186.38,10.75,-0.01,0.05,2.92,1.05,0,"1 nonsynonymous","T46S",1
"lib1","SARS-CoV-2","TACTCATTCGTCCTTA",3,24.33,7.97,-2.8,0.42,1.5,1.03,0.06,"1 nonsynonymous","A105E",1
"lib1","SARS-CoV-2","TACTCATTTAGAACAC",2,16.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P7A S69R N110F Y119L T148S S184C",6
"lib1","SARS-CoV-2","TACTCCAACGAAAGAG",1,10.34,9.85,-0.92,0.38,2.17,1,0.05,">1 nonsynonymous","E135R N151Q F156S",3
"lib1","SARS-CoV-2","TACTCCAATAGAAAGT",3,50.31,10.27,-0.49,0.05,2.79,1,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","TACTCCACTTAAAATC",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64D G152I C158G Q176P E186Y",5
"lib1","SARS-CoV-2","TACTCCATACGTAAAA",4,72.5,10.63,-0.13,0.06,2.88,1.08,0,"1 nonsynonymous","V115Y",1
"lib1","SARS-CoV-2","TACTCCATCAAGTTCT",7,106.2,6.25,-4.52,0.28,1.5,1.14,0,">1 nonsynonymous","P54L D90G F167E K198Y",4
"lib1","SARS-CoV-2","TACTCCATTACGTTTG",1,68.83,9.05,-1.71,0.11,1.95,1.08,0,">1 nonsynonymous","F44E V115E P133Y",3
"lib1","SARS-CoV-2","TACTCCATTGGAAACA",2,24.21,10.49,-0.27,0.07,2.88,1,0,">1 nonsynonymous","C61W N120L F160Y",3
"lib1","SARS-CoV-2","TACTCCATTTAACGAC",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V E154N V180E",3
"lib1","SARS-CoV-2","TACTCCCCCACTTCCC",4,37.21,10.85,0.08,0.11,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTCCCGACTAGTAG",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F C49F C61P K114H R127D P161I Y165I",7
"lib1","SARS-CoV-2","TACTCCCGATACAACG",4,54.73,9.81,-0.95,0.1,2.41,1.04,0,"1 nonsynonymous","V181L",1
"lib1","SARS-CoV-2","TACTCCCGGGCCGTTA",3,76.04,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L5F Y21R F126L Q176S",4
"lib1","SARS-CoV-2","TACTCCGAACCGAGTT",1,68.43,8.4,-2.36,0.17,2.24,1.09,0.01,">1 nonsynonymous","S43L T63N S113P",3
"lib1","SARS-CoV-2","TACTCCGACATCAGGC",1,0.98,NA,NA,NA,NA,NA,NA,"stop","L5K F12V Y39W Y50K V77*",5
"lib1","SARS-CoV-2","TACTCCGAGGCTAGTG",5,111.81,10.73,-0.04,0.05,2.94,1.02,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TACTCCGCGATACCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44G K132*",2
"lib1","SARS-CoV-2","TACTCCGCTGACCTAC",7,169.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L G74I",2
"lib1","SARS-CoV-2","TACTCCGTCCACAGAA",2,68.22,10.34,-0.43,0.04,2.85,1.04,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TACTCCGTGACTAGTA",2,18.65,8.26,-2.51,0.41,1.5,1.05,0.05,">1 nonsynonymous","V11Y D112V",2
"lib1","SARS-CoV-2","TACTCCTCCCAACGAA",3,31.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2A R124C E141A",3
"lib1","SARS-CoV-2","TACTCCTCCCAGAAGC",6,54.04,6.27,-4.49,0.67,1.5,1.19,0.03,">1 nonsynonymous","G9T F99H K128L T193P",4
"lib1","SARS-CoV-2","TACTCCTGACCCCGCT",2,52.41,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23Q L38H T63A D90I P96R G166F T201L",7
"lib1","SARS-CoV-2","TACTCCTGTCGATTCT",1,5.56,7.36,-3.41,0.38,1.5,1.29,0.05,">1 nonsynonymous","T15L Y35P Y123I E141Q",4
"lib1","SARS-CoV-2","TACTCCTTTTTGGCAG",1,6.8,10.42,-0.35,0.26,2.22,1,0.01,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","TACTCGAACTAAAGCG",19,142.22,7.79,-2.97,0.13,1.5,1.11,0,">1 nonsynonymous","L38V Y121P K128L",3
"lib1","SARS-CoV-2","TACTCGAAGTCGCACC",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Y L60P D98G",3
"lib1","SARS-CoV-2","TACTCGAAGTGGTCAA",1,1.04,NA,NA,NA,NA,NA,NA,"stop","D90M N120* A190S",3
"lib1","SARS-CoV-2","TACTCGAATAATCGAA",1,14.85,7.51,-3.25,0.31,1.5,1.14,0.03,">1 nonsynonymous","I28K D90K N130T",3
"lib1","SARS-CoV-2","TACTCGAATGAATTTG",2,39.1,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y35V I88H",2
"lib1","SARS-CoV-2","TACTCGAATTAGATAT",1,7.18,6.12,-4.64,0.39,3,1.12,0,">1 nonsynonymous","T100I R179L",2
"lib1","SARS-CoV-2","TACTCGACAACGGATC",7,113.13,9.74,-1.03,0.08,2.55,1.07,0,">1 nonsynonymous","T15H F44P F156I",3
"lib1","SARS-CoV-2","TACTCGACAATCACGT",2,27.41,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I2G F8L S36L A89R G174F",5
"lib1","SARS-CoV-2","TACTCGACAGACACCA",3,110.51,9.92,-0.84,0.09,2.17,1.03,0,">1 nonsynonymous","F8N A33W",2
"lib1","SARS-CoV-2","TACTCGACGCATGATG",3,0,NA,NA,NA,NA,NA,NA,"stop","C6S R78* G83R C158S",4
"lib1","SARS-CoV-2","TACTCGACTAAAGATT",3,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A L60I I72H A105G Q144W P149R",6
"lib1","SARS-CoV-2","TACTCGAGCCTGAATG",1,8.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A F70L D97F",3
"lib1","SARS-CoV-2","TACTCGATATCCATAT",7,34.58,9.84,-0.92,0.11,2.09,1.1,0.01,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","TACTCGCCAATGACGT",3,0,NA,NA,NA,NA,NA,NA,"stop","K87* A105C Y121A G174Y L187I",5
"lib1","SARS-CoV-2","TACTCGCCTGTACCGC",5,27.26,6,-4.76,2,1.5,1.21,0.05,"1 nonsynonymous","F99D",1
"lib1","SARS-CoV-2","TACTCGCTAAGAATAG",11,267.07,9.44,-1.33,0.23,1.5,1,0.02,">1 nonsynonymous","A14R R127K T148F V173S",4
"lib1","SARS-CoV-2","TACTCGCTTACACCAT",2,23.79,10.62,-0.14,0.1,2.9,1.07,0,">1 nonsynonymous","L5R P54M",2
"lib1","SARS-CoV-2","TACTCGTGAAAAATAT",2,0.14,NA,NA,NA,NA,NA,NA,"stop","G51M P96* V103Y K114S Y119E K132L",6
"lib1","SARS-CoV-2","TACTCGTTACAAACGT",1,10.09,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","S45L F134P P149D",3
"lib1","SARS-CoV-2","TACTCTAAAATCAGCT",3,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138R N151G",2
"lib1","SARS-CoV-2","TACTCTAAACTTCCCA",1,62.46,10.79,0.02,0.05,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTCTAAGGTTAATG",5,67.9,10.87,0.1,0.08,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTCTAATTAGACAC",3,24.07,6,-4.76,2,3,1.23,0.01,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","TACTCTACAGTTATTT",6,81.28,10.5,-0.26,0.06,2.94,1.02,0,">1 nonsynonymous","T15A V32E",2
"lib1","SARS-CoV-2","TACTCTACCGAATCCA",10,122.2,6,-4.76,0.79,1.5,1.12,0.01,">1 nonsynonymous","S19T V52L T85G K87E N110P V180I P197S",7
"lib1","SARS-CoV-2","TACTCTACGGAGGTTT",5,119.46,10.79,0.03,0.08,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTCTAGGCAACATC",1,18.57,6,-4.76,1.01,1.5,1.08,0.01,"1 nonsynonymous","F167E",1
"lib1","SARS-CoV-2","TACTCTAGGCCAGACT",2,42.54,6.78,-3.99,0.4,1.5,1.12,0.02,">1 nonsynonymous","D90A Y143S P149Q",3
"lib1","SARS-CoV-2","TACTCTCACAGGACAA",7,105.33,6,-4.76,0.96,1.5,1.14,0,">1 nonsynonymous","E141I C158S V173L L183I",4
"lib1","SARS-CoV-2","TACTCTCAGAAAAATC",2,0.64,NA,NA,NA,NA,NA,NA,"stop","I2* A42L A89C V115N",4
"lib1","SARS-CoV-2","TACTCTCATTTATTCC",12,63.73,9.71,-1.05,0.19,1.69,1.12,0.01,">1 nonsynonymous","K87R F99L Y123L N171H T201I",5
"lib1","SARS-CoV-2","TACTCTCCTTTGATAG",1,13.69,9.5,-1.27,0.3,2,1.09,0.06,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","TACTCTCTAATGTCAG",7,112.16,10.24,-0.53,0.05,2.93,1.03,0,">1 nonsynonymous","T140V G155E",2
"lib1","SARS-CoV-2","TACTCTGAAGCGTAGG",1,30.2,10.12,-0.64,0.12,2.65,1,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","TACTCTGAATAGATCA",6,29.66,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","N4L F12N V37N T55M A67N",5
"lib1","SARS-CoV-2","TACTCTTACGAATAAT",3,14.04,6.07,-4.69,1.07,1.5,1.23,0.04,">1 nonsynonymous","S41G R78H A89R G152S",4
"lib1","SARS-CoV-2","TACTCTTATAATATGC",8,71.68,9.03,-1.73,0.16,1.66,1.15,0.01,">1 nonsynonymous","A14S D137H",2
"lib1","SARS-CoV-2","TACTCTTCACTAAAAA",8,49.87,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","G51D R78Q K87T D98Y Y119S F134D",6
"lib1","SARS-CoV-2","TACTCTTCTTAAACTA",1,18.79,8.42,-2.34,0.13,1.76,1.1,0.01,">1 nonsynonymous","V11A Q168L",2
"lib1","SARS-CoV-2","TACTCTTGATAATGAA",8,10.43,NA,NA,NA,NA,NA,NA,"stop","W23R K94* Q168P",3
"lib1","SARS-CoV-2","TACTCTTGCCTTCCAG",2,9.92,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19Y Y91S K114Y R124H L131Q",5
"lib1","SARS-CoV-2","TACTGAAAAACAAAAA",5,79.1,10.24,-0.53,0.04,2.86,1.03,0,">1 nonsynonymous","P54Y Q84T P169Y",3
"lib1","SARS-CoV-2","TACTGAAAAATAGGCA",10,88.03,6.04,-4.73,0.62,1.5,1.14,0.01,"1 nonsynonymous","R124V",1
"lib1","SARS-CoV-2","TACTGAAAAATCGTCT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","T55Y F70* P82C",3
"lib1","SARS-CoV-2","TACTGAAAAGAACTAA",7,173.58,10.82,0.05,0.08,2.91,1.04,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","TACTGAAAATAAGAAG",5,43.75,8.93,-1.83,0.35,1.5,1.15,0.05,">1 nonsynonymous","V11T F44D E135S L187Q",4
"lib1","SARS-CoV-2","TACTGAAAATGTTCAC",3,67.39,6.43,-4.34,0.34,1.5,1.14,0.01,">1 nonsynonymous","F62D Y119A F126Y F156V",4
"lib1","SARS-CoV-2","TACTGAAATTGCCATT",8,164.63,10.78,0.02,0.07,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTGAACATCGTTCG",2,58.46,8.48,-2.28,0.13,1.85,1.11,0.01,">1 nonsynonymous","F44M S113V",2
"lib1","SARS-CoV-2","TACTGAACCAGGCTAA",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y D97T A145F F156S",4
"lib1","SARS-CoV-2","TACTGAATATGATGGT",4,63.3,10.31,-0.45,0.05,2.89,1.01,0,">1 nonsynonymous","G9K I138G",2
"lib1","SARS-CoV-2","TACTGAATATTTATTG",2,0.69,NA,NA,NA,NA,NA,NA,"stop","P7* F12D K56T Y121F",4
"lib1","SARS-CoV-2","TACTGAATTGCGAATG",5,34.79,6.08,-4.68,0.97,1.5,1.22,0.02,">1 nonsynonymous","G9D G101H",2
"lib1","SARS-CoV-2","TACTGACAAAACTGTT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","R16* L95S G146V N157F",4
"lib1","SARS-CoV-2","TACTGACAAGCAAAGG",1,11.16,6.89,-3.87,0.4,1.5,1.15,0.02,">1 nonsynonymous","C61L P96I",2
"lib1","SARS-CoV-2","TACTGACACCCGCTAG",2,3.16,NA,NA,NA,NA,NA,NA,"stop","G9L L60Q F99* Y143N V173G",5
"lib1","SARS-CoV-2","TACTGACATTAATTAG",5,81.45,10.66,-0.1,0.06,2.94,1.03,0,">1 nonsynonymous","Y21V F134Y",2
"lib1","SARS-CoV-2","TACTGACCTAAATAGC",2,9.84,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","E10Q D34L G51L C61M",4
"lib1","SARS-CoV-2","TACTGACGCACATATT",3,33.91,9.45,-1.31,0.14,1.76,1.18,0.01,">1 nonsynonymous","F8Y V37E D98F S164L",4
"lib1","SARS-CoV-2","TACTGACGGGTATTAT",2,17.91,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","R27Y S36R V115H C150R E154D S184Q",6
"lib1","SARS-CoV-2","TACTGACGTTAGGGAT",1,6.35,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F17L F70L Y119F V180S",4
"lib1","SARS-CoV-2","TACTGACGTTGAGAGG",2,32.75,8.25,-2.51,0.32,1.5,1.12,0.04,">1 nonsynonymous","F44E T85N R136T",3
"lib1","SARS-CoV-2","TACTGACTAAACAGTT",2,61.31,10.64,-0.12,0.05,2.92,1.05,0,"1 nonsynonymous","A145G",1
"lib1","SARS-CoV-2","TACTGACTATTCGTGC",3,29.11,7.41,-3.36,0.37,1.5,1.01,0.04,">1 nonsynonymous","F8K R16T D98I F167R",4
"lib1","SARS-CoV-2","TACTGAGAAACTGAAT",3,38.98,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C6F N58I N92D I104C",4
"lib1","SARS-CoV-2","TACTGAGAATTAGAAT",1,32.46,10.59,-0.18,0.11,2.71,1.25,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TACTGAGGATTATGAA",6,123.87,10.79,0.02,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTGAGGTCAACAAT",9,64.69,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D90Q R136L L162D",3
"lib1","SARS-CoV-2","TACTGAGTGCTACAAG",2,22.51,8.07,-2.69,0.28,1.77,1.12,0.02,">1 nonsynonymous","D34N C61P S113R",3
"lib1","SARS-CoV-2","TACTGAGTGTGCTTAC",4,37.69,8.78,-1.98,0.11,2.02,1.23,0.01,">1 nonsynonymous","V11H K87L I138P",3
"lib1","SARS-CoV-2","TACTGATAATACTATC",2,33.24,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","F44L R73V F99H Y123G",4
"lib1","SARS-CoV-2","TACTGATCACACTCCA",3,3.55,NA,NA,NA,NA,NA,NA,"stop","I88Y P96*",2
"lib1","SARS-CoV-2","TACTGATCTTACACGT",11,174.84,10.48,-0.29,0.04,2.89,1.03,0,">1 nonsynonymous","N40R Q84K T140D",3
"lib1","SARS-CoV-2","TACTGATGACCGCTGA",7,58.85,7.26,-3.51,0.12,1.5,1.08,0,">1 nonsynonymous","C6Y S53R D59R T170L",4
"lib1","SARS-CoV-2","TACTGCAAACATCGAT",2,39.95,10.54,-0.23,0.06,2.85,1.12,0,">1 nonsynonymous","D59T T201P",2
"lib1","SARS-CoV-2","TACTGCAAATGTAATA",1,65.83,9.15,-1.61,0.09,2.7,1.17,0,">1 nonsynonymous","N4I S113T",2
"lib1","SARS-CoV-2","TACTGCAAGGGACGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88E T140Q G174R",3
"lib1","SARS-CoV-2","TACTGCAATGGGCATA",2,25.25,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V77Q Y91N K94E C102R L122S",5
"lib1","SARS-CoV-2","TACTGCACAACAAATA",1,76.88,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","V65A F156L P177T L187V",4
"lib1","SARS-CoV-2","TACTGCACTACCACAT",15,184.95,10.71,-0.05,0.04,2.88,1.08,0,"1 nonsynonymous","C61Q",1
"lib1","SARS-CoV-2","TACTGCACTTCACCGA",5,2.46,NA,NA,NA,NA,NA,NA,"stop","R27L Y35* Y50M N64T F126S P133I F156S L188A P191G",9
"lib1","SARS-CoV-2","TACTGCAGTTACGAGA",4,46.56,9.81,-0.95,0.1,2.02,1.04,0,">1 nonsynonymous","T15G A42R P96S K128V",4
"lib1","SARS-CoV-2","TACTGCATAAAGAGAA",6,81.85,6,-4.76,1.86,1.5,1.17,0.01,">1 nonsynonymous","A22H S69E T100P",3
"lib1","SARS-CoV-2","TACTGCATAACTACCA",1,10.64,9.6,-1.16,0.21,2.41,1.13,0.02,">1 nonsynonymous","N4Y F12L D90N S129L T140S",5
"lib1","SARS-CoV-2","TACTGCCAGTGCTCGT",4,19.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5I A81M R124S",3
"lib1","SARS-CoV-2","TACTGCCCAAAGTATG",11,727.15,9.97,-0.79,0.06,2.89,1.02,0,"1 nonsynonymous","R73S",1
"lib1","SARS-CoV-2","TACTGCCCTAGTTAAC",1,79.71,9.85,-0.92,0.11,2.35,1.05,0,">1 nonsynonymous","K114E R127G",2
"lib1","SARS-CoV-2","TACTGCCCTATTGATT",4,18.52,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K94T N107V",2
"lib1","SARS-CoV-2","TACTGCCTTAATGGGT",1,8.75,9.56,-1.21,0.32,1.76,1.46,0.04,">1 nonsynonymous","W106K E154L",2
"lib1","SARS-CoV-2","TACTGCGAAAGGCAAC",13,173.31,10.64,-0.12,0.04,2.9,1.05,0,">1 nonsynonymous","L122R A145I",2
"lib1","SARS-CoV-2","TACTGCGGGAAATCAC",1,14.64,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Q79R L95R",2
"lib1","SARS-CoV-2","TACTGCGTACAATAGA",2,54.09,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S36L C49N A145S P149T V173C G196L",6
"lib1","SARS-CoV-2","TACTGCTGTTAACATG",7,0.71,NA,NA,NA,NA,NA,NA,"stop","G51F L95R Y119*",3
"lib1","SARS-CoV-2","TACTGCTTCACGGAAT",6,75,8.27,-2.49,0.14,1.84,1.15,0.01,">1 nonsynonymous","F44S S45P I142N",3
"lib1","SARS-CoV-2","TACTGGACCAATTTAA",2,12.74,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A105M L162K",2
"lib1","SARS-CoV-2","TACTGGACCTCGTACC",7,98.54,9.65,-1.11,0.05,2.76,1.05,0,">1 nonsynonymous","N4S G9E I142S",3
"lib1","SARS-CoV-2","TACTGGAGCCTACTTG",1,39.5,9.25,-1.52,0.07,2.72,1.15,0,">1 nonsynonymous","D59V L125P T148S",3
"lib1","SARS-CoV-2","TACTGGCACAAGTTAA",14,136.96,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N1I F44K F47L Y178R",4
"lib1","SARS-CoV-2","TACTGGCCAACGCCAA",4,49.95,10.72,-0.04,0.06,2.93,1.01,0,">1 nonsynonymous","V37T L60N",2
"lib1","SARS-CoV-2","TACTGGCGCGGCTGAA",1,15.6,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G83P K132S",2
"lib1","SARS-CoV-2","TACTGGCTAACGACTA",3,35.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40I K48R D90L G117K Y143G P191N",6
"lib1","SARS-CoV-2","TACTGGGGAGCAGTGC",6,40.46,10.47,-0.3,0.06,2.88,1.03,0,">1 nonsynonymous","D98R S129I T201S",3
"lib1","SARS-CoV-2","TACTGGGGCCCTGCAT",8,47.69,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","D68T D137R S184L",3
"lib1","SARS-CoV-2","TACTGGGTTTTTCCCG",1,8.28,8.21,-2.56,0.38,1.5,1,0.04,">1 nonsynonymous","D98V F99L L125T F156T",4
"lib1","SARS-CoV-2","TACTGGTCTATCAATA",6,155.86,10.27,-0.5,0.04,2.87,1.01,0,">1 nonsynonymous","D59M K128S G146A T201S",4
"lib1","SARS-CoV-2","TACTGGTTAGGACTTG",7,147.83,10.77,0,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTGTAAAAAATACC",4,107.3,10.77,0.01,0.1,2.92,1.06,0,">1 nonsynonymous","T46H I104F",2
"lib1","SARS-CoV-2","TACTGTAACGGTTTAA",3,34.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TACTGTACAACTCCGT",5,126.51,8.84,-1.93,0.12,1.96,1.1,0.01,">1 nonsynonymous","K87M Y91K D98W S129T G155A",5
"lib1","SARS-CoV-2","TACTGTACCACCATAG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","T85H N92M L131*",3
"lib1","SARS-CoV-2","TACTGTACTATAACAT",3,51.1,9.96,-0.8,0.06,2.56,1,0,">1 nonsynonymous","L5N K48F C195S",3
"lib1","SARS-CoV-2","TACTGTATAATAAAGA",5,38.79,9.46,-1.31,0.15,2.12,1.1,0.01,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","TACTGTATCCGCGAAA",1,25.73,10.89,0.13,0.08,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTGTATGGCTTACC",5,23.3,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C61S G172V",2
"lib1","SARS-CoV-2","TACTGTCAAACCTTCG",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N W106N P197D",3
"lib1","SARS-CoV-2","TACTGTCAGGACCTTA",3,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83R L125Q",2
"lib1","SARS-CoV-2","TACTGTCGATATCACA",4,44.96,9.29,-1.48,0.07,2.84,1.12,0,">1 nonsynonymous","Y39T Q168I",2
"lib1","SARS-CoV-2","TACTGTCGTAGCTGCC",4,43.21,10.8,0.03,0.11,2.78,1.12,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","TACTGTCTATGTCAAT",1,44.9,10.4,-0.36,0.08,2.89,1.04,0,">1 nonsynonymous","D97N E154Q A190I",3
"lib1","SARS-CoV-2","TACTGTCTGTAAGTTA",1,15.73,9.77,-0.99,0.12,2.73,1.11,0.01,">1 nonsynonymous","N24S F44I Y119R",3
"lib1","SARS-CoV-2","TACTGTGAAATCTTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q C150E",2
"lib1","SARS-CoV-2","TACTGTGAACAACAAT",6,108.06,10.11,-0.65,0.05,2.76,1.02,0,">1 nonsynonymous","E10V A190C K199I",3
"lib1","SARS-CoV-2","TACTGTGAAGAAGTAA",7,3.83,NA,NA,NA,NA,NA,NA,"stop","D68C A81I A105*",3
"lib1","SARS-CoV-2","TACTGTGACTGTGAAA",9,213.48,10.24,-0.53,0.04,2.95,1.02,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","TACTGTGATTAAGGCG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84A S147P G166S A190F",4
"lib1","SARS-CoV-2","TACTGTGCGAATTAAT",7,180.8,9.29,-1.48,0.07,2.76,1.14,0,">1 nonsynonymous","G117K T201N",2
"lib1","SARS-CoV-2","TACTGTGCTAACACAA",12,116.92,10.79,0.02,0.07,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTGTGGACCAAATC",2,40.86,7.57,-3.2,0.15,1.5,1.05,0.01,"1 nonsynonymous","C150H",1
"lib1","SARS-CoV-2","TACTGTGTAAAGACAC",6,50.17,6.24,-4.52,0.48,1.5,1.15,0.01,">1 nonsynonymous","I28M V103F",2
"lib1","SARS-CoV-2","TACTGTTACTAGTGAA",3,63.14,8.75,-2.02,0.14,2.09,1.17,0.01,">1 nonsynonymous","G116I G155L",2
"lib1","SARS-CoV-2","TACTGTTATGCTCAAA",5,85.11,10.7,-0.06,0.09,2.87,1.08,0,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","TACTGTTTACAAGTGA",1,2.34,NA,NA,NA,NA,NA,NA,"stop","A14F D34* V77K A81D I142S",5
"lib1","SARS-CoV-2","TACTGTTTGGATACCA",4,106.93,9.6,-1.17,0.04,2.9,1.07,0,">1 nonsynonymous","N64S Y119S",2
"lib1","SARS-CoV-2","TACTTAAAAGGTTACC",14,2.27,NA,NA,NA,NA,NA,NA,"stop","C61Q G74* K114L",3
"lib1","SARS-CoV-2","TACTTAAACCCCAAAT",1,16.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N64Y G101I K114R G174V",4
"lib1","SARS-CoV-2","TACTTAAAGATGTTGA",2,38.17,8.52,-2.24,0.18,2.43,1.22,0.02,">1 nonsynonymous","T3D F44S F126T",3
"lib1","SARS-CoV-2","TACTTAACAAATACAT",1,25.67,10.18,-0.58,0.11,2.21,1.01,0.01,">1 nonsynonymous","V11S N110K",2
"lib1","SARS-CoV-2","TACTTAACAATTATAC",6,126.67,9.7,-1.07,0.08,2.56,1.05,0,">1 nonsynonymous","L131V Y143M",2
"lib1","SARS-CoV-2","TACTTAACAGAACCGC",8,295.15,10.64,-0.12,0.05,2.86,1.06,0,">1 nonsynonymous","N64T N110P",2
"lib1","SARS-CoV-2","TACTTAACGTTGCGGA",4,54.88,6,-4.76,1.41,1.5,1.21,0.02,">1 nonsynonymous","I28C D98A C150V Y178V",4
"lib1","SARS-CoV-2","TACTTAACTAGTTTAT",5,46.04,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N64C G152D P161L",3
"lib1","SARS-CoV-2","TACTTAACTTTTATGT",3,82.38,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","P177E",1
"lib1","SARS-CoV-2","TACTTAAGAATAAAGA",4,13.51,6.22,-4.55,0.84,1.5,1.22,0.04,">1 nonsynonymous","T63D R179I",2
"lib1","SARS-CoV-2","TACTTAAGCATACACG",5,73.82,10.72,-0.04,0.04,2.95,1.03,0,">1 nonsynonymous","T55S K199N",2
"lib1","SARS-CoV-2","TACTTAATACTACGAT",4,2.02,NA,NA,NA,NA,NA,NA,"stop","C6* G174E",2
"lib1","SARS-CoV-2","TACTTAATGTCTTTGT",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150Y N157R L183G",3
"lib1","SARS-CoV-2","TACTTAATTACCAGGC",3,69.36,10.55,-0.22,0.09,2.91,1.08,0,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","TACTTACCAATCTATG",1,10.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93L D112H P133T",3
"lib1","SARS-CoV-2","TACTTACCCAAAAGTA",7,34.6,7.04,-3.73,0.49,1.5,1.13,0.06,">1 nonsynonymous","A89T S113F V182G",3
"lib1","SARS-CoV-2","TACTTACCTATCTTAT",7,126.83,8.63,-2.13,0.07,2.91,1.06,0,"1 nonsynonymous","N171R",1
"lib1","SARS-CoV-2","TACTTACGCACCTTCA",8,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T K48L C102A",3
"lib1","SARS-CoV-2","TACTTACGTTAGGAAC",4,34.8,10.24,-0.52,0.08,2.84,1.05,0,">1 nonsynonymous","G9C N130L F160H",3
"lib1","SARS-CoV-2","TACTTACTACAAGACA",1,3.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92S",1
"lib1","SARS-CoV-2","TACTTACTCTCCGCTA",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49E K56F T100K",3
"lib1","SARS-CoV-2","TACTTACTTAACCTCG",6,78.8,9.46,-1.3,0.1,2.26,1.09,0,">1 nonsynonymous","S43R Y121E",2
"lib1","SARS-CoV-2","TACTTAGAAAATTTTC",4,24.84,6.12,-4.64,1.44,1.5,1.24,0.05,"1 nonsynonymous","I104R",1
"lib1","SARS-CoV-2","TACTTAGACCTGAGCT",3,71.37,10.58,-0.19,0.06,2.88,1.09,0,">1 nonsynonymous","N64L L111I",2
"lib1","SARS-CoV-2","TACTTAGACGATATAT",15,2.74,NA,NA,NA,NA,NA,NA,"stop","D137* N171F",2
"lib1","SARS-CoV-2","TACTTAGACGCAATCA",9,160.31,10.72,-0.04,0.04,2.95,1.01,0,"1 nonsynonymous","S43C",1
"lib1","SARS-CoV-2","TACTTAGAGCTTCTTG",7,15.62,9.86,-0.91,0.13,2.03,1.03,0.01,"1 nonsynonymous","N92A",1
"lib1","SARS-CoV-2","TACTTAGATGATCCAA",3,38.26,9.91,-0.85,0.11,2.54,1.03,0.01,">1 nonsynonymous","A18L K128S",2
"lib1","SARS-CoV-2","TACTTAGATTAGGGAG",1,3.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198M",1
"lib1","SARS-CoV-2","TACTTAGCTGAGTAGA",3,106.19,10.1,-0.67,0.05,2.97,1,0,">1 nonsynonymous","F126V T193K",2
"lib1","SARS-CoV-2","TACTTAGGAAATAGGC",1,7.34,7.14,-3.62,0.49,1.5,1.13,0.08,">1 nonsynonymous","C102Q Y121D",2
"lib1","SARS-CoV-2","TACTTAGTCCGCATTA",4,137.64,10.58,-0.18,0.07,2.78,1.08,0,">1 nonsynonymous","S41T A192V",2
"lib1","SARS-CoV-2","TACTTAGTGCAATTGG",2,17.5,6.49,-4.28,0.75,1.5,1.21,0.07,">1 nonsynonymous","G9M D112H",2
"lib1","SARS-CoV-2","TACTTAGTGGATACAT",2,28.94,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C49T D59P G83N",3
"lib1","SARS-CoV-2","TACTTAGTTCACGCGA",4,106.42,8.56,-2.2,0.11,2.69,1.09,0,">1 nonsynonymous","S43K P149I G155T G166C T201Y",5
"lib1","SARS-CoV-2","TACTTAGTTTGAGCTT",4,78.36,10.74,-0.03,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTTATAAATAAAAA",2,84.38,10.68,-0.08,0.06,2.91,1.03,0,"1 nonsynonymous","S45N",1
"lib1","SARS-CoV-2","TACTTATCAGATTACA",7,75.85,9.84,-0.92,0.13,2.05,1.1,0.01,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","TACTTATCCCACACCA",5,42.95,6,-4.76,1.96,1.5,1.19,0.03,">1 nonsynonymous","D68V T170R",2
"lib1","SARS-CoV-2","TACTTATCCGGGACAG",10,126.87,10.78,0.01,0.05,2.91,1.05,0,"1 nonsynonymous","K198T",1
"lib1","SARS-CoV-2","TACTTATCCTACAAAT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","G51N V65G F99* Y119F E186N A190G",6
"lib1","SARS-CoV-2","TACTTATCGAATTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V20R A33I C61L D68R Y91K P133*",6
"lib1","SARS-CoV-2","TACTTATCTATGACAA",5,21.06,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","L60I Y119F N157V",3
"lib1","SARS-CoV-2","TACTTATGAACGCAAT",7,31.88,10.78,0.02,0.05,2.93,1.03,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","TACTTATGCTCAAAAG",3,43.68,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","P82N P96R S113K P161M",4
"lib1","SARS-CoV-2","TACTTATTAGTGGAAT",4,2.5,NA,NA,NA,NA,NA,NA,"stop","C6L V37R E141*",3
"lib1","SARS-CoV-2","TACTTCAAATTTAGCA",1,96.15,8.82,-1.94,0.12,1.59,1.21,0.01,"1 nonsynonymous","V77W",1
"lib1","SARS-CoV-2","TACTTCAAGAATATTA",17,178.24,6,-4.76,1.2,1.5,1.15,0,">1 nonsynonymous","T55L G86P N107M",3
"lib1","SARS-CoV-2","TACTTCACATAATTAT",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C K26L A42Y D112T G152H G166D",6
"lib1","SARS-CoV-2","TACTTCACATGGCATA",9,113.91,9.81,-0.95,0.12,2.11,1.06,0.01,">1 nonsynonymous","S41K D90V",2
"lib1","SARS-CoV-2","TACTTCACTAGCAAAC",2,16.72,9.82,-0.94,0.21,2.02,1.24,0.02,">1 nonsynonymous","S36W D59G S139M",3
"lib1","SARS-CoV-2","TACTTCATCACACAAG",1,15.62,10.64,-0.12,0.07,2.82,1.14,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","TACTTCATCCTACCCA",3,36.32,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","R16C Y93G N107H",3
"lib1","SARS-CoV-2","TACTTCATGGCCTTAA",1,33.05,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","T3L A14G P54L G74E N107G Y178A",6
"lib1","SARS-CoV-2","TACTTCATTATGGTAA",3,17.19,7.51,-3.25,0.29,1.5,1.03,0.03,">1 nonsynonymous","V11R N92S",2
"lib1","SARS-CoV-2","TACTTCCACTCCTTTC",4,0.48,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","TACTTCCATTACGAGA",4,64.12,8.79,-1.97,0.1,2.28,1.06,0,">1 nonsynonymous","I2V T85D D90H Y143V",4
"lib1","SARS-CoV-2","TACTTCCGACGCATTA",3,0.64,NA,NA,NA,NA,NA,NA,"stop","T3E F44N N58* D98S E141I V181* K199*",7
"lib1","SARS-CoV-2","TACTTCCGACTTCTGA",5,0.62,NA,NA,NA,NA,NA,NA,"stop","C31S S45A D68* E135Y S200L",5
"lib1","SARS-CoV-2","TACTTCCGCACCCACT",5,54.34,6,-4.76,2,1.5,1.15,0.02,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","TACTTCCTGACCAACG",2,16.79,10.74,-0.03,0.09,3,1,0,">1 nonsynonymous","T3R Y35V",2
"lib1","SARS-CoV-2","TACTTCCTGCTATCTT",4,33.95,6.1,-4.67,0.67,1.5,1.14,0.01,">1 nonsynonymous","C6P D68R D98I S129L",4
"lib1","SARS-CoV-2","TACTTCGATAAATTCA",1,91.08,10.76,0,0.04,2.94,1.02,0,">1 nonsynonymous","Y39F V115S",2
"lib1","SARS-CoV-2","TACTTCGGAGTCATAT",4,0.78,NA,NA,NA,NA,NA,NA,"stop","V65* L122P C158N",3
"lib1","SARS-CoV-2","TACTTCGTTTCCATAA",1,11.04,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","Y35V T55P P96R T170D L187M",5
"lib1","SARS-CoV-2","TACTTCTAGACGCATG",2,25.09,8.71,-2.05,0.1,1.73,1.08,0.01,">1 nonsynonymous","L38R G155E",2
"lib1","SARS-CoV-2","TACTTCTATAACAAAT",5,84.39,9.62,-1.15,0.13,2.09,1.13,0.01,">1 nonsynonymous","A14Q D97G Q144K P149W",4
"lib1","SARS-CoV-2","TACTTCTTAGTTAAGG",9,169.88,10.26,-0.51,0.04,2.81,1.01,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","TACTTCTTTAAAATAA",5,57.28,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44W W106L V153P P177M",4
"lib1","SARS-CoV-2","TACTTCTTTTGCGGAT",2,12.62,10.43,-0.34,0.13,2.9,1.08,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","TACTTGAAAATGCACA",15,99.92,6,-4.76,2,3,1.18,0,">1 nonsynonymous","T3C V20Y Y165T",3
"lib1","SARS-CoV-2","TACTTGAAGCTTATAT",4,48.38,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","V77N Y91M G166T",3
"lib1","SARS-CoV-2","TACTTGAATATTCGAG",4,60.7,9.95,-0.81,0.12,2.5,1.09,0.01,">1 nonsynonymous","L60A A105W F160A",3
"lib1","SARS-CoV-2","TACTTGACACTTCAGC",5,36.33,9.52,-1.25,0.13,2.63,1.04,0.01,">1 nonsynonymous","G152C S164A P169Y T201Y",4
"lib1","SARS-CoV-2","TACTTGACATTTAAGC",9,88.73,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P7A V37H A89M R124N S147L V153C S184L",7
"lib1","SARS-CoV-2","TACTTGACGCACAAGG",7,2.88,NA,NA,NA,NA,NA,NA,"stop","C6S Y39* S45I Y50S D98V E141Y V181I",7
"lib1","SARS-CoV-2","TACTTGAGAAACATCA",5,57.81,10,-0.77,0.08,2.83,1.05,0,">1 nonsynonymous","N58L Q168N",2
"lib1","SARS-CoV-2","TACTTGAGTAAGGTCC",1,25.12,9.93,-0.84,0.31,1.52,1.03,0.04,">1 nonsynonymous","Y35H V52G V115E",3
"lib1","SARS-CoV-2","TACTTGATCACCTTAA",1,10.84,10.88,0.12,0.28,2.25,1,0.03,">1 nonsynonymous","P82R G83V Y119S",3
"lib1","SARS-CoV-2","TACTTGATTAGCTCCA",4,74.55,10.81,0.05,0.07,2.94,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTTGCAAGTGTGCC",8,118.51,10.17,-0.59,0.06,2.83,1,0,">1 nonsynonymous","A14E T55S D90C L122S",4
"lib1","SARS-CoV-2","TACTTGCCGCTCGGGG",2,17.23,11.02,0.25,0.13,2.88,1.04,0,"1 nonsynonymous","Y178H",1
"lib1","SARS-CoV-2","TACTTGCGAAATAATC",3,41.63,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","P96R N107P G146K V194I",4
"lib1","SARS-CoV-2","TACTTGCTGCATACTA",10,1.69,NA,NA,NA,NA,NA,NA,"stop","V77F G86* D98R",3
"lib1","SARS-CoV-2","TACTTGGAAAAAAAAA",4,1.64,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","TACTTGGAAGCCCTAA",5,32.85,10.08,-0.69,0.1,2.66,1.06,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","TACTTGGCATCAGACT",10,109.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37N Y91G N107I",3
"lib1","SARS-CoV-2","TACTTGGCCCTAATTC",2,16.01,10.46,-0.31,0.06,2.97,1,0,">1 nonsynonymous","V52Y C61E",2
"lib1","SARS-CoV-2","TACTTGGCTGTTCCAA",1,33.05,6.93,-3.83,0.24,1.5,1.14,0.01,">1 nonsynonymous","Y35R E76S N107P",3
"lib1","SARS-CoV-2","TACTTGGTTAACCTGA",9,64.99,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","C6V V37I Q84K A105G G172K",5
"lib1","SARS-CoV-2","TACTTGTAGACGATGT",8,70.21,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C31H C49H",2
"lib1","SARS-CoV-2","TACTTGTGAGAACAGT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","S19L A89*",2
"lib1","SARS-CoV-2","TACTTTAAAAGGTGAG",3,93.23,10.58,-0.19,0.04,2.93,1.02,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TACTTTAAATACTGTT",5,68.3,10.78,0.02,0.06,2.9,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TACTTTAACTTGCTCA",3,78.4,10.6,-0.16,0.05,2.93,1.03,0,"1 nonsynonymous","V173A",1
"lib1","SARS-CoV-2","TACTTTAAGACCTCAG",4,25.64,9.36,-1.41,0.1,2.93,1.08,0,">1 nonsynonymous","A42P Q84M Y119G",3
"lib1","SARS-CoV-2","TACTTTACAATGATCT",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F V37G D97I C150I",4
"lib1","SARS-CoV-2","TACTTTACAGTGTTTG",10,198.96,10.76,-0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTTTACCCAACAAT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","E76T F99*",2
"lib1","SARS-CoV-2","TACTTTACTATTTATT",4,8.89,10.37,-0.4,0.26,2.84,1,0.02,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","TACTTTAGAGTATTAA",2,9,8.15,-2.61,0.25,1.57,1.25,0.03,">1 nonsynonymous","V37Y S43T D68G E141V G152I",5
"lib1","SARS-CoV-2","TACTTTATAATGAACC",7,35.7,10.74,-0.03,0.06,2.88,1.05,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","TACTTTATCCTTAAGT",9,2.48,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib1","SARS-CoV-2","TACTTTCAAAGAATAT",5,102.18,10.81,0.05,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTTTCACATAAAGA",3,46.13,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","D137I P161C",2
"lib1","SARS-CoV-2","TACTTTCATTCTATTT",7,48.89,6.88,-3.89,0.53,1.5,1.17,0.04,">1 nonsynonymous","I2D S53K A67P",3
"lib1","SARS-CoV-2","TACTTTCCACAGACAA",4,10.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L D34G D90N F99S K128V T148R",6
"lib1","SARS-CoV-2","TACTTTCCAGAAACAA",2,158.35,10.72,-0.04,0.04,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TACTTTCCATTCAAAG",3,53.54,10.25,-0.51,0.04,2.89,1.08,0,">1 nonsynonymous","N58F K198T",2
"lib1","SARS-CoV-2","TACTTTCCTAATTATC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* C61M P82T L122G",4
"lib1","SARS-CoV-2","TACTTTCTAAAGTCCC",3,35.14,6.23,-4.53,0.83,1.5,1.22,0.03,">1 nonsynonymous","T63C I104K S147I",3
"lib1","SARS-CoV-2","TACTTTCTAATGGAAA",3,32.74,10.74,-0.02,0.11,2.9,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACTTTCTGACTTTTA",1,14.9,10.71,-0.06,0.15,2.92,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TACTTTCTTATACCAG",8,76.85,6.41,-4.36,0.46,1.5,1.17,0.02,">1 nonsynonymous","I72M D90N Y91M F134N",4
"lib1","SARS-CoV-2","TACTTTGACATATAAA",5,38.5,6,-4.76,2,1.5,1.32,0.07,"1 nonsynonymous","F167C",1
"lib1","SARS-CoV-2","TACTTTGATCTCCACG",5,178.57,8.76,-2.01,0.08,2.43,1.12,0,">1 nonsynonymous","S41W G146C",2
"lib1","SARS-CoV-2","TACTTTGCAACTGGAA",3,54.34,10.62,-0.15,0.06,2.89,1.08,0,">1 nonsynonymous","I104V N151S",2
"lib1","SARS-CoV-2","TACTTTGCTGCGCGCT",3,94.26,10.61,-0.15,0.03,2.9,1.05,0,">1 nonsynonymous","G9Q C61P",2
"lib1","SARS-CoV-2","TACTTTGTAGCACGAA",2,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T S41F C61Y D68N",4
"lib1","SARS-CoV-2","TACTTTGTTGACATAA",3,8.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6W R25S E76D",3
"lib1","SARS-CoV-2","TACTTTGTTGATCAAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","I88E F167*",2
"lib1","SARS-CoV-2","TACTTTTAAATAAATG",1,1.28,NA,NA,NA,NA,NA,NA,"stop","V115Q R127*",2
"lib1","SARS-CoV-2","TACTTTTACCAAACTA",3,41.73,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V20L D59G A89F P149E",4
"lib1","SARS-CoV-2","TACTTTTCTTTTAATC",5,123.6,9.68,-1.09,0.08,2.69,1.05,0,">1 nonsynonymous","S41M N64G Q84L S129D F156P",5
"lib1","SARS-CoV-2","TACTTTTGTATACTAT",2,13.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5R A42D D59W S108P R136W Q168C P197S",7
"lib1","SARS-CoV-2","TACTTTTTAATTGCTC",3,46.51,10.7,-0.06,0.05,2.92,1.02,0,">1 nonsynonymous","Y35L V65I D98P V173N",4
"lib1","SARS-CoV-2","TACTTTTTACGAAAAA",7,72.6,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9V S69K D97N W106G R124I",5
"lib1","SARS-CoV-2","TACTTTTTACGTATGG",3,22.89,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","S36G N64W G146R P177Y H189F",5
"lib1","SARS-CoV-2","TAGAAAAAAAATAACA",5,48.44,7.05,-3.71,0.38,1.5,1.06,0.03,">1 nonsynonymous","S45M N118R V180S",3
"lib1","SARS-CoV-2","TAGAAAAAAAATCATA",2,65.34,8.26,-2.51,0.13,1.76,1.14,0.01,">1 nonsynonymous","F12K G174L",2
"lib1","SARS-CoV-2","TAGAAAAAAATAAACG",3,19.77,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","P82V P161V",2
"lib1","SARS-CoV-2","TAGAAAAAAATCCATT",1,26.09,10.56,-0.2,0.08,2.78,1.15,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","TAGAAAAAAGGTATCG",3,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L V37S D68A P82W L122F Y165T E186L T201S",8
"lib1","SARS-CoV-2","TAGAAAAAATCAATAA",5,67.29,9.79,-0.98,0.13,2.23,1.07,0.01,">1 nonsynonymous","C6S T15F N130Q T148A",4
"lib1","SARS-CoV-2","TAGAAAAACATACTCG",3,24.89,10.61,-0.16,0.12,2.77,1.15,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TAGAAAAACCCACACA",3,30.04,10.72,-0.04,0.1,2.76,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAAAAAGAACTATG",2,53.18,8.54,-2.23,0.16,2.75,1.06,0.01,">1 nonsynonymous","L60S V115C F156S",3
"lib1","SARS-CoV-2","TAGAAAAAGCATCCCT",2,26.76,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N1T I28T F99Y G146E",4
"lib1","SARS-CoV-2","TAGAAAAAGTAGGGTG",7,20.51,9.27,-1.5,0.18,1.74,1.22,0.02,">1 nonsynonymous","V11G K132S",2
"lib1","SARS-CoV-2","TAGAAAAATAGGGGCA",15,267.85,9.51,-1.25,0.15,1.92,1.12,0.01,">1 nonsynonymous","F44C C61R N120I T140M",4
"lib1","SARS-CoV-2","TAGAAAAATCAAAGGC",13,96.25,9.2,-1.57,0.12,1.75,1.09,0.01,">1 nonsynonymous","A14L T55L G83N N130G V153F",5
"lib1","SARS-CoV-2","TAGAAAAATTGGCGAC",2,5.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R I88F Y119T",3
"lib1","SARS-CoV-2","TAGAAAACAAAATACT",4,73.25,10.77,0,0.07,2.89,1.06,0,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","TAGAAAACCAGACTTA",1,9.86,9.13,-1.64,0.28,2.08,1.11,0.04,">1 nonsynonymous","D75L I138Y E154A",3
"lib1","SARS-CoV-2","TAGAAAACTCAATATA",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P Y143V F185K P197G",4
"lib1","SARS-CoV-2","TAGAAAACTGTCTTAA",7,81.43,10.77,0.01,0.08,2.9,1.05,0,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","TAGAAAAGAATTAAAC",5,55.75,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G83P P96R Y123R V181F S200M",5
"lib1","SARS-CoV-2","TAGAAAAGACAACCGG",1,51.23,9.12,-1.65,0.08,2.93,1.07,0,">1 nonsynonymous","Y119L A190N T201Y",3
"lib1","SARS-CoV-2","TAGAAAAGACACCATA",4,29.82,10.61,-0.15,0.09,2.88,1.01,0,">1 nonsynonymous","K48I G152S",2
"lib1","SARS-CoV-2","TAGAAAAGCCTTCCCG",2,76.68,9.77,-1,0.09,2.07,1.07,0,">1 nonsynonymous","C6P A18S S53L",3
"lib1","SARS-CoV-2","TAGAAAAGCTAAATCC",1,6.9,9.65,-1.12,0.24,2.76,1,0.03,">1 nonsynonymous","S53A K87D",2
"lib1","SARS-CoV-2","TAGAAAAGGGAAAACA",4,48.07,9.99,-0.77,0.09,2.71,1.04,0,">1 nonsynonymous","N1A S43F N118M S129K",4
"lib1","SARS-CoV-2","TAGAAAAGGGAATAAA",3,68.98,10.58,-0.18,0.08,2.92,1.02,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","TAGAAAATAAGAGAAC",1,28.18,10.8,0.03,0.08,2.93,1.03,0,">1 nonsynonymous","Y39K C61K",2
"lib1","SARS-CoV-2","TAGAAAATAGATATCT",2,39.12,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G86P G166V",2
"lib1","SARS-CoV-2","TAGAAAATATTATGGA",2,31.74,9.98,-0.79,0.1,2.18,1.06,0,">1 nonsynonymous","T15S W106L",2
"lib1","SARS-CoV-2","TAGAAAATCATAGTCC",1,51.53,7.18,-3.58,0.29,1.61,1.17,0.02,"1 nonsynonymous","C150V",1
"lib1","SARS-CoV-2","TAGAAAATGCCACATA",5,66.92,10.65,-0.11,0.07,2.85,1.1,0,">1 nonsynonymous","T55L G83H",2
"lib1","SARS-CoV-2","TAGAAAATTAAATACT",4,86.76,10.75,-0.02,0.08,2.9,1.06,0,">1 nonsynonymous","L5R V173M",2
"lib1","SARS-CoV-2","TAGAAACAACCTGAAG",1,5.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25G N107F F126V G166V",4
"lib1","SARS-CoV-2","TAGAAACAACGAAGGA",1,5.39,9.88,-0.89,0.22,2.62,1.12,0.02,"1 nonsynonymous","C102M",1
"lib1","SARS-CoV-2","TAGAAACAAGGATGCA",7,49.13,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","A81L F99W S113K N151K",4
"lib1","SARS-CoV-2","TAGAAACACCTTTTAG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","A18* S43L D68V W106V T148L",5
"lib1","SARS-CoV-2","TAGAAACACTATAGCA",4,6.33,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1E D97R S139V V173T",4
"lib1","SARS-CoV-2","TAGAAACAGATTTTAA",6,19.3,6,-4.76,1.38,1.5,1.13,0.02,">1 nonsynonymous","A89K D98L K132W C158N",4
"lib1","SARS-CoV-2","TAGAAACATACTTGAC",2,0.81,NA,NA,NA,NA,NA,NA,"stop","R16D Y35N S41T V52Y R73A Y91*",6
"lib1","SARS-CoV-2","TAGAAACATAGGCAAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","Y21T N40* D59K W106L R127T Q176L",6
"lib1","SARS-CoV-2","TAGAAACATGACTTAT",9,343.58,8.86,-1.9,0.06,2.79,1.1,0,">1 nonsynonymous","A14R Y143V",2
"lib1","SARS-CoV-2","TAGAAACCATAAATGA",10,210.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10L C61K G101Y Y159S",4
"lib1","SARS-CoV-2","TAGAAACCCAACTTAA",5,0.58,NA,NA,NA,NA,NA,NA,"stop","V32M I88* G155C",3
"lib1","SARS-CoV-2","TAGAAACCCCTTAACC",1,37.66,10.85,0.09,0.06,2.88,1.06,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","TAGAAACCCCTTTAAT",1,16.05,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","S43P P54V N92F T170S",4
"lib1","SARS-CoV-2","TAGAAACCCTTCATAA",4,4.34,NA,NA,NA,NA,NA,NA,"stop","A22N V37*",2
"lib1","SARS-CoV-2","TAGAAACCGTCGCTAA",1,9.2,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9K V71R R179V",3
"lib1","SARS-CoV-2","TAGAAACCTCTTAAAA",3,37.67,10.47,-0.29,0.06,2.83,1.07,0,">1 nonsynonymous","A33M K56F P149S",3
"lib1","SARS-CoV-2","TAGAAACCTTTCCCCC",3,54.48,10.68,-0.09,0.05,2.89,1.08,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","TAGAAAGAAAAGATGT",3,55.85,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V11F R73F N107V L162N",4
"lib1","SARS-CoV-2","TAGAAAGACTGACCCT",7,104.59,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D90W F167R S200V",3
"lib1","SARS-CoV-2","TAGAAAGAGAGACAAG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","TAGAAAGAGGATAAAT",2,19.21,10.87,0.1,0.24,2.91,1,0.01,"1 nonsynonymous","A192E",1
"lib1","SARS-CoV-2","TAGAAAGATAATAGGC",5,92.9,8.58,-2.18,0.12,2.9,1.06,0.01,"1 nonsynonymous","Y175Q",1
"lib1","SARS-CoV-2","TAGAAAGATCACCAAT",3,20.91,8.81,-1.95,0.21,2,1.27,0.02,">1 nonsynonymous","Y123W G174V",2
"lib1","SARS-CoV-2","TAGAAAGCAGGTGCGT",1,6.63,6.06,-4.7,1.39,1.5,1.01,0.06,">1 nonsynonymous","S41L L95T K114P",3
"lib1","SARS-CoV-2","TAGAAAGCATCGCAAA",3,37.35,10.6,-0.16,0.05,2.9,1.06,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TAGAAAGGAACTGACA",5,50.46,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V37Y I80L A89T Q176K",4
"lib1","SARS-CoV-2","TAGAAAGGAACTGATC",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I K128I",2
"lib1","SARS-CoV-2","TAGAAAGGATTAGTCT",2,40.48,9.69,-1.07,0.15,2.36,1.07,0.01,"1 nonsynonymous","D34L",1
"lib1","SARS-CoV-2","TAGAAAGGGAACAATC",5,79.47,10.57,-0.19,0.07,2.79,1.04,0,">1 nonsynonymous","V37C T148N",2
"lib1","SARS-CoV-2","TAGAAAGTAAAATAGT",3,0.44,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib1","SARS-CoV-2","TAGAAAGTCATATTCT",6,10.82,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L5I V11R S41I V77R D98M",5
"lib1","SARS-CoV-2","TAGAAAGTTCTCACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F47V L57* N107S I142G",4
"lib1","SARS-CoV-2","TAGAAATAAAATAAAA",5,20.12,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F156C V182R",2
"lib1","SARS-CoV-2","TAGAAATACCACTTCT",2,25.23,10.82,0.05,0.07,2.9,1.06,0,">1 nonsynonymous","Y35F A42Q",2
"lib1","SARS-CoV-2","TAGAAATACCGTTCAG",2,22.58,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G155N G172S",2
"lib1","SARS-CoV-2","TAGAAATAGAGGTAAA",5,33.93,7.74,-3.02,0.32,1.5,1.09,0.04,">1 nonsynonymous","A22D A105D G174V",3
"lib1","SARS-CoV-2","TAGAAATAGATAAAAT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","V11* V77E P96N",3
"lib1","SARS-CoV-2","TAGAAATAGTCACCTG",9,41.34,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","F8Q A105R G166F S184G",4
"lib1","SARS-CoV-2","TAGAAATCAGATCAAA",1,15.36,10.8,0.03,0.13,2.88,1.02,0.01,">1 nonsynonymous","L38I N130A",2
"lib1","SARS-CoV-2","TAGAAATCTACTAGAC",10,76.41,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F62L I72D R136H",3
"lib1","SARS-CoV-2","TAGAAATGGAGCCGAG",3,6.26,11.16,0.4,0.1,3,1.01,0,"1 nonsynonymous","L162I",1
"lib1","SARS-CoV-2","TAGAAATTCAAATAAT",1,7.9,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C49D F167K",2
"lib1","SARS-CoV-2","TAGAAATTCAGACCTA",4,75.01,7.96,-2.8,0.23,1.5,1.1,0.02,">1 nonsynonymous","G86S G166T",2
"lib1","SARS-CoV-2","TAGAAATTCATATGTT",4,7.53,10.91,0.15,0.13,2.85,1.12,0.01,"1 nonsynonymous","V32R",1
"lib1","SARS-CoV-2","TAGAAATTCCTAGCTT",6,11.1,6.45,-4.31,1.14,1.5,1.1,0.02,">1 nonsynonymous","L131T G146L",2
"lib1","SARS-CoV-2","TAGAAATTCGAACAGA",4,89.87,9.75,-1.01,0.11,2.16,1.09,0,">1 nonsynonymous","P7L S43C T85M",3
"lib1","SARS-CoV-2","TAGAAATTGCCACCTA",4,83.3,10.59,-0.17,0.03,2.93,1.02,0,">1 nonsynonymous","L122F L162M",2
"lib1","SARS-CoV-2","TAGAAATTTGTGCTTC",3,86.54,9.02,-1.74,0.08,2.69,1.11,0,">1 nonsynonymous","A42L Q168L V173I",3
"lib1","SARS-CoV-2","TAGAACAAAACACGGT",10,103.68,6.68,-4.08,0.37,1.5,1.24,0.02,">1 nonsynonymous","F12R S41G K48A",3
"lib1","SARS-CoV-2","TAGAACAACGATGCGA",3,131.1,9.79,-0.97,0.06,2.96,1.04,0,"1 nonsynonymous","T170Y",1
"lib1","SARS-CoV-2","TAGAACAATACGTACT",2,132.99,10.77,0.01,0.05,2.93,1.03,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","TAGAACACATTAAATT",2,33.85,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","E10V D90I A105Q F156D",4
"lib1","SARS-CoV-2","TAGAACACCCTACACC",3,71.78,10.77,0.01,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAACACCCTCTACG",6,28.7,8.24,-2.52,0.18,2.07,1.13,0.01,">1 nonsynonymous","K87D A105M S200F",3
"lib1","SARS-CoV-2","TAGAACACCTCGGTAT",4,36.95,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A14L Y121L K128I T170F",4
"lib1","SARS-CoV-2","TAGAACAGATAAACGT",2,1.45,NA,NA,NA,NA,NA,NA,"stop","G51V S69K I88M W106* T140G G155R",6
"lib1","SARS-CoV-2","TAGAACAGATAGAATC",4,9.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V103G K128C I142P G146W",4
"lib1","SARS-CoV-2","TAGAACAGATTATAAG",3,42.07,10.82,0.06,0.06,2.98,1,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","TAGAACAGTAATAGGG",7,41.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44I I80V C158R",3
"lib1","SARS-CoV-2","TAGAACAGTATCCAAA",3,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y G51F C61P S129Y",4
"lib1","SARS-CoV-2","TAGAACAGTCAGTGCA",6,1.03,NA,NA,NA,NA,NA,NA,"stop","F12M F62L P82*",3
"lib1","SARS-CoV-2","TAGAACAGTTAATCCA",3,40.11,9.74,-1.02,0.07,2.84,1.07,0,"1 nonsynonymous","Y121P",1
"lib1","SARS-CoV-2","TAGAACATAAATACGA",2,20.55,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","I2T G51T F62N R78C W106L S129F E135T F160C",8
"lib1","SARS-CoV-2","TAGAACATATAGGTTG",1,10.71,10.31,-0.45,0.18,2.64,1.02,0.01,">1 nonsynonymous","P7C F185L",2
"lib1","SARS-CoV-2","TAGAACATATGAAGCA",5,51.82,9.35,-1.41,0.08,2.83,1.07,0,"1 nonsynonymous","E154Y",1
"lib1","SARS-CoV-2","TAGAACATTATCAACC",3,9.02,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","L183P",1
"lib1","SARS-CoV-2","TAGAACATTCTGAAAC",3,39.15,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11A G155L Y175C",3
"lib1","SARS-CoV-2","TAGAACCAAAGCTAAA",5,44.45,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","N1V N64T P82F K87T F99I Y143L Y165K",7
"lib1","SARS-CoV-2","TAGAACCAAATGACAT",1,8.5,NA,NA,NA,NA,NA,NA,"stop","K114* I142L",2
"lib1","SARS-CoV-2","TAGAACCACTAAAAAC",1,11.77,6.09,-4.68,0.9,1.5,1.14,0.02,">1 nonsynonymous","V11R S41R Q84M T100H K128Y I142L G155A",7
"lib1","SARS-CoV-2","TAGAACCATACACAAC",5,6.32,6.65,-4.12,1.19,1.55,1.28,0.06,">1 nonsynonymous","E10C A67D T100V",3
"lib1","SARS-CoV-2","TAGAACCATCGCCAAA",2,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72A F185N",2
"lib1","SARS-CoV-2","TAGAACCATGCACGAT",1,0.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","TAGAACCCAGTAGCCT",5,11.95,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12L Y35T K56T P82Q Y121R N157S",6
"lib1","SARS-CoV-2","TAGAACCCTCTCGTTT",3,6.22,8.07,-2.69,0.51,1.79,1.34,0.03,">1 nonsynonymous","G74M A192R",2
"lib1","SARS-CoV-2","TAGAACCGACGAAACG",1,19.29,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A67I D97L C158L",3
"lib1","SARS-CoV-2","TAGAACCGACTCCCAT",2,26.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D34A R73K R179E",3
"lib1","SARS-CoV-2","TAGAACCGCGACGGCT",6,133.63,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","S43Y K56V L95P A105E L122T N171H G174R",7
"lib1","SARS-CoV-2","TAGAACCGGGCCATCA",5,112.81,6.1,-4.67,0.58,1.5,1.16,0.01,">1 nonsynonymous","L38T G86Y",2
"lib1","SARS-CoV-2","TAGAACCTACCTCCAA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","F99G P133N T140S P191*",4
"lib1","SARS-CoV-2","TAGAACCTTAATTTAC",7,23.26,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N13H G83D I88F Y93W K128L",5
"lib1","SARS-CoV-2","TAGAACCTTACAAGTG",1,31.52,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A33M L60G C150H S164P Y178F",5
"lib1","SARS-CoV-2","TAGAACCTTTACGATC",4,31.34,10.1,-0.67,0.08,2.67,1.05,0,">1 nonsynonymous","F134I A190S",2
"lib1","SARS-CoV-2","TAGAACGAAATCATCC",6,111.49,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F62D K87N G172K V180I",4
"lib1","SARS-CoV-2","TAGAACGAATGCAGAA",1,23.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y39D L60N P96V F156S",4
"lib1","SARS-CoV-2","TAGAACGATATCCAGG",2,93.65,9.52,-1.24,0.11,1.65,1.12,0,">1 nonsynonymous","R127N D137H K199W",3
"lib1","SARS-CoV-2","TAGAACGTAAAGGGAT",7,113.81,10.56,-0.2,0.05,2.94,1.02,0,">1 nonsynonymous","S129C F160D",2
"lib1","SARS-CoV-2","TAGAACGTGAATCGCT",4,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E S41K D90R V180R",4
"lib1","SARS-CoV-2","TAGAACGTGCATTAAG",1,13.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S113K P161G Y175V",3
"lib1","SARS-CoV-2","TAGAACTAACGAGGAT",5,112.9,9.07,-1.69,0.06,2.66,1.13,0,">1 nonsynonymous","Y143L F160V",2
"lib1","SARS-CoV-2","TAGAACTACGGCAAGC",4,42.96,8.56,-2.2,0.14,1.55,1.14,0.01,">1 nonsynonymous","N4K V20G V37F N151T",4
"lib1","SARS-CoV-2","TAGAACTCAGGAACAC",6,1.4,NA,NA,NA,NA,NA,NA,"stop","I2* K94W I138H",3
"lib1","SARS-CoV-2","TAGAACTTTTATACAC",9,3.51,NA,NA,NA,NA,NA,NA,"stop","E10A N58H V71*",3
"lib1","SARS-CoV-2","TAGAAGAAAAGATTTA",7,57.67,10.62,-0.15,0.06,2.9,1.03,0,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","TAGAAGAAAGCTACTA",11,134.79,10.7,-0.07,0.05,2.92,1.02,0,">1 nonsynonymous","N1S E141V",2
"lib1","SARS-CoV-2","TAGAAGAAGACGACTG",1,10.54,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","S69K I88R I104C I138P S184V",5
"lib1","SARS-CoV-2","TAGAAGAATACAAATA",1,11.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23F S41R C61F P177K",4
"lib1","SARS-CoV-2","TAGAAGACACTTCAAG",2,37.01,10.69,-0.08,0.07,2.98,1,0,">1 nonsynonymous","K114L T140Q",2
"lib1","SARS-CoV-2","TAGAAGAGTGCGATAA",6,54.78,10.82,0.06,0.08,2.91,1.06,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","TAGAAGATAATGACAG",4,3.14,NA,NA,NA,NA,NA,NA,"stop","E10* Y50D",2
"lib1","SARS-CoV-2","TAGAAGATGAGCAAAA",7,108.34,10.78,0.01,0.05,2.9,1.05,0,"1 nonsynonymous","S164N",1
"lib1","SARS-CoV-2","TAGAAGCAAATGAAAA",1,1.44,NA,NA,NA,NA,NA,NA,"stop","T3G F17* R27G F44N C49L T100S",6
"lib1","SARS-CoV-2","TAGAAGCACAGAAGGT",2,155.24,10.34,-0.42,0.05,2.95,1.01,0,">1 nonsynonymous","P54M F156L",2
"lib1","SARS-CoV-2","TAGAAGCAGCATAACA",1,31.31,11,0.24,0.1,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAAGCATAAAGAAT",2,66.29,10.16,-0.61,0.1,2.26,1.06,0,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","TAGAAGCCGAATACCC",5,15.8,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","D34I L60Y L95I N120F N157S",5
"lib1","SARS-CoV-2","TAGAAGGAAACATAAG",4,93.52,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50E Y159S",2
"lib1","SARS-CoV-2","TAGAAGGATGTAATAA",12,206.56,8.16,-2.6,0.12,2.56,1.12,0.01,">1 nonsynonymous","L5K T55E T140N Y143G F160R",5
"lib1","SARS-CoV-2","TAGAAGGATTCATGAG",4,0.28,NA,NA,NA,NA,NA,NA,"stop","T46R L95M Y165* Y178F",4
"lib1","SARS-CoV-2","TAGAAGTACGGACAAT",1,9.41,10.94,0.17,0.11,3,1.01,0,"1 nonsynonymous","A42G",1
"lib1","SARS-CoV-2","TAGAAGTATCGCTTAA",10,143.63,10.68,-0.08,0.04,2.92,1.05,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","TAGAAGTCAACGTTCG",11,2.64,NA,NA,NA,NA,NA,NA,"stop","S53E Y121* E135S",3
"lib1","SARS-CoV-2","TAGAAGTGAGTTGCAT",7,1.05,NA,NA,NA,NA,NA,NA,"stop","C102W G116T P161*",3
"lib1","SARS-CoV-2","TAGAAGTTGGCCAAAC",4,0.19,NA,NA,NA,NA,NA,NA,"stop","V11Y Y35I C61S K94D V103* K132L",6
"lib1","SARS-CoV-2","TAGAAGTTTTTCAGAA",3,17.85,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","R16S P82K L131P E141A",4
"lib1","SARS-CoV-2","TAGAATAAACGCACAC",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G T85I T201D",3
"lib1","SARS-CoV-2","TAGAATAAATCTCCAT",6,3.05,NA,NA,NA,NA,NA,NA,"stop","G9I T15* I80Q",3
"lib1","SARS-CoV-2","TAGAATAACGCACGTG",3,63.67,10.53,-0.23,0.07,2.81,1.09,0,">1 nonsynonymous","L60I Q79N L122K",3
"lib1","SARS-CoV-2","TAGAATAATAAGGTCC",2,36.28,6.43,-4.33,0.7,1.5,1.13,0.05,">1 nonsynonymous","Y21R L60K T170L",3
"lib1","SARS-CoV-2","TAGAATAATACTACTA",3,31.32,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","S36M C49G P197A T201S",4
"lib1","SARS-CoV-2","TAGAATACAGATACAA",2,41.42,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N92S A145K G155Y",3
"lib1","SARS-CoV-2","TAGAATACATTTTGGT",13,193.97,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5T S53L Y91S Y165T T170M K199M",6
"lib1","SARS-CoV-2","TAGAATACTCAAATGA",3,0.92,NA,NA,NA,NA,NA,NA,"stop","F12V D59* Y123R",3
"lib1","SARS-CoV-2","TAGAATACTTAATCGT",6,59.53,8.43,-2.33,0.26,1.5,1.03,0.02,">1 nonsynonymous","G9K F44S P133T G174L",4
"lib1","SARS-CoV-2","TAGAATAGACTCCAGT",2,72.64,10.28,-0.48,0.04,2.88,1.03,0,"1 nonsynonymous","K87G",1
"lib1","SARS-CoV-2","TAGAATAGCCAACCCA",3,28.44,10.48,-0.29,0.06,2.87,1.03,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","TAGAATAGTACGCATT",2,16.89,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","L95S S129N P149E",3
"lib1","SARS-CoV-2","TAGAATAGTAGGACCA",3,10.38,6.53,-4.23,0.62,3,1.04,0.01,">1 nonsynonymous","F44M D68G K87D",3
"lib1","SARS-CoV-2","TAGAATAGTATGCGAC",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25V S41T T85G Y93A T100N",5
"lib1","SARS-CoV-2","TAGAATATAAAAGATA",3,16.44,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G86R D97F Y143L T201I",4
"lib1","SARS-CoV-2","TAGAATATAAAGGAAT",7,74.13,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N107F D137R",2
"lib1","SARS-CoV-2","TAGAATATACAACTAG",5,12.33,7.71,-3.05,0.33,1.5,1.11,0.04,">1 nonsynonymous","C31R S36R F99T",3
"lib1","SARS-CoV-2","TAGAATATCGACCTCA",2,20.86,9.65,-1.11,0.16,2.58,1.13,0.01,">1 nonsynonymous","S113A I142K",2
"lib1","SARS-CoV-2","TAGAATATGACCGTAA",4,111.59,10.24,-0.52,0.05,2.94,1.01,0,">1 nonsynonymous","T55A E154H",2
"lib1","SARS-CoV-2","TAGAATATGAGATCGA",7,84.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N92I P133Q I142F G152P",4
"lib1","SARS-CoV-2","TAGAATATTAAAGAAC",1,17.13,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F12Q C31T V37H A42V P161I Y178C",6
"lib1","SARS-CoV-2","TAGAATATTGGATCCG",7,2.41,NA,NA,NA,NA,NA,NA,"stop","K94* R127K R136E",3
"lib1","SARS-CoV-2","TAGAATCAAGGTAGTG",1,1.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96Q",1
"lib1","SARS-CoV-2","TAGAATCACCAACGCA",1,4.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7L",1
"lib1","SARS-CoV-2","TAGAATCGTTAAAAAT",8,61.81,10.65,-0.12,0.05,2.96,1.01,0,">1 nonsynonymous","K114R N130T T140L",3
"lib1","SARS-CoV-2","TAGAATCTCCGCAGGA",7,99.07,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N1S Y159Q F167L A190D",4
"lib1","SARS-CoV-2","TAGAATGACTGAACAA",5,8.02,6.28,-4.48,0.73,1.5,1.14,0.03,">1 nonsynonymous","N13K D98N W106M K114I V173S",5
"lib1","SARS-CoV-2","TAGAATGCCCGATAAA",6,59.87,10.06,-0.7,0.07,2.46,1.01,0,">1 nonsynonymous","Q84N L122V P149T",3
"lib1","SARS-CoV-2","TAGAATGCTTCTATTT",6,33.76,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K94V W106E L187E",3
"lib1","SARS-CoV-2","TAGAATGGCGCTAACC",10,63.08,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","C61L A67N N118S",3
"lib1","SARS-CoV-2","TAGAATGGGCTCGGGA",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L N64T G74R",3
"lib1","SARS-CoV-2","TAGAATGGGTTGGTTC",8,65.91,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10C A42L G51R N64W G74I Y93P F99W G152R F167T",9
"lib1","SARS-CoV-2","TAGAATGGTATGACGA",1,10.98,6,-4.76,2,3,1.07,0,">1 nonsynonymous","V71A C158T V173S",3
"lib1","SARS-CoV-2","TAGAATGTGTGTAATA",2,26.36,10.65,-0.11,0.07,2.88,1.11,0,"1 nonsynonymous","L5C",1
"lib1","SARS-CoV-2","TAGAATGTTTTGAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* P191M K198L",3
"lib1","SARS-CoV-2","TAGAATTAAACATACA",2,29.73,10.8,0.04,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGAATTAACTCCGCA",3,11.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12V C49K V103F F134R A145C",5
"lib1","SARS-CoV-2","TAGAATTAACTGAACA",1,2.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50P",1
"lib1","SARS-CoV-2","TAGAATTATATCAGTT",4,45.77,8.94,-1.83,0.18,1.5,1.17,0.01,">1 nonsynonymous","L5M Y35Q V77M",3
"lib1","SARS-CoV-2","TAGAATTCAGACCAGT",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29L L60H",2
"lib1","SARS-CoV-2","TAGAATTGCTATGACA",9,135.77,10.71,-0.06,0.03,2.94,1.03,0,"1 nonsynonymous","E141Q",1
"lib1","SARS-CoV-2","TAGAATTTGAATCAAA",3,1.36,NA,NA,NA,NA,NA,NA,"stop","L5* F17V K128Y E141R F160R",5
"lib1","SARS-CoV-2","TAGAATTTGTTTTCTA",1,36.17,9.01,-1.76,0.21,2.17,1.07,0.02,">1 nonsynonymous","N4T G51Y K132E F156L",4
"lib1","SARS-CoV-2","TAGAATTTTAGTTTTG",5,1.79,NA,NA,NA,NA,NA,NA,"stop","F44D Y123L F134P E141S C158I Q168* T201L",7
"lib1","SARS-CoV-2","TAGAATTTTCATCAGC",10,94.5,7.96,-2.8,0.27,1.5,1.08,0.03,">1 nonsynonymous","I2E D98V S129L Y178L",4
"lib1","SARS-CoV-2","TAGAATTTTTAACACA",1,42.89,9.26,-1.5,0.09,2.87,1.18,0,">1 nonsynonymous","V52C L125H F160N",3
"lib1","SARS-CoV-2","TAGAATTTTTATGTGT",7,13.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48E C102R K114I P133L I142N G166R",6
"lib1","SARS-CoV-2","TAGACAAAACTTCACG",4,59.54,8.2,-2.56,0.19,1.76,1.05,0.01,">1 nonsynonymous","Q84L D98T A145Y T201V",4
"lib1","SARS-CoV-2","TAGACAAAAGTGCTCT",2,12.31,10.14,-0.62,0.12,2.84,1,0.01,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","TAGACAAACCTACGCT",4,13.42,6,-4.76,2,1.5,1.33,0.06,">1 nonsynonymous","D34R F44S L57K Y121L",4
"lib1","SARS-CoV-2","TAGACAAAGTACCCTG",8,90.13,9.22,-1.55,0.19,1.5,1.03,0.02,">1 nonsynonymous","L38V L122N S139I",3
"lib1","SARS-CoV-2","TAGACAACAGAGGACA",11,3.56,NA,NA,NA,NA,NA,NA,"stop","A14L G51V L125N D137L E141K S184* L188R",7
"lib1","SARS-CoV-2","TAGACAACGCCATAAC",2,33.79,10.06,-0.71,0.13,2.5,1.07,0.01,">1 nonsynonymous","F44S C61E Y123M",3
"lib1","SARS-CoV-2","TAGACAACGTCTAGTA",5,26.91,10.74,-0.03,0.12,2.93,1,0.01,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","TAGACAAGCCCGTGAC",3,23.9,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","A42T D68K N110W F134D I142D G155M N171R",7
"lib1","SARS-CoV-2","TAGACAAGTCTCGGCT",4,22.61,6,-4.76,2,2.42,1.14,0.01,">1 nonsynonymous","F44S F70S",2
"lib1","SARS-CoV-2","TAGACAATCTATAATA",2,9.99,9.56,-1.2,0.33,1.66,1,0.03,"1 nonsynonymous","D137Q",1
"lib1","SARS-CoV-2","TAGACAATGCACCATA",5,15.72,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A42L D68R Y91F Y121P",4
"lib1","SARS-CoV-2","TAGACACCAATACTCA",9,158.44,10.71,-0.05,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGACACCTTGGGTAC",9,91.48,9.46,-1.3,0.11,1.91,1.13,0,">1 nonsynonymous","V37N Y91S D97S",3
"lib1","SARS-CoV-2","TAGACACGATAAATCT",5,101.12,7.73,-3.04,0.12,1.94,1.12,0,">1 nonsynonymous","T85M L125H I142R",3
"lib1","SARS-CoV-2","TAGACACGCATGTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q Y66T",2
"lib1","SARS-CoV-2","TAGACACGTTGCGGAT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N S108Q K114M N120R N157H",5
"lib1","SARS-CoV-2","TAGACACTCTACATTA",1,5.41,7.47,-3.29,0.43,1.5,1,0.04,">1 nonsynonymous","K87S T100A A105S S113D L131I N157V S200I",7
"lib1","SARS-CoV-2","TAGACAGAATATAATA",3,30.05,6.11,-4.66,0.45,1.5,1.13,0.01,">1 nonsynonymous","F12D G83K V103Q",3
"lib1","SARS-CoV-2","TAGACAGAATATCCCA",7,54.17,10.64,-0.12,0.04,2.9,1.08,0,">1 nonsynonymous","T55Y T85I",2
"lib1","SARS-CoV-2","TAGACAGAATTTAATA",5,144.09,9.96,-0.81,0.07,2.64,1.03,0,">1 nonsynonymous","F44V A89P H189R",3
"lib1","SARS-CoV-2","TAGACAGACTATGAAT",3,73.41,10.02,-0.74,0.08,2.17,1,0,"1 nonsynonymous","V11D",1
"lib1","SARS-CoV-2","TAGACAGGTTGAACAC",9,202.78,10.65,-0.12,0.05,2.88,1.07,0,"1 nonsynonymous","G116E",1
"lib1","SARS-CoV-2","TAGACATAAAAAGAGG",8,144.48,10.71,-0.05,0.02,2.93,1,0,"1 nonsynonymous","V52C",1
"lib1","SARS-CoV-2","TAGACATAAACTTATC",5,31.36,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35P V103S S200T",3
"lib1","SARS-CoV-2","TAGACATAATACCCGC",6,120.18,9.81,-0.96,0.06,2.83,1.03,0,">1 nonsynonymous","A145S P149L G174R",3
"lib1","SARS-CoV-2","TAGACATACAAGCATA",2,51.06,10.1,-0.67,0.07,2.79,1.01,0,">1 nonsynonymous","S164Y V173P",2
"lib1","SARS-CoV-2","TAGACATACCCACTCA",1,10.24,9.6,-1.16,0.29,2.16,1.21,0.03,">1 nonsynonymous","G83L F99Y",2
"lib1","SARS-CoV-2","TAGACATACGCACCCG",5,150.24,10.73,-0.03,0.07,2.91,1.05,0,">1 nonsynonymous","S129R T201R",2
"lib1","SARS-CoV-2","TAGACATACGGTTTCA",7,112.44,10.76,0,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGACATACGTTAGTA",7,1.28,NA,NA,NA,NA,NA,NA,"stop","T100* A145C K198*",3
"lib1","SARS-CoV-2","TAGACATAGCCTCTTG",3,59.95,9.82,-0.95,0.1,2.13,1.04,0,"1 nonsynonymous","C102F",1
"lib1","SARS-CoV-2","TAGACATATCTACGCG",2,36.71,10.46,-0.31,0.12,2.82,1.02,0.01,">1 nonsynonymous","D90A F160V",2
"lib1","SARS-CoV-2","TAGACATCATTCAACT",14,1.92,NA,NA,NA,NA,NA,NA,"stop","V32*",1
"lib1","SARS-CoV-2","TAGACATCGTTAGTAG",5,115.44,10.05,-0.72,0.04,2.62,1.03,0,">1 nonsynonymous","A33T P96S S147I",3
"lib1","SARS-CoV-2","TAGACATCTAACTAAG",6,39.21,7.69,-3.07,0.27,1.5,1.11,0.02,"1 nonsynonymous","G86C",1
"lib1","SARS-CoV-2","TAGACATGCCCGTAGA",5,23.95,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F44I C102F G117L S164K",4
"lib1","SARS-CoV-2","TAGACATGGGCCATGG",2,110.53,8.71,-2.05,0.1,2.57,1.09,0,">1 nonsynonymous","F156V Q176K",2
"lib1","SARS-CoV-2","TAGACATGTAATATAG",2,22.36,10.82,0.06,0.07,2.88,1.04,0,"1 nonsynonymous","V77I",1
"lib1","SARS-CoV-2","TAGACATGTCTACGCA",5,22.96,6.05,-4.72,1.41,1.5,1.15,0.03,">1 nonsynonymous","A81G G86V K128L",3
"lib1","SARS-CoV-2","TAGACATTATAATCTA",1,37.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S69K A105C P133F P177L",4
"lib1","SARS-CoV-2","TAGACCAAGGTCTCAC",9,124.75,10.58,-0.19,0.03,2.91,1.03,0,">1 nonsynonymous","T15D P149K",2
"lib1","SARS-CoV-2","TAGACCAAGTATAAAA",4,1.27,NA,NA,NA,NA,NA,NA,"stop","E10* L57A P133L",3
"lib1","SARS-CoV-2","TAGACCACAAAGAAAA",2,28.88,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9A F44L P82W Q144K",4
"lib1","SARS-CoV-2","TAGACCACCCAAGAAA",1,24.94,9.7,-1.07,0.18,1.82,1.13,0.02,">1 nonsynonymous","A22G Q144I",2
"lib1","SARS-CoV-2","TAGACCACCTAATTGT",3,123.05,8.58,-2.19,0.1,2.26,1.11,0,"1 nonsynonymous","Q176W",1
"lib1","SARS-CoV-2","TAGACCAGTCCCCAAA",3,9.4,9.79,-0.97,0.29,2.27,1.06,0.02,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","TAGACCATAACAACCC",1,19.08,6,-4.76,2,3,1.09,0,">1 nonsynonymous","K56H G86M N107H I142R",4
"lib1","SARS-CoV-2","TAGACCATGAATAGCC",2,56.73,10.4,-0.36,0.08,2.82,1.06,0,">1 nonsynonymous","G51S N130I",2
"lib1","SARS-CoV-2","TAGACCATTCTCTGCT",8,291.04,10,-0.76,0.09,2.31,1.06,0,">1 nonsynonymous","K56V D98V N120S V153G",4
"lib1","SARS-CoV-2","TAGACCCAGCAAATAC",3,18.14,10.85,0.09,0.06,2.89,1.07,0,">1 nonsynonymous","R27T D59N",2
"lib1","SARS-CoV-2","TAGACCGCACCTCCAT",1,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40Q",1
"lib1","SARS-CoV-2","TAGACCGCCCCACACG",2,20.22,9.87,-0.89,0.16,2.05,1,0.01,"1 nonsynonymous","F12S",1
"lib1","SARS-CoV-2","TAGACCGCGGAGAGAG",4,44.11,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y35F G51N S69E Y123C K132N",5
"lib1","SARS-CoV-2","TAGACCGCTGTGCCTT",3,23.99,NA,NA,NA,NA,NA,NA,"stop","I88R F99P A105* G155V",4
"lib1","SARS-CoV-2","TAGACCGTCATCGTTA",4,119.3,10.71,-0.05,0.05,2.9,1.03,0,"1 nonsynonymous","T63N",1
"lib1","SARS-CoV-2","TAGACCGTTACTCTCA",3,16.43,7.36,-3.4,0.41,1.5,1.17,0.05,">1 nonsynonymous","A42L K48F G117L P169T",4
"lib1","SARS-CoV-2","TAGACCTAAAGGTCGA",7,1.79,NA,NA,NA,NA,NA,NA,"stop","C49* Y121L",2
"lib1","SARS-CoV-2","TAGACCTACGCCCCAT",2,61.92,10.74,-0.02,0.02,2.98,1,0,">1 nonsynonymous","Y39S D59S N151M",3
"lib1","SARS-CoV-2","TAGACCTAGGTTAATG",5,9.37,6.47,-4.29,0.3,2.51,1.03,0.01,">1 nonsynonymous","T3R F17M L38Y N92Q V115G",5
"lib1","SARS-CoV-2","TAGACCTATATAAAGT",3,69.9,6,-4.76,1.74,1.5,1.28,0.02,">1 nonsynonymous","Y39L Y91A T100S G117T",4
"lib1","SARS-CoV-2","TAGACCTATGTCTAAA",12,135.01,10.8,0.03,0.07,2.94,1.03,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","TAGACCTTTCATGTTG",2,15.31,10.74,-0.03,0.07,2.97,1,0,">1 nonsynonymous","Y35C L122Q",2
"lib1","SARS-CoV-2","TAGACGAACTAATATA",6,0.73,NA,NA,NA,NA,NA,NA,"stop","F12* C61* G86C C150S",4
"lib1","SARS-CoV-2","TAGACGAACTCTAAGC",8,87.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39H F70L I80L T100Y",4
"lib1","SARS-CoV-2","TAGACGAATATTCATA",5,71.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R27G F62S Y165V",3
"lib1","SARS-CoV-2","TAGACGACTTCTTACG",6,131.51,10.07,-0.7,0.06,2.86,1.01,0,">1 nonsynonymous","K56R R78L G116M",3
"lib1","SARS-CoV-2","TAGACGATACTAAATT",4,19.31,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I28Y K56S F99I W106L G146L",5
"lib1","SARS-CoV-2","TAGACGATACTCCTCA",2,12.37,8.55,-2.22,0.16,2.6,1.04,0.01,">1 nonsynonymous","C61H G83R K128L P169W",4
"lib1","SARS-CoV-2","TAGACGATTGGACCTG",2,54.29,6.08,-4.69,0.66,1.5,1.15,0.01,">1 nonsynonymous","P96T V173A Y178L",3
"lib1","SARS-CoV-2","TAGACGCACGATATGG",4,0,NA,NA,NA,NA,NA,NA,"stop","G9* T55N V65Y R136W",4
"lib1","SARS-CoV-2","TAGACGCACTCTATAA",1,9.73,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","Y93N G152N",2
"lib1","SARS-CoV-2","TAGACGCAGCCACGTC",7,26.55,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5R Y39M D75I V103F P197T",5
"lib1","SARS-CoV-2","TAGACGCGAGCTAGAT",1,7.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35D V182N",2
"lib1","SARS-CoV-2","TAGACGCTAGTACCCA",3,88.92,9.81,-0.95,0.11,1.9,1.09,0,">1 nonsynonymous","L5R S45Q N107S S164M",4
"lib1","SARS-CoV-2","TAGACGCTCAACTAAT",2,32.31,9.93,-0.83,0.11,2.06,1,0.01,">1 nonsynonymous","P7F A14P",2
"lib1","SARS-CoV-2","TAGACGGTAGGCTTTT",5,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q L57F V77L G86V P161K",5
"lib1","SARS-CoV-2","TAGACGGTATTAATAC",2,13.65,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99T N110M K199R",3
"lib1","SARS-CoV-2","TAGACGGTCCAAAGTA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","C6R N171* K199L",3
"lib1","SARS-CoV-2","TAGACGGTCGCATCAT",6,0.96,NA,NA,NA,NA,NA,NA,"stop","V37S Y119Q F156* L162S",4
"lib1","SARS-CoV-2","TAGACGTATAGAACTA",2,15.7,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","G51N L60C S69V P82K N120P",5
"lib1","SARS-CoV-2","TAGACGTATCAACTAA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","A33C F44I Q176*",3
"lib1","SARS-CoV-2","TAGACGTGAAACTATT",5,68.37,8.07,-2.7,0.12,1.8,1.07,0.01,">1 nonsynonymous","S113E L122T",2
"lib1","SARS-CoV-2","TAGACGTTTGTCGCCA",3,46.77,10.69,-0.07,0.11,2.93,1.05,0.01,"1 nonsynonymous","T46I",1
"lib1","SARS-CoV-2","TAGACTAAAATATCAG",1,8,9.79,-0.97,0.32,2.38,1.02,0.01,">1 nonsynonymous","N64K A105V",2
"lib1","SARS-CoV-2","TAGACTAAAGCAGATC",2,17.03,10.75,-0.01,0.09,2.92,1.05,0,">1 nonsynonymous","A18S G83F",2
"lib1","SARS-CoV-2","TAGACTAATTTAAAGA",1,23.29,8.63,-2.13,0.04,2.73,1.05,0,">1 nonsynonymous","F47I S53V Y119L T193N K199C",5
"lib1","SARS-CoV-2","TAGACTACATTTCAAA",7,136.94,9.88,-0.88,0.06,2.16,1.02,0,">1 nonsynonymous","P149S V181M",2
"lib1","SARS-CoV-2","TAGACTACCCCTCCAC",2,24.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y35S D59G R179V",3
"lib1","SARS-CoV-2","TAGACTACCCTAAGTT",3,75.08,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V37D C49V L60D N120F V180G K199T",6
"lib1","SARS-CoV-2","TAGACTAGCCCAAAAC",4,64.07,10.14,-0.63,0.12,2.17,1.02,0.01,">1 nonsynonymous","N1L G51A Y91F",3
"lib1","SARS-CoV-2","TAGACTAGCCCTCCGG",1,7.43,10.09,-0.67,0.2,2.56,1,0.02,"1 nonsynonymous","A89H",1
"lib1","SARS-CoV-2","TAGACTATAAGATTCA",2,51.37,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N30G L95W D98M",3
"lib1","SARS-CoV-2","TAGACTATAATCAATA",2,35.94,10.93,0.17,0.07,2.93,1,0,"1 nonsynonymous","Y123M",1
"lib1","SARS-CoV-2","TAGACTATATAACCTA",4,19.3,6,-4.76,2,3,1.13,0,">1 nonsynonymous","E10M N92A N120L",3
"lib1","SARS-CoV-2","TAGACTATATACTATG",5,25.08,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","Y21L F47S F70T I88D",4
"lib1","SARS-CoV-2","TAGACTATATTTTTCC",2,1.01,NA,NA,NA,NA,NA,NA,"stop","D97H Y143*",2
"lib1","SARS-CoV-2","TAGACTATGTTTTGAT",4,4.11,NA,NA,NA,NA,NA,NA,"stop","E10* A22R V37A I142G",4
"lib1","SARS-CoV-2","TAGACTATTGAAAAAA",2,38.3,10.76,-0.01,0.05,2.84,1.11,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TAGACTCAATAAACGA",9,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81G K87S Y123G G174W",4
"lib1","SARS-CoV-2","TAGACTCAATATAAGT",10,172.2,9.99,-0.78,0.07,2.3,1.07,0,">1 nonsynonymous","S43R Y50M",2
"lib1","SARS-CoV-2","TAGACTCAGTGTATAT",4,9.2,6.9,-3.86,0.56,1.79,1.03,0.05,">1 nonsynonymous","N4H V103K P169G",3
"lib1","SARS-CoV-2","TAGACTCCAAACGTCC",1,1.82,NA,NA,NA,NA,NA,NA,"stop","C61* R136D P149T F167S",4
"lib1","SARS-CoV-2","TAGACTCCACCCTACG",2,79.66,6,-4.76,1.55,1.5,1.12,0.02,">1 nonsynonymous","D112Y Y119M",2
"lib1","SARS-CoV-2","TAGACTCCCGTTTCTT",1,6.59,10.82,0.06,0.3,2.75,1.11,0.02,"wildtype","",0
"lib1","SARS-CoV-2","TAGACTCCGGTTGGAC",4,42.78,10.97,0.21,0.1,2.96,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGACTCGTCTAAATA",1,25.04,10.66,-0.11,0.06,2.93,1.06,0,">1 nonsynonymous","N4A R73K",2
"lib1","SARS-CoV-2","TAGACTCTTTGGATTA",5,29.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86V Y93H G116S",3
"lib1","SARS-CoV-2","TAGACTGAATTAATAT",10,49.22,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G83C F99S F134V T201S",4
"lib1","SARS-CoV-2","TAGACTGAATTGGGGC",2,12.9,7.51,-3.25,0.47,1.5,1,0.06,">1 nonsynonymous","T3K P96L C102I F126P F156D L162T",6
"lib1","SARS-CoV-2","TAGACTGCATCTAACC",1,13.41,10.8,0.03,0.08,3,1.01,0,"1 nonsynonymous","S147N",1
"lib1","SARS-CoV-2","TAGACTGTGTTTGAAA",1,58.72,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","V37P P96R Q176R",3
"lib1","SARS-CoV-2","TAGACTTATTATTAAT",6,159.12,10.78,0.02,0.05,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGACTTGTAGTGAAA",2,49.83,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7V L38I D90S Y119A I138F Q144T K198A",7
"lib1","SARS-CoV-2","TAGACTTGTCCATCCT",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P L60S N107A",3
"lib1","SARS-CoV-2","TAGAGAAAATCCAAAA",2,32.1,8.81,-1.95,0.1,2.73,1.16,0.01,"1 nonsynonymous","F126R",1
"lib1","SARS-CoV-2","TAGAGAAACCATAACC",1,5.73,10.88,0.12,0.2,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAGAAACCCGTAAC",7,32.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","W106S K114R P133L F156P",4
"lib1","SARS-CoV-2","TAGAGAAACCGATAAG",3,23.18,10.57,-0.2,0.09,2.89,1.08,0,">1 nonsynonymous","V37K N120L",2
"lib1","SARS-CoV-2","TAGAGAAATAAATTAC",3,8.44,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","P82K W106A N120V R127N F134E",5
"lib1","SARS-CoV-2","TAGAGAAATATACATA",6,79.54,8.51,-2.26,0.25,1.5,1.13,0.02,">1 nonsynonymous","A14T K26G V153L K198Y",4
"lib1","SARS-CoV-2","TAGAGAACCTAATCAA",2,30.95,8.19,-2.57,0.19,1.9,1.12,0.01,">1 nonsynonymous","A22E C61V A81V Y119V S200I",5
"lib1","SARS-CoV-2","TAGAGAAGGCGAAATT",1,7.42,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","P96T C158H",2
"lib1","SARS-CoV-2","TAGAGAATAAACTTAC",6,220.33,9.57,-1.19,0.04,2.88,1.06,0,">1 nonsynonymous","R16V G174V",2
"lib1","SARS-CoV-2","TAGAGAATCCCAGCAT",3,9.58,10.52,-0.25,0.13,2.85,1.19,0.01,">1 nonsynonymous","N40S C61V",2
"lib1","SARS-CoV-2","TAGAGAATCTCGGGCA",3,1.45,NA,NA,NA,NA,NA,NA,"stop","P7L T140* P149S",3
"lib1","SARS-CoV-2","TAGAGAATGAGTATTC",3,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95W W106G",2
"lib1","SARS-CoV-2","TAGAGAATGTGTGGAT",8,77.99,6,-4.76,2,3,1.13,0,">1 nonsynonymous","D137C C150S G155L",3
"lib1","SARS-CoV-2","TAGAGAATTACCAATG",2,48.94,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8E S53I K87N P133F Y159N F167Y",6
"lib1","SARS-CoV-2","TAGAGAATTCCGCCTT",2,28.63,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","G86N F99G",2
"lib1","SARS-CoV-2","TAGAGAATTTATCCGA",3,10.64,10.99,0.23,0.14,2.78,1.09,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TAGAGACACAAATAAC",1,15.74,8.56,-2.2,0.28,1.78,1.1,0.03,">1 nonsynonymous","C6F R78M I104V N120L",4
"lib1","SARS-CoV-2","TAGAGACACCATAAAG",10,81.64,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C61G D97N V181Y",3
"lib1","SARS-CoV-2","TAGAGACAGCACTCGA",3,84.27,8.04,-2.73,0.19,2.24,1.11,0.01,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","TAGAGACCCAAATCAT",2,2.63,NA,NA,NA,NA,NA,NA,"stop","E10* R78I",2
"lib1","SARS-CoV-2","TAGAGACCCAATCGTG",5,26.11,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T3R P82N D90P L187H",4
"lib1","SARS-CoV-2","TAGAGACCCATATTGC",4,21.03,10.82,0.05,0.07,3,1.02,0,"1 nonsynonymous","L125M",1
"lib1","SARS-CoV-2","TAGAGACGACACTAAT",6,38.03,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10N F99T P133A",3
"lib1","SARS-CoV-2","TAGAGACGCGCATCAT",2,9,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S19R F126S S164G",3
"lib1","SARS-CoV-2","TAGAGACTAATATTAC",5,28.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3N F134A F167I",3
"lib1","SARS-CoV-2","TAGAGAGCCCATACCT",1,15.62,10.71,-0.05,0.1,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAGAGCGACCACGT",2,21.33,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C6W V20M N40D P82Y G152S F167K R179W",7
"lib1","SARS-CoV-2","TAGAGAGGCGGGAGAA",3,0.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","TAGAGAGTTAAGCAGT",6,1.85,NA,NA,NA,NA,NA,NA,"stop","A14* I72Q",2
"lib1","SARS-CoV-2","TAGAGATAAGTGACAA",3,30.19,8.94,-1.83,0.32,1.5,1.07,0.07,">1 nonsynonymous","F99C P191T",2
"lib1","SARS-CoV-2","TAGAGATATAATGTAG",3,57.01,8.45,-2.32,0.27,1.5,1.07,0.02,">1 nonsynonymous","I28N P133H Q163L",3
"lib1","SARS-CoV-2","TAGAGATCATAACCAG",2,19.62,10.94,0.17,0.11,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAGATTAGTTCTAT",6,78.16,10.54,-0.23,0.06,2.83,1.07,0,">1 nonsynonymous","A42L D97T V173I",3
"lib1","SARS-CoV-2","TAGAGATTATCAGAGG",6,61.5,10.3,-0.46,0.06,2.9,1.04,0,">1 nonsynonymous","L60K L95M L122T",3
"lib1","SARS-CoV-2","TAGAGATTGTGTATTA",5,62.85,10.7,-0.06,0.06,2.9,1.05,0,">1 nonsynonymous","S36D D90N K198F",3
"lib1","SARS-CoV-2","TAGAGCAAATAAACAG",1,6.4,10.82,0.05,0.14,2.98,1,0,"1 nonsynonymous","T85R",1
"lib1","SARS-CoV-2","TAGAGCAATTATTATT",7,154.91,10.69,-0.07,0.04,2.91,1.06,0,"1 nonsynonymous","R78P",1
"lib1","SARS-CoV-2","TAGAGCACGTACAGAT",4,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R T46C L60K A105G S113T",5
"lib1","SARS-CoV-2","TAGAGCAGCGGGCAAC",3,23.16,10.77,0.01,0.05,2.99,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGAGCAGTAAAAAGA",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F A89N W106V R124S I138T",5
"lib1","SARS-CoV-2","TAGAGCAGTACAGCAA",2,1.52,NA,NA,NA,NA,NA,NA,"stop","N64* G74R D90H K132Y",4
"lib1","SARS-CoV-2","TAGAGCATCCTAAAAT",9,169.78,10.22,-0.54,0.02,2.78,1.01,0,">1 nonsynonymous","T63G F134D",2
"lib1","SARS-CoV-2","TAGAGCATGTAGACAA",5,52.46,10.68,-0.08,0.05,2.9,1.07,0,"1 nonsynonymous","C61V",1
"lib1","SARS-CoV-2","TAGAGCATTTCCTCGA",5,39.37,10.55,-0.21,0.08,2.9,1.08,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","TAGAGCCAACAGTGAC",5,56.27,7.86,-2.9,0.19,1.5,1.05,0.02,">1 nonsynonymous","I28R Y35I A42T I138M N157S",5
"lib1","SARS-CoV-2","TAGAGCCAACGAGCTA",6,91.79,6,-4.76,0.7,1.5,1.15,0.01,">1 nonsynonymous","F167N K199Y",2
"lib1","SARS-CoV-2","TAGAGCCAATTGGAAA",9,51.5,6.22,-4.55,1.21,1.5,1.38,0.05,">1 nonsynonymous","I104L V180S",2
"lib1","SARS-CoV-2","TAGAGCCAGAATCTAG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C31I T46L G51* P54L F62L Y91P",6
"lib1","SARS-CoV-2","TAGAGCCATACAATTA",1,58.06,8.66,-2.1,0.16,1.9,1.14,0.01,">1 nonsynonymous","S129V P161V",2
"lib1","SARS-CoV-2","TAGAGCCCATGCCCTA",8,278.39,7.68,-3.09,0.14,1.54,1.12,0.01,">1 nonsynonymous","A14L Y159V",2
"lib1","SARS-CoV-2","TAGAGCCCTTGGAATA",8,87.42,10.58,-0.18,0.05,2.93,1.02,0,"1 nonsynonymous","K56F",1
"lib1","SARS-CoV-2","TAGAGCCGCCAAGCAC",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E S45L V52C P82A S113M V182P",6
"lib1","SARS-CoV-2","TAGAGCCTTGATATCC",3,36.12,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G101P V182M",2
"lib1","SARS-CoV-2","TAGAGCGAGACATCTA",13,104.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P54T R124S",2
"lib1","SARS-CoV-2","TAGAGCGATTATTGTA",4,15.66,6.57,-4.19,0.18,1.5,1.05,0,">1 nonsynonymous","N120R R179I",2
"lib1","SARS-CoV-2","TAGAGCGGTGTCAAGT",6,0.08,NA,NA,NA,NA,NA,NA,"stop","Y91* R136D T148L",3
"lib1","SARS-CoV-2","TAGAGCTACATGATTG",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S F160K Q168N",3
"lib1","SARS-CoV-2","TAGAGCTAGCCCTTCG",2,38.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2Y L57G R127T Y175I T201C",5
"lib1","SARS-CoV-2","TAGAGCTAGGCCAAAA",10,153.76,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T63H F99S L188W",3
"lib1","SARS-CoV-2","TAGAGCTCAAGAGACG",5,32.31,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49H R78V P133G",3
"lib1","SARS-CoV-2","TAGAGCTCTTACGATT",3,40.52,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","A42H F160S F167T Y178S T201K",5
"lib1","SARS-CoV-2","TAGAGCTGAAAGATAA",6,103.05,6.24,-4.53,0.41,1.5,1.16,0.01,">1 nonsynonymous","P82Q T100F Y119S",3
"lib1","SARS-CoV-2","TAGAGCTTAAGTCGTT",5,26.05,6,-4.76,2,3,1.17,0,">1 nonsynonymous","T3L R16N S45K R78C N107R D112R P149F G155H",8
"lib1","SARS-CoV-2","TAGAGCTTCACCGCTT",4,16.87,6.14,-4.63,0.91,1.5,1.14,0.03,">1 nonsynonymous","S45G V103Y N171K",3
"lib1","SARS-CoV-2","TAGAGCTTCTTTCGAG",2,26.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R27K Y143T G166F",3
"lib1","SARS-CoV-2","TAGAGGACACAAAAAC",6,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y K94P",2
"lib1","SARS-CoV-2","TAGAGGACCAAGCGAC",2,18.15,10.23,-0.53,0.08,2.78,1.08,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","TAGAGGACGTTAACGG",9,113.33,10.66,-0.1,0.05,2.89,1.05,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","TAGAGGAGATAATGTT",7,113.69,10.54,-0.22,0.04,2.86,1.03,0,">1 nonsynonymous","E141L G196V",2
"lib1","SARS-CoV-2","TAGAGGAGCCTATCAT",4,50.7,10.69,-0.07,0.04,2.93,1.03,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","TAGAGGCACGTTTTAC",1,36.36,8.61,-2.15,0.3,1.5,1.17,0.03,">1 nonsynonymous","I2F A18T D34G P54I G155T",5
"lib1","SARS-CoV-2","TAGAGGCAGAAGTAAT",4,39.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35R Y50N",2
"lib1","SARS-CoV-2","TAGAGGCGTAAATTTG",7,99.26,10.85,0.08,0.08,2.9,1.05,0,">1 nonsynonymous","V37A V77L",2
"lib1","SARS-CoV-2","TAGAGGGACGTAGAAA",2,12.01,7.52,-3.24,0.3,1.5,1.17,0.02,">1 nonsynonymous","L5W A14V T15I V37R D59E G83R S129F",7
"lib1","SARS-CoV-2","TAGAGGGATAACATAT",12,94.5,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","Y21H V65T S113N Y121I",4
"lib1","SARS-CoV-2","TAGAGGGCTATCATAG",1,28.29,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","L122P G152L",2
"lib1","SARS-CoV-2","TAGAGGGTGTGCCCCG",3,21.11,10.42,-0.35,0.07,2.92,1.04,0,">1 nonsynonymous","N24M V173Y",2
"lib1","SARS-CoV-2","TAGAGGTAACCTAGGC",2,18.51,9.52,-1.24,0.1,2.8,1.03,0.01,">1 nonsynonymous","A42L Q144T F160L",3
"lib1","SARS-CoV-2","TAGAGGTAAGACACGT",5,17.15,6,-4.76,2,1.5,1.23,0.01,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","TAGAGGTTATGATTGA",1,17.6,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y21V A105L",2
"lib1","SARS-CoV-2","TAGAGTAAAGAACTTC",1,21.12,10.04,-0.72,0.24,2.59,1.19,0.03,">1 nonsynonymous","T3Q V32G",2
"lib1","SARS-CoV-2","TAGAGTAACCCACATT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K C49T C61T A81R K132R G172L T201N",7
"lib1","SARS-CoV-2","TAGAGTAAGCACCTAT",9,74.92,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N107I N120L G166L",3
"lib1","SARS-CoV-2","TAGAGTAATTTTATAA",7,139.55,9.85,-0.92,0.12,1.88,1.1,0,">1 nonsynonymous","A42W D97R I138T V180T",4
"lib1","SARS-CoV-2","TAGAGTACAAAGATAC",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q163S V180N",2
"lib1","SARS-CoV-2","TAGAGTACCGTTACCG",1,6.95,6,-4.76,2,3,1.04,0,">1 nonsynonymous","C49T C158V",2
"lib1","SARS-CoV-2","TAGAGTACGCTTACTA",8,175.55,10.58,-0.19,0.05,2.91,1.01,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","TAGAGTATACAGATTA",3,46.86,10.87,0.1,0.08,2.93,1.04,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","TAGAGTATAGGATAAA",3,50.29,10.85,0.09,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAGTGAAAGGAGAA",2,114.71,10.84,0.07,0.08,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGAGTGAAAGTAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Q P54L D59L V65T P169E",5
"lib1","SARS-CoV-2","TAGAGTGACGTGGAGT",3,50.45,10.72,-0.05,0.11,2.85,1.03,0,">1 nonsynonymous","I2T K56E K128Y",3
"lib1","SARS-CoV-2","TAGAGTGATACACACA",10,4.33,NA,NA,NA,NA,NA,NA,"stop","C6T V32L V52A L95F W106* K128G I138T",7
"lib1","SARS-CoV-2","TAGAGTGCGGGGGCTG",2,64.71,10.33,-0.43,0.09,2.74,1.17,0,"1 nonsynonymous","A14C",1
"lib1","SARS-CoV-2","TAGAGTGGCAGAAGGG",4,63.94,9.07,-1.69,0.09,2.79,1.18,0,">1 nonsynonymous","A33L G166I",2
"lib1","SARS-CoV-2","TAGAGTGGCGCCTACC",2,26.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4Q S41I F70N L188V",4
"lib1","SARS-CoV-2","TAGAGTGTATACTGAG",4,1.02,NA,NA,NA,NA,NA,NA,"stop","N4G T55A T63*",3
"lib1","SARS-CoV-2","TAGAGTGTTACTAAAA",2,54.46,10.73,-0.03,0.05,2.89,1.07,0,">1 nonsynonymous","L5H R27Q",2
"lib1","SARS-CoV-2","TAGAGTGTTTTTGTGC",3,20.94,6.16,-4.61,1.04,1.5,1.18,0.04,">1 nonsynonymous","F44T V71A A89S",3
"lib1","SARS-CoV-2","TAGAGTTGAGAGTACA",7,31.25,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V52A D68K N151S",3
"lib1","SARS-CoV-2","TAGAGTTTTACGCAAT",2,16.28,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C61I K94L N107R S129H",4
"lib1","SARS-CoV-2","TAGATAAACAAATGAA",3,28.33,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I72T I88W K94C N130T Q144R L162E R179V A190R T201V",9
"lib1","SARS-CoV-2","TAGATAAACGAAAGCG",5,0.3,NA,NA,NA,NA,NA,NA,"stop","N1* N30L L95G T201R",4
"lib1","SARS-CoV-2","TAGATAAACTACATTT",6,107.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","TAGATAAACTCAGGCA",2,70.41,10.03,-0.73,0.04,2.94,1,0,"1 nonsynonymous","F44N",1
"lib1","SARS-CoV-2","TAGATAAAGAATGAGA",12,1.32,NA,NA,NA,NA,NA,NA,"stop","T85Y T100A K128C E186*",4
"lib1","SARS-CoV-2","TAGATAAAGACTATCA",3,23.61,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P7F V20S D98E T148N",4
"lib1","SARS-CoV-2","TAGATAAAGATCCCGC",1,23.65,10.14,-0.62,0.07,2.87,1,0,">1 nonsynonymous","F44L G155N",2
"lib1","SARS-CoV-2","TAGATAAAGATTTTCT",6,29.63,7.24,-3.52,0.49,1.5,1.19,0.06,">1 nonsynonymous","P82N S200C",2
"lib1","SARS-CoV-2","TAGATAAAGCATATTA",3,7.47,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T63W T85S C102N K114M G146E",5
"lib1","SARS-CoV-2","TAGATAAAGTCTAAAT",8,66.97,8.28,-2.49,0.27,1.5,1.13,0.03,">1 nonsynonymous","L38S G152F",2
"lib1","SARS-CoV-2","TAGATAAATCATAGCC",3,13.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86N W106L",2
"lib1","SARS-CoV-2","TAGATAAATCTGGTGG",1,19.87,10.67,-0.1,0.09,2.79,1.22,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","TAGATAAATGCTATAT",2,41.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L A89S R136C Y165I",4
"lib1","SARS-CoV-2","TAGATAACAATCACAA",5,144.64,10.34,-0.42,0.05,2.95,1.02,0,">1 nonsynonymous","T55S C61D G155T",3
"lib1","SARS-CoV-2","TAGATAACCAATAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y S36G F47C G146K",4
"lib1","SARS-CoV-2","TAGATAACCCCAAAGA",5,36.14,10.71,-0.06,0.05,2.93,1.02,0,"1 nonsynonymous","N130L",1
"lib1","SARS-CoV-2","TAGATAACCCGCCTCT",1,22.72,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L60V A67F L95S T170K V181M",5
"lib1","SARS-CoV-2","TAGATAACGACAATGA",1,6.04,10.77,0,0.15,2.84,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGATAACGACTATCT",2,22.79,9.75,-1.02,0.12,2.49,1.07,0.01,">1 nonsynonymous","C6E A42C",2
"lib1","SARS-CoV-2","TAGATAACGCATACTA",14,118.29,9.88,-0.89,0.09,1.84,1.09,0,">1 nonsynonymous","R16V D97A V103T",3
"lib1","SARS-CoV-2","TAGATAACGCTCTGAT",1,9.31,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K26G C49V C61S Y93L",4
"lib1","SARS-CoV-2","TAGATAACTTGGGGTT",7,68.44,6,-4.76,1.22,1.5,1.29,0.02,">1 nonsynonymous","D34R C49M",2
"lib1","SARS-CoV-2","TAGATAAGCCCGCTAG",2,30.75,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N107I N157A Q168I",3
"lib1","SARS-CoV-2","TAGATAATAAAGCATT",1,19.19,10.54,-0.23,0.12,2.63,1.26,0.01,">1 nonsynonymous","T3K Y39H K199S",3
"lib1","SARS-CoV-2","TAGATAATACGTAAAG",5,70.42,9.85,-0.92,0.15,1.98,1.06,0.01,">1 nonsynonymous","L5N F12T",2
"lib1","SARS-CoV-2","TAGATAATATTTTCGG",8,19.97,8.72,-2.04,0.28,1.5,1.09,0.04,">1 nonsynonymous","T15D C49L",2
"lib1","SARS-CoV-2","TAGATAATCACCTAAC",1,0.56,NA,NA,NA,NA,NA,NA,"stop","I2S A105V P149*",3
"lib1","SARS-CoV-2","TAGATAATGTCAGAAT",2,13.95,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","S69F F99W I138G Y143N E186F",5
"lib1","SARS-CoV-2","TAGATAATTTAGATAT",3,49.32,9.41,-1.36,0.05,2.94,1.05,0,">1 nonsynonymous","Y119W T201I",2
"lib1","SARS-CoV-2","TAGATACAAAACATCA",11,5.72,NA,NA,NA,NA,NA,NA,"stop","N120G K132* K198I",3
"lib1","SARS-CoV-2","TAGATACAAGCTCCCC",2,58.76,9.34,-1.42,0.12,1.91,1.06,0.01,">1 nonsynonymous","I2C V32K R127N",3
"lib1","SARS-CoV-2","TAGATACACAACTAAC",3,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21W A42S I72F N151H T201P",5
"lib1","SARS-CoV-2","TAGATACAGGTGTACT",1,25.53,7.22,-3.54,0.17,1.73,1.14,0.01,"1 nonsynonymous","R73W",1
"lib1","SARS-CoV-2","TAGATACATACCACAT",2,13.88,8.99,-1.77,0.26,1.91,1.06,0.03,">1 nonsynonymous","N1D Q84S A89S T100S Y119V",5
"lib1","SARS-CoV-2","TAGATACATATGAATG",1,14.33,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C49G S69G G83T G101V",4
"lib1","SARS-CoV-2","TAGATACCACTTAACC",1,45.82,8.1,-2.66,0.38,1.5,1,0.07,">1 nonsynonymous","Y39T I88N K132V",3
"lib1","SARS-CoV-2","TAGATACTAAATCCCA",1,133.65,10.15,-0.62,0.04,2.92,1.03,0,">1 nonsynonymous","D98T G174E",2
"lib1","SARS-CoV-2","TAGATACTATAAACAG",4,54.99,6.15,-4.62,0.65,1.5,1.16,0.01,">1 nonsynonymous","S53F I72W G83D L95Y Y178N T201P",6
"lib1","SARS-CoV-2","TAGATACTGTTACTTG",5,5.67,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","TAGATACTTATCTGAA",1,37.62,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92S N107K T140N T170S L188P",5
"lib1","SARS-CoV-2","TAGATAGAAAATTCGA",9,118.67,8.94,-1.82,0.14,1.74,1.12,0.01,">1 nonsynonymous","L38Q N58F K114N",3
"lib1","SARS-CoV-2","TAGATAGAAATTAGTT",2,90.53,10.11,-0.66,0.06,2.75,1.03,0,">1 nonsynonymous","C6Y R16V G152D",3
"lib1","SARS-CoV-2","TAGATAGAAGTGTTAT",5,72.6,9.88,-0.89,0.08,2.62,1.02,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","TAGATAGACATGACTA",1,23.71,8.64,-2.13,0.12,2.61,1.05,0.01,">1 nonsynonymous","D98S S139T F167W",3
"lib1","SARS-CoV-2","TAGATAGACCTTCTTA",2,6.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23Q S43N D97V",3
"lib1","SARS-CoV-2","TAGATAGCAGTTTGTA",1,11.3,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","P82L K94V Y119K P133E C158Y",5
"lib1","SARS-CoV-2","TAGATAGGAAACGAGA",3,9.4,7.11,-3.65,0.45,1.5,1.06,0.03,">1 nonsynonymous","G101E W106R",2
"lib1","SARS-CoV-2","TAGATAGGAAAGGACG",3,65.87,9.95,-0.81,0.09,2.68,1.08,0,">1 nonsynonymous","N92S S129R",2
"lib1","SARS-CoV-2","TAGATAGGATTTATAA",3,80.03,10.59,-0.18,0.04,2.93,1.04,0,"1 nonsynonymous","P96A",1
"lib1","SARS-CoV-2","TAGATAGGGAATACTA",4,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96N S129V C158G",3
"lib1","SARS-CoV-2","TAGATAGTTTATTAAC",3,20.06,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V103Q F160H",2
"lib1","SARS-CoV-2","TAGATATAAATGGCTA",3,31.29,6,-4.76,1.95,1.5,1.13,0.02,">1 nonsynonymous","G9K G86F N120L P133W",4
"lib1","SARS-CoV-2","TAGATATAACGTGAAG",2,32.58,10.76,-0.01,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATATAATATACAA",2,28.43,10.43,-0.34,0.06,2.71,1.07,0,">1 nonsynonymous","T15L N110Y",2
"lib1","SARS-CoV-2","TAGATATAGAGCCAAT",4,0.47,NA,NA,NA,NA,NA,NA,"stop","N107* Q168G Y175L",3
"lib1","SARS-CoV-2","TAGATATATAGCGAGT",2,65.99,7.2,-3.56,0.21,1.53,1.18,0.01,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","TAGATATATTGATACA",4,8.83,9.12,-1.65,0.39,1.5,1.06,0.07,">1 nonsynonymous","K48A P54T R136S N151F",4
"lib1","SARS-CoV-2","TAGATATCCTAAGCAG",5,106.17,8.33,-2.44,0.2,2.38,1.2,0.01,">1 nonsynonymous","S29R L60I Y119H L125C",4
"lib1","SARS-CoV-2","TAGATATCTAGCAAAT",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C S108Q",2
"lib1","SARS-CoV-2","TAGATATCTCTCTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F17N V65W I88S L95H K132S A192*",6
"lib1","SARS-CoV-2","TAGATATGAGATCCCC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","Y35L R73S I88G S113N K128* H189G",6
"lib1","SARS-CoV-2","TAGATATGATCAGTAA",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S D90F E135R",3
"lib1","SARS-CoV-2","TAGATATGCTACCTAA",1,50.11,10.78,0.01,0.06,2.92,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","TAGATATTAATAGATT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","T15Y N120*",2
"lib1","SARS-CoV-2","TAGATATTATAATACC",2,13.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V20S Y119H F134S P161A",4
"lib1","SARS-CoV-2","TAGATATTGCCTCACG",2,80.14,10.38,-0.38,0.04,2.89,1.03,0,">1 nonsynonymous","T15V V153S",2
"lib1","SARS-CoV-2","TAGATATTTAAACCCA",6,27.19,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","C61S Y93R P149F",3
"lib1","SARS-CoV-2","TAGATCAAAATTAGGG",1,20.73,10.64,-0.12,0.07,2.94,1.02,0,">1 nonsynonymous","N4L P54M",2
"lib1","SARS-CoV-2","TAGATCAACATAATAG",7,47.41,6.25,-4.51,0.67,1.5,1.11,0.02,">1 nonsynonymous","Y21F Y50G F99N G116V A190R",5
"lib1","SARS-CoV-2","TAGATCAACGTAAATA",1,12.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9L C49S F160N K199R",4
"lib1","SARS-CoV-2","TAGATCAACTAAAATA",5,61.73,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I2Y N107L N157H S184V",4
"lib1","SARS-CoV-2","TAGATCAAGAAACACA",6,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D V103L N151M T201N",4
"lib1","SARS-CoV-2","TAGATCAAGATTGAGG",4,30.12,7.03,-3.74,0.48,1.5,1.09,0.04,">1 nonsynonymous","I28L C49Y I88C",3
"lib1","SARS-CoV-2","TAGATCACCTCGAATG",2,48.41,8.35,-2.41,0.2,1.93,1.16,0.01,">1 nonsynonymous","D97V S139E G146R P197G",4
"lib1","SARS-CoV-2","TAGATCAGATTAAACA",7,63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K87I R136F S139N N157I",4
"lib1","SARS-CoV-2","TAGATCAGTGACTCTG",2,8.02,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","T15H C61S N107A R136V",4
"lib1","SARS-CoV-2","TAGATCATAATGTACG",1,31.6,6,-4.76,2,1.5,1.11,0.05,">1 nonsynonymous","K48G F99A",2
"lib1","SARS-CoV-2","TAGATCATATTACCAT",3,12.73,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6R Y91W D98L S139L P161M",5
"lib1","SARS-CoV-2","TAGATCATGGCCAAGT",6,81.35,10.21,-0.55,0.05,2.83,1,0,">1 nonsynonymous","V32E D98W",2
"lib1","SARS-CoV-2","TAGATCCATTCAAGGT",2,12.81,6.4,-4.37,0.7,1.5,1.13,0.04,">1 nonsynonymous","Y93K G116A",2
"lib1","SARS-CoV-2","TAGATCCCAAACTTTA",1,25.72,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","E10R D90I G146R P161S",4
"lib1","SARS-CoV-2","TAGATCCCATTTATCA",3,17.72,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","L5R F99P Y121G S129A E141K",5
"lib1","SARS-CoV-2","TAGATCCGGACCTGAG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","L60P P96C D112K K198*",4
"lib1","SARS-CoV-2","TAGATCCGTTGTTGGC",3,17.87,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9A W23V N118A R179A",4
"lib1","SARS-CoV-2","TAGATCCGTTTTTGTT",2,21.67,6,-4.76,2,3,1.18,0,">1 nonsynonymous","P96R A105E",2
"lib1","SARS-CoV-2","TAGATCCTAACATACT",4,27.42,9.3,-1.47,0.25,1.68,1.19,0.03,">1 nonsynonymous","I2T A33D F62S Y91L",4
"lib1","SARS-CoV-2","TAGATCCTGAATTTCC",2,17.02,8.51,-2.26,0.16,2.28,1.11,0.01,">1 nonsynonymous","N24S D59V G146E",3
"lib1","SARS-CoV-2","TAGATCGAAATTAACT",1,5.86,NA,NA,NA,NA,NA,NA,"stop","D112T T140* G146N Y165P P169H",5
"lib1","SARS-CoV-2","TAGATCGCCTGTACAA",7,73.81,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N40S T63R N92F R127P K132Q",5
"lib1","SARS-CoV-2","TAGATCGGATATGTAA",1,32.51,10.04,-0.72,0.11,2.19,1.04,0.01,">1 nonsynonymous","C6K R27T",2
"lib1","SARS-CoV-2","TAGATCGGCATATTTT",2,72.35,10.17,-0.59,0.09,2.58,1.03,0,">1 nonsynonymous","S41M S45F T201C",3
"lib1","SARS-CoV-2","TAGATCGTTCCGTTAT",9,83.22,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K56R D90R D137R Y165T",4
"lib1","SARS-CoV-2","TAGATCTAAAAGTAAA",1,17.39,6,-4.76,2,3,1.42,0.01,">1 nonsynonymous","N92S F99R",2
"lib1","SARS-CoV-2","TAGATCTACGCCTTAA",3,17.65,6,-4.76,0.93,3,1.16,0,">1 nonsynonymous","G9C F17N P54C E135D",4
"lib1","SARS-CoV-2","TAGATCTACTTTGATT",2,62.29,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N40D K56S P82L V103A Q176S",5
"lib1","SARS-CoV-2","TAGATCTAGCAAACTT",2,1.07,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","TAGATCTATCTATATG",5,165.45,10.73,-0.03,0.05,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATCTTCCAGCATG",5,90.12,9.41,-1.36,0.14,1.93,1.18,0.01,">1 nonsynonymous","F99Y E141R E154L T201G",4
"lib1","SARS-CoV-2","TAGATCTTCTAAAAAC",5,126.24,10.21,-0.55,0.06,2.74,1.02,0,">1 nonsynonymous","F44P Y66N",2
"lib1","SARS-CoV-2","TAGATGAACTTTCCAT",5,6.38,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N13R P96F R127C",3
"lib1","SARS-CoV-2","TAGATGACTGAGTTTT",3,35.06,6.01,-4.75,2,1.5,1.23,0.07,">1 nonsynonymous","K56L D68A F126H",3
"lib1","SARS-CoV-2","TAGATGAGTGAACTCT",5,69.46,10.78,0.01,0.07,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATGAGTGAGAAAA",5,109.16,8.74,-2.02,0.09,2.71,1.12,0,">1 nonsynonymous","K26L D90L Y119S",3
"lib1","SARS-CoV-2","TAGATGATAAGACGTA",6,48.54,10.58,-0.18,0.07,2.89,1.08,0,"1 nonsynonymous","S200Q",1
"lib1","SARS-CoV-2","TAGATGATCTTTGTGT",2,81.15,9.79,-0.98,0.05,2.83,1.01,0,">1 nonsynonymous","A42N T170K",2
"lib1","SARS-CoV-2","TAGATGATGACCCCGT",8,64.58,9.61,-1.16,0.15,1.94,1.13,0.01,">1 nonsynonymous","G86D T100F",2
"lib1","SARS-CoV-2","TAGATGATGTTAAATT",5,90.14,9.37,-1.39,0.13,2.22,1.14,0.01,">1 nonsynonymous","N64L T100N P149H G155N",4
"lib1","SARS-CoV-2","TAGATGATTCGCGCTA",5,106.06,10.68,-0.08,0.06,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATGCAAATGCATG",1,53.73,8.64,-2.13,0.11,1.9,1.13,0.01,">1 nonsynonymous","T3G F160I Q176H",3
"lib1","SARS-CoV-2","TAGATGCACGAAAAAT",1,10.3,6.79,-3.97,0.37,1.5,1.12,0.03,">1 nonsynonymous","N24Q G86D W106S P149L T170S",5
"lib1","SARS-CoV-2","TAGATGCCACAGGGTA",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V V11L C102R D112L Y175M",5
"lib1","SARS-CoV-2","TAGATGCCCCCGATTT",1,19.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S43H C49F I104R N120T T148S G166F",6
"lib1","SARS-CoV-2","TAGATGCCTTAACGTG",1,42.27,10.12,-0.65,0.08,2.83,1,0,"1 nonsynonymous","C6Y",1
"lib1","SARS-CoV-2","TAGATGCTAAAATTCA",2,27.04,6.17,-4.59,0.44,1.5,1.11,0.01,">1 nonsynonymous","C6M F12Y R25N T63M G86W T148L",6
"lib1","SARS-CoV-2","TAGATGCTCAAAAGCA",13,1.32,NA,NA,NA,NA,NA,NA,"stop","V65* G116V",2
"lib1","SARS-CoV-2","TAGATGCTTTAAATAG",3,25.74,10.8,0.03,0.09,2.86,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATGGAGCTGTATC",7,109.37,10.66,-0.1,0.04,2.89,1.06,0,"1 nonsynonymous","S184N",1
"lib1","SARS-CoV-2","TAGATGGAGTAGCGCA",1,8.21,10.67,-0.1,0.2,2.78,1.06,0.02,"1 nonsynonymous","A42N",1
"lib1","SARS-CoV-2","TAGATGGATAGAATGT",7,106.27,10.49,-0.28,0.04,2.91,1.03,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","TAGATGGCACAAGCGC",1,34.93,10.61,-0.16,0.07,2.84,1.03,0,">1 nonsynonymous","C61N R73K A192F",3
"lib1","SARS-CoV-2","TAGATGGCTGGCCCTA",2,11.05,6.13,-4.63,1.44,1.5,1.24,0.08,">1 nonsynonymous","T3G G9W Y91S V103A N120Y Y143F G152N Q168E K199L",9
"lib1","SARS-CoV-2","TAGATGGTGAAAAGCC",3,33.51,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","P7F C49W R73Q D98Q",4
"lib1","SARS-CoV-2","TAGATGGTTAGACTTG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","E10V S36I C61L G86E R127I R136H E154* A192S",8
"lib1","SARS-CoV-2","TAGATGTATAAATCCT",2,17.27,10.38,-0.38,0.09,2.71,1.08,0.01,">1 nonsynonymous","T3Y Y39S N120L",3
"lib1","SARS-CoV-2","TAGATGTCCTACGAAG",4,41.65,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N107T Y119R F126T",3
"lib1","SARS-CoV-2","TAGATGTCTCAAACGT",2,32.58,9.93,-0.84,0.1,2,1.08,0,">1 nonsynonymous","E10W F44H",2
"lib1","SARS-CoV-2","TAGATGTGGACTAGAC",5,1.2,NA,NA,NA,NA,NA,NA,"stop","A14T Q84* R127I S147F Y159P G172E",6
"lib1","SARS-CoV-2","TAGATGTTACAATGCC",2,19.52,6,-4.76,1.21,3,1.18,0,">1 nonsynonymous","I28L Y35L T55G N107D R124D H189L",6
"lib1","SARS-CoV-2","TAGATGTTCGAGGCAT",3,39.19,10.75,-0.02,0.09,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATTAAAAATATAA",3,35.95,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L5C V37T T46G I80M N120V",5
"lib1","SARS-CoV-2","TAGATTAAACAACAAA",2,20.07,6,-4.76,2,2.64,1.25,0.01,"1 nonsynonymous","Y159S",1
"lib1","SARS-CoV-2","TAGATTAAACAATTTG",1,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Y V37Y T100K S139C C158L",5
"lib1","SARS-CoV-2","TAGATTAACCGCTTTG",8,169.2,10.83,0.07,0.08,2.89,1.07,0,">1 nonsynonymous","T55S L122T",2
"lib1","SARS-CoV-2","TAGATTAAGCCACAAG",6,100.22,9.44,-1.32,0.17,1.82,1.11,0.01,">1 nonsynonymous","S43C F62P S139F",3
"lib1","SARS-CoV-2","TAGATTAATGATGCAT",3,53.05,6.7,-4.06,0.63,1.5,1.28,0.04,">1 nonsynonymous","T63G N92S S113L Y119S",4
"lib1","SARS-CoV-2","TAGATTACGTGTGAAC",4,39.46,9.15,-1.62,0.23,1.5,1.06,0.03,">1 nonsynonymous","S43C V52N S184M",3
"lib1","SARS-CoV-2","TAGATTACTAACGGCC",3,9.96,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","G86R A105W P149F",3
"lib1","SARS-CoV-2","TAGATTAGTAGCAGCG",1,9.21,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","D97L S108P C158K",3
"lib1","SARS-CoV-2","TAGATTATAAGTATGA",1,17.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13M N30S N58P N110V G146S L162D Y178A",7
"lib1","SARS-CoV-2","TAGATTATAATCCACA",1,36.95,10.86,0.09,0.07,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATTATAGTTTGCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N S113P T201V",3
"lib1","SARS-CoV-2","TAGATTATATTGACAT",10,69.61,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5R A18V F44S K56F P96L",5
"lib1","SARS-CoV-2","TAGATTATCCAGGGCC",10,24.4,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","A67L G83H G101S T170H",4
"lib1","SARS-CoV-2","TAGATTCACAGATTGT",2,38.03,10.75,-0.02,0.06,2.94,1.01,0,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","TAGATTCCGAGGAACC",4,132.76,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F62H I142R P177T",3
"lib1","SARS-CoV-2","TAGATTCGATTAGTAA",2,18.47,10.42,-0.34,0.09,2.97,1.01,0.01,">1 nonsynonymous","N1K E141Y",2
"lib1","SARS-CoV-2","TAGATTCTGGACAGAA",4,67.72,10.77,0,0.05,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATTCTGGTTATCA",6,127.86,10.69,-0.07,0.05,2.89,1.07,0,">1 nonsynonymous","T55S T201Y",2
"lib1","SARS-CoV-2","TAGATTGAAACCGAAT",7,32.84,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","S41R F99A K128G P149G",4
"lib1","SARS-CoV-2","TAGATTGACAACAGAA",8,80.47,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50A A89L I142K G172R P177N",5
"lib1","SARS-CoV-2","TAGATTGACTACACAA",2,51.52,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S45P D98M S129H R136Y",4
"lib1","SARS-CoV-2","TAGATTGAGAAATGCA",4,52.16,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","I2S A42G Y50P G116N P161S",5
"lib1","SARS-CoV-2","TAGATTGATAAGATAG",2,26.48,10.4,-0.37,0.07,2.85,1.01,0.01,">1 nonsynonymous","F160L P191F",2
"lib1","SARS-CoV-2","TAGATTGATAATATCG",1,14.86,10.77,0.01,0.1,3,1.03,0,">1 nonsynonymous","T3A D59A T201N",3
"lib1","SARS-CoV-2","TAGATTGGAAAGCTTA",12,208.32,7.22,-3.54,0.19,1.5,1.15,0.01,">1 nonsynonymous","L38G S41P L57H N107P",4
"lib1","SARS-CoV-2","TAGATTGGTTTACCCA",13,187.86,10.66,-0.11,0.05,2.88,1.09,0,">1 nonsynonymous","D97E K114W",2
"lib1","SARS-CoV-2","TAGATTGTAATCATAT",2,81.54,9.97,-0.8,0.07,2.79,1.01,0,">1 nonsynonymous","S41V G155C",2
"lib1","SARS-CoV-2","TAGATTGTTACAACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M S129N P149T",3
"lib1","SARS-CoV-2","TAGATTGTTGTTCAAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","Y93P T100* K114M R179I",4
"lib1","SARS-CoV-2","TAGATTTATAGCGGAT",7,82.6,8.93,-1.83,0.17,1.66,1.1,0.01,">1 nonsynonymous","F12R K56S V115N",3
"lib1","SARS-CoV-2","TAGATTTCACTTAGTA",2,5.37,10.98,0.21,0.11,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGATTTCGGGGGAAG",2,8.34,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","S69E Y91G A105G G146N",4
"lib1","SARS-CoV-2","TAGATTTGAACGACGT",1,12.93,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","N64I W106T N118V L131S I142Y H189P",6
"lib1","SARS-CoV-2","TAGATTTGCTGATATC",2,37.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6I F12K T55H G117R R124P P161T T201D",7
"lib1","SARS-CoV-2","TAGATTTGCTTAAGGT",4,32.16,6,-4.76,2,3,1.15,0,"1 nonsynonymous","R179W",1
"lib1","SARS-CoV-2","TAGATTTGTGCGACAT",1,43.31,10.52,-0.24,0.08,2.87,1.08,0,">1 nonsynonymous","N1T A81S",2
"lib1","SARS-CoV-2","TAGATTTTAAGCAGTC",6,39.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56L L131K",2
"lib1","SARS-CoV-2","TAGATTTTAAGTCGAT",3,4.59,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAGCAAAAAGTACATG",9,74.72,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K26S G51C F62D V103L D112Q N151P",6
"lib1","SARS-CoV-2","TAGCAAAAATACAGAA",8,6.96,NA,NA,NA,NA,NA,NA,"stop","D68* Y175H",2
"lib1","SARS-CoV-2","TAGCAAAAATCCACCG",1,30.85,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G51V D98V L122F P169C",4
"lib1","SARS-CoV-2","TAGCAAAAGGTAACAG",1,14.29,9.78,-0.99,0.11,2.09,1.01,0.01,"1 nonsynonymous","F8H",1
"lib1","SARS-CoV-2","TAGCAAAATCCTTTCA",2,27.71,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","T15L V20W N40S",3
"lib1","SARS-CoV-2","TAGCAAAATTGATACC",2,2.51,NA,NA,NA,NA,NA,NA,"stop","T15K N120* G152N Q163A V173G",5
"lib1","SARS-CoV-2","TAGCAAACCTCTAAAC",1,27.87,10.53,-0.24,0.42,1.5,1,0.06,"1 nonsynonymous","D68E",1
"lib1","SARS-CoV-2","TAGCAAAGATTTGAGT",3,2.75,NA,NA,NA,NA,NA,NA,"stop","A22P S29M V71* A105K F185C",5
"lib1","SARS-CoV-2","TAGCAAAGTAGTATTG",6,111.15,10.02,-0.75,0.12,2.41,1.04,0,">1 nonsynonymous","Y123T N130Y",2
"lib1","SARS-CoV-2","TAGCAACAAAGTATAA",2,42.03,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","C6I Y39M G86F G166S",4
"lib1","SARS-CoV-2","TAGCAACAGCGTTTAG",7,80.48,10.19,-0.58,0.06,2.86,1.04,0,">1 nonsynonymous","G83S S139R",2
"lib1","SARS-CoV-2","TAGCAACCAGAACCCC",2,70.39,9.04,-1.73,0.26,1.5,1.12,0.03,">1 nonsynonymous","A81R G86K P197L",3
"lib1","SARS-CoV-2","TAGCAACCGCAAGATC",1,5.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44L D68S",2
"lib1","SARS-CoV-2","TAGCAACCTGTGAGTC",4,54.54,10.48,-0.28,0.05,2.91,1.05,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TAGCAACGAAACAATC",7,50.29,7.1,-3.66,0.24,1.5,1.11,0.02,">1 nonsynonymous","S45Y D112L N151S",3
"lib1","SARS-CoV-2","TAGCAACGAAGCACGC",6,84.92,10.13,-0.63,0.03,2.95,1,0,">1 nonsynonymous","K114C N151K F156S Y178H",4
"lib1","SARS-CoV-2","TAGCAACGTAGCCTTC",7,94.32,9.95,-0.81,0.08,2.73,1.03,0,"1 nonsynonymous","P161G",1
"lib1","SARS-CoV-2","TAGCAACTAAATAACA",2,46.34,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S19K D97I N107V",3
"lib1","SARS-CoV-2","TAGCAACTAATAAAAC",2,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L A81E F99S",3
"lib1","SARS-CoV-2","TAGCAACTACCGATCA",1,3.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S45C",1
"lib1","SARS-CoV-2","TAGCAACTCCTCGGTA",5,94.25,10.02,-0.74,0.07,2.16,1.03,0,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","TAGCAACTGAGACCCA",5,2.29,NA,NA,NA,NA,NA,NA,"stop","D59S Y119L T201*",3
"lib1","SARS-CoV-2","TAGCAACTGTAAGCCT",2,7.96,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90R N107M G117R N157A",4
"lib1","SARS-CoV-2","TAGCAAGATTTAGATG",7,136.07,10.75,-0.01,0.07,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCAAGCAAAATAGA",2,35.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N157Y Q176M",2
"lib1","SARS-CoV-2","TAGCAAGCATTATATA",3,0.18,NA,NA,NA,NA,NA,NA,"stop","A14K K199*",2
"lib1","SARS-CoV-2","TAGCAAGGGCAGATAA",3,61.55,10.76,0,0.08,2.97,1,0,">1 nonsynonymous","K56H T201V",2
"lib1","SARS-CoV-2","TAGCAAGGTAAAAGGC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","S36G F156*",2
"lib1","SARS-CoV-2","TAGCAAGGTAGTGCAC",9,64.13,6.1,-4.66,0.91,1.5,1.14,0.02,">1 nonsynonymous","A14F C61K F99W I138T N151S L162K",6
"lib1","SARS-CoV-2","TAGCAAGTAAATAATT",6,39.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R25E I88L L122G L162G",4
"lib1","SARS-CoV-2","TAGCAAGTGACACAAC",21,200.23,8.63,-2.13,0.28,1.5,1,0.04,">1 nonsynonymous","Y66W P82G D90N",3
"lib1","SARS-CoV-2","TAGCAATGAGCTCCTT",5,19.82,7.45,-3.32,0.25,1.64,1.19,0.01,">1 nonsynonymous","N64M F99L G117H F156H P197V",5
"lib1","SARS-CoV-2","TAGCAATGGGAGGGTA",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A Y50H K56Y D90C",4
"lib1","SARS-CoV-2","TAGCAATTCGTCGCAA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I N13T Y143Q",3
"lib1","SARS-CoV-2","TAGCAATTGAGAAAAA",1,33.05,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L95C F126T R136G",3
"lib1","SARS-CoV-2","TAGCACAAATCATGAC",2,9.61,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","E141S F167R",2
"lib1","SARS-CoV-2","TAGCACAAATGCGTTT",13,264.66,9.27,-1.5,0.11,1.72,1.09,0,"1 nonsynonymous","R25E",1
"lib1","SARS-CoV-2","TAGCACACTCATTTGC",4,51.04,10.66,-0.11,0.06,2.92,1.02,0,">1 nonsynonymous","Y66N G155A",2
"lib1","SARS-CoV-2","TAGCACACTGTTTTTA",3,1.57,NA,NA,NA,NA,NA,NA,"stop","A18*",1
"lib1","SARS-CoV-2","TAGCACAGATACCCCG",4,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L G51F",2
"lib1","SARS-CoV-2","TAGCACATACTAGGTG",13,96.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14G R127L Y159S",3
"lib1","SARS-CoV-2","TAGCACATCCAAATAC",3,0.5,NA,NA,NA,NA,NA,NA,"stop","A42S A89N Y175*",3
"lib1","SARS-CoV-2","TAGCACATCCAGCCAG",3,111.05,10.35,-0.42,0.07,2.84,1.01,0,">1 nonsynonymous","F134C V153A T201M",3
"lib1","SARS-CoV-2","TAGCACATGAAACGTG",7,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G P177L",2
"lib1","SARS-CoV-2","TAGCACATTAAGATGA",2,69.76,10.76,0,0.06,2.94,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCACATTACAGGTC",4,37.34,10.74,-0.02,0.07,2.98,1,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","TAGCACATTCCGGACA",3,18.33,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S147N T170L Y175P",3
"lib1","SARS-CoV-2","TAGCACATTGGACCAA",3,46.86,10.64,-0.12,0.05,2.96,1.02,0,"1 nonsynonymous","D97E",1
"lib1","SARS-CoV-2","TAGCACATTTAATGGA",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N157H F167L",2
"lib1","SARS-CoV-2","TAGCACATTTATAAAT",7,79.05,9.31,-1.46,0.07,2.72,1.11,0,">1 nonsynonymous","L5S K87M P96G D98N G174L",5
"lib1","SARS-CoV-2","TAGCACATTTCGCTTA",2,19.56,7.88,-2.89,0.38,1.5,1,0.05,">1 nonsynonymous","A18P K87C D90Q R127T S200I",5
"lib1","SARS-CoV-2","TAGCACCAAAGAAGTC",1,17.09,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","E10L F99S",2
"lib1","SARS-CoV-2","TAGCACCAACTAGATA",4,22.71,6,-4.76,2,3,1.14,0,">1 nonsynonymous","F167Y V181R",2
"lib1","SARS-CoV-2","TAGCACCACAATACCG",6,32.59,6,-4.76,2,3,1.37,0.01,">1 nonsynonymous","C6T K87G I104L K114S N118L F160K K199E",7
"lib1","SARS-CoV-2","TAGCACCCACCAAACT",4,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D97L W106S G116K Q144I G174H",6
"lib1","SARS-CoV-2","TAGCACCCCGGTGGTT",6,85.73,7.73,-3.03,0.27,1.5,1.17,0.02,">1 nonsynonymous","T55L S113G Y119G V173S",4
"lib1","SARS-CoV-2","TAGCACCCGCAAGTGG",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S Y66N D90C",3
"lib1","SARS-CoV-2","TAGCACCCTGACATCT",3,28.45,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37S A81P K94P",3
"lib1","SARS-CoV-2","TAGCACCTATCTCCCA",2,10.01,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","N13S Y50T",2
"lib1","SARS-CoV-2","TAGCACCTTAACTTAG",3,13.98,10.79,0.03,0.05,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCACGGATGAGGCT",1,100.08,10.65,-0.11,0.05,2.89,1.06,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","TAGCACGGGTATCTGT",4,100.15,10.72,-0.05,0.05,2.9,1.04,0,"1 nonsynonymous","S139E",1
"lib1","SARS-CoV-2","TAGCACTAGAGTCCAG",13,71.51,6.02,-4.75,0.89,1.5,1.17,0.01,">1 nonsynonymous","L5D A14F K48C G146A",4
"lib1","SARS-CoV-2","TAGCACTAGCAGAGAT",2,49.11,10.71,-0.06,0.04,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCACTATTATGTTA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","L38K N64Y P82* G83C K94*",5
"lib1","SARS-CoV-2","TAGCACTCCGGCCCGA",3,48.18,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","P82T K87C R124A D137L C158L G196K",6
"lib1","SARS-CoV-2","TAGCACTCTACCAATC",1,52.91,10.82,0.06,0.08,2.94,1.04,0,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","TAGCACTGTCCCGAAA",2,13.62,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41Q V103K G146A",3
"lib1","SARS-CoV-2","TAGCAGAAAGTTATTT",5,17.45,10.71,-0.06,0.05,2.88,1.07,0,"1 nonsynonymous","R16C",1
"lib1","SARS-CoV-2","TAGCAGAACATAAGTT",4,17.96,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C49V G86W D90Q K114G T170G K198D",6
"lib1","SARS-CoV-2","TAGCAGAATCCAAACG",4,76.58,10.7,-0.06,0.07,2.86,1.09,0,"1 nonsynonymous","Q84R",1
"lib1","SARS-CoV-2","TAGCAGAGTCCACAAC",3,41.82,7.68,-3.08,0.33,1.5,1.07,0.04,">1 nonsynonymous","S19M T85L D97S",3
"lib1","SARS-CoV-2","TAGCAGATATTCCTTG",4,27.59,6.01,-4.76,1.32,1.5,1.18,0.03,">1 nonsynonymous","Y119A C158F",2
"lib1","SARS-CoV-2","TAGCAGATCTTTCACC",4,42.76,10.01,-0.75,0.06,2.74,1,0,">1 nonsynonymous","V52T G83E",2
"lib1","SARS-CoV-2","TAGCAGCAGCGACCTG",3,7.36,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","R127F Y143I G174L",3
"lib1","SARS-CoV-2","TAGCAGCCGAACTCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C31Q N40V S53* N64C I104R",5
"lib1","SARS-CoV-2","TAGCAGCGCGGGTTCG",4,70.32,6,-4.76,2,3,1.22,0,">1 nonsynonymous","G86V I142L",2
"lib1","SARS-CoV-2","TAGCAGCGGCTATAGA",4,58.72,10.1,-0.67,0.05,2.72,1.02,0,">1 nonsynonymous","D98A E186Y",2
"lib1","SARS-CoV-2","TAGCAGGATTAGTAAT",5,49.96,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","T46R F62S Y121T T140Q",4
"lib1","SARS-CoV-2","TAGCAGGCCCTCAGCC",2,39.17,10.18,-0.58,0.11,2.65,1,0.01,">1 nonsynonymous","P149F Y178V",2
"lib1","SARS-CoV-2","TAGCAGGGGGCGTGAA",3,43.28,6.42,-4.35,0.36,1.5,1.13,0.01,">1 nonsynonymous","N30S Y50A",2
"lib1","SARS-CoV-2","TAGCAGGGGTTTGTCT",7,73.55,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","TAGCAGGGTAAAACGT",2,31.1,8.09,-2.67,0.25,1.56,1.16,0.02,">1 nonsynonymous","C6V T140R F160I P169R",4
"lib1","SARS-CoV-2","TAGCAGGGTCTTAATC",2,10.82,10.73,-0.03,0.04,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCAGGTTATGGGAA",2,17.55,6.18,-4.59,0.9,1.5,1.18,0.03,">1 nonsynonymous","D59C G86Y",2
"lib1","SARS-CoV-2","TAGCAGGTTTGCAACT",5,36.59,10.03,-0.73,0.12,2.01,1.08,0,">1 nonsynonymous","P7G E135I",2
"lib1","SARS-CoV-2","TAGCAGTTAAACTTCC",5,0.32,NA,NA,NA,NA,NA,NA,"stop","D98V D137N K199*",3
"lib1","SARS-CoV-2","TAGCAGTTAGCGACAG",4,19.44,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A22E A81I D98Y V103S N130K F156S",6
"lib1","SARS-CoV-2","TAGCAGTTGCCGGAAG",3,10.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43I P96T N107T G116E T148S",5
"lib1","SARS-CoV-2","TAGCATAAACGTACCA",3,21.49,9.73,-1.03,0.34,1.5,1.08,0.05,">1 nonsynonymous","I28R D97W",2
"lib1","SARS-CoV-2","TAGCATAAAGTTACTC",1,50.77,10.76,-0.01,0.09,2.82,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCATAACATGGCCG",6,131.25,8.52,-2.24,0.09,2.92,1.05,0,"1 nonsynonymous","N157K",1
"lib1","SARS-CoV-2","TAGCATAACTACTTTT",6,94.68,10.34,-0.43,0.06,2.78,1,0,">1 nonsynonymous","R16S R136A",2
"lib1","SARS-CoV-2","TAGCATACAAAGTCAG",2,18.48,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y50D L95P P177S L183F",4
"lib1","SARS-CoV-2","TAGCATACGACAAAGT",3,55.47,10.74,-0.02,0.09,2.92,1,0,"1 nonsynonymous","N151A",1
"lib1","SARS-CoV-2","TAGCATAGTAGCAAGA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","T46L P54I L95* N120S G146T V173L",6
"lib1","SARS-CoV-2","TAGCATATATCGCTAA",12,1.02,NA,NA,NA,NA,NA,NA,"stop","N64A T85V D97L V182*",4
"lib1","SARS-CoV-2","TAGCATCACCCGCTGT",2,6.68,6,-4.76,1.16,3,1.08,0.01,">1 nonsynonymous","A89I V103L E135D",3
"lib1","SARS-CoV-2","TAGCATCAGACAAATT",10,203.6,10.83,0.07,0.07,2.9,1.05,0,"1 nonsynonymous","N1Q",1
"lib1","SARS-CoV-2","TAGCATGAGAAATTAA",4,5.95,NA,NA,NA,NA,NA,NA,"stop","P96T C102* P177K",3
"lib1","SARS-CoV-2","TAGCATGATGGCCCGA",1,18.66,6,-4.76,2,3,1.05,0,">1 nonsynonymous","S113P Y143L",2
"lib1","SARS-CoV-2","TAGCATTAATGCGACC",2,12.56,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I2A N58T L95I G117R F134I",5
"lib1","SARS-CoV-2","TAGCATTCCACCTCTG",2,30.55,10.72,-0.05,0.04,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCATTCCCGATGTT",4,19.12,10.46,-0.3,0.13,2.85,1.09,0.01,"1 nonsynonymous","P133G",1
"lib1","SARS-CoV-2","TAGCATTTCGGCTCCA",2,33.97,10.18,-0.59,0.05,2.88,1.03,0,">1 nonsynonymous","N40S F62C N120T N171Y",4
"lib1","SARS-CoV-2","TAGCATTTTCAGGCAT",3,3.45,NA,NA,NA,NA,NA,NA,"stop","G74A Y123* F167R",3
"lib1","SARS-CoV-2","TAGCATTTTGAACATT",4,21.27,9.21,-1.56,0.34,1.5,1,0.05,">1 nonsynonymous","P82I D98F",2
"lib1","SARS-CoV-2","TAGCATTTTTACTAAC",7,38.14,9.83,-0.93,0.13,2.1,1.07,0.01,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","TAGCCAAAAGAAACTA",1,31.19,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T63I V103F Y119T",3
"lib1","SARS-CoV-2","TAGCCAAAAGATGATA",1,63.82,7.73,-3.03,0.1,2,1.13,0,">1 nonsynonymous","A145S Y175L",2
"lib1","SARS-CoV-2","TAGCCAAACACTCATT",4,32.71,10.72,-0.05,0.13,2.73,1.13,0.01,">1 nonsynonymous","T3R K128R",2
"lib1","SARS-CoV-2","TAGCCAAACCAGGTTG",5,38.92,10.72,-0.05,0.09,2.77,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCCAAACTCAATGG",6,51.8,9.13,-1.63,0.19,1.51,1.13,0.02,">1 nonsynonymous","F12S V115M",2
"lib1","SARS-CoV-2","TAGCCAAATAAGAAAG",3,36.66,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S53F N109T C158R K199W",4
"lib1","SARS-CoV-2","TAGCCAAATCATGCCT",8,25.42,6,-4.76,2,3,1.23,0,">1 nonsynonymous","S43T G86S R136W A145L",4
"lib1","SARS-CoV-2","TAGCCAACCCGTTTTA",6,32.75,6,-4.76,0.5,3,1.1,0,">1 nonsynonymous","S41H Y91P I142H L162T",4
"lib1","SARS-CoV-2","TAGCCAACTAATCGAG",1,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","TAGCCAAGGCAAATGC",2,64.14,10.64,-0.13,0.04,2.94,1.01,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","TAGCCAAGTCTACTAG",1,7.36,6.96,-3.8,0.84,1.5,1.21,0.05,">1 nonsynonymous","N13C L60E R78A F99H G174R",5
"lib1","SARS-CoV-2","TAGCCAAGTGTCATAT",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F F47A T85L",3
"lib1","SARS-CoV-2","TAGCCAATGATACACA",3,26.65,10.67,-0.09,0.12,2.87,1.12,0.01,"1 nonsynonymous","S147G",1
"lib1","SARS-CoV-2","TAGCCACAACATAGCG",3,2.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183R",1
"lib1","SARS-CoV-2","TAGCCACCAGGTAGAC",10,81.58,6,-4.76,1.07,1.5,1.15,0.02,">1 nonsynonymous","S41E G101Y",2
"lib1","SARS-CoV-2","TAGCCACTAACGAGAA",2,34.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R V173T",2
"lib1","SARS-CoV-2","TAGCCACTAATGTCGG",2,8.61,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V77W G86V",2
"lib1","SARS-CoV-2","TAGCCAGAAACGTCCT",3,11.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F99H C158N",2
"lib1","SARS-CoV-2","TAGCCAGACTTCAACA",1,13.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W106M N107K D112Q S200Y",4
"lib1","SARS-CoV-2","TAGCCAGCAAGTACGT",1,47.07,6.98,-3.78,0.31,1.5,1.14,0.02,">1 nonsynonymous","G117T F134E F160G",3
"lib1","SARS-CoV-2","TAGCCAGGATAATAGG",1,19.66,10.65,-0.12,0.08,2.91,1.09,0,">1 nonsynonymous","V37L F134M",2
"lib1","SARS-CoV-2","TAGCCAGTGAAGCTTG",5,20.81,6.09,-4.67,0.61,1.5,1.15,0.01,">1 nonsynonymous","I88M K94Q Q144R E154K F160C G166T",6
"lib1","SARS-CoV-2","TAGCCAGTGGACACAT",4,48.57,10.6,-0.17,0.06,2.83,1.09,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","TAGCCATAACAATTCA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","T3V I28V L60* N109K L183P",5
"lib1","SARS-CoV-2","TAGCCATAACTCCATA",4,44.9,7.33,-3.43,0.24,1.5,1.07,0.02,">1 nonsynonymous","A81T N118I A192S S200N",4
"lib1","SARS-CoV-2","TAGCCATATGTCAATC",3,128.25,10.77,0,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCCATCCAAACCTA",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K F160I",2
"lib1","SARS-CoV-2","TAGCCATCCACTCCCA",11,128.34,10.69,-0.08,0.05,2.9,1.05,0,"1 nonsynonymous","N40D",1
"lib1","SARS-CoV-2","TAGCCATCTGTCTGTG",1,7.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34G L95Y Y165I",3
"lib1","SARS-CoV-2","TAGCCCAACCAGGCAG",5,95.72,10.27,-0.5,0.04,2.83,1.05,0,">1 nonsynonymous","R27M P149W",2
"lib1","SARS-CoV-2","TAGCCCAATCATTCAA",6,39.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T55I F62R D98R A105I Y121P",5
"lib1","SARS-CoV-2","TAGCCCACCAGATAAT",2,9.01,7.88,-2.88,0.73,1.81,1.05,0.06,">1 nonsynonymous","G9R T15G A42G C61P G83L Y119I Q163K",7
"lib1","SARS-CoV-2","TAGCCCACGACAGCCA",5,174.72,10.72,-0.05,0.07,2.89,1.07,0,">1 nonsynonymous","T15V L122Q",2
"lib1","SARS-CoV-2","TAGCCCACTTCAAAAG",5,6.08,6.65,-4.12,0.44,1.5,1.18,0.02,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","TAGCCCATGGGAATCG",3,27.05,10.49,-0.28,0.09,2.91,1.05,0,">1 nonsynonymous","I2L E10P",2
"lib1","SARS-CoV-2","TAGCCCATGTTATGAG",1,24.11,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","N4D R16L I28T T46D L60V N107C Y119L P149W S184G",9
"lib1","SARS-CoV-2","TAGCCCATTCGTTTAC",2,10.46,6,-4.76,2,2.9,1.02,0,">1 nonsynonymous","F12D I88S",2
"lib1","SARS-CoV-2","TAGCCCCTGAAGGATA",3,90.6,10.58,-0.19,0.09,2.72,1.16,0,"1 nonsynonymous","D98R",1
"lib1","SARS-CoV-2","TAGCCCGACTTCCTCG",2,81.4,10.86,0.1,0.08,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCCCGCGTCACATG",2,5.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S Q144M G155V S184C",4
"lib1","SARS-CoV-2","TAGCCCGCTGTTATAA",6,158.98,10.71,-0.06,0.05,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCCCTATGAGCCCA",4,104.37,9.62,-1.15,0.05,2.83,1.08,0,"1 nonsynonymous","G117A",1
"lib1","SARS-CoV-2","TAGCCCTTTTTACGGA",6,0.62,NA,NA,NA,NA,NA,NA,"stop","P54R F62* I142G K199H",4
"lib1","SARS-CoV-2","TAGCCGAAAAACCGAA",1,19.48,9.16,-1.6,0.12,2.44,1.12,0.01,">1 nonsynonymous","E141V A145L",2
"lib1","SARS-CoV-2","TAGCCGAAGCAAGGAG",4,26.12,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","V77F L122P P149W Y165R",4
"lib1","SARS-CoV-2","TAGCCGATAATTAACC",4,20.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V20K K94N C150W",3
"lib1","SARS-CoV-2","TAGCCGATGAAAACTG",7,105.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5C Y35E T85M Y143S",4
"lib1","SARS-CoV-2","TAGCCGCCAACAGAGA",1,11.16,9.71,-1.05,0.2,2.23,1.08,0.01,">1 nonsynonymous","R27L I88M",2
"lib1","SARS-CoV-2","TAGCCGCTACTGAATA",8,76.2,10.35,-0.42,0.07,2.95,1,0,">1 nonsynonymous","N24V K87I",2
"lib1","SARS-CoV-2","TAGCCGGAGCTTCCCA",5,47.35,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N1Y K114E Y121W F156V F167L",5
"lib1","SARS-CoV-2","TAGCCGGTAACGCTAC",3,74.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N107T G166P",2
"lib1","SARS-CoV-2","TAGCCTAAGGCGATCT",2,19.1,9.98,-0.78,0.08,2.77,1.01,0,"1 nonsynonymous","Y91A",1
"lib1","SARS-CoV-2","TAGCCTAATATAGACT",1,14.49,10.04,-0.72,0.18,2.4,1.08,0.01,">1 nonsynonymous","G9S P133I",2
"lib1","SARS-CoV-2","TAGCCTACACCCTAAC",12,186.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S45V Y119S N151D Q176L",4
"lib1","SARS-CoV-2","TAGCCTACAGAAACTG",8,90.06,10.11,-0.66,0.08,2.28,1.01,0,">1 nonsynonymous","V37N A89H",2
"lib1","SARS-CoV-2","TAGCCTACCATAAAAT",2,16.23,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F62Y D98E D112S S129I E141M G155F",6
"lib1","SARS-CoV-2","TAGCCTACTAAAAAAC",3,37.85,8.49,-2.27,0.21,2.07,1.16,0.02,">1 nonsynonymous","G51I G117N P197L",3
"lib1","SARS-CoV-2","TAGCCTACTATGACAC",1,33.39,9.86,-0.91,0.08,2.73,1.06,0,">1 nonsynonymous","S53R G152I",2
"lib1","SARS-CoV-2","TAGCCTACTCCCAACA",1,9.19,9.41,-1.35,0.26,2.37,1.22,0.05,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","TAGCCTATAAGAGACT",4,48.27,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V77K R127D",2
"lib1","SARS-CoV-2","TAGCCTCAACGTTTCG",3,24.65,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D98G Y165R G172I S184Q",4
"lib1","SARS-CoV-2","TAGCCTCATAAATAAA",13,175.92,10.76,0,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCCTCTAATCTAAC",1,15.81,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","T3I K114Q T170F Y178P",4
"lib1","SARS-CoV-2","TAGCCTGAATAACCTT",1,36.73,9.58,-1.18,0.14,1.81,1.07,0.01,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","TAGCCTGATTGTACCC",7,121.76,10.66,-0.1,0.05,2.9,1.06,0,">1 nonsynonymous","T63Y V115I",2
"lib1","SARS-CoV-2","TAGCCTGCACTGGTAA",5,33.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G101W V181A",2
"lib1","SARS-CoV-2","TAGCCTGGTCAAAAAC",2,3.02,NA,NA,NA,NA,NA,NA,"stop","L162* Y178P",2
"lib1","SARS-CoV-2","TAGCCTTCACCGGCAA",4,1.34,NA,NA,NA,NA,NA,NA,"stop","Q176L K199*",2
"lib1","SARS-CoV-2","TAGCCTTGCTACCGGG",6,26.87,8.37,-2.4,0.21,2.17,1.09,0.02,">1 nonsynonymous","A42N K48N N157R",3
"lib1","SARS-CoV-2","TAGCCTTTATACCTTG",4,28.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86L P96R K114Q L122M I138M",5
"lib1","SARS-CoV-2","TAGCGAAACAAGGCCT",1,15.66,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V77A G117I R136M",3
"lib1","SARS-CoV-2","TAGCGAAACTTAGGTA",3,46.63,10.51,-0.25,0.07,2.9,1,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","TAGCGAACGTTGTTGA",2,88.91,10.23,-0.53,0.05,2.91,1.05,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","TAGCGAACTCCTACAT",4,36.43,9.16,-1.6,0.14,1.95,1.11,0.01,">1 nonsynonymous","F17S C61L",2
"lib1","SARS-CoV-2","TAGCGAAGAAATTTTA",4,53.82,9.94,-0.83,0.1,2.09,1.07,0,">1 nonsynonymous","Y39N V77R F134Y",3
"lib1","SARS-CoV-2","TAGCGAAGTATGGGTA",3,68.5,10.74,-0.03,0.06,2.88,1.09,0,">1 nonsynonymous","V37A S43Y",2
"lib1","SARS-CoV-2","TAGCGACCATCACTAA",4,49.15,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N1I N40Q C49V G83A Q176S",5
"lib1","SARS-CoV-2","TAGCGACCCTCGGTAG",4,81.67,10.64,-0.12,0.03,2.96,1,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","TAGCGACTGAATGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","R16N K26M Y91N N107D V153*",5
"lib1","SARS-CoV-2","TAGCGAGACTGGAATT",2,28.35,10.59,-0.17,0.09,2.86,1.08,0,"1 nonsynonymous","T148R",1
"lib1","SARS-CoV-2","TAGCGAGCCTTGAGTG",1,13.91,10.81,0.05,0.18,2.91,1,0.01,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","TAGCGAGTACCGCAAA",1,5.04,10.66,-0.1,0.15,2.89,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGCGATAAAACGCAG",2,23.61,8.36,-2.4,0.26,1.5,1.18,0.03,"1 nonsynonymous","D137M",1
"lib1","SARS-CoV-2","TAGCGATAGTCACAAA",5,149.11,10.18,-0.58,0.05,2.69,1.02,0,"1 nonsynonymous","G51E",1
"lib1","SARS-CoV-2","TAGCGATCAAAGCATC",5,42.59,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","A22H V77A G101P R179V",4
"lib1","SARS-CoV-2","TAGCGATTGAATCCAA",4,41.13,10.8,0.03,0.09,2.83,1.05,0,">1 nonsynonymous","Y35L L95I T140S",3
"lib1","SARS-CoV-2","TAGCGCACGGACCAGG",4,25.59,8.78,-1.98,0.33,1.5,1,0.06,"1 nonsynonymous","R25V",1
"lib1","SARS-CoV-2","TAGCGCATATTCAACT",2,15.66,10.09,-0.68,0.18,2.07,1.06,0.02,"1 nonsynonymous","V181A",1
"lib1","SARS-CoV-2","TAGCGCCATAACCGAG",2,97.18,10.28,-0.49,0.07,2.73,1.05,0,">1 nonsynonymous","A14S Y178N",2
"lib1","SARS-CoV-2","TAGCGCCGCCATTGCT",4,20.96,10.84,0.08,0.28,2.55,1.03,0.02,"1 nonsynonymous","L60Y",1
"lib1","SARS-CoV-2","TAGCGCCTCGATAACG",3,38.21,6.74,-4.03,0.45,1.5,1.08,0.03,">1 nonsynonymous","R25F D90A E154P",3
"lib1","SARS-CoV-2","TAGCGCCTGTCCCAAA",4,73.12,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G9E V32Q D59K E76K A105W S113E I142M",7
"lib1","SARS-CoV-2","TAGCGCGAAAACATCA",6,27.9,6.19,-4.58,0.84,1.5,1.24,0.02,">1 nonsynonymous","T15H C61S N107A R136V",4
"lib1","SARS-CoV-2","TAGCGCGAACCTTACT",2,41.29,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","D90V A105H A145C",3
"lib1","SARS-CoV-2","TAGCGCTATTATATAT",2,39.14,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S36L A42V S69G V71K E135S P161V",6
"lib1","SARS-CoV-2","TAGCGCTCCATTACAA",1,78.97,10.79,0.02,0.05,2.93,1.05,0,"1 nonsynonymous","R27D",1
"lib1","SARS-CoV-2","TAGCGCTTTGGAGACA",5,1054.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F44V G101S E141H Q176I V180D",5
"lib1","SARS-CoV-2","TAGCGGAAAGAGGCAA",10,67.21,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","F70K",1
"lib1","SARS-CoV-2","TAGCGGAAATCAGCCA",2,79.23,9.67,-1.09,0.1,2.04,1.1,0,">1 nonsynonymous","D34G A42T F62M E141N S184Y",5
"lib1","SARS-CoV-2","TAGCGGACATCCCAGC",6,28.58,7.3,-3.46,0.24,1.5,1.04,0.01,">1 nonsynonymous","F134P C195Q",2
"lib1","SARS-CoV-2","TAGCGGACGCTCATGA",1,19.9,10.16,-0.6,0.15,2.59,1.09,0.01,">1 nonsynonymous","G9F E135R V173L",3
"lib1","SARS-CoV-2","TAGCGGAGGCTATCAA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y G9R T15R Y35G T55I D90R G117F G146E G166H",9
"lib1","SARS-CoV-2","TAGCGGAGTTTAAAAA",2,33.2,10.42,-0.35,0.11,2.41,1.02,0.01,">1 nonsynonymous","F62R Q163C",2
"lib1","SARS-CoV-2","TAGCGGCAGGCAATAC",5,75.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M T55H L95S W106V F134L G166L",6
"lib1","SARS-CoV-2","TAGCGGCAGTTGAGAA",4,2.83,NA,NA,NA,NA,NA,NA,"stop","N64F L122* L183C",3
"lib1","SARS-CoV-2","TAGCGGCGTTAACGCC",6,224.47,9.94,-0.82,0.05,2.88,1.02,0,">1 nonsynonymous","K48V F156S",2
"lib1","SARS-CoV-2","TAGCGGCTAGCGCCAA",1,4.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12H",1
"lib1","SARS-CoV-2","TAGCGGGCCTTGGTGC",6,71.99,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10L K48V F62T P82L",4
"lib1","SARS-CoV-2","TAGCGGTACGCACCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100K L122I P177N",3
"lib1","SARS-CoV-2","TAGCGGTCCGCCTGCT",2,86.5,10.74,-0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCGGTCTAAAAGAT",1,5.59,NA,NA,NA,NA,NA,0.29,"1 nonsynonymous","L131D",1
"lib1","SARS-CoV-2","TAGCGGTTCCTTGAAG",8,4.9,NA,NA,NA,NA,NA,NA,"stop","S19K V32*",2
"lib1","SARS-CoV-2","TAGCGTACAAGGACAT",2,59.21,9.98,-0.79,0.08,2.34,1.07,0,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","TAGCGTACATTATCCT",3,6.69,NA,NA,NA,NA,NA,0.44,">1 nonsynonymous","C6T D98W S113R",3
"lib1","SARS-CoV-2","TAGCGTACCCTTATGA",4,49.12,8.92,-1.84,0.19,1.79,1.12,0.01,"1 nonsynonymous","L162W",1
"lib1","SARS-CoV-2","TAGCGTACGCGTGAGC",9,133.29,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V77I G86F A105T D112L",4
"lib1","SARS-CoV-2","TAGCGTATTTTTGTTT",2,189.26,8.64,-2.12,0.1,2.93,1.05,0,"1 nonsynonymous","F126A",1
"lib1","SARS-CoV-2","TAGCGTGAACACCAAT",3,0.55,NA,NA,NA,NA,NA,NA,"stop","C6I N107G I142D C150*",4
"lib1","SARS-CoV-2","TAGCGTGAACCCAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66A I88R F99S",3
"lib1","SARS-CoV-2","TAGCGTGAACCCAGTA",6,53.68,6,-4.76,1.96,1.5,1.18,0.02,">1 nonsynonymous","Y66A I88R F99S",3
"lib1","SARS-CoV-2","TAGCGTGAACCCGACA",2,92.7,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S29R A89V S129L V173S Y178F",5
"lib1","SARS-CoV-2","TAGCGTGTCAAATTGA",6,146.84,10.5,-0.27,0.03,2.91,1,0,">1 nonsynonymous","E10N I142M",2
"lib1","SARS-CoV-2","TAGCGTTAGAAAGAAA",10,122.68,10.83,0.06,0.07,2.87,1.07,0,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","TAGCGTTATCAAGTGA",6,19.05,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G74P Y91L D97S P169V",4
"lib1","SARS-CoV-2","TAGCGTTCTGCCATAT",2,43.85,8.94,-1.83,0.22,1.5,1.02,0.02,">1 nonsynonymous","Y39L F99C",2
"lib1","SARS-CoV-2","TAGCGTTTCAGGCCTA",7,98.8,9.71,-1.05,0.13,1.69,1.14,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","TAGCGTTTCTACAAAG",2,11.13,6.33,-4.44,0.73,1.5,1.15,0.04,">1 nonsynonymous","G86W I142H T148P",3
"lib1","SARS-CoV-2","TAGCGTTTGGTTCATC",2,34.01,10.64,-0.12,0.07,2.94,1.02,0,">1 nonsynonymous","A18R T100V",2
"lib1","SARS-CoV-2","TAGCTAAAATTACTAA",2,12.84,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K87R K128I F167A V173S",4
"lib1","SARS-CoV-2","TAGCTAAACTATAGAA",11,89.51,9.76,-1.01,0.1,2.19,1.07,0,">1 nonsynonymous","F8S L122E",2
"lib1","SARS-CoV-2","TAGCTAAAGCTGTATA",1,15.63,10.77,0.01,0.07,2.84,1.12,0,">1 nonsynonymous","L5P C61N",2
"lib1","SARS-CoV-2","TAGCTAAATGTTCATT",1,13.79,10.14,-0.62,0.17,2.56,1.09,0.01,">1 nonsynonymous","S139L N171S",2
"lib1","SARS-CoV-2","TAGCTAACGAATCGAA",4,26.75,7.05,-3.71,0.63,1.5,1.03,0.07,">1 nonsynonymous","I2L Y35K A42V R136P Q176S",5
"lib1","SARS-CoV-2","TAGCTAAGAATACCCT",2,16.32,6,-4.76,2,1.91,1.27,0.02,">1 nonsynonymous","C31Q G83F W106R S139G G146T",5
"lib1","SARS-CoV-2","TAGCTAAGAGCACGCT",4,22.69,10.02,-0.74,0.17,2.38,1,0.01,">1 nonsynonymous","A81K T148I F160D",3
"lib1","SARS-CoV-2","TAGCTAATTCTAGAAC",1,21.63,10.75,-0.02,0.08,2.85,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCTACAACTAAAAG",4,26.33,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N64T F99R",2
"lib1","SARS-CoV-2","TAGCTACAGCGAGAAG",3,30.36,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T55A G83K N92T Y178R",4
"lib1","SARS-CoV-2","TAGCTACCGCTAAAAT",5,14.84,6,-4.76,1.36,1.5,1.14,0.03,">1 nonsynonymous","N13S L111G T140L N157Y S200G",5
"lib1","SARS-CoV-2","TAGCTACTATAACCGT",3,37.48,10.63,-0.14,0.09,2.93,1.04,0,">1 nonsynonymous","P191R P197S",2
"lib1","SARS-CoV-2","TAGCTACTTTGTCACA",1,16.28,10.16,-0.61,0.18,2.51,1.09,0.01,">1 nonsynonymous","N13Y N40T T201S",3
"lib1","SARS-CoV-2","TAGCTAGAAAAAGAAT",6,2.88,NA,NA,NA,NA,NA,NA,"stop","S69L S113V N120R V182E K198*",5
"lib1","SARS-CoV-2","TAGCTAGCCCCGAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","Q144* C150V",2
"lib1","SARS-CoV-2","TAGCTAGGCGAGGCAA",3,90.24,8.82,-1.94,0.1,2.86,1.08,0,">1 nonsynonymous","F12I F156T P169N K198S",4
"lib1","SARS-CoV-2","TAGCTAGTAACGATGT",3,68.19,6,-4.76,1.61,1.5,1.12,0.01,">1 nonsynonymous","G101M G152T Y165K P177T",4
"lib1","SARS-CoV-2","TAGCTAGTTAGATCCA",1,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95T R124G",2
"lib1","SARS-CoV-2","TAGCTATAAGACGTAC",2,48.02,8.13,-2.63,0.18,1.86,1.17,0.01,">1 nonsynonymous","A14N A22Q G117F Q168E",4
"lib1","SARS-CoV-2","TAGCTATACATAAAGT",8,53.81,6,-4.76,0.48,1.5,1.09,0,"1 nonsynonymous","N92F",1
"lib1","SARS-CoV-2","TAGCTATACGGAGCCG",2,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S E76G D98L Y121F F185V",5
"lib1","SARS-CoV-2","TAGCTATAGAAAATAA",11,155.87,9.59,-1.17,0.06,2.86,1.07,0,">1 nonsynonymous","Y119Q S129R",2
"lib1","SARS-CoV-2","TAGCTATAGCGTCACC",6,15.02,6,-4.76,2,1.5,1.23,0.05,"1 nonsynonymous","D112W",1
"lib1","SARS-CoV-2","TAGCTATATATTTACA",3,44.07,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64W I88K N107T G116Q P169N",5
"lib1","SARS-CoV-2","TAGCTATCAAAGCTAA",1,77.73,10.74,-0.03,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCTATCAGTAGAAT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","W23S F156*",2
"lib1","SARS-CoV-2","TAGCTATGACTAGCAA",5,168.62,9.07,-1.7,0.09,2.64,1.14,0,">1 nonsynonymous","P7F C61W G174E L187F",4
"lib1","SARS-CoV-2","TAGCTATGCCAAATGC",8,66.18,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","K48Y L60A L95A G155S Y175R",5
"lib1","SARS-CoV-2","TAGCTATGGAAATTGC",4,150.09,8.56,-2.21,0.12,2.89,1.06,0.01,">1 nonsynonymous","R27K Y119S Y159F",3
"lib1","SARS-CoV-2","TAGCTATGGCAATGGT",6,155.31,10.8,0.04,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCTCAAACCCAAGA",3,8.57,6,-4.76,2,3,1.11,0,">1 nonsynonymous","S108I L183Q",2
"lib1","SARS-CoV-2","TAGCTCACACGAATAA",8,49.52,9.19,-1.57,0.11,2.63,1.19,0.01,">1 nonsynonymous","C6R R78D K87S Y178H T201L",5
"lib1","SARS-CoV-2","TAGCTCACATAGAATA",5,23.84,10.71,-0.05,0.07,2.91,1.05,0,">1 nonsynonymous","L5R K132Q",2
"lib1","SARS-CoV-2","TAGCTCACCAATACGA",11,194.91,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","F62V S129I P177L",3
"lib1","SARS-CoV-2","TAGCTCACGGTTGACA",1,30.86,10.77,0.01,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCTCACTAACAATA",7,46.82,6.11,-4.66,0.87,1.5,1.29,0.02,">1 nonsynonymous","V77M Y123W G174A F185I",4
"lib1","SARS-CoV-2","TAGCTCAGCATCCTAC",5,28.88,10.25,-0.52,0.04,2.94,1,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","TAGCTCAGGATGTAGG",9,69.52,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y121P N151L Y165L",3
"lib1","SARS-CoV-2","TAGCTCATAAATGCAT",8,45.37,10.56,-0.21,0.07,2.82,1.08,0,"1 nonsynonymous","A89T",1
"lib1","SARS-CoV-2","TAGCTCATATCTACTA",2,152.86,8.91,-1.86,0.08,2.82,1.12,0,">1 nonsynonymous","K87W Y119A",2
"lib1","SARS-CoV-2","TAGCTCATCTCACAAA",3,50.5,7.32,-3.45,0.44,1.5,1.13,0.06,">1 nonsynonymous","S43P V65Y Y121E P149W",4
"lib1","SARS-CoV-2","TAGCTCCAAAACTGAC",1,7.01,10.33,-0.44,0.39,2.36,1.09,0.07,">1 nonsynonymous","A14R F44S Y93E",3
"lib1","SARS-CoV-2","TAGCTCCAGAGCCTCC",4,26.1,10.73,-0.03,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCTCGATATCCAGA",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R N120S P169M",3
"lib1","SARS-CoV-2","TAGCTCGGTGTGTAAA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","I80K D90Y F134* G166L",4
"lib1","SARS-CoV-2","TAGCTCTAGAATGATG",4,52.2,9.49,-1.27,0.23,1.5,1.03,0.02,">1 nonsynonymous","L5M N40F F62S Q84I A89S L122S E186P",7
"lib1","SARS-CoV-2","TAGCTCTATCTCTGCA",4,76.12,10.27,-0.49,0.05,2.8,1.01,0,">1 nonsynonymous","N1I F44L",2
"lib1","SARS-CoV-2","TAGCTCTCCCTAATAC",4,91.83,10.78,0.02,0.07,2.91,1.05,0,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","TAGCTCTCGGGGTAGC",4,42.14,10.64,-0.12,0.05,2.96,1,0,"1 nonsynonymous","N30E",1
"lib1","SARS-CoV-2","TAGCTCTTATGTCATA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y T85L",2
"lib1","SARS-CoV-2","TAGCTCTTGAAATCAG",2,14.87,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T3Q Y119N F134P G155V",4
"lib1","SARS-CoV-2","TAGCTGAAAATAGCCA",3,81.81,10.17,-0.6,0.04,2.93,1,0,">1 nonsynonymous","D90S G174E",2
"lib1","SARS-CoV-2","TAGCTGAACCTCGACT",4,0.82,NA,NA,NA,NA,NA,NA,"stop","F17* N40A L60N F134N",4
"lib1","SARS-CoV-2","TAGCTGAAGATGTTGT",1,26.24,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N64I F99S K114T N120T",4
"lib1","SARS-CoV-2","TAGCTGAGAATCAGAG",1,44.85,10.17,-0.6,0.05,2.97,1,0,">1 nonsynonymous","C61H I104T",2
"lib1","SARS-CoV-2","TAGCTGAGCTATACAT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L K26R D90Y C102M F160Q V180F",6
"lib1","SARS-CoV-2","TAGCTGAGGTAAATAT",5,1.05,NA,NA,NA,NA,NA,NA,"stop","G9T P82T N92D S113* A145C",5
"lib1","SARS-CoV-2","TAGCTGCATAATGTAC",12,108.16,10.77,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TAGCTGCGAATAAGAG",5,0.28,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib1","SARS-CoV-2","TAGCTGCGTGTACCCT",9,119.77,9.85,-0.91,0.09,2.2,1.05,0,">1 nonsynonymous","C61Y F134V",2
"lib1","SARS-CoV-2","TAGCTGCTATTTTTCA",2,28.42,10.77,0,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGCTGCTTCCAATAC",3,16.45,6,-4.76,2,1.5,1.16,0.07,">1 nonsynonymous","L131D C150Y N171S Q176P",4
"lib1","SARS-CoV-2","TAGCTGGCGTACCACC",2,12.96,7.23,-3.54,0.32,1.5,1.09,0.02,">1 nonsynonymous","C61H F70T",2
"lib1","SARS-CoV-2","TAGCTGGGATATACAC",9,148.76,9.38,-1.39,0.13,1.79,1.11,0.01,">1 nonsynonymous","P96R G155A",2
"lib1","SARS-CoV-2","TAGCTGGGCATATAAC",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S D34F L122M Y165A L183F",5
"lib1","SARS-CoV-2","TAGCTGGGCCTTTCAT",6,0.93,NA,NA,NA,NA,NA,NA,"stop","F62* D97G A105T P149L",4
"lib1","SARS-CoV-2","TAGCTGGTAAATGAAG",1,35.74,10.61,-0.16,0.04,2.93,1.02,0,">1 nonsynonymous","G83F C195S",2
"lib1","SARS-CoV-2","TAGCTGTAAATTTACT",4,21.96,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23H Y93M C158R",3
"lib1","SARS-CoV-2","TAGCTGTAACAATATT",14,153.52,10.74,-0.02,0.08,2.82,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGCTGTACAGGTAGA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib1","SARS-CoV-2","TAGCTGTATGCAATTT",1,41.55,10.21,-0.55,0.13,2.33,1.02,0.01,">1 nonsynonymous","F12I F62I V77M",3
"lib1","SARS-CoV-2","TAGCTGTGACAGTTTA",1,7.77,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","D59K I88D F156T P169H",4
"lib1","SARS-CoV-2","TAGCTGTTCAGATAAA",2,10.62,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S29R P54G P82H T100C W106S E154F H189Y",7
"lib1","SARS-CoV-2","TAGCTGTTGCAAATTC",1,23.23,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R25K Y39P L57S V153A",4
"lib1","SARS-CoV-2","TAGCTTAAAATGATAT",3,29.36,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6I R25L A89H",3
"lib1","SARS-CoV-2","TAGCTTAAATATTGCC",2,36.4,10.17,-0.6,0.05,2.87,1,0,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","TAGCTTAATTACTTAG",4,13.17,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","G9T A89L I142K S184F",4
"lib1","SARS-CoV-2","TAGCTTATAGAAAATA",5,18.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3M P96R I142L C150Y",4
"lib1","SARS-CoV-2","TAGCTTCAATAGACTC",7,172.73,9.97,-0.8,0.05,2.86,1.01,0,">1 nonsynonymous","R16I N64A I142S",3
"lib1","SARS-CoV-2","TAGCTTCGCATACCTG",2,19.41,10.93,0.17,0.15,2.78,1,0.01,"1 nonsynonymous","G152N",1
"lib1","SARS-CoV-2","TAGCTTCTACACACAT",2,28.79,10.14,-0.63,0.1,2.57,1.09,0,">1 nonsynonymous","I2C T15Y T148K",3
"lib1","SARS-CoV-2","TAGCTTCTAGACCGGA",2,26.36,10.25,-0.51,0.09,2.72,1.06,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","TAGCTTCTTACAAAAT",2,31.48,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","S29V Y39Q L60R Y91L S113P P149M",6
"lib1","SARS-CoV-2","TAGCTTGACAACACTA",2,8.16,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","S69R N110Q G172R",3
"lib1","SARS-CoV-2","TAGCTTGACGTTAACA",5,70.1,10.77,0.01,0.07,2.88,1.05,0,"1 nonsynonymous","D59R",1
"lib1","SARS-CoV-2","TAGCTTGATACAGCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","N4Y L38* K128S",3
"lib1","SARS-CoV-2","TAGCTTGATCATAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H K94V",2
"lib1","SARS-CoV-2","TAGCTTGGGCGATAAC",6,51.19,10.19,-0.57,0.07,2.8,1.05,0,">1 nonsynonymous","N4K G9T A33K",3
"lib1","SARS-CoV-2","TAGCTTGGTTTAACTG",1,67.18,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N4V W23I G152H",3
"lib1","SARS-CoV-2","TAGCTTTAAATGAAAA",1,13.1,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","P82F A89M E141T",3
"lib1","SARS-CoV-2","TAGCTTTACGGTTTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T63H S69A N118G P161*",4
"lib1","SARS-CoV-2","TAGCTTTATTTGAACA",3,34.11,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K26M F47M V71S G101L",4
"lib1","SARS-CoV-2","TAGCTTTGAGCCGCAG",1,44.9,6.72,-4.04,0.42,1.5,1.17,0.02,"1 nonsynonymous","D137R",1
"lib1","SARS-CoV-2","TAGCTTTTTACACGAA",2,0.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35H",1
"lib1","SARS-CoV-2","TAGGAAAAACATCGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib1","SARS-CoV-2","TAGGAAAAATACATAT",1,16.07,7.03,-3.74,0.17,1.7,1.08,0.01,">1 nonsynonymous","Y35S K48C S69M T140F",4
"lib1","SARS-CoV-2","TAGGAAAATAAGTTCC",1,0.82,NA,NA,NA,NA,NA,NA,"stop","L5W G83D A89* T148F T201M",5
"lib1","SARS-CoV-2","TAGGAAACCTCAAATC",2,28.44,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","S19W F167V",2
"lib1","SARS-CoV-2","TAGGAAAGGACCATGA",4,11.47,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","L95K L162A",2
"lib1","SARS-CoV-2","TAGGAAATTCATCCTA",5,1.72,NA,NA,NA,NA,NA,NA,"stop","I2* G9R R73* E135I F156T",5
"lib1","SARS-CoV-2","TAGGAACAAAGTACAA",2,45.79,9.67,-1.1,0.09,2,1.07,0,">1 nonsynonymous","C6N K56S V65S",3
"lib1","SARS-CoV-2","TAGGAACAAGACACGT",6,1.41,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib1","SARS-CoV-2","TAGGAACACCCATTTG",1,11.89,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","F99G G152S",2
"lib1","SARS-CoV-2","TAGGAACACTACGCAA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","P7S W106S I138V Q144*",4
"lib1","SARS-CoV-2","TAGGAACCTAACTGGT",4,35.02,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89E D112F Y121S",3
"lib1","SARS-CoV-2","TAGGAACGGCAGATAT",2,42.81,7.51,-3.25,0.28,1.5,1.1,0.03,">1 nonsynonymous","R27S F47V D90F D98Y",4
"lib1","SARS-CoV-2","TAGGAACTAAAACAAT",1,13.65,6,-4.76,1.14,3,1.08,0,">1 nonsynonymous","G9E I28Y Y123P",3
"lib1","SARS-CoV-2","TAGGAACTCTTAGATT",3,7.9,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","N1S R124K Q176Y",3
"lib1","SARS-CoV-2","TAGGAACTTAAATACG",6,191.66,10.18,-0.58,0.04,2.71,1.04,0,"1 nonsynonymous","V52Q",1
"lib1","SARS-CoV-2","TAGGAACTTTAGATCT",2,41.41,10.19,-0.58,0.05,2.88,1.07,0,">1 nonsynonymous","D34Q T201I",2
"lib1","SARS-CoV-2","TAGGAAGACAATGAGC",4,51.08,10.75,-0.02,0.07,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGAAGGAAATACGG",3,6.8,NA,NA,NA,NA,NA,NA,"stop","Y39T T100F W106* R124E Q144G G172S P197I",7
"lib1","SARS-CoV-2","TAGGAAGGAACACGTT",4,84.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R27S L38I W106A Y143W V180L L187R",6
"lib1","SARS-CoV-2","TAGGAAGGCGCGGGTT",2,25.87,9.59,-1.18,0.12,2.57,1.14,0.01,">1 nonsynonymous","N118T G152Q",2
"lib1","SARS-CoV-2","TAGGAAGTTATTAAAA",1,54.16,6.27,-4.49,0.99,1.5,1.12,0.04,">1 nonsynonymous","P7G A81L F167E V173C",4
"lib1","SARS-CoV-2","TAGGAATAATACAGAG",2,8.15,8.37,-2.4,0.17,1.6,1.07,0.01,">1 nonsynonymous","S69G P149R E154R",3
"lib1","SARS-CoV-2","TAGGAATAATGCGACG",1,36.02,8.17,-2.6,0.13,1.89,1.13,0.01,">1 nonsynonymous","K56P K114R A145L",3
"lib1","SARS-CoV-2","TAGGAATAATGTCTCT",3,24.87,10.93,0.16,0.1,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGAATACCCCTAAA",2,50.26,10.78,0.01,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGAATAGCCCATAA",13,140.31,10.27,-0.49,0.04,2.83,1.04,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","TAGGAATCAAATTATT",9,1.19,NA,NA,NA,NA,NA,NA,"stop","V77K F99C A105R Q163* L187T",5
"lib1","SARS-CoV-2","TAGGAATCACGCCGCT",8,71.1,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","G86L F167G",2
"lib1","SARS-CoV-2","TAGGAATCCTGACATA",1,12.32,8.58,-2.18,0.32,1.5,1,0.06,">1 nonsynonymous","R25V D68A",2
"lib1","SARS-CoV-2","TAGGAATGGAGAACAG",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W F8V G166S",3
"lib1","SARS-CoV-2","TAGGAATGTGAAGCTA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","C6V A14L K198*",3
"lib1","SARS-CoV-2","TAGGAATTCGCGTGAC",1,1.4,NA,NA,NA,NA,NA,NA,"stop","G117* Y123R Y143G",3
"lib1","SARS-CoV-2","TAGGACAAAGAACGCT",4,131.44,10.05,-0.71,0.06,2.59,1.02,0,">1 nonsynonymous","C61G G83D",2
"lib1","SARS-CoV-2","TAGGACAACAGCATGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y S41N D90K",3
"lib1","SARS-CoV-2","TAGGACACTAAGTGAC",2,17.63,9.84,-0.93,0.06,2.83,1.06,0,">1 nonsynonymous","Y119T A192Y",2
"lib1","SARS-CoV-2","TAGGACAGCATAGGAA",3,118.97,10.73,-0.03,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGACATAATGAAAT",6,20.38,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","C49N",1
"lib1","SARS-CoV-2","TAGGACATACCATAAA",2,1.9,NA,NA,NA,NA,NA,NA,"stop","Y35* P96K P149S",3
"lib1","SARS-CoV-2","TAGGACATGACGCAAG",18,3.64,NA,NA,NA,NA,NA,NA,"stop","K87A A105S E141*",3
"lib1","SARS-CoV-2","TAGGACCAAAGAAACT",9,1.92,NA,NA,NA,NA,NA,NA,"stop","K26L A89*",2
"lib1","SARS-CoV-2","TAGGACCATATACATT",2,20.18,10.4,-0.37,0.06,2.85,1.11,0,">1 nonsynonymous","G155S G196L",2
"lib1","SARS-CoV-2","TAGGACCCCGAGTTCT",3,102.72,8.6,-2.17,0.25,1.79,1.18,0.03,">1 nonsynonymous","T148V F167L",2
"lib1","SARS-CoV-2","TAGGACCCCTGAGGGA",4,41.06,10.29,-0.47,0.07,2.82,1.06,0,">1 nonsynonymous","C6S K56T L122S N151M",4
"lib1","SARS-CoV-2","TAGGACCCTGCGAAAA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","L5* Y50W V77Y K87I G101V",5
"lib1","SARS-CoV-2","TAGGACCGTGGTAACG",2,23.92,7.49,-3.28,0.34,1.5,1.05,0.05,"1 nonsynonymous","V180R",1
"lib1","SARS-CoV-2","TAGGACCTACCTGAAA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","V20S I88L N107* K114T K128N",5
"lib1","SARS-CoV-2","TAGGACCTAGCCAAAT",1,29.87,10.18,-0.59,0.06,2.91,1.03,0,">1 nonsynonymous","N30A C61Y G174A",3
"lib1","SARS-CoV-2","TAGGACCTTCTAATGT",4,28.24,6.03,-4.73,0.98,1.5,1.17,0.02,">1 nonsynonymous","C49V G83Y T100M N120S I142K",5
"lib1","SARS-CoV-2","TAGGACGTTGGTTTAA",1,12.35,10.6,-0.17,0.15,2.86,1.01,0.01,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TAGGACTACTTAATGA",3,25.17,6.71,-4.06,0.31,1.5,1.12,0.02,">1 nonsynonymous","L60E N92G G174S",3
"lib1","SARS-CoV-2","TAGGACTAGCGAGTAA",3,68.42,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44N D98N T170I P177T K199L",5
"lib1","SARS-CoV-2","TAGGACTAGTCTCGGA",5,86.92,9.79,-0.97,0.11,1.96,1.08,0,">1 nonsynonymous","T85M A105M S139T",3
"lib1","SARS-CoV-2","TAGGACTCCCATACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R I104K F134H T170S",4
"lib1","SARS-CoV-2","TAGGACTTTACTCCCC",4,60.08,10.18,-0.59,0.05,2.74,1,0,">1 nonsynonymous","N4D G83V",2
"lib1","SARS-CoV-2","TAGGAGAACAAGGAAG",2,40.28,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","K56V G152T F167H",3
"lib1","SARS-CoV-2","TAGGAGACGAAATAAC",3,32.9,6,-4.76,2,3,1.17,0,">1 nonsynonymous","A81V Y93A",2
"lib1","SARS-CoV-2","TAGGAGACGAGTATTA",1,84.63,9.26,-1.51,0.07,2.38,1.17,0,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","TAGGAGACGCCAAAAT",6,41.98,6.05,-4.72,1.16,1.5,1.22,0.02,">1 nonsynonymous","E10M T15S P96L",3
"lib1","SARS-CoV-2","TAGGAGAGCATAAGTA",3,1.66,NA,NA,NA,NA,NA,NA,"stop","V103C N130P F156*",3
"lib1","SARS-CoV-2","TAGGAGCAAAATATGA",4,134.54,10.16,-0.61,0.02,2.91,1.04,0,">1 nonsynonymous","G9P K87E Q168Y",3
"lib1","SARS-CoV-2","TAGGAGCAAGAACGCA",2,55.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R S129T C158G P197T",4
"lib1","SARS-CoV-2","TAGGAGCAGTATCAAG",1,0.95,NA,NA,NA,NA,NA,NA,"stop","S36L V71* I142F",3
"lib1","SARS-CoV-2","TAGGAGCGATATCATT",8,63.16,10.2,-0.57,0.06,2.88,1.02,0,"1 nonsynonymous","P133Y",1
"lib1","SARS-CoV-2","TAGGAGCTCTATGAGA",2,8.09,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","L95N S139I",2
"lib1","SARS-CoV-2","TAGGAGCTTTGATGAC",2,26.28,9.74,-1.03,0.09,1.89,1.07,0,"1 nonsynonymous","Y121E",1
"lib1","SARS-CoV-2","TAGGAGGAAAGACCTG",3,102.51,10.75,-0.01,0.06,2.88,1.05,0,">1 nonsynonymous","D59S N130L",2
"lib1","SARS-CoV-2","TAGGAGGACTCCACTA",4,20.54,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","A42E F70V P133Q",3
"lib1","SARS-CoV-2","TAGGAGGCCGCAGGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R F62G V77L",3
"lib1","SARS-CoV-2","TAGGAGGGCAATGGCG",5,34.83,9.12,-1.65,0.25,1.54,1.26,0.03,">1 nonsynonymous","A42V V77F",2
"lib1","SARS-CoV-2","TAGGAGTAAGCGACTG",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95W F167V",2
"lib1","SARS-CoV-2","TAGGAGTATAGAAATC",2,21.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L57K D90E F99N Y121P",4
"lib1","SARS-CoV-2","TAGGAGTGTAAAAAGG",14,99.52,8.32,-2.44,0.24,1.5,1.03,0.02,">1 nonsynonymous","L38I D90V D98Y A190T",4
"lib1","SARS-CoV-2","TAGGAGTTAAATAGGA",6,32.63,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F167G P191S",2
"lib1","SARS-CoV-2","TAGGATAAAAGTATCA",2,21.69,7.66,-3.11,0.33,1.5,1.12,0.03,">1 nonsynonymous","N4P G9Q A42V S113V L125V",5
"lib1","SARS-CoV-2","TAGGATAAAATTAACC",5,59.99,8.68,-2.09,0.15,1.85,1.18,0.01,">1 nonsynonymous","E10Y F44N K132E",3
"lib1","SARS-CoV-2","TAGGATAACAACGATA",6,28.87,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G51L Y93S L122Y F156C",4
"lib1","SARS-CoV-2","TAGGATAACCATCCTA",3,79.34,10.41,-0.35,0.07,2.95,1.02,0,"1 nonsynonymous","E154D",1
"lib1","SARS-CoV-2","TAGGATAACGAAGAAT",2,33.32,10.08,-0.69,0.1,2.19,1.01,0,"1 nonsynonymous","L38N",1
"lib1","SARS-CoV-2","TAGGATAAGAGAATAA",2,11.7,10.23,-0.54,0.1,2.69,1.08,0,">1 nonsynonymous","N13A A22S",2
"lib1","SARS-CoV-2","TAGGATACCAAAAGCA",3,116.03,10.79,0.03,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGATACTAGCGATT",12,185.85,10.05,-0.71,0.06,2.26,1.07,0,">1 nonsynonymous","I2T D90I P149A",3
"lib1","SARS-CoV-2","TAGGATACTTATTAAA",1,29.95,10.02,-0.74,0.12,2.25,1.03,0.01,">1 nonsynonymous","C61Q K94R L111R T140G",4
"lib1","SARS-CoV-2","TAGGATAGATTACCAG",2,20.59,10.32,-0.45,0.07,2.88,1.07,0,">1 nonsynonymous","D90Y S139T",2
"lib1","SARS-CoV-2","TAGGATCCGCCTAGAT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","P54Q D90*",2
"lib1","SARS-CoV-2","TAGGATCCTAAGTCAA",3,46.6,6.33,-4.44,0.72,1.5,1.26,0.03,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","TAGGATCTAAATACAC",2,5.56,7,-3.77,0.29,1.5,1.02,0.01,"1 nonsynonymous","G101M",1
"lib1","SARS-CoV-2","TAGGATGAAAGGAACT",5,36.1,9.62,-1.15,0.15,1.87,1.08,0.01,"1 nonsynonymous","C49Y",1
"lib1","SARS-CoV-2","TAGGATGCTCTAGGTG",3,0.18,NA,NA,NA,NA,NA,NA,"stop","Y35* L162S",2
"lib1","SARS-CoV-2","TAGGATGGCGTAAGGG",5,1.09,NA,NA,NA,NA,NA,NA,"stop","D90K K199*",2
"lib1","SARS-CoV-2","TAGGATGTTACGGTAA",1,31.8,9.98,-0.78,0.18,2.43,1.05,0.01,">1 nonsynonymous","T55H T85Q K94S",3
"lib1","SARS-CoV-2","TAGGATTACTGCAAAG",5,14.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A42T G86Q I104S I142R G146E",5
"lib1","SARS-CoV-2","TAGGATTCTCAAGTAA",9,95.1,10.19,-0.58,0.07,2.74,1,0,">1 nonsynonymous","I138L Q144I N151K T201S",4
"lib1","SARS-CoV-2","TAGGATTGGATCTGAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","TAGGATTTTCTGTATC",3,0.11,NA,NA,NA,NA,NA,NA,"stop","G9* V20L Y119Q K198R",4
"lib1","SARS-CoV-2","TAGGCAAACGACAAAA",1,29.18,10.66,-0.1,0.05,3,1,0,"1 nonsynonymous","K132W",1
"lib1","SARS-CoV-2","TAGGCAAATTTCCGGC",6,89.89,10.79,0.03,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGCAACCAACCTAG",4,54.41,10.3,-0.46,0.1,2.44,1.04,0,">1 nonsynonymous","T3L R73K T100S K198E",4
"lib1","SARS-CoV-2","TAGGCAAGTTATAATA",1,59.74,10.37,-0.39,0.04,2.95,1.03,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","TAGGCAATAGGATATT",9,160.5,10.2,-0.56,0.05,2.73,1.02,0,">1 nonsynonymous","E10A K48E K56A F134S",4
"lib1","SARS-CoV-2","TAGGCAATCCAGAGTG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","S113V P149C P169* A190T",4
"lib1","SARS-CoV-2","TAGGCAATCGAATGTG",4,29.46,8.29,-2.48,0.26,1.5,1.18,0.03,">1 nonsynonymous","C6Q K48L V65I G83C",4
"lib1","SARS-CoV-2","TAGGCACACACGACCA",2,68.55,10.75,-0.01,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGCAGGCTTGCTAG",5,0.02,NA,NA,NA,NA,NA,NA,"stop","N40F K199*",2
"lib1","SARS-CoV-2","TAGGCAGTTCTTCTAA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","A14* S41G D98C",3
"lib1","SARS-CoV-2","TAGGCATATATGAAAC",3,50.74,10.63,-0.14,0.06,2.96,1.03,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","TAGGCATCGCAACCAA",6,86.46,10.45,-0.31,0.02,2.84,1.05,0,">1 nonsynonymous","V32A D97M Q163G L187K",4
"lib1","SARS-CoV-2","TAGGCATCTATTGTCA",8,3.57,NA,NA,NA,NA,NA,NA,"stop","C6Y S36G L60* L131P G196V",5
"lib1","SARS-CoV-2","TAGGCATGCGATTGGT",6,77.45,10.71,-0.05,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGCATTTACGTAAA",1,16.4,6.04,-4.72,0.86,1.5,1.07,0.01,">1 nonsynonymous","N92K L131I",2
"lib1","SARS-CoV-2","TAGGCCACTACCATAA",2,17.18,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L95R I138A",2
"lib1","SARS-CoV-2","TAGGCCGAAGTATGAA",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W D34H T201S",3
"lib1","SARS-CoV-2","TAGGCCTAAACCTTGT",5,163,10.59,-0.18,0.04,2.92,1.02,0,">1 nonsynonymous","A42P E141P",2
"lib1","SARS-CoV-2","TAGGCCTATACAACAA",3,35.52,9.08,-1.69,0.17,1.78,1.16,0.01,">1 nonsynonymous","F8N N64I",2
"lib1","SARS-CoV-2","TAGGCGAAAAGTAAAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S19T L122* T201V",3
"lib1","SARS-CoV-2","TAGGCGAACATCTCTT",1,0.93,NA,NA,NA,NA,NA,NA,"stop","S41* L60A S69N R73I F99Y A145I",6
"lib1","SARS-CoV-2","TAGGCGAATGCTATAC",4,63.35,8.6,-2.16,0.22,1.64,1.16,0.02,">1 nonsynonymous","S36I S53R K87N W106F",4
"lib1","SARS-CoV-2","TAGGCGACATACTAGT",13,1611.05,10.53,-0.24,0.03,2.92,1.02,0,"1 nonsynonymous","S129L",1
"lib1","SARS-CoV-2","TAGGCGACTGTTACTT",9,63.7,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V37W S45R F70S T140A G174N",5
"lib1","SARS-CoV-2","TAGGCGATATAACATA",10,103.49,6,-4.76,1.78,1.5,1.18,0.02,">1 nonsynonymous","Y39L L57F S113L R136V",4
"lib1","SARS-CoV-2","TAGGCGATCCATGACC",5,19.3,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","S19H I88S L131W E141K",4
"lib1","SARS-CoV-2","TAGGCGCAAACTTACC",9,86.19,10.69,-0.08,0.05,2.93,1.04,0,"1 nonsynonymous","T85Q",1
"lib1","SARS-CoV-2","TAGGCGCCGCCATTAC",3,13.2,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","D90M C158V",2
"lib1","SARS-CoV-2","TAGGCGCTTTGAATCC",2,8.63,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","N1A C6G I104R K128V K199V",5
"lib1","SARS-CoV-2","TAGGCGGGAATGAATA",1,2.77,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAGGCGGTATACGCAG",4,41.11,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","Y66R N92T A105M",3
"lib1","SARS-CoV-2","TAGGCGTAAATATAAT",4,8.76,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","F12A Y93F W106K G152Q",4
"lib1","SARS-CoV-2","TAGGCGTTATCTATGA",4,91.59,10.74,-0.02,0.06,2.84,1.09,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","TAGGCGTTGTAAAATC",2,17.49,7.1,-3.66,0.35,1.5,1.1,0.03,">1 nonsynonymous","N4L A33R N64I C150Y T170K",5
"lib1","SARS-CoV-2","TAGGCTAATCGCTTTG",10,28.59,NA,NA,NA,NA,NA,NA,"stop","P54G D90* G174I",3
"lib1","SARS-CoV-2","TAGGCTAATTAAACCA",4,32.36,8.41,-2.35,0.27,1.5,1.08,0.03,">1 nonsynonymous","G83W D137E",2
"lib1","SARS-CoV-2","TAGGCTACAACTCACT",1,29.69,9.5,-1.27,0.08,2.83,1.04,0,">1 nonsynonymous","P149M G152C",2
"lib1","SARS-CoV-2","TAGGCTACCAATAATA",1,27.09,10.49,-0.28,0.07,2.88,1.02,0,">1 nonsynonymous","V37C G83Q",2
"lib1","SARS-CoV-2","TAGGCTAGCCAGAATC",13,154.99,10.61,-0.15,0.07,2.89,1.07,0,">1 nonsynonymous","A42S T55K",2
"lib1","SARS-CoV-2","TAGGCTATACCCCATA",3,81.65,10.69,-0.08,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGCTATGCTAAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","V103Y K198*",2
"lib1","SARS-CoV-2","TAGGCTCACAAACAAG",5,36.63,6,-4.76,2,1.5,1.42,0.08,">1 nonsynonymous","N4Y E10M N24L P82S",4
"lib1","SARS-CoV-2","TAGGCTCGATATAAAA",8,110.02,10.06,-0.71,0.09,2.65,1.02,0,">1 nonsynonymous","L5S D90T N110W",3
"lib1","SARS-CoV-2","TAGGCTCGTCACCTTG",5,35.76,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I28S V77L P96C D137R",4
"lib1","SARS-CoV-2","TAGGCTGAGGGAAAAA",3,22.84,6.33,-4.43,0.4,3,1.09,0,">1 nonsynonymous","V103Y N130D F167Q A192R",4
"lib1","SARS-CoV-2","TAGGCTGATAAGTTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42L C61* T170*",3
"lib1","SARS-CoV-2","TAGGCTTAAGACCAAA",2,7.27,9.04,-1.73,0.29,1.5,1.04,0.05,">1 nonsynonymous","D59N V103M T148R",3
"lib1","SARS-CoV-2","TAGGCTTAGTTAGGTT",10,3.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","TAGGCTTCATTAGATC",2,9.29,9.97,-0.79,0.13,2.19,1.01,0.01,">1 nonsynonymous","C31A F134L",2
"lib1","SARS-CoV-2","TAGGCTTCGACACGGT",2,90.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5S P161M Y178I",3
"lib1","SARS-CoV-2","TAGGGAAAGCTTCACT",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R P149N",2
"lib1","SARS-CoV-2","TAGGGAAATATGCGAG",1,0.24,NA,NA,NA,NA,NA,NA,"stop","N30W D59Y E76* L95I",4
"lib1","SARS-CoV-2","TAGGGAACAAAGGAAA",4,27.8,6,-4.76,1.37,1.5,1.15,0.01,">1 nonsynonymous","G9V L38Y V77K P161R",4
"lib1","SARS-CoV-2","TAGGGAATCAACCTAG",3,27.23,10.72,-0.04,0.06,2.93,1,0,">1 nonsynonymous","E10G A42Q T100M",3
"lib1","SARS-CoV-2","TAGGGACCAACTTGGT",1,21.93,7.16,-3.6,0.35,1.5,1.24,0.04,">1 nonsynonymous","V32Y K87Y D98R W106R T140N Q144R",6
"lib1","SARS-CoV-2","TAGGGACCTGTAGTGT",2,20.84,8.49,-2.28,0.17,2.07,1.11,0.01,">1 nonsynonymous","N4V F12V S41E N120M L125T T148L",6
"lib1","SARS-CoV-2","TAGGGACGACATGTAT",1,12.78,10.55,-0.22,0.16,2.87,1,0.01,"1 nonsynonymous","N4I",1
"lib1","SARS-CoV-2","TAGGGACTAGTCCGTA",6,79.89,6.07,-4.69,0.69,1.5,1.12,0.01,">1 nonsynonymous","N58I Y159D",2
"lib1","SARS-CoV-2","TAGGGAGACAGGACAC",3,45.24,10.62,-0.14,0.05,2.96,1,0,">1 nonsynonymous","A14R P197D",2
"lib1","SARS-CoV-2","TAGGGAGATACCGGCA",10,130.01,10.61,-0.16,0.04,2.86,1.04,0,">1 nonsynonymous","N58R Q84S",2
"lib1","SARS-CoV-2","TAGGGAGTATTTAATA",2,21,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","V20M S41F L57A",3
"lib1","SARS-CoV-2","TAGGGATACCCTGAAA",1,16.48,10.52,-0.24,0.11,2.84,1.14,0.01,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","TAGGGATCCATTCAGG",4,66.44,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I88T K94E F99K Y175R T201N",5
"lib1","SARS-CoV-2","TAGGGATCTAGACCCC",3,112.37,6,-4.76,1.34,1.5,1.16,0.01,">1 nonsynonymous","K48T I80F C102K Y178T",4
"lib1","SARS-CoV-2","TAGGGATTCAAGCGAC",1,15.01,6.41,-4.36,0.58,1.5,1.16,0.02,">1 nonsynonymous","C6V F12V V37K D98H A105V",5
"lib1","SARS-CoV-2","TAGGGATTCCAATCTA",6,2.27,NA,NA,NA,NA,NA,NA,"stop","K26P G101* V182W",3
"lib1","SARS-CoV-2","TAGGGCAACTATCAAG",2,35.18,8.24,-2.52,0.2,1.83,1.09,0.02,">1 nonsynonymous","F12V T63V F126L P169A",4
"lib1","SARS-CoV-2","TAGGGCACTTTAAACG",1,7.49,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S19E A81N D112T T201N",4
"lib1","SARS-CoV-2","TAGGGCAGGTGTGTTC",1,22.6,10.38,-0.38,0.08,2.85,1.1,0,">1 nonsynonymous","S45Y K87T",2
"lib1","SARS-CoV-2","TAGGGCATGTCAAACG",1,14.6,9.96,-0.8,0.05,2.95,1.02,0,"1 nonsynonymous","T170K",1
"lib1","SARS-CoV-2","TAGGGCCACATCATAA",5,110.7,10.06,-0.71,0.05,2.9,1,0,"1 nonsynonymous","C6A",1
"lib1","SARS-CoV-2","TAGGGCCCACATATAA",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26N L60V S139C G152V",4
"lib1","SARS-CoV-2","TAGGGCCGAAGTATAG",11,4.28,NA,NA,NA,NA,NA,NA,"stop","N1* Y93R T170N S184Y",4
"lib1","SARS-CoV-2","TAGGGCGAAACATCAC",1,48.61,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S29E L38I N107D N130C G152L",5
"lib1","SARS-CoV-2","TAGGGCGGAAGGAACC",1,50.77,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A14C C150S",2
"lib1","SARS-CoV-2","TAGGGCTTAGACCGAT",5,29.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","E10A D59G I72N N92V",4
"lib1","SARS-CoV-2","TAGGGGATCACTACCA",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N L125I Y178D",3
"lib1","SARS-CoV-2","TAGGGGCCTCCGTGGG",3,45,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L5F Q84W S113L G152H P197L",5
"lib1","SARS-CoV-2","TAGGGGGAACAGTAAA",4,59.07,9.74,-1.02,0.13,2.15,1.13,0,">1 nonsynonymous","S53A L60P G116I",3
"lib1","SARS-CoV-2","TAGGGGGCTACCTTTG",3,45.65,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G9L S29F L95Q L122A",4
"lib1","SARS-CoV-2","TAGGGGTAGGCATGGA",3,5.68,NA,NA,NA,NA,NA,NA,"stop","P7D E76* R124W",3
"lib1","SARS-CoV-2","TAGGGGTATAACCACG",14,468.66,9.13,-1.63,0.06,2.83,1.1,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","TAGGGTAAAAAAATTG",2,0.39,NA,NA,NA,NA,NA,NA,"stop","A14C K94* T201M",3
"lib1","SARS-CoV-2","TAGGGTAAAGTATTCC",4,82.78,8.55,-2.22,0.11,2.87,1.05,0.01,"1 nonsynonymous","N157L",1
"lib1","SARS-CoV-2","TAGGGTAACTCTAAAC",3,76.9,10.27,-0.49,0.07,2.86,1,0,"1 nonsynonymous","S139V",1
"lib1","SARS-CoV-2","TAGGGTAATTCTGGAC",1,32.26,9.73,-1.04,0.09,2.62,1.05,0.01,">1 nonsynonymous","N1M K48S I142P",3
"lib1","SARS-CoV-2","TAGGGTCCTGAGGAAA",9,3.7,NA,NA,NA,NA,NA,NA,"stop","N1* K114W Y178L",3
"lib1","SARS-CoV-2","TAGGGTCTTCGACCTT",4,74.53,9.5,-1.27,0.05,2.88,1.08,0,">1 nonsynonymous","K56Y L125N V153G",3
"lib1","SARS-CoV-2","TAGGGTGATAAGGAGA",16,97.32,9.94,-0.83,0.08,2.12,1.08,0,">1 nonsynonymous","S41F K56P G152H Y178F",4
"lib1","SARS-CoV-2","TAGGGTGCATATACAT",1,38.37,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","Y39R C49K S69E S113P S139R F160I Q168T Q176V",8
"lib1","SARS-CoV-2","TAGGGTGTAAATTGCT",15,99.01,6,-4.76,1.07,1.5,1.14,0,">1 nonsynonymous","F17R Y21I Y123R T140N V181C",5
"lib1","SARS-CoV-2","TAGGGTGTAAGAAAAT",1,36.31,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","R124V",1
"lib1","SARS-CoV-2","TAGGGTTATGCGCACT",5,1,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib1","SARS-CoV-2","TAGGGTTCTTCGTACT",1,5.08,NA,NA,NA,NA,NA,NA,"stop","N4* E135A F167L",3
"lib1","SARS-CoV-2","TAGGGTTGATGAACAA",6,149.18,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","Y143P",1
"lib1","SARS-CoV-2","TAGGGTTGGATCTACG",3,269.95,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25V C102F Q176Y",3
"lib1","SARS-CoV-2","TAGGGTTTCAAAGGGG",3,0.4,NA,NA,NA,NA,NA,NA,"stop","N4L D59V D90H D97* F160L",5
"lib1","SARS-CoV-2","TAGGGTTTTTATCTGA",1,13.46,9.05,-1.72,0.32,1.5,1,0.07,"1 nonsynonymous","D137W",1
"lib1","SARS-CoV-2","TAGGTAACCATAAAAC",1,9.5,10.55,-0.21,0.12,2.72,1.24,0,">1 nonsynonymous","N4R S36E Q84H S184T",4
"lib1","SARS-CoV-2","TAGGTAACGAACCGTC",3,36.17,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F8T C61L D90I K132S",4
"lib1","SARS-CoV-2","TAGGTAAGAATACTGA",1,47.38,10.68,-0.09,0.08,2.93,1.03,0,">1 nonsynonymous","F44Y A190L",2
"lib1","SARS-CoV-2","TAGGTAAGTCCTGCCA",1,11.09,10.47,-0.3,0.15,2.75,1.22,0.01,">1 nonsynonymous","S41G F62A",2
"lib1","SARS-CoV-2","TAGGTAATAAAAAACA",7,22.68,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","C102N T170M",2
"lib1","SARS-CoV-2","TAGGTAATAAATACCG",5,37.84,8.49,-2.28,0.19,1.5,1.09,0.02,">1 nonsynonymous","C61S L95F",2
"lib1","SARS-CoV-2","TAGGTAATGTAAACTA",4,15.23,7.91,-2.85,0.28,1.5,1,0.04,">1 nonsynonymous","G83A I88A",2
"lib1","SARS-CoV-2","TAGGTACAAGCAATCA",2,28.06,9.88,-0.89,0.05,2.87,1,0,">1 nonsynonymous","V32K Q168E",2
"lib1","SARS-CoV-2","TAGGTACAGTGAGATA",6,48.74,9.92,-0.85,0.09,2.54,1,0,">1 nonsynonymous","V11S K56E",2
"lib1","SARS-CoV-2","TAGGTACCTAAATGAT",8,65.94,9.94,-0.83,0.08,2.29,1.05,0,">1 nonsynonymous","T15I S139C",2
"lib1","SARS-CoV-2","TAGGTACGGTCCAGCA",1,65.98,10.66,-0.1,0.05,2.89,1.05,0,">1 nonsynonymous","L5Y D97Y",2
"lib1","SARS-CoV-2","TAGGTACTAAAACTGG",1,1.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","TAGGTACTAAGCTCTT",4,34.45,10.23,-0.53,0.06,2.86,1.04,0,">1 nonsynonymous","C6N T55S",2
"lib1","SARS-CoV-2","TAGGTACTAATGCCAG",1,12.34,8.67,-2.1,0.35,1.5,1.02,0.07,">1 nonsynonymous","D90H K94H I104T",3
"lib1","SARS-CoV-2","TAGGTACTACGGTTTG",2,56.67,10.53,-0.23,0.06,2.89,1.01,0,">1 nonsynonymous","T15S L60D",2
"lib1","SARS-CoV-2","TAGGTACTTCTTTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* K114R Y119N",3
"lib1","SARS-CoV-2","TAGGTAGATCACTACG",2,74.14,10.8,0.04,0.08,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGGTAGCTTTCTACT",1,0.75,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAGGTAGGACACGCAA",1,25.28,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S43M K48W I88A E135L",4
"lib1","SARS-CoV-2","TAGGTAGTAGACAGTC",12,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126A T148S",2
"lib1","SARS-CoV-2","TAGGTAGTTTGTTGAC",5,18.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P82L F134T",2
"lib1","SARS-CoV-2","TAGGTATAAAAGAATT",1,25.31,10.66,-0.1,0.09,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGTATCAATCTTTG",2,15.37,6,-4.76,1.22,3,1.07,0.01,">1 nonsynonymous","D97S K114D R127N E141I V153P G174T",6
"lib1","SARS-CoV-2","TAGGTATCATAGGTGT",2,25.17,10.8,0.04,0.06,3,1.01,0,"1 nonsynonymous","L60E",1
"lib1","SARS-CoV-2","TAGGTATGCTTAACAC",1,36.86,6.41,-4.35,0.46,1.5,1.18,0.02,">1 nonsynonymous","F47L S53I P96R P149L",4
"lib1","SARS-CoV-2","TAGGTATGGTGAGAAA",2,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E F70Y S113M",3
"lib1","SARS-CoV-2","TAGGTATTAGACGCTA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","L5T I88N K94* G101C S200W",5
"lib1","SARS-CoV-2","TAGGTCAAAAGCAGAA",7,23.79,8.11,-2.66,0.23,1.5,1.01,0.03,">1 nonsynonymous","A81L T85M S129C F160S",4
"lib1","SARS-CoV-2","TAGGTCAAAGCGAAAG",3,1.13,NA,NA,NA,NA,NA,NA,"stop","V37S C49P D59V K87* D98M N109*",6
"lib1","SARS-CoV-2","TAGGTCAATTTCATAC",3,59.1,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R16H L38C R179W",3
"lib1","SARS-CoV-2","TAGGTCACCAGTAAAT",1,8.7,10.8,0.03,0.07,2.99,1,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","TAGGTCAGAAGTCCAA",10,62.95,10.2,-0.57,0.08,2.74,1,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","TAGGTCAGCTACATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* D97N",2
"lib1","SARS-CoV-2","TAGGTCAGGCGGGATG",10,82.68,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","C6F K94M I142P",3
"lib1","SARS-CoV-2","TAGGTCATAATCCATA",3,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112N F134Y",2
"lib1","SARS-CoV-2","TAGGTCATTTCGCAGG",5,32.06,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A14C F62T P133L",3
"lib1","SARS-CoV-2","TAGGTCCCTAACCCAA",1,0.4,NA,NA,NA,NA,NA,NA,"stop","A14N Y35D E76C V103N E154*",5
"lib1","SARS-CoV-2","TAGGTCCCTAGAAACG",1,10.24,6.35,-4.41,0.7,1.5,1.07,0.03,"1 nonsynonymous","R124L",1
"lib1","SARS-CoV-2","TAGGTCGATGAAAATA",1,33.64,10.23,-0.54,0.08,2.79,1,0.01,">1 nonsynonymous","S43T K56G N107S",3
"lib1","SARS-CoV-2","TAGGTCGTCAGCTAGG",1,33.23,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N4L V11C Y93L Y165S",4
"lib1","SARS-CoV-2","TAGGTCTCTCTCCGAT",4,9.96,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N1L V77A V103E R136L",4
"lib1","SARS-CoV-2","TAGGTCTTTACCAGCT",10,89.58,10.77,0.01,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGTGAAGAAATTGG",1,7.44,6,-4.76,2,3,1.05,0,">1 nonsynonymous","F47I G51I D98E G166K",4
"lib1","SARS-CoV-2","TAGGTGACGCCACTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D90K T201*",2
"lib1","SARS-CoV-2","TAGGTGAGAAACAAAT",16,4.62,NA,NA,NA,NA,NA,NA,"stop","C61* I88K L122F G152P Y159V",5
"lib1","SARS-CoV-2","TAGGTGCATTGTTTAC",2,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66V F99R",2
"lib1","SARS-CoV-2","TAGGTGCGCTTAACGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C N40V Y66F",3
"lib1","SARS-CoV-2","TAGGTGCTATAGCTAC",3,12.29,10.24,-0.52,0.21,2.61,1,0.03,">1 nonsynonymous","T15E G51A",2
"lib1","SARS-CoV-2","TAGGTGGCGACAAAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib1","SARS-CoV-2","TAGGTGGGCTTATCAT",15,88.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I V37I",2
"lib1","SARS-CoV-2","TAGGTGGGTCCTAATC",4,60.92,10.61,-0.16,0.04,2.92,1.04,0,">1 nonsynonymous","V37H S41K K56R",3
"lib1","SARS-CoV-2","TAGGTGTACATCCCCC",3,3,NA,NA,NA,NA,NA,NA,"stop","L5A W23* N58S L122E",4
"lib1","SARS-CoV-2","TAGGTGTCGACTATAA",3,75.68,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","W23E V37Q K128L P149L Y178D",5
"lib1","SARS-CoV-2","TAGGTGTGCACACTTA",6,62.93,10.79,0.03,0.08,2.85,1.06,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","TAGGTGTGGCAAGGGC",4,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I P96M W106C",3
"lib1","SARS-CoV-2","TAGGTTAAACACGGGC",4,25.75,9.91,-0.86,0.11,2.42,1,0.01,">1 nonsynonymous","C61R P96E",2
"lib1","SARS-CoV-2","TAGGTTAAAGGAAAAA",1,25.76,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A89M A105E N171A",3
"lib1","SARS-CoV-2","TAGGTTAATTTACCAA",3,59.4,9.94,-0.82,0.1,2.33,1,0,">1 nonsynonymous","W106T I142L",2
"lib1","SARS-CoV-2","TAGGTTACGGATGCAA",2,42.36,10.8,0.03,0.09,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGGTTACTCGGCGGG",2,62.71,6,-4.76,1.92,1.5,1.12,0,">1 nonsynonymous","G146Q V153Q N157P",3
"lib1","SARS-CoV-2","TAGGTTAGCCATAGAG",3,44.59,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","C61N Y66H Q84S R124Y C150I",5
"lib1","SARS-CoV-2","TAGGTTATAGTTTTTC",1,28.42,10.11,-0.65,0.11,2.67,1.02,0.01,">1 nonsynonymous","R27M Q144G P169T",3
"lib1","SARS-CoV-2","TAGGTTATCAACTAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","I2L S19T C61L C102V G166E G174*",6
"lib1","SARS-CoV-2","TAGGTTCACAACCCAC",6,102.8,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N1R K26V P133D Y175I",4
"lib1","SARS-CoV-2","TAGGTTCATACGAGTG",1,18.64,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G9R F99C N107T",3
"lib1","SARS-CoV-2","TAGGTTCCGTGCTCCA",6,61.4,9.55,-1.21,0.08,1.77,1.12,0,">1 nonsynonymous","T3N G86S",2
"lib1","SARS-CoV-2","TAGGTTCGAGTTAATG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","N40D G83*",2
"lib1","SARS-CoV-2","TAGGTTGACCGTTATT",5,0.27,NA,NA,NA,NA,NA,NA,"stop","K87* K199L",2
"lib1","SARS-CoV-2","TAGGTTGCATTTTGCT",3,14.05,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","D75M Y123R E135P",3
"lib1","SARS-CoV-2","TAGGTTGTTACCTAAT",8,45.74,8.63,-2.13,0.15,1.5,1.19,0.01,">1 nonsynonymous","G9C L57G D97R L122R S164G",5
"lib1","SARS-CoV-2","TAGGTTTAAAATACGC",2,36.13,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","L60S R78L P96E L111F P169T",5
"lib1","SARS-CoV-2","TAGGTTTCTACAGTGC",5,0.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAGGTTTTCACGGGTG",2,70.49,9.88,-0.88,0.11,2.04,1.1,0,">1 nonsynonymous","N13T A33D",2
"lib1","SARS-CoV-2","TAGGTTTTGATTTATA",7,101.5,10.22,-0.55,0.03,2.9,1.05,0,">1 nonsynonymous","S129G P169Q",2
"lib1","SARS-CoV-2","TAGGTTTTTTTTTCAA",7,247.82,8.79,-1.97,0.07,2.58,1.09,0,">1 nonsynonymous","G51K Y119K C195S",3
"lib1","SARS-CoV-2","TAGTAAAAAGACTGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122N",1
"lib1","SARS-CoV-2","TAGTAAAAAGTTGTGG",4,25.32,9.03,-1.73,0.26,1.56,1.1,0.04,">1 nonsynonymous","A14C A42D Y91K G152S",4
"lib1","SARS-CoV-2","TAGTAAAAATGTTTTG",2,46.53,7.55,-3.22,0.22,1.5,1.2,0.01,">1 nonsynonymous","F12Q S36F T63V D90L D97S S200Y",6
"lib1","SARS-CoV-2","TAGTAAAACCGGCTTA",6,95.39,10.63,-0.13,0.04,2.9,1.03,0,">1 nonsynonymous","K56Y K198T",2
"lib1","SARS-CoV-2","TAGTAAAATAAACGCA",7,71.06,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N24E C31V P96I G172V",4
"lib1","SARS-CoV-2","TAGTAAAATACTGAGT",4,40.41,10.57,-0.2,0.11,2.79,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGTAAAATAGAAACC",4,31.46,8.41,-2.36,0.17,1.5,1.13,0.01,">1 nonsynonymous","D90I S147R E154H A190S T201E",5
"lib1","SARS-CoV-2","TAGTAAAATTACACTG",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122A S139I P161L Y175V",4
"lib1","SARS-CoV-2","TAGTAAACAAATGTAT",6,0.49,NA,NA,NA,NA,NA,NA,"stop","K48L A67I G83* R124W",4
"lib1","SARS-CoV-2","TAGTAAACTAAACCCA",2,97.08,9.46,-1.31,0.34,1.5,1,0.04,">1 nonsynonymous","F12G Y50V A89V L111M I142M N151V F185I",7
"lib1","SARS-CoV-2","TAGTAAAGACGATAAG",14,134.82,7.14,-3.63,0.27,1.5,1.1,0.02,">1 nonsynonymous","T55Q R73N D98Q E141L F160D",5
"lib1","SARS-CoV-2","TAGTAAAGTTCAGCTA",3,19.53,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","N64Q P177M",2
"lib1","SARS-CoV-2","TAGTAAATAGTAAAAC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","R27* S36R N92M L125W E141C Y165V",6
"lib1","SARS-CoV-2","TAGTAAATGAACACAT",3,11.66,10.71,-0.05,0.06,2.84,1.15,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TAGTAAATGTTCCCAT",3,17.53,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A14W N151V N157L",3
"lib1","SARS-CoV-2","TAGTAAATTAAACACT",2,44.2,9.02,-1.74,0.14,1.74,1.23,0.01,">1 nonsynonymous","S29K L38E L122V",3
"lib1","SARS-CoV-2","TAGTAAATTTTATTCA",9,94.64,7.83,-2.93,0.14,1.5,1.14,0.01,">1 nonsynonymous","K87G N107V",2
"lib1","SARS-CoV-2","TAGTAACAATGCGGTA",2,61992.45,10.77,0,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTAACAGAGAACAG",2,12.14,6.48,-4.28,0.37,1.5,1.04,0.03,">1 nonsynonymous","V115G Y121S P149W",3
"lib1","SARS-CoV-2","TAGTAACAGTCCCACG",3,2.49,NA,NA,NA,NA,NA,NA,"stop","N30V P82M A89* A105Y L122V C150T",6
"lib1","SARS-CoV-2","TAGTAACATAGACCAC",15,166.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L G74V N107P E141I T201H",5
"lib1","SARS-CoV-2","TAGTAACATCTCACTA",1,8.7,7.09,-3.67,0.5,1.5,1.21,0.05,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","TAGTAACCAAACCGCC",4,12.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V V20G W23C A89S V103A I142N",6
"lib1","SARS-CoV-2","TAGTAACCCACTCATA",10,107.53,10.71,-0.05,0.07,2.94,1.01,0,"1 nonsynonymous","N40G",1
"lib1","SARS-CoV-2","TAGTAACGAATCAATA",3,89.43,10.03,-0.73,0.04,2.8,1.05,0,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","TAGTAACGTAAATAGG",4,57.16,10.8,0.04,0.05,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTAACTTCAAGATA",4,7.04,6.58,-4.18,0.27,3,1.06,0,">1 nonsynonymous","A14P S113N V173C",3
"lib1","SARS-CoV-2","TAGTAAGAAATACGAA",5,35.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6K T55L Y175K",3
"lib1","SARS-CoV-2","TAGTAAGAGAGAAAAA",3,36.17,10.72,-0.04,0.07,2.92,1.04,0,">1 nonsynonymous","L60F S129R",2
"lib1","SARS-CoV-2","TAGTAAGCAGCTCACA",7,32.19,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L57C V103M T148F",3
"lib1","SARS-CoV-2","TAGTAAGCATTCGAAG",8,71.55,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G86E V103S G116Y P161D",4
"lib1","SARS-CoV-2","TAGTAAGCTAAAACCT",5,70.36,10.28,-0.48,0.06,2.79,1.02,0,">1 nonsynonymous","L5F R136S",2
"lib1","SARS-CoV-2","TAGTAAGGCATCTTAC",6,9.42,9.07,-1.7,0.25,2.33,1.13,0.03,">1 nonsynonymous","D34Y F44I I142L",3
"lib1","SARS-CoV-2","TAGTAAGGTGTGTATA",1,29.71,10.75,-0.01,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTAAGGTTCTAAAG",11,39.65,6.61,-4.16,0.3,1.5,1.13,0.01,">1 nonsynonymous","A14H F70V T85N F99S A190R",5
"lib1","SARS-CoV-2","TAGTAATAAATTGAGC",4,36.41,9.53,-1.23,0.14,1.66,1.12,0.01,">1 nonsynonymous","L5I A89T S139F",3
"lib1","SARS-CoV-2","TAGTAATAATACTTAG",3,50.8,10.77,0.01,0.06,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TAGTAATAGAATAACA",7,0.54,NA,NA,NA,NA,NA,NA,"stop","A22V R25Q S36V S200*",4
"lib1","SARS-CoV-2","TAGTAATAGACGTAAA",3,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V K198N",2
"lib1","SARS-CoV-2","TAGTAATCACCACTCC",7,85.78,10.37,-0.39,0.04,2.84,1,0,"1 nonsynonymous","S139L",1
"lib1","SARS-CoV-2","TAGTAATCCACCCCGT",2,58.72,9.99,-0.77,0.08,2.81,1.03,0,">1 nonsynonymous","L60Y Y121I K132I",3
"lib1","SARS-CoV-2","TAGTAATCTGATATGC",8,52.03,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","L57R K94A A105H",3
"lib1","SARS-CoV-2","TAGTAATTAGAGTGAC",13,215.81,9.9,-0.86,0.04,2.89,1.05,0,">1 nonsynonymous","V37I F160W T170K",3
"lib1","SARS-CoV-2","TAGTAATTATATATCA",1,9.96,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I2A R179G",2
"lib1","SARS-CoV-2","TAGTAATTCCAAGACA",2,61.88,10.69,-0.07,0.08,2.89,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTACAAATCAAAGT",2,48.46,8.62,-2.14,0.13,2.61,1.02,0.01,">1 nonsynonymous","Y91V L122K G152S G166T S200V",5
"lib1","SARS-CoV-2","TAGTACAAGGCGATTT",3,215.48,10.65,-0.11,0.04,2.91,1.06,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TAGTACAATCATATAC",11,56.81,6.9,-3.87,0.33,1.5,1.25,0.02,">1 nonsynonymous","N13S G117N Q176T",3
"lib1","SARS-CoV-2","TAGTACAATGTGTTTT",1,9.45,6.28,-4.49,0.61,1.5,1.06,0.02,">1 nonsynonymous","R124K R136S G172D",3
"lib1","SARS-CoV-2","TAGTACACAATACAGT",6,178.77,8.73,-2.04,0.09,2.89,1.08,0,">1 nonsynonymous","L122I A145D",2
"lib1","SARS-CoV-2","TAGTACACACAGGATC",10,98.56,8.28,-2.49,0.35,1.5,1.04,0.05,">1 nonsynonymous","G51W T100Y A105S T148F V173I",5
"lib1","SARS-CoV-2","TAGTACAGAAAATTTC",2,8.72,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","Y35S C61L D97V R136S V173H",5
"lib1","SARS-CoV-2","TAGTACAGCTAATAAA",7,32.82,7.51,-3.26,0.16,1.5,1.11,0.01,">1 nonsynonymous","S41T V65T V77K G83R P133M C150I",6
"lib1","SARS-CoV-2","TAGTACAGGTGGTTAT",3,145.41,10.72,-0.04,0.05,2.9,1.06,0,">1 nonsynonymous","K132L F160Q",2
"lib1","SARS-CoV-2","TAGTACATAAAAGCCA",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R N107K G155S",3
"lib1","SARS-CoV-2","TAGTACATATAATAAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7*",1
"lib1","SARS-CoV-2","TAGTACATCATCGTCG",3,11.1,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","D68K D98V Y121S I138Y",4
"lib1","SARS-CoV-2","TAGTACATCTCTGGGA",3,32.83,10.7,-0.06,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTACATTCCACTCC",3,9.57,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41H G86V Q168L",3
"lib1","SARS-CoV-2","TAGTACCAAAAATCAA",5,59.44,8.58,-2.18,0.1,2.39,1.08,0,">1 nonsynonymous","A42C G146M",2
"lib1","SARS-CoV-2","TAGTACCAAAAATGAA",1,25.95,10.7,-0.07,0.09,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTACCAGTAGCTAG",3,1.86,NA,NA,NA,NA,NA,NA,"stop","L5* R27F T55H",3
"lib1","SARS-CoV-2","TAGTACCATCCAATAT",9,57,8.76,-2,0.22,1.5,1.07,0.01,">1 nonsynonymous","V52Y N64E P82K G146S P197L",5
"lib1","SARS-CoV-2","TAGTACCGTATAACAC",3,21.13,10.06,-0.71,0.14,2.74,1.16,0.01,">1 nonsynonymous","A42N T63G T85N F156H",4
"lib1","SARS-CoV-2","TAGTACCGTTATACTA",9,0.54,NA,NA,NA,NA,NA,NA,"stop","L5* V103A",2
"lib1","SARS-CoV-2","TAGTACCTGTAATCTG",2,172.83,10.36,-0.41,0.05,2.91,1.04,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","TAGTACGAAACGGAAT",3,66,7.87,-2.89,0.14,2.28,1.14,0.01,"1 nonsynonymous","C158S",1
"lib1","SARS-CoV-2","TAGTACGCGCTATAGC",4,46.66,9.6,-1.17,0.06,2.82,1.06,0,">1 nonsynonymous","T3E G117T",2
"lib1","SARS-CoV-2","TAGTACGGGGTTATCT",4,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A190W T201Y",2
"lib1","SARS-CoV-2","TAGTACGTACGCATAG",7,95.85,10.39,-0.38,0.06,2.72,1.01,0,">1 nonsynonymous","Y91V S164R T201L",3
"lib1","SARS-CoV-2","TAGTACGTCACACTTA",3,39.38,9.49,-1.27,0.06,2.86,1.06,0,">1 nonsynonymous","K87E N120L",2
"lib1","SARS-CoV-2","TAGTACTAGAGCCATA",10,236.86,10.31,-0.46,0.04,2.9,1.01,0,">1 nonsynonymous","L5V D97N G116V",3
"lib1","SARS-CoV-2","TAGTACTAGTGACCGT",2,24.81,10.78,0.02,0.09,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTACTATGCAAATA",1,28.6,10.83,0.06,0.07,2.96,1,0,">1 nonsynonymous","P7L V37F K56E",3
"lib1","SARS-CoV-2","TAGTACTGCTCGGTCT",1,2.14,NA,NA,NA,NA,NA,NA,"stop","S29G Y35* V103R",3
"lib1","SARS-CoV-2","TAGTACTGGCACGGTT",5,152.38,8.86,-1.91,0.12,1.91,1.15,0.01,">1 nonsynonymous","Y35T K87A V173S T201A",4
"lib1","SARS-CoV-2","TAGTACTGGGATCACT",11,177.8,10.38,-0.38,0.03,2.87,1.03,0,">1 nonsynonymous","A89S S129M",2
"lib1","SARS-CoV-2","TAGTACTTAACTAAAA",1,0.64,NA,NA,NA,NA,NA,NA,"stop","Y35P C61V R73A D137G G146*",5
"lib1","SARS-CoV-2","TAGTAGAACTATACTT",6,57.23,9.85,-0.92,0.1,1.84,1.06,0,">1 nonsynonymous","T3G S45D L95C E186D",4
"lib1","SARS-CoV-2","TAGTAGAATATGCGTG",8,49.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S45K R78L F99Q K198R",4
"lib1","SARS-CoV-2","TAGTAGAATGACTAAT",3,127.92,9.97,-0.8,0.06,2.52,1.07,0,">1 nonsynonymous","G83H D97G Y178V",3
"lib1","SARS-CoV-2","TAGTAGAATGATCCCT",7,87.84,10.82,0.05,0.04,2.96,1,0,">1 nonsynonymous","P197T T201S",2
"lib1","SARS-CoV-2","TAGTAGACCTTTCATG",3,107.07,8.58,-2.19,0.13,2.85,1.08,0.01,">1 nonsynonymous","Q168V G174F",2
"lib1","SARS-CoV-2","TAGTAGAGGTCGTACT",1,12.47,10.95,0.19,0.14,2.83,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGTAGATATAATCAA",8,117.95,8.95,-1.81,0.09,2.36,1.14,0,">1 nonsynonymous","F99Y R136K F156S",3
"lib1","SARS-CoV-2","TAGTAGATTACGTTAA",9,6.62,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","TAGTAGATTATTGTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","TAGTAGCAGAAAGTCT",4,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K G83W V103H F185T",4
"lib1","SARS-CoV-2","TAGTAGCATTCAATTA",13,21.35,NA,NA,NA,NA,NA,NA,"stop","L57* A89K",2
"lib1","SARS-CoV-2","TAGTAGCGCCCATTTT",2,2.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","TAGTAGCTTACAAACT",1,22.43,10.73,-0.03,0.08,2.79,1.1,0,">1 nonsynonymous","K128S T201R",2
"lib1","SARS-CoV-2","TAGTAGGAAGGCGAAC",2,6.92,9.75,-1.01,0.24,1.89,1.09,0.02,"1 nonsynonymous","F12G",1
"lib1","SARS-CoV-2","TAGTAGGCCGCTGTAA",2,40.57,6,-4.76,2,1.5,1.25,0.02,"1 nonsynonymous","N92W",1
"lib1","SARS-CoV-2","TAGTAGGGCATTCTAA",2,23.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13L S36K L131T",3
"lib1","SARS-CoV-2","TAGTAGGTAAAGTAAC",1,16.89,10.57,-0.19,0.11,2.91,1.06,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","TAGTAGGTATATTATT",1,8.97,8.13,-2.63,0.49,1.5,1,0.08,">1 nonsynonymous","G116C G146D F185G K199R",4
"lib1","SARS-CoV-2","TAGTAGGTCCTGTGTA",2,31.54,10.61,-0.16,0.07,2.93,1.05,0,"1 nonsynonymous","V153W",1
"lib1","SARS-CoV-2","TAGTAGTAACAAATCA",7,43.11,10.75,-0.02,0.08,2.83,1.16,0,"1 nonsynonymous","G51R",1
"lib1","SARS-CoV-2","TAGTAGTAATCAAGTG",2,22.23,9.53,-1.23,0.12,2.28,1.08,0.01,">1 nonsynonymous","D112V T201L",2
"lib1","SARS-CoV-2","TAGTAGTACTTTGCAT",3,73.97,10.14,-0.63,0.12,2.18,1.04,0.01,"1 nonsynonymous","I28T",1
"lib1","SARS-CoV-2","TAGTAGTCAAATAAAG",3,34.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V20M C61A Q144S",3
"lib1","SARS-CoV-2","TAGTAGTCGGCAGAAA",1,36.98,10.75,-0.02,0.14,2.94,1.05,0.01,"1 nonsynonymous","T85S",1
"lib1","SARS-CoV-2","TAGTAGTCTTACCAAA",8,107.13,10.58,-0.19,0.05,2.84,1.06,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","TAGTAGTTGTAAAACT",1,5.08,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N13G Y121C F134N T148A",4
"lib1","SARS-CoV-2","TAGTATAAAGTTTACG",4,36.46,8.78,-1.99,0.18,2.12,1.18,0.02,">1 nonsynonymous","C6Y C61K G152P T201K",4
"lib1","SARS-CoV-2","TAGTATAACAACATTT",4,41.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12D K94Y Y119C",3
"lib1","SARS-CoV-2","TAGTATACAAAGTCAT",3,0.91,NA,NA,NA,NA,NA,NA,"stop","F12N T63P G146* T201H",4
"lib1","SARS-CoV-2","TAGTATACAAGAATGG",12,93.81,9.5,-1.26,0.11,2.33,1.12,0,">1 nonsynonymous","N1L R27P N151Y G174K",4
"lib1","SARS-CoV-2","TAGTATACACTATGCT",2,10.75,10.41,-0.35,0.22,2.58,1.22,0.01,">1 nonsynonymous","K56I H189K T201G",3
"lib1","SARS-CoV-2","TAGTATACATAAAAAC",5,51.12,10.06,-0.7,0.05,2.86,1.04,0,"1 nonsynonymous","L125S",1
"lib1","SARS-CoV-2","TAGTATACCGCGTACG",5,41.84,10.59,-0.17,0.07,2.88,1.04,0,">1 nonsynonymous","F8L T63S A105T",3
"lib1","SARS-CoV-2","TAGTATACTTCACCAC",5,137.89,10.24,-0.53,0.03,2.87,1.03,0,">1 nonsynonymous","R27Q S69R A190G",3
"lib1","SARS-CoV-2","TAGTATATTATACTAT",3,68.51,8.86,-1.9,0.09,1.97,1.09,0,">1 nonsynonymous","A33T Q176L",2
"lib1","SARS-CoV-2","TAGTATCAAAATTAGG",11,46.66,6,-4.76,1.83,1.5,1.13,0.01,">1 nonsynonymous","N40M W106C G152M C158N T201M",5
"lib1","SARS-CoV-2","TAGTATCAAAGAAACT",4,14.32,6,-4.76,1.13,1.5,1.23,0.03,">1 nonsynonymous","A14V L57C T85H D112I P149M",5
"lib1","SARS-CoV-2","TAGTATCAGTGAATTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87V K114T",2
"lib1","SARS-CoV-2","TAGTATCATGACTAAG",3,54.32,8.45,-2.31,0.19,1.98,1.19,0.01,">1 nonsynonymous","D112V S164E",2
"lib1","SARS-CoV-2","TAGTATCCAATGGTCT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","C49L D59G L60W A105* Q144Y Y175N",6
"lib1","SARS-CoV-2","TAGTATCGAGATTCAC",1,19.05,10.23,-0.53,0.16,2.41,1,0.01,">1 nonsynonymous","T3V N107G T201N",3
"lib1","SARS-CoV-2","TAGTATCGATACTCAA",2,64.89,10.76,-0.01,0.09,2.79,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTATCGATAGCTGC",1,5.67,8.48,-2.28,0.16,2.8,1.22,0,"1 nonsynonymous","F126R",1
"lib1","SARS-CoV-2","TAGTATGACGAGTAAA",2,75.85,10.58,-0.19,0.05,2.87,1.07,0,"1 nonsynonymous","N120V",1
"lib1","SARS-CoV-2","TAGTATGCAAGCGCAT",4,35.2,6,-4.76,0.57,1.5,1.05,0,">1 nonsynonymous","Y35T N107R R136A G152I Q176L",5
"lib1","SARS-CoV-2","TAGTATGGATCTAAGC",3,30.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V V20R C49S",3
"lib1","SARS-CoV-2","TAGTATGGATTACGCT",5,69.31,9.63,-1.14,0.1,1.95,1.08,0,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TAGTATGGGAAGATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1P K56* Y66* F99I V115F L122V",6
"lib1","SARS-CoV-2","TAGTATGTGGATAAAC",2,92.86,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37I R124I Y143L C158G",4
"lib1","SARS-CoV-2","TAGTATTAATACATTC",5,75.83,10.77,0.01,0.07,2.93,1.05,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TAGTATTACCTAATAT",2,5.86,6,-4.76,2,3,1.1,0.01,"1 nonsynonymous","L183Q",1
"lib1","SARS-CoV-2","TAGTATTATATACATT",16,1.08,NA,NA,NA,NA,NA,NA,"stop","F8G V77* V181G",3
"lib1","SARS-CoV-2","TAGTATTCTCTGCTAG",1,79.81,10.76,-0.01,0.05,2.93,1.03,0,"1 nonsynonymous","F160H",1
"lib1","SARS-CoV-2","TAGTATTTAATGTGTT",11,129.43,10.45,-0.31,0.04,2.86,1.05,0,"1 nonsynonymous","S45R",1
"lib1","SARS-CoV-2","TAGTATTTCGTAAAAG",6,10.38,10,-0.77,0.29,2,1,0.02,">1 nonsynonymous","F12M A42N G83T V173I",4
"lib1","SARS-CoV-2","TAGTATTTGTGGCAAA",8,132.64,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","TAGTATTTTTGTACAA",12,110.09,9.38,-1.38,0.14,1.61,1.17,0.01,">1 nonsynonymous","L5E S29K W106R K128V",4
"lib1","SARS-CoV-2","TAGTCAAAATCAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I104C G117*",2
"lib1","SARS-CoV-2","TAGTCAAAATTAAGTG",1,5.88,6,-4.76,2,3,1.08,0,">1 nonsynonymous","F8V C61S D68P D98K S139T G174T",6
"lib1","SARS-CoV-2","TAGTCAAACATGCGTT",2,38.61,10.35,-0.42,0.06,2.88,1,0,">1 nonsynonymous","T55P L162V",2
"lib1","SARS-CoV-2","TAGTCAAACATTTTAT",5,24.2,9.99,-0.77,0.11,2.15,1.01,0,">1 nonsynonymous","N1K A89G",2
"lib1","SARS-CoV-2","TAGTCAAAGTGTTAAG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I80* Y91* G116H P149S G172F",5
"lib1","SARS-CoV-2","TAGTCAAATCCCAAGG",5,2.52,NA,NA,NA,NA,NA,NA,"stop","S19* T170P",2
"lib1","SARS-CoV-2","TAGTCAAATCGACAAC",8,141.19,6.17,-4.6,0.96,1.5,1.24,0.02,">1 nonsynonymous","V77P Y93D C150K Y178I S200A",5
"lib1","SARS-CoV-2","TAGTCAACAACGATCA",4,119.65,10.71,-0.06,0.06,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTCAACATTAGACA",1,66.85,9.83,-0.93,0.08,2.46,1.04,0,">1 nonsynonymous","N24M I142H",2
"lib1","SARS-CoV-2","TAGTCAACATTTGCAC",3,34.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G83L K87E D90G L131F",4
"lib1","SARS-CoV-2","TAGTCAACGCACCACA",2,73.43,9.75,-1.02,0.09,2.4,1.09,0,">1 nonsynonymous","F134I F156W",2
"lib1","SARS-CoV-2","TAGTCAAGGGAAGGAT",4,15.78,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","F62E G101R S184A",3
"lib1","SARS-CoV-2","TAGTCAAGGGCGGATA",4,10.02,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","G83R Y93H L125Y Y143W",4
"lib1","SARS-CoV-2","TAGTCAAGGTAATCTT",5,43.54,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C6S S45K R78I C158T",4
"lib1","SARS-CoV-2","TAGTCAATCTTATTAT",1,38.66,9.2,-1.57,0.22,1.5,1,0.02,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","TAGTCACAAAGCCCCA",2,17.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S29Q C102L W106C",3
"lib1","SARS-CoV-2","TAGTCACATTGAAATG",2,28.2,9.26,-1.51,0.13,2.18,1.04,0.01,">1 nonsynonymous","A14T L111C G166R N171W",4
"lib1","SARS-CoV-2","TAGTCACCCTCTCGAG",6,18.43,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","C49S V71W D97F N130Y",4
"lib1","SARS-CoV-2","TAGTCACGCACCACAT",6,47.9,6.15,-4.62,1.11,1.5,1.29,0.03,">1 nonsynonymous","L95P T140D",2
"lib1","SARS-CoV-2","TAGTCACGCATCTGCT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V K56Y G155S P161K P169T",5
"lib1","SARS-CoV-2","TAGTCACTAAGTTTGA",3,19.3,10.84,0.08,0.1,2.85,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGTCACTACACAGTC",4,66.95,6,-4.76,2,3,1.22,0,">1 nonsynonymous","F8S S36R D75W N171I",4
"lib1","SARS-CoV-2","TAGTCAGAACAACAGG",4,0.74,NA,NA,NA,NA,NA,NA,"stop","C6F V37*",2
"lib1","SARS-CoV-2","TAGTCAGACCTTGAAG",1,11.75,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","F12I V20M R27M",3
"lib1","SARS-CoV-2","TAGTCAGAGTAGATTT",1,30.59,10.77,0,0.1,2.86,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGTCAGCGGCAGCGT",9,607.13,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G9K F17S L57M G86F W106M Y119T K128M",7
"lib1","SARS-CoV-2","TAGTCAGCTATGTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","T100* R136V V173L T201P",4
"lib1","SARS-CoV-2","TAGTCAGGCTAAACAG",10,134.65,10.52,-0.24,0.03,2.92,1.07,0,">1 nonsynonymous","N1L E141G",2
"lib1","SARS-CoV-2","TAGTCAGTCTCGGTGT",3,82.85,8.03,-2.74,0.2,1.71,1.15,0.01,"1 nonsynonymous","D112S",1
"lib1","SARS-CoV-2","TAGTCATAAAGTGACG",8,155.68,10.22,-0.55,0.06,2.85,1.03,0,"1 nonsynonymous","V11F",1
"lib1","SARS-CoV-2","TAGTCATAAGTTAACT",2,11.3,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","I2P I88Q R124V",3
"lib1","SARS-CoV-2","TAGTCATACCAACGAA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","P54S G86* G155W L162Y",4
"lib1","SARS-CoV-2","TAGTCATACCCACTGC",6,310.15,10.61,-0.15,0.03,2.91,1.03,0,">1 nonsynonymous","S164T Y178N",2
"lib1","SARS-CoV-2","TAGTCATCGGCAAATT",2,9.47,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","T3G G51N N107I K114I Y143I P149I",6
"lib1","SARS-CoV-2","TAGTCATGAAATTCTG",4,20.85,6.11,-4.65,1.22,1.5,1.19,0.04,">1 nonsynonymous","Y159G P169I S184L",3
"lib1","SARS-CoV-2","TAGTCATGCTTACCAA",2,53.17,8.85,-1.91,0.09,2.78,1.1,0,">1 nonsynonymous","K26L D90L Y119S",3
"lib1","SARS-CoV-2","TAGTCATTAAAAATGA",3,31.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P A14C Y50M F70N D90K",5
"lib1","SARS-CoV-2","TAGTCATTAAGATGCG",6,91.86,10.46,-0.3,0.04,2.84,1.09,0,">1 nonsynonymous","T15S D97K I138K",3
"lib1","SARS-CoV-2","TAGTCCAAAGTGATCC",1,28.93,10.56,-0.21,0.13,2.76,1.08,0.01,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","TAGTCCAACACTAGCT",2,47.52,10.68,-0.09,0.05,2.89,1.02,0,"1 nonsynonymous","T15A",1
"lib1","SARS-CoV-2","TAGTCCAAGTAGATAT",4,50.85,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S19M T55Y T100F A105L",4
"lib1","SARS-CoV-2","TAGTCCAGACGCAAAT",1,39.22,8.87,-1.9,0.15,2.09,1.2,0.01,"1 nonsynonymous","P161V",1
"lib1","SARS-CoV-2","TAGTCCATAACAGCTT",1,13.78,10.66,-0.11,0.08,2.97,1,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","TAGTCCATAGAAATCT",3,3.2,NA,NA,NA,NA,NA,NA,"stop","T15* I72P A89S N107* P169D",5
"lib1","SARS-CoV-2","TAGTCCCAAGAAACAG",4,73.43,10.75,-0.01,0.05,2.93,1.05,0,"1 nonsynonymous","K198Q",1
"lib1","SARS-CoV-2","TAGTCCCTTTACACAT",4,57.03,7.18,-3.58,0.22,1.69,1.17,0.01,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","TAGTCCGACCATGAAA",1,1.23,NA,NA,NA,NA,NA,NA,"stop","N1S Y35* N120Y F156S T170P",5
"lib1","SARS-CoV-2","TAGTCCGATCACCCCT",3,111.58,10.75,-0.01,0.11,2.77,1.07,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","TAGTCCGATGATACAT",3,44.27,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","G86Q E141G Q168L G172R",4
"lib1","SARS-CoV-2","TAGTCCGGATGCCATT",2,33.72,6.89,-3.88,0.58,1.5,1.05,0.05,">1 nonsynonymous","K56S G83D S113V Q163P T201R",5
"lib1","SARS-CoV-2","TAGTCCGTGTTAAAGC",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K48G G116R",3
"lib1","SARS-CoV-2","TAGTCCGTTCCAACAG",15,298.25,10.33,-0.43,0.05,2.7,1.07,0,">1 nonsynonymous","A33I E135M",2
"lib1","SARS-CoV-2","TAGTCCGTTGATAAGG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","A22R I88C F134*",3
"lib1","SARS-CoV-2","TAGTCCTAACTCAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* C61R F156*",3
"lib1","SARS-CoV-2","TAGTCGAAAATGACGG",2,54.76,10.78,0.01,0.06,2.86,1.07,0,">1 nonsynonymous","E154S K198Q",2
"lib1","SARS-CoV-2","TAGTCGAACCACTCCT",3,9.28,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N13S R127L Y165E T201V",4
"lib1","SARS-CoV-2","TAGTCGACAGTACACG",9,99.29,8.6,-2.16,0.25,1.5,1.08,0.02,">1 nonsynonymous","P82R Q144E",2
"lib1","SARS-CoV-2","TAGTCGACCAGGTAAA",2,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H S41P W106G G166S",4
"lib1","SARS-CoV-2","TAGTCGAGGGCACGCG",22,187.23,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G51V I104G",2
"lib1","SARS-CoV-2","TAGTCGATTCAGCCGT",3,69.65,10.77,0,0.08,2.96,1.05,0,">1 nonsynonymous","T85Q N130T",2
"lib1","SARS-CoV-2","TAGTCGCACAGTGTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C49Y L95R C102* S113A G155S L162K P197C",7
"lib1","SARS-CoV-2","TAGTCGCCCTACAATT",2,49.61,10.79,0.03,0.06,2.98,1,0,">1 nonsynonymous","I2F S29R",2
"lib1","SARS-CoV-2","TAGTCGCTATAGACAC",2,30.51,7.54,-3.23,0.25,1.5,1.14,0.02,">1 nonsynonymous","G9L K94V Y121L",3
"lib1","SARS-CoV-2","TAGTCGCTGCCTCTAA",3,20.43,8.48,-2.29,0.3,1.5,1.18,0.08,">1 nonsynonymous","L60F A67Y G152L",3
"lib1","SARS-CoV-2","TAGTCGTTAGCATTCA",1,17.58,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6S G101P",2
"lib1","SARS-CoV-2","TAGTCGTTATAAAAAT",2,11.27,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","F12G V52R I88R F99L P169R",5
"lib1","SARS-CoV-2","TAGTCTAACTAAATTT",4,10.3,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V52T I104V V180E",3
"lib1","SARS-CoV-2","TAGTCTAAGGCAGAAC",3,134.14,10.77,0,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTCTAAGTCTATAA",5,69.67,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T55S A67I Y91K C158G P169S",5
"lib1","SARS-CoV-2","TAGTCTACGTTCTCCC",1,12.42,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","V52S T63R Y121R",3
"lib1","SARS-CoV-2","TAGTCTACTCTACCCG",1,14.29,10.96,0.2,0.38,2.11,1,0.05,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","TAGTCTAGTAAACACC",7,8.63,6,-4.76,1.69,1.5,1.11,0.03,">1 nonsynonymous","A14G N157V",2
"lib1","SARS-CoV-2","TAGTCTAGTGACAACC",16,71.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C49G C61Y K132I I142T",4
"lib1","SARS-CoV-2","TAGTCTATAACCCAAA",6,211.2,6.9,-3.86,0.27,1.5,1.14,0.01,">1 nonsynonymous","Y39R Q176F",2
"lib1","SARS-CoV-2","TAGTCTATAATCACAA",2,83.22,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F134I G146P",2
"lib1","SARS-CoV-2","TAGTCTATGTAAGATA",2,30.61,10.83,0.07,0.08,2.96,1.04,0,">1 nonsynonymous","S113A N130T",2
"lib1","SARS-CoV-2","TAGTCTCACAGGACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61H S69G K87* S113K Y143F C158T K198N",7
"lib1","SARS-CoV-2","TAGTCTCACAGGATAT",1,12,7.16,-3.61,0.74,1.5,1.08,0.07,">1 nonsynonymous","K26T G101D L122S F156I L162V Q163K",6
"lib1","SARS-CoV-2","TAGTCTCTGGAACCTT",5,48.02,6.03,-4.73,1.19,1.5,1.24,0.02,">1 nonsynonymous","C6I C61L G74T E135G",4
"lib1","SARS-CoV-2","TAGTCTGAATAGAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","TAGTCTGCGCTAGCTT",1,32.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S41R L95V N107K Y159L",4
"lib1","SARS-CoV-2","TAGTCTGGGAATAAAT",7,16.48,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2T G101S Y119R S129R",4
"lib1","SARS-CoV-2","TAGTCTGTATAGGATT",5,120.56,10.08,-0.68,0.09,2.52,1.02,0,">1 nonsynonymous","P7Y V52A",2
"lib1","SARS-CoV-2","TAGTCTGTCGCCTCGC",5,136.3,10.7,-0.06,0.05,2.92,1.07,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TAGTCTTACGAAATGT",1,2.28,NA,NA,NA,NA,NA,NA,"stop","C6F V65T D112*",3
"lib1","SARS-CoV-2","TAGTCTTCATCTTCGG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","W23M N110*",2
"lib1","SARS-CoV-2","TAGTCTTCTTACTGGA",5,64.44,10.28,-0.48,0.05,2.82,1,0,">1 nonsynonymous","A14T A190V S200K",3
"lib1","SARS-CoV-2","TAGTGAAAAATACGCA",1,35.78,10.1,-0.66,0.08,2.61,1.01,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","TAGTGAAAAATTGAAT",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H A22P V65R G86F S184L",5
"lib1","SARS-CoV-2","TAGTGAAAACTAGAGA",1,53.64,10.28,-0.48,0.04,2.95,1,0,">1 nonsynonymous","Y39G F44G",2
"lib1","SARS-CoV-2","TAGTGAAACGCGACCC",1,36.62,6,-4.76,1.51,2.34,1.11,0,">1 nonsynonymous","F17W S29A C158L",3
"lib1","SARS-CoV-2","TAGTGAAAGAGCTTAA",3,50.12,10.06,-0.71,0.1,2.71,1.06,0.01,">1 nonsynonymous","T15G S53C",2
"lib1","SARS-CoV-2","TAGTGAACATGTCATT",2,15.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S19K S45F A89N",3
"lib1","SARS-CoV-2","TAGTGAAGTGGGGAAA",3,64.44,10.65,-0.11,0.05,2.94,1,0,">1 nonsynonymous","I28L E141W",2
"lib1","SARS-CoV-2","TAGTGAATACATGGGA",8,102.52,8.11,-2.66,0.14,1.51,1.1,0.01,">1 nonsynonymous","N1A D112S I138T",3
"lib1","SARS-CoV-2","TAGTGAATATCAAGAC",1,7.86,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","A18T D75T Y91M S164C G174P",5
"lib1","SARS-CoV-2","TAGTGAATTAACTAAA",6,149.3,10.16,-0.61,0.06,2.77,1.01,0,">1 nonsynonymous","A14N G155R L188V",3
"lib1","SARS-CoV-2","TAGTGAATTCGTCGAG",3,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q S69E",2
"lib1","SARS-CoV-2","TAGTGACACGTGCGTT",3,23.71,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I2V F12W N92M T100A S147I G155N",6
"lib1","SARS-CoV-2","TAGTGACGAAGTAGAT",14,134.76,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A33K L95T N107T Q168V G174T Y178L",6
"lib1","SARS-CoV-2","TAGTGAGATGTAATGG",2,36.26,6,-4.76,1.63,3,1.11,0,">1 nonsynonymous","S19V R27P Y35A I142L C150I",5
"lib1","SARS-CoV-2","TAGTGAGCTAGATCCC",2,75.22,9.57,-1.2,0.1,1.78,1.09,0,">1 nonsynonymous","Y39K A89M",2
"lib1","SARS-CoV-2","TAGTGAGTGCTATATC",13,170.16,9.33,-1.44,0.06,2.85,1.07,0,"1 nonsynonymous","E154F",1
"lib1","SARS-CoV-2","TAGTGATCAAATCGAT",1,11.72,8.94,-1.82,0.19,1.72,1.11,0.02,">1 nonsynonymous","S41L A67Y A105S G152K",4
"lib1","SARS-CoV-2","TAGTGATCTATCAAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","S41Y G155*",2
"lib1","SARS-CoV-2","TAGTGATTTATGTAAT",1,39.57,6,-4.76,1.44,1.5,1.16,0.01,">1 nonsynonymous","L60H P96S G172C",3
"lib1","SARS-CoV-2","TAGTGATTTCGATTAA",1,16.21,8.79,-1.97,0.23,1.57,1.34,0.03,">1 nonsynonymous","I2A T55C A105V G152Q",4
"lib1","SARS-CoV-2","TAGTGCAACAACAGGA",9,12.04,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T15C A145L V173P T201E",4
"lib1","SARS-CoV-2","TAGTGCAATAGCAGGT",9,57.94,10.78,0.02,0.07,2.92,1.07,0,">1 nonsynonymous","A18P N64V T148D",3
"lib1","SARS-CoV-2","TAGTGCAATGCTGGCA",6,0.88,NA,NA,NA,NA,NA,NA,"stop","A81* V153Y",2
"lib1","SARS-CoV-2","TAGTGCACATGGCAAA",8,130.41,9.82,-0.94,0.12,1.95,1.07,0.01,">1 nonsynonymous","G51L D97Y",2
"lib1","SARS-CoV-2","TAGTGCCATCAAACCT",2,47.82,9.64,-1.13,0.03,2.97,1.01,0,"1 nonsynonymous","Y119Q",1
"lib1","SARS-CoV-2","TAGTGCCCGATGGTGA",7,85.73,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17A G83L W106L",3
"lib1","SARS-CoV-2","TAGTGCCGAATGATAC",6,7.23,8.3,-2.47,0.29,2.26,1.12,0.03,">1 nonsynonymous","T15W A33T K56M G174W",4
"lib1","SARS-CoV-2","TAGTGCCGCTGGGATT",2,9.32,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5Q F12L N118T C158E F185K",5
"lib1","SARS-CoV-2","TAGTGCCGGGAATTAC",6,2.86,NA,NA,NA,NA,NA,NA,"stop","D59* V103R I142M P149R",4
"lib1","SARS-CoV-2","TAGTGCCGTCTAAAAT",6,129.61,10.43,-0.33,0.04,2.77,1.05,0,"1 nonsynonymous","Q144I",1
"lib1","SARS-CoV-2","TAGTGCGAGCTCTTCT",1,12.04,10.65,-0.11,0.12,2.95,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TAGTGCGCACTACTAA",4,115.76,7.1,-3.66,0.2,1.5,1.1,0.01,">1 nonsynonymous","G74D N107P",2
"lib1","SARS-CoV-2","TAGTGCGCGACCAGAA",6,6.11,NA,NA,NA,NA,NA,NA,"stop","G9* N58S",2
"lib1","SARS-CoV-2","TAGTGCTAGACTGCCT",3,31.77,10.52,-0.25,0.1,2.76,1,0,">1 nonsynonymous","D34S F160H",2
"lib1","SARS-CoV-2","TAGTGCTAGGACGAAT",6,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L P82W I104G",3
"lib1","SARS-CoV-2","TAGTGCTCATACTTTC",6,100.29,9.86,-0.91,0.17,1.74,1.11,0.01,">1 nonsynonymous","L38K A105S S164K",3
"lib1","SARS-CoV-2","TAGTGGCCGACCATAC",3,80.62,10.68,-0.08,0.07,2.84,1.12,0,"1 nonsynonymous","N120G",1
"lib1","SARS-CoV-2","TAGTGGCGTAATAGGA",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S W106E V180F",3
"lib1","SARS-CoV-2","TAGTGGGACAATCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17W Y35*",2
"lib1","SARS-CoV-2","TAGTGGGTAAGGACTT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y91S Y121* F167C",3
"lib1","SARS-CoV-2","TAGTGGTTCAAAGCCT",11,174.42,8.61,-2.16,0.1,2.32,1.12,0,">1 nonsynonymous","L5W Y35S S147K Y159F",4
"lib1","SARS-CoV-2","TAGTGTCATATAATGA",4,0.26,NA,NA,NA,NA,NA,NA,"stop","Y50P P96* K128W P149S",4
"lib1","SARS-CoV-2","TAGTGTTCACACAGAT",5,57.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35C I80M C150H F160I",4
"lib1","SARS-CoV-2","TAGTGTTCTGAATACA",2,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K L57A D137I R179P",4
"lib1","SARS-CoV-2","TAGTGTTTGGATAGAG",6,2.72,NA,NA,NA,NA,NA,NA,"stop","N40D C49G A81*",3
"lib1","SARS-CoV-2","TAGTTAAAAGAGTTTT",1,55.12,8.48,-2.29,0.14,3,1.02,0.01,"1 nonsynonymous","N157K",1
"lib1","SARS-CoV-2","TAGTTAAAAGTCTTAC",1,17.1,10.78,0.02,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTTAAAATCCTTAC",6,187.54,10.27,-0.49,0.02,2.86,1,0,"1 nonsynonymous","E10Y",1
"lib1","SARS-CoV-2","TAGTTAAACAATAAAT",4,27.38,6.15,-4.61,0.47,1.5,1.08,0.01,">1 nonsynonymous","Y39A V71E Q168R",3
"lib1","SARS-CoV-2","TAGTTAAACATAAAGC",8,40.57,8.41,-2.35,0.28,1.5,1.13,0.03,">1 nonsynonymous","S41E V103L",2
"lib1","SARS-CoV-2","TAGTTAAAGGTATGAA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","F8M F99V K114* R136I A145D N157F",6
"lib1","SARS-CoV-2","TAGTTAAAGTGATATA",5,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80P A89H D97N I104R",4
"lib1","SARS-CoV-2","TAGTTAAGACACCCCG",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E F62C L183S",3
"lib1","SARS-CoV-2","TAGTTAAGTTATAAAC",1,63.38,8.47,-2.29,0.2,2.36,1.13,0.01,">1 nonsynonymous","Y119V G174I",2
"lib1","SARS-CoV-2","TAGTTAATAACACAAG",2,44.02,10.81,0.04,0.06,2.84,1.06,0,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","TAGTTAATACTACATC",2,51.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A18S K87I N92L S129L",4
"lib1","SARS-CoV-2","TAGTTAATAGACGCCG",3,25.42,10.71,-0.05,0.08,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTTAATTACAATGC",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H I104G G155P P191R",4
"lib1","SARS-CoV-2","TAGTTAATTCCAGCTT",7,44.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D T46A V71Y V180S",4
"lib1","SARS-CoV-2","TAGTTACACGATACGA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","I88A P96* S113G N120G E141L L183K",6
"lib1","SARS-CoV-2","TAGTTACACTACTTTC",1,101,6,-4.76,1.4,1.5,1.16,0.01,">1 nonsynonymous","V52T L60G V71L V173S",4
"lib1","SARS-CoV-2","TAGTTACAGACAGTCT",1,12.98,10.32,-0.45,0.16,2.04,1.03,0.01,">1 nonsynonymous","Q84T W106R V115R",3
"lib1","SARS-CoV-2","TAGTTACCACTCAAAA",7,128.59,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L57C V71P P82H G117A R124E G166V K198R",7
"lib1","SARS-CoV-2","TAGTTACCAGCTCTTT",6,119.12,10.72,-0.04,0.05,2.9,1.06,0,">1 nonsynonymous","I2G E141K",2
"lib1","SARS-CoV-2","TAGTTACCATAACCTT",8,1.38,NA,NA,NA,NA,NA,NA,"stop","C158T G172*",2
"lib1","SARS-CoV-2","TAGTTACCGAGCTTGG",3,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D G51E G117M P149L",4
"lib1","SARS-CoV-2","TAGTTACTAGACAATA",2,52.62,10.37,-0.4,0.06,2.87,1.05,0,"1 nonsynonymous","L38W",1
"lib1","SARS-CoV-2","TAGTTACTCGCTGGGG",5,0.29,NA,NA,NA,NA,NA,NA,"stop","Y93* C102R N107K L122*",4
"lib1","SARS-CoV-2","TAGTTACTTTGACACT",4,72.34,10.12,-0.64,0.11,2.42,1.08,0.01,">1 nonsynonymous","T3I Y91I",2
"lib1","SARS-CoV-2","TAGTTAGAGTATCCTC",6,43.57,10.81,0.04,0.08,2.83,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTTAGCATGGTTGA",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G N107M L122V N130T V182A",5
"lib1","SARS-CoV-2","TAGTTAGCCACCAGGT",7,98.12,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S45C T63Q G83N S129L Y159L",5
"lib1","SARS-CoV-2","TAGTTAGCCATAGACC",1,51.02,10.33,-0.43,0.06,2.77,1.1,0,"1 nonsynonymous","T15I",1
"lib1","SARS-CoV-2","TAGTTAGTAGACTCCT",2,30.2,10.26,-0.51,0.07,2.78,1.02,0,"1 nonsynonymous","T15C",1
"lib1","SARS-CoV-2","TAGTTAGTATATATTC",1,10.22,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","P54H I88D K94A W106S V180A",5
"lib1","SARS-CoV-2","TAGTTAGTGATTTTGT",5,36.2,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","T100Y F167T",2
"lib1","SARS-CoV-2","TAGTTAGTTGTGTTAT",5,4.72,NA,NA,NA,NA,NA,NA,"stop","F99I P133D Q163*",3
"lib1","SARS-CoV-2","TAGTTATAACATTCAA",2,25.82,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","T85A N92L F167Y",3
"lib1","SARS-CoV-2","TAGTTATAACTGAGTA",1,55.01,9.77,-0.99,0.13,1.91,1.09,0.01,">1 nonsynonymous","S36F P133T",2
"lib1","SARS-CoV-2","TAGTTATAAGATGCTA",4,38.7,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","F167S",1
"lib1","SARS-CoV-2","TAGTTATAGAAGAACC",3,41.05,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C31L K94P",2
"lib1","SARS-CoV-2","TAGTTATAGCTTCCCA",4,22.5,6.2,-4.57,0.74,1.5,1.18,0.02,">1 nonsynonymous","I88M L95W N107R Y178S",4
"lib1","SARS-CoV-2","TAGTTATAGTTCATTC",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S A105S D112A G146W Q168S P197V",6
"lib1","SARS-CoV-2","TAGTTATATGTAAAAA",2,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L F126S V181N H189N",4
"lib1","SARS-CoV-2","TAGTTATCTTGTTTGC",2,71.47,10.65,-0.11,0.08,2.96,1.03,0,"1 nonsynonymous","E141G",1
"lib1","SARS-CoV-2","TAGTTATGCAGGAAAT",4,91.9,9.72,-1.04,0.08,2.39,1.07,0,">1 nonsynonymous","N40Q D97L G155I K198Y",4
"lib1","SARS-CoV-2","TAGTTATTGAACCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2R T85* L95P R124Y G146I",5
"lib1","SARS-CoV-2","TAGTTCAAACTAATCC",4,14.18,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","T15P Y35K G83R A105I V115A K128L P149Q",7
"lib1","SARS-CoV-2","TAGTTCAAATACAAAA",7,93.46,10.71,-0.05,0.04,2.93,1.04,0,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","TAGTTCAACTCATTCT",15,54.34,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F8C K26V P82T D97M R136G",5
"lib1","SARS-CoV-2","TAGTTCAAGAAAAGAT",3,32.55,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I2T N64A I80T P96S A145N",5
"lib1","SARS-CoV-2","TAGTTCAAGCAAGCCT",2,35.27,6.6,-4.16,0.28,1.5,1.14,0.01,">1 nonsynonymous","N40E C61A R179T",3
"lib1","SARS-CoV-2","TAGTTCAAGCTGAATG",6,71.61,9.85,-0.91,0.03,2.93,1.04,0,"1 nonsynonymous","Q168E",1
"lib1","SARS-CoV-2","TAGTTCAATGGGCTAC",12,6.69,NA,NA,NA,NA,NA,NA,"stop","E10R T85* F156C",3
"lib1","SARS-CoV-2","TAGTTCACAATATTGC",5,0.54,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TAGTTCACATAAGTCA",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K D75R G146E P161S",4
"lib1","SARS-CoV-2","TAGTTCAGACGATCCG",3,125.87,10.69,-0.07,0.05,2.9,1.03,0,">1 nonsynonymous","A18P A42R Y91K N110M",4
"lib1","SARS-CoV-2","TAGTTCAGTTGGAGCG",3,42.55,7.6,-3.17,0.13,1.79,1.15,0.01,">1 nonsynonymous","T3S T63V F99L P149G F156S",5
"lib1","SARS-CoV-2","TAGTTCCGACTAAGAG",3,23.77,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","F44T I80S K199N",3
"lib1","SARS-CoV-2","TAGTTCGAAATTTGTA",5,27.31,7.37,-3.39,0.25,1.5,1.12,0.01,">1 nonsynonymous","L5A A22K D34R S41V F126T",5
"lib1","SARS-CoV-2","TAGTTCGAAGAAATGA",3,55.76,6.07,-4.7,0.77,1.5,1.13,0.01,">1 nonsynonymous","V20E C31P S43N G83C",4
"lib1","SARS-CoV-2","TAGTTCGACACGGACA",5,98.89,9.19,-1.57,0.08,2.73,1.15,0,"1 nonsynonymous","Q176S",1
"lib1","SARS-CoV-2","TAGTTCGCAGCTAGTA",1,57.98,10.68,-0.09,0.07,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TAGTTCGTAGGACAGC",3,15.11,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42F P82C C158A",3
"lib1","SARS-CoV-2","TAGTTCGTTAAGGCCT",1,39.12,8.32,-2.45,0.26,1.54,1.13,0.03,"1 nonsynonymous","D137M",1
"lib1","SARS-CoV-2","TAGTTCTGCTCCCCAG",4,141.84,6.2,-4.57,0.82,1.5,1.21,0.02,">1 nonsynonymous","Y91C T148N G155F",3
"lib1","SARS-CoV-2","TAGTTCTGCTGAGTAA",5,32.49,9.94,-0.82,0.19,1.54,1.15,0.02,">1 nonsynonymous","P7L T100D V173I",3
"lib1","SARS-CoV-2","TAGTTCTGTCTAAATC",6,45.26,10.42,-0.34,0.06,2.88,1.04,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","TAGTTCTTCCTCCAAC",1,9.25,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","Y35L R73G T85L D137M Q163Y Y178R",6
"lib1","SARS-CoV-2","TAGTTCTTTCATATCT",2,12.32,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D34H C49R K128F",3
"lib1","SARS-CoV-2","TAGTTCTTTCTCGGAT",3,5.5,NA,NA,NA,NA,NA,NA,"stop","S41C C61T G86E S184L P191* C195I",6
"lib1","SARS-CoV-2","TAGTTGAAGCAATATA",3,0.94,NA,NA,NA,NA,NA,NA,"stop","L60N D97F C158*",3
"lib1","SARS-CoV-2","TAGTTGAATCCATGTG",4,29.65,6.03,-4.73,1.26,1.5,1.27,0.04,">1 nonsynonymous","A14L F70M A81S Q168T",4
"lib1","SARS-CoV-2","TAGTTGACCTATAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","S36* L57I T201N",3
"lib1","SARS-CoV-2","TAGTTGCAGTCAGGAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","L125*",1
"lib1","SARS-CoV-2","TAGTTGCCAGTCAGGT",6,44.32,10.05,-0.72,0.1,2.5,1,0,"1 nonsynonymous","V11A",1
"lib1","SARS-CoV-2","TAGTTGCGCATTGCAT",1,16.18,10.8,0.04,0.06,2.96,1,0,">1 nonsynonymous","V37G C61E",2
"lib1","SARS-CoV-2","TAGTTGGTAACCATTG",1,18.99,10.1,-0.66,0.21,1.95,1.12,0.02,">1 nonsynonymous","I2R L38K",2
"lib1","SARS-CoV-2","TAGTTGGTGAAACTAT",4,10.84,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V11K S45Y L57Q S113F",4
"lib1","SARS-CoV-2","TAGTTGTCCAATCAAA",5,41.18,6.27,-4.49,0.64,1.5,1.21,0.02,">1 nonsynonymous","F8R N64C S200N",3
"lib1","SARS-CoV-2","TAGTTGTCGACTTTGA",1,13.3,10.79,0.03,0.11,2.9,1.01,0,">1 nonsynonymous","T3D V11L",2
"lib1","SARS-CoV-2","TAGTTGTGCTCATTGA",6,146.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10Y N157T Q176V",3
"lib1","SARS-CoV-2","TAGTTGTGGCCTATCT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N64L L95G T201P",4
"lib1","SARS-CoV-2","TAGTTGTGTATGATAC",8,35.61,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","TAGTTTAACCAATAAA",4,40.82,10.35,-0.42,0.03,2.89,1.01,0,">1 nonsynonymous","G9S Y91M D98T S147P",4
"lib1","SARS-CoV-2","TAGTTTAACCTAAGAA",4,60.56,10.35,-0.41,0.05,2.81,1.05,0,">1 nonsynonymous","D97L G116L T148I",3
"lib1","SARS-CoV-2","TAGTTTAACGACCAAC",1,37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86T R127L",2
"lib1","SARS-CoV-2","TAGTTTAAGAGGTTGC",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T201S",2
"lib1","SARS-CoV-2","TAGTTTAATTAATAGA",8,50.82,6,-4.76,1.53,1.5,1.12,0.01,">1 nonsynonymous","C6G R127W T140S",3
"lib1","SARS-CoV-2","TAGTTTACCACAGAAG",1,9.04,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","A18R I28T E135A G152S",4
"lib1","SARS-CoV-2","TAGTTTACTGAATTAA",5,28.89,6,-4.76,1.87,1.5,1.16,0.02,">1 nonsynonymous","P7N V37L I104Q V115W F167N",5
"lib1","SARS-CoV-2","TAGTTTACTTTCTTAT",3,84,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6Q V11I Y35T D90V D97I P177V",6
"lib1","SARS-CoV-2","TAGTTTAGAATTTAGA",2,21.67,10.46,-0.3,0.05,2.86,1.07,0,"1 nonsynonymous","N30L",1
"lib1","SARS-CoV-2","TAGTTTAGACCACCTT",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L R16I G86F Y91I K199Y",5
"lib1","SARS-CoV-2","TAGTTTAGACTTATGT",4,0,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib1","SARS-CoV-2","TAGTTTATCACGAAAA",9,91.67,8.45,-2.32,0.31,1.5,1,0.04,">1 nonsynonymous","V37S T63P S69A D90K",4
"lib1","SARS-CoV-2","TAGTTTATGAATAGAC",3,219.09,8.7,-2.07,0.09,2.34,1.06,0,">1 nonsynonymous","N107P Q176C",2
"lib1","SARS-CoV-2","TAGTTTATTATGCATT",2,62.92,10.68,-0.08,0.05,2.88,1.05,0,">1 nonsynonymous","T55Y I138R",2
"lib1","SARS-CoV-2","TAGTTTATTTATGCTG",5,56.58,8.32,-2.44,0.29,1.5,1.04,0.04,">1 nonsynonymous","G9A Y50N H189Y",3
"lib1","SARS-CoV-2","TAGTTTCACTAGACCT",6,46.79,6.35,-4.41,0.57,1.5,1.19,0.02,">1 nonsynonymous","C31R I88L E141N",3
"lib1","SARS-CoV-2","TAGTTTCCCTAATTAT",3,16.5,9.67,-1.09,0.29,1.5,1,0.04,">1 nonsynonymous","V11N P161A",2
"lib1","SARS-CoV-2","TAGTTTCGAAACGATT",4,10.21,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y21C R127S K199C",3
"lib1","SARS-CoV-2","TAGTTTCGAACCATCT",11,104.24,10.22,-0.55,0.05,2.77,1.01,0,">1 nonsynonymous","N64D E135R P197T",3
"lib1","SARS-CoV-2","TAGTTTCGTAGCTGTA",4,0.06,NA,NA,NA,NA,NA,NA,"stop","V71* K94D V153* T201L",4
"lib1","SARS-CoV-2","TAGTTTCTAGACAGCC",1,29.19,10.88,0.11,0.08,2.97,1,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","TAGTTTCTTACCCTAG",2,18.2,10.73,-0.03,0.06,2.89,1.08,0,">1 nonsynonymous","V103I S129N",2
"lib1","SARS-CoV-2","TAGTTTGAGAGCACGC",11,1.65,NA,NA,NA,NA,NA,NA,"stop","S41T C102* Q144H",3
"lib1","SARS-CoV-2","TAGTTTGCAATGAGGG",2,8.73,10.39,-0.37,0.19,2.92,1,0.02,">1 nonsynonymous","Y35F F44Y A81E D97G",4
"lib1","SARS-CoV-2","TAGTTTGCACTACCCA",8,18.75,7.71,-3.05,0.41,1.5,1,0.08,">1 nonsynonymous","I2R K87E F99E Y159S",4
"lib1","SARS-CoV-2","TAGTTTGCGGGTAAAA",4,122.68,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G117K Q176D",2
"lib1","SARS-CoV-2","TAGTTTGGACACTAAT",4,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P V77I T201R",3
"lib1","SARS-CoV-2","TAGTTTGTACTGAAAG",4,77.46,10.19,-0.57,0.05,2.85,1,0,">1 nonsynonymous","G116S L131M",2
"lib1","SARS-CoV-2","TAGTTTTAACGAGTAT",1,5.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13I A22M A89S G172C",4
"lib1","SARS-CoV-2","TAGTTTTAGGAAAAGT",6,45.99,10.79,0.02,0.05,2.96,1,0,">1 nonsynonymous","S147L Q163M",2
"lib1","SARS-CoV-2","TAGTTTTATAAGGCAA",5,41.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P96C V103R N107R A145L Q176R",5
"lib1","SARS-CoV-2","TAGTTTTGCTATTCCC",4,16.78,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","A89G L95W",2
"lib1","SARS-CoV-2","TAGTTTTTACATCCGA",2,27.62,7.87,-2.9,0.2,1.5,1.1,0.02,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","TAGTTTTTCAAGAATA",6,29.51,10.25,-0.51,0.11,2.82,1.1,0.01,">1 nonsynonymous","F47V N151A",2
"lib1","SARS-CoV-2","TATAAAAAACAAACAA",1,26.33,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12S D59L L122M C150T C195G",5
"lib1","SARS-CoV-2","TATAAAAAACATGAAG",1,7.19,NA,NA,NA,NA,NA,0.23,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","TATAAAAAATCATAAA",3,50.46,9.05,-1.71,0.18,1.5,1.12,0.01,">1 nonsynonymous","S36F D98Y G152C",3
"lib1","SARS-CoV-2","TATAAAAACACTCCCC",4,57.67,9.19,-1.57,0.18,1.55,1.16,0.02,">1 nonsynonymous","F44T D98I T148C",3
"lib1","SARS-CoV-2","TATAAAAACCACCGAA",12,266.83,9.84,-0.93,0.07,2.38,1.04,0,">1 nonsynonymous","A89N V173Q",2
"lib1","SARS-CoV-2","TATAAAAACCCAACGA",2,1.26,NA,NA,NA,NA,NA,NA,"stop","G86K I104*",2
"lib1","SARS-CoV-2","TATAAAAACGCTAGCG",1,13.15,10.87,0.11,0.1,2.86,1.08,0.01,">1 nonsynonymous","L122S S129C",2
"lib1","SARS-CoV-2","TATAAAAACGGTCATC",9,1.89,NA,NA,NA,NA,NA,NA,"stop","N30A A42M V52W N107R K114S E141*",6
"lib1","SARS-CoV-2","TATAAAAAGCACGCAG",1,10.89,6.14,-4.62,1.47,1.5,1.16,0.07,">1 nonsynonymous","G9P C49S Y66H A81L W106L E141A C158A Y165V",8
"lib1","SARS-CoV-2","TATAAAAAGCTATGCA",4,102.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N13I G86L L122N T201D",4
"lib1","SARS-CoV-2","TATAAAAAGGGAAACG",5,71.05,10.66,-0.11,0.04,2.91,1.05,0,"1 nonsynonymous","V173C",1
"lib1","SARS-CoV-2","TATAAAAAGTTCTTAA",4,53.95,10.53,-0.23,0.08,2.88,1.01,0,">1 nonsynonymous","K128I Q144E",2
"lib1","SARS-CoV-2","TATAAAAATGTGACGT",1,14.42,10.02,-0.74,0.19,2.06,1.04,0.01,">1 nonsynonymous","Q84F R136H",2
"lib1","SARS-CoV-2","TATAAAAATTGCCTAC",5,18.43,10.87,0.11,0.09,2.85,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TATAAAACAAAACAAA",2,60.73,10.11,-0.66,0.04,2.93,1,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","TATAAAACAAGAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119T Q176*",3
"lib1","SARS-CoV-2","TATAAAACACAAATAG",3,1.81,NA,NA,NA,NA,NA,NA,"stop","G51I E141W G172*",3
"lib1","SARS-CoV-2","TATAAAACATAGTCGA",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88M D97C",2
"lib1","SARS-CoV-2","TATAAAACCCCTATTA",3,22.24,10.79,0.03,0.1,2.88,1.02,0.01,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","TATAAAACCGGCTTCA",1,76.17,9.41,-1.36,0.07,2.81,1.12,0,">1 nonsynonymous","K26A K87D T201R",3
"lib1","SARS-CoV-2","TATAAAACGCTCGATG",1,40.07,6,-4.76,2,1.5,1.37,0.04,">1 nonsynonymous","G51C F167Y",2
"lib1","SARS-CoV-2","TATAAAACTAGCCGTC",9,83.92,10.82,0.05,0.07,2.98,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAAACTTTTAATA",4,51.75,6.37,-4.39,0.48,1.5,1.2,0.01,">1 nonsynonymous","G86N Q168L",2
"lib1","SARS-CoV-2","TATAAAAGAGAAAGAG",1,71.64,6.17,-4.6,0.45,1.5,1.14,0.01,">1 nonsynonymous","T3V F17C V37C S43Y N107K Y165C Y178V",7
"lib1","SARS-CoV-2","TATAAAAGAGCAAAAT",3,67.31,10.6,-0.16,0.06,2.84,1.03,0,">1 nonsynonymous","S43L P54M P149R S164Y",4
"lib1","SARS-CoV-2","TATAAAAGATTTCTCG",5,27.37,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C49T F70D",2
"lib1","SARS-CoV-2","TATAAAAGGAACGCGG",4,1.26,NA,NA,NA,NA,NA,NA,"stop","R27L S45I C61* E141N",4
"lib1","SARS-CoV-2","TATAAAAGTAATGCTT",8,96.83,10.84,0.07,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAAAGTACACAAA",1,13.74,10.54,-0.22,0.13,2.9,1.08,0.01,">1 nonsynonymous","R27A A42T",2
"lib1","SARS-CoV-2","TATAAAAGTCGACCCA",1,65.34,10.43,-0.33,0.09,2.72,1.09,0,">1 nonsynonymous","D97M G152Y",2
"lib1","SARS-CoV-2","TATAAAATAAAAATAT",3,80.18,10.17,-0.59,0.06,2.7,1.04,0,">1 nonsynonymous","N4I V32W N40Y Q84K L122K",5
"lib1","SARS-CoV-2","TATAAAATAAAGGCAA",5,70.93,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64L V77S Y91N L122I C150S",5
"lib1","SARS-CoV-2","TATAAAATAATTGCAA",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F W106R C150S",3
"lib1","SARS-CoV-2","TATAAAATATAAAACA",3,2.32,NA,NA,NA,NA,NA,NA,"stop","A42L W106* F160S S184G",4
"lib1","SARS-CoV-2","TATAAAATATTGGTAG",5,3.36,NA,NA,NA,NA,NA,NA,"stop","N1* L95S G117P G174E",4
"lib1","SARS-CoV-2","TATAAAATCATCACAA",3,10.35,9.87,-0.89,0.25,1.5,1.15,0.03,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","TATAAAATCGCACCTA",4,41.82,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S69E D98C W106V",3
"lib1","SARS-CoV-2","TATAAAATCTCAAACC",6,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A N130K",2
"lib1","SARS-CoV-2","TATAAAATCTGTGTTA",3,48.74,9.37,-1.4,0.29,1.5,1.05,0.03,">1 nonsynonymous","N58T Q79R T148G Q168W",4
"lib1","SARS-CoV-2","TATAAAATTAACATAG",7,104.17,10.62,-0.15,0.04,2.94,1.02,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","TATAAAATTATAAACA",7,66.73,8.32,-2.44,0.16,1.63,1.22,0.01,">1 nonsynonymous","P7L Q84F G155A C195W",4
"lib1","SARS-CoV-2","TATAAAATTATCATAT",5,22.5,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L5I V11C L60K G146K",4
"lib1","SARS-CoV-2","TATAAAATTATGAAAC",7,129.21,9.5,-1.26,0.16,1.78,1.15,0.01,">1 nonsynonymous","I28L A33R D90T E154S",4
"lib1","SARS-CoV-2","TATAAAATTGACAATA",3,25,6.93,-3.84,0.18,1.54,1.08,0.01,">1 nonsynonymous","T3E F99N Q144L Y175E",4
"lib1","SARS-CoV-2","TATAAACAATTCGCGA",3,9.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S45G G101H K114I F126L",4
"lib1","SARS-CoV-2","TATAAACACAACAGCA",4,116.03,10.72,-0.04,0.04,2.93,1.02,0,"1 nonsynonymous","A22R",1
"lib1","SARS-CoV-2","TATAAACATACCATCG",2,22.02,6.9,-3.86,0.44,1.5,1.05,0.05,">1 nonsynonymous","K48A P96R G166F",3
"lib1","SARS-CoV-2","TATAAACATCCTGCGT",10,4.23,NA,NA,NA,NA,NA,NA,"stop","N4K R124*",2
"lib1","SARS-CoV-2","TATAAACATCTAGTGG",1,3.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","TATAAACATCTATAAG",2,0.66,NA,NA,NA,NA,NA,NA,"stop","N1M E10F D98L N120I S139N Q176*",6
"lib1","SARS-CoV-2","TATAAACATTTCATAA",2,83.04,10.08,-0.69,0.04,2.89,1.04,0,"1 nonsynonymous","I142W",1
"lib1","SARS-CoV-2","TATAAACCCAACAATA",4,17.98,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","K56R T85N P96R R136S",4
"lib1","SARS-CoV-2","TATAAACCCATATATC",3,79.75,10.72,-0.05,0.06,2.92,1.04,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","TATAAACCGATGTAAC",3,5.3,8.9,-1.86,0.28,1.58,1.1,0.02,">1 nonsynonymous","G9A Y50K",2
"lib1","SARS-CoV-2","TATAAACCTACGAACT",2,10.1,10.78,0.02,0.1,2.96,1.05,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TATAAACGCGCTAGAG",6,15.45,6.72,-4.04,0.73,1.5,1.31,0.07,">1 nonsynonymous","T3W A14L D34R C49H C61M S113Q Y119C",7
"lib1","SARS-CoV-2","TATAAACGGACGCGCC",5,94.92,8.69,-2.07,0.06,2.12,1.15,0,">1 nonsynonymous","F12G I28F Y119R",3
"lib1","SARS-CoV-2","TATAAACGTAAAACTC",6,16.75,6,-4.76,2,3,1.04,0.01,">1 nonsynonymous","S19K L60Y Y123D",3
"lib1","SARS-CoV-2","TATAAACGTTTTGAAG",1,36.64,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S43L C61R S113I E135S P197G",5
"lib1","SARS-CoV-2","TATAAACTACAAAGCA",4,5.26,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","N13H L38Y A89C D112E G152K",5
"lib1","SARS-CoV-2","TATAAACTATATAATT",1,9.69,10.87,0.1,0.13,2.97,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATAAACTCTGAACAT",6,100.78,9.95,-0.81,0.08,2.24,1.06,0,">1 nonsynonymous","D34R E141M",2
"lib1","SARS-CoV-2","TATAAACTGTTTCCGA",3,68.83,10.49,-0.27,0.06,2.93,1.02,0,">1 nonsynonymous","K114L K128V",2
"lib1","SARS-CoV-2","TATAAACTTTAACCAA",5,76.57,10,-0.77,0.07,2.82,1.03,0,">1 nonsynonymous","P149W F156M",2
"lib1","SARS-CoV-2","TATAAAGAAGCTCTGG",2,28.04,10.81,0.04,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAAGCCTAATAAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","E10L L60* L95K",3
"lib1","SARS-CoV-2","TATAAAGGCTTTTAGT",9,130.26,10.67,-0.1,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAAGGTTCATAAG",2,137.14,9.67,-1.09,0.1,2.15,1.06,0,">1 nonsynonymous","T85L N120F F126L",3
"lib1","SARS-CoV-2","TATAAAGTCTAAACTA",5,56.46,9.43,-1.34,0.07,2.77,1.14,0,">1 nonsynonymous","E154Y T201S",2
"lib1","SARS-CoV-2","TATAAAGTGGTTGTCT",6,37.01,9.97,-0.8,0.08,2.78,1.1,0,"1 nonsynonymous","N118V",1
"lib1","SARS-CoV-2","TATAAAGTTCACATTA",2,3.16,NA,NA,NA,NA,NA,NA,"stop","T15A C31* V103E E135P",4
"lib1","SARS-CoV-2","TATAAAGTTTCAAAAT",1,9.45,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","C102S K114V T170Y",3
"lib1","SARS-CoV-2","TATAAATAAATTTCAC",13,92.99,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N40T K87M D112N G146S",4
"lib1","SARS-CoV-2","TATAAATACTGTACCA",5,45.11,10.5,-0.27,0.06,2.83,1.01,0,">1 nonsynonymous","D98G L122N T148I",3
"lib1","SARS-CoV-2","TATAAATAGTTGAACA",2,13.94,6.96,-3.81,0.56,1.5,1.1,0.07,">1 nonsynonymous","C6G S41V A81P T170S",4
"lib1","SARS-CoV-2","TATAAATATCCCTGTT",2,27.2,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","TATAAATATCTGGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","P82L P149*",2
"lib1","SARS-CoV-2","TATAAATATGCAACAT",3,24.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6P N107L I142L S164R",4
"lib1","SARS-CoV-2","TATAAATATGGACCGG",3,56.38,10.84,0.07,0.11,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TATAAATCAGACATAA",1,6.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P S53I W106E K198C",4
"lib1","SARS-CoV-2","TATAAATCGCACATAC",3,44.85,10.62,-0.14,0.08,2.9,1.06,0,"1 nonsynonymous","S147A",1
"lib1","SARS-CoV-2","TATAAATCGCGCAACG",1,25.19,9.97,-0.8,0.04,2.9,1.03,0,">1 nonsynonymous","G9S Q144D G155E",3
"lib1","SARS-CoV-2","TATAAATCTAAATCTA",6,122.72,8.65,-2.11,0.13,1.5,1.15,0.01,">1 nonsynonymous","G9Y N120D K132R T148A P169S V173S",6
"lib1","SARS-CoV-2","TATAAATCTCAACATT",5,23.48,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","C49L N118R S139I G146R F160D",5
"lib1","SARS-CoV-2","TATAAATCTCCCTAAC",1,57.48,10.74,-0.02,0.08,2.89,1.04,0,">1 nonsynonymous","D98N K128F",2
"lib1","SARS-CoV-2","TATAAATGAAATCTTG",1,12.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28V L60P N92A",3
"lib1","SARS-CoV-2","TATAAATGGAACATAG",4,29.18,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A33P A81C D112K",3
"lib1","SARS-CoV-2","TATAAATTCAAGTAAT",3,28.04,9.58,-1.19,0.19,1.75,1.11,0.02,">1 nonsynonymous","D98R F134A P149Y",3
"lib1","SARS-CoV-2","TATAAATTGATCGAAT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D97Y K114R I138R",4
"lib1","SARS-CoV-2","TATAAATTGCAGTTAA",3,9.38,7.32,-3.44,0.44,1.69,1.08,0.05,">1 nonsynonymous","V77W F99Y Y119P G166T",4
"lib1","SARS-CoV-2","TATAACAAAAGATTCC",4,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T I88S V103Q V173A",4
"lib1","SARS-CoV-2","TATAACAAACCACAAT",7,36.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88N W106A",2
"lib1","SARS-CoV-2","TATAACAAAGGTCGCA",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L C102K",2
"lib1","SARS-CoV-2","TATAACAATAAAGTAG",6,24.72,6,-4.76,2,3,1.26,0,">1 nonsynonymous","V77M F99L S113L",3
"lib1","SARS-CoV-2","TATAACAATGTAATAG",4,17.61,10.77,0.01,0.11,2.93,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATAACACAAGTACTA",3,59.53,9.9,-0.86,0.11,2.53,1.06,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TATAACACCGTATGTG",1,6.35,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A14W L57M S108P D112A",4
"lib1","SARS-CoV-2","TATAACACTAACTAAT",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A A22W F62V D75P G83L F99V L125P",7
"lib1","SARS-CoV-2","TATAACACTGGGAGTT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","F44T Y143* P149V Y159W",4
"lib1","SARS-CoV-2","TATAACAGACAAAATA",1,11.27,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","G9L Y93C G155H",3
"lib1","SARS-CoV-2","TATAACAGACAATGCC",4,7.77,6.34,-4.42,0.61,1.5,1.08,0.03,">1 nonsynonymous","A14Y C49V W106Q",3
"lib1","SARS-CoV-2","TATAACAGATGATAAC",8,72.77,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G86R Y93N P149I",3
"lib1","SARS-CoV-2","TATAACAGGTTATGCA",1,18.09,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L38I Y50N D68R V77G R136T T148P",6
"lib1","SARS-CoV-2","TATAACAGGTTCATTA",8,322.34,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39L Y91D A105W P177T",4
"lib1","SARS-CoV-2","TATAACATAAATGCTA",4,108.65,10.29,-0.47,0.05,2.81,1.01,0,">1 nonsynonymous","K26V F134I",2
"lib1","SARS-CoV-2","TATAACATAGGCAACA",3,6.91,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","Y50S N107L",2
"lib1","SARS-CoV-2","TATAACATTTATTGAC",5,54.98,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","F8S N107V F126M Y165Q",4
"lib1","SARS-CoV-2","TATAACCACGTAGAAC",2,41.66,10.67,-0.09,0.06,2.95,1,0,">1 nonsynonymous","T63V I142L",2
"lib1","SARS-CoV-2","TATAACCAGTCAACTA",3,23.89,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C31P A42D K132M G155H F167K G174L",6
"lib1","SARS-CoV-2","TATAACCATGAAGAAA",5,138.55,10.65,-0.11,0.04,2.94,1,0,">1 nonsynonymous","L5G S41Q",2
"lib1","SARS-CoV-2","TATAACCATGATAGGC",1,44.41,10.17,-0.59,0.07,2.77,1,0,"1 nonsynonymous","Y123T",1
"lib1","SARS-CoV-2","TATAACCCCTAAGGCG",5,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46P G86V Y121R V182R",4
"lib1","SARS-CoV-2","TATAACCCGCTGACAG",2,58.66,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N4C W106K L125R L162V T201N",5
"lib1","SARS-CoV-2","TATAACCGGCACTCGC",7,63.52,8.57,-2.2,0.29,1.51,1.17,0.03,">1 nonsynonymous","W23F N120R Y165H",3
"lib1","SARS-CoV-2","TATAACCGTGCCAGTG",1,23.56,6,-4.76,2,1.5,1.1,0.02,"1 nonsynonymous","G101N",1
"lib1","SARS-CoV-2","TATAACGAATAGTGAC",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M K114L",2
"lib1","SARS-CoV-2","TATAACGATGAGTTGT",3,13.13,10.01,-0.75,0.12,1.97,1.04,0.01,">1 nonsynonymous","T3G P82R P197V",3
"lib1","SARS-CoV-2","TATAACGGCCACATAT",2,46.68,10.62,-0.14,0.05,2.9,1.02,0,">1 nonsynonymous","S41N E135H",2
"lib1","SARS-CoV-2","TATAACGGTAGCCGAG",2,61.09,10.25,-0.52,0.05,2.87,1.02,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","TATAACGTAATAAAAC",6,40.62,8.85,-1.92,0.1,1.5,1.09,0.01,">1 nonsynonymous","K56T E154M F185K",3
"lib1","SARS-CoV-2","TATAACGTGTGTTGCT",1,6.75,6.54,-4.23,2,3,1.25,0,">1 nonsynonymous","C6S A33C S43A R73F",4
"lib1","SARS-CoV-2","TATAACGTTAGATATC",5,70.63,10.39,-0.38,0.06,2.84,1.03,0,">1 nonsynonymous","F62A G116V",2
"lib1","SARS-CoV-2","TATAACGTTTAACACG",1,6.11,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A14F Y35W F62L Y66A N107S E154C S184G",7
"lib1","SARS-CoV-2","TATAACTAACCCGCAC",2,64.38,10.26,-0.5,0.05,2.8,1.08,0,">1 nonsynonymous","N130F N151I",2
"lib1","SARS-CoV-2","TATAACTAGAGGAGTA",8,55.49,10.82,0.05,0.07,2.93,1.04,0,"1 nonsynonymous","K56H",1
"lib1","SARS-CoV-2","TATAACTATAATAAGT",1,7.96,8.21,-2.55,0.16,1.89,1.06,0.01,">1 nonsynonymous","F44R S139Y",2
"lib1","SARS-CoV-2","TATAACTCGTAGGTAG",1,33.67,8.55,-2.21,0.14,2.77,1.16,0.01,">1 nonsynonymous","K114R G166D",2
"lib1","SARS-CoV-2","TATAACTTACAGCTTA",2,18.38,9.23,-1.53,0.17,1.75,1.11,0.02,">1 nonsynonymous","Q79T T85L",2
"lib1","SARS-CoV-2","TATAACTTATGCGTTG",1,18.98,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","Y35C S41F Q84L D112E",4
"lib1","SARS-CoV-2","TATAACTTCTCACTAA",6,162.04,8.68,-2.08,0.09,2.87,1.07,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","TATAACTTTAAACGTG",6,29.53,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V20E G83C A190Y",3
"lib1","SARS-CoV-2","TATAACTTTCGATGGA",11,231.24,9.54,-1.22,0.07,2.68,1.08,0,">1 nonsynonymous","N13T N151S F156L",3
"lib1","SARS-CoV-2","TATAAGAAAAATGATA",3,40.64,10.59,-0.18,0.03,2.92,1.01,0,">1 nonsynonymous","E10T T148A",2
"lib1","SARS-CoV-2","TATAAGAAAACATAAT",7,3.74,NA,NA,NA,NA,NA,NA,"stop","N13T N24*",2
"lib1","SARS-CoV-2","TATAAGAAAACCCTTC",2,18.4,10.16,-0.6,0.16,2.43,1.03,0.01,">1 nonsynonymous","D75F P96S",2
"lib1","SARS-CoV-2","TATAAGAAAACGCAAA",4,21.71,10.54,-0.22,0.08,2.97,1.02,0,">1 nonsynonymous","K56C T140K",2
"lib1","SARS-CoV-2","TATAAGAAAATTCCTT",17,104.4,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T63Y K87A L95P",3
"lib1","SARS-CoV-2","TATAAGAAATTGTTGG",1,22.47,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N40T I88R F167A",3
"lib1","SARS-CoV-2","TATAAGAACCACTCTA",5,29.41,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V103Y D112R K132V G172A",4
"lib1","SARS-CoV-2","TATAAGAATCGGTTAC",7,4.46,NA,NA,NA,NA,NA,NA,"stop","Y66* I88R K132R S139Q Y178H",5
"lib1","SARS-CoV-2","TATAAGAATGGGTAGA",2,9.44,6.29,-4.47,0.54,3,1,0.02,">1 nonsynonymous","A67P G116Y K128T",3
"lib1","SARS-CoV-2","TATAAGAATTAGAAAA",5,110.19,10.7,-0.07,0.04,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAGAATTATGAGA",8,18.38,7.16,-3.6,0.55,1.5,1.34,0.07,">1 nonsynonymous","N13T I28R N40Q K87R N92V G172V",6
"lib1","SARS-CoV-2","TATAAGACAAACGAAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T3R I88* W106M K128Q Y143L T201S",6
"lib1","SARS-CoV-2","TATAAGACGCCAAATT",4,46.51,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F12P I28P Y50N N92C P149H N171G",6
"lib1","SARS-CoV-2","TATAAGACTAAACTGA",1,8.23,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","F8Y F12T P54V S69E T100N N109Y F156T Y165A",8
"lib1","SARS-CoV-2","TATAAGAGCCCCGCCA",5,60.95,8.82,-1.94,0.2,1.65,1.2,0.02,">1 nonsynonymous","N64S K128Y Y178S P191M K198V",5
"lib1","SARS-CoV-2","TATAAGATAACTAGTC",2,57.72,10.73,-0.03,0.07,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAGATACCAGAAC",5,102.32,9.76,-1,0.05,2.79,1.07,0,">1 nonsynonymous","T15I G166A",2
"lib1","SARS-CoV-2","TATAAGATATTACCTA",6,24.91,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","A89S N107L G146R",3
"lib1","SARS-CoV-2","TATAAGATGAACGCAT",6,37.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5R S45L C49H K114T D137K Q144S",6
"lib1","SARS-CoV-2","TATAAGATGACGCGGT",3,8.56,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D59E V181S",2
"lib1","SARS-CoV-2","TATAAGATGCATGCTA",5,121.2,9.69,-1.07,0.09,2.35,1.08,0,">1 nonsynonymous","N13F E154C",2
"lib1","SARS-CoV-2","TATAAGATTGCTATCA",4,1.78,NA,NA,NA,NA,NA,NA,"stop","D59* N64W D90R Y123D L131V Y159L T201G",7
"lib1","SARS-CoV-2","TATAAGCAAACCACAA",1,62.51,10.69,-0.08,0.05,2.88,1.07,0,">1 nonsynonymous","I142M S147V",2
"lib1","SARS-CoV-2","TATAAGCACGAAATGT",4,35.45,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","V37P C49Y D59R",3
"lib1","SARS-CoV-2","TATAAGCACGCAAACC",1,46.73,10.27,-0.49,0.07,2.79,1,0,"1 nonsynonymous","P133T",1
"lib1","SARS-CoV-2","TATAAGCATAAAGAGA",2,32.38,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I72F A81V",2
"lib1","SARS-CoV-2","TATAAGCATGCACTGC",7,114.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8H R16T Y35K N120R",4
"lib1","SARS-CoV-2","TATAAGCCAGTAAAAA",5,15.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V C49L T140K N157L",4
"lib1","SARS-CoV-2","TATAAGCCCTTATACC",1,34.79,10.55,-0.21,0.06,2.97,1,0,">1 nonsynonymous","F44D C61R",2
"lib1","SARS-CoV-2","TATAAGCCGACCGATA",1,23.4,10.82,0.05,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAAGCGGCCATTAA",2,17.96,8.42,-2.35,0.28,1.62,1.26,0.03,">1 nonsynonymous","G9C S43W F62L K94A",4
"lib1","SARS-CoV-2","TATAAGCTAGGTAGCC",5,51.21,6.27,-4.49,0.44,3,1.2,0.01,">1 nonsynonymous","I88S G174T",2
"lib1","SARS-CoV-2","TATAAGCTCAATCGGT",4,33.36,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5I I80P G101R",3
"lib1","SARS-CoV-2","TATAAGCTCCTCGTAA",1,40.27,10.63,-0.14,0.04,2.99,1,0,">1 nonsynonymous","S53F S200L",2
"lib1","SARS-CoV-2","TATAAGCTGACAGTCA",8,122.52,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68E S184C",2
"lib1","SARS-CoV-2","TATAAGCTGATTATTA",4,76.48,6.04,-4.72,1.21,1.5,1.25,0.03,">1 nonsynonymous","V37C D112V N118Q",3
"lib1","SARS-CoV-2","TATAAGCTGCCTTCGG",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T F134L",2
"lib1","SARS-CoV-2","TATAAGCTGTCCAGAG",2,27.2,10.22,-0.54,0.05,2.86,1,0,">1 nonsynonymous","L60A T140W K199L",3
"lib1","SARS-CoV-2","TATAAGCTTCCCAGAG",2,135.12,10.69,-0.07,0.07,2.89,1.08,0,">1 nonsynonymous","T55L Q84S",2
"lib1","SARS-CoV-2","TATAAGCTTGTTTCCT",2,7.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69E D112G E154T",3
"lib1","SARS-CoV-2","TATAAGGAATATTCAC",2,15.13,10.56,-0.2,0.07,2.89,1.07,0,">1 nonsynonymous","F126L K132G",2
"lib1","SARS-CoV-2","TATAAGGACTGCTGGA",2,45.81,8.26,-2.5,0.23,1.65,1.12,0.02,">1 nonsynonymous","R127P I138V P197Y",3
"lib1","SARS-CoV-2","TATAAGGCCATGTAAC",2,68.81,10.37,-0.39,0.1,2.79,1.04,0.01,"1 nonsynonymous","Y178A",1
"lib1","SARS-CoV-2","TATAAGGGCACAAGAC",1,21.55,9.92,-0.84,0.1,2.13,1.01,0.01,">1 nonsynonymous","T63V W106A L122G",3
"lib1","SARS-CoV-2","TATAAGGGTATAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* K132Y G166P",3
"lib1","SARS-CoV-2","TATAAGGTGCTGATTG",1,25.38,10.75,-0.02,0.08,2.85,1.04,0,"1 nonsynonymous","G196V",1
"lib1","SARS-CoV-2","TATAAGGTGGCTTTAT",1,0.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100C",1
"lib1","SARS-CoV-2","TATAAGTACATACTAA",3,41.71,8.52,-2.25,0.08,2.89,1.07,0,">1 nonsynonymous","Y39W T85H S129E N157T Q168S",5
"lib1","SARS-CoV-2","TATAAGTACCGCAAAA",8,37.06,10.11,-0.66,0.1,2.68,1.01,0,">1 nonsynonymous","A18P Y50S",2
"lib1","SARS-CoV-2","TATAAGTCCGACGCCG",1,27.07,9.59,-1.17,0.29,2.55,1.24,0.04,"wildtype","",0
"lib1","SARS-CoV-2","TATAAGTCTAAATAAT",1,35.6,10.7,-0.07,0.1,2.88,1.08,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","TATAAGTGAACACATA",2,43.33,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","R16L S43P D68N P96L",4
"lib1","SARS-CoV-2","TATAAGTGCGTAGATA",2,1.31,NA,NA,NA,NA,NA,NA,"stop","F12K D90N S147Y P161* G166*",5
"lib1","SARS-CoV-2","TATAAGTGCTAACCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y119* V173L",2
"lib1","SARS-CoV-2","TATAAGTGTACCATGT",5,0.26,NA,NA,NA,NA,NA,NA,"stop","F99G P149* G174R",3
"lib1","SARS-CoV-2","TATAAGTTACAGATAA",6,212.04,7.72,-3.05,0.22,1.5,1.1,0.02,">1 nonsynonymous","T15S N58P F160L Q176L",4
"lib1","SARS-CoV-2","TATAAGTTACTGCCGT",5,11.33,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88P W106V G116C",3
"lib1","SARS-CoV-2","TATAAGTTAGTAATTT",9,104.6,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y66L S129H P133N N171R",4
"lib1","SARS-CoV-2","TATAAGTTTAAGCGTA",9,127.31,9.71,-1.05,0.04,2.85,1.05,0,">1 nonsynonymous","Y21W G83N E154L",3
"lib1","SARS-CoV-2","TATAAGTTTACGCAAC",1,14.18,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S19H I28E K94A D97L",4
"lib1","SARS-CoV-2","TATAAGTTTCAGTAAC",3,2.69,NA,NA,NA,NA,NA,NA,"stop","C6V R25* N171C",3
"lib1","SARS-CoV-2","TATAATAAAAACCTTC",6,54.85,6.41,-4.35,0.54,1.5,1.15,0.02,">1 nonsynonymous","T55G V77L A105C K114P Y119I I142R",6
"lib1","SARS-CoV-2","TATAATAAACCTTTGA",1,18.2,8.97,-1.79,0.1,2.85,1.07,0.01,">1 nonsynonymous","A18V F126Y",2
"lib1","SARS-CoV-2","TATAATAAATAAATTG",2,7.33,8.87,-1.9,0.28,1.5,1.1,0.03,">1 nonsynonymous","N1L F8V T15L T148P",4
"lib1","SARS-CoV-2","TATAATAAATTAGATG",4,84.63,10.07,-0.7,0.06,2.42,1.01,0,">1 nonsynonymous","F8L P96Q",2
"lib1","SARS-CoV-2","TATAATAATAGCGAGA",2,55.33,8.99,-1.77,0.18,1.5,1.16,0.01,">1 nonsynonymous","R124K P149F",2
"lib1","SARS-CoV-2","TATAATACAATCACGC",8,18.65,6,-4.76,2,1.5,1.36,0.02,">1 nonsynonymous","L5F S41A A105P Y143S",4
"lib1","SARS-CoV-2","TATAATACAATGATAT",2,8.11,10.69,-0.08,0.15,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAATACAGACCAGA",2,7.6,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","E10G S19V V77K A89Q",4
"lib1","SARS-CoV-2","TATAATACCTACCAAT",3,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M K94W A105N Y121C",4
"lib1","SARS-CoV-2","TATAATACGGTAGACT",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97K Y119P V181S",3
"lib1","SARS-CoV-2","TATAATAGAGAAATAC",7,179.04,10.55,-0.21,0.06,2.88,1.05,0,">1 nonsynonymous","S45T C61M L122V",3
"lib1","SARS-CoV-2","TATAATAGAGGAGTAG",2,8.08,10.89,0.13,0.07,2.98,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TATAATAGCGGTTCGG",2,19.76,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","N118S D137R G146R",3
"lib1","SARS-CoV-2","TATAATAGTAATTAGT",8,1070.95,10.64,-0.12,0.04,2.92,1.04,0,">1 nonsynonymous","T3D P54T",2
"lib1","SARS-CoV-2","TATAATATAAAAAATA",7,2.35,NA,NA,NA,NA,NA,NA,"stop","P96* K114M N157K",3
"lib1","SARS-CoV-2","TATAATATAAATGTTA",4,94.5,10.84,0.07,0.09,2.95,1.02,0,"1 nonsynonymous","S53T",1
"lib1","SARS-CoV-2","TATAATATACAGGCGG",3,28.38,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","I28A D97G V103L P133M",4
"lib1","SARS-CoV-2","TATAATATATTTTCTC",2,13.78,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","S41V L57H F134Y Q144G N157W",5
"lib1","SARS-CoV-2","TATAATATCAATAACA",1,49.41,6.11,-4.65,0.81,1.5,1.17,0.02,">1 nonsynonymous","S45Q N92F K198W",3
"lib1","SARS-CoV-2","TATAATATCATATAAG",2,29.1,10.09,-0.67,0.1,2.78,1,0,">1 nonsynonymous","R27M G152I",2
"lib1","SARS-CoV-2","TATAATATCCAAACGA",2,16.44,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","L5G R16C Y91P",3
"lib1","SARS-CoV-2","TATAATATCGTTCAAT",1,19.48,9.02,-1.74,0.24,1.88,1.09,0.03,">1 nonsynonymous","C6L N58C K114L",3
"lib1","SARS-CoV-2","TATAATATCTGAAAAT",2,10.27,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","S69P Y93A A105M",3
"lib1","SARS-CoV-2","TATAATATGACGCCTG",1,22.65,10.7,-0.06,0.08,2.9,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TATAATCAAGTAAGGT",3,86.1,10.78,0.01,0.06,2.88,1.07,0,">1 nonsynonymous","K132A T201Q",2
"lib1","SARS-CoV-2","TATAATCCACGCTTGG",2,1.38,NA,NA,NA,NA,NA,NA,"stop","V52L I88* G174T S200L",4
"lib1","SARS-CoV-2","TATAATCCAGCTCGAG",4,2.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160C",1
"lib1","SARS-CoV-2","TATAATCCATATAACT",1,24.97,6.62,-4.15,0.46,1.5,1.15,0.02,">1 nonsynonymous","N4T G101S E141C K199S",4
"lib1","SARS-CoV-2","TATAATCCCATATTCT",6,188.83,10.51,-0.25,0.02,2.91,1.01,0,"1 nonsynonymous","P7Y",1
"lib1","SARS-CoV-2","TATAATCCCTGACAGG",1,8.86,10.12,-0.64,0.25,2.27,1.05,0.02,">1 nonsynonymous","E10S E135V",2
"lib1","SARS-CoV-2","TATAATCGTAGAACAA",3,63.04,10.8,0.03,0.09,2.93,1.06,0,"1 nonsynonymous","R16I",1
"lib1","SARS-CoV-2","TATAATCTACTATGCG",3,6.68,10.29,-0.48,0.11,2.87,1.02,0,">1 nonsynonymous","T15S V37R T55G E135K",4
"lib1","SARS-CoV-2","TATAATCTATAAGGAT",5,444.62,10.26,-0.5,0.04,2.79,1,0,">1 nonsynonymous","Q84L P149T",2
"lib1","SARS-CoV-2","TATAATCTATAGCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R G116L R127H A145L",4
"lib1","SARS-CoV-2","TATAATCTTACAAGAC",5,165.87,10.16,-0.61,0.03,2.91,1.02,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","TATAATCTTGGATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10A A89* N157S",3
"lib1","SARS-CoV-2","TATAATGAAAAACGTT",3,12.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V Y50L",2
"lib1","SARS-CoV-2","TATAATGAACTTTGAC",4,0.98,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib1","SARS-CoV-2","TATAATGAAGAAGTTT",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V Q168A",2
"lib1","SARS-CoV-2","TATAATGATATAGTGG",2,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y I104T F134L",3
"lib1","SARS-CoV-2","TATAATGATATCCTCG",4,25.3,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","C6Y K94L C158M",3
"lib1","SARS-CoV-2","TATAATGATCCATACA",1,6.64,10.76,-0.01,0.07,2.98,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAATGATTGGGACT",13,1815.38,10.6,-0.17,0.03,2.94,1.01,0,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","TATAATGCCGGTGAAG",2,19.4,8.41,-2.36,0.26,1.5,1.12,0.04,"1 nonsynonymous","D137T",1
"lib1","SARS-CoV-2","TATAATGCCTAAATAG",1,7.65,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","N4V S69V A89I L122P",4
"lib1","SARS-CoV-2","TATAATGCTCAAACAT",1,1.08,NA,NA,NA,NA,NA,NA,"stop","D59* S139R",2
"lib1","SARS-CoV-2","TATAATGCTCTCTTAA",3,37.2,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N24I G51H L60K R73Y N92D N110Y",6
"lib1","SARS-CoV-2","TATAATGGATAGTCCA",8,150.02,10.68,-0.08,0.04,2.86,1.04,0,">1 nonsynonymous","N40L T100F",2
"lib1","SARS-CoV-2","TATAATGGTTAAGCAA",7,54.25,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","D59W F167R A192V",3
"lib1","SARS-CoV-2","TATAATGGTTCAACCG",1,12.33,8.67,-2.09,0.27,1.5,1.17,0.03,">1 nonsynonymous","N107R V180T",2
"lib1","SARS-CoV-2","TATAATGTAACAGGCT",4,28.78,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N4Q A33N V37N A81H W106K",5
"lib1","SARS-CoV-2","TATAATGTAATATCAA",7,308.81,10.18,-0.59,0.05,2.86,1.01,0,">1 nonsynonymous","A22V C61S I138V",3
"lib1","SARS-CoV-2","TATAATGTCATATCAA",5,52.34,10.82,0.05,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAATGTCCTAAACC",3,0.21,NA,NA,NA,NA,NA,NA,"stop","N1S N40* L60G D97Y",4
"lib1","SARS-CoV-2","TATAATGTTGTATTAG",6,265.81,9.76,-1,0.03,2.89,1.06,0,">1 nonsynonymous","T100Y L125T",2
"lib1","SARS-CoV-2","TATAATTAACGACTAA",4,37.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W R16H R25M K87R Y93D V173F",6
"lib1","SARS-CoV-2","TATAATTACATCAAAA",4,80.84,10.81,0.05,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAATTACCAACCAA",10,49.24,6,-4.76,1.4,1.5,1.2,0.02,">1 nonsynonymous","C31P A105I K132F",3
"lib1","SARS-CoV-2","TATAATTAGGTGGCTG",2,20.26,10.12,-0.64,0.07,1.89,1.1,0,">1 nonsynonymous","L57R N109L",2
"lib1","SARS-CoV-2","TATAATTCAGCCCGCG",20,397.39,8.07,-2.69,0.15,2.15,1.09,0.01,">1 nonsynonymous","R27V A145Q N157Y",3
"lib1","SARS-CoV-2","TATAATTGACAGTAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L122V S184*",2
"lib1","SARS-CoV-2","TATAATTGCAACACTA",3,58.43,10.65,-0.12,0.04,2.93,1.06,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TATAATTGCTACACGG",4,42.88,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","E10V V180G",2
"lib1","SARS-CoV-2","TATAATTGCTCATGTT",8,439.3,10.77,0.01,0.06,2.9,1.05,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","TATAATTTGAACCGTA",4,2219.68,10.68,-0.09,0.04,2.94,1.04,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TATAATTTTCAAGATA",6,19.95,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1G V77K W106R",3
"lib1","SARS-CoV-2","TATAATTTTTGTGGTG",3,14.99,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y35S A42S Y91H Y175M",4
"lib1","SARS-CoV-2","TATACAAAAACTTACT",4,35.41,6.19,-4.58,0.75,1.83,1.19,0.01,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","TATACAAAAGACATAG",6,71.34,8.26,-2.51,0.15,2.7,1.08,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","TATACAAACATTAGGT",2,21.45,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","I2V P54L A105N Y119T T170V",5
"lib1","SARS-CoV-2","TATACAAACTAGTGAT",1,38.84,6,-4.76,1.71,3,1.29,0.01,">1 nonsynonymous","T100Y F167Q",2
"lib1","SARS-CoV-2","TATACAAACTGGTTTA",4,11.32,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","A14T Y50N D68K Y119S T201G",5
"lib1","SARS-CoV-2","TATACAAAGAGACTTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","L38* S139K",2
"lib1","SARS-CoV-2","TATACAAAGGTATGGT",3,85.01,10.57,-0.2,0.04,2.87,1.07,0,"1 nonsynonymous","G152Y",1
"lib1","SARS-CoV-2","TATACAACAATGAGAC",2,1.03,NA,NA,NA,NA,NA,NA,"stop","W23L Y35* Y91P",3
"lib1","SARS-CoV-2","TATACAACATCAACAC",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S A89V S129R T201S",4
"lib1","SARS-CoV-2","TATACAACCATAGTAA",5,0.57,NA,NA,NA,NA,NA,NA,"stop","F8S C49F W106R S108* S147A",5
"lib1","SARS-CoV-2","TATACAACGAGAAAGG",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S G51L Y143L K198L",4
"lib1","SARS-CoV-2","TATACAACGTACCAAT",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E F99Y S113I N120W",4
"lib1","SARS-CoV-2","TATACAAGAAACTGAC",4,37.23,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","G101R K132M",2
"lib1","SARS-CoV-2","TATACAAGACAGGACC",1,19,9.97,-0.79,0.14,2.65,1.05,0.01,">1 nonsynonymous","S129I F134D",2
"lib1","SARS-CoV-2","TATACAAGACTTCTTT",7,149.56,10.64,-0.13,0.04,2.89,1.04,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TATACAAGCAATTATA",3,0,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib1","SARS-CoV-2","TATACAAGCTAAATGC",9,64.31,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2T G9F D68K",3
"lib1","SARS-CoV-2","TATACAAGGGTGCAAC",4,51.33,10.66,-0.1,0.05,2.9,1.03,0,">1 nonsynonymous","A33V K56V V153K",3
"lib1","SARS-CoV-2","TATACAATAAAAATGA",10,101.22,10.79,0.03,0.06,2.85,1.09,0,">1 nonsynonymous","D98A L122M",2
"lib1","SARS-CoV-2","TATACAATAAACGACT",7,134.33,10.49,-0.27,0.04,2.86,1.06,0,"1 nonsynonymous","E141W",1
"lib1","SARS-CoV-2","TATACAATACATGATA",2,56.33,10.76,-0.01,0.05,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TATACAATGGCTACAG",3,121.93,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","I28R G86C E154F V181T",4
"lib1","SARS-CoV-2","TATACAATTATACAAA",5,1.85,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","TATACACAAAGAAAAA",11,86.89,6.08,-4.68,1.2,1.5,1.25,0.03,">1 nonsynonymous","S41V D59C A89E R124C",4
"lib1","SARS-CoV-2","TATACACATGACGCAA",2,5.9,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V77W T140I",2
"lib1","SARS-CoV-2","TATACACATTTAATGC",1,25.78,10.57,-0.19,0.07,2.92,1.05,0,"1 nonsynonymous","F62N",1
"lib1","SARS-CoV-2","TATACACCAAATCTTT",3,58.95,6,-4.76,2,3,1.16,0,">1 nonsynonymous","K87S N118S Q144M N157S",4
"lib1","SARS-CoV-2","TATACACCAACCAGAT",2,62.18,10.65,-0.11,0.07,2.78,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TATACACCAGCTTAAT",3,33.38,10.7,-0.07,0.06,2.97,1,0,"1 nonsynonymous","T85M",1
"lib1","SARS-CoV-2","TATACACCCGGAACAT",2,25.25,9.31,-1.45,0.24,1.5,1.07,0.02,">1 nonsynonymous","F62E S139Y",2
"lib1","SARS-CoV-2","TATACACCGAGAACAA",1,15.66,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","F99P Y121Q S139Q G166R S184H",5
"lib1","SARS-CoV-2","TATACACCGGGGATAG",11,52.36,10.74,-0.02,0.04,2.96,1,0,">1 nonsynonymous","D97N I104W",2
"lib1","SARS-CoV-2","TATACACGAAACTTTT",5,91.87,10.27,-0.49,0.04,2.91,1,0,">1 nonsynonymous","T15M N58A",2
"lib1","SARS-CoV-2","TATACACGTACCAATA",3,1.14,NA,NA,NA,NA,NA,NA,"stop","C6V R27H F44*",3
"lib1","SARS-CoV-2","TATACACTAATAACAC",1,84.79,10.72,-0.05,0.05,2.85,1.07,0,"1 nonsynonymous","N58M",1
"lib1","SARS-CoV-2","TATACACTCGCACGGA",3,35.76,6.07,-4.7,0.8,2.41,1.2,0.01,">1 nonsynonymous","S43F K87I L95D",3
"lib1","SARS-CoV-2","TATACACTGACCTAGG",3,30.09,9.25,-1.51,0.25,1.64,1.27,0.03,">1 nonsynonymous","Y50N T201M",2
"lib1","SARS-CoV-2","TATACACTTGCAGTGT",11,163.76,8.25,-2.52,0.17,1.73,1.15,0.01,">1 nonsynonymous","G74Y I142T",2
"lib1","SARS-CoV-2","TATACAGATAAACGTT",4,25.7,6.59,-4.17,0.22,1.71,1.21,0.01,">1 nonsynonymous","I2M W106R F156D N157K C195K",5
"lib1","SARS-CoV-2","TATACAGATATGCATG",2,16.44,9.06,-1.7,0.11,2.65,1.12,0.01,">1 nonsynonymous","L5D D34N G117N",3
"lib1","SARS-CoV-2","TATACAGTATAGTCCC",3,93.77,6,-4.76,0.86,1.5,1.23,0.01,">1 nonsynonymous","S36R F47T P82V Y119E F167L Q176P",6
"lib1","SARS-CoV-2","TATACAGTCGAATCAG",2,0.74,NA,NA,NA,NA,NA,NA,"stop","P82Y S108* L125C Y143C",4
"lib1","SARS-CoV-2","TATACAGTGTTAGAGG",1,17.76,10.71,-0.05,0.06,2.82,1.12,0,">1 nonsynonymous","L5A F44I",2
"lib1","SARS-CoV-2","TATACAGTTGATTACA",8,23.79,6.62,-4.15,0.51,1.5,1.07,0.03,">1 nonsynonymous","L5T S45A K94L R179L",4
"lib1","SARS-CoV-2","TATACATAATATTTCA",3,67.02,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6F F167S Q176T",3
"lib1","SARS-CoV-2","TATACATAATGAGTAC",6,119.08,10.15,-0.62,0.09,2.65,1.04,0,">1 nonsynonymous","V52Y P96N L122M",3
"lib1","SARS-CoV-2","TATACATAATTAACCG",3,72.33,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y121L G172W",2
"lib1","SARS-CoV-2","TATACATATCGCAGAT",1,36.18,10.75,-0.02,0.08,2.98,1,0,">1 nonsynonymous","D98N A105S N130L",3
"lib1","SARS-CoV-2","TATACATCCGCTGAAA",1,8.58,9.16,-1.61,0.3,1.55,1.13,0.04,">1 nonsynonymous","C31V L38S",2
"lib1","SARS-CoV-2","TATACATCGGATTCAT",1,17.86,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G9D S41L F99D Y143S P169F",5
"lib1","SARS-CoV-2","TATACATGCTTATCCA",2,19.61,9.26,-1.51,0.23,1.63,1.13,0.02,">1 nonsynonymous","L38T D90S",2
"lib1","SARS-CoV-2","TATACATTAACAGATA",7,37.14,10.24,-0.53,0.06,2.82,1.05,0,">1 nonsynonymous","E135G E141K P149N",3
"lib1","SARS-CoV-2","TATACATTACCGGATA",3,10.87,10.73,-0.03,0.13,3,1.01,0,"1 nonsynonymous","D97K",1
"lib1","SARS-CoV-2","TATACATTAGGTTGAC",6,99.63,10.27,-0.49,0.05,2.76,1,0,"1 nonsynonymous","Y123I",1
"lib1","SARS-CoV-2","TATACCAAAATGCTAT",4,68.1,10.26,-0.5,0.07,2.79,1.01,0,">1 nonsynonymous","Y91A V115P",2
"lib1","SARS-CoV-2","TATACCAAATCTGACA",7,133.45,7.79,-2.98,0.15,1.58,1.16,0.01,">1 nonsynonymous","G146T Q176L",2
"lib1","SARS-CoV-2","TATACCAAGTATAGAT",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A T15I T85D",3
"lib1","SARS-CoV-2","TATACCAATCAATTCA",5,78.26,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","A33K C49D T100S F134D E141Q L162T",6
"lib1","SARS-CoV-2","TATACCACACTTTATA",8,125.96,6,-4.76,0.83,1.5,1.22,0.01,">1 nonsynonymous","I72Q F126Y T148R P177F",4
"lib1","SARS-CoV-2","TATACCACCTTTGCTA",10,113.47,10.65,-0.11,0.06,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TATACCACGAGAGGGA",4,0,NA,NA,NA,NA,NA,NA,"stop","F99T P133* G146A C150R",4
"lib1","SARS-CoV-2","TATACCACTAACATTA",4,0.95,NA,NA,NA,NA,NA,NA,"stop","R16V V77* L95F Q163S",4
"lib1","SARS-CoV-2","TATACCACTAGGCATG",3,12.89,9.1,-1.67,0.26,2.42,1.35,0.02,">1 nonsynonymous","R73A D90C",2
"lib1","SARS-CoV-2","TATACCAGAAAAAATG",4,103.93,8.79,-1.98,0.08,2.77,1.12,0,">1 nonsynonymous","Y119I I142F",2
"lib1","SARS-CoV-2","TATACCAGAACGTAAA",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73I N110H P169I",3
"lib1","SARS-CoV-2","TATACCAGTACACTAA",4,32.7,10.31,-0.45,0.05,2.94,1,0,">1 nonsynonymous","I2H K56N C61W I104L",4
"lib1","SARS-CoV-2","TATACCAGTTTGGTTG",4,65.14,10.14,-0.63,0.04,2.69,1.05,0,">1 nonsynonymous","T15D Q84V S184M",3
"lib1","SARS-CoV-2","TATACCAGTTTTTACG",3,52.76,6.62,-4.15,0.4,1.5,1.11,0.02,">1 nonsynonymous","T55D G83V N120S Y165W",4
"lib1","SARS-CoV-2","TATACCATAGACCTTT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","F44Y E141Q N151* Q168T",4
"lib1","SARS-CoV-2","TATACCCAATGGACTG",1,21.18,10.55,-0.22,0.07,2.9,1.03,0,">1 nonsynonymous","T63N G152C",2
"lib1","SARS-CoV-2","TATACCCAGTACACAG",7,40.03,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68G D90K N130S",3
"lib1","SARS-CoV-2","TATACCCATGAGATAC",7,55.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82D W106V",2
"lib1","SARS-CoV-2","TATACCCCAAACAATG",1,38.78,6.17,-4.59,0.54,1.5,1.14,0.01,">1 nonsynonymous","Y35M I80N D98K N107V S184M L187P",6
"lib1","SARS-CoV-2","TATACCCCAAGCTCTA",3,31.61,6.66,-4.11,0.36,1.5,1.13,0.02,">1 nonsynonymous","G9R G83S S108V G116W P191S K198S",6
"lib1","SARS-CoV-2","TATACCCCTAATCTTA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N120* K132A P169D",3
"lib1","SARS-CoV-2","TATACCCGCAGTACAT",8,153.57,8.96,-1.8,0.07,2.81,1.14,0,">1 nonsynonymous","L122W G146M",2
"lib1","SARS-CoV-2","TATACCCTCGCTTGGT",10,6.53,NA,NA,NA,NA,NA,NA,"stop","V32L L57C I80E D98K L122* L125T S164W",7
"lib1","SARS-CoV-2","TATACCCTTAACGTAG",1,5.69,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","N1E T85L V103S",3
"lib1","SARS-CoV-2","TATACCGAAACTGTAG",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57D D112L N120K",3
"lib1","SARS-CoV-2","TATACCGAAGCCTGCT",3,7.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T55V A89W",2
"lib1","SARS-CoV-2","TATACCGACACTACAC",1,8.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60I G74D",2
"lib1","SARS-CoV-2","TATACCGAGGCCAATC",9,221.29,10.58,-0.19,0.04,2.92,1.01,0,">1 nonsynonymous","N4Q S41P",2
"lib1","SARS-CoV-2","TATACCGCAACCCCAC",6,58.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80S P149G",2
"lib1","SARS-CoV-2","TATACCGCAAGAAGCT",5,52.47,9.04,-1.73,0.17,1.77,1.12,0.01,">1 nonsynonymous","I72V R127L",2
"lib1","SARS-CoV-2","TATACCGCAGTACAGT",12,200.05,10.15,-0.61,0.07,2.51,1.01,0,"1 nonsynonymous","W106R",1
"lib1","SARS-CoV-2","TATACCGGGGCCCCAA",4,9.66,9.26,-1.5,0.42,1.5,1.02,0.06,">1 nonsynonymous","V37Q S45D I104N",3
"lib1","SARS-CoV-2","TATACCGTTCCGTGAT",8,123.14,10.44,-0.32,0.06,2.89,1.03,0,">1 nonsynonymous","F44W E135S",2
"lib1","SARS-CoV-2","TATACCTAATGGAAAT",3,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q L60V R78C P133L",4
"lib1","SARS-CoV-2","TATACCTCAATAATTT",3,32.61,10.2,-0.56,0.07,2.84,1.12,0.01,">1 nonsynonymous","C6Y Y35L P54H D59E",4
"lib1","SARS-CoV-2","TATACCTCGTTCCAGC",5,127.4,10.54,-0.22,0.04,2.9,1.02,0,">1 nonsynonymous","A33L C61D",2
"lib1","SARS-CoV-2","TATACCTCTCTATCAT",3,61.12,6.8,-3.97,0.41,1.5,1.12,0.04,">1 nonsynonymous","L57R D112K P161S F167L",4
"lib1","SARS-CoV-2","TATACCTGCTAAACAT",8,106.38,9.02,-1.75,0.14,1.67,1.15,0.01,">1 nonsynonymous","F17T V37R T148S",3
"lib1","SARS-CoV-2","TATACGAAGGATGAGT",6,68.2,8.36,-2.41,0.24,1.71,1.12,0.02,">1 nonsynonymous","S45D F99I Y119T",3
"lib1","SARS-CoV-2","TATACGAATACGGAGC",6,43.72,6,-4.76,2,3,1.19,0,">1 nonsynonymous","V71E A105K V173S",3
"lib1","SARS-CoV-2","TATACGACAAACAATA",1,25.11,8.17,-2.6,0.13,2.27,1.1,0.01,">1 nonsynonymous","D97I S113I",2
"lib1","SARS-CoV-2","TATACGACAATAGTAG",4,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85G D90F G117D Y143A",4
"lib1","SARS-CoV-2","TATACGACTAACTAAA",3,33.63,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6W Y123K P161T",3
"lib1","SARS-CoV-2","TATACGATAGGCCCAT",6,26.1,6,-4.76,1.21,2.5,1.29,0.01,">1 nonsynonymous","D34V N58K P82T L95Y R124P Y178L",6
"lib1","SARS-CoV-2","TATACGATGGGATAAG",6,61.37,10.86,0.09,0.08,2.9,1.05,0,"1 nonsynonymous","P149E",1
"lib1","SARS-CoV-2","TATACGATTGTTCTAA",2,5.39,9.35,-1.41,0.23,2.34,1.05,0.02,">1 nonsynonymous","N1K D34L N40K K56E",4
"lib1","SARS-CoV-2","TATACGCATTTAAAAA",11,49.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P7T S29L A42Y P96Y Y123G",5
"lib1","SARS-CoV-2","TATACGCCTCCCAGGG",2,42.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P82H N107I G146P",3
"lib1","SARS-CoV-2","TATACGGATTTCCTAC",2,17.9,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11P N92C S113N Y121I",4
"lib1","SARS-CoV-2","TATACGGGTATGTCTC",1,11.17,10.7,-0.06,0.09,2.99,1,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","TATACGGTTATAGAGT",9,27.2,6.35,-4.42,0.32,1.5,1.12,0.01,">1 nonsynonymous","K56A I104P K199E",3
"lib1","SARS-CoV-2","TATACGTAACCGGGTT",1,59.68,10.68,-0.09,0.04,2.89,1.02,0,">1 nonsynonymous","K132T G196R",2
"lib1","SARS-CoV-2","TATACGTATCCACAAC",5,19.16,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","A33H P82A T85L I104R P133T",5
"lib1","SARS-CoV-2","TATACGTCCACAACTG",5,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R G172N",2
"lib1","SARS-CoV-2","TATACTAAACTGACTA",11,101.21,9.54,-1.23,0.14,1.51,1.16,0.01,"1 nonsynonymous","P96Y",1
"lib1","SARS-CoV-2","TATACTAACGACTAAT",1,18.89,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P7Y F12L Y91T P161D F185G K198T",6
"lib1","SARS-CoV-2","TATACTAACTAGGACA",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26S F44Y K87D L95S",4
"lib1","SARS-CoV-2","TATACTAAGCATGTGA",2,63.03,8.35,-2.41,0.17,1.83,1.15,0.01,">1 nonsynonymous","Y39H S69M S113T",3
"lib1","SARS-CoV-2","TATACTAATAACTTCG",4,47.89,6.01,-4.75,1.62,1.5,1.2,0.03,">1 nonsynonymous","L57N D68V V115L N151A",4
"lib1","SARS-CoV-2","TATACTACAAAAATGG",5,66.25,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S19Y N118S Y143E S147T G152T",5
"lib1","SARS-CoV-2","TATACTACCCCCAAAA",3,104.39,9.78,-0.98,0.12,2.41,1.06,0.01,">1 nonsynonymous","G83D G116I",2
"lib1","SARS-CoV-2","TATACTACTACATCTA",3,84.48,10.54,-0.22,0.05,2.94,1,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","TATACTAGGAGATTAC",2,54.13,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F47L R127T",2
"lib1","SARS-CoV-2","TATACTAGGGTACTTT",4,93.5,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","E10L Y50N N120A",3
"lib1","SARS-CoV-2","TATACTATACTCGCAG",4,1.65,NA,NA,NA,NA,NA,NA,"stop","Y35* G86F",2
"lib1","SARS-CoV-2","TATACTATCCGACAAA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L I88S",2
"lib1","SARS-CoV-2","TATACTATTAGTAGAA",2,22.2,10.19,-0.58,0.11,2.2,1.01,0,">1 nonsynonymous","D90G F134G T140A",3
"lib1","SARS-CoV-2","TATACTCAAATACCAA",4,2.14,NA,NA,NA,NA,NA,NA,"stop","A42K E135* T148C N151T",4
"lib1","SARS-CoV-2","TATACTCATAACTCAA",1,61.81,10.71,-0.05,0.07,2.79,1.11,0,"1 nonsynonymous","T148A",1
"lib1","SARS-CoV-2","TATACTCCTCCTAAAA",3,51.34,10.76,-0.01,0.05,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TATACTCCTGCTGTGT",1,8.88,10.6,-0.17,0.13,2.72,1.29,0.01,">1 nonsynonymous","L60N E141K",2
"lib1","SARS-CoV-2","TATACTCGCCACTAGC",4,77.12,10.79,0.03,0.09,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATACTGAAGCCATAT",1,46.78,10.89,0.13,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATACTGACTACCAAC",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H D90P C150V",3
"lib1","SARS-CoV-2","TATACTGAGCTTAGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","I72C P96Y L122G Y143T P149D G155*",6
"lib1","SARS-CoV-2","TATACTGATAAAAGCT",1,1.05,NA,NA,NA,NA,NA,NA,"stop","K56Y P133* F156T H189Y",4
"lib1","SARS-CoV-2","TATACTGATGTAGTCC",1,17.46,6.32,-4.45,0.66,2.39,1.29,0.02,">1 nonsynonymous","G9W A14S K56T N64T Y123T F185R",6
"lib1","SARS-CoV-2","TATACTGCAATAAATG",5,39.57,6.97,-3.79,0.37,1.5,1.17,0.03,">1 nonsynonymous","K26E N107Q S164L",3
"lib1","SARS-CoV-2","TATACTGTCCCACACT",2,12.98,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S36G V103F",2
"lib1","SARS-CoV-2","TATACTGTGTATTATC",1,17.25,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","S19M T63Q A89D",3
"lib1","SARS-CoV-2","TATACTGTTGAGTACT",7,31.97,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P54S N58I Y143R",3
"lib1","SARS-CoV-2","TATACTTCAACCCCCG",2,0.3,NA,NA,NA,NA,NA,NA,"stop","S36A V65L G101* G174S",4
"lib1","SARS-CoV-2","TATACTTCCAAGAGAC",7,48.3,10.78,0.02,0.06,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TATACTTGACTAATGA",2,19.61,6,-4.76,2,3,1.11,0,">1 nonsynonymous","Y121M R127E",2
"lib1","SARS-CoV-2","TATACTTTTCATAACC",11,46.92,6,-4.76,1.97,1.5,1.22,0.03,">1 nonsynonymous","C6S N24Y D97K N107T N118K V173F L187G",7
"lib1","SARS-CoV-2","TATAGAAAAGAAGGAT",3,31.47,8.64,-2.12,0.21,2.18,1.21,0.02,">1 nonsynonymous","N30Q G74S Q168R S200N",4
"lib1","SARS-CoV-2","TATAGAAAAGAGAGTT",3,28.25,8.7,-2.07,0.13,2.33,1.09,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","TATAGAAAAGATAATG",4,9.72,6.28,-4.49,0.76,1.5,1.2,0.03,">1 nonsynonymous","Y66T G86D G152A",3
"lib1","SARS-CoV-2","TATAGAAACTTGCCCC",5,45.19,7.2,-3.57,0.27,1.5,1.14,0.02,">1 nonsynonymous","T55D W106T E135L V194A",4
"lib1","SARS-CoV-2","TATAGAAAGAACTCGC",3,45.36,8.71,-2.06,0.15,2.23,1.19,0.01,">1 nonsynonymous","S43L N120T Q144W",3
"lib1","SARS-CoV-2","TATAGAAAGGCTTGGA",6,48.67,6.63,-4.14,0.34,1.5,1.09,0.01,">1 nonsynonymous","A14M G86L",2
"lib1","SARS-CoV-2","TATAGAAATACCCCAA",4,47.45,6,-4.76,1.67,1.5,1.21,0.02,">1 nonsynonymous","T55K N64S K87S G101A",4
"lib1","SARS-CoV-2","TATAGAACAAGCATTA",1,13.25,9.8,-0.97,0.16,1.94,1,0.02,">1 nonsynonymous","S19T S139D",2
"lib1","SARS-CoV-2","TATAGAACACCATTTT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","N4I V32H E76*",3
"lib1","SARS-CoV-2","TATAGAACATATGTAC",7,0.7,NA,NA,NA,NA,NA,NA,"stop","N1I N92F Y123*",3
"lib1","SARS-CoV-2","TATAGAACCAAAACAT",1,17.99,6.5,-4.26,0.42,1.5,1.22,0.02,">1 nonsynonymous","L38F Q84R S113F",3
"lib1","SARS-CoV-2","TATAGAACCACAATCG",5,401.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N24R Y66C A81S Y165G",4
"lib1","SARS-CoV-2","TATAGAACCCCACAGA",12,103.69,10.25,-0.51,0.07,2.88,1.02,0,">1 nonsynonymous","C6N K128S",2
"lib1","SARS-CoV-2","TATAGAACGCATAACT",6,19.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16G F99P K128T",3
"lib1","SARS-CoV-2","TATAGAATTCCTCAGT",2,2.7,NA,NA,NA,NA,NA,NA,"stop","C31* E141R",2
"lib1","SARS-CoV-2","TATAGAATTTATTAAT",5,29.41,9.99,-0.77,0.11,2.06,1.04,0,"1 nonsynonymous","P96D",1
"lib1","SARS-CoV-2","TATAGACAAGACGGCA",3,65.94,10.34,-0.43,0.06,2.81,1.03,0,">1 nonsynonymous","T55F D97F P149G",3
"lib1","SARS-CoV-2","TATAGACAATGACAAT",3,46.11,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","A18T G101A N107F",3
"lib1","SARS-CoV-2","TATAGACCTGCAAGTA",1,62.72,10.68,-0.08,0.07,2.92,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TATAGACGTGAGGACG",3,25.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6M G51L A89C E141C T201P",5
"lib1","SARS-CoV-2","TATAGACTATACTACA",3,9.47,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S19V K87H Y121V S184F",4
"lib1","SARS-CoV-2","TATAGAGAATCATTGT",2,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C I88T S139A G174F",4
"lib1","SARS-CoV-2","TATAGAGCCACCTGGA",1,12.03,6,-4.76,2,1.5,1.39,0.04,">1 nonsynonymous","Y21H I72S A89V",3
"lib1","SARS-CoV-2","TATAGAGCCGCCATTG",4,0.49,NA,NA,NA,NA,NA,NA,"stop","T46A Y50* Q84* D90S G146W N157G",6
"lib1","SARS-CoV-2","TATAGAGCCGGGCCAA",7,176.47,8.68,-2.08,0.09,2.92,1.07,0,"1 nonsynonymous","F126Q",1
"lib1","SARS-CoV-2","TATAGAGCGATACCGA",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117L P149L",2
"lib1","SARS-CoV-2","TATAGAGGCCTAAAAG",6,58.38,6.75,-4.02,0.23,1.5,1.1,0.01,">1 nonsynonymous","V20S Q168M Q176R A190S",4
"lib1","SARS-CoV-2","TATAGAGGTTTAAATG",8,79.64,6.52,-4.25,0.73,1.5,1.16,0.05,">1 nonsynonymous","P7V N40S K56G V115S F167L",5
"lib1","SARS-CoV-2","TATAGAGTGTTTGCCG",2,38.79,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8R F44I D97N N130I Y165L",5
"lib1","SARS-CoV-2","TATAGAGTTGACGACC",6,73.49,10.74,-0.03,0.05,2.69,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGATAAAATAATG",12,159.12,10.72,-0.05,0.05,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGATACCAGAACA",4,57.24,10.05,-0.71,0.08,2.71,1,0,"1 nonsynonymous","A105I",1
"lib1","SARS-CoV-2","TATAGATAGGACCCTA",2,65.69,10.54,-0.22,0.03,2.89,1.04,0,">1 nonsynonymous","G9S S41Y V182I",3
"lib1","SARS-CoV-2","TATAGATATAATAACC",8,20.38,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","Y91N C102F",2
"lib1","SARS-CoV-2","TATAGATCCTAAAATT",3,124.28,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I80M T100S P161S V173T",4
"lib1","SARS-CoV-2","TATAGATGATCCCGTG",7,33.89,7.59,-3.18,0.36,1.5,1,0.04,">1 nonsynonymous","P96S R127L V173E",3
"lib1","SARS-CoV-2","TATAGATGGGCAGCAG",5,57.05,10.69,-0.08,0.12,2.82,1.03,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","TATAGATTAGTCATTT",1,34.2,10.62,-0.14,0.06,2.94,1,0,">1 nonsynonymous","I88V N120S",2
"lib1","SARS-CoV-2","TATAGATTGATCGAGT",4,116.46,10.48,-0.29,0.04,2.9,1.05,0,">1 nonsynonymous","G9N L60P",2
"lib1","SARS-CoV-2","TATAGATTGGACACCC",3,59.14,10.17,-0.59,0.05,2.86,1,0,"1 nonsynonymous","F126H",1
"lib1","SARS-CoV-2","TATAGCAAACAGATGG",5,0,NA,NA,NA,NA,NA,NA,"stop","V11S D90* T100C A105* I142F G152P T170K",7
"lib1","SARS-CoV-2","TATAGCAAAGTTTATA",2,104.95,9.45,-1.31,0.07,2.8,1.09,0,">1 nonsynonymous","F62V G174V",2
"lib1","SARS-CoV-2","TATAGCAACCTAGAAA",4,70.21,10.53,-0.23,0.04,2.91,1,0,"1 nonsynonymous","S45Y",1
"lib1","SARS-CoV-2","TATAGCAAGCACCGAT",2,48.52,9.09,-1.67,0.15,2.07,1.15,0.01,">1 nonsynonymous","S43L G51V T63A T170A",4
"lib1","SARS-CoV-2","TATAGCACAAACGATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y N92A R179D",3
"lib1","SARS-CoV-2","TATAGCACCAGAAAGT",6,58.12,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","K26P S69E Y121S",3
"lib1","SARS-CoV-2","TATAGCACGACAGTAA",2,0.97,NA,NA,NA,NA,NA,NA,"stop","G83W E154K C195*",3
"lib1","SARS-CoV-2","TATAGCATAGATAAAC",1,17.31,10.75,-0.01,0.09,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGCCAAATCCCTG",7,95.24,10.19,-0.58,0.06,2.78,1.03,0,">1 nonsynonymous","K56C G117D N171Y",3
"lib1","SARS-CoV-2","TATAGCCACCGGGCGA",5,61.9,10.24,-0.52,0.05,2.83,1.05,0,"1 nonsynonymous","S164I",1
"lib1","SARS-CoV-2","TATAGCCAGAAGGGAA",2,51.51,10.75,-0.02,0.06,2.93,1.02,0,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","TATAGCCCATCCAAAA",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W F62V G74V L122Q",4
"lib1","SARS-CoV-2","TATAGCCCTGTTCGCA",2,22.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","E10M Y35L G146A C158E G174M E186N",6
"lib1","SARS-CoV-2","TATAGCCCTTCAATTG",8,3.91,NA,NA,NA,NA,NA,NA,"stop","C61* Y91E R124S P149D A190V",5
"lib1","SARS-CoV-2","TATAGCCGATTGTCAT",5,9.47,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","I2R C6K A14I N92L R136Q",5
"lib1","SARS-CoV-2","TATAGCCGCGAGCTAT",1,12.91,10.62,-0.15,0.09,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGCGAAAGTTGGC",4,67.71,10.32,-0.44,0.07,2.58,1.03,0,">1 nonsynonymous","R127G S164R",2
"lib1","SARS-CoV-2","TATAGCGAAATTATAG",1,24.12,6.07,-4.7,1.45,1.5,1.31,0.05,">1 nonsynonymous","V37N L131K",2
"lib1","SARS-CoV-2","TATAGCGACTGACCGA",1,44.63,10.05,-0.71,0.15,2.18,1.07,0.01,">1 nonsynonymous","A14L I28M Y91N H189S",4
"lib1","SARS-CoV-2","TATAGCGGTAGTATCA",1,11.17,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","Y21F S45Y Y50L T55Y Y119T",5
"lib1","SARS-CoV-2","TATAGCGGTTAATTTT",2,49.97,10.47,-0.29,0.05,2.94,1,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","TATAGCGTTGCCCGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34G N64I I104V E154C",4
"lib1","SARS-CoV-2","TATAGCTCTGTGCACT",2,17.83,10.13,-0.63,0.14,2.8,1,0.01,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","TATAGCTGCCACAAAT",3,17.52,9.28,-1.48,0.2,1.9,1.12,0.02,">1 nonsynonymous","C6G S41H V52Y P149N",4
"lib1","SARS-CoV-2","TATAGCTGTAATATAA",2,19.56,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V11N S41P I142C G155N",4
"lib1","SARS-CoV-2","TATAGCTTCACATATT",1,18.85,9.58,-1.18,0.25,1.5,1,0.03,">1 nonsynonymous","F12C N30K",2
"lib1","SARS-CoV-2","TATAGCTTGCTTTACG",2,823,8.63,-2.14,0.09,2.87,1.04,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","TATAGGAAAACGCGGG",7,102.1,8.84,-1.92,0.05,2.78,1.11,0,">1 nonsynonymous","G9Q S29A D34N G117T",4
"lib1","SARS-CoV-2","TATAGGAAAGCCATAA",4,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P N58I S184L",3
"lib1","SARS-CoV-2","TATAGGAAATATGATT",1,47.13,10.86,0.09,0.08,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGGAAGCGTACTT",2,13.68,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y91T P96M A105I",3
"lib1","SARS-CoV-2","TATAGGAAGGTAATCG",3,115.2,10.82,0.06,0.04,2.96,1.02,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","TATAGGACCCCACATT",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Q R136L V153Y",3
"lib1","SARS-CoV-2","TATAGGACTGCTTAGT",3,16.91,10.79,0.03,0.07,2.94,1.01,0,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","TATAGGAGCTTGATGA",2,77.4,10.72,-0.05,0.1,2.85,1.08,0,">1 nonsynonymous","I2E G9S",2
"lib1","SARS-CoV-2","TATAGGATATGCGACA",4,5.8,6,-4.76,2,1.5,1.29,0.04,"1 nonsynonymous","L183N",1
"lib1","SARS-CoV-2","TATAGGATTAGCTAAC",6,73.01,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C31H D90L G146I",3
"lib1","SARS-CoV-2","TATAGGATTTATATAG",11,225.42,8.89,-1.87,0.13,1.68,1.13,0.01,">1 nonsynonymous","D137F F160H V173K",3
"lib1","SARS-CoV-2","TATAGGATTTCAACTT",8,52.99,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","I88G P169F",2
"lib1","SARS-CoV-2","TATAGGCAACTTCTAA",6,51.88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I28E V37R N109T G116Y",4
"lib1","SARS-CoV-2","TATAGGCAGTTCGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T63* Y121K K128I T170N",4
"lib1","SARS-CoV-2","TATAGGCCACCGCAAA",6,24.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6Y K94I",2
"lib1","SARS-CoV-2","TATAGGCCAGTCACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S C61T I104Q",3
"lib1","SARS-CoV-2","TATAGGCTAGTCGTCC",2,43.98,10.6,-0.16,0.05,2.94,1,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","TATAGGCTGCCACAAA",2,30.23,10.09,-0.68,0.18,1.67,1.01,0.01,">1 nonsynonymous","I28K S41T",2
"lib1","SARS-CoV-2","TATAGGGACCAAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* A14M G101V L122M K198P",5
"lib1","SARS-CoV-2","TATAGGGACCAGACTA",1,10.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91L F99I",2
"lib1","SARS-CoV-2","TATAGGGCCCAAAGTG",8,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M Y39L G51P L60R F134R A190Y",6
"lib1","SARS-CoV-2","TATAGGGCGTAACATT",4,24.07,6.08,-4.68,1.41,1.5,1.26,0.04,">1 nonsynonymous","C6K V20S N120R G146W",4
"lib1","SARS-CoV-2","TATAGGGGGACGGAGC",2,22.41,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D34R P82N A89V F167T K199Y",5
"lib1","SARS-CoV-2","TATAGGGTCAAGTAAT",4,28.46,10.45,-0.31,0.11,2.83,1.08,0,">1 nonsynonymous","G116L G196S T201A",3
"lib1","SARS-CoV-2","TATAGGGTCGAAAGGG",5,145.23,10.07,-0.69,0.09,2.13,1.04,0,"1 nonsynonymous","P133L",1
"lib1","SARS-CoV-2","TATAGGGTGCGCCATC",3,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M V20L A33H C49W L95R N110E S139A G166S",8
"lib1","SARS-CoV-2","TATAGGTACACGCTAA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib1","SARS-CoV-2","TATAGGTGAAGATCTA",7,123.45,10.76,0,0.08,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGGTGCATAATAC",3,8.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44R N58I G86E N92T S139V G155V P161W C195M",8
"lib1","SARS-CoV-2","TATAGGTTAGATCAAA",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L W23V F62G F99I Y123M E141P T148L F167T",8
"lib1","SARS-CoV-2","TATAGTAAGCGTTGTC",5,75.77,9.43,-1.33,0.11,1.78,1.12,0,">1 nonsynonymous","V77F D97L",2
"lib1","SARS-CoV-2","TATAGTACAGACGTAC",1,45.14,10.82,0.06,0.09,2.88,1.07,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","TATAGTACTTACCCAA",3,32.55,10.54,-0.22,0.06,2.85,1.04,0,"1 nonsynonymous","N58I",1
"lib1","SARS-CoV-2","TATAGTATCCACTCAG",2,23.32,10.72,-0.05,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGTATCCCCATGC",1,10.76,10.71,-0.05,0.11,2.92,1.01,0.01,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","TATAGTCACCAAGAGC",2,67.85,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33P S41L G86I S129H N151T",5
"lib1","SARS-CoV-2","TATAGTCATATAACTA",5,10.35,8.79,-1.97,0.11,2.13,1,0.01,">1 nonsynonymous","A42Y Y91R Y119S",3
"lib1","SARS-CoV-2","TATAGTCATTCAACCA",2,25.89,9.3,-1.47,0.16,2.41,1.2,0.01,">1 nonsynonymous","T55L D90Y E141P",3
"lib1","SARS-CoV-2","TATAGTCATTCATATA",1,18.08,10.07,-0.69,0.08,2.82,1.02,0,">1 nonsynonymous","S139C F160T",2
"lib1","SARS-CoV-2","TATAGTCGAGTTTATC",3,73.38,6.07,-4.69,0.58,1.5,1.18,0.01,">1 nonsynonymous","S41A A105I G117H I138N F160D P169I T201S",7
"lib1","SARS-CoV-2","TATAGTCGCGTTTATA",3,36.51,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","Y39V N64I A89L R136M",4
"lib1","SARS-CoV-2","TATAGTCTAGTTCCAT",3,82.35,10.8,0.04,0.07,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATAGTCTATAATAAT",2,22.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91G G155S Q168Y V181I",4
"lib1","SARS-CoV-2","TATAGTCTTAATCCAA",7,79.64,8.38,-2.38,0.42,1.5,1,0.05,">1 nonsynonymous","A89V P133Y T140W",3
"lib1","SARS-CoV-2","TATAGTGACATAACCG",8,56.2,6.34,-4.42,0.63,1.5,1.26,0.02,">1 nonsynonymous","G9M A67L G116S R136H P161S",5
"lib1","SARS-CoV-2","TATAGTGCCCACATAT",2,35.11,7.69,-3.07,0.23,1.5,1.05,0.03,">1 nonsynonymous","P82Y K114Q",2
"lib1","SARS-CoV-2","TATAGTGCCTGAAATC",4,39.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55I E76K I104F Y159N",4
"lib1","SARS-CoV-2","TATAGTGCTGAGGAGG",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T D34Y A89Y D112L",4
"lib1","SARS-CoV-2","TATAGTGTTGTTCTTA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","I2L E141A F156P T201*",4
"lib1","SARS-CoV-2","TATAGTTAAAAGTCGG",1,6.33,10.07,-0.7,0.19,2,1.11,0.01,">1 nonsynonymous","Y35E I72L Q163T P197T",4
"lib1","SARS-CoV-2","TATAGTTACCGGCTAC",7,16.86,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","A33T L95T G152I Y159S",4
"lib1","SARS-CoV-2","TATAGTTAGCAGATTG",6,39.15,6,-4.76,1.34,1.87,1.09,0,">1 nonsynonymous","N30S T55Y E76G F156S T170N",5
"lib1","SARS-CoV-2","TATAGTTTCCCATGTT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","T3H L60* P161I",3
"lib1","SARS-CoV-2","TATAGTTTTAAACTAG",12,4.1,NA,NA,NA,NA,NA,NA,"stop","N4I D97* L125D",3
"lib1","SARS-CoV-2","TATATAAAACTCCGAC",7,2.29,NA,NA,NA,NA,NA,NA,"stop","V65E G83* Y143C Q144Y",4
"lib1","SARS-CoV-2","TATATAAAAGTTTCAA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K F70S P82R P96Q",4
"lib1","SARS-CoV-2","TATATAAAGCTGATGG",4,33.55,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A22F I88R",2
"lib1","SARS-CoV-2","TATATAAAGTGAGAAT",13,61.03,6,-4.76,1.15,1.5,1.2,0.01,">1 nonsynonymous","T15S F47W G74S Y91D G152N",5
"lib1","SARS-CoV-2","TATATAAATTTAAAAT",1,12.8,8.94,-1.82,0.38,1.87,1.17,0.06,">1 nonsynonymous","I2H N40S L131M R136T",4
"lib1","SARS-CoV-2","TATATAACAAGACGTA",1,1.69,NA,NA,NA,NA,NA,NA,"stop","N1Q E10I F160*",3
"lib1","SARS-CoV-2","TATATAACCAATAGTA",1,19.2,9.51,-1.25,0.15,2.1,1.05,0.01,">1 nonsynonymous","I2L Y35G A89C",3
"lib1","SARS-CoV-2","TATATAACCGACTTAA",9,89.1,9.02,-1.74,0.08,2.72,1.09,0,">1 nonsynonymous","S41I Y119M K128G",3
"lib1","SARS-CoV-2","TATATAAGAAAATTGT",5,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D A33D F44D W106G",4
"lib1","SARS-CoV-2","TATATAAGAACAAAGT",5,32.68,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G86Q F167E S200L",3
"lib1","SARS-CoV-2","TATATAAGAAGTAGGC",9,2.86,NA,NA,NA,NA,NA,NA,"stop","Y91A N120* C158L",3
"lib1","SARS-CoV-2","TATATAAGCGCATTAA",2,77.7,10.23,-0.53,0.05,2.85,1.06,0,">1 nonsynonymous","R16M S41Y K87N",3
"lib1","SARS-CoV-2","TATATAAGGTTGACAA",4,53.44,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10C G101I",2
"lib1","SARS-CoV-2","TATATAATACAATACA",3,75.81,8.5,-2.26,0.1,2.6,1.14,0,">1 nonsynonymous","V37S S113L",2
"lib1","SARS-CoV-2","TATATAATATTGAGAT",2,17.45,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","F12W V32N S41P K94V K132N F160I",6
"lib1","SARS-CoV-2","TATATAATCCTAATAT",2,39.97,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","R25A V37A T63N G86F",4
"lib1","SARS-CoV-2","TATATAATGTTTCGAC",2,25.71,6.18,-4.59,0.77,1.5,1.14,0.03,">1 nonsynonymous","Y91P S139W",2
"lib1","SARS-CoV-2","TATATACAAAAGGATC",1,22,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","T3V Y93S V103S",3
"lib1","SARS-CoV-2","TATATACACAAATGAC",6,70.41,6,-4.76,0.43,3,1.14,0,">1 nonsynonymous","N64L D75V F156K F167K",4
"lib1","SARS-CoV-2","TATATACACTTGAAAC",1,19.99,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","N1K D68W I138S",3
"lib1","SARS-CoV-2","TATATACAGTCACAAT",1,54.19,10.72,-0.04,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATATACATATCCCCG",2,32.4,7.54,-3.22,0.37,1.5,1,0.04,">1 nonsynonymous","T46Y C150N",2
"lib1","SARS-CoV-2","TATATACATCTTGCAA",10,144.81,10.77,0.01,0.05,2.9,1.05,0,"1 nonsynonymous","T100C",1
"lib1","SARS-CoV-2","TATATACATGAAATCT",2,45.78,9.07,-1.7,0.1,1.94,1.11,0.01,">1 nonsynonymous","T85M Y91V N171S",3
"lib1","SARS-CoV-2","TATATACATGTATCTA",1,17.25,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N107I V180N",2
"lib1","SARS-CoV-2","TATATACCCAAACACA",4,111.66,10.79,0.03,0.06,2.92,1.03,0,">1 nonsynonymous","K128N K198A",2
"lib1","SARS-CoV-2","TATATACGAAACAATG",5,26.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P96E N110R Y143K K198R",4
"lib1","SARS-CoV-2","TATATACGAATAAAAT",5,47.91,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","P169S G174N R179T",3
"lib1","SARS-CoV-2","TATATACGACAGTAAA",1,23.61,6.35,-4.42,0.27,1.72,1.05,0,">1 nonsynonymous","F8M C49H D98T",3
"lib1","SARS-CoV-2","TATATACGGTAACAAA",3,17.99,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","P54L A89F D98I A105D",4
"lib1","SARS-CoV-2","TATATACTATCGTAAT",6,21.37,6.79,-3.98,0.31,1.5,1.05,0.02,">1 nonsynonymous","T15E C49N N120Y",3
"lib1","SARS-CoV-2","TATATACTTCTAACCA",2,16.13,10.31,-0.45,0.08,2.91,1.03,0,"1 nonsynonymous","N13T",1
"lib1","SARS-CoV-2","TATATAGAAAAACCAT",4,27.11,9.36,-1.41,0.32,1.5,1.14,0.05,">1 nonsynonymous","A14R N40S D59L L122E Q144L",5
"lib1","SARS-CoV-2","TATATAGAAGCCCAAA",6,73.98,10.7,-0.06,0.05,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATATAGACCCCTGAA",5,41.39,10.33,-0.43,0.07,2.92,1.02,0,"1 nonsynonymous","F17M",1
"lib1","SARS-CoV-2","TATATAGATAAGGCAC",8,78.9,10.74,-0.03,0.05,2.91,1.04,0,"1 nonsynonymous","N4S",1
"lib1","SARS-CoV-2","TATATAGATAGACGGC",4,9.59,6,-4.76,2,3,1.19,0.06,">1 nonsynonymous","T55P Y123D K128V V181K",4
"lib1","SARS-CoV-2","TATATAGATTAGGTCC",2,86.75,9.28,-1.49,0.08,2.4,1.14,0,">1 nonsynonymous","N107M N120Q",2
"lib1","SARS-CoV-2","TATATAGCAAAACTGT",2,40.68,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A67V P161I",2
"lib1","SARS-CoV-2","TATATAGCAATTTGCA",10,109.39,9.54,-1.22,0.13,1.73,1.15,0.01,">1 nonsynonymous","L5Y R127M",2
"lib1","SARS-CoV-2","TATATAGCTACACTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F12S F99T P161* L183D T201A",5
"lib1","SARS-CoV-2","TATATAGCTGTAACCA",2,18.85,6,-4.76,2,3,1.26,0.03,">1 nonsynonymous","T63Y A89Y N107A Y165C",4
"lib1","SARS-CoV-2","TATATAGGAACCCGCC",7,48.1,10.09,-0.67,0.08,2.75,1.02,0,"1 nonsynonymous","Y121S",1
"lib1","SARS-CoV-2","TATATAGGAATATGCT",2,18.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T46R D59W T100L R127Q",4
"lib1","SARS-CoV-2","TATATAGGATTCCAAA",2,41.35,10.77,0.01,0.06,2.85,1.1,0,"1 nonsynonymous","C61Q",1
"lib1","SARS-CoV-2","TATATAGTTTTAACCA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A A81D K87M P197S",4
"lib1","SARS-CoV-2","TATATATAACAATGGT",8,43.76,6.91,-3.86,0.23,1.66,1.18,0.01,">1 nonsynonymous","L5S L38F P149W P161G",4
"lib1","SARS-CoV-2","TATATATACACGCAAA",2,35.86,10.77,0,0.08,2.85,1.07,0,"1 nonsynonymous","K114W",1
"lib1","SARS-CoV-2","TATATATACCAGGCTT",3,1.33,NA,NA,NA,NA,NA,NA,"stop","G9K S29Q I80* Y143T",4
"lib1","SARS-CoV-2","TATATATATCCTACTG",1,23.8,10.6,-0.17,0.05,2.87,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TATATATCCATGGTAC",2,54.7,9.85,-0.92,0.07,2.79,1.01,0,">1 nonsynonymous","Y121C F160K S200C",3
"lib1","SARS-CoV-2","TATATATCTGGACCGT",3,31.62,9.77,-0.99,0.13,2.49,1.06,0.01,">1 nonsynonymous","T15C E154M",2
"lib1","SARS-CoV-2","TATATATCTGTCAGCG",2,0.24,NA,NA,NA,NA,NA,NA,"stop","F44D C61V S69* S184K",4
"lib1","SARS-CoV-2","TATATATGGATTAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* N64S S129L F156* T170F",5
"lib1","SARS-CoV-2","TATATATGGGCAGACC",2,10.7,6.45,-4.31,0.64,1.5,1.15,0.07,">1 nonsynonymous","A22E R27W L95F E141A F156T G166F",6
"lib1","SARS-CoV-2","TATATATGTACCGAGG",3,8.54,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56E N107R L183N",3
"lib1","SARS-CoV-2","TATATATGTGAAAATA",8,201.88,10.38,-0.39,0.03,2.85,1.04,0,">1 nonsynonymous","T63Y A81E",2
"lib1","SARS-CoV-2","TATATATGTGCACTAG",7,40.07,9.38,-1.38,0.14,1.99,1.14,0.01,">1 nonsynonymous","V11A C61T I104V",3
"lib1","SARS-CoV-2","TATATATTACAAACGG",3,23.5,8.67,-2.09,0.22,1.5,1.01,0.03,">1 nonsynonymous","A18P S29Q L60F P133L",4
"lib1","SARS-CoV-2","TATATATTACAATGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W C61T N64K P96A R127T",5
"lib1","SARS-CoV-2","TATATATTTAGTAGTT",4,86.64,10.29,-0.47,0.03,2.99,1,0,">1 nonsynonymous","N4G Y119F I138T Q163A",4
"lib1","SARS-CoV-2","TATATCAAACGAACTA",3,15.52,9.09,-1.67,0.09,2.89,1.08,0,">1 nonsynonymous","N58D G117T N130S T148L",4
"lib1","SARS-CoV-2","TATATCAAGAGATGTA",6,53.6,10.82,0.06,0.06,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TATATCAATGGTATAT",1,187.51,9.8,-0.97,0.03,2.9,1.06,0,">1 nonsynonymous","Y119K K128R",2
"lib1","SARS-CoV-2","TATATCACACATCCAT",4,35.67,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F44A G86N G116D I142Q V181R",5
"lib1","SARS-CoV-2","TATATCACGAAATATA",7,187.75,7.22,-3.55,0.23,1.5,1.15,0.01,">1 nonsynonymous","A33Y N64Y A81L Y175R",4
"lib1","SARS-CoV-2","TATATCAGAGGCCATC",4,34.51,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F99S A192T",2
"lib1","SARS-CoV-2","TATATCATAAATAAAT",1,15.39,6,-4.76,2,3,1.12,0.03,">1 nonsynonymous","G51V D98T Y123E P149G N171Y",5
"lib1","SARS-CoV-2","TATATCATCGCCCGAT",1,2.13,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TATATCCAAAGCATGG",1,19.83,8.63,-2.14,0.15,1.53,1.07,0.02,">1 nonsynonymous","A105D K114V P197K",3
"lib1","SARS-CoV-2","TATATCCAAATAAAAA",6,26.44,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A14T S19F I80C",3
"lib1","SARS-CoV-2","TATATCCACGTACACC",5,30.71,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","G86S D112K",2
"lib1","SARS-CoV-2","TATATCCATAGAAAAG",8,3.78,NA,NA,NA,NA,NA,NA,"stop","N1S T55V W106L C195*",4
"lib1","SARS-CoV-2","TATATCCCCAAGACAA",3,7.28,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","C61P N107F G152D",3
"lib1","SARS-CoV-2","TATATCCCTAATCTAG",1,58.83,9.21,-1.55,0.07,2.84,1.11,0,">1 nonsynonymous","Y91L T170R",2
"lib1","SARS-CoV-2","TATATCCGGCGTTGAA",1,24.49,9.31,-1.46,0.25,1.79,1.07,0.03,"1 nonsynonymous","S69E",1
"lib1","SARS-CoV-2","TATATCGCAACTTAGG",3,49.63,10.65,-0.12,0.06,2.88,1.08,0,">1 nonsynonymous","S164K T170Q",2
"lib1","SARS-CoV-2","TATATCGCAATGCGAT",4,68.52,10.23,-0.53,0.04,2.94,1,0,">1 nonsynonymous","K48S Y91W P197M",3
"lib1","SARS-CoV-2","TATATCGCAATTATAC",3,7.16,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","A81P G155V",2
"lib1","SARS-CoV-2","TATATCGCGGGGCATA",3,16.33,6.25,-4.52,1.4,1.5,1.22,0.06,">1 nonsynonymous","S19K N118I",2
"lib1","SARS-CoV-2","TATATCGCGTAAAACT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","E10L V37M P149L V180*",4
"lib1","SARS-CoV-2","TATATCGTAACTAAAA",5,33.81,8.83,-1.94,0.1,2.75,1.09,0,"1 nonsynonymous","N157L",1
"lib1","SARS-CoV-2","TATATCGTTTTCTCGT",6,64.9,6.21,-4.56,0.41,1.5,1.14,0.01,">1 nonsynonymous","Y50M Y143V G174S",3
"lib1","SARS-CoV-2","TATATCTACAAAAAAG",1,0.21,NA,NA,NA,NA,NA,NA,"stop","F70* D90I N110R R124A",4
"lib1","SARS-CoV-2","TATATCTACTACGTGT",12,148.33,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E141M N157I",2
"lib1","SARS-CoV-2","TATATCTAGCATGACC",1,0.74,NA,NA,NA,NA,NA,NA,"stop","E10* Y39S Y93W G101V L131W G166V",6
"lib1","SARS-CoV-2","TATATCTAGGCAACGA",5,31.69,9.78,-0.99,0.13,1.94,1.06,0.01,">1 nonsynonymous","T3L L60T D90G",3
"lib1","SARS-CoV-2","TATATCTCTATGAACA",1,54.19,10.75,-0.01,0.09,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATATCTTGATAAAAC",1,11.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5T W23R A89N T100R N151I",5
"lib1","SARS-CoV-2","TATATGAAAGCTACAA",1,27.16,10.76,0,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TATATGAAGCAAACGC",4,16.12,6,-4.76,2,3,1.31,0.02,">1 nonsynonymous","T3R Q79K D90P T148L Y165P",5
"lib1","SARS-CoV-2","TATATGAATAGGTCTG",12,162.85,9.53,-1.24,0.13,1.82,1.12,0.01,">1 nonsynonymous","A14E N58F D90R",3
"lib1","SARS-CoV-2","TATATGAATTTTGGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A22* P96S",2
"lib1","SARS-CoV-2","TATATGACAAGTCAGT",1,41,9.69,-1.08,0.1,2.22,1.11,0,">1 nonsynonymous","G9R N107K N120S",3
"lib1","SARS-CoV-2","TATATGACCATATATG",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N Y143A Y159Q",3
"lib1","SARS-CoV-2","TATATGACCTTGATTT",3,14.23,NA,NA,NA,NA,NA,NA,"stop","C61F D98L A105S L111E Y143* Y178E",6
"lib1","SARS-CoV-2","TATATGACTATTAGAT",4,22.07,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","V20R V173I",2
"lib1","SARS-CoV-2","TATATGAGAACTATAC",2,131.4,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4M N30I L131Y",3
"lib1","SARS-CoV-2","TATATGAGCAGTAGGA",1,10.81,10.84,0.08,0.09,2.93,1.04,0,">1 nonsynonymous","F47V N130D F160A P197L",4
"lib1","SARS-CoV-2","TATATGATACAACCAG",12,63.25,9.82,-0.95,0.12,1.73,1.06,0,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TATATGATATGATCAC",2,55.89,6,-4.76,1.13,1.5,1.2,0.01,">1 nonsynonymous","D90G D112Y",2
"lib1","SARS-CoV-2","TATATGATCCAGTAAA",1,89.97,10.28,-0.49,0.05,2.92,1,0,">1 nonsynonymous","N107S T201L",2
"lib1","SARS-CoV-2","TATATGATGAGCACAA",4,9.89,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L5I C49G W106A V173G",4
"lib1","SARS-CoV-2","TATATGATTAGAAAAC",6,32.95,9.44,-1.32,0.2,1.83,1.2,0.02,">1 nonsynonymous","T15R F44I P54V W106L",4
"lib1","SARS-CoV-2","TATATGCACTCCTCAT",3,18.43,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S19L G74S",2
"lib1","SARS-CoV-2","TATATGCCTATACAAC",2,14.03,10.32,-0.44,0.04,2.98,1.02,0,">1 nonsynonymous","V32L T100S",2
"lib1","SARS-CoV-2","TATATGGACAAGTCGC",4,30.09,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V32R K56M D68L R73K K94I",5
"lib1","SARS-CoV-2","TATATGGATCCAGAAA",3,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134L G166C",2
"lib1","SARS-CoV-2","TATATGGCTAAGACTT",11,63.56,7.51,-3.25,0.17,1.5,1.12,0.01,">1 nonsynonymous","Y21S C61R S129G T170K",4
"lib1","SARS-CoV-2","TATATGGTAGATATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M T15L G83T S113L N120F",5
"lib1","SARS-CoV-2","TATATGTAATTAATCG",3,18.74,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T3S A105K F134I",3
"lib1","SARS-CoV-2","TATATGTACAGACGTT",2,13.16,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","E76T V103R P133S G174P",4
"lib1","SARS-CoV-2","TATATGTACAGGGACC",2,14.83,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37T C49Y N64L D90Y F167Y",5
"lib1","SARS-CoV-2","TATATGTATATTACAT",5,57.84,9.96,-0.8,0.06,2.08,1.06,0,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","TATATGTATGATCCAA",2,7.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16H N107Q F134G S164L",4
"lib1","SARS-CoV-2","TATATGTCAACCCTAA",1,15.21,10.61,-0.16,0.04,2.87,1.05,0,">1 nonsynonymous","E10K D90N",2
"lib1","SARS-CoV-2","TATATGTCGACTTGAT",1,13.35,6.57,-4.19,0.55,2.13,1.23,0.03,">1 nonsynonymous","I2Y S41Y Y143S C150I F167L",5
"lib1","SARS-CoV-2","TATATGTGAATATCAA",1,45.1,10.8,0.04,0.1,2.78,1.16,0,">1 nonsynonymous","K132M K199S",2
"lib1","SARS-CoV-2","TATATGTGCTAACCCT",6,115.26,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R136P S147N C150D F167S Y175M V181M",6
"lib1","SARS-CoV-2","TATATGTGGCAACACT",3,20.11,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","R27A L95S",2
"lib1","SARS-CoV-2","TATATGTGGGATTCAA",1,4.02,NA,NA,NA,NA,NA,NA,"stop","G9* S41K T46S P96S L188V",5
"lib1","SARS-CoV-2","TATATGTGTCCAAAAA",3,86.68,10.66,-0.11,0.08,2.94,1.03,0,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","TATATGTTATAAACAA",9,28.06,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","F99Q",1
"lib1","SARS-CoV-2","TATATGTTGTAATTAA",1,6.19,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","L5A V103Y Y121V",3
"lib1","SARS-CoV-2","TATATTAAGCCCAGTA",6,185.46,10.68,-0.09,0.06,2.92,1.04,0,"1 nonsynonymous","N64W",1
"lib1","SARS-CoV-2","TATATTACATAATGCT",4,73.97,10.8,0.03,0.07,2.89,1.05,0,"1 nonsynonymous","R16I",1
"lib1","SARS-CoV-2","TATATTAGCAAGGGAA",1,10.51,8.1,-2.67,0.2,2.94,1.2,0.02,">1 nonsynonymous","Y35I G117Q G174W",3
"lib1","SARS-CoV-2","TATATTAGCCGTGAGG",1,36.82,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","C6S L162Q",2
"lib1","SARS-CoV-2","TATATTAGGCCTACAA",3,68.1,10.01,-0.75,0.06,2.64,1.07,0,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","TATATTAGTCTCAAAA",3,0.47,NA,NA,NA,NA,NA,NA,"stop","P7A D68* Y121F G146N",4
"lib1","SARS-CoV-2","TATATTATAAGGACGT",3,75.45,10.73,-0.04,0.05,2.94,1.02,0,"1 nonsynonymous","V173D",1
"lib1","SARS-CoV-2","TATATTATAATCATAC",5,68.33,10.52,-0.25,0.05,2.87,1.04,0,">1 nonsynonymous","R27I K94A",2
"lib1","SARS-CoV-2","TATATTATACGGGGGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H F47H A81Y D98I",4
"lib1","SARS-CoV-2","TATATTATATTAGATT",3,26.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S43L F47L I80K A190R",4
"lib1","SARS-CoV-2","TATATTATATTATCGA",3,48.88,9.97,-0.8,0.09,1.86,1.03,0,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","TATATTATCCATGCAA",2,13.58,8.57,-2.19,0.13,2,1.07,0.01,">1 nonsynonymous","F8Q K87C",2
"lib1","SARS-CoV-2","TATATTATGCTAAAAA",6,55.4,6.5,-4.27,0.45,1.5,1.16,0.02,">1 nonsynonymous","E10L V65P G116A F134R",4
"lib1","SARS-CoV-2","TATATTCAAACTTACT",6,114.19,6,-4.76,1.4,1.5,1.18,0.01,"1 nonsynonymous","P161R",1
"lib1","SARS-CoV-2","TATATTCAATTGAACC",4,428.9,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D98I V103E Y175F",3
"lib1","SARS-CoV-2","TATATTCACTTTACTA",2,39.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y39M L60S P82V G155L",4
"lib1","SARS-CoV-2","TATATTCATCAGATTA",1,11.66,6,-4.76,2,1.5,1.07,0.03,">1 nonsynonymous","A33C Y39L Y91L N107F N120W R127L L183Q",7
"lib1","SARS-CoV-2","TATATTCCTTACCTCT",5,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T T55R C61S I88G W106K E135Y T170A",7
"lib1","SARS-CoV-2","TATATTCGAACGCAAG",3,15.86,6,-4.76,0.5,3,1.04,0,">1 nonsynonymous","C6V K87Y Y119R F167Q V173G L187P",6
"lib1","SARS-CoV-2","TATATTCGCAACTGGT",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140V P197Q",2
"lib1","SARS-CoV-2","TATATTCGCTACACAT",1,55.1,8.35,-2.41,0.19,2.31,1.12,0.02,">1 nonsynonymous","S36A C61P G83S Y119I",4
"lib1","SARS-CoV-2","TATATTCGTAATTGTG",7,81.72,10.88,0.12,0.07,2.92,1.04,0,">1 nonsynonymous","E141F P197L",2
"lib1","SARS-CoV-2","TATATTCGTGGTCCCC",11,229.48,10.77,0.01,0.06,2.94,1.01,0,"1 nonsynonymous","V173N",1
"lib1","SARS-CoV-2","TATATTCTACTCTCTG",6,102.9,10.75,-0.01,0.07,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TATATTCTTTGAATCC",8,25.4,6,-4.76,1.57,3,1.26,0.01,">1 nonsynonymous","L57A F70R V103H",3
"lib1","SARS-CoV-2","TATATTGAAAGAAAAA",1,40.11,10.79,0.03,0.07,2.97,1.02,0,">1 nonsynonymous","N64S R78H",2
"lib1","SARS-CoV-2","TATATTGACGGCAACC",1,5.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49A L57W",2
"lib1","SARS-CoV-2","TATATTGAGCACTGAG",7,30.9,6.76,-4,0.37,1.5,1.08,0.02,">1 nonsynonymous","L5R N13D S19M Q84H A89E N157V N171H T201Y",8
"lib1","SARS-CoV-2","TATATTGATATTAGAG",2,23.75,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12L C49G R127G T201N",4
"lib1","SARS-CoV-2","TATATTGCAAAACCCC",5,86.78,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S69D I138G Y165E",3
"lib1","SARS-CoV-2","TATATTGCAGACTCGA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","Y21G Y35A K114* E154V",4
"lib1","SARS-CoV-2","TATATTGCTACCTTTG",7,56.99,6,-4.76,1.11,1.5,1.15,0,">1 nonsynonymous","I28S K87N Y159D",3
"lib1","SARS-CoV-2","TATATTGGTATCGGTG",7,34.99,10.33,-0.43,0.07,2.86,1.03,0,"1 nonsynonymous","G155C",1
"lib1","SARS-CoV-2","TATATTGTACGTCCCT",25,145.02,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","S45I G101N",2
"lib1","SARS-CoV-2","TATATTGTATACTAAG",8,97.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R G174N",2
"lib1","SARS-CoV-2","TATATTGTCAATCTTA",4,7.06,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N13Y V71R I88K N120P",4
"lib1","SARS-CoV-2","TATATTGTCACCTATC",3,18.56,7.45,-3.32,0.29,1.5,1,0.03,">1 nonsynonymous","K94V N120L R136W",3
"lib1","SARS-CoV-2","TATATTGTTGATCGCA",1,23.16,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S108P T148I",2
"lib1","SARS-CoV-2","TATATTTACCAGTAAC",1,16.21,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","Y39H C102Q",2
"lib1","SARS-CoV-2","TATATTTAGCTAAAAA",1,14.35,10.76,-0.01,0.16,2.94,1.05,0.01,">1 nonsynonymous","R16F T55L S200I",3
"lib1","SARS-CoV-2","TATATTTCAGAGATTA",1,11.32,10.85,0.09,0.1,2.86,1.05,0,">1 nonsynonymous","S41T K132C",2
"lib1","SARS-CoV-2","TATATTTCCACCATTA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152F",1
"lib1","SARS-CoV-2","TATATTTCCACGACTA",5,14.89,6.02,-4.75,2,1.5,1.22,0.08,"1 nonsynonymous","I72P",1
"lib1","SARS-CoV-2","TATATTTCTAAATACG",4,47.16,9.43,-1.33,0.11,2.37,1.1,0,">1 nonsynonymous","N107T S129R",2
"lib1","SARS-CoV-2","TATATTTCTTTGCAGG",11,202.9,9.71,-1.05,0.06,2,1.05,0,">1 nonsynonymous","S45I V77M",2
"lib1","SARS-CoV-2","TATATTTGGCACACGC",13,56.95,9.44,-1.33,0.11,2.03,1.12,0,">1 nonsynonymous","N58Y N107S",2
"lib1","SARS-CoV-2","TATATTTGTAAAAATA",4,18.17,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","V11L V32A S43M A67S P82Q T85K F99L",7
"lib1","SARS-CoV-2","TATATTTTATTAAAAC",13,223.26,10.34,-0.42,0.03,2.93,1.02,0,"1 nonsynonymous","G166A",1
"lib1","SARS-CoV-2","TATATTTTGATAGGGG",2,21.95,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","L95K T100Y",2
"lib1","SARS-CoV-2","TATCAAAAAATCCCAA",4,38.32,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","K48M G86E C150T",3
"lib1","SARS-CoV-2","TATCAAAAATTCCCCC",4,38.65,6,-4.76,2,1.5,1.36,0.08,">1 nonsynonymous","C31L T85A W106P",3
"lib1","SARS-CoV-2","TATCAAAATATGTCCG",11,219.35,9.13,-1.64,0.13,1.85,1.13,0.01,">1 nonsynonymous","Y91S Y121F T140R",3
"lib1","SARS-CoV-2","TATCAAAATCATCCAA",1,10.21,10.08,-0.68,0.21,1.98,1.09,0.02,"1 nonsynonymous","V11N",1
"lib1","SARS-CoV-2","TATCAAACAACAAAAC",2,65.97,10.72,-0.04,0.07,2.94,1.04,0,">1 nonsynonymous","S53L I138L",2
"lib1","SARS-CoV-2","TATCAAACATACAAGG",1,14.84,8.76,-2,0.26,1.5,1.05,0.04,">1 nonsynonymous","L5V A89C Y121N",3
"lib1","SARS-CoV-2","TATCAAACATGATAAG",5,4.31,NA,NA,NA,NA,NA,NA,"stop","F12P T46V F70S A81T Q84C P96* Q168R",7
"lib1","SARS-CoV-2","TATCAAACCACTGCAC",4,35.66,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","N13L Y143M C150F T201L",4
"lib1","SARS-CoV-2","TATCAAACCATCAAAA",4,38.91,9.94,-0.82,0.06,2.83,1,0,">1 nonsynonymous","N4L P169F",2
"lib1","SARS-CoV-2","TATCAAACTTCTTCTC",5,153.42,10.51,-0.25,0.05,2.86,1.06,0,"1 nonsynonymous","N4F",1
"lib1","SARS-CoV-2","TATCAAAGAAGGTCAA",1,18.05,6.37,-4.4,0.72,1.5,1.1,0.04,">1 nonsynonymous","W23S Y35S V173S V180D",4
"lib1","SARS-CoV-2","TATCAAAGCAGATTGT",1,23.03,7.52,-3.24,0.42,1.5,1.05,0.06,">1 nonsynonymous","D98Q A105L",2
"lib1","SARS-CoV-2","TATCAAAGGTGGCATG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","S19* R136P",2
"lib1","SARS-CoV-2","TATCAAAGTGCGCATG",2,53.87,10.69,-0.07,0.05,2.92,1.02,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","TATCAAATAAAGCCTT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","G9A N13K V20E S45* Q84A G116Q",6
"lib1","SARS-CoV-2","TATCAAATCAAAAACA",3,76.14,8.71,-2.05,0.13,2.39,1.12,0.01,">1 nonsynonymous","Y121T Q168N",2
"lib1","SARS-CoV-2","TATCAAATGACACGAA",6,74.64,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9L A89L S147M T201L",4
"lib1","SARS-CoV-2","TATCAAATGAGCACCT",8,97.06,10.53,-0.23,0.08,2.82,1.09,0,">1 nonsynonymous","N151I S200V",2
"lib1","SARS-CoV-2","TATCAAATGTCGAACA",2,2.24,NA,NA,NA,NA,NA,NA,"stop","G116I Q144*",2
"lib1","SARS-CoV-2","TATCAACCACATGACA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","F8T G74K C102V I138*",4
"lib1","SARS-CoV-2","TATCAACCCCACTATC",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F V65S",2
"lib1","SARS-CoV-2","TATCAACCGATAAATA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q S36V P54E G83W V115M",5
"lib1","SARS-CoV-2","TATCAACCTAGTAAAA",1,18.44,8.31,-2.45,0.27,1.5,1,0.03,">1 nonsynonymous","E10L W106R I138Q",3
"lib1","SARS-CoV-2","TATCAACGAATCCCAG",15,67.81,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","I2S E10F T55I G86S R179M",5
"lib1","SARS-CoV-2","TATCAACGGCTAATTG",8,44.98,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","Y50R G83I",2
"lib1","SARS-CoV-2","TATCAACTAAGAAGTT",2,24.14,9.01,-1.76,0.24,1.72,1.25,0.02,">1 nonsynonymous","K94G N130M S200L",3
"lib1","SARS-CoV-2","TATCAACTATGAGTGG",5,43.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105T S139L F167A",3
"lib1","SARS-CoV-2","TATCAAGAAGAAGTTT",1,26.3,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","S41P K48S T63M R78I W106S",5
"lib1","SARS-CoV-2","TATCAAGAATAGGGAT",5,1.15,NA,NA,NA,NA,NA,NA,"stop","L5M D68L D97* E135M T201K",5
"lib1","SARS-CoV-2","TATCAAGAGATTTATA",2,21.16,9.34,-1.43,0.1,2.75,1.12,0,">1 nonsynonymous","Q168L S200C",2
"lib1","SARS-CoV-2","TATCAAGCATAAGTAA",8,200.91,10.7,-0.06,0.05,2.89,1.05,0,"1 nonsynonymous","T140L",1
"lib1","SARS-CoV-2","TATCAAGCGAATACGA",2,20.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47A N107S T201S",3
"lib1","SARS-CoV-2","TATCAAGCGGTAAGTA",7,123.62,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S N58E N92W S113V S129I",5
"lib1","SARS-CoV-2","TATCAAGGGGTTCACA",12,109.71,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S45C N92M",2
"lib1","SARS-CoV-2","TATCAAGGGTCGAGGA",5,165.4,10.36,-0.4,0.03,2.8,1.03,0,">1 nonsynonymous","F44L I138R V173L",3
"lib1","SARS-CoV-2","TATCAAGGTCCCGCAC",10,144.29,6,-4.76,1.38,1.5,1.16,0.01,">1 nonsynonymous","Y119Q E141P E154F G174R",4
"lib1","SARS-CoV-2","TATCAATAACTGTATA",4,48.66,8.2,-2.56,0.17,2.31,1.11,0.01,">1 nonsynonymous","I2G P7D Y159N V182I K198Q",5
"lib1","SARS-CoV-2","TATCAATATAGCGAAA",8,134.45,10.69,-0.07,0.1,2.78,1.14,0,"1 nonsynonymous","S36D",1
"lib1","SARS-CoV-2","TATCAATCACCCATCC",8,25.06,9.36,-1.4,0.11,1.99,1.05,0.01,">1 nonsynonymous","A33F Y50L N64I D97G",4
"lib1","SARS-CoV-2","TATCAATCAGGGCTAC",1,27.67,10.73,-0.03,0.04,2.95,1.01,0,">1 nonsynonymous","T85V D98H",2
"lib1","SARS-CoV-2","TATCAATCGTTCCAAA",6,85.15,9.9,-0.86,0.08,2.1,1.06,0,">1 nonsynonymous","L60S V180M",2
"lib1","SARS-CoV-2","TATCAATGAATAAAAC",2,19.88,8.85,-1.92,0.23,1.5,1.28,0.03,">1 nonsynonymous","L5T K128F V181M",3
"lib1","SARS-CoV-2","TATCAATGACAACACA",7,1.11,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","TATCAATGCAGCCTGT",5,83.82,9.9,-0.87,0.1,2.69,1.12,0,">1 nonsynonymous","F8L D59Y P169L E186D",4
"lib1","SARS-CoV-2","TATCAATGGATATAGC",11,105.87,9.84,-0.92,0.09,2.12,1.08,0,">1 nonsynonymous","F12A T201M",2
"lib1","SARS-CoV-2","TATCAATGGGGTAAAG",5,54.37,10.86,0.09,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCAATTAAGAACAT",2,16.67,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9I D90M A105P",3
"lib1","SARS-CoV-2","TATCAATTGGTGAAAC",2,51.09,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R25F A42W C61N Y143L",4
"lib1","SARS-CoV-2","TATCACAAAAATACAA",6,10.93,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","F12S L125H S139C F160Q",4
"lib1","SARS-CoV-2","TATCACAAACCACGTA",1,10.11,9.13,-1.63,0.2,2.46,1.2,0.02,">1 nonsynonymous","D34S F156G",2
"lib1","SARS-CoV-2","TATCACAAGCCCACAC",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122K K128R",2
"lib1","SARS-CoV-2","TATCACAAGGAATTAG",5,1.12,NA,NA,NA,NA,NA,NA,"stop","C6R D59V F160*",3
"lib1","SARS-CoV-2","TATCACAATGATAATA",7,137.63,6,-4.76,1.62,1.5,1.14,0,">1 nonsynonymous","F47Y G83D D90N Y175L A192S",5
"lib1","SARS-CoV-2","TATCACAATTAGAGTT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H S41H D75R P96S",4
"lib1","SARS-CoV-2","TATCACACAAGGAAAC",2,36.21,10.53,-0.23,0.05,2.92,1,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","TATCACACCTAGTCGA",5,19.17,7.62,-3.14,0.26,1.5,1.14,0.03,">1 nonsynonymous","R127T N171C",2
"lib1","SARS-CoV-2","TATCACAGATGTCTTA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","V11C D34R D75V F156*",4
"lib1","SARS-CoV-2","TATCACATAACTAGAT",3,46.38,6.81,-3.96,0.17,1.76,1.13,0.01,">1 nonsynonymous","C6S C31I N157L",3
"lib1","SARS-CoV-2","TATCACATAGGGTAGG",3,48.6,8.77,-2,0.21,1.81,1.17,0.02,">1 nonsynonymous","D90T G155A S184L",3
"lib1","SARS-CoV-2","TATCACATTAATTATA",4,1.52,NA,NA,NA,NA,NA,NA,"stop","C49* F70S I88S G174R",4
"lib1","SARS-CoV-2","TATCACATTTAAGTAA",3,54.45,10.73,-0.03,0.08,2.92,1.08,0,">1 nonsynonymous","I2M V173I T201F",3
"lib1","SARS-CoV-2","TATCACCAATTAAACT",3,48.5,10.23,-0.54,0.06,2.88,1,0,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","TATCACCAGGAACTTA",1,22.21,10.51,-0.26,0.13,2.84,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATCACCAGTCAATAG",16,289.42,9.37,-1.4,0.05,2.86,1.08,0,"1 nonsynonymous","N157S",1
"lib1","SARS-CoV-2","TATCACCATAATATAT",2,9.75,9.76,-1.01,0.2,1.84,1.14,0.02,">1 nonsynonymous","N13S N107A",2
"lib1","SARS-CoV-2","TATCACCCTACTAACG",3,15.99,8.02,-2.75,0.2,1.66,1.08,0.01,">1 nonsynonymous","N4W E10D W23Y K94A K199M",5
"lib1","SARS-CoV-2","TATCACCGAGTAATTA",8,135.54,10.81,0.04,0.08,2.92,1.04,0,">1 nonsynonymous","N4T T85R",2
"lib1","SARS-CoV-2","TATCACCGTATCTTAC",2,59.25,9.23,-1.54,0.23,1.5,1.14,0.02,"1 nonsynonymous","E76R",1
"lib1","SARS-CoV-2","TATCACCTAAAACCGT",6,43.41,7.06,-3.7,0.45,1.5,1.21,0.06,">1 nonsynonymous","C49V S129M P161K S184V",4
"lib1","SARS-CoV-2","TATCACGAATAAAGTA",4,78.69,10.23,-0.53,0.05,2.88,1.04,0,"1 nonsynonymous","L57A",1
"lib1","SARS-CoV-2","TATCACGCCACAGCCT",2,11.64,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","L95T F167I V173P",3
"lib1","SARS-CoV-2","TATCACGTAAAGAAGT",7,0.85,NA,NA,NA,NA,NA,NA,"stop","T3* F44V T55Y T148S",4
"lib1","SARS-CoV-2","TATCACGTAAATAACA",4,21.8,7.3,-3.46,0.34,1.5,1.02,0.03,">1 nonsynonymous","V11G C61S Q176S",3
"lib1","SARS-CoV-2","TATCACGTCGGCCTTT",10,5.74,NA,NA,NA,NA,NA,NA,"stop","G9* G74D T148N",3
"lib1","SARS-CoV-2","TATCACTAAAAATAAG",1,30.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Q F167S G172S Y178T",4
"lib1","SARS-CoV-2","TATCACTACAAGTAGA",2,6.24,10.83,0.06,0.08,2.99,1,0,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","TATCACTCCAGATTCC",11,160.9,10.47,-0.29,0.04,2.94,1.01,0,">1 nonsynonymous","F44T L122V",2
"lib1","SARS-CoV-2","TATCACTGTCACACTA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I W106Y",2
"lib1","SARS-CoV-2","TATCAGACACTTGTTC",9,6.7,NA,NA,NA,NA,NA,NA,"stop","I28L Y50A T55* I88K",4
"lib1","SARS-CoV-2","TATCAGAGATAACAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K K128V",2
"lib1","SARS-CoV-2","TATCAGAGGCCCTTAG",5,81.21,10.7,-0.07,0.08,2.76,1.11,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","TATCAGATAGCTAGAC",2,0.96,NA,NA,NA,NA,NA,NA,"stop","T63* Y119D",2
"lib1","SARS-CoV-2","TATCAGATTCTATTGA",9,110.76,10.72,-0.04,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCAGCAGACGACCG",3,14.6,10.53,-0.23,0.12,2.86,1,0,">1 nonsynonymous","E10S N40M Q168A",3
"lib1","SARS-CoV-2","TATCAGCATAACTCAC",5,45.39,9.85,-0.92,0.11,2.49,1.04,0.01,">1 nonsynonymous","C6N N13F",2
"lib1","SARS-CoV-2","TATCAGCCTTAGCCTG",7,120.98,6,-4.76,0.71,1.5,1.15,0,">1 nonsynonymous","D98A P169S Y175L",3
"lib1","SARS-CoV-2","TATCAGCCTTGCGCGC",4,65.97,10.21,-0.55,0.06,2.66,1.01,0,">1 nonsynonymous","N13H G155T N171V",3
"lib1","SARS-CoV-2","TATCAGCTAAAAGAAG",2,139.35,10.82,0.06,0.07,2.87,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TATCAGCTTTATGCAC",1,50.13,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","P177R",1
"lib1","SARS-CoV-2","TATCAGGACAGAGAAA",4,43.63,10.08,-0.69,0.08,2.9,1.02,0,">1 nonsynonymous","Y39W C61H A105G",3
"lib1","SARS-CoV-2","TATCAGGATAACTGCA",6,112,10.72,-0.05,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCAGGATTAGGAGG",2,62.42,8.66,-2.11,0.09,2.9,1.09,0,">1 nonsynonymous","F126Y T170S",2
"lib1","SARS-CoV-2","TATCAGTATTTGTACA",1,80.89,8.59,-2.18,0.12,2.23,1.11,0.01,">1 nonsynonymous","A14L Y119V",2
"lib1","SARS-CoV-2","TATCAGTCTTAGCACG",3,14.56,9.32,-1.44,0.21,1.82,1.07,0.02,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","TATCAGTGAATCCTGT",2,15.9,10.78,0.01,0.05,3,1.01,0,">1 nonsynonymous","V37N T148H",2
"lib1","SARS-CoV-2","TATCAGTGCAATAATG",1,22.27,10.45,-0.31,0.07,2.95,1.03,0,">1 nonsynonymous","A42W D97W",2
"lib1","SARS-CoV-2","TATCATAAACTTGAGA",5,126.5,9.84,-0.92,0.1,2.06,1.07,0,">1 nonsynonymous","C6M D98A",2
"lib1","SARS-CoV-2","TATCATAAGATGACAG",3,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E E141S",2
"lib1","SARS-CoV-2","TATCATACCAAAGGTA",9,94.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P N107V",2
"lib1","SARS-CoV-2","TATCATACCACTTAAG",14,22.11,6.81,-3.96,0.33,1.5,1.1,0.05,">1 nonsynonymous","E10G D34P T100G V103R G174L A192E",6
"lib1","SARS-CoV-2","TATCATACCCTAGCTG",7,89.27,10.31,-0.46,0.06,2.78,1,0,">1 nonsynonymous","Y35G P191C",2
"lib1","SARS-CoV-2","TATCATAGAAACGAGT",2,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R T100H I104D K114R N157S",5
"lib1","SARS-CoV-2","TATCATAGAACCTCGA",3,9.92,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F12S A81S T148N G166T",4
"lib1","SARS-CoV-2","TATCATAGAGCTAGCT",6,91.85,9.01,-1.75,0.16,2.48,1.13,0.01,">1 nonsynonymous","D90F Q168I",2
"lib1","SARS-CoV-2","TATCATAGGCATACAT",2,69.22,9.96,-0.81,0.1,2.21,1.05,0,">1 nonsynonymous","G86N Y175W",2
"lib1","SARS-CoV-2","TATCATAGGCTAAAAA",1,14.73,10.81,0.05,0.05,2.98,1,0,"1 nonsynonymous","E154G",1
"lib1","SARS-CoV-2","TATCATAGTGCCCGCG",1,18.72,9.75,-1.01,0.12,1.84,1.19,0.01,"1 nonsynonymous","G51P",1
"lib1","SARS-CoV-2","TATCATATACATAATA",8,10.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4P Y66S W106T",3
"lib1","SARS-CoV-2","TATCATATCCCGCATT",1,45.66,6.44,-4.32,0.57,1.5,1.17,0.03,">1 nonsynonymous","A67R Q84S L125S R136D G152P Q163V",6
"lib1","SARS-CoV-2","TATCATATTAACATAC",9,97.34,9.47,-1.29,0.11,2.06,1.08,0.01,">1 nonsynonymous","E10M C31W Y39P A42T",4
"lib1","SARS-CoV-2","TATCATCACACTTACA",6,173.69,9.56,-1.2,0.09,2.65,1.12,0,">1 nonsynonymous","N1S N120T",2
"lib1","SARS-CoV-2","TATCATCAGGGGATTG",4,133.37,10.62,-0.14,0.05,2.87,1.06,0,">1 nonsynonymous","I28F C61S Q144R T201C",4
"lib1","SARS-CoV-2","TATCATCAGTGGACAC",2,20.64,10.65,-0.11,0.12,2.98,1,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","TATCATCCCTTACCTC",2,94.35,10.74,-0.02,0.05,2.91,1.04,0,"1 nonsynonymous","V153Y",1
"lib1","SARS-CoV-2","TATCATCCGAGTCGAT",6,55.14,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P7M Y91L P149W Y178L",4
"lib1","SARS-CoV-2","TATCATCCTTTTTCAC",2,8.68,6.75,-4.01,0.17,1.5,1.05,0.01,">1 nonsynonymous","E10S R27D S41M C49L",4
"lib1","SARS-CoV-2","TATCATCGGGTTGGCC",5,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A Y143L E186S",3
"lib1","SARS-CoV-2","TATCATCTTTTATAAT",2,46.78,10.02,-0.74,0.08,2.63,1.07,0,">1 nonsynonymous","A14D S43I P149I",3
"lib1","SARS-CoV-2","TATCATGAAGCTCAGT",5,1.58,NA,NA,NA,NA,NA,NA,"stop","W23V V103M N118I I138* S164R G174M",6
"lib1","SARS-CoV-2","TATCATGATGAGAAGG",3,68.63,10.2,-0.57,0.07,2.81,1,0,"1 nonsynonymous","L57P",1
"lib1","SARS-CoV-2","TATCATGCGACCAACA",2,109.08,10.69,-0.07,0.06,2.88,1.08,0,"1 nonsynonymous","D98A",1
"lib1","SARS-CoV-2","TATCATGGAAACATTC",1,9.39,10.64,-0.13,0.13,2.66,1.05,0.01,"1 nonsynonymous","A89V",1
"lib1","SARS-CoV-2","TATCATGTCAGTAACA",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N K48R I104R",3
"lib1","SARS-CoV-2","TATCATTAAAGAAAAC",2,24.38,8.77,-1.99,0.17,1.5,1.01,0.02,">1 nonsynonymous","T3I V37G I88L E154L",4
"lib1","SARS-CoV-2","TATCATTATTCCGCAA",9,108.65,10.43,-0.33,0.02,2.93,1.02,0,">1 nonsynonymous","A89S T140V T201K",3
"lib1","SARS-CoV-2","TATCATTTAACACGCA",2,32.31,9.62,-1.14,0.09,2.59,1.09,0,">1 nonsynonymous","P7V T55G L131M",3
"lib1","SARS-CoV-2","TATCATTTAGATTAGA",18,278.52,10.82,0.05,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCATTTATCAGGTG",8,36.25,6.59,-4.18,0.5,1.5,1.27,0.03,">1 nonsynonymous","S45D G83C L95R",3
"lib1","SARS-CoV-2","TATCATTTCAAATCAT",8,194.74,10.63,-0.13,0.04,2.82,1.03,0,">1 nonsynonymous","I2Y S41L K198M",3
"lib1","SARS-CoV-2","TATCCAAAAAAGATTA",1,26.98,9.89,-0.87,0.08,2.75,1.07,0,">1 nonsynonymous","A14I F62C Q84K",3
"lib1","SARS-CoV-2","TATCCAAAATTGCCCA",3,1.43,NA,NA,NA,NA,NA,NA,"stop","C49L C158* Y165D",3
"lib1","SARS-CoV-2","TATCCAAACCTAAAAG",20,90.39,6.21,-4.55,0.47,1.5,1.18,0.01,">1 nonsynonymous","Y91T F99V",2
"lib1","SARS-CoV-2","TATCCAAACTTACGAA",6,15.3,8.71,-2.05,0.34,1.5,1.04,0.04,">1 nonsynonymous","L57N W106S",2
"lib1","SARS-CoV-2","TATCCAAAGTGATGAT",2,7.64,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2F R124Q C158V",3
"lib1","SARS-CoV-2","TATCCAACAAAATCCT",5,42.08,7.92,-2.85,0.47,1.5,1,0.08,">1 nonsynonymous","A14N F44V Y93I V153F G174L",5
"lib1","SARS-CoV-2","TATCCAACCCTGTAAG",7,126.55,10.7,-0.06,0.05,2.95,1.01,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","TATCCAACTAGTTAAG",2,37.26,10.43,-0.33,0.06,2.96,1,0,">1 nonsynonymous","P7L L60M I142M",3
"lib1","SARS-CoV-2","TATCCAACTTTTCGCT",7,296.52,9.7,-1.07,0.09,2.51,1.07,0,">1 nonsynonymous","G83L Y121C",2
"lib1","SARS-CoV-2","TATCCAAGCACTACGG",2,11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T46D T55I D90I R179D",4
"lib1","SARS-CoV-2","TATCCAAGCTATCAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V77W K94I S113* V153S E186F",5
"lib1","SARS-CoV-2","TATCCAAGGCATCTAG",13,210.15,10.66,-0.1,0.04,2.93,1.02,0,">1 nonsynonymous","T63K V173W",2
"lib1","SARS-CoV-2","TATCCAAGTTATCCCG",1,23.65,8.96,-1.81,0.23,1.71,1.15,0.02,">1 nonsynonymous","G86C L122K",2
"lib1","SARS-CoV-2","TATCCAATAAAGGTGG",2,28.88,8.39,-2.37,0.34,1.5,1.16,0.05,">1 nonsynonymous","C102V N120I S129F",3
"lib1","SARS-CoV-2","TATCCAATATCTGTGC",1,90.49,10.78,0.02,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCCACAGCCCCTAA",2,20.35,10.73,-0.04,0.07,2.91,1.06,0,">1 nonsynonymous","R27E P149T",2
"lib1","SARS-CoV-2","TATCCACCACAGACTG",3,13.58,10.79,0.02,0.05,2.94,1,0,">1 nonsynonymous","T63V K132A",2
"lib1","SARS-CoV-2","TATCCACCCCACTCAA",2,123.77,9.83,-0.93,0.08,2.45,1.03,0,">1 nonsynonymous","A89V I138S",2
"lib1","SARS-CoV-2","TATCCACCTGAAAAAC",11,5.04,NA,NA,NA,NA,NA,NA,"stop","N118T S184*",2
"lib1","SARS-CoV-2","TATCCAGAATTCCCAC",6,44.2,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","P82H P96S N109T L125S",4
"lib1","SARS-CoV-2","TATCCAGATAGAATTA",3,31.6,10.8,0.03,0.03,2.9,1.05,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","TATCCAGATTGCCGAA",5,144.05,10.85,0.08,0.06,2.94,1.04,0,"1 nonsynonymous","T201V",1
"lib1","SARS-CoV-2","TATCCAGCATGACTAC",3,70.22,6,-4.76,1.79,1.5,1.22,0.02,">1 nonsynonymous","F12I S36V L60H I88M",4
"lib1","SARS-CoV-2","TATCCAGCATTTAGTG",2,14.43,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","S19L T63L P149L P197F",4
"lib1","SARS-CoV-2","TATCCAGCGAAAGCGA",11,91.02,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14V G86L Y93L Y175M",4
"lib1","SARS-CoV-2","TATCCAGCTATTTACA",1,9.94,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S41E G86T K114G C158M L187M T201K",6
"lib1","SARS-CoV-2","TATCCAGGACAAACAA",2,4.76,NA,NA,NA,NA,NA,NA,"stop","K56* D98I",2
"lib1","SARS-CoV-2","TATCCATATAGCGTAC",8,3.2,NA,NA,NA,NA,NA,NA,"stop","A14* V32L F156C G172N",4
"lib1","SARS-CoV-2","TATCCATATATGTAAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","TATCCATCAACTATTC",3,44.84,9.13,-1.63,0.17,1.58,1.14,0.01,">1 nonsynonymous","F17T T63S N109K Q163L",4
"lib1","SARS-CoV-2","TATCCATCGATAAACC",1,22.2,10.21,-0.55,0.18,2.67,1,0.01,">1 nonsynonymous","F8Y P54D C61L S200E",4
"lib1","SARS-CoV-2","TATCCATCTGGTCCTT",2,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y35N G74A K94Y",4
"lib1","SARS-CoV-2","TATCCATGTCTCAGCC",3,0,NA,NA,NA,NA,NA,NA,"stop","A22* P149A Q163H R179K",4
"lib1","SARS-CoV-2","TATCCATTCCGGTACT",7,96.87,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S41T Y91M S113G R179K",4
"lib1","SARS-CoV-2","TATCCATTTATCTAAA",5,32.93,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S19T L95R F134S L188V",4
"lib1","SARS-CoV-2","TATCCCAACACACCGA",10,99.72,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N92L L122F G146N N171S",4
"lib1","SARS-CoV-2","TATCCCAACTATTAAA",1,26.18,8.45,-2.32,0.26,2.45,1.06,0.02,">1 nonsynonymous","S129V T140F T170V",3
"lib1","SARS-CoV-2","TATCCCAAGACTTTTA",3,58.99,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","L5T T55I A81C L95K N107M I138R Y175L",7
"lib1","SARS-CoV-2","TATCCCAAGCGTTGGA",3,20.17,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","Y35P D137V",2
"lib1","SARS-CoV-2","TATCCCAATAAACCTT",2,23.25,10.65,-0.12,0.21,2.73,1.08,0.02,"1 nonsynonymous","R27H",1
"lib1","SARS-CoV-2","TATCCCACTTAAAAGA",15,165.22,10.42,-0.34,0.03,2.91,1.04,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","TATCCCATAGCGGTCA",2,12.01,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","F12T I104V S113K",3
"lib1","SARS-CoV-2","TATCCCGCAAAGCGTA",1,7.91,10.54,-0.22,0.14,2.93,1.03,0.01,">1 nonsynonymous","Y39I P169L",2
"lib1","SARS-CoV-2","TATCCCGCAATCCCCA",12,91.66,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","T63V D137K",2
"lib1","SARS-CoV-2","TATCCCGCATGACGAA",1,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124S",1
"lib1","SARS-CoV-2","TATCCCGCCCTAACAA",4,1.39,NA,NA,NA,NA,NA,NA,"stop","S41* K56S K94I L122* T148S",5
"lib1","SARS-CoV-2","TATCCCGGCGTCGCCT",13,173.86,9.93,-0.83,0.08,2.35,1.05,0,">1 nonsynonymous","S41Q F99Y I104M",3
"lib1","SARS-CoV-2","TATCCCGTAACACTGC",3,36.39,10.69,-0.07,0.08,2.92,1.05,0,">1 nonsynonymous","N1L L122G",2
"lib1","SARS-CoV-2","TATCCCTAATCCCAAG",9,1.5,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib1","SARS-CoV-2","TATCCCTGGGTTGATG",3,33.24,6,-4.76,0.79,3,1.1,0,">1 nonsynonymous","G86P G155L",2
"lib1","SARS-CoV-2","TATCCGAAAAATTGGA",7,72.19,6,-4.76,2,2.73,1.14,0,">1 nonsynonymous","F17C R73F P161S G174W",4
"lib1","SARS-CoV-2","TATCCGAAAGTTGGAT",2,11.29,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V11N F134D P149N F160V S164Y",5
"lib1","SARS-CoV-2","TATCCGAATCGAATAA",13,5.18,NA,NA,NA,NA,NA,NA,"stop","G9L F134* E141T",3
"lib1","SARS-CoV-2","TATCCGACAGACAATG",1,13.69,9.02,-1.74,0.1,2.74,1.04,0.01,">1 nonsynonymous","G117T Q144R",2
"lib1","SARS-CoV-2","TATCCGAGATGTATAT",1,21.78,10.67,-0.1,0.06,2.86,1.09,0,">1 nonsynonymous","N40R T55V",2
"lib1","SARS-CoV-2","TATCCGATAATAATAA",6,59.73,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","C49L F99T",2
"lib1","SARS-CoV-2","TATCCGATATTACTCA",2,15.24,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A22Q F44R I104H T148Q F167K H189T",6
"lib1","SARS-CoV-2","TATCCGCAAATCGGTA",13,31.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K56P V182P",2
"lib1","SARS-CoV-2","TATCCGCCATATAATC",4,71.27,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I88R A145N",2
"lib1","SARS-CoV-2","TATCCGCCCTGGAAAT",4,54.2,9.68,-1.09,0.11,2.01,1.09,0.01,">1 nonsynonymous","K94V A192C P197D",3
"lib1","SARS-CoV-2","TATCCGCCTAAAAGGA",3,67.65,10.59,-0.17,0.04,2.92,1.06,0,">1 nonsynonymous","T55C C61A",2
"lib1","SARS-CoV-2","TATCCGCCTGACAGTG",2,72.46,9.15,-1.61,0.11,2.79,1.13,0,">1 nonsynonymous","I138N T170L",2
"lib1","SARS-CoV-2","TATCCGGACTTACTGA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","TATCCGTACTCGAACC",15,305.31,10.61,-0.15,0.03,2.89,1.04,0,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","TATCCGTATTTCATAA",4,22.2,6.04,-4.73,2,1.5,1.22,0.06,">1 nonsynonymous","A14W S41T K48D G116V",4
"lib1","SARS-CoV-2","TATCCTAACGACTAAA",4,0.72,NA,NA,NA,NA,NA,NA,"stop","V37* T100A Y121M",3
"lib1","SARS-CoV-2","TATCCTAACTAACAAT",4,107.54,8.21,-2.56,0.18,1.57,1.16,0.01,">1 nonsynonymous","T3S A67F Q176S",3
"lib1","SARS-CoV-2","TATCCTACACTCAAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","A14G Y39F G51M K56S D90*",5
"lib1","SARS-CoV-2","TATCCTATAAACCTAT",1,1.95,NA,NA,NA,NA,NA,NA,"stop","N30I T148*",2
"lib1","SARS-CoV-2","TATCCTATATATACCC",3,3.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201E",1
"lib1","SARS-CoV-2","TATCCTATTTGGCGTG",1,15.04,7.94,-2.83,0.33,1.5,1.04,0.06,">1 nonsynonymous","G9V F44D G86A",3
"lib1","SARS-CoV-2","TATCCTCCAAAAAGTA",4,35.19,9.89,-0.87,0.12,2.03,1.07,0.01,">1 nonsynonymous","F99L I104Y",2
"lib1","SARS-CoV-2","TATCCTCCACGAAGTG",3,49.56,10.79,0.03,0.08,2.88,1.06,0,"1 nonsynonymous","K128E",1
"lib1","SARS-CoV-2","TATCCTCGTCACCTAA",5,33.88,8.36,-2.41,0.21,1.5,1.11,0.01,">1 nonsynonymous","F17N T46V",2
"lib1","SARS-CoV-2","TATCCTCTCATAATAG",8,7.22,NA,NA,NA,NA,NA,NA,"stop","K56* G174K",2
"lib1","SARS-CoV-2","TATCCTGAATTCATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K48* K87* P96R I142Q",4
"lib1","SARS-CoV-2","TATCCTGGACATCTAA",1,40.74,10.02,-0.75,0.12,2.67,1.09,0.01,"1 nonsynonymous","S19M",1
"lib1","SARS-CoV-2","TATCCTGGCCTTCACA",14,240.71,9.51,-1.26,0.06,2.85,1.09,0,"1 nonsynonymous","Y119V",1
"lib1","SARS-CoV-2","TATCCTGTAAAATGAT",7,25.23,8.83,-1.93,0.24,1.5,1.1,0.03,">1 nonsynonymous","T15R Y50V",2
"lib1","SARS-CoV-2","TATCCTTATGCAAATA",1,73.89,10.25,-0.52,0.06,2.83,1.07,0,">1 nonsynonymous","C6V P197R",2
"lib1","SARS-CoV-2","TATCCTTGAGTCAAGA",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G V37D D98F E135L",4
"lib1","SARS-CoV-2","TATCCTTTCTTCAAAA",9,2.8,NA,NA,NA,NA,NA,NA,"stop","G9* R27N Y91N G196V",4
"lib1","SARS-CoV-2","TATCCTTTGCAGGAAT",6,109.22,10.84,0.07,0.06,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCGAAAACCTTGCA",4,40.38,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","L60S G101Q K199L",3
"lib1","SARS-CoV-2","TATCGAAAATAAATAG",10,33.07,8.17,-2.6,0.26,1.5,1.11,0.02,">1 nonsynonymous","F12V D97V R136G S164P",4
"lib1","SARS-CoV-2","TATCGAAAGGATCAGG",2,23.61,7.32,-3.44,0.08,1.99,1.07,0,"1 nonsynonymous","C158H",1
"lib1","SARS-CoV-2","TATCGAAATTCAGAGT",2,32.97,8.9,-1.87,0.18,1.82,1.15,0.01,"1 nonsynonymous","V103L",1
"lib1","SARS-CoV-2","TATCGAACGTAATTTC",1,25.45,8.13,-2.63,0.22,2.57,1.07,0.02,">1 nonsynonymous","A18G P54V D98N E141Q Y175M",5
"lib1","SARS-CoV-2","TATCGAACTACGGTTA",1,32.36,10.88,0.12,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCGAAGCAAAGACT",5,6.71,6.3,-4.47,0.59,3,1.35,0.03,">1 nonsynonymous","T3W V71G I80M G152N P191T",5
"lib1","SARS-CoV-2","TATCGAAGCCGATGTT",2,32.99,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","D98V D112W",2
"lib1","SARS-CoV-2","TATCGAAGCCGGTACC",1,59.36,6.17,-4.59,0.92,1.5,1.25,0.03,">1 nonsynonymous","S69L G86R P96R",3
"lib1","SARS-CoV-2","TATCGAATAAATCATA",4,64.01,9.8,-0.97,0.11,2.02,1.06,0,">1 nonsynonymous","F12H L122M P149E",3
"lib1","SARS-CoV-2","TATCGAATTAGTGCGT",15,92.21,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S41P Y50F D59R A67N I80M Y123S",6
"lib1","SARS-CoV-2","TATCGAATTCTATACC",2,11.2,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","F44L P54R T63N A105G G117W E135A F160E",7
"lib1","SARS-CoV-2","TATCGACCAAATTGTG",1,14.14,10.94,0.18,0.08,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TATCGACCCTATACAA",2,20.49,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44C G51R D98S I104H",4
"lib1","SARS-CoV-2","TATCGACGATGAATAC",3,29.32,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","V37N I88M A105P L122P P149M",5
"lib1","SARS-CoV-2","TATCGACTATGTACGA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68W R179A",2
"lib1","SARS-CoV-2","TATCGACTTACCAATA",8,187.33,10.75,-0.01,0.03,2.96,1.02,0,">1 nonsynonymous","V52F L122A",2
"lib1","SARS-CoV-2","TATCGAGATCAAGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9N S41P Y50D F156*",4
"lib1","SARS-CoV-2","TATCGAGGAGACAGGA",5,52.15,8.95,-1.82,0.21,1.5,1.13,0.02,">1 nonsynonymous","D34S Q84L N120R K128L",4
"lib1","SARS-CoV-2","TATCGAGTACACTAAA",8,194.55,10.2,-0.56,0.06,2.68,1.01,0,">1 nonsynonymous","R27G T63V T201D",3
"lib1","SARS-CoV-2","TATCGAGTCATAATGC",12,83.21,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5D N30K G101L Y121P R136M G166I",6
"lib1","SARS-CoV-2","TATCGAGTCCATGGCC",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K K26L A42T W106R I138G E154Q R179M",7
"lib1","SARS-CoV-2","TATCGATAGACACGTA",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S D90I",2
"lib1","SARS-CoV-2","TATCGATCGAACTTTA",6,54.34,7.46,-3.3,0.21,1.5,1.08,0.01,">1 nonsynonymous","N13S G83N N157F",3
"lib1","SARS-CoV-2","TATCGATGGTGAGACA",4,21.5,9.86,-0.91,0.34,1.5,1.01,0.04,">1 nonsynonymous","F8A A105F L122K",3
"lib1","SARS-CoV-2","TATCGCAGCTGCGAAA",1,76.96,10.7,-0.06,0.08,2.87,1.09,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","TATCGCAGGACACCTG",1,34.29,9.67,-1.09,0.15,2.08,1.1,0.01,">1 nonsynonymous","L57Y V115G F160H",3
"lib1","SARS-CoV-2","TATCGCCAGTTGAGGG",2,20.32,10.75,-0.02,0.08,2.96,1.01,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TATCGCCCAGGGGAAC",5,102.8,7.41,-3.35,0.12,1.79,1.1,0,">1 nonsynonymous","K87E Y159V",2
"lib1","SARS-CoV-2","TATCGCCGGCAAAGGC",3,10.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R16L F99N R179F",3
"lib1","SARS-CoV-2","TATCGCCTACTAACAA",1,24.18,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R78K Q84I V103L F167R",4
"lib1","SARS-CoV-2","TATCGCGCTAGACTGT",3,78.87,10.77,0.01,0.07,2.98,1.01,0,">1 nonsynonymous","I28M N40R T63R",3
"lib1","SARS-CoV-2","TATCGCTATTACGCCA",1,1.37,NA,NA,NA,NA,NA,NA,"stop","Y39A Y121* K132W",3
"lib1","SARS-CoV-2","TATCGCTTCTGATTGC",15,114.65,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y21T S69V L95D",3
"lib1","SARS-CoV-2","TATCGCTTGACTGGAT",18,160.49,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12N G83P C158P Y175T",4
"lib1","SARS-CoV-2","TATCGGCAAATAATTG",3,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E C31S V37D S45Q N107C",5
"lib1","SARS-CoV-2","TATCGGCAAATACAAA",6,34.43,9.29,-1.47,0.1,2.62,1.14,0,">1 nonsynonymous","G74R P191T",2
"lib1","SARS-CoV-2","TATCGGCTACTTGCAA",4,68.1,10.4,-0.37,0.05,2.93,1,0,"1 nonsynonymous","F44R",1
"lib1","SARS-CoV-2","TATCGGGAGAAAAAAA",1,432.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R Y91V D97S",3
"lib1","SARS-CoV-2","TATCGGGAGTTGATAA",10,77.14,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F47D C61E Y119M",3
"lib1","SARS-CoV-2","TATCGGGCTAGGCCGG",6,65.73,10.25,-0.52,0.06,2.64,1.02,0,">1 nonsynonymous","L38F Q84N A192T",3
"lib1","SARS-CoV-2","TATCGGTCACAAATCG",6,23.4,6.12,-4.64,1.16,1.5,1.19,0.04,">1 nonsynonymous","K114R P177I R179M",3
"lib1","SARS-CoV-2","TATCGGTCAGTTAATC",1,0.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TATCGGTCGTAACCCA",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100D V182K",2
"lib1","SARS-CoV-2","TATCGTAACTCACCCG",2,57.78,8.37,-2.4,0.16,2.23,1.09,0.01,">1 nonsynonymous","N1D C61L R73E",3
"lib1","SARS-CoV-2","TATCGTAATGAAAATA",5,0.89,NA,NA,NA,NA,NA,NA,"stop","A42F F62H G83V F99*",4
"lib1","SARS-CoV-2","TATCGTATATAAGAAT",6,112.93,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5T R73P L125R F167D A190T",5
"lib1","SARS-CoV-2","TATCGTATGCTTTCGA",1,50.46,9.25,-1.51,0.09,2.61,1.1,0,">1 nonsynonymous","A33M C61R N118C P149L",4
"lib1","SARS-CoV-2","TATCGTATTGAGATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42W T55G V71L K114* V153D",5
"lib1","SARS-CoV-2","TATCGTCCAGAAAGTT",10,245.89,10.13,-0.64,0.05,2.71,1.02,0,">1 nonsynonymous","D34N S53L D98S K114V T201F",5
"lib1","SARS-CoV-2","TATCGTCGAAAATCTT",5,153.5,10.42,-0.35,0.04,2.86,1.03,0,">1 nonsynonymous","D97F N110Q P149T",3
"lib1","SARS-CoV-2","TATCGTCGCCTTTCGG",1,6,10.46,-0.3,0.23,2.69,1.22,0.02,">1 nonsynonymous","T3V F99T Y123W E135R",4
"lib1","SARS-CoV-2","TATCGTTATTAAGACG",3,33.59,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S113D R124E",2
"lib1","SARS-CoV-2","TATCGTTCCAAATGAT",1,15.71,6.19,-4.58,1.22,1.5,1.12,0.03,">1 nonsynonymous","A14K N64V D98T A105K",4
"lib1","SARS-CoV-2","TATCGTTTTTACGTAG",2,18.53,9.84,-0.93,0.17,2.21,1,0.01,">1 nonsynonymous","N58H D98A E141R G152S T201Y",5
"lib1","SARS-CoV-2","TATCTAAAACAAGGTT",1,1.73,NA,NA,NA,NA,NA,NA,"stop","Y93* N157K P177*",3
"lib1","SARS-CoV-2","TATCTAAAATCTATAA",8,57.12,10.66,-0.1,0.07,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCTAAAGGGGTTTT",5,37.54,6.51,-4.26,0.36,1.5,1.1,0.02,">1 nonsynonymous","V11S S36R G86E T100P",4
"lib1","SARS-CoV-2","TATCTAAATATTTGAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V20* D97V",2
"lib1","SARS-CoV-2","TATCTAACCTGCAGGT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","K56* N107I G155C S200Y",4
"lib1","SARS-CoV-2","TATCTAAGTCCTAACG",1,49.99,10.66,-0.1,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCTACAAGTACGAA",1,9.95,10.4,-0.36,0.11,2.94,1,0.01,"1 nonsynonymous","P169Q",1
"lib1","SARS-CoV-2","TATCTACACCACAAAG",1,16.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H I72S",2
"lib1","SARS-CoV-2","TATCTACACCCACAAC",3,16.04,6.1,-4.67,0.66,3,1.09,0.01,">1 nonsynonymous","C6P Y35V W106T N118I E135M",5
"lib1","SARS-CoV-2","TATCTACATAATTGTG",1,39.29,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","N64P V103T Y159N V173A",4
"lib1","SARS-CoV-2","TATCTACATTTGTGGG",1,10.57,6,-4.76,2,3,1.27,0.02,"1 nonsynonymous","G101W",1
"lib1","SARS-CoV-2","TATCTACGATAAACCA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","N4Q G74T T85* Y119A N157E R179K",6
"lib1","SARS-CoV-2","TATCTACTAGACTGAT",4,101.29,10.36,-0.41,0.03,2.88,1.03,0,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","TATCTACTGTTAAACT",6,45.87,6.86,-3.9,0.45,1.5,1.1,0.03,">1 nonsynonymous","V77S A81T D112W",3
"lib1","SARS-CoV-2","TATCTAGAATAAAAAT",3,35.54,6,-4.76,2,3,1.08,0,">1 nonsynonymous","L38T I72G",2
"lib1","SARS-CoV-2","TATCTAGAATGAATAT",5,20.61,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","E10G R127D E135I G152R",4
"lib1","SARS-CoV-2","TATCTAGAGTCTACCA",4,39.69,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C6T I72T G101I D112A",4
"lib1","SARS-CoV-2","TATCTAGCCAACCCAT",9,112.67,10.54,-0.23,0.08,2.88,1.02,0,"1 nonsynonymous","E10P",1
"lib1","SARS-CoV-2","TATCTATAAAGGAGAG",5,38.06,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A105L K114G T140P S164P",4
"lib1","SARS-CoV-2","TATCTATGAGTGAGTG",11,181.93,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12L V32N L60R W106S Y143A",5
"lib1","SARS-CoV-2","TATCTATGCCGCTAAT",3,44.18,10.77,0.01,0.05,2.91,1.05,0,">1 nonsynonymous","I138Q K198R",2
"lib1","SARS-CoV-2","TATCTATTGCGATGTG",5,102.95,8.7,-2.07,0.11,2.63,1.05,0,">1 nonsynonymous","Y39E Y119I N151V",3
"lib1","SARS-CoV-2","TATCTATTTATACCCG",4,168.6,10.07,-0.69,0.07,2.51,1.04,0,">1 nonsynonymous","Y39L N58V Y66L N109L T148N",5
"lib1","SARS-CoV-2","TATCTATTTCGAAAGT",12,99.95,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","T3V R27H V37S A105Y Y119V I142N K199Y",7
"lib1","SARS-CoV-2","TATCTCAAAATGTTTC",10,92.28,9.76,-1.01,0.09,2.07,1.04,0,">1 nonsynonymous","S29V N92S",2
"lib1","SARS-CoV-2","TATCTCAAACTTATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5V V32* K114* G117C",4
"lib1","SARS-CoV-2","TATCTCAAGATTCAGG",3,65.97,6.97,-3.79,0.23,1.69,1.23,0.01,">1 nonsynonymous","E10Q S129R C158R",3
"lib1","SARS-CoV-2","TATCTCAATCGATTGT",5,1.72,NA,NA,NA,NA,NA,NA,"stop","T100S S108*",2
"lib1","SARS-CoV-2","TATCTCAATTCGGTAC",7,159.31,10.65,-0.12,0.03,2.95,1.02,0,">1 nonsynonymous","T100H K114E",2
"lib1","SARS-CoV-2","TATCTCACATACCCAT",10,94.9,10.03,-0.73,0.14,2.37,1.02,0.01,">1 nonsynonymous","L5Y A81I",2
"lib1","SARS-CoV-2","TATCTCACATTCTAAA",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L I104Q Q168I P177Y",4
"lib1","SARS-CoV-2","TATCTCACCATCACGT",3,20.62,10.24,-0.52,0.08,2.85,1.03,0.01,">1 nonsynonymous","F17V Y39V L122H S129T",4
"lib1","SARS-CoV-2","TATCTCAGATATCAAT",8,76.94,9.16,-1.6,0.15,1.68,1.16,0.01,">1 nonsynonymous","R25G L122Y",2
"lib1","SARS-CoV-2","TATCTCATACCCCATA",1,22.56,9.96,-0.8,0.14,2.07,1.07,0.01,"1 nonsynonymous","V20T",1
"lib1","SARS-CoV-2","TATCTCCCAAATCGCC",2,85.78,10.79,0.03,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATCTCCCATACATTT",6,0.77,NA,NA,NA,NA,NA,NA,"stop","R16K D34Y S41*",3
"lib1","SARS-CoV-2","TATCTCGAAATTTCAA",1,12.26,6,-4.76,1.2,1.5,1.06,0.01,">1 nonsynonymous","L5E K94Q G116Q R136N",4
"lib1","SARS-CoV-2","TATCTCGACAGCCAAG",1,58.23,10.74,-0.03,0.06,2.92,1.04,0,">1 nonsynonymous","T3S S43E I138L K199I",4
"lib1","SARS-CoV-2","TATCTCGATCACAGCT",6,8.73,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Q79R G86T T100N V115T R136S",5
"lib1","SARS-CoV-2","TATCTCGATGAAAAGT",10,45.77,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","S45R V181G",2
"lib1","SARS-CoV-2","TATCTCGGCCAACCCA",1,29.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F62R L111F I142S",3
"lib1","SARS-CoV-2","TATCTCTAAAACGGAC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","F8D E76* T100R",3
"lib1","SARS-CoV-2","TATCTCTAGAACATGA",1,9.07,10.01,-0.76,0.24,2.3,1,0.02,"1 nonsynonymous","R179H",1
"lib1","SARS-CoV-2","TATCTCTATGCCCAAG",2,65.03,9.2,-1.57,0.08,1.85,1.1,0,">1 nonsynonymous","W106T N120Y",2
"lib1","SARS-CoV-2","TATCTCTCAAACAGGA",7,103.31,6,-4.76,1.88,1.5,1.18,0.01,">1 nonsynonymous","P96L F160L",2
"lib1","SARS-CoV-2","TATCTCTTATACCAGA",2,38.32,6,-4.76,0.61,1.5,1.11,0.01,">1 nonsynonymous","E10N A81G Y178T L183W",4
"lib1","SARS-CoV-2","TATCTCTTGATACACG",7,187.38,8.84,-1.93,0.11,1.62,1.13,0,">1 nonsynonymous","Y35V Y178K",2
"lib1","SARS-CoV-2","TATCTCTTGCCGAAAA",5,15.91,10.03,-0.73,0.1,1.89,1.08,0,">1 nonsynonymous","V77L D90C D97G",3
"lib1","SARS-CoV-2","TATCTGAAAAAACGGA",9,3.97,NA,NA,NA,NA,NA,NA,"stop","T15I Y123E Y165I Q176*",4
"lib1","SARS-CoV-2","TATCTGAATAGTGTTC",2,119.75,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F17V Y119R I138S Q176S",4
"lib1","SARS-CoV-2","TATCTGAATATAGTAC",1,13.03,10.46,-0.3,0.08,2.94,1,0,"1 nonsynonymous","R136V",1
"lib1","SARS-CoV-2","TATCTGAATCAGTACA",6,45.43,10.42,-0.35,0.05,2.77,1.14,0,">1 nonsynonymous","V32L S45A",2
"lib1","SARS-CoV-2","TATCTGACAGGTGGAT",16,0.19,NA,NA,NA,NA,NA,NA,"stop","I2* N64V N92S D137Q",4
"lib1","SARS-CoV-2","TATCTGACGTCTTATT",6,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V Y123D G155A",3
"lib1","SARS-CoV-2","TATCTGAGCAGGATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F N13I C61I V103K G117Q",5
"lib1","SARS-CoV-2","TATCTGAGGATAAACA",5,122.84,10.69,-0.07,0.05,2.94,1.04,0,">1 nonsynonymous","D97A T148S",2
"lib1","SARS-CoV-2","TATCTGATAAGATAGG",3,45.79,8.47,-2.3,0.13,2.62,1.1,0.01,">1 nonsynonymous","Y119S R136F",2
"lib1","SARS-CoV-2","TATCTGATCAACCAAA",4,34.1,10.68,-0.08,0.07,2.9,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATCTGCAAAAAATCT",2,51.77,8.46,-2.31,0.16,2.62,1.02,0.01,">1 nonsynonymous","S41T G117K A145T",3
"lib1","SARS-CoV-2","TATCTGCACACAAATG",6,77.87,8.44,-2.32,0.21,1.63,1.15,0.01,">1 nonsynonymous","K87F D112M",2
"lib1","SARS-CoV-2","TATCTGCCAACGATCA",1,6.86,6.5,-4.27,0.89,1.5,1.21,0.05,">1 nonsynonymous","F62L G86Y R127E R136M",4
"lib1","SARS-CoV-2","TATCTGCCCACCGACT",8,72.04,6.49,-4.27,0.49,1.5,1.19,0.02,">1 nonsynonymous","Y35D N58E V115Q P133R",4
"lib1","SARS-CoV-2","TATCTGCGTTAATAAA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36K K132Y G166F",3
"lib1","SARS-CoV-2","TATCTGCTAATACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A18F S36* C61L G83F Y119L P149S C158S V180C",8
"lib1","SARS-CoV-2","TATCTGGCACGCATAA",2,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A N92T C158Y",3
"lib1","SARS-CoV-2","TATCTGGTGAGAGTTA",2,86.82,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L60A V77M N107A L122R S139Y F160E P177Q",7
"lib1","SARS-CoV-2","TATCTGTATACTTTGT",3,2711.85,10.2,-0.57,0.03,2.96,1,0,">1 nonsynonymous","L122S F156T",2
"lib1","SARS-CoV-2","TATCTTAACATGGTAA",2,37.19,10.61,-0.15,0.06,2.88,1.03,0,">1 nonsynonymous","V37L F44V",2
"lib1","SARS-CoV-2","TATCTTACAGACGTAC",2,4.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","TATCTTAGGAATGGAT",10,119.35,6.55,-4.22,0.27,1.5,1.16,0.01,">1 nonsynonymous","N64Q Q84K A89R G116S L125V",5
"lib1","SARS-CoV-2","TATCTTAGTGTACTGG",3,29.04,9.28,-1.49,0.11,2.45,1.14,0.01,">1 nonsynonymous","E10N T55F Y143M",3
"lib1","SARS-CoV-2","TATCTTATTGAAGGTA",3,39.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A33L G51W D59A F99R",4
"lib1","SARS-CoV-2","TATCTTCATATTCGTA",1,41.25,8.9,-1.87,0.09,2.47,1.06,0,">1 nonsynonymous","D34P Y119G",2
"lib1","SARS-CoV-2","TATCTTCCAAGTATCT",2,31.79,7.04,-3.73,0.32,1.5,1.12,0.03,">1 nonsynonymous","W23T I142F",2
"lib1","SARS-CoV-2","TATCTTCGCGCAAAAA",2,28.18,6.85,-3.92,0.55,1.5,1.09,0.06,">1 nonsynonymous","I2G K48V T63F I80R A89K F185I",6
"lib1","SARS-CoV-2","TATCTTCTGTAGACAC",3,42.52,10.72,-0.04,0.08,2.91,1.03,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","TATCTTGATTACACTG",4,341.14,10.19,-0.57,0.04,2.8,1,0,">1 nonsynonymous","G9Y N58F",2
"lib1","SARS-CoV-2","TATCTTGCATGCGATC",4,89.86,10.51,-0.26,0.05,2.87,1.06,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","TATCTTGCATTTCGCG",9,128.72,10.74,-0.03,0.06,2.88,1.07,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","TATCTTGGAGTTGTTT",5,17.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y V103F",2
"lib1","SARS-CoV-2","TATCTTGGTTTAAAGG",4,144.82,10.36,-0.41,0.05,2.86,1.06,0,"1 nonsynonymous","A18V",1
"lib1","SARS-CoV-2","TATCTTTAAAATTTAG",6,90.3,9.21,-1.56,0.07,2.71,1.1,0,">1 nonsynonymous","F12V F44D Y119R",3
"lib1","SARS-CoV-2","TATCTTTAGCCTAGCT",7,33.1,6,-4.76,1.55,1.5,1.11,0.01,">1 nonsynonymous","A105V S164V L183P",3
"lib1","SARS-CoV-2","TATCTTTATATGTTAA",10,124.81,8.48,-2.29,0.19,1.61,1.14,0.02,"1 nonsynonymous","G86M",1
"lib1","SARS-CoV-2","TATCTTTATGACTAGC",3,52.36,6.43,-4.33,0.8,1.5,1.3,0.04,">1 nonsynonymous","F99Y P133K",2
"lib1","SARS-CoV-2","TATCTTTATGTTCCTT",1,22.85,10.81,0.04,0.09,2.97,1,0,"1 nonsynonymous","R73K",1
"lib1","SARS-CoV-2","TATCTTTCAGCGGTAA",6,77.65,10.65,-0.12,0.04,2.93,1,0,">1 nonsynonymous","S139T P149W",2
"lib1","SARS-CoV-2","TATCTTTCTACAAGAA",5,11.76,7.63,-3.14,0.28,1.5,1.02,0.02,">1 nonsynonymous","P54C D112V",2
"lib1","SARS-CoV-2","TATCTTTGTTAAAACT",10,1.89,NA,NA,NA,NA,NA,NA,"stop","C6D G51A G83* G101M V182T",5
"lib1","SARS-CoV-2","TATCTTTTTAGCTCAG",10,10.14,NA,NA,NA,NA,NA,NA,"stop","G9* F62V V103E",3
"lib1","SARS-CoV-2","TATCTTTTTCCTGGCC",1,5.87,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","Y91R D98Q V103N S139V K198R",5
"lib1","SARS-CoV-2","TATGAAAAACGGTCCC",9,98.45,7.49,-3.28,0.32,1.5,1.11,0.03,">1 nonsynonymous","D68V G86S G117L",3
"lib1","SARS-CoV-2","TATGAAAAATAGCACA",1,8.35,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V11L N64E A81Y N92A T100L C150V L187Y",7
"lib1","SARS-CoV-2","TATGAAAAATGCCATA",4,161.5,10.76,0,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGAAAACTGACCGT",2,54.27,10.67,-0.1,0.06,2.98,1.02,0,">1 nonsynonymous","N1L V37G",2
"lib1","SARS-CoV-2","TATGAAAAGATATGGT",9,2.28,NA,NA,NA,NA,NA,NA,"stop","S19* A33R S41F Q176M",4
"lib1","SARS-CoV-2","TATGAAAAGTACGATC",13,119.6,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","L38A S45A S53T R73P K128L D137L",6
"lib1","SARS-CoV-2","TATGAAACAAAAACGC",7,47.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","W23G K56M S113Q E135F",4
"lib1","SARS-CoV-2","TATGAAACAAAGTCTT",3,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F N92M",2
"lib1","SARS-CoV-2","TATGAAACATGACGAA",2,52.57,6.98,-3.79,0.27,1.5,1.18,0.01,">1 nonsynonymous","G9E F134C P161G",3
"lib1","SARS-CoV-2","TATGAAACCAGACATG",8,23.21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2T T63L K94V V182G",4
"lib1","SARS-CoV-2","TATGAAACTAATAAAA",4,30.14,10.16,-0.61,0.06,2.93,1.02,0,">1 nonsynonymous","G9K N30P V37H A145V A192G",5
"lib1","SARS-CoV-2","TATGAAAGAACCGCAA",6,27.2,8.68,-2.08,0.21,1.5,1,0.02,">1 nonsynonymous","C6S W106R",2
"lib1","SARS-CoV-2","TATGAAAGACCGGCCC",8,21.31,6.61,-4.15,0.71,1.5,1.14,0.06,">1 nonsynonymous","A18F Y66R C102R Y123S P197L",5
"lib1","SARS-CoV-2","TATGAAAGAGAAGAAG",4,33.12,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S45C P82F",2
"lib1","SARS-CoV-2","TATGAAAGGGGAGTGT",1,35.42,10.68,-0.08,0.08,2.92,1.07,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","TATGAAAGTCCGAGAC",5,19.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C102T Q163E",2
"lib1","SARS-CoV-2","TATGAAATATAGCCGG",2,137.17,9.11,-1.66,0.11,2.63,1.19,0,">1 nonsynonymous","I2W N120T C195V",3
"lib1","SARS-CoV-2","TATGAAATCGTAACCT",2,12.18,8.76,-2,0.28,1.5,1,0.04,">1 nonsynonymous","V37G C49A",2
"lib1","SARS-CoV-2","TATGAAATGCGGCAAT",2,19.73,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","W23R N107Y I138Q K199G",4
"lib1","SARS-CoV-2","TATGAAATGCTAGCCA",1,43.35,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","D34S T55H S69E G86C N130C C158K",6
"lib1","SARS-CoV-2","TATGAAATTAGTGAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F12C F70M Q84R N92* N118F D137S",6
"lib1","SARS-CoV-2","TATGAAATTGGCAGGA",3,16.97,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6E G86R Y123S T148L N157L",5
"lib1","SARS-CoV-2","TATGAACAATATGACT",2,45.68,6.42,-4.34,0.76,1.5,1.22,0.04,">1 nonsynonymous","S129Q R179I",2
"lib1","SARS-CoV-2","TATGAACAGGATTCGC",2,58.22,10.85,0.09,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGAACCAACGAAAC",1,8.9,10.54,-0.23,0.14,2.88,1.07,0.01,"1 nonsynonymous","S45E",1
"lib1","SARS-CoV-2","TATGAACCCACTAGGA",6,37.48,9.98,-0.79,0.1,1.99,1.06,0,">1 nonsynonymous","I88V W106R S200F",3
"lib1","SARS-CoV-2","TATGAACCTAAACAAT",5,59.28,8.71,-2.06,0.12,2.06,1.14,0.01,">1 nonsynonymous","V37L Y121R N130W",3
"lib1","SARS-CoV-2","TATGAACGAGTTTGGT",1,80.98,10.7,-0.07,0.06,2.85,1.07,0,">1 nonsynonymous","G9A P54A C61I",3
"lib1","SARS-CoV-2","TATGAACGGCCATAAG",1,14.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63D E76N I88G S108V N171T",5
"lib1","SARS-CoV-2","TATGAACGTATATCAT",3,89.02,8.79,-1.98,0.1,2.3,1.16,0,">1 nonsynonymous","D97N A145N",2
"lib1","SARS-CoV-2","TATGAAGAGAAAAGAT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T R127M T201R",3
"lib1","SARS-CoV-2","TATGAAGCCCCAAATA",12,192.02,9.88,-0.89,0.05,2.8,1.05,0,">1 nonsynonymous","T46N Y121A P197L",3
"lib1","SARS-CoV-2","TATGAAGCCGATAACT",3,97.41,10.66,-0.1,0.03,2.9,1.03,0,">1 nonsynonymous","N24G I104Y",2
"lib1","SARS-CoV-2","TATGAAGCCTAAAGCC",2,5.78,6.42,-4.34,0.96,3,1.06,0.02,">1 nonsynonymous","L5M A33R L95S P149K",4
"lib1","SARS-CoV-2","TATGAAGCTGCGTTAT",10,7.08,NA,NA,NA,NA,NA,NA,"stop","N92Y Y123*",2
"lib1","SARS-CoV-2","TATGAAGGTAAAAGGT",8,43.17,8.83,-1.93,0.16,1.64,1.14,0.01,">1 nonsynonymous","A89I P149S P169R",3
"lib1","SARS-CoV-2","TATGAAGGTCATTATC",5,5.14,NA,NA,NA,NA,NA,NA,"stop","V32*",1
"lib1","SARS-CoV-2","TATGAAGTTAGTCGTA",2,68.28,10.45,-0.31,0.05,2.88,1.05,0,"1 nonsynonymous","F185I",1
"lib1","SARS-CoV-2","TATGAATATCGATTAT",14,177.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K26E N64D V77D",3
"lib1","SARS-CoV-2","TATGAATATTAGGCCT",9,54.85,6,-4.76,1.17,1.5,1.23,0.03,">1 nonsynonymous","D98H V103D",2
"lib1","SARS-CoV-2","TATGAATCAAAAACCT",1,47.48,9.84,-0.93,0.08,2.94,1,0,">1 nonsynonymous","L5K D98N F126W F160H",4
"lib1","SARS-CoV-2","TATGAATCATCTATCA",1,12.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82Q G101K Q144N G196K",4
"lib1","SARS-CoV-2","TATGAATGTCCACGTA",5,42.72,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","C49R P54K A105D N120V I142R G152F",6
"lib1","SARS-CoV-2","TATGAATTAAAACCAC",1,6.03,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","K56P Y66W D90S F99L W106K P169S",6
"lib1","SARS-CoV-2","TATGAATTCATATCTC",2,45.6,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L5F P177H",2
"lib1","SARS-CoV-2","TATGAATTGTTTACTT",8,171.53,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y119A L131D",2
"lib1","SARS-CoV-2","TATGACAAAATAAACC",1,14.15,10.33,-0.44,0.14,2.97,1.01,0.01,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TATGACAAAATCCTCA",1,5.18,10.28,-0.48,0.1,2.89,1.01,0.01,">1 nonsynonymous","S41E T46C",2
"lib1","SARS-CoV-2","TATGACAAGAGATAAG",8,125.16,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20R K199N",2
"lib1","SARS-CoV-2","TATGACAAGCAAAATT",4,21.09,8.06,-2.7,0.37,1.5,1.1,0.07,">1 nonsynonymous","A22T F44K E135T",3
"lib1","SARS-CoV-2","TATGACAATCTCAATT",3,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110L E141D L183R",3
"lib1","SARS-CoV-2","TATGACACAGGCGATA",6,90.95,10.82,0.05,0.06,2.88,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGACACCTAATTAA",2,55.65,10.31,-0.46,0.04,2.89,1.03,0,">1 nonsynonymous","A33P T170S",2
"lib1","SARS-CoV-2","TATGACACTGAAGCGG",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35G F47W N157H",3
"lib1","SARS-CoV-2","TATGACAGAAAATGCT",2,1.62,NA,NA,NA,NA,NA,NA,"stop","N4V V77G G86* K132L",4
"lib1","SARS-CoV-2","TATGACAGATGTAATC",2,34.59,10.72,-0.05,0.06,2.95,1.03,0,">1 nonsynonymous","T3S N64E",2
"lib1","SARS-CoV-2","TATGACAGCAGAGGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","N92* L95E I142L",3
"lib1","SARS-CoV-2","TATGACAGGTATGCTA",2,19.93,10.78,0.02,0.12,2.93,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATGACAGTATTCGGC",5,10.12,NA,NA,NA,NA,NA,NA,"stop","S53*",1
"lib1","SARS-CoV-2","TATGACATAAAAACGC",1,8.42,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","C6N F44I C61R K114E F167L",5
"lib1","SARS-CoV-2","TATGACATAATACATA",3,23.96,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","L5R W23R F44T G83P G101C",5
"lib1","SARS-CoV-2","TATGACATCAACTGCG",1,15.27,9.46,-1.31,0.14,1.87,1.03,0.01,">1 nonsynonymous","T3R W106C T201S",3
"lib1","SARS-CoV-2","TATGACATCATCTCAA",7,57.56,10.61,-0.15,0.04,2.9,1.03,0,">1 nonsynonymous","S43R R136S",2
"lib1","SARS-CoV-2","TATGACATCGTATAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N64I V173L K199*",3
"lib1","SARS-CoV-2","TATGACATTCATTATT",2,5.83,10.82,0.05,0.03,3,1,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","TATGACCGCCTATATA",3,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S A42L N107Y",3
"lib1","SARS-CoV-2","TATGACCTAAAAAGTA",1,1.51,NA,NA,NA,NA,NA,NA,"stop","L57I T85C W106*",3
"lib1","SARS-CoV-2","TATGACCTACACCAAG",3,54.72,10.37,-0.39,0.05,2.84,1,0,">1 nonsynonymous","A14V T55G",2
"lib1","SARS-CoV-2","TATGACCTAGAAGTAC",2,17.47,8.51,-2.26,0.23,1.85,1.11,0.03,">1 nonsynonymous","L95M N107S P149I",3
"lib1","SARS-CoV-2","TATGACCTTTGTCTCG",5,60.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37Q G86N G101F",3
"lib1","SARS-CoV-2","TATGACGAATAAGTAG",3,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N13F R27K G51Y V103A Y119S Q176R",7
"lib1","SARS-CoV-2","TATGACGCACACATTT",7,53.52,10.68,-0.09,0.04,2.96,1.03,0,">1 nonsynonymous","L5G T201M",2
"lib1","SARS-CoV-2","TATGACGTCAACTAAT",1,37.82,10.01,-0.75,0.09,2.1,1.03,0,">1 nonsynonymous","N40E G51L K128P K199W",4
"lib1","SARS-CoV-2","TATGACTAGAATTAGT",1,9.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10T D90V P96L Y175V",4
"lib1","SARS-CoV-2","TATGACTAGCAATGTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F V32A K48Y G86R Y143N",5
"lib1","SARS-CoV-2","TATGACTCACTCAGCA",1,1.27,NA,NA,NA,NA,NA,NA,"stop","D59* D112* K198*",3
"lib1","SARS-CoV-2","TATGACTCATGCTCCG",3,26.25,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","T15L Y35I G101A Y159L Y175E",5
"lib1","SARS-CoV-2","TATGACTCCCCGCCGG",1,17.33,8.61,-2.16,0.13,2.86,1.1,0.01,">1 nonsynonymous","S43K T63A D112E G174R",4
"lib1","SARS-CoV-2","TATGACTTAAGGACAT",2,23.56,8.53,-2.23,0.34,1.5,1.07,0.06,">1 nonsynonymous","A81G F99I",2
"lib1","SARS-CoV-2","TATGACTTACAAATAC",4,30.83,9.65,-1.11,0.08,2.84,1.01,0,"1 nonsynonymous","N118F",1
"lib1","SARS-CoV-2","TATGACTTGATAAACC",4,41.15,6.24,-4.52,0.61,1.5,1.14,0.02,">1 nonsynonymous","V11S N64D V77T A81S N107W T201S",6
"lib1","SARS-CoV-2","TATGACTTTTATTCTA",4,4.5,NA,NA,NA,NA,NA,NA,"stop","D90M D98S P133*",3
"lib1","SARS-CoV-2","TATGAGAAAAAATAGA",3,22.44,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","A67R A105L",2
"lib1","SARS-CoV-2","TATGAGAAAAGCGATT",5,30.52,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A33Q V65F I88F R136S",4
"lib1","SARS-CoV-2","TATGAGAAACAGTGAT",7,60.03,9.76,-1,0.11,2.05,1.03,0,">1 nonsynonymous","T3S Q84F G152F",3
"lib1","SARS-CoV-2","TATGAGAAACTCGATT",3,59.63,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","Y35V Y50C K132C",3
"lib1","SARS-CoV-2","TATGAGAAAGACAATA",2,34.41,9.84,-0.93,0.15,2.19,1.07,0.01,">1 nonsynonymous","A42K N58S S139W",3
"lib1","SARS-CoV-2","TATGAGAAATTCTGGA",5,56.76,9.87,-0.9,0.13,2.4,1.12,0.01,">1 nonsynonymous","A42Y P96R",2
"lib1","SARS-CoV-2","TATGAGAATACTACAC",3,0,NA,NA,NA,NA,NA,NA,"stop","T46I E76* G117R S139P F156L",5
"lib1","SARS-CoV-2","TATGAGAGTCTGCCCA",12,220.73,10.73,-0.04,0.04,2.95,1.02,0,">1 nonsynonymous","G9E E76D",2
"lib1","SARS-CoV-2","TATGAGCACCAACATC",1,30.67,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S19V N58R A145Y",3
"lib1","SARS-CoV-2","TATGAGCACTAAATAT",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90C A105P",2
"lib1","SARS-CoV-2","TATGAGCGCTATAGCA",8,0.5,NA,NA,NA,NA,NA,NA,"stop","V20M K56* G86I",3
"lib1","SARS-CoV-2","TATGAGCTAATTATAT",1,23.99,10.81,0.04,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGAGCTACCGTATT",5,30.61,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R127I Y165E",2
"lib1","SARS-CoV-2","TATGAGCTGGCGACTT",2,5.72,6.58,-4.18,1.89,1.5,1.14,0.03,">1 nonsynonymous","S29A C49P Y143R F156A E186T",5
"lib1","SARS-CoV-2","TATGAGCTTATAAACA",12,43.73,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L5Q L38V K56L D90H C150Q F156S P169A",7
"lib1","SARS-CoV-2","TATGAGGAAACACAAA",2,9.44,6,-4.76,1.18,1.5,1.04,0.01,">1 nonsynonymous","S29R D98T I104A T148S Q168I G174I T201C",7
"lib1","SARS-CoV-2","TATGAGGAACAAGTCA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y V103A S108N",3
"lib1","SARS-CoV-2","TATGAGGACAACGAAC",6,31.49,6,-4.76,1.62,1.5,1.23,0.02,">1 nonsynonymous","V11T V77W T85K N157M P169G",5
"lib1","SARS-CoV-2","TATGAGGCCTAAAGCC",5,24.25,10.76,-0.01,0.08,2.86,1.02,0,">1 nonsynonymous","R27T F185L",2
"lib1","SARS-CoV-2","TATGAGGCGACGTCAC",5,3,NA,NA,NA,NA,NA,NA,"stop","G9* E141I S200Y",3
"lib1","SARS-CoV-2","TATGAGGCGGAAAAAA",2,60.79,9.71,-1.06,0.08,2.01,1.09,0,">1 nonsynonymous","F44I A105M",2
"lib1","SARS-CoV-2","TATGAGGCGGATGGAC",7,233.12,10.72,-0.04,0.06,2.88,1.07,0,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","TATGAGGGTAAAAGTT",1,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R V37G L95V P177K A192S",5
"lib1","SARS-CoV-2","TATGAGGTACAATTCT",5,1.96,NA,NA,NA,NA,NA,NA,"stop","S19R S41N I104Y N110W S200*",5
"lib1","SARS-CoV-2","TATGAGGTTAGCTGAA",7,12.56,8.68,-2.08,0.12,1.56,1.15,0,">1 nonsynonymous","F17S A67F T148R",3
"lib1","SARS-CoV-2","TATGAGTAATTAACGT",5,17.43,8.56,-2.2,0.14,2.01,1.14,0.01,">1 nonsynonymous","A33F Y66A N107I T201I",4
"lib1","SARS-CoV-2","TATGAGTACCGACACG",1,1.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TATGAGTAGTGTGTGC",1,15.13,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58F F99D I104F",3
"lib1","SARS-CoV-2","TATGAGTCGAGGCACA",5,42.44,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T3A V37C N118L G152T G155S",5
"lib1","SARS-CoV-2","TATGAGTGAAACCCGC",3,29.83,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I2P I88Q R124V",3
"lib1","SARS-CoV-2","TATGAGTGGTGTCATT",11,297.26,10.54,-0.22,0.03,2.87,1.04,0,"1 nonsynonymous","E10T",1
"lib1","SARS-CoV-2","TATGAGTTGTAACATC",4,0.37,NA,NA,NA,NA,NA,NA,"stop","T3A N13F L60K R124*",4
"lib1","SARS-CoV-2","TATGATAAACCCAGGG",1,32.37,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","V11I K26W A89H L122T Q176P",5
"lib1","SARS-CoV-2","TATGATAAACTAGAAC",2,10.24,9.79,-0.98,0.19,2.19,1,0.01,">1 nonsynonymous","S19T A42L",2
"lib1","SARS-CoV-2","TATGATAAATAGTTAA",1,6.79,6,-4.76,1.16,1.5,1.04,0.02,">1 nonsynonymous","G9V K56L P82H C150S Q163Y",5
"lib1","SARS-CoV-2","TATGATAACCGCCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","G51* E154L",2
"lib1","SARS-CoV-2","TATGATAAGGCCATAC",2,114.29,10.62,-0.14,0.04,2.94,1.01,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","TATGATACCGATCAAC",3,72.77,10.78,0.02,0.08,2.83,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TATGATAGTGGCAAAC",2,21.3,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C49F I80R K87V G116R T170L",5
"lib1","SARS-CoV-2","TATGATATAAGGTACC",3,15.63,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15Y S43M N58V V77M",4
"lib1","SARS-CoV-2","TATGATATCTCCTTGG",9,0.86,NA,NA,NA,NA,NA,NA,"stop","C31G S41C L122K S129P G155K V173* K198W",7
"lib1","SARS-CoV-2","TATGATATTTATAATT",5,79.28,10.68,-0.08,0.06,2.95,1.01,0,"1 nonsynonymous","E10T",1
"lib1","SARS-CoV-2","TATGATCAAGCGAGAA",4,452.61,9.7,-1.07,0.06,2.6,1.02,0,">1 nonsynonymous","F44C E154M",2
"lib1","SARS-CoV-2","TATGATCACAGCTTTT",5,36.47,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","D59K S113L K128F",3
"lib1","SARS-CoV-2","TATGATCATCGCATAT",4,226.64,10.71,-0.06,0.07,2.87,1.04,0,"1 nonsynonymous","N130Q",1
"lib1","SARS-CoV-2","TATGATCATTCTCAGC",1,18.66,9.01,-1.75,0.26,1.56,1.2,0.03,">1 nonsynonymous","N13M V37G G83E",3
"lib1","SARS-CoV-2","TATGATCCCGTTGGAA",4,25.76,6.85,-3.92,0.55,1.5,1.21,0.04,">1 nonsynonymous","R27S F99A N130V",3
"lib1","SARS-CoV-2","TATGATCGATGATTCA",5,11.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C31H P54Y R179M P191R K198M",5
"lib1","SARS-CoV-2","TATGATCGTGGTATGC",5,72.33,8.37,-2.4,0.09,2.92,1.08,0,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","TATGATCTAAATGTAT",5,89.04,10.77,0,0.06,2.88,1.05,0,"1 nonsynonymous","V52I",1
"lib1","SARS-CoV-2","TATGATCTTCCTAATG",1,22.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31E T100Y N107D",3
"lib1","SARS-CoV-2","TATGATGACCTAAGTG",5,56.83,6.79,-3.97,0.33,1.5,1.08,0.02,">1 nonsynonymous","K132V Q176I",2
"lib1","SARS-CoV-2","TATGATGATTTCTTAT",7,83.04,10.11,-0.65,0.09,2.21,1,0,">1 nonsynonymous","V52N G83F",2
"lib1","SARS-CoV-2","TATGATGCAAAATCAT",1,12.8,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","K56T R124C C158D",3
"lib1","SARS-CoV-2","TATGATGCTATTAATA",7,28.16,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","I104E P149T",2
"lib1","SARS-CoV-2","TATGATGGGTACCTCT",3,0.44,NA,NA,NA,NA,NA,NA,"stop","T55G K94L Y119S C158L Y175*",5
"lib1","SARS-CoV-2","TATGATGGTTTTAATA",4,6.27,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","N1D A42V Y121F F126L P149T V182N S200F",7
"lib1","SARS-CoV-2","TATGATGTTGTTAAAG",4,24.47,10.61,-0.16,0.06,2.79,1.07,0,">1 nonsynonymous","A33M V153N",2
"lib1","SARS-CoV-2","TATGATTGATGCTATT",6,11.44,10.16,-0.6,0.16,2.09,1.12,0.01,">1 nonsynonymous","T3M D34F",2
"lib1","SARS-CoV-2","TATGATTGTGAAAGAG",1,32.53,10.64,-0.13,0.09,2.94,1.02,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","TATGATTTCCGTCCAG",4,21.35,10.89,0.13,0.1,2.98,1.03,0,">1 nonsynonymous","A42Q G83D",2
"lib1","SARS-CoV-2","TATGATTTTCCCCACT",4,79.79,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P54L S139R E154P Y165P P177V",5
"lib1","SARS-CoV-2","TATGCAACCCACATGC",1,15.53,9.29,-1.48,0.17,1.88,1.09,0.02,">1 nonsynonymous","F12K E141N",2
"lib1","SARS-CoV-2","TATGCAACCTTCACCG",5,27.9,10.33,-0.43,0.06,2.97,1.02,0,">1 nonsynonymous","T55S I142A S147N",3
"lib1","SARS-CoV-2","TATGCAAGAAGTAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14Q C31* N92M V103C L122I",5
"lib1","SARS-CoV-2","TATGCAAGATCATCAT",3,32.49,9.77,-1,0.26,1.5,1.07,0.02,">1 nonsynonymous","W106G F160S T201Y",3
"lib1","SARS-CoV-2","TATGCAATAAACATAC",3,37.73,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","T85S I142F F167P",3
"lib1","SARS-CoV-2","TATGCAATACAAGTCG",11,30.93,6.74,-4.02,0.36,1.5,1.11,0.02,">1 nonsynonymous","L5Q Y93S Q144T",3
"lib1","SARS-CoV-2","TATGCAATGATTGGCC",3,6.72,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","R27L",1
"lib1","SARS-CoV-2","TATGCAATTGCAAATC",5,2.76,NA,NA,NA,NA,NA,NA,"stop","F12V V71* W106V G172Q",4
"lib1","SARS-CoV-2","TATGCACAAATAACAA",5,29.35,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","R25K T63G V182F",3
"lib1","SARS-CoV-2","TATGCACAAATTTTAA",5,40.18,8.26,-2.51,0.14,2.24,1.07,0.01,">1 nonsynonymous","S139H Y159V",2
"lib1","SARS-CoV-2","TATGCACAGAATTTTA",2,26.05,6.93,-3.84,0.44,1.5,1.13,0.05,">1 nonsynonymous","D90C T140Y P149L Q168V",4
"lib1","SARS-CoV-2","TATGCACAGGACAAAC",4,19.45,9.53,-1.23,0.3,1.5,1,0.06,">1 nonsynonymous","N13E Y39L I104S L183I S200E",5
"lib1","SARS-CoV-2","TATGCACATTAGCAAC",3,35.3,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A81V R127T I138L Y165R",4
"lib1","SARS-CoV-2","TATGCACCATTCTACT",4,21.88,6.64,-4.12,0.84,1.5,1.2,0.07,">1 nonsynonymous","F70P F134L",2
"lib1","SARS-CoV-2","TATGCACCGACTGAGA",5,100.86,10.76,-0.01,0.05,2.92,1.04,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","TATGCACCTACATTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","I72R Y91* C150Y",3
"lib1","SARS-CoV-2","TATGCACGCTAAATGT",8,42.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D90P F99L",2
"lib1","SARS-CoV-2","TATGCACTCAATGGAT",2,58.12,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C31L I72P K94N Y119I T201L",5
"lib1","SARS-CoV-2","TATGCACTGCCAGTAT",7,62.84,6.17,-4.59,0.44,1.5,1.08,0.01,">1 nonsynonymous","N4V C102Q F167G",3
"lib1","SARS-CoV-2","TATGCACTTTCAATAC",5,70.4,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61E I88V W106S R136T F167N",5
"lib1","SARS-CoV-2","TATGCAGAGGCGATCT",4,27.07,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F17H V52R A67H Y93L G116S",5
"lib1","SARS-CoV-2","TATGCAGCGCTATTCT",1,49.23,10.69,-0.08,0.06,2.92,1.06,0,"1 nonsynonymous","N120H",1
"lib1","SARS-CoV-2","TATGCAGTCACTTATA",6,47.8,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F47M N107I R124A S164T",4
"lib1","SARS-CoV-2","TATGCAGTCTAACGCC",1,8,6.27,-4.49,1.68,1.5,1.05,0.01,">1 nonsynonymous","C49H Y66P",2
"lib1","SARS-CoV-2","TATGCAGTTCGGTATC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","K114W T148* Q168S",3
"lib1","SARS-CoV-2","TATGCATAAGAAAACC",2,6.45,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F47R D97Y C102R S113L F134S",5
"lib1","SARS-CoV-2","TATGCATATACGGGTT",6,108.65,10.65,-0.12,0.09,2.8,1.02,0,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","TATGCATGCATAAACA",1,8.48,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A22T S29Y G74V N151S P197W",5
"lib1","SARS-CoV-2","TATGCATTAAACTCAA",1,35.46,9.84,-0.92,0.03,2.91,1.03,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","TATGCATTCCCGCCTA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","N1* C6K D98L N107Y",4
"lib1","SARS-CoV-2","TATGCCAAAGGAGTCC",2,39.17,10.07,-0.69,0.08,2.47,1.05,0,">1 nonsynonymous","F8L V37C T55S D90Y",4
"lib1","SARS-CoV-2","TATGCCAACAATGACA",1,46.71,10.25,-0.52,0.05,2.89,1.02,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","TATGCCAACATTGATA",1,14.68,6,-4.76,2,1.5,1.41,0.07,">1 nonsynonymous","D34A Q84K W106G N120R T140N N151T",6
"lib1","SARS-CoV-2","TATGCCACAAAATATG",10,111.89,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","P96H R124A V153S",3
"lib1","SARS-CoV-2","TATGCCACAACGCGGA",4,22.05,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N58T A89E Y143I",3
"lib1","SARS-CoV-2","TATGCCACACTAATAT",4,76.7,10.72,-0.05,0.07,2.87,1.09,0,"1 nonsynonymous","I2A",1
"lib1","SARS-CoV-2","TATGCCACATTTGCAC",10,82.17,9.1,-1.67,0.13,1.81,1.14,0.01,"1 nonsynonymous","D137Q",1
"lib1","SARS-CoV-2","TATGCCACCAGAGTTC",1,7.33,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","L95P T140G",2
"lib1","SARS-CoV-2","TATGCCAGTACAGTAG",7,196.5,10.72,-0.04,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGCCCACCCTTAAA",5,22.31,6,-4.76,2,1.51,1.11,0.01,">1 nonsynonymous","G9V A42R G86H G101V I138L",5
"lib1","SARS-CoV-2","TATGCCCAGATATACC",10,126.83,10.65,-0.11,0.05,2.9,1.05,0,">1 nonsynonymous","D90N A190C",2
"lib1","SARS-CoV-2","TATGCCCCCTACGAGA",6,32.02,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","A81G C150F A192Q",3
"lib1","SARS-CoV-2","TATGCCCCGACATTAA",3,29.29,6.38,-4.38,0.32,1.5,1.08,0.01,">1 nonsynonymous","A22M A89S N107V L131S Q168F Y175K",6
"lib1","SARS-CoV-2","TATGCCCCTTTAATAA",8,117.4,10.74,-0.02,0.05,2.9,1.04,0,"1 nonsynonymous","N4M",1
"lib1","SARS-CoV-2","TATGCCCGGAGCTGAG",3,0.58,NA,NA,NA,NA,NA,NA,"stop","P96Q Y143*",2
"lib1","SARS-CoV-2","TATGCCGACTCTGAGA",5,48.21,10.43,-0.33,0.03,2.98,1,0,"1 nonsynonymous","K87I",1
"lib1","SARS-CoV-2","TATGCCGGGGAAAAAA",1,73.88,10.57,-0.2,0.05,2.87,1.05,0,"1 nonsynonymous","F8I",1
"lib1","SARS-CoV-2","TATGCCGGTAGTCGCA",8,181.35,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V37F D90S P133V G172M",4
"lib1","SARS-CoV-2","TATGCCTAATTAATGC",6,84.37,10.1,-0.66,0.05,2.97,1,0,">1 nonsynonymous","L60V G174E",2
"lib1","SARS-CoV-2","TATGCCTACTTGCGAA",2,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100Y R127G Q144R",3
"lib1","SARS-CoV-2","TATGCCTCAAGACGGC",4,42.76,9.84,-0.92,0.13,2.16,1.03,0.01,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","TATGCCTCTAATAATG",7,93.88,9.31,-1.45,0.15,1.59,1.16,0.01,">1 nonsynonymous","W23V Y39M",2
"lib1","SARS-CoV-2","TATGCGAAACCTACAA",4,24.41,8.55,-2.21,0.22,2.14,1.06,0.02,">1 nonsynonymous","A81V I138L Y143I",3
"lib1","SARS-CoV-2","TATGCGAATGCCGTTA",3,16.82,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","Y50S N107V S184Q",3
"lib1","SARS-CoV-2","TATGCGAGAATAGGAC",5,1.54,NA,NA,NA,NA,NA,NA,"stop","D68G D97* G116R V182E",4
"lib1","SARS-CoV-2","TATGCGCTTACTAAAG",5,23.77,9,-1.77,0.27,1.5,1.04,0.03,"1 nonsynonymous","S19V",1
"lib1","SARS-CoV-2","TATGCGGGTACACAAA",5,40.79,10.52,-0.24,0.07,2.81,1.07,0,">1 nonsynonymous","N40S D90L",2
"lib1","SARS-CoV-2","TATGCGTAACAGAAAG",5,81.65,10.24,-0.52,0.07,2.92,1,0,">1 nonsynonymous","G155V K199V",2
"lib1","SARS-CoV-2","TATGCGTACCACCCTT",6,9.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5R N13H P54H V103F L125V L188V",6
"lib1","SARS-CoV-2","TATGCGTGGTGCGATC",2,37.93,9.99,-0.77,0.1,2.69,1.06,0,">1 nonsynonymous","C6V K132S T201I",3
"lib1","SARS-CoV-2","TATGCGTTCAAAATAC",3,41.11,10.08,-0.68,0.11,2.6,1.02,0,">1 nonsynonymous","A105Y V173N",2
"lib1","SARS-CoV-2","TATGCGTTCGGTATAG",1,55.63,10.33,-0.43,0.05,2.87,1,0,"1 nonsynonymous","P161A",1
"lib1","SARS-CoV-2","TATGCTAAACAACGAT",3,26.32,8.75,-2.01,0.22,1.5,1.19,0.03,"1 nonsynonymous","V103C",1
"lib1","SARS-CoV-2","TATGCTAAAGGACTAG",13,87.7,9.95,-0.81,0.12,2.11,1.04,0.01,">1 nonsynonymous","F99V N130V",2
"lib1","SARS-CoV-2","TATGCTAACACGGGTC",1,20.55,7.1,-3.67,0.36,1.5,1.12,0.04,">1 nonsynonymous","I104V N157V",2
"lib1","SARS-CoV-2","TATGCTACAACCGTAA",2,3.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43L",1
"lib1","SARS-CoV-2","TATGCTAGTGCAAGCA",1,16.87,10.66,-0.1,0.05,2.86,1.09,0,">1 nonsynonymous","R16T Y35T",2
"lib1","SARS-CoV-2","TATGCTCAGACATTAC",5,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S Q79E K128G",3
"lib1","SARS-CoV-2","TATGCTCATGCCGTAA",5,169.38,6.44,-4.33,0.54,1.5,1.26,0.03,">1 nonsynonymous","V32S D68C Y91H K128G",4
"lib1","SARS-CoV-2","TATGCTCTGTCCATCT",1,10.81,6.33,-4.43,1.1,1.5,1.26,0.06,">1 nonsynonymous","G9A A14K V103M",3
"lib1","SARS-CoV-2","TATGCTGACCAAAATA",5,83.93,9.22,-1.54,0.07,2.71,1.1,0,">1 nonsynonymous","F8L F62Y G117L",3
"lib1","SARS-CoV-2","TATGCTGTATAAAAAG",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V V11N E76S Y119A",4
"lib1","SARS-CoV-2","TATGCTTAACACTGAA",18,93.01,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","G51L W106E L122M P133I",4
"lib1","SARS-CoV-2","TATGCTTCGTTCCGAA",9,0.02,NA,NA,NA,NA,NA,NA,"stop","T46H S69L Y143* Q163N",4
"lib1","SARS-CoV-2","TATGGAAACGGGCTTG",7,30.4,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","D34V F99I T148V T201Q",4
"lib1","SARS-CoV-2","TATGGAAATACATTGC",5,169,9.41,-1.36,0.05,2.77,1.08,0,">1 nonsynonymous","N4L N118T",2
"lib1","SARS-CoV-2","TATGGAAATATCGACC",5,58.38,6,-4.76,2,3,1.12,0,">1 nonsynonymous","C6L S19P Y91R",3
"lib1","SARS-CoV-2","TATGGAACAATATTGG",1,30.14,8.22,-2.55,0.27,1.5,1.22,0.03,">1 nonsynonymous","N118V S139Y",2
"lib1","SARS-CoV-2","TATGGAACTAAGAAAG",2,9.23,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4T T55G C61N P82E D112Q",5
"lib1","SARS-CoV-2","TATGGAAGCTTTATTG",1,62.12,8.52,-2.24,0.13,2.26,1.11,0.01,">1 nonsynonymous","F8V K87T G116R Y121H V153I",5
"lib1","SARS-CoV-2","TATGGAATAAGCCACT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","P96I Y119I Y143* G152S",4
"lib1","SARS-CoV-2","TATGGAATACGGTGTG",10,83.6,10.78,0.01,0.07,2.84,1.09,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","TATGGACAATGCCACA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","D90R Y178*",2
"lib1","SARS-CoV-2","TATGGACAGACGACGG",2,1.88,NA,NA,NA,NA,NA,NA,"stop","D34G D97S V103* Q144L P177I",5
"lib1","SARS-CoV-2","TATGGACCAAGCAACG",3,55.58,10.8,0.03,0.07,2.95,1.03,0,"1 nonsynonymous","T3D",1
"lib1","SARS-CoV-2","TATGGACCTCCGTTCC",2,36.22,8.91,-1.85,0.09,2.76,1.07,0,">1 nonsynonymous","I88V A145L",2
"lib1","SARS-CoV-2","TATGGACGATAACATG",5,20.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T85L N118V E141H P149M",4
"lib1","SARS-CoV-2","TATGGACGATAAGTAG",3,11.58,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V11M A33D L95H V173K",4
"lib1","SARS-CoV-2","TATGGACGTAGACACC",3,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S G74S V103P",3
"lib1","SARS-CoV-2","TATGGACGTAGATAGT",5,39.4,10.84,0.08,0.09,2.99,1.02,0,"1 nonsynonymous","R16Y",1
"lib1","SARS-CoV-2","TATGGACTACAGATAT",3,72.01,10.71,-0.06,0.05,2.82,1.06,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","TATGGAGAGATCATAT",12,201.65,10.61,-0.16,0.05,2.9,1.04,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","TATGGAGTGGATTAAC",2,22.85,10.78,0.01,0.06,3,1,0,">1 nonsynonymous","S129Q V173A",2
"lib1","SARS-CoV-2","TATGGAGTTGTGAGTT",9,67.56,6,-4.76,2,3,1.2,0,">1 nonsynonymous","A89R R179Y",2
"lib1","SARS-CoV-2","TATGGATAACAATATA",7,131.38,9.78,-0.99,0.09,2.3,1.08,0,">1 nonsynonymous","D34N S43N L60V Y178S",4
"lib1","SARS-CoV-2","TATGGATAAGGTAACG",1,15.78,10.25,-0.51,0.07,2.65,1.02,0,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","TATGGATAAGGTTTAG",9,113.39,8.36,-2.4,0.18,1.54,1.15,0.01,">1 nonsynonymous","L57S V115L E141K G174T",4
"lib1","SARS-CoV-2","TATGGATGACGATTTG",1,6.66,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","Y35T Y50V T63K K128T S139V T148Y G172R",7
"lib1","SARS-CoV-2","TATGGATGCTCGACGA",3,42.45,10.58,-0.18,0.06,2.9,1.07,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","TATGGATTTTAATCCA",4,54.78,8.97,-1.8,0.18,1.5,1.09,0.01,">1 nonsynonymous","P82L K128P",2
"lib1","SARS-CoV-2","TATGGCACAGCCATGG",6,1.06,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib1","SARS-CoV-2","TATGGCACTGCCCATG",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126G P149V",2
"lib1","SARS-CoV-2","TATGGCATTAACAGCG",3,0.99,NA,NA,NA,NA,NA,NA,"stop","D97Y F160*",2
"lib1","SARS-CoV-2","TATGGCATTTAAAACA",4,67.05,10.71,-0.05,0.11,2.92,1.02,0,"1 nonsynonymous","P197H",1
"lib1","SARS-CoV-2","TATGGCCGGCTATAGT",2,21.84,8.19,-2.57,0.23,2.25,1.15,0.02,">1 nonsynonymous","A81V G166Y",2
"lib1","SARS-CoV-2","TATGGCCGTAACGCCA",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108L L131V",2
"lib1","SARS-CoV-2","TATGGCCGTGCTAATC",3,39.41,10.73,-0.04,0.05,2.91,1.04,0,">1 nonsynonymous","N1V K56N",2
"lib1","SARS-CoV-2","TATGGCCTATAACAAT",4,167.53,9.86,-0.9,0.05,2.63,1.07,0,">1 nonsynonymous","N107R S113A",2
"lib1","SARS-CoV-2","TATGGCGAGCCCTACT",11,142.91,10.74,-0.02,0.09,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGGCGTAATTCAAA",2,44.8,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","N4Y R127K P133A C158P",4
"lib1","SARS-CoV-2","TATGGCTAATTTACTT",2,16.96,6,-4.76,2,1.5,1.07,0,"1 nonsynonymous","Y178P",1
"lib1","SARS-CoV-2","TATGGCTAATTTGTCC",2,1.74,NA,NA,NA,NA,NA,NA,"stop","P82* N110G",2
"lib1","SARS-CoV-2","TATGGCTATATTTTAT",11,154.23,10.16,-0.6,0.06,2.66,1.02,0,"1 nonsynonymous","A18L",1
"lib1","SARS-CoV-2","TATGGCTTCCCAGGAT",3,32.85,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V103F D112C",2
"lib1","SARS-CoV-2","TATGGGAACAAATCTA",9,64.27,6.39,-4.37,0.53,1.5,1.12,0.02,">1 nonsynonymous","Y21K N118M",2
"lib1","SARS-CoV-2","TATGGGAACCGTTTTG",3,50.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5V G117A Y143G",3
"lib1","SARS-CoV-2","TATGGGACATTTCTCA",3,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35H P54W S113P E141S P197S",5
"lib1","SARS-CoV-2","TATGGGATGTCATTGC",3,42.48,10.18,-0.58,0.1,2.61,1,0,">1 nonsynonymous","N4G K132S T140P",3
"lib1","SARS-CoV-2","TATGGGCAGTTGGTGG",6,70.2,10.63,-0.13,0.1,2.81,1.08,0,"1 nonsynonymous","K56G",1
"lib1","SARS-CoV-2","TATGGGCATATGCCAA",10,108.07,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","P7L F17P F44E G51N Y175A S200Y",6
"lib1","SARS-CoV-2","TATGGGCCCAAGAAAG",1,61.66,10.62,-0.15,0.05,2.93,1.02,0,">1 nonsynonymous","E10S C61T",2
"lib1","SARS-CoV-2","TATGGGCGAAAGCTTA",2,46.36,6,-4.76,2,3,1.14,0,"1 nonsynonymous","L162P",1
"lib1","SARS-CoV-2","TATGGGCGAGGCTAGT",2,5.69,9.45,-1.31,0.28,1.85,1.14,0.01,">1 nonsynonymous","A14G F44D N64V S147F",4
"lib1","SARS-CoV-2","TATGGGGATTCGAGGT",1,17.94,8.52,-2.24,0.15,2.61,1.02,0.01,">1 nonsynonymous","I2R T46N N118H G166A",4
"lib1","SARS-CoV-2","TATGGGGATTGATAAC",7,284.09,8.27,-2.5,0.13,2.59,1.07,0.01,">1 nonsynonymous","V11I T55E T148H Y175L",4
"lib1","SARS-CoV-2","TATGGTACAGTACTGT",2,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30E V71E A81P G146W S164I T201G",6
"lib1","SARS-CoV-2","TATGGTAGCATAATCC",1,41.35,10.31,-0.46,0.02,2.98,1,0,">1 nonsynonymous","V37T K87Q",2
"lib1","SARS-CoV-2","TATGGTAGCTTAGGCT",4,66.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L60C T140S C150S",3
"lib1","SARS-CoV-2","TATGGTAGGATCTGTA",4,18.35,7,-3.76,0.56,1.5,1.21,0.06,">1 nonsynonymous","I2N D90N T100I Q144W P149R R179L",6
"lib1","SARS-CoV-2","TATGGTAGTAGGATCC",13,149.53,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","G9T F99V N107R G146L",4
"lib1","SARS-CoV-2","TATGGTATCCGTGCTC",1,38.41,10.6,-0.16,0.09,2.89,1.08,0,">1 nonsynonymous","S41Q S129Y",2
"lib1","SARS-CoV-2","TATGGTCAAAATCTAC",1,17.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y L95P A192T",3
"lib1","SARS-CoV-2","TATGGTCATAGAGAAA",5,33.86,7.93,-2.84,0.32,1.5,1,0.04,">1 nonsynonymous","C102L P161S",2
"lib1","SARS-CoV-2","TATGGTCATCGTACCC",1,2.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","TATGGTCGAAACTTAT",3,34.51,10.11,-0.65,0.07,2.78,1.05,0,">1 nonsynonymous","K94A G155T",2
"lib1","SARS-CoV-2","TATGGTCGTTTATGTC",3,14.18,8.3,-2.47,0.34,1.5,1.11,0.05,">1 nonsynonymous","F17Q D34T",2
"lib1","SARS-CoV-2","TATGGTCTAAATACTT",4,26.43,9.79,-0.97,0.12,2.33,1.05,0,">1 nonsynonymous","C6R T140E",2
"lib1","SARS-CoV-2","TATGGTCTAGCGATGA",5,49.36,10.78,0.02,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGGTCTCTGACGCG",4,19.62,6,-4.76,1.38,3,1.11,0,">1 nonsynonymous","N4K R127V Q168G S200M",4
"lib1","SARS-CoV-2","TATGGTCTGTTGCTTC",2,12.86,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6A S19R G101M P161I T201L",5
"lib1","SARS-CoV-2","TATGGTGCAACAGTTA",2,11.17,6,-4.76,1.26,3,1.06,0,">1 nonsynonymous","G9C T15S A89S K128D D137I",5
"lib1","SARS-CoV-2","TATGGTTAAATAAACC",5,19.08,8.8,-1.96,0.18,2.1,1.13,0.02,">1 nonsynonymous","R16M K56Y N107E",3
"lib1","SARS-CoV-2","TATGGTTACCACAACA",7,126.34,10.03,-0.73,0.08,2.57,1.04,0,">1 nonsynonymous","N40M D98C",2
"lib1","SARS-CoV-2","TATGGTTTCTAAGTTA",1,15.93,10.38,-0.38,0.06,2.92,1,0,">1 nonsynonymous","T85W T100L S129G P149S",4
"lib1","SARS-CoV-2","TATGGTTTGATCAATA",2,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y K94I",2
"lib1","SARS-CoV-2","TATGGTTTGGACATAG",1,1.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46S",1
"lib1","SARS-CoV-2","TATGTAAAAACGCAGA",4,16.64,6.75,-4.01,0.69,1.5,1.16,0.07,">1 nonsynonymous","S53T Y66A Y91R S113F Y143P",5
"lib1","SARS-CoV-2","TATGTAAACACCCAAT",4,9.1,6,-4.76,2,1.5,1.08,0.04,">1 nonsynonymous","S19Y D90L",2
"lib1","SARS-CoV-2","TATGTAAACGACCACC",3,1.7,NA,NA,NA,NA,NA,NA,"stop","T15* N58F K87G K114M",4
"lib1","SARS-CoV-2","TATGTAAACGCTGGAC",2,11.13,6.31,-4.46,2,3,1.18,0.02,">1 nonsynonymous","S113W T140P Q163Y",3
"lib1","SARS-CoV-2","TATGTAAACTCTAGTA",5,110.24,10.76,0,0.06,2.91,1.05,0,"1 nonsynonymous","E186D",1
"lib1","SARS-CoV-2","TATGTAACAAAGGACA",2,128.87,10.34,-0.43,0.02,2.92,1.02,0,">1 nonsynonymous","F62G P149Q T201N",3
"lib1","SARS-CoV-2","TATGTAAGAATTGACT",6,61.05,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I72G K128S T201S",3
"lib1","SARS-CoV-2","TATGTAAGCGAAATCA",1,9.35,NA,NA,NA,NA,NA,NA,"stop","N1S F44P K56L F62C T85V G101Q Q163G T201*",8
"lib1","SARS-CoV-2","TATGTACAAACTGGAA",3,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D C150F N171I",3
"lib1","SARS-CoV-2","TATGTACAAGAAGGTC",3,0.36,NA,NA,NA,NA,NA,NA,"stop","N13C Y39M T85G Q163*",4
"lib1","SARS-CoV-2","TATGTACCACGGATAG",6,37.97,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","S43G G86Y D112M",3
"lib1","SARS-CoV-2","TATGTACCATATATTC",2,24.98,7.69,-3.08,0.23,1.5,1.22,0.02,">1 nonsynonymous","P7K L38R P149W",3
"lib1","SARS-CoV-2","TATGTACCGTATGTCC",4,7.98,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","A81V R127T I138L Y165R",4
"lib1","SARS-CoV-2","TATGTACGAGCTACGA",2,23.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42E K56L Y93T K128S F167S",5
"lib1","SARS-CoV-2","TATGTACGCAGAAAGA",12,6.55,NA,NA,NA,NA,NA,NA,"stop","Y35G F70* F134Y",3
"lib1","SARS-CoV-2","TATGTACGGGGTTCTA",1,39.54,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","A14F T46I I88F G117P Y159P",5
"lib1","SARS-CoV-2","TATGTACGTTCACATT",2,16.83,6.15,-4.62,0.77,1.5,1.1,0.02,">1 nonsynonymous","W23A W106P D137R",3
"lib1","SARS-CoV-2","TATGTACTAATAACGG",3,15.54,10.85,0.08,0.09,2.88,1.03,0,">1 nonsynonymous","R16T D97F",2
"lib1","SARS-CoV-2","TATGTAGGTATAGTAT",4,35.72,9.04,-1.73,0.32,1.5,1,0.05,">1 nonsynonymous","A42Q L60G V103M",3
"lib1","SARS-CoV-2","TATGTATAAGAACACA",1,4.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A18H",1
"lib1","SARS-CoV-2","TATGTATAATAAATTC",4,11.67,10.41,-0.35,0.1,2.92,1,0,"1 nonsynonymous","N118Q",1
"lib1","SARS-CoV-2","TATGTATAGGAATACT",6,40.53,6.42,-4.34,0.51,1.5,1.11,0.02,">1 nonsynonymous","C61F L95A",2
"lib1","SARS-CoV-2","TATGTATCAAGGTAAG",2,66.56,8.48,-2.29,0.11,2.52,1.07,0,">1 nonsynonymous","N58Y K87I Y121L G146W",4
"lib1","SARS-CoV-2","TATGTATCCCGTGCAA",3,15.23,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","T55I W106L G146I N151L",4
"lib1","SARS-CoV-2","TATGTATCGTCACTAG",5,137.86,10.27,-0.5,0.05,2.92,1.03,0,">1 nonsynonymous","P149K G174R",2
"lib1","SARS-CoV-2","TATGTATCTGAGTTAA",8,86.9,6,-4.76,1.07,1.5,1.2,0.01,">1 nonsynonymous","L60V Y91M S139M Q168L",4
"lib1","SARS-CoV-2","TATGTATTCGCAAAGT",2,20.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V S113V K128V",3
"lib1","SARS-CoV-2","TATGTATTCTCCAAAA",4,39.71,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G9N V103S N118Y",3
"lib1","SARS-CoV-2","TATGTATTGACCATAA",1,48.16,10.73,-0.03,0.07,2.85,1.09,0,">1 nonsynonymous","K56H F160R",2
"lib1","SARS-CoV-2","TATGTATTTTGCTTAA",5,136.01,10.69,-0.08,0.07,2.9,1.09,0,">1 nonsynonymous","Y39W S147A",2
"lib1","SARS-CoV-2","TATGTCAAACAATATA",5,230.46,10.32,-0.44,0.03,2.89,1.02,0,"1 nonsynonymous","G83T",1
"lib1","SARS-CoV-2","TATGTCAACCACAAAA",12,83.17,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C102S R136D V173E",3
"lib1","SARS-CoV-2","TATGTCAGGTAATCAT",7,124.35,10.72,-0.05,0.07,2.82,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TATGTCCATGGCTGCT",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N1R S41* I80R S147P",4
"lib1","SARS-CoV-2","TATGTCCCACGAGATT",3,38.28,6,-4.76,2,3,1.19,0,">1 nonsynonymous","D98E R124S",2
"lib1","SARS-CoV-2","TATGTCCCCACGGTGG",3,17.65,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","C61N K87Y V103Q R124G",4
"lib1","SARS-CoV-2","TATGTCGAGGTCCGTA",6,49.87,6,-4.76,1.26,1.5,1.27,0.02,">1 nonsynonymous","T3Y T63P V65R",3
"lib1","SARS-CoV-2","TATGTCGGACAAATAT",7,101.19,9.74,-1.02,0.08,1.92,1.08,0,">1 nonsynonymous","E10F D90T",2
"lib1","SARS-CoV-2","TATGTCGGACATAATT",5,48.08,10.68,-0.09,0.07,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TATGTCGTGAATCCTT",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S T63R P96C N151F",4
"lib1","SARS-CoV-2","TATGTCGTTCTTGAGG",4,11.34,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","W23S K48W A81M",3
"lib1","SARS-CoV-2","TATGTCTAACATCTCA",2,6.4,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","L60M Y91M V103P",3
"lib1","SARS-CoV-2","TATGTCTTATCGCTTA",3,44.04,10.07,-0.7,0.1,2.52,1.03,0,">1 nonsynonymous","D34W T100L T201N",3
"lib1","SARS-CoV-2","TATGTCTTGATAGATC",3,21.86,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A81D Y119T N151C Q176T",4
"lib1","SARS-CoV-2","TATGTCTTTCCTACGC",6,38.35,9.74,-1.02,0.15,2.44,1.06,0.01,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","TATGTGAATGATAGCC",6,45.41,10.23,-0.54,0.08,2.99,1,0,">1 nonsynonymous","S41P C61S",2
"lib1","SARS-CoV-2","TATGTGACAAAAGAAA",2,37.78,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","Y35S F44K P96L F99T",4
"lib1","SARS-CoV-2","TATGTGATATCGAGTT",2,16.09,10.16,-0.6,0.11,2.7,1,0,">1 nonsynonymous","D98H N107S",2
"lib1","SARS-CoV-2","TATGTGCCCTATACGG",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N P149L",2
"lib1","SARS-CoV-2","TATGTGCGAACAAATA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","T15G A81K D98* T170L R179S",5
"lib1","SARS-CoV-2","TATGTGCTAATCAAGC",10,136.94,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G86F N107Q",2
"lib1","SARS-CoV-2","TATGTGCTGTGAGCAA",4,25.47,10.38,-0.39,0.04,2.94,1.03,0,">1 nonsynonymous","P7L S147I",2
"lib1","SARS-CoV-2","TATGTGCTTAAGAAAT",2,68.36,10.78,0.01,0.08,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TATGTGGTTAACACGA",3,8.28,8.69,-2.07,0.29,1.79,1.17,0.03,"1 nonsynonymous","Q79I",1
"lib1","SARS-CoV-2","TATGTGTCCAAAAGAT",5,6.35,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","C31G D98L T140D G172I",4
"lib1","SARS-CoV-2","TATGTGTCTAACCCGG",4,1.4,NA,NA,NA,NA,NA,NA,"stop","A81V N120*",2
"lib1","SARS-CoV-2","TATGTGTGACGCCCTG",10,51.51,6,-4.76,1.17,2.25,1.16,0.01,">1 nonsynonymous","T15A S41A S69H A105V I142V",5
"lib1","SARS-CoV-2","TATGTGTTTCCATAAA",9,146.95,10.03,-0.73,0.07,2.23,1.05,0,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","TATGTTAAACAAGAGA",4,18.51,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34F S129I F134L T170M",4
"lib1","SARS-CoV-2","TATGTTAAACCAAAAT",2,21.88,6.01,-4.76,1.06,1.5,1.15,0.03,">1 nonsynonymous","F44S L131W P149I",3
"lib1","SARS-CoV-2","TATGTTAATAGCCGCA",1,0.95,NA,NA,NA,NA,NA,NA,"stop","D68V K87*",2
"lib1","SARS-CoV-2","TATGTTAATCATATTT",2,18.56,9.33,-1.43,0.16,1.5,1.01,0.03,"1 nonsynonymous","D68F",1
"lib1","SARS-CoV-2","TATGTTACAGATGCGT",1,56.82,10.44,-0.33,0.06,2.85,1.04,0,"1 nonsynonymous","V65F",1
"lib1","SARS-CoV-2","TATGTTACTGGTAATA",9,58.37,6.53,-4.23,0.33,1.5,1.13,0.01,">1 nonsynonymous","D68L L95P G166N",3
"lib1","SARS-CoV-2","TATGTTATATCGACCA",3,74.76,6.65,-4.11,0.33,2.03,1.17,0.01,">1 nonsynonymous","N4S C150N",2
"lib1","SARS-CoV-2","TATGTTATTGATATTC",1,58.3,8.74,-2.02,0.18,2.03,1.09,0.01,">1 nonsynonymous","F160L P177S",2
"lib1","SARS-CoV-2","TATGTTATTGTGGCTT",4,66.47,9.96,-0.81,0.1,1.99,1.11,0,">1 nonsynonymous","C61D W106L I138V",3
"lib1","SARS-CoV-2","TATGTTCAAATAAGAA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","F8L A18* C102S",3
"lib1","SARS-CoV-2","TATGTTCAGGCATTCC",2,35.69,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","P96V E141V C150Y",3
"lib1","SARS-CoV-2","TATGTTCATATTAAGA",3,20.51,6,-4.76,2,1.5,1.35,0.05,">1 nonsynonymous","F134L S184P",2
"lib1","SARS-CoV-2","TATGTTCCAAACTGCT",3,29.2,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N64S N157I F185S",3
"lib1","SARS-CoV-2","TATGTTCCTACATTGA",2,95.1,10.7,-0.06,0.06,2.9,1.06,0,"1 nonsynonymous","T201M",1
"lib1","SARS-CoV-2","TATGTTCTGAAACTCG",7,0.34,NA,NA,NA,NA,NA,NA,"stop","N4L Y91* C150T",3
"lib1","SARS-CoV-2","TATGTTGAACTTCATC",21,393.13,10.9,0.13,0.05,2.89,1.05,0,">1 nonsynonymous","S36D Q163Y",2
"lib1","SARS-CoV-2","TATGTTGCAAAAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","Q84* D97I",2
"lib1","SARS-CoV-2","TATGTTGGAAGTAGAA",3,7.62,9.57,-1.2,0.04,2.03,1.02,0,">1 nonsynonymous","D90F D98L",2
"lib1","SARS-CoV-2","TATGTTGGTACATACC",5,91.24,10.78,0.02,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATGTTTAAACAGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* V103R I142L",3
"lib1","SARS-CoV-2","TATGTTTAATGGACAG",5,81.54,9.71,-1.06,0.09,2.13,1.05,0,">1 nonsynonymous","C31V L95M",2
"lib1","SARS-CoV-2","TATGTTTATGATTTTA",1,17.56,8.7,-2.06,0.05,2.82,1.07,0,">1 nonsynonymous","G83V Y119F P149H",3
"lib1","SARS-CoV-2","TATGTTTTCTGTGGTA",8,84.07,9.56,-1.2,0.06,2.84,1.07,0,">1 nonsynonymous","T55I I142T G174L",3
"lib1","SARS-CoV-2","TATTAAAAACGATCCG",3,22.21,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","K94P K132M Q168P",3
"lib1","SARS-CoV-2","TATTAAAAAGAGAATT",2,137.18,9.64,-1.13,0.06,2.83,1.07,0,">1 nonsynonymous","S113T T148K",2
"lib1","SARS-CoV-2","TATTAAAAATCTTAGT",5,3.33,NA,NA,NA,NA,NA,NA,"stop","I2* R73K N107A",3
"lib1","SARS-CoV-2","TATTAAAACACGAACC",15,5.09,NA,NA,NA,NA,NA,NA,"stop","P7* K198N",2
"lib1","SARS-CoV-2","TATTAAAAGAAAAAAC",16,219.33,7.51,-3.25,0.15,1.75,1.16,0.01,">1 nonsynonymous","Y39S C158Q",2
"lib1","SARS-CoV-2","TATTAAAAGATAGTGG",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K Y35A",2
"lib1","SARS-CoV-2","TATTAAAATATACCGC",1,16.2,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","V32Q I88S G116D S147R A190R",5
"lib1","SARS-CoV-2","TATTAAAATTGAACGG",2,8.94,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L38C Y66G I88E D137T P149F",5
"lib1","SARS-CoV-2","TATTAAACACATGACC",6,27.48,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","C61K I72S D98Y L162T",4
"lib1","SARS-CoV-2","TATTAAACGACTCGAG",5,27.57,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T3P C49D R73L G86E Y119E",5
"lib1","SARS-CoV-2","TATTAAACTCACAGTA",2,3.21,NA,NA,NA,NA,NA,NA,"stop","Y21L Y35L R179*",3
"lib1","SARS-CoV-2","TATTAAAGAACTGTAG",8,153.5,6.26,-4.51,0.45,1.5,1.14,0.01,">1 nonsynonymous","I28S K87A Y91S",3
"lib1","SARS-CoV-2","TATTAAAGAAGATTGG",4,46.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E F44A L57E V71E E154V",5
"lib1","SARS-CoV-2","TATTAAAGACTATAAA",2,66.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N24R N64D F99H P133N N157I Y178S",6
"lib1","SARS-CoV-2","TATTAAAGAGGACGAT",3,64.79,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y66G P177F",2
"lib1","SARS-CoV-2","TATTAAAGGGCTTGGT",1,23.03,6.23,-4.53,0.72,1.5,1.13,0.04,">1 nonsynonymous","V115Q P149H G174I R179M",4
"lib1","SARS-CoV-2","TATTAAATAAACAAAA",3,56.71,10.35,-0.41,0.05,2.92,1.02,0,">1 nonsynonymous","T15Y D98N",2
"lib1","SARS-CoV-2","TATTAAATAAAGATCA",4,43.55,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9C D98C P177S",3
"lib1","SARS-CoV-2","TATTAAATCTCAATAA",2,97.41,10.27,-0.49,0.05,2.79,1,0,">1 nonsynonymous","V37S S139Y",2
"lib1","SARS-CoV-2","TATTAAATTAAGCCAT",3,63,10.25,-0.52,0.08,2.64,1.02,0,"1 nonsynonymous","G83I",1
"lib1","SARS-CoV-2","TATTAACAATAATGTA",1,70.9,10.35,-0.42,0.1,2.74,1.02,0,"1 nonsynonymous","F99Y",1
"lib1","SARS-CoV-2","TATTAACAATTCAAAC",6,76.14,9.55,-1.21,0.13,1.93,1.08,0.01,">1 nonsynonymous","K87Y P96L",2
"lib1","SARS-CoV-2","TATTAACAGAAAATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E R78S F126N",3
"lib1","SARS-CoV-2","TATTAACATGGTTCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K R27V P54Y S139M Y143I Q163I",6
"lib1","SARS-CoV-2","TATTAACATTCCAACC",6,44.13,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","F8R Y66L F99Y I104N T140G N151Q F156V",7
"lib1","SARS-CoV-2","TATTAACCGACACTGA",1,11.28,10.81,0.04,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTAACCTAATAGGC",6,2369.75,8.38,-2.39,0.09,1.56,1.09,0,"1 nonsynonymous","N92D",1
"lib1","SARS-CoV-2","TATTAACGCGACGAAT",1,51.8,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I88T F99L G152T",3
"lib1","SARS-CoV-2","TATTAACGGCAGATTT",7,44.33,6.23,-4.54,0.97,1.5,1.11,0.04,">1 nonsynonymous","L60S V103S L188T",3
"lib1","SARS-CoV-2","TATTAACTAATACATT",1,7.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V Y123M P149S P161L",4
"lib1","SARS-CoV-2","TATTAACTACATAAAG",12,62.39,10.65,-0.11,0.09,2.82,1.07,0,">1 nonsynonymous","T3R T55I",2
"lib1","SARS-CoV-2","TATTAACTATACACGC",4,22.37,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L57M G101D",2
"lib1","SARS-CoV-2","TATTAACTCAGATACA",5,69.49,9.99,-0.77,0.07,2.7,1.04,0,"1 nonsynonymous","F99M",1
"lib1","SARS-CoV-2","TATTAACTCTGACAAC",6,86.95,10.44,-0.33,0.05,2.89,1.01,0,">1 nonsynonymous","L5V S41T N58D S129V V153C",5
"lib1","SARS-CoV-2","TATTAACTTGACATAC",2,0.33,NA,NA,NA,NA,NA,NA,"stop","D112V P149* T201Y",3
"lib1","SARS-CoV-2","TATTAAGAAGATAACA",4,1.68,NA,NA,NA,NA,NA,NA,"stop","P7I L95R Q144*",3
"lib1","SARS-CoV-2","TATTAAGAGTTCTCGA",1,19.69,7.73,-3.04,0.27,1.5,1.1,0.03,">1 nonsynonymous","T140G Y165N",2
"lib1","SARS-CoV-2","TATTAAGATACACCCA",3,73.03,10.72,-0.05,0.04,2.96,1,0,"1 nonsynonymous","S129M",1
"lib1","SARS-CoV-2","TATTAAGCATCCCCAG",9,180.2,10.65,-0.11,0.03,2.89,1.05,0,"1 nonsynonymous","P191F",1
"lib1","SARS-CoV-2","TATTAAGCGACATGCT",1,8.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V Y119R R127V",3
"lib1","SARS-CoV-2","TATTAAGCGGAACTAA",2,79.13,10.83,0.07,0.05,2.94,1.02,0,">1 nonsynonymous","T100R S129N",2
"lib1","SARS-CoV-2","TATTAAGCTTATCGAT",3,23.24,6,-4.76,2,1.5,1.42,0.08,">1 nonsynonymous","W23P S36G N58S D90F",4
"lib1","SARS-CoV-2","TATTAAGGAGCCATAT",6,121.07,10.74,-0.02,0.04,2.91,1.04,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","TATTAAGGTTAGCGAA",3,73.21,9.76,-1,0.12,1.81,1.09,0.01,"1 nonsynonymous","K94L",1
"lib1","SARS-CoV-2","TATTAAGTTAATTGGT",4,38.72,6,-4.76,1.65,1.5,1.15,0.03,">1 nonsynonymous","T55V G86F V182Y",3
"lib1","SARS-CoV-2","TATTAAGTTATTAGAC",5,83.52,10.44,-0.33,0.06,2.85,1.04,0,">1 nonsynonymous","T3S T15I",2
"lib1","SARS-CoV-2","TATTAAGTTCAGCCGA",1,11.09,6,-4.76,0.54,1.5,1.07,0,">1 nonsynonymous","C6K I88T N151L",3
"lib1","SARS-CoV-2","TATTAATAAACAATCG",1,22.46,10.64,-0.12,0.1,2.78,1.19,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","TATTAATAAACACCCT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","P7L V77Q K114* I142F Y175T S184R",6
"lib1","SARS-CoV-2","TATTAATAAGAGATCA",10,110.62,10.81,0.05,0.05,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTAATAATTTACAC",3,12.25,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","A89M N107R G146W",3
"lib1","SARS-CoV-2","TATTAATAATTTAGAC",5,2.62,NA,NA,NA,NA,NA,NA,"stop","I2* F160L K198N",3
"lib1","SARS-CoV-2","TATTAATAATTTCTTA",4,81.07,6.95,-3.82,0.41,1.5,1.27,0.03,">1 nonsynonymous","A105T D137N",2
"lib1","SARS-CoV-2","TATTAATAGTAACACA",6,51.13,9.05,-1.72,0.23,1.62,1.2,0.02,">1 nonsynonymous","N58M S139I P169T",3
"lib1","SARS-CoV-2","TATTAATGACCACATA",14,138.01,9.15,-1.61,0.22,1.5,1.14,0.02,">1 nonsynonymous","Y39W P82S",2
"lib1","SARS-CoV-2","TATTAATGACGATGCT",3,23.99,7.03,-3.73,0.68,1.5,1.06,0.07,">1 nonsynonymous","G51V C61A K94G P149W F160N Q168T Q176R",7
"lib1","SARS-CoV-2","TATTAATGTATAGTGT",4,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TATTAATGTCAAATCG",3,7.11,6,-4.76,2,1.5,1.33,0.07,">1 nonsynonymous","F17C Y91C Y119K T170H",4
"lib1","SARS-CoV-2","TATTAATTATAAAATT",10,117.6,8.26,-2.5,0.19,1.61,1.15,0.01,">1 nonsynonymous","K132S F167L",2
"lib1","SARS-CoV-2","TATTAATTATAAGTAG",8,146.94,9.67,-1.09,0.06,2.75,1.09,0,">1 nonsynonymous","G74S K199D",2
"lib1","SARS-CoV-2","TATTAATTCAAGAAGA",1,18.01,9.34,-1.42,0.22,1.5,1,0.02,">1 nonsynonymous","V65T W106R",2
"lib1","SARS-CoV-2","TATTAATTCGAGATAC",19,1.94,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","TATTAATTCTAAAGAT",2,26.66,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F12I K87D K114G G146T T170Y",5
"lib1","SARS-CoV-2","TATTAATTTAACAGTA",3,115.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35N K48H P177S",3
"lib1","SARS-CoV-2","TATTAATTTTAACATA",3,23.13,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","V181N",1
"lib1","SARS-CoV-2","TATTAATTTTATGACA",3,29.65,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R25C P54R C61S V103G",4
"lib1","SARS-CoV-2","TATTACAAAAGTCCGT",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T Y121C F167T",3
"lib1","SARS-CoV-2","TATTACAAACGTGGAT",6,2.76,NA,NA,NA,NA,NA,NA,"stop","R27M S41* W106F G155S",4
"lib1","SARS-CoV-2","TATTACAAATTAGAAC",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K K87N N120R S129L",4
"lib1","SARS-CoV-2","TATTACAAGATAATGA",10,56.38,10.83,0.07,0.1,2.94,1.03,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","TATTACACAAGGCATA",4,20.25,10.65,-0.11,0.04,2.89,1.09,0,">1 nonsynonymous","A33V T63K",2
"lib1","SARS-CoV-2","TATTACACATTATTAT",1,41.94,8.11,-2.66,0.32,1.5,1.04,0.04,">1 nonsynonymous","L38M C61S Q84F K87D D97H F160N",6
"lib1","SARS-CoV-2","TATTACACTAATGAAT",4,2.67,NA,NA,NA,NA,NA,NA,"stop","R73L E135K I142*",3
"lib1","SARS-CoV-2","TATTACACTGCAAGCC",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A D59L D112H F185K T201L",5
"lib1","SARS-CoV-2","TATTACACTTTACCCG",5,204.16,7.95,-2.82,0.15,1.99,1.12,0.01,">1 nonsynonymous","I138S I142R F156S",3
"lib1","SARS-CoV-2","TATTACAGAAATAAGT",5,0,NA,NA,NA,NA,NA,NA,"stop","N13L I80* G86I S129N C158V",5
"lib1","SARS-CoV-2","TATTACAGGATCCGAG",4,1.93,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib1","SARS-CoV-2","TATTACAGTTGGTCAC",1,44.06,10.2,-0.57,0.05,2.97,1,0,"1 nonsynonymous","N118D",1
"lib1","SARS-CoV-2","TATTACATACAAGCGC",3,9.48,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P96R Y119S G174Y",3
"lib1","SARS-CoV-2","TATTACATATTCTTGG",4,35.79,7.33,-3.43,0.4,1.65,1.15,0.03,">1 nonsynonymous","Y119C S139C P149L",3
"lib1","SARS-CoV-2","TATTACATGCGAACAT",7,46.71,10.36,-0.4,0.04,2.96,1,0,"1 nonsynonymous","L125A",1
"lib1","SARS-CoV-2","TATTACATTACTCACC",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E V182Y",2
"lib1","SARS-CoV-2","TATTACATTTTGCCTG",3,15.5,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","C61L E135L N157Y F160L V173L",5
"lib1","SARS-CoV-2","TATTACCAAAGAGAAA",1,24.46,9.95,-0.81,0.13,2.41,1,0.01,">1 nonsynonymous","G9T A33H D97C",3
"lib1","SARS-CoV-2","TATTACCACATCTACA",4,16.99,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R16T C31S A42L I104S Y121V L188S",6
"lib1","SARS-CoV-2","TATTACCAGTCGAACG",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47D K94Q G117K",3
"lib1","SARS-CoV-2","TATTACCTACATTTAG",1,43.47,10.72,-0.04,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTACCTACCTATAG",1,10.58,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G51A I104K N110Y F160S",4
"lib1","SARS-CoV-2","TATTACCTGGAAATAA",1,10.09,7.12,-3.64,0.33,1.5,1.05,0.02,">1 nonsynonymous","V71M E76G V103Y N110L V153R T170S",6
"lib1","SARS-CoV-2","TATTACGAAGATGGGG",2,1.02,NA,NA,NA,NA,NA,NA,"stop","S41P T55P C61A V180*",4
"lib1","SARS-CoV-2","TATTACGAGCATAAAG",2,70.77,10.33,-0.43,0.05,2.92,1.01,0,"1 nonsynonymous","C6D",1
"lib1","SARS-CoV-2","TATTACGCATACCGTG",3,39.88,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L95N L122T T140G P169L H189F",5
"lib1","SARS-CoV-2","TATTACGCGCTCCTTC",1,0.63,NA,NA,NA,NA,NA,NA,"stop","L57* I88L",2
"lib1","SARS-CoV-2","TATTACGGTTATAGAA",4,32.94,6,-4.76,1.11,1.57,1.13,0.01,">1 nonsynonymous","Y35S F99C Y123L E154I F167T Y175I",6
"lib1","SARS-CoV-2","TATTACGTGAATAGGT",5,1.2,NA,NA,NA,NA,NA,NA,"stop","K87S L131*",2
"lib1","SARS-CoV-2","TATTACTAAAACCTTG",7,24.7,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","K26M K87L V103T V181C",4
"lib1","SARS-CoV-2","TATTACTAAACGGAGC",2,51.52,9.87,-0.9,0.09,2.65,1.06,0,">1 nonsynonymous","C6N T140F",2
"lib1","SARS-CoV-2","TATTACTAAACTTATG",1,16.16,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","G101S L162A",2
"lib1","SARS-CoV-2","TATTACTAAATAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9W D34A C61G P96* R136D P149R",6
"lib1","SARS-CoV-2","TATTACTACTCCCGCT",9,41.66,10.77,0,0.12,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTACTATGATCAAA",6,0.91,NA,NA,NA,NA,NA,NA,"stop","F156* E186L",2
"lib1","SARS-CoV-2","TATTACTCACCTGAGT",5,96.23,6,-4.76,2,2.25,1.07,0,">1 nonsynonymous","N1D Y35H V77Y G86H L122T E154Y",6
"lib1","SARS-CoV-2","TATTACTCCAAGGAAT",4,33.57,10.62,-0.14,0.1,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTACTCTAGTTGTT",2,8.2,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F70K R78F P96R W106L F156M",5
"lib1","SARS-CoV-2","TATTACTTTCACCGGT",2,0.53,NA,NA,NA,NA,NA,NA,"stop","R16* Y35P F44V F99L N118S",5
"lib1","SARS-CoV-2","TATTAGAAAAGTGCGT",3,16.77,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N58T A89E Y143I",3
"lib1","SARS-CoV-2","TATTAGAACAGGTGGC",8,20.9,7.2,-3.56,0.33,1.5,1.14,0.02,">1 nonsynonymous","S41G F99S L162I",3
"lib1","SARS-CoV-2","TATTAGAACCAACATA",1,28.88,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P96M N120M P177Q",3
"lib1","SARS-CoV-2","TATTAGACACCTAAAT",1,1.26,NA,NA,NA,NA,NA,NA,"stop","T3G K56V V77H I88* K198L",5
"lib1","SARS-CoV-2","TATTAGACGAGACCAG",6,72.71,10.5,-0.26,0.06,2.86,1.1,0,"1 nonsynonymous","K56C",1
"lib1","SARS-CoV-2","TATTAGACGATGGGAG",11,105.01,10.43,-0.33,0.06,2.84,1.02,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","TATTAGACGTACACGC",2,38.09,10.73,-0.03,0.1,2.87,1.06,0.01,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","TATTAGAGCAAACACA",1,11.05,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C61W V103N S184L",3
"lib1","SARS-CoV-2","TATTAGAGCACGGCCA",5,63.89,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R73V V77G Q84S S147T",4
"lib1","SARS-CoV-2","TATTAGATGAAATTGC",8,145.7,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36L Q84T L131K F167T",4
"lib1","SARS-CoV-2","TATTAGATTTACTCTA",1,0.61,NA,NA,NA,NA,NA,NA,"stop","L5K Y119* P177D S184W",4
"lib1","SARS-CoV-2","TATTAGCAAATTCTCT",3,17.36,10.78,0.01,0.09,2.93,1,0.01,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","TATTAGCACGAGCTAT",4,7.13,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6G N92V R127M",3
"lib1","SARS-CoV-2","TATTAGCACTGGATGC",4,16.9,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","C102R F126G",2
"lib1","SARS-CoV-2","TATTAGCATGATAGTC",1,88.18,10.52,-0.25,0.08,2.85,1.01,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","TATTAGCCATAAAACC",2,0.09,NA,NA,NA,NA,NA,NA,"stop","T15Q R27* T148N",3
"lib1","SARS-CoV-2","TATTAGCTGAGACTAA",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I N64D A105L F156S Q176P",5
"lib1","SARS-CoV-2","TATTAGGAAAATGTAA",7,118.95,10.73,-0.03,0.04,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTAGGAAAGAAACG",2,25.26,10.64,-0.13,0.09,2.93,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTAGGAATGAGGTA",10,135.45,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A89N R127P",2
"lib1","SARS-CoV-2","TATTAGGACAAAATTA",1,34.82,6,-4.76,0.94,1.5,1.23,0.01,">1 nonsynonymous","R25L V115S S147F",3
"lib1","SARS-CoV-2","TATTAGGAGACGACCT",1,27.4,9.94,-0.82,0.13,2.84,1,0.01,">1 nonsynonymous","L111P L122E K128E",3
"lib1","SARS-CoV-2","TATTAGGCAACGATAC",2,6.3,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","N92I N151K G155Y",3
"lib1","SARS-CoV-2","TATTAGGCCTAAAGTA",3,91.3,10.73,-0.03,0.06,2.97,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TATTAGGTGGACAAAT",3,151.27,8.26,-2.5,0.2,1.96,1.13,0.01,">1 nonsynonymous","T15Y T63D G117D",3
"lib1","SARS-CoV-2","TATTAGTAACAACACG",9,171.56,10.76,-0.01,0.06,2.91,1.05,0,">1 nonsynonymous","N4D T201H",2
"lib1","SARS-CoV-2","TATTAGTAGGATTGAA",1,42.27,8.77,-2,0.11,2.84,1.13,0,">1 nonsynonymous","R16S C61I G166L",3
"lib1","SARS-CoV-2","TATTAGTCCATATCTT",6,0.11,NA,NA,NA,NA,NA,NA,"stop","T3H S41G V71K A105S L125A P133R G146* H189F",8
"lib1","SARS-CoV-2","TATTAGTCCTGAAGCA",4,45.48,6.06,-4.7,1.17,1.5,1.18,0.04,">1 nonsynonymous","I28P P82T Y121R",3
"lib1","SARS-CoV-2","TATTAGTTTGACGTAG",9,121,10.74,-0.02,0.07,2.89,1.05,0,"1 nonsynonymous","L5W",1
"lib1","SARS-CoV-2","TATTATAAAATAGTAT",6,0.53,NA,NA,NA,NA,NA,NA,"stop","S19W G51* D97V T148K",4
"lib1","SARS-CoV-2","TATTATAAAGCGTATA",2,51.28,9.88,-0.88,0.09,2.42,1.04,0,">1 nonsynonymous","E10D A81I",2
"lib1","SARS-CoV-2","TATTATAACAAATCGG",1,82.14,10.64,-0.13,0.05,2.84,1.12,0,">1 nonsynonymous","N64I D97E P197L",3
"lib1","SARS-CoV-2","TATTATAAGTTACTAA",3,28.15,6.63,-4.13,0.44,1.5,1.12,0.03,">1 nonsynonymous","S29M Y35R G51H T55L F62G R179L",6
"lib1","SARS-CoV-2","TATTATAATAAACATT",5,28.23,10.16,-0.61,0.14,2.55,1.08,0.01,"1 nonsynonymous","P133M",1
"lib1","SARS-CoV-2","TATTATACAGTACTTA",5,0.03,NA,NA,NA,NA,NA,NA,"stop","R78E P161* S200E",3
"lib1","SARS-CoV-2","TATTATACCACGGGAT",6,25.43,6.15,-4.62,1.12,1.5,1.19,0.04,">1 nonsynonymous","T55N R127L P149T F167C V173H T201Y",6
"lib1","SARS-CoV-2","TATTATACGATGCGTA",3,115.81,8.55,-2.22,0.1,2.2,1.08,0,">1 nonsynonymous","R73P F160L",2
"lib1","SARS-CoV-2","TATTATACGGAGTGGC",5,57.24,9.49,-1.27,0.15,1.7,1.09,0.01,">1 nonsynonymous","A14F D59T S184F",3
"lib1","SARS-CoV-2","TATTATACTTCAGAAA",1,39.91,9.34,-1.43,0.13,1.9,1.12,0.01,">1 nonsynonymous","N13F T46F L131V L187D",4
"lib1","SARS-CoV-2","TATTATAGAGAAATGC",8,75.76,10.68,-0.09,0.06,2.87,1.09,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","TATTATAGAGAAGCAA",5,38.28,10.76,0,0.05,2.95,1.03,0,">1 nonsynonymous","T55G Y66I",2
"lib1","SARS-CoV-2","TATTATAGATAACTTA",12,117.43,10.34,-0.43,0.03,2.86,1.06,0,"1 nonsynonymous","F62E",1
"lib1","SARS-CoV-2","TATTATATACAAATCT",2,19.41,6,-4.76,1.22,3,1.14,0,">1 nonsynonymous","A81K W106D K114E",3
"lib1","SARS-CoV-2","TATTATATACCCACGG",3,33.91,9.54,-1.22,0.05,2.77,1.08,0,">1 nonsynonymous","Y39N Y119S",2
"lib1","SARS-CoV-2","TATTATATATAAATAC",13,28.39,6.42,-4.34,0.51,1.5,1.13,0.02,">1 nonsynonymous","C61K G74M D97V A105R",4
"lib1","SARS-CoV-2","TATTATATGAGAACCC",4,73.35,6,-4.76,2,3,1.16,0,">1 nonsynonymous","I2L F8S N107R Y165L",4
"lib1","SARS-CoV-2","TATTATATTACCGGTT",1,82.34,9.38,-1.39,0.08,2.53,1.11,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","TATTATATTTTGGATG",13,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V P82Y",2
"lib1","SARS-CoV-2","TATTATCAAGAATCAC",7,54.01,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","K26S F47L P82N D98N S139R",5
"lib1","SARS-CoV-2","TATTATCAATCTAAAA",4,51.11,9.79,-0.97,0.14,1.91,1.09,0,">1 nonsynonymous","S41L V52N S147F",3
"lib1","SARS-CoV-2","TATTATCATACGACTT",2,0,NA,NA,NA,NA,NA,NA,"stop","T3R D59*",2
"lib1","SARS-CoV-2","TATTATCATCCTGCCA",4,14.89,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","K56S I88M F99R",3
"lib1","SARS-CoV-2","TATTATCCAAAACCTC",2,66.17,10.87,0.1,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTATCCAACACAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W N40L Q144L",3
"lib1","SARS-CoV-2","TATTATCCACCTCATA",5,57.97,6,-4.76,0.53,1.5,1.12,0,">1 nonsynonymous","V11F L60R G117S Y123W L131T",5
"lib1","SARS-CoV-2","TATTATCCATTCGGAC",9,7.65,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib1","SARS-CoV-2","TATTATCCATTGACAA",2,39.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11P S43P Y123R C158L",4
"lib1","SARS-CoV-2","TATTATCCTATAGTAG",1,12.45,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","W23R",1
"lib1","SARS-CoV-2","TATTATCCTCTCGTGC",4,16.98,6,-4.76,2,1.5,1.16,0.05,">1 nonsynonymous","D97M V103H D137F G174H",4
"lib1","SARS-CoV-2","TATTATCGAACAAATG",5,37.8,10.68,-0.09,0.04,2.84,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","TATTATCGCCGCATTC",12,1.28,NA,NA,NA,NA,NA,NA,"stop","E10M A18T R127L F134* Q144S",5
"lib1","SARS-CoV-2","TATTATCGGATTATTC",9,149.86,10.54,-0.22,0.03,2.94,1.01,0,">1 nonsynonymous","Q84K S164Y",2
"lib1","SARS-CoV-2","TATTATCTAAAACTCC",1,32.91,8.68,-2.08,0.21,2.28,1.1,0.02,">1 nonsynonymous","L57V K87A N118T",3
"lib1","SARS-CoV-2","TATTATCTGCACAAAG",6,0.8,NA,NA,NA,NA,NA,NA,"stop","N92D Y119* I142* F167L T201F",5
"lib1","SARS-CoV-2","TATTATCTTAGGCCTA",2,25.96,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3M G83L S139G C150H",4
"lib1","SARS-CoV-2","TATTATGAATGTCCAG",10,0.01,NA,NA,NA,NA,NA,NA,"stop","W23S G83H Y91* G155R P161T",5
"lib1","SARS-CoV-2","TATTATGACCAAGTTA",1,43.97,10.36,-0.4,0.09,2.66,1,0,">1 nonsynonymous","A81V T100F V153F",3
"lib1","SARS-CoV-2","TATTATGACCTGATTA",5,56.44,6.24,-4.52,0.64,1.5,1.17,0.02,">1 nonsynonymous","K26R L57E G116T G155P G172N",5
"lib1","SARS-CoV-2","TATTATGCGACAGAAA",5,101.53,10.04,-0.72,0.08,2.63,1.03,0,">1 nonsynonymous","S41R T55S P96G V173A",4
"lib1","SARS-CoV-2","TATTATGGATAATACA",1,18.2,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T55A Y91P N118S",3
"lib1","SARS-CoV-2","TATTATGTAAAGGGTA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","I2V D68K C150* G152S",4
"lib1","SARS-CoV-2","TATTATGTACTGAGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","S29* S43V D90L Y178H",4
"lib1","SARS-CoV-2","TATTATGTAGATGTAA",1,30.94,10.75,-0.02,0.08,2.95,1,0,">1 nonsynonymous","P191T T201K",2
"lib1","SARS-CoV-2","TATTATGTAGCACAAA",2,59.42,9.65,-1.11,0.12,2.45,1.14,0.01,">1 nonsynonymous","A42R N107T",2
"lib1","SARS-CoV-2","TATTATGTGATCGATA",5,57.79,10.81,0.04,0.09,2.69,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTATTAACCATAAA",4,0.33,NA,NA,NA,NA,NA,NA,"stop","F8S F12* P96I N151A",4
"lib1","SARS-CoV-2","TATTATTAACTGAAAG",3,25.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25V L38T V52D",3
"lib1","SARS-CoV-2","TATTATTAATCCACGA",9,81.16,6.15,-4.62,0.62,1.5,1.14,0.01,">1 nonsynonymous","L38H K87E N110V Q163T",4
"lib1","SARS-CoV-2","TATTATTACAAGGGAA",5,0.35,NA,NA,NA,NA,NA,NA,"stop","F12E S139* Y178A",3
"lib1","SARS-CoV-2","TATTATTCAATGGCAG",4,24.62,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F8C P54D I142K G152W",4
"lib1","SARS-CoV-2","TATTATTCCTCAAATA",9,69.02,6,-4.76,0.96,1.5,1.16,0.01,">1 nonsynonymous","A81F Y165K",2
"lib1","SARS-CoV-2","TATTATTTCCCAAAAA",1,46.28,9.37,-1.39,0.07,2.89,1.1,0,"1 nonsynonymous","G174V",1
"lib1","SARS-CoV-2","TATTATTTCCCCGTTC",5,69.14,10.78,0.01,0.07,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TATTATTTTAACAAAA",1,1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TATTCAAACATATCAT",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S K128L N151L",3
"lib1","SARS-CoV-2","TATTCAAAGGCACCAT",1,26.63,9.81,-0.95,0.11,2.15,1.12,0.01,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","TATTCAAAGGTGACAA",4,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T S41A G155E",3
"lib1","SARS-CoV-2","TATTCAAATACCCTTA",1,54.28,10.6,-0.16,0.04,2.92,1.04,0,">1 nonsynonymous","T55I V173A",2
"lib1","SARS-CoV-2","TATTCAAATTAATGTA",3,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T A81P Y93T S113G N118F S139Y",6
"lib1","SARS-CoV-2","TATTCAACGGCGTTTT",9,0.47,NA,NA,NA,NA,NA,NA,"stop","T55* R127M",2
"lib1","SARS-CoV-2","TATTCAACGTTTAGAA",3,25.08,10.76,0,0.05,2.8,1.17,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TATTCAACTCACAAAA",5,0.61,NA,NA,NA,NA,NA,NA,"stop","T3G E10S L38M N92I G116*",5
"lib1","SARS-CoV-2","TATTCAACTTTAAGAT",3,38.15,9.4,-1.36,0.2,1.77,1.1,0.02,">1 nonsynonymous","G86S K114Q",2
"lib1","SARS-CoV-2","TATTCAAGGTCCGAGG",2,11.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15R P82Y S139N",3
"lib1","SARS-CoV-2","TATTCAATCCAGACGT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T S36V F44C N64A T85M A89Y Y119A S139Q",8
"lib1","SARS-CoV-2","TATTCAATGTGCCCCA",5,53.52,10.15,-0.62,0.07,2.74,1.01,0,">1 nonsynonymous","E10A T63M D90E T201M",4
"lib1","SARS-CoV-2","TATTCAATTCTGAAGA",2,88.06,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C61R T85S D112V P149L T170E Y175V",6
"lib1","SARS-CoV-2","TATTCAATTTACTTGA",1,7.81,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14G V20L G116M K132E L188T A192T K198H",7
"lib1","SARS-CoV-2","TATTCAATTTGGTAGA",1,8.5,10.74,-0.02,0.18,2.78,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATTCACAGTAACACA",5,35.3,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","L5I F8W G51C D68G",4
"lib1","SARS-CoV-2","TATTCACATCAGTGGA",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R C102S",2
"lib1","SARS-CoV-2","TATTCACATGATATAC",4,67.06,10.71,-0.06,0.06,2.96,1.01,0,">1 nonsynonymous","N110D E141R",2
"lib1","SARS-CoV-2","TATTCACCGAGGTTTT",2,67.37,10.66,-0.11,0.05,2.91,1.04,0,">1 nonsynonymous","S53H Q84S",2
"lib1","SARS-CoV-2","TATTCACGTTCAACCG",2,64.79,10.41,-0.35,0.06,2.88,1.03,0,">1 nonsynonymous","A33P D97W",2
"lib1","SARS-CoV-2","TATTCACTAGCATCTA",4,41.6,6.69,-4.07,0.62,1.5,1.16,0.05,">1 nonsynonymous","A105T R127T",2
"lib1","SARS-CoV-2","TATTCACTTCTTTTCC",3,84.43,10.72,-0.05,0.05,2.9,1.04,0,"1 nonsynonymous","A190Q",1
"lib1","SARS-CoV-2","TATTCAGAAGTCGCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122W G146V",2
"lib1","SARS-CoV-2","TATTCAGACCAGAATT",3,13.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N64E R127Q",2
"lib1","SARS-CoV-2","TATTCAGCCCCTCAAA",2,23.94,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","Y121M Y143D",2
"lib1","SARS-CoV-2","TATTCAGGCGATGAAA",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G D137Q Y143T N151S P169M S200Y",6
"lib1","SARS-CoV-2","TATTCATAACTATAAG",2,28.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A89E P96C K199L",3
"lib1","SARS-CoV-2","TATTCATAAGTGATTC",4,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F R136Y G155M G174P",4
"lib1","SARS-CoV-2","TATTCATACCGCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59E W106L",2
"lib1","SARS-CoV-2","TATTCATAGCTATTCC",16,34.47,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V71W D75T A105P T170Y",4
"lib1","SARS-CoV-2","TATTCATCAGTTATGG",11,119.05,7.32,-3.45,0.19,1.5,1.14,0.01,">1 nonsynonymous","S41I K114N G146M N171S",4
"lib1","SARS-CoV-2","TATTCATCTGATACAC",2,24.58,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C6S G51C L57W",3
"lib1","SARS-CoV-2","TATTCATGAGATAGCA",6,1.65,NA,NA,NA,NA,NA,NA,"stop","E76* D97V N157D V182N",4
"lib1","SARS-CoV-2","TATTCATGCGATACAA",3,1.95,NA,NA,NA,NA,NA,NA,"stop","T85P Y175* S200I",3
"lib1","SARS-CoV-2","TATTCATGCTGTAAGG",1,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","TATTCATGCTTACTAT",4,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G N13D V37I V103K Y178G",5
"lib1","SARS-CoV-2","TATTCATGGATAACCA",9,0.76,NA,NA,NA,NA,NA,NA,"stop","N1* T170R",2
"lib1","SARS-CoV-2","TATTCATTAACTGTGT",1,9.46,10.5,-0.27,0.14,2.69,1,0.01,">1 nonsynonymous","S45G T100S K198R",3
"lib1","SARS-CoV-2","TATTCCAAAAGGGTAA",6,36.03,6,-4.76,2,3,1.13,0,">1 nonsynonymous","I80R P96L G155R G174L",4
"lib1","SARS-CoV-2","TATTCCAACAAGGTTC",6,95.83,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N107A N120P L162T G174K",4
"lib1","SARS-CoV-2","TATTCCAACTAAAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V11* C49T Y119R T170L",4
"lib1","SARS-CoV-2","TATTCCAAGAAGCCCA",2,54.45,10.73,-0.04,0.06,2.98,1,0,"1 nonsynonymous","E186H",1
"lib1","SARS-CoV-2","TATTCCACGTATACTA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N40Q N64M L95N G101* Y119T",5
"lib1","SARS-CoV-2","TATTCCACTGACGAAC",3,52.89,8.13,-2.63,0.2,1.85,1.06,0.02,">1 nonsynonymous","I2V F126K Y143V T170S",4
"lib1","SARS-CoV-2","TATTCCACTTCATGAG",1,15.29,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K48S D90S A105F",3
"lib1","SARS-CoV-2","TATTCCAGCATATATA",1,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M A105G",2
"lib1","SARS-CoV-2","TATTCCAGTCGAGCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150A",1
"lib1","SARS-CoV-2","TATTCCATAACTACCA",1,9.23,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y91G N120D G146Q F167S",4
"lib1","SARS-CoV-2","TATTCCATAAGAGGTC",7,153.77,9.27,-1.49,0.06,2.68,1.11,0,">1 nonsynonymous","K48S Y143V",2
"lib1","SARS-CoV-2","TATTCCATAAGTGGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","TATTCCATATGGACGG",3,42.88,10.48,-0.28,0.08,2.86,1.14,0,"1 nonsynonymous","V115D",1
"lib1","SARS-CoV-2","TATTCCATATTGTTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D34I C49M K56* A67F D90P V103P P169L K198S",8
"lib1","SARS-CoV-2","TATTCCCAACCGCTAC",1,9.74,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","P7Q L95R N107K",3
"lib1","SARS-CoV-2","TATTCCCAATATATTG",1,20.52,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","F12E N118S Y175R S184H",4
"lib1","SARS-CoV-2","TATTCCCACACTTCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9M T15P P54T F62* L95N",5
"lib1","SARS-CoV-2","TATTCCCACTATCAAG",6,0.3,NA,NA,NA,NA,NA,NA,"stop","C6R F44*",2
"lib1","SARS-CoV-2","TATTCCCCCTAGTTGA",7,33.67,9.35,-1.41,0.22,1.5,1.01,0.02,">1 nonsynonymous","S36Y L60R A67N",3
"lib1","SARS-CoV-2","TATTCCCGCCGAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A22T L95A S113E E135V Y165V",6
"lib1","SARS-CoV-2","TATTCCCTGCTTACCT",2,45.96,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","G9I S36C Q84C D112A",4
"lib1","SARS-CoV-2","TATTCCGAAGATTGGT",9,151.48,7.49,-3.27,0.18,1.5,1.13,0.01,">1 nonsynonymous","Y123E R136F",2
"lib1","SARS-CoV-2","TATTCCGAAGCCGGCG",8,115.76,6.17,-4.59,0.45,1.5,1.19,0.01,"1 nonsynonymous","Y93N",1
"lib1","SARS-CoV-2","TATTCCGGGACTGACA",6,64.95,6,-4.76,2,3,1.22,0,">1 nonsynonymous","L60R L162G Q176R",3
"lib1","SARS-CoV-2","TATTCCGTTAATAATT",5,2.64,NA,NA,NA,NA,NA,NA,"stop","K56R D112* Y121*",3
"lib1","SARS-CoV-2","TATTCCTAAGGACGTT",18,6.52,NA,NA,NA,NA,NA,NA,"stop","A14S S69* Q163T",3
"lib1","SARS-CoV-2","TATTCCTACTACAAAT",4,62.89,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","S41H L125M S139F Y143K",4
"lib1","SARS-CoV-2","TATTCCTCCCACAAAT",3,59.61,10.06,-0.71,0.1,1.9,1.03,0,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TATTCCTGAAACCCTA",1,20.62,6.4,-4.36,0.66,1.5,1.08,0.03,">1 nonsynonymous","L95H Y119S Y165Q A190G T201V",5
"lib1","SARS-CoV-2","TATTCCTTAAATAACA",1,33.83,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G116P R127I E135S",3
"lib1","SARS-CoV-2","TATTCCTTCTCTTAAC",2,57.03,10.49,-0.28,0.08,2.94,1.04,0,"1 nonsynonymous","S184L",1
"lib1","SARS-CoV-2","TATTCCTTGTCAATTA",8,39.9,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","G83C S113A G146L",3
"lib1","SARS-CoV-2","TATTCGAACTAATTGT",4,14.33,6.15,-4.61,0.66,1.5,1.11,0.02,">1 nonsynonymous","F99K S129R T201V",3
"lib1","SARS-CoV-2","TATTCGAAGAAACTCG",6,37.51,10.53,-0.23,0.07,2.9,1.1,0,"1 nonsynonymous","A105S",1
"lib1","SARS-CoV-2","TATTCGACATGAATGA",4,23.11,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T15K K56P N92T T201L",4
"lib1","SARS-CoV-2","TATTCGACCTTTGCCT",7,218.65,9.97,-0.8,0.09,2.36,1.03,0,">1 nonsynonymous","G83C I104T N110T",3
"lib1","SARS-CoV-2","TATTCGAGGTGTCCTA",4,15.41,10.3,-0.46,0.11,2.88,1.05,0.01,">1 nonsynonymous","S36A K128I",2
"lib1","SARS-CoV-2","TATTCGATCAAATGCT",4,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N A81G A89K S164R T201M",5
"lib1","SARS-CoV-2","TATTCGATGAGTGCAG",4,77.89,9.84,-0.93,0.09,2.23,1.07,0,"1 nonsynonymous","F8C",1
"lib1","SARS-CoV-2","TATTCGATTTCACAAA",2,1.85,NA,NA,NA,NA,NA,NA,"stop","L5P I142R Q168*",3
"lib1","SARS-CoV-2","TATTCGCAAATATGCA",6,17.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13K G51E R127S N151W F156M",5
"lib1","SARS-CoV-2","TATTCGCGAAAAGTTG",8,10.29,6,-4.76,1.11,1.5,1.17,0.01,">1 nonsynonymous","V37W V103S",2
"lib1","SARS-CoV-2","TATTCGCGTACACGTT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","F44I T55N K87G L122P I142* C158E C195M",7
"lib1","SARS-CoV-2","TATTCGGCAATTACCT",10,169.31,10.73,-0.03,0.06,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TATTCGTAAAACGAAC",9,157.8,10.78,0.02,0.06,2.93,1.01,0,">1 nonsynonymous","T55N P149M",2
"lib1","SARS-CoV-2","TATTCGTAATCTGTGC",2,33.37,10.04,-0.73,0.12,2.11,1.01,0.01,">1 nonsynonymous","F47L C61G D98S",3
"lib1","SARS-CoV-2","TATTCGTATTTTTTTC",5,28.15,10.67,-0.1,0.06,2.85,1.08,0,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","TATTCGTCCGCTGTTG",6,140.04,10.61,-0.16,0.04,2.9,1.05,0,">1 nonsynonymous","T3M K114L",2
"lib1","SARS-CoV-2","TATTCGTGAAATGCGT",4,23.11,6,-4.76,0.5,3,1.09,0,">1 nonsynonymous","I80R N157D P169C",3
"lib1","SARS-CoV-2","TATTCGTGGGTACAAG",3,12.25,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V181S",1
"lib1","SARS-CoV-2","TATTCGTTTAATGTTT",11,6.37,NA,NA,NA,NA,NA,NA,"stop","K56* A89S",2
"lib1","SARS-CoV-2","TATTCTAAATTAATTT",2,13.49,6.53,-4.23,0.67,1.73,1.26,0.04,">1 nonsynonymous","I2T D68L L95R F134K F156S",5
"lib1","SARS-CoV-2","TATTCTAATCGCACGG",1,41.68,9.02,-1.74,0.22,1.69,1.22,0.02,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","TATTCTAATTAATGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M C102G Y175V",3
"lib1","SARS-CoV-2","TATTCTAGACTTGGGA",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D A33G V77G G83L V103D S184T",6
"lib1","SARS-CoV-2","TATTCTAGCCGCATGA",2,87.31,6.11,-4.66,0.96,1.5,1.16,0.02,">1 nonsynonymous","E76N P161G Y175R",3
"lib1","SARS-CoV-2","TATTCTAGGTTTAGGG",3,36.6,10.69,-0.07,0.06,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTCTATAATAAACT",4,6.25,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","P96F S139Y",2
"lib1","SARS-CoV-2","TATTCTATATAACCAA",2,12.14,10.61,-0.16,0.19,2.95,1,0.01,"1 nonsynonymous","A42W",1
"lib1","SARS-CoV-2","TATTCTATGTCGCACT",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L P96F G116A K198T",4
"lib1","SARS-CoV-2","TATTCTATTCGAAGAT",15,99.09,6.18,-4.59,0.49,1.5,1.15,0.01,">1 nonsynonymous","I28N P96M",2
"lib1","SARS-CoV-2","TATTCTCAAGAGTTAT",4,81.62,10.71,-0.05,0.06,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TATTCTCAATGTGAGG",7,169.4,10.14,-0.62,0.09,2.49,1.02,0,"1 nonsynonymous","A81I",1
"lib1","SARS-CoV-2","TATTCTCACTAGCTAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92H V182A A190S",3
"lib1","SARS-CoV-2","TATTCTCCTCAGCTCG",1,20.22,6,-4.76,2,3,1.09,0,">1 nonsynonymous","K56R Y93K Y165P",3
"lib1","SARS-CoV-2","TATTCTCGATAGCACT",2,67.17,10.66,-0.11,0.05,2.86,1.03,0,">1 nonsynonymous","D98F V173L",2
"lib1","SARS-CoV-2","TATTCTCGCTTCGCTG",4,51.06,10.79,0.02,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTCTCTATTATCCA",4,6.09,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","TATTCTCTGCAAGCAA",2,14.85,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A33E D68Q",2
"lib1","SARS-CoV-2","TATTCTCTTAAATTGA",2,22.89,6,-4.76,2,1.5,1.38,0.05,">1 nonsynonymous","L5E F99S Y143S N157P Q176P",5
"lib1","SARS-CoV-2","TATTCTGAAACACCAG",1,10.77,10.93,0.17,0.09,3,1,0,">1 nonsynonymous","G9Y Y35W",2
"lib1","SARS-CoV-2","TATTCTGAAATCATAA",14,124,9.78,-0.98,0.15,1.84,1.12,0.01,"1 nonsynonymous","P96V",1
"lib1","SARS-CoV-2","TATTCTGGATGACTAA",2,28.54,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","F44Y Y50K S69Q F99G T201L",5
"lib1","SARS-CoV-2","TATTCTTACTTTCGTT",1,58.9,10.08,-0.68,0.12,2.36,1.06,0,">1 nonsynonymous","G83N W106L S184T",3
"lib1","SARS-CoV-2","TATTCTTCTAGATTAT",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129N G155L",2
"lib1","SARS-CoV-2","TATTCTTTATGGAGGC",11,67.62,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N64P A89R Y143S Q168A",4
"lib1","SARS-CoV-2","TATTCTTTATTGATTA",5,61.43,8.67,-2.1,0.12,2.49,1.07,0,">1 nonsynonymous","S41T Y91K Y119S L122G",4
"lib1","SARS-CoV-2","TATTCTTTCAAGATAA",14,63.78,6,-4.76,1.57,1.5,1.15,0.01,">1 nonsynonymous","V103R S129G P149A",3
"lib1","SARS-CoV-2","TATTCTTTTAAAATCT",4,90.31,6,-4.76,0.84,1.5,1.18,0.01,">1 nonsynonymous","Y35A T46F N107Y",3
"lib1","SARS-CoV-2","TATTCTTTTTTACGGC",4,89.3,10.09,-0.68,0.05,2.91,1.02,0,">1 nonsynonymous","Y39A I142Q",2
"lib1","SARS-CoV-2","TATTGAAAAACGAAAG",2,29.88,6,-4.76,2,3,1.18,0,">1 nonsynonymous","N4L N40Y T170F L183V",4
"lib1","SARS-CoV-2","TATTGAAAAATCTTAA",4,53.34,6.21,-4.56,0.42,1.5,1.12,0.01,">1 nonsynonymous","L95P F134T",2
"lib1","SARS-CoV-2","TATTGAAAAATGTACG",1,5.32,8.59,-2.18,0.4,1.5,1,0.03,">1 nonsynonymous","F47G S147R",2
"lib1","SARS-CoV-2","TATTGAAAATTCGAAG",2,18.94,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L5V W23R C102V G166S",4
"lib1","SARS-CoV-2","TATTGAAATGACCGGG",2,5.86,NA,NA,NA,NA,NA,NA,"stop","N58T P82* L122D",3
"lib1","SARS-CoV-2","TATTGAACAATGTCTA",2,19.3,10.75,-0.02,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTGAACACCTATCC",3,18.55,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5V S45V C61E P82S V180I",5
"lib1","SARS-CoV-2","TATTGAACAGGTAGAA",3,28.69,10.42,-0.35,0.06,2.94,1.02,0,">1 nonsynonymous","N24T C61F N151S",3
"lib1","SARS-CoV-2","TATTGAACATGGCGAT",5,49.54,8.51,-2.25,0.13,1.58,1.13,0,">1 nonsynonymous","V77F V115Y",2
"lib1","SARS-CoV-2","TATTGAACCCTAGATC",2,77.86,6,-4.76,0.91,1.5,1.17,0.01,">1 nonsynonymous","K114L Y159K",2
"lib1","SARS-CoV-2","TATTGAACGAGAGATC",2,27.34,9.67,-1.09,0.07,2.72,1.01,0,">1 nonsynonymous","S19P S53P L60V I142L",4
"lib1","SARS-CoV-2","TATTGAACGATGAAAT",1,16.82,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","Q84C K114R Y119A V153I Y159G Y165D",6
"lib1","SARS-CoV-2","TATTGAACGCGCCAAA",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97E N107E",2
"lib1","SARS-CoV-2","TATTGAACGTGTTTGG",6,78.83,9.28,-1.48,0.13,2.58,1.19,0.01,">1 nonsynonymous","K56H N120T N151F",3
"lib1","SARS-CoV-2","TATTGAAGACTCAGTA",1,9.37,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N92I G101Y K114R G146L",4
"lib1","SARS-CoV-2","TATTGAAGCCTTACGC",3,42.81,6.01,-4.76,1.26,1.5,1.21,0.04,">1 nonsynonymous","F44L C150F N171I",3
"lib1","SARS-CoV-2","TATTGAAGGACACACG",2,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S K94A A105R L131C C158F F167M",6
"lib1","SARS-CoV-2","TATTGAAGGCGTATAT",3,13.14,8.29,-2.47,0.27,1.96,1.13,0.03,">1 nonsynonymous","Y91Q G174F",2
"lib1","SARS-CoV-2","TATTGAAGGCGTTTCC",1,21.05,6,-4.76,2,1.5,1.26,0.02,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","TATTGAAGTTACTCCC",1,11.06,6,-4.76,2,3,1.12,0,">1 nonsynonymous","G9A P82V F160T Y175S T201G",5
"lib1","SARS-CoV-2","TATTGAATAATTTTGG",4,12.03,6.14,-4.63,0.49,1.5,1.1,0.01,">1 nonsynonymous","C6P A14T N107R F134S",4
"lib1","SARS-CoV-2","TATTGAATACCTTAGC",3,105.23,10.63,-0.13,0.04,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTGAATGATAGTTA",1,9.94,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V20L K56R A81S A105P",4
"lib1","SARS-CoV-2","TATTGAATGTCTCCGG",2,64.66,10.81,0.04,0.06,2.91,1.05,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","TATTGACCGCGAATAT",8,13.59,6,-4.76,2,1.5,1.34,0.03,">1 nonsynonymous","P7L L60V V103P",3
"lib1","SARS-CoV-2","TATTGACGAACAACCA",4,49.14,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I28S Y50D V77F G86S",4
"lib1","SARS-CoV-2","TATTGACTTTTCCCTA",3,18.81,10.46,-0.31,0.09,2.84,1.11,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","TATTGAGCTAAACTAT",5,74.22,6,-4.76,1.35,1.5,1.16,0.02,">1 nonsynonymous","C6N Y121G K128I",3
"lib1","SARS-CoV-2","TATTGAGTGTTGATAA",2,0.99,NA,NA,NA,NA,NA,NA,"stop","S41F K56R N120L T140A P149*",5
"lib1","SARS-CoV-2","TATTGATACACACGTA",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I K94V T100P",3
"lib1","SARS-CoV-2","TATTGATACCTACAAA",2,50.28,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L38W W106N P161M",3
"lib1","SARS-CoV-2","TATTGATACTGAGGCT",1,0.73,NA,NA,NA,NA,NA,NA,"stop","E10S S36*",2
"lib1","SARS-CoV-2","TATTGATAGAGGAAGG",2,9.13,10.77,0,0.15,2.86,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TATTGATATGTAAACG",13,54.76,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G86E F160L",2
"lib1","SARS-CoV-2","TATTGATCACGAATCT",12,221.68,10.62,-0.15,0.02,2.93,1.02,0,">1 nonsynonymous","L60S P149D",2
"lib1","SARS-CoV-2","TATTGATCCTAACGGT",3,20.94,8.67,-2.09,0.3,1.8,1.31,0.03,">1 nonsynonymous","K94N Q144C",2
"lib1","SARS-CoV-2","TATTGATGCGCTCCCG",3,33.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F17N V32E N107G I142T",4
"lib1","SARS-CoV-2","TATTGATTATCAGTCT",2,53.38,10.72,-0.04,0.04,2.88,1.1,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","TATTGATTCAAGTTGC",1,1.14,NA,NA,NA,NA,NA,NA,"stop","G9* D90Y C102V Y119Q",4
"lib1","SARS-CoV-2","TATTGATTCCCGCAAA",8,19.12,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V20R D34N",2
"lib1","SARS-CoV-2","TATTGATTGAGAGCAG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","S19L G51* C61S Q84N K94S Q163T",6
"lib1","SARS-CoV-2","TATTGATTTATTATTA",3,11.5,6,-4.76,2,3,1.03,0,">1 nonsynonymous","S53C D68R G86E",3
"lib1","SARS-CoV-2","TATTGATTTGAAAGAG",6,34.7,6,-4.76,1.3,2.36,1.16,0,">1 nonsynonymous","T3Y R25C S139P Y165A",4
"lib1","SARS-CoV-2","TATTGCAAAATACTAT",4,7.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C31T N58C V182R",3
"lib1","SARS-CoV-2","TATTGCAAGATATTAA",6,64.44,9.2,-1.57,0.09,1.83,1.12,0,">1 nonsynonymous","V65T Y178L K199P",3
"lib1","SARS-CoV-2","TATTGCACCAGAGGAA",11,58.22,6.1,-4.66,0.57,1.5,1.17,0.01,">1 nonsynonymous","K94L W106R",2
"lib1","SARS-CoV-2","TATTGCACCCACCATA",5,1.69,NA,NA,NA,NA,NA,NA,"stop","L95* I104V L122S P149L F185S",5
"lib1","SARS-CoV-2","TATTGCAGCCATTTTT",3,95.43,10.26,-0.5,0.03,2.9,1.02,0,">1 nonsynonymous","G9L P54H C61K P149Q",4
"lib1","SARS-CoV-2","TATTGCATAGGCAAAC",8,3.13,NA,NA,NA,NA,NA,NA,"stop","D90G D97* Y121K",3
"lib1","SARS-CoV-2","TATTGCCAATGTCGCA",5,46.86,9.95,-0.82,0.26,1.65,1.1,0.02,">1 nonsynonymous","E10L L57M A81S N110L K199W",5
"lib1","SARS-CoV-2","TATTGCCATATATGAC",1,15.34,10.37,-0.4,0.2,2.92,1,0.01,"1 nonsynonymous","W106F",1
"lib1","SARS-CoV-2","TATTGCCCGTAAATTT",1,10,10.33,-0.43,0.14,2.86,1.01,0.01,"1 nonsynonymous","Y91V",1
"lib1","SARS-CoV-2","TATTGCCGAATAAGTA",2,10.51,6,-4.76,1.47,3,1.04,0,">1 nonsynonymous","C61S Y93V A145L",3
"lib1","SARS-CoV-2","TATTGCCTAAACAGAA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","W23* Y66G P161F V173C",4
"lib1","SARS-CoV-2","TATTGCCTATTGTAGA",4,32.23,10.45,-0.31,0.09,2.83,1.03,0,">1 nonsynonymous","N4I A192L",2
"lib1","SARS-CoV-2","TATTGCCTGTGGCGAG",1,31.16,6.92,-3.84,0.3,1.5,1.09,0.02,">1 nonsynonymous","D112G S200F",2
"lib1","SARS-CoV-2","TATTGCGCCACTGCAA",7,240.76,10.53,-0.24,0.04,2.9,1.03,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","TATTGCGCGATTGAAA",11,111.48,6,-4.76,1.69,1.5,1.19,0.01,">1 nonsynonymous","N4G S45M F99V I138M G152S Q176W",6
"lib1","SARS-CoV-2","TATTGCGGTACAAATT",4,7.9,6,-4.76,2,1.5,1.4,0.08,">1 nonsynonymous","T15I L122P",2
"lib1","SARS-CoV-2","TATTGCGTGAACGGGG",5,75.16,9.77,-0.99,0.09,2.33,1.08,0,">1 nonsynonymous","Q79G Y178F S200Q",3
"lib1","SARS-CoV-2","TATTGCGTTCGGCCTG",4,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q D59T A89W L95W N107T",5
"lib1","SARS-CoV-2","TATTGCTCGGTAATCT",1,43.77,9.96,-0.8,0.07,2.76,1.07,0,">1 nonsynonymous","L5M F44C",2
"lib1","SARS-CoV-2","TATTGCTCTTAATATC",8,27.01,6,-4.76,2,3,1.24,0,">1 nonsynonymous","F12P N64K D90P D98I K199L",5
"lib1","SARS-CoV-2","TATTGCTTATGTTCGA",10,116.52,10.62,-0.14,0.04,2.91,1.02,0,"1 nonsynonymous","P7M",1
"lib1","SARS-CoV-2","TATTGCTTTAAACCCA",1,43.29,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8T F17N K56F Y121G",4
"lib1","SARS-CoV-2","TATTGGAAAAAAACAA",5,12.03,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P7G L60H P82Y T170R",4
"lib1","SARS-CoV-2","TATTGGAAATGAAACA",5,21.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23L A67S G86Q A190L",4
"lib1","SARS-CoV-2","TATTGGAACATGACAG",4,9.58,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P96F S113I P149I C158S",4
"lib1","SARS-CoV-2","TATTGGACAGGACACA",6,68.89,10.43,-0.33,0.1,2.86,1.02,0,"1 nonsynonymous","Y91C",1
"lib1","SARS-CoV-2","TATTGGACAGTCACAC",5,70.78,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N110A S129F Q168P V173G",4
"lib1","SARS-CoV-2","TATTGGACCACAATAG",1,12.91,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","P82Q I88C L95E",3
"lib1","SARS-CoV-2","TATTGGACGAGTCAAA",3,49.44,6,-4.76,1.1,1.5,1.14,0.02,">1 nonsynonymous","P82S G86Q T148S",3
"lib1","SARS-CoV-2","TATTGGATATGGGCGG",7,0.08,NA,NA,NA,NA,NA,NA,"stop","A14S N151* G174V",3
"lib1","SARS-CoV-2","TATTGGCAAAACCTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N F126T I138A",3
"lib1","SARS-CoV-2","TATTGGCAGCACTGAG",4,4,NA,NA,NA,NA,NA,NA,"stop","L5G R25K T85* K128L",4
"lib1","SARS-CoV-2","TATTGGCATGACTTGC",2,48.59,10.63,-0.14,0.09,2.98,1.03,0,"1 nonsynonymous","N64T",1
"lib1","SARS-CoV-2","TATTGGCGTTACATCG",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R R136S",2
"lib1","SARS-CoV-2","TATTGGCTCATTACAT",4,67.69,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A18S N40R R73V Y91P D97I N118P Y143R",7
"lib1","SARS-CoV-2","TATTGGCTCTTTATAG",3,9.23,10.51,-0.26,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTGGTCGATCCAAG",4,221.06,10.71,-0.05,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTGTAACGATTTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","F44L I142S Y175*",3
"lib1","SARS-CoV-2","TATTGTAAGATAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13P L122*",2
"lib1","SARS-CoV-2","TATTGTAATCACCTAC",12,167.86,10.38,-0.38,0.04,2.88,1.01,0,">1 nonsynonymous","I2L N30Q Y121F",3
"lib1","SARS-CoV-2","TATTGTACAACCATAT",5,85.67,9.5,-1.26,0.06,2.87,1.04,0,">1 nonsynonymous","K56V F126K T140K L187Q",4
"lib1","SARS-CoV-2","TATTGTACAAGAGATC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","F99H A105R N157S T201*",4
"lib1","SARS-CoV-2","TATTGTACCGCAAACA",1,0.89,NA,NA,NA,NA,NA,NA,"stop","C61G D112*",2
"lib1","SARS-CoV-2","TATTGTACGGATGTGT",9,130.99,10.6,-0.16,0.03,2.9,1.07,0,">1 nonsynonymous","T63A N130F",2
"lib1","SARS-CoV-2","TATTGTAGATGCTTAC",6,54.75,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","S36D N58F F167L Q176P",4
"lib1","SARS-CoV-2","TATTGTAGCATTTCAT",7,154.56,10.56,-0.2,0.04,2.87,1.08,0,">1 nonsynonymous","G9S V77L",2
"lib1","SARS-CoV-2","TATTGTATTTTGCTTA",14,105.96,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L125T D137P",2
"lib1","SARS-CoV-2","TATTGTCACAATTATA",2,120.54,7.5,-3.26,0.11,2.27,1.15,0,">1 nonsynonymous","Y175D K198R",2
"lib1","SARS-CoV-2","TATTGTCGCGATCATG",1,29.45,9.95,-0.81,0.15,2.19,1.08,0.01,">1 nonsynonymous","F44D T63D N130G P149S",4
"lib1","SARS-CoV-2","TATTGTCGGTGTGGTC",5,38.85,9.41,-1.36,0.18,1.77,1.05,0.02,">1 nonsynonymous","G9Y P54R D90S R136W A190E K199D",6
"lib1","SARS-CoV-2","TATTGTCTTAACTTAT",4,96.25,10.75,-0.02,0.06,2.93,1.04,0,"1 nonsynonymous","D59Y",1
"lib1","SARS-CoV-2","TATTGTGAAGGACTGC",4,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C A14H C31S T55L I88R K114L",6
"lib1","SARS-CoV-2","TATTGTGCATTGCATA",8,132.65,9.35,-1.41,0.1,1.78,1.1,0,">1 nonsynonymous","N30R F44I R136M P149K",4
"lib1","SARS-CoV-2","TATTGTGGCTAGGGAG",4,10.96,6,-4.76,2,1.5,1.1,0.02,"1 nonsynonymous","L183G",1
"lib1","SARS-CoV-2","TATTGTTACTCTGCGA",1,9.96,10.25,-0.51,0.09,2.8,1,0,"1 nonsynonymous","I2G",1
"lib1","SARS-CoV-2","TATTGTTGACCCTCAA",1,94.75,7.97,-2.8,0.13,2.1,1.13,0.01,">1 nonsynonymous","S45G T55S Q84L Y175A P197W",5
"lib1","SARS-CoV-2","TATTGTTTATGAATTG",6,23.52,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6R K26W N58R D90F W106Q K114Y Y123N",7
"lib1","SARS-CoV-2","TATTGTTTATTTATCA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","R25T P149Y E154L Q176*",4
"lib1","SARS-CoV-2","TATTTAAAAAAGATAG",2,1.34,NA,NA,NA,NA,NA,NA,"stop","N1* K56V F70V D90S S139C Y143H",6
"lib1","SARS-CoV-2","TATTTAAAAGCCCCCC",7,157.1,10.66,-0.11,0.05,2.82,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTTAACAGGACATG",1,35.16,10.78,0.01,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTTAACTCGTATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36W L95N P177D T201E",4
"lib1","SARS-CoV-2","TATTTAAGTATGAGAT",3,44.1,9.12,-1.65,0.06,2.84,1.07,0,">1 nonsynonymous","N40S G166M",2
"lib1","SARS-CoV-2","TATTTAAGTGGCGCCA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","N40* Y119S",2
"lib1","SARS-CoV-2","TATTTAATAAGGAAAA",2,60.55,10.43,-0.34,0.06,2.72,1.07,0,">1 nonsynonymous","S41F E141L",2
"lib1","SARS-CoV-2","TATTTAATGAATTACT",1,13.66,8.95,-1.81,0.17,1.71,1.04,0.02,">1 nonsynonymous","G86S K94H",2
"lib1","SARS-CoV-2","TATTTAATGCTGCGCG",1,28.21,10.67,-0.1,0.05,2.94,1.05,0,"1 nonsynonymous","S129Y",1
"lib1","SARS-CoV-2","TATTTAATTACCGGTG",5,55.45,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T170V V181M K198A",3
"lib1","SARS-CoV-2","TATTTAATTGCCGATT",4,65.17,9.5,-1.26,0.13,1.98,1.08,0.01,">1 nonsynonymous","D90M D98H G152C T201Q",4
"lib1","SARS-CoV-2","TATTTACATGCTCATT",3,1.18,NA,NA,NA,NA,NA,NA,"stop","N58C N171V Y175*",3
"lib1","SARS-CoV-2","TATTTACGAGTAGATA",3,60.99,9.87,-0.9,0.09,1.99,1.05,0,">1 nonsynonymous","A14F K48Q",2
"lib1","SARS-CoV-2","TATTTACGGCCACACC",1,6.23,NA,NA,NA,NA,NA,NA,"stop","V11M N64L V71* F167M",4
"lib1","SARS-CoV-2","TATTTACTAAGGTTGA",3,40.4,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F12Q S139N G152L S184I",4
"lib1","SARS-CoV-2","TATTTACTATAGCGAT",2,69.96,10.04,-0.73,0.08,2.61,1.01,0,">1 nonsynonymous","A67S I138L",2
"lib1","SARS-CoV-2","TATTTACTCATTACTG",4,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77T A105P Y143S",3
"lib1","SARS-CoV-2","TATTTACTCGCACGCA",2,14.61,10.85,0.09,0.1,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTTACTTCCCGCAG",3,37.49,8.7,-2.07,0.27,1.5,1.13,0.03,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","TATTTAGACAAAGGGC",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T V71M P96V G117L",4
"lib1","SARS-CoV-2","TATTTAGCTGTATGAC",1,40.79,9.41,-1.36,0.06,2.76,1.12,0,">1 nonsynonymous","Y119H A190V",2
"lib1","SARS-CoV-2","TATTTAGTAAGCATAG",3,13.37,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","F44V G74V T148D L162D",4
"lib1","SARS-CoV-2","TATTTAGTAAGGAACC",1,58.3,10.83,0.07,0.06,2.93,1.03,0,">1 nonsynonymous","L5Q R136K",2
"lib1","SARS-CoV-2","TATTTAGTTAATAGAG",1,41.64,9.99,-0.77,0.07,2.86,1.03,0,">1 nonsynonymous","T46I T100K I142L F156V",4
"lib1","SARS-CoV-2","TATTTAGTTCTCGCGT",8,150.69,9.17,-1.59,0.1,2.12,1.13,0,">1 nonsynonymous","I104W Q176L",2
"lib1","SARS-CoV-2","TATTTAGTTGGTCTTT",1,64.4,10.62,-0.14,0.04,2.92,1.02,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","TATTTAGTTTCGCAAT",7,79.41,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10G L95E F99H N157S",4
"lib1","SARS-CoV-2","TATTTATAAAGTTTAT",2,9.57,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","D59L Y93Q P169F",3
"lib1","SARS-CoV-2","TATTTATACCGATTCC",3,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S W23H D90S I104Y",4
"lib1","SARS-CoV-2","TATTTATCATGAAGAA",2,28.01,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L38F K94L V103Y G117V I142K",5
"lib1","SARS-CoV-2","TATTTATCGCGCAAAA",2,378.44,10.19,-0.57,0.05,2.74,1.02,0,"1 nonsynonymous","W106M",1
"lib1","SARS-CoV-2","TATTTATGAACAAAGT",3,46.73,9.74,-1.02,0.11,2.63,1.05,0,">1 nonsynonymous","V37D P161G",2
"lib1","SARS-CoV-2","TATTTATTGTATCCAA",3,18.48,7.74,-3.02,0.37,1.5,1.12,0.07,">1 nonsynonymous","R25C E141Q",2
"lib1","SARS-CoV-2","TATTTCAAATGAGAAA",1,27.69,9.38,-1.39,0.09,2.75,1.1,0,">1 nonsynonymous","Q84V G117A",2
"lib1","SARS-CoV-2","TATTTCAACCCATTCA",5,87.34,10.65,-0.11,0.03,2.96,1,0,">1 nonsynonymous","D59E D98H G116P",3
"lib1","SARS-CoV-2","TATTTCAACCTGATAT",8,9.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34T V115N R124H",3
"lib1","SARS-CoV-2","TATTTCACAAAAACAA",4,87.45,10.6,-0.16,0.05,2.88,1.01,0,">1 nonsynonymous","A42C E154Q",2
"lib1","SARS-CoV-2","TATTTCACAAACTGAG",3,8.43,7.15,-3.61,0.13,1.93,1.05,0,">1 nonsynonymous","R16K N30L R73W L95D C150S",5
"lib1","SARS-CoV-2","TATTTCAGCGTAGTTA",1,41.35,10.21,-0.56,0.06,2.78,1,0,">1 nonsynonymous","N120G K128H Y178A",3
"lib1","SARS-CoV-2","TATTTCATTACACTAT",2,60.85,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L95M G146V C158L V173E",4
"lib1","SARS-CoV-2","TATTTCCAATCAAAAG",3,0.61,NA,NA,NA,NA,NA,NA,"stop","Y121F T170*",2
"lib1","SARS-CoV-2","TATTTCCCCACGTAAA",1,23.67,9.85,-0.92,0.11,2.01,1.03,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TATTTCCCTCTGACAG",1,8.52,9.19,-1.57,0.31,1.5,1.01,0.03,">1 nonsynonymous","L57N T63P E141S",3
"lib1","SARS-CoV-2","TATTTCCGGCTCTATT",9,95.5,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I2H E10K N64I N151S F167M",5
"lib1","SARS-CoV-2","TATTTCCGTATTCGAA",4,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G D112H",2
"lib1","SARS-CoV-2","TATTTCCGTCAGATAA",6,67.27,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W106V Y119D Y143K",3
"lib1","SARS-CoV-2","TATTTCGACTGCTAAC",3,32.38,9.37,-1.39,0.1,1.52,1.15,0.01,">1 nonsynonymous","I80M Q84W",2
"lib1","SARS-CoV-2","TATTTCGCAAGAGGAA",5,24.68,10.74,-0.03,0.08,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTTCGTTGAGATAT",2,96.21,10.76,0,0.06,2.91,1.03,0,">1 nonsynonymous","N1I Y35L T140F H189D",4
"lib1","SARS-CoV-2","TATTTCTAAAGCACAC",3,56.32,9.89,-0.88,0.08,2.63,1.05,0,">1 nonsynonymous","P7N S41V S53Y L57H V173C K198R",6
"lib1","SARS-CoV-2","TATTTCTAATAAAGCT",7,119.3,10.79,0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TATTTCTACACAACCA",1,32.03,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y50D N64S E141C",3
"lib1","SARS-CoV-2","TATTTCTATACCGTGT",10,91.39,10.01,-0.75,0.06,2.58,1.04,0,">1 nonsynonymous","V52H V173G",2
"lib1","SARS-CoV-2","TATTTCTATTCACATG",1,24.7,10.25,-0.52,0.18,1.92,1.02,0.01,">1 nonsynonymous","F44M D98F T148N",3
"lib1","SARS-CoV-2","TATTTCTCAATTCCAG",2,41.62,10.89,0.13,0.09,2.87,1.08,0,">1 nonsynonymous","K26V V173M",2
"lib1","SARS-CoV-2","TATTTCTGATTAAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S P169Q",2
"lib1","SARS-CoV-2","TATTTCTGTACTTGAA",7,9.97,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I2N C102H A145G",3
"lib1","SARS-CoV-2","TATTTCTGTGAATCAT",7,6.54,NA,NA,NA,NA,NA,NA,"stop","L5T Y35G V71I A81* D97A",5
"lib1","SARS-CoV-2","TATTTCTTACCAGTTA",1,23.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9A R124E",2
"lib1","SARS-CoV-2","TATTTCTTCAACGTAC",3,60.16,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D112N L122R R136N",3
"lib1","SARS-CoV-2","TATTTGAAAAGAACGG",5,36.59,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L60R W106L Y123F F156I Q168K",5
"lib1","SARS-CoV-2","TATTTGAACAAAAAAT",1,23.38,6,-4.76,2,1.5,1.1,0.07,">1 nonsynonymous","Y21K L95G Q168Y",3
"lib1","SARS-CoV-2","TATTTGAAGAAAACCA",3,37.31,9.73,-1.04,0.13,2.15,1,0.01,"1 nonsynonymous","D137H",1
"lib1","SARS-CoV-2","TATTTGACACTTGTGG",1,0.47,NA,NA,NA,NA,NA,NA,"stop","K87F I138*",2
"lib1","SARS-CoV-2","TATTTGATAGAGTGTA",1,19.72,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","S45D D59S G74T G101V",4
"lib1","SARS-CoV-2","TATTTGATATACATGC",6,1.16,NA,NA,NA,NA,NA,NA,"stop","S41* S53C Y66V Y93L Y175F",5
"lib1","SARS-CoV-2","TATTTGATTCGAGCCT",2,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107C E141G",2
"lib1","SARS-CoV-2","TATTTGCAGAGACGAA",2,1.48,NA,NA,NA,NA,NA,NA,"stop","Y39L F99V A105S Y119C G166* S200K",6
"lib1","SARS-CoV-2","TATTTGCCCATTTGTC",4,19.9,6.83,-3.94,0.39,1.5,1.08,0.05,">1 nonsynonymous","Q84H K87P W106R G117L N130G",5
"lib1","SARS-CoV-2","TATTTGCGCTCTTATA",6,0.47,NA,NA,NA,NA,NA,NA,"stop","A42K E141K E154R T201*",4
"lib1","SARS-CoV-2","TATTTGCTCAACATCC",1,10.7,11.02,0.25,0.29,2.85,1,0.02,"1 nonsynonymous","Y143W",1
"lib1","SARS-CoV-2","TATTTGCTCGGCGGCA",3,6.77,NA,NA,NA,NA,NA,NA,"stop","N1T S43* A145V",3
"lib1","SARS-CoV-2","TATTTGCTGCACGGCA",2,23.4,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G9V C61R G83L I138G F167L",5
"lib1","SARS-CoV-2","TATTTGCTGGATGAGC",5,43.12,8.75,-2.01,0.25,1.5,1.13,0.02,">1 nonsynonymous","G86S S139R",2
"lib1","SARS-CoV-2","TATTTGCTGTCCAATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C D98T T148R V180D",4
"lib1","SARS-CoV-2","TATTTGCTTACTTAAA",3,34.83,10.24,-0.53,0.08,2.82,1.1,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","TATTTGGAAGATACTG",4,20.5,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A105L G116H E154I G174Q",4
"lib1","SARS-CoV-2","TATTTGGAGACTGCGA",9,56.87,8.3,-2.46,0.27,1.5,1.23,0.03,">1 nonsynonymous","T3Y F12C A33Q",3
"lib1","SARS-CoV-2","TATTTGGTACCCAGGG",1,7.83,6,-4.76,2,1.5,1.35,0.07,">1 nonsynonymous","P7L P82T D112A",3
"lib1","SARS-CoV-2","TATTTGGTGTTCCAAT",4,69.7,10.63,-0.13,0.04,2.89,1.01,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","TATTTGTGATTAGTGT",4,16.23,6,-4.76,2,3,1.1,0,">1 nonsynonymous","I80M F99D",2
"lib1","SARS-CoV-2","TATTTGTTAAAGCACA",5,62.13,7.42,-3.34,0.23,1.5,1.17,0.02,">1 nonsynonymous","F62D Y121R",2
"lib1","SARS-CoV-2","TATTTGTTTACTACGT",3,15.59,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","G51V I80E P161N",3
"lib1","SARS-CoV-2","TATTTTAAAGAGCTAT",4,0.34,NA,NA,NA,NA,NA,NA,"stop","I88Y K114* K128Y G152R",4
"lib1","SARS-CoV-2","TATTTTAAATACTTCA",5,44.77,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F99T I104L",2
"lib1","SARS-CoV-2","TATTTTAACCACATCG",6,38.09,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I88Y Y93L N107F A145G",4
"lib1","SARS-CoV-2","TATTTTAACCAGATAC",5,29.01,6.06,-4.7,0.54,1.5,1.09,0.01,">1 nonsynonymous","G51V V65T T85V T201M",4
"lib1","SARS-CoV-2","TATTTTAATAAGACGA",5,70.93,6.3,-4.47,0.56,1.5,1.12,0.02,">1 nonsynonymous","S45P G86L S184T",3
"lib1","SARS-CoV-2","TATTTTACATACAACA",3,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R D137K Q176T",3
"lib1","SARS-CoV-2","TATTTTACCGTAGAAC",2,64.71,9.74,-1.02,0.06,2.8,1.06,0,">1 nonsynonymous","S113G S129L",2
"lib1","SARS-CoV-2","TATTTTACGAGCGGCA",1,31.74,10.45,-0.32,0.11,2.74,1.01,0,">1 nonsynonymous","C61E P96D",2
"lib1","SARS-CoV-2","TATTTTAGGCTAATCG",1,105.56,8.22,-2.54,0.18,2.12,1.13,0.01,">1 nonsynonymous","G83I Y175N",2
"lib1","SARS-CoV-2","TATTTTATTACACAAG",4,32.11,9.8,-0.96,0.12,1.98,1.03,0.01,">1 nonsynonymous","E10Y F62C E141F",3
"lib1","SARS-CoV-2","TATTTTATTTAACGAT",4,57.46,9.05,-1.72,0.17,1.76,1.17,0.01,">1 nonsynonymous","F12G C61V",2
"lib1","SARS-CoV-2","TATTTTCAATGGATTT",3,0,NA,NA,NA,NA,NA,NA,"stop","E10K V115*",2
"lib1","SARS-CoV-2","TATTTTCATGCTGGGA",2,31.69,9.51,-1.25,0.06,2.88,1.08,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","TATTTTCCAATGAAAG",5,18.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K87A L95R T100I A105F",4
"lib1","SARS-CoV-2","TATTTTCCAGACGTTA",2,8.64,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","A14G Y50S P96L V103T G166P",5
"lib1","SARS-CoV-2","TATTTTCCCCTCAAAA",1,24.55,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","Q144V Q176R K198F",3
"lib1","SARS-CoV-2","TATTTTCGCTAAACCA",8,42.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A K26M K87N I104A S113T P133N",6
"lib1","SARS-CoV-2","TATTTTCTCTTAAGGT",3,32.14,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36L Y50N T140S",3
"lib1","SARS-CoV-2","TATTTTGAAAATCTTG",1,20.86,9.62,-1.14,0.08,2.74,1.07,0,">1 nonsynonymous","Y39G A89S N120R F156Y",4
"lib1","SARS-CoV-2","TATTTTGAAACGAAAC",2,37.54,10.76,-0.01,0.08,2.91,1.06,0,">1 nonsynonymous","P54R Y178H",2
"lib1","SARS-CoV-2","TATTTTGAACATAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R V103F",2
"lib1","SARS-CoV-2","TATTTTGATGAACAAG",1,0.59,NA,NA,NA,NA,NA,NA,"stop","T55* D90V G116V E141R F167T",5
"lib1","SARS-CoV-2","TATTTTGCCCGATTTG",2,68.97,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39M L95W K128L F156A Y178F",5
"lib1","SARS-CoV-2","TATTTTGCCCGGCCAG",1,20.77,6.29,-4.47,1.02,1.5,1.33,0.05,">1 nonsynonymous","K48T K87N N120H R127E P133M I138R",6
"lib1","SARS-CoV-2","TATTTTGCCGTATGAT",4,27.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S43T V77P W106M E141K",4
"lib1","SARS-CoV-2","TATTTTGGACAAACCG",9,53.36,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37L D59A I80K L125S",4
"lib1","SARS-CoV-2","TATTTTGTAACGCTTA",3,14.55,10.74,-0.02,0.12,2.83,1.13,0.01,"1 nonsynonymous","I28L",1
"lib1","SARS-CoV-2","TATTTTGTACCCGGCC",10,236.62,10.69,-0.08,0.05,2.93,1.02,0,"1 nonsynonymous","G174N",1
"lib1","SARS-CoV-2","TATTTTGTTTTATACG",4,26.4,8.34,-2.43,0.16,1.5,1.09,0.02,">1 nonsynonymous","N40T C49L",2
"lib1","SARS-CoV-2","TATTTTTAAGTATAAA",5,23.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102W K114Q S139I",3
"lib1","SARS-CoV-2","TATTTTTAATACTTAA",2,6.98,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A81Y T85A L162P",3
"lib1","SARS-CoV-2","TATTTTTAGTTTCTTG",4,46.59,9.25,-1.52,0.09,2.69,1.23,0,"1 nonsynonymous","Y119P",1
"lib1","SARS-CoV-2","TATTTTTATAAATAGA",1,11.05,10.36,-0.4,0.14,2.81,1.03,0.01,">1 nonsynonymous","N1D D98V",2
"lib1","SARS-CoV-2","TATTTTTATCCAGTAA",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P F99V Y119V N151D",4
"lib1","SARS-CoV-2","TATTTTTCACAGCGGA",4,1.59,NA,NA,NA,NA,NA,NA,"stop","G51Q L57* P197S T201R",4
"lib1","SARS-CoV-2","TATTTTTCCAGAAACA",7,4.57,NA,NA,NA,NA,NA,NA,"stop","Y91* Y119Q G146I",3
"lib1","SARS-CoV-2","TATTTTTGATTAATGG",1,24.4,10.69,-0.08,0.06,2.93,1.01,0,">1 nonsynonymous","E10K P149S",2
"lib1","SARS-CoV-2","TATTTTTTAACATGCT",3,106.65,10.25,-0.51,0.27,1.5,1,0.03,">1 nonsynonymous","I2H P96D S139L Y175G",4
"lib1","SARS-CoV-2","TATTTTTTCTACAACT",3,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21M T55W F70R N107P N118P",5
"lib1","SARS-CoV-2","TCAAAAAACAAGAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12A N24* C150S",3
"lib1","SARS-CoV-2","TCAAAAAACATTGAGA",1,8.82,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T100D G152L R179M",3
"lib1","SARS-CoV-2","TCAAAAAAGCCAATAT",3,1.41,NA,NA,NA,NA,NA,NA,"stop","C61* I142R",2
"lib1","SARS-CoV-2","TCAAAAAAGTAAAAAC",4,123.11,10.21,-0.55,0.07,2.68,1.02,0,"1 nonsynonymous","D34W",1
"lib1","SARS-CoV-2","TCAAAAAAGTTAATTA",2,32.76,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","L38N A81N G174M",3
"lib1","SARS-CoV-2","TCAAAAAATAGAGTTG",5,57.96,9.46,-1.3,0.09,2.66,1.07,0,">1 nonsynonymous","F99L N120V F156P P197L",4
"lib1","SARS-CoV-2","TCAAAAAATTAACATC",6,100.16,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y91I F99N",2
"lib1","SARS-CoV-2","TCAAAAACAAACAAGC",4,39.42,6,-4.76,2,3,1.19,0,">1 nonsynonymous","R16N D68K D90T K114Q L122S F156G",6
"lib1","SARS-CoV-2","TCAAAAACAAGCCAGA",1,15.8,9.77,-1,0.06,2.94,1.01,0,">1 nonsynonymous","L5N T170F A190F",3
"lib1","SARS-CoV-2","TCAAAAACACATAAGC",2,10.89,7.32,-3.44,0.36,1.89,1.18,0.03,">1 nonsynonymous","Y35I N107P R136E P197L",4
"lib1","SARS-CoV-2","TCAAAAACCAGTCGAT",1,1.38,NA,NA,NA,NA,NA,NA,"stop","S36* C61G Q144Y",3
"lib1","SARS-CoV-2","TCAAAAACCTATTAAA",4,75.61,10.3,-0.47,0.06,2.89,1.03,0,">1 nonsynonymous","T15V V32A",2
"lib1","SARS-CoV-2","TCAAAAACTCTATCTT",1,72.02,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","E10H S19K D98M I104Y S113V Y119L Y178N P197Y",8
"lib1","SARS-CoV-2","TCAAAAACTGACACAC",5,60.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61D F167P",2
"lib1","SARS-CoV-2","TCAAAAACTGGAAATA",16,335.93,9.83,-0.93,0.04,2.86,1.07,0,">1 nonsynonymous","R73A T201H",2
"lib1","SARS-CoV-2","TCAAAAAGAACAAATG",3,33.39,6,-4.76,1.06,1.5,1.18,0.01,">1 nonsynonymous","L60N Y93H",2
"lib1","SARS-CoV-2","TCAAAAAGAATATAGC",1,28.81,10.58,-0.19,0.08,2.9,1.09,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","TCAAAAAGAGTGCACA",5,11.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42I K48H K56G D68K P82I R127D",6
"lib1","SARS-CoV-2","TCAAAAAGGCGAACTG",1,50,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","V37K V52G L60E V77I N92D G117D F134K T170N K198A",9
"lib1","SARS-CoV-2","TCAAAAAGGGGCTTCC",3,74.5,9.73,-1.03,0.12,1.98,1.1,0,">1 nonsynonymous","P96T G152H",2
"lib1","SARS-CoV-2","TCAAAAAGTAATAAGT",4,36.26,10.79,0.02,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAAAAGTCAAAAAG",3,22.99,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V71L D90H G117S I138C G166S",5
"lib1","SARS-CoV-2","TCAAAAATACGTAAAA",8,2.36,NA,NA,NA,NA,NA,NA,"stop","N13S C49G C61* G117S Q168F",5
"lib1","SARS-CoV-2","TCAAAAATCAGAAATC",2,43.52,10.8,0.04,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAAAAATTGTACGAA",5,49.31,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49L G86F Q176M",3
"lib1","SARS-CoV-2","TCAAAACAAAAGATCC",9,34.86,9.59,-1.18,0.18,2.01,1.07,0.01,">1 nonsynonymous","T46S P82I K198G",3
"lib1","SARS-CoV-2","TCAAAACAACGCTAGG",1,33.73,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S45P K87G Q176L",3
"lib1","SARS-CoV-2","TCAAAACAAGATCCAA",1,9.1,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","V71N P82R K114Q Y121S E154P N171F S200K",7
"lib1","SARS-CoV-2","TCAAAACAATATCAGC",4,55.99,9.71,-1.06,0.08,2.18,1.03,0,">1 nonsynonymous","N64I S139C P149N E154Q",4
"lib1","SARS-CoV-2","TCAAAACACGAAGTAT",2,29.73,10.71,-0.06,0.1,2.9,1.06,0.01,"1 nonsynonymous","K128E",1
"lib1","SARS-CoV-2","TCAAAACAGAAACAAA",1,6.15,10.56,-0.21,0.11,3,1,0,">1 nonsynonymous","C61T K132T",2
"lib1","SARS-CoV-2","TCAAAACAGGAAAAGA",4,27.58,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6I D90R I142H Y175K",4
"lib1","SARS-CoV-2","TCAAAACAGTACAATC",3,40.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3G L60K A81K I88S F99I A145S C150A V173N Q176L",9
"lib1","SARS-CoV-2","TCAAAACATATAAGGG",5,101.18,7.45,-3.31,0.13,1.63,1.14,0.01,">1 nonsynonymous","S29F C61T D97T Y175R",4
"lib1","SARS-CoV-2","TCAAAACATTAGAAAA",1,7.11,6,-4.76,2,1.5,1.22,0.06,"1 nonsynonymous","G101R",1
"lib1","SARS-CoV-2","TCAAAACCAAGAAAAG",4,25.24,6,-4.76,2,3,1.15,0,">1 nonsynonymous","C6K A67G V115Y S129Y K198H",5
"lib1","SARS-CoV-2","TCAAAACCACCACTGA",2,57.54,10.67,-0.09,0.09,2.84,1.12,0,"1 nonsynonymous","K114R",1
"lib1","SARS-CoV-2","TCAAAACCAGCTTAAG",2,1.08,NA,NA,NA,NA,NA,NA,"stop","C49Y P54R C61* K199Y",4
"lib1","SARS-CoV-2","TCAAAACCATAAGCGG",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79V D112T Q144S N151W",4
"lib1","SARS-CoV-2","TCAAAACCATGGAGGT",3,28.6,10.54,-0.23,0.1,2.9,1.1,0.01,"1 nonsynonymous","T46R",1
"lib1","SARS-CoV-2","TCAAAACCGAACAAAT",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V R136G T201S",3
"lib1","SARS-CoV-2","TCAAAACCTCTAAACA",3,45.5,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I104N Q163F G174L",3
"lib1","SARS-CoV-2","TCAAAACGAGCGGACG",2,25.49,6,-4.76,1.17,3,1.2,0.01,">1 nonsynonymous","S19L S43V V71C P149F",4
"lib1","SARS-CoV-2","TCAAAACGATCATTAG",1,7.92,10.73,-0.04,0.05,2.97,1,0,">1 nonsynonymous","T55F I104F",2
"lib1","SARS-CoV-2","TCAAAACGGCATCAAA",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72C A89E E135R K199M",4
"lib1","SARS-CoV-2","TCAAAACGTGACTTTT",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T T55S R179C",3
"lib1","SARS-CoV-2","TCAAAACTAAAACTCA",5,61.1,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","I88R W106R C195T",3
"lib1","SARS-CoV-2","TCAAAACTAGTAGCTA",1,48.99,8.64,-2.13,0.23,1.78,1.25,0.02,">1 nonsynonymous","Y123R Y178E",2
"lib1","SARS-CoV-2","TCAAAACTCAACAAGC",1,20.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56H V103L G174M K198R",4
"lib1","SARS-CoV-2","TCAAAACTCAATAAGA",6,48.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6P F17K S200F",3
"lib1","SARS-CoV-2","TCAAAACTGAAACCGA",9,201.71,10.74,-0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAAACTTATAAAGG",3,27.84,6,-4.76,1.62,1.5,1.15,0.01,">1 nonsynonymous","R127P S164I",2
"lib1","SARS-CoV-2","TCAAAACTTCTGGCAG",7,60.08,9.95,-0.82,0.11,1.9,1.06,0,"1 nonsynonymous","C49Y",1
"lib1","SARS-CoV-2","TCAAAAGAAAATTACG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","R25K Y93N D98E L122*",4
"lib1","SARS-CoV-2","TCAAAAGAGAAAGAGG",1,58.42,10.71,-0.05,0.05,2.9,1.09,0,">1 nonsynonymous","K56H E141S",2
"lib1","SARS-CoV-2","TCAAAAGAGAGTAAAA",4,91.3,9.86,-0.9,0.09,2.37,1.05,0,">1 nonsynonymous","A14F K26T D97E S200N",4
"lib1","SARS-CoV-2","TCAAAAGATTAGTTAT",1,13.16,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N24R Y39K T55D I72R G86L D98F W106M L125V",8
"lib1","SARS-CoV-2","TCAAAAGCATACTAAT",3,43.7,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G83I N107T F160E T170K",4
"lib1","SARS-CoV-2","TCAAAAGCCTTGCTAA",6,116.41,10.74,-0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAAAGCGACTTTAG",9,146.9,9.12,-1.64,0.15,1.55,1.15,0.01,">1 nonsynonymous","V37L G86L D90R T100L",4
"lib1","SARS-CoV-2","TCAAAAGCTATAGTGT",1,16.89,10.23,-0.53,0.08,2.86,1.12,0.01,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","TCAAAAGCTCCACGAG",5,63.55,10.5,-0.26,0.05,2.88,1.02,0,">1 nonsynonymous","F62E T201S",2
"lib1","SARS-CoV-2","TCAAAAGGAAACCCAG",2,11.95,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","K26G A105R",2
"lib1","SARS-CoV-2","TCAAAAGTCGTCAGTA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N A33S T46S K132R T148A F160R",6
"lib1","SARS-CoV-2","TCAAAAGTGTCACAAC",2,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H T15K D34T N130S",4
"lib1","SARS-CoV-2","TCAAAAGTTACACCTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","V71E S113*",2
"lib1","SARS-CoV-2","TCAAAAGTTACTATGC",1,23.82,6.33,-4.43,0.57,1.5,1.17,0.03,">1 nonsynonymous","N4T P82Q F134C",3
"lib1","SARS-CoV-2","TCAAAAGTTTTAAAGC",4,59.72,10.9,0.13,0.06,2.93,1.03,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TCAAAATAAGGCCCTG",5,89.76,10.58,-0.19,0.04,2.92,1.01,0,">1 nonsynonymous","A42E N64L I138N",3
"lib1","SARS-CoV-2","TCAAAATAAGTATTAT",3,13.3,6.1,-4.66,1.79,1.5,1.22,0.06,">1 nonsynonymous","F44G P149L Y175R",3
"lib1","SARS-CoV-2","TCAAAATAATAAAAAC",4,62.51,9.34,-1.42,0.08,2.71,1.12,0,">1 nonsynonymous","N120L G146W F156P",3
"lib1","SARS-CoV-2","TCAAAATACAATGAGT",9,134.74,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V11S R25C",2
"lib1","SARS-CoV-2","TCAAAATAGAGAAACA",5,28.49,6.52,-4.25,0.49,1.5,1.15,0.02,">1 nonsynonymous","S45T N92T N107M R127Y T201L",5
"lib1","SARS-CoV-2","TCAAAATATATATACA",2,13.81,6.65,-4.11,0.55,1.5,1.17,0.05,">1 nonsynonymous","K26V A42P V71N R127V G146A",5
"lib1","SARS-CoV-2","TCAAAATATGCATCTT",1,12.49,10.01,-0.75,0.14,2.6,1.07,0.02,">1 nonsynonymous","A14V E141R T201M",3
"lib1","SARS-CoV-2","TCAAAATATTAACCAT",3,11.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10I Y93W S139H",3
"lib1","SARS-CoV-2","TCAAAATCAAATGAAC",1,16.72,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","P54G K94L S113V F156L Q168L",5
"lib1","SARS-CoV-2","TCAAAATCGGGTTCTA",2,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D I88G G196A",3
"lib1","SARS-CoV-2","TCAAAATGAAGGATAT",1,100.64,10.78,0.01,0.06,2.92,1.03,0,"1 nonsynonymous","V37R",1
"lib1","SARS-CoV-2","TCAAAATGCCTCTACC",1,17.56,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V20G R78Q K87T Y119S G155C",5
"lib1","SARS-CoV-2","TCAAAATGTAAAGAGA",7,55.26,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","V37W K56R I88K Y119L",4
"lib1","SARS-CoV-2","TCAAAATTATTTAGTT",1,25.33,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","V37F D59L G86F L122C V173T",5
"lib1","SARS-CoV-2","TCAAAATTCCCGCGCA",8,1.91,NA,NA,NA,NA,NA,NA,"stop","W106* F134G",2
"lib1","SARS-CoV-2","TCAAAATTGCTTTAGC",5,38.56,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35R D59Q N118D G172V",4
"lib1","SARS-CoV-2","TCAAAATTGTCAACTG",10,102.99,10.75,-0.02,0.04,2.97,1.02,0,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","TCAAAATTTTAGCAGT",6,94.52,10.86,0.1,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAACAACAGAAAGC",1,43.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12I V32S N107I F167L",4
"lib1","SARS-CoV-2","TCAAACAACGAACTTT",1,12.81,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C6D V65A L95H V115G",4
"lib1","SARS-CoV-2","TCAAACAACGAGGCTA",1,3.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40T",1
"lib1","SARS-CoV-2","TCAAACAATAATGGCT",2,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I D112G Y119G N157I",4
"lib1","SARS-CoV-2","TCAAACACACACCAAC",1,23.7,6,-4.76,2,1.5,1.17,0.06,">1 nonsynonymous","V52D Y123V P177Y",3
"lib1","SARS-CoV-2","TCAAACACAGCGAAAA",1,59,10.76,0,0.06,2.91,1.05,0,">1 nonsynonymous","T55N G152S",2
"lib1","SARS-CoV-2","TCAAACACAGTCCGTA",3,6.19,6.72,-4.04,0.23,1.87,1.11,0.01,">1 nonsynonymous","A33M L95R",2
"lib1","SARS-CoV-2","TCAAACACAGTCGGGT",4,48.27,10.81,0.05,0.07,2.94,1.04,0,"1 nonsynonymous","L5E",1
"lib1","SARS-CoV-2","TCAAACACGGGACCTG",7,69.93,10.47,-0.29,0.03,2.96,1.01,0,">1 nonsynonymous","T100L F156A",2
"lib1","SARS-CoV-2","TCAAACACTATGATCC",6,3.99,NA,NA,NA,NA,NA,NA,"stop","S53M Y165* G196R",3
"lib1","SARS-CoV-2","TCAAACACTGTCTACA",3,5.72,6,-4.76,2,1.5,1.14,0.07,">1 nonsynonymous","W106P S129I",2
"lib1","SARS-CoV-2","TCAAACAGAAAAACTA",3,13.19,10.85,0.09,0.1,2.95,1,0,">1 nonsynonymous","T55H S139T",2
"lib1","SARS-CoV-2","TCAAACAGAAAACAAT",3,21.76,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","G9H R25L G51F D68M G86S W106G Y119M L125P",8
"lib1","SARS-CoV-2","TCAAACAGCATGTATA",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38H F62I F99M K132R N151Y",5
"lib1","SARS-CoV-2","TCAAACATACAGTGTT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","T3L S69H G83S K94* E141G",5
"lib1","SARS-CoV-2","TCAAACATACCTTTGA",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F V103N S129C A145D",4
"lib1","SARS-CoV-2","TCAAACATAGATGATA",1,37.96,10.65,-0.12,0.05,2.94,1,0,"1 nonsynonymous","T15R",1
"lib1","SARS-CoV-2","TCAAACATATCTTCGT",7,38.55,10.86,0.1,0.08,2.91,1.05,0,">1 nonsynonymous","R16M S129K",2
"lib1","SARS-CoV-2","TCAAACATCCAATACT",2,7.99,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N110Y Y119S A145D L162A P197T",5
"lib1","SARS-CoV-2","TCAAACATGATCTGTA",9,58.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7Y A14K C61G P82I Y119W",5
"lib1","SARS-CoV-2","TCAAACATGTAAGTAT",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y G83I K114S T170L Q176C",5
"lib1","SARS-CoV-2","TCAAACATGTGGGAAT",9,99.65,10.73,-0.03,0.05,2.93,1.05,0,"1 nonsynonymous","S41E",1
"lib1","SARS-CoV-2","TCAAACCACTGAATCA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","G9K K94T E135*",3
"lib1","SARS-CoV-2","TCAAACCAGTGAAAAA",7,158.85,9.3,-1.46,0.06,2.83,1.11,0,"1 nonsynonymous","G166I",1
"lib1","SARS-CoV-2","TCAAACCATTAGATAT",4,97.93,9.67,-1.09,0.12,2.08,1.09,0.01,"1 nonsynonymous","F8G",1
"lib1","SARS-CoV-2","TCAAACCCAAGTAGAG",13,140.04,10.06,-0.7,0.06,2.73,1,0,">1 nonsynonymous","L5D F44L G83Q",3
"lib1","SARS-CoV-2","TCAAACCCAATAACCA",15,180.17,10.8,0.04,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAACCCATAATCAA",6,13.75,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D98E G101K N107L T201S",4
"lib1","SARS-CoV-2","TCAAACCCTAAGCAAC",2,110.86,10.77,0,0.08,2.88,1.09,0,">1 nonsynonymous","T63M T148D Q163V",3
"lib1","SARS-CoV-2","TCAAACCGTACGCCCT",10,242.1,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9W S45L D75N C150G Y165H",5
"lib1","SARS-CoV-2","TCAAACCTACTACGAA",2,21.65,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3M N58A A81Y S139R",4
"lib1","SARS-CoV-2","TCAAACCTATCAAGAA",3,35.52,10.54,-0.22,0.06,2.98,1,0,">1 nonsynonymous","I2G A145T",2
"lib1","SARS-CoV-2","TCAAACCTTGACTAGT",3,13.8,10.28,-0.48,0.08,2.9,1.07,0,">1 nonsynonymous","D98P S129C",2
"lib1","SARS-CoV-2","TCAAACGAAACGTTAA",5,0.95,NA,NA,NA,NA,NA,NA,"stop","A14I G166R G174*",3
"lib1","SARS-CoV-2","TCAAACGACTCAGAAG",1,10.88,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R27V V103M L131E",3
"lib1","SARS-CoV-2","TCAAACGAGATGGGCA",2,43.37,6.59,-4.17,0.51,1.5,1.09,0.04,">1 nonsynonymous","G9L Y35I Y93V A105M Q168P",5
"lib1","SARS-CoV-2","TCAAACGCAAACGAAG",11,171.55,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C158V T170R P177A",3
"lib1","SARS-CoV-2","TCAAACGCCTCTCGCG",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97C G155N V180R",3
"lib1","SARS-CoV-2","TCAAACGCTAACAAAG",7,47.66,6,-4.76,1.04,1.5,1.1,0.01,">1 nonsynonymous","K26R A89C F99N P149L G174A",5
"lib1","SARS-CoV-2","TCAAACGTAAAGTTCA",1,12.25,10.61,-0.16,0.14,2.8,1,0.01,"1 nonsynonymous","S147M",1
"lib1","SARS-CoV-2","TCAAACGTAACGCACA",4,1.07,NA,NA,NA,NA,NA,NA,"stop","L38* F44T D97E",3
"lib1","SARS-CoV-2","TCAAACGTCATTCAAA",10,104.25,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","W23V F62P K87M K128M E154I",5
"lib1","SARS-CoV-2","TCAAACTATAAGGCTA",3,18.11,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A14V L57C N64L A89I N130C",5
"lib1","SARS-CoV-2","TCAAACTATTGACGAT",4,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53G A89M D97N",3
"lib1","SARS-CoV-2","TCAAACTCAATTCAAA",2,43.55,10.06,-0.7,0.06,2.85,1.04,0,"1 nonsynonymous","C6V",1
"lib1","SARS-CoV-2","TCAAACTCATAAGTAG",3,410.83,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D90C Y119C Q144L G152K",4
"lib1","SARS-CoV-2","TCAAACTCATCTAACA",4,11.21,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y50M D90F",2
"lib1","SARS-CoV-2","TCAAACTGGCAAGTGC",3,16.66,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","L95P N120D P149G",3
"lib1","SARS-CoV-2","TCAAACTGTTCTACAA",3,48.07,9.82,-0.94,0.09,2.6,1.02,0,">1 nonsynonymous","N1H Y35A I142Y",3
"lib1","SARS-CoV-2","TCAAACTTCCCTATTT",1,0.76,NA,NA,NA,NA,NA,NA,"stop","N24P V37* L60R F126T",4
"lib1","SARS-CoV-2","TCAAAGAACAAATAAT",4,38.55,10.36,-0.41,0.07,2.79,1.01,0,">1 nonsynonymous","D90Y P149N",2
"lib1","SARS-CoV-2","TCAAAGACAACCGTAA",4,0.57,NA,NA,NA,NA,NA,NA,"stop","K94N N107P S113*",3
"lib1","SARS-CoV-2","TCAAAGACAACTCGGC",2,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E F12K I104Q Y165V",4
"lib1","SARS-CoV-2","TCAAAGACATGCACTC",9,116.54,9.49,-1.27,0.04,2.86,1.09,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","TCAAAGACGCAACGAT",4,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S A14P G51S F99T P133L P161Y Y175S",7
"lib1","SARS-CoV-2","TCAAAGAGACAGCATG",3,41.83,9.25,-1.51,0.11,2.79,1.16,0.01,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","TCAAAGAGACTTCAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A N107S",2
"lib1","SARS-CoV-2","TCAAAGAGAGGCCTCT",8,80.09,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y93R N107R",2
"lib1","SARS-CoV-2","TCAAAGAGGAAAAATT",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G T15V S113L Y121N",4
"lib1","SARS-CoV-2","TCAAAGAGTTCTGGGT",1,49.51,10.29,-0.47,0.06,2.83,1,0,">1 nonsynonymous","Y35S K114R K198T",3
"lib1","SARS-CoV-2","TCAAAGATCTCTGAAT",1,2.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50F",1
"lib1","SARS-CoV-2","TCAAAGATGCGACAAC",4,1.64,NA,NA,NA,NA,NA,NA,"stop","F17R Y35T K94Q S113* N120L",5
"lib1","SARS-CoV-2","TCAAAGATGTATGAAT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","S41F T46L D59R E135* F160I",5
"lib1","SARS-CoV-2","TCAAAGATTATACAAT",3,29.59,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35N A89D V103L",3
"lib1","SARS-CoV-2","TCAAAGCAACTAGAAG",1,5.36,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","R16K D90A C158N",3
"lib1","SARS-CoV-2","TCAAAGCAAGTGCCAC",1,8.17,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V11S A105P Q163V P169I",4
"lib1","SARS-CoV-2","TCAAAGCCAGCCAGAT",3,18.2,9.68,-1.09,0.21,1.84,1.21,0.02,">1 nonsynonymous","N1C T15G L60Y G116R",4
"lib1","SARS-CoV-2","TCAAAGCCTAATTTTT",5,142.68,9.81,-0.96,0.1,2.19,1.03,0,">1 nonsynonymous","V77A K114A",2
"lib1","SARS-CoV-2","TCAAAGCGCTAAGAAC",2,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M D68E V182G",3
"lib1","SARS-CoV-2","TCAAAGCTATTTCCAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","A18* P82K K94P F99P V103*",5
"lib1","SARS-CoV-2","TCAAAGCTGACCTGTC",5,55.96,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C102F Y119C N157V",3
"lib1","SARS-CoV-2","TCAAAGGAGTGATGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A Y91E",2
"lib1","SARS-CoV-2","TCAAAGGCGCACCTGT",1,54.08,9.51,-1.25,0.15,1.82,1.18,0.01,">1 nonsynonymous","V37Y V173T",2
"lib1","SARS-CoV-2","TCAAAGGCTGAAAGAA",1,13.22,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I72W S113W",2
"lib1","SARS-CoV-2","TCAAAGGGTGATACAA",1,11.74,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A14T V77S K132Y",3
"lib1","SARS-CoV-2","TCAAAGGTCTCACCCT",4,1.51,NA,NA,NA,NA,NA,NA,"stop","K56R N107* N120Q",3
"lib1","SARS-CoV-2","TCAAAGGTTTGGGTTT",7,68.81,10.1,-0.66,0.1,2.28,1.02,0,"1 nonsynonymous","E76Y",1
"lib1","SARS-CoV-2","TCAAAGTACTACAGAC",14,95.73,9.47,-1.29,0.08,2.74,1.08,0,">1 nonsynonymous","C61N K87Q W106F G146S T201P",5
"lib1","SARS-CoV-2","TCAAAGTATACTTATT",4,20.97,8.54,-2.22,0.33,1.5,1,0.04,">1 nonsynonymous","I28R K48H",2
"lib1","SARS-CoV-2","TCAAAGTATGAAACCG",3,10.95,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A42S D112W L122S E141I",4
"lib1","SARS-CoV-2","TCAAAGTCAAACTAAT",4,1.03,NA,NA,NA,NA,NA,NA,"stop","T100* D112K",2
"lib1","SARS-CoV-2","TCAAAGTCTCGCAGCG",2,7.32,9.28,-1.49,0.41,1.5,1.03,0.05,">1 nonsynonymous","N13D N58M S139V",3
"lib1","SARS-CoV-2","TCAAAGTGAGGCCACT",8,29.4,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F17T C102S",2
"lib1","SARS-CoV-2","TCAAAGTGCAAGAACC",11,115.12,9.55,-1.21,0.12,1.68,1.13,0.01,">1 nonsynonymous","T55A D68M",2
"lib1","SARS-CoV-2","TCAAAGTGGGAAATAT",25,260.12,10.06,-0.7,0.07,2.51,1.03,0,">1 nonsynonymous","L57K C195W",2
"lib1","SARS-CoV-2","TCAAAGTGTTGATTAC",1,77.31,10.49,-0.27,0.04,2.92,1.04,0,">1 nonsynonymous","L5S G155M",2
"lib1","SARS-CoV-2","TCAAAGTTCATACTGT",6,38.35,7.02,-3.75,0.36,1.5,1.09,0.04,">1 nonsynonymous","T3G V11C N58Y G83N Y123R",5
"lib1","SARS-CoV-2","TCAAAGTTTGATACAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35G L57S D68Q I138*",4
"lib1","SARS-CoV-2","TCAAATAACGTCATAA",1,18.8,8.41,-2.36,0.12,2.25,1.13,0.01,">1 nonsynonymous","D112T L122G",2
"lib1","SARS-CoV-2","TCAAATAATAGGTCAT",1,26.89,9.44,-1.32,0.35,1.5,1,0.06,">1 nonsynonymous","V103N D137W Y165H V173K P197E",5
"lib1","SARS-CoV-2","TCAAATACACACAAGG",11,3.77,NA,NA,NA,NA,NA,NA,"stop","Q84Y N107* Q168P",3
"lib1","SARS-CoV-2","TCAAATACCACAGCGA",6,40.72,9.5,-1.26,0.15,1.72,1.09,0.01,">1 nonsynonymous","K26W D34V",2
"lib1","SARS-CoV-2","TCAAATACCTACAATA",2,1,NA,NA,NA,NA,NA,NA,"stop","A18C G86M I104Y Y121*",4
"lib1","SARS-CoV-2","TCAAATACTGTTAGAT",11,76.67,10.73,-0.03,0.08,2.89,1.06,0,">1 nonsynonymous","V37S P191K",2
"lib1","SARS-CoV-2","TCAAATACTTGCAGGA",13,181.28,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37R K94L V115T L122S S129L P169I",6
"lib1","SARS-CoV-2","TCAAATAGGTGGATTG",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M T100Y D112G",3
"lib1","SARS-CoV-2","TCAAATATACGATCCA",5,11.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102K I138K",2
"lib1","SARS-CoV-2","TCAAATATCAGTGCTA",11,72.97,10.02,-0.74,0.09,2.76,1.03,0,"1 nonsynonymous","C6M",1
"lib1","SARS-CoV-2","TCAAATATGAGTAGGC",6,47.22,6.05,-4.71,1.19,1.5,1.21,0.03,">1 nonsynonymous","A14Q V77F N157Q",3
"lib1","SARS-CoV-2","TCAAATATTTAATAGA",5,54.08,10.86,0.1,0.06,2.89,1.06,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","TCAAATCAACCTTAGG",10,2.39,NA,NA,NA,NA,NA,NA,"stop","E10M I80L T85M G101* N120I",5
"lib1","SARS-CoV-2","TCAAATCAATTTAGTT",7,29.74,6.28,-4.49,1.19,1.5,1.32,0.07,">1 nonsynonymous","C49F G83V G86D",3
"lib1","SARS-CoV-2","TCAAATCACATCCCGC",3,13.2,6.04,-4.72,0.97,1.5,1.2,0.02,">1 nonsynonymous","T85V I104G S108P Y121N G146L C195G",6
"lib1","SARS-CoV-2","TCAAATCACTACATGA",3,53.94,10.73,-0.04,0.11,2.81,1.03,0,"1 nonsynonymous","F126L",1
"lib1","SARS-CoV-2","TCAAATCATATGTTAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106M V153D F156V Q176R S184A",5
"lib1","SARS-CoV-2","TCAAATCATTGAGGGC",14,74.97,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C6E I80M G86H V103L P161Y",5
"lib1","SARS-CoV-2","TCAAATCCATTCAATC",1,26.54,9.16,-1.61,0.08,2.78,1.2,0,">1 nonsynonymous","I2R Y39N G166T",3
"lib1","SARS-CoV-2","TCAAATCCCTTGTGAA",3,27.8,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","D97T D112A P133Y",3
"lib1","SARS-CoV-2","TCAAATCCGGCATATT",8,297.17,10.68,-0.09,0.04,2.89,1.03,0,">1 nonsynonymous","T15S K56V",2
"lib1","SARS-CoV-2","TCAAATCCTAATCTCC",3,47.76,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","I2Q K26V D90I S108L",4
"lib1","SARS-CoV-2","TCAAATCCTACAACGT",6,110.92,10.19,-0.57,0.07,2.55,1.02,0,">1 nonsynonymous","D59T P96T L122A T201K",4
"lib1","SARS-CoV-2","TCAAATCGAAAATAAT",1,10.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99L G116Q R136S",3
"lib1","SARS-CoV-2","TCAAATCGACACCAGA",1,15.43,7.81,-2.96,0.46,1.5,1,0.08,">1 nonsynonymous","P7Y N92F N157R",3
"lib1","SARS-CoV-2","TCAAATCGATTATTGA",3,8.08,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","A14Y S41L G101D",3
"lib1","SARS-CoV-2","TCAAATCTAAGAACTG",4,24.57,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S19V G172R",2
"lib1","SARS-CoV-2","TCAAATCTCCGGCCAT",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* G74M L122H G172L",4
"lib1","SARS-CoV-2","TCAAATCTGAAAATAA",1,5.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K94L T140L G166A",3
"lib1","SARS-CoV-2","TCAAATCTTCAATAAT",2,6.57,10.97,0.21,0.37,1.93,1,0.04,">1 nonsynonymous","I2T T15L A33D P54Y F160T",5
"lib1","SARS-CoV-2","TCAAATGAAACTGACG",2,44.82,10.2,-0.56,0.06,2.79,1.05,0,">1 nonsynonymous","F44S D59S K114I T201Y",4
"lib1","SARS-CoV-2","TCAAATGAACCAAAAG",8,81.01,6,-4.76,2,3,1.19,0,">1 nonsynonymous","V77G G86I E141R N151V V173Y",5
"lib1","SARS-CoV-2","TCAAATGACCGCTAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","V20G D98I A105*",3
"lib1","SARS-CoV-2","TCAAATGACTGGTCAT",3,21.11,6.07,-4.7,0.59,1.5,1.04,0.01,">1 nonsynonymous","D68I P149Q G174I",3
"lib1","SARS-CoV-2","TCAAATGATTAATTGT",2,13.02,10.19,-0.57,0.12,2.69,1.02,0.01,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","TCAAATGCTAACTATC",3,21.76,10.02,-0.74,0.11,2.16,1.06,0.01,">1 nonsynonymous","C102V K128S T201W",3
"lib1","SARS-CoV-2","TCAAATGGAGGACAAG",1,13.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8V V103S",2
"lib1","SARS-CoV-2","TCAAATGGCGTGACCC",1,27.55,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","F12S D90Y Y123T I138P N151K",5
"lib1","SARS-CoV-2","TCAAATGTACTCTTAG",1,21.6,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","T63L S69G A81F K128T",4
"lib1","SARS-CoV-2","TCAAATTAAAATTAGT",1,21.22,10.52,-0.25,0.09,2.89,1.04,0,">1 nonsynonymous","T3L Y175F",2
"lib1","SARS-CoV-2","TCAAATTAACTAAAAC",2,17.81,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F12V V65S A81I D97M L131P G152T",6
"lib1","SARS-CoV-2","TCAAATTACAATTCCC",5,40.38,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G101E K114A",2
"lib1","SARS-CoV-2","TCAAATTACCCACACA",7,59.27,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","L122H G172V S184L",3
"lib1","SARS-CoV-2","TCAAATTACCCTGTCA",6,28.02,6.01,-4.75,0.9,1.5,1.18,0.02,">1 nonsynonymous","I2T D34L L38F F99A",4
"lib1","SARS-CoV-2","TCAAATTAGAAAGTTA",4,27.18,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","G86P S113I K132V",3
"lib1","SARS-CoV-2","TCAAATTAGGACGATT",3,23.04,6,-4.76,1.19,1.5,1.18,0.02,">1 nonsynonymous","N64C N92L L125V P133Y P149Q",5
"lib1","SARS-CoV-2","TCAAATTATAGCATGG",7,38.1,6,-4.76,2,1.82,1.23,0.01,">1 nonsynonymous","I28T R73L E154S",3
"lib1","SARS-CoV-2","TCAAATTGAAATGAAC",3,12.32,6.01,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y91C T100Q W106M G116R Y123N A190S",6
"lib1","SARS-CoV-2","TCAAATTGACGAATGT",3,87.61,9.79,-0.97,0.09,2.08,1.08,0,"1 nonsynonymous","F17S",1
"lib1","SARS-CoV-2","TCAAATTGGATACACA",1,24.75,10.82,0.06,0.1,2.9,1.03,0,"1 nonsynonymous","D59N",1
"lib1","SARS-CoV-2","TCAAATTGTGAGTCTA",4,113.42,10.09,-0.68,0.06,2.69,1.02,0,">1 nonsynonymous","S36L T46E T100I Y123S E154S",5
"lib1","SARS-CoV-2","TCAAATTTAACTAGGC",3,95.41,8.85,-1.91,0.06,2.79,1.12,0,">1 nonsynonymous","T3F V37Y F156C",3
"lib1","SARS-CoV-2","TCAAATTTGACTACAC",7,114.38,10.3,-0.46,0.05,2.86,1.08,0,">1 nonsynonymous","K87L E141L",2
"lib1","SARS-CoV-2","TCAAATTTGAGTCGAC",4,88.64,8.53,-2.24,0.14,2.16,1.11,0.01,">1 nonsynonymous","G83I L125Y",2
"lib1","SARS-CoV-2","TCAAATTTGTACATAA",1,23.77,10.41,-0.36,0.07,2.96,1,0,">1 nonsynonymous","L38V G174N",2
"lib1","SARS-CoV-2","TCAACAAAAACGAATA",6,94.66,10.53,-0.24,0.05,2.9,1.04,0,"1 nonsynonymous","S41G",1
"lib1","SARS-CoV-2","TCAACAAAAAGAAATG",3,25.78,10.61,-0.16,0.07,2.96,1.04,0,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","TCAACAAAAAGCTTAT",3,27.45,9.71,-1.06,0.08,2.69,1.12,0,">1 nonsynonymous","N109S T201E",2
"lib1","SARS-CoV-2","TCAACAAAAATATCCA",9,159.06,6.02,-4.74,0.34,2.12,1.13,0,">1 nonsynonymous","F126D P149C",2
"lib1","SARS-CoV-2","TCAACAAAACTATTCA",1,60.47,8.73,-2.03,0.17,1.61,1.15,0.02,">1 nonsynonymous","P7K Y21P F62P",3
"lib1","SARS-CoV-2","TCAACAAACATCTAAC",1,4.29,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TCAACAAACCAACCAC",1,0.43,NA,NA,NA,NA,NA,NA,"stop","L60A L125R Y178*",3
"lib1","SARS-CoV-2","TCAACAAAGGTTGTTG",6,73.46,10.75,-0.01,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAACAAATAATAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","P54K I72N D90S P169V P177*",5
"lib1","SARS-CoV-2","TCAACAAATCACAAAA",2,30.91,6,-4.76,1.68,1.5,1.12,0.01,">1 nonsynonymous","G86L N107S I142V",3
"lib1","SARS-CoV-2","TCAACAACAAGAAAAA",3,57.22,10.78,0.02,0.06,2.91,1.02,0,"1 nonsynonymous","Q84K",1
"lib1","SARS-CoV-2","TCAACAACAAGACCCA",3,6.17,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F70L L95N V103G N157K P161S",5
"lib1","SARS-CoV-2","TCAACAACCATACCGG",4,0.29,NA,NA,NA,NA,NA,NA,"stop","Y35R D90I T170* T201M",4
"lib1","SARS-CoV-2","TCAACAACCGTCATTA",7,129.62,10.53,-0.23,0.05,2.88,1.08,0,"1 nonsynonymous","D59C",1
"lib1","SARS-CoV-2","TCAACAACGGTACGGC",3,177.71,8.69,-2.07,0.09,2.78,1.07,0,">1 nonsynonymous","L60V D97T G155S N171E",4
"lib1","SARS-CoV-2","TCAACAACTAAATGGA",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S N107S E135T A190V P197E",5
"lib1","SARS-CoV-2","TCAACAAGCTAATCGA",3,63.86,7.36,-3.4,0.34,1.5,1.04,0.03,">1 nonsynonymous","S41D P161L",2
"lib1","SARS-CoV-2","TCAACAAGGTTGGCAA",4,134.95,6.67,-4.09,0.29,1.5,1.15,0.01,">1 nonsynonymous","R78E Y121F F156M Y165N",4
"lib1","SARS-CoV-2","TCAACAATAACGCATT",7,39.07,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I80G F134G",2
"lib1","SARS-CoV-2","TCAACAATCTTCCTAG",3,0.83,NA,NA,NA,NA,NA,NA,"stop","A33G E141* T170I",3
"lib1","SARS-CoV-2","TCAACAATTCATTCCC",2,40.18,10.1,-0.66,0.12,2.29,1.08,0,">1 nonsynonymous","V52L R136N",2
"lib1","SARS-CoV-2","TCAACACAAGGCTTGC",6,178.62,8.78,-1.99,0.07,2.84,1.12,0,">1 nonsynonymous","G166M V173C A192F",3
"lib1","SARS-CoV-2","TCAACACACAGAGGAA",1,1.63,NA,NA,NA,NA,NA,NA,"stop","S53P D59* I88C K94N G146M G152F",6
"lib1","SARS-CoV-2","TCAACACACCATTGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","TCAACACATCATTACC",5,38.67,6,-4.76,1.9,1.5,1.13,0.01,">1 nonsynonymous","I2V F44L G174T V180N",4
"lib1","SARS-CoV-2","TCAACACATGAATACC",8,85.97,10.5,-0.26,0.04,2.85,1.07,0,">1 nonsynonymous","N4P K114D",2
"lib1","SARS-CoV-2","TCAACACATTTCAAAT",3,16.71,6.58,-4.18,0.39,1.5,1.09,0.04,">1 nonsynonymous","F70R P96S W106M Y123F N171R",5
"lib1","SARS-CoV-2","TCAACACCAAGCCAAT",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54K G116E Y121N S147F",4
"lib1","SARS-CoV-2","TCAACACCAGAAACAA",1,26.96,6,-4.76,2,1.59,1.18,0.01,">1 nonsynonymous","S129N N151C G172L V181S",4
"lib1","SARS-CoV-2","TCAACACCATGCACCA",2,33.09,8.82,-1.94,0.25,1.5,1.06,0.03,">1 nonsynonymous","F44T L162H Q163K T201R",4
"lib1","SARS-CoV-2","TCAACACCTATACAGC",4,36.46,10.8,0.04,0.07,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAACACGAATTTAAA",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95F F167V",2
"lib1","SARS-CoV-2","TCAACACGTTGCATCT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","V32L L95* T201H",3
"lib1","SARS-CoV-2","TCAACACTATTTATCC",3,43.99,9.13,-1.64,0.09,1.84,1.07,0,"1 nonsynonymous","D137I",1
"lib1","SARS-CoV-2","TCAACAGAACGATAAC",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M C49E L122Y",3
"lib1","SARS-CoV-2","TCAACAGACTGAAGAG",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V P133W R136I G146S",4
"lib1","SARS-CoV-2","TCAACAGATCCACAAT",2,20.19,6,-4.76,1.12,1.5,1.19,0.01,">1 nonsynonymous","A89R D112R P191R",3
"lib1","SARS-CoV-2","TCAACAGCCCCATTAA",1,40.08,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S69R A89T G172R",3
"lib1","SARS-CoV-2","TCAACATATAGGCACA",2,40.44,10.78,0.01,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAACATATCACAAAA",6,69.48,10.79,0.03,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAACATATTGCTTGG",3,89.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T T55F S129I E186Y",4
"lib1","SARS-CoV-2","TCAACATGTAAGCGGG",1,1.92,NA,NA,NA,NA,NA,NA,"stop","E10G D90T P149* G166K",4
"lib1","SARS-CoV-2","TCAACATTGCAATTCG",1,16.27,9.31,-1.46,0.14,2.07,1.06,0.01,">1 nonsynonymous","T15M S164L T201M",3
"lib1","SARS-CoV-2","TCAACATTGGAACTTA",14,59.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F47S V65R I72L",3
"lib1","SARS-CoV-2","TCAACCAACAAAATCC",3,113.83,10.03,-0.74,0.09,2.36,1.03,0,">1 nonsynonymous","N40L D90Y",2
"lib1","SARS-CoV-2","TCAACCAAGGCTCCTT",9,149.99,9.83,-0.93,0.07,2.49,1.09,0,">1 nonsynonymous","L57V N107P P197W",3
"lib1","SARS-CoV-2","TCAACCAATACAGCTG",2,23.38,10.91,0.15,0.08,2.96,1.03,0,"1 nonsynonymous","G9D",1
"lib1","SARS-CoV-2","TCAACCACGACCTTTC",2,23.7,10.9,0.14,0.08,2.98,1,0,">1 nonsynonymous","A192T S200V",2
"lib1","SARS-CoV-2","TCAACCACTCATCCAA",3,3.53,NA,NA,NA,NA,NA,NA,"stop","A33R Y50* E154T L183S",4
"lib1","SARS-CoV-2","TCAACCAGAGGAACGG",3,6.19,NA,NA,NA,NA,NA,NA,"stop","T63I G86E S108* T140R",4
"lib1","SARS-CoV-2","TCAACCAGTAGTGTTT",5,65.08,9.08,-1.68,0.05,2.9,1.08,0,">1 nonsynonymous","C61M R78H S164V G174L",4
"lib1","SARS-CoV-2","TCAACCATAAATATAA",6,2.41,NA,NA,NA,NA,NA,NA,"stop","T15* T85E F99T F126T P161T",5
"lib1","SARS-CoV-2","TCAACCATCACCACGT",1,64.41,8.9,-1.87,0.08,2.72,1.11,0,">1 nonsynonymous","T140L N157A",2
"lib1","SARS-CoV-2","TCAACCATCTCCCACT",2,47.2,7.22,-3.54,0.12,1.9,1.1,0,"1 nonsynonymous","C150V",1
"lib1","SARS-CoV-2","TCAACCATCTTTTGCT",8,104.33,10.55,-0.22,0.04,2.89,1.01,0,">1 nonsynonymous","N4C D98S",2
"lib1","SARS-CoV-2","TCAACCATTCTTGTCT",2,15.23,10.27,-0.49,0.1,2.85,1,0.01,">1 nonsynonymous","N107S E154A T201G",3
"lib1","SARS-CoV-2","TCAACCCCAGAAATGG",2,13.73,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Y50W R78C G86N D97L R124L I142F",6
"lib1","SARS-CoV-2","TCAACCCCCTCCCTGA",4,56.13,10.8,0.04,0.05,2.94,1.03,0,"1 nonsynonymous","T3R",1
"lib1","SARS-CoV-2","TCAACCCCTCACCAAT",1,5.16,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3S S36K L60K F70Y K87C T100S V115T",7
"lib1","SARS-CoV-2","TCAACCCGTTAAACTA",5,58.67,10.72,-0.04,0.04,2.96,1.04,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","TCAACCCGTTAGTGAA",2,33.58,9.2,-1.56,0.35,1.5,1,0.04,">1 nonsynonymous","F17T A89T P191G",3
"lib1","SARS-CoV-2","TCAACCCTGGGTACTC",7,43.69,10.44,-0.33,0.06,2.89,1.06,0,">1 nonsynonymous","T3N K48M G152D T201K",4
"lib1","SARS-CoV-2","TCAACCGAAAATATAA",2,40.44,9.67,-1.09,0.08,2.83,1.06,0,">1 nonsynonymous","N1P Y119M",2
"lib1","SARS-CoV-2","TCAACCGAAACTTCAT",5,26.16,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G101N K114S G174E",3
"lib1","SARS-CoV-2","TCAACCGAAATGTGCG",3,28.13,10.6,-0.16,0.08,2.94,1,0,"1 nonsynonymous","D98W",1
"lib1","SARS-CoV-2","TCAACCGATATCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TCAACCGGATAATAGA",2,15.61,6,-4.76,2,3,1.07,0,">1 nonsynonymous","S69V N107H I138P",3
"lib1","SARS-CoV-2","TCAACCGGTAAACACA",1,10.06,10.54,-0.23,0.13,2.88,1.08,0.01,">1 nonsynonymous","N13S C61R",2
"lib1","SARS-CoV-2","TCAACCGTAAATATTA",6,55.67,8.42,-2.35,0.13,1.89,1.13,0.01,">1 nonsynonymous","Q176R L183I",2
"lib1","SARS-CoV-2","TCAACCGTAGTTTAGT",1,18.63,9.95,-0.81,0.26,1.79,1,0.02,">1 nonsynonymous","G51W I138Q",2
"lib1","SARS-CoV-2","TCAACCTAACATTTGA",5,52.47,8.64,-2.13,0.24,2.01,1.13,0.02,">1 nonsynonymous","G117E A145T Q168S",3
"lib1","SARS-CoV-2","TCAACCTAAGGTTAAC",1,33.1,6,-4.76,0.72,3,1.09,0,">1 nonsynonymous","C6I F167C F185I A190S",4
"lib1","SARS-CoV-2","TCAACCTACTTTCTGC",2,59.74,10.48,-0.28,0.09,2.78,1.05,0,">1 nonsynonymous","G83C S129F",2
"lib1","SARS-CoV-2","TCAACCTATACTGGAA",1,13.72,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A42T C49Y T55G T85F N92S",5
"lib1","SARS-CoV-2","TCAACCTTAACCCTGG",3,80.86,10.72,-0.05,0.04,2.97,1.01,0,"1 nonsynonymous","K132Y",1
"lib1","SARS-CoV-2","TCAACCTTAGTTAGTA",2,50.76,8.49,-2.27,0.11,2.1,1.09,0.01,">1 nonsynonymous","R27V Y66M N110V Y143C",4
"lib1","SARS-CoV-2","TCAACCTTTCCAGGTT",4,56.41,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R25Y G51E K94M E154M K199C",5
"lib1","SARS-CoV-2","TCAACGAAACATCATT",2,14.69,6,-4.76,2,3,1.2,0.04,">1 nonsynonymous","F8S I142R P177L",3
"lib1","SARS-CoV-2","TCAACGAAACGAGTGC",7,54.8,6.23,-4.54,0.93,1.5,1.19,0.04,">1 nonsynonymous","C49T R136I",2
"lib1","SARS-CoV-2","TCAACGAACCATAAAG",8,223.39,10.82,0.05,0.05,2.92,1.03,0,"1 nonsynonymous","N24S",1
"lib1","SARS-CoV-2","TCAACGAATCTGTAAG",2,26.97,9.77,-1,0.15,1.91,1.04,0.01,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TCAACGATAACCCAAG",5,49.52,10.71,-0.05,0.07,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAACGATCCAGTAAA",4,23.5,10.62,-0.14,0.07,2.68,1.19,0,">1 nonsynonymous","V37R D97S",2
"lib1","SARS-CoV-2","TCAACGCAAACACAAA",2,8.1,6,-4.76,2,1.5,1.16,0.07,">1 nonsynonymous","L5Y S45W A81M D112K F134C G146M E154T",7
"lib1","SARS-CoV-2","TCAACGCGCAATAAAC",2,95.12,10.38,-0.38,0.06,2.92,1.03,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","TCAACGCTAAGATCAT",3,22.44,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","E10K C49R L95A S139W",4
"lib1","SARS-CoV-2","TCAACGCTTTTTTTCA",4,83.95,10.2,-0.56,0.07,2.79,1.02,0,">1 nonsynonymous","S29C Q84L T201G",3
"lib1","SARS-CoV-2","TCAACGGCCTAAACCA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","A14V S45C V71* K94T N157H",5
"lib1","SARS-CoV-2","TCAACGGGCGCTATTA",5,89.63,8.05,-2.71,0.14,2.54,1.06,0.01,">1 nonsynonymous","F44G Y159Q",2
"lib1","SARS-CoV-2","TCAACGTAAAGGACCA",1,35.7,10.82,0.05,0.09,2.91,1.05,0,">1 nonsynonymous","A18P Y35W",2
"lib1","SARS-CoV-2","TCAACGTAACTTCGCT",7,65.35,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","I88T N120M G146V",3
"lib1","SARS-CoV-2","TCAACGTAATAATGGA",1,9.52,6.07,-4.7,1,1.5,1.21,0.02,">1 nonsynonymous","I2A L57R A105L I142V",4
"lib1","SARS-CoV-2","TCAACGTACCAAAGTA",3,68.55,6.35,-4.41,0.59,1.5,1.17,0.02,">1 nonsynonymous","W23I N120S P149N",3
"lib1","SARS-CoV-2","TCAACGTACTACGAAG",5,154.52,10.8,0.04,0.05,2.89,1.06,0,"1 nonsynonymous","N151K",1
"lib1","SARS-CoV-2","TCAACGTCCGGCACCA",7,79.42,10.33,-0.43,0.06,2.88,1.07,0,">1 nonsynonymous","C6G Y35L",2
"lib1","SARS-CoV-2","TCAACTAAACATTTGT",4,37.71,10.87,0.11,0.14,2.83,1.01,0.01,"1 nonsynonymous","S147K",1
"lib1","SARS-CoV-2","TCAACTAAATGTGACC",4,2.25,NA,NA,NA,NA,NA,NA,"stop","G9S V37M I80* N118H",4
"lib1","SARS-CoV-2","TCAACTAACAATTATA",1,88.23,10.85,0.08,0.07,2.87,1.08,0,">1 nonsynonymous","I2F P54A P197R",3
"lib1","SARS-CoV-2","TCAACTAACTGTGTCT",5,63.21,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L5A Y35Q G86K Y119I E141K",5
"lib1","SARS-CoV-2","TCAACTAAGGGATAAT",2,51.66,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L60F Y66C Y93W",3
"lib1","SARS-CoV-2","TCAACTAATGAAGTAA",8,150.59,10.39,-0.37,0.04,2.89,1.04,0,">1 nonsynonymous","Y39S Y91L",2
"lib1","SARS-CoV-2","TCAACTACAAGACGCA",1,5.95,6,-4.76,2,1.5,1.02,0,"1 nonsynonymous","R124P",1
"lib1","SARS-CoV-2","TCAACTAGGATCAGTC",15,179.54,10.65,-0.12,0.03,2.92,1.05,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TCAACTATTTCCTCAG",4,28.07,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","T55I Y93R V103R",3
"lib1","SARS-CoV-2","TCAACTCCTAAACCTT",5,129.13,9.44,-1.33,0.07,2.59,1.08,0,">1 nonsynonymous","L5C F44L D97H S113A G166N",5
"lib1","SARS-CoV-2","TCAACTCGCCCTATCA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y E10K D98I P149R",4
"lib1","SARS-CoV-2","TCAACTGATATTTGTG",1,21.25,6.34,-4.43,0.9,1.51,1.28,0.04,">1 nonsynonymous","N4M S19K V37N V103L E154C L183R P191M",7
"lib1","SARS-CoV-2","TCAACTGCAGCTAAGG",5,0.03,NA,NA,NA,NA,NA,NA,"stop","S41D A89D G116* F156P G196V",5
"lib1","SARS-CoV-2","TCAACTGCATGCATAC",1,26.19,10.36,-0.41,0.06,2.83,1.02,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","TCAACTGCTTCCAACG",6,50.15,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G83P P149F",2
"lib1","SARS-CoV-2","TCAACTGTTAAAGAAA",7,47.67,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89T V103M L131Q",3
"lib1","SARS-CoV-2","TCAACTGTTTCCTATC",2,86.82,10.78,0.01,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAACTGTTTGACTAA",3,53.04,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S29K P96I Y165K",3
"lib1","SARS-CoV-2","TCAACTTAAAATGTGA",7,79.16,10.68,-0.08,0.07,2.94,1,0,">1 nonsynonymous","F12I I28F A42L K128P",4
"lib1","SARS-CoV-2","TCAACTTACTATATCG",6,45.94,9.82,-0.95,0.18,1.84,1.12,0.01,">1 nonsynonymous","F12R V115L P197M",3
"lib1","SARS-CoV-2","TCAACTTAGACAGCAG",3,44.64,10.31,-0.45,0.14,2.29,1,0.01,">1 nonsynonymous","V77C S147N Q163H",3
"lib1","SARS-CoV-2","TCAACTTCAACCTTCC",2,23.42,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V20R V37T A89S P169T",4
"lib1","SARS-CoV-2","TCAACTTCCAATATGA",1,17.35,10.09,-0.68,0.09,2.82,1.03,0,">1 nonsynonymous","T3A L57M N120V",3
"lib1","SARS-CoV-2","TCAACTTCTTCAGATG",3,125.68,10.69,-0.07,0.04,2.95,1.01,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","TCAACTTGGATGCGAA",3,2.15,NA,NA,NA,NA,NA,NA,"stop","R16Y Y143* S164G",3
"lib1","SARS-CoV-2","TCAACTTTACCTAACT",5,67.49,6,-4.76,2,3,1.13,0,">1 nonsynonymous","E10D A22S N107Y Y165G V173R T201C",6
"lib1","SARS-CoV-2","TCAACTTTCGACCATA",2,39.67,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","N4I N107I S139K G146N",4
"lib1","SARS-CoV-2","TCAACTTTGAATGAAG",4,107.29,10.05,-0.72,0.07,2.44,1,0,">1 nonsynonymous","G9L Y35R",2
"lib1","SARS-CoV-2","TCAAGAAAAAAAGGGT",1,5.59,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F12L D112K F134G",3
"lib1","SARS-CoV-2","TCAAGAAAATTACGAC",2,51.22,10.81,0.04,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGAAATGTTACAT",6,24.64,8.75,-2.01,0.22,1.61,1.21,0.02,">1 nonsynonymous","T3L Y165L",2
"lib1","SARS-CoV-2","TCAAGAAATTCTCATA",4,14.41,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","A89E Y165L",2
"lib1","SARS-CoV-2","TCAAGAACACCAGACG",4,25.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L95K T100N T201Q",3
"lib1","SARS-CoV-2","TCAAGAACCACACTAG",2,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L W106A N130F",3
"lib1","SARS-CoV-2","TCAAGAAGAGGTAAAG",1,24.49,9.72,-1.05,0.06,2.92,1.08,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","TCAAGAAGTTGATAAT",2,11.25,9.44,-1.33,0.23,2.69,1.23,0.02,">1 nonsynonymous","G116S A145C T201R",3
"lib1","SARS-CoV-2","TCAAGAATCAATCGCA",6,34.06,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F44Y K132R F167S G174F",4
"lib1","SARS-CoV-2","TCAAGAATTCAAGGCA",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V S43M",2
"lib1","SARS-CoV-2","TCAAGAATTCTTACGA",5,3.51,NA,NA,NA,NA,NA,NA,"stop","E10S C31I T55* G83Y E141G P149K N157Q",7
"lib1","SARS-CoV-2","TCAAGACAAAGAACAT",4,0.14,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib1","SARS-CoV-2","TCAAGACAGAGCAACT",2,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V R78F C102Y N157V",4
"lib1","SARS-CoV-2","TCAAGACCATGTAGGA",8,0.24,NA,NA,NA,NA,NA,NA,"stop","T15R V32R Y39* N58T K87R",5
"lib1","SARS-CoV-2","TCAAGACCCAGAAAAA",2,66.47,10.75,-0.01,0.08,2.88,1.07,0,"1 nonsynonymous","T201C",1
"lib1","SARS-CoV-2","TCAAGACGACGAGAAG",11,118.22,9.98,-0.79,0.06,2.86,1.03,0,">1 nonsynonymous","K87S G155A",2
"lib1","SARS-CoV-2","TCAAGACGGTTATAGG",4,28.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12K D90N P96V",3
"lib1","SARS-CoV-2","TCAAGACTAAATTAGT",1,2.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TCAAGACTAATTATAT",5,86.94,10.8,0.04,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGACTGACCTACT",4,1.06,NA,NA,NA,NA,NA,NA,"stop","I28* D97Y G101R D137S",4
"lib1","SARS-CoV-2","TCAAGACTTTATCAAG",4,11.21,9.49,-1.28,0.32,1.5,1,0.08,">1 nonsynonymous","S43Q P54I K94Y F134L E154S",5
"lib1","SARS-CoV-2","TCAAGAGAACAAGTAC",7,19.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61S V103N S139Y",3
"lib1","SARS-CoV-2","TCAAGAGAATATGCCC",8,40.81,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S19G A89S F99P T140G",4
"lib1","SARS-CoV-2","TCAAGAGCACTACACA",1,8.78,10.59,-0.17,0.11,2.94,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGAGGCGTACCGT",8,147.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A81E G117D P133I N157S",4
"lib1","SARS-CoV-2","TCAAGAGGCGTTACGA",3,21.52,10.9,0.14,0.06,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGAGGTACTCTTA",4,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H D98Y",2
"lib1","SARS-CoV-2","TCAAGAGTAAACAATA",3,1.13,NA,NA,NA,NA,NA,NA,"stop","Y21* D90I",2
"lib1","SARS-CoV-2","TCAAGAGTATTATAGA",2,26.63,9.96,-0.8,0.09,2.24,1.01,0,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","TCAAGAGTATTCAGAA",7,214.61,10.44,-0.33,0.03,2.9,1.05,0,">1 nonsynonymous","T15V Y91F",2
"lib1","SARS-CoV-2","TCAAGAGTTTATATTT",1,1.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172S",1
"lib1","SARS-CoV-2","TCAAGATAACTTTTCA",5,10.88,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S41F V103G I138M F167S S200I",5
"lib1","SARS-CoV-2","TCAAGATAAGGACAGT",12,62.42,7.57,-3.2,0.26,1.5,1.12,0.02,">1 nonsynonymous","F12S C31Q N130Y",3
"lib1","SARS-CoV-2","TCAAGATACAACACAA",1,4.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99G",1
"lib1","SARS-CoV-2","TCAAGATGATTTAAAT",1,8.46,10.76,-0.01,0.11,2.79,1.04,0.01,"1 nonsynonymous","L183M",1
"lib1","SARS-CoV-2","TCAAGATTAGCCCTAA",4,64.19,10.77,0.01,0.09,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGATTGATCCAAC",5,146.85,10.68,-0.09,0.06,2.9,1.07,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","TCAAGATTGATGATAT",2,42.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14L P82L Y143V P177R",4
"lib1","SARS-CoV-2","TCAAGCAGACTTATGA",1,22.51,6.67,-4.09,0.82,1.5,1.12,0.02,">1 nonsynonymous","W23V K56V N64V Y91T P96A",5
"lib1","SARS-CoV-2","TCAAGCAGTCCTAATG",14,78.32,6.07,-4.69,1.06,1.5,1.21,0.02,">1 nonsynonymous","A89T T140R V181Y",3
"lib1","SARS-CoV-2","TCAAGCCAAAGAAATC",3,90.78,10.47,-0.29,0.05,2.89,1.03,0,">1 nonsynonymous","I2V A33M F160V",3
"lib1","SARS-CoV-2","TCAAGCCACAGCGGTT",8,137.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59E G152P G172V",3
"lib1","SARS-CoV-2","TCAAGCCACCATTCGC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","Y39M S45H S139*",3
"lib1","SARS-CoV-2","TCAAGCCACTAATGAG",1,27.72,8.78,-1.98,0.21,1.5,1.09,0.04,">1 nonsynonymous","A81V A105M",2
"lib1","SARS-CoV-2","TCAAGCCAGGTTAATC",2,20.92,6.22,-4.55,0.84,1.55,1.19,0.04,">1 nonsynonymous","V52C G83Y P96L I104V",4
"lib1","SARS-CoV-2","TCAAGCCCCACACAAT",1,33.76,10.37,-0.39,0.1,2.97,1.02,0,">1 nonsynonymous","Y39R T148P",2
"lib1","SARS-CoV-2","TCAAGCCCCGACCTAG",1,22.85,10.34,-0.43,0.04,2.92,1.07,0,">1 nonsynonymous","P7F V32T A42N",3
"lib1","SARS-CoV-2","TCAAGCCCTTAATTAT",2,18.49,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4L L38P F47S F62Y L95M W106C N118I G146W",8
"lib1","SARS-CoV-2","TCAAGCCTAATTTAGC",3,19.83,8.95,-1.81,0.25,1.53,1.18,0.02,">1 nonsynonymous","E10R R136C Q144A",3
"lib1","SARS-CoV-2","TCAAGCCTAGGCAACT",4,0.03,NA,NA,NA,NA,NA,NA,"stop","T3* F99L I142R A192E",4
"lib1","SARS-CoV-2","TCAAGCCTTTAACTTT",9,121.98,7.85,-2.91,0.23,1.5,1.11,0.02,">1 nonsynonymous","V11C R136T",2
"lib1","SARS-CoV-2","TCAAGCGAAACCTAGG",1,6.82,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","A22D V103P R136P",3
"lib1","SARS-CoV-2","TCAAGCGAGTACCGTA",5,50.12,9.8,-0.96,0.11,1.81,1.09,0,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","TCAAGCGCCAGCGCCA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F12* N40C K87T",3
"lib1","SARS-CoV-2","TCAAGCGGAAACAATT",3,102.9,10.79,0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGCTACAAACGCA",4,74.16,8.9,-1.87,0.13,1.62,1.07,0.01,">1 nonsynonymous","F12E T100V N107P",3
"lib1","SARS-CoV-2","TCAAGCTATCTGAGAC",4,115.65,10.38,-0.38,0.03,2.96,1,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","TCAAGCTATTGCGTGG",8,139.18,9.83,-0.93,0.1,1.88,1.05,0,">1 nonsynonymous","N4F D59L Q144R",3
"lib1","SARS-CoV-2","TCAAGCTCTCACATTA",5,7.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42N K94S R127E I142D L183Q T201K",6
"lib1","SARS-CoV-2","TCAAGCTTGTAACAGT",7,67.86,10.66,-0.1,0.06,2.87,1.08,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","TCAAGGAAAGAACCGC",10,6.39,NA,NA,NA,NA,NA,NA,"stop","F12* R16M S53E L95P G196R",5
"lib1","SARS-CoV-2","TCAAGGAAAGAACTAC",1,11.98,9.22,-1.55,0.37,1.5,1,0.04,">1 nonsynonymous","A42V P133T G155F",3
"lib1","SARS-CoV-2","TCAAGGAAAGCCGAAC",5,35.02,6.37,-4.39,0.44,1.5,1.16,0.01,">1 nonsynonymous","D68V S129R",2
"lib1","SARS-CoV-2","TCAAGGAAATAACACG",8,3.11,NA,NA,NA,NA,NA,NA,"stop","V37M F44W S113* Y165M Q168* S200R",6
"lib1","SARS-CoV-2","TCAAGGAACATTATTC",8,44.26,9.42,-1.34,0.25,1.63,1.1,0.03,">1 nonsynonymous","N1L N40R A81N",3
"lib1","SARS-CoV-2","TCAAGGAAGAAAACAT",4,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A P96L W106A V182P",4
"lib1","SARS-CoV-2","TCAAGGACGATACCTA",11,119.37,10.75,-0.01,0.04,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGGAGTAACAGGT",1,21.95,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","Y93V",1
"lib1","SARS-CoV-2","TCAAGGAGTTCCATAG",5,46.54,6,-4.76,1.51,1.5,1.13,0.01,">1 nonsynonymous","V32T W106P Y123W N151L",4
"lib1","SARS-CoV-2","TCAAGGATAGTGCGGG",1,65.96,10.8,0.03,0.08,2.9,1.04,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","TCAAGGCAAAGATTAG",8,48.59,10.81,0.05,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGGCACTGGCCCC",3,5.74,6.14,-4.63,1.76,3,1.05,0,">1 nonsynonymous","V103T R124S",2
"lib1","SARS-CoV-2","TCAAGGCATCCCACAG",3,95.31,10.75,-0.01,0.06,2.9,1.03,0,">1 nonsynonymous","R16Q F160D",2
"lib1","SARS-CoV-2","TCAAGGCTACCTGAAA",1,69.53,10.86,0.1,0.08,2.95,1.02,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","TCAAGGGTAAAGAATT",3,24.82,10.69,-0.07,0.06,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAAGGGTAGACGGCC",1,76.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27Y V65L G86N F134C F185I",5
"lib1","SARS-CoV-2","TCAAGTAAATAGTCCT",1,3.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133N",1
"lib1","SARS-CoV-2","TCAAGTAACAAATTAG",10,100.54,10.1,-0.67,0.05,2.63,1.04,0,">1 nonsynonymous","G9A D98V F134L",3
"lib1","SARS-CoV-2","TCAAGTAAGGATTGAG",1,12.97,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C31S T100F G116V G146V",4
"lib1","SARS-CoV-2","TCAAGTAATAAACATA",1,10.43,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S41W F99K F167A",3
"lib1","SARS-CoV-2","TCAAGTAATAACAGGG",12,142.66,9.94,-0.82,0.1,2.13,1.04,0,">1 nonsynonymous","G51K D59Q D98Y",3
"lib1","SARS-CoV-2","TCAAGTAATTCACTAC",8,54.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86W R124N",2
"lib1","SARS-CoV-2","TCAAGTACGCATGCGG",3,16.39,8.23,-2.54,0.37,1.5,1,0.07,">1 nonsynonymous","L5M D59L Y66W Y93R V103R E186Y",6
"lib1","SARS-CoV-2","TCAAGTACTACCGCGG",1,6.06,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","C49R R136L",2
"lib1","SARS-CoV-2","TCAAGTACTTACAGCA",2,8.45,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L5W L38E D90S I142M T148C",5
"lib1","SARS-CoV-2","TCAAGTATTCATATAT",4,99.97,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P7A C31A F62Q I104E N157F",5
"lib1","SARS-CoV-2","TCAAGTATTGTTCCTG",3,1.58,NA,NA,NA,NA,NA,NA,"stop","F47Y K87A Y121*",3
"lib1","SARS-CoV-2","TCAAGTCAAGGATCCC",5,46.24,10.2,-0.57,0.09,2.81,1.06,0,">1 nonsynonymous","F134I F160Y",2
"lib1","SARS-CoV-2","TCAAGTCACTGCCAAG",6,82.31,10.28,-0.49,0.04,2.9,1.05,0,">1 nonsynonymous","D97L G116L T148I",3
"lib1","SARS-CoV-2","TCAAGTCATGCGTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26W N64S L95E G101D G116* S129F F167I",7
"lib1","SARS-CoV-2","TCAAGTCCAAGATCCT",1,60.16,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","G86W D97R S108L S184T",4
"lib1","SARS-CoV-2","TCAAGTCCACATTACT",2,34.2,10.48,-0.28,0.08,2.89,1.03,0,">1 nonsynonymous","D59W K128E",2
"lib1","SARS-CoV-2","TCAAGTCGCCACTCTT",5,41.01,9.68,-1.09,0.14,2,1.04,0.01,">1 nonsynonymous","I2P R27Y F134D E141M",4
"lib1","SARS-CoV-2","TCAAGTCGCTCTTCTA",3,14.63,6,-4.76,2,1.5,1.15,0.07,">1 nonsynonymous","K94M G101L Y123R T201S",4
"lib1","SARS-CoV-2","TCAAGTGAAACACATG",5,56.67,10.45,-0.32,0.06,2.88,1.01,0,">1 nonsynonymous","T15S L60D",2
"lib1","SARS-CoV-2","TCAAGTGAAATCTCCA",4,70.13,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","P82I N92S I142N Y178K",4
"lib1","SARS-CoV-2","TCAAGTGATAAGATTA",1,6.58,NA,NA,NA,NA,NA,0.31,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","TCAAGTGGACCAGATA",2,26.51,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","R73V Y119P E186T",3
"lib1","SARS-CoV-2","TCAAGTGTATTAATAA",7,2.3,NA,NA,NA,NA,NA,NA,"stop","N24R G146F G155S Q176S K198*",5
"lib1","SARS-CoV-2","TCAAGTTCATACATTT",4,38.39,10.76,-0.01,0.08,2.94,1,0,">1 nonsynonymous","N110D T148Q",2
"lib1","SARS-CoV-2","TCAAGTTGTCATGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42G F47* L125R",3
"lib1","SARS-CoV-2","TCAAGTTTAGCTTGCA",12,66.01,8.59,-2.18,0.33,1.5,1,0.06,">1 nonsynonymous","V181S S200G",2
"lib1","SARS-CoV-2","TCAAGTTTCGCCTAAG",1,27.83,10.16,-0.61,0.25,1.56,1.06,0.02,">1 nonsynonymous","F8K Q163T K199Y",3
"lib1","SARS-CoV-2","TCAAGTTTTCTTTTTA",3,13.08,9.28,-1.49,0.25,1.5,1,0.02,">1 nonsynonymous","N1H W106G",2
"lib1","SARS-CoV-2","TCAAGTTTTTACAAAA",4,127.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35R G51D L57K Y143P",4
"lib1","SARS-CoV-2","TCAATAAAAAGATGAT",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S K56Y I88L G155V Q168A",5
"lib1","SARS-CoV-2","TCAATAAAACTAATAG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V32D G146Y G172*",3
"lib1","SARS-CoV-2","TCAATAAAAGATTAAA",5,3539.01,10.79,0.02,0.05,2.94,1.03,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","TCAATAAAATAGCCCC",3,80.98,7.09,-3.67,0.3,1.5,1.16,0.03,">1 nonsynonymous","F62M N107W",2
"lib1","SARS-CoV-2","TCAATAAATCATGTTT",4,31.73,6,-4.76,1.5,1.5,1.15,0.01,">1 nonsynonymous","F8H T63V D90V Y121I S129V E141L N151M C158E G196L",9
"lib1","SARS-CoV-2","TCAATAAATGTTCGAA",6,25.81,6.08,-4.69,0.98,1.5,1.13,0.02,">1 nonsynonymous","K48L L60G Q84H D98F I138V",5
"lib1","SARS-CoV-2","TCAATAAATTCCAAGT",1,54.58,10.02,-0.74,0.07,2.69,1.07,0,">1 nonsynonymous","T100I I104G N110V L122R",4
"lib1","SARS-CoV-2","TCAATAACGGGCTGTT",2,29.77,10.1,-0.66,0.13,2.66,1.05,0,">1 nonsynonymous","N107S E141D G196W",3
"lib1","SARS-CoV-2","TCAATAACTACAGAAA",2,7.87,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","A42L V77Q R136F",3
"lib1","SARS-CoV-2","TCAATAAGAATGCAAA",8,3.57,NA,NA,NA,NA,NA,NA,"stop","T3R S41T K56* D90W K114S Y119T I142S C158Y",8
"lib1","SARS-CoV-2","TCAATAAGAGACATTT",3,28.98,10.85,0.08,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATAATAAGAATAG",3,17.95,10.2,-0.56,0.07,2.84,1.1,0,">1 nonsynonymous","G9V N13L S29T L122R",4
"lib1","SARS-CoV-2","TCAATAATCAAACGAC",1,22.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56R D98S A105R",3
"lib1","SARS-CoV-2","TCAATAATCTAACCCC",2,10.74,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C61H Y93D K132L Q176L",4
"lib1","SARS-CoV-2","TCAATAATGTCTCGAC",1,31.34,8.19,-2.58,0.16,2.57,1.15,0.01,">1 nonsynonymous","C6Y P149F F156T",3
"lib1","SARS-CoV-2","TCAATACAAAATAGTG",4,79.05,8.17,-2.6,0.22,1.5,1.09,0.02,">1 nonsynonymous","Y35R S113G T140F",3
"lib1","SARS-CoV-2","TCAATACAAGTCCATC",7,0.62,NA,NA,NA,NA,NA,NA,"stop","G86R F167*",2
"lib1","SARS-CoV-2","TCAATACACAAAGAAT",1,6.81,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K56F R78S Y91E F134S F160V",5
"lib1","SARS-CoV-2","TCAATACACTTATTTG",11,83.96,9.45,-1.31,0.08,1.97,1.12,0,">1 nonsynonymous","S36R D98A N107S",3
"lib1","SARS-CoV-2","TCAATACAGAACTGAA",3,26.24,7.34,-3.43,0.29,1.5,1.05,0.02,">1 nonsynonymous","N13V Q176M K198R",3
"lib1","SARS-CoV-2","TCAATACATGAACCGA",3,9.62,6.2,-4.57,0.65,1.5,1.07,0.03,">1 nonsynonymous","A14Q V77R G101H L131V L162E",5
"lib1","SARS-CoV-2","TCAATACCCCACTATA",4,39.94,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","L38N F99T G146R",3
"lib1","SARS-CoV-2","TCAATACGATATGTCG",5,48.34,10.6,-0.17,0.04,2.94,1.03,0,">1 nonsynonymous","T15S N120L",2
"lib1","SARS-CoV-2","TCAATACGATGGTATG",4,49.65,10.77,0.01,0.07,2.89,1.08,0,"1 nonsynonymous","N4A",1
"lib1","SARS-CoV-2","TCAATACTACACTATA",2,13.89,6.23,-4.54,0.51,3,1.2,0.01,">1 nonsynonymous","S43C W106L Y165F",3
"lib1","SARS-CoV-2","TCAATAGAAGAACATA",8,83.66,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","S45T R127D S164L",3
"lib1","SARS-CoV-2","TCAATAGACAGGTTAA",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V E76L N120D S147Y",4
"lib1","SARS-CoV-2","TCAATAGATCTTATTT",2,34.34,10.83,0.07,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATAGATTTACCCT",1,140.28,10.75,-0.01,0.07,2.91,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAATAGCAATCATAT",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24V V65E G74T",3
"lib1","SARS-CoV-2","TCAATAGTTATAAGAG",2,26.64,10.28,-0.49,0.03,2.74,1.02,0,">1 nonsynonymous","P7N T15L V37N K48S T85Q",5
"lib1","SARS-CoV-2","TCAATATAACAAGGCG",7,96.88,9.09,-1.67,0.18,1.5,1.12,0.01,">1 nonsynonymous","L38P I72C",2
"lib1","SARS-CoV-2","TCAATATAAGTCCGCG",1,36.31,9.37,-1.39,0.36,1.5,1,0.07,"1 nonsynonymous","D68V",1
"lib1","SARS-CoV-2","TCAATATACGCATGAC",4,3.02,NA,NA,NA,NA,NA,NA,"stop","P54* G83R Y143M G152R",4
"lib1","SARS-CoV-2","TCAATATAGTTGCAAA",4,106.24,10.7,-0.06,0.04,2.95,1,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","TCAATATATGTAATAC",3,71.84,10.31,-0.46,0.04,2.83,1.02,0,">1 nonsynonymous","A42I K48I N120L P197H",4
"lib1","SARS-CoV-2","TCAATATCATAAGATT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","C31Q T100N T201*",3
"lib1","SARS-CoV-2","TCAATATCTGAGACAC",7,211.55,10.76,-0.01,0.06,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATATGTATATGCG",10,53.83,6.32,-4.44,0.74,1.5,1.22,0.04,">1 nonsynonymous","N4L S41G G116W Q144D G155C",5
"lib1","SARS-CoV-2","TCAATATTAAAACACG",2,10.12,10.71,-0.06,0.12,2.77,1.06,0.01,">1 nonsynonymous","V37A N58L",2
"lib1","SARS-CoV-2","TCAATATTATCGCAAA",4,54.11,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R27L T46Q G117K S129G Y165E",5
"lib1","SARS-CoV-2","TCAATATTCGTTGCCT",3,27.05,6,-4.76,2,1.5,1.27,0.03,"1 nonsynonymous","P177N",1
"lib1","SARS-CoV-2","TCAATATTGATGACAT",12,68.52,6.34,-4.43,0.49,1.5,1.26,0.01,">1 nonsynonymous","D97Q K128V V173L P177C",4
"lib1","SARS-CoV-2","TCAATATTTGCCACCG",10,130.26,6.01,-4.75,1.03,1.5,1.19,0.02,">1 nonsynonymous","T63S P96K V103F",3
"lib1","SARS-CoV-2","TCAATCAACAAACCCG",3,9.66,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41L N64V Y178S V182D",4
"lib1","SARS-CoV-2","TCAATCACCTTACGAG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","A18Y A42V Y119A N151*",4
"lib1","SARS-CoV-2","TCAATCAGCACCTGAG",2,21,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","T3R P161L",2
"lib1","SARS-CoV-2","TCAATCAGTCATCGCA",1,9.78,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","K94D S113Q",2
"lib1","SARS-CoV-2","TCAATCATATGTTAAT",2,29.12,8.62,-2.15,0.06,2.98,1.04,0,"1 nonsynonymous","Y175N",1
"lib1","SARS-CoV-2","TCAATCATCCACTACG",3,100.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C61R S108Y Y165E",3
"lib1","SARS-CoV-2","TCAATCATGAACTAAT",2,215.32,10.32,-0.44,0.04,2.87,1.01,0,">1 nonsynonymous","E141M S164V",2
"lib1","SARS-CoV-2","TCAATCATTACAATCA",7,19.9,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","S69K Y91I N130T",3
"lib1","SARS-CoV-2","TCAATCATTGCGCTGA",1,38.33,10.71,-0.06,0.05,2.98,1,0,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","TCAATCATTTAACTAG",5,3.11,NA,NA,NA,NA,NA,NA,"stop","N107L Y119*",2
"lib1","SARS-CoV-2","TCAATCCAATGAGATA",3,49.7,6,-4.76,2,3,1.11,0,">1 nonsynonymous","T15D N107S N130E Y175D",4
"lib1","SARS-CoV-2","TCAATCCACTCGGAGC",6,51.02,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C61G G86L",2
"lib1","SARS-CoV-2","TCAATCCAGATTAAAC",3,68.8,9.91,-0.86,0.12,2.51,1.08,0.01,">1 nonsynonymous","D34S G155M",2
"lib1","SARS-CoV-2","TCAATCCAGTCATGCA",4,90.21,10.69,-0.07,0.07,2.79,1.04,0,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","TCAATCCATAGCGCCT",11,154.01,10.34,-0.43,0.05,2.88,1.01,0,">1 nonsynonymous","G9I L60S",2
"lib1","SARS-CoV-2","TCAATCCCAAAATTAT",8,69.34,9.74,-1.03,0.1,2.09,1.07,0,">1 nonsynonymous","E10S R27Q N64T P133L",4
"lib1","SARS-CoV-2","TCAATCCCGCAGGCCG",8,0.15,NA,NA,NA,NA,NA,NA,"stop","I28V A89N F156*",3
"lib1","SARS-CoV-2","TCAATCCTACCCCTCG",4,7.86,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","G51F K87R R124K N157I K199T",5
"lib1","SARS-CoV-2","TCAATCCTACGGGAAA",4,0.85,NA,NA,NA,NA,NA,NA,"stop","E10T L60* Y119N E141R T201N",5
"lib1","SARS-CoV-2","TCAATCGAATGACAAT",1,28.95,10.83,0.06,0.11,2.87,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAATCGACTAATCCG",1,13.44,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","L5M N107H C150I",3
"lib1","SARS-CoV-2","TCAATCGATATTAATA",1,10.36,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","N92R",1
"lib1","SARS-CoV-2","TCAATCGGTGCACAAT",2,3.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102Q",1
"lib1","SARS-CoV-2","TCAATCGTACAACAAA",3,2.16,NA,NA,NA,NA,NA,NA,"stop","I72* N171H",2
"lib1","SARS-CoV-2","TCAATCTAACACTAAT",2,11.19,7.15,-3.61,0.46,1.5,1.09,0.06,">1 nonsynonymous","F44R A105R S139Y",3
"lib1","SARS-CoV-2","TCAATCTAATCTTACG",1,1.43,NA,NA,NA,NA,NA,NA,"stop","V52C V77* R127D",3
"lib1","SARS-CoV-2","TCAATCTCCCCCATCA",9,189.06,10.74,-0.03,0.05,2.91,1.04,0,">1 nonsynonymous","R16I G83F",2
"lib1","SARS-CoV-2","TCAATCTTCCGCTTAA",6,35.13,9.83,-0.93,0.22,1.77,1.16,0.02,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TCAATCTTGCCTATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","F8Y N40V P54Q F99* R127H R136L Y143M",7
"lib1","SARS-CoV-2","TCAATCTTGGTACTCA",1,12.3,6,-4.76,2,3,1.08,0,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","TCAATGAACTATAATC",2,56.03,9.16,-1.6,0.1,1.82,1.09,0,">1 nonsynonymous","F17D P197A",2
"lib1","SARS-CoV-2","TCAATGAAGATTCAAT",11,7.02,NA,NA,NA,NA,NA,NA,"stop","A18D Y39* G83S G86D D90I F99S Y165C",7
"lib1","SARS-CoV-2","TCAATGAATGATTCGA",5,1.28,NA,NA,NA,NA,NA,NA,"stop","N4V G9*",2
"lib1","SARS-CoV-2","TCAATGACGGAAAAAC",4,110.35,6,-4.76,0.95,1.5,1.17,0.02,">1 nonsynonymous","N4F G9R K87L R124A",4
"lib1","SARS-CoV-2","TCAATGAGGACCCTCA",2,8.36,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I2V L5V Y66K V77S D98S W106V G152T R179L",8
"lib1","SARS-CoV-2","TCAATGAGGCATTACA",1,7.9,6,-4.76,0.47,1.5,1.03,0,">1 nonsynonymous","P149T E154I T170I V180C K199M",5
"lib1","SARS-CoV-2","TCAATGATATGACAAG",1,55.9,10.66,-0.1,0.04,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATGATTTAATACC",5,39.7,10.84,0.07,0.08,2.85,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATGCCGTGCACAG",9,178.97,10.72,-0.05,0.07,2.91,1.05,0,"1 nonsynonymous","A22E",1
"lib1","SARS-CoV-2","TCAATGCTTAATAGAG",6,72.62,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5Y V11T G86T P149G",4
"lib1","SARS-CoV-2","TCAATGGAATCCAAAA",4,115.28,6,-4.76,1.91,1.5,1.16,0.02,">1 nonsynonymous","V11S E154G Q176G",3
"lib1","SARS-CoV-2","TCAATGGAATGAAGCT",11,104.12,6,-4.76,2,3,1.2,0,">1 nonsynonymous","F12L C61I L95R",3
"lib1","SARS-CoV-2","TCAATGGAATTACTGA",2,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M G101N N130T Q176A",4
"lib1","SARS-CoV-2","TCAATGGAGCAGTCAA",10,79.06,6.31,-4.46,0.56,1.5,1.17,0.02,">1 nonsynonymous","Y35L V65G F126G D137Y",4
"lib1","SARS-CoV-2","TCAATGGAGCTGCATT",2,49.4,10.61,-0.16,0.04,2.96,1.05,0,"1 nonsynonymous","Y123S",1
"lib1","SARS-CoV-2","TCAATGTAGAGTAATA",6,131.8,8.9,-1.87,0.16,1.78,1.15,0.01,">1 nonsynonymous","P149N Q176R",2
"lib1","SARS-CoV-2","TCAATGTCACAAAATA",1,34.07,10.54,-0.23,0.08,2.89,1,0,"1 nonsynonymous","N58Y",1
"lib1","SARS-CoV-2","TCAATGTTCGTAATTT",1,10.36,6.74,-4.02,0.67,1.5,1.09,0.06,">1 nonsynonymous","N64K R179D",2
"lib1","SARS-CoV-2","TCAATGTTTAGTTTTT",1,13.68,6,-4.76,2,3,1.07,0,">1 nonsynonymous","V37E I72V A81S L95Q F126V Y165N",6
"lib1","SARS-CoV-2","TCAATGTTTGTAATAT",2,9.46,10.1,-0.67,0.17,2.81,1,0.01,">1 nonsynonymous","P54D D98P F156P",3
"lib1","SARS-CoV-2","TCAATTAAACAACCTA",2,39.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12S K48S C61D L95E N120L Y175K",6
"lib1","SARS-CoV-2","TCAATTAAATGTAAAG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107S G116I K128D S184M",4
"lib1","SARS-CoV-2","TCAATTAACACACATA",5,21.48,9.49,-1.27,0.1,2.25,1.09,0.01,">1 nonsynonymous","G116T Y123T",2
"lib1","SARS-CoV-2","TCAATTAACAGAACAA",3,39.59,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","P177F",1
"lib1","SARS-CoV-2","TCAATTAACCCACTCA",1,51.42,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V77K A105I N157S Y175V",4
"lib1","SARS-CoV-2","TCAATTAAGGAAGCAA",1,87.85,10.76,0,0.12,2.66,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATTAATATCTACC",4,64.66,10.82,0.06,0.07,2.9,1.02,0,"1 nonsynonymous","E154T",1
"lib1","SARS-CoV-2","TCAATTACATATAACG",2,8.92,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","I88R K198W",2
"lib1","SARS-CoV-2","TCAATTACATTAAGAA",10,188.92,10.74,-0.02,0.07,2.93,1.05,0,">1 nonsynonymous","A42K P149T",2
"lib1","SARS-CoV-2","TCAATTACCTCGAGAG",5,6.4,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","A33T W106L Y119S T170M",4
"lib1","SARS-CoV-2","TCAATTACTCACCAGG",1,27.66,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","C61L R73L N107S R124V F167L",5
"lib1","SARS-CoV-2","TCAATTACTCAGACAC",8,114.98,9.17,-1.6,0.07,2.78,1.1,0,">1 nonsynonymous","C6G K56E K87G",3
"lib1","SARS-CoV-2","TCAATTAGAAAATTCC",3,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F D59Y I88C V182G",4
"lib1","SARS-CoV-2","TCAATTAGAGCTGTGT",1,21.09,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F47H L60N P177N",3
"lib1","SARS-CoV-2","TCAATTAGATCTTTAC",5,60.92,6,-4.76,1.69,1.5,1.13,0.01,">1 nonsynonymous","I28T C158P",2
"lib1","SARS-CoV-2","TCAATTAGTTAGAACA",2,78.65,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A105S P149F G172E",3
"lib1","SARS-CoV-2","TCAATTATGACGAGGG",9,164.83,10.79,0.02,0.06,2.93,1.04,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","TCAATTATTACTTAAT",2,12.88,6.19,-4.58,0.92,1.5,1.1,0.04,">1 nonsynonymous","G101N G155L",2
"lib1","SARS-CoV-2","TCAATTCACAAACGGA",2,22.71,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","F17E Y119V",2
"lib1","SARS-CoV-2","TCAATTCAGGGTCAAG",4,37.6,10.26,-0.51,0.1,2.86,1.01,0,">1 nonsynonymous","A33L N151P S164T",3
"lib1","SARS-CoV-2","TCAATTCATAAAATAT",9,318.72,10.77,0.01,0.05,2.86,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAATTCATTTCAATT",1,37.01,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","D112Q T140R F160T",3
"lib1","SARS-CoV-2","TCAATTCCAATTCCAG",5,109.74,10.57,-0.2,0.05,2.87,1.04,0,"1 nonsynonymous","S36Y",1
"lib1","SARS-CoV-2","TCAATTCCGAAAATAT",4,66.14,10.2,-0.56,0.04,2.96,1.01,0,">1 nonsynonymous","N40E A145E",2
"lib1","SARS-CoV-2","TCAATTCCTATAACGC",12,180.28,10.39,-0.38,0.05,2.89,1.05,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","TCAATTCGTTTCGAAA",2,1.04,NA,NA,NA,NA,NA,NA,"stop","E141* N151H F156N",3
"lib1","SARS-CoV-2","TCAATTCTAGGATGCT",3,19.78,6,-4.76,1.03,1.5,1.05,0,">1 nonsynonymous","S113E R136T C150V P197S",4
"lib1","SARS-CoV-2","TCAATTCTGATAAAAC",2,14.8,6,-4.76,0.78,3,1.11,0.01,">1 nonsynonymous","C6M A81S D98M K199V",4
"lib1","SARS-CoV-2","TCAATTGAAAACCTCA",8,99.06,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","R16S C61N N107S C150Y Y175E",5
"lib1","SARS-CoV-2","TCAATTGAAGATAACG",1,0.91,NA,NA,NA,NA,NA,NA,"stop","P7H F47* A105I Y121M",4
"lib1","SARS-CoV-2","TCAATTGATAACAACG",2,27.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I2D D112T R124L S139T G155N",5
"lib1","SARS-CoV-2","TCAATTGATAATAGTT",6,56.31,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","V20S K56M R73K K94L K128V Q144I",6
"lib1","SARS-CoV-2","TCAATTGCAAAAAACA",3,48.59,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C61L L122G I138A P161D",4
"lib1","SARS-CoV-2","TCAATTGCTTCACAGT",2,39.9,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","F126N Q168L",2
"lib1","SARS-CoV-2","TCAATTGGAAGTTGTT",1,12.33,6,-4.76,1.63,1.5,1.18,0.07,">1 nonsynonymous","I88M L95Q",2
"lib1","SARS-CoV-2","TCAATTGGGGCACCTC",12,167.81,8.15,-2.61,0.15,1.52,1.14,0.01,">1 nonsynonymous","S43N Y119C F134I",3
"lib1","SARS-CoV-2","TCAATTGTATCATAGT",5,27.62,10.78,0.01,0.11,2.87,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCAATTGTGGCACAGA",2,54.73,10.31,-0.45,0.04,2.93,1,0,">1 nonsynonymous","T63Q R78W Q84M E141R",4
"lib1","SARS-CoV-2","TCAATTTAAAATGAAG",20,379.38,9.85,-0.91,0.05,2.67,1.08,0,"1 nonsynonymous","N107K",1
"lib1","SARS-CoV-2","TCAATTTAATTAATTA",1,34.75,10.36,-0.4,0.06,2.89,1.06,0,">1 nonsynonymous","K132E A145I",2
"lib1","SARS-CoV-2","TCAATTTACACCTAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A145I G166R",2
"lib1","SARS-CoV-2","TCAATTTATTCGAAAC",1,19.13,9.65,-1.11,0.16,1.75,1.17,0.02,">1 nonsynonymous","D97T L122N E135R T201V",4
"lib1","SARS-CoV-2","TCAATTTCAACCAGCG",1,9.63,6,-4.76,1.06,3,1.01,0,">1 nonsynonymous","N40D T85P N92Y",3
"lib1","SARS-CoV-2","TCAATTTCATAAGAGT",1,7.57,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F44L C102R",2
"lib1","SARS-CoV-2","TCAATTTCATCAAAAC",2,5.56,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","A18T V77S I104R G146Y N151M",5
"lib1","SARS-CoV-2","TCAATTTCTATCTAGA",3,72.33,10.71,-0.06,0.09,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAATTTCTATGCATT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","F8* K56T Y91* P133F T140I",5
"lib1","SARS-CoV-2","TCAATTTCTGTGTGAT",6,173.22,10.82,0.05,0.04,2.93,1.03,0,">1 nonsynonymous","T3M T46S N110V N130K",4
"lib1","SARS-CoV-2","TCAATTTGTTCTCCTA",4,83.73,9.79,-0.97,0.1,2.29,1.03,0,">1 nonsynonymous","N64K G83V",2
"lib1","SARS-CoV-2","TCAATTTGTTTTAAAT",3,36.56,8.49,-2.27,0.18,1.95,1.13,0.02,">1 nonsynonymous","T55N I72T E154F",3
"lib1","SARS-CoV-2","TCAATTTTAACTACGA",3,83.61,10.1,-0.66,0.04,2.82,1,0,">1 nonsynonymous","S29L N64Y Y91L L188D",4
"lib1","SARS-CoV-2","TCACAAAAACTTGGCC",1,16.84,6.49,-4.28,0.22,1.57,1.12,0,">1 nonsynonymous","F47C N120R D137V Q163K",4
"lib1","SARS-CoV-2","TCACAAAAATAGCGCA",4,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51P D59P N110F G155N",4
"lib1","SARS-CoV-2","TCACAAAAGGTACGAT",3,82.2,10.84,0.07,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCACAAAATAACAGAA",1,40.95,10.04,-0.72,0.05,2.86,1.04,0,">1 nonsynonymous","C31S N130S",2
"lib1","SARS-CoV-2","TCACAAAATGGCAGGG",2,15.88,6,-4.76,2,3,1.07,0,">1 nonsynonymous","T46F Y93K L162M",3
"lib1","SARS-CoV-2","TCACAAACCGTTATCG",6,19.3,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T3L P82D T100L T148R",4
"lib1","SARS-CoV-2","TCACAAACGGGACACA",7,105.68,6,-4.76,2,3,1.13,0,">1 nonsynonymous","P96E F156L G172V",3
"lib1","SARS-CoV-2","TCACAAACTAAATAGC",4,44.76,10.64,-0.12,0.04,2.92,1.02,0,">1 nonsynonymous","K132N H189F",2
"lib1","SARS-CoV-2","TCACAAACTACTATTC",3,77.8,10.77,0,0.06,2.95,1.02,0,"1 nonsynonymous","T140G",1
"lib1","SARS-CoV-2","TCACAAAGGATGAGAA",5,30.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","K94Q T140R G172R T201K",4
"lib1","SARS-CoV-2","TCACAAAGGGATTCGT",2,22.28,6,-4.76,1.41,3,1.17,0,">1 nonsynonymous","D97R A105P G146V",3
"lib1","SARS-CoV-2","TCACAAATAAAACAGA",2,44.07,10.8,0.04,0.08,2.97,1,0,"1 nonsynonymous","T63A",1
"lib1","SARS-CoV-2","TCACAAATAAAAGGCG",3,3.34,NA,NA,NA,NA,NA,NA,"stop","C6S F44R Y50S N58S G86Q F126P R179*",7
"lib1","SARS-CoV-2","TCACAAATAAGTACAA",3,2.28,NA,NA,NA,NA,NA,NA,"stop","N1R F44W C49* D90F D98V",5
"lib1","SARS-CoV-2","TCACAAATAATTAGAA",1,34.73,10.32,-0.44,0.07,2.94,1.03,0,">1 nonsynonymous","Y35F K94A G166N",3
"lib1","SARS-CoV-2","TCACAAATATTGATTC",3,49.59,10.34,-0.42,0.07,2.5,1.02,0,">1 nonsynonymous","Y39V N120H R127S S147P F160K",5
"lib1","SARS-CoV-2","TCACAAATCAACCATT",1,51.26,10.71,-0.05,0.04,2.98,1.01,0,"1 nonsynonymous","T100C",1
"lib1","SARS-CoV-2","TCACAAATCTTCTAGG",7,42.71,10.78,0.01,0.06,2.89,1.06,0,"1 nonsynonymous","F134N",1
"lib1","SARS-CoV-2","TCACAAATTATAACGA",2,18.69,6,-4.76,2,3,1.09,0,">1 nonsynonymous","R16S S45N A81L T100S G146Y",5
"lib1","SARS-CoV-2","TCACAAATTTTAATTT",18,264.78,10.73,-0.04,0.06,2.94,1.03,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TCACAACAACCACGAG",3,57.29,9.63,-1.14,0.14,2.45,1.04,0.01,">1 nonsynonymous","I104T G174W",2
"lib1","SARS-CoV-2","TCACAACAAGCCACCT",2,0.66,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib1","SARS-CoV-2","TCACAACACTTTCTAT",8,72.84,10.05,-0.71,0.06,2.69,1.01,0,">1 nonsynonymous","D97N Y178I",2
"lib1","SARS-CoV-2","TCACAACATTTGGCAA",17,355.07,10.79,0.02,0.08,2.9,1.06,0,"1 nonsynonymous","N1T",1
"lib1","SARS-CoV-2","TCACAACCTCAGCTCC",1,22.71,8.05,-2.71,0.38,1.5,1.18,0.05,">1 nonsynonymous","S29N V37R F47Y S139Q V181L",5
"lib1","SARS-CoV-2","TCACAACCTCCATACG",6,89.65,6.43,-4.34,0.6,1.5,1.16,0.04,">1 nonsynonymous","R136N Y143Q",2
"lib1","SARS-CoV-2","TCACAACCTCCTGCGC",14,4.38,NA,NA,NA,NA,NA,NA,"stop","D97L I104* F167C",3
"lib1","SARS-CoV-2","TCACAACGATAAAAAG",7,70.17,10.71,-0.06,0.05,2.91,1.08,0,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","TCACAACTACTTTAAC",8,47.6,7.18,-3.59,0.23,1.66,1.18,0.01,">1 nonsynonymous","S69K R127K",2
"lib1","SARS-CoV-2","TCACAACTATCAGACA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","S43* V52W D90R K128A",4
"lib1","SARS-CoV-2","TCACAACTTAAGCCGA",1,51.77,10.46,-0.3,0.05,2.84,1.06,0,">1 nonsynonymous","N64L S129I",2
"lib1","SARS-CoV-2","TCACAACTTCCGCTTA",12,194.04,10.07,-0.69,0.03,2.86,1.02,0,">1 nonsynonymous","N120R Q144T V153D V173R",4
"lib1","SARS-CoV-2","TCACAAGACGGCATCT",5,75.2,10.16,-0.6,0.09,2.65,1.03,0,">1 nonsynonymous","R27K I88L G146S",3
"lib1","SARS-CoV-2","TCACAAGACTCATAGA",2,19.69,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F12R S108F G166H",3
"lib1","SARS-CoV-2","TCACAAGAGACCGAAC",3,9.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43W C49V T55F T201R",4
"lib1","SARS-CoV-2","TCACAAGATACGTCAT",2,14.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A T46C A190T",3
"lib1","SARS-CoV-2","TCACAAGCAGCCGGTC",1,0.69,NA,NA,NA,NA,NA,NA,"stop","L38G C49*",2
"lib1","SARS-CoV-2","TCACAAGCGCAAAACC",5,96.16,10.79,0.03,0.05,2.88,1.07,0,"1 nonsynonymous","P54E",1
"lib1","SARS-CoV-2","TCACAAGCTGCACAAG",3,12.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N1S G101S",2
"lib1","SARS-CoV-2","TCACAAGCTGCTTACC",13,157.05,10.49,-0.27,0.04,2.83,1.01,0,">1 nonsynonymous","T46L D90L",2
"lib1","SARS-CoV-2","TCACAAGGACAGAGAT",2,78.98,10.8,0.04,0.09,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACAAGGGATTGTAT",2,1832.89,9.96,-0.8,0.04,2.9,1.02,0,"1 nonsynonymous","K87E",1
"lib1","SARS-CoV-2","TCACAAGTTAACAGGG",3,54.24,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L95R E141T P149Q",3
"lib1","SARS-CoV-2","TCACAATAAATTACTT",7,93.74,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55S A81D N107L E135L F156I",5
"lib1","SARS-CoV-2","TCACAATACAGGGCAA",6,52.01,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G83I K128I V181N A190Y S200A",5
"lib1","SARS-CoV-2","TCACAATATCGCCGAA",5,13.98,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","I2P R25I K87T P149R G174F",5
"lib1","SARS-CoV-2","TCACAATCACATAATA",12,269.92,10.84,0.08,0.07,2.88,1.04,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","TCACAATCATTCCGAA",10,7.78,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T15Q Y123P E135F V182S",4
"lib1","SARS-CoV-2","TCACAATCATTTAGTA",8,89.57,10.42,-0.34,0.05,2.89,1.02,0,">1 nonsynonymous","A14V I138V",2
"lib1","SARS-CoV-2","TCACAATCCTCCTGCG",2,37.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68T K114R P169M",3
"lib1","SARS-CoV-2","TCACAATCCTTACCCT",1,15.41,9.14,-1.62,0.32,2.2,1.22,0.02,">1 nonsynonymous","N110M Y121T",2
"lib1","SARS-CoV-2","TCACAATGACCACATG",5,68.8,10.86,0.1,0.09,2.9,1.04,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TCACAATGGAAATTCC",1,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15P",1
"lib1","SARS-CoV-2","TCACAATTTAGATGAA",3,32.81,9.97,-0.79,0.14,2.19,1.02,0.01,">1 nonsynonymous","G51M D98Q",2
"lib1","SARS-CoV-2","TCACACAAAAACCGAA",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45H G51C G83L",3
"lib1","SARS-CoV-2","TCACACAAAATACCTT",2,1.13,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCACACAAGAACTCAG",11,73.01,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12D D68E D98Y R136G",4
"lib1","SARS-CoV-2","TCACACAAGGATGCCT",1,27.47,10.47,-0.3,0.07,2.9,1.05,0,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","TCACACACCGAAACGT",8,33.91,6,-4.76,2,2.26,1.07,0,">1 nonsynonymous","A81F F99D P149Q",3
"lib1","SARS-CoV-2","TCACACACCTATTGAC",3,64.09,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8S K48V G83M R127N I138T P149F",6
"lib1","SARS-CoV-2","TCACACACCTGCACAC",1,11.59,9.58,-1.19,0.39,2.25,1.11,0.08,">1 nonsynonymous","V52L T148F Y178F",3
"lib1","SARS-CoV-2","TCACACACTCACCGAT",8,88.37,10.47,-0.29,0.05,2.89,1.01,0,"1 nonsynonymous","V181I",1
"lib1","SARS-CoV-2","TCACACACTCTGAGTC",3,27.49,7.29,-3.48,0.38,1.5,1.08,0.03,">1 nonsynonymous","G74C W106M F156L K199E",4
"lib1","SARS-CoV-2","TCACACAGGCTATACG",7,43.32,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V20E K56G N130Y R179T",4
"lib1","SARS-CoV-2","TCACACAGTTTAAAAC",2,76.71,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D68V F160C F167V A192S K198S",5
"lib1","SARS-CoV-2","TCACACATCAAGCGCC",4,35.9,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","G51D G86N R136L P161Q",4
"lib1","SARS-CoV-2","TCACACATTAACGGCA",4,17.67,10.87,0.1,0.09,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACACATTCTCCCAC",5,38.94,10.54,-0.22,0.07,2.91,1.03,0,">1 nonsynonymous","S43R T55S T100I R136Q S147L",5
"lib1","SARS-CoV-2","TCACACCAAAACTCAC",17,120.93,7.58,-3.18,0.27,1.5,1.11,0.02,"1 nonsynonymous","D137L",1
"lib1","SARS-CoV-2","TCACACCAAACTGTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","N58* A89K F99T N120P G152L",5
"lib1","SARS-CoV-2","TCACACCAAAGACTAG",10,97.07,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N40A N107C G116Y N130K F167L",5
"lib1","SARS-CoV-2","TCACACCATATCTACA",5,6.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15G Y35F R127H P169M",4
"lib1","SARS-CoV-2","TCACACCTCAAACATC",4,31.66,6,-4.76,1.06,1.5,1.1,0.01,">1 nonsynonymous","S29K N92P D137G P191C",4
"lib1","SARS-CoV-2","TCACACCTCCATGCTG",6,163.34,10.03,-0.74,0.09,2.71,1.05,0,">1 nonsynonymous","V52L P161S",2
"lib1","SARS-CoV-2","TCACACGAGAAATCGT",3,62.16,9.54,-1.23,0.09,2.79,1.13,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","TCACACGATCCCAGAG",4,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57I P82I L95D P96T C102T",5
"lib1","SARS-CoV-2","TCACACGGTGATTTCG",3,56.09,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","L111H G116R Y143P P149L",4
"lib1","SARS-CoV-2","TCACACGTAATACAAT",10,74.39,10.47,-0.3,0.05,2.89,1.04,0,">1 nonsynonymous","A42F E141M",2
"lib1","SARS-CoV-2","TCACACGTCGAAATGA",3,170.45,10,-0.76,0.07,2.33,1.03,0,">1 nonsynonymous","Y35M L131F",2
"lib1","SARS-CoV-2","TCACACGTCTGGTCGT",8,71.29,10.13,-0.64,0.05,2.84,1.05,0,">1 nonsynonymous","S41L N120L E154I",3
"lib1","SARS-CoV-2","TCACACGTGACCATAT",9,217.68,9.32,-1.45,0.07,2.72,1.12,0,">1 nonsynonymous","N130R G155L G174Q",3
"lib1","SARS-CoV-2","TCACACTAGTTAAAGT",6,124.55,10.27,-0.49,0.04,2.91,1.03,0,">1 nonsynonymous","R27P D59G",2
"lib1","SARS-CoV-2","TCACACTCAATGCCGT",3,100.71,8.27,-2.49,0.18,2.01,1.1,0.01,">1 nonsynonymous","F12G K87V I142P T201I",4
"lib1","SARS-CoV-2","TCACACTCCAATGTCC",5,33.04,6,-4.76,1.32,2.55,1.22,0.01,">1 nonsynonymous","I28M G83V Y93G",3
"lib1","SARS-CoV-2","TCACACTCGATTCTTT",7,116.86,10.48,-0.28,0.04,2.92,1.03,0,">1 nonsynonymous","T15R S200C",2
"lib1","SARS-CoV-2","TCACACTCTAGACAAA",4,27.7,10.3,-0.46,0.09,2.96,1.01,0,"1 nonsynonymous","N30T",1
"lib1","SARS-CoV-2","TCACACTGCATTAGGC",7,67.21,10.83,0.07,0.08,2.89,1.04,0,"1 nonsynonymous","T140R",1
"lib1","SARS-CoV-2","TCACAGAAGATTTATG",5,313.39,9.75,-1.01,0.05,2.3,1.08,0,">1 nonsynonymous","Y123S V173S",2
"lib1","SARS-CoV-2","TCACAGAATAACAACT",1,11.96,10.81,0.04,0.19,2.86,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCACAGAGATAACATA",7,120.9,10.75,-0.01,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACAGATCAAGATAG",6,121.86,8.67,-2.1,0.11,2.82,1.07,0.01,">1 nonsynonymous","Q144C C150F",2
"lib1","SARS-CoV-2","TCACAGCAACACAGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","T15A K128I N151*",3
"lib1","SARS-CoV-2","TCACAGCCGCTTGTAA",2,74.66,10.31,-0.45,0.06,2.89,1.05,0,">1 nonsynonymous","L5A I28F L122T P169M",4
"lib1","SARS-CoV-2","TCACAGCTGTTAGCTG",3,37.46,9.92,-0.84,0.11,2.03,1.06,0.01,">1 nonsynonymous","L5K A33C W106L",3
"lib1","SARS-CoV-2","TCACAGCTTTCAGTTT",8,1.96,NA,NA,NA,NA,NA,NA,"stop","T15D Y35D D68E V77* K87S F99S",6
"lib1","SARS-CoV-2","TCACAGGAAAGGTAAA",5,14.89,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C6L F99N P149N",3
"lib1","SARS-CoV-2","TCACAGGATCTATTAA",1,5.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N64E N107M K114L P149L C158I",5
"lib1","SARS-CoV-2","TCACAGGCCAAAATAA",1,4.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72M",1
"lib1","SARS-CoV-2","TCACAGGCTTATAGGA",2,6.42,6.27,-4.49,0.7,3,1.2,0.01,">1 nonsynonymous","V71S V103N G116V K128A",4
"lib1","SARS-CoV-2","TCACAGGTTGATCATT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","F17L G74F D112* S184I",4
"lib1","SARS-CoV-2","TCACAGTGCGGGATAC",1,7.28,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N13M S45K N64I P96I F126L I138T",6
"lib1","SARS-CoV-2","TCACAGTTCAACCCTC",6,73.45,8.32,-2.44,0.29,1.5,1,0.04,"1 nonsynonymous","L131K",1
"lib1","SARS-CoV-2","TCACATAACACACCGG",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43C T100P R179W",3
"lib1","SARS-CoV-2","TCACATAACATACCAC",2,16.93,6.65,-4.11,0.38,2.6,1.21,0.02,">1 nonsynonymous","V20M N107L R136A",3
"lib1","SARS-CoV-2","TCACATAACCCTCTAC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","C6R S41* G152L",3
"lib1","SARS-CoV-2","TCACATAATTACATTA",12,141.52,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61K L95G S184R",3
"lib1","SARS-CoV-2","TCACATACAAGACTCT",2,17.16,10.88,0.11,0.11,2.92,1,0.01,">1 nonsynonymous","K56T P149V N171W K199I",4
"lib1","SARS-CoV-2","TCACATACACAACGCA",1,57.82,10.73,-0.03,0.08,2.87,1.07,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","TCACATACCAGATGAC",1,39.6,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4Q G83I D137A",3
"lib1","SARS-CoV-2","TCACATAGCTACACTT",5,0.05,NA,NA,NA,NA,NA,NA,"stop","G9R E10* S19G V52N D68K",5
"lib1","SARS-CoV-2","TCACATATAACGATGT",4,22.08,6.54,-4.23,0.54,1.76,1.2,0.03,"1 nonsynonymous","G101D",1
"lib1","SARS-CoV-2","TCACATATAAGAGAAA",1,7.19,6.48,-4.28,0.6,1.5,1.3,0.04,">1 nonsynonymous","Y66R K87A P161E T201S",4
"lib1","SARS-CoV-2","TCACATATACGTAGTC",4,47.03,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","T3M W23G L122D D137L",4
"lib1","SARS-CoV-2","TCACATATCGGGGATA",6,76.53,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19Q F44G Y91S C102D N157H",5
"lib1","SARS-CoV-2","TCACATCAACTTTTAT",5,2.39,NA,NA,NA,NA,NA,NA,"stop","L5R S45I P82*",3
"lib1","SARS-CoV-2","TCACATCACCACAGAC",11,10.95,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1S T15F I28L T85V E141M E186P",6
"lib1","SARS-CoV-2","TCACATCACCTTAGAA",1,32.09,10.11,-0.66,0.15,2.58,1.01,0.01,">1 nonsynonymous","R16K S19C I104L E141K",4
"lib1","SARS-CoV-2","TCACATCACGCTCGAA",2,56.67,10.77,0,0.1,2.91,1,0,">1 nonsynonymous","N4Q G83N",2
"lib1","SARS-CoV-2","TCACATCATGAGTATC",10,120.22,10.73,-0.04,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACATCCACCTGCTA",2,15.99,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","TCACATCCCTATGTAT",1,83.26,8.6,-2.17,0.1,2.93,1.08,0,"1 nonsynonymous","Y159I",1
"lib1","SARS-CoV-2","TCACATCCTACGTACG",3,1.26,NA,NA,NA,NA,NA,NA,"stop","I2R C61M F99T S113* L125E",5
"lib1","SARS-CoV-2","TCACATCCTTACACGA",2,25.17,6,-4.76,0.91,3,1.17,0.01,">1 nonsynonymous","V32Q T100L C150P",3
"lib1","SARS-CoV-2","TCACATCGCGACGGAT",1,13.64,10.13,-0.63,0.16,2.64,1.04,0.02,">1 nonsynonymous","V115L F167Y",2
"lib1","SARS-CoV-2","TCACATCGTAATAATG",1,41.14,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V103L Q176A",2
"lib1","SARS-CoV-2","TCACATCTTGCTCTTG",7,169.58,10.78,0.01,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACATGCACATAGTT",3,0.26,NA,NA,NA,NA,NA,NA,"stop","N64F G86I N92* Y119R K132V A190S",6
"lib1","SARS-CoV-2","TCACATGGCATTCATA",5,151.05,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","W23A I72N P82C P177V",4
"lib1","SARS-CoV-2","TCACATGGTCGCCGGA",2,61.01,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64I G83P Y165R Y175N",4
"lib1","SARS-CoV-2","TCACATGTTTAACGAT",2,64.56,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","P82V C102L C158M",3
"lib1","SARS-CoV-2","TCACATTAAACTGATA",6,26.63,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S43K Y93C G152L V173F",4
"lib1","SARS-CoV-2","TCACATTACAAACACA",6,10.1,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N1K D90P E141S",3
"lib1","SARS-CoV-2","TCACATTAGACACCAC",6,60.22,10.63,-0.13,0.04,2.97,1,0,">1 nonsynonymous","G9N F62Y I104V N151T",4
"lib1","SARS-CoV-2","TCACATTAGTCAATTG",3,28.02,6.18,-4.58,0.38,1.5,1.12,0.01,">1 nonsynonymous","R16L S45D P54S Y66P",4
"lib1","SARS-CoV-2","TCACATTCGAAAAGAA",4,17.69,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","R78H C102H S139R",3
"lib1","SARS-CoV-2","TCACCAAATACAAAGC",2,48.84,10.57,-0.19,0.04,2.97,1,0,">1 nonsynonymous","P7L K114W L122E I138T",4
"lib1","SARS-CoV-2","TCACCAAATATCCATT",2,250.1,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y121R Q176S",2
"lib1","SARS-CoV-2","TCACCAAATGAATACT",3,191.4,10.04,-0.73,0.05,2.91,1.03,0,">1 nonsynonymous","N118T T201D",2
"lib1","SARS-CoV-2","TCACCAAATGTTAGCC",1,1.39,NA,NA,NA,NA,NA,NA,"stop","D34L K56I G86I P149*",4
"lib1","SARS-CoV-2","TCACCAACGAGCACTG",3,8.62,7.28,-3.48,0.29,3,1.13,0.01,">1 nonsynonymous","Y39I L125K",2
"lib1","SARS-CoV-2","TCACCAACGATGCGTT",5,104.82,6,-4.76,2,3,1.15,0,">1 nonsynonymous","K87R N92Y R127L P169K",4
"lib1","SARS-CoV-2","TCACCAACGGCTAAAT",4,68.69,10.26,-0.51,0.09,2.93,1.06,0,">1 nonsynonymous","N109I V194A",2
"lib1","SARS-CoV-2","TCACCAAGTAATGATT",1,41.38,7.32,-3.44,0.3,1.5,1.17,0.03,">1 nonsynonymous","Y35S D68E F160R",3
"lib1","SARS-CoV-2","TCACCAAGTAATTAAT",1,10.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14F G86K D98C T201M",4
"lib1","SARS-CoV-2","TCACCAATACCGATTA",9,121.94,10.75,-0.01,0.05,2.94,1.01,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TCACCAATGTTAGTTT",10,92.71,10.59,-0.17,0.06,2.95,1,0,"1 nonsynonymous","A22G",1
"lib1","SARS-CoV-2","TCACCACAAAACATAA",1,28.52,10.82,0.06,0.1,2.92,1.07,0,">1 nonsynonymous","I2N T15S",2
"lib1","SARS-CoV-2","TCACCACACCGCACCA",1,52.03,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y35E F47V V52L W106G G117C S139N",6
"lib1","SARS-CoV-2","TCACCACAGAGGTGTA",10,15.15,6.12,-4.64,2,1.5,1.28,0.05,">1 nonsynonymous","L5S N13G A105E",3
"lib1","SARS-CoV-2","TCACCACATAACTAAA",2,20.34,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V37T C49Y N64L D90Y F167Y",5
"lib1","SARS-CoV-2","TCACCACGAAACTGCC",2,10.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3R L38P S113E",3
"lib1","SARS-CoV-2","TCACCAGAACAAATAA",7,50.73,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G9L Y39C F99E L122F N130S",5
"lib1","SARS-CoV-2","TCACCAGAATAGAACA",2,28.52,9.45,-1.31,0.12,2.67,1.12,0.01,">1 nonsynonymous","R27A I104T",2
"lib1","SARS-CoV-2","TCACCAGAATCCTAAT",2,63.19,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N1I C102L G152K G174T",4
"lib1","SARS-CoV-2","TCACCAGCGAACTACA",1,38.47,10.66,-0.1,0.15,2.9,1.1,0.01,">1 nonsynonymous","N64V L122N",2
"lib1","SARS-CoV-2","TCACCAGTAATATATA",7,79.35,10.82,0.05,0.06,2.95,1.01,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","TCACCAGTTGGCACCA",4,62.05,8.98,-1.79,0.06,2.82,1.12,0,">1 nonsynonymous","C31R L125T",2
"lib1","SARS-CoV-2","TCACCATAATATTGGT",3,39.09,9.91,-0.85,0.08,2.62,1.1,0,">1 nonsynonymous","S36R G116V N130D",3
"lib1","SARS-CoV-2","TCACCATAGTGACTAA",2,1.28,NA,NA,NA,NA,NA,NA,"stop","Y21K D98*",2
"lib1","SARS-CoV-2","TCACCATATACGGGGC",8,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L S147H G196P",3
"lib1","SARS-CoV-2","TCACCATTATAACTTC",1,13.24,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","D59P F99V P177R",3
"lib1","SARS-CoV-2","TCACCATTCAACTTAA",8,422.19,9.51,-1.25,0.07,2.77,1.06,0,">1 nonsynonymous","F62A I142S",2
"lib1","SARS-CoV-2","TCACCATTGCAATAGA",1,43.09,10.66,-0.1,0.07,2.9,1.09,0,"1 nonsynonymous","C61R",1
"lib1","SARS-CoV-2","TCACCCAAATATGGAG",20,305.36,10.65,-0.12,0.05,2.9,1.04,0,"1 nonsynonymous","A18Y",1
"lib1","SARS-CoV-2","TCACCCAACGAACAGG",7,28.06,6.15,-4.62,0.99,1.5,1.25,0.04,">1 nonsynonymous","F8E T85M Y143N",3
"lib1","SARS-CoV-2","TCACCCAACGTTAGGA",2,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R F99I G166K",3
"lib1","SARS-CoV-2","TCACCCACCCGGCAAT",8,79.74,8.34,-2.43,0.18,2.04,1.08,0.01,">1 nonsynonymous","F12V S45R Y159F",3
"lib1","SARS-CoV-2","TCACCCAGACAAAAAT",5,65.64,10.75,-0.01,0.04,2.93,1.04,0,"1 nonsynonymous","N40R",1
"lib1","SARS-CoV-2","TCACCCAGCCAGCTAT",1,30.26,10.72,-0.04,0.11,2.89,1.12,0,"1 nonsynonymous","S36E",1
"lib1","SARS-CoV-2","TCACCCAGGATCACAC",2,94.06,10.2,-0.57,0.06,2.6,1,0,">1 nonsynonymous","S43F R136W",2
"lib1","SARS-CoV-2","TCACCCCTAACTATCA",4,43.9,10.21,-0.55,0.1,2.75,1.02,0,">1 nonsynonymous","N64P T85D K128P",3
"lib1","SARS-CoV-2","TCACCCCTAGCTCGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","V77K P82L L122*",3
"lib1","SARS-CoV-2","TCACCCGACCATCAAT",8,35.46,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2D K56G N92F Y143W",4
"lib1","SARS-CoV-2","TCACCCGAGCTAAATT",1,67.22,9.67,-1.1,0.08,2.41,1.09,0,">1 nonsynonymous","T85L N109G",2
"lib1","SARS-CoV-2","TCACCCGCCGCAACAC",4,22.79,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34H D112N Y119D",3
"lib1","SARS-CoV-2","TCACCCGGCAGTGAAA",3,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E N13F Y50I D137R F160R S200Y",6
"lib1","SARS-CoV-2","TCACCCGGCTCAATTT",4,7.56,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","D90L R124G",2
"lib1","SARS-CoV-2","TCACCCGTATACTCCA",10,90.55,10.2,-0.56,0.07,2.77,1.01,0,"1 nonsynonymous","D34T",1
"lib1","SARS-CoV-2","TCACCCTCAGTTTAGA",7,2.51,NA,NA,NA,NA,NA,NA,"stop","D90* T148K",2
"lib1","SARS-CoV-2","TCACCCTCTAATCAGT",3,34.36,9.55,-1.21,0.11,2.13,1.06,0.01,">1 nonsynonymous","C6P G146A",2
"lib1","SARS-CoV-2","TCACCCTTAAAAATCT",5,209.34,10.58,-0.19,0.03,2.89,1.05,0,">1 nonsynonymous","T3E C61W L122H K199W",4
"lib1","SARS-CoV-2","TCACCCTTCCATCAAC",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W F126K K199Y",3
"lib1","SARS-CoV-2","TCACCGAAGTCTGGAT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112M E186I",2
"lib1","SARS-CoV-2","TCACCGAATCAAACCT",9,73.68,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F44C D68L P82S Y121V K128S F156V",6
"lib1","SARS-CoV-2","TCACCGACTCATGTCT",1,12.07,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y93P T100Y",2
"lib1","SARS-CoV-2","TCACCGCCGAGACTAT",3,30.61,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y35S K94M Q176L",3
"lib1","SARS-CoV-2","TCACCGCGAATGAGAT",2,21.24,10.66,-0.11,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACCGCTTTTAGGTA",1,27.33,6.32,-4.45,1.03,1.5,1.27,0.05,">1 nonsynonymous","S19P Y50R K56L K94C Y175I",5
"lib1","SARS-CoV-2","TCACCGGGGAGGTTTG",11,143.92,10.65,-0.11,0.05,2.93,1.04,0,">1 nonsynonymous","N120L H189R",2
"lib1","SARS-CoV-2","TCACCGTATGAGAATA",13,326.4,9.91,-0.85,0.07,2.01,1.03,0,">1 nonsynonymous","V37N V103T",2
"lib1","SARS-CoV-2","TCACCGTTCGGCAAAA",10,13.19,6,-4.76,1.09,3,1.24,0.01,">1 nonsynonymous","N13R T55C K94C S139F Y159G",5
"lib1","SARS-CoV-2","TCACCTAGGAACCGCA",1,7.83,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","L5F T55N V77N R124G S147F",5
"lib1","SARS-CoV-2","TCACCTATCTTTTATA",2,12.46,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","E10P F62I F99A S113E",4
"lib1","SARS-CoV-2","TCACCTATTTGAAATA",1,33.83,10.18,-0.59,0.09,2.7,1.04,0.01,">1 nonsynonymous","N13R L95V",2
"lib1","SARS-CoV-2","TCACCTCAAATTCCGG",6,11.68,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","D34I F99N",2
"lib1","SARS-CoV-2","TCACCTCAATGCCCCA",17,171.48,9.09,-1.67,0.07,2.77,1.13,0,">1 nonsynonymous","S45P V65I N118G",3
"lib1","SARS-CoV-2","TCACCTCCTGAGTAAC",1,16.93,7.64,-3.13,0.19,1.85,1.12,0.01,">1 nonsynonymous","A14T N107S P169Q",3
"lib1","SARS-CoV-2","TCACCTCTGCATTTAT",2,12.28,6.15,-4.61,2,3,1.05,0,">1 nonsynonymous","A33M R73G N118I A190Y",4
"lib1","SARS-CoV-2","TCACCTCTTTATCGCA",13,1.36,NA,NA,NA,NA,NA,NA,"stop","V20L P54K D97* L111P T148I C158V G174H",7
"lib1","SARS-CoV-2","TCACCTTATACCAATT",8,52.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72G D98T N157G",3
"lib1","SARS-CoV-2","TCACCTTGCCAAGCTA",1,19.39,6.27,-4.5,0.62,1.5,1.12,0.02,">1 nonsynonymous","I28T D112L",2
"lib1","SARS-CoV-2","TCACCTTGGTATTGCT",6,63.25,10.76,-0.01,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACGAAACACAGACA",3,25.17,6,-4.76,2,2.05,1.21,0.01,">1 nonsynonymous","N30S V65E L95R W106V",4
"lib1","SARS-CoV-2","TCACGAAACCCGGGGT",13,48.88,6.02,-4.74,1.25,1.5,1.17,0.03,">1 nonsynonymous","D75P N118I I142F T148M",4
"lib1","SARS-CoV-2","TCACGAAAGTCATCCT",3,11.36,10.23,-0.53,0.14,2.13,1.02,0,">1 nonsynonymous","D90N P133R",2
"lib1","SARS-CoV-2","TCACGAAATAAACCAG",1,2.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160P",1
"lib1","SARS-CoV-2","TCACGAAATGAACTTC",3,151.32,10.82,0.05,0.07,2.92,1.02,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","TCACGAACAGAAGTAC",3,19.71,10.28,-0.49,0.1,2.79,1.12,0,"1 nonsynonymous","P7W",1
"lib1","SARS-CoV-2","TCACGAACAGCTAACA",4,5.68,6.67,-4.09,2,3,1.19,0.01,">1 nonsynonymous","D34S Y50T N151K",3
"lib1","SARS-CoV-2","TCACGAACATTCTGAT",5,8.68,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61E K114M N120C E154G P161S G166I",6
"lib1","SARS-CoV-2","TCACGAAGACATAGGG",5,59.44,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N24I F62T K94E E141L P149I",5
"lib1","SARS-CoV-2","TCACGAAGCTATTAAA",3,62.58,6.53,-4.23,0.52,1.5,1.21,0.02,">1 nonsynonymous","I28Y A81N Y121I P169L",4
"lib1","SARS-CoV-2","TCACGAAGTATGTCTT",6,254.46,10.69,-0.07,0.04,2.84,1.06,0,">1 nonsynonymous","S41T T46I",2
"lib1","SARS-CoV-2","TCACGAATAACATCAA",2,33.15,10.01,-0.76,0.09,2.8,1,0,">1 nonsynonymous","K56H C61R G152V",3
"lib1","SARS-CoV-2","TCACGAATAATACGCT",3,83.52,10.5,-0.26,0.05,2.88,1.06,0,">1 nonsynonymous","L38M P149Q",2
"lib1","SARS-CoV-2","TCACGAATCTCATATA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","L5* C49M T85G",3
"lib1","SARS-CoV-2","TCACGAATTCTAGACC",2,25.02,9.95,-0.82,0.08,2.69,1.05,0,">1 nonsynonymous","F12L C31V V37D",3
"lib1","SARS-CoV-2","TCACGAATTTACTTGT",4,401.28,7.67,-3.1,0.11,1.69,1.12,0,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","TCACGACAACTACCAG",4,42.89,10.59,-0.18,0.06,2.9,1.09,0,"1 nonsynonymous","T63D",1
"lib1","SARS-CoV-2","TCACGACACGAAATAA",6,66.63,10.21,-0.56,0.05,2.85,1.02,0,"1 nonsynonymous","G155Y",1
"lib1","SARS-CoV-2","TCACGACAGGCCACCG",5,87.63,9.64,-1.12,0.11,1.98,1.12,0.01,">1 nonsynonymous","T15K D98S Y121I K128N",4
"lib1","SARS-CoV-2","TCACGACAGTATCATT",4,0.67,NA,NA,NA,NA,NA,NA,"stop","C49* Y121L",2
"lib1","SARS-CoV-2","TCACGACATTAAATCG",2,19.1,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K56G D112K Y119T",3
"lib1","SARS-CoV-2","TCACGACCCCTGACAA",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K V11N G155S L183Y",4
"lib1","SARS-CoV-2","TCACGAGACAATGCCT",6,24.14,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F99C F185E",2
"lib1","SARS-CoV-2","TCACGAGAGATTCAAA",8,120.82,10.46,-0.3,0.03,2.87,1.06,0,">1 nonsynonymous","S41M N151I V173L",3
"lib1","SARS-CoV-2","TCACGAGCCGGGCCAA",3,34.17,8.59,-2.18,0.3,1.5,1.06,0.04,">1 nonsynonymous","T55M V103A",2
"lib1","SARS-CoV-2","TCACGATCCACGTTTT",2,17.14,6.2,-4.56,0.82,2.29,1.35,0.03,">1 nonsynonymous","S41L P133L C158K",3
"lib1","SARS-CoV-2","TCACGATGTTACTTTG",5,0.14,NA,NA,NA,NA,NA,NA,"stop","S36* N110R",2
"lib1","SARS-CoV-2","TCACGATTATTTCTTA",1,46.27,10.56,-0.2,0.05,2.91,1.04,0,">1 nonsynonymous","S41Y T63D S147G S184V",4
"lib1","SARS-CoV-2","TCACGCAAAACACAAA",5,45.31,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I80S Q176L V181L",3
"lib1","SARS-CoV-2","TCACGCAAAGAAACGC",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N P54R A81C G86L V182L",5
"lib1","SARS-CoV-2","TCACGCAAATCGTACT",9,77.66,10.71,-0.05,0.08,2.89,1.08,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","TCACGCAACCCCAATG",6,110.14,10.69,-0.08,0.04,2.9,1.08,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","TCACGCACAAGTAAGA",2,61.5,10.72,-0.04,0.06,2.84,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACGCACCACGCGAC",2,9.31,10.4,-0.36,0.08,3,1,0,">1 nonsynonymous","V11F N24K",2
"lib1","SARS-CoV-2","TCACGCATAACCCATT",2,21.69,6.01,-4.75,0.51,1.5,1.14,0.01,">1 nonsynonymous","D90V F99T K114L R127F",4
"lib1","SARS-CoV-2","TCACGCATATAAATAA",6,61.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M W106K I142P L162G Q176E",5
"lib1","SARS-CoV-2","TCACGCATATCCTTTA",2,40.89,10.09,-0.68,0.08,2.79,1.03,0,"1 nonsynonymous","Q144L",1
"lib1","SARS-CoV-2","TCACGCATCTTACCAC",8,138.37,10.5,-0.26,0.04,2.9,1.05,0,">1 nonsynonymous","V37A Y91H",2
"lib1","SARS-CoV-2","TCACGCCCAAACATAA",5,118.06,9.01,-1.76,0.08,2.57,1.13,0,">1 nonsynonymous","F62G S139G N171E",3
"lib1","SARS-CoV-2","TCACGCCCGTTAAAAT",2,63.22,10.54,-0.22,0.06,2.86,1.05,0,">1 nonsynonymous","T15R K128A",2
"lib1","SARS-CoV-2","TCACGCCGTTTGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43C Q84S L95R N107L L122* N171K",6
"lib1","SARS-CoV-2","TCACGCGATCCACCGA",1,35.68,8.17,-2.6,0.18,1.73,1.16,0.01,">1 nonsynonymous","N107D N118Q",2
"lib1","SARS-CoV-2","TCACGCGCAAAATTCA",7,182.53,7.75,-3.01,0.11,2.04,1.13,0,"1 nonsynonymous","Y175E",1
"lib1","SARS-CoV-2","TCACGCGCAACTACCC",4,23.32,9.1,-1.66,0.2,1.75,1.12,0.02,">1 nonsynonymous","W23G I28Y",2
"lib1","SARS-CoV-2","TCACGCGCGCACATGT",10,110.64,10.76,-0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACGCGCGTTCAATA",3,90.2,10.15,-0.62,0.05,2.9,1,0,">1 nonsynonymous","G9R A18H F156I",3
"lib1","SARS-CoV-2","TCACGCGCTGTACGTA",1,7.74,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I80Q K132N",2
"lib1","SARS-CoV-2","TCACGCGTATAAAGTG",5,73.81,10.75,-0.02,0.05,2.9,1.05,0,"1 nonsynonymous","L60E",1
"lib1","SARS-CoV-2","TCACGCTATTATACGG",3,47.3,10.69,-0.07,0.09,2.84,1.01,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TCACGCTGCCCAACTT",5,96.83,10.52,-0.24,0.07,2.9,1,0,">1 nonsynonymous","N40D D59C",2
"lib1","SARS-CoV-2","TCACGGAACCCAAAAG",2,16.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64T A105E",2
"lib1","SARS-CoV-2","TCACGGAGCCCACCCT",10,93.43,10.61,-0.16,0.02,2.91,1.04,0,">1 nonsynonymous","N1T S41R",2
"lib1","SARS-CoV-2","TCACGGAGTATAGCAC",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101H G116D",2
"lib1","SARS-CoV-2","TCACGGCAAGCCTCCA",5,107.46,10.17,-0.59,0.05,2.93,1,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","TCACGGCTCATAAAAG",3,130,10.61,-0.15,0.04,2.9,1.06,0,"1 nonsynonymous","G116R",1
"lib1","SARS-CoV-2","TCACGGGAAACAAAAT",1,19.97,10.49,-0.27,0.11,2.71,1.06,0,">1 nonsynonymous","G9P G83Y",2
"lib1","SARS-CoV-2","TCACGGGATGCTGGCA",6,31.45,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","E10Q N92K Y121P E154W",4
"lib1","SARS-CoV-2","TCACGTCAACACGAGA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S C49T L57V E76D L95F S113R N118I R127V P149M",9
"lib1","SARS-CoV-2","TCACGTCACGATAGAA",1,16.4,6.24,-4.52,0.41,3,1.11,0.01,">1 nonsynonymous","L5W A14E G51R I88R",4
"lib1","SARS-CoV-2","TCACGTCCCAATTACA",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y N40L C61L Y93S E154A G166R",6
"lib1","SARS-CoV-2","TCACGTCCCGAATGCA",1,32.81,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N107F F167T",2
"lib1","SARS-CoV-2","TCACGTCTAAATTCGT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","T55C N64R G83S K87H I104K K114*",6
"lib1","SARS-CoV-2","TCACGTCTATGAGTAT",1,15.39,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","A42C V77R K94H E141P L162E",5
"lib1","SARS-CoV-2","TCACGTCTTAAGATAA",2,7.98,6.86,-3.91,0.47,1.5,1.08,0.05,">1 nonsynonymous","G9A L57V P96Y S129Q",4
"lib1","SARS-CoV-2","TCACGTCTTGAACTGA",2,28.64,10.82,0.06,0.08,2.91,1.01,0,"1 nonsynonymous","E141V",1
"lib1","SARS-CoV-2","TCACGTGAAATAGAAA",9,51.43,8.54,-2.22,0.23,1.5,1.05,0.02,">1 nonsynonymous","V71S D90N",2
"lib1","SARS-CoV-2","TCACGTGAATAATAAC",4,31.3,6.34,-4.43,0.49,1.5,1.21,0.02,">1 nonsynonymous","N1E G86S D98M",3
"lib1","SARS-CoV-2","TCACGTGAGTAAATGA",3,5.95,9.36,-1.4,0.22,2.9,1.12,0.01,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","TCACGTTACCGAATCG",1,44.37,10,-0.77,0.09,2.58,1.05,0,">1 nonsynonymous","L60T S139K",2
"lib1","SARS-CoV-2","TCACGTTATAATGTCC",1,50.24,10.81,0.05,0.08,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACGTTCAACCAGGG",7,34.75,7.05,-3.71,0.54,1.5,1.08,0.05,">1 nonsynonymous","I2Y N64E F99A P197T",4
"lib1","SARS-CoV-2","TCACGTTTACAAATTA",10,70.69,10.69,-0.08,0.09,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTAAAAAAAGCTT",1,61.2,9.74,-1.03,0.09,1.94,1.01,0,">1 nonsynonymous","V11D D90N K128S",3
"lib1","SARS-CoV-2","TCACTAAACGGACACG",2,22.3,6.86,-3.91,0.45,1.79,1.14,0.03,">1 nonsynonymous","F62V G74A K87V D90I N120C T148I P161L",7
"lib1","SARS-CoV-2","TCACTAAAGTCTTCAA",3,19.26,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V32L Y39S K87M P177I",4
"lib1","SARS-CoV-2","TCACTAAATAATTGGT",2,2.23,NA,NA,NA,NA,NA,NA,"stop","F12* Y35L K114L L162S T201R",5
"lib1","SARS-CoV-2","TCACTAACAACAGACG",1,85.35,10.77,0.01,0.03,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTAACACGCCTCA",2,51.86,10.71,-0.05,0.09,2.95,1.04,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","TCACTAACCAGCCAAT",8,47.96,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","N58I G101H G117K Y165V",4
"lib1","SARS-CoV-2","TCACTAATTAAACTGA",11,164.05,10.73,-0.04,0.04,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTAATTTTACTAG",2,26.43,10.59,-0.17,0.06,2.92,1.06,0,">1 nonsynonymous","I2D S36M S43Y",3
"lib1","SARS-CoV-2","TCACTAATTTTGCACG",6,119.93,10.8,0.03,0.08,2.88,1.07,0,"1 nonsynonymous","K56S",1
"lib1","SARS-CoV-2","TCACTACAAAAACAAT",1,18.49,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6F F62N N92S T100I P133V G196A",6
"lib1","SARS-CoV-2","TCACTACAAATTTAAA",2,41.47,10.45,-0.31,0.06,2.93,1,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","TCACTACAATCGCTTA",3,87.24,10.29,-0.47,0.05,2.78,1.06,0,">1 nonsynonymous","T3I N40L",2
"lib1","SARS-CoV-2","TCACTACACGAACTAA",4,59.68,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N13C G83D K94S N120T",4
"lib1","SARS-CoV-2","TCACTACAGGTCCACC",2,39.23,10.39,-0.38,0.05,2.88,1.03,0,">1 nonsynonymous","A14Q R136M",2
"lib1","SARS-CoV-2","TCACTACCCATGATTT",1,8.43,10.55,-0.22,0.09,3,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTACCGCGGTAAG",11,226.37,10.69,-0.07,0.04,2.91,1.05,0,">1 nonsynonymous","K56M L60R",2
"lib1","SARS-CoV-2","TCACTACTAGGTCTTA",4,0.72,NA,NA,NA,NA,NA,NA,"stop","D59E S200*",2
"lib1","SARS-CoV-2","TCACTAGAAAGTGAAG",7,89.74,10.5,-0.26,0.05,2.93,1.04,0,">1 nonsynonymous","Y39H C61K D97G",3
"lib1","SARS-CoV-2","TCACTAGAAGGAATTG",6,48.33,6.31,-4.45,0.41,1.5,1.11,0.01,">1 nonsynonymous","G86S A105N",2
"lib1","SARS-CoV-2","TCACTAGAAGGCATGC",2,6.42,9.71,-1.05,0.17,2.52,1.17,0.01,">1 nonsynonymous","F44C G152S",2
"lib1","SARS-CoV-2","TCACTAGCGCAAAACA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K S29R N171H",3
"lib1","SARS-CoV-2","TCACTAGGATCCCTCC",2,57.96,8.2,-2.56,0.23,1.95,1.18,0.02,">1 nonsynonymous","C6E I104V G166Q",3
"lib1","SARS-CoV-2","TCACTAGGCCGGAACA",3,21.58,9.65,-1.11,0.29,1.5,1,0.03,">1 nonsynonymous","F44L A81L",2
"lib1","SARS-CoV-2","TCACTAGGTAGAAAAA",5,0.32,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","TCACTATAAAACGCAA",1,13.76,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F17S F70V F99H E141C L187F",5
"lib1","SARS-CoV-2","TCACTATACACGACGA",2,70.89,10.63,-0.13,0.05,2.87,1.07,0,">1 nonsynonymous","N64S K128T A145V",3
"lib1","SARS-CoV-2","TCACTATAGAACAGAT",3,23.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R78C D90Y D97P N120M G146M P161G",6
"lib1","SARS-CoV-2","TCACTATATCCCCAAA",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21F F44S G86F",3
"lib1","SARS-CoV-2","TCACTATCAGCATCAA",1,31.77,10.89,0.12,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTATGGGTATTAA",4,84.33,9.47,-1.29,0.13,1.88,1.15,0.01,">1 nonsynonymous","R27P R136F",2
"lib1","SARS-CoV-2","TCACTATTAAAAATCA",5,2.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N110F",1
"lib1","SARS-CoV-2","TCACTATTAAGATGCA",1,11.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16M D59G V77M S129A P149L E154D V173F",7
"lib1","SARS-CoV-2","TCACTATTTCTACCAA",7,0.94,NA,NA,NA,NA,NA,NA,"stop","R16Q I88F D98R Q168*",4
"lib1","SARS-CoV-2","TCACTCAAAGTTTTTT",18,69.79,7.26,-3.51,0.3,1.5,1.18,0.02,">1 nonsynonymous","A42D A89M N107S",3
"lib1","SARS-CoV-2","TCACTCAAATAATCGA",1,2.79,NA,NA,NA,NA,NA,NA,"stop","W23* N92T F167L",3
"lib1","SARS-CoV-2","TCACTCAAGCCGTAAG",2,63.88,9.65,-1.12,0.15,1.81,1.1,0.01,">1 nonsynonymous","N58M I88L K132M",3
"lib1","SARS-CoV-2","TCACTCACAAACACGA",1,35.16,10.87,0.1,0.09,2.95,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TCACTCACATGCAAAA",7,81.47,9.49,-1.27,0.11,2.18,1.09,0,">1 nonsynonymous","C6E G155R",2
"lib1","SARS-CoV-2","TCACTCACATGCACAC",4,5.76,6.88,-3.88,0.71,2.32,1.1,0.01,">1 nonsynonymous","V103G I142F",2
"lib1","SARS-CoV-2","TCACTCAGCACATAAA",2,74.37,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","D98L V115N D137M P149L Y178T",5
"lib1","SARS-CoV-2","TCACTCATATGCCCAA",10,199.6,7.25,-3.51,0.15,1.8,1.2,0.01,">1 nonsynonymous","N64S C158H",2
"lib1","SARS-CoV-2","TCACTCCACTTGATGG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V E135T S184I",3
"lib1","SARS-CoV-2","TCACTCCAGAGCTCAG",6,2.15,NA,NA,NA,NA,NA,NA,"stop","R16* N40S",2
"lib1","SARS-CoV-2","TCACTCCCAATGGTAA",8,220.64,10.73,-0.03,0.04,2.91,1.06,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","TCACTCCTAGATGGTG",6,81.8,8.96,-1.8,0.11,1.7,1.14,0,">1 nonsynonymous","D90F N107R",2
"lib1","SARS-CoV-2","TCACTCGCTGTCAGTA",13,45.66,6.84,-3.92,0.39,1.5,1.23,0.02,">1 nonsynonymous","T3V R127S E135G Y143L",4
"lib1","SARS-CoV-2","TCACTCGCTTAGCTAG",1,37.55,10.77,0.01,0.11,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTCGGGCACTGGT",6,49.21,7.42,-3.34,0.38,1.5,1.12,0.05,">1 nonsynonymous","R25P N110G",2
"lib1","SARS-CoV-2","TCACTCGTAAACACAG",7,53.91,10.35,-0.41,0.06,2.81,1,0,">1 nonsynonymous","D59A D97Y V115S",3
"lib1","SARS-CoV-2","TCACTCGTTAACGGGA",6,42.49,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","A18V D68M G83Y V153Y",4
"lib1","SARS-CoV-2","TCACTCTGGAAATATG",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N G86I Y93P F99S T148D K198I",6
"lib1","SARS-CoV-2","TCACTCTTGCATGAGT",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49P L57N D68R E76A V103T F160P F167T",7
"lib1","SARS-CoV-2","TCACTGAAGTGAATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","F62* K198W",2
"lib1","SARS-CoV-2","TCACTGACCGAGGAGT",6,128.82,10.75,-0.01,0.06,2.88,1.06,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","TCACTGCACGTATCAC",5,16.88,6,-4.76,1.32,3,1.18,0.01,">1 nonsynonymous","C6I R25I G51K",3
"lib1","SARS-CoV-2","TCACTGCTAACCCCTA",2,16.04,9.05,-1.72,0.21,2.01,1.13,0.02,"1 nonsynonymous","R73V",1
"lib1","SARS-CoV-2","TCACTGCTATGAACTT",2,43.39,10.47,-0.3,0.08,2.84,1.01,0,">1 nonsynonymous","A22V S53D T63K",3
"lib1","SARS-CoV-2","TCACTGCTCATGCTCA",2,16.84,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6I V20L N92I A105M",4
"lib1","SARS-CoV-2","TCACTGGGATCTAAGT",3,111.67,10.12,-0.65,0.06,2.73,1.03,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","TCACTGGTCTGCTTGC",3,8.83,10.76,0,0.2,2.56,1.13,0.02,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","TCACTGTCAGTAAGTG",1,17.21,10.51,-0.26,0.1,2.7,1.25,0.01,"1 nonsynonymous","C61M",1
"lib1","SARS-CoV-2","TCACTGTTACGCTTTA",4,19.52,6.65,-4.12,0.25,1.5,1.11,0.01,">1 nonsynonymous","I2C C49K T55G S69K Q163H",5
"lib1","SARS-CoV-2","TCACTTAAAGCACTAC",7,215.76,9.41,-1.36,0.05,2.83,1.08,0,"1 nonsynonymous","G174V",1
"lib1","SARS-CoV-2","TCACTTAACGGAAACT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","A22* Y93R F99E Y119S R127M R179D",6
"lib1","SARS-CoV-2","TCACTTACAGCGCGGT",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L K48H R124M",3
"lib1","SARS-CoV-2","TCACTTAGCGGTGATC",2,52.21,10.22,-0.54,0.07,2.92,1,0,">1 nonsynonymous","L5W P54T Q168A G174K",4
"lib1","SARS-CoV-2","TCACTTATCTCTCCGC",4,76.56,9.57,-1.19,0.14,1.87,1.12,0.01,">1 nonsynonymous","A14Y L60T I72V N120D E141T",5
"lib1","SARS-CoV-2","TCACTTATGAGAATCA",6,106.22,9.99,-0.78,0.1,2.2,1.07,0,">1 nonsynonymous","G9S T85G N110T G146W",4
"lib1","SARS-CoV-2","TCACTTATTGAGCTGA",4,1.8,NA,NA,NA,NA,NA,NA,"stop","A89M F99T R127*",3
"lib1","SARS-CoV-2","TCACTTCAACAACGAA",8,67.49,7.76,-3.01,0.25,1.5,1.12,0.03,">1 nonsynonymous","V103L L122N Y143F Q163S",4
"lib1","SARS-CoV-2","TCACTTCCAGCGTCAG",6,127.06,10.73,-0.03,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCACTTCCCATGGGGT",4,54.08,10.78,0.02,0.06,2.96,1.03,0,"1 nonsynonymous","A190V",1
"lib1","SARS-CoV-2","TCACTTCCCTCGCGCT",10,82.71,9.12,-1.64,0.17,1.81,1.12,0.01,">1 nonsynonymous","Y35C V181L",2
"lib1","SARS-CoV-2","TCACTTCCTTATGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S A22R F99I",3
"lib1","SARS-CoV-2","TCACTTCGGGATGACC",1,43.91,7.72,-3.05,0.13,2.58,1.13,0.01,">1 nonsynonymous","S41L K87E F126R",3
"lib1","SARS-CoV-2","TCACTTCTAGTCACCA",1,15.06,8.7,-2.06,0.14,2.64,1.07,0.01,">1 nonsynonymous","G83C N118K P149T",3
"lib1","SARS-CoV-2","TCACTTCTGTCGAACT",7,58.6,10.36,-0.4,0.06,2.82,1,0,">1 nonsynonymous","N24P Y35F",2
"lib1","SARS-CoV-2","TCACTTCTTCTGAATA",9,2.71,NA,NA,NA,NA,NA,NA,"stop","Y50V N107G T140*",3
"lib1","SARS-CoV-2","TCACTTGAACCAGAAC",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I T85K D98A",3
"lib1","SARS-CoV-2","TCACTTGAAGGTTACA",2,66.19,9.08,-1.69,0.08,2.77,1.1,0,">1 nonsynonymous","N109Q P177A",2
"lib1","SARS-CoV-2","TCACTTGACATTCTTT",1,49.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4L K94T A105L",3
"lib1","SARS-CoV-2","TCACTTGATCATAGAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","F70E Y119L Y143* F160V",4
"lib1","SARS-CoV-2","TCACTTGCACGACATT",1,29.97,10.84,0.08,0.12,2.85,1.07,0.01,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","TCACTTTAAAAGGGTG",2,42.91,10.04,-0.73,0.05,2.95,1.01,0,">1 nonsynonymous","R16L Q168T",2
"lib1","SARS-CoV-2","TCACTTTAATACTCCG",1,27.85,10.68,-0.09,0.06,2.82,1.08,0,"1 nonsynonymous","S43W",1
"lib1","SARS-CoV-2","TCACTTTATTGCACCA",7,112.74,6.03,-4.73,0.52,1.5,1.15,0.01,"1 nonsynonymous","R179N",1
"lib1","SARS-CoV-2","TCACTTTCCACTTAAA",14,54.75,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A81T V103G Y121S",3
"lib1","SARS-CoV-2","TCACTTTCGATATGGT",3,57.73,6.08,-4.69,1.36,1.5,1.34,0.04,">1 nonsynonymous","Y91S R127N",2
"lib1","SARS-CoV-2","TCACTTTGAACGATAA",4,123.21,10.4,-0.37,0.05,2.84,1.06,0,">1 nonsynonymous","F62N T85K T140R",3
"lib1","SARS-CoV-2","TCACTTTGAACGGTCT",8,97.09,8.06,-2.7,0.17,1.85,1.12,0.01,">1 nonsynonymous","S29F S113L T201A",3
"lib1","SARS-CoV-2","TCACTTTGCAGTAACC",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I L183C",2
"lib1","SARS-CoV-2","TCACTTTGCGATTATC",1,59.09,11.05,0.28,0.07,2.96,1,0,">1 nonsynonymous","P149G N171Y",2
"lib1","SARS-CoV-2","TCAGAAAAAAAAACCT",2,21.02,10.22,-0.54,0.11,2.76,1,0.01,">1 nonsynonymous","G9L T55H G83A A192S S200E",5
"lib1","SARS-CoV-2","TCAGAAAAAAGTTAAC",1,21.84,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F8K T46Q Y165I",3
"lib1","SARS-CoV-2","TCAGAAAAATCATCCA",8,68.24,10.38,-0.38,0.09,2.77,1.07,0,"1 nonsynonymous","A145M",1
"lib1","SARS-CoV-2","TCAGAAAAATCCCACA",3,0.22,NA,NA,NA,NA,NA,NA,"stop","F8M Y50C L60*",3
"lib1","SARS-CoV-2","TCAGAAAACAAGCGCA",1,8.21,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","Y35G D98A Q144P Q163L P169E",5
"lib1","SARS-CoV-2","TCAGAAAATACAACCT",4,67.42,10.82,0.05,0.05,2.9,1.02,0,"1 nonsynonymous","D59E",1
"lib1","SARS-CoV-2","TCAGAAACAGGCATAA",8,14.39,6.24,-4.53,0.78,1.5,1.16,0.02,">1 nonsynonymous","C61Q Q79R A105P E135Y",4
"lib1","SARS-CoV-2","TCAGAAACCAAGAAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","I28* F70P",2
"lib1","SARS-CoV-2","TCAGAAACGATACACA",9,155.06,10.73,-0.04,0.04,2.91,1.05,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","TCAGAAAGGTAATACT",4,37.84,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49S I72H P82S N109T P133Y",5
"lib1","SARS-CoV-2","TCAGAAAGTCGTTGGG",4,48.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89C D112Q",2
"lib1","SARS-CoV-2","TCAGAAAGTTTTTCGA",4,70.45,10.13,-0.64,0.11,2.14,1.06,0.01,">1 nonsynonymous","D59Y A89T I104F E186Y",4
"lib1","SARS-CoV-2","TCAGAAATAGTTAAAT",2,38.8,6,-4.76,2,1.5,1.22,0.06,"1 nonsynonymous","P177K",1
"lib1","SARS-CoV-2","TCAGAAATCGCGTAAG",8,90.19,6.14,-4.62,0.67,1.5,1.14,0.01,">1 nonsynonymous","I2L S19E Y119F I138K",4
"lib1","SARS-CoV-2","TCAGAAATGGGAAGCA",2,16.83,7.11,-3.66,0.37,1.62,1.25,0.02,">1 nonsynonymous","C61E L162A",2
"lib1","SARS-CoV-2","TCAGAAATTTCTACAA",2,34.15,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G51D F62V Y93S Y123W C158A",5
"lib1","SARS-CoV-2","TCAGAACAACTAAAAA",5,14.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T D59P A89F",3
"lib1","SARS-CoV-2","TCAGAACAGGGTCTAA",3,0.64,NA,NA,NA,NA,NA,NA,"stop","K56G K94C K132S Y178*",4
"lib1","SARS-CoV-2","TCAGAACATCCTGTTT",1,52.38,10.74,-0.03,0.08,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAGAACATCGCATTC",2,13.65,6,-4.76,2,3,1.15,0,">1 nonsynonymous","E10S Y35S F126R L183F",4
"lib1","SARS-CoV-2","TCAGAACATTCAAAAT",1,14.18,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V20S K94I L125S P149R",4
"lib1","SARS-CoV-2","TCAGAACCATATTCGC",14,156.94,9.14,-1.63,0.17,1.55,1.14,0.01,">1 nonsynonymous","K56N A105L",2
"lib1","SARS-CoV-2","TCAGAACCATTCGTCG",3,13.86,9.11,-1.65,0.09,2.91,1.05,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","TCAGAACCCGGTGCCA",7,43.49,10.52,-0.24,0.06,2.94,1,0,">1 nonsynonymous","C61R F160L",2
"lib1","SARS-CoV-2","TCAGAACCGCCGAATG",5,79.57,6.88,-3.89,0.27,1.5,1.11,0.01,">1 nonsynonymous","Y119L G146K",2
"lib1","SARS-CoV-2","TCAGAACGCTCCAAGA",2,9.15,10.76,0,0.08,3,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGAACTGTTATGGA",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R I104N T148R P161V P197T",5
"lib1","SARS-CoV-2","TCAGAAGCCACAGACA",3,106.54,9.07,-1.69,0.06,2.84,1.07,0,">1 nonsynonymous","K87L G146R Y178F",3
"lib1","SARS-CoV-2","TCAGAAGCCTGCTTTG",3,38.83,10.12,-0.64,0.05,2.7,1.02,0,">1 nonsynonymous","N13R K114F T201S",3
"lib1","SARS-CoV-2","TCAGAAGCGCACTAAA",1,0.9,NA,NA,NA,NA,NA,NA,"stop","C31R G74* G146F Y175Q",4
"lib1","SARS-CoV-2","TCAGAAGCGTATAAAC",5,69.83,9.13,-1.64,0.21,1.58,1.14,0.02,">1 nonsynonymous","T63P K132L S139L",3
"lib1","SARS-CoV-2","TCAGAAGCTTATTGCG",2,8.71,10.19,-0.58,0.17,3,1,0.01,">1 nonsynonymous","L5R V37R T55C",3
"lib1","SARS-CoV-2","TCAGAAGGCCGCTTTG",3,59.03,10.72,-0.05,0.07,2.93,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAGAAGTACGAAGAC",1,22.74,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","P54L N92L Y175L",3
"lib1","SARS-CoV-2","TCAGAATAACCAATTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y39E F44P",3
"lib1","SARS-CoV-2","TCAGAATAGACATTAA",5,118.27,9.71,-1.06,0.08,2.48,1.05,0,">1 nonsynonymous","D34Y G116T",2
"lib1","SARS-CoV-2","TCAGAATAGATCACGA",3,98.08,10.69,-0.08,0.06,2.92,1.04,0,">1 nonsynonymous","A33W I138K G174N",3
"lib1","SARS-CoV-2","TCAGAATATGCGGTCT",4,43.82,10.66,-0.1,0.03,2.93,1.05,0,"1 nonsynonymous","I142T",1
"lib1","SARS-CoV-2","TCAGAATCAAAATAAG",3,17.42,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L38F V77Y Y121H",3
"lib1","SARS-CoV-2","TCAGAATCCCATTCAT",3,33.81,10.72,-0.04,0.06,2.9,1.07,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","TCAGAATCCGACGCAC",1,2.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","TCAGAATGATATGCTG",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M D98G N151Y",3
"lib1","SARS-CoV-2","TCAGAATTAAATAAAG",5,79.13,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","TCAGACAAAGCAAAAA",13,115.36,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59S D97N S113L R136N",4
"lib1","SARS-CoV-2","TCAGACAAATAATAAG",3,47.46,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T55F I80R S129V P149N G166H",5
"lib1","SARS-CoV-2","TCAGACAAGAAAGCAT",3,38.1,6,-4.76,2,3,1.12,0,">1 nonsynonymous","R27W S41Y A145F Q176R",4
"lib1","SARS-CoV-2","TCAGACAATAGATGAC",5,29.7,10.79,0.02,0.06,2.96,1.02,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TCAGACAATATAGTCA",3,17.73,9.83,-0.93,0.13,2.01,1.01,0.01,">1 nonsynonymous","N4G C49T F160R",3
"lib1","SARS-CoV-2","TCAGACAGTTTTTATG",7,38.1,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A33C V71S P133S",3
"lib1","SARS-CoV-2","TCAGACATTCGATATA",1,39.84,8.98,-1.78,0.1,1.72,1.13,0.01,">1 nonsynonymous","L5V G83M D97L L162F",4
"lib1","SARS-CoV-2","TCAGACCATTTCAAAT",3,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E L95R G146R E154S",4
"lib1","SARS-CoV-2","TCAGACCCAAAGTCGA",5,79.76,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G101S F167L",2
"lib1","SARS-CoV-2","TCAGACCCAGTGTACG",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q G86M N130R A192P",4
"lib1","SARS-CoV-2","TCAGACCCATTTACCT",8,99.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2F C31R N157Y",3
"lib1","SARS-CoV-2","TCAGACCCCTTGTGTA",9,65.02,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10P S19C S41I C49Q A67S N92L G101E L122K",8
"lib1","SARS-CoV-2","TCAGACCTACACTTAA",9,104.61,8.86,-1.91,0.09,2.44,1.15,0,">1 nonsynonymous","D34C Y91N G174E",3
"lib1","SARS-CoV-2","TCAGACGTGTTAGCGC",2,81.43,10.31,-0.46,0.06,2.86,1.02,0,"1 nonsynonymous","D59P",1
"lib1","SARS-CoV-2","TCAGACGTTAAGGGAC",11,78.49,6,-4.76,0.89,1.5,1.14,0.01,">1 nonsynonymous","C31P G51R A105I S113P L122F",5
"lib1","SARS-CoV-2","TCAGACTAAATAATCT",10,108.64,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F44N V103M F167N",3
"lib1","SARS-CoV-2","TCAGACTGAGTGTATC",2,15.48,10.78,0.02,0.09,2.94,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAGACTTAGTCTCAA",6,1.11,NA,NA,NA,NA,NA,NA,"stop","C31* Q144V",2
"lib1","SARS-CoV-2","TCAGAGAAAATCTTCT",10,245.31,10.67,-0.09,0.05,2.93,1.04,0,">1 nonsynonymous","R78A D97K T201R",3
"lib1","SARS-CoV-2","TCAGAGACACTCTATA",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S T100K Y178I",3
"lib1","SARS-CoV-2","TCAGAGACATAAAACT",1,23.54,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F17W V115T I138A N157V V173M",5
"lib1","SARS-CoV-2","TCAGAGACATACCGAA",7,1.58,NA,NA,NA,NA,NA,NA,"stop","T55N L60R E141N L183P S184*",5
"lib1","SARS-CoV-2","TCAGAGAGACCATATT",2,12.77,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","D59K A67P S184I",3
"lib1","SARS-CoV-2","TCAGAGATGGAAAGTC",4,62.04,8.21,-2.56,0.11,2.06,1.08,0,">1 nonsynonymous","V37W S139P",2
"lib1","SARS-CoV-2","TCAGAGCACGGCTCGC",3,27.2,7.03,-3.73,0.36,1.5,1.13,0.03,">1 nonsynonymous","N1W V11R V153S S164Y",4
"lib1","SARS-CoV-2","TCAGAGCCGAGATTTA",7,241.84,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y159L Y175V",2
"lib1","SARS-CoV-2","TCAGAGCGCATCCTTT",1,17.96,8.84,-1.93,0.36,1.5,1.06,0.07,">1 nonsynonymous","L5N S19L",2
"lib1","SARS-CoV-2","TCAGAGCTGAATTGAG",3,20.35,6,-4.76,2,3,1.03,0,">1 nonsynonymous","T46H V71I Y93I V103Y",4
"lib1","SARS-CoV-2","TCAGAGGGCCGGGGTA",4,49.15,10.54,-0.22,0.03,2.97,1,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","TCAGAGGTAATTTCTA",3,20.92,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D90F T100N N157H F167L",4
"lib1","SARS-CoV-2","TCAGAGTAAAATCTAG",1,22.67,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","R16L S41E G51E V173S T201L",5
"lib1","SARS-CoV-2","TCAGAGTAACAAACTA",1,33.98,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N30M G51Y D59A G116E Y121S",5
"lib1","SARS-CoV-2","TCAGAGTGAAGGCCAA",6,74.05,10.54,-0.23,0.05,2.94,1.01,0,"1 nonsynonymous","D98C",1
"lib1","SARS-CoV-2","TCAGAGTGACATCTTA",2,75.52,10.23,-0.53,0.05,2.9,1,0,">1 nonsynonymous","Y35G D97L I142L",3
"lib1","SARS-CoV-2","TCAGATAAACAGACAT",2,19.24,9.37,-1.39,0.17,1.71,1.07,0.01,">1 nonsynonymous","N13V D90E",2
"lib1","SARS-CoV-2","TCAGATAAACATTGAA",2,18.65,6.94,-3.82,0.19,1.89,1.06,0.01,">1 nonsynonymous","K48L I80V G86L P133F C150N T201H",6
"lib1","SARS-CoV-2","TCAGATAAACTGCGCT",4,69.2,10.62,-0.15,0.08,2.77,1.06,0,"1 nonsynonymous","C61G",1
"lib1","SARS-CoV-2","TCAGATAACAACTGAG",2,52.91,9.87,-0.9,0.12,2.21,1.05,0.01,">1 nonsynonymous","D98K A105Y",2
"lib1","SARS-CoV-2","TCAGATAAGAAAAAGT",1,20.03,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","V11F K56L A81C V103T",4
"lib1","SARS-CoV-2","TCAGATAAGTCCTCTA",1,9.47,7.21,-3.56,0.57,1.5,1.5,0.07,">1 nonsynonymous","T46N W106Q G116S",3
"lib1","SARS-CoV-2","TCAGATAATAGGTATG",12,54.9,9.94,-0.83,0.11,1.99,1.08,0,">1 nonsynonymous","A42H D90I D98V",3
"lib1","SARS-CoV-2","TCAGATAATGGACAAG",4,20.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N4T T15K Y50N P161I T201K",5
"lib1","SARS-CoV-2","TCAGATACCAAAGAAG",2,8.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K87V I104Y S113A Y159T",4
"lib1","SARS-CoV-2","TCAGATACGCCCTACT",1,19.64,9.49,-1.28,0.09,2.78,1.08,0,"1 nonsynonymous","T170E",1
"lib1","SARS-CoV-2","TCAGATATCTAACTAT",18,630.34,7.68,-3.09,0.32,1.5,1.05,0.03,">1 nonsynonymous","Y35S F44M G152S P169T Y175W F185M",6
"lib1","SARS-CoV-2","TCAGATATCTTTTTAA",4,50.48,10.69,-0.07,0.1,2.79,1.05,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","TCAGATCACTGAACCA",4,57.05,10.75,-0.02,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGATCATAAATATG",8,53.27,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","F99P G155Q",2
"lib1","SARS-CoV-2","TCAGATCGTTCTATCC",4,25.67,8.39,-2.37,0.16,2,1.07,0.01,">1 nonsynonymous","D90Y K132M Q163D",3
"lib1","SARS-CoV-2","TCAGATCTTTTAGAAT",3,3.32,NA,NA,NA,NA,NA,NA,"stop","N4C I28K R73S T100Y Y123*",5
"lib1","SARS-CoV-2","TCAGATGAAGTCCTCC",7,6.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23R K48G K56P T63S D90R P149L V180P",7
"lib1","SARS-CoV-2","TCAGATGACAGAAAAA",1,35.33,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","D98H R124A",2
"lib1","SARS-CoV-2","TCAGATGACCTACTCT",8,72.92,10.59,-0.18,0.05,2.9,1.02,0,">1 nonsynonymous","N1L N64C K198Y",3
"lib1","SARS-CoV-2","TCAGATGAGACAAGCT",9,159.35,10.55,-0.21,0.04,2.88,1.04,0,"1 nonsynonymous","N120W",1
"lib1","SARS-CoV-2","TCAGATGCCCGGAATT",1,5.76,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","A42M S69L R124T",3
"lib1","SARS-CoV-2","TCAGATGGTAATAAAA",7,19.95,6,-4.76,2,1.5,1.31,0.05,">1 nonsynonymous","F70R G116Y Q144L",3
"lib1","SARS-CoV-2","TCAGATGGTGACTTAT",2,23.85,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N64P D90P",2
"lib1","SARS-CoV-2","TCAGATGTATCTGATG",11,38.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83C G101E G174R",3
"lib1","SARS-CoV-2","TCAGATGTTTACCTTA",2,63.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4P C31F F44A V65N D98E I142H G166V V173S",8
"lib1","SARS-CoV-2","TCAGATTAATCAATAT",2,69.04,9.98,-0.78,0.08,2.1,1,0,">1 nonsynonymous","L57S K128L",2
"lib1","SARS-CoV-2","TCAGATTAGTCAAAAA",6,0.35,NA,NA,NA,NA,NA,NA,"stop","C49T F70* T201I",3
"lib1","SARS-CoV-2","TCAGATTCCTTTAGAA",4,22.63,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","F47S D90E C150R G155I F167P",5
"lib1","SARS-CoV-2","TCAGATTCGAGGACGG",5,47.01,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V65P I88F",2
"lib1","SARS-CoV-2","TCAGCAAAAAACTGGT",5,87.1,10.55,-0.21,0.04,2.94,1.02,0,">1 nonsynonymous","L5Q G116T T201G",3
"lib1","SARS-CoV-2","TCAGCAAAACACAGAG",1,34.35,9.46,-1.31,0.11,2.89,1.02,0.01,"1 nonsynonymous","G166H",1
"lib1","SARS-CoV-2","TCAGCAAACGACCGGC",3,30.92,10.58,-0.18,0.08,2.9,1,0,">1 nonsynonymous","T15L N64H",2
"lib1","SARS-CoV-2","TCAGCAAATAAAAGGA",1,15.74,7.94,-2.82,0.31,1.5,1.05,0.03,">1 nonsynonymous","Y35N A105C T148M",3
"lib1","SARS-CoV-2","TCAGCAACATGAACCA",6,162.94,8.23,-2.53,0.16,2.05,1.14,0.01,">1 nonsynonymous","N40D S113Y P149S",3
"lib1","SARS-CoV-2","TCAGCAACGGTGACCA",3,119.89,9.85,-0.91,0.11,2.06,1.08,0,">1 nonsynonymous","L38H S43T P54M L122V",4
"lib1","SARS-CoV-2","TCAGCAACTGAAGATG",4,98.51,10.63,-0.14,0.05,2.89,1.07,0,"1 nonsynonymous","A33C",1
"lib1","SARS-CoV-2","TCAGCAAGCAAGCTAG",3,78.11,10.77,0.01,0.09,2.92,1.05,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","TCAGCAAGCACCAGAT",1,5.07,6.94,-3.82,0.33,2.12,1,0.01,">1 nonsynonymous","A33E D59L S139W E154L",4
"lib1","SARS-CoV-2","TCAGCAATGACAGTGT",1,27.47,9.9,-0.87,0.08,2.51,1.03,0,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","TCAGCACAGTGTATGA",4,111.48,8.8,-1.96,0.13,1.93,1.15,0.01,">1 nonsynonymous","N1H G9V Y123N",3
"lib1","SARS-CoV-2","TCAGCACCATATTACA",4,38.24,6.55,-4.21,0.32,1.5,1.12,0.02,">1 nonsynonymous","V52S N171D",2
"lib1","SARS-CoV-2","TCAGCACCCCTAAAAC",2,41.41,8.13,-2.63,0.21,1.5,1.07,0.02,">1 nonsynonymous","R73Q G83D P149V P169S",4
"lib1","SARS-CoV-2","TCAGCACGCGCTATTT",2,4.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181G",1
"lib1","SARS-CoV-2","TCAGCACTAGACTGTC",11,149.73,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11S V37T G83S T100Y V115F Y121W",6
"lib1","SARS-CoV-2","TCAGCACTCAGACATA",3,31.39,9.67,-1.1,0.05,2.83,1.05,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","TCAGCACTCTCAATAC",6,52.25,7.93,-2.84,0.23,1.5,1.05,0.02,">1 nonsynonymous","I104S G117D T148L",3
"lib1","SARS-CoV-2","TCAGCAGCACCAAGCG",6,52.1,9.77,-0.99,0.18,1.74,1.09,0.01,">1 nonsynonymous","I2P L60V A81T I138S",4
"lib1","SARS-CoV-2","TCAGCAGCGCTGAAAC",4,28.01,9.77,-0.99,0.05,2.85,1.07,0,">1 nonsynonymous","S53T Y119F",2
"lib1","SARS-CoV-2","TCAGCAGTGGATATAT",2,3.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCAGCAGTTTAAGACA",3,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N Y93N V103S V180Q",4
"lib1","SARS-CoV-2","TCAGCATATTGCTAAA",2,83.43,10.27,-0.49,0.04,2.95,1.01,0,">1 nonsynonymous","V37L F62Y G174L",3
"lib1","SARS-CoV-2","TCAGCATGGATGCGGA",1,60.58,10.68,-0.08,0.06,2.91,1.02,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","TCAGCCAAAACACGAC",3,30.67,10.81,0.05,0.09,2.97,1.02,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","TCAGCCAAAATATTAC",3,94.73,10.64,-0.13,0.1,2.94,1.06,0,"1 nonsynonymous","T148F",1
"lib1","SARS-CoV-2","TCAGCCAACAATGAAT",12,118.26,6.96,-3.8,0.21,1.5,1.14,0.01,">1 nonsynonymous","I2W G9Q N107W",3
"lib1","SARS-CoV-2","TCAGCCACACCACTCG",4,11.65,6.12,-4.65,1.7,1.5,1.1,0.01,">1 nonsynonymous","Y66A K87E G146F P149N",4
"lib1","SARS-CoV-2","TCAGCCACATTGGAAA",1,15.77,6,-4.76,1.4,3,1.02,0,">1 nonsynonymous","S45C I88H L95Q D137R F167D",5
"lib1","SARS-CoV-2","TCAGCCACTAAGCTAA",3,26.66,9.09,-1.67,0.29,1.5,1,0.03,">1 nonsynonymous","G9L P82T",2
"lib1","SARS-CoV-2","TCAGCCATAGATAATG",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W C102R I104Q",3
"lib1","SARS-CoV-2","TCAGCCATCGCCCGTA",1,7.26,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","T3W N40R F126N L131W",4
"lib1","SARS-CoV-2","TCAGCCATGCGACCCT",2,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43P V52I Q144R",3
"lib1","SARS-CoV-2","TCAGCCATTGATGAAC",5,44.7,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L5R V37H T46P A89D C102P F126V",6
"lib1","SARS-CoV-2","TCAGCCCACAGCGAAA",2,18.07,6.42,-4.35,0.87,1.5,1.25,0.06,">1 nonsynonymous","G86H V103P Y165K",3
"lib1","SARS-CoV-2","TCAGCCCTACCCTGGG",1,26.44,9.28,-1.48,0.12,2.75,1.06,0.01,">1 nonsynonymous","N13H R27T Y159W",3
"lib1","SARS-CoV-2","TCAGCCCTTGGACAAG",4,95.68,9.84,-0.92,0.09,2.53,1.04,0,">1 nonsynonymous","T15G G116M V153L",3
"lib1","SARS-CoV-2","TCAGCCGAAAATCTTA",6,694.09,10.67,-0.09,0.03,2.96,1.01,0,">1 nonsynonymous","V37R D90R",2
"lib1","SARS-CoV-2","TCAGCCGGAACGAATA",7,154.42,10.75,-0.01,0.05,2.9,1.04,0,">1 nonsynonymous","T3E S29V Y39L",3
"lib1","SARS-CoV-2","TCAGCCGTGAACCAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S19A A89* Y123V",3
"lib1","SARS-CoV-2","TCAGCCTAGTTCAGAG",3,12.76,9.03,-1.73,0.4,1.5,1,0.07,">1 nonsynonymous","N13L K56G Y91W G155K",4
"lib1","SARS-CoV-2","TCAGCCTCAACCTGCA",5,140.82,8.43,-2.33,0.13,1.5,1.13,0.01,">1 nonsynonymous","A14E I28E C61K D98N F160S",5
"lib1","SARS-CoV-2","TCAGCCTCTAGATTAG",2,27.27,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T63H E76Y F99M",3
"lib1","SARS-CoV-2","TCAGCGAAAAAGGGAA",2,3.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150A",1
"lib1","SARS-CoV-2","TCAGCGAATAATCTTT",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66R E141S",2
"lib1","SARS-CoV-2","TCAGCGAATATAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","A22M S41*",2
"lib1","SARS-CoV-2","TCAGCGAATCATTCTA",1,44.27,10.44,-0.32,0.08,2.8,1.07,0,">1 nonsynonymous","L5W I104T L122R",3
"lib1","SARS-CoV-2","TCAGCGAATCCACTGG",4,6.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41F W106A I138L P161N",4
"lib1","SARS-CoV-2","TCAGCGACCGGTCGAA",1,45.25,10.53,-0.23,0.06,2.96,1,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","TCAGCGACGCTGTCAT",5,12.12,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L5E T15W S45Y Q84N L95R V173Y",6
"lib1","SARS-CoV-2","TCAGCGACTCTTTCAC",9,55.88,9.97,-0.79,0.1,2.82,1.04,0,">1 nonsynonymous","N4S T170M E186N",3
"lib1","SARS-CoV-2","TCAGCGATATCATCCC",10,77.14,9.99,-0.77,0.09,1.98,1.04,0,">1 nonsynonymous","W106L S129V",2
"lib1","SARS-CoV-2","TCAGCGGCCTAATCAA",5,19.58,6.15,-4.62,1.49,1.5,1.35,0.04,">1 nonsynonymous","K48Y C61P W106S",3
"lib1","SARS-CoV-2","TCAGCGTGACAAAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I L60N D97W T100D",4
"lib1","SARS-CoV-2","TCAGCGTTACTATATT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* A14Q I28R F62N D97M Q168P Y175S",7
"lib1","SARS-CoV-2","TCAGCTAAAAACAAAC",5,50.16,7.71,-3.06,0.36,1.5,1.08,0.04,">1 nonsynonymous","G83C D90I R127K C150S",4
"lib1","SARS-CoV-2","TCAGCTAAGCGGAAAC",9,32.74,10.7,-0.07,0.03,2.95,1.02,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","TCAGCTAGTATACGAA",5,61.98,9.75,-1.02,0.11,2.24,1.11,0.01,">1 nonsynonymous","K94Q A145S",2
"lib1","SARS-CoV-2","TCAGCTATATTATATG",4,18.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V77D G174T E186D",3
"lib1","SARS-CoV-2","TCAGCTCCGGAACCGT",3,70.95,10.74,-0.02,0.04,2.95,1,0,">1 nonsynonymous","P7R Y66V",2
"lib1","SARS-CoV-2","TCAGCTGGGACGGCAC",4,2.2,NA,NA,NA,NA,NA,NA,"stop","G51C K56N F99W I104G S129F R136S G146* Y178G",8
"lib1","SARS-CoV-2","TCAGCTGGGCCCGTTT",1,67.29,10.78,0.01,0.05,2.93,1.03,0,"1 nonsynonymous","T15S",1
"lib1","SARS-CoV-2","TCAGCTGTAATAACAT",3,7.66,6.91,-3.85,0.32,2.61,1.06,0.02,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","TCAGCTGTCGATTACC",4,44.11,9.84,-0.93,0.17,1.93,1.05,0.01,">1 nonsynonymous","A89C T100R E135S",3
"lib1","SARS-CoV-2","TCAGCTTAGATGTATC",3,62.51,7.01,-3.76,0.38,1.5,1.18,0.03,">1 nonsynonymous","W23M V37C",2
"lib1","SARS-CoV-2","TCAGCTTCTCATTGAA",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135I E141S N157I",3
"lib1","SARS-CoV-2","TCAGCTTGCTCGAAAC",2,9.87,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","G9M S41C T55K D68N P149D",5
"lib1","SARS-CoV-2","TCAGCTTTGAGACCCG",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C S45V F185S",3
"lib1","SARS-CoV-2","TCAGGAAACATGTCCC",4,60.93,10.07,-0.69,0.07,2.76,1.01,0,">1 nonsynonymous","C61N V173S",2
"lib1","SARS-CoV-2","TCAGGAAACCTTATCG",3,46.85,6.65,-4.11,0.55,1.5,1.22,0.04,">1 nonsynonymous","V20K R25H D98I S139T",4
"lib1","SARS-CoV-2","TCAGGAACACTGCCAA",3,70.18,10.21,-0.55,0.07,2.8,1.02,0,">1 nonsynonymous","V52I A81H D98N",3
"lib1","SARS-CoV-2","TCAGGAACCAGTAGGA",8,5.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L G152A V173P V181N",4
"lib1","SARS-CoV-2","TCAGGAACCTATAATT",2,7.73,6.64,-4.13,0.57,1.5,1.13,0.06,">1 nonsynonymous","C6L G51F",2
"lib1","SARS-CoV-2","TCAGGAACTCCTATTT",1,55.28,8.39,-2.37,0.16,2.47,1.1,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","TCAGGAAGCCATGGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R C49Y V182T",3
"lib1","SARS-CoV-2","TCAGGAATGGACTCTT",7,94.47,10.75,-0.01,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGGAATGTAGAATT",3,31.23,10.75,-0.02,0.09,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGGAATTCCTTCCA",5,62.69,8.86,-1.9,0.11,1.94,1.14,0,">1 nonsynonymous","K26A V37I S45F G155D",4
"lib1","SARS-CoV-2","TCAGGACAAGGAACTT",6,25.58,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V20W D68R K94V",3
"lib1","SARS-CoV-2","TCAGGACATGTATAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A42K P96* L122Q",3
"lib1","SARS-CoV-2","TCAGGACCAATCAGGC",2,1.14,NA,NA,NA,NA,NA,NA,"stop","C6* K56S",2
"lib1","SARS-CoV-2","TCAGGACCATTAGTCA",4,68.65,10.78,0.02,0.07,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAGGACGAACTTCGA",1,78.64,10.68,-0.08,0.09,2.9,1.03,0,">1 nonsynonymous","K26L N120A",2
"lib1","SARS-CoV-2","TCAGGAGAATAAGACT",1,8.73,11,0.23,0.11,3,1.01,0,"1 nonsynonymous","G152H",1
"lib1","SARS-CoV-2","TCAGGAGGCTTGCCAT",3,117.58,8.37,-2.39,0.09,2.34,1.11,0,">1 nonsynonymous","Y21F D90S G146E Q163R",4
"lib1","SARS-CoV-2","TCAGGAGGTGTAGTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","A42S Y91* T100S",3
"lib1","SARS-CoV-2","TCAGGAGTCAATCTTA",1,328.54,10.78,0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGGAGTTATGCAAT",2,16.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5W P177V",2
"lib1","SARS-CoV-2","TCAGGCACATTATTTA",1,60.07,6.54,-4.22,0.42,1.5,1.13,0.02,">1 nonsynonymous","R16M Y35R F160Q Q168K",4
"lib1","SARS-CoV-2","TCAGGCACTCGATAGT",3,7.45,9.98,-0.78,0.34,2.42,1.1,0.04,">1 nonsynonymous","N1S L60T G116D T148M",4
"lib1","SARS-CoV-2","TCAGGCCAAAAAGAAT",5,1.58,NA,NA,NA,NA,NA,NA,"stop","W23V G86A G116R T201*",4
"lib1","SARS-CoV-2","TCAGGCGAAGCATTAC",5,32.14,8.02,-2.75,0.34,1.5,1,0.05,">1 nonsynonymous","K26N S45I R136S",3
"lib1","SARS-CoV-2","TCAGGCGCTTGTGGTT",4,57.88,10.74,-0.02,0.06,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGGGAAAGTGCCAG",6,74.37,10.39,-0.37,0.06,2.81,1.03,0,">1 nonsynonymous","F134K T201M",2
"lib1","SARS-CoV-2","TCAGGGATCTATAACG",4,18.37,9.87,-0.9,0.07,2.79,1.15,0,">1 nonsynonymous","E10N P149T G152K",3
"lib1","SARS-CoV-2","TCAGGGATGACTCCAG",4,59.07,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9F E76S R127E",3
"lib1","SARS-CoV-2","TCAGGGCATGTAATGT",6,53.39,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L57K A89R T100L K198G",4
"lib1","SARS-CoV-2","TCAGGGCGCAGCACAA",3,21.99,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","P82T P96G T201Q",3
"lib1","SARS-CoV-2","TCAGGGCGGCGAATAT",2,93.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35T K132L I142N F167T L187G",5
"lib1","SARS-CoV-2","TCAGGTAAATAAGTGG",1,0.18,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","TCAGGTATGATCTGCT",2,19.21,9.55,-1.21,0.13,2.68,1.08,0.01,">1 nonsynonymous","S45P G116L",2
"lib1","SARS-CoV-2","TCAGGTCCCATGCGAA",3,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A33R P82Q Y123L K199M",5
"lib1","SARS-CoV-2","TCAGGTGAAACGCAGG",1,0.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","TCAGGTGGCGCAATCT",3,24.15,10.41,-0.35,0.07,2.89,1.06,0,">1 nonsynonymous","F62P G116R",2
"lib1","SARS-CoV-2","TCAGGTGTTTAAATTG",4,81.18,7.38,-3.39,0.25,1.5,1.07,0.02,">1 nonsynonymous","N64H V77Y G166V",3
"lib1","SARS-CoV-2","TCAGGTTATGTACAGA",2,113.38,9.94,-0.82,0.11,2.19,1.02,0,">1 nonsynonymous","A14E Y35G F44H",3
"lib1","SARS-CoV-2","TCAGGTTCTCTAACAC",2,121.79,9.36,-1.4,0.14,2.4,1.15,0.01,">1 nonsynonymous","N13Y L111M K132L G166A",4
"lib1","SARS-CoV-2","TCAGGTTTTAGATCCG",4,39.21,9.92,-0.84,0.12,2.02,1.12,0.01,">1 nonsynonymous","E10Q S53Y D98V",3
"lib1","SARS-CoV-2","TCAGGTTTTGTAGTAA",5,53.81,7.05,-3.72,0.22,1.5,1.11,0.01,">1 nonsynonymous","S41I K114N G146M N171S",4
"lib1","SARS-CoV-2","TCAGTAAAAAAATTTT",7,80.11,9.81,-0.95,0.09,2.52,1.04,0,">1 nonsynonymous","K48N A105M",2
"lib1","SARS-CoV-2","TCAGTAAAATACAAAG",16,79.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T V181Y",2
"lib1","SARS-CoV-2","TCAGTAAATAAATAAT",1,31.16,10.25,-0.52,0.07,2.91,1.01,0,">1 nonsynonymous","N118E R136Q",2
"lib1","SARS-CoV-2","TCAGTAAATTCAACCC",1,12.82,11.02,0.25,0.12,2.9,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCAGTAAGCTAGACAA",2,167.64,10.32,-0.44,0.04,2.9,1.04,0,">1 nonsynonymous","Y39N F47M C61V",3
"lib1","SARS-CoV-2","TCAGTAATCCCTGAAC",4,82.6,10.7,-0.06,0.03,2.9,1.03,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","TCAGTAATTTCAGTAT",8,84.79,8.49,-2.27,0.19,2.27,1.13,0.01,"1 nonsynonymous","D112T",1
"lib1","SARS-CoV-2","TCAGTACAAGAAAATG",1,12.28,10.61,-0.15,0.11,2.95,1.03,0.01,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","TCAGTACAGCAGATTA",1,21.43,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P96L G116S C158F",3
"lib1","SARS-CoV-2","TCAGTAGCACAACCAG",4,33.31,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","G9T V37P Y50D D97T Y175M",5
"lib1","SARS-CoV-2","TCAGTAGCTTACGGAA",10,154.4,9.66,-1.1,0.11,2.06,1.06,0,">1 nonsynonymous","N40I S45P",2
"lib1","SARS-CoV-2","TCAGTAGTGAACCTCA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","C6L V37R E141*",3
"lib1","SARS-CoV-2","TCAGTATAACACTAAT",3,35.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4I Q84K P161F",3
"lib1","SARS-CoV-2","TCAGTATCAAGACATT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* C150L",2
"lib1","SARS-CoV-2","TCAGTATGAACAACAT",5,2.8,NA,NA,NA,NA,NA,NA,"stop","V77E Q84R A105*",3
"lib1","SARS-CoV-2","TCAGTATTACAAAAAC",1,41.26,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K87N P96K C158Q",3
"lib1","SARS-CoV-2","TCAGTATTGAACAAAG",3,41.25,6,-4.76,1.2,1.5,1.12,0.02,">1 nonsynonymous","G9K L38A F44S R124L",4
"lib1","SARS-CoV-2","TCAGTCAAGCTTCTAA",4,45.97,6,-4.76,1.33,1.5,1.2,0.02,">1 nonsynonymous","F8K D97I F126Y S139F F160V",5
"lib1","SARS-CoV-2","TCAGTCAGCTACCTGT",8,1.84,NA,NA,NA,NA,NA,NA,"stop","P54A V77R W106S Y123* N157F",5
"lib1","SARS-CoV-2","TCAGTCATACATATAC",3,6.06,6.63,-4.14,1.26,3,1.11,0.01,">1 nonsynonymous","F44W V52L I88Y F99T S129F C150L L183S",7
"lib1","SARS-CoV-2","TCAGTCATACCCATAG",3,11,6.06,-4.7,2,1.5,1.11,0.01,">1 nonsynonymous","N13S N92V K132A Q144T",4
"lib1","SARS-CoV-2","TCAGTCATGAGAAAGG",11,25.04,10.74,-0.03,0.08,2.93,1.02,0,"1 nonsynonymous","Y91L",1
"lib1","SARS-CoV-2","TCAGTCATTAATAAGA",1,8.12,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V37K I72K T170I",3
"lib1","SARS-CoV-2","TCAGTCCCTCCTGACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112L N118M I138R Q176L A192S",5
"lib1","SARS-CoV-2","TCAGTCCGTGCATGTC",7,0.7,NA,NA,NA,NA,NA,NA,"stop","N1A P7K R27S T46M T55G F62R S129C T148* L188M",9
"lib1","SARS-CoV-2","TCAGTCCTATTCTATA",1,41.25,10.82,0.06,0.06,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCAGTCGAATACTAAC",2,60.18,6,-4.76,2,2.48,1.25,0.01,">1 nonsynonymous","Y39R N110Y D137S E154R V181L P197E",6
"lib1","SARS-CoV-2","TCAGTCGTATATAATA",2,7.57,9.87,-0.89,0.17,2.28,1,0.01,"1 nonsynonymous","F47N",1
"lib1","SARS-CoV-2","TCAGTCGTTGGGAAGG",1,37.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73F K87S Q176I",3
"lib1","SARS-CoV-2","TCAGTCTCATGACAAA",5,20.61,8.71,-2.05,0.1,2.95,1.06,0,">1 nonsynonymous","S36E G166D",2
"lib1","SARS-CoV-2","TCAGTCTGGAAAACTA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","Y35* T170C",2
"lib1","SARS-CoV-2","TCAGTGAAAAAATTCG",4,33.24,10.75,-0.01,0.05,2.94,1.04,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TCAGTGAAATAAATCT",5,52.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G83D A89Y F99S S113P P161S",5
"lib1","SARS-CoV-2","TCAGTGAACGATGTGA",1,10.7,8.19,-2.58,0.28,1.66,1.06,0.04,">1 nonsynonymous","F8T T100V N107R",3
"lib1","SARS-CoV-2","TCAGTGACCTGAGCGT",7,75.43,10.33,-0.43,0.05,2.97,1,0,">1 nonsynonymous","R16L K87N",2
"lib1","SARS-CoV-2","TCAGTGACTAATTCAA",6,31.41,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50K P82V E141D G174M",4
"lib1","SARS-CoV-2","TCAGTGATGGCTAAAG",1,45.82,6,-4.76,1.38,1.5,1.2,0.02,">1 nonsynonymous","N1R N24G A89P G117F",4
"lib1","SARS-CoV-2","TCAGTGGAATAAAAGG",3,103.54,10.7,-0.06,0.09,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGTGGCAAAAATTC",3,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67Y V77S L122I",3
"lib1","SARS-CoV-2","TCAGTGTCTCTATCAC",1,24.96,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C49G L57G N107M F167I Y178M",5
"lib1","SARS-CoV-2","TCAGTGTGCGGATACC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63D Y93G",2
"lib1","SARS-CoV-2","TCAGTGTTCCAAATAA",5,38.8,7.02,-3.75,0.33,1.5,1.21,0.02,">1 nonsynonymous","L57K S129L G152H K198F",4
"lib1","SARS-CoV-2","TCAGTTAATCTATTTT",14,212.17,9.89,-0.87,0.06,2.75,1.04,0,">1 nonsynonymous","V37M D90Y G116A",3
"lib1","SARS-CoV-2","TCAGTTAGTCTCATAC",1,115.16,10.29,-0.47,0.05,2.82,1.02,0,">1 nonsynonymous","S43F F134C",2
"lib1","SARS-CoV-2","TCAGTTATACTAAGAT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H F12Q L122R",3
"lib1","SARS-CoV-2","TCAGTTATAGGCATGT",5,5.67,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","F99M V181C",2
"lib1","SARS-CoV-2","TCAGTTATATACAATA",2,34.13,8.65,-2.11,0.11,1.84,1.1,0.01,">1 nonsynonymous","F44C R136V",2
"lib1","SARS-CoV-2","TCAGTTATATAGCACG",5,0.04,NA,NA,NA,NA,NA,NA,"stop","R16S A22S R78*",3
"lib1","SARS-CoV-2","TCAGTTATTCTACTGC",2,56.26,10.62,-0.15,0.07,2.88,1.03,0,">1 nonsynonymous","E10T V153M",2
"lib1","SARS-CoV-2","TCAGTTCAAGATCCCC",5,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R N120R Y178R",3
"lib1","SARS-CoV-2","TCAGTTCATGTGATAC",6,124.77,10.7,-0.06,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGTTCCAGAACTTA",4,23.24,8.48,-2.29,0.15,1.7,1.13,0.02,">1 nonsynonymous","W106I P169E",2
"lib1","SARS-CoV-2","TCAGTTCGGGGAGGAC",1,56.24,10.9,0.14,0.06,2.88,1.08,0,"1 nonsynonymous","D98N",1
"lib1","SARS-CoV-2","TCAGTTGACCACAAAT",9,4.26,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib1","SARS-CoV-2","TCAGTTGCCGTAGACG",7,135.19,10.63,-0.13,0.04,2.9,1.07,0,">1 nonsynonymous","S41A F62A",2
"lib1","SARS-CoV-2","TCAGTTGCTAAGATTC",1,50.82,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A81N P133S Y175R",3
"lib1","SARS-CoV-2","TCAGTTGGTACTCCAA",4,92.75,10.82,0.05,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCAGTTTATCCTATCC",1,8.97,6.66,-4.1,0.29,3,1.14,0.01,">1 nonsynonymous","R16S L122P N157M R179N",4
"lib1","SARS-CoV-2","TCAGTTTATGAATAGA",2,1.62,NA,NA,NA,NA,NA,NA,"stop","E141* E154G C158W",3
"lib1","SARS-CoV-2","TCAGTTTCAGCCGAAA",6,18.26,10.37,-0.39,0.13,2.25,1,0.01,"1 nonsynonymous","W106S",1
"lib1","SARS-CoV-2","TCAGTTTGTTTAAATC",1,38.96,10.74,-0.03,0.08,2.95,1.04,0,">1 nonsynonymous","L5R N120D",2
"lib1","SARS-CoV-2","TCAGTTTTATTATCGT",3,44.6,6.45,-4.32,0.66,1.5,1.15,0.04,">1 nonsynonymous","I88N E141P G155K",3
"lib1","SARS-CoV-2","TCAGTTTTTTCAACAA",2,32.55,6.25,-4.51,0.78,1.5,1.19,0.04,">1 nonsynonymous","V37D D59W S113L Y119P P149T",5
"lib1","SARS-CoV-2","TCATAAAACAGCCTGA",20,294.31,10.78,0.02,0.04,2.93,1.03,0,"1 nonsynonymous","A190E",1
"lib1","SARS-CoV-2","TCATAAAACCGATTTG",8,53.73,10.39,-0.37,0.08,2.75,1.05,0,">1 nonsynonymous","T100N V173C K198Q",3
"lib1","SARS-CoV-2","TCATAAAATAATAAAG",2,18.26,10.72,-0.05,0.11,2.94,1,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","TCATAAAATGGCCGCA",10,165.39,9.57,-1.19,0.08,1.95,1.07,0,">1 nonsynonymous","A89G F160I",2
"lib1","SARS-CoV-2","TCATAAACAGATCTAC",3,63.93,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16T S41T C102L E141S N157V",5
"lib1","SARS-CoV-2","TCATAAACATTCGAAA",4,27.6,10.78,0.01,0.05,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATAAACGAAACTAG",1,43.08,10.86,0.09,0.07,2.93,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCATAAAGAAATTACC",1,0.86,NA,NA,NA,NA,NA,NA,"stop","V37* G155Y",2
"lib1","SARS-CoV-2","TCATAAAGAACTAGCG",3,2.75,NA,NA,NA,NA,NA,NA,"stop","E10S R25T Y39*",3
"lib1","SARS-CoV-2","TCATAAAGAATCCAAC",4,40.6,10.13,-0.63,0.1,2.46,1.06,0,">1 nonsynonymous","D90R S113A L122G I138M S184H",5
"lib1","SARS-CoV-2","TCATAAAGACACGATA",6,2.72,NA,NA,NA,NA,NA,NA,"stop","W106S Q144* T170L",3
"lib1","SARS-CoV-2","TCATAAAGCCCACTTG",12,84.98,7.61,-3.15,0.41,1.5,1,0.06,">1 nonsynonymous","A22S T100N I142S P169E",4
"lib1","SARS-CoV-2","TCATAAAGCCTCTTTG",3,111.5,10.41,-0.36,0.04,2.94,1.03,0,">1 nonsynonymous","L38M D97N",2
"lib1","SARS-CoV-2","TCATAAAGTCCTGCTT",3,6.67,6.86,-3.91,0.5,1.5,1.12,0.03,">1 nonsynonymous","I2N A89E",2
"lib1","SARS-CoV-2","TCATAAATAGGCAGCC",5,58.51,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G9A D34L N120R G146D G172L",5
"lib1","SARS-CoV-2","TCATAAATATTAATTA",1,47.26,10.2,-0.56,0.06,2.82,1.04,0,">1 nonsynonymous","D34R K48R",2
"lib1","SARS-CoV-2","TCATAAATGGATACAA",2,9.36,7.75,-3.02,0.46,1.5,1,0.06,">1 nonsynonymous","C31L D97Q S113Q",3
"lib1","SARS-CoV-2","TCATAACAAAACGAGG",3,55.74,9.95,-0.82,0.12,2.09,1.03,0.01,"1 nonsynonymous","A89F",1
"lib1","SARS-CoV-2","TCATAACAAAACTAAA",1,10.79,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6V K87F A105D Y121V",4
"lib1","SARS-CoV-2","TCATAACAAATAAGAC",2,26.08,8.55,-2.22,0.49,1.5,1.02,0.07,">1 nonsynonymous","F8V R25M T100V",3
"lib1","SARS-CoV-2","TCATAACAACCCCACC",4,37.58,10.71,-0.06,0.09,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATAACAAGGCGTGC",1,15.29,9.87,-0.89,0.08,2.86,1.07,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","TCATAACAGAGTTCAG",4,0.45,NA,NA,NA,NA,NA,NA,"stop","S41* K56A D97L P161W Q168*",5
"lib1","SARS-CoV-2","TCATAACCATGATTGG",6,46.35,9.58,-1.18,0.07,1.97,1.05,0,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","TCATAACCGATCAGCC",8,93.87,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y21M Y35V K56P F134L G174S",5
"lib1","SARS-CoV-2","TCATAACCGTACATAA",4,0.31,NA,NA,NA,NA,NA,NA,"stop","T55I D97A Y119S I138* V182I",5
"lib1","SARS-CoV-2","TCATAACCGTTGAGTG",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K V103D K114Y",3
"lib1","SARS-CoV-2","TCATAACGCTGTGACG",3,73.88,8.54,-2.23,0.14,1.8,1.17,0.01,">1 nonsynonymous","F62S K114S L122W F160I T170D",5
"lib1","SARS-CoV-2","TCATAACTTATACCAA",6,51.42,10.72,-0.04,0.06,2.93,1.02,0,">1 nonsynonymous","G9R A18P",2
"lib1","SARS-CoV-2","TCATAAGACGATAGAA",2,12.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R L122S",2
"lib1","SARS-CoV-2","TCATAAGACGTTATAA",2,21.31,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C31G P82W K132T T201M",4
"lib1","SARS-CoV-2","TCATAAGATAAAGATA",1,11.57,10.26,-0.5,0.08,2.93,1.03,0,">1 nonsynonymous","A33V T46A K87M",3
"lib1","SARS-CoV-2","TCATAAGCGAAGCGTT",4,70.2,10.51,-0.25,0.05,2.96,1.02,0,">1 nonsynonymous","N4D S29T A81R",3
"lib1","SARS-CoV-2","TCATAATAAAAGCTAA",8,155.23,8.89,-1.88,0.09,2.79,1.12,0,">1 nonsynonymous","E141F F156D",2
"lib1","SARS-CoV-2","TCATAATAAAATGAGG",5,46.92,10.09,-0.68,0.07,2.45,1.04,0,"1 nonsynonymous","T100G",1
"lib1","SARS-CoV-2","TCATAATAAACACTAA",7,52.06,10,-0.76,0.1,2.23,1.04,0,">1 nonsynonymous","F8L W106A",2
"lib1","SARS-CoV-2","TCATAATAAGAACGAA",2,21.33,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D98N F167A",2
"lib1","SARS-CoV-2","TCATAATAATCCAAGA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","L125W K132* C150F C158F",4
"lib1","SARS-CoV-2","TCATAATACTCAGCAA",1,5.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V T55R I104D",3
"lib1","SARS-CoV-2","TCATAATAGGTGTGAA",2,42.98,10.78,0.01,0.05,2.99,1.01,0,"1 nonsynonymous","L60I",1
"lib1","SARS-CoV-2","TCATAATCCCTTTGAG",4,38.19,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","T100P N120C G155T",3
"lib1","SARS-CoV-2","TCATAATCCTAAAAGG",5,22.15,6,-4.76,2,1.5,1.26,0.05,"1 nonsynonymous","V103G",1
"lib1","SARS-CoV-2","TCATAATCCTAGCATC",1,33.18,9.92,-0.84,0.08,2.69,1.01,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","TCATAATCGGATAAAA",1,12.05,10.52,-0.25,0.09,2.92,1.06,0,"1 nonsynonymous","E10S",1
"lib1","SARS-CoV-2","TCATAATCTTTAGGGC",2,33.62,8.59,-2.17,0.13,1.82,1.13,0.01,">1 nonsynonymous","C6Y S36F S41N C61S R136M",5
"lib1","SARS-CoV-2","TCATAATGAAACTGAG",7,64.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Q84G N107I S139F C150K",4
"lib1","SARS-CoV-2","TCATAATTATCTTGTT",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67D Y93S W106P G152S T201A",5
"lib1","SARS-CoV-2","TCATAATTGAAGTCTA",6,113.91,9.54,-1.23,0.1,2.49,1.08,0,">1 nonsynonymous","E141W S147C",2
"lib1","SARS-CoV-2","TCATAATTGTTGTACT",5,15.66,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","V37C A42V W106P F126E",4
"lib1","SARS-CoV-2","TCATAATTTGTAGCTA",1,63.87,10.61,-0.16,0.04,2.92,1.03,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","TCATACAACCTCACCA",2,15.71,7.21,-3.55,0.46,1.5,1.16,0.08,">1 nonsynonymous","S108Y P149L",2
"lib1","SARS-CoV-2","TCATACAACTAAGAGG",3,61.23,10.4,-0.37,0.05,2.93,1.05,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","TCATACAAGCTTCCAA",7,131.63,10.72,-0.04,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATACAATATACAAA",11,130.39,10.82,0.05,0.09,2.92,1.02,0,">1 nonsynonymous","N4G I138L",2
"lib1","SARS-CoV-2","TCATACACAGGATAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27N D68M",2
"lib1","SARS-CoV-2","TCATACACATACTATG",1,21.7,8.91,-1.86,0.32,1.5,1.17,0.04,">1 nonsynonymous","C49S K56Q",2
"lib1","SARS-CoV-2","TCATACACCTGCATAA",4,66.23,10.64,-0.12,0.05,2.89,1.03,0,">1 nonsynonymous","F134L F160H",2
"lib1","SARS-CoV-2","TCATACAGTCCCACAA",4,29.49,9.63,-1.13,0.06,2.84,1.04,0,">1 nonsynonymous","N130G N157D",2
"lib1","SARS-CoV-2","TCATACATCACGATTT",3,56.35,10.12,-0.65,0.08,2.72,1.05,0,">1 nonsynonymous","V37L L60I D90Y",3
"lib1","SARS-CoV-2","TCATACATCGATAGCA",7,17.13,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","T15E N92W R136S",3
"lib1","SARS-CoV-2","TCATACATTATTCCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107A S129L",2
"lib1","SARS-CoV-2","TCATACCGATAGATTT",2,33.42,10.66,-0.1,0.05,2.95,1,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","TCATACCGTAAACCAG",9,158.2,10.67,-0.09,0.03,2.94,1,0,">1 nonsynonymous","N58H Q144E",2
"lib1","SARS-CoV-2","TCATACCTAAATAGGC",2,88.69,10.52,-0.25,0.05,2.89,1.06,0,">1 nonsynonymous","Y39R T85D",2
"lib1","SARS-CoV-2","TCATACCTACCAATCT",6,134.08,8.49,-2.27,0.1,2.14,1.1,0,">1 nonsynonymous","W106Q Y119T",2
"lib1","SARS-CoV-2","TCATACCTGACACGAC",3,48.83,10.58,-0.19,0.04,2.91,1.06,0,">1 nonsynonymous","C61R P133A",2
"lib1","SARS-CoV-2","TCATACGAAAATTAAC",7,55.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5S T46V R127L S129K C158R",5
"lib1","SARS-CoV-2","TCATACGACTTGTATA",16,295.33,9.64,-1.13,0.03,2.87,1.06,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","TCATACGATAGTTTCA",5,0.03,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib1","SARS-CoV-2","TCATACGATATACATT",4,0.04,NA,NA,NA,NA,NA,NA,"stop","T3N A18N G116R R124K Q168*",5
"lib1","SARS-CoV-2","TCATACGCCAGTACAT",1,11.05,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","E10C S45L P161D Y175T K198W",5
"lib1","SARS-CoV-2","TCATACGCTTGCCAGC",5,15.81,10.75,-0.01,0.16,2.85,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCATACGGCAACCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F44L D97*",2
"lib1","SARS-CoV-2","TCATACGGTACGCGGG",2,25.02,10.18,-0.58,0.08,2.55,1,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","TCATACGTAGTGATCT",3,44.4,10.2,-0.57,0.08,2.64,1,0,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","TCATACTAGACTAATA",1,83.91,10.28,-0.49,0.07,2.74,1.04,0,">1 nonsynonymous","D90H N151L",2
"lib1","SARS-CoV-2","TCATACTCATTCACAG",9,100.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F17S S36C N64L Q168D",4
"lib1","SARS-CoV-2","TCATACTGAGACTTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* E10V G146M",3
"lib1","SARS-CoV-2","TCATACTTAACAGATT",3,10.61,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","T55F V103M F160I",3
"lib1","SARS-CoV-2","TCATACTTTAGTACAA",2,27.14,6,-4.76,1.82,1.5,1.12,0.01,">1 nonsynonymous","F8M N92Y L125M",3
"lib1","SARS-CoV-2","TCATAGAAATTAGTTC",3,121.84,10.79,0.03,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATAGAAGATAATTA",10,138.67,6.83,-3.93,0.19,1.5,1.15,0.01,">1 nonsynonymous","F12S S36M W106L",3
"lib1","SARS-CoV-2","TCATAGAAGTATAGGT",6,136.65,10.69,-0.07,0.06,2.88,1.08,0,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","TCATAGAATCCAGAGT",7,43.16,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R127P E141L",2
"lib1","SARS-CoV-2","TCATAGAATTTATCCG",3,95.69,9.84,-0.92,0.07,2.54,1.07,0,">1 nonsynonymous","P133T P149T V173L",3
"lib1","SARS-CoV-2","TCATAGATTTCACTAC",1,21.14,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","S36L F134M Y159S F167L S184A",5
"lib1","SARS-CoV-2","TCATAGCAAAGCACTA",1,36.16,10.87,0.11,0.11,2.88,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCATAGCAACTACCAG",10,125.49,10.75,-0.02,0.06,2.89,1.04,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","TCATAGCCCGGTTCCG",3,26.36,10.22,-0.55,0.07,2.92,1,0,">1 nonsynonymous","I28L N107G",2
"lib1","SARS-CoV-2","TCATAGCCGTCCTATG",9,106.71,6.38,-4.38,0.64,1.5,1.16,0.03,">1 nonsynonymous","N58C D90N Y143W G174V",4
"lib1","SARS-CoV-2","TCATAGCGAAACAGGC",7,10.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q E154F N171S",3
"lib1","SARS-CoV-2","TCATAGCGCTTTGAGA",4,36.64,6.56,-4.21,0.31,1.56,1.1,0.02,">1 nonsynonymous","F44L D137G",2
"lib1","SARS-CoV-2","TCATAGCTCCCTAACA",3,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V T15I G83Y I104V Q144T",5
"lib1","SARS-CoV-2","TCATAGCTTGTTCACC",3,76.66,10.72,-0.04,0.05,2.92,1.06,0,"1 nonsynonymous","V115M",1
"lib1","SARS-CoV-2","TCATAGGAACGATAAG",8,29.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D34T G117D G152C",3
"lib1","SARS-CoV-2","TCATAGGATTAACATT",3,6.96,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","Q84H Y91G T100L N109H",4
"lib1","SARS-CoV-2","TCATAGGCCCGTACTT",8,5.88,NA,NA,NA,NA,NA,NA,"stop","K48* I104K S129A",3
"lib1","SARS-CoV-2","TCATAGGCTCTAACGA",5,32.96,6.31,-4.45,0.71,1.5,1.19,0.02,">1 nonsynonymous","T3C S108M N171I",3
"lib1","SARS-CoV-2","TCATAGGGACTGAAAA",5,271.9,9.18,-1.58,0.04,2.88,1.06,0,">1 nonsynonymous","S43P T170L",2
"lib1","SARS-CoV-2","TCATAGGTACATACTT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib1","SARS-CoV-2","TCATAGGTTATTTGAT",4,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I A81H",2
"lib1","SARS-CoV-2","TCATAGTAAAAACAAA",3,7.42,6.93,-3.84,0.6,1.81,1.38,0.05,"1 nonsynonymous","V20M",1
"lib1","SARS-CoV-2","TCATAGTACTCTGCTT",7,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39I F70W G172F",3
"lib1","SARS-CoV-2","TCATAGTCGGCACTGT",2,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I S45L P133M",3
"lib1","SARS-CoV-2","TCATATAAATTACACC",5,28.37,9.78,-0.98,0.1,2.61,1.06,0,">1 nonsynonymous","G9F N58Y A105S",3
"lib1","SARS-CoV-2","TCATATAACAATTGTT",5,89.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N24T N92I",2
"lib1","SARS-CoV-2","TCATATAACATTTCGA",9,151.42,10.04,-0.72,0.09,2.19,1.02,0,">1 nonsynonymous","C102L E141Y H189N",3
"lib1","SARS-CoV-2","TCATATAACGAAAGGG",3,37.62,10.89,0.12,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATATAACTGATCTG",5,44.99,10.82,0.06,0.11,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATATAATATAGGGC",6,37.83,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N4W G51A L60H F167R",4
"lib1","SARS-CoV-2","TCATATACCACTTAAA",6,1.36,NA,NA,NA,NA,NA,NA,"stop","Y143* N157Q A190N",3
"lib1","SARS-CoV-2","TCATATATAATGCATT",7,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V T15S G51D",3
"lib1","SARS-CoV-2","TCATATATATAAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","V71* N120S S129I P149S",4
"lib1","SARS-CoV-2","TCATATATCACTGTGA",9,28.13,6,-4.76,2,1.5,1.39,0.06,">1 nonsynonymous","L38G P54S V77A W106T D112K A192R T201L",7
"lib1","SARS-CoV-2","TCATATATCTACGATT",3,45.43,10.25,-0.51,0.08,2.89,1,0,">1 nonsynonymous","F62W T170K P197S T201L",4
"lib1","SARS-CoV-2","TCATATATTAATATCA",2,6.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y K94Y D112I S139R",4
"lib1","SARS-CoV-2","TCATATATTCGGCTAA",6,120.51,8.28,-2.48,0.17,2.06,1.15,0.01,">1 nonsynonymous","T15S K56V D98Y N109T",4
"lib1","SARS-CoV-2","TCATATATTTAGTTAT",4,13.61,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L131S P161V",2
"lib1","SARS-CoV-2","TCATATCAAAAATCAT",3,19.74,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","A14T N40S Y93F C102S S129L I138A A190T",7
"lib1","SARS-CoV-2","TCATATCAAGATTACC",6,60.04,9.14,-1.63,0.23,1.5,1.01,0.02,">1 nonsynonymous","E10L Q84S Y123W R136T",4
"lib1","SARS-CoV-2","TCATATCCCAGAAAGT",1,1.79,NA,NA,NA,NA,NA,NA,"stop","D34* C49R R73S T201I",4
"lib1","SARS-CoV-2","TCATATCCTAGATTAG",3,28.7,8.34,-2.43,0.16,1.62,1.16,0.01,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","TCATATCGAATGAAAT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51P P149S P169G",3
"lib1","SARS-CoV-2","TCATATCGCAGTCTCA",3,13.32,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","I2F V77Y G146C T170L",4
"lib1","SARS-CoV-2","TCATATCTATGCCTAA",8,15.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P D59A Y143C",3
"lib1","SARS-CoV-2","TCATATCTGATGATGT",7,165.58,10.14,-0.63,0.05,2.88,1.03,0,"1 nonsynonymous","L111S",1
"lib1","SARS-CoV-2","TCATATCTTTTATCGC",3,9.26,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39C S45R Y123L E135K F160L T201E",6
"lib1","SARS-CoV-2","TCATATGACTGATAAC",5,30.65,8.94,-1.82,0.16,1.69,1.17,0.01,">1 nonsynonymous","D90G F160D S184L",3
"lib1","SARS-CoV-2","TCATATGAGGGTACTA",7,91.97,8.28,-2.49,0.18,2.18,1.12,0.01,">1 nonsynonymous","Y35T N157K A190E",3
"lib1","SARS-CoV-2","TCATATGATAACAAGG",4,0.36,NA,NA,NA,NA,NA,NA,"stop","A33* S113T E141T",3
"lib1","SARS-CoV-2","TCATATGCAGACCATT",2,78.82,10.74,-0.02,0.05,2.9,1.05,0,"1 nonsynonymous","T3V",1
"lib1","SARS-CoV-2","TCATATGGTTATACAA",5,13.4,6.77,-4,0.42,1.5,1.08,0.03,">1 nonsynonymous","C61Y G86L A145F G174E S184M",5
"lib1","SARS-CoV-2","TCATATGTTGAGACGT",5,82.89,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","G86N R127H N157L",3
"lib1","SARS-CoV-2","TCATATTACCCCCACA",4,69.71,10.62,-0.15,0.03,2.93,1.01,0,">1 nonsynonymous","S41Y T46R A190P",3
"lib1","SARS-CoV-2","TCATATTCAAGTGCAA",2,15.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37S Y66S R136E G155S T201K",5
"lib1","SARS-CoV-2","TCATATTCACGAAGGA",3,1.55,NA,NA,NA,NA,NA,NA,"stop","F17P S43A G51S L60R S113*",5
"lib1","SARS-CoV-2","TCATATTGATCCATTA",1,19.35,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L38A P96M",2
"lib1","SARS-CoV-2","TCATATTTCTACTAGG",5,40.39,10.78,0.02,0.08,2.89,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TCATATTTGAGGAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* A105N",2
"lib1","SARS-CoV-2","TCATATTTTAAAAGAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","E10* E141D",2
"lib1","SARS-CoV-2","TCATATTTTTAAAGAT",7,58.24,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","D98N D112L Y143S",3
"lib1","SARS-CoV-2","TCATCAAACCAAACTC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A81* G101S",2
"lib1","SARS-CoV-2","TCATCAACTAGCTAAG",2,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T K56W K94L K128L",4
"lib1","SARS-CoV-2","TCATCAAGAAAGTACA",1,28.45,9.83,-0.93,0.12,2.42,1.04,0.01,">1 nonsynonymous","K56P G116L V153K",3
"lib1","SARS-CoV-2","TCATCAAGCGGAGTAG",18,4.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60H",1
"lib1","SARS-CoV-2","TCATCAATAGATACAT",4,30.07,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","L5S G9V L38W D98E D112R",5
"lib1","SARS-CoV-2","TCATCAATGTTACTTT",5,62.93,10.71,-0.05,0.05,2.96,1.02,0,">1 nonsynonymous","S41R L187T",2
"lib1","SARS-CoV-2","TCATCACAACAAATTC",2,16.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T100L P133T V180N",3
"lib1","SARS-CoV-2","TCATCACAATAGAAAT",3,38.95,7.17,-3.6,0.22,1.85,1.15,0.01,">1 nonsynonymous","N120M C158S",2
"lib1","SARS-CoV-2","TCATCACATTGGCAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S D112L V153D",3
"lib1","SARS-CoV-2","TCATCACCCCCACCAG",4,37.35,10.64,-0.12,0.08,2.9,1.05,0,">1 nonsynonymous","V32S A192I",2
"lib1","SARS-CoV-2","TCATCACCTAACACTA",4,102.66,6.4,-4.37,0.53,1.5,1.14,0.02,">1 nonsynonymous","T170W Y175S",2
"lib1","SARS-CoV-2","TCATCACTACTCCCTG",1,23.38,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9S S41A P54L D98R C158N",5
"lib1","SARS-CoV-2","TCATCACTGTCCACGG",9,34.89,6,-4.76,1.48,3,1.05,0,">1 nonsynonymous","S53Y L131Q P169V",3
"lib1","SARS-CoV-2","TCATCAGGAGAAAACC",4,48.07,10.72,-0.05,0.1,2.89,1.07,0,">1 nonsynonymous","A33G Y178H",2
"lib1","SARS-CoV-2","TCATCAGGCTTAACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","E10V Q84F L95* Y121M F126W",5
"lib1","SARS-CoV-2","TCATCATACCACCAAT",1,48.03,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S45P Y119L L131E T170K",4
"lib1","SARS-CoV-2","TCATCATCATTTGATA",2,33.43,7.17,-3.6,0.33,1.5,1.16,0.02,">1 nonsynonymous","K56L D68A F126H",3
"lib1","SARS-CoV-2","TCATCATCGGAATTTG",1,12.5,10.38,-0.39,0.06,2.96,1,0,">1 nonsynonymous","F8L S41L",2
"lib1","SARS-CoV-2","TCATCATGAACGGACT",6,47.98,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23L D90H L122R",3
"lib1","SARS-CoV-2","TCATCATGATACCTAA",6,37.5,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","L38Q G101C Y123N",3
"lib1","SARS-CoV-2","TCATCATTGGATGATA",7,5.7,NA,NA,NA,NA,NA,NA,"stop","S41N Y119*",2
"lib1","SARS-CoV-2","TCATCCACAGAGACCG",2,24.75,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9N P54E G117C C158G",4
"lib1","SARS-CoV-2","TCATCCACCGCGAGCG",6,3.9,NA,NA,NA,NA,NA,NA,"stop","G9I V77*",2
"lib1","SARS-CoV-2","TCATCCACGTAAAGTT",4,45.07,10.12,-0.64,0.07,2.85,1.04,0,">1 nonsynonymous","Y91W G146S",2
"lib1","SARS-CoV-2","TCATCCACTTAAGTGG",1,29.62,10.55,-0.21,0.05,2.9,1.08,0,">1 nonsynonymous","R16M S41R V173R",3
"lib1","SARS-CoV-2","TCATCCAGAGGATAAA",3,82.7,10.35,-0.41,0.04,2.85,1.06,0,">1 nonsynonymous","V37Y Y121H P149L",3
"lib1","SARS-CoV-2","TCATCCAGATGTGTTT",7,94.78,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38T I88Y",2
"lib1","SARS-CoV-2","TCATCCATCCTACAGC",4,40.74,10.68,-0.08,0.05,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATCCATTTAAATTG",12,207.04,10.61,-0.16,0.03,2.89,1.04,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TCATCCCATCGCAAAC",1,9.51,6,-4.76,1.92,3,1.09,0,">1 nonsynonymous","N1L V65L C102Y",3
"lib1","SARS-CoV-2","TCATCCCATTTGTTAA",2,24.61,10.21,-0.56,0.06,2.83,1.04,0,">1 nonsynonymous","N13G V32R S43N N64Q H189Y",5
"lib1","SARS-CoV-2","TCATCCCGGAGACTGA",10,42.18,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","D90E Y93G A105E",3
"lib1","SARS-CoV-2","TCATCCGATATTAGTT",1,25.54,9.11,-1.66,0.09,2.84,1.09,0,">1 nonsynonymous","K87R D98A L122K Q168I A190V",5
"lib1","SARS-CoV-2","TCATCCTCCTCTACTA",9,125.25,10.72,-0.04,0.09,2.91,1.05,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","TCATCCTGAAAACTTT",5,70.35,7.33,-3.44,0.27,1.5,1.13,0.02,">1 nonsynonymous","R179A T201W",2
"lib1","SARS-CoV-2","TCATCCTTACACATCT",2,57.09,10.83,0.06,0.08,2.86,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TCATCGAGACAAAAGG",5,71.37,9.77,-1,0.12,2.29,1.02,0,">1 nonsynonymous","F8G C61V S200M",3
"lib1","SARS-CoV-2","TCATCGATATTGGGAC",6,73.3,10.71,-0.05,0.08,2.9,1.05,0,"1 nonsynonymous","D97V",1
"lib1","SARS-CoV-2","TCATCGATTGAGGTTT",5,10.32,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L5W A33S A89C P96R G174L",5
"lib1","SARS-CoV-2","TCATCGCTATTTACAA",4,38.88,6.97,-3.8,0.36,1.5,1.15,0.03,">1 nonsynonymous","Y143A V180M",2
"lib1","SARS-CoV-2","TCATCGGATCCCCTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* L125G Q144S",3
"lib1","SARS-CoV-2","TCATCGTATTACGGAC",2,77.8,10.42,-0.35,0.06,2.8,1.08,0,">1 nonsynonymous","Y91N A190R",2
"lib1","SARS-CoV-2","TCATCGTCCATTTAAT",2,5.56,10.22,-0.55,0.12,2.76,1.19,0.01,">1 nonsynonymous","G9R S36W",2
"lib1","SARS-CoV-2","TCATCGTCTTAAAGGC",2,10.99,10.61,-0.15,0.07,2.98,1,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","TCATCGTTAACAAAAG",2,753.97,8.72,-2.04,0.19,1.5,1,0.01,">1 nonsynonymous","G74I G155A",2
"lib1","SARS-CoV-2","TCATCTAACATATTCC",7,49.37,6.41,-4.36,0.46,1.5,1.19,0.02,">1 nonsynonymous","L95R F134W T201D",3
"lib1","SARS-CoV-2","TCATCTAACCCAAGAA",3,0.82,NA,NA,NA,NA,NA,NA,"stop","K26L S41G C49V K87N P96* G152W",6
"lib1","SARS-CoV-2","TCATCTAACTATAGAT",4,3.87,NA,NA,NA,NA,NA,NA,"stop","Y66R G83* P96F R127P",4
"lib1","SARS-CoV-2","TCATCTAATCCCTGCA",2,30.52,6.17,-4.59,0.69,1.5,1.14,0.02,"1 nonsynonymous","C158P",1
"lib1","SARS-CoV-2","TCATCTACCGCAAGCG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y S41C L95W",3
"lib1","SARS-CoV-2","TCATCTACGGACCTAA",1,21.67,8.85,-1.91,0.12,2.54,1.12,0.01,">1 nonsynonymous","D90K T170N Y178N",3
"lib1","SARS-CoV-2","TCATCTATAACATGCA",5,23.78,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G51P Y119P P133V",3
"lib1","SARS-CoV-2","TCATCTATACTAACAA",5,0.79,NA,NA,NA,NA,NA,NA,"stop","E10* S41P Y66Q",3
"lib1","SARS-CoV-2","TCATCTATCTTTAAGA",1,8.23,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","K87S N118S Q144M N157S",4
"lib1","SARS-CoV-2","TCATCTATGACACTCC",5,121.18,8.44,-2.33,0.1,2.52,1.09,0,">1 nonsynonymous","L60S Y175C",2
"lib1","SARS-CoV-2","TCATCTCAATCACTAC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","T3L S41* P161S",3
"lib1","SARS-CoV-2","TCATCTCAGAAGCCAA",4,44.18,10.76,-0.01,0.04,2.94,1,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","TCATCTCCAATTATTT",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62W Y93M D97S",3
"lib1","SARS-CoV-2","TCATCTCCCACTATCT",1,22.77,6,-4.76,1.11,1.5,1.17,0.01,">1 nonsynonymous","V65K V103M Y119R C158F",4
"lib1","SARS-CoV-2","TCATCTCCGAGCAAGC",6,69.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6F I28R Y39L I88W P169L",5
"lib1","SARS-CoV-2","TCATCTCGTTCAGTTA",1,6.28,10.16,-0.6,0.16,2.92,1.12,0.01,">1 nonsynonymous","I2V T140P",2
"lib1","SARS-CoV-2","TCATCTCTCCCATAGA",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R T63L Y91L I104K",4
"lib1","SARS-CoV-2","TCATCTGAACACGGTA",5,46.91,8.61,-2.16,0.14,2.37,1.16,0.01,">1 nonsynonymous","F12L C61S N151Y G166K",4
"lib1","SARS-CoV-2","TCATCTGTACAAAACG",8,37.89,6.35,-4.41,0.69,1.5,1.15,0.04,">1 nonsynonymous","C49S D112L F126I G172L",4
"lib1","SARS-CoV-2","TCATCTGTTAGAACTG",1,18.73,10.62,-0.15,0.09,2.76,1.14,0,">1 nonsynonymous","N1V L122C",2
"lib1","SARS-CoV-2","TCATCTGTTTGGCCGC",4,47.82,10.45,-0.31,0.08,2.8,1.03,0,">1 nonsynonymous","S41D D90Q P133D",3
"lib1","SARS-CoV-2","TCATCTTAGGCAACCA",2,13.89,10.41,-0.35,0.06,2.93,1,0,">1 nonsynonymous","L162M K199M",2
"lib1","SARS-CoV-2","TCATGAAAGAATACTG",2,66.28,10.19,-0.57,0.05,2.87,1,0,">1 nonsynonymous","L5S W106Y",2
"lib1","SARS-CoV-2","TCATGAACTCACACAA",13,2.54,NA,NA,NA,NA,NA,NA,"stop","E10* N120M K128D R136N",4
"lib1","SARS-CoV-2","TCATGAATGTATACAT",10,39.29,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A33L D59G L95K",3
"lib1","SARS-CoV-2","TCATGACCAGGTGGCT",2,32.95,6.59,-4.17,0.24,1.5,1.06,0.01,">1 nonsynonymous","Y21K G116Q",2
"lib1","SARS-CoV-2","TCATGAGTCTAGAAGC",2,24.82,10.02,-0.74,0.12,2.66,1,0,">1 nonsynonymous","F44S A105F",2
"lib1","SARS-CoV-2","TCATGATACCCCATCC",7,169.16,10.63,-0.14,0.05,2.92,1.04,0,"1 nonsynonymous","G116R",1
"lib1","SARS-CoV-2","TCATGATCGTTAGTTC",1,35.15,10.32,-0.44,0.06,2.89,1,0,">1 nonsynonymous","G116L E141S",2
"lib1","SARS-CoV-2","TCATGCAACCAGCGAT",1,1.55,NA,NA,NA,NA,NA,NA,"stop","A42* S53W K94A",3
"lib1","SARS-CoV-2","TCATGCAAGGTCTACC",2,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86W V103Y",2
"lib1","SARS-CoV-2","TCATGCGAATACCCCC",1,20.13,9.98,-0.79,0.14,2.25,1.11,0.01,">1 nonsynonymous","A14Y C61H T85K",3
"lib1","SARS-CoV-2","TCATGCGATAACAATA",2,21.85,10.27,-0.49,0.05,2.88,1,0,">1 nonsynonymous","N4S E10Y P54K F156L N171Y",5
"lib1","SARS-CoV-2","TCATGGCATCTTTGAA",2,54.68,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14K N58T F70V E186D T201M",5
"lib1","SARS-CoV-2","TCATGGCGTTCTCTGC",4,34.5,10.79,0.02,0.07,2.89,1.08,0,"1 nonsynonymous","N64E",1
"lib1","SARS-CoV-2","TCATGGCTCGCCCTAG",2,12.47,6,-4.76,2,2.31,1.21,0.01,">1 nonsynonymous","C49R G116A",2
"lib1","SARS-CoV-2","TCATGGGAGCATTCGG",2,13.65,9.61,-1.16,0.21,1.69,1.17,0.02,">1 nonsynonymous","R27S P82I",2
"lib1","SARS-CoV-2","TCATGTGTCCTACAAT",2,94.22,10.61,-0.15,0.05,2.93,1.03,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","TCATGTTACACATCGC",5,44.73,10.7,-0.06,0.09,2.86,1.14,0,"1 nonsynonymous","D59S",1
"lib1","SARS-CoV-2","TCATTAAAAAAACCAA",5,132.09,8.89,-1.87,0.1,2.46,1.13,0,">1 nonsynonymous","Y119R F134I",2
"lib1","SARS-CoV-2","TCATTAAAAAAATGTC",7,86.83,9.94,-0.83,0.06,2.72,1.1,0,">1 nonsynonymous","I72C E154C",2
"lib1","SARS-CoV-2","TCATTAAAAACCAGCT",3,17.49,6.95,-3.81,0.32,1.5,1.15,0.02,">1 nonsynonymous","D34F L57V G117H A190P",4
"lib1","SARS-CoV-2","TCATTAAAAGACGATA",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M D98F",2
"lib1","SARS-CoV-2","TCATTAAACACCGTGC",9,55.94,7.46,-3.3,0.43,1.5,1,0.07,">1 nonsynonymous","L60I G74S C158L T201R",4
"lib1","SARS-CoV-2","TCATTAAACCGTGCTG",5,9.5,7.9,-2.86,0.28,1.86,1.12,0.05,">1 nonsynonymous","N13H Q79H F99Q",3
"lib1","SARS-CoV-2","TCATTAAACTGTATGT",1,39.08,6.22,-4.55,0.76,1.5,1.08,0.03,">1 nonsynonymous","G83D I88N I138T",3
"lib1","SARS-CoV-2","TCATTAAAGGTGCGTA",6,146.08,10.83,0.06,0.08,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATTAAATATCTCAT",3,122.34,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","L5T N13F I138H L162K",4
"lib1","SARS-CoV-2","TCATTAAATCATCAAT",3,16.33,6,-4.76,1.38,1.5,1.15,0.04,">1 nonsynonymous","N64S V77D D90P F126V",4
"lib1","SARS-CoV-2","TCATTAACAATAAATG",2,0.59,NA,NA,NA,NA,NA,NA,"stop","F99* N120I T140G",3
"lib1","SARS-CoV-2","TCATTAACACCATCCA",4,41.45,10.67,-0.1,0.04,2.95,1.03,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","TCATTAACGCAGCAAG",4,49.59,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T15R R25C K114S Y175P",4
"lib1","SARS-CoV-2","TCATTAACGGCATACT",1,27.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15F V37W C61N I104W L122P Y143L",6
"lib1","SARS-CoV-2","TCATTAACTTTAAGAT",3,43.84,9.36,-1.41,0.09,2.71,1.08,0,">1 nonsynonymous","C31Q Y123R",2
"lib1","SARS-CoV-2","TCATTAATAATGTGAC",2,30.13,6,-4.76,1.78,1.5,1.2,0.02,">1 nonsynonymous","N109Q R179L",2
"lib1","SARS-CoV-2","TCATTAATCATAATAT",2,27.44,9.26,-1.51,0.14,1.78,1.1,0.01,">1 nonsynonymous","I2R Q84R R136V P149Y",4
"lib1","SARS-CoV-2","TCATTAATGAGAGATC",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M E76G N110H",3
"lib1","SARS-CoV-2","TCATTAATGTAGTATT",2,28.97,10.82,0.06,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATTACAAATTAGGC",4,14.05,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T55W F70L A81R Y143I",4
"lib1","SARS-CoV-2","TCATTACAATATTGAC",1,7.71,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","Y21K",1
"lib1","SARS-CoV-2","TCATTACACAAAACTT",1,22.2,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S19V Y35F K87W F99S Y143S T148N",6
"lib1","SARS-CoV-2","TCATTACACGACCAAG",10,107.47,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","R25T N107M L122R Y178K",4
"lib1","SARS-CoV-2","TCATTACAGGAAATTA",3,85.04,8.75,-2.01,0.2,1.51,1.22,0.02,">1 nonsynonymous","F12K S43Y F62L",3
"lib1","SARS-CoV-2","TCATTACAGTCGCGCG",5,0.27,NA,NA,NA,NA,NA,NA,"stop","C49* L57T Q84E W106L K128R",5
"lib1","SARS-CoV-2","TCATTACATGTCTTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* L38H L125H",3
"lib1","SARS-CoV-2","TCATTACCCTGTACCT",2,8.19,8.9,-1.87,0.38,1.55,1.08,0.06,">1 nonsynonymous","S69G S113G",2
"lib1","SARS-CoV-2","TCATTACCTGAACATC",1,20.34,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y93E E141L P161L",3
"lib1","SARS-CoV-2","TCATTACGCATATCTC",9,1.34,NA,NA,NA,NA,NA,NA,"stop","D75* A81Y W106L K128V E141*",5
"lib1","SARS-CoV-2","TCATTACTCCTTTAAT",1,7.17,7.21,-3.55,0.3,2.41,1.11,0.01,">1 nonsynonymous","V103P D137F Y143C T201L",4
"lib1","SARS-CoV-2","TCATTACTCGCAAAAT",1,17.33,10.83,0.07,0.09,2.91,1.07,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TCATTAGACATACAAT",4,24.14,9.08,-1.69,0.27,1.5,1,0.04,">1 nonsynonymous","I2Y A81N Y91H",3
"lib1","SARS-CoV-2","TCATTAGACGTGCAAA",3,15.76,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N13Y A89P L122I G146V",4
"lib1","SARS-CoV-2","TCATTAGACTGGACTA",2,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q A81H L122V",3
"lib1","SARS-CoV-2","TCATTAGAGTACTCAC",3,6.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41L A89W T148I",3
"lib1","SARS-CoV-2","TCATTAGCCTAGTATA",4,5.01,NA,NA,NA,NA,NA,0.44,">1 nonsynonymous","L5H T15G Y50I L125W G155S V180G",6
"lib1","SARS-CoV-2","TCATTAGGCTGAAAGA",1,11.99,6.16,-4.6,1.5,1.5,1.3,0.08,">1 nonsynonymous","S36R T55R P177G",3
"lib1","SARS-CoV-2","TCATTAGTCTATTAAT",3,3.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104N",1
"lib1","SARS-CoV-2","TCATTATAAACCGTCC",2,8.04,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25N F70L Y119C E154Y S200P",5
"lib1","SARS-CoV-2","TCATTATAACAGAACT",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V D75F R127T F167M",4
"lib1","SARS-CoV-2","TCATTATAATACCTCA",7,8.04,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22N P54H K94P",3
"lib1","SARS-CoV-2","TCATTATACCGCACTA",7,108.01,10.63,-0.13,0.08,2.74,1.07,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","TCATTATAGCTGGAGT",1,8.31,6,-4.76,1.71,3,1.14,0.01,">1 nonsynonymous","C31P D59M V173N V180Y",4
"lib1","SARS-CoV-2","TCATTATCAGCATTCA",10,47.65,6,-4.76,2,3,1.23,0,">1 nonsynonymous","N4G C150Y G174R V180M T201S",5
"lib1","SARS-CoV-2","TCATTATCTAACTAAA",1,52.29,10.65,-0.11,0.08,2.84,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","TCATTATGACAAGACA",3,26.97,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S108N R124Q",2
"lib1","SARS-CoV-2","TCATTATTATCGCCTA",7,152.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S36G S113F Y123L G172D V180I",5
"lib1","SARS-CoV-2","TCATTATTGTGTATAT",1,8.78,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","V115S R179C T201G",3
"lib1","SARS-CoV-2","TCATTATTTAAATCTG",3,40.26,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35E F47V V52L W106G G117C S139N",6
"lib1","SARS-CoV-2","TCATTATTTAGAAAAT",3,47.82,10.02,-0.74,0.08,2.78,1.03,0,">1 nonsynonymous","L131M N151V",2
"lib1","SARS-CoV-2","TCATTCAAGAGAATCG",4,14.42,6,-4.76,2,3,1.21,0,">1 nonsynonymous","P82L P96T",2
"lib1","SARS-CoV-2","TCATTCAATAATCAAT",4,56.41,8.27,-2.49,0.22,1.89,1.07,0.02,">1 nonsynonymous","N107L Y119R",2
"lib1","SARS-CoV-2","TCATTCAATATCCGAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","Q79K Y143* P149S",3
"lib1","SARS-CoV-2","TCATTCACCCACTGTC",5,49.64,10.67,-0.1,0.09,2.67,1.05,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","TCATTCACTAGATCAC",2,27.18,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2K E10T T140G C150K K198L",5
"lib1","SARS-CoV-2","TCATTCAGATGTTGGG",9,117.39,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6F F99D",2
"lib1","SARS-CoV-2","TCATTCATGACAAACC",4,6.06,6,-4.76,2,1.5,1.01,0,">1 nonsynonymous","A14K T46L D90S V180H",4
"lib1","SARS-CoV-2","TCATTCATTCAAGATG",5,107.84,10.76,-0.01,0.04,2.93,1.02,0,">1 nonsynonymous","L60K Y91F",2
"lib1","SARS-CoV-2","TCATTCATTCATGTCG",5,82.05,10.6,-0.17,0.05,2.89,1.03,0,">1 nonsynonymous","A42Y K132R",2
"lib1","SARS-CoV-2","TCATTCCCGCTATAAC",3,22.69,10.74,-0.03,0.04,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATTCCGGAGGCTCA",7,52.46,9.63,-1.13,0.11,1.95,1.06,0,">1 nonsynonymous","L57S P133S",2
"lib1","SARS-CoV-2","TCATTCCTATGTCTAA",2,11.25,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F99C F167R",2
"lib1","SARS-CoV-2","TCATTCGAGTTACCCG",2,38.92,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","E10R N107S Y119G S139V C158R",5
"lib1","SARS-CoV-2","TCATTCGATAGATACA",1,11.39,8.27,-2.5,0.29,1.88,1.21,0.03,">1 nonsynonymous","I2L F44K R73A R78W N151K",5
"lib1","SARS-CoV-2","TCATTCTAGGAAACCC",7,123.26,10.78,0.02,0.09,2.87,1.07,0,"1 nonsynonymous","N24S",1
"lib1","SARS-CoV-2","TCATTCTCCAAACGGG",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S Y50H V77T D90T P96L I104Q",6
"lib1","SARS-CoV-2","TCATTCTCCATAATTA",5,91.68,8.94,-1.83,0.18,1.5,1.16,0.01,">1 nonsynonymous","R16N V52D F62I K128N N151I S200I",6
"lib1","SARS-CoV-2","TCATTCTGGTCCACAG",5,0.36,NA,NA,NA,NA,NA,NA,"stop","L5F V20N N30D K48Q Y93L R127M K198*",7
"lib1","SARS-CoV-2","TCATTCTTAATCACCT",12,0.72,NA,NA,NA,NA,NA,NA,"stop","S45* L60M D90T Y143P",4
"lib1","SARS-CoV-2","TCATTCTTCTTGTTGT",1,0.64,NA,NA,NA,NA,NA,NA,"stop","S41N Y66G L95*",3
"lib1","SARS-CoV-2","TCATTGAAACAGCTTG",3,49.82,10.72,-0.04,0.08,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCATTGAAATACCACG",2,0.69,NA,NA,NA,NA,NA,NA,"stop","A89M W106* L131S Y178V T201K",5
"lib1","SARS-CoV-2","TCATTGACCCACTAGA",16,142.89,6.27,-4.5,0.52,1.5,1.18,0.01,">1 nonsynonymous","T85K D98F C150I E154G",4
"lib1","SARS-CoV-2","TCATTGACTACCAAGA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69C I88K I142M",3
"lib1","SARS-CoV-2","TCATTGACTCCGAACA",6,41.38,9.83,-0.93,0.11,2.13,1.01,0.01,">1 nonsynonymous","C61L T100S I138F",3
"lib1","SARS-CoV-2","TCATTGAGTCGATCCT",4,18.14,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","P96H C102D N157L",3
"lib1","SARS-CoV-2","TCATTGCAAAGAAATC",6,66.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D68L V77K K94R K114T",4
"lib1","SARS-CoV-2","TCATTGCAGGGAATTG",12,188.92,10.5,-0.26,0.04,2.94,1.02,0,"1 nonsynonymous","S139C",1
"lib1","SARS-CoV-2","TCATTGCCCCTCTCAA",3,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H Q144Y P161S",3
"lib1","SARS-CoV-2","TCATTGCGCTCTTGCT",1,28.92,10.77,0,0.15,2.85,1.07,0.01,">1 nonsynonymous","T55S K198A",2
"lib1","SARS-CoV-2","TCATTGCGTAATTTAT",1,16.95,10.78,0.01,0.11,2.94,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCATTGCTGGAACACA",11,130.15,10.77,0.01,0.07,2.88,1.06,0,">1 nonsynonymous","N130A K199M",2
"lib1","SARS-CoV-2","TCATTGGAACCCAATT",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I C49R N151Y",3
"lib1","SARS-CoV-2","TCATTGGAATGGCCGT",4,85.55,9.16,-1.6,0.14,2.12,1.09,0.01,">1 nonsynonymous","F17L K87N N130M",3
"lib1","SARS-CoV-2","TCATTGTAACATGAGG",6,41.85,9.59,-1.18,0.14,1.85,1.15,0.01,">1 nonsynonymous","S53P L122K L131Y",3
"lib1","SARS-CoV-2","TCATTGTAGTTAATCC",1,21.79,8.3,-2.46,0.24,1.96,1.27,0.02,">1 nonsynonymous","G9E K56S W106R G117T",4
"lib1","SARS-CoV-2","TCATTGTCATGATCAA",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94A A105T",2
"lib1","SARS-CoV-2","TCATTGTGCGCACTTT",12,207.44,10.8,0.04,0.06,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TCATTGTTGCAGGATT",1,101.78,10.54,-0.23,0.04,2.89,1.05,0,"1 nonsynonymous","Y178T",1
"lib1","SARS-CoV-2","TCATTTAAAACAAGAT",3,12.03,6.03,-4.73,1.33,2.21,1.44,0.03,"1 nonsynonymous","L183S",1
"lib1","SARS-CoV-2","TCATTTACAGATTCTT",1,67.79,10.62,-0.14,0.07,2.96,1.04,0,">1 nonsynonymous","G83F T201S",2
"lib1","SARS-CoV-2","TCATTTACATCTGTAG",2,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V C31Y G74L G86K P169D",5
"lib1","SARS-CoV-2","TCATTTACTAACCATA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9E L122* P133S",3
"lib1","SARS-CoV-2","TCATTTACTAATGTGT",1,6.88,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34Y G101V S113P L125T F167Y",5
"lib1","SARS-CoV-2","TCATTTAGAAACCGAT",5,72.92,10.17,-0.59,0.04,2.79,1.03,0,">1 nonsynonymous","T15F F160S",2
"lib1","SARS-CoV-2","TCATTTATGATTAAAT",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F P133V",2
"lib1","SARS-CoV-2","TCATTTATGTAAACCA",1,29.55,10.81,0.04,0.06,2.95,1.02,0,"1 nonsynonymous","E10A",1
"lib1","SARS-CoV-2","TCATTTATTAGAAAAA",5,55.15,7.64,-3.13,0.27,1.5,1.1,0.02,">1 nonsynonymous","G74V K114E",2
"lib1","SARS-CoV-2","TCATTTATTATAACTC",9,71.06,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","N30A W106H Y143L",3
"lib1","SARS-CoV-2","TCATTTCAAAGATGAA",9,1.12,NA,NA,NA,NA,NA,NA,"stop","I2* S41L V71R Q84L L183D",5
"lib1","SARS-CoV-2","TCATTTCAAATTCTGG",1,24.03,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","A33R L38S T46I L95G L131Y Q144R T170Q",7
"lib1","SARS-CoV-2","TCATTTCCCTCGTTCT",2,1.87,NA,NA,NA,NA,NA,NA,"stop","T3L R127T V173M S184*",4
"lib1","SARS-CoV-2","TCATTTCGCTTACGAC",1,77.15,8.8,-1.97,0.18,2.39,1.22,0.01,">1 nonsynonymous","D59V A145R",2
"lib1","SARS-CoV-2","TCATTTCTCTAATGGA",5,59.45,9.76,-1,0.16,2.03,1.1,0.01,">1 nonsynonymous","P96S L122V E141F",3
"lib1","SARS-CoV-2","TCATTTGACAAAACCC",3,31.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A T63N Q144L C158G",4
"lib1","SARS-CoV-2","TCATTTGATAACTATG",4,22.33,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y50N Y121C",2
"lib1","SARS-CoV-2","TCATTTGCCGGCCGCG",6,24.72,8.11,-2.65,0.37,1.5,1,0.05,">1 nonsynonymous","N58Y R73L S129V T170L",4
"lib1","SARS-CoV-2","TCATTTTATACAATTA",6,143.41,6,-4.76,0.88,1.5,1.15,0,">1 nonsynonymous","P7D L60V P177V",3
"lib1","SARS-CoV-2","TCATTTTATGTAGATA",4,43.84,10.73,-0.03,0.05,2.87,1.08,0,"1 nonsynonymous","K198L",1
"lib1","SARS-CoV-2","TCATTTTCGGGATAAA",2,18.42,9.9,-0.86,0.22,1.92,1.02,0.01,"1 nonsynonymous","F17C",1
"lib1","SARS-CoV-2","TCATTTTGAAAATTAA",5,61.36,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L60T G83L N92M D98E Y121W",5
"lib1","SARS-CoV-2","TCATTTTTAAGAGGTT",1,47.53,10.81,0.04,0.08,2.91,1.04,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","TCATTTTTCACTGCAA",1,38.8,8.15,-2.61,0.28,1.73,1.2,0.03,">1 nonsynonymous","A33K L60Q F126S",3
"lib1","SARS-CoV-2","TCATTTTTCTCAAAAT",8,66.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Y A105H",2
"lib1","SARS-CoV-2","TCCAAAAAAAAACAAC",8,671.16,9.98,-0.78,0.05,2.81,1.04,0,">1 nonsynonymous","I104A N130S G174L",3
"lib1","SARS-CoV-2","TCCAAAAAACGCAATC",1,14.26,9.99,-0.77,0.2,2.49,1.12,0.01,">1 nonsynonymous","V11A T201S",2
"lib1","SARS-CoV-2","TCCAAAAAAGGATCGG",1,13.59,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5P S36L P82G Y143P",4
"lib1","SARS-CoV-2","TCCAAAAAATCACAAA",13,93.72,10.3,-0.47,0.04,2.91,1.01,0,">1 nonsynonymous","N30S D98G N120K",3
"lib1","SARS-CoV-2","TCCAAAAAATCATAAA",6,65.06,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V71S Y93H Y121V F160V",4
"lib1","SARS-CoV-2","TCCAAAAACGGAGGGA",4,0.8,NA,NA,NA,NA,NA,NA,"stop","R124M K199*",2
"lib1","SARS-CoV-2","TCCAAAAAGCAGCATG",5,95.06,9.96,-0.8,0.05,2.09,1.03,0,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","TCCAAAAAGTACACCC",1,23.2,10.97,0.21,0.11,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAAAAAGTACATAT",2,17.51,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","G86P Y165T",2
"lib1","SARS-CoV-2","TCCAAAAATTGGACAG",6,32.06,10.31,-0.45,0.09,2.74,1,0,">1 nonsynonymous","Y91N Q144N",2
"lib1","SARS-CoV-2","TCCAAAACAAATCCTT",4,65.04,10.53,-0.23,0.03,2.92,1.03,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","TCCAAAAGACGAGTTG",2,35.76,9.38,-1.38,0.3,1.5,1,0.05,"1 nonsynonymous","P82E",1
"lib1","SARS-CoV-2","TCCAAAAGCAATAAAA",1,24.27,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6S V32A W106Y D112Q",4
"lib1","SARS-CoV-2","TCCAAAAGCGATATAA",6,13.19,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P82V N109D P149L G174W",4
"lib1","SARS-CoV-2","TCCAAAATCGTTCAGA",7,77.19,10.02,-0.74,0.06,1.91,1.03,0,">1 nonsynonymous","F8E A42Q",2
"lib1","SARS-CoV-2","TCCAAAATGCCGTTAG",11,2.22,NA,NA,NA,NA,NA,NA,"stop","V153* Y175I",2
"lib1","SARS-CoV-2","TCCAAAATGCGAAACA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","TCCAAAATGTATTCCT",5,97.8,10.82,0.05,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAAAATTTAATATT",2,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68P G101E N107D",3
"lib1","SARS-CoV-2","TCCAAACAAGCCTGCT",1,37.65,9.99,-0.78,0.13,2.44,1,0.01,">1 nonsynonymous","G86S L188N T201V",3
"lib1","SARS-CoV-2","TCCAAACATGTTCTGG",10,12.54,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","D90L C102A Y123R V180S",4
"lib1","SARS-CoV-2","TCCAAACATTGCATTT",1,13.09,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20G C49R Q79R",3
"lib1","SARS-CoV-2","TCCAAACCGAGCGGGA",4,80.05,10.69,-0.08,0.04,2.94,1,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","TCCAAACGCACGTGGC",5,60.88,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A89H C150I",2
"lib1","SARS-CoV-2","TCCAAACTAATCCTTG",4,45.27,10.7,-0.06,0.07,2.89,1.06,0,"1 nonsynonymous","L5M",1
"lib1","SARS-CoV-2","TCCAAACTATTGAAAT",6,37.29,8.89,-1.87,0.21,1.51,1.19,0.02,">1 nonsynonymous","P54A C61P S69L K198F",4
"lib1","SARS-CoV-2","TCCAAACTGCAACCCT",1,56.04,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K87S D97S W106L N130E Y143S T148P F156N",7
"lib1","SARS-CoV-2","TCCAAAGGCCATACCA",3,25.75,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L5M L60R G83W C150L",4
"lib1","SARS-CoV-2","TCCAAAGGCCTAACGC",4,102.81,10.5,-0.27,0.06,2.84,1.09,0,">1 nonsynonymous","I2L A18F",2
"lib1","SARS-CoV-2","TCCAAAGTGTATTTAC",5,53.73,10.26,-0.5,0.05,2.79,1,0,"1 nonsynonymous","S45V",1
"lib1","SARS-CoV-2","TCCAAATACCAGCAAA",7,117.81,9.55,-1.21,0.12,1.98,1.17,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TCCAAATCCACTACTA",9,84.19,9.96,-0.81,0.05,2.84,1.05,0,">1 nonsynonymous","F44I G174T",2
"lib1","SARS-CoV-2","TCCAAATCCGCAATTT",2,22.73,6,-4.76,1.82,3,1.21,0.01,">1 nonsynonymous","F12R C49S V77G A81L R127D",5
"lib1","SARS-CoV-2","TCCAAATCCGTCAATT",1,2.09,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TCCAAATCGACATGGC",2,25.62,9.9,-0.86,0.14,2.53,1.03,0.01,">1 nonsynonymous","R127A G146S",2
"lib1","SARS-CoV-2","TCCAAATCGAGACGTT",9,3.41,NA,NA,NA,NA,NA,NA,"stop","T3S L57F D97* N120S",4
"lib1","SARS-CoV-2","TCCAAATGAGTGCCAA",4,0,NA,NA,NA,NA,NA,NA,"stop","W106* L122S V153L",3
"lib1","SARS-CoV-2","TCCAAATTTGAGTATT",2,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99I P149S F167A",3
"lib1","SARS-CoV-2","TCCAAATTTTCATTGA",1,28.3,9.13,-1.64,0.18,1.59,1.13,0.01,">1 nonsynonymous","A89Y E154G",2
"lib1","SARS-CoV-2","TCCAACAAAAACCATT",6,161.85,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A14K C31L P177F",3
"lib1","SARS-CoV-2","TCCAACAAAGTATAAT",7,65.24,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16F L122P T148R L162C V173R",5
"lib1","SARS-CoV-2","TCCAACAACCTAGAAG",7,35.88,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A33N C49R",2
"lib1","SARS-CoV-2","TCCAACAAGGGCATCC",3,26.14,9.49,-1.27,0.3,1.7,1.19,0.04,">1 nonsynonymous","I28R D90N",2
"lib1","SARS-CoV-2","TCCAACACATTCATCC",2,54.23,7.78,-2.99,0.22,1.5,1.13,0.01,">1 nonsynonymous","F12G R27S D90E",3
"lib1","SARS-CoV-2","TCCAACAGTTGAACAA",5,48.86,10.37,-0.4,0.08,2.8,1.09,0,">1 nonsynonymous","T46H T55L D90T",3
"lib1","SARS-CoV-2","TCCAACATAGACAAAC",3,21.94,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","L5R S36T Y93V K128V",4
"lib1","SARS-CoV-2","TCCAACATAGCTTGTG",1,38.8,10.77,0,0.11,2.82,1.14,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCAACCAACCCCAAT",2,31.73,8.01,-2.75,0.13,2.09,1.13,0.01,">1 nonsynonymous","R73M F134Q G146T",3
"lib1","SARS-CoV-2","TCCAACCATAACAACA",1,33.58,9.37,-1.39,0.08,2.58,1.17,0,">1 nonsynonymous","I28W Y39M N107T K198Q",4
"lib1","SARS-CoV-2","TCCAACCATCGACTAA",6,69.67,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25G V77L A89R L125F",4
"lib1","SARS-CoV-2","TCCAACCCAAAACGTT",4,38.94,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20S K94Y Q144K",3
"lib1","SARS-CoV-2","TCCAACCCGCGCTGTT",3,45.28,10.27,-0.5,0.07,2.46,1,0,">1 nonsynonymous","R27K W106L",2
"lib1","SARS-CoV-2","TCCAACCCGTATATTG",12,169.47,10.33,-0.44,0.05,2.91,1.02,0,">1 nonsynonymous","N64H G152V",2
"lib1","SARS-CoV-2","TCCAACCGCTCCAGAT",3,61.85,10.63,-0.14,0.07,2.83,1.12,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","TCCAACCTAACCAAGG",7,112.34,10.59,-0.17,0.03,2.92,1.03,0,">1 nonsynonymous","V115Y L122W",2
"lib1","SARS-CoV-2","TCCAACCTGTCGAATG",5,63.44,10.15,-0.61,0.1,2.47,1.02,0,">1 nonsynonymous","A14V D97G",2
"lib1","SARS-CoV-2","TCCAACCTTTAATCAT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","C6M W23K G86* Y91C G116R F167R",6
"lib1","SARS-CoV-2","TCCAACGAACAAAACA",1,290.88,10.71,-0.05,0.04,2.95,1.01,0,">1 nonsynonymous","N130Y L188R",2
"lib1","SARS-CoV-2","TCCAACGAATACAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","R27T S45P L60V Y66* Y91T N130W S139C P149D K198V",9
"lib1","SARS-CoV-2","TCCAACGCAAGCAAAG",8,77.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48E L95G N107L",3
"lib1","SARS-CoV-2","TCCAACGCCCAAATAG",1,31.75,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","Y93V",1
"lib1","SARS-CoV-2","TCCAACGCGAACCTCA",4,40.69,10.91,0.15,0.09,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAACGCTCCCCACA",2,9.45,6,-4.76,2,3,1.03,0,">1 nonsynonymous","I2S Y93F R136V P149K R179F",5
"lib1","SARS-CoV-2","TCCAACGGCCTTCGGG",5,53.44,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","A67N",1
"lib1","SARS-CoV-2","TCCAACGGCGGTCGAC",5,80.8,10.8,0.03,0.07,2.96,1.02,0,"1 nonsynonymous","G196E",1
"lib1","SARS-CoV-2","TCCAACGTAAACCTAT",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M I104Q A145T",3
"lib1","SARS-CoV-2","TCCAACTAACAATAAC",5,2.31,NA,NA,NA,NA,NA,NA,"stop","Y93* Y123Q",2
"lib1","SARS-CoV-2","TCCAACTATAGTGTAA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","E141* Q163M K199F",3
"lib1","SARS-CoV-2","TCCAACTATGCTAGAA",3,18.89,6,-4.76,2,3,1.04,0,">1 nonsynonymous","K94G N157P",2
"lib1","SARS-CoV-2","TCCAACTCTAAAGGAA",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H S29L A105G Q168I",4
"lib1","SARS-CoV-2","TCCAACTGTAAGGCCA",7,2.24,NA,NA,NA,NA,NA,NA,"stop","K94* Y119D",2
"lib1","SARS-CoV-2","TCCAAGAAACAAAGTT",4,62.17,10.73,-0.04,0.05,2.88,1.06,0,">1 nonsynonymous","F160C S200C",2
"lib1","SARS-CoV-2","TCCAAGAAGCAAGACA",13,91.17,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","E10L Y35A G74R I88R R136P",5
"lib1","SARS-CoV-2","TCCAAGAATAGCCTGA",2,47.16,9.11,-1.66,0.15,1.7,1.08,0.01,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","TCCAAGAATTACACCA",2,45.82,10.78,0.02,0.08,2.9,1.07,0,">1 nonsynonymous","L5S T201V",2
"lib1","SARS-CoV-2","TCCAAGACCTAGGAAA",2,5.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S N40K A81F A145M",4
"lib1","SARS-CoV-2","TCCAAGAGCGAACCCG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T15I S29T Y66G P82E N120*",5
"lib1","SARS-CoV-2","TCCAAGAGTAGTCACA",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K L57T Y143R",3
"lib1","SARS-CoV-2","TCCAAGATACCCATGG",1,10.64,6.57,-4.2,0.45,1.5,1.04,0.02,">1 nonsynonymous","V11E R25T F62A D98S G116Y G196E",6
"lib1","SARS-CoV-2","TCCAAGCAAATTTACA",3,6.34,10.69,-0.07,0.07,2.93,1.09,0,"1 nonsynonymous","L60V",1
"lib1","SARS-CoV-2","TCCAAGCCTTGTCTAT",2,16.34,8.57,-2.19,0.24,2.25,1.12,0.02,">1 nonsynonymous","K87S L122S G146V",3
"lib1","SARS-CoV-2","TCCAAGCGACGTAGCG",8,40.35,6.68,-4.08,0.21,1.5,1.05,0.01,">1 nonsynonymous","T3K Y35G F167N",3
"lib1","SARS-CoV-2","TCCAAGCGGGAAGTTA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","N13A G86E P96H A105T N107V N118V Y123* E186N",8
"lib1","SARS-CoV-2","TCCAAGCGTGAGAAGC",4,1.94,NA,NA,NA,NA,NA,NA,"stop","Y35S S43I C49* R73C K87P",5
"lib1","SARS-CoV-2","TCCAAGGAACTATCAG",9,124.52,8.59,-2.17,0.14,2.93,1.05,0.01,"1 nonsynonymous","G166D",1
"lib1","SARS-CoV-2","TCCAAGGATGCAATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R Y35M K94*",3
"lib1","SARS-CoV-2","TCCAAGGCTTCACTTC",3,7.75,6.57,-4.19,0.33,3,1.22,0.01,">1 nonsynonymous","C49S V173Y T201Q",3
"lib1","SARS-CoV-2","TCCAAGGGGGCGCTAT",9,1.01,NA,NA,NA,NA,NA,NA,"stop","S19V N58* Y91V L183H",4
"lib1","SARS-CoV-2","TCCAAGGTTCACGCCA",3,20.78,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","S19I K87F W106K",3
"lib1","SARS-CoV-2","TCCAAGTAGGGCCTGT",3,30.28,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","L131R",1
"lib1","SARS-CoV-2","TCCAAGTCCTCGCTTC",4,2.52,NA,NA,NA,NA,NA,NA,"stop","A22V D90*",2
"lib1","SARS-CoV-2","TCCAAGTCTGCAAACC",5,68.1,10.57,-0.2,0.09,2.87,1.08,0.01,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TCCAATAAAAAACAAG",12,141.49,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16F L57Y I80L C150A Y175T T201L",6
"lib1","SARS-CoV-2","TCCAATAAAGATATAA",2,35.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14R R25S D68E G83E P149H Q168I",6
"lib1","SARS-CoV-2","TCCAATAAAGCAAGTT",4,71.49,8.73,-2.03,0.18,1.5,1.15,0.01,">1 nonsynonymous","R16M Y165R",2
"lib1","SARS-CoV-2","TCCAATAAGAATGACC",1,10.56,9.36,-1.4,0.19,2.56,1,0.01,">1 nonsynonymous","L5E S36L T46M T85H N107D",5
"lib1","SARS-CoV-2","TCCAATAATATTATGG",2,69.66,9.03,-1.74,0.1,1.87,1.08,0,">1 nonsynonymous","I2K S129V S139L G152M N171S",5
"lib1","SARS-CoV-2","TCCAATACAAGCCTGT",5,237.03,9.07,-1.69,0.09,2.26,1.14,0,">1 nonsynonymous","S53M Q176L",2
"lib1","SARS-CoV-2","TCCAATACAATAAAAA",2,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M V77G G146D",3
"lib1","SARS-CoV-2","TCCAATACCGAAAAGT",4,42.37,6.01,-4.75,0.55,1.5,1.13,0.01,">1 nonsynonymous","T3R S19A I72K Q168K H189D",5
"lib1","SARS-CoV-2","TCCAATACCTCGTAGT",1,0.86,NA,NA,NA,NA,NA,NA,"stop","R16L D59* V115S P149L",4
"lib1","SARS-CoV-2","TCCAATATAACTAGCA",4,49.75,10.7,-0.07,0.08,2.89,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAATATACTTACGA",2,0.54,NA,NA,NA,NA,NA,NA,"stop","T15A G116C Y175*",3
"lib1","SARS-CoV-2","TCCAATATGCTAACCG",2,1.98,NA,NA,NA,NA,NA,NA,"stop","F47S D59P A105* D137P",4
"lib1","SARS-CoV-2","TCCAATCAAACGCCTT",1,30.07,10.16,-0.61,0.11,2.82,1,0,">1 nonsynonymous","K87I T100N I104C",3
"lib1","SARS-CoV-2","TCCAATCATGAACCAT",2,92.24,10.69,-0.07,0.06,2.95,1.01,0,">1 nonsynonymous","A33S S129T",2
"lib1","SARS-CoV-2","TCCAATCCGAATCCCA",2,71.81,10.81,0.05,0.09,2.98,1.01,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","TCCAATCCGTAACGCA",2,58.13,10.35,-0.42,0.02,2.92,1.03,0,">1 nonsynonymous","L5R Y175F F185L",3
"lib1","SARS-CoV-2","TCCAATCCTTGCTCAA",1,34.41,10.78,0.01,0.08,2.93,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCCAATCTATACTATT",3,27.19,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","Y35T K56P S69F N157S",4
"lib1","SARS-CoV-2","TCCAATCTATGCAATT",3,64.95,10.64,-0.12,0.08,2.84,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAATGAATCCATGC",4,14.34,7,-3.77,0.42,1.5,1.05,0.04,">1 nonsynonymous","S41T P96T G117R",3
"lib1","SARS-CoV-2","TCCAATGAGTTATCAC",2,7.66,10.77,0.01,0.13,2.91,1,0.01,">1 nonsynonymous","K26C C31T",2
"lib1","SARS-CoV-2","TCCAATGCCTTTGGAA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D P191D",2
"lib1","SARS-CoV-2","TCCAATGGAACTTCAA",3,52.45,8.97,-1.8,0.13,1.64,1.1,0.01,">1 nonsynonymous","F8G W106V F134Y",3
"lib1","SARS-CoV-2","TCCAATGTTTTTAAGC",5,67.72,10.78,0.01,0.06,2.92,1.07,0,">1 nonsynonymous","S36E S129K",2
"lib1","SARS-CoV-2","TCCAATTAAATTTACA",2,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P A42P S139M G174V",4
"lib1","SARS-CoV-2","TCCAATTAGTTCTTAT",6,118.8,10.66,-0.11,0.04,2.89,1.06,0,"1 nonsynonymous","F12I",1
"lib1","SARS-CoV-2","TCCAATTCAAAGTAGA",1,130.01,8.86,-1.9,0.09,2.21,1.13,0,">1 nonsynonymous","L5V Q176R K198P",3
"lib1","SARS-CoV-2","TCCAATTCATAAGTAG",13,151.02,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R27L A81E S129Y G152V Y159L",5
"lib1","SARS-CoV-2","TCCAATTCGAGAAACA",1,34.46,10.64,-0.12,0.07,2.97,1,0,">1 nonsynonymous","S45E N58S",2
"lib1","SARS-CoV-2","TCCAATTGACTCATCA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35D N40K T46* Y175R Y178H",5
"lib1","SARS-CoV-2","TCCAATTGAGACACCT",6,23.14,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","N92G G155A Q168L",3
"lib1","SARS-CoV-2","TCCAATTTATCTTAGC",5,14.84,8.35,-2.42,0.42,1.5,1.1,0.04,">1 nonsynonymous","P96L P149S",2
"lib1","SARS-CoV-2","TCCACAAAATATGTAT",2,44.32,10.32,-0.44,0.06,2.81,1.06,0,">1 nonsynonymous","N4C S184A",2
"lib1","SARS-CoV-2","TCCACAAACTGTATAG",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E L183N",2
"lib1","SARS-CoV-2","TCCACAAATATGAATA",7,64.08,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","L5F A18G Y35S K132I G146R Q168A",6
"lib1","SARS-CoV-2","TCCACAAATCGATGTA",3,23.89,10.07,-0.7,0.08,2.79,1.02,0,">1 nonsynonymous","S41P L122A N151L E186H",4
"lib1","SARS-CoV-2","TCCACAAATCTTTTGC",3,26.4,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G83H G116S E135V C158T",4
"lib1","SARS-CoV-2","TCCACAACAACCAAAC",1,17.85,7.93,-2.84,0.25,1.65,1.17,0.03,">1 nonsynonymous","I2L Y91S E141C",3
"lib1","SARS-CoV-2","TCCACAACACCAAAAG",5,41.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P96N P133F F167L",3
"lib1","SARS-CoV-2","TCCACAACCCTATACC",4,31.41,10.14,-0.62,0.1,2.51,1.03,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TCCACAACCTCCCAGT",6,74.05,9.91,-0.86,0.11,2.14,1.02,0,">1 nonsynonymous","G83K F99M G152N",3
"lib1","SARS-CoV-2","TCCACAACTCCGTTTA",3,84.07,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16L Y35R N107H A145F",4
"lib1","SARS-CoV-2","TCCACAAGACAAGACG",2,17.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82C P133T Y175T",3
"lib1","SARS-CoV-2","TCCACAAGGACCCTTA",4,53.7,9.72,-1.05,0.12,2.56,1.04,0.01,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","TCCACAAGGAGAGAAT",2,17.73,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","V32R G83D N120T S129A V181L",5
"lib1","SARS-CoV-2","TCCACAATAACGTGAG",13,4.23,NA,NA,NA,NA,NA,NA,"stop","K48F V65R D98K Y119H L122D P169*",6
"lib1","SARS-CoV-2","TCCACAATATAACAAG",5,74.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P82G F126S",2
"lib1","SARS-CoV-2","TCCACAATTTACCATG",8,68.65,9.95,-0.81,0.06,2.66,1.05,0,">1 nonsynonymous","G9K K56P",2
"lib1","SARS-CoV-2","TCCACACAATGAGTGA",4,0.5,NA,NA,NA,NA,NA,NA,"stop","T3P Y178*",2
"lib1","SARS-CoV-2","TCCACACAGAAAAATA",6,94.11,10.66,-0.11,0.06,2.86,1.07,0,"1 nonsynonymous","S129A",1
"lib1","SARS-CoV-2","TCCACACCCTCAAAAA",3,18.49,6.47,-4.3,0.71,1.5,1.19,0.03,">1 nonsynonymous","C49I N107C",2
"lib1","SARS-CoV-2","TCCACACCTGTAACGA",1,32.17,10.85,0.08,0.03,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCACACGCGTAGTAC",1,6.1,7.28,-3.49,0.52,1.5,1,0.06,">1 nonsynonymous","N58F S108K L188N",3
"lib1","SARS-CoV-2","TCCACACGTACCAGCC",1,27.4,10.39,-0.38,0.12,2.88,1,0.01,">1 nonsynonymous","T3C L38F",2
"lib1","SARS-CoV-2","TCCACACTAAACATTT",2,12.18,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K26E F99H Q163S R179G P191F",5
"lib1","SARS-CoV-2","TCCACACTACCGTAAC",2,14.13,10.4,-0.36,0.06,3,1.01,0,">1 nonsynonymous","V37S C61W D98H",3
"lib1","SARS-CoV-2","TCCACACTTATGTCAT",3,4.9,NA,NA,NA,NA,NA,NA,"stop","D68* I88T",2
"lib1","SARS-CoV-2","TCCACAGACCCAAGAA",17,134.92,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S43R T55I Y91K C150M",4
"lib1","SARS-CoV-2","TCCACAGAGGGCCAAC",6,26.08,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","R27S S45R K94S R136F N157D",5
"lib1","SARS-CoV-2","TCCACAGATTATAACC",3,45.84,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R73G G83T K114E Y119T S129G",5
"lib1","SARS-CoV-2","TCCACAGCAGTAAAAG",2,35.5,10.63,-0.13,0.08,2.91,1.05,0,">1 nonsynonymous","E141V F160Y",2
"lib1","SARS-CoV-2","TCCACAGTAAAAGAGT",1,38.35,6.56,-4.21,0.78,1.5,1.11,0.07,">1 nonsynonymous","K26T A42T Y50A C150A Y178K",5
"lib1","SARS-CoV-2","TCCACAGTTGGCAATT",3,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R F126T",2
"lib1","SARS-CoV-2","TCCACAGTTGGTCTAG",2,9.16,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","E76A G86D E141K",3
"lib1","SARS-CoV-2","TCCACATAGATATTAA",3,44.13,10.74,-0.03,0.07,2.91,1.05,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","TCCACATATTAAACAC",4,59.79,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6Y G74A Y91V S113K",4
"lib1","SARS-CoV-2","TCCACATGCTCATACT",7,208.52,6,-4.76,1.92,1.5,1.13,0.01,">1 nonsynonymous","L60P V71W G83Y I142V Y178K",5
"lib1","SARS-CoV-2","TCCACCAAAGGTTGAA",3,10.06,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","K56W P96L Y119V C150N E154A",5
"lib1","SARS-CoV-2","TCCACCAACTATACGC",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15N",1
"lib1","SARS-CoV-2","TCCACCACATATGATT",3,26.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112F N118L",2
"lib1","SARS-CoV-2","TCCACCACCAAGATGC",4,21.64,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R27T S29M N40T F47R D97L G146W F156S",7
"lib1","SARS-CoV-2","TCCACCACCGAGAGGT",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D P96D T170V",3
"lib1","SARS-CoV-2","TCCACCACCGCCGGTT",4,28.39,10.76,0,0.08,2.94,1,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","TCCACCACGTATCAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S41Y V71* L162Y",3
"lib1","SARS-CoV-2","TCCACCACTAACGTCA",1,11.56,6,-4.76,2,2.04,1.2,0.02,">1 nonsynonymous","V37Y G86V",2
"lib1","SARS-CoV-2","TCCACCACTCTTTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V A105R S113Q Y121V S139R",5
"lib1","SARS-CoV-2","TCCACCAGTCCACCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* F12Y L125P E141N",4
"lib1","SARS-CoV-2","TCCACCATCAGAATGA",1,9.7,6,-4.76,1.67,1.5,1.09,0.04,">1 nonsynonymous","Y91H D97L F167A",3
"lib1","SARS-CoV-2","TCCACCATCAGCACAC",11,3.08,NA,NA,NA,NA,NA,NA,"stop","S45* V65G L122*",3
"lib1","SARS-CoV-2","TCCACCATTTGTTAAA",7,29.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99C V103L",2
"lib1","SARS-CoV-2","TCCACCCATAAGTTCC",2,37.1,9.31,-1.46,0.12,2.08,1.1,0.01,">1 nonsynonymous","F12W Q84V F156W",3
"lib1","SARS-CoV-2","TCCACCCCGAGATTCG",3,22.95,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y35L S53P V77Y Q79H Y91I D97G L188P",7
"lib1","SARS-CoV-2","TCCACCCGTAGTGAAC",6,45.75,6,-4.76,1.37,3,1.16,0,">1 nonsynonymous","G86V N118V",2
"lib1","SARS-CoV-2","TCCACCCTCGTCAAAT",8,97.36,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A22R L60W Q84N L122R N157K",5
"lib1","SARS-CoV-2","TCCACCCTTTTCTGCA",3,108.29,10.8,0.03,0.06,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCACCGAATCACTCA",3,53.35,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y66A R127F R179E",3
"lib1","SARS-CoV-2","TCCACCGGATGTCGCT",1,94.6,9.57,-1.2,0.06,2.82,1.07,0,">1 nonsynonymous","V37L Y121P",2
"lib1","SARS-CoV-2","TCCACCGTAGGATAAT",4,71.81,10.59,-0.17,0.05,2.88,1.07,0,"1 nonsynonymous","T3F",1
"lib1","SARS-CoV-2","TCCACCGTTAATCGAT",1,9.66,10.77,0,0.09,2.97,1,0.01,">1 nonsynonymous","K128L V153Q",2
"lib1","SARS-CoV-2","TCCACCTACGTTTATA",3,77.29,10.81,0.04,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCACCTAGGTCGTCA",2,20.07,9.06,-1.7,0.17,1.85,1.11,0.01,">1 nonsynonymous","L38R F47V",2
"lib1","SARS-CoV-2","TCCACCTATAGCTGTA",4,0.84,NA,NA,NA,NA,NA,NA,"stop","F70* T100R F167I",3
"lib1","SARS-CoV-2","TCCACCTGTCAAGTCA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","S36* S41F K114V Y123L E141V G146W G152N",7
"lib1","SARS-CoV-2","TCCACGAAGAATTAAC",7,1.32,NA,NA,NA,NA,NA,NA,"stop","S19P C49F K56A I104N I142N P169*",6
"lib1","SARS-CoV-2","TCCACGAATGGAGCCA",5,25.28,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90P A190T",2
"lib1","SARS-CoV-2","TCCACGACTCATATGG",1,50.13,8.62,-2.14,0.11,2.87,1.1,0.01,"1 nonsynonymous","S113N",1
"lib1","SARS-CoV-2","TCCACGAGCACTAATC",3,102.34,10.79,0.02,0.05,2.95,1.03,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","TCCACGATACAGGTAC",2,22.52,6,-4.76,2,3,1.06,0,">1 nonsynonymous","C6W F17W V52S A89Y N107M",5
"lib1","SARS-CoV-2","TCCACGATCAAAAAGC",5,117.36,8.37,-2.39,0.15,2.25,1.12,0.01,">1 nonsynonymous","D59K A105G G166H",3
"lib1","SARS-CoV-2","TCCACGATTAAATTCA",2,29.87,9.89,-0.87,0.16,1.79,1.14,0.01,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TCCACGCCAAGCGGAG",1,121.36,10.71,-0.05,0.06,2.92,1.03,0,">1 nonsynonymous","S43L P149S",2
"lib1","SARS-CoV-2","TCCACGGTGGGTATTG",6,31.88,10.65,-0.11,0.04,2.94,1.03,0,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","TCCACGGTTTTTTAAC",3,48.75,10.55,-0.22,0.06,2.87,1.04,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TCCACGTACCTATTAA",2,57.83,10.2,-0.56,0.05,2.76,1.05,0,"1 nonsynonymous","D34R",1
"lib1","SARS-CoV-2","TCCACGTATCATACGG",4,67.86,9.89,-0.88,0.11,2.33,1.07,0.01,">1 nonsynonymous","Y35E G152A",2
"lib1","SARS-CoV-2","TCCACGTGTTAAGACA",3,26.03,6.01,-4.75,0.89,1.55,1.28,0.02,">1 nonsynonymous","L122M G146M P177Q",3
"lib1","SARS-CoV-2","TCCACTAAGCCCAACA",2,46.94,9.25,-1.52,0.21,1.69,1.18,0.02,">1 nonsynonymous","D75Y F185T T201Q",3
"lib1","SARS-CoV-2","TCCACTAAGTACGATG",4,81.4,9.72,-1.04,0.06,2.81,1.05,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","TCCACTAATCTAGCAG",1,45.82,10.87,0.11,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCACTACCAGCTGAG",1,42.67,7.79,-2.98,0.42,1.5,1.09,0.05,">1 nonsynonymous","F12Q S139C",2
"lib1","SARS-CoV-2","TCCACTAGACTACCGG",4,14.63,10.09,-0.68,0.1,2.65,1.06,0,">1 nonsynonymous","E135R T148I",2
"lib1","SARS-CoV-2","TCCACTCAAGCCAGGC",5,37.39,6,-4.76,1.85,1.5,1.15,0.01,">1 nonsynonymous","S69M N118V F160L V181T",4
"lib1","SARS-CoV-2","TCCACTCATAATGAAT",1,1.37,NA,NA,NA,NA,NA,NA,"stop","P7H V37L C49*",3
"lib1","SARS-CoV-2","TCCACTCCTAGCTCCT",4,77.82,8.4,-2.36,0.18,2,1.14,0.01,">1 nonsynonymous","K56L G146I",2
"lib1","SARS-CoV-2","TCCACTCTAACTCAAA",5,84.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10R K48M R127L",3
"lib1","SARS-CoV-2","TCCACTGCCAACATTG",5,69.66,9.77,-0.99,0.11,1.91,1.13,0,">1 nonsynonymous","F12S Y119S N171F",3
"lib1","SARS-CoV-2","TCCACTGGAACACATA",3,28.99,7.35,-3.42,0.5,1.5,1.12,0.08,">1 nonsynonymous","E10I P82N P149T",3
"lib1","SARS-CoV-2","TCCACTGGTCAATCTT",2,2.02,NA,NA,NA,NA,NA,NA,"stop","T63* V103T G117R",3
"lib1","SARS-CoV-2","TCCACTGTGACGCAAA",3,79.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A N40L T46M",3
"lib1","SARS-CoV-2","TCCACTGTGTCAACTT",2,30.21,10.7,-0.07,0.06,2.9,1.05,0,"1 nonsynonymous","I138K",1
"lib1","SARS-CoV-2","TCCACTTAGTTTGACA",13,69.64,6,-4.76,1.3,1.5,1.24,0.02,">1 nonsynonymous","Y50N Q168L",2
"lib1","SARS-CoV-2","TCCACTTATCGTTAAA",4,55.76,10.77,0,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCACTTATTCCGTTG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","Y39* S45L V71K N107A F156P",5
"lib1","SARS-CoV-2","TCCACTTGTGCAAGTG",1,2.17,NA,NA,NA,NA,NA,NA,"stop","Y39* P82L",2
"lib1","SARS-CoV-2","TCCACTTTAAACGATA",1,12.25,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14N F47N D97F G146M S200L",5
"lib1","SARS-CoV-2","TCCACTTTGAATGAAC",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G Y35F F44I A105V G155F",5
"lib1","SARS-CoV-2","TCCAGAAACCATCTAC",1,20.95,6,-4.76,2,1.5,1.38,0.07,">1 nonsynonymous","I88E G152W",2
"lib1","SARS-CoV-2","TCCAGAAACTACTTGA",5,4.62,NA,NA,NA,NA,NA,NA,"stop","E10N T100C Y175*",3
"lib1","SARS-CoV-2","TCCAGAAATCCCCTTA",5,62.71,6,-4.76,2,3,1.18,0,">1 nonsynonymous","L38C D90V L122E Y178G",4
"lib1","SARS-CoV-2","TCCAGAAATTATGACT",2,1519.2,10.02,-0.75,0.07,2.57,1.01,0,">1 nonsynonymous","G51D C61V",2
"lib1","SARS-CoV-2","TCCAGAACAGAGAATC",8,27.52,6,-4.76,1.34,1.5,1.12,0.02,">1 nonsynonymous","S41V P96F",2
"lib1","SARS-CoV-2","TCCAGAACGAGATTCA",3,74.13,10.64,-0.12,0.04,2.94,1,0,">1 nonsynonymous","T15Q T201K",2
"lib1","SARS-CoV-2","TCCAGAACGTACAATT",3,72.76,10.31,-0.46,0.06,2.86,1.04,0,">1 nonsynonymous","E10S S41R",2
"lib1","SARS-CoV-2","TCCAGAAGTATTAACT",8,101.48,9.09,-1.67,0.1,2.31,1.11,0.01,">1 nonsynonymous","D112L V173M",2
"lib1","SARS-CoV-2","TCCAGAATAAATCCCT",12,247.46,10.5,-0.26,0.03,2.93,1.03,0,">1 nonsynonymous","N64E Q144H",2
"lib1","SARS-CoV-2","TCCAGAATGGAAAACT",7,48.49,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T46M T55C G86A L131V G155T",5
"lib1","SARS-CoV-2","TCCAGAATGTTACAGG",4,35.71,9.5,-1.26,0.12,1.9,1.18,0.01,">1 nonsynonymous","D90L N107S",2
"lib1","SARS-CoV-2","TCCAGACAAAATATGA",7,58.65,10.57,-0.19,0.05,2.91,1.02,0,"1 nonsynonymous","A33S",1
"lib1","SARS-CoV-2","TCCAGACATTTCTGTG",3,2.56,NA,NA,NA,NA,NA,NA,"stop","K94* V103F I138M V173P Y178F",5
"lib1","SARS-CoV-2","TCCAGACATTTGTAGA",5,41.75,10.76,0,0.04,2.97,1.01,0,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","TCCAGACCACAGAAAT",2,23.42,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C31K D112Y",2
"lib1","SARS-CoV-2","TCCAGACCCTACCTCT",10,92.28,9.61,-1.16,0.04,2.85,1.1,0,"1 nonsynonymous","Y119H",1
"lib1","SARS-CoV-2","TCCAGATCCAACATAA",2,57.98,9.62,-1.14,0.22,1.5,1.05,0.02,">1 nonsynonymous","S19V N171V",2
"lib1","SARS-CoV-2","TCCAGATCCTATGATT",1,33.74,10.05,-0.72,0.05,2.88,1.02,0,">1 nonsynonymous","N118V F160Y",2
"lib1","SARS-CoV-2","TCCAGATTGCATTACA",2,28.94,6.66,-4.11,0.34,1.5,1.11,0.01,">1 nonsynonymous","L5N K48R K56G C61T N92G W106T N120F R127L R136T",9
"lib1","SARS-CoV-2","TCCAGATTGGTCTCCA",4,91.39,10.86,0.1,0.07,2.94,1.02,0,">1 nonsynonymous","S147P V173F",2
"lib1","SARS-CoV-2","TCCAGCAAACTGTAGT",2,22.04,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T3L T15D S41P G83C I138G G146R C150L N157I",8
"lib1","SARS-CoV-2","TCCAGCAACTTCCGAG",5,119.04,8.62,-2.14,0.1,2.41,1.16,0,">1 nonsynonymous","T3P L125A N151H F160L V173S",5
"lib1","SARS-CoV-2","TCCAGCAAGAACTAAA",4,33.23,9.15,-1.62,0.24,1.5,1.17,0.02,">1 nonsynonymous","A33T L122N R136S P149A",4
"lib1","SARS-CoV-2","TCCAGCAATGGTCTAT",2,8.39,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N92L F99L G155W T201Q",4
"lib1","SARS-CoV-2","TCCAGCAATTTAGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8L D68* Y178H",3
"lib1","SARS-CoV-2","TCCAGCACAACGACAG",7,60.22,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I2M D98C W106A I142P",4
"lib1","SARS-CoV-2","TCCAGCACAGGTACAC",3,0.63,NA,NA,NA,NA,NA,NA,"stop","C49* A81V K87S L122G V173Y",5
"lib1","SARS-CoV-2","TCCAGCAGTAAAATAT",14,2.61,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib1","SARS-CoV-2","TCCAGCATCTAGTTCC",4,20.43,9.62,-1.14,0.27,1.64,1.11,0.05,">1 nonsynonymous","L60P D98V N130S",3
"lib1","SARS-CoV-2","TCCAGCCACCCAACTA",8,84.25,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86C R124T",2
"lib1","SARS-CoV-2","TCCAGCCAGTACTTGT",1,51.44,10.81,0.04,0.07,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAGCCCGTGGATCC",4,46.12,9.9,-0.86,0.1,2.28,1.07,0,">1 nonsynonymous","E10G N58V S139N",3
"lib1","SARS-CoV-2","TCCAGCCTATACCAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W E135V",2
"lib1","SARS-CoV-2","TCCAGCGGACTGTACA",2,83.82,10.67,-0.09,0.05,2.93,1.04,0,"1 nonsynonymous","K128Q",1
"lib1","SARS-CoV-2","TCCAGCTGCTTACCTC",2,23.72,10.5,-0.27,0.09,2.89,1.05,0,">1 nonsynonymous","C61N N120W T201L",3
"lib1","SARS-CoV-2","TCCAGGAACACTCGCA",1,117.1,10.82,0.06,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCAGGAATTGTGTAA",1,7.13,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","C49H S113L Y143M K198P",4
"lib1","SARS-CoV-2","TCCAGGACAGCACACC",8,15.49,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","K26P S41V G86Y L122V",4
"lib1","SARS-CoV-2","TCCAGGACGAGTATGA",7,46.08,6,-4.76,1.2,1.5,1.19,0.01,">1 nonsynonymous","A22K F62K P96M",3
"lib1","SARS-CoV-2","TCCAGGACTACAACAA",4,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I N107T G155F Y165T",4
"lib1","SARS-CoV-2","TCCAGGATTTCCTCTT",14,266.95,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16P C150R",2
"lib1","SARS-CoV-2","TCCAGGCAAAAGTAAA",3,15.35,6.4,-4.37,0.76,1.5,1.14,0.05,">1 nonsynonymous","S19R I88D W106R C150N",4
"lib1","SARS-CoV-2","TCCAGGCAAAGATGAG",2,67.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9V C49R N58M N107F",4
"lib1","SARS-CoV-2","TCCAGGCAGGCAACAT",2,78.68,10.78,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TCCAGGCCAGCAGAAC",1,13.69,10.55,-0.22,0.06,2.82,1.1,0,">1 nonsynonymous","P54C N130K T201L",3
"lib1","SARS-CoV-2","TCCAGGCGGCTTATTA",4,2.17,NA,NA,NA,NA,NA,NA,"stop","V32T W106* P161T T170I",4
"lib1","SARS-CoV-2","TCCAGGGCTATCCAAG",3,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T A89L K94G V173P",4
"lib1","SARS-CoV-2","TCCAGGGGCTCGAGAT",1,9.07,6.3,-4.47,2,1.5,1.16,0.03,">1 nonsynonymous","P54I I88R D112F",3
"lib1","SARS-CoV-2","TCCAGGGTGTATCAAT",1,10.49,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6N F62P N107G P161C",4
"lib1","SARS-CoV-2","TCCAGGTTATGGTCGA",9,112.43,9.74,-1.03,0.1,2.44,1.08,0,">1 nonsynonymous","D59K N110K P161G",3
"lib1","SARS-CoV-2","TCCAGTACCTCAAGCA",6,24.54,10.2,-0.57,0.09,2.55,1.01,0,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","TCCAGTACGAATTCTC",7,51.56,9.81,-0.96,0.06,2.82,1.02,0,">1 nonsynonymous","A14Y T63S K87H",3
"lib1","SARS-CoV-2","TCCAGTAGACTCAAAC",3,0.92,NA,NA,NA,NA,NA,NA,"stop","A14V K56S F70R E141* N157Y",5
"lib1","SARS-CoV-2","TCCAGTATAGATAACT",3,63.95,9.73,-1.04,0.16,1.62,1.06,0.01,">1 nonsynonymous","Y91K Y123A P149T",3
"lib1","SARS-CoV-2","TCCAGTCAAGAATAAG",1,0.38,NA,NA,NA,NA,NA,NA,"stop","N4H G9L K48* K94*",4
"lib1","SARS-CoV-2","TCCAGTCCATGGATAT",7,83.79,7.03,-3.73,0.12,1.5,1.12,0,">1 nonsynonymous","S129Q C158K P191I",3
"lib1","SARS-CoV-2","TCCAGTCGAACCCCGC",1,54.47,9.71,-1.06,0.08,2.72,1.09,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","TCCAGTCTACAAACAG",4,21.66,10.57,-0.2,0.1,2.89,1.07,0,"1 nonsynonymous","K132G",1
"lib1","SARS-CoV-2","TCCAGTGAAAAAGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L K114L",2
"lib1","SARS-CoV-2","TCCAGTGAACGTAAAT",6,2.63,NA,NA,NA,NA,NA,NA,"stop","N24* S41K G101M N130M E141A L162M",6
"lib1","SARS-CoV-2","TCCAGTGTACTTCAAG",2,72.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E76F Q144L P177R",3
"lib1","SARS-CoV-2","TCCAGTTAAGTATTGG",2,21.99,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5R V37D L95A F167L S184P",5
"lib1","SARS-CoV-2","TCCAGTTGATGAAACA",3,56.13,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L57C I88T F99D Y121K Q144V P177V",6
"lib1","SARS-CoV-2","TCCAGTTTATAAGAGT",14,5.16,NA,NA,NA,NA,NA,NA,"stop","I88M W106* E135L",3
"lib1","SARS-CoV-2","TCCATAAAATAAAACT",5,119.85,10.72,-0.04,0.05,2.91,1.04,0,">1 nonsynonymous","F8L N64I",2
"lib1","SARS-CoV-2","TCCATAAACGAGAGAA",2,17.81,10.48,-0.28,0.06,3,1.03,0,">1 nonsynonymous","S41Q S129Y",2
"lib1","SARS-CoV-2","TCCATAAAGAATATGC",1,29.1,7.64,-3.12,0.18,1.81,1.17,0.02,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","TCCATAACAGAGAGTG",9,54.24,8.15,-2.62,0.24,1.5,1.21,0.02,">1 nonsynonymous","Y66M N107K P133S",3
"lib1","SARS-CoV-2","TCCATAACCCCAGGAG",2,41.95,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","W106R S129I F167P",3
"lib1","SARS-CoV-2","TCCATAACCGAGGGTA",5,58.14,9.69,-1.07,0.06,1.98,1.03,0,">1 nonsynonymous","K26V G86N",2
"lib1","SARS-CoV-2","TCCATAACCTACCATA",7,105.48,6,-4.76,2,1.53,1.15,0.01,">1 nonsynonymous","K87S R124V",2
"lib1","SARS-CoV-2","TCCATAACGAAAAAAG",6,8.64,6.43,-4.34,0.55,2.11,1.08,0.05,">1 nonsynonymous","T15A S41Y V65F D90S C158V F167P",6
"lib1","SARS-CoV-2","TCCATAACTGAATAAA",2,29.74,10.08,-0.69,0.05,2.59,1.04,0,"1 nonsynonymous","A81D",1
"lib1","SARS-CoV-2","TCCATAAGAAACAAGG",3,69.78,10.58,-0.18,0.06,2.89,1.07,0,"1 nonsynonymous","G83Q",1
"lib1","SARS-CoV-2","TCCATAAGGAACTGAA",7,158.91,10.77,0.01,0.07,2.87,1.06,0,">1 nonsynonymous","Q84S D97L",2
"lib1","SARS-CoV-2","TCCATAATCAAGGTGT",3,14.32,6,-4.76,2,1.5,1.04,0.02,">1 nonsynonymous","I80S N107R P161Q",3
"lib1","SARS-CoV-2","TCCATACAACCGGTTC",2,25,6,-4.76,2,1.5,1.2,0.02,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","TCCATACAATTGGGGA",6,26.95,10.85,0.09,0.07,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCATACAGAGGAATG",3,9.27,NA,NA,NA,NA,NA,NA,"stop","R16L A22* D97L E135R",4
"lib1","SARS-CoV-2","TCCATACCTAATGCCA",8,58.13,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P82K Y91F T100L W106A",4
"lib1","SARS-CoV-2","TCCATACGAGAAGGGA",5,0.36,NA,NA,NA,NA,NA,NA,"stop","D90* S113M N120A G152I N157I",5
"lib1","SARS-CoV-2","TCCATACGCTGAATTA",2,40.44,10.1,-0.66,0.07,2.71,1.03,0,">1 nonsynonymous","I2E S53P Y178Q",3
"lib1","SARS-CoV-2","TCCATACGGGGATAAG",3,0.82,NA,NA,NA,NA,NA,NA,"stop","D97* F126S",2
"lib1","SARS-CoV-2","TCCATACGTAGCCCAT",1,20.58,6,-4.76,1.49,1.5,1.08,0.01,">1 nonsynonymous","S19F V71M S129L I138K",4
"lib1","SARS-CoV-2","TCCATAGAAAAAAGTA",7,36.93,8.74,-2.02,0.11,1.87,1.13,0.01,">1 nonsynonymous","T3A F12T C61V G155K",4
"lib1","SARS-CoV-2","TCCATAGCCAGAGTGC",9,173.16,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A145T F167S",2
"lib1","SARS-CoV-2","TCCATAGCGAACACTG",2,21.7,8.87,-1.9,0.1,2.89,1.04,0.01,">1 nonsynonymous","S41G Y66T Q168M G174E",4
"lib1","SARS-CoV-2","TCCATAGGCCGACAGG",1,22.05,10.25,-0.52,0.07,2.88,1,0.01,"1 nonsynonymous","N118Y",1
"lib1","SARS-CoV-2","TCCATAGGTTATTCGC",7,96.76,10.73,-0.03,0.06,2.92,1.04,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","TCCATAGTAACCTAAT",4,63.91,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8V R179W",2
"lib1","SARS-CoV-2","TCCATAGTGACTTGAA",2,63.31,8.02,-2.74,0.14,2.2,1.13,0.01,">1 nonsynonymous","F17W C158R",2
"lib1","SARS-CoV-2","TCCATAGTGCAAGTTA",3,69.56,10.76,-0.01,0.07,2.86,1.1,0,"1 nonsynonymous","F160S",1
"lib1","SARS-CoV-2","TCCATAGTTATTTTAA",4,55.41,6,-4.76,1.55,1.5,1.2,0.02,">1 nonsynonymous","K26R A81D Y91N S129T V153L L162H",6
"lib1","SARS-CoV-2","TCCATATAATCGTATA",3,2.55,NA,NA,NA,NA,NA,NA,"stop","N1L V37S Y91* Y165E Q176L",5
"lib1","SARS-CoV-2","TCCATATATCGCGAGC",7,135.9,10.61,-0.16,0.04,2.93,1.04,0,">1 nonsynonymous","T100C K114C I142M",3
"lib1","SARS-CoV-2","TCCATATGGGCTGCCA",2,14.14,10.86,0.09,0.11,2.93,1.04,0,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","TCCATATTCAATCACC",3,15.11,9.16,-1.6,0.22,1.5,1.11,0.02,">1 nonsynonymous","I2K A14Y A22L",3
"lib1","SARS-CoV-2","TCCATCAACAAACGTA",1,37.11,10.72,-0.04,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCATCAACAAAGGAC",1,41.28,10.07,-0.69,0.06,2.96,1,0,">1 nonsynonymous","K87Y F156A",2
"lib1","SARS-CoV-2","TCCATCAACATAAAGA",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S C61L N107A",3
"lib1","SARS-CoV-2","TCCATCACTTATTGAT",4,112.44,9.57,-1.19,0.11,1.79,1.11,0,">1 nonsynonymous","L131N F160H",2
"lib1","SARS-CoV-2","TCCATCAGCTTGCGAG",2,38.68,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G74T I88C Y178A L183F",4
"lib1","SARS-CoV-2","TCCATCATAACATTGT",3,39.18,10.53,-0.24,0.09,2.97,1.05,0,"1 nonsynonymous","S41R",1
"lib1","SARS-CoV-2","TCCATCCAAAACAGCC",1,101.19,10.72,-0.04,0.06,2.92,1.04,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TCCATCCAAACGGCTG",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q L38T F62I V77H",4
"lib1","SARS-CoV-2","TCCATCCAACAACCTA",7,13.8,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","S19W V153G",2
"lib1","SARS-CoV-2","TCCATCCAAGATAAAG",1,24.33,10.84,0.08,0.07,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCATCCACCCACAGG",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E S113W S139L",3
"lib1","SARS-CoV-2","TCCATCCATCACTATT",5,51.86,6,-4.76,1.76,1.5,1.2,0.03,">1 nonsynonymous","V103I G117V F134V C158S",4
"lib1","SARS-CoV-2","TCCATCCCACTTCTGA",1,30.04,6.55,-4.21,0.54,1.5,1.14,0.03,">1 nonsynonymous","A33E C49D",2
"lib1","SARS-CoV-2","TCCATCCTAGGACAAA",2,2.32,NA,NA,NA,NA,NA,NA,"stop","Y35* N58M D90S D112* N120Y G146Q G155W N171S",8
"lib1","SARS-CoV-2","TCCATCCTCTAACCGT",1,17.16,7.77,-2.99,0.43,1.5,1.02,0.04,"1 nonsynonymous","V77G",1
"lib1","SARS-CoV-2","TCCATCCTGACCGTAG",1,22.09,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","A14T N24F S41P V52I D137S P149R",6
"lib1","SARS-CoV-2","TCCATCGCCCTTTGTT",1,6.07,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G9S A22V F62C G83E A89S",5
"lib1","SARS-CoV-2","TCCATCTACAAGGGCA",1,6.61,8.45,-2.31,0.25,2.28,1.03,0.03,">1 nonsynonymous","N1S S36I G117R",3
"lib1","SARS-CoV-2","TCCATCTACCTAACTT",2,9.9,10.73,-0.03,0.11,2.95,1,0.01,">1 nonsynonymous","N4K A89T T201N",3
"lib1","SARS-CoV-2","TCCATCTTTCAATTTG",1,24.06,10.87,0.1,0.1,2.81,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCATGAACAACCGTA",2,16.34,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","I80F A105L T148L T201D",4
"lib1","SARS-CoV-2","TCCATGAACTAGAATC",1,30.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G S113K V153W S164I G172K Q176E",6
"lib1","SARS-CoV-2","TCCATGACAAACAATA",3,39.74,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41T Y50N G117V",3
"lib1","SARS-CoV-2","TCCATGACAATCGCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R Y143L Y165M",3
"lib1","SARS-CoV-2","TCCATGACAGAACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2W Y39R G51S C61R K87* F99E P149F",7
"lib1","SARS-CoV-2","TCCATGAGATCCACAG",3,0.28,NA,NA,NA,NA,NA,NA,"stop","N64K T85Q Y159*",3
"lib1","SARS-CoV-2","TCCATGATAACTAAAT",7,184.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61G G172M",2
"lib1","SARS-CoV-2","TCCATGATATACCTAT",1,10.31,7.01,-3.76,0.68,1.5,1.1,0.07,">1 nonsynonymous","C31L V103C A145G",3
"lib1","SARS-CoV-2","TCCATGATATTGAATA",2,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R G146K",2
"lib1","SARS-CoV-2","TCCATGATCACCCTGT",1,18.92,10.64,-0.12,0.08,2.96,1.02,0,">1 nonsynonymous","G9W Y39S",2
"lib1","SARS-CoV-2","TCCATGATCTACGACT",6,102.28,10.63,-0.13,0.02,2.93,1.02,0,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","TCCATGCACGAGAGAA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","C61S V103* N120* R136S",4
"lib1","SARS-CoV-2","TCCATGTACATTACCG",5,67.84,10.33,-0.44,0.07,2.84,1.04,0,">1 nonsynonymous","Y91L P149L K198V",3
"lib1","SARS-CoV-2","TCCATGTATACGCCAC",1,52.17,10.36,-0.41,0.05,2.83,1.03,0,">1 nonsynonymous","T85P T140S",2
"lib1","SARS-CoV-2","TCCATGTCGTACCCAG",1,41.23,10.52,-0.25,0.07,2.92,1.06,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","TCCATGTTATAATCAA",2,11.74,6,-4.76,1.76,1.5,1.17,0.02,">1 nonsynonymous","G74R D90V D97G V103F",4
"lib1","SARS-CoV-2","TCCATTAAGCTTCGAA",6,46.33,8.22,-2.54,0.24,2.14,1.16,0.03,">1 nonsynonymous","W106K F126T",2
"lib1","SARS-CoV-2","TCCATTACGAAAGTAT",6,0.27,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib1","SARS-CoV-2","TCCATTACGATAGCCT",1,28.87,10.09,-0.67,0.09,2.21,1.07,0,">1 nonsynonymous","T46E D75M D97Y",3
"lib1","SARS-CoV-2","TCCATTAGATAGATCT",1,1.34,NA,NA,NA,NA,NA,NA,"stop","L5Y E141*",2
"lib1","SARS-CoV-2","TCCATTATGCTACATT",2,77.23,10.03,-0.73,0.07,2.89,1,0,">1 nonsynonymous","S36G K48L G174Q",3
"lib1","SARS-CoV-2","TCCATTATTCAGACAT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S147C P161Y",2
"lib1","SARS-CoV-2","TCCATTATTGAAACTA",6,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91R W106Q V173P L188F",4
"lib1","SARS-CoV-2","TCCATTATTTATAGGA",3,61.36,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G86L Y178S",2
"lib1","SARS-CoV-2","TCCATTCATAAATCGG",1,43.15,6.71,-4.06,0.42,1.5,1.12,0.02,">1 nonsynonymous","T55F P96I G116L P149D F160D P169Q",6
"lib1","SARS-CoV-2","TCCATTCATAATTAAT",3,51.75,9.51,-1.25,0.08,2.69,1.05,0,">1 nonsynonymous","I28T T55H N64T K87L R136K",5
"lib1","SARS-CoV-2","TCCATTCCACCATTGT",1,6.76,8.55,-2.22,0.34,1.5,1.01,0.04,">1 nonsynonymous","A42K A67V T100P",3
"lib1","SARS-CoV-2","TCCATTCGCCCATAAT",5,58,10.55,-0.21,0.05,2.95,1.01,0,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","TCCATTCTAGCACAAG",1,20.16,8.98,-1.79,0.15,2.11,1.04,0.02,">1 nonsynonymous","D59Y N107M",2
"lib1","SARS-CoV-2","TCCATTCTCCGCGATA",7,19.22,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","G101M E154G G166Y",3
"lib1","SARS-CoV-2","TCCATTGAATGTCCTG",1,24.69,10.76,-0.01,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCATTGACGGGAGCG",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N58R L95S G155P",4
"lib1","SARS-CoV-2","TCCATTGGATACGTAA",10,165.55,9.8,-0.96,0.08,2.19,1.04,0,">1 nonsynonymous","L38Q T201S",2
"lib1","SARS-CoV-2","TCCATTTACAGCTAAC",2,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T D112G",2
"lib1","SARS-CoV-2","TCCATTTCATACTGCG",6,274.98,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","T63N A81S D98R V103L D112K G117Y Y123R",7
"lib1","SARS-CoV-2","TCCATTTGAAGCAAAG",3,18.3,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L38S V52C Y93H C102P G116K",5
"lib1","SARS-CoV-2","TCCATTTTATTAATTC",5,78.75,10.54,-0.22,0.13,2.67,1.08,0.01,"1 nonsynonymous","G152S",1
"lib1","SARS-CoV-2","TCCATTTTTCTACGAG",21,356.77,10.38,-0.39,0.03,2.89,1.03,0,">1 nonsynonymous","T55R S69Y",2
"lib1","SARS-CoV-2","TCCCAAACAATTGAAT",4,33.52,10.71,-0.05,0.04,2.99,1,0,"1 nonsynonymous","T148E",1
"lib1","SARS-CoV-2","TCCCAAACACTCTAGG",8,5.8,NA,NA,NA,NA,NA,NA,"stop","A14* N110R G116V L162M R179Y S184K",6
"lib1","SARS-CoV-2","TCCCAAACCTCATACA",2,25.48,9.08,-1.69,0.21,1.65,1.2,0.02,">1 nonsynonymous","Q84L P96T",2
"lib1","SARS-CoV-2","TCCCAAACGCTCAAAG",4,86.2,10.34,-0.43,0.07,2.87,1.01,0,">1 nonsynonymous","G9Y N58F",2
"lib1","SARS-CoV-2","TCCCAAAGTAAATATT",12,169.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27F F167I",2
"lib1","SARS-CoV-2","TCCCAAAGTACCCGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","L122* F156L",2
"lib1","SARS-CoV-2","TCCCAAATCACCTAGT",4,48.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9L D90N D112S V153S",4
"lib1","SARS-CoV-2","TCCCAACAGATAACCA",4,63.86,10.2,-0.56,0.05,2.8,1.04,0,">1 nonsynonymous","R127S F160N",2
"lib1","SARS-CoV-2","TCCCAACCCCCTGAGG",3,34.02,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6V F12A I28Q A67S K114Q Y165T H189L",7
"lib1","SARS-CoV-2","TCCCAACCTACGAATG",5,12.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15I G51F C158P V173F",4
"lib1","SARS-CoV-2","TCCCAACTCCAGCATA",5,1.31,NA,NA,NA,NA,NA,NA,"stop","L5N V115*",2
"lib1","SARS-CoV-2","TCCCAACTGCTCAATC",2,63.31,10.67,-0.1,0.06,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCCAACTGTAACCGG",7,52.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53R N58M V181A",3
"lib1","SARS-CoV-2","TCCCAACTTTGTGCTA",1,22.8,8.37,-2.4,0.43,1.5,1,0.07,">1 nonsynonymous","T3S C61A D98R Y178K",4
"lib1","SARS-CoV-2","TCCCAAGACGCTTATC",2,56.79,10.01,-0.75,0.36,1.5,1,0.05,">1 nonsynonymous","C102L R124V",2
"lib1","SARS-CoV-2","TCCCAAGCAGCAGGCC",8,143.91,10.71,-0.06,0.07,2.89,1.08,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","TCCCAAGCGCATTATA",3,15.02,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C49I K87T N120L C158I S200Y",5
"lib1","SARS-CoV-2","TCCCAATAAAAACTTA",1,11,10.13,-0.64,0.13,3,1.01,0,"1 nonsynonymous","S113G",1
"lib1","SARS-CoV-2","TCCCAATACGCATCTT",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D D98I S129T",3
"lib1","SARS-CoV-2","TCCCAATAGACAAAAA",17,34.92,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","T3P R16P T55Y R73Q G146P P169R",6
"lib1","SARS-CoV-2","TCCCAATGACAGACGC",4,0.12,NA,NA,NA,NA,NA,NA,"stop","N24G S36L G51A F62A D90* L125T",6
"lib1","SARS-CoV-2","TCCCAATTAATGACAC",5,33.29,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","S19R T55I D90L Y119S C150N",5
"lib1","SARS-CoV-2","TCCCAATTACCCAGGT",5,96.75,10.49,-0.28,0.06,2.85,1.07,0,">1 nonsynonymous","F8M A42S T55N",3
"lib1","SARS-CoV-2","TCCCAATTCGAAAAAC",3,58.77,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D68G P133G T148G C150F Y178N",5
"lib1","SARS-CoV-2","TCCCAATTGCTCGTAG",3,75.64,10.73,-0.04,0.06,2.91,1.07,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","TCCCAATTTGAAGGAA",5,36.46,10.87,0.11,0.08,2.84,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TCCCAATTTTCTGATT",5,106.74,9.95,-0.82,0.1,2.32,1,0,">1 nonsynonymous","V37P S69W",2
"lib1","SARS-CoV-2","TCCCACAAATAAATGA",2,78.56,10.69,-0.08,0.05,2.88,1.07,0,"1 nonsynonymous","Y50W",1
"lib1","SARS-CoV-2","TCCCACAAATCTGCGC",2,28.07,10.51,-0.25,0.06,2.91,1.03,0,"1 nonsynonymous","L183I",1
"lib1","SARS-CoV-2","TCCCACAAATGAAGCC",2,33.43,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R73V Y119W",2
"lib1","SARS-CoV-2","TCCCACAAGATCTGTC",3,90.21,8.27,-2.5,0.12,1.72,1.12,0,">1 nonsynonymous","G74D G146S",2
"lib1","SARS-CoV-2","TCCCACACAAAATATC",3,93.6,6.29,-4.47,0.39,1.5,1.13,0.01,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","TCCCACACGGAAGTTG",15,59.37,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T100G V103R D112C Y165S",4
"lib1","SARS-CoV-2","TCCCACAGACCAGATG",2,9.51,7.3,-3.46,0.54,1.71,1.04,0.04,">1 nonsynonymous","A14V N58E D90A S147A E154F",5
"lib1","SARS-CoV-2","TCCCACAGGGCGCCCG",5,20.42,6.58,-4.18,0.25,1.5,1.03,0.01,">1 nonsynonymous","A22E C61G C158P T201N",4
"lib1","SARS-CoV-2","TCCCACCACGCGAAAT",3,18.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T55L R78C A81K R124Y K199R",5
"lib1","SARS-CoV-2","TCCCACCAGAAGGGAG",2,16.89,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P96L G155L",2
"lib1","SARS-CoV-2","TCCCACCATGTGTTGT",4,41.69,6.35,-4.42,0.79,1.5,1.24,0.05,">1 nonsynonymous","G117P T148M Q176K V180E",4
"lib1","SARS-CoV-2","TCCCACCCAACTAGTA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y C61S G116D L183H",4
"lib1","SARS-CoV-2","TCCCACCCCAATAATG",3,6.27,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","V20H D34N",2
"lib1","SARS-CoV-2","TCCCACCTTGTATTAT",5,35.97,6,-4.76,0.77,1.5,1.1,0.01,">1 nonsynonymous","C6A V71L N107P T201S",4
"lib1","SARS-CoV-2","TCCCACGAAAAGAGAT",9,2.84,NA,NA,NA,NA,NA,NA,"stop","S19L S41M T46V V77* Q84R P96M S129M",7
"lib1","SARS-CoV-2","TCCCACGCTAAGCTGG",7,21.55,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","V32P I104S A145C",3
"lib1","SARS-CoV-2","TCCCACGTAGTGGAAT",3,4.34,NA,NA,NA,NA,NA,NA,"stop","G83R P96V K114*",3
"lib1","SARS-CoV-2","TCCCACGTTTTAAGCA",2,34.08,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","N64C Q84H G101L G166E T201E",5
"lib1","SARS-CoV-2","TCCCACTAAGCAAGAC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","D90R V103G Y143* P177S P197F",5
"lib1","SARS-CoV-2","TCCCACTAGTGTGCTA",4,69.31,10.57,-0.2,0.1,2.89,1.05,0,">1 nonsynonymous","C61S I142L",2
"lib1","SARS-CoV-2","TCCCACTTGATCCAAC",3,0.03,NA,NA,NA,NA,NA,NA,"stop","N13C D90S S113T R124A Y165*",5
"lib1","SARS-CoV-2","TCCCAGAAATTCCTAC",6,87.21,10.73,-0.03,0.05,2.87,1.07,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","TCCCAGAAGTGAGAAA",5,34.47,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P96N N107Y",2
"lib1","SARS-CoV-2","TCCCAGACAAGAGTCT",4,15.39,6.07,-4.69,0.74,1.5,1.04,0.01,">1 nonsynonymous","D59W G86M F99Q",3
"lib1","SARS-CoV-2","TCCCAGACATTTTACC",2,5.41,10.58,-0.18,0.08,3,1,0,"1 nonsynonymous","R16K",1
"lib1","SARS-CoV-2","TCCCAGATGGGTTGTT",5,68.5,6.93,-3.84,0.25,1.5,1.13,0.01,">1 nonsynonymous","A18S D137P",2
"lib1","SARS-CoV-2","TCCCAGCAATAGAGCT",9,79.74,6.62,-4.14,0.65,1.5,1.23,0.05,">1 nonsynonymous","K56R V103G N110S S139G G152F",5
"lib1","SARS-CoV-2","TCCCAGCAGACTACTC",11,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S Y35S S69W R136V",4
"lib1","SARS-CoV-2","TCCCAGCATAAGTGTG",1,8.45,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V32S C49L G117R",3
"lib1","SARS-CoV-2","TCCCAGCCTAACCCGA",4,94.33,10.45,-0.32,0.06,2.79,1.02,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","TCCCAGCCTACAATCG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","E10K K26V T46D L57M V77T G116*",6
"lib1","SARS-CoV-2","TCCCAGCGCTTGTAAT",14,170.93,8.27,-2.5,0.19,1.9,1.13,0.01,">1 nonsynonymous","L57C K87D T148I",3
"lib1","SARS-CoV-2","TCCCAGCTCTACCAAT",1,48.66,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6A Y175E T201Q",3
"lib1","SARS-CoV-2","TCCCAGGGCACACATC",11,130.81,10.29,-0.47,0.03,2.85,1.03,0,">1 nonsynonymous","I2C R16L A22H S36Q T55W",5
"lib1","SARS-CoV-2","TCCCAGTAAAGTTTTC",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F F99Y E141I F167W V182K",5
"lib1","SARS-CoV-2","TCCCAGTGCCTGTCAC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","K26T C49V P96L V103F P133* T170L",6
"lib1","SARS-CoV-2","TCCCAGTGGCCCGAAA",3,11.87,10.85,0.09,0.08,2.96,1.01,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TCCCATAAATCTCGAC",3,0.55,NA,NA,NA,NA,NA,NA,"stop","C61* A89K V173S",3
"lib1","SARS-CoV-2","TCCCATAACTCACGAG",7,27.85,6,-4.76,2,3,1.14,0,">1 nonsynonymous","S41T V52P W106A V115R",4
"lib1","SARS-CoV-2","TCCCATAACTCCATTA",2,50.1,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C102L C158R G166K P197T",4
"lib1","SARS-CoV-2","TCCCATAAGTAACAAT",16,29.31,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N13Y T100P D112Q",3
"lib1","SARS-CoV-2","TCCCATAATCGGTCCG",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S N30K N92M",3
"lib1","SARS-CoV-2","TCCCATAATTTCCACC",2,51.71,9,-1.76,0.1,2.7,1.18,0,">1 nonsynonymous","Y119C E141N",2
"lib1","SARS-CoV-2","TCCCATACCGTGACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G51T K94*",2
"lib1","SARS-CoV-2","TCCCATACGTCTAAGC",2,48.35,10.62,-0.14,0.05,2.94,1.03,0,"1 nonsynonymous","F156Y",1
"lib1","SARS-CoV-2","TCCCATAGGCAAATAC",3,62.04,10.41,-0.35,0.07,2.85,1.01,0,">1 nonsynonymous","A33T D90E",2
"lib1","SARS-CoV-2","TCCCATAGTAATTGTT",8,52.52,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8V N64R F156L P169T Q176R V182L",6
"lib1","SARS-CoV-2","TCCCATAGTTAGAATA",5,32.26,9.8,-0.96,0.2,2.19,1.09,0.02,">1 nonsynonymous","P7S A14M K56E D98F",4
"lib1","SARS-CoV-2","TCCCATATAAAAAAGC",3,15.24,7.33,-3.43,0.11,2.03,1.01,0,">1 nonsynonymous","R73E T140S G174R H189L",4
"lib1","SARS-CoV-2","TCCCATATCAGCCGTA",8,165.91,10.3,-0.46,0.04,2.88,1,0,">1 nonsynonymous","F8Y P149C F160Y V173H",4
"lib1","SARS-CoV-2","TCCCATCACTAACCTA",6,22.4,6.7,-4.07,0.68,1.5,1.14,0.06,">1 nonsynonymous","I104P F160Q",2
"lib1","SARS-CoV-2","TCCCATCAGCTATAGT",2,17.82,7.61,-3.15,0.37,1.5,1.06,0.04,">1 nonsynonymous","R27A Y35S V52A A89P",4
"lib1","SARS-CoV-2","TCCCATCATAGAAATT",5,16.74,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","A18Y L38Y A81C W106V",4
"lib1","SARS-CoV-2","TCCCATCCAGAAATCA",3,41.01,6.93,-3.83,0.34,1.5,1.11,0.04,"1 nonsynonymous","A89E",1
"lib1","SARS-CoV-2","TCCCATGAAAGAAATC",3,78.42,10.7,-0.06,0.06,2.94,1.02,0,">1 nonsynonymous","N58E T201G",2
"lib1","SARS-CoV-2","TCCCATGAGAGATGAT",1,7.27,8.78,-1.99,0.28,1.66,1.04,0.01,"1 nonsynonymous","P96I",1
"lib1","SARS-CoV-2","TCCCATGATTGGGATA",8,90.86,10.48,-0.28,0.04,2.87,1.04,0,">1 nonsynonymous","K132P S200C",2
"lib1","SARS-CoV-2","TCCCATTCGAATAAAC",4,45.72,10.6,-0.16,0.06,2.97,1.01,0,">1 nonsynonymous","V37L G116I K199I",3
"lib1","SARS-CoV-2","TCCCATTGAAAAAGTC",2,39.96,10.83,0.07,0.12,2.89,1.03,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TCCCATTGTAAGCGCA",9,30.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10N L38R D59A R78E A145N",5
"lib1","SARS-CoV-2","TCCCATTTTAAGTACA",2,29.69,10.48,-0.29,0.07,2.94,1.06,0,">1 nonsynonymous","S29H G83S",2
"lib1","SARS-CoV-2","TCCCATTTTTTCAACT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","T63A I104K G116T L131S N151*",5
"lib1","SARS-CoV-2","TCCCCAAAGACGAGAG",1,12.34,10.27,-0.49,0.11,2.84,1.08,0.01,">1 nonsynonymous","P7N N64D G152C",3
"lib1","SARS-CoV-2","TCCCCAACGGTTAATG",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74S K94S Y123M E141R N171T",5
"lib1","SARS-CoV-2","TCCCCAAGCCATTACT",4,1.81,NA,NA,NA,NA,NA,NA,"stop","V32K G172*",2
"lib1","SARS-CoV-2","TCCCCAATTTAAGTTA",5,73.52,9.98,-0.79,0.08,2.2,1.06,0,"1 nonsynonymous","A89Y",1
"lib1","SARS-CoV-2","TCCCCACAAACTGTTA",1,9.72,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","C31T I88L C158A",3
"lib1","SARS-CoV-2","TCCCCACATAAACCTA",7,69.38,10.15,-0.61,0.07,2.68,1.06,0,">1 nonsynonymous","L60P L95V",2
"lib1","SARS-CoV-2","TCCCCACGCACAACAC",7,162.89,10.78,0.01,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCCCAGAAGGTAACT",1,59.25,8.77,-2,0.16,2.02,1.24,0.01,">1 nonsynonymous","N13C Y35A K87T P149H",4
"lib1","SARS-CoV-2","TCCCCAGACACCATAC",2,25.53,8.75,-2.02,0.16,2.65,1.11,0.01,">1 nonsynonymous","S41M F47L K56D Y121I F156S",5
"lib1","SARS-CoV-2","TCCCCAGCCGAATAAC",9,0.63,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TCCCCAGGCTTAATCC",7,64.78,8.25,-2.51,0.18,2.76,1.03,0.01,">1 nonsynonymous","S41L F126S",2
"lib1","SARS-CoV-2","TCCCCAGGTACCGGTG",15,210.55,9.49,-1.27,0.05,2.7,1.09,0,">1 nonsynonymous","Y21M K87V P169S",3
"lib1","SARS-CoV-2","TCCCCATACATGGAAG",4,3.35,NA,NA,NA,NA,NA,NA,"stop","C61I I88R P133L P177L L187*",5
"lib1","SARS-CoV-2","TCCCCATCTTTTAACG",1,0.65,NA,NA,NA,NA,NA,NA,"stop","S36F N130I D137* K198N",4
"lib1","SARS-CoV-2","TCCCCATGCTCTGTTC",1,54.64,8.76,-2,0.12,2.56,1.11,0,">1 nonsynonymous","N1E Y119M K132P",3
"lib1","SARS-CoV-2","TCCCCATGTCTACGTT",2,35.25,9.92,-0.84,0.14,2.5,1.12,0.01,"1 nonsynonymous","S139W",1
"lib1","SARS-CoV-2","TCCCCATTAAGACGGA",2,22.32,10.3,-0.47,0.11,2.9,1.01,0,">1 nonsynonymous","F47V L122T V173F S184H T201I",5
"lib1","SARS-CoV-2","TCCCCATTAGAAAAAA",2,11.54,9.28,-1.48,0.13,1.76,1.07,0.01,">1 nonsynonymous","S43D S53I G83E N107Q",4
"lib1","SARS-CoV-2","TCCCCATTCCAACAGC",4,1.5,NA,NA,NA,NA,NA,NA,"stop","F70*",1
"lib1","SARS-CoV-2","TCCCCATTTTTAGAAT",9,113.88,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9Y K26E G51K G83F N107A G116L L125S S139N",8
"lib1","SARS-CoV-2","TCCCCCAAATCGGCCT",2,5.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V V11T D68E F134I F160A",5
"lib1","SARS-CoV-2","TCCCCCACATTAAAGT",1,1.42,NA,NA,NA,NA,NA,NA,"stop","F8* A42N D68* Q144I N157H Q176M",6
"lib1","SARS-CoV-2","TCCCCCATACCTAATG",10,41.08,6.37,-4.4,0.6,1.5,1.12,0.02,">1 nonsynonymous","P133A T170E F185K",3
"lib1","SARS-CoV-2","TCCCCCATATAATCCA",3,3.22,NA,NA,NA,NA,NA,NA,"stop","C49D Y66S T85S Y121W F160A Q168* Q176*",7
"lib1","SARS-CoV-2","TCCCCCCCAAGTCTAG",1,42.95,10.38,-0.39,0.04,2.88,1.07,0,">1 nonsynonymous","L60P Q163K",2
"lib1","SARS-CoV-2","TCCCCCCTGCTAGTAC",6,87.98,10.57,-0.19,0.04,2.97,1,0,">1 nonsynonymous","E141P V153H",2
"lib1","SARS-CoV-2","TCCCCCGAAAATCGAG",7,64.13,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","Y39V D90P",2
"lib1","SARS-CoV-2","TCCCCCGCAATCTCTG",2,6.97,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N13F K48C K114C F126S",4
"lib1","SARS-CoV-2","TCCCCCGCCCTTAAGC",6,16.68,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","S41H R136A I142K P149C F167S",5
"lib1","SARS-CoV-2","TCCCCCGGCAGGCCCA",8,111.08,6,-4.76,1.65,1.5,1.2,0.02,">1 nonsynonymous","C6I G117Q V173W",3
"lib1","SARS-CoV-2","TCCCCCGTGACGGACC",6,185.38,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T55G P177K",2
"lib1","SARS-CoV-2","TCCCCCTGCCTCATTA",2,247.4,9.09,-1.68,0.07,2.33,1.11,0,">1 nonsynonymous","Q84C S129T P177S",3
"lib1","SARS-CoV-2","TCCCCGAACCCGAGGC",3,34.47,9.89,-0.87,0.13,2.05,1.03,0.01,">1 nonsynonymous","F8P F62T",2
"lib1","SARS-CoV-2","TCCCCGCACACACTCC",2,18.29,7.08,-3.68,0.47,1.5,1.07,0.06,">1 nonsynonymous","Y66D N151Y P161L",3
"lib1","SARS-CoV-2","TCCCCGCTAATCAAAT",1,6.89,10.43,-0.33,0.34,2.13,1,0.04,"1 nonsynonymous","A14P",1
"lib1","SARS-CoV-2","TCCCCGCTCACCTAGG",3,51.57,10.7,-0.06,0.05,2.93,1.02,0,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","TCCCCGGATCATAATT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W D98R Y121K K132L G152S",5
"lib1","SARS-CoV-2","TCCCCGGGAAACCTCA",1,47.6,9.74,-1.03,0.08,2.83,1.01,0,">1 nonsynonymous","G51A D97S L125S",3
"lib1","SARS-CoV-2","TCCCCGTTCCATACTT",2,1088.44,10.58,-0.18,0.03,2.94,1.01,0,">1 nonsynonymous","V37Q S164W",2
"lib1","SARS-CoV-2","TCCCCTAAGGCTGATG",3,53.32,9.85,-0.91,0.07,2.17,1,0,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","TCCCCTCAATGATATA",1,31.24,10.54,-0.23,0.14,2.88,1,0.02,">1 nonsynonymous","N64D S129M",2
"lib1","SARS-CoV-2","TCCCCTCGTTACTATT",1,8,6.85,-3.91,0.32,1.92,1.12,0.03,">1 nonsynonymous","A89W E141I",2
"lib1","SARS-CoV-2","TCCCCTGGTCTATTAA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","N1* T46N F156R F167D",4
"lib1","SARS-CoV-2","TCCCCTGTATATCTAC",4,7.77,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34V D90V G101L Y121N",4
"lib1","SARS-CoV-2","TCCCCTTAGACCCTGG",7,58.55,7.22,-3.54,0.34,1.5,1.26,0.03,">1 nonsynonymous","A89I E141R S184L",3
"lib1","SARS-CoV-2","TCCCCTTCGGCTTAGG",2,67.97,9.07,-1.7,0.04,2.87,1.11,0,">1 nonsynonymous","K48I N110L G117S",3
"lib1","SARS-CoV-2","TCCCCTTGAATAAAGA",8,83.37,8.42,-2.34,0.13,1.78,1.11,0.01,">1 nonsynonymous","G9M S69T R136T G174L",4
"lib1","SARS-CoV-2","TCCCCTTGGCGAGTCT",1,6.17,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L38S D90C Y165V",3
"lib1","SARS-CoV-2","TCCCCTTTCAACGAAC",2,9.2,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S41R L95W",2
"lib1","SARS-CoV-2","TCCCGAATAGCTAAAG",3,7.46,8.92,-1.85,0.22,2.79,1.18,0.02,">1 nonsynonymous","L5G N120P",2
"lib1","SARS-CoV-2","TCCCGAATGCTTACTG",1,30.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","A81M G86T G152F",3
"lib1","SARS-CoV-2","TCCCGACAAATTGGAT",7,107.16,9.37,-1.39,0.12,1.63,1.14,0.01,">1 nonsynonymous","I2A N40V L60D K114R F160S",5
"lib1","SARS-CoV-2","TCCCGACACAGGACTA",9,0.27,NA,NA,NA,NA,NA,NA,"stop","F70S R124G K128*",3
"lib1","SARS-CoV-2","TCCCGAGAACTGCGAT",4,44.79,10.09,-0.68,0.08,2.66,1.03,0,">1 nonsynonymous","G9R L131I R136V S200T",4
"lib1","SARS-CoV-2","TCCCGAGACCCGTCTT",1,13.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20D F99Y",2
"lib1","SARS-CoV-2","TCCCGAGCCAGTACAT",7,2.35,NA,NA,NA,NA,NA,NA,"stop","I2K A33D D59E D75* D98T",5
"lib1","SARS-CoV-2","TCCCGAGGATCAACTA",1,26.47,10.6,-0.17,0.07,2.91,1.09,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","TCCCGATAACTCAAAA",8,112.71,7.97,-2.79,0.28,1.5,1.19,0.03,">1 nonsynonymous","C31K F47K C61R Q84E",4
"lib1","SARS-CoV-2","TCCCGATAGTTGCTGA",4,32.46,10.78,0.02,0.07,2.91,1.05,0,">1 nonsynonymous","L187K T201R",2
"lib1","SARS-CoV-2","TCCCGATATTAATGTG",1,31.57,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6Y N24Y V180G",3
"lib1","SARS-CoV-2","TCCCGATCATGCACCG",2,74.49,10.7,-0.06,0.04,2.96,1.01,0,"1 nonsynonymous","T63V",1
"lib1","SARS-CoV-2","TCCCGATTCCATAGCA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","K48* T140Y",2
"lib1","SARS-CoV-2","TCCCGCAAAATTTGAT",2,12.72,7.14,-3.62,0.27,1.79,1.16,0.01,"1 nonsynonymous","C158Y",1
"lib1","SARS-CoV-2","TCCCGCAACGACGTCT",3,48.22,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55P N92V C158Y",3
"lib1","SARS-CoV-2","TCCCGCACCTGGCCGC",6,54.38,10.73,-0.03,0.08,2.84,1.08,0,">1 nonsynonymous","V37S K48Q",2
"lib1","SARS-CoV-2","TCCCGCACGTTTTATG",4,0.72,NA,NA,NA,NA,NA,NA,"stop","S19K C49S F62*",3
"lib1","SARS-CoV-2","TCCCGCAGGGACTATG",7,1399.09,8.38,-2.39,0.12,2.8,1.05,0.01,">1 nonsynonymous","K132N Y175S K199I",3
"lib1","SARS-CoV-2","TCCCGCATTGCTTGAG",6,1.9,NA,NA,NA,NA,NA,NA,"stop","S41* P197T",2
"lib1","SARS-CoV-2","TCCCGCCATAAGAACC",3,77.47,10.7,-0.06,0.06,2.95,1.03,0,"1 nonsynonymous","N120M",1
"lib1","SARS-CoV-2","TCCCGCCTCAATTAAA",13,18.78,7.4,-3.37,0.41,1.5,1.09,0.05,">1 nonsynonymous","G9L Q84T D90R F156H V173S V182R",6
"lib1","SARS-CoV-2","TCCCGCGAAATCTCTA",5,18.35,6.58,-4.19,0.59,1.5,1.25,0.03,">1 nonsynonymous","C49I N120F K128R",3
"lib1","SARS-CoV-2","TCCCGCGGAAAAGCCA",4,60.3,9.32,-1.44,0.13,1.88,1.12,0.01,">1 nonsynonymous","T63V P133L",2
"lib1","SARS-CoV-2","TCCCGCTACAATACCC",11,153.88,6.03,-4.73,0.67,1.5,1.19,0.01,">1 nonsynonymous","K87S N92R",2
"lib1","SARS-CoV-2","TCCCGCTTAAACCCTG",5,85.76,10.58,-0.18,0.03,2.92,1.04,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TCCCGGAAGGAGAAAA",12,189.95,9.57,-1.19,0.1,2.04,1.12,0,">1 nonsynonymous","N30L Y91M",2
"lib1","SARS-CoV-2","TCCCGGACACAACGAA",6,116.62,10.46,-0.3,0.05,2.92,1.04,0,">1 nonsynonymous","N24T C61F N151S",3
"lib1","SARS-CoV-2","TCCCGGATGAAATTCT",9,1.94,NA,NA,NA,NA,NA,NA,"stop","R16* P54H Y93F F134I P149I G155V S164W",7
"lib1","SARS-CoV-2","TCCCGGCCTTAATCAA",7,115.84,10.78,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCCGGGGGGCCAGAG",1,11.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80F G174I",2
"lib1","SARS-CoV-2","TCCCGGTAAACCAGCG",1,21.79,6.16,-4.6,1.11,1.5,1.16,0.05,">1 nonsynonymous","I2S N64T N92P Y123V V173S",5
"lib1","SARS-CoV-2","TCCCGGTCCACAGCCG",5,1.04,NA,NA,NA,NA,NA,NA,"stop","L5* C31P I142H G152C Y178C G196F T201L",7
"lib1","SARS-CoV-2","TCCCGTACACACTCGT",2,65.86,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","S36E E141N V180G",3
"lib1","SARS-CoV-2","TCCCGTACTTTTACTT",2,23.55,10.28,-0.48,0.04,2.94,1.03,0,">1 nonsynonymous","N40L D97E K114E S129R",4
"lib1","SARS-CoV-2","TCCCGTATGGAGACAA",3,49.65,10.38,-0.38,0.05,2.85,1.03,0,">1 nonsynonymous","G83T T201Q",2
"lib1","SARS-CoV-2","TCCCGTCCAGATGTTA",4,27.63,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5R G86R N120V I138K",4
"lib1","SARS-CoV-2","TCCCGTCCGGGGGTAA",2,28.61,6.42,-4.34,0.7,1.5,1.21,0.04,">1 nonsynonymous","I28V T100P N151I",3
"lib1","SARS-CoV-2","TCCCGTCGACCCTCTA",2,16.45,6.48,-4.29,0.48,2.25,1.16,0.02,">1 nonsynonymous","E10L G86V A105G S113L G174I",5
"lib1","SARS-CoV-2","TCCCGTCGCCTGCTTT",2,78.07,10.73,-0.04,0.04,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCCGTGTCAGAGTCC",8,94.71,10.12,-0.64,0.1,2.69,1.02,0,">1 nonsynonymous","K48W L111Q",2
"lib1","SARS-CoV-2","TCCCGTGTTTACATTG",3,58.79,8.93,-1.83,0.07,2.86,1.1,0,">1 nonsynonymous","C61N F156E",2
"lib1","SARS-CoV-2","TCCCGTTAAACGCTAG",16,262.1,10.19,-0.58,0.04,2.71,1.02,0,"1 nonsynonymous","N24L",1
"lib1","SARS-CoV-2","TCCCGTTAGAACTGTA",1,7.24,6.98,-3.78,0.43,1.5,1.01,0.03,">1 nonsynonymous","G51F G116R Q176L S200N",4
"lib1","SARS-CoV-2","TCCCGTTTGCTATGAG",1,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T K94H Y119F",3
"lib1","SARS-CoV-2","TCCCGTTTTCATCCAG",4,94.64,8.46,-2.3,0.1,2.81,1.02,0,">1 nonsynonymous","A145S N157Y K199S",3
"lib1","SARS-CoV-2","TCCCTAAACGCGAATA",5,8.64,6.06,-4.71,1.76,1.5,1.3,0.07,">1 nonsynonymous","G83C P96Y",2
"lib1","SARS-CoV-2","TCCCTAAACTCCAAGT",4,2.19,NA,NA,NA,NA,NA,NA,"stop","S45L D68Q D90K D97* I104S S129P",6
"lib1","SARS-CoV-2","TCCCTAAACTGTACTA",12,49.03,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","W23S A81L W106V G146Y",4
"lib1","SARS-CoV-2","TCCCTAAATCATGGAA",4,57.8,10.6,-0.16,0.05,2.88,1.03,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","TCCCTAACACACAAAA",3,16.81,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23L S45Y P161R P197S",4
"lib1","SARS-CoV-2","TCCCTAACATCTATCA",2,50.42,8.42,-2.34,0.14,1.78,1.15,0.01,">1 nonsynonymous","F62V N118T R136T",3
"lib1","SARS-CoV-2","TCCCTAACCTAATCCC",6,57.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I72R T100Y",2
"lib1","SARS-CoV-2","TCCCTAACGTACTAAA",2,19.16,9.52,-1.25,0.1,2.5,1.1,0,">1 nonsynonymous","N58F T170S F185H",3
"lib1","SARS-CoV-2","TCCCTAATCGAACAAT",1,7.45,10.24,-0.52,0.15,2.85,1,0.01,">1 nonsynonymous","L5A D59P",2
"lib1","SARS-CoV-2","TCCCTACAAAGTACAC",5,39.63,6,-4.76,0.74,1.5,1.13,0,">1 nonsynonymous","S45K C49I D59I T85L Q144F H189Q",6
"lib1","SARS-CoV-2","TCCCTACAAGCCGGGA",5,37.3,10.67,-0.09,0.07,2.91,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TCCCTACAGCTTAGAA",2,6.64,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","L5S R27Y Y35S Q84N K94Y T100D N118P",7
"lib1","SARS-CoV-2","TCCCTACCCTGAACTT",12,83.96,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","D34P R127V E135L",3
"lib1","SARS-CoV-2","TCCCTACTCAAACGCT",3,18.58,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","T15S P82W G101E S108L S129C I138S T201R",7
"lib1","SARS-CoV-2","TCCCTACTTACAGAAT",6,99.64,10.15,-0.61,0.05,2.76,1.04,0,">1 nonsynonymous","A22G S139N",2
"lib1","SARS-CoV-2","TCCCTACTTTAACCAA",6,89.69,10.21,-0.56,0.08,2.89,1,0,">1 nonsynonymous","Y39C L111H S129V",3
"lib1","SARS-CoV-2","TCCCTAGATCTTCTCA",6,2.92,NA,NA,NA,NA,NA,NA,"stop","N4S G9M R73* G86M",4
"lib1","SARS-CoV-2","TCCCTAGCTCTTTATC",3,82.81,10.53,-0.23,0.06,2.86,1.05,0,">1 nonsynonymous","F134Q E141S",2
"lib1","SARS-CoV-2","TCCCTAGTCTTGCGGT",2,22.84,10.43,-0.34,0.06,2.85,1.01,0,">1 nonsynonymous","N4F Q144S V173L",3
"lib1","SARS-CoV-2","TCCCTATACTAGTGAA",2,34.71,6.99,-3.77,0.37,1.5,1.09,0.03,">1 nonsynonymous","L60Q K87Q L122V V182L",4
"lib1","SARS-CoV-2","TCCCTATCACTATGCG",7,148.89,8.06,-2.7,0.16,2.23,1.09,0.01,"1 nonsynonymous","Y143D",1
"lib1","SARS-CoV-2","TCCCTATCGAGGCCAT",1,1.47,NA,NA,NA,NA,NA,NA,"stop","C102I W106* R136M F160N",4
"lib1","SARS-CoV-2","TCCCTATTGTCGGAAG",1,8.14,10.08,-0.68,0.07,2.96,1,0,">1 nonsynonymous","S53Y T170G Y178H",3
"lib1","SARS-CoV-2","TCCCTATTTAAAAGAC",2,21.93,6,-4.76,1.85,3,1.13,0,">1 nonsynonymous","D68P C102P W106E S129E",4
"lib1","SARS-CoV-2","TCCCTATTTCACAGAC",1,43.83,10.7,-0.06,0.1,2.85,1.05,0,">1 nonsynonymous","V37D F134L",2
"lib1","SARS-CoV-2","TCCCTATTTTTCATTA",7,143,10.07,-0.7,0.04,2.71,1.04,0,">1 nonsynonymous","R78L D98L",2
"lib1","SARS-CoV-2","TCCCTCAAAAACGAAT",8,92.78,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","V20Q K48V F62E D98Q",4
"lib1","SARS-CoV-2","TCCCTCAAAGGCAACG",7,66.38,6.37,-4.39,0.59,1.5,1.19,0.02,">1 nonsynonymous","P54S G86E",2
"lib1","SARS-CoV-2","TCCCTCAACGAGATCT",19,24.43,6.42,-4.35,0.78,1.5,1.34,0.04,">1 nonsynonymous","I2P R27I L60F P82L",4
"lib1","SARS-CoV-2","TCCCTCACCTTCCTGC",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P G83H",2
"lib1","SARS-CoV-2","TCCCTCAGCTCTATAT",8,54.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95Q",1
"lib1","SARS-CoV-2","TCCCTCATAAGACATA",2,33.09,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T3L R27E D68M I142S P169V K198L",6
"lib1","SARS-CoV-2","TCCCTCATCCCATATA",2,10.2,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","Y66S I72N L122T Q163P",4
"lib1","SARS-CoV-2","TCCCTCATGATTGCAG",1,8.45,10.52,-0.24,0.37,1.64,1.12,0.06,">1 nonsynonymous","A14F D34N Y178F T201S",4
"lib1","SARS-CoV-2","TCCCTCATGTTGTCTC",4,53.76,10.73,-0.03,0.08,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCCTCCACCTCAATA",2,76.22,9.66,-1.11,0.05,2.79,1.07,0,">1 nonsynonymous","A33G F126W",2
"lib1","SARS-CoV-2","TCCCTCCTCCCGGCCA",1,42.18,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","I80G",1
"lib1","SARS-CoV-2","TCCCTCGCTAGCTATC",2,10.38,6,-4.76,2,3,1.04,0,">1 nonsynonymous","L38K C61P R179F",3
"lib1","SARS-CoV-2","TCCCTCGGTGAGCAGT",1,18.03,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L38R V77E S147A Y178P",4
"lib1","SARS-CoV-2","TCCCTCGTATTAGATA",3,34.25,8.56,-2.21,0.15,2.54,1.13,0.01,">1 nonsynonymous","I2V Y119V S139M",3
"lib1","SARS-CoV-2","TCCCTCTAGCCCGGTA",1,47.14,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N157A Q176K P177E",3
"lib1","SARS-CoV-2","TCCCTCTAGGTTAATC",2,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D P82V",2
"lib1","SARS-CoV-2","TCCCTCTCTATGCACG",10,55.19,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","P96D I104Q L122K",3
"lib1","SARS-CoV-2","TCCCTCTCTTACGTTA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M D90W D112L Y119A",4
"lib1","SARS-CoV-2","TCCCTCTGATAACAGA",9,25.1,7,-3.77,0.42,1.5,1.18,0.03,">1 nonsynonymous","T3I V20L A105T P197S",4
"lib1","SARS-CoV-2","TCCCTCTGCACCTCCA",11,77.75,9.5,-1.26,0.16,1.72,1.09,0.01,"1 nonsynonymous","P82S",1
"lib1","SARS-CoV-2","TCCCTCTTGCCGTAAA",9,136.61,10.12,-0.64,0.07,2.51,1,0,">1 nonsynonymous","T15L Y50F T63L",3
"lib1","SARS-CoV-2","TCCCTCTTTCAACCAT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L K94P F99T S184W",4
"lib1","SARS-CoV-2","TCCCTGAAATTAACAA",7,46.06,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2V S36L A105R D137T",4
"lib1","SARS-CoV-2","TCCCTGAAGTTTTGAA",1,16.19,9.05,-1.71,0.23,1.6,1.25,0.03,">1 nonsynonymous","L60A A81M E141Y",3
"lib1","SARS-CoV-2","TCCCTGACAGTTAGCC",5,1.72,NA,NA,NA,NA,NA,NA,"stop","V32L D97S R179*",3
"lib1","SARS-CoV-2","TCCCTGATGCCCGGCC",3,15.7,7.47,-3.3,0.26,1.5,1.14,0.02,">1 nonsynonymous","T3P S36L A81L N151S",4
"lib1","SARS-CoV-2","TCCCTGCCCATGGCAT",2,72.64,10.73,-0.03,0.04,2.99,1,0,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","TCCCTGCCCCAAACCG",3,44.93,10.26,-0.51,0.06,2.82,1,0,"1 nonsynonymous","Y121N",1
"lib1","SARS-CoV-2","TCCCTGGAGTTGAAAT",4,20.84,8.3,-2.46,0.11,2.43,1.06,0,">1 nonsynonymous","K87R N107T F156T",3
"lib1","SARS-CoV-2","TCCCTGGCTAAGTACT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49* I72S G86E",3
"lib1","SARS-CoV-2","TCCCTGGGACTCCTTA",4,119.57,6,-4.76,1.34,1.5,1.13,0.02,">1 nonsynonymous","F8S N107D F167G",3
"lib1","SARS-CoV-2","TCCCTGTCCCCCGTTT",8,42.5,8.03,-2.74,0.19,2.17,1.18,0.01,">1 nonsynonymous","F12L C31G F126A",3
"lib1","SARS-CoV-2","TCCCTGTGAAGAAAAC",2,72.08,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3L N40Y N92S N120D Q176H",5
"lib1","SARS-CoV-2","TCCCTGTGTAAAAGAA",1,37.54,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","V77I D97E C158H",3
"lib1","SARS-CoV-2","TCCCTTACGGTGGTAC",2,12.81,10.43,-0.34,0.09,2.86,1.09,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TCCCTTAGAAGCGATC",8,65.06,10.39,-0.38,0.06,2.92,1,0,">1 nonsynonymous","P7L K48E",2
"lib1","SARS-CoV-2","TCCCTTAGGTAGAAAA",2,17.16,10.83,0.06,0.13,2.94,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCCTTATAAGTCTTG",21,257.41,10.65,-0.12,0.04,2.91,1.04,0,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","TCCCTTCAAAAGGTCA",2,10.92,7.12,-3.64,0.51,1.5,1.04,0.07,">1 nonsynonymous","N24S F99C A105S G172Y",4
"lib1","SARS-CoV-2","TCCCTTCAATCTAGTC",1,18.36,6.74,-4.02,0.48,1.5,1.15,0.03,"1 nonsynonymous","C158D",1
"lib1","SARS-CoV-2","TCCCTTCAGCAAACTT",2,6.69,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","Y35K K56V A105R N118S N151L",5
"lib1","SARS-CoV-2","TCCCTTCTGAGACTGC",1,41.89,10.64,-0.13,0.06,2.93,1.05,0,">1 nonsynonymous","L95V N120D",2
"lib1","SARS-CoV-2","TCCCTTCTTCCTTTAC",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E A42M T46L V103I",4
"lib1","SARS-CoV-2","TCCCTTGACTATGGAA",4,21.13,10.7,-0.06,0.04,2.95,1.02,0,"1 nonsynonymous","E135A",1
"lib1","SARS-CoV-2","TCCCTTGCAAAGCTGT",9,93.74,8.53,-2.23,0.07,2.6,1.11,0,">1 nonsynonymous","K26N N120T Y175F",3
"lib1","SARS-CoV-2","TCCCTTGGGACAGTCA",1,63.17,9.7,-1.06,0.11,2.54,1.09,0,">1 nonsynonymous","C6W T55D G116K",3
"lib1","SARS-CoV-2","TCCCTTGTACCATGTG",7,25.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78L G86Y",2
"lib1","SARS-CoV-2","TCCCTTTAAGACATTT",4,129.26,10.19,-0.57,0.06,2.65,1,0,">1 nonsynonymous","C61F G83S Q163C T201Q",4
"lib1","SARS-CoV-2","TCCCTTTAATATCTAT",4,30.46,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N13F Y39C D59P W106R Q168T",5
"lib1","SARS-CoV-2","TCCCTTTCCAACTCTA",2,50.98,10.64,-0.12,0.04,2.96,1,0,">1 nonsynonymous","N58P D59Y G116S",3
"lib1","SARS-CoV-2","TCCCTTTGGATGCACA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","Y50* R78* Y91L V103E",4
"lib1","SARS-CoV-2","TCCCTTTTAAATGTAT",1,30.1,10.62,-0.14,0.07,2.88,1,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","TCCCTTTTATGACGAT",9,20.06,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","S41Y G83A F99N G146W",4
"lib1","SARS-CoV-2","TCCCTTTTTCGAATCA",5,68.47,10.86,0.1,0.08,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TCCGAAAACCAAGCCG",1,9.31,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10L F99L G101V E186C",4
"lib1","SARS-CoV-2","TCCGAAAACGCGCAGT",9,75.52,9.56,-1.2,0.09,2.01,1.08,0,">1 nonsynonymous","V11L L38D S43R Q84E E141N",5
"lib1","SARS-CoV-2","TCCGAAAAGATCACCT",4,79.03,10.49,-0.28,0.04,2.89,1.05,0,">1 nonsynonymous","N1V D98G L122Q N130T P149T",5
"lib1","SARS-CoV-2","TCCGAAAAGTAGGTCC",5,21.01,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y91E D97N Y123S G152N",4
"lib1","SARS-CoV-2","TCCGAAAATATACGAT",3,76.16,8.86,-1.9,0.09,2.68,1.13,0,">1 nonsynonymous","C6T L125P",2
"lib1","SARS-CoV-2","TCCGAAAATGGCCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* F99C",2
"lib1","SARS-CoV-2","TCCGAAAATGTACGGC",3,6.42,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","L5A Y93W Q144Y",3
"lib1","SARS-CoV-2","TCCGAAACATTGAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83I D97* T170S",3
"lib1","SARS-CoV-2","TCCGAAACCCAAAATG",1,97.53,10.59,-0.17,0.05,2.95,1,0,">1 nonsynonymous","N64Y K87F",2
"lib1","SARS-CoV-2","TCCGAAAGATAATCAG",2,47.79,8.2,-2.57,0.3,1.5,1.05,0.03,">1 nonsynonymous","A89Y G146T",2
"lib1","SARS-CoV-2","TCCGAAAGCAACGCGC",1,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K T85K P96F N118I",4
"lib1","SARS-CoV-2","TCCGAAATTAATGAGC",9,243.81,8.38,-2.38,0.12,2.23,1.13,0.01,">1 nonsynonymous","T55D Y175K",2
"lib1","SARS-CoV-2","TCCGAACACAAATAGC",10,83.82,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","N4R N120T L125D R136G V153A F185V",6
"lib1","SARS-CoV-2","TCCGAACAGGTATCTC",3,0.54,NA,NA,NA,NA,NA,NA,"stop","F17E S41K G116W C150A T201*",5
"lib1","SARS-CoV-2","TCCGAACCAATTACGC",2,21.6,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V37N Y121A G146V",3
"lib1","SARS-CoV-2","TCCGAACCCACAACAA",1,19.08,10.66,-0.11,0.13,2.94,1.04,0.01,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","TCCGAACGCATCATTG",10,22.99,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","D90K F99I A105P Y121R E141Q P149T V153L",7
"lib1","SARS-CoV-2","TCCGAACTCCAACAAC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","V32Q T55A C61D K87* G166I",5
"lib1","SARS-CoV-2","TCCGAACTGCAGCCTA",7,79.89,8.4,-2.36,0.16,2.2,1.16,0.01,">1 nonsynonymous","D59G K94A F126K",3
"lib1","SARS-CoV-2","TCCGAACTTAACTAAT",5,58.04,10.33,-0.43,0.11,2.23,1.01,0,"1 nonsynonymous","E76G",1
"lib1","SARS-CoV-2","TCCGAAGACATTGGGA",1,10.29,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","C31Y K87G K94W",3
"lib1","SARS-CoV-2","TCCGAAGCCGGTGTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* S53F L95T",3
"lib1","SARS-CoV-2","TCCGAAGCTCCGCCGG",1,1.32,NA,NA,NA,NA,NA,NA,"stop","E10F A42R D98* G117R I142S S184M",6
"lib1","SARS-CoV-2","TCCGAATACAGCATAC",3,98.48,9.91,-0.86,0.07,2.72,1.02,0,">1 nonsynonymous","G83N A105V L188M",3
"lib1","SARS-CoV-2","TCCGAATCATTAATAC",8,147.77,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R73L G166Y G172T P191F T201R",5
"lib1","SARS-CoV-2","TCCGAATGACGTTTAC",5,50.37,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","L5M G74S C158T",3
"lib1","SARS-CoV-2","TCCGAATGCCTATCAC",7,91.74,9.86,-0.9,0.09,2.04,1.06,0,">1 nonsynonymous","D90Y D97R K128R",3
"lib1","SARS-CoV-2","TCCGAATTAAACCATA",4,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10C S45K A105N",3
"lib1","SARS-CoV-2","TCCGAATTTATGAAAC",4,52.27,9.32,-1.45,0.19,1.5,1.06,0.02,">1 nonsynonymous","K87R V103A S164P",3
"lib1","SARS-CoV-2","TCCGACAACCAGTAGA",2,51.51,8.17,-2.59,0.1,1.79,1.08,0,">1 nonsynonymous","D90C N118L",2
"lib1","SARS-CoV-2","TCCGACAAGCAATTCC",7,118.61,9.81,-0.96,0.05,2.78,1.03,0,"1 nonsynonymous","T170P",1
"lib1","SARS-CoV-2","TCCGACACAACGCTTA",2,24.17,10.09,-0.67,0.1,2.67,1,0,"1 nonsynonymous","Y91S",1
"lib1","SARS-CoV-2","TCCGACACCGACCAGC",2,22.71,6.28,-4.48,0.67,1.5,1.19,0.02,">1 nonsynonymous","C61W D137A",2
"lib1","SARS-CoV-2","TCCGACACGCGCACAT",7,84.49,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D59R Y66N I88S Y178L",4
"lib1","SARS-CoV-2","TCCGACAGATGCCTAG",9,3.21,NA,NA,NA,NA,NA,NA,"stop","F8* Q84G P96C",3
"lib1","SARS-CoV-2","TCCGACATAGATCCTT",2,14.56,10.34,-0.43,0.23,1.78,1,0.02,">1 nonsynonymous","Y91F L131N",2
"lib1","SARS-CoV-2","TCCGACCAACTGAACA",4,49.34,6.59,-4.17,0.55,1.5,1.1,0.04,">1 nonsynonymous","T55A T85F P96L K128E",4
"lib1","SARS-CoV-2","TCCGACCAATTAGGAG",7,67.4,10.83,0.07,0.07,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGACCAGCTCGCGG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","D59L A145*",2
"lib1","SARS-CoV-2","TCCGACCCAGTGCAGG",2,81.62,8.83,-1.94,0.14,1.88,1.18,0.01,">1 nonsynonymous","W106M I142Q",2
"lib1","SARS-CoV-2","TCCGACCCGCAAGACA",9,130.2,9.65,-1.11,0.1,1.79,1.14,0.01,">1 nonsynonymous","Y50F I88M T148V",3
"lib1","SARS-CoV-2","TCCGACGAAAATAACT",3,77.5,10.84,0.07,0.09,2.88,1.08,0,">1 nonsynonymous","V37L N171I",2
"lib1","SARS-CoV-2","TCCGACGACAGGTTCT",3,37.04,10.68,-0.09,0.07,2.81,1.14,0,">1 nonsynonymous","L5Y I28L P149L",3
"lib1","SARS-CoV-2","TCCGACGATTAAATCG",2,8.11,6,-4.76,1.84,3,1.12,0.01,">1 nonsynonymous","N4V Y91T Y119C D137H N151T",5
"lib1","SARS-CoV-2","TCCGACGGGAATTTGC",2,50.43,10.39,-0.38,0.06,2.92,1.06,0,"1 nonsynonymous","D97C",1
"lib1","SARS-CoV-2","TCCGACTAAATAAATC",3,34.96,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","I88K R136L L162T",3
"lib1","SARS-CoV-2","TCCGACTATGCAAATT",3,42.89,10.03,-0.73,0.09,2.78,1.05,0,">1 nonsynonymous","Y39N G152L F160S",3
"lib1","SARS-CoV-2","TCCGACTCTTTTGATA",4,87.51,10.11,-0.65,0.05,2.86,1.01,0,">1 nonsynonymous","C6G V77L",2
"lib1","SARS-CoV-2","TCCGACTGCTCAAACC",11,65.54,8.65,-2.12,0.19,1.5,1.08,0.02,">1 nonsynonymous","Q84L W106S",2
"lib1","SARS-CoV-2","TCCGACTGGAAACGGA",1,67.27,10.66,-0.11,0.05,2.88,1.09,0,">1 nonsynonymous","T15S P149M P197R",3
"lib1","SARS-CoV-2","TCCGACTTATTCCGAG",2,76.78,8,-2.76,0.24,1.72,1.14,0.02,">1 nonsynonymous","F44E K128M G166L",3
"lib1","SARS-CoV-2","TCCGAGAGACCAATGT",2,48.98,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","TCCGAGCAGACATTGT",6,33.1,10.62,-0.15,0.06,2.88,1.06,0,">1 nonsynonymous","L122I S129T K132T T201R",4
"lib1","SARS-CoV-2","TCCGAGCCCATCCTCG",2,12.88,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A105L R127I P169E",3
"lib1","SARS-CoV-2","TCCGAGCGAAGTGCAC",1,25.03,10.67,-0.1,0.09,2.91,1.08,0,">1 nonsynonymous","P54Q N171I",2
"lib1","SARS-CoV-2","TCCGAGCTACACTCCG",2,83.65,10.5,-0.27,0.08,2.75,1.05,0,">1 nonsynonymous","F44L T148Y Q163Y T201R",4
"lib1","SARS-CoV-2","TCCGAGGAGCTCTGGA",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A R27N N92Q K114V Y119C",5
"lib1","SARS-CoV-2","TCCGAGGCCAATAAAC",4,79.11,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V11C L38I P161F",3
"lib1","SARS-CoV-2","TCCGAGGTGAGTCTCA",2,11.84,6.01,-4.75,1.21,1.5,1.25,0.05,">1 nonsynonymous","F44L T55G D90M I142E",4
"lib1","SARS-CoV-2","TCCGAGTATTTGGCTA",1,47.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H R179S",2
"lib1","SARS-CoV-2","TCCGAGTCAATACAGT",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K T15Y S113R E135V",4
"lib1","SARS-CoV-2","TCCGAGTCTGCCTCCA",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W D34F D137T K199V",4
"lib1","SARS-CoV-2","TCCGAGTTAGATCTTG",2,37.35,7.85,-2.92,0.14,1.82,1.09,0,">1 nonsynonymous","N118H I142S",2
"lib1","SARS-CoV-2","TCCGATAAAAAAGTAT",2,63.54,10.68,-0.08,0.06,2.86,1.05,0,">1 nonsynonymous","K56D V173Y",2
"lib1","SARS-CoV-2","TCCGATAAAGGATAGT",4,41.4,6,-4.76,2,3,1.1,0,">1 nonsynonymous","R73T R136F Y175D",3
"lib1","SARS-CoV-2","TCCGATACATCTGAGT",4,15.25,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","C6D C61F F167S",3
"lib1","SARS-CoV-2","TCCGATACCATGTCTC",1,9.97,8.59,-2.17,0.16,2.77,1.08,0.01,">1 nonsynonymous","G83K S113W",2
"lib1","SARS-CoV-2","TCCGATAGCAGGACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","D90E T100I P149I F185*",4
"lib1","SARS-CoV-2","TCCGATCACTGCACCA",2,113.93,10.72,-0.04,0.08,2.88,1.08,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","TCCGATCATTATAGAG",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y Y93L",2
"lib1","SARS-CoV-2","TCCGATCTTATCCAGG",9,23.47,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","S36E A42T G51S R127S P133K C158S",6
"lib1","SARS-CoV-2","TCCGATGCCTTTGCCA",1,48.31,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","T15S Y121A F160T F167S Y175K",5
"lib1","SARS-CoV-2","TCCGATTAAACTGAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","Y50* A89Y Y119M",3
"lib1","SARS-CoV-2","TCCGATTATCATTCCC",4,20.83,10.93,0.17,0.11,2.86,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TCCGATTATTAGAGAA",7,85.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L95N K128S N157G Q176V",4
"lib1","SARS-CoV-2","TCCGATTCCTGGTGAA",2,0.49,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","TCCGATTCTTAGACGC",2,45.59,10.24,-0.52,0.07,2.93,1.01,0,"1 nonsynonymous","Q176M",1
"lib1","SARS-CoV-2","TCCGATTGACGGGTAG",3,32.65,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","E10R V37T F99Y N107W",4
"lib1","SARS-CoV-2","TCCGATTGCGTCCCGG",14,165.79,9.98,-0.78,0.04,2.91,1.01,0,">1 nonsynonymous","N120V Q168M",2
"lib1","SARS-CoV-2","TCCGCAAAACCCTGAA",6,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N K94T L131G",3
"lib1","SARS-CoV-2","TCCGCAAAAGTACCAG",4,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L S184P",2
"lib1","SARS-CoV-2","TCCGCAAAGATAAGTG",1,51.54,9.88,-0.89,0.21,2.01,1.12,0.02,">1 nonsynonymous","I2N I28E",2
"lib1","SARS-CoV-2","TCCGCAATAACTTGGC",3,0.92,NA,NA,NA,NA,NA,NA,"stop","I88* Y123K",2
"lib1","SARS-CoV-2","TCCGCACAAGCGATCA",2,26.36,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N107D I142N T148F",3
"lib1","SARS-CoV-2","TCCGCACACGAATACC",1,12.17,10.61,-0.15,0.09,2.87,1.07,0,">1 nonsynonymous","V11I D59L",2
"lib1","SARS-CoV-2","TCCGCACGACTGTCAA",1,8.9,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","D90T V103M K128P P177F",4
"lib1","SARS-CoV-2","TCCGCACGTTACGGCC",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24L S36L Y119E",3
"lib1","SARS-CoV-2","TCCGCACTAGAGGATT",1,19.51,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","V32A Y35S C61T D97H W106R G152N",6
"lib1","SARS-CoV-2","TCCGCAGAACCTCTAC",5,294.53,7.75,-3.02,0.24,1.5,1.1,0.02,">1 nonsynonymous","L60R N107I",2
"lib1","SARS-CoV-2","TCCGCAGAAGACAGAA",1,5.11,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L57G W106H",2
"lib1","SARS-CoV-2","TCCGCAGACAATTAAG",2,33.52,6,-4.76,1.82,3,1.09,0,">1 nonsynonymous","F70I P96M N107T Y143C",4
"lib1","SARS-CoV-2","TCCGCAGACTCTTTAA",2,23.76,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F44T I88C N157I R179F",4
"lib1","SARS-CoV-2","TCCGCAGGACATCAAC",1,9.87,10.02,-0.74,0.2,2.69,1.03,0.01,">1 nonsynonymous","S41Q G146W T201K",3
"lib1","SARS-CoV-2","TCCGCAGGATGCAGTA",2,47.54,10.52,-0.25,0.08,2.9,1.01,0,">1 nonsynonymous","E10S P54A D98E",3
"lib1","SARS-CoV-2","TCCGCATACGACGAAA",9,288.98,10.82,0.06,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGCATTACTCTGTA",1,20.53,8.81,-1.96,0.33,1.5,1,0.07,">1 nonsynonymous","L60V S139R F167L",3
"lib1","SARS-CoV-2","TCCGCCAAATTCAAAA",6,114.42,10.72,-0.05,0.06,2.87,1.07,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","TCCGCCAACCTAACGG",4,56.03,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y143K N157Y",2
"lib1","SARS-CoV-2","TCCGCCAAGCAACCGC",1,9.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15W D75P T100R",3
"lib1","SARS-CoV-2","TCCGCCAATATCTAAA",2,28.56,9.32,-1.44,0.06,2.53,1.01,0,">1 nonsynonymous","N1C L122V Y143L",3
"lib1","SARS-CoV-2","TCCGCCATTCACAGCT",2,71.24,9.62,-1.14,0.09,2.81,1.11,0,">1 nonsynonymous","A89P Y119R",2
"lib1","SARS-CoV-2","TCCGCCATTGCAACCA",4,53.28,6.58,-4.19,0.59,1.5,1.08,0.04,">1 nonsynonymous","K128S T148A S164L F167L",4
"lib1","SARS-CoV-2","TCCGCCGGCAGGACAA",1,9.49,10.65,-0.11,0.07,3,1.01,0,"1 nonsynonymous","I2C",1
"lib1","SARS-CoV-2","TCCGCCTAAATTCACT",1,15.51,8.57,-2.2,0.07,2.72,1.04,0,">1 nonsynonymous","S36M N58K G166R",3
"lib1","SARS-CoV-2","TCCGCCTTCGTTAAAG",6,18.35,6,-4.76,2,1.5,1.14,0.04,"1 nonsynonymous","L183R",1
"lib1","SARS-CoV-2","TCCGCGCGTACATGGA",6,1.3,NA,NA,NA,NA,NA,NA,"stop","A14T R27S G101L T148*",4
"lib1","SARS-CoV-2","TCCGCTACCCCCCACA",4,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V V20W S41I P82T N130F",5
"lib1","SARS-CoV-2","TCCGCTACGCATAACC",5,24.2,6.38,-4.39,0.72,1.5,1.34,0.03,">1 nonsynonymous","G155K L183C",2
"lib1","SARS-CoV-2","TCCGCTACTTAATTAT",1,7,10.84,0.08,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGCTAGCTCTATTG",4,74.82,10.75,-0.01,0.05,2.97,1.02,0,">1 nonsynonymous","S43D Q84T",2
"lib1","SARS-CoV-2","TCCGCTATTAAAAAAA",2,29.28,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D90N F99V P177D",3
"lib1","SARS-CoV-2","TCCGCTCCTAGATAGA",2,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P161G G172I E186L",3
"lib1","SARS-CoV-2","TCCGCTCGCAAAAATT",1,7.34,10.82,0.05,0.16,2.98,1,0,"1 nonsynonymous","F62I",1
"lib1","SARS-CoV-2","TCCGCTCTAATCTGTC",4,74.95,10.44,-0.33,0.05,2.88,1.01,0,"1 nonsynonymous","G174R",1
"lib1","SARS-CoV-2","TCCGCTCTTTTCCAAC",5,0.63,NA,NA,NA,NA,NA,NA,"stop","V115N Y143S P149R A192*",4
"lib1","SARS-CoV-2","TCCGCTGAATTAGCAT",5,58.34,6.81,-3.95,0.42,1.5,1.14,0.03,">1 nonsynonymous","S147R C150R T201M",3
"lib1","SARS-CoV-2","TCCGCTGAGTAAACAC",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P F99C W106A",3
"lib1","SARS-CoV-2","TCCGCTGCTATGAGTC",3,67.1,9.3,-1.46,0.2,1.56,1.13,0.02,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","TCCGCTGTAGCCGGTA",1,9.45,10.63,-0.13,0.12,2.81,1.13,0,">1 nonsynonymous","S41N C61W",2
"lib1","SARS-CoV-2","TCCGCTGTTGAATATT",1,13.35,10.93,0.17,0.11,2.99,1.01,0.01,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","TCCGCTTCAAGACTGA",2,68.21,10.11,-0.65,0.08,2.81,1,0,">1 nonsynonymous","F44S G152T S184T",3
"lib1","SARS-CoV-2","TCCGCTTGCTCAAGCA",2,21.07,9.31,-1.46,0.1,2.87,1.13,0,">1 nonsynonymous","L5K Y39V Y119L",3
"lib1","SARS-CoV-2","TCCGCTTTTCACAAAA",1,14.96,10.82,0.06,0.12,2.95,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCGGAAAAACACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R124K T201*",2
"lib1","SARS-CoV-2","TCCGGAAAGACATACA",3,24.99,8.44,-2.33,0.14,2.03,1.05,0.01,">1 nonsynonymous","N107Q G116S T148Y",3
"lib1","SARS-CoV-2","TCCGGAACGTGTTAGT",3,62.61,10.7,-0.07,0.05,2.9,1.05,0,"1 nonsynonymous","A18E",1
"lib1","SARS-CoV-2","TCCGGACAGAAAGCAG",2,74.54,10.74,-0.03,0.07,2.9,1.03,0,">1 nonsynonymous","L60Q T201A",2
"lib1","SARS-CoV-2","TCCGGACCGATCATTG",1,21.8,10.62,-0.14,0.06,2.93,1,0,"1 nonsynonymous","F185L",1
"lib1","SARS-CoV-2","TCCGGACGCCCAAATA",6,85.25,10.74,-0.03,0.05,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGGACGCGCACGGT",1,128.26,10.41,-0.36,0.04,2.92,1.03,0,">1 nonsynonymous","V37R N130V F156L",3
"lib1","SARS-CoV-2","TCCGGACTAGGAAATA",4,27.48,9.43,-1.33,0.19,1.72,1.14,0.02,">1 nonsynonymous","K56I A81F",2
"lib1","SARS-CoV-2","TCCGGACTTAGATCTA",9,40.73,6,-4.76,2,1.79,1.25,0.01,">1 nonsynonymous","N1T L5N F47L D59T V180K",5
"lib1","SARS-CoV-2","TCCGGACTTTTAGGTA",1,51.53,6.63,-4.14,0.23,1.5,1.08,0.01,">1 nonsynonymous","I138C C158V",2
"lib1","SARS-CoV-2","TCCGGAGAGACAAATT",3,37.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V20E T85K",2
"lib1","SARS-CoV-2","TCCGGAGATGCTCACT",5,26.41,6.25,-4.52,0.64,1.5,1.11,0.02,"1 nonsynonymous","I72P",1
"lib1","SARS-CoV-2","TCCGGATAACTCCCAT",9,159.99,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100V G166L Y175R",3
"lib1","SARS-CoV-2","TCCGGATATCTAGAGA",1,11.78,10.8,0.04,0.09,3,1.04,0,">1 nonsynonymous","N40E K87R",2
"lib1","SARS-CoV-2","TCCGGATGACGCAAAC",3,7.77,8.09,-2.67,0.43,1.5,1,0.07,">1 nonsynonymous","C61V I72M D98A I104L",4
"lib1","SARS-CoV-2","TCCGGCAAAAGGTTCA",2,75.54,10.71,-0.05,0.1,2.92,1.07,0,">1 nonsynonymous","T15S A192D",2
"lib1","SARS-CoV-2","TCCGGCACCCATAGAA",3,54.28,10.82,0.06,0.09,2.94,1.01,0,">1 nonsynonymous","T55G T201M",2
"lib1","SARS-CoV-2","TCCGGCAGAAAATACC",5,102.08,9.8,-0.97,0.17,1.89,1.05,0.01,">1 nonsynonymous","F12Y D90R",2
"lib1","SARS-CoV-2","TCCGGCAGATACCCAT",6,26.05,6,-4.76,2,2.09,1.15,0.01,">1 nonsynonymous","T3S C31T V37W V103Y E135R",5
"lib1","SARS-CoV-2","TCCGGCCATAAAAATA",2,51.61,10.66,-0.1,0.09,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGGCCCATATGTCT",2,24.31,7.29,-3.47,0.43,1.5,1.09,0.05,">1 nonsynonymous","L125V F167M",2
"lib1","SARS-CoV-2","TCCGGCCTGAGAAACC",3,12.77,6.61,-4.15,0.41,1.5,1.04,0.02,">1 nonsynonymous","C6A C61Q Y91S A105T",4
"lib1","SARS-CoV-2","TCCGGCGCCCATGATA",1,16.17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L57R A105V",2
"lib1","SARS-CoV-2","TCCGGGACAACTATAG",3,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K L60D D90T N107A P169G",5
"lib1","SARS-CoV-2","TCCGGGAGAAATAAGT",2,153.59,10.41,-0.35,0.04,2.89,1.01,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","TCCGGGCGAATAGGTA",6,131.64,6.21,-4.56,0.79,1.5,1.2,0.03,">1 nonsynonymous","R73F S129A N157S",3
"lib1","SARS-CoV-2","TCCGGGCTAATAATAT",2,25.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T Y165K",2
"lib1","SARS-CoV-2","TCCGGGGGATTAAGAT",5,50.51,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51M N58S L162D",3
"lib1","SARS-CoV-2","TCCGGGTAACCAAAAA",3,23.06,10.59,-0.17,0.1,2.78,1.2,0,"1 nonsynonymous","T140A",1
"lib1","SARS-CoV-2","TCCGGGTTAAGCAGTA",1,17.1,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F44T D90L A105T Q176W",4
"lib1","SARS-CoV-2","TCCGGTACTGACGTTA",1,77.56,8.59,-2.18,0.18,1.5,1.01,0.01,">1 nonsynonymous","G86C Y123K",2
"lib1","SARS-CoV-2","TCCGGTCTACTACTGA",1,17.95,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","L95E",1
"lib1","SARS-CoV-2","TCCGGTCTTAGAGAGA",5,87.92,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y35V Y50S N58T A81C R124H S184L",6
"lib1","SARS-CoV-2","TCCGGTCTTATCGAGT",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q A89D W106K F126Y E135Y E154V",6
"lib1","SARS-CoV-2","TCCGGTGAGAAATCCC",6,91.22,8.47,-2.29,0.14,2.02,1.18,0.01,">1 nonsynonymous","N118L P149C",2
"lib1","SARS-CoV-2","TCCGGTGCTCGATCCT",5,29.31,8.27,-2.49,0.21,1.5,1.03,0.02,">1 nonsynonymous","N13L Y91T H189N",3
"lib1","SARS-CoV-2","TCCGGTGTACATACAT",5,47.57,10.72,-0.05,0.11,2.76,1.04,0.01,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","TCCGGTTAATTATTAT",5,75.48,9.23,-1.53,0.07,2.83,1.12,0,">1 nonsynonymous","Q84G Y119T G155Q",3
"lib1","SARS-CoV-2","TCCGTAACACCAACTT",3,55.06,10.26,-0.5,0.06,2.83,1.05,0,">1 nonsynonymous","L57M T148C",2
"lib1","SARS-CoV-2","TCCGTAACGGTTCGTG",2,77.56,10.85,0.08,0.08,2.92,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGTAACTTACCGTG",6,4.45,NA,NA,NA,NA,NA,NA,"stop","L5P T100* Q176* V182T",4
"lib1","SARS-CoV-2","TCCGTAATTATCTATC",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133T A145S P169F",3
"lib1","SARS-CoV-2","TCCGTAATTTCCAGCC",2,1.02,NA,NA,NA,NA,NA,NA,"stop","V77K G172* T201W",3
"lib1","SARS-CoV-2","TCCGTACCAGAGCCCT",1,12.72,6,-4.76,1.62,1.5,1.07,0,"1 nonsynonymous","P177W",1
"lib1","SARS-CoV-2","TCCGTACCTTCAGGTC",4,182.67,7.86,-2.91,0.17,1.5,1.13,0.01,">1 nonsynonymous","F12V V37S S45K Q84S Y119V",5
"lib1","SARS-CoV-2","TCCGTACGACTCCCGC",12,106.31,10.84,0.07,0.07,2.89,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGTACGCTTCGGTT",2,36.75,10.2,-0.57,0.04,2.81,1,0,">1 nonsynonymous","Y66D G116K",2
"lib1","SARS-CoV-2","TCCGTACTGAGCTGAA",7,10.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106M P149I L162G",3
"lib1","SARS-CoV-2","TCCGTAGAATTACTAA",7,20.2,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","C6V I88T T170M",3
"lib1","SARS-CoV-2","TCCGTAGCGTCTAAAA",1,17.32,9.81,-0.95,0.12,2.09,1.03,0.01,">1 nonsynonymous","F62L Q168R V181L",3
"lib1","SARS-CoV-2","TCCGTATTATAAATAA",3,96.01,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12C D59M Y121V",3
"lib1","SARS-CoV-2","TCCGTCAAGGTATTGC",3,48.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R27F L60D G101I N118F C150Y C158Q",6
"lib1","SARS-CoV-2","TCCGTCAGTACACCAT",1,35.5,10.22,-0.54,0.09,2.4,1.03,0,">1 nonsynonymous","L60F I104S L122S",3
"lib1","SARS-CoV-2","TCCGTCCAAGATGATG",7,68.84,10.16,-0.6,0.06,2.81,1,0,">1 nonsynonymous","S45H D98I",2
"lib1","SARS-CoV-2","TCCGTCCAGAAAAGGG",3,82.37,9.4,-1.37,0.06,2.72,1.1,0,">1 nonsynonymous","D59I Y119R",2
"lib1","SARS-CoV-2","TCCGTCCCTAAATTTA",1,76.27,10.44,-0.33,0.08,2.79,1.07,0,">1 nonsynonymous","F62A Y178T",2
"lib1","SARS-CoV-2","TCCGTCCCTAGATATG",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E F126L",2
"lib1","SARS-CoV-2","TCCGTCCCTCTGGGCC",1,11.29,9.51,-1.26,0.22,2.43,1,0.03,">1 nonsynonymous","C6L A33P",2
"lib1","SARS-CoV-2","TCCGTCTAACAGCCGC",5,52.93,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F47R Y93I",2
"lib1","SARS-CoV-2","TCCGTGACTATACAGA",8,135.76,10.54,-0.22,0.03,2.93,1,0,"1 nonsynonymous","A81K",1
"lib1","SARS-CoV-2","TCCGTGATAACTCTAT",4,16.53,6,-4.76,1.67,1.5,1.17,0.03,">1 nonsynonymous","S41L L95T K114P",3
"lib1","SARS-CoV-2","TCCGTGCGAATAGATA",1,40.78,9.98,-0.78,0.06,2.43,1,0,">1 nonsynonymous","W106S T201M",2
"lib1","SARS-CoV-2","TCCGTTAACGTTTCAA",12,154.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19K K87N Y119Q Y175S",4
"lib1","SARS-CoV-2","TCCGTTAATCAAGTTG",1,53.62,10.72,-0.04,0.06,2.92,1.06,0,">1 nonsynonymous","D59Y V173I",2
"lib1","SARS-CoV-2","TCCGTTAATCTAGCAG",4,70.62,9.88,-0.89,0.1,2.21,1.08,0,">1 nonsynonymous","T15Y D59C",2
"lib1","SARS-CoV-2","TCCGTTACACATCTAC",8,119.11,10.73,-0.04,0.05,2.89,1.04,0,">1 nonsynonymous","G9K S200Q",2
"lib1","SARS-CoV-2","TCCGTTAGTCGATACG",7,157.6,9.84,-0.92,0.04,2.84,1.03,0,">1 nonsynonymous","L5P I28A K87I S139Q",4
"lib1","SARS-CoV-2","TCCGTTATCAAGGGAG",5,72.18,8.79,-1.97,0.23,1.5,1.19,0.02,">1 nonsynonymous","A81T D90S N120R G152K",4
"lib1","SARS-CoV-2","TCCGTTCAGTTAAAAA",4,88.38,10.42,-0.34,0.05,2.89,1.07,0,">1 nonsynonymous","Y35L C49V T55G L122Y",4
"lib1","SARS-CoV-2","TCCGTTCCAAAGTTAC",4,21.43,8.65,-2.11,0.35,1.54,1.12,0.06,">1 nonsynonymous","A89Y K114N V115M",3
"lib1","SARS-CoV-2","TCCGTTCCACCAAAAT",2,7.88,6,-4.76,2,3,1.02,0,">1 nonsynonymous","L5R I88L K94Y F99I T201P",5
"lib1","SARS-CoV-2","TCCGTTCCCCTGAAAC",5,95.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9V G51S D137S Q176W",4
"lib1","SARS-CoV-2","TCCGTTCCTAGTAACG",1,5.59,9.39,-1.37,0.21,2.76,1,0.01,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TCCGTTGCACAGTTAG",2,7.87,6,-4.76,2,3,1.17,0.02,">1 nonsynonymous","I88N S113K Y121V",3
"lib1","SARS-CoV-2","TCCGTTGGCATCCAGT",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S D112L",2
"lib1","SARS-CoV-2","TCCGTTGTACGCCCCC",3,24.24,10.66,-0.11,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCGTTGTAGCAACAA",3,2.36,NA,NA,NA,NA,NA,NA,"stop","P169* Q176S",2
"lib1","SARS-CoV-2","TCCGTTTAAGGACATT",3,52.8,8.5,-2.27,0.1,2.48,1.05,0,">1 nonsynonymous","N151I N157M",2
"lib1","SARS-CoV-2","TCCGTTTCTCGCTGGT",2,7.84,6,-4.76,2,3,1.02,0,">1 nonsynonymous","L60G A105P K128V",3
"lib1","SARS-CoV-2","TCCGTTTTCCCTGTGG",1,8.27,6.86,-3.9,0.68,2.26,1,0.07,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","TCCGTTTTGTCATATA",5,66.76,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","T15G G172D",2
"lib1","SARS-CoV-2","TCCTAAAAAATTATAT",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68I E154P",2
"lib1","SARS-CoV-2","TCCTAAAAATAAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42P D68W E141* G174R",4
"lib1","SARS-CoV-2","TCCTAAAAATTAAACG",11,41.02,9.86,-0.9,0.12,2.25,1.07,0,">1 nonsynonymous","A33S E135K",2
"lib1","SARS-CoV-2","TCCTAAAAGGAGTAAA",8,57.97,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F44M I80R N120L F160H",4
"lib1","SARS-CoV-2","TCCTAAACCTCCCCAA",1,13.31,10.49,-0.28,0.2,1.97,1.02,0.01,">1 nonsynonymous","T15F Q144G",2
"lib1","SARS-CoV-2","TCCTAAACGGTCAATA",2,62.37,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y21V I72C T85G I88M N118C R127Y F160N G166R",8
"lib1","SARS-CoV-2","TCCTAAACTGTTTGAC",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C E141L",2
"lib1","SARS-CoV-2","TCCTAAAGCACTCAAA",4,1.88,NA,NA,NA,NA,NA,NA,"stop","V52N G86* G146S Y175S",4
"lib1","SARS-CoV-2","TCCTAAAGGCTGACTC",2,37.57,8.6,-2.17,0.19,1.5,1.09,0.02,">1 nonsynonymous","V77R D90Y",2
"lib1","SARS-CoV-2","TCCTAAATAGTCCTTG",20,133.61,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","G101V P161K",2
"lib1","SARS-CoV-2","TCCTAAATTCTGACTA",3,45.34,10.79,0.02,0.05,2.94,1.03,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","TCCTAAATTTATAAAA",5,34.31,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G86V L95H D112V K128W C158F",5
"lib1","SARS-CoV-2","TCCTAACATAAAATAG",1,21.93,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R25F S45C I104S G155Y",4
"lib1","SARS-CoV-2","TCCTAACATCGCAACT",2,8.48,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P96R Y119S G174Y",3
"lib1","SARS-CoV-2","TCCTAACATGTTGTAC",2,25.72,9.99,-0.77,0.13,2.13,1.02,0.01,">1 nonsynonymous","A67S F99W",2
"lib1","SARS-CoV-2","TCCTAACTCATAATTA",5,97.48,10.85,0.08,0.05,2.94,1.01,0,">1 nonsynonymous","R16F K94R L122Q",3
"lib1","SARS-CoV-2","TCCTAACTCCTTTGAC",7,77.29,8.3,-2.46,0.14,2.2,1.13,0.01,">1 nonsynonymous","N13F I72V A145D",3
"lib1","SARS-CoV-2","TCCTAACTTAAACGGC",6,66.02,10.23,-0.54,0.07,2.52,1.02,0,">1 nonsynonymous","P7T T15L D34V",3
"lib1","SARS-CoV-2","TCCTAAGATGCACCGA",1,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V Y91S Y121V S129A S147N N157Q G174S T201G",8
"lib1","SARS-CoV-2","TCCTAAGCTACAAGTG",2,22.82,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","TCCTAAGGACCAGAAA",4,51.13,10.73,-0.03,0.12,2.79,1.02,0.01,">1 nonsynonymous","I2P E141D",2
"lib1","SARS-CoV-2","TCCTAAGTGGGCACTT",2,71.91,6,-4.76,1.07,3,1.14,0,">1 nonsynonymous","K56I I142F F167S",3
"lib1","SARS-CoV-2","TCCTAATAAAAAAAAA",2,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L L95F",2
"lib1","SARS-CoV-2","TCCTAATAAACATTTT",4,30.23,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","P82D G146F P161M",3
"lib1","SARS-CoV-2","TCCTAATAAATACAGA",7,0.79,NA,NA,NA,NA,NA,NA,"stop","E10* S41P R73L C158P",4
"lib1","SARS-CoV-2","TCCTAATAAATGAATG",9,79.89,8.67,-2.1,0.17,1.55,1.15,0.01,">1 nonsynonymous","Y35T S139W",2
"lib1","SARS-CoV-2","TCCTAATAAGCTCTGA",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R P82K T100I Y178P",4
"lib1","SARS-CoV-2","TCCTAATCAGTACTGC",3,9.22,NA,NA,NA,NA,NA,NA,"stop","G51P L60S W106G F126* G174D",5
"lib1","SARS-CoV-2","TCCTAATCTCTGAACC",1,27.89,10.69,-0.07,0.09,2.85,1.08,0,"1 nonsynonymous","N40P",1
"lib1","SARS-CoV-2","TCCTAATTAACACCCC",3,0.71,NA,NA,NA,NA,NA,NA,"stop","E10F K87Q T100H V153*",4
"lib1","SARS-CoV-2","TCCTAATTAATCCAAA",4,67.33,6.79,-3.97,0.17,1.8,1.15,0.01,">1 nonsynonymous","F47M F126E T170S",3
"lib1","SARS-CoV-2","TCCTACAAATCGATTA",2,11.77,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","P54A D90T F167S",3
"lib1","SARS-CoV-2","TCCTACAATACATCCA",6,151.7,10.08,-0.68,0.07,2.25,1,0,"1 nonsynonymous","F17P",1
"lib1","SARS-CoV-2","TCCTACACGGTAAATA",4,41.83,10.52,-0.24,0.06,2.96,1,0,">1 nonsynonymous","F134S Q168R Y178H",3
"lib1","SARS-CoV-2","TCCTACAGGGAGACAC",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y V37L P54N L95V W106I P133L",6
"lib1","SARS-CoV-2","TCCTACATTAAATATA",4,55.28,10.51,-0.25,0.06,2.89,1.02,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TCCTACCAAACGATAT",8,203.47,8.51,-2.25,0.12,1.98,1.1,0.01,"1 nonsynonymous","F167M",1
"lib1","SARS-CoV-2","TCCTACCACTCTAATT",4,14.71,6,-4.76,2,3,1.13,0,">1 nonsynonymous","K94V Q168P",2
"lib1","SARS-CoV-2","TCCTACCCCTGACCCT",3,0.61,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib1","SARS-CoV-2","TCCTACCGGGTGTCCC",5,100.83,10.69,-0.08,0.07,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTACCTAACGTTAT",3,61.52,10.11,-0.66,0.06,2.92,1.01,0,">1 nonsynonymous","A22E C61V G174M",3
"lib1","SARS-CoV-2","TCCTACCTCATTGTGA",4,59.85,10.64,-0.13,0.07,2.92,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTACCTGCATGTTT",5,21.44,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","L57R S139Y T201G",3
"lib1","SARS-CoV-2","TCCTACCTGGGATGCG",12,288.99,9.58,-1.18,0.05,2.85,1.08,0,"1 nonsynonymous","F156C",1
"lib1","SARS-CoV-2","TCCTACCTTCCTTGAA",1,26.03,10.53,-0.23,0.09,2.99,1.01,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TCCTACGATATTAAAG",8,107.05,10.61,-0.15,0.06,2.9,1.05,0,">1 nonsynonymous","V11L T63S",2
"lib1","SARS-CoV-2","TCCTACGATGCGTCGA",5,24.02,9.38,-1.38,0.29,1.5,1,0.04,">1 nonsynonymous","S41Q V103C",2
"lib1","SARS-CoV-2","TCCTACGGACCTGTCA",1,3.09,NA,NA,NA,NA,NA,NA,"stop","G51V G86R Y91P G174*",4
"lib1","SARS-CoV-2","TCCTACGGAGTCTTGC",6,2.26,NA,NA,NA,NA,NA,NA,"stop","R25G C102F I138*",3
"lib1","SARS-CoV-2","TCCTACGTGACTAAAA",2,16.01,10.78,0.01,0.08,2.88,1.07,0,"1 nonsynonymous","L5G",1
"lib1","SARS-CoV-2","TCCTACTAAGAACGCA",1,11.61,10.58,-0.19,0.13,3,1,0,">1 nonsynonymous","P54G T63R",2
"lib1","SARS-CoV-2","TCCTACTACACGAGAA",8,74.13,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F12L Q176G",2
"lib1","SARS-CoV-2","TCCTACTATTGTTAGC",3,45.92,6,-4.76,2,1.5,1.2,0.04,"1 nonsynonymous","V77D",1
"lib1","SARS-CoV-2","TCCTACTCACTCTGCG",4,101.11,10.51,-0.25,0.03,2.96,1.03,0,">1 nonsynonymous","S41Q K56L",2
"lib1","SARS-CoV-2","TCCTACTGGATAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61H G83T L95* W106*",4
"lib1","SARS-CoV-2","TCCTACTGGGGCCCAT",2,56.52,10.77,0,0.08,2.95,1.02,0,"1 nonsynonymous","T148D",1
"lib1","SARS-CoV-2","TCCTAGAAGTACTTTA",5,99.48,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9K K56V A89G R127T",4
"lib1","SARS-CoV-2","TCCTAGAATCCGCAGC",6,21.61,6,-4.76,2,3,1.21,0.02,">1 nonsynonymous","I72A A89W W106A G155S",4
"lib1","SARS-CoV-2","TCCTAGAGTTAGATTC",11,59.43,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38M G51F D68K T140Q",4
"lib1","SARS-CoV-2","TCCTAGCACGGCGGTG",4,43.33,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S36W F47V L131E",3
"lib1","SARS-CoV-2","TCCTAGCCGAAGTAGT",4,10.29,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","A14W C49N R78L P149V C158L V173N",6
"lib1","SARS-CoV-2","TCCTAGGAAACATCCG",2,38.19,9.92,-0.85,0.09,2.19,1.07,0,">1 nonsynonymous","N30I V115H F160H",3
"lib1","SARS-CoV-2","TCCTAGGAAACCCGAA",1,23.56,9.75,-1.01,0.14,2.41,1.07,0.01,">1 nonsynonymous","S19P A33D T201P",3
"lib1","SARS-CoV-2","TCCTAGGAACACTAGA",3,25.02,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T63Y D112V N118L P161Y",4
"lib1","SARS-CoV-2","TCCTAGGATATACCTA",2,10,7.69,-3.08,0.19,1.98,1.09,0.01,">1 nonsynonymous","P7Y A33D Y66C K87N",4
"lib1","SARS-CoV-2","TCCTAGGCATAACCAG",6,100.03,10.37,-0.39,0.06,2.91,1,0,">1 nonsynonymous","L5I V52F G152K N171I",4
"lib1","SARS-CoV-2","TCCTAGGCGTGTTTAT",1,10.55,9.46,-1.3,0.34,1.67,1.16,0.03,">1 nonsynonymous","Y39L Q84F L122R E135Y P149Q",5
"lib1","SARS-CoV-2","TCCTAGTAATCATACT",5,22.82,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","F44S I80L K94H G116M G146K",5
"lib1","SARS-CoV-2","TCCTAGTCCCTCTTGA",1,9.36,6,-4.76,1.55,1.5,1.14,0.01,">1 nonsynonymous","K26V Q84K F99R L122M E141C G155D Y178C",7
"lib1","SARS-CoV-2","TCCTAGTGCGAAGCAA",1,48.64,9.24,-1.53,0.07,2.67,1.14,0,">1 nonsynonymous","I142R E186D",2
"lib1","SARS-CoV-2","TCCTAGTGTACAAGTC",3,46.59,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9W K26S Y93V G146M",4
"lib1","SARS-CoV-2","TCCTAGTTTCGACAAT",2,43.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A18L S36V D68R F99I L122S",5
"lib1","SARS-CoV-2","TCCTATAAAAAGAAGA",5,39.61,6.47,-4.3,0.26,1.5,1.08,0.01,">1 nonsynonymous","P82R F167L",2
"lib1","SARS-CoV-2","TCCTATAATCCAGCTT",4,6.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33N F70N T100P",3
"lib1","SARS-CoV-2","TCCTATAATGAAGAAA",6,27.55,10.93,0.17,0.08,2.9,1.03,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","TCCTATACAACATGAC",2,49.48,10.59,-0.17,0.14,2.66,1.11,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCTATACAACGCTGA",3,24.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5G E10G Y35L S45L N118G D137E C150M",7
"lib1","SARS-CoV-2","TCCTATACAATATAGT",4,43.42,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y39P S139L Q144L E154N",4
"lib1","SARS-CoV-2","TCCTATACCCATTACC",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T Y91L G101Q",3
"lib1","SARS-CoV-2","TCCTATATGGACCAAT",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R L38T W106L",3
"lib1","SARS-CoV-2","TCCTATCAATAATCAG",7,75.7,9.53,-1.23,0.13,1.87,1.09,0.01,">1 nonsynonymous","S45V G155C",2
"lib1","SARS-CoV-2","TCCTATCGAAAAACTG",6,0.34,NA,NA,NA,NA,NA,NA,"stop","V77* K87F",2
"lib1","SARS-CoV-2","TCCTATCTTGTAGAAA",5,17.2,8.86,-1.9,0.37,1.64,1.19,0.05,">1 nonsynonymous","N13I T85N T148F",3
"lib1","SARS-CoV-2","TCCTATGGGCCTTTAC",5,32.88,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Y66V G101T D112Q I138H",4
"lib1","SARS-CoV-2","TCCTATGTTGGGAGAA",1,0.58,NA,NA,NA,NA,NA,NA,"stop","C61* I88K",2
"lib1","SARS-CoV-2","TCCTATTCAATGAATT",1,7.82,9.2,-1.57,0.13,2.72,1.26,0,">1 nonsynonymous","N1L N120T",2
"lib1","SARS-CoV-2","TCCTATTCTGGTCATA",2,15.94,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N30G S43C N58P R73G K128M Q176R",6
"lib1","SARS-CoV-2","TCCTATTGCATATAAT",5,191.88,7.96,-2.8,0.19,2.01,1.2,0.01,">1 nonsynonymous","A42G K114D N171D",3
"lib1","SARS-CoV-2","TCCTATTTTGAGCTAA",2,0.26,NA,NA,NA,NA,NA,NA,"stop","I2H F8E Y21S S45C C61G L95P L131* E154F T201S",9
"lib1","SARS-CoV-2","TCCTCAAAGAGGGCAG",5,42.99,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","C49M F167T",2
"lib1","SARS-CoV-2","TCCTCAAATAATAAAA",3,24.29,8.91,-1.86,0.17,2.27,1.23,0.01,">1 nonsynonymous","V37G P133V P169M",3
"lib1","SARS-CoV-2","TCCTCAAATTTTACGT",1,16.75,10.57,-0.19,0.08,2.54,1.01,0,">1 nonsynonymous","T15E P96S",2
"lib1","SARS-CoV-2","TCCTCAACCCGCTGAT",4,11.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15N G86A P149H F185Y",4
"lib1","SARS-CoV-2","TCCTCAAGGTAAAAGC",7,212.59,9.81,-0.95,0.06,2.69,1.03,0,">1 nonsynonymous","C6G S129M",2
"lib1","SARS-CoV-2","TCCTCAATCGATGTTA",3,23.51,9.29,-1.47,0.3,1.99,1.16,0.05,">1 nonsynonymous","E10L D34G N107P",3
"lib1","SARS-CoV-2","TCCTCAATTAGTTTTA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","C6* D112T",2
"lib1","SARS-CoV-2","TCCTCACATTCGCTGA",5,0,NA,NA,NA,NA,NA,NA,"stop","V37* L162G",2
"lib1","SARS-CoV-2","TCCTCACCAGTTCAAG",4,5.06,NA,NA,NA,NA,NA,NA,"stop","N30* G74R",2
"lib1","SARS-CoV-2","TCCTCACCATAGGCAT",9,171.48,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R16G P96N N107H Y175E",4
"lib1","SARS-CoV-2","TCCTCACCTACTATAT",8,0.68,NA,NA,NA,NA,NA,NA,"stop","Y35* L60F T85L L122Q",4
"lib1","SARS-CoV-2","TCCTCACGCCTCACGA",3,20.7,6,-4.76,2,3,1.12,0,">1 nonsynonymous","E10V T63R K132R Q144A C150T",5
"lib1","SARS-CoV-2","TCCTCACTAGCCTACA",1,29.55,10.42,-0.35,0.14,2.6,1.02,0.01,"1 nonsynonymous","F62K",1
"lib1","SARS-CoV-2","TCCTCACTATCCATTT",2,109.75,10.68,-0.09,0.06,2.88,1.08,0,">1 nonsynonymous","E10H I28F",2
"lib1","SARS-CoV-2","TCCTCAGAAATAACAC",12,70.08,8.87,-1.89,0.18,1.5,1.16,0.01,">1 nonsynonymous","A105W N151L S184R",3
"lib1","SARS-CoV-2","TCCTCAGAACTGCTGT",8,2.37,NA,NA,NA,NA,NA,NA,"stop","G9V K56Q N64I P96S S113* I142K G166M",7
"lib1","SARS-CoV-2","TCCTCAGTGCCTGTAT",2,10.56,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E141W R179G",2
"lib1","SARS-CoV-2","TCCTCATAATAAATAA",1,33.22,11.08,0.32,0.09,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTCATAGATGACGT",1,9.46,6,-4.76,2,1.5,1.06,0.05,">1 nonsynonymous","F44K D68E Y175V",3
"lib1","SARS-CoV-2","TCCTCATATTACACAA",2,51.55,10.65,-0.11,0.08,2.9,1,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","TCCTCATGGAGTGTCT",6,49.07,10.66,-0.1,0.05,2.91,1.01,0,">1 nonsynonymous","G9E E186V",2
"lib1","SARS-CoV-2","TCCTCATTGGCATGGG",4,26.51,10.66,-0.1,0.05,2.9,1,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","TCCTCCACCAACTGAG",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T P82R S139G N171Y",4
"lib1","SARS-CoV-2","TCCTCCACTATAGAAG",3,66.02,9.99,-0.77,0.08,2.53,1.04,0,">1 nonsynonymous","K56L E135K T148H",3
"lib1","SARS-CoV-2","TCCTCCACTCCCGACA",11,210.85,9.48,-1.28,0.09,1.85,1.08,0,"1 nonsynonymous","Y165R",1
"lib1","SARS-CoV-2","TCCTCCAGGCTAGCAA",2,45.79,9.92,-0.84,0.11,2.14,1.07,0,"1 nonsynonymous","A105H",1
"lib1","SARS-CoV-2","TCCTCCAGTACCCAAC",2,29.1,10.58,-0.18,0.11,2.99,1.04,0.01,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","TCCTCCATATAAGACG",3,2.67,NA,NA,NA,NA,NA,NA,"stop","Y21T T55Y S108* Q144R P197M",5
"lib1","SARS-CoV-2","TCCTCCATCTACACCT",3,26.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8L A18K S45K T46K S139F Y178I",6
"lib1","SARS-CoV-2","TCCTCCATTTTATTAA",5,61.5,10.75,-0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTCCCGAAACGTAA",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K W106S",2
"lib1","SARS-CoV-2","TCCTCCCGATACCGCA",2,12.47,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","Y119I C158N",2
"lib1","SARS-CoV-2","TCCTCCCGTAAATCAT",1,5.21,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V103N K114S",2
"lib1","SARS-CoV-2","TCCTCCGAACACGCCG",5,69.51,10.6,-0.16,0.08,2.86,1.09,0,">1 nonsynonymous","A33L F62L N151C",3
"lib1","SARS-CoV-2","TCCTCCGATATCCCGC",1,15.01,6,-4.76,2,3,1.11,0,">1 nonsynonymous","D90V P133W E141L R179K T201R",5
"lib1","SARS-CoV-2","TCCTCCGATCAGTAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","P54* F99T A105D Y159Q",4
"lib1","SARS-CoV-2","TCCTCCGTGAGTGCCA",1,29.28,10.45,-0.31,0.05,2.94,1,0,">1 nonsynonymous","A42T D90K C195F",3
"lib1","SARS-CoV-2","TCCTCCTACTCCAATT",1,9.9,6.19,-4.58,0.8,1.5,1.18,0.02,">1 nonsynonymous","V11P T15P G51Q K87N",4
"lib1","SARS-CoV-2","TCCTCCTCAAAAGACC",10,116.05,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K87G N151K C158W",3
"lib1","SARS-CoV-2","TCCTCCTCGGTCCGTA",21,8.97,NA,NA,NA,NA,NA,NA,"stop","R27N Y35S N64* D90T",4
"lib1","SARS-CoV-2","TCCTCCTCTTCTGAAC",1,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V52P",1
"lib1","SARS-CoV-2","TCCTCCTGTTACCCAT",5,35.77,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F47V G86D T100S G146F V173Y",5
"lib1","SARS-CoV-2","TCCTCCTTCCACGTTA",5,11.83,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F8V V103Q K114R",3
"lib1","SARS-CoV-2","TCCTCCTTCCAGGACA",1,7.22,10.23,-0.53,0.31,2.41,1,0.02,">1 nonsynonymous","A81S P96S",2
"lib1","SARS-CoV-2","TCCTCGAATGTACTGG",5,0.26,NA,NA,NA,NA,NA,NA,"stop","G9K S45E K114D L162*",4
"lib1","SARS-CoV-2","TCCTCGAGACTTACTA",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F Y66E Y119S F134S G172M S184V",6
"lib1","SARS-CoV-2","TCCTCGATACTCAAGT",10,172.5,9.5,-1.27,0.08,2.72,1.09,0,">1 nonsynonymous","F134N F156G",2
"lib1","SARS-CoV-2","TCCTCGCGTTCACCAC",5,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N T85K W106L D137Y G174T",5
"lib1","SARS-CoV-2","TCCTCGGAAAAAACAT",9,491.28,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40M V77K D90Y V115Y N151P",5
"lib1","SARS-CoV-2","TCCTCGGAATGAGGGG",3,0,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib1","SARS-CoV-2","TCCTCTAACAATCCCA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","T3L T140*",2
"lib1","SARS-CoV-2","TCCTCTAATTTATCAA",4,52,6,-4.76,1.71,1.5,1.22,0.01,">1 nonsynonymous","Y50I Y93R",2
"lib1","SARS-CoV-2","TCCTCTATGCGACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16I Y119*",2
"lib1","SARS-CoV-2","TCCTCTCTTGTCCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* R16L S45E E141F L162N",5
"lib1","SARS-CoV-2","TCCTCTTAGCTCTACC",7,27.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H A89S V115C V181C",4
"lib1","SARS-CoV-2","TCCTCTTCCCACCTTC",2,45.21,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","F167D Y178N",2
"lib1","SARS-CoV-2","TCCTCTTGTACTCCCG",2,0.36,NA,NA,NA,NA,NA,NA,"stop","I2F R16Q A42V C49F G101L Y119* K199N",7
"lib1","SARS-CoV-2","TCCTGAATGATACAGA",5,15.59,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y119S S129R P177S V182D",4
"lib1","SARS-CoV-2","TCCTGAATGATCTTAT",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V K56S A81P D112S K198N",5
"lib1","SARS-CoV-2","TCCTGACGAGAAGCGT",1,23.57,10.69,-0.07,0.18,2.71,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCCTGACGTTTTTGGA",1,17.81,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","Q84Y C158E",2
"lib1","SARS-CoV-2","TCCTGACTCGCTTATG",2,55.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y121P I142D F156R",3
"lib1","SARS-CoV-2","TCCTGAGAAAACACAA",3,60.66,10.74,-0.02,0.08,2.9,1.06,0,">1 nonsynonymous","P7N V173H",2
"lib1","SARS-CoV-2","TCCTGATCACCTTGTG",7,2.21,NA,NA,NA,NA,NA,NA,"stop","A33K W106*",2
"lib1","SARS-CoV-2","TCCTGCGAAATACGAT",10,294.29,10.03,-0.73,0.04,2.88,1.02,0,">1 nonsynonymous","G74A A190E",2
"lib1","SARS-CoV-2","TCCTGCTCCCAGTATA",5,96.15,8.7,-2.07,0.15,1.94,1.14,0.01,">1 nonsynonymous","F12L R27C S53E T85S I142R",5
"lib1","SARS-CoV-2","TCCTGCTTGTAACTGT",4,49.31,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S69E G83V",2
"lib1","SARS-CoV-2","TCCTGGAATGACTTAC",2,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L R16N Y39T Q84K F156W",5
"lib1","SARS-CoV-2","TCCTGGAGCAAACTCC",4,57.51,10.09,-0.68,0.08,2.39,1.04,0,">1 nonsynonymous","N1T D34G S129R",3
"lib1","SARS-CoV-2","TCCTGGTAGAACCAGG",6,78.41,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I28S G86M N107L N118C T140W F160T",6
"lib1","SARS-CoV-2","TCCTGGTTGAGCAATC",5,39.71,10.76,0,0.07,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTGTATCGCTCTAC",5,58.64,10.79,0.02,0.06,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTGTCAAGACAGTC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I2* T201S",2
"lib1","SARS-CoV-2","TCCTGTCCACCGCCAA",3,17.56,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G74A L162T",2
"lib1","SARS-CoV-2","TCCTGTCGTAGTGTAA",1,13.05,10.38,-0.38,0.12,3,1.06,0.01,">1 nonsynonymous","N40E K87R",2
"lib1","SARS-CoV-2","TCCTGTGCAAATAAGT",12,53.83,6.77,-3.99,0.54,1.5,1.18,0.06,">1 nonsynonymous","D59G F99S K114L Y175I",4
"lib1","SARS-CoV-2","TCCTGTGCTAAGATGA",1,58.1,9.16,-1.61,0.18,1.5,1.01,0.01,">1 nonsynonymous","E10L S36I R136C",3
"lib1","SARS-CoV-2","TCCTGTGTACCCTCAC",4,65.84,10.78,0.02,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTGTTTAATCAATC",3,8.26,9.81,-0.96,0.27,2.24,1.08,0.06,">1 nonsynonymous","N64K K94C G174N",3
"lib1","SARS-CoV-2","TCCTGTTTATCTAGAT",1,10.88,10.83,0.07,0.11,2.91,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTTAAAATATTGTA",13,65.46,7.38,-3.38,0.35,1.5,1.21,0.04,">1 nonsynonymous","N13M A18T V77L G83E S147Y",5
"lib1","SARS-CoV-2","TCCTTAAATAAACGTA",6,1.83,NA,NA,NA,NA,NA,NA,"stop","N151* Y165R V173Y T201K",4
"lib1","SARS-CoV-2","TCCTTAAATAATATGA",2,16.87,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","L57V Y91V C102N G152V S164L T201S",6
"lib1","SARS-CoV-2","TCCTTAAATAGAGAAT",5,3.5,NA,NA,NA,NA,NA,NA,"stop","N130V T201*",2
"lib1","SARS-CoV-2","TCCTTAATAAGTCATC",14,11.22,NA,NA,NA,NA,NA,NA,"stop","Y39* Y165N",2
"lib1","SARS-CoV-2","TCCTTAATCGGTTTTA",1,17.72,10.63,-0.14,0.09,2.97,1,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","TCCTTAATTCCAGAAC",3,46.96,10.23,-0.54,0.07,2.88,1.02,0,">1 nonsynonymous","L162V V173W",2
"lib1","SARS-CoV-2","TCCTTACAGTTGTTAA",1,25.7,8.17,-2.6,0.37,1.5,1.06,0.07,"1 nonsynonymous","Q176F",1
"lib1","SARS-CoV-2","TCCTTACCAAACCAAC",1,22.62,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","P161F",1
"lib1","SARS-CoV-2","TCCTTACCAAGTGTAA",6,87.96,10.49,-0.27,0.07,2.79,1.12,0,"1 nonsynonymous","K94A",1
"lib1","SARS-CoV-2","TCCTTACCGCCAAATG",12,95.36,7.09,-3.68,0.31,1.5,1.18,0.02,">1 nonsynonymous","Y21S L57D A81E Q163A",4
"lib1","SARS-CoV-2","TCCTTACGTATCGGGT",10,159.45,9.04,-1.72,0.14,1.5,1.14,0.01,"1 nonsynonymous","R25C",1
"lib1","SARS-CoV-2","TCCTTACGTTGATGGT",1,6.03,6,-4.76,1.91,3,1,0.01,">1 nonsynonymous","K94T C102K Q144L",3
"lib1","SARS-CoV-2","TCCTTACTCGCAAGTT",4,81.9,6.76,-4,0.27,1.5,1.16,0.01,">1 nonsynonymous","P7G G116N P169L Y175C",4
"lib1","SARS-CoV-2","TCCTTAGAACCACAGA",3,29.49,9.14,-1.62,0.11,2.78,1.17,0,">1 nonsynonymous","Y119S G166F",2
"lib1","SARS-CoV-2","TCCTTAGGACATAACC",4,80.13,10.37,-0.4,0.04,2.82,1.07,0,"1 nonsynonymous","N13Q",1
"lib1","SARS-CoV-2","TCCTTAGGCGTTAGTC",12,150.12,9.36,-1.4,0.16,1.5,1.04,0.01,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","TCCTTAGGGGAACTGC",8,111.83,9.97,-0.79,0.09,2.42,1.07,0,">1 nonsynonymous","N4G V52L A67F V153G",4
"lib1","SARS-CoV-2","TCCTTAGTCATGCATG",3,23.01,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","S43F C49L D68P",3
"lib1","SARS-CoV-2","TCCTTATGAGCATAAA",3,16.01,9.88,-0.88,0.12,2.16,1.09,0.01,">1 nonsynonymous","T85F Y91K",2
"lib1","SARS-CoV-2","TCCTTCAAACCGTTCC",3,134.96,8.79,-1.97,0.08,2.8,1.1,0,">1 nonsynonymous","N58A Y119V A145S",3
"lib1","SARS-CoV-2","TCCTTCACATTTAAAC",4,3.17,NA,NA,NA,NA,NA,NA,"stop","Q79* P96N S129P R136F F156D V182G",6
"lib1","SARS-CoV-2","TCCTTCAGATCTGTAG",2,5.78,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N107H K114L G152P P191L",4
"lib1","SARS-CoV-2","TCCTTCAGCGTTGCTT",1,40.36,9.96,-0.81,0.12,2.17,1.02,0.01,"1 nonsynonymous","V20T",1
"lib1","SARS-CoV-2","TCCTTCATAAACCGAA",5,18.04,10.88,0.11,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCCTTCATTGACCCCA",3,65.44,10.35,-0.41,0.04,2.82,1.02,0,"1 nonsynonymous","Y50H",1
"lib1","SARS-CoV-2","TCCTTCCACTGCTAAA",3,2.68,NA,NA,NA,NA,NA,NA,"stop","G101D L122*",2
"lib1","SARS-CoV-2","TCCTTCCATCCTTGGA",5,28.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I T100N Y143K",3
"lib1","SARS-CoV-2","TCCTTCCCATCCACCT",2,44.25,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6A A42M F70C F160I",4
"lib1","SARS-CoV-2","TCCTTCCTAACTATTA",6,113.17,8.97,-1.8,0.07,2.89,1.11,0,">1 nonsynonymous","V37Q G51Q Y119D K132L",4
"lib1","SARS-CoV-2","TCCTTCGACTAATTGA",2,11.42,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","E10K Y35V F44V S69T S113K P149H",6
"lib1","SARS-CoV-2","TCCTTCGGGTTAGTAA",1,27.82,7.96,-2.81,0.21,1.97,1.16,0.02,">1 nonsynonymous","G155Y T170Y",2
"lib1","SARS-CoV-2","TCCTTCGGTATCCTGG",2,32.64,9.93,-0.84,0.1,2.1,1.09,0,">1 nonsynonymous","Y39F P96K T193I",3
"lib1","SARS-CoV-2","TCCTTCGTCCTTTCAG",2,5.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","TCCTTCTAAGGAATTA",4,107.38,10.65,-0.12,0.03,2.9,1.06,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","TCCTTCTCATCATACT",22,363.5,10.77,0,0.05,2.92,1.05,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TCCTTCTCTTGGCGAG",1,8.87,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","N4K C31N S43D S53K Y91L L162T",6
"lib1","SARS-CoV-2","TCCTTGAAAATTGTCG",4,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105P S139I",2
"lib1","SARS-CoV-2","TCCTTGAACTTATAAT",2,25.73,9.39,-1.38,0.11,2.34,1.15,0,">1 nonsynonymous","Y39T K87N P96R",3
"lib1","SARS-CoV-2","TCCTTGAATTAGACAA",3,1.01,NA,NA,NA,NA,NA,NA,"stop","K94N D98E Y119* N151H",4
"lib1","SARS-CoV-2","TCCTTGACTGTTTTAT",16,218.54,10.74,-0.03,0.08,2.83,1.11,0,"1 nonsynonymous","V37M",1
"lib1","SARS-CoV-2","TCCTTGCAAACACGCT",2,15.03,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36C F62P S69K N157T",4
"lib1","SARS-CoV-2","TCCTTGCCAGATTGCA",2,53.4,10.27,-0.49,0.05,2.88,1,0,">1 nonsynonymous","N1S T15V",2
"lib1","SARS-CoV-2","TCCTTGCTATAAGGAA",9,45.41,9.61,-1.15,0.1,1.89,1.08,0,"1 nonsynonymous","L122P",1
"lib1","SARS-CoV-2","TCCTTGCTATACAAAT",1,1.33,NA,NA,NA,NA,NA,NA,"stop","W23G Y165* T170N",3
"lib1","SARS-CoV-2","TCCTTGCTTAAATATA",4,31.65,10.7,-0.07,0.1,2.83,1.06,0,">1 nonsynonymous","I28Y K132S E141D",3
"lib1","SARS-CoV-2","TCCTTGGAAACCTGAC",6,0.36,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib1","SARS-CoV-2","TCCTTGGTAAATTAGT",3,10.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13V L95Q Y123T",3
"lib1","SARS-CoV-2","TCCTTGTTAAGGCGGG",1,1.63,NA,NA,NA,NA,NA,NA,"stop","C61* P82G T100N L125H P133Q Y159S",6
"lib1","SARS-CoV-2","TCCTTTAATACTAGAC",1,19.96,6.26,-4.5,0.84,1.5,1.2,0.05,">1 nonsynonymous","N13I K56S G116Y N171H",4
"lib1","SARS-CoV-2","TCCTTTATAAGTAGAT",2,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V V71L P96D S129P Q168T",5
"lib1","SARS-CoV-2","TCCTTTATAATTTGCG",2,21.38,10.16,-0.61,0.08,2.93,1,0,"1 nonsynonymous","G155I",1
"lib1","SARS-CoV-2","TCCTTTATACACTGGA",3,23.14,10.03,-0.73,0.16,2.54,1.07,0.01,">1 nonsynonymous","S36A N58Y G83F",3
"lib1","SARS-CoV-2","TCCTTTCAAACCTTAT",8,23.45,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","K56Y N109M D137L",3
"lib1","SARS-CoV-2","TCCTTTCCCCTTGCAT",8,0.2,NA,NA,NA,NA,NA,NA,"stop","K56* R78S T100E G152S",4
"lib1","SARS-CoV-2","TCCTTTCCTCGTGCTC",3,36.04,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","K87V D97I I104S R127P",4
"lib1","SARS-CoV-2","TCCTTTCGAATGTCAA",7,63.42,10.66,-0.1,0.05,2.85,1.06,0,">1 nonsynonymous","T15K R27K L60V E154T",4
"lib1","SARS-CoV-2","TCCTTTCGAGATTATG",2,14.07,8,-2.76,0.25,1.83,1.13,0.05,">1 nonsynonymous","S36A W106V F126A",3
"lib1","SARS-CoV-2","TCCTTTCTGCAATACT",9,170.31,10.6,-0.17,0.06,2.91,1.01,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","TCCTTTGACATTAGAG",5,104.76,9.75,-1.01,0.05,2.81,1.07,0,">1 nonsynonymous","G9K Y39G S113G",3
"lib1","SARS-CoV-2","TCCTTTGACTGAGTGG",1,6.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K K132Q",2
"lib1","SARS-CoV-2","TCCTTTTCCGTGTCAT",1,6.41,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L5N K56W A89F T100I",4
"lib1","SARS-CoV-2","TCCTTTTCCTTTCGAC",2,59.09,9.95,-0.82,0.11,2.34,1.1,0.01,">1 nonsynonymous","N1T D34G S129R",3
"lib1","SARS-CoV-2","TCCTTTTGCCTTTAAC",3,9.68,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T15M V103L Y121T",3
"lib1","SARS-CoV-2","TCCTTTTTAGTGTCAC",2,15.36,10.76,0,0.06,2.91,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAAAAAAAAACACA",6,90.98,6,-4.76,1.89,1.5,1.27,0.02,"1 nonsynonymous","I72Y",1
"lib1","SARS-CoV-2","TCGAAAAACCTTACCA",2,39.5,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A18L Y50M L125F I138W",4
"lib1","SARS-CoV-2","TCGAAAACCTTGACAT",3,0.2,NA,NA,NA,NA,NA,NA,"stop","R16N T140*",2
"lib1","SARS-CoV-2","TCGAAAAGAGGACGTA",5,63.43,10.57,-0.19,0.09,2.95,1.04,0,"1 nonsynonymous","K199N",1
"lib1","SARS-CoV-2","TCGAAAAGGCTTAAAA",7,38.84,9.85,-0.91,0.07,2.16,1,0,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TCGAAACCAATCAATC",1,12.06,10.79,0.03,0.13,2.94,1.06,0.01,">1 nonsynonymous","N64T K132S",2
"lib1","SARS-CoV-2","TCGAAACCTTCAGATT",3,24.36,9.11,-1.66,0.11,2.83,1.11,0.01,">1 nonsynonymous","C61K Q168L",2
"lib1","SARS-CoV-2","TCGAAACTGTAACGAG",9,167.38,10.74,-0.03,0.07,2.89,1.08,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","TCGAAACTGTCGCGAT",2,51.72,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F12Y Y50V S129G",3
"lib1","SARS-CoV-2","TCGAAAGCAAAAATCA",7,29.31,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","C102G V180I",2
"lib1","SARS-CoV-2","TCGAAAGCAGCATAGT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","G9A A89T D98W E141L N151T C158Y Q163*",7
"lib1","SARS-CoV-2","TCGAAAGGAATAGAAA",2,41.4,10.9,0.13,0.1,2.9,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAAAGTACAAATAC",2,56.52,10.79,0.02,0.08,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAAAGTTTTGATGG",3,28.16,8.64,-2.13,0.35,1.5,1,0.06,">1 nonsynonymous","Q84L I104L S113Y",3
"lib1","SARS-CoV-2","TCGAAATAACTCATGG",5,67.71,9.24,-1.52,0.12,1.92,1.18,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TCGAAATACAAGTTAG",5,35.4,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","A42E A81S A89L I138K",4
"lib1","SARS-CoV-2","TCGAAATACATGTTGA",2,42.93,10.03,-0.73,0.12,2.41,1.1,0.01,"1 nonsynonymous","N30V",1
"lib1","SARS-CoV-2","TCGAAATAGAATGAAT",4,32.21,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Y35S L60Q Q79L N92Y E135M G155P",6
"lib1","SARS-CoV-2","TCGAAATATTATCTTA",4,115.5,10.7,-0.07,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAAATCCATATTTT",3,0.61,NA,NA,NA,NA,NA,NA,"stop","N110I P191I K199*",3
"lib1","SARS-CoV-2","TCGAAATCCCTGATGG",1,65.01,10.72,-0.04,0.07,2.85,1.02,0,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","TCGAAATGCCAGCCGT",5,175.64,10.82,0.06,0.07,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAAATTATTTGTGA",6,78.59,10.09,-0.67,0.08,2.63,1.04,0,">1 nonsynonymous","N30K V37P S129C",3
"lib1","SARS-CoV-2","TCGAAATTCCAAAGTA",2,21.01,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","Y66H E76A D112N",3
"lib1","SARS-CoV-2","TCGAAATTCGCAATAA",5,54.52,10.61,-0.15,0.07,2.91,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TCGAAATTTGCGACCA",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62P L122Q R136D",3
"lib1","SARS-CoV-2","TCGAACAAAGACCCCA",3,50.81,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F47A P161I",2
"lib1","SARS-CoV-2","TCGAACAACCGTAGCG",1,91.19,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","P177W",1
"lib1","SARS-CoV-2","TCGAACAAGTTCTCTG",6,32.64,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F62K V77A L111A G172Y",4
"lib1","SARS-CoV-2","TCGAACAATTGCCTCA",1,0.21,NA,NA,NA,NA,NA,NA,"stop","E10K K26V T46D L57M V77T G116*",6
"lib1","SARS-CoV-2","TCGAACAGCCTAAAAC",2,11.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63R Y119L E135Y",3
"lib1","SARS-CoV-2","TCGAACAGCGATATCG",3,32.25,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14K W23A T85G L95R",4
"lib1","SARS-CoV-2","TCGAACATACACAGGT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","A33V T63* Y93D L131K T170I",5
"lib1","SARS-CoV-2","TCGAACATCGCGCGCT",6,90.85,6,-4.76,0.64,1.98,1.16,0.01,">1 nonsynonymous","V37T N107L L122T K128Y P149C",5
"lib1","SARS-CoV-2","TCGAACATTATAGCAA",5,21.31,9.3,-1.46,0.2,1.58,1.11,0.02,">1 nonsynonymous","P96V T140M",2
"lib1","SARS-CoV-2","TCGAACATTGTCCAAT",3,2.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172N",1
"lib1","SARS-CoV-2","TCGAACGAACAAGACG",1,0.43,NA,NA,NA,NA,NA,NA,"stop","F44N C150* S200L",3
"lib1","SARS-CoV-2","TCGAACGCGACTCCAA",8,71.67,8.51,-2.25,0.11,2.4,1.09,0,">1 nonsynonymous","T15V S129E F167W T201R",4
"lib1","SARS-CoV-2","TCGAACGGTTAATTCG",15,212.1,10.7,-0.06,0.04,2.93,1.03,0,">1 nonsynonymous","I2F S41M T201L",3
"lib1","SARS-CoV-2","TCGAACGTTACTCGCC",10,142.46,10.63,-0.13,0.03,2.95,1.02,0,"1 nonsynonymous","G155T",1
"lib1","SARS-CoV-2","TCGAACGTTCTTTCAG",4,25.95,10.78,0.01,0.06,2.85,1.06,0,"1 nonsynonymous","D97I",1
"lib1","SARS-CoV-2","TCGAACTAGTGATTAA",2,19.34,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","N64S V77R K94I N130Y",4
"lib1","SARS-CoV-2","TCGAACTATCGAGGCG",1,44.78,8.52,-2.24,0.13,2.37,1.13,0.01,">1 nonsynonymous","Y35E T55G A145L",3
"lib1","SARS-CoV-2","TCGAACTCAATACCAC",5,29.34,6.1,-4.67,0.76,1.83,1.2,0.03,">1 nonsynonymous","F12D L57F G83H",3
"lib1","SARS-CoV-2","TCGAACTTTAAGACAT",1,1.48,NA,NA,NA,NA,NA,NA,"stop","N4C R25* K87V S113T G152S A192M",6
"lib1","SARS-CoV-2","TCGAAGAAGATTTAAA",2,10.69,8.26,-2.51,0.41,1.6,1.15,0.06,">1 nonsynonymous","Y35S T46A N58S Y119D P149H",5
"lib1","SARS-CoV-2","TCGAAGACAAAGAAAC",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V F99V E141V F156M",4
"lib1","SARS-CoV-2","TCGAAGACAATTCGAC",1,36.34,6.05,-4.71,1.9,1.5,1.26,0.07,">1 nonsynonymous","N120C F156V Q176W T201L",4
"lib1","SARS-CoV-2","TCGAAGAGTAACTACC",8,57.37,10.78,0.02,0.07,2.98,1.02,0,">1 nonsynonymous","N110H K132Q",2
"lib1","SARS-CoV-2","TCGAAGATGAACTAAA",2,9.7,8.54,-2.22,0.29,1.5,1,0.03,">1 nonsynonymous","N1W N58C G83F P96S",4
"lib1","SARS-CoV-2","TCGAAGCGTGAATCTA",3,5.87,NA,NA,NA,NA,NA,NA,"stop","G9V K48P N92* Y119* P149K",5
"lib1","SARS-CoV-2","TCGAAGGACCTCCTAT",9,72.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D G51P N64T",3
"lib1","SARS-CoV-2","TCGAAGGCGTATTAGT",3,16.24,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R127V G172R",2
"lib1","SARS-CoV-2","TCGAAGTTTTCACGAA",3,81.03,8.74,-2.02,0.12,1.9,1.15,0.01,">1 nonsynonymous","L38S P169N P197S",3
"lib1","SARS-CoV-2","TCGAATAAAATTGGCG",1,39.46,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","L5S N40S Y119R S129W Y175L",5
"lib1","SARS-CoV-2","TCGAATAATAGCCCCT",8,54.28,9.9,-0.86,0.11,2.66,1.03,0,">1 nonsynonymous","F44T D75N P149H",3
"lib1","SARS-CoV-2","TCGAATAATTTCTAAA",3,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86K G155D",2
"lib1","SARS-CoV-2","TCGAATACGCATGAAA",3,47.37,10.34,-0.42,0.03,2.94,1,0,">1 nonsynonymous","K48R L60I P96S",3
"lib1","SARS-CoV-2","TCGAATACTTGCTTCC",1,0.26,NA,NA,NA,NA,NA,NA,"stop","V20M F167P K199*",3
"lib1","SARS-CoV-2","TCGAATATACGTGGAG",7,66.91,10.19,-0.58,0.05,2.85,1.02,0,">1 nonsynonymous","N107P L122I",2
"lib1","SARS-CoV-2","TCGAATATTGAAACTA",2,5.42,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","V37G P82V P96I N118S",4
"lib1","SARS-CoV-2","TCGAATATTTGGTCAG",3,56.21,10.75,-0.01,0.07,2.83,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCGAATCATCCAGAAA",3,12.84,6,-4.76,2,2.06,1.21,0.02,">1 nonsynonymous","W23P C49F P133L A145E",4
"lib1","SARS-CoV-2","TCGAATCCTCAATGGT",5,56.39,10.46,-0.31,0.04,2.95,1.02,0,">1 nonsynonymous","V37E T63F K199L",3
"lib1","SARS-CoV-2","TCGAATCGGCGAGTAC",3,38.02,10.63,-0.13,0.06,2.81,1.08,0,">1 nonsynonymous","S45H V115Q",2
"lib1","SARS-CoV-2","TCGAATCTAATAGAGC",5,9.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M K94W T100R A105L",4
"lib1","SARS-CoV-2","TCGAATCTTACGCGGA",5,91.42,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S36N Y119L N157P V180L",4
"lib1","SARS-CoV-2","TCGAATGAGTCTAATA",9,0.54,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","TCGAATGCGAAGGCCG",3,21.01,10.78,0.01,0.06,2.89,1.06,0,"1 nonsynonymous","L38I",1
"lib1","SARS-CoV-2","TCGAATGGTTGCGAAA",4,59.37,9.96,-0.8,0.08,2.11,1.02,0,">1 nonsynonymous","S36F A105G",2
"lib1","SARS-CoV-2","TCGAATGTAGAGTAGA",3,28.34,6,-4.76,1.12,1.5,1.24,0.02,">1 nonsynonymous","Q84H G86R H189S",3
"lib1","SARS-CoV-2","TCGAATGTCGCACTTG",4,66.71,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K26Q K87N Y91N S147C R179M A190H",6
"lib1","SARS-CoV-2","TCGAATTGTACACTAA",2,13.69,7.72,-3.04,0.41,1.5,1,0.05,">1 nonsynonymous","S113P V182P",2
"lib1","SARS-CoV-2","TCGAATTGTCGGATAG",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L H189L",2
"lib1","SARS-CoV-2","TCGAATTGTTACAAAA",4,32.65,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A33P D112R",2
"lib1","SARS-CoV-2","TCGAATTTCTTGACGT",6,31.46,9.89,-0.87,0.1,2.88,1,0,">1 nonsynonymous","N64L Q168T",2
"lib1","SARS-CoV-2","TCGAATTTTTAAAAAC",2,11.24,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","A14S N92D N118F",3
"lib1","SARS-CoV-2","TCGACAAAAGATGTAT",6,83.36,6.28,-4.49,0.25,1.73,1.1,0,">1 nonsynonymous","N4S F47W L111T S139I F167V",5
"lib1","SARS-CoV-2","TCGACAAACTACCGTG",2,26.32,10.43,-0.33,0.07,2.78,1.07,0,">1 nonsynonymous","P54H N64I G152K",3
"lib1","SARS-CoV-2","TCGACAAAGGCACCGT",6,31.06,7.44,-3.33,0.36,1.5,1.03,0.06,">1 nonsynonymous","L60I D90L P177R",3
"lib1","SARS-CoV-2","TCGACAAATTCGCTGT",1,23.4,8.27,-2.49,0.25,1.7,1.17,0.02,">1 nonsynonymous","T63A G155L Y178C",3
"lib1","SARS-CoV-2","TCGACAACCCCTTCTA",5,69.47,10.82,0.05,0.15,2.81,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCGACAATTGTGTATA",1,56.8,10.8,0.04,0.07,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TCGACACCCTTTGGAA",6,40.09,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","L95R",1
"lib1","SARS-CoV-2","TCGACACGCGACACAA",1,50.29,9.95,-0.82,0.06,2.76,1.07,0,">1 nonsynonymous","K114S G155L",2
"lib1","SARS-CoV-2","TCGACACGTCAAGTTC",1,40.89,10.62,-0.14,0.06,2.91,1.04,0,"1 nonsynonymous","K48M",1
"lib1","SARS-CoV-2","TCGACAGAAAATATAT",2,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N C61S A89T Y123F",4
"lib1","SARS-CoV-2","TCGACAGTTGAACAAG",2,24.21,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","Y35L V52I N64H K94E R124L C158G V181A",7
"lib1","SARS-CoV-2","TCGACATAAGACGATA",5,1116.03,10.65,-0.12,0.04,2.92,1.05,0,">1 nonsynonymous","I104L N171Q",2
"lib1","SARS-CoV-2","TCGACATACTGTCACC",7,82.89,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F12N V37C G101S P177N",4
"lib1","SARS-CoV-2","TCGACATATCGGCTCA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","L60* F160R",2
"lib1","SARS-CoV-2","TCGACATCTACTACAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib1","SARS-CoV-2","TCGACATGACGCTCCG",3,38.76,10.84,0.08,0.1,2.9,1.04,0,">1 nonsynonymous","S41T P54R N130A",3
"lib1","SARS-CoV-2","TCGACCACCGCGCAAG",5,35.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S D98L Y121G Q176R",4
"lib1","SARS-CoV-2","TCGACCACTATAAGGG",2,6.47,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V32S",1
"lib1","SARS-CoV-2","TCGACCAGCTTCAGAA",7,5.86,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","D68E G101S Y143L",3
"lib1","SARS-CoV-2","TCGACCATAGAATGAG",1,148.95,10.71,-0.05,0.05,2.86,1.08,0,">1 nonsynonymous","L5N P149E K199F",3
"lib1","SARS-CoV-2","TCGACCCCTGACTAGA",5,34.86,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","Y93W Y123L Y143E Y159S",4
"lib1","SARS-CoV-2","TCGACCGACCTATGTA",7,63.28,6,-4.76,0.99,1.5,1.13,0.01,">1 nonsynonymous","P54G P161I",2
"lib1","SARS-CoV-2","TCGACCGTTCCCGTTA",7,65.04,10.71,-0.05,0.06,2.9,1.07,0,"1 nonsynonymous","N1Q",1
"lib1","SARS-CoV-2","TCGACCGTTTGGTAGT",6,161.2,10.5,-0.26,0.03,2.92,1.02,0,">1 nonsynonymous","S41L G155K",2
"lib1","SARS-CoV-2","TCGACCTACGAATTGA",4,38.2,10.71,-0.05,0.06,3,1.01,0,">1 nonsynonymous","L5I T201N",2
"lib1","SARS-CoV-2","TCGACGACCCATAGAT",3,0.56,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib1","SARS-CoV-2","TCGACGATCTGGATTA",1,8.78,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","R127V C158V Y165A",3
"lib1","SARS-CoV-2","TCGACTATACAGTGAT",3,51.3,10.63,-0.14,0.06,2.91,1.02,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","TCGACTATCAATGAGG",7,114.42,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V103I E141W L162N",3
"lib1","SARS-CoV-2","TCGACTATCCATCATA",6,57.53,8.95,-1.81,0.19,1.59,1.15,0.02,">1 nonsynonymous","F12A T55Q Y123S G152Q V173K",5
"lib1","SARS-CoV-2","TCGACTCTGTAAATCG",3,57.54,10.42,-0.34,0.05,2.91,1.04,0,">1 nonsynonymous","Y121N P197T",2
"lib1","SARS-CoV-2","TCGACTCTTTTTAAAC",1,50.86,10.05,-0.71,0.09,2.53,1.05,0,">1 nonsynonymous","D34I L122F",2
"lib1","SARS-CoV-2","TCGACTGGCATTGCCA",5,68.79,8.21,-2.55,0.21,1.58,1.15,0.02,">1 nonsynonymous","T55L V77L Q84L L125Y C195F",5
"lib1","SARS-CoV-2","TCGACTGTATGCCACC",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36P L95Q K128V E186I",4
"lib1","SARS-CoV-2","TCGACTTACCACAAAA",1,20.14,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","N30L S45N N64I P82V",4
"lib1","SARS-CoV-2","TCGACTTAGAGTCGGA",3,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y F17W T63N I72T Y119V",5
"lib1","SARS-CoV-2","TCGACTTGTTAACGAT",1,21.33,9.17,-1.59,0.12,2.96,1.04,0.01,">1 nonsynonymous","A42T Y119M",2
"lib1","SARS-CoV-2","TCGACTTTGACATGGG",8,1.22,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib1","SARS-CoV-2","TCGACTTTTGCGTAAT",3,23.98,10.66,-0.11,0.11,2.9,1.09,0,"1 nonsynonymous","K48D",1
"lib1","SARS-CoV-2","TCGAGAAAATACATTA",3,21.19,7.29,-3.48,0.39,1.5,1,0.06,">1 nonsynonymous","S41V A67F S129E G146E G152F F167L",6
"lib1","SARS-CoV-2","TCGAGAAAGTGGCTAA",3,99.77,10.78,0.02,0.05,2.93,1.03,0,">1 nonsynonymous","G9S K128A",2
"lib1","SARS-CoV-2","TCGAGAACCGAAAATT",1,32.2,9.67,-1.1,0.12,2.65,1.06,0.01,">1 nonsynonymous","K87S E135C Q168A",3
"lib1","SARS-CoV-2","TCGAGAATAGTACGGC",5,45.6,8.61,-2.16,0.11,2.47,1.14,0.01,">1 nonsynonymous","P7L S113C",2
"lib1","SARS-CoV-2","TCGAGAATCGCCACCC",1,89.65,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y143R Y178L",2
"lib1","SARS-CoV-2","TCGAGACAGCTCGCCG",2,31.81,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A22V S69M E141H T170K",4
"lib1","SARS-CoV-2","TCGAGACCGTACGGGT",1,6.66,10.8,0.04,0.09,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGAGACTTATCTGTT",3,17.02,6,-4.76,1.47,1.53,1.1,0,">1 nonsynonymous","I2S T15F R179M",3
"lib1","SARS-CoV-2","TCGAGAGATGAATATA",2,67.09,7.12,-3.64,0.19,1.6,1.14,0.01,">1 nonsynonymous","I2Y C61T Y175I",3
"lib1","SARS-CoV-2","TCGAGAGGTAGACTTG",2,8.04,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","S41I I88N G101T",3
"lib1","SARS-CoV-2","TCGAGAGTTCCGAATA",4,3.62,NA,NA,NA,NA,NA,NA,"stop","E10C S19* G51L Y119V R136D E141F",6
"lib1","SARS-CoV-2","TCGAGATCTCAGGCTT",5,34.7,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","G51V D90N F126L Q168P",4
"lib1","SARS-CoV-2","TCGAGATGTAAGTGTA",6,28.58,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38S T55D G86Q C158G",4
"lib1","SARS-CoV-2","TCGAGATTACGAGGGA",11,71.97,8.1,-2.66,0.33,1.5,1,0.05,">1 nonsynonymous","Y50I G146R P149C S200F",4
"lib1","SARS-CoV-2","TCGAGCAACCCCCTGA",1,27.88,9.92,-0.84,0.06,2.67,1.06,0,"1 nonsynonymous","F99L",1
"lib1","SARS-CoV-2","TCGAGCACCAGCATAC",1,47.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G51A G146A Y159C",3
"lib1","SARS-CoV-2","TCGAGCCCTTATACGG",1,16.77,10.56,-0.2,0.05,3,1,0,"1 nonsynonymous","I104C",1
"lib1","SARS-CoV-2","TCGAGCCCTTATAGGC",12,59.6,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","R27N F44P I88K G101C N171K",5
"lib1","SARS-CoV-2","TCGAGCGCCCGTCCGC",10,119.21,8.51,-2.25,0.1,2.97,1.03,0,">1 nonsynonymous","Y119L F126V T201M",3
"lib1","SARS-CoV-2","TCGAGCGGGTTCCACT",2,86.07,10.02,-0.75,0.09,2.51,1.05,0,"1 nonsynonymous","N13C",1
"lib1","SARS-CoV-2","TCGAGCGGTGTCAATA",2,33.24,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P96R R136L Q163W",3
"lib1","SARS-CoV-2","TCGAGCTATGTCTTAA",1,8.25,6.19,-4.58,0.96,3,1.14,0.02,">1 nonsynonymous","P7K L95M C102Y",3
"lib1","SARS-CoV-2","TCGAGGAATGGGCCCT",2,15.27,9.33,-1.44,0.22,1.93,1.18,0.02,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TCGAGTCAGGCCACGA",3,25.2,10.63,-0.13,0.08,2.89,1.07,0,">1 nonsynonymous","N24R Y39M D75Y",3
"lib1","SARS-CoV-2","TCGAGTCATATTACGC",2,19.33,10.53,-0.24,0.06,2.91,1.03,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","TCGAGTGATAGTATAT",6,42.36,6,-4.76,1.26,1.5,1.24,0.03,">1 nonsynonymous","F47T F70Y P96H",3
"lib1","SARS-CoV-2","TCGAGTGTATGATCAA",9,80.78,7.92,-2.85,0.36,1.5,1,0.04,">1 nonsynonymous","R127S E135V Y165W K199M",4
"lib1","SARS-CoV-2","TCGAGTTAAACACATC",14,110.64,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G101V N107A G146L",3
"lib1","SARS-CoV-2","TCGAGTTTCGCCAACC",4,20.57,6.67,-4.1,0.63,1.5,1.18,0.04,">1 nonsynonymous","C49S K94R",2
"lib1","SARS-CoV-2","TCGATAAAGAAAAACA",1,51,7.66,-3.11,0.15,1.65,1.15,0.01,">1 nonsynonymous","Q84N N151M Y175C T201G",4
"lib1","SARS-CoV-2","TCGATAACCCTAACGA",9,108.3,9.83,-0.93,0.12,1.91,1.09,0.01,">1 nonsynonymous","G9M W106A",2
"lib1","SARS-CoV-2","TCGATAAGCGTGTTGA",6,65.41,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6K Y50C G117V",3
"lib1","SARS-CoV-2","TCGATAATAAGAACTG",8,55.01,8.71,-2.06,0.22,1.5,1.01,0.02,">1 nonsynonymous","P96R I138P",2
"lib1","SARS-CoV-2","TCGATAATAAGGCGCT",1,13.8,6.88,-3.88,0.53,1.5,1.39,0.05,"1 nonsynonymous","A89D",1
"lib1","SARS-CoV-2","TCGATAATACTCTACA",1,5.5,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","V71E G116N R124Y F185N",4
"lib1","SARS-CoV-2","TCGATAATCTCATTAT",1,22.08,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19L F70L K132E F185P",4
"lib1","SARS-CoV-2","TCGATACACCAATAGA",2,12.36,6.19,-4.57,0.8,1.5,1.12,0.04,">1 nonsynonymous","S41K T55W K114T Y121Q T170V",5
"lib1","SARS-CoV-2","TCGATACAGATATCAA",5,36.4,6,-4.76,0.51,3,1.05,0,">1 nonsynonymous","I142V F167G F185E",3
"lib1","SARS-CoV-2","TCGATACATGTTTTCA",2,47.55,10.27,-0.5,0.06,2.77,1,0,">1 nonsynonymous","D34P T100M",2
"lib1","SARS-CoV-2","TCGATACCAAGAACAC",1,10.19,10.74,-0.03,0.08,2.85,1.16,0,">1 nonsynonymous","Y39M D59M N151Q",3
"lib1","SARS-CoV-2","TCGATACCTAGCAACA",7,92.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F70W A81V T85A R124T N151I N157F K199N",7
"lib1","SARS-CoV-2","TCGATACGAATGTGGT",16,157.67,10.7,-0.07,0.04,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGATAGACAAATTAT",2,86.68,8.97,-1.8,0.06,2.85,1.08,0,">1 nonsynonymous","I138R F160S T170E T201W",4
"lib1","SARS-CoV-2","TCGATAGACTAAGGCG",4,87.93,10.61,-0.15,0.04,2.95,1,0,">1 nonsynonymous","D59M Y66F",2
"lib1","SARS-CoV-2","TCGATAGACTATTTTA",1,14.78,8.37,-2.39,0.15,2.34,1.19,0.01,">1 nonsynonymous","N109T S184E",2
"lib1","SARS-CoV-2","TCGATAGAGACCCAAT",4,1.86,NA,NA,NA,NA,NA,NA,"stop","L122* E154Y",2
"lib1","SARS-CoV-2","TCGATAGAGGCCGAAT",6,81.8,10.78,0.02,0.05,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCGATAGATAAGTCTA",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y P96C A105H",3
"lib1","SARS-CoV-2","TCGATAGCAACTGACA",3,47.79,9.5,-1.27,0.1,2.22,1.1,0,">1 nonsynonymous","L5F N118M P149Y",3
"lib1","SARS-CoV-2","TCGATAGGACCCCACA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","A67T Y91* L122H",3
"lib1","SARS-CoV-2","TCGATAGTATCAACGG",3,59.53,6.6,-4.16,0.48,1.5,1.1,0.03,">1 nonsynonymous","D59S C150W T170E",3
"lib1","SARS-CoV-2","TCGATAGTCCGTACGT",2,6.03,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23S Y50D L125G",3
"lib1","SARS-CoV-2","TCGATATAAGCAAAGT",4,46.14,8.06,-2.71,0.38,1.5,1.07,0.07,">1 nonsynonymous","N130M Y143S P149T N171S",4
"lib1","SARS-CoV-2","TCGATATACCTGAGAC",3,24.1,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","S19K I104R",2
"lib1","SARS-CoV-2","TCGATATGTCTCCACT",3,53.18,9.45,-1.31,0.1,1.97,1.1,0,">1 nonsynonymous","F8A K87H V103I",3
"lib1","SARS-CoV-2","TCGATATTTTCAACAA",2,25.86,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","L57S Y93S",2
"lib1","SARS-CoV-2","TCGATCCAAAATAAAG",2,8.84,6,-4.76,2,3,1.06,0,">1 nonsynonymous","G51V K114S V180L",3
"lib1","SARS-CoV-2","TCGATCCTCCACAGCC",4,16.16,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T3R L57R T85P R136L G172H",5
"lib1","SARS-CoV-2","TCGATCGCCCAGAAAC",9,139.55,10.78,0.02,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGATCTAATTGGCTT",1,8.57,6.84,-3.92,0.46,1.5,1.07,0.04,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","TCGATGAAAGCCTAAA",6,22.74,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","S41A Y93W V103E",3
"lib1","SARS-CoV-2","TCGATGAACAATTGCA",2,88.18,9.77,-0.99,0.06,2.86,1.08,0,"1 nonsynonymous","Y119F",1
"lib1","SARS-CoV-2","TCGATGAGGAAGTAGG",6,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V R73G C158W",3
"lib1","SARS-CoV-2","TCGATGATAGGTCTGT",1,12.96,10.26,-0.5,0.1,2.81,1.14,0,">1 nonsynonymous","Y121F S147K",2
"lib1","SARS-CoV-2","TCGATGGCCAAACACA",5,67.84,9.73,-1.03,0.04,2.93,1.04,0,"1 nonsynonymous","Y119N",1
"lib1","SARS-CoV-2","TCGATGGGTGTTATAT",13,150.27,10.26,-0.5,0.05,2.83,1.03,0,">1 nonsynonymous","S129I E141P",2
"lib1","SARS-CoV-2","TCGATGGTTCAATAGA",1,56.68,10.01,-0.76,0.06,2.93,1.01,0,"1 nonsynonymous","P169D",1
"lib1","SARS-CoV-2","TCGATGTTTAGAGCGA",8,3.46,NA,NA,NA,NA,NA,NA,"stop","S45Y T100M G172E T201*",4
"lib1","SARS-CoV-2","TCGATTAATATGCAGC",4,26,7.07,-3.69,0.38,1.5,1.22,0.04,">1 nonsynonymous","C49S S147I",2
"lib1","SARS-CoV-2","TCGATTAATTCACAGG",3,29.51,6.27,-4.49,0.85,1.5,1.2,0.04,">1 nonsynonymous","S45A D112S L122W",3
"lib1","SARS-CoV-2","TCGATTACAACTTTTC",6,6.86,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14L R25T A42F V52I P161A T201Q",6
"lib1","SARS-CoV-2","TCGATTAGCTTGCATA",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R A33S T201L",3
"lib1","SARS-CoV-2","TCGATTATGAGGAGAG",3,134.57,10.56,-0.21,0.04,2.93,1.01,0,">1 nonsynonymous","Y35M K56R D97V L111F",4
"lib1","SARS-CoV-2","TCGATTATTTGACCGA",1,15.35,8.9,-1.87,0.24,1.5,1.07,0.02,">1 nonsynonymous","L5V L183T",2
"lib1","SARS-CoV-2","TCGATTCTAAACACTT",6,159.13,10.38,-0.38,0.07,2.79,1.03,0,">1 nonsynonymous","N40C D59E",2
"lib1","SARS-CoV-2","TCGATTCTCTGAGTCT",1,15.52,10.08,-0.69,0.18,2.5,1,0.01,">1 nonsynonymous","L60N E186I",2
"lib1","SARS-CoV-2","TCGATTGCGAATACAG",1,12.01,6.12,-4.64,1.01,1.5,1.09,0.05,">1 nonsynonymous","Y50D F99S",2
"lib1","SARS-CoV-2","TCGATTTAACCACACT",2,80.68,10.75,-0.02,0.1,2.89,1.06,0,"1 nonsynonymous","V37P",1
"lib1","SARS-CoV-2","TCGATTTTGATCAGGA",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I F62L",2
"lib1","SARS-CoV-2","TCGCAAAACAACTATC",3,64.56,9.83,-0.94,0.05,2.83,1.05,0,">1 nonsynonymous","F62W Q84R V115M G174W",4
"lib1","SARS-CoV-2","TCGCAAAACAGGGTTT",2,4.52,NA,NA,NA,NA,NA,NA,"stop","T3M A22T L38* N58M V103E N157E",6
"lib1","SARS-CoV-2","TCGCAAAACCTAGCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","L60V G101*",2
"lib1","SARS-CoV-2","TCGCAAAAGAAGCAAT",5,81.38,10.8,0.03,0.07,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCAAAAGGGTATTA",4,38.49,7.48,-3.29,0.28,1.5,1.04,0.02,">1 nonsynonymous","L38S C49L",2
"lib1","SARS-CoV-2","TCGCAAACATTTAATG",7,14.65,6,-4.76,2,1.5,1.1,0.05,">1 nonsynonymous","C6V C61I L183S",3
"lib1","SARS-CoV-2","TCGCAAACCGCCGAAC",1,15.27,10.76,0,0.05,2.86,1.07,0,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","TCGCAAAGGAAAAACC",1,36.18,8.67,-2.09,0.1,2.81,1.06,0,">1 nonsynonymous","S41F G117R E141T",3
"lib1","SARS-CoV-2","TCGCAAAGTGATTTCA",5,1.67,NA,NA,NA,NA,NA,NA,"stop","A42N P149* C158N",3
"lib1","SARS-CoV-2","TCGCAACCAACTACCA",6,18.61,9.82,-0.94,0.28,1.5,1,0.04,">1 nonsynonymous","F99I K132W",2
"lib1","SARS-CoV-2","TCGCAACCCCCTCCCA",2,10.79,8.54,-2.23,0.19,2.71,1.23,0.01,">1 nonsynonymous","G166F V173I",2
"lib1","SARS-CoV-2","TCGCAACGTTGGGCCG",5,0.55,NA,NA,NA,NA,NA,NA,"stop","F47Y Y143*",2
"lib1","SARS-CoV-2","TCGCAACTACAGCAGC",3,42.57,6.68,-4.09,0.26,1.5,1.14,0.01,">1 nonsynonymous","N40D P133Q L162T",3
"lib1","SARS-CoV-2","TCGCAACTTAGAAAAT",4,88.16,10.67,-0.1,0.04,2.97,1.01,0,">1 nonsynonymous","P7R Y66V",2
"lib1","SARS-CoV-2","TCGCAAGAACCATGGG",7,65.19,9.05,-1.72,0.11,2.75,1.12,0,">1 nonsynonymous","S29V Y119D P149L",3
"lib1","SARS-CoV-2","TCGCAAGATTAGTGAA",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108F N120C",2
"lib1","SARS-CoV-2","TCGCAAGCAAAATATA",3,13.05,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F44Y V71M N120P Y143V",4
"lib1","SARS-CoV-2","TCGCAAGTGAATGACC",4,97.37,10.66,-0.1,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCAATACCAGAGGT",2,18.3,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19M V37M C49R V65Y F156L",5
"lib1","SARS-CoV-2","TCGCAATATGATATCA",1,14.37,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","S45A Y91M C158V",3
"lib1","SARS-CoV-2","TCGCAATTTGCATATC",6,91.31,10.79,0.03,0.08,2.95,1.03,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","TCGCACAAAAGCCCCA",3,45.82,9.6,-1.17,0.18,2.08,1.15,0.01,"1 nonsynonymous","D112V",1
"lib1","SARS-CoV-2","TCGCACAAGGTAGCAA",7,68.72,9.84,-0.93,0.06,2.23,1.02,0,">1 nonsynonymous","T3D N4K L38A",3
"lib1","SARS-CoV-2","TCGCACAATATAAATC",1,42.87,10.64,-0.13,0.04,2.86,1.09,0,"1 nonsynonymous","P191I",1
"lib1","SARS-CoV-2","TCGCACACGCCTTCAA",1,27.5,10.91,0.15,0.07,2.9,1.05,0,"1 nonsynonymous","K128A",1
"lib1","SARS-CoV-2","TCGCACAGGCCTTAGA",3,31.21,9.24,-1.53,0.13,2.01,1.21,0.01,">1 nonsynonymous","N107V S129G",2
"lib1","SARS-CoV-2","TCGCACATTTCATACT",4,26.59,10.32,-0.44,0.11,2.72,1.11,0.01,">1 nonsynonymous","A18K Y66L",2
"lib1","SARS-CoV-2","TCGCACCAGTAAAGCC",3,82.16,10.76,0,0.05,3,1,0,"1 nonsynonymous","T55P",1
"lib1","SARS-CoV-2","TCGCACCCATACCGCG",4,5.31,NA,NA,NA,NA,NA,NA,"stop","L5R G83V A89* T170R",4
"lib1","SARS-CoV-2","TCGCACCGATATAAAA",4,16.05,7.57,-3.2,0.23,2,1.11,0.02,">1 nonsynonymous","R25G P54A C61K",3
"lib1","SARS-CoV-2","TCGCACGATTCATTAT",4,2.38,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib1","SARS-CoV-2","TCGCACGGAGTTTCAC",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H F99K W106V G117R C158M",5
"lib1","SARS-CoV-2","TCGCACGGTTCTCCCC",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G T15I G146I E154L P197T",5
"lib1","SARS-CoV-2","TCGCACTGTACATCCT",4,47.35,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N40C T85M N118Q R124H",4
"lib1","SARS-CoV-2","TCGCACTTTAATACAA",2,6.9,6,-4.76,0.84,1.5,1.02,0.01,">1 nonsynonymous","G86Q S113I R124A F167Y",4
"lib1","SARS-CoV-2","TCGCAGAAGGTTTTCA",11,1.13,NA,NA,NA,NA,NA,NA,"stop","R16F N118E S139N G146*",4
"lib1","SARS-CoV-2","TCGCAGAATGGTCCTT",1,15.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I104F Y143D F167L",3
"lib1","SARS-CoV-2","TCGCAGCACAGATCGA",3,12.54,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y35N D59A R73Y I88R L183A",5
"lib1","SARS-CoV-2","TCGCAGCAGAACATAC",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S F70K Q144P T170V",4
"lib1","SARS-CoV-2","TCGCAGCCAGGAACAC",4,45.77,10.79,0.03,0.05,2.89,1.07,0,"1 nonsynonymous","I2E",1
"lib1","SARS-CoV-2","TCGCAGCTGCCACTAT",1,17.75,10.31,-0.45,0.08,2.84,1.09,0.01,">1 nonsynonymous","A42V K48S C61H Q168R",4
"lib1","SARS-CoV-2","TCGCAGGAGATAAAAA",6,157.08,10.79,0.02,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCAGGGAATAAAAT",2,14.92,6,-4.76,0.4,3,1.06,0,">1 nonsynonymous","S113I E154F",2
"lib1","SARS-CoV-2","TCGCAGGGTCGCGATA",2,53.09,10.6,-0.16,0.03,2.89,1.08,0,">1 nonsynonymous","S139L P149D P197M",3
"lib1","SARS-CoV-2","TCGCAGGTAGGTTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","V65E S129* E135R P149R T201I",5
"lib1","SARS-CoV-2","TCGCAGGTGTGGAGTC",2,75.47,10.11,-0.66,0.1,2.26,1.08,0,">1 nonsynonymous","N4R G9V R136V",3
"lib1","SARS-CoV-2","TCGCAGTCCACATCAA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","Y35T D90* N120Q S139L F156L R179W",6
"lib1","SARS-CoV-2","TCGCAGTTTGCACGAT",1,9.04,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S43C D68E Y91M G116S L188E",5
"lib1","SARS-CoV-2","TCGCATAAACTCTACA",1,1.32,NA,NA,NA,NA,NA,NA,"stop","T3L S36* C61R K114*",4
"lib1","SARS-CoV-2","TCGCATAAATACGCGT",1,24.47,9.38,-1.38,0.11,2.79,1.12,0.01,">1 nonsynonymous","D98E L122M P169E",3
"lib1","SARS-CoV-2","TCGCATAACATAACTC",3,77.94,10.35,-0.42,0.06,2.9,1.01,0,"1 nonsynonymous","T15M",1
"lib1","SARS-CoV-2","TCGCATAATAAATAGG",4,103.16,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38E N58S N107L I138R",4
"lib1","SARS-CoV-2","TCGCATACATGGTATT",6,68.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N107M Q144S C158D",3
"lib1","SARS-CoV-2","TCGCATACATGTAACA",5,89.43,10.47,-0.3,0.07,2.82,1.04,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","TCGCATACTATAAACA",3,219.06,8.33,-2.43,0.23,1.57,1.13,0.02,">1 nonsynonymous","D97K Y165S V173R",3
"lib1","SARS-CoV-2","TCGCATAGTCATCACC",10,175.64,10.1,-0.66,0.04,2.87,1.04,0,">1 nonsynonymous","Y123R A145S Y178F",3
"lib1","SARS-CoV-2","TCGCATCAAAATAAAT",3,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P K48T F70L N118M K128R S184M",6
"lib1","SARS-CoV-2","TCGCATCAGAAACAAC",8,57.04,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N1H W23R G155S L162Y L183F",5
"lib1","SARS-CoV-2","TCGCATCGCCCCGTAG",4,28.53,9.61,-1.15,0.1,1.74,1.07,0,">1 nonsynonymous","A33L A42R P82S",3
"lib1","SARS-CoV-2","TCGCATCTATAGTCTG",11,88.54,8.7,-2.06,0.2,1.5,1.09,0.01,">1 nonsynonymous","C6L F185T",2
"lib1","SARS-CoV-2","TCGCATGATACACCGG",1,16.95,7.46,-3.3,0.44,1.5,1,0.07,">1 nonsynonymous","I2K V37N Y50R G83L D112P S139A",6
"lib1","SARS-CoV-2","TCGCATGGTTGACTTC",5,25.39,6,-4.76,2,1.5,1.17,0.03,"1 nonsynonymous","Y93R",1
"lib1","SARS-CoV-2","TCGCATGTCTAATCAA",1,14.84,6.85,-3.92,0.44,1.5,1.14,0.04,">1 nonsynonymous","A14M C61M I88G I142D",4
"lib1","SARS-CoV-2","TCGCATTCTTACACGC",7,167,10.23,-0.54,0.04,2.94,1.01,0,">1 nonsynonymous","S113G S200Q",2
"lib1","SARS-CoV-2","TCGCATTGAATAACAA",6,26.26,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I104W Y119V L131H",3
"lib1","SARS-CoV-2","TCGCATTGAATGGTCC",3,35.88,10.86,0.1,0.13,2.81,1.11,0.01,">1 nonsynonymous","G152A P197V",2
"lib1","SARS-CoV-2","TCGCCAAACACTCAAT",7,102.5,10.64,-0.12,0.05,2.92,1.02,0,"1 nonsynonymous","T15D",1
"lib1","SARS-CoV-2","TCGCCAAAGAGTATCC",5,27.13,10.06,-0.7,0.13,1.98,1,0.01,">1 nonsynonymous","F44P D59K A81S N110S",4
"lib1","SARS-CoV-2","TCGCCAAGCGACATTT",1,0.64,NA,NA,NA,NA,NA,NA,"stop","G116P R136G Y143W F156*",4
"lib1","SARS-CoV-2","TCGCCACACAAATATG",10,69.46,6.82,-3.94,0.31,1.5,1.2,0.02,">1 nonsynonymous","D34C D97Y Y121W P149N",4
"lib1","SARS-CoV-2","TCGCCACCGTGTCCAA",9,56.45,6.29,-4.47,0.58,1.5,1.23,0.02,">1 nonsynonymous","D59L D98L S139L T201L",4
"lib1","SARS-CoV-2","TCGCCAGACGACTCAC",2,36.27,10.24,-0.52,0.1,2.71,1,0.01,">1 nonsynonymous","T15I C195L",2
"lib1","SARS-CoV-2","TCGCCATATAACTTTT",2,8.84,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","I2A C158R T170I",3
"lib1","SARS-CoV-2","TCGCCATCCGGGGACA",5,38.91,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","W23L V103M",2
"lib1","SARS-CoV-2","TCGCCATCCTAAAATA",3,129.99,8.83,-1.93,0.07,2.3,1.13,0,">1 nonsynonymous","F44K G74S",2
"lib1","SARS-CoV-2","TCGCCATGAATGGTTG",10,122.89,10.16,-0.61,0.08,2.84,1.01,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","TCGCCATTCATATAAT",1,1.06,NA,NA,NA,NA,NA,NA,"stop","T3C S53V A89D S113*",4
"lib1","SARS-CoV-2","TCGCCATTTCAACTGA",2,29.8,6.01,-4.75,1.26,1.5,1.25,0.02,">1 nonsynonymous","E10Q V37M Y50R V173G",4
"lib1","SARS-CoV-2","TCGCCCACTATGATAA",1,9.19,9.43,-1.34,0.14,1.92,1,0.01,">1 nonsynonymous","N4Q E10I F47S E154C",4
"lib1","SARS-CoV-2","TCGCCCATTACGCATG",3,7.19,6,-4.76,2,3,1.38,0.02,">1 nonsynonymous","N13Q D112S",2
"lib1","SARS-CoV-2","TCGCCCCAACTAGGGA",4,150.37,8.41,-2.35,0.13,2.92,1.05,0.01,"1 nonsynonymous","F126S",1
"lib1","SARS-CoV-2","TCGCCCCGCAAGGTAT",2,71.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3C L125Y F156V Y175Q A190V P197W",6
"lib1","SARS-CoV-2","TCGCCCCTTTATCTAG",1,20.53,9.67,-1.09,0.13,1.8,1.07,0.01,">1 nonsynonymous","S45Y Q84Y",2
"lib1","SARS-CoV-2","TCGCCCGATAACAAAA",4,29.5,6.23,-4.54,1.59,1.5,1.31,0.07,">1 nonsynonymous","A105D T148L",2
"lib1","SARS-CoV-2","TCGCCCGCATTAACCC",2,63.02,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4L E10V L38G T85L A145L",5
"lib1","SARS-CoV-2","TCGCCCTCTTCAACAC",1,2.2,NA,NA,NA,NA,NA,NA,"stop","I88* F99L P161R",3
"lib1","SARS-CoV-2","TCGCCCTTTATAAAGT",3,40.94,6,-4.76,2,3,1.1,0,">1 nonsynonymous","F126G G155L",2
"lib1","SARS-CoV-2","TCGCCGAACAGTTTTC",2,39.99,6,-4.76,1.53,1.5,1.18,0.01,">1 nonsynonymous","L95M S113L K198M",3
"lib1","SARS-CoV-2","TCGCCGAGACACCGGC",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R T100Y A105G P161T Y178M T201W",6
"lib1","SARS-CoV-2","TCGCCGCGAAAAGATT",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N I88D K114W",3
"lib1","SARS-CoV-2","TCGCCGGGGACCGCCT",3,44.98,6,-4.76,1.18,1.5,1.16,0.02,">1 nonsynonymous","P82K K94Q P149S",3
"lib1","SARS-CoV-2","TCGCCGGGTATCACCC",3,72.85,10.7,-0.06,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCCTAAGTCGTGGC",2,25.6,10.74,-0.02,0.11,2.87,1.07,0.01,">1 nonsynonymous","Y35I T55N",2
"lib1","SARS-CoV-2","TCGCCTACACAACCCA",2,89.09,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","T170K Q176P",2
"lib1","SARS-CoV-2","TCGCCTACCCCAATGG",3,52.13,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","D34G Y50N G155L H189N",4
"lib1","SARS-CoV-2","TCGCCTAGTCCGATTC",1,20.95,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D68F F99I",2
"lib1","SARS-CoV-2","TCGCCTATAATATTTA",1,42.97,6.18,-4.59,0.51,1.5,1.19,0.01,">1 nonsynonymous","F12E G86V D97A N107V D112E E141R",6
"lib1","SARS-CoV-2","TCGCCTGCGTGACACT",6,111.33,10.22,-0.54,0.09,2.75,1.04,0,">1 nonsynonymous","T15H P149F",2
"lib1","SARS-CoV-2","TCGCCTGGGTATGGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A89C Y175*",2
"lib1","SARS-CoV-2","TCGCCTTGCAACATTT",6,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W N13Y Y93S",3
"lib1","SARS-CoV-2","TCGCGAAAGGTTACCC",6,116.01,6.46,-4.31,0.54,1.5,1.17,0.03,">1 nonsynonymous","V77H Y159L T201V",3
"lib1","SARS-CoV-2","TCGCGAACCTAAAGAG",6,44.74,9.73,-1.03,0.17,1.59,1.12,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","TCGCGACAGGTCTCCT",5,59.32,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N4W R16N K26T E141M Y159S",5
"lib1","SARS-CoV-2","TCGCGACCCTGCCCAA",7,14.88,6,-4.76,2,3,1.05,0,">1 nonsynonymous","V71E P96W W106T",3
"lib1","SARS-CoV-2","TCGCGAGACTCCAATG",11,149.17,8.37,-2.4,0.23,1.93,1.14,0.02,">1 nonsynonymous","S45L G51Q T170E",3
"lib1","SARS-CoV-2","TCGCGAGTACCTAACT",4,3.49,NA,NA,NA,NA,NA,NA,"stop","P82* F156P",2
"lib1","SARS-CoV-2","TCGCGCAAAAAAGAAG",3,107.19,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V20P V37C F44V Y119N A145D Q176A T201R",7
"lib1","SARS-CoV-2","TCGCGCACAATGCCTT",4,70.15,10.72,-0.05,0.04,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCGCACTACGTATT",9,141.8,10.66,-0.1,0.03,2.84,1.09,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TCGCGCATTCTTTAAG",3,65.29,9.43,-1.33,0.19,1.57,1.2,0.01,">1 nonsynonymous","V37M V103M",2
"lib1","SARS-CoV-2","TCGCGCCATTTGATAG",4,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71Q E141P S200N",3
"lib1","SARS-CoV-2","TCGCGCCGAATGAACA",1,23.49,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","F62Y T85N T100I S113W Y159L",5
"lib1","SARS-CoV-2","TCGCGGACAACACAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N D90V D112P",3
"lib1","SARS-CoV-2","TCGCGGTTATTCTAGC",1,48.74,9.62,-1.14,0.08,2.78,1.14,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","TCGCGTCACTCTTTTA",2,21.83,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","G101L F126T",2
"lib1","SARS-CoV-2","TCGCGTCCTGCTACCT",4,91.54,10.75,-0.02,0.06,2.95,1.03,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","TCGCGTTGGACTTGCC",3,45.18,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","R78P Y91V T100N Y143C Q176R",5
"lib1","SARS-CoV-2","TCGCGTTGTTCGCAAA",22,221.74,9.34,-1.42,0.09,2.38,1.09,0,">1 nonsynonymous","D75L K87R E135S",3
"lib1","SARS-CoV-2","TCGCGTTTTTAAACTA",2,36.45,10.12,-0.64,0.08,2.65,1.02,0,">1 nonsynonymous","Y35N E141A",2
"lib1","SARS-CoV-2","TCGCTAAGATTATCGC",7,27.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40V T46G R73L D90C",4
"lib1","SARS-CoV-2","TCGCTAAGCAGAATGA",2,29.63,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","F12S V77K P96L N110S T140P Y178H",6
"lib1","SARS-CoV-2","TCGCTAAGGCGATAGA",2,13.42,6.48,-4.29,0.38,3,1.06,0.02,">1 nonsynonymous","D34H F99C V173N",3
"lib1","SARS-CoV-2","TCGCTAATAAGTTAAT",2,38.26,10.23,-0.53,0.08,2.74,1,0,">1 nonsynonymous","D98I S164Y",2
"lib1","SARS-CoV-2","TCGCTACACGTAGTTC",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y V32S F47Y T170V S200C",5
"lib1","SARS-CoV-2","TCGCTACATAGCACAA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S V77D V103N Q144S G155F L162K",6
"lib1","SARS-CoV-2","TCGCTACCAATTTTAC",1,12.83,9.22,-1.54,0.12,2.81,1.09,0.01,"1 nonsynonymous","G117L",1
"lib1","SARS-CoV-2","TCGCTACCATGGTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3G F44* N107Y",3
"lib1","SARS-CoV-2","TCGCTACTCCCGTGAG",2,56.13,9.91,-0.85,0.12,2.26,1.01,0.01,"1 nonsynonymous","L38H",1
"lib1","SARS-CoV-2","TCGCTACTTATGAACG",3,0.13,NA,NA,NA,NA,NA,NA,"stop","P7*",1
"lib1","SARS-CoV-2","TCGCTATAACTACTGC",6,35.01,9.36,-1.4,0.31,1.5,1,0.03,">1 nonsynonymous","N1V F44L P96T",3
"lib1","SARS-CoV-2","TCGCTATAATACTACA",6,70.82,8.7,-2.07,0.14,1.64,1.08,0.01,">1 nonsynonymous","F12P G116L",2
"lib1","SARS-CoV-2","TCGCTATAATCTTATT",4,45.76,8.47,-2.29,0.19,2.1,1.13,0.01,">1 nonsynonymous","Y91K K114P",2
"lib1","SARS-CoV-2","TCGCTATAGTCCCGGG",4,0.75,NA,NA,NA,NA,NA,NA,"stop","F70* G86H",2
"lib1","SARS-CoV-2","TCGCTATCACACTGTC",7,87.15,10.16,-0.6,0.06,2.78,1,0,">1 nonsynonymous","N120L S164W",2
"lib1","SARS-CoV-2","TCGCTATCAGCCTTGA",3,13.45,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","K48P L57F D90Y A105S P197L",5
"lib1","SARS-CoV-2","TCGCTCACAGGTTGAT",1,10.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16Q K48G A81L S129T",4
"lib1","SARS-CoV-2","TCGCTCCAGGTCTAAG",4,20.61,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6S P82L D112E L131C",4
"lib1","SARS-CoV-2","TCGCTCCCGGACCCAA",1,9.51,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L95W W106Q",2
"lib1","SARS-CoV-2","TCGCTCCTAACGCTCG",1,0.44,NA,NA,NA,NA,NA,NA,"stop","Y39T C49A T55G F62M F99P Y119* A190P",7
"lib1","SARS-CoV-2","TCGCTCGGCGCCCAGG",3,38.2,6.02,-4.74,0.48,1.5,1.11,0.01,">1 nonsynonymous","A14C Y35M A89F E141S",4
"lib1","SARS-CoV-2","TCGCTGACATCCGCTA",5,57.15,6.88,-3.89,0.36,1.5,1.18,0.02,">1 nonsynonymous","V52S C61M D90F L122V",4
"lib1","SARS-CoV-2","TCGCTGGACTCGTTAA",1,31.51,10.78,0.01,0.1,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGCTGGTAGCGCAAG",4,77.49,9.45,-1.31,0.05,2.82,1.06,0,">1 nonsynonymous","G9R R16H E154D G174Q",4
"lib1","SARS-CoV-2","TCGCTTAATTATCCTA",10,91.29,8.6,-2.16,0.3,1.5,1.09,0.04,">1 nonsynonymous","Y35T D90V S129M",3
"lib1","SARS-CoV-2","TCGCTTACATAAATAC",14,61.06,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","D75N P96L C158G",3
"lib1","SARS-CoV-2","TCGCTTACTTTAGACT",1,69.1,10.67,-0.1,0.09,2.86,1.1,0,"1 nonsynonymous","T148N",1
"lib1","SARS-CoV-2","TCGCTTATAATTCTGA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","T15Q K56L F99C K132E T140C F167*",6
"lib1","SARS-CoV-2","TCGCTTCATAAACCGT",1,16.81,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A22Q A33C Q84Y N151D Q176T",5
"lib1","SARS-CoV-2","TCGCTTCCCTGACCAA",4,0.39,NA,NA,NA,NA,NA,NA,"stop","T3N N40Y L95* L122K",4
"lib1","SARS-CoV-2","TCGCTTCCGTCGAGCA",3,2.08,NA,NA,NA,NA,NA,NA,"stop","P7* A14G C61G K114L G174N",5
"lib1","SARS-CoV-2","TCGCTTCTAATAAACT",8,51.72,8.63,-2.13,0.23,1.69,1.17,0.02,">1 nonsynonymous","T55F Y66V K87M D97R I138S P149Q S164F T201S",8
"lib1","SARS-CoV-2","TCGCTTGTGGGTCTTT",1,16.89,9.93,-0.83,0.08,2.69,1.04,0,">1 nonsynonymous","A33I L60P Y123R",3
"lib1","SARS-CoV-2","TCGCTTTAGTTAACTC",1,8.41,10.86,0.09,0.09,2.88,1.05,0,"1 nonsynonymous","N40H",1
"lib1","SARS-CoV-2","TCGCTTTCCGGCATAA",3,3.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E76A",1
"lib1","SARS-CoV-2","TCGCTTTCTAATCTGG",1,18.47,10.26,-0.51,0.09,2.74,1,0.01,">1 nonsynonymous","A14C N64C",2
"lib1","SARS-CoV-2","TCGCTTTGACTTTCAA",3,11.33,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","K26L Y50H Y119L F185S",4
"lib1","SARS-CoV-2","TCGCTTTTAGTGACGT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T Y123N",2
"lib1","SARS-CoV-2","TCGCTTTTTATACAGA",6,66.47,8.44,-2.32,0.15,2.45,1.12,0.01,">1 nonsynonymous","N40D I142R P149H",3
"lib1","SARS-CoV-2","TCGGAAAAATATATCA",7,25.47,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","Y91P V103T E135L",3
"lib1","SARS-CoV-2","TCGGAAATGGAGCCTT",13,11.45,NA,NA,NA,NA,NA,NA,"stop","C61T F99* R127T S200K",4
"lib1","SARS-CoV-2","TCGGAATAAAAGTCGC",1,10.94,10.76,-0.01,0.06,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGGACAATATCCGAA",2,13.76,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","R124S P149Q",2
"lib1","SARS-CoV-2","TCGGACACAACTGGTC",2,56.27,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","V77C Q176R",2
"lib1","SARS-CoV-2","TCGGACACTGCCTGAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M S45G C49T K87E G117R V182P",6
"lib1","SARS-CoV-2","TCGGACCAGGTGTTAC",2,21.99,9.74,-1.03,0.09,2.48,1.08,0,"1 nonsynonymous","V11A",1
"lib1","SARS-CoV-2","TCGGACGAGACCAGTA",5,28.8,8.04,-2.73,0.3,1.91,1.26,0.03,">1 nonsynonymous","N24A A81C K114W L122N E141L",5
"lib1","SARS-CoV-2","TCGGACTAGACGCACA",2,19.39,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","L5I D68K I104S I142T F160L",5
"lib1","SARS-CoV-2","TCGGACTCTCAAGGAG",16,169.11,10.29,-0.47,0.04,2.8,1.01,0,"1 nonsynonymous","D34H",1
"lib1","SARS-CoV-2","TCGGAGCCTGTGCCCC",2,5.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9R C49H V153G K198A",4
"lib1","SARS-CoV-2","TCGGAGCGTAATATAT",1,5.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I D97M Y165L N171T",4
"lib1","SARS-CoV-2","TCGGAGTAGCGATACG",2,53.99,6,-4.76,1.95,1.5,1.16,0.02,">1 nonsynonymous","A18L L60T Y119L",3
"lib1","SARS-CoV-2","TCGGATATCCAAAAAG",3,15.78,10.11,-0.65,0.15,2.76,1,0.01,">1 nonsynonymous","A14M S36P L122H",3
"lib1","SARS-CoV-2","TCGGATCGTAATACAG",5,62.54,10.73,-0.03,0.08,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TCGGATTAATCGCCCA",1,14.01,7.14,-3.62,0.64,1.5,1.26,0.06,">1 nonsynonymous","N13M R124L",2
"lib1","SARS-CoV-2","TCGGATTACGGCCGAA",4,253.92,10.7,-0.07,0.05,2.92,1.03,0,">1 nonsynonymous","I2L V52L",2
"lib1","SARS-CoV-2","TCGGATTGAGAAGCAG",6,12.68,6,-4.76,2,1.5,1.17,0.07,">1 nonsynonymous","G9S F70C Y121S",3
"lib1","SARS-CoV-2","TCGGCAACATATTTTG",5,49.41,6.01,-4.76,1.01,1.5,1.24,0.02,">1 nonsynonymous","I2W F17A K94T C150I K198G",5
"lib1","SARS-CoV-2","TCGGCAAGGCTGCCCT",6,80.27,10.66,-0.11,0.06,2.91,1.05,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TCGGCAATGCGACCGT",3,18.72,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K56W G101T P149F",3
"lib1","SARS-CoV-2","TCGGCAGTCAAGATTA",3,53.54,10.78,0.01,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGGCATACCCCATGT",4,1.47,NA,NA,NA,NA,NA,NA,"stop","D97S D112G G117* L125H",4
"lib1","SARS-CoV-2","TCGGCATTATATCCAG",1,20.53,6.58,-4.18,0.98,1.5,1.2,0.07,">1 nonsynonymous","D97R W106N",2
"lib1","SARS-CoV-2","TCGGCATTTCTCTGAG",3,43.74,10.66,-0.1,0.05,2.92,1.07,0,"1 nonsynonymous","A33C",1
"lib1","SARS-CoV-2","TCGGCCTCATCAATGT",5,57.87,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","L57S L95T K198D",3
"lib1","SARS-CoV-2","TCGGCCTCCCGACAGA",9,104.89,7.83,-2.94,0.12,1.72,1.16,0,">1 nonsynonymous","S41F C158R",2
"lib1","SARS-CoV-2","TCGGCCTCCGAGGGGC",2,34.65,10.82,0.06,0.09,2.91,1.03,0,"1 nonsynonymous","D75S",1
"lib1","SARS-CoV-2","TCGGCCTCTATTATCA",1,4.92,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCGGCGCCAAGAGCCA",10,172.08,10.48,-0.28,0.04,2.92,1.02,0,"1 nonsynonymous","G116F",1
"lib1","SARS-CoV-2","TCGGCGCTGTAACAAC",5,53.6,6.98,-3.79,0.29,1.5,1.16,0.02,">1 nonsynonymous","T46G Y66S G83N N107R",4
"lib1","SARS-CoV-2","TCGGCGTTGATCAAAT",2,42.33,9.75,-1.01,0.14,1.99,1.12,0.01,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TCGGCTGTAAAATACT",1,5.94,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","I28A F99I",2
"lib1","SARS-CoV-2","TCGGCTTACAACTAAA",4,7.76,10.37,-0.39,0.14,2.73,1,0.01,">1 nonsynonymous","L60R K132P",2
"lib1","SARS-CoV-2","TCGGGACAAAATCTTC",3,43.16,8.66,-2.1,0.08,2.63,1.08,0,">1 nonsynonymous","D59Q K94H G174I",3
"lib1","SARS-CoV-2","TCGGGATAGAATGATG",4,0.36,NA,NA,NA,NA,NA,NA,"stop","S19W G51* D97V T148K",4
"lib1","SARS-CoV-2","TCGGGCAAGATTTTAC",2,9.48,10.77,0.01,0.12,2.88,1.11,0,">1 nonsynonymous","K56R L122R",2
"lib1","SARS-CoV-2","TCGGGCCTAATTTTAG",12,142.27,9.7,-1.06,0.1,1.97,1.04,0,">1 nonsynonymous","D59Y F62G K128C",3
"lib1","SARS-CoV-2","TCGGGGAAACACTAGA",9,58.86,9.93,-0.83,0.21,1.51,1.1,0.02,">1 nonsynonymous","L60V G83W D98Y",3
"lib1","SARS-CoV-2","TCGGGGAGAATATATC",6,54.5,10.05,-0.71,0.09,1.99,1.09,0,">1 nonsynonymous","G9K I104S",2
"lib1","SARS-CoV-2","TCGGGGGAACCTAAGC",4,11.46,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","F44D D112W V115L R127T L183S",5
"lib1","SARS-CoV-2","TCGGGTCACTTTCTCG",3,16.77,9.95,-0.82,0.16,2.11,1,0.01,">1 nonsynonymous","A105G S129P",2
"lib1","SARS-CoV-2","TCGGGTGACGTACGGG",2,22.98,10.13,-0.63,0.1,2.81,1,0,">1 nonsynonymous","A42N G155I",2
"lib1","SARS-CoV-2","TCGGGTGCAACAATTG",5,107.01,8.9,-1.87,0.13,1.84,1.13,0.01,">1 nonsynonymous","P7V S36G I138L S147L P169M",5
"lib1","SARS-CoV-2","TCGGTAACCTATTCAC",3,7.73,6.24,-4.52,1.45,1.5,1.34,0.06,">1 nonsynonymous","N92T L122P E135S G146I V181R",5
"lib1","SARS-CoV-2","TCGGTAACTGGTGTAT",2,30.78,10.66,-0.11,0.07,2.86,1.1,0,"1 nonsynonymous","C61N",1
"lib1","SARS-CoV-2","TCGGTAACTGTACTCC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","L5C D59* Y91K E135Y Q144*",5
"lib1","SARS-CoV-2","TCGGTACTGTAAATGT",4,67.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83D Y119F R127L",3
"lib1","SARS-CoV-2","TCGGTAGCTGAGATAA",2,57.32,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","K56E Y93T F167S",3
"lib1","SARS-CoV-2","TCGGTATTATTCGAGA",7,60.75,10.71,-0.05,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGGTCACGTTTTTTG",2,54.58,10.11,-0.66,0.07,2.16,1,0,">1 nonsynonymous","N40E Q84W",2
"lib1","SARS-CoV-2","TCGGTCATGATATCTT",10,44.72,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N120V P149N L183E",3
"lib1","SARS-CoV-2","TCGGTCCCTCTTCAAC",1,0.76,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCGGTCCTCAGCAGAT",3,0.75,NA,NA,NA,NA,NA,NA,"stop","V65R Q79* D97H W106M K114V P149H",6
"lib1","SARS-CoV-2","TCGGTCCTGCTCATTG",4,0.83,NA,NA,NA,NA,NA,NA,"stop","A18Q Y121*",2
"lib1","SARS-CoV-2","TCGGTGATGGTGTAGA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S19N D90S N107T L122* N130Y",5
"lib1","SARS-CoV-2","TCGGTGCAATATGACG",4,111.46,9.05,-1.71,0.05,2.83,1.16,0,">1 nonsynonymous","K87A F156N",2
"lib1","SARS-CoV-2","TCGGTGCCATGAACGA",4,19.42,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","N4S S41M N92D Y119S S129M",5
"lib1","SARS-CoV-2","TCGGTGCTTAACTACC",2,17.02,8.9,-1.86,0.13,1.93,1.05,0.01,"1 nonsynonymous","Y165R",1
"lib1","SARS-CoV-2","TCGGTGCTTCACTACT",3,41.98,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","TCGGTGTCCTCAACGA",2,12.96,9.36,-1.41,0.26,2.19,1.05,0.03,">1 nonsynonymous","N4L Q84I S139R",3
"lib1","SARS-CoV-2","TCGGTGTTGGAGGTAC",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H G83C C158I T201A",4
"lib1","SARS-CoV-2","TCGGTGTTTAATTATC",1,15.07,8.75,-2.02,0.21,1.51,1.19,0.02,">1 nonsynonymous","A14S P54E D97F E154D",4
"lib1","SARS-CoV-2","TCGGTGTTTTAAATTT",16,74.98,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","C49P G166L",2
"lib1","SARS-CoV-2","TCGGTTAAACATTCCT",1,6.11,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D98L W106V D112G Y119E T140K G146S",6
"lib1","SARS-CoV-2","TCGGTTATGCTTTCAA",7,78.12,10.73,-0.04,0.06,2.91,1.05,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TCGGTTCACCCGCACT",1,19.79,10.78,0.01,0.13,2.9,1,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","TCGGTTCCGCAACCAA",6,4.12,NA,NA,NA,NA,NA,NA,"stop","N4T E10I Y50L N118* K128M",5
"lib1","SARS-CoV-2","TCGGTTGTAGGAGCGA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","N1L F62N Y91* Q144I S147A",5
"lib1","SARS-CoV-2","TCGGTTTATACGTGTC",7,30.05,7.76,-3,0.22,1.5,1,0.02,">1 nonsynonymous","S43P G86N T148C A190S",4
"lib1","SARS-CoV-2","TCGGTTTATGAAACCC",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72S T140I G152L T201L",4
"lib1","SARS-CoV-2","TCGGTTTGCATATTAG",2,12.29,6,-4.76,2,3,1.28,0.04,">1 nonsynonymous","L60K A105K P177R",3
"lib1","SARS-CoV-2","TCGTAAAATGCTTCTG",3,95.81,8.39,-2.38,0.11,2.08,1.09,0,">1 nonsynonymous","V37L D112M",2
"lib1","SARS-CoV-2","TCGTAAACACAGTAAT",1,99.23,10.05,-0.71,0.09,2.03,1.03,0,">1 nonsynonymous","F47C I104T",2
"lib1","SARS-CoV-2","TCGTAAACCAACTCTA",3,17.16,10.3,-0.47,0.1,2.84,1.09,0.01,">1 nonsynonymous","P7G K56C",2
"lib1","SARS-CoV-2","TCGTAAAGAATGAAAA",3,57.65,10.21,-0.56,0.05,2.77,1.05,0,"1 nonsynonymous","R136A",1
"lib1","SARS-CoV-2","TCGTAAAGTAAATCGG",4,35.76,10.15,-0.61,0.14,2.77,1.02,0.01,"1 nonsynonymous","S69R",1
"lib1","SARS-CoV-2","TCGTAAGACATAGAAA",2,63.95,10.26,-0.5,0.06,2.71,1.03,0,">1 nonsynonymous","L5P A105I",2
"lib1","SARS-CoV-2","TCGTAAGCTTTTTCGC",4,137.41,10.73,-0.03,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGTAATACCATAATG",3,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N107F",2
"lib1","SARS-CoV-2","TCGTACTCGTTTCAAC",3,32.02,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9T G83P N107D Y123I",4
"lib1","SARS-CoV-2","TCGTACTCTTTATGAC",1,33.08,10.78,0.01,0.08,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGTAGTTTAAGGGCA",4,47.27,10.3,-0.47,0.05,2.93,1,0,">1 nonsynonymous","S41H Y121M",2
"lib1","SARS-CoV-2","TCGTATAAGTCCGCCA",9,88.55,10.58,-0.19,0.05,2.91,1.03,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","TCGTATAATTGGCCTG",1,8.71,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","P82W G172N V180Y",3
"lib1","SARS-CoV-2","TCGTATCTTGTCTCCG",3,42.65,10.32,-0.44,0.1,2.88,1,0,">1 nonsynonymous","C61E S129F I138Q T148N T201L",5
"lib1","SARS-CoV-2","TCGTATTACATACTTT",3,47.57,9.79,-0.97,0.11,2.06,1.05,0.01,">1 nonsynonymous","T15M K114M K128L",3
"lib1","SARS-CoV-2","TCGTATTATGATAAAA",4,120.62,10.38,-0.39,0.06,2.91,1.01,0,">1 nonsynonymous","Y35M G51T",2
"lib1","SARS-CoV-2","TCGTCAATTGAACGAT",12,148.23,10.16,-0.6,0.05,2.44,1.03,0,">1 nonsynonymous","D90G S139G",2
"lib1","SARS-CoV-2","TCGTCATCCCTCGAAA",3,46.58,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","P7C P177V",2
"lib1","SARS-CoV-2","TCGTCCATATATAAGG",1,0.58,NA,NA,NA,NA,NA,NA,"stop","Y50H K56R P96* W106T S113L",5
"lib1","SARS-CoV-2","TCGTCCCAAGGGAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* K94L Y119T",3
"lib1","SARS-CoV-2","TCGTCCGAATTAAACG",2,65.12,10.73,-0.03,0.08,2.83,1.06,0,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","TCGTCCGTTGTCAAAC",5,46.29,6,-4.76,2,3,1.21,0,">1 nonsynonymous","V32N L95P G117L P149Y",4
"lib1","SARS-CoV-2","TCGTCCTTGTAAAACG",5,5.93,10.77,0,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGTCTGAGGAGTGAC",4,112.59,9.3,-1.46,0.07,2.81,1.09,0,"1 nonsynonymous","Q163D",1
"lib1","SARS-CoV-2","TCGTCTTAAACACATA",1,20.13,10.54,-0.22,0.09,2.83,1.1,0.01,">1 nonsynonymous","V52Y N120D",2
"lib1","SARS-CoV-2","TCGTGCTACCATAACA",7,54.64,10.68,-0.09,0.06,2.95,1.07,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","TCGTGTCTCTCAAAAC",5,20.87,9.6,-1.17,0.04,2.92,1.02,0,">1 nonsynonymous","Y119N E154I G166Q",3
"lib1","SARS-CoV-2","TCGTTAAAACAGTGAA",6,104.06,9.92,-0.85,0.05,2.86,1.01,0,">1 nonsynonymous","R73M D75N F160I",3
"lib1","SARS-CoV-2","TCGTTAAATGGCTATA",6,49.7,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14Q Y35Q A42R A67H L95Y Y119H F126R",7
"lib1","SARS-CoV-2","TCGTTAATTCTAGACT",7,40.05,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T3N S19R G116L T140L R179S",5
"lib1","SARS-CoV-2","TCGTTACAAAATGGGT",16,190.82,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A81T Y91L Y119N Y165P",4
"lib1","SARS-CoV-2","TCGTTAGAAATTCACA",9,59.38,9.01,-1.76,0.13,1.88,1.09,0.01,">1 nonsynonymous","G83R G116V F134D",3
"lib1","SARS-CoV-2","TCGTTAGACATGAAAA",4,34.67,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y66R N107R N118S C150S",4
"lib1","SARS-CoV-2","TCGTTATAGAACCAGG",5,2.03,NA,NA,NA,NA,NA,NA,"stop","L5S N107S Y121*",3
"lib1","SARS-CoV-2","TCGTTATCGATACTAT",2,1.72,NA,NA,NA,NA,NA,NA,"stop","K26* P82M F126T",3
"lib1","SARS-CoV-2","TCGTTCAAACACGCGC",4,16.72,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","Y35S L60K I104R F156A K198D",5
"lib1","SARS-CoV-2","TCGTTCACGTAATAAA",9,1.51,NA,NA,NA,NA,NA,NA,"stop","C6A S41* E141C",3
"lib1","SARS-CoV-2","TCGTTCTCTGAATGGA",3,42.93,9.07,-1.7,0.18,1.5,1.04,0.01,">1 nonsynonymous","K26S G51W",2
"lib1","SARS-CoV-2","TCGTTCTTACAGCTAC",4,2.37,NA,NA,NA,NA,NA,NA,"stop","A89* C195I",2
"lib1","SARS-CoV-2","TCGTTGAGCATCTCTA",1,33.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K K56C P169H",3
"lib1","SARS-CoV-2","TCGTTGATGCCAGGCC",4,11.91,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","G9L L38F F99E A105V",4
"lib1","SARS-CoV-2","TCGTTGCGCGGACCGT",6,43.96,10.03,-0.73,0.11,1.93,1.06,0.01,">1 nonsynonymous","T3K W106V",2
"lib1","SARS-CoV-2","TCGTTGCGTCCCCATG",5,42.89,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","W23M Y93S G172R V182F",4
"lib1","SARS-CoV-2","TCGTTGGACTAAGGAC",4,14.19,9.35,-1.42,0.42,1.5,1,0.07,">1 nonsynonymous","L38P D90W",2
"lib1","SARS-CoV-2","TCGTTTACAACGTCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L95* Q168S",2
"lib1","SARS-CoV-2","TCGTTTATCATTGTGA",3,43.34,10.78,0.01,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCGTTTATCGAGCTAT",3,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L Y66R I104S",3
"lib1","SARS-CoV-2","TCGTTTTACGATTCCC",2,19.09,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S29R C61S S69H G146P Q168T",5
"lib1","SARS-CoV-2","TCGTTTTATAACTTCA",4,56.54,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","T55S G101R W106E A145R Y165A T170M",6
"lib1","SARS-CoV-2","TCGTTTTATTATAGAA",5,26.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75M I104Q P197K",3
"lib1","SARS-CoV-2","TCGTTTTCATACCGAA",10,77.39,10.16,-0.6,0.07,2.14,1.01,0,"1 nonsynonymous","W106A",1
"lib1","SARS-CoV-2","TCGTTTTTATTACTTG",2,7.19,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","I28K D34N F47R D137L S164K",5
"lib1","SARS-CoV-2","TCTAAAAAAATTTCAT",7,136.28,10.81,0.05,0.08,2.91,1.07,0,"1 nonsynonymous","S53T",1
"lib1","SARS-CoV-2","TCTAAAAAATATCTGT",2,33.4,10.95,0.19,0.13,2.9,1.01,0.01,">1 nonsynonymous","I2P E141D",2
"lib1","SARS-CoV-2","TCTAAAAACCCCAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K N120V R127M",3
"lib1","SARS-CoV-2","TCTAAAAACCGTATCG",2,19.49,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C31T L57H G74I N92D",4
"lib1","SARS-CoV-2","TCTAAAAATCACCGAG",1,68.91,8.48,-2.28,0.12,2.73,1.09,0.01,">1 nonsynonymous","Y175S T201A",2
"lib1","SARS-CoV-2","TCTAAAACACCAGTCA",4,35.13,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","E154F F167S",2
"lib1","SARS-CoV-2","TCTAAAACATCTGTAT",3,22.62,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L57R C102Q",2
"lib1","SARS-CoV-2","TCTAAAACGTAAGACA",3,19.99,6,-4.76,1.57,1.5,1.09,0.01,">1 nonsynonymous","R25G C49I Q84E I104P A145V",5
"lib1","SARS-CoV-2","TCTAAAACTTAAAAAG",6,5.4,NA,NA,NA,NA,NA,NA,"stop","P177*",1
"lib1","SARS-CoV-2","TCTAAAAGAGCTGTGA",3,71.26,10.78,0.02,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAAAATATAGACAA",7,89.12,6.1,-4.67,1.12,1.5,1.23,0.03,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","TCTAAAATCTACAGCA",3,42.2,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","I28P S53D D112Y",3
"lib1","SARS-CoV-2","TCTAAAATGATAGTGT",16,226.03,10.13,-0.63,0.06,2.65,1,0,">1 nonsynonymous","D34R K128R",2
"lib1","SARS-CoV-2","TCTAAAATTCAGGCAC",2,56.09,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S19K E76Y G83T V115C",4
"lib1","SARS-CoV-2","TCTAAAATTTGTAGTC",2,13.84,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","C61L A105R",2
"lib1","SARS-CoV-2","TCTAAACAAAAATGCA",7,110.51,10.69,-0.08,0.08,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAAACAATGAACGC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","A14R S45* T55R R136L K199M",5
"lib1","SARS-CoV-2","TCTAAACAATGAGAAT",7,113.03,7.13,-3.63,0.09,2,1.12,0,">1 nonsynonymous","R27K C150M",2
"lib1","SARS-CoV-2","TCTAAACAGACCCAAA",3,52.7,8.82,-1.94,0.13,1.76,1.13,0.01,">1 nonsynonymous","T3N G9I L38R P197M",4
"lib1","SARS-CoV-2","TCTAAACAGCCTTGGA",2,22.99,10.86,0.1,0.08,2.89,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAAACCCTTGCGAG",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S A22F N40Q Q84H C102P Y143L",6
"lib1","SARS-CoV-2","TCTAAACCTTGGAGTT",7,98.26,8.69,-2.08,0.13,1.6,1.15,0.01,">1 nonsynonymous","P96I F156I",2
"lib1","SARS-CoV-2","TCTAAACGCGTGCTTC",3,26.59,6.17,-4.59,0.5,1.5,1.14,0.01,">1 nonsynonymous","V77R D137N T201F",3
"lib1","SARS-CoV-2","TCTAAACTCTCAACCG",3,12.64,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","N4Y R27V L38R N107I L125G R179V",6
"lib1","SARS-CoV-2","TCTAAACTGTAATGTG",1,12.64,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","Y35H N171K H189S",3
"lib1","SARS-CoV-2","TCTAAACTGTTCGCAA",8,67.51,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","K26E L95H P133Y E154V K199N",5
"lib1","SARS-CoV-2","TCTAAACTTAGGACTG",1,22.12,9.79,-0.98,0.19,1.78,1.05,0.01,">1 nonsynonymous","F99H K128N K198L",3
"lib1","SARS-CoV-2","TCTAAAGAAGATATGC",2,11.98,7.92,-2.85,0.52,1.5,1.06,0.08,">1 nonsynonymous","A22P S139T V180I",3
"lib1","SARS-CoV-2","TCTAAAGATGAGATAA",2,73.67,10.81,0.04,0.05,2.92,1.07,0,"1 nonsynonymous","I104F",1
"lib1","SARS-CoV-2","TCTAAAGCAAATAACT",1,14.45,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10N V37E G86W G146T",4
"lib1","SARS-CoV-2","TCTAAAGCATAGTAAC",5,103.55,10.78,0.02,0.07,2.89,1.05,0,"1 nonsynonymous","S147L",1
"lib1","SARS-CoV-2","TCTAAAGGTAATATAC",2,14.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12V Y35S T55A K87M K94L",5
"lib1","SARS-CoV-2","TCTAAAGTACATAAGT",4,9.3,9.28,-1.48,0.25,1.79,1.06,0.04,">1 nonsynonymous","G83H Y123M G152Y A190P",4
"lib1","SARS-CoV-2","TCTAAATAAGCAACGG",1,0.39,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TCTAAATCGCTAATCA",1,8.5,10.83,0.06,0.1,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAAATGATAAGGAA",3,93.32,10.85,0.08,0.09,2.84,1.05,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","TCTAAATGCCATAGAG",5,89.3,10.87,0.1,0.05,2.89,1.07,0,">1 nonsynonymous","T3S N109K",2
"lib1","SARS-CoV-2","TCTAAATTATTCATTC",1,10.1,10.39,-0.38,0.12,2.86,1.09,0.01,">1 nonsynonymous","G51H G83H",2
"lib1","SARS-CoV-2","TCTAAATTTATAAAAA",3,42.47,9.52,-1.24,0.06,2.95,1.01,0,"1 nonsynonymous","A145F",1
"lib1","SARS-CoV-2","TCTAACAAAACCACTG",1,11.7,8.97,-1.79,0.25,1.62,1.25,0.04,"1 nonsynonymous","P82S",1
"lib1","SARS-CoV-2","TCTAACAACACTACTG",1,22.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T100S N107F",2
"lib1","SARS-CoV-2","TCTAACAAGCATGAAA",5,68.82,10.74,-0.03,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAACAAGTGATAAT",7,25.08,6,-4.76,2,3,1.06,0,">1 nonsynonymous","G86T F99M",2
"lib1","SARS-CoV-2","TCTAACAATACAGGAC",9,3.86,NA,NA,NA,NA,NA,NA,"stop","V11L C31D R73* D97N A192P",5
"lib1","SARS-CoV-2","TCTAACACAGAGAGAT",4,95.49,10.7,-0.07,0.09,2.87,1.11,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTAACACCTACACTC",6,173.77,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","V37C D59R P161L Y178I",4
"lib1","SARS-CoV-2","TCTAACATTAAAACAG",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q G101P E135R C158Y G166C",5
"lib1","SARS-CoV-2","TCTAACATTTCTATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","D34S K56* K87R I104W D112*",5
"lib1","SARS-CoV-2","TCTAACCAATTAGGAT",3,43.78,10.54,-0.22,0.04,2.93,1.05,0,">1 nonsynonymous","N58S K128M",2
"lib1","SARS-CoV-2","TCTAACCACATTTTTA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A18Y N118F I142Y T148S N151*",5
"lib1","SARS-CoV-2","TCTAACCATCCCAGGG",1,0.4,NA,NA,NA,NA,NA,NA,"stop","K48P I104* E154H",3
"lib1","SARS-CoV-2","TCTAACCATTGTACTA",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y K128C F185T",3
"lib1","SARS-CoV-2","TCTAACCCTCCAGAAA",5,38.94,9.9,-0.86,0.17,1.68,1.12,0.01,">1 nonsynonymous","N58S Q168F F185S",3
"lib1","SARS-CoV-2","TCTAACCCTTATGATT",2,40.74,10.83,0.06,0.05,2.98,1.01,0,"1 nonsynonymous","R27A",1
"lib1","SARS-CoV-2","TCTAACCTAAGCAACA",5,56.91,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28E D59L T170M",3
"lib1","SARS-CoV-2","TCTAACCTACTTCACG",1,44.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C31K C49K A67S",3
"lib1","SARS-CoV-2","TCTAACCTCATTTGAA",2,14.79,8.64,-2.12,0.17,1.81,1.15,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","TCTAACGCGTGCGTAG",1,24.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P54K P96N P149Y F167Y",4
"lib1","SARS-CoV-2","TCTAACGCTCCAGCCG",2,28.26,10.29,-0.48,0.11,2.56,1.01,0.01,">1 nonsynonymous","A14S N24I",2
"lib1","SARS-CoV-2","TCTAACGGACTGTTAA",4,41.58,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","S108F S164W",2
"lib1","SARS-CoV-2","TCTAACTAAAATTTCG",3,71.45,6.05,-4.72,0.61,1.5,1.16,0.01,">1 nonsynonymous","C31L G86I",2
"lib1","SARS-CoV-2","TCTAACTAAATTTCCT",4,0.52,NA,NA,NA,NA,NA,NA,"stop","K56W D68* L183T",3
"lib1","SARS-CoV-2","TCTAACTCAAAAGAAA",2,9.98,6,-4.76,2,1.5,1.1,0.05,">1 nonsynonymous","P96V D112S",2
"lib1","SARS-CoV-2","TCTAACTGAAGAGAAA",5,112.86,6,-4.76,0.93,1.5,1.18,0.01,">1 nonsynonymous","V37F I88E",2
"lib1","SARS-CoV-2","TCTAACTGATATGCAG",4,48.83,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C31L N58P Y93C Y159V",4
"lib1","SARS-CoV-2","TCTAACTGCGGCCTCT",5,34.19,10.53,-0.23,0.07,2.83,1.07,0,">1 nonsynonymous","F12L L122H",2
"lib1","SARS-CoV-2","TCTAACTTTGCACCTA",3,31.48,10.74,-0.02,0.08,2.84,1.1,0,">1 nonsynonymous","S129A E141K",2
"lib1","SARS-CoV-2","TCTAAGAAAATCACGG",2,6.64,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C49K L60T D90L",3
"lib1","SARS-CoV-2","TCTAAGAAGGGGACAG",2,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I N40M T55D G166I Q168H",5
"lib1","SARS-CoV-2","TCTAAGAATATATACA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R T100S N120T N151H",4
"lib1","SARS-CoV-2","TCTAAGACAAAACCAA",1,4.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13A",1
"lib1","SARS-CoV-2","TCTAAGACAACGCAAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCTAAGAGCGCATATC",6,66.05,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R25G N58P V103E V173G",4
"lib1","SARS-CoV-2","TCTAAGATAATTGAGA",2,41.16,6.9,-3.87,0.32,1.5,1.14,0.02,"1 nonsynonymous","C150L",1
"lib1","SARS-CoV-2","TCTAAGATATAAGACA",3,16.11,8.88,-1.88,0.19,1.5,1.16,0.02,">1 nonsynonymous","E10L Y91T",2
"lib1","SARS-CoV-2","TCTAAGATCCGCAACT",3,30.78,10.7,-0.06,0.06,2.93,1.04,0,">1 nonsynonymous","C61N K114L",2
"lib1","SARS-CoV-2","TCTAAGATCTATAACA",7,195.28,8.92,-1.84,0.07,2.76,1.11,0,">1 nonsynonymous","P54A Y119L S139G G196E",4
"lib1","SARS-CoV-2","TCTAAGATTCAGGGAG",4,21.35,9.94,-0.82,0.19,2.27,1.06,0.01,">1 nonsynonymous","N40A W106S L122A",3
"lib1","SARS-CoV-2","TCTAAGCATCTAGGAT",4,184.63,9.38,-1.38,0.08,2.66,1.13,0,">1 nonsynonymous","S139N P177A",2
"lib1","SARS-CoV-2","TCTAAGCATGAATAAA",5,12.93,6.13,-4.63,0.24,1.5,1.05,0,">1 nonsynonymous","T55I S69K Y121N K128D",4
"lib1","SARS-CoV-2","TCTAAGCATGTTCTAC",3,15.05,6,-4.76,1.65,1.5,1.09,0.01,">1 nonsynonymous","S36D L60M D98M Y119Q F167R",5
"lib1","SARS-CoV-2","TCTAAGCCCATTCGCG",1,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127L I142Y V180N",3
"lib1","SARS-CoV-2","TCTAAGCCTCGTATCA",1,56.37,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","Q84K A105F N120S T170K Q176T",5
"lib1","SARS-CoV-2","TCTAAGCGACGGTTAG",3,18.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55S K132R F167S",3
"lib1","SARS-CoV-2","TCTAAGCGGAAAAACT",3,42.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C61R D97P R136P F160G",4
"lib1","SARS-CoV-2","TCTAAGCGGCCTCTTT",3,70.37,10.01,-0.76,0.16,2.15,1,0.01,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","TCTAAGCTAAACTCCC",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54K P96N P149Y F167Y",4
"lib1","SARS-CoV-2","TCTAAGCTTATACCAT",5,44.41,9.63,-1.14,0.16,1.8,1.18,0.01,">1 nonsynonymous","S41L T55V K94Q L188M",4
"lib1","SARS-CoV-2","TCTAAGGAACCCCAGT",4,1.07,NA,NA,NA,NA,NA,NA,"stop","T55V F62V C102* G152N",4
"lib1","SARS-CoV-2","TCTAAGGACAGCCATG",2,6.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N C102A R124G A190T",4
"lib1","SARS-CoV-2","TCTAAGGCCAGTTATA",4,97.38,10.73,-0.03,0.04,2.95,1.01,0,"1 nonsynonymous","T85A",1
"lib1","SARS-CoV-2","TCTAAGGCTAAATGAC",2,79.71,10.75,-0.02,0.06,2.96,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTAAGGCTAACATCG",4,48.41,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","L5V G51P Y119C E141D",4
"lib1","SARS-CoV-2","TCTAAGGTAATGAGAG",2,6.89,6,-4.76,2,3,1.26,0,">1 nonsynonymous","C6R A14R Q79L N120H S129T",5
"lib1","SARS-CoV-2","TCTAAGTCTATACATT",3,1.57,NA,NA,NA,NA,NA,NA,"stop","C102* E154R S200H",3
"lib1","SARS-CoV-2","TCTAAGTGCATTGCCA",5,58.45,10.79,0.03,0.1,2.82,1.13,0,"1 nonsynonymous","D97P",1
"lib1","SARS-CoV-2","TCTAATAAAACTCGTA",5,0.56,NA,NA,NA,NA,NA,NA,"stop","S19M F62L Q84W G101* K114W N120F",6
"lib1","SARS-CoV-2","TCTAATAAACCTCACA",3,34.23,10.42,-0.34,0.05,2.88,1.05,0,">1 nonsynonymous","P7K S53P L60H",3
"lib1","SARS-CoV-2","TCTAATAAACGCTTAA",9,128.18,10.62,-0.15,0.04,2.9,1.05,0,">1 nonsynonymous","P149M T201V",2
"lib1","SARS-CoV-2","TCTAATAAATTACATG",3,14.67,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","F70V",1
"lib1","SARS-CoV-2","TCTAATAACATCTGAC",3,13.41,7.31,-3.46,0.51,1.5,1.11,0.08,">1 nonsynonymous","D34I F44G W106M K128T",4
"lib1","SARS-CoV-2","TCTAATAACTTATTTT",1,41.93,10.71,-0.05,0.05,2.99,1.02,0,">1 nonsynonymous","K48L S129D",2
"lib1","SARS-CoV-2","TCTAATAAGAATCATG",11,95.49,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","A81T N107I",2
"lib1","SARS-CoV-2","TCTAATAATAATATGT",9,119.38,6.2,-4.57,0.72,1.5,1.27,0.02,">1 nonsynonymous","R27Q Y39F T55A D68L D97W F160W",6
"lib1","SARS-CoV-2","TCTAATAATATACAAC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","L5Y D75P F99*",3
"lib1","SARS-CoV-2","TCTAATAATGTCCGTT",5,122.58,8.29,-2.47,0.15,1.88,1.1,0.01,">1 nonsynonymous","P7F A14Q S113N",3
"lib1","SARS-CoV-2","TCTAATACAATTATTA",2,8.84,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","V37T S53A I80R A89R K199Y",5
"lib1","SARS-CoV-2","TCTAATACACATAATG",2,0.33,NA,NA,NA,NA,NA,NA,"stop","V77Q W106G S113L L122I L131T P161L F167G Y178*",8
"lib1","SARS-CoV-2","TCTAATACCATATAAC",3,46.22,10.88,0.12,0.07,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTAATACGGCTAGTG",1,8.33,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F47R P54G R127H",3
"lib1","SARS-CoV-2","TCTAATACGTACTACA",3,29.92,10.69,-0.07,0.08,2.85,1.09,0,"1 nonsynonymous","T148W",1
"lib1","SARS-CoV-2","TCTAATACTCTGCCTG",2,3.11,NA,NA,NA,NA,NA,NA,"stop","I72L S139P L162C S200*",4
"lib1","SARS-CoV-2","TCTAATACTTATACAT",3,106.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S A89D L122Y",3
"lib1","SARS-CoV-2","TCTAATAGAGCATTCC",4,55.74,10.08,-0.68,0.08,2.7,1.04,0,">1 nonsynonymous","A14V T55G E141T",3
"lib1","SARS-CoV-2","TCTAATAGTATAAGTA",5,72.88,10.28,-0.48,0.04,2.96,1.02,0,">1 nonsynonymous","N40L E154P",2
"lib1","SARS-CoV-2","TCTAATATCAAATAAT",2,34.14,8.77,-2,0.12,1.81,1.09,0.01,">1 nonsynonymous","D90L N118L",2
"lib1","SARS-CoV-2","TCTAATATGCAGGATT",2,52.59,10.71,-0.06,0.08,2.91,1.04,0,">1 nonsynonymous","K132R P149S",2
"lib1","SARS-CoV-2","TCTAATATTGAAGTTA",9,100.9,8.4,-2.36,0.17,2.19,1.12,0.01,">1 nonsynonymous","P96S G117P T201C",3
"lib1","SARS-CoV-2","TCTAATATTTTCATGT",4,85.34,10.69,-0.07,0.03,2.93,1.03,0,"1 nonsynonymous","S184Y",1
"lib1","SARS-CoV-2","TCTAATCAATCTTCCC",6,1.73,NA,NA,NA,NA,NA,NA,"stop","T85I C195*",2
"lib1","SARS-CoV-2","TCTAATCATACCCAAA",6,39.95,6,-4.76,1.39,1.5,1.14,0.01,">1 nonsynonymous","V71N N151V",2
"lib1","SARS-CoV-2","TCTAATCATAGTTTAA",4,7.63,6.52,-4.25,0.25,2.86,1.25,0,">1 nonsynonymous","D90I L95Y W106K T201I",4
"lib1","SARS-CoV-2","TCTAATCCAAATATCG",5,77.43,9.89,-0.88,0.07,2.79,1.07,0,"1 nonsynonymous","G174C",1
"lib1","SARS-CoV-2","TCTAATCCGGAGGGAG",1,32.04,9.64,-1.12,0.16,1.78,1.13,0.01,">1 nonsynonymous","V11E T55F F62L",3
"lib1","SARS-CoV-2","TCTAATCCTATCCGCA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","R78P Y123* P149L",3
"lib1","SARS-CoV-2","TCTAATCCTCAGATAA",12,165.61,10.32,-0.44,0.08,2.94,1.03,0,">1 nonsynonymous","P7F T100V",2
"lib1","SARS-CoV-2","TCTAATCGAAGTCCAC",6,53.07,7.51,-3.25,0.36,1.5,1,0.05,"1 nonsynonymous","P177T",1
"lib1","SARS-CoV-2","TCTAATCGGTAAGGCT",7,143.56,9.44,-1.32,0.14,1.67,1.16,0.01,">1 nonsynonymous","N1V F8S V37E K56S V153I",5
"lib1","SARS-CoV-2","TCTAATCTATTATGGC",2,40.09,6.05,-4.71,0.52,1.5,1.11,0.01,">1 nonsynonymous","G86V N151K Q168G",3
"lib1","SARS-CoV-2","TCTAATCTCAATCCTA",3,122.79,10.62,-0.15,0.07,2.95,1.03,0,"1 nonsynonymous","Y35I",1
"lib1","SARS-CoV-2","TCTAATGCAGATTTAC",13,12.4,6,-4.76,1.23,3,1.12,0.01,">1 nonsynonymous","T15L V37Y V103Q K132T",4
"lib1","SARS-CoV-2","TCTAATGCCAAGAGTA",1,39.54,10.46,-0.31,0.06,2.86,1.05,0,">1 nonsynonymous","R27E L60T",2
"lib1","SARS-CoV-2","TCTAATGCTGAAAGCG",5,20.39,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","Y93F F99N N107I",3
"lib1","SARS-CoV-2","TCTAATGGAAAAAGAT",7,45.68,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9L S69P K114P K128S",4
"lib1","SARS-CoV-2","TCTAATGTGATGTACC",3,3.62,NA,NA,NA,NA,NA,NA,"stop","A18* S129L",2
"lib1","SARS-CoV-2","TCTAATTAAAGACGAA",6,29.5,6.64,-4.12,0.41,1.5,1.11,0.03,">1 nonsynonymous","F8G G146L K198W",3
"lib1","SARS-CoV-2","TCTAATTAAAGTACCA",2,57.67,6,-4.76,1.71,1.5,1.15,0.01,">1 nonsynonymous","N120E T140L N157E Y165D",4
"lib1","SARS-CoV-2","TCTAATTAACATAAAG",10,244.48,10.69,-0.08,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAATTAATCAAAAT",3,99.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L38C L131E S139R",3
"lib1","SARS-CoV-2","TCTAATTATATTTCGA",6,2,NA,NA,NA,NA,NA,NA,"stop","S45K C49Y D98M V173S V182*",5
"lib1","SARS-CoV-2","TCTAATTCAATGTCCA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","K48C A105*",2
"lib1","SARS-CoV-2","TCTAATTCAGCAGCAA",4,140.55,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R16I G172V Q176V",3
"lib1","SARS-CoV-2","TCTAATTCCTACATTC",1,14.73,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D68E P133G F167D",3
"lib1","SARS-CoV-2","TCTAATTCTTATACCC",5,1.09,NA,NA,NA,NA,NA,NA,"stop","Y93A G155*",2
"lib1","SARS-CoV-2","TCTACAAAACTCTAGA",7,63.7,8.67,-2.1,0.09,2.67,1.15,0,">1 nonsynonymous","L5T T100Q Q144N G174I",4
"lib1","SARS-CoV-2","TCTACAAACCCCGCGA",2,79.27,10.03,-0.73,0.11,2.13,1.05,0,"1 nonsynonymous","I28N",1
"lib1","SARS-CoV-2","TCTACAAATACAAAAC",6,46.93,10.23,-0.53,0.06,2.85,1,0,">1 nonsynonymous","E10N F62S",2
"lib1","SARS-CoV-2","TCTACAAATTTTTGGG",7,20.2,7.27,-3.5,0.48,1.5,1.02,0.05,">1 nonsynonymous","P96Q N107V Y123S N171S F185P",5
"lib1","SARS-CoV-2","TCTACAACAATCGCTA",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G K56T K94Q F99Y Y143T A190G",6
"lib1","SARS-CoV-2","TCTACAACGCCGATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40F Y91L D98L Y175*",4
"lib1","SARS-CoV-2","TCTACAAGAGAATGTT",6,28.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5Y I28E I104P R127L G174V",5
"lib1","SARS-CoV-2","TCTACAAGGTCACTCA",9,138.61,10.7,-0.07,0.06,2.91,1.05,0,"1 nonsynonymous","V173N",1
"lib1","SARS-CoV-2","TCTACAAGTACCTTCC",2,34.35,8.3,-2.47,0.26,1.5,1.15,0.03,">1 nonsynonymous","D98M N120I Q176N",3
"lib1","SARS-CoV-2","TCTACAATAATTTGGA",2,19.47,10.53,-0.23,0.09,2.93,1.03,0,">1 nonsynonymous","K87N S200Q",2
"lib1","SARS-CoV-2","TCTACAATAGAATGGT",3,2.48,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","TCTACAATATACCGCG",7,84.46,10.83,0.07,0.11,2.85,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACACATATATTCA",8,195.71,9.83,-0.93,0.06,2.84,1.04,0,">1 nonsynonymous","G74R V173I",2
"lib1","SARS-CoV-2","TCTACACCAAGTACAA",1,6.45,9.62,-1.14,0.31,2.78,1.02,0.01,">1 nonsynonymous","F8L G9M G155C",3
"lib1","SARS-CoV-2","TCTACACTAATCCAAA",4,76.25,10,-0.77,0.08,2.42,1.06,0,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","TCTACACTCCTTGAAA",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125C I138D",2
"lib1","SARS-CoV-2","TCTACACTCGTTTACG",5,182.23,10.2,-0.56,0.06,2.54,1.01,0,">1 nonsynonymous","I80L Q84H",2
"lib1","SARS-CoV-2","TCTACACTCTTTAGCG",6,97.04,10.72,-0.04,0.06,2.93,1.05,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","TCTACACTTAACCTTT",4,1.19,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TCTACAGAAGTATTAG",3,34.32,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","S45Y T55D Q163S R179G",4
"lib1","SARS-CoV-2","TCTACAGACACGACCA",4,41.84,9.69,-1.08,0.06,2.85,1.1,0,"1 nonsynonymous","N109T",1
"lib1","SARS-CoV-2","TCTACAGACGCATTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S Y91V C158L L183C",4
"lib1","SARS-CoV-2","TCTACAGAGACATAAG",4,26.42,6,-4.76,1.97,1.5,1.25,0.03,">1 nonsynonymous","N58C V103R S113A G152F",4
"lib1","SARS-CoV-2","TCTACAGATACCACAG",3,18.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49I R136D",2
"lib1","SARS-CoV-2","TCTACAGGTTCAGACA",7,38.76,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V52S F99M N107S R127K",4
"lib1","SARS-CoV-2","TCTACAGTAGAGCAAT",6,59.89,6,-4.76,1.66,1.5,1.28,0.03,">1 nonsynonymous","N64R A89L",2
"lib1","SARS-CoV-2","TCTACAGTATATTTCG",13,126.19,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7Q D112R P169L",3
"lib1","SARS-CoV-2","TCTACAGTTATAAAAA",5,109.08,10.75,-0.01,0.06,2.93,1.04,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","TCTACATATAAGAAAC",4,25.89,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","R27W T63M D112K L122R",4
"lib1","SARS-CoV-2","TCTACATCCGGTAACT",3,17.32,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","T15I V37A K56C Q84R N107K T201W",6
"lib1","SARS-CoV-2","TCTACATGAAATGCGA",9,160.91,9.7,-1.07,0.04,2.88,1.06,0,"1 nonsynonymous","N157D",1
"lib1","SARS-CoV-2","TCTACATTACTTGAAT",1,22.54,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K26E C102D P197S",3
"lib1","SARS-CoV-2","TCTACATTTCTTGGGC",5,102.76,10.13,-0.64,0.08,2.52,1,0,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","TCTACCAACATGAAAA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","N13* Y39Q A105N D112R",4
"lib1","SARS-CoV-2","TCTACCAACGAGTAAC",4,0.07,NA,NA,NA,NA,NA,NA,"stop","A18V T55A D90C F156L P177*",5
"lib1","SARS-CoV-2","TCTACCAATTCCGCTT",8,129.79,9.2,-1.56,0.04,2.84,1.1,0,">1 nonsynonymous","G9V I28W D75Y Y119N",4
"lib1","SARS-CoV-2","TCTACCAGCTCAATCA",1,12.23,10.1,-0.67,0.3,1.72,1.05,0.03,">1 nonsynonymous","F12S N120Q",2
"lib1","SARS-CoV-2","TCTACCAGGCTAGAAC",2,10.87,10.65,-0.11,0.19,2.54,1.03,0.02,">1 nonsynonymous","A42W A105S",2
"lib1","SARS-CoV-2","TCTACCCACTGTATGA",2,84.35,10.08,-0.69,0.09,2.72,1.07,0,">1 nonsynonymous","L5E Y91W",2
"lib1","SARS-CoV-2","TCTACCCCACCATTAA",3,9.28,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y35L C49D T55N F167A",4
"lib1","SARS-CoV-2","TCTACCCCCGTCAAAC",7,187.96,8.48,-2.28,0.12,2.54,1.11,0.01,">1 nonsynonymous","A33Y Y159V",2
"lib1","SARS-CoV-2","TCTACCCGGACAAATT",10,126.25,10.74,-0.03,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACCCTGACTCCGC",1,31.84,8.51,-2.25,0.18,1.82,1.09,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","TCTACCCTTTATAAGG",1,3.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","TCTACCGAGTTCATAC",6,166.95,10.77,0.01,0.05,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACCGTATTTCCGA",1,84.38,10.31,-0.45,0.06,2.79,1.06,0,">1 nonsynonymous","F12V G152D",2
"lib1","SARS-CoV-2","TCTACCTATTACGCGT",6,1.69,NA,NA,NA,NA,NA,NA,"stop","V32A Y39* D75E N92I N130V E141I H189I",7
"lib1","SARS-CoV-2","TCTACCTCCAATTCAA",9,2.16,NA,NA,NA,NA,NA,NA,"stop","A33* D59G P149Y P197T",4
"lib1","SARS-CoV-2","TCTACCTCGTAGACCC",3,43.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D C61K K87S W106C",4
"lib1","SARS-CoV-2","TCTACCTTGTAGCTTC",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q G117L V182P",3
"lib1","SARS-CoV-2","TCTACCTTTCCTATTA",5,2.41,NA,NA,NA,NA,NA,NA,"stop","F8* N107K N151D",3
"lib1","SARS-CoV-2","TCTACGAAAGTCTTAA",1,13.66,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N1F A18T D90R F99W Y121N",5
"lib1","SARS-CoV-2","TCTACGACGCTTTCCA",1,46.92,10.86,0.09,0.08,2.84,1.05,0,">1 nonsynonymous","S36D T140R N151L",3
"lib1","SARS-CoV-2","TCTACGACTATGAGAG",9,188.41,10.76,-0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACGAGACTAATCA",2,13.19,8.28,-2.48,0.14,2.6,1.05,0.01,">1 nonsynonymous","R27K N157V",2
"lib1","SARS-CoV-2","TCTACGAGATTGTATG",2,0.72,NA,NA,NA,NA,NA,NA,"stop","G86K N120* G155F",3
"lib1","SARS-CoV-2","TCTACGATATAATGAG",1,16.14,8.76,-2.01,0.29,1.5,1.06,0.03,">1 nonsynonymous","A18R F62K T100S",3
"lib1","SARS-CoV-2","TCTACGATTTGCTAGA",4,25.94,10.8,0.03,0.06,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACGCAAATGTACA",1,14.36,10.06,-0.7,0.14,2.79,1.05,0.01,">1 nonsynonymous","F44D N151P",2
"lib1","SARS-CoV-2","TCTACGCAAGTCCACA",8,37.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S T100N R136F C158I",4
"lib1","SARS-CoV-2","TCTACGCTACTCTCTA",15,102.41,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R127W G174Y",2
"lib1","SARS-CoV-2","TCTACGGTAAGTCCAG",3,67.65,10.17,-0.59,0.07,2.66,1.06,0,">1 nonsynonymous","W23Y S41T P149V",3
"lib1","SARS-CoV-2","TCTACGGTCCACACTA",5,2.71,NA,NA,NA,NA,NA,NA,"stop","V77A K87* D97L N107F S200*",5
"lib1","SARS-CoV-2","TCTACGGTTACAACTG",3,63.82,10.31,-0.46,0.06,2.83,1.08,0,">1 nonsynonymous","L95V T140F",2
"lib1","SARS-CoV-2","TCTACGTGCTCACTAG",2,8.01,6,-4.76,2,3,1.1,0,">1 nonsynonymous","A14Y S29F K56T N92K G155S",5
"lib1","SARS-CoV-2","TCTACTAAAATGTTCA",3,38.45,10.23,-0.54,0.04,2.97,1,0,">1 nonsynonymous","F62Y K114S P133S",3
"lib1","SARS-CoV-2","TCTACTAAACCAAAGG",5,46.19,10.65,-0.11,0.14,2.9,1.06,0.01,">1 nonsynonymous","V115L V173R",2
"lib1","SARS-CoV-2","TCTACTAATAATTGCT",4,1.58,NA,NA,NA,NA,NA,NA,"stop","G116* Y175* T201L",3
"lib1","SARS-CoV-2","TCTACTAATACAGTCG",2,51.34,10.47,-0.29,0.07,2.85,1.11,0,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","TCTACTACAAGCTTTA",4,129.54,9.36,-1.41,0.09,2.47,1.09,0,">1 nonsynonymous","G9S Q84S Y91F Y165H",4
"lib1","SARS-CoV-2","TCTACTAGACCAACAT",3,19.25,10.64,-0.13,0.06,2.91,1.02,0,">1 nonsynonymous","I2V E141V",2
"lib1","SARS-CoV-2","TCTACTAGATTTCTAA",5,54.78,9.3,-1.47,0.08,2.82,1.13,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","TCTACTAGCTAACAGT",2,165.36,10.03,-0.73,0.05,2.81,1.01,0,">1 nonsynonymous","F8L D98I G174K",3
"lib1","SARS-CoV-2","TCTACTATTAGGATTA",6,60.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179Q",1
"lib1","SARS-CoV-2","TCTACTCAAATTCAGC",3,0.47,NA,NA,NA,NA,NA,NA,"stop","I80V K132T V153M Q163* V173A",5
"lib1","SARS-CoV-2","TCTACTCAGGTCCGGT",1,35.18,9.8,-0.96,0.12,2.23,1.02,0.01,">1 nonsynonymous","S19M G196R",2
"lib1","SARS-CoV-2","TCTACTCATGGTTACA",11,97.17,10.69,-0.08,0.03,2.93,1.02,0,">1 nonsynonymous","T100N K114R P149D",3
"lib1","SARS-CoV-2","TCTACTCTCTAAATAG",2,34.56,10.85,0.08,0.06,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTACTCTTAACTTAG",5,335.82,10.43,-0.34,0.03,2.9,1.02,0,">1 nonsynonymous","S45A K132Y",2
"lib1","SARS-CoV-2","TCTACTGAAAAAAACG",2,75.11,9.84,-0.93,0.11,1.91,1.1,0,">1 nonsynonymous","C31T D98T S108T P197L",4
"lib1","SARS-CoV-2","TCTACTGACGAATTCA",9,53.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W106P N151L T201M",3
"lib1","SARS-CoV-2","TCTACTGAGATGATAA",15,150.25,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86M N130S Y143S",3
"lib1","SARS-CoV-2","TCTACTGAGGATATCC",2,6.62,8.55,-2.21,0.27,2.71,1.13,0.02,">1 nonsynonymous","N92L D97N G155I Q176H",4
"lib1","SARS-CoV-2","TCTACTGCTCAGACCC",2,56.94,10.03,-0.73,0.04,2.89,1.04,0,"1 nonsynonymous","Q144Y",1
"lib1","SARS-CoV-2","TCTACTGTGCCTTACC",3,9.25,6.8,-3.97,0.63,2.26,1,0.07,">1 nonsynonymous","A33S I88P S113M",3
"lib1","SARS-CoV-2","TCTACTTAATAAGATA",6,0,NA,NA,NA,NA,NA,NA,"stop","I72V Q79E S113* Y119E V153Y",5
"lib1","SARS-CoV-2","TCTACTTAGACGAGAA",6,52.66,9.52,-1.25,0.16,1.81,1.14,0.01,">1 nonsynonymous","L38S N40K T85S",3
"lib1","SARS-CoV-2","TCTACTTATCTTCCAC",6,78.55,10.75,-0.02,0.04,2.95,1.01,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TCTACTTCAAGCTTAA",4,49.01,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V71K Q176K",2
"lib1","SARS-CoV-2","TCTACTTCCTATGCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","W23A K48* K56G E141Y",4
"lib1","SARS-CoV-2","TCTACTTCTCACGCAA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","T46F L95* R127S F134Y F156*",5
"lib1","SARS-CoV-2","TCTACTTGAGATCAAA",1,24.65,9.5,-1.26,0.16,2.53,1.16,0.01,">1 nonsynonymous","D98S N118V",2
"lib1","SARS-CoV-2","TCTACTTGCTATAATG",5,54.55,10.62,-0.15,0.09,2.96,1.04,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","TCTACTTTAAATAATA",6,31.24,6,-4.76,1.43,1.5,1.21,0.03,">1 nonsynonymous","F44P F99T N157P",3
"lib1","SARS-CoV-2","TCTACTTTATAGGCTA",2,0.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","TCTAGAAAAAAACGAT",4,89.51,10.76,-0.01,0.05,2.94,1.03,0,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","TCTAGAAAATACCTCT",1,3.59,NA,NA,NA,NA,NA,NA,"stop","W106K S113*",2
"lib1","SARS-CoV-2","TCTAGAAAGACCCTTA",4,45.61,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","F12L S53N D112S R136L Y143I",5
"lib1","SARS-CoV-2","TCTAGAACAATATCAT",4,171.18,10.21,-0.55,0.05,2.5,1.02,0,">1 nonsynonymous","L122G R136W",2
"lib1","SARS-CoV-2","TCTAGAACATCGCATC",1,35.03,10.34,-0.42,0.07,2.85,1.05,0,">1 nonsynonymous","G9L R78T",2
"lib1","SARS-CoV-2","TCTAGAACCCAAAACA",1,16.28,10.75,-0.01,0.08,2.88,1,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","TCTAGAACGCTCAAAA",1,15.98,10.82,0.06,0.12,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAGAAGAAATACAA",7,1.56,NA,NA,NA,NA,NA,NA,"stop","Y178P K199*",2
"lib1","SARS-CoV-2","TCTAGAAGTCAAACAT",8,148,9.47,-1.3,0.12,1.82,1.11,0,">1 nonsynonymous","D112I K132V F160A",3
"lib1","SARS-CoV-2","TCTAGAATAGACGCGG",2,41.55,10.13,-0.63,0.06,2.88,1,0,">1 nonsynonymous","A89S I142F",2
"lib1","SARS-CoV-2","TCTAGAATAGGTACTC",9,27.14,6,-4.76,2,1.5,1.13,0.06,">1 nonsynonymous","S19I Y50R T100S G101V A105D G116W L131F",7
"lib1","SARS-CoV-2","TCTAGACAAAATTCTT",5,44.51,8.82,-1.95,0.1,1.78,1.12,0,">1 nonsynonymous","T55L V71T N107A S129R",4
"lib1","SARS-CoV-2","TCTAGACAAGACAGCA",3,46.96,6,-4.76,1.95,1.5,1.25,0.02,">1 nonsynonymous","S36M L60K S69R L95G",4
"lib1","SARS-CoV-2","TCTAGACACAAGTTCC",7,85.37,10.89,0.13,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAGACCATGCCCAA",6,55.48,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K56I A67V T85I K94V Q144L C158F",6
"lib1","SARS-CoV-2","TCTAGACCCCATGAGG",2,29.45,10.3,-0.46,0.13,2.04,1,0.01,">1 nonsynonymous","N58R T85Q P133Y",3
"lib1","SARS-CoV-2","TCTAGACGTGGCAATG",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T A14V S41R P82T N92D W106Y Y121L",7
"lib1","SARS-CoV-2","TCTAGACGTTTGCAGG",5,551.69,10.08,-0.68,0.04,2.82,1,0,">1 nonsynonymous","F44C N130R N151D",3
"lib1","SARS-CoV-2","TCTAGACTGCTTTACT",1,11.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49A G166M",2
"lib1","SARS-CoV-2","TCTAGAGAATCTACCT",2,54.17,10.61,-0.15,0.05,3,1,0,"1 nonsynonymous","G116D",1
"lib1","SARS-CoV-2","TCTAGAGAGGGATCCG",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27P G51L F134S",3
"lib1","SARS-CoV-2","TCTAGAGGTAGTGAGA",1,14.56,10.2,-0.57,0.15,2.23,1.02,0.01,">1 nonsynonymous","V37K W106S K198M",3
"lib1","SARS-CoV-2","TCTAGAGTATAGCAAT",1,21.11,9.55,-1.22,0.15,2.16,1.06,0.01,">1 nonsynonymous","L38T T55S F62Y",3
"lib1","SARS-CoV-2","TCTAGAGTTCGAATAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","TCTAGATATAACTTAC",4,97.56,6,-4.76,2,1.5,1.17,0,">1 nonsynonymous","G9F Y35H E154F Y175C",4
"lib1","SARS-CoV-2","TCTAGATGATAGACAA",2,50.87,8.6,-2.16,0.12,2.57,1.08,0.01,"1 nonsynonymous","S113F",1
"lib1","SARS-CoV-2","TCTAGCAAAATCACTC",8,83.98,9.73,-1.04,0.11,2.37,1.05,0,">1 nonsynonymous","N4V D97C V115T G152Q",4
"lib1","SARS-CoV-2","TCTAGCAAACTTTCGG",4,25.73,6,-4.76,2,1.5,1.28,0.06,">1 nonsynonymous","V65P W106V",2
"lib1","SARS-CoV-2","TCTAGCAAGAAGTACT",2,78.38,10.69,-0.07,0.04,2.92,1.02,0,"1 nonsynonymous","F47M",1
"lib1","SARS-CoV-2","TCTAGCCACCAACCTT",9,29.42,6.31,-4.46,1.36,1.5,1.26,0.05,">1 nonsynonymous","N13L T85I L95M F99Q R136S",5
"lib1","SARS-CoV-2","TCTAGCCCTCGTTAAC",2,20.47,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5W S139N C150M F167M S200V",5
"lib1","SARS-CoV-2","TCTAGCCCTTACTATA",6,1.33,NA,NA,NA,NA,NA,NA,"stop","N109T F156*",2
"lib1","SARS-CoV-2","TCTAGCCGCTTGCGGA",3,15.03,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N64V G74M P96F",3
"lib1","SARS-CoV-2","TCTAGCCTACATTAAA",1,24.95,10.63,-0.14,0.04,2.96,1,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","TCTAGCGCGATGGATG",6,21.24,10.07,-0.69,0.12,1.99,1.08,0.01,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","TCTAGCTACAAGTCGC",10,157,6.67,-4.09,0.34,1.5,1.25,0.02,">1 nonsynonymous","A42C C158S",2
"lib1","SARS-CoV-2","TCTAGCTATACGAACG",3,48.28,10.71,-0.06,0.07,2.96,1.02,0,">1 nonsynonymous","T100Y T148Y",2
"lib1","SARS-CoV-2","TCTAGCTTTTTAATTC",3,53.53,9.41,-1.35,0.08,2.8,1.07,0,">1 nonsynonymous","E135G T170F",2
"lib1","SARS-CoV-2","TCTAGGAACTACACGA",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130S I142A Y159G",3
"lib1","SARS-CoV-2","TCTAGGACCGCACAGG",1,23.61,10.2,-0.57,0.07,2.89,1.06,0,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","TCTAGGATTCCAACAC",2,11.71,10.08,-0.68,0.06,2.99,1.01,0,">1 nonsynonymous","G9R D59Q G155S",3
"lib1","SARS-CoV-2","TCTAGGCAGGGGAGTT",3,46.71,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","N58L Y91Q S113K Y178D",4
"lib1","SARS-CoV-2","TCTAGGCCCCGCCTTT",3,30.74,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V77R P82M L95R Q176M V180I",5
"lib1","SARS-CoV-2","TCTAGGCGTGGCGTCA",11,117.1,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","R73S G86D Y121T F134T T170K",5
"lib1","SARS-CoV-2","TCTAGGCTCCTGACAA",1,13.97,10.43,-0.33,0.15,2.74,1.14,0.01,">1 nonsynonymous","A33L G116I",2
"lib1","SARS-CoV-2","TCTAGGGAATTCAAGC",1,24.89,10.13,-0.63,0.06,2.94,1,0,">1 nonsynonymous","D90R G116V",2
"lib1","SARS-CoV-2","TCTAGGGATAATGATG",3,46.5,10.74,-0.03,0.08,2.88,1,0,">1 nonsynonymous","A33V T140E",2
"lib1","SARS-CoV-2","TCTAGGTGCACTCATG",6,78.19,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A81C N92Q I104P R179M K198G",5
"lib1","SARS-CoV-2","TCTAGTACAAAAAATT",4,88.86,9.75,-1.01,0.03,2.82,1.06,0,">1 nonsynonymous","L60P K87C K128S",3
"lib1","SARS-CoV-2","TCTAGTACAAAATATG",1,29.61,10.58,-0.19,0.09,2.9,1.09,0,"1 nonsynonymous","N120Y",1
"lib1","SARS-CoV-2","TCTAGTACAACAAAGT",3,7.16,6.36,-4.4,0.41,3,1.11,0.01,">1 nonsynonymous","I72G K87S",2
"lib1","SARS-CoV-2","TCTAGTACCACGAGGC",5,63.18,10.79,0.03,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTAGTACCACTTCTT",2,20.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G9W A18T I28R D34G Y143M S147Q P169D",7
"lib1","SARS-CoV-2","TCTAGTACTTCTCATA",7,174.59,9.14,-1.62,0.05,2.87,1.11,0,">1 nonsynonymous","N64F K114T G166I K198M",4
"lib1","SARS-CoV-2","TCTAGTCAACTGCAAT",7,55.2,6.47,-4.3,0.59,1.5,1.26,0.03,">1 nonsynonymous","V37L S43L R73T G116R L122Q R136A",6
"lib1","SARS-CoV-2","TCTAGTCATGGCCCAT",5,48.19,10.82,0.05,0.08,2.88,1.08,0,">1 nonsynonymous","I2A Y39F",2
"lib1","SARS-CoV-2","TCTAGTCGAAGATATG",4,67.85,10.04,-0.72,0.07,2.81,1.05,0,">1 nonsynonymous","T3S T15Y C61R K87T",4
"lib1","SARS-CoV-2","TCTAGTCTAAGATGAC",2,62.3,10.74,-0.02,0.07,2.94,1.03,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","TCTAGTGCAAGAACCT",14,109.58,6.31,-4.45,0.78,1.5,1.26,0.04,">1 nonsynonymous","S69G P96S P161Q G196M T201M",5
"lib1","SARS-CoV-2","TCTAGTGCAGCAGTTA",2,58.51,6.34,-4.43,0.53,1.5,1.18,0.01,">1 nonsynonymous","T55N R124G N157W",3
"lib1","SARS-CoV-2","TCTAGTGCGATTTGGT",2,7.47,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","L38T G51S N107S N151V",4
"lib1","SARS-CoV-2","TCTAGTGTTCCAGTTG",1,11.53,6,-4.76,2,3,1.08,0,">1 nonsynonymous","I28P G174V S200N",3
"lib1","SARS-CoV-2","TCTAGTTCCAAAGTAT",1,22.68,7.54,-3.22,0.32,1.5,1.14,0.03,">1 nonsynonymous","D90R S139T Y165L",3
"lib1","SARS-CoV-2","TCTAGTTCTTACAAGC",3,11.21,6,-4.76,2,3,1.02,0,">1 nonsynonymous","A14R W23L V77Y",3
"lib1","SARS-CoV-2","TCTAGTTTGAATGAAT",3,49.88,10.64,-0.13,0.07,2.9,1.09,0,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","TCTAGTTTTTCAATGA",4,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D N13P F99P N120H A145S V182P",6
"lib1","SARS-CoV-2","TCTATAAAACTAAGGT",1,20.85,10.83,0.07,0.1,2.93,1,0,">1 nonsynonymous","Q163S T201Y",2
"lib1","SARS-CoV-2","TCTATAAAATAAAAAG",3,6.36,7.36,-3.41,0.27,1.5,1.01,0.02,">1 nonsynonymous","D59A Q144S C150E",3
"lib1","SARS-CoV-2","TCTATAAAATTAAATA",4,39.51,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","S41M F99K",2
"lib1","SARS-CoV-2","TCTATAAAGAAATAGG",2,0.69,NA,NA,NA,NA,NA,NA,"stop","S41A P54C Y91* W106L E141Y G166M",6
"lib1","SARS-CoV-2","TCTATAAAGGATTAGA",13,117.8,9.48,-1.29,0.13,1.65,1.23,0.01,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","TCTATAAATAATCCAT",4,41.21,9.73,-1.03,0.13,1.96,1.12,0.01,">1 nonsynonymous","G51T D59F N130A T201I",4
"lib1","SARS-CoV-2","TCTATAAATTATCAAT",3,61.56,10.39,-0.38,0.06,2.77,1.03,0,">1 nonsynonymous","F44D N120R N130M",3
"lib1","SARS-CoV-2","TCTATAAATTTTTGGC",1,14.4,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A18N L122G G146L Y165K",4
"lib1","SARS-CoV-2","TCTATAACAATCCCTC",6,35.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C K26W S45A Y50K P96W T148L",6
"lib1","SARS-CoV-2","TCTATAACAGTTTCCC",6,31.2,6,-4.76,2,3,1.09,0,">1 nonsynonymous","G9P Y66M K87C D97S Y123T",5
"lib1","SARS-CoV-2","TCTATAACCACAACAT",4,15.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S41I F47A V71L N120T",4
"lib1","SARS-CoV-2","TCTATAACGAGATTGG",4,84.88,10.76,0,0.08,2.87,1.08,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","TCTATAACGATTCCCG",1,20.87,7.03,-3.74,0.37,1.5,1.08,0.03,">1 nonsynonymous","E10S P82K Y93P L122P Q168C",5
"lib1","SARS-CoV-2","TCTATAACTTTAAAAT",1,1.46,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TCTATAAGAAGGCGCA",2,165.27,10.24,-0.53,0.07,2.73,1.01,0,">1 nonsynonymous","T3R E10C",2
"lib1","SARS-CoV-2","TCTATAAGGCTAACGA",5,85.04,9.94,-0.82,0.11,1.85,1.07,0,">1 nonsynonymous","F8T Q163C",2
"lib1","SARS-CoV-2","TCTATAATAGATAAAC",4,40.48,10.15,-0.62,0.09,2.84,1.01,0,">1 nonsynonymous","A42S R78W D97C",3
"lib1","SARS-CoV-2","TCTATAATAGCGTATT",3,101.5,10.62,-0.15,0.05,2.95,1,0,"1 nonsynonymous","Q144M",1
"lib1","SARS-CoV-2","TCTATAATAGTTGTCA",4,67.92,10.5,-0.27,0.04,2.9,1.03,0,">1 nonsynonymous","V65L F134S",2
"lib1","SARS-CoV-2","TCTATAATTAACTAAC",3,59.66,10.14,-0.63,0.05,2.91,1.02,0,"1 nonsynonymous","Q176M",1
"lib1","SARS-CoV-2","TCTATAATTTCAACGA",3,47.19,10.17,-0.6,0.07,2.86,1.05,0,"1 nonsynonymous","N118T",1
"lib1","SARS-CoV-2","TCTATACAACAATGTT",2,55.64,10.44,-0.33,0.07,2.86,1.05,0,">1 nonsynonymous","T3Y T85I",2
"lib1","SARS-CoV-2","TCTATACAGCTAATAA",11,97.99,6,-4.76,0.83,1.5,1.12,0.01,">1 nonsynonymous","L125F C150Q Y159V",3
"lib1","SARS-CoV-2","TCTATACATGTATGAG",2,25.46,7.59,-3.18,0.2,2,1.12,0.02,">1 nonsynonymous","D59T N64Q G117N G155S G174L",5
"lib1","SARS-CoV-2","TCTATACCAGAGCTAA",13,70.86,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G86K S139Y F167M H189D",4
"lib1","SARS-CoV-2","TCTATACCCACAGTAG",5,81.38,10.75,-0.02,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTATACCCTCCGGTA",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L W106R N120S G146F",4
"lib1","SARS-CoV-2","TCTATACCGAGTTTAC",4,1.57,NA,NA,NA,NA,NA,NA,"stop","P54* R73S",2
"lib1","SARS-CoV-2","TCTATACCTGAGGTTA",1,27.98,8.43,-2.34,0.21,1.5,1.04,0.01,">1 nonsynonymous","S113A L162K",2
"lib1","SARS-CoV-2","TCTATACTAGTACATG",2,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R Y50S G117S N130V",4
"lib1","SARS-CoV-2","TCTATACTCGATCCAG",3,19.21,7.95,-2.82,0.5,1.51,1.16,0.08,">1 nonsynonymous","F12A L125N Y143I",3
"lib1","SARS-CoV-2","TCTATACTGGTCACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q N107I",2
"lib1","SARS-CoV-2","TCTATAGATTTGCATA",1,7.35,6,-4.76,2,3,1.13,0,">1 nonsynonymous","F17G L38W E76G P82N P96T L122P",6
"lib1","SARS-CoV-2","TCTATAGCAACACATA",1,21,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","I28R Y175K",2
"lib1","SARS-CoV-2","TCTATAGTAAAAACAC",4,40.94,8.14,-2.62,0.19,1.5,1.12,0.01,">1 nonsynonymous","N13M V37Y S43L Y121S",4
"lib1","SARS-CoV-2","TCTATAGTATATTATT",1,13.94,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6L D59Q V103Q Y121V",4
"lib1","SARS-CoV-2","TCTATAGTTTGATATG",2,49.77,8.5,-2.27,0.28,1.5,1.06,0.04,">1 nonsynonymous","G9E A81F Y119F G155S",4
"lib1","SARS-CoV-2","TCTATATACGTTATCT",3,17.95,10.5,-0.27,0.06,2.89,1.06,0,">1 nonsynonymous","E10T K56G",2
"lib1","SARS-CoV-2","TCTATATACTAAAATA",3,16.26,6,-4.76,2,3,1.39,0.02,">1 nonsynonymous","P96M N107T E135Y Q163V",4
"lib1","SARS-CoV-2","TCTATATAGTATGTAT",4,64.7,10.71,-0.06,0.05,2.91,1.03,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","TCTATATCAACAACAA",7,199.67,10.11,-0.65,0.05,2.76,1.01,0,"1 nonsynonymous","Y21T",1
"lib1","SARS-CoV-2","TCTATATTATAATATG",11,21.54,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14Y C49R T85S G101D N107A Y119M",6
"lib1","SARS-CoV-2","TCTATATTGTGTTGAA",3,42.02,10.78,0.02,0.07,2.94,1.05,0,">1 nonsynonymous","L5T R16W",2
"lib1","SARS-CoV-2","TCTATATTTTACTAGT",1,31.41,8.38,-2.38,0.16,1.99,1.1,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","TCTATCAATCAAAGAG",3,6.2,NA,NA,NA,NA,NA,NA,"stop","F12* N30L P54S Y119P",4
"lib1","SARS-CoV-2","TCTATCACTAGCATGT",6,40.04,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","I28T Y35V K87W D97Q V103T T148N K198Q",7
"lib1","SARS-CoV-2","TCTATCACTAGTTTGA",3,1.04,NA,NA,NA,NA,NA,NA,"stop","Y50* C61K G83D L122M",4
"lib1","SARS-CoV-2","TCTATCAGATTCGATA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","C6G L38C C49* K87D L95K G146L Y178A",7
"lib1","SARS-CoV-2","TCTATCAGCGCAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88S N109K",2
"lib1","SARS-CoV-2","TCTATCAGTGTGCGCA",1,15.23,6,-4.76,2,3,1.17,0,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","TCTATCATAAACAAAA",1,9.59,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A89K K114F R136L",3
"lib1","SARS-CoV-2","TCTATCATGAACACAA",7,251.54,8.69,-2.07,0.09,2.16,1.11,0,"1 nonsynonymous","Q176W",1
"lib1","SARS-CoV-2","TCTATCATTAGCACAT",4,5.84,10.65,-0.11,0.04,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTATCATTCCTAATA",5,50.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W L95K N157I",3
"lib1","SARS-CoV-2","TCTATCCAAAGGTGCA",4,60.77,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F12D I138L Y175K L183Y",4
"lib1","SARS-CoV-2","TCTATCCACTACATAT",4,69.49,10.67,-0.1,0.05,2.96,1.02,0,"1 nonsynonymous","F8M",1
"lib1","SARS-CoV-2","TCTATCCCAAATACCA",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K S36N T85S",3
"lib1","SARS-CoV-2","TCTATCCCTAATGCTA",2,26.61,10.77,0,0.09,2.86,1,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","TCTATCCGCTAGCACT",3,0,NA,NA,NA,NA,NA,NA,"stop","C102* G152L K199S",3
"lib1","SARS-CoV-2","TCTATCCTAAACATCA",12,62.93,7.39,-3.37,0.21,1.5,1.13,0.01,">1 nonsynonymous","A42L C150S",2
"lib1","SARS-CoV-2","TCTATCGAGGTTGACT",3,81.43,6,-4.76,1.59,1.5,1.29,0.02,">1 nonsynonymous","Y35D Y143S G155C",3
"lib1","SARS-CoV-2","TCTATCGATTAACCTG",1,30.64,10.67,-0.09,0.03,2.97,1.02,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","TCTATCGCCCACGGTT",2,43.5,10.17,-0.59,0.05,2.87,1.03,0,">1 nonsynonymous","V32F I104C S129R",3
"lib1","SARS-CoV-2","TCTATCGTAGGTAACT",1,46.67,8.98,-1.78,0.15,1.77,1.15,0.01,">1 nonsynonymous","S19Q D98Y",2
"lib1","SARS-CoV-2","TCTATCTAAATTCTCC",1,50.59,9.96,-0.8,0.07,2.63,1.05,0,">1 nonsynonymous","N4H F44C",2
"lib1","SARS-CoV-2","TCTATCTAACCTGAAC",3,44.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I2A C31G D137M G155V T201E",5
"lib1","SARS-CoV-2","TCTATCTATAACCCCT",6,77.83,10.45,-0.31,0.06,2.78,1.11,0,">1 nonsynonymous","C61R R136M",2
"lib1","SARS-CoV-2","TCTATGAAGCACTCAG",1,80.63,10.53,-0.23,0.04,2.87,1.07,0,"1 nonsynonymous","A42I",1
"lib1","SARS-CoV-2","TCTATGAATTACCAGG",7,100.43,8.22,-2.55,0.14,1.62,1.11,0.01,">1 nonsynonymous","F62Y D98N A105M Y159L",4
"lib1","SARS-CoV-2","TCTATGACAAGTTACT",4,62.55,10.18,-0.58,0.1,2.65,1,0,"1 nonsynonymous","I104S",1
"lib1","SARS-CoV-2","TCTATGACATGCGAAT",4,32.14,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","N92Q G155V S200K",3
"lib1","SARS-CoV-2","TCTATGAGCGTATCGA",4,42.9,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","D90Y R136M E154N F167C",4
"lib1","SARS-CoV-2","TCTATGAGCTGAGAGG",4,62.23,10.74,-0.03,0.07,2.89,1.05,0,">1 nonsynonymous","N1T F62W P149D V194I",4
"lib1","SARS-CoV-2","TCTATGATCCACCGCT",5,102.18,9.43,-1.33,0.14,1.88,1.14,0.01,">1 nonsynonymous","G9W F47S K114M",3
"lib1","SARS-CoV-2","TCTATGCATAGGTTGT",1,26.04,8.58,-2.18,0.22,2.65,1.2,0.01,">1 nonsynonymous","G83Q K87V N157S",3
"lib1","SARS-CoV-2","TCTATGCCAATAAACT",3,46.24,8.43,-2.34,0.18,2,1.12,0.01,">1 nonsynonymous","D90Y K132M Q163D",3
"lib1","SARS-CoV-2","TCTATGCCTTAATGAC",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V A42H T170F P197Y",4
"lib1","SARS-CoV-2","TCTATGCGCTATCCTT",1,12.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A67H G117S G166L",3
"lib1","SARS-CoV-2","TCTATGCTAAATATAA",4,21.87,6.64,-4.12,0.72,1.5,1.22,0.08,">1 nonsynonymous","Y50V Y123S V153C",3
"lib1","SARS-CoV-2","TCTATGGCTAAAGTGT",4,104.23,10.75,-0.01,0.06,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTATGGGGAGTGCTT",6,33.6,6,-4.76,2,3,1.33,0.01,">1 nonsynonymous","F12D V103N R179M",3
"lib1","SARS-CoV-2","TCTATGGGTCAGCTGT",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D W23R D68T N118D E141S",5
"lib1","SARS-CoV-2","TCTATGGGTTATCTGC",2,0.77,NA,NA,NA,NA,NA,NA,"stop","C6I R27L S41R S53P Q84* N107I",6
"lib1","SARS-CoV-2","TCTATGGTCTTATTTT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97H V103E C150V",3
"lib1","SARS-CoV-2","TCTATGTCAAAGTCTT",4,30.05,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","A105L E141W",2
"lib1","SARS-CoV-2","TCTATGTCAACGAGAT",1,6.05,8.34,-2.43,0.34,1.75,1.1,0.05,">1 nonsynonymous","T100A G117P K132S",3
"lib1","SARS-CoV-2","TCTATGTCAATGTGAT",17,279.46,10.46,-0.31,0.03,2.87,1.01,0,">1 nonsynonymous","N130L Y178M",2
"lib1","SARS-CoV-2","TCTATGTCAGAATCGG",3,19.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112S K132S",2
"lib1","SARS-CoV-2","TCTATGTTACGCACAC",3,1.5,NA,NA,NA,NA,NA,NA,"stop","A18S V32Q Y93* P133L Y175F",5
"lib1","SARS-CoV-2","TCTATTAACTCCCAAC",6,48.04,10.1,-0.66,0.06,2.76,1.01,0,">1 nonsynonymous","L57R R78N",2
"lib1","SARS-CoV-2","TCTATTAGCAAGCAAA",1,22.42,6,-4.76,2,1.5,1.31,0.08,">1 nonsynonymous","L5F S29E Q84K F99R F156Y",5
"lib1","SARS-CoV-2","TCTATTATCAATGCAC",2,91.44,10.15,-0.61,0.07,2.45,1.02,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","TCTATTCAAAAAACTT",1,18.55,6.47,-4.3,0.33,2.51,1.14,0.01,"1 nonsynonymous","C150F",1
"lib1","SARS-CoV-2","TCTATTCAACCTAAAA",8,52.35,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","V71P Q84S K198R",3
"lib1","SARS-CoV-2","TCTATTCAAGAACACT",3,40.74,8.51,-2.25,0.16,2.33,1.11,0.01,">1 nonsynonymous","C6G L111V S139F",3
"lib1","SARS-CoV-2","TCTATTCAGAGGTCGT",3,23.78,7.19,-3.57,0.53,1.5,1.08,0.07,">1 nonsynonymous","N30S C49F N151S E154I",4
"lib1","SARS-CoV-2","TCTATTCATATCACCA",5,11.22,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","N13L F17G D90A L125G I138A T148S",6
"lib1","SARS-CoV-2","TCTATTCCAAACATCG",1,25.95,9.47,-1.29,0.2,1.7,1.17,0.02,">1 nonsynonymous","A89Y S147I",2
"lib1","SARS-CoV-2","TCTATTCCATACAACA",2,17.28,10.23,-0.54,0.14,2.08,1.07,0.01,">1 nonsynonymous","F47S T148M",2
"lib1","SARS-CoV-2","TCTATTCCGAGTTTTT",5,12.18,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F44S Y50L Q168T",3
"lib1","SARS-CoV-2","TCTATTCGTGACACTG",1,5.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107T N118C Q168G",3
"lib1","SARS-CoV-2","TCTATTCTATACCCCC",5,64.35,10.31,-0.45,0.08,2.76,1.01,0,">1 nonsynonymous","Y21M T55A",2
"lib1","SARS-CoV-2","TCTATTCTCCAAGTTA",4,36.65,10.23,-0.53,0.05,2.8,1.08,0,">1 nonsynonymous","N4S D34S",2
"lib1","SARS-CoV-2","TCTATTGAAACAGAAC",2,111.58,8.93,-1.83,0.21,1.5,1,0.02,">1 nonsynonymous","L38T S45L",2
"lib1","SARS-CoV-2","TCTATTGAACTCTCGT",3,43.02,7.44,-3.32,0.21,1.5,1.09,0.01,">1 nonsynonymous","D98V I142S G152F",3
"lib1","SARS-CoV-2","TCTATTGACGCATGAC",6,41.83,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G9E A42S S139V G152C G172L",5
"lib1","SARS-CoV-2","TCTATTGCTCACTAGA",6,4.25,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib1","SARS-CoV-2","TCTATTGGCTATCCTC",5,156.94,10.86,0.09,0.09,2.91,1,0,">1 nonsynonymous","I2C F160K",2
"lib1","SARS-CoV-2","TCTATTTTGATACAAT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","E10* F134D G196W",3
"lib1","SARS-CoV-2","TCTCAAAAACGAACGT",2,21.94,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I72P G83A Y123H S129M",4
"lib1","SARS-CoV-2","TCTCAAAACGTTCACA",3,74.68,10.74,-0.03,0.05,2.94,1.03,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","TCTCAAACAATGACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2T G9A A105*",3
"lib1","SARS-CoV-2","TCTCAAACTGACTTAA",5,19.69,10.57,-0.2,0.08,2.97,1,0,"1 nonsynonymous","Q144T",1
"lib1","SARS-CoV-2","TCTCAAAGCCTCTTAC",18,149.03,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31L N64V K87D K94Y D112Q",5
"lib1","SARS-CoV-2","TCTCAAATGCCTCCAA",4,27.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A67F N92A W106L N151K V182E",5
"lib1","SARS-CoV-2","TCTCAAATGTTGATGA",2,14.54,10.74,-0.03,0.12,2.82,1.14,0.01,"1 nonsynonymous","E141M",1
"lib1","SARS-CoV-2","TCTCAACAAATATGTC",9,78.26,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28K T46F G86T R127H",4
"lib1","SARS-CoV-2","TCTCAACACCTGTACC",2,63.36,9.52,-1.24,0.16,1.9,1.11,0.01,">1 nonsynonymous","Y39I Q84H D98C G196F",4
"lib1","SARS-CoV-2","TCTCAACAGTCAGTAC",2,23.83,10.75,-0.02,0.09,2.85,1.02,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","TCTCAACATCCTGGTA",6,45.75,6.2,-4.56,0.86,1.5,1.24,0.03,">1 nonsynonymous","S69R V181M",2
"lib1","SARS-CoV-2","TCTCAACGAACTCGAA",1,26.02,9.84,-0.92,0.15,2.53,1.03,0.01,">1 nonsynonymous","A14C G116V",2
"lib1","SARS-CoV-2","TCTCAACGCAACAAGG",4,25.64,6.75,-4.02,0.62,1.5,1.17,0.05,">1 nonsynonymous","G101Q R127L I142E",3
"lib1","SARS-CoV-2","TCTCAACTAGAACACA",5,47.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A22T L38P L57P I88M R127S",5
"lib1","SARS-CoV-2","TCTCAACTCAATCTAA",9,142.54,8.71,-2.05,0.1,2.92,1.07,0,">1 nonsynonymous","T3R V77L T170D",3
"lib1","SARS-CoV-2","TCTCAACTCGACACAA",6,23.86,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","T46R N107S D112W",3
"lib1","SARS-CoV-2","TCTCAAGAAAGTTGGG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A42M C49G V153*",3
"lib1","SARS-CoV-2","TCTCAAGCAAGCCTAA",2,19.57,6,-4.76,1.37,3,1.07,0,">1 nonsynonymous","A42V G86I G155L",3
"lib1","SARS-CoV-2","TCTCAAGGATTATATT",1,2.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","TCTCAATATAAAACAT",4,15.31,6.33,-4.44,0.32,1.5,1.09,0.01,">1 nonsynonymous","T46A G117I V173A V181K",4
"lib1","SARS-CoV-2","TCTCAATATTCCCGGA",4,59.26,10.66,-0.1,0.05,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCAATCCCTGAAAT",3,44.65,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5G A14L L57S N64Y I72D N120F Q144I F167E",8
"lib1","SARS-CoV-2","TCTCAATGGTGGCCAA",4,27.22,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","E10R Y35D V103W F156L",4
"lib1","SARS-CoV-2","TCTCAATGTTGGGTCT",2,34.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16S K48W R73M G86L D90T",5
"lib1","SARS-CoV-2","TCTCAATTGACATCTA",4,15.55,9.46,-1.31,0.22,2.46,1.05,0.01,">1 nonsynonymous","C6A A22N F44G",3
"lib1","SARS-CoV-2","TCTCACAAATAACGTT",6,81.06,10.14,-0.63,0.07,2.79,1.01,0,">1 nonsynonymous","D75C T85G",2
"lib1","SARS-CoV-2","TCTCACAATAGGAGGC",13,128.94,9.4,-1.37,0.13,1.82,1.13,0.01,">1 nonsynonymous","G9T A89M",2
"lib1","SARS-CoV-2","TCTCACAATTGGACAT",5,23.12,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3G A67R N120P Y143V",4
"lib1","SARS-CoV-2","TCTCACACAAGCTTTA",4,12.4,7.12,-3.65,0.36,1.5,1.18,0.02,">1 nonsynonymous","A33T Y93Q G166S R179S",4
"lib1","SARS-CoV-2","TCTCACACGCAAAATT",9,37.06,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S41F G51A G86D A105L E141S",5
"lib1","SARS-CoV-2","TCTCACATATTCGACC",2,0.41,NA,NA,NA,NA,NA,NA,"stop","L5S R16L F70L F156*",4
"lib1","SARS-CoV-2","TCTCACATGGGAATCA",3,54.72,10.01,-0.76,0.1,2.3,1.01,0,">1 nonsynonymous","V11F F47C",2
"lib1","SARS-CoV-2","TCTCACATTTCGCATA",13,132.9,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","K48S K94S G146K",3
"lib1","SARS-CoV-2","TCTCACATTTTTTGAC",1,15.25,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","A14R C31S C61Y D112E L125S P149L F160C G172D",8
"lib1","SARS-CoV-2","TCTCACCAGAAAATCA",2,32.42,10.47,-0.3,0.06,2.9,1,0,">1 nonsynonymous","F44G S53R S139T",3
"lib1","SARS-CoV-2","TCTCACCAGCAAAACT",6,74.39,9.71,-1.05,0.11,2.21,1.07,0,">1 nonsynonymous","Y91S T140M",2
"lib1","SARS-CoV-2","TCTCACCCAAATGACT",10,166.41,9.81,-0.95,0.07,2.83,1.04,0,"1 nonsynonymous","T170P",1
"lib1","SARS-CoV-2","TCTCACCCAGAATTCA",14,44.42,6,-4.76,2,1.5,1.41,0.05,">1 nonsynonymous","C49R D90I F99Y Q144I V180S",5
"lib1","SARS-CoV-2","TCTCACCCAGACTATC",2,31.49,9.81,-0.95,0.1,1.96,1.03,0.01,">1 nonsynonymous","A14W T55S T201S",3
"lib1","SARS-CoV-2","TCTCACCCCTACCCCT",11,267.99,10.06,-0.71,0.05,2.86,1.02,0,">1 nonsynonymous","I2F I142A",2
"lib1","SARS-CoV-2","TCTCACCGGATAGTTA",3,43.08,10.24,-0.52,0.05,2.92,1.02,0,">1 nonsynonymous","C31Q L122V L188P",3
"lib1","SARS-CoV-2","TCTCACGACCTCCCGG",4,63.88,10.77,0.01,0.08,2.93,1.05,0,">1 nonsynonymous","N64V K199F",2
"lib1","SARS-CoV-2","TCTCACGGGGGCATAG",2,7.45,10.37,-0.39,0.2,2.73,1,0.01,">1 nonsynonymous","N4S A89V",2
"lib1","SARS-CoV-2","TCTCACGTACAGCATA",3,27.72,8.96,-1.8,0.19,1.79,1.14,0.02,">1 nonsynonymous","N64W L95T",2
"lib1","SARS-CoV-2","TCTCACGTATGGTTAA",1,1.95,NA,NA,NA,NA,NA,NA,"stop","W23* V37G S45P Y50V L95C N120K",6
"lib1","SARS-CoV-2","TCTCACTCTAATGAAT",2,20.63,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K56W I104H T148D Q168K K198F",5
"lib1","SARS-CoV-2","TCTCACTGTTAATGTG",11,89.28,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","W23T G101D",2
"lib1","SARS-CoV-2","TCTCAGAAAGCTCTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TCTCAGAATAAACAAG",2,1.35,NA,NA,NA,NA,NA,NA,"stop","I28E K56*",2
"lib1","SARS-CoV-2","TCTCAGAATGGCTCTG",6,22.98,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S43V T55L W106L S113L",4
"lib1","SARS-CoV-2","TCTCAGAGGACAAACT",7,51.11,9.61,-1.16,0.11,1.99,1.1,0,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","TCTCAGCGTCTTTAAG",2,31.87,7.96,-2.8,0.24,1.8,1.11,0.02,">1 nonsynonymous","F126C G155Y T201I",3
"lib1","SARS-CoV-2","TCTCAGGATATAAAGG",4,33.87,6,-4.76,1.15,1.5,1.1,0.02,">1 nonsynonymous","K26T L95K C150T",3
"lib1","SARS-CoV-2","TCTCAGGTACTGTCAA",5,798.13,10.69,-0.07,0.02,2.94,1.03,0,">1 nonsynonymous","L5R V37G",2
"lib1","SARS-CoV-2","TCTCAGGTAGAAACGA",2,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D Y93T",2
"lib1","SARS-CoV-2","TCTCAGGTTACCAAAC",12,0.94,NA,NA,NA,NA,NA,NA,"stop","S36* V115* L122F",3
"lib1","SARS-CoV-2","TCTCAGTAGCATTCAC",1,72.38,10.74,-0.03,0.07,2.93,1.05,0,">1 nonsynonymous","L122R E141M",2
"lib1","SARS-CoV-2","TCTCAGTTCCTGGCTG",5,59.13,9.52,-1.24,0.12,2.09,1.12,0.01,">1 nonsynonymous","D98I G155L",2
"lib1","SARS-CoV-2","TCTCATAACAAGAAAA",6,26.54,10.22,-0.55,0.16,2.25,1,0.01,">1 nonsynonymous","S41E E76N",2
"lib1","SARS-CoV-2","TCTCATAATTCGGCAT",6,0.86,NA,NA,NA,NA,NA,NA,"stop","N30V P82M A89* A105Y L122V C150T",6
"lib1","SARS-CoV-2","TCTCATACCATAACAT",1,14.31,8.54,-2.23,0.08,1.91,1.08,0,">1 nonsynonymous","F12L V20P D59T G83R Q163N",5
"lib1","SARS-CoV-2","TCTCATACTGAAAACT",1,16.31,10.75,-0.01,0.05,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCATAGACTAAACC",7,44.59,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G83V R179M",2
"lib1","SARS-CoV-2","TCTCATAGTGAATACA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","C61* D98R",2
"lib1","SARS-CoV-2","TCTCATATAAAAGACC",2,37.15,10.62,-0.15,0.03,2.95,1,0,"1 nonsynonymous","D90C",1
"lib1","SARS-CoV-2","TCTCATATCGAATACA",9,102.76,10.02,-0.75,0.08,1.98,1.06,0,">1 nonsynonymous","K26L Q84W D98H P197Q S200F",5
"lib1","SARS-CoV-2","TCTCATATTCTGTGCC",2,37.38,10.89,0.12,0.05,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCATCAAATTTTGA",9,119.47,10.83,0.07,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCATCAGATACCTA",4,27.55,6,-4.76,2,1.5,1.4,0.05,">1 nonsynonymous","L38D N58P Y66S G74P A81L",5
"lib1","SARS-CoV-2","TCTCATCATAATCCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A G86Y G101A G146H N151M P191R",6
"lib1","SARS-CoV-2","TCTCATCCTAAAAAGA",4,32.19,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C61N I88L D112A N120F",4
"lib1","SARS-CoV-2","TCTCATCGAATTGCCC",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R G116C V180G",3
"lib1","SARS-CoV-2","TCTCATCGCATTCAAA",9,110.09,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I28T G101R F134G G172A",4
"lib1","SARS-CoV-2","TCTCATCTCACTCTTC",1,65.17,10.83,0.07,0.06,2.96,1,0,"1 nonsynonymous","P54R",1
"lib1","SARS-CoV-2","TCTCATGACCCCACTA",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24Y C49F A190D",3
"lib1","SARS-CoV-2","TCTCATGCAAACCTCA",3,10.13,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C49K S129V K199F",3
"lib1","SARS-CoV-2","TCTCATGCATTAATAA",2,46.79,10.36,-0.4,0.1,2.8,1.05,0,">1 nonsynonymous","N13K N24H S200K",3
"lib1","SARS-CoV-2","TCTCATGGTCCAAGGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S P161S",2
"lib1","SARS-CoV-2","TCTCATTGAAACTGGC",1,15.55,8.29,-2.48,0.34,1.5,1.16,0.05,">1 nonsynonymous","A42E N58M Y165S",3
"lib1","SARS-CoV-2","TCTCATTTGACAAGAA",4,111.98,10.56,-0.2,0.04,2.94,1.02,0,">1 nonsynonymous","L5F E10G N24S",3
"lib1","SARS-CoV-2","TCTCATTTTAGATAAG",1,50.67,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5G A14T A33R T85K F167K K198T",6
"lib1","SARS-CoV-2","TCTCCAAAATAACATA",2,42.7,9.42,-1.34,0.07,2.74,1.11,0,">1 nonsynonymous","Q163N V173P",2
"lib1","SARS-CoV-2","TCTCCAAACTCTTCCC",5,142.49,10.04,-0.73,0.09,2.43,1.02,0,">1 nonsynonymous","G9V L60T G116W",3
"lib1","SARS-CoV-2","TCTCCAAAGAACCTCC",9,67.28,10,-0.77,0.12,1.96,1.07,0.01,">1 nonsynonymous","T46N D97I T100A",3
"lib1","SARS-CoV-2","TCTCCAAAGAAGTTTT",1,25.24,6.59,-4.18,0.41,1.5,1.13,0.02,">1 nonsynonymous","K56L A81D G86D K114A",4
"lib1","SARS-CoV-2","TCTCCAAATACTGAAT",4,13.61,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L5M W23L N64K P169I",4
"lib1","SARS-CoV-2","TCTCCAACCGCACATC",6,155.09,10.36,-0.41,0.05,2.88,1.01,0,">1 nonsynonymous","F62L D97H E141G P191T",4
"lib1","SARS-CoV-2","TCTCCAACTAACCTCC",6,92.99,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6M A18S T63I L122P V181W",5
"lib1","SARS-CoV-2","TCTCCAATCGAATCCT",3,21.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1R G9L I80G P133N Q168S A192V",6
"lib1","SARS-CoV-2","TCTCCAATCGCTATAT",2,8.86,10.54,-0.23,0.1,2.95,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCTCCACAATAATCGA",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L N107Q K132G",3
"lib1","SARS-CoV-2","TCTCCACCTTCGGTTA",3,33.24,10.79,0.02,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCCACGTTTTGTGG",3,6.43,6.36,-4.41,2,1.5,1.19,0.06,">1 nonsynonymous","P54S R78W S139I G146V",4
"lib1","SARS-CoV-2","TCTCCACTTCACGTGA",2,32.82,9.67,-1.09,0.1,2.62,1.07,0,">1 nonsynonymous","Y91F D97N N118A G146A",4
"lib1","SARS-CoV-2","TCTCCAGCACTTGAGT",9,3.97,NA,NA,NA,NA,NA,NA,"stop","K56* T63S",2
"lib1","SARS-CoV-2","TCTCCATACTCTCTTC",1,11.85,10.1,-0.67,0.08,2.83,1.16,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TCTCCATATACGATAC",3,38.25,6.83,-3.93,0.42,1.5,1.05,0.03,">1 nonsynonymous","N120P P161C",2
"lib1","SARS-CoV-2","TCTCCATCCTAGCAAC",3,33.73,10.16,-0.6,0.15,2.56,1.01,0.01,">1 nonsynonymous","S53I Y165F",2
"lib1","SARS-CoV-2","TCTCCATCGAAACAGG",1,39.85,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N1V C31N K48L P161V",4
"lib1","SARS-CoV-2","TCTCCATTAAGCGCCT",1,13.45,10.66,-0.1,0.11,2.87,1.03,0.01,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","TCTCCATTCCCTATCT",12,59.63,9.86,-0.9,0.19,1.85,1.05,0.02,">1 nonsynonymous","D34I T55S T63F S129I",4
"lib1","SARS-CoV-2","TCTCCATTCCTCCCCT",4,16.33,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V65M I72L W106C T148M N151K P161D",6
"lib1","SARS-CoV-2","TCTCCCAAAAAAACAT",1,46.26,6,-4.76,2,1.5,1.27,0.02,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","TCTCCCAAACAGCATT",5,42.61,10.55,-0.21,0.05,2.85,1.09,0,"1 nonsynonymous","A22G",1
"lib1","SARS-CoV-2","TCTCCCAATCGCGACA",1,43.7,9.81,-0.95,0.13,2.32,1.06,0.01,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","TCTCCCAGTGATACCT",8,210.5,9.97,-0.79,0.08,2.3,1.05,0,">1 nonsynonymous","V181M T201Q",2
"lib1","SARS-CoV-2","TCTCCCCAACAACCGT",2,351.99,8.17,-2.59,0.16,1.99,1.08,0.01,">1 nonsynonymous","V37Q K56G G74D",3
"lib1","SARS-CoV-2","TCTCCCCCCAATCGGC",5,66.1,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89I G117P Y165V",3
"lib1","SARS-CoV-2","TCTCCCCGAATCAATG",7,46.8,10.26,-0.5,0.06,2.88,1,0,">1 nonsynonymous","F12L T63V S139T",3
"lib1","SARS-CoV-2","TCTCCCCGCCACGCAT",3,92.83,10.76,-0.01,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCCCGATGAAGGAG",1,14.46,8.77,-1.99,0.07,3,1.05,0,">1 nonsynonymous","T85M L125R",2
"lib1","SARS-CoV-2","TCTCCCTACCAAGACT",2,46.6,7.34,-3.42,0.21,1.5,1.18,0.01,">1 nonsynonymous","C6R C31W L162H",3
"lib1","SARS-CoV-2","TCTCCCTATCAATCCC",3,148.3,10.77,0,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCCCTCTAATACAA",13,343.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","P7H C31G I88G P177W",4
"lib1","SARS-CoV-2","TCTCCCTGATTAATCC",1,37.54,8.93,-1.84,0.09,2.28,1.04,0,">1 nonsynonymous","A14H L162F",2
"lib1","SARS-CoV-2","TCTCCGATACCGTATG",2,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M K94D T100F N107D L183P",5
"lib1","SARS-CoV-2","TCTCCGCACTACCAGA",5,171.27,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","F44T T63S V71H Y175S",4
"lib1","SARS-CoV-2","TCTCCGCCAGTGATCT",3,69.42,10.73,-0.03,0.07,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCCGCCTCAATTTA",5,52.77,8.76,-2.01,0.18,1.83,1.19,0.01,">1 nonsynonymous","S43N P54T L162R",3
"lib1","SARS-CoV-2","TCTCCGCGCTAAAAAA",1,22.73,8.7,-2.06,0.14,2.54,1.19,0.01,">1 nonsynonymous","T55Y D90L Q168C",3
"lib1","SARS-CoV-2","TCTCCGGCAGAAAGAC",2,7.61,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","N24S F62S T85P R127P",4
"lib1","SARS-CoV-2","TCTCCGTTAAACTAAC",4,20.82,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","L5T D59Y I104N G146I",4
"lib1","SARS-CoV-2","TCTCCTAAAAGAACGC",8,100.68,10.12,-0.65,0.06,2.8,1.01,0,">1 nonsynonymous","A14K L57F",2
"lib1","SARS-CoV-2","TCTCCTATATGATTGT",5,150.51,10.51,-0.25,0.04,2.92,1.02,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","TCTCCTATCGATCTGG",1,19.96,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","A89T P96L P169Y Q176R",4
"lib1","SARS-CoV-2","TCTCCTATCTATGCAT",4,0.5,NA,NA,NA,NA,NA,NA,"stop","K87* N157S",2
"lib1","SARS-CoV-2","TCTCCTGGTGATAATC",5,44.76,10.76,-0.01,0.07,2.89,1.09,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","TCTCCTGTCCACGCTA",7,98.38,10.5,-0.26,0.06,2.89,1,0,">1 nonsynonymous","T85H S139L",2
"lib1","SARS-CoV-2","TCTCCTGTCGATGAAT",3,14.71,10,-0.77,0.14,2.32,1,0.01,">1 nonsynonymous","K56G P133S F160L",3
"lib1","SARS-CoV-2","TCTCCTGTCGCCACGC",6,52.47,8.28,-2.48,0.24,1.65,1.11,0.03,">1 nonsynonymous","I88M Y119V",2
"lib1","SARS-CoV-2","TCTCCTTATTGAACAC",8,230.1,10.79,0.03,0.06,2.91,1.06,0,"1 nonsynonymous","L5D",1
"lib1","SARS-CoV-2","TCTCCTTTCCATGGAC",1,7.77,9.66,-1.1,0.2,2.64,1,0.02,">1 nonsynonymous","V11A T201S",2
"lib1","SARS-CoV-2","TCTCGAAAAGCCCCCA",9,6.08,6.1,-4.67,0.87,3,1.14,0,">1 nonsynonymous","E10L S53A C102F Y121A S139A G174W E186L",7
"lib1","SARS-CoV-2","TCTCGAAACAAATAAA",1,25.56,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L5E V77M Y121M R179F",4
"lib1","SARS-CoV-2","TCTCGAAATGGCACAA",1,43.55,8.03,-2.73,0.15,2.25,1.06,0.01,">1 nonsynonymous","Y165L T170Q P191S",3
"lib1","SARS-CoV-2","TCTCGAAATTATAACT",3,104.18,10.69,-0.07,0.05,2.89,1.09,0,">1 nonsynonymous","N130E K199L",2
"lib1","SARS-CoV-2","TCTCGAACTAATCATG",2,15.28,10.28,-0.48,0.05,2.94,1.02,0,">1 nonsynonymous","V37Y L60V G83C",3
"lib1","SARS-CoV-2","TCTCGAAGCCCCCAAA",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M C61Y K114N",3
"lib1","SARS-CoV-2","TCTCGAAGGCCGGTTA",3,63.09,10.17,-0.6,0.07,2.79,1,0,">1 nonsynonymous","T63C N110T G152M",3
"lib1","SARS-CoV-2","TCTCGAAGGGATCAGT",4,42.57,9.78,-0.98,0.18,1.75,1.11,0.01,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TCTCGAATAATCTTGA",3,43.56,10.67,-0.1,0.05,2.98,1,0,">1 nonsynonymous","L5G N58Q H189N",3
"lib1","SARS-CoV-2","TCTCGAATATACTGAT",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y P96M C102F G146L",4
"lib1","SARS-CoV-2","TCTCGAATTACCCACG",3,17.03,8.47,-2.3,0.21,1.52,1.25,0.02,">1 nonsynonymous","C31R K128V G152M",3
"lib1","SARS-CoV-2","TCTCGAATTACGTTAG",8,3751.51,9.2,-1.56,0.08,2.33,1.08,0,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","TCTCGAGAAATACTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85A Y93A Y121*",3
"lib1","SARS-CoV-2","TCTCGAGATCAGGTTA",2,120.94,10.68,-0.08,0.05,2.87,1.05,0,"1 nonsynonymous","S43G",1
"lib1","SARS-CoV-2","TCTCGAGCCAGGCCGC",6,33.64,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68R G101S S139G Q168L",4
"lib1","SARS-CoV-2","TCTCGAGGATATGGAA",5,148.6,10.65,-0.12,0.03,2.96,1,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","TCTCGATAATAAATAG",3,906.53,7.17,-3.59,0.26,1.5,1.18,0.02,">1 nonsynonymous","S41E G86L",2
"lib1","SARS-CoV-2","TCTCGATATAATCACA",1,28.68,9.7,-1.07,0.09,2.9,1.09,0.01,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","TCTCGATCAAATATCT",1,19.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L122V K128S G146P G152Y",4
"lib1","SARS-CoV-2","TCTCGATCGAGACAAC",4,13.97,10.04,-0.72,0.53,1.5,1,0.04,"1 nonsynonymous","D112R",1
"lib1","SARS-CoV-2","TCTCGATTGCATAATC",6,83.39,9.91,-0.85,0.05,2.27,1.07,0,">1 nonsynonymous","Y39N V52N L122G E141N",4
"lib1","SARS-CoV-2","TCTCGCAACGAACAGG",3,41.35,10.77,0,0.08,2.88,1.08,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","TCTCGCAATACAGTCG",5,24.37,6,-4.76,1.34,1.5,1.11,0.01,">1 nonsynonymous","N92T K128L",2
"lib1","SARS-CoV-2","TCTCGCACAACATTGC",1,20.98,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","C49Y Y91S E141D",3
"lib1","SARS-CoV-2","TCTCGCATTGGCCGAT",4,5.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9K V20W G83P T100H C158F N171F R179A",7
"lib1","SARS-CoV-2","TCTCGCCACCACATGG",2,26.15,8.9,-1.87,0.08,2.64,1.11,0,">1 nonsynonymous","V37I D90Y Y119A",3
"lib1","SARS-CoV-2","TCTCGGAGACAATCAT",7,67.63,10.77,0,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCGGATATAGTTAG",3,1.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179L",1
"lib1","SARS-CoV-2","TCTCGGATATCTGACC",11,3.78,NA,NA,NA,NA,NA,NA,"stop","I2S S69L R73S G155H V180*",5
"lib1","SARS-CoV-2","TCTCGGGAAAAGCACT",3,79.89,10.2,-0.56,0.06,2.79,1,0,">1 nonsynonymous","F44K T55R N64E",3
"lib1","SARS-CoV-2","TCTCGGGCCTTCAACG",1,22.82,10.52,-0.25,0.13,2.85,1.06,0.01,"1 nonsynonymous","S164L",1
"lib1","SARS-CoV-2","TCTCGGGTGGTAGATA",5,37.93,6.21,-4.55,0.7,1.5,1.2,0.02,">1 nonsynonymous","P7I N92R C150E",3
"lib1","SARS-CoV-2","TCTCGGTAGCTTCCCA",2,35.62,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I2D I28T N58M R124D I138S",5
"lib1","SARS-CoV-2","TCTCGGTAGTACCCAG",3,53.28,8.13,-2.64,0.16,2,1.11,0.01,">1 nonsynonymous","S36Q N157V",2
"lib1","SARS-CoV-2","TCTCGGTCCGTATCAA",2,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H Y66E N171T",3
"lib1","SARS-CoV-2","TCTCGGTTAAATTAAA",2,16.08,10.11,-0.66,0.12,2.87,1,0.01,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","TCTCGTAACGCACCCC",1,6.87,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","S29P C61P P96H G146L",4
"lib1","SARS-CoV-2","TCTCGTAAGAACCTTT",3,62.8,9.93,-0.83,0.13,1.88,1.06,0.01,"1 nonsynonymous","V77K",1
"lib1","SARS-CoV-2","TCTCGTAAGGGTATCA",7,168.48,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S113V Y119G Y143A",3
"lib1","SARS-CoV-2","TCTCGTACTAAATCCA",4,85.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G K48D P96E",3
"lib1","SARS-CoV-2","TCTCGTCCACAAGGGG",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S W106N Y123E K128V Q168N",5
"lib1","SARS-CoV-2","TCTCGTCTCCTCCAAC",4,132.66,10.74,-0.03,0.06,2.92,1.04,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","TCTCGTCTGTCGAGTT",3,57.33,9.51,-1.25,0.15,1.8,1.08,0.01,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TCTCGTTGCGGTCATG",4,69.6,10.64,-0.13,0.05,2.93,1.04,0,">1 nonsynonymous","C61R D90S",2
"lib1","SARS-CoV-2","TCTCGTTGTACTCACC",3,52.33,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N30V F44T N107S",3
"lib1","SARS-CoV-2","TCTCGTTTTGATACAG",6,23.36,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","V20R L122W S129N G152M",4
"lib1","SARS-CoV-2","TCTCGTTTTTAAACCA",1,20.66,10.27,-0.49,0.06,2.99,1,0,">1 nonsynonymous","T3L S41P Q163S",3
"lib1","SARS-CoV-2","TCTCTAAAACTAATTG",2,25.1,10.06,-0.71,0.14,2.14,1.08,0.01,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","TCTCTAAACAGTTTCA",1,70.98,10.63,-0.13,0.06,2.89,1.07,0,"1 nonsynonymous","N1I",1
"lib1","SARS-CoV-2","TCTCTAAACGATACCC",11,150.1,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5E R25K C150I G196W",4
"lib1","SARS-CoV-2","TCTCTAAACGGCCAGG",5,54.75,9.31,-1.45,0.22,1.5,1.08,0.02,">1 nonsynonymous","K94A V180L",2
"lib1","SARS-CoV-2","TCTCTAACAACTAGCG",2,22.3,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","I88N N118K",2
"lib1","SARS-CoV-2","TCTCTAACCAGTATGA",2,40.88,6.06,-4.7,1.12,1.5,1.26,0.03,">1 nonsynonymous","F62A V180S",2
"lib1","SARS-CoV-2","TCTCTAACGTGGTGTT",12,124.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","E10V G152P F156I R179M",4
"lib1","SARS-CoV-2","TCTCTAAGACCTTAAA",5,20.89,8.95,-1.82,0.13,2.69,1.22,0.01,">1 nonsynonymous","W106F Y119F",2
"lib1","SARS-CoV-2","TCTCTAAGGCATACCA",1,23.69,9.96,-0.81,0.15,2.41,1.11,0.01,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","TCTCTAATACACACAC",3,76.25,10.8,0.03,0.07,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCTAATCGATTTTA",2,16.52,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","A14E P82Y",2
"lib1","SARS-CoV-2","TCTCTAATGAGGAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L125* Y143D Q163S",3
"lib1","SARS-CoV-2","TCTCTAATTTGAAACG",1,5.11,10.33,-0.44,0.26,2.92,1,0,">1 nonsynonymous","A81V T100F V153F",3
"lib1","SARS-CoV-2","TCTCTACAACCAAATC",3,42.08,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","L38C C61L Q168L",3
"lib1","SARS-CoV-2","TCTCTACACTGCGGGA",3,15.82,9.77,-0.99,0.16,2.26,1.02,0.01,">1 nonsynonymous","A33I C61P E135I",3
"lib1","SARS-CoV-2","TCTCTACCTTGAAAAG",8,21.65,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V20M S41K S129R",3
"lib1","SARS-CoV-2","TCTCTACGAGACTAAA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E Y50M",2
"lib1","SARS-CoV-2","TCTCTACTGGTAGAAA",7,303.94,10.79,0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTCTAGAGTAACCCA",9,1.43,NA,NA,NA,NA,NA,NA,"stop","P54G C61R P161I G166D T201*",5
"lib1","SARS-CoV-2","TCTCTAGCGTGTTGAG",1,20.29,10.32,-0.45,0.1,2.64,1.14,0,"1 nonsynonymous","C6F",1
"lib1","SARS-CoV-2","TCTCTAGCTCAACCTA",8,1.04,NA,NA,NA,NA,NA,NA,"stop","T3K Y50H V103S N157C T201*",5
"lib1","SARS-CoV-2","TCTCTATAAAATAACA",6,51.95,8.82,-1.94,0.09,2.69,1.14,0,">1 nonsynonymous","Q163L N171P",2
"lib1","SARS-CoV-2","TCTCTATAAGAAAAGA",2,13.56,10.78,0.02,0.06,2.97,1,0,"1 nonsynonymous","D97S",1
"lib1","SARS-CoV-2","TCTCTATAATTACCTT",5,45.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y D112R S129T",3
"lib1","SARS-CoV-2","TCTCTATATCTAGTTA",2,21.56,7.08,-3.69,0.35,1.5,1.14,0.04,">1 nonsynonymous","A89V N157L",2
"lib1","SARS-CoV-2","TCTCTATCGTCTTGCA",2,64.15,10.64,-0.13,0.08,2.76,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTCTATTTCATAACC",3,10.17,6.5,-4.27,0.93,1.5,1.16,0.07,">1 nonsynonymous","T3L F8R D59L D137T",4
"lib1","SARS-CoV-2","TCTCTCAAAAACTAGC",8,144.48,10.33,-0.43,0.06,2.87,1.05,0,">1 nonsynonymous","S113A T148P",2
"lib1","SARS-CoV-2","TCTCTCAAAAATAAAT",4,31.84,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","E10N D98L P133T Y143V",4
"lib1","SARS-CoV-2","TCTCTCAACAACGAGG",5,68.72,9.73,-1.03,0.09,2.45,1.04,0,">1 nonsynonymous","Y21L S43C K87L L122R",4
"lib1","SARS-CoV-2","TCTCTCAAGTAAAAGT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","Y123* K128E",2
"lib1","SARS-CoV-2","TCTCTCAGTCATTAAC",2,41.91,10.81,0.04,0.07,2.93,1.05,0,">1 nonsynonymous","T55H T148K",2
"lib1","SARS-CoV-2","TCTCTCATAATAAGAT",4,34.57,10.41,-0.35,0.06,2.88,1.02,0,">1 nonsynonymous","I2F N30T",2
"lib1","SARS-CoV-2","TCTCTCATTAAATGAA",1,16.57,6,-4.76,1.68,1.5,1.08,0.02,">1 nonsynonymous","F8V Y21V C61G Y93L A192Q",5
"lib1","SARS-CoV-2","TCTCTCCACAGCCCGC",4,64.6,10.69,-0.08,0.04,2.86,1.09,0,"1 nonsynonymous","S41N",1
"lib1","SARS-CoV-2","TCTCTCCATACCGAAA",2,42.54,6.8,-3.96,0.47,1.5,1.14,0.03,">1 nonsynonymous","L38S R127N T201E",3
"lib1","SARS-CoV-2","TCTCTCCTAAATCGTG",3,17.7,10.3,-0.46,0.08,2.8,1.01,0,">1 nonsynonymous","F44R A190V",2
"lib1","SARS-CoV-2","TCTCTCGATGCCCCTT",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A F99E F134L P197S",4
"lib1","SARS-CoV-2","TCTCTCGCACAGCGCA",1,9.85,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","E10K Y91F Y119S Q176F A190S K198Q",6
"lib1","SARS-CoV-2","TCTCTCTATATTTGTG",5,35.07,10.62,-0.14,0.06,2.93,1,0,">1 nonsynonymous","I2S D90L",2
"lib1","SARS-CoV-2","TCTCTCTCCTTCGAGT",2,28.42,10.84,0.07,0.06,2.86,1.09,0,"1 nonsynonymous","S200V",1
"lib1","SARS-CoV-2","TCTCTCTTAGGTTCAA",1,22.06,10.5,-0.26,0.13,2.93,1.07,0.01,"1 nonsynonymous","N120E",1
"lib1","SARS-CoV-2","TCTCTCTTATGCTGAA",5,34.26,6.29,-4.47,1.04,1.5,1.23,0.06,">1 nonsynonymous","A14N G51S Y91L L95M N120Y E154H S200W",7
"lib1","SARS-CoV-2","TCTCTCTTCCCCACTA",5,66.85,9.71,-1.06,0.17,1.85,1.12,0.01,">1 nonsynonymous","R16I Y35S F62S",3
"lib1","SARS-CoV-2","TCTCTGCATCTACTGT",2,19.11,9.77,-1,0.09,2.96,1,0,">1 nonsynonymous","V37L L60Q T170F",3
"lib1","SARS-CoV-2","TCTCTGCGCCAATTAA",9,111.84,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","N107Y I138C K198V",3
"lib1","SARS-CoV-2","TCTCTGTTAATTGCAT",8,84.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L G51S P96C",3
"lib1","SARS-CoV-2","TCTCTGTTGCAATCAA",2,72.9,9.3,-1.47,0.09,2.64,1.05,0,">1 nonsynonymous","G9K V37Q T85P T170K",4
"lib1","SARS-CoV-2","TCTCTTAACTTTGCTG",5,114.17,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","TCTCTTACAGTTAACG",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L A33D A145C",3
"lib1","SARS-CoV-2","TCTCTTATAAGACAAA",3,58.03,6.32,-4.44,0.51,1.5,1.15,0.02,">1 nonsynonymous","N92L Q176G",2
"lib1","SARS-CoV-2","TCTCTTATGCATAAGT",2,64.82,10.76,0,0.06,2.84,1.05,0,"1 nonsynonymous","F62V",1
"lib1","SARS-CoV-2","TCTCTTCAATTATTTT",5,2.73,NA,NA,NA,NA,NA,NA,"stop","N4C Y178*",2
"lib1","SARS-CoV-2","TCTCTTCAGTCCAATG",9,75.82,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","E10F A81P",2
"lib1","SARS-CoV-2","TCTCTTCCATGAAATA",13,88.01,8.83,-1.93,0.16,1.8,1.14,0.01,">1 nonsynonymous","F12D G174D",2
"lib1","SARS-CoV-2","TCTCTTCTGCCTTGGG",7,120.01,10.69,-0.08,0.04,2.91,1.02,0,"1 nonsynonymous","C61E",1
"lib1","SARS-CoV-2","TCTCTTGCACATAGAT",3,19.34,8.43,-2.34,0.32,2.16,1.01,0.03,">1 nonsynonymous","A81T G117R",2
"lib1","SARS-CoV-2","TCTCTTGTTTATACTA",2,9.49,6,-4.76,2,3,1.1,0,">1 nonsynonymous","E10T Y35D P54N K94M I142R",5
"lib1","SARS-CoV-2","TCTCTTTACAACAGTT",3,78.87,10.79,0.03,0.08,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TCTCTTTCCACAACCA",2,19.97,10.19,-0.58,0.18,2.56,1,0.02,">1 nonsynonymous","A105Y L187C",2
"lib1","SARS-CoV-2","TCTCTTTTATAACGGA",2,25.1,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","S45R L131A L162D V182E",4
"lib1","SARS-CoV-2","TCTCTTTTCCCTGAAA",6,107.7,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","E10T L38T F44A D68E I88W T100M",6
"lib1","SARS-CoV-2","TCTGAAAAAGTTGAAC",1,37.97,6.39,-4.38,0.98,1.5,1.17,0.08,">1 nonsynonymous","L122H K128I",2
"lib1","SARS-CoV-2","TCTGAAAACAGACTAG",4,32.46,9.9,-0.87,0.11,2.07,1.06,0,">1 nonsynonymous","K26T P82T N120Q",3
"lib1","SARS-CoV-2","TCTGAAAACATTAAGT",3,30.97,10.74,-0.02,0.05,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGAAAAGTCCTACA",3,19.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2H L38H P82L",3
"lib1","SARS-CoV-2","TCTGAAAATATTATCA",1,32.89,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","P54L S129D A145W N157I V173S",5
"lib1","SARS-CoV-2","TCTGAAATGGGTTAGT",2,10.91,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","A81T N118V R124P",3
"lib1","SARS-CoV-2","TCTGAAATTCGTAGAA",4,104,10.75,-0.02,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGAACACCCCATCT",3,26.07,10.27,-0.49,0.07,2.88,1.04,0,">1 nonsynonymous","K87S T148I",2
"lib1","SARS-CoV-2","TCTGAACATCTCAACA",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36G F47K G83S",3
"lib1","SARS-CoV-2","TCTGAACTAAGCAAGC",10,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K K94N Q163L",3
"lib1","SARS-CoV-2","TCTGAACTAGTCTCTC",2,0,NA,NA,NA,NA,NA,NA,"stop","A14S A42L D59* G74V Q84L S129L N151L N171K",8
"lib1","SARS-CoV-2","TCTGAACTTAGATTAT",12,95.54,9.28,-1.49,0.29,1.5,1,0.04,"1 nonsynonymous","V181Y",1
"lib1","SARS-CoV-2","TCTGAAGATTCGGAGC",4,15.96,6,-4.76,2,3,1.13,0,">1 nonsynonymous","P7N T63I V77E V103G Y119R",5
"lib1","SARS-CoV-2","TCTGAAGCGTGTGAAT",9,85.87,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86R K94Q F156L",3
"lib1","SARS-CoV-2","TCTGAAGGACCCACAT",4,51.86,10.09,-0.68,0.09,2.68,1.04,0,">1 nonsynonymous","T63V K87N P133S",3
"lib1","SARS-CoV-2","TCTGAAGGCGTAATCA",3,82.47,10.51,-0.25,0.05,2.96,1.03,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","TCTGAAGTAGAAATTC",5,48.55,6.87,-3.89,0.37,1.5,1.09,0.03,">1 nonsynonymous","I88Y L95H",2
"lib1","SARS-CoV-2","TCTGAAGTTGCTGATA",1,26.41,10.72,-0.04,0.03,2.98,1,0,">1 nonsynonymous","Q84M K128L",2
"lib1","SARS-CoV-2","TCTGAAGTTGTTTTGT",5,0,NA,NA,NA,NA,NA,NA,"stop","N30W N120R L131* V173W",4
"lib1","SARS-CoV-2","TCTGAATAAATACTTG",7,114.89,10.73,-0.04,0.06,2.79,1.08,0,">1 nonsynonymous","T100C K198E",2
"lib1","SARS-CoV-2","TCTGAATAACAAGTCA",4,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105R L131E L162G",3
"lib1","SARS-CoV-2","TCTGAATAGAAAGAGT",1,11.74,8.76,-2.01,0.31,1.5,1,0.04,">1 nonsynonymous","F44R L57I E135A T140S",4
"lib1","SARS-CoV-2","TCTGAATAGCTAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","G51C Y91* S200A",3
"lib1","SARS-CoV-2","TCTGAATATCATTCAA",1,2.05,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib1","SARS-CoV-2","TCTGAATATCTAAGTA",11,112.78,10.66,-0.1,0.06,2.93,1.03,0,">1 nonsynonymous","L60H D97V",2
"lib1","SARS-CoV-2","TCTGAATCCAAAAATA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","V71* G152R",2
"lib1","SARS-CoV-2","TCTGAATGATGAGACG",4,42.95,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","K48M Y91N Y121D P149R",4
"lib1","SARS-CoV-2","TCTGAATGCTATATAA",1,18.16,10.73,-0.03,0.11,2.96,1,0,">1 nonsynonymous","G9R D98N",2
"lib1","SARS-CoV-2","TCTGACAATACATAAT",6,174.26,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","K56P T63F V71R I88L S129P",5
"lib1","SARS-CoV-2","TCTGACACAATAACAG",1,30.42,8.65,-2.11,0.09,2.53,1.07,0,">1 nonsynonymous","G83S I142S F160A",3
"lib1","SARS-CoV-2","TCTGACACGTAGATTT",5,52.15,6,-4.76,1.28,1.5,1.2,0.01,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","TCTGACAGCGCATCAC",1,48.14,10.81,0.04,0.06,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGACATAAAGAGTT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118L V180R",2
"lib1","SARS-CoV-2","TCTGACATCAAGATGG",2,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F D112R",2
"lib1","SARS-CoV-2","TCTGACATTTGTCCGA",2,17.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C31N V52T D112L",3
"lib1","SARS-CoV-2","TCTGACCACAGAGAAA",3,38.26,8.86,-1.91,0.3,1.5,1,0.04,">1 nonsynonymous","W23Y V37T A89I",3
"lib1","SARS-CoV-2","TCTGACCAGCGAGATC",2,36.93,8.57,-2.19,0.12,2.85,1.06,0.01,">1 nonsynonymous","Y123K Y159A",2
"lib1","SARS-CoV-2","TCTGACCCCATACGGT",5,34.1,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L57Q F99S",2
"lib1","SARS-CoV-2","TCTGACCTTATCTGAG",1,125.18,9.26,-1.5,0.08,2.81,1.14,0,"1 nonsynonymous","N157G",1
"lib1","SARS-CoV-2","TCTGACGAAGATAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","K87N N130*",2
"lib1","SARS-CoV-2","TCTGACGATATACCTT",4,0.56,NA,NA,NA,NA,NA,NA,"stop","K87T D97R K128* F160V V180*",5
"lib1","SARS-CoV-2","TCTGACGCAGGACACA",5,94.24,9.8,-0.96,0.09,2.08,1.03,0,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","TCTGACTAAAAAGACT",6,137.01,10.74,-0.03,0.04,2.9,1.05,0,">1 nonsynonymous","N120Q H189F T201R",3
"lib1","SARS-CoV-2","TCTGACTAGCGCAACA",3,51.9,6,-4.76,1.43,1.5,1.1,0.01,">1 nonsynonymous","R16S S29A L60V G172R",4
"lib1","SARS-CoV-2","TCTGACTATCTAGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87G V115* Q163D",3
"lib1","SARS-CoV-2","TCTGACTCAAGTGTAA",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R S41I G83L K94V",4
"lib1","SARS-CoV-2","TCTGACTCTCCAATCG",2,15.53,9.15,-1.62,0.22,1.63,1.23,0.02,">1 nonsynonymous","A105Y N120Y K128M T201G",4
"lib1","SARS-CoV-2","TCTGACTGGACGTGGT",4,70.8,9.24,-1.52,0.16,1.5,1.26,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","TCTGAGAACAAGGAAA",6,50.22,6.87,-3.89,0.31,1.5,1.13,0.02,">1 nonsynonymous","A89L C102P G166S",3
"lib1","SARS-CoV-2","TCTGAGAACAGTCCAC",3,50.94,6.75,-4.01,0.36,1.53,1.19,0.03,">1 nonsynonymous","V11T G86A T148D",3
"lib1","SARS-CoV-2","TCTGAGAACGAAACAT",5,99.48,6.06,-4.7,0.68,1.5,1.2,0.01,">1 nonsynonymous","S41P G117T F126S I142L",4
"lib1","SARS-CoV-2","TCTGAGAGAACTCCAA",5,112.87,6.95,-3.82,0.3,1.5,1.13,0.02,">1 nonsynonymous","L38H K87E N110V Q163T",4
"lib1","SARS-CoV-2","TCTGAGATGACGGATC",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L A89V",2
"lib1","SARS-CoV-2","TCTGAGATGGCACACG",1,4.21,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib1","SARS-CoV-2","TCTGAGATTCTATACT",7,51.53,6.74,-4.03,0.29,1.5,1.13,0.01,">1 nonsynonymous","T3K R124S",2
"lib1","SARS-CoV-2","TCTGAGGAAAAGGTGC",8,74.96,6.12,-4.65,0.77,1.5,1.21,0.02,">1 nonsynonymous","N1V G9P V71E S139T",4
"lib1","SARS-CoV-2","TCTGAGGAATACCTAA",4,35.79,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","L95M R136F T148G F160I",4
"lib1","SARS-CoV-2","TCTGAGGTACTTCGGC",9,95.38,10.22,-0.55,0.06,2.84,1,0,"1 nonsynonymous","D90G",1
"lib1","SARS-CoV-2","TCTGAGTACACTGTTA",2,31.16,10.56,-0.2,0.07,2.81,1.08,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TCTGAGTGGCCCACAA",1,20.77,8.53,-2.24,0.27,2.15,1.07,0.03,">1 nonsynonymous","D90N D98L N120P S164T",4
"lib1","SARS-CoV-2","TCTGAGTGTATCAAAA",2,163.54,9.32,-1.44,0.08,2.71,1.08,0,"1 nonsynonymous","Q176S",1
"lib1","SARS-CoV-2","TCTGAGTTCATATTCT",5,0.94,NA,NA,NA,NA,NA,NA,"stop","N107S E154G G174M K198*",4
"lib1","SARS-CoV-2","TCTGATAACCAAATTC",2,100.19,10.36,-0.4,0.07,2.93,1.04,0,">1 nonsynonymous","I2R G9N L60P",3
"lib1","SARS-CoV-2","TCTGATAAGGCTTAAA",3,7.16,9.02,-1.74,0.44,1.95,1.15,0.06,">1 nonsynonymous","T15Y R27L G86H I104N",4
"lib1","SARS-CoV-2","TCTGATAAGTTTCAAG",1,64.11,8.58,-2.18,0.09,2.5,1.16,0,">1 nonsynonymous","I2N T15A I142S P149E",4
"lib1","SARS-CoV-2","TCTGATAATGGTAACC",3,55.28,10.78,0.02,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGATAATTTAAAAA",4,107.09,10.4,-0.37,0.04,2.86,1.04,0,">1 nonsynonymous","D75M K128M E141N",3
"lib1","SARS-CoV-2","TCTGATACGCTTGAAA",6,5.02,NA,NA,NA,NA,NA,NA,"stop","A14S V71M L95*",3
"lib1","SARS-CoV-2","TCTGATATAGCGTTAA",2,6.12,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10M F99D L183S",3
"lib1","SARS-CoV-2","TCTGATATGCGAGAAA",4,51.46,10.86,0.09,0.04,2.96,1,0,">1 nonsynonymous","N1S A42K",2
"lib1","SARS-CoV-2","TCTGATATGGGACTTA",2,17.61,9.29,-1.48,0.1,2.8,1.06,0.01,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TCTGATATTATAACCA",1,54.97,10.26,-0.51,0.08,2.78,1.05,0,">1 nonsynonymous","N4S R16L D75N E141K",4
"lib1","SARS-CoV-2","TCTGATCATTTTGTAG",4,23.01,8.86,-1.9,0.2,1.5,1.12,0.02,">1 nonsynonymous","R27P Y35R V115G",3
"lib1","SARS-CoV-2","TCTGATCCGACATTAA",3,32.32,10.64,-0.13,0.05,2.96,1,0,">1 nonsynonymous","F62Y P149R V153D",3
"lib1","SARS-CoV-2","TCTGATCCGATCCGCA",9,122.53,10.27,-0.5,0.06,2.83,1.05,0,">1 nonsynonymous","C6N S164T",2
"lib1","SARS-CoV-2","TCTGATCTGTGAACAT",8,213.75,10.72,-0.05,0.05,2.91,1.06,0,"1 nonsynonymous","K198W",1
"lib1","SARS-CoV-2","TCTGATGAATGGAACT",1,228.93,8.58,-2.18,0.1,2.55,1.08,0,"1 nonsynonymous","Q176T",1
"lib1","SARS-CoV-2","TCTGATGCAGTCATAT",2,71.82,9.01,-1.75,0.07,2.78,1.12,0,">1 nonsynonymous","V52I E141S G166M",3
"lib1","SARS-CoV-2","TCTGATGGATACATAA",10,4.14,NA,NA,NA,NA,NA,NA,"stop","P96* K114M N157K",3
"lib1","SARS-CoV-2","TCTGATGGGCCGCACG",2,41.53,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","V20S R136D P149H",3
"lib1","SARS-CoV-2","TCTGATTAACTATATA",7,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R N64W D98I P169T",4
"lib1","SARS-CoV-2","TCTGATTCAACCAATG",6,71.3,8.27,-2.49,0.31,1.5,1.05,0.04,">1 nonsynonymous","S45L T55K V77F T148I",4
"lib1","SARS-CoV-2","TCTGATTCTGTGATGT",2,0.25,NA,NA,NA,NA,NA,NA,"stop","A14* K87H L122N F167L",4
"lib1","SARS-CoV-2","TCTGATTGCCAATAGA",3,30.79,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I2T S43F K87N A105R",4
"lib1","SARS-CoV-2","TCTGATTTGCAGCATC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12Y K94* K114N P149*",4
"lib1","SARS-CoV-2","TCTGCAAAACCAAATC",4,73.21,10.17,-0.6,0.09,2.64,1.03,0,">1 nonsynonymous","F8V T63L",2
"lib1","SARS-CoV-2","TCTGCAAAACGCTATT",6,173.3,10.77,0,0.05,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGCAAAGCGTATGC",1,55.8,10.43,-0.34,0.09,2.73,1.07,0,"1 nonsynonymous","K132W",1
"lib1","SARS-CoV-2","TCTGCAAATACAGCAG",2,42.47,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I28L G86R Y143F F167P",4
"lib1","SARS-CoV-2","TCTGCAACAGAAAATC",8,17.76,6.16,-4.6,0.28,1.5,1.06,0,">1 nonsynonymous","D34F R179C",2
"lib1","SARS-CoV-2","TCTGCAACATCAGGCT",2,37.92,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","F17W L57F L95P",3
"lib1","SARS-CoV-2","TCTGCAACTGCTTGCA",2,12.13,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42F P96F D98N Y123S N130L Y175S",6
"lib1","SARS-CoV-2","TCTGCAATATGATAAT",2,15.28,10.77,0,0.08,2.97,1.03,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TCTGCAATCAATATTA",6,34.69,8.81,-1.96,0.18,1.5,1.24,0.01,">1 nonsynonymous","T55M F70Y S139N",3
"lib1","SARS-CoV-2","TCTGCACCATTCTTAT",2,27.89,10.27,-0.5,0.07,2.8,1.01,0,">1 nonsynonymous","F8M Q144H",2
"lib1","SARS-CoV-2","TCTGCACCCCTGCCAC",8,45.16,10.87,0.1,0.11,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGCACGCGCACCTT",2,30.73,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8M V20M D34L N109G I138R",5
"lib1","SARS-CoV-2","TCTGCACTATTACGGT",1,28.09,10.61,-0.16,0.07,2.94,1.03,0,">1 nonsynonymous","L38F D90T L122R",3
"lib1","SARS-CoV-2","TCTGCAGACTCTCCCA",2,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K Y50M C61S D90R C102P",5
"lib1","SARS-CoV-2","TCTGCAGAGGAGAATG",2,25.97,10.53,-0.23,0.07,2.88,1,0,"1 nonsynonymous","P96N",1
"lib1","SARS-CoV-2","TCTGCAGATGCACCCC",6,84.49,6.88,-3.89,0.35,1.5,1.21,0.02,">1 nonsynonymous","N24T L38H L57M Y121F S129I P191T",6
"lib1","SARS-CoV-2","TCTGCAGATGGCTTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84* I88S T100* D112I",4
"lib1","SARS-CoV-2","TCTGCATACAATTGGA",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Y V37R G172L",3
"lib1","SARS-CoV-2","TCTGCATACGACACAT",3,20.77,10.7,-0.06,0.1,2.91,1.06,0.01,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","TCTGCATCTCCACTTA",11,189.52,10.79,0.02,0.07,2.93,1.04,0,"1 nonsynonymous","N120A",1
"lib1","SARS-CoV-2","TCTGCATGTTATTACT",6,46.25,9.1,-1.67,0.19,1.64,1.22,0.01,">1 nonsynonymous","R136F F160G",2
"lib1","SARS-CoV-2","TCTGCCACACTTCCGC",3,52.82,10.7,-0.06,0.06,2.97,1,0,"1 nonsynonymous","N58V",1
"lib1","SARS-CoV-2","TCTGCCAGGCAACCCT",4,122.33,10.8,0.03,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGCCAGGGCAACTA",6,17.39,6,-4.76,2,3,1.08,0,">1 nonsynonymous","C49G Y93F",2
"lib1","SARS-CoV-2","TCTGCCATTTAGAACA",4,0,NA,NA,NA,NA,NA,NA,"stop","F8L Q84* Q168N",3
"lib1","SARS-CoV-2","TCTGCCCCAGAGTAAA",3,27.43,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P82V D90I S139H",3
"lib1","SARS-CoV-2","TCTGCCGATACTCATC",3,15.58,10.79,0.03,0.05,2.8,1.12,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","TCTGCCGCACCGTTAT",4,12.95,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y50L V65T W106E E141R Y165A",5
"lib1","SARS-CoV-2","TCTGCCTAGTAAAACA",2,9.94,8.05,-2.71,0.18,2.01,1.2,0.01,">1 nonsynonymous","L57K P169C",2
"lib1","SARS-CoV-2","TCTGCCTGCAGTGAAT",1,26.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38P Y50T",2
"lib1","SARS-CoV-2","TCTGCCTTTTCGAGCA",2,19.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3H K87G W106L G155S",4
"lib1","SARS-CoV-2","TCTGCGATATAACTCA",2,18.09,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","L5M N107H C150I",3
"lib1","SARS-CoV-2","TCTGCGCTACTATGTA",7,98.01,9.93,-0.84,0.07,2.56,1.06,0,">1 nonsynonymous","T3I Y35E",2
"lib1","SARS-CoV-2","TCTGCGCTCATCTGTG",7,126.55,8.81,-1.96,0.09,2.81,1.1,0,">1 nonsynonymous","F126K S184L",2
"lib1","SARS-CoV-2","TCTGCGGACACTTTAA",5,3.16,NA,NA,NA,NA,NA,NA,"stop","A81L D90* L111R K128S P149Y",5
"lib1","SARS-CoV-2","TCTGCGGAGCGCTGAA",2,2.67,NA,NA,NA,NA,NA,NA,"stop","G51W L60D A105* S147P Y178N",5
"lib1","SARS-CoV-2","TCTGCGTATACGAGCA",6,111,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K87S D98S P149K Q168L Q176I",5
"lib1","SARS-CoV-2","TCTGCTAAAAACCAAA",2,12.7,6,-4.76,2,1.5,1.11,0.07,">1 nonsynonymous","N1L S45L A81T N107M R127S N157R Q168W P197K",8
"lib1","SARS-CoV-2","TCTGCTACAAATTTAT",1,12.78,6.32,-4.45,0.83,1.5,1.13,0.04,">1 nonsynonymous","S69L A81S Y119N",3
"lib1","SARS-CoV-2","TCTGCTACCAAGATCT",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8H S43F G101V N157R V180P",5
"lib1","SARS-CoV-2","TCTGCTACTCAATCAT",9,101.99,6.04,-4.73,0.64,1.5,1.17,0.01,">1 nonsynonymous","F44A N107V P169H",3
"lib1","SARS-CoV-2","TCTGCTCGAATCGTCG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* A14G L122M K128V V173S S200Y",6
"lib1","SARS-CoV-2","TCTGCTGAACGCCTGG",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Q P82R D97K G172M",4
"lib1","SARS-CoV-2","TCTGCTGACCATCACC",3,9.74,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4S D90F D98T N107W F160V",5
"lib1","SARS-CoV-2","TCTGGAACCGTAGGTG",6,0.29,NA,NA,NA,NA,NA,NA,"stop","I104S Y119* G152R K198T",4
"lib1","SARS-CoV-2","TCTGGAACTGGAATCC",13,61.93,6.02,-4.74,0.9,1.5,1.15,0.02,">1 nonsynonymous","A67S I138H G152I",3
"lib1","SARS-CoV-2","TCTGGAATAATACATC",5,83.64,10.78,0.01,0.06,2.9,1.06,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","TCTGGAATACGCCGAA",8,151.54,10.72,-0.05,0.05,2.91,1.06,0,">1 nonsynonymous","T63L T85R",2
"lib1","SARS-CoV-2","TCTGGAATGCTATCTA",6,35.3,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V77Y N107K Y119L I138R",4
"lib1","SARS-CoV-2","TCTGGAATGTGCGCAT",2,15.88,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Q176H V181P",2
"lib1","SARS-CoV-2","TCTGGAGTGCAACCTT",1,20.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59G Y91S Y121I Q144E Y178A",5
"lib1","SARS-CoV-2","TCTGGATACAGTCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F17E D90* N130*",3
"lib1","SARS-CoV-2","TCTGGATTCCACCTAA",8,79.56,9.79,-0.98,0.06,2.83,1.04,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","TCTGGCAGACATCTTA",4,82.16,10.34,-0.43,0.04,2.88,1.07,0,">1 nonsynonymous","T3A A105Y L122S",3
"lib1","SARS-CoV-2","TCTGGCAGCTCCCGCT",2,0.43,NA,NA,NA,NA,NA,NA,"stop","E10* Q176L P197S",3
"lib1","SARS-CoV-2","TCTGGCATAATTAATC",6,84.93,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S113A N120Y G172V K199L",4
"lib1","SARS-CoV-2","TCTGGCATGAGAACTA",1,24,10.23,-0.54,0.08,2.91,1.09,0,">1 nonsynonymous","L60H G174L T201V",3
"lib1","SARS-CoV-2","TCTGGCCACAAACATA",6,0.67,NA,NA,NA,NA,NA,NA,"stop","C6P R25* D90G D137Q",4
"lib1","SARS-CoV-2","TCTGGCCCTGAATCTT",2,48.67,10.67,-0.1,0.07,2.77,1.14,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","TCTGGCCGGACGAACA",2,0.5,NA,NA,NA,NA,NA,NA,"stop","T3V T170* T201L",3
"lib1","SARS-CoV-2","TCTGGCCTCAAGAATG",4,17.03,10.7,-0.06,0.12,2.81,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGGCGTCATACTGA",2,36.72,10.64,-0.12,0.05,2.92,1.02,0,">1 nonsynonymous","N64S D90L",2
"lib1","SARS-CoV-2","TCTGGCTAAGTTCAGT",12,48.55,6,-4.76,2,3,1.19,0,">1 nonsynonymous","P82L I104F G146S G172F",4
"lib1","SARS-CoV-2","TCTGGGAAGTCATAAA",5,37.02,6.16,-4.6,0.69,1.5,1.18,0.02,">1 nonsynonymous","N92G G117P V173Q",3
"lib1","SARS-CoV-2","TCTGGGCGAGAATACC",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K C61S A67I I88F",4
"lib1","SARS-CoV-2","TCTGGGGACAAACTGA",5,20.6,6.81,-3.95,0.35,1.5,1.25,0.03,">1 nonsynonymous","D34C Y93R N107Q N118L V173F",5
"lib1","SARS-CoV-2","TCTGGGTATTTAAATA",10,57.62,10.5,-0.27,0.06,2.91,1.03,0,">1 nonsynonymous","P96G T201M",2
"lib1","SARS-CoV-2","TCTGGGTGACGCCGAT",1,10.78,10.67,-0.1,0.11,2.87,1.15,0,">1 nonsynonymous","T63N T201M",2
"lib1","SARS-CoV-2","TCTGGTAGAGGCCACA",6,61.37,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Q84L S113Q Y143S",3
"lib1","SARS-CoV-2","TCTGGTATAAAGCGCT",2,30.39,6.52,-4.24,0.36,1.55,1.17,0.01,">1 nonsynonymous","R127V N157I",2
"lib1","SARS-CoV-2","TCTGGTTAAGTTTAGC",2,2.29,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib1","SARS-CoV-2","TCTGGTTGACAAAGCA",2,16.02,6,-4.76,2,1.5,1.04,0.04,">1 nonsynonymous","C49V A145W",2
"lib1","SARS-CoV-2","TCTGTAAAAACTGAGC",12,274.58,10.14,-0.63,0.06,2.62,1.03,0,">1 nonsynonymous","I2A P133W",2
"lib1","SARS-CoV-2","TCTGTAAAAAGATTCC",17,64.65,6.6,-4.16,0.37,1.5,1.24,0.02,">1 nonsynonymous","C49S Q163N",2
"lib1","SARS-CoV-2","TCTGTAAAACTGGTTA",6,47.31,9.86,-0.91,0.12,2.27,1.07,0.01,">1 nonsynonymous","N4V G51S S147I",3
"lib1","SARS-CoV-2","TCTGTAAACGCACTTA",1,20.92,10.71,-0.05,0.05,2.91,1.03,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","TCTGTAAATACGTTAC",6,116.06,9.54,-1.23,0.12,2.04,1.15,0,">1 nonsynonymous","N92S I138N",2
"lib1","SARS-CoV-2","TCTGTAACCAACAAAC",4,40.13,9.68,-1.09,0.11,2.31,1.04,0.01,">1 nonsynonymous","D34G K87C",2
"lib1","SARS-CoV-2","TCTGTAACGCTTCCCA",5,14.43,6,-4.76,1.02,3,1.17,0.01,">1 nonsynonymous","V71K C102D",2
"lib1","SARS-CoV-2","TCTGTAATGCCAGCAG",4,137.28,10.83,0.06,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTGTACAACTAAATG",6,56.49,9.56,-1.2,0.1,1.9,1.06,0,">1 nonsynonymous","A14F G116S V173M",3
"lib1","SARS-CoV-2","TCTGTACACCGTAAAG",6,55.21,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G86I N120M",2
"lib1","SARS-CoV-2","TCTGTACCCGGGAATT",13,60.62,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F17R N40L L57Y F99P L122R",5
"lib1","SARS-CoV-2","TCTGTACGACCCAACT",6,38.46,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y50V I88T Q144I F156P",4
"lib1","SARS-CoV-2","TCTGTATAAATCCTAG",4,54.91,10.83,0.07,0.07,2.94,1.01,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","TCTGTATAACCGACAT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","C31A V37* D97L F156Q Q163S P197T",6
"lib1","SARS-CoV-2","TCTGTATATAGCGTTC",1,13.11,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","N58T F99T F160M",3
"lib1","SARS-CoV-2","TCTGTATATCTCATAA",12,43.53,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","D34I V77K K87G Y165H",4
"lib1","SARS-CoV-2","TCTGTATCCAGTTTAG",6,71.13,9.14,-1.62,0.27,1.5,1,0.04,"1 nonsynonymous","P82H",1
"lib1","SARS-CoV-2","TCTGTATTGAATATTA",5,104.99,10.48,-0.29,0.05,2.94,1.03,0,"1 nonsynonymous","N151P",1
"lib1","SARS-CoV-2","TCTGTATTTTGCAATC",1,1.49,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib1","SARS-CoV-2","TCTGTCAACTATATGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W R16T L38M V65L Q176A",5
"lib1","SARS-CoV-2","TCTGTCATGGATAAAT",3,0.04,NA,NA,NA,NA,NA,NA,"stop","R73* I104G Y175I",3
"lib1","SARS-CoV-2","TCTGTCCATCCGACAA",3,20.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56D I88N S147H Q168H",4
"lib1","SARS-CoV-2","TCTGTCCCAGTAATCC",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G I80K I104L I142W",4
"lib1","SARS-CoV-2","TCTGTCCGATAGACGA",16,407.78,9.64,-1.12,0.03,2.92,1.05,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","TCTGTCCTTTACACAG",1,5.72,6,-4.76,2,1.5,1.03,0.01,">1 nonsynonymous","V103Q N110S",2
"lib1","SARS-CoV-2","TCTGTCGAAATCCAAA",7,88.08,8.99,-1.78,0.25,1.5,1,0.03,">1 nonsynonymous","S36I Y91N D98S S129L",4
"lib1","SARS-CoV-2","TCTGTCGCTGACAACC",6,70.73,10.64,-0.12,0.07,2.85,1.05,0,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","TCTGTCTATACATGCG",3,11.13,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","G83N L95N",2
"lib1","SARS-CoV-2","TCTGTCTCTACCTGAA",4,31.95,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","A89P D97T N107L",3
"lib1","SARS-CoV-2","TCTGTCTGTACGAACT",6,56.7,9.68,-1.08,0.09,2.63,1.06,0,">1 nonsynonymous","L60A G155Y",2
"lib1","SARS-CoV-2","TCTGTCTTTCATATAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N92*",1
"lib1","SARS-CoV-2","TCTGTGACGGCCGCAA",1,3.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","TCTGTGAGTGCGACAA",6,23.97,8.58,-2.19,0.3,1.5,1,0.03,">1 nonsynonymous","T3V R127T",2
"lib1","SARS-CoV-2","TCTGTGTCAACCATAT",2,24.48,6,-4.76,1.55,1.5,1.18,0.02,"1 nonsynonymous","G83P",1
"lib1","SARS-CoV-2","TCTGTTAAATTGAAAA",4,59.79,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V11G W106E Y119G L131Q Q176S",5
"lib1","SARS-CoV-2","TCTGTTAACCAAAACT",4,40.67,10.08,-0.68,0.13,2.35,1.01,0.01,">1 nonsynonymous","D98H F134D G196W",3
"lib1","SARS-CoV-2","TCTGTTAATTAAATGA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","T3Y S36I T46I G51* S129G Y175H",6
"lib1","SARS-CoV-2","TCTGTTACATATAAAT",8,121.24,8.83,-1.93,0.15,1.88,1.13,0.01,">1 nonsynonymous","C6M T100I S129M F160G",4
"lib1","SARS-CoV-2","TCTGTTAGACCGTGTC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","TCTGTTCTGAGACTGG",5,5.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13L A42H I104H G174Q",4
"lib1","SARS-CoV-2","TCTGTTGGATCACCAT",2,27.58,9.7,-1.06,0.11,2.63,1.01,0,">1 nonsynonymous","V11F Y39P",2
"lib1","SARS-CoV-2","TCTGTTGTAAACTGCT",2,7.12,6,-4.76,2,3,1.09,0.01,">1 nonsynonymous","A105L R127I P169E",3
"lib1","SARS-CoV-2","TCTGTTGTACTAAAAC",4,20.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51K V77P Y121K D137W",4
"lib1","SARS-CoV-2","TCTGTTGTCTCCCACC",2,6.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28Q G86L T140A",3
"lib1","SARS-CoV-2","TCTGTTGTTGTTCTAC",2,57.04,10.18,-0.58,0.05,2.74,1.02,0,">1 nonsynonymous","A81V S129N F160S",3
"lib1","SARS-CoV-2","TCTGTTTAACTAGAGA",1,24.52,9.4,-1.37,0.21,2.37,1.13,0.02,"1 nonsynonymous","V20L",1
"lib1","SARS-CoV-2","TCTGTTTACAACTTTG",2,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N G51S D59A D97W C102R Y159L",6
"lib1","SARS-CoV-2","TCTGTTTACGCAAATA",5,39.25,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","TCTGTTTCCCACGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39E L57M A105I Y119*",4
"lib1","SARS-CoV-2","TCTTAAAAAAACACTG",10,86.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16L Y21E L57T G155A",4
"lib1","SARS-CoV-2","TCTTAAAAATACTGAA",3,22.19,6.15,-4.61,0.82,1.5,1.12,0.03,">1 nonsynonymous","I88D S129Q A145V P161E P197R T201R",6
"lib1","SARS-CoV-2","TCTTAAAAATTTAATC",1,10.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y93I Y123S E186D T201S",4
"lib1","SARS-CoV-2","TCTTAAAAGATATATG",8,81.23,10.84,0.08,0.07,2.96,1.02,0,"1 nonsynonymous","T201Q",1
"lib1","SARS-CoV-2","TCTTAAAATGATCGTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib1","SARS-CoV-2","TCTTAAACAAAAAATA",4,27.18,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F8Y S36I D68W F160D T201G",5
"lib1","SARS-CoV-2","TCTTAAACACCCGGCT",4,92,8.48,-2.28,0.15,1.96,1.15,0.01,">1 nonsynonymous","P54A N107I",2
"lib1","SARS-CoV-2","TCTTAAACCCTACACA",5,124.78,9.51,-1.25,0.07,2.8,1.06,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","TCTTAAACCTCATACA",5,60.94,9.33,-1.43,0.11,2.66,1.07,0.01,">1 nonsynonymous","N4I N64K Q168T A190E",4
"lib1","SARS-CoV-2","TCTTAAACGTATCTGA",6,87.63,10.76,0,0.07,2.83,1.06,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TCTTAAAGGGGTTCTT",3,78.9,10.58,-0.19,0.04,2.92,1.02,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","TCTTAAATAAATTATC",1,0.35,NA,NA,NA,NA,NA,NA,"stop","N24V V77Q S113* G117S Q176L",5
"lib1","SARS-CoV-2","TCTTAAATCTCATAGC",2,39.17,9.26,-1.51,0.2,1.62,1.17,0.01,">1 nonsynonymous","V52N A89T",2
"lib1","SARS-CoV-2","TCTTAAATGCGCACCA",5,14.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T100P Q163S V181I",3
"lib1","SARS-CoV-2","TCTTAAATGCGTCAAA",13,254.6,10.4,-0.36,0.04,2.93,1.04,0,">1 nonsynonymous","G9L C61T D98N",3
"lib1","SARS-CoV-2","TCTTAACAAATTAACT",1,31.87,6,-4.76,2,1.5,1.24,0.03,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","TCTTAACAACAATTGA",3,29.84,10.51,-0.26,0.05,2.93,1.05,0,">1 nonsynonymous","G9E V37L C61I E141M T201H",5
"lib1","SARS-CoV-2","TCTTAACACCTAGCAT",5,62.06,8.78,-1.98,0.18,2.04,1.05,0.01,">1 nonsynonymous","N107D P133S P197T",3
"lib1","SARS-CoV-2","TCTTAACCGACCGTTG",9,128.46,6,-4.76,1.36,1.5,1.17,0.02,"1 nonsynonymous","P161L",1
"lib1","SARS-CoV-2","TCTTAACTAATAATCA",11,2.43,NA,NA,NA,NA,NA,NA,"stop","G9* S29W V52F",3
"lib1","SARS-CoV-2","TCTTAAGAACTATGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V P54A L122T S200A",4
"lib1","SARS-CoV-2","TCTTAAGAGAAAGGCC",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M N64Y C102W N118F",4
"lib1","SARS-CoV-2","TCTTAAGGGTTGAAAC",6,163.52,9.06,-1.71,0.11,2.49,1.13,0.01,">1 nonsynonymous","L38V F44P T100Q G174E",4
"lib1","SARS-CoV-2","TCTTAATAGTGTAACA",3,61.11,10.72,-0.05,0.05,2.88,1.04,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","TCTTAATATGATTTTC",7,41.05,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","R27I G101Q",2
"lib1","SARS-CoV-2","TCTTAATCTATGACAC",6,29.04,10.69,-0.08,0.06,2.91,1.06,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","TCTTAATGCATACTGG",1,22.44,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A33H G83A N107A S164V",4
"lib1","SARS-CoV-2","TCTTAATGGTGATATA",3,20.25,10.78,0.01,0.07,2.89,1.08,0,"1 nonsynonymous","V37E",1
"lib1","SARS-CoV-2","TCTTAATGTACAACCC",1,40.41,10.77,0.01,0.1,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTAATTCCCTCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5M S41* C49F Y175I",4
"lib1","SARS-CoV-2","TCTTAATTGGGGCGTA",1,19.86,9.75,-1.01,0.07,2.86,1.14,0,">1 nonsynonymous","L125V S147F",2
"lib1","SARS-CoV-2","TCTTACAAATTTTAAA",7,18.18,6.86,-3.91,0.42,1.5,1.2,0.03,">1 nonsynonymous","T15L Y35N Y50L C61M Y143N G172W V180M",7
"lib1","SARS-CoV-2","TCTTACAACAAAACAC",1,8.42,6.2,-4.56,0.72,1.5,1.15,0.04,">1 nonsynonymous","I2H G83H A89T F134L C158N G166V P191T",7
"lib1","SARS-CoV-2","TCTTACAACCTCAGCT",2,35.49,10.63,-0.13,0.09,2.8,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTACATAACTATAA",4,9.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D34S Q84L L95S",3
"lib1","SARS-CoV-2","TCTTACATGTGCAGCA",4,14.66,6.19,-4.57,1.61,1.5,1.28,0.06,">1 nonsynonymous","T63R I104N",2
"lib1","SARS-CoV-2","TCTTACCATTCTTTAC",4,53.89,10.53,-0.24,0.06,2.96,1.04,0,">1 nonsynonymous","N4V T201E",2
"lib1","SARS-CoV-2","TCTTACCCGGCTGCTT",4,66.08,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","Y123T Q168H G172R",3
"lib1","SARS-CoV-2","TCTTACCGAACTTACA",2,10.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17L Y66A G83W P96R",4
"lib1","SARS-CoV-2","TCTTACCGGGTTAAAA",2,6.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F K26R S41H P96R",4
"lib1","SARS-CoV-2","TCTTACGACCCACTTA",2,11.72,9.88,-0.89,0.21,2.01,1,0.02,">1 nonsynonymous","C61E T100G N110V",3
"lib1","SARS-CoV-2","TCTTACGAGTTAACGC",1,0.96,NA,NA,NA,NA,NA,NA,"stop","A105S S113* G146V",3
"lib1","SARS-CoV-2","TCTTACGATTCTACCA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","S19F A81* L122R",3
"lib1","SARS-CoV-2","TCTTACGATTTAAACT",1,23.4,10.06,-0.7,0.13,2.48,1.04,0.01,">1 nonsynonymous","V52L Q84F",2
"lib1","SARS-CoV-2","TCTTACGGTAAAGACA",2,46.8,9.93,-0.84,0.06,2.71,1.09,0,">1 nonsynonymous","A42S P161S",2
"lib1","SARS-CoV-2","TCTTACGTGGCAAATT",8,77.92,10.78,0.01,0.06,2.93,1.05,0,"1 nonsynonymous","N64C",1
"lib1","SARS-CoV-2","TCTTACTAGAACGGAG",3,23.24,9.42,-1.35,0.1,2.75,1.17,0,">1 nonsynonymous","S43Q T100V N157S",3
"lib1","SARS-CoV-2","TCTTACTCTTAGAGAG",2,10.84,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F62H I104K N107C K128G G174A",5
"lib1","SARS-CoV-2","TCTTACTGCCTCCACA",2,30.31,10.36,-0.41,0.06,2.95,1,0,">1 nonsynonymous","P7M N58R",2
"lib1","SARS-CoV-2","TCTTACTGTTAATCAC",6,6.35,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15H C49L C61Y A105V Q144S G196R",6
"lib1","SARS-CoV-2","TCTTACTTAATATCTT",5,97.1,9.64,-1.12,0.09,2.69,1.08,0,">1 nonsynonymous","R16L V37G Y143M K198S",4
"lib1","SARS-CoV-2","TCTTACTTTGAGAGAT",3,28.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C V65W",2
"lib1","SARS-CoV-2","TCTTAGAACGGTGCAT",1,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16T D34A C49L D68M Y119L",5
"lib1","SARS-CoV-2","TCTTAGAAGACTGATT",3,31.76,10.24,-0.53,0.08,2.87,1,0,">1 nonsynonymous","I2G F8W A14R K56R F62L S129R V153D H189S",8
"lib1","SARS-CoV-2","TCTTAGACCCAACTAT",7,40.2,6.49,-4.28,0.65,1.5,1.26,0.03,">1 nonsynonymous","E76Y F99P E141G",3
"lib1","SARS-CoV-2","TCTTAGATGCGCAAAA",3,8.19,9.32,-1.44,0.3,1.71,1.23,0.04,">1 nonsynonymous","I2H P149F V181L",3
"lib1","SARS-CoV-2","TCTTAGATGTATTCAA",5,21.48,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","N40S I72M V77G C150F",4
"lib1","SARS-CoV-2","TCTTAGCACAATCAAA",1,5.59,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","Y93R G155P",2
"lib1","SARS-CoV-2","TCTTAGCATTGAAAAA",2,29.2,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V32P R124L",2
"lib1","SARS-CoV-2","TCTTAGCCCTGCACAA",4,32.57,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A89G N118R K132T A145L T201E",5
"lib1","SARS-CoV-2","TCTTAGCTCAGGGCAT",2,58.71,10.45,-0.31,0.04,2.95,1,0,">1 nonsynonymous","C61Y K87V",2
"lib1","SARS-CoV-2","TCTTAGGACCTAAAAG",8,34.92,6.22,-4.55,0.38,3,1.15,0.01,">1 nonsynonymous","F47N Y91F V103Q V180F",4
"lib1","SARS-CoV-2","TCTTAGGGCAAACGGT",2,21.38,9.91,-0.85,0.07,2.54,1.04,0,">1 nonsynonymous","S41Y G51F",2
"lib1","SARS-CoV-2","TCTTAGGTTCGTTTCG",1,6.22,10.2,-0.57,0.34,1.75,1,0.02,">1 nonsynonymous","G9I V77R",2
"lib1","SARS-CoV-2","TCTTAGTATTTACCCA",8,141.48,10.68,-0.09,0.03,2.95,1.01,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","TCTTATAAATATCAAA",2,121.94,10.63,-0.13,0.03,2.95,1,0,">1 nonsynonymous","T46M F156W",2
"lib1","SARS-CoV-2","TCTTATAAGCTTGCCC",4,0,NA,NA,NA,NA,NA,NA,"stop","C6L F12L F17M I80R I88* N130I V173M T201S",8
"lib1","SARS-CoV-2","TCTTATACTAGCAGCC",1,6.75,7.42,-3.34,0.39,1.5,1,0.05,">1 nonsynonymous","V71R Y91K Y143I",3
"lib1","SARS-CoV-2","TCTTATATATATAGGA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I N64D I72Q P96I P197D",5
"lib1","SARS-CoV-2","TCTTATATCGTCAGTC",1,27.87,10.69,-0.08,0.07,2.92,1.05,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","TCTTATATTTACCTTA",1,17.73,10.19,-0.57,0.15,2.57,1.08,0.01,">1 nonsynonymous","N64P D90C",2
"lib1","SARS-CoV-2","TCTTATCAGACAAACA",1,5.88,10.02,-0.75,0.14,2.81,1.04,0,"1 nonsynonymous","S45F",1
"lib1","SARS-CoV-2","TCTTATCCTGATTTCC",5,140.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D34V F99L A145K",3
"lib1","SARS-CoV-2","TCTTATCGACGAATAA",2,15.12,8.34,-2.43,0.15,2.58,1.02,0.01,">1 nonsynonymous","D34Q Y119W",2
"lib1","SARS-CoV-2","TCTTATCTAACAGTCC",2,36.98,10.51,-0.25,0.07,2.96,1.02,0,">1 nonsynonymous","C61Y V115L",2
"lib1","SARS-CoV-2","TCTTATCTACTGAGGC",4,39.97,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Y39T N64H V77L N118L P133R",5
"lib1","SARS-CoV-2","TCTTATCTTATAAAGG",5,68.46,6,-4.76,1.29,1.5,1.26,0.02,">1 nonsynonymous","S29R D97H G174W P177T",4
"lib1","SARS-CoV-2","TCTTATGTATAACTTA",1,5.89,10.8,0.04,0.1,2.99,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTATGTCGCCTACG",10,102.05,10.47,-0.3,0.05,2.84,1.04,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","TCTTATTACTAGATGA",12,230.61,10.58,-0.19,0.03,2.88,1.03,0,">1 nonsynonymous","G83C I104Y",2
"lib1","SARS-CoV-2","TCTTATTATGGGTGAG",2,34.45,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D90H S113E",2
"lib1","SARS-CoV-2","TCTTATTGATCCTTAT",10,33.43,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y93N V115R F126D V173S T201D",5
"lib1","SARS-CoV-2","TCTTATTGGTGTTTAA",6,143.9,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y35V D97R G101L",3
"lib1","SARS-CoV-2","TCTTATTGGTTAAAAG",2,40.73,10.45,-0.31,0.11,2.73,1.22,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTCAAAAGAAAAAG",1,15.92,6,-4.76,2,3,1.11,0,">1 nonsynonymous","C49W A89K",2
"lib1","SARS-CoV-2","TCTTCAACAACAAATA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","T3P R27T G86* A105S V173G T201Y",6
"lib1","SARS-CoV-2","TCTTCAACACGACGAC",1,11.38,8.64,-2.13,0.44,1.5,1.2,0.06,">1 nonsynonymous","E10A P96G L122E E141T E154F P197Q",6
"lib1","SARS-CoV-2","TCTTCAAGGTCCGCAA",1,28.59,9.43,-1.34,0.09,2.81,1.1,0,">1 nonsynonymous","K56Q G116R",2
"lib1","SARS-CoV-2","TCTTCAATGCCATAAG",5,43.45,8.68,-2.08,0.16,1.7,1.18,0.01,">1 nonsynonymous","N1C F8M K94Q",3
"lib1","SARS-CoV-2","TCTTCACCAATCAATT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib1","SARS-CoV-2","TCTTCACGAACGCTTA",3,56.35,10.02,-0.75,0.04,2.85,1.02,0,">1 nonsynonymous","A89V T140M",2
"lib1","SARS-CoV-2","TCTTCACGTTCCCACT",2,8.12,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","Y93M",1
"lib1","SARS-CoV-2","TCTTCACTGATAAATT",3,40.93,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T55W G83I A89S N107K S108Y P149Q",6
"lib1","SARS-CoV-2","TCTTCAGATTACAACC",6,105.95,8.75,-2.02,0.1,2.81,1.02,0,">1 nonsynonymous","Y119E E154D",2
"lib1","SARS-CoV-2","TCTTCAGCTATGAAAA",10,43.17,6,-4.76,2,1.95,1.15,0.01,">1 nonsynonymous","C6N A33H T100G G172H S184V",5
"lib1","SARS-CoV-2","TCTTCAGGATAAGTTA",2,20.03,6.81,-3.96,0.16,1.77,1.05,0.01,">1 nonsynonymous","D59I P96N N109Y G116K R127P",5
"lib1","SARS-CoV-2","TCTTCAGGATTCTTAC",6,73.03,8.58,-2.18,0.34,1.5,1.07,0.05,">1 nonsynonymous","G116V Y165N",2
"lib1","SARS-CoV-2","TCTTCATAAAATACTG",9,7.83,NA,NA,NA,NA,NA,NA,"stop","L95M L122* N157S Y165A",4
"lib1","SARS-CoV-2","TCTTCATAATGTGCCA",2,29.51,10.58,-0.19,0.08,2.77,1.1,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","TCTTCATACCAAGATT",1,22.29,10.66,-0.1,0.06,2.96,1.05,0,"1 nonsynonymous","I2P",1
"lib1","SARS-CoV-2","TCTTCATACTACCCTA",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A E76T N130G",3
"lib1","SARS-CoV-2","TCTTCCAACTGTAATA",12,9.8,NA,NA,NA,NA,NA,NA,"stop","T3S F8N A14V F47Y R127K E135* T140L",7
"lib1","SARS-CoV-2","TCTTCCAAGTGATTAA",1,38.19,10.72,-0.04,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTCCAATATGTAAT",10,162.18,6,-4.76,1.34,1.5,1.13,0.01,">1 nonsynonymous","A81E A105T Y123T S164V",4
"lib1","SARS-CoV-2","TCTTCCACGTAATTTC",2,8.44,6,-4.76,2,1.5,1.25,0.07,">1 nonsynonymous","Y50T V77P",2
"lib1","SARS-CoV-2","TCTTCCAGTCACCGGT",1,40.97,8.79,-1.97,0.08,2.58,1.17,0,">1 nonsynonymous","I2R N118S T140F G152H",4
"lib1","SARS-CoV-2","TCTTCCATCTCTTACA",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C S129P",2
"lib1","SARS-CoV-2","TCTTCCATGACACTGA",2,23.13,10.48,-0.29,0.07,2.86,1.07,0,"1 nonsynonymous","Q168S",1
"lib1","SARS-CoV-2","TCTTCCATGATTTAAA",5,2.05,NA,NA,NA,NA,NA,NA,"stop","S41H T63L C102*",3
"lib1","SARS-CoV-2","TCTTCCATTATACCGA",2,55.98,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R25T R73N C158M P169S P197S",5
"lib1","SARS-CoV-2","TCTTCCCCGCAGCGTT",6,269.37,8.07,-2.69,0.21,1.54,1.22,0.02,">1 nonsynonymous","I2A N64K D90K V153G F160Y Y175M",6
"lib1","SARS-CoV-2","TCTTCCCGATAGTAGA",5,123.78,10.03,-0.74,0.05,2.79,1.01,0,">1 nonsynonymous","Y121C N130S T201M",3
"lib1","SARS-CoV-2","TCTTCCCGGAAACAGC",4,39.45,8.58,-2.19,0.25,1.5,1.13,0.02,"1 nonsynonymous","Y165K",1
"lib1","SARS-CoV-2","TCTTCCCTGCTAAATC",1,5.24,6,-4.76,2,1.5,1.06,0.04,">1 nonsynonymous","N30Q P82N E186S",3
"lib1","SARS-CoV-2","TCTTCCGAATCAATGA",1,5.15,6,-4.76,2,1.5,1.08,0.07,">1 nonsynonymous","C6N A89K E141V S184D",4
"lib1","SARS-CoV-2","TCTTCCTAATCCGACA",5,118.95,10.6,-0.16,0.04,2.95,1.02,0,"1 nonsynonymous","T148C",1
"lib1","SARS-CoV-2","TCTTCCTACACTTAAT",4,46.15,6,-4.76,2,3,1.13,0,">1 nonsynonymous","A105D W106E",2
"lib1","SARS-CoV-2","TCTTCCTATCTCAATA",12,3.15,NA,NA,NA,NA,NA,NA,"stop","K87L T201*",2
"lib1","SARS-CoV-2","TCTTCCTCTAAATTAC",1,18.48,10.8,0.04,0.1,2.93,1,0,">1 nonsynonymous","A14T A18P T85S E154S",4
"lib1","SARS-CoV-2","TCTTCCTTAGTTCACA",9,144.31,10.56,-0.2,0.04,2.88,1.03,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","TCTTCGCGTCTTTAAC",7,55.48,10.06,-0.71,0.1,2.12,1.02,0,">1 nonsynonymous","F99Y N109L",2
"lib1","SARS-CoV-2","TCTTCGGTATGATTAG",1,18.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y39W T100I N120G L183Y",4
"lib1","SARS-CoV-2","TCTTCGGTCCACCACA",2,24.33,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","T3W N40R F126N L131W",4
"lib1","SARS-CoV-2","TCTTCGGTGGAAGCAA",4,60.05,9.92,-0.84,0.11,2.55,1.01,0,">1 nonsynonymous","D90Y T100S",2
"lib1","SARS-CoV-2","TCTTCGTCACTACAGA",3,52.81,10.75,-0.02,0.06,2.83,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTCTAAAGAAGTTT",1,8.65,6,-4.76,2,3,1.18,0,">1 nonsynonymous","V11K N58R I80E V153Y",4
"lib1","SARS-CoV-2","TCTTCTACAATAAAAC",4,34.5,10.73,-0.04,0.05,2.94,1.02,0,"1 nonsynonymous","R136K",1
"lib1","SARS-CoV-2","TCTTCTACCTCTCAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V T15S T100* A105* T201*",5
"lib1","SARS-CoV-2","TCTTCTCCTAATGGCG",5,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G V103T S129Y",3
"lib1","SARS-CoV-2","TCTTCTCGGTGAGGTA",3,11.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1Y S19E S139N G166V",4
"lib1","SARS-CoV-2","TCTTCTGAGTACGATA",2,18.47,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S69K R127M A145M",3
"lib1","SARS-CoV-2","TCTTCTGCGGGCCATA",1,0.54,NA,NA,NA,NA,NA,NA,"stop","S36* I142N G155T",3
"lib1","SARS-CoV-2","TCTTCTGCTGATCACC",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59N G152C",2
"lib1","SARS-CoV-2","TCTTCTTCATGTCAAT",9,141.02,10.75,-0.01,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTCTTTAACGTAAT",3,51.43,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","K56P G117V S129I P161I",4
"lib1","SARS-CoV-2","TCTTCTTTAATAGGAA",6,133.01,9.66,-1.1,0.05,2.89,1.04,0,">1 nonsynonymous","D59V Y175H",2
"lib1","SARS-CoV-2","TCTTGAAACAAACCCT",2,5.73,7.46,-3.3,0.42,1.5,1.08,0.05,">1 nonsynonymous","G9T D97A V115C P149T S164C L188R",6
"lib1","SARS-CoV-2","TCTTGAAACCAGAAAG",2,28.59,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P7Y A42G V52H N92E",4
"lib1","SARS-CoV-2","TCTTGAAACCGATCTT",4,38.99,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","I88N P96L C158S Y178R",4
"lib1","SARS-CoV-2","TCTTGAAAGTACCGAA",6,32.41,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","L5S C61L R127L V153Y",4
"lib1","SARS-CoV-2","TCTTGAACTGTATGAG",1,5.92,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y35F I88T Y93K L125I F167R T201L",6
"lib1","SARS-CoV-2","TCTTGAATAATCTCAG",1,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A C49S L122R",3
"lib1","SARS-CoV-2","TCTTGAATAATGAATC",9,70.57,10.79,0.03,0.06,2.9,1.09,0,">1 nonsynonymous","Y39F C61T T201C",3
"lib1","SARS-CoV-2","TCTTGACGTGGTCAAA",4,34.13,10.74,-0.03,0.05,2.83,1.13,0,"1 nonsynonymous","F44W",1
"lib1","SARS-CoV-2","TCTTGACGTTCTCATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K P54E",2
"lib1","SARS-CoV-2","TCTTGACTCGCACTAC",3,61.07,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C31L W106S K114V Y143R",4
"lib1","SARS-CoV-2","TCTTGAGACCATAACG",3,18.39,10.88,0.11,0.11,2.9,1.05,0.01,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","TCTTGATAATAATCCA",4,35.7,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","K94E P169S",2
"lib1","SARS-CoV-2","TCTTGATTAAAGTACA",4,40.09,6,-4.76,2,3,1.15,0,">1 nonsynonymous","S45I N92T D98N I104K",4
"lib1","SARS-CoV-2","TCTTGATTTGTTAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S Y121I K128Y Q144S",4
"lib1","SARS-CoV-2","TCTTGCAAATGAAGAT",7,1.71,NA,NA,NA,NA,NA,NA,"stop","W23* C61M V181S",3
"lib1","SARS-CoV-2","TCTTGCACACAGTAAA",5,7.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A22R D34F F62V D90L F99T S113Y T201V",7
"lib1","SARS-CoV-2","TCTTGCAGCGTCCTCT",6,45.95,10.56,-0.2,0.1,2.8,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTGCCACAAGGAGG",7,120.52,10.62,-0.15,0.04,2.93,1,0,">1 nonsynonymous","G116V K128H",2
"lib1","SARS-CoV-2","TCTTGCCTGAACATAC",3,20.44,9.12,-1.65,0.1,2.18,1.07,0,">1 nonsynonymous","T15V F44G S129C F156M",4
"lib1","SARS-CoV-2","TCTTGCGATTTAAAGT",5,24.45,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89L D98T T140K Y165W T201V",5
"lib1","SARS-CoV-2","TCTTGCGCCACAAAAA",6,28.89,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","K94F C158S",2
"lib1","SARS-CoV-2","TCTTGCGCCAGATAAG",1,29.05,8.56,-2.2,0.27,2.32,1.03,0.02,"1 nonsynonymous","Y175K",1
"lib1","SARS-CoV-2","TCTTGCTCCTGGCGAG",2,17.02,9.17,-1.6,0.3,1.5,1.05,0.05,">1 nonsynonymous","F62I L131M Y165F",3
"lib1","SARS-CoV-2","TCTTGGAACCATCTAC",5,35.78,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","C150S P169Y A190T",3
"lib1","SARS-CoV-2","TCTTGGAATCCAATAA",1,41.15,8.25,-2.52,0.08,2.3,1.13,0,"1 nonsynonymous","Q176W",1
"lib1","SARS-CoV-2","TCTTGGATCACGTGTG",5,3.06,NA,NA,NA,NA,NA,NA,"stop","P7S R179*",2
"lib1","SARS-CoV-2","TCTTGGCGCTACAAGA",1,24.62,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","S45M P82S K87V D98E D137N",5
"lib1","SARS-CoV-2","TCTTGGCGGCCAGACT",13,113.97,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","I28K D59I T140G F156H",4
"lib1","SARS-CoV-2","TCTTGGTAACACATCC",7,106.66,7.14,-3.62,0.29,1.5,1.17,0.02,">1 nonsynonymous","I2S G9W C61F Y91D",4
"lib1","SARS-CoV-2","TCTTGGTTCCCATGAC",7,100.46,10.57,-0.2,0.08,2.84,1.01,0,">1 nonsynonymous","T55S Y123L",2
"lib1","SARS-CoV-2","TCTTGGTTTCCCTTTT",2,0.62,NA,NA,NA,NA,NA,NA,"stop","D34F C49*",2
"lib1","SARS-CoV-2","TCTTGTCAACTTATGC",7,72.73,10.01,-0.76,0.12,1.85,1.09,0.01,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","TCTTGTGAGCGATCTG",7,18.32,9.27,-1.49,0.3,1.5,1,0.06,">1 nonsynonymous","S139R T148S V182D",3
"lib1","SARS-CoV-2","TCTTGTGCACACTTAA",5,51.97,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A14L S69K R179G",3
"lib1","SARS-CoV-2","TCTTGTTCCTACTTTA",2,18.53,10.42,-0.35,0.04,2.88,1.04,0,">1 nonsynonymous","K128A I138F",2
"lib1","SARS-CoV-2","TCTTGTTCGCGATAGT",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G G83I G146Y",3
"lib1","SARS-CoV-2","TCTTGTTCTCACGGCT",2,13.53,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","C49V P96H K132R P133S Y165T",5
"lib1","SARS-CoV-2","TCTTTAAACCGATAAA",8,102.7,10.39,-0.37,0.07,2.88,1.04,0,">1 nonsynonymous","L5K S36T T63I Q84E",4
"lib1","SARS-CoV-2","TCTTTAAATATGGAAA",4,66.17,8.56,-2.21,0.14,1.78,1.13,0.01,">1 nonsynonymous","I28S I138E G155N",3
"lib1","SARS-CoV-2","TCTTTAACACCCGTCG",7,68.06,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","G51T C102I N120L R136S",4
"lib1","SARS-CoV-2","TCTTTAACAGTTATCC",14,331.91,8.75,-2.02,0.07,2.66,1.1,0,">1 nonsynonymous","R16S Y35G F44N E154L",4
"lib1","SARS-CoV-2","TCTTTAACCTAAGGTG",1,4.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82C",1
"lib1","SARS-CoV-2","TCTTTAACTAATTTGA",1,12.42,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K94F L162S",2
"lib1","SARS-CoV-2","TCTTTAAGAAACGAAC",14,313.85,10.08,-0.69,0.05,2.9,1.02,0,">1 nonsynonymous","D59E L125S L188V",3
"lib1","SARS-CoV-2","TCTTTAAGGAAAATTC",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P177N L183T",2
"lib1","SARS-CoV-2","TCTTTAATACCACAAC",7,21.12,7.29,-3.48,0.22,1.5,1.12,0.01,">1 nonsynonymous","A14C D97R T140F Q168V",4
"lib1","SARS-CoV-2","TCTTTAATACCCACCT",1,22.63,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D68Y F99Y Q168M",3
"lib1","SARS-CoV-2","TCTTTAATTCTTCGAC",13,24.61,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C49E I104N P169L",3
"lib1","SARS-CoV-2","TCTTTACAAGCTCGTT",1,5.86,6,-4.76,2,1.5,1.08,0.02,">1 nonsynonymous","G86P V115L Y123T",3
"lib1","SARS-CoV-2","TCTTTACACGAAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44* G83T Y165W V173I",4
"lib1","SARS-CoV-2","TCTTTACCCTTGACAC",3,74.22,10.67,-0.09,0.05,2.95,1,0,">1 nonsynonymous","I2N Q84R Y175F",3
"lib1","SARS-CoV-2","TCTTTACCGATCTCTA",1,23.54,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","F17V A33L Y93N N157C",4
"lib1","SARS-CoV-2","TCTTTACCTAAATCAA",1,16.86,8.3,-2.47,0.12,2.67,1.06,0.01,">1 nonsynonymous","S41I Y119S T170K A190I",4
"lib1","SARS-CoV-2","TCTTTACTTATGACCC",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W C158W",2
"lib1","SARS-CoV-2","TCTTTAGCAACAGATA",6,129.6,9.54,-1.23,0.09,2.72,1.06,0,">1 nonsynonymous","E154V Y178S",2
"lib1","SARS-CoV-2","TCTTTATCCAAATCAG",10,55.09,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","C49K T140P",2
"lib1","SARS-CoV-2","TCTTTATCGTATGATT",3,43.18,6,-4.76,1.76,1.5,1.14,0.01,">1 nonsynonymous","S113Q R136S",2
"lib1","SARS-CoV-2","TCTTTATTACCGAGTA",2,0.34,NA,NA,NA,NA,NA,NA,"stop","A22R I88C F134*",3
"lib1","SARS-CoV-2","TCTTTCAACCCGATTT",1,15.19,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","K128C P161Y",2
"lib1","SARS-CoV-2","TCTTTCAACTCCGCAT",1,52.28,6.15,-4.62,0.72,1.5,1.09,0.02,">1 nonsynonymous","I2Y L57G R127T Y175I T201C",5
"lib1","SARS-CoV-2","TCTTTCAAGATACTCG",2,1.05,NA,NA,NA,NA,NA,NA,"stop","P96* D112L I142M C158T Y178T",5
"lib1","SARS-CoV-2","TCTTTCAATAAACAAA",3,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R W106D",2
"lib1","SARS-CoV-2","TCTTTCACACTATTTA",4,47.84,9.69,-1.08,0.1,1.83,1.08,0,">1 nonsynonymous","D59E A105L S139T",3
"lib1","SARS-CoV-2","TCTTTCACGCAAGTAA",4,24.14,7.36,-3.41,0.29,1.5,1.17,0.02,">1 nonsynonymous","L38S Y91N",2
"lib1","SARS-CoV-2","TCTTTCAGGATACGAA",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L P96I G146K N151L",4
"lib1","SARS-CoV-2","TCTTTCCATGGGCCAG",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96D P133T",2
"lib1","SARS-CoV-2","TCTTTCCCTAAGAGCA",5,54.07,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","S43R L60Q V71Q K94W N107L",5
"lib1","SARS-CoV-2","TCTTTCCTATGAATTG",1,6.14,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","F8M L60N Y91I G166L G172L",5
"lib1","SARS-CoV-2","TCTTTCCTTTTACCAT",2,46.77,10.06,-0.7,0.08,2.8,1.02,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","TCTTTCGCGAGAGACA",4,21.06,6.88,-3.89,0.46,1.5,1.18,0.05,">1 nonsynonymous","L5K V32Q V103G L162S",4
"lib1","SARS-CoV-2","TCTTTCGCGATAATTT",4,31.58,6.32,-4.44,0.61,1.5,1.14,0.01,">1 nonsynonymous","C61A V103S T201N",3
"lib1","SARS-CoV-2","TCTTTCGTGACGCATG",5,1.4,NA,NA,NA,NA,NA,NA,"stop","T3F S36F D68* Y143W T170D",5
"lib1","SARS-CoV-2","TCTTTCGTGACTGCCC",2,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A A22R V52H L57A Y91H D98Y",6
"lib1","SARS-CoV-2","TCTTTCTAATCCGTTA",2,44.04,9.88,-0.88,0.13,1.89,1.11,0,"1 nonsynonymous","W106C",1
"lib1","SARS-CoV-2","TCTTTCTACTAACACT",2,18.89,9.83,-0.93,0.17,1.98,1.13,0.01,">1 nonsynonymous","T3S C61R G152C S184K",4
"lib1","SARS-CoV-2","TCTTTCTGAGATGATC",8,133.02,10.74,-0.03,0.08,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTTGACCAAAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51L L183V",2
"lib1","SARS-CoV-2","TCTTTGACGCCAATAA",3,23.98,10.78,0.01,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTTGACGTCAAAAA",6,100.65,7.48,-3.29,0.19,1.5,1.17,0.01,">1 nonsynonymous","N40G Y121I F134Y L162T",4
"lib1","SARS-CoV-2","TCTTTGACTAATAAAG",8,35.16,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L5Q I88S F99R",3
"lib1","SARS-CoV-2","TCTTTGCAAACATGGC",3,24.58,6,-4.76,2,1.5,1.07,0.02,">1 nonsynonymous","N64S V77I Y93I D97L I142K",5
"lib1","SARS-CoV-2","TCTTTGCACCCTTGCC",5,72.41,10.81,0.04,0.08,2.88,1.06,0,">1 nonsynonymous","K87A N171T",2
"lib1","SARS-CoV-2","TCTTTGCTCTGGATTG",6,57.45,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D97S P161I",2
"lib1","SARS-CoV-2","TCTTTGCTTGGAACAA",1,30.28,8.64,-2.13,0.11,2.72,1.17,0.01,">1 nonsynonymous","K114W N120P",2
"lib1","SARS-CoV-2","TCTTTTAAACAAGAGA",7,1.81,NA,NA,NA,NA,NA,NA,"stop","Y50* N120P",2
"lib1","SARS-CoV-2","TCTTTTAAAGGTGGAA",10,92.42,10.34,-0.42,0.05,2.81,1.04,0,">1 nonsynonymous","C61K T140P",2
"lib1","SARS-CoV-2","TCTTTTAACAGTGTGA",2,120.89,10.4,-0.37,0.04,2.9,1.04,0,"1 nonsynonymous","A14T",1
"lib1","SARS-CoV-2","TCTTTTAACTAAATGT",2,40.77,6.45,-4.32,0.46,1.5,1.12,0.02,"1 nonsynonymous","R179P",1
"lib1","SARS-CoV-2","TCTTTTACAACTTAAA",9,72.78,7.35,-3.42,0.23,1.5,1.22,0.02,">1 nonsynonymous","C61K D97C G117F P149C",4
"lib1","SARS-CoV-2","TCTTTTACTTGGCCCT",1,4.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","TCTTTTAGGCCGTAAG",3,58.32,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D90F Y143K",2
"lib1","SARS-CoV-2","TCTTTTATCAAACGCA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34K V77T I104V",3
"lib1","SARS-CoV-2","TCTTTTCAATTTTCCT",3,160.22,10.69,-0.08,0.07,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTTTCTATCGTTGA",4,29.49,10.48,-0.29,0.12,2.82,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TCTTTTGAAACTATTA",5,74.17,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L125Q E135R Y175I",3
"lib1","SARS-CoV-2","TCTTTTGACTGCAAAA",4,15.56,9.14,-1.63,0.4,1.5,1.3,0.07,">1 nonsynonymous","A14S V52S D90S",3
"lib1","SARS-CoV-2","TCTTTTTAAGGCTGAC",2,112.67,10.73,-0.03,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TCTTTTTACGCATAAC",1,63.41,10.64,-0.12,0.07,2.85,1.14,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TCTTTTTCCACGGTAT",3,26.16,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6N G146F P149M",3
"lib1","SARS-CoV-2","TCTTTTTTTGGAGGTG",8,165.1,10.3,-0.46,0.04,2.89,1.03,0,">1 nonsynonymous","G83S L122E A145V",3
"lib1","SARS-CoV-2","TGAAAAAAACGTTATA",3,1.26,NA,NA,NA,NA,NA,NA,"stop","C6S C61L N107T N120Q E141*",5
"lib1","SARS-CoV-2","TGAAAAAAAGTAAATA",2,15.49,7.2,-3.57,0.48,2.12,1.05,0.08,">1 nonsynonymous","F12Y A89C N109L C150N V180W",5
"lib1","SARS-CoV-2","TGAAAAAAATCCCATA",1,20.6,10.69,-0.08,0.08,2.95,1.02,0,">1 nonsynonymous","G146A V173L",2
"lib1","SARS-CoV-2","TGAAAAAACAACAACT",3,22.4,9.19,-1.57,0.25,1.5,1.14,0.03,">1 nonsynonymous","A14T F47H",2
"lib1","SARS-CoV-2","TGAAAAAACACTAAAA",1,5.84,10.7,-0.06,0.09,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAAAAACAGTTTAT",5,526.59,10.75,-0.02,0.04,2.92,1.05,0,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","TGAAAAAAGTATGCAA",10,2.04,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib1","SARS-CoV-2","TGAAAAAATAAAAAAT",5,39.35,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L38I D90P P169V",3
"lib1","SARS-CoV-2","TGAAAAAATGCTCTAG",2,36.46,10.44,-0.33,0.06,2.8,1.02,0,"1 nonsynonymous","V11T",1
"lib1","SARS-CoV-2","TGAAAAAATTGGATTG",2,23.69,10.81,0.04,0.1,2.95,1.02,0,"1 nonsynonymous","N130Q",1
"lib1","SARS-CoV-2","TGAAAAACAATCATCC",1,49.51,9.24,-1.53,0.33,1.5,1,0.05,">1 nonsynonymous","F8Y D98Q R136N G196L",4
"lib1","SARS-CoV-2","TGAAAAACCAAATACC",2,11.94,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Y35N S45G P82S P149L",4
"lib1","SARS-CoV-2","TGAAAAACCATAAAAA",2,62.4,10.3,-0.47,0.04,2.83,1.03,0,">1 nonsynonymous","L60S I104M F160C",3
"lib1","SARS-CoV-2","TGAAAAACGACGTTAC",1,6.42,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13H N118I",2
"lib1","SARS-CoV-2","TGAAAAACGCAAAAGC",4,14.92,10.37,-0.39,0.08,3,1,0,">1 nonsynonymous","S53Y L122F V153L",3
"lib1","SARS-CoV-2","TGAAAAACTTGCTACA",4,17.91,6.12,-4.64,1.49,1.5,1.31,0.05,">1 nonsynonymous","C6I A18P N40P L95S V103Y E135G",6
"lib1","SARS-CoV-2","TGAAAAAGAAGAGAAA",7,138.8,10.76,0,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAAAAGACTCTTGA",2,19.96,10.43,-0.33,0.11,2.92,1.05,0.01,">1 nonsynonymous","G9N K87S",2
"lib1","SARS-CoV-2","TGAAAAAGGATAGAGA",8,22.33,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","P96Y S113F N118E P133G",4
"lib1","SARS-CoV-2","TGAAAAAGTTAAAATT",4,10.49,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W23K S41K D90I D97F V153Y F156L",6
"lib1","SARS-CoV-2","TGAAAAATAAAAACAT",2,46.56,10.36,-0.41,0.07,2.84,1.06,0,">1 nonsynonymous","D97G N120I",2
"lib1","SARS-CoV-2","TGAAAAATACATAGAC",5,115.23,10.46,-0.3,0.05,2.9,1.04,0,">1 nonsynonymous","R27M S36L",2
"lib1","SARS-CoV-2","TGAAAAATAGAATACC",2,17.48,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L5W A18V I138S L162P",4
"lib1","SARS-CoV-2","TGAAAAATAGAATCGC",4,56.8,10.22,-0.54,0.05,2.85,1.04,0,"1 nonsynonymous","C31H",1
"lib1","SARS-CoV-2","TGAAAAATAGATTATA",2,7.39,7.89,-2.88,0.71,1.5,1,0.07,">1 nonsynonymous","T3H W23R N64T Q176L",4
"lib1","SARS-CoV-2","TGAAAAATATAATATA",2,8.03,9.13,-1.63,0.2,1.74,1.29,0.03,"1 nonsynonymous","C6S",1
"lib1","SARS-CoV-2","TGAAAAATCTCTAGTT",4,10.31,6,-4.76,0.96,3,1.04,0,">1 nonsynonymous","V11P S45D C49T P96R",4
"lib1","SARS-CoV-2","TGAAAAATGAATATAT",3,1.66,NA,NA,NA,NA,NA,NA,"stop","L57P Y91*",2
"lib1","SARS-CoV-2","TGAAAAATTAATATCT",4,21.19,6.79,-3.98,0.46,1.5,1.13,0.06,">1 nonsynonymous","D90L V103S L122E V173T",4
"lib1","SARS-CoV-2","TGAAAAATTACCACAT",4,5.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G D97T",2
"lib1","SARS-CoV-2","TGAAAAATTCATTACA",2,41.77,8.71,-2.05,0.08,2.58,1.1,0,">1 nonsynonymous","N107E G155D",2
"lib1","SARS-CoV-2","TGAAAAATTTAACCCA",4,31.97,6.02,-4.74,0.61,1.5,1.09,0,">1 nonsynonymous","E10G R25T K56W Q84D L122H L187Q",6
"lib1","SARS-CoV-2","TGAAAACAAACGTAAG",6,27.68,9.27,-1.5,0.19,1.65,1.12,0.01,"1 nonsynonymous","L131S",1
"lib1","SARS-CoV-2","TGAAAACAAAGTCATT",2,9.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N64F V71G",2
"lib1","SARS-CoV-2","TGAAAACAAATAACTT",5,34.42,6.34,-4.43,0.68,1.5,1.13,0.03,">1 nonsynonymous","F12Y A89L F167I K199P",4
"lib1","SARS-CoV-2","TGAAAACAACAACAAT",2,2664.6,10.69,-0.07,0.03,2.93,1.04,0,"1 nonsynonymous","F99W",1
"lib1","SARS-CoV-2","TGAAAACAACGAATTA",7,29.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103Y Y143D",2
"lib1","SARS-CoV-2","TGAAAACACAGCGTCT",6,54.76,8.9,-1.87,0.16,1.52,1.09,0.01,"1 nonsynonymous","G86M",1
"lib1","SARS-CoV-2","TGAAAACACCCCTCAA",1,24.34,10.33,-0.43,0.05,2.89,1,0,">1 nonsynonymous","S43P G174L",2
"lib1","SARS-CoV-2","TGAAAACACCGGCCTA",4,17.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5Y I88R S108L",3
"lib1","SARS-CoV-2","TGAAAACACGACTTGT",1,17.6,10.16,-0.61,0.11,2.68,1.08,0.01,">1 nonsynonymous","V77I E135K",2
"lib1","SARS-CoV-2","TGAAAACCAATTTCGG",8,54.06,10.71,-0.06,0.09,2.73,1.09,0,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","TGAAAACCCGCCCGTA",2,77.2,6,-4.76,1.17,1.5,1.19,0.02,">1 nonsynonymous","G83I K132G G174K V180G",4
"lib1","SARS-CoV-2","TGAAAACCGAATGAGG",7,56.71,10.79,0.02,0.06,2.98,1,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","TGAAAACCTAGTCCAG",2,61.68,10.16,-0.61,0.07,2.79,1.04,0,">1 nonsynonymous","L60Q E141K T148P",3
"lib1","SARS-CoV-2","TGAAAACGACAACCCC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23R",1
"lib1","SARS-CoV-2","TGAAAACGATATTAGG",4,17.14,11,0.24,0.08,2.96,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAAACGCTTTGCCT",1,15.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49T E135L",2
"lib1","SARS-CoV-2","TGAAAACTAAAGAACT",2,124.51,10.76,0,0.07,2.84,1.09,0,"1 nonsynonymous","L5H",1
"lib1","SARS-CoV-2","TGAAAACTAAGGCTTA",3,50.51,8.93,-1.84,0.1,2.45,1.13,0.01,">1 nonsynonymous","Y121P G196C",2
"lib1","SARS-CoV-2","TGAAAACTCTACACAG",7,150.48,10.64,-0.12,0.04,2.93,1,0,">1 nonsynonymous","Y91L T148R",2
"lib1","SARS-CoV-2","TGAAAACTGAACTTAA",3,32.09,9.89,-0.88,0.08,2.03,1.11,0,">1 nonsynonymous","A33V L95V A105C",3
"lib1","SARS-CoV-2","TGAAAACTGCCGGCTA",2,30.78,10.17,-0.59,0.06,2.88,1,0,">1 nonsynonymous","S41R F47I S129P",3
"lib1","SARS-CoV-2","TGAAAACTGTGGAAAG",3,35.62,8.09,-2.68,0.15,1.93,1.07,0.01,">1 nonsynonymous","C6P G117E",2
"lib1","SARS-CoV-2","TGAAAACTTCAAAGAC",8,253.09,9.7,-1.07,0.03,2.85,1.06,0,">1 nonsynonymous","R73A N120K",2
"lib1","SARS-CoV-2","TGAAAACTTGGAACTG",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I I72F Y119S S129G",4
"lib1","SARS-CoV-2","TGAAAACTTGGCAGCT",1,20.15,7.22,-3.54,0.21,1.5,1.06,0.01,">1 nonsynonymous","Q84N P149C N157A",3
"lib1","SARS-CoV-2","TGAAAACTTTAAAGTA",2,10.3,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Q84H A105K D112V S129E P197L",5
"lib1","SARS-CoV-2","TGAAAAGAAGGAATCC",2,12.94,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","A14I W23M S29Y T63D F126G V173A",6
"lib1","SARS-CoV-2","TGAAAAGACTACAAAC",1,13.83,10.04,-0.73,0.1,2.48,1.05,0,">1 nonsynonymous","T46K N58L",2
"lib1","SARS-CoV-2","TGAAAAGAGATTTGCG",13,0,NA,NA,NA,NA,NA,NA,"stop","F17* A81F I88W T148C V173S",5
"lib1","SARS-CoV-2","TGAAAAGCCAACACCA",2,9.37,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44T L162H Q163K T201R",4
"lib1","SARS-CoV-2","TGAAAAGCCAACCACT",3,15.55,6.89,-3.87,0.47,1.5,1.12,0.05,">1 nonsynonymous","Y50D N130H G174L",3
"lib1","SARS-CoV-2","TGAAAAGCCACAAAGG",2,1.81,NA,NA,NA,NA,NA,NA,"stop","E10R R16F S43P K56H V103D L122R Y143* F160T G196V",9
"lib1","SARS-CoV-2","TGAAAAGCCGAAATCC",1,95.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44A L122R F134S G172V",4
"lib1","SARS-CoV-2","TGAAAAGCCTTTTTTC",1,36.01,10.71,-0.06,0.04,2.88,1.08,0,">1 nonsynonymous","V37S D90M",2
"lib1","SARS-CoV-2","TGAAAAGCTAAACCAA",3,14.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K87N Y91A I104Y S139E T201C",5
"lib1","SARS-CoV-2","TGAAAAGCTTACCGAG",4,51.62,6.6,-4.16,0.29,1.5,1.22,0.01,">1 nonsynonymous","P54M T100V N107Y",3
"lib1","SARS-CoV-2","TGAAAAGGTCTGTAAG",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Q T170A",2
"lib1","SARS-CoV-2","TGAAAAGTGATTGACA",1,31.48,6.22,-4.54,0.64,1.5,1.19,0.02,">1 nonsynonymous","Y39Q G86H D98T W106Y",4
"lib1","SARS-CoV-2","TGAAAAGTGTAATTAG",3,52.91,10.62,-0.15,0.07,2.88,1.09,0,">1 nonsynonymous","V37Y P149R T201S",3
"lib1","SARS-CoV-2","TGAAAAGTGTTAGAAC",5,141.17,10.5,-0.26,0.03,2.9,1.03,0,">1 nonsynonymous","K132A P149V V173A",3
"lib1","SARS-CoV-2","TGAAAAGTTCTCGAAA",8,72.43,9.49,-1.28,0.15,1.8,1.11,0.01,">1 nonsynonymous","F12Y S41P T55M I142L",4
"lib1","SARS-CoV-2","TGAAAATAAAGAAAGT",11,87.07,6.21,-4.56,0.75,1.5,1.16,0.03,">1 nonsynonymous","L5K R25K S113D G155Q T170A A190V",6
"lib1","SARS-CoV-2","TGAAAATAATTTGATG",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W L95F S129N C150Y",4
"lib1","SARS-CoV-2","TGAAAATACCGAATAG",5,51.62,8.49,-2.28,0.12,2.07,1.07,0.01,">1 nonsynonymous","I104A S113G Y143W",3
"lib1","SARS-CoV-2","TGAAAATAGAACACTT",5,45.68,10.53,-0.23,0.1,2.85,1,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","TGAAAATATAAGGATA",2,23.27,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","N24T Q144K N157I",3
"lib1","SARS-CoV-2","TGAAAATATATTGGTA",4,7.73,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T3H T85N Y93I I104T",4
"lib1","SARS-CoV-2","TGAAAATATCATAAAC",1,3.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91N",1
"lib1","SARS-CoV-2","TGAAAATATCATACCC",4,17.75,6.75,-4.01,0.67,1.5,1.14,0.03,">1 nonsynonymous","A67L G117W K128L P161E",4
"lib1","SARS-CoV-2","TGAAAATATTTCCAAA",5,27.43,9.27,-1.49,0.21,1.51,1.23,0.02,">1 nonsynonymous","A67I G83F E135L Q163M",4
"lib1","SARS-CoV-2","TGAAAATATTTCCAAT",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y A67S K132Y P169I",4
"lib1","SARS-CoV-2","TGAAAATCAGCGCGGT",3,74.73,10.72,-0.04,0.04,2.98,1,0,"1 nonsynonymous","V153T",1
"lib1","SARS-CoV-2","TGAAAATCATGTGAGT",7,76.28,10.71,-0.05,0.07,2.87,1.09,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","TGAAAATCGACTTGAG",4,72.06,10.17,-0.6,0.06,2.68,1.05,0,">1 nonsynonymous","R25S N130R",2
"lib1","SARS-CoV-2","TGAAAATCTGACGTAT",3,5.14,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14L N107F",2
"lib1","SARS-CoV-2","TGAAAATGACCCAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N64* I72E K128Y E141P S147L A192T",6
"lib1","SARS-CoV-2","TGAAAATGAGCTTGAA",2,12.42,9.91,-0.86,0.38,1.5,1,0.08,"1 nonsynonymous","I104Q",1
"lib1","SARS-CoV-2","TGAAAATGGCAATATC",13,5.58,NA,NA,NA,NA,NA,NA,"stop","F8L C150*",2
"lib1","SARS-CoV-2","TGAAAATGTCTCTATT",3,0.32,NA,NA,NA,NA,NA,NA,"stop","T15* Y35M",2
"lib1","SARS-CoV-2","TGAAAATGTGACAACA",3,57.34,6,-4.76,2,3,1.13,0,">1 nonsynonymous","T55A D68H L131N P149Y Q168H P177L K199Q",7
"lib1","SARS-CoV-2","TGAAAATGTTGGTATA",2,23.06,10.89,0.13,0.09,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAAATTAAACGTAG",1,10.08,10.17,-0.59,0.14,2.06,1,0,">1 nonsynonymous","L122F N151M F185P T201N",4
"lib1","SARS-CoV-2","TGAAAATTAACATTTA",1,17.71,10.89,0.13,0.08,2.97,1.01,0,"1 nonsynonymous","Y39M",1
"lib1","SARS-CoV-2","TGAAAATTCGTTTATA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","L60* D97V S164T S200T",4
"lib1","SARS-CoV-2","TGAAAATTGACAAAGT",6,2.89,NA,NA,NA,NA,NA,NA,"stop","P149* Q176L",2
"lib1","SARS-CoV-2","TGAAAATTTGTAAAAG",2,2.17,NA,NA,NA,NA,NA,NA,"stop","L5Q A22R P82A K87* L95K N120P",6
"lib1","SARS-CoV-2","TGAAAATTTTACGTAA",8,27.17,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K56M G101S N107P T201G",4
"lib1","SARS-CoV-2","TGAAACAAAATACAGG",2,1.35,NA,NA,NA,NA,NA,NA,"stop","Q84H E141* Y165D",3
"lib1","SARS-CoV-2","TGAAACAAAATTACAT",3,10.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50D L57N D112I S129V E141D",5
"lib1","SARS-CoV-2","TGAAACAACTATACTG",1,24.26,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39L L95P F160N T170R",4
"lib1","SARS-CoV-2","TGAAACAAGTGGGTGA",12,18.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95S W106G E135S G146Y",4
"lib1","SARS-CoV-2","TGAAACAATTATAACA",2,36.18,10.5,-0.27,0.06,2.87,1.09,0,"1 nonsynonymous","P7R",1
"lib1","SARS-CoV-2","TGAAACAATTCAGAAT",2,62.17,8.8,-1.96,0.1,2.32,1.16,0,">1 nonsynonymous","A33S F62W D90K Y143L",4
"lib1","SARS-CoV-2","TGAAACACAATCAATG",2,59.28,8.8,-1.97,0.1,2.5,1.14,0,">1 nonsynonymous","N1M I72C K87E",3
"lib1","SARS-CoV-2","TGAAACACAGCCGCGT",1,13.47,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","K48A G101S",2
"lib1","SARS-CoV-2","TGAAACACGAATTGGT",3,0,NA,NA,NA,NA,NA,NA,"stop","N1D G9A T63Y A67T G74M T100F Y119* P149T Y178V",9
"lib1","SARS-CoV-2","TGAAACACGATTAAAT",6,151.78,10.74,-0.02,0.06,2.89,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAAACACGCTTAAAC",3,33.86,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K128T T148P P161L Q168F",4
"lib1","SARS-CoV-2","TGAAACAGAATATGTC",8,16.53,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","C6T D34H F185S",3
"lib1","SARS-CoV-2","TGAAACAGAGTCCTGT",4,43.62,10.2,-0.57,0.09,2.61,1.03,0,">1 nonsynonymous","T55R P96T",2
"lib1","SARS-CoV-2","TGAAACAGCAATTATA",6,2.14,NA,NA,NA,NA,NA,NA,"stop","E10I T100Q S113P F160I Q176*",5
"lib1","SARS-CoV-2","TGAAACAGGTAAGTAA",3,33.25,10.25,-0.51,0.19,2.71,1.2,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TGAAACATAAACGCGT",2,21.8,10.74,-0.02,0.06,2.91,1,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","TGAAACATATAACTTG",4,1.14,NA,NA,NA,NA,NA,NA,"stop","G86A G101S Q176*",3
"lib1","SARS-CoV-2","TGAAACATATCAATTA",5,18.82,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9F L95Y",2
"lib1","SARS-CoV-2","TGAAACATCAAAATTG",2,19.76,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P7G T46N N92L V103L L122V E135G",6
"lib1","SARS-CoV-2","TGAAACATCTGTTACT",4,42.55,10.36,-0.41,0.05,2.97,1.03,0,">1 nonsynonymous","T15R V52L",2
"lib1","SARS-CoV-2","TGAAACCAAACTACAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F134* N151A",2
"lib1","SARS-CoV-2","TGAAACCACAAGAGAT",8,41.13,6.57,-4.2,0.75,1.5,1.18,0.07,">1 nonsynonymous","L60P V103G N107S",3
"lib1","SARS-CoV-2","TGAAACCAGACTGAAT",5,59.44,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S108L G116P F126E E141T C158G",5
"lib1","SARS-CoV-2","TGAAACCATTTTTTAG",5,11.01,10.47,-0.3,0.3,2.55,1.17,0.03,">1 nonsynonymous","N13A V20K K26R C49M C61T S113E L122A V153P T201V",9
"lib1","SARS-CoV-2","TGAAACCCAACGCGAA",3,76.23,10.34,-0.43,0.05,2.93,1,0,">1 nonsynonymous","F47I V180I",2
"lib1","SARS-CoV-2","TGAAACCCAGTAAGAA",3,0.99,NA,NA,NA,NA,NA,NA,"stop","C6* F70P F134C",3
"lib1","SARS-CoV-2","TGAAACCCCCCGTCCA",4,91,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L38F K94C F167M",3
"lib1","SARS-CoV-2","TGAAACCCGAATTGTG",2,25.79,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4A R25M Y39K C49S T55L N109K I138Y",7
"lib1","SARS-CoV-2","TGAAACCCGCCTGCGC",4,53.46,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19M V115F E141I E154D",4
"lib1","SARS-CoV-2","TGAAACCCGGGACGCC",2,21.62,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T3Y G51L N64Y S129F G155P Y175R",6
"lib1","SARS-CoV-2","TGAAACCCGTGAATGG",3,47.71,9.32,-1.45,0.16,1.5,1.16,0.01,">1 nonsynonymous","V11S G83Q",2
"lib1","SARS-CoV-2","TGAAACCCTTCACCAA",9,253.95,10.17,-0.59,0.08,2.53,1.03,0,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","TGAAACCGAATCAAAA",2,48.52,10.77,0,0.07,2.89,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAAACCTCATTAAAT",3,17.55,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P133W S147I F156L Y165Q",4
"lib1","SARS-CoV-2","TGAAACCTTCCTGAAA",2,5.1,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R16L T55E L95S",3
"lib1","SARS-CoV-2","TGAAACGAAGAGAATA",4,45.09,10.25,-0.52,0.04,2.9,1.02,0,">1 nonsynonymous","A18K F160V",2
"lib1","SARS-CoV-2","TGAAACGACTCTTAGC",3,2.06,NA,NA,NA,NA,NA,NA,"stop","G9S A14S V37G R78Q G83M V103* Y143E Q168*",8
"lib1","SARS-CoV-2","TGAAACGAGCTATTAT",4,38.77,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","V20M Y66C",2
"lib1","SARS-CoV-2","TGAAACGAGGACAAGC",2,1.22,NA,NA,NA,NA,NA,NA,"stop","A81T S113* L122*",3
"lib1","SARS-CoV-2","TGAAACGATGACAAAC",5,118.31,10.26,-0.51,0.03,2.95,1.03,0,">1 nonsynonymous","S19N Y35W A42T K56V C61D",5
"lib1","SARS-CoV-2","TGAAACGCAAAATACC",1,10.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36F N107I",2
"lib1","SARS-CoV-2","TGAAACGCGCGAGCTC",4,38.32,10.73,-0.04,0.14,2.88,1.06,0.01,">1 nonsynonymous","T3P L60M K198L",3
"lib1","SARS-CoV-2","TGAAACGCTGACTAAC",1,41.05,10.69,-0.08,0.1,2.91,1.06,0,">1 nonsynonymous","L38F T201Q",2
"lib1","SARS-CoV-2","TGAAACGGACATCACA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","F12I C49* V115K T201Y",4
"lib1","SARS-CoV-2","TGAAACGGTATACACA",1,5.37,10.43,-0.34,0.25,2.93,1,0.01,">1 nonsynonymous","S29L T140N",2
"lib1","SARS-CoV-2","TGAAACGTAGACTGGA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L N92I S129R V180I",4
"lib1","SARS-CoV-2","TGAAACGTAGTCATGT",8,84.52,8.12,-2.65,0.19,1.5,1.09,0.01,">1 nonsynonymous","N58T T85S N107L",3
"lib1","SARS-CoV-2","TGAAACGTATGACAAA",1,68.42,10.67,-0.1,0.07,2.93,1.05,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","TGAAACGTTCAACACC",1,1.4,NA,NA,NA,NA,NA,NA,"stop","P82A K87E N107*",3
"lib1","SARS-CoV-2","TGAAACGTTTGCAGTT",6,143.88,10.56,-0.2,0.04,2.83,1.05,0,"1 nonsynonymous","D59L",1
"lib1","SARS-CoV-2","TGAAACTAAACTACAT",2,9.12,6.67,-4.1,0.49,1.5,1.02,0.03,">1 nonsynonymous","A14I A81N G86F G155C C195D",5
"lib1","SARS-CoV-2","TGAAACTAACAGGCCT",2,57.78,9.6,-1.16,0.08,2.72,1.07,0,">1 nonsynonymous","T55A Y121P",2
"lib1","SARS-CoV-2","TGAAACTACGTTGTCA",2,12.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S69C D90E A105Q K198V",4
"lib1","SARS-CoV-2","TGAAACTAGAGGGCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41D D59* T85S L125K V173A",5
"lib1","SARS-CoV-2","TGAAACTATGTAGATG",3,45.79,10.13,-0.63,0.06,2.91,1.04,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","TGAAACTCGCTTCCCA",2,106.21,10.21,-0.56,0.05,2.89,1.04,0,">1 nonsynonymous","S129R G155D",2
"lib1","SARS-CoV-2","TGAAACTCGGATGACC",1,3.76,NA,NA,NA,NA,NA,NA,"stop","K87R Y91L D98S Y119*",4
"lib1","SARS-CoV-2","TGAAACTGCACAACAG",2,18.34,10.44,-0.33,0.03,2.95,1.03,0,">1 nonsynonymous","I2C G9C",2
"lib1","SARS-CoV-2","TGAAACTGGTTAATCC",13,72.03,7.37,-3.39,0.21,1.51,1.17,0.01,">1 nonsynonymous","W23L D34Q T201N",3
"lib1","SARS-CoV-2","TGAAACTTAATTTACA",3,8.91,10.6,-0.16,0.22,2.83,1,0.01,">1 nonsynonymous","R16M L95V K114Q I138M",4
"lib1","SARS-CoV-2","TGAAACTTACCAAGCG",2,23.06,10.79,0.02,0.07,2.93,1.06,0,"1 nonsynonymous","T55S",1
"lib1","SARS-CoV-2","TGAAACTTCCATCGCG",1,33.22,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V11S L38P G51N Q84S D90S D98G",6
"lib1","SARS-CoV-2","TGAAACTTGATTAAGC",10,53.78,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G9Q N30R A105L",3
"lib1","SARS-CoV-2","TGAAACTTGTGACATA",2,8.32,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","F47I P82D D137V T201R",4
"lib1","SARS-CoV-2","TGAAAGAAAAGACTAA",12,87.67,6.39,-4.37,0.48,1.5,1.14,0.02,">1 nonsynonymous","G9T R16T L60R R73T I138F G166C A192L",7
"lib1","SARS-CoV-2","TGAAAGAAATAACAAA",7,126.91,10.52,-0.25,0.04,2.93,1.03,0,">1 nonsynonymous","K56L T85A",2
"lib1","SARS-CoV-2","TGAAAGAACATTGAAA",8,120.57,6,-4.76,0.94,1.5,1.22,0.01,">1 nonsynonymous","I28W N58K N64S K87N K94T V173F",6
"lib1","SARS-CoV-2","TGAAAGAACCGCCTCT",1,11.06,10.82,0.06,0.08,2.9,1.07,0,">1 nonsynonymous","D97F T201I",2
"lib1","SARS-CoV-2","TGAAAGAACGATGTCA",2,46.61,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","A42F Q144I C150M G155V",4
"lib1","SARS-CoV-2","TGAAAGAAGAGGATGG",2,47.97,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V52T N58H D97R G172N",4
"lib1","SARS-CoV-2","TGAAAGAAGCCACATA",5,48.05,7.5,-3.26,0.38,1.5,1.11,0.05,">1 nonsynonymous","C49M L57E",2
"lib1","SARS-CoV-2","TGAAAGAATTAAAAGC",1,92.79,10.85,0.09,0.06,2.86,1.08,0,"1 nonsynonymous","Y178H",1
"lib1","SARS-CoV-2","TGAAAGAATTCCAAAA",2,2.14,NA,NA,NA,NA,NA,NA,"stop","D137S L162*",2
"lib1","SARS-CoV-2","TGAAAGACCAGCTCAA",6,63.55,8.65,-2.11,0.21,1.73,1.14,0.02,">1 nonsynonymous","N58A D98N D137T",3
"lib1","SARS-CoV-2","TGAAAGACGACAATAA",1,42.46,10.07,-0.7,0.05,2.94,1,0,"1 nonsynonymous","F156Q",1
"lib1","SARS-CoV-2","TGAAAGACTCATAGAT",2,7.33,11.09,0.32,0.15,2.94,1,0.01,"1 nonsynonymous","T55Y",1
"lib1","SARS-CoV-2","TGAAAGAGAGATGGCC",2,7.92,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","F17G R25C T85H L95M K199T",5
"lib1","SARS-CoV-2","TGAAAGAGCAAAACCA",3,61.47,6.61,-4.16,0.5,1.5,1.17,0.03,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","TGAAAGATATTATATA",1,22.94,8.25,-2.52,0.29,1.5,1.11,0.03,">1 nonsynonymous","P7K N24K C61S V115Y S139W",5
"lib1","SARS-CoV-2","TGAAAGATCCCATCTT",8,88.27,10.71,-0.06,0.04,2.88,1.05,0,"1 nonsynonymous","L131V",1
"lib1","SARS-CoV-2","TGAAAGCAGATAATCT",1,9.26,6,-4.76,2,1.5,1.21,0.06,"1 nonsynonymous","Y178P",1
"lib1","SARS-CoV-2","TGAAAGCGAAATAGTA",1,22.29,10.61,-0.15,0.04,2.93,1.05,0,"1 nonsynonymous","L60S",1
"lib1","SARS-CoV-2","TGAAAGCGAATCCACA",1,27.65,10.66,-0.11,0.08,2.99,1,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","TGAAAGCTACTCTTGC",21,374.8,10.78,0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAAGCTTGAACAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4P V11W A33S K87* D98L",5
"lib1","SARS-CoV-2","TGAAAGGCTAAATGAA",3,7.22,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","TGAAAGGCTAGACAGG",2,7.45,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","R25P S45I T63Q P82G N92M G146W V173C",7
"lib1","SARS-CoV-2","TGAAAGGTGTTGGTAT",11,31.52,6.18,-4.58,1.01,1.5,1.3,0.04,">1 nonsynonymous","S19N K87S N107S E135I E141I G152T",6
"lib1","SARS-CoV-2","TGAAAGGTTCAAAATG",4,29.5,10.55,-0.21,0.08,2.89,1.07,0,">1 nonsynonymous","R27E A42W",2
"lib1","SARS-CoV-2","TGAAAGTAATTACAGG",1,53.55,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","V37A T55I Q84V P133Y C150V",5
"lib1","SARS-CoV-2","TGAAAGTACCGTTCAG",2,7.97,6,-4.76,2,1.5,1.22,0.06,">1 nonsynonymous","C6Y K48S A89H E135S T148I",5
"lib1","SARS-CoV-2","TGAAAGTAGGTATGTG",5,64.66,7.5,-3.26,0.18,1.5,1.13,0.01,">1 nonsynonymous","V37E G86T D97V F156H T201V",5
"lib1","SARS-CoV-2","TGAAAGTATCGCACCC",7,174.85,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I88T Q176D",2
"lib1","SARS-CoV-2","TGAAAGTCATCACTAG",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L S69P",2
"lib1","SARS-CoV-2","TGAAAGTGCAATGGAA",6,65.75,6.27,-4.49,0.58,1.5,1.24,0.02,"1 nonsynonymous","I80A",1
"lib1","SARS-CoV-2","TGAAAGTTAAAACATC",1,25.67,10.71,-0.05,0.07,2.88,1.06,0,">1 nonsynonymous","L5H E141N Q163S",3
"lib1","SARS-CoV-2","TGAAAGTTTACCGAAA",9,66.25,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","L60T T85S L95F K132Y Y175P",5
"lib1","SARS-CoV-2","TGAAAGTTTTAGCCTA",1,11.77,10.75,-0.01,0.22,2.74,1.26,0.03,"1 nonsynonymous","Q163V",1
"lib1","SARS-CoV-2","TGAAATAAACCCACAA",3,24.63,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F99S A192T",2
"lib1","SARS-CoV-2","TGAAATAAATATTTTG",3,0.5,NA,NA,NA,NA,NA,NA,"stop","S41R D90R L131H V153*",4
"lib1","SARS-CoV-2","TGAAATAACATGGATA",5,62.85,10.54,-0.23,0.04,2.94,1.01,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","TGAAATAACCAGGTTG",6,87.95,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A67F N107G S139P G172E H189I",5
"lib1","SARS-CoV-2","TGAAATAACCCAAACA",5,96.55,6,-4.76,1.05,1.5,1.16,0.01,">1 nonsynonymous","V77K P177S",2
"lib1","SARS-CoV-2","TGAAATAACCGGTAGC",4,82.62,9.87,-0.89,0.11,2.48,1.05,0.01,">1 nonsynonymous","A105V F160P",2
"lib1","SARS-CoV-2","TGAAATAACTGGAGAC",3,28.68,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D98L G146I N151K Y175V",4
"lib1","SARS-CoV-2","TGAAATAACTGTTAGT",9,163.96,10.27,-0.5,0.03,2.79,1.05,0,">1 nonsynonymous","A33L P149G S164V",3
"lib1","SARS-CoV-2","TGAAATAATATATAAA",4,21.28,9.13,-1.63,0.25,2.05,1.31,0.04,"1 nonsynonymous","R73I",1
"lib1","SARS-CoV-2","TGAAATAATCAAACAA",3,22.57,10.32,-0.44,0.2,2.6,1.04,0.01,">1 nonsynonymous","L60Q A81G",2
"lib1","SARS-CoV-2","TGAAATAATCCCACGC",9,233.29,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y159S P161S Y178C",3
"lib1","SARS-CoV-2","TGAAATACCATTCTCC",4,12.86,9.39,-1.37,0.16,2.01,1.1,0.02,">1 nonsynonymous","N1S V11A A22K",3
"lib1","SARS-CoV-2","TGAAATACCCAAAAAC",2,15.7,6,-4.76,2,1.5,1.12,0.08,">1 nonsynonymous","K48D K94V G117A",3
"lib1","SARS-CoV-2","TGAAATACCGGGATTA",4,72.01,10.19,-0.58,0.08,2.78,1.03,0,">1 nonsynonymous","N64K S129L",2
"lib1","SARS-CoV-2","TGAAATAGACTTTGTA",1,28.77,9.5,-1.26,0.16,1.67,1.13,0.01,">1 nonsynonymous","A14Y S129L",2
"lib1","SARS-CoV-2","TGAAATAGGTGAAATG",1,1.8,NA,NA,NA,NA,NA,NA,"stop","Q84V K198* T201L",3
"lib1","SARS-CoV-2","TGAAATAGTAATACAT",4,8.15,6.72,-4.04,0.39,1.5,1.16,0.04,">1 nonsynonymous","R25Y A190L",2
"lib1","SARS-CoV-2","TGAAATAGTATATATA",4,57.45,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F99G S164L",2
"lib1","SARS-CoV-2","TGAAATATGAATTCAG",2,16.6,7.72,-3.04,0.32,1.5,1,0.05,">1 nonsynonymous","L5I K94E D137Y",3
"lib1","SARS-CoV-2","TGAAATATTAATCAGA",4,57.5,10.1,-0.66,0.1,2.52,1.03,0,"1 nonsynonymous","A81I",1
"lib1","SARS-CoV-2","TGAAATCACGACATAC",3,55.9,10.49,-0.27,0.05,2.85,1.07,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","TGAAATCCAAAACAGA",6,109.86,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3L T55Q N107R F167L Y178T",5
"lib1","SARS-CoV-2","TGAAATCCGTAGGGCA",1,15.97,9.9,-0.87,0.1,2.42,1.06,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","TGAAATCGAATCATAT",3,80.55,10.8,0.04,0.05,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAATCTAAACTTAA",6,55.37,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S41P W106P",2
"lib1","SARS-CoV-2","TGAAATCTCGATTATG",2,25.48,8.22,-2.55,0.17,1.58,1.21,0.01,">1 nonsynonymous","A89G Y93F",2
"lib1","SARS-CoV-2","TGAAATCTCTCCCCCC",6,6.08,NA,NA,NA,NA,NA,NA,"stop","N4S P82R I138*",3
"lib1","SARS-CoV-2","TGAAATCTGTAGCCTA",1,9.33,6.28,-4.48,0.8,1.5,1.13,0.03,">1 nonsynonymous","W106A F167I",2
"lib1","SARS-CoV-2","TGAAATCTTAAAATTT",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R I80T D90R G166Y",4
"lib1","SARS-CoV-2","TGAAATGAAAACGCCA",1,0.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","TGAAATGAAGGGAGAT",1,36.15,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A22L G86L N157A N171T",4
"lib1","SARS-CoV-2","TGAAATGAATAATTGG",2,13.3,10.25,-0.51,0.26,2.83,1.16,0.02,"synonymous","",0
"lib1","SARS-CoV-2","TGAAATGACATACGTT",3,1.86,NA,NA,NA,NA,NA,NA,"stop","K87W F99V C102L K114* V153M",5
"lib1","SARS-CoV-2","TGAAATGACCAATTGG",2,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S S19N",2
"lib1","SARS-CoV-2","TGAAATGCACAAAGTT",2,18.99,9.68,-1.09,0.07,2.89,1.07,0,">1 nonsynonymous","Y91H F156R",2
"lib1","SARS-CoV-2","TGAAATGCATCATCCG",9,115.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R K94E K114S",3
"lib1","SARS-CoV-2","TGAAATGCATTAATTT",3,15.47,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","P161I P169F",2
"lib1","SARS-CoV-2","TGAAATGGCAAACCAG",4,44.42,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N4V V52N D137L N151D",4
"lib1","SARS-CoV-2","TGAAATGGTACTAGCG",2,41.1,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","L95E N120D C150I F167P Y178P",5
"lib1","SARS-CoV-2","TGAAATGTAACCTTTA",3,19.35,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A14F Y93K",2
"lib1","SARS-CoV-2","TGAAATGTATTAATGC",1,43.52,10.74,-0.03,0.06,2.85,1.1,0,"1 nonsynonymous","N110T",1
"lib1","SARS-CoV-2","TGAAATTAAAGACAGC",2,22.58,6.35,-4.41,0.81,1.5,1.16,0.08,">1 nonsynonymous","S43R T85K Y93N T100Y N107S R124C",6
"lib1","SARS-CoV-2","TGAAATTAAATTACAT",7,142.23,10.78,0.01,0.06,2.91,1.06,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","TGAAATTACCACCAGT",4,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H Y91V G196I",3
"lib1","SARS-CoV-2","TGAAATTAGATTCATA",2,42.44,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N40F F47G V77P D90R",4
"lib1","SARS-CoV-2","TGAAATTAGTCAATAA",5,30.46,7.91,-2.85,0.29,1.5,1.04,0.03,"1 nonsynonymous","N107W",1
"lib1","SARS-CoV-2","TGAAATTCAAGATAAA",1,34.82,9.17,-1.6,0.13,2.69,1.13,0.01,">1 nonsynonymous","S41T K48S T140N G166V",4
"lib1","SARS-CoV-2","TGAAATTCCCGGCGAT",2,7.27,10.89,0.13,0.12,2.87,1.02,0.01,"1 nonsynonymous","Y39M",1
"lib1","SARS-CoV-2","TGAAATTCCGAACTCC",5,20.9,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S69V N130L F160G Q168C",4
"lib1","SARS-CoV-2","TGAAATTCTAACCATA",2,21.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C102V L122I P169F",3
"lib1","SARS-CoV-2","TGAAATTGACTTTTAC",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N C61N N120A S147P G166A",5
"lib1","SARS-CoV-2","TGAAATTTAAACGATA",18,227.14,10.34,-0.42,0.05,2.79,1.03,0,">1 nonsynonymous","A14T N120G",2
"lib1","SARS-CoV-2","TGAAATTTAATGTGCA",3,25.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88M D98E F160D",3
"lib1","SARS-CoV-2","TGAAATTTGAACATAC",5,31.99,6.33,-4.44,0.48,1.5,1.2,0.01,">1 nonsynonymous","D68E L131Q I138L R179I",4
"lib1","SARS-CoV-2","TGAAATTTGATAGAAA",2,51.45,10.21,-0.55,0.08,2.73,1,0,">1 nonsynonymous","Y35R A42E",2
"lib1","SARS-CoV-2","TGAAATTTGTTTGTTT",2,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F V103E Q144Y",3
"lib1","SARS-CoV-2","TGAAATTTTTGACAAA",4,65.41,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I2L C6F V37E C49T L162W",5
"lib1","SARS-CoV-2","TGAACAAAAATCCGTG",2,79.62,9.35,-1.41,0.17,1.98,1.11,0.01,">1 nonsynonymous","F44R Q176M",2
"lib1","SARS-CoV-2","TGAACAAAAGTAAACA",8,82.31,9.21,-1.56,0.06,2.97,1.06,0,">1 nonsynonymous","G116A G166H",2
"lib1","SARS-CoV-2","TGAACAAACCTGATTT",6,39.72,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F44S G51L N92R S139I",4
"lib1","SARS-CoV-2","TGAACAAACTAGGTTC",2,24.98,8.76,-2,0.32,1.5,1.13,0.05,">1 nonsynonymous","C6T A14V F44L T55C",4
"lib1","SARS-CoV-2","TGAACAAAGGATCACA",1,35.08,8.29,-2.48,0.14,2.9,1.06,0.01,">1 nonsynonymous","D90N F126S",2
"lib1","SARS-CoV-2","TGAACAAATAAAACTA",1,13.76,10.29,-0.48,0.13,2.87,1,0.01,">1 nonsynonymous","K48H L95M",2
"lib1","SARS-CoV-2","TGAACAAATACCAAAA",1,6.61,10.23,-0.53,0.27,2.21,1,0.02,">1 nonsynonymous","S45L T100N N110K",3
"lib1","SARS-CoV-2","TGAACAAATCCAACGC",3,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103Y E141G",2
"lib1","SARS-CoV-2","TGAACAACATAAACCG",2,22.17,10.73,-0.04,0.1,2.82,1.18,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGAACAACCGGCATTC",3,142.47,7.72,-3.04,0.14,2.01,1.2,0.01,">1 nonsynonymous","R78V C158S K198H",3
"lib1","SARS-CoV-2","TGAACAACGAAAGCCT",6,92.96,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S36A I88F W106F S113N T140W C150Y",6
"lib1","SARS-CoV-2","TGAACAACGATAATCA",9,134.73,10.7,-0.06,0.04,2.88,1.05,0,"1 nonsynonymous","P7A",1
"lib1","SARS-CoV-2","TGAACAACTTTGTAGT",5,57.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N V77S Y91F A105T N118S",5
"lib1","SARS-CoV-2","TGAACAAGCGCATGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S43E K56* G86K P161R",4
"lib1","SARS-CoV-2","TGAACAAGCTAACTAA",1,6.9,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","E76T S113T N120P P133A P149R",5
"lib1","SARS-CoV-2","TGAACAAGTCCCATCA",6,90.19,9.31,-1.46,0.1,1.94,1.13,0.01,">1 nonsynonymous","N13F K128V P169S",3
"lib1","SARS-CoV-2","TGAACAATATGTTCTA",9,179.93,8.93,-1.83,0.06,2.84,1.09,0,">1 nonsynonymous","R27I K87R G117F",3
"lib1","SARS-CoV-2","TGAACAATATTTGGAT",1,8.08,9.09,-1.67,0.12,2.87,1.08,0.01,">1 nonsynonymous","R78V Q144G T170F",3
"lib1","SARS-CoV-2","TGAACAATCAGGCATA",5,104.11,7.02,-3.74,0.35,1.5,1.14,0.03,">1 nonsynonymous","R16V D90V Y175M",3
"lib1","SARS-CoV-2","TGAACAATTGATTTCA",6,36.01,10.59,-0.17,0.04,2.92,1,0,">1 nonsynonymous","L60F G116P",2
"lib1","SARS-CoV-2","TGAACACAAATCGCAC",4,97.79,10.3,-0.47,0.04,2.77,1.02,0,"1 nonsynonymous","P96T",1
"lib1","SARS-CoV-2","TGAACACATCGCCAGG",4,103.94,10.23,-0.54,0.05,2.8,1.01,0,">1 nonsynonymous","A18W A42L",2
"lib1","SARS-CoV-2","TGAACACATGCCAACA",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y K87E F99P G146T",4
"lib1","SARS-CoV-2","TGAACACCAATCAATT",1,33.63,10.94,0.18,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACACCGAGATCTA",4,13.83,10.82,0.06,0.06,2.85,1.1,0,">1 nonsynonymous","K56S L60I",2
"lib1","SARS-CoV-2","TGAACACCTATGTAAG",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W C102S S113I",3
"lib1","SARS-CoV-2","TGAACACGGTGCGGAG",2,51.29,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","D68V C102V",2
"lib1","SARS-CoV-2","TGAACACTAGAAAATA",1,44.66,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44L Y50S Y119G P177H",4
"lib1","SARS-CoV-2","TGAACACTTAAAAACT",3,67.41,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","V52H N64T Y91S A105D",4
"lib1","SARS-CoV-2","TGAACAGAATCAGGTC",6,148.77,10.71,-0.05,0.07,2.86,1.1,0,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","TGAACAGACCCCATAT",2,31.13,10.67,-0.1,0.05,2.93,1,0,">1 nonsynonymous","T55S K128I",2
"lib1","SARS-CoV-2","TGAACAGACTGATAAA",8,72.57,6.74,-4.02,0.37,1.5,1.17,0.02,">1 nonsynonymous","F12L D98L F134C",3
"lib1","SARS-CoV-2","TGAACAGATGAACTGT",1,8.84,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S108K L131R N157F G174W",4
"lib1","SARS-CoV-2","TGAACAGTAAACCGGC",4,0,NA,NA,NA,NA,NA,NA,"stop","L38E E76D K94* V180W",4
"lib1","SARS-CoV-2","TGAACAGTAGTTTATG",6,7.93,NA,NA,NA,NA,NA,NA,"stop","Y119* K128V L188V",3
"lib1","SARS-CoV-2","TGAACAGTATATAAGA",1,78.56,10.54,-0.23,0.04,2.87,1.05,0,">1 nonsynonymous","T3E E141L",2
"lib1","SARS-CoV-2","TGAACATAAAAGCATA",4,73.55,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I104L Y121C C158L",3
"lib1","SARS-CoV-2","TGAACATAGAATCAAA",3,2.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81Y",1
"lib1","SARS-CoV-2","TGAACATAGGAAATAA",2,65.72,9.03,-1.73,0.07,2.87,1.09,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","TGAACATATGCGATAT",1,56.4,10.79,0.02,0.11,2.86,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACATCAAATGAGT",3,10.33,6,-4.76,2,1.5,1.12,0.07,">1 nonsynonymous","S41W Y121E T170Y",3
"lib1","SARS-CoV-2","TGAACATCATGTTATA",6,0.94,NA,NA,NA,NA,NA,NA,"stop","F44S L60* P161R",3
"lib1","SARS-CoV-2","TGAACATCCAAATACT",5,1.15,NA,NA,NA,NA,NA,NA,"stop","S29R G51* L95G K132S Q168C",5
"lib1","SARS-CoV-2","TGAACATCCAACAGTA",8,66.48,9.57,-1.19,0.11,1.82,1.09,0.01,">1 nonsynonymous","V77I P133T P149M",3
"lib1","SARS-CoV-2","TGAACATCTTAGATGC",1,18.58,8.35,-2.41,0.18,2.16,1.12,0.01,">1 nonsynonymous","L5A G83V A145D",3
"lib1","SARS-CoV-2","TGAACATGAACTCCGA",4,131.32,10.36,-0.4,0.05,2.92,1.01,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","TGAACATGCAATTGAT",2,17.67,9.73,-1.03,0.25,2.42,1.03,0.01,">1 nonsynonymous","D98L G152K F160C",3
"lib1","SARS-CoV-2","TGAACATGCCTGATCA",2,87.27,10.2,-0.57,0.04,2.95,1,0,">1 nonsynonymous","L122M F160C G166A",3
"lib1","SARS-CoV-2","TGAACATGTCAACAAC",3,18.76,10.62,-0.14,0.08,2.99,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACATGTCCTCCAT",9,104.04,7.92,-2.84,0.22,1.5,1.16,0.01,">1 nonsynonymous","N1K F126P",2
"lib1","SARS-CoV-2","TGAACATGTTATACGG",1,14.17,8.79,-1.98,0.24,1.5,1.42,0.03,">1 nonsynonymous","A14W N30M",2
"lib1","SARS-CoV-2","TGAACATTCGTTGGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26N N64*",2
"lib1","SARS-CoV-2","TGAACCAAACATGCTA",10,1.43,NA,NA,NA,NA,NA,NA,"stop","Y66* K132W E154I",3
"lib1","SARS-CoV-2","TGAACCAAAGCATCCT",4,81.1,8.65,-2.12,0.13,2.27,1.11,0.01,">1 nonsynonymous","N4I D97M I138T Y175S",4
"lib1","SARS-CoV-2","TGAACCAAAGCTGGGG",8,48.59,6,-4.76,1.88,3,1.15,0.01,">1 nonsynonymous","S19T S41P C61S Y91W W106L",5
"lib1","SARS-CoV-2","TGAACCAACATGTAGG",12,195.4,10.78,0.02,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACCACAAATTCAC",1,12.82,10.73,-0.03,0.08,3,1.03,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","TGAACCACCGCCTGAC",1,7.06,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F44E K56I V103G Q168G P197L",5
"lib1","SARS-CoV-2","TGAACCACGTTCAACC",2,26.85,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F12C F62S D68K G83S Y91T",5
"lib1","SARS-CoV-2","TGAACCATGTTTACAG",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D C61S P82Y P96T",4
"lib1","SARS-CoV-2","TGAACCCGCAGACCGA",3,7.74,6,-4.76,2,3,1.25,0.04,">1 nonsynonymous","G74V R78N K94G E135Q G152Y",5
"lib1","SARS-CoV-2","TGAACCCGGAGCTGTG",1,14.56,6,-4.76,2,3,1.11,0,">1 nonsynonymous","P82R D112A I138S",3
"lib1","SARS-CoV-2","TGAACCCGTAAAGTCA",5,57.77,8.7,-2.06,0.1,2.9,1.07,0,">1 nonsynonymous","F134H N157E",2
"lib1","SARS-CoV-2","TGAACCCGTAGATATA",5,67.69,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37L Y66D W106C K128D",4
"lib1","SARS-CoV-2","TGAACCCTGACCCCAC",5,33.75,10.46,-0.3,0.06,2.87,1.01,0,">1 nonsynonymous","D90K E186G",2
"lib1","SARS-CoV-2","TGAACCCTTCTGGTGG",2,0,NA,NA,NA,NA,NA,NA,"stop","L38G Y93A N110G S129*",4
"lib1","SARS-CoV-2","TGAACCGAATCATACT",4,17.71,6,-4.76,1.34,3,1.21,0.01,">1 nonsynonymous","F70L A145F G155V",3
"lib1","SARS-CoV-2","TGAACCGAATTAACGT",4,5.82,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I28S C31Y G174F",3
"lib1","SARS-CoV-2","TGAACCGATTAACATA",2,6.57,6,-4.76,2,3,1.06,0,">1 nonsynonymous","K48F L122D T140P G166A",4
"lib1","SARS-CoV-2","TGAACCGCATCTCCTG",1,11.8,6.16,-4.61,2,1.5,1.13,0.02,">1 nonsynonymous","W23V N120P S129I F134L",4
"lib1","SARS-CoV-2","TGAACCGGGGAAATTG",1,6.94,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I28T C61M Y91E L122W",4
"lib1","SARS-CoV-2","TGAACCGTCCATCGAG",2,50.59,10.62,-0.14,0.05,2.97,1,0,"1 nonsynonymous","N109C",1
"lib1","SARS-CoV-2","TGAACCGTGTAAAATA",5,37.64,10.68,-0.09,0.04,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACCGTTTTAACCA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S L38R P82Q Y123L L131W T148N L183H",7
"lib1","SARS-CoV-2","TGAACCTAAATGGATA",2,1.44,NA,NA,NA,NA,NA,NA,"stop","I88A P96* S113G N120G E141L L183K",6
"lib1","SARS-CoV-2","TGAACCTAATAAATCG",8,0.55,NA,NA,NA,NA,NA,NA,"stop","W23G Y35* D98K E135K",4
"lib1","SARS-CoV-2","TGAACCTAATCTATAA",4,44.88,10.81,0.04,0.09,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAACCTACATATATA",3,52.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","Y93S L122R",2
"lib1","SARS-CoV-2","TGAACCTAGTACATTA",5,26.52,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","C61L F99Y V103T",3
"lib1","SARS-CoV-2","TGAACCTGAGCATAAC",5,43.46,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N92R T100L L162M K198L",4
"lib1","SARS-CoV-2","TGAACCTGCGCCGGAA",5,57.9,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A22H F99S",2
"lib1","SARS-CoV-2","TGAACCTGGTCGTTTT",6,59.33,10.23,-0.53,0.05,2.92,1.02,0,">1 nonsynonymous","F8I V37L A145M V153R",4
"lib1","SARS-CoV-2","TGAACCTTATTACAAT",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66K S139R",2
"lib1","SARS-CoV-2","TGAACGAACATGGACA",2,36.45,10.38,-0.38,0.06,2.92,1.05,0,">1 nonsynonymous","C61V Y121L",2
"lib1","SARS-CoV-2","TGAACGAAGTTATTAA",1,37.66,9.15,-1.62,0.19,1.51,1.12,0.02,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","TGAACGAATTGAACAC",3,121.7,9.54,-1.23,0.07,2.7,1.08,0,">1 nonsynonymous","R25Q T63K L125A F134L",4
"lib1","SARS-CoV-2","TGAACGACATATCAAC",1,25.96,10.3,-0.47,0.07,2.97,1,0,"1 nonsynonymous","C102I",1
"lib1","SARS-CoV-2","TGAACGACCCACATAT",7,65.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K48F P96M S113R Y121F",4
"lib1","SARS-CoV-2","TGAACGACCTGCAGCT",12,63.6,8.46,-2.3,0.28,1.5,1.04,0.03,">1 nonsynonymous","S53L Y178D S200R",3
"lib1","SARS-CoV-2","TGAACGAGTTGTTGAG",2,15.81,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C6L F12A G146L",3
"lib1","SARS-CoV-2","TGAACGATATAGGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N13S F62V Q168R",4
"lib1","SARS-CoV-2","TGAACGATGATAACAC",10,88.78,10.22,-0.54,0.09,2.58,1,0,">1 nonsynonymous","T100R I104V P133R P197V",4
"lib1","SARS-CoV-2","TGAACGATTTAACAAA",7,29.1,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S41V D98H N107F N130V",4
"lib1","SARS-CoV-2","TGAACGCATCTGTAAG",11,250.03,10.92,0.15,0.07,2.92,1.04,0,">1 nonsynonymous","I2T Q163A",2
"lib1","SARS-CoV-2","TGAACGCATTACGTAA",3,25.04,7.89,-2.87,0.45,1.5,1.04,0.06,">1 nonsynonymous","N13F S139V A190C",3
"lib1","SARS-CoV-2","TGAACGCGCGTATAAT",5,2.06,NA,NA,NA,NA,NA,NA,"stop","D97Q I104R D112A Y143W Y175I S200*",6
"lib1","SARS-CoV-2","TGAACGCGGAATTTGC",2,24.74,6.08,-4.68,1.46,1.5,1.31,0.07,">1 nonsynonymous","D75L Y93E P133S",3
"lib1","SARS-CoV-2","TGAACGGAAACACAAT",2,25.41,6.58,-4.19,0.34,1.5,1.08,0.02,">1 nonsynonymous","I88K R124E E141D H189L",4
"lib1","SARS-CoV-2","TGAACGGATACAAAGG",3,55.05,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V103F",1
"lib1","SARS-CoV-2","TGAACGGCGATCTCGC",5,90.76,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K48I V65R P96V V103F",4
"lib1","SARS-CoV-2","TGAACGGGAATTTAAG",3,39.05,7.52,-3.25,0.36,1.5,1.2,0.03,"1 nonsynonymous","T100P",1
"lib1","SARS-CoV-2","TGAACGTAAAAAAACA",1,53.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30W F185S",2
"lib1","SARS-CoV-2","TGAACGTAAATCATTG",4,129.78,9.96,-0.81,0.09,2.43,1.02,0,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","TGAACGTAATAACAAT",6,43.02,9.71,-1.05,0.09,2.83,1,0,">1 nonsynonymous","G74R Q84S S164K",3
"lib1","SARS-CoV-2","TGAACGTATCTGGGCT",1,10.02,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K48D R73W S113K G155S",4
"lib1","SARS-CoV-2","TGAACTAACTTCAATA",6,0.6,NA,NA,NA,NA,NA,NA,"stop","S43Q K56L W106M Y121P P149* K199H",6
"lib1","SARS-CoV-2","TGAACTAAGGCACTCG",4,38.41,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93D Y119K",2
"lib1","SARS-CoV-2","TGAACTACAAAATATC",9,193.75,10.76,0,0.07,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACTACCCTACGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","D59E W106* R136V P161N K198R",5
"lib1","SARS-CoV-2","TGAACTACGAGAAGGA",1,16.77,10.13,-0.64,0.21,2.28,1,0.02,">1 nonsynonymous","A33T Y91K",2
"lib1","SARS-CoV-2","TGAACTAGTCCACTTA",6,119.42,10.66,-0.11,0.04,2.92,1.04,0,">1 nonsynonymous","N4G C61R",2
"lib1","SARS-CoV-2","TGAACTAGTCGCTCAA",4,108.22,8.33,-2.43,0.15,2.17,1.14,0.01,">1 nonsynonymous","C61W S113M",2
"lib1","SARS-CoV-2","TGAACTATATATGGAA",2,15.61,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W23Q A81I R127M",3
"lib1","SARS-CoV-2","TGAACTATTAAAGAAT",4,34.14,9.98,-0.78,0.1,1.96,1.16,0,">1 nonsynonymous","N4I F62E",2
"lib1","SARS-CoV-2","TGAACTATTAAGCGAA",3,44.91,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","N40C R127E S139D",3
"lib1","SARS-CoV-2","TGAACTCAAAAGCATG",12,267.45,10.72,-0.04,0.06,2.85,1.07,0,">1 nonsynonymous","I2T T55Y",2
"lib1","SARS-CoV-2","TGAACTCACAAAACGT",3,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N V71K K94N",3
"lib1","SARS-CoV-2","TGAACTCAGCCACTTT",3,73.17,8.56,-2.21,0.1,2.31,1.08,0,">1 nonsynonymous","Y50F G83E Y143V",3
"lib1","SARS-CoV-2","TGAACTCATCGATTAG",2,23.94,10.1,-0.66,0.07,2.84,1,0,"1 nonsynonymous","G155Y",1
"lib1","SARS-CoV-2","TGAACTCCACACCATA",1,46.41,6,-4.76,1.43,3,1.2,0.01,">1 nonsynonymous","V11D Y35F S139L F167L",4
"lib1","SARS-CoV-2","TGAACTCGAAGAGATG",4,30.47,7.16,-3.61,0.39,1.5,1.08,0.05,">1 nonsynonymous","N24K G51P L60E G86N",4
"lib1","SARS-CoV-2","TGAACTCTAATCACGA",5,1.18,NA,NA,NA,NA,NA,NA,"stop","F44Y K56* D68I G83K L122T G152A",6
"lib1","SARS-CoV-2","TGAACTCTACACGTAG",4,81.84,6,-4.76,1.39,1.5,1.2,0.02,">1 nonsynonymous","V65S N120L R127F A145K",4
"lib1","SARS-CoV-2","TGAACTCTCAAGAGTA",7,21.93,7.87,-2.9,0.46,1.5,1,0.06,">1 nonsynonymous","A22T G51C K87L S139H",4
"lib1","SARS-CoV-2","TGAACTGACTAAGCAA",7,46.75,6.37,-4.4,0.77,1.5,1.15,0.04,">1 nonsynonymous","G86Q L131I S139I G155F",4
"lib1","SARS-CoV-2","TGAACTGCCATCGACC",2,10.66,6.96,-3.81,0.57,1.5,1.19,0.04,">1 nonsynonymous","E10M T15I W106Y Y119D G166S",5
"lib1","SARS-CoV-2","TGAACTGTTCTTTAAA",2,44.91,9.67,-1.09,0.07,2.83,1.07,0,">1 nonsynonymous","K132A P169E",2
"lib1","SARS-CoV-2","TGAACTTAAAATTATA",2,6.79,NA,NA,NA,NA,NA,NA,"stop","T46L Y143* F167I",3
"lib1","SARS-CoV-2","TGAACTTAAATCGAAG",1,5.98,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N40F F99T V180H",3
"lib1","SARS-CoV-2","TGAACTTACCCACTGG",7,51.64,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5F Y93R W106S N118E",4
"lib1","SARS-CoV-2","TGAACTTAGGACATTA",2,92.81,10.73,-0.04,0.08,2.86,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAACTTAGGTCCAAC",4,40.85,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I88N G172A",2
"lib1","SARS-CoV-2","TGAACTTATCTCTCTT",4,6.11,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13R A105Q A190T",3
"lib1","SARS-CoV-2","TGAACTTATGGCGAAA",3,0.21,NA,NA,NA,NA,NA,NA,"stop","Y66* R73L V173L",3
"lib1","SARS-CoV-2","TGAACTTCTATCCCCA",8,1988.57,7.32,-3.44,0.26,1.5,1.1,0.02,">1 nonsynonymous","S45F R124K S200W",3
"lib1","SARS-CoV-2","TGAACTTTTGAACGGG",2,43.29,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N4E N40C C49T L95H L131S",5
"lib1","SARS-CoV-2","TGAACTTTTTACGGAA",4,124.33,9.87,-0.9,0.08,2.56,1.08,0,">1 nonsynonymous","D90H I142Y",2
"lib1","SARS-CoV-2","TGAAGAAAAGATGCGA",1,16.95,6,-4.76,2,1.5,1.4,0.07,">1 nonsynonymous","D90P P177K",2
"lib1","SARS-CoV-2","TGAAGAAACAGGAGTC",2,3.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183H",1
"lib1","SARS-CoV-2","TGAAGAACAATGTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T F44L Y50V P177S",4
"lib1","SARS-CoV-2","TGAAGAACTAGACTAA",10,844.67,10.37,-0.4,0.04,2.89,1.03,0,"1 nonsynonymous","E10I",1
"lib1","SARS-CoV-2","TGAAGAACTTCATCGA",1,9.98,10.81,0.04,0.1,2.83,1.16,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAAGAAGGGGATAAA",3,34.17,8.68,-2.09,0.1,2.99,1.01,0,">1 nonsynonymous","Y66T Y159M",2
"lib1","SARS-CoV-2","TGAAGAATAAAGCGTA",3,22.78,6,-4.76,2,3,1.23,0,">1 nonsynonymous","V11D Y39V E141D C150N",4
"lib1","SARS-CoV-2","TGAAGAATACTAGTGG",9,69.22,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44S Y93N",2
"lib1","SARS-CoV-2","TGAAGAATGAGCAATT",3,74.07,10.78,0.02,0.07,2.91,1.08,0,"1 nonsynonymous","K198N",1
"lib1","SARS-CoV-2","TGAAGACAAAGTGAAA",2,23.62,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","L38H V65I A89M L125T Y178A",5
"lib1","SARS-CoV-2","TGAAGACAACGAATTA",1,45.14,6,-4.76,2,1.5,1.23,0.01,"1 nonsynonymous","F167S",1
"lib1","SARS-CoV-2","TGAAGACATCAAGCCG",7,141.77,10.8,0.04,0.06,2.92,1.03,0,"1 nonsynonymous","Q84T",1
"lib1","SARS-CoV-2","TGAAGACATCTTAGGG",11,124.78,10.57,-0.19,0.04,2.92,1.03,0,"1 nonsynonymous","F134L",1
"lib1","SARS-CoV-2","TGAAGACCAATTTGTG",1,13.1,9.81,-0.96,0.16,1.9,1.3,0.01,"1 nonsynonymous","F8A",1
"lib1","SARS-CoV-2","TGAAGACGTACTTGAG",4,8.03,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F12Q N120T",2
"lib1","SARS-CoV-2","TGAAGAGAGAAAAAGG",2,25.67,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C61W D68R",2
"lib1","SARS-CoV-2","TGAAGAGAGACGGTGT",1,11.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30Y A81F",2
"lib1","SARS-CoV-2","TGAAGAGCCAGCGACA",8,35.76,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A89I A145M G152W",3
"lib1","SARS-CoV-2","TGAAGAGGAAACTAGA",1,16.45,7.95,-2.81,0.47,1.5,1,0.06,">1 nonsynonymous","C61R Y93S",2
"lib1","SARS-CoV-2","TGAAGAGGCTGATAAC",1,10.43,10.57,-0.2,0.06,2.93,1.07,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","TGAAGAGTGAATAAAG",2,26.62,10.78,0.01,0.07,2.92,1.01,0,">1 nonsynonymous","R16W N151K",2
"lib1","SARS-CoV-2","TGAAGATAAACCATTA",11,236.52,9.01,-1.76,0.14,1.76,1.13,0.01,">1 nonsynonymous","C31P L38S",2
"lib1","SARS-CoV-2","TGAAGATAAATTAGGT",10,713.16,6.39,-4.38,0.36,1.5,1.15,0.01,">1 nonsynonymous","F44W N118T Y143G P197L",4
"lib1","SARS-CoV-2","TGAAGATAGTACGGTT",1,21.4,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S29F Q84L N107F",3
"lib1","SARS-CoV-2","TGAAGATGGGAGGTTA",1,39.96,9.83,-0.93,0.1,1.98,1.09,0,">1 nonsynonymous","S69M Q84H",2
"lib1","SARS-CoV-2","TGAAGATTAATAGACG",6,130.99,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R124Y Y143G P177F P191T",4
"lib1","SARS-CoV-2","TGAAGATTCACCAGTC",3,104.1,10.6,-0.17,0.04,2.96,1.03,0,">1 nonsynonymous","K56E G116S",2
"lib1","SARS-CoV-2","TGAAGATTTTCAGTTT",4,9.39,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35S Y123G C150T",3
"lib1","SARS-CoV-2","TGAAGCACCAAATATA",8,65.18,10.19,-0.57,0.09,2.42,1.04,0,">1 nonsynonymous","T3F N24C V173R",3
"lib1","SARS-CoV-2","TGAAGCAGGCTTGCAG",5,0.9,NA,NA,NA,NA,NA,NA,"stop","W106V G116H T201*",3
"lib1","SARS-CoV-2","TGAAGCCAAAAAACCA",17,4.6,NA,NA,NA,NA,NA,NA,"stop","D34R P54V D112*",3
"lib1","SARS-CoV-2","TGAAGCCAAGAAAGCC",3,75.45,10.74,-0.02,0.04,2.92,1,0,">1 nonsynonymous","A67V G83R N110S K128R Q163A",5
"lib1","SARS-CoV-2","TGAAGCCACTAACTAC",11,190.44,9.8,-0.96,0.12,2.09,1.08,0.01,">1 nonsynonymous","A105T I142Y Y178N",3
"lib1","SARS-CoV-2","TGAAGCCCCACAGGGG",4,1.01,NA,NA,NA,NA,NA,NA,"stop","V37* G152A T201M",3
"lib1","SARS-CoV-2","TGAAGCCCGATAACTC",1,18.23,10.74,-0.02,0.11,2.82,1.17,0,">1 nonsynonymous","V37F P149A L188M",3
"lib1","SARS-CoV-2","TGAAGCCCGATCAAAG",2,34.59,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F12A A33G K87S L125Y",4
"lib1","SARS-CoV-2","TGAAGCCGCAATATCA",5,0.4,NA,NA,NA,NA,NA,NA,"stop","R27* S129N",2
"lib1","SARS-CoV-2","TGAAGCCGTAATCTTA",1,1.08,NA,NA,NA,NA,NA,NA,"stop","Y39C L60*",2
"lib1","SARS-CoV-2","TGAAGCGAGCAACTTA",8,9100.45,10.73,-0.04,0.04,2.93,1.04,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","TGAAGCGTAAATGGAG",4,0,NA,NA,NA,NA,NA,NA,"stop","T3* K94*",2
"lib1","SARS-CoV-2","TGAAGCTACCATTAAT",4,50.32,10.16,-0.6,0.1,2.76,1,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","TGAAGCTTAATTCAGG",2,54.39,10.25,-0.52,0.04,2.86,1.04,0,">1 nonsynonymous","S29W E141R T148S",3
"lib1","SARS-CoV-2","TGAAGCTTACCATCCG",1,16.05,10.35,-0.41,0.07,2.81,1.07,0,">1 nonsynonymous","S41M S184R",2
"lib1","SARS-CoV-2","TGAAGCTTTAATAACT",5,36.91,8.55,-2.21,0.39,1.5,1,0.07,">1 nonsynonymous","K48L W106N",2
"lib1","SARS-CoV-2","TGAAGGAAAACGAACA",7,110.43,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","P7I D97V Q176Y",3
"lib1","SARS-CoV-2","TGAAGGAACACATTAA",3,17.03,10.42,-0.34,0.08,2.91,1.02,0,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","TGAAGGAAGCAAGTTG",1,11.69,6.25,-4.51,0.95,1.5,1.07,0.05,">1 nonsynonymous","G117A A145V N171D",3
"lib1","SARS-CoV-2","TGAAGGAAGTTCCCTC",7,1.28,NA,NA,NA,NA,NA,NA,"stop","N1* C61W A81I N120L Q163E",5
"lib1","SARS-CoV-2","TGAAGGATAAAGTAGT",1,53.27,9.77,-1,0.1,2.45,1.05,0,">1 nonsynonymous","Y35G N40H F160I",3
"lib1","SARS-CoV-2","TGAAGGATGTGCGATT",1,30.89,10.16,-0.6,0.09,2.83,1.07,0,">1 nonsynonymous","A14C V77L",2
"lib1","SARS-CoV-2","TGAAGGATTATGGGAT",2,46.45,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N120R C150A Y165V",3
"lib1","SARS-CoV-2","TGAAGGATTGTACCAC",1,13.61,9.78,-0.99,0.07,2.69,1.05,0,"1 nonsynonymous","Q144F",1
"lib1","SARS-CoV-2","TGAAGGCAACGGTTAT",1,56.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I S36L I72F G86M K94T P133D",6
"lib1","SARS-CoV-2","TGAAGGCATAAAGGAC",4,46.05,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","T15K W23R L38I K56P F70E K87V Y91R W106V",8
"lib1","SARS-CoV-2","TGAAGGCATAGACTGA",2,9.85,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","V11T Y35L S45P T63Y Y93L Y119H F134I Y165L",8
"lib1","SARS-CoV-2","TGAAGGCCCGAGCTAT",2,25.91,10.28,-0.49,0.12,2.63,1.03,0.01,">1 nonsynonymous","N13D S36D",2
"lib1","SARS-CoV-2","TGAAGGCGCACAACCA",1,12.66,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","S36C V103E N171S",3
"lib1","SARS-CoV-2","TGAAGGGAAATCTTAC",1,12.54,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D34A S45Y N64I",3
"lib1","SARS-CoV-2","TGAAGGGCTCAACATA",3,41.11,10.37,-0.39,0.07,2.84,1.1,0,"1 nonsynonymous","G155N",1
"lib1","SARS-CoV-2","TGAAGGGCTTGACTCC",8,49.37,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L60M N120A V180E",3
"lib1","SARS-CoV-2","TGAAGGTGGTCTAAAA",2,33.64,7.94,-2.83,0.22,1.5,1.16,0.01,">1 nonsynonymous","D112L I142F",2
"lib1","SARS-CoV-2","TGAAGGTGGTGAACTA",3,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F A105S N130L E141L",4
"lib1","SARS-CoV-2","TGAAGGTTAAGAACTA",3,64.59,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","R127H E135L F167P",3
"lib1","SARS-CoV-2","TGAAGGTTTACGAAAA",2,23.44,6.25,-4.51,0.44,1.5,1.11,0.01,">1 nonsynonymous","W23S K48W A81N T85P W106L Y123T Y175L",7
"lib1","SARS-CoV-2","TGAAGTAAAAAATAGG",2,11.22,6,-4.76,1.27,3,1.17,0.01,">1 nonsynonymous","N13H S36G N107L",3
"lib1","SARS-CoV-2","TGAAGTAAACAGATAC",8,32.96,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A42G V71Q P133A Y143T G174W",5
"lib1","SARS-CoV-2","TGAAGTAAAGTGAATC",4,49.2,10.2,-0.57,0.08,2.65,1.01,0,">1 nonsynonymous","T3P D34A N120Q I142V",4
"lib1","SARS-CoV-2","TGAAGTAACACGAAAA",5,59.73,10.09,-0.68,0.07,2.82,1.01,0,">1 nonsynonymous","C61R Q84L N151Y",3
"lib1","SARS-CoV-2","TGAAGTAAGTCTCGAT",10,68.88,6.71,-4.06,0.47,1.5,1.22,0.03,">1 nonsynonymous","N4Q F99S S147I",3
"lib1","SARS-CoV-2","TGAAGTAATGATGTGA",2,21.91,9.57,-1.2,0.06,2.03,1.06,0,">1 nonsynonymous","K56S P82T",2
"lib1","SARS-CoV-2","TGAAGTAGTAGACACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S N58T V173R",3
"lib1","SARS-CoV-2","TGAAGTCAAACTTAAT",5,31.77,10.62,-0.14,0.05,2.92,1.06,0,">1 nonsynonymous","L5K S41R L162I",3
"lib1","SARS-CoV-2","TGAAGTCACATAAAAT",3,16.06,6.73,-4.04,0.53,1.5,1.17,0.04,">1 nonsynonymous","G86R P161L",2
"lib1","SARS-CoV-2","TGAAGTCCACCGACGG",2,28.12,9.76,-1,0.11,2.81,1.19,0.01,">1 nonsynonymous","E154H G174N",2
"lib1","SARS-CoV-2","TGAAGTCTAAATGCAT",2,39.15,6.06,-4.71,1.52,1.5,1.17,0.03,">1 nonsynonymous","S29Y P161N R179A",3
"lib1","SARS-CoV-2","TGAAGTGAAAATCCCT",4,67.36,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9M G74M I80K G101L Y175M",5
"lib1","SARS-CoV-2","TGAAGTGACAGTGACG",3,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96C V103F",2
"lib1","SARS-CoV-2","TGAAGTGGAGACGCGT",1,11.75,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G83T Q168C P177A",3
"lib1","SARS-CoV-2","TGAAGTTACGCATTAT",3,56.05,10.29,-0.48,0.08,2.82,1,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","TGAAGTTAGGTATAGA",6,9.57,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","I88D E141M",2
"lib1","SARS-CoV-2","TGAAGTTCGAAAAACT",3,108.99,10.77,0.01,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAAGTTCGAGCATAG",2,69.23,6.94,-3.83,0.41,1.5,1.12,0.03,">1 nonsynonymous","D137Y N157C P161G",3
"lib1","SARS-CoV-2","TGAAGTTGTAGTGGAA",6,69.83,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","K48R T55A S113P V181K",4
"lib1","SARS-CoV-2","TGAAGTTTATTTTGCG",4,7.83,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","Y119I Q144C F156W S200L",4
"lib1","SARS-CoV-2","TGAAGTTTTGTTTCGG",11,71.33,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S45V P96L I104M Y123E",4
"lib1","SARS-CoV-2","TGAATAAAACACTATC",2,27.63,10.65,-0.11,0.06,2.94,1.03,0,">1 nonsynonymous","T100C V153R",2
"lib1","SARS-CoV-2","TGAATAAAATGCAAGT",1,11.18,6.1,-4.66,0.33,1.5,1.01,0,">1 nonsynonymous","R27A F47A S139N F167G",4
"lib1","SARS-CoV-2","TGAATAAAATGTCCAA",2,15.93,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","A67S E135D G172P",3
"lib1","SARS-CoV-2","TGAATAAACTAGCGAG",11,124.58,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N30R Y50H K128Y G152L G172H",5
"lib1","SARS-CoV-2","TGAATAAAGAAACCGC",5,58.65,10.53,-0.23,0.05,2.91,1.02,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","TGAATAAAGACTGTAT",3,83.51,10.87,0.11,0.08,2.92,1.04,0,"1 nonsynonymous","L122Q",1
"lib1","SARS-CoV-2","TGAATAAAGTCCTCCT",4,11.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S45F I88L K114W V115L S139K",5
"lib1","SARS-CoV-2","TGAATAAATCGACCTG",1,20.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S36Y Y121A Y178E",3
"lib1","SARS-CoV-2","TGAATAAATGTCAAGG",1,9.17,11,0.24,0.41,2.5,1.04,0.03,"synonymous","",0
"lib1","SARS-CoV-2","TGAATAACAACTATAT",7,55.67,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","C6E V11P R127P N157L",4
"lib1","SARS-CoV-2","TGAATAACCGGAATGA",5,55.34,9.97,-0.8,0.08,1.94,1.04,0,">1 nonsynonymous","N1T T46L L57W S139E",4
"lib1","SARS-CoV-2","TGAATAACGACCTATC",1,34.43,8.64,-2.13,0.08,2.79,1.06,0,">1 nonsynonymous","D75S Y175M",2
"lib1","SARS-CoV-2","TGAATAACGATAGCGC",8,124.88,10.12,-0.64,0.09,2.55,1.01,0,">1 nonsynonymous","K56L T100S S184C",3
"lib1","SARS-CoV-2","TGAATAACTGTCCGTG",16,247.45,10.73,-0.04,0.04,2.91,1.06,0,">1 nonsynonymous","T100H E141D",2
"lib1","SARS-CoV-2","TGAATAAGTTAAAACA",1,0.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91T",1
"lib1","SARS-CoV-2","TGAATAAGTTCGACTC",3,94.77,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","L95P F167A",2
"lib1","SARS-CoV-2","TGAATAATAACAAGTG",2,10.04,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","G9L V37Q L95D A105H T148F",5
"lib1","SARS-CoV-2","TGAATAATAAGAAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","R27* C61S Y91R Y119A E141S R179L",6
"lib1","SARS-CoV-2","TGAATAATCAAGCTAT",2,6.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G V37K A81T",3
"lib1","SARS-CoV-2","TGAATAATCCATAGTA",2,11.32,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F12Y D75Q Y165F",3
"lib1","SARS-CoV-2","TGAATAATCTATACCT",4,58.54,10.81,0.04,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATAATTACTCCCT",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R A14D A33S C61P A105K N118L",6
"lib1","SARS-CoV-2","TGAATAATTTCTATGT",2,17.39,10.33,-0.44,0.06,3,1,0,">1 nonsynonymous","S43T P54Q A81S I138D",4
"lib1","SARS-CoV-2","TGAATAATTTGAAAAG",2,11.2,NA,NA,NA,NA,NA,NA,"stop","F70T L122T K128* Y178D",4
"lib1","SARS-CoV-2","TGAATACAAAAGCATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R L95R C102M N109P G146R",5
"lib1","SARS-CoV-2","TGAATACAACAGATAA",18,5.52,NA,NA,NA,NA,NA,NA,"stop","N13D N24E L57* K87E N118Y",5
"lib1","SARS-CoV-2","TGAATACACAGACTCC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","P54S T170R L187*",3
"lib1","SARS-CoV-2","TGAATACACTACATAA",1,8.6,10.6,-0.17,0.1,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATACACTATAACA",6,54.64,6.13,-4.63,0.85,1.5,1.19,0.02,">1 nonsynonymous","G74W Q144V T201M",3
"lib1","SARS-CoV-2","TGAATACAGGATACCC",1,7.26,10.57,-0.2,0.23,2.77,1.11,0.02,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","TGAATACCACTGGCAA",7,166.67,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T46S D112R R179N",3
"lib1","SARS-CoV-2","TGAATACCCCTACTTG",4,79.01,9.14,-1.63,0.05,2.82,1.07,0,">1 nonsynonymous","G9P Y143V A190T",3
"lib1","SARS-CoV-2","TGAATACCCTGGTGTG",6,35.88,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F44V G51C C61T Y165P",4
"lib1","SARS-CoV-2","TGAATACGAAAAATAA",3,70.58,10.79,0.02,0.1,2.85,1.11,0,"1 nonsynonymous","N130C",1
"lib1","SARS-CoV-2","TGAATACTAATCAATA",5,25.84,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","G86I",1
"lib1","SARS-CoV-2","TGAATACTACATCCTC",1,6.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6S C102R V115Q P133C",4
"lib1","SARS-CoV-2","TGAATACTATTCTCCA",6,46.79,6,-4.76,2,1.5,1.2,0.08,">1 nonsynonymous","F12S Q84L Y119T T201Y",4
"lib1","SARS-CoV-2","TGAATACTTCAAATGA",1,8.67,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","C61V Y123N C150T F156T G172R",5
"lib1","SARS-CoV-2","TGAATAGAATTATGAC",1,30.07,10.8,0.03,0.07,2.88,1.03,0,">1 nonsynonymous","D98N L122G I142L",3
"lib1","SARS-CoV-2","TGAATAGACCTAATCG",4,48.62,10.63,-0.14,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATAGACTAAACGT",6,121.46,10.69,-0.07,0.07,2.86,1.09,0,"1 nonsynonymous","G83N",1
"lib1","SARS-CoV-2","TGAATAGAGTTAGGAC",4,7.61,8.39,-2.37,0.32,1.69,1.06,0.05,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","TGAATAGCCACAAGCA",1,32.77,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G86V D98P L125A L188E T201R",5
"lib1","SARS-CoV-2","TGAATAGCCATGTATG",2,35.99,9.09,-1.68,0.08,2.9,1.13,0,">1 nonsynonymous","Y119S E141L",2
"lib1","SARS-CoV-2","TGAATAGCCCTTTCTC",2,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R Y39K C49Y V65M V173R",5
"lib1","SARS-CoV-2","TGAATAGCGTGTATAT",5,41.56,10.76,-0.01,0.05,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATAGTAACGCTCT",1,6.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W L38I A105N K199H",4
"lib1","SARS-CoV-2","TGAATATACAGTAACT",3,80.86,10.7,-0.06,0.04,2.95,1,0,"1 nonsynonymous","N120F",1
"lib1","SARS-CoV-2","TGAATATACTAGAAGG",4,1.5,NA,NA,NA,NA,NA,NA,"stop","L5R F12* A18Q D59N",4
"lib1","SARS-CoV-2","TGAATATAGAAAAGAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","I2* F12S G83K W106*",4
"lib1","SARS-CoV-2","TGAATATATCATCTAT",2,41.78,10.7,-0.06,0.05,2.93,1.06,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TGAATATCCACAGTGT",11,33.9,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","E10L F17L P82N G116S K199S",5
"lib1","SARS-CoV-2","TGAATATGCCACCGAT",1,73.34,10.51,-0.25,0.06,2.86,1.04,0,">1 nonsynonymous","S29R D90H Y178H",3
"lib1","SARS-CoV-2","TGAATATGCCTCATGT",2,33.23,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I80F G174I",2
"lib1","SARS-CoV-2","TGAATATTAACACTAG",5,0.6,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","TGAATATTAAGTATCG",3,25.43,10.27,-0.5,0.1,2.74,1.02,0,">1 nonsynonymous","C6I A42K C61G",3
"lib1","SARS-CoV-2","TGAATATTACACAGGG",6,18.98,6,-4.76,2,1.5,1.41,0.06,">1 nonsynonymous","P96C D112H",2
"lib1","SARS-CoV-2","TGAATATTCGTGAGAA",4,141.87,10.49,-0.27,0.04,2.89,1.01,0,">1 nonsynonymous","A42V F47Y",2
"lib1","SARS-CoV-2","TGAATATTCTCCAATG",3,39.09,6,-4.76,0.95,1.5,1.18,0.01,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","TGAATATTGTTTTAAT",1,11.59,9.93,-0.83,0.24,2.39,1.01,0.05,">1 nonsynonymous","K48E K87A W106R",3
"lib1","SARS-CoV-2","TGAATATTTGAACCGT",6,197.38,10.48,-0.29,0.03,2.87,1.04,0,"1 nonsynonymous","R127K",1
"lib1","SARS-CoV-2","TGAATCAACCGTTCAT",2,12.01,6,-4.76,2,1.5,1.31,0.06,">1 nonsynonymous","Y35L T55I G116S L122N K132L F167M",6
"lib1","SARS-CoV-2","TGAATCAGCATCCTAC",5,84.4,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","K56R R124M I142E",3
"lib1","SARS-CoV-2","TGAATCATAAAGTAGC",6,39.68,10.64,-0.12,0.06,2.98,1,0,">1 nonsynonymous","T46M K56M C195L",3
"lib1","SARS-CoV-2","TGAATCATATGGCAAC",11,73.78,6,-4.76,0.99,1.5,1.18,0.01,"1 nonsynonymous","G86V",1
"lib1","SARS-CoV-2","TGAATCATGCTACGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","TGAATCATGGCGAATA",2,15.75,10.83,0.06,0.14,2.64,1.28,0.01,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","TGAATCCAAACACCTA",3,85.18,10.6,-0.17,0.07,2.89,1.04,0,"1 nonsynonymous","K87H",1
"lib1","SARS-CoV-2","TGAATCCAACTATAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P R127L P149L",3
"lib1","SARS-CoV-2","TGAATCCATTAAATAA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","P82* A105N Y143L T170*",4
"lib1","SARS-CoV-2","TGAATCCGCCCAACAA",6,0.82,NA,NA,NA,NA,NA,NA,"stop","P7H Y35T P82A R179*",4
"lib1","SARS-CoV-2","TGAATCCGGTACATTA",1,60.57,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","F167V",1
"lib1","SARS-CoV-2","TGAATCCTAATTATGG",2,1.47,NA,NA,NA,NA,NA,NA,"stop","V77* K94N S139M",3
"lib1","SARS-CoV-2","TGAATCCTTATCCCCC",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R D98N R127V K198D",4
"lib1","SARS-CoV-2","TGAATCTCCCATTGAC",1,3.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","TGAATCTGATCTGAAA",1,58.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L95S Y119N",2
"lib1","SARS-CoV-2","TGAATCTGATGGTTGT",1,38.59,8.46,-2.31,0.12,2.01,1.08,0.01,">1 nonsynonymous","P96R L125P",2
"lib1","SARS-CoV-2","TGAATCTTGATCAGGG",1,33.22,8.74,-2.02,0.14,1.66,1.22,0.01,">1 nonsynonymous","V20S Y39H K128G T201R",4
"lib1","SARS-CoV-2","TGAATCTTTTTCCGCC",6,67.6,6,-4.76,1.65,1.5,1.14,0.01,">1 nonsynonymous","W23L F44H K128I",3
"lib1","SARS-CoV-2","TGAATGAAACATCCAT",2,63.55,7.59,-3.17,0.28,1.5,1.11,0.02,">1 nonsynonymous","Y91E G196L",2
"lib1","SARS-CoV-2","TGAATGAACCAATGGC",6,184.67,7.28,-3.48,0.18,1.5,1.11,0.01,">1 nonsynonymous","D68E K87V Y119D",3
"lib1","SARS-CoV-2","TGAATGACAATGAAGG",2,76.61,6.06,-4.71,0.8,1.5,1.2,0.02,">1 nonsynonymous","G9S Y35D D59E Q176R",4
"lib1","SARS-CoV-2","TGAATGACCCGATCAA",2,17.92,6,-4.76,2,3,1.05,0,">1 nonsynonymous","S113D P133I V173L K198F",4
"lib1","SARS-CoV-2","TGAATGACTAAATGTG",5,68.43,10.77,0.01,0.09,2.89,1.08,0,"1 nonsynonymous","P197C",1
"lib1","SARS-CoV-2","TGAATGACTCCCCCAA",1,5.53,6,-4.76,2,3,1.23,0.02,">1 nonsynonymous","P82W Y165T",2
"lib1","SARS-CoV-2","TGAATGAGAGCAAATC",1,12.81,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","S41R G83K C102R K199G",4
"lib1","SARS-CoV-2","TGAATGAGATAGAAAT",9,5.83,NA,NA,NA,NA,NA,NA,"stop","N4Q K56*",2
"lib1","SARS-CoV-2","TGAATGAGTAGAATAG",2,40.01,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V37F A81M D112A P161I",4
"lib1","SARS-CoV-2","TGAATGATAATCACGA",1,2.08,NA,NA,NA,NA,NA,NA,"stop","A33C A67D G86V R124K K132*",5
"lib1","SARS-CoV-2","TGAATGATCTAACAAT",3,40.77,10.84,0.08,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATGATGGTACAGG",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R F62N F70S",3
"lib1","SARS-CoV-2","TGAATGATTTCATTTT",9,77.02,9.37,-1.39,0.16,1.57,1.23,0.01,"1 nonsynonymous","P96Y",1
"lib1","SARS-CoV-2","TGAATGCAACAACAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","C61S N107*",2
"lib1","SARS-CoV-2","TGAATGCAAGGCACCG",4,95.7,9.77,-1,0.06,2.87,1.04,0,"1 nonsynonymous","G166V",1
"lib1","SARS-CoV-2","TGAATGCAGAAGGTAA",6,13.49,NA,NA,NA,NA,NA,NA,"stop","I2G G51* F160Q",3
"lib1","SARS-CoV-2","TGAATGCCCCTAGCAT",2,1.54,NA,NA,NA,NA,NA,NA,"stop","F62* S108R K114R Y121* G166C",5
"lib1","SARS-CoV-2","TGAATGCCGCATACAA",10,86.78,10.76,-0.01,0.06,2.93,1.05,0,"1 nonsynonymous","K56N",1
"lib1","SARS-CoV-2","TGAATGCCTGTCAAAT",1,30.42,6,-4.76,1.19,1.5,1.09,0.02,">1 nonsynonymous","A105L R127I D137G",3
"lib1","SARS-CoV-2","TGAATGCGCTTAAGGA",2,0.7,NA,NA,NA,NA,NA,NA,"stop","V11* C49* K56E A105Y F167L",5
"lib1","SARS-CoV-2","TGAATGCGGTTGATAA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H A89F R136P",3
"lib1","SARS-CoV-2","TGAATGCTGCAAGCCA",5,39.78,10.09,-0.67,0.08,2.41,1.07,0,">1 nonsynonymous","V37L Y91G",2
"lib1","SARS-CoV-2","TGAATGCTTGTTTTTA",1,6.13,NA,NA,NA,NA,NA,NA,"stop","S113W R124* E154K K198*",4
"lib1","SARS-CoV-2","TGAATGGAATAGAACA",2,64.22,10.89,0.13,0.07,2.93,1,0,"1 nonsynonymous","L122E",1
"lib1","SARS-CoV-2","TGAATGGACCTTGACC",2,49.97,6.22,-4.54,0.46,1.5,1.17,0.01,">1 nonsynonymous","T15L Y35I G101A Y159L Y175E",5
"lib1","SARS-CoV-2","TGAATGGATGATGGCC",8,189.33,10.25,-0.52,0.04,2.78,1.01,0,">1 nonsynonymous","A22S F62A P96N I104F",4
"lib1","SARS-CoV-2","TGAATGGCTACTTAAT",1,49.95,10.19,-0.58,0.12,2.6,1.01,0,">1 nonsynonymous","F62N E186Y",2
"lib1","SARS-CoV-2","TGAATGTATAGGTGAA",2,7.49,6.67,-4.09,0.27,2.14,1.09,0.02,">1 nonsynonymous","C61I F99Y W106T",3
"lib1","SARS-CoV-2","TGAATGTGGATATCCC",3,25.94,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K87T P96Y I138S N151S",4
"lib1","SARS-CoV-2","TGAATGTGGATGAGAC",5,79.63,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20W R27Q Y93L F156S F167A",5
"lib1","SARS-CoV-2","TGAATGTGGTATCACT",3,58.12,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","C61V Y93L C158M",3
"lib1","SARS-CoV-2","TGAATGTTAAAGCTAT",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69L V103L",2
"lib1","SARS-CoV-2","TGAATGTTTAGGTACG",3,123.13,10.23,-0.53,0.04,2.92,1,0,"1 nonsynonymous","N107G",1
"lib1","SARS-CoV-2","TGAATTAAAAAATAAA",8,38.04,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","R25S D68S N107Q",3
"lib1","SARS-CoV-2","TGAATTAAAGAAGGTG",2,12.79,10.18,-0.59,0.12,2.8,1,0.01,"1 nonsynonymous","E186L",1
"lib1","SARS-CoV-2","TGAATTAAAGATCACG",2,14.23,10.56,-0.21,0.12,2.7,1.04,0.01,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","TGAATTAAATATGTTG",1,23.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A18F D90V D98R",3
"lib1","SARS-CoV-2","TGAATTAACGTATGCT",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L K94Y C150Y",3
"lib1","SARS-CoV-2","TGAATTAAGAACGATT",1,7.95,8.86,-1.91,0.29,2.87,1.07,0.02,">1 nonsynonymous","F126K E141F",2
"lib1","SARS-CoV-2","TGAATTAAGTTCATAA",2,34.46,10.78,0.02,0.05,2.94,1.03,0,">1 nonsynonymous","T100L E141S",2
"lib1","SARS-CoV-2","TGAATTAATCAACAAA",2,46.98,9.03,-1.73,0.07,2.82,1.14,0,">1 nonsynonymous","Y119L S164V",2
"lib1","SARS-CoV-2","TGAATTACAACCATAC",2,23.15,10.69,-0.07,0.06,2.9,1.01,0,">1 nonsynonymous","C61R I88V",2
"lib1","SARS-CoV-2","TGAATTAGATCAGGGT",9,214.5,8.18,-2.59,0.13,1.58,1.13,0.01,">1 nonsynonymous","G51F F126C",2
"lib1","SARS-CoV-2","TGAATTAGCTGCTCAT",1,10.88,10.69,-0.08,0.15,2.89,1.06,0.01,"1 nonsynonymous","S43I",1
"lib1","SARS-CoV-2","TGAATTATAATGAGGT",8,47.2,6.39,-4.37,0.32,1.5,1.12,0.01,">1 nonsynonymous","L38H G83L R127W",3
"lib1","SARS-CoV-2","TGAATTATATGATTCA",8,37.68,10.72,-0.04,0.05,2.82,1.13,0,"1 nonsynonymous","L122Y",1
"lib1","SARS-CoV-2","TGAATTATTAGTATAG",5,92.25,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N4L G9E G74F G116C R136M",5
"lib1","SARS-CoV-2","TGAATTATTGAAAAAA",2,18.11,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A18V I80T V103M",3
"lib1","SARS-CoV-2","TGAATTCAAAGCTCGT",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y S53I I88L",3
"lib1","SARS-CoV-2","TGAATTCACAACATCA",4,91.28,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P7V R27C K94M E141Y T201D",5
"lib1","SARS-CoV-2","TGAATTCACGACCAAA",2,67.51,10.63,-0.13,0.05,2.98,1,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","TGAATTCCATAGGGAC",3,22.66,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S41W L57E A145D Y159K",4
"lib1","SARS-CoV-2","TGAATTCCTACTTCCA",2,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TGAATTCCTCTAGTAA",6,84.54,10.54,-0.22,0.04,2.97,1.01,0,">1 nonsynonymous","G9R N40K T201H",3
"lib1","SARS-CoV-2","TGAATTCCTCTGAAAT",2,27.25,8.46,-2.31,0.28,2.22,1.26,0.03,">1 nonsynonymous","N1P G9N P161D",3
"lib1","SARS-CoV-2","TGAATTCGATTTTTAA",1,37.81,9.9,-0.87,0.08,2.66,1.07,0,">1 nonsynonymous","G83N P161E",2
"lib1","SARS-CoV-2","TGAATTCTAATAACAC",6,623.91,8.86,-1.91,0.06,2.81,1.07,0,"1 nonsynonymous","Y143Q",1
"lib1","SARS-CoV-2","TGAATTCTAATGATCA",5,52.85,6.23,-4.53,0.89,1.5,1.24,0.03,">1 nonsynonymous","F62V A89M N120H Y143I",4
"lib1","SARS-CoV-2","TGAATTCTACTCAACA",3,17.84,10.92,0.15,0.11,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATTCTGACCAGGA",1,1.39,NA,NA,NA,NA,NA,NA,"stop","P54V D90T K128W C195* T201S",5
"lib1","SARS-CoV-2","TGAATTCTTCAACAAA",2,50.97,9.82,-0.95,0.11,2.18,1.04,0.01,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","TGAATTCTTTTCGGCT",2,84.37,10.68,-0.09,0.06,2.89,1.06,0,">1 nonsynonymous","A33F Y123M",2
"lib1","SARS-CoV-2","TGAATTCTTTTGACCT",2,0.52,NA,NA,NA,NA,NA,NA,"stop","N1G Y50* Y91P I104K",4
"lib1","SARS-CoV-2","TGAATTGAACACCACC",5,95.95,10.67,-0.1,0.05,2.93,1,0,"1 nonsynonymous","A33E",1
"lib1","SARS-CoV-2","TGAATTGAGGCACTTG",4,17.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V77S N120L N130T C150V",4
"lib1","SARS-CoV-2","TGAATTGAGGCCATAG",2,65.04,10.63,-0.14,0.07,2.83,1.1,0,">1 nonsynonymous","L5K K48R K56H D98V",4
"lib1","SARS-CoV-2","TGAATTGATAGTGGAT",2,28.26,8.21,-2.56,0.18,1.5,1.04,0.01,">1 nonsynonymous","L5E L95A",2
"lib1","SARS-CoV-2","TGAATTGGAGTACGCT",6,1.36,NA,NA,NA,NA,NA,NA,"stop","S45H C49Y K94R T201*",4
"lib1","SARS-CoV-2","TGAATTGGGCCAAGAT",7,17.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F C158W",2
"lib1","SARS-CoV-2","TGAATTGGTAAGAGTA",3,12.02,10.19,-0.57,0.23,2.97,1,0.03,"1 nonsynonymous","P177A",1
"lib1","SARS-CoV-2","TGAATTGTACTTATGA",2,23.18,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","Y93H Q176K",2
"lib1","SARS-CoV-2","TGAATTGTATTTCTGA",1,74.96,10.68,-0.09,0.05,3,1,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","TGAATTGTTACCAAGG",3,36.62,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","R16N A22Q V103R S113E",4
"lib1","SARS-CoV-2","TGAATTTAAAAAGTAT",6,1.28,NA,NA,NA,NA,NA,NA,"stop","Y39P D59K G83W L95C K114* G152I F167V",7
"lib1","SARS-CoV-2","TGAATTTGAAGATTCC",4,20.41,7.31,-3.46,0.19,1.5,1.13,0.01,">1 nonsynonymous","T3I T55N A81H K94D R124Q P149L",6
"lib1","SARS-CoV-2","TGAATTTTAGCTGCTG",5,105.02,10.72,-0.04,0.07,2.88,1.08,0,"1 nonsynonymous","T201Y",1
"lib1","SARS-CoV-2","TGAATTTTAGGCTTAA",2,63.19,10.65,-0.12,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAATTTTATTCCAAC",5,53.08,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","G9D S41T V103F P149Y T201L",5
"lib1","SARS-CoV-2","TGAATTTTCTTCCATA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I72K V103*",2
"lib1","SARS-CoV-2","TGAATTTTGAACGTGG",2,23.4,6.78,-3.98,0.54,1.5,1.3,0.03,">1 nonsynonymous","L57S T63R Q79L T100I",4
"lib1","SARS-CoV-2","TGAATTTTTAAATATT",5,32.5,7.33,-3.44,0.23,1.5,1.15,0.01,">1 nonsynonymous","K48D D68E",2
"lib1","SARS-CoV-2","TGAATTTTTACATTTC",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N L187E",2
"lib1","SARS-CoV-2","TGAATTTTTAGCGGTA",5,29.83,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N40R V71Y",2
"lib1","SARS-CoV-2","TGACAAAAAAAAGCAG",2,26.97,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","G117Q C150D",2
"lib1","SARS-CoV-2","TGACAAAAAAACCTGT",3,13.3,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","F8L Q79M Q84L P96Y",4
"lib1","SARS-CoV-2","TGACAAAAAGGTATGA",1,6.38,6,-4.76,2,1.5,1.02,0.01,">1 nonsynonymous","K56F D90V N107M",3
"lib1","SARS-CoV-2","TGACAAAAAGTAAAAA",1,37.4,10.89,0.13,0.08,2.87,1.06,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","TGACAAAAATATAAAA",4,10.15,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","N13E S45Y D59I F160I Q168D",5
"lib1","SARS-CoV-2","TGACAAAAGCAGACAT",9,32.37,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R27L A42L L95N T148M P161L T201G",6
"lib1","SARS-CoV-2","TGACAAAAGCTTGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P54* C150M",2
"lib1","SARS-CoV-2","TGACAAACAAAGTCAA",7,41.29,8.88,-1.89,0.42,1.5,1,0.07,">1 nonsynonymous","S29G C49D I104H",3
"lib1","SARS-CoV-2","TGACAAACCAGCCATC",3,65.6,10.77,0,0.08,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACAAACTAATTTGT",5,71.94,6.11,-4.65,1.36,1.5,1.33,0.05,">1 nonsynonymous","S19W F160L",2
"lib1","SARS-CoV-2","TGACAAACTAGTTCCG",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y A105H Y121Q C150S V173W",5
"lib1","SARS-CoV-2","TGACAAACTATCGAAA",2,26.36,10.63,-0.13,0.13,2.92,1.04,0.01,">1 nonsynonymous","S41T P149A",2
"lib1","SARS-CoV-2","TGACAAAGAAAAGTGT",1,19.1,6.58,-4.18,0.39,1.5,1.16,0.02,">1 nonsynonymous","L57T V103L C158L",3
"lib1","SARS-CoV-2","TGACAAAGTCCCATCA",3,9.88,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","G83V Y91H I104A K132R T170A",5
"lib1","SARS-CoV-2","TGACAAATCATTCGCC",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H V11T G101H",3
"lib1","SARS-CoV-2","TGACAACAAAATGTTC",4,22.09,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C6P T85R F99I N107K",4
"lib1","SARS-CoV-2","TGACAACACCCTGAGA",6,0.45,NA,NA,NA,NA,NA,NA,"stop","I2S G9D A42T A89L N110* P133L Y143V",7
"lib1","SARS-CoV-2","TGACAACCGATCCCCT",3,11.5,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58T V180S",2
"lib1","SARS-CoV-2","TGACAACCTATACTCA",9,80.8,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K87M N118R C150H N157I",4
"lib1","SARS-CoV-2","TGACAACTACACTTCA",2,24,6,-4.76,2,1.5,1.27,0.05,"1 nonsynonymous","N92T",1
"lib1","SARS-CoV-2","TGACAACTTAAAAAAA",4,100.91,10.12,-0.64,0.05,2.87,1.01,0,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","TGACAAGAACCGTGAT",2,19.25,10.79,0.02,0.12,2.82,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACAAGAGGAATAGA",3,35.96,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N40T V65R Y121T",3
"lib1","SARS-CoV-2","TGACAAGATATCCCCC",9,224.82,9.92,-0.84,0.07,2.51,1.05,0,">1 nonsynonymous","C6T K48L",2
"lib1","SARS-CoV-2","TGACAAGCTGATTCGA",5,35.83,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C61A G86E D97N Y123S",4
"lib1","SARS-CoV-2","TGACAAGCTGTGACTT",3,4.43,NA,NA,NA,NA,NA,NA,"stop","A42L G51C D59T Q84* L95K F99L",6
"lib1","SARS-CoV-2","TGACAAGGGCGTAGAG",1,32.61,10.21,-0.56,0.09,2.78,1,0,"1 nonsynonymous","N40I",1
"lib1","SARS-CoV-2","TGACAAGGGGTCAGTT",6,88.82,9.84,-0.92,0.09,2.32,1.06,0,">1 nonsynonymous","N4H A14G V37C P54A Y121F",5
"lib1","SARS-CoV-2","TGACAAGTAAAATAAG",1,5.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86L",1
"lib1","SARS-CoV-2","TGACAAGTACTAATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M A42F C61I I88Y N107T T201M",6
"lib1","SARS-CoV-2","TGACAAGTGGTGAAGG",2,29.15,9.39,-1.38,0.24,1.77,1.15,0.02,">1 nonsynonymous","N107T P149T",2
"lib1","SARS-CoV-2","TGACAATAAATAGTTA",9,50.74,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C61V G83A G86A P161T",4
"lib1","SARS-CoV-2","TGACAATCTAACGACC",3,27.55,10.68,-0.08,0.06,2.93,1.02,0,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","TGACAATCTCCCCAAC",3,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K Y119K E154K F156M",4
"lib1","SARS-CoV-2","TGACAATTACCGTACC",7,118.16,10.82,0.05,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACAATTTGTACAGC",10,116.1,6.19,-4.58,0.4,1.5,1.18,0.01,">1 nonsynonymous","F62N Q144S C150A",3
"lib1","SARS-CoV-2","TGACACAAAAGAAGTT",10,50.44,7.26,-3.51,0.27,1.5,1.1,0.02,">1 nonsynonymous","F8V W23K A42H",3
"lib1","SARS-CoV-2","TGACACAATACCTCAT",1,21.34,6,-4.76,2,1.5,1.13,0.02,"1 nonsynonymous","F70T",1
"lib1","SARS-CoV-2","TGACACAATACTCTTT",7,47.64,10.03,-0.74,0.1,2.58,1.02,0,">1 nonsynonymous","N4E R16C D98L",3
"lib1","SARS-CoV-2","TGACACACAACAAGAA",2,36.8,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","C102W N107R Y121K G172K",4
"lib1","SARS-CoV-2","TGACACACATTTTGAA",2,20.99,6.25,-4.51,0.87,1.5,1.19,0.05,">1 nonsynonymous","D90I D98T N157Y A192E",4
"lib1","SARS-CoV-2","TGACACACTACCAAAT",9,118.89,8.42,-2.34,0.17,1.5,1.05,0.01,">1 nonsynonymous","Q84K D90T Y123N",3
"lib1","SARS-CoV-2","TGACACACTGTCAAGA",1,13.21,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","Y21C S36H C49N T55N C102P K114E T148L H189T",8
"lib1","SARS-CoV-2","TGACACAGTATACCAT",2,1.4,NA,NA,NA,NA,NA,NA,"stop","N13G A33R C61R V71*",4
"lib1","SARS-CoV-2","TGACACAGTGCCATAA",2,19.34,9.22,-1.54,0.09,2.94,1.05,0,">1 nonsynonymous","L125G G155F",2
"lib1","SARS-CoV-2","TGACACAGTTCTGACA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","D34* G155S",2
"lib1","SARS-CoV-2","TGACACAGTTTCAAGG",2,47.94,6,-4.76,1.57,1.5,1.2,0.02,">1 nonsynonymous","D97S P161H",2
"lib1","SARS-CoV-2","TGACACATAGCTATCG",4,70.47,10.7,-0.06,0.03,2.93,1.04,0,">1 nonsynonymous","S53L C61E",2
"lib1","SARS-CoV-2","TGACACATCACTTACT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","I72S S108* D112V P149N",4
"lib1","SARS-CoV-2","TGACACATCCAAGAAA",1,1.66,NA,NA,NA,NA,NA,NA,"stop","A42* N118S",2
"lib1","SARS-CoV-2","TGACACATCGATTAAC",2,32.79,10.43,-0.34,0.07,2.84,1.11,0,">1 nonsynonymous","L95V G116E S129G",3
"lib1","SARS-CoV-2","TGACACCCAACCTAAA",1,51.26,10.71,-0.05,0.06,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACACCCGTCCTCGA",10,146.27,9.84,-0.93,0.14,1.84,1.09,0.01,">1 nonsynonymous","Y50T T140A",2
"lib1","SARS-CoV-2","TGACACCGAGGAACAT",3,17.96,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77P W106V G172R",3
"lib1","SARS-CoV-2","TGACACCTAAAAACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","N4W T46H T55* N120T K128L",5
"lib1","SARS-CoV-2","TGACACCTACACCCGG",6,42.84,9.85,-0.91,0.08,2.16,1.06,0,">1 nonsynonymous","F8V K48L S164P",3
"lib1","SARS-CoV-2","TGACACGAGTAATCGA",6,93.85,6.65,-4.11,0.4,1.5,1.21,0.02,">1 nonsynonymous","I2D N107V P149G G152K",4
"lib1","SARS-CoV-2","TGACACGAGTCCCGAA",4,29.37,10.12,-0.64,0.12,2.32,1,0.01,">1 nonsynonymous","N24I C61F",2
"lib1","SARS-CoV-2","TGACACGATAATAGTT",3,122.69,10.75,-0.01,0.08,2.88,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TGACACGATCGAGTCG",2,9.26,6.27,-4.49,0.34,3,1.11,0.01,">1 nonsynonymous","G9D G101M G117F",3
"lib1","SARS-CoV-2","TGACACGATCGGGAGC",7,170.75,10.73,-0.03,0.05,2.92,1.02,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","TGACACGCATCGGCAC",1,10.13,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P82T D90G S200D",3
"lib1","SARS-CoV-2","TGACACGCCTAGAAAA",1,1.62,NA,NA,NA,NA,NA,NA,"stop","C61I K87* Y175S K199*",4
"lib1","SARS-CoV-2","TGACACGGATGTGTAT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P G146V",2
"lib1","SARS-CoV-2","TGACACGTACAATCAA",2,10.85,9.4,-1.36,0.14,2.92,1.02,0.01,"1 nonsynonymous","G117M",1
"lib1","SARS-CoV-2","TGACACTGAATTGGTA",4,114.41,9.12,-1.64,0.07,2.74,1.08,0,">1 nonsynonymous","L38M E141R T170G",3
"lib1","SARS-CoV-2","TGACACTGACTGTAAT",2,81.28,10.72,-0.04,0.06,2.87,1.06,0,">1 nonsynonymous","L5E A14S",2
"lib1","SARS-CoV-2","TGACACTGCAGAATTA",1,1.84,NA,NA,NA,NA,NA,NA,"stop","E10G G83I Y119* Q144S",4
"lib1","SARS-CoV-2","TGACACTTTACCTGGT",2,0.64,NA,NA,NA,NA,NA,NA,"stop","Y39T D98* F126Y",3
"lib1","SARS-CoV-2","TGACAGAACCAAAAAT",3,55.49,10.19,-0.57,0.09,2.78,1.04,0,">1 nonsynonymous","A33Y E141S Q168S T201L",4
"lib1","SARS-CoV-2","TGACAGACAACAAGAA",4,168.02,10.07,-0.7,0.08,2.34,1.02,0,"1 nonsynonymous","W106I",1
"lib1","SARS-CoV-2","TGACAGAGTTGATAGA",1,22.71,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R16S K94V Y119E E154D",4
"lib1","SARS-CoV-2","TGACAGATAAAGAAAC",2,10.08,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C31S E76K T85N D112S",4
"lib1","SARS-CoV-2","TGACAGCAATCGTGCC",2,39.12,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","S41T I88L A105R T201E",4
"lib1","SARS-CoV-2","TGACAGCGGTGATCTC",8,48.05,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S53Y G83S L95N",3
"lib1","SARS-CoV-2","TGACAGCTAATGAAGC",6,118.28,10.46,-0.3,0.04,2.86,1.06,0,"1 nonsynonymous","Y123L",1
"lib1","SARS-CoV-2","TGACAGGCATACGGCG",3,29.82,9.94,-0.82,0.12,2.02,1.01,0.01,">1 nonsynonymous","C61D E76T",2
"lib1","SARS-CoV-2","TGACAGTACAGAAGAG",3,16.98,9.02,-1.75,0.34,1.5,1.06,0.06,">1 nonsynonymous","W106R R136S",2
"lib1","SARS-CoV-2","TGACAGTAGCTAAATA",3,73.33,6.55,-4.21,0.54,1.5,1.18,0.04,">1 nonsynonymous","R16T D90Y P133T P177Q",4
"lib1","SARS-CoV-2","TGACAGTATTGGAAAT",4,0.81,NA,NA,NA,NA,NA,NA,"stop","C6I F62I W106* N107W G116P",5
"lib1","SARS-CoV-2","TGACAGTCTTTTAGGA",3,34.65,10.56,-0.2,0.07,2.85,1.06,0,"1 nonsynonymous","L57W",1
"lib1","SARS-CoV-2","TGACAGTTACTGAGTG",1,13.01,10.69,-0.08,0.1,2.83,1,0.01,">1 nonsynonymous","S41D D90S V173C",3
"lib1","SARS-CoV-2","TGACAGTTAGGTCGTA",4,80.31,10.59,-0.17,0.07,2.97,1.01,0,">1 nonsynonymous","Y35L V65I D98P V173N P197T",5
"lib1","SARS-CoV-2","TGACATAAACACACCT",8,70.71,10.7,-0.07,0.05,2.91,1.04,0,"1 nonsynonymous","I28V",1
"lib1","SARS-CoV-2","TGACATAAAGCGGTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28F R73L N118T",3
"lib1","SARS-CoV-2","TGACATAAATTGTTAT",1,8.26,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","I2K F44M V103L A105T D137R T201P",6
"lib1","SARS-CoV-2","TGACATAAGATCATAT",4,47.31,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I28R Y50E G86I N107G",4
"lib1","SARS-CoV-2","TGACATAATGAGTTTT",1,10.32,9.57,-1.19,0.29,1.54,1.12,0.04,"1 nonsynonymous","D68F",1
"lib1","SARS-CoV-2","TGACATAATGTTCAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","F99G P149* G174R",3
"lib1","SARS-CoV-2","TGACATAATTGGATTA",4,45.35,8.64,-2.13,0.22,1.54,1.12,0.02,">1 nonsynonymous","C6V E135K K199V",3
"lib1","SARS-CoV-2","TGACATACCCACGGCT",2,94.08,9.02,-1.75,0.07,2.65,1.12,0,">1 nonsynonymous","G117Q S139N",2
"lib1","SARS-CoV-2","TGACATACCTCTGCCG",8,100.23,6.73,-4.03,0.32,1.5,1.1,0.02,">1 nonsynonymous","A22R L60R G116L P133L N171A",5
"lib1","SARS-CoV-2","TGACATACGTCTCACA",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107I K199M",2
"lib1","SARS-CoV-2","TGACATACTTCATTCA",5,2.62,NA,NA,NA,NA,NA,NA,"stop","V71L G117R T201*",3
"lib1","SARS-CoV-2","TGACATAGAAAGATAT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136D G166I L183S P197W",4
"lib1","SARS-CoV-2","TGACATATTACAAAAA",1,1.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","TGACATCAGGGTTGCC",2,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117E S129Y R179E",3
"lib1","SARS-CoV-2","TGACATCAGTAGCGGG",1,13.82,6.14,-4.62,0.91,1.5,1.1,0.04,">1 nonsynonymous","F8C F17R T46I F99C Y119H Y123S",6
"lib1","SARS-CoV-2","TGACATCCAGCACGCC",4,39.62,10.74,-0.03,0.09,2.9,1.03,0,">1 nonsynonymous","S43T S53V A190S",3
"lib1","SARS-CoV-2","TGACATCCGCCCTACC",4,148.47,10.38,-0.38,0.05,2.87,1.02,0,">1 nonsynonymous","T3W F156R",2
"lib1","SARS-CoV-2","TGACATCCTAATGCTG",5,46.43,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F12K K26P K128L",3
"lib1","SARS-CoV-2","TGACATCCTGCTTGGC",5,65.65,10.65,-0.11,0.08,2.86,1.1,0,"1 nonsynonymous","P149F",1
"lib1","SARS-CoV-2","TGACATCGAGCTGCAA",1,27.44,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","N4D I28L D90K S113L C158S T201M",6
"lib1","SARS-CoV-2","TGACATCTTACACAGA",2,13.03,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","Y35R V52L I88Y",3
"lib1","SARS-CoV-2","TGACATGAAAGCAGGT",7,126.68,10.72,-0.04,0.08,2.94,1.04,0,">1 nonsynonymous","K128S T201W",2
"lib1","SARS-CoV-2","TGACATGAAGATAAGT",4,118.02,10.76,-0.01,0.05,2.92,1.04,0,"1 nonsynonymous","I2N",1
"lib1","SARS-CoV-2","TGACATGAGACAAATG",5,6.68,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","G101H",1
"lib1","SARS-CoV-2","TGACATGATGAATTAT",9,7.22,NA,NA,NA,NA,NA,NA,"stop","R73L D90G P133Y S147* F167A",5
"lib1","SARS-CoV-2","TGACATGCAAATAAGG",1,31.67,10.71,-0.05,0.06,2.86,1.11,0,">1 nonsynonymous","G9E R27K A81R",3
"lib1","SARS-CoV-2","TGACATGCGATTAATG",2,15.17,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","A22R D97F Y143V V180R E186F",5
"lib1","SARS-CoV-2","TGACATGGGCCCACAT",4,3.44,NA,NA,NA,NA,NA,NA,"stop","V52* T63E Y93* K128V V173*",5
"lib1","SARS-CoV-2","TGACATGTATGCATAC",3,18.18,7.44,-3.32,0.2,1.5,1.09,0.01,">1 nonsynonymous","D90N L131T I142P",3
"lib1","SARS-CoV-2","TGACATGTGTCAGCTA",3,79.05,10.01,-0.75,0.07,2.56,1.02,0,">1 nonsynonymous","N1S G9V R78W Q84G",4
"lib1","SARS-CoV-2","TGACATGTGTTGAATT",2,30.34,10.16,-0.61,0.06,2.95,1.02,0,"1 nonsynonymous","A145C",1
"lib1","SARS-CoV-2","TGACATTCCACAGCGG",3,54.47,10.24,-0.52,0.07,2.58,1.01,0,"1 nonsynonymous","V71M",1
"lib1","SARS-CoV-2","TGACATTGACATGTAC",2,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S G146D G152I N157P",4
"lib1","SARS-CoV-2","TGACATTGATTGCCTA",7,62.73,10.75,-0.02,0.05,2.95,1.03,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","TGACATTGTACAGGCC",3,6.82,6.41,-4.35,0.73,1.5,1.36,0.03,">1 nonsynonymous","S19M P54A G146S E186V",4
"lib1","SARS-CoV-2","TGACATTTCAAACTGT",1,44.72,10.54,-0.22,0.09,2.97,1,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","TGACATTTCATAAAGG",5,127.04,10.84,0.08,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCAAAAAAATTCT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","L5S A89* K128D E154L",4
"lib1","SARS-CoV-2","TGACCAAACGCCCTAC",3,34.41,10.74,-0.02,0.06,2.98,1.03,0,">1 nonsynonymous","V37I K132R T201G",3
"lib1","SARS-CoV-2","TGACCAAAGTTTCAAT",1,11.31,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P7D W23E N64A P96M A190N",5
"lib1","SARS-CoV-2","TGACCAAATCGAATTA",12,194.66,9.87,-0.89,0.05,2.78,1.03,0,">1 nonsynonymous","G116S E141C",2
"lib1","SARS-CoV-2","TGACCAAATTGTGCAG",4,27.54,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","T63R G116S R136V Y165L",4
"lib1","SARS-CoV-2","TGACCAACAACGATAG",5,60.95,9.99,-0.77,0.05,2.94,1,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","TGACCAACAGAAAAAA",1,11.44,6.1,-4.66,0.51,1.5,1.14,0.01,">1 nonsynonymous","T3K K132P I142D",3
"lib1","SARS-CoV-2","TGACCAACTTAGTAAT",7,16.84,6,-4.76,2,1.5,1.08,0.06,">1 nonsynonymous","D34R N58W K87E G116E L131S G146Y",6
"lib1","SARS-CoV-2","TGACCAAGGAACAATA",6,42.1,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5V L38P F99M P149D",4
"lib1","SARS-CoV-2","TGACCAATATTCTTAA",3,54.24,10.21,-0.56,0.08,2.43,1.03,0,">1 nonsynonymous","D98F S184M",2
"lib1","SARS-CoV-2","TGACCAATCCGCATTC",4,0.61,NA,NA,NA,NA,NA,NA,"stop","N92* F99I",2
"lib1","SARS-CoV-2","TGACCAATGAATGCTA",4,12.25,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","C6A K48A K56V T100S I104L",5
"lib1","SARS-CoV-2","TGACCAATGCTCCGGA",10,33.44,9.2,-1.57,0.23,1.67,1.14,0.02,">1 nonsynonymous","F99A H189D",2
"lib1","SARS-CoV-2","TGACCACAAAGTAACT",3,61.65,10.43,-0.34,0.06,2.88,1,0,"1 nonsynonymous","A33N",1
"lib1","SARS-CoV-2","TGACCACATGATGACC",5,29.56,10.68,-0.08,0.04,2.99,1,0,">1 nonsynonymous","P54L N120E G152L",3
"lib1","SARS-CoV-2","TGACCACGGCCAAATT",3,60.54,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D68E N107F",2
"lib1","SARS-CoV-2","TGACCACTCAGACACT",4,73.18,9.63,-1.13,0.11,2.26,1.1,0,">1 nonsynonymous","T46A L183F",2
"lib1","SARS-CoV-2","TGACCACTCCGGTTTA",7,154.43,9.62,-1.15,0.05,2.88,1.06,0,"1 nonsynonymous","G117S",1
"lib1","SARS-CoV-2","TGACCACTTAATAATA",3,40.96,10.72,-0.04,0.05,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCAGAAATGTCCG",6,69.19,9.16,-1.6,0.17,1.5,1.13,0.01,">1 nonsynonymous","F12Q Y35K R78A",3
"lib1","SARS-CoV-2","TGACCAGATTTTACCC",1,16.19,8.76,-2,0.09,2.94,1.02,0,">1 nonsynonymous","T170V T201Q",2
"lib1","SARS-CoV-2","TGACCAGGACCAGACC",3,38.8,10.61,-0.16,0.12,2.87,1.08,0.01,"1 nonsynonymous","P54L",1
"lib1","SARS-CoV-2","TGACCAGGGAGATTCC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","E10* K56F D97I T148Y",4
"lib1","SARS-CoV-2","TGACCAGTAGTAGGCT",7,71.71,10.22,-0.54,0.07,2.88,1,0,"1 nonsynonymous","P169L",1
"lib1","SARS-CoV-2","TGACCAGTGAAACCAT",4,47.38,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","F44N N107V P133T",3
"lib1","SARS-CoV-2","TGACCAGTGCTGGGTA",4,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D75R N120R T201V",4
"lib1","SARS-CoV-2","TGACCAGTTGACCCTG",1,5.72,6,-4.76,2,1.5,1.05,0.04,">1 nonsynonymous","T55H S113M L131Q S200F",4
"lib1","SARS-CoV-2","TGACCAGTTTCTTACA",2,25.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49A V77R D90M F156I Y178S",5
"lib1","SARS-CoV-2","TGACCATAAAAAACAA",13,61.23,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C49S V71E",2
"lib1","SARS-CoV-2","TGACCATACTAGAAAT",4,121.56,10.39,-0.38,0.04,2.91,1.02,0,">1 nonsynonymous","I2S T15S F44Y S164P G174H",5
"lib1","SARS-CoV-2","TGACCATATACGATCC",2,6.09,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A42N R124L",2
"lib1","SARS-CoV-2","TGACCATCTTCTCGGT",1,39.85,10.85,0.09,0.12,2.89,1.05,0.01,"1 nonsynonymous","S200I",1
"lib1","SARS-CoV-2","TGACCATGAGTCTTTT",1,6.93,10.12,-0.65,0.11,2.72,1.27,0,">1 nonsynonymous","Y50F S53P T140K S200K",4
"lib1","SARS-CoV-2","TGACCATGGGACCGCA",5,118.47,10.66,-0.1,0.05,2.9,1.05,0,"1 nonsynonymous","D59L",1
"lib1","SARS-CoV-2","TGACCATGGGTGCTGG",5,24.62,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G51V G86K",2
"lib1","SARS-CoV-2","TGACCCAAAAGAAATA",7,108.6,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K56F G117S T170V",3
"lib1","SARS-CoV-2","TGACCCAACACCCCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L122* T140L",2
"lib1","SARS-CoV-2","TGACCCAAGTGCAATT",4,16.32,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","E10Q K114R Y123P",3
"lib1","SARS-CoV-2","TGACCCACAATTAAAA",1,51.03,7.77,-3,0.21,1.5,1.11,0.01,">1 nonsynonymous","E10L V52N Y119T",3
"lib1","SARS-CoV-2","TGACCCACGAATAATT",1,26.99,10.79,0.03,0.1,2.93,1.03,0,"1 nonsynonymous","A192S",1
"lib1","SARS-CoV-2","TGACCCACTCCTAAGG",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G L57R V173M",3
"lib1","SARS-CoV-2","TGACCCATTGTGAGCT",7,52.88,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C49M C61V E141R G174L",4
"lib1","SARS-CoV-2","TGACCCCAAACTCAGT",4,2.43,NA,NA,NA,NA,NA,NA,"stop","W23K D34S G86I D137F G152*",5
"lib1","SARS-CoV-2","TGACCCCGATAATGCA",3,21.92,10.28,-0.48,0.07,2.98,1,0,">1 nonsynonymous","A14D K56R",2
"lib1","SARS-CoV-2","TGACCCCGCAGCATCC",8,62.7,10.75,-0.02,0.04,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCCCGTGATTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* T55L A105* E141A S164L Q168K",6
"lib1","SARS-CoV-2","TGACCCCGTGGCGATT",7,119.96,9.35,-1.41,0.06,2.82,1.12,0,"1 nonsynonymous","G117Q",1
"lib1","SARS-CoV-2","TGACCCGAGAAACTTG",5,54.47,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6Y K114T C158V",3
"lib1","SARS-CoV-2","TGACCCGAGATAGATC",5,113.47,10.16,-0.61,0.06,2.74,1,0,">1 nonsynonymous","I28W P82V L187S",3
"lib1","SARS-CoV-2","TGACCCGAGGAGTTTT",2,31.56,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","N107A D137M P177A",3
"lib1","SARS-CoV-2","TGACCCGATTACACAT",2,17.09,10.31,-0.46,0.08,2.94,1,0.01,">1 nonsynonymous","P149E G166S",2
"lib1","SARS-CoV-2","TGACCCGCATCAGATA",9,34.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I104R N110F K132T E154L",4
"lib1","SARS-CoV-2","TGACCCGCCTAAAAGA",5,75.25,10.37,-0.39,0.04,2.88,1.04,0,">1 nonsynonymous","N13S T55G",2
"lib1","SARS-CoV-2","TGACCCGCCTAATGAA",1,5.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84M N118F R124S R136G",4
"lib1","SARS-CoV-2","TGACCCGGCACAGGGA",6,120.23,9.94,-0.82,0.08,2.3,1.03,0,">1 nonsynonymous","T3Y V37R E135K",3
"lib1","SARS-CoV-2","TGACCCGTACCAAATA",1,7.83,10.42,-0.34,0.05,2.98,1,0,">1 nonsynonymous","V52Y C61E",2
"lib1","SARS-CoV-2","TGACCCGTATCACCTT",4,94.15,10.75,-0.01,0.05,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCCTAAACCAGCG",7,88.57,10.73,-0.04,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCCTAGACGTCTC",4,52.54,10.63,-0.13,0.06,2.93,1,0,">1 nonsynonymous","T63P T201L",2
"lib1","SARS-CoV-2","TGACCCTGCACTAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T63* G116L",2
"lib1","SARS-CoV-2","TGACCGAAAGATACTC",1,26.66,10.65,-0.11,0.05,2.82,1.15,0,"1 nonsynonymous","S41W",1
"lib1","SARS-CoV-2","TGACCGAAAGTGGGAC",8,12.19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8K T15Y V77R F156R",4
"lib1","SARS-CoV-2","TGACCGAACTAATAAC",2,25.53,10.01,-0.75,0.09,2.8,1,0,">1 nonsynonymous","P7V D97S",2
"lib1","SARS-CoV-2","TGACCGAAGCCTAGAA",4,85.23,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D112S G146D",2
"lib1","SARS-CoV-2","TGACCGAATAAGGAAT",6,113.06,10.77,0,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCGATAAAAATAA",19,579.14,10.6,-0.16,0.03,2.88,1.04,0,">1 nonsynonymous","P7L S41N",2
"lib1","SARS-CoV-2","TGACCGATAATCAACG",8,52.31,9.3,-1.47,0.11,2.68,1.13,0,">1 nonsynonymous","S113T N120V",2
"lib1","SARS-CoV-2","TGACCGATAGCTATTA",8,80.92,10.68,-0.08,0.07,2.88,1.07,0,">1 nonsynonymous","P54L E141M",2
"lib1","SARS-CoV-2","TGACCGATCTGAGTTG",8,158.62,9.33,-1.44,0.13,1.86,1.1,0.01,">1 nonsynonymous","C61S R127K F134G S184F",4
"lib1","SARS-CoV-2","TGACCGATTACGCCTT",5,19.28,8.71,-2.06,0.29,1.58,1.2,0.02,">1 nonsynonymous","F8D R16H T85M P197V",4
"lib1","SARS-CoV-2","TGACCGCACTAAAGCA",1,27.62,9.79,-0.97,0.19,1.88,1.08,0.02,">1 nonsynonymous","C49L T201S",2
"lib1","SARS-CoV-2","TGACCGCAGAAGCGAG",10,123.76,6.35,-4.42,0.47,1.5,1.15,0.02,">1 nonsynonymous","P82D A105S K114G",3
"lib1","SARS-CoV-2","TGACCGCGTGGCTTAA",2,5.55,6.15,-4.61,2,1.5,1.11,0.03,">1 nonsynonymous","K114I F160N V182G",3
"lib1","SARS-CoV-2","TGACCGCTTAATCGCA",6,1.47,NA,NA,NA,NA,NA,NA,"stop","V37H N157* G174T",3
"lib1","SARS-CoV-2","TGACCGCTTACAAAGT",6,44.66,10.36,-0.41,0.08,2.94,1,0,"1 nonsynonymous","F156S",1
"lib1","SARS-CoV-2","TGACCGGAACAATGTG",5,23.67,9.93,-0.83,0.19,1.5,1,0.03,">1 nonsynonymous","S36Y T100N R136V",3
"lib1","SARS-CoV-2","TGACCGGCACCAATAG",4,24.86,6.07,-4.69,1.35,1.5,1.23,0.04,">1 nonsynonymous","K56E P82Y D90S T100C T170S",5
"lib1","SARS-CoV-2","TGACCGGCAGTTAGAG",5,160.88,10.71,-0.06,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCGGCCACAAATA",4,45.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T15L Y119C S147L T170R",4
"lib1","SARS-CoV-2","TGACCGGTTTTATTTT",4,75.81,10.68,-0.08,0.06,2.9,1.08,0,">1 nonsynonymous","T55K D90S",2
"lib1","SARS-CoV-2","TGACCTAACTATACCC",3,56.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G L95M N107R P133G",4
"lib1","SARS-CoV-2","TGACCTAAGACCAAAG",5,26.36,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","N4T T15D A42T T63L G83Q V103P F126N Y143E",8
"lib1","SARS-CoV-2","TGACCTACATAATAAA",10,113.81,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A18G S113K Y121S",3
"lib1","SARS-CoV-2","TGACCTAGCATAGTTA",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M I104C T140I",3
"lib1","SARS-CoV-2","TGACCTATAATTCCGA",9,72.31,10.09,-0.68,0.1,2.3,1.05,0,">1 nonsynonymous","V37G V77Q",2
"lib1","SARS-CoV-2","TGACCTATATAATCTA",1,63.79,6,-4.76,2,1.55,1.15,0,">1 nonsynonymous","D98T S139R C150L",3
"lib1","SARS-CoV-2","TGACCTCAAACTGAAG",2,46.93,9.06,-1.7,0.05,2.85,1.09,0,">1 nonsynonymous","T55A Y66T A105S Y119M",4
"lib1","SARS-CoV-2","TGACCTCAAGAAAAAT",8,110.71,10.24,-0.52,0.05,2.89,1.01,0,">1 nonsynonymous","E10G I138P S184V",3
"lib1","SARS-CoV-2","TGACCTCACAGATGAC",1,28.65,10.8,0.03,0.06,2.94,1.03,0,"1 nonsynonymous","K26M",1
"lib1","SARS-CoV-2","TGACCTCACCGCTATT",8,140.21,10.77,0,0.05,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCTCAGAGCCTAC",5,66.93,6,-4.76,1.54,1.5,1.11,0.01,">1 nonsynonymous","P96C V103L D112S Y121S G146H",5
"lib1","SARS-CoV-2","TGACCTCATGATTGCG",4,96.7,10.89,0.13,0.07,2.86,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACCTCCAAGGCGTA",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R T15H Y21M R73Y",4
"lib1","SARS-CoV-2","TGACCTCCATATAAAC",3,36.51,6,-4.76,1.78,1.5,1.14,0,">1 nonsynonymous","C6F S36R K94I Y119C",4
"lib1","SARS-CoV-2","TGACCTCGGCGCAGTG",1,6.72,9.16,-1.6,0.14,3,1.01,0.01,">1 nonsynonymous","D98F T170R",2
"lib1","SARS-CoV-2","TGACCTCTACACCAAT",10,123.49,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L95M Q144T C150W K198G",4
"lib1","SARS-CoV-2","TGACCTGAAAAATCAA",2,21.45,9.1,-1.67,0.27,1.5,1.13,0.03,">1 nonsynonymous","F17V G83W",2
"lib1","SARS-CoV-2","TGACCTGCAGAATATA",10,0.79,NA,NA,NA,NA,NA,NA,"stop","W106* E186V",2
"lib1","SARS-CoV-2","TGACCTGCCATACATA",4,19.51,10.84,0.08,0.11,2.97,1.02,0,">1 nonsynonymous","D98R P197S",2
"lib1","SARS-CoV-2","TGACCTGTTTTACCCT",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24W F44N V65F",3
"lib1","SARS-CoV-2","TGACCTTAAAACTAAA",3,80.05,9.34,-1.42,0.06,2.86,1.08,0,">1 nonsynonymous","G117S N151E",2
"lib1","SARS-CoV-2","TGACCTTAAAGGCCAT",3,108.55,10.42,-0.35,0.03,2.91,1.01,0,"1 nonsynonymous","Y123Q",1
"lib1","SARS-CoV-2","TGACCTTATTAATTGT",1,48.79,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","F99K N120S V173K",3
"lib1","SARS-CoV-2","TGACCTTCTAACGGTG",6,135.27,10.63,-0.14,0.04,2.89,1.02,0,"1 nonsynonymous","G116W",1
"lib1","SARS-CoV-2","TGACCTTGCAACCAGC",4,52.8,10.77,0,0.04,2.93,1.02,0,"1 nonsynonymous","Q144N",1
"lib1","SARS-CoV-2","TGACCTTGCAGATCCT",12,286.52,9.8,-0.96,0.08,2.53,1.04,0,">1 nonsynonymous","C6L S139G",2
"lib1","SARS-CoV-2","TGACCTTTGGGGTCCG",18,2.53,NA,NA,NA,NA,NA,NA,"stop","P133M S200*",2
"lib1","SARS-CoV-2","TGACCTTTTAATCGAT",7,93.6,10.3,-0.47,0.03,2.87,1.01,0,">1 nonsynonymous","Y39D K128T E141K",3
"lib1","SARS-CoV-2","TGACGAAATTACTACA",12,90.95,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","R25G I88G",2
"lib1","SARS-CoV-2","TGACGAACACCCCGCA",8,80.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25G T46K G117S Q144I",4
"lib1","SARS-CoV-2","TGACGAACACCCTGAG",7,43.9,7.99,-2.77,0.16,1.5,1.22,0.01,"1 nonsynonymous","F126P",1
"lib1","SARS-CoV-2","TGACGAACATAAACTA",4,3,NA,NA,NA,NA,NA,NA,"stop","A14* D75S I88A C150G G174L S200N",6
"lib1","SARS-CoV-2","TGACGAATAAGACGCG",4,1.73,NA,NA,NA,NA,NA,NA,"stop","C6* F12R V37A V77G G83V K87P W106G F160M",8
"lib1","SARS-CoV-2","TGACGAATGAACAATA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","G9V V103*",2
"lib1","SARS-CoV-2","TGACGAATTACATTAC",5,44,10.86,0.09,0.06,2.97,1.01,0,">1 nonsynonymous","V37W F44M L122M",3
"lib1","SARS-CoV-2","TGACGACAGAAACGAT",3,44.16,6,-4.76,2,1.5,1.16,0.02,"1 nonsynonymous","F167S",1
"lib1","SARS-CoV-2","TGACGACATAATATCT",2,0.18,NA,NA,NA,NA,NA,NA,"stop","S29L C49G D98K K114G F126Y Y159* Y178H",7
"lib1","SARS-CoV-2","TGACGACCAATGGCTT",4,17.59,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","R16G V32M D68G P82K D97C S113E L122A N151L",8
"lib1","SARS-CoV-2","TGACGACCCGAGACTA",1,66.51,9.79,-0.97,0.1,2.72,1.07,0,">1 nonsynonymous","D90Y F156M",2
"lib1","SARS-CoV-2","TGACGACCGAATTGAT",10,0.44,NA,NA,NA,NA,NA,NA,"stop","R136K Q176*",2
"lib1","SARS-CoV-2","TGACGACGGCCGTAGA",1,6.68,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6T F12K C49H N92I Y165F",5
"lib1","SARS-CoV-2","TGACGACTTAACCGCT",2,14.31,8.04,-2.73,0.36,1.5,1,0.04,">1 nonsynonymous","T3V A89P F99L T148A",4
"lib1","SARS-CoV-2","TGACGACTTACGTTAA",6,84.12,10.24,-0.52,0.02,2.88,1.07,0,">1 nonsynonymous","N4T Y121I A190D",3
"lib1","SARS-CoV-2","TGACGAGGATATACAG",1,31.74,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","V11K L131W",2
"lib1","SARS-CoV-2","TGACGAGTACAAATTG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TGACGATAAAAAGAAA",2,18.19,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","I80N A105G N120A G155Q",4
"lib1","SARS-CoV-2","TGACGATATCCGTACG",1,1.11,NA,NA,NA,NA,NA,NA,"stop","N40* G146* G155C",3
"lib1","SARS-CoV-2","TGACGATCTGATTAAA",1,20.66,6.23,-4.53,0.35,1.8,1.06,0.01,"1 nonsynonymous","I88W",1
"lib1","SARS-CoV-2","TGACGATGCACTTTGC",3,41.84,6.07,-4.69,1.58,1.5,1.26,0.07,">1 nonsynonymous","S36H Y165T G172A T201I",4
"lib1","SARS-CoV-2","TGACGATGTAAAGTAA",3,26.7,7.91,-2.86,0.32,1.5,1.2,0.03,">1 nonsynonymous","V153H P177G T201R",3
"lib1","SARS-CoV-2","TGACGATTGAAGACCA",3,9.44,8.68,-2.08,0.21,2.59,1,0.01,">1 nonsynonymous","P133S N157E",2
"lib1","SARS-CoV-2","TGACGATTTGCACCCG",6,76.56,10.65,-0.11,0.08,2.88,1.07,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","TGACGCAAAACAAAAC",6,7.49,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","V11H S41L F62V A81N P96F K114F R127L L183K",8
"lib1","SARS-CoV-2","TGACGCAAAGCCGTTT",2,27.32,6.02,-4.74,1.6,1.5,1.2,0.06,">1 nonsynonymous","T63Q I80G G83V",3
"lib1","SARS-CoV-2","TGACGCAACAAAAAAG",2,94.24,10.64,-0.12,0.07,2.87,1.02,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","TGACGCAAGATTATCC",8,182.26,9.2,-1.57,0.06,2.77,1.1,0,">1 nonsynonymous","D98S Y119L T201F",3
"lib1","SARS-CoV-2","TGACGCAAGTTGTAAG",3,28.6,10.65,-0.12,0.03,2.93,1.05,0,">1 nonsynonymous","V37Y K114E",2
"lib1","SARS-CoV-2","TGACGCAGAACAAACT",2,32.23,10.71,-0.05,0.03,2.93,1.04,0,">1 nonsynonymous","V37G K199D",2
"lib1","SARS-CoV-2","TGACGCCATCCTGATT",7,106.85,7.8,-2.97,0.19,1.5,1.14,0.01,">1 nonsynonymous","S41R G51T S113T",3
"lib1","SARS-CoV-2","TGACGCGCAAACATAT",3,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S N120K",2
"lib1","SARS-CoV-2","TGACGCGGATACTTAG",1,3.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","TGACGCGGCAGGCAGC",1,97.53,10.73,-0.03,0.08,2.89,1.07,0,"1 nonsynonymous","I72L",1
"lib1","SARS-CoV-2","TGACGCGTAATTCAGT",4,0.69,NA,NA,NA,NA,NA,NA,"stop","I88* N118Y N151*",3
"lib1","SARS-CoV-2","TGACGCTAAACAGTTT",2,50.2,10.24,-0.53,0.06,2.81,1.07,0,">1 nonsynonymous","I28V L60N",2
"lib1","SARS-CoV-2","TGACGCTACGTCTCAA",2,34.92,10.31,-0.45,0.08,2.94,1.04,0,">1 nonsynonymous","P7T T55C C61N T201M",4
"lib1","SARS-CoV-2","TGACGCTAGCCACAGG",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A P96Q I142L",3
"lib1","SARS-CoV-2","TGACGCTATACAGGGT",2,27.6,10.33,-0.44,0.06,2.93,1,0,">1 nonsynonymous","L5E Y39D P149V",3
"lib1","SARS-CoV-2","TGACGCTCCTGCCAAA",1,29.25,9.85,-0.92,0.11,1.96,1.08,0.01,">1 nonsynonymous","N24D P96V",2
"lib1","SARS-CoV-2","TGACGCTTTACTTTGA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","E10G V103N Q168*",3
"lib1","SARS-CoV-2","TGACGCTTTCACTGGA",1,6.28,7.35,-3.41,1.22,3,1.1,0.01,">1 nonsynonymous","C49R L183F",2
"lib1","SARS-CoV-2","TGACGGAAGACTATAC",3,25.39,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S19P L38V D98K E154H P161S",5
"lib1","SARS-CoV-2","TGACGGAATATGTGCC",3,119.41,10.43,-0.33,0.03,2.91,1,0,">1 nonsynonymous","S41K N64T L122K Q176M",4
"lib1","SARS-CoV-2","TGACGGAATGAAGTTA",3,7.56,6,-4.76,2,3,1.1,0.03,">1 nonsynonymous","R73W V103M W106T",3
"lib1","SARS-CoV-2","TGACGGAATTTGTCAA",9,0.46,NA,NA,NA,NA,NA,NA,"stop","Y35R G86* G101F S129I I138N Y143V F160V",7
"lib1","SARS-CoV-2","TGACGGACATAAATAG",1,29.72,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A18Q F70S V77Y D98E R136D",5
"lib1","SARS-CoV-2","TGACGGAGAGAAGCAG",2,31.03,8.92,-1.84,0.09,2.85,1.11,0,">1 nonsynonymous","V52P Y119F V173E",3
"lib1","SARS-CoV-2","TGACGGAGATCTCATT",7,100.96,9.26,-1.51,0.11,1.83,1.11,0.01,">1 nonsynonymous","Y21Q I28L F62S D98N P191V",5
"lib1","SARS-CoV-2","TGACGGAGTTATCGAT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","Y39* K56S T100A",3
"lib1","SARS-CoV-2","TGACGGAGTTCTAAGT",2,91.96,10.32,-0.44,0.05,2.93,1,0,">1 nonsynonymous","F62I F156V",2
"lib1","SARS-CoV-2","TGACGGCAGGCCGACG",3,70.93,9.11,-1.65,0.09,1.91,1.07,0,">1 nonsynonymous","N30Y C61L G155F",3
"lib1","SARS-CoV-2","TGACGGCTACGAAAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","D97* P161I",2
"lib1","SARS-CoV-2","TGACGGGAGTACACTA",6,36.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15I V103L",2
"lib1","SARS-CoV-2","TGACGGGAGTCCTAAA",4,21.85,6.28,-4.49,1,1.5,1.23,0.06,">1 nonsynonymous","T55V D68M E141F",3
"lib1","SARS-CoV-2","TGACGGGATGAAAAGA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","K94L Y119* I142L",3
"lib1","SARS-CoV-2","TGACGGGGATGTAATA",2,71.99,10.39,-0.38,0.05,2.97,1.02,0,">1 nonsynonymous","R16N A18V L122E",3
"lib1","SARS-CoV-2","TGACGGTATATGTAAT",2,116.41,8.51,-2.25,0.1,2.47,1.11,0,">1 nonsynonymous","A42T T85F G117I",3
"lib1","SARS-CoV-2","TGACGGTGTCAAGCAT",10,27.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D98A A105R P149T",3
"lib1","SARS-CoV-2","TGACGGTTAAATCTAG",7,138.46,10.16,-0.61,0.04,2.87,1.02,0,"1 nonsynonymous","G155V",1
"lib1","SARS-CoV-2","TGACGGTTTCAACTAC",4,39.23,9.72,-1.04,0.1,1.8,1.05,0,">1 nonsynonymous","K26W G51S",2
"lib1","SARS-CoV-2","TGACGTAACCTCTAGT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","S53V K87Y G101D V153P S200*",5
"lib1","SARS-CoV-2","TGACGTAAGAAGCAAT",6,82.44,9.93,-0.84,0.05,2.92,1.02,0,"1 nonsynonymous","T170Y",1
"lib1","SARS-CoV-2","TGACGTAATCATGACA",3,26.15,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S45I D59L G83H A89T V103T S129H",6
"lib1","SARS-CoV-2","TGACGTACAGACACAA",3,31.49,7.15,-3.61,0.21,1.5,1.11,0.01,">1 nonsynonymous","G9V T15S W23M F160D",4
"lib1","SARS-CoV-2","TGACGTACAGATCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N24H A81F L95A S108V R124* L162F",6
"lib1","SARS-CoV-2","TGACGTAGACAACCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","W23K A42T T46N D90A G117* R127H G166E S184W",8
"lib1","SARS-CoV-2","TGACGTAGGGCCATAA",1,2.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","TGACGTATAATGGAGG",1,30,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2F V11G D90R A105F D112Q N130S",6
"lib1","SARS-CoV-2","TGACGTCAATTCACCC",3,141.57,9.89,-0.87,0.06,2.55,1.03,0,">1 nonsynonymous","V37D T46M N107C",3
"lib1","SARS-CoV-2","TGACGTCACGAGTAAT",4,70.01,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G51I T85Y D97L N107D Y143I T170N",6
"lib1","SARS-CoV-2","TGACGTCCAAGCATAT",3,20.63,8.5,-2.26,0.3,1.5,1,0.03,">1 nonsynonymous","F12L F44I D90I L122R E154M",5
"lib1","SARS-CoV-2","TGACGTCCAGACCTCC",2,32.1,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S113K P161G Y175V",3
"lib1","SARS-CoV-2","TGACGTGAGCAGTCGC",3,37.85,9.39,-1.38,0.2,1.63,1.15,0.01,">1 nonsynonymous","T3S Y66G",2
"lib1","SARS-CoV-2","TGACGTGAGCTAACCG",4,20.83,10.65,-0.11,0.07,2.85,1.16,0,">1 nonsynonymous","Y39R K198E",2
"lib1","SARS-CoV-2","TGACGTTAACAGACGA",7,71,6,-4.76,1.65,1.5,1.21,0.02,">1 nonsynonymous","I80P L95S",2
"lib1","SARS-CoV-2","TGACGTTATGTGGGAC",5,175.86,10.62,-0.15,0.04,2.93,1.02,0,">1 nonsynonymous","G83L T148N",2
"lib1","SARS-CoV-2","TGACGTTATTAATTAG",3,1.87,NA,NA,NA,NA,NA,NA,"stop","Q84T N110T D137* Q144T",4
"lib1","SARS-CoV-2","TGACGTTCATCTCTAA",3,107.86,10.47,-0.3,0.04,2.89,1.01,0,">1 nonsynonymous","P96S K114T",2
"lib1","SARS-CoV-2","TGACTAAAACCGCATA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I P96M A105M S113L L122G G146T K198W",7
"lib1","SARS-CoV-2","TGACTAAAACCTAACG",9,55.53,6.84,-3.92,0.31,1.5,1.15,0.01,">1 nonsynonymous","S108F P149S",2
"lib1","SARS-CoV-2","TGACTAAAACGCTTCC",2,16.34,6.41,-4.36,0.55,1.5,1.25,0.03,">1 nonsynonymous","G117L Q163P",2
"lib1","SARS-CoV-2","TGACTAAAAGCAACCC",7,3.22,NA,NA,NA,NA,NA,NA,"stop","F17* P82W D90I Y165W",4
"lib1","SARS-CoV-2","TGACTAAAATGAAAAT",7,0.67,NA,NA,NA,NA,NA,NA,"stop","S41N N118E T201*",3
"lib1","SARS-CoV-2","TGACTAAACAACCCCA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","F12R Y39H T85* Y178R",4
"lib1","SARS-CoV-2","TGACTAAACACATGAA",1,15.24,6,-4.76,2,3,1.19,0.01,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","TGACTAAACTACACAC",2,7.62,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","K87M N107T K114G Y119R V173N T201Y",6
"lib1","SARS-CoV-2","TGACTAAACTAGGCGT",3,90.45,9.85,-0.91,0.08,2.27,1.09,0,">1 nonsynonymous","L60N R78M F134R",3
"lib1","SARS-CoV-2","TGACTAAATTGAGGAT",2,26.38,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","F12K L57H D90W",3
"lib1","SARS-CoV-2","TGACTAACACAGCCAA",4,0.4,NA,NA,NA,NA,NA,NA,"stop","Y50* N130V",2
"lib1","SARS-CoV-2","TGACTAACATAAACTA",6,76.18,10.33,-0.44,0.04,2.89,1.03,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TGACTAACCAAGCGAT",2,39.44,10.81,0.04,0.07,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACTAACGAAGACTT",2,9.45,6,-4.76,1.26,3,1.16,0.01,">1 nonsynonymous","Y50S N157H A190P",3
"lib1","SARS-CoV-2","TGACTAACGCGTGCCT",2,28.18,10.78,0.02,0.08,2.95,1.04,0,"1 nonsynonymous","K132N",1
"lib1","SARS-CoV-2","TGACTAACTAGAAAAC",13,224.04,9.63,-1.14,0.03,2.84,1.06,0,">1 nonsynonymous","T55S C61N G74K",3
"lib1","SARS-CoV-2","TGACTAATAATTTCAT",4,55.96,9.5,-1.26,0.05,2.91,1.08,0,">1 nonsynonymous","I28M Y119M I138V",3
"lib1","SARS-CoV-2","TGACTACAACGGCCTA",3,14.75,6.41,-4.35,0.97,1.5,1.11,0.07,">1 nonsynonymous","T15A I88W K94F V103L",4
"lib1","SARS-CoV-2","TGACTACAGCCCCAAG",7,1.32,NA,NA,NA,NA,NA,NA,"stop","G9* Y119L P133S",3
"lib1","SARS-CoV-2","TGACTACATAATAGAA",2,10.25,10.87,0.11,0.14,2.87,1,0.01,"1 nonsynonymous","A81Q",1
"lib1","SARS-CoV-2","TGACTACATTGTCAAA",6,141.11,10.73,-0.04,0.07,2.86,1.05,0,">1 nonsynonymous","D90H L122R",2
"lib1","SARS-CoV-2","TGACTACATTTAAAAC",1,21.66,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","S43Q Y93G K199N",3
"lib1","SARS-CoV-2","TGACTACCTCATAAAG",7,26.6,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P82Y A89S D112E G146D G152F",5
"lib1","SARS-CoV-2","TGACTACCTGATACAT",6,105.9,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","E10L Y35A G74R I88R R136P",5
"lib1","SARS-CoV-2","TGACTACGTAAACAAT",3,0.76,NA,NA,NA,NA,NA,NA,"stop","A14G K56* Y119I K132N",4
"lib1","SARS-CoV-2","TGACTAGAACTACTCG",3,55.51,10.01,-0.75,0.09,2.69,1,0,">1 nonsynonymous","T63E P96D E186T",3
"lib1","SARS-CoV-2","TGACTAGCTCATAGGT",1,12.84,6,-4.76,0.42,3,1.06,0,">1 nonsynonymous","Y93E Y121G Y143K",3
"lib1","SARS-CoV-2","TGACTAGTACAAAAGT",3,70.68,9.3,-1.47,0.08,2.55,1.07,0,">1 nonsynonymous","L5Q S29H Y121F Q144Y",4
"lib1","SARS-CoV-2","TGACTAGTCCCCCTAT",1,39.18,6,-4.76,1.36,1.5,1.17,0.02,">1 nonsynonymous","G86F V115L R127L",3
"lib1","SARS-CoV-2","TGACTATAACATTAGT",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R S53W A145T",3
"lib1","SARS-CoV-2","TGACTATACACAAAAT",5,53.67,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D59T L95T C158V",3
"lib1","SARS-CoV-2","TGACTATGTATTCTGA",1,9.64,10.59,-0.18,0.09,2.92,1,0,"1 nonsynonymous","D98W",1
"lib1","SARS-CoV-2","TGACTATTATACTAGA",4,76.22,9.7,-1.07,0.1,2.59,1.08,0,">1 nonsynonymous","A105S N107K",2
"lib1","SARS-CoV-2","TGACTATTGCGATGCC",3,35.47,9.7,-1.06,0.14,1.89,1.13,0.01,">1 nonsynonymous","F17T K114R",2
"lib1","SARS-CoV-2","TGACTATTTTTCAGGC",4,3.96,NA,NA,NA,NA,NA,NA,"stop","V71* T100L",2
"lib1","SARS-CoV-2","TGACTCAAACAAATAT",6,110.25,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27G A33V P177L",3
"lib1","SARS-CoV-2","TGACTCAACATGTACC",2,4.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","TGACTCAACTGATCTA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","TGACTCAAGGCGCTAT",4,31.64,7.17,-3.6,0.38,1.5,1.02,0.07,">1 nonsynonymous","R27C L38G E76V K94E N107H",5
"lib1","SARS-CoV-2","TGACTCACAACCCTTA",1,42.36,10.07,-0.69,0.05,2.89,1,0,"1 nonsynonymous","G146N",1
"lib1","SARS-CoV-2","TGACTCACTTACACAT",2,30.08,7,-3.76,0.26,1.5,1.1,0.01,">1 nonsynonymous","F17C S41L K87M S139D",4
"lib1","SARS-CoV-2","TGACTCACTTTGACAT",2,13.85,6,-4.76,1.57,3,1.23,0.01,">1 nonsynonymous","N13S G86R N171Y",3
"lib1","SARS-CoV-2","TGACTCAGAACTAATG",4,18.73,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","Y50R V77M F126Q",3
"lib1","SARS-CoV-2","TGACTCAGATGAAGCT",2,18.95,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","D98M S113V Y121E",3
"lib1","SARS-CoV-2","TGACTCAGTACATGTT",4,35.39,10.95,0.19,0.09,2.87,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACTCATAGAGCATG",7,26.43,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C6V G83P V115Y P161D",4
"lib1","SARS-CoV-2","TGACTCATCACAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44R T63D N120S E154N P169H T201*",6
"lib1","SARS-CoV-2","TGACTCATGAATTCCA",18,310.17,10.69,-0.07,0.05,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACTCATGACAAAAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","N1* V173T",2
"lib1","SARS-CoV-2","TGACTCCAACTTCCAG",4,58.92,6.9,-3.86,0.52,1.5,1.09,0.06,"1 nonsynonymous","R179F",1
"lib1","SARS-CoV-2","TGACTCCGATTACGCT",2,136.8,10.65,-0.11,0.05,2.87,1.07,0,"1 nonsynonymous","T85F",1
"lib1","SARS-CoV-2","TGACTCCGGGCGCCGC",2,64.75,10.02,-0.75,0.04,2.91,1.01,0,">1 nonsynonymous","L5R D98V L125W",3
"lib1","SARS-CoV-2","TGACTCCTATGCCATT",4,58.1,8.31,-2.45,0.23,1.5,1.17,0.02,">1 nonsynonymous","V11R C61M K128T Y175F",4
"lib1","SARS-CoV-2","TGACTCCTTCGTTCCT",4,99.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8A V37F V52L T55K C102W",5
"lib1","SARS-CoV-2","TGACTCGATCAAAATT",6,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127S I142G",2
"lib1","SARS-CoV-2","TGACTCGCCATATTAA",1,21.5,10.82,0.06,0.09,2.94,1,0,"1 nonsynonymous","I138R",1
"lib1","SARS-CoV-2","TGACTCGCCTCCACAT",11,88.9,8.7,-2.06,0.13,1.74,1.14,0.01,">1 nonsynonymous","Y91C G116M T148Y",3
"lib1","SARS-CoV-2","TGACTCGTTCTACTCG",2,76.89,10.79,0.03,0.05,2.91,1.06,0,"1 nonsynonymous","Y39T",1
"lib1","SARS-CoV-2","TGACTCTATAGGGAGC",3,24.85,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","Y50P Y91M R127N V173Y T201L",5
"lib1","SARS-CoV-2","TGACTCTCCTGTCCAC",4,72.48,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","K56R K87R L95V S113E Y119E Y178D",6
"lib1","SARS-CoV-2","TGACTCTTAAACAACA",5,7.46,6.59,-4.17,0.62,3,1.11,0.01,">1 nonsynonymous","N13I D90H F134T I142E Y165K",5
"lib1","SARS-CoV-2","TGACTCTTTAACTTGA",4,12.56,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S19Q F99R",2
"lib1","SARS-CoV-2","TGACTGAACATGAAAA",2,7.41,8.79,-1.98,0.26,3,1.08,0.02,">1 nonsynonymous","N64R F126Y",2
"lib1","SARS-CoV-2","TGACTGAATAGTACAT",2,28.83,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10Y T15C N107S R136K G166S",5
"lib1","SARS-CoV-2","TGACTGAGTGTACTCA",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69Y G74Q N107M F126I",4
"lib1","SARS-CoV-2","TGACTGATACATATAT",1,74.37,10.08,-0.69,0.08,2.58,1.05,0,">1 nonsynonymous","C31L V37N C61E",3
"lib1","SARS-CoV-2","TGACTGCAGATACCTA",3,117.34,10.47,-0.3,0.04,2.88,1.04,0,">1 nonsynonymous","A42L N109K L183I",3
"lib1","SARS-CoV-2","TGACTGCCACTTCCCA",3,56.37,10.11,-0.66,0.06,2.75,1.03,0,">1 nonsynonymous","N24M P149F",2
"lib1","SARS-CoV-2","TGACTGCCATTAGAAG",4,129.55,10.69,-0.07,0.05,2.93,1.05,0,">1 nonsynonymous","N40D T100L K132G",3
"lib1","SARS-CoV-2","TGACTGCCCTCAAGAA",5,207.51,10.59,-0.17,0.03,2.87,1.04,0,">1 nonsynonymous","N64T D98Y",2
"lib1","SARS-CoV-2","TGACTGCGGGAGCGGC",1,16.32,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y35Q I72N",2
"lib1","SARS-CoV-2","TGACTGCGTTGTCCAC",6,43.55,6,-4.76,2,3,1.23,0,">1 nonsynonymous","D137R Q168N T201K",3
"lib1","SARS-CoV-2","TGACTGCTGAATACAT",2,33.5,6.98,-3.78,0.37,1.5,1.02,0.04,">1 nonsynonymous","L5R S45Y W106R Y119S",4
"lib1","SARS-CoV-2","TGACTGGAAAGTTTTA",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I E141T",2
"lib1","SARS-CoV-2","TGACTGGAGCAAGTCC",3,32.12,6,-4.76,1.11,3,1.08,0.01,">1 nonsynonymous","F44D G117W Y165S",3
"lib1","SARS-CoV-2","TGACTGGAGTATAAAA",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M D68K S113T Y143D P149V",5
"lib1","SARS-CoV-2","TGACTGGCATATGAAA",7,66.79,6.5,-4.26,0.2,1.56,1.15,0,">1 nonsynonymous","C31M F126V Q163D",3
"lib1","SARS-CoV-2","TGACTGTAAGAATGAC",1,47.13,10.39,-0.37,0.05,2.77,1.07,0,">1 nonsynonymous","R16V Y91N N120A",3
"lib1","SARS-CoV-2","TGACTGTAGTAAAATA",4,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47G P133S L162R",3
"lib1","SARS-CoV-2","TGACTGTATTTACTTA",2,18.63,10.23,-0.53,0.03,2.99,1,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","TGACTGTTCATTTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* K56S V77L R179G",4
"lib1","SARS-CoV-2","TGACTTAAAGGAGCAA",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77F A89V V103S G174L",4
"lib1","SARS-CoV-2","TGACTTAAGTATTACT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","P54* A89T D98L K114E K128Y",5
"lib1","SARS-CoV-2","TGACTTACGCGGGAGC",5,27.02,6,-4.76,0.65,3,1.05,0,">1 nonsynonymous","S53N V77Q K128T F134K T170E",5
"lib1","SARS-CoV-2","TGACTTACTATAAAGA",2,14.49,10.87,0.11,0.11,2.74,1.11,0,"1 nonsynonymous","L60A",1
"lib1","SARS-CoV-2","TGACTTACTCTGAACT",1,85.49,9.56,-1.21,0.05,2.81,1.07,0,">1 nonsynonymous","S41T K87R E135D G155E",4
"lib1","SARS-CoV-2","TGACTTAGCTTCAATA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","F44R I142* T148P Y159S",4
"lib1","SARS-CoV-2","TGACTTAGTGGTGTGT",9,114.22,9.34,-1.43,0.07,2.81,1.12,0,">1 nonsynonymous","V77L Y119F E141G",3
"lib1","SARS-CoV-2","TGACTTATTAATTTTA",1,6.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R27M R179Q",2
"lib1","SARS-CoV-2","TGACTTCCAAACCAAT",8,42.33,9.65,-1.11,0.18,1.64,1.12,0.01,">1 nonsynonymous","L122P K198A",2
"lib1","SARS-CoV-2","TGACTTCCAATTAAAC",3,41.69,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9C L57G D90S G101L",4
"lib1","SARS-CoV-2","TGACTTCGACAGAATG",2,47.05,10.73,-0.03,0.05,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGACTTCTAAATAAAA",1,46.61,9.79,-0.98,0.07,2.86,1.05,0,">1 nonsynonymous","G74S V153E",2
"lib1","SARS-CoV-2","TGACTTCTACACCCCG",7,133.91,10.67,-0.1,0.06,2.87,1.04,0,">1 nonsynonymous","F62Y V77L E141S",3
"lib1","SARS-CoV-2","TGACTTCTAGTATACG",4,108.46,10.77,0,0.05,2.94,1.03,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","TGACTTGAACATTAAG",7,1.75,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGACTTGAATACAAGG",4,25.58,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","R16K Y35S I104K",3
"lib1","SARS-CoV-2","TGACTTGACTAATGCT",2,0.76,NA,NA,NA,NA,NA,NA,"stop","N58P N110* V115*",3
"lib1","SARS-CoV-2","TGACTTGCCCAAAGAC",4,42.48,8.61,-2.15,0.15,2.6,1.09,0.01,">1 nonsynonymous","S29N S113H H189Q",3
"lib1","SARS-CoV-2","TGACTTGCTCTATGAC",1,22.63,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","A105N R179D",2
"lib1","SARS-CoV-2","TGACTTGCTGATGAGT",5,73.01,10.69,-0.08,0.06,2.91,1.04,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","TGACTTGGAATTCCAC",2,0.08,NA,NA,NA,NA,NA,NA,"stop","S43F D90A R127C N151K Y178P S184*",6
"lib1","SARS-CoV-2","TGACTTGGTGGGATTA",8,42.2,6.77,-3.99,0.36,1.5,1.16,0.02,">1 nonsynonymous","I2C W23M S45I F99C",4
"lib1","SARS-CoV-2","TGACTTGTCTTGCAAG",4,31.97,9.6,-1.16,0.16,1.98,1.11,0.01,">1 nonsynonymous","N4S W106M E141L",3
"lib1","SARS-CoV-2","TGACTTGTGATCTAAT",4,163.44,10.25,-0.52,0.06,2.81,1.01,0,">1 nonsynonymous","F167Y A192P",2
"lib1","SARS-CoV-2","TGACTTGTTATGAACA",8,83.68,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68A A81C",2
"lib1","SARS-CoV-2","TGACTTTAACAATCAT",2,52.83,6,-4.76,2,3,1.22,0,">1 nonsynonymous","A22M F167G",2
"lib1","SARS-CoV-2","TGACTTTCAGCAGTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","I2* G9R P82R",3
"lib1","SARS-CoV-2","TGACTTTCTATGATCT",1,28.93,10.48,-0.28,0.26,1.78,1.11,0.03,">1 nonsynonymous","F12K Q84K",2
"lib1","SARS-CoV-2","TGACTTTGATAGGAAT",1,53.38,10.54,-0.23,0.05,2.89,1.04,0,">1 nonsynonymous","T85E K114T",2
"lib1","SARS-CoV-2","TGACTTTTCACAATCC",1,7.65,7.18,-3.58,0.69,1.5,1.17,0.06,">1 nonsynonymous","S41D N58L L95P N120R S139H",5
"lib1","SARS-CoV-2","TGACTTTTTCTTGATA",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H G83I T201V",3
"lib1","SARS-CoV-2","TGAGAAAAAATATTAC",2,6.88,10.65,-0.12,0.13,2.76,1.16,0.01,"1 nonsynonymous","S36Y",1
"lib1","SARS-CoV-2","TGAGAAAAAGCTTACG",6,96.04,10.7,-0.07,0.05,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGAAAAATTCCGTG",2,27.66,9.19,-1.58,0.24,1.75,1.17,0.03,">1 nonsynonymous","F12L G51T",2
"lib1","SARS-CoV-2","TGAGAAAACTAATATG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14C R27S C49*",3
"lib1","SARS-CoV-2","TGAGAAAAGGAAATAC",11,72.32,7.9,-2.86,0.18,1.54,1.15,0.01,">1 nonsynonymous","L5T A14E D34C N107K",4
"lib1","SARS-CoV-2","TGAGAAACATGAATAG",3,27.06,7.77,-2.99,0.34,1.5,1.13,0.04,">1 nonsynonymous","Y21S G152C",2
"lib1","SARS-CoV-2","TGAGAAAGATTAATTT",1,2.43,NA,NA,NA,NA,NA,NA,"stop","I104* V180R",2
"lib1","SARS-CoV-2","TGAGAAAGCACGGAAC",3,48.49,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5S Y35V F134S T148D N157C S200Y",6
"lib1","SARS-CoV-2","TGAGAAAGCCGCTCAG",4,58.89,10.74,-0.02,0.07,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGAAATAACGTTTA",4,15.84,7.27,-3.49,0.59,1.5,1.11,0.07,">1 nonsynonymous","A14L I104S Y175S",3
"lib1","SARS-CoV-2","TGAGAAATCCTGGTGT",7,130.67,10.5,-0.27,0.05,2.92,1.02,0,">1 nonsynonymous","N4W R16D V37S",3
"lib1","SARS-CoV-2","TGAGAAATTATGTTAA",1,38.89,10.71,-0.06,0.09,2.95,1.06,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TGAGAACACAGCTAAC",2,32.45,9.17,-1.6,0.23,1.5,1.05,0.02,">1 nonsynonymous","L57G V173S",2
"lib1","SARS-CoV-2","TGAGAACAGTAAAAAC",4,1.47,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TGAGAACATATTCAAG",11,9.82,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","D34N A42L C150Y P161W",4
"lib1","SARS-CoV-2","TGAGAACCAACATCAC",6,27.13,6,-4.76,2,1.5,1.4,0.03,">1 nonsynonymous","Y93P L162M",2
"lib1","SARS-CoV-2","TGAGAACCGCCCCTAC",5,0.68,NA,NA,NA,NA,NA,NA,"stop","A33L N120*",2
"lib1","SARS-CoV-2","TGAGAACTCCAAAAGC",4,85.13,6,-4.76,1.3,3,1.12,0,">1 nonsynonymous","N157K T170L",2
"lib1","SARS-CoV-2","TGAGAAGAACACAAAC",1,15.1,10.93,0.17,0.09,2.97,1,0,">1 nonsynonymous","I28F E141F",2
"lib1","SARS-CoV-2","TGAGAAGACCAAGACC",5,33.02,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F99N E141W",2
"lib1","SARS-CoV-2","TGAGAAGTACTATTAA",5,118.53,8.45,-2.31,0.17,2.86,1.06,0.01,">1 nonsynonymous","F8Y F126S",2
"lib1","SARS-CoV-2","TGAGAAGTCGGGGATT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","D97V Y143* G166M",3
"lib1","SARS-CoV-2","TGAGAATACGATTAGT",1,25.38,9.66,-1.1,0.06,2.9,1.01,0,">1 nonsynonymous","S43H A145F",2
"lib1","SARS-CoV-2","TGAGAATACTAATCAG",7,127.28,10.41,-0.35,0.03,2.88,1.04,0,">1 nonsynonymous","A42D A89C",2
"lib1","SARS-CoV-2","TGAGAATATAATGTTA",1,7.68,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N64P V77L Y91Q D98R",4
"lib1","SARS-CoV-2","TGAGAATCAATGCTAG",7,48.01,6.68,-4.08,0.44,1.5,1.19,0.03,">1 nonsynonymous","A81N V103G R136N G146L N157T",5
"lib1","SARS-CoV-2","TGAGAATCCCAAGAAC",3,31.12,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V52S P96C I142L",3
"lib1","SARS-CoV-2","TGAGAATCTAATGAAA",1,10.29,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L38Y A89E E154V P197S K199M",5
"lib1","SARS-CoV-2","TGAGAATCTATCATGA",23,626.4,10.59,-0.17,0.03,2.93,1.03,0,">1 nonsynonymous","I2L V11L",2
"lib1","SARS-CoV-2","TGAGAATGCGATCTGA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","P7* K132A",2
"lib1","SARS-CoV-2","TGAGAATGCTATAAGT",9,51.25,6.97,-3.8,0.25,1.5,1.15,0.01,">1 nonsynonymous","R27L T55N Q79K A89M",4
"lib1","SARS-CoV-2","TGAGAATGCTTTCAAA",5,81.01,7.9,-2.87,0.19,1.54,1.19,0.01,">1 nonsynonymous","F47A T170P",2
"lib1","SARS-CoV-2","TGAGAATGGGATCCTA",2,13.33,10.48,-0.29,0.14,2.64,1.17,0.01,">1 nonsynonymous","V37R S184A S200Q",3
"lib1","SARS-CoV-2","TGAGAATGTTTTCTGA",2,10.66,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N4S S69K P82S A105D S139M T201H",6
"lib1","SARS-CoV-2","TGAGAATTAACCTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A18G G83* G117*",3
"lib1","SARS-CoV-2","TGAGAATTATTCTACA",1,8.29,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V37N D68S Y119L",3
"lib1","SARS-CoV-2","TGAGAATTTAAATTGT",1,19.45,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","A42I Q144T C158S P169A",4
"lib1","SARS-CoV-2","TGAGACAACGTGGCGA",1,40.69,10.79,0.03,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGACAAGAAGCTGA",4,205.54,8.47,-2.29,0.08,2.68,1.09,0,">1 nonsynonymous","S41L K87M G146R",3
"lib1","SARS-CoV-2","TGAGACAATCTGAGTA",6,56.68,8.56,-2.21,0.25,1.5,1.16,0.02,">1 nonsynonymous","G9R F47K Q163W",3
"lib1","SARS-CoV-2","TGAGACACACAGAGAA",10,164.97,10.64,-0.12,0.06,2.89,1.07,0,">1 nonsynonymous","A22Q S36V",2
"lib1","SARS-CoV-2","TGAGACAGCGACAAAA",3,16.93,10.35,-0.41,0.12,2.91,1,0.01,">1 nonsynonymous","C6S Y39L",2
"lib1","SARS-CoV-2","TGAGACAGGATAGTAG",11,63.55,6.19,-4.57,0.67,1.5,1.17,0.02,">1 nonsynonymous","T55C I104V S113L",3
"lib1","SARS-CoV-2","TGAGACAGGCGCAAGG",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T I88G",2
"lib1","SARS-CoV-2","TGAGACATCTCATTAG",2,13.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A22K P82L L125G Y165T T201S",5
"lib1","SARS-CoV-2","TGAGACATCTTCTTCA",4,86.95,10.81,0.04,0.07,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAGACATGTCAGTGT",2,21.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V A42F F47W S69T N151I N157D",6
"lib1","SARS-CoV-2","TGAGACCAAAATACCA",8,40.22,6,-4.76,1.31,1.5,1.16,0.02,">1 nonsynonymous","S19W K48C P54D",3
"lib1","SARS-CoV-2","TGAGACCAATCAAATG",5,392.9,10.73,-0.03,0.05,2.91,1.05,0,">1 nonsynonymous","I2S I104F",2
"lib1","SARS-CoV-2","TGAGACCACAAAAATA",5,19.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L57P D90L L131G",3
"lib1","SARS-CoV-2","TGAGACCCCTCGTCTC",1,49.72,9.9,-0.87,0.11,2.16,1.07,0,">1 nonsynonymous","T3S F17L",2
"lib1","SARS-CoV-2","TGAGACCCGTCGTAAA",6,75.77,6.21,-4.56,0.8,1.5,1.19,0.03,">1 nonsynonymous","P7I K94L T140S L187V",4
"lib1","SARS-CoV-2","TGAGACCGAATTTAAA",1,24.43,6,-4.76,2,3,1.07,0,">1 nonsynonymous","L5E Y50I D97T F134P N171C",5
"lib1","SARS-CoV-2","TGAGACCTAAAAAACG",16,395.87,9.97,-0.8,0.06,2.31,1.05,0,"1 nonsynonymous","A14F",1
"lib1","SARS-CoV-2","TGAGACCTTAGTGTTG",7,57.85,10.64,-0.12,0.04,2.95,1.03,0,"1 nonsynonymous","K128F",1
"lib1","SARS-CoV-2","TGAGACGGGTTGCCTT",1,23.43,10.73,-0.04,0.07,2.97,1,0,">1 nonsynonymous","D34N S164T",2
"lib1","SARS-CoV-2","TGAGACGTAAAAGATG",10,106.12,8.63,-2.13,0.14,1.5,1.19,0.01,"1 nonsynonymous","S19L",1
"lib1","SARS-CoV-2","TGAGACGTTGTTTCAG",7,56.83,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W106V C150L",2
"lib1","SARS-CoV-2","TGAGACTACATCAAAA",2,30.43,10.82,0.06,0.08,2.96,1.03,0,"1 nonsynonymous","S29N",1
"lib1","SARS-CoV-2","TGAGACTCCCCATAAA",1,11.01,10.27,-0.49,0.23,2.33,1,0.02,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","TGAGACTCGTCGAATT",1,12.39,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","R25A K132H S139N",3
"lib1","SARS-CoV-2","TGAGACTTCCTAACTA",3,17.47,10.46,-0.3,0.11,2.81,1.16,0,">1 nonsynonymous","N13T L122T T201R",3
"lib1","SARS-CoV-2","TGAGACTTCTGACTCG",1,42.15,8.4,-2.36,0.31,1.5,1,0.04,">1 nonsynonymous","N30R Y35V A89T Y178I",4
"lib1","SARS-CoV-2","TGAGAGAAAAGCATTT",6,241.04,10.78,0.01,0.05,2.92,1.03,0,"1 nonsynonymous","N58Q",1
"lib1","SARS-CoV-2","TGAGAGAAGATCAAAC",1,1.32,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","TGAGAGACTTCAACTA",2,62.54,10.19,-0.58,0.05,2.99,1,0,">1 nonsynonymous","I28L S45F K87I",3
"lib1","SARS-CoV-2","TGAGAGATAGCGGTTA",5,100.57,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","W106E V173S",2
"lib1","SARS-CoV-2","TGAGAGCAATGGCATG",2,66.07,6,-4.76,2,1.5,1.12,0.01,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","TGAGAGCATGTTCTTA",2,16.33,6.11,-4.65,0.68,3,1.19,0.01,">1 nonsynonymous","G9F L38W T55S I104W I142N A145T",6
"lib1","SARS-CoV-2","TGAGAGCCAAGTTCCA",4,36.57,10.65,-0.12,0.09,2.9,1.07,0,"1 nonsynonymous","I2K",1
"lib1","SARS-CoV-2","TGAGAGCCCTACGAAT",4,19.26,7.54,-3.23,0.44,1.58,1.23,0.06,">1 nonsynonymous","A42T G117M R127A",3
"lib1","SARS-CoV-2","TGAGAGCTAGAGGAAA",2,35.88,8.87,-1.89,0.19,1.99,1.1,0.02,">1 nonsynonymous","Y35M I104T G146F",3
"lib1","SARS-CoV-2","TGAGAGGAGGTAAATC",5,19.71,8.79,-1.98,0.2,1.79,1.11,0.01,"1 nonsynonymous","P96W",1
"lib1","SARS-CoV-2","TGAGAGGCAACTACTG",14,207.96,8.6,-2.16,0.09,2.84,1.11,0,">1 nonsynonymous","R16T N157L",2
"lib1","SARS-CoV-2","TGAGAGGGACCTTAAT",8,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V V37P G51P W106D Y119S P161L",6
"lib1","SARS-CoV-2","TGAGAGGGCTAAAATC",3,77.41,10.7,-0.06,0.04,2.93,1.04,0,"1 nonsynonymous","R27S",1
"lib1","SARS-CoV-2","TGAGAGTAAAATAAAA",5,54.74,10.69,-0.07,0.05,2.9,1.07,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","TGAGAGTAAACGTGAG",4,53.26,10.45,-0.32,0.06,2.79,1.05,0,">1 nonsynonymous","T85W V115S L122K Q144K",4
"lib1","SARS-CoV-2","TGAGAGTGGCTTAAAA",3,10.01,10.32,-0.45,0.2,2.63,1.26,0.01,">1 nonsynonymous","E10V T100K",2
"lib1","SARS-CoV-2","TGAGAGTGTGACCCTA",2,26.98,8.96,-1.8,0.27,1.77,1.18,0.03,">1 nonsynonymous","S19L T100C",2
"lib1","SARS-CoV-2","TGAGAGTTAGATCGTG",9,146.05,10.68,-0.09,0.05,2.89,1.08,0,">1 nonsynonymous","T100C P191S",2
"lib1","SARS-CoV-2","TGAGAGTTAGGGACAA",6,117.91,10.42,-0.34,0.04,2.97,1.01,0,">1 nonsynonymous","C61E D98W",2
"lib1","SARS-CoV-2","TGAGATAAATTAAAAG",3,49.81,10.4,-0.37,0.06,2.88,1.06,0,">1 nonsynonymous","F134K T201M",2
"lib1","SARS-CoV-2","TGAGATAATACGGTAC",9,1.94,NA,NA,NA,NA,NA,NA,"stop","L38F Y39V K56* D68Y K114M C158G",6
"lib1","SARS-CoV-2","TGAGATACAGTAGATA",6,84.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47T D59L D98P I138R F156Y",5
"lib1","SARS-CoV-2","TGAGATAGTCAAACCA",6,68.41,8.81,-1.95,0.18,1.62,1.15,0.01,">1 nonsynonymous","G51A K128Q G155C",3
"lib1","SARS-CoV-2","TGAGATATAAGTGGGT",3,22.44,10.74,-0.02,0.07,3,1,0,"1 nonsynonymous","P133A",1
"lib1","SARS-CoV-2","TGAGATATATACTTTT",1,31.19,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","Y50S N107Q",2
"lib1","SARS-CoV-2","TGAGATATTACACCTT",1,51.6,10.72,-0.04,0.07,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGATCATGTTCTTC",5,40.35,10.74,-0.03,0.07,2.85,1.12,0,"1 nonsynonymous","F160R",1
"lib1","SARS-CoV-2","TGAGATCATTATATGT",9,26.71,8.04,-2.72,0.36,1.5,1.04,0.04,">1 nonsynonymous","P7R A42C N107Y F126L Q144S",5
"lib1","SARS-CoV-2","TGAGATCCATGGTAAT",2,24.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101P L122E F160Y",3
"lib1","SARS-CoV-2","TGAGATCCGCATCACC",3,40.3,6,-4.76,2,1.5,1.2,0.06,">1 nonsynonymous","N24L K48Y R136Q Q168N S184R",5
"lib1","SARS-CoV-2","TGAGATCCTAAAGATA",1,7.78,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","P96E W106P",2
"lib1","SARS-CoV-2","TGAGATCCTATCAAAC",1,27.07,10.34,-0.43,0.04,2.92,1.04,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TGAGATCTCAACACGG",1,8.68,9.14,-1.62,0.3,1.51,1.02,0.03,">1 nonsynonymous","L5V N13I W106K",3
"lib1","SARS-CoV-2","TGAGATCTTCAATGGA",1,17.68,10.6,-0.17,0.05,2.93,1,0,">1 nonsynonymous","S41K V153S",2
"lib1","SARS-CoV-2","TGAGATGAAAGATGTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","G51R W106G T148L T170* Q176G",5
"lib1","SARS-CoV-2","TGAGATGACGTAACTA",3,17.09,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T3F K56R R73G S139I",4
"lib1","SARS-CoV-2","TGAGATGAGCTAACCT",2,34.4,7.69,-3.07,0.34,1.72,1.22,0.02,">1 nonsynonymous","C61I D90C E135G G166C",4
"lib1","SARS-CoV-2","TGAGATGCATATCTAC",1,11.61,10.28,-0.48,0.09,2.9,1,0.01,">1 nonsynonymous","R16S A42S F44A",3
"lib1","SARS-CoV-2","TGAGATGCTATTGAAA",2,8.54,7.4,-3.37,0.6,1.5,1.1,0.08,">1 nonsynonymous","L5V Y50S T85W T100K",4
"lib1","SARS-CoV-2","TGAGATGCTCCTCCCG",7,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q D34M A67P G83V V103L D112N Y178P",7
"lib1","SARS-CoV-2","TGAGATGGCCAATAAT",2,56.77,10.33,-0.43,0.05,2.94,1.02,0,">1 nonsynonymous","A14C P54I L188R",3
"lib1","SARS-CoV-2","TGAGATTAAAGACGGT",1,18.54,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","Y119L R127F N157P",3
"lib1","SARS-CoV-2","TGAGATTAAATAACGT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","I2* L95T I104N S139I",4
"lib1","SARS-CoV-2","TGAGATTAGAATCGCA",17,268.42,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D34L Y39L Y50H N157D F167I",5
"lib1","SARS-CoV-2","TGAGATTCAACAACGA",9,70.99,6,-4.76,1.21,1.5,1.15,0,"1 nonsynonymous","F70K",1
"lib1","SARS-CoV-2","TGAGATTCTAACATCC",9,35.27,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6F N13Y E154L P161T",4
"lib1","SARS-CoV-2","TGAGATTCTACTATGG",3,2.01,NA,NA,NA,NA,NA,NA,"stop","C49H D59* Y93N",3
"lib1","SARS-CoV-2","TGAGATTGCTAACCAG",2,28.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6Y A67S I104N Y178V",4
"lib1","SARS-CoV-2","TGAGATTGGGATCTTA",2,66.37,9.43,-1.34,0.09,2.62,1.09,0,">1 nonsynonymous","A33S G83R E154L S184N",4
"lib1","SARS-CoV-2","TGAGATTTAATAGAGT",6,72.3,10.45,-0.32,0.04,2.92,1.02,0,">1 nonsynonymous","E10R S129A",2
"lib1","SARS-CoV-2","TGAGATTTATGGAATC",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S T201L",2
"lib1","SARS-CoV-2","TGAGATTTTCGGCATA",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140P F167L Y175M",3
"lib1","SARS-CoV-2","TGAGCAAAAATAAAGG",1,51.5,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","R27T Y159E T170F",3
"lib1","SARS-CoV-2","TGAGCAAAAGCTTGCG",4,74.42,10.72,-0.05,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGCAAAATAGCACC",8,50.78,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V37L D97V G101C E141V R179F",5
"lib1","SARS-CoV-2","TGAGCAAACATATTAC",8,116.59,9.66,-1.11,0.1,2.61,1.1,0,">1 nonsynonymous","T55C N120F P149V",3
"lib1","SARS-CoV-2","TGAGCAAAGTAGTCGC",6,94.36,10.74,-0.02,0.04,2.91,1.05,0,">1 nonsynonymous","I2M E141H",2
"lib1","SARS-CoV-2","TGAGCAACTTTCCCAG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A N64P K94C F134E V173R",5
"lib1","SARS-CoV-2","TGAGCAAGTACAGAGC",3,42.64,10.81,0.05,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGCAAGTATAGGAC",4,20.97,6,-4.76,1.56,1.5,1.15,0.02,">1 nonsynonymous","I28C D90I N118T K128M",4
"lib1","SARS-CoV-2","TGAGCAATAACTATTT",3,27.88,7.5,-3.27,0.47,1.5,1.11,0.06,">1 nonsynonymous","D34L T140F Q168C",3
"lib1","SARS-CoV-2","TGAGCAATACATCCAT",10,122.18,10.77,0.01,0.07,2.94,1.05,0,"1 nonsynonymous","L5P",1
"lib1","SARS-CoV-2","TGAGCAATAGTGAACT",4,38.19,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","W106D E141G",2
"lib1","SARS-CoV-2","TGAGCAATTAATATTG",3,1.79,NA,NA,NA,NA,NA,NA,"stop","L60* L122T G146T G152*",4
"lib1","SARS-CoV-2","TGAGCACATACAAGAG",4,48.38,8.63,-2.13,0.13,2.58,1.04,0.01,">1 nonsynonymous","S41F A105S S139E G166T",4
"lib1","SARS-CoV-2","TGAGCACATACCACAT",3,71.87,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","A89N N157M",2
"lib1","SARS-CoV-2","TGAGCACCATACGAGG",5,52.91,10.8,0.04,0.07,2.9,1.07,0,">1 nonsynonymous","Y39F F44L F47Y",3
"lib1","SARS-CoV-2","TGAGCACTAAGTCCAT",2,82.42,9.88,-0.89,0.07,2.03,1.08,0,">1 nonsynonymous","Y35W K56N E76C F160C",4
"lib1","SARS-CoV-2","TGAGCACTACGCCGGG",2,2.44,NA,NA,NA,NA,NA,NA,"stop","N13* A42M L60M Y123*",4
"lib1","SARS-CoV-2","TGAGCACTTCAAAGAA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C V103H",2
"lib1","SARS-CoV-2","TGAGCAGAGGATGTAA",2,15.76,10,-0.76,0.09,2.71,1.12,0,">1 nonsynonymous","T148Q Y175H",2
"lib1","SARS-CoV-2","TGAGCAGGACCACCAC",2,6.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W106I G117V F160Q V173R",4
"lib1","SARS-CoV-2","TGAGCAGGCCCCAGAA",6,93.07,8.71,-2.05,0.25,1.5,1.06,0.03,">1 nonsynonymous","F12H V32K K128S N171H",4
"lib1","SARS-CoV-2","TGAGCAGGGCAATTGT",1,20.94,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5F L38S N64L G74C K87G G117S",6
"lib1","SARS-CoV-2","TGAGCATACACACCCA",1,2.61,NA,NA,NA,NA,NA,NA,"stop","A14* G86A F99Y T201C",4
"lib1","SARS-CoV-2","TGAGCATACATTAGGT",2,34.06,6,-4.76,0.41,2.23,1.09,0,">1 nonsynonymous","T3S R16L Y21F T55H F99C I138V H189Y",7
"lib1","SARS-CoV-2","TGAGCATTCCATTGGC",6,0.85,NA,NA,NA,NA,NA,NA,"stop","E10R W23* T46P T85I P96N",5
"lib1","SARS-CoV-2","TGAGCATTGGAAACAA",1,5.4,6.15,-4.61,0.84,2.32,1.18,0.01,">1 nonsynonymous","V32R F47R K56T D97W",4
"lib1","SARS-CoV-2","TGAGCCAAACACCTTC",7,31.65,8.78,-1.99,0.09,2.84,1.1,0,">1 nonsynonymous","S113A A145P",2
"lib1","SARS-CoV-2","TGAGCCAAATCATGAT",5,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N R179M F185S",3
"lib1","SARS-CoV-2","TGAGCCAACATAATAA",1,34.86,8.32,-2.45,0.23,1.8,1.15,0.02,">1 nonsynonymous","L5N L60P G117R",3
"lib1","SARS-CoV-2","TGAGCCAACCTGTCTG",6,30.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9N F44I D68K Q84M S184H",5
"lib1","SARS-CoV-2","TGAGCCAAGAACATTC",3,16.13,6.03,-4.73,2,3,1.22,0.01,">1 nonsynonymous","L5Y A18S V77Q D90G W106G G155P V173I",7
"lib1","SARS-CoV-2","TGAGCCAATTGTATAA",2,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L W23V C61M",3
"lib1","SARS-CoV-2","TGAGCCACATTCTGTC",6,16.71,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","K56L V103L I138F F156R",4
"lib1","SARS-CoV-2","TGAGCCACCGCCTCCC",4,48.76,6.94,-3.82,0.4,1.5,1.1,0.03,">1 nonsynonymous","T46N D112V P149H",3
"lib1","SARS-CoV-2","TGAGCCAGTAGCAGCC",6,1.2,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","TGAGCCAGTGAGTCAG",5,84.81,10.55,-0.22,0.05,2.76,1.03,0,">1 nonsynonymous","F8L D59L",2
"lib1","SARS-CoV-2","TGAGCCATAGAGATAA",1,66.66,9.51,-1.25,0.11,1.93,1.08,0,">1 nonsynonymous","D34E Q79M K198M",3
"lib1","SARS-CoV-2","TGAGCCATCTCCATGA",6,33.75,6.64,-4.12,0.39,1.82,1.24,0.04,">1 nonsynonymous","C61N V103R K114T S200L",4
"lib1","SARS-CoV-2","TGAGCCATTAAGAGCT",10,105.85,6,-4.76,1.56,1.5,1.16,0.01,">1 nonsynonymous","F8S F167R",2
"lib1","SARS-CoV-2","TGAGCCATTGCAGGAA",3,66.03,9.76,-1,0.1,2.38,1.07,0,"1 nonsynonymous","C6R",1
"lib1","SARS-CoV-2","TGAGCCCAATCCACGC",1,41.51,10.69,-0.07,0.04,2.98,1,0,">1 nonsynonymous","I28L D90C",2
"lib1","SARS-CoV-2","TGAGCCCACTACAATA",6,29.29,9.9,-0.86,0.09,2.24,1.07,0,">1 nonsynonymous","D59E Y66A L122I S129F S200R",5
"lib1","SARS-CoV-2","TGAGCCCGTTAGGATA",7,28.21,9.02,-1.74,0.17,1.96,1.21,0.01,">1 nonsynonymous","G74L V173I",2
"lib1","SARS-CoV-2","TGAGCCCTGTCCTCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","T3S T15I N58* W106* G166R",5
"lib1","SARS-CoV-2","TGAGCCGAATACCGTT",2,27.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86C A105I A190W",3
"lib1","SARS-CoV-2","TGAGCCGGGAAGGGAC",2,24.53,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","F17N S41W G86L L131I",4
"lib1","SARS-CoV-2","TGAGCCTAACATTTAA",10,54.3,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","F12R S19L V77Y P96H A105F P149M P197G",7
"lib1","SARS-CoV-2","TGAGCCTAATATATGA",3,23.72,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6S L95P",2
"lib1","SARS-CoV-2","TGAGCCTATGCGAATG",1,35.8,10.2,-0.57,0.11,2.35,1,0.01,">1 nonsynonymous","D90W D97S",2
"lib1","SARS-CoV-2","TGAGCCTGAGATATAA",1,9.29,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F47N G166F G172L",3
"lib1","SARS-CoV-2","TGAGCGAAGCTATTAC",5,175.13,10.71,-0.06,0.04,2.89,1.05,0,">1 nonsynonymous","S41Y T201Y",2
"lib1","SARS-CoV-2","TGAGCGAATATGTTAT",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R N107S",2
"lib1","SARS-CoV-2","TGAGCGAGTTGTATTC",6,35.53,10.41,-0.36,0.06,2.86,1.01,0,">1 nonsynonymous","R136S T201E",2
"lib1","SARS-CoV-2","TGAGCGATACCAAACT",4,85.29,6,-4.76,1.36,1.5,1.15,0.01,">1 nonsynonymous","G83T Y93M F156M L162T P197S",5
"lib1","SARS-CoV-2","TGAGCGCTTTACTAGC",5,23.6,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V11A G101F Q168K",3
"lib1","SARS-CoV-2","TGAGCGGAATTAAGAA",4,63.48,10.13,-0.63,0.08,2.82,1,0,">1 nonsynonymous","C6W T85R",2
"lib1","SARS-CoV-2","TGAGCGGGTGACTAAG",1,8.52,9.85,-0.91,0.15,1.93,1.05,0.01,"1 nonsynonymous","T46P",1
"lib1","SARS-CoV-2","TGAGCGGTGACCATTT",2,17.45,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V20Q I104L D112H K114R",4
"lib1","SARS-CoV-2","TGAGCGGTGTCTTGCG",9,162.49,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","F17N R25F W106M R136G V181E",5
"lib1","SARS-CoV-2","TGAGCGGTTCATCTAA",3,12.18,6.4,-4.37,1.64,1.5,1.1,0.03,">1 nonsynonymous","A42V D68E C150V",3
"lib1","SARS-CoV-2","TGAGCTAAACACAGGA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","A81* G174W",2
"lib1","SARS-CoV-2","TGAGCTAAACCGGACT",12,60.86,6.14,-4.63,0.7,1.5,1.21,0.02,">1 nonsynonymous","C49S S139I G155S",3
"lib1","SARS-CoV-2","TGAGCTAAGCCGAAAC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGAGCTAATGGGGTAC",1,28.06,10.82,0.06,0.09,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAGCTAATTTAAACT",4,27.2,7.53,-3.23,0.42,1.5,1.09,0.08,">1 nonsynonymous","V77E W106I V182R K199E",4
"lib1","SARS-CoV-2","TGAGCTAGAAACAAGT",1,18.65,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y35L V103C G116E Y121S I138R Y178R",6
"lib1","SARS-CoV-2","TGAGCTAGCTATTAGT",11,165.08,10.77,0,0.07,2.88,1.08,0,">1 nonsynonymous","L122A S129R",2
"lib1","SARS-CoV-2","TGAGCTAGGCAAACTT",4,62.42,8.81,-1.95,0.12,2.73,1.07,0.01,">1 nonsynonymous","S36Y Y119I",2
"lib1","SARS-CoV-2","TGAGCTATAGTTAAAC",1,4.54,NA,NA,NA,NA,NA,NA,"stop","S19* N40S F62C V77*",4
"lib1","SARS-CoV-2","TGAGCTCAAAGTAGGA",3,17.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T46L V103R",2
"lib1","SARS-CoV-2","TGAGCTCAAGTTCACT",1,10.54,10.18,-0.58,0.12,2.72,1.18,0.01,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","TGAGCTCTAAAATAAC",1,24,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","N1F I88V G116R K132T Y165L V173T",6
"lib1","SARS-CoV-2","TGAGCTCTCTACATTA",3,18,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","A33E N92M D98E T170H",4
"lib1","SARS-CoV-2","TGAGCTCTGCTTTCAG",12,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107P F160C Y175W G196S",4
"lib1","SARS-CoV-2","TGAGCTGAAACTGTGA",6,31.38,6,-4.76,2,3,1.09,0,">1 nonsynonymous","Y35P S43P L57D L95S Y123I N151S L162M",7
"lib1","SARS-CoV-2","TGAGCTGAACGATTGA",3,2.57,NA,NA,NA,NA,NA,NA,"stop","Y39S C49* I104V P133* E141N S147R",6
"lib1","SARS-CoV-2","TGAGCTGCGAGTACTG",2,36.49,6.19,-4.58,0.97,1.5,1.09,0.04,">1 nonsynonymous","L60K F99V S139M F160V K199Q",5
"lib1","SARS-CoV-2","TGAGCTGTAGATGACC",1,0.28,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TGAGCTGTGACGCCTG",11,139.26,10.08,-0.69,0.07,2.72,1.03,0,">1 nonsynonymous","N1Q T55F L57W V115N T201L",5
"lib1","SARS-CoV-2","TGAGCTGTTGTAATCA",1,49.03,10.23,-0.53,0.03,2.88,1.01,0,">1 nonsynonymous","T3D F156S K198W",3
"lib1","SARS-CoV-2","TGAGGAACAACGGTAC",8,70.96,6,-4.76,2,1.5,1.25,0.01,"1 nonsynonymous","Y93W",1
"lib1","SARS-CoV-2","TGAGGAACTCCTTCCG",9,213.59,10.51,-0.25,0.03,2.93,1.04,0,"1 nonsynonymous","A18R",1
"lib1","SARS-CoV-2","TGAGGAATATAACTGA",2,49.52,7.12,-3.65,0.41,1.5,1.05,0.07,">1 nonsynonymous","S29L Y175H P177R",3
"lib1","SARS-CoV-2","TGAGGACAATCATAAA",1,7.63,6.84,-3.93,1.64,1.5,1.08,0.03,">1 nonsynonymous","C49K F134E",2
"lib1","SARS-CoV-2","TGAGGACGCATCGATT",3,70.33,10.78,0.01,0.05,2.87,1.07,0,"1 nonsynonymous","H189N",1
"lib1","SARS-CoV-2","TGAGGACTTAATATGT",4,20.51,6,-4.76,1.03,1.5,1.12,0.02,">1 nonsynonymous","F12M N92M T100I V173R",4
"lib1","SARS-CoV-2","TGAGGACTTCAAACCA",7,20.17,9.27,-1.49,0.35,1.5,1,0.05,">1 nonsynonymous","Y50C Q144G",2
"lib1","SARS-CoV-2","TGAGGAGAATTTCATC",2,19.44,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","V11D V37I T170G G174S S184P",5
"lib1","SARS-CoV-2","TGAGGAGACAAACGAA",3,37.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9W A14L S29L N171T R179D",5
"lib1","SARS-CoV-2","TGAGGAGATAGACGGG",2,20.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L A18T I28T W106P Y121L N151T E186T",7
"lib1","SARS-CoV-2","TGAGGAGCCATAAGTT",5,43.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4G C61K R127L G146V E154D",5
"lib1","SARS-CoV-2","TGAGGAGCTATTATTC",4,59.38,10.79,0.03,0.08,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGGAGGATTCGATT",4,60.5,9.5,-1.27,0.13,2.41,1.07,0.01,">1 nonsynonymous","P7L K26L V37M T170A",4
"lib1","SARS-CoV-2","TGAGGAGGGACTGGAA",5,0.27,NA,NA,NA,NA,NA,NA,"stop","T3H R16* A105W",3
"lib1","SARS-CoV-2","TGAGGAGGTCGTAAGC",1,13.72,6.06,-4.7,1.1,1.5,1.19,0.05,">1 nonsynonymous","K56P W106I G174P K199Y",4
"lib1","SARS-CoV-2","TGAGGATATAACCGCA",3,12.06,10.8,0.04,0.08,2.97,1,0,"1 nonsynonymous","A42R",1
"lib1","SARS-CoV-2","TGAGGATATAATACAG",3,35.78,10.74,-0.03,0.07,2.97,1.01,0,">1 nonsynonymous","T55W K114Q K198P",3
"lib1","SARS-CoV-2","TGAGGCAAATTTTACC",6,63.7,6.93,-3.83,0.39,1.5,1.18,0.03,">1 nonsynonymous","C6A R25F Y39R G51I C61V I72R N120V",7
"lib1","SARS-CoV-2","TGAGGCAGCATTCACA",2,7.89,6.9,-3.86,0.42,1.5,1,0.04,">1 nonsynonymous","S19M S41T P133M T201G",4
"lib1","SARS-CoV-2","TGAGGCATATCAGACC",6,69.11,7.79,-2.97,0.32,1.5,1.02,0.03,">1 nonsynonymous","I28R K87V G116W L131V K198S",5
"lib1","SARS-CoV-2","TGAGGCCCAAACACGA",2,5.42,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","K56P I88R C150S Y165L R179S",5
"lib1","SARS-CoV-2","TGAGGCGAAAAATAAA",7,68.4,10.81,0.05,0.07,2.91,1.08,0,">1 nonsynonymous","S36K S200F",2
"lib1","SARS-CoV-2","TGAGGCGGAAAAAACG",8,166.14,9.37,-1.39,0.07,2.66,1.1,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","TGAGGCTATAAGGTAC",2,13.67,8.71,-2.05,0.14,2.92,1.04,0.01,">1 nonsynonymous","E10Q S41L G155D G174L T201V",5
"lib1","SARS-CoV-2","TGAGGCTATTCAGACC",1,18.66,10.52,-0.24,0.11,2.89,1.1,0,">1 nonsynonymous","T3Q I138T",2
"lib1","SARS-CoV-2","TGAGGCTTGCCCACAT",5,51.99,6.02,-4.74,0.83,1.5,1.14,0.01,">1 nonsynonymous","A33T K114Q Y121F P149Q Q163L Q176S",6
"lib1","SARS-CoV-2","TGAGGCTTTAGAGGTG",4,43.62,9.03,-1.74,0.13,1.67,1.12,0.01,">1 nonsynonymous","K94L T148S",2
"lib1","SARS-CoV-2","TGAGGGAAACTTGATG",6,1.43,NA,NA,NA,NA,NA,NA,"stop","A42T L57*",2
"lib1","SARS-CoV-2","TGAGGGACAAATACCC",3,24.49,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","A33R C49D F156L",3
"lib1","SARS-CoV-2","TGAGGGACCACTATAT",5,40.94,8.25,-2.51,0.18,1.88,1.07,0.02,">1 nonsynonymous","D112S L122A T201E",3
"lib1","SARS-CoV-2","TGAGGGAGAAATAGTT",9,140.73,9.85,-0.91,0.09,2.16,1.07,0,">1 nonsynonymous","N4H D59Y L60M A105C",4
"lib1","SARS-CoV-2","TGAGGGAGCTTAGGTA",4,17.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5Q T46K W106G E186K",4
"lib1","SARS-CoV-2","TGAGGGATATCCACGT",1,18.73,9.91,-0.85,0.11,2.44,1,0,">1 nonsynonymous","I2T Y35C A89S",3
"lib1","SARS-CoV-2","TGAGGGATTAGAATGC",1,52.85,10.72,-0.05,0.08,2.95,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAGGGCCAAGGATAG",5,48.77,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I80G W106L",2
"lib1","SARS-CoV-2","TGAGGGCGGTGCCGGG",2,43.36,10.74,-0.02,0.1,2.92,1.06,0.01,"1 nonsynonymous","T55A",1
"lib1","SARS-CoV-2","TGAGGGGCCGATACAG",7,118.06,8.36,-2.4,0.16,1.53,1.14,0.01,">1 nonsynonymous","Y91D G166V",2
"lib1","SARS-CoV-2","TGAGGGTGAAGTGATC",3,1.54,NA,NA,NA,NA,NA,NA,"stop","E10N W23D A33* D59A S129P",5
"lib1","SARS-CoV-2","TGAGGTAAATCTTGTT",2,9.47,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F70E D137S",2
"lib1","SARS-CoV-2","TGAGGTAATGAGCTAA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","F17* Q84H",2
"lib1","SARS-CoV-2","TGAGGTAGACCAGAAC",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L D98I N118E F126Q G146T",5
"lib1","SARS-CoV-2","TGAGGTATGATATGCC",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M C49Y Y121M",3
"lib1","SARS-CoV-2","TGAGGTATTAAATTCC",2,8.06,6,-4.76,2,3,1.04,0,">1 nonsynonymous","T15I D68G G83R S139T",4
"lib1","SARS-CoV-2","TGAGGTCACGCAGCCG",2,14.04,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","G86S D98M R127L",3
"lib1","SARS-CoV-2","TGAGGTCGATATGACG",4,28.11,8.27,-2.49,0.2,1.85,1.23,0.02,">1 nonsynonymous","T3R N107R Y123V",3
"lib1","SARS-CoV-2","TGAGGTCGTATCCCAT",10,30.28,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","I2P F8V V65L P82F A89T P96S",6
"lib1","SARS-CoV-2","TGAGGTCTTTTACTTT",4,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N T201I",2
"lib1","SARS-CoV-2","TGAGGTGAACCACTAC",15,109.09,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N92L I142T C158G S164L G172N",5
"lib1","SARS-CoV-2","TGAGGTGCTTACCCTG",2,16.8,8.78,-1.99,0.24,1.5,1.14,0.03,">1 nonsynonymous","I2P F47S N120H F160I",4
"lib1","SARS-CoV-2","TGAGGTGGTATTCACA",2,16.04,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","V20S K56G N107T R127L D137F",5
"lib1","SARS-CoV-2","TGAGGTTAAATGGGGG",4,69.38,10.48,-0.29,0.06,2.94,1.02,0,"1 nonsynonymous","L38V",1
"lib1","SARS-CoV-2","TGAGGTTCGACTAACC",2,38.23,10.71,-0.05,0.06,2.89,1.04,0,">1 nonsynonymous","E10D S29Q",2
"lib1","SARS-CoV-2","TGAGGTTGGGTATAAG",1,9.37,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","N58S Y66F N92E T193Y V194G",5
"lib1","SARS-CoV-2","TGAGGTTTATATTATT",3,79.8,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","E10W A89R S139N N151I G196V",5
"lib1","SARS-CoV-2","TGAGGTTTGAAAGTAC",4,5.68,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","N40I C61L A89E A105S Y143L",5
"lib1","SARS-CoV-2","TGAGTAAAAATTGTCT",7,39.76,10.21,-0.55,0.06,2.84,1,0,">1 nonsynonymous","A42T L60M A81T",3
"lib1","SARS-CoV-2","TGAGTAAAACTTTAAT",2,21.26,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","N64R F99Y N107T G155F P191K",5
"lib1","SARS-CoV-2","TGAGTAAAAGCCCAAG",4,13.33,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49P P82S C102N",3
"lib1","SARS-CoV-2","TGAGTAAAGATGTTAG",2,0.6,NA,NA,NA,NA,NA,NA,"stop","N92V L122A T201*",3
"lib1","SARS-CoV-2","TGAGTAAATAAAGAGA",6,145.76,8.93,-1.83,0.05,2.83,1.07,0,">1 nonsynonymous","G117M S129M",2
"lib1","SARS-CoV-2","TGAGTAACGTAGGAAC",5,98.16,8.75,-2.02,0.07,2.8,1.06,0,">1 nonsynonymous","A33H N157S",2
"lib1","SARS-CoV-2","TGAGTAAGGCCTAAGG",1,18.21,10.24,-0.53,0.1,2.97,1.02,0.01,">1 nonsynonymous","N120G E154I",2
"lib1","SARS-CoV-2","TGAGTACACTTATTCA",2,44.41,10.81,0.04,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGTACATTCAGTAA",10,99.38,7.93,-2.84,0.16,1.83,1.12,0.01,">1 nonsynonymous","N110D C150N E154P",3
"lib1","SARS-CoV-2","TGAGTACGGGCTAGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib1","SARS-CoV-2","TGAGTACGTATTCAAA",8,42.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L38D I142S T148F",3
"lib1","SARS-CoV-2","TGAGTACTACAATTAC",4,10.41,6.81,-3.95,0.5,3,1.22,0.02,">1 nonsynonymous","T15C F156M V181S",3
"lib1","SARS-CoV-2","TGAGTACTCAATCATT",1,61.97,10.62,-0.15,0.07,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAGTAGCACACACCC",4,1.08,NA,NA,NA,NA,NA,NA,"stop","E10* F134D G196W",3
"lib1","SARS-CoV-2","TGAGTAGGGTGATCTA",3,44.43,10.66,-0.1,0.05,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TGAGTAGGTGAACGGG",2,91.33,8.63,-2.13,0.15,1.9,1.13,0.01,">1 nonsynonymous","W106R N118S",2
"lib1","SARS-CoV-2","TGAGTAGGTGGTGAGC",1,20.07,10.19,-0.57,0.08,2.86,1,0.01,">1 nonsynonymous","S41H V77M I104W A190G S200C",5
"lib1","SARS-CoV-2","TGAGTATCTAAAACGG",4,68.7,10.16,-0.6,0.04,2.96,1,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","TGAGTATCTTATGACG",3,15.78,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","N1K I88N",2
"lib1","SARS-CoV-2","TGAGTATGAAATTAGA",1,23.09,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S45V L57N S139I T201E",4
"lib1","SARS-CoV-2","TGAGTATGCGTATCGA",2,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E Y159C",2
"lib1","SARS-CoV-2","TGAGTATGTTGCCGGT",2,34.24,7.64,-3.12,0.2,1.78,1.15,0.01,">1 nonsynonymous","R27L V37R G86C",3
"lib1","SARS-CoV-2","TGAGTATTCGGTTTCG",3,70.97,8.8,-1.96,0.08,2.87,1.09,0,">1 nonsynonymous","A81G Y119L L188E",3
"lib1","SARS-CoV-2","TGAGTATTGTCAAATG",8,88.07,10.75,-0.02,0.07,2.91,1.07,0,"1 nonsynonymous","N64E",1
"lib1","SARS-CoV-2","TGAGTCACTCTAATGG",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57P V103L",2
"lib1","SARS-CoV-2","TGAGTCATATGAACAT",1,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F G86C F134Y",3
"lib1","SARS-CoV-2","TGAGTCATCTTAAAAA",1,8.28,10.65,-0.12,0.1,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGTCCAGAGAAAGC",3,62.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I80M G86I",2
"lib1","SARS-CoV-2","TGAGTCCATGCGACAC",2,32.41,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","G51T L122S S139D L162T T170L",5
"lib1","SARS-CoV-2","TGAGTCCCAATCTAAA",1,8.75,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L38A Y93L D112E",3
"lib1","SARS-CoV-2","TGAGTCCCCGGATGGC",1,17.31,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","P7L A18T S129F V173L R179P",5
"lib1","SARS-CoV-2","TGAGTCCGATTAATTA",1,17.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R179C F185S",2
"lib1","SARS-CoV-2","TGAGTCCGGACTTAAA",4,53.68,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F17S K94V A105Y",3
"lib1","SARS-CoV-2","TGAGTCCGGCACAACG",2,35.56,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","F44N C61F D112P T201R",4
"lib1","SARS-CoV-2","TGAGTCCTTAGCATAC",1,20.84,10.38,-0.39,0.12,2.86,1.07,0.01,">1 nonsynonymous","A42R D59V S164Y",3
"lib1","SARS-CoV-2","TGAGTCGAGAATGGGT",4,37.19,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","V37Y G51V T63H D90P D112W",5
"lib1","SARS-CoV-2","TGAGTCGATCTATAAT",1,12.23,10.53,-0.23,0.16,2.88,1.02,0.01,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","TGAGTCTCGCAGGCAT",1,0.87,NA,NA,NA,NA,NA,NA,"stop","A14G K56* Y119I K132N",4
"lib1","SARS-CoV-2","TGAGTCTTACATGACC",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E G117S Y175C S200L",4
"lib1","SARS-CoV-2","TGAGTCTTATGTAGAA",2,7.98,10.79,0.02,0.1,2.75,1.25,0,"1 nonsynonymous","S147M",1
"lib1","SARS-CoV-2","TGAGTGAAACCACCAA",4,10.81,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G9W F70Q L122S R127L L162M",5
"lib1","SARS-CoV-2","TGAGTGAAGTATTGGT",9,120.86,9.76,-1.01,0.07,1.96,1.08,0,"1 nonsynonymous","P82T",1
"lib1","SARS-CoV-2","TGAGTGCAGTATGGGC",1,1.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P177N",1
"lib1","SARS-CoV-2","TGAGTGCATCCACTCC",4,4.46,NA,NA,NA,NA,NA,NA,"stop","T55V P82T P96*",3
"lib1","SARS-CoV-2","TGAGTGCCCCTCCTAA",2,54.22,10.74,-0.03,0.04,2.96,1.01,0,">1 nonsynonymous","I28F L60R G146S",3
"lib1","SARS-CoV-2","TGAGTGCCTTAAAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1W A14* S43R C49W L57P G155D C195L",7
"lib1","SARS-CoV-2","TGAGTGCGGAGTTCCT",1,27.02,6.28,-4.48,0.37,1.5,1.12,0.01,">1 nonsynonymous","Y91N A105V N157P",3
"lib1","SARS-CoV-2","TGAGTGCTATCGCAAA",4,29.88,10.78,0.01,0.06,2.96,1,0,">1 nonsynonymous","S29Q I142L",2
"lib1","SARS-CoV-2","TGAGTGCTCTGACTGA",2,31.84,10.62,-0.15,0.22,2.74,1.25,0.01,">1 nonsynonymous","A22S C61Y",2
"lib1","SARS-CoV-2","TGAGTGCTTGAAGAGG",1,27.79,6,-4.76,2,1.5,1.27,0.08,">1 nonsynonymous","L5V S53L W106F G116R E135G G146L",6
"lib1","SARS-CoV-2","TGAGTGGAAAAAGGAA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","Y50K K56V L60Q A67F E141* Y175R",6
"lib1","SARS-CoV-2","TGAGTGGACTCTCAAA",7,79.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51N Y66A Q84E L122V K128S S164I",6
"lib1","SARS-CoV-2","TGAGTGGAGGAGATCA",1,37.49,9.74,-1.02,0.08,1.83,1.05,0,">1 nonsynonymous","R16M G51V K56S D97N",4
"lib1","SARS-CoV-2","TGAGTGGTCCTGACTA",5,0.09,NA,NA,NA,NA,NA,NA,"stop","G9W A105* R136T Y143M V173W",5
"lib1","SARS-CoV-2","TGAGTGGTTATTAACG",9,120.61,10.33,-0.44,0.05,2.97,1.01,0,">1 nonsynonymous","A14R K87I",2
"lib1","SARS-CoV-2","TGAGTGTATACAAGTC",2,73.37,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V115S C158T",2
"lib1","SARS-CoV-2","TGAGTGTTTTCATAAA",1,31.97,9.77,-0.99,0.07,2.81,1.05,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","TGAGTTAAAGGCCATG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35T I80G A105M Y175*",4
"lib1","SARS-CoV-2","TGAGTTAAATCCGTAG",1,14.96,9.72,-1.04,0.14,2.53,1.07,0.01,">1 nonsynonymous","A67S E141V",2
"lib1","SARS-CoV-2","TGAGTTAACCCGCGCA",7,81,7.12,-3.64,0.36,1.5,1.17,0.03,"1 nonsynonymous","D112G",1
"lib1","SARS-CoV-2","TGAGTTAAGCGACCCA",4,21.78,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C6G F17E D34Y R73V",4
"lib1","SARS-CoV-2","TGAGTTACACGACTTT",10,14.99,7.21,-3.56,0.18,2.72,1.08,0.01,">1 nonsynonymous","T15H Y50C",2
"lib1","SARS-CoV-2","TGAGTTACTAAGTAGT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","C49I T55* A81V",3
"lib1","SARS-CoV-2","TGAGTTACTCTAACAA",2,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87T Y121F R179D P197Q",4
"lib1","SARS-CoV-2","TGAGTTATATCGCAAA",1,45.63,9.56,-1.2,0.07,2.93,1.05,0,"1 nonsynonymous","Y119S",1
"lib1","SARS-CoV-2","TGAGTTATATCGCTAA",2,19.92,10.77,0,0.09,2.95,1.01,0,"1 nonsynonymous","K114A",1
"lib1","SARS-CoV-2","TGAGTTATTCAAATAT",1,75.09,10.8,0.04,0.06,2.94,1.02,0,"1 nonsynonymous","P191T",1
"lib1","SARS-CoV-2","TGAGTTATTCCCTTTC",6,0.53,NA,NA,NA,NA,NA,NA,"stop","T3* S41L L95H P149L T201W",5
"lib1","SARS-CoV-2","TGAGTTATTCCGAATG",4,8.04,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T15I V20R Y91I E141I",4
"lib1","SARS-CoV-2","TGAGTTATTTCTTGCG",2,17.97,9.43,-1.33,0.21,1.79,1.16,0.02,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","TGAGTTCATCATCCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N40V K128P S139*",3
"lib1","SARS-CoV-2","TGAGTTCCAATAAGAT",3,94.39,10.01,-0.75,0.07,2.85,1.02,0,">1 nonsynonymous","T46V G152P",2
"lib1","SARS-CoV-2","TGAGTTCCCTAGCCCA",3,13.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N107R R124M",2
"lib1","SARS-CoV-2","TGAGTTCGCCATGGAC",4,26.38,6.16,-4.61,0.56,1.5,1.12,0.02,">1 nonsynonymous","I2S C61L D97G V103F",4
"lib1","SARS-CoV-2","TGAGTTCTATACGATG",3,17.95,9.3,-1.47,0.18,2.07,1.05,0.02,">1 nonsynonymous","A105M G116Y",2
"lib1","SARS-CoV-2","TGAGTTGAACCATGAT",2,60.03,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","N24A G86F V103R L122Y H189C",5
"lib1","SARS-CoV-2","TGAGTTGACTGCTACA",10,1.32,NA,NA,NA,NA,NA,NA,"stop","N24R S69L K94Y G146I T201*",5
"lib1","SARS-CoV-2","TGAGTTGAGCAAAATG",1,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L Q144R P149S Q168L Y175R S184P K198M",7
"lib1","SARS-CoV-2","TGAGTTGCGTTAACCC",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N Y50S N110M R127K",4
"lib1","SARS-CoV-2","TGAGTTGCTACAGACT",3,43.93,6.21,-4.55,0.95,1.5,1.18,0.04,">1 nonsynonymous","L5F C31Q Q84S N107L",4
"lib1","SARS-CoV-2","TGAGTTGGGGAGCTGG",3,43.09,10.93,0.17,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGTTGTTAAGTATC",2,22.1,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G9Y L38F Y91L D98K C158R T201W",6
"lib1","SARS-CoV-2","TGAGTTTATCTATTTA",3,67.32,10.77,0.01,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGAGTTTATGGATGGG",1,7.14,10.45,-0.31,0.07,2.72,1.07,0,">1 nonsynonymous","R16N S45Q P169V",3
"lib1","SARS-CoV-2","TGAGTTTCAAAAGCTT",4,18.64,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","I28V C158Y",2
"lib1","SARS-CoV-2","TGAGTTTGCCATTTGT",7,140.54,10.37,-0.39,0.04,2.87,1.03,0,">1 nonsynonymous","I2N E10I T63R",3
"lib1","SARS-CoV-2","TGAGTTTTACATCATG",3,65.46,10.16,-0.61,0.06,2.69,1.03,0,">1 nonsynonymous","P7G Y123L",2
"lib1","SARS-CoV-2","TGATAAAAAAAAACTG",9,75.28,10.73,-0.03,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATAAAAAAGATTTA",1,7.83,9.96,-0.8,0.07,2.95,1,0,"1 nonsynonymous","C6I",1
"lib1","SARS-CoV-2","TGATAAAAAATAATTA",4,56.64,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","D59N A67S Y121M I142W",4
"lib1","SARS-CoV-2","TGATAAAAGTAAGGTA",5,41.08,9.36,-1.4,0.39,1.5,1,0.07,">1 nonsynonymous","S41L F47V D68T E186N",4
"lib1","SARS-CoV-2","TGATAAAAGTCCTAAA",2,28,8.86,-1.91,0.35,1.64,1.08,0.05,">1 nonsynonymous","A89P W106F Y119V",3
"lib1","SARS-CoV-2","TGATAAAATCAAAAAG",1,84.08,9.56,-1.2,0.11,1.88,1.13,0,">1 nonsynonymous","N110K V173T",2
"lib1","SARS-CoV-2","TGATAAAATCCGTATT",2,30.27,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N64V G83Y A89G L95E",4
"lib1","SARS-CoV-2","TGATAAACAACATAAG",2,18.16,7.02,-3.74,0.28,1.64,1.18,0.01,">1 nonsynonymous","L57M Y143C P149Q",3
"lib1","SARS-CoV-2","TGATAAACACACCTGC",2,26.34,9.41,-1.36,0.16,2.13,1.08,0.01,">1 nonsynonymous","Y35I P133L",2
"lib1","SARS-CoV-2","TGATAAACAGAAATAG",3,56.47,10.44,-0.32,0.05,2.97,1,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","TGATAAACCATTAGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","S113C K128F N171* F185C",4
"lib1","SARS-CoV-2","TGATAAACGTGCTACA",1,16.34,8.58,-2.19,0.33,1.5,1,0.07,">1 nonsynonymous","Y39I S69E D90Y",3
"lib1","SARS-CoV-2","TGATAAAGTTATCGAT",3,42.08,10.36,-0.4,0.08,2.85,1.05,0,"1 nonsynonymous","Y123C",1
"lib1","SARS-CoV-2","TGATAAATAACAGGTC",1,12.14,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T55S K94Y N157Y",3
"lib1","SARS-CoV-2","TGATAAATAAGCTAAA",6,165.06,8.46,-2.31,0.11,2.69,1.09,0.01,">1 nonsynonymous","R16I Y175C",2
"lib1","SARS-CoV-2","TGATAAATCAAGAGGC",3,62.64,9.07,-1.69,0.07,2.68,1.12,0,">1 nonsynonymous","T3W Y119L",2
"lib1","SARS-CoV-2","TGATAAATCGAAGTAT",4,12.7,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","R73G E135R Q144S C158P",4
"lib1","SARS-CoV-2","TGATAAATGAGTTCAC",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71Y W106L Q168L E186I T201G",5
"lib1","SARS-CoV-2","TGATAAATGATGAAAT",3,54.8,8.25,-2.52,0.23,1.98,1.14,0.02,">1 nonsynonymous","C61Q Y143K P197G",3
"lib1","SARS-CoV-2","TGATAAATTCGCAGAG",3,18.06,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V32N Y93W",2
"lib1","SARS-CoV-2","TGATAAATTGCCTTGA",2,84.03,8.64,-2.12,0.1,2.86,1.11,0,">1 nonsynonymous","I2P K48V K87T T170L S200V",5
"lib1","SARS-CoV-2","TGATAAATTTGATCGA",1,29.97,10.62,-0.14,0.05,2.96,1.01,0,"1 nonsynonymous","T85I",1
"lib1","SARS-CoV-2","TGATAACAAGGATTTG",8,50.93,6,-4.76,2,1.5,1.22,0.02,"1 nonsynonymous","V71K",1
"lib1","SARS-CoV-2","TGATAACACAAAAAAT",10,87.11,10.8,0.04,0.05,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATAACCAAGGCGTT",10,102.7,10.79,0.02,0.07,2.94,1.01,0,">1 nonsynonymous","D98L L122R K198I",3
"lib1","SARS-CoV-2","TGATAACCATGTAGTA",2,7.68,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","C6G S53A L60H P96S V115N S129P T170M",7
"lib1","SARS-CoV-2","TGATAACGAACCGATC",3,73.26,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R27S Q84L I138N G146P",4
"lib1","SARS-CoV-2","TGATAACGACAATGGG",6,9.93,6,-4.76,1.41,3,1.21,0.01,">1 nonsynonymous","T3S G9R P96G P161S V181P P197T",6
"lib1","SARS-CoV-2","TGATAACGGGCCCCAT",1,12.06,9.13,-1.64,0.17,2.59,1.09,0.01,">1 nonsynonymous","L38W T63R K128G G166S",4
"lib1","SARS-CoV-2","TGATAACGTCCACTAT",8,111.86,8.72,-2.04,0.11,2.63,1.11,0,">1 nonsynonymous","F44L Y119L",2
"lib1","SARS-CoV-2","TGATAACTAGGAAAAG",6,64.02,10.87,0.1,0.07,2.86,1.09,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TGATAACTGAATGTAT",9,82.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F8E A81T N157V",3
"lib1","SARS-CoV-2","TGATAACTTTTCACAA",2,20,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C61A G86C F99A",3
"lib1","SARS-CoV-2","TGATAAGAACTACATC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* N58S G83H N109L K128T Q144S G174I",7
"lib1","SARS-CoV-2","TGATAAGAATACCTAT",5,1.89,NA,NA,NA,NA,NA,NA,"stop","G9V R27I F62* L122W",4
"lib1","SARS-CoV-2","TGATAAGAATATCATC",8,149.96,10.73,-0.03,0.05,2.92,1.04,0,"1 nonsynonymous","P149Q",1
"lib1","SARS-CoV-2","TGATAAGACACAAAAA",2,103.49,10.25,-0.51,0.04,2.91,1,0,">1 nonsynonymous","K87G P197G",2
"lib1","SARS-CoV-2","TGATAAGAGACCTGTT",11,150.99,8.45,-2.32,0.12,2.71,1.11,0.01,">1 nonsynonymous","S113N G117V",2
"lib1","SARS-CoV-2","TGATAAGAGCAATCAA",3,87.1,10.72,-0.05,0.06,2.89,1.07,0,"1 nonsynonymous","D90Q",1
"lib1","SARS-CoV-2","TGATAAGAGTTTAGAT",1,16.19,10.63,-0.13,0.06,2.97,1.03,0,">1 nonsynonymous","K114E R136K",2
"lib1","SARS-CoV-2","TGATAAGATAGAGGTA",11,66.05,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A14R N64P T100H Y178P",4
"lib1","SARS-CoV-2","TGATAAGCGCTATTTA",5,65.63,9.27,-1.5,0.16,1.5,1.09,0.01,">1 nonsynonymous","D34A Y165F",2
"lib1","SARS-CoV-2","TGATAAGCTAACGTAC",2,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98W G101R L125P",3
"lib1","SARS-CoV-2","TGATAAGGACGCTGTG",2,7.6,9.58,-1.18,0.19,2.45,1.07,0.01,">1 nonsynonymous","A67L A89V A190I",3
"lib1","SARS-CoV-2","TGATAAGGGAATACCC",6,68.32,10.06,-0.7,0.1,2.43,1,0,">1 nonsynonymous","T15Y S129I",2
"lib1","SARS-CoV-2","TGATAAGGGGTTACCA",4,25.49,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A105S L131R",2
"lib1","SARS-CoV-2","TGATAAGTAAATCAGT",2,30.58,7.86,-2.91,0.37,1.5,1.15,0.05,">1 nonsynonymous","N107F N171T",2
"lib1","SARS-CoV-2","TGATAAGTAGTGGTCC",2,42.64,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R25A G83C Y91L E154G",4
"lib1","SARS-CoV-2","TGATAAGTGCCTACAG",6,43.11,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S36Q F99I A105T V115N",4
"lib1","SARS-CoV-2","TGATAAGTGGTTGAGT",1,20,10.78,0.02,0.1,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATAAGTTATACGCA",2,14.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30H S69M I88Y L95S",4
"lib1","SARS-CoV-2","TGATAAGTTTCCGACA",1,19.13,10.61,-0.16,0.09,2.82,1.19,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATAATACCCTCTCC",7,35.39,6.84,-3.92,0.54,1.5,1.26,0.05,">1 nonsynonymous","S53F L57S V103L I138N",4
"lib1","SARS-CoV-2","TGATAATATCGATTTA",3,59.04,10.74,-0.02,0.08,2.89,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TGATAATCCTTAGATG",3,175.81,10.52,-0.24,0.04,2.88,1.05,0,">1 nonsynonymous","D59K T148L A190I",3
"lib1","SARS-CoV-2","TGATAATGTATAACAA",6,22.42,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R25E K94W G116I P133L P149S",5
"lib1","SARS-CoV-2","TGATAATTATACTGGT",1,20.47,9.58,-1.18,0.15,2.41,1.08,0.01,">1 nonsynonymous","F8V A33R F160P",3
"lib1","SARS-CoV-2","TGATAATTCAATGTAT",5,69.43,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39M F167C",2
"lib1","SARS-CoV-2","TGATACAAACCAAACG",6,79.18,7.48,-3.28,0.24,1.5,1.1,0.02,">1 nonsynonymous","R127S D137R N157H",3
"lib1","SARS-CoV-2","TGATACAAAGACAAAC",2,106.78,10.72,-0.05,0.05,2.94,1.02,0,">1 nonsynonymous","R16Y E141A",2
"lib1","SARS-CoV-2","TGATACACAAGTCCTA",9,0.56,NA,NA,NA,NA,NA,NA,"stop","A89F D97Y N107* L162K",4
"lib1","SARS-CoV-2","TGATACACATATAAAT",2,32.83,6,-4.76,1.5,1.65,1.12,0.01,">1 nonsynonymous","D90F D137N",2
"lib1","SARS-CoV-2","TGATACACATCATTCC",6,115.9,10.11,-0.65,0.09,2.26,1,0,">1 nonsynonymous","C102L K128P",2
"lib1","SARS-CoV-2","TGATACAGAATTTTTT",2,18.8,10.83,0.06,0.12,2.91,1.04,0,">1 nonsynonymous","E154L S164K",2
"lib1","SARS-CoV-2","TGATACAGATAAGTTG",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A F17S T201I",3
"lib1","SARS-CoV-2","TGATACAGGTACATGG",6,160.69,7.81,-2.96,0.13,1.86,1.12,0.01,">1 nonsynonymous","C61V G146Q N151Q G155R K198S",5
"lib1","SARS-CoV-2","TGATACATATATAATA",2,49.3,9.41,-1.35,0.2,2,1.16,0.02,">1 nonsynonymous","K26G A33E K132S Y178H",4
"lib1","SARS-CoV-2","TGATACATTTATAGAA",2,42.9,8.62,-2.14,0.09,2.94,1.08,0,">1 nonsynonymous","I142L T148I T170C",3
"lib1","SARS-CoV-2","TGATACCAGATCTTAC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","C6F G116*",2
"lib1","SARS-CoV-2","TGATACCATGCCGTAG",7,88.2,10.1,-0.66,0.1,2.21,1.06,0,">1 nonsynonymous","S53Y G83L D98R",3
"lib1","SARS-CoV-2","TGATACCCGCTGTAGG",2,6.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49K",1
"lib1","SARS-CoV-2","TGATACCCTATAGGCG",8,97.96,9.92,-0.84,0.06,2.45,1.03,0,"1 nonsynonymous","K94V",1
"lib1","SARS-CoV-2","TGATACCCTGGTAAAA",2,12.07,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L38T I80R G86R S129N",4
"lib1","SARS-CoV-2","TGATACCGAACGATGA",1,11.31,10.66,-0.11,0.23,2.99,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGATACCGCACAAACC",2,61.22,10.8,0.04,0.06,2.92,1.06,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","TGATACCTAACAAGAT",4,32.61,6.17,-4.59,1.05,1.5,1.21,0.05,">1 nonsynonymous","K56R F62S I72L T100H S139Y",5
"lib1","SARS-CoV-2","TGATACGAGGGGATTG",3,5.46,8.19,-2.57,0.54,1.54,1.03,0.07,">1 nonsynonymous","C158Q L183P",2
"lib1","SARS-CoV-2","TGATACGATTAACGAA",2,13.63,9.55,-1.21,0.23,1.99,1.16,0.02,">1 nonsynonymous","L60H R136W N151F",3
"lib1","SARS-CoV-2","TGATACGCCCTAAACA",1,45.45,6.05,-4.72,1.06,1.5,1.19,0.03,">1 nonsynonymous","S36M A81L D98V P177K",4
"lib1","SARS-CoV-2","TGATACGCGAAGGAAC",6,49.79,6,-4.76,0.77,1.5,1.22,0.01,">1 nonsynonymous","S164I F185R",2
"lib1","SARS-CoV-2","TGATACGCTCTTTAAA",4,40.06,10.6,-0.16,0.06,2.81,1.09,0,">1 nonsynonymous","T85M D90R",2
"lib1","SARS-CoV-2","TGATACGGACAACATT",2,1.18,NA,NA,NA,NA,NA,NA,"stop","L5* Y39R P96* Q168G",4
"lib1","SARS-CoV-2","TGATACGTACATATAT",5,53.97,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12I G86T A105K",3
"lib1","SARS-CoV-2","TGATACGTCAGAACAA",10,3.48,NA,NA,NA,NA,NA,NA,"stop","V65L Q84* L95V C150E G166L T201R",6
"lib1","SARS-CoV-2","TGATACTAAGTCCAAA",2,35.1,10.67,-0.09,0.04,2.96,1.03,0,">1 nonsynonymous","P149V V153G",2
"lib1","SARS-CoV-2","TGATACTAATTAATTG",1,1.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106Q",1
"lib1","SARS-CoV-2","TGATACTCACCCTTCA",5,139.88,10.41,-0.35,0.05,2.89,1.01,0,">1 nonsynonymous","G9R T85M",2
"lib1","SARS-CoV-2","TGATACTGCTCGCGGT",3,48.23,9.74,-1.03,0.09,2.18,1.13,0,">1 nonsynonymous","R27L D90T K128I",3
"lib1","SARS-CoV-2","TGATAGAAAAAAAAAC",2,45.46,10.7,-0.06,0.07,2.81,1.15,0,">1 nonsynonymous","K132M T148R",2
"lib1","SARS-CoV-2","TGATAGAAACGTGAAA",1,1.02,NA,NA,NA,NA,NA,NA,"stop","Y50S Q84* D97L D112A",4
"lib1","SARS-CoV-2","TGATAGAAATATATAA",5,74.37,6.15,-4.61,0.84,1.5,1.2,0.02,">1 nonsynonymous","P161K P177V",2
"lib1","SARS-CoV-2","TGATAGAAGTCTGAGC",1,8.33,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","F12E F47M N120L",3
"lib1","SARS-CoV-2","TGATAGACGATAGGGT",4,36.37,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","N13L V52L A81R Y119T",4
"lib1","SARS-CoV-2","TGATAGAGCGACCCAC",1,146.53,6.32,-4.45,0.36,1.5,1.18,0.01,">1 nonsynonymous","F12L V37R A89L",3
"lib1","SARS-CoV-2","TGATAGATTTACCATG",6,81.59,10.45,-0.31,0.04,2.94,1.03,0,"1 nonsynonymous","T148P",1
"lib1","SARS-CoV-2","TGATAGCAGATGAATC",1,15.32,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","K48L P96S N107L",3
"lib1","SARS-CoV-2","TGATAGCCAAAGTGAG",1,24.06,10.74,-0.02,0.05,2.92,1.05,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","TGATAGCCGGAGGGAG",3,34.62,10.63,-0.13,0.06,2.83,1.13,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TGATAGCGTAAAAAGT",11,115.08,10.2,-0.56,0.06,2.78,1.06,0,">1 nonsynonymous","A145P N171Y",2
"lib1","SARS-CoV-2","TGATAGCTCAGTTAAA",2,126.3,6.93,-3.84,0.18,1.5,1.11,0.01,">1 nonsynonymous","I104V Y159R",2
"lib1","SARS-CoV-2","TGATAGGAAGTAAAGA",6,32.71,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C49D I88W",2
"lib1","SARS-CoV-2","TGATAGGGGCCAATTA",3,121.05,6,-4.76,2,3,1.19,0,">1 nonsynonymous","F62I A89Y N107F G146F C158E P169N",6
"lib1","SARS-CoV-2","TGATAGGTAGATGCAC",2,55.81,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S43Q R78H K94C Y165Q K198L T201S",6
"lib1","SARS-CoV-2","TGATAGGTGAATTGGT",5,13.67,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","S45N A81T D90T Y119T T140K P149N",6
"lib1","SARS-CoV-2","TGATAGGTGCAGGCCA",3,46.77,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N64T I80T T170Y",3
"lib1","SARS-CoV-2","TGATAGTAATTATTAG",2,25.3,10.48,-0.28,0.11,2.84,1.12,0.01,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TGATAGTCCATGGAAA",3,13.04,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","N30Y K56T F99S K132R",4
"lib1","SARS-CoV-2","TGATAGTCTGTTCGGG",15,98.94,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R16C P82Y",2
"lib1","SARS-CoV-2","TGATAGTTACGAGCTG",1,20.54,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","G83F G101N Y119F I138N Y165M G172A",6
"lib1","SARS-CoV-2","TGATAGTTATCAAGGA",4,30.08,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","D112R N171R",2
"lib1","SARS-CoV-2","TGATAGTTATGTAACG",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S D112S Q144S",3
"lib1","SARS-CoV-2","TGATATAAACTTGAGA",1,15.09,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","E10L I104V S139C A145D K199R",5
"lib1","SARS-CoV-2","TGATATAACAATGGGG",6,55.4,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39I A89L G101I Y121I R127L I142T",6
"lib1","SARS-CoV-2","TGATATAAGAAAATAT",2,6.88,10.69,-0.07,0.17,2.89,1,0.01,">1 nonsynonymous","R16S T148L",2
"lib1","SARS-CoV-2","TGATATAAGTGTACTT",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K N157R G174Q",3
"lib1","SARS-CoV-2","TGATATAATCGCATTT",3,0,NA,NA,NA,NA,NA,NA,"stop","N1F A89P A105* Y119G G155I T170* Y178G",7
"lib1","SARS-CoV-2","TGATATAATCTATCCG",1,25,9.94,-0.83,0.08,2.99,1,0,">1 nonsynonymous","T3V N30H F126H",3
"lib1","SARS-CoV-2","TGATATAATGTATTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35W K56* N64T N157H",4
"lib1","SARS-CoV-2","TGATATACAAATGTCA",7,39.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T K94Q T100A",3
"lib1","SARS-CoV-2","TGATATACTTACCGAA",2,22.28,9.16,-1.61,0.25,1.62,1.22,0.04,"1 nonsynonymous","P82L",1
"lib1","SARS-CoV-2","TGATATAGGCTAGCTG",10,1.16,NA,NA,NA,NA,NA,NA,"stop","S113W N157*",2
"lib1","SARS-CoV-2","TGATATAGTGCCGAAT",8,150.86,9.75,-1.02,0.1,2.24,1.06,0,">1 nonsynonymous","L5N L60E Y123Q N151Y K199M",5
"lib1","SARS-CoV-2","TGATATATGGACCTAA",1,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L38P",2
"lib1","SARS-CoV-2","TGATATATTTAGACCA",12,103.8,9.1,-1.67,0.2,1.5,1.06,0.02,">1 nonsynonymous","R78L F99H",2
"lib1","SARS-CoV-2","TGATATCAACAAAAAT",1,25.08,10.85,0.09,0.1,2.93,1.02,0,"1 nonsynonymous","S36K",1
"lib1","SARS-CoV-2","TGATATCAAGGAGGAG",4,55.9,9.12,-1.64,0.19,1.64,1.15,0.01,">1 nonsynonymous","P96I K199N",2
"lib1","SARS-CoV-2","TGATATCAAGTCTAAT",2,26.57,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","T55S D68R D97L W106C E141R",5
"lib1","SARS-CoV-2","TGATATCCACCCCATT",5,76.49,10.37,-0.4,0.06,2.89,1.02,0,">1 nonsynonymous","K48N D98N V103I P149L",4
"lib1","SARS-CoV-2","TGATATCCCTGTATAC",8,104.95,10.77,0.01,0.06,2.91,1.06,0,">1 nonsynonymous","C61R S164A",2
"lib1","SARS-CoV-2","TGATATCGCCGCATTC",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A89R G174L",3
"lib1","SARS-CoV-2","TGATATCGTTTAAATC",4,91.77,10.67,-0.1,0.05,2.95,1.02,0,">1 nonsynonymous","E10A F62A S129R",3
"lib1","SARS-CoV-2","TGATATCTCAGTATGT",4,27.68,6.16,-4.6,0.39,1.5,1.07,0.01,">1 nonsynonymous","C102D N130A",2
"lib1","SARS-CoV-2","TGATATCTCTGCGACT",2,32.21,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F17T V77Q A89S G101C",4
"lib1","SARS-CoV-2","TGATATCTTTATATAC",12,30.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R25L C61S Y91L N110G L125P",5
"lib1","SARS-CoV-2","TGATATGAAGTTCTAC",10,97.47,10.72,-0.05,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATATGATTCATTTA",2,35.21,10.59,-0.17,0.09,2.81,1.13,0,">1 nonsynonymous","V20P Y35L K48D",3
"lib1","SARS-CoV-2","TGATATGCTAACTAAT",4,17.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R25G N30M V65K G86V T140Q V180M",6
"lib1","SARS-CoV-2","TGATATGGAGACGTAA",4,58.64,9.02,-1.74,0.08,2.9,1.08,0,">1 nonsynonymous","Y35V L57M D90N Y119M",4
"lib1","SARS-CoV-2","TGATATGTAATCAGCA",5,19.79,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","F44R A67N V103Y L125I",4
"lib1","SARS-CoV-2","TGATATGTTATTGTTA",3,60.58,10.84,0.08,0.09,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATATTAAATAAACC",4,15.1,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V77G G86N",2
"lib1","SARS-CoV-2","TGATATTAGAAATCTC",8,102.47,8.8,-1.96,0.07,1.86,1.08,0,">1 nonsynonymous","C61V T85E W106R T170S L188P",5
"lib1","SARS-CoV-2","TGATATTCCTTGCATG",1,117.86,8.29,-2.47,0.14,2.54,1.08,0.01,"1 nonsynonymous","Q176D",1
"lib1","SARS-CoV-2","TGATATTCGAATAAAC",3,47.25,8.66,-2.1,0.12,1.79,1.15,0.01,">1 nonsynonymous","Y35K L111S",2
"lib1","SARS-CoV-2","TGATATTGAACGAATC",5,94.34,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A14R R25G G86N L111H R136N",5
"lib1","SARS-CoV-2","TGATATTTCAGCGAGG",6,99.01,9.47,-1.29,0.04,2.87,1.05,0,">1 nonsynonymous","K128S T170N",2
"lib1","SARS-CoV-2","TGATCAAAAGGAAAAG",3,51.44,10.73,-0.04,0.06,2.95,1.02,0,"1 nonsynonymous","T201D",1
"lib1","SARS-CoV-2","TGATCAAAATTCAAAC",1,23.55,9.39,-1.37,0.09,2.74,1.14,0,">1 nonsynonymous","T3G T55C G116L L122Y S200Y",5
"lib1","SARS-CoV-2","TGATCAAATATACAAT",10,224.44,9.19,-1.57,0.07,2.82,1.09,0,">1 nonsynonymous","Q168L K199N",2
"lib1","SARS-CoV-2","TGATCAAATGGCGCGG",3,116.08,10.74,-0.02,0.09,2.84,1.1,0,">1 nonsynonymous","S36I S43P L122S",3
"lib1","SARS-CoV-2","TGATCAAGACGCTGTG",7,0.26,NA,NA,NA,NA,NA,NA,"stop","A14W P149*",2
"lib1","SARS-CoV-2","TGATCAAGCTATAGTT",1,9.51,10.63,-0.13,0.11,2.84,1.09,0,">1 nonsynonymous","D98T V115D",2
"lib1","SARS-CoV-2","TGATCAATACTAAGTC",5,76.79,8.75,-2.01,0.09,2.9,1.06,0,">1 nonsynonymous","D59T N157E",2
"lib1","SARS-CoV-2","TGATCAATTATCCAAG",3,1.41,NA,NA,NA,NA,NA,NA,"stop","S36V N64A A105S G155* F160S",5
"lib1","SARS-CoV-2","TGATCACAAGGAGATT",3,81.45,10.82,0.05,0.1,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATCACACGACACTA",13,218.4,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y39I L60A N118F P177L L188N",5
"lib1","SARS-CoV-2","TGATCACACTAGATAA",1,15.69,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D97I R136V Y165Q",3
"lib1","SARS-CoV-2","TGATCACAGAGGATCC",1,12.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95P D112G P149N V173T",4
"lib1","SARS-CoV-2","TGATCACATTTCTACA",3,12.97,6,-4.76,2,1.5,1.18,0.07,">1 nonsynonymous","I88R F99W F156R",3
"lib1","SARS-CoV-2","TGATCACGTCATTACA",1,21.78,8.38,-2.39,0.13,2.93,1.07,0.01,">1 nonsynonymous","N64A S129E G166E",3
"lib1","SARS-CoV-2","TGATCACTAACGTTGA",2,25.18,10.16,-0.6,0.1,2.6,1.01,0,">1 nonsynonymous","R25S F160S",2
"lib1","SARS-CoV-2","TGATCACTTCAATATA",4,26.34,10.8,0.03,0.06,2.9,1.02,0,"1 nonsynonymous","P54V",1
"lib1","SARS-CoV-2","TGATCAGAGTTCGACG",4,71.75,10.66,-0.11,0.08,2.89,1.11,0,">1 nonsynonymous","V37S D90M",2
"lib1","SARS-CoV-2","TGATCAGGAACTAACG",2,10.03,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P54F Y66C L95M W106L V180M",5
"lib1","SARS-CoV-2","TGATCAGGACATTTTA",2,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88C W106Y G155L",3
"lib1","SARS-CoV-2","TGATCAGGACCTGTAA",8,190.54,10.76,-0.01,0.08,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATCATAAGATTCAC",1,43.29,10.64,-0.12,0.07,2.92,1.01,0,">1 nonsynonymous","Y91F G116Q",2
"lib1","SARS-CoV-2","TGATCATACTATTTAT",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I G146K",2
"lib1","SARS-CoV-2","TGATCATAGAAAACGA",10,140.05,10.76,0,0.06,2.88,1.08,0,"1 nonsynonymous","S200G",1
"lib1","SARS-CoV-2","TGATCATCACATAACT",1,7.91,10.85,0.08,0.2,2.65,1.29,0.01,">1 nonsynonymous","N1Q P197R",2
"lib1","SARS-CoV-2","TGATCATCCTATAAAA",2,64.24,10.66,-0.1,0.04,2.9,1.03,0,">1 nonsynonymous","A18E K128P",2
"lib1","SARS-CoV-2","TGATCATCTTTCACTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F D59L G86F L122C V173T",5
"lib1","SARS-CoV-2","TGATCATGCCATGTAA",2,22.79,9.64,-1.12,0.25,1.5,1,0.03,"1 nonsynonymous","I88Q",1
"lib1","SARS-CoV-2","TGATCATGGGTGACCT",2,19.73,8.47,-2.3,0.25,2.08,1.21,0.03,">1 nonsynonymous","P7K A14C Y119I",3
"lib1","SARS-CoV-2","TGATCATTCCAACCAC",5,62.96,10.82,0.06,0.06,2.9,1.04,0,"1 nonsynonymous","T3E",1
"lib1","SARS-CoV-2","TGATCATTTTAGGTTT",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60E Q84Y",2
"lib1","SARS-CoV-2","TGATCATTTTTAAAAA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N Y91F K132C E154F Y175V",5
"lib1","SARS-CoV-2","TGATCCAAACAAAACA",1,10.74,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N58P Q144E R179V",3
"lib1","SARS-CoV-2","TGATCCAAACTGCATC",3,90.15,10.12,-0.64,0.1,2.45,1.02,0,">1 nonsynonymous","S45T V77L P133F",3
"lib1","SARS-CoV-2","TGATCCAATGTAAAAG",11,99.07,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S36W T100N K128Y C158T G166D",5
"lib1","SARS-CoV-2","TGATCCACAAGAGGAC",2,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N W106Y Q144T",3
"lib1","SARS-CoV-2","TGATCCACACATATCC",1,15.16,10.35,-0.42,0.13,2.63,1.12,0.01,">1 nonsynonymous","Y35W K48L N107K S164K T201A",5
"lib1","SARS-CoV-2","TGATCCACCTATACCT",3,26.71,6,-4.76,2,1.5,1.22,0.04,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","TGATCCAGAACCATGT",3,19.35,8.19,-2.57,0.3,1.5,1.06,0.03,">1 nonsynonymous","R16P L60Q D97Y F134D",4
"lib1","SARS-CoV-2","TGATCCAGCTAGGCCA",2,24.81,10.98,0.22,0.07,2.91,1,0,"1 nonsynonymous","L188M",1
"lib1","SARS-CoV-2","TGATCCAGCTGTGGCA",2,32.06,7.65,-3.11,0.17,1.5,1.1,0.01,">1 nonsynonymous","A105R L125N",2
"lib1","SARS-CoV-2","TGATCCAGGGTGCCGA",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95D L122A",2
"lib1","SARS-CoV-2","TGATCCAGTATCGCAT",4,0,NA,NA,NA,NA,NA,NA,"stop","D90* N171L",2
"lib1","SARS-CoV-2","TGATCCCCTGAATTGA",3,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V20M V115C T140I",4
"lib1","SARS-CoV-2","TGATCCCCTTGGTCTA",3,56.13,10.45,-0.32,0.04,2.89,1,0,">1 nonsynonymous","L60V L122V K128V",3
"lib1","SARS-CoV-2","TGATCCCGCAAGTAAT",1,32.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27P T100N N107S R127C Q168V",5
"lib1","SARS-CoV-2","TGATCCGAAACCAGGA",3,27.02,7.3,-3.47,0.39,1.5,1.09,0.06,"1 nonsynonymous","I80T",1
"lib1","SARS-CoV-2","TGATCCGAACGAAATT",5,104.14,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y119L F134E G172I",3
"lib1","SARS-CoV-2","TGATCCGCTTGCCGTT",2,29.45,6,-4.76,2,1.5,1.19,0.04,"1 nonsynonymous","F167I",1
"lib1","SARS-CoV-2","TGATCCGTAATAACAA",1,1.82,NA,NA,NA,NA,NA,NA,"stop","F44W L95T W106*",3
"lib1","SARS-CoV-2","TGATCCGTCCGGGTGA",1,9.69,6,-4.76,2,1.5,1.15,0.07,"1 nonsynonymous","V103F",1
"lib1","SARS-CoV-2","TGATCCTAAAATTTGT",2,59.59,10.81,0.04,0.07,2.88,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATCCTAGCGACCCC",8,78.59,6.04,-4.72,1.48,1.5,1.26,0.04,">1 nonsynonymous","N4T R27M Y121V Y178L",4
"lib1","SARS-CoV-2","TGATCCTAGCGTTAAT",4,44.81,8.18,-2.59,0.12,2.33,1.06,0.01,">1 nonsynonymous","S113P N120Q",2
"lib1","SARS-CoV-2","TGATCCTGGCGACATA",5,49.38,9.79,-0.98,0.14,2.31,1.11,0.01,">1 nonsynonymous","N24T N64T K114I P133F",4
"lib1","SARS-CoV-2","TGATCCTTGATTTAGG",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D L57K",2
"lib1","SARS-CoV-2","TGATCGAACAGATATC",13,175.89,10.73,-0.03,0.07,2.87,1.05,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TGATCGAAGAAGAGTG",6,43.62,9.1,-1.67,0.22,1.5,1.03,0.02,"1 nonsynonymous","C49S",1
"lib1","SARS-CoV-2","TGATCGATACTAGGCC",4,18.37,6,-4.76,1.14,1.5,1.06,0.01,">1 nonsynonymous","A14L V77F N107H E141Q",4
"lib1","SARS-CoV-2","TGATCGATGATATTAA",3,45.19,6.94,-3.83,0.24,1.5,1.16,0.01,">1 nonsynonymous","C6N R136F V173R K198E",4
"lib1","SARS-CoV-2","TGATCGATGCAGTCAT",2,56.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","A14L F44S G117N S139F",4
"lib1","SARS-CoV-2","TGATCGCATATTGTAA",2,19.44,8.7,-2.07,0.25,1.5,1.13,0.04,">1 nonsynonymous","K87N K128L E135W V173F K199M",5
"lib1","SARS-CoV-2","TGATCGCCATGTATTT",7,32.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L A81M D90V T100H S113T",5
"lib1","SARS-CoV-2","TGATCGCCCTACTGTC",1,5.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86T S139G",2
"lib1","SARS-CoV-2","TGATCGCGTGTCATCT",1,30.94,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5Q V103C P133I Y178E T201C",5
"lib1","SARS-CoV-2","TGATCGCTAAATAGGA",10,37.02,10.67,-0.09,0.06,2.84,1.03,0,">1 nonsynonymous","D97N T140L",2
"lib1","SARS-CoV-2","TGATCGCTTCCAAACT",5,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M S41V C102D",3
"lib1","SARS-CoV-2","TGATCGGATCTAAACA",3,4.95,NA,NA,NA,NA,NA,NA,"stop","S36L I104N E141G G166*",4
"lib1","SARS-CoV-2","TGATCGGCCAGCGGTA",2,51.67,9.64,-1.13,0.14,2.02,1.07,0.01,">1 nonsynonymous","N58K E135D G152Y",3
"lib1","SARS-CoV-2","TGATCGGGAGGGTAAG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","A14* V71L G166P",3
"lib1","SARS-CoV-2","TGATCGGGCACTTGAA",6,45.51,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C61N F99A C102N",3
"lib1","SARS-CoV-2","TGATCGGTACTCGGCA",1,9.56,6,-4.76,2,1.5,1.15,0.06,">1 nonsynonymous","Y93T N120V Y159F Y165H",4
"lib1","SARS-CoV-2","TGATCGGTCGATGTCT",7,107.26,10.77,0,0.04,2.91,1.01,0,">1 nonsynonymous","S41H V173M",2
"lib1","SARS-CoV-2","TGATCGTAAGCAATCA",2,12.21,10.73,-0.03,0.09,2.99,1,0,"1 nonsynonymous","K198D",1
"lib1","SARS-CoV-2","TGATCGTAGAGGACCG",1,10.29,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T55L R127V E141M",3
"lib1","SARS-CoV-2","TGATCGTTCAAGTAAA",4,112.51,9.9,-0.86,0.09,2.05,1.09,0,">1 nonsynonymous","K114W K128V V173C Y178N",4
"lib1","SARS-CoV-2","TGATCTAAAAATAACA",6,17.14,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","E10W C61A L162R",3
"lib1","SARS-CoV-2","TGATCTAACCGCAATA",15,189.15,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","F44P V103M I142M S184F",4
"lib1","SARS-CoV-2","TGATCTAATCTAATTT",1,21.97,10.23,-0.54,0.09,2.87,1,0,">1 nonsynonymous","S41V E154M",2
"lib1","SARS-CoV-2","TGATCTACACCGCAGC",2,11.77,10.65,-0.12,0.08,2.95,1.06,0,"1 nonsynonymous","K198S",1
"lib1","SARS-CoV-2","TGATCTACCATCTCCA",16,160.19,10.63,-0.13,0.03,2.91,1.06,0,">1 nonsynonymous","L5Q F44W L60W K199T",4
"lib1","SARS-CoV-2","TGATCTACGGGCCTTA",4,34.72,6.48,-4.28,0.39,1.5,1.19,0.01,">1 nonsynonymous","R73K G83E R136W E141K K198T",5
"lib1","SARS-CoV-2","TGATCTAGAGAAACAG",1,29.58,10.33,-0.44,0.09,2.73,1.05,0,">1 nonsynonymous","Y91N G174S",2
"lib1","SARS-CoV-2","TGATCTAGGATTTCAT",4,20.27,9.58,-1.19,0.21,1.7,1.15,0.02,">1 nonsynonymous","F12P S43K",2
"lib1","SARS-CoV-2","TGATCTAGTACAAGGA",4,20.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30C C49K G86R W106F F156R",5
"lib1","SARS-CoV-2","TGATCTATCGCAATAG",1,25.9,10.68,-0.09,0.05,2.92,1.08,0,">1 nonsynonymous","I2G V37Y",2
"lib1","SARS-CoV-2","TGATCTCTACCTGTGC",1,6.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P82M A89S P133S",3
"lib1","SARS-CoV-2","TGATCTTAAAATAACA",1,11.67,7.68,-3.08,0.38,1.5,1.08,0.05,">1 nonsynonymous","F8N Y119N N130M E141N",4
"lib1","SARS-CoV-2","TGATCTTAAAGGACCG",1,20.14,8.6,-2.16,0.21,2.21,1.16,0.02,">1 nonsynonymous","D90E G155L C195K",3
"lib1","SARS-CoV-2","TGATCTTAACATTCGA",4,62.99,9.97,-0.79,0.09,1.79,1.1,0,">1 nonsynonymous","G9Y F44R D90R K114Y",4
"lib1","SARS-CoV-2","TGATCTTAGTCATATA",4,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L A14S K56L S184Y",4
"lib1","SARS-CoV-2","TGATCTTATTCTGCAG",6,93.78,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F17W C49P",2
"lib1","SARS-CoV-2","TGATCTTTATAGTCCG",7,173,9.8,-0.97,0.07,2.45,1.06,0,">1 nonsynonymous","G116S R136L F160R",3
"lib1","SARS-CoV-2","TGATCTTTCCATTCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K G152L",2
"lib1","SARS-CoV-2","TGATGAAAACACTTTT",4,84.99,10.74,-0.02,0.09,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATGAAAACCTCCGA",9,1.45,NA,NA,NA,NA,NA,NA,"stop","Y21S I88*",2
"lib1","SARS-CoV-2","TGATGAAAACGAATAA",4,110.27,8.78,-1.98,0.15,2.3,1.08,0.01,">1 nonsynonymous","N64P Q176S",2
"lib1","SARS-CoV-2","TGATGAAAGGTAGATA",3,88.27,10.56,-0.2,0.06,2.79,1.05,0,">1 nonsynonymous","D90E P149R",2
"lib1","SARS-CoV-2","TGATGAACAATTGAAT",2,30.07,8.68,-2.09,0.24,2.22,1.04,0.03,">1 nonsynonymous","A81V I138L Y143I",3
"lib1","SARS-CoV-2","TGATGAACGAAGAAGT",2,17.47,6,-4.76,1.17,1.5,1.09,0.02,">1 nonsynonymous","S19V D137A",2
"lib1","SARS-CoV-2","TGATGAAGTACCCTGA",6,58.58,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","G51F L95S",2
"lib1","SARS-CoV-2","TGATGAATCATTAATC",2,14.12,6,-4.76,2,1.5,1.23,0.06,">1 nonsynonymous","G83C A105L S113N",3
"lib1","SARS-CoV-2","TGATGAATCTTAAGTT",5,46.68,7.3,-3.47,0.37,1.5,1.2,0.04,">1 nonsynonymous","T15E N64F N107R K128N P177F R179K T201E",7
"lib1","SARS-CoV-2","TGATGAATGTTCAACA",5,93.19,9.96,-0.8,0.08,2.41,1.07,0,">1 nonsynonymous","D34G T148F",2
"lib1","SARS-CoV-2","TGATGACAAGTGCATG",3,60.19,10.74,-0.03,0.06,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TGATGACCAATAGATA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","E10* C61S F70L I142T S164I",5
"lib1","SARS-CoV-2","TGATGACCTACTGTCG",8,75.97,10.43,-0.34,0.06,2.86,1,0,">1 nonsynonymous","L5D F44G I142V",3
"lib1","SARS-CoV-2","TGATGACGCTAGATAG",1,0.06,NA,NA,NA,NA,NA,NA,"stop","E10* L38K C195L",3
"lib1","SARS-CoV-2","TGATGACGTTAACGAT",12,60.43,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","D98C C150F F167L",3
"lib1","SARS-CoV-2","TGATGACTGACAGCTA",2,167.31,9.55,-1.22,0.07,2.67,1.11,0,"1 nonsynonymous","P177S",1
"lib1","SARS-CoV-2","TGATGACTTTGAGAAG",1,80.61,10.12,-0.65,0.11,2.37,1.07,0,"1 nonsynonymous","I88M",1
"lib1","SARS-CoV-2","TGATGAGCCTTAATCT",7,1.2,NA,NA,NA,NA,NA,NA,"stop","V20L F134* Y178N",3
"lib1","SARS-CoV-2","TGATGATAGACATGCG",14,5.96,NA,NA,NA,NA,NA,NA,"stop","G117L Y143*",2
"lib1","SARS-CoV-2","TGATGATATGACTTCA",2,11.9,6.17,-4.59,0.88,3,1.04,0,">1 nonsynonymous","N1I P96V F134I",3
"lib1","SARS-CoV-2","TGATGATCCAACTTAG",1,25.18,10.82,0.05,0.11,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATGATCGTGGAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20P K56T F70K N107S",4
"lib1","SARS-CoV-2","TGATGATGGTAAGCCG",10,102.46,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","T55I G83S K94T L162T",4
"lib1","SARS-CoV-2","TGATGATTACACAACC",4,39.3,8.68,-2.08,0.24,1.5,1.24,0.02,">1 nonsynonymous","Y35G S139I",2
"lib1","SARS-CoV-2","TGATGATTCTATTCTT",8,85.26,6,-4.76,2,3,1.18,0,">1 nonsynonymous","Y91S Y121K F134A",3
"lib1","SARS-CoV-2","TGATGCAACACATTTA",15,341.67,10.76,-0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATGCAACAGAATAC",2,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7F Y121F P149W",3
"lib1","SARS-CoV-2","TGATGCAATTATTATA",1,9.54,9.91,-0.85,0.26,2.34,1.09,0.02,">1 nonsynonymous","G51D T63H P197Q T201Q",4
"lib1","SARS-CoV-2","TGATGCAGAACTGCCC",2,23.92,9.14,-1.62,0.18,1.5,1.1,0.01,"1 nonsynonymous","V180F",1
"lib1","SARS-CoV-2","TGATGCAGTTTTACAC",11,131.85,8.58,-2.19,0.1,2.56,1.04,0,">1 nonsynonymous","Q84K T100R N157M",3
"lib1","SARS-CoV-2","TGATGCATACCTGTAA",7,28.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41T V77P",2
"lib1","SARS-CoV-2","TGATGCCAATAACAAA",5,116.9,10.55,-0.22,0.04,2.89,1.07,0,"1 nonsynonymous","P96S",1
"lib1","SARS-CoV-2","TGATGCCAATAATATA",3,54.08,10.17,-0.59,0.08,2.77,1.05,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","TGATGCCACTTCAATA",3,23.81,8.49,-2.27,0.18,2.9,1,0.01,">1 nonsynonymous","E154L N157H",2
"lib1","SARS-CoV-2","TGATGCCCATTATAAG",6,71.38,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A14S N30G N40Y N58T G86L Y175I",6
"lib1","SARS-CoV-2","TGATGCGACCACAATA",3,28.33,6,-4.76,2,1.5,1.21,0.06,">1 nonsynonymous","G86E T140C Y175S",3
"lib1","SARS-CoV-2","TGATGCGTCCACTTAA",3,8.4,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","N13M K26F K56N N92L Y165W",5
"lib1","SARS-CoV-2","TGATGCTAGTCCACAA",11,192.46,8.59,-2.17,0.07,2.61,1.05,0,">1 nonsynonymous","Y119L N151P",2
"lib1","SARS-CoV-2","TGATGCTGGACATACA",5,99.24,10.75,-0.02,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATGCTTCAGTCAGT",2,12.32,8.61,-2.16,0.21,1.88,1.06,0.03,">1 nonsynonymous","Y39R R127L",2
"lib1","SARS-CoV-2","TGATGCTTTACCGCGT",3,15.48,6.04,-4.73,0.97,3,1.29,0.01,">1 nonsynonymous","L57I Y91V Y123T",3
"lib1","SARS-CoV-2","TGATGCTTTTATCATA",2,44.46,10.53,-0.24,0.05,2.89,1,0,">1 nonsynonymous","T85G K128M",2
"lib1","SARS-CoV-2","TGATGGAACATCCTAA",3,66.31,10.74,-0.03,0.03,2.93,1.02,0,"1 nonsynonymous","Q168R",1
"lib1","SARS-CoV-2","TGATGGACTTTCCGTT",3,14.13,10.68,-0.08,0.13,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATGGATATAGCGGT",2,38.57,8.46,-2.3,0.13,2.1,1.08,0.01,">1 nonsynonymous","Y35K K87H N118C",3
"lib1","SARS-CoV-2","TGATGGATTCTTAGGC",5,78.02,10.18,-0.58,0.05,2.84,1.03,0,">1 nonsynonymous","D34S V173C",2
"lib1","SARS-CoV-2","TGATGGCCCGGAGTTA",1,56.95,10.04,-0.72,0.09,2.62,1.07,0,">1 nonsynonymous","N24V V71L",2
"lib1","SARS-CoV-2","TGATGGCGGCTATTAT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","N1* Y35K T100S E141I G166*",5
"lib1","SARS-CoV-2","TGATGGCGGTATGGGA",2,51.7,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K87A W106T Y121G",3
"lib1","SARS-CoV-2","TGATGGGAAGCACACA",8,55.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86R D137S T170M",3
"lib1","SARS-CoV-2","TGATGGGGCGCCTTGC",5,38.47,7.74,-3.03,0.39,1.5,1,0.05,">1 nonsynonymous","A33R D97Q Y178L",3
"lib1","SARS-CoV-2","TGATGGGGGTAACCGT",1,14.9,8.94,-1.82,0.14,1.7,1.18,0.01,">1 nonsynonymous","A14G Y66M G116Y P149E",4
"lib1","SARS-CoV-2","TGATGGTAATTCCGGA",4,115,9.02,-1.74,0.07,2.58,1.12,0,">1 nonsynonymous","F126I F134C",2
"lib1","SARS-CoV-2","TGATGGTATGGCCATG",6,126.96,10.06,-0.7,0.06,2.56,1.02,0,">1 nonsynonymous","N4K I80M I138T",3
"lib1","SARS-CoV-2","TGATGGTGAAGATCAA",3,20.62,9.94,-0.83,0.09,1.99,1.08,0,">1 nonsynonymous","I80L E135M",2
"lib1","SARS-CoV-2","TGATGGTTAAAACCCA",4,5.56,NA,NA,NA,NA,NA,0.47,">1 nonsynonymous","R27Q C61V P82K P96F V181R",5
"lib1","SARS-CoV-2","TGATGGTTCTTACATG",2,23.73,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G86S W106V V115F A192L",4
"lib1","SARS-CoV-2","TGATGTAAGAGAACGT",2,12.49,7.01,-3.76,0.59,1.5,1.09,0.08,"1 nonsynonymous","L183S",1
"lib1","SARS-CoV-2","TGATGTAAGCAAAATA",1,18.73,10.72,-0.04,0.07,2.95,1.02,0,"1 nonsynonymous","S200N",1
"lib1","SARS-CoV-2","TGATGTAATAAAGATT",5,3.4,NA,NA,NA,NA,NA,NA,"stop","T15L A42L A67T L95* F185S",5
"lib1","SARS-CoV-2","TGATGTACATTCTATG",5,184.98,10.23,-0.53,0.05,2.79,1.03,0,">1 nonsynonymous","F44L S53G",2
"lib1","SARS-CoV-2","TGATGTACGGAATTTA",6,53.03,6,-4.76,2,3,1.09,0,">1 nonsynonymous","I2G S19K D34Q G101F P133S A192T",6
"lib1","SARS-CoV-2","TGATGTACTAGTAGGA",1,3.2,NA,NA,NA,NA,NA,NA,"stop","I2* T15N W23A P169T T201L",5
"lib1","SARS-CoV-2","TGATGTATAAAATATC",6,8.16,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Q84I R124G F160N V173P",4
"lib1","SARS-CoV-2","TGATGTATTACAGTCA",13,219.85,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N120Y D137Q I142A Q176M",4
"lib1","SARS-CoV-2","TGATGTCCATCTGCGT",1,39.69,9.51,-1.25,0.17,2.04,1.12,0.01,">1 nonsynonymous","N107A P149W",2
"lib1","SARS-CoV-2","TGATGTCGCAATCATC",4,22.2,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F8L D90L R124G",3
"lib1","SARS-CoV-2","TGATGTCGTTTCGGGT",1,9.49,10.18,-0.59,0.14,2.8,1,0.01,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","TGATGTCTTCATCCAA",1,5.53,6,-4.76,2,1.5,1.02,0.01,"1 nonsynonymous","Y93N",1
"lib1","SARS-CoV-2","TGATGTCTTGTGAACA",4,26.86,10.04,-0.72,0.1,2.81,1.03,0.01,">1 nonsynonymous","D97S Y143W",2
"lib1","SARS-CoV-2","TGATGTGACAGGCCAG",1,26.34,9.32,-1.45,0.28,2.13,1.01,0.04,">1 nonsynonymous","N13H G117P",2
"lib1","SARS-CoV-2","TGATGTGACTTAGTAG",1,13.86,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","K56I G74L A89L L125V",4
"lib1","SARS-CoV-2","TGATGTGCGCCTAACT",15,274.75,8.8,-1.97,0.12,1.74,1.14,0.01,">1 nonsynonymous","C6K V37Q F44L P149H",4
"lib1","SARS-CoV-2","TGATGTGTTTACACGA",5,63.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A22P F134D T140P F167I",4
"lib1","SARS-CoV-2","TGATGTTAACTCGAAG",2,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C C49I K56W I104L",4
"lib1","SARS-CoV-2","TGATGTTATAACTAGC",1,25.13,8.51,-2.25,0.21,2.58,1.04,0.02,">1 nonsynonymous","N64K K87Y G117Y S147Y",4
"lib1","SARS-CoV-2","TGATGTTCATGTAACC",1,7.84,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6S S36F S53K P96L",4
"lib1","SARS-CoV-2","TGATGTTGTTAACCAA",5,212.14,10.12,-0.64,0.07,2.56,1.05,0,">1 nonsynonymous","N4M N13S",2
"lib1","SARS-CoV-2","TGATGTTTATCGAGAA",12,157.19,10.85,0.09,0.08,2.9,1.05,0,">1 nonsynonymous","V37L S147P",2
"lib1","SARS-CoV-2","TGATGTTTGAAACAAA",5,44.18,7.59,-3.17,0.26,1.5,1.16,0.02,">1 nonsynonymous","F156K L183T",2
"lib1","SARS-CoV-2","TGATGTTTTAGTGGAA",8,54.03,6.11,-4.65,0.81,1.5,1.16,0.01,">1 nonsynonymous","K48L V182G",2
"lib1","SARS-CoV-2","TGATTAAAAAATTTTA",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S P96S L131M S139H P161Q",5
"lib1","SARS-CoV-2","TGATTAAAACTTACCA",4,20.09,7.04,-3.73,0.52,1.5,1,0.08,">1 nonsynonymous","S36V D90P",2
"lib1","SARS-CoV-2","TGATTAAAAGATGTTT",3,13.62,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","T15A N40P D98L N107D L122D",5
"lib1","SARS-CoV-2","TGATTAAACCGGTCTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","TGATTAAACGAATATG",1,19.32,9.19,-1.57,0.09,2.22,1.15,0,">1 nonsynonymous","Q84L K114S G155M",3
"lib1","SARS-CoV-2","TGATTAAATAACTCTT",4,31.01,8.17,-2.6,0.13,2.29,1.17,0.01,"1 nonsynonymous","Y143G",1
"lib1","SARS-CoV-2","TGATTAACATAATTCT",1,34.03,10.5,-0.27,0.08,2.89,1.1,0,"1 nonsynonymous","G152T",1
"lib1","SARS-CoV-2","TGATTAAGGCAGTTGA",4,31.17,9.45,-1.31,0.11,2,1.11,0.01,">1 nonsynonymous","T15L D97Q P149I G155S",4
"lib1","SARS-CoV-2","TGATTAATCTTTTTTC",4,2.24,NA,NA,NA,NA,NA,NA,"stop","N30L V115H L122* F134M",4
"lib1","SARS-CoV-2","TGATTAATGCACAATA",2,36.9,10.43,-0.34,0.06,2.92,1.04,0,">1 nonsynonymous","N120L Q163R",2
"lib1","SARS-CoV-2","TGATTAATTAATTAGC",2,74.66,10.82,0.06,0.07,2.92,1.02,0,"1 nonsynonymous","N130H",1
"lib1","SARS-CoV-2","TGATTACACATGGACC",12,81.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86E P96Y",2
"lib1","SARS-CoV-2","TGATTACATCCCCTCC",2,53.9,10.75,-0.02,0.04,2.94,1.04,0,"1 nonsynonymous","Y66T",1
"lib1","SARS-CoV-2","TGATTACATGACTGCA",2,17.67,6,-4.76,2,3,1.08,0,">1 nonsynonymous","D68L P133A",2
"lib1","SARS-CoV-2","TGATTACATGTTTGGA",2,31.74,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","I28E T100S P191I",3
"lib1","SARS-CoV-2","TGATTACGAGACGAAA",1,20.22,10.76,0,0.12,2.94,1.06,0.01,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","TGATTACGCGAAGCTG",12,134.1,10.36,-0.4,0.03,2.89,1.08,0,">1 nonsynonymous","T15N V77L K199C",3
"lib1","SARS-CoV-2","TGATTACGGACCCACT",5,29.83,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6K K26R Y50K F156I",4
"lib1","SARS-CoV-2","TGATTACTAGAATCGT",1,11.31,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F44N D68E R136F",3
"lib1","SARS-CoV-2","TGATTACTAGAATGGA",16,154.84,6.48,-4.28,0.53,1.5,1.28,0.03,">1 nonsynonymous","G9F A22D S45L Y121S P197T",5
"lib1","SARS-CoV-2","TGATTACTTAAGTTAA",5,92.55,6.21,-4.55,0.71,1.5,1.24,0.02,">1 nonsynonymous","K94V R136L",2
"lib1","SARS-CoV-2","TGATTACTTCTATCTG",1,21.49,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","G9V V37F C61V K94N I104G V115F",6
"lib1","SARS-CoV-2","TGATTAGACCAATATA",4,50.41,9.36,-1.4,0.28,1.76,1.11,0.04,">1 nonsynonymous","N1H Y178K",2
"lib1","SARS-CoV-2","TGATTAGACTTACATT",2,26.11,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","C6R S19P V32L R73W Y119L V173A",6
"lib1","SARS-CoV-2","TGATTAGATAGCCACA",3,36.96,9.4,-1.37,0.14,2.35,1.21,0.01,">1 nonsynonymous","D34A G174R",2
"lib1","SARS-CoV-2","TGATTAGCTGAGGATA",3,1.22,NA,NA,NA,NA,NA,NA,"stop","N4S V77E R127* P149R P161T Y165M",6
"lib1","SARS-CoV-2","TGATTAGCTTTCAATA",1,15,10.81,0.04,0.09,2.98,1,0,">1 nonsynonymous","P7N L95M",2
"lib1","SARS-CoV-2","TGATTAGGAAGCGGTA",8,80.92,10.69,-0.07,0.05,2.88,1.02,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TGATTAGGACTTGCCA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","C31L V37L Q84M D90* F185N",5
"lib1","SARS-CoV-2","TGATTAGTGGCGGACT",2,4.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","TGATTATAAACACTAT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","C6* P96G V103N F126*",4
"lib1","SARS-CoV-2","TGATTATGAATGACCA",3,14.09,7.64,-3.13,0.23,1.5,1.2,0.02,">1 nonsynonymous","F8L A14P G155L",3
"lib1","SARS-CoV-2","TGATTATGTGAACCAC",1,6.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L G86S G174V A192L",4
"lib1","SARS-CoV-2","TGATTATTCTCTTGTT",3,34.47,10.13,-0.63,0.06,2.93,1,0,">1 nonsynonymous","C6G S29N",2
"lib1","SARS-CoV-2","TGATTCAAATCAATTT",4,48.16,9.8,-0.96,0.19,1.87,1.08,0.01,">1 nonsynonymous","N1F N13D F62P",3
"lib1","SARS-CoV-2","TGATTCAAATCTTTAA",5,1.77,NA,NA,NA,NA,NA,NA,"stop","V11G I28V F62I F99Y Y121* K128T F134*",7
"lib1","SARS-CoV-2","TGATTCAAGCACAGTT",2,16.38,10.74,-0.02,0.11,2.93,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGATTCAATATATCCT",2,70.14,10.34,-0.43,0.05,2.97,1.04,0,"1 nonsynonymous","F156V",1
"lib1","SARS-CoV-2","TGATTCACAACACTGA",4,12.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D59M Q168G L183S",3
"lib1","SARS-CoV-2","TGATTCACGAGACATG",4,31.1,6.26,-4.51,0.52,1.5,1.08,0.02,">1 nonsynonymous","I2S P82V W106T P149T R179V",5
"lib1","SARS-CoV-2","TGATTCACGCCCGCTT",5,66.44,10.23,-0.53,0.04,2.91,1.03,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","TGATTCAGGGACGTAC",3,78.96,10.73,-0.03,0.09,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATTCAGTTTTGTAT",2,15.14,6.06,-4.71,0.76,1.5,1.15,0.01,">1 nonsynonymous","E10L Y35A P96H Y121F G155Y",5
"lib1","SARS-CoV-2","TGATTCATATGAAACG",2,20.18,10.83,0.06,0.09,2.83,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TGATTCCACCCAGCAA",4,52.94,10.74,-0.03,0.05,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATTCCAGAGGGCGG",7,216.6,9.07,-1.69,0.05,2.84,1.09,0,">1 nonsynonymous","N120S F126Y",2
"lib1","SARS-CoV-2","TGATTCCAGGTAACCT",5,7.57,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","V103G G174V",2
"lib1","SARS-CoV-2","TGATTCCCATGCGAGA",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T Y66Q Y119S",3
"lib1","SARS-CoV-2","TGATTCCCTCCCAGAA",6,93.18,10.9,0.13,0.07,2.88,1.07,0,">1 nonsynonymous","Y91F Y123F",2
"lib1","SARS-CoV-2","TGATTCCTCCTAATAC",2,40.38,6.01,-4.75,0.96,1.5,1.19,0.02,">1 nonsynonymous","E141R N151V N157V R179Y F185K",5
"lib1","SARS-CoV-2","TGATTCCTTCTACGGA",3,56.3,9.91,-0.86,0.11,2.46,1.02,0,">1 nonsynonymous","S53L G116P Y123A",3
"lib1","SARS-CoV-2","TGATTCGAAGCCAAAA",3,23.22,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6R E135W Q168L",3
"lib1","SARS-CoV-2","TGATTCGGCTACTTTA",3,57.15,10.6,-0.16,0.08,2.89,1.08,0,"1 nonsynonymous","R27H",1
"lib1","SARS-CoV-2","TGATTCGTAACGCAAA",4,66.08,9.96,-0.8,0.07,2.83,1.01,0,"1 nonsynonymous","Y121A",1
"lib1","SARS-CoV-2","TGATTCGTTTTGATAA",11,144.96,6.05,-4.71,1.17,1.5,1.18,0.03,">1 nonsynonymous","V103T N120L Q176V P197E",4
"lib1","SARS-CoV-2","TGATTCTATGTTCAAA",5,13.08,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N1L V103N",2
"lib1","SARS-CoV-2","TGATTCTGACCTAAAC",1,14.42,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y35R D68L G83T",3
"lib1","SARS-CoV-2","TGATTCTGCGTTGGCT",2,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G R16S N58L N92L V173S",5
"lib1","SARS-CoV-2","TGATTCTTCGCAAAGA",2,6.9,6,-4.76,2,3,1.14,0.03,">1 nonsynonymous","F12L Y93S C158D G172E",4
"lib1","SARS-CoV-2","TGATTGAAACATACCG",17,10.59,NA,NA,NA,NA,NA,NA,"stop","G51R Y91F D98M N107* E141V P161Q",6
"lib1","SARS-CoV-2","TGATTGAAAGTGAAAC",2,7.16,6.42,-4.34,2,1.5,1.22,0.03,">1 nonsynonymous","C49V T63S F167I",3
"lib1","SARS-CoV-2","TGATTGAAATAAGATG",1,21.54,8.24,-2.52,0.2,1.94,1.11,0.02,">1 nonsynonymous","K87A Y165L",2
"lib1","SARS-CoV-2","TGATTGACCACAGAAA",2,10.54,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","A33L N58E Y121E I142M",4
"lib1","SARS-CoV-2","TGATTGACGGACTCGT",1,8.49,8.59,-2.18,0.19,1.5,1.04,0.01,">1 nonsynonymous","K26A V52T P161G K198S",4
"lib1","SARS-CoV-2","TGATTGACTGTGAATA",1,5.7,6.53,-4.23,2,1.5,1.07,0.04,">1 nonsynonymous","F44R Y50K V103P",3
"lib1","SARS-CoV-2","TGATTGAGGCCGAATC",10,184.36,8.41,-2.36,0.1,2.81,1.07,0,">1 nonsynonymous","Y119R N157Q",2
"lib1","SARS-CoV-2","TGATTGATAGGCATGA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","R27C V115* G116E T201S",4
"lib1","SARS-CoV-2","TGATTGATATACCAAT",3,45.37,10.72,-0.04,0.09,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATTGATATCTCCGC",1,9.09,6.4,-4.37,2,3,1.18,0.01,">1 nonsynonymous","Y50C T100L I104T F160A",4
"lib1","SARS-CoV-2","TGATTGCACACAGGGT",2,4.85,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib1","SARS-CoV-2","TGATTGCAGAAATTAG",5,34.25,8.88,-1.88,0.14,1.77,1.16,0.01,">1 nonsynonymous","Y91T N120M",2
"lib1","SARS-CoV-2","TGATTGCGAGGCACTT",1,19.5,8.83,-1.93,0.24,1.63,1.24,0.02,">1 nonsynonymous","F12N T85S",2
"lib1","SARS-CoV-2","TGATTGCGTAGTCGAT",4,81.52,10.71,-0.05,0.06,2.93,1.03,0,"1 nonsynonymous","I138A",1
"lib1","SARS-CoV-2","TGATTGCTCCGTAGGT",2,44.05,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K56V F62T Y91V F99D F126G",5
"lib1","SARS-CoV-2","TGATTGGAAGCTATAT",4,130.22,10.59,-0.17,0.05,2.91,1.06,0,"1 nonsynonymous","G152L",1
"lib1","SARS-CoV-2","TGATTGGCACCCTGCC",6,74.54,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","F8T W106L K132I G174K",4
"lib1","SARS-CoV-2","TGATTGGCGTGAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D98L L162* V173K",3
"lib1","SARS-CoV-2","TGATTGTAGTCACAAA",8,127.22,10.17,-0.6,0.05,2.8,1.04,0,"1 nonsynonymous","T15F",1
"lib1","SARS-CoV-2","TGATTGTATCGTATAA",6,13.27,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S29L C102H N157L Q168W",4
"lib1","SARS-CoV-2","TGATTTAAACAACCAA",1,16.29,10.4,-0.37,0.1,2.91,1,0.01,"1 nonsynonymous","F156M",1
"lib1","SARS-CoV-2","TGATTTAAAGGTGGTC",6,2.16,NA,NA,NA,NA,NA,NA,"stop","R16* A192D",2
"lib1","SARS-CoV-2","TGATTTAACTAAAAAA",4,56.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L95M R136F T148G F160I",4
"lib1","SARS-CoV-2","TGATTTAAGACCTTAC",5,74.22,8.33,-2.43,0.21,1.8,1.15,0.02,"1 nonsynonymous","S139P",1
"lib1","SARS-CoV-2","TGATTTAAGCTCCCTC",5,85.99,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","P7Y N118P R124V Y159T",4
"lib1","SARS-CoV-2","TGATTTAAGTAAGCAT",7,356.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F12T T140H T148A N157R P197F",5
"lib1","SARS-CoV-2","TGATTTAATCCATTAA",1,16.4,6,-4.76,2,1.5,1.33,0.04,">1 nonsynonymous","V11S S69K K132R",3
"lib1","SARS-CoV-2","TGATTTACGAGTTCTA",2,15.33,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C61S T85R L131P L183C",4
"lib1","SARS-CoV-2","TGATTTACGTACCAAA",3,16.2,7.38,-3.38,0.47,1.5,1.01,0.07,">1 nonsynonymous","R27E G86M Y121K I138M A145T L162P K198G",7
"lib1","SARS-CoV-2","TGATTTACTAGTTAGT",3,343.47,10.38,-0.38,0.04,2.88,1.01,0,"1 nonsynonymous","A14M",1
"lib1","SARS-CoV-2","TGATTTACTCTTCAAA",4,101.03,10.85,0.09,0.06,2.93,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TGATTTAGCTTGTAAG",7,170.7,10.83,0.07,0.08,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATTTATCCACGATT",4,61.5,10.84,0.08,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGATTTATTTATACGA",4,104.39,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K48W D59Y N107V N120T N151C F156Y",6
"lib1","SARS-CoV-2","TGATTTCAAAGGATAT",1,15.41,9.47,-1.3,0.28,1.66,1.16,0.02,">1 nonsynonymous","F12S F44T T100F",3
"lib1","SARS-CoV-2","TGATTTCAATCGCTGC",4,22.72,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","Y35I N64C F70L V103Y",4
"lib1","SARS-CoV-2","TGATTTGAACAACACT",4,0.62,NA,NA,NA,NA,NA,NA,"stop","N120D E135W G174*",3
"lib1","SARS-CoV-2","TGATTTGAGCAAAATT",1,8.95,7.25,-3.51,0.45,1.71,1.12,0.04,">1 nonsynonymous","S43N P54Y V180S",3
"lib1","SARS-CoV-2","TGATTTGCACATTCAG",2,6.74,10.25,-0.51,0.08,2.76,1,0,">1 nonsynonymous","G83S I104V G146A",3
"lib1","SARS-CoV-2","TGATTTGTACCGTAGC",4,12.69,8.51,-2.26,0.33,1.5,1.07,0.05,">1 nonsynonymous","F12Y T85I S129I",3
"lib1","SARS-CoV-2","TGATTTGTCCTCAGTG",2,16.1,6.47,-4.29,0.4,1.5,1.12,0.02,">1 nonsynonymous","C6H V180H",2
"lib1","SARS-CoV-2","TGATTTTATATATAAC",1,55.85,10.02,-0.74,0.11,2.05,1.05,0.01,">1 nonsynonymous","T3L C31L T55R L122I",4
"lib1","SARS-CoV-2","TGATTTTCGAATTCCA",2,24.09,10.67,-0.09,0.06,2.99,1,0,"1 nonsynonymous","L60W",1
"lib1","SARS-CoV-2","TGATTTTCTAAGTCAG",6,53.47,9.26,-1.5,0.16,1.5,1.13,0.01,">1 nonsynonymous","D34S T100M N110Y Q144R P191F",5
"lib1","SARS-CoV-2","TGATTTTGAAAAGCCA",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118F K198Y",2
"lib1","SARS-CoV-2","TGATTTTGGAAGTTGT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","K48L L131* G146S G152N L183A",5
"lib1","SARS-CoV-2","TGATTTTGTCTCCCAG",2,0.33,NA,NA,NA,NA,NA,NA,"stop","G9H T15S S41W A81* G146R G155S T170D",7
"lib1","SARS-CoV-2","TGATTTTTAAACACAA",5,80.23,8.52,-2.25,0.24,1.5,1.1,0.03,"1 nonsynonymous","D68W",1
"lib1","SARS-CoV-2","TGATTTTTAGTTCAAG",9,2.05,NA,NA,NA,NA,NA,NA,"stop","N4C I28* L57* S139L G146C F160T",6
"lib1","SARS-CoV-2","TGATTTTTCGGAAAAC",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I S184P",2
"lib1","SARS-CoV-2","TGCAAAAAAAACTATG",2,49.73,10.65,-0.11,0.08,2.91,1.02,0,"1 nonsynonymous","S129M",1
"lib1","SARS-CoV-2","TGCAAAAAAAATGGCT",3,10.93,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","R73T P161L",2
"lib1","SARS-CoV-2","TGCAAAAACACCTCTA",1,11.23,6,-4.76,2,3,1.04,0,">1 nonsynonymous","G86L E154N",2
"lib1","SARS-CoV-2","TGCAAAAACCACCTTC",1,26.5,10.85,0.09,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAAAAACCGTGGGG",2,22.65,10.06,-0.71,0.12,2.26,1.06,0,">1 nonsynonymous","G9R L57R",2
"lib1","SARS-CoV-2","TGCAAAAACTCTCAGC",2,27.64,10.13,-0.63,0.12,2.44,1.04,0.01,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","TGCAAAAAGTGTATTA",2,25.42,10.41,-0.35,0.05,2.85,1.08,0,">1 nonsynonymous","A33L D97T P149H",3
"lib1","SARS-CoV-2","TGCAAAAATCACCATT",4,40.33,8.5,-2.27,0.26,1.83,1.13,0.02,">1 nonsynonymous","C31H F44I S113T",3
"lib1","SARS-CoV-2","TGCAAAAATCACCGCC",1,13.77,6,-4.76,2,3,1.02,0,">1 nonsynonymous","N1T Y39S G117P G152F Y175G",5
"lib1","SARS-CoV-2","TGCAAAAATCGATTCA",1,25.45,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F17A A22V R127L",3
"lib1","SARS-CoV-2","TGCAAAAATGATGACC",4,1.18,NA,NA,NA,NA,NA,NA,"stop","K48I T100* K198F",3
"lib1","SARS-CoV-2","TGCAAAAATTAAACAC",2,94.94,9.34,-1.42,0.1,2.63,1.1,0,">1 nonsynonymous","W106M L125M P169H",3
"lib1","SARS-CoV-2","TGCAAAACTTTTAGCA",7,48.19,9.35,-1.42,0.12,1.99,1.09,0.01,">1 nonsynonymous","N107R N120C",2
"lib1","SARS-CoV-2","TGCAAAAGACATGATG",2,31.17,10.78,0.01,0.06,2.98,1,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","TGCAAAAGAGTACTAA",3,12.21,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","D68E P96L",2
"lib1","SARS-CoV-2","TGCAAAAGTGTTCAGA",8,147.28,8.27,-2.49,0.13,1.92,1.1,0.01,">1 nonsynonymous","A22E K94V Y119N",3
"lib1","SARS-CoV-2","TGCAAAAGTTTACATA",5,31.08,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","G51P L60Y V77Y D112F K198Q",5
"lib1","SARS-CoV-2","TGCAAAATAAGTAACG",1,5.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35I T55L V71K S184Q",4
"lib1","SARS-CoV-2","TGCAAAATACAGTCCA",2,99.06,9.15,-1.62,0.06,2.94,1.06,0,"1 nonsynonymous","G146K",1
"lib1","SARS-CoV-2","TGCAAAATATCAATAC",2,9.58,6.42,-4.35,1.01,1.5,1.21,0.08,">1 nonsynonymous","D97R E141K V153L Y159D V181R C195F",6
"lib1","SARS-CoV-2","TGCAAAATTCGCTACT",6,71.44,8.91,-1.85,0.2,1.53,1.18,0.02,">1 nonsynonymous","S45E T55L G86S V153F",4
"lib1","SARS-CoV-2","TGCAAACAACTTCGAT",3,6.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","TGCAAACAGAGAATAA",7,1.68,NA,NA,NA,NA,NA,NA,"stop","L95D L122* I138V G146D V181Y",5
"lib1","SARS-CoV-2","TGCAAACAGGGCACTA",8,104.97,9.07,-1.7,0.07,2.79,1.12,0,">1 nonsynonymous","G146K T201M",2
"lib1","SARS-CoV-2","TGCAAACATATGTTTT",2,62.09,10.05,-0.71,0.09,2.46,1.03,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","TGCAAACATGGGGTAC",2,2.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","TGCAAACCGCGCTGGT",10,41.94,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","Y66C A105L D112N Y119E E135V K199I",6
"lib1","SARS-CoV-2","TGCAAACGGCGGGACT",4,26.87,8.81,-1.95,0.2,1.97,1.16,0.03,">1 nonsynonymous","A33P D75W N130F",3
"lib1","SARS-CoV-2","TGCAAACGGGCTTTGG",7,82.3,10.65,-0.12,0.05,2.95,1,0,">1 nonsynonymous","V32L D97L A192S K198C",4
"lib1","SARS-CoV-2","TGCAAAGAAAAAATTG",1,14.17,7.49,-3.28,0.45,1.5,1.11,0.06,">1 nonsynonymous","I28R D98E P169R T201E",4
"lib1","SARS-CoV-2","TGCAAAGAACAAATGT",2,10.41,10.73,-0.04,0.3,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAAAGAATGGACTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92W V103D G117S",3
"lib1","SARS-CoV-2","TGCAAAGCCGTACACC",8,421.82,7.22,-3.54,0.13,1.83,1.14,0,">1 nonsynonymous","N4T S41G Y175E P197D",4
"lib1","SARS-CoV-2","TGCAAAGGACACGGAT",3,0.39,NA,NA,NA,NA,NA,NA,"stop","C49* A89G",2
"lib1","SARS-CoV-2","TGCAAAGTAGATGGTA",4,33.77,8.43,-2.34,0.29,1.5,1.22,0.03,">1 nonsynonymous","V37A F44L K94V",3
"lib1","SARS-CoV-2","TGCAAAGTATAGCCAA",2,1.2,NA,NA,NA,NA,NA,NA,"stop","A14T Y39L P54T C61S N118Q F167M Y178*",7
"lib1","SARS-CoV-2","TGCAAAGTATGCCCGT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35* P82N G116L S164M",4
"lib1","SARS-CoV-2","TGCAAATACGTGATAA",4,117.72,10.6,-0.16,0.05,2.92,1.04,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","TGCAAATACTGTTAGT",1,11.35,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","N40M I88Y T148S T201H",4
"lib1","SARS-CoV-2","TGCAAATAGAGTCTAA",15,7678.73,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K56N Q84R A89R D97A F167L Y178S",6
"lib1","SARS-CoV-2","TGCAAATATAGAATAA",1,63.07,10.63,-0.13,0.06,2.86,1.11,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","TGCAAATCAGGCAAAG",3,0.48,NA,NA,NA,NA,NA,NA,"stop","C6N N110* P177T",3
"lib1","SARS-CoV-2","TGCAAATGAAAGAAAG",3,61.58,10.87,0.1,0.09,2.89,1.07,0,">1 nonsynonymous","T85H H189D",2
"lib1","SARS-CoV-2","TGCAAATGGCCAGGTT",3,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S F70Y I88W Y165R",4
"lib1","SARS-CoV-2","TGCAAATGTAATCCAA",2,17.41,10.56,-0.21,0.08,3,1,0,">1 nonsynonymous","F44D T100L",2
"lib1","SARS-CoV-2","TGCAAATGTTGCCACT",16,160.2,10.81,0.04,0.08,2.9,1.06,0,">1 nonsynonymous","T3H I28Y",2
"lib1","SARS-CoV-2","TGCAAATTAGAGAGAT",5,128.38,10.17,-0.6,0.06,2.65,1.01,0,">1 nonsynonymous","D98L E141Y",2
"lib1","SARS-CoV-2","TGCAAATTAGGGTTAT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","G9L S41*",2
"lib1","SARS-CoV-2","TGCAAATTGAAAGTAA",1,17.28,8.43,-2.33,0.2,1.5,1.05,0.01,">1 nonsynonymous","Y35E N64P I138P",3
"lib1","SARS-CoV-2","TGCAAATTGAGTGATA",7,33.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49V T55V K87V N107L P149N",5
"lib1","SARS-CoV-2","TGCAAATTTAAGGGTC",1,21.38,8.31,-2.45,0.15,2.2,1.08,0.01,">1 nonsynonymous","P7A F47L Y119C",3
"lib1","SARS-CoV-2","TGCAAATTTATACATT",9,197.89,10.76,-0.01,0.07,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAACAAACCAACCA",4,71.12,10.63,-0.13,0.07,2.92,1.01,0,"1 nonsynonymous","N58T",1
"lib1","SARS-CoV-2","TGCAACAACCATTCTT",1,7.37,6.78,-3.98,0.73,1.5,1.06,0.03,">1 nonsynonymous","L5Y Y66T G86R T148F",4
"lib1","SARS-CoV-2","TGCAACAACGAAGATG",2,17.2,9.28,-1.48,0.21,1.5,1.1,0.02,">1 nonsynonymous","P96V V194A",2
"lib1","SARS-CoV-2","TGCAACAATACCGCAT",1,97.63,8.81,-1.96,0.12,1.9,1.14,0,">1 nonsynonymous","T3G N107D N120S",3
"lib1","SARS-CoV-2","TGCAACAATTATAAGT",2,27.04,10.43,-0.33,0.13,2.71,1.04,0.01,"1 nonsynonymous","G116H",1
"lib1","SARS-CoV-2","TGCAACACATTCCCTT",5,0.71,NA,NA,NA,NA,NA,NA,"stop","C49M P96*",2
"lib1","SARS-CoV-2","TGCAACACGCACATTG",12,62.45,6,-4.76,2,1.5,1.45,0.08,">1 nonsynonymous","D97L D112L C150Q P161H",4
"lib1","SARS-CoV-2","TGCAACACTAACAAAC",3,37.87,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A42T V103C S139Q L183V T201W",5
"lib1","SARS-CoV-2","TGCAACAGAACAGTAA",5,46.57,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","I2V L5V Y66K V77S D98S W106V G152T R179L",8
"lib1","SARS-CoV-2","TGCAACCAATGCAAAA",3,13.89,9.09,-1.67,0.17,2.77,1.14,0.01,">1 nonsynonymous","S41L N58H F156M H189Y",4
"lib1","SARS-CoV-2","TGCAACCACATGTACT",2,73.54,10.55,-0.22,0.04,2.87,1.04,0,">1 nonsynonymous","K56R L60D",2
"lib1","SARS-CoV-2","TGCAACCACCTCATCG",1,1.35,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib1","SARS-CoV-2","TGCAACCATACTAGCG",4,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L C61Y I104H",3
"lib1","SARS-CoV-2","TGCAACCATTGACTCT",5,37.29,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I28E L60P D112Y",3
"lib1","SARS-CoV-2","TGCAACCCAATGTTGG",3,29.75,6.67,-4.1,0.5,1.5,1.02,0.04,">1 nonsynonymous","P149H G172T",2
"lib1","SARS-CoV-2","TGCAACCCATCTACAC",3,33.97,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","Y39S C49M W106G",3
"lib1","SARS-CoV-2","TGCAACCCGGATATTA",4,62.34,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N107H F156M G174V",3
"lib1","SARS-CoV-2","TGCAACCCTACTCCGT",3,59.25,10.88,0.11,0.07,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAACGGTGAATCAT",5,75.55,10.67,-0.09,0.05,2.96,1.03,0,"1 nonsynonymous","R78S",1
"lib1","SARS-CoV-2","TGCAACGTCGCAGCGA",1,14.62,10.02,-0.75,0.17,1.91,1.04,0.01,"1 nonsynonymous","I80C",1
"lib1","SARS-CoV-2","TGCAACTAACGATTCA",4,48.28,9.78,-0.99,0.09,2.46,1.03,0,">1 nonsynonymous","S19D F134G S184R",3
"lib1","SARS-CoV-2","TGCAACTAATGAAGAA",8,2.16,NA,NA,NA,NA,NA,NA,"stop","N92*",1
"lib1","SARS-CoV-2","TGCAACTAATTGAAAC",2,32.3,10.65,-0.11,0.09,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAACTGGAATAATA",1,18.05,8.63,-2.14,0.09,1.93,1.06,0.01,">1 nonsynonymous","A42M Q84D K128I",3
"lib1","SARS-CoV-2","TGCAACTGGTGCGGCT",1,78.61,10.77,0.01,0.05,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAACTTACGCGCTA",1,14.49,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33P Y91G N107C N151I",4
"lib1","SARS-CoV-2","TGCAACTTACTAATGT",4,17.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6I V20M K128Y",3
"lib1","SARS-CoV-2","TGCAACTTATGGTCGA",1,8.53,6.75,-4.01,0.49,1.5,1.1,0.06,">1 nonsynonymous","I80A Q84K I138L",3
"lib1","SARS-CoV-2","TGCAACTTCCCTTACG",6,86.03,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F62S E76A Y159T",3
"lib1","SARS-CoV-2","TGCAACTTTCGATATT",4,51.97,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","L38D P96D E141C Q176K",4
"lib1","SARS-CoV-2","TGCAAGAAAATTAACC",5,45,6,-4.76,2,3,1.18,0,">1 nonsynonymous","P7M V20M R27L P54Y F62C L122V I138M I142V T170Y",9
"lib1","SARS-CoV-2","TGCAAGAAACAATAAT",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L T55N A145C",3
"lib1","SARS-CoV-2","TGCAAGAAAGTTTATG",12,8.08,7.09,-3.67,0.44,2.19,1.13,0.04,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","TGCAAGAATGAGGACT",8,47.08,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","V71M G86R V173D",3
"lib1","SARS-CoV-2","TGCAAGACTAGATTTA",6,63.76,7.04,-3.72,0.33,1.5,1.06,0.02,">1 nonsynonymous","A22V I28R",2
"lib1","SARS-CoV-2","TGCAAGAGTATAAAAA",10,39.75,8.62,-2.15,0.25,1.5,1.08,0.03,"1 nonsynonymous","G86K",1
"lib1","SARS-CoV-2","TGCAAGCCATATGCGT",9,69.4,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G9R K48S G83V Y121K K128N R136P",6
"lib1","SARS-CoV-2","TGCAAGCCCCTCTCAC",1,99.89,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E141W Y165A Y178K",3
"lib1","SARS-CoV-2","TGCAAGCCGTCAAGAT",1,15.18,6,-4.76,1.36,3,1.13,0.01,">1 nonsynonymous","S19T A105L L183Y",3
"lib1","SARS-CoV-2","TGCAAGGCGTACGCGT",4,0.83,NA,NA,NA,NA,NA,NA,"stop","S29L F44Y G83* S129W F167L",5
"lib1","SARS-CoV-2","TGCAAGGGGACCCGAA",2,23.65,6,-4.76,1.04,3,1.16,0.01,">1 nonsynonymous","F70V G83F G146R Q163Y F167I",5
"lib1","SARS-CoV-2","TGCAAGGTACAACCCA",3,59.05,9.34,-1.42,0.06,2.81,1.15,0,"1 nonsynonymous","G166C",1
"lib1","SARS-CoV-2","TGCAAGTACGATAAAA",8,59.68,10.7,-0.07,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAAGTAGTAATAGA",3,76.39,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V32F A81Y R127Q S184Y",4
"lib1","SARS-CoV-2","TGCAAGTCGACCGTAT",2,496.34,10.7,-0.07,0.04,2.94,1.02,0,">1 nonsynonymous","S43R E135D",2
"lib1","SARS-CoV-2","TGCAAGTGCACACCGT",3,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33H G51I S164D T201A",4
"lib1","SARS-CoV-2","TGCAAGTTTGTAGAAA",6,8.43,NA,NA,NA,NA,NA,NA,"stop","A14K V65* G155C",3
"lib1","SARS-CoV-2","TGCAAGTTTTAGAAAG",1,7.75,6,-4.76,2,3,1.02,0,">1 nonsynonymous","I88K R124V",2
"lib1","SARS-CoV-2","TGCAATAACGAAATCC",2,29.78,10.59,-0.18,0.28,2.1,1.01,0.04,"1 nonsynonymous","Y66L",1
"lib1","SARS-CoV-2","TGCAATACATATACCC",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G F70H V115Y E141S S147L",5
"lib1","SARS-CoV-2","TGCAATACCGGCCGAA",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107K G155F",2
"lib1","SARS-CoV-2","TGCAATACGGAGCTTT",3,73.54,10.54,-0.23,0.04,2.95,1,0,"1 nonsynonymous","A67I",1
"lib1","SARS-CoV-2","TGCAATACGTGTCTAC",2,41.38,10.35,-0.41,0.11,2.76,1,0.01,"1 nonsynonymous","F12V",1
"lib1","SARS-CoV-2","TGCAATATAGACCATC",1,33.42,8.1,-2.66,0.2,1.71,1.05,0.02,">1 nonsynonymous","L38T F44N V173N",3
"lib1","SARS-CoV-2","TGCAATATATAAGAAA",1,19.08,6.89,-3.87,0.51,1.5,1.16,0.04,">1 nonsynonymous","S19V F62M N130Y",3
"lib1","SARS-CoV-2","TGCAATATCTCATACG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y D137G",2
"lib1","SARS-CoV-2","TGCAATATTCCGGGAT",2,15.15,9.46,-1.3,0.25,1.5,1.03,0.02,">1 nonsynonymous","Y39E P54L A89I G146A",4
"lib1","SARS-CoV-2","TGCAATCAAAGTTTAA",4,37.13,9.61,-1.15,0.15,1.81,1.12,0.01,">1 nonsynonymous","N58M I88L K132M",3
"lib1","SARS-CoV-2","TGCAATCAATTACAAA",4,104.12,10.83,0.06,0.05,2.92,1.03,0,"1 nonsynonymous","G51N",1
"lib1","SARS-CoV-2","TGCAATCAGGCTAACG",3,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M T100N A105L I138R",4
"lib1","SARS-CoV-2","TGCAATCCCTAATTAC",6,20.65,8.73,-2.03,0.27,1.9,1.11,0.05,">1 nonsynonymous","C61Y T85A V103D P197W",4
"lib1","SARS-CoV-2","TGCAATCCGTTTACCA",2,45.85,10.64,-0.12,0.07,2.87,1.1,0,">1 nonsynonymous","I2Y K132V",2
"lib1","SARS-CoV-2","TGCAATCCTGACAGTC",2,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P F47C R127V F134P T170I",5
"lib1","SARS-CoV-2","TGCAATCCTTATTTGT",1,23.87,9.7,-1.07,0.09,1.99,1.06,0.01,">1 nonsynonymous","A14S S36P F62P",3
"lib1","SARS-CoV-2","TGCAATCGTCAAGAGT",6,25.35,8.4,-2.37,0.33,1.5,1,0.04,"1 nonsynonymous","L95P",1
"lib1","SARS-CoV-2","TGCAATCTATCCTCAG",3,121.1,10.74,-0.02,0.07,2.92,1.05,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","TGCAATCTTATAGAGA",3,3.48,NA,NA,NA,NA,NA,NA,"stop","G86* D112M",2
"lib1","SARS-CoV-2","TGCAATGAATCTCAAT",6,111.98,10.7,-0.06,0.08,2.88,1.08,0,"1 nonsynonymous","L60Y",1
"lib1","SARS-CoV-2","TGCAATGAGCATTTCT",2,6.89,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","D68W N120H C150M",3
"lib1","SARS-CoV-2","TGCAATGAGCGAACTT",8,2.91,NA,NA,NA,NA,NA,NA,"stop","K48H K87C T148*",3
"lib1","SARS-CoV-2","TGCAATGAGCTGGGCT",9,69.34,8.44,-2.32,0.17,1.92,1.1,0.01,">1 nonsynonymous","N24V K114P K132I",3
"lib1","SARS-CoV-2","TGCAATGCAATACGGT",2,0.69,NA,NA,NA,NA,NA,NA,"stop","C102L L125S I138* T201L",4
"lib1","SARS-CoV-2","TGCAATGCACCAGACG",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R Y93S",2
"lib1","SARS-CoV-2","TGCAATGTATGGCTCG",1,15.33,8.62,-2.15,0.37,1.5,1.15,0.07,">1 nonsynonymous","E10K G51I",2
"lib1","SARS-CoV-2","TGCAATGTATTGATGT",12,170.73,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T15E Q168I G172P Q176L",4
"lib1","SARS-CoV-2","TGCAATTAACACAGCT",3,14.9,9.63,-1.14,0.39,1.58,1.1,0.07,">1 nonsynonymous","F8S E141L",2
"lib1","SARS-CoV-2","TGCAATTAGTTATTTC",7,42.65,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A81Y G86V Y93N F99T",4
"lib1","SARS-CoV-2","TGCAATTCCCAGATAG",1,11.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P I104K S164P",3
"lib1","SARS-CoV-2","TGCAATTGAACCCTTA",2,8.66,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W23F I80A S129W",3
"lib1","SARS-CoV-2","TGCAATTGGAATATGC",3,8.79,6.15,-4.61,1.06,1.81,1.1,0.02,">1 nonsynonymous","G9L K87C P96L",3
"lib1","SARS-CoV-2","TGCAATTTAAGCAAGT",5,32.73,6.06,-4.7,0.62,1.5,1.12,0.01,">1 nonsynonymous","S36V K56A G101E R127Q C150S",5
"lib1","SARS-CoV-2","TGCAATTTACCAATGA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","R16G K48* N110L E154S",4
"lib1","SARS-CoV-2","TGCAATTTGAAATCAG",2,32.49,6,-4.76,1.84,1.5,1.11,0.01,">1 nonsynonymous","Y93N F160L F167K S200C",4
"lib1","SARS-CoV-2","TGCAATTTTAGTTTCC",4,99.39,10.75,-0.01,0.06,2.87,1.07,0,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","TGCACAAAAATGCGGA",2,10.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F S19W R27L",3
"lib1","SARS-CoV-2","TGCACAAAATCTCGCC",4,0.19,NA,NA,NA,NA,NA,NA,"stop","G9T F17M V37L L60* G146C L187R T201L",7
"lib1","SARS-CoV-2","TGCACAAACCAGAAAC",3,79.58,9.17,-1.59,0.06,2.88,1.07,0,">1 nonsynonymous","A105T F126Y",2
"lib1","SARS-CoV-2","TGCACAAACTAAAACA",1,12.28,9.06,-1.7,0.13,1.96,1.08,0.01,">1 nonsynonymous","D98S P169W Y178N",3
"lib1","SARS-CoV-2","TGCACAAAGCATGCTT",2,4.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38S",1
"lib1","SARS-CoV-2","TGCACAAATCCTACTT",1,25.5,9.93,-0.84,0.19,2.16,1.03,0.02,"1 nonsynonymous","R136G",1
"lib1","SARS-CoV-2","TGCACAAATTAACCAC",1,13.97,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A81G A89F S200F",3
"lib1","SARS-CoV-2","TGCACAACAAGAAAAT",7,0.95,NA,NA,NA,NA,NA,NA,"stop","P82L F99G N107A K128D Y143*",5
"lib1","SARS-CoV-2","TGCACAACTAAAAGAA",2,13.44,7.47,-3.29,0.44,1.5,1.18,0.05,">1 nonsynonymous","R16F V103C",2
"lib1","SARS-CoV-2","TGCACAAGACTGAAAA",3,42.88,8.79,-1.98,0.22,1.61,1.19,0.02,">1 nonsynonymous","D90T T100I I138K S184L",4
"lib1","SARS-CoV-2","TGCACAAGTAACAAAA",19,141.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V11L A67C G83N C102W K114N",5
"lib1","SARS-CoV-2","TGCACAATAAATTACT",2,11.63,10.16,-0.6,0.12,2.89,1.03,0.01,">1 nonsynonymous","Y21V L60V",2
"lib1","SARS-CoV-2","TGCACAATAGCATGCT",11,369.26,9.63,-1.13,0.08,2.55,1.06,0,">1 nonsynonymous","A14V Y121L",2
"lib1","SARS-CoV-2","TGCACAATCATAAAGC",5,69.32,10.85,0.09,0.14,2.51,1.08,0.01,"1 nonsynonymous","S184I",1
"lib1","SARS-CoV-2","TGCACAATCGAAAACT",2,11.83,10.83,0.07,0.08,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCACACAGAACATTG",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H A42T N120S E141G",4
"lib1","SARS-CoV-2","TGCACACAGATTTAGT",1,11.68,6,-4.76,2,1.5,1.34,0.06,">1 nonsynonymous","F17T C102N",2
"lib1","SARS-CoV-2","TGCACACAGGCGCGAA",5,48.52,7.83,-2.93,0.25,1.5,1.12,0.02,">1 nonsynonymous","A14L D137S",2
"lib1","SARS-CoV-2","TGCACACCCCAACGAA",7,39.23,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","K94P Y123W",2
"lib1","SARS-CoV-2","TGCACACGCATGCTAC",2,16.58,10.06,-0.7,0.13,2.9,1,0.01,">1 nonsynonymous","P133A S164L",2
"lib1","SARS-CoV-2","TGCACACGTACCCCGT",6,109.64,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D59E Y165R G172R",3
"lib1","SARS-CoV-2","TGCACACTAAACTCGT",4,36.74,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","D34S R127C Y143R P169G Y175I",5
"lib1","SARS-CoV-2","TGCACACTCATACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","L111*",1
"lib1","SARS-CoV-2","TGCACACTTTATAGCA",2,39.49,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","Y39M G86H K94D D112K",4
"lib1","SARS-CoV-2","TGCACAGCAGGACATT",1,35.89,10.55,-0.21,0.07,2.94,1,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","TGCACAGTCATGATAA",4,81.5,10.11,-0.65,0.04,2.95,1,0,">1 nonsynonymous","T55G F156T",2
"lib1","SARS-CoV-2","TGCACAGTTGAAGAAA",1,30.32,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N4G C61K R127L G146V E154D",5
"lib1","SARS-CoV-2","TGCACATATCTAAAGT",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36T S113L L122V",3
"lib1","SARS-CoV-2","TGCACATCAGTAGGTG",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W F99P",2
"lib1","SARS-CoV-2","TGCACATCCCCTTATA",1,39.74,10.79,0.03,0.07,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCACATCTATTCGGT",2,9.23,10.1,-0.67,0.2,2.6,1.06,0.02,">1 nonsynonymous","S147Y T170Y",2
"lib1","SARS-CoV-2","TGCACATGGCTATATC",1,59.68,10.15,-0.61,0.09,2.69,1.03,0,">1 nonsynonymous","D98R R136H",2
"lib1","SARS-CoV-2","TGCACATTAAAAGGAA",8,126.49,10.76,-0.01,0.04,2.95,1.03,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","TGCACCAACCGAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* P96F C158W",3
"lib1","SARS-CoV-2","TGCACCACGCATTGAC",1,30.9,10.75,-0.01,0.05,2.96,1.01,0,"1 nonsynonymous","N1I",1
"lib1","SARS-CoV-2","TGCACCAGCAAGTTCT",2,16.33,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F8S D98P N107Q C158N K198M",5
"lib1","SARS-CoV-2","TGCACCAGTCTCGACC",1,11.52,10.73,-0.03,0.08,2.85,1.08,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","TGCACCATACCATATG",4,37.49,9.23,-1.54,0.19,1.63,1.17,0.01,">1 nonsynonymous","K48S V77T N110V",3
"lib1","SARS-CoV-2","TGCACCATAGCGTATA",6,5.96,NA,NA,NA,NA,NA,NA,"stop","C6V L95S G174P S200*",4
"lib1","SARS-CoV-2","TGCACCATATGTTTAA",1,65.07,10.83,0.07,0.04,2.98,1.01,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","TGCACCATTCCCTATG",1,25.38,8.54,-2.23,0.1,2.95,1.05,0,"1 nonsynonymous","N157L",1
"lib1","SARS-CoV-2","TGCACCCCTCCAATGG",1,20.49,10.78,0.02,0.06,2.98,1.02,0,">1 nonsynonymous","L5G V32Y T63K T85H",4
"lib1","SARS-CoV-2","TGCACCCGACCCTACA",3,0.62,NA,NA,NA,NA,NA,NA,"stop","P7* A18V Y165T Y178A K198S",5
"lib1","SARS-CoV-2","TGCACCGACACCGTTC",10,1095.43,9.37,-1.4,0.04,2.89,1.07,0,"1 nonsynonymous","Y119W",1
"lib1","SARS-CoV-2","TGCACCGGACCAATAA",2,11.75,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V103T N157Y",2
"lib1","SARS-CoV-2","TGCACCTAATAACCTA",3,31.12,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N92K N107Y L122T Q168R",4
"lib1","SARS-CoV-2","TGCACCTATAAAATAA",1,20.58,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S29M T46N V103R Y123T F160P",5
"lib1","SARS-CoV-2","TGCACCTCACATAAAA",2,16.02,10.91,0.15,0.08,2.85,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCACCTCCGACATTG",3,19.29,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T3Q K26L K48F A105L G172D",5
"lib1","SARS-CoV-2","TGCACCTCTATTGCCG",2,0.63,NA,NA,NA,NA,NA,NA,"stop","E10P D68R Y119* S147T",4
"lib1","SARS-CoV-2","TGCACCTGAGATCAAT",4,33.79,10.47,-0.29,0.06,2.9,1,0,">1 nonsynonymous","A33Y Q84K W106T",3
"lib1","SARS-CoV-2","TGCACCTTAATGGAGA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","Y39L V52T A89V S108C L125*",5
"lib1","SARS-CoV-2","TGCACGAATATGAATT",8,72.82,10.52,-0.24,0.05,2.85,1.07,0,">1 nonsynonymous","L5A P96S K199D",3
"lib1","SARS-CoV-2","TGCACGAGTATTATAG",3,27.46,10.29,-0.47,0.09,2.86,1.06,0,"1 nonsynonymous","G155W",1
"lib1","SARS-CoV-2","TGCACGATATCAGTCT",3,59.11,9.73,-1.03,0.09,2.51,1.09,0,">1 nonsynonymous","Y121W K128S K199M",3
"lib1","SARS-CoV-2","TGCACGCAATATATTA",4,45.32,10.6,-0.17,0.08,2.89,1.07,0,">1 nonsynonymous","G9N Y91N",2
"lib1","SARS-CoV-2","TGCACGCAGCACAACC",7,39.38,10.57,-0.2,0.05,2.91,1.04,0,"1 nonsynonymous","Y143H",1
"lib1","SARS-CoV-2","TGCACGCCGCGGCGGA",2,8.13,9.78,-0.99,0.12,2.83,1,0.01,">1 nonsynonymous","N120W G155R",2
"lib1","SARS-CoV-2","TGCACGCCGGGGATAA",1,9.82,9.74,-1.02,0.16,2.68,1.04,0.01,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","TGCACGCTGTCAAGGA",2,63.17,10.42,-0.34,0.04,2.95,1,0,">1 nonsynonymous","I2S K87M",2
"lib1","SARS-CoV-2","TGCACGGGCAAAACAC",2,28.49,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64H G101S R136C",3
"lib1","SARS-CoV-2","TGCACGTAACTATAAG",10,3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","TGCACGTACCACTTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3I F44* K94H T148N",4
"lib1","SARS-CoV-2","TGCACGTGACCTCAAG",1,22.84,7.73,-3.04,0.24,1.51,1.18,0.02,"1 nonsynonymous","R127I",1
"lib1","SARS-CoV-2","TGCACTAAAAAGCAAC",10,33.03,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","W23C V103A V182A K198A",4
"lib1","SARS-CoV-2","TGCACTAAAAGCTCGC",7,111.88,10.74,-0.03,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCACTAAATCACTGC",4,58.89,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","K87G Y123W F134N F160K V181W",5
"lib1","SARS-CoV-2","TGCACTAAGAGAAGCA",3,21.67,6,-4.76,2,3,1.04,0,">1 nonsynonymous","Y35N A42T D90C F134T",4
"lib1","SARS-CoV-2","TGCACTAAGCCGATTA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L P169L",2
"lib1","SARS-CoV-2","TGCACTAATAACCTCG",6,52.42,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F12V F44N N92S K128N C158M",5
"lib1","SARS-CoV-2","TGCACTACCCCCACCT",6,76.04,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Q79W F99I V115A N120I N151Q",5
"lib1","SARS-CoV-2","TGCACTACGTACTGTA",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39H N130V T140K N171S",4
"lib1","SARS-CoV-2","TGCACTACTTAAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59F I72*",2
"lib1","SARS-CoV-2","TGCACTAGCAATTAAT",1,12.14,10.78,0.01,0.1,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCACTAGTATAATGT",5,18.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V F70S Q84R D90T E141F",5
"lib1","SARS-CoV-2","TGCACTAGTGGTCGGT",1,40.28,8.84,-1.92,0.1,2.79,1.15,0.01,">1 nonsynonymous","G9V N120P",2
"lib1","SARS-CoV-2","TGCACTATAAATTCAG",1,5.59,10.91,0.15,0.19,2.9,1.03,0.02,"1 nonsynonymous","T3S",1
"lib1","SARS-CoV-2","TGCACTATTACATTTA",8,70.56,8.43,-2.33,0.2,1.86,1.13,0.01,">1 nonsynonymous","C6K Y35I N157H",3
"lib1","SARS-CoV-2","TGCACTCATATTTCTG",1,32.19,10.44,-0.32,0.06,2.93,1,0,">1 nonsynonymous","T3S D90R T140L E154A",4
"lib1","SARS-CoV-2","TGCACTCATCTACCAT",4,96.37,8.71,-2.05,0.05,2.79,1.07,0,">1 nonsynonymous","S41T A67F Y119R G174D",4
"lib1","SARS-CoV-2","TGCACTCATTTTCACT",1,21.88,9.98,-0.79,0.21,1.91,1.02,0.02,">1 nonsynonymous","N30G Y91Q",2
"lib1","SARS-CoV-2","TGCACTGATAAAGCAG",5,41.23,10.76,-0.01,0.09,2.93,1.03,0,">1 nonsynonymous","V173I H189Y",2
"lib1","SARS-CoV-2","TGCACTGTGTGTCTTA",8,44.94,8.79,-1.97,0.24,1.51,1.2,0.02,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","TGCACTTAGTTCTTCA",1,104.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I80R P177E",2
"lib1","SARS-CoV-2","TGCACTTCTTCGAACA",7,84.94,10.7,-0.07,0.05,2.93,1.03,0,"1 nonsynonymous","I80V",1
"lib1","SARS-CoV-2","TGCACTTTTTGAACGT",3,47.38,10.77,0.01,0.08,2.94,1.06,0,"1 nonsynonymous","N40R",1
"lib1","SARS-CoV-2","TGCAGAACCAGTTAAA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I A14L A89S I138G",4
"lib1","SARS-CoV-2","TGCAGAACCGCACGAC",5,58.27,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S45K I88R N120E F160N",4
"lib1","SARS-CoV-2","TGCAGAAGAAAATCAT",4,11.51,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D90P I142M",2
"lib1","SARS-CoV-2","TGCAGAAGAAGATGAA",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S I104S F126S",3
"lib1","SARS-CoV-2","TGCAGAAGTCAGATTG",3,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E C49I S69E D90N L183S",5
"lib1","SARS-CoV-2","TGCAGAATAGGTAGAT",2,67.24,9.46,-1.3,0.08,2.84,1.09,0,">1 nonsynonymous","N118E F156L",2
"lib1","SARS-CoV-2","TGCAGAATCCTGGGTA",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L N13S N171L",3
"lib1","SARS-CoV-2","TGCAGAATCTACTGAC",2,42.19,10.3,-0.47,0.06,2.83,1,0,"1 nonsynonymous","D34P",1
"lib1","SARS-CoV-2","TGCAGAATTAACTGGC",3,103.2,10.76,-0.01,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAGAATTAGCCAGA",6,49.9,9.72,-1.04,0.13,2.02,1.08,0,">1 nonsynonymous","G86N T201W",2
"lib1","SARS-CoV-2","TGCAGACAACAGCTAT",1,73.96,9.98,-0.78,0.13,2.31,1.07,0.01,">1 nonsynonymous","D90S R136L K199P",3
"lib1","SARS-CoV-2","TGCAGACCACTTAGAA",3,42.63,9.69,-1.07,0.13,2.03,1.1,0.01,">1 nonsynonymous","N1F D90L E186G",3
"lib1","SARS-CoV-2","TGCAGACCATATGAAG",1,7.81,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93T Q168L",2
"lib1","SARS-CoV-2","TGCAGACGTGCACTAC",2,12.79,8.67,-2.1,0.21,2.13,1.23,0.03,">1 nonsynonymous","G74L V173I",2
"lib1","SARS-CoV-2","TGCAGACTAACTGCTG",4,107.1,10.62,-0.15,0.02,2.88,1.07,0,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","TGCAGACTACAAATGG",1,40.68,10.61,-0.16,0.05,2.85,1.09,0,">1 nonsynonymous","K56F L60N",2
"lib1","SARS-CoV-2","TGCAGAGAGTTATAAG",1,33.34,10.04,-0.73,0.11,2.54,1.03,0,"1 nonsynonymous","C102L",1
"lib1","SARS-CoV-2","TGCAGAGCATTTACCC",9,1.6,NA,NA,NA,NA,NA,NA,"stop","V32A K132* E141F",3
"lib1","SARS-CoV-2","TGCAGATACGCCCAAG",8,77.2,6.57,-4.2,0.39,1.5,1.13,0.02,">1 nonsynonymous","D97N P161I",2
"lib1","SARS-CoV-2","TGCAGATACGTACCTT",4,58.39,10.75,-0.02,0.06,2.97,1.02,0,">1 nonsynonymous","G9N S129C",2
"lib1","SARS-CoV-2","TGCAGATGTGCGAATA",3,18.66,6.53,-4.23,0.2,2.75,1.08,0,">1 nonsynonymous","A14T K48Q I88Y F134L",4
"lib1","SARS-CoV-2","TGCAGATTTATACTGG",3,19.33,10.4,-0.37,0.18,2.41,1.06,0.01,">1 nonsynonymous","D97G L183M K198A",3
"lib1","SARS-CoV-2","TGCAGCAAAAGTATAG",4,126.45,7.68,-3.08,0.2,1.58,1.15,0.01,">1 nonsynonymous","G146S P161M G174A",3
"lib1","SARS-CoV-2","TGCAGCAAACACTTTG",4,104.79,10.7,-0.06,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAGCAGAATTCAAT",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P E76S I104S S164N",4
"lib1","SARS-CoV-2","TGCAGCCAAAGAAGGA",9,224.66,10.42,-0.34,0.03,2.88,1.03,0,">1 nonsynonymous","G9L S129K P149T",3
"lib1","SARS-CoV-2","TGCAGCCACGATTTTA",5,6.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L G101S N157T",3
"lib1","SARS-CoV-2","TGCAGCCCAAGTGGTA",2,47.09,6.65,-4.11,0.8,1.5,1.35,0.07,">1 nonsynonymous","Q144F G174W Y175N P197K",4
"lib1","SARS-CoV-2","TGCAGCCTGTATACAT",1,17.86,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S43I G83D E135P",3
"lib1","SARS-CoV-2","TGCAGCGTATACCCCG",8,67.32,10.76,-0.01,0.07,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAGCTATGTCGGTT",7,55.88,6.39,-4.38,0.43,1.5,1.2,0.01,">1 nonsynonymous","F44L K56I V65E D97N W106T",5
"lib1","SARS-CoV-2","TGCAGCTGGCCACCAC",2,44.29,10.67,-0.1,0.09,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCAGCTTAACCAGGT",2,18.79,9.42,-1.35,0.33,1.69,1.13,0.06,">1 nonsynonymous","K48W K132F P149R",3
"lib1","SARS-CoV-2","TGCAGCTTCGTCGATA",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G Y50A V65Y W106S N151S",5
"lib1","SARS-CoV-2","TGCAGGAACTTAACCA",6,44.74,9.98,-0.79,0.08,2.69,1.01,0,">1 nonsynonymous","K56M N92S N120D",3
"lib1","SARS-CoV-2","TGCAGGAAGATAGTGA",2,9.67,10.53,-0.23,0.12,2.83,1,0.01,"1 nonsynonymous","N13E",1
"lib1","SARS-CoV-2","TGCAGGACACATGAAG",5,73.98,10.28,-0.48,0.05,2.84,1.03,0,">1 nonsynonymous","D90L T100N",2
"lib1","SARS-CoV-2","TGCAGGACTGTGAAAG",9,152.54,9,-1.76,0.07,2.75,1.12,0,">1 nonsynonymous","I104T T170N",2
"lib1","SARS-CoV-2","TGCAGGAGGGACAAGC",4,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V G86R D97A",3
"lib1","SARS-CoV-2","TGCAGGAGTGTAAACA",7,47.65,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","N40V K56I V103H",3
"lib1","SARS-CoV-2","TGCAGGCCCCGGCTAG",2,52.8,10.64,-0.12,0.07,2.85,1,0,">1 nonsynonymous","L60W T100Y A190E",3
"lib1","SARS-CoV-2","TGCAGGCGGACGCTAA",3,12.3,10.14,-0.62,0.18,2.29,1.01,0.03,">1 nonsynonymous","D90V S129Y",2
"lib1","SARS-CoV-2","TGCAGGGCAACGTATT",6,25.63,7.97,-2.8,0.15,1.5,1.01,0.01,">1 nonsynonymous","S36P D90E I104N",3
"lib1","SARS-CoV-2","TGCAGGTAGAATCTCT",6,35.95,6.18,-4.58,0.46,1.67,1.21,0.01,">1 nonsynonymous","A42R K48N G86C I104L",4
"lib1","SARS-CoV-2","TGCAGGTTTGGCTGAT",2,22.51,10.05,-0.71,0.11,1.99,1.05,0,">1 nonsynonymous","D59G W106M G152K K198T",4
"lib1","SARS-CoV-2","TGCAGTAATTCGCAAG",4,136.46,9.4,-1.36,0.1,2.86,1.09,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TGCAGTAGAAAGCCGG",7,49.34,6.5,-4.27,0.5,1.5,1.15,0.02,">1 nonsynonymous","C6S R27W N64Y P82K L95D G101I",6
"lib1","SARS-CoV-2","TGCAGTAGAAGTTTTT",3,0.51,NA,NA,NA,NA,NA,NA,"stop","S41F Y50A D112* Y175*",4
"lib1","SARS-CoV-2","TGCAGTAGTTTTACTT",2,43.01,10.5,-0.26,0.08,2.83,1.07,0,">1 nonsynonymous","Y35F Y121I",2
"lib1","SARS-CoV-2","TGCAGTCAATTAATCT",2,37.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5E D68R G86V A190T",4
"lib1","SARS-CoV-2","TGCAGTCCCATTAGAG",16,89.44,6.24,-4.52,0.87,1.5,1.16,0.04,">1 nonsynonymous","E10S W23M A89T R124N A145V",5
"lib1","SARS-CoV-2","TGCAGTCTCGGTCTCT",3,75.79,9.96,-0.8,0.04,2.89,1.02,0,">1 nonsynonymous","C61S D97T F126V",3
"lib1","SARS-CoV-2","TGCAGTGACTACACAC",1,10.18,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9N F99L Y121D R136I",4
"lib1","SARS-CoV-2","TGCAGTTAATCACTAC",1,5.09,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","L60N G116Y V181N",3
"lib1","SARS-CoV-2","TGCAGTTACAAGGATC",2,10.78,6,-4.76,2,3,1.02,0,">1 nonsynonymous","Y119F D137M S164C",3
"lib1","SARS-CoV-2","TGCAGTTATGTACAGA",7,168.63,10.22,-0.54,0.05,2.92,1.02,0,">1 nonsynonymous","L125V S164M",2
"lib1","SARS-CoV-2","TGCATAAAAAAATGTC",1,6.69,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TGCATAAAATGTGTAC",5,56.94,10.81,0.05,0.07,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCATAAAATTCAATA",4,19.26,6.53,-4.24,0.38,1.5,1.1,0.02,">1 nonsynonymous","D59Y L60V T85C D97T W106Q Y178F",6
"lib1","SARS-CoV-2","TGCATAAAGTATAGGA",3,73.37,10.37,-0.4,0.05,2.92,1.02,0,">1 nonsynonymous","K26R A42Y A105T S184C",4
"lib1","SARS-CoV-2","TGCATAAATCCACCCA",15,183.23,10.77,0.01,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCATAAATCCTGGAG",2,54.96,9.33,-1.44,0.18,1.72,1.16,0.02,">1 nonsynonymous","Y35A Y93F",2
"lib1","SARS-CoV-2","TGCATAAATTCTTTTG",12,177.53,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","D112W",1
"lib1","SARS-CoV-2","TGCATAACACCGATAA",3,43.39,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55L Q144V G152N C158V G174P A190N",6
"lib1","SARS-CoV-2","TGCATAACTATCAACC",1,87.42,10.42,-0.34,0.03,2.91,1,0,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","TGCATAACTTGACTTT",3,51.46,8.18,-2.58,0.39,1.5,1.03,0.05,">1 nonsynonymous","L122C V173P Q176T",3
"lib1","SARS-CoV-2","TGCATAAGAGTACGGT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M A42L N107Y K114L Y159K K199S",6
"lib1","SARS-CoV-2","TGCATAAGATGATGAA",2,19.43,8.5,-2.27,0.12,2.15,1.13,0.01,">1 nonsynonymous","P7A Y119L K128L",3
"lib1","SARS-CoV-2","TGCATAAGCTACGACC",3,49.25,9.97,-0.8,0.14,2.15,1.06,0.01,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","TGCATAAGTTGTGCTA",1,23.41,11,0.24,0.14,2.93,1,0.01,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","TGCATAATATGTGTCC",2,6.98,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","A14L N58P G74L D97C V103R F156V",6
"lib1","SARS-CoV-2","TGCATAATGATCTGGG",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S A105L N118R",3
"lib1","SARS-CoV-2","TGCATAATTCAACTGC",1,18.46,10.41,-0.35,0.06,2.9,1.02,0,">1 nonsynonymous","N64L S139K",2
"lib1","SARS-CoV-2","TGCATACACATCCAAA",1,45.32,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","V103L S113P D137A N157S",4
"lib1","SARS-CoV-2","TGCATACGACCGGGCA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","D59P V77L F99* G155R T201W",5
"lib1","SARS-CoV-2","TGCATACGTAACTGAA",3,18.73,6,-4.76,2,1.5,1.06,0.03,">1 nonsynonymous","R25T K56Y K87R G155E V173T",5
"lib1","SARS-CoV-2","TGCATACTGCCTTATG",9,811.56,10.63,-0.14,0.02,2.91,1.02,0,">1 nonsynonymous","L95I T140L",2
"lib1","SARS-CoV-2","TGCATAGAACAAGCAA",4,0.58,NA,NA,NA,NA,NA,NA,"stop","L57S N64T N120Y G174*",4
"lib1","SARS-CoV-2","TGCATAGCACACCAAT",3,0.86,NA,NA,NA,NA,NA,NA,"stop","S36V I80T C150P L162* T201Q",5
"lib1","SARS-CoV-2","TGCATAGGCAAAACTA",4,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107G Y121V",2
"lib1","SARS-CoV-2","TGCATAGGTGGAACGT",2,46.29,9.81,-0.96,0.1,2.72,1.1,0,">1 nonsynonymous","F12I Q168T",2
"lib1","SARS-CoV-2","TGCATAGTTCAACATT",8,123.51,8.31,-2.45,0.09,2.49,1.12,0,">1 nonsynonymous","N1G F8Y Y175C",3
"lib1","SARS-CoV-2","TGCATATAAAACTGCG",4,0.08,NA,NA,NA,NA,NA,NA,"stop","S19* P197S",2
"lib1","SARS-CoV-2","TGCATATAGATACAAA",2,14.84,10.05,-0.71,0.14,2.59,1.06,0.01,"1 nonsynonymous","A18L",1
"lib1","SARS-CoV-2","TGCATATATTATTATG",1,10.48,6.1,-4.66,1.01,1.5,1.1,0.04,">1 nonsynonymous","P149T F156L Y175Q",3
"lib1","SARS-CoV-2","TGCATATTATTCACTG",14,140.13,6.23,-4.53,0.8,1.5,1.24,0.03,">1 nonsynonymous","N40P L60V A81M I104M F160G",5
"lib1","SARS-CoV-2","TGCATATTCAGAATTC",8,52.65,10.52,-0.25,0.07,2.86,1.01,0,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","TGCATATTCGCTATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","S45* L95R G155D Y175*",4
"lib1","SARS-CoV-2","TGCATCAACATCATCG",9,23.79,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","A33E V37F V65K Y123T N130F E141R",6
"lib1","SARS-CoV-2","TGCATCAAGACGGCTA",4,20.07,6.84,-3.92,0.54,1.73,1.14,0.04,">1 nonsynonymous","Y66T V103S Q163F V180G",4
"lib1","SARS-CoV-2","TGCATCACAATGAACA",1,23.07,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N40K K48I D59R D90N Y123G",5
"lib1","SARS-CoV-2","TGCATCACTCATCGAC",1,62.45,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S41R Y159S",2
"lib1","SARS-CoV-2","TGCATCAGAGTAGTAT",8,43.21,6,-4.76,1.42,1.5,1.13,0.01,">1 nonsynonymous","A89T D97N D112T",3
"lib1","SARS-CoV-2","TGCATCATGACCCACA",2,63.21,10.81,0.04,0.06,2.93,1.03,0,">1 nonsynonymous","S29C Y39E P197K",3
"lib1","SARS-CoV-2","TGCATCCATACGGCAT",4,49.22,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","K94Q F99S Y175D L183F",4
"lib1","SARS-CoV-2","TGCATCCCACGGCTTG",5,97.79,9.95,-0.81,0.12,2.19,1.05,0.01,"1 nonsynonymous","F17L",1
"lib1","SARS-CoV-2","TGCATCCCATAACCAT",1,19.74,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","F8R N92S N151K",3
"lib1","SARS-CoV-2","TGCATCCCATGACCCA",2,18.56,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","L38M G51D P82H I104F",4
"lib1","SARS-CoV-2","TGCATCCCATTATCCT",1,7.3,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3I N107D S139P G174D",4
"lib1","SARS-CoV-2","TGCATCCGAGAGTAAC",4,54.81,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S45L R73L G166V",3
"lib1","SARS-CoV-2","TGCATCCTAACACTTG",1,13.17,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P7S R25P S43L C61V K128P S139H",6
"lib1","SARS-CoV-2","TGCATCGAGCAAAAAA",9,122.68,8.29,-2.47,0.14,2.68,1.09,0.01,">1 nonsynonymous","F160Y Y175V",2
"lib1","SARS-CoV-2","TGCATCGCTCCAAACA",8,86.17,10.73,-0.03,0.07,2.91,1.04,0,">1 nonsynonymous","A42M K132V K199Y",3
"lib1","SARS-CoV-2","TGCATCTAAAGCCATA",3,42.57,10.01,-0.75,0.1,2.48,1,0,">1 nonsynonymous","V11Y P54S A190N",3
"lib1","SARS-CoV-2","TGCATCTAGTTGAGTG",1,31.55,10.67,-0.09,0.1,2.78,1.17,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCATCTATTTGACGC",2,39.45,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V77K N92Y L131T E154A",4
"lib1","SARS-CoV-2","TGCATCTCCTACTGGC",4,54.42,10.23,-0.54,0.06,2.66,1,0,"1 nonsynonymous","I28H",1
"lib1","SARS-CoV-2","TGCATCTGCGACTCAA",15,278.2,10.65,-0.12,0.03,2.91,1.05,0,">1 nonsynonymous","E10P T201H",2
"lib1","SARS-CoV-2","TGCATCTGGAAAATAA",4,28.18,6,-4.76,1.84,3,1.14,0,">1 nonsynonymous","S45V G51L D137I",3
"lib1","SARS-CoV-2","TGCATGAAAACCGCTG",2,49.34,8.2,-2.56,0.23,2.29,1.19,0.02,">1 nonsynonymous","N151L N157Y",2
"lib1","SARS-CoV-2","TGCATGAAAACGGTGT",2,42.98,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","N64L P96R G146I G166W T201R",5
"lib1","SARS-CoV-2","TGCATGAAAAGAACTA",5,2.91,NA,NA,NA,NA,NA,NA,"stop","K48* Q163K",2
"lib1","SARS-CoV-2","TGCATGATAAACTAAT",2,10.97,9.93,-0.84,0.16,2.67,1.01,0,">1 nonsynonymous","D97Y E141T F160L A192S",4
"lib1","SARS-CoV-2","TGCATGATATGATTTA",6,0.64,NA,NA,NA,NA,NA,NA,"stop","N24L Y123E K132* Q144T",4
"lib1","SARS-CoV-2","TGCATGATGATAAGGA",8,68.51,6.34,-4.42,0.49,1.5,1.14,0.02,">1 nonsynonymous","W23D V52I D98Y F160N G172L",5
"lib1","SARS-CoV-2","TGCATGATTAAAATTA",3,2.23,NA,NA,NA,NA,NA,NA,"stop","F70* R78M P96* P149S",4
"lib1","SARS-CoV-2","TGCATGCATAATTTTC",3,1.56,NA,NA,NA,NA,NA,NA,"stop","N13L S29* S41N",3
"lib1","SARS-CoV-2","TGCATGCCGTTCGACC",9,39.35,6.1,-4.67,1.09,1.5,1.25,0.03,">1 nonsynonymous","C61S G86Q V103Q S200T",4
"lib1","SARS-CoV-2","TGCATGCTAAGCACAT",3,27.4,9.77,-1,0.22,1.63,1.15,0.02,">1 nonsynonymous","N4T W106S L131M",3
"lib1","SARS-CoV-2","TGCATGGAAACAAAAA",16,234.01,10.23,-0.54,0.04,2.69,1.05,0,">1 nonsynonymous","L131C Y175W",2
"lib1","SARS-CoV-2","TGCATGGAAATACACT",7,91.18,6,-4.76,1.55,1.5,1.14,0,">1 nonsynonymous","K87E A105L G196E",3
"lib1","SARS-CoV-2","TGCATGGATAAAAACA",8,44.84,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","R16M S43L V103H G116A P169V",5
"lib1","SARS-CoV-2","TGCATGGTAACTAAAG",1,33.86,10.55,-0.21,0.04,2.83,1.13,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","TGCATGTATAGAACAA",1,54.86,9.87,-0.89,0.14,1.97,1.04,0.01,"1 nonsynonymous","F99V",1
"lib1","SARS-CoV-2","TGCATGTCACTACGGA",5,42.5,10.29,-0.47,0.08,2.88,1,0,">1 nonsynonymous","S41T K128D Q168N",3
"lib1","SARS-CoV-2","TGCATGTGACTTTGGG",4,41.83,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F8K C61S G86F Y91T",4
"lib1","SARS-CoV-2","TGCATGTGCAAAAGAA",11,169.14,10.78,0.01,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCATGTTCATACTCG",1,33.07,10.08,-0.69,0.06,2.9,1,0,">1 nonsynonymous","N109V V115Y F126V V173I",4
"lib1","SARS-CoV-2","TGCATTAAAGGTACTC",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E D90N",2
"lib1","SARS-CoV-2","TGCATTAAAGTGGGTC",2,21.49,10.63,-0.13,0.11,2.77,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCATTAACACAACTA",1,15.41,10.33,-0.43,0.04,2.93,1.07,0,"1 nonsynonymous","S113G",1
"lib1","SARS-CoV-2","TGCATTAACTCTGAAA",3,81.27,10.73,-0.03,0.05,2.95,1.01,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TGCATTAATCTATGCA",1,43.33,10.67,-0.1,0.05,2.93,1,0,"1 nonsynonymous","A145V",1
"lib1","SARS-CoV-2","TGCATTAATTATATAA",1,33.86,6.88,-3.88,0.22,1.5,1.13,0.01,">1 nonsynonymous","K56T S113W N120I",3
"lib1","SARS-CoV-2","TGCATTACAAAATCCA",10,42.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","P82Q D97C K128V E141R",4
"lib1","SARS-CoV-2","TGCATTACATAAGCCA",1,15.61,7.38,-3.38,0.17,1.65,1.11,0.01,">1 nonsynonymous","S113W S139A K199F",3
"lib1","SARS-CoV-2","TGCATTACCCACTGCG",2,38.34,10,-0.76,0.17,2.11,1.08,0.01,">1 nonsynonymous","E76K T201N",2
"lib1","SARS-CoV-2","TGCATTACGAATGAGG",4,26.67,6,-4.76,2,3,1.4,0.02,">1 nonsynonymous","A105E L125H",2
"lib1","SARS-CoV-2","TGCATTACGTATCTGA",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E154K S184P",2
"lib1","SARS-CoV-2","TGCATTACTTAATACA",4,20.03,8.34,-2.42,0.26,1.64,1.18,0.03,">1 nonsynonymous","S19F C61S E141D",3
"lib1","SARS-CoV-2","TGCATTACTTATATTC",14,249.05,10.75,-0.02,0.07,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCATTAGGAGATACG",2,5.23,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","C6R L38S C61S S113F S200F",5
"lib1","SARS-CoV-2","TGCATTAGTGTCTCAA",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R V103P Y119V",3
"lib1","SARS-CoV-2","TGCATTATAATACCAA",2,38.23,10.13,-0.63,0.05,2.78,1.05,0,">1 nonsynonymous","N1K Y165F",2
"lib1","SARS-CoV-2","TGCATTATGCGCAAAA",2,1.92,NA,NA,NA,NA,NA,NA,"stop","G86* R124N N130L",3
"lib1","SARS-CoV-2","TGCATTCAACATAGAT",2,10.53,10.33,-0.44,0.13,2.7,1.12,0.01,"1 nonsynonymous","E10C",1
"lib1","SARS-CoV-2","TGCATTCACCGAATTC",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L S36Q A105H F156L V173W",5
"lib1","SARS-CoV-2","TGCATTCCAAGGAACT",5,44.05,6.61,-4.16,0.39,1.59,1.22,0.01,">1 nonsynonymous","V32Q L60I P96L K198F",4
"lib1","SARS-CoV-2","TGCATTCCCACGCAAT",6,6.21,NA,NA,NA,NA,NA,NA,"stop","V37L N120V E141*",3
"lib1","SARS-CoV-2","TGCATTCTATCTTATA",1,20.2,9.18,-1.58,0.16,1.53,1.04,0.01,">1 nonsynonymous","G83K A105L L122Y",3
"lib1","SARS-CoV-2","TGCATTCTTACCATGA",2,8.02,8.66,-2.1,0.54,1.64,1.16,0.05,">1 nonsynonymous","S43R N58Y C102V P149K",4
"lib1","SARS-CoV-2","TGCATTCTTGAAGCAG",3,21.94,8.02,-2.75,0.42,1.5,1.06,0.05,">1 nonsynonymous","S45R F99M S129C",3
"lib1","SARS-CoV-2","TGCATTCTTTACAATT",3,115.86,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A14E R27I V32F I72V G101A Y119P G146V Y175V",8
"lib1","SARS-CoV-2","TGCATTGAAATCGAAA",8,1.37,NA,NA,NA,NA,NA,NA,"stop","P7* C61F",2
"lib1","SARS-CoV-2","TGCATTGAGAGACTAG",3,58.2,10.6,-0.16,0.05,2.95,1.02,0,"1 nonsynonymous","S19N",1
"lib1","SARS-CoV-2","TGCATTGATTAACAAC",1,23.32,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10S N40G K48F D59A G74R",5
"lib1","SARS-CoV-2","TGCATTGTTAAAATGT",3,20.46,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","N13K C31L F47S T63L A145Q S184C",6
"lib1","SARS-CoV-2","TGCATTTAAACTCTCC",1,22.52,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","G51V K128F Y143V G155E H189S",5
"lib1","SARS-CoV-2","TGCATTTAAAGAATAC",8,14.08,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15L G51W L95T S113R G166L",5
"lib1","SARS-CoV-2","TGCATTTAGAGAGGTA",3,1.41,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","TGCATTTCCACTATAG",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66P D98G",2
"lib1","SARS-CoV-2","TGCATTTGAAGTCAAC",8,135.37,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N4I A89D A105F",3
"lib1","SARS-CoV-2","TGCATTTGATGCAGTT",4,61.07,9.94,-0.82,0.12,2.33,1.07,0.01,">1 nonsynonymous","I2F N30E C61V S139M",4
"lib1","SARS-CoV-2","TGCATTTGGTTCATAA",3,40.99,9.82,-0.94,0.14,1.94,1.09,0.01,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","TGCCAAAAAAGGTTGC",5,0.15,NA,NA,NA,NA,NA,NA,"stop","F8* I28G K128F F167R",4
"lib1","SARS-CoV-2","TGCCAAACAACCCAAT",8,27.71,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","L60R F99H N120L S129G V182R",5
"lib1","SARS-CoV-2","TGCCAAACCTGCTCCT",4,60.96,10.79,0.02,0.07,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCAAACCTTGATAG",3,61.77,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P7Y W23A Y39F T46A P82E N120R I142T",7
"lib1","SARS-CoV-2","TGCCAAAGATAGCGGG",3,6.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N K87N Y123T G172L",4
"lib1","SARS-CoV-2","TGCCAAAGCTATTATA",1,26.32,10.51,-0.25,0.06,2.95,1.04,0,">1 nonsynonymous","L38M C61A",2
"lib1","SARS-CoV-2","TGCCAAAGTGTAAACG",1,2.12,NA,NA,NA,NA,NA,NA,"stop","Y21* N30F",2
"lib1","SARS-CoV-2","TGCCAAATCGTGCATT",1,7.54,6,-4.76,2,3,1.2,0.02,">1 nonsynonymous","T15N D112C S129L",3
"lib1","SARS-CoV-2","TGCCAAATTCAATGGA",16,265.37,10.74,-0.02,0.06,2.89,1.09,0,">1 nonsynonymous","G9E K56T",2
"lib1","SARS-CoV-2","TGCCAACTACTAAGAT",3,93.92,10.21,-0.55,0.05,2.87,1.01,0,">1 nonsynonymous","F47V N120S L122F",3
"lib1","SARS-CoV-2","TGCCAACTTACCTAAA",5,41.5,10.54,-0.23,0.06,2.9,1.05,0,">1 nonsynonymous","E10N T201L",2
"lib1","SARS-CoV-2","TGCCAAGAGGGTAACA",2,4.72,NA,NA,NA,NA,NA,NA,"stop","I2H A42V K56* N107S P133F F167Q",6
"lib1","SARS-CoV-2","TGCCAAGGAGCACTAA",2,93.22,10.3,-0.47,0.04,2.79,1.04,0,"1 nonsynonymous","V77T",1
"lib1","SARS-CoV-2","TGCCAAGTATTACTAG",2,11.48,9.04,-1.72,0.16,2.28,1.1,0.01,">1 nonsynonymous","S43K Y91A P169I",3
"lib1","SARS-CoV-2","TGCCAATAATAGGATC",2,23.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R27T C61I P82D",3
"lib1","SARS-CoV-2","TGCCAATAATATTTAA",15,155.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","D68K V173D",2
"lib1","SARS-CoV-2","TGCCAATAGCGAAGGT",5,118.22,6.03,-4.74,0.39,1.5,1.12,0,">1 nonsynonymous","G51P Y123C Y175V",3
"lib1","SARS-CoV-2","TGCCAATTATAATGCT",1,21.98,9.83,-0.93,0.1,1.71,1.12,0,"1 nonsynonymous","F185R",1
"lib1","SARS-CoV-2","TGCCACAAAGCTGAAG",2,17.82,10.9,0.13,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCACAACCAAAGCG",11,77.44,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5N A42G D68V A105C P177I",5
"lib1","SARS-CoV-2","TGCCACACAGACCTAA",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33G",1
"lib1","SARS-CoV-2","TGCCACATATAGAAGT",7,51.58,6.68,-4.09,0.45,1.5,1.11,0.03,">1 nonsynonymous","R16A G83L K94T",3
"lib1","SARS-CoV-2","TGCCACATCTGCTAAG",4,35.67,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K26R C61N D112S S129I N151K G166R",6
"lib1","SARS-CoV-2","TGCCACCATGGGAACC",6,46.24,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F47S I88W",2
"lib1","SARS-CoV-2","TGCCACCGGAGAATTA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","I2E A14Y V71* D137S L162*",5
"lib1","SARS-CoV-2","TGCCACCTAGCCAGAC",1,6.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40D R78Q V173N S184E",4
"lib1","SARS-CoV-2","TGCCACCTCGTCCGGA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","I2Q L122P P149*",3
"lib1","SARS-CoV-2","TGCCACCTGAATCAAT",1,24.71,9.74,-1.02,0.11,2.74,1.1,0.01,">1 nonsynonymous","A33V N118Q G155A",3
"lib1","SARS-CoV-2","TGCCACGGACCGGATC",6,44.59,8.1,-2.67,0.18,1.53,1.19,0.01,">1 nonsynonymous","T55S N107I H189Y",3
"lib1","SARS-CoV-2","TGCCACTACTACTTAA",1,9.3,10.32,-0.45,0.15,2.87,1.17,0.01,">1 nonsynonymous","T100F G166A",2
"lib1","SARS-CoV-2","TGCCACTTAGCCAAGG",3,68.22,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","L95N Y119Q",2
"lib1","SARS-CoV-2","TGCCAGAACAAAAATT",1,19.1,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","T55F A81V K94I Y119G K132E",5
"lib1","SARS-CoV-2","TGCCAGCAAATTTTAG",2,11.98,10.6,-0.16,0.13,2.92,1.05,0,"1 nonsynonymous","S41T",1
"lib1","SARS-CoV-2","TGCCAGCAATATGACA",7,165.46,8.6,-2.17,0.09,2.82,1.06,0,">1 nonsynonymous","K87V G146V",2
"lib1","SARS-CoV-2","TGCCAGCACATGGGCA",1,34.1,9.59,-1.18,0.27,1.5,1,0.03,">1 nonsynonymous","A89T L125I Y178R",3
"lib1","SARS-CoV-2","TGCCAGCGACGATACA",8,113.05,10.12,-0.64,0.06,2.05,1.02,0,">1 nonsynonymous","S19R S164H",2
"lib1","SARS-CoV-2","TGCCAGCTAAATTAAG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","G9F N40*",2
"lib1","SARS-CoV-2","TGCCAGCTTTACGGTT",9,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y S36D L131C",3
"lib1","SARS-CoV-2","TGCCAGGAAACCACTT",2,22.35,9.04,-1.72,0.3,1.76,1.05,0.06,">1 nonsynonymous","K48T Y91D",2
"lib1","SARS-CoV-2","TGCCAGGATAATTTTT",2,9.89,NA,NA,NA,NA,NA,NA,"stop","R136L Q144L Y178*",3
"lib1","SARS-CoV-2","TGCCAGTAGATCTGGG",4,66.75,10.74,-0.03,0.09,2.92,1.03,0,"1 nonsynonymous","Y66N",1
"lib1","SARS-CoV-2","TGCCAGTAGATTAGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14F I28D F44V N110* K128D S139E",6
"lib1","SARS-CoV-2","TGCCAGTCAACCGTAA",7,104.83,8.78,-1.98,0.18,1.96,1.14,0.01,">1 nonsynonymous","K56M F167L",2
"lib1","SARS-CoV-2","TGCCAGTCTGGCACCA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","I2P T63* G86I D112*",4
"lib1","SARS-CoV-2","TGCCAGTGACAAAACC",5,0.35,NA,NA,NA,NA,NA,NA,"stop","R16V C49F G83Y G117A G155T Q163* K199*",7
"lib1","SARS-CoV-2","TGCCAGTGGATTATAT",13,10.8,NA,NA,NA,NA,NA,NA,"stop","K56I G83* F99A N120P K128R",5
"lib1","SARS-CoV-2","TGCCATAAAAATACAA",3,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F V181P P197T",3
"lib1","SARS-CoV-2","TGCCATACTAGGCAAT",1,32.33,7.21,-3.55,0.38,1.5,1.14,0.04,"1 nonsynonymous","P82W",1
"lib1","SARS-CoV-2","TGCCATAGCATAAGTG",10,110.56,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","P82G F167K V173L G196V",4
"lib1","SARS-CoV-2","TGCCATAGGAGGAAAA",5,48.71,9.98,-0.79,0.1,2.52,1,0,">1 nonsynonymous","N4L S129L",2
"lib1","SARS-CoV-2","TGCCATAGGATTGAAG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","L38E E76D K94* V180W",4
"lib1","SARS-CoV-2","TGCCATAGTACCCCTA",8,38.61,7,-3.77,0.36,1.5,1.16,0.04,">1 nonsynonymous","P96F Y119R",2
"lib1","SARS-CoV-2","TGCCATATATCTCGGA",6,112.9,8.55,-2.21,0.06,2.32,1.07,0,">1 nonsynonymous","G9T Y119L K128C",3
"lib1","SARS-CoV-2","TGCCATCACAAGCAGT",5,35.87,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19F F44V I104N E141I",4
"lib1","SARS-CoV-2","TGCCATCACATGGTAA",1,40.86,10.76,-0.01,0.05,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCCATCAGAAGTTTT",5,49.16,10.12,-0.64,0.15,2.19,1,0.01,">1 nonsynonymous","N13Y I104Y",2
"lib1","SARS-CoV-2","TGCCATCTCACAAATT",1,55.19,8.48,-2.29,0.13,2.94,1,0.01,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","TGCCATGAAGAAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* Y21C C150R",3
"lib1","SARS-CoV-2","TGCCATGAGAGACAAA",3,36.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15W D59R D112T Y121K Q144K V153S S200N",7
"lib1","SARS-CoV-2","TGCCATTAACTGTCCC",5,36.54,9.17,-1.59,0.24,1.53,1.27,0.02,">1 nonsynonymous","C6T L57R",2
"lib1","SARS-CoV-2","TGCCATTACGAGACCC",2,363.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A14F V37C F44P N157T",4
"lib1","SARS-CoV-2","TGCCATTATAAATCTA",8,2.04,NA,NA,NA,NA,NA,NA,"stop","S19R P54K N120S Q168*",4
"lib1","SARS-CoV-2","TGCCATTTACCCACCT",6,110.9,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A18V D68G N109E T148I Y178N",5
"lib1","SARS-CoV-2","TGCCCAAAATTCCCAT",7,173.8,10.23,-0.53,0.03,2.94,1,0,">1 nonsynonymous","Y121Q G174S",2
"lib1","SARS-CoV-2","TGCCCAAACAAAATTC",2,15.9,10.37,-0.4,0.12,2.96,1,0.01,">1 nonsynonymous","V32F N120H Q144R",3
"lib1","SARS-CoV-2","TGCCCAACGCATAAAT",2,29.2,10.7,-0.07,0.13,2.61,1.12,0.01,"1 nonsynonymous","K26V",1
"lib1","SARS-CoV-2","TGCCCAAGTAACACAA",3,48.88,10.7,-0.07,0.08,2.82,1.09,0,">1 nonsynonymous","N4E T148G",2
"lib1","SARS-CoV-2","TGCCCACAACTAGTCA",3,26.87,9.03,-1.74,0.15,2.22,1.13,0.02,">1 nonsynonymous","A89P G155L",2
"lib1","SARS-CoV-2","TGCCCACAAGCAGCTG",3,5.97,6.19,-4.57,1.16,1.5,1.4,0.05,">1 nonsynonymous","N13I N40L V153H",3
"lib1","SARS-CoV-2","TGCCCACATAAAGAGA",1,23.48,9.75,-1.01,0.07,2.93,1,0,">1 nonsynonymous","S53W Q168M",2
"lib1","SARS-CoV-2","TGCCCACCTGGAGATT",1,18.38,8.98,-1.78,0.1,1.82,1.14,0.01,">1 nonsynonymous","V103M S139T",2
"lib1","SARS-CoV-2","TGCCCACGTAAAATAC",2,33.03,10.19,-0.58,0.07,2.75,1.02,0,"1 nonsynonymous","D34Y",1
"lib1","SARS-CoV-2","TGCCCACGTAAATATT",4,72.86,10.52,-0.25,0.1,2.93,1.05,0,"1 nonsynonymous","A42S",1
"lib1","SARS-CoV-2","TGCCCAGAAATTCGAG",1,14.13,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","L5G P82A K128Y E141V",4
"lib1","SARS-CoV-2","TGCCCAGACCCACCAC",9,89.34,9.78,-0.98,0.08,1.87,1.09,0,"1 nonsynonymous","C49Y",1
"lib1","SARS-CoV-2","TGCCCAGATTGACAAC",2,21.27,6.55,-4.21,0.37,1.5,1.12,0.01,">1 nonsynonymous","A89G N107T",2
"lib1","SARS-CoV-2","TGCCCAGTCGAGATGT",6,46.57,9.17,-1.6,0.07,2.82,1.1,0,"1 nonsynonymous","G166K",1
"lib1","SARS-CoV-2","TGCCCATAAATAATCT",3,15.85,10.08,-0.69,0.09,2.93,1,0.01,">1 nonsynonymous","K26S S36D K48I K56T K199I",5
"lib1","SARS-CoV-2","TGCCCATCGACACCAG",7,72.73,9.9,-0.87,0.05,2.79,1.02,0,"1 nonsynonymous","S19Q",1
"lib1","SARS-CoV-2","TGCCCATTCGAGAGAT",8,31.94,7.77,-3,0.47,1.5,1.09,0.08,">1 nonsynonymous","Y50P T100M G152I",3
"lib1","SARS-CoV-2","TGCCCATTCTCTAGAA",7,61.3,10.67,-0.1,0.05,2.96,1.01,0,">1 nonsynonymous","G9E S41F N120G L188P",4
"lib1","SARS-CoV-2","TGCCCATTTATCTTTA",8,100.65,9.5,-1.26,0.1,2.56,1.11,0,">1 nonsynonymous","N30F V52F G155L",3
"lib1","SARS-CoV-2","TGCCCCAAAGTCATAA",4,26.17,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F99Y D112T C158F",3
"lib1","SARS-CoV-2","TGCCCCAATCAAGTAT",4,48.24,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","R25G T100Q R136L",3
"lib1","SARS-CoV-2","TGCCCCAGAGGACTAC",1,66.27,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68M F99V V173T",3
"lib1","SARS-CoV-2","TGCCCCAGCAATTTAA",9,94.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9R P161Y",2
"lib1","SARS-CoV-2","TGCCCCAGTGCGAATT",8,91.17,8.27,-2.49,0.26,1.5,1.03,0.03,">1 nonsynonymous","R27K G83R D97E G117R F134L N171Q",6
"lib1","SARS-CoV-2","TGCCCCATCTGCCATC",3,10.53,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V32M Q84E V103Q N118T Q144P G166V",6
"lib1","SARS-CoV-2","TGCCCCCGCTGGAACT",9,102.64,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35E D68R V77R G86L",4
"lib1","SARS-CoV-2","TGCCCCGAAATAAAAT",5,155.98,10.61,-0.16,0.03,2.91,1.03,0,">1 nonsynonymous","D90R S184H",2
"lib1","SARS-CoV-2","TGCCCCGATTTGAATG",2,54.33,10.69,-0.07,0.05,2.92,1.07,0,">1 nonsynonymous","S45T G152S",2
"lib1","SARS-CoV-2","TGCCCCGTTAGCCCGA",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T G196T",2
"lib1","SARS-CoV-2","TGCCCCTAACTACAGG",6,22.1,6.72,-4.04,0.34,1.5,1.03,0.02,">1 nonsynonymous","S45I G101C R136C",3
"lib1","SARS-CoV-2","TGCCCCTTCAAAAATT",18,70.47,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","L5G V11F F62G Q84N V103H",5
"lib1","SARS-CoV-2","TGCCCGAATTCACGTC",8,5.74,NA,NA,NA,NA,NA,NA,"stop","W23* Y175* A190C",3
"lib1","SARS-CoV-2","TGCCCGACAAAAGAAA",5,69.88,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99K A145Y N151S Q176K",4
"lib1","SARS-CoV-2","TGCCCGATAGCCTTAA",4,54.71,10.78,0.02,0.08,2.95,1,0,">1 nonsynonymous","V52M L122R C195F K199Q",4
"lib1","SARS-CoV-2","TGCCCGCTTTGAAACC",1,10.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89R C102F W106R S113K S184V",5
"lib1","SARS-CoV-2","TGCCCGGAATTCAGTA",9,100.49,9.54,-1.22,0.13,1.71,1.13,0.01,">1 nonsynonymous","S69G N110L",2
"lib1","SARS-CoV-2","TGCCCGGTTTATATAT",2,2.23,NA,NA,NA,NA,NA,NA,"stop","K87M D90*",2
"lib1","SARS-CoV-2","TGCCCGTACTCGATAA",5,166.59,10.81,0.04,0.07,2.89,1.06,0,"1 nonsynonymous","V37G",1
"lib1","SARS-CoV-2","TGCCCGTTCCCTTACA",6,46.27,6,-4.76,2,3,1.21,0,">1 nonsynonymous","I2W G9H P54C Y91D G174E",5
"lib1","SARS-CoV-2","TGCCCTAACGTGAACT",1,17.46,6.97,-3.79,0.41,1.5,1.23,0.03,">1 nonsynonymous","F44H Y50M",2
"lib1","SARS-CoV-2","TGCCCTAGCATAATCT",1,28,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F8Q K94F S129V",3
"lib1","SARS-CoV-2","TGCCCTATGCTCTTAA",2,27.53,9.77,-1,0.09,2.27,1.1,0,">1 nonsynonymous","V103T G174A",2
"lib1","SARS-CoV-2","TGCCCTCCTTCTTCAA",5,53.7,10,-0.76,0.12,2.53,1.06,0.01,">1 nonsynonymous","C61A I72T",2
"lib1","SARS-CoV-2","TGCCCTCGGGTCATAA",1,8.18,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","T63C Y119T R127E Q168L G174T",5
"lib1","SARS-CoV-2","TGCCCTCTACGACCCT",3,28.07,8.71,-2.05,0.22,1.5,1.04,0.03,">1 nonsynonymous","E10K C61I A89G",3
"lib1","SARS-CoV-2","TGCCCTGGAATTGAGT",5,38.66,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6S L60T E135A P149T N157T F167T",6
"lib1","SARS-CoV-2","TGCCCTGTACGAAACT",5,60.98,10.15,-0.62,0.15,2.31,1.04,0.01,">1 nonsynonymous","K94S T140K",2
"lib1","SARS-CoV-2","TGCCCTTATTAACCAA",12,90.15,9.61,-1.15,0.15,1.8,1.1,0.01,">1 nonsynonymous","C49T T63P C102I",3
"lib1","SARS-CoV-2","TGCCGAAAATCCATTT",3,88.66,9.8,-0.97,0.11,1.82,1.1,0,"1 nonsynonymous","V173T",1
"lib1","SARS-CoV-2","TGCCGAACAAACTGAG",5,65.16,10.29,-0.47,0.1,2.47,1.02,0,"1 nonsynonymous","V52K",1
"lib1","SARS-CoV-2","TGCCGAACTGGATTTC",1,10.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61K Y119G Y165S",3
"lib1","SARS-CoV-2","TGCCGAAGAATTACAC",3,22.6,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","R16F A22P C49V R124P",4
"lib1","SARS-CoV-2","TGCCGAATCTAGATAC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","D59C L95* N107D L125A T148D",5
"lib1","SARS-CoV-2","TGCCGAATTTACTCCT",4,1.93,NA,NA,NA,NA,NA,NA,"stop","F44A F99V N107* K114M E135P P149M T201G",7
"lib1","SARS-CoV-2","TGCCGACCCTATTTAT",3,0.55,NA,NA,NA,NA,NA,NA,"stop","V37L F44V F62Y F70M Y119S F167*",6
"lib1","SARS-CoV-2","TGCCGACTTATGCGGA",4,23.97,9.73,-1.03,0.17,1.85,1.11,0.01,">1 nonsynonymous","T100A S139L",2
"lib1","SARS-CoV-2","TGCCGAGAATTCCTGC",1,36.71,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S36V N58C G101N F126W",4
"lib1","SARS-CoV-2","TGCCGAGAGCTTATTG",2,24.62,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","P96R Q144T G166R E186S",4
"lib1","SARS-CoV-2","TGCCGAGAGTACTAAT",2,8.5,NA,NA,NA,NA,NA,NA,"stop","K87E N110S Y175*",3
"lib1","SARS-CoV-2","TGCCGAGGGATGTTAG",3,29.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57F G86M W106E S113R V173S",5
"lib1","SARS-CoV-2","TGCCGATGAAAAACTA",1,14.2,10.59,-0.18,0.08,2.93,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCGCATAAAAAAAC",11,139.72,10.78,0.02,0.06,2.94,1.02,0,"1 nonsynonymous","K26T",1
"lib1","SARS-CoV-2","TGCCGCATGCATCTCC",2,56.59,10.69,-0.07,0.04,2.93,1.04,0,"1 nonsynonymous","R27W",1
"lib1","SARS-CoV-2","TGCCGCCACCACTCCT",18,267.04,10.74,-0.02,0.05,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCGCCATAACTCAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","K26L S41* V182A",3
"lib1","SARS-CoV-2","TGCCGCGAAGGACAAA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","Y121Q E141Y P169C T201*",4
"lib1","SARS-CoV-2","TGCCGCGCACAAATAA",1,5.17,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A18C D98Y S113E C158R",4
"lib1","SARS-CoV-2","TGCCGCGCATCGGTAG",3,72,10.48,-0.28,0.07,2.87,1.03,0,">1 nonsynonymous","D90R K114L",2
"lib1","SARS-CoV-2","TGCCGCGGAACTCCAG",13,97.26,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37F Y50V Y93N Y143Q",4
"lib1","SARS-CoV-2","TGCCGCTATTCTTTCT",2,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78K D112L",2
"lib1","SARS-CoV-2","TGCCGGATCAAGTCAG",1,28.08,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38K L183S",2
"lib1","SARS-CoV-2","TGCCGGATCCTTCGAT",3,31.75,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","I142W V182K",2
"lib1","SARS-CoV-2","TGCCGGGAACAATGCA",2,39.65,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A22N A42T G146C G172R",4
"lib1","SARS-CoV-2","TGCCGGTTAGAACATG",5,107.14,6.34,-4.42,0.42,1.5,1.14,0.01,">1 nonsynonymous","N24T V37S F44Y C158L",4
"lib1","SARS-CoV-2","TGCCGTACAAAAATGG",5,68.01,7.62,-3.15,0.29,1.51,1.21,0.03,">1 nonsynonymous","N64T D97H P133S P169K Y175N",5
"lib1","SARS-CoV-2","TGCCGTAGAAATCTTA",2,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M R78H V103H G152T T201P",5
"lib1","SARS-CoV-2","TGCCGTATAATTGGTT",4,1.16,NA,NA,NA,NA,NA,NA,"stop","L60P D68* R127* F156T",4
"lib1","SARS-CoV-2","TGCCGTTAAGGAAACC",10,152.81,9.82,-0.94,0.08,1.9,1.09,0,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TGCCGTTCAAAAGTTT",2,7.15,NA,NA,NA,NA,NA,NA,"stop","C6F A14C Y39* G86F",4
"lib1","SARS-CoV-2","TGCCGTTCATACAGAC",4,85.51,10.26,-0.5,0.04,2.85,1.04,0,">1 nonsynonymous","P7V K56H",2
"lib1","SARS-CoV-2","TGCCTAAACACATAGT",3,1.02,NA,NA,NA,NA,NA,NA,"stop","I2* D90I T140K T201M",4
"lib1","SARS-CoV-2","TGCCTAAACAGATATA",5,21.23,7.6,-3.17,0.37,1.5,1.02,0.05,">1 nonsynonymous","T3D W23I F160G V173C",4
"lib1","SARS-CoV-2","TGCCTAACAAAGGTTG",1,23.25,6.81,-3.95,0.24,1.5,1.1,0.01,">1 nonsynonymous","Y121T R136I",2
"lib1","SARS-CoV-2","TGCCTAACACAGCTCA",1,15.89,10.82,0.06,0.09,2.96,1.02,0,">1 nonsynonymous","C61N D98S",2
"lib1","SARS-CoV-2","TGCCTAACTTGTGAAG",5,88.94,9.87,-0.89,0.1,2.71,1.05,0,">1 nonsynonymous","S53H N107E S129N",3
"lib1","SARS-CoV-2","TGCCTAAGAGTTGGCA",1,10.28,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y50R L57W N130Y Y165L",4
"lib1","SARS-CoV-2","TGCCTAATCAACCTCC",2,49.78,10.54,-0.23,0.07,2.83,1.1,0,">1 nonsynonymous","N120R V173C",2
"lib1","SARS-CoV-2","TGCCTACAAGCAAAAC",7,178.01,9.27,-1.5,0.05,2.87,1.07,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TGCCTACAGATAATCC",5,175.14,10.75,-0.02,0.05,2.87,1.08,0,"1 nonsynonymous","T55D",1
"lib1","SARS-CoV-2","TGCCTACCGGTGTCTA",6,38.18,10.24,-0.52,0.07,2.8,1.03,0,">1 nonsynonymous","P7T E135A",2
"lib1","SARS-CoV-2","TGCCTACTAGGGCACA",3,19.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101M Y143V",2
"lib1","SARS-CoV-2","TGCCTACTTACCACAT",1,15.83,10.43,-0.33,0.07,2.86,1.08,0,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","TGCCTAGCACATCCTT",2,38.56,10.47,-0.3,0.08,2.92,1.04,0,">1 nonsynonymous","C61A T85S K128G P149N S164T",5
"lib1","SARS-CoV-2","TGCCTAGGAAAGTTAA",6,81.64,10.52,-0.25,0.06,2.89,1.07,0,">1 nonsynonymous","V173G K198D",2
"lib1","SARS-CoV-2","TGCCTAGTATTTAGGT",2,34.45,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R25V A81L D90N K132S N171G",5
"lib1","SARS-CoV-2","TGCCTATAGGCGAATA",2,16.53,9.92,-0.84,0.09,2.24,1,0.01,">1 nonsynonymous","F12W A22K",2
"lib1","SARS-CoV-2","TGCCTATGAACCTCTG",3,30.3,6,-4.76,1.78,1.5,1.18,0.02,">1 nonsynonymous","P96R G155F K198D",3
"lib1","SARS-CoV-2","TGCCTATGTACATATG",2,17.47,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N92L G117L T193N",3
"lib1","SARS-CoV-2","TGCCTATTCAGGTAAT",2,31.13,9.67,-1.09,0.09,2.13,1.05,0,">1 nonsynonymous","Y66V Q84W",2
"lib1","SARS-CoV-2","TGCCTCAAAGGGAGTA",3,19.55,10.16,-0.61,0.12,2.64,1.02,0,">1 nonsynonymous","S53I N64P F134S",3
"lib1","SARS-CoV-2","TGCCTCAATGGAATAA",2,23.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62T K94Y D98F",3
"lib1","SARS-CoV-2","TGCCTCACGTACCACA",2,0.88,NA,NA,NA,NA,NA,NA,"stop","A81* R136M H189R",3
"lib1","SARS-CoV-2","TGCCTCATACCCGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R T85M D98K N120W",4
"lib1","SARS-CoV-2","TGCCTCCCAGTATAGC",7,127.38,8.32,-2.45,0.16,1.56,1.2,0.01,">1 nonsynonymous","S139W G155H",2
"lib1","SARS-CoV-2","TGCCTCCTGAACCAAT",9,65.44,10.73,-0.04,0.06,2.92,1.04,0,">1 nonsynonymous","E141Q S200M",2
"lib1","SARS-CoV-2","TGCCTCGAGGCATTTA",1,20.99,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G9T V37M R73V I88Y V103C P149L",6
"lib1","SARS-CoV-2","TGCCTCGGCCCACAAC",4,8.23,6,-4.76,2,2.81,1.09,0,">1 nonsynonymous","R73P Y91V D97V G117R",4
"lib1","SARS-CoV-2","TGCCTCTACACTTGAA",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152T Y165S V181G",3
"lib1","SARS-CoV-2","TGCCTCTCACATTTTA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117P F156L E186Y",3
"lib1","SARS-CoV-2","TGCCTCTGGAATACCG",7,1.05,NA,NA,NA,NA,NA,NA,"stop","Y91L C158* N171W",3
"lib1","SARS-CoV-2","TGCCTCTTCCCGGAAT",1,5.69,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","F8K A89L S113Y K128A T170R",5
"lib1","SARS-CoV-2","TGCCTGAAAAACAAAT",4,3.56,NA,NA,NA,NA,NA,NA,"stop","Y39V G51* A105S R127I Q168R L188T",6
"lib1","SARS-CoV-2","TGCCTGAAAAATGAAT",3,69.92,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6V A14S R124S K199G",4
"lib1","SARS-CoV-2","TGCCTGAACTTATACC",6,55.11,6.22,-4.55,0.76,1.5,1.18,0.03,">1 nonsynonymous","T3W C150S",2
"lib1","SARS-CoV-2","TGCCTGACTATAGTCA",9,20.3,NA,NA,NA,NA,NA,NA,"stop","Y39* L122V",2
"lib1","SARS-CoV-2","TGCCTGAGAATTCACA",2,3.59,NA,NA,NA,NA,NA,NA,"stop","C61* N107V R127D L162Q",4
"lib1","SARS-CoV-2","TGCCTGATACAAGTAT",2,13.97,10.8,0.04,0.07,2.99,1,0,"1 nonsynonymous","D98R",1
"lib1","SARS-CoV-2","TGCCTGATATTACCCA",2,64.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49S G83V A89T Q163L",4
"lib1","SARS-CoV-2","TGCCTGATGCAAATGA",3,26.23,8.92,-1.85,0.13,3,1.09,0.01,">1 nonsynonymous","C61I Q168D",2
"lib1","SARS-CoV-2","TGCCTGTACCGCGGAG",2,43.88,10.78,0.02,0.03,2.94,1.02,0,"1 nonsynonymous","G9E",1
"lib1","SARS-CoV-2","TGCCTTAACTCGAGCC",6,773.73,10.71,-0.06,0.04,2.93,1.04,0,"1 nonsynonymous","L122W",1
"lib1","SARS-CoV-2","TGCCTTACCTCTCGTC",4,46.65,8.73,-2.04,0.17,1.5,1.19,0.01,">1 nonsynonymous","I88V L95T T201P",3
"lib1","SARS-CoV-2","TGCCTTAGCGAATATG",6,132.34,7.68,-3.09,0.17,1.51,1.14,0.01,">1 nonsynonymous","D98S I104V Y119L G155N",4
"lib1","SARS-CoV-2","TGCCTTATATCGGGAA",13,204.28,8.41,-2.35,0.15,1.55,1.13,0.01,"1 nonsynonymous","N92D",1
"lib1","SARS-CoV-2","TGCCTTATGAACCCAA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","I88M V103*",2
"lib1","SARS-CoV-2","TGCCTTCAAACACGAC",2,24.04,10.66,-0.1,0.1,2.96,1.03,0,">1 nonsynonymous","T55N T140L N171V",3
"lib1","SARS-CoV-2","TGCCTTCATCCCTAAA",3,87.67,8.73,-2.03,0.12,2.51,1.12,0.01,">1 nonsynonymous","R16I S139R P149S G166W",4
"lib1","SARS-CoV-2","TGCCTTCCGCAGATGC",1,34.4,10.83,0.06,0.1,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCTTGAATCCACAT",2,34.76,10.81,0.05,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCCTTGGAATTGAAG",6,51.03,9.96,-0.8,0.13,2.02,1.05,0.01,">1 nonsynonymous","S41L A67L F99L K199M",4
"lib1","SARS-CoV-2","TGCCTTGGAGAACATG",4,39.01,10.79,0.03,0.09,2.85,1.06,0,"1 nonsynonymous","L187Y",1
"lib1","SARS-CoV-2","TGCCTTTCCTCAGATA",1,11.87,9.34,-1.42,0.23,2.63,1.25,0.03,">1 nonsynonymous","D90G T100F N130V V173E",4
"lib1","SARS-CoV-2","TGCCTTTCTATTTAAT",4,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G Y35S G51F D59V L122Y",5
"lib1","SARS-CoV-2","TGCCTTTTGGATTATA",4,52.05,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I88F N118V S129N",3
"lib1","SARS-CoV-2","TGCGAAAAACAGAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I A14D T55W Y91F K114L",5
"lib1","SARS-CoV-2","TGCGAAAATGTGATGA",2,67.87,6.03,-4.74,0.86,1.5,1.13,0.02,">1 nonsynonymous","S113K G155F",2
"lib1","SARS-CoV-2","TGCGAAACATTAAACG",1,0.71,NA,NA,NA,NA,NA,NA,"stop","S41G F44Y D75A S113*",4
"lib1","SARS-CoV-2","TGCGAAACTAGTTTCA",19,200.35,10.6,-0.17,0.03,2.91,1.04,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","TGCGAAATAAATGATG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","I2* F44I I80E K132*",4
"lib1","SARS-CoV-2","TGCGAAATAGATCAAA",3,23.09,10.77,0,0.09,2.8,1.15,0,"1 nonsynonymous","K56D",1
"lib1","SARS-CoV-2","TGCGAAATCCAGCCTT",13,282.2,8.8,-1.97,0.12,2.51,1.1,0.01,">1 nonsynonymous","F44S N120T",2
"lib1","SARS-CoV-2","TGCGAAATCTACAGAA",3,0.71,NA,NA,NA,NA,NA,NA,"stop","F62N L95* Y178H",3
"lib1","SARS-CoV-2","TGCGAACAAATATTGA",4,6.06,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","G51L T100G W106Q K114R S129E",5
"lib1","SARS-CoV-2","TGCGAACTCATGCACT",2,31.59,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6E A105S P177G",3
"lib1","SARS-CoV-2","TGCGAACTTATAGACC",4,37.16,10.2,-0.56,0.12,2.49,1.01,0,">1 nonsynonymous","V37S P82V",2
"lib1","SARS-CoV-2","TGCGAAGAAAACAAAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","F12W L38* F44H G152M S164D",5
"lib1","SARS-CoV-2","TGCGAATAAAAATTCT",6,54.45,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D68E K87S N120L Y143A",4
"lib1","SARS-CoV-2","TGCGAATAAGAAAATC",3,11.51,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","T55V V103D S139Y",3
"lib1","SARS-CoV-2","TGCGAATAGCAAATCT",9,57.78,9.33,-1.44,0.21,1.67,1.16,0.02,">1 nonsynonymous","F62N D90N R136V",3
"lib1","SARS-CoV-2","TGCGAATTCGCCCTAA",5,92.55,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y119L E141Q P161W",3
"lib1","SARS-CoV-2","TGCGACAAAGAACATT",2,17.47,10.85,0.09,0.12,2.96,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGCGACAACTTACTAC",6,24.73,8.45,-2.31,0.19,1.76,1.17,0.01,">1 nonsynonymous","A89C N107E L187Q",3
"lib1","SARS-CoV-2","TGCGACACAGTTGAAA",3,9.32,7.15,-3.62,0.54,1.5,1.13,0.08,">1 nonsynonymous","Y50S V103L S129L I138H L188R",5
"lib1","SARS-CoV-2","TGCGACCATTGGAGTC",6,64.35,10.67,-0.1,0.06,2.88,1.04,0,">1 nonsynonymous","V65T L122T",2
"lib1","SARS-CoV-2","TGCGACCCATGTCATT",3,27.35,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G86N Y91A L95M D98V L111K L183R",6
"lib1","SARS-CoV-2","TGCGACCTAATAGCAT",3,6.89,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20T S53C C61R K114E",4
"lib1","SARS-CoV-2","TGCGACGAGCTAAACA",9,80.11,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S69L K87C Y121R P133A G174Q",5
"lib1","SARS-CoV-2","TGCGACGCAGCTACGA",13,5.16,NA,NA,NA,NA,NA,NA,"stop","S29* D59L",2
"lib1","SARS-CoV-2","TGCGACTATAAGATAG",6,3.7,NA,NA,NA,NA,NA,NA,"stop","I72* P177N",2
"lib1","SARS-CoV-2","TGCGACTGCTGCAACA",3,11.14,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","G86W V103Y",2
"lib1","SARS-CoV-2","TGCGAGAATAAAATTA",1,38.82,10.78,0.01,0.1,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGAGAGGATAAACC",4,59.51,7.69,-3.08,0.17,1.5,1.14,0.01,">1 nonsynonymous","N64E A105V N157A",3
"lib1","SARS-CoV-2","TGCGAGCCGATAGAGC",6,100.11,10.66,-0.1,0.04,2.92,1.02,0,">1 nonsynonymous","A42H K56R",2
"lib1","SARS-CoV-2","TGCGAGCTACCGCCCT",4,44.22,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C6Y K94A F99H I104S Y175T K199N",6
"lib1","SARS-CoV-2","TGCGAGGAAAATAGAA",6,11.54,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","T3A R16T C61Y F99N N107K C158Y",6
"lib1","SARS-CoV-2","TGCGAGGGGACTCCCA",2,13.92,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","S36K E76S G86N",3
"lib1","SARS-CoV-2","TGCGAGTCTCTAGCAG",4,47.29,6.31,-4.46,0.64,1.5,1.14,0.02,">1 nonsynonymous","S41W N107V G146I",3
"lib1","SARS-CoV-2","TGCGATAAAATGACCC",7,70.86,6.15,-4.62,0.99,1.5,1.22,0.03,">1 nonsynonymous","T3C Y91S P149V S184Q K198Q",5
"lib1","SARS-CoV-2","TGCGATAAACTGTCAC",2,18.24,8.15,-2.62,0.17,1.7,1.1,0.01,">1 nonsynonymous","T100D F126V P133A T148Y",4
"lib1","SARS-CoV-2","TGCGATAAAGTTGGGA",6,72.99,10.87,0.11,0.08,2.88,1.08,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","TGCGATAACTAAAATG",3,67.72,6.07,-4.69,0.93,1.5,1.13,0.02,">1 nonsynonymous","R73E R127F",2
"lib1","SARS-CoV-2","TGCGATAAGGTTATTT",1,38.02,10.46,-0.31,0.05,2.87,1.09,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","TGCGATACAAACGACG",2,51,10.71,-0.06,0.06,2.86,1.04,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TGCGATACTCTGATAT",6,80.19,10.7,-0.07,0.06,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGATAGATTTACAT",1,51.18,10.79,0.03,0.05,2.9,1.04,0,"1 nonsynonymous","S29F",1
"lib1","SARS-CoV-2","TGCGATAGCTTACCAT",2,68.99,10.61,-0.16,0.06,2.9,1.05,0,"1 nonsynonymous","K128C",1
"lib1","SARS-CoV-2","TGCGATAGGAAAGTAG",7,65.94,6,-4.76,1.56,1.5,1.11,0.02,">1 nonsynonymous","N118R P133E P161V Y175N",4
"lib1","SARS-CoV-2","TGCGATAGTATACAAT",7,57.29,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G101S Q144R",2
"lib1","SARS-CoV-2","TGCGATATATTCACAA",10,310.35,6.38,-4.38,0.34,1.5,1.17,0.01,">1 nonsynonymous","A42E G86L Y175F",3
"lib1","SARS-CoV-2","TGCGATATCAATTCAA",2,74.44,9.55,-1.22,0.11,2.52,1.13,0,">1 nonsynonymous","I2L D34E D59R K87W P197N",5
"lib1","SARS-CoV-2","TGCGATCTATCTTTTT",12,92.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","E10V V20E L57G G83L D98P I104E A145T N157S",8
"lib1","SARS-CoV-2","TGCGATGGATTTTGAT",1,15.39,10.77,0,0.05,2.87,1.09,0,">1 nonsynonymous","N110A T140R S200I",3
"lib1","SARS-CoV-2","TGCGATGTAGTCTGCA",3,76.85,10.22,-0.54,0.05,2.82,1,0,">1 nonsynonymous","A33L D90S V153W",3
"lib1","SARS-CoV-2","TGCGATTAGCTAGTAA",11,47.36,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y93T K114V Y119T P161M S200E",5
"lib1","SARS-CoV-2","TGCGATTATTCTCATG",5,71.85,10.66,-0.1,0.06,2.92,1.04,0,">1 nonsynonymous","L111I N120L",2
"lib1","SARS-CoV-2","TGCGATTGCATTCTTA",4,26.17,6.04,-4.73,0.61,3,1.15,0.01,">1 nonsynonymous","F99K F160C",2
"lib1","SARS-CoV-2","TGCGCAAAAGTATAGC",3,23.14,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","P96T C150F N157F",3
"lib1","SARS-CoV-2","TGCGCAACAATATACA",10,312.87,10.15,-0.61,0.05,2.75,1.05,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","TGCGCAACAGAATCCT",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99H K114I C150F L183A",4
"lib1","SARS-CoV-2","TGCGCAACCCCGTTAA",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W C49M F99H E141Q",4
"lib1","SARS-CoV-2","TGCGCAATAACAATTC",2,19.15,8.94,-1.82,0.17,2.78,1.22,0.01,">1 nonsynonymous","N118E G166Q",2
"lib1","SARS-CoV-2","TGCGCAATACAATTAG",2,13.28,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6R Y35F F44A V103L",4
"lib1","SARS-CoV-2","TGCGCACAGGAACAAT",8,165.37,10.6,-0.16,0.03,2.92,1.01,0,">1 nonsynonymous","S147N S184E",2
"lib1","SARS-CoV-2","TGCGCACATCTTTAAT",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I F99A W106M Q163W",4
"lib1","SARS-CoV-2","TGCGCACCAACGAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1A L60V W106R L131* I138R P149R",6
"lib1","SARS-CoV-2","TGCGCACCAATTATAC",1,11.68,10.26,-0.5,0.1,2.95,1.05,0,">1 nonsynonymous","S43Y T55M G155A T170S",4
"lib1","SARS-CoV-2","TGCGCACCCACTCGAA",6,17.51,10,-0.76,0.21,1.88,1.05,0.01,">1 nonsynonymous","S53R D59G S129L N171C",4
"lib1","SARS-CoV-2","TGCGCACGAATTTGCG",7,17.78,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N13S V37I N58T N107H L122M P133G Q144I",7
"lib1","SARS-CoV-2","TGCGCAGAATAATACA",6,101.04,10.64,-0.12,0.08,2.84,1,0,">1 nonsynonymous","S41R A192S",2
"lib1","SARS-CoV-2","TGCGCATAAAATTACC",4,0.06,NA,NA,NA,NA,NA,NA,"stop","G9M A14I R27W Y35S Y66F W106*",6
"lib1","SARS-CoV-2","TGCGCATATAATCGTA",8,74.74,6.02,-4.75,1.11,1.5,1.18,0.02,">1 nonsynonymous","G9T F99E",2
"lib1","SARS-CoV-2","TGCGCATATTTTAACT",2,15.05,10.28,-0.48,0.15,2.8,1.02,0.02,">1 nonsynonymous","V52L P161A",2
"lib1","SARS-CoV-2","TGCGCATCTTAGGGAT",8,31.92,6.03,-4.74,0.69,1.5,1.16,0.01,">1 nonsynonymous","F44L G152S S184P",3
"lib1","SARS-CoV-2","TGCGCATTACCCACCA",2,16.02,10.77,0.01,0.07,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGCCAAGGGCATGG",4,31.11,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59T N107F K114L",3
"lib1","SARS-CoV-2","TGCGCCTAATTGGCGA",1,21.5,8.1,-2.66,0.13,2.37,1.05,0.01,">1 nonsynonymous","N151L N157Y",2
"lib1","SARS-CoV-2","TGCGCCTCTGAACTCT",3,3.29,NA,NA,NA,NA,NA,NA,"stop","D90* N107G",2
"lib1","SARS-CoV-2","TGCGCCTTACTAAGAA",4,57.16,7.99,-2.78,0.29,1.5,1.04,0.02,">1 nonsynonymous","P82S D97Y T201L",3
"lib1","SARS-CoV-2","TGCGCGAAGTAATGAA",3,27.89,10.94,0.17,0.15,2.94,1.03,0.01,"1 nonsynonymous","Y123F",1
"lib1","SARS-CoV-2","TGCGCGAATTAGCTTG",4,64.83,10.77,0.01,0.06,2.93,1.04,0,"1 nonsynonymous","K114T",1
"lib1","SARS-CoV-2","TGCGCGAGAACAGTCA",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F S139R",2
"lib1","SARS-CoV-2","TGCGCGCAGCATATAG",2,1.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGCGCGCTGCAAGGGA",2,173.47,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2T G9D R73P V115N P177V",5
"lib1","SARS-CoV-2","TGCGCGGACGGATAAC",9,129.57,10.79,0.03,0.09,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGCTAACAGAATAC",1,17.2,6.04,-4.72,1.33,1.5,1.28,0.06,">1 nonsynonymous","R124S V173N",2
"lib1","SARS-CoV-2","TGCGCTAAGCGCACCT",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M C31V L60K K87L D98L",5
"lib1","SARS-CoV-2","TGCGCTACTATAACTC",6,75.68,10.23,-0.54,0.05,2.72,1.01,0,"1 nonsynonymous","A105V",1
"lib1","SARS-CoV-2","TGCGCTACTGCCTAAT",3,12.38,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","T15W N151T F167C",3
"lib1","SARS-CoV-2","TGCGCTACTTGTCGTT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","F8S F12* P54V",3
"lib1","SARS-CoV-2","TGCGCTAGATTGTTAT",7,41.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q D97Q S147V",3
"lib1","SARS-CoV-2","TGCGCTATGATTTAAT",1,30.55,9.04,-1.72,0.09,2.99,1.08,0,"1 nonsynonymous","G117R",1
"lib1","SARS-CoV-2","TGCGCTCCCAAAATAT",9,48.4,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V11C A105G F185Y",3
"lib1","SARS-CoV-2","TGCGCTGAAAAATAGG",2,10.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P7E N92F F156C",3
"lib1","SARS-CoV-2","TGCGCTGGCGCCCTGA",1,52.06,10.13,-0.63,0.08,2.3,1.05,0,">1 nonsynonymous","R16D N30T S53L P149Y",4
"lib1","SARS-CoV-2","TGCGGAAAGACTCCAA",1,11.64,7,-3.77,0.38,1.58,1.42,0.03,">1 nonsynonymous","A81V Y91S",2
"lib1","SARS-CoV-2","TGCGGAAATTGATAAA",2,102.01,8.4,-2.37,0.13,2.58,1.09,0.01,">1 nonsynonymous","R16S S113P L122S",3
"lib1","SARS-CoV-2","TGCGGAATACACAAAT",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8D S69P D98L E135S C150E",5
"lib1","SARS-CoV-2","TGCGGACCCCCGATAC",1,6.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40V L60R T85E I88P",4
"lib1","SARS-CoV-2","TGCGGACTACTGGCCA",1,15.03,10.82,0.05,0.08,2.91,1.04,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TGCGGACTCTTCTAAA",5,72.82,10.81,0.05,0.05,2.98,1,0,"1 nonsynonymous","N4R",1
"lib1","SARS-CoV-2","TGCGGAGACAATTATT",18,52.95,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","C6D F17L D34Y G51T L122W T140N G152C",7
"lib1","SARS-CoV-2","TGCGGAGCAATTAAAA",1,60.6,10.55,-0.22,0.07,2.84,1.1,0,"1 nonsynonymous","L60T",1
"lib1","SARS-CoV-2","TGCGGAGTTGTTAGAA",2,24.84,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11D V37H D68F N120I N157P",5
"lib1","SARS-CoV-2","TGCGGATCAACGACAA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","S41L V77C P96L W106A L122*",5
"lib1","SARS-CoV-2","TGCGGATTACAAAGAG",6,113.51,7.64,-3.13,0.18,1.6,1.11,0.01,">1 nonsynonymous","L5P Y119E G146V",3
"lib1","SARS-CoV-2","TGCGGCAAAATGAGAG",4,86.27,10.6,-0.16,0.06,2.88,1.08,0,">1 nonsynonymous","A42W Q163R",2
"lib1","SARS-CoV-2","TGCGGCAGAAACATGG",2,68.79,10.14,-0.63,0.1,2.54,1,0,">1 nonsynonymous","V52E K56N",2
"lib1","SARS-CoV-2","TGCGGCCGTAATACAG",5,21.37,10.66,-0.11,0.07,2.98,1,0,">1 nonsynonymous","R16S N40G T85N P149S",4
"lib1","SARS-CoV-2","TGCGGGAAATGCGATT",4,61.82,9.72,-1.04,0.06,2.04,1.03,0,">1 nonsynonymous","Y35I Y50Q I138T P149A",4
"lib1","SARS-CoV-2","TGCGGGACACTTTCCT",3,14.43,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","N24E G101D Y123T",3
"lib1","SARS-CoV-2","TGCGGGCACTTGGACT",1,1.99,NA,NA,NA,NA,NA,NA,"stop","I28* N110Y P149F",3
"lib1","SARS-CoV-2","TGCGGGCATACAAGGA",5,116.94,10.61,-0.15,0.05,2.91,1.03,0,"1 nonsynonymous","F47I",1
"lib1","SARS-CoV-2","TGCGGGCTTCTTTAAC",1,11.16,10.9,0.13,0.08,2.82,1.08,0,"1 nonsynonymous","T63K",1
"lib1","SARS-CoV-2","TGCGGGGACAGATGGA",6,173.97,10.81,0.05,0.06,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGGGGTCAAAATTA",2,109.28,10.57,-0.19,0.05,2.97,1.01,0,">1 nonsynonymous","F44L S129T",2
"lib1","SARS-CoV-2","TGCGGGTAAACAGTAC",2,36.07,8.11,-2.66,0.15,2.55,1.15,0.01,">1 nonsynonymous","N64S C158N Q168H P191F",4
"lib1","SARS-CoV-2","TGCGGGTATATAAAGC",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L F134P P149D",3
"lib1","SARS-CoV-2","TGCGGGTTTAAGCGAT",2,24.67,10.55,-0.21,0.07,2.84,1.08,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","TGCGGTAAAATACACG",1,5.05,6,-4.76,2,1.5,1.04,0.03,">1 nonsynonymous","V77R W106D S147L G174M",4
"lib1","SARS-CoV-2","TGCGGTAACATCAGTT",11,7.9,NA,NA,NA,NA,NA,NA,"stop","C6P E10* L60H T100I P161M",5
"lib1","SARS-CoV-2","TGCGGTAAGTATCGAG",1,11.62,6.06,-4.7,2,3,1.14,0,">1 nonsynonymous","A14N V103K T148P",3
"lib1","SARS-CoV-2","TGCGGTACAGACTTTG",1,35.16,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","A14V D112C T148K",3
"lib1","SARS-CoV-2","TGCGGTCCTATATCTA",2,52.75,6,-4.76,2,3,1.15,0,">1 nonsynonymous","Y39G Q84L R127D R136F",4
"lib1","SARS-CoV-2","TGCGGTGACTTCAGGA",5,35.59,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N40L V77K G172V",3
"lib1","SARS-CoV-2","TGCGGTGCGGACAACC",1,10.53,10.44,-0.33,0.14,2.77,1,0.01,">1 nonsynonymous","D90K S184L",2
"lib1","SARS-CoV-2","TGCGGTGGCAGTTGCA",1,34.11,7.86,-2.91,0.17,2.3,1.09,0.01,">1 nonsynonymous","Q84Y T100Y N157K",3
"lib1","SARS-CoV-2","TGCGGTGTGTCTTGTC",2,76.52,10.62,-0.14,0.06,2.89,1.04,0,">1 nonsynonymous","T15P F44W",2
"lib1","SARS-CoV-2","TGCGGTTATCAAGTGG",11,88.44,10.16,-0.6,0.09,2.65,1,0,">1 nonsynonymous","L60G Q84C N151Y",3
"lib1","SARS-CoV-2","TGCGGTTATCTCTACA",3,11.16,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","P7G N24T S29A F44I Y50I K87A Y121M",7
"lib1","SARS-CoV-2","TGCGGTTCTAGGTCTC",7,41.44,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6F T46L Y50C G74E S113W",5
"lib1","SARS-CoV-2","TGCGTAAACAGGAAAT",2,68.63,10.74,-0.03,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGTAAATAATCCTT",3,30.27,10.94,0.17,0.11,2.93,1.01,0.01,"1 nonsynonymous","Q168F",1
"lib1","SARS-CoV-2","TGCGTAAATCTTAGTA",3,43.43,10.76,-0.01,0.07,2.97,1.01,0,">1 nonsynonymous","I28L Y39V",2
"lib1","SARS-CoV-2","TGCGTAACTTACTGCA",2,37.88,7.99,-2.77,0.25,1.5,1.14,0.02,">1 nonsynonymous","T140A G146L",2
"lib1","SARS-CoV-2","TGCGTAAGAATAGATT",2,14.04,10.75,-0.02,0.05,2.97,1,0,"1 nonsynonymous","F62H",1
"lib1","SARS-CoV-2","TGCGTAAGCTAACCCC",1,13.42,6.65,-4.11,0.42,1.5,1.13,0.03,">1 nonsynonymous","F8L F99C I138L L162W",4
"lib1","SARS-CoV-2","TGCGTAAGCTGCGAGC",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L T15A D97I N120K",4
"lib1","SARS-CoV-2","TGCGTAATTAGCTAGA",6,205.97,10.21,-0.56,0.04,2.84,1.02,0,">1 nonsynonymous","R16N K87F E141W",3
"lib1","SARS-CoV-2","TGCGTACAAGGGTCCA",3,27.45,9.94,-0.82,0.14,2.16,1.07,0.01,">1 nonsynonymous","E10G L57V N64P",3
"lib1","SARS-CoV-2","TGCGTACACGTTGCAA",1,65.59,10.67,-0.09,0.08,2.88,1.09,0,"1 nonsynonymous","S164T",1
"lib1","SARS-CoV-2","TGCGTACACTCCGAGG",2,49.65,9.73,-1.04,0.14,2.38,1.06,0.01,">1 nonsynonymous","G86S L188N T201V",3
"lib1","SARS-CoV-2","TGCGTAGATCATCACA",5,53.72,9.5,-1.27,0.19,1.75,1.11,0.02,">1 nonsynonymous","F8H F62H S200W",3
"lib1","SARS-CoV-2","TGCGTATAAATTAACA",8,83.57,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","TGCGTATAAGTCATAG",6,157.51,10.82,0.06,0.06,2.92,1.04,0,">1 nonsynonymous","I2H F62Y",2
"lib1","SARS-CoV-2","TGCGTATACCCATATC",5,0.12,NA,NA,NA,NA,NA,NA,"stop","G51F K56S G86L Y143*",4
"lib1","SARS-CoV-2","TGCGTATGAAAAAAAT",1,126.73,9.82,-0.94,0.05,2.55,1.03,0,">1 nonsynonymous","K87R P96C N120E K198W",4
"lib1","SARS-CoV-2","TGCGTCACCACCTTAA",7,61.87,9.89,-0.87,0.1,2.01,1.09,0,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","TGCGTCAGCTACTTAT",3,98.97,9.89,-0.88,0.09,2.22,1.03,0,">1 nonsynonymous","C61L P96K",2
"lib1","SARS-CoV-2","TGCGTCCAATAAGTGC",5,74.74,10.62,-0.14,0.05,2.95,1.02,0,"1 nonsynonymous","N171Q",1
"lib1","SARS-CoV-2","TGCGTCCATGCCCACT",1,17.59,10.28,-0.49,0.17,2.86,1.11,0.01,">1 nonsynonymous","K87R L122N F134S",3
"lib1","SARS-CoV-2","TGCGTCTCGGCCCCCA",3,60.13,10.77,0.01,0.07,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCGTGACCATTATAA",3,13.88,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42H W106R L122K P177Y",4
"lib1","SARS-CoV-2","TGCGTGATCTCTGACT",4,106.27,9.98,-0.79,0.08,2.1,1.07,0,">1 nonsynonymous","N24D P54D L60M I104T G152D",5
"lib1","SARS-CoV-2","TGCGTGCCAATCGGCA",1,77.4,10.66,-0.1,0.04,2.97,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCGTGCCGCGAATAG",1,13.36,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C49T A81Y D90F W106A Q176V",5
"lib1","SARS-CoV-2","TGCGTGGCGAACACTA",5,38.84,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","Y21V I88N",2
"lib1","SARS-CoV-2","TGCGTGTGCATTCCAC",1,26.4,6.89,-3.87,0.52,1.5,1.18,0.04,">1 nonsynonymous","A18L A33R L60N K114V",4
"lib1","SARS-CoV-2","TGCGTGTTGGGGTAAA",1,37.91,8.08,-2.69,0.28,1.5,1.14,0.03,">1 nonsynonymous","N40E D137G",2
"lib1","SARS-CoV-2","TGCGTTAAAAAGAGAA",10,3.65,NA,NA,NA,NA,NA,NA,"stop","A81Y A105R F134G S200*",4
"lib1","SARS-CoV-2","TGCGTTAATCACCTAT",2,35.9,9.45,-1.32,0.08,1.95,1.1,0,">1 nonsynonymous","C6F A42T T46A I104W",4
"lib1","SARS-CoV-2","TGCGTTAGGTGGCCCA",5,0.31,NA,NA,NA,NA,NA,NA,"stop","V37K C49L D68* D90I S113P N120Q",6
"lib1","SARS-CoV-2","TGCGTTCATAACCGCA",9,180.5,10.73,-0.04,0.06,2.91,1.03,0,"1 nonsynonymous","N171Q",1
"lib1","SARS-CoV-2","TGCGTTCCTGAGAACG",11,121.02,10.25,-0.52,0.05,2.83,1.02,0,"1 nonsynonymous","R127S",1
"lib1","SARS-CoV-2","TGCGTTCGTAAATCAA",3,27.27,10.63,-0.14,0.06,2.91,1.04,0,"1 nonsynonymous","T140P",1
"lib1","SARS-CoV-2","TGCGTTCTAACCCGAA",7,26.55,10.64,-0.12,0.04,2.87,1.05,0,">1 nonsynonymous","A42I T201C",2
"lib1","SARS-CoV-2","TGCGTTTTGAGAGTAA",4,11.94,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P82C L95Q",2
"lib1","SARS-CoV-2","TGCGTTTTTAATAGAC",1,28.44,10.32,-0.44,0.06,2.87,1.08,0,">1 nonsynonymous","T3R A18D",2
"lib1","SARS-CoV-2","TGCTAAAAAAAGTAAA",3,105.52,10.77,0.01,0.06,2.92,1.04,0,"1 nonsynonymous","S139T",1
"lib1","SARS-CoV-2","TGCTAAAAAACGTCAT",1,6.78,6,-4.76,2,1.5,1.28,0.08,">1 nonsynonymous","I2D D68Q S139R",3
"lib1","SARS-CoV-2","TGCTAAAAATAGACAG",1,0.26,NA,NA,NA,NA,NA,NA,"stop","N120M Y175*",2
"lib1","SARS-CoV-2","TGCTAAAAGTGAGTTA",3,50.44,6,-4.76,1.95,1.5,1.2,0.01,">1 nonsynonymous","K56L R127C F160T",3
"lib1","SARS-CoV-2","TGCTAAACAATAAAAT",1,14.81,6.92,-3.85,0.9,1.5,1.18,0.02,">1 nonsynonymous","F12S T46S P54L C61F",4
"lib1","SARS-CoV-2","TGCTAAACATAGAACT",2,42.12,10.23,-0.54,0.1,2.7,1,0,">1 nonsynonymous","A18W S43P T100Y",3
"lib1","SARS-CoV-2","TGCTAAACCTTAATAT",2,29.69,10.67,-0.09,0.11,2.86,1.13,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCTAAACGATAGCTT",3,5.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3Q S41G Y50S",3
"lib1","SARS-CoV-2","TGCTAAAGAATCTACT",2,13.48,9.35,-1.41,0.19,2.45,1.02,0.03,">1 nonsynonymous","F44H G146R",2
"lib1","SARS-CoV-2","TGCTAAAGAGATATGT",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N T170Q",2
"lib1","SARS-CoV-2","TGCTAAAGAGGGTATT",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100W K114W N120S K132Q F167T",5
"lib1","SARS-CoV-2","TGCTAAAGCTAAATTG",3,17.47,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","G9Y F44R D90R K114Y V181S",5
"lib1","SARS-CoV-2","TGCTAAAGTTCTAAGG",6,3.04,NA,NA,NA,NA,NA,NA,"stop","D90W N107A L122*",3
"lib1","SARS-CoV-2","TGCTAAATAAATCTTG",6,24.56,6.32,-4.45,0.92,1.5,1.08,0.05,">1 nonsynonymous","A14Y L38I L131S",3
"lib1","SARS-CoV-2","TGCTAAATACGCGAAT",6,61.76,9.44,-1.32,0.17,1.65,1.11,0.01,">1 nonsynonymous","I2F C49A L122T T201P",4
"lib1","SARS-CoV-2","TGCTAAATAGGATACT",3,96.24,8.94,-1.82,0.05,2.85,1.09,0,">1 nonsynonymous","G116H G166L",2
"lib1","SARS-CoV-2","TGCTAAATATTACCCC",11,308.96,9.62,-1.14,0.04,2.83,1.06,0,">1 nonsynonymous","S139C F156T",2
"lib1","SARS-CoV-2","TGCTAAATCTGGCGGA",3,20.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L5K P54N V103K E141I",4
"lib1","SARS-CoV-2","TGCTAAATGTATGCAA",4,159.78,10.12,-0.65,0.06,2.74,1,0,"1 nonsynonymous","G83I",1
"lib1","SARS-CoV-2","TGCTAAATTGTGCCTT",1,1.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","TGCTAAATTTAACGAA",3,60.71,6,-4.76,1.97,1.5,1.2,0.01,">1 nonsynonymous","E10R A67C D112V",3
"lib1","SARS-CoV-2","TGCTAAATTTCGCTGT",3,14.15,6,-4.76,2,3,1.07,0,">1 nonsynonymous","F12Q C61T T100G N107M K114N V115P R127L G146L G174K",9
"lib1","SARS-CoV-2","TGCTAACCACTAACCC",4,70.97,10.85,0.09,0.09,2.93,1,0,"1 nonsynonymous","K48T",1
"lib1","SARS-CoV-2","TGCTAACCTATAGCGC",3,187.19,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C49V D68V G116R E141G Y178E",5
"lib1","SARS-CoV-2","TGCTAACGCAGCAGAT",1,74.2,10.68,-0.09,0.04,2.96,1,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","TGCTAAGAGAGTGCAA",3,32.89,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","I72L N107L P133S",3
"lib1","SARS-CoV-2","TGCTAAGAGGTGCCGT",3,32.34,10.83,0.07,0.09,2.93,1,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","TGCTAAGCCTAATCAG",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I T63Y D98N S139Y A145S",5
"lib1","SARS-CoV-2","TGCTAAGCCTCTTGAG",3,50.81,10.62,-0.14,0.06,2.91,1.05,0,"1 nonsynonymous","C61I",1
"lib1","SARS-CoV-2","TGCTAAGGATGGGAGA",6,69.2,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","N13K S113R N118T L122G P197R",5
"lib1","SARS-CoV-2","TGCTAAGGTGGTTGGG",5,17.39,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","D97C P133I T148A Q168L",4
"lib1","SARS-CoV-2","TGCTAAGTGCCTAAAA",1,81.35,10.76,0,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTAAGTGGTGCGAA",5,45.78,10.49,-0.27,0.07,2.93,1.01,0,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","TGCTAAGTTCAAATGC",2,15.26,10.31,-0.46,0.11,2.67,1.14,0,"1 nonsynonymous","E186L",1
"lib1","SARS-CoV-2","TGCTAATAAGGCTACG",15,178.9,6.02,-4.75,1.32,1.5,1.31,0.03,">1 nonsynonymous","F44K A89Q D97T",3
"lib1","SARS-CoV-2","TGCTAATAATTGACCA",8,9.44,NA,NA,NA,NA,NA,NA,"stop","Y39* P177N",2
"lib1","SARS-CoV-2","TGCTAATCCCCCGAAT",5,113.43,10.1,-0.66,0.04,2.91,1.04,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","TGCTAATGGCACAGAA",8,163,10.7,-0.06,0.03,2.92,1.04,0,">1 nonsynonymous","R16N Y39A F62L",3
"lib1","SARS-CoV-2","TGCTAATTATGTTCCT",4,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118A R127L F167N",3
"lib1","SARS-CoV-2","TGCTAATTGTTTGCTA",3,34.48,8.81,-1.95,0.24,1.5,1.03,0.03,"1 nonsynonymous","K94I",1
"lib1","SARS-CoV-2","TGCTACAAACAAACAT",2,146.62,10.22,-0.54,0.05,2.78,1,0,">1 nonsynonymous","L57F G146A",2
"lib1","SARS-CoV-2","TGCTACAACCCAAATC",1,17.07,10.73,-0.04,0.09,2.76,1.16,0,">1 nonsynonymous","L60H F160S",2
"lib1","SARS-CoV-2","TGCTACAAGGCCCAAA",2,19.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26R I104E",2
"lib1","SARS-CoV-2","TGCTACAATGACTACT",7,59.77,6,-4.76,1.95,1.5,1.12,0.02,">1 nonsynonymous","P96L G152P Y159F",3
"lib1","SARS-CoV-2","TGCTACAATGACTCTT",2,2.43,NA,NA,NA,NA,NA,NA,"stop","D59Q K87* N107I Q176P",4
"lib1","SARS-CoV-2","TGCTACCATACCTACG",4,65.27,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35M Y93S",2
"lib1","SARS-CoV-2","TGCTACCGCAAAACCA",1,37.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F70S Y121A S129G Q176P",4
"lib1","SARS-CoV-2","TGCTACGAATAACGGT",6,128.9,10.16,-0.6,0.05,2.75,1.04,0,"1 nonsynonymous","G83I",1
"lib1","SARS-CoV-2","TGCTACTAAATAGTAA",7,157.29,10.73,-0.03,0.05,2.9,1.07,0,"1 nonsynonymous","S43L",1
"lib1","SARS-CoV-2","TGCTACTAGAAACGAA",1,49.62,10.76,-0.01,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTACTCTGGTATCT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S D34M S41E D90T Y165A",5
"lib1","SARS-CoV-2","TGCTACTTCATCCACA",4,12.44,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P82D T100N Y119P T201V",4
"lib1","SARS-CoV-2","TGCTAGAAACGTACTA",13,2.56,NA,NA,NA,NA,NA,NA,"stop","F12V S36M D98* W106L K128L",5
"lib1","SARS-CoV-2","TGCTAGAGGGACACAT",8,115.76,10.83,0.07,0.05,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCTAGATTAACGATG",4,54.15,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9T K56C E76T K132V",4
"lib1","SARS-CoV-2","TGCTAGCTGAAGGCCT",2,38.72,10.59,-0.18,0.07,2.91,1,0,">1 nonsynonymous","L5N A105T T201G",3
"lib1","SARS-CoV-2","TGCTAGGAAACTATTG",3,1.79,NA,NA,NA,NA,NA,NA,"stop","K56Y Q176*",2
"lib1","SARS-CoV-2","TGCTAGGATGACAATT",7,101.39,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39E F44R N120T N151C C158D",5
"lib1","SARS-CoV-2","TGCTAGTAATTGAGAG",3,8.13,6,-4.76,2,3,1.08,0,">1 nonsynonymous","G9S C49I F99R T170A C195R",5
"lib1","SARS-CoV-2","TGCTAGTCCTGCATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N L122M D137G G174E",4
"lib1","SARS-CoV-2","TGCTATACAGAATATC",11,1.25,NA,NA,NA,NA,NA,NA,"stop","G51* Y93A Y119H",3
"lib1","SARS-CoV-2","TGCTATACTTTCCTTA",4,26.89,10.07,-0.69,0.1,2.5,1.03,0.01,">1 nonsynonymous","P54T R136T",2
"lib1","SARS-CoV-2","TGCTATAGCCGAAACC",3,45.69,10.46,-0.31,0.04,2.95,1,0,"1 nonsynonymous","G146H",1
"lib1","SARS-CoV-2","TGCTATCAAATGGGAC",1,8.07,7.13,-3.64,0.28,2.12,1.19,0.02,">1 nonsynonymous","N64V Y93P N171A T201Y",4
"lib1","SARS-CoV-2","TGCTATCACAATGACG",2,17.79,10.91,0.14,0.07,2.91,1.03,0,"1 nonsynonymous","V37N",1
"lib1","SARS-CoV-2","TGCTATCCAATCTCAC",3,38.12,6.32,-4.44,0.6,1.5,1.15,0.02,">1 nonsynonymous","N13P T55Q Y119S",3
"lib1","SARS-CoV-2","TGCTATCCATTGTACA",2,66.11,10.63,-0.13,0.06,2.89,1.05,0,"1 nonsynonymous","K48I",1
"lib1","SARS-CoV-2","TGCTATCCTAAAAGAA",1,5.02,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","Y66F A105V P133D H189G C195T",5
"lib1","SARS-CoV-2","TGCTATCTATTACCCA",18,183.99,9.89,-0.87,0.08,2.15,1.05,0,"1 nonsynonymous","D137S",1
"lib1","SARS-CoV-2","TGCTATCTGCGATTTA",1,20.88,9.85,-0.91,0.21,1.85,1.11,0.01,"1 nonsynonymous","C49L",1
"lib1","SARS-CoV-2","TGCTATGAATCTACAC",3,0,NA,NA,NA,NA,NA,NA,"stop","V37* P161A",2
"lib1","SARS-CoV-2","TGCTATGGTCCTGAGC",3,52.45,9.59,-1.18,0.13,1.83,1.14,0.01,">1 nonsynonymous","T15A F62I D90F K132N",4
"lib1","SARS-CoV-2","TGCTATGTACGATCCG",4,113.42,10.83,0.07,0.05,2.9,1.06,0,"1 nonsynonymous","K128E",1
"lib1","SARS-CoV-2","TGCTATGTATAACACC",2,9.31,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V52A L60D F134A C158G T201M",5
"lib1","SARS-CoV-2","TGCTATTAGTTTGTAA",7,32.1,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","W23G L57R Y93E",3
"lib1","SARS-CoV-2","TGCTATTATTAACCCA",1,32.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M K94M R124P",3
"lib1","SARS-CoV-2","TGCTATTCAATTGAAA",5,138.26,8.41,-2.35,0.1,2.43,1.06,0,">1 nonsynonymous","G146M F160C",2
"lib1","SARS-CoV-2","TGCTATTTGAAGGCGA",3,123.59,10.73,-0.04,0.07,2.94,1.04,0,">1 nonsynonymous","I72V T148L K198L",3
"lib1","SARS-CoV-2","TGCTCAAAATAGCCCT",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V D98F N120F",3
"lib1","SARS-CoV-2","TGCTCAAACCACCTTT",8,90.03,10.74,-0.03,0.07,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTCAAATATTTTCT",2,47.33,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","T3F F167P",2
"lib1","SARS-CoV-2","TGCTCAAATTTGGTAT",8,46.57,9.46,-1.3,0.12,1.94,1.15,0.01,">1 nonsynonymous","V37T D90I G116H",3
"lib1","SARS-CoV-2","TGCTCAACCCATAGCA",1,17.4,8.68,-2.08,0.16,2.42,1.05,0.01,">1 nonsynonymous","P7Y A67Y L125S T140S",4
"lib1","SARS-CoV-2","TGCTCAACTAGTACAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","K94T Y123* E135R G155H N171T A190F",6
"lib1","SARS-CoV-2","TGCTCACACACCATGA",3,31.3,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","C49N V173S",2
"lib1","SARS-CoV-2","TGCTCACACCTGTAAA",1,27.62,8.02,-2.74,0.22,1.97,1.12,0.02,">1 nonsynonymous","G74F F156E",2
"lib1","SARS-CoV-2","TGCTCACAGTGATTTA",1,46.63,8.07,-2.69,0.13,2.46,1.11,0.01,">1 nonsynonymous","F44L K56N Y159Q K199V",4
"lib1","SARS-CoV-2","TGCTCACCAACAGAAC",1,39.17,NA,NA,NA,NA,NA,NA,"stop","D75* D90C S184K T201F",4
"lib1","SARS-CoV-2","TGCTCACCCGAATAAG",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82H D97H L125M",3
"lib1","SARS-CoV-2","TGCTCACTGCGGCTTG",5,80.46,10.74,-0.03,0.07,2.79,1.05,0,">1 nonsynonymous","Y35F S45T",2
"lib1","SARS-CoV-2","TGCTCAGAGAAAGCTG",1,9.95,10.56,-0.2,0.09,3,1,0,">1 nonsynonymous","V32T K48C T148S",3
"lib1","SARS-CoV-2","TGCTCAGATACCATAG",1,40.58,9.95,-0.82,0.15,2.34,1.04,0.01,">1 nonsynonymous","T3I A81V",2
"lib1","SARS-CoV-2","TGCTCAGCAGTTATCG",1,23.95,6.25,-4.51,0.26,2.03,1.09,0,">1 nonsynonymous","G9R G174I S184P",3
"lib1","SARS-CoV-2","TGCTCAGTTAATAAGA",4,63.83,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","F44V S69L G83V V180M",4
"lib1","SARS-CoV-2","TGCTCATAACCTCAAA",6,78.51,7.92,-2.84,0.25,1.65,1.15,0.02,">1 nonsynonymous","T63R C158A",2
"lib1","SARS-CoV-2","TGCTCATACAACCTCG",4,44.84,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","I88M D98T V115L R127Q G152A",5
"lib1","SARS-CoV-2","TGCTCATATATACTAA",1,30.43,9.81,-0.95,0.04,2.95,1.02,0,">1 nonsynonymous","V37M F44N P149N",3
"lib1","SARS-CoV-2","TGCTCATGACGTAAAG",3,87.03,10.24,-0.53,0.05,2.94,1.02,0,"1 nonsynonymous","G155D",1
"lib1","SARS-CoV-2","TGCTCATGCAGATCTT",1,6.31,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","L57I P82I L95D P96T C102T",5
"lib1","SARS-CoV-2","TGCTCCAAGGAATCAC",6,96.34,6.74,-4.02,0.3,1.5,1.15,0.02,">1 nonsynonymous","T63R K87D I104L Y119Q I142F K199T",6
"lib1","SARS-CoV-2","TGCTCCAAGTCATGAA",4,164.43,10.71,-0.05,0.04,2.96,1.01,0,"1 nonsynonymous","F62L",1
"lib1","SARS-CoV-2","TGCTCCACGCCCTTGA",3,33.86,9.49,-1.27,0.18,1.6,1.16,0.02,">1 nonsynonymous","W23T T201S",2
"lib1","SARS-CoV-2","TGCTCCACGGAGCATG",2,40.89,8.74,-2.02,0.25,1.5,1.2,0.02,">1 nonsynonymous","L5I V37C D59L N120T S129F",5
"lib1","SARS-CoV-2","TGCTCCAGCAAATAAC",2,9.56,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","C49I D98T N120P C158L Y165W",5
"lib1","SARS-CoV-2","TGCTCCATTACCCATT",7,49.36,8.28,-2.48,0.25,1.5,1.06,0.02,">1 nonsynonymous","C31Y W106C",2
"lib1","SARS-CoV-2","TGCTCCCAAATACCAG",1,23.98,10.66,-0.1,0.05,2.98,1,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","TGCTCCCACAAACTAT",2,20.2,10.78,0.01,0.1,2.8,1.14,0,"synonymous","",0
"lib1","SARS-CoV-2","TGCTCCCCCCTCTAAC",7,202.68,10.57,-0.2,0.03,2.93,1.01,0,"1 nonsynonymous","Y123A",1
"lib1","SARS-CoV-2","TGCTCCCCCTGCCCAC",3,18.3,10.68,-0.09,0.12,2.87,1.08,0,"1 nonsynonymous","A42P",1
"lib1","SARS-CoV-2","TGCTCCCGATTCTACA",2,47.62,9.29,-1.47,0.11,2,1.12,0.01,">1 nonsynonymous","V11A K87M P133A",3
"lib1","SARS-CoV-2","TGCTCCCTCACGCACC",4,8.7,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I80K N171F",2
"lib1","SARS-CoV-2","TGCTCCGAAGGCGACT",5,47.74,9.25,-1.51,0.1,2.84,1.15,0,">1 nonsynonymous","T100N T170N",2
"lib1","SARS-CoV-2","TGCTCCGATAGTACCC",2,15.86,8.21,-2.55,0.28,1.94,1.17,0.04,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","TGCTCCGCATATACCA",9,104.47,9.56,-1.21,0.06,2.76,1.1,0,">1 nonsynonymous","S45Y L125V",2
"lib1","SARS-CoV-2","TGCTCCGGGGCTAAGC",7,50.3,6.35,-4.42,0.34,1.5,1.16,0.01,">1 nonsynonymous","A81R G86Y E154N",3
"lib1","SARS-CoV-2","TGCTCCTAAAATATCG",4,98.47,10.83,0.07,0.08,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTCCTAACAAATTT",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77Q Y178H A190N",3
"lib1","SARS-CoV-2","TGCTCCTAGCGCGAAC",5,40.82,10.78,0.01,0.06,2.96,1.01,0,"1 nonsynonymous","S29K",1
"lib1","SARS-CoV-2","TGCTCGAATACGTCCA",3,41.62,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G9P N24P G172D",3
"lib1","SARS-CoV-2","TGCTCGAGAAACCACG",1,41.79,7.26,-3.51,0.22,1.9,1.17,0.01,">1 nonsynonymous","C61T L125D F156S",3
"lib1","SARS-CoV-2","TGCTCGAGCTTTTAAC",2,14.1,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13Y F17T A42F T46A Y50W P169S",6
"lib1","SARS-CoV-2","TGCTCGATACGCAAAC",7,118.08,9.27,-1.5,0.09,2.58,1.11,0,">1 nonsynonymous","I2S I28L S41V D98Y I142L T170S",6
"lib1","SARS-CoV-2","TGCTCGATATCCCCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84T V103L T148R",3
"lib1","SARS-CoV-2","TGCTCGTTGCAACGAC",3,21.38,7.49,-3.28,0.16,1.85,1.02,0.01,">1 nonsynonymous","A81Y T170C",2
"lib1","SARS-CoV-2","TGCTCTAACATACCCA",5,41.44,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D90L N118Q K132I F156I P169A",5
"lib1","SARS-CoV-2","TGCTCTAACCATAACC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M G51T G116L E141M",4
"lib1","SARS-CoV-2","TGCTCTAGGATAAACT",2,10.42,10.65,-0.11,0.08,2.86,1.14,0,">1 nonsynonymous","P54V D90L",2
"lib1","SARS-CoV-2","TGCTCTATCTAGTTAA",3,55.32,10.72,-0.04,0.1,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTCTATGCCAGGAA",5,44.29,6,-4.76,2,3,1.18,0,">1 nonsynonymous","E10S K48N F160M F167E",4
"lib1","SARS-CoV-2","TGCTCTCCAAATTGCT",3,95.13,10.74,-0.02,0.06,2.9,1.07,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","TGCTCTGACGAACAAG",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V S36V T55G A105R G116R Y159A F167L Y175A",8
"lib1","SARS-CoV-2","TGCTCTGACGTACTCA",2,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y159I",1
"lib1","SARS-CoV-2","TGCTCTGTGATACAGT",2,28.44,10.72,-0.04,0.06,3,1.02,0,">1 nonsynonymous","C61Q T148L",2
"lib1","SARS-CoV-2","TGCTCTTTACACTAAC",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S A42L Y50L L125T",4
"lib1","SARS-CoV-2","TGCTGAAAGTTTTGAA",3,6.31,9.6,-1.16,0.13,3,1.03,0,">1 nonsynonymous","I104S G146C G172Y",3
"lib1","SARS-CoV-2","TGCTGAACCGTTCTAG",3,0.65,NA,NA,NA,NA,NA,NA,"stop","A33D P82* G86I V103N T170K",5
"lib1","SARS-CoV-2","TGCTGAAGTATACGAG",3,45.74,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","E10V G86V F156S T201A",4
"lib1","SARS-CoV-2","TGCTGACCAACTCAAT",15,151.16,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R124Y T140Y",2
"lib1","SARS-CoV-2","TGCTGACTAGTACAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S G116I V153I",3
"lib1","SARS-CoV-2","TGCTGAGAAATAATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19R V77E F160P P197*",4
"lib1","SARS-CoV-2","TGCTGAGCATATACCA",4,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M D97F K114L E141L",4
"lib1","SARS-CoV-2","TGCTGAGCATTTGTTT",6,94.33,10.02,-0.74,0.05,2.44,1.02,0,"1 nonsynonymous","I80M",1
"lib1","SARS-CoV-2","TGCTGAGCTCCGTAAT",1,24.65,10.86,0.09,0.13,2.87,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGCTGAGGACACGCTT",1,1.19,NA,NA,NA,NA,NA,NA,"stop","P7L V37R S129I N171* L188S",5
"lib1","SARS-CoV-2","TGCTGAGTTCGAAAAT",7,195.54,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A105V P177L",2
"lib1","SARS-CoV-2","TGCTGATATGAATTGG",3,20.46,6,-4.76,2,1.5,1.28,0.08,">1 nonsynonymous","N64S V103N F156S Q163L",4
"lib1","SARS-CoV-2","TGCTGATCGCCCGGTT",4,10.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","L5W Y35M D90L V103S S113L G152D G166Y",7
"lib1","SARS-CoV-2","TGCTGCAAATCCCTGG",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L D68M D97W K128L",4
"lib1","SARS-CoV-2","TGCTGCAACTCCGGTA",3,32.18,7.21,-3.56,0.28,1.5,1.11,0.02,">1 nonsynonymous","W23E S129R",2
"lib1","SARS-CoV-2","TGCTGCAATAACACAA",3,15.77,7.58,-3.18,0.41,1.5,1.02,0.08,">1 nonsynonymous","C49K N107M",2
"lib1","SARS-CoV-2","TGCTGCACCCACCATC",2,28,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y39S V103K",2
"lib1","SARS-CoV-2","TGCTGCCAATCACACG",3,37.31,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V52D V103L S129G",3
"lib1","SARS-CoV-2","TGCTGCCCACACATAT",6,15.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60K I104R Y178H",3
"lib1","SARS-CoV-2","TGCTGCGCGTGTCTCT",2,43.12,10.65,-0.11,0.15,2.87,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGCTGCGCTTACTCTA",1,69.05,8.64,-2.13,0.14,2.46,1.09,0.01,">1 nonsynonymous","G9R V32K F44Q N171L T201N",5
"lib1","SARS-CoV-2","TGCTGCTCCATCCTGC",8,6.07,NA,NA,NA,NA,NA,NA,"stop","G74* D98G",2
"lib1","SARS-CoV-2","TGCTGGAGAGGCGATT",3,81.84,10.36,-0.4,0.1,2.69,1.14,0,">1 nonsynonymous","V173Y S184C",2
"lib1","SARS-CoV-2","TGCTGGAGATTGACCA",5,110.18,10.65,-0.12,0.05,2.87,1.09,0,">1 nonsynonymous","T148F K198V",2
"lib1","SARS-CoV-2","TGCTGGCGAAACTTCG",5,25.09,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A67P N151K",2
"lib1","SARS-CoV-2","TGCTGGCGCACAATCA",1,11.4,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A22D G86S R127F",3
"lib1","SARS-CoV-2","TGCTGGCGTCAAATTA",4,138.11,10.79,0.02,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTGGTCTAATCAAG",3,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84F Y91F F99D T201S",4
"lib1","SARS-CoV-2","TGCTGTAAGGGGCTAG",9,123.3,9.63,-1.14,0.09,1.8,1.11,0,">1 nonsynonymous","E10P S43A Q84H D98A V153M",5
"lib1","SARS-CoV-2","TGCTGTAATAAACAAA",5,109.78,9.89,-0.87,0.08,2.79,1.04,0,">1 nonsynonymous","K132F T170K",2
"lib1","SARS-CoV-2","TGCTGTACAAAGTGGA",6,0.81,NA,NA,NA,NA,NA,NA,"stop","P54L D75V R124H P161Y Y175* V181Q",6
"lib1","SARS-CoV-2","TGCTGTACGGTCTATA",4,70.92,9.04,-1.72,0.08,2.32,1.1,0,">1 nonsynonymous","A67F K128F F156L",3
"lib1","SARS-CoV-2","TGCTGTATGATTTCGA",1,39.31,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","S113L G152I N171K",3
"lib1","SARS-CoV-2","TGCTGTCAACATGAAA",8,51.26,6.04,-4.73,0.77,1.5,1.16,0.01,">1 nonsynonymous","K26M D34H G86L",3
"lib1","SARS-CoV-2","TGCTGTCAAGACATTT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I A145L",2
"lib1","SARS-CoV-2","TGCTGTCTAAATGGCG",7,87.16,6.3,-4.46,0.49,1.5,1.2,0.01,">1 nonsynonymous","N30H N92V",2
"lib1","SARS-CoV-2","TGCTGTCTACTACAAA",4,20.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F62I K94P",2
"lib1","SARS-CoV-2","TGCTGTGAGAATATAC",1,45.18,9.96,-0.81,0.09,2.02,1.03,0,">1 nonsynonymous","K56A D97E W106I",3
"lib1","SARS-CoV-2","TGCTGTGCTATAGATT",3,54.33,10.35,-0.42,0.05,2.84,1.06,0,"1 nonsynonymous","F44S",1
"lib1","SARS-CoV-2","TGCTGTGTATAGTCGT",6,26.72,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","N13Y K94T R136M G146S T201A",5
"lib1","SARS-CoV-2","TGCTGTTACATAGTAA",2,13.95,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","K87S L95R Y123H",3
"lib1","SARS-CoV-2","TGCTTAAAAACTTCTA",1,62.89,9.6,-1.16,0.09,1.96,1.06,0,">1 nonsynonymous","G86D T201E",2
"lib1","SARS-CoV-2","TGCTTAAAACGTCCCT",2,63.92,6,-4.76,1.11,1.5,1.14,0.01,">1 nonsynonymous","T3D P177L",2
"lib1","SARS-CoV-2","TGCTTAAACAAGCAAA",1,13.99,10.64,-0.12,0.1,2.92,1.07,0.01,"1 nonsynonymous","N1K",1
"lib1","SARS-CoV-2","TGCTTAAAGAAACGAC",2,41.69,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","A67H G116S",2
"lib1","SARS-CoV-2","TGCTTAAATACTAAGT",1,1.23,NA,NA,NA,NA,NA,NA,"stop","S19R N64* T170*",3
"lib1","SARS-CoV-2","TGCTTAAATCAAGTAA",4,16.73,8.82,-1.94,0.16,1.99,1.1,0.01,">1 nonsynonymous","A89G N151L",2
"lib1","SARS-CoV-2","TGCTTAACAGAAGAAT",2,58.3,10.86,0.1,0.06,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTTAACCATGGCAC",8,151.84,10.66,-0.11,0.06,2.89,1.07,0,">1 nonsynonymous","T55F P191S",2
"lib1","SARS-CoV-2","TGCTTAACTCCTAAAT",1,12.59,6,-4.76,1.15,1.5,1.08,0.01,">1 nonsynonymous","N4L G9W A42S G51Y E76A",5
"lib1","SARS-CoV-2","TGCTTAACTTAAGAAC",3,42.8,9.59,-1.17,0.29,1.5,1.22,0.03,">1 nonsynonymous","A33W P96L S184L",3
"lib1","SARS-CoV-2","TGCTTAAGAGAACCCT",2,5.77,NA,NA,NA,NA,NA,NA,"stop","A33N T63* Q176F",3
"lib1","SARS-CoV-2","TGCTTAATAACGACGT",3,70.9,9.93,-0.83,0.1,2.24,1.03,0,"1 nonsynonymous","S19R",1
"lib1","SARS-CoV-2","TGCTTACAAACTTCAC",5,328.93,10.57,-0.19,0.03,2.92,1.01,0,"1 nonsynonymous","A81E",1
"lib1","SARS-CoV-2","TGCTTACAGTATCGGT",1,40.99,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L60N G86V L122F C150Q",4
"lib1","SARS-CoV-2","TGCTTACATCCAAACA",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150K Q176R",2
"lib1","SARS-CoV-2","TGCTTACCCCGACCAC",2,53.4,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G86P D112V N151S Y165S Q176A",5
"lib1","SARS-CoV-2","TGCTTACCCGTAGATA",1,8.22,7.38,-3.39,0.39,1.5,1.06,0.07,">1 nonsynonymous","Y39H K87S Y91L D98K F160L",5
"lib1","SARS-CoV-2","TGCTTACTCCAGAATC",11,168.98,10.75,-0.02,0.05,2.91,1.06,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","TGCTTAGAACAGGCTA",3,77.9,10.77,0,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTTAGATATGTACG",1,76.75,9.79,-0.97,0.05,2.65,1.04,0,">1 nonsynonymous","Q84Y N130V Q144A E154V",4
"lib1","SARS-CoV-2","TGCTTAGATCGAGACG",2,11.46,10.17,-0.59,0.11,2.43,1.1,0,">1 nonsynonymous","E141K Y178L",2
"lib1","SARS-CoV-2","TGCTTAGGACCGATTA",1,37.68,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","K26G I88R N120L I142A V173S K198D",6
"lib1","SARS-CoV-2","TGCTTAGGAGAGGCAA",2,57,7.2,-3.57,0.27,1.5,1.19,0.01,">1 nonsynonymous","T63A C158S H189Y",3
"lib1","SARS-CoV-2","TGCTTAGGTGACGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* L60Q N130F",3
"lib1","SARS-CoV-2","TGCTTATATCTGTGCA",1,9.55,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E10K K48F I80E Q84R D90S G152S",6
"lib1","SARS-CoV-2","TGCTTATCAAACAGAT",11,68.45,6.51,-4.25,0.53,1.5,1.26,0.03,">1 nonsynonymous","A89E S200Y",2
"lib1","SARS-CoV-2","TGCTTATCGACCCACT",5,18.28,6.78,-3.98,0.57,1.5,1.27,0.05,">1 nonsynonymous","L5T Y35L C49S I88S Y93L S113Q F185Q",7
"lib1","SARS-CoV-2","TGCTTATTATACGGTC",5,99.57,7.62,-3.15,0.26,1.5,1.16,0.02,">1 nonsynonymous","E10L S113V T170N",3
"lib1","SARS-CoV-2","TGCTTATTGATGAAAT",3,22.2,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","S41A V65Q T85N G146L",4
"lib1","SARS-CoV-2","TGCTTCAAGAACGAAC",7,126.99,8.74,-2.02,0.16,1.55,1.16,0.01,">1 nonsynonymous","D90R Y123M Q163P",3
"lib1","SARS-CoV-2","TGCTTCATGCTCACTA",3,90.87,10.15,-0.62,0.05,2.61,1.02,0,">1 nonsynonymous","E10D D34F K56D",3
"lib1","SARS-CoV-2","TGCTTCCAATTCGGCA",2,35.8,9.99,-0.77,0.12,1.92,1.1,0,">1 nonsynonymous","A14T F185G",2
"lib1","SARS-CoV-2","TGCTTCCAGAAATCTA",2,36.94,10.56,-0.2,0.07,2.95,1,0,">1 nonsynonymous","T85M I138C",2
"lib1","SARS-CoV-2","TGCTTCCTAGAGGCGC",1,28.99,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K48R F70T F167A",3
"lib1","SARS-CoV-2","TGCTTCCTCCGAACGT",10,29.88,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","T46P R73T N107R",3
"lib1","SARS-CoV-2","TGCTTCGAAACAAAAA",1,27.63,8.8,-1.97,0.13,1.85,1.1,0.01,">1 nonsynonymous","D97Y Y121K G155A",3
"lib1","SARS-CoV-2","TGCTTCGACACGTAAC",2,31.29,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W23M G51C V77S F99S V182L",5
"lib1","SARS-CoV-2","TGCTTCGATCTGATTG",2,134.61,10.74,-0.02,0.06,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTTCTGCCTACCAC",6,38.98,8.14,-2.63,0.45,1.5,1,0.07,">1 nonsynonymous","A33R D68A D97T A105I Y119T P133T Q144L",7
"lib1","SARS-CoV-2","TGCTTCTGCTAGAACT",5,4.2,NA,NA,NA,NA,NA,NA,"stop","T3K G152*",2
"lib1","SARS-CoV-2","TGCTTCTTGTGCGTGA",1,9.39,6.24,-4.52,0.92,1.5,1.35,0.05,">1 nonsynonymous","N64M G86L",2
"lib1","SARS-CoV-2","TGCTTCTTTTCATTCT",11,110.26,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44P Y93M N151I",3
"lib1","SARS-CoV-2","TGCTTGATTGATCCTA",3,26.17,8.74,-2.02,0.12,2.51,1.16,0.01,">1 nonsynonymous","G9K V37Q T85P T170K",4
"lib1","SARS-CoV-2","TGCTTGCATGGATCGT",6,87.27,10.66,-0.11,0.09,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGCTTGCGAGCTTATC",3,27.86,6.82,-3.94,0.48,1.5,1.2,0.04,">1 nonsynonymous","F62V R124A",2
"lib1","SARS-CoV-2","TGCTTGCTCTGACTGC",3,89.36,10.19,-0.58,0.07,2.75,1,0,"1 nonsynonymous","N24F",1
"lib1","SARS-CoV-2","TGCTTGTTTGTAATAC",3,27.11,10.11,-0.65,0.17,2.63,1,0.02,">1 nonsynonymous","N30Q V103I",2
"lib1","SARS-CoV-2","TGCTTTAAACGATTGA",2,8.33,10.18,-0.59,0.26,2.29,1,0.02,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","TGCTTTAAAGGCCAAA",8,134.57,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K56T S139K A145P C150W",4
"lib1","SARS-CoV-2","TGCTTTAACAAGCTAA",12,188.67,9.67,-1.1,0.07,2.71,1.12,0,"1 nonsynonymous","N120T",1
"lib1","SARS-CoV-2","TGCTTTAAGCGGCGGA",9,257.86,9.55,-1.21,0.08,2.49,1.06,0,">1 nonsynonymous","N64R Y121S S139T",3
"lib1","SARS-CoV-2","TGCTTTACCCAGTGAC",1,7.42,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15D Y39T S45T W106S",4
"lib1","SARS-CoV-2","TGCTTTACGCCTTCAA",3,10.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91A Y119C T201G",3
"lib1","SARS-CoV-2","TGCTTTCAGCGGAACG",2,21.93,10.74,-0.02,0.1,2.95,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGCTTTCCCAAATCAC",5,174.29,10.69,-0.07,0.05,2.9,1.05,0,">1 nonsynonymous","S41P N110K",2
"lib1","SARS-CoV-2","TGCTTTCCTGCGAATC",14,3.4,NA,NA,NA,NA,NA,NA,"stop","P82L G86K D98G N107M I138L Y159*",6
"lib1","SARS-CoV-2","TGCTTTCTCGTAGTCC",2,76.83,10.73,-0.03,0.07,2.94,1.03,0,"1 nonsynonymous","T140K",1
"lib1","SARS-CoV-2","TGCTTTGCCTCGGTAA",2,34.38,10.16,-0.6,0.07,2.85,1,0,">1 nonsynonymous","V37M Q79K",2
"lib1","SARS-CoV-2","TGCTTTGGTATTATGT",5,62.86,10.17,-0.6,0.07,2.75,1.02,0,">1 nonsynonymous","G9R S139M",2
"lib1","SARS-CoV-2","TGCTTTTAATTCGAAT",6,103.4,10.74,-0.02,0.08,2.89,1.04,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","TGCTTTTACCGTTACA",10,4.85,NA,NA,NA,NA,NA,NA,"stop","G9T F62* T85G Y91M",4
"lib1","SARS-CoV-2","TGCTTTTATAGACCCG",8,53.57,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","L5R A22R F44Y I80V F126V Q144Y",6
"lib1","SARS-CoV-2","TGCTTTTCCGAAAAAT",5,35.24,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N30C K94M F99L",3
"lib1","SARS-CoV-2","TGCTTTTCCTTAGGAT",6,36.47,7.83,-2.94,0.22,1.5,1.15,0.01,">1 nonsynonymous","K56L P96T V115C",3
"lib1","SARS-CoV-2","TGCTTTTGCAAGTAGA",2,14.57,7.75,-3.01,0.42,1.5,1.2,0.06,">1 nonsynonymous","V20L C195R",2
"lib1","SARS-CoV-2","TGCTTTTGGTAGATAG",1,129.37,9.55,-1.21,0.08,2.7,1.13,0,">1 nonsynonymous","G146Y E154P",2
"lib1","SARS-CoV-2","TGGAAAAAAGATCCAA",2,22.53,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","I28F V37N K48C D59K L131Q",5
"lib1","SARS-CoV-2","TGGAAAAAAGGGCACC",3,86.51,10.48,-0.29,0.05,2.91,1.03,0,">1 nonsynonymous","A81G P149M",2
"lib1","SARS-CoV-2","TGGAAAAAATATAAGT",2,20.18,9.77,-1,0.07,2.69,1.09,0,">1 nonsynonymous","I28V I142H",2
"lib1","SARS-CoV-2","TGGAAAAACAACGATT",1,13.34,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","L5V S29F G86S Y93D G174W",5
"lib1","SARS-CoV-2","TGGAAAAACCAAGGGA",3,106.13,6,-4.76,2,1.5,1.2,0.03,"1 nonsynonymous","C158F",1
"lib1","SARS-CoV-2","TGGAAAAATAGACTTA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","D34V T55S K132L G174*",4
"lib1","SARS-CoV-2","TGGAAAACACTACTTA",8,44.74,10.7,-0.06,0.11,2.87,1.09,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","TGGAAAAGGCCATACA",8,87.63,10.72,-0.04,0.06,2.91,1.07,0,">1 nonsynonymous","F134L E141D",2
"lib1","SARS-CoV-2","TGGAAAATACATGAAC",6,28.74,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","I2F I72H",2
"lib1","SARS-CoV-2","TGGAAAATATTAAGCG",3,0,NA,NA,NA,NA,NA,NA,"stop","V103* D112L",2
"lib1","SARS-CoV-2","TGGAAAATATTTATCC",6,27.59,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","T63I F99P G172M",3
"lib1","SARS-CoV-2","TGGAAAATCAATGCAA",3,19.56,6,-4.76,2,1.5,1.29,0.07,">1 nonsynonymous","C49W S113F Y119S R127S",4
"lib1","SARS-CoV-2","TGGAAAATGAACAACT",4,48.54,9.73,-1.03,0.1,2.33,1.04,0,">1 nonsynonymous","R16L Y39R G155Y",3
"lib1","SARS-CoV-2","TGGAAAATGATATTAA",2,14.11,8.05,-2.71,0.3,2.31,1.1,0.03,">1 nonsynonymous","V37T Y66S F167W",3
"lib1","SARS-CoV-2","TGGAAAATGCTACAAG",12,157.82,10.07,-0.7,0.07,2.57,1.06,0,">1 nonsynonymous","D34G D59Q N120R",3
"lib1","SARS-CoV-2","TGGAAAATTAGCTGGT",2,0.29,NA,NA,NA,NA,NA,NA,"stop","P82H D98W N130*",3
"lib1","SARS-CoV-2","TGGAAAATTGCGAAAC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","TGGAAACAAAAATTTA",9,167.63,10.71,-0.05,0.08,2.87,1.05,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","TGGAAACAAATTTCTC",1,32.77,8.17,-2.59,0.17,1.5,1.12,0.01,">1 nonsynonymous","A33E Q84H L122E P169T",4
"lib1","SARS-CoV-2","TGGAAACACCGCTGCG",1,28.37,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W23S Y35V S41E L122R C158L F185D",6
"lib1","SARS-CoV-2","TGGAAACACGCAATCA",9,134.92,10.66,-0.1,0.03,2.87,1.05,0,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","TGGAAACCACACTTAA",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P S147R",2
"lib1","SARS-CoV-2","TGGAAACCTTTCTGGC",2,31.53,7.72,-3.04,0.38,1.5,1.24,0.04,">1 nonsynonymous","I2F G86E T148S",3
"lib1","SARS-CoV-2","TGGAAACGATGATGTT",2,37.89,9.53,-1.23,0.15,2.32,1.11,0.01,">1 nonsynonymous","F134R P169Y",2
"lib1","SARS-CoV-2","TGGAAACGCAATGAAC",6,106.78,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9D C158P",2
"lib1","SARS-CoV-2","TGGAAACTTATTCTCC",8,46.53,10.2,-0.57,0.29,1.5,1.03,0.07,">1 nonsynonymous","A42S E76S K128P E135V S200H",5
"lib1","SARS-CoV-2","TGGAAAGATTGTAGAT",1,31.8,9.5,-1.26,0.13,1.94,1.11,0.01,">1 nonsynonymous","K26T L57H T85I N130E",4
"lib1","SARS-CoV-2","TGGAAAGCAACTCACA",2,0.68,NA,NA,NA,NA,NA,NA,"stop","S147M G174*",2
"lib1","SARS-CoV-2","TGGAAAGCAGGATTAC",4,85.38,8.98,-1.79,0.07,2.62,1.12,0,">1 nonsynonymous","S41K N130P P161T",3
"lib1","SARS-CoV-2","TGGAAAGCCTGATAAT",10,123.75,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","D34S L60Q F70I G196Y T201E",5
"lib1","SARS-CoV-2","TGGAAAGGAAGTAGGA",6,69.66,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F12N F126A F167S",3
"lib1","SARS-CoV-2","TGGAAAGGCAGACTTA",1,21.88,6.51,-4.26,0.54,1.5,1.1,0.03,">1 nonsynonymous","N4T E10L L57F I138H G155L",5
"lib1","SARS-CoV-2","TGGAAAGTACAGGGCA",3,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R D34A V77K V103L",4
"lib1","SARS-CoV-2","TGGAAAGTATTCCGAT",5,71.28,10.61,-0.15,0.03,2.91,1.04,0,"1 nonsynonymous","N64I",1
"lib1","SARS-CoV-2","TGGAAAGTCGAAATCT",3,15.55,10.77,0.01,0.06,3,1,0,"1 nonsynonymous","A14S",1
"lib1","SARS-CoV-2","TGGAAAGTCGACGCCA",1,33.3,10.53,-0.24,0.07,2.89,1.08,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","TGGAAATAGTCTACCT",2,70.37,9.97,-0.8,0.06,2.94,1,0,"1 nonsynonymous","Q176H",1
"lib1","SARS-CoV-2","TGGAAATATCTAGCGC",7,34.9,8.81,-1.96,0.2,1.5,1.14,0.02,">1 nonsynonymous","L5W S69V K87L H189L",4
"lib1","SARS-CoV-2","TGGAAATATGGCCTAT",5,25.49,10.73,-0.03,0.06,2.92,1.03,0,">1 nonsynonymous","I2S D97F",2
"lib1","SARS-CoV-2","TGGAAATCCGACAAGT",2,16.1,9.37,-1.39,0.13,1.74,1.14,0.01,">1 nonsynonymous","A89N I104L T140N",3
"lib1","SARS-CoV-2","TGGAAATCGCTTGCAT",7,64.64,9.67,-1.09,0.18,1.74,1.19,0.01,">1 nonsynonymous","A14G L38A H189N",3
"lib1","SARS-CoV-2","TGGAAATCGCTTTATT",1,32.36,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","G86D T140D L162S",3
"lib1","SARS-CoV-2","TGGAAATGTAAATAGA",2,109.59,10.39,-0.37,0.04,2.87,1.02,0,"1 nonsynonymous","Q84Y",1
"lib1","SARS-CoV-2","TGGAACAAAATGACGT",1,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y R16G N64T D90L D98S",5
"lib1","SARS-CoV-2","TGGAACAACAATTTAC",5,83.13,10.12,-0.65,0.07,2.45,1.03,0,">1 nonsynonymous","V37L V77R",2
"lib1","SARS-CoV-2","TGGAACAAGATGTACT",2,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L L95P E141L P149M",4
"lib1","SARS-CoV-2","TGGAACAAGATTCGTT",8,0.24,NA,NA,NA,NA,NA,NA,"stop","P7L E10* K26* T63F Q79H F167C",6
"lib1","SARS-CoV-2","TGGAACAATCCTCAAC",9,101.3,10.51,-0.26,0.06,2.86,1.05,0,">1 nonsynonymous","V115M N130F",2
"lib1","SARS-CoV-2","TGGAACACAATCGAGG",6,95.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R124C S147A",2
"lib1","SARS-CoV-2","TGGAACACGTGAGACA",3,23.58,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","N13E K128P R179V",3
"lib1","SARS-CoV-2","TGGAACAGTCACCGAT",4,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W G101M R124C R179T",4
"lib1","SARS-CoV-2","TGGAACATGAAGAGTA",3,16.89,NA,NA,NA,NA,NA,NA,"stop","T100* R136N P191Q",3
"lib1","SARS-CoV-2","TGGAACATGCCTGTCG",8,42.02,6,-4.76,2,1.5,1.22,0.01,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","TGGAACATTAACCTTA",2,6.48,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49Y C61S Q84L Y93A N107A I142P Q176T P191L",8
"lib1","SARS-CoV-2","TGGAACATTGACGAAT",2,54.71,9.88,-0.88,0.08,2.73,1.05,0,">1 nonsynonymous","C61I P96D",2
"lib1","SARS-CoV-2","TGGAACCAAAAAGTCA",6,66.82,8.73,-2.03,0.09,2.33,1.08,0,">1 nonsynonymous","K94L L125S",2
"lib1","SARS-CoV-2","TGGAACCAATTAGTAA",2,14.68,8.33,-2.43,0.16,2.63,1.14,0.01,">1 nonsynonymous","D98N Q168K",2
"lib1","SARS-CoV-2","TGGAACCACCAGATCA",3,89.74,6.02,-4.74,0.67,1.5,1.15,0.01,">1 nonsynonymous","V20Y K26R I72E A81G N107Y Q176S",6
"lib1","SARS-CoV-2","TGGAACCCCCAAACCT",8,32.82,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","T15W L60S R127K K199C",4
"lib1","SARS-CoV-2","TGGAACCTTGACATAG",3,82.66,10.8,0.03,0.06,2.93,1.06,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TGGAACGAAATCTGAC",6,108.19,10.09,-0.68,0.05,2.94,1,0,">1 nonsynonymous","N1I Y39L F126V",3
"lib1","SARS-CoV-2","TGGAACGAAGTAAGGT",5,0,NA,NA,NA,NA,NA,NA,"stop","S19V D98* Q168P",3
"lib1","SARS-CoV-2","TGGAACGACAACTAGT",3,10.33,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16W F44H G51E I72W L95R E141S G152S",7
"lib1","SARS-CoV-2","TGGAACGACCGTTCTT",2,24.32,10.28,-0.49,0.05,2.95,1.02,0,"1 nonsynonymous","A14E",1
"lib1","SARS-CoV-2","TGGAACGAGTAAAAAT",10,80.25,10.71,-0.05,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGAACGGGAATGCCT",1,0.84,NA,NA,NA,NA,NA,NA,"stop","S45H Y50* T55N G116M G152V",5
"lib1","SARS-CoV-2","TGGAACTAAATCTTTC",9,108.54,10.75,-0.02,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGAACTGTAAACAAC",4,55.38,10.28,-0.49,0.07,2.83,1,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","TGGAACTTAAGGCAAC",5,46.45,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S69R A81Y Y165S",3
"lib1","SARS-CoV-2","TGGAACTTACTTGGAT",4,54.15,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S36R N157S C158I T170R S184K",5
"lib1","SARS-CoV-2","TGGAAGAAAATAAGGC",3,156.78,10.85,0.08,0.07,2.93,1.02,0,"1 nonsynonymous","L122N",1
"lib1","SARS-CoV-2","TGGAAGAAAATCCGGT",2,14,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L60N G83V D97C N107T E135L",5
"lib1","SARS-CoV-2","TGGAAGAACGACCACT",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y A33L D97L K199Y",4
"lib1","SARS-CoV-2","TGGAAGACATACAAGG",20,180.34,10.65,-0.12,0.02,2.92,1,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","TGGAAGACGTATTCCC",7,100.95,10.69,-0.08,0.05,2.94,1.02,0,"1 nonsynonymous","T15K",1
"lib1","SARS-CoV-2","TGGAAGACTAACGGCA",4,48,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","P7I K26R V37C V103G F126H",5
"lib1","SARS-CoV-2","TGGAAGAGATTTCAGG",1,8.4,6,-4.76,1.61,1.5,1.08,0.01,">1 nonsynonymous","C102V R136I V153Y",3
"lib1","SARS-CoV-2","TGGAAGCAAATTTTAA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","T63A Q84W V180*",3
"lib1","SARS-CoV-2","TGGAAGCACCCCTTAT",1,11.94,7.79,-2.97,0.27,1.5,1.11,0.04,">1 nonsynonymous","L5V F12H D90S K128A T201V",5
"lib1","SARS-CoV-2","TGGAAGCATCTGGAGG",1,9.58,10.95,0.19,0.1,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGAAGGAAATACGTA",2,8.21,6,-4.76,2,3,1.15,0.04,">1 nonsynonymous","C61G F99S P133A Q144S P149N N171Y",6
"lib1","SARS-CoV-2","TGGAAGGAATCCATGT",2,100.32,10.79,0.03,0.06,2.93,1.03,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","TGGAAGTCATGATAAA",7,49.74,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P7T Y21V C31I Y50R N92L",5
"lib1","SARS-CoV-2","TGGAAGTGTCGATCCT",6,12.44,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12S A42L D90N D98L",4
"lib1","SARS-CoV-2","TGGAAGTTTCTTCACG",1,13.18,10.73,-0.03,0.13,2.72,1.2,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGGAATAACTCAGTAA",15,87.93,6,-4.76,1.25,1.5,1.11,0,">1 nonsynonymous","I28A S41N C49W C61N K94A F160G N171Y",7
"lib1","SARS-CoV-2","TGGAATAAGAATCTCT",3,31.7,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","K56M P82A Y119S I142C T201I",5
"lib1","SARS-CoV-2","TGGAATACAAACTAAG",5,120.29,10.8,0.04,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGAATACACCCTGAT",3,41.03,6.24,-4.52,0.83,1.5,1.25,0.02,">1 nonsynonymous","I28C C61S A89I",3
"lib1","SARS-CoV-2","TGGAATACTATAGATA",5,0.1,NA,NA,NA,NA,NA,NA,"stop","C31S V52N L60* R124E L131F",5
"lib1","SARS-CoV-2","TGGAATAGGTGGCCTA",1,21.87,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9R F44S G51V N58P T100R C150D G172S",7
"lib1","SARS-CoV-2","TGGAATATTAAACCAA",4,35.36,9.86,-0.91,0.11,1.85,1.08,0,">1 nonsynonymous","N64L N92S A192T K199T",4
"lib1","SARS-CoV-2","TGGAATATTACAATAA",2,11.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29F N58R N151C R179M",4
"lib1","SARS-CoV-2","TGGAATCCACACACAA",3,85.37,7.69,-3.08,0.22,1.7,1.09,0.02,">1 nonsynonymous","F44E Y143C T148S V173L T201I",5
"lib1","SARS-CoV-2","TGGAATCCTTTTGCCC",3,2.74,NA,NA,NA,NA,NA,NA,"stop","V37* T55E F99Y N107I Q163F L188Y",6
"lib1","SARS-CoV-2","TGGAATCGCAGCACGG",5,42.67,6.46,-4.31,0.52,1.5,1.18,0.03,">1 nonsynonymous","I2T G86F",2
"lib1","SARS-CoV-2","TGGAATCGCTACCACT",5,53.6,10.64,-0.13,0.06,2.83,1.07,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","TGGAATCGTTAAGGAA",6,488.38,6,-4.76,1.8,1.5,1.13,0.01,">1 nonsynonymous","A105S F167C P197K",3
"lib1","SARS-CoV-2","TGGAATCTCCACGCCA",1,62.08,6.24,-4.53,0.38,1.5,1.12,0.01,">1 nonsynonymous","N4Y S29L S139C Q176R",4
"lib1","SARS-CoV-2","TGGAATCTGAAAGTTT",5,102.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R27E D137F P177M",3
"lib1","SARS-CoV-2","TGGAATGAGCAATCGA",6,70.75,10.64,-0.12,0.03,2.9,1.01,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","TGGAATGCAAACCCAT",4,41.27,10.62,-0.14,0.08,2.86,1.04,0,">1 nonsynonymous","E10D R78Y G83F",3
"lib1","SARS-CoV-2","TGGAATGCAAATAAAA",5,57.32,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","K48V A89Y K114F L122R N151L",5
"lib1","SARS-CoV-2","TGGAATGCCCTAGTAG",7,48.51,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","S69G K87F P96T K128A",4
"lib1","SARS-CoV-2","TGGAATGCTAGTTTTA",2,10.29,6,-4.76,2,3,1.07,0,">1 nonsynonymous","N30A Y50L N64L",3
"lib1","SARS-CoV-2","TGGAATGGTACATTGT",1,12.72,6,-4.76,2,3,1.13,0,">1 nonsynonymous","S45L G51L W106R",3
"lib1","SARS-CoV-2","TGGAATGTCCTTTCAG",3,1.73,NA,NA,NA,NA,NA,NA,"stop","Q79* G83D P96Q L122K",4
"lib1","SARS-CoV-2","TGGAATGTGTAGAACC",2,44.75,9.6,-1.17,0.12,1.81,1.16,0,">1 nonsynonymous","Y39V C49V V173D",3
"lib1","SARS-CoV-2","TGGAATTAAATTATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8S S53* L60I S200Q",4
"lib1","SARS-CoV-2","TGGAATTACCTAGAGC",1,21.41,8.43,-2.33,0.18,2.26,1.05,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","TGGAATTCACAGCATG",2,0.96,NA,NA,NA,NA,NA,NA,"stop","R27M I72F Y91K T100A P149* T201R",6
"lib1","SARS-CoV-2","TGGAATTTCTTCCTAA",2,31.55,10.69,-0.07,0.07,2.88,1.08,0,"1 nonsynonymous","D97P",1
"lib1","SARS-CoV-2","TGGAATTTGAACTTAA",2,8.36,10.32,-0.45,0.24,2.55,1.24,0.03,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","TGGACAAACCATCCCT",1,11.26,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","E10L C150V",2
"lib1","SARS-CoV-2","TGGACAAAGAAGTTGG",1,23.35,6,-4.76,1.75,1.5,1.27,0.04,"1 nonsynonymous","F70I",1
"lib1","SARS-CoV-2","TGGACAAAGGAGACAT",11,1.91,NA,NA,NA,NA,NA,NA,"stop","D68F K87* L95R P149Q",4
"lib1","SARS-CoV-2","TGGACAAGAATCTATC",3,5.26,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N64L D98E W106L L125F D137A N151H G174W A190G",8
"lib1","SARS-CoV-2","TGGACAAGATTCTGGT",4,0.92,NA,NA,NA,NA,NA,NA,"stop","T3L A42G T148* T193S",4
"lib1","SARS-CoV-2","TGGACAATAAAATTGA",9,58.69,9.44,-1.33,0.14,1.5,1.14,0.01,">1 nonsynonymous","W23R N171Y",2
"lib1","SARS-CoV-2","TGGACAATAAGGCAAT",6,31.01,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A33F D68R R127N",3
"lib1","SARS-CoV-2","TGGACAATATGTTTGC",1,28.19,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F12Q L38Q A42C E135P Y143L T201N",6
"lib1","SARS-CoV-2","TGGACAATGAGGCGAT",4,156.34,10.77,0,0.06,2.91,1.05,0,">1 nonsynonymous","N4T L122N",2
"lib1","SARS-CoV-2","TGGACACAACACAAAT",4,104.59,10.72,-0.05,0.06,2.89,1.07,0,"1 nonsynonymous","S29G",1
"lib1","SARS-CoV-2","TGGACACACGCCATAC",12,55.29,7.02,-3.74,0.42,1.5,1.07,0.03,">1 nonsynonymous","T3F A33V L131H Y143F P149L",5
"lib1","SARS-CoV-2","TGGACACACTGTTACT",4,0.55,NA,NA,NA,NA,NA,NA,"stop","G9M L57K F99T F160*",4
"lib1","SARS-CoV-2","TGGACACAGCAGACAT",4,30.26,10.18,-0.58,0.06,2.75,1,0,">1 nonsynonymous","R16T L57S N64L",3
"lib1","SARS-CoV-2","TGGACACCTTCTTATT",2,31.34,10.67,-0.09,0.03,2.97,1,0,"1 nonsynonymous","G83S",1
"lib1","SARS-CoV-2","TGGACACGATCCTATT",2,8.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86N P96Q",2
"lib1","SARS-CoV-2","TGGACACTTGAATACA",8,83.66,10.3,-0.46,0.06,2.87,1.03,0,">1 nonsynonymous","T3H S41R D97E N110Q",4
"lib1","SARS-CoV-2","TGGACAGAGTAATCAT",6,177.64,6.35,-4.42,0.35,1.5,1.14,0.01,"1 nonsynonymous","P177V",1
"lib1","SARS-CoV-2","TGGACAGGAAACGAGA",3,82.72,8.66,-2.11,0.13,2.62,1.09,0.01,">1 nonsynonymous","Y35T I142F Y159H",3
"lib1","SARS-CoV-2","TGGACAGGAACTACCT",2,10.94,9.03,-1.73,0.22,2.32,1.09,0.02,">1 nonsynonymous","T15N N107R K199H",3
"lib1","SARS-CoV-2","TGGACAGGACTAATAG",2,17.39,9.37,-1.4,0.18,1.94,1.23,0.02,">1 nonsynonymous","T63C E141P L183F",3
"lib1","SARS-CoV-2","TGGACAGGCAACGAGT",7,47.28,6.86,-3.91,0.31,1.5,1.04,0.02,"1 nonsynonymous","K94W",1
"lib1","SARS-CoV-2","TGGACAGGGAAAACTA",4,71.81,10.78,0.01,0.08,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGACAGTAGATAACA",11,91.05,9.42,-1.34,0.09,2.02,1.11,0,">1 nonsynonymous","S45T K94Y T100V K114Q",4
"lib1","SARS-CoV-2","TGGACATAGCAGAATT",3,10.83,10.24,-0.52,0.15,2.83,1.14,0.01,"1 nonsynonymous","T3W",1
"lib1","SARS-CoV-2","TGGACATATACACCGC",10,57.22,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N64L G101S N118V A192E",4
"lib1","SARS-CoV-2","TGGACATCCGTAGAAA",2,102.04,9.21,-1.55,0.07,2.69,1.12,0,">1 nonsynonymous","C6V K132S G174E H189N",4
"lib1","SARS-CoV-2","TGGACATCTGACAACA",2,35.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L Y66F G86Y E141S",4
"lib1","SARS-CoV-2","TGGACATGCCCTGCAC",1,33.07,10.11,-0.66,0.13,2.16,1,0.01,">1 nonsynonymous","A18T F44R G146S",3
"lib1","SARS-CoV-2","TGGACATGGGTAAATT",5,75.69,10.62,-0.15,0.05,2.93,1,0,">1 nonsynonymous","F8L N151T",2
"lib1","SARS-CoV-2","TGGACATTTGAATCGT",5,32.67,6.61,-4.15,0.5,1.5,1.22,0.02,">1 nonsynonymous","F17L S41D V71W K199M",4
"lib1","SARS-CoV-2","TGGACATTTGTTACAC",6,19.52,6,-4.76,1.47,1.5,1.19,0.01,">1 nonsynonymous","C61A P82Q W106S C158M",4
"lib1","SARS-CoV-2","TGGACCAAAAAGAGCC",2,33.75,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","N1L V11G R25P K56Y Y178C",5
"lib1","SARS-CoV-2","TGGACCAACTTCCGAG",12,189.74,10.52,-0.24,0.03,2.93,1.02,0,"1 nonsynonymous","F44H",1
"lib1","SARS-CoV-2","TGGACCAAGACCTGTA",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q A33L T55F C61A D68L",5
"lib1","SARS-CoV-2","TGGACCACCAATCCAG",1,24.52,8.51,-2.25,0.16,2.87,1.06,0.01,">1 nonsynonymous","N64Y K87D Y119H K128H",4
"lib1","SARS-CoV-2","TGGACCAGGACATAAA",5,3.46,NA,NA,NA,NA,NA,NA,"stop","K56R S113T K199*",3
"lib1","SARS-CoV-2","TGGACCAGTTAGTCAA",6,86.86,10.69,-0.07,0.06,2.87,1.07,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","TGGACCATTATTTAAG",1,15.04,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","K56C F62V K87L S113L N120L L183F",6
"lib1","SARS-CoV-2","TGGACCATTCATGTTA",2,67.01,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D59L A89Y Y119L",3
"lib1","SARS-CoV-2","TGGACCCAAAGAAAAG",3,12.03,11.04,0.28,0.09,2.96,1.01,0.01,"1 nonsynonymous","V173F",1
"lib1","SARS-CoV-2","TGGACCCATTAGTCAC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","R16* N92Y G174F",3
"lib1","SARS-CoV-2","TGGACCCCGTTATTAA",8,56.03,8.18,-2.59,0.18,2.13,1.13,0.01,">1 nonsynonymous","N30A S41K K56R Y91L F156D T201M",6
"lib1","SARS-CoV-2","TGGACCCTCAACGTGT",4,49.11,7.38,-3.39,0.35,1.5,1.14,0.04,">1 nonsynonymous","L38Y L57M Y91R P149E G152V",5
"lib1","SARS-CoV-2","TGGACCCTTAGACGGG",15,363.53,9.41,-1.35,0.07,2.8,1.07,0,">1 nonsynonymous","P149A E154F",2
"lib1","SARS-CoV-2","TGGACCGGGTATACGG",2,0.63,NA,NA,NA,NA,NA,NA,"stop","Y21G F62L V77T S129V F167I Q176*",6
"lib1","SARS-CoV-2","TGGACGAAAAACAAAG",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67P G116I R124T",3
"lib1","SARS-CoV-2","TGGACGAAGCTATAAA",9,69.33,8.39,-2.37,0.14,1.59,1.12,0.01,">1 nonsynonymous","C61S Y165N",2
"lib1","SARS-CoV-2","TGGACGAATTATCGGT",1,50.51,8.09,-2.67,0.18,1.5,1.09,0.01,">1 nonsynonymous","D75P L95V T148A A192Q",4
"lib1","SARS-CoV-2","TGGACGACTCGCCTAG",7,32.66,9.18,-1.58,0.23,1.65,1.17,0.03,"1 nonsynonymous","A67H",1
"lib1","SARS-CoV-2","TGGACGAGTTTGCTAC",4,23.66,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V11Y C150F",2
"lib1","SARS-CoV-2","TGGACGATAATCACGA",3,1.99,NA,NA,NA,NA,NA,NA,"stop","V37G A89K K94S L122*",4
"lib1","SARS-CoV-2","TGGACGATGGCAAAAA",3,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81D G86I",2
"lib1","SARS-CoV-2","TGGACGCATTATAATG",9,60.6,7.74,-3.03,0.15,1.61,1.08,0.01,">1 nonsynonymous","S45E P54S G86T L188C",4
"lib1","SARS-CoV-2","TGGACGCGATGGAAAA",1,84.84,10.11,-0.65,0.07,2.75,1.06,0,">1 nonsynonymous","N1R Q176M",2
"lib1","SARS-CoV-2","TGGACGCTAAATAGAA",8,1.29,NA,NA,NA,NA,NA,NA,"stop","N24F S164*",2
"lib1","SARS-CoV-2","TGGACGCTCCTGACCG",8,100.7,10.11,-0.66,0.07,2.55,1.02,0,">1 nonsynonymous","R25S S45E P191D",3
"lib1","SARS-CoV-2","TGGACGGTCTGAACTG",2,28.48,8.36,-2.4,0.21,2.1,1.1,0.02,">1 nonsynonymous","C61W S113M",2
"lib1","SARS-CoV-2","TGGACGTACGCACCCG",6,35.23,6.19,-4.57,0.77,1.5,1.2,0.02,">1 nonsynonymous","A14I S19Q E141C",3
"lib1","SARS-CoV-2","TGGACGTTTTGTGAGA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","F17K Y175*",2
"lib1","SARS-CoV-2","TGGACTAAAATTACAA",1,26.89,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y123L Y143C F167S",3
"lib1","SARS-CoV-2","TGGACTAAACATAAAC",3,97.44,10.16,-0.6,0.05,2.84,1.02,0,"1 nonsynonymous","G51M",1
"lib1","SARS-CoV-2","TGGACTAAATCAAAAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","D90S A105L S129*",3
"lib1","SARS-CoV-2","TGGACTATATCCCCTT",3,11.1,6,-4.76,2,3,1.05,0,">1 nonsynonymous","C6A N157S Y165R",3
"lib1","SARS-CoV-2","TGGACTATTGTTATAT",5,207.46,9.55,-1.21,0.15,1.68,1.06,0.01,">1 nonsynonymous","F44L R136S H189Y",3
"lib1","SARS-CoV-2","TGGACTCAGTAGCTAG",5,11.57,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","C49D I104R L131S F156I",4
"lib1","SARS-CoV-2","TGGACTCCAGCCGGCA",1,35.93,10.4,-0.37,0.07,2.97,1,0,">1 nonsynonymous","P54E G116Y",2
"lib1","SARS-CoV-2","TGGACTCGTCTCCCCG",7,0.74,NA,NA,NA,NA,NA,NA,"stop","K87S T148S T170* Q176P V182M",5
"lib1","SARS-CoV-2","TGGACTCTCGAAAACA",4,0.42,NA,NA,NA,NA,NA,NA,"stop","S41* Y119T",2
"lib1","SARS-CoV-2","TGGACTCTTAAAACGC",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y165C R179I",2
"lib1","SARS-CoV-2","TGGACTGAGAAAAAAT",1,12.7,6.9,-3.86,0.44,1.5,1.05,0.06,">1 nonsynonymous","L38E Q79W A105L",3
"lib1","SARS-CoV-2","TGGACTGAGACATGAC",1,15.47,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G86T L95Y Q168P T201N",4
"lib1","SARS-CoV-2","TGGACTGCGAATGAAA",1,25.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C6S N40P K94D V103R Y119T Y143S F160S G166L",8
"lib1","SARS-CoV-2","TGGACTTGGACTCACC",13,167.53,10.25,-0.51,0.05,2.74,1.01,0,"1 nonsynonymous","T100D",1
"lib1","SARS-CoV-2","TGGACTTTATCTCATC",3,125.48,10.68,-0.09,0.04,2.98,1.01,0,">1 nonsynonymous","F44Y C61R",2
"lib1","SARS-CoV-2","TGGACTTTTTCGATTC",2,68.11,7.32,-3.45,0.16,2.26,1.13,0.01,">1 nonsynonymous","C150D K198G",2
"lib1","SARS-CoV-2","TGGAGAAAACCTTCGG",3,60.48,10.68,-0.09,0.06,2.92,1.04,0,">1 nonsynonymous","L60V K114R",2
"lib1","SARS-CoV-2","TGGAGAAACCATGCAT",2,69.28,9.73,-1.03,0.05,2.8,1.08,0,"1 nonsynonymous","I142N",1
"lib1","SARS-CoV-2","TGGAGAAATTTCCCCA",1,24.72,9.5,-1.27,0.15,1.98,1.11,0.01,">1 nonsynonymous","F12Y P149I",2
"lib1","SARS-CoV-2","TGGAGAACCAAAGAGA",4,39.36,6,-4.76,2,1.5,1.28,0.05,">1 nonsynonymous","K26P E135A Q168V",3
"lib1","SARS-CoV-2","TGGAGAATAAAGTTGC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","N1D T15F T55*",3
"lib1","SARS-CoV-2","TGGAGAATACTCTATT",1,9.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F44L W106E G166M T170L",4
"lib1","SARS-CoV-2","TGGAGAATCTGCATTT",3,26.44,7.04,-3.72,0.43,1.5,1.08,0.04,">1 nonsynonymous","A22V L60A F99M D112K",4
"lib1","SARS-CoV-2","TGGAGAATTTTAATAT",3,21.22,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D59T P82S I88G Y119L L131W",5
"lib1","SARS-CoV-2","TGGAGACAAAACTCGC",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y P54N P161C F185L",4
"lib1","SARS-CoV-2","TGGAGACAGCTAGAAA",3,21.35,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","S45Q Y50T P96H L131K",4
"lib1","SARS-CoV-2","TGGAGACATAGAAGGT",2,6.68,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","S19L A33P S69G N107L G146Y P169C",6
"lib1","SARS-CoV-2","TGGAGACCATAAACTA",4,16.26,9.48,-1.28,0.23,1.57,1.03,0.03,">1 nonsynonymous","A14S D34Q G51H C61M",4
"lib1","SARS-CoV-2","TGGAGACCCAAGATGA",4,58.82,9.96,-0.81,0.1,2.43,1.01,0,">1 nonsynonymous","F47V D97P A105G P197H",4
"lib1","SARS-CoV-2","TGGAGAGCAGACACAC",1,0.62,NA,NA,NA,NA,NA,NA,"stop","T85* P96H P133E V182E",4
"lib1","SARS-CoV-2","TGGAGAGCCCCATACA",6,9.94,6.65,-4.11,0.47,1.5,1.03,0.03,">1 nonsynonymous","A18F W23R P96L",3
"lib1","SARS-CoV-2","TGGAGAGTAGCTTATC",5,44.13,6.64,-4.12,0.28,1.5,1.09,0.01,">1 nonsynonymous","V37L T63C Y159R",3
"lib1","SARS-CoV-2","TGGAGAGTTCAAGTTT",3,38.33,9.95,-0.81,0.09,2.11,1.02,0,">1 nonsynonymous","G9K A81V N109R",3
"lib1","SARS-CoV-2","TGGAGATAACGCGCTG",2,20.29,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A81P K87H G152L S184R",4
"lib1","SARS-CoV-2","TGGAGATAACTACAGT",1,16.04,9.71,-1.05,0.21,1.64,1.09,0.02,"1 nonsynonymous","W106G",1
"lib1","SARS-CoV-2","TGGAGATATGTACGAA",3,16.94,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","I80K V103S F160S",3
"lib1","SARS-CoV-2","TGGAGATCTAATATTA",2,17.85,10.65,-0.11,0.08,2.85,1.1,0,"1 nonsynonymous","T140F",1
"lib1","SARS-CoV-2","TGGAGATGCCATAGTG",8,71.78,10.73,-0.03,0.06,2.95,1.03,0,">1 nonsynonymous","V37G Q84M",2
"lib1","SARS-CoV-2","TGGAGATTCTTCTAAA",5,6,NA,NA,NA,NA,NA,NA,"stop","R16G A89R L95* F99R Q176E",5
"lib1","SARS-CoV-2","TGGAGCAAATATATAC",1,35.61,6,-4.76,2,1.5,1.19,0.07,">1 nonsynonymous","K26Q S36M I72K D97I",4
"lib1","SARS-CoV-2","TGGAGCAACTGTGAAT",5,49.81,10.08,-0.68,0.06,2.84,1.03,0,">1 nonsynonymous","S29M K48R D59N D97Y",4
"lib1","SARS-CoV-2","TGGAGCATAGTACATT",1,21.04,10.88,0.11,0.05,2.95,1,0,"1 nonsynonymous","G152Q",1
"lib1","SARS-CoV-2","TGGAGCATGTTCTGTA",11,68.09,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","A105E V115A Y121K",3
"lib1","SARS-CoV-2","TGGAGCCACTTAGACG",2,23.64,10.77,0.01,0.1,2.87,1.1,0,"1 nonsynonymous","N1E",1
"lib1","SARS-CoV-2","TGGAGCCAGGAAACTA",2,10.16,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","G86W F99R N107F Y165F P197V",5
"lib1","SARS-CoV-2","TGGAGCGATATTAACG",3,33.7,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","P96M N151I",2
"lib1","SARS-CoV-2","TGGAGCGCCACTGACC",1,8.64,10.79,0.03,0.06,2.89,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TGGAGCTTACTTTAAC",1,69.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V71E P177T T201I",3
"lib1","SARS-CoV-2","TGGAGCTTGACCTCAG",5,39.95,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","D34S N58V V71N L122T E135S H189Q",6
"lib1","SARS-CoV-2","TGGAGCTTTTTGGCGC",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V V173S",2
"lib1","SARS-CoV-2","TGGAGGACAACCATAT",11,49.56,6.07,-4.69,1.4,1.5,1.27,0.04,">1 nonsynonymous","T15M S41R K56I Y121S",4
"lib1","SARS-CoV-2","TGGAGGACCGTTCTAA",9,59.1,8.61,-2.16,0.23,1.5,1.09,0.03,">1 nonsynonymous","N64L V77F",2
"lib1","SARS-CoV-2","TGGAGGACTCGAATAT",2,46.34,10.78,0.02,0.12,2.72,1.08,0.01,">1 nonsynonymous","V37G Q84M",2
"lib1","SARS-CoV-2","TGGAGGATAAAGGGGA",8,108.85,10.71,-0.06,0.04,2.89,1.07,0,">1 nonsynonymous","R27K K56L N64F E141R P197T",5
"lib1","SARS-CoV-2","TGGAGGATAATACAAT",13,136.14,6.19,-4.57,0.52,1.5,1.17,0.01,">1 nonsynonymous","V37K W106A E135C A192I",4
"lib1","SARS-CoV-2","TGGAGGCAAGCACAAG",4,3.41,NA,NA,NA,NA,NA,NA,"stop","T3N F12L A42* P82K G152D Q176L",6
"lib1","SARS-CoV-2","TGGAGGGGGGCAACCC",1,0.11,NA,NA,NA,NA,NA,NA,"stop","T3* T15* T55D L95I W106C K198*",6
"lib1","SARS-CoV-2","TGGAGGGTGACTATCT",10,191.6,8.77,-1.99,0.06,2.76,1.07,0,">1 nonsynonymous","Y119R F156N",2
"lib1","SARS-CoV-2","TGGAGGGTGTCTACGA",4,18.37,10.62,-0.15,0.06,2.89,1.09,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","TGGAGGTCAACATAAT",4,37.69,10.66,-0.1,0.1,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGAGGTCACCTCTAA",1,10.79,10.58,-0.19,0.13,2.8,1.17,0.01,">1 nonsynonymous","G9E S129C T201G",3
"lib1","SARS-CoV-2","TGGAGGTTCAACTGAG",4,14.26,8.15,-2.61,0.18,1.79,1.05,0.01,">1 nonsynonymous","S45H Y119S S139F",3
"lib1","SARS-CoV-2","TGGAGTACAGAATGAA",1,7.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6T R73T S139P T148R",4
"lib1","SARS-CoV-2","TGGAGTACCCTACGCT",3,25.39,8.34,-2.42,0.28,1.76,1.18,0.03,">1 nonsynonymous","K48R I104L Y165S T201S",4
"lib1","SARS-CoV-2","TGGAGTATAGAAACGC",2,36.37,7.34,-3.43,0.24,1.5,1.09,0.02,">1 nonsynonymous","L38Q E135K",2
"lib1","SARS-CoV-2","TGGAGTCACGAGACTG",5,23.69,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","D112A S129N G152C",3
"lib1","SARS-CoV-2","TGGAGTCGCCATCTAA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","L95C S108K E154*",3
"lib1","SARS-CoV-2","TGGAGTCTATCTCTTT",8,85.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L95C R127I S184C",3
"lib1","SARS-CoV-2","TGGAGTGCTTCCCAAT",2,54,9.51,-1.26,0.23,1.5,1.19,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","TGGAGTTAAGACCGTT",4,18.84,8.17,-2.59,0.27,1.5,1.1,0.03,">1 nonsynonymous","D75G V103T",2
"lib1","SARS-CoV-2","TGGAGTTAGCACTAAC",1,0.35,NA,NA,NA,NA,NA,NA,"stop","L95W I104V P149*",3
"lib1","SARS-CoV-2","TGGAGTTATAGAGGCC",1,15.46,9.73,-1.03,0.06,3,1,0,">1 nonsynonymous","I28Y V52D N110E G174R",4
"lib1","SARS-CoV-2","TGGAGTTCTATCGCAA",3,32.66,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y35T N120F L162Y T201P",4
"lib1","SARS-CoV-2","TGGATAAAACAGCCTG",2,11.29,10.13,-0.63,0.13,2.81,1.02,0.01,"1 nonsynonymous","C6Q",1
"lib1","SARS-CoV-2","TGGATAAAAGACGTAT",2,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M F62L G101S S113G G155S L183W",6
"lib1","SARS-CoV-2","TGGATAAAATACCGAC",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L D90N V173K",3
"lib1","SARS-CoV-2","TGGATAAACAATAGGG",1,6.48,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","V77K D97H C102V",3
"lib1","SARS-CoV-2","TGGATAAATAACTCTA",1,10.12,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","TGGATAAATCACCAAA",4,2.32,NA,NA,NA,NA,NA,NA,"stop","T3G F44* G51S I104L N118L G174V P177L",7
"lib1","SARS-CoV-2","TGGATAACTCGCGTCC",10,88.59,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86E G116N Y159C P197T",4
"lib1","SARS-CoV-2","TGGATAAGAAATTCAA",1,12.38,10.03,-0.73,0.26,1.5,1,0.04,">1 nonsynonymous","G9P C49Y D97S L122K",4
"lib1","SARS-CoV-2","TGGATAAGAGAGCTAT",2,41.66,9.47,-1.29,0.14,1.71,1.2,0.01,">1 nonsynonymous","V11W A81G F134A N171A",4
"lib1","SARS-CoV-2","TGGATAATCCAGTACG",1,34.65,10.12,-0.64,0.06,2.66,1,0,">1 nonsynonymous","S45Q A89C F160R",3
"lib1","SARS-CoV-2","TGGATAATTGGCTCTT",3,10.63,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6S T63L Y165K",3
"lib1","SARS-CoV-2","TGGATAATTTTTAAGC",2,22.7,10.05,-0.72,0.11,2.69,1,0,">1 nonsynonymous","N13S D98S K198R",3
"lib1","SARS-CoV-2","TGGATACAGCTTTATG",1,38.5,10.74,-0.03,0.08,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATACATAAACCAT",1,31.14,10.34,-0.43,0.07,2.84,1.13,0,"1 nonsynonymous","A81R",1
"lib1","SARS-CoV-2","TGGATAGACCAAAGAA",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q F44S G101N",3
"lib1","SARS-CoV-2","TGGATAGCAAACTAAA",10,94.51,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V37E F99S T170Y",3
"lib1","SARS-CoV-2","TGGATAGCGCATAGGC",4,15.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N4M S19K V37N V103L E154C L183R P191M",7
"lib1","SARS-CoV-2","TGGATAGGAAGCACAC",1,54.29,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L57D I80F R124T S139K",4
"lib1","SARS-CoV-2","TGGATAGTCATAATTA",6,76.69,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25K Y66V P161L Y175R",4
"lib1","SARS-CoV-2","TGGATAGTCTCTCAAT",6,132.72,10.06,-0.7,0.08,2.47,1,0,">1 nonsynonymous","Y39R L60H D98Y Q144N F160H",5
"lib1","SARS-CoV-2","TGGATATAAAACTACG",2,60.97,10.06,-0.71,0.13,2.2,1.1,0.01,">1 nonsynonymous","V37Y A105I",2
"lib1","SARS-CoV-2","TGGATATAAACGGTAT",2,2.61,NA,NA,NA,NA,NA,NA,"stop","T46* I142L P177C",3
"lib1","SARS-CoV-2","TGGATATCACAAACAA",2,6.81,9.82,-0.94,0.11,2.6,1.1,0.01,"1 nonsynonymous","I28A",1
"lib1","SARS-CoV-2","TGGATATCCAAATATA",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S L95S E141A L183P",4
"lib1","SARS-CoV-2","TGGATATCTTTACCTT",2,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66L K94L V103D Y119N L162S Q176E",6
"lib1","SARS-CoV-2","TGGATATGAACCATAT",3,50.58,10.66,-0.1,0.05,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATATGGCGTAAAT",1,26.79,10.79,0.03,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATATGGTGCGCTG",3,103.42,10.76,-0.01,0.06,2.91,1.03,0,"1 nonsynonymous","R78W",1
"lib1","SARS-CoV-2","TGGATATTATACAATT",4,50.76,10.79,0.02,0.07,2.91,1.03,0,"1 nonsynonymous","A81S",1
"lib1","SARS-CoV-2","TGGATATTGAAGTTTA",3,26.03,10.74,-0.02,0.03,2.99,1,0,"1 nonsynonymous","Y35I",1
"lib1","SARS-CoV-2","TGGATCAAAGGTATAG",3,49.8,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","S129T E141L P177E",3
"lib1","SARS-CoV-2","TGGATCAAATATCAGG",2,18.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14W F44S D98Q I142S",4
"lib1","SARS-CoV-2","TGGATCAAATATTCCA",2,2.47,NA,NA,NA,NA,NA,NA,"stop","G83L S129L F156* Q176W P191S T201K",6
"lib1","SARS-CoV-2","TGGATCAAATTCCGAG",3,132.32,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I28K D59I T140G F156H",4
"lib1","SARS-CoV-2","TGGATCAACCACGAAT",8,57.61,10.79,0.02,0.05,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATCAACCAGAATG",2,13.96,10.04,-0.73,0.14,2.66,1.09,0.01,">1 nonsynonymous","T15F S41L",2
"lib1","SARS-CoV-2","TGGATCACACTTAAAA",1,12.78,10.91,0.14,0.09,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATCACTGTTATAG",2,77.87,10.62,-0.14,0.05,2.95,1.02,0,"1 nonsynonymous","G116R",1
"lib1","SARS-CoV-2","TGGATCATGTATAGAA",6,46.12,10.76,0,0.07,2.91,1.04,0,">1 nonsynonymous","S43Y V173I A190V",3
"lib1","SARS-CoV-2","TGGATCATTATTCAGA",2,86.87,9.72,-1.05,0.06,2.78,1.05,0,">1 nonsynonymous","T3L P177A",2
"lib1","SARS-CoV-2","TGGATCCAAATAATCG",2,42.63,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V37S T148G Y159G T170M",4
"lib1","SARS-CoV-2","TGGATCCATGGTCATG",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10P W23Y S139A G146K",4
"lib1","SARS-CoV-2","TGGATCCCCAACCATG",6,123.16,6,-4.76,1.16,1.5,1.16,0.01,">1 nonsynonymous","I2T Y35S L95A N110E S139N N157T",6
"lib1","SARS-CoV-2","TGGATCCCGGACTGTG",4,34.41,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G116M R124F G146L",3
"lib1","SARS-CoV-2","TGGATCCGACATAGGA",3,15.02,6.2,-4.57,0.79,1.5,1.17,0.03,">1 nonsynonymous","S41Q R124V",2
"lib1","SARS-CoV-2","TGGATCCTAGAGGCCG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib1","SARS-CoV-2","TGGATCCTTGGAGAAG",14,54.71,6.71,-4.05,0.46,1.5,1.16,0.03,">1 nonsynonymous","S41N D98S D112S P149I",4
"lib1","SARS-CoV-2","TGGATCGCGACTAAAG",1,74.06,10.29,-0.48,0.06,2.9,1.07,0,"1 nonsynonymous","A145T",1
"lib1","SARS-CoV-2","TGGATCTTTTATCCAT",2,50.73,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","G9S V65W D137R",3
"lib1","SARS-CoV-2","TGGATGAAACAAAACC",9,113.97,10.3,-0.47,0.03,2.83,1.02,0,"1 nonsynonymous","A67T",1
"lib1","SARS-CoV-2","TGGATGACAAGTAGGT",2,38.79,10.75,-0.02,0.06,2.94,1.04,0,">1 nonsynonymous","Q144A S184T",2
"lib1","SARS-CoV-2","TGGATGACACCAAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","R78S S147*",2
"lib1","SARS-CoV-2","TGGATGAGCAGAACTA",4,18.99,8.89,-1.87,0.1,1.84,1.07,0.01,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","TGGATGAGGTACGAAT",4,29.02,10.45,-0.31,0.08,2.85,1.02,0,">1 nonsynonymous","T3S P7L",2
"lib1","SARS-CoV-2","TGGATGCAACAAACAA",11,174.76,10.75,-0.02,0.06,2.92,1.06,0,"1 nonsynonymous","S184H",1
"lib1","SARS-CoV-2","TGGATGCAATCTTAAG",2,66.95,10.63,-0.14,0.03,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATGCATACATCAA",2,127.57,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Q79R Y175K",2
"lib1","SARS-CoV-2","TGGATGCCAGGGAACT",2,72.84,10.61,-0.16,0.04,2.97,1.01,0,"1 nonsynonymous","K56I",1
"lib1","SARS-CoV-2","TGGATGGAAACCACTA",7,143.4,10.78,0.02,0.05,2.94,1.03,0,"1 nonsynonymous","N64A",1
"lib1","SARS-CoV-2","TGGATGGACCATCTAC",4,0.11,NA,NA,NA,NA,NA,NA,"stop","F44L S45K L57* A67L Y159T",5
"lib1","SARS-CoV-2","TGGATGGGTTCATGCT",2,39.25,10.08,-0.68,0.12,2.22,1.01,0.01,">1 nonsynonymous","F12T T100V S129G",3
"lib1","SARS-CoV-2","TGGATGGTTTTTGTCC",3,16.12,10.32,-0.44,0.06,2.95,1,0,">1 nonsynonymous","L5V S29L D59T Q168A",4
"lib1","SARS-CoV-2","TGGATGTTCACCAACA",1,11.23,10.18,-0.58,0.08,2.95,1.02,0,">1 nonsynonymous","I2S N130S G155D",3
"lib1","SARS-CoV-2","TGGATGTTTAGATCTA",5,39.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","D68R E186N",2
"lib1","SARS-CoV-2","TGGATTAAAGAAACCA",5,43.61,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V77K N110L G155C",3
"lib1","SARS-CoV-2","TGGATTAAATAAACTA",12,113.87,8.55,-2.21,0.26,1.5,1.12,0.03,">1 nonsynonymous","N1V G9A W23C",3
"lib1","SARS-CoV-2","TGGATTCAGGAAACTT",3,35.87,10.74,-0.03,0.08,2.87,1.09,0,"1 nonsynonymous","T3L",1
"lib1","SARS-CoV-2","TGGATTCAGGAATATT",1,26.8,10.7,-0.07,0.06,2.86,1.02,0,">1 nonsynonymous","S43I K48S L60M",3
"lib1","SARS-CoV-2","TGGATTCATAAGCCAA",2,26.92,10.25,-0.52,0.09,2.85,1.07,0,">1 nonsynonymous","S29H N64R D90K",3
"lib1","SARS-CoV-2","TGGATTCATCTAGCTT",1,15.3,8.38,-2.38,0.37,1.5,1,0.06,">1 nonsynonymous","A42S A105C V180S",3
"lib1","SARS-CoV-2","TGGATTCCAGTAGAGA",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F S41N S45G T140L",4
"lib1","SARS-CoV-2","TGGATTCCTTATACTG",6,73.68,9.46,-1.3,0.11,1.87,1.07,0.01,">1 nonsynonymous","L5N G51H A105V",3
"lib1","SARS-CoV-2","TGGATTCGGTTCAAAA",5,146.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2C G172W",2
"lib1","SARS-CoV-2","TGGATTCTGAGATGGA",1,30.27,10.7,-0.06,0.08,2.8,1.06,0,"1 nonsynonymous","T100S",1
"lib1","SARS-CoV-2","TGGATTGAATATTCTA",3,40.42,9.64,-1.13,0.22,1.69,1.09,0.02,">1 nonsynonymous","T3G N13C G146A",3
"lib1","SARS-CoV-2","TGGATTGCAATGACCA",1,14.35,9.96,-0.8,0.06,2.91,1.01,0,"1 nonsynonymous","I142S",1
"lib1","SARS-CoV-2","TGGATTGTATTGGGCT",2,0.49,NA,NA,NA,NA,NA,NA,"stop","I88* F99S P161C",3
"lib1","SARS-CoV-2","TGGATTGTGGTTCCGT",5,65.34,10.71,-0.05,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGATTTAATAATTTA",5,13.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F L57S Y143K",3
"lib1","SARS-CoV-2","TGGATTTACAACGTGT",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R I138R",2
"lib1","SARS-CoV-2","TGGATTTAGAAGGTTC",3,38.64,9.67,-1.09,0.12,2.61,1.13,0.01,">1 nonsynonymous","Y35W T55N Y165L",3
"lib1","SARS-CoV-2","TGGATTTATATGCGTG",9,45.46,10.32,-0.44,0.07,2.88,1.03,0,">1 nonsynonymous","N130V G155C",2
"lib1","SARS-CoV-2","TGGATTTCAACTTCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91* R136D T148L",3
"lib1","SARS-CoV-2","TGGATTTCACGGGACA",1,12.03,10.62,-0.14,0.1,2.95,1,0,">1 nonsynonymous","N4L T100L T148S",3
"lib1","SARS-CoV-2","TGGATTTTTAGAGATA",5,27.99,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4T N13Y R179W",3
"lib1","SARS-CoV-2","TGGATTTTTTACAACA",2,7.36,7,-3.76,0.43,2.25,1.26,0.02,">1 nonsynonymous","A105N G152R",2
"lib1","SARS-CoV-2","TGGCAAAAAGAGGGTG",2,91,10.29,-0.47,0.03,2.94,1.04,0,">1 nonsynonymous","F160S G174K",2
"lib1","SARS-CoV-2","TGGCAAAAAGGGAGAA",6,74.82,7.53,-3.24,0.32,1.5,1.17,0.03,">1 nonsynonymous","N64D G83K W106Q N151I",4
"lib1","SARS-CoV-2","TGGCAAAAAGTATTTC",1,16.36,10.75,-0.02,0.07,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCAAAACAACATAG",2,11.99,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","I28R I104T N118G R179W C195Y",5
"lib1","SARS-CoV-2","TGGCAAAACCTTCAAA",6,65.68,10.76,0,0.05,2.87,1.08,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","TGGCAAAAGCGACACA",3,29.68,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","G101C T148S Y165T",3
"lib1","SARS-CoV-2","TGGCAAAAGTGGCAAT",2,15.17,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","C6G F12M S45M N107M",4
"lib1","SARS-CoV-2","TGGCAAAATACTATAA",5,48.14,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37F V77T C102L C150G",4
"lib1","SARS-CoV-2","TGGCAAACACAATACT",4,143.81,10.45,-0.31,0.05,2.88,1.01,0,"1 nonsynonymous","Q176N",1
"lib1","SARS-CoV-2","TGGCAAACACGCTTTT",4,7.84,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","L5R N30K C102R E141L P149H Y175A",6
"lib1","SARS-CoV-2","TGGCAAACCATGCTGA",7,143.22,10.65,-0.12,0.05,2.93,1.04,0,"1 nonsynonymous","P54N",1
"lib1","SARS-CoV-2","TGGCAAACCCTTCTAA",2,85.97,10.68,-0.08,0.07,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCAAACGGCCAACA",4,21.1,8.51,-2.25,0.28,1.5,1.12,0.05,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","TGGCAAAGGAAAAATA",1,6.73,10.42,-0.35,0.26,1.94,1,0.03,">1 nonsynonymous","A105N V153S",2
"lib1","SARS-CoV-2","TGGCAAAGTACCTAGA",1,13.95,6,-4.76,2,3,1.13,0,">1 nonsynonymous","N92C D112A",2
"lib1","SARS-CoV-2","TGGCAAATAACTGCTA",4,22.57,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60A P82Q T140K G152M",4
"lib1","SARS-CoV-2","TGGCAAATGATATGCA",21,222.08,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N64M E76Y K87S Y178Q",4
"lib1","SARS-CoV-2","TGGCAAATGGGGCTCC",3,33.99,9.86,-0.9,0.16,2.13,1.04,0.01,">1 nonsynonymous","P7L T100W N110M T201H",4
"lib1","SARS-CoV-2","TGGCAACGATTCGTGT",2,25.93,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N58F V182G",2
"lib1","SARS-CoV-2","TGGCAACGTAGCAAGC",3,10.67,9.32,-1.45,0.42,1.5,1,0.07,">1 nonsynonymous","P54S Q84W E141L P169L",4
"lib1","SARS-CoV-2","TGGCAACTATCGCCTA",6,1.62,NA,NA,NA,NA,NA,NA,"stop","A18* V37L G86Y L95I T100M Y121* G174N",7
"lib1","SARS-CoV-2","TGGCAACTTAGTTGTT",3,39.34,10.55,-0.22,0.03,2.93,1.04,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","TGGCAAGAGATAGTTT",2,21.71,8.4,-2.37,0.19,1.59,1.14,0.03,">1 nonsynonymous","K26F L162Y",2
"lib1","SARS-CoV-2","TGGCAAGCCGTGGCAC",2,0.87,NA,NA,NA,NA,NA,NA,"stop","I2V S41M T55S N64T F156*",5
"lib1","SARS-CoV-2","TGGCAATATAACCACA",1,29.15,10.89,0.13,0.08,2.91,1.04,0,"1 nonsynonymous","Q163K",1
"lib1","SARS-CoV-2","TGGCAATCCTAAAACG",1,47.14,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y39T D59S D90K L95P",4
"lib1","SARS-CoV-2","TGGCAATCTCTTTATT",3,20.33,6,-4.76,2,3,1.09,0,">1 nonsynonymous","L5I G9D F17S G83F V103W N157L",6
"lib1","SARS-CoV-2","TGGCAATTGAAATATA",1,12.92,8.4,-2.36,0.17,2.49,1.09,0.01,">1 nonsynonymous","N107K Y119P P149L L188G",4
"lib1","SARS-CoV-2","TGGCAATTTATCCACC",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F A14M",2
"lib1","SARS-CoV-2","TGGCACAGAAAAAGTA",8,41.52,8.92,-1.84,0.14,1.62,1.15,0.01,">1 nonsynonymous","L131S T148S",2
"lib1","SARS-CoV-2","TGGCACAGAATACGAG",5,49.42,10.75,-0.02,0.09,2.9,1.08,0,"1 nonsynonymous","V32R",1
"lib1","SARS-CoV-2","TGGCACAGAGATCAAA",8,87.37,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V32I Y159V F167L S184A",4
"lib1","SARS-CoV-2","TGGCACATTTGATTAG",1,71.6,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","G9A G166W P177L",3
"lib1","SARS-CoV-2","TGGCACCACAAAGTAA",2,49.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P G101S P133S",3
"lib1","SARS-CoV-2","TGGCACGCCCTAAGCT",8,1.9,NA,NA,NA,NA,NA,NA,"stop","C6V F99E N130K D137*",4
"lib1","SARS-CoV-2","TGGCACGGATTTCAAA",9,181.69,10.43,-0.34,0.04,2.9,1.03,0,">1 nonsynonymous","S41A A67C",2
"lib1","SARS-CoV-2","TGGCACTAAATTCTTT",1,24.39,10.63,-0.14,0.11,2.82,1.1,0,"1 nonsynonymous","G146A",1
"lib1","SARS-CoV-2","TGGCACTATAGAGAGG",6,59.89,10.18,-0.59,0.06,2.94,1,0,">1 nonsynonymous","R78F E141F",2
"lib1","SARS-CoV-2","TGGCACTGCTAATAAA",2,54.46,10.19,-0.57,0.07,2.39,1.03,0,">1 nonsynonymous","N110K R136E",2
"lib1","SARS-CoV-2","TGGCAGAAATCTACCG",3,20.13,7.5,-3.26,0.45,1.5,1.02,0.06,">1 nonsynonymous","F12R D34V G116Y V173D P191S",5
"lib1","SARS-CoV-2","TGGCAGAATCATATGC",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F N24F S41L S139R S200M",5
"lib1","SARS-CoV-2","TGGCAGACGTGAGAAC",2,72.82,10.68,-0.09,0.06,2.9,1.06,0,"1 nonsynonymous","T148I",1
"lib1","SARS-CoV-2","TGGCAGAGATAGTTGG",3,31.22,10.66,-0.1,0.05,2.9,1.03,0,"1 nonsynonymous","S184F",1
"lib1","SARS-CoV-2","TGGCAGATGGTCGCTG",9,3.87,NA,NA,NA,NA,NA,NA,"stop","G9H Y39V P133R F167*",4
"lib1","SARS-CoV-2","TGGCAGCACGCCCCGA",13,1.68,NA,NA,NA,NA,NA,NA,"stop","S36* N151* E186*",3
"lib1","SARS-CoV-2","TGGCAGCACTTCAGAA",2,113.09,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","N58L L95P",2
"lib1","SARS-CoV-2","TGGCAGCAGGCACATA",5,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K E141L",2
"lib1","SARS-CoV-2","TGGCAGGAATTTAAAA",11,96.6,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y35M S45P S53P D98S A105L N110S",6
"lib1","SARS-CoV-2","TGGCAGGTTCTTAGTA",2,19.94,6.77,-4,0.36,1.5,1.07,0.02,">1 nonsynonymous","S45R V180Y",2
"lib1","SARS-CoV-2","TGGCAGTACCGCCTGC",2,5.99,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","T3K G9T T46P L60A A67S Y91L P191E",7
"lib1","SARS-CoV-2","TGGCAGTCATTCCAAA",2,67.98,10.7,-0.06,0.09,2.9,1.1,0,"1 nonsynonymous","S129T",1
"lib1","SARS-CoV-2","TGGCATAAACTTTAAA",1,20.1,6,-4.76,1.56,3,1.13,0,">1 nonsynonymous","V37L R124Q Y143C",3
"lib1","SARS-CoV-2","TGGCATAAGCCTACTA",5,109.32,10.41,-0.36,0.05,2.92,1.01,0,">1 nonsynonymous","V37C L95V L122W",3
"lib1","SARS-CoV-2","TGGCATATCTATAATT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35T D90* N120P N130L Y175I",5
"lib1","SARS-CoV-2","TGGCATATGTTCCTCT",1,29.19,9.02,-1.75,0.14,2.74,1.17,0.01,">1 nonsynonymous","V32E S41C Y159F",3
"lib1","SARS-CoV-2","TGGCATATTTATAGGA",5,115.92,10.64,-0.12,0.06,2.91,1.04,0,"1 nonsynonymous","K132C",1
"lib1","SARS-CoV-2","TGGCATCACAAACAAG",1,33.11,10.84,0.07,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCATCTACCGAGAT",1,43.22,9.91,-0.86,0.07,2.72,1.09,0,">1 nonsynonymous","Y39H N171E",2
"lib1","SARS-CoV-2","TGGCATCTACTCGACG",4,12.96,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","R16K D98T R127F S164T E186C",5
"lib1","SARS-CoV-2","TGGCATCTCTCGATAA",3,78.82,9.9,-0.86,0.06,2.77,1.08,0,">1 nonsynonymous","L5N A89S E154L",3
"lib1","SARS-CoV-2","TGGCATGGATACTGAG",1,7.98,6.02,-4.75,0.23,3,1.08,0,">1 nonsynonymous","F44A W106F Y121V",3
"lib1","SARS-CoV-2","TGGCATTAAAGCAAGC",4,67.75,10.55,-0.21,0.05,2.96,1.01,0,">1 nonsynonymous","V37F F47N N64D",3
"lib1","SARS-CoV-2","TGGCATTAACATTTCT",5,1.58,NA,NA,NA,NA,NA,NA,"stop","Y50* G86D T100E W106E",4
"lib1","SARS-CoV-2","TGGCATTAACGATTAG",2,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S C61P D90L T100E T201H",5
"lib1","SARS-CoV-2","TGGCATTAAGATCCTA",1,20.59,9.24,-1.52,0.07,2.75,1.14,0,"1 nonsynonymous","Y119C",1
"lib1","SARS-CoV-2","TGGCATTACAGAGCAC",16,359.2,9,-1.76,0.08,2.42,1.13,0,">1 nonsynonymous","N4S A105Y Y119R",3
"lib1","SARS-CoV-2","TGGCATTCGGTGATAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S V37N C49V T100L C102R",5
"lib1","SARS-CoV-2","TGGCATTGACTCTCCC",2,1.74,NA,NA,NA,NA,NA,NA,"stop","K26T G166C S184*",3
"lib1","SARS-CoV-2","TGGCATTTAGAAAATA",3,64.31,6.86,-3.9,0.23,1.5,1.11,0.01,">1 nonsynonymous","S45C A145N L188F",3
"lib1","SARS-CoV-2","TGGCATTTCATCCATA",5,73.17,10.83,0.07,0.06,2.88,1.07,0,"1 nonsynonymous","T55H",1
"lib1","SARS-CoV-2","TGGCCAAACTCTGCAT",2,45.56,10.55,-0.22,0.08,2.86,1,0,">1 nonsynonymous","T63F N171H",2
"lib1","SARS-CoV-2","TGGCCAAAGACAAGGA",11,21.63,7.82,-2.95,0.28,1.5,1.22,0.03,">1 nonsynonymous","N13G G116W E135I",3
"lib1","SARS-CoV-2","TGGCCAAAGTTGGACC",3,28.37,8.89,-1.88,0.2,1.64,1.25,0.01,">1 nonsynonymous","K94A Y123I",2
"lib1","SARS-CoV-2","TGGCCAATAACTCGGT",3,46.04,9.92,-0.84,0.09,2.19,1.06,0,"1 nonsynonymous","K94Y",1
"lib1","SARS-CoV-2","TGGCCAATGTTTTCCC",2,37.84,6.99,-3.77,0.32,1.5,1.07,0.05,">1 nonsynonymous","I28E F99H",2
"lib1","SARS-CoV-2","TGGCCAATTGCAAGTA",1,22.41,9.92,-0.84,0.18,1.95,1.07,0.02,">1 nonsynonymous","R27K L162Q",2
"lib1","SARS-CoV-2","TGGCCACAGATAATAC",6,55.8,6,-4.76,0.91,3,1.18,0.01,">1 nonsynonymous","Y93L F167M",2
"lib1","SARS-CoV-2","TGGCCACCAATGACAC",1,44.03,10.66,-0.1,0.05,2.9,1.04,0,"1 nonsynonymous","G83L",1
"lib1","SARS-CoV-2","TGGCCACCGAATACAT",2,0.62,NA,NA,NA,NA,NA,NA,"stop","Y93T Y121S F167*",3
"lib1","SARS-CoV-2","TGGCCACGAATGTAGT",2,5.94,NA,NA,NA,NA,NA,NA,"stop","G9* A42K",2
"lib1","SARS-CoV-2","TGGCCAGAAGTGGGAA",3,54.25,7.24,-3.52,0.29,1.5,1.2,0.02,">1 nonsynonymous","Q84W N120A T170V",3
"lib1","SARS-CoV-2","TGGCCAGATAAAGTAA",5,26.79,7.15,-3.62,0.21,1.5,1.15,0.01,">1 nonsynonymous","N40G R136L G146W",3
"lib1","SARS-CoV-2","TGGCCATTATCAATGA",2,13.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y39Q T85P C150I T170S T201E",5
"lib1","SARS-CoV-2","TGGCCATTTAAGCGTT",12,160.49,7.67,-3.1,0.1,1.65,1.11,0,">1 nonsynonymous","T55C G146H P161S",3
"lib1","SARS-CoV-2","TGGCCCAAAGCATTTA",5,49.71,9.01,-1.76,0.06,1.96,1.09,0,">1 nonsynonymous","Q84W G174R",2
"lib1","SARS-CoV-2","TGGCCCACAAACGTAA",1,23.87,10.78,0.02,0.05,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCCCACGTCTGACA",2,58.18,10.3,-0.47,0.04,2.87,1.04,0,">1 nonsynonymous","A33Y W106F",2
"lib1","SARS-CoV-2","TGGCCCACTCATTTTG",1,19.87,10.24,-0.53,0.08,2.91,1,0,">1 nonsynonymous","N107S A192D",2
"lib1","SARS-CoV-2","TGGCCCATCTCGGTTC",2,18.52,6,-4.76,2,1.5,1.18,0.05,"1 nonsynonymous","I72F",1
"lib1","SARS-CoV-2","TGGCCCCAGTTTAACT",10,1.83,NA,NA,NA,NA,NA,NA,"stop","F8* R78E Q84L P96T S113D D137T N151R",7
"lib1","SARS-CoV-2","TGGCCCCTAGTGAAGT",2,13.92,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","N4G I80C Y93P K128R L162K G196S",6
"lib1","SARS-CoV-2","TGGCCCCTTTATCAAA",1,11.27,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S36K D68K G101M N130T Y165V T201P",6
"lib1","SARS-CoV-2","TGGCCCTATCCAGAGC",5,58.78,10.4,-0.36,0.05,2.91,1.05,0,">1 nonsynonymous","G116E E154N L187N",3
"lib1","SARS-CoV-2","TGGCCCTCAAGGGTAC",5,46.57,9.8,-0.96,0.04,2.88,1.09,0,">1 nonsynonymous","T170Y P197Q",2
"lib1","SARS-CoV-2","TGGCCCTCGGCAACCG",1,6.5,6.62,-4.14,2,1.5,1.05,0,">1 nonsynonymous","A14K C49E I104S",3
"lib1","SARS-CoV-2","TGGCCCTTCCGAGTCC",10,219.99,10.8,0.03,0.05,2.91,1.05,0,">1 nonsynonymous","P7D A190R",2
"lib1","SARS-CoV-2","TGGCCGAAAAAGGCCG",2,26.34,10.82,0.05,0.08,2.95,1,0,"1 nonsynonymous","K132H",1
"lib1","SARS-CoV-2","TGGCCGACCGTTCACA",2,95.04,6.1,-4.67,0.78,1.5,1.23,0.02,">1 nonsynonymous","T85M G172R",2
"lib1","SARS-CoV-2","TGGCCGGCAGACGTTG",5,19.11,6.22,-4.55,0.99,1.5,1.07,0.05,">1 nonsynonymous","P54I G83T K114L Q168A P177M",5
"lib1","SARS-CoV-2","TGGCCGTGCTAACAGG",5,119.98,9.69,-1.08,0.14,2.12,1.05,0.01,">1 nonsynonymous","V11K P191N",2
"lib1","SARS-CoV-2","TGGCCTAAGAATACAG",4,61.17,9.45,-1.32,0.08,2.77,1.14,0,">1 nonsynonymous","N120Y T170H",2
"lib1","SARS-CoV-2","TGGCCTAGACTCCGTG",10,79.97,6.29,-4.48,0.33,1.5,1.12,0.01,">1 nonsynonymous","T85W Y93D R124I",3
"lib1","SARS-CoV-2","TGGCCTAGAGGCTTCT",3,21.55,10.66,-0.1,0.05,2.96,1,0,">1 nonsynonymous","V11I T140G",2
"lib1","SARS-CoV-2","TGGCCTAGGAGCGCGT",9,137.37,10.5,-0.26,0.04,2.91,1.03,0,"1 nonsynonymous","K87W",1
"lib1","SARS-CoV-2","TGGCCTATACAGACAA",3,10.39,8.3,-2.46,0.42,2.07,1.16,0.07,">1 nonsynonymous","D34S A105P",2
"lib1","SARS-CoV-2","TGGCCTATTACAGCGA",4,70.77,10.25,-0.51,0.07,2.69,1,0,">1 nonsynonymous","D34E Y66L T201Y",3
"lib1","SARS-CoV-2","TGGCCTGAGGATACTG",2,18.54,10.76,0,0.1,2.85,1.03,0,">1 nonsynonymous","S36G S45N",2
"lib1","SARS-CoV-2","TGGCCTTAACCAAGTC",1,62.2,10.8,0.04,0.06,2.87,1.07,0,">1 nonsynonymous","V37S T148Y",2
"lib1","SARS-CoV-2","TGGCCTTTACTGGGAA",1,1.25,NA,NA,NA,NA,NA,NA,"stop","G9* I28F C49V R124D",4
"lib1","SARS-CoV-2","TGGCCTTTGGCGCACG",14,138.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8A G83P W106R Y178F",4
"lib1","SARS-CoV-2","TGGCGAACACGCAATT",5,50.09,10.73,-0.03,0.08,2.91,1.06,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","TGGCGACTCCTACACT",6,128.73,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83I A89N W106L P149L Q176T",5
"lib1","SARS-CoV-2","TGGCGACTGTTAATGT",3,59.87,10.78,0.02,0.05,2.96,1.01,0,"1 nonsynonymous","K48L",1
"lib1","SARS-CoV-2","TGGCGAGAACGCCCAG",1,29.63,6.21,-4.55,0.65,1.5,1.15,0.02,">1 nonsynonymous","I28M Y35G G74D A105S N118F",5
"lib1","SARS-CoV-2","TGGCGAGATAAAACTA",1,5.07,9.04,-1.73,0.42,1.5,1.06,0.06,">1 nonsynonymous","V37L T55F F62D D98F",4
"lib1","SARS-CoV-2","TGGCGAGCCGCAATAA",2,1.21,NA,NA,NA,NA,NA,NA,"stop","R16* A33R F44M",3
"lib1","SARS-CoV-2","TGGCGATCAATAAGAG",3,10.79,8.16,-2.61,0.27,1.5,1.17,0.03,">1 nonsynonymous","P96M T170M",2
"lib1","SARS-CoV-2","TGGCGATGGCATATCA",2,35.03,10.43,-0.34,0.08,2.84,1.05,0,">1 nonsynonymous","N4P P133G",2
"lib1","SARS-CoV-2","TGGCGATTCAGACAGC",3,23.68,6.23,-4.53,0.71,1.5,1.1,0.03,">1 nonsynonymous","A67H G83N C102F N130S F167A",5
"lib1","SARS-CoV-2","TGGCGCAAAGCCTGAC",4,0.51,NA,NA,NA,NA,NA,NA,"stop","I88K I142S S200*",3
"lib1","SARS-CoV-2","TGGCGCAACCAATCAA",6,61.52,6,-4.76,2,3,1.16,0,">1 nonsynonymous","R16P I72Y P82W C150D",4
"lib1","SARS-CoV-2","TGGCGCAGTATCCTAA",6,110.14,10.55,-0.22,0.09,2.81,1.01,0,">1 nonsynonymous","F62P G116R",2
"lib1","SARS-CoV-2","TGGCGCCAATAGAATA",1,60.44,10.79,0.03,0.05,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCGCGGATCATTAT",2,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70I Q84T Y165H",3
"lib1","SARS-CoV-2","TGGCGCGTCTCTATCA",9,0.16,NA,NA,NA,NA,NA,NA,"stop","T15* C49Y G74S G86Y P169Y",5
"lib1","SARS-CoV-2","TGGCGCGTCTTTACTG",7,76.58,8.57,-2.2,0.09,2.75,1.07,0,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","TGGCGCTAAAATAACA",6,50.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68L P133S",2
"lib1","SARS-CoV-2","TGGCGGAACTGCGAGT",4,57.16,9.91,-0.85,0.1,2.28,1.05,0,"1 nonsynonymous","G51I",1
"lib1","SARS-CoV-2","TGGCGGACCTCCAGAA",4,19.55,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","G9Q T15V L60G R73V G86A S113N P169I",7
"lib1","SARS-CoV-2","TGGCGGACTTAGCTTT",11,35.18,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","C6D G86T A105C",3
"lib1","SARS-CoV-2","TGGCGGAGCCGGGGCA",1,41.24,10.4,-0.37,0.05,2.87,1.04,0,">1 nonsynonymous","Y39L N58R T85Y",3
"lib1","SARS-CoV-2","TGGCGGAGTCATAAGT",4,36.9,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D90S V103R T140R",3
"lib1","SARS-CoV-2","TGGCGGATAATCAACA",2,37.37,6.68,-4.09,0.32,1.5,1.08,0.02,">1 nonsynonymous","G83E R136N Y165M",3
"lib1","SARS-CoV-2","TGGCGGGGCGAACCTA",1,3.33,NA,NA,NA,NA,NA,NA,"stop","D68W K87E D97S S139*",4
"lib1","SARS-CoV-2","TGGCGTATAATTAAAT",3,153.09,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A89N S108E Y143Q F160C",4
"lib1","SARS-CoV-2","TGGCGTGCGCAAGCAC",3,9.07,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","A33V T63C D90H S113C N118L",5
"lib1","SARS-CoV-2","TGGCGTGGACTCATGT",2,24.03,8.51,-2.26,0.2,1.76,1.16,0.01,">1 nonsynonymous","V11N D90S",2
"lib1","SARS-CoV-2","TGGCGTTAAACTATTG",2,17.07,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","V37P C158P",2
"lib1","SARS-CoV-2","TGGCGTTATTAAACTT",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82V D90L F134K",3
"lib1","SARS-CoV-2","TGGCTAAAAATATAAT",1,24.69,10.2,-0.56,0.09,2.68,1.06,0,"1 nonsynonymous","A33D",1
"lib1","SARS-CoV-2","TGGCTAACACCTACGC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","K87* I138F",2
"lib1","SARS-CoV-2","TGGCTAACAGAATATG",7,88.72,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I88D N118D",2
"lib1","SARS-CoV-2","TGGCTAAGAAGATAGC",4,63.75,6.78,-3.99,0.31,1.5,1.16,0.01,"1 nonsynonymous","L131E",1
"lib1","SARS-CoV-2","TGGCTAAGCAACCCAT",2,12.31,6.47,-4.3,0.51,1.5,1.25,0.02,">1 nonsynonymous","F12L I28E T100L P169N",4
"lib1","SARS-CoV-2","TGGCTAATACCAAACT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","K56I I72L K114Y E154R Y159*",5
"lib1","SARS-CoV-2","TGGCTAATGAGAAGAT",1,26.83,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","V11T P161V",2
"lib1","SARS-CoV-2","TGGCTAATTCTACCAG",2,41.78,10.85,0.09,0.07,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCTAATTTCTAAAG",4,114.26,9.66,-1.1,0.1,1.83,1.09,0,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TGGCTACAATGCAACC",2,114.81,6.36,-4.4,0.42,1.5,1.15,0.01,">1 nonsynonymous","Y119A R136T T170E",3
"lib1","SARS-CoV-2","TGGCTACCAATCGTCT",12,135.69,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y35D Q84L Y143D F160Y",4
"lib1","SARS-CoV-2","TGGCTACGCGAACTCC",8,42.7,10.77,0.01,0.06,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCTACTGCGGTGAT",4,241.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F8M Y121P G172A",3
"lib1","SARS-CoV-2","TGGCTAGTCACATACG",2,18.94,7.13,-3.63,0.41,1.5,1.14,0.03,"1 nonsynonymous","R179I",1
"lib1","SARS-CoV-2","TGGCTATATACGCGAC",5,76.01,10.23,-0.54,0.07,2.9,1.03,0,">1 nonsynonymous","C61S G152C",2
"lib1","SARS-CoV-2","TGGCTATGGATCATAT",2,77.19,10.16,-0.61,0.08,2.57,1.03,0,">1 nonsynonymous","D34H T140S",2
"lib1","SARS-CoV-2","TGGCTATTAAAAACAA",5,12.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L5A S41F C49I F99M P177R",5
"lib1","SARS-CoV-2","TGGCTATTAGAAAGGC",8,35.78,6,-4.76,2,3,1.1,0,">1 nonsynonymous","Y35S S45G P82D A145V",4
"lib1","SARS-CoV-2","TGGCTCAATTAGATGA",5,98.12,9.05,-1.71,0.08,2.64,1.11,0,">1 nonsynonymous","W106L L125Q",2
"lib1","SARS-CoV-2","TGGCTCGATAGCACAC",4,51.27,10.86,0.09,0.08,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGCTGACTGCCTATA",1,1.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","TGGCTGAGAAACAAGG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","F99H I104S Y123* F160C T201N",5
"lib1","SARS-CoV-2","TGGCTGCGTACCTCCA",4,94.41,9.99,-0.78,0.06,2.75,1.03,0,"1 nonsynonymous","V173P",1
"lib1","SARS-CoV-2","TGGCTGGCCTACATCA",4,8.18,NA,NA,NA,NA,NA,NA,"stop","W23* Q84M D98A",3
"lib1","SARS-CoV-2","TGGCTGTCCAACAGTA",2,57.28,8.82,-1.94,0.17,1.9,1.12,0.01,">1 nonsynonymous","Y121T S139N",2
"lib1","SARS-CoV-2","TGGCTGTGAAACCCAC",13,130.24,10.75,-0.01,0.06,2.92,1.06,0,"1 nonsynonymous","V52F",1
"lib1","SARS-CoV-2","TGGCTTAATAAAGTCC",6,33.53,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","C6A N120V D137I",3
"lib1","SARS-CoV-2","TGGCTTAATGAAAAAA",4,26.57,6,-4.76,2,3,1.1,0,"1 nonsynonymous","I72P",1
"lib1","SARS-CoV-2","TGGCTTAATTAAGGCG",8,91.76,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","I28S Y93T D98A N120H",4
"lib1","SARS-CoV-2","TGGCTTACAAATCCTA",2,0.97,NA,NA,NA,NA,NA,NA,"stop","N4C R25* K87V S113T G152S A192M",6
"lib1","SARS-CoV-2","TGGCTTACGAAACTGA",3,15.16,10.55,-0.22,0.09,2.98,1,0,">1 nonsynonymous","G116L S129T",2
"lib1","SARS-CoV-2","TGGCTTAGGAAGGGTG",6,1.32,NA,NA,NA,NA,NA,NA,"stop","I2* E10N R73Y P177T",4
"lib1","SARS-CoV-2","TGGCTTAGGTACAAGG",5,84.14,6.6,-4.17,0.39,1.5,1.13,0.02,">1 nonsynonymous","N107W D137L G152K",3
"lib1","SARS-CoV-2","TGGCTTATCGAACTAT",1,30.54,10.41,-0.35,0.08,2.92,1,0,">1 nonsynonymous","L111Q I138W",2
"lib1","SARS-CoV-2","TGGCTTCAGTCTTCTA",5,109.09,10.73,-0.03,0.03,2.97,1.01,0,">1 nonsynonymous","S43H G155A",2
"lib1","SARS-CoV-2","TGGCTTCTGTTACCAG",5,0.84,NA,NA,NA,NA,NA,NA,"stop","I28* N110Y P149F",3
"lib1","SARS-CoV-2","TGGCTTGCAGAACACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M C150S",2
"lib1","SARS-CoV-2","TGGCTTGGATCACCTT",1,26.99,10.8,0.04,0.1,2.77,1.16,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","TGGCTTGGCTTACTCT",1,26.4,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","D97R Q144I C158L T170V",4
"lib1","SARS-CoV-2","TGGCTTGTAACTATCT",2,24.53,6,-4.76,2,3,1.1,0,">1 nonsynonymous","T3R S53F Y143R",3
"lib1","SARS-CoV-2","TGGCTTGTACAGTGGT",2,18.03,9.01,-1.75,0.09,2.67,1.12,0,">1 nonsynonymous","F44N C61K L162M",3
"lib1","SARS-CoV-2","TGGCTTTAAAAAATTA",2,53.79,10.73,-0.03,0.05,2.88,1.06,0,"1 nonsynonymous","A89S",1
"lib1","SARS-CoV-2","TGGGAAAAAGTCAGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","D59Y W106L N130V G196*",4
"lib1","SARS-CoV-2","TGGGAAAAGCGAAACC",5,106.54,10.2,-0.57,0.06,2.95,1,0,"1 nonsynonymous","V11F",1
"lib1","SARS-CoV-2","TGGGAAAATGCAGTTA",9,45.15,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N92S F156R L162P",3
"lib1","SARS-CoV-2","TGGGAAACCATACTAC",3,33.84,6.62,-4.14,0.25,1.81,1.17,0.01,">1 nonsynonymous","N92S T140G T148G",3
"lib1","SARS-CoV-2","TGGGAAAGCATACGAA",3,115.38,9.96,-0.81,0.11,2.16,1.06,0.01,"1 nonsynonymous","L38H",1
"lib1","SARS-CoV-2","TGGGAAAGGTATTCAA",5,51.18,10.72,-0.05,0.09,2.9,1.09,0,">1 nonsynonymous","N24A P54V",2
"lib1","SARS-CoV-2","TGGGAAATATAAAGGA",12,115.14,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S29F I80E",2
"lib1","SARS-CoV-2","TGGGAAATATTATTAT",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T S36V F44C N64A T85M A89Y Y119A S139Q",8
"lib1","SARS-CoV-2","TGGGAAATGGATATTA",6,120.97,10.72,-0.05,0.05,2.93,1.01,0,">1 nonsynonymous","A42L S53T",2
"lib1","SARS-CoV-2","TGGGAAATTAAATTTG",1,30.08,10.18,-0.58,0.09,2.82,1,0,">1 nonsynonymous","N4S F62S K128D E154N",4
"lib1","SARS-CoV-2","TGGGAACAATTATGCC",6,0.46,NA,NA,NA,NA,NA,NA,"stop","S36* N58V G83C C102V N120F K198A",6
"lib1","SARS-CoV-2","TGGGAACATTTATGCG",3,18.14,6,-4.76,2,1.5,1.17,0.06,"1 nonsynonymous","F167Q",1
"lib1","SARS-CoV-2","TGGGAACTATCCCGTT",8,47.97,10.44,-0.32,0.07,2.88,1.05,0,"1 nonsynonymous","D98F",1
"lib1","SARS-CoV-2","TGGGAACTTATATACA",9,190.28,10.73,-0.03,0.04,2.91,1.05,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TGGGAAGGCCATAGAA",13,38.32,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","L5K K56E T100E W106A G174Y",5
"lib1","SARS-CoV-2","TGGGAAGTAACCTCTA",5,70.17,6,-4.76,1.56,3,1.22,0.01,">1 nonsynonymous","A89Y F99T",2
"lib1","SARS-CoV-2","TGGGAAGTTATTTAAA",8,55.2,10.61,-0.16,0.06,2.91,1,0,">1 nonsynonymous","N40R N64C R136K",3
"lib1","SARS-CoV-2","TGGGAATAAATAGTGT",4,52.4,10.65,-0.11,0.06,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGGAATAAGAACAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* K56F V77N",3
"lib1","SARS-CoV-2","TGGGAATACACAAAAG",5,66.63,10.6,-0.16,0.05,2.95,1,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","TGGGAATACCTTATCT",1,73.54,10.61,-0.15,0.07,2.85,1.14,0,">1 nonsynonymous","I28L Q84T",2
"lib1","SARS-CoV-2","TGGGAATATAAAATAA",10,13.48,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","T15V D90Y K128L N157Y V181H",5
"lib1","SARS-CoV-2","TGGGAATATTACATCC",2,12.54,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y35R K94W V103E",3
"lib1","SARS-CoV-2","TGGGAATCAAGCCCAT",1,29.5,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","V37L L60M G101M G117T T148D G166R",6
"lib1","SARS-CoV-2","TGGGAATTGCAATCTT",8,71.11,9.57,-1.2,0.11,2.06,1.06,0.01,">1 nonsynonymous","G86S Q168S",2
"lib1","SARS-CoV-2","TGGGACAAAGTCACAC",11,328.29,8.42,-2.34,0.1,2.42,1.08,0,">1 nonsynonymous","T15L S45G Y175N",3
"lib1","SARS-CoV-2","TGGGACAAATACATAA",2,96.91,10.73,-0.04,0.05,2.89,1.03,0,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","TGGGACAAATGTTAAA",1,30.1,6.01,-4.75,0.47,1.67,1.16,0.01,">1 nonsynonymous","R25C P96R N171H",3
"lib1","SARS-CoV-2","TGGGACACTGGTGAAA",1,18.42,9.78,-0.98,0.13,2.16,1.04,0,">1 nonsynonymous","D90T N120S T140L G152S T201R",5
"lib1","SARS-CoV-2","TGGGACAGTGACAATT",5,178.41,8.38,-2.38,0.12,2.19,1.07,0.01,"1 nonsynonymous","G146L",1
"lib1","SARS-CoV-2","TGGGACATAGGAATCC",1,24.86,10.83,0.06,0.1,2.96,1.04,0,"1 nonsynonymous","V153F",1
"lib1","SARS-CoV-2","TGGGACCAATTGACTG",1,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98G",1
"lib1","SARS-CoV-2","TGGGACCACAAGAACT",6,77.07,8.65,-2.12,0.13,2.5,1.07,0.01,">1 nonsynonymous","Y119S P133K",2
"lib1","SARS-CoV-2","TGGGACCTATTTTAAA",3,13.79,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","D68G F167G",2
"lib1","SARS-CoV-2","TGGGACCTCACCCGTA",7,95.71,10.78,0.02,0.05,2.95,1.02,0,">1 nonsynonymous","S29T N40H",2
"lib1","SARS-CoV-2","TGGGACCTGATATGCA",6,60.87,10.83,0.06,0.07,2.88,1.07,0,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","TGGGACGCAAAGTTAG",13,118.06,10.78,0.02,0.08,2.91,1.08,0,">1 nonsynonymous","N1S D97N",2
"lib1","SARS-CoV-2","TGGGACGTAGATATGT",1,41.15,6,-4.76,1.39,1.5,1.1,0.01,">1 nonsynonymous","S43G C61E R127C",3
"lib1","SARS-CoV-2","TGGGACGTCACCGCAA",3,27.58,6,-4.76,1.08,3,1.2,0.01,">1 nonsynonymous","I28G V32L D137Y Y178I",4
"lib1","SARS-CoV-2","TGGGAGAAGCGATTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C P133T T140L F160D",4
"lib1","SARS-CoV-2","TGGGAGAAGTCCATGT",4,27.76,6.13,-4.63,1.21,1.5,1.4,0.03,">1 nonsynonymous","T85R K94R G101T C195S",4
"lib1","SARS-CoV-2","TGGGAGACTTAAACGT",5,39.75,8.7,-2.06,0.32,1.5,1.05,0.04,"1 nonsynonymous","R179V",1
"lib1","SARS-CoV-2","TGGGAGAGCCACACTA",5,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66K G83L K114Y Y165L",4
"lib1","SARS-CoV-2","TGGGAGATAATTTTAC",2,6.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89S N109L R124D Q144N",4
"lib1","SARS-CoV-2","TGGGAGCATCAGCCTT",3,19.29,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F12I G83P K128L S164G V182A",5
"lib1","SARS-CoV-2","TGGGAGGAACCGAAAT",6,37.12,8.78,-1.98,0.4,1.5,1,0.08,">1 nonsynonymous","C49E C61E S129I",3
"lib1","SARS-CoV-2","TGGGAGGCATGACCTG",6,1.39,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib1","SARS-CoV-2","TGGGAGTCACACATTA",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V S41C D68Q K128H Y175F",5
"lib1","SARS-CoV-2","TGGGAGTTGTGTAAAA",3,27.97,8.54,-2.23,0.15,2.88,1.07,0.01,">1 nonsynonymous","P169E Y175H",2
"lib1","SARS-CoV-2","TGGGATAAACCATAGT",9,43.82,7.3,-3.46,0.41,1.5,1.01,0.07,">1 nonsynonymous","F12V I28W K48Y F99G P149F F156T",6
"lib1","SARS-CoV-2","TGGGATAAGGCAAAAC",5,230.5,6.93,-3.84,0.22,1.5,1.14,0.01,">1 nonsynonymous","N1L E10L I142L Y175M",4
"lib1","SARS-CoV-2","TGGGATACGGAATATG",5,131.35,9.36,-1.41,0.07,2.81,1.13,0,">1 nonsynonymous","L38I G166Q T201K",3
"lib1","SARS-CoV-2","TGGGATACTAGCAACA",1,30,10.09,-0.67,0.1,2.81,1.12,0.01,">1 nonsynonymous","E141K E154C T201L",3
"lib1","SARS-CoV-2","TGGGATACTTGAATCC",1,49.22,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","T3R G166I G172S",3
"lib1","SARS-CoV-2","TGGGATCCACTTCCAA",6,28.13,7.51,-3.25,0.2,1.5,1.13,0.01,">1 nonsynonymous","K56H D68I",2
"lib1","SARS-CoV-2","TGGGATGGAAGAAGTT",1,9.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V71L V103T",2
"lib1","SARS-CoV-2","TGGGATTAGACGTTTG",2,1349.21,10.72,-0.04,0.04,2.93,1.03,0,">1 nonsynonymous","T3G S184T",2
"lib1","SARS-CoV-2","TGGGATTAGTTCTTGA",2,18,10.27,-0.49,0.14,2.78,1.03,0.01,">1 nonsynonymous","I2T L111S V173I",3
"lib1","SARS-CoV-2","TGGGATTATAAGGAAA",3,44.45,10.91,0.15,0.08,2.91,1,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","TGGGATTTAAAAAAAA",2,30.42,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G83W P133Y Y165K",3
"lib1","SARS-CoV-2","TGGGCAAACCTATACT",2,51.34,9.46,-1.3,0.07,1.96,1.1,0,">1 nonsynonymous","N107V N120S",2
"lib1","SARS-CoV-2","TGGGCAAACTTCTAAC",8,166.19,9.2,-1.56,0.06,2.78,1.12,0,">1 nonsynonymous","L5R Y119L",2
"lib1","SARS-CoV-2","TGGGCAAAGTAGCACG",1,25.83,10.73,-0.03,0.1,2.96,1,0,">1 nonsynonymous","N64H K132S",2
"lib1","SARS-CoV-2","TGGGCACTGCTCTGCG",7,0.92,NA,NA,NA,NA,NA,NA,"stop","P82Q G146L T201*",3
"lib1","SARS-CoV-2","TGGGCACTGTTCTTCA",2,26.17,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","A105M G117L Q144Y V180R",4
"lib1","SARS-CoV-2","TGGGCAGAGGCAGGAA",3,66.74,10.54,-0.22,0.04,2.89,1,0,"1 nonsynonymous","E135N",1
"lib1","SARS-CoV-2","TGGGCATAAACTTGCT",2,17.85,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","R25T V103L",2
"lib1","SARS-CoV-2","TGGGCATCTTATATCA",1,17.8,10.51,-0.25,0.05,2.92,1.01,0,"1 nonsynonymous","D98V",1
"lib1","SARS-CoV-2","TGGGCATGCAACAAGT",5,19.63,6,-4.76,1.81,1.5,1.19,0.02,">1 nonsynonymous","L5E K94Q G116Q R136N",4
"lib1","SARS-CoV-2","TGGGCATTCAATGGGA",3,39.14,10.81,0.04,0.06,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGGCCAGTTTAGGGT",7,73.78,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","N24R N58R N120I K132P G152I",5
"lib1","SARS-CoV-2","TGGGCCCGATGCGACA",5,120.49,10.36,-0.4,0.07,2.82,1,0,">1 nonsynonymous","Q84K T85K T100A",3
"lib1","SARS-CoV-2","TGGGCCCTAATTGACC",5,39.16,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G51M N58A L95W N109M K199N",5
"lib1","SARS-CoV-2","TGGGCCGATGCTTTCA",1,11.99,10.74,-0.02,0.04,3,1,0,">1 nonsynonymous","Y39V G83S",2
"lib1","SARS-CoV-2","TGGGCCGCTAAAACAA",1,10.34,8.82,-1.95,0.27,1.71,1.11,0.03,">1 nonsynonymous","A22L G74K",2
"lib1","SARS-CoV-2","TGGGCCGTGGAAATGA",4,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S D34Y Y50P C61R K114M E141Y S164I",7
"lib1","SARS-CoV-2","TGGGCCTAAAGTCAAC",3,21.26,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A14K L60T P149N F167V",4
"lib1","SARS-CoV-2","TGGGCCTAAGTGTCCC",3,10.07,6,-4.76,1.37,3,1.06,0,">1 nonsynonymous","I80W Y119D",2
"lib1","SARS-CoV-2","TGGGCCTGTAACTATT",3,54.66,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G101I",1
"lib1","SARS-CoV-2","TGGGCCTGTCCACTAG",2,0.52,NA,NA,NA,NA,NA,NA,"stop","S45F L131* Y178N",3
"lib1","SARS-CoV-2","TGGGCGAAGTTACAAG",1,17.77,8.34,-2.42,0.1,2.88,1.08,0,"1 nonsynonymous","T170I",1
"lib1","SARS-CoV-2","TGGGCGATACAATATT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","TGGGCGCATGGTGATC",2,22.51,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","R25L T55Y P96L",3
"lib1","SARS-CoV-2","TGGGCGTACCCTTGGC",2,73.92,10.64,-0.12,0.09,2.91,1.01,0,">1 nonsynonymous","A42H L60S",2
"lib1","SARS-CoV-2","TGGGCGTTTTACTTTA",2,88.04,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C61Y N64E Y91R G172T T201K",5
"lib1","SARS-CoV-2","TGGGCTACCGCGAGAC",1,12.92,9.68,-1.09,0.17,2.61,1,0.01,"1 nonsynonymous","N107T",1
"lib1","SARS-CoV-2","TGGGCTATAGCTGTTC",2,27.66,9.23,-1.53,0.13,1.88,1.11,0.01,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","TGGGCTATCAAGTGCG",1,1.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133E",1
"lib1","SARS-CoV-2","TGGGCTCAATCGACTA",4,40.2,6.76,-4,0.5,1.5,1.3,0.04,">1 nonsynonymous","F44H T63K K94L T201V",4
"lib1","SARS-CoV-2","TGGGCTCCATAGAATA",6,67.7,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F8L A42L V77E Y119V Q176V",5
"lib1","SARS-CoV-2","TGGGCTGAAATACGAA",5,0.08,NA,NA,NA,NA,NA,NA,"stop","R27* C49S L95F G155Q A192E",5
"lib1","SARS-CoV-2","TGGGCTGACTAAGTAG",1,40.86,9.09,-1.68,0.12,1.87,1.11,0.01,">1 nonsynonymous","A33I D59S Y66S G117L",4
"lib1","SARS-CoV-2","TGGGCTTCCACTCATC",5,59.04,6.28,-4.49,0.29,1.5,1.11,0,">1 nonsynonymous","W106T G146R C150R T170S",4
"lib1","SARS-CoV-2","TGGGCTTGAGCTTAGT",5,60.36,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","G86Q L131W S184H T201I",4
"lib1","SARS-CoV-2","TGGGCTTTCTGCGCGA",11,66.98,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","P82A T170R V181E",3
"lib1","SARS-CoV-2","TGGGGAAACGACATAT",2,17.25,6,-4.76,2,1.5,1.24,0.07,">1 nonsynonymous","A14M T46A F167S",3
"lib1","SARS-CoV-2","TGGGGAAACTGTGACA",1,28.02,6.2,-4.56,0.76,1.5,1.21,0.02,">1 nonsynonymous","N30A G172D",2
"lib1","SARS-CoV-2","TGGGGAAATCAATGAA",5,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S P96V R127Q",3
"lib1","SARS-CoV-2","TGGGGAACAAATGAAT",3,47.94,9.65,-1.11,0.08,1.92,1,0,">1 nonsynonymous","W23S E141R",2
"lib1","SARS-CoV-2","TGGGGAACATTATATC",5,70.97,10.55,-0.21,0.04,2.92,1,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","TGGGGAACGATCCGTC",3,31.55,6,-4.76,2,2.58,1.16,0,">1 nonsynonymous","A14S T63Y V71E S184A T201R",5
"lib1","SARS-CoV-2","TGGGGACTTAAATCTA",4,57.73,10.58,-0.19,0.06,2.84,1.11,0,">1 nonsynonymous","A145V T201R",2
"lib1","SARS-CoV-2","TGGGGAGGGATAAACA",3,40.19,7.81,-2.96,0.25,1.5,1.17,0.02,">1 nonsynonymous","T3Q V37Q Y66N F126V R136A T148M",6
"lib1","SARS-CoV-2","TGGGGAGTGCATCCAG",19,81.76,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G51E Y143K Y175F",3
"lib1","SARS-CoV-2","TGGGGATATTTACCAA",3,17.78,8.59,-2.18,0.35,1.5,1.23,0.06,"1 nonsynonymous","W23L",1
"lib1","SARS-CoV-2","TGGGGATGCCCCTCTG",1,33.4,10.27,-0.49,0.1,2.75,1,0,">1 nonsynonymous","N40A F62N",2
"lib1","SARS-CoV-2","TGGGGATTCCTCATGG",13,123.92,10.79,0.02,0.08,2.9,1.05,0,">1 nonsynonymous","T15S Y39L",2
"lib1","SARS-CoV-2","TGGGGCAATACAGAAG",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P R16Q S69G A89G P96D S113T",6
"lib1","SARS-CoV-2","TGGGGCATACTCTTAG",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W T170A",2
"lib1","SARS-CoV-2","TGGGGCCTATCGAGAG",5,22.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34F D112G Y143L",3
"lib1","SARS-CoV-2","TGGGGCGCATGCTGAT",2,22.83,10.1,-0.66,0.09,2.76,1.06,0,">1 nonsynonymous","F12L Q84R",2
"lib1","SARS-CoV-2","TGGGGCTTGGATGTGA",1,1.56,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","TGGGGGTAATAAGTAG",1,44,10.86,0.1,0.12,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGGGGTTTTAAGATT",2,46.46,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","L5D S53H A89K N118R",4
"lib1","SARS-CoV-2","TGGGGTAGATAATGCG",6,131.93,10.72,-0.05,0.04,2.9,1.05,0,">1 nonsynonymous","T15S P149I",2
"lib1","SARS-CoV-2","TGGGGTGAATTTCGTT",3,27.68,6,-4.76,2,3,1.22,0,">1 nonsynonymous","V77T D90F P96Q",3
"lib1","SARS-CoV-2","TGGGGTGACCGCACAA",4,68.89,6.22,-4.55,0.47,1.5,1.13,0.01,">1 nonsynonymous","S19T W106R R127G F167S",4
"lib1","SARS-CoV-2","TGGGGTGTTGACAATT",4,12.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41A C61I F99N K132Y P169S",5
"lib1","SARS-CoV-2","TGGGGTTAAGATTTCA",6,175.26,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D90I C158S",2
"lib1","SARS-CoV-2","TGGGGTTACGCTGGTC",8,113.77,10.72,-0.05,0.05,2.9,1.06,0,"1 nonsynonymous","Y123H",1
"lib1","SARS-CoV-2","TGGGGTTTACTCTAAG",2,1.05,NA,NA,NA,NA,NA,NA,"stop","L5S A42R V52T V71E D97G Q163E K198*",7
"lib1","SARS-CoV-2","TGGGTAACACACCTAG",1,19.5,7.88,-2.89,0.21,1.9,1.09,0.01,">1 nonsynonymous","Y119L I142K",2
"lib1","SARS-CoV-2","TGGGTAAGACCTTCAC",5,7.61,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G51F C102N",2
"lib1","SARS-CoV-2","TGGGTAATAGATATTT",1,10.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41W G86Y F167L",3
"lib1","SARS-CoV-2","TGGGTAATATGCTAGT",5,36.23,9.72,-1.05,0.15,1.91,1.04,0.01,"1 nonsynonymous","Y50S",1
"lib1","SARS-CoV-2","TGGGTAGCTAGAATGA",1,18.63,10.69,-0.08,0.06,2.98,1.03,0,"1 nonsynonymous","I2V",1
"lib1","SARS-CoV-2","TGGGTAGGGGCTACGC",8,3.67,NA,NA,NA,NA,NA,NA,"stop","P177*",1
"lib1","SARS-CoV-2","TGGGTATAATGAGAGG",6,0,NA,NA,NA,NA,NA,NA,"stop","F17* N58V P96T G146A",4
"lib1","SARS-CoV-2","TGGGTATACCAAACCT",1,49.65,9.51,-1.26,0.11,2.4,1.08,0,"1 nonsynonymous","D112L",1
"lib1","SARS-CoV-2","TGGGTCAACTTGTTCA",8,134.33,10.81,0.05,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGGTCAATCATCTGG",7,17.58,8.56,-2.2,0.12,1.98,1.09,0.01,">1 nonsynonymous","T85A W106S F156L",3
"lib1","SARS-CoV-2","TGGGTCCCCTATCTCT",13,106.65,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R25V A89R A105T R124N A190G",5
"lib1","SARS-CoV-2","TGGGTCCTACCCACGC",4,23.32,9.34,-1.42,0.24,1.5,1.08,0.04,">1 nonsynonymous","G51K W106L",2
"lib1","SARS-CoV-2","TGGGTCCTGTTTATGC",1,0.63,NA,NA,NA,NA,NA,NA,"stop","S43* V173M",2
"lib1","SARS-CoV-2","TGGGTCTAATAAAGAT",1,67.76,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L38N P54T G86V",3
"lib1","SARS-CoV-2","TGGGTCTCACATCGGC",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D A42Y R127F",3
"lib1","SARS-CoV-2","TGGGTCTCACTAAGAC",6,145.81,8.71,-2.06,0.16,1.6,1.13,0.01,">1 nonsynonymous","T46S L57W L122N K132S F160T",5
"lib1","SARS-CoV-2","TGGGTCTTACCGATAG",1,11.99,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","W23R I88M P96R",3
"lib1","SARS-CoV-2","TGGGTCTTTATCAAAT",5,19.38,9.65,-1.11,0.25,1.88,1.1,0.03,">1 nonsynonymous","V52C T100W S139V",3
"lib1","SARS-CoV-2","TGGGTGACAACAAGCA",4,173.24,10.71,-0.05,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGGTGACGTCTACTA",7,128.58,10.71,-0.05,0.05,2.92,1.04,0,">1 nonsynonymous","K48R T55F",2
"lib1","SARS-CoV-2","TGGGTGACTAAGGTAT",8,98.34,7.06,-3.7,0.22,1.5,1.14,0.01,">1 nonsynonymous","F8I N157P",2
"lib1","SARS-CoV-2","TGGGTGACTGTTTGTC",6,48.32,6,-4.76,1.94,1.5,1.12,0.01,">1 nonsynonymous","L38F D68L I80P F160A",4
"lib1","SARS-CoV-2","TGGGTGATTCAAAGCA",6,122.42,10.42,-0.35,0.05,2.9,1.05,0,">1 nonsynonymous","N24V K87I",2
"lib1","SARS-CoV-2","TGGGTGCATACGATTT",3,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34M",1
"lib1","SARS-CoV-2","TGGGTGCGTGAGTACA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","N30* C61P F156Y",3
"lib1","SARS-CoV-2","TGGGTGCTACCAGCTT",2,38.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19Q K132P R179W",3
"lib1","SARS-CoV-2","TGGGTTAAGTCGAAAC",3,50.71,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G51I L60K A81P A89G I138Q S147R",6
"lib1","SARS-CoV-2","TGGGTTACCCCACGCA",1,21.56,10.23,-0.54,0.07,2.85,1.07,0,">1 nonsynonymous","N40Q T85P",2
"lib1","SARS-CoV-2","TGGGTTACGATAAAGC",3,3.31,NA,NA,NA,NA,NA,NA,"stop","S36* C61H Y91M C102N Y121* N157H Q176S",7
"lib1","SARS-CoV-2","TGGGTTAGGCGAGACA",2,12.15,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","P7R D68N W106T",3
"lib1","SARS-CoV-2","TGGGTTCAAACAACAT",1,30.72,7.74,-3.03,0.4,1.5,1.18,0.05,">1 nonsynonymous","K94F Y143H",2
"lib1","SARS-CoV-2","TGGGTTCAAGAATAAT",6,4.22,NA,NA,NA,NA,NA,NA,"stop","S45* N92S F99V I142L",4
"lib1","SARS-CoV-2","TGGGTTCCTTATCATG",3,47.75,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V32F Y39G R124T E141L N151Q",5
"lib1","SARS-CoV-2","TGGGTTCTAACTAGCT",7,63.19,9.96,-0.81,0.07,2,1.03,0,">1 nonsynonymous","S41L K48F S129I",3
"lib1","SARS-CoV-2","TGGGTTCTTACCTACC",3,72.81,8.55,-2.22,0.07,2.93,1.03,0,">1 nonsynonymous","N4P Y175S",2
"lib1","SARS-CoV-2","TGGGTTGAAGATACAC",2,48.7,6.1,-4.66,0.74,1.5,1.16,0.01,">1 nonsynonymous","F17I K114Q P149L F167L",4
"lib1","SARS-CoV-2","TGGGTTGCACGTACTA",15,89.32,6,-4.76,2,1.5,1.3,0.03,">1 nonsynonymous","V103K S139Y",2
"lib1","SARS-CoV-2","TGGGTTGCTAAATATG",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R L57Q A81N K94H P133S S200Y",6
"lib1","SARS-CoV-2","TGGGTTGGAATGTTAG",13,172.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83Y L95R N120V",3
"lib1","SARS-CoV-2","TGGGTTTAACCCTATG",1,8.74,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y39R C49K S69E S113P S139R F160I Q168T Q176V",8
"lib1","SARS-CoV-2","TGGGTTTACCAAGTGA",5,29.92,10.3,-0.46,0.07,2.93,1,0,"1 nonsynonymous","K87Q",1
"lib1","SARS-CoV-2","TGGGTTTGATGGACAA",7,183.36,6.18,-4.59,0.56,1.5,1.17,0.01,">1 nonsynonymous","D90A G172M",2
"lib1","SARS-CoV-2","TGGGTTTGCCCGTTAA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","V71* S200D",2
"lib1","SARS-CoV-2","TGGGTTTTCGCCAATA",8,168.7,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C61N P133L I142S",3
"lib1","SARS-CoV-2","TGGTAAAAAATAGGGG",1,44.94,6.29,-4.47,0.23,1.5,1.09,0,">1 nonsynonymous","V77R S129A Y143A",3
"lib1","SARS-CoV-2","TGGTAAAAAGTGCAGA",12,266.84,10.43,-0.33,0.03,2.88,1.04,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","TGGTAAAACACGAAAG",2,24.76,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","G116T P161I",2
"lib1","SARS-CoV-2","TGGTAAAACGTAACAA",5,58.43,10.74,-0.02,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTAAAAGCTGGATT",5,29.36,9.16,-1.61,0.23,1.5,1,0.02,">1 nonsynonymous","K56D W106G G116V",3
"lib1","SARS-CoV-2","TGGTAAAATATCTAAG",6,47.58,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","T63P L122M E141F Y165A P177F H189I",6
"lib1","SARS-CoV-2","TGGTAAACCCCTACGT",2,39.52,7.86,-2.9,0.24,1.5,1.14,0.02,">1 nonsynonymous","D59T D68E",2
"lib1","SARS-CoV-2","TGGTAAACCGAGTGGA",5,25.7,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","T55N A105G Y143N C158N",4
"lib1","SARS-CoV-2","TGGTAAACTCGATATA",5,49.88,6.07,-4.7,0.59,1.5,1.08,0.01,">1 nonsynonymous","I28S N171P",2
"lib1","SARS-CoV-2","TGGTAAACTGTAAGAA",8,1.46,NA,NA,NA,NA,NA,NA,"stop","N40H D59V A81H Q144N N151* R179S",6
"lib1","SARS-CoV-2","TGGTAAAGCAACCGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* V103D N107Q F167V",4
"lib1","SARS-CoV-2","TGGTAAATCAGTAGTC",12,162.56,10.36,-0.41,0.03,2.89,1.05,0,">1 nonsynonymous","A22Q D98P",2
"lib1","SARS-CoV-2","TGGTAACAAGTTATGT",4,9.42,6.26,-4.5,1.39,1.5,1.22,0.04,">1 nonsynonymous","C61T D97S K114I L122V T140L P161C",6
"lib1","SARS-CoV-2","TGGTAACACAGTATAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F17* R179P T201S",3
"lib1","SARS-CoV-2","TGGTAACATACACGGT",4,45.76,6,-4.76,2,3,1.22,0,">1 nonsynonymous","C61I W106L Y143R C150Y",4
"lib1","SARS-CoV-2","TGGTAACCAATACGGT",8,183.65,9.18,-1.59,0.05,2.82,1.12,0,">1 nonsynonymous","N4Q F156E",2
"lib1","SARS-CoV-2","TGGTAACGTATCTAGA",2,12.97,10.14,-0.62,0.08,2.93,1.04,0,">1 nonsynonymous","Q84F T148S K198L",3
"lib1","SARS-CoV-2","TGGTAACTGTTAACAC",1,14.11,8.42,-2.34,0.33,1.85,1.04,0.04,"1 nonsynonymous","N157Q",1
"lib1","SARS-CoV-2","TGGTAAGACGAGGCAA",4,98.38,8.57,-2.2,0.18,2,1.11,0.01,">1 nonsynonymous","G83R K128G T140H N157L",4
"lib1","SARS-CoV-2","TGGTAAGAGGATGAGT",2,57.58,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","G86V D97K",2
"lib1","SARS-CoV-2","TGGTAAGCAAGTACTA",1,30.38,9.95,-0.82,0.08,2.73,1.1,0,"1 nonsynonymous","N118T",1
"lib1","SARS-CoV-2","TGGTAAGGTAAATCAT",3,64.88,10.62,-0.14,0.1,2.81,1.03,0,"1 nonsynonymous","R136H",1
"lib1","SARS-CoV-2","TGGTAAGTGTAAATGC",3,1.22,NA,NA,NA,NA,NA,NA,"stop","F62Y Y93*",2
"lib1","SARS-CoV-2","TGGTAAGTGTGGTAAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F S43T F99Y",3
"lib1","SARS-CoV-2","TGGTAATCACTGGTCG",4,14.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13K S41P T63K N64T A81F I104M T140L F167S",8
"lib1","SARS-CoV-2","TGGTAATCATGCTTCC",1,15.41,10.67,-0.09,0.03,2.99,1.01,0,"1 nonsynonymous","L60R",1
"lib1","SARS-CoV-2","TGGTAATGATTAACTT",4,64.05,10.72,-0.05,0.09,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTAATGCAAGTCAA",8,151,6.01,-4.76,0.66,1.5,1.16,0.01,">1 nonsynonymous","I138A C150Y",2
"lib1","SARS-CoV-2","TGGTAATTTCTGAGGA",4,66.62,9.65,-1.11,0.16,1.9,1,0.01,">1 nonsynonymous","N30M Q163P P197Q",3
"lib1","SARS-CoV-2","TGGTACAACTTGCAGA",4,30.25,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","I80S Y91M",2
"lib1","SARS-CoV-2","TGGTACACTTAATTTC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","S41* F62H",2
"lib1","SARS-CoV-2","TGGTACAGATATGCTT",8,159.71,10.13,-0.63,0.06,2.67,1.03,0,">1 nonsynonymous","S29R S69M",2
"lib1","SARS-CoV-2","TGGTACAGCCGAGAAA",10,161.59,10.74,-0.02,0.06,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTACAGTACTTGAT",7,167.45,9.85,-0.91,0.06,2.66,1.06,0,">1 nonsynonymous","Y66T G155L",2
"lib1","SARS-CoV-2","TGGTACATAATGGCGA",1,90.71,10.53,-0.23,0.04,2.88,1.06,0,"1 nonsynonymous","A18K",1
"lib1","SARS-CoV-2","TGGTACATTTTAAAAA",2,9.74,10.82,0.06,0.12,2.88,1,0,">1 nonsynonymous","I28W C61A E186G",3
"lib1","SARS-CoV-2","TGGTACATTTTAATCA",2,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105D S129A G155D T201S",4
"lib1","SARS-CoV-2","TGGTACCAAGAAACAA",8,82.26,6.96,-3.8,0.38,1.5,1.16,0.03,">1 nonsynonymous","Y165S N171C",2
"lib1","SARS-CoV-2","TGGTACCGATGCCACC",2,141.07,9.47,-1.29,0.1,2.54,1.07,0,">1 nonsynonymous","Y39L Y50W N151G Q176L",4
"lib1","SARS-CoV-2","TGGTACCGCCAAACTA",5,62.63,10.82,0.05,0.09,2.95,1.01,0,"1 nonsynonymous","T100R",1
"lib1","SARS-CoV-2","TGGTACCTAAAGAGTA",5,59.27,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F44N I72R",2
"lib1","SARS-CoV-2","TGGTACCTTACGTCTC",1,684.15,10.73,-0.03,0.04,2.92,1.04,0,"1 nonsynonymous","K56T",1
"lib1","SARS-CoV-2","TGGTACGAACACATGA",2,42.4,9.65,-1.11,0.12,2.3,1.11,0.01,">1 nonsynonymous","N120Q L162Y",2
"lib1","SARS-CoV-2","TGGTACGAACTTTAGC",6,59.81,6,-4.76,0.93,1.5,1.2,0.01,">1 nonsynonymous","V37L G51S C61P A81K D97A N157Y",6
"lib1","SARS-CoV-2","TGGTACGATATTTTTC",1,29.38,10.01,-0.75,0.1,2.3,1.01,0,">1 nonsynonymous","P82V N151R",2
"lib1","SARS-CoV-2","TGGTACGCAAAAATTG",7,23.85,8.13,-2.64,0.54,1.5,1,0.07,">1 nonsynonymous","V37L C102R S113W R136L N171S T201V",6
"lib1","SARS-CoV-2","TGGTACGTGAACTAGA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E Y50S T100N G166S",4
"lib1","SARS-CoV-2","TGGTACGTTGTGCCAG",3,1.65,NA,NA,NA,NA,NA,NA,"stop","D90R N107* V173K",3
"lib1","SARS-CoV-2","TGGTACTAACGTAATG",2,45.91,10.63,-0.13,0.08,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTACTTGCGAAAAG",2,21.63,9.97,-0.8,0.19,2.26,1.03,0.01,">1 nonsynonymous","Y50T T201F",2
"lib1","SARS-CoV-2","TGGTAGACATCACGTG",3,12.67,6.11,-4.65,0.97,1.5,1.12,0.05,">1 nonsynonymous","D98A G117K C158G",3
"lib1","SARS-CoV-2","TGGTAGACGGTAACAA",4,29.97,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L5M Q84Y D98G D112Q N120M",5
"lib1","SARS-CoV-2","TGGTAGAGTACAAGTA",2,51.07,10.67,-0.09,0.04,2.92,1.04,0,"1 nonsynonymous","T63C",1
"lib1","SARS-CoV-2","TGGTAGATAGCTGAAA",6,84.53,10.02,-0.74,0.11,2.28,1.05,0,">1 nonsynonymous","I2E D97H K128S E135Y",4
"lib1","SARS-CoV-2","TGGTAGCATTCTTCTT",2,24.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35V Y91P P96Y E135K",4
"lib1","SARS-CoV-2","TGGTAGCGCATATACA",6,46.82,6,-4.76,2,3,1.26,0,">1 nonsynonymous","C61I S108G R124I G155P",4
"lib1","SARS-CoV-2","TGGTAGCTCCATAGAG",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V L57R D90A Y119L T201N",5
"lib1","SARS-CoV-2","TGGTAGGATTTATCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","T63V L95* N107G P149A T201R",5
"lib1","SARS-CoV-2","TGGTAGGGAATACGCT",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69E G74A A81T T170S",4
"lib1","SARS-CoV-2","TGGTAGTGATCAATAA",15,0.53,NA,NA,NA,NA,NA,NA,"stop","I2P C49I I142* K199D",4
"lib1","SARS-CoV-2","TGGTATAACTTTGCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6A P96* R124H",3
"lib1","SARS-CoV-2","TGGTATAATTAAAGAA",6,53.21,9.79,-0.97,0.06,2.64,1.01,0,">1 nonsynonymous","T15S A22I A145V",3
"lib1","SARS-CoV-2","TGGTATACAACAACGT",1,37.06,8.78,-1.99,0.23,1.5,1.03,0.04,">1 nonsynonymous","Y39P D98F T148M V180I",4
"lib1","SARS-CoV-2","TGGTATACCGATTAAT",9,98.56,7.61,-3.15,0.42,1.5,1,0.07,">1 nonsynonymous","N1V T63C P177Y",3
"lib1","SARS-CoV-2","TGGTATAGGACACAGT",5,96.17,10.1,-0.66,0.07,2.59,1.04,0,">1 nonsynonymous","D90L G152M",2
"lib1","SARS-CoV-2","TGGTATAGGACGGACA",2,30.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N30C L38F G74V P149T",4
"lib1","SARS-CoV-2","TGGTATATAGTCACTG",7,0.36,NA,NA,NA,NA,NA,NA,"stop","S19A A33S S41* I138C",4
"lib1","SARS-CoV-2","TGGTATCAAATGAATA",5,4.1,NA,NA,NA,NA,NA,NA,"stop","T63F G83T K132F N157V R179G K199*",6
"lib1","SARS-CoV-2","TGGTATCACTCAAATT",5,77.01,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44R C49T L111P R127G P133R N151V P177C",7
"lib1","SARS-CoV-2","TGGTATCAGGATGCGA",7,206.27,10.43,-0.33,0.06,2.91,1.04,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","TGGTATCCTCCAGCCA",1,5.06,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","I88Q D98T V103R S139N",4
"lib1","SARS-CoV-2","TGGTATCTATCAGAAC",1,6.1,10.68,-0.08,0.19,2.73,1.22,0.01,">1 nonsynonymous","G116V A192P",2
"lib1","SARS-CoV-2","TGGTATCTTAAGTTTG",3,70.45,10.75,-0.01,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTATGACTACAGAA",7,50.84,6,-4.76,0.39,1.54,1.11,0,">1 nonsynonymous","C6R G51I K128D F134M",4
"lib1","SARS-CoV-2","TGGTATGAGACAAACT",7,94.67,10.8,0.04,0.06,2.92,1.02,0,">1 nonsynonymous","S53I N110K",2
"lib1","SARS-CoV-2","TGGTATGATACCTGGG",1,120.17,10.43,-0.33,0.04,2.92,1.04,0,">1 nonsynonymous","D97I G116L N171M",3
"lib1","SARS-CoV-2","TGGTATGATTATAGTA",1,25.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A D90C",2
"lib1","SARS-CoV-2","TGGTATGCTGACGACG",7,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66S F70V K199L",3
"lib1","SARS-CoV-2","TGGTATTGACCCGGCA",5,1.98,NA,NA,NA,NA,NA,NA,"stop","F17Y T100S L122A P133*",4
"lib1","SARS-CoV-2","TGGTATTGTACCTTAA",6,112.94,9.94,-0.82,0.08,2.22,1.04,0,">1 nonsynonymous","Y35R N151W",2
"lib1","SARS-CoV-2","TGGTATTTGCGACCCG",4,35.3,6,-4.76,1.3,1.5,1.2,0.03,">1 nonsynonymous","C6G Y21K S45I I88H Y121R",5
"lib1","SARS-CoV-2","TGGTCAAAAGGACCGT",3,18.15,10.78,0.01,0.07,2.92,1.05,0,"1 nonsynonymous","P197T",1
"lib1","SARS-CoV-2","TGGTCAACCACTTCAT",2,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W N58S G83S V103Y",4
"lib1","SARS-CoV-2","TGGTCAACTACACACG",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143L V173S",2
"lib1","SARS-CoV-2","TGGTCAATGACACTTC",12,215.01,10.72,-0.04,0.06,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTCAATTATCAACT",10,56.86,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S19E A89L E141I",3
"lib1","SARS-CoV-2","TGGTCAATTGCAAACA",4,14.22,10.66,-0.1,0.13,2.81,1.09,0.01,">1 nonsynonymous","L5V C61W S184T",3
"lib1","SARS-CoV-2","TGGTCACACGCAAGCT",7,118.25,10.75,-0.01,0.05,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTCACCAATTCACG",5,602.22,8.28,-2.49,0.11,2.44,1.07,0,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","TGGTCACCTATTTATA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R D90I R179F",3
"lib1","SARS-CoV-2","TGGTCACGGCAGTTAA",10,2.1,NA,NA,NA,NA,NA,NA,"stop","L5P S41N V65A T85* T100I R136G",6
"lib1","SARS-CoV-2","TGGTCACGTGTCTAAT",4,64.66,6,-4.76,2,1.5,1.28,0.03,"1 nonsynonymous","R124F",1
"lib1","SARS-CoV-2","TGGTCAGAAAACCGGG",8,170.13,7.76,-3,0.18,1.62,1.13,0.01,">1 nonsynonymous","G9K N171K",2
"lib1","SARS-CoV-2","TGGTCAGGGCAACAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","C6S T46P N110M K132* F167V",5
"lib1","SARS-CoV-2","TGGTCAGGTCAGGATA",1,7,6,-4.76,2,1.5,1.25,0.06,"1 nonsynonymous","Y178P",1
"lib1","SARS-CoV-2","TGGTCAGTTATAAGGT",6,68.54,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N1W D137S Y175S",3
"lib1","SARS-CoV-2","TGGTCATACCAACACC",4,143.76,10.11,-0.65,0.07,2.76,1.06,0,">1 nonsynonymous","N24H G155V",2
"lib1","SARS-CoV-2","TGGTCATTAGGTCAGC",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y L122P G166D",3
"lib1","SARS-CoV-2","TGGTCCAATCATAAGT",8,1.59,NA,NA,NA,NA,NA,NA,"stop","F47M N64Q G152S Q163*",4
"lib1","SARS-CoV-2","TGGTCCACGGGCATTA",2,31.42,6.83,-3.94,0.63,1.5,1.25,0.06,">1 nonsynonymous","S41G A89R P169E",3
"lib1","SARS-CoV-2","TGGTCCGCCTCACTGT",2,53.96,10.5,-0.26,0.05,2.9,1.08,0,">1 nonsynonymous","L122N N130Y",2
"lib1","SARS-CoV-2","TGGTCCGGATTAACAC",6,144.02,10.73,-0.03,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTCCTTTTAATCTC",2,1.64,NA,NA,NA,NA,NA,NA,"stop","C102E Y119*",2
"lib1","SARS-CoV-2","TGGTCGAATTAATAAC",1,18.82,7.53,-3.24,0.4,1.5,1,0.08,">1 nonsynonymous","S43A G101V T140G",3
"lib1","SARS-CoV-2","TGGTCGACTGTCTCAG",1,9.68,6.57,-4.2,1.86,3,1.06,0.01,">1 nonsynonymous","I2R D68M S139H G155R",4
"lib1","SARS-CoV-2","TGGTCGCACTTGACAC",5,44.44,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N58S R78T Y91A N120L T170Y",5
"lib1","SARS-CoV-2","TGGTCGCCCACATCTA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","P7L R25* A42R A105F R136T",5
"lib1","SARS-CoV-2","TGGTCGTAATGAAGCC",7,62.78,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V32M P54M L95N N107R S139R",5
"lib1","SARS-CoV-2","TGGTCGTACTTATTAA",1,26.22,8.97,-1.8,0.16,2.37,1.19,0.01,">1 nonsynonymous","P7T C61K D90A N151A Q163N",5
"lib1","SARS-CoV-2","TGGTCGTAGGAGTAGA",1,135.95,10.65,-0.11,0.05,2.89,1.04,0,">1 nonsynonymous","R73K G146S",2
"lib1","SARS-CoV-2","TGGTCGTCAATACCCA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M L60F I88C D137M S147Y G174R S200I",7
"lib1","SARS-CoV-2","TGGTCTAAAAAAAAGG",2,49.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","Y35P P54N F70N G101S P177N",5
"lib1","SARS-CoV-2","TGGTCTAATATGTAAA",3,20.1,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T46V V77E A81L C102V G155S Y178H",6
"lib1","SARS-CoV-2","TGGTCTACCATGTAAT",7,37.48,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I80Q K94C V103C Q163W S184M",5
"lib1","SARS-CoV-2","TGGTCTATATGATATT",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108V G117N L162I P169S",4
"lib1","SARS-CoV-2","TGGTCTCACCCGTAAT",8,2.52,NA,NA,NA,NA,NA,NA,"stop","F17* W23M K48R Q144F P149L",5
"lib1","SARS-CoV-2","TGGTCTGGTCCTAGTA",1,49.86,8.22,-2.54,0.18,2.28,1.28,0.02,">1 nonsynonymous","L122V F156W Y175M K199S",4
"lib1","SARS-CoV-2","TGGTCTTCAAATACGA",8,53.27,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","K48G F134V",2
"lib1","SARS-CoV-2","TGGTCTTTGCGGCATA",2,37.75,10.05,-0.72,0.12,2.34,1.08,0.01,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","TGGTGAAAAAGCTAGT",2,7.99,7.52,-3.25,0.49,1.5,1.06,0.03,"1 nonsynonymous","F70H",1
"lib1","SARS-CoV-2","TGGTGAAAACTACCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","I88E Y143C Q176*",3
"lib1","SARS-CoV-2","TGGTGAAATTGCGGTA",8,90.07,9.67,-1.09,0.15,1.88,1.1,0.01,">1 nonsynonymous","A14F L60Q",2
"lib1","SARS-CoV-2","TGGTGAAGTTACGTGA",4,79.94,10.46,-0.31,0.07,2.88,1.07,0,"1 nonsynonymous","F134R",1
"lib1","SARS-CoV-2","TGGTGACAATGCTCTA",1,7.17,8.35,-2.41,0.22,2.09,1.06,0.02,">1 nonsynonymous","S53A A105G F134G G166W",4
"lib1","SARS-CoV-2","TGGTGACACAAAACTG",1,13.61,10.88,0.12,0.09,2.89,1.05,0,"1 nonsynonymous","E141D",1
"lib1","SARS-CoV-2","TGGTGACACATATATG",2,0.63,NA,NA,NA,NA,NA,NA,"stop","L5* T55C V77S D112F N130T P149L Q168R",7
"lib1","SARS-CoV-2","TGGTGACAGTAAGATT",3,36.11,10.77,0,0.04,2.98,1,0,"1 nonsynonymous","Y39F",1
"lib1","SARS-CoV-2","TGGTGACGCATAATAA",3,86.48,10.79,0.03,0.07,2.86,1.09,0,"1 nonsynonymous","S184T",1
"lib1","SARS-CoV-2","TGGTGACGCCAACCTT",1,24.21,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","E10Q Y93I Y178P",3
"lib1","SARS-CoV-2","TGGTGACTTTAGGAAT",7,120.29,10.58,-0.18,0.06,2.92,1.05,0,">1 nonsynonymous","A105S E141S",2
"lib1","SARS-CoV-2","TGGTGAGACGAACCTA",8,7.65,7.19,-3.58,0.57,2.14,1.08,0.02,">1 nonsynonymous","I2N V37S K48P P54S I104R S139I L183D",7
"lib1","SARS-CoV-2","TGGTGAGCACTTGAAC",7,187.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V11S N110V K132D F156S Y175I",5
"lib1","SARS-CoV-2","TGGTGAGTTTCTCATA",9,94.37,10.68,-0.09,0.08,2.86,1.08,0,"1 nonsynonymous","V115F",1
"lib1","SARS-CoV-2","TGGTGATAACTATGAA",2,19.61,10.37,-0.39,0.07,3,1.04,0,">1 nonsynonymous","S41L E141T",2
"lib1","SARS-CoV-2","TGGTGATACTAATAAA",1,17.17,6.16,-4.6,1.03,1.5,1.23,0.04,">1 nonsynonymous","A89T D90Y D97Y G172W",4
"lib1","SARS-CoV-2","TGGTGATTATTTACCT",8,53.63,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V65F R124Q F134M C150K",4
"lib1","SARS-CoV-2","TGGTGCACAATTCGGT",1,54.74,6.28,-4.48,0.61,1.5,1.17,0.02,">1 nonsynonymous","G86C R136S",2
"lib1","SARS-CoV-2","TGGTGCATATGTTTAA",5,46.78,10.02,-0.74,0.1,2.3,1.05,0.01,"1 nonsynonymous","F12Y",1
"lib1","SARS-CoV-2","TGGTGCATTCACAAAG",8,75.02,10.69,-0.08,0.07,2.89,1.04,0,">1 nonsynonymous","L60K Q84K",2
"lib1","SARS-CoV-2","TGGTGCCGAATCAGGG",3,32.98,7.83,-2.93,0.28,1.5,1.06,0.02,"1 nonsynonymous","Y159L",1
"lib1","SARS-CoV-2","TGGTGCGTCCACACCG",3,10.72,10.06,-0.71,0.21,2.26,1,0.01,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","TGGTGCTATATTTCGC",1,1.71,NA,NA,NA,NA,NA,NA,"stop","P133* I142V",2
"lib1","SARS-CoV-2","TGGTGGCGTCTTAGAT",4,8.25,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A33V D34S T55F P96W C158F",5
"lib1","SARS-CoV-2","TGGTGGGCATTCAGTA",1,20.3,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K94P W106P P149G L188R",4
"lib1","SARS-CoV-2","TGGTGGGTTCTATCTA",3,100.91,10.72,-0.05,0.04,2.95,1.02,0,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","TGGTGGTTATATTTAT",6,29.03,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41Y K128S F167G",3
"lib1","SARS-CoV-2","TGGTGTAATCACGAAT",3,70.98,10.83,0.06,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTGTATAGAATCCT",3,53.14,8.98,-1.79,0.09,2.93,1.07,0,">1 nonsynonymous","L5S Y119C",2
"lib1","SARS-CoV-2","TGGTGTCGTATTTCCT",2,71.44,9.89,-0.87,0.08,2.12,1.02,0,">1 nonsynonymous","I2R T63L P133K",3
"lib1","SARS-CoV-2","TGGTGTGGGATACCAT",4,38.22,9.32,-1.44,0.16,1.69,1.19,0.01,">1 nonsynonymous","Y39N T46C D98I",3
"lib1","SARS-CoV-2","TGGTGTGTATTAGCGA",2,30.13,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","N40F L57S I88A N118D",4
"lib1","SARS-CoV-2","TGGTGTTATCTATGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S29T V37R N58I F99* L122S S129D A192H",7
"lib1","SARS-CoV-2","TGGTGTTCTACGGAAC",2,1.34,NA,NA,NA,NA,NA,NA,"stop","V37D T55* Y121E S147Q",4
"lib1","SARS-CoV-2","TGGTTAAACGATAATC",2,61.04,6,-4.76,1.58,1.5,1.13,0.01,">1 nonsynonymous","N24L C49V N151T N157I",4
"lib1","SARS-CoV-2","TGGTTAAAGCATTCCA",2,34.22,10.19,-0.58,0.1,2.84,1.08,0,">1 nonsynonymous","C6N T55N",2
"lib1","SARS-CoV-2","TGGTTAAATTACTAAC",7,150.31,6.13,-4.63,0.75,1.5,1.21,0.02,">1 nonsynonymous","G116S C158S",2
"lib1","SARS-CoV-2","TGGTTAAGCGGCTATA",1,5.79,7.2,-3.56,0.51,1.5,1,0.01,">1 nonsynonymous","T85S V103S",2
"lib1","SARS-CoV-2","TGGTTACAAATACTTT",4,18.39,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D90V Y119H E135K I142F",4
"lib1","SARS-CoV-2","TGGTTACAAATGAAAA",1,41.66,10.14,-0.62,0.07,2.92,1,0,">1 nonsynonymous","V37W C61K T100A G174R",4
"lib1","SARS-CoV-2","TGGTTACCGAATGACC",2,29.17,6.92,-3.84,0.24,1.5,1.11,0.01,">1 nonsynonymous","A22F D112M F160N A190E",4
"lib1","SARS-CoV-2","TGGTTACCTAAGTATA",1,17.55,9.38,-1.39,0.25,1.5,1.1,0.03,">1 nonsynonymous","N13G R27L S69Q T201N",4
"lib1","SARS-CoV-2","TGGTTACTATAAATAT",3,31.65,6,-4.76,1.75,1.5,1.21,0.02,">1 nonsynonymous","L5R R16V V77P",3
"lib1","SARS-CoV-2","TGGTTACTCTAAACTC",3,6.95,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","S41A D90K D97N V103N G146V",5
"lib1","SARS-CoV-2","TGGTTAGCAATTTGTC",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I D68L K87N P96L",4
"lib1","SARS-CoV-2","TGGTTAGGTGACTACG",2,28.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33E Q79V I104T",3
"lib1","SARS-CoV-2","TGGTTATAAAAGACCA",2,16.77,6,-4.76,2,1.5,1.23,0.04,"1 nonsynonymous","N92Y",1
"lib1","SARS-CoV-2","TGGTTATAATTAAAAA",3,72.15,9.97,-0.8,0.11,2.21,1.03,0.01,">1 nonsynonymous","L5M S41G F62W A105N",4
"lib1","SARS-CoV-2","TGGTTATATTATGATT",1,36.32,10.64,-0.13,0.05,2.89,1.07,0,">1 nonsynonymous","Y35I S43I",2
"lib1","SARS-CoV-2","TGGTTATCAACACAAA",2,89.68,10.05,-0.71,0.08,2.76,1.01,0,">1 nonsynonymous","N1S L38I F44C",3
"lib1","SARS-CoV-2","TGGTTATTTACGAAAA",1,21.65,10.36,-0.41,0.07,2.97,1,0,"1 nonsynonymous","T15M",1
"lib1","SARS-CoV-2","TGGTTATTTATAAAGA",2,39.19,10.78,0.02,0.08,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTTCAACTACACAC",1,57.62,9.35,-1.41,0.08,2.79,1.11,0,">1 nonsynonymous","A22L Y119H",2
"lib1","SARS-CoV-2","TGGTTCAGATACATAT",9,8.6,NA,NA,NA,NA,NA,NA,"stop","E10F N151Q Q163* T201H",4
"lib1","SARS-CoV-2","TGGTTCCAAATATCAA",4,26.93,6,-4.76,2,3,1.14,0,">1 nonsynonymous","G86N P96S Y123H",3
"lib1","SARS-CoV-2","TGGTTCGAAAAAACCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131G P149H V173K",3
"lib1","SARS-CoV-2","TGGTTCGAGATACGTA",2,33.39,9.31,-1.46,0.09,2.87,1.08,0,">1 nonsynonymous","D97L I142M N157D",3
"lib1","SARS-CoV-2","TGGTTCGATTAAGAAA",2,63.6,10.18,-0.58,0.07,2.77,1.04,0,">1 nonsynonymous","E10A S45R",2
"lib1","SARS-CoV-2","TGGTTCGCCTATCCGC",2,50.89,10.74,-0.02,0.06,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTTCGTCATCATTC",3,29.08,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","A105Y F134W V180G K198P",4
"lib1","SARS-CoV-2","TGGTTCGTTAATATAA",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C Y91G",2
"lib1","SARS-CoV-2","TGGTTGAAATAGTTAC",2,27.65,10.72,-0.04,0.08,2.93,1.05,0,">1 nonsynonymous","P149A S184T",2
"lib1","SARS-CoV-2","TGGTTGAACCAGGCAA",2,44.54,10.37,-0.39,0.06,2.89,1,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TGGTTGATTACCAGCG",9,102.33,6.02,-4.75,1.03,1.5,1.18,0.02,">1 nonsynonymous","F12I Y50V Y143K F160R",4
"lib1","SARS-CoV-2","TGGTTGATTTAAAACA",7,148.31,8.86,-1.9,0.19,1.5,1.09,0.01,"1 nonsynonymous","R25G",1
"lib1","SARS-CoV-2","TGGTTGCAAAGTGAAG",5,43.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T3V D97P C158Y",3
"lib1","SARS-CoV-2","TGGTTGCCAATTATCG",7,87.53,9.78,-0.98,0.1,2.22,1.03,0,">1 nonsynonymous","Y91Q P133A T201L",3
"lib1","SARS-CoV-2","TGGTTGCTATACCACC",6,58.45,10.48,-0.28,0.04,2.93,1.03,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","TGGTTGTGACCCTAGC",7,38.7,6.19,-4.57,0.8,1.5,1.18,0.04,">1 nonsynonymous","G51L C61E P82Y S129K F160H",5
"lib1","SARS-CoV-2","TGGTTGTTGACGTTTG",5,66.88,10.26,-0.5,0.06,2.79,1.1,0,">1 nonsynonymous","F44V D97I",2
"lib1","SARS-CoV-2","TGGTTTAAACCACGCC",1,74.45,8.76,-2,0.11,2.73,1.17,0.01,">1 nonsynonymous","V37Y V52F G117H",3
"lib1","SARS-CoV-2","TGGTTTAACGAGATGC",2,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L S36E",2
"lib1","SARS-CoV-2","TGGTTTACCCACGGAC",2,78.22,9.72,-1.04,0.08,2.67,1.12,0,">1 nonsynonymous","L5F K94R N130H F156N",4
"lib1","SARS-CoV-2","TGGTTTACGCACCTCA",8,6.23,NA,NA,NA,NA,NA,NA,"stop","S43* C61K L95K",3
"lib1","SARS-CoV-2","TGGTTTATGTTATAGA",2,59.79,10.32,-0.45,0.07,2.91,1.03,0,">1 nonsynonymous","F12V L188M",2
"lib1","SARS-CoV-2","TGGTTTCAAAATACAC",7,99.52,10.72,-0.05,0.05,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGGTTTCAAACATCCA",4,41.27,10.57,-0.2,0.05,2.88,1.08,0,">1 nonsynonymous","S43M N171S K198L",3
"lib1","SARS-CoV-2","TGGTTTCAATCACATG",2,59.67,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","S36M Y93E A105K F126D",4
"lib1","SARS-CoV-2","TGGTTTCAATCCGCCC",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R L122I",2
"lib1","SARS-CoV-2","TGGTTTGAAAAGCTAG",2,39.73,10.1,-0.66,0.11,2.42,1.01,0,"1 nonsynonymous","K94G",1
"lib1","SARS-CoV-2","TGGTTTGATAACCCCT",5,9.63,6,-4.76,2,3,1.15,0,">1 nonsynonymous","L5S T55Y A89G G101N L162V",5
"lib1","SARS-CoV-2","TGGTTTGCTATGAGAT",3,106.21,9.65,-1.11,0.04,2.83,1.07,0,">1 nonsynonymous","Q84M Y119N",2
"lib1","SARS-CoV-2","TGGTTTGTAATTGAAT",1,116.83,10.74,-0.02,0.04,2.89,1.05,0,"1 nonsynonymous","F62C",1
"lib1","SARS-CoV-2","TGGTTTGTGTGCGTGT",7,102.6,10.64,-0.13,0.04,2.9,1.03,0,"1 nonsynonymous","C61F",1
"lib1","SARS-CoV-2","TGGTTTTAGAAAATCA",4,68.98,10.68,-0.09,0.04,2.93,1.01,0,"1 nonsynonymous","N110W",1
"lib1","SARS-CoV-2","TGTAAAAAATTGCGAT",6,126.2,9.42,-1.35,0.12,1.69,1.22,0.01,"1 nonsynonymous","I28R",1
"lib1","SARS-CoV-2","TGTAAAAACCGACTTT",7,117.6,10.79,0.03,0.08,2.74,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAAAACTCAAATA",1,23.04,6.46,-4.3,0.2,1.5,1.07,0,">1 nonsynonymous","I2Y G86L Q144G",3
"lib1","SARS-CoV-2","TGTAAAAAGATTTCTG",2,23.32,10.17,-0.59,0.11,2.78,1.06,0.01,"1 nonsynonymous","R136V",1
"lib1","SARS-CoV-2","TGTAAAAATGTTCTGA",5,81.21,8.72,-2.04,0.11,2.99,1.03,0.01,">1 nonsynonymous","I2F Y119Q I142P V173A",4
"lib1","SARS-CoV-2","TGTAAAACAGGTGTCT",3,89.67,9.48,-1.28,0.06,2.75,1.12,0,"1 nonsynonymous","I142E",1
"lib1","SARS-CoV-2","TGTAAAACATGAAAAC",4,48.22,10.55,-0.22,0.04,2.91,1.05,0,"1 nonsynonymous","T170S",1
"lib1","SARS-CoV-2","TGTAAAACCCGCGACA",4,14.85,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7T Y66K D98L N107V",4
"lib1","SARS-CoV-2","TGTAAAACCTCTGTGG",2,6.68,11.13,0.37,0.15,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAAACGATGTAGC",1,21.29,6,-4.76,2,1.5,1.33,0.03,">1 nonsynonymous","V37M P54A K87N V181Y",4
"lib1","SARS-CoV-2","TGTAAAAGGGCTCTTG",1,17.61,9.84,-0.92,0.21,2,1.13,0.03,">1 nonsynonymous","R16V E76K",2
"lib1","SARS-CoV-2","TGTAAAAGTAACACGT",5,9.35,10.1,-0.67,0.06,2.83,1.06,0,">1 nonsynonymous","S41A D97P G155R",3
"lib1","SARS-CoV-2","TGTAAAATAATATCGA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","C6R Y91* W106G Y121* R124H V181N",6
"lib1","SARS-CoV-2","TGTAAAATAGTAACAA",4,22.22,10.03,-0.73,0.09,2.26,1,0,">1 nonsynonymous","E10D A81L",2
"lib1","SARS-CoV-2","TGTAAAATTACAGGCA",1,1.8,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAAATTGTTTAGA",2,112.18,8.66,-2.1,0.09,2.96,1.04,0,">1 nonsynonymous","D59T N157E",2
"lib1","SARS-CoV-2","TGTAAACAAAGTCAAA",17,74.65,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","T3S D90P G116E",3
"lib1","SARS-CoV-2","TGTAAACAAGTTCATG",2,26.88,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","P54H S69Q D90I",3
"lib1","SARS-CoV-2","TGTAAACATATAGTAC",3,38.87,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","C6H N120S F167D",3
"lib1","SARS-CoV-2","TGTAAACCTTTACACG",6,73.85,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","G83F K87A C158P",3
"lib1","SARS-CoV-2","TGTAAACGAACATTTT",5,3.54,NA,NA,NA,NA,NA,NA,"stop","T3S G9N S19T I28* I138D G174T K198H",7
"lib1","SARS-CoV-2","TGTAAACGCTAAGGCA",1,31.62,10.59,-0.18,0.12,2.91,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAACTAATAAATG",1,69.08,10.82,0.05,0.09,2.92,1.03,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","TGTAAACTACTGGACG",3,83.15,10.5,-0.26,0.04,2.94,1.01,0,">1 nonsynonymous","N1F D98E T201M",3
"lib1","SARS-CoV-2","TGTAAACTTCCTCCGT",1,17.78,7.48,-3.29,0.37,1.5,1.16,0.04,">1 nonsynonymous","N4P W23S K56V",3
"lib1","SARS-CoV-2","TGTAAAGACTCTCGAC",10,1.68,NA,NA,NA,NA,NA,NA,"stop","G9P N107I Y143*",3
"lib1","SARS-CoV-2","TGTAAAGCATGATACA",4,123.27,10.6,-0.17,0.02,2.95,1.03,0,">1 nonsynonymous","S41W N58E",2
"lib1","SARS-CoV-2","TGTAAAGCTTACAGGA",1,26.37,6.14,-4.62,0.85,1.5,1.16,0.03,">1 nonsynonymous","N40L V77Q P133A P149H",4
"lib1","SARS-CoV-2","TGTAAATACAATACCG",5,95.42,10.68,-0.09,0.05,2.9,1.04,0,"1 nonsynonymous","S41H",1
"lib1","SARS-CoV-2","TGTAAATACACTCTTA",4,56.97,10.08,-0.68,0.1,2.25,1.03,0,">1 nonsynonymous","T85R R127N",2
"lib1","SARS-CoV-2","TGTAAATAGTCAAAAT",1,21.65,10.45,-0.31,0.06,2.94,1,0,">1 nonsynonymous","D90F N130M V173L S200Y",4
"lib1","SARS-CoV-2","TGTAAATCCACACTGT",3,105.32,9.24,-1.52,0.05,2.86,1.1,0,">1 nonsynonymous","Y39H F47V G166V",3
"lib1","SARS-CoV-2","TGTAAATGCCAATTAT",4,47.61,9.83,-0.94,0.16,1.82,1.09,0.01,">1 nonsynonymous","T3L I80M",2
"lib1","SARS-CoV-2","TGTAAATGCGGTCGAA",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82E W106R F160P",3
"lib1","SARS-CoV-2","TGTAAATGGACTAACT",2,36.51,10.14,-0.62,0.08,2.91,1,0,"1 nonsynonymous","Y143L",1
"lib1","SARS-CoV-2","TGTAAATGGTGACTCC",1,9.64,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5K Y35K K114I D137S",4
"lib1","SARS-CoV-2","TGTAAATTCTTTTCCG",8,38.47,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","K94W D112N",2
"lib1","SARS-CoV-2","TGTAAATTGGGACCCT",2,35.64,10.32,-0.44,0.1,2.54,1,0.01,">1 nonsynonymous","A14Y A33L S139T",3
"lib1","SARS-CoV-2","TGTAACAAAACGTTTT",1,25.12,6,-4.76,2,3,1.14,0,">1 nonsynonymous","N107S Y123N K128C Q176I",4
"lib1","SARS-CoV-2","TGTAACAAACACGACC",3,102.22,10.69,-0.07,0.09,2.84,1.11,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","TGTAACAAATTAGACA",1,26.69,9.19,-1.58,0.18,1.5,1.13,0.01,">1 nonsynonymous","F12S K56R T148H",3
"lib1","SARS-CoV-2","TGTAACAACCCATCGA",9,56.17,10.52,-0.24,0.12,2.93,1.07,0.01,">1 nonsynonymous","E141H P197V",2
"lib1","SARS-CoV-2","TGTAACAAGCAGCTAA",4,34.24,10.19,-0.58,0.09,2.34,1.02,0,">1 nonsynonymous","I2R T63V R136A",3
"lib1","SARS-CoV-2","TGTAACAAGGACGAAT",12,157.23,9.02,-1.75,0.07,2.06,1.11,0,">1 nonsynonymous","P7L F62K T100L T170S K198M",5
"lib1","SARS-CoV-2","TGTAACAATAGAATTG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A33V N120* E141Q S200D",4
"lib1","SARS-CoV-2","TGTAACAATGCTTAGG",5,0.51,NA,NA,NA,NA,NA,NA,"stop","I2F S19Y Y50* V115L Y143D",5
"lib1","SARS-CoV-2","TGTAACACAACACGAT",7,534.97,10.02,-0.75,0.04,2.92,1,0,">1 nonsynonymous","K128L E154V K198L",3
"lib1","SARS-CoV-2","TGTAACACGTACATGC",1,17,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V37R G172M T201N",3
"lib1","SARS-CoV-2","TGTAACACTAGTTTTG",2,104.23,10.61,-0.16,0.05,2.88,1.04,0,">1 nonsynonymous","A89S D97L",2
"lib1","SARS-CoV-2","TGTAACAGCACTTCGA",4,6.98,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I104S V181N",2
"lib1","SARS-CoV-2","TGTAACAGCTAATCAG",16,128.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89P A105L",2
"lib1","SARS-CoV-2","TGTAACCAACAGTGAG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","A18D A89*",2
"lib1","SARS-CoV-2","TGTAACCAGGTCCGTG",17,113.82,7.68,-3.09,0.29,1.5,1.21,0.03,">1 nonsynonymous","L162S Y178F",2
"lib1","SARS-CoV-2","TGTAACCCTTCCACTA",5,33.26,9.81,-0.95,0.06,2.82,1,0,">1 nonsynonymous","F134T G166S",2
"lib1","SARS-CoV-2","TGTAACCGCCCAATAA",1,34.78,10.77,0,0.09,2.9,1.07,0,">1 nonsynonymous","I2C T15E V37F",3
"lib1","SARS-CoV-2","TGTAACCGGGAACAAG",3,66.67,6.18,-4.59,0.81,1.5,1.17,0.03,">1 nonsynonymous","F12P D112V T170K",3
"lib1","SARS-CoV-2","TGTAACCTAAAGGCCC",4,15.21,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S36Q N157F V180G",3
"lib1","SARS-CoV-2","TGTAACGAGATACCAT",2,0.46,NA,NA,NA,NA,NA,NA,"stop","P96D N109K S129P F160*",4
"lib1","SARS-CoV-2","TGTAACGATTCCCGAT",1,164.26,10.77,0.01,0.08,2.91,1.05,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TGTAACGCATTTACAG",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I F62S",2
"lib1","SARS-CoV-2","TGTAACGGGCGACTCC",3,47.38,6.16,-4.6,1.14,1.5,1.23,0.04,">1 nonsynonymous","A14F G83W Y91C L95I",4
"lib1","SARS-CoV-2","TGTAACGGTACTTATT",1,13.05,10.42,-0.34,0.18,2.75,1.11,0.01,">1 nonsynonymous","T3F F126L T140L P197L",4
"lib1","SARS-CoV-2","TGTAACGTAAAAAGCA",8,50.72,10.05,-0.71,0.09,2.7,1.04,0,">1 nonsynonymous","G9A Y121V",2
"lib1","SARS-CoV-2","TGTAACGTATACGTCT",3,27.05,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","F62W G86C Y91W L125P I142M G172R G174L",7
"lib1","SARS-CoV-2","TGTAACGTGACAATTA",17,93.67,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","F12S T55I V65C K87V K114R C158S Q168D G174V",8
"lib1","SARS-CoV-2","TGTAACGTGGGCGTCT",2,17.48,10.73,-0.03,0.1,2.94,1,0.01,"1 nonsynonymous","S129F",1
"lib1","SARS-CoV-2","TGTAACTACCTGATCA",2,8.22,10.2,-0.57,0.11,2.88,1,0,">1 nonsynonymous","Y91V T201L",2
"lib1","SARS-CoV-2","TGTAACTAGAGATGCC",3,40.6,10.72,-0.04,0.1,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAACTATTAAAAAG",1,81.6,10.37,-0.39,0.02,2.95,1,0,">1 nonsynonymous","Y121F S129F",2
"lib1","SARS-CoV-2","TGTAACTCCGCTCGTA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","N107K V153*",2
"lib1","SARS-CoV-2","TGTAACTCGCGGTCTC",3,72.51,10.65,-0.11,0.1,2.94,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTAACTGGTGCCGTA",8,129.07,9.42,-1.35,0.05,2.76,1.07,0,">1 nonsynonymous","T170L V173F",2
"lib1","SARS-CoV-2","TGTAACTTTAACGTAT",8,63.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91P Y119L",2
"lib1","SARS-CoV-2","TGTAAGAAAATCGAAA",13,103.87,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9K A67S S139H R179M",4
"lib1","SARS-CoV-2","TGTAAGAAACCAACCA",5,63.29,10.75,-0.01,0.08,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAGAACATACCGA",1,37.16,10.73,-0.03,0.09,2.86,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTAAGAACTAGTTAC",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q T100C A105L T140N C150D F167G",6
"lib1","SARS-CoV-2","TGTAAGAAGAAAAAGA",4,86.91,10.29,-0.48,0.04,2.88,1.01,0,">1 nonsynonymous","N64Y S129E G152I",3
"lib1","SARS-CoV-2","TGTAAGACCCGCAGAA",4,19.67,6.05,-4.71,1.64,1.5,1.24,0.07,">1 nonsynonymous","G9W R16K Y93V F156I",4
"lib1","SARS-CoV-2","TGTAAGACTGACCCAA",1,12.55,6.25,-4.51,0.98,1.5,1.2,0.05,">1 nonsynonymous","F17M W23S E186G P197N",4
"lib1","SARS-CoV-2","TGTAAGAGATAAAGTA",3,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T N107S F126T",3
"lib1","SARS-CoV-2","TGTAAGAGATAACCTG",4,93.19,10.65,-0.12,0.04,2.95,1.02,0,"1 nonsynonymous","T100Q",1
"lib1","SARS-CoV-2","TGTAAGAGCATTGACC",8,171.71,10.61,-0.15,0.04,2.93,1.04,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TGTAAGAGTTACCTAG",6,1.46,NA,NA,NA,NA,NA,NA,"stop","L5* N118A",2
"lib1","SARS-CoV-2","TGTAAGATCATAAGGC",1,26.69,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K26P S43C K87M G155D",4
"lib1","SARS-CoV-2","TGTAAGCAAAAGTAAT",8,115.06,10.77,0.01,0.05,2.92,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTAAGCAACTGTCAT",2,44.7,6,-4.76,1.52,1.5,1.19,0.02,">1 nonsynonymous","G9W L95G P161L",3
"lib1","SARS-CoV-2","TGTAAGCAATAAAATG",4,56.45,10.76,-0.01,0.04,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAAGCAGAAGACGT",2,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52C G83H G86I Y93L D97N N118Y C158P F167R",8
"lib1","SARS-CoV-2","TGTAAGCAGCCTATAG",3,98.77,10.79,0.03,0.07,2.97,1.01,0,">1 nonsynonymous","V37Q S129D N151S F160Y",4
"lib1","SARS-CoV-2","TGTAAGCATAAGAGAG",1,30.27,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L60K Y93E F99S V115L R127S",5
"lib1","SARS-CoV-2","TGTAAGCCACCTTAAG",5,64.67,6,-4.76,1.6,1.5,1.11,0,">1 nonsynonymous","W23S V65S A105E R124C F134R",5
"lib1","SARS-CoV-2","TGTAAGCGCTGACACT",10,173.25,8.02,-2.75,0.17,1.66,1.16,0.01,"1 nonsynonymous","D112N",1
"lib1","SARS-CoV-2","TGTAAGCTCCAATACT",16,222.84,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G9N F17C V37A G51P D68R N120P P133L A145L",8
"lib1","SARS-CoV-2","TGTAAGCTGAACATAC",5,17.64,7.44,-3.32,0.3,1.85,1.14,0.03,">1 nonsynonymous","R16D A33T G86S N109R",4
"lib1","SARS-CoV-2","TGTAAGCTTATAAACA",8,41.33,6,-4.76,2,3,1.14,0,">1 nonsynonymous","D98L W106V D112G Y119E T140K G146S",6
"lib1","SARS-CoV-2","TGTAAGGACACGCATT",4,42.83,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S53C D68R G86E",3
"lib1","SARS-CoV-2","TGTAAGGACTAGTTAA",3,50.63,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28L G51S I88S",3
"lib1","SARS-CoV-2","TGTAAGGTTAAGCTTT",7,62.15,9.37,-1.39,0.1,1.81,1.13,0.01,"1 nonsynonymous","P82S",1
"lib1","SARS-CoV-2","TGTAAGTACCATTGTG",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V N64T I88G Q168R",4
"lib1","SARS-CoV-2","TGTAAGTATACGGTTG",4,24.44,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","E10I N64L Y175L K198W",4
"lib1","SARS-CoV-2","TGTAAGTGGTGCTACC",1,12.91,7.11,-3.65,0.24,2.09,1.19,0.01,"1 nonsynonymous","C158H",1
"lib1","SARS-CoV-2","TGTAAGTGGTGTGCAT",1,10.63,6,-4.76,1.17,3,1.14,0.01,">1 nonsynonymous","T55H A105E D137S G146M G172E",5
"lib1","SARS-CoV-2","TGTAAGTGTCATGGTG",9,4.73,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib1","SARS-CoV-2","TGTAAGTTCAATAATC",1,22.46,10.15,-0.62,0.12,2.48,1.02,0.01,">1 nonsynonymous","V37C W106F",2
"lib1","SARS-CoV-2","TGTAAGTTCACTTGAA",5,0.81,NA,NA,NA,NA,NA,NA,"stop","N1H K48* K87D S164C",4
"lib1","SARS-CoV-2","TGTAATAAAATTCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5V Y91* Y143C P197R",4
"lib1","SARS-CoV-2","TGTAATAAATCCTCTA",3,64.08,10.59,-0.17,0.07,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAATAATAAGCTGC",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G N40D L122P",3
"lib1","SARS-CoV-2","TGTAATAATTACGATT",17,167.57,10.11,-0.66,0.06,2.64,1.04,0,">1 nonsynonymous","N4I A42Y G116H",3
"lib1","SARS-CoV-2","TGTAATACAAGATGCT",14,136.51,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F8P F62N A89F R136S",4
"lib1","SARS-CoV-2","TGTAATACAGAGTCTA",2,26.57,10.69,-0.08,0.11,3,1,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","TGTAATACCCAACGGC",1,15.07,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A18L Q163E V173T",3
"lib1","SARS-CoV-2","TGTAATACGTGACGAA",8,2.96,NA,NA,NA,NA,NA,NA,"stop","S19* Y50L F62R G155K",4
"lib1","SARS-CoV-2","TGTAATAGGGTGACTA",5,47.53,10.12,-0.65,0.08,2.61,1.11,0,">1 nonsynonymous","Y35E N64Q",2
"lib1","SARS-CoV-2","TGTAATATGCCCCGAG",2,0.21,NA,NA,NA,NA,NA,NA,"stop","P82I L122V Q168* K198E",4
"lib1","SARS-CoV-2","TGTAATATTTCAGGCT",3,80.68,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","I142L C158Y G166A",3
"lib1","SARS-CoV-2","TGTAATCACCGCCCAA",2,33.21,10.34,-0.42,0.09,2.86,1,0,"1 nonsynonymous","S69W",1
"lib1","SARS-CoV-2","TGTAATCATCTCTAAG",5,53.46,9.68,-1.09,0.12,2.08,1.09,0.01,">1 nonsynonymous","Y35A P133M",2
"lib1","SARS-CoV-2","TGTAATCCAATTAATG",6,97.39,10.37,-0.39,0.03,2.89,1.04,0,">1 nonsynonymous","P7L V37D",2
"lib1","SARS-CoV-2","TGTAATCCGAATGAAG",3,29.91,6,-4.76,2,3,1.16,0,">1 nonsynonymous","P96Y Q176R",2
"lib1","SARS-CoV-2","TGTAATCTAATCATAA",2,46.76,10.72,-0.04,0.07,2.89,1.06,0,"1 nonsynonymous","S129P",1
"lib1","SARS-CoV-2","TGTAATCTCAATGGCG",1,24.39,10.49,-0.27,0.16,2.69,1.11,0.02,">1 nonsynonymous","Y178N A192S",2
"lib1","SARS-CoV-2","TGTAATGACGAAATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E Q144F Y175I",3
"lib1","SARS-CoV-2","TGTAATGACGAATACA",5,72.78,10.78,0.02,0.11,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAATGAGGCACGGT",3,6.7,NA,NA,NA,NA,NA,NA,"stop","V20K G83K R127E I138*",4
"lib1","SARS-CoV-2","TGTAATGCTTCAATAA",10,84.66,9.95,-0.82,0.09,2.43,1.11,0,">1 nonsynonymous","D90F E141P",2
"lib1","SARS-CoV-2","TGTAATGGCCCAGGGC",3,12.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5S E10C G51V Y93H C158Y T170L K198Q",7
"lib1","SARS-CoV-2","TGTAATGTACACAGTA",2,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V K87L Y121T G155P P177C",5
"lib1","SARS-CoV-2","TGTAATGTGAAATACC",2,45.26,7.47,-3.29,0.26,1.5,1.04,0.02,">1 nonsynonymous","G9L Y93L",2
"lib1","SARS-CoV-2","TGTAATGTGCGAATAT",2,17.35,8.55,-2.22,0.14,1.67,1.09,0.01,">1 nonsynonymous","I104S E141Y S184Y L188H",4
"lib1","SARS-CoV-2","TGTAATGTGGTTCTTC",4,15.8,6,-4.76,2,1.5,1.21,0.04,"1 nonsynonymous","N92K",1
"lib1","SARS-CoV-2","TGTAATTAAGGAGTCT",4,73.09,8.18,-2.58,0.17,2.09,1.15,0.01,"1 nonsynonymous","Y175K",1
"lib1","SARS-CoV-2","TGTAATTACGACCCAC",2,86.12,10.36,-0.4,0.07,2.83,1.05,0,">1 nonsynonymous","T85P K132E",2
"lib1","SARS-CoV-2","TGTAATTATTGTCAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y K56G",2
"lib1","SARS-CoV-2","TGTAATTCCGCGCAAG",1,33.93,8.52,-2.25,0.12,2.72,1.14,0.01,">1 nonsynonymous","Y66I N157H V173N T201R",4
"lib1","SARS-CoV-2","TGTAATTCTAGTTCGA",1,23.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41W F99L P133Q F160L",4
"lib1","SARS-CoV-2","TGTAATTGACCGTCAA",3,76.01,10.77,0.01,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTAATTTCAAAAAAT",1,23.72,10.64,-0.12,0.06,2.9,1.09,0,"1 nonsynonymous","C61K",1
"lib1","SARS-CoV-2","TGTAATTTCGAACGTG",1,8.57,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G9L Y50I N64F A105S",4
"lib1","SARS-CoV-2","TGTAATTTGGCAAAGG",1,2.46,NA,NA,NA,NA,NA,NA,"stop","K56* N118F L122K G152H",4
"lib1","SARS-CoV-2","TGTAATTTTAGAGAAT",2,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H A67F T85D P96T N120T",5
"lib1","SARS-CoV-2","TGTACAAAACTAAGGC",11,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A Y119Q K128Q T140M",4
"lib1","SARS-CoV-2","TGTACAAACGATTCTG",5,103.61,10.13,-0.63,0.08,2.67,1,0,">1 nonsynonymous","R27S G116H S139R",3
"lib1","SARS-CoV-2","TGTACAAACTCTGATC",1,8.89,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N13R N30L A42Y F62M P96Q Y123S F134L Q144L",8
"lib1","SARS-CoV-2","TGTACAAAGAGGGGCC",1,73.7,10.13,-0.64,0.06,2.8,1.05,0,">1 nonsynonymous","A18T E154D",2
"lib1","SARS-CoV-2","TGTACAACACTAGATA",1,17.71,8.73,-2.04,0.15,2.37,1.17,0.02,"1 nonsynonymous","Y165V",1
"lib1","SARS-CoV-2","TGTACAACAGACATCT",9,138.37,6,-4.76,1.76,1.5,1.19,0.02,"1 nonsynonymous","G101L",1
"lib1","SARS-CoV-2","TGTACAACCAAGATTA",6,131.73,6.24,-4.52,0.62,1.5,1.2,0.02,">1 nonsynonymous","E10K P54R D90S Y175K",4
"lib1","SARS-CoV-2","TGTACAACCTCACAAC",6,111.69,6.09,-4.67,0.87,1.5,1.24,0.01,"1 nonsynonymous","D68L",1
"lib1","SARS-CoV-2","TGTACAAGAACACTCG",8,138.26,10.21,-0.56,0.04,2.86,1.04,0,">1 nonsynonymous","D59R G155N",2
"lib1","SARS-CoV-2","TGTACAAGCACCATTT",12,0.81,NA,NA,NA,NA,NA,NA,"stop","S41* G155L F167P",3
"lib1","SARS-CoV-2","TGTACAAGCTACCAAT",2,27.31,10.26,-0.5,0.04,2.97,1,0,">1 nonsynonymous","A42T Q144V",2
"lib1","SARS-CoV-2","TGTACAAGGACATGAT",7,36.33,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","T63W P96K R136L P149V S184I",5
"lib1","SARS-CoV-2","TGTACAATTATATTGA",6,47.45,10.56,-0.2,0.05,2.95,1,0,">1 nonsynonymous","A18K N120R",2
"lib1","SARS-CoV-2","TGTACAATTCATTAAC",2,45.44,9.56,-1.21,0.1,2.14,1.02,0,">1 nonsynonymous","N107V S129G",2
"lib1","SARS-CoV-2","TGTACACAACTCTAGC",4,25.43,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A105G L131W S139F",3
"lib1","SARS-CoV-2","TGTACACGAAATTGAG",14,164.08,6.53,-4.23,0.38,1.5,1.17,0.01,">1 nonsynonymous","P54L E141V Y159C",3
"lib1","SARS-CoV-2","TGTACACTATAATGGC",2,9.92,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F70R V103F L183A",3
"lib1","SARS-CoV-2","TGTACACTTTCTAAGT",1,28.94,10.78,0.01,0.07,2.97,1.01,0,"1 nonsynonymous","K114V",1
"lib1","SARS-CoV-2","TGTACAGAAAATCACC",2,61.16,10.65,-0.11,0.07,2.92,1.06,0,">1 nonsynonymous","T3M T140A",2
"lib1","SARS-CoV-2","TGTACAGAGAAGCCTA",6,55.97,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T15A S36Q R73T N92Q Y178S T201Y",6
"lib1","SARS-CoV-2","TGTACAGGACACAGGA",2,15.86,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","E76S I80S I142V",3
"lib1","SARS-CoV-2","TGTACAGGACATAAGA",3,20.42,7.34,-3.42,0.49,1.5,1.06,0.08,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","TGTACAGTAGCTGTTG",3,21.1,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","C31R S36R F99T",3
"lib1","SARS-CoV-2","TGTACAGTCCTACCTG",5,55.21,6.39,-4.37,0.78,1.5,1.2,0.04,">1 nonsynonymous","A89V Y93A N157M P177G",4
"lib1","SARS-CoV-2","TGTACATAACCGTAGA",9,8.87,NA,NA,NA,NA,NA,NA,"stop","C49I L60Y P177*",3
"lib1","SARS-CoV-2","TGTACATAATCATCTG",2,4.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58E",1
"lib1","SARS-CoV-2","TGTACATAGAGATTCA",2,38.08,10.69,-0.07,0.06,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTACATATCATTCCC",7,104.82,10.48,-0.29,0.04,2.82,1.01,0,">1 nonsynonymous","P7K Y123L",2
"lib1","SARS-CoV-2","TGTACATATCTTAAAA",2,30.46,8.76,-2,0.21,1.5,1.08,0.02,">1 nonsynonymous","A81S A89Y",2
"lib1","SARS-CoV-2","TGTACATCCAAAATTA",4,101.88,10.65,-0.11,0.04,2.9,1.07,0,">1 nonsynonymous","I2L G9T",2
"lib1","SARS-CoV-2","TGTACATGTTACTATT",4,79.9,9.63,-1.13,0.15,1.78,1.13,0.01,"1 nonsynonymous","V11R",1
"lib1","SARS-CoV-2","TGTACATTTTTGGAAT",2,9.48,6,-4.76,2,3,1.38,0.02,">1 nonsynonymous","V20S W106R S139Q",3
"lib1","SARS-CoV-2","TGTACCAAACCTATCG",1,40,10.75,-0.02,0.12,2.94,1.04,0.01,"1 nonsynonymous","I142V",1
"lib1","SARS-CoV-2","TGTACCAAATGTGAGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148K",1
"lib1","SARS-CoV-2","TGTACCAACACGTCCA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","Y35G T46Q L60F S113G Y119G G166* S200N",7
"lib1","SARS-CoV-2","TGTACCAAGCACTCTA",1,23.8,8.93,-1.83,0.23,1.86,1.11,0.03,">1 nonsynonymous","S69R Y119V",2
"lib1","SARS-CoV-2","TGTACCATACATGTCA",5,21.52,8.79,-1.98,0.2,1.76,1.16,0.04,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TGTACCATCTTCTGGA",2,9.67,8.11,-2.66,0.16,2.04,1.06,0.01,">1 nonsynonymous","L5A G83V A145D",3
"lib1","SARS-CoV-2","TGTACCATGCACGTCC",3,68.23,9.51,-1.26,0.06,2.87,1.1,0,"1 nonsynonymous","Y119G",1
"lib1","SARS-CoV-2","TGTACCCACATTCCTG",6,44.93,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T3K G9V C61T Y123L T148S N157P",6
"lib1","SARS-CoV-2","TGTACCCACTAACTTG",1,21.44,6.05,-4.71,1.21,1.5,1.23,0.03,">1 nonsynonymous","P82M A105W",2
"lib1","SARS-CoV-2","TGTACCCAGATGTCTT",5,53.27,10.84,0.07,0.07,2.96,1.05,0,">1 nonsynonymous","I2P D97L T201L",3
"lib1","SARS-CoV-2","TGTACCCCAAATATGT",5,69.37,6,-4.76,2,3,1.23,0,">1 nonsynonymous","Y35E G51A N92M K114L Y143G",5
"lib1","SARS-CoV-2","TGTACCCGCTCTTGAG",1,33.87,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A33F S45K P161H T170S",4
"lib1","SARS-CoV-2","TGTACCCGGCCTGGAC",4,97.95,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","G9M A89H N107I N120I",4
"lib1","SARS-CoV-2","TGTACCCTACGGATAG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","C6* D34L L38T L122E G155L S200T",6
"lib1","SARS-CoV-2","TGTACCCTGCGTCTGC",12,50.91,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A14L T55V A89T G172A",4
"lib1","SARS-CoV-2","TGTACCGAAAATGACA",6,38.59,10.7,-0.06,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTACCGCAATCTAAA",4,149.25,8.92,-1.84,0.33,1.5,1,0.05,">1 nonsynonymous","V65R E76S A145T N171S T201V",5
"lib1","SARS-CoV-2","TGTACCGGACGAAATG",8,81.95,8.66,-2.11,0.1,2.16,1.08,0,">1 nonsynonymous","T55W F62D S129N Y143M",4
"lib1","SARS-CoV-2","TGTACCGTTTTAAGCT",5,67.91,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","A89H C102V",2
"lib1","SARS-CoV-2","TGTACCTAGGACCCAA",2,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P A33V K87W C150L P177R",5
"lib1","SARS-CoV-2","TGTACCTATCAAGAAT",1,8.84,8.88,-1.88,0.32,1.5,1.12,0.03,">1 nonsynonymous","V11H Y121V",2
"lib1","SARS-CoV-2","TGTACCTGCCCTCTTG",6,16.69,9.75,-1.02,0.17,2.08,1.01,0.01,">1 nonsynonymous","S129L R136H S164Y",3
"lib1","SARS-CoV-2","TGTACGAACGGAACTT",13,117.39,8.13,-2.64,0.15,1.62,1.14,0.01,">1 nonsynonymous","R73I N110H P169I",3
"lib1","SARS-CoV-2","TGTACGAAGTAACGAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","I28V F47L W106K S200*",4
"lib1","SARS-CoV-2","TGTACGATGCCTTTAG",6,64.44,6,-4.76,1.05,1.5,1.13,0.01,">1 nonsynonymous","V11S N58V Y66D L131Q",4
"lib1","SARS-CoV-2","TGTACGCATAGTAATT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","Q84R V115L S129*",3
"lib1","SARS-CoV-2","TGTACGCCATACTATG",1,32.61,8.2,-2.57,0.21,1.5,1.03,0.01,">1 nonsynonymous","K132N Y165T",2
"lib1","SARS-CoV-2","TGTACGCCTTGCGAAA",5,106.48,8.64,-2.12,0.08,2.61,1.1,0,">1 nonsynonymous","L5H A42I N157T",3
"lib1","SARS-CoV-2","TGTACGGATAAGTAAT",3,6.52,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D75R K87R N109S Y123T V153S",5
"lib1","SARS-CoV-2","TGTACGGTTACGTAGG",3,0.98,NA,NA,NA,NA,NA,NA,"stop","L5* K56S E141R F156Q T193I",5
"lib1","SARS-CoV-2","TGTACGTAAAATAAAG",2,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24S L38I G146Y",3
"lib1","SARS-CoV-2","TGTACGTTCTGTTTAA",8,39.61,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V77Q N92R P96T",3
"lib1","SARS-CoV-2","TGTACTAAACAGTGAA",3,31.66,8.78,-1.99,0.11,2.88,1.07,0.01,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","TGTACTAACTCAATAA",4,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K Y66I Q84H C102R",4
"lib1","SARS-CoV-2","TGTACTAATACTAGAT",3,51.26,10.64,-0.12,0.06,2.89,1.08,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TGTACTAATCCTATTG",1,14.2,10.17,-0.59,0.19,2.92,1.07,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TGTACTACAAGACTAC",9,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M P82S D97S W106G T201M",5
"lib1","SARS-CoV-2","TGTACTACTAAAAACT",2,15.99,6,-4.76,2,3,1.06,0,">1 nonsynonymous","N58E Y93A",2
"lib1","SARS-CoV-2","TGTACTAGTAGGCCAT",9,152.23,10.42,-0.34,0.05,2.93,1.03,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","TGTACTATACTTATCC",7,117.52,6.17,-4.59,0.58,1.5,1.14,0.01,"1 nonsynonymous","C158D",1
"lib1","SARS-CoV-2","TGTACTATAGCCACAT",4,101.53,10.82,0.06,0.07,2.92,1,0,">1 nonsynonymous","I2V S36K",2
"lib1","SARS-CoV-2","TGTACTATGTTATCAT",7,225.74,9.72,-1.05,0.05,2.81,1.06,0,">1 nonsynonymous","R27M A145R",2
"lib1","SARS-CoV-2","TGTACTCACGACGAAG",2,5.43,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6F I88L A105T T170S G196K",5
"lib1","SARS-CoV-2","TGTACTCAGGCGGTGA",7,131.78,10.8,0.03,0.05,2.92,1.05,0,">1 nonsynonymous","A18S S43V T201N",3
"lib1","SARS-CoV-2","TGTACTCATCTATTAC",2,33.6,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","C49V C61K A81T K87H N118Y Y123V R127P",7
"lib1","SARS-CoV-2","TGTACTCTGCCGAGCA",1,21.33,10.66,-0.1,0.11,2.93,1,0,">1 nonsynonymous","P7S T55N",2
"lib1","SARS-CoV-2","TGTACTCTTAAGACCA",6,20.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M V103K I138L Q168R",4
"lib1","SARS-CoV-2","TGTACTCTTGGGTTGC",7,31.78,6,-4.76,2,3,1.11,0,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","TGTACTGCAGTGATAA",1,29.4,10.72,-0.04,0.05,2.98,1,0,">1 nonsynonymous","G9D T140D V153A",3
"lib1","SARS-CoV-2","TGTACTGTCGCAGATG",1,19.46,9.88,-0.89,0.32,1.76,1.17,0.03,"1 nonsynonymous","V11D",1
"lib1","SARS-CoV-2","TGTACTTGCATACGAA",7,101.27,10.5,-0.27,0.04,2.95,1,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","TGTACTTTACGCTCGG",6,35.26,7.08,-3.69,0.37,1.5,1.07,0.04,">1 nonsynonymous","G101N N109A",2
"lib1","SARS-CoV-2","TGTACTTTGGAATATG",7,44.6,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","I2E C31E P161R L187Q",4
"lib1","SARS-CoV-2","TGTACTTTGTAAAGAT",3,17.95,7.72,-3.04,0.33,1.5,1.15,0.05,">1 nonsynonymous","I28P C61G",2
"lib1","SARS-CoV-2","TGTAGAAAAGGAAACT",1,33.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40M T55L I80E Y119I G146L",5
"lib1","SARS-CoV-2","TGTAGAAAATATGTTC",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77Q C102S Q144S F167L V182E",5
"lib1","SARS-CoV-2","TGTAGAACAAAATTAA",1,16.6,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","V71E N92L T148S T170V",4
"lib1","SARS-CoV-2","TGTAGACCTAGATCAA",9,43.47,6,-4.76,2,3,1.14,0,">1 nonsynonymous","P82Y A145T N151F",3
"lib1","SARS-CoV-2","TGTAGAGAGCGCCCAT",2,68.72,6.68,-4.09,0.45,1.5,1.09,0.04,">1 nonsynonymous","D98S S147F P177R",3
"lib1","SARS-CoV-2","TGTAGAGAGTGAAACT",11,2.62,NA,NA,NA,NA,NA,NA,"stop","N40L D59A K94V N107L F167*",5
"lib1","SARS-CoV-2","TGTAGATGGAATTCCC",1,6.14,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","W106L R127L C158G T201G",4
"lib1","SARS-CoV-2","TGTAGCTCTCTTAGGC",1,4.64,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TGTAGTAAGTCCGCGT",5,30.45,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V11S T63I Y93T V115L F167N",5
"lib1","SARS-CoV-2","TGTAGTACAGCTATAT",3,46.29,7.22,-3.55,0.19,1.5,1.11,0.01,">1 nonsynonymous","N1K Y121L Y165V",3
"lib1","SARS-CoV-2","TGTATAAAAGACATGG",3,15.78,10.56,-0.2,0.23,2.54,1,0.03,"1 nonsynonymous","A33P",1
"lib1","SARS-CoV-2","TGTATAAACGTATAAA",1,11.67,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","T3S A42G L95F F99W A105C R136Y E141K G152Y V173D T201Y",10
"lib1","SARS-CoV-2","TGTATAAATAGATCTA",2,53.18,9.99,-0.77,0.12,2.15,1.06,0.01,">1 nonsynonymous","Y165F E186S",2
"lib1","SARS-CoV-2","TGTATAAATTAGGTAT",7,96.48,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25A D112L Y119R",3
"lib1","SARS-CoV-2","TGTATAAATTTGACAC",4,0.2,NA,NA,NA,NA,NA,NA,"stop","N4G W23S D34S T85* Y143K",5
"lib1","SARS-CoV-2","TGTATAACCGTTGTAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGTATAAGTAACCAAA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","Y39* S129I",2
"lib1","SARS-CoV-2","TGTATAAGTAGCAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* P7H G9M N157L S184*",5
"lib1","SARS-CoV-2","TGTATAATACAGCCTA",2,43.02,8.78,-1.99,0.07,2.83,1.07,0,">1 nonsynonymous","Y50F V103I Y119W",3
"lib1","SARS-CoV-2","TGTATAATAGAGACCA",6,41.83,10.63,-0.13,0.11,2.84,1.12,0.01,">1 nonsynonymous","D97G K128P",2
"lib1","SARS-CoV-2","TGTATAATAGGCGGCT",2,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R G117V S200L",3
"lib1","SARS-CoV-2","TGTATACAAAAACGAA",2,35.37,10.72,-0.05,0.07,2.87,1.1,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","TGTATACAAGACACTA",1,6.97,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","N1Y R27T K132S C158G",4
"lib1","SARS-CoV-2","TGTATACATGGCCTTG",15,150.5,10.29,-0.48,0.03,2.83,1.01,0,">1 nonsynonymous","K128L F134M S200K",3
"lib1","SARS-CoV-2","TGTATACCAAATTTCC",1,7.9,9.36,-1.4,0.33,2.12,1.19,0.03,">1 nonsynonymous","I2R N13S D97L I104K P133H E141A",6
"lib1","SARS-CoV-2","TGTATACGATGATTCT",3,108.61,8.38,-2.39,0.17,1.74,1.08,0.01,">1 nonsynonymous","A81R L122R G146L F160N S200L",5
"lib1","SARS-CoV-2","TGTATACTAACGTTTC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","I28K S41* C61H I88V A105S E135P",6
"lib1","SARS-CoV-2","TGTATACTAATATAAT",3,89.94,9.57,-1.19,0.11,1.91,1.08,0.01,">1 nonsynonymous","P7L D90Q N107S",3
"lib1","SARS-CoV-2","TGTATACTGAACCATC",5,0.44,NA,NA,NA,NA,NA,NA,"stop","V77* R124Y E141S V173N",4
"lib1","SARS-CoV-2","TGTATAGAAGAACGCG",3,30.2,6,-4.76,2,3,1.22,0,">1 nonsynonymous","N64T P96L I104G N120K T201E",5
"lib1","SARS-CoV-2","TGTATAGCATTACCAA",1,107.6,8.4,-2.37,0.14,2.84,1.03,0.01,">1 nonsynonymous","F44L K87T L122R T148S Y159I",5
"lib1","SARS-CoV-2","TGTATATAAACGCTTA",14,65.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N64P Y91L V103M Y123S T140I N171H",6
"lib1","SARS-CoV-2","TGTATATAAACTGGTA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H W106C P149H",3
"lib1","SARS-CoV-2","TGTATATAAAGTTTTT",4,53.4,10.4,-0.36,0.12,2.73,1.17,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGTATATACAATGTAA",2,24.96,6,-4.76,1.11,2.98,1.07,0,">1 nonsynonymous","N4I T15R Y121C R136N T201R",5
"lib1","SARS-CoV-2","TGTATATAGGTGTATG",6,67.81,10.89,0.12,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTATATAGTTCACCG",3,168.57,10.64,-0.13,0.05,2.89,1.06,0,">1 nonsynonymous","A22N T201H",2
"lib1","SARS-CoV-2","TGTATATCCCTGTGAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114R F160R",2
"lib1","SARS-CoV-2","TGTATATGGCGGATTG",3,31.67,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N92T C102N",2
"lib1","SARS-CoV-2","TGTATCAACTACGTAG",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D Q84M D97G Y159P",4
"lib1","SARS-CoV-2","TGTATCAATTTAGGAA",2,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V V103S E154R",3
"lib1","SARS-CoV-2","TGTATCAGGTTGAGCT",2,1.95,NA,NA,NA,NA,NA,NA,"stop","G74* A81H L111Q T170M",4
"lib1","SARS-CoV-2","TGTATCAGTGATCATT",5,1.61,NA,NA,NA,NA,NA,NA,"stop","F8S F12* P96I N151A",4
"lib1","SARS-CoV-2","TGTATCATCTGAGAAA",3,59.4,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6E V37Y Q176G",3
"lib1","SARS-CoV-2","TGTATCCAAATACTAA",3,1.33,NA,NA,NA,NA,NA,NA,"stop","I142* L162F",2
"lib1","SARS-CoV-2","TGTATCCAACCTGAAC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","G9L V52R D68* P96Y R124V P161V P191*",7
"lib1","SARS-CoV-2","TGTATCCACGTGATGA",2,60.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T C158W",2
"lib1","SARS-CoV-2","TGTATCCAGCGAATTA",3,76.57,10.76,-0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTATCCCGAACAGTT",1,18.65,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R124V E154V",2
"lib1","SARS-CoV-2","TGTATCCCTATACCAG",4,47.95,10.45,-0.31,0.04,2.88,1.08,0,">1 nonsynonymous","G9M P149K",2
"lib1","SARS-CoV-2","TGTATCCGAAAAAATG",4,164.33,10.76,-0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTATCCGACTCAAAA",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120P P149T E154L",3
"lib1","SARS-CoV-2","TGTATCCTTCATATCG",13,66.06,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L60C I88S D97T L122S",4
"lib1","SARS-CoV-2","TGTATCGAAAGAAGAG",2,0.56,NA,NA,NA,NA,NA,NA,"stop","R73S N109I D137*",3
"lib1","SARS-CoV-2","TGTATCGAATTAAACA",2,28.11,9.49,-1.27,0.22,1.96,1.02,0.02,">1 nonsynonymous","K87L W106E",2
"lib1","SARS-CoV-2","TGTATCGAGCATGCCA",3,24.53,6.07,-4.7,0.96,1.5,1.2,0.02,">1 nonsynonymous","T55A K94E Y121L",3
"lib1","SARS-CoV-2","TGTATCGATAAGTGAG",1,5.41,9.77,-1,0.18,2.59,1.04,0.01,">1 nonsynonymous","P7H F8T",2
"lib1","SARS-CoV-2","TGTATCTCAAATCACG",5,90.4,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y39P D90I T100S N107P L125C T148E",6
"lib1","SARS-CoV-2","TGTATGAACAACAATG",4,58.89,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","G9P S43V T63A Y175G",4
"lib1","SARS-CoV-2","TGTATGAAGGGCAGAG",5,122.37,9.05,-1.72,0.12,1.8,1.17,0.01,">1 nonsynonymous","V11S C31H",2
"lib1","SARS-CoV-2","TGTATGACAATCACTC",4,97.8,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y35D V71C T85A G117R R136D T170C P197L",7
"lib1","SARS-CoV-2","TGTATGATACAACCTG",1,72.98,10.43,-0.34,0.09,2.84,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTATGATGACCTCTA",4,74.08,10.71,-0.06,0.06,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTATGATGCATCAGC",3,8.8,6.52,-4.24,0.85,3,1.14,0.01,">1 nonsynonymous","E10F S19A A33L N58H Y91I K128M",6
"lib1","SARS-CoV-2","TGTATGCAGCCTATGT",13,252.6,10.23,-0.53,0.03,2.88,1.02,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","TGTATGCGACGGACTT",3,12.92,10.19,-0.58,0.15,2.68,1.16,0.02,"1 nonsynonymous","C31A",1
"lib1","SARS-CoV-2","TGTATGCGCACGTCTT",12,203.23,8.08,-2.68,0.2,1.51,1.11,0.01,">1 nonsynonymous","G9P D34E Y35G C61L Y119D",5
"lib1","SARS-CoV-2","TGTATGCGTCAGTATC",1,31.3,10.52,-0.25,0.06,2.87,1.03,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","TGTATGCTTAGATAAC",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R L57V N64D D97E V103R R136L V181H",7
"lib1","SARS-CoV-2","TGTATGCTTTGCTGCG",4,44.74,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y143T Y165S",2
"lib1","SARS-CoV-2","TGTATGGAAAGCATCT",2,116.59,10.74,-0.02,0.06,2.88,1.07,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TGTATGGAATGATTTT",7,25.1,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D112I I142H T148P",3
"lib1","SARS-CoV-2","TGTATGGAGAGTGAGC",7,43.5,9.94,-0.83,0.09,2.16,1.07,0,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","TGTATGGCCTCAAGAA",5,80.34,10.65,-0.11,0.06,2.97,1.01,0,"1 nonsynonymous","C61T",1
"lib1","SARS-CoV-2","TGTATGGCGGACCAGG",1,0.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185S",1
"lib1","SARS-CoV-2","TGTATGGCGTGCTGAA",8,114.88,10.24,-0.52,0.04,2.89,1.04,0,">1 nonsynonymous","D97A G116V K198S",3
"lib1","SARS-CoV-2","TGTATGGGAATCTATA",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S F134S P161Y",3
"lib1","SARS-CoV-2","TGTATGGGAATGGAGG",6,144.84,10.67,-0.1,0.05,2.93,1.04,0,">1 nonsynonymous","N64V A192M",2
"lib1","SARS-CoV-2","TGTATGTAAATACGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160Q",1
"lib1","SARS-CoV-2","TGTATGTAATTAGCAA",1,16.89,10.62,-0.14,0.06,2.95,1.04,0,">1 nonsynonymous","L5V A22S K56H",3
"lib1","SARS-CoV-2","TGTATGTCCAGGCCAA",5,93.95,10.77,0,0.07,2.83,1.07,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","TGTATGTGGAATATTA",1,1.37,NA,NA,NA,NA,NA,NA,"stop","N13C S29* Y35T D98G",4
"lib1","SARS-CoV-2","TGTATGTGTGCAAACC",1,6.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41Y R127W",2
"lib1","SARS-CoV-2","TGTATGTTCAACCTAT",7,74,9.93,-0.84,0.06,2.27,1.04,0,">1 nonsynonymous","I104S L122W",2
"lib1","SARS-CoV-2","TGTATGTTGATAGGTA",13,236.33,8.63,-2.13,0.09,2.55,1.09,0,">1 nonsynonymous","V37N A81V G166R",3
"lib1","SARS-CoV-2","TGTATGTTGATATTTA",3,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P T15R G86S",3
"lib1","SARS-CoV-2","TGTATTAAAATAGCTG",1,1.15,NA,NA,NA,NA,NA,NA,"stop","F8* A18S Y66P T100I N107L",5
"lib1","SARS-CoV-2","TGTATTAACCCTAACT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y V77T T85Y I104S",4
"lib1","SARS-CoV-2","TGTATTAACGTGTGAC",7,171.45,7.84,-2.93,0.12,1.8,1.13,0,">1 nonsynonymous","C150S E154S",2
"lib1","SARS-CoV-2","TGTATTAAGAAACCTT",6,114.45,10.14,-0.63,0.06,2.83,1.03,0,">1 nonsynonymous","G116L K128I",2
"lib1","SARS-CoV-2","TGTATTAAGACATTTA",2,8.79,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R27Y D112Y",2
"lib1","SARS-CoV-2","TGTATTAATCACGCCA",3,55.4,9.41,-1.35,0.13,1.65,1.14,0.01,">1 nonsynonymous","R16F K56W R136L T201K",4
"lib1","SARS-CoV-2","TGTATTACATCTATTT",4,142.09,10.37,-0.4,0.05,2.85,1.02,0,"1 nonsynonymous","R136V",1
"lib1","SARS-CoV-2","TGTATTAGCCCAAGAA",5,41.57,9.41,-1.35,0.14,1.6,1.15,0.01,"1 nonsynonymous","N13P",1
"lib1","SARS-CoV-2","TGTATTAGCGCTCTAG",1,1.16,NA,NA,NA,NA,NA,NA,"stop","G51F K56S G86L Y143*",4
"lib1","SARS-CoV-2","TGTATTATCTCACGGT",1,45.85,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L95Y Y121S",2
"lib1","SARS-CoV-2","TGTATTATTCGACAGA",4,63.24,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C49V K56L A67Y Y121N",4
"lib1","SARS-CoV-2","TGTATTCATCTTATGT",4,95.63,10.57,-0.19,0.05,2.86,1.09,0,">1 nonsynonymous","L60K D97S L122F",3
"lib1","SARS-CoV-2","TGTATTCGTCCTGGGA",4,3.05,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib1","SARS-CoV-2","TGTATTCTGTTTCCTT",2,94.93,10.12,-0.65,0.08,2.69,1.03,0,">1 nonsynonymous","G51S N64K",2
"lib1","SARS-CoV-2","TGTATTGAAAACAGTG",1,1.49,NA,NA,NA,NA,NA,NA,"stop","S69* G116R Q144T F156M",4
"lib1","SARS-CoV-2","TGTATTGAACCAAAAG",3,22.99,10.67,-0.1,0.05,2.92,1,0,"1 nonsynonymous","G9M",1
"lib1","SARS-CoV-2","TGTATTTCCGGGGCAC",3,26.16,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A14P G86T",2
"lib1","SARS-CoV-2","TGTATTTGTAAATCCA",6,65.07,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","C49V L60A A81E T100V E141R",5
"lib1","SARS-CoV-2","TGTATTTGTGTTCGCA",5,79.24,10.6,-0.16,0.05,2.95,1,0,"1 nonsynonymous","K128I",1
"lib1","SARS-CoV-2","TGTATTTTAACCTAGG",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K G74R D112V T170Y Y175M L183T",6
"lib1","SARS-CoV-2","TGTATTTTACATCAAG",2,0.99,NA,NA,NA,NA,NA,NA,"stop","C61* G83N N157C",3
"lib1","SARS-CoV-2","TGTATTTTATATGGGG",4,31.97,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","N64T W106P",2
"lib1","SARS-CoV-2","TGTATTTTGCCTCGTT",1,2.99,NA,NA,NA,NA,NA,NA,"stop","A42L Y50D L122* Y178I",4
"lib1","SARS-CoV-2","TGTCAAAACCTTAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G101R R136E E141L E154*",4
"lib1","SARS-CoV-2","TGTCAAAAGACATACT",10,41.56,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N40F A89Q E141S",3
"lib1","SARS-CoV-2","TGTCAAACTTTAACTC",4,107.74,8.38,-2.38,0.15,2.05,1.11,0.01,">1 nonsynonymous","G116Y P161T Q168R",3
"lib1","SARS-CoV-2","TGTCAAAGAAACTAAT",3,11.6,10.71,-0.05,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCAAAGACAAATTT",4,0.48,NA,NA,NA,NA,NA,NA,"stop","K87* V103W L122S",3
"lib1","SARS-CoV-2","TGTCAACAAAAATGAA",11,69.66,6,-4.76,1.64,1.5,1.23,0.02,">1 nonsynonymous","S29R V37K V181Q",3
"lib1","SARS-CoV-2","TGTCAACAAGCATTAA",2,55.4,9.53,-1.24,0.12,1.71,1.11,0,">1 nonsynonymous","C49M T55Y N120K",3
"lib1","SARS-CoV-2","TGTCAACATAATTTAG",4,88.76,9.75,-1.02,0.07,2.35,1.07,0,">1 nonsynonymous","L5V R27I C31S D90R",4
"lib1","SARS-CoV-2","TGTCAACCATATGACA",2,31.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q Y35S P82Q T85K V103T E141T",6
"lib1","SARS-CoV-2","TGTCAACCTAAATATT",4,21.71,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I88W G172S",2
"lib1","SARS-CoV-2","TGTCAACCTTACGCCT",2,54.38,6.06,-4.71,0.42,1.5,1.11,0,">1 nonsynonymous","F47I G86C K132Y",3
"lib1","SARS-CoV-2","TGTCAACTTCTAGTCT",3,26.3,7.12,-3.65,0.37,1.55,1.38,0.05,">1 nonsynonymous","L5S Y21R N58T",3
"lib1","SARS-CoV-2","TGTCAAGAAAAAGAAA",6,34.61,8.66,-2.1,0.14,2.87,1,0.01,">1 nonsynonymous","G9K Y143L F156Q",3
"lib1","SARS-CoV-2","TGTCAAGCTATTTAAC",4,17.69,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","S41K G74I N107Y S113W C158S",5
"lib1","SARS-CoV-2","TGTCAAGTAAAAATAC",6,65.52,10.75,-0.02,0.06,2.88,1.09,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TGTCAAGTCGAAAAGC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","S45G C49*",2
"lib1","SARS-CoV-2","TGTCAAGTGCCCCGAA",11,285.05,8.54,-2.22,0.1,2.48,1.06,0,">1 nonsynonymous","N64S Q176T",2
"lib1","SARS-CoV-2","TGTCAAGTTCAATGCA",4,50.92,10.77,0.01,0.05,2.95,1.01,0,">1 nonsynonymous","Q84R T201W",2
"lib1","SARS-CoV-2","TGTCAATATGAAACGA",3,20.58,7.2,-3.57,0.37,1.5,1,0.04,">1 nonsynonymous","C6L I28R R136W I142Y E154N Y165S",6
"lib1","SARS-CoV-2","TGTCAATCGCCTACAA",2,36.6,9.61,-1.15,0.16,1.88,1.12,0.01,">1 nonsynonymous","W106V G146A",2
"lib1","SARS-CoV-2","TGTCAATCGCGCTGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Q79S S139G S147* G172L",4
"lib1","SARS-CoV-2","TGTCAATTATCTCTAA",8,235.49,10.75,-0.01,0.05,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCAATTTTCCATCA",8,9.08,8.92,-1.84,0.43,1.5,1.08,0.07,">1 nonsynonymous","S139L E186F",2
"lib1","SARS-CoV-2","TGTCACAAACGTTGAA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","F44Y V77M D98* W106N",4
"lib1","SARS-CoV-2","TGTCACAATGGGTCGA",4,99.41,6.03,-4.74,0.89,1.5,1.19,0.02,">1 nonsynonymous","A18S W23M I88M Y121W F134R K199R",6
"lib1","SARS-CoV-2","TGTCACACCATAAACT",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S S129M V181M H189N S200H",5
"lib1","SARS-CoV-2","TGTCACACTGCTAGGA",7,2.83,NA,NA,NA,NA,NA,NA,"stop","L5F I28F S43V C49S N157A Q176*",6
"lib1","SARS-CoV-2","TGTCACACTTTTCCCA",1,9.49,6.49,-4.27,1.16,3,1.14,0.02,">1 nonsynonymous","I104P G155N T201N",3
"lib1","SARS-CoV-2","TGTCACAGGATGCTTG",6,142.79,10.14,-0.63,0.08,2.63,1.02,0,">1 nonsynonymous","L60D V65T",2
"lib1","SARS-CoV-2","TGTCACAGGTTCTTCA",2,54.96,9.51,-1.25,0.14,2.08,1.12,0.01,">1 nonsynonymous","C6L D90A",2
"lib1","SARS-CoV-2","TGTCACATTTTTAAGC",4,11.43,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","S19F D34K D137Y S147C",4
"lib1","SARS-CoV-2","TGTCACCAAAGCCTGA",10,115.2,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","P7G L95R N120S S129K",4
"lib1","SARS-CoV-2","TGTCACCAGAAATGAA",11,73.55,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","Y50P",1
"lib1","SARS-CoV-2","TGTCACCATAGACGTC",4,22.72,7.61,-3.15,0.45,1.5,1.02,0.07,">1 nonsynonymous","L95Q D98N F160H",3
"lib1","SARS-CoV-2","TGTCACCGTCCCGAAT",10,141.04,6,-4.76,1.06,1.5,1.18,0.01,">1 nonsynonymous","Y35L L57S F70W P82Q G174V",5
"lib1","SARS-CoV-2","TGTCACGAACAACAAT",1,79.55,6,-4.76,1.16,1.5,1.13,0.01,">1 nonsynonymous","N1K F99L G172E",3
"lib1","SARS-CoV-2","TGTCACGCATGTGTGC",4,66.14,10.58,-0.18,0.04,2.9,1.06,0,">1 nonsynonymous","D98S S147R",2
"lib1","SARS-CoV-2","TGTCACGGAGTATCAA",4,19.01,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N1D I88A N130Q E141G",4
"lib1","SARS-CoV-2","TGTCACTAAATACATT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44* V77C N92C P169V",4
"lib1","SARS-CoV-2","TGTCACTGCATTTGGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32A S129K F185I",3
"lib1","SARS-CoV-2","TGTCACTTAAGTCATT",4,6,NA,NA,NA,NA,NA,NA,"stop","C6E I28* Y119V N171S",4
"lib1","SARS-CoV-2","TGTCAGAAAGCTGAAT",2,12.5,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","T63Q G86Q G101L K128G",4
"lib1","SARS-CoV-2","TGTCAGAAGCACCAAA",2,10.84,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C31E I88N N110H",3
"lib1","SARS-CoV-2","TGTCAGAATAAATGAA",3,66.12,10.09,-0.67,0.11,2.37,1.07,0,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","TGTCAGAATTGACTGG",3,6.26,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","F44L Y159E Q176M",3
"lib1","SARS-CoV-2","TGTCAGACAAGCATAA",8,30.84,7.89,-2.88,0.22,1.5,1.05,0.02,">1 nonsynonymous","G9P S19V S36R S147T P197A",5
"lib1","SARS-CoV-2","TGTCAGACACGAGATA",1,35.18,10.66,-0.11,0.08,2.89,1.09,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","TGTCAGACGACTAATA",2,35.25,10.73,-0.04,0.07,2.92,1.05,0,"1 nonsynonymous","D59T",1
"lib1","SARS-CoV-2","TGTCAGACGCTAATTA",1,22.88,6,-4.76,1.74,3,1.23,0.01,">1 nonsynonymous","L5N G9Y F99C G146K N151F G155D",6
"lib1","SARS-CoV-2","TGTCAGATTTACTCAG",3,0.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73G",1
"lib1","SARS-CoV-2","TGTCAGCCTTATGTAA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","C61* N118* Y178P",3
"lib1","SARS-CoV-2","TGTCAGCGCCCAATAT",4,0.93,NA,NA,NA,NA,NA,NA,"stop","Y119M F167*",2
"lib1","SARS-CoV-2","TGTCAGCTGATTATAA",3,60.67,10.74,-0.03,0.07,2.85,1.09,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","TGTCAGGTACCCGAAG",11,159.51,8.57,-2.19,0.12,2.16,1.11,0,">1 nonsynonymous","G83D G174V",2
"lib1","SARS-CoV-2","TGTCAGGTTACCACCA",2,981.91,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","C61M F156N N171K",3
"lib1","SARS-CoV-2","TGTCAGTACAAGAGCG",2,22.3,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","V32Q V103T L131W P149G F156S",5
"lib1","SARS-CoV-2","TGTCAGTATATAGTCA",2,84.18,10.42,-0.34,0.06,2.94,1,0,">1 nonsynonymous","N58S G83S",2
"lib1","SARS-CoV-2","TGTCAGTTGGCAAATA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","R78W A89D T100* S139V T201*",5
"lib1","SARS-CoV-2","TGTCATAAATGGCTTT",2,11.02,10.62,-0.14,0.07,2.91,1.04,0,">1 nonsynonymous","A18P L57F N120S",3
"lib1","SARS-CoV-2","TGTCATAACACAATGA",15,203.58,9.91,-0.85,0.09,1.95,1.08,0,">1 nonsynonymous","T15L K48Q F134R",3
"lib1","SARS-CoV-2","TGTCATAACCCTTATA",4,88.44,10.78,0.01,0.07,2.95,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTCATAAGCATACTA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","I2L S19R R27* G83F T148P Q176H P197S",7
"lib1","SARS-CoV-2","TGTCATACCGCATTAG",6,103.95,10.66,-0.11,0.06,2.92,1.02,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","TGTCATACTAAAGGGA",6,119.18,6.01,-4.76,0.62,1.5,1.15,0.01,">1 nonsynonymous","T55W D90Y D112E Q144D",4
"lib1","SARS-CoV-2","TGTCATACTCCTCGAA",3,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M K114F",2
"lib1","SARS-CoV-2","TGTCATAGGAATAAAA",5,25.92,6,-4.76,1.66,1.5,1.23,0.02,">1 nonsynonymous","N24F D97L R127W",3
"lib1","SARS-CoV-2","TGTCATATAACTACAT",1,0.42,NA,NA,NA,NA,NA,NA,"stop","C6N S108* Q176S",3
"lib1","SARS-CoV-2","TGTCATATTACCATAC",3,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98Q E141I Q168P",3
"lib1","SARS-CoV-2","TGTCATCAGAAAGTCT",1,69.89,10.61,-0.15,0.03,2.9,1.04,0,"1 nonsynonymous","A42Y",1
"lib1","SARS-CoV-2","TGTCATCTATTCCGAT",7,6.36,NA,NA,NA,NA,NA,NA,"stop","S29* G51V V77M I88L T100L L122E A192T",7
"lib1","SARS-CoV-2","TGTCATCTGTTTCAAG",3,39.91,10.56,-0.21,0.07,2.93,1.03,0,">1 nonsynonymous","C61G K114R",2
"lib1","SARS-CoV-2","TGTCATGAAAGATCCA",2,150.28,10.77,0,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCATGGAATTTACA",9,144.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C31L K87T A105R L131M",4
"lib1","SARS-CoV-2","TGTCATTGACCATGAA",6,98.01,10.88,0.11,0.07,2.87,1.08,0,">1 nonsynonymous","L122K T201Y",2
"lib1","SARS-CoV-2","TGTCATTTAAGGTATG",1,39.72,10.76,-0.01,0.06,2.95,1.02,0,"1 nonsynonymous","N151F",1
"lib1","SARS-CoV-2","TGTCCAAAACCGCTGG",10,70.91,8.29,-2.47,0.25,1.5,1.12,0.02,">1 nonsynonymous","G83E W106V",2
"lib1","SARS-CoV-2","TGTCCAAACTGTCTAT",5,80.02,9.97,-0.8,0.05,2.49,1,0,">1 nonsynonymous","F44I R136C",2
"lib1","SARS-CoV-2","TGTCCAAAGCCGTTCA",1,40.33,8.06,-2.7,0.19,2.15,1.1,0.01,">1 nonsynonymous","W106V Y119D",2
"lib1","SARS-CoV-2","TGTCCAAATGACTAAT",3,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N13M G74D",3
"lib1","SARS-CoV-2","TGTCCAATTTATCTAC",4,84.89,9.22,-1.54,0.16,1.71,1.11,0.01,">1 nonsynonymous","K128L D137S S184T",3
"lib1","SARS-CoV-2","TGTCCACAAAATCATG",6,145.88,9.75,-1.01,0.1,2.39,1.08,0,">1 nonsynonymous","L57A R78C K114F",3
"lib1","SARS-CoV-2","TGTCCACGACTAGAAA",1,9.43,6.83,-3.93,0.2,2.22,1.06,0.01,">1 nonsynonymous","T100F C150T",2
"lib1","SARS-CoV-2","TGTCCACTAATTGTGC",7,112.92,10.11,-0.66,0.1,2.49,1.04,0,"1 nonsynonymous","V52R",1
"lib1","SARS-CoV-2","TGTCCACTGCAGCTGT",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121S S184G",2
"lib1","SARS-CoV-2","TGTCCAGATAAGATTA",3,19.86,10.66,-0.1,0.07,2.84,1.07,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","TGTCCAGCTAAAAATT",2,31.19,10.78,0.02,0.09,2.9,1.07,0,">1 nonsynonymous","K48Q N120S",2
"lib1","SARS-CoV-2","TGTCCATACGCGCTCA",4,46.52,9.03,-1.73,0.1,2.76,1.14,0,">1 nonsynonymous","Y35V I142S",2
"lib1","SARS-CoV-2","TGTCCATATAAGATGT",4,112.84,10.62,-0.14,0.03,2.89,1.02,0,"1 nonsynonymous","Q144H",1
"lib1","SARS-CoV-2","TGTCCATCGCATAACA",1,45.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N40F W106K G166T",3
"lib1","SARS-CoV-2","TGTCCATGATGACCAA",2,16.77,10.15,-0.62,0.1,2.58,1.05,0,"1 nonsynonymous","A81N",1
"lib1","SARS-CoV-2","TGTCCCAACAACGGAG",4,0.37,NA,NA,NA,NA,NA,NA,"stop","T63* P169V",2
"lib1","SARS-CoV-2","TGTCCCACACGGGGTT",3,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S A22R D97Q P149H",4
"lib1","SARS-CoV-2","TGTCCCAGACCGTTAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180Y",1
"lib1","SARS-CoV-2","TGTCCCATCTCAAACA",1,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P A81N T170S",3
"lib1","SARS-CoV-2","TGTCCCATTAGACACT",2,41.99,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44L V52L G86V I138H",4
"lib1","SARS-CoV-2","TGTCCCCAACGATGTT",5,42.23,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S41G L95S T100C P149L",4
"lib1","SARS-CoV-2","TGTCCCCTATCCAAGG",1,0.77,NA,NA,NA,NA,NA,NA,"stop","N171C L188Q T201*",3
"lib1","SARS-CoV-2","TGTCCCGCTGTGCGAG",6,105.89,10.47,-0.29,0.06,2.91,1.01,0,">1 nonsynonymous","R78T D90L A190T",3
"lib1","SARS-CoV-2","TGTCCCGTAGAACTTC",3,21.77,10,-0.76,0.08,2.92,1.05,0.01,">1 nonsynonymous","T3V N30H F126H",3
"lib1","SARS-CoV-2","TGTCCCGTATGTCTAT",1,41.68,10.62,-0.14,0.07,2.9,1.02,0,">1 nonsynonymous","T63R G116E",2
"lib1","SARS-CoV-2","TGTCCCGTCTTATTAA",7,166.03,8.02,-2.75,0.22,1.53,1.18,0.02,">1 nonsynonymous","I2E L60A A105T Y143T",4
"lib1","SARS-CoV-2","TGTCCCGTTATGATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D68Q F156* S184A",3
"lib1","SARS-CoV-2","TGTCCCTAGTTGCGAG",1,14.14,9.31,-1.45,0.18,1.82,1.18,0.01,">1 nonsynonymous","W23S K132L",2
"lib1","SARS-CoV-2","TGTCCCTATACATAGC",3,43.93,10.3,-0.46,0.07,2.68,1,0,">1 nonsynonymous","T15D A33Y T55L Q84R E154G",5
"lib1","SARS-CoV-2","TGTCCCTGGCTCCAAG",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F T100M",2
"lib1","SARS-CoV-2","TGTCCCTGGGCGAGTA",8,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A R124H",2
"lib1","SARS-CoV-2","TGTCCCTTGAGTTAAG",1,62.9,10.33,-0.43,0.06,2.86,1.05,0,">1 nonsynonymous","V11L L60T",2
"lib1","SARS-CoV-2","TGTCCGAAACACAACC",2,0.7,NA,NA,NA,NA,NA,NA,"stop","V65L F99*",2
"lib1","SARS-CoV-2","TGTCCGAGACGCAAAC",5,35.81,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62H D68R K87Q T201A",4
"lib1","SARS-CoV-2","TGTCCGAGATCACAAT",5,92.49,10.81,0.04,0.07,2.93,1.04,0,">1 nonsynonymous","G9C P197M",2
"lib1","SARS-CoV-2","TGTCCGCCATAATTCT",3,71.32,10.8,0.03,0.05,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCCGGATAAGAACC",1,5.36,10.77,0,0.09,2.99,1.04,0,"1 nonsynonymous","S129I",1
"lib1","SARS-CoV-2","TGTCCGTCACTTATTA",1,11.57,10.27,-0.49,0.26,2.64,1.05,0.02,">1 nonsynonymous","S36L N58S N64V",3
"lib1","SARS-CoV-2","TGTCCGTTATGAGAAG",12,1.58,NA,NA,NA,NA,NA,NA,"stop","F8* A192P",2
"lib1","SARS-CoV-2","TGTCCTAAACCAATAT",2,9.46,6,-4.76,1.52,1.5,1.02,0.01,">1 nonsynonymous","C61I I72R F134G I142L",4
"lib1","SARS-CoV-2","TGTCCTAATAAAAAAA",1,10.81,10.55,-0.22,0.07,2.87,1,0,">1 nonsynonymous","G9P S45Q D90N",3
"lib1","SARS-CoV-2","TGTCCTAATCGTAAAC",9,138.18,8.69,-2.07,0.09,2.2,1.11,0,">1 nonsynonymous","T63I D112E K114T",3
"lib1","SARS-CoV-2","TGTCCTACCGTATTTT",6,94.27,10.82,0.06,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCCTATATATCTAC",5,57.3,9.96,-0.81,0.12,1.85,1.06,0,">1 nonsynonymous","T15A W106R",2
"lib1","SARS-CoV-2","TGTCCTATGACCATCG",3,46.6,10.63,-0.13,0.07,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCCTATGGCTAAAT",3,7.32,10.1,-0.67,0.14,2.22,1.01,0.01,">1 nonsynonymous","A14S C61F G155R L187H",4
"lib1","SARS-CoV-2","TGTCCTCACCGCTAGC",2,11.85,10.66,-0.1,0.11,2.91,1.05,0,"1 nonsynonymous","S184A",1
"lib1","SARS-CoV-2","TGTCCTGAATTTGTGT",2,40.88,10.53,-0.23,0.07,2.81,1.12,0,"1 nonsynonymous","S129C",1
"lib1","SARS-CoV-2","TGTCCTGCAAAGAAAA",2,36.34,9.98,-0.79,0.1,2.03,1.02,0,">1 nonsynonymous","T63P D98K N109I",3
"lib1","SARS-CoV-2","TGTCCTGCCAACTGGC",3,25.66,9.86,-0.9,0.16,1.85,1.06,0.01,">1 nonsynonymous","T55F T63V D90V",3
"lib1","SARS-CoV-2","TGTCCTGCTAATTGAA",1,37.61,6,-4.76,1.76,1.5,1.26,0.03,">1 nonsynonymous","N120L G146P G155L",3
"lib1","SARS-CoV-2","TGTCCTTCGTTAAACC",2,11.33,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2V E10T I88D N171H",4
"lib1","SARS-CoV-2","TGTCGAAAAGGGGCTA",10,101.91,6.08,-4.69,0.69,1.5,1.18,0.01,">1 nonsynonymous","F99K A105R",2
"lib1","SARS-CoV-2","TGTCGAAACAAAGTGG",5,124.25,10.16,-0.6,0.04,2.89,1.03,0,">1 nonsynonymous","K87S V103I T201S",3
"lib1","SARS-CoV-2","TGTCGAAATACGATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44S I88S P149*",3
"lib1","SARS-CoV-2","TGTCGAAATCTTTATA",5,212.1,9.63,-1.13,0.04,2.85,1.06,0,">1 nonsynonymous","D98G Y119K",2
"lib1","SARS-CoV-2","TGTCGAAATGTCAACT",2,17.76,6,-4.76,2,3,1.31,0.01,"1 nonsynonymous","N92I",1
"lib1","SARS-CoV-2","TGTCGAACCGACATTC",3,22.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3E S45P C158Y K199Q",4
"lib1","SARS-CoV-2","TGTCGAACGAACGAAG",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44A A81R F99P P161W",4
"lib1","SARS-CoV-2","TGTCGAACGATAAATT",3,0,NA,NA,NA,NA,NA,NA,"stop","V11S D59L C61* S129L",4
"lib1","SARS-CoV-2","TGTCGAAGAGCTATCT",4,3.16,NA,NA,NA,NA,NA,NA,"stop","A14D Y21* S129K Q144* G166L",5
"lib1","SARS-CoV-2","TGTCGACAAGCGGTTA",11,143.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","S41V E141P P177M T201W",4
"lib1","SARS-CoV-2","TGTCGACTAAGGATAC",9,62.46,8.91,-1.86,0.28,1.5,1.1,0.03,">1 nonsynonymous","A22M V77K",2
"lib1","SARS-CoV-2","TGTCGACTGAAATTCA",6,40.79,10.65,-0.12,0.08,2.84,1.13,0,">1 nonsynonymous","Y39D P54F",2
"lib1","SARS-CoV-2","TGTCGACTGAGAAAAC",5,97.39,10.71,-0.06,0.06,2.88,1.03,0,"1 nonsynonymous","N151S",1
"lib1","SARS-CoV-2","TGTCGATATCATTCGA",5,69.99,10.69,-0.07,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCGATTTAGGAATT",2,93.65,10.71,-0.05,0.06,2.87,1.03,0,">1 nonsynonymous","N1V E141S",2
"lib1","SARS-CoV-2","TGTCGCAAAGATTTGT",6,130.78,10.69,-0.07,0.08,2.82,1.06,0,">1 nonsynonymous","T55A T201V",2
"lib1","SARS-CoV-2","TGTCGCAATAGCATGC",4,0,NA,NA,NA,NA,NA,NA,"stop","C6* I80P D112F D137Y F167K T201S",6
"lib1","SARS-CoV-2","TGTCGCACAGGGAGAT",8,74.8,10.19,-0.58,0.11,2.54,1,0,"1 nonsynonymous","F185T",1
"lib1","SARS-CoV-2","TGTCGCAGTGAACAAA",2,10.81,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","S41V N92H P169L V182M",4
"lib1","SARS-CoV-2","TGTCGCCAAGATGCTT",3,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K K48N",2
"lib1","SARS-CoV-2","TGTCGCGATAAGGACG",1,17.43,6.24,-4.53,0.38,3,1.14,0.01,">1 nonsynonymous","L60K I88H",2
"lib1","SARS-CoV-2","TGTCGCTAATAAACAA",10,85.83,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","N13P L125P E135P",3
"lib1","SARS-CoV-2","TGTCGCTAGAACGGAC",4,25.29,6,-4.76,1.62,3,1.16,0.01,">1 nonsynonymous","K48Q K94R N107Y I138G",4
"lib1","SARS-CoV-2","TGTCGCTTTCAGGTAC",7,22.06,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","R16K S41L T55Q C61G A89C T100G D137G",7
"lib1","SARS-CoV-2","TGTCGGAGCACTGAAT",1,66.92,8.97,-1.79,0.07,2.82,1.09,0,">1 nonsynonymous","K56L A145Y",2
"lib1","SARS-CoV-2","TGTCGGATAACTGTAC",2,98.27,10.69,-0.07,0.11,2.76,1.2,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","TGTCGGATTACTATAT",3,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H V71A V115L N130M",4
"lib1","SARS-CoV-2","TGTCGGATTTGAAGCG",15,90.74,9.9,-0.86,0.07,2.02,1.04,0,">1 nonsynonymous","R16F L57Q T85N",3
"lib1","SARS-CoV-2","TGTCGGCCACGACACG",15,54.74,9.68,-1.08,0.42,1.5,1,0.08,">1 nonsynonymous","T3G F17Q A33S A67R",4
"lib1","SARS-CoV-2","TGTCGGGAATTCAGTC",5,180.92,10.82,0.05,0.06,2.9,1.07,0,"1 nonsynonymous","T85R",1
"lib1","SARS-CoV-2","TGTCGGGACAAATTTA",1,24.28,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F8T N40G I72D Y93T W106K R124Y",6
"lib1","SARS-CoV-2","TGTCGTACAGCGGCGC",5,213.59,9.85,-0.91,0.07,2.55,1.06,0,">1 nonsynonymous","C6N S36N I138C",3
"lib1","SARS-CoV-2","TGTCGTACCAACCTCG",3,6.85,8.81,-1.96,0.13,2.87,1.22,0.01,">1 nonsynonymous","V32A L125A Q163K T201S",4
"lib1","SARS-CoV-2","TGTCGTACTCATAACG",7,1.66,NA,NA,NA,NA,NA,NA,"stop","A14H I88W W106A L122*",4
"lib1","SARS-CoV-2","TGTCGTAGCATACCAT",4,32.82,9.81,-0.96,0.18,2.19,1.02,0.02,">1 nonsynonymous","G9L S45Y L60R",3
"lib1","SARS-CoV-2","TGTCGTATGCGTAAGC",11,138.21,10.74,-0.03,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCGTATTTTTTATG",3,47.72,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","L60V Q176F",2
"lib1","SARS-CoV-2","TGTCGTCACGCCAATG",6,56.74,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V77E N92K",2
"lib1","SARS-CoV-2","TGTCGTCCCTCAAACA",2,39.72,10.7,-0.06,0.05,2.91,1.02,0,">1 nonsynonymous","P54R A81S",2
"lib1","SARS-CoV-2","TGTCGTCTTAATTTGA",2,10.79,9.85,-0.91,0.2,2.2,1.19,0.01,">1 nonsynonymous","A42V F47S",2
"lib1","SARS-CoV-2","TGTCGTTCAAACATAT",5,139.72,8.89,-1.87,0.23,1.78,1.15,0.02,">1 nonsynonymous","D98R Q176L S200P",3
"lib1","SARS-CoV-2","TGTCGTTTATCAGACT",5,37.61,6.96,-3.8,0.56,1.5,1.02,0.07,">1 nonsynonymous","T15R D34I V37M D68W Q176R",5
"lib1","SARS-CoV-2","TGTCTAAAAAAGCCCT",7,86.07,10.7,-0.06,0.07,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCTAAAAATCCTTT",6,1.25,NA,NA,NA,NA,NA,NA,"stop","N4Y I88R D97P L122H L131* S139W",6
"lib1","SARS-CoV-2","TGTCTAACATACAAAC",3,34.46,9.94,-0.83,0.09,1.98,1.14,0,"1 nonsynonymous","V180A",1
"lib1","SARS-CoV-2","TGTCTAAGCTCGATAA",8,79.43,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L5I R16C T85N A89V N120R N157F",6
"lib1","SARS-CoV-2","TGTCTAATCTTGATAT",2,42.6,10.26,-0.51,0.07,2.97,1.01,0,">1 nonsynonymous","F8I S36L S43Y",3
"lib1","SARS-CoV-2","TGTCTACAATGCCCAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","S36R S41L R136*",3
"lib1","SARS-CoV-2","TGTCTACACATCAAAG",2,29.71,8.32,-2.44,0.26,1.5,1.23,0.02,"1 nonsynonymous","K94E",1
"lib1","SARS-CoV-2","TGTCTACATCAATTAC",11,55.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50N P96T F134S K198R",4
"lib1","SARS-CoV-2","TGTCTACCTTTTTTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G V71W G86D",3
"lib1","SARS-CoV-2","TGTCTACGATTGAACC",3,21,8.19,-2.57,0.29,1.5,1,0.03,">1 nonsynonymous","T85S S129L V173Q F185E",4
"lib1","SARS-CoV-2","TGTCTACTAAGATTTG",10,54.87,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S29H L57T S69K",3
"lib1","SARS-CoV-2","TGTCTAGACACAAAAG",1,13.26,10.14,-0.62,0.13,2.85,1,0.01,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","TGTCTAGGCGGACGAT",4,540.51,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","Y39T Q144L P161W",3
"lib1","SARS-CoV-2","TGTCTAGGCGTTACAT",3,15.93,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I80H V103W",2
"lib1","SARS-CoV-2","TGTCTATATCATTATA",3,81.42,8.42,-2.35,0.1,2.54,1.06,0,">1 nonsynonymous","A89S I142P G166M",3
"lib1","SARS-CoV-2","TGTCTATATTAGCCAC",5,135.4,10.26,-0.5,0.06,2.85,1,0,">1 nonsynonymous","S41G I138G",2
"lib1","SARS-CoV-2","TGTCTATCAATATGAT",7,44.15,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5T Y50S Y91S W106L Q168R",5
"lib1","SARS-CoV-2","TGTCTATGATGGTTCA",1,6.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53R G152I",2
"lib1","SARS-CoV-2","TGTCTCAGCGGCTTAT",1,28.82,9.29,-1.47,0.14,2.6,1.15,0.01,">1 nonsynonymous","N1D T100W N171L K199I",4
"lib1","SARS-CoV-2","TGTCTCATAACTCAAT",5,53.27,6,-4.76,1.37,1.5,1.18,0.02,">1 nonsynonymous","S19K F47Y K56V G83R D98M N110G",6
"lib1","SARS-CoV-2","TGTCTCCAAAGAGAGA",3,86.43,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","G9W D34G C61K K94P G155N",5
"lib1","SARS-CoV-2","TGTCTCCACCATACTA",2,61.81,10.31,-0.45,0.07,2.79,1,0,">1 nonsynonymous","T3Q A33Y D97L G174T",4
"lib1","SARS-CoV-2","TGTCTCCAGTCAATCT",3,29.01,10.73,-0.04,0.08,2.84,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCTCCATCACAAGG",9,105.12,9.93,-0.83,0.04,2.83,1.03,0,">1 nonsynonymous","C6G S45N",2
"lib1","SARS-CoV-2","TGTCTCCGCCTAATTC",5,139.71,7.19,-3.57,0.34,1.5,1.09,0.03,">1 nonsynonymous","N4K T55G P82E T140Q Y178H",5
"lib1","SARS-CoV-2","TGTCTCCGTCTCAATT",1,24.71,10.7,-0.06,0.08,2.81,1.15,0,"1 nonsynonymous","N130F",1
"lib1","SARS-CoV-2","TGTCTCCTTGCGGGGT",2,14.3,10.2,-0.56,0.14,2.48,1.23,0.01,"1 nonsynonymous","G166S",1
"lib1","SARS-CoV-2","TGTCTCGCAGGGACCA",6,83.63,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55P C61L S69R D97F L122G N151S F156K Y178W",8
"lib1","SARS-CoV-2","TGTCTCGGTAATAAAG",1,18.22,10.62,-0.15,0.16,2.84,1.04,0.01,">1 nonsynonymous","L60K D97S",2
"lib1","SARS-CoV-2","TGTCTCGTCATTCAAC",7,58,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","T46R S53N Y165G",3
"lib1","SARS-CoV-2","TGTCTCTAGCCCACAG",2,34.34,10.1,-0.66,0.08,2.76,1.02,0,">1 nonsynonymous","L5N A14R T55C",3
"lib1","SARS-CoV-2","TGTCTGAAAGGCACCC",6,0.67,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib1","SARS-CoV-2","TGTCTGAATAACCACT",5,43.35,8.56,-2.21,0.22,1.79,1.14,0.02,">1 nonsynonymous","I2K K56L R73I K198E",4
"lib1","SARS-CoV-2","TGTCTGAATTCATGAA",4,28.74,7.09,-3.67,0.41,1.5,1.08,0.07,">1 nonsynonymous","I88K D90G W106S",3
"lib1","SARS-CoV-2","TGTCTGACCGCTAATG",9,1.63,NA,NA,NA,NA,NA,NA,"stop","N130* Y159K",2
"lib1","SARS-CoV-2","TGTCTGCACGAATCTT",2,120.43,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","P133V C158A",2
"lib1","SARS-CoV-2","TGTCTGCAGTCAAGGT",15,337.63,9.63,-1.13,0.06,2.82,1.05,0,">1 nonsynonymous","N109S S129Q",2
"lib1","SARS-CoV-2","TGTCTGTTTGACTTAC",5,0.18,NA,NA,NA,NA,NA,NA,"stop","V11A T46* D90N C102S",4
"lib1","SARS-CoV-2","TGTCTTAAAGTTTCTA",1,14.51,10.36,-0.41,0.07,2.95,1.06,0,">1 nonsynonymous","I2T D98G K132L T201C",4
"lib1","SARS-CoV-2","TGTCTTAGTATAATGC",4,16.87,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","Y91V P96N P133H",3
"lib1","SARS-CoV-2","TGTCTTATATTAACAG",3,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V A89R T140W",3
"lib1","SARS-CoV-2","TGTCTTCAAATTGGGG",4,17.68,6.07,-4.69,0.66,1.5,1.2,0.01,">1 nonsynonymous","N13I D97Q A105Y",3
"lib1","SARS-CoV-2","TGTCTTCACAAAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8R I104N P133*",3
"lib1","SARS-CoV-2","TGTCTTCAGATAATCG",7,77.2,6,-4.76,0.73,1.5,1.13,0.01,">1 nonsynonymous","V11R W23S N64D G146A",4
"lib1","SARS-CoV-2","TGTCTTCAGGCCGGAC",2,27.23,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","Y93T",1
"lib1","SARS-CoV-2","TGTCTTCCAATATTTA",3,9.37,8.24,-2.52,0.33,1.5,1.11,0.04,">1 nonsynonymous","S19T A81T",2
"lib1","SARS-CoV-2","TGTCTTCCGTCCGAGT",5,137.7,10.76,-0.01,0.09,2.91,1.05,0,"1 nonsynonymous","N151Q",1
"lib1","SARS-CoV-2","TGTCTTGACGGGATTT",6,174.27,10.04,-0.73,0.05,2.87,1.02,0,">1 nonsynonymous","F62I Y175H",2
"lib1","SARS-CoV-2","TGTCTTGTCCACATAA",1,21.28,10.71,-0.06,0.09,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTCTTTACACGTTAA",3,20.92,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","A81T F99T K128E F156V",4
"lib1","SARS-CoV-2","TGTCTTTGGAAACTAG",5,60.27,10.72,-0.04,0.06,2.97,1,0,">1 nonsynonymous","L5R T140H",2
"lib1","SARS-CoV-2","TGTCTTTTAGCTGCTA",3,59,10.48,-0.29,0.06,2.82,1.05,0,">1 nonsynonymous","A42F A81E",2
"lib1","SARS-CoV-2","TGTGAAAAACAAACTT",3,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y66V",1
"lib1","SARS-CoV-2","TGTGAAAAACAGCGAA",4,43.33,9.68,-1.08,0.06,1.88,1.12,0,">1 nonsynonymous","A14I V65W",2
"lib1","SARS-CoV-2","TGTGAAAAAGTACCGT",1,21.04,10.83,0.07,0.06,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTGAAACCTTCTCTT",10,67.99,10.73,-0.04,0.07,2.85,1.1,0,">1 nonsynonymous","S43R L122F G152N",3
"lib1","SARS-CoV-2","TGTGAAAGAAAAGAAG",9,301.23,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I2S R25T A42E F44G P177A",5
"lib1","SARS-CoV-2","TGTGAAAGGGTTTTCA",1,6.92,6.79,-3.97,0.51,1.5,1.23,0.03,">1 nonsynonymous","N13F P96I",2
"lib1","SARS-CoV-2","TGTGAAATTTAATTGT",4,47.55,10.75,-0.01,0.07,2.83,1.05,0,">1 nonsynonymous","Y39K E141A",2
"lib1","SARS-CoV-2","TGTGAAATTTCTTGGA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib1","SARS-CoV-2","TGTGAACACGCAATAA",1,9.11,9.88,-0.88,0.27,1.5,1.1,0.02,">1 nonsynonymous","R16D P82L",2
"lib1","SARS-CoV-2","TGTGAACCCATGGGTG",1,7.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V K94N I104A K132S C150W",5
"lib1","SARS-CoV-2","TGTGAACTAAGCGACT",2,19.84,7.14,-3.63,0.31,1.5,1.11,0.02,">1 nonsynonymous","P54H D90M D97L P161A S200N",5
"lib1","SARS-CoV-2","TGTGAACTCCTATTTT",2,57.82,10.92,0.16,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTGAAGACTACGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A18E T46L A81* G101L T170P Y178*",6
"lib1","SARS-CoV-2","TGTGAAGATCCCCCAT",3,39.86,10.67,-0.09,0.09,2.76,1.11,0,"1 nonsynonymous","L5T",1
"lib1","SARS-CoV-2","TGTGAAGGATCTGACA",1,37.93,10.29,-0.47,0.08,2.71,1.01,0,">1 nonsynonymous","N13H F44L",2
"lib1","SARS-CoV-2","TGTGAAGGGGTCTAAT",4,6.9,6,-4.76,2,3,1.02,0,">1 nonsynonymous","S19V L122P S129Y Y159T",4
"lib1","SARS-CoV-2","TGTGAAGTCTCAACCG",5,41.49,9.84,-0.93,0.05,2.82,1.11,0,">1 nonsynonymous","G155R G174R",2
"lib1","SARS-CoV-2","TGTGAATAAAGGTCGA",5,29.19,10.84,0.08,0.08,2.96,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTGAATGACGATGTT",9,2.02,NA,NA,NA,NA,NA,NA,"stop","L95* Y121G N130F P149T",4
"lib1","SARS-CoV-2","TGTGACAAAAATCAAC",7,44.61,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","S19V I72F",2
"lib1","SARS-CoV-2","TGTGACAACATGGAAT",4,132.87,9.01,-1.75,0.09,2.42,1.08,0,">1 nonsynonymous","N4I G146R T201S",3
"lib1","SARS-CoV-2","TGTGACAATAAGTAGT",1,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103A D112Y",2
"lib1","SARS-CoV-2","TGTGACAATCCCAACC",1,6.33,8.45,-2.31,0.28,2.34,1.02,0.03,">1 nonsynonymous","N64T D90E N118L",3
"lib1","SARS-CoV-2","TGTGACAATTTCCCCC",8,5.41,NA,NA,NA,NA,NA,NA,"stop","F17I N64* G83M Q176R",4
"lib1","SARS-CoV-2","TGTGACACAGGGCGCA",12,5.35,9.56,-1.2,0.25,2.76,1.02,0.01,">1 nonsynonymous","E10V T140L N157C",3
"lib1","SARS-CoV-2","TGTGACATTTAAACAA",1,25.43,10.87,0.1,0.11,2.88,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTGACCAATACAATA",7,1.72,NA,NA,NA,NA,NA,NA,"stop","T3L R16T W23* L38H T148W",5
"lib1","SARS-CoV-2","TGTGACCACAACTAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35V K87A T100S N130Q C150K Q163*",6
"lib1","SARS-CoV-2","TGTGACCAGATTCAGA",13,344.56,10,-0.77,0.06,2.26,1.04,0,">1 nonsynonymous","Y39L C61G Y123W L131V",4
"lib1","SARS-CoV-2","TGTGACCGTTTTCCAT",4,129.45,9.82,-0.94,0.04,2.77,1.03,0,">1 nonsynonymous","N64F I88V T100I F156M",4
"lib1","SARS-CoV-2","TGTGACCTCCACAGGA",4,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103T D112V Y121V",3
"lib1","SARS-CoV-2","TGTGACGCCTAACGGA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","K48Y Q84* G117D L125V T148P",5
"lib1","SARS-CoV-2","TGTGACGCTGTCCTAT",5,89.76,6,-4.76,1.05,1.5,1.09,0.01,">1 nonsynonymous","T15V F156H G172A",3
"lib1","SARS-CoV-2","TGTGACGGAAAACACA",3,35.21,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36G L95P R124H F185V",4
"lib1","SARS-CoV-2","TGTGACGGCAATCCCT",7,36.92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C6S R73V D112V G146F",4
"lib1","SARS-CoV-2","TGTGACGTTACGAGCA",2,17.4,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S36V S45K G51N I138Q C150V K198S",6
"lib1","SARS-CoV-2","TGTGACTAAAATTAAT",1,3.72,NA,NA,NA,NA,NA,NA,"stop","L57* C61Y N107V G146H L162F",5
"lib1","SARS-CoV-2","TGTGACTAGCTGATTA",2,83.84,10.66,-0.11,0.05,2.94,1,0,">1 nonsynonymous","N4Q I138A",2
"lib1","SARS-CoV-2","TGTGACTATCCTTTGA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C A42M K48S G86V Y123W",5
"lib1","SARS-CoV-2","TGTGACTTAGACGTAA",6,200.62,10.54,-0.23,0.04,2.91,1.04,0,"1 nonsynonymous","F44G",1
"lib1","SARS-CoV-2","TGTGACTTTTAAGATG",9,180.05,10.75,-0.01,0.08,2.86,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTGAGAAACAGCTTA",1,15,7.44,-3.33,0.37,1.5,1.07,0.04,">1 nonsynonymous","Y119R R136N Q168L",3
"lib1","SARS-CoV-2","TGTGAGAAATTACGTT",1,12.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15S Y119W Q168T R179S",4
"lib1","SARS-CoV-2","TGTGAGACATCCTTAG",1,13.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56H G101P E141H",3
"lib1","SARS-CoV-2","TGTGAGATCCAGTGCT",8,57.44,6,-4.76,1.77,1.5,1.1,0.01,">1 nonsynonymous","L5T R25C N118S",3
"lib1","SARS-CoV-2","TGTGAGCGCGCTTAAA",4,13.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84G D90Y W106D K132S",4
"lib1","SARS-CoV-2","TGTGAGCTATTCAAAA",2,27.07,10.66,-0.11,0.09,2.99,1,0,"1 nonsynonymous","E10L",1
"lib1","SARS-CoV-2","TGTGAGGATTGGCGAC",6,40.22,10.74,-0.02,0.07,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTGAGGATTTAGATA",6,27.43,6.94,-3.82,0.28,1.5,1.21,0.02,">1 nonsynonymous","L60M V71K W106K S113H",4
"lib1","SARS-CoV-2","TGTGAGTAAAGAAACA",1,3.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TGTGAGTAAAGTTACT",7,153.26,9.14,-1.63,0.06,2.78,1.11,0,">1 nonsynonymous","D90L Y119P",2
"lib1","SARS-CoV-2","TGTGATAAAGCTTTTA",7,85.28,10.63,-0.14,0.02,2.96,1,0,">1 nonsynonymous","F44H D90A L122R",3
"lib1","SARS-CoV-2","TGTGATAATCCAATGC",5,82.49,6.38,-4.38,0.77,1.5,1.17,0.04,">1 nonsynonymous","F134W L162P R179Y L187Y",4
"lib1","SARS-CoV-2","TGTGATACTAAGATAC",1,114.74,10.65,-0.11,0.04,2.97,1,0,"1 nonsynonymous","G83A",1
"lib1","SARS-CoV-2","TGTGATACTTTGATGT",3,24.07,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","C49N K128I E135M L162C",4
"lib1","SARS-CoV-2","TGTGATAGACATAACT",4,22.57,6.01,-4.75,1.34,1.5,1.12,0.02,">1 nonsynonymous","K56L T63V G83R R124S T201S",5
"lib1","SARS-CoV-2","TGTGATATTGAATCCC",7,38.63,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N64Q G86V N171R",3
"lib1","SARS-CoV-2","TGTGATCAACCGAAAT",4,25.26,7.64,-3.12,0.23,1.5,1.05,0.01,">1 nonsynonymous","Y91T D98V",2
"lib1","SARS-CoV-2","TGTGATCTATATAACC",4,37.43,6,-4.76,2,3,1.17,0,">1 nonsynonymous","L5R W106D Y175L",3
"lib1","SARS-CoV-2","TGTGATGAATAAGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V103L R127* V194I",3
"lib1","SARS-CoV-2","TGTGATGTAGCGTCCA",8,41.02,6,-4.76,2,1.5,1.23,0.02,"1 nonsynonymous","I80T",1
"lib1","SARS-CoV-2","TGTGATTATAATTATT",14,3.32,NA,NA,NA,NA,NA,NA,"stop","T3M C6A N92R L122*",4
"lib1","SARS-CoV-2","TGTGATTCACTAGTAA",7,170.98,7.33,-3.44,0.16,1.5,1.11,0.01,">1 nonsynonymous","T100L I104C V115K Y175L",4
"lib1","SARS-CoV-2","TGTGATTGATGATATA",2,14.31,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","I88Y W106V",2
"lib1","SARS-CoV-2","TGTGATTTGAGCAGCT",4,89.53,10.03,-0.73,0.11,1.94,1.08,0,">1 nonsynonymous","L95C S129G A190R",3
"lib1","SARS-CoV-2","TGTGCAAAGCCCCCAA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","Y119Q F185*",2
"lib1","SARS-CoV-2","TGTGCAATAGCAATTA",4,20.12,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","T3N S113T D137S",3
"lib1","SARS-CoV-2","TGTGCAATGATTGATA",11,67.41,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","E135P I142F C150H N157I",4
"lib1","SARS-CoV-2","TGTGCAATGTCATACC",13,2.67,NA,NA,NA,NA,NA,NA,"stop","C31T Y35* F99L",3
"lib1","SARS-CoV-2","TGTGCACGGCATATGC",4,11.7,10.47,-0.3,0.07,2.95,1,0,">1 nonsynonymous","S53H K87R T100I A190S",4
"lib1","SARS-CoV-2","TGTGCACGTCTAATAT",3,112.1,10.65,-0.11,0.06,2.96,1,0,">1 nonsynonymous","L5M V52T F62Y T201P",4
"lib1","SARS-CoV-2","TGTGCACTACCATGAT",2,48.27,8.99,-1.78,0.25,1.5,1.13,0.03,">1 nonsynonymous","F8D Y35N T201K",3
"lib1","SARS-CoV-2","TGTGCATAAATCATCT",6,122.53,7.54,-3.23,0.13,1.5,1.1,0,">1 nonsynonymous","I28L P133D P149Q G166L",4
"lib1","SARS-CoV-2","TGTGCCACAAGCCCGT",2,2.01,NA,NA,NA,NA,NA,NA,"stop","Y21I V37* I80S W106R F126E F160Y Y175F",7
"lib1","SARS-CoV-2","TGTGCCATAATTCTCC",3,21.42,6,-4.76,2,3,1.08,0,">1 nonsynonymous","N130W Y175T",2
"lib1","SARS-CoV-2","TGTGCCATGGGTTAAC",1,25.98,10.77,0.01,0.08,2.99,1.01,0,"1 nonsynonymous","G83H",1
"lib1","SARS-CoV-2","TGTGCCCCAATGTTTA",5,44.54,10.67,-0.09,0.04,2.93,1.03,0,">1 nonsynonymous","S29N S41F",2
"lib1","SARS-CoV-2","TGTGCCCCACTAATAA",13,153.15,6,-4.76,1.88,1.5,1.25,0.02,">1 nonsynonymous","R27E Y50D N151Q",3
"lib1","SARS-CoV-2","TGTGCCCGAAAAAGGA",4,32.05,6,-4.76,1.08,1.5,1.16,0.02,">1 nonsynonymous","C49N P82G K94S G174L",4
"lib1","SARS-CoV-2","TGTGCCTCTAGATCTT",6,254.65,8.56,-2.21,0.1,2.91,1.04,0,">1 nonsynonymous","N157K K199L",2
"lib1","SARS-CoV-2","TGTGCGAAAGTTAGTG",1,6.42,9.96,-0.8,0.36,2.28,1.02,0.02,">1 nonsynonymous","T15N Y21V L111R",3
"lib1","SARS-CoV-2","TGTGCGCAAAAAATAA",4,28.89,9.09,-1.68,0.18,1.8,1.19,0.02,">1 nonsynonymous","F62L A89P D98C N151L",4
"lib1","SARS-CoV-2","TGTGCGCAGTATTCTC",3,31.27,10.72,-0.04,0.07,2.84,1.09,0,"1 nonsynonymous","N64M",1
"lib1","SARS-CoV-2","TGTGCGGAAAAACAAG",3,14.72,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","R25S S69D",2
"lib1","SARS-CoV-2","TGTGCGTGCTTAAAAA",3,133.89,10.75,-0.01,0.08,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTGCTACAATGCAAA",1,7.16,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","R16L S45W G172A",3
"lib1","SARS-CoV-2","TGTGCTACAGAGACAA",4,64.74,9.49,-1.28,0.08,2.8,1.11,0,">1 nonsynonymous","G9T N171G",2
"lib1","SARS-CoV-2","TGTGCTACTTTGTAAA",3,18.29,6,-4.76,2,3,1.09,0,">1 nonsynonymous","D98V V103T Y143G",3
"lib1","SARS-CoV-2","TGTGCTAGTCTTTTAG",6,1.69,NA,NA,NA,NA,NA,NA,"stop","E10* C49V L60S",3
"lib1","SARS-CoV-2","TGTGCTATATGCGGGT",5,1.74,NA,NA,NA,NA,NA,NA,"stop","N58M K87A Y91*",3
"lib1","SARS-CoV-2","TGTGCTCAGAGCAAAG",3,12.45,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","K26L G101D",2
"lib1","SARS-CoV-2","TGTGCTCCCTAGCGAT",2,12.8,10.77,0,0.09,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTGCTCCTATGTATA",6,85.53,9.71,-1.05,0.24,1.5,1,0.03,">1 nonsynonymous","D98S E141Y S184P",3
"lib1","SARS-CoV-2","TGTGCTCTAAGCAGCA",5,46.55,6.18,-4.58,0.61,1.5,1.2,0.02,">1 nonsynonymous","V32R S41P F99V",3
"lib1","SARS-CoV-2","TGTGCTGACTTTTTTT",8,112.21,7.08,-3.68,0.3,1.5,1.12,0.02,">1 nonsynonymous","S41R T46I Q79H V115L T140G F156M",6
"lib1","SARS-CoV-2","TGTGCTGATAATTAAT",2,2.29,NA,NA,NA,NA,NA,NA,"stop","G86F S113*",2
"lib1","SARS-CoV-2","TGTGCTGTAACTTGTG",6,69.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A81F F99V",2
"lib1","SARS-CoV-2","TGTGCTGTTATCAGGT",6,88.37,9.79,-0.98,0.05,2.77,1.09,0,">1 nonsynonymous","Y123S F156S",2
"lib1","SARS-CoV-2","TGTGCTTCTTTGCAAA",9,113.6,10.11,-0.65,0.06,2.51,1.02,0,">1 nonsynonymous","N4I E10T",2
"lib1","SARS-CoV-2","TGTGCTTGAACAATTT",1,7.38,6.24,-4.53,2,1.5,1.1,0.05,"1 nonsynonymous","R124G",1
"lib1","SARS-CoV-2","TGTGGAAGATAATAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66S Y93V C150L C158L T201*",5
"lib1","SARS-CoV-2","TGTGGAAGATTCTCAG",2,27.94,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C31L Y93G T100N",3
"lib1","SARS-CoV-2","TGTGGAATATATATAA",12,220.33,10.71,-0.05,0.04,2.86,1.05,0,"1 nonsynonymous","N120S",1
"lib1","SARS-CoV-2","TGTGGACTGGATCACA",4,0.12,NA,NA,NA,NA,NA,NA,"stop","I88A Y123* P149K",3
"lib1","SARS-CoV-2","TGTGGAGAATAACAAC",1,21.76,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","Y35N T63A G86S T100A Y119R",5
"lib1","SARS-CoV-2","TGTGGATAAGATCTAG",1,5.14,6.21,-4.55,1.06,3,1,0,">1 nonsynonymous","T3R F8R N40Y L95Y",4
"lib1","SARS-CoV-2","TGTGGATTACTGGCCC",9,3.08,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib1","SARS-CoV-2","TGTGGCAAATTCGGTA",8,121.54,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C6F N92F P96Q L162S",4
"lib1","SARS-CoV-2","TGTGGCAAGCAGCCTT",2,8.34,7.03,-3.74,0.1,1.89,1.05,0,">1 nonsynonymous","I72M Q84A N107A G174A",4
"lib1","SARS-CoV-2","TGTGGCAGCGGTACGT",2,20.7,9.69,-1.08,0.08,2.1,1.06,0,">1 nonsynonymous","L38T T55S T148D T201V",4
"lib1","SARS-CoV-2","TGTGGCCCTCCAGGCG",1,31.84,10.53,-0.23,0.05,2.94,1,0,"1 nonsynonymous","A18C",1
"lib1","SARS-CoV-2","TGTGGCGATGCTGGAA",10,163.58,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","E10K K48N V52M L162S",4
"lib1","SARS-CoV-2","TGTGGCGTGCTTTGTC",2,80.76,8.78,-1.98,0.15,1.89,1.2,0.01,">1 nonsynonymous","S36A Y66V G83F D98V G166A",5
"lib1","SARS-CoV-2","TGTGGCTATCCACCAT",1,0.72,NA,NA,NA,NA,NA,NA,"stop","V32Q F47D P54E A81* A105N W106L L125P D137* T201Q",9
"lib1","SARS-CoV-2","TGTGGGAACCGAAATC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N13S S43T V77F L95I",5
"lib1","SARS-CoV-2","TGTGGGAGTCCTGATA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","T55* P161L",2
"lib1","SARS-CoV-2","TGTGGGCACCCGCCTT",1,18.99,6,-4.76,1.67,1.5,1.16,0.01,">1 nonsynonymous","C31N S43T C61G G83T I142H",5
"lib1","SARS-CoV-2","TGTGGGCAGGATTAAA",16,99.99,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G86D R127H S139E",3
"lib1","SARS-CoV-2","TGTGGGCCGCAGTTCT",5,56.66,7,-3.76,0.4,1.5,1.16,0.04,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","TGTGGGCTTATAATTG",5,118.31,10.73,-0.04,0.08,2.9,1.03,0,">1 nonsynonymous","P149L H189A",2
"lib1","SARS-CoV-2","TGTGGGCTTGTTTAAA",3,12.81,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","V180K",1
"lib1","SARS-CoV-2","TGTGGGGTAGGTAATT",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G A33N S45F Q84V W106V V153L K199Q",7
"lib1","SARS-CoV-2","TGTGGGTAAGGCAGCC",5,57.65,10.69,-0.07,0.07,2.85,1.13,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","TGTGGGTAGTAATTCA",3,7.7,8.54,-2.23,0.24,1.5,1.15,0.03,">1 nonsynonymous","T3C V52T A81T",3
"lib1","SARS-CoV-2","TGTGGTAAGATTTTGT",7,109.99,10.04,-0.73,0.05,2.59,1.07,0,">1 nonsynonymous","P7Q K56W A105S",3
"lib1","SARS-CoV-2","TGTGGTACGATCAAAT",10,111.03,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S41P Y50M W106K K128S",4
"lib1","SARS-CoV-2","TGTGGTATGCTGCGCG",11,1.22,NA,NA,NA,NA,NA,NA,"stop","N40A D97N I104* G116S",4
"lib1","SARS-CoV-2","TGTGGTCAAAAAACTG",6,46.24,9.96,-0.8,0.1,1.92,1.06,0,"1 nonsynonymous","P82K",1
"lib1","SARS-CoV-2","TGTGGTCGTACACGTG",6,71.4,10.89,0.13,0.08,2.91,1.03,0,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","TGTGGTCTCAAGGAAT",2,16.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T N92L",2
"lib1","SARS-CoV-2","TGTGGTGCCCCAAAGG",12,236.78,10.61,-0.15,0.05,2.9,1.02,0,"1 nonsynonymous","N40Y",1
"lib1","SARS-CoV-2","TGTGGTTGGATAAGCG",6,2.29,NA,NA,NA,NA,NA,NA,"stop","S45V D90* E135T I142T",4
"lib1","SARS-CoV-2","TGTGGTTTTCCACAAT",1,10.28,9.61,-1.15,0.18,2.27,1.14,0.01,">1 nonsynonymous","W106R G174S",2
"lib1","SARS-CoV-2","TGTGTAAAGTAGAAAA",2,14.06,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","R73G I88L K94N I104T S129V",5
"lib1","SARS-CoV-2","TGTGTAACCTGACCCG",3,47.13,9.94,-0.83,0.13,2.07,1.08,0.01,">1 nonsynonymous","F17A Y39W T148K",3
"lib1","SARS-CoV-2","TGTGTACAACCGCTAC",2,35.1,7.36,-3.4,0.43,1.5,1.03,0.05,">1 nonsynonymous","N40C D112N G166L",3
"lib1","SARS-CoV-2","TGTGTCAATAGTTTAA",3,11.42,6,-4.76,1.09,3,1.13,0.01,">1 nonsynonymous","V37T G86S S113R A145D V194I",5
"lib1","SARS-CoV-2","TGTGTCACGAATCTAA",2,0.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157Y",1
"lib1","SARS-CoV-2","TGTGTCATAGAGTTCT",4,42.8,10.76,0,0.06,2.95,1.01,0,"1 nonsynonymous","A190L",1
"lib1","SARS-CoV-2","TGTGTCATGCGAGAGA",9,129.52,10.56,-0.2,0.05,2.93,1,0,">1 nonsynonymous","Q79E S129V",2
"lib1","SARS-CoV-2","TGTGTCCCAAACAGCA",3,31.74,6.04,-4.72,1.39,1.5,1.32,0.05,">1 nonsynonymous","G9F R25V",2
"lib1","SARS-CoV-2","TGTGTCCCAAATTCAG",5,231.91,10.78,0.01,0.06,2.87,1.07,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","TGTGTCCGGGCTGCGT",4,93.86,9.23,-1.53,0.1,2.06,1.13,0,">1 nonsynonymous","N107S I138G V173A",3
"lib1","SARS-CoV-2","TGTGTCCTTTCTTAGG",6,454.54,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","Y50G Y93E F156I",3
"lib1","SARS-CoV-2","TGTGTCGAAGATAAAA",2,72.94,10.8,0.04,0.06,3,1,0,"1 nonsynonymous","N1Y",1
"lib1","SARS-CoV-2","TGTGTCGCCTAACGAA",4,1.75,NA,NA,NA,NA,NA,NA,"stop","N13S N40* Y175N P197C",4
"lib1","SARS-CoV-2","TGTGTCGGGATTAAAA",1,13.07,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","N58S N92S L183G",3
"lib1","SARS-CoV-2","TGTGTGGAAAGAATCT",4,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N F47K F99L Y165K",4
"lib1","SARS-CoV-2","TGTGTGGACATTTATA",4,0.25,NA,NA,NA,NA,NA,NA,"stop","F44I K87* W106C C158R",4
"lib1","SARS-CoV-2","TGTGTGGCCGGCTAAT",1,54.03,10.62,-0.14,0.07,2.96,1,0,">1 nonsynonymous","L5E Q144M",2
"lib1","SARS-CoV-2","TGTGTGTAAAAAAGAC",4,40.96,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","A33R K48T F70P D97A A105S S129G",6
"lib1","SARS-CoV-2","TGTGTGTAACACCCAC",1,10.51,10.78,0.02,0.07,3,1.01,0,"1 nonsynonymous","N40S",1
"lib1","SARS-CoV-2","TGTGTTAAAGTTTTAA",6,35.77,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","N24F S41I V52S F160S A192S",5
"lib1","SARS-CoV-2","TGTGTTAAATTAAATA",10,53.7,6,-4.76,2,3,1.18,0,">1 nonsynonymous","C6S D34Q N107R S129L",4
"lib1","SARS-CoV-2","TGTGTTACGAGGTGTG",3,115.3,9.13,-1.64,0.09,2.51,1.03,0,">1 nonsynonymous","A42F Q176S",2
"lib1","SARS-CoV-2","TGTGTTACTATCAATC",3,50.39,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","P82S I138C A145E F167P",4
"lib1","SARS-CoV-2","TGTGTTAGCATTAGAG",3,25.44,6.56,-4.21,0.78,1.5,1.23,0.06,">1 nonsynonymous","N13W A81E G83V D97S Y119G E135K",6
"lib1","SARS-CoV-2","TGTGTTAGTATCTTAT",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K N130Y",2
"lib1","SARS-CoV-2","TGTGTTATTAAAATAT",6,106.51,10.03,-0.73,0.11,2.45,1.06,0,">1 nonsynonymous","N4T V77R",2
"lib1","SARS-CoV-2","TGTGTTCGTATCTAAC",5,69.8,9.09,-1.68,0.09,2.44,1.08,0,">1 nonsynonymous","G9T D97V N110S N118S Q144S",5
"lib1","SARS-CoV-2","TGTGTTGAGATTAATA",6,35.28,10.79,0.02,0.08,2.85,1.05,0,"1 nonsynonymous","A14N",1
"lib1","SARS-CoV-2","TGTGTTGGAGTAATAG",1,52.19,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S53V L60N G172T",3
"lib1","SARS-CoV-2","TGTGTTGTGAACTGCA",11,162.14,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R78T A105Q Y178D",3
"lib1","SARS-CoV-2","TGTGTTTAGAATGATA",2,42.65,10.79,0.03,0.02,2.93,1.05,0,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","TGTGTTTAGTAACAAG",2,24.34,7.56,-3.2,0.28,1.5,1.09,0.03,">1 nonsynonymous","N107Y V153E",2
"lib1","SARS-CoV-2","TGTGTTTCCAGGGTTA",2,10.13,8.39,-2.37,0.17,2.05,1.08,0.02,">1 nonsynonymous","V103L S129C S147A A190G",4
"lib1","SARS-CoV-2","TGTTAAAATAAAACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* N171F",2
"lib1","SARS-CoV-2","TGTTAAAATCAATATT",1,12.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I80W I88N D112G C158L",4
"lib1","SARS-CoV-2","TGTTAAACAAGCTTAA",5,82.38,8.3,-2.46,0.12,2.35,1.13,0.01,">1 nonsynonymous","P161D T201S",2
"lib1","SARS-CoV-2","TGTTAAACCCTACAAT",1,47.79,10.7,-0.07,0.07,2.87,1.08,0,">1 nonsynonymous","F8Y K48N",2
"lib1","SARS-CoV-2","TGTTAAAGCCAGAGAT",12,130.91,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87F V103L Y175K",3
"lib1","SARS-CoV-2","TGTTAAAGCGCACACA",3,70.24,9.02,-1.75,0.09,2.62,1.17,0,">1 nonsynonymous","F44R Y119S",2
"lib1","SARS-CoV-2","TGTTAAAGCGGTAAAC",1,16.87,10.74,-0.02,0.06,2.94,1.04,0,">1 nonsynonymous","T55I N64H",2
"lib1","SARS-CoV-2","TGTTAAATATCTGACA",1,40.2,6,-4.76,0.5,1.5,1.08,0,">1 nonsynonymous","I2N A14S N24W V32Y R78Y N107M",6
"lib1","SARS-CoV-2","TGTTAAATCTTCCTGA",2,17.81,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","R16V A22V G86D R124H",4
"lib1","SARS-CoV-2","TGTTAAATTACCTAGC",2,0.06,NA,NA,NA,NA,NA,NA,"stop","T15* G155Y",2
"lib1","SARS-CoV-2","TGTTAAATTGAAAGCC",4,70,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N58I F167R",2
"lib1","SARS-CoV-2","TGTTAACAACCAAAAT",5,103.64,8.71,-2.06,0.05,2.8,1.05,0,"1 nonsynonymous","Y143S",1
"lib1","SARS-CoV-2","TGTTAACAACTTTTGC",2,28.64,10.41,-0.35,0.09,2.68,1,0,">1 nonsynonymous","T55E P96Q",2
"lib1","SARS-CoV-2","TGTTAACAATACACTA",3,149.21,10.44,-0.32,0.05,2.9,1.03,0,">1 nonsynonymous","L5K Y35M D98Y K114M",4
"lib1","SARS-CoV-2","TGTTAACACCGCAGGA",9,59.65,6,-4.76,1.26,1.5,1.2,0.02,"1 nonsynonymous","R179M",1
"lib1","SARS-CoV-2","TGTTAACCAACCATGT",1,77.65,10.12,-0.65,0.1,2.7,1.02,0,">1 nonsynonymous","K26S A81G K128R",3
"lib1","SARS-CoV-2","TGTTAACCTAAGAAAT",1,20.69,10.82,0.06,0.13,2.9,1.04,0.01,">1 nonsynonymous","N64Y L122C",2
"lib1","SARS-CoV-2","TGTTAACGTAGACTAT",2,11.37,6.5,-4.26,0.49,1.5,1.1,0.02,">1 nonsynonymous","S36G S43F A145P Q168L",4
"lib1","SARS-CoV-2","TGTTAACTAGTAAAAA",7,0.63,NA,NA,NA,NA,NA,NA,"stop","N4* R179D L183G",3
"lib1","SARS-CoV-2","TGTTAACTCGGTGATT",10,19.67,9.36,-1.41,0.43,1.5,1,0.06,">1 nonsynonymous","N1H V52R V103S",3
"lib1","SARS-CoV-2","TGTTAACTGCATAGCA",2,20.2,6.46,-4.31,0.69,1.5,1.13,0.04,">1 nonsynonymous","D68V N92D E135L T201M",4
"lib1","SARS-CoV-2","TGTTAAGAACCCACAC",9,66.58,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D98W W106K G146I",3
"lib1","SARS-CoV-2","TGTTAAGAGTCAAAAG",12,57.19,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","S43A F99K P149H",3
"lib1","SARS-CoV-2","TGTTAAGATAACGTGT",4,88.31,9.42,-1.34,0.08,2.84,1.07,0,">1 nonsynonymous","S41W T85H G117S",3
"lib1","SARS-CoV-2","TGTTAAGCAGTGGACG",8,42.09,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","D75V I88R P149R",3
"lib1","SARS-CoV-2","TGTTAAGCCGTATGTG",6,5.88,NA,NA,NA,NA,NA,NA,"stop","F8L K56* S184T",3
"lib1","SARS-CoV-2","TGTTAAGTAAATCGAC",10,81.34,7.16,-3.6,0.27,1.5,1.21,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","TGTTAATAAACATGGG",10,175.73,10.72,-0.04,0.06,2.85,1.04,0,"1 nonsynonymous","T148K",1
"lib1","SARS-CoV-2","TGTTAATAATCCAAAA",2,6.31,6,-4.76,2,3,1.16,0,">1 nonsynonymous","V77E Q84F Y143N",3
"lib1","SARS-CoV-2","TGTTAATACCAATCGA",9,30.95,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N1M L57V N107I V115I G155H",5
"lib1","SARS-CoV-2","TGTTAATAGCGTGGAG",3,78.94,10.07,-0.69,0.06,2.28,1,0,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","TGTTAATTATATTGAT",5,96.92,10.04,-0.72,0.04,2.73,1.06,0,"1 nonsynonymous","Q79L",1
"lib1","SARS-CoV-2","TGTTAATTGGGATACA",5,50.59,6.03,-4.73,0.79,2.07,1.15,0.01,">1 nonsynonymous","F47L G86F Y91A W106K S129V P149S",6
"lib1","SARS-CoV-2","TGTTACAAGAAATCAC",8,41.91,10.39,-0.37,0.14,2.53,1.04,0.01,">1 nonsynonymous","L5G I80L",2
"lib1","SARS-CoV-2","TGTTACAATGAACGTA",1,33.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F70E Y159M Y175K",3
"lib1","SARS-CoV-2","TGTTACACACATTATT",7,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63P Q84C N107G",3
"lib1","SARS-CoV-2","TGTTACATCTACCCCT",2,22.41,10.57,-0.2,0.08,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTACATTTACGCCC",6,43.3,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","N107L N157P",2
"lib1","SARS-CoV-2","TGTTACCACAACCTCA",1,33.14,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","I28R S36L L60P Y93P",4
"lib1","SARS-CoV-2","TGTTACCAGAAACTAC",15,93.06,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N92E W106A D112Y N120C S139T",5
"lib1","SARS-CoV-2","TGTTACCCTAGGGCAA",4,82.93,10.79,0.03,0.07,2.95,1.04,0,">1 nonsynonymous","Y39M T140S",2
"lib1","SARS-CoV-2","TGTTACCCTTCGCCGA",1,15.77,10.7,-0.06,0.07,2.89,1.07,0,"1 nonsynonymous","L5R",1
"lib1","SARS-CoV-2","TGTTACCGAAATCCAC",3,40.51,10.49,-0.28,0.07,2.94,1,0,"1 nonsynonymous","F12L",1
"lib1","SARS-CoV-2","TGTTACCGCTTCATCA",1,54.34,10.46,-0.31,0.06,2.94,1.05,0,">1 nonsynonymous","K87L L122R T201M",3
"lib1","SARS-CoV-2","TGTTACGAATTTCCAG",2,9.69,6.96,-3.8,1,1.97,1.09,0.01,">1 nonsynonymous","P82I W106G",2
"lib1","SARS-CoV-2","TGTTACGATGGACGTA",1,16.37,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V71E Y121A G166S",3
"lib1","SARS-CoV-2","TGTTACGCGTATCCAG",6,63.15,8.99,-1.78,0.23,1.58,1.22,0.02,">1 nonsynonymous","T85K V103A",2
"lib1","SARS-CoV-2","TGTTACGGAAGAAAAG",5,54.46,10.69,-0.08,0.11,2.76,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGTTACTAATCTATCG",9,92,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N13K V37R F160R F167P",4
"lib1","SARS-CoV-2","TGTTACTACCCGGGAA",1,8.58,7.18,-3.59,0.5,1.5,1.27,0.06,">1 nonsynonymous","F44D D112T",2
"lib1","SARS-CoV-2","TGTTACTTAAAACTAG",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K N92I F99S S113N",4
"lib1","SARS-CoV-2","TGTTAGAACACTCGTT",14,221.52,10.11,-0.66,0.05,2.68,1.04,0,">1 nonsynonymous","K56S A105V",2
"lib1","SARS-CoV-2","TGTTAGACAACACATA",8,101.21,10.37,-0.39,0.1,2.32,1.01,0,">1 nonsynonymous","I2R T15V D90A Q163F",4
"lib1","SARS-CoV-2","TGTTAGACCACGTACG",7,0.38,NA,NA,NA,NA,NA,NA,"stop","T46F S53C D97* G146D T201Y",5
"lib1","SARS-CoV-2","TGTTAGATCCTGCCAT",1,1.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37S",1
"lib1","SARS-CoV-2","TGTTAGATCTCAACGG",1,52.99,9.99,-0.77,0.06,2.83,1.01,0,">1 nonsynonymous","S41V G152V S184V",3
"lib1","SARS-CoV-2","TGTTAGATCTGAGGCC",1,89.71,10.86,0.09,0.06,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTTAGCACCGAATAT",1,0.88,NA,NA,NA,NA,NA,NA,"stop","S113* G152S F185Y",3
"lib1","SARS-CoV-2","TGTTAGCTTACATTCT",2,23.01,9.6,-1.17,0.16,1.63,1.09,0.01,"1 nonsynonymous","D137Y",1
"lib1","SARS-CoV-2","TGTTAGGAAACAACTA",1,5.55,6,-4.76,2,3,1.09,0.02,">1 nonsynonymous","N1R C31Y V103L A145S Y178P",5
"lib1","SARS-CoV-2","TGTTAGGAATAATCTT",5,36.9,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G83W G101S",2
"lib1","SARS-CoV-2","TGTTAGGAGCTAATAT",3,76.58,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L38R G86A K94A",3
"lib1","SARS-CoV-2","TGTTAGGCAAATTGAC",3,46.62,9.76,-1,0.13,1.84,1.13,0.01,">1 nonsynonymous","S19M T55V F160H",3
"lib1","SARS-CoV-2","TGTTAGGGAAATACAT",8,122.1,10.12,-0.65,0.07,2.62,1.02,0,">1 nonsynonymous","P7D A89Q",2
"lib1","SARS-CoV-2","TGTTAGTAAGAGACTG",1,8.77,10.01,-0.75,0.24,2.55,1.17,0.02,">1 nonsynonymous","Y66T N109Y S129T K198R",4
"lib1","SARS-CoV-2","TGTTAGTATTGGAAAC",1,28.03,9.54,-1.23,0.07,2.94,1.07,0,">1 nonsynonymous","C61K N118T",2
"lib1","SARS-CoV-2","TGTTAGTTCTACTAAG",6,39.61,10.05,-0.71,0.11,1.95,1.06,0.01,">1 nonsynonymous","S43A Y66T V181A",3
"lib1","SARS-CoV-2","TGTTATAAAAAATATA",2,36.36,10.67,-0.1,0.05,2.91,1.05,0,"1 nonsynonymous","T3A",1
"lib1","SARS-CoV-2","TGTTATAACGGAGAAC",1,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y P96R Y123I F167S",4
"lib1","SARS-CoV-2","TGTTATAATGTGTTTA",8,92.45,10,-0.76,0.11,2.19,1.05,0,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","TGTTATACAGTGAAGG",3,71.53,10.06,-0.7,0.13,2.43,1.02,0.01,">1 nonsynonymous","W106R T201Q",2
"lib1","SARS-CoV-2","TGTTATAGCACGATTG",2,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T L183C T201N",3
"lib1","SARS-CoV-2","TGTTATATACAACCAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","N107K V153*",2
"lib1","SARS-CoV-2","TGTTATATTCACCTGC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib1","SARS-CoV-2","TGTTATCAGCAAACGT",6,60.13,9,-1.76,0.1,2.58,1.12,0,">1 nonsynonymous","V37S A42L P161T",3
"lib1","SARS-CoV-2","TGTTATCATCAAAGAT",7,110.4,7.05,-3.71,0.19,1.5,1.16,0.01,">1 nonsynonymous","N4T S43H D59I G117M T170M T201Y",6
"lib1","SARS-CoV-2","TGTTATCCCACATAGA",9,174.22,9.97,-0.79,0.1,2.37,1.05,0,"1 nonsynonymous","L38A",1
"lib1","SARS-CoV-2","TGTTATCGCTGAAGTT",1,46.74,10.21,-0.56,0.05,2.85,1,0,">1 nonsynonymous","G9W C31H",2
"lib1","SARS-CoV-2","TGTTATCTAACCCAGA",1,1.5,NA,NA,NA,NA,NA,NA,"stop","C6Y L60R G116* Y119A",4
"lib1","SARS-CoV-2","TGTTATGACGCCCCAA",12,292.47,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V32T C61H D68E C158S",4
"lib1","SARS-CoV-2","TGTTATGACTTATTCT",4,118.73,10.14,-0.62,0.06,2.94,1,0,">1 nonsynonymous","T148N F160A G166S",3
"lib1","SARS-CoV-2","TGTTATGGATAATGTT",4,130.85,10.86,0.1,0.06,2.94,1.04,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","TGTTATGGATCAGAGT",1,1.7,NA,NA,NA,NA,NA,NA,"stop","S19M L60P F156L A190V K199*",5
"lib1","SARS-CoV-2","TGTTATTAAAAAATTA",5,522.61,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","C6S K94A V103M V115L T201P",5
"lib1","SARS-CoV-2","TGTTATTAAAGACATT",2,72.66,10.78,0.01,0.08,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TGTTATTTCGTAGATT",3,74.07,9.93,-0.84,0.11,2.59,1.06,0.01,">1 nonsynonymous","Y66E G174S",2
"lib1","SARS-CoV-2","TGTTATTTCTATAAAA",3,65.09,10.04,-0.73,0.09,2.48,1.07,0,">1 nonsynonymous","Q84K G174W",2
"lib1","SARS-CoV-2","TGTTATTTGATTCCCT",3,34.26,9.25,-1.51,0.18,1.87,1.07,0.02,">1 nonsynonymous","G9R T46V I88V N120L N130Y",5
"lib1","SARS-CoV-2","TGTTCAAAAACGCCGT",3,16.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49T N92G L131P P177S",4
"lib1","SARS-CoV-2","TGTTCAACCGGCACAT",4,45.81,8.91,-1.86,0.14,1.81,1.15,0.01,">1 nonsynonymous","L5A F12M K87A D98P N120L",5
"lib1","SARS-CoV-2","TGTTCAACGGCTTGAT",3,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R P96V K114L",3
"lib1","SARS-CoV-2","TGTTCAATCCATGGCT",1,33.67,9.4,-1.37,0.07,2,1.04,0,">1 nonsynonymous","D90F L122T P149F G152D",4
"lib1","SARS-CoV-2","TGTTCAATTCTGGGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","S43L D98C G116A K128* T201G",5
"lib1","SARS-CoV-2","TGTTCACAAGTCGTCC",6,0.52,NA,NA,NA,NA,NA,NA,"stop","P7A F17I A67S A89W G152N L187*",6
"lib1","SARS-CoV-2","TGTTCACTAGTGCCCT",2,14.57,10.17,-0.59,0.09,2.84,1,0,">1 nonsynonymous","A33T S129V G155S",3
"lib1","SARS-CoV-2","TGTTCACTCCAACAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","V37* T55R",2
"lib1","SARS-CoV-2","TGTTCACTCTTATAGG",1,60.26,10.35,-0.42,0.07,2.76,1.05,0,">1 nonsynonymous","F8L F44P",2
"lib1","SARS-CoV-2","TGTTCAGAAGCGTTGC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","N40H P96G S139N V181*",4
"lib1","SARS-CoV-2","TGTTCAGATTTCAACT",3,84.13,10.7,-0.06,0.06,2.85,1.09,0,"1 nonsynonymous","T140N",1
"lib1","SARS-CoV-2","TGTTCAGCTAATCGCT",4,88.99,7.92,-2.84,0.26,1.5,1.12,0.02,">1 nonsynonymous","K114G I138A G152I",3
"lib1","SARS-CoV-2","TGTTCAGTAAAACGAA",2,17.13,9.84,-0.93,0.17,1.93,1.06,0.01,"1 nonsynonymous","Q79V",1
"lib1","SARS-CoV-2","TGTTCAGTCCTAGAAA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","Q84L Y143F S147*",3
"lib1","SARS-CoV-2","TGTTCATAACAGTTGC",3,11.48,7.2,-3.56,0.25,1.5,1.08,0.02,">1 nonsynonymous","L60A D137L",2
"lib1","SARS-CoV-2","TGTTCATCTCCGTAGG",2,141.5,6,-4.76,1.14,1.5,1.16,0.02,">1 nonsynonymous","R16S K56A L95R G146L",4
"lib1","SARS-CoV-2","TGTTCATTGAACACAT",4,205.37,10.77,0.01,0.06,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTCATTTCTAGTCA",3,60.8,9.57,-1.19,0.06,2.85,1.07,0,">1 nonsynonymous","L5S K87D I142L",3
"lib1","SARS-CoV-2","TGTTCCAACTCCAATA",3,37.53,8.92,-1.84,0.11,2.42,1.09,0,">1 nonsynonymous","N64I D112E L187Q",3
"lib1","SARS-CoV-2","TGTTCCAGAAAAGTTC",1,6.42,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A22K T55S Y66P H189W",4
"lib1","SARS-CoV-2","TGTTCCCACGAATAAT",3,39.33,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","F8G N107P D112S",3
"lib1","SARS-CoV-2","TGTTCCCCAGCATATC",2,28.73,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","F70R P82E",2
"lib1","SARS-CoV-2","TGTTCCCGAAATTCCA",5,91.64,10.67,-0.1,0.05,2.93,1.04,0,"1 nonsynonymous","Y39G",1
"lib1","SARS-CoV-2","TGTTCCCGAGCCACTA",2,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K F185Y",2
"lib1","SARS-CoV-2","TGTTCCCGGCGGCATT",3,44.2,8.28,-2.48,0.24,1.5,1.18,0.02,">1 nonsynonymous","V37I N92C G174L",3
"lib1","SARS-CoV-2","TGTTCCCTATAGACGG",1,27.75,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","I80K Y119P Y175N",3
"lib1","SARS-CoV-2","TGTTCCGAGGTTCCCT",7,87.92,10.12,-0.65,0.07,2.44,1,0,">1 nonsynonymous","L57G D97S V173M",3
"lib1","SARS-CoV-2","TGTTCCGCATACACGA",1,29.97,7.44,-3.32,0.27,1.65,1.19,0.03,">1 nonsynonymous","N4A A14V Y143T T148R",4
"lib1","SARS-CoV-2","TGTTCCGGCCTCTGAA",7,0.34,NA,NA,NA,NA,NA,NA,"stop","R136W N171*",2
"lib1","SARS-CoV-2","TGTTCCGTTAAACCAG",1,10.58,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S45I F62N D90L R127Q",4
"lib1","SARS-CoV-2","TGTTCCTCATACATTG",7,134.35,9.98,-0.79,0.05,2.89,1.05,0,"1 nonsynonymous","G146T",1
"lib1","SARS-CoV-2","TGTTCCTTCTAAAGAT",5,18.97,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G51Y D75T G86Y",3
"lib1","SARS-CoV-2","TGTTCGAAATTTTCAA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","A14T C31Y N40G F44C C150S V173L K199*",7
"lib1","SARS-CoV-2","TGTTCGAGTATTATCG",4,36.55,10.74,-0.03,0.08,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTCGATCGAGCATT",5,131.98,10.64,-0.13,0.04,2.89,1.05,0,">1 nonsynonymous","T100L V173G",2
"lib1","SARS-CoV-2","TGTTCGCCGAAAAGGT",6,26.52,9.69,-1.07,0.25,1.62,1.09,0.02,"1 nonsynonymous","R127Q",1
"lib1","SARS-CoV-2","TGTTCGCCTTAGATAA",3,17.31,10.84,0.08,0.28,2.69,1,0.02,">1 nonsynonymous","N110R K128D",2
"lib1","SARS-CoV-2","TGTTCGGCTTCCCCTA",3,49.33,9.07,-1.69,0.09,2.38,1.16,0,">1 nonsynonymous","Y123R I138T P161G",3
"lib1","SARS-CoV-2","TGTTCGTCGCAGATTG",1,27.64,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","C6I Y121K L131H Q176H V180I",5
"lib1","SARS-CoV-2","TGTTCGTCTTGGGGTC",1,6.42,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","T3D C61S P82Y P96T",4
"lib1","SARS-CoV-2","TGTTCGTGATCTGAAT",8,90.13,6,-4.76,1.6,1.5,1.19,0.01,">1 nonsynonymous","L5T G51V C158P C195I",4
"lib1","SARS-CoV-2","TGTTCTAACATATTAC",1,21.77,9.81,-0.95,0.13,1.93,1.07,0.01,">1 nonsynonymous","Q84V F99I",2
"lib1","SARS-CoV-2","TGTTCTACTTAAACTA",1,27.53,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","R73Q K94W",2
"lib1","SARS-CoV-2","TGTTCTATCAAAGGAG",9,3,NA,NA,NA,NA,NA,NA,"stop","R27W Y121* N130G C158S P177S L187R",6
"lib1","SARS-CoV-2","TGTTCTATTAATAATA",3,1.92,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGTTCTCAAATCAACG",3,14.75,10.77,0,0.1,2.81,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTCTCACCGTGCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55F V103M F160I",3
"lib1","SARS-CoV-2","TGTTCTCGGTCCGTTG",4,1.6,NA,NA,NA,NA,NA,NA,"stop","Y21* I72K W106L",3
"lib1","SARS-CoV-2","TGTTCTGACCAAAAAA",6,1.43,NA,NA,NA,NA,NA,NA,"stop","N13* W23L D34I P169T G172S",5
"lib1","SARS-CoV-2","TGTTCTGCCGCAAACC",1,34.56,10.63,-0.14,0.06,2.95,1.04,0,"1 nonsynonymous","T140A",1
"lib1","SARS-CoV-2","TGTTCTGCGCCTGAAA",2,23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N40R Y50Q",3
"lib1","SARS-CoV-2","TGTTCTGTTTGTGAGA",4,19.1,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","Y39P S139L Q144L E154N",4
"lib1","SARS-CoV-2","TGTTCTTAAGCCCCAG",1,22.21,10.66,-0.11,0.08,2.94,1,0,">1 nonsynonymous","I28V Y35V",2
"lib1","SARS-CoV-2","TGTTGAAAAAAATGAA",5,31.47,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","S41Q G51C C102E Y119D T201A",5
"lib1","SARS-CoV-2","TGTTGAAAACTAGTTG",3,51.69,9.41,-1.35,0.21,1.77,1.13,0.02,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","TGTTGAATTCTTTTTT",9,15.01,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","A81T T85I V103N D112R A145D",5
"lib1","SARS-CoV-2","TGTTGACAAACTTTAC",2,24.71,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I28W C49L K56E D90V S113F L162K",6
"lib1","SARS-CoV-2","TGTTGACAGATAGACC",3,71.22,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T55S S113D Y143N Y175I",4
"lib1","SARS-CoV-2","TGTTGACAGGGGAAAC",8,115.24,10.02,-0.74,0.08,2.68,1.02,0,">1 nonsynonymous","C6Y N120A",2
"lib1","SARS-CoV-2","TGTTGACAGTATTGAA",1,72.04,8.68,-2.09,0.09,2.67,1.04,0,">1 nonsynonymous","G9S A14D Q168L",3
"lib1","SARS-CoV-2","TGTTGACATAAGCCCC",5,48.84,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","V20H T140H G155H",3
"lib1","SARS-CoV-2","TGTTGACCACGCATAT",5,57.82,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","G51V G74L Q84P D98E T201C",5
"lib1","SARS-CoV-2","TGTTGACCCGAGAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12M S41L F62K Q79E K87* I104M F134C",7
"lib1","SARS-CoV-2","TGTTGACCGGAAGTAT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N110* Y175S",2
"lib1","SARS-CoV-2","TGTTGACCTGTCAGTA",1,39.94,8.03,-2.73,0.12,2.04,1.12,0,">1 nonsynonymous","A42S Y175M",2
"lib1","SARS-CoV-2","TGTTGACGAAAACAGA",2,13.54,6,-4.76,2,3,1.07,0,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","TGTTGACTACCTACGT",2,23.59,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y35R Y50A T55M",3
"lib1","SARS-CoV-2","TGTTGACTATAACAAT",3,27.15,10.66,-0.11,0.06,2.97,1,0,"1 nonsynonymous","K56F",1
"lib1","SARS-CoV-2","TGTTGACTGTAATTAA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","G116* C158N Y175A",3
"lib1","SARS-CoV-2","TGTTGACTGTTCTACA",1,32.72,8.93,-1.84,0.08,1.79,1.08,0,">1 nonsynonymous","K26L D98F Y143L",3
"lib1","SARS-CoV-2","TGTTGAGGAAGACCAT",2,14.21,6.52,-4.24,0.56,1.5,1.16,0.03,">1 nonsynonymous","L95V V103M N120C T148A",4
"lib1","SARS-CoV-2","TGTTGATAAAACGCTG",5,272.51,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10R V182D",2
"lib1","SARS-CoV-2","TGTTGCACCGGGGTGC",1,11.2,9.51,-1.25,0.2,2.21,1.08,0.02,">1 nonsynonymous","C61A V153L F185S",3
"lib1","SARS-CoV-2","TGTTGCATTAAACTAT",2,35.43,10.61,-0.15,0.05,2.88,1.06,0,">1 nonsynonymous","I2C C61M K128M",3
"lib1","SARS-CoV-2","TGTTGCCATCTGAAAA",1,9.09,9.81,-0.96,0.16,2.16,1,0.01,">1 nonsynonymous","I2S P133L N151E",3
"lib1","SARS-CoV-2","TGTTGCCCTCAAAAAA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S Y121R",2
"lib1","SARS-CoV-2","TGTTGCCGAAGTTATA",9,152.76,10.44,-0.32,0.03,2.88,1.02,0,">1 nonsynonymous","D97N V115G",2
"lib1","SARS-CoV-2","TGTTGCGCGAACGACC",13,143.23,10.64,-0.13,0.03,2.94,1.02,0,">1 nonsynonymous","A81S T201S",2
"lib1","SARS-CoV-2","TGTTGCGGTCGTAGCT",15,157.26,7.35,-3.42,0.32,1.5,1.19,0.03,">1 nonsynonymous","L5K G101C",2
"lib1","SARS-CoV-2","TGTTGCTAAGAGCATA",4,1.07,NA,NA,NA,NA,NA,NA,"stop","Y35A R136*",2
"lib1","SARS-CoV-2","TGTTGCTTCCACCACT",5,127.24,6,-4.76,1.61,1.5,1.15,0.01,">1 nonsynonymous","A22I C61H T85Y S139R Y178S",5
"lib1","SARS-CoV-2","TGTTGGAACATTCTAT",2,7.73,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81G P96Y A105S K132L C158W",5
"lib1","SARS-CoV-2","TGTTGGACAACAATAC",1,0.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27M",1
"lib1","SARS-CoV-2","TGTTGGACTCACATAC",1,13.83,6,-4.76,2,1.5,1.12,0.05,">1 nonsynonymous","S36F T63Q C102T F167I",4
"lib1","SARS-CoV-2","TGTTGGATATAAAGTA",3,69.69,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","F126S R136V G146T",3
"lib1","SARS-CoV-2","TGTTGGCCAACGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* N64* D98C",3
"lib1","SARS-CoV-2","TGTTGGCGAGATAAAT",6,1.55,NA,NA,NA,NA,NA,NA,"stop","G74E G116* L122* Q176R",4
"lib1","SARS-CoV-2","TGTTGGCGTACTACGC",4,0.47,NA,NA,NA,NA,NA,NA,"stop","A33T D59* F160M G166R V173T",5
"lib1","SARS-CoV-2","TGTTGGGACAAAATCC",9,71.54,6.02,-4.75,0.91,1.5,1.18,0.02,">1 nonsynonymous","V65T G86F K114P T170L",4
"lib1","SARS-CoV-2","TGTTGGGATTCCTAGT",2,12.07,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","Q79G T100L S113F F167S",4
"lib1","SARS-CoV-2","TGTTGGGCTCTTAAGG",6,54.83,7.01,-3.75,0.45,1.5,1.25,0.04,">1 nonsynonymous","F8H I28T P149T S200R",4
"lib1","SARS-CoV-2","TGTTGGGCTTGAGTGG",2,11.34,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I2V C49R A67V A81E F99N R124A",6
"lib1","SARS-CoV-2","TGTTGGTACATATGAT",5,1.36,NA,NA,NA,NA,NA,NA,"stop","K132* N171H",2
"lib1","SARS-CoV-2","TGTTGGTATCAATCTA",2,15.82,9.63,-1.13,0.2,1.65,1.14,0.02,"1 nonsynonymous","F12K",1
"lib1","SARS-CoV-2","TGTTGTAAAAAGTTAT",1,93.43,7.35,-3.42,0.28,1.5,1.08,0.02,">1 nonsynonymous","S36V Y165P",2
"lib1","SARS-CoV-2","TGTTGTAATCCGGTGT",2,15.75,9.74,-1.02,0.16,2.22,1.01,0.01,">1 nonsynonymous","G116R P133H",2
"lib1","SARS-CoV-2","TGTTGTCAAAAGATTT",19,71.25,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","A22T N58D V103S F156P",4
"lib1","SARS-CoV-2","TGTTGTCAAAGCATCA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","Y35T I104* G152Y P197A",4
"lib1","SARS-CoV-2","TGTTGTCCACGGCGAT",4,85.54,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3E V37D I72V G86F",4
"lib1","SARS-CoV-2","TGTTGTGAGTTGGTAG",4,47.15,10.36,-0.41,0.05,2.91,1.03,0,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","TGTTGTTTTATCAGGA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E V52R",2
"lib1","SARS-CoV-2","TGTTTAACAACAATTA",2,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V D137P",2
"lib1","SARS-CoV-2","TGTTTAACACCCTATC",2,26.45,10.64,-0.12,0.11,2.81,1,0.01,">1 nonsynonymous","P7A S29T S41F E141R",4
"lib1","SARS-CoV-2","TGTTTAAGTGTAAAAG",10,66.97,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G51I F99S",2
"lib1","SARS-CoV-2","TGTTTAATAACAAAGC",9,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L S113H F126Y V153M",4
"lib1","SARS-CoV-2","TGTTTAATCGCGGTCA",7,80.68,10.76,0,0.05,2.91,1.02,0,">1 nonsynonymous","L5V K128R",2
"lib1","SARS-CoV-2","TGTTTAATTGATGCAA",12,83.56,6,-4.76,1.02,1.5,1.23,0.01,">1 nonsynonymous","F134L C158K Q168R",3
"lib1","SARS-CoV-2","TGTTTAATTGCGTCCA",3,0.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87T",1
"lib1","SARS-CoV-2","TGTTTAATTTAAATCT",6,60.42,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","A22N A33Q R73Y R127A",4
"lib1","SARS-CoV-2","TGTTTACATACGAACA",1,28.93,10.22,-0.55,0.1,2.75,1.05,0.01,">1 nonsynonymous","N58H Y91F T170Q",3
"lib1","SARS-CoV-2","TGTTTACGACCTCTTA",2,10.04,9.14,-1.63,0.3,2.24,1.14,0.04,">1 nonsynonymous","G86V N107H R136T",3
"lib1","SARS-CoV-2","TGTTTACGATTCTCCG",6,41.74,7.95,-2.82,0.32,1.5,1,0.03,">1 nonsynonymous","F12S Y121F N130C",3
"lib1","SARS-CoV-2","TGTTTACTGACCATAT",3,43.68,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","V52D G83P C158K",3
"lib1","SARS-CoV-2","TGTTTAGACATCAAGG",5,6.69,7.03,-3.73,0.57,1.5,1.06,0.06,">1 nonsynonymous","P7V F17E D112A L125H E141F",5
"lib1","SARS-CoV-2","TGTTTAGATTCTAGTA",2,100,6,-4.76,1.3,1.5,1.15,0.01,">1 nonsynonymous","K87Y K132L C158P",3
"lib1","SARS-CoV-2","TGTTTAGGTTAATCCC",6,99.27,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7Q K26Q F44K D59F Y91F W106L P177G",7
"lib1","SARS-CoV-2","TGTTTAGTCAAATGAG",3,47.64,6.11,-4.66,0.85,1.5,1.19,0.02,">1 nonsynonymous","C61M Q79T N120M K128L",4
"lib1","SARS-CoV-2","TGTTTATAAAACATAA",1,5.78,NA,NA,NA,NA,NA,NA,"stop","N30T A89V Y93I F156*",4
"lib1","SARS-CoV-2","TGTTTATAATCTAAGC",15,52.75,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V52D D68Q Q163R",3
"lib1","SARS-CoV-2","TGTTTATAGATCAGGC",1,8.18,10.67,-0.09,0.14,2.91,1.05,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TGTTTATAGGACCCGG",9,189.88,10.5,-0.27,0.05,2.93,1.02,0,">1 nonsynonymous","A22R K87I P149S P197L",4
"lib1","SARS-CoV-2","TGTTTATAGGTAAAAA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","L60A K114L L122* T148V",4
"lib1","SARS-CoV-2","TGTTTATATTCCGGTC",3,28.12,6.09,-4.68,0.31,3,1.14,0,">1 nonsynonymous","L60K K94M E154L G174T H189W",5
"lib1","SARS-CoV-2","TGTTTATTACGATCTA",2,19.93,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F44Y T55Y N107F S147G",4
"lib1","SARS-CoV-2","TGTTTCAAATGCAATG",2,43.26,10.75,-0.02,0.06,2.94,1.03,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","TGTTTCATACACAAGT",9,113.52,10.79,0.03,0.06,2.89,1.05,0,">1 nonsynonymous","V37W C195F",2
"lib1","SARS-CoV-2","TGTTTCATCCAGCAAT",3,38.22,9.9,-0.86,0.16,2.25,1,0.01,">1 nonsynonymous","A14N A22I",2
"lib1","SARS-CoV-2","TGTTTCCATCTAGGCG",3,52.55,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A89R G116R Y159S T201D",4
"lib1","SARS-CoV-2","TGTTTCCCGACTATGG",2,20.45,10.76,0,0.08,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTTCCGGGAGAGGT",9,553.76,9.48,-1.28,0.04,2.84,1.08,0,">1 nonsynonymous","Y119N S129H",2
"lib1","SARS-CoV-2","TGTTTCGAAATGAGAT",2,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R Y123A C158I",3
"lib1","SARS-CoV-2","TGTTTCGCAGCATAAT",2,34.22,10.23,-0.53,0.15,2.48,1.04,0.01,">1 nonsynonymous","K26N Y35L S41L V77L S129Q",5
"lib1","SARS-CoV-2","TGTTTCGGAATAGTAT",2,24.86,9.31,-1.45,0.07,2.74,1.09,0,">1 nonsynonymous","Y119T S184I",2
"lib1","SARS-CoV-2","TGTTTCGGCACTATAC",1,80.04,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","S29L Y175H P177R",3
"lib1","SARS-CoV-2","TGTTTCTCGCATAGCT",5,84.91,10.75,-0.01,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTTCTGCATAAAAA",6,13.37,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","T15A A81G K94G P149N Q176R F185I",6
"lib1","SARS-CoV-2","TGTTTGAAAGAAAAGA",3,52.88,9.84,-0.93,0.1,2.39,1.06,0,">1 nonsynonymous","L5S F12Y F62W",3
"lib1","SARS-CoV-2","TGTTTGAAAGCCTTAA",7,72.91,10.47,-0.29,0.1,2.6,1.08,0,">1 nonsynonymous","N4H E135G",2
"lib1","SARS-CoV-2","TGTTTGACCATTGCGG",6,50.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","Y93R T140V",2
"lib1","SARS-CoV-2","TGTTTGAGGGCCGAAA",4,41.27,10.57,-0.19,0.07,2.88,1.06,0,">1 nonsynonymous","D97F K128R",2
"lib1","SARS-CoV-2","TGTTTGCACAAAGAAA",4,83.6,10.79,0.02,0.07,2.9,1.06,0,"1 nonsynonymous","K48R",1
"lib1","SARS-CoV-2","TGTTTGCATCAAAATC",7,58.18,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","C102Y C158Y",2
"lib1","SARS-CoV-2","TGTTTGCCCCCGGTCG",2,90.21,10.67,-0.09,0.07,2.94,1.03,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","TGTTTGCTACTTCTTA",1,4.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TGTTTGGCTTCACCCC",8,58.93,6,-4.76,1.04,1.5,1.14,0.01,">1 nonsynonymous","P7V P82L K87S T100N",4
"lib1","SARS-CoV-2","TGTTTGGGAAGAGTTG",2,3.09,NA,NA,NA,NA,NA,NA,"stop","V77M K94N K132* T170I H189N",5
"lib1","SARS-CoV-2","TGTTTGGGCACATATG",7,83.95,10.09,-0.67,0.09,2.3,1.01,0,">1 nonsynonymous","R136Y P149S T201A",3
"lib1","SARS-CoV-2","TGTTTGGTATTTTATT",6,6.66,NA,NA,NA,NA,NA,NA,"stop","N40H K94* K128Y",3
"lib1","SARS-CoV-2","TGTTTGTACATAATAT",3,37.63,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I88L D98W G174V",3
"lib1","SARS-CoV-2","TGTTTGTGAAACCAAA",3,35.67,9.09,-1.67,0.06,2.91,1.09,0,">1 nonsynonymous","Y119M G152N",2
"lib1","SARS-CoV-2","TGTTTGTTGAATAAAA",7,7.98,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3L K87M V103Q",3
"lib1","SARS-CoV-2","TGTTTTAATAACTTCG",2,57.08,10.87,0.1,0.1,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TGTTTTACAATTGGTT",1,13.88,10.67,-0.1,0.11,2.93,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TGTTTTACCAGGACAC",2,35.62,9.03,-1.73,0.19,1.81,1.16,0.02,">1 nonsynonymous","S29T L60M K87S P133R",4
"lib1","SARS-CoV-2","TGTTTTAGAGAACGTT",13,326.77,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","I28G Y35I D68R N92W I142V",5
"lib1","SARS-CoV-2","TGTTTTCCATCTGAAT",2,44.1,10.62,-0.15,0.04,2.94,1.01,0,">1 nonsynonymous","Y121L S200H",2
"lib1","SARS-CoV-2","TGTTTTCGCTACCTTA",9,95.13,6,-4.76,1.9,1.5,1.16,0.01,">1 nonsynonymous","N1S K56M G146Q C150H K199R",5
"lib1","SARS-CoV-2","TGTTTTCTATGTCTTA",5,113.77,10.72,-0.04,0.05,2.94,1.01,0,"1 nonsynonymous","S53R",1
"lib1","SARS-CoV-2","TGTTTTGACGGATTTA",4,80.46,9.87,-0.89,0.12,2.6,1.05,0.01,">1 nonsynonymous","R27T Y35P P149C",3
"lib1","SARS-CoV-2","TGTTTTGCCCACGTTT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","F8S F12*",2
"lib1","SARS-CoV-2","TGTTTTTAAGAGGAGC",6,71.8,10.7,-0.06,0.04,2.94,1.01,0,">1 nonsynonymous","D98Y N130V",2
"lib1","SARS-CoV-2","TGTTTTTATTAATAAT",14,63.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S69I K94A K128V P149T",4
"lib1","SARS-CoV-2","TGTTTTTCGCTTTAGC",17,135.71,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D59L G172K",2
"lib1","SARS-CoV-2","TGTTTTTGGCGCGATG",7,27.51,10.64,-0.12,0.08,2.85,1.13,0,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","TGTTTTTTATTTAATG",2,26.29,10.74,-0.03,0.14,2.83,1.08,0.01,"1 nonsynonymous","S43T",1
"lib1","SARS-CoV-2","TTAAAAAAAACTAAAA",1,31.11,9.84,-0.92,0.11,2.65,1,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","TTAAAAAAAAGGAAAA",8,87.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32T D97I C102F K132C",4
"lib1","SARS-CoV-2","TTAAAAAAAAGGTAAG",3,54.34,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F44S G155Y Y159P Y165V L187D",5
"lib1","SARS-CoV-2","TTAAAAAAAATTAGCG",1,7.77,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P82V P96T N118S K198C",4
"lib1","SARS-CoV-2","TTAAAAAAACCTTGCA",12,84.81,10.24,-0.53,0.03,2.9,1.06,0,">1 nonsynonymous","L60F G174L",2
"lib1","SARS-CoV-2","TTAAAAAAAGAGTCTT",4,48.09,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F156C F167A K198R",3
"lib1","SARS-CoV-2","TTAAAAAAAGCAATAC",1,65.64,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","V37R G172M T201N",3
"lib1","SARS-CoV-2","TTAAAAAACACATTAT",4,24.28,9.62,-1.14,0.21,1.5,1.04,0.02,">1 nonsynonymous","N13K S69L",2
"lib1","SARS-CoV-2","TTAAAAAACCAGTCGG",6,67.87,10.1,-0.66,0.08,2.4,1.03,0,"1 nonsynonymous","V65W",1
"lib1","SARS-CoV-2","TTAAAAAACCGAGTCA",4,94.87,10.62,-0.14,0.05,2.9,1.05,0,">1 nonsynonymous","G116H S129Q",2
"lib1","SARS-CoV-2","TTAAAAAACTGTGATC",2,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N P96H N107T",3
"lib1","SARS-CoV-2","TTAAAAAAGAATTGGA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","N107Y E141V C150G F156*",4
"lib1","SARS-CoV-2","TTAAAAAAGATATGTG",5,31.3,9.76,-1,0.17,1.86,1.08,0.01,">1 nonsynonymous","D137S V153L",2
"lib1","SARS-CoV-2","TTAAAAAAGATTTAAG",8,42.74,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C6H N40T L60P I88S",4
"lib1","SARS-CoV-2","TTAAAAAAGGATTCTG",7,1.59,NA,NA,NA,NA,NA,NA,"stop","R25S S69* P161H",3
"lib1","SARS-CoV-2","TTAAAAAAGTAACGCA",1,5.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C61L T100H F156N L162E",5
"lib1","SARS-CoV-2","TTAAAAAATGAAGTCC",7,49.66,10.84,0.08,0.06,2.9,1.06,0,"1 nonsynonymous","Y39L",1
"lib1","SARS-CoV-2","TTAAAAAATGTGGGGT",2,6.45,10.3,-0.46,0.34,2.21,1,0.02,">1 nonsynonymous","S41C E135L",2
"lib1","SARS-CoV-2","TTAAAAAATTCCAAAG",3,41.87,10.69,-0.07,0.05,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAAAACAATAAAGT",5,0,NA,NA,NA,NA,NA,NA,"stop","D90* L125S A145V L188Y",4
"lib1","SARS-CoV-2","TTAAAAACAATCGGTT",3,36.14,6,-4.76,2,3,1.18,0,">1 nonsynonymous","L38S V71G",2
"lib1","SARS-CoV-2","TTAAAAACATTACCAA",2,10.47,8.87,-1.9,0.1,2.68,1.2,0,">1 nonsynonymous","T100N G146Q L188R",3
"lib1","SARS-CoV-2","TTAAAAACATTGACTA",8,100.51,6.07,-4.7,0.88,1.5,1.22,0.02,">1 nonsynonymous","I2F G9S D97R W106S Y119I T140K T170M Y178D",8
"lib1","SARS-CoV-2","TTAAAAACCCGTGTCG",11,88.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L W106V D112V Y119F L187P",5
"lib1","SARS-CoV-2","TTAAAAACCGACAAAA",1,27.57,10.3,-0.46,0.16,2.28,1.05,0.02,"synonymous","",0
"lib1","SARS-CoV-2","TTAAAAACCTTTTGAC",2,14.18,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G9T A105N S113V L125R P149S T201Q",6
"lib1","SARS-CoV-2","TTAAAAACGAATGGTG",10,89.27,10.02,-0.74,0.07,2.11,1.04,0,"1 nonsynonymous","C49V",1
"lib1","SARS-CoV-2","TTAAAAACGAATTGAC",4,0,NA,NA,NA,NA,NA,NA,"stop","K56P Y93R E154*",3
"lib1","SARS-CoV-2","TTAAAAACGCAAGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2Y V11* K26L",3
"lib1","SARS-CoV-2","TTAAAAACGGCCAAGC",2,25.66,10.73,-0.03,0.06,2.95,1.01,0,">1 nonsynonymous","L5T D90G L122R P197L",4
"lib1","SARS-CoV-2","TTAAAAAGAAGCTAAG",1,0.34,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib1","SARS-CoV-2","TTAAAAAGAATCAGTT",9,49.15,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I2L I80N L122P",3
"lib1","SARS-CoV-2","TTAAAAAGAGTCATTG",2,6.42,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S43A P54R D112R Y159I",4
"lib1","SARS-CoV-2","TTAAAAAGCCTGTTAA",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R R73I G74C Q176L",4
"lib1","SARS-CoV-2","TTAAAAAGGGACTCTT",5,23.77,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","A18T C31F S69A N107R Y121T",5
"lib1","SARS-CoV-2","TTAAAAAGTAGTAGAA",7,31.85,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I2L S43P C61E E141M G152W V182P",6
"lib1","SARS-CoV-2","TTAAAAAGTATTTAGT",2,8.47,6,-4.76,2,3,1.06,0,">1 nonsynonymous","Y91D D97L Y121D L131K",4
"lib1","SARS-CoV-2","TTAAAAAGTGGACATG",5,8.63,8.56,-2.2,0.23,1.5,1,0.03,">1 nonsynonymous","G9N F99A",2
"lib1","SARS-CoV-2","TTAAAAATAAATGACC",3,48.25,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","K48R G83E I88N L188V",4
"lib1","SARS-CoV-2","TTAAAAATCATCGCCT",3,5.99,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","C6S D98V V103N G116R",4
"lib1","SARS-CoV-2","TTAAAAATCTAACCTT",2,56.34,9.74,-1.02,0.11,2.19,1.02,0.01,">1 nonsynonymous","F8C T148G G196R",3
"lib1","SARS-CoV-2","TTAAAAATCTATTTAT",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C A33H F44R",3
"lib1","SARS-CoV-2","TTAAAAATGAAAACAA",3,52.89,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K87S F99N G152T F167M V173S K198V",6
"lib1","SARS-CoV-2","TTAAAAATGCCCTAGG",2,82.48,10.06,-0.7,0.07,2.92,1,0,">1 nonsynonymous","I2F I142A",2
"lib1","SARS-CoV-2","TTAAAAATGTTGATGA",3,18.56,6.49,-4.27,0.85,1.5,1.25,0.05,">1 nonsynonymous","G101D C158D",2
"lib1","SARS-CoV-2","TTAAAAATTACATTTC",8,49.08,10.62,-0.14,0.1,2.8,1.11,0,">1 nonsynonymous","P149F F160H",2
"lib1","SARS-CoV-2","TTAAAACAAAACTCTA",3,68.82,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50N I142D G152M",3
"lib1","SARS-CoV-2","TTAAAACAAGATGGGG",7,0,NA,NA,NA,NA,NA,NA,"stop","F8Y V37* F156T",3
"lib1","SARS-CoV-2","TTAAAACAATCACCGT",3,22.34,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19T V37T T55I I104C G146W",5
"lib1","SARS-CoV-2","TTAAAACACCAGGCAC",3,39,10.7,-0.06,0.07,2.95,1,0,">1 nonsynonymous","K56N D98S S129A I138E",4
"lib1","SARS-CoV-2","TTAAAACAGTTAAGGG",6,93.21,10.24,-0.52,0.05,2.71,1.03,0,">1 nonsynonymous","N13A P54E",2
"lib1","SARS-CoV-2","TTAAAACATAATACAG",7,145.83,10.72,-0.04,0.05,2.95,1.02,0,"1 nonsynonymous","H189L",1
"lib1","SARS-CoV-2","TTAAAACATCTCTTCA",1,13.23,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","R73L A105Y G117T",3
"lib1","SARS-CoV-2","TTAAAACCCCCGTCAG",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36K G74C",2
"lib1","SARS-CoV-2","TTAAAACCTCAAACAT",3,174.62,9.29,-1.47,0.06,2.81,1.13,0,"1 nonsynonymous","G117V",1
"lib1","SARS-CoV-2","TTAAAACGTAGTCCAA",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E G117S E141T R179D",4
"lib1","SARS-CoV-2","TTAAAACTAGACTCAC",6,68.04,8.54,-2.23,0.14,1.5,1.09,0.01,">1 nonsynonymous","D97L W106C G174S L187A",4
"lib1","SARS-CoV-2","TTAAAACTGAAACATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","TTAAAACTGCATTTCC",6,61.43,10.1,-0.67,0.06,2.84,1,0,">1 nonsynonymous","K48A Y121M",2
"lib1","SARS-CoV-2","TTAAAACTGTAACTTG",2,47.35,10.73,-0.04,0.08,2.96,1.04,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","TTAAAACTTACCACAA",1,30.22,10.08,-0.69,0.11,2.36,1.02,0,">1 nonsynonymous","A33R T55I K199L",3
"lib1","SARS-CoV-2","TTAAAAGAAATATATT",2,62.52,10.79,0.03,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAAAGAAGCAACAT",5,47.9,6.52,-4.25,0.53,1.5,1.27,0.03,">1 nonsynonymous","C6S A14T Y119H R136F Q144M T201P",6
"lib1","SARS-CoV-2","TTAAAAGACGCTAACC",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L I28P T100A G146R",4
"lib1","SARS-CoV-2","TTAAAAGACTAAATCA",6,3.7,NA,NA,NA,NA,NA,NA,"stop","I2C D59* P96L G166W",4
"lib1","SARS-CoV-2","TTAAAAGAGTAGTTGC",5,60.21,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","E135S F167R",2
"lib1","SARS-CoV-2","TTAAAAGATTTCCGAA",1,12.84,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","Y66R N118R D137R P177N",4
"lib1","SARS-CoV-2","TTAAAAGCCAGATTTC",12,81.71,10.44,-0.32,0.07,2.85,1.04,0,">1 nonsynonymous","S36R N120W",2
"lib1","SARS-CoV-2","TTAAAAGCCCCTACCT",8,9.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19Q D34I A42W G116L E141C",5
"lib1","SARS-CoV-2","TTAAAAGCGCTTGTAC",4,17.93,10.14,-0.62,0.29,1.5,1.16,0.05,">1 nonsynonymous","L5N K94V D98S",3
"lib1","SARS-CoV-2","TTAAAAGGAAGATAAA",4,42.92,10.42,-0.34,0.07,2.82,1.01,0,">1 nonsynonymous","G51F L122S V153R",3
"lib1","SARS-CoV-2","TTAAAAGGTATTGTTG",3,9.61,6,-4.76,1.18,3,1.11,0.01,">1 nonsynonymous","D34P A42S Y91M G101A E141R",5
"lib1","SARS-CoV-2","TTAAAAGGTTATAAAT",1,18.49,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44S S53C P96S F167C",4
"lib1","SARS-CoV-2","TTAAAAGTCACGCAAT",8,94.12,10.36,-0.41,0.05,2.87,1,0,">1 nonsynonymous","Y123C L188P",2
"lib1","SARS-CoV-2","TTAAAATAAAAAATTA",1,9.7,10.3,-0.47,0.13,2.03,1.06,0.01,"1 nonsynonymous","V77F",1
"lib1","SARS-CoV-2","TTAAAATAAAAAGTAA",13,139.29,9.48,-1.29,0.07,2.75,1.12,0,"1 nonsynonymous","G174V",1
"lib1","SARS-CoV-2","TTAAAATAAAAGACTA",4,10.11,6.01,-4.75,1.71,3,1.24,0.03,">1 nonsynonymous","P7Y T100P",2
"lib1","SARS-CoV-2","TTAAAATAAAATCCTC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","Y121* G146L",2
"lib1","SARS-CoV-2","TTAAAATAAAATCGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y121* G146L",2
"lib1","SARS-CoV-2","TTAAAATAAAATTTAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","V37L Y50S Y91R V115F Y178* K199M",6
"lib1","SARS-CoV-2","TTAAAATAAAGGGTCG",4,70.73,10.25,-0.52,0.06,2.87,1,0,">1 nonsynonymous","L57M F134L",2
"lib1","SARS-CoV-2","TTAAAATAAATTAACC",4,51.43,9.49,-1.27,0.09,2.87,1.08,0,"1 nonsynonymous","F126Y",1
"lib1","SARS-CoV-2","TTAAAATAACAACATG",4,22.14,10.11,-0.66,0.14,2.57,1.11,0.01,">1 nonsynonymous","N13R L95V",2
"lib1","SARS-CoV-2","TTAAAATATAGGAAAT",2,13.4,10.93,0.16,0.11,2.77,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAAAATATTGGGTTA",4,28.81,10.67,-0.09,0.03,2.99,1,0,"1 nonsynonymous","N40M",1
"lib1","SARS-CoV-2","TTAAAATATTTTATAG",2,14.89,6,-4.76,2,3,1.22,0.02,">1 nonsynonymous","V77S Q84S G166W V173L",4
"lib1","SARS-CoV-2","TTAAAATCAAAAAGGT",1,5.96,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A89Q N107I T140P",3
"lib1","SARS-CoV-2","TTAAAATCAACAGGGA",3,66.08,10.81,0.05,0.09,2.84,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAAAATCACCATCAT",5,18.13,NA,NA,NA,NA,NA,NA,"stop","F126* F160A L183N",3
"lib1","SARS-CoV-2","TTAAAATCTCCCGTAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D I80G Q84F G155A Q176A",5
"lib1","SARS-CoV-2","TTAAAATGAAAACCTT",5,55.94,10.58,-0.19,0.05,2.86,1.07,0,"1 nonsynonymous","E186V",1
"lib1","SARS-CoV-2","TTAAAATGAACCAATA",12,54.97,7.3,-3.46,0.24,1.5,1.15,0.01,">1 nonsynonymous","T3Y S139I Q168C",3
"lib1","SARS-CoV-2","TTAAAATGAATTTACT",5,22.63,6,-4.76,0.5,2.24,1.07,0,">1 nonsynonymous","C49A N64H Y119A",3
"lib1","SARS-CoV-2","TTAAAATGACCCGACA",1,20.73,6,-4.76,2,3,1.37,0.01,">1 nonsynonymous","C31R F47S T63Q A145T",4
"lib1","SARS-CoV-2","TTAAAATGACTTACTT",1,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84E",1
"lib1","SARS-CoV-2","TTAAAATGCATAACAC",2,46.49,10.76,0,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAAATGCCGAATAC",6,95.84,9.78,-0.99,0.05,2.83,1.05,0,">1 nonsynonymous","L60T A145E G196I",3
"lib1","SARS-CoV-2","TTAAAATGGTAGGACA",1,34.64,10.56,-0.2,0.04,2.91,1.02,0,">1 nonsynonymous","T85R D90R",2
"lib1","SARS-CoV-2","TTAAAATGTAACTAAA",1,17.38,6.36,-4.41,0.81,1.5,1.2,0.03,">1 nonsynonymous","T3Y G83R D90S P96F T148P G174C P191N",7
"lib1","SARS-CoV-2","TTAAAATTAGTTTTAG",4,135.16,10.44,-0.33,0.04,2.93,1.04,0,">1 nonsynonymous","T140R F156Y",2
"lib1","SARS-CoV-2","TTAAAATTCCATATTA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150I V181S",2
"lib1","SARS-CoV-2","TTAAAATTGGCAAAAT",2,94.57,8.45,-2.31,0.12,2.21,1.08,0,">1 nonsynonymous","G83V T100V G174V",3
"lib1","SARS-CoV-2","TTAAACAAAAAACAGA",6,9.03,11.03,0.26,0.11,2.89,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAACAAAAAAGGCC",1,20.62,10.65,-0.11,0.07,2.86,1.13,0,"1 nonsynonymous","V153S",1
"lib1","SARS-CoV-2","TTAAACAAAATACCCC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","Y35G T46Q L60F S113G Y119G G166* S200N",7
"lib1","SARS-CoV-2","TTAAACAAAGCCACTG",6,6.85,10.38,-0.39,0.18,2.89,1.07,0.01,">1 nonsynonymous","D59G T85S",2
"lib1","SARS-CoV-2","TTAAACAAATGGGCTT",2,24.23,7.84,-2.92,0.35,1.5,1.06,0.04,">1 nonsynonymous","W23Q S139D",2
"lib1","SARS-CoV-2","TTAAACAAATTGCTAC",3,0.85,NA,NA,NA,NA,NA,NA,"stop","T15F R127*",2
"lib1","SARS-CoV-2","TTAAACAACACATGAA",4,50.98,10.79,0.03,0.08,2.89,1.06,0,"1 nonsynonymous","T100F",1
"lib1","SARS-CoV-2","TTAAACAAGTGCAAAA",4,29.96,6,-4.76,1.94,1.5,1.24,0.02,">1 nonsynonymous","Y91S Y119D E135Y",3
"lib1","SARS-CoV-2","TTAAACAATATTAGTT",4,125.94,10.56,-0.2,0.05,2.94,1,0,">1 nonsynonymous","T3R T85F",2
"lib1","SARS-CoV-2","TTAAACAATTTTTAAG",4,30.95,6.83,-3.93,0.56,1.5,1.04,0.05,">1 nonsynonymous","G86W I104H",2
"lib1","SARS-CoV-2","TTAAACACAACTGAAA",2,16.6,7.68,-3.09,0.34,1.71,1.21,0.05,">1 nonsynonymous","K48N N107T G116H",3
"lib1","SARS-CoV-2","TTAAACACCCAACGCA",1,20.01,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","S113M E141T G146P",3
"lib1","SARS-CoV-2","TTAAACACCTTCGTGC",2,40.24,8.33,-2.43,0.18,2.44,1.08,0.01,">1 nonsynonymous","C61N L125K N130W",3
"lib1","SARS-CoV-2","TTAAACACGACAAGGA",4,25.92,6.06,-4.7,1.9,1.5,1.19,0.04,">1 nonsynonymous","F70R F99L",2
"lib1","SARS-CoV-2","TTAAACAGCCAGCCAA",7,19.26,9.74,-1.03,0.14,2.19,1.07,0.01,">1 nonsynonymous","S41F Y165W P191K",3
"lib1","SARS-CoV-2","TTAAACAGCGGGGTTA",2,19.76,10.64,-0.12,0.06,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAACAGGGTAGAAG",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I T100Y",2
"lib1","SARS-CoV-2","TTAAACAGGTCTGCAG",1,61.7,6.79,-3.98,0.19,1.84,1.11,0.01,">1 nonsynonymous","A14S K128S Y143G",3
"lib1","SARS-CoV-2","TTAAACAGTATTAGTT",3,10.1,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","R124L C158S",2
"lib1","SARS-CoV-2","TTAAACATCAAGGGTG",1,1.93,NA,NA,NA,NA,NA,NA,"stop","A33L N107G Y175*",3
"lib1","SARS-CoV-2","TTAAACATGTCCCAAA",2,8.9,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N13Y Y39Q K56V P96E S139M",5
"lib1","SARS-CoV-2","TTAAACCAATGAGGGG",3,46.98,8.87,-1.89,0.27,1.5,1.07,0.03,">1 nonsynonymous","N58L Q79T L122V",3
"lib1","SARS-CoV-2","TTAAACCACCAGATAG",7,72.74,10.21,-0.55,0.07,2.73,1.03,0,">1 nonsynonymous","T15L E141R",2
"lib1","SARS-CoV-2","TTAAACCACGGTACTA",1,18.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A D90L F99S Y119R I138F",5
"lib1","SARS-CoV-2","TTAAACCATATTTTAG",2,9.16,8.72,-2.05,0.31,1.5,1,0.04,">1 nonsynonymous","S41Y F62L Q79G T100H N130D",5
"lib1","SARS-CoV-2","TTAAACCATTAAGAAG",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K R127S Y178I",3
"lib1","SARS-CoV-2","TTAAACCATTACTACT",3,17.57,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C6V F99Y Y119L L125P A145L",5
"lib1","SARS-CoV-2","TTAAACCCCTGTACCC",8,57.39,10.19,-0.57,0.06,2.92,1.03,0,">1 nonsynonymous","T85S E141N P149L G174Q",4
"lib1","SARS-CoV-2","TTAAACCCTAGCGGAG",11,155.89,9.79,-0.97,0.13,1.88,1.09,0.01,">1 nonsynonymous","N13I R27T",2
"lib1","SARS-CoV-2","TTAAACCCTAGTAGAA",3,4.74,NA,NA,NA,NA,NA,NA,"stop","K87* C150N Y178N",3
"lib1","SARS-CoV-2","TTAAACCCTCTGTAGG",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y A105S S113E S147Y V181G",5
"lib1","SARS-CoV-2","TTAAACCCTTACCAGC",2,61.79,9.88,-0.89,0.09,2,1,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","TTAAACCGCTCGCACT",5,45.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","V77A F134R G166F",3
"lib1","SARS-CoV-2","TTAAACCGGATAGTAA",3,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A K199L",2
"lib1","SARS-CoV-2","TTAAACCTAAAAGAAA",6,114.69,10.57,-0.2,0.02,2.95,1,0,"1 nonsynonymous","E10P",1
"lib1","SARS-CoV-2","TTAAACCTAGAACCCT",1,49.44,9.87,-0.89,0.1,2.68,1.03,0,">1 nonsynonymous","V37D G83S S164L",3
"lib1","SARS-CoV-2","TTAAACCTAGATCCAA",1,5.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2Y D112Q N120I E141Y",4
"lib1","SARS-CoV-2","TTAAACCTAGCAGGCA",7,23.97,7.14,-3.62,0.47,1.5,1.12,0.05,">1 nonsynonymous","C49K S129V K199F",3
"lib1","SARS-CoV-2","TTAAACCTATTCTATT",2,9.89,6,-4.76,2,2.29,1.22,0.01,">1 nonsynonymous","P96L G146K",2
"lib1","SARS-CoV-2","TTAAACCTCGTAACAG",3,36.65,10.64,-0.12,0.04,2.92,1.03,0,">1 nonsynonymous","D98P E154T",2
"lib1","SARS-CoV-2","TTAAACGACAAATGTG",5,102.44,8.47,-2.29,0.11,2.61,1.08,0,">1 nonsynonymous","A33F N110H Y175M",3
"lib1","SARS-CoV-2","TTAAACGACCATCCCT",9,147.97,10.45,-0.31,0.03,2.9,1.04,0,">1 nonsynonymous","E186L K199S",2
"lib1","SARS-CoV-2","TTAAACGATATTATTG",1,74.43,10.72,-0.04,0.05,2.91,1.03,0,">1 nonsynonymous","P7L V37F G152S",3
"lib1","SARS-CoV-2","TTAAACGCGAGAAAAA",5,162.6,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","C6S F12I F156V Q176S",4
"lib1","SARS-CoV-2","TTAAACGCTATGAGAA",5,79.46,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F70Q D90H G155A F160H T201S",5
"lib1","SARS-CoV-2","TTAAACGGGACGATAT",4,54.07,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","L38Q G116L R136V",3
"lib1","SARS-CoV-2","TTAAACGGTGTTTTAT",9,91.17,10.82,0.05,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAACGTAAAAAATA",1,12.51,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","N4I L38S K94T K114G",4
"lib1","SARS-CoV-2","TTAAACGTATTCCATA",5,47.18,9.07,-1.69,0.16,1.73,1.19,0.01,">1 nonsynonymous","V11A E141A E154N",3
"lib1","SARS-CoV-2","TTAAACGTGACCATAT",3,7.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2F K87S D112E G146Y",4
"lib1","SARS-CoV-2","TTAAACGTGATGCCTC",2,135.94,10.83,0.06,0.06,2.92,1.01,0,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","TTAAACTAAAAGAGAA",3,56.18,9.2,-1.57,0.05,2.89,1.06,0,"1 nonsynonymous","G166L",1
"lib1","SARS-CoV-2","TTAAACTAAATCCTTA",4,14.18,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R73L G83R S139E N151F",4
"lib1","SARS-CoV-2","TTAAACTACTTGAGCT",2,40.6,10.76,-0.01,0.05,2.93,1.04,0,">1 nonsynonymous","S29R P54Q",2
"lib1","SARS-CoV-2","TTAAACTATTGCACCA",2,55.58,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R124L L131M P149Q G174T",4
"lib1","SARS-CoV-2","TTAAACTCTATCTATG",4,28.89,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","V103Y G146E F156D Q168V V182L",5
"lib1","SARS-CoV-2","TTAAACTGAATGAAAT",2,26.19,8.74,-2.03,0.25,1.5,1.1,0.03,">1 nonsynonymous","N13C F44S G116T",3
"lib1","SARS-CoV-2","TTAAACTGATCAACAT",2,48.65,9.71,-1.05,0.11,1.8,1.06,0.01,"1 nonsynonymous","W23V",1
"lib1","SARS-CoV-2","TTAAACTTAGAGGGCA",12,116.1,9.33,-1.43,0.09,2.07,1.08,0,">1 nonsynonymous","N107K T140G",2
"lib1","SARS-CoV-2","TTAAACTTTCCGAGAA",6,23.67,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","G9K R25T C49T I80S D97S G116M",6
"lib1","SARS-CoV-2","TTAAAGAAAATGTGGT",2,2.56,NA,NA,NA,NA,NA,NA,"stop","N4D Y50N R127*",3
"lib1","SARS-CoV-2","TTAAAGAAGCAATGTA",1,8.56,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","E10S N64P F70E S184H",4
"lib1","SARS-CoV-2","TTAAAGACAAACTAGG",17,95.46,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L5F Y91S F99S V115R",4
"lib1","SARS-CoV-2","TTAAAGACAATGCGAA",10,6.01,NA,NA,NA,NA,NA,NA,"stop","S41L K94H V103* Y123M G155E",5
"lib1","SARS-CoV-2","TTAAAGACAGAGCCAT",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122V S139V R179A",3
"lib1","SARS-CoV-2","TTAAAGACCAGAGCAC",1,9.72,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","K94E N151S E154R",3
"lib1","SARS-CoV-2","TTAAAGAGGAACAACA",4,657.78,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C158I T201P",2
"lib1","SARS-CoV-2","TTAAAGAGGCGGTAGC",2,18.05,6.02,-4.74,0.86,1.5,1.11,0.01,">1 nonsynonymous","P82Y W106G T140A",3
"lib1","SARS-CoV-2","TTAAAGATACTAGTTT",2,0.53,NA,NA,NA,NA,NA,NA,"stop","F8S S19* K56G D90H V103D",5
"lib1","SARS-CoV-2","TTAAAGATACTTTCCA",5,20.99,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","I72F S129H P149K",3
"lib1","SARS-CoV-2","TTAAAGATGTCTATAA",2,30.19,10.96,0.2,0.07,2.97,1,0,"1 nonsynonymous","V37F",1
"lib1","SARS-CoV-2","TTAAAGATTATGTAAA",2,54.81,6,-4.76,2,3,1.17,0,">1 nonsynonymous","F12E Y50L L60N Y143R Q176W",5
"lib1","SARS-CoV-2","TTAAAGATTCGAGGCT",9,4.8,NA,NA,NA,NA,NA,NA,"stop","A81* Y93K G116Y S139G N157F",5
"lib1","SARS-CoV-2","TTAAAGATTCTCCTCC",2,9.38,10.34,-0.42,0.07,2.94,1.05,0.01,">1 nonsynonymous","G9K S129E E141W T201L",4
"lib1","SARS-CoV-2","TTAAAGCAAAGACGAA",4,123.41,10.66,-0.1,0.04,2.89,1.04,0,">1 nonsynonymous","A14E K56T L122S",3
"lib1","SARS-CoV-2","TTAAAGCACAATTTGC",9,94.15,10.46,-0.3,0.06,2.88,1,0,"1 nonsynonymous","S36C",1
"lib1","SARS-CoV-2","TTAAAGCAGTCAACAA",7,160.04,10.56,-0.21,0.05,2.81,1.04,0,">1 nonsynonymous","L5A V71L",2
"lib1","SARS-CoV-2","TTAAAGCATACAACTA",2,59.14,10.18,-0.58,0.06,2.86,1,0,">1 nonsynonymous","K56T A81T N120D",3
"lib1","SARS-CoV-2","TTAAAGCATGAAGTTG",4,41.11,10.74,-0.02,0.07,2.9,1.03,0,"1 nonsynonymous","K198V",1
"lib1","SARS-CoV-2","TTAAAGCCGAATGTAA",6,158.89,10.42,-0.34,0.04,2.89,1.05,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","TTAAAGCGGGAAATCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","TTAAAGCGTATACACA",3,21.17,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","Y50I V77S P82M",3
"lib1","SARS-CoV-2","TTAAAGCTAACTGTGT",2,32.29,9.33,-1.43,0.17,1.84,1.06,0.01,">1 nonsynonymous","G9E F47S L60G L187C T201L",5
"lib1","SARS-CoV-2","TTAAAGCTCAGGCATC",7,150.11,10.41,-0.35,0.05,2.88,1.03,0,">1 nonsynonymous","S45Y G146S",2
"lib1","SARS-CoV-2","TTAAAGCTCTATATCA",3,66.27,10.56,-0.21,0.06,2.9,1.08,0,"1 nonsynonymous","F134Q",1
"lib1","SARS-CoV-2","TTAAAGGAAGCAAGTA",3,39.01,10.68,-0.09,0.09,2.82,1.14,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAAGGACGGTGAAA",6,118.19,10.52,-0.24,0.05,2.9,1.02,0,"1 nonsynonymous","F12L",1
"lib1","SARS-CoV-2","TTAAAGGCAGTATTAG",13,71.09,6,-4.76,2,3,1.17,0,">1 nonsynonymous","E135R L162S",2
"lib1","SARS-CoV-2","TTAAAGGCGATTTCAG",11,76.32,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N4F G86V T140C G174M",4
"lib1","SARS-CoV-2","TTAAAGGCTAAGGTTA",2,128.89,10.09,-0.67,0.08,2.18,1.02,0,">1 nonsynonymous","I104S V173Y",2
"lib1","SARS-CoV-2","TTAAAGGGGTGAAACA",3,59.88,10.94,0.17,0.09,2.96,1.01,0,">1 nonsynonymous","V37L K199V",2
"lib1","SARS-CoV-2","TTAAAGGTATTTCTAT",11,100.45,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F12N G51L C61F W106P",4
"lib1","SARS-CoV-2","TTAAAGTAAATAACTA",3,16.01,6.33,-4.44,0.93,1.5,1.14,0.05,">1 nonsynonymous","E10T S29T K48T K94P I104S G172L",6
"lib1","SARS-CoV-2","TTAAAGTAATAACCCA",3,7.36,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","G83N V182E",2
"lib1","SARS-CoV-2","TTAAAGTCCATTATAT",3,104.55,10.68,-0.09,0.03,2.98,1,0,">1 nonsynonymous","Y39R N58T",2
"lib1","SARS-CoV-2","TTAAAGTCTAATTAAT",3,15.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20L L162T",2
"lib1","SARS-CoV-2","TTAAAGTCTGATCTAG",11,188.48,10.49,-0.27,0.04,2.9,1.05,0,">1 nonsynonymous","G9L R27K I142M N151H",4
"lib1","SARS-CoV-2","TTAAAGTGACTACTAA",1,27.42,6.82,-3.95,0.61,1.5,1.14,0.05,">1 nonsynonymous","P7T S43K P96H W106V",4
"lib1","SARS-CoV-2","TTAAAGTGGAAAAAAT",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67V I80A P96C F156V",4
"lib1","SARS-CoV-2","TTAAAGTGTATCAAAG",4,54.24,9.2,-1.57,0.14,2.31,1.14,0.01,"1 nonsynonymous","S113L",1
"lib1","SARS-CoV-2","TTAAAGTGTCACGGTT",3,35.25,9.77,-0.99,0.08,2.85,1.04,0,"1 nonsynonymous","G146R",1
"lib1","SARS-CoV-2","TTAAAGTTATCGCCAG",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I G83V",2
"lib1","SARS-CoV-2","TTAAAGTTATTTCATG",12,219.86,10.73,-0.04,0.05,2.89,1.04,0,"1 nonsynonymous","V173D",1
"lib1","SARS-CoV-2","TTAAATAAAAATACCA",1,42.05,10.77,0,0.1,2.88,1.05,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","TTAAATAAAACATTGT",3,8.17,6.15,-4.62,0.49,3,1.21,0.01,">1 nonsynonymous","T85R L95W L183S T201H",4
"lib1","SARS-CoV-2","TTAAATAAAACTAAGC",11,70.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28M F99S A105S A145Q",4
"lib1","SARS-CoV-2","TTAAATAAAATCGTTA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","T15* P82K L122S K198S",4
"lib1","SARS-CoV-2","TTAAATAAAATTAATA",1,47.89,9.24,-1.53,0.17,1.94,1.12,0.01,">1 nonsynonymous","N24L N120T",2
"lib1","SARS-CoV-2","TTAAATAAACCTGTGC",1,9.57,6.36,-4.41,0.71,1.5,1.18,0.04,">1 nonsynonymous","A33R G86D",2
"lib1","SARS-CoV-2","TTAAATAAATCATCAG",1,30.67,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","T3G V37G R78K P82L L111F K132L",6
"lib1","SARS-CoV-2","TTAAATAACGAGAGGT",4,21.73,10.74,-0.02,0.04,2.94,1.04,0,"1 nonsynonymous","K132S",1
"lib1","SARS-CoV-2","TTAAATAACGCCGAGA",3,47.83,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N40M K56A G101L",3
"lib1","SARS-CoV-2","TTAAATAACTTACAAA",1,8.14,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","G51F G86Y L125Y P149L S164V",5
"lib1","SARS-CoV-2","TTAAATAAGCTCATAC",1,1.63,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAAATAATACTGATA",1,17.44,10.6,-0.16,0.11,2.73,1.17,0,"1 nonsynonymous","L125F",1
"lib1","SARS-CoV-2","TTAAATAATATATTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8L V103* Y165I",3
"lib1","SARS-CoV-2","TTAAATAATTGCACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10H S29Y F44L W106* N157Y",5
"lib1","SARS-CoV-2","TTAAATACAAACTTTA",5,45.6,6,-4.76,1.44,1.5,1.17,0.02,">1 nonsynonymous","W23C G51K I104W G117Q E135V",5
"lib1","SARS-CoV-2","TTAAATACAGTGGCGC",1,26.92,10.82,0.05,0.09,2.77,1.12,0,">1 nonsynonymous","L131V T201K",2
"lib1","SARS-CoV-2","TTAAATACATGGCAGT",7,81.23,10.59,-0.18,0.04,2.89,1.08,0,"1 nonsynonymous","G116S",1
"lib1","SARS-CoV-2","TTAAATACCGACTGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* D59V V77G S113L L122G",5
"lib1","SARS-CoV-2","TTAAATACGGGTAGCG",1,44.84,8.53,-2.23,0.26,1.5,1.01,0.03,">1 nonsynonymous","V32Y D68E K128N E141D",4
"lib1","SARS-CoV-2","TTAAATACGGTCGATT",18,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L V103P A145C G174S V182A",5
"lib1","SARS-CoV-2","TTAAATACGTCCGACC",1,22.13,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59A N107V Y119R D137A T201D",5
"lib1","SARS-CoV-2","TTAAATACTTAACGAA",1,11.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88C T170A",2
"lib1","SARS-CoV-2","TTAAATAGAACGATAA",7,122.99,10.18,-0.58,0.02,2.92,1.03,0,">1 nonsynonymous","Y35M E135S G174S",3
"lib1","SARS-CoV-2","TTAAATAGACATCCAC",2,38.27,10.39,-0.37,0.06,2.98,1,0,">1 nonsynonymous","K87M T140A",2
"lib1","SARS-CoV-2","TTAAATAGACGATGAT",1,10.95,10.55,-0.22,0.12,2.91,1.09,0,">1 nonsynonymous","S53H C61G",2
"lib1","SARS-CoV-2","TTAAATAGCGGAGTGA",2,47.71,10.75,-0.01,0.06,2.9,1.02,0,">1 nonsynonymous","T3I C61A T201A",3
"lib1","SARS-CoV-2","TTAAATATAAAAGAAA",2,20.58,9.86,-0.9,0.1,2.37,1.05,0,">1 nonsynonymous","V181M S200L",2
"lib1","SARS-CoV-2","TTAAATATAATTTACT",4,47.93,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I88R L95G Y121Q K128H",4
"lib1","SARS-CoV-2","TTAAATATAGAGAAAA",1,9.11,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","S41P P82H K199V",3
"lib1","SARS-CoV-2","TTAAATATAGAGGCTA",3,11.58,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F70L D97E K114D Y119L I138S F156K",6
"lib1","SARS-CoV-2","TTAAATATATTCAGAA",4,41.54,10.63,-0.13,0.05,2.95,1,0,"1 nonsynonymous","V103I",1
"lib1","SARS-CoV-2","TTAAATATCATACGGG",7,24.49,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","T3D F44K C49S A81T D97W",5
"lib1","SARS-CoV-2","TTAAATATCATTGACA",12,117.57,10.44,-0.32,0.05,2.85,1.04,0,"1 nonsynonymous","A14D",1
"lib1","SARS-CoV-2","TTAAATATCGATTTAG",2,28.75,6,-4.76,1.87,1.5,1.3,0.04,">1 nonsynonymous","E10P Y121L I142V Y143S T201L",5
"lib1","SARS-CoV-2","TTAAATATCTCGCGAA",5,259.79,8.35,-2.41,0.15,1.88,1.11,0.01,">1 nonsynonymous","N107L Q176L",2
"lib1","SARS-CoV-2","TTAAATATCTCTAGGG",27,330.57,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I138Y F167C K198E",3
"lib1","SARS-CoV-2","TTAAATATGACTTTTG",9,155.01,10.77,0.01,0.05,2.92,1.02,0,"1 nonsynonymous","S36R",1
"lib1","SARS-CoV-2","TTAAATATGGACGTCT",4,30.34,6.09,-4.67,0.82,1.5,1.18,0.02,">1 nonsynonymous","S36R T85E A89S V103T L125K",5
"lib1","SARS-CoV-2","TTAAATATTATGTATA",2,25.65,10.78,0.02,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAATATTTAATTAC",2,11.45,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","L5D N92T Y119L R136H Q168V",5
"lib1","SARS-CoV-2","TTAAATCACAAAATAT",1,14.43,11.07,0.31,0.09,2.93,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAAATCACCTTTAAA",3,17.84,9.3,-1.47,0.1,2.76,1.03,0.01,">1 nonsynonymous","K87E K128F",2
"lib1","SARS-CoV-2","TTAAATCACTGCCCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33T T85M N120*",3
"lib1","SARS-CoV-2","TTAAATCAGGTACATT",14,1.99,NA,NA,NA,NA,NA,NA,"stop","S36L Y119*",2
"lib1","SARS-CoV-2","TTAAATCATATAGGAG",6,148.01,10.77,0.01,0.08,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAATCCAAACTAAG",2,13.03,10.8,0.03,0.11,2.94,1.04,0,"1 nonsynonymous","V115S",1
"lib1","SARS-CoV-2","TTAAATCCAAATGCGG",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Y A42L D97R V103Y N130A I138M",6
"lib1","SARS-CoV-2","TTAAATCCATCAACAT",2,60.76,6.82,-3.94,0.55,1.5,1.09,0.05,">1 nonsynonymous","K48W D68E D90Y",3
"lib1","SARS-CoV-2","TTAAATCCCGGTACTT",1,14.16,9.76,-1,0.17,2.24,1,0.01,"1 nonsynonymous","F12T",1
"lib1","SARS-CoV-2","TTAAATCCGGCGACAC",3,56.25,10.79,0.03,0.12,2.91,1.06,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TTAAATCCTAAATCTG",1,38.79,10.77,0.01,0.08,2.83,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAATCGATGCTATA",1,17.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R Y143H",2
"lib1","SARS-CoV-2","TTAAATCGTAGAAGAT",2,7.12,6,-4.76,1.47,1.5,1.13,0.05,">1 nonsynonymous","Y50L Q144K L187Q",3
"lib1","SARS-CoV-2","TTAAATCGTGTTATCC",1,60.41,10.8,0.04,0.05,2.97,1,0,">1 nonsynonymous","K128N K199M",2
"lib1","SARS-CoV-2","TTAAATCTATCCACGA",1,7.4,6,-4.76,2,1.5,1.06,0.06,">1 nonsynonymous","D68W G146E Q168H",3
"lib1","SARS-CoV-2","TTAAATCTCTCATCAA",1,35.27,6.97,-3.8,0.35,1.5,1.21,0.02,">1 nonsynonymous","S41A C61D I88V Y123C G146S A190T",6
"lib1","SARS-CoV-2","TTAAATGACCTCACCA",2,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F N13I Q84V N157Y T201P",5
"lib1","SARS-CoV-2","TTAAATGACGGAGGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","A81G P96C T201*",3
"lib1","SARS-CoV-2","TTAAATGATACGATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","P96T N118* F134D F167Y G174Y",5
"lib1","SARS-CoV-2","TTAAATGATTCCGGTT",2,4.96,NA,NA,NA,NA,NA,NA,"stop","P7* F44V Y121I A192Q",4
"lib1","SARS-CoV-2","TTAAATGATTTTTTAT",3,72.44,10.78,0.01,0.06,2.92,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAAATGCAACGAGAC",2,1.76,NA,NA,NA,NA,NA,NA,"stop","C49L L95* I104* T201E",4
"lib1","SARS-CoV-2","TTAAATGCAAGAATTC",3,81.98,8.45,-2.31,0.14,1.8,1.1,0.01,">1 nonsynonymous","Y121R P149V Y175F",3
"lib1","SARS-CoV-2","TTAAATGCCGTAATGT",4,1,NA,NA,NA,NA,NA,NA,"stop","N40P W106* Y123G G155V",4
"lib1","SARS-CoV-2","TTAAATGCTACTGCGA",4,55.55,10.73,-0.03,0.05,2.88,1.07,0,">1 nonsynonymous","K56D L122E T148N",3
"lib1","SARS-CoV-2","TTAAATGCTAGATCTA",2,21.96,8.97,-1.8,0.29,1.5,1.13,0.03,">1 nonsynonymous","F44Y N120L L162T",3
"lib1","SARS-CoV-2","TTAAATGGACGAGATC",3,53.2,10.83,0.06,0.09,2.91,1.05,0,"1 nonsynonymous","K198M",1
"lib1","SARS-CoV-2","TTAAATGGTTTGCCTA",5,6.24,10.43,-0.33,0.4,2.66,1.14,0.04,">1 nonsynonymous","E10A L131I F160W",3
"lib1","SARS-CoV-2","TTAAATGTAAAAAAGG",2,21.45,6.02,-4.74,1.12,1.5,1.15,0.02,">1 nonsynonymous","D90I F99P Y119G D137N",4
"lib1","SARS-CoV-2","TTAAATGTACAGCTGA",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33F I80M G86H N107Y K198V",5
"lib1","SARS-CoV-2","TTAAATGTCACAAAGG",4,44.59,8.94,-1.83,0.08,2.9,1.1,0,">1 nonsynonymous","Y119T F156R",2
"lib1","SARS-CoV-2","TTAAATGTGAAAGTAA",5,42.79,9.83,-0.94,0.11,2.22,1.07,0,">1 nonsynonymous","Y21T S45Q",2
"lib1","SARS-CoV-2","TTAAATTAACGGCATA",3,17.02,6,-4.76,2,1.5,1.05,0.01,"1 nonsynonymous","G74P",1
"lib1","SARS-CoV-2","TTAAATTAAGAAACAG",2,1.8,NA,NA,NA,NA,NA,NA,"stop","K56* T63C A67G",3
"lib1","SARS-CoV-2","TTAAATTAAGCTCTGG",3,0.65,NA,NA,NA,NA,NA,NA,"stop","T85* Y91G S113D C150Y",4
"lib1","SARS-CoV-2","TTAAATTACACACTCT",2,12.54,6.35,-4.41,0.38,1.5,1.05,0.03,">1 nonsynonymous","T63D A89T D90V N109G",4
"lib1","SARS-CoV-2","TTAAATTACAGACGTT",4,36.68,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","S29T G86A V180F",3
"lib1","SARS-CoV-2","TTAAATTATGATCTAA",3,25,7.2,-3.56,0.35,1.5,1.22,0.03,">1 nonsynonymous","R27N S45G P96M",3
"lib1","SARS-CoV-2","TTAAATTCACTGGCCA",2,61.24,10.19,-0.57,0.06,2.91,1,0,"1 nonsynonymous","G155L",1
"lib1","SARS-CoV-2","TTAAATTCATTGCCTA",4,104.08,10.67,-0.09,0.04,2.97,1,0,"1 nonsynonymous","Y143H",1
"lib1","SARS-CoV-2","TTAAATTCCTAACCCT",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89F Y121L",2
"lib1","SARS-CoV-2","TTAAATTCGCCGATTG",2,59.34,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","I2A I28S F44S L60S I80K Y119R A145T P149K",8
"lib1","SARS-CoV-2","TTAAATTGTATTGAAA",11,199.18,10.77,0.01,0.06,2.86,1.07,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","TTAAATTGTCAGAATA",4,67.78,10.79,0.03,0.06,2.94,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAATTTAAAAGATA",4,14.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50P F62V F70I T201S",4
"lib1","SARS-CoV-2","TTAAATTTAACAACTC",8,64.71,6.78,-3.98,0.3,1.5,1.13,0.02,"1 nonsynonymous","K94W",1
"lib1","SARS-CoV-2","TTAAATTTAGTTTTTG",4,19.4,10.86,0.1,0.13,2.8,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAACAAAAACAGATT",13,83.71,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F44S L57T V77K T85L",4
"lib1","SARS-CoV-2","TTAACAAAAATATGTT",2,49.87,10.44,-0.33,0.12,2.73,1.16,0.01,"1 nonsynonymous","V115E",1
"lib1","SARS-CoV-2","TTAACAAAACTCAAAA",2,44.23,10.23,-0.54,0.09,2.58,1.01,0,"1 nonsynonymous","Y121R",1
"lib1","SARS-CoV-2","TTAACAAACTAACCAT",1,27.83,9.83,-0.93,0.15,2.08,1,0.01,">1 nonsynonymous","A89I N109K",2
"lib1","SARS-CoV-2","TTAACAAAGAATTAAA",1,22.73,10.7,-0.06,0.06,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACAAATGAACAAT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","A14* Y39K D90N S108Y G117V P149L F167L",7
"lib1","SARS-CoV-2","TTAACAAATGCCGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75L Y91M L122E",3
"lib1","SARS-CoV-2","TTAACAAATTCCTTTA",7,1.99,NA,NA,NA,NA,NA,NA,"stop","T63* E135P",2
"lib1","SARS-CoV-2","TTAACAACAAGCTCTA",1,65.92,10.75,-0.02,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACAACATAAAATT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","R25T S41G Q176* T201L",4
"lib1","SARS-CoV-2","TTAACAACCAGGTCGC",4,37.1,6.01,-4.76,1.14,1.5,1.19,0.02,">1 nonsynonymous","P149G V181S",2
"lib1","SARS-CoV-2","TTAACAACTTACCGGA",14,189.52,10.78,0.01,0.08,2.89,1.04,0,"1 nonsynonymous","E141N",1
"lib1","SARS-CoV-2","TTAACAAGACTGGAGT",1,11.35,9.08,-1.68,0.23,1.5,1.08,0.06,">1 nonsynonymous","W23V F44I",2
"lib1","SARS-CoV-2","TTAACAAGATACACGG",2,7.59,10.3,-0.46,0.16,2.69,1,0.01,">1 nonsynonymous","D34Y L122V",2
"lib1","SARS-CoV-2","TTAACAAGCTGTATCT",4,14.15,8.41,-2.36,0.25,1.5,1.1,0.04,">1 nonsynonymous","V71L F185T",2
"lib1","SARS-CoV-2","TTAACAAGTGCCAGTA",3,75.7,10.08,-0.68,0.06,2.72,1.02,0,"1 nonsynonymous","A105M",1
"lib1","SARS-CoV-2","TTAACAAGTTAGAATA",8,32.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8M T15A I88V D112V N157M V173A V182H",7
"lib1","SARS-CoV-2","TTAACAATAAAAATAT",2,86.09,10.04,-0.72,0.09,2.31,1.02,0,">1 nonsynonymous","F8I K26M N110R E141L",4
"lib1","SARS-CoV-2","TTAACAATACAAAATA",5,43,10.39,-0.38,0.08,2.87,1.09,0,">1 nonsynonymous","I2M A89T",2
"lib1","SARS-CoV-2","TTAACAATACGCTGTT",3,54.54,10.75,-0.01,0.07,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACAATACGTTTTC",6,27.58,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K87L V180Q T201L",3
"lib1","SARS-CoV-2","TTAACAATATACTTAG",3,18.61,6.08,-4.68,0.52,1.5,1.1,0.01,">1 nonsynonymous","V65I A89M E135W T148Y",4
"lib1","SARS-CoV-2","TTAACAATATATTAAT",10,142.54,10.72,-0.05,0.06,2.89,1.08,0,"1 nonsynonymous","T15S",1
"lib1","SARS-CoV-2","TTAACAATTCTGTCAT",12,91.74,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","P7C R124L",2
"lib1","SARS-CoV-2","TTAACACAAATTAGGG",5,27.06,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","N107Q G116R N120R C158Y P169Y K198V",6
"lib1","SARS-CoV-2","TTAACACAAGATCACT",1,16.95,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1F F99D N107L G146R",4
"lib1","SARS-CoV-2","TTAACACATGAATATG",1,255.7,10.23,-0.53,0.03,2.83,1.03,0,"1 nonsynonymous","Y35H",1
"lib1","SARS-CoV-2","TTAACACCCCAACATT",9,226.88,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61L D98A G101D Y143K Q176Y",5
"lib1","SARS-CoV-2","TTAACACGCATAAAAC",1,5.86,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S53T L60K F70T E76K Q168L",5
"lib1","SARS-CoV-2","TTAACACGGAGACTGG",2,66.3,10.81,0.05,0.06,2.93,1,0,"1 nonsynonymous","A190G",1
"lib1","SARS-CoV-2","TTAACACGGTAGCATG",6,47.77,10.85,0.08,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACACTATTTCATC",6,0.99,NA,NA,NA,NA,NA,NA,"stop","V32K N64K V71* T170A",4
"lib1","SARS-CoV-2","TTAACACTCACTCGAT",2,16.13,6,-4.76,2,3,1.25,0.02,">1 nonsynonymous","F44A D90K L95T Y119V E186G",5
"lib1","SARS-CoV-2","TTAACAGAACAACGGG",1,16.51,9.86,-0.91,0.12,2.58,1,0.01,">1 nonsynonymous","A81M I142P L187S",3
"lib1","SARS-CoV-2","TTAACAGAGATATTAG",2,37.28,10.45,-0.32,0.06,2.9,1,0,">1 nonsynonymous","F44Y L57M N64V",3
"lib1","SARS-CoV-2","TTAACAGAGTCATTTT",1,20.52,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N13S S19V S53L K198E",4
"lib1","SARS-CoV-2","TTAACAGATCACACGG",1,8.09,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V52R V173I V180S",3
"lib1","SARS-CoV-2","TTAACAGATGCATAGC",1,52.11,10.2,-0.56,0.06,2.91,1,0,">1 nonsynonymous","L125G P149T",2
"lib1","SARS-CoV-2","TTAACAGATGCTGTTC",4,2.69,NA,NA,NA,NA,NA,NA,"stop","I2L G83* D97N S129G",4
"lib1","SARS-CoV-2","TTAACAGCAAATTGCA",1,11.57,10.31,-0.45,0.13,2.37,1.02,0.01,">1 nonsynonymous","A18G P149Q S184F",3
"lib1","SARS-CoV-2","TTAACAGCAACGTTCG",4,218.87,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Y119V P177W",2
"lib1","SARS-CoV-2","TTAACAGCTAAGTACC",6,140.12,9.2,-1.57,0.07,2.63,1.12,0,">1 nonsynonymous","A33V Q176A",2
"lib1","SARS-CoV-2","TTAACAGGAACAGTAC",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F D68Q N118L S184G",4
"lib1","SARS-CoV-2","TTAACAGGCTCAACAA",5,72.55,6.88,-3.89,0.29,1.5,1.13,0.02,">1 nonsynonymous","Y39N C61Y K87D D90L G166A V173P",6
"lib1","SARS-CoV-2","TTAACAGGTATGACGG",8,81.43,7.3,-3.46,0.28,1.5,1.11,0.02,">1 nonsynonymous","L38K D90R G116S",3
"lib1","SARS-CoV-2","TTAACAGTCAATAATT",1,7.16,10.58,-0.18,0.46,2.17,1,0.06,">1 nonsynonymous","P82D G146F P161M",3
"lib1","SARS-CoV-2","TTAACAGTTAACCACC",2,6.68,6.16,-4.6,1.47,1.5,1.12,0.03,">1 nonsynonymous","R78G S129D C158L",3
"lib1","SARS-CoV-2","TTAACATACCCAAAGT",5,60.87,10.63,-0.13,0.04,2.91,1.04,0,">1 nonsynonymous","F126L P149S",2
"lib1","SARS-CoV-2","TTAACATAGCCAGATA",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y R124S K132L N151V",4
"lib1","SARS-CoV-2","TTAACATATATACCGA",12,3.68,NA,NA,NA,NA,NA,NA,"stop","R25G V37*",2
"lib1","SARS-CoV-2","TTAACATCATATATCC",6,57.01,8.44,-2.33,0.14,2.78,1.05,0.01,">1 nonsynonymous","S129D Y175C",2
"lib1","SARS-CoV-2","TTAACATCTTCAAAGT",4,62.97,8.74,-2.03,0.09,2.8,1.05,0,">1 nonsynonymous","D90F F156L G174L",3
"lib1","SARS-CoV-2","TTAACATGAAAAACAT",3,38.65,10.81,0.04,0.08,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACATGACTTACAA",1,15.49,10.1,-0.67,0.06,2.96,1.01,0,">1 nonsynonymous","L122S I142A",2
"lib1","SARS-CoV-2","TTAACATGATGAATAG",7,96.05,10.15,-0.61,0.08,2.64,1.01,0,"1 nonsynonymous","A105C",1
"lib1","SARS-CoV-2","TTAACATTATAATCAT",6,38.08,7.07,-3.7,0.38,1.5,1.12,0.04,">1 nonsynonymous","D34H N118R G174I",3
"lib1","SARS-CoV-2","TTAACATTATGTTTCA",6,95.31,8.46,-2.3,0.18,1.92,1.1,0.01,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","TTAACATTGTACTAAT",4,1.69,NA,NA,NA,NA,NA,NA,"stop","F44* L57S T148Y",3
"lib1","SARS-CoV-2","TTAACATTGTTATCAA",5,48.8,9.76,-1,0.09,2.67,1.12,0,">1 nonsynonymous","V37C A42I G155H",3
"lib1","SARS-CoV-2","TTAACATTTCCTTCAG",10,107,9.96,-0.81,0.1,2.47,1.04,0,">1 nonsynonymous","E10A Y35E",2
"lib1","SARS-CoV-2","TTAACCAAACATTTAG",3,62.09,7.44,-3.32,0.21,1.5,1.12,0.01,">1 nonsynonymous","L5K A81T N118I K199L",4
"lib1","SARS-CoV-2","TTAACCAAACTGCAGG",1,49.11,9.98,-0.78,0.06,2.72,1.02,0,">1 nonsynonymous","D90S Y121F V180I T201F",4
"lib1","SARS-CoV-2","TTAACCAAATGCGGCC",10,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F C49F D68Q K87A T100S",5
"lib1","SARS-CoV-2","TTAACCAACAGAACAA",5,0.84,NA,NA,NA,NA,NA,NA,"stop","P82Q G86K N107S Q163Y G174* L187S",6
"lib1","SARS-CoV-2","TTAACCAATAAAATGT",4,62.57,10.46,-0.31,0.04,2.83,1.05,0,">1 nonsynonymous","V32A S43C N64A T100R",4
"lib1","SARS-CoV-2","TTAACCACAATGTGTT",11,99.93,10.78,0.01,0.04,2.95,1.02,0,"1 nonsynonymous","K48N",1
"lib1","SARS-CoV-2","TTAACCACATTCCAGC",4,69,10.11,-0.65,0.04,2.87,1.01,0,"1 nonsynonymous","C31G",1
"lib1","SARS-CoV-2","TTAACCACCGACAAAT",7,99.88,6.66,-4.1,0.39,1.5,1.23,0.02,">1 nonsynonymous","D59V W106E",2
"lib1","SARS-CoV-2","TTAACCACGAACCCAG",4,80.91,10.75,-0.01,0.08,2.9,1.07,0,"1 nonsynonymous","A190G",1
"lib1","SARS-CoV-2","TTAACCACGATCCAAA",5,24.05,9.53,-1.23,0.22,1.79,1.18,0.02,">1 nonsynonymous","T63S I104T R136V",3
"lib1","SARS-CoV-2","TTAACCACGATCTTAA",3,0.71,NA,NA,NA,NA,NA,NA,"stop","F8G V65P V71G G101E S129*",5
"lib1","SARS-CoV-2","TTAACCAGAGGGACAT",6,91.11,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","N64V G172T",2
"lib1","SARS-CoV-2","TTAACCATAATGCAAT",5,60.46,6,-4.76,2,3,1.09,0,">1 nonsynonymous","P54Y V153K N157D Q176F",4
"lib1","SARS-CoV-2","TTAACCATTAGGCATC",2,51.67,10.46,-0.31,0.05,2.93,1.01,0,">1 nonsynonymous","L60T G116E",2
"lib1","SARS-CoV-2","TTAACCATTTATTTCA",4,6.84,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","N13G P96S Y123E Q168T",4
"lib1","SARS-CoV-2","TTAACCCCCAACATAA",4,10.11,9.93,-0.83,0.34,1.67,1.13,0.07,">1 nonsynonymous","A42P V65M G116V Q144I",4
"lib1","SARS-CoV-2","TTAACCCGTCCTCCAA",7,1.26,NA,NA,NA,NA,NA,NA,"stop","S41K C61T D68T F126Y P149* V180E",6
"lib1","SARS-CoV-2","TTAACCCTAACGAGTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S S41P G83N A89N",4
"lib1","SARS-CoV-2","TTAACCCTATATTCAC",2,14.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P82L Y123W L162W",3
"lib1","SARS-CoV-2","TTAACCCTTCTCTGGT",6,1.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174T",1
"lib1","SARS-CoV-2","TTAACCCTTTGTGACT",3,32.44,10.79,0.03,0.06,2.88,1.06,0,">1 nonsynonymous","P149F T201Q",2
"lib1","SARS-CoV-2","TTAACCGAAATTTAAA",9,127.53,10.72,-0.05,0.08,2.86,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACCGATGGTCACA",2,22.54,8.82,-1.95,0.26,1.5,1.06,0.04,">1 nonsynonymous","A18Y L60R Y123L E135G V173I K198H",6
"lib1","SARS-CoV-2","TTAACCGCGCTAGAAA",8,48.97,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","E141A V181K",2
"lib1","SARS-CoV-2","TTAACCGGAGAATTAC",2,47.23,6,-4.76,1.16,1.5,1.17,0.02,">1 nonsynonymous","V37R G116A F156Y Q176R",4
"lib1","SARS-CoV-2","TTAACCGTCAACAACT",7,111.92,10.78,0.01,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACCGTTTTCAGGC",5,0,NA,NA,NA,NA,NA,NA,"stop","L5Q W106*",2
"lib1","SARS-CoV-2","TTAACCTAACTGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5S D90C Y123A S164G S200*",5
"lib1","SARS-CoV-2","TTAACCTACTAACTAT",1,32.93,6.29,-4.47,0.6,1.5,1.25,0.03,">1 nonsynonymous","R16K L57H V180F",3
"lib1","SARS-CoV-2","TTAACCTACTTAGAGG",4,55.91,10.34,-0.43,0.07,2.72,1,0,"1 nonsynonymous","G152I",1
"lib1","SARS-CoV-2","TTAACCTAGTACCGAA",1,19.17,9.7,-1.06,0.18,1.79,1.14,0.02,">1 nonsynonymous","N4V T15C N120S",3
"lib1","SARS-CoV-2","TTAACCTATACTTACC",1,31.51,9.85,-0.92,0.17,2.14,1.09,0.01,">1 nonsynonymous","K56N L60P P96G",3
"lib1","SARS-CoV-2","TTAACCTATCCCAAAA",1,7.75,10.16,-0.6,0.47,1.63,1.29,0.08,"1 nonsynonymous","G86S",1
"lib1","SARS-CoV-2","TTAACCTATTAAATTT",2,91.82,10.72,-0.04,0.08,2.85,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACCTCAAATATCG",3,6.87,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","F99M R127G",2
"lib1","SARS-CoV-2","TTAACCTCCACTAAAA",1,9.39,10.94,0.17,0.13,2.95,1.02,0,"1 nonsynonymous","L5I",1
"lib1","SARS-CoV-2","TTAACCTGGGTTCAGA",3,9.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N107V S139D",2
"lib1","SARS-CoV-2","TTAACCTGTTACCCTA",2,1.62,NA,NA,NA,NA,NA,NA,"stop","K132* F167G",2
"lib1","SARS-CoV-2","TTAACCTTAAAAATCA",2,67.96,10.64,-0.12,0.05,2.89,1.07,0,">1 nonsynonymous","T100N S200K",2
"lib1","SARS-CoV-2","TTAACCTTAATAATAT",4,0.4,NA,NA,NA,NA,NA,NA,"stop","L5W C49S D59*",3
"lib1","SARS-CoV-2","TTAACCTTCTTCACAC",9,52.81,10.65,-0.12,0.06,2.9,1.04,0,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","TTAACCTTTCAAACCT",1,6.11,8.63,-2.13,0.21,2.75,1.04,0.01,">1 nonsynonymous","E10M G117T G152N",3
"lib1","SARS-CoV-2","TTAACGAAAGCGAGTT",6,39.91,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F62A Q84H W106S E141I",4
"lib1","SARS-CoV-2","TTAACGAAATAAAATT",4,51.57,9.89,-0.88,0.11,2.67,1.14,0.01,">1 nonsynonymous","N120S Q176H",2
"lib1","SARS-CoV-2","TTAACGAACCGAGTAC",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F A42L F62N V103L G155S",5
"lib1","SARS-CoV-2","TTAACGAAGAAAGACA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","D34P S43I K128* G146M S200A",5
"lib1","SARS-CoV-2","TTAACGACCATATCAT",1,10.75,9.96,-0.81,0.14,2.68,1,0.01,">1 nonsynonymous","V11L L60N Y91L P197T",4
"lib1","SARS-CoV-2","TTAACGAGATGCTCAT",5,25.59,9.84,-0.92,0.15,2,1.08,0.01,">1 nonsynonymous","V11N N64T",2
"lib1","SARS-CoV-2","TTAACGAGCCGAAGGT",1,5.68,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35W I80N T85A Y93A Y165D A190S",6
"lib1","SARS-CoV-2","TTAACGATTAAAATTC",4,61.05,10.72,-0.04,0.06,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACGATTAATATAG",1,12.67,10.93,0.17,0.11,2.93,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAACGCACCGCAATA",3,119.01,10.67,-0.09,0.05,2.93,1.05,0,"1 nonsynonymous","G146S",1
"lib1","SARS-CoV-2","TTAACGCCGAAATACG",3,45.44,6.05,-4.72,1.02,1.5,1.15,0.02,">1 nonsynonymous","L60S G86R D137H",3
"lib1","SARS-CoV-2","TTAACGCGCACAACGA",9,21.86,10.44,-0.32,0.05,2.86,1.04,0,">1 nonsynonymous","V32E D90L T100F",3
"lib1","SARS-CoV-2","TTAACGCGCGAATCTT",2,7.54,7.45,-3.32,0.56,1.5,1,0.08,">1 nonsynonymous","P7A C49N K94P Q144L",4
"lib1","SARS-CoV-2","TTAACGCTTACATCTA",8,143.73,7.09,-3.67,0.29,1.5,1.16,0.02,">1 nonsynonymous","T63L Q176I",2
"lib1","SARS-CoV-2","TTAACGCTTATATCGA",3,63.6,10.8,0.04,0.06,2.88,1.06,0,">1 nonsynonymous","N64K T201V",2
"lib1","SARS-CoV-2","TTAACGGAACATCCAA",4,32.54,6,-4.76,2,3,1.15,0,">1 nonsynonymous","R73V F99L",2
"lib1","SARS-CoV-2","TTAACGGAATCGATTT",8,145.76,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5R V71S K87D Y175A",4
"lib1","SARS-CoV-2","TTAACGGACGACTTGA",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F N92H D98S V103E Y119P F156N S184L",7
"lib1","SARS-CoV-2","TTAACGGGTAAGGCTG",3,23.58,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V11E Y91C Y143D",3
"lib1","SARS-CoV-2","TTAACGGTAGGAAATA",9,3.79,NA,NA,NA,NA,NA,NA,"stop","F17P Y175*",2
"lib1","SARS-CoV-2","TTAACGTGATGAAATC",7,0.76,NA,NA,NA,NA,NA,NA,"stop","E10S W106P S113* T201M",4
"lib1","SARS-CoV-2","TTAACGTGGTCACTGA",4,25.08,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T46S D68P D97L F99C T170N",5
"lib1","SARS-CoV-2","TTAACGTTATAACGCG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","A14* G86K F160G Q168K",4
"lib1","SARS-CoV-2","TTAACTAAAAACCCTA",3,69.87,10.73,-0.03,0.09,2.88,1.03,0,"1 nonsynonymous","T3M",1
"lib1","SARS-CoV-2","TTAACTAAAAATTGGG",12,66.17,6.39,-4.37,0.71,1.5,1.17,0.03,">1 nonsynonymous","N1V F12D F44D",3
"lib1","SARS-CoV-2","TTAACTAATATAATGG",4,1.3,NA,NA,NA,NA,NA,NA,"stop","Y21* G51N K128T T140P T148P",5
"lib1","SARS-CoV-2","TTAACTAATCTATACA",11,0.62,NA,NA,NA,NA,NA,NA,"stop","F8* S19Q V37H N118M",4
"lib1","SARS-CoV-2","TTAACTAATGTCGAAA",15,111.52,6.53,-4.24,0.41,1.5,1.21,0.02,">1 nonsynonymous","Y93L G116R",2
"lib1","SARS-CoV-2","TTAACTACAGAAGGCT",10,185.27,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","T100E G152A Y175V",3
"lib1","SARS-CoV-2","TTAACTACGGATGAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68P C158A G172Q",3
"lib1","SARS-CoV-2","TTAACTAGAATAAAAT",2,56.78,9.18,-1.59,0.11,2.57,1.15,0,">1 nonsynonymous","T15Q R27L P54I N171G",4
"lib1","SARS-CoV-2","TTAACTAGATTACATA",3,83.65,10.06,-0.7,0.05,2.53,1.05,0,">1 nonsynonymous","D34Y K114M",2
"lib1","SARS-CoV-2","TTAACTAGTCGACCAC",3,52.26,10.12,-0.65,0.06,2.83,1.02,0,">1 nonsynonymous","F47L D75E",2
"lib1","SARS-CoV-2","TTAACTAGTTGCCATA",4,45.05,8.75,-2.01,0.09,2.91,1.12,0,">1 nonsynonymous","E10A S36K Y119H G174A",4
"lib1","SARS-CoV-2","TTAACTATAAGCCTAA",7,53.67,9.43,-1.33,0.17,1.62,1.12,0.02,">1 nonsynonymous","N4L A14D E141L T201G",4
"lib1","SARS-CoV-2","TTAACTATCCACACCT",8,150.55,9.56,-1.21,0.06,2.82,1.08,0,">1 nonsynonymous","R78H L125G G174P",3
"lib1","SARS-CoV-2","TTAACTCAAACTGTCT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83W K132R",2
"lib1","SARS-CoV-2","TTAACTCAACACATTA",1,18.6,10.54,-0.23,0.07,2.96,1.02,0,"1 nonsynonymous","Y121L",1
"lib1","SARS-CoV-2","TTAACTCAATTAGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib1","SARS-CoV-2","TTAACTCAGGCGATCA",4,14.71,6.85,-3.91,0.35,1.56,1.08,0.02,">1 nonsynonymous","S19K N24E V32L I72K K128R E154L",6
"lib1","SARS-CoV-2","TTAACTCCCTGAGGTC",2,52.83,10.62,-0.15,0.05,2.92,1,0,">1 nonsynonymous","N4L A18N",2
"lib1","SARS-CoV-2","TTAACTCCTTTAGGAC",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R L131V",2
"lib1","SARS-CoV-2","TTAACTCTAGTATCAA",2,47.64,8.9,-1.87,0.21,1.76,1.17,0.02,">1 nonsynonymous","C6G D59W D90M",3
"lib1","SARS-CoV-2","TTAACTCTGAAGCTGA",1,45.69,10.74,-0.02,0.1,2.82,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACTGAAGCGCAAT",2,29.9,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","Y35A C61S I72L P82M D90S V103G Y123F N151K",8
"lib1","SARS-CoV-2","TTAACTGATTTCACAG",2,13.99,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","L5Q Y35V A81S D97F V103H V173I",6
"lib1","SARS-CoV-2","TTAACTGGAACGTGGG",6,135.75,9.86,-0.9,0.05,2.72,1.05,0,">1 nonsynonymous","C6G T85R E141F T201S",4
"lib1","SARS-CoV-2","TTAACTGGCAATGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* F47K D90K D112Y G174I",5
"lib1","SARS-CoV-2","TTAACTGTACGAGAAG",4,6.88,7.97,-2.8,0.21,1.5,1,0.02,">1 nonsynonymous","T3V V20M F99P C150F",4
"lib1","SARS-CoV-2","TTAACTGTACTATACA",5,61.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G9C C158E",2
"lib1","SARS-CoV-2","TTAACTGTTTTAAATC",6,0.45,NA,NA,NA,NA,NA,NA,"stop","F12E S139* Y178A",3
"lib1","SARS-CoV-2","TTAACTTAAATACCAG",2,9.99,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","S113T S129F Q144V F160V",4
"lib1","SARS-CoV-2","TTAACTTAAATGAACG",1,83.14,10.57,-0.2,0.06,2.76,1.06,0,">1 nonsynonymous","C61I K114W",2
"lib1","SARS-CoV-2","TTAACTTAAGTACGCT",7,81.85,10.79,0.03,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACTTATAACGAAA",4,57.21,10.84,0.07,0.12,2.89,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAACTTATTTCAACT",4,33.11,6,-4.76,1.65,1.5,1.15,0.01,">1 nonsynonymous","G9I Y35K N64S I104N",4
"lib1","SARS-CoV-2","TTAACTTGAACTCATG",3,89.27,10.73,-0.03,0.05,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAACTTGCAGCAGTA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","D34* T100P N120Q S129V",4
"lib1","SARS-CoV-2","TTAACTTGTAAGCATA",3,43.18,9.97,-0.79,0.13,2.16,1.02,0.01,">1 nonsynonymous","E10M R16W R27M N120A P149K T201L",6
"lib1","SARS-CoV-2","TTAACTTGTACCGAGG",5,58.6,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L5Y F70W G117L",3
"lib1","SARS-CoV-2","TTAACTTGTTTAAAAT",2,16.08,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","F12Y G83D I88R P96Y D98H N118T G146R",7
"lib1","SARS-CoV-2","TTAACTTTATCTACAG",4,51.75,6.74,-4.02,0.32,1.5,1.22,0.01,">1 nonsynonymous","T3W L38S I142R",3
"lib1","SARS-CoV-2","TTAACTTTTAATACCT",1,16.1,6.66,-4.1,0.69,1.5,1.29,0.06,">1 nonsynonymous","S19R Y91N N130H",3
"lib1","SARS-CoV-2","TTAACTTTTATACTCT",9,40.86,8.19,-2.57,0.23,1.71,1.22,0.02,">1 nonsynonymous","D90V Y119L K198R",3
"lib1","SARS-CoV-2","TTAACTTTTGGCAGAA",1,13.13,6.08,-4.68,0.63,2.14,1.08,0.01,">1 nonsynonymous","Y35T K48R K94L S139A",4
"lib1","SARS-CoV-2","TTAAGAAAAAGTATGT",2,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K S41V E186C",3
"lib1","SARS-CoV-2","TTAAGAAAACCTCGAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99T",1
"lib1","SARS-CoV-2","TTAAGAAATAGGAGCA",1,26.82,9.68,-1.08,0.17,2.01,1.06,0.02,">1 nonsynonymous","K48I T148F Y178L",3
"lib1","SARS-CoV-2","TTAAGAAATATTCATG",1,14.09,10.91,0.14,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGAACAGAGTGCC",4,6.24,10.9,0.14,0.11,3,1.01,0,"1 nonsynonymous","S147T",1
"lib1","SARS-CoV-2","TTAAGAACCCACATAT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","V37P P96M W106* G155N",4
"lib1","SARS-CoV-2","TTAAGAACTCCTTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H A42Y V71L",3
"lib1","SARS-CoV-2","TTAAGAAGAAGCGCGG",3,1.31,NA,NA,NA,NA,NA,NA,"stop","Y35* L122E V181K",3
"lib1","SARS-CoV-2","TTAAGAAGCGACAGTG",3,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P A105L",2
"lib1","SARS-CoV-2","TTAAGAAGTGTCGACG",6,76.52,9.23,-1.53,0.19,1.5,1.16,0.02,">1 nonsynonymous","T3A A14L V20A",3
"lib1","SARS-CoV-2","TTAAGAAGTTAGACCA",2,47.87,6.24,-4.53,0.57,1.5,1.17,0.02,">1 nonsynonymous","D34A N107L",2
"lib1","SARS-CoV-2","TTAAGAATGAGTAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S29* V37*",2
"lib1","SARS-CoV-2","TTAAGAATGGCCAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7* T46Y E76R",3
"lib1","SARS-CoV-2","TTAAGAATTTAAACCA",9,41.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","F8H A105Q E154A",3
"lib1","SARS-CoV-2","TTAAGAATTTAAAGAT",1,9.91,8.32,-2.44,0.4,1.68,1.34,0.06,">1 nonsynonymous","F44W A89Y V173F T201L",4
"lib1","SARS-CoV-2","TTAAGACAAACACTAG",7,71.18,6.13,-4.64,0.69,1.5,1.16,0.01,">1 nonsynonymous","K94N A105V N120C G172R T201G",5
"lib1","SARS-CoV-2","TTAAGACAAGTATGAA",3,19.53,10.52,-0.25,0.08,2.88,1.08,0,">1 nonsynonymous","T55N L122F S129N",3
"lib1","SARS-CoV-2","TTAAGACACATGCGAC",1,3.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGACACGTATATT",6,104.94,10.71,-0.06,0.08,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGACCGGGCCCCG",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H G146W V153C A192K",4
"lib1","SARS-CoV-2","TTAAGACGACTTAACT",4,64.06,10.12,-0.65,0.06,2.68,1.04,0,">1 nonsynonymous","T85C E141L",2
"lib1","SARS-CoV-2","TTAAGACGGCAATTTG",2,18.64,10.76,-0.01,0.07,2.97,1.01,0,">1 nonsynonymous","Y35V L60K",2
"lib1","SARS-CoV-2","TTAAGACGGCCAGCGT",1,8.07,9.75,-1.01,0.17,2.03,1.06,0.02,">1 nonsynonymous","G9A G51I",2
"lib1","SARS-CoV-2","TTAAGACGTTTTACCT",6,18.06,10.12,-0.64,0.07,2.84,1.05,0,">1 nonsynonymous","D90F N120S",2
"lib1","SARS-CoV-2","TTAAGACTAGCCTGAG",7,34.92,6.05,-4.71,0.63,1.5,1.16,0.01,">1 nonsynonymous","F8S P161Y",2
"lib1","SARS-CoV-2","TTAAGAGAATGTAAAG",3,60.75,8.01,-2.76,0.18,1.5,1.1,0.01,">1 nonsynonymous","G9E F17N A192S G196V",4
"lib1","SARS-CoV-2","TTAAGAGACATTCAAA",3,38.38,10.65,-0.11,0.04,2.92,1,0,">1 nonsynonymous","T55P S200R",2
"lib1","SARS-CoV-2","TTAAGAGACTCCAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48E T201Y",2
"lib1","SARS-CoV-2","TTAAGAGAGAATGAGC",2,40.23,10.07,-0.69,0.08,2.66,1.05,0,">1 nonsynonymous","A105Y L187C",2
"lib1","SARS-CoV-2","TTAAGAGATGTAGAAG",5,223.42,10.66,-0.1,0.05,2.93,1.02,0,"1 nonsynonymous","P7T",1
"lib1","SARS-CoV-2","TTAAGAGATTAAATTA",11,2.45,NA,NA,NA,NA,NA,NA,"stop","A81R S113* L187M",3
"lib1","SARS-CoV-2","TTAAGAGCATTCACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28M Y35L T63Y Y91F V103* Y119C R136A G152M",8
"lib1","SARS-CoV-2","TTAAGAGCCATAAGAT",1,21.25,7.84,-2.92,0.27,2.03,1.18,0.02,"1 nonsynonymous","C158R",1
"lib1","SARS-CoV-2","TTAAGAGGTAATTTTG",5,43.34,9.37,-1.39,0.08,2.72,1.17,0,">1 nonsynonymous","I2E Y39T G146D F160I K199N",5
"lib1","SARS-CoV-2","TTAAGAGTGGCTTAAA",5,38.13,6.8,-3.97,0.48,1.5,1.28,0.03,">1 nonsynonymous","D59K F99V N110Y N120D",4
"lib1","SARS-CoV-2","TTAAGAGTGTGCAACC",2,32.98,9.48,-1.28,0.16,1.83,1.14,0.02,">1 nonsynonymous","C6F L60A G83K E135G T201V",5
"lib1","SARS-CoV-2","TTAAGAGTTAAAACTA",6,105.37,7.29,-3.47,0.2,1.5,1.1,0.01,">1 nonsynonymous","C6T R136E",2
"lib1","SARS-CoV-2","TTAAGATAAAGCCGCT",4,71.04,9.71,-1.06,0.08,2.64,1.09,0,">1 nonsynonymous","E10L C61S G116L",3
"lib1","SARS-CoV-2","TTAAGATAACCAAAAT",3,12.2,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y35L T63N L95Q",3
"lib1","SARS-CoV-2","TTAAGATAAGACAAAA",2,39.36,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","D59R G86C N109T T140S L188Y",5
"lib1","SARS-CoV-2","TTAAGATCGACCAAAC",1,11.05,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F12H V37G F62L D90F Y121T",5
"lib1","SARS-CoV-2","TTAAGATGACATCTCA",4,19.44,9.53,-1.24,0.13,1.68,1.08,0.01,">1 nonsynonymous","G9I P96H",2
"lib1","SARS-CoV-2","TTAAGATGGTTCTCAA",4,45.71,6.89,-3.88,0.46,1.5,1.06,0.05,">1 nonsynonymous","V20Q G116H",2
"lib1","SARS-CoV-2","TTAAGATTACTAGATA",2,24.17,6,-4.76,1.17,1.77,1.21,0.03,">1 nonsynonymous","A33N S43R C158V",3
"lib1","SARS-CoV-2","TTAAGATTCCATGCGC",7,117.45,10.64,-0.13,0.05,2.93,1.02,0,">1 nonsynonymous","N58R N110D",2
"lib1","SARS-CoV-2","TTAAGCAAAAAGGCGA",16,253.04,10.82,0.06,0.07,2.91,1.04,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TTAAGCAAATCGCAAC",1,13.86,10.79,0.03,0.07,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGCAAATTCAATG",6,0.63,NA,NA,NA,NA,NA,NA,"stop","N4A P82D A105* T201K",4
"lib1","SARS-CoV-2","TTAAGCAACCCCAAGA",2,9.64,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N1H S41L I80K T148V G166I",5
"lib1","SARS-CoV-2","TTAAGCAGAAGCTTAT",2,7.76,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83P P149F E154D",3
"lib1","SARS-CoV-2","TTAAGCAGATGCCCTT",3,13.3,10.95,0.18,0.13,2.92,1.06,0.01,">1 nonsynonymous","S36E L122M",2
"lib1","SARS-CoV-2","TTAAGCAGCCTGCCGT",3,75.12,9.3,-1.46,0.12,2.48,1.13,0,">1 nonsynonymous","P161T A192K",2
"lib1","SARS-CoV-2","TTAAGCATCCCAGCTG",2,19.38,6,-4.76,2,1.5,1.36,0.06,">1 nonsynonymous","K26F Y91H I104Q V181W",4
"lib1","SARS-CoV-2","TTAAGCATTTTAAAGG",2,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K Y39G P82S P96S F126R",5
"lib1","SARS-CoV-2","TTAAGCCTAACTAAAA",1,12.62,9.19,-1.57,0.34,1.5,1.03,0.07,">1 nonsynonymous","F12W C61H D90S D98S",4
"lib1","SARS-CoV-2","TTAAGCCTAAGAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","R73* Y91M N120I Q163M",4
"lib1","SARS-CoV-2","TTAAGCCTCGCAATTC",8,3.18,NA,NA,NA,NA,NA,NA,"stop","R16S S36M V52* I142F V153R",5
"lib1","SARS-CoV-2","TTAAGCCTCTATGACT",6,2.36,NA,NA,NA,NA,NA,NA,"stop","F12E A67P K87S T140N Y159S F185*",6
"lib1","SARS-CoV-2","TTAAGCGAAGCAGGCA",4,68.41,10.21,-0.55,0.08,2.54,1,0,">1 nonsynonymous","D34G T140R",2
"lib1","SARS-CoV-2","TTAAGCGATCGCGTTG",2,13.11,10.73,-0.04,0.07,2.93,1.06,0,"1 nonsynonymous","S29M",1
"lib1","SARS-CoV-2","TTAAGCGCGACTAAGA",1,12.08,10.17,-0.6,0.11,1.99,1.01,0.01,">1 nonsynonymous","T63K V180M S200L",3
"lib1","SARS-CoV-2","TTAAGCGGATTAATTC",3,37.65,10.73,-0.03,0.07,2.95,1.02,0,">1 nonsynonymous","A81R T201M",2
"lib1","SARS-CoV-2","TTAAGCTACACGCATC",7,155.87,10.79,0.02,0.09,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGCTACGAATTAA",5,41.29,8.04,-2.72,0.16,1.79,1.1,0.01,">1 nonsynonymous","Y35G I142L G166F",3
"lib1","SARS-CoV-2","TTAAGCTATATGGGCT",4,0.31,NA,NA,NA,NA,NA,NA,"stop","R25F F62* F99S L122V",4
"lib1","SARS-CoV-2","TTAAGCTGGCCTACTT",3,12.9,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33V N110D N118D R127L",4
"lib1","SARS-CoV-2","TTAAGCTGTACCGTGG",4,32.06,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","Y93P N120V",2
"lib1","SARS-CoV-2","TTAAGCTTACCTGAAA",1,2.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91G",1
"lib1","SARS-CoV-2","TTAAGCTTGAAATGAG",4,83.58,10.83,0.07,0.06,2.95,1,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","TTAAGGAAACGTATCC",1,26.33,10.22,-0.54,0.09,2.69,1,0,"1 nonsynonymous","D112I",1
"lib1","SARS-CoV-2","TTAAGGAACACCATAC",3,1.3,NA,NA,NA,NA,NA,NA,"stop","S36* Y119K G152S S200L",4
"lib1","SARS-CoV-2","TTAAGGACGGCGATAT",3,20.6,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","F17L Y91K D98L",3
"lib1","SARS-CoV-2","TTAAGGACGTAACACA",7,22.35,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","C6D V103K",2
"lib1","SARS-CoV-2","TTAAGGAGAGAGTCTT",6,56.32,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19L A105Y N120S E154N",4
"lib1","SARS-CoV-2","TTAAGGAGAGCTAAAA",4,34.04,7.36,-3.41,0.26,1.67,1.21,0.02,">1 nonsynonymous","C61H D98E G172S K199M",4
"lib1","SARS-CoV-2","TTAAGGAGGCGACAAC",2,0.72,NA,NA,NA,NA,NA,NA,"stop","N1I E10* S36G V103L D137L G172Q Y175H T201P",8
"lib1","SARS-CoV-2","TTAAGGAGGGCACATT",4,147.02,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D112L Y143I E154V",3
"lib1","SARS-CoV-2","TTAAGGATCTTTTCTC",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N R136F",2
"lib1","SARS-CoV-2","TTAAGGCACAACATAA",1,17.5,10.58,-0.18,0.1,2.65,1.31,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGGCAGATCATAT",4,59.16,10.74,-0.03,0.03,2.9,1.04,0,">1 nonsynonymous","V115R G196V",2
"lib1","SARS-CoV-2","TTAAGGCATTCCCAAA",5,96.68,8.16,-2.61,0.17,1.5,1.14,0.01,">1 nonsynonymous","G74F D98N P149W",3
"lib1","SARS-CoV-2","TTAAGGCGGCATGAAG",4,49.65,10.69,-0.07,0.04,2.95,1.03,0,"1 nonsynonymous","T148L",1
"lib1","SARS-CoV-2","TTAAGGCTAAAAGGAA",2,33.55,8.41,-2.35,0.24,1.88,1.19,0.02,">1 nonsynonymous","P133V G174V",2
"lib1","SARS-CoV-2","TTAAGGCTTTTGAGAT",3,49.85,9.54,-1.22,0.2,2.08,1.16,0.02,">1 nonsynonymous","S29E D97I Y165M",3
"lib1","SARS-CoV-2","TTAAGGGAAAACACTC",5,2.73,NA,NA,NA,NA,NA,NA,"stop","A42T F47A G86Y S113* S200F",5
"lib1","SARS-CoV-2","TTAAGGGATGATACCA",1,9.92,10.6,-0.17,0.16,2.9,1.08,0.01,">1 nonsynonymous","S43R K56D",2
"lib1","SARS-CoV-2","TTAAGGGGCCCGAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S N58L L122M",3
"lib1","SARS-CoV-2","TTAAGGGTGCGGTAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","I2* R16* G146W",3
"lib1","SARS-CoV-2","TTAAGGTAACGTCCGT",1,19.71,7.79,-2.97,0.2,1.95,1.12,0.01,"1 nonsynonymous","F126P",1
"lib1","SARS-CoV-2","TTAAGGTACTGAACTT",5,60.02,10.43,-0.33,0.05,2.91,1.06,0,"1 nonsynonymous","Y123R",1
"lib1","SARS-CoV-2","TTAAGGTATGGTCATT",2,16.64,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","F12W G83W K114G T201H",4
"lib1","SARS-CoV-2","TTAAGGTATTACAATT",1,52.02,10.43,-0.34,0.05,2.93,1,0,">1 nonsynonymous","D90K L125F",2
"lib1","SARS-CoV-2","TTAAGGTATTCCATAG",2,58.75,10.54,-0.23,0.06,2.89,1.04,0,"1 nonsynonymous","G155R",1
"lib1","SARS-CoV-2","TTAAGGTCAACTTCCA",9,81,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","F70E G83A A89C Q168A",4
"lib1","SARS-CoV-2","TTAAGTAAACGACAAT",4,80.86,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6V V20M G83I",3
"lib1","SARS-CoV-2","TTAAGTAAGAATCCAC",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S T100Y",2
"lib1","SARS-CoV-2","TTAAGTAATGGTTCGA",1,7.7,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","S29V R73E V77F A190T",4
"lib1","SARS-CoV-2","TTAAGTACAATATAAG",3,49.6,6.15,-4.61,0.8,1.5,1.26,0.02,">1 nonsynonymous","I2W S53L K87G A105F K199T",5
"lib1","SARS-CoV-2","TTAAGTAGACTCACAA",7,117.05,10.79,0.03,0.06,2.92,1.03,0,"1 nonsynonymous","N130Y",1
"lib1","SARS-CoV-2","TTAAGTAGTTGGAGTT",6,116.24,8.74,-2.02,0.09,2.34,1.08,0,">1 nonsynonymous","N107L K199M",2
"lib1","SARS-CoV-2","TTAAGTATGTTCAGGT",1,8.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107R R124K",2
"lib1","SARS-CoV-2","TTAAGTATTGATTAAA",6,7.15,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","F99S V115K",2
"lib1","SARS-CoV-2","TTAAGTCAAAATGTAT",5,6.62,NA,NA,NA,NA,NA,NA,"stop","V11A S53M C61N D68* T148Y",5
"lib1","SARS-CoV-2","TTAAGTCAACACATTT",4,59.19,8.85,-1.91,0.08,2.78,1.11,0,">1 nonsynonymous","S41N G146I",2
"lib1","SARS-CoV-2","TTAAGTCAGCTAAAAT",2,0.99,NA,NA,NA,NA,NA,NA,"stop","V20M S29* L60M T148V",4
"lib1","SARS-CoV-2","TTAAGTCCAAGTATGC",5,90.56,10.42,-0.35,0.04,2.94,1.01,0,">1 nonsynonymous","A33P Y66M V153S",3
"lib1","SARS-CoV-2","TTAAGTCCATGGACAC",1,29.88,9.09,-1.68,0.14,2.69,1.17,0.01,">1 nonsynonymous","K87I Y121S G152R",3
"lib1","SARS-CoV-2","TTAAGTCGACCAAAGT",3,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGTCGATTGGGAA",2,25.69,10.69,-0.07,0.05,2.91,1.03,0,">1 nonsynonymous","P54L C61P N130V T201K",4
"lib1","SARS-CoV-2","TTAAGTCTAAAACGAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGTCTACAGAGAA",3,82.25,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N58V N107Y Q176H",3
"lib1","SARS-CoV-2","TTAAGTCTCACTTATA",8,0.24,NA,NA,NA,NA,NA,NA,"stop","T15V N58* T170*",3
"lib1","SARS-CoV-2","TTAAGTCTCCTTGTTG",7,78.8,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y93I S129E P177L",3
"lib1","SARS-CoV-2","TTAAGTGAAAGCGCAT",1,28.61,9.65,-1.12,0.12,2.04,1.07,0,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","TTAAGTGAATGAGGAA",6,76.63,10.55,-0.22,0.05,2.94,1.03,0,">1 nonsynonymous","L60T Y91F N151K",3
"lib1","SARS-CoV-2","TTAAGTGACAGAACGA",3,0.98,NA,NA,NA,NA,NA,NA,"stop","R25* N92R F126S D137G E186G",5
"lib1","SARS-CoV-2","TTAAGTGCAAAACGCT",1,12.72,9.04,-1.72,0.27,1.66,1.05,0.04,">1 nonsynonymous","E10T A18P G86A",3
"lib1","SARS-CoV-2","TTAAGTGCCTAAAATT",9,31.23,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","R16Q N92R K128S",3
"lib1","SARS-CoV-2","TTAAGTGTACCAATGG",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I V11T S184P",3
"lib1","SARS-CoV-2","TTAAGTTAACATCCAC",1,22.26,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K56S C150G F185D",3
"lib1","SARS-CoV-2","TTAAGTTACCGATAGG",5,65.2,9.75,-1.01,0.09,1.94,1.08,0,">1 nonsynonymous","L5R N24K P96V",3
"lib1","SARS-CoV-2","TTAAGTTACTAAGACA",3,29.48,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","C31L Y91G P161L",3
"lib1","SARS-CoV-2","TTAAGTTAGCCAAACA",1,34.39,10.59,-0.18,0.29,2.03,1.22,0.04,"wildtype","",0
"lib1","SARS-CoV-2","TTAAGTTATACGAAAG",2,18.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7A T140S Y165N",3
"lib1","SARS-CoV-2","TTAAGTTATGGAGCAA",4,20.98,10.23,-0.53,0.05,2.82,1.07,0,">1 nonsynonymous","T15L A22S P54L",3
"lib1","SARS-CoV-2","TTAAGTTATTGTCGAC",7,136.39,10.39,-0.37,0.03,2.85,1.07,0,">1 nonsynonymous","A42S F47I",2
"lib1","SARS-CoV-2","TTAAGTTATTGTTCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V32W Y50F K56* Y66L",4
"lib1","SARS-CoV-2","TTAAGTTCATGTACAT",7,60.64,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","K48G D112H",2
"lib1","SARS-CoV-2","TTAAGTTCGGATCTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E E141C G155Y",3
"lib1","SARS-CoV-2","TTAAGTTCTCCAGGCA",3,66.06,10.03,-0.74,0.1,2.26,1.01,0.01,"1 nonsynonymous","V77A",1
"lib1","SARS-CoV-2","TTAAGTTGCCTCGGTT",2,2.14,NA,NA,NA,NA,NA,NA,"stop","I28* A42R C61E S113L V173N V182F S200L",7
"lib1","SARS-CoV-2","TTAAGTTTACTCCCTT",5,122.32,10.66,-0.11,0.04,2.87,1.08,0,"1 nonsynonymous","S41C",1
"lib1","SARS-CoV-2","TTAAGTTTATGAAACA",2,16.8,8.9,-1.87,0.22,1.74,1.16,0.04,">1 nonsynonymous","D112I N120F",2
"lib1","SARS-CoV-2","TTAATAAAAACAATCC",6,65.98,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","G172W",1
"lib1","SARS-CoV-2","TTAATAAAAAGCTAGA",1,16.67,10.65,-0.11,0.04,2.96,1.01,0,"1 nonsynonymous","T140I",1
"lib1","SARS-CoV-2","TTAATAAAAGCTCTGA",5,19.7,6,-4.76,2,3,1.34,0.01,">1 nonsynonymous","G83I E135P A190R S200F",4
"lib1","SARS-CoV-2","TTAATAAAAGTGAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F134N L162*",2
"lib1","SARS-CoV-2","TTAATAAAATAAATTA",9,42.23,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I2S P96E S113R Q163S",4
"lib1","SARS-CoV-2","TTAATAAAATTTGACG",1,16.27,10.08,-0.68,0.15,2.32,1,0.01,">1 nonsynonymous","E10K A33Y T55W I104T R136L",5
"lib1","SARS-CoV-2","TTAATAAACGACGTAC",3,55.01,10.59,-0.18,0.03,2.94,1,0,"1 nonsynonymous","R136M",1
"lib1","SARS-CoV-2","TTAATAAACTACTCCG",4,94.76,9.9,-0.87,0.09,2.14,1.1,0,"1 nonsynonymous","S19K",1
"lib1","SARS-CoV-2","TTAATAAACTCAAACA",4,30.15,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","Y35S S41I A89D K199S",4
"lib1","SARS-CoV-2","TTAATAAAGCGTATCG",1,41.09,9.58,-1.19,0.19,1.73,1.1,0.02,">1 nonsynonymous","Y50K L187T",2
"lib1","SARS-CoV-2","TTAATAAAGCTCAAAT",2,52.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y175L L183V",2
"lib1","SARS-CoV-2","TTAATAAATACCGTGA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S19R Q84V T85M D98G I104*",5
"lib1","SARS-CoV-2","TTAATAACAATAGAAA",3,35.09,10.55,-0.21,0.05,2.88,1.07,0,">1 nonsynonymous","I2A G155S T201M",3
"lib1","SARS-CoV-2","TTAATAACCGAATTTA",2,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L A33T K48G Y91M D112A G146K E154W F185R",8
"lib1","SARS-CoV-2","TTAATAACCTCAACAC",2,0.41,NA,NA,NA,NA,NA,NA,"stop","V37S S45R I88S T140M Q168*",5
"lib1","SARS-CoV-2","TTAATAACTTAACTAT",1,31.79,7.62,-3.15,0.2,1.88,1.12,0.01,">1 nonsynonymous","S36F L95M N118K",3
"lib1","SARS-CoV-2","TTAATAAGCTCATTAC",6,62.63,6,-4.76,0.81,1.5,1.15,0.01,">1 nonsynonymous","P7S T46Y D75K L95A",4
"lib1","SARS-CoV-2","TTAATAAGGACGAACA",4,100.02,10.02,-0.75,0.05,2.86,1.06,0,">1 nonsynonymous","K56E C61N Q168T",3
"lib1","SARS-CoV-2","TTAATAAGGGCCCATG",5,28.74,10.02,-0.75,0.22,1.67,1.04,0.03,">1 nonsynonymous","T3Q F12Y S129M T201L",4
"lib1","SARS-CoV-2","TTAATAAGGTTCAACA",2,78.68,8.31,-2.46,0.19,2.19,1.08,0.01,">1 nonsynonymous","E10M C61M A145R G174P",4
"lib1","SARS-CoV-2","TTAATAATAAAGTGAG",7,41.9,6.53,-4.24,0.46,1.5,1.17,0.03,">1 nonsynonymous","T63C I138R Q144T G166R",4
"lib1","SARS-CoV-2","TTAATAATAAATTCCG",8,62.75,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F44I T55S I72D S129L E135Y K199S",6
"lib1","SARS-CoV-2","TTAATAATCAAGGCTT",2,27.04,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","Y50K T148I F156E Q168S",4
"lib1","SARS-CoV-2","TTAATAATCGATTATA",2,1500.07,8.07,-2.69,0.2,1.5,1.05,0.01,">1 nonsynonymous","I88L S139C",2
"lib1","SARS-CoV-2","TTAATAATTACGTAGT",8,105.27,10,-0.76,0.07,2.39,1.06,0,">1 nonsynonymous","N58Y I138G L187Q",3
"lib1","SARS-CoV-2","TTAATAATTCGGCGAA",6,53.89,9.89,-0.87,0.11,2.15,1.05,0.01,"1 nonsynonymous","D137S",1
"lib1","SARS-CoV-2","TTAATACAAGACTATC",1,14.29,6,-4.76,2,1.5,1.13,0.05,">1 nonsynonymous","V77G N110S Y165C F167R G174A T201L",6
"lib1","SARS-CoV-2","TTAATACACACCCTAG",5,148.11,10.6,-0.16,0.04,2.87,1.04,0,">1 nonsynonymous","N24S Y66F T140F",3
"lib1","SARS-CoV-2","TTAATACACAGACATG",2,35.43,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","F17N V37S C102Q F185I",4
"lib1","SARS-CoV-2","TTAATACAGACTCCAG",1,3.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96F",1
"lib1","SARS-CoV-2","TTAATACAGCGTATAA",1,46.82,10.47,-0.3,0.07,2.88,1.02,0,"1 nonsynonymous","Y178S",1
"lib1","SARS-CoV-2","TTAATACAGGCTAAAT",5,110.96,10.73,-0.04,0.07,2.95,1.04,0,"1 nonsynonymous","N151L",1
"lib1","SARS-CoV-2","TTAATACCCTTTACGT",2,72.06,10.19,-0.57,0.05,2.85,1.03,0,">1 nonsynonymous","W106F N151S",2
"lib1","SARS-CoV-2","TTAATACCGGCGTAAA",2,47.33,10.74,-0.02,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATACGACCCAAAA",1,13.18,6,-4.76,1.38,3,1.14,0.01,">1 nonsynonymous","N1I S29L V37W P82S Q144D T170M G172S",7
"lib1","SARS-CoV-2","TTAATACGCCGAAATA",6,86.3,10.27,-0.5,0.03,2.83,1,0,"1 nonsynonymous","Y35N",1
"lib1","SARS-CoV-2","TTAATACGCTCACATG",5,2.21,NA,NA,NA,NA,NA,NA,"stop","F12Q V32* L60S A192T",4
"lib1","SARS-CoV-2","TTAATACGGGTTTCCA",3,85.41,10.64,-0.13,0.06,2.9,1.05,0,">1 nonsynonymous","S45E P54V S147Y",3
"lib1","SARS-CoV-2","TTAATACTAATGGAAC",2,9.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44S T55C V103N T140F",4
"lib1","SARS-CoV-2","TTAATACTACGATGCT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L Y35P D97G R136Y N151K",5
"lib1","SARS-CoV-2","TTAATACTACTGAAAT",2,15.82,10.69,-0.07,0.38,1.5,1,0.07,">1 nonsynonymous","N1D T15A T63H A89G",4
"lib1","SARS-CoV-2","TTAATACTCGGATAAT",2,39.06,8.91,-1.85,0.14,2.54,1.2,0.01,">1 nonsynonymous","Y35P F160P G174L",3
"lib1","SARS-CoV-2","TTAATAGAACACCTGC",3,1.23,NA,NA,NA,NA,NA,NA,"stop","L38N Y159*",2
"lib1","SARS-CoV-2","TTAATAGAACGAGTAA",5,57.01,10.46,-0.3,0.05,2.87,1.05,0,">1 nonsynonymous","L122T S129L G152S T201L",4
"lib1","SARS-CoV-2","TTAATAGAAGTCCAGG",1,16.34,6.75,-4.02,0.4,1.5,1.12,0.03,"1 nonsynonymous","V181Q",1
"lib1","SARS-CoV-2","TTAATAGATGGCTGTA",4,12.74,6,-4.76,2,3,1.18,0.05,">1 nonsynonymous","T3G D59E T63N K94E V173N G196R",6
"lib1","SARS-CoV-2","TTAATAGCCTGCATTT",3,40.94,10.06,-0.7,0.05,2.93,1.01,0,">1 nonsynonymous","E141G F156S",2
"lib1","SARS-CoV-2","TTAATAGGGCAATTAG",2,34.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y N107V",2
"lib1","SARS-CoV-2","TTAATAGGTATGTAAG",3,15.89,7.75,-3.01,0.22,1.53,1.17,0.02,">1 nonsynonymous","Y121W Y143M T201W",3
"lib1","SARS-CoV-2","TTAATAGTTACAAACA",8,176.52,10.55,-0.22,0.03,2.96,1.01,0,">1 nonsynonymous","W23Y S147A",2
"lib1","SARS-CoV-2","TTAATATAAAACCGAA",14,86.91,10.11,-0.66,0.06,2.04,1,0,">1 nonsynonymous","L60V W106K",2
"lib1","SARS-CoV-2","TTAATATAATTAATCC",1,14,6.32,-4.45,0.38,1.6,1.12,0.01,">1 nonsynonymous","V77L S108P P149H",3
"lib1","SARS-CoV-2","TTAATATACCCTACCA",1,10.32,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","N58Y I80F G86A C150W",4
"lib1","SARS-CoV-2","TTAATATAGTAAAAAT",5,68.25,8.79,-1.98,0.23,1.5,1.02,0.03,">1 nonsynonymous","F12E G116Y",2
"lib1","SARS-CoV-2","TTAATATATAAAATTT",3,89.32,10.53,-0.23,0.03,2.92,1,0,">1 nonsynonymous","F8L D34N",2
"lib1","SARS-CoV-2","TTAATATATAGATCGC",3,17.84,8.41,-2.35,0.31,1.73,1.1,0.04,">1 nonsynonymous","R27G S43V Y66C Y119F",4
"lib1","SARS-CoV-2","TTAATATATCCCGAAT",2,14.06,8.5,-2.26,0.4,1.5,1.05,0.08,">1 nonsynonymous","L57C S129N V181L",3
"lib1","SARS-CoV-2","TTAATATCAATATACA",6,87.11,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L60T D68K K94Q K114E",4
"lib1","SARS-CoV-2","TTAATATCACGTGTCC",3,28.68,10.44,-0.32,0.05,2.91,1,0,">1 nonsynonymous","T100S A190V",2
"lib1","SARS-CoV-2","TTAATATCACTTTGAT",10,92.89,9.35,-1.42,0.06,2.81,1.13,0,"1 nonsynonymous","Q168I",1
"lib1","SARS-CoV-2","TTAATATCCATTCCTA",2,21.14,8.6,-2.17,0.28,1.72,1.16,0.03,">1 nonsynonymous","F44Y N120L L162T",3
"lib1","SARS-CoV-2","TTAATATCCCTCTGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116L E135I A145S",3
"lib1","SARS-CoV-2","TTAATATCGCTGTCCA",4,13.4,10.57,-0.19,0.13,2.89,1,0.01,">1 nonsynonymous","V65L T148S",2
"lib1","SARS-CoV-2","TTAATATCTGAGAAAA",2,5.04,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A33M A81Y D98H G166W",4
"lib1","SARS-CoV-2","TTAATATGAAACAAGA",2,6.25,6,-4.76,2,3,1,0,">1 nonsynonymous","D68F V77N",2
"lib1","SARS-CoV-2","TTAATATGAACATTTG",5,98.26,10.6,-0.16,0.07,2.87,1.04,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","TTAATATGGCAGTAAA",2,84.64,9.92,-0.84,0.07,2.25,1.04,0,">1 nonsynonymous","S19A F44A",2
"lib1","SARS-CoV-2","TTAATATGGGCCGGAT",5,86.32,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F126D S139K Y165F",3
"lib1","SARS-CoV-2","TTAATATGTAAACAAA",4,82.76,7.99,-2.77,0.2,1.84,1.13,0.01,">1 nonsynonymous","E154Y P177S",2
"lib1","SARS-CoV-2","TTAATATGTAAAGATA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","N118V T148* V173I",3
"lib1","SARS-CoV-2","TTAATATTCAAGGTAG",1,14.67,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","R73F N107V T170S",3
"lib1","SARS-CoV-2","TTAATATTCTGGACAC",2,68.52,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A33E N58R K128E D137R Q176N L188R",6
"lib1","SARS-CoV-2","TTAATATTTCTCACCT",3,10.2,10.78,0.01,0.08,2.93,1,0,"1 nonsynonymous","D97F",1
"lib1","SARS-CoV-2","TTAATATTTCTGAACG",3,8.56,10.42,-0.35,0.28,1.85,1.02,0.04,">1 nonsynonymous","N13H I104T T148S V153E K198F",5
"lib1","SARS-CoV-2","TTAATATTTGAGATAG",5,22.68,10.73,-0.04,0.05,3,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATCAAATCTACCA",8,36.54,6,-4.76,2,1.5,1.23,0.03,"1 nonsynonymous","V103D",1
"lib1","SARS-CoV-2","TTAATCAACCATCATC",1,21.69,10.7,-0.07,0.06,2.92,1.04,0,"1 nonsynonymous","G116Q",1
"lib1","SARS-CoV-2","TTAATCAATAACTCCT",1,68.58,9.39,-1.38,0.15,1.72,1.1,0.01,"1 nonsynonymous","Y50Q",1
"lib1","SARS-CoV-2","TTAATCAATCAGTCCA",5,45.72,9.57,-1.2,0.17,1.97,1.13,0.01,">1 nonsynonymous","Y39H K132F E141Y T148I",4
"lib1","SARS-CoV-2","TTAATCAATTTACACA",1,69.37,8.17,-2.59,0.19,2.3,1.16,0.01,">1 nonsynonymous","V32S G116I A145F",3
"lib1","SARS-CoV-2","TTAATCAATTTATCCC",5,0.74,NA,NA,NA,NA,NA,NA,"stop","C49* P82L",2
"lib1","SARS-CoV-2","TTAATCACATTAACCG",2,31.71,10.22,-0.54,0.1,2.79,1.04,0.01,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","TTAATCACGGAACAAT",3,7.67,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","V65L V71E A145I",3
"lib1","SARS-CoV-2","TTAATCACGGATGGGT",5,156.05,8.48,-2.28,0.17,1.99,1.14,0.01,">1 nonsynonymous","L60A W106M Y119T",3
"lib1","SARS-CoV-2","TTAATCACTAATGGCG",5,72.99,9.07,-1.69,0.07,2.77,1.12,0,">1 nonsynonymous","G117M V173F",2
"lib1","SARS-CoV-2","TTAATCACTATTCAAA",3,9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y93M N110K Y175F",3
"lib1","SARS-CoV-2","TTAATCAGACTCATTG",9,139.61,8.61,-2.15,0.26,1.71,1.19,0.02,">1 nonsynonymous","I2W D90F G116C",3
"lib1","SARS-CoV-2","TTAATCAGTAAGAAAT",5,56.18,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D90I L131S T140S S147C",4
"lib1","SARS-CoV-2","TTAATCAGTGCTTCTC",3,59.55,9.45,-1.32,0.2,1.6,1.08,0.01,">1 nonsynonymous","F47I Y178R",2
"lib1","SARS-CoV-2","TTAATCATCCTAACAT",5,61.67,6,-4.76,0.67,1.5,1.14,0.01,">1 nonsynonymous","Y50D G146I",2
"lib1","SARS-CoV-2","TTAATCATCGACCGCT",3,64.93,10.85,0.08,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATCATGGAACTAT",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N G117L",2
"lib1","SARS-CoV-2","TTAATCATGGGCTCCA",2,1.28,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","TTAATCATGTAAGGGC",3,50.28,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y66D V103L G146Y",3
"lib1","SARS-CoV-2","TTAATCATGTATATTT",3,11.17,6,-4.76,2,3,1.15,0,">1 nonsynonymous","A22K C49V Y119L G146M T201S",5
"lib1","SARS-CoV-2","TTAATCCACTAACAAA",3,1.06,NA,NA,NA,NA,NA,NA,"stop","G9* T201V",2
"lib1","SARS-CoV-2","TTAATCCACTGCACAA",1,26.99,10.63,-0.13,0.07,2.88,1.1,0,"1 nonsynonymous","S200N",1
"lib1","SARS-CoV-2","TTAATCCACTGGCATG",4,33.83,6,-4.76,1.88,1.5,1.19,0.07,">1 nonsynonymous","V52P L122K F167D",3
"lib1","SARS-CoV-2","TTAATCCCAACTATAG",4,87.14,8.44,-2.32,0.1,2.37,1.08,0,">1 nonsynonymous","C61M S69W Y119H C195F",4
"lib1","SARS-CoV-2","TTAATCCCTTAGCCAA",5,3.38,NA,NA,NA,NA,NA,NA,"stop","Q84* V103F K128R",3
"lib1","SARS-CoV-2","TTAATCCGCTTACATC",3,0.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37A",1
"lib1","SARS-CoV-2","TTAATCCGCTTAGGCA",5,10.34,6,-4.76,2,1.5,1.37,0.06,"1 nonsynonymous","I80W",1
"lib1","SARS-CoV-2","TTAATCCGTTCTAGGG",1,1.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I28K",1
"lib1","SARS-CoV-2","TTAATCCTACTAAAAT",6,64.13,6.84,-3.92,0.28,1.5,1.13,0.01,">1 nonsynonymous","P177G S184I T201A",3
"lib1","SARS-CoV-2","TTAATCGCAAAGTCCA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F N58K R78H G86P Q163M T201L",6
"lib1","SARS-CoV-2","TTAATCGCAATTATAA",1,16.91,9.12,-1.64,0.18,1.73,1.1,0.02,">1 nonsynonymous","F99H T148F K199L",3
"lib1","SARS-CoV-2","TTAATCGCTCCACAAA",3,2.08,NA,NA,NA,NA,NA,NA,"stop","S45F T85H W106* G155W G174W",5
"lib1","SARS-CoV-2","TTAATCGTACAGGCAA",5,85.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","F12Y D34K C49V I88S D97N S129V E141S",7
"lib1","SARS-CoV-2","TTAATCTCATATTAAT",1,5.66,6.17,-4.6,0.24,1.6,1.02,0,">1 nonsynonymous","L60A Q84P G196W",3
"lib1","SARS-CoV-2","TTAATCTCCATTAGTA",3,83.33,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A105C G117S L162T",3
"lib1","SARS-CoV-2","TTAATCTCCCCAAGAC",5,68.73,8.92,-1.84,0.19,1.62,1.16,0.01,">1 nonsynonymous","S19K G116T V173N",3
"lib1","SARS-CoV-2","TTAATCTCGATCCATT",3,34.44,10.56,-0.21,0.06,2.8,1.08,0,">1 nonsynonymous","K56T N64S F160I T201N",4
"lib1","SARS-CoV-2","TTAATCTGCTAATAAA",11,37.08,6.45,-4.31,0.78,1.5,1.23,0.04,">1 nonsynonymous","S45T I104N",2
"lib1","SARS-CoV-2","TTAATCTGGAGGTCAC",14,118.32,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y91T C150T",2
"lib1","SARS-CoV-2","TTAATCTGTATCCCTG",5,21.52,10.67,-0.09,0.08,2.87,1.07,0,"1 nonsynonymous","N1S",1
"lib1","SARS-CoV-2","TTAATCTGTCCATAAA",3,64.22,10.47,-0.29,0.03,2.89,1.04,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","TTAATCTTTCATAGAA",3,32.13,6,-4.76,2,3,1.2,0,">1 nonsynonymous","T15R V71M G117Y",3
"lib1","SARS-CoV-2","TTAATGAAAGCTGACC",5,85.35,9.67,-1.09,0.1,2,1.09,0,"1 nonsynonymous","F8S",1
"lib1","SARS-CoV-2","TTAATGAAATCCAATT",6,67.52,9.78,-0.98,0.08,1.91,1.07,0,">1 nonsynonymous","I28N Y35T",2
"lib1","SARS-CoV-2","TTAATGAAGATAACAC",3,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R V103S N157Y",3
"lib1","SARS-CoV-2","TTAATGAAGCGAATTA",8,193.93,10.8,0.04,0.08,2.9,1.06,0,"1 nonsynonymous","G9N",1
"lib1","SARS-CoV-2","TTAATGAAGGTTCAAA",7,1.52,NA,NA,NA,NA,NA,NA,"stop","E76* D97Y G117K",3
"lib1","SARS-CoV-2","TTAATGACAAAAGCTG",9,111.72,10.32,-0.45,0.04,2.9,1,0,">1 nonsynonymous","A14T F62L I104M",3
"lib1","SARS-CoV-2","TTAATGACAAAGATAT",1,18.3,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38F N92R Q168L L187C",4
"lib1","SARS-CoV-2","TTAATGACTAAACGAC",1,23.02,10.23,-0.54,0.15,2.57,1.06,0.01,">1 nonsynonymous","L5R F8L A14V P149L",4
"lib1","SARS-CoV-2","TTAATGACTCCCAATT",4,71.17,10.7,-0.06,0.05,2.96,1.01,0,">1 nonsynonymous","C61Y A190S",2
"lib1","SARS-CoV-2","TTAATGAGAACTAACG",5,120.86,9.48,-1.29,0.07,2.87,1.08,0,">1 nonsynonymous","L5T N157S",2
"lib1","SARS-CoV-2","TTAATGAGAATTCCAC",6,24.27,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N13C P82T G101L W106H",4
"lib1","SARS-CoV-2","TTAATGAGACAAGCAT",4,8.43,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","F99R G117W",2
"lib1","SARS-CoV-2","TTAATGAGACCTTCTT",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C158W L183P",2
"lib1","SARS-CoV-2","TTAATGAGAGACCGGA",1,26.33,6,-4.76,2,1.5,1.37,0.06,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","TTAATGAGTAGCACAT",2,12.32,6.17,-4.59,0.92,1.5,1.2,0.05,">1 nonsynonymous","T63P F167Q Y175L S184A",4
"lib1","SARS-CoV-2","TTAATGAGTGCCTCAA",6,120.63,7.68,-3.08,0.2,1.58,1.16,0.01,">1 nonsynonymous","Y39I V77R Y119L",3
"lib1","SARS-CoV-2","TTAATGATAATAAACC",5,12.83,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","P133Y P161K",2
"lib1","SARS-CoV-2","TTAATGATAATAAATC",1,39.68,6.81,-3.95,0.27,1.5,1.09,0.01,">1 nonsynonymous","F17Q T55C S184K",3
"lib1","SARS-CoV-2","TTAATGATAATGGAAA",3,36.3,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I2E Y35L Y91R N157V Y165S",5
"lib1","SARS-CoV-2","TTAATGATACTACGTT",2,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P S147P",2
"lib1","SARS-CoV-2","TTAATGATCTTTATCG",1,27.15,10.71,-0.06,0.07,2.97,1,0,">1 nonsynonymous","A42K K114E L122R",3
"lib1","SARS-CoV-2","TTAATGCAAAACAGTT",5,48.77,10.75,-0.02,0.04,2.93,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAATGCAAGTCCCAC",2,17.2,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","S41L L95N L131S",3
"lib1","SARS-CoV-2","TTAATGCACCGAGTCC",1,14.4,10.21,-0.55,0.15,2.77,1.14,0.01,">1 nonsynonymous","G116Y T140L",2
"lib1","SARS-CoV-2","TTAATGCCACACCGTG",2,39.02,10.09,-0.68,0.08,2.69,1,0,">1 nonsynonymous","P54S F62D",2
"lib1","SARS-CoV-2","TTAATGCCTAACCAAC",7,90.28,10.26,-0.5,0.05,2.93,1,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","TTAATGCCTGATCAAT",9,73.27,10.78,0.02,0.07,2.9,1.09,0,"1 nonsynonymous","T148F",1
"lib1","SARS-CoV-2","TTAATGCCTTACATTG",5,0.5,NA,NA,NA,NA,NA,NA,"stop","I104* K132G T140W",3
"lib1","SARS-CoV-2","TTAATGCTAAACAAAC",9,175.23,8.3,-2.47,0.12,2.34,1.11,0.01,">1 nonsynonymous","N4F T55D V65I G146V",4
"lib1","SARS-CoV-2","TTAATGCTCCCACACA",7,109.88,10.79,0.03,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATGCTTAATAACA",2,0.69,NA,NA,NA,NA,NA,NA,"stop","I28P G116S T148* Y175G",4
"lib1","SARS-CoV-2","TTAATGGACAAACCTA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","L122* F167R",2
"lib1","SARS-CoV-2","TTAATGGCACTATAAT",1,25.04,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","D59E Y66L G86E T100L Q168V",5
"lib1","SARS-CoV-2","TTAATGGCATATCAAG",3,32.7,8.9,-1.87,0.29,1.5,1.19,0.03,">1 nonsynonymous","C49L L57T Y66I",3
"lib1","SARS-CoV-2","TTAATGGCCAGCGGAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","C61S R73A Y91* V181N",4
"lib1","SARS-CoV-2","TTAATGGCTTGGAAAC",5,25.27,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G86N K94M Y143C",3
"lib1","SARS-CoV-2","TTAATGGGGAACAATA",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D T55Y G146Y G152D",4
"lib1","SARS-CoV-2","TTAATGGGGGGGTATG",2,48.55,10.62,-0.15,0.04,2.9,1.07,0,">1 nonsynonymous","G9K D59S",2
"lib1","SARS-CoV-2","TTAATGGGTGCAATCT",3,8.25,8.86,-1.91,0.22,2.6,1.2,0.02,">1 nonsynonymous","N107K Y121L",2
"lib1","SARS-CoV-2","TTAATGGTATTAAACG",5,79.26,10.75,-0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATGTAACTATAAT",3,30.89,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D68T G117S N151F K198L",4
"lib1","SARS-CoV-2","TTAATGTACGAACAAA",2,26.39,6.48,-4.28,0.3,1.5,1.1,0.01,">1 nonsynonymous","V103C G155C",2
"lib1","SARS-CoV-2","TTAATGTACTACCAAC",1,19.7,6.37,-4.39,0.6,1.5,1.09,0.04,">1 nonsynonymous","E10T F44T I72N",3
"lib1","SARS-CoV-2","TTAATGTATGAAGAAA",5,143,10.41,-0.36,0.03,2.9,1.06,0,">1 nonsynonymous","C61S D97I K128R V173A",4
"lib1","SARS-CoV-2","TTAATGTCAGGTCAAA",2,29.92,6,-4.76,2,1.5,1.09,0,">1 nonsynonymous","I28V Y39M L60K Y93V",4
"lib1","SARS-CoV-2","TTAATGTGCAAAGCGC",4,66.99,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12Q T100H V115C D137P",4
"lib1","SARS-CoV-2","TTAATGTGGCCCGGGA",5,15.12,10.64,-0.12,0.07,2.94,1,0,">1 nonsynonymous","S129R P149A V173E",3
"lib1","SARS-CoV-2","TTAATTAAAAACGTAG",1,7.12,6,-4.76,2,1.5,1.08,0.04,">1 nonsynonymous","P82T G86W F99T S184M",4
"lib1","SARS-CoV-2","TTAATTAATAGATGCA",1,18.76,9.94,-0.83,0.14,1.86,1.15,0.01,">1 nonsynonymous","F8S S43V",2
"lib1","SARS-CoV-2","TTAATTAATCCCCTAC",4,67.83,8.56,-2.21,0.15,1.94,1.15,0.01,">1 nonsynonymous","L60Y S108I",2
"lib1","SARS-CoV-2","TTAATTACAACTAAAA",5,108.09,7.89,-2.87,0.15,1.5,1.1,0.01,">1 nonsynonymous","G9K F99W N157C",3
"lib1","SARS-CoV-2","TTAATTACGGGTAAAA",5,32.43,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A42R P82N L95S D137Y",4
"lib1","SARS-CoV-2","TTAATTACTAAAGACT",2,25.25,10.12,-0.65,0.12,2.43,1,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","TTAATTAGTAGATCAT",2,48.76,8.52,-2.25,0.16,1.8,1.16,0.01,">1 nonsynonymous","K132S Q176R",2
"lib1","SARS-CoV-2","TTAATTAGTATCAGGT",4,36071.99,9.15,-1.62,0.05,2.72,1.08,0,">1 nonsynonymous","D34R L125V",2
"lib1","SARS-CoV-2","TTAATTAGTTACGTCA",4,144.17,10.13,-0.64,0.03,2.96,1,0,"1 nonsynonymous","L125S",1
"lib1","SARS-CoV-2","TTAATTATAAAAGACG",5,69.22,10.2,-0.57,0.05,2.72,1.01,0,">1 nonsynonymous","E10L A81E",2
"lib1","SARS-CoV-2","TTAATTATAACCATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12K V103* L131R I142V",4
"lib1","SARS-CoV-2","TTAATTATACTCGCGA",6,106.79,7.75,-3.02,0.21,1.5,1.17,0.01,">1 nonsynonymous","C61M S69M N107A T201M",4
"lib1","SARS-CoV-2","TTAATTATCCCCCTTG",2,37.61,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","R73Q G86S N151T T201H",4
"lib1","SARS-CoV-2","TTAATTCAAAAAGCCG",7,49.67,10.03,-0.73,0.15,1.85,1.06,0.01,">1 nonsynonymous","A18V D34T C61R",3
"lib1","SARS-CoV-2","TTAATTCAATGGATTA",4,102.49,10.24,-0.52,0.05,2.9,1.04,0,">1 nonsynonymous","K26S V37L F156R",3
"lib1","SARS-CoV-2","TTAATTCAGGCGGACG",2,4.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S69R",1
"lib1","SARS-CoV-2","TTAATTCCATGTGTTC",1,7.46,10.73,-0.03,0.1,2.94,1.05,0.01,">1 nonsynonymous","V37S N64P",2
"lib1","SARS-CoV-2","TTAATTCCCATATTAA",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","TTAATTCCTTAATACT",3,11.89,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F12S S19V Y50K T63I Q84L I104M S147P P169V",8
"lib1","SARS-CoV-2","TTAATTCGTAGGGATT",5,87.69,10.57,-0.2,0.04,2.92,1.04,0,">1 nonsynonymous","G116T T148M",2
"lib1","SARS-CoV-2","TTAATTCTATGAATGT",3,37.48,8.83,-1.93,0.17,1.78,1.09,0.01,">1 nonsynonymous","T15S A18E N64F Y121V",4
"lib1","SARS-CoV-2","TTAATTCTGCAATCTT",5,15.11,8.59,-2.18,0.14,2.82,1.02,0.01,">1 nonsynonymous","S36E N40A T46S Y119L Q163T",5
"lib1","SARS-CoV-2","TTAATTCTGCTTAACA",1,3.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAATTCTTTATAGGC",2,13.67,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A42V K94T S200R",3
"lib1","SARS-CoV-2","TTAATTGAACCACAGG",9,59.01,9.95,-0.82,0.09,2.28,1.09,0,">1 nonsynonymous","A14Y T100Y",2
"lib1","SARS-CoV-2","TTAATTGAAGACAAAT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N T148L V173S",3
"lib1","SARS-CoV-2","TTAATTGAATGAACAA",4,19.22,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F70K F134A",2
"lib1","SARS-CoV-2","TTAATTGACAAGGAAC",2,50.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C61S G117P R124Y A145W V173A Q176Y",6
"lib1","SARS-CoV-2","TTAATTGACGTTAACC",4,75.99,10.73,-0.03,0.05,2.92,1.06,0,">1 nonsynonymous","L5E A18N D97S",3
"lib1","SARS-CoV-2","TTAATTGACTAATTAA",4,74.64,10.21,-0.55,0.09,2.53,1.03,0,">1 nonsynonymous","K94L N130R",2
"lib1","SARS-CoV-2","TTAATTGACTTACGAT",2,16.2,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R16K N40Y T100M R124I G152I",5
"lib1","SARS-CoV-2","TTAATTGACTTGGAGC",6,42.72,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N13L Q84R F126Q Y175M",4
"lib1","SARS-CoV-2","TTAATTGAGACACATA",2,62.85,10.73,-0.04,0.08,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAATTGCACAAAAAG",5,3.22,NA,NA,NA,NA,NA,NA,"stop","R16* T148Y",2
"lib1","SARS-CoV-2","TTAATTGCATTGTATT",2,8.95,10.9,0.13,0.09,3,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAATTGCTGTACAGA",4,5.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S S53F N120L",3
"lib1","SARS-CoV-2","TTAATTGTGACTAAAC",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47T W106Q Y143N",3
"lib1","SARS-CoV-2","TTAATTGTTAAGACAA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","N1V P96*",2
"lib1","SARS-CoV-2","TTAATTTAAGGCGCTT",2,11.74,10.79,0.03,0.08,2.95,1,0,">1 nonsynonymous","G9T R16A",2
"lib1","SARS-CoV-2","TTAATTTATCCAATAT",4,25.2,10.03,-0.74,0.07,1.88,1.08,0,">1 nonsynonymous","V37F P82A D98R L122G",4
"lib1","SARS-CoV-2","TTAATTTCAAAGGAAT",3,1.08,NA,NA,NA,NA,NA,NA,"stop","N4D D90L F99Q N151M F156*",5
"lib1","SARS-CoV-2","TTAATTTCCCCTTCAA",8,45.77,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","I80G",1
"lib1","SARS-CoV-2","TTAATTTCCCGCAGGG",3,76.03,9.01,-1.76,0.09,2.8,1.16,0,"1 nonsynonymous","Y119C",1
"lib1","SARS-CoV-2","TTAATTTCGACATCAT",3,110.33,9.23,-1.54,0.16,1.73,1.11,0.01,">1 nonsynonymous","D90L F134T K199E",3
"lib1","SARS-CoV-2","TTAATTTGACAATTGA",3,100.66,8.94,-1.83,0.05,2.78,1.11,0,">1 nonsynonymous","D97I G117L",2
"lib1","SARS-CoV-2","TTAATTTGAGACGAAC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","S69*",1
"lib1","SARS-CoV-2","TTAATTTGAGGTGCAT",6,59.93,10.7,-0.06,0.05,2.88,1.06,0,">1 nonsynonymous","V153C T201Y",2
"lib1","SARS-CoV-2","TTAATTTGCTCCTACG",4,31.3,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","L5T T63M I88H P149Y P177L",5
"lib1","SARS-CoV-2","TTAATTTGTTACACAG",1,0.82,NA,NA,NA,NA,NA,NA,"stop","F8T S45* Y119C S129R",4
"lib1","SARS-CoV-2","TTAATTTTAAAGTTAA",1,18.2,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","E10D E76D Q84L D90C L95Y",5
"lib1","SARS-CoV-2","TTAATTTTAAATTTTA",2,5.15,10.68,-0.09,0.24,2.01,1.02,0.02,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","TTAATTTTAGGTATAG",5,6.87,9.88,-0.88,0.24,2.55,1.06,0.02,">1 nonsynonymous","L57Q K132H",2
"lib1","SARS-CoV-2","TTAATTTTCGAAACAT",2,10.67,10.67,-0.09,0.09,2.9,1.12,0.01,"1 nonsynonymous","P149D",1
"lib1","SARS-CoV-2","TTAATTTTGCAGCATA",3,25.42,6.7,-4.07,0.63,1.5,1.13,0.01,">1 nonsynonymous","F12V S19T A89Q",3
"lib1","SARS-CoV-2","TTAATTTTTAAAGAAA",7,73.89,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N118C F167V",2
"lib1","SARS-CoV-2","TTACAAAAGAAATATA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","T3S T15R D97* Q144V",4
"lib1","SARS-CoV-2","TTACAAAAGGTCATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N58F I72* N157T",3
"lib1","SARS-CoV-2","TTACAAAAGTGACTCT",1,48.13,9.93,-0.83,0.13,2.36,1.04,0.01,">1 nonsynonymous","K48Y S184F",2
"lib1","SARS-CoV-2","TTACAAACAGCTTCTG",5,106.51,10.79,0.03,0.09,2.91,1.05,0,">1 nonsynonymous","K56S T85R",2
"lib1","SARS-CoV-2","TTACAAACATTACGCT",6,133.98,10.25,-0.52,0.04,2.88,1.05,0,">1 nonsynonymous","I2S K87G",2
"lib1","SARS-CoV-2","TTACAAACGCTTGGCG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P82E I88*",2
"lib1","SARS-CoV-2","TTACAAAGAATAAACG",2,10.94,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95R V103D K198S",3
"lib1","SARS-CoV-2","TTACAAAGCTCCGATC",3,18.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71N",1
"lib1","SARS-CoV-2","TTACAAATAACGTGGG",9,73.43,10.82,0.06,0.07,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACAAATTATTCAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","Q79* R124F T140R",3
"lib1","SARS-CoV-2","TTACAACAAACGGAAC",4,13.02,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","S113Y L162Q",2
"lib1","SARS-CoV-2","TTACAACAACAAAAAC",2,25.4,10.68,-0.08,0.07,2.78,1.1,0,">1 nonsynonymous","I2M N110M",2
"lib1","SARS-CoV-2","TTACAACAAGAGTAAT",7,56.37,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","D34G L95D",2
"lib1","SARS-CoV-2","TTACAACACAATAAGT",1,0.76,NA,NA,NA,NA,NA,NA,"stop","S29* C61W D97T T148P",4
"lib1","SARS-CoV-2","TTACAACACTAGAAAG",9,151.02,10.81,0.05,0.07,2.91,1.06,0,">1 nonsynonymous","G9S I72V",2
"lib1","SARS-CoV-2","TTACAACACTATGCAG",1,26.37,10.18,-0.58,0.03,2.96,1.01,0,"1 nonsynonymous","Q144I",1
"lib1","SARS-CoV-2","TTACAACAGCTAACAA",2,102.25,10.9,0.13,0.06,2.94,1.03,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","TTACAACAGGGGCATG",5,37.69,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","K48E P82D Y93V G152S A192L",5
"lib1","SARS-CoV-2","TTACAACATAATCTTA",3,71.66,6.96,-3.8,0.37,1.5,1.13,0.03,">1 nonsynonymous","R73L S139V",2
"lib1","SARS-CoV-2","TTACAACATTAGTATA",1,18.18,10.89,0.13,0.09,2.94,1.04,0,">1 nonsynonymous","L5Q R27Q",2
"lib1","SARS-CoV-2","TTACAACATTTGATTA",3,48.96,8.24,-2.52,0.24,1.87,1.18,0.02,">1 nonsynonymous","I104S V153A G166I",3
"lib1","SARS-CoV-2","TTACAACCACACACTG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R F17A N107M Y119V N130D C158S",6
"lib1","SARS-CoV-2","TTACAACCACCACTAA",5,46.59,10.01,-0.75,0.1,2.79,1.05,0,">1 nonsynonymous","F156L L162M",2
"lib1","SARS-CoV-2","TTACAACCAGGGCAAT",2,12.5,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F44R P54M G86R F160I",4
"lib1","SARS-CoV-2","TTACAACCCAAGTCAC",2,68.36,9.79,-0.97,0.03,2.84,1.05,0,">1 nonsynonymous","S53N G146R",2
"lib1","SARS-CoV-2","TTACAACCCATCCCCG",9,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T46N N64D V77D S147P T148A",6
"lib1","SARS-CoV-2","TTACAACCTCGGTTAT",5,0.08,NA,NA,NA,NA,NA,NA,"stop","C6R N107H S147*",3
"lib1","SARS-CoV-2","TTACAACGTACTCAAT",3,119.43,10.72,-0.04,0.06,2.83,1.07,0,">1 nonsynonymous","N64L L188C",2
"lib1","SARS-CoV-2","TTACAACTAAATAAAG",1,5.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G9F F99S",2
"lib1","SARS-CoV-2","TTACAACTAGGACAAT",10,200.19,10.77,0.01,0.07,2.88,1.06,0,"1 nonsynonymous","L187K",1
"lib1","SARS-CoV-2","TTACAACTCATATTCA",5,0.62,NA,NA,NA,NA,NA,NA,"stop","A22V V37S Y119F D137T G155S G166K A190S G196*",8
"lib1","SARS-CoV-2","TTACAACTTTATTTGC",3,25.52,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K26E I88Q A105L G117Y P169S",5
"lib1","SARS-CoV-2","TTACAAGAAAAAACTT",8,101.04,10.7,-0.07,0.06,2.86,1.08,0,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","TTACAAGAAACGTGCC",3,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92S F126L P149G",3
"lib1","SARS-CoV-2","TTACAAGAGCCCTACG",2,61.6,10.41,-0.36,0.05,2.85,1.11,0,">1 nonsynonymous","F44D K128H T140N",3
"lib1","SARS-CoV-2","TTACAAGAGGTTAAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","G9R I28T C49* V173C",4
"lib1","SARS-CoV-2","TTACAAGATTTACATG",2,21.66,6,-4.76,2,3,1.16,0,">1 nonsynonymous","P96W W106F",2
"lib1","SARS-CoV-2","TTACAAGCAGTGGATC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40I C49A V77M N92A A192V",5
"lib1","SARS-CoV-2","TTACAAGCCCCTTTAA",2,38.04,9.43,-1.34,0.07,2.89,1.1,0,"1 nonsynonymous","N157S",1
"lib1","SARS-CoV-2","TTACAAGTCACGCCAG",3,88.78,9.92,-0.84,0.13,2.16,1.06,0.01,">1 nonsynonymous","E10I D98C",2
"lib1","SARS-CoV-2","TTACAAGTGTACACAA",5,2.22,NA,NA,NA,NA,NA,NA,"stop","G83L T100* W106* G152A",4
"lib1","SARS-CoV-2","TTACAAGTTCTGCGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35P F99C Y123I P133S Y143* R179K G196V",7
"lib1","SARS-CoV-2","TTACAATACCCACTGA",2,21.27,9.49,-1.27,0.14,1.93,1.09,0.01,">1 nonsynonymous","N4R E10V C31I",3
"lib1","SARS-CoV-2","TTACAATATCAAAGCA",4,21.86,10.67,-0.09,0.06,2.95,1.05,0,"1 nonsynonymous","A18G",1
"lib1","SARS-CoV-2","TTACAATCTATGATTT",2,41.78,10.26,-0.5,0.07,2.69,1.05,0,">1 nonsynonymous","R16G P54C",2
"lib1","SARS-CoV-2","TTACAATGGATGCTCT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","S43V P82L F185* L188V",4
"lib1","SARS-CoV-2","TTACAATTAGCAGTAG",5,0.05,NA,NA,NA,NA,NA,NA,"stop","C49S V103Y L162*",3
"lib1","SARS-CoV-2","TTACAATTAGGGCAAA",4,34.64,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C49V Y91M D97I",3
"lib1","SARS-CoV-2","TTACACAAAAAGCACT",2,48.68,10.68,-0.08,0.05,2.86,1,0,">1 nonsynonymous","V37D Q168H Y178I",3
"lib1","SARS-CoV-2","TTACACAAACTCAGAT",7,80.32,6,-4.76,1.31,1.5,1.13,0.01,">1 nonsynonymous","R124A I142L Y175S",3
"lib1","SARS-CoV-2","TTACACAATGTTAACG",2,50.6,8.51,-2.25,0.14,2.3,1.06,0.01,">1 nonsynonymous","Y165S N171S P197W",3
"lib1","SARS-CoV-2","TTACACAATTAAACAC",1,57.51,10.63,-0.13,0.08,2.81,1.08,0,">1 nonsynonymous","T3E D97N",2
"lib1","SARS-CoV-2","TTACACAATTAACATC",5,30.74,6,-4.76,2,1.5,1.4,0.08,">1 nonsynonymous","Y50M I104R",2
"lib1","SARS-CoV-2","TTACACAATTCACTCT",7,7.99,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","I104D",1
"lib1","SARS-CoV-2","TTACACAATTCTCCAT",8,83.45,10.13,-0.63,0.08,2.43,1,0,"1 nonsynonymous","Y21I",1
"lib1","SARS-CoV-2","TTACACACCACGTGCA",8,1.47,NA,NA,NA,NA,NA,NA,"stop","Y93* W106P",2
"lib1","SARS-CoV-2","TTACACACTCGTACAA",5,33.38,7,-3.77,0.21,1.59,1.16,0.01,">1 nonsynonymous","C6T V37R D90W R136H",4
"lib1","SARS-CoV-2","TTACACATAAATTAAT",1,8.92,11.08,0.31,0.21,2.86,1,0.01,"1 nonsynonymous","N4D",1
"lib1","SARS-CoV-2","TTACACATTAAAGGCT",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S D97Y",2
"lib1","SARS-CoV-2","TTACACATTTTTGTTA",4,35.5,7.13,-3.63,0.32,1.5,1.07,0.03,">1 nonsynonymous","S45I L95P R127V",3
"lib1","SARS-CoV-2","TTACACCAGACATCGG",8,142.16,9.91,-0.85,0.08,2.61,1.04,0,">1 nonsynonymous","L57G A145S",2
"lib1","SARS-CoV-2","TTACACCATATACGAA",11,3.48,NA,NA,NA,NA,NA,NA,"stop","L5* T15Q N40Y",3
"lib1","SARS-CoV-2","TTACACCCCGAATAGT",7,58.36,6,-4.76,2,3,1.16,0,">1 nonsynonymous","N107V L122P Y143W E154D",4
"lib1","SARS-CoV-2","TTACACCCGCAGTTTT",2,38.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53L N107Y",2
"lib1","SARS-CoV-2","TTACACCCTTGTGAAA",4,2.89,NA,NA,NA,NA,NA,NA,"stop","C6Y F17V F99* V103F P133S",5
"lib1","SARS-CoV-2","TTACACCGACCTATTA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","A18P K87L K132*",3
"lib1","SARS-CoV-2","TTACACCTGCATTTTT",1,22.29,7.57,-3.19,0.44,1.5,1.14,0.07,">1 nonsynonymous","R25G N64H N120M",3
"lib1","SARS-CoV-2","TTACACCTTTCCTCAG",3,85.88,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V37D N92I Y165L Y178N",4
"lib1","SARS-CoV-2","TTACACGACAGCATAT",5,5.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C31S T55A S113C K132C",4
"lib1","SARS-CoV-2","TTACACGCGTATCACA",7,48.71,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49V I88D",2
"lib1","SARS-CoV-2","TTACACGGGAAAACAT",2,23.74,6,-4.76,2,3,1.12,0,">1 nonsynonymous","V37D C102N R136P",3
"lib1","SARS-CoV-2","TTACACGGTATTGTCT",9,91.78,10.08,-0.69,0.1,2.44,1,0,"1 nonsynonymous","A81L",1
"lib1","SARS-CoV-2","TTACACGTCCATCCAG",1,25.96,8.22,-2.55,0.37,1.5,1.1,0.05,">1 nonsynonymous","K26L Y35F C61Y A89Y N120M",5
"lib1","SARS-CoV-2","TTACACTACACTGTGT",1,51.16,10.81,0.05,0.09,2.95,1.02,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","TTACACTAGCAAAACG",2,18.02,10.88,0.12,0.08,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACACTAGTCATATG",4,30.9,6.58,-4.19,0.49,1.5,1.2,0.03,">1 nonsynonymous","F44A G117F T140P P149S P197Y",5
"lib1","SARS-CoV-2","TTACACTCTTCAAACT",6,53.19,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S19K V32A K48E G83K C158T",5
"lib1","SARS-CoV-2","TTACACTTAGCGACTA",2,18.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6I F12K T55H G117R R124P P161T T201D",7
"lib1","SARS-CoV-2","TTACAGAAAGCCTGTG",2,58.11,6.17,-4.59,0.65,1.5,1.11,0.01,">1 nonsynonymous","R16D T46P V71T P82S N107R Q163A",6
"lib1","SARS-CoV-2","TTACAGAAGGAGAGCC",9,79.48,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4L S69A L111G E141T F167W",5
"lib1","SARS-CoV-2","TTACAGAAGTTACAAC",9,145.88,10.4,-0.36,0.04,2.87,1.07,0,">1 nonsynonymous","T63L F160T V173R",3
"lib1","SARS-CoV-2","TTACAGAATAAAAAAG",3,12.98,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R25G Y91W V173C",3
"lib1","SARS-CoV-2","TTACAGACCTAGGCAG",9,93.07,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L60V P96K P177K",3
"lib1","SARS-CoV-2","TTACAGACGCGGGCAA",2,42.55,6,-4.76,1.56,1.5,1.13,0.01,">1 nonsynonymous","N4Y R25W P149R",3
"lib1","SARS-CoV-2","TTACAGACTTATTTCA",1,7.79,10.33,-0.44,0.16,2.79,1.15,0.01,">1 nonsynonymous","F8L Y123S C195F",3
"lib1","SARS-CoV-2","TTACAGAGAAACCAAG",4,50.8,10.58,-0.19,0.04,2.91,1,0,">1 nonsynonymous","Y66T G155S",2
"lib1","SARS-CoV-2","TTACAGAGATGACGAC",8,70.37,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","A14G G74P A81S",3
"lib1","SARS-CoV-2","TTACAGAGGGGTTAGT",14,236.27,10.04,-0.73,0.09,2.28,1.03,0,">1 nonsynonymous","F47N K198R",2
"lib1","SARS-CoV-2","TTACAGATACACCTAA",2,15.98,6,-4.76,2,1.5,1.28,0.07,"1 nonsynonymous","V20M",1
"lib1","SARS-CoV-2","TTACAGATGGTAGACC",2,32.38,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","K56H C61S D112S E135L N157R",5
"lib1","SARS-CoV-2","TTACAGCAACTAACCA",4,60.95,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L60S I88C S129L",3
"lib1","SARS-CoV-2","TTACAGCAGAAATGTC",9,70.18,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R73H F126R",2
"lib1","SARS-CoV-2","TTACAGCCACGAGGCT",2,32.5,8.82,-1.94,0.13,2.65,1.14,0.01,">1 nonsynonymous","T100R N130F F160P T170M",4
"lib1","SARS-CoV-2","TTACAGCCGCGGCAGC",1,11.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L S129L",2
"lib1","SARS-CoV-2","TTACAGGAAAAATAGT",2,43.26,6.37,-4.4,0.4,1.5,1.06,0.01,">1 nonsynonymous","P7M P177R",2
"lib1","SARS-CoV-2","TTACAGGAGAACCGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V103G N109K L122*",3
"lib1","SARS-CoV-2","TTACAGGTTACAGTGA",2,17.19,9.7,-1.06,0.07,2.94,1.01,0,">1 nonsynonymous","Y35L P149S T170R",3
"lib1","SARS-CoV-2","TTACAGTAATGCTACG",2,38.67,6,-4.76,2,3,1.18,0,">1 nonsynonymous","R27A K87Y Y121D D137H",4
"lib1","SARS-CoV-2","TTACAGTACAACATCC",4,40.22,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","S19M G51L T55V V115T V194I",5
"lib1","SARS-CoV-2","TTACAGTACAAGCGAG",2,15.69,6,-4.76,1.74,3,1.12,0,">1 nonsynonymous","P133E Y165K",2
"lib1","SARS-CoV-2","TTACAGTACATAGTTA",7,125.37,6,-4.76,0.94,1.5,1.2,0.01,">1 nonsynonymous","S19A C31S V71H S200I",4
"lib1","SARS-CoV-2","TTACAGTATTGAGAAC",2,12.6,10.29,-0.47,0.18,2.26,1.07,0.01,">1 nonsynonymous","G9R E135V",2
"lib1","SARS-CoV-2","TTACAGTCATCCATAG",2,13.89,7.46,-3.3,0.51,1.5,1.02,0.07,">1 nonsynonymous","E10A F167P",2
"lib1","SARS-CoV-2","TTACAGTTCGAAAAAA",3,103.16,10.61,-0.16,0.07,2.78,1.14,0,"1 nonsynonymous","S41L",1
"lib1","SARS-CoV-2","TTACAGTTGCTAAGTT",3,27.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F99R W106L L122H S129F S139N T201G",6
"lib1","SARS-CoV-2","TTACAGTTGTATTCCT",4,73.69,10.14,-0.63,0.07,2.66,1.07,0,"1 nonsynonymous","S139F",1
"lib1","SARS-CoV-2","TTACAGTTTTTAAACT",8,117.79,10.11,-0.65,0.08,2.28,1.05,0,">1 nonsynonymous","W106Y K128Y",2
"lib1","SARS-CoV-2","TTACATAAAAGTTCCC",2,37.61,10.57,-0.19,0.08,2.94,1.05,0,"1 nonsynonymous","N64P",1
"lib1","SARS-CoV-2","TTACATAAGGCCAAAC",9,44.77,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10S K128Y V180D",3
"lib1","SARS-CoV-2","TTACATAATAATTTAA",1,57.64,10.84,0.07,0.07,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTACATACAAGAAGCT",4,18.71,10.52,-0.24,0.07,2.85,1.09,0,"1 nonsynonymous","L162V",1
"lib1","SARS-CoV-2","TTACATATATAATATT",4,53.33,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R73K D90V A145H",3
"lib1","SARS-CoV-2","TTACATATGCAACGAT",1,14.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V103Y P133S",2
"lib1","SARS-CoV-2","TTACATATGCTGACGA",7,50.44,9.43,-1.33,0.31,1.5,1,0.05,">1 nonsynonymous","S19Y G152D K198S",3
"lib1","SARS-CoV-2","TTACATATTACCATGA",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I V71K Y91F Q144L",4
"lib1","SARS-CoV-2","TTACATATTCAGAAGT",3,0.78,NA,NA,NA,NA,NA,NA,"stop","V20R A33I C61L D68R Y91K P133*",6
"lib1","SARS-CoV-2","TTACATCAAAAATCAT",1,21.2,6.48,-4.29,0.28,2.07,1.1,0,">1 nonsynonymous","D68I P96L T100L",3
"lib1","SARS-CoV-2","TTACATCCAAAAGGGC",3,36.02,6.16,-4.61,0.76,1.5,1.13,0.02,">1 nonsynonymous","L95S W106L N120K Y175S",4
"lib1","SARS-CoV-2","TTACATCCAAGAAGTA",7,157.94,9.78,-0.99,0.08,2.15,1.04,0,"1 nonsynonymous","A89Q",1
"lib1","SARS-CoV-2","TTACATCCAGGGGACT",6,4.02,NA,NA,NA,NA,NA,NA,"stop","K87M R179*",2
"lib1","SARS-CoV-2","TTACATCGACATATGA",1,0.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60C",1
"lib1","SARS-CoV-2","TTACATCGGTCCTCAA",11,191.36,10.63,-0.13,0.05,2.93,1.01,0,"1 nonsynonymous","G152Y",1
"lib1","SARS-CoV-2","TTACATCTAACTAGTC",14,255.57,9.18,-1.58,0.07,2.75,1.12,0,">1 nonsynonymous","L60K F156C K198V",3
"lib1","SARS-CoV-2","TTACATCTAGACAGAT",10,26.32,6,-4.76,2,1.5,1.34,0.07,">1 nonsynonymous","G86R Y123S",2
"lib1","SARS-CoV-2","TTACATGCAGGAACAG",5,89.05,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","V71P K87P G116T F160C Q176L",5
"lib1","SARS-CoV-2","TTACATGGGACACCTC",4,58.82,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","W23L F126L E154V Y178F",4
"lib1","SARS-CoV-2","TTACATGGTTTCTAGG",3,10.8,9.1,-1.66,0.37,1.5,1,0.07,">1 nonsynonymous","Y50K N130L",2
"lib1","SARS-CoV-2","TTACATGTTAATAGAA",13,112.31,9.98,-0.78,0.06,2.12,1,0,">1 nonsynonymous","V11F W106V",2
"lib1","SARS-CoV-2","TTACATTAAACATTAT",1,30.41,10.59,-0.18,0.04,2.93,1.04,0,">1 nonsynonymous","Y123F F156N",2
"lib1","SARS-CoV-2","TTACATTAATCGTTTA",3,36.19,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N64P T100P K114L G117T",4
"lib1","SARS-CoV-2","TTACATTATAGCTCCG",7,37.77,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I2N Y50I K87E F99P P197N",5
"lib1","SARS-CoV-2","TTACATTATCCCATAC",8,61.82,6,-4.76,0.8,1.5,1.13,0.01,">1 nonsynonymous","A18E D34S F156D F167I Y178V",5
"lib1","SARS-CoV-2","TTACATTCCGCCTTGT",6,21.07,6.3,-4.47,0.67,1.5,1.13,0.03,"1 nonsynonymous","Y93E",1
"lib1","SARS-CoV-2","TTACATTGCATACGGT",1,7.83,6.61,-4.16,2,3,1.12,0.01,">1 nonsynonymous","N1K Y50D",2
"lib1","SARS-CoV-2","TTACATTTGTCACGAC",6,43.94,10.34,-0.42,0.05,2.83,1.03,0,">1 nonsynonymous","N13R I104L",2
"lib1","SARS-CoV-2","TTACCAAAAAACAGGG",4,47.39,10.24,-0.52,0.1,2.62,1.13,0,">1 nonsynonymous","V71L P149Q",2
"lib1","SARS-CoV-2","TTACCAAACACAGAAT",2,41.39,9.82,-0.95,0.07,2.96,1.02,0,"1 nonsynonymous","N171L",1
"lib1","SARS-CoV-2","TTACCAAACTCTCAAT",6,124.49,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5S F12S F62V P177L",4
"lib1","SARS-CoV-2","TTACCAAATATATAAT",4,42.45,10.39,-0.37,0.04,2.85,1,0,">1 nonsynonymous","A18V T140R",2
"lib1","SARS-CoV-2","TTACCAAGACCATTCT",7,36.01,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35F A42W S69M G101C",4
"lib1","SARS-CoV-2","TTACCAAGATAGGGCA",14,139.77,6.27,-4.49,0.7,1.5,1.25,0.02,">1 nonsynonymous","V37Y G86R",2
"lib1","SARS-CoV-2","TTACCAAGCGGTAACA",4,96.47,10.73,-0.03,0.08,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACCAATAAGCAGTA",2,19.88,8.63,-2.13,0.26,1.73,1.23,0.03,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","TTACCAATAGCAGATA",5,50.3,10.19,-0.57,0.06,2.82,1.03,0,"1 nonsynonymous","L57S",1
"lib1","SARS-CoV-2","TTACCAATTAAGAATT",4,65.92,10.75,-0.01,0.06,2.82,1.03,0,">1 nonsynonymous","G9D F62Q",2
"lib1","SARS-CoV-2","TTACCACACTATTTTT",1,32.3,10.72,-0.04,0.08,2.86,1.06,0,"1 nonsynonymous","K199W",1
"lib1","SARS-CoV-2","TTACCACAGATCACGT",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R T100Y K128I",3
"lib1","SARS-CoV-2","TTACCACATATTCACT",1,12.21,10.67,-0.09,0.1,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACCACGAAAAGCTA",6,107.05,8.77,-2,0.13,1.53,1.1,0.01,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","TTACCACGAATCAAAA",3,104.69,10.45,-0.31,0.06,2.89,1.01,0,">1 nonsynonymous","T15K C61F",2
"lib1","SARS-CoV-2","TTACCACGCACAATTC",1,8.49,6.6,-4.16,0.54,1.5,1,0.05,">1 nonsynonymous","I72C D137L C158F",3
"lib1","SARS-CoV-2","TTACCACGGTACAATA",3,19.18,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12G Y93F",2
"lib1","SARS-CoV-2","TTACCACTTAAAACAT",2,63.01,8.96,-1.8,0.12,2.71,1.13,0.01,">1 nonsynonymous","D97A G117A S139G",3
"lib1","SARS-CoV-2","TTACCAGAAAACCGAG",2,6.37,9.97,-0.8,0.18,2.45,1.12,0.01,">1 nonsynonymous","D34R P149T",2
"lib1","SARS-CoV-2","TTACCAGATACATAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26L V52A I142G C158*",4
"lib1","SARS-CoV-2","TTACCAGATCTCATCC",2,8.15,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F167A",1
"lib1","SARS-CoV-2","TTACCAGCAGAAGCCG",1,36.76,7.86,-2.9,0.23,1.81,1.1,0.02,"1 nonsynonymous","C150S",1
"lib1","SARS-CoV-2","TTACCAGCGCCACTCG",1,53.43,10.72,-0.04,0.08,2.88,1.02,0,"1 nonsynonymous","F160L",1
"lib1","SARS-CoV-2","TTACCAGCGGCGAACA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","S41G T55H E76V Q84Y D90Y D98*",6
"lib1","SARS-CoV-2","TTACCATAAAACATAA",8,3.97,NA,NA,NA,NA,NA,NA,"stop","L60* Q168S Y178P",3
"lib1","SARS-CoV-2","TTACCATACGATCTAT",6,53.34,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D34R F99Q T201S",3
"lib1","SARS-CoV-2","TTACCATACTCACAAT",7,153.2,10.77,0.01,0.07,2.88,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TTACCATCAATAGTAC",1,159.63,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K26V V77T K87N F134T Q176G",5
"lib1","SARS-CoV-2","TTACCATGAAGAGCAG",3,38.55,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45C P96Q W106E",3
"lib1","SARS-CoV-2","TTACCATGGTGAAATT",2,11.49,NA,NA,NA,NA,NA,NA,"stop","I2D N13S K56Q Q79*",4
"lib1","SARS-CoV-2","TTACCATGTTATGTAA",9,108.07,10.06,-0.7,0.08,2.27,1.01,0,"1 nonsynonymous","G51F",1
"lib1","SARS-CoV-2","TTACCATTAAAAACGT",4,67.86,10.23,-0.54,0.07,2.75,1.02,0,">1 nonsynonymous","T3N F44S Q163T",3
"lib1","SARS-CoV-2","TTACCATTGCCCAATA",5,30.48,10.49,-0.28,0.06,2.98,1.01,0,"1 nonsynonymous","F62G",1
"lib1","SARS-CoV-2","TTACCATTTGCACTAA",1,20.91,9.96,-0.81,0.08,2.62,1.17,0,">1 nonsynonymous","F44R K48N",2
"lib1","SARS-CoV-2","TTACCCAAAATAAAAG",6,76.09,9.72,-1.05,0.08,1.88,1.09,0,">1 nonsynonymous","S19E L60I S147P",3
"lib1","SARS-CoV-2","TTACCCAACATCGGGG",6,86.97,10.69,-0.07,0.05,2.92,1.01,0,">1 nonsynonymous","T63V K132N",2
"lib1","SARS-CoV-2","TTACCCAACGAACAGT",1,71.52,9.25,-1.51,0.07,2.92,1.06,0,"1 nonsynonymous","G117M",1
"lib1","SARS-CoV-2","TTACCCACAGATCCCT",1,19.37,10.77,0.01,0.06,2.88,1.08,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TTACCCACGTTAGACA",4,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90E V103K Y119T L125S G146R",5
"lib1","SARS-CoV-2","TTACCCATTAGATTAT",1,4.26,NA,NA,NA,NA,NA,NA,"stop","K56* A89N V173K",3
"lib1","SARS-CoV-2","TTACCCCAAAGGTAGA",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I S129V E186N",3
"lib1","SARS-CoV-2","TTACCCCGGCATAGAA",4,15.96,6.52,-4.25,0.6,1.5,1.13,0.04,">1 nonsynonymous","G9T E76A W106L",3
"lib1","SARS-CoV-2","TTACCCCGGCCGAGAT",3,44.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTACCCGAAAACGACC",3,0.26,NA,NA,NA,NA,NA,NA,"stop","D90G P96L I104L C150*",4
"lib1","SARS-CoV-2","TTACCCGACCTGGATA",1,7.87,10.17,-0.6,0.1,3,1.03,0,"1 nonsynonymous","C6Y",1
"lib1","SARS-CoV-2","TTACCCGAGATTGCAA",4,84.07,10.9,0.13,0.06,2.96,1.02,0,"1 nonsynonymous","F160Y",1
"lib1","SARS-CoV-2","TTACCCGCCCGTTGGA",3,9.36,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R179M K199M",2
"lib1","SARS-CoV-2","TTACCCGCTAGGGAAA",1,7.78,6.8,-3.96,0.78,1.5,1.03,0.07,">1 nonsynonymous","A14M G74E L95N",3
"lib1","SARS-CoV-2","TTACCCGTAAAGTTGA",2,52.91,6.28,-4.49,0.2,1.5,1.11,0,">1 nonsynonymous","N107G F126L S139T Y143K Y178F",5
"lib1","SARS-CoV-2","TTACCCGTACACAACT",11,52.62,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D68G W106L",2
"lib1","SARS-CoV-2","TTACCCGTCCATAGCA",4,19.48,10.8,0.04,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACCCTAGTCGTGAT",5,132.3,10.73,-0.04,0.05,2.89,1.05,0,"1 nonsynonymous","L188F",1
"lib1","SARS-CoV-2","TTACCCTGACTCAGAG",2,55.04,7.17,-3.59,0.19,1.5,1.11,0.01,">1 nonsynonymous","R27K D59Q N107T P169G",4
"lib1","SARS-CoV-2","TTACCCTGTAACATTC",5,91.4,10.64,-0.12,0.06,2.88,1.08,0,"1 nonsynonymous","T3P",1
"lib1","SARS-CoV-2","TTACCCTTTAAATAAT",9,172.74,9.12,-1.64,0.07,2.79,1.12,0,">1 nonsynonymous","K48A G117S T140K T201L",4
"lib1","SARS-CoV-2","TTACCGAACGCGAGTC",5,59.49,9.43,-1.34,0.08,1.94,1.12,0,">1 nonsynonymous","F62K F126L P133V",3
"lib1","SARS-CoV-2","TTACCGAATCCCCATT",2,33.23,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","L95F G117S F160A",3
"lib1","SARS-CoV-2","TTACCGACACACCATG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","E10S V20R Y121*",3
"lib1","SARS-CoV-2","TTACCGACACTCGCTG",4,25.62,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","F8C D137N",2
"lib1","SARS-CoV-2","TTACCGAGAATACGAA",2,71.98,10.8,0.03,0.08,2.91,1.06,0,">1 nonsynonymous","S43F N64T",2
"lib1","SARS-CoV-2","TTACCGAGCCCAATCA",7,0.51,NA,NA,NA,NA,NA,NA,"stop","C6L I28E L95*",3
"lib1","SARS-CoV-2","TTACCGAGGCACCGGC",2,2.29,NA,NA,NA,NA,NA,NA,"stop","Y39E T100* V173G",3
"lib1","SARS-CoV-2","TTACCGCCAGGAGATC",11,75.54,10.81,0.05,0.08,2.86,1.09,0,">1 nonsynonymous","P54R T201W",2
"lib1","SARS-CoV-2","TTACCGCCTAAAAATT",8,154.5,10.4,-0.36,0.04,2.87,1.04,0,">1 nonsynonymous","A18E N58R N130T",3
"lib1","SARS-CoV-2","TTACCGCGCCCCAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6F D98M P177* T201H",4
"lib1","SARS-CoV-2","TTACCGCGGATAATCT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","D59* N107T",2
"lib1","SARS-CoV-2","TTACCGCTACAAATGA",8,102.55,10.14,-0.63,0.06,2.58,1.03,0,">1 nonsynonymous","I28V K48S K114M",3
"lib1","SARS-CoV-2","TTACCGGAAAGACAAT",6,24.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5N G86M Y119R",3
"lib1","SARS-CoV-2","TTACCGGATAACCAAG",3,29.76,10.58,-0.19,0.05,2.98,1,0,"1 nonsynonymous","A42C",1
"lib1","SARS-CoV-2","TTACCGGCCGAGTCTT",17,192.37,9.91,-0.85,0.11,2.27,1.03,0.01,">1 nonsynonymous","F12W P149R",2
"lib1","SARS-CoV-2","TTACCGGGCCAATAAC",5,36.8,10.22,-0.55,0.08,2.74,1,0,">1 nonsynonymous","V37R L57T",2
"lib1","SARS-CoV-2","TTACCGTAATCTGGCA",5,84.4,9.72,-1.05,0.05,2.89,1.04,0,">1 nonsynonymous","I2R F8L V37Y V115W G174M",5
"lib1","SARS-CoV-2","TTACCGTAATGGACAG",2,5.42,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","T55Q F99R",2
"lib1","SARS-CoV-2","TTACCGTGAGGTTATT",3,7.32,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C61R A81T V103N E141H F160L",5
"lib1","SARS-CoV-2","TTACCGTTAAAAATCG",1,17.48,6,-4.76,2,3,1.05,0,">1 nonsynonymous","G101M Y123L",2
"lib1","SARS-CoV-2","TTACCTAAACAATCAA",1,19.91,6.61,-4.16,0.66,1.5,1.15,0.07,">1 nonsynonymous","Y93T G172T",2
"lib1","SARS-CoV-2","TTACCTAACAGAATTA",8,70.41,6.01,-4.76,0.7,1.5,1.16,0.01,">1 nonsynonymous","T46F A81P T85M P149L",4
"lib1","SARS-CoV-2","TTACCTAATCCAAATG",6,0.59,NA,NA,NA,NA,NA,NA,"stop","G9* T55S E135C",3
"lib1","SARS-CoV-2","TTACCTAATGTGAAAC",9,80.85,9.09,-1.68,0.18,1.64,1.14,0.01,">1 nonsynonymous","F12Q D59G",2
"lib1","SARS-CoV-2","TTACCTACAGAGTTGT",8,109.96,10.75,-0.01,0.05,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACCTACGAAACGGC",3,28.52,10.55,-0.22,0.09,2.96,1.05,0.01,">1 nonsynonymous","V65I N151R",2
"lib1","SARS-CoV-2","TTACCTACGCTCCCGA",1,7.23,9.92,-0.84,0.15,2.32,1,0.01,">1 nonsynonymous","S36K V52N T100I",3
"lib1","SARS-CoV-2","TTACCTAGTAACTAGC",2,50.84,7.37,-3.4,0.19,1.64,1.15,0.01,">1 nonsynonymous","P7Y Y159Q V173Y",3
"lib1","SARS-CoV-2","TTACCTATGTGAGCGA",5,85.93,9.83,-0.93,0.1,2.71,1.04,0,">1 nonsynonymous","T3P G146Y T201K",3
"lib1","SARS-CoV-2","TTACCTATTTAACATT",4,127.43,10.29,-0.47,0.06,2.82,1.02,0,">1 nonsynonymous","I2L Y35F D90K Y178V",4
"lib1","SARS-CoV-2","TTACCTCAGAAATCGC",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V A42F C49F D98H",4
"lib1","SARS-CoV-2","TTACCTCATGAATATT",4,1.15,NA,NA,NA,NA,NA,NA,"stop","Y119* L125Y T140W T193P K198W",5
"lib1","SARS-CoV-2","TTACCTCATTAATGAC",1,25.55,10.07,-0.69,0.1,2.15,1.08,0.01,">1 nonsynonymous","N64G Y178I",2
"lib1","SARS-CoV-2","TTACCTCTAAAGTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","A42M Q84* D90R G117L N157G P177G",6
"lib1","SARS-CoV-2","TTACCTCTCGTTAAAC",1,72.77,8.06,-2.71,0.22,1.84,1.2,0.01,">1 nonsynonymous","A89S Q168S Y175S",3
"lib1","SARS-CoV-2","TTACCTGCTGCCATCA",3,76.88,10.15,-0.62,0.06,2.62,1.06,0,">1 nonsynonymous","N4V E10V",2
"lib1","SARS-CoV-2","TTACCTGTAAAATAAC",5,74.3,10.26,-0.51,0.07,2.88,1.04,0,">1 nonsynonymous","P7M K56M F156P",3
"lib1","SARS-CoV-2","TTACCTTCAAAGGGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","V37E V77* Y93T Y121D S139F R179F",6
"lib1","SARS-CoV-2","TTACCTTCACCTAATC",2,0.61,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib1","SARS-CoV-2","TTACCTTCATATAATT",1,42.17,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","C61L Y121M C158L",3
"lib1","SARS-CoV-2","TTACCTTCTGTGAACG",1,115.32,8.34,-2.42,0.14,2,1.1,0.01,">1 nonsynonymous","K56R A105T S129A G146K",4
"lib1","SARS-CoV-2","TTACCTTGTGAGTGGC",7,100.9,10.74,-0.03,0.03,2.91,1.04,0,">1 nonsynonymous","N130S N151M T201E",3
"lib1","SARS-CoV-2","TTACCTTTCAGTACTA",5,24.92,9.36,-1.4,0.22,1.5,1.05,0.03,">1 nonsynonymous","S41K T63V W106L",3
"lib1","SARS-CoV-2","TTACGAAAACATCTAA",7,52.02,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S19T A42I C49K D90E",4
"lib1","SARS-CoV-2","TTACGAAAAGCTTGTT",1,18.38,6.79,-3.97,0.51,1.5,1.01,0.05,">1 nonsynonymous","V103F K199L",2
"lib1","SARS-CoV-2","TTACGAAACACGACCT",1,16.35,6.07,-4.69,0.55,1.5,1.09,0.01,">1 nonsynonymous","P7S A22H G101Y G152T",4
"lib1","SARS-CoV-2","TTACGAAACAGCTGAA",1,20.67,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Y50M D68E",2
"lib1","SARS-CoV-2","TTACGAAACCACACTA",4,56.1,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K56L K87D G101N N120R L187S",5
"lib1","SARS-CoV-2","TTACGAAACGAGTGCG",1,22.02,10.7,-0.06,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACGAAACTAAACTG",3,66.58,10.49,-0.28,0.05,2.92,1.07,0,">1 nonsynonymous","A190C T201P",2
"lib1","SARS-CoV-2","TTACGAAATTGTTAAG",3,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F N107S P149S",3
"lib1","SARS-CoV-2","TTACGAACAACGAATA",2,9.67,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N13T Y50I A89L Y119L",4
"lib1","SARS-CoV-2","TTACGAACCAGAGGTT",6,95.34,9.81,-0.95,0.11,1.97,1.1,0,">1 nonsynonymous","E10S Y35D N64S N151S",4
"lib1","SARS-CoV-2","TTACGAACGAACCCAC",10,99.22,6.62,-4.15,0.54,1.5,1.23,0.04,">1 nonsynonymous","K56V V103M V153Y",3
"lib1","SARS-CoV-2","TTACGAACTCTCACCC",23,264.21,6,-4.76,2,1.75,1.15,0,"1 nonsynonymous","N92E",1
"lib1","SARS-CoV-2","TTACGAACTTTATTTG",5,91.88,6.15,-4.61,0.52,1.5,1.16,0.01,">1 nonsynonymous","F70L I80K Y178Q",3
"lib1","SARS-CoV-2","TTACGAAGAAAAGGCC",2,13.19,10.6,-0.16,0.07,2.96,1.05,0,">1 nonsynonymous","I142F T201Q",2
"lib1","SARS-CoV-2","TTACGAAGAACGCCAA",2,10.93,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13M F62W V77I E135L",4
"lib1","SARS-CoV-2","TTACGAAGCGACGAAT",13,111.4,6.18,-4.58,0.38,1.5,1.13,0.01,">1 nonsynonymous","F12H I88S D112G R124L S147T G155F L162V",7
"lib1","SARS-CoV-2","TTACGAAGGTAGATCA",2,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F99C",2
"lib1","SARS-CoV-2","TTACGAAGTAAAGAGT",3,111.29,10.07,-0.7,0.07,2.31,1.05,0,">1 nonsynonymous","P96C K198T",2
"lib1","SARS-CoV-2","TTACGAATAAACTTAT",2,9.33,10.11,-0.66,0.11,2.87,1,0,">1 nonsynonymous","K87G D98S K198M",3
"lib1","SARS-CoV-2","TTACGAATAAAGACAG",4,7,7.51,-3.26,0.43,1.5,1.03,0.05,">1 nonsynonymous","L60S D98I N118K",3
"lib1","SARS-CoV-2","TTACGAATAATTAGTA",3,79.23,10.22,-0.54,0.05,2.87,1.03,0,">1 nonsynonymous","Y121N T201R",2
"lib1","SARS-CoV-2","TTACGAATACATACCA",11,3.76,NA,NA,NA,NA,NA,NA,"stop","E10Y S29F G86V F99*",4
"lib1","SARS-CoV-2","TTACGAATACCTCCTA",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T I142S",2
"lib1","SARS-CoV-2","TTACGAATGTCCCAAA",6,94.51,8.06,-2.7,0.21,1.63,1.11,0.02,">1 nonsynonymous","G86S F126I",2
"lib1","SARS-CoV-2","TTACGACACCAGCTAG",4,34.76,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y21V V103L L131N S139D",4
"lib1","SARS-CoV-2","TTACGACCGTGACGGC",1,1.37,NA,NA,NA,NA,NA,NA,"stop","D97* S139N T201L",3
"lib1","SARS-CoV-2","TTACGACGAAGCCCGC",1,80.22,9.89,-0.88,0.08,1.95,1.07,0,">1 nonsynonymous","S69K K199C",2
"lib1","SARS-CoV-2","TTACGACTAACCTCTA",1,8.28,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","G9Q N120L D137T G146K",4
"lib1","SARS-CoV-2","TTACGACTTACATTGA",8,191.48,10.3,-0.47,0.04,2.86,1.03,0,">1 nonsynonymous","N64V N120L P149M",3
"lib1","SARS-CoV-2","TTACGAGAAGCACCTT",11,93.44,8.49,-2.27,0.12,2.85,1.05,0.01,">1 nonsynonymous","C61S T85V F156Y Q163D",4
"lib1","SARS-CoV-2","TTACGAGCAATTACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41W Q84* Y119L",3
"lib1","SARS-CoV-2","TTACGAGCAGACAATA",3,99.39,10.69,-0.08,0.06,2.86,1.11,0,"1 nonsynonymous","L122G",1
"lib1","SARS-CoV-2","TTACGAGTTAGTGCAA",6,65.25,10.37,-0.4,0.02,2.95,1,0,">1 nonsynonymous","A22E S41R N151S",3
"lib1","SARS-CoV-2","TTACGATACATGCTCA",6,118.55,10.64,-0.12,0.06,2.84,1.09,0,">1 nonsynonymous","N4D A14N",2
"lib1","SARS-CoV-2","TTACGATACCTGAAAC",7,167.71,10.85,0.09,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACGATACGATGGTC",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72C V103S S113A Q144H T170S R179G",6
"lib1","SARS-CoV-2","TTACGATAGACACCAA",3,95.25,8.63,-2.13,0.11,2.76,1.06,0,">1 nonsynonymous","P7Q N157L T201Q",3
"lib1","SARS-CoV-2","TTACGATATTTACAAC",2,6.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q C61G L122C S139R L183N",5
"lib1","SARS-CoV-2","TTACGATCTACTAAGA",5,311.68,10.73,-0.03,0.06,2.87,1.09,0,">1 nonsynonymous","A33F K48R",2
"lib1","SARS-CoV-2","TTACGATGAACATTGA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A14* W106L F134S",3
"lib1","SARS-CoV-2","TTACGATGACGCCGCC",3,61.78,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","N4I A33P V71A F134E",4
"lib1","SARS-CoV-2","TTACGATGATAACTTA",3,29.51,10.72,-0.04,0.05,2.93,1.02,0,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","TTACGATTAAACAACA",5,46.88,9.96,-0.8,0.12,2.25,1.03,0.01,">1 nonsynonymous","T15F V32G",2
"lib1","SARS-CoV-2","TTACGATTGGAACCTT",1,1.02,NA,NA,NA,NA,NA,NA,"stop","A14* F62L T85C I138Q P149S L162G",6
"lib1","SARS-CoV-2","TTACGCAAAAAAGTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* F44L S139D G152S",4
"lib1","SARS-CoV-2","TTACGCAAATATATAT",1,11.94,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","A33R P177Y",2
"lib1","SARS-CoV-2","TTACGCACACCCACAA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","T3R R124* P149Y",3
"lib1","SARS-CoV-2","TTACGCACCTTCAAAC",3,27.36,6.19,-4.57,0.54,1.5,1.1,0.01,">1 nonsynonymous","V71K I104L",2
"lib1","SARS-CoV-2","TTACGCAGAGGTACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A33P K48* N107M",3
"lib1","SARS-CoV-2","TTACGCAGATAAAAAC",6,46.98,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S19M I88T L125V",3
"lib1","SARS-CoV-2","TTACGCATAGGACTAG",5,41.3,6.67,-4.1,0.38,1.5,1.17,0.02,">1 nonsynonymous","G117I F185P",2
"lib1","SARS-CoV-2","TTACGCCATGATAACG",2,28.25,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","W23S V37L N64T I80Q G116Y F134T P149N",7
"lib1","SARS-CoV-2","TTACGCCCACTCATGG",1,39.58,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28M Y66A G116R L122K L131F G155Y",6
"lib1","SARS-CoV-2","TTACGCCCAGCTCTAC",5,34.28,9.34,-1.43,0.3,1.5,1,0.04,">1 nonsynonymous","R25T D90K D98Q",3
"lib1","SARS-CoV-2","TTACGCCCTAACCGAC",1,38.09,10.26,-0.5,0.06,2.82,1,0,">1 nonsynonymous","F8L A14R G146A",3
"lib1","SARS-CoV-2","TTACGCCTGTAGCCTT",4,101.81,10.79,0.02,0.06,2.94,1.04,0,"1 nonsynonymous","A190S",1
"lib1","SARS-CoV-2","TTACGCGATAAGTCGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTACGCTAATAATTAC",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y V65E L122K E186A",4
"lib1","SARS-CoV-2","TTACGCTACCCTCTAA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","T85* F126V E141* L162D V173L",5
"lib1","SARS-CoV-2","TTACGCTATACTTATT",2,48.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6V C49T D68R N120M",4
"lib1","SARS-CoV-2","TTACGCTGCATTATAA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y35R D90I T170* T201M",4
"lib1","SARS-CoV-2","TTACGCTTAAGTTGAA",1,8.83,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","E10S P96A N107C N120C F160L T170H",6
"lib1","SARS-CoV-2","TTACGGAATACCACAA",10,50.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V103G N118S",2
"lib1","SARS-CoV-2","TTACGGACCAATATAT",2,45.05,10.77,0,0.05,2.86,1.11,0,"1 nonsynonymous","K128R",1
"lib1","SARS-CoV-2","TTACGGATAATCATCC",3,55.17,10.53,-0.24,0.08,2.96,1.02,0,"1 nonsynonymous","A33T",1
"lib1","SARS-CoV-2","TTACGGCTAATTGCCT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","P7S V37A L162I T170*",4
"lib1","SARS-CoV-2","TTACGGCTCCAAATGG",2,8.95,9.28,-1.48,0.42,1.5,1.1,0.05,">1 nonsynonymous","W23S L60E",2
"lib1","SARS-CoV-2","TTACGGCTCTTGCACC",3,61.24,9.02,-1.75,0.12,2.48,1.13,0,">1 nonsynonymous","Y35V L125C E135M",3
"lib1","SARS-CoV-2","TTACGGGAATAAGATA",3,87.3,10.17,-0.59,0.07,2.95,1.02,0,">1 nonsynonymous","N58Q P169M",2
"lib1","SARS-CoV-2","TTACGGGCTTACGAAT",2,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T A89N F156M",3
"lib1","SARS-CoV-2","TTACGGGGTGAAATAA",1,19.59,10.33,-0.43,0.1,2.9,1,0,"1 nonsynonymous","Y91I",1
"lib1","SARS-CoV-2","TTACGGGTCCTAAATC",4,1.83,NA,NA,NA,NA,NA,NA,"stop","V65T Y175* P191* P197*",4
"lib1","SARS-CoV-2","TTACGGTTAATAGCAG",12,180.13,7.1,-3.66,0.18,1.5,1.15,0.01,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","TTACGGTTACGATCCA",2,80.25,8.94,-1.82,0.07,2.25,1.11,0,">1 nonsynonymous","G9C R16P T85R F156M",4
"lib1","SARS-CoV-2","TTACGGTTCCGAACCT",2,195.59,8.66,-2.11,0.09,2.84,1.04,0,">1 nonsynonymous","T148H N157L",2
"lib1","SARS-CoV-2","TTACGGTTGCTGATGC",17,115.23,8.81,-1.96,0.17,1.5,1.15,0.01,">1 nonsynonymous","F8N F62S",2
"lib1","SARS-CoV-2","TTACGTAAAAGAGGAA",1,16.56,8.18,-2.58,0.25,1.5,1.26,0.02,">1 nonsynonymous","V37A T85P W106L",3
"lib1","SARS-CoV-2","TTACGTAAACATAGCG",1,15.8,10.21,-0.55,0.11,2.73,1.05,0.01,">1 nonsynonymous","F8Y P54D C61L S200E",4
"lib1","SARS-CoV-2","TTACGTAAACTTAAAA",2,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L G166L A190D",3
"lib1","SARS-CoV-2","TTACGTAAGTACATGA",5,34.37,6.38,-4.38,0.59,1.5,1.26,0.03,">1 nonsynonymous","L60T A105T N118T S184R",4
"lib1","SARS-CoV-2","TTACGTAATAATCCCA",5,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V F70L E76G G117R Q168R",5
"lib1","SARS-CoV-2","TTACGTACCTACTCGT",1,33.43,10.68,-0.09,0.06,2.92,1.02,0,"1 nonsynonymous","K56L",1
"lib1","SARS-CoV-2","TTACGTACGCATAAAT",3,59.81,10.22,-0.54,0.05,2.96,1.01,0,">1 nonsynonymous","A33S L60G",2
"lib1","SARS-CoV-2","TTACGTAGGGAAGTAA",7,62.48,6.34,-4.43,0.7,1.5,1.24,0.03,">1 nonsynonymous","I2P F62N A105N",3
"lib1","SARS-CoV-2","TTACGTATATAGATAA",2,12.67,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","W23H G86T L125F F134P F167G",5
"lib1","SARS-CoV-2","TTACGTCAAAGGATAC",1,17.28,8.2,-2.57,0.27,1.73,1.28,0.04,">1 nonsynonymous","F8W A33P V52D K87G N130L",5
"lib1","SARS-CoV-2","TTACGTCAATTTTACG",3,32.07,10.28,-0.48,0.13,2.44,1.02,0.01,"1 nonsynonymous","I72T",1
"lib1","SARS-CoV-2","TTACGTCACAAGGGAC",2,10.19,10.12,-0.65,0.12,2.67,1,0.01,">1 nonsynonymous","S29E A42S D97P E141G T148I E154S",6
"lib1","SARS-CoV-2","TTACGTGAAATGCAGT",1,21.4,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","K56R K94I G117Q G166V",4
"lib1","SARS-CoV-2","TTACGTGATCCGATAG",5,62,10.61,-0.16,0.06,2.85,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACGTGGCGCCGTAA",2,59.24,10.61,-0.15,0.07,2.93,1.04,0,"1 nonsynonymous","F156W",1
"lib1","SARS-CoV-2","TTACGTTAAGTCCCGA",3,78.14,10.7,-0.07,0.05,2.92,1.03,0,"1 nonsynonymous","A18Q",1
"lib1","SARS-CoV-2","TTACGTTAGCCAGTGT",2,1.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153D",1
"lib1","SARS-CoV-2","TTACGTTCCGTATAGG",3,0.49,NA,NA,NA,NA,NA,NA,"stop","A145D C195*",2
"lib1","SARS-CoV-2","TTACGTTGATATCCTA",3,77.99,10.66,-0.1,0.05,2.98,1,0,">1 nonsynonymous","S19N V173K",2
"lib1","SARS-CoV-2","TTACGTTTAACCTAGT",3,17.14,6,-4.76,2,1.5,1.1,0.01,"1 nonsynonymous","F167A",1
"lib1","SARS-CoV-2","TTACGTTTACATTTAC",1,36.98,10.81,0.04,0.06,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTACGTTTGAAAATAG",5,46.59,6,-4.76,2,1.74,1.17,0.01,">1 nonsynonymous","A81C G117D A145R C158L",4
"lib1","SARS-CoV-2","TTACTAAAAAACGATG",9,115.14,10.74,-0.02,0.05,2.9,1.04,0,">1 nonsynonymous","T55P T201P",2
"lib1","SARS-CoV-2","TTACTAAAACCCTGTC",3,30.07,8.93,-1.84,0.16,1.75,1.18,0.01,">1 nonsynonymous","A18Y V37L W106V F156M",4
"lib1","SARS-CoV-2","TTACTAAAACGAACGC",3,28.34,6,-4.76,2,1.5,1.18,0.02,"1 nonsynonymous","N92V",1
"lib1","SARS-CoV-2","TTACTAAACACAAGAA",9,133.08,10.53,-0.23,0.05,2.89,1.04,0,">1 nonsynonymous","A42T G83Q",2
"lib1","SARS-CoV-2","TTACTAAAGCAGTAAG",2,68.63,10.17,-0.6,0.06,2.81,1,0,">1 nonsynonymous","N64T A105M",2
"lib1","SARS-CoV-2","TTACTAAATAAGAGGC",2,0.85,NA,NA,NA,NA,NA,NA,"stop","D98F N107R F126G R179*",4
"lib1","SARS-CoV-2","TTACTAAATCATTACG",3,34.84,8.77,-1.99,0.35,1.5,1.04,0.05,">1 nonsynonymous","L38R T55G A81S",3
"lib1","SARS-CoV-2","TTACTAACACATTCGC",6,7.98,NA,NA,NA,NA,NA,NA,"stop","L95* E141T",2
"lib1","SARS-CoV-2","TTACTAACTAAAATGT",2,13.29,10.23,-0.53,0.04,2.94,1.04,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","TTACTAACTGCATGAT",5,45.15,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9C T46V F99R L125T",4
"lib1","SARS-CoV-2","TTACTAAGAATACAAC",1,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42I",1
"lib1","SARS-CoV-2","TTACTAAGATAAAAAA",3,56.78,10,-0.76,0.1,2.5,1.02,0,">1 nonsynonymous","C6F A33I D98F",3
"lib1","SARS-CoV-2","TTACTAAGGTGAACCT",2,15.94,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C6P T100N Q176G S200L",4
"lib1","SARS-CoV-2","TTACTAAGTAAAATCT",5,58.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P L57R I104A N120G A145C P149H",6
"lib1","SARS-CoV-2","TTACTAATACATACCC",1,63.79,10.35,-0.42,0.06,2.7,1.07,0,">1 nonsynonymous","L5H T201L",2
"lib1","SARS-CoV-2","TTACTAATAGATATTC",6,39.96,6.26,-4.5,0.46,1.5,1.15,0.01,">1 nonsynonymous","S45F D97Q Y119R P149W G155V",5
"lib1","SARS-CoV-2","TTACTAATCACTAGAT",3,21.62,6,-4.76,2,3,1.09,0,">1 nonsynonymous","P96K P177T",2
"lib1","SARS-CoV-2","TTACTAATCAGGAAAG",18,181.62,10.51,-0.26,0.03,2.9,1,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","TTACTAATTACGAGAC",1,35.13,6,-4.76,1.53,1.5,1.28,0.03,">1 nonsynonymous","Y93L K132M",2
"lib1","SARS-CoV-2","TTACTAATTGCACACT",2,75.06,7.15,-3.61,0.23,1.86,1.23,0.01,">1 nonsynonymous","K87V P161H",2
"lib1","SARS-CoV-2","TTACTACAGATAGAAA",1,40.31,10.73,-0.03,0.09,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTACCCTCCCGCA",4,23.1,6,-4.76,2,1.5,1.24,0.06,">1 nonsynonymous","V11Y G51N V71E V103M G116W L125Y P133Q L187K",8
"lib1","SARS-CoV-2","TTACTACCTGCGAATT",5,88.36,9.34,-1.42,0.09,2.87,1.07,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TTACTACGGAAGAATA",3,15.95,7.7,-3.07,0.42,1.5,1.03,0.07,">1 nonsynonymous","P82V S139C",2
"lib1","SARS-CoV-2","TTACTACGGAGAGGTG",4,36.15,6.06,-4.7,1.13,1.5,1.16,0.02,">1 nonsynonymous","N92L G116E",2
"lib1","SARS-CoV-2","TTACTACGGGTGAATA",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K Y50S P96A D112Q G152L F156Q",6
"lib1","SARS-CoV-2","TTACTACTAGAGATAT",2,36.5,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","S108V D137L F160N",3
"lib1","SARS-CoV-2","TTACTACTTTTAGTAT",1,13.2,9.7,-1.07,0.11,2.61,1.1,0.01,">1 nonsynonymous","L60N R78M K128F",3
"lib1","SARS-CoV-2","TTACTAGACTACTAGA",9,20.09,7.05,-3.72,0.38,1.5,1.15,0.05,">1 nonsynonymous","A14M V65L I88M",3
"lib1","SARS-CoV-2","TTACTAGCATACATCT",2,11.39,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","F99M G117K L122P",3
"lib1","SARS-CoV-2","TTACTAGGAGGTACAA",2,27.58,8.77,-1.99,0.15,2.84,1.15,0,">1 nonsynonymous","S41A F126A",2
"lib1","SARS-CoV-2","TTACTAGTACATTTAT",7,1.56,NA,NA,NA,NA,NA,NA,"stop","C61R C102* I104Y I142K",4
"lib1","SARS-CoV-2","TTACTAGTCCCAAAAA",3,9,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","I88N W106Q R124M",3
"lib1","SARS-CoV-2","TTACTAGTGAAGCAAC",5,60.73,8.84,-1.93,0.16,1.73,1.14,0.01,">1 nonsynonymous","A18V S41N T46M A89N T201F",5
"lib1","SARS-CoV-2","TTACTAGTTATAATTT",4,46.94,9.74,-1.03,0.11,2.38,1.07,0.01,">1 nonsynonymous","L5V A89H",2
"lib1","SARS-CoV-2","TTACTAGTTCCAAGAC",13,163.65,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38H V52F V77Y W106P Y119S G155S",6
"lib1","SARS-CoV-2","TTACTAGTTTGGATTT",1,10.38,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N1Y Y93H E141Q P177T",4
"lib1","SARS-CoV-2","TTACTAGTTTTAGAAA",8,62.68,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","D112A Q176K",2
"lib1","SARS-CoV-2","TTACTATAATATATCA",1,31.39,10.99,0.22,0.11,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTATACTCATACT",3,23.69,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A105R R124Q P149V",3
"lib1","SARS-CoV-2","TTACTATAGCCTATGA",2,1.09,NA,NA,NA,NA,NA,NA,"stop","I28* S41Y N58E",3
"lib1","SARS-CoV-2","TTACTATATGAAAACA",5,0.36,NA,NA,NA,NA,NA,NA,"stop","V20A S43*",2
"lib1","SARS-CoV-2","TTACTATATGCGCTGT",4,46.21,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","Y39T R136S C150Y",3
"lib1","SARS-CoV-2","TTACTATCAAAAACTA",2,18.18,6.18,-4.58,0.71,3,1.19,0.02,">1 nonsynonymous","F44Y A89P V182E",3
"lib1","SARS-CoV-2","TTACTATCACGGGAGG",4,14.42,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G51V G86C L122K",3
"lib1","SARS-CoV-2","TTACTATGCAGCAGCG",2,6.68,6.18,-4.58,2,1.5,1.23,0.05,">1 nonsynonymous","A14T S45L Y50I",3
"lib1","SARS-CoV-2","TTACTATTGAATTTAC",7,211.65,8.24,-2.53,0.13,2.43,1.12,0.01,"1 nonsynonymous","Y143R",1
"lib1","SARS-CoV-2","TTACTATTGACTTAAG",7,39.45,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","S29E A42N P96G E141K Y165D G174L",6
"lib1","SARS-CoV-2","TTACTATTTTACATTC",2,26.42,10.81,0.04,0.1,2.88,1.12,0,"synonymous","",0
"lib1","SARS-CoV-2","TTACTATTTTATTCCT",4,34.03,10.79,0.02,0.1,2.89,1.06,0,">1 nonsynonymous","V115T S147P",2
"lib1","SARS-CoV-2","TTACTCAAAACCCGGA",1,10.67,7.55,-3.21,0.39,1.5,1.01,0.04,">1 nonsynonymous","P96V N120S V153S P161Y",4
"lib1","SARS-CoV-2","TTACTCAACAATAGTG",8,139.28,9.91,-0.85,0.11,2.28,1.04,0,">1 nonsynonymous","F44P D90T",2
"lib1","SARS-CoV-2","TTACTCAAGAAGCAAC",1,38.63,10.35,-0.41,0.06,2.95,1,0,">1 nonsynonymous","I2V S139L S164P T201Y",4
"lib1","SARS-CoV-2","TTACTCAAGTCACCAA",5,38.53,10.51,-0.25,0.07,2.96,1.01,0,"1 nonsynonymous","L95V",1
"lib1","SARS-CoV-2","TTACTCACACACGGGA",3,3.58,NA,NA,NA,NA,NA,NA,"stop","K56A N118C K198*",3
"lib1","SARS-CoV-2","TTACTCACAGTGGAAT",1,22.04,10.58,-0.18,0.06,2.88,1.09,0,">1 nonsynonymous","N1L Y39F C61K",3
"lib1","SARS-CoV-2","TTACTCACCGTTGTAA",2,24.11,9.89,-0.87,0.14,2.34,1.07,0.01,"1 nonsynonymous","W106L",1
"lib1","SARS-CoV-2","TTACTCACTTGTGGTG",4,78.56,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T55E F62Q P82Y Q176Y F185S",5
"lib1","SARS-CoV-2","TTACTCAGCACTCTTA",3,7.31,10.58,-0.18,0.09,2.96,1,0,">1 nonsynonymous","A42S F62G",2
"lib1","SARS-CoV-2","TTACTCAGCGAATCCA",6,45.09,10.62,-0.15,0.06,2.8,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTCATACAAAAAC",3,28.76,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89E V115W S129M",3
"lib1","SARS-CoV-2","TTACTCATCCCTCGAA",3,140.13,10.7,-0.07,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTCATGCACTATT",12,13.22,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15W G86L V180S",3
"lib1","SARS-CoV-2","TTACTCCATAAAAGGA",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T D68M N171H",3
"lib1","SARS-CoV-2","TTACTCCATCAGGCTG",15,162.43,9.59,-1.18,0.08,2.21,1.11,0,"1 nonsynonymous","D112V",1
"lib1","SARS-CoV-2","TTACTCCCCGACAGCT",8,99.08,10.75,-0.01,0.08,2.86,1.09,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","TTACTCCCTGCTTGCT",2,18.09,6,-4.76,2,1.5,1.08,0.04,">1 nonsynonymous","Y93N F99S S139I",3
"lib1","SARS-CoV-2","TTACTCCTCTAACTAG",1,20.76,9.99,-0.77,0.14,1.94,1.07,0.02,">1 nonsynonymous","W106A T201W",2
"lib1","SARS-CoV-2","TTACTCGAGGCTCCTG",1,0.89,NA,NA,NA,NA,NA,NA,"stop","S19E F47L R78H D112L F156* Y165S T201R",7
"lib1","SARS-CoV-2","TTACTCGGACGCACAT",1,6.22,6.35,-4.42,0.9,3,1.03,0.01,">1 nonsynonymous","S41E Q79H D98Q W106R",4
"lib1","SARS-CoV-2","TTACTCTAATCGGGTA",12,82.71,10.74,-0.02,0.06,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTCTACGTAGTAT",2,2.08,NA,NA,NA,NA,NA,NA,"stop","Y21* S139C F156R",3
"lib1","SARS-CoV-2","TTACTCTATAAGATGG",1,11.77,9.03,-1.73,0.25,1.5,1.04,0.03,">1 nonsynonymous","T3S S36H G86N",3
"lib1","SARS-CoV-2","TTACTCTATGCCCTGG",2,42.84,6,-4.76,2,1.5,1.2,0.04,">1 nonsynonymous","N107Q L131S S139M S164Y A192V",5
"lib1","SARS-CoV-2","TTACTCTCAGTGAAAC",1,12.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6A D137H",2
"lib1","SARS-CoV-2","TTACTCTCTTGCCTGC",8,163.13,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K48A K94S T140I N157V K198H",5
"lib1","SARS-CoV-2","TTACTCTTGGATATTA",5,85.94,10.78,0.02,0.06,2.92,1.05,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TTACTCTTTAAGACTG",4,0.1,NA,NA,NA,NA,NA,NA,"stop","F99T A105* T201Y",3
"lib1","SARS-CoV-2","TTACTGAAACTGTAAC",4,40.73,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","L38S C49N",2
"lib1","SARS-CoV-2","TTACTGAAGTATTAAT",1,17.05,6,-4.76,2,3,1.11,0.03,">1 nonsynonymous","C6G F12P S129T L162N N171I",5
"lib1","SARS-CoV-2","TTACTGACAAAAAAAA",4,46.84,9.09,-1.67,0.11,2.49,1.08,0,">1 nonsynonymous","T63L D75I Q84V",3
"lib1","SARS-CoV-2","TTACTGACAAATCAAA",1,15.3,10.89,0.12,0.1,2.98,1,0.01,"1 nonsynonymous","T3Q",1
"lib1","SARS-CoV-2","TTACTGACACCATTTA",1,14.24,10.52,-0.24,0.06,2.94,1,0,">1 nonsynonymous","P7L N40R T201L",3
"lib1","SARS-CoV-2","TTACTGACATTAAACT",1,30.25,8.66,-2.1,0.12,2.51,1.17,0.01,">1 nonsynonymous","D97N A145N",2
"lib1","SARS-CoV-2","TTACTGACATTGAACG",3,41.36,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R127P G146K G166T",3
"lib1","SARS-CoV-2","TTACTGACGAGAGTTT",3,12.53,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T15G S43T G74R K132W K199M",5
"lib1","SARS-CoV-2","TTACTGACGTTCTATA",7,103.68,9.25,-1.51,0.08,2.8,1.14,0,">1 nonsynonymous","Y121L G166R",2
"lib1","SARS-CoV-2","TTACTGACTCTAAGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57K V103L T201I",3
"lib1","SARS-CoV-2","TTACTGAGTTCACAAT",2,20.98,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C49K W106A S139T",3
"lib1","SARS-CoV-2","TTACTGAGTTGTATCT",2,15.2,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L95W N107S G174V T201M",4
"lib1","SARS-CoV-2","TTACTGATTTATGAAC",2,3.03,NA,NA,NA,NA,NA,NA,"stop","N40* F126N A190F",3
"lib1","SARS-CoV-2","TTACTGATTTTAGGAG",1,21.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L E10V P54L L131S V182S",5
"lib1","SARS-CoV-2","TTACTGCCAGCCTGCT",2,19.67,8.32,-2.44,0.21,1.84,1.09,0.02,"1 nonsynonymous","D112Y",1
"lib1","SARS-CoV-2","TTACTGCCCATTTTTA",1,14.03,8.46,-2.3,0.34,1.5,1.11,0.05,">1 nonsynonymous","P82S K87S",2
"lib1","SARS-CoV-2","TTACTGCCGGTTTACA",3,62.61,8.34,-2.42,0.25,1.52,1.19,0.02,"1 nonsynonymous","D112N",1
"lib1","SARS-CoV-2","TTACTGCTATAAACAA",14,115.17,10.63,-0.13,0.05,2.89,1.06,0,">1 nonsynonymous","N4G E141S",2
"lib1","SARS-CoV-2","TTACTGGAAGACTTTA",1,31.85,9.78,-0.98,0.09,2.44,1.02,0,">1 nonsynonymous","G86D P197T",2
"lib1","SARS-CoV-2","TTACTGGCTGCAATTA",13,172.46,10.72,-0.05,0.05,2.87,1.04,0,"1 nonsynonymous","S43F",1
"lib1","SARS-CoV-2","TTACTGGGAGTTACTT",3,20.36,10.58,-0.18,0.06,2.89,1.03,0,"1 nonsynonymous","G116T",1
"lib1","SARS-CoV-2","TTACTGGTATCGATTG",3,0,NA,NA,NA,NA,NA,NA,"stop","L60S K94R W106* Y159A K198F",5
"lib1","SARS-CoV-2","TTACTGGTATTAGTTA",3,76.06,8.61,-2.16,0.16,1.91,1.2,0.01,">1 nonsynonymous","F62C N107H",2
"lib1","SARS-CoV-2","TTACTGGTCGGCAGGG",2,41.7,6,-4.76,2,1.5,1.1,0.03,">1 nonsynonymous","Q144F Y165I",2
"lib1","SARS-CoV-2","TTACTGGTTTTATTCG",4,37,7.79,-2.97,0.18,1.5,1.12,0.01,">1 nonsynonymous","F12L L38T D90M",3
"lib1","SARS-CoV-2","TTACTGTATCAGGACG",4,67.02,9.29,-1.47,0.08,1.99,1.13,0,">1 nonsynonymous","V37R Y121V S139D",3
"lib1","SARS-CoV-2","TTACTGTCTTGTTTCT",6,35.26,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G51D K94D D112W R127L S184E",5
"lib1","SARS-CoV-2","TTACTGTGGCCCGTCA",1,8.77,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","C6V V20Q D90K A145V",4
"lib1","SARS-CoV-2","TTACTGTTCACGTACT",2,0.06,NA,NA,NA,NA,NA,NA,"stop","K48* D90C",2
"lib1","SARS-CoV-2","TTACTTAAAAATAGCT",1,27.3,10.74,-0.02,0.1,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTACTTAAGAAGGAAA",5,90.72,10.26,-0.51,0.03,2.88,1.06,0,">1 nonsynonymous","P149N G174L",2
"lib1","SARS-CoV-2","TTACTTACCAGTACAC",4,101.82,10.66,-0.1,0.05,2.9,1.03,0,"1 nonsynonymous","A33M",1
"lib1","SARS-CoV-2","TTACTTAGCATAACAT",5,60.55,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","V20L T55R D90T G166L",4
"lib1","SARS-CoV-2","TTACTTAGCATAATTT",4,48.24,9.95,-0.82,0.13,1.87,1.09,0.01,">1 nonsynonymous","K94Y A192K",2
"lib1","SARS-CoV-2","TTACTTATGTCCCGTC",1,40.63,6,-4.76,2,3,1.19,0,">1 nonsynonymous","G83W G101D Y175S",3
"lib1","SARS-CoV-2","TTACTTATTCACCTCA",1,8.54,10.51,-0.25,0.11,2.91,1.15,0.01,"1 nonsynonymous","V37I",1
"lib1","SARS-CoV-2","TTACTTCAGTTCTAGG",4,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A33D C49R R127T",4
"lib1","SARS-CoV-2","TTACTTCATGACTAGC",10,192.04,8.92,-1.85,0.05,2.85,1.1,0,">1 nonsynonymous","K87R Y143V",2
"lib1","SARS-CoV-2","TTACTTCCGGACTCGC",6,1.31,NA,NA,NA,NA,NA,NA,"stop","L5V T100* L122R",3
"lib1","SARS-CoV-2","TTACTTCGTTGTATCT",4,43.01,10.74,-0.03,0.06,2.91,1.01,0,">1 nonsynonymous","A14K K56Q",2
"lib1","SARS-CoV-2","TTACTTCTCGATCACT",1,5.27,10.8,0.04,0.18,2.98,1,0.02,"synonymous","",0
"lib1","SARS-CoV-2","TTACTTGAAATATCGA",3,43.98,10.58,-0.18,0.04,2.9,1.04,0,">1 nonsynonymous","T3Y K94R",2
"lib1","SARS-CoV-2","TTACTTGAATAGTTCG",2,0,NA,NA,NA,NA,NA,NA,"stop","K114* V173A K199R",3
"lib1","SARS-CoV-2","TTACTTGCCATAACCC",1,12.64,6.15,-4.62,2,1.5,1.03,0.01,">1 nonsynonymous","D34E G117K S139V",3
"lib1","SARS-CoV-2","TTACTTGCGATTAACC",6,73.78,7.91,-2.85,0.21,1.5,1.13,0.02,">1 nonsynonymous","A81L K132L Q144T",3
"lib1","SARS-CoV-2","TTACTTGTACAAATAC",7,63.12,6,-4.76,0.66,1.5,1.16,0.01,">1 nonsynonymous","I2P C158F T193Y V194G",4
"lib1","SARS-CoV-2","TTACTTGTTTCGTCCA",2,24.45,9.65,-1.11,0.1,2.89,1.03,0,">1 nonsynonymous","K48N Y119S",2
"lib1","SARS-CoV-2","TTACTTTAAAACGAGT",1,8.85,10.66,-0.1,0.11,2.95,1.04,0.01,"1 nonsynonymous","K26M",1
"lib1","SARS-CoV-2","TTACTTTATATTGATC",1,0,NA,NA,NA,NA,NA,NA,"stop","N4S D59A Q84* G152F",4
"lib1","SARS-CoV-2","TTACTTTGATATACGG",1,30.27,10.13,-0.64,0.12,2.4,1.14,0.01,">1 nonsynonymous","L5R D34S N64K",3
"lib1","SARS-CoV-2","TTACTTTGCCAGGTTT",2,24.5,10.57,-0.2,0.06,2.91,1.03,0,">1 nonsynonymous","T55N V115N S139T",3
"lib1","SARS-CoV-2","TTACTTTTGCATCCCA",2,8.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","G86R G155I",2
"lib1","SARS-CoV-2","TTACTTTTGCTATGAC",2,10.8,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","I88D K128Q",2
"lib1","SARS-CoV-2","TTAGAAAAAAAAACCT",1,35.19,10.42,-0.35,0.06,2.85,1.04,0,">1 nonsynonymous","V32G A192I",2
"lib1","SARS-CoV-2","TTAGAAAAAACCTTGG",4,57.61,10.76,0,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGAAAACTGCGTAA",2,35.81,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","Y121S P133R P169M",3
"lib1","SARS-CoV-2","TTAGAAAAGACATATT",3,32.4,10.78,0.02,0.07,2.94,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGAAACAAACCCAT",1,13.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14V S19G D90N K128R",4
"lib1","SARS-CoV-2","TTAGAAACAATTCCTA",1,7.58,9.88,-0.88,0.15,2.52,1.04,0.01,">1 nonsynonymous","N1Y F44L L60T",3
"lib1","SARS-CoV-2","TTAGAAACAGAATAAC",1,6.47,10.74,-0.03,0.09,2.85,1.1,0.01,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","TTAGAAACATTATGCA",6,18.67,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","I2D D90P T201K",3
"lib1","SARS-CoV-2","TTAGAAACCATACCCA",3,47.97,10.65,-0.11,0.07,2.93,1.03,0,"1 nonsynonymous","K56R",1
"lib1","SARS-CoV-2","TTAGAAACGTACCTGA",5,140.45,9.75,-1.02,0.1,1.95,1.08,0,">1 nonsynonymous","D90Y D98P N120Q",3
"lib1","SARS-CoV-2","TTAGAAACTTTAAAAA",6,24.28,8.04,-2.72,0.18,1.5,1.12,0.01,">1 nonsynonymous","R127T E141K T148R",3
"lib1","SARS-CoV-2","TTAGAAAGAACTAAAA",4,77.44,9.43,-1.33,0.07,2.57,1.06,0,">1 nonsynonymous","F12L Y91W",2
"lib1","SARS-CoV-2","TTAGAAAGACCATAAA",11,101.08,10.76,-0.01,0.06,2.87,1.06,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","TTAGAAAGACTGAAAT",2,9.68,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","F17H Y35T Q84K K132A L162K",5
"lib1","SARS-CoV-2","TTAGAAATAAACCCAG",5,1.07,NA,NA,NA,NA,NA,NA,"stop","R25K V103* E141L",3
"lib1","SARS-CoV-2","TTAGAAATATGCGTTG",2,10.58,6.71,-4.05,0.4,1.5,1.29,0.03,">1 nonsynonymous","F44V Y175L",2
"lib1","SARS-CoV-2","TTAGAAATATTTCAAA",5,1.12,NA,NA,NA,NA,NA,NA,"stop","R73M F99I T170S Y175*",4
"lib1","SARS-CoV-2","TTAGAAATCAGTATGT",2,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153N",1
"lib1","SARS-CoV-2","TTAGAAATCCGCTTAT",1,45.37,9.44,-1.33,0.1,2.74,1.22,0,">1 nonsynonymous","R27Q Y119G",2
"lib1","SARS-CoV-2","TTAGAAATCGCGCCAA",4,5.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S C49S T55C Y123T S200G",5
"lib1","SARS-CoV-2","TTAGAAATTAACATAT",2,25.71,10.91,0.15,0.07,2.91,1.04,0,">1 nonsynonymous","T3H S43M K128P G152R P197L",5
"lib1","SARS-CoV-2","TTAGAAATTTACAAAT",7,107.1,10.26,-0.51,0.04,2.88,1.04,0,">1 nonsynonymous","G9C G152D",2
"lib1","SARS-CoV-2","TTAGAAATTTTTATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31D A42K",2
"lib1","SARS-CoV-2","TTAGAACAAATAGGCA",2,50.2,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S36A N92V V103E",3
"lib1","SARS-CoV-2","TTAGAACAAATTAATT",4,11.65,6,-4.76,2,3,1.26,0.02,">1 nonsynonymous","G9Y D34N V77R P82V I88L Y165C",6
"lib1","SARS-CoV-2","TTAGAACAACAGTCGT",8,34.86,8.65,-2.11,0.12,2.02,1.11,0.01,">1 nonsynonymous","Y50F I142S S184L",3
"lib1","SARS-CoV-2","TTAGAACAACGCATGT",6,20.85,7.38,-3.38,0.46,1.5,1.06,0.07,">1 nonsynonymous","C6R V77F",2
"lib1","SARS-CoV-2","TTAGAACAATATTACC",7,5.33,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","N13R G83C N120R N151I L162V",5
"lib1","SARS-CoV-2","TTAGAACACCATGTAA",1,7.68,11,0.23,0.11,2.88,1.07,0,">1 nonsynonymous","T140K V173F L187R",3
"lib1","SARS-CoV-2","TTAGAACAGCGTTGGG",3,109.22,9.28,-1.48,0.12,1.87,1.09,0.01,">1 nonsynonymous","I2W K114T I138Q Y178L",4
"lib1","SARS-CoV-2","TTAGAACATATTTACT",5,46.76,6,-4.76,2,1.5,1.17,0.01,"1 nonsynonymous","G172R",1
"lib1","SARS-CoV-2","TTAGAACCACAAGTAG",1,14.26,9.23,-1.53,0.13,2.79,1.18,0.01,"1 nonsynonymous","R73N",1
"lib1","SARS-CoV-2","TTAGAACCGAATGAAT",5,17.54,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","R16Y V103R N110T",3
"lib1","SARS-CoV-2","TTAGAACCTTAATACA",2,0,NA,NA,NA,NA,NA,NA,"stop","W106* P149K P197L",3
"lib1","SARS-CoV-2","TTAGAACGAATGATCC",1,33.73,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","W23K D97I N107E",3
"lib1","SARS-CoV-2","TTAGAACGATGATAGG",1,13.54,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","A18M A89F L131S Q144A C150W",5
"lib1","SARS-CoV-2","TTAGAACGTATTATAA",6,51.06,9.62,-1.14,0.18,1.81,1.14,0.01,">1 nonsynonymous","F8P L60R",2
"lib1","SARS-CoV-2","TTAGAACTGAATAGAT",1,2.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I28Y",1
"lib1","SARS-CoV-2","TTAGAACTGTCTCCTG",8,43.76,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T3W A67D G86F G152S",4
"lib1","SARS-CoV-2","TTAGAACTTTTGGAAG",2,23.62,9.97,-0.79,0.33,1.5,1.01,0.04,">1 nonsynonymous","I2T D59F R127A G155K",4
"lib1","SARS-CoV-2","TTAGAAGAACAACAGG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","L57M Y91R G101* G152D",4
"lib1","SARS-CoV-2","TTAGAAGAAGGAGCGA",1,10.3,6,-4.76,2,1.5,1.3,0.06,">1 nonsynonymous","N40A G101V T140S V182S",4
"lib1","SARS-CoV-2","TTAGAAGAATGAAAAC",6,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I A81H V180A",3
"lib1","SARS-CoV-2","TTAGAAGACAAAAGCT",2,1.43,NA,NA,NA,NA,NA,NA,"stop","F62P T85* K128S G152F C158L",5
"lib1","SARS-CoV-2","TTAGAAGGGTTCGTAT",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A D59V G86S F99V E141D",5
"lib1","SARS-CoV-2","TTAGAAGTACCATAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* N118F L122K G152H",4
"lib1","SARS-CoV-2","TTAGAATAAAGCGTAA",4,1.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TTAGAATAAGCCGGGA",2,58.67,9.64,-1.12,0.15,1.85,1.17,0.01,">1 nonsynonymous","F8C T148G",2
"lib1","SARS-CoV-2","TTAGAATAATGAATTC",3,0.39,NA,NA,NA,NA,NA,NA,"stop","V65* I104Y Q168R",3
"lib1","SARS-CoV-2","TTAGAATACGAGCAGT",6,46.08,9.66,-1.1,0.22,1.5,1.14,0.02,">1 nonsynonymous","I72M Y123S S129A",3
"lib1","SARS-CoV-2","TTAGAATCATTAATAA",6,83.16,10.79,0.03,0.06,2.92,1.05,0,"1 nonsynonymous","T100L",1
"lib1","SARS-CoV-2","TTAGAATGGGATGAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T I104T N109Q N120K E154W L162I",6
"lib1","SARS-CoV-2","TTAGAATTTAAAACAT",7,2.22,NA,NA,NA,NA,NA,NA,"stop","D34S F62* V65F",3
"lib1","SARS-CoV-2","TTAGACAAAACGACAA",8,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P D90N Y175E",3
"lib1","SARS-CoV-2","TTAGACAAACAGTATG",4,10.1,10.44,-0.32,0.14,2.67,1.19,0.01,"1 nonsynonymous","E135S",1
"lib1","SARS-CoV-2","TTAGACAAAGTCATGC",4,36.03,8.89,-1.88,0.3,1.59,1.21,0.03,">1 nonsynonymous","T3R I28R",2
"lib1","SARS-CoV-2","TTAGACAAGCGAGAAT",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L T100D N120R",3
"lib1","SARS-CoV-2","TTAGACAAGTAACAAA",5,122.18,10.1,-0.67,0.07,2.82,1.02,0,">1 nonsynonymous","G9Q C61S G83R I138Y",4
"lib1","SARS-CoV-2","TTAGACAATCCTGATT",9,90.16,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F8E T15N A81E R136C",4
"lib1","SARS-CoV-2","TTAGACACATGGTCTG",4,74.04,6.04,-4.73,0.49,1.5,1.14,0.01,">1 nonsynonymous","V37S F44L W106P",3
"lib1","SARS-CoV-2","TTAGACACCATAAAGG",6,32.16,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22L P54Y G74V N92C N107E",5
"lib1","SARS-CoV-2","TTAGACATAGAGCCTT",3,27.6,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F17E D75M D98V S129K G155K G174S",6
"lib1","SARS-CoV-2","TTAGACATAGGTAGAC",2,28.92,6,-4.76,2,2.35,1.2,0.01,">1 nonsynonymous","N13Y I72C Y119M P169L",4
"lib1","SARS-CoV-2","TTAGACATCAGCAAAA",2,24.06,9.72,-1.05,0.12,2.57,1.1,0.01,">1 nonsynonymous","C6F K48N T63V",3
"lib1","SARS-CoV-2","TTAGACATTTGTTACC",2,47.32,9.76,-1.01,0.06,2.87,1.06,0,">1 nonsynonymous","S36A N120E Y143V",3
"lib1","SARS-CoV-2","TTAGACCAAACAGAAG",3,9.41,10.07,-0.7,0.24,2.07,1.01,0.02,">1 nonsynonymous","S41A V52P D75S",3
"lib1","SARS-CoV-2","TTAGACCAAAGATTTC",10,57.38,7.22,-3.55,0.31,1.5,1.19,0.03,">1 nonsynonymous","R124S T201S",2
"lib1","SARS-CoV-2","TTAGACCAACCCATCA",3,21.34,7.57,-3.19,0.25,1.5,1.14,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","TTAGACCAGAAACGGC",1,71.02,10.68,-0.09,0.04,2.92,1.05,0,">1 nonsynonymous","N40D S45D D59G",3
"lib1","SARS-CoV-2","TTAGACCAGAATTATT",2,16.83,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C61N A89D W106E Y143F",4
"lib1","SARS-CoV-2","TTAGACCATCGAGCCG",5,97.8,6,-4.76,2,3,1.11,0,">1 nonsynonymous","V20L A42E R127P Q168A",4
"lib1","SARS-CoV-2","TTAGACCCGAACTAAA",4,1,NA,NA,NA,NA,NA,NA,"stop","E10* F12N F44D G51S",4
"lib1","SARS-CoV-2","TTAGACCGCGGAACCG",8,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I K87E E141V",3
"lib1","SARS-CoV-2","TTAGACCTTTACCCTT",6,156.64,10.8,0.04,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGACGAACAATACC",3,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I S41C I138S E141Y G174K",5
"lib1","SARS-CoV-2","TTAGACGAACATGTAT",4,108.13,10.54,-0.22,0.04,2.97,1.02,0,">1 nonsynonymous","V37Y F156P",2
"lib1","SARS-CoV-2","TTAGACGCTCAAAGCA",7,3.58,NA,NA,NA,NA,NA,NA,"stop","Y21G C61W R73E D112* N118E F160N",6
"lib1","SARS-CoV-2","TTAGACTAACTCCGCA",2,13.75,9.76,-1,0.15,1.9,1.09,0.01,">1 nonsynonymous","A33V F44V G51D",3
"lib1","SARS-CoV-2","TTAGACTCGCGTATCG",5,2.1,NA,NA,NA,NA,NA,NA,"stop","G83R P96R N107M T201*",4
"lib1","SARS-CoV-2","TTAGACTGACTATTTT",2,6.43,9.26,-1.5,0.18,2.71,1.11,0.01,">1 nonsynonymous","A22S S139L",2
"lib1","SARS-CoV-2","TTAGACTTCGCTACTG",8,180.12,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","T55R A105P Q144I",3
"lib1","SARS-CoV-2","TTAGAGAAAGTGATAT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","S69* K114S I138L A192G",4
"lib1","SARS-CoV-2","TTAGAGAACCTAATTC",6,23.42,6,-4.76,2,1.5,1.24,0.05,">1 nonsynonymous","N58K N92V W106S L122P R136P K198P",6
"lib1","SARS-CoV-2","TTAGAGAATCAACTAA",2,44.88,10.74,-0.03,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGAGACAGGTGAGT",4,41.74,6.86,-3.9,0.4,1.5,1.12,0.03,">1 nonsynonymous","C6Y N107H S129T",3
"lib1","SARS-CoV-2","TTAGAGACCAAAGTCA",2,15.26,10.51,-0.25,0.08,2.93,1.04,0,">1 nonsynonymous","Y39C A67L",2
"lib1","SARS-CoV-2","TTAGAGACTAAAGACT",4,173.96,10.81,0.04,0.06,2.89,1.05,0,"1 nonsynonymous","R16S",1
"lib1","SARS-CoV-2","TTAGAGAGAAGCGCAA",6,0.25,NA,NA,NA,NA,NA,NA,"stop","Y39* N118S F167V",3
"lib1","SARS-CoV-2","TTAGAGAGACTCACCT",2,23.64,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A14V A81S F99V S164Q",4
"lib1","SARS-CoV-2","TTAGAGAGAGTAAGGT",2,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N F156M",2
"lib1","SARS-CoV-2","TTAGAGAGTCCCTAGA",11,112.97,8.69,-2.07,0.11,1.68,1.11,0.01,">1 nonsynonymous","I28L R78P G86Q",3
"lib1","SARS-CoV-2","TTAGAGCACCCCTGCA",5,79,9.24,-1.53,0.09,2.71,1.15,0,">1 nonsynonymous","R78A Q144V G155V",3
"lib1","SARS-CoV-2","TTAGAGCATACTGGAG",3,1.09,NA,NA,NA,NA,NA,NA,"stop","D97K P149*",2
"lib1","SARS-CoV-2","TTAGAGCATATACGCC",1,9.29,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","V37L F62P I88Q K198I",4
"lib1","SARS-CoV-2","TTAGAGCGCCTTGCAA",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S D90F D137M E186F",4
"lib1","SARS-CoV-2","TTAGAGCTAACCAATT",3,9.97,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D98L N120H E141W H189Y P191L K198Q",6
"lib1","SARS-CoV-2","TTAGAGCTGGTAAACC",1,1.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAGAGGACAGCATTC",8,60.23,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T46L T63N Y91V D137M T148N",5
"lib1","SARS-CoV-2","TTAGAGGATAAACCCC",2,21.05,7.74,-3.03,0.17,1.93,1.09,0.01,"1 nonsynonymous","D112N",1
"lib1","SARS-CoV-2","TTAGAGGCAATTGATT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T G86T P96F G146W",4
"lib1","SARS-CoV-2","TTAGAGGTCATCCGAC",3,49.17,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","D68R G83V",2
"lib1","SARS-CoV-2","TTAGAGGTTGGTTCTG",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107M T148L",2
"lib1","SARS-CoV-2","TTAGAGTACAGCTGGT",2,112.24,6.79,-3.97,0.5,1.5,1.07,0.04,"1 nonsynonymous","R124F",1
"lib1","SARS-CoV-2","TTAGAGTAGTAGGCGT",2,9.1,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","V11L F126E Q176L",3
"lib1","SARS-CoV-2","TTAGAGTCAGAAATCA",3,18.89,6,-4.76,2,3,1.17,0,">1 nonsynonymous","D34Q N64Y I88V Q168P",4
"lib1","SARS-CoV-2","TTAGAGTCATGGTCGA",5,26.47,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","D34R D97H S139D G152F Y178S",5
"lib1","SARS-CoV-2","TTAGAGTGACAATGGG",12,1.32,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","TTAGAGTTAATTTAAA",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R C61I I104T L131T S139C Q144G",6
"lib1","SARS-CoV-2","TTAGAGTTCACAAAGT",4,57,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","F12L P161L",2
"lib1","SARS-CoV-2","TTAGATAAAAATAGCA",7,85.03,8.19,-2.57,0.21,1.91,1.09,0.02,">1 nonsynonymous","L60W Y143A",2
"lib1","SARS-CoV-2","TTAGATAAAGAAAGTA",4,22.27,10.86,0.1,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGATACTACAGGGC",1,37.53,10.77,0.01,0.09,2.94,1.03,0,">1 nonsynonymous","T3N K56A",2
"lib1","SARS-CoV-2","TTAGATACTATAGGTT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAGATACTCACACCA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","F8K S36C G83S Y91H V103E L131* E141R V180R",8
"lib1","SARS-CoV-2","TTAGATAGCTAGCTCT",1,83.36,6,-4.76,2,1.5,1.37,0.03,">1 nonsynonymous","N24Y D98N A105L",3
"lib1","SARS-CoV-2","TTAGATAGTTAGTTGA",5,19.05,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","E10R D97Y A145P G152I",4
"lib1","SARS-CoV-2","TTAGATATATGAAAAA",5,6.84,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","T100D S139Y V182R",3
"lib1","SARS-CoV-2","TTAGATATATTCAAAT",8,106.35,10.13,-0.63,0.06,2.91,1.03,0,">1 nonsynonymous","I2Q V37Y F156T",3
"lib1","SARS-CoV-2","TTAGATATGATGGAAA",7,0.73,NA,NA,NA,NA,NA,NA,"stop","Y39V F44L G174*",3
"lib1","SARS-CoV-2","TTAGATATTTTGATCA",3,20.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R Q144A",2
"lib1","SARS-CoV-2","TTAGATCACCAAAGAA",9,184.06,9.39,-1.38,0.07,2.81,1.12,0,">1 nonsynonymous","K87I V115G F126L",3
"lib1","SARS-CoV-2","TTAGATCCACAATTTG",3,98.88,8.8,-1.97,0.09,2.8,1.09,0,">1 nonsynonymous","V37A Y143S",2
"lib1","SARS-CoV-2","TTAGATCCACAGACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K132N G146*",2
"lib1","SARS-CoV-2","TTAGATCCCTACCTGA",6,32.95,6.5,-4.26,0.63,1.5,1.14,0.06,">1 nonsynonymous","T46P I88T",2
"lib1","SARS-CoV-2","TTAGATCGCCTTGGTA",7,21.77,6.28,-4.49,0.37,1.78,1.14,0.01,">1 nonsynonymous","S45C V52I T100W W106A V173C",5
"lib1","SARS-CoV-2","TTAGATCTCGTCAACT",3,49.55,9.67,-1.09,0.06,2.87,1.05,0,">1 nonsynonymous","T85S S113T",2
"lib1","SARS-CoV-2","TTAGATGAAGCCAGTA",2,34575.47,8.57,-2.19,0.1,2.05,1.09,0,">1 nonsynonymous","D90Y D98F G174E",3
"lib1","SARS-CoV-2","TTAGATGACGACACAG",1,21.08,6,-4.76,2,1.5,1.26,0.07,">1 nonsynonymous","S19R K132H Q176T",3
"lib1","SARS-CoV-2","TTAGATGAGCCCACCT",2,28.89,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","L57T N92F",2
"lib1","SARS-CoV-2","TTAGATGATCCTGCCC",3,34.39,10.67,-0.1,0.08,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGATGCCCTTCCTA",1,14.77,10.54,-0.22,0.1,3,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGATGCCTAGGTCG",4,57.37,6,-4.76,1.2,1.5,1.15,0.01,">1 nonsynonymous","Y93D S139A",2
"lib1","SARS-CoV-2","TTAGATGCTCCAAGGA",7,16.93,6.81,-3.96,0.57,1.5,1.15,0.06,">1 nonsynonymous","I28T T46S N64F N107H S113R",5
"lib1","SARS-CoV-2","TTAGATGCTGGCCATA",4,53.39,10.01,-0.75,0.09,1.89,1.09,0,">1 nonsynonymous","A89S E135L",2
"lib1","SARS-CoV-2","TTAGATGGAAAATGAT",2,26.15,9.25,-1.52,0.28,1.5,1,0.04,">1 nonsynonymous","L5W N64C N92L I142A",4
"lib1","SARS-CoV-2","TTAGATGTGCACGTCT",6,32.8,6.31,-4.45,0.59,1.5,1.17,0.03,">1 nonsynonymous","L5Y S45P G86N Y91T N120S F134P",6
"lib1","SARS-CoV-2","TTAGATGTTAATGAAT",2,33.64,10.72,-0.04,0.11,2.94,1.05,0,"1 nonsynonymous","T3Y",1
"lib1","SARS-CoV-2","TTAGATTAAACATAAG",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q T55G",2
"lib1","SARS-CoV-2","TTAGATTACCGAGACA",2,16.48,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","D59A P96L Y121C S139K",4
"lib1","SARS-CoV-2","TTAGATTCCTATTAAT",4,105.99,9.93,-0.84,0.07,2.31,1.08,0,">1 nonsynonymous","N4R D97N P133S G174W",4
"lib1","SARS-CoV-2","TTAGATTCGCTTATAA",1,47.06,10.8,0.03,0.09,2.85,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGATTCTCTTATAT",13,156.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T55C W106N N118V I138A",4
"lib1","SARS-CoV-2","TTAGATTCTTGAGACA",2,27.91,7.05,-3.71,0.55,1.5,1.11,0.07,">1 nonsynonymous","P82A V115H V180F",3
"lib1","SARS-CoV-2","TTAGATTGGTACATTG",2,24.99,10.69,-0.07,0.15,2.73,1,0.01,"1 nonsynonymous","E141Y",1
"lib1","SARS-CoV-2","TTAGATTGTAAACAAC",13,77.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68W N107C G116V",3
"lib1","SARS-CoV-2","TTAGATTGTTAACATG",4,11.88,6.48,-4.28,0.38,1.5,1.09,0.01,">1 nonsynonymous","C6I G83D A89Y P149Q",4
"lib1","SARS-CoV-2","TTAGATTTAAATCAAC",12,17.06,6.91,-3.86,0.51,1.5,1.11,0.05,">1 nonsynonymous","K56T V71E C150S L183R",4
"lib1","SARS-CoV-2","TTAGATTTTACCTAGG",2,8.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41R V180R",2
"lib1","SARS-CoV-2","TTAGATTTTCGTGACA",10,134.5,10.53,-0.23,0.07,2.8,1.11,0,">1 nonsynonymous","N40S L188Q",2
"lib1","SARS-CoV-2","TTAGCAAAAAGACTAA",6,59.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23K V103I C158V Q168L P191V",5
"lib1","SARS-CoV-2","TTAGCAAAATTTTCTA",1,80.36,10.4,-0.37,0.05,2.9,1.04,0,"1 nonsynonymous","A14M",1
"lib1","SARS-CoV-2","TTAGCAAAGCAGTGTC",1,8.06,6,-4.76,2,1.5,1.05,0.01,">1 nonsynonymous","I2C A89E D90S F99Y N107L",5
"lib1","SARS-CoV-2","TTAGCAACAATATGAA",2,46.83,10.05,-0.72,0.13,2.01,1.12,0.01,">1 nonsynonymous","I28N L122M P149V",3
"lib1","SARS-CoV-2","TTAGCAACCCCCAAAA",2,15.49,10.74,-0.03,0.07,2.97,1.01,0,">1 nonsynonymous","V37S N64Y L122S T148V L187I",5
"lib1","SARS-CoV-2","TTAGCAAGACTATGTG",1,34.97,8.47,-2.3,0.22,1.59,1.16,0.02,">1 nonsynonymous","D112H T201L",2
"lib1","SARS-CoV-2","TTAGCAATGAATAATG",4,6.03,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","Y21K A81N",2
"lib1","SARS-CoV-2","TTAGCAATTAACTGTA",4,20.8,10.57,-0.19,0.13,2.83,1.14,0.01,"1 nonsynonymous","S29D",1
"lib1","SARS-CoV-2","TTAGCACACACACCCC",9,63.99,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","S19L P82N",2
"lib1","SARS-CoV-2","TTAGCACATAATTATT",4,15.6,10.69,-0.07,0.09,2.97,1.05,0,">1 nonsynonymous","F44W D59S",2
"lib1","SARS-CoV-2","TTAGCACCCGTACACA",3,49.06,9.19,-1.57,0.24,1.53,1.17,0.02,">1 nonsynonymous","L5Y G83H A105H",3
"lib1","SARS-CoV-2","TTAGCACCGGAGTGTT",3,92.46,10.62,-0.15,0.08,2.91,1.04,0,">1 nonsynonymous","Y35M G83M",2
"lib1","SARS-CoV-2","TTAGCACGCTACGGAC",3,101.81,10.25,-0.51,0.04,2.88,1,0,">1 nonsynonymous","N4C S41P",2
"lib1","SARS-CoV-2","TTAGCACGTTGTAAAG",2,14.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33T N58K V103H G116I L125K G152F",6
"lib1","SARS-CoV-2","TTAGCACTCACTTAAC",2,72.09,8.39,-2.38,0.08,2.74,1.13,0,">1 nonsynonymous","N120R I142G",2
"lib1","SARS-CoV-2","TTAGCAGAGAGTGCGC",3,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17V A42D Y50H D90H P96L E135K V173I",7
"lib1","SARS-CoV-2","TTAGCAGAGTACGCAA",1,7.09,10.97,0.2,0.09,2.93,1,0,">1 nonsynonymous","L125M T201A",2
"lib1","SARS-CoV-2","TTAGCAGATAAAGCTA",4,48.62,10.19,-0.57,0.07,2.54,1,0,"1 nonsynonymous","P133I",1
"lib1","SARS-CoV-2","TTAGCAGATTCATAGG",2,41.18,10.86,0.09,0.08,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAGCAGTATCGCCCA",4,18.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23T N58M S200K",3
"lib1","SARS-CoV-2","TTAGCATAAGCTTCGA",4,34.44,10.11,-0.66,0.09,2.77,1.03,0,">1 nonsynonymous","E10L Y35F S53V N64P",4
"lib1","SARS-CoV-2","TTAGCATACACGACAG",2,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S G117P N130L G146F",4
"lib1","SARS-CoV-2","TTAGCATAGTTGCATT",1,3.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63V",1
"lib1","SARS-CoV-2","TTAGCATCAAGCAAGG",3,27.47,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N30K G51R F99R",3
"lib1","SARS-CoV-2","TTAGCATCACCCTATC",6,68.72,10.62,-0.14,0.04,2.92,1,0,">1 nonsynonymous","E10L V173Q",2
"lib1","SARS-CoV-2","TTAGCATGAGAGAGTA",9,75.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146Y F167V",2
"lib1","SARS-CoV-2","TTAGCATTACACGTTT",2,8.45,10.61,-0.16,0.09,3,1.01,0,"1 nonsynonymous","K114N",1
"lib1","SARS-CoV-2","TTAGCATTCAGAAAGC",5,25.36,6.81,-3.95,0.56,1.5,1.12,0.07,">1 nonsynonymous","F62L C102R",2
"lib1","SARS-CoV-2","TTAGCCAAAATCCCGG",1,10.62,NA,NA,NA,NA,NA,NA,"stop","P96* Y143L",2
"lib1","SARS-CoV-2","TTAGCCAAATCATGGA",2,73.19,9.8,-0.97,0.09,2.09,1.09,0,">1 nonsynonymous","K48S L111Q Y178L",3
"lib1","SARS-CoV-2","TTAGCCAATCAGGCGT",7,122.3,10.79,0.03,0.08,2.87,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCCACGTAATTGT",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E D112R N157D",3
"lib1","SARS-CoV-2","TTAGCCAGATCCACCA",2,26.07,7.75,-3.01,0.35,1.5,1.16,0.04,">1 nonsynonymous","Y91G D98M",2
"lib1","SARS-CoV-2","TTAGCCATCGAGAGAG",4,15.43,6,-4.76,2,1.5,1.08,0.03,">1 nonsynonymous","A89F D137P P149F E154T",4
"lib1","SARS-CoV-2","TTAGCCCACAATAGTT",4,36.79,10.03,-0.73,0.13,2.33,1.01,0.01,">1 nonsynonymous","Y91G L188M T201S",3
"lib1","SARS-CoV-2","TTAGCCCAGATAGACA",4,53.81,10.49,-0.27,0.08,2.88,1.12,0,">1 nonsynonymous","Y21H Y39I",2
"lib1","SARS-CoV-2","TTAGCCCAGGGTACCT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F T100G W106K G116E",4
"lib1","SARS-CoV-2","TTAGCCCCAATCCTGA",10,185.32,6.61,-4.15,0.4,1.5,1.22,0.02,">1 nonsynonymous","S19W S36L",2
"lib1","SARS-CoV-2","TTAGCCCCGACTACTT",3,66.94,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41F N151D G155L G172N",4
"lib1","SARS-CoV-2","TTAGCCCGAGCATGCG",4,71.77,8.11,-2.65,0.22,1.69,1.12,0.02,"1 nonsynonymous","D112A",1
"lib1","SARS-CoV-2","TTAGCCCTTAAAGGAG",1,20.91,10.67,-0.09,0.12,2.93,1.04,0.01,">1 nonsynonymous","T63A L122Y",2
"lib1","SARS-CoV-2","TTAGCCGAAAAAACAT",4,89.54,10.59,-0.18,0.14,2.83,1.09,0.01,"1 nonsynonymous","L122A",1
"lib1","SARS-CoV-2","TTAGCCGAAAATGACA",4,78.56,10.72,-0.05,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCCGAGAACTGAA",6,75.46,8.44,-2.32,0.24,1.51,1.16,0.02,">1 nonsynonymous","S113P I142V",2
"lib1","SARS-CoV-2","TTAGCCGAGAATCCAA",1,9.18,8.67,-2.1,0.05,2.71,1.07,0,">1 nonsynonymous","F12L F44Y Q168L",3
"lib1","SARS-CoV-2","TTAGCCGAGTTGTAAC",4,105.06,10.82,0.06,0.08,2.84,1.07,0,">1 nonsynonymous","T3R K198G",2
"lib1","SARS-CoV-2","TTAGCCGATATATCCA",4,136.83,10.01,-0.76,0.09,2.07,1.05,0,">1 nonsynonymous","W23P G83K L122Q T140R",4
"lib1","SARS-CoV-2","TTAGCCGCCGCATTCT",6,66.87,10.74,-0.03,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TTAGCCGGCAACCTTA",1,52.44,10.39,-0.37,0.06,2.92,1.03,0,"1 nonsynonymous","G174K",1
"lib1","SARS-CoV-2","TTAGCCTACATCTTAA",1,4.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25M",1
"lib1","SARS-CoV-2","TTAGCCTAGCCAGTAT",1,45.86,10.72,-0.04,0.08,2.91,1.07,0,"1 nonsynonymous","C61S",1
"lib1","SARS-CoV-2","TTAGCCTTGAACTTAG",2,40.38,10.08,-0.68,0.06,2.92,1.01,0,">1 nonsynonymous","C6D G83R",2
"lib1","SARS-CoV-2","TTAGCGACGAGGCCAT",10,59.02,6,-4.76,2,1.5,1.27,0.02,">1 nonsynonymous","P82T P177Q",2
"lib1","SARS-CoV-2","TTAGCGATATTCACCC",1,15.61,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","I28R P96L G146E",3
"lib1","SARS-CoV-2","TTAGCGATCACCTATT",9,72.86,6,-4.76,1.31,1.5,1.23,0.03,">1 nonsynonymous","F12A G116E F134I C158K K199I",5
"lib1","SARS-CoV-2","TTAGCGATCAGCTGCA",1,46.23,10.79,0.02,0.06,2.95,1,0,"1 nonsynonymous","S36K",1
"lib1","SARS-CoV-2","TTAGCGATCCAAAAAC",2,18.55,10.02,-0.75,0.1,2.9,1.04,0,"1 nonsynonymous","G155I",1
"lib1","SARS-CoV-2","TTAGCGCACACCGGAC",4,0.46,NA,NA,NA,NA,NA,NA,"stop","L57Q V77W K87E V103W D112F Y121* L125R P133D",8
"lib1","SARS-CoV-2","TTAGCGCCATTATGTA",11,1.9,NA,NA,NA,NA,NA,NA,"stop","I80F S129W C195* T201S",4
"lib1","SARS-CoV-2","TTAGCGCCTGTATACC",2,30.03,6,-4.76,2,3,1.18,0,">1 nonsynonymous","L38N Y119F F134M E141S",4
"lib1","SARS-CoV-2","TTAGCGCTAAGAAATA",2,38.7,6,-4.76,2,3,1.22,0,">1 nonsynonymous","F8I R27L G86L E135T G146R T201P",6
"lib1","SARS-CoV-2","TTAGCGCTCGTAGTTA",5,26.7,9.85,-0.92,0.17,1.85,1.05,0.01,">1 nonsynonymous","I2H W23S A42H A190P",4
"lib1","SARS-CoV-2","TTAGCGCTTCTAAAAA",1,10.45,10.8,0.03,0.07,2.94,1,0,"1 nonsynonymous","V20P",1
"lib1","SARS-CoV-2","TTAGCGCTTTCCATCC",10,0.24,NA,NA,NA,NA,NA,NA,"stop","V11C F99T I104G N151I F185* T201P",6
"lib1","SARS-CoV-2","TTAGCGGAAACGTGCT",10,247.46,10.58,-0.18,0.03,2.85,1.05,0,">1 nonsynonymous","A33T A42R",2
"lib1","SARS-CoV-2","TTAGCGGCTACACAAG",2,7.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84W A105R L162N",3
"lib1","SARS-CoV-2","TTAGCGGGAATCACCA",12,64.07,9.8,-0.97,0.11,2,1.09,0,">1 nonsynonymous","F44V T55K R136T T201Y",4
"lib1","SARS-CoV-2","TTAGCGGTGCTAAGAC",3,19.12,6.18,-4.58,0.42,1.5,1.09,0.01,">1 nonsynonymous","V103G S139V L162P L188N",4
"lib1","SARS-CoV-2","TTAGCGTAAAAATATG",1,15.72,10.04,-0.73,0.14,2.49,1.03,0.01,"1 nonsynonymous","C102M",1
"lib1","SARS-CoV-2","TTAGCGTAATCTTAAT",1,24.78,10.19,-0.57,0.08,2.85,1,0,">1 nonsynonymous","G9K N58R I138R",3
"lib1","SARS-CoV-2","TTAGCGTACCACCCAG",1,40.96,10.67,-0.09,0.09,2.89,1.06,0,"1 nonsynonymous","Y143F",1
"lib1","SARS-CoV-2","TTAGCGTATCCGCTAG",1,2.3,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib1","SARS-CoV-2","TTAGCGTATTTAAATA",5,7.36,NA,NA,NA,NA,NA,NA,"stop","L5G A14P T85* G101P I142W G152L T170* P177S",8
"lib1","SARS-CoV-2","TTAGCGTGGCGGCCAA",8,106.87,10.52,-0.24,0.03,2.9,1.04,0,">1 nonsynonymous","K26E P149S T201P",3
"lib1","SARS-CoV-2","TTAGCTAAAGAAGGTT",2,14.86,9.87,-0.9,0.27,1.67,1.09,0.02,">1 nonsynonymous","C49H Y178H",2
"lib1","SARS-CoV-2","TTAGCTAACGGTGAAC",7,2.41,NA,NA,NA,NA,NA,NA,"stop","G86* R124C F156P",3
"lib1","SARS-CoV-2","TTAGCTAAGATAGAAT",10,1.21,NA,NA,NA,NA,NA,NA,"stop","Q84R I104*",2
"lib1","SARS-CoV-2","TTAGCTAAGATTACGG",5,24.51,8.51,-2.26,0.28,1.5,1.11,0.04,">1 nonsynonymous","K87Y V180S",2
"lib1","SARS-CoV-2","TTAGCTACCTTGCAAC",2,76.37,10.78,0.02,0.07,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCTACGTTCAAAT",3,25.56,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14D V32A S69R G146R P177S",5
"lib1","SARS-CoV-2","TTAGCTACTGTGATCA",4,88.25,10.24,-0.52,0.08,2.71,1.01,0,">1 nonsynonymous","F99Y P149A",2
"lib1","SARS-CoV-2","TTAGCTACTTTACTCT",3,101.41,9.84,-0.92,0.29,1.5,1,0.04,"1 nonsynonymous","F167G",1
"lib1","SARS-CoV-2","TTAGCTAGAGACTAAG",13,137.04,10.77,0.01,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCTAGATCCAATA",12,2.51,NA,NA,NA,NA,NA,NA,"stop","T3S A14E Q168*",3
"lib1","SARS-CoV-2","TTAGCTAGCATACGTA",5,20.93,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G51C V77T G116N C150R Q163C",5
"lib1","SARS-CoV-2","TTAGCTAGCGAGGGAA",8,66.8,7.59,-3.18,0.38,1.5,1.2,0.05,">1 nonsynonymous","G9V A42T N107K N118S F160R",5
"lib1","SARS-CoV-2","TTAGCTATAATGCAGG",2,7481.62,10.68,-0.08,0.03,2.95,1.02,0,">1 nonsynonymous","N110Y V153M",2
"lib1","SARS-CoV-2","TTAGCTATTCTATGAC",2,40.66,6.13,-4.64,0.54,1.5,1.1,0.01,">1 nonsynonymous","N1G F134S N171K",3
"lib1","SARS-CoV-2","TTAGCTCACACACGTC",3,37.18,10.79,0.03,0.05,2.91,1.06,0,">1 nonsynonymous","R16I N130D H189S",3
"lib1","SARS-CoV-2","TTAGCTCCTGATCACG",1,36.11,10.07,-0.69,0.08,2.24,1.01,0,"1 nonsynonymous","R25Q",1
"lib1","SARS-CoV-2","TTAGCTCGGATCTTGA",1,17.17,10.89,0.12,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCTCTAATAGAAA",4,93.04,10.64,-0.13,0.05,2.92,1.04,0,"1 nonsynonymous","S36F",1
"lib1","SARS-CoV-2","TTAGCTCTCTGCGTTT",1,46.64,9.56,-1.21,0.17,1.74,1.13,0.01,">1 nonsynonymous","A22V N30S S184F",3
"lib1","SARS-CoV-2","TTAGCTGACAAATAGA",3,92.64,9.32,-1.45,0.35,1.5,1,0.06,">1 nonsynonymous","K48N D68L P96S Q144S",4
"lib1","SARS-CoV-2","TTAGCTGACTTGTCCG",2,52.22,9.36,-1.4,0.14,1.82,1.14,0.01,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TTAGCTGCACATGTTT",2,17.27,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","Y93F W106V G117R S164M",4
"lib1","SARS-CoV-2","TTAGCTGTCCGATGCC",6,86.62,10.73,-0.03,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCTTAACAATCCG",2,5.92,10.88,0.12,0.09,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGCTTACATCAACT",3,50.67,8.23,-2.54,0.39,1.5,1.11,0.07,">1 nonsynonymous","C6S S45P L60P L122N F156H",5
"lib1","SARS-CoV-2","TTAGCTTCGCAGATCG",1,40.23,10.32,-0.44,0.07,2.81,1.06,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TTAGCTTTACATTACT",13,234.63,8.59,-2.17,0.09,2.85,1.07,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","TTAGGAAAAGAGTTAT",2,1.06,NA,NA,NA,NA,NA,NA,"stop","N4C Q163*",2
"lib1","SARS-CoV-2","TTAGGAAACTTTCAGG",2,25.47,10.06,-0.71,0.09,2.63,1.03,0,">1 nonsynonymous","A42D V77L R136W",3
"lib1","SARS-CoV-2","TTAGGAAAGAAATATA",2,44.03,10.81,0.04,0.09,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGGAAAGGACACAT",4,23.97,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50M D98Y V103Y F126S P149Y E154V",6
"lib1","SARS-CoV-2","TTAGGAAATAGCAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15D T63G K87* E154A",4
"lib1","SARS-CoV-2","TTAGGAACTAGTTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N40H P96S T170*",3
"lib1","SARS-CoV-2","TTAGGAAGAAAGCGAG",2,24.79,9.89,-0.88,0.11,2.19,1.05,0.01,">1 nonsynonymous","S41V D98Y K128L T201V",4
"lib1","SARS-CoV-2","TTAGGAAGCTCACGTA",1,15.59,6,-4.76,1.06,1.5,1.05,0.01,">1 nonsynonymous","F8V P96T C150E K198C",4
"lib1","SARS-CoV-2","TTAGGAAGTACTATTG",3,16.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49G R136H Q144I",3
"lib1","SARS-CoV-2","TTAGGAATGAAAATGT",4,17.37,6.64,-4.13,0.54,1.5,1.1,0.03,">1 nonsynonymous","S19L S43Y T140L S184G",4
"lib1","SARS-CoV-2","TTAGGAATTCTAGAAT",2,1.03,NA,NA,NA,NA,NA,NA,"stop","P7V A42E T55L A105L G172*",5
"lib1","SARS-CoV-2","TTAGGACAAGATCAAT",3,160.38,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14K T100F F167R Q176R",4
"lib1","SARS-CoV-2","TTAGGACATGACCACA",11,84.32,10.77,0.01,0.06,2.93,1.06,0,">1 nonsynonymous","T100C F134G",2
"lib1","SARS-CoV-2","TTAGGACCTAAAACCA",5,109.01,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G116E T170L P177D C195S",4
"lib1","SARS-CoV-2","TTAGGACGTTCACGCA",10,56.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V20Q A33R",2
"lib1","SARS-CoV-2","TTAGGACTCAAACCTA",3,85.26,9.16,-1.61,0.07,2.73,1.11,0,">1 nonsynonymous","L125P P169L",2
"lib1","SARS-CoV-2","TTAGGACTGAAAAGAG",1,8.44,7.83,-2.94,0.21,1.5,1.01,0.02,">1 nonsynonymous","T46N F99V",2
"lib1","SARS-CoV-2","TTAGGAGACTCTCTAG",1,27.9,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","L38D C49Y T140L T170N",4
"lib1","SARS-CoV-2","TTAGGAGCAACGGTAA",6,31.46,6.02,-4.74,1.39,1.5,1.16,0.03,">1 nonsynonymous","I2G S43G F99N",3
"lib1","SARS-CoV-2","TTAGGAGCAGTCTTAG",5,100.62,10.32,-0.45,0.12,2.78,1.2,0,">1 nonsynonymous","K128I Q144A",2
"lib1","SARS-CoV-2","TTAGGATAGCTTACGA",1,72.95,6,-4.76,2,3,1.17,0,">1 nonsynonymous","Y91S S139V F160R Q176L",4
"lib1","SARS-CoV-2","TTAGGATAGTGCACGC",8,71.15,6.04,-4.72,1.32,1.5,1.27,0.04,">1 nonsynonymous","S45M F62S L95D",3
"lib1","SARS-CoV-2","TTAGGCAAAAAAGTGA",5,104.47,10.58,-0.19,0.04,2.9,1.06,0,"1 nonsynonymous","N110W",1
"lib1","SARS-CoV-2","TTAGGCACAAAGAGAC",1,0.55,NA,NA,NA,NA,NA,NA,"stop","S19G A33N V77*",3
"lib1","SARS-CoV-2","TTAGGCACAGATATTA",2,8.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1Q V20E K128Y",3
"lib1","SARS-CoV-2","TTAGGCAGAGAGAGCC",1,26.42,10.82,0.05,0.06,3,1,0,"1 nonsynonymous","T148S",1
"lib1","SARS-CoV-2","TTAGGCATGAAAGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","N30W D59Y E76* L95I",4
"lib1","SARS-CoV-2","TTAGGCCAGCTGACAT",8,196.78,8.71,-2.06,0.08,2.68,1.08,0,">1 nonsynonymous","P7H N118P",2
"lib1","SARS-CoV-2","TTAGGCCATGCCCAAA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I F44H K94M Y143G",4
"lib1","SARS-CoV-2","TTAGGCGTAAATTGAA",7,1.35,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib1","SARS-CoV-2","TTAGGCTCAGTAATCA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib1","SARS-CoV-2","TTAGGCTCCATAATAC",5,115.36,10.14,-0.62,0.07,2.6,1.01,0,"1 nonsynonymous","K94M",1
"lib1","SARS-CoV-2","TTAGGCTCCCATAAAG",1,30.84,6.04,-4.72,0.89,1.5,1.09,0.02,">1 nonsynonymous","A14M T85Q W106L G172R",4
"lib1","SARS-CoV-2","TTAGGCTCTATAACTG",1,35.65,9.64,-1.12,0.13,2.6,1.03,0.01,">1 nonsynonymous","T63W N107P",2
"lib1","SARS-CoV-2","TTAGGCTGTCAATTCT",1,43.7,7.92,-2.85,0.3,1.5,1.06,0.03,">1 nonsynonymous","N24R Y91H Y123H P149L",4
"lib1","SARS-CoV-2","TTAGGCTTAGCAATAC",6,14.9,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3K D98N V103E",3
"lib1","SARS-CoV-2","TTAGGCTTTTAAAGAA",2,29.16,10.88,0.11,0.08,2.94,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGGGAAATAGACTA",5,32.07,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","F70I G83V",2
"lib1","SARS-CoV-2","TTAGGGAACACACTAA",3,126.14,10.25,-0.52,0.05,2.94,1.01,0,">1 nonsynonymous","K87G P197G",2
"lib1","SARS-CoV-2","TTAGGGAAGCATTAGC",6,67.99,10.62,-0.15,0.07,2.86,1.07,0,">1 nonsynonymous","L60F R136K T201V",3
"lib1","SARS-CoV-2","TTAGGGAATGTGGATC",4,35.15,8.73,-2.03,0.21,1.96,1.16,0.02,">1 nonsynonymous","T85R K114P P133E T201R",4
"lib1","SARS-CoV-2","TTAGGGACCAGAGATA",1,27.42,10.75,-0.02,0.1,2.88,1.08,0,">1 nonsynonymous","E141M K199W",2
"lib1","SARS-CoV-2","TTAGGGAGTCCACAAT",1,23.88,6.87,-3.9,0.07,2.92,1.05,0,"1 nonsynonymous","C158H",1
"lib1","SARS-CoV-2","TTAGGGAGTGAATAAA",9,74.3,10.76,-0.01,0.07,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGGGCAGGCGCAGA",10,136.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S29M K48F I104F L131R S147I",5
"lib1","SARS-CoV-2","TTAGGGCATGGAAAAT",4,88.41,10.69,-0.07,0.04,2.96,1.02,0,">1 nonsynonymous","R16D L60I",2
"lib1","SARS-CoV-2","TTAGGGCCTCGCCCAG",1,33.29,9.42,-1.34,0.15,1.83,1.09,0.01,">1 nonsynonymous","L5H L57W F62H D90S",4
"lib1","SARS-CoV-2","TTAGGGCCTGATGGGC",1,6.92,10.3,-0.46,0.15,2.86,1.02,0.01,">1 nonsynonymous","N4F N40D",2
"lib1","SARS-CoV-2","TTAGGGCGCCCCTGAA",4,83.43,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","F12S Y39K F44V A89W T100L R136K Y159Q",7
"lib1","SARS-CoV-2","TTAGGGCTAGGTACAC",1,0.36,NA,NA,NA,NA,NA,NA,"stop","T55C G146N Q168*",3
"lib1","SARS-CoV-2","TTAGGGGCAAAATAAA",1,15.09,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L38F Y50N N64V F99R R127P",5
"lib1","SARS-CoV-2","TTAGGGGTCAGGAACT",1,11.26,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","W23T S139L G146E Y175S C195F",5
"lib1","SARS-CoV-2","TTAGGGGTCCACATGA",5,72.15,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A18P Y39L Y91P K128H Q168T",5
"lib1","SARS-CoV-2","TTAGGGTAGTAACCTT",8,123.56,6,-4.76,1.37,1.5,1.18,0.01,">1 nonsynonymous","G116H R124S S139K",3
"lib1","SARS-CoV-2","TTAGGGTTTAAACTCA",8,34.27,10.76,0,0.05,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGGTAATTACTACT",3,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R A105N",2
"lib1","SARS-CoV-2","TTAGGTAATTTTGATG",1,8.96,6.43,-4.33,2,3,1.09,0.02,">1 nonsynonymous","V11D S19A L95N G101I F167N",5
"lib1","SARS-CoV-2","TTAGGTAGATCAAATA",5,46.82,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A14W P82L G101C W106R",4
"lib1","SARS-CoV-2","TTAGGTAGATCGTTAC",4,70.32,6,-4.76,0.58,1.5,1.1,0,">1 nonsynonymous","F12I C158L Q176A",3
"lib1","SARS-CoV-2","TTAGGTATCCGGTTCC",8,62.66,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T85M P96R Y143S F160R",4
"lib1","SARS-CoV-2","TTAGGTCATGCCACGC",5,103.63,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","A22V N40E F62S S139M",4
"lib1","SARS-CoV-2","TTAGGTCATGGACTAA",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I A14I V77K C158V",4
"lib1","SARS-CoV-2","TTAGGTCTACCGCATT",3,0,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib1","SARS-CoV-2","TTAGGTCTAGGACCAA",6,134.7,8.36,-2.4,0.18,2.16,1.13,0.01,">1 nonsynonymous","I2S G146L",2
"lib1","SARS-CoV-2","TTAGGTGCCACTTACT",3,48.28,6,-4.76,2,3,1.14,0,">1 nonsynonymous","R16E A22P V77G Q84K",4
"lib1","SARS-CoV-2","TTAGGTGTGTAAGGGC",4,47.5,10.76,-0.01,0.05,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGGTTACAGTAGCG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","F12K K56* K87T E141Y N157G T170N Y175I",7
"lib1","SARS-CoV-2","TTAGGTTGTTCATACA",1,57.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G83V N157F S184A",3
"lib1","SARS-CoV-2","TTAGGTTTACGTAGAG",3,9.21,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K48C K94W Y119I R127L",4
"lib1","SARS-CoV-2","TTAGGTTTGTCACAAG",8,9.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V173N L183E S200T",3
"lib1","SARS-CoV-2","TTAGTAAAAGCTGACT",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M G117L T140S P169L S184H",5
"lib1","SARS-CoV-2","TTAGTAAAATTTACAC",1,29.95,10.61,-0.15,0.17,2.68,1.29,0.01,">1 nonsynonymous","V37S T63S E141M",3
"lib1","SARS-CoV-2","TTAGTAAACAACGTCT",1,44.97,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","T63N L95R N107R Q168W",4
"lib1","SARS-CoV-2","TTAGTAAACTAGTGAC",2,50.82,9.96,-0.8,0.07,2.73,1.04,0,">1 nonsynonymous","L5M A81T F156W",3
"lib1","SARS-CoV-2","TTAGTAAATTTTTACC",8,5.52,NA,NA,NA,NA,NA,NA,"stop","S29* A89N I104F T140S",4
"lib1","SARS-CoV-2","TTAGTAACAAAAGAAC",5,60.46,8.6,-2.16,0.17,1.64,1.18,0.01,">1 nonsynonymous","T15K S36V G83V S147P F156S",5
"lib1","SARS-CoV-2","TTAGTAACAATTTATG",4,28.12,6.98,-3.78,0.46,1.5,1.1,0.04,">1 nonsynonymous","N157F T170G",2
"lib1","SARS-CoV-2","TTAGTAACAGGATCCT",2,19.05,6,-4.76,2,3,1.13,0,">1 nonsynonymous","G9P S45R G51Q Q84M F99V",5
"lib1","SARS-CoV-2","TTAGTAACATTATCGT",11,88.75,6,-4.76,2,1.5,1.26,0.01,">1 nonsynonymous","V11M P96C G152V Q163T",4
"lib1","SARS-CoV-2","TTAGTAACTACCAGTC",6,5.56,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","W106N",1
"lib1","SARS-CoV-2","TTAGTAACTCGCACGG",6,31.44,6.48,-4.29,0.92,1.5,1.23,0.08,">1 nonsynonymous","R25Y T85S Y93F P96T N118V E141M",6
"lib1","SARS-CoV-2","TTAGTAATAAATTTAA",1,18.72,10.37,-0.39,0.14,2.78,1,0.01,">1 nonsynonymous","Y35T N64P",2
"lib1","SARS-CoV-2","TTAGTAATGTAGCTAT",10,103.38,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","Y35R C49N K56Q T148I Q168L K198A",6
"lib1","SARS-CoV-2","TTAGTAATTTGCATCA",1,1.54,NA,NA,NA,NA,NA,NA,"stop","I2K V37* Y50P N130C",4
"lib1","SARS-CoV-2","TTAGTACAGATTTGGT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib1","SARS-CoV-2","TTAGTACATCCGCATA",2,25.96,6,-4.76,2,3,1.1,0,">1 nonsynonymous","C49D K114M N157G",3
"lib1","SARS-CoV-2","TTAGTACCAGAGCCAA",1,92.26,10.77,0,0.07,2.91,1.06,0,"1 nonsynonymous","D98S",1
"lib1","SARS-CoV-2","TTAGTACCATTTGGTG",6,92.94,8.55,-2.22,0.2,1.5,1.06,0.02,">1 nonsynonymous","V77E N130D",2
"lib1","SARS-CoV-2","TTAGTACCCACGAGAC",4,13.82,7.49,-3.28,0.32,1.5,1.09,0.03,">1 nonsynonymous","R16S P54H A81F V115C L122F R127L T201D",7
"lib1","SARS-CoV-2","TTAGTACCCAGTTATA",4,28.45,6.61,-4.15,0.72,1.5,1.18,0.07,">1 nonsynonymous","K94W Q163N",2
"lib1","SARS-CoV-2","TTAGTACCCTGACGAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","I2W F12* P54A R73K S139I",5
"lib1","SARS-CoV-2","TTAGTACGGACAAATA",3,24.74,7.73,-3.03,0.18,1.51,1.05,0.01,">1 nonsynonymous","F8E Y119F",2
"lib1","SARS-CoV-2","TTAGTACTAAGCAGCG",7,1.51,NA,NA,NA,NA,NA,NA,"stop","A14M G86T N110* G174P",4
"lib1","SARS-CoV-2","TTAGTACTCCTAACGG",6,20.54,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","V11Q P96I K128M",3
"lib1","SARS-CoV-2","TTAGTACTTACACTAT",2,6.29,10.52,-0.24,0.98,2.91,1.08,0,">1 nonsynonymous","R27L D90R K132T",3
"lib1","SARS-CoV-2","TTAGTAGACCGAGTTC",6,86.78,10.47,-0.3,0.07,2.85,1.04,0,">1 nonsynonymous","R16T T85F T148M N171I",4
"lib1","SARS-CoV-2","TTAGTAGCACTCAAGC",6,199.98,10.28,-0.48,0.08,2.86,1,0,">1 nonsynonymous","N1M T55L T63Y V173H",4
"lib1","SARS-CoV-2","TTAGTAGCGAATAACT",1,45.08,10.64,-0.12,0.06,2.92,1.03,0,">1 nonsynonymous","A42V V153Y",2
"lib1","SARS-CoV-2","TTAGTAGCGCAAGTAA",1,12.66,9.26,-1.51,0.11,2.78,1.22,0.01,">1 nonsynonymous","N4Q F156E",2
"lib1","SARS-CoV-2","TTAGTAGTAACTCTCC",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A Y50T P96I",3
"lib1","SARS-CoV-2","TTAGTATAATTAAATC",8,108.62,10.7,-0.07,0.04,2.96,1.01,0,"1 nonsynonymous","A33C",1
"lib1","SARS-CoV-2","TTAGTATACCATTTAC",1,42.82,10.24,-0.53,0.13,2.59,1.04,0.01,">1 nonsynonymous","Y91R N110S",2
"lib1","SARS-CoV-2","TTAGTATATAACTGTA",1,50.68,10,-0.77,0.07,2.84,1.04,0,">1 nonsynonymous","F8L V32S Q168T",3
"lib1","SARS-CoV-2","TTAGTATATTTAATGT",2,84.9,9.91,-0.85,0.07,2.52,1.03,0,"1 nonsynonymous","V20S",1
"lib1","SARS-CoV-2","TTAGTATCACAGCATT",1,19.02,10.75,-0.02,0.11,2.85,1.1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTATGTTCTTAGT",3,25.33,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","G51F I88P",2
"lib1","SARS-CoV-2","TTAGTATTCCAAGCAC",7,3.79,NA,NA,NA,NA,NA,NA,"stop","C49L T100H N118A R127M I138* F156L",6
"lib1","SARS-CoV-2","TTAGTCAAACATTTGG",8,92.8,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T55C K87L F126D",3
"lib1","SARS-CoV-2","TTAGTCAACATTCTCC",3,30.64,8.69,-2.07,0.15,1.67,1.17,0.01,">1 nonsynonymous","A67S Y123A G152H P197A",4
"lib1","SARS-CoV-2","TTAGTCAATCTGTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","T46A P133* C150F",3
"lib1","SARS-CoV-2","TTAGTCACAGCATCTT",9,107.08,7.54,-3.22,0.16,1.5,1.14,0.01,">1 nonsynonymous","Y91R N120P",2
"lib1","SARS-CoV-2","TTAGTCACATATCTTA",1,35.43,10.83,0.07,0.07,2.96,1.01,0,">1 nonsynonymous","Y39Q K48E S164H",3
"lib1","SARS-CoV-2","TTAGTCATGGGTAGAG",1,18.54,9.92,-0.84,0.13,2.66,1,0.01,">1 nonsynonymous","F44S F134N",2
"lib1","SARS-CoV-2","TTAGTCATTTACTTTC",5,76.51,10.78,0.02,0.08,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTCCAGATTGAGC",14,0.66,NA,NA,NA,NA,NA,NA,"stop","C61* F126C N151H F167S",4
"lib1","SARS-CoV-2","TTAGTCCATACAACTA",3,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77K G146R",2
"lib1","SARS-CoV-2","TTAGTCCGGCATTGCA",5,0.56,NA,NA,NA,NA,NA,NA,"stop","A18* S29I D59R",3
"lib1","SARS-CoV-2","TTAGTCCTTAGGAACC",1,58.2,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9I N64V L122C Y175G",4
"lib1","SARS-CoV-2","TTAGTCCTTCGGAATT",1,16.83,6,-4.76,2,1.5,1.12,0.06,">1 nonsynonymous","S45C V52P N107V R124H L131R",5
"lib1","SARS-CoV-2","TTAGTCCTTGTAGCTT",4,228.93,10.74,-0.02,0.08,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTCGAGATTATCT",2,61.23,9.99,-0.77,0.16,1.88,1.05,0.01,"1 nonsynonymous","I88C",1
"lib1","SARS-CoV-2","TTAGTCTACAAAAGGT",1,16.74,6,-4.76,1.45,3,1.14,0,">1 nonsynonymous","Y39Q L57V W106K Q176R S184I",5
"lib1","SARS-CoV-2","TTAGTCTAGAATGTAT",6,62.3,10.69,-0.08,0.08,2.91,1.04,0,">1 nonsynonymous","I28L C61R",2
"lib1","SARS-CoV-2","TTAGTCTATCTTATAT",3,43.27,10.75,-0.02,0.05,2.91,1.04,0,"1 nonsynonymous","S184H",1
"lib1","SARS-CoV-2","TTAGTCTCCCAAGTAT",6,183.91,10.75,-0.01,0.06,2.89,1.08,0,">1 nonsynonymous","S43L L187T",2
"lib1","SARS-CoV-2","TTAGTCTGGGTAGATT",3,24.79,10.72,-0.04,0.09,2.89,1,0.01,">1 nonsynonymous","L5G P149L",2
"lib1","SARS-CoV-2","TTAGTCTTTACGCCTA",2,24.64,9.55,-1.22,0.09,1.78,1.06,0,">1 nonsynonymous","W23S K128G",2
"lib1","SARS-CoV-2","TTAGTCTTTCCTATAC",4,0.86,NA,NA,NA,NA,NA,NA,"stop","A18* S45V P96W T100V",4
"lib1","SARS-CoV-2","TTAGTGAAAGGCTAGG",1,4.41,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTGAATACAGAAG",14,135.46,10.8,0.04,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTGAATGAGGCAA",5,1.19,NA,NA,NA,NA,NA,NA,"stop","F8T T63L A89K D112* E154P R179C",6
"lib1","SARS-CoV-2","TTAGTGACAAAATCCG",1,7.79,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P7E Y66N L95T",3
"lib1","SARS-CoV-2","TTAGTGACGTGTATGC",3,70.38,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y35R R127S P177A",3
"lib1","SARS-CoV-2","TTAGTGACTATGCAGG",2,53.37,9.69,-1.07,0.11,2.16,1.05,0,">1 nonsynonymous","C6F S45K",2
"lib1","SARS-CoV-2","TTAGTGAGAAAAATAT",3,3.12,NA,NA,NA,NA,NA,NA,"stop","R73M W106S N120* G146L V180S",5
"lib1","SARS-CoV-2","TTAGTGATCAATCGCC",7,56.16,10.94,0.18,0.08,2.9,1.02,0,">1 nonsynonymous","S36E F160A K198R",3
"lib1","SARS-CoV-2","TTAGTGCTAAGAATGG",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I N130F",2
"lib1","SARS-CoV-2","TTAGTGCTAGTCATGT",1,9.86,10.78,0.01,0.08,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTGCTCATTGCAA",7,143.22,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","S19K Y175S",2
"lib1","SARS-CoV-2","TTAGTGGAATTAATAA",2,8.68,8.42,-2.34,0.25,2.81,1,0.01,">1 nonsynonymous","C6T K87I Y119L",3
"lib1","SARS-CoV-2","TTAGTGGACGCAATAG",2,18.79,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","F8A D98I N107Q",3
"lib1","SARS-CoV-2","TTAGTGTCATAATGTT",7,35.01,10.21,-0.56,0.06,2.84,1.03,0,">1 nonsynonymous","T3S Y91M S129V",3
"lib1","SARS-CoV-2","TTAGTGTTCCAGACAT",4,62.51,8.91,-1.86,0.23,1.51,1.12,0.03,">1 nonsynonymous","I2F V11F K48V D90Y",4
"lib1","SARS-CoV-2","TTAGTGTTGGAAACAC",1,22.56,10.81,0.05,0.08,2.87,1.09,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TTAGTTAAAGCACTCC",6,72.82,9.52,-1.25,0.17,1.76,1.13,0.01,">1 nonsynonymous","T55D P82V S184R",3
"lib1","SARS-CoV-2","TTAGTTAAATATTAAA",2,43.44,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","P82M K94R V173A R179S",4
"lib1","SARS-CoV-2","TTAGTTACATGAACGA",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P S129D",2
"lib1","SARS-CoV-2","TTAGTTACATGCTGGC",2,0.41,NA,NA,NA,NA,NA,NA,"stop","F8* F99I N120W",3
"lib1","SARS-CoV-2","TTAGTTACCGCTTCAG",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A Q84G Y93R I104T S164C",5
"lib1","SARS-CoV-2","TTAGTTAGCACACAGT",5,0.4,NA,NA,NA,NA,NA,NA,"stop","L5T V11* C49H",3
"lib1","SARS-CoV-2","TTAGTTAGCACACGAG",4,26.33,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","I80W V115L G155L G174L",4
"lib1","SARS-CoV-2","TTAGTTATATAGTTTG",4,20.22,10.98,0.21,0.11,2.95,1,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTAGTTCACCGTTACA",2,5.2,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","S139C C158I",2
"lib1","SARS-CoV-2","TTAGTTCAGAATCCTA",6,33.02,6.73,-4.04,0.82,1.5,1.1,0.08,">1 nonsynonymous","C102P E186Y",2
"lib1","SARS-CoV-2","TTAGTTCCGAAACGCA",2,13.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22V C49Q R127V",3
"lib1","SARS-CoV-2","TTAGTTCCGTCCGATA",2,19.78,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","Y35T C150Y L162S",3
"lib1","SARS-CoV-2","TTAGTTCGTACCAGAA",6,88.17,9.43,-1.33,0.17,1.57,1.11,0.01,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","TTAGTTCTAAAACCGC",2,8.96,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","P82R V103N F160Y R179W S184D",5
"lib1","SARS-CoV-2","TTAGTTCTTTCTGGAA",4,46.61,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68G G83R N130A V182M T201S",5
"lib1","SARS-CoV-2","TTAGTTGCAGACAGAT",2,1.97,NA,NA,NA,NA,NA,NA,"stop","L5* A14E I28D K199Y",4
"lib1","SARS-CoV-2","TTAGTTGCATACTCGC",3,22.46,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V11N S45L L57P N64L K128T",5
"lib1","SARS-CoV-2","TTAGTTGGAAACTGTG",4,0.98,NA,NA,NA,NA,NA,NA,"stop","A33S Y91D V173*",3
"lib1","SARS-CoV-2","TTAGTTTAATACGATA",4,57.79,10.34,-0.43,0.04,2.93,1.02,0,">1 nonsynonymous","R27A N40K T55P",3
"lib1","SARS-CoV-2","TTAGTTTAGTGCACGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155S",1
"lib1","SARS-CoV-2","TTAGTTTCTCTGAGAA",2,12.28,7.73,-3.04,0.31,1.87,1.19,0.07,">1 nonsynonymous","G86R P133Q Y159R L183N T201Q",5
"lib1","SARS-CoV-2","TTAGTTTTACATGTAA",1,56.25,10.16,-0.61,0.15,2.33,1.02,0.01,">1 nonsynonymous","L5T T100G A190S",3
"lib1","SARS-CoV-2","TTAGTTTTTACCCACT",8,49.81,10.08,-0.69,0.07,2.7,1.03,0,"1 nonsynonymous","P161E",1
"lib1","SARS-CoV-2","TTATAAAAAAATATTT",9,39.1,10.84,0.08,0.05,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATAAAAAAGAATTG",1,7.03,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","T3A W23Q F99S D112A T140M",5
"lib1","SARS-CoV-2","TTATAAAAACATGAAA",2,84.08,10.09,-0.67,0.08,2.84,1.05,0,">1 nonsynonymous","I104M G174E",2
"lib1","SARS-CoV-2","TTATAAAAAGTTCCAT",3,92.34,10.24,-0.52,0.06,2.88,1.03,0,">1 nonsynonymous","A81K L122R G155A",3
"lib1","SARS-CoV-2","TTATAAAAATAACACG",4,81.12,8.58,-2.19,0.11,2.74,1.05,0.01,">1 nonsynonymous","Y35R F126Y T201L",3
"lib1","SARS-CoV-2","TTATAAAACCGAATGT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","V103* K199E",2
"lib1","SARS-CoV-2","TTATAAAACGTACTTA",5,36.06,10.22,-0.54,0.09,2.51,1.08,0,">1 nonsynonymous","N13D S41R E141S P149V",4
"lib1","SARS-CoV-2","TTATAAAAGATAGAGA",7,104.82,10.37,-0.4,0.05,2.82,1.02,0,">1 nonsynonymous","A42I K48I N120L P197H",4
"lib1","SARS-CoV-2","TTATAAAAGTGTAAGT",6,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134T I142S",2
"lib1","SARS-CoV-2","TTATAAAATACAATTT",6,61.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S T63A T100S F160T",4
"lib1","SARS-CoV-2","TTATAAAATAGATAGG",3,40.12,7.58,-3.19,0.23,1.5,1.13,0.03,">1 nonsynonymous","A89G N157S",2
"lib1","SARS-CoV-2","TTATAAAATCCATAAT",8,141.76,9.75,-1.02,0.04,2.86,1.07,0,"1 nonsynonymous","S113T",1
"lib1","SARS-CoV-2","TTATAAACCACTCTAA",14,306.61,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y50M Y159T",2
"lib1","SARS-CoV-2","TTATAAACCGGGTAAT",1,53.04,10.9,0.13,0.09,2.91,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATAAACGACCACCA",2,81.87,10.58,-0.18,0.03,2.9,1.02,0,">1 nonsynonymous","N64T I104L T148W",3
"lib1","SARS-CoV-2","TTATAAACGTAGAACG",3,18.28,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","R16V K26V S29I V37A N92P D98C A105S G146Y",8
"lib1","SARS-CoV-2","TTATAAACGTATATAA",6,77.99,10.83,0.07,0.06,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATAAACTAATAAGC",2,14.15,9.42,-1.34,0.39,1.5,1,0.06,"1 nonsynonymous","W23G",1
"lib1","SARS-CoV-2","TTATAAAGACTTAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2L V65A Y121T Y143*",4
"lib1","SARS-CoV-2","TTATAAAGCAAGAGAA",6,140.88,10.77,0,0.05,2.91,1.06,0,"1 nonsynonymous","G196P",1
"lib1","SARS-CoV-2","TTATAAAGCCTATGCC",4,49.34,9.19,-1.58,0.08,2.7,1.13,0,">1 nonsynonymous","S43L T170A Y178L",3
"lib1","SARS-CoV-2","TTATAAAGTAACAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S N157P Y165R",3
"lib1","SARS-CoV-2","TTATAAAGTACCCGAG",5,37.92,10.41,-0.36,0.07,2.91,1.06,0,"1 nonsynonymous","Q84N",1
"lib1","SARS-CoV-2","TTATAAAGTTTTCCTG",14,122.5,8.67,-2.1,0.11,1.93,1.11,0,"1 nonsynonymous","N107I",1
"lib1","SARS-CoV-2","TTATAAATAAAGCCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* E141C",2
"lib1","SARS-CoV-2","TTATAAATCAAGACTA",1,17.83,7.16,-3.6,0.52,1.5,1.08,0.05,">1 nonsynonymous","W23V S45C K114C G166I",4
"lib1","SARS-CoV-2","TTATAAATCGGCCACA",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101I E141G G172W G196W",4
"lib1","SARS-CoV-2","TTATAAATGAATCAGT",4,81.35,10.59,-0.18,0.05,2.86,1.04,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","TTATAAATGTATTAAG",1,71.01,6.79,-3.98,0.31,1.5,1.17,0.02,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","TTATAAATTCACAGGG",4,21.3,8.48,-2.29,0.17,2.53,1.07,0.01,">1 nonsynonymous","A14T Y175N",2
"lib1","SARS-CoV-2","TTATAAATTTCTAGAC",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G F12L R136S",3
"lib1","SARS-CoV-2","TTATAAATTTTTATTA",3,79.59,10.81,0.05,0.08,2.91,1.02,0,"1 nonsynonymous","S200F",1
"lib1","SARS-CoV-2","TTATAACAACAATTTG",2,40.84,9.42,-1.35,0.31,1.5,1,0.05,">1 nonsynonymous","S43C N107W",2
"lib1","SARS-CoV-2","TTATAACAAGTCCTCT",9,109.34,9.59,-1.18,0.15,1.79,1.11,0.01,">1 nonsynonymous","L5N T46R T100S Q144G",4
"lib1","SARS-CoV-2","TTATAACAATTTTATC",5,0.85,NA,NA,NA,NA,NA,NA,"stop","V52I N64H G146N F185*",4
"lib1","SARS-CoV-2","TTATAACACAACAGGA",5,48.41,9.21,-1.55,0.07,2.81,1.16,0,"1 nonsynonymous","G155P",1
"lib1","SARS-CoV-2","TTATAACACACGATAC",2,19.25,10.48,-0.29,0.07,2.81,1.04,0,"1 nonsynonymous","K56P",1
"lib1","SARS-CoV-2","TTATAACACTCTATTT",1,45.8,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L38S F99R V115M",3
"lib1","SARS-CoV-2","TTATAACAGATACCTA",2,7.28,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","G9W L60Y Y119V S139H G174V",5
"lib1","SARS-CoV-2","TTATAACATCATTTAA",3,14.51,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","A81M D112T Y143K",3
"lib1","SARS-CoV-2","TTATAACATGCGATCT",4,13.13,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V20R D90Y",2
"lib1","SARS-CoV-2","TTATAACATTTCCGAA",3,36.85,10.73,-0.03,0.07,2.92,1.04,0,"1 nonsynonymous","G83Y",1
"lib1","SARS-CoV-2","TTATAACCAATAATTA",5,16.11,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","K48M I88G F99L K198L",4
"lib1","SARS-CoV-2","TTATAACCATATCGCG",1,0.44,NA,NA,NA,NA,NA,NA,"stop","C61* Q84L W106R",3
"lib1","SARS-CoV-2","TTATAACCGTTTCAAT",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105S C158L",2
"lib1","SARS-CoV-2","TTATAACGACAAATGA",6,101.17,8.53,-2.24,0.12,2.51,1.06,0.01,">1 nonsynonymous","T46A F126G",2
"lib1","SARS-CoV-2","TTATAACGATCTTGCC",2,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N K48F G117F Q168P",4
"lib1","SARS-CoV-2","TTATAACGCTGAATCC",1,11.72,10.47,-0.3,0.12,2.59,1,0.01,">1 nonsynonymous","L5F N13R D90Q",3
"lib1","SARS-CoV-2","TTATAACGCTTACTTA",5,6.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V77W V182R",2
"lib1","SARS-CoV-2","TTATAACGTGCTATCA",1,27.23,10.83,0.07,0.1,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATAACTATCCCCAA",3,7.48,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","K56W V103Q",2
"lib1","SARS-CoV-2","TTATAACTCAACGAAC",11,3.2,NA,NA,NA,NA,NA,NA,"stop","G83V G174*",2
"lib1","SARS-CoV-2","TTATAACTGAGAGTTG",4,109.02,10.13,-0.64,0.07,2.3,1.01,0,">1 nonsynonymous","Q84L Y123L",2
"lib1","SARS-CoV-2","TTATAACTGATAACCA",5,75.92,10.76,0,0.04,2.9,1.03,0,"1 nonsynonymous","Q144A",1
"lib1","SARS-CoV-2","TTATAACTGCTTGTAT",3,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K P82F I142L",3
"lib1","SARS-CoV-2","TTATAACTTCCTAATC",10,75.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","A81S D90N P177R",3
"lib1","SARS-CoV-2","TTATAAGAAGACCAAT",3,22.83,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","G9K V71W N120R",3
"lib1","SARS-CoV-2","TTATAAGACACACCTA",1,38.98,10.66,-0.11,0.07,2.94,1.03,0,"1 nonsynonymous","L187I",1
"lib1","SARS-CoV-2","TTATAAGAGTGAGAAC",3,70.03,10.78,0.02,0.08,2.86,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATAAGATTCGAATG",6,64.75,10.67,-0.09,0.08,2.87,1.11,0,">1 nonsynonymous","T100L N151L",2
"lib1","SARS-CoV-2","TTATAAGGAACTGAAC",3,44.72,10.26,-0.5,0.1,2.9,1.07,0,"1 nonsynonymous","K87S",1
"lib1","SARS-CoV-2","TTATAAGGCAGACATG",2,43.79,10.3,-0.47,0.06,2.79,1.02,0,">1 nonsynonymous","D34Y S147P",2
"lib1","SARS-CoV-2","TTATAAGGTAGATAAG",3,48.9,10.2,-0.56,0.13,2.55,1.03,0.01,"1 nonsynonymous","Q79R",1
"lib1","SARS-CoV-2","TTATAATAAGACACAG",5,104.44,10.8,0.04,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATAATACAACTTTA",4,20.52,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","S53E Y119F P161I",3
"lib1","SARS-CoV-2","TTATAATAGTGAGTAA",1,15.92,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","N92F S164W Q176M K199Y",4
"lib1","SARS-CoV-2","TTATAATATTCAGCCA",1,58.43,10.66,-0.11,0.02,2.93,1.03,0,"1 nonsynonymous","T63L",1
"lib1","SARS-CoV-2","TTATAATATTGTACAC",2,23.04,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","K56P N107Y",2
"lib1","SARS-CoV-2","TTATAATCGTTTCAAA",2,39.82,10.35,-0.41,0.07,2.9,1.01,0,">1 nonsynonymous","G9V D34N",2
"lib1","SARS-CoV-2","TTATAATCTGAGCGCT",3,56.44,10.4,-0.36,0.04,2.92,1.02,0,">1 nonsynonymous","K56M G174D",2
"lib1","SARS-CoV-2","TTATAATTACACGCGC",3,20.48,7.9,-2.87,0.4,1.61,1.04,0.07,">1 nonsynonymous","Y91F N110M R124S",3
"lib1","SARS-CoV-2","TTATAATTAGTAGATA",5,0.34,NA,NA,NA,NA,NA,NA,"stop","Y39G Q84L C102V L122*",4
"lib1","SARS-CoV-2","TTATAATTATATCGCT",6,46.03,10.68,-0.08,0.04,2.87,1.07,0,"1 nonsynonymous","E141K",1
"lib1","SARS-CoV-2","TTATAATTGACACCAA",4,14.72,6,-4.76,2,1.5,1.19,0.08,">1 nonsynonymous","F62P P82M N118L",3
"lib1","SARS-CoV-2","TTATAATTGTTAGTTC",2,28.06,6.45,-4.32,0.81,1.5,1.13,0.06,">1 nonsynonymous","R25N N151K L162S N171Y",4
"lib1","SARS-CoV-2","TTATACAACCAACGAG",2,137.61,10.46,-0.31,0.04,2.75,1.02,0,"1 nonsynonymous","E76A",1
"lib1","SARS-CoV-2","TTATACAAGTTCTCAT",1,29.88,7.65,-3.11,0.35,1.5,1.02,0.03,">1 nonsynonymous","A33S S41P G83N A89N",4
"lib1","SARS-CoV-2","TTATACAATAGGACTC",2,79.56,9.95,-0.82,0.05,2.8,1.05,0,"1 nonsynonymous","C6W",1
"lib1","SARS-CoV-2","TTATACAATAGTTTAA",3,23.29,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","R127G E135C G152Y Y175M",4
"lib1","SARS-CoV-2","TTATACAATATATTAT",5,106.65,10.82,0.05,0.07,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATACACACGAAGCT",2,21.61,10.3,-0.46,0.1,2.82,1,0,">1 nonsynonymous","T140E E186F",2
"lib1","SARS-CoV-2","TTATACACCTTTGAAA",3,13.67,9.6,-1.16,0.12,2.68,1.12,0.01,">1 nonsynonymous","P7M D59G K87P N120M",4
"lib1","SARS-CoV-2","TTATACACTAAACCAA",4,149.46,10.35,-0.42,0.05,2.87,1.03,0,">1 nonsynonymous","L57D P197M",2
"lib1","SARS-CoV-2","TTATACAGGAGACAAA",1,31.41,10.72,-0.04,0.03,2.97,1.01,0,">1 nonsynonymous","L5R V37G",2
"lib1","SARS-CoV-2","TTATACAGGGGCAACT",4,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y A81D E135G",3
"lib1","SARS-CoV-2","TTATACATCATTCTAA",5,12.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10G S41F F99R E135M",4
"lib1","SARS-CoV-2","TTATACATGGTACAAA",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70W L122R",2
"lib1","SARS-CoV-2","TTATACATTGCCACCG",7,0.14,NA,NA,NA,NA,NA,NA,"stop","F12V I80L G86Y G116* Q144P P197K",6
"lib1","SARS-CoV-2","TTATACCAAATTAACC",3,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G L60F P96L P161S F167L",5
"lib1","SARS-CoV-2","TTATACCAAGAAAAAC",3,16.75,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","Y39K S45N L57S G74Q G83Y S147L",6
"lib1","SARS-CoV-2","TTATACCACGACTAGA",6,22.65,10.69,-0.08,0.07,2.91,1.05,0,"1 nonsynonymous","I138T",1
"lib1","SARS-CoV-2","TTATACCCAAATTGAC",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K C61D P82Q P149L P169V",5
"lib1","SARS-CoV-2","TTATACCCATTTTACA",4,42.19,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","R25K Y35C T55M N92I N107H I138R G172L P197C",8
"lib1","SARS-CoV-2","TTATACCCGACAGCAC",2,35.82,8.17,-2.59,0.23,1.97,1.16,0.02,">1 nonsynonymous","S113K G152K",2
"lib1","SARS-CoV-2","TTATACCCGACCATTC",3,116.65,7.62,-3.14,0.09,2.46,1.12,0,">1 nonsynonymous","I28Y C158M",2
"lib1","SARS-CoV-2","TTATACCGAATCACAC",2,21.39,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","F12H L131K",2
"lib1","SARS-CoV-2","TTATACCGGTGGTGAT",4,16.87,6.85,-3.92,0.47,1.5,1.11,0.03,">1 nonsynonymous","C6F S43C A89M G166T",4
"lib1","SARS-CoV-2","TTATACCGTCTCTAAC",3,46.57,10.56,-0.21,0.05,2.86,1.04,0,">1 nonsynonymous","G51S T201W",2
"lib1","SARS-CoV-2","TTATACCTAAAAGAGT",3,27.04,6.21,-4.56,1.01,1.5,1.15,0.04,">1 nonsynonymous","V77R D90S L122A G152S N157T G172V",6
"lib1","SARS-CoV-2","TTATACCTCACATTGA",2,80.38,10.44,-0.32,0.05,2.86,1.09,0,">1 nonsynonymous","F156H T201Q",2
"lib1","SARS-CoV-2","TTATACCTGAGTAAAG",9,118.06,10.43,-0.34,0.06,2.87,1.05,0,">1 nonsynonymous","Y123V G174M",2
"lib1","SARS-CoV-2","TTATACCTTAATCTCC",5,121.33,10.44,-0.33,0.06,2.92,1.05,0,"1 nonsynonymous","K87L",1
"lib1","SARS-CoV-2","TTATACCTTACCTTTG",2,122.92,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","K94T Y119M T201E",3
"lib1","SARS-CoV-2","TTATACCTTACTTACG",3,48.32,10.3,-0.46,0.07,2.72,1,0,"1 nonsynonymous","G83I",1
"lib1","SARS-CoV-2","TTATACGACCTTATCT",10,256.27,9.37,-1.39,0.07,2.83,1.12,0,">1 nonsynonymous","Y121L G166R",2
"lib1","SARS-CoV-2","TTATACGACGCCAGTG",4,26.91,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55P F62S D97L R127N G166W",5
"lib1","SARS-CoV-2","TTATACGATATTATCA",6,16.59,9.05,-1.71,0.32,1.5,1.26,0.05,">1 nonsynonymous","S41H P96Y T201L",3
"lib1","SARS-CoV-2","TTATACGCAACCCATA",4,0,NA,NA,NA,NA,NA,NA,"stop","F8L Y91G D98T L122* D137Y",5
"lib1","SARS-CoV-2","TTATACGCCACAATGT",6,48.24,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V77M A89M G152S",3
"lib1","SARS-CoV-2","TTATACGCTGTACCAA",5,64.02,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","R25L N118D R179F",3
"lib1","SARS-CoV-2","TTATACGGAATCCTAA",2,0.85,NA,NA,NA,NA,NA,NA,"stop","R16M S45R D68W W106* T170S",5
"lib1","SARS-CoV-2","TTATACGGATTCCGAT",1,21.2,10.81,0.04,0.08,2.79,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATACGGTTATTAGT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17W S53M V65R",3
"lib1","SARS-CoV-2","TTATACGTAAGCCTTA",5,36.52,6.28,-4.48,0.8,1.5,1.33,0.03,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","TTATACGTAAGGAGAC",7,60.86,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","N40Y D97L S108N N118L K132P E154N",6
"lib1","SARS-CoV-2","TTATACGTTTTTAAGA",1,13.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V32K K56M V103L",3
"lib1","SARS-CoV-2","TTATACTACTTACAAT",1,125.98,10.84,0.07,0.08,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATACTATAATCCAA",2,16.64,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5I G9R L95E",3
"lib1","SARS-CoV-2","TTATACTCACATCGAT",8,68.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S43W L57F V65K Y91V",4
"lib1","SARS-CoV-2","TTATACTCACGTCTAC",1,1.08,NA,NA,NA,NA,NA,NA,"stop","D68N D97E F156*",3
"lib1","SARS-CoV-2","TTATACTCAGGTCTGA",6,28.16,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95K T170R",2
"lib1","SARS-CoV-2","TTATACTCATCAGCTA",3,45.79,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R73V L95R F160R",3
"lib1","SARS-CoV-2","TTATACTCCAGGTATG",1,20.5,8.85,-1.92,0.25,1.57,1.13,0.03,">1 nonsynonymous","L38W D98G Y178T",3
"lib1","SARS-CoV-2","TTATACTCCCGCAAAG",1,18.39,10.55,-0.21,0.09,3,1,0,">1 nonsynonymous","R27L Q163S",2
"lib1","SARS-CoV-2","TTATACTGGCTGGGCG",4,70.06,10.74,-0.02,0.06,2.87,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATACTGGGTGCAAA",7,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S T3K T15P V103F Y121T",5
"lib1","SARS-CoV-2","TTATACTGTGCCAATC",2,0.22,NA,NA,NA,NA,NA,NA,"stop","S113* N130L",2
"lib1","SARS-CoV-2","TTATACTTCAGCTAAC",4,40.41,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","G86Q L162P S184G",3
"lib1","SARS-CoV-2","TTATACTTTCTGCTGT",8,148.3,10.35,-0.42,0.04,2.87,1.03,0,"1 nonsynonymous","T15Y",1
"lib1","SARS-CoV-2","TTATAGAAAGAACAAA",1,8.75,6,-4.76,2,3,1.07,0,">1 nonsynonymous","Q84I L95H S139Y A145I",4
"lib1","SARS-CoV-2","TTATAGAAATGGCCAA",7,0.3,NA,NA,NA,NA,NA,NA,"stop","N30W Y91T Y123* E135T",4
"lib1","SARS-CoV-2","TTATAGAACCAGAAAT",4,41.45,9.39,-1.37,0.13,1.93,1.07,0.01,">1 nonsynonymous","S69R T100S",2
"lib1","SARS-CoV-2","TTATAGAACTGCTCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P D90N Y119R N130P G166K",5
"lib1","SARS-CoV-2","TTATAGAATAGTCTTT",1,22.04,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","C31M G86W F99G N118Q",4
"lib1","SARS-CoV-2","TTATAGACAAACATAA",3,6.41,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","I104Q G155T",2
"lib1","SARS-CoV-2","TTATAGACCAAGATAC",2,2.1,NA,NA,NA,NA,NA,NA,"stop","I2V E76*",2
"lib1","SARS-CoV-2","TTATAGACGGGCACAT",10,51.89,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C61K Y91V P161H",3
"lib1","SARS-CoV-2","TTATAGACTACATAAC",8,0.86,NA,NA,NA,NA,NA,NA,"stop","L5S F17K N40* K48Y N64S Q84Y I104M V181C K198V",9
"lib1","SARS-CoV-2","TTATAGAGTGTTTTAT",2,36.57,10.78,0.01,0.06,2.84,1.11,0,"1 nonsynonymous","N1F",1
"lib1","SARS-CoV-2","TTATAGATGTTCTTTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","W106E R127* G166F R179P",4
"lib1","SARS-CoV-2","TTATAGATTTCCTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K P149S P169R V181P",4
"lib1","SARS-CoV-2","TTATAGCAATGTGCCT",3,38.49,10.78,0.01,0.05,2.94,1,0,"1 nonsynonymous","S184V",1
"lib1","SARS-CoV-2","TTATAGCAGATAACTA",6,31.21,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I142S Y165C",2
"lib1","SARS-CoV-2","TTATAGCAGCTAAAGG",3,55.83,6.85,-3.91,0.11,1.65,1.09,0,">1 nonsynonymous","A22S C158S L188I",3
"lib1","SARS-CoV-2","TTATAGCCACAGAAAT",1,33.68,10.56,-0.2,0.07,2.88,1.06,0,"1 nonsynonymous","S41P",1
"lib1","SARS-CoV-2","TTATAGCCCACTTCTG",3,49.45,10.49,-0.28,0.05,2.89,1.02,0,"1 nonsynonymous","E10V",1
"lib1","SARS-CoV-2","TTATAGCCGGCACACA",1,1.76,NA,NA,NA,NA,NA,NA,"stop","A105M Y121L G146* Y159I",4
"lib1","SARS-CoV-2","TTATAGCGAAGATCGC",2,18.05,6,-4.76,2,3,1.08,0,">1 nonsynonymous","L5W F17D W23S G51T A105G",5
"lib1","SARS-CoV-2","TTATAGCTCACGTCAA",12,245.36,10.73,-0.04,0.04,2.94,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATAGCTCTAATGAC",1,31.04,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44M D112L N120K F167S",4
"lib1","SARS-CoV-2","TTATAGGAAATCAAGA",1,40.76,9.95,-0.81,0.07,2.79,1.04,0,">1 nonsynonymous","V20P F160L A192T",3
"lib1","SARS-CoV-2","TTATAGGAACAACCAC",5,94.63,10.07,-0.69,0.05,2.65,1.01,0,">1 nonsynonymous","T55K A81D",2
"lib1","SARS-CoV-2","TTATAGGACTACCTCT",6,112.13,10.7,-0.06,0.06,2.88,1.08,0,"1 nonsynonymous","G196A",1
"lib1","SARS-CoV-2","TTATAGGATCTATGAC",1,31.86,6.63,-4.14,0.3,2.06,1.14,0.01,">1 nonsynonymous","Y143D S147F",2
"lib1","SARS-CoV-2","TTATAGGTAGTAGAAA",4,1.36,NA,NA,NA,NA,NA,NA,"stop","G51Y Y93* L95T E141L G174W",5
"lib1","SARS-CoV-2","TTATAGTACCACCATA",5,82.42,10.6,-0.17,0.03,2.9,1.06,0,">1 nonsynonymous","C61L T100K",2
"lib1","SARS-CoV-2","TTATAGTACCAGTAGG",1,13.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89E R136N",2
"lib1","SARS-CoV-2","TTATAGTCCGCATCAC",1,85.98,10.4,-0.36,0.05,2.93,1.04,0,"1 nonsynonymous","D90W",1
"lib1","SARS-CoV-2","TTATAGTTAACGTTCA",10,214.58,8.88,-1.88,0.08,2.34,1.12,0,">1 nonsynonymous","K56S D90V Y119R",3
"lib1","SARS-CoV-2","TTATAGTTTAAACTGA",2,41.41,7.73,-3.03,0.27,1.5,1.1,0.02,">1 nonsynonymous","I28C S41Q N151L N157H",4
"lib1","SARS-CoV-2","TTATATAAAATTGAAG",4,0.78,NA,NA,NA,NA,NA,NA,"stop","N1* V37C N157R K198C",4
"lib1","SARS-CoV-2","TTATATAAATAAAATG",3,112.4,9.64,-1.12,0.11,2.63,1.08,0,">1 nonsynonymous","Q144F Y175F",2
"lib1","SARS-CoV-2","TTATATAAATACCTAC",2,9.04,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","S19Q V37S S45G A105E E141H",5
"lib1","SARS-CoV-2","TTATATAAATTATATA",3,15.46,6.43,-4.33,0.59,1.5,1.06,0.03,">1 nonsynonymous","P54S G86S A89V",3
"lib1","SARS-CoV-2","TTATATAACGAAACAG",18,397.14,10.42,-0.34,0.03,2.88,1.04,0,">1 nonsynonymous","R27L K56R V115G L122G",4
"lib1","SARS-CoV-2","TTATATAACGTCTATT",2,142.21,10.74,-0.03,0.05,2.93,1.02,0,">1 nonsynonymous","K48R G83S",2
"lib1","SARS-CoV-2","TTATATAAGAAGGCCC",1,12.93,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","C6L Y121E Q176D",3
"lib1","SARS-CoV-2","TTATATAAGATCGCAG",9,93.53,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","K26W Y35R N58L P96A N110L R136H Y143E G166V",8
"lib1","SARS-CoV-2","TTATATAAGTTAAGAA",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A L95A L125I",3
"lib1","SARS-CoV-2","TTATATACAACGCAAA",1,8.29,6.22,-4.54,1.83,1.5,1.46,0.07,">1 nonsynonymous","A14T F167M V173I",3
"lib1","SARS-CoV-2","TTATATACAGAATTCG",3,0,NA,NA,NA,NA,NA,NA,"stop","E10W K48F P54R T100Y G146P E154*",6
"lib1","SARS-CoV-2","TTATATACCGTAATTT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","S45* N58K T100* L183G",4
"lib1","SARS-CoV-2","TTATATACGAACGTCT",3,79.02,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","E10R N58Y P161H",3
"lib1","SARS-CoV-2","TTATATACTACGCTAC",9,9.78,NA,NA,NA,NA,NA,NA,"stop","Y66*",1
"lib1","SARS-CoV-2","TTATATAGCGTAGAGT",1,32.94,7.41,-3.36,0.29,1.5,1.01,0.04,">1 nonsynonymous","A89R F99S Y175W",3
"lib1","SARS-CoV-2","TTATATAGCGTAGCGG",3,17.21,10.83,0.07,0.06,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATATAGCTTGAACG",1,6.88,6.01,-4.75,0.86,3,1.12,0.02,">1 nonsynonymous","R127T C158A A192I",3
"lib1","SARS-CoV-2","TTATATAGGCACATGT",1,18.88,10.68,-0.08,0.08,2.98,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATATATAAGACCTC",1,7.68,6.1,-4.67,2,3,1.27,0.01,">1 nonsynonymous","F12E L95R I138L",3
"lib1","SARS-CoV-2","TTATATATACCCTTGG",10,144.69,10.68,-0.09,0.09,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATATATGAGATTCC",6,55.77,10.24,-0.52,0.07,2.78,1.04,0,">1 nonsynonymous","T3F F12L",2
"lib1","SARS-CoV-2","TTATATCACCAGGGAA",1,54.13,8.99,-1.78,0.21,1.74,1.17,0.02,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","TTATATCAGGAAAAGA",5,59.15,10.53,-0.24,0.04,2.94,1.03,0,">1 nonsynonymous","I2Q T85N Y91L T201G",4
"lib1","SARS-CoV-2","TTATATCCACTAGCGG",10,137.18,10.17,-0.6,0.06,2.71,1.02,0,">1 nonsynonymous","F12L T63M R78V I104L",4
"lib1","SARS-CoV-2","TTATATCCCAGTTATC",2,48.03,9.33,-1.44,0.11,1.67,1.15,0.01,">1 nonsynonymous","P96M F134E",2
"lib1","SARS-CoV-2","TTATATCCTACTTGCT",7,62.03,10.09,-0.67,0.07,2.53,1.05,0,"1 nonsynonymous","S45I",1
"lib1","SARS-CoV-2","TTATATCGTGATTTCT",2,43.54,10.57,-0.2,0.06,2.92,1.03,0,"1 nonsynonymous","D90L",1
"lib1","SARS-CoV-2","TTATATCTTTAGTATA",4,19.93,6,-4.76,2,3,1.13,0,">1 nonsynonymous","C6L V77F A89M",3
"lib1","SARS-CoV-2","TTATATCTTTCCTAAC",1,38.66,7.33,-3.43,0.14,1.89,1.19,0.01,">1 nonsynonymous","C150S T201I",2
"lib1","SARS-CoV-2","TTATATGAAAATTCAG",3,40.9,10.85,0.09,0.07,2.9,1.06,0,">1 nonsynonymous","S43R S129T",2
"lib1","SARS-CoV-2","TTATATGAACACGATT",3,30.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15A R73W",2
"lib1","SARS-CoV-2","TTATATGAGAGTGGTA",5,33.28,10.03,-0.73,0.24,1.64,1.1,0.04,">1 nonsynonymous","S45K D75P",2
"lib1","SARS-CoV-2","TTATATGATCTATATA",3,44.78,10.68,-0.08,0.05,2.84,1.11,0,">1 nonsynonymous","Y39L T100W",2
"lib1","SARS-CoV-2","TTATATGCAAAATGGT",6,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A Y21F R27Y Y39L I72R L122I G146A",7
"lib1","SARS-CoV-2","TTATATGCACTTCACA",1,12.74,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C49D D98E N110Y A192T K199L",5
"lib1","SARS-CoV-2","TTATATGCGAAGATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R Q84S D97P",3
"lib1","SARS-CoV-2","TTATATGCGAATGAAA",2,74,10.76,0,0.08,2.85,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATATGGAACAACTT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","F8T P96* G152T Y165A",4
"lib1","SARS-CoV-2","TTATATGGCTAGCCGT",7,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y L122K",2
"lib1","SARS-CoV-2","TTATATTAAAGTAGAT",8,124.66,8.91,-1.85,0.18,1.5,1.1,0.01,">1 nonsynonymous","L60S T140F Y165F S200N",4
"lib1","SARS-CoV-2","TTATATTAACAAAGAA",14,185.1,10.56,-0.21,0.04,2.91,1.06,0,"1 nonsynonymous","Q163N",1
"lib1","SARS-CoV-2","TTATATTACCAGCACG",2,38.88,9.62,-1.15,0.14,2.22,1.09,0.01,">1 nonsynonymous","F99L G174M L188M",3
"lib1","SARS-CoV-2","TTATATTACCTTAGAG",8,37.78,9.24,-1.52,0.16,1.76,1.17,0.01,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","TTATATTACTCCCGTT",2,39.77,8.63,-2.13,0.16,1.5,1.04,0.01,">1 nonsynonymous","A33E K48W",2
"lib1","SARS-CoV-2","TTATATTACTTATAGA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","L60P F70* D97K I104C Q144P",5
"lib1","SARS-CoV-2","TTATATTAGAAATCGC",1,7.4,9.51,-1.25,0.3,1.56,1.04,0.04,">1 nonsynonymous","V37W N64M I88A",3
"lib1","SARS-CoV-2","TTATATTAGTCGATCT",5,1.44,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib1","SARS-CoV-2","TTATATTGATTTACGG",8,97.11,9.41,-1.36,0.24,1.54,1.2,0.02,">1 nonsynonymous","C49Y G83K",2
"lib1","SARS-CoV-2","TTATATTGTAGACACG",2,12.39,10.2,-0.56,0.07,2.95,1,0,">1 nonsynonymous","F8L L38V G196D",3
"lib1","SARS-CoV-2","TTATATTTAACAATAT",9,108.87,10.02,-0.75,0.07,2.77,1.02,0,"1 nonsynonymous","Y165M",1
"lib1","SARS-CoV-2","TTATATTTAGAGACAT",10,166.08,10.36,-0.4,0.06,2.91,1.05,0,"1 nonsynonymous","E76M",1
"lib1","SARS-CoV-2","TTATATTTATATGAAT",1,53.87,10.77,0,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATATTTATGTATAC",3,97.9,7.11,-3.65,0.16,1.76,1.14,0.01,">1 nonsynonymous","I142V C158T T201C",3
"lib1","SARS-CoV-2","TTATATTTGCTCACGA",6,6.67,NA,NA,NA,NA,NA,NA,"stop","P96* T100M",2
"lib1","SARS-CoV-2","TTATATTTGGTCCGCC",4,21.6,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K48F K87G V115E E135R I142H",5
"lib1","SARS-CoV-2","TTATATTTTACGATCA",2,30.3,9.89,-0.87,0.12,2.55,1,0,">1 nonsynonymous","A33Y Y50T P82M",3
"lib1","SARS-CoV-2","TTATCAAAAAATCGAA",9,78.85,10.53,-0.24,0.03,2.94,1.02,0,"1 nonsynonymous","N40F",1
"lib1","SARS-CoV-2","TTATCAAAAATAGTGA",1,17.33,10.53,-0.23,0.08,2.86,1,0,">1 nonsynonymous","E10S K56R N109L",3
"lib1","SARS-CoV-2","TTATCAAAACTTAGGT",5,70.94,8.78,-1.98,0.13,2.81,1.1,0.01,">1 nonsynonymous","K87N P149Q F156G A190E",4
"lib1","SARS-CoV-2","TTATCAAACAACACTG",13,221.28,10.77,0,0.07,2.89,1.06,0,">1 nonsynonymous","V37L T46S",2
"lib1","SARS-CoV-2","TTATCAAACAGCTGGC",5,8.18,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","A67I G74L L125K E135S Y165V",5
"lib1","SARS-CoV-2","TTATCAAACGAGACCG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25Y Q144N",2
"lib1","SARS-CoV-2","TTATCAAATAAATGTA",8,83.84,10.12,-0.64,0.07,2.48,1.04,0,"1 nonsynonymous","G51V",1
"lib1","SARS-CoV-2","TTATCAAATGTTCGTA",2,45.5,10.69,-0.08,0.08,2.95,1,0,"1 nonsynonymous","E10K",1
"lib1","SARS-CoV-2","TTATCAAATTCTTTTC",7,51.19,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F47V S113M N118A T148K C158N",5
"lib1","SARS-CoV-2","TTATCAACCGCACATT",12,4.38,NA,NA,NA,NA,NA,NA,"stop","C6G V37I P96R W106*",4
"lib1","SARS-CoV-2","TTATCAACCTAAAATG",7,100.24,10.15,-0.61,0.05,2.83,1.03,0,"1 nonsynonymous","A33R",1
"lib1","SARS-CoV-2","TTATCAACGGATCATG",1,46.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Y N109S C158A",3
"lib1","SARS-CoV-2","TTATCAAGCTTGCAGG",4,57.26,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","R16V F44C D98V L183F",4
"lib1","SARS-CoV-2","TTATCAAGGACAGAGG",1,38.24,10.47,-0.3,0.09,2.9,1,0,"1 nonsynonymous","A18F",1
"lib1","SARS-CoV-2","TTATCAAGTACATGAG",6,93.05,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","C49L G152I G166S",3
"lib1","SARS-CoV-2","TTATCAATACTAAAGT",1,56.36,10.74,-0.02,0.09,2.9,1.08,0,"1 nonsynonymous","A18S",1
"lib1","SARS-CoV-2","TTATCAATCAATCTAT",8,254.59,10.28,-0.49,0.04,2.8,1.03,0,">1 nonsynonymous","N4D N64L F134S",3
"lib1","SARS-CoV-2","TTATCAATCAGAGAAG",3,24.86,9.84,-0.92,0.11,1.96,1.01,0.01,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","TTATCAATTGACAAAA",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R Y39H S43M R179W",4
"lib1","SARS-CoV-2","TTATCACAAAACTACA",4,76.47,10.65,-0.12,0.06,2.91,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCACAACCTCTGG",3,8.91,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","A18E A42V N107F T201A",4
"lib1","SARS-CoV-2","TTATCACACCGACATT",2,0,NA,NA,NA,NA,NA,NA,"stop","F8Q N64F W106* R136K",4
"lib1","SARS-CoV-2","TTATCACACGAATATT",1,8.86,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","S19F L60K V103K S113Q S129V E154L G174R",7
"lib1","SARS-CoV-2","TTATCACCCATGATTT",2,8.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N24Q G86D W106S P149L T170S",5
"lib1","SARS-CoV-2","TTATCACGACTATAAA",7,51.83,8.53,-2.24,0.43,1.5,1,0.06,">1 nonsynonymous","P7A L57T K114L R136T",4
"lib1","SARS-CoV-2","TTATCACTATCAATTA",3,36.15,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N1S S45W D90N D97M C158T V173T",6
"lib1","SARS-CoV-2","TTATCACTTACGACAA",1,7.17,10.33,-0.44,0.15,2.99,1.01,0.02,">1 nonsynonymous","A18P D34Q",2
"lib1","SARS-CoV-2","TTATCAGAAAAAGAAT",3,30.5,10.86,0.1,0.07,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCAGAAATACTGT",5,71.37,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9W S36W D90F L131Q",4
"lib1","SARS-CoV-2","TTATCAGAATGTTGAT",7,41.38,8.2,-2.56,0.4,1.5,1.1,0.06,">1 nonsynonymous","V20L A42D T46V N64V",4
"lib1","SARS-CoV-2","TTATCAGATACTGTGT",1,6.3,10.93,0.17,0.1,3,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATCAGCGAGTAAAT",10,96.09,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D59V V103T Y175P",3
"lib1","SARS-CoV-2","TTATCAGCGATGAAAT",2,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96G F160D",2
"lib1","SARS-CoV-2","TTATCAGTACTTCACG",3,86.8,8.92,-1.84,0.06,2.85,1.12,0,">1 nonsynonymous","K87V Y119F",2
"lib1","SARS-CoV-2","TTATCAGTCTCACTCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N40A G146*",2
"lib1","SARS-CoV-2","TTATCAGTGCCGGGGC",1,12.5,9.81,-0.95,0.11,2.53,1,0,">1 nonsynonymous","Y93F K114V",2
"lib1","SARS-CoV-2","TTATCATAATAGAAAA",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S N92K",2
"lib1","SARS-CoV-2","TTATCATATACGAGCA",11,2.21,NA,NA,NA,NA,NA,NA,"stop","L5Q T140I Y165* V180R",4
"lib1","SARS-CoV-2","TTATCATGCGAACCGT",7,95.47,7.48,-3.29,0.23,1.69,1.15,0.02,">1 nonsynonymous","W106L F126Q",2
"lib1","SARS-CoV-2","TTATCATTCGTACTAC",11,52.05,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F47Y V103S K114E S139D",4
"lib1","SARS-CoV-2","TTATCATTGTAATGCC",1,15.9,11.06,0.29,0.11,2.96,1,0,">1 nonsynonymous","R16T T100K",2
"lib1","SARS-CoV-2","TTATCCACAACAATAT",1,52.39,10.78,0.01,0.09,2.84,1.06,0,"1 nonsynonymous","T100M",1
"lib1","SARS-CoV-2","TTATCCACTCAATGCC",1,32.64,6,-4.76,2,1.5,1.21,0.07,">1 nonsynonymous","P7S S45D S129C Q144K L183S",5
"lib1","SARS-CoV-2","TTATCCACTTTATCAG",2,28.22,10.64,-0.12,0.07,2.94,1.05,0,"1 nonsynonymous","K56A",1
"lib1","SARS-CoV-2","TTATCCAGTATGCAAC",3,34.15,8.88,-1.89,0.18,1.89,1.16,0.02,">1 nonsynonymous","F12H E154S",2
"lib1","SARS-CoV-2","TTATCCAGTTCAGTCT",2,38.48,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A33R T63M F70S Y159I",4
"lib1","SARS-CoV-2","TTATCCATACCTCAGG",6,63.7,9.66,-1.11,0.08,2.58,1.08,0,">1 nonsynonymous","F8I R27F A67V I142L V153S",5
"lib1","SARS-CoV-2","TTATCCATATAGATAA",5,20.61,10.58,-0.18,0.12,2.91,1.07,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTATCCATCAATTGTA",1,12.69,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R27Y V65N I72K N107G S129M",5
"lib1","SARS-CoV-2","TTATCCATTATTCTAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","N24* C158K",2
"lib1","SARS-CoV-2","TTATCCATTGAACACG",3,201.74,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","E10K P177M",2
"lib1","SARS-CoV-2","TTATCCCAACGGATTG",6,77.36,10.67,-0.09,0.06,2.9,1.08,0,"1 nonsynonymous","R78T",1
"lib1","SARS-CoV-2","TTATCCCAAGCGAAAC",8,145.66,10.72,-0.04,0.04,2.96,1.01,0,">1 nonsynonymous","N1S F62P",2
"lib1","SARS-CoV-2","TTATCCCACCCCCCGG",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20N V71R Y93T Y119V H189M",5
"lib1","SARS-CoV-2","TTATCCCATACAAATT",6,25.69,7.41,-3.36,0.19,1.5,1.06,0.01,">1 nonsynonymous","Y50S P54A Y119F",3
"lib1","SARS-CoV-2","TTATCCCCAATACCGG",1,17.41,10.75,-0.01,0.06,2.89,1.07,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","TTATCCCGATGTAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71H I104K K199V",3
"lib1","SARS-CoV-2","TTATCCGCTAGAATCG",2,6.07,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","A42D I88G G196A",3
"lib1","SARS-CoV-2","TTATCCGGAAAGGAAC",5,67.82,10.15,-0.62,0.07,2.23,1,0,">1 nonsynonymous","T3R L57T D90N",3
"lib1","SARS-CoV-2","TTATCCGGGAACTATA",3,18.56,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","P7E N30V Y66M F99S",4
"lib1","SARS-CoV-2","TTATCCGGGCGATGGC",3,187.01,10.77,0,0.07,2.94,1.04,0,">1 nonsynonymous","S129K T201Y",2
"lib1","SARS-CoV-2","TTATCCGGTTGGTATT",3,0.49,NA,NA,NA,NA,NA,NA,"stop","I2* F12N R73D G86L Y93Q F99N K128I",7
"lib1","SARS-CoV-2","TTATCCGTACGACCCA",2,46.53,10.75,-0.01,0.06,2.85,1.04,0,"1 nonsynonymous","D90R",1
"lib1","SARS-CoV-2","TTATCCTATTAACAAT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","T3G F17* R27G F44N C49L T100S",6
"lib1","SARS-CoV-2","TTATCCTCAACCCACC",4,14.37,10.73,-0.03,0.07,2.94,1,0,"1 nonsynonymous","T3C",1
"lib1","SARS-CoV-2","TTATCCTGCTAAAAAA",1,26.36,10.67,-0.1,0.06,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCGAAAAAATGCT",10,73.03,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N64V P161K Y175H",3
"lib1","SARS-CoV-2","TTATCGAAATTACCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6D V32L P54G W106*",4
"lib1","SARS-CoV-2","TTATCGAAGCTTAACG",2,30.86,6.03,-4.73,1.54,1.5,1.17,0.06,">1 nonsynonymous","K94Y G146L",2
"lib1","SARS-CoV-2","TTATCGAATTCGCAAC",6,56.35,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","T3N E10V F167N",3
"lib1","SARS-CoV-2","TTATCGAATTTATGCT",3,35.37,10.26,-0.51,0.07,2.75,1.09,0,">1 nonsynonymous","S129C A145E",2
"lib1","SARS-CoV-2","TTATCGACAGCACAAG",4,13.5,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","N92H",1
"lib1","SARS-CoV-2","TTATCGACCTTGTTAC",6,63.85,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","W106C S139V Y159F",3
"lib1","SARS-CoV-2","TTATCGACGCAATTAC",1,6.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41G T55Y T63H W106K D112S T148F",6
"lib1","SARS-CoV-2","TTATCGAGAGCGAGTT",1,2,NA,NA,NA,NA,NA,NA,"stop","C6Y C31P P82Q N118V F134N T201*",6
"lib1","SARS-CoV-2","TTATCGAGGAGATATA",4,59.96,6.03,-4.73,1.7,1.5,1.25,0.04,">1 nonsynonymous","Y121C Y159S",2
"lib1","SARS-CoV-2","TTATCGCAGTATCGAT",14,226.68,10.43,-0.33,0.03,2.89,1.03,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","TTATCGCGTCAAAAAC",2,26.02,10.64,-0.12,0.05,3,1,0,">1 nonsynonymous","P7A F47I",2
"lib1","SARS-CoV-2","TTATCGGCAGCTGAGG",2,13.59,8.94,-1.83,0.18,1.84,1.12,0.02,"1 nonsynonymous","V77E",1
"lib1","SARS-CoV-2","TTATCGGTTTCATCTT",6,3.03,NA,NA,NA,NA,NA,NA,"stop","Y66* G86A D112*",3
"lib1","SARS-CoV-2","TTATCGTACGCCCCTA",1,16.25,10.43,-0.33,0.06,2.99,1,0,"1 nonsynonymous","P133E",1
"lib1","SARS-CoV-2","TTATCGTTAATAGGTT",4,43.42,6.83,-3.94,0.32,1.5,1.16,0.02,">1 nonsynonymous","W23S C31L",2
"lib1","SARS-CoV-2","TTATCGTTATTATAAC",7,19.17,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N4C V103K Y165M",3
"lib1","SARS-CoV-2","TTATCGTTCAGTAGAT",7,66.89,10.75,-0.02,0.04,2.91,1.03,0,"1 nonsynonymous","I2Y",1
"lib1","SARS-CoV-2","TTATCTAAAATAGATC",5,172.27,10.72,-0.05,0.04,2.95,1.02,0,"1 nonsynonymous","N4V",1
"lib1","SARS-CoV-2","TTATCTAAACAGCTTT",1,0.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147H",1
"lib1","SARS-CoV-2","TTATCTAAACCTATTG",6,83.78,10.79,0.02,0.06,2.95,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCTAACCCCCCTA",6,50.93,10.74,-0.02,0.07,2.88,1.02,0,"1 nonsynonymous","T3A",1
"lib1","SARS-CoV-2","TTATCTAATAAAACAT",10,55.57,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G51L P96T",2
"lib1","SARS-CoV-2","TTATCTACACCAAACT",2,16.35,6,-4.76,2,3,1.11,0,">1 nonsynonymous","N1I F62D T148A Q176K",4
"lib1","SARS-CoV-2","TTATCTACCCGACCAT",5,290.4,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T3Y I72F N107G Y119A",4
"lib1","SARS-CoV-2","TTATCTAGGAATAACA",4,71.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37W L122T C158R Q176L",4
"lib1","SARS-CoV-2","TTATCTAGGTCCTACT",9,1.24,NA,NA,NA,NA,NA,NA,"stop","L57* V77A T85N S129P G155W V173F V180K",7
"lib1","SARS-CoV-2","TTATCTAGTAAAAAAT",1,8.15,10.73,-0.03,0.07,3,1.02,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TTATCTATAAATTAAT",8,136.5,6.54,-4.23,0.39,1.5,1.15,0.02,">1 nonsynonymous","I2F N92S S129Q T140C P177S",5
"lib1","SARS-CoV-2","TTATCTATCAACCTCA",3,35.06,6.35,-4.41,0.46,1.5,1.17,0.02,">1 nonsynonymous","S53H R124N E135R G146S",4
"lib1","SARS-CoV-2","TTATCTCAATTAAATT",3,83.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38N V77M Y91S N157Y P191S",5
"lib1","SARS-CoV-2","TTATCTCATTGCCATG",1,11.4,6,-4.76,2,3,1.12,0,">1 nonsynonymous","W23L S41R V180K",3
"lib1","SARS-CoV-2","TTATCTCCACAGACTA",6,130.79,10.42,-0.35,0.07,2.82,1.02,0,">1 nonsynonymous","R25Q Y35W",2
"lib1","SARS-CoV-2","TTATCTCCCCCGATTT",1,12.52,9.14,-1.63,0.38,1.55,1.13,0.05,">1 nonsynonymous","V11R V32S A81S",3
"lib1","SARS-CoV-2","TTATCTCCTCTTAGAC",1,14.49,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","C6F W23S A81Y P96A G117L G155D",6
"lib1","SARS-CoV-2","TTATCTCGCTACCTGG",2,18.64,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L95K S129D D137R",3
"lib1","SARS-CoV-2","TTATCTCGTGCCCCAA",8,75.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V20H Y39V A105M Y123L",4
"lib1","SARS-CoV-2","TTATCTCTAAGTACAA",3,21.97,10.61,-0.15,0.1,2.81,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCTCTGAGTGGGG",2,15.13,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","K48H K114M Q144P G152K F167W",5
"lib1","SARS-CoV-2","TTATCTTAAGAAGTTT",3,33.86,10.7,-0.07,0.05,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCTTACGTCCAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F99* T140D",2
"lib1","SARS-CoV-2","TTATCTTAGTTTTTGA",1,32.76,10.27,-0.49,0.05,2.89,1,0,">1 nonsynonymous","I88V E141D Q144K P197H",4
"lib1","SARS-CoV-2","TTATCTTATGACCTAC",6,67.32,10.78,0.02,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATCTTCAAAGTACC",5,30.9,9.78,-0.98,0.06,2.89,1.03,0,"1 nonsynonymous","I142K",1
"lib1","SARS-CoV-2","TTATCTTCCATATGAC",2,39.91,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","R25F L60F L125S",3
"lib1","SARS-CoV-2","TTATCTTGTTAAAGGG",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V F99V",2
"lib1","SARS-CoV-2","TTATCTTTACCACATG",1,52.93,10.74,-0.03,0.03,2.92,1.05,0,"1 nonsynonymous","T148D",1
"lib1","SARS-CoV-2","TTATGAAAAAACCCAC",2,23.67,10.78,0.02,0.09,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATGAAAATGACAAA",12,165.71,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A22M A67T G86K N92L",4
"lib1","SARS-CoV-2","TTATGAAACTAATCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib1","SARS-CoV-2","TTATGAAAGAGATATA",6,41.77,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","C6L L131K Q168K V180W",4
"lib1","SARS-CoV-2","TTATGAAAGATAACTA",2,10.86,6,-4.76,2,1.5,1.02,0,">1 nonsynonymous","K48G S113P T170F",3
"lib1","SARS-CoV-2","TTATGAAAGATCCTTC",4,63.64,10.76,0,0.07,2.9,1.07,0,"1 nonsynonymous","S36T",1
"lib1","SARS-CoV-2","TTATGAAATCTACCCT",7,536.56,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","T46S A89R D98Y",3
"lib1","SARS-CoV-2","TTATGAAATTGACTCC",11,104.31,9.97,-0.79,0.12,2.64,1.03,0.01,">1 nonsynonymous","C6I A33Q N130H",3
"lib1","SARS-CoV-2","TTATGAAATTTTGACC",12,100.05,10.71,-0.06,0.05,2.92,1.03,0,">1 nonsynonymous","F134H P197G",2
"lib1","SARS-CoV-2","TTATGAACAGAATTTA",2,29.31,6,-4.76,2,1.5,1.23,0.05,">1 nonsynonymous","N4H I88E V153W Y159M",4
"lib1","SARS-CoV-2","TTATGAACATCTAAAC",5,66.3,9.53,-1.23,0.1,1.98,1.08,0,">1 nonsynonymous","C31M P149F E154S",3
"lib1","SARS-CoV-2","TTATGAACCGTGCGTG",6,14.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14D Y93N R136G T201G",4
"lib1","SARS-CoV-2","TTATGAACCTATCACA",9,98.9,8.38,-2.38,0.16,1.85,1.14,0.01,">1 nonsynonymous","L60R N107H",2
"lib1","SARS-CoV-2","TTATGAAGAAGGTGAC",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L N64D F99S",3
"lib1","SARS-CoV-2","TTATGAAGAGTGACAA",1,14.02,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T85L N107D E141G S200R",4
"lib1","SARS-CoV-2","TTATGAAGCACCTTAG",4,77.17,10.79,0.03,0.05,2.96,1.01,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","TTATGAAGCCCGATAC",3,5.16,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S19L Y39H D98L Q144E G172L V182G T201K",7
"lib1","SARS-CoV-2","TTATGAAGGAATCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15V Y91*",2
"lib1","SARS-CoV-2","TTATGAAGTGAACAAA",5,59,10.4,-0.36,0.04,2.95,1.01,0,">1 nonsynonymous","Y21W A42N",2
"lib1","SARS-CoV-2","TTATGAATACTCAGTT",4,27.71,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","C6A T46L P82Y P169Q K199V",5
"lib1","SARS-CoV-2","TTATGAATAGTATTAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S K87Q P149N V182P",4
"lib1","SARS-CoV-2","TTATGAATCGCGAAAG",1,7.9,6.66,-4.1,0.7,1.5,1.02,0.07,">1 nonsynonymous","C6Q K87C P161V",3
"lib1","SARS-CoV-2","TTATGAATGTAAGACG",1,10.91,6.23,-4.54,0.44,1.58,1.05,0,">1 nonsynonymous","A42L V77Q G117F",3
"lib1","SARS-CoV-2","TTATGAATTAATCCGT",6,22.51,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N13W C158Q",2
"lib1","SARS-CoV-2","TTATGAATTACCAGAA",4,13.96,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","W23Q N107V",2
"lib1","SARS-CoV-2","TTATGAATTCTTAGTC",7,31.32,6.99,-3.78,0.64,2,1.2,0.06,">1 nonsynonymous","W23F L60R L95G Q168L",4
"lib1","SARS-CoV-2","TTATGACACGAACACT",6,5.81,NA,NA,NA,NA,NA,NA,"stop","F8R F47M D90* F185*",4
"lib1","SARS-CoV-2","TTATGACACGACGATC",13,111.01,6,-4.76,2,3,1.25,0,">1 nonsynonymous","T63L P82E F167S",3
"lib1","SARS-CoV-2","TTATGACATCCTGCAA",3,33.76,10.61,-0.15,0.08,2.82,1.08,0,">1 nonsynonymous","N120S G152D",2
"lib1","SARS-CoV-2","TTATGACATGGATTTA",9,59.63,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S19A S41L G116E Y143N",4
"lib1","SARS-CoV-2","TTATGACCATCAAGAC",5,6.35,NA,NA,NA,NA,NA,NA,"stop","F44L Y66N F70D I80* D137T C158Y",6
"lib1","SARS-CoV-2","TTATGACGGTGGTAGA",1,5.6,10,-0.77,0.34,2.02,1,0.03,">1 nonsynonymous","Y35K I138Y",2
"lib1","SARS-CoV-2","TTATGACTAAAATTTC",1,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127V",1
"lib1","SARS-CoV-2","TTATGACTACCCGGAG",2,16.62,7,-3.77,0.21,2.19,1.19,0.01,">1 nonsynonymous","T85R L95F F156T",3
"lib1","SARS-CoV-2","TTATGACTCTGCTCGG",2,12.59,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","D34A P82H",2
"lib1","SARS-CoV-2","TTATGAGATTGTGAAC",3,2.55,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TTATGAGCAAACAAAT",3,51.39,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S36W P82T Y91Q",3
"lib1","SARS-CoV-2","TTATGAGCAAACAATC",2,1.62,NA,NA,NA,NA,NA,NA,"stop","T3S N110* N118V",3
"lib1","SARS-CoV-2","TTATGAGGCCACCAAC",11,51.11,7.1,-3.67,0.22,1.5,1.14,0.01,">1 nonsynonymous","N1R Y91S T170C",3
"lib1","SARS-CoV-2","TTATGAGTAGTCCAAA",5,7.37,NA,NA,NA,NA,NA,NA,"stop","L125* Y178I H189D",3
"lib1","SARS-CoV-2","TTATGATAAGAAATCG",5,78.64,10.72,-0.04,0.06,2.9,1.06,0,">1 nonsynonymous","S139R P197N",2
"lib1","SARS-CoV-2","TTATGATACCTGGCAT",4,94.39,9.45,-1.31,0.06,2.83,1.09,0,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","TTATGATACGTCAAGG",5,105.62,10.04,-0.72,0.09,2.74,1.01,0,"1 nonsynonymous","C6I",1
"lib1","SARS-CoV-2","TTATGATATGTAATAG",7,47.02,10.79,0.02,0.08,2.85,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATGATCCTCTTATT",2,35.08,10.81,0.05,0.06,2.89,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATGATTAAAACCAA",8,26.66,6.49,-4.27,0.43,1.59,1.08,0.03,">1 nonsynonymous","D59R N64I T100P",3
"lib1","SARS-CoV-2","TTATGATTAGTTAAAA",7,70.72,9.93,-0.84,0.09,2.15,1.08,0,">1 nonsynonymous","G83D L95M",2
"lib1","SARS-CoV-2","TTATGATTCAGAAAAG",1,40.04,6.17,-4.59,0.65,1.5,1.13,0.01,">1 nonsynonymous","S29R G51H D98A F167L",4
"lib1","SARS-CoV-2","TTATGCAAATGTCTAG",7,63.97,8.2,-2.56,0.2,1.89,1.18,0.02,">1 nonsynonymous","A105T N157F",2
"lib1","SARS-CoV-2","TTATGCAACGCTTGAC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","F12Q R25T W106S L122* G146W",5
"lib1","SARS-CoV-2","TTATGCAAGGGGAAGG",12,19.4,8.12,-2.64,0.42,1.5,1,0.06,">1 nonsynonymous","A42L C102Y",2
"lib1","SARS-CoV-2","TTATGCAATAGACGAT",2,6.4,7.28,-3.49,0.39,1.5,1.03,0.02,">1 nonsynonymous","D68E G146N V182T",3
"lib1","SARS-CoV-2","TTATGCACGTAGCTGA",2,63.5,10.66,-0.1,0.06,2.95,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATGCACGTGCGAGC",5,100.61,10.15,-0.62,0.05,2.45,1.03,0,">1 nonsynonymous","S45L D97N Y123K",3
"lib1","SARS-CoV-2","TTATGCAGATCATCGG",7,74.91,8.2,-2.57,0.19,1.5,1.11,0.01,">1 nonsynonymous","S43W I88A",2
"lib1","SARS-CoV-2","TTATGCATAGGTCCAA",1,4.75,NA,NA,NA,NA,NA,NA,"stop","P7* C61P Q84W",3
"lib1","SARS-CoV-2","TTATGCATTCTTGTGA",2,51.43,9.98,-0.79,0.1,2.41,1.04,0,">1 nonsynonymous","P96K F134L",2
"lib1","SARS-CoV-2","TTATGCCAGGGCAAGA",3,75.85,9.68,-1.08,0.09,2.25,1.07,0,">1 nonsynonymous","G9V Y121N A192D",3
"lib1","SARS-CoV-2","TTATGCCCTTTTACTT",4,56.53,9.57,-1.2,0.14,1.81,1.14,0.01,">1 nonsynonymous","N13C L60V T85A",3
"lib1","SARS-CoV-2","TTATGCCTCAAAATAA",3,58.96,10.64,-0.13,0.08,2.82,1.14,0,">1 nonsynonymous","G51N Y121H V153R",3
"lib1","SARS-CoV-2","TTATGCCTGATAAAAG",5,105.05,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","G86F A145T C158N",3
"lib1","SARS-CoV-2","TTATGCCTGATAATAA",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26S A42G N157S",3
"lib1","SARS-CoV-2","TTATGCCTGGAAGGCA",1,21.17,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","N4F R127V",2
"lib1","SARS-CoV-2","TTATGCGTTTTAAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G86* N120R",2
"lib1","SARS-CoV-2","TTATGCTAATTTAGGT",3,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S Y91K",2
"lib1","SARS-CoV-2","TTATGCTAGGGATCAA",6,102.2,10.6,-0.16,0.04,2.89,1.05,0,">1 nonsynonymous","F8L I104F T140P",3
"lib1","SARS-CoV-2","TTATGCTATATCCACC",1,25.7,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C49R N58I L95G F99L E141S",5
"lib1","SARS-CoV-2","TTATGCTCTCCAGAAG",8,64.19,6.02,-4.74,1.16,1.5,1.22,0.03,">1 nonsynonymous","F44S T100N R136W E141N",4
"lib1","SARS-CoV-2","TTATGCTGCGACTAAG",3,33,6,-4.76,2,1.5,1.18,0.01,"1 nonsynonymous","F167T",1
"lib1","SARS-CoV-2","TTATGCTGGCATTGGG",7,118.44,10.72,-0.04,0.05,2.91,1.06,0,"1 nonsynonymous","L5F",1
"lib1","SARS-CoV-2","TTATGGACACATACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2V S19* T46L P96N G155N S200*",6
"lib1","SARS-CoV-2","TTATGGACTTCTACGG",9,68.9,6,-4.76,1.59,1.5,1.16,0.01,"1 nonsynonymous","D112R",1
"lib1","SARS-CoV-2","TTATGGCATCCGATCT",4,64.51,10.73,-0.03,0.08,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATGGCGGGAGGTAT",7,36.28,10.73,-0.03,0.07,2.92,1.02,0,"1 nonsynonymous","V153A",1
"lib1","SARS-CoV-2","TTATGGGATGCCAATT",11,280.13,10.77,0.01,0.06,2.88,1.06,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TTATGGGATGGATGGC",1,44.52,10.86,0.1,0.07,2.8,1.12,0,">1 nonsynonymous","T85M N171V",2
"lib1","SARS-CoV-2","TTATGGGCGGAAGTAG",6,94.57,10.75,-0.02,0.06,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATGGTACAGAATAG",3,10.38,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","C61Q K132D P149G P161D",4
"lib1","SARS-CoV-2","TTATGGTAGACTTTAA",3,31.07,9.5,-1.26,0.39,1.5,1,0.05,">1 nonsynonymous","A89S G117C Y165H",3
"lib1","SARS-CoV-2","TTATGGTATATTGTAT",7,59.17,10.01,-0.75,0.16,1.93,1.02,0.01,">1 nonsynonymous","A33H S41L D90L D98K P197V",5
"lib1","SARS-CoV-2","TTATGGTATTTAAAGT",4,72.4,10.64,-0.13,0.04,2.93,1.04,0,">1 nonsynonymous","S45D T100N",2
"lib1","SARS-CoV-2","TTATGGTCACGAACCC",3,8.41,10.09,-0.67,0.37,2.49,1.01,0.03,"1 nonsynonymous","F185T",1
"lib1","SARS-CoV-2","TTATGGTCTAACATTT",2,37.09,9.71,-1.05,0.09,2.75,1.07,0,"1 nonsynonymous","R73L",1
"lib1","SARS-CoV-2","TTATGGTGAACACACC",4,38.79,6.1,-4.66,1.32,1.5,1.41,0.05,"1 nonsynonymous","G101S",1
"lib1","SARS-CoV-2","TTATGGTGTGATTGAA",3,71.72,10.1,-0.67,0.07,2.89,1,0,">1 nonsynonymous","D59W T170A",2
"lib1","SARS-CoV-2","TTATGTAAGCACAATT",1,10.98,8.53,-2.23,0.2,2.27,1.05,0.01,">1 nonsynonymous","I88V I104L G117H",3
"lib1","SARS-CoV-2","TTATGTAAGTCATATC",7,123.71,9.23,-1.54,0.1,2,1.14,0,">1 nonsynonymous","D98C G155F",2
"lib1","SARS-CoV-2","TTATGTAATAGGAAAC",2,26.75,9.91,-0.85,0.12,2.1,1,0.01,"1 nonsynonymous","I72A",1
"lib1","SARS-CoV-2","TTATGTACAACCCGAT",3,36.81,10.85,0.08,0.06,2.91,1.02,0,"1 nonsynonymous","T201H",1
"lib1","SARS-CoV-2","TTATGTACACATATAT",6,66.3,10.67,-0.09,0.07,2.85,1.1,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","TTATGTACCGGAATAT",6,97.83,9.78,-0.99,0.08,2.33,1.06,0,">1 nonsynonymous","N13Y G116V",2
"lib1","SARS-CoV-2","TTATGTACGCCCTATT",3,63.69,10.79,0.03,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATGTAGGATTACCA",3,19.64,10.68,-0.08,0.05,2.91,1.07,0,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","TTATGTATAACCTACA",5,45.79,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V65L V71M I104F R127V E154S",5
"lib1","SARS-CoV-2","TTATGTATATATTGAC",4,31.89,10.63,-0.14,0.08,2.84,1.11,0,"1 nonsynonymous","T63I",1
"lib1","SARS-CoV-2","TTATGTATATTTAAGG",3,0.76,NA,NA,NA,NA,NA,NA,"stop","C49L Y66* R73K P197L",4
"lib1","SARS-CoV-2","TTATGTATCGTATTCG",1,16.5,6.74,-4.02,0.33,1.5,1.07,0.01,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","TTATGTATGCAGTTTT",2,13.62,9.86,-0.9,0.1,2.05,1.02,0,">1 nonsynonymous","K56F N107G",2
"lib1","SARS-CoV-2","TTATGTCACGAGCTTT",1,13.92,10.57,-0.19,0.17,2.87,1.11,0.01,"1 nonsynonymous","S200R",1
"lib1","SARS-CoV-2","TTATGTCCGACGCAGC",1,5.31,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A42L R73H P96Y N157F",4
"lib1","SARS-CoV-2","TTATGTCCTACTAAGA",7,1.24,NA,NA,NA,NA,NA,NA,"stop","Y35* P133G",2
"lib1","SARS-CoV-2","TTATGTCGTGCATAGG",6,146.89,10.43,-0.34,0.05,2.9,1.04,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","TTATGTCTAGAAGATA",2,2.92,NA,NA,NA,NA,NA,NA,"stop","I2M A22* T46N N107P",4
"lib1","SARS-CoV-2","TTATGTCTATGAAAAC",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52A Y93T E154P",3
"lib1","SARS-CoV-2","TTATGTGACATAATAA",7,22.96,7.21,-3.55,0.37,1.5,1.14,0.05,">1 nonsynonymous","F70D C102N E141L",3
"lib1","SARS-CoV-2","TTATGTGCTCTTCAGG",4,123.69,10.79,0.03,0.07,2.9,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATGTGGCAAGATTC",3,7.79,6,-4.76,2,3,1.12,0,">1 nonsynonymous","S45V K94P V103G N157R V173H",5
"lib1","SARS-CoV-2","TTATGTGGCCCACCGA",3,13.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P Y35T S41F Q84P A89F I142M",6
"lib1","SARS-CoV-2","TTATGTTATACAGCAT",3,180.44,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","K87R S164G P177N",3
"lib1","SARS-CoV-2","TTATGTTATCCTGATA",5,23.88,7.34,-3.43,0.32,1.5,1.18,0.03,"1 nonsynonymous","Y93L",1
"lib1","SARS-CoV-2","TTATGTTCAAATGACT",1,18.66,10.61,-0.15,0.02,2.97,1.03,0,">1 nonsynonymous","A22L T201M",2
"lib1","SARS-CoV-2","TTATGTTCGGAGTTAG",2,9.78,7.65,-3.11,0.28,1.82,1.08,0.02,"1 nonsynonymous","R127E",1
"lib1","SARS-CoV-2","TTATGTTCTATTCATA",8,43.83,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G51T K56W K87R R124I Q163S",5
"lib1","SARS-CoV-2","TTATGTTGGCGTTAAA",3,38.6,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C31S N58S N107V K114Q",4
"lib1","SARS-CoV-2","TTATGTTTCAGCGTTC",2,41.82,6.74,-4.02,0.49,1.5,1.23,0.02,">1 nonsynonymous","Y35R P54V L60Q G117T T170S",5
"lib1","SARS-CoV-2","TTATGTTTTTAAACCA",4,40.06,10.7,-0.06,0.09,2.84,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATTAAAAAAAAGGG",4,77.15,9.61,-1.15,0.11,2.18,1.12,0.01,">1 nonsynonymous","Y121V P191F",2
"lib1","SARS-CoV-2","TTATTAAAAATAGTAT",1,25.08,10.33,-0.44,0.05,2.89,1.03,0,">1 nonsynonymous","A33L T63P",2
"lib1","SARS-CoV-2","TTATTAAAACAAAAAA",7,1.62,NA,NA,NA,NA,NA,NA,"stop","D98H V173*",2
"lib1","SARS-CoV-2","TTATTAAAACAACAAA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44M C150V Y159R T201I",4
"lib1","SARS-CoV-2","TTATTAAACGATCCGG",1,38.11,10.63,-0.13,0.04,2.86,1.11,0,"1 nonsynonymous","G83C",1
"lib1","SARS-CoV-2","TTATTAAACTATCGCG",1,16.7,6,-4.76,0.88,1.5,1.05,0.01,">1 nonsynonymous","S19M V37M C49R V65Y F156L",5
"lib1","SARS-CoV-2","TTATTAAAGATTTACC",4,51.48,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G9W T100D N107P Y119G N151F C158V",6
"lib1","SARS-CoV-2","TTATTAACAATTTGAC",1,27.26,10.85,0.09,0.1,2.84,1.04,0,"1 nonsynonymous","T201S",1
"lib1","SARS-CoV-2","TTATTAACACAGACAT",2,74.52,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G51I S113L L162V",3
"lib1","SARS-CoV-2","TTATTAACCAAATAGT",10,104.01,6,-4.76,0.91,1.5,1.14,0.01,">1 nonsynonymous","I28K F99Y N120S I142F Y175K K199Q",6
"lib1","SARS-CoV-2","TTATTAAGAAGTGACA",4,8.93,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F8G F99R",2
"lib1","SARS-CoV-2","TTATTAAGACGACGGA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","T46* V65S G101F",3
"lib1","SARS-CoV-2","TTATTAAGATTACTTA",10,108.8,6,-4.76,1.39,1.5,1.16,0.01,">1 nonsynonymous","Y39S T63S Y93I Y165V",4
"lib1","SARS-CoV-2","TTATTAAGCATAATGG",6,49.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F12G D98G L122A E135R",4
"lib1","SARS-CoV-2","TTATTAAGTTAAATAT",4,21,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","I80K V103S P149R",3
"lib1","SARS-CoV-2","TTATTAAGTTATATAA",3,32.42,10.68,-0.08,0.05,2.96,1.02,0,">1 nonsynonymous","C61R K114R S200K",3
"lib1","SARS-CoV-2","TTATTAATATTGCGCC",1,29.05,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T3V E10V V77A E135L",4
"lib1","SARS-CoV-2","TTATTAATCATATCTA",5,0.45,NA,NA,NA,NA,NA,NA,"stop","R16S S36M V52* I142F V153R",5
"lib1","SARS-CoV-2","TTATTAATGAAATCTG",4,37.82,10.22,-0.54,0.11,2.66,1.01,0,">1 nonsynonymous","V77Q T100I L122M N151L",4
"lib1","SARS-CoV-2","TTATTAATGTATCTAA",3,12.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T55V Y66L L125D F156G",4
"lib1","SARS-CoV-2","TTATTAATTTGCAAAA",5,0.96,NA,NA,NA,NA,NA,NA,"stop","G9T L60* N107K",3
"lib1","SARS-CoV-2","TTATTACAAAAGATAA",4,23.02,6.6,-4.16,0.46,1.5,1.11,0.03,">1 nonsynonymous","G86R N110R S184M",3
"lib1","SARS-CoV-2","TTATTACAACCTGGCG",1,28.51,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F12G F47S N171R",3
"lib1","SARS-CoV-2","TTATTACAAGAATTCG",2,7.1,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","G9Y A42S K94R D112K",4
"lib1","SARS-CoV-2","TTATTACACGAAACAG",5,15.68,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L5W T15I L57V K94T F99S G146V",6
"lib1","SARS-CoV-2","TTATTACATGTGGAAC",7,35.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I80T D90K T201I",3
"lib1","SARS-CoV-2","TTATTACCACCCTTGT",4,55.98,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","A14S D90Y S113W S200C",4
"lib1","SARS-CoV-2","TTATTACCACTAGCGG",4,121.89,10.21,-0.55,0.06,2.83,1.03,0,">1 nonsynonymous","S36L F47V C61M I104Y T140H",5
"lib1","SARS-CoV-2","TTATTACCAGGATAAA",5,27.35,10.88,0.12,0.07,2.91,1.02,0,"1 nonsynonymous","Q163L",1
"lib1","SARS-CoV-2","TTATTACCCTAACCGG",2,52.23,10.88,0.12,0.09,2.92,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATTACCGAATTAAT",3,27.76,10.29,-0.48,0.08,2.85,1.08,0,">1 nonsynonymous","G9I V115T T201M",3
"lib1","SARS-CoV-2","TTATTACCTAAATGAA",1,40.35,10.35,-0.41,0.05,2.82,1.12,0,"1 nonsynonymous","Y121I",1
"lib1","SARS-CoV-2","TTATTACGTCATTAAC",2,70.86,10.05,-0.72,0.06,2.78,1.02,0,">1 nonsynonymous","G51R N58D G152V",3
"lib1","SARS-CoV-2","TTATTACTGCGCGGTC",2,3.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181Q",1
"lib1","SARS-CoV-2","TTATTAGACCTAAACT",4,21.07,6,-4.76,2,3,1.28,0.02,">1 nonsynonymous","I104G G117D N130P C158M",4
"lib1","SARS-CoV-2","TTATTAGATAAATACG",12,114.86,10.92,0.15,0.07,2.95,1,0,">1 nonsynonymous","G9D L60M",2
"lib1","SARS-CoV-2","TTATTAGCATCGAAAC",2,105.91,10.04,-0.72,0.06,2.7,1.05,0,"1 nonsynonymous","Y178I",1
"lib1","SARS-CoV-2","TTATTAGCCAACTTAT",3,18.14,6,-4.76,2,1.5,1.32,0.02,">1 nonsynonymous","F12D N58P F156T",3
"lib1","SARS-CoV-2","TTATTAGGAAGTGATA",5,73.97,10.67,-0.09,0.05,2.9,1.07,0,"1 nonsynonymous","Y35V",1
"lib1","SARS-CoV-2","TTATTAGGAATTTTTT",3,20.65,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","C61S D90L V180S",3
"lib1","SARS-CoV-2","TTATTAGGCACATCAA",14,115.8,10.15,-0.61,0.09,2.22,1,0,"1 nonsynonymous","Q84W",1
"lib1","SARS-CoV-2","TTATTATACAATAACG",1,19.78,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L60T F167T",2
"lib1","SARS-CoV-2","TTATTATACCTTACTA",2,13.38,6.73,-4.04,0.72,1.54,1.16,0.07,">1 nonsynonymous","N64L D90V D112R S147C",4
"lib1","SARS-CoV-2","TTATTATCAACGAAAG",2,16.4,9.95,-0.82,0.12,2.78,1.19,0,">1 nonsynonymous","L60A G174E",2
"lib1","SARS-CoV-2","TTATTATCTAAATATC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13A Q84* N118V",3
"lib1","SARS-CoV-2","TTATTATCTAATACAA",6,80.4,8.67,-2.1,0.11,2.38,1.13,0,">1 nonsynonymous","Y35I F44S Y143F N157S",4
"lib1","SARS-CoV-2","TTATTATGTGCCTAAG",5,65.74,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4F Y39R D90V P96S",4
"lib1","SARS-CoV-2","TTATTATTCACAAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib1","SARS-CoV-2","TTATTATTGCGTATAA",5,15.47,10.89,0.13,0.07,3,1,0,">1 nonsynonymous","S147W E154Q",2
"lib1","SARS-CoV-2","TTATTATTTTTAATAG",7,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R G9T F70I Q84W L95H G116T F126L Q168F",8
"lib1","SARS-CoV-2","TTATTCAAATCAGCCG",1,39.41,10.65,-0.11,0.09,2.93,1.05,0,"1 nonsynonymous","Y39M",1
"lib1","SARS-CoV-2","TTATTCAACACATGGA",3,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R P96W V103F L162F",4
"lib1","SARS-CoV-2","TTATTCAACAGAAAAT",6,27.21,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","C49A C61A K128L",3
"lib1","SARS-CoV-2","TTATTCACCTCTAGAA",4,125.35,10.61,-0.15,0.13,2.82,1.08,0.01,"1 nonsynonymous","A18P",1
"lib1","SARS-CoV-2","TTATTCACGACCAAAA",5,0.58,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib1","SARS-CoV-2","TTATTCATCCAAGAGA",3,67.21,10.38,-0.39,0.07,2.78,1.05,0,">1 nonsynonymous","S41T D98V T140A S200Y",4
"lib1","SARS-CoV-2","TTATTCATGAACAATT",3,12.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6F D137P",2
"lib1","SARS-CoV-2","TTATTCATGGGAATGA",5,61.62,10.79,0.03,0.05,2.9,1.04,0,"1 nonsynonymous","T55I",1
"lib1","SARS-CoV-2","TTATTCATTTAGAGAA",4,41,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L60S V71S G101N Y119I C158Y G166P",6
"lib1","SARS-CoV-2","TTATTCCATCTACATT",7,50.19,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","W23Y D90W N107F",3
"lib1","SARS-CoV-2","TTATTCCGATCAAGAA",4,69.71,7.19,-3.57,0.18,1.67,1.13,0.01,">1 nonsynonymous","P149H P161D H189Q T201R",4
"lib1","SARS-CoV-2","TTATTCCGGACTATAC",2,19.7,8.88,-1.89,0.37,1.5,1.06,0.06,">1 nonsynonymous","K26L Y93F E135G",3
"lib1","SARS-CoV-2","TTATTCCTAAGAACCT",1,14.72,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","F12N N58R I72M",3
"lib1","SARS-CoV-2","TTATTCCTCTCTTCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A89F G116*",2
"lib1","SARS-CoV-2","TTATTCGATAAGCATT",5,89.45,10.75,-0.01,0.06,2.92,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATTCGCATATTGAC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","R16* T85L S113R T148G F156S",5
"lib1","SARS-CoV-2","TTATTCGGGCGCACTG",3,88.78,10.71,-0.06,0.04,2.96,1.01,0,">1 nonsynonymous","N130I P149V",2
"lib1","SARS-CoV-2","TTATTCGTAAATCAAT",7,26.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D75L E135L A190T",3
"lib1","SARS-CoV-2","TTATTCGTAAGCGCAG",1,9.37,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N130Y F167V",2
"lib1","SARS-CoV-2","TTATTCGTGGCCAAAG",12,65.05,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","C61V S108P E141S",3
"lib1","SARS-CoV-2","TTATTCTAAATCACTC",3,89.75,8.57,-2.2,0.17,2.36,1.1,0.01,">1 nonsynonymous","G83F D98C E141S N157D",4
"lib1","SARS-CoV-2","TTATTCTACAACACGG",2,82.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P Y50L T170S",3
"lib1","SARS-CoV-2","TTATTCTATCGATAGC",3,0.87,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","TTATTCTGTAGCTCAA",1,12.7,10.73,-0.04,0.06,3,1.02,0,">1 nonsynonymous","T3K S147I",2
"lib1","SARS-CoV-2","TTATTCTTATTCCTTG",2,137.59,10.75,-0.02,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATTGAAAATGCGTT",1,36.45,10.69,-0.07,0.02,2.92,1.05,0,">1 nonsynonymous","V32I T85E",2
"lib1","SARS-CoV-2","TTATTGAAAGGCAGTA",3,107.65,10.87,0.11,0.1,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATTGAACACAGATA",19,4.3,NA,NA,NA,NA,NA,NA,"stop","T85K Q176*",2
"lib1","SARS-CoV-2","TTATTGAACGGTTATG",14,201.55,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","K26C S43F Y50C D98S Y121K",5
"lib1","SARS-CoV-2","TTATTGATCAGATTAT",4,65.02,10.35,-0.41,0.06,2.81,1.04,0,">1 nonsynonymous","R136T K198H",2
"lib1","SARS-CoV-2","TTATTGATTAATGACA",2,29.98,10.73,-0.03,0.08,2.9,1.09,0,">1 nonsynonymous","P149H T201L",2
"lib1","SARS-CoV-2","TTATTGATTCGCTTGA",1,29.49,9.53,-1.23,0.12,2.47,1.13,0.01,">1 nonsynonymous","D59N D90H F126V",3
"lib1","SARS-CoV-2","TTATTGCAATAATATA",7,647.49,8.97,-1.79,0.1,1.78,1.08,0,">1 nonsynonymous","S45W P96I Y121L",3
"lib1","SARS-CoV-2","TTATTGCACCACATTC",2,10.28,6.43,-4.33,1.62,1.5,1.05,0.03,">1 nonsynonymous","C6F D34H K87D T100N",4
"lib1","SARS-CoV-2","TTATTGCAGTGTTATT",1,25.84,10.1,-0.66,0.09,2.3,1,0,">1 nonsynonymous","G9V N40M D90E",3
"lib1","SARS-CoV-2","TTATTGCCGTACGCGT",9,272.63,10.22,-0.55,0.04,2.68,1.04,0,">1 nonsynonymous","P96Q L122S",2
"lib1","SARS-CoV-2","TTATTGCCGTCAAAAC",1,9.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35I A42W K56E K87L Y123S G152L",6
"lib1","SARS-CoV-2","TTATTGCCTGAAGGAA",3,24.55,10.76,0,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTATTGCGATGAGAAC",6,101.72,10.9,0.14,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTATTGCGGACTAACT",10,121.35,10.69,-0.08,0.06,2.94,1.02,0,"1 nonsynonymous","K56V",1
"lib1","SARS-CoV-2","TTATTGCGTCTTAAAT",1,24.21,8.26,-2.51,0.2,1.96,1.07,0.02,"1 nonsynonymous","Y165S",1
"lib1","SARS-CoV-2","TTATTGGCAGTACAGG",5,76.56,9.15,-1.61,0.11,2.44,1.1,0,">1 nonsynonymous","D112L T201L",2
"lib1","SARS-CoV-2","TTATTGGCTAAATGCT",2,325.77,6.25,-4.51,0.5,1.5,1.19,0.01,">1 nonsynonymous","D137P T201L",2
"lib1","SARS-CoV-2","TTATTGGGACATTGCG",9,137.75,9.6,-1.16,0.12,1.76,1.13,0.01,">1 nonsynonymous","I28S T85K H189C",3
"lib1","SARS-CoV-2","TTATTGGTTCCCTACG",3,62.87,10.52,-0.24,0.04,2.94,1,0,">1 nonsynonymous","V32N G146A",2
"lib1","SARS-CoV-2","TTATTGGTTTACAACA",3,33.96,9.22,-1.55,0.06,2.83,1.13,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TTATTGTATAAAATGA",2,43.17,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","L57T D112L K128L F156L",4
"lib1","SARS-CoV-2","TTATTGTCATTACAAC",5,51.88,8.91,-1.86,0.22,1.77,1.14,0.02,">1 nonsynonymous","F47L N118I",2
"lib1","SARS-CoV-2","TTATTGTGAGACTCTT",2,5962.78,9.89,-0.87,0.06,2.06,1.04,0,">1 nonsynonymous","A89G K132H",2
"lib1","SARS-CoV-2","TTATTTAAAATACGAA",4,1.52,NA,NA,NA,NA,NA,NA,"stop","S19* C61F Q79K D90N C158T",5
"lib1","SARS-CoV-2","TTATTTAAAATGTTTG",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V C150R",2
"lib1","SARS-CoV-2","TTATTTAAAGTAAAAT",3,65.39,8.97,-1.8,0.09,2.23,1.07,0,">1 nonsynonymous","P82V Q168M",2
"lib1","SARS-CoV-2","TTATTTAAATAAGACG",4,105.26,10.45,-0.31,0.05,2.9,1.02,0,">1 nonsynonymous","K87L N120G",2
"lib1","SARS-CoV-2","TTATTTAAATAGGTAC",3,0.54,NA,NA,NA,NA,NA,NA,"stop","K56T I80* T85G A89V V115G",5
"lib1","SARS-CoV-2","TTATTTAAATAGTGTC",10,157.65,10.31,-0.46,0.03,2.96,1.01,0,"1 nonsynonymous","G174H",1
"lib1","SARS-CoV-2","TTATTTAACTTGTATT",10,2.72,NA,NA,NA,NA,NA,NA,"stop","K94S K114*",2
"lib1","SARS-CoV-2","TTATTTAAGATTCTCT",2,15.77,10.68,-0.08,0.12,2.89,1,0,"1 nonsynonymous","P149W",1
"lib1","SARS-CoV-2","TTATTTAAGTTCACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* C61N N107T",3
"lib1","SARS-CoV-2","TTATTTAATGATTAAT",1,15.34,6.1,-4.67,0.6,1.5,1.14,0.02,">1 nonsynonymous","Y66K T85L F126N S147T",4
"lib1","SARS-CoV-2","TTATTTACACGTATCA",4,207.85,10.57,-0.19,0.05,2.88,1.05,0,"1 nonsynonymous","F156W",1
"lib1","SARS-CoV-2","TTATTTACAGAACAAG",1,7.3,10.52,-0.24,0.11,2.92,1.01,0.01,"1 nonsynonymous","I138W",1
"lib1","SARS-CoV-2","TTATTTACCCCCAATA",3,45.84,7.88,-2.89,0.21,1.5,1.15,0.02,">1 nonsynonymous","S108Y N120D G152D",3
"lib1","SARS-CoV-2","TTATTTACTTCGTTGT",3,44.95,10.21,-0.55,0.06,2.75,1.03,0,">1 nonsynonymous","A81L P197S",2
"lib1","SARS-CoV-2","TTATTTAGATAATAAG",2,6.85,9.2,-1.56,0.28,1.74,1.06,0.03,">1 nonsynonymous","A105V L122Q G155V",3
"lib1","SARS-CoV-2","TTATTTAGATAATGTA",5,3.34,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib1","SARS-CoV-2","TTATTTAGGTGTCCCA",1,59.93,10.59,-0.18,0.07,2.93,1.06,0,">1 nonsynonymous","K56G H189L",2
"lib1","SARS-CoV-2","TTATTTAGTGCAACCA",8,131.85,8.29,-2.47,0.12,2.33,1.1,0.01,">1 nonsynonymous","R73Y D97L",2
"lib1","SARS-CoV-2","TTATTTATAATACCAG",6,0.69,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib1","SARS-CoV-2","TTATTTATGATACGCA",5,66.85,8.22,-2.54,0.18,1.79,1.12,0.01,">1 nonsynonymous","K56L N107L K128T",3
"lib1","SARS-CoV-2","TTATTTCAAGCTACCA",9,67.49,6,-4.76,1.35,1.5,1.25,0.01,">1 nonsynonymous","S45W I88Y F167Q",3
"lib1","SARS-CoV-2","TTATTTCACCTAACCT",6,130.97,9.64,-1.12,0.07,2.9,1.02,0,"1 nonsynonymous","F126I",1
"lib1","SARS-CoV-2","TTATTTCCATCATAAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","G9S Q84* W106R V173W",4
"lib1","SARS-CoV-2","TTATTTCTACAAGGTA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","G9T S53* S69V E76S P149F G166T",6
"lib1","SARS-CoV-2","TTATTTCTAGAATCAC",1,8.01,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","I104D C158I",2
"lib1","SARS-CoV-2","TTATTTCTTTTTACGT",3,32.57,9.88,-0.89,0.11,2.17,1.04,0,">1 nonsynonymous","F12W T100F E154G",3
"lib1","SARS-CoV-2","TTATTTGAACTCTTCC",5,34.77,10.08,-0.68,0.14,2.71,1.01,0.01,">1 nonsynonymous","G9C E141F",2
"lib1","SARS-CoV-2","TTATTTGAAGTAAATG",7,171.28,8.6,-2.16,0.08,2.44,1.09,0,">1 nonsynonymous","A105V Y119F S129T A190H",4
"lib1","SARS-CoV-2","TTATTTGAATAATGAA",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W V103A",2
"lib1","SARS-CoV-2","TTATTTGACAAATGGT",10,105.03,6,-4.76,0.89,1.5,1.13,0,">1 nonsynonymous","I88M K94V T148I N157G K198Q",5
"lib1","SARS-CoV-2","TTATTTGCTAATAATT",6,47.85,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A14S Y35A F167T",3
"lib1","SARS-CoV-2","TTATTTGTAACATTTA",2,22.47,10.71,-0.05,0.08,2.79,1.08,0,"1 nonsynonymous","T85L",1
"lib1","SARS-CoV-2","TTATTTGTACGTCAAC",9,312.51,6.82,-3.95,0.2,1.5,1.12,0.01,">1 nonsynonymous","P177V S200V",2
"lib1","SARS-CoV-2","TTATTTTAATGCTCTA",1,23.52,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","D112V G117K G146T Q163L P197L",5
"lib1","SARS-CoV-2","TTATTTTATAGCTTTC",5,26.1,6,-4.76,2,3,1.09,0,">1 nonsynonymous","P54L Y91T N107G Y121F N151L",5
"lib1","SARS-CoV-2","TTATTTTATGATTCAA",1,26.6,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","L95I L111S S129Q T140V Y159G",5
"lib1","SARS-CoV-2","TTATTTTATGTAGCCG",5,47.46,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","A18V L57F D112T L162E",4
"lib1","SARS-CoV-2","TTATTTTCAACTGTGA",5,150.09,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","N4G Y119T P177F",3
"lib1","SARS-CoV-2","TTATTTTCATTACGTA",5,71.31,10.21,-0.55,0.07,2.82,1,0,"1 nonsynonymous","F8V",1
"lib1","SARS-CoV-2","TTATTTTGAGAAAATC",8,44.28,10.65,-0.11,0.05,2.9,1.08,0,"1 nonsynonymous","A18E",1
"lib1","SARS-CoV-2","TTATTTTGCATCCATT",5,70.98,10.73,-0.03,0.04,2.9,1.05,0,">1 nonsynonymous","N1V S129A",2
"lib1","SARS-CoV-2","TTATTTTTATGTGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39N F44V I88L L188W",4
"lib1","SARS-CoV-2","TTATTTTTGTACAAAT",3,15.64,6,-4.76,2,3,1.05,0,">1 nonsynonymous","C49A D90I S113L",3
"lib1","SARS-CoV-2","TTCAAAAACGGGACTG",8,3.28,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib1","SARS-CoV-2","TTCAAAAACTCCTCTT",3,55.86,10.69,-0.07,0.1,2.96,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAAAAGGATTTAG",2,55.45,9.95,-0.81,0.06,2.89,1.04,0,"1 nonsynonymous","Y119K",1
"lib1","SARS-CoV-2","TTCAAAAATATTCATA",2,17.83,10.82,0.05,0.08,2.97,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAAAATATTTGGT",4,23.41,7.08,-3.68,0.4,1.5,1.07,0.04,">1 nonsynonymous","S36M W106D G152V T201R",4
"lib1","SARS-CoV-2","TTCAAAAATTCAAATC",1,8.89,10.54,-0.22,0.1,2.81,1.02,0,">1 nonsynonymous","S41L N120Y",2
"lib1","SARS-CoV-2","TTCAAAACACACAAAA",1,112.02,10.19,-0.58,0.04,2.92,1.02,0,">1 nonsynonymous","N110L P169H",2
"lib1","SARS-CoV-2","TTCAAAACAGAGGTCC",3,31.42,10.83,0.07,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAAACATAATTCT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R V103E",2
"lib1","SARS-CoV-2","TTCAAAACATCTGGAC",2,148.46,10.22,-0.55,0.04,2.81,1.02,0,">1 nonsynonymous","D34S I138N",2
"lib1","SARS-CoV-2","TTCAAAACTTATCATA",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S N151P",2
"lib1","SARS-CoV-2","TTCAAAACTTCAGCGA",3,35.36,6.09,-4.68,0.71,1.5,1.18,0.01,">1 nonsynonymous","V20R N58V E141S",3
"lib1","SARS-CoV-2","TTCAAAAGAATGAGTC",8,100.03,10.29,-0.47,0.05,2.94,1.01,0,"1 nonsynonymous","T63W",1
"lib1","SARS-CoV-2","TTCAAAAGACGGCGAC",1,21.37,10.6,-0.16,0.07,2.89,1.06,0,">1 nonsynonymous","D90Y F134Y",2
"lib1","SARS-CoV-2","TTCAAAAGAGCTATAA",2,31.29,9.15,-1.62,0.07,2.81,1.11,0,">1 nonsynonymous","D90N Y119M P149T",3
"lib1","SARS-CoV-2","TTCAAAATAAAGTTCT",4,73.12,10.24,-0.52,0.07,2.66,1.03,0,">1 nonsynonymous","A42M Y91V",2
"lib1","SARS-CoV-2","TTCAAAATGAGCATAT",3,42.6,10.71,-0.06,0.2,2.58,1,0.01,"1 nonsynonymous","S29W",1
"lib1","SARS-CoV-2","TTCAAAATTAACTACT",4,2.2,NA,NA,NA,NA,NA,NA,"stop","W23* G86V K94A K114R K132G",5
"lib1","SARS-CoV-2","TTCAAAATTATCTAGC",2,25.72,8.35,-2.42,0.29,1.69,1.17,0.03,">1 nonsynonymous","A14N Y123N E154I F160T",4
"lib1","SARS-CoV-2","TTCAAAATTCTTTATA",5,70.34,10.28,-0.49,0.06,2.85,1.01,0,">1 nonsynonymous","A14V V37Y",2
"lib1","SARS-CoV-2","TTCAAACAAGATAAAA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","R27M I104V Y121* K128V P149S T201S",6
"lib1","SARS-CoV-2","TTCAAACACAGCCGTA",7,148.91,10.3,-0.46,0.05,2.84,1.03,0,">1 nonsynonymous","N13Y S129N K198Q",3
"lib1","SARS-CoV-2","TTCAAACACTGAGCCT",3,81.52,10.74,-0.03,0.06,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAACAGTCATGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151L P161L Q168C S184A",4
"lib1","SARS-CoV-2","TTCAAACATGCATTAA",6,73.22,10.23,-0.53,0.07,2.82,1.03,0,">1 nonsynonymous","L38Q N130K",2
"lib1","SARS-CoV-2","TTCAAACATGTTCCAC",1,12.14,10.17,-0.6,0.11,2.87,1.07,0.01,">1 nonsynonymous","C61H K87S",2
"lib1","SARS-CoV-2","TTCAAACATTAACTCT",3,2.46,NA,NA,NA,NA,NA,NA,"stop","A22P D75M R136I V173*",4
"lib1","SARS-CoV-2","TTCAAACCACACTAAC",1,18.19,7.43,-3.34,0.35,1.5,1.11,0.06,">1 nonsynonymous","P7V N64I Y91S",3
"lib1","SARS-CoV-2","TTCAAACCAGGCAACT",2,31.68,6,-4.76,2,1.5,1.31,0.02,">1 nonsynonymous","T15L V37T S45M R73F K132N",5
"lib1","SARS-CoV-2","TTCAAACGAAACAAAT",3,28.16,6.95,-3.82,0.61,1.5,1.26,0.06,">1 nonsynonymous","A105R S113A",2
"lib1","SARS-CoV-2","TTCAAACGTACCACTA",6,37.11,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","K56R Y119S E154H P161I",4
"lib1","SARS-CoV-2","TTCAAACGTGGCGATT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","F17* S41L N110K L125H T148Y S184W P197N",7
"lib1","SARS-CoV-2","TTCAAACTAATCTCCG",2,46.4,9.67,-1.1,0.23,1.62,1.06,0.02,">1 nonsynonymous","N1D F44I D90I",3
"lib1","SARS-CoV-2","TTCAAACTAATTCGGT",3,1.48,NA,NA,NA,NA,NA,NA,"stop","E10N K56* W106G Y121F R179V",5
"lib1","SARS-CoV-2","TTCAAACTATAAGTAA",2,28.02,10.42,-0.34,0.06,2.87,1.02,0,">1 nonsynonymous","D90S I138S",2
"lib1","SARS-CoV-2","TTCAAACTCCTTTTCA",3,39.97,10.69,-0.07,0.12,2.9,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCAAACTGAACTGCG",1,22.99,10.33,-0.44,0.06,2.87,1.06,0,">1 nonsynonymous","R27V G51S L122W N151A",4
"lib1","SARS-CoV-2","TTCAAACTGTAAACGG",3,0.8,NA,NA,NA,NA,NA,NA,"stop","S45W D59Y Y66R P82D Y91A D98* V173K",7
"lib1","SARS-CoV-2","TTCAAACTGTGAGCAT",7,70.27,8.8,-1.97,0.11,2.4,1.09,0.01,">1 nonsynonymous","A22E S41G T170N S184M",4
"lib1","SARS-CoV-2","TTCAAACTGTTAGCGA",3,20.41,9.95,-0.82,0.15,1.86,1.11,0.01,">1 nonsynonymous","P7I D59L K128T",3
"lib1","SARS-CoV-2","TTCAAACTTCTCATAA",7,24.1,10.6,-0.17,0.09,2.95,1,0,"1 nonsynonymous","T140C",1
"lib1","SARS-CoV-2","TTCAAAGAAAAAGCAT",8,67.07,7.6,-3.16,0.25,1.5,1.14,0.02,"1 nonsynonymous","V20M",1
"lib1","SARS-CoV-2","TTCAAAGATAGCAAGC",3,65.57,6.27,-4.49,0.51,1.5,1.17,0.01,">1 nonsynonymous","P7S C150F K199H",3
"lib1","SARS-CoV-2","TTCAAAGCACGACCTT",5,122.09,10.75,-0.01,0.06,2.91,1.05,0,"1 nonsynonymous","G9Y",1
"lib1","SARS-CoV-2","TTCAAAGCATAATTAT",15,207.39,10.81,0.05,0.06,2.9,1.06,0,">1 nonsynonymous","D97R N110K",2
"lib1","SARS-CoV-2","TTCAAAGCCACTAGAA",1,11.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V37Y D68L W106A",3
"lib1","SARS-CoV-2","TTCAAAGCCATACAGA",1,32.67,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28A Y175K",2
"lib1","SARS-CoV-2","TTCAAAGCCTTAGACA",9,77.9,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F12S N64V A89V G101S G116W",5
"lib1","SARS-CoV-2","TTCAAAGCTTGGACTA",3,39.32,10.3,-0.46,0.05,2.9,1.03,0,"1 nonsynonymous","K87C",1
"lib1","SARS-CoV-2","TTCAAAGGAAATCTAA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M T63W D98C Q163F",4
"lib1","SARS-CoV-2","TTCAAAGGGCATATAG",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAAGGGCCACACC",2,26.22,10.84,0.07,0.09,2.91,1,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","TTCAAAGTCGCTTGAG",1,0.84,NA,NA,NA,NA,NA,NA,"stop","T3I Y121* G155S Y175M R179L",5
"lib1","SARS-CoV-2","TTCAAATAAGTAATAA",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64E F99C F167L S184L",4
"lib1","SARS-CoV-2","TTCAAATACAGTTGTA",1,126.67,10.11,-0.66,0.09,2.6,1.01,0,">1 nonsynonymous","Y91K T148Y T201A",3
"lib1","SARS-CoV-2","TTCAAATACTAGAACC",5,8.2,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6V N13M W106Q D112G",4
"lib1","SARS-CoV-2","TTCAAATATAACCGGT",3,68.11,10.82,0.06,0.06,2.93,1.05,0,"1 nonsynonymous","G9S",1
"lib1","SARS-CoV-2","TTCAAATATACAAGAG",4,136.02,10.7,-0.06,0.06,2.89,1.06,0,"1 nonsynonymous","S41M",1
"lib1","SARS-CoV-2","TTCAAATATAGTATCC",17,205.85,10.34,-0.43,0.04,2.87,1,0,">1 nonsynonymous","E10K C61K A89S",3
"lib1","SARS-CoV-2","TTCAAATATATACACA",2,18.49,10.51,-0.25,0.06,2.93,1,0,">1 nonsynonymous","S36L S45N",2
"lib1","SARS-CoV-2","TTCAAATATCACTATG",2,60.52,10.88,0.12,0.08,2.87,1.08,0,"1 nonsynonymous","S36D",1
"lib1","SARS-CoV-2","TTCAAATCATAAGATA",5,97.45,10.21,-0.55,0.06,2.77,1.02,0,">1 nonsynonymous","F12L S29P",2
"lib1","SARS-CoV-2","TTCAAATCGAACGCGT",6,0.52,NA,NA,NA,NA,NA,NA,"stop","A192*",1
"lib1","SARS-CoV-2","TTCAAATCTATAGGTA",2,42.19,6,-4.76,2,3,1.2,0,">1 nonsynonymous","T3V G74A L95I P177S",4
"lib1","SARS-CoV-2","TTCAAATGCAAACAAA",2,18.09,10.83,0.07,0.13,2.94,1,0.01,"1 nonsynonymous","F126L",1
"lib1","SARS-CoV-2","TTCAAATTAACTAACC",5,74.17,10.17,-0.6,0.08,2.79,1.02,0,">1 nonsynonymous","A67F P149L",2
"lib1","SARS-CoV-2","TTCAAATTACAACCGG",3,53.89,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","G9C G51E W106R L111A",4
"lib1","SARS-CoV-2","TTCAAATTACCCACTA",4,31.6,10.82,0.06,0.1,2.81,1.12,0,"1 nonsynonymous","T140S",1
"lib1","SARS-CoV-2","TTCAAATTATCACTAG",4,23.14,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N64M R179S",2
"lib1","SARS-CoV-2","TTCAAATTCGTATTAC",8,654.03,10.32,-0.44,0.03,2.91,1,0,"1 nonsynonymous","L60P",1
"lib1","SARS-CoV-2","TTCAAATTGACGCCTA",3,33.95,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C102V P161T A190V",3
"lib1","SARS-CoV-2","TTCAACAAAGAACGAC",2,32.58,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","R16C G172I",2
"lib1","SARS-CoV-2","TTCAACAAATGTACGG",4,89.16,8.56,-2.21,0.41,1.5,1,0.07,">1 nonsynonymous","T15L N92G K199V",3
"lib1","SARS-CoV-2","TTCAACAACAGACCAT",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81C P149T",2
"lib1","SARS-CoV-2","TTCAACAAGTATATTA",16,49.26,10.73,-0.03,0.05,2.88,1.08,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","TTCAACACAGATGCGG",5,31.93,7.64,-3.13,0.27,1.5,1.11,0.02,">1 nonsynonymous","V37L C49Y R78L F156N",4
"lib1","SARS-CoV-2","TTCAACACCACTCAAA",3,47.23,10.57,-0.19,0.09,2.91,1.01,0,">1 nonsynonymous","C61P L122Q K128E S164L",4
"lib1","SARS-CoV-2","TTCAACACGTACATGG",7,52.39,9.18,-1.58,0.09,1.74,1.17,0,">1 nonsynonymous","P54H D112V",2
"lib1","SARS-CoV-2","TTCAACACTGGCGAAA",1,20.05,7.88,-2.88,0.23,1.88,1.08,0.02,">1 nonsynonymous","C6Y L60M G117R",3
"lib1","SARS-CoV-2","TTCAACATAAGGTGGA",5,39.22,6.69,-4.07,0.43,1.5,1.12,0.03,">1 nonsynonymous","R25V S41T T85G Y93A T100N",5
"lib1","SARS-CoV-2","TTCAACATTATTAAAT",2,85.33,10.7,-0.07,0.04,2.89,1.03,0,"1 nonsynonymous","A42I",1
"lib1","SARS-CoV-2","TTCAACCAATAACACT",8,107.38,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V32W S43T P54T G83S K132I V173S L183V",7
"lib1","SARS-CoV-2","TTCAACCAGCCATAAA",1,15.33,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","P7I G83F F99S K114W R124G R136F S200D",7
"lib1","SARS-CoV-2","TTCAACCATGCGGGGC",4,19.78,10.71,-0.05,0.07,2.93,1.03,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","TTCAACCCTAAACACA",7,32.33,10.85,0.08,0.07,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAACCTAAGTGCTT",7,9.08,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib1","SARS-CoV-2","TTCAACCTACGTGTCA",2,9.46,10.15,-0.61,0.05,2.93,1.06,0,"1 nonsynonymous","N13L",1
"lib1","SARS-CoV-2","TTCAACCTAGGCCCAC",4,42.49,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R16I F70P G117A L131K T170P",5
"lib1","SARS-CoV-2","TTCAACCTATCTTCCT",4,1.07,NA,NA,NA,NA,NA,NA,"stop","N1L P7* N64S T140R",4
"lib1","SARS-CoV-2","TTCAACCTGAAGAGTA",10,74.58,10.25,-0.51,0.07,2.69,1.02,0,">1 nonsynonymous","A81N D98N S139T",3
"lib1","SARS-CoV-2","TTCAACCTGACCTCCA",2,45.59,10.02,-0.74,0.05,2.85,1.05,0,">1 nonsynonymous","V32R Q84G P169M",3
"lib1","SARS-CoV-2","TTCAACGAACCGATCA",1,86.09,10.76,0,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAACGAGTTATATA",1,24.4,6,-4.76,1.46,1.5,1.18,0.02,">1 nonsynonymous","L125I G172D",2
"lib1","SARS-CoV-2","TTCAACGATCTAGAGC",1,3.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103P",1
"lib1","SARS-CoV-2","TTCAACGCCGCTCAAT",3,17.29,10.43,-0.34,0.14,2.82,1.06,0.01,">1 nonsynonymous","A18G S36Y S43Q K114Q",4
"lib1","SARS-CoV-2","TTCAACGCGTAACATA",4,26.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49A G101M P149H",3
"lib1","SARS-CoV-2","TTCAACGTAACTAACT",5,181.81,8.35,-2.41,0.13,2.81,1.06,0.01,"1 nonsynonymous","Y175A",1
"lib1","SARS-CoV-2","TTCAACTAGATTTGAC",4,33.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S53L L60K D68L K87T A145T",5
"lib1","SARS-CoV-2","TTCAACTATCGCAACC",3,50.16,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I2A L38V Y66S T85F R127W",5
"lib1","SARS-CoV-2","TTCAACTCAAAATCAT",4,52.6,7.7,-3.07,0.38,1.5,1,0.07,">1 nonsynonymous","S147Q G152N F167H",3
"lib1","SARS-CoV-2","TTCAACTCCGGGAATT",6,576.84,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","F62K R78L W106R T140A N157L",5
"lib1","SARS-CoV-2","TTCAACTGAGTCAAAA",1,7.63,8.09,-2.67,0.32,1.5,1,0.02,">1 nonsynonymous","G101V S147N",2
"lib1","SARS-CoV-2","TTCAACTTAAGTATAT",5,40.36,7.61,-3.16,0.27,1.5,1.17,0.02,">1 nonsynonymous","S43T E135Y Q144V S184A T201R",5
"lib1","SARS-CoV-2","TTCAACTTAGACCCAG",6,20.19,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","N92T G116W E154I",3
"lib1","SARS-CoV-2","TTCAACTTCTTCCACC",4,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L F44L V71P T100Q V181D",5
"lib1","SARS-CoV-2","TTCAAGAAAAGTTATG",3,48.55,10.19,-0.57,0.1,2.25,1.04,0,"1 nonsynonymous","Y21P",1
"lib1","SARS-CoV-2","TTCAAGAAATACTTGA",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24L G172D",2
"lib1","SARS-CoV-2","TTCAAGAACTGGATAA",2,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S F70S",2
"lib1","SARS-CoV-2","TTCAAGAATTATCACA",1,25.08,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G83R Y93G P149L Q168G",4
"lib1","SARS-CoV-2","TTCAAGAATTTAGTTA",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104P G174L",2
"lib1","SARS-CoV-2","TTCAAGACAACCATCC",5,45.07,6,-4.76,2,3,1.21,0.01,">1 nonsynonymous","G83I F99R T148A",3
"lib1","SARS-CoV-2","TTCAAGAGCGTGATTA",1,54.4,10.69,-0.08,0.05,2.88,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAGAGGACATTTA",1,7.44,6.14,-4.62,2,1.5,1.09,0.02,">1 nonsynonymous","I2M G86R N92W V115C G152S P197R",6
"lib1","SARS-CoV-2","TTCAAGAGGTATTAGG",1,17.46,10.45,-0.31,0.38,2.19,1.22,0.04,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","TTCAAGAGTGTTCTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N40*",1
"lib1","SARS-CoV-2","TTCAAGATGAACTGTA",5,63.12,10.54,-0.23,0.05,2.82,1.12,0,"1 nonsynonymous","S184C",1
"lib1","SARS-CoV-2","TTCAAGATGGGAACTT",1,0.52,NA,NA,NA,NA,NA,NA,"stop","L60* G172K",2
"lib1","SARS-CoV-2","TTCAAGATGTCACATA",2,55.82,10.25,-0.52,0.04,2.86,1.03,0,">1 nonsynonymous","F134S G152S",2
"lib1","SARS-CoV-2","TTCAAGATGTTGCAAC",2,1.36,NA,NA,NA,NA,NA,NA,"stop","L5S T85L V115* Q176V",4
"lib1","SARS-CoV-2","TTCAAGATTAATCATG",3,136.28,10.74,-0.03,0.04,2.91,1.02,0,"1 nonsynonymous","S53L",1
"lib1","SARS-CoV-2","TTCAAGATTTGCCACC",1,11.66,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W106G R127E",2
"lib1","SARS-CoV-2","TTCAAGCAGAAAAGGA",1,31.25,10.58,-0.18,0.07,2.92,1.05,0,">1 nonsynonymous","S41P N130H",2
"lib1","SARS-CoV-2","TTCAAGCAGATGAATA",6,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A V77E L122K E135N",4
"lib1","SARS-CoV-2","TTCAAGCATCTCGAAT",11,134.66,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I28N P177V",2
"lib1","SARS-CoV-2","TTCAAGCATTCACACT",5,40.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14V G51L D90F I104L N151Y",5
"lib1","SARS-CoV-2","TTCAAGCCAAACTCAG",11,103.91,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","P7I D98C W106A F134S",4
"lib1","SARS-CoV-2","TTCAAGCCATGGGTAT",2,17.96,8.72,-2.04,0.27,1.59,1.1,0.02,">1 nonsynonymous","T46V N64L A89C L111K G152D",5
"lib1","SARS-CoV-2","TTCAAGCGCGGGCTTA",5,11.95,6.08,-4.68,0.66,3,1.29,0.01,">1 nonsynonymous","T3C C6R W106H G116K",4
"lib1","SARS-CoV-2","TTCAAGGAAGTCTAAT",3,46.38,9.98,-0.79,0.1,2.78,1.1,0,">1 nonsynonymous","R73T K114W",2
"lib1","SARS-CoV-2","TTCAAGGGGATTTTCG",1,1.21,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAGGTGCAGGTAA",3,38.36,10.73,-0.04,0.05,2.98,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAAGTAGTTACGGG",4,47.16,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","G83P K94H",2
"lib1","SARS-CoV-2","TTCAAGTATAAAAAGC",1,11.25,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K56L Y121C P133T",3
"lib1","SARS-CoV-2","TTCAAGTATAATAACC",2,32.36,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A14Q L38W N120A G146S F167I",5
"lib1","SARS-CoV-2","TTCAAGTCATATAAAT",4,1.35,NA,NA,NA,NA,NA,NA,"stop","Y91N T100*",2
"lib1","SARS-CoV-2","TTCAAGTCTTAACGAT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","N110* Y165Q",2
"lib1","SARS-CoV-2","TTCAAGTGATCAAATT",3,52.3,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A89D L95C S164F R179T",4
"lib1","SARS-CoV-2","TTCAAGTGCAAGTAAA",7,82.04,10.87,0.1,0.09,2.9,1.06,0,">1 nonsynonymous","L5P T140K",2
"lib1","SARS-CoV-2","TTCAAGTTGAAAAGAA",3,12.54,6.7,-4.06,0.28,1.7,1.02,0.01,">1 nonsynonymous","S41G P96H V182S",3
"lib1","SARS-CoV-2","TTCAATAAATGCTAAT",5,70.45,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","S108P",1
"lib1","SARS-CoV-2","TTCAATAACGACACGA",4,122.74,9.88,-0.89,0.07,2.61,1.02,0,">1 nonsynonymous","Y35L G51C N110M L125F",4
"lib1","SARS-CoV-2","TTCAATAACGACGAAC",1,29.05,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","I28W V77E Q84L N151F N157T",5
"lib1","SARS-CoV-2","TTCAATAAGAGCTTAT",1,33.35,6.02,-4.75,1.35,1.5,1.21,0.03,">1 nonsynonymous","N92I V103M F134N T201L",4
"lib1","SARS-CoV-2","TTCAATAAGGTGACAG",4,28.9,10.27,-0.49,0.08,2.96,1.02,0,"1 nonsynonymous","G152P",1
"lib1","SARS-CoV-2","TTCAATAATTTAACAA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","C31T L57*",2
"lib1","SARS-CoV-2","TTCAATACAAATAAGT",9,102.72,10.58,-0.19,0.06,2.86,1.07,0,"1 nonsynonymous","F47L",1
"lib1","SARS-CoV-2","TTCAATACATGCTGGT",3,64.74,10.16,-0.6,0.07,2.91,1,0,">1 nonsynonymous","D90L I138M C195F S200V",4
"lib1","SARS-CoV-2","TTCAATACTAAAATAC",6,6.7,7.56,-3.21,0.36,1.5,1,0.06,">1 nonsynonymous","D98R V103D N151D G172R",4
"lib1","SARS-CoV-2","TTCAATACTCATGCAC",5,89.03,10.72,-0.04,0.05,2.92,1.03,0,"1 nonsynonymous","T148A",1
"lib1","SARS-CoV-2","TTCAATAGATCCAATC",4,46.7,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","D68Q Q84Y",2
"lib1","SARS-CoV-2","TTCAATAGATCTCTTT",5,20.97,9.65,-1.12,0.24,2.07,1.07,0.03,">1 nonsynonymous","A14P S45D N64P",3
"lib1","SARS-CoV-2","TTCAATAGCGGAAGTC",2,12.99,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C6T T46A I104R",3
"lib1","SARS-CoV-2","TTCAATAGTCGATTTC",1,21.56,10.64,-0.13,0.16,2.77,1.11,0.01,"1 nonsynonymous","G9L",1
"lib1","SARS-CoV-2","TTCAATATAAACCCGA",3,10.1,10.55,-0.22,0.15,2.84,1.18,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTCAATATAAGTACGA",2,10.81,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A33P F44G F62I T100S D137G C150Y Y159I",7
"lib1","SARS-CoV-2","TTCAATATAGGCCCCT",1,6.57,6,-4.76,2,3,1.11,0.02,">1 nonsynonymous","S19M L95H N130Q",3
"lib1","SARS-CoV-2","TTCAATATCAATACTT",1,32.39,10.69,-0.08,0.08,2.88,1.05,0,"1 nonsynonymous","I104L",1
"lib1","SARS-CoV-2","TTCAATATCGAAATAT",5,32.65,7.48,-3.29,0.3,1.5,1.21,0.03,"1 nonsynonymous","F99P",1
"lib1","SARS-CoV-2","TTCAATATCTAACCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F Y119S",2
"lib1","SARS-CoV-2","TTCAATATGGCCGCAA",8,124.6,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","E10K C49H L57R D97A W106L Y123C Y178Q",7
"lib1","SARS-CoV-2","TTCAATATGGTCATAT",12,11.33,NA,NA,NA,NA,NA,NA,"stop","Y35* C61S T100C L122M",4
"lib1","SARS-CoV-2","TTCAATATTAACTGTT",16,66.71,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","K87F D112M R127V",3
"lib1","SARS-CoV-2","TTCAATATTGGGCCAA",1,0.34,NA,NA,NA,NA,NA,NA,"stop","R73P D97R A145*",3
"lib1","SARS-CoV-2","TTCAATCAAATCAAAA",8,123.87,9.86,-0.9,0.1,1.92,1.1,0,">1 nonsynonymous","F62Q G83W",2
"lib1","SARS-CoV-2","TTCAATCACAATAAAT",2,12.79,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","V20K W106R L122E P149S Y165T Y178D T201N",7
"lib1","SARS-CoV-2","TTCAATCACTAACAAG",3,71.01,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","T3M Y119S G152Y F160C G172R",5
"lib1","SARS-CoV-2","TTCAATCATCAAATCA",1,8.18,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","V11S L131I G146S Q176H A190Y",5
"lib1","SARS-CoV-2","TTCAATCATCAAGATG",6,126.74,10.76,-0.01,0.07,2.89,1.08,0,"1 nonsynonymous","Y35L",1
"lib1","SARS-CoV-2","TTCAATCCTAGCCCTC",2,12.28,9.99,-0.78,0.14,2.24,1.01,0.01,">1 nonsynonymous","A14I N64L",2
"lib1","SARS-CoV-2","TTCAATCTGCCGGACG",3,56.07,6,-4.76,2,3,1.23,0,">1 nonsynonymous","G86S K94Y D112M E141H F160M H189N",6
"lib1","SARS-CoV-2","TTCAATGAAGGAAACT",3,76.71,9.63,-1.13,0.2,1.6,1.12,0.02,">1 nonsynonymous","L5E P54T F70Y",3
"lib1","SARS-CoV-2","TTCAATGATATGAGAG",3,62.96,6,-4.76,2,1.5,1.18,0.03,"1 nonsynonymous","L95E",1
"lib1","SARS-CoV-2","TTCAATGGCCCTGATT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45C K94M N110A",3
"lib1","SARS-CoV-2","TTCAATGTTGCAGATA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","A81* N151M",2
"lib1","SARS-CoV-2","TTCAATTAAACAAGAC",2,0.55,NA,NA,NA,NA,NA,NA,"stop","E10R A18W G51S R127L Y165Q Y175*",6
"lib1","SARS-CoV-2","TTCAATTAAATTAAAC",4,0.23,NA,NA,NA,NA,NA,NA,"stop","L60S T100* N130L",3
"lib1","SARS-CoV-2","TTCAATTATTTAGTGG",5,122.79,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","L5P F17R F126I Y178D",4
"lib1","SARS-CoV-2","TTCAATTGATAAGCGT",2,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82A L122A C158Q",3
"lib1","SARS-CoV-2","TTCAATTGCCTTAGGT",4,48.8,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N4F R25I",2
"lib1","SARS-CoV-2","TTCAATTGGGGATGTA",2,6.32,9.95,-0.82,0.21,2.08,1,0.01,">1 nonsynonymous","A42I F47Y K56V V180I",4
"lib1","SARS-CoV-2","TTCAATTGGGTAACGT",2,36.13,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","T140A F167N T201D",3
"lib1","SARS-CoV-2","TTCAATTGTAATAATT",3,86.01,10.22,-0.54,0.05,2.69,1.01,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","TTCAATTGTTCAGAAG",5,0.88,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib1","SARS-CoV-2","TTCAATTTAAGCTATT",4,27.89,6,-4.76,2,1.5,1.19,0.03,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","TTCAATTTGTCTTGGA",3,138.88,10.41,-0.35,0.04,2.88,1.06,0,">1 nonsynonymous","F62N L188F",2
"lib1","SARS-CoV-2","TTCAATTTTTAATGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142G",1
"lib1","SARS-CoV-2","TTCACAAAAACACGGT",1,48.27,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","N92I N120L G174L R179N",4
"lib1","SARS-CoV-2","TTCACAAAAAGGATTA",5,10.35,6,-4.76,2,1.5,1.1,0.02,">1 nonsynonymous","C49A C61S Y91C Y119L P149R",5
"lib1","SARS-CoV-2","TTCACAAAATATCATA",1,25.65,9.65,-1.11,0.13,2.39,1.04,0.01,">1 nonsynonymous","V103T G174A",2
"lib1","SARS-CoV-2","TTCACAAACATTGCGT",8,40.61,6,-4.76,2,1.5,1.24,0.04,">1 nonsynonymous","V11Y Y121G F185Q",3
"lib1","SARS-CoV-2","TTCACAAACGAGAGCA",2,86.45,10.74,-0.02,0.04,2.88,1.04,0,"1 nonsynonymous","S139N",1
"lib1","SARS-CoV-2","TTCACAAACTGATTCA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","S45M Y50* P96Q K128V P197S",5
"lib1","SARS-CoV-2","TTCACAAAGATGTCTA",1,15.07,10.76,-0.01,0.11,2.91,1.02,0.01,"1 nonsynonymous","F62P",1
"lib1","SARS-CoV-2","TTCACAAAGTAGCCGG",4,56.52,6,-4.76,1.68,1.5,1.12,0.01,">1 nonsynonymous","T3R G83H S113M E141C V153T",5
"lib1","SARS-CoV-2","TTCACAAATAGTTTAT",3,57.27,8.72,-2.05,0.18,1.5,1.15,0.01,">1 nonsynonymous","C49V N64G S129N N151H",4
"lib1","SARS-CoV-2","TTCACAACACAGCCAC",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L V52E E141Y",3
"lib1","SARS-CoV-2","TTCACAACCATACCTG",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A F8Y T55C I88S N92I D112M G146V Y165P",8
"lib1","SARS-CoV-2","TTCACAACCTCGATAT",4,83.04,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N157L G172C Q176W T201Q",4
"lib1","SARS-CoV-2","TTCACAAGAGGTGACA",6,43.2,8.45,-2.32,0.2,1.75,1.11,0.02,">1 nonsynonymous","T55R V77K T170S",3
"lib1","SARS-CoV-2","TTCACAAGCAGTGCAA",4,30.77,6,-4.76,2,3,1.29,0.02,">1 nonsynonymous","G9K L122P N130T G146W Q176C",5
"lib1","SARS-CoV-2","TTCACAATCTAAAGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K D97S",2
"lib1","SARS-CoV-2","TTCACAATTACTCTTA",2,12.47,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","F12R L38G K114V Q144L",4
"lib1","SARS-CoV-2","TTCACACAACCGTCAA",3,14.2,9.08,-1.69,0.23,1.7,1.14,0.03,">1 nonsynonymous","N30G T55I I104L G155F",4
"lib1","SARS-CoV-2","TTCACACAATAAAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","V52Y G155C S200*",3
"lib1","SARS-CoV-2","TTCACACACGTTTCAA",5,99.08,9.91,-0.86,0.09,1.96,1.05,0,">1 nonsynonymous","N24V S45L",2
"lib1","SARS-CoV-2","TTCACACCACTGGGAG",6,0,NA,NA,NA,NA,NA,NA,"stop","S43Y Q176* K199*",3
"lib1","SARS-CoV-2","TTCACACCATACCCTA",3,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K N24Q A42P",3
"lib1","SARS-CoV-2","TTCACACCCCAATATA",1,9.93,6.36,-4.41,0.35,2.71,1.08,0.01,"1 nonsynonymous","C150D",1
"lib1","SARS-CoV-2","TTCACACCGCCTGTAA",5,48.29,6.02,-4.74,0.6,1.5,1.08,0.01,">1 nonsynonymous","V37L G51T F134W C158R",4
"lib1","SARS-CoV-2","TTCACACGCACTACCC",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72R S139R L162A",3
"lib1","SARS-CoV-2","TTCACACGGAATCTTG",14,6.55,NA,NA,NA,NA,NA,NA,"stop","R25L Y123L F167*",3
"lib1","SARS-CoV-2","TTCACACTAAATATCT",6,36.84,6,-4.76,2,3,1.1,0,">1 nonsynonymous","L60F K128F Y159R Q168P T201V",5
"lib1","SARS-CoV-2","TTCACACTCATTAGCA",7,83.37,7.16,-3.6,0.32,1.5,1.2,0.03,">1 nonsynonymous","C61A C102W Q168T",3
"lib1","SARS-CoV-2","TTCACAGAAGCACCCT",4,59.72,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y91F F99R N171D",3
"lib1","SARS-CoV-2","TTCACAGGCCTAGAAA",6,98.79,9.32,-1.44,0.11,1.93,1.11,0,"1 nonsynonymous","G86D",1
"lib1","SARS-CoV-2","TTCACAGGTGATGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N151Q Q168R K199*",3
"lib1","SARS-CoV-2","TTCACAGTGGCTGAGG",2,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D90A S113W R127P",4
"lib1","SARS-CoV-2","TTCACATAAACACAAA",4,51.01,10.76,0,0.04,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCACATACAAGTTAT",5,0.7,NA,NA,NA,NA,NA,NA,"stop","C31R D68* G86W D98S Y143P E154Y",6
"lib1","SARS-CoV-2","TTCACATAGATCTATT",5,86.73,10.78,0.02,0.07,2.89,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCACATTCGTATTAC",2,67.94,10.33,-0.44,0.03,2.83,1.07,0,">1 nonsynonymous","T55A A81V",2
"lib1","SARS-CoV-2","TTCACCAAATCTAACC",2,19.99,10.8,0.04,0.07,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCACCAAATTACCTT",9,94.63,6.51,-4.25,0.28,1.5,1.15,0.01,">1 nonsynonymous","C6W I142R K198L",3
"lib1","SARS-CoV-2","TTCACCAACAGTACCG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib1","SARS-CoV-2","TTCACCAACTAGCCCT",4,73.52,10.85,0.09,0.08,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCACCAGTCCATAGC",4,50.99,8.9,-1.87,0.21,1.95,1.07,0.02,">1 nonsynonymous","C6L N107P",2
"lib1","SARS-CoV-2","TTCACCCAAGGCGGTC",6,21.32,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","G86N Y93W W106A G117Y F160M",5
"lib1","SARS-CoV-2","TTCACCCACTCTCAAG",5,61.7,10.11,-0.65,0.04,2.96,1,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","TTCACCCATACCATCT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","N1S E10Y S19T D68* Q84K",5
"lib1","SARS-CoV-2","TTCACCCATGTACATT",1,16.97,9.03,-1.74,0.26,2.29,1.17,0.03,">1 nonsynonymous","N109V Y119W E141L",3
"lib1","SARS-CoV-2","TTCACCCCTAACAAAT",13,2.01,NA,NA,NA,NA,NA,NA,"stop","A18V S113G F134R S184*",4
"lib1","SARS-CoV-2","TTCACCCTGCGTAAAT",2,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E P96S",2
"lib1","SARS-CoV-2","TTCACCCTGTCCACCA",2,9.22,7.06,-3.7,0.86,1.5,1.07,0.01,">1 nonsynonymous","A22I S36A S129F G155C",4
"lib1","SARS-CoV-2","TTCACCGAATTGCTCC",6,49.81,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","V65K G74F C158K",3
"lib1","SARS-CoV-2","TTCACCGACTACACCA",2,0.9,NA,NA,NA,NA,NA,NA,"stop","N40* F99Y V115R S147N",4
"lib1","SARS-CoV-2","TTCACCGATCCCCCTA",3,43.69,8.36,-2.4,0.22,1.5,1.16,0.01,">1 nonsynonymous","I2A F44S P96G Y123S",4
"lib1","SARS-CoV-2","TTCACCGCCCTATTTC",6,61.64,10.08,-0.68,0.11,2.6,1.01,0.01,">1 nonsynonymous","K48F C61Y",2
"lib1","SARS-CoV-2","TTCACCGGGATGAGGT",1,15.73,6,-4.76,2,3,1.29,0.03,">1 nonsynonymous","G9A S41A D68L",3
"lib1","SARS-CoV-2","TTCACCTAATAGACCA",9,77.27,8.83,-1.94,0.14,1.5,1.09,0.01,">1 nonsynonymous","F17G T100V A105G",3
"lib1","SARS-CoV-2","TTCACCTAGCCCCCCT",1,54.2,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S36H F47G Y66L",3
"lib1","SARS-CoV-2","TTCACCTCAAGGTATA",1,19.68,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L38Y Q84D G116H",3
"lib1","SARS-CoV-2","TTCACCTCGTACCGAA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","A105V T140*",2
"lib1","SARS-CoV-2","TTCACGAAAGTGTTAA",3,20.5,9.78,-0.99,0.09,2.43,1.02,0,">1 nonsynonymous","N4S A18F V65L L95V",4
"lib1","SARS-CoV-2","TTCACGAAATCACCAA",1,21.35,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P133I I142K",2
"lib1","SARS-CoV-2","TTCACGAAGAAATACT",3,30.63,7.32,-3.44,0.34,1.5,1.18,0.04,">1 nonsynonymous","N40F K114G N130E E141Q S184F P191H",6
"lib1","SARS-CoV-2","TTCACGAATATGTTGG",3,7.97,6,-4.76,2,3,1.13,0,">1 nonsynonymous","V103A S113Q F160M",3
"lib1","SARS-CoV-2","TTCACGACCTCCCTTT",3,48.6,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","G9S V115R R124T R136F",4
"lib1","SARS-CoV-2","TTCACGAGACGAATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","N40Y C61D C102*",3
"lib1","SARS-CoV-2","TTCACGCAGACTATCA",3,83.68,10.13,-0.63,0.1,2.08,1.02,0,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","TTCACGCAGGCAAACG",4,57.99,6,-4.76,2,3,1.16,0,">1 nonsynonymous","F8G S41P C49T G86V L95P G172K",6
"lib1","SARS-CoV-2","TTCACGCATTTGTGCC",2,23.81,6,-4.76,1.53,3,1.14,0,">1 nonsynonymous","F62M A81D V103H",3
"lib1","SARS-CoV-2","TTCACGCCCATATTGC",5,1.79,NA,NA,NA,NA,NA,NA,"stop","W23M Q79R N120*",3
"lib1","SARS-CoV-2","TTCACGCGAACTTATT",3,40.49,9.49,-1.27,0.07,2.68,1.17,0,"1 nonsynonymous","I142R",1
"lib1","SARS-CoV-2","TTCACGCGGTCGACCT",7,2.38,NA,NA,NA,NA,NA,NA,"stop","P54V I80T E141* C150V",4
"lib1","SARS-CoV-2","TTCACGCTACAACCAG",2,40.36,10.82,0.05,0.09,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCACGCTACAACTCA",1,8.91,10.78,0.02,0.08,2.85,1.1,0,">1 nonsynonymous","D97S T201R",2
"lib1","SARS-CoV-2","TTCACGGAAATCTCTT",1,19.37,10.17,-0.59,0.14,2.11,1.02,0.01,"1 nonsynonymous","L131A",1
"lib1","SARS-CoV-2","TTCACGGATCCATAAA",1,20.56,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","Y50C T63V D97Y",3
"lib1","SARS-CoV-2","TTCACGGCGAACTAAA",2,40.58,8.53,-2.23,0.11,1.78,1.13,0,">1 nonsynonymous","T55F D90L G155I",3
"lib1","SARS-CoV-2","TTCACGGGACGTCATC",1,83.86,8.5,-2.26,0.14,3,1.04,0.01,">1 nonsynonymous","F126S P197Q",2
"lib1","SARS-CoV-2","TTCACGGTCAGGCCCC",3,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L I28R R78N F99Y",4
"lib1","SARS-CoV-2","TTCACGGTCCGAAGAG",2,0.47,NA,NA,NA,NA,NA,NA,"stop","Q79* Y119T R136C",3
"lib1","SARS-CoV-2","TTCACGGTGGGACGGC",5,189.25,10.63,-0.13,0.04,2.89,1.05,0,">1 nonsynonymous","R78N V194I",2
"lib1","SARS-CoV-2","TTCACGTAAATTGTAG",2,5.36,6,-4.76,2,1.5,1.09,0.05,">1 nonsynonymous","A14V Y123M P149S P161L",4
"lib1","SARS-CoV-2","TTCACGTATCTTACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R27T Y119P N151L P177*",4
"lib1","SARS-CoV-2","TTCACGTCTCACAATT",2,1.98,NA,NA,NA,NA,NA,NA,"stop","S41H C195*",2
"lib1","SARS-CoV-2","TTCACGTTAGTACCAT",6,73.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","N4R T148D E154Q Y175E V182S",5
"lib1","SARS-CoV-2","TTCACTAAATGATCAT",2,0.18,NA,NA,NA,NA,NA,NA,"stop","C61* R78C N107G R124Q N130M Q176M",6
"lib1","SARS-CoV-2","TTCACTAAGTGGCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26*",1
"lib1","SARS-CoV-2","TTCACTAATCAGTGGA",5,178.87,9.68,-1.09,0.06,2.7,1.07,0,">1 nonsynonymous","G166A L183V",2
"lib1","SARS-CoV-2","TTCACTACAGATCCTA",1,20.18,8.97,-1.79,0.14,2.12,1.12,0.01,">1 nonsynonymous","V77T K128M G174Q S184V",4
"lib1","SARS-CoV-2","TTCACTACAGCCATGG",1,18.74,9.87,-0.89,0.22,1.93,1.26,0.02,">1 nonsynonymous","I72T D98H",2
"lib1","SARS-CoV-2","TTCACTACATAACAGT",2,8.32,6.16,-4.6,2,1.5,1.06,0.01,">1 nonsynonymous","Y50T Q84N E186Y T201W",4
"lib1","SARS-CoV-2","TTCACTACCACACTAC",6,49.02,6.13,-4.63,0.34,1.5,1.1,0,">1 nonsynonymous","V20R G86V G196L",3
"lib1","SARS-CoV-2","TTCACTACGCGCCTTT",8,36.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76N V103W V173N",3
"lib1","SARS-CoV-2","TTCACTAGAAGACCGA",3,24.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","TTCACTATAATTTCAA",6,112.23,10.16,-0.6,0.06,2.78,1.03,0,">1 nonsynonymous","F8L L57T",2
"lib1","SARS-CoV-2","TTCACTATGATAAAAT",9,37.05,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A14T Y91Q P96F A105Q R127E",5
"lib1","SARS-CoV-2","TTCACTCAAAATGACC",3,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E P96L",2
"lib1","SARS-CoV-2","TTCACTCAGCTAGCCA",2,51.17,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","I28E I88T Q176T",3
"lib1","SARS-CoV-2","TTCACTCCAATGTTCA",1,12.8,7.67,-3.09,0.31,1.5,1.09,0.03,">1 nonsynonymous","F8T N120Q L131V G174W",4
"lib1","SARS-CoV-2","TTCACTCCACTCAGTT",3,6.02,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T85L G101R T170Y",3
"lib1","SARS-CoV-2","TTCACTCCATAGTACA",11,0.1,NA,NA,NA,NA,NA,NA,"stop","A89* R127G G152S",3
"lib1","SARS-CoV-2","TTCACTCGTCCAATGG",8,126.56,10.65,-0.12,0.05,2.94,1.05,0,"1 nonsynonymous","K48S",1
"lib1","SARS-CoV-2","TTCACTCGTCTTACCA",9,88.28,7.18,-3.58,0.22,1.5,1.07,0.01,">1 nonsynonymous","S113F Y123S S129R",3
"lib1","SARS-CoV-2","TTCACTGAAGGGACAC",7,50.67,9.79,-0.97,0.18,1.82,1.1,0.02,">1 nonsynonymous","F12R S129T",2
"lib1","SARS-CoV-2","TTCACTGGATGAGCCG",1,16.34,10.72,-0.04,0.08,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCACTTAAATAAAAT",11,144.97,9.35,-1.42,0.06,2.81,1.13,0,">1 nonsynonymous","V37R A145F",2
"lib1","SARS-CoV-2","TTCACTTACAAAAACT",3,85.12,10.43,-0.34,0.06,2.87,1,0,"1 nonsynonymous","G166N",1
"lib1","SARS-CoV-2","TTCACTTCCATCTAGG",1,16.44,7.13,-3.64,0.26,1.5,1.06,0.01,">1 nonsynonymous","D112K Y143S",2
"lib1","SARS-CoV-2","TTCACTTGACCGACCT",1,39.76,10.21,-0.55,0.06,2.91,1,0,">1 nonsynonymous","L60I C61G E141L",3
"lib1","SARS-CoV-2","TTCACTTTACTGATAT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","T3H S129* Y178T K199*",4
"lib1","SARS-CoV-2","TTCACTTTCAGACTTA",5,37.99,9.75,-1.02,0.12,2.33,1.05,0.01,"1 nonsynonymous","L38D",1
"lib1","SARS-CoV-2","TTCACTTTCTTTGAAC",1,13.92,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","I104R G146T",2
"lib1","SARS-CoV-2","TTCAGAAAAAAGCACG",1,5.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31T T63D L95Y",3
"lib1","SARS-CoV-2","TTCAGAAAAATAACTT",1,0.69,NA,NA,NA,NA,NA,NA,"stop","P82A Y143* T201E",3
"lib1","SARS-CoV-2","TTCAGAAACTTACAAT",4,1.35,NA,NA,NA,NA,NA,NA,"stop","N1* W23Q T55N S184Y",4
"lib1","SARS-CoV-2","TTCAGAAGAAGGGATG",3,52.33,10.15,-0.62,0.08,2.87,1.01,0,"1 nonsynonymous","C31L",1
"lib1","SARS-CoV-2","TTCAGAAGACAAACAA",12,128.89,6,-4.76,1.44,1.5,1.17,0.01,">1 nonsynonymous","S19T C31A S43N T55P Y123I G174F",6
"lib1","SARS-CoV-2","TTCAGAAGCATTTTCG",6,77.69,10.54,-0.23,0.05,2.92,1.02,0,">1 nonsynonymous","A81S S200C",2
"lib1","SARS-CoV-2","TTCAGAATACTTCCAA",1,21.58,9.9,-0.86,0.19,2.26,1.06,0.03,">1 nonsynonymous","T3L R27W F44I T201W",4
"lib1","SARS-CoV-2","TTCAGACCTTCTACCT",11,2.45,NA,NA,NA,NA,NA,NA,"stop","S45G K114* T140A T148S",4
"lib1","SARS-CoV-2","TTCAGACGTGAAAGTC",2,5.09,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C61M T100K V180P",3
"lib1","SARS-CoV-2","TTCAGACTTCGTATGA",3,46.69,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24S D97C Y178G",3
"lib1","SARS-CoV-2","TTCAGACTTGTAACAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K S41V V103W",3
"lib1","SARS-CoV-2","TTCAGAGACTGCGACG",11,0.61,NA,NA,NA,NA,NA,NA,"stop","F17* S113Q K128V Q168S",4
"lib1","SARS-CoV-2","TTCAGAGAGACCCACT",3,22.11,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","A42M F62H F99S G146A G196S",5
"lib1","SARS-CoV-2","TTCAGAGATGAACAGG",2,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R R27I I80R",3
"lib1","SARS-CoV-2","TTCAGAGCTAAGGATT",1,10.71,9.91,-0.85,0.18,2.55,1,0.02,">1 nonsynonymous","F47S G83N",2
"lib1","SARS-CoV-2","TTCAGAGGAGTACAGG",2,29.58,7.23,-3.54,0.34,1.5,1.07,0.04,">1 nonsynonymous","D68P Y91F S129G Q176F",4
"lib1","SARS-CoV-2","TTCAGAGGTATGGTAG",4,40.15,10.23,-0.53,0.11,2.57,1.02,0,">1 nonsynonymous","G9C A42L G83L",3
"lib1","SARS-CoV-2","TTCAGATAAGTTTGCA",11,108.06,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","Y93S P149L",2
"lib1","SARS-CoV-2","TTCAGATTAAACACCT",1,17.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P P177S",2
"lib1","SARS-CoV-2","TTCAGATTAGAACCCA",8,143.33,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V32L D68E I104L F167E G172E",5
"lib1","SARS-CoV-2","TTCAGATTATACACAA",5,43.56,10.69,-0.08,0.08,2.83,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAGATTCCACCTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56S I104T V115* D137P",4
"lib1","SARS-CoV-2","TTCAGATTCCTATCGT",4,1,NA,NA,NA,NA,NA,NA,"stop","S36* V103L Y143N V180N S200I",5
"lib1","SARS-CoV-2","TTCAGCAAAACCCTAG",2,42.82,6.52,-4.24,0.45,1.5,1.16,0.02,">1 nonsynonymous","T85S D112Y G152M",3
"lib1","SARS-CoV-2","TTCAGCACGTCAAAGC",8,31.04,8.7,-2.07,0.23,1.5,1.03,0.03,">1 nonsynonymous","P7L F8K S139L",3
"lib1","SARS-CoV-2","TTCAGCACTATCAGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35I A42N Y50E G86*",4
"lib1","SARS-CoV-2","TTCAGCAGATTATCAA",1,19.51,8.03,-2.73,0.35,1.5,1.05,0.04,">1 nonsynonymous","V20S E135S L183E",3
"lib1","SARS-CoV-2","TTCAGCAGTGTCGTAC",4,75.43,6.15,-4.61,0.67,1.5,1.15,0.01,">1 nonsynonymous","G86V F126I C150I P177G",4
"lib1","SARS-CoV-2","TTCAGCATAACTATTA",1,9.77,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C49H L60S Y119M S129M P161K",5
"lib1","SARS-CoV-2","TTCAGCCATGGTTTCG",6,0.43,NA,NA,NA,NA,NA,NA,"stop","A33L K94C N107G I138*",4
"lib1","SARS-CoV-2","TTCAGCGACCATCCTT",3,41.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N S43V D112A N157M",4
"lib1","SARS-CoV-2","TTCAGCGCATAGACAT",4,24.77,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","L38N Q84Y F99W N120K S129C S200M",6
"lib1","SARS-CoV-2","TTCAGCGCCATGCTTT",1,6.22,6.04,-4.72,2,1.5,1.22,0.03,">1 nonsynonymous","K48Q D68R G86D T148E A192T",5
"lib1","SARS-CoV-2","TTCAGCGTACTAACAA",1,19.4,6,-4.76,0.94,3,1.15,0.01,">1 nonsynonymous","F12D G86F F126T N157F",4
"lib1","SARS-CoV-2","TTCAGCTACTCCTTAG",3,47.96,9.73,-1.03,0.16,1.64,1.09,0.01,">1 nonsynonymous","F8Q S41R N64V",3
"lib1","SARS-CoV-2","TTCAGCTGAAAATAGC",6,48.24,6.02,-4.74,1.07,1.5,1.23,0.02,">1 nonsynonymous","E10H V37K F70C",3
"lib1","SARS-CoV-2","TTCAGCTTTGGTCCCC",2,0.96,NA,NA,NA,NA,NA,NA,"stop","R25M T100* T140P G166L",4
"lib1","SARS-CoV-2","TTCAGGAAACGTGATA",4,39.24,9.87,-0.9,0.13,2.29,1,0.01,">1 nonsynonymous","E10W N58T",2
"lib1","SARS-CoV-2","TTCAGGAAAGTCAATA",4,53.02,6,-4.76,2,1.5,1.21,0.05,">1 nonsynonymous","I72E E135K P177S F185C",4
"lib1","SARS-CoV-2","TTCAGGAACAGCAGCG",1,89.11,9.5,-1.26,0.09,1.96,1.11,0,">1 nonsynonymous","V37E V173S Y178L",3
"lib1","SARS-CoV-2","TTCAGGACGAACCGGC",12,3.05,NA,NA,NA,NA,NA,NA,"stop","Q84H V103*",2
"lib1","SARS-CoV-2","TTCAGGACTTTGAATT",4,43.35,9.85,-0.92,0.11,2.49,1.05,0,">1 nonsynonymous","G9P R27I D98V Q168S",4
"lib1","SARS-CoV-2","TTCAGGATATTGTCAA",1,10.42,10.58,-0.18,0.06,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAGGATTAGGCTTT",5,2.13,NA,NA,NA,NA,NA,NA,"stop","N64F Y91* A105* L162K",4
"lib1","SARS-CoV-2","TTCAGGATTCACGAAC",5,0.78,NA,NA,NA,NA,NA,NA,"stop","R27* D59R G86D I142M",4
"lib1","SARS-CoV-2","TTCAGGCAAACCGCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","R27L V52R N64L R73T G86R D98* N120L",7
"lib1","SARS-CoV-2","TTCAGGCACGGGCGGC",5,3.1,NA,NA,NA,NA,NA,NA,"stop","K56V N92* F99S E141P G174F",5
"lib1","SARS-CoV-2","TTCAGGCACTGTTCAT",5,12.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S K48G N58L I138M F156R",5
"lib1","SARS-CoV-2","TTCAGGCAGCACATTA",1,26.84,10.28,-0.49,0.06,3,1.01,0,"1 nonsynonymous","G146D",1
"lib1","SARS-CoV-2","TTCAGGGTATGTGACA",2,0.38,NA,NA,NA,NA,NA,NA,"stop","T46D Y50S K56T D97* V103P",5
"lib1","SARS-CoV-2","TTCAGGGTATTACGAT",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F F99C G116M G152N",4
"lib1","SARS-CoV-2","TTCAGGTGACTGATCA",3,63.17,10.6,-0.16,0.07,2.88,1.07,0,">1 nonsynonymous","N1V N110L",2
"lib1","SARS-CoV-2","TTCAGTACAAGACGTT",4,87.93,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F8H Y35L N92K",3
"lib1","SARS-CoV-2","TTCAGTATAGAAATAT",1,2.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179C",1
"lib1","SARS-CoV-2","TTCAGTCAAGAAGCAT",1,15.28,10.73,-0.03,0.07,2.9,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCAGTCCTGAATCAT",1,4.48,NA,NA,NA,NA,NA,NA,"stop","E10P F62* P96D",3
"lib1","SARS-CoV-2","TTCAGTCGGGAAATGT",7,3.08,NA,NA,NA,NA,NA,NA,"stop","A22S S45H D90* R179M",4
"lib1","SARS-CoV-2","TTCAGTCGTCCACTGC",4,43.5,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","A105D S139Y Y178N",3
"lib1","SARS-CoV-2","TTCAGTCTATTTACGA",6,84.34,10.37,-0.4,0.06,2.83,1,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TTCAGTCTCGACGACT",1,15.2,6,-4.76,1.87,1.5,1.17,0.01,">1 nonsynonymous","T100D N107R G116V L122W",4
"lib1","SARS-CoV-2","TTCAGTCTCTATATAT",9,166.76,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T3P C150S Y178S",3
"lib1","SARS-CoV-2","TTCAGTCTTAAGTATT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95C S113Q L122I G166S",4
"lib1","SARS-CoV-2","TTCAGTGACCACGTAT",3,71.31,10.68,-0.08,0.08,2.81,1.17,0,"1 nonsynonymous","K128P",1
"lib1","SARS-CoV-2","TTCAGTGTACCGAGCT",3,45.36,9.56,-1.2,0.09,2.05,1.08,0,"1 nonsynonymous","V103M",1
"lib1","SARS-CoV-2","TTCAGTGTTACGCGGA",11,308.32,10.36,-0.41,0.04,2.86,1.04,0,">1 nonsynonymous","A22T S41A",2
"lib1","SARS-CoV-2","TTCAGTTAACAACGCA",9,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L K48V E141L",3
"lib1","SARS-CoV-2","TTCAGTTAAGCCTAAT",2,69.79,10.57,-0.19,0.06,2.86,1.08,0,">1 nonsynonymous","S129N G155S",2
"lib1","SARS-CoV-2","TTCAGTTCTTAAAAAG",1,7.65,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","D90I R124M",2
"lib1","SARS-CoV-2","TTCAGTTGATCTTGTA",3,43.42,10.74,-0.03,0.07,2.9,1.06,0,">1 nonsynonymous","T3K R27V",2
"lib1","SARS-CoV-2","TTCAGTTTACTACAAC",4,109.43,10.17,-0.59,0.08,2.67,1,0,">1 nonsynonymous","A81T R136K",2
"lib1","SARS-CoV-2","TTCAGTTTGCTCCCTA",6,99.85,8.98,-1.78,0.11,2.02,1.16,0.01,">1 nonsynonymous","K56V N120V G155L T201L",4
"lib1","SARS-CoV-2","TTCAGTTTTTGGTAAG",2,12.88,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E10W R16T C158F G166H",4
"lib1","SARS-CoV-2","TTCATAAAAACGCGAA",9,106.77,10.41,-0.36,0.05,2.89,1.05,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","TTCATAAAGGGCATAC",1,19.2,10.59,-0.17,0.17,2.66,1.09,0.01,">1 nonsynonymous","T3F E141R",2
"lib1","SARS-CoV-2","TTCATAACCCAACTCA",4,2.86,NA,NA,NA,NA,NA,NA,"stop","T15F C61K D112Y G174M T201*",5
"lib1","SARS-CoV-2","TTCATAACCGAGATGG",4,120.76,10.66,-0.11,0.04,2.93,1.04,0,">1 nonsynonymous","N1P S43L K87T N110T",4
"lib1","SARS-CoV-2","TTCATAACGATTCCTT",2,35.48,8.28,-2.48,0.17,1.79,1.16,0.01,">1 nonsynonymous","V11C Y123M G174R",3
"lib1","SARS-CoV-2","TTCATAACTATTCGCG",6,70.54,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C150S Y175V",2
"lib1","SARS-CoV-2","TTCATAACTCGAACAA",1,49,10.78,0.01,0.08,2.91,1.05,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TTCATAAGATAAAGAC",4,92.41,8.35,-2.41,0.16,2.44,1.09,0.01,"1 nonsynonymous","N157C",1
"lib1","SARS-CoV-2","TTCATAAGATCTTTAC",3,0.39,NA,NA,NA,NA,NA,NA,"stop","I2V A33R L57I S69* D98A S139A",6
"lib1","SARS-CoV-2","TTCATAAGCAGCTATA",9,26.39,8.03,-2.73,0.49,1.5,1,0.08,">1 nonsynonymous","F12I A22K P133R V182S",4
"lib1","SARS-CoV-2","TTCATAAGGTGGCAGT",6,167.09,10.65,-0.11,0.05,2.86,1.08,0,"1 nonsynonymous","N120R",1
"lib1","SARS-CoV-2","TTCATAATTAGAAAGG",6,89.04,10.87,0.11,0.07,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATACAAAGCCCAT",6,0.66,NA,NA,NA,NA,NA,NA,"stop","N4* S43I D59W F70I G83D",5
"lib1","SARS-CoV-2","TTCATACAAGTGATCA",1,15.59,10.04,-0.73,0.14,2.35,1.04,0.01,">1 nonsynonymous","T55R T100K R136F",3
"lib1","SARS-CoV-2","TTCATACATCTGTAAA",1,9.54,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T55Y Q79K Y91G F134D G146W Q163M",6
"lib1","SARS-CoV-2","TTCATACCAAACTTGC",2,4.75,NA,NA,NA,NA,NA,NA,"stop","C6Y V37I R124P G152*",4
"lib1","SARS-CoV-2","TTCATACCTAAACCTA",1,14.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38K C61A G146L T170G",4
"lib1","SARS-CoV-2","TTCATACCTATCAACA",4,40.71,9.14,-1.62,0.35,1.5,1,0.06,">1 nonsynonymous","N64G R136P",2
"lib1","SARS-CoV-2","TTCATACGAAAGAAGG",2,38.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4F V20R G83T",3
"lib1","SARS-CoV-2","TTCATACGACCTTAAG",1,18.65,9.49,-1.28,0.25,1.64,1.17,0.03,">1 nonsynonymous","A42E D137A",2
"lib1","SARS-CoV-2","TTCATACGCCGAAAAT",9,109.83,10.22,-0.54,0.07,2.79,1.01,0,">1 nonsynonymous","N13S Y121F",2
"lib1","SARS-CoV-2","TTCATACGTAATGATA",3,1.62,NA,NA,NA,NA,NA,NA,"stop","G9R F62S K128C I142N F160* F167M Y175V",7
"lib1","SARS-CoV-2","TTCATACTAATCAATC",4,34.01,10.03,-0.73,0.11,2.59,1.03,0.01,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","TTCATACTACTAGGAT",2,1.21,NA,NA,NA,NA,NA,NA,"stop","Q144*",1
"lib1","SARS-CoV-2","TTCATACTCTACAAGG",1,81.97,10.8,0.03,0.1,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATACTGGGATTAG",9,16.18,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","C49W N92T G174N",3
"lib1","SARS-CoV-2","TTCATACTTATAAAGC",3,13.3,6.34,-4.43,0.56,1.5,1.09,0.02,">1 nonsynonymous","K56T V182H",2
"lib1","SARS-CoV-2","TTCATAGAAGACCTGA",2,22.09,6,-4.76,2,1.5,1.27,0.04,">1 nonsynonymous","F8C D98L Y175Q E186H",4
"lib1","SARS-CoV-2","TTCATAGCAATTAAAG",3,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Y Y66R",2
"lib1","SARS-CoV-2","TTCATAGGAATCCGGG",8,200.19,10.48,-0.28,0.04,2.91,1.05,0,"1 nonsynonymous","T148C",1
"lib1","SARS-CoV-2","TTCATAGGGTCGAAAG",1,12.82,8.56,-2.2,0.26,1.72,1.07,0.02,">1 nonsynonymous","D90G P161S",2
"lib1","SARS-CoV-2","TTCATAGTAGAGAGAA",4,10.33,10.87,0.11,0.13,2.73,1.19,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTCATAGTGAAGAGAA",2,26.18,10.77,0,0.12,2.89,1,0.01,"1 nonsynonymous","R16M",1
"lib1","SARS-CoV-2","TTCATAGTGACCCACG",1,4.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","TTCATAGTGCATTCAT",5,1.1,NA,NA,NA,NA,NA,NA,"stop","S43A L162*",2
"lib1","SARS-CoV-2","TTCATAGTTATCAAGA",2,34.69,9.74,-1.02,0.17,1.94,1.06,0.01,">1 nonsynonymous","N13I G83N",2
"lib1","SARS-CoV-2","TTCATATAAGGGCCCA",4,127.58,10.74,-0.02,0.06,2.87,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCATATATGTGAAGT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","P7N V37I S43V R124P T201*",5
"lib1","SARS-CoV-2","TTCATATATTGTCGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","W106K V182*",2
"lib1","SARS-CoV-2","TTCATATCCCCCGAGG",2,95.74,10.86,0.09,0.09,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATATCTTCTTTCT",1,12.94,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6Y C49S I88G Y143G F167L",5
"lib1","SARS-CoV-2","TTCATATTATCCAATG",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T N118T",2
"lib1","SARS-CoV-2","TTCATATTCCAATGTA",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I S19K L95D",3
"lib1","SARS-CoV-2","TTCATATTGCCAAGAA",8,102.92,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R25W S36H A42S L95N G146S",5
"lib1","SARS-CoV-2","TTCATCACAAATGGGA",5,19.92,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V103S F156S",2
"lib1","SARS-CoV-2","TTCATCACCTATAACA",5,58.55,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","V37C A81L G116H S139L F156L T170N",6
"lib1","SARS-CoV-2","TTCATCACTGTTTCCT",15,10.26,NA,NA,NA,NA,NA,NA,"stop","Y121* Q176H",2
"lib1","SARS-CoV-2","TTCATCATAATACATG",1,21.03,6.28,-4.48,0.63,1.5,1.1,0.03,">1 nonsynonymous","C6V A18T V103L T140S",4
"lib1","SARS-CoV-2","TTCATCATAGAACCAT",6,63.03,6.11,-4.65,0.82,1.5,1.2,0.02,">1 nonsynonymous","T63D F99A K128I",3
"lib1","SARS-CoV-2","TTCATCATCGTTCCCA",4,32.45,6,-4.76,2,3,1.12,0,">1 nonsynonymous","D59F W106I V115Y F160S G174V",5
"lib1","SARS-CoV-2","TTCATCCCGGAACATT",1,0,NA,NA,NA,NA,NA,NA,"stop","V20C C49V T85L F99* Y119V",5
"lib1","SARS-CoV-2","TTCATCCGAACCTAAT",2,61.6,10.31,-0.46,0.05,2.87,1.01,0,"1 nonsynonymous","C6N",1
"lib1","SARS-CoV-2","TTCATCCGACAATGAT",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N N107R S139A E186N",4
"lib1","SARS-CoV-2","TTCATCCGGGAGACAT",7,133.22,9.96,-0.8,0.07,2.42,1.03,0,">1 nonsynonymous","A105F T201M",2
"lib1","SARS-CoV-2","TTCATCCGGGTGACAC",2,28.46,6.64,-4.12,0.48,1.5,1.17,0.04,">1 nonsynonymous","N1M I88R I142M N151T",4
"lib1","SARS-CoV-2","TTCATCCTAAAATGTC",7,39.25,7.3,-3.47,0.32,1.5,1.1,0.04,">1 nonsynonymous","Q84H P96E E141I",3
"lib1","SARS-CoV-2","TTCATCCTCGGGTGGT",1,11.35,9.51,-1.25,0.12,2.82,1.14,0.01,">1 nonsynonymous","V20P C61M E154L",3
"lib1","SARS-CoV-2","TTCATCCTGACTCCGG",1,16.55,10.83,0.07,0.05,3,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATCGACCAATACG",3,50.81,10.14,-0.62,0.06,2.92,1.02,0,">1 nonsynonymous","K114C E154D",2
"lib1","SARS-CoV-2","TTCATCGCGCTAAAAA",8,152,10.21,-0.55,0.05,2.76,1.01,0,">1 nonsynonymous","K132C E141M",2
"lib1","SARS-CoV-2","TTCATCTATAAACACC",1,0.24,NA,NA,NA,NA,NA,NA,"stop","E10M K26M Y35* N64K N107V T201D",6
"lib1","SARS-CoV-2","TTCATCTCGAGCCACG",2,45.35,10.62,-0.15,0.04,2.98,1,0,"1 nonsynonymous","E10M",1
"lib1","SARS-CoV-2","TTCATCTTGTCAGCCT",1,28.19,10.77,0.01,0.08,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATGAAACCATATA",1,8.67,10.68,-0.09,0.09,3,1,0,">1 nonsynonymous","Y39N H189R T201H",3
"lib1","SARS-CoV-2","TTCATGAAATATGGCA",1,16.59,10.58,-0.18,0.1,2.98,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATGAAGCAAAGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","K128* G152N",2
"lib1","SARS-CoV-2","TTCATGAAGCAATGAT",11,9.45,NA,NA,NA,NA,NA,NA,"stop","G51T K56I P96H P161* T170N",5
"lib1","SARS-CoV-2","TTCATGAGCCACGATA",3,56.16,9.97,-0.8,0.08,2.52,1.09,0,">1 nonsynonymous","L5A Y39P D59V G174A",4
"lib1","SARS-CoV-2","TTCATGAGCTCTCTGC",2,38.66,9.65,-1.11,0.2,1.84,1.11,0.02,">1 nonsynonymous","N64L D90I",2
"lib1","SARS-CoV-2","TTCATGCACTTAGTTA",3,23.29,6.04,-4.72,1.03,1.5,1.16,0.02,">1 nonsynonymous","T3K A81P N120I",3
"lib1","SARS-CoV-2","TTCATGCCCATACTGT",3,77.21,8.73,-2.04,0.15,1.5,1.14,0.01,">1 nonsynonymous","L60R N107I",2
"lib1","SARS-CoV-2","TTCATGCCCGTGCTAT",3,64.75,9.37,-1.4,0.06,2.74,1.15,0,">1 nonsynonymous","T148V F156C S200G",3
"lib1","SARS-CoV-2","TTCATGCCGGATAGAA",1,5.27,10.65,-0.11,0.16,2.81,1.17,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TTCATGCGAAATCGTA",4,99.51,6.52,-4.25,0.37,1.5,1.12,0.01,">1 nonsynonymous","E10N G146D T170V",3
"lib1","SARS-CoV-2","TTCATGCGAATAATTC",4,37.38,10.49,-0.27,0.08,2.86,1,0,">1 nonsynonymous","D59M D90K",2
"lib1","SARS-CoV-2","TTCATGCGACCCCAGC",2,178.93,8.33,-2.44,0.12,2.79,1.07,0.01,">1 nonsynonymous","R16W Y175S",2
"lib1","SARS-CoV-2","TTCATGCTCATACCGT",7,54.77,7.76,-3.01,0.46,1.5,1,0.06,">1 nonsynonymous","R25M A33S A105T Y121D",4
"lib1","SARS-CoV-2","TTCATGCTGGTAGCAA",1,38.42,10.08,-0.68,0.13,2.33,1.03,0.01,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","TTCATGCTTCCCCATT",1,59.57,10.07,-0.7,0.1,2.68,1.05,0,">1 nonsynonymous","G9C T55S I142Y",3
"lib1","SARS-CoV-2","TTCATGGAAACGCCAG",3,48.56,10.24,-0.52,0.08,2.85,1,0,">1 nonsynonymous","G83S L162V",2
"lib1","SARS-CoV-2","TTCATGGAAACTTTCT",1,86.97,10.29,-0.47,0.06,2.71,1.02,0,">1 nonsynonymous","V103I I142F E154R",3
"lib1","SARS-CoV-2","TTCATGGAAAGCTCTT",3,11.89,7.82,-2.94,0.3,1.83,1.21,0.05,">1 nonsynonymous","N1S R78L N92V",3
"lib1","SARS-CoV-2","TTCATGGCGAATGACT",1,22.07,10.62,-0.14,0.03,2.94,1.04,0,">1 nonsynonymous","R16V T63I",2
"lib1","SARS-CoV-2","TTCATGGTGATTAATC",4,134.17,10.58,-0.19,0.04,2.89,1.01,0,"1 nonsynonymous","Y178V",1
"lib1","SARS-CoV-2","TTCATGGTTGCGCCTC",5,26.37,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","T55E F99Y I104K",3
"lib1","SARS-CoV-2","TTCATGTCACAGTATA",2,7.03,9.97,-0.79,0.19,2.26,1.02,0.01,">1 nonsynonymous","N13A A22L",2
"lib1","SARS-CoV-2","TTCATGTCCATTTGAT",1,25.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L Y50L Y91V S200F",4
"lib1","SARS-CoV-2","TTCATGTTCACCGATT",2,29.31,6,-4.76,2,3,1.11,0,">1 nonsynonymous","I28V P96H S129V A145P L162Q",5
"lib1","SARS-CoV-2","TTCATTAAGGATCCTG",1,8.56,7.11,-3.65,0.28,1.55,1.05,0.01,"1 nonsynonymous","R124T",1
"lib1","SARS-CoV-2","TTCATTAATAGACGAA",2,69.45,8.36,-2.41,0.1,2.86,1.11,0,"1 nonsynonymous","F126E",1
"lib1","SARS-CoV-2","TTCATTACTCAAAAAG",3,15.5,8.95,-1.81,0.16,2.46,1.12,0.01,">1 nonsynonymous","N40T S41A T170L",3
"lib1","SARS-CoV-2","TTCATTAGCAGAATTC",1,31.4,10.76,0,0.09,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATTATCAGCACGT",10,126.82,6.4,-4.36,0.48,1.5,1.21,0.02,">1 nonsynonymous","F70G G86S",2
"lib1","SARS-CoV-2","TTCATTATGGACGTAG",2,31.15,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","N4I S36Y Q84S P96D L122Q D137V",6
"lib1","SARS-CoV-2","TTCATTCAACACGTTC",3,59.03,10.7,-0.06,0.08,2.83,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCATTCCAGCGGAAC",2,18.83,9.5,-1.27,0.34,1.5,1,0.07,"1 nonsynonymous","Y93M",1
"lib1","SARS-CoV-2","TTCATTCCCCTATTGG",1,7.64,10.21,-0.56,0.38,1.97,1,0.02,">1 nonsynonymous","T3V P96C",2
"lib1","SARS-CoV-2","TTCATTCCGTCTACGA",2,11.2,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","K48G L95D V103C G196Q T201L",5
"lib1","SARS-CoV-2","TTCATTCCTAATGCAT",8,125.9,10.31,-0.46,0.03,2.85,1.04,0,"1 nonsynonymous","G146W",1
"lib1","SARS-CoV-2","TTCATTCTGATGTAAA",2,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E S139V V173S",3
"lib1","SARS-CoV-2","TTCATTCTTGGCCACT",4,82.8,6,-4.76,0.64,1.5,1.11,0,">1 nonsynonymous","L5S L38T S43T Q84Y F99I C158V Y178T",7
"lib1","SARS-CoV-2","TTCATTGAAAGCCAAA",1,16.14,10.62,-0.15,0.07,2.95,1.02,0,">1 nonsynonymous","V37A C61M S129R T201L",4
"lib1","SARS-CoV-2","TTCATTGAACCATTCA",9,107.05,8.75,-2.02,0.1,2.55,1.13,0,">1 nonsynonymous","L57Q T170H K199R",3
"lib1","SARS-CoV-2","TTCATTGAAGGTACTT",2,9.46,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","Y50H L57W F62S D90N I104L T148F",6
"lib1","SARS-CoV-2","TTCATTGAAGTGGAAA",3,9.91,NA,NA,NA,NA,NA,NA,"stop","N4R A33* S43P",3
"lib1","SARS-CoV-2","TTCATTGAGAGGTTGG",3,20.8,10.17,-0.6,0.16,2.78,1.01,0,">1 nonsynonymous","K26A S36F",2
"lib1","SARS-CoV-2","TTCATTGGCACGGGAT",2,16.41,8.83,-1.93,0.15,2.95,1.02,0.01,">1 nonsynonymous","Q84Y Y119T K199Q",3
"lib1","SARS-CoV-2","TTCATTGGCGTCTCCG",4,67.15,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G51Y K94S P149I",3
"lib1","SARS-CoV-2","TTCATTTAGTGGATAA",9,186.65,10.45,-0.31,0.03,2.93,1.01,0,"1 nonsynonymous","F44P",1
"lib1","SARS-CoV-2","TTCATTTGAAACTATA",15,4.92,NA,NA,NA,NA,NA,NA,"stop","A33* P191F G196L",3
"lib1","SARS-CoV-2","TTCATTTGCTCCTTTA",3,21.89,6.97,-3.79,0.35,1.5,1.04,0.04,">1 nonsynonymous","C158R F167V",2
"lib1","SARS-CoV-2","TTCATTTTCCTAGTGT",1,38.93,6,-4.76,1.23,2.03,1.1,0.01,">1 nonsynonymous","A18S K48Y T63S S113M R124I I142K",6
"lib1","SARS-CoV-2","TTCATTTTCTGTAGAG",1,27.35,10.7,-0.07,0.09,2.86,1.04,0,"1 nonsynonymous","K114L",1
"lib1","SARS-CoV-2","TTCCAAAAAGCGTGAG",5,46.63,9.18,-1.58,0.18,1.83,1.11,0.01,">1 nonsynonymous","S41P D98C S164F",3
"lib1","SARS-CoV-2","TTCCAAAAAGCTGACA",1,14.2,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","C61L T100D A105Q",3
"lib1","SARS-CoV-2","TTCCAAAAATATTTTC",4,0.4,NA,NA,NA,NA,NA,NA,"stop","V37D C49R Y175*",3
"lib1","SARS-CoV-2","TTCCAAAAATGGCAAA",9,402.6,8.09,-2.67,0.13,1.86,1.1,0.01,">1 nonsynonymous","N13R T55H Y175M",3
"lib1","SARS-CoV-2","TTCCAAAATAATAACC",6,72.85,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L131C P149I C158S",3
"lib1","SARS-CoV-2","TTCCAAAATATTGTCA",7,62112.71,10.12,-0.64,0.04,2.95,1,0,">1 nonsynonymous","D59N F156S",2
"lib1","SARS-CoV-2","TTCCAAACAAGTGGCC",6,89.49,10.71,-0.05,0.05,2.87,1.09,0,"1 nonsynonymous","S200F",1
"lib1","SARS-CoV-2","TTCCAAAGAAACAGAG",7,0.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAAAGGGCTAAGG",4,13.91,10.65,-0.11,0.07,2.89,1.03,0,">1 nonsynonymous","L60F V173D",2
"lib1","SARS-CoV-2","TTCCAAATAACGCAGT",3,55.14,10.83,0.06,0.09,2.86,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAAATAGAGTACT",6,76,10.64,-0.12,0.05,2.93,1.05,0,">1 nonsynonymous","L111K P149S",2
"lib1","SARS-CoV-2","TTCCAAATCCATAAGC",2,61.66,10.65,-0.11,0.08,2.84,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAAATCCTGAACT",1,38.9,6,-4.76,1.34,1.5,1.17,0.02,">1 nonsynonymous","N64L K87C D98F S113K",4
"lib1","SARS-CoV-2","TTCCAAATGCATACCA",6,105.48,10.63,-0.13,0.04,2.86,1.06,0,"1 nonsynonymous","S53M",1
"lib1","SARS-CoV-2","TTCCAAATGCTGCTCA",3,66.39,9.94,-0.83,0.12,2.58,1.09,0.01,">1 nonsynonymous","T3G Y121K",2
"lib1","SARS-CoV-2","TTCCAAATTCCAATAA",1,12.85,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D59A Y93F G101D L131S",4
"lib1","SARS-CoV-2","TTCCAACAATTTAGAA",3,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E C158D",2
"lib1","SARS-CoV-2","TTCCAACACCGCCATA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","P7E Y35*",2
"lib1","SARS-CoV-2","TTCCAACACTGTACCA",9,123.01,7.17,-3.59,0.29,1.5,1.18,0.02,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","TTCCAACCGTGTATAA",5,43.65,6,-4.76,1.6,1.5,1.19,0.02,">1 nonsynonymous","S19Q D68E",2
"lib1","SARS-CoV-2","TTCCAACGACAAGTAA",1,79.15,8.57,-2.19,0.13,2.32,1.09,0.01,">1 nonsynonymous","E10F K87L D97A P169Q",4
"lib1","SARS-CoV-2","TTCCAACTATTATCAA",12,178.74,10.24,-0.52,0.05,2.82,1.02,0,">1 nonsynonymous","F62D D97N",2
"lib1","SARS-CoV-2","TTCCAACTCTATACTT",2,6.42,8.83,-1.93,0.23,1.75,1.11,0.01,">1 nonsynonymous","G9V K94Y",2
"lib1","SARS-CoV-2","TTCCAACTGGAACCAT",2,13.91,10.75,-0.02,0.09,3,1,0,"1 nonsynonymous","G83Q",1
"lib1","SARS-CoV-2","TTCCAACTGTATACCA",1,12.61,6,-4.76,2,1.5,1.29,0.06,">1 nonsynonymous","E10V V37L D59S K87G R124H F156R",6
"lib1","SARS-CoV-2","TTCCAACTTAAGGAAA",2,64.49,9.91,-0.86,0.1,2.44,1.07,0,">1 nonsynonymous","C6R T15E G116S Q168Y",4
"lib1","SARS-CoV-2","TTCCAAGCGGTATTTA",5,34.84,7.47,-3.29,0.28,1.5,1.2,0.02,">1 nonsynonymous","C61Y L95T F99N",3
"lib1","SARS-CoV-2","TTCCAAGCTAAAATAC",5,35.82,10.78,0.01,0.08,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAAGCTGGACCAA",3,41.37,10.02,-0.74,0.1,2.77,1.02,0,">1 nonsynonymous","T63D Y91F N107A",3
"lib1","SARS-CoV-2","TTCCAAGGAGAAGACT",2,29.14,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","F167C",1
"lib1","SARS-CoV-2","TTCCAAGGCAAAAACA",8,501.74,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2K F8Y Y35A C158T V173F",5
"lib1","SARS-CoV-2","TTCCAAGTTTCTAACC",5,86.61,9.99,-0.77,0.09,2.46,1.07,0,">1 nonsynonymous","P96T K114V",2
"lib1","SARS-CoV-2","TTCCAATAAATAATAT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","D112A S129*",2
"lib1","SARS-CoV-2","TTCCAATCCTAGAGCC",2,14.41,10.04,-0.72,0.13,1.8,1.01,0.01,">1 nonsynonymous","A14V F134K",2
"lib1","SARS-CoV-2","TTCCAATTTAACCAAA",2,30.29,9.32,-1.45,0.09,2.67,1.19,0,">1 nonsynonymous","L60D N110I F156T",3
"lib1","SARS-CoV-2","TTCCACAACAGTTACT",2,8.65,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C31G I88G W106R",3
"lib1","SARS-CoV-2","TTCCACAATAATTAAG",5,52.02,9.99,-0.78,0.11,2.44,1.05,0.01,">1 nonsynonymous","P82A P197A",2
"lib1","SARS-CoV-2","TTCCACAATAGGTAGG",4,28.82,9.11,-1.66,0.26,1.72,1.17,0.04,">1 nonsynonymous","V77S S200L",2
"lib1","SARS-CoV-2","TTCCACAATCAATGTT",3,123.3,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N13D P161L",2
"lib1","SARS-CoV-2","TTCCACAATGCAGGCA",1,8.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50I I80G F156G P197S",4
"lib1","SARS-CoV-2","TTCCACACTGCAATAA",4,93.6,10.52,-0.24,0.05,2.96,1,0,">1 nonsynonymous","K87A D97R",2
"lib1","SARS-CoV-2","TTCCACAGATAGCTGG",5,19.35,10.63,-0.13,0.06,2.88,1.11,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","TTCCACCAAAATTTTC",2,25.25,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37I L57R P96I",3
"lib1","SARS-CoV-2","TTCCACCAGCATCCCT",7,71.67,10.26,-0.51,0.07,2.78,1,0,">1 nonsynonymous","I2L S45F",2
"lib1","SARS-CoV-2","TTCCACCCAAGCTAGT",1,6.89,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","N4M C49E F134S",3
"lib1","SARS-CoV-2","TTCCACCCAGACCGAC",4,114.07,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8G V37P R179T",3
"lib1","SARS-CoV-2","TTCCACCCTCAGCGTG",4,87.53,10.14,-0.63,0.07,2.62,1.03,0,">1 nonsynonymous","K56D K128E P133T",3
"lib1","SARS-CoV-2","TTCCACCCTTAACGGT",6,13.44,6,-4.76,2,1.5,1.42,0.05,">1 nonsynonymous","Y21H F167D",2
"lib1","SARS-CoV-2","TTCCACCGTCCATCAG",7,32.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F70C A145S",2
"lib1","SARS-CoV-2","TTCCACCTGTTCAACG",1,0.59,NA,NA,NA,NA,NA,NA,"stop","T15* K87S Y119C",3
"lib1","SARS-CoV-2","TTCCACGACAGCATAC",7,101.12,8.35,-2.42,0.11,2.36,1.07,0,">1 nonsynonymous","S36L R73G G196S",3
"lib1","SARS-CoV-2","TTCCACGTACATGTAT",1,22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T100S T140A F156H P177Y",4
"lib1","SARS-CoV-2","TTCCACGTACTGACAT",4,0,NA,NA,NA,NA,NA,NA,"stop","N157* T201D",2
"lib1","SARS-CoV-2","TTCCACGTTTTCCAAA",4,45.67,8.45,-2.31,0.16,2.03,1.11,0.01,">1 nonsynonymous","D112L Y123R S200A",3
"lib1","SARS-CoV-2","TTCCACTATTGTCCCG",5,27.54,6.67,-4.09,0.4,1.5,1.12,0.02,">1 nonsynonymous","T15Q G51H R124S",3
"lib1","SARS-CoV-2","TTCCACTCAGAACGGA",2,27.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49H",1
"lib1","SARS-CoV-2","TTCCACTGTAATGTAA",5,40.91,9.53,-1.24,0.14,2.3,1.09,0.01,">1 nonsynonymous","I2V A89V E154G",3
"lib1","SARS-CoV-2","TTCCACTTCATACTAA",11,103.53,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9S L38K A42T Y66R D90I",5
"lib1","SARS-CoV-2","TTCCACTTGTGAGAAA",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106D P133K Q168T",3
"lib1","SARS-CoV-2","TTCCAGAAAACACTTG",4,66.77,10.68,-0.08,0.06,2.94,1.01,0,"1 nonsynonymous","L60C",1
"lib1","SARS-CoV-2","TTCCAGAAAGAGATAG",3,7.79,10.62,-0.14,0.17,2.86,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAGAAAGCGTATT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F D112V S129C G146Y",4
"lib1","SARS-CoV-2","TTCCAGAAAGCTCCCA",2,61.83,10.81,0.05,0.06,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCAGAAAGTCGAAT",1,24.2,10.47,-0.29,0.09,2.74,1.24,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TTCCAGAGAGAACAAC",2,14.98,8.32,-2.44,0.19,1.5,1.01,0.01,">1 nonsynonymous","I88L L122Q G155V",3
"lib1","SARS-CoV-2","TTCCAGAGATTCCCCA",4,29.83,10.31,-0.45,0.23,1.5,1,0.02,">1 nonsynonymous","N58D I104A D112V",3
"lib1","SARS-CoV-2","TTCCAGATAATTCATA",6,28.81,9.16,-1.61,0.21,1.5,1.05,0.02,">1 nonsynonymous","A33L S41K D59S P96T P149L",5
"lib1","SARS-CoV-2","TTCCAGATGCGTGTGG",2,34.55,10.71,-0.06,0.12,2.69,1.09,0.01,"1 nonsynonymous","A33L",1
"lib1","SARS-CoV-2","TTCCAGATGTCTATTG",3,24.41,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","K48H A81L G117L N130L",4
"lib1","SARS-CoV-2","TTCCAGATTAAAACAA",3,19.97,7.45,-3.31,0.24,2,1.12,0.03,">1 nonsynonymous","C61W I104L G116V G146T",4
"lib1","SARS-CoV-2","TTCCAGATTCGATAGA",3,0.11,NA,NA,NA,NA,NA,NA,"stop","T63G D90A L122* R127M",4
"lib1","SARS-CoV-2","TTCCAGCCACCAACGT",9,73.66,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A42W G83I Y91G W106C",4
"lib1","SARS-CoV-2","TTCCAGCTCAAATCAA",2,60.01,7.61,-3.15,0.25,1.5,1.12,0.02,">1 nonsynonymous","C6I S139F",2
"lib1","SARS-CoV-2","TTCCAGGTAATCAAAG",14,131.54,10.52,-0.24,0.04,2.93,1.01,0,">1 nonsynonymous","F62M D98G",2
"lib1","SARS-CoV-2","TTCCAGGTCCAGACCT",3,14.83,10.68,-0.09,0.05,2.98,1.01,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCCAGTCTTGGCATC",3,35.57,7.81,-2.96,0.38,1.5,1.11,0.05,">1 nonsynonymous","F12S L183C",2
"lib1","SARS-CoV-2","TTCCAGTCTTTATGTT",3,96.38,8.74,-2.03,0.1,1.77,1.1,0.01,">1 nonsynonymous","D97Y Q176R",2
"lib1","SARS-CoV-2","TTCCAGTGTCATATCA",1,29.45,10.67,-0.1,0.07,2.92,1,0,">1 nonsynonymous","N13H S129N V153Q",3
"lib1","SARS-CoV-2","TTCCATAAAGACCAAC",2,8.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5W N120E P133H T148I C158G T201S",6
"lib1","SARS-CoV-2","TTCCATAAATTATAAA",1,47.47,10.61,-0.15,0.05,2.87,1.03,0,"1 nonsynonymous","G9V",1
"lib1","SARS-CoV-2","TTCCATAACACAATCG",6,101.1,10.73,-0.04,0.04,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCATAACCACAACT",4,58.44,9.94,-0.82,0.06,2.88,1.01,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","TTCCATAACGATAGAC",3,17.34,10.44,-0.32,0.06,2.83,1.04,0,">1 nonsynonymous","T15R Q84S D97P",3
"lib1","SARS-CoV-2","TTCCATAAGAAATGAA",1,6.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8H",1
"lib1","SARS-CoV-2","TTCCATAATGACCAAT",7,2.01,NA,NA,NA,NA,NA,NA,"stop","S53V K94S T100D L111N Y119*",5
"lib1","SARS-CoV-2","TTCCATAATGGGGCAT",5,173.35,9.32,-1.44,0.07,2.83,1.1,0,"1 nonsynonymous","Q168I",1
"lib1","SARS-CoV-2","TTCCATAATTTAATGA",1,12.81,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","K128H V181D",2
"lib1","SARS-CoV-2","TTCCATAGGCCTGAGA",3,59.56,8,-2.77,0.14,1.5,1.11,0.01,">1 nonsynonymous","G152F Q176L",2
"lib1","SARS-CoV-2","TTCCATATTTATGTTG",3,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M N58G V103R",3
"lib1","SARS-CoV-2","TTCCATCTCTTAAATC",3,31.29,9.39,-1.37,0.2,1.7,1.17,0.02,">1 nonsynonymous","T46G Y66Q",2
"lib1","SARS-CoV-2","TTCCATGAACGCTCTA",3,82.75,9.31,-1.46,0.17,1.61,1.12,0.01,">1 nonsynonymous","L38T S139R T148S",3
"lib1","SARS-CoV-2","TTCCATGCAAGCTATA",6,119.97,10.47,-0.29,0.05,2.91,1.04,0,">1 nonsynonymous","L122K K128L F156K",3
"lib1","SARS-CoV-2","TTCCATGCAATTGTCC",6,34.75,6.01,-4.76,1.1,1.5,1.21,0.03,">1 nonsynonymous","V181G T201S",2
"lib1","SARS-CoV-2","TTCCATGCAGTTCGGT",8,157.42,10.51,-0.25,0.05,2.93,1,0,">1 nonsynonymous","S53T G83E",2
"lib1","SARS-CoV-2","TTCCATGGCATAGTTG",4,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P T55F F156S",3
"lib1","SARS-CoV-2","TTCCATGGGTACGGGT",2,5.54,6,-4.76,2,3,1.03,0,">1 nonsynonymous","N64M S69R W106S Y121F A145Q",5
"lib1","SARS-CoV-2","TTCCATGTACGGGTAG",2,19.45,7.72,-3.04,0.4,1.5,1.06,0.06,">1 nonsynonymous","A81E G101C",2
"lib1","SARS-CoV-2","TTCCATGTTGAATAGT",6,1.25,NA,NA,NA,NA,NA,NA,"stop","P7L L38R S43F Y50C G86Y G101H F126G P161I S200*",9
"lib1","SARS-CoV-2","TTCCATTCATATAAAT",10,127.34,10.49,-0.28,0.05,2.91,1.03,0,"1 nonsynonymous","T85P",1
"lib1","SARS-CoV-2","TTCCATTCGTTAGCGG",1,8,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L60P Y143K",2
"lib1","SARS-CoV-2","TTCCATTCTGGAATGT",1,31.53,8.21,-2.55,0.15,2.56,1.06,0.01,">1 nonsynonymous","C61K S113L",2
"lib1","SARS-CoV-2","TTCCCAAAAAGATTAT",2,6.29,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","S45T K94V R127P T170L E186S",5
"lib1","SARS-CoV-2","TTCCCAAAACAGTGGA",3,48.34,10.7,-0.06,0.04,2.95,1.02,0,">1 nonsynonymous","V32E S43N",2
"lib1","SARS-CoV-2","TTCCCAAACTGCCCTT",4,27.85,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F12I K48L G101V N110G R136H F160S",6
"lib1","SARS-CoV-2","TTCCCAAAGTAGCGAC",2,3.45,NA,NA,NA,NA,NA,NA,"stop","S41R Q84H Y175*",3
"lib1","SARS-CoV-2","TTCCCAAATCACTTAT",2,62.56,8.87,-1.9,0.13,2.68,1.15,0.01,">1 nonsynonymous","Y121M T170R T201R",3
"lib1","SARS-CoV-2","TTCCCAACCGAATCTA",4,82.5,10.05,-0.72,0.06,2.61,1,0,"1 nonsynonymous","P133M",1
"lib1","SARS-CoV-2","TTCCCAACCTAAAACA",1,15.1,6,-4.76,2,3,1.11,0.01,">1 nonsynonymous","F8V S43W T63S V77L G86T S108I F134N",7
"lib1","SARS-CoV-2","TTCCCAAGAAGGCCTT",1,40.01,7.74,-3.02,0.19,1.9,1.16,0.01,">1 nonsynonymous","A22F T55L N157T",3
"lib1","SARS-CoV-2","TTCCCAATAATGGAAC",1,1.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56G",1
"lib1","SARS-CoV-2","TTCCCACCAAGACACT",1,31.37,10.17,-0.6,0.1,2.63,1.08,0.01,">1 nonsynonymous","G116R F134M",2
"lib1","SARS-CoV-2","TTCCCACCCATGCAGC",4,71.1,10.71,-0.05,0.06,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCCACGCGGAACAA",2,53.79,10.57,-0.2,0.04,2.87,1.04,0,"1 nonsynonymous","F185Y",1
"lib1","SARS-CoV-2","TTCCCACGTGGGGCTG",3,67.1,10.27,-0.5,0.05,2.87,1,0,">1 nonsynonymous","F47R P197T",2
"lib1","SARS-CoV-2","TTCCCACTTCCCTATG",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L V182E",2
"lib1","SARS-CoV-2","TTCCCAGGGGATAGCC",3,44.96,10.66,-0.1,0.08,2.88,1.04,0,"1 nonsynonymous","Y123W",1
"lib1","SARS-CoV-2","TTCCCAGTCAGCAACC",1,9.28,9.99,-0.78,0.18,1.71,1.07,0.01,">1 nonsynonymous","N13W D90H",2
"lib1","SARS-CoV-2","TTCCCATCGTCCTCCA",1,5.4,6,-4.76,2,1.5,1.1,0.04,">1 nonsynonymous","G9N I28R C61I F99C",4
"lib1","SARS-CoV-2","TTCCCATGCAATGCAC",1,44.32,9.46,-1.31,0.23,1.54,1.14,0.03,">1 nonsynonymous","N64M S69L",2
"lib1","SARS-CoV-2","TTCCCATTGCCGGCAA",2,19.26,9.15,-1.62,0.27,1.6,1.24,0.04,">1 nonsynonymous","Y121H V180A",2
"lib1","SARS-CoV-2","TTCCCCAAACCGTTTT",2,48.65,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N24F K132C C150Y",3
"lib1","SARS-CoV-2","TTCCCCAATACGTAGA",2,93.86,10.93,0.17,0.1,2.85,1.03,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","TTCCCCACGGCGGCGG",1,7.87,7.01,-3.76,0.36,2.04,1.29,0.03,">1 nonsynonymous","A42V D90V G152T",3
"lib1","SARS-CoV-2","TTCCCCACTTAACTTC",5,95.31,8.56,-2.2,0.23,1.5,1.14,0.02,">1 nonsynonymous","Y39H F44R Y50H",3
"lib1","SARS-CoV-2","TTCCCCAGAGATGCCT",7,164.09,10.43,-0.33,0.05,2.91,1.02,0,">1 nonsynonymous","N4S F12L",2
"lib1","SARS-CoV-2","TTCCCCATCGGGGATA",1,9.76,10.76,0,0.21,3,1.01,0.01,"1 nonsynonymous","N151T",1
"lib1","SARS-CoV-2","TTCCCCCAAAGTCGGC",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T G83V I88S K132S I142A P149M F185N",7
"lib1","SARS-CoV-2","TTCCCCCAATTACAAG",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S S29G C102Q",3
"lib1","SARS-CoV-2","TTCCCCCCAAAGTTCT",1,20.8,10.71,-0.05,0.09,2.81,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCCCCGGCAGCAAT",3,32.38,6,-4.76,1.18,1.5,1.2,0.02,">1 nonsynonymous","S41T A81F G117V",3
"lib1","SARS-CoV-2","TTCCCCGAAACATGAC",9,5.37,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","L95S",1
"lib1","SARS-CoV-2","TTCCCCGACCATCCGG",2,114.98,10.79,0.02,0.05,2.92,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCCCGGAGAAAACT",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E P54A I88L",3
"lib1","SARS-CoV-2","TTCCCCGGCCTAGAGA",3,53.28,10.31,-0.45,0.03,2.81,1.06,0,">1 nonsynonymous","N13S S41A",2
"lib1","SARS-CoV-2","TTCCCCGGTATCATAG",7,115.72,10.32,-0.45,0.04,2.95,1,0,">1 nonsynonymous","A18Q C61G",2
"lib1","SARS-CoV-2","TTCCCCGGTCCGGCGT",2,33.64,10.89,0.12,0.08,2.96,1.03,0,"1 nonsynonymous","P197R",1
"lib1","SARS-CoV-2","TTCCCCTCAGCTACAT",1,12,6,-4.76,2,1.5,1.02,0.01,">1 nonsynonymous","R25P Y121T",2
"lib1","SARS-CoV-2","TTCCCCTCTTTTTCTA",4,40.74,8.63,-2.13,0.26,1.5,1.12,0.02,">1 nonsynonymous","Y39E P54L A89I G146A",4
"lib1","SARS-CoV-2","TTCCCCTGAAAGTATT",7,104.03,10.69,-0.08,0.05,2.92,1.04,0,"1 nonsynonymous","D97T",1
"lib1","SARS-CoV-2","TTCCCGAAGCGAAATG",5,7.47,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T85L G101S A190R",3
"lib1","SARS-CoV-2","TTCCCGAAGTAATTGC",4,19.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9K N40L F134I",3
"lib1","SARS-CoV-2","TTCCCGACATGTCGAC",4,44.71,10.69,-0.07,0.08,2.85,1.09,0,"1 nonsynonymous","T63R",1
"lib1","SARS-CoV-2","TTCCCGACCATAGGAA",2,9,6,-4.76,2,1.5,1.15,0.05,">1 nonsynonymous","Y91D Y159T",2
"lib1","SARS-CoV-2","TTCCCGAGAGTGATTC",2,23.28,7.05,-3.72,0.36,1.5,1.08,0.03,">1 nonsynonymous","C61V Y93S T148R",3
"lib1","SARS-CoV-2","TTCCCGATTGAAGTGA",3,3.51,NA,NA,NA,NA,NA,NA,"stop","P7E V71Q K87* A105L C150I Y165S",6
"lib1","SARS-CoV-2","TTCCCGCACCTACGAC",5,31.46,6,-4.76,1.99,1.5,1.23,0.04,">1 nonsynonymous","A14K C31Y V37G L60G A81P W106L",6
"lib1","SARS-CoV-2","TTCCCGCCTAAATATT",5,84.65,10.17,-0.59,0.07,2.79,1.01,0,"1 nonsynonymous","Y35D",1
"lib1","SARS-CoV-2","TTCCCGCTCATCTTTC",8,121.82,10.71,-0.05,0.05,2.92,1.05,0,">1 nonsynonymous","F62A T85N",2
"lib1","SARS-CoV-2","TTCCCGGACGCAGGCC",3,19.98,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","T85K P161M F167G L183P",4
"lib1","SARS-CoV-2","TTCCCGGCCAAATCAT",4,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G G101D",2
"lib1","SARS-CoV-2","TTCCCGGGATGTGCAT",7,57.82,6,-4.76,1.48,1.5,1.17,0.01,">1 nonsynonymous","I80K D98T Y123L G155S",4
"lib1","SARS-CoV-2","TTCCCTAAACTATAAA",1,11.94,10.89,0.13,0.07,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCCTAAATCTTCGA",1,17.95,6.76,-4.01,0.38,2.21,1.13,0.02,">1 nonsynonymous","R27G K56M P96Q V173A",4
"lib1","SARS-CoV-2","TTCCCTATAAACCCTG",2,15.83,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","A14I A33H V180F",3
"lib1","SARS-CoV-2","TTCCCTCACCACCGGC",4,19.65,8.47,-2.29,0.28,1.68,1.07,0.03,">1 nonsynonymous","N58S N107L T201S",3
"lib1","SARS-CoV-2","TTCCCTCCGAGATGGA",1,96.64,10.2,-0.57,0.03,2.9,1.02,0,">1 nonsynonymous","A14L K87V",2
"lib1","SARS-CoV-2","TTCCCTCTCTTAAGAC",6,25,7.11,-3.65,0.34,1.5,1.22,0.03,">1 nonsynonymous","P96M N120F",2
"lib1","SARS-CoV-2","TTCCCTGAAGTTCCAC",2,19.85,10.07,-0.69,0.16,2.12,1.02,0.01,">1 nonsynonymous","I28W V52Y T63S S139I",4
"lib1","SARS-CoV-2","TTCCCTGAGCATTGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D90* P177R F185M",3
"lib1","SARS-CoV-2","TTCCCTTAAGGCGCTC",2,65.6,10.48,-0.29,0.05,2.95,1,0,">1 nonsynonymous","K26I C61W",2
"lib1","SARS-CoV-2","TTCCCTTAGAATCCAC",3,59.85,9.92,-0.84,0.12,2.48,1.07,0,"1 nonsynonymous","A105F",1
"lib1","SARS-CoV-2","TTCCCTTATCCAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","P82I L122* S129G R136N",4
"lib1","SARS-CoV-2","TTCCCTTCAATTTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14I K56T F70M P133* F156T",5
"lib1","SARS-CoV-2","TTCCCTTCACCGTCAA",8,59.97,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I2N G9K Q84E C102S",4
"lib1","SARS-CoV-2","TTCCCTTCACTTCGAC",4,11.81,6,-4.76,2,1.5,1.09,0.03,"1 nonsynonymous","C102G",1
"lib1","SARS-CoV-2","TTCCCTTGCTAAACCA",3,141.12,8.95,-1.81,0.15,1.64,1.16,0.01,">1 nonsynonymous","C6L L57Q",2
"lib1","SARS-CoV-2","TTCCCTTTCATAGGTA",2,50.52,6,-4.76,2,1.5,1.32,0.06,">1 nonsynonymous","P7M S41L L162I P177Q S184G",5
"lib1","SARS-CoV-2","TTCCGAAAAAATCCGA",5,39.28,10.38,-0.38,0.05,2.93,1.01,0,">1 nonsynonymous","S41M K87I",2
"lib1","SARS-CoV-2","TTCCGAAAAATTTGCA",4,68.03,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","T3L V32D D68M",3
"lib1","SARS-CoV-2","TTCCGAAATAAATTGG",1,77.04,6,-4.76,2,3,1.22,0,">1 nonsynonymous","C6S A105L",2
"lib1","SARS-CoV-2","TTCCGAAATTCCACTT",4,91.52,10.37,-0.4,0.04,2.92,1.01,0,">1 nonsynonymous","A33T C61I",2
"lib1","SARS-CoV-2","TTCCGAACACTTGGGA",1,18.67,11.01,0.25,0.12,2.9,1,0,"1 nonsynonymous","L187M",1
"lib1","SARS-CoV-2","TTCCGAACCCAAATCC",2,17.36,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","S45T K56N S113W L131S",4
"lib1","SARS-CoV-2","TTCCGAACCCACAAAC",3,20,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","A89W",1
"lib1","SARS-CoV-2","TTCCGAAGATCACTTA",21,369.98,10.74,-0.02,0.04,2.91,1.05,0,"1 nonsynonymous","T15S",1
"lib1","SARS-CoV-2","TTCCGAATACTCTTAT",2,61.15,9.52,-1.24,0.11,2.64,1.13,0,">1 nonsynonymous","A33R G83K K87N",3
"lib1","SARS-CoV-2","TTCCGAATATGGTAGG",1,52.72,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","N40D L95D N118R",3
"lib1","SARS-CoV-2","TTCCGAATCAGTCTGT",3,90.29,6,-4.76,2,1.5,1.2,0.01,"1 nonsynonymous","L95K",1
"lib1","SARS-CoV-2","TTCCGACAAAATAGTC",4,16.83,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G83C K94C Y119W F134L",4
"lib1","SARS-CoV-2","TTCCGACCATATACGA",1,51.95,7.92,-2.84,0.23,1.5,1.03,0.01,">1 nonsynonymous","D97N G155F Y178L",3
"lib1","SARS-CoV-2","TTCCGACCATTACAAC",21,296.08,10.76,0,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCGACGACAATAAA",2,24.03,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","V65A N92R N107S T148R Y178F",5
"lib1","SARS-CoV-2","TTCCGACGACACTACA",3,73.73,7.01,-3.76,0.47,1.5,1.26,0.04,">1 nonsynonymous","R25M G152N",2
"lib1","SARS-CoV-2","TTCCGACTATCCATGT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","I2W F8* D59T T85V Q176K",5
"lib1","SARS-CoV-2","TTCCGAGCAATACTTT",7,77.95,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","T46L L60Q G86I",3
"lib1","SARS-CoV-2","TTCCGAGGACCAAATA",7,44.68,10.7,-0.06,0.23,2.46,1.01,0.02,">1 nonsynonymous","G9R Y91F",2
"lib1","SARS-CoV-2","TTCCGAGGACCCAATT",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59E I104N F134W",3
"lib1","SARS-CoV-2","TTCCGAGTAAAGTTAA",1,21.35,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","Y35S R124L A145L G166L",4
"lib1","SARS-CoV-2","TTCCGAGTAAGAAGCG",2,0.59,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib1","SARS-CoV-2","TTCCGAGTCCATAATC",8,81.41,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","S36G N118L R136F",3
"lib1","SARS-CoV-2","TTCCGATGAATACATG",2,13.09,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","T15Y R27E Y35R Q84K F134L G146A",6
"lib1","SARS-CoV-2","TTCCGATGTTGGTTTT",1,43.93,10.73,-0.03,0.06,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCGATGTTTTAATG",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S P82F Y143I",3
"lib1","SARS-CoV-2","TTCCGCAAAACTTTCA",2,46.27,9.5,-1.27,0.13,1.88,1.02,0.01,"1 nonsynonymous","Y165R",1
"lib1","SARS-CoV-2","TTCCGCAAGCCTCATA",1,77.71,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S45Y K94W S129Y",3
"lib1","SARS-CoV-2","TTCCGCCAATACTCGT",1,10.77,6,-4.76,2,3,1.33,0.03,">1 nonsynonymous","C102W Y119G F126Y Y165C",4
"lib1","SARS-CoV-2","TTCCGCCACAACAAAG",3,146.58,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","D68G F99V",2
"lib1","SARS-CoV-2","TTCCGCCTGAAAACGC",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F Y91Q",2
"lib1","SARS-CoV-2","TTCCGCGATACCGTCT",2,39.87,9.51,-1.26,0.09,2.84,1.06,0,">1 nonsynonymous","L5W A145F",2
"lib1","SARS-CoV-2","TTCCGCGCACCACAAG",5,70.17,6.17,-4.59,0.46,1.5,1.16,0.01,">1 nonsynonymous","I2C D59L C158L",3
"lib1","SARS-CoV-2","TTCCGCGGTCCTCCGA",4,5.38,NA,NA,NA,NA,NA,NA,"stop","P7L S41G K87S L162*",4
"lib1","SARS-CoV-2","TTCCGCGTGAACAATA",6,35.05,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","K56C F167I",2
"lib1","SARS-CoV-2","TTCCGCTGCCTCGGTT",2,10.81,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K128W C150Y",2
"lib1","SARS-CoV-2","TTCCGCTGTGGTCAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62A N130R S139A",3
"lib1","SARS-CoV-2","TTCCGGAACTACTTGT",2,1.57,NA,NA,NA,NA,NA,NA,"stop","N64* A89I K114* Y119V T201*",5
"lib1","SARS-CoV-2","TTCCGGAATCACAATA",2,28.49,10.7,-0.07,0.04,2.99,1.03,0,">1 nonsynonymous","Y35L N110M P149R",3
"lib1","SARS-CoV-2","TTCCGGAATCCCACAG",3,101.97,10.29,-0.47,0.04,2.94,1,0,"1 nonsynonymous","N171C",1
"lib1","SARS-CoV-2","TTCCGGACACTAGAGA",1,28.88,10.11,-0.66,0.12,2.02,1.01,0.01,">1 nonsynonymous","Y50T I138M",2
"lib1","SARS-CoV-2","TTCCGGAGAAAAACCG",2,93.97,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G152V P161H P191S",3
"lib1","SARS-CoV-2","TTCCGGCCTGCCTCAA",6,105.5,9.95,-0.81,0.07,2.3,1.04,0,">1 nonsynonymous","T3K V77M A81S",3
"lib1","SARS-CoV-2","TTCCGGGACGTTGGGA",2,10.32,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","V103G C158V",2
"lib1","SARS-CoV-2","TTCCGGGCCAAAAAAT",1,27.17,9.61,-1.16,0.19,1.73,1.05,0.01,">1 nonsynonymous","F12G V37T T148E",3
"lib1","SARS-CoV-2","TTCCGGGCTTACGACG",5,31.39,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","C6Y N64S N107G F126V C158D",5
"lib1","SARS-CoV-2","TTCCGGGGCGAAACGC",10,80.62,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","G83R Y93E A105P L122R",4
"lib1","SARS-CoV-2","TTCCGGGTCGATCCCA",10,64.84,6,-4.76,1.61,1.5,1.29,0.03,">1 nonsynonymous","P82M V180T",2
"lib1","SARS-CoV-2","TTCCGGTAATAATTTA",1,22.75,10.29,-0.47,0.08,2.89,1.03,0,">1 nonsynonymous","N4Y N30R",2
"lib1","SARS-CoV-2","TTCCGGTGTAATGGAC",2,17.86,10.16,-0.6,0.18,2.4,1,0.02,"1 nonsynonymous","V52G",1
"lib1","SARS-CoV-2","TTCCGGTTCAAGTCCC",9,112.62,6.56,-4.21,0.33,1.5,1.1,0.01,">1 nonsynonymous","W23M A81G",2
"lib1","SARS-CoV-2","TTCCGTAATCGCACTG",11,193.41,10.5,-0.26,0.05,2.78,1.05,0,">1 nonsynonymous","S36Q Y178N",2
"lib1","SARS-CoV-2","TTCCGTAATGGAAGTA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I D75L V103I N120Y",4
"lib1","SARS-CoV-2","TTCCGTACCTTACCTA",2,0.38,NA,NA,NA,NA,NA,NA,"stop","R25S K48M E141*",3
"lib1","SARS-CoV-2","TTCCGTATAACACCAA",8,101.64,8.25,-2.52,0.3,1.5,1,0.04,">1 nonsynonymous","I88S K198G",2
"lib1","SARS-CoV-2","TTCCGTCAACAGCACA",11,3.4,NA,NA,NA,NA,NA,NA,"stop","S41R V115K C150*",3
"lib1","SARS-CoV-2","TTCCGTCAAGGAAGTC",1,0.21,NA,NA,NA,NA,NA,NA,"stop","S41T P96S G116* P133*",4
"lib1","SARS-CoV-2","TTCCGTCATTACCATG",3,65.78,10.73,-0.03,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCGTCCATTATCTA",1,19.86,10.33,-0.44,0.11,2.7,1,0,">1 nonsynonymous","N1S K94Q",2
"lib1","SARS-CoV-2","TTCCGTCTCAGTAGAT",6,30.82,6,-4.76,2,3,1.14,0,">1 nonsynonymous","T55N T85D N92M Y121I Q168S",5
"lib1","SARS-CoV-2","TTCCGTCTCCGTCAAA",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y C49D Y159D",3
"lib1","SARS-CoV-2","TTCCGTGACAGTAACT",3,51.14,7.84,-2.93,0.22,1.76,1.18,0.01,">1 nonsynonymous","T46W G83Y I142S N157D T201A",5
"lib1","SARS-CoV-2","TTCCGTGAGAAGTTGA",1,11.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6S F70L",2
"lib1","SARS-CoV-2","TTCCGTGAGTTGTCAA",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32E F62C L183S",3
"lib1","SARS-CoV-2","TTCCGTGGAGTGACGA",10,4.42,NA,NA,NA,NA,NA,NA,"stop","V37A S69K Y93* D98P K199T",5
"lib1","SARS-CoV-2","TTCCGTTAGTGTTAAC",3,11.71,10.56,-0.2,0.09,2.91,1.07,0,">1 nonsynonymous","V37L S164L",2
"lib1","SARS-CoV-2","TTCCGTTCATAGTACG",9,260.36,10.37,-0.4,0.04,2.85,1.03,0,">1 nonsynonymous","N58K Y178N",2
"lib1","SARS-CoV-2","TTCCGTTGACGTATCG",5,59.07,6,-4.76,1.68,1.5,1.23,0.01,">1 nonsynonymous","K48F V52S K56R P82I",4
"lib1","SARS-CoV-2","TTCCTAAAAGAACCAC",2,15.53,6.01,-4.76,0.9,1.5,1.15,0.01,">1 nonsynonymous","N1T I28K N40L A81P F126L R136S P149W",7
"lib1","SARS-CoV-2","TTCCTAAAAGCCCCCC",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V N30M V37D V52D L183S",5
"lib1","SARS-CoV-2","TTCCTAACACTATCGT",4,50.2,6.43,-4.34,0.4,1.5,1.13,0.01,">1 nonsynonymous","I2L G51V F62K S129P",4
"lib1","SARS-CoV-2","TTCCTAACTACAAAAA",2,19.13,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","L5E G101D",2
"lib1","SARS-CoV-2","TTCCTAACTCTAAGAA",8,65.79,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N151C Y159D",2
"lib1","SARS-CoV-2","TTCCTAAGCACAAGAA",2,70.17,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A14R K114Q F167A",3
"lib1","SARS-CoV-2","TTCCTAATAATGAAGG",6,40.32,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C6I C61T N92Y N118S",4
"lib1","SARS-CoV-2","TTCCTACAAAAACAGA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","L38M T85V L95* I138P Y165F",5
"lib1","SARS-CoV-2","TTCCTACAAGAGTCCT",9,37.35,10.52,-0.24,0.08,2.81,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCTACACAATAGAG",1,15.51,10.65,-0.12,0.13,2.94,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTCCTACCCTATCTTG",4,5.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T Y91T D98I F156V V182T",5
"lib1","SARS-CoV-2","TTCCTACCTCCCGGAT",1,21.48,6,-4.76,2,1.5,1.19,0.05,">1 nonsynonymous","F12S T100L N120F R127H I142R",5
"lib1","SARS-CoV-2","TTCCTACTAAGGGACA",7,5.34,NA,NA,NA,NA,NA,NA,"stop","Y119* P191F",2
"lib1","SARS-CoV-2","TTCCTACTCACAGCTA",6,42.74,9.52,-1.24,0.21,1.5,1.02,0.02,">1 nonsynonymous","I2G F47C Y66S N120Y",4
"lib1","SARS-CoV-2","TTCCTACTGAAAAAGA",3,3.06,NA,NA,NA,NA,NA,NA,"stop","S45* Q168L",2
"lib1","SARS-CoV-2","TTCCTAGCCCGTAATT",2,24.17,10.41,-0.36,0.1,2.89,1.08,0,"1 nonsynonymous","Q144D",1
"lib1","SARS-CoV-2","TTCCTAGGTAACCTGT",2,31.93,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","A14Y L95R T100P R136C",4
"lib1","SARS-CoV-2","TTCCTAGGTACAGGAT",4,0.87,NA,NA,NA,NA,NA,NA,"stop","N13* Y35G A42S E141T P161L",5
"lib1","SARS-CoV-2","TTCCTAGGTCAGCAAC",7,194.33,9.7,-1.06,0.05,2.77,1.04,0,">1 nonsynonymous","K48L K56L Y119R",3
"lib1","SARS-CoV-2","TTCCTAGGTGTGACTG",2,26.77,8.45,-2.31,0.31,1.5,1.07,0.04,">1 nonsynonymous","K56I P96R I138S",3
"lib1","SARS-CoV-2","TTCCTAGTAGGCTGTC",2,5.03,8.68,-2.09,0.12,3,1,0,">1 nonsynonymous","K26F K114D T170Y",3
"lib1","SARS-CoV-2","TTCCTATAACTTACAC",3,8.64,6.52,-4.25,0.43,3,1.24,0.01,">1 nonsynonymous","G9L V103F P149I L183S",4
"lib1","SARS-CoV-2","TTCCTATACCTGATTA",4,91.95,9.11,-1.65,0.07,2.66,1.12,0,">1 nonsynonymous","T63F A145L P197V",3
"lib1","SARS-CoV-2","TTCCTATCACTCATAA",2,9.87,6.69,-4.07,0.36,1.5,1.14,0.02,">1 nonsynonymous","F8V Y39H N92Y",3
"lib1","SARS-CoV-2","TTCCTATCCAGACGTG",2,41.73,6.2,-4.56,0.45,1.5,1.12,0.01,">1 nonsynonymous","K48L N64R S69G",3
"lib1","SARS-CoV-2","TTCCTATCCATTTAGC",3,56.64,10.49,-0.28,0.06,2.97,1,0,">1 nonsynonymous","V37T A81R N120D",3
"lib1","SARS-CoV-2","TTCCTATGAAGAAAAA",2,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93N",1
"lib1","SARS-CoV-2","TTCCTATTATACATTA",1,0.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105D",1
"lib1","SARS-CoV-2","TTCCTATTGGAAACAG",6,25.08,8.57,-2.19,0.25,1.56,1.11,0.02,">1 nonsynonymous","A89M P149F",2
"lib1","SARS-CoV-2","TTCCTCAATAGGCTCG",2,54.78,10.48,-0.29,0.04,2.96,1.04,0,">1 nonsynonymous","V37A K87A",2
"lib1","SARS-CoV-2","TTCCTCAATTCTAAAT",6,189.29,10.31,-0.46,0.03,2.82,1.04,0,">1 nonsynonymous","V37C A81S",2
"lib1","SARS-CoV-2","TTCCTCAGCACCCAGT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","G9* A14M R16G E76A N92R T100N W106E C150W Y165K S200M",10
"lib1","SARS-CoV-2","TTCCTCAGCAGCATTC",6,170.79,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6V I72K V77Y",3
"lib1","SARS-CoV-2","TTCCTCAGGATTCAAA",5,25.49,6.81,-3.95,0.58,2.02,1.14,0.06,">1 nonsynonymous","N1S I104K Y121Q",3
"lib1","SARS-CoV-2","TTCCTCATGCAACCAT",1,51.88,10.61,-0.16,0.05,2.85,1.09,0,">1 nonsynonymous","S129Y P149A",2
"lib1","SARS-CoV-2","TTCCTCATTGTAATAA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","G9A Y35* N157E",3
"lib1","SARS-CoV-2","TTCCTCCAAATATAAG",3,41.75,10.67,-0.09,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCCTCCATCAATATG",4,24.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19M D90V",2
"lib1","SARS-CoV-2","TTCCTCCCGTGAATCT",1,0.32,NA,NA,NA,NA,NA,NA,"stop","P82G T85M G166*",3
"lib1","SARS-CoV-2","TTCCTCCTAATGCAAA",1,58.32,10.68,-0.09,0.08,2.86,1.1,0,">1 nonsynonymous","Q84R S129Q",2
"lib1","SARS-CoV-2","TTCCTCCTCATAACTA",4,13.99,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N1M S45H C49A Y91L K128S",5
"lib1","SARS-CoV-2","TTCCTCCTTCGCAGAT",3,35.68,9.94,-0.82,0.1,2.53,1.03,0,">1 nonsynonymous","A33T G152Y V173F",3
"lib1","SARS-CoV-2","TTCCTCCTTGTAAAAC",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L V103L K199Q",3
"lib1","SARS-CoV-2","TTCCTCGACTTCAGTG",7,80,8.52,-2.24,0.2,1.51,1.14,0.01,">1 nonsynonymous","C61T Y165N",2
"lib1","SARS-CoV-2","TTCCTCGCTGCATTGA",6,63.12,10.7,-0.06,0.06,2.97,1.02,0,"1 nonsynonymous","R27V",1
"lib1","SARS-CoV-2","TTCCTCGGCCCACGCG",3,10.79,7.99,-2.78,0.4,2.52,1.13,0.06,">1 nonsynonymous","I2C T15R S41K",3
"lib1","SARS-CoV-2","TTCCTCGTAACACGTA",4,106.1,6.34,-4.42,0.45,1.5,1.14,0.02,">1 nonsynonymous","T3L F12Q C49Q D59L N107C P161S R179G",7
"lib1","SARS-CoV-2","TTCCTCGTACACCTGA",9,85.58,10.8,0.04,0.06,2.95,1.02,0,"1 nonsynonymous","P7Q",1
"lib1","SARS-CoV-2","TTCCTCTATTCTCCCT",7,71.45,10.25,-0.51,0.11,2.69,1,0.01,">1 nonsynonymous","D90T V115M",2
"lib1","SARS-CoV-2","TTCCTCTGCCGCCACC",1,39.04,10.81,0.05,0.1,2.87,1.11,0,"1 nonsynonymous","Y175W",1
"lib1","SARS-CoV-2","TTCCTCTGGCCTTTGC",3,9.01,6.54,-4.23,2,3,1.26,0.02,">1 nonsynonymous","N4M V37I V103R",3
"lib1","SARS-CoV-2","TTCCTCTTTGATCCTC",1,57.82,10.7,-0.07,0.03,2.97,1,0,">1 nonsynonymous","F160P H189Y",2
"lib1","SARS-CoV-2","TTCCTGAAAAACTAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","F62* R73L Q144P",3
"lib1","SARS-CoV-2","TTCCTGAAGCGGCGAT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","N1L D34Q S129* V173A",4
"lib1","SARS-CoV-2","TTCCTGATGCTATAAA",5,65.38,6.48,-4.28,0.27,1.5,1.13,0.01,">1 nonsynonymous","G86L G155S",2
"lib1","SARS-CoV-2","TTCCTGCACTCCCTGG",5,31.45,7.1,-3.66,0.5,1.5,1.16,0.07,">1 nonsynonymous","C49S K87E G146S G152T K199Y",5
"lib1","SARS-CoV-2","TTCCTGGGTCCCCGGA",7,108.23,10.41,-0.35,0.05,2.91,1.05,0,">1 nonsynonymous","T140S G174D T201S",3
"lib1","SARS-CoV-2","TTCCTTAAACTCGAGG",6,169.77,10.77,0.01,0.07,2.9,1.03,0,"1 nonsynonymous","I72L",1
"lib1","SARS-CoV-2","TTCCTTAAGCAAAAAC",3,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87M I104S E135P L162M Q168M",5
"lib1","SARS-CoV-2","TTCCTTACATCCCACT",1,15.4,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F17T R78L W106Q Q176R",4
"lib1","SARS-CoV-2","TTCCTTAGAATCAATA",2,22.35,10.62,-0.14,0.09,2.86,1.07,0.01,"1 nonsynonymous","V32R",1
"lib1","SARS-CoV-2","TTCCTTAGATTGCCCT",10,246.15,10.65,-0.12,0.04,2.92,1.04,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TTCCTTATACCCAGAG",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G D68L K94N I104K",4
"lib1","SARS-CoV-2","TTCCTTATGTGCTTGA",4,41.18,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","L5A N58P S69V K94E",4
"lib1","SARS-CoV-2","TTCCTTCACCTAAGGT",2,2.44,NA,NA,NA,NA,NA,NA,"stop","N40* R124M K199L",3
"lib1","SARS-CoV-2","TTCCTTCGACTAAACA",3,29.18,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","I80R A89V E141Y P177Q",4
"lib1","SARS-CoV-2","TTCCTTCTATGGGACT",2,1.71,NA,NA,NA,NA,NA,NA,"stop","L5K Q84* L95S N120Y V153G",5
"lib1","SARS-CoV-2","TTCCTTCTTAAATATG",5,26.71,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F62L G101P F160P",3
"lib1","SARS-CoV-2","TTCCTTTAAGACGAAT",2,27.62,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","L5R R27A V77R P133D",4
"lib1","SARS-CoV-2","TTCCTTTCAAATCTTG",4,103.56,9.93,-0.83,0.08,2.24,1.02,0,">1 nonsynonymous","K26V K94Y",2
"lib1","SARS-CoV-2","TTCCTTTGCAGCAGAT",1,7,7.22,-3.55,0.32,1.5,1.14,0.02,">1 nonsynonymous","T3Y A67H",2
"lib1","SARS-CoV-2","TTCCTTTTAAACATGA",5,50.17,7.91,-2.86,0.16,1.67,1.09,0.01,">1 nonsynonymous","V32K T55G R73V",3
"lib1","SARS-CoV-2","TTCGAAAACTTGCAAG",1,5.69,9.26,-1.5,0.2,2.19,1.06,0.02,">1 nonsynonymous","E10P R127S",2
"lib1","SARS-CoV-2","TTCGAAAAGTGTTTTT",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W Y119Q F185M",3
"lib1","SARS-CoV-2","TTCGAAACAATTAACT",5,26.15,10.4,-0.37,0.06,2.88,1.03,0,">1 nonsynonymous","A33L N40G P149I",3
"lib1","SARS-CoV-2","TTCGAAACATTGATGC",4,44.7,6,-4.76,1.63,1.5,1.1,0,">1 nonsynonymous","L5Q F99V P161L Y178S",4
"lib1","SARS-CoV-2","TTCGAAAGAAACCAAG",3,27.98,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F44M D68P Q163P",3
"lib1","SARS-CoV-2","TTCGAAAGATGCTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T15K S19* F44S T100D V173H",5
"lib1","SARS-CoV-2","TTCGAAAGCGACTGAA",5,44.58,10.47,-0.29,0.03,2.93,1.02,0,"1 nonsynonymous","T85W",1
"lib1","SARS-CoV-2","TTCGAAAGTAACCAAA",3,30.2,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","R25K C31D",2
"lib1","SARS-CoV-2","TTCGAAAGTTAAACAC",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84F P133H I142K N157M K198G",5
"lib1","SARS-CoV-2","TTCGAAATCGCTCTTT",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M L60P",2
"lib1","SARS-CoV-2","TTCGAAATGAAAAGAT",1,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S S139L F156T",3
"lib1","SARS-CoV-2","TTCGAACACCCAAAAA",1,9.97,6.56,-4.2,1.13,3,1.14,0.02,">1 nonsynonymous","P54N V71R",2
"lib1","SARS-CoV-2","TTCGAACACCCTGGCG",3,71.74,10.68,-0.08,0.06,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCGAACAGCCCTAAT",6,143.55,10.39,-0.38,0.06,2.85,1.02,0,"1 nonsynonymous","P7V",1
"lib1","SARS-CoV-2","TTCGAACAGGACCTTT",5,60.6,10.34,-0.43,0.07,2.86,1.02,0,"1 nonsynonymous","R127A",1
"lib1","SARS-CoV-2","TTCGAACCCCATGTTT",3,18.39,10.19,-0.57,0.1,2.75,1,0,"1 nonsynonymous","D34V",1
"lib1","SARS-CoV-2","TTCGAACCTCCGACAA",5,102.53,9.34,-1.43,0.08,2.85,1.09,0,"1 nonsynonymous","Y119E",1
"lib1","SARS-CoV-2","TTCGAACTACTAGTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6Q S45R S69*",3
"lib1","SARS-CoV-2","TTCGAACTCATGTGGT",1,46.49,9.06,-1.71,0.14,1.66,1.19,0.01,"1 nonsynonymous","Y50C",1
"lib1","SARS-CoV-2","TTCGAACTGAACCGAA",2,1.51,NA,NA,NA,NA,NA,NA,"stop","T3V S36* G146V",3
"lib1","SARS-CoV-2","TTCGAACTTTGCTTAT",1,27.21,10.56,-0.21,0.07,2.89,1,0,">1 nonsynonymous","G51N L60N E141V",3
"lib1","SARS-CoV-2","TTCGAAGAGGGTATTG",19,328.16,10.58,-0.18,0.03,2.89,1.04,0,">1 nonsynonymous","C61L N110T",2
"lib1","SARS-CoV-2","TTCGAAGGTCTGATAC",1,7.58,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","S41W Y50P E141S",3
"lib1","SARS-CoV-2","TTCGAATACACACTTT",1,12.99,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S29P N64P V103C I142E P177F",5
"lib1","SARS-CoV-2","TTCGAATCAATATTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","N4R E10V S53G Q84* Y121*",5
"lib1","SARS-CoV-2","TTCGAATTATGCTACG",3,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I T201V",2
"lib1","SARS-CoV-2","TTCGAATTTACAGCTG",13,197.79,10.16,-0.61,0.05,2.71,1.02,0,">1 nonsynonymous","G83E E141L",2
"lib1","SARS-CoV-2","TTCGACACAGCATGAA",5,61.53,10.67,-0.09,0.11,2.94,1.04,0.01,"1 nonsynonymous","L60K",1
"lib1","SARS-CoV-2","TTCGACACTGACACTT",4,61.08,10,-0.77,0.07,2.75,1.04,0,">1 nonsynonymous","Y39V Y121S",2
"lib1","SARS-CoV-2","TTCGACAGCCTTCAAT",1,19.23,10.61,-0.16,0.09,2.8,1.12,0,">1 nonsynonymous","F62P N151A",2
"lib1","SARS-CoV-2","TTCGACATTGGCCGGA",4,92.4,10.28,-0.49,0.06,2.82,1.05,0,">1 nonsynonymous","T100S T140K G155A",3
"lib1","SARS-CoV-2","TTCGACCACCAATACT",3,45.13,8.76,-2,0.13,1.87,1.13,0.01,">1 nonsynonymous","Y35S Y165H",2
"lib1","SARS-CoV-2","TTCGACCACTGACGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","I28* V37S L60A V77N",4
"lib1","SARS-CoV-2","TTCGACCGGTAGTGAG",7,86.3,6,-4.76,2,3,1.24,0.01,">1 nonsynonymous","G51K L60R V71Y Y143S N157P T201V",6
"lib1","SARS-CoV-2","TTCGACCTATATCTTA",5,81.4,8.67,-2.09,0.14,2.23,1.1,0.01,">1 nonsynonymous","S29N A105S L122Y Q176L",4
"lib1","SARS-CoV-2","TTCGACCTGATTAGGT",3,74.45,9.98,-0.78,0.09,2.28,1.07,0,">1 nonsynonymous","A33W A81G A105W V153I F160R",5
"lib1","SARS-CoV-2","TTCGACGAATAATAAA",2,96.68,10.28,-0.48,0.06,2.71,1.01,0,">1 nonsynonymous","E10R R16F K128S",3
"lib1","SARS-CoV-2","TTCGACGCAAATTTAA",5,42.09,6.85,-3.92,0.31,1.5,1.13,0.02,">1 nonsynonymous","D98S E141S V180F",3
"lib1","SARS-CoV-2","TTCGACGGCTAAGACA",1,9.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N110T S129C Q176S H189F",4
"lib1","SARS-CoV-2","TTCGACTCATTTACAA",10,176.34,10.69,-0.07,0.03,2.92,1.05,0,"1 nonsynonymous","P7A",1
"lib1","SARS-CoV-2","TTCGACTGAGTCCATA",3,13.66,9.47,-1.3,0.3,2.22,1.01,0.03,">1 nonsynonymous","S45T Y121T",2
"lib1","SARS-CoV-2","TTCGACTGTGTTACGT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib1","SARS-CoV-2","TTCGAGAACCAATAGG",2,0.86,NA,NA,NA,NA,NA,NA,"stop","I2S E10* K114G P133T P169A",5
"lib1","SARS-CoV-2","TTCGAGACCTTACATG",2,13.81,8.34,-2.42,0.27,1.5,1.17,0.04,">1 nonsynonymous","S69M D90V",2
"lib1","SARS-CoV-2","TTCGAGAGAGTAAATC",3,2.32,NA,NA,NA,NA,NA,NA,"stop","I2F F44H N92E W106*",4
"lib1","SARS-CoV-2","TTCGAGAGGGATCTAC",2,11.9,9.5,-1.26,0.18,2.18,1.04,0.02,">1 nonsynonymous","D97V I104W N107R",3
"lib1","SARS-CoV-2","TTCGAGAGGTACAAGG",3,33.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1F K48L Q79A N151Q",4
"lib1","SARS-CoV-2","TTCGAGAGTCATAATA",1,24.96,9.09,-1.67,0.11,2.83,1.14,0.01,"1 nonsynonymous","T170L",1
"lib1","SARS-CoV-2","TTCGAGATATACATCC",5,24.07,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","S19W W23P Y91E E186G",4
"lib1","SARS-CoV-2","TTCGAGATCTCCGTAC",3,28.6,6.94,-3.83,0.25,1.5,1.12,0.01,"1 nonsynonymous","Y50D",1
"lib1","SARS-CoV-2","TTCGAGCAACCAATTA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K V37G K87L N157Y",4
"lib1","SARS-CoV-2","TTCGAGCACCCACAGT",5,37.17,10.72,-0.05,0.05,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCGAGCCAACCATTG",2,12.72,8.02,-2.74,0.2,1.5,1,0.02,">1 nonsynonymous","A33S F44R K87Q L131V E154L",5
"lib1","SARS-CoV-2","TTCGAGCCAGTACTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R W106L",2
"lib1","SARS-CoV-2","TTCGAGGATCAATGAC",1,25.57,6,-4.76,1.26,1.5,1.21,0.02,">1 nonsynonymous","T3L V32D D68M",3
"lib1","SARS-CoV-2","TTCGAGGGTCAATTAG",3,30.87,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","L5Q R124S R179C",3
"lib1","SARS-CoV-2","TTCGAGTATACAACAA",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G83H D90S N107Y G166L",5
"lib1","SARS-CoV-2","TTCGAGTCTTCTGCAT",1,14.5,10.44,-0.33,0.08,2.9,1.11,0,">1 nonsynonymous","I2L A42Q C61H",3
"lib1","SARS-CoV-2","TTCGATAAAACGCGGA",2,7.15,6,-4.76,2,1.5,1.04,0.01,">1 nonsynonymous","S45K S69E D98I",3
"lib1","SARS-CoV-2","TTCGATAAACTGCTTT",4,17.97,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","R78Y D90Y A105P L188H",4
"lib1","SARS-CoV-2","TTCGATAAAGTATAGG",3,82.84,10.28,-0.48,0.05,2.79,1.02,0,">1 nonsynonymous","S69T Y178N",2
"lib1","SARS-CoV-2","TTCGATACCCAAGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N13H A89C T100*",3
"lib1","SARS-CoV-2","TTCGATACCTCGCTTA",2,25.15,6.24,-4.52,0.31,1.71,1.04,0,">1 nonsynonymous","I88N L95F K198M",3
"lib1","SARS-CoV-2","TTCGATAGCTAAGTAG",7,47.51,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","C6R S36N C49K K128V Q176L",5
"lib1","SARS-CoV-2","TTCGATATACGCCGGC",9,8.44,NA,NA,NA,NA,NA,NA,"stop","N30* T63G T201K",3
"lib1","SARS-CoV-2","TTCGATCACTGAACAT",2,84.31,10.25,-0.51,0.04,2.81,1.01,0,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","TTCGATCACTTACTAC",2,1.7,NA,NA,NA,NA,NA,NA,"stop","R27K S36H D68W I80* Y175I V181P",6
"lib1","SARS-CoV-2","TTCGATCAGTGTTTCA",1,27.28,6,-4.76,2,1.5,1.26,0.06,">1 nonsynonymous","G9V L38Y V77K P161R",4
"lib1","SARS-CoV-2","TTCGATCTCAAACGCG",1,48.41,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N4L L60W Y91H V181C",4
"lib1","SARS-CoV-2","TTCGATCTGCTCATCT",2,29.94,6.04,-4.73,1.13,1.5,1.16,0.03,">1 nonsynonymous","G101Y V173R",2
"lib1","SARS-CoV-2","TTCGATGAAATACCGT",3,84.46,10.22,-0.54,0.08,2.48,1.05,0,">1 nonsynonymous","N1L A14V",2
"lib1","SARS-CoV-2","TTCGATGACCCTCCTA",10,49.75,10.88,0.12,0.08,2.97,1.01,0,">1 nonsynonymous","I2E P54R",2
"lib1","SARS-CoV-2","TTCGATGACGGTAGGC",1,50.44,10.83,0.07,0.1,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCGATGCATAAAATG",5,43.65,6,-4.76,1.65,1.5,1.2,0.03,">1 nonsynonymous","C61R G172E",2
"lib1","SARS-CoV-2","TTCGATGCGTATTAAG",1,13.11,9.79,-0.98,0.09,2.85,1.11,0,">1 nonsynonymous","K48M Y175H",2
"lib1","SARS-CoV-2","TTCGATGCTGCATACT",3,47.2,10.05,-0.72,0.09,1.98,1.11,0,">1 nonsynonymous","G51D S129L",2
"lib1","SARS-CoV-2","TTCGATGTTTCAGTGA",2,43.23,9.69,-1.08,0.15,1.88,1.13,0.01,">1 nonsynonymous","L5T N40T A67S",3
"lib1","SARS-CoV-2","TTCGATTAACTTGATG",9,80.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161H",1
"lib1","SARS-CoV-2","TTCGATTAGTACATCA",1,34.84,10.77,0.01,0.08,2.93,1.02,0,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","TTCGATTATCCTTTGA",10,6.69,NA,NA,NA,NA,NA,NA,"stop","T55* T140G",2
"lib1","SARS-CoV-2","TTCGCAAAAAAAGACC",1,12.22,10.88,0.12,0.1,2.87,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCGCAAAGACCACCC",5,19.42,6,-4.76,2,1.5,1.31,0.04,">1 nonsynonymous","V52A Y91G D98V K132H",4
"lib1","SARS-CoV-2","TTCGCAAATTAATCAT",1,20.95,10.77,0.01,0.08,2.85,1.1,0,">1 nonsynonymous","T3L N40R N171Y",3
"lib1","SARS-CoV-2","TTCGCAACATATCTTA",3,21.03,9.91,-0.85,0.18,2.29,1.02,0.01,">1 nonsynonymous","P7S T15L G83T",3
"lib1","SARS-CoV-2","TTCGCAAGTTGCAAAT",2,20.37,10.14,-0.63,0.11,2.7,1.05,0.01,">1 nonsynonymous","A33S G116F",2
"lib1","SARS-CoV-2","TTCGCAATATATAAAA",8,3.62,NA,NA,NA,NA,NA,NA,"stop","A145F Y175*",2
"lib1","SARS-CoV-2","TTCGCAATCTTTGGGA",1,31.25,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","Y91R N120S R124H I142A G155V",5
"lib1","SARS-CoV-2","TTCGCACGGTGAGATT",3,43.54,10.09,-0.68,0.09,2.75,1.06,0,">1 nonsynonymous","S43I A105V",2
"lib1","SARS-CoV-2","TTCGCACTACCGCCTG",6,94.56,10.85,0.09,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCGCACTTCCGTGCA",2,83.24,10.07,-0.69,0.06,2.87,1,0,">1 nonsynonymous","Y91N Y121L",2
"lib1","SARS-CoV-2","TTCGCAGGGCGGGGCT",2,103.61,10.74,-0.02,0.07,2.87,1.08,0,"1 nonsynonymous","S129R",1
"lib1","SARS-CoV-2","TTCGCATATTATTATT",1,10.15,8.26,-2.5,0.65,1.5,1,0.07,">1 nonsynonymous","L5V K26T A89L K128G A190R",5
"lib1","SARS-CoV-2","TTCGCCAGGTTTCTCA",1,15.48,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F8R N24R L57I L162H",4
"lib1","SARS-CoV-2","TTCGCCCAAAACCTGG",8,186.9,10.52,-0.25,0.06,2.91,1.01,0,">1 nonsynonymous","N4K K128V S164Y",3
"lib1","SARS-CoV-2","TTCGCCCACGACAGCT",5,12.87,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2V S69R T85W L122M S139Y T201K",6
"lib1","SARS-CoV-2","TTCGCCCAGACTAGGA",6,66.57,6,-4.76,1.37,1.5,1.17,0.02,">1 nonsynonymous","T55A N92L E135N R179D",4
"lib1","SARS-CoV-2","TTCGCCCCTAATCGCT",5,0.22,NA,NA,NA,NA,NA,NA,"stop","N40* N64I R127* P177A",4
"lib1","SARS-CoV-2","TTCGCCCTTGAATATT",4,48.97,10.56,-0.2,0.05,2.89,1.07,0,"1 nonsynonymous","T15V",1
"lib1","SARS-CoV-2","TTCGCCGTTCCTAACG",2,74.5,10.79,0.03,0.06,2.92,1.05,0,">1 nonsynonymous","C61N Q168W S200C",3
"lib1","SARS-CoV-2","TTCGCCTTCCCTATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib1","SARS-CoV-2","TTCGCGAAATAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* T100Y R127A R136C",4
"lib1","SARS-CoV-2","TTCGCGAACATACTAT",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L N107R Y119F Q144C Y165A",5
"lib1","SARS-CoV-2","TTCGCGAGGATACACG",2,3.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183A",1
"lib1","SARS-CoV-2","TTCGCGATAACTAGAC",1,65.31,9.89,-0.88,0.15,1.93,1.1,0.01,">1 nonsynonymous","P96H S129F",2
"lib1","SARS-CoV-2","TTCGCGATCATACTCA",2,32.49,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","L95A L187H A192T",3
"lib1","SARS-CoV-2","TTCGCGCGGTCCGCGG",1,5.66,6.11,-4.65,2,1.5,1.21,0.04,">1 nonsynonymous","S41P Y50S K56S",3
"lib1","SARS-CoV-2","TTCGCGCTAACAGCTG",3,22.78,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","A89V G146P",2
"lib1","SARS-CoV-2","TTCGCGCTCAAGTCAA",5,109.18,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","C6W V37F V77K F134M Q163I",5
"lib1","SARS-CoV-2","TTCGCGCTGCAAGCAT",1,36.09,7.27,-3.49,0.33,1.5,1.08,0.03,">1 nonsynonymous","T55A D97K D112H T201A",4
"lib1","SARS-CoV-2","TTCGCGCTTATTTCGA",7,161.23,8.94,-1.83,0.06,2.79,1.08,0,">1 nonsynonymous","K26W Y119N",2
"lib1","SARS-CoV-2","TTCGCGGAGAAATACA",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R P133A L162P",3
"lib1","SARS-CoV-2","TTCGCGGTAATGAAAG",7,46.51,10.81,0.05,0.05,2.97,1.01,0,"1 nonsynonymous","I142M",1
"lib1","SARS-CoV-2","TTCGCTAATCCAATAA",2,12.76,9.71,-1.06,0.17,2.04,1.04,0.01,"1 nonsynonymous","D137H",1
"lib1","SARS-CoV-2","TTCGCTACCCGTTGAA",4,30.66,7.84,-2.93,0.4,1.5,1.1,0.05,">1 nonsynonymous","G9L P82A",2
"lib1","SARS-CoV-2","TTCGCTAGATTAATAT",1,9.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N1R V77Y S113W",3
"lib1","SARS-CoV-2","TTCGCTATCTCCTCGC",5,117.41,10.34,-0.43,0.03,2.85,1.05,0,"1 nonsynonymous","I104A",1
"lib1","SARS-CoV-2","TTCGCTCACATTCAAA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","G74L Y123G G172*",3
"lib1","SARS-CoV-2","TTCGCTGACTCAGTTT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","G9W Y121* F156S",3
"lib1","SARS-CoV-2","TTCGCTGATGATAAAT",10,3.34,NA,NA,NA,NA,NA,NA,"stop","R27* V37F G174L",3
"lib1","SARS-CoV-2","TTCGCTTACTATGGTA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","T15C K26V Y91T S129M N157*",5
"lib1","SARS-CoV-2","TTCGCTTTCCAAGGAC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","E10S S200*",2
"lib1","SARS-CoV-2","TTCGCTTTCTGTACAT",3,3.97,NA,NA,NA,NA,NA,NA,"stop","K48* R179T",2
"lib1","SARS-CoV-2","TTCGGAAAATACAAAC",2,13.2,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L5K T85V F134C P161M",4
"lib1","SARS-CoV-2","TTCGGAACAACAATCG",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S A67D W106E K132A",4
"lib1","SARS-CoV-2","TTCGGAACTATCCAAA",2,97.74,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","N120R P177Y",2
"lib1","SARS-CoV-2","TTCGGAATGATTACAA",2,66.97,10.89,0.12,0.1,2.83,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCGGAATGTAACATG",2,13.49,10.09,-0.68,0.08,2.71,1.03,0,">1 nonsynonymous","V77M E141V",2
"lib1","SARS-CoV-2","TTCGGACAAGCATTAA",3,47.68,10.66,-0.11,0.04,2.95,1.03,0,"1 nonsynonymous","T63S",1
"lib1","SARS-CoV-2","TTCGGACCCATTGACG",4,54.49,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","K56R A81R Y119C E141F Q168L",5
"lib1","SARS-CoV-2","TTCGGACGCAGCTATC",2,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S A67H L122S D137L",4
"lib1","SARS-CoV-2","TTCGGACTATTGTGGG",11,108.8,7.99,-2.77,0.15,1.5,1.19,0.01,"1 nonsynonymous","G86Y",1
"lib1","SARS-CoV-2","TTCGGAGAAACTAAGT",1,69.92,10.71,-0.05,0.05,2.97,1,0,">1 nonsynonymous","I28L K87R",2
"lib1","SARS-CoV-2","TTCGGAGAAGTGCCTA",7,141.23,10.58,-0.18,0.03,2.95,1.04,0,">1 nonsynonymous","G9K N151L",2
"lib1","SARS-CoV-2","TTCGGAGCTGCTACGG",5,3.36,NA,NA,NA,NA,NA,NA,"stop","A89* S113G Y121P K128Y P161R",5
"lib1","SARS-CoV-2","TTCGGAGTGGTACCGG",4,57.57,10.62,-0.14,0.06,2.91,1,0,">1 nonsynonymous","Y66H T100I",2
"lib1","SARS-CoV-2","TTCGGATTGAGGCACA",7,218.69,9.4,-1.36,0.11,1.77,1.11,0.01,">1 nonsynonymous","Y35Q N120W E141K",3
"lib1","SARS-CoV-2","TTCGGATTTAACTACT",1,13.32,6,-4.76,1.64,1.5,1.14,0.02,">1 nonsynonymous","V77S K87Q F99Y",3
"lib1","SARS-CoV-2","TTCGGCACCGAATCAT",2,22.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6F F17E D90L",3
"lib1","SARS-CoV-2","TTCGGCAGACGGCCAA",7,72.78,10.78,0.01,0.06,2.88,1.09,0,"1 nonsynonymous","K132R",1
"lib1","SARS-CoV-2","TTCGGCATAGTAACTG",3,8.46,10.39,-0.38,0.12,2.95,1,0,">1 nonsynonymous","R27V E135V",2
"lib1","SARS-CoV-2","TTCGGCCCGGACGTAA",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y P161F",2
"lib1","SARS-CoV-2","TTCGGCCTTAGTTAGA",14,174.56,10.1,-0.67,0.09,2.42,1.05,0,">1 nonsynonymous","V37T V103I S139C",3
"lib1","SARS-CoV-2","TTCGGCTTGTTATCTA",3,100.54,10,-0.76,0.06,2.21,1.08,0,">1 nonsynonymous","E10D T55R D90G P149T",4
"lib1","SARS-CoV-2","TTCGGGAAAGTAAAGG",2,4.99,NA,NA,NA,NA,NA,NA,"stop","T3S I28R N64R D90R Y119T C158* P191T",7
"lib1","SARS-CoV-2","TTCGGGACACAAGCAT",3,42.72,10.3,-0.46,0.1,2.87,1,0,">1 nonsynonymous","D90E F126L",2
"lib1","SARS-CoV-2","TTCGGGAGATAACTTA",8,98.9,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V77A C158P S200N",3
"lib1","SARS-CoV-2","TTCGGGAGCCTGTTAC",2,35.56,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Q84C Y91D Y143K",3
"lib1","SARS-CoV-2","TTCGGGCAAAGTCCAA",4,42.49,9.94,-0.82,0.14,2.73,1.02,0.01,">1 nonsynonymous","I2C N120T S184T",3
"lib1","SARS-CoV-2","TTCGGGCGAAATGTTT",1,7.53,10.59,-0.17,0.07,2.91,1,0,">1 nonsynonymous","F134Y E186P",2
"lib1","SARS-CoV-2","TTCGGGCTACAGATAC",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I V77E D98P G117S K128S S139T Q168W V173K",8
"lib1","SARS-CoV-2","TTCGGGGACCGAAAAT",6,78.65,10.52,-0.25,0.07,2.88,1.02,0,">1 nonsynonymous","A33S T46Q C61D",3
"lib1","SARS-CoV-2","TTCGGGGCATTGTACC",5,20.89,8.85,-1.91,0.19,1.83,1.11,0.02,">1 nonsynonymous","W106S P149W F156L",3
"lib1","SARS-CoV-2","TTCGGGTTAGATCCCT",11,36.62,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37C N64H T100P I142S",4
"lib1","SARS-CoV-2","TTCGGTAAAAAAGAGT",3,21.64,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","K56Y N92L I104F K128M",4
"lib1","SARS-CoV-2","TTCGGTAAAATTTACT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","N4* P161M",2
"lib1","SARS-CoV-2","TTCGGTAAATTTTACC",1,14.73,9.89,-0.87,0.12,2.61,1.05,0.01,">1 nonsynonymous","F17Y Y39S C61L",3
"lib1","SARS-CoV-2","TTCGGTACTGACTGTC",3,89.34,6,-4.76,2,3,1.17,0,">1 nonsynonymous","G9F C61V P177D",3
"lib1","SARS-CoV-2","TTCGGTCTTTGTTCAA",5,82.93,7.92,-2.85,0.23,1.5,1.14,0.02,">1 nonsynonymous","Y91S I104S G166N",3
"lib1","SARS-CoV-2","TTCGGTGACTTCGTAC",8,108.6,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","S36L L57S F62T Q168L",4
"lib1","SARS-CoV-2","TTCGGTGAGCATCCGA",2,73.63,10.43,-0.34,0.07,2.9,1,0,">1 nonsynonymous","Y35T T201R",2
"lib1","SARS-CoV-2","TTCGGTGGACCTAATG",1,10.84,6,-4.76,2,1.5,1.25,0.05,">1 nonsynonymous","V77P W106L",2
"lib1","SARS-CoV-2","TTCGGTTGCTTTGAGG",1,19.35,8.42,-2.34,0.19,2.62,1.17,0.01,">1 nonsynonymous","T55G S129I N157H Q168R",4
"lib1","SARS-CoV-2","TTCGGTTTAACCTTCC",4,0.27,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib1","SARS-CoV-2","TTCGTAAAACAAACGA",2,17.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61F D137H",2
"lib1","SARS-CoV-2","TTCGTAAAAGGTAGTA",3,47.77,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","K56N E76R N107F G146Y",4
"lib1","SARS-CoV-2","TTCGTAAATAACTATC",2,20.69,7.82,-2.94,0.35,1.5,1.08,0.03,">1 nonsynonymous","F44I I104M L125F G155L",4
"lib1","SARS-CoV-2","TTCGTAACAACATATA",3,10.45,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","C49D S53P",2
"lib1","SARS-CoV-2","TTCGTAACCTGTAACC",3,47.49,10.75,-0.01,0.09,2.88,1.09,0,"1 nonsynonymous","N4T",1
"lib1","SARS-CoV-2","TTCGTACAACCCCCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V52* I72* I104N",3
"lib1","SARS-CoV-2","TTCGTACACTTATAAC",1,164.59,10.12,-0.65,0.05,2.85,1.02,0,"1 nonsynonymous","C6A",1
"lib1","SARS-CoV-2","TTCGTACATATGATCG",2,11.57,6,-4.76,2,1.5,1.03,0,">1 nonsynonymous","P54E I72S D90W V180M",4
"lib1","SARS-CoV-2","TTCGTACCAGCAATCA",5,26.32,10.46,-0.3,0.25,2.61,1.07,0.04,">1 nonsynonymous","N4E E10L",2
"lib1","SARS-CoV-2","TTCGTACCATTGCCAG",6,126.74,6.06,-4.7,0.77,1.5,1.17,0.01,"1 nonsynonymous","Q176P",1
"lib1","SARS-CoV-2","TTCGTACTAGTTGCAT",3,24.75,6.56,-4.21,0.47,1.5,1.05,0.03,">1 nonsynonymous","C6L Y35E T63Y E76G A89D",5
"lib1","SARS-CoV-2","TTCGTAGAATGTGTGG",1,22.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5R T63H F134E S139L",4
"lib1","SARS-CoV-2","TTCGTAGGCACAACAG",1,46.19,8.9,-1.86,0.12,2.4,1.09,0.01,">1 nonsynonymous","N4W T15N F156Q",3
"lib1","SARS-CoV-2","TTCGTATAAAAATACT",3,67.88,10.61,-0.15,0.11,2.85,1.09,0,"1 nonsynonymous","E141H",1
"lib1","SARS-CoV-2","TTCGTATACAGTGAGG",4,100.69,10.68,-0.09,0.09,2.89,1.08,0,"1 nonsynonymous","P197S",1
"lib1","SARS-CoV-2","TTCGTATACCAAAAAC",11,93.79,8.73,-2.04,0.11,2.76,1.1,0.01,">1 nonsynonymous","D90E G117H",2
"lib1","SARS-CoV-2","TTCGTATATAAAGTAC",1,35.97,10.7,-0.07,0.07,2.91,1,0,">1 nonsynonymous","N13H D98N",2
"lib1","SARS-CoV-2","TTCGTATCCACAAAAT",5,1.01,NA,NA,NA,NA,NA,NA,"stop","V37I P54I E141*",3
"lib1","SARS-CoV-2","TTCGTATGGATACTTA",8,86.44,10.73,-0.03,0.09,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCGTCAAATACTTCC",7,85.94,9.37,-1.4,0.09,2.77,1.08,0,"1 nonsynonymous","N118L",1
"lib1","SARS-CoV-2","TTCGTCAAGCGTTTAG",3,114.2,10.76,0,0.04,2.94,1.03,0,">1 nonsynonymous","L122W I138T",2
"lib1","SARS-CoV-2","TTCGTCAATGATGGAG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","P7* S45L F126G G174L",4
"lib1","SARS-CoV-2","TTCGTCACAAAAACTT",4,85.69,6,-4.76,2,3,1.17,0,">1 nonsynonymous","C6K T15W Y175L",3
"lib1","SARS-CoV-2","TTCGTCACAGGCACCT",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C V77R K94H E141P L162E",5
"lib1","SARS-CoV-2","TTCGTCAGGCCGCAGA",3,39.61,6,-4.76,2,1.5,1.18,0,">1 nonsynonymous","C6A V32T C102Y K128H S139K",5
"lib1","SARS-CoV-2","TTCGTCATAATTAGAA",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V T63D V103Y G117H I138L",5
"lib1","SARS-CoV-2","TTCGTCATCATACCCA",1,90.88,6,-4.76,2,3,1.21,0,">1 nonsynonymous","A14F N58Y I88A K94D Y175T Y178L",6
"lib1","SARS-CoV-2","TTCGTCCACAGTGTTG",3,49.85,10.64,-0.12,0.09,2.78,1.2,0.01,"1 nonsynonymous","T55N",1
"lib1","SARS-CoV-2","TTCGTCCAGTTAGCAA",2,0.99,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib1","SARS-CoV-2","TTCGTCCCGGGTTTTC",1,24.93,10.21,-0.55,0.04,2.96,1.04,0,">1 nonsynonymous","Y35M G174R",2
"lib1","SARS-CoV-2","TTCGTCGATGCTGTGA",1,63.47,8.7,-2.07,0.18,2.44,1.26,0.01,"1 nonsynonymous","Y91H",1
"lib1","SARS-CoV-2","TTCGTCTTAACTAGTT",2,23.81,6,-4.76,2,3,1.16,0,">1 nonsynonymous","Y35V F99P N118V P149Q T170R",5
"lib1","SARS-CoV-2","TTCGTGAAATCACTAG",8,8.74,NA,NA,NA,NA,NA,NA,"stop","Y50L F134*",2
"lib1","SARS-CoV-2","TTCGTGAGACGGCTAT",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Y C49S P96T V103W L125C P149Y",6
"lib1","SARS-CoV-2","TTCGTGCATGCACTCA",10,213.62,6.18,-4.59,0.64,1.5,1.18,0.01,"1 nonsynonymous","C158W",1
"lib1","SARS-CoV-2","TTCGTGCCACAACCCA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y V71A K94D E141G",4
"lib1","SARS-CoV-2","TTCGTGCTATTTCCGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","V71K V103S Y123C N151*",4
"lib1","SARS-CoV-2","TTCGTGTCCTCCTAGA",4,43.28,6.35,-4.41,1.06,1.5,1.14,0.08,">1 nonsynonymous","R73A G116I F167L T201K",4
"lib1","SARS-CoV-2","TTCGTTAAAATTTAGA",3,22.71,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L5S A22I F44Y T63S K128A R136F P149V C158S V173M Y178F",10
"lib1","SARS-CoV-2","TTCGTTAAATCTCGTT",3,43.24,10.61,-0.16,0.06,2.89,1.09,0,">1 nonsynonymous","N110K N130D",2
"lib1","SARS-CoV-2","TTCGTTAACTGGCGTG",2,44.24,8.18,-2.58,0.23,1.51,1.1,0.02,">1 nonsynonymous","C31F K56T Y119A E186G",4
"lib1","SARS-CoV-2","TTCGTTAATCCTCTAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N30* G117K",2
"lib1","SARS-CoV-2","TTCGTTAGGATAACGC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* A42G Y143A F167V L188F",5
"lib1","SARS-CoV-2","TTCGTTATCGTTATGG",3,69.7,10.19,-0.57,0.06,2.76,1.01,0,">1 nonsynonymous","S41W N64H K94N",3
"lib1","SARS-CoV-2","TTCGTTATGTGAATTA",11,35.01,10.02,-0.75,0.06,2.77,1.01,0,">1 nonsynonymous","Y39M D90S A145S F160T",4
"lib1","SARS-CoV-2","TTCGTTCCACCCCGTG",1,43.17,10.71,-0.06,0.11,2.8,1.12,0,"1 nonsynonymous","T201R",1
"lib1","SARS-CoV-2","TTCGTTCGATAATTAG",4,63.77,10,-0.76,0.1,2.03,1.07,0,">1 nonsynonymous","D34L P149A L188S",3
"lib1","SARS-CoV-2","TTCGTTCGCGTTACTA",7,84.63,9.55,-1.21,0.11,1.79,1.05,0.01,">1 nonsynonymous","E10K L162R",2
"lib1","SARS-CoV-2","TTCGTTGAAATTATAT",7,0.44,NA,NA,NA,NA,NA,NA,"stop","P82C F134*",2
"lib1","SARS-CoV-2","TTCGTTGACACGCAAT",13,1.51,NA,NA,NA,NA,NA,NA,"stop","N1C G155W P197*",3
"lib1","SARS-CoV-2","TTCGTTTCCGGCGAAA",5,34.94,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","C6M L95H G116Y",3
"lib1","SARS-CoV-2","TTCGTTTTAACTTGGA",3,16.12,6,-4.76,2,3,1.1,0,">1 nonsynonymous","N1C E10L S19Y K87V P169H",5
"lib1","SARS-CoV-2","TTCGTTTTAAGCCCTA",7,10.31,NA,NA,NA,NA,NA,NA,"stop","F17A W23* K114N P133W F156Y",5
"lib1","SARS-CoV-2","TTCGTTTTACTAAGAC",2,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D N64S E141C",3
"lib1","SARS-CoV-2","TTCGTTTTTAAAAACA",4,90.56,10.56,-0.2,0.03,2.92,1.01,0,"1 nonsynonymous","N130W",1
"lib1","SARS-CoV-2","TTCTAAAAAATACCAA",9,91.82,10.8,0.03,0.07,2.93,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCTAAAAACGATCAA",4,33.4,6.69,-4.08,0.35,1.5,1.06,0.03,">1 nonsynonymous","F99L A105L R127H E135C F167S",5
"lib1","SARS-CoV-2","TTCTAAAAATTTGGTT",6,98.43,9.44,-1.33,0.1,2.21,1.12,0,"1 nonsynonymous","N107V",1
"lib1","SARS-CoV-2","TTCTAAAACATATGGT",6,40.73,8.88,-1.88,0.4,1.5,1.06,0.08,">1 nonsynonymous","G86R N130I",2
"lib1","SARS-CoV-2","TTCTAAAATACACAGA",4,12.59,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","N40Q P82W F99E K198Q",4
"lib1","SARS-CoV-2","TTCTAAAATATGCCCT",3,39.71,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","C6N T46R S147F R179S",4
"lib1","SARS-CoV-2","TTCTAAACGCGCAGTT",5,91.56,10.58,-0.19,0.05,2.96,1,0,">1 nonsynonymous","L60V N151F",2
"lib1","SARS-CoV-2","TTCTAAACGTGTCCGG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","G86C G155L N171F P177*",4
"lib1","SARS-CoV-2","TTCTAAAGTACGTTTT",3,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N A42Y Y66E N92P F126L",5
"lib1","SARS-CoV-2","TTCTAAATAAACGAAT",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G V181H",2
"lib1","SARS-CoV-2","TTCTAAATAACACCTT",3,8.3,10.38,-0.39,0.08,2.89,1.08,0,">1 nonsynonymous","I28F V182T",2
"lib1","SARS-CoV-2","TTCTAAATAAGAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L57I L95Y K114* G146L V173L",5
"lib1","SARS-CoV-2","TTCTAAATACACACTG",1,24.34,6,-4.76,2,3,1.21,0,">1 nonsynonymous","S69P V103D C150K Y165R Y178T",5
"lib1","SARS-CoV-2","TTCTAAATATCCTTAT",3,37.16,9.69,-1.07,0.09,1.87,1.08,0,">1 nonsynonymous","P82T T201C",2
"lib1","SARS-CoV-2","TTCTAAATCGATAAAA",4,27.76,10.1,-0.66,0.11,2.43,1,0,"1 nonsynonymous","F47S",1
"lib1","SARS-CoV-2","TTCTAACAACGGCATT",10,139.25,10.22,-0.54,0.04,2.91,1.01,0,"1 nonsynonymous","A105Y",1
"lib1","SARS-CoV-2","TTCTAACAGGAACCTA",4,83.01,10.77,0.01,0.07,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTAACATATAATTA",1,13.36,9.83,-0.94,0.25,1.69,1.17,0.03,">1 nonsynonymous","R25E Y175W",2
"lib1","SARS-CoV-2","TTCTAACCATGGCCCA",7,2.64,NA,NA,NA,NA,NA,NA,"stop","S36* K114W T148I",3
"lib1","SARS-CoV-2","TTCTAACCCACTTCAA",1,22,10.59,-0.17,0.12,2.85,1.1,0.01,">1 nonsynonymous","N24T D90S",2
"lib1","SARS-CoV-2","TTCTAACCGTATACGC",11,252.94,10.34,-0.43,0.03,2.85,1.02,0,"1 nonsynonymous","P133D",1
"lib1","SARS-CoV-2","TTCTAACCTGATATAG",4,75.74,10.75,-0.02,0.07,2.8,1.11,0,"1 nonsynonymous","K56A",1
"lib1","SARS-CoV-2","TTCTAACCTTAACCCG",1,15.67,6,-4.76,2,3,1.16,0.01,">1 nonsynonymous","N4E N58L F99L C158Y",4
"lib1","SARS-CoV-2","TTCTAACGACTAACGA",4,12.25,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","F12M A42N G83L Y121L E141S C158R G174L",7
"lib1","SARS-CoV-2","TTCTAACGATTAAACA",2,13.79,11.03,0.27,0.12,2.93,1,0,"1 nonsynonymous","Q144S",1
"lib1","SARS-CoV-2","TTCTAACTCCCAAATA",1,22.48,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1Y V37K F44T N92I R124K P149E T201L",7
"lib1","SARS-CoV-2","TTCTAACTGGACGGAC",7,17.55,6,-4.76,2,3,1.34,0.02,">1 nonsynonymous","N1S K48H K94I E141S",4
"lib1","SARS-CoV-2","TTCTAAGAAACTGATA",3,68.69,10.78,0.02,0.06,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTAAGATAAAAGAG",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M V37S V103M",3
"lib1","SARS-CoV-2","TTCTAAGCACTGCGGT",2,2.82,NA,NA,NA,NA,NA,NA,"stop","C6R C49D L95R L122S E135V P149*",6
"lib1","SARS-CoV-2","TTCTAAGCAGTTATTG",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H D90F",2
"lib1","SARS-CoV-2","TTCTAAGCCAGTCCCC",2,1.18,NA,NA,NA,NA,NA,NA,"stop","C6* N13L A145S",3
"lib1","SARS-CoV-2","TTCTAAGGAATTATAG",7,0.96,NA,NA,NA,NA,NA,NA,"stop","C31Q S53L D112* E135V F156H T201S",6
"lib1","SARS-CoV-2","TTCTAAGGTGCACTGA",1,1.21,NA,NA,NA,NA,NA,NA,"stop","G9* K48N T85V Y123* G146V",5
"lib1","SARS-CoV-2","TTCTAATAAAGACATG",1,32.18,10.35,-0.42,0.06,2.9,1.03,0,"1 nonsynonymous","F62R",1
"lib1","SARS-CoV-2","TTCTAATACGAAGCAA",2,11.35,10.98,0.21,0.18,2.82,1.09,0.01,"1 nonsynonymous","D97A",1
"lib1","SARS-CoV-2","TTCTAATAGGAAACCA",3,10.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5Y A22V S41R F62S Q168L",5
"lib1","SARS-CoV-2","TTCTAATCAAACACAA",4,161.09,10.82,0.05,0.07,2.87,1.05,0,"1 nonsynonymous","A190G",1
"lib1","SARS-CoV-2","TTCTAATCTAAATGGA",1,5.29,NA,NA,NA,NA,NA,NA,"stop","P7G K48*",2
"lib1","SARS-CoV-2","TTCTAATGGCACATCA",6,45.99,10.5,-0.26,0.05,2.85,1.08,0,">1 nonsynonymous","K56I V115W",2
"lib1","SARS-CoV-2","TTCTACAAAATTGTAC",7,60.21,6,-4.76,1.61,1.5,1.17,0.01,">1 nonsynonymous","L5I T46V Y50V A81L N92T",5
"lib1","SARS-CoV-2","TTCTACAAGGACGGTA",3,35.54,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","L5R P149M F167V",3
"lib1","SARS-CoV-2","TTCTACAATTAAACCT",4,38.2,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","S45A A67S G74S G83R",4
"lib1","SARS-CoV-2","TTCTACAATTAAACTA",6,68.35,10.73,-0.03,0.09,2.83,1.06,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","TTCTACACGAACAGAA",6,53.22,10.76,-0.01,0.08,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTACAGAACGAAAG",3,20.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I28S C61N L95A Y119N F156L",5
"lib1","SARS-CoV-2","TTCTACATACTCCAAC",9,18.12,6,-4.76,2,3,1.29,0,">1 nonsynonymous","Y91T F99N F126A",3
"lib1","SARS-CoV-2","TTCTACATCCTATTTA",6,90.06,9.88,-0.89,0.11,1.89,1.06,0,">1 nonsynonymous","D75M T85R Y165L A192T",4
"lib1","SARS-CoV-2","TTCTACATCTCGGGTT",5,6.44,NA,NA,NA,NA,NA,NA,"stop","F62* C102V",2
"lib1","SARS-CoV-2","TTCTACATGATTCTAA",4,16.21,10.17,-0.59,0.25,1.73,1.03,0.04,">1 nonsynonymous","F17A S43L P54T Q163F",4
"lib1","SARS-CoV-2","TTCTACCAGACGGCTA",1,28.06,10.82,0.05,0.06,2.96,1.03,0,">1 nonsynonymous","T55V G146S",2
"lib1","SARS-CoV-2","TTCTACCGAAGTAGAA",1,34.27,10.68,-0.09,0.05,2.93,1.03,0,">1 nonsynonymous","V37F S53F T85A D97S",4
"lib1","SARS-CoV-2","TTCTACCGTTAACCCG",14,162.51,10.32,-0.44,0.04,2.86,1.06,0,">1 nonsynonymous","I28W Y66W Q144V",3
"lib1","SARS-CoV-2","TTCTACCGTTGAATGA",4,76.91,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","G101I L122M E141A",3
"lib1","SARS-CoV-2","TTCTACGATCGTTTCC",6,107.68,8.16,-2.61,0.17,1.81,1.12,0.01,">1 nonsynonymous","S41Y S113P E154I",3
"lib1","SARS-CoV-2","TTCTACGGAGAACCAT",2,20.14,7.02,-3.75,0.47,1.5,1.09,0.05,">1 nonsynonymous","N64I P96Y T100D",3
"lib1","SARS-CoV-2","TTCTACGGCTTACCTC",4,109.81,10.74,-0.03,0.07,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTACGGTACAATAT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* D34W G101L",3
"lib1","SARS-CoV-2","TTCTACGTAGCGTGGA",5,90.74,10.65,-0.12,0.06,2.9,1.01,0,">1 nonsynonymous","K26I N120L",2
"lib1","SARS-CoV-2","TTCTACGTCAATTACC",5,81.02,10.76,-0.01,0.05,2.9,1.05,0,"1 nonsynonymous","P191T",1
"lib1","SARS-CoV-2","TTCTACGTTGAAATCT",5,11.6,6,-4.76,2,1.5,1.13,0.06,">1 nonsynonymous","C6P D98S S113E",3
"lib1","SARS-CoV-2","TTCTACTATTACAAAT",2,34.27,10.79,0.03,0.05,2.92,1.05,0,"1 nonsynonymous","D90K",1
"lib1","SARS-CoV-2","TTCTACTTGACCCAAA",1,11.64,9.92,-0.85,0.09,2.51,1.05,0,">1 nonsynonymous","I104M Y121V",2
"lib1","SARS-CoV-2","TTCTACTTTTTCGGAA",6,54.68,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C6H F70Q R124P F156T",4
"lib1","SARS-CoV-2","TTCTAGAACGCAGATG",4,55.8,10.56,-0.21,0.19,2.48,1.13,0.02,"wildtype","",0
"lib1","SARS-CoV-2","TTCTAGAATATTATCA",4,10.2,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14L V103D Y143F",3
"lib1","SARS-CoV-2","TTCTAGAGAACGAACA",2,50.99,10.49,-0.28,0.05,2.84,1.07,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","TTCTAGAGTAGTTATC",1,18.57,7.32,-3.45,0.55,1.5,1.11,0.07,">1 nonsynonymous","A42S P82L D97F R136K",4
"lib1","SARS-CoV-2","TTCTAGCAACTTGACT",1,22.33,10.8,0.03,0.06,3,1,0,"1 nonsynonymous","I2T",1
"lib1","SARS-CoV-2","TTCTAGCATTATACTT",5,59.38,10.3,-0.47,0.04,2.85,1.08,0,">1 nonsynonymous","A42H T63G G174Q",3
"lib1","SARS-CoV-2","TTCTAGCCAACCGGCT",5,114.89,10.15,-0.61,0.09,2.24,1.02,0,">1 nonsynonymous","N13K L60M A81S",3
"lib1","SARS-CoV-2","TTCTAGCGCCCACATC",5,13.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33N D112V F134M G146R",4
"lib1","SARS-CoV-2","TTCTAGGAGAATAGAC",8,40.94,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T63A I88F V103R",3
"lib1","SARS-CoV-2","TTCTAGGAGCCAACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A89* A105V",2
"lib1","SARS-CoV-2","TTCTAGGCCAAGGGAC",1,20.9,6,-4.76,1.85,1.6,1.23,0.03,">1 nonsynonymous","C6P D34L F44N L162P",4
"lib1","SARS-CoV-2","TTCTAGGCGTACGTTT",2,44.65,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","V77S I88Y G174V",3
"lib1","SARS-CoV-2","TTCTAGGCTACCAATA",5,34.02,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","C61V D90T R179Y",3
"lib1","SARS-CoV-2","TTCTAGGTTGGCCTAG",9,31.62,6.25,-4.51,0.68,1.5,1.17,0.03,">1 nonsynonymous","S41V V52E G116E Y119Q Q144F",5
"lib1","SARS-CoV-2","TTCTAGTAGACGCACT",1,2.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90V",1
"lib1","SARS-CoV-2","TTCTAGTATAAAACAA",11,2.4,NA,NA,NA,NA,NA,NA,"stop","K128Q T140M P149*",3
"lib1","SARS-CoV-2","TTCTAGTATAGAAACG",7,204.07,9.87,-0.89,0.06,2.08,1.05,0,"1 nonsynonymous","L38P",1
"lib1","SARS-CoV-2","TTCTAGTATATAATAG",4,2.9,NA,NA,NA,NA,NA,NA,"stop","Y35* T46V D68A S147V",4
"lib1","SARS-CoV-2","TTCTAGTCCCGACACT",11,41.96,6,-4.76,2,3,1.09,0,">1 nonsynonymous","A14C L57R I80F",3
"lib1","SARS-CoV-2","TTCTATAAATAATCCC",6,71.39,10.75,-0.01,0.06,2.86,1.08,0,">1 nonsynonymous","T3P T55L S129A",3
"lib1","SARS-CoV-2","TTCTATAACCTGGCCG",1,0.46,NA,NA,NA,NA,NA,NA,"stop","S41A A67Y K87Q W106* N130V Q168A",6
"lib1","SARS-CoV-2","TTCTATAACTTTTTAA",6,3.59,NA,NA,NA,NA,NA,NA,"stop","S139* F156M",2
"lib1","SARS-CoV-2","TTCTATAAGTATGCAA",1,21.55,7.98,-2.78,0.28,1.5,1.11,0.03,">1 nonsynonymous","D59N R73P D98S Y119F",4
"lib1","SARS-CoV-2","TTCTATAATCCATTTC",6,22.64,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L38P G51I A81V L122R F156S",5
"lib1","SARS-CoV-2","TTCTATACACAACTAT",6,39.37,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","Y50L D97A F167V",3
"lib1","SARS-CoV-2","TTCTATACCACAGGCC",3,96.03,10.07,-0.69,0.08,2.73,1.01,0,"1 nonsynonymous","C6L",1
"lib1","SARS-CoV-2","TTCTATACCGCCTGTC",3,50.37,10.45,-0.32,0.04,2.89,1.05,0,">1 nonsynonymous","S53R E141F",2
"lib1","SARS-CoV-2","TTCTATACGAGGACAA",2,35.41,9,-1.77,0.14,1.86,1.15,0.01,">1 nonsynonymous","N24W T170A K198V",3
"lib1","SARS-CoV-2","TTCTATACGGAATTTT",4,98.87,10.19,-0.58,0.08,2.71,1,0,"1 nonsynonymous","A14L",1
"lib1","SARS-CoV-2","TTCTATACGGCGCGAA",4,4.23,NA,NA,NA,NA,NA,NA,"stop","A14G A89H P96* P149T",4
"lib1","SARS-CoV-2","TTCTATAGACGTACAT",4,95.91,10.76,0,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTATATAAAAGTCC",3,19.58,9.02,-1.75,0.1,1.96,1.15,0.01,"1 nonsynonymous","Y50L",1
"lib1","SARS-CoV-2","TTCTATATCATGTCCA",2,36.86,10.78,0.01,0.07,2.87,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCTATATCTGCCGAA",1,12.67,10.48,-0.29,0.05,2.97,1,0,"1 nonsynonymous","Q144W",1
"lib1","SARS-CoV-2","TTCTATATGATAAAGC",9,190.64,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","A33E T63A D98V P177N",4
"lib1","SARS-CoV-2","TTCTATCATACGCACT",6,37.1,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","I72G G166S",2
"lib1","SARS-CoV-2","TTCTATCATCTGTAGT",10,91.66,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","F12V N30R P96S W106D N118L",5
"lib1","SARS-CoV-2","TTCTATCCCACCTACA",3,18.32,9,-1.76,0.1,1.87,1.18,0.01,">1 nonsynonymous","C61Y N107R T140R",3
"lib1","SARS-CoV-2","TTCTATCTATGACACC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TTCTATCTCCTCCGTG",1,11.25,8.2,-2.56,0.47,1.5,1,0.06,">1 nonsynonymous","N1E P82A A89T",3
"lib1","SARS-CoV-2","TTCTATCTGTATATCT",10,113.2,9.26,-1.51,0.11,1.7,1.14,0.01,">1 nonsynonymous","F17D V52L P197L",3
"lib1","SARS-CoV-2","TTCTATCTTAGACAGC",8,62.45,8.12,-2.65,0.29,1.5,1.08,0.04,">1 nonsynonymous","N1L F8N G116F T201Y",4
"lib1","SARS-CoV-2","TTCTATCTTTAGGAAG",4,16.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T R136L G146L P161F",4
"lib1","SARS-CoV-2","TTCTATGAGCAAGAAT",4,32.53,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6S I28D K56A I88L",4
"lib1","SARS-CoV-2","TTCTATGCCAGATGAA",3,12.56,6,-4.76,2,1.5,1.28,0.07,">1 nonsynonymous","N13L D90Y P96M A105T N157T",5
"lib1","SARS-CoV-2","TTCTATGCTCATAAAT",4,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L W106L I142W F156Y N171I",5
"lib1","SARS-CoV-2","TTCTATTAAATACGAG",7,87.01,10.83,0.06,0.07,2.94,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTATTCGAACTACG",2,7.31,6,-4.76,2,1.5,1.11,0.03,"1 nonsynonymous","I80W",1
"lib1","SARS-CoV-2","TTCTATTGAATGCAAG",2,29.03,10.69,-0.07,0.04,2.97,1,0,">1 nonsynonymous","P7A S139K",2
"lib1","SARS-CoV-2","TTCTATTTACGTCTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S19M Y35* I138T",3
"lib1","SARS-CoV-2","TTCTCAAAAACATCCG",14,190.68,10.82,0.05,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTCAAAAAGCTCTA",4,82.74,10.08,-0.68,0.06,2.43,1.09,0,">1 nonsynonymous","A33K T148Y",2
"lib1","SARS-CoV-2","TTCTCAAAACACGTCA",1,0.47,NA,NA,NA,NA,NA,NA,"stop","P54* A105V",2
"lib1","SARS-CoV-2","TTCTCAAAACTTGTGT",1,19.43,10.56,-0.21,0.11,2.79,1.19,0.01,"1 nonsynonymous","L60Q",1
"lib1","SARS-CoV-2","TTCTCAAATCAGTATC",4,28.24,10.64,-0.12,0.1,2.97,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTCAACAAAATACC",4,0.15,NA,NA,NA,NA,NA,NA,"stop","L122* S139L S200M",3
"lib1","SARS-CoV-2","TTCTCAACATGCGAAC",3,39.88,10.36,-0.4,0.11,2.53,1.03,0.01,">1 nonsynonymous","S36Y S41H",2
"lib1","SARS-CoV-2","TTCTCAACCATACATA",6,2.3,NA,NA,NA,NA,NA,NA,"stop","P54L E76W K87* I104Y",4
"lib1","SARS-CoV-2","TTCTCAACGATAGAAC",3,4.89,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTCTCAATGACAATTT",3,1.23,NA,NA,NA,NA,NA,NA,"stop","S45W R78V V103* Y143R F185R",5
"lib1","SARS-CoV-2","TTCTCACACGCAGCCG",5,39.6,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","F47Y A105P I142T G152K",4
"lib1","SARS-CoV-2","TTCTCACAGTAGGCCC",2,16.61,10.62,-0.14,0.14,2.73,1.14,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TTCTCACCTGGGTCGG",2,23.76,10.52,-0.24,0.08,2.8,1.12,0,"1 nonsynonymous","D90M",1
"lib1","SARS-CoV-2","TTCTCACGGGTGCACC",5,66.01,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","A89D F99C N130D G174F",4
"lib1","SARS-CoV-2","TTCTCACTGTATACGC",6,20.37,6,-4.76,2,3,1.11,0,">1 nonsynonymous","F17L F99A V173H",3
"lib1","SARS-CoV-2","TTCTCAGAACAAGGGT",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S T63Y F99L V115A N130G",5
"lib1","SARS-CoV-2","TTCTCAGGGTTTATCA",2,18.52,6.13,-4.64,0.62,1.89,1.16,0.01,">1 nonsynonymous","K56F G74P N171T P177K V181M",5
"lib1","SARS-CoV-2","TTCTCAGTACAAGGGT",6,38.58,9.96,-0.8,0.08,2.63,1.01,0,"1 nonsynonymous","N13C",1
"lib1","SARS-CoV-2","TTCTCAGTCGTACATT",6,33.52,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I88F K114P L122N T148Y N151M",5
"lib1","SARS-CoV-2","TTCTCAGTTTCATTAT",2,5.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98Y",1
"lib1","SARS-CoV-2","TTCTCATATCCAGCCT",3,55.3,8.64,-2.13,0.24,1.5,1.13,0.03,">1 nonsynonymous","F12N C31Y",2
"lib1","SARS-CoV-2","TTCTCCACATATACCG",7,155.19,10.07,-0.69,0.06,2.76,1.02,0,">1 nonsynonymous","C6L T201A",2
"lib1","SARS-CoV-2","TTCTCCACCGCACAGT",1,66.12,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","S36A A105K T140I F156N",4
"lib1","SARS-CoV-2","TTCTCCACTATGTATC",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L V153K P161L F167E",4
"lib1","SARS-CoV-2","TTCTCCATTAATCTTG",1,21.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V115W L122S L131H T201D",4
"lib1","SARS-CoV-2","TTCTCCATTTTATAAC",9,91.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I80G G146M N151S S200V",4
"lib1","SARS-CoV-2","TTCTCCCAAAAAAATA",4,48.23,9.76,-1,0.11,1.88,1.03,0.01,">1 nonsynonymous","P82A T201W",2
"lib1","SARS-CoV-2","TTCTCCCAAAAAATAC",3,37.54,10.58,-0.18,0.04,2.99,1,0,"1 nonsynonymous","T46C",1
"lib1","SARS-CoV-2","TTCTCCCAAATTCGCA",1,3.9,NA,NA,NA,NA,NA,NA,"stop","I2P K48R G86E I104* N157E",5
"lib1","SARS-CoV-2","TTCTCCCAAGACCAAT",1,23.54,6.39,-4.38,0.71,1.5,1.17,0.05,">1 nonsynonymous","D34Y N40L L57N D98H",4
"lib1","SARS-CoV-2","TTCTCCCCCTGATGAG",2,0.17,NA,NA,NA,NA,NA,NA,"stop","N92* T100P S129K",3
"lib1","SARS-CoV-2","TTCTCCCTGCAATCGT",1,14.82,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C6N E141R P149F S164Y P177K",5
"lib1","SARS-CoV-2","TTCTCCGACCTCGGAT",2,1677.75,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","Y39T G74L F160L Q168W P177F",5
"lib1","SARS-CoV-2","TTCTCCGTTCGCTCTG",3,17.59,7.07,-3.69,0.17,2.38,1.08,0.01,">1 nonsynonymous","C6I K132R S139N Q144T",4
"lib1","SARS-CoV-2","TTCTCCTGCGGATTGC",12,82.28,9.84,-0.93,0.07,2.43,1.03,0,"1 nonsynonymous","A89N",1
"lib1","SARS-CoV-2","TTCTCGCACAGGCCGT",8,174.04,10.14,-0.62,0.06,2.67,1.02,0,">1 nonsynonymous","R16L F44K",2
"lib1","SARS-CoV-2","TTCTCGCCAAGAGAAC",1,19.83,6.65,-4.11,0.25,1.5,1.09,0.01,">1 nonsynonymous","T100L Y143R Y159M V173S",4
"lib1","SARS-CoV-2","TTCTCGCCCGAGAACC",11,75.1,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F8H L57T Y91L G101Y",4
"lib1","SARS-CoV-2","TTCTCGCGAAGATACA",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56A W106R P169E",3
"lib1","SARS-CoV-2","TTCTCGCTAAAAGATA",7,1.55,NA,NA,NA,NA,NA,NA,"stop","N120T E141*",2
"lib1","SARS-CoV-2","TTCTCGTAAACTTAAC",4,1.54,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib1","SARS-CoV-2","TTCTCGTATCGATACA",5,30.62,10.75,-0.02,0.08,2.93,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTCGTGCCAGTACA",5,40.25,6,-4.76,2,3,1.11,0,">1 nonsynonymous","R73G L95K G116A N130R",4
"lib1","SARS-CoV-2","TTCTCGTTGCCAACAG",8,45.46,7.26,-3.5,0.36,1.5,1.3,0.03,">1 nonsynonymous","G9T L60S F185D",3
"lib1","SARS-CoV-2","TTCTCTAACATACCGT",1,51.63,8.04,-2.72,0.44,1.5,1.06,0.07,">1 nonsynonymous","D97T D112Q P149T V173M",4
"lib1","SARS-CoV-2","TTCTCTAATTCCACAA",7,73.27,6,-4.76,0.97,1.5,1.12,0.01,">1 nonsynonymous","S45M I80G",2
"lib1","SARS-CoV-2","TTCTCTACTAAAGACT",2,28.05,8.89,-1.88,0.17,1.9,1.13,0.01,">1 nonsynonymous","S41I Y91W D98L",3
"lib1","SARS-CoV-2","TTCTCTAGATGTAGAG",4,36.17,8.31,-2.46,0.19,1.78,1.06,0.01,">1 nonsynonymous","V11N F126K",2
"lib1","SARS-CoV-2","TTCTCTATACGTCGAT",6,59.63,9.88,-0.88,0.07,2.46,1.04,0,">1 nonsynonymous","N40L L60S I104F E141G G152H",5
"lib1","SARS-CoV-2","TTCTCTCCAACCAGAG",6,26.19,10.83,0.06,0.08,2.9,1.07,0,"1 nonsynonymous","T55M",1
"lib1","SARS-CoV-2","TTCTCTCTCGTACGAC",1,8.79,10.42,-0.35,0.09,2.73,1.19,0,">1 nonsynonymous","V37S T55F",2
"lib1","SARS-CoV-2","TTCTCTGAAATATTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35S N107S Y175*",3
"lib1","SARS-CoV-2","TTCTCTGAACTTCCGG",1,13.89,6,-4.76,0.95,2.03,1.17,0.01,">1 nonsynonymous","T3L N64I C150G",3
"lib1","SARS-CoV-2","TTCTCTTAAGAACGAT",4,0.39,NA,NA,NA,NA,NA,NA,"stop","I88N S129L C158Y T170S Q176*",5
"lib1","SARS-CoV-2","TTCTCTTATAACTCAC",2,51.12,10.77,0,0.07,2.83,1.12,0,">1 nonsynonymous","Y39E P197S",2
"lib1","SARS-CoV-2","TTCTCTTATACAATGA",1,10.31,9.28,-1.48,0.24,1.89,1.08,0.03,">1 nonsynonymous","N30I G174W",2
"lib1","SARS-CoV-2","TTCTCTTGTTATGGAT",7,122.93,8.65,-2.12,0.12,1.94,1.1,0.01,"1 nonsynonymous","Y165T",1
"lib1","SARS-CoV-2","TTCTCTTGTTTAGCCA",8,88.76,7.74,-3.03,0.18,1.5,1.14,0.01,">1 nonsynonymous","N64L F160S V181F",3
"lib1","SARS-CoV-2","TTCTCTTTCTTTGCCA",3,105.5,10.34,-0.42,0.04,2.88,1.04,0,">1 nonsynonymous","G9C P149Q",2
"lib1","SARS-CoV-2","TTCTGAAAAATAAAAA",1,8.49,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","N1M A14V A33T S108P Y121S Y175Q P177L",7
"lib1","SARS-CoV-2","TTCTGAAAACGCGATT",1,19.18,10.45,-0.32,0.12,2.7,1.02,0.01,">1 nonsynonymous","T15R T63G",2
"lib1","SARS-CoV-2","TTCTGAAAACTGAACG",4,4.23,NA,NA,NA,NA,NA,NA,"stop","F8* L122F S129D P149R T201I",5
"lib1","SARS-CoV-2","TTCTGAAAATCGAGTT",4,28.37,8.7,-2.06,0.36,1.5,1,0.07,">1 nonsynonymous","N1D L38G N92R G152C P191I",5
"lib1","SARS-CoV-2","TTCTGAAACGCAGGGA",3,27.53,7.03,-3.73,0.6,1.66,1.23,0.06,">1 nonsynonymous","C6G S36Y D112R G152T P169S",5
"lib1","SARS-CoV-2","TTCTGAAACTCGGGAA",3,101.22,10.55,-0.21,0.05,2.92,1,0,"1 nonsynonymous","Y66H",1
"lib1","SARS-CoV-2","TTCTGAAAGAAGTAAA",1,25.8,6,-4.76,1.26,1.5,1.08,0.02,">1 nonsynonymous","G51K G86P",2
"lib1","SARS-CoV-2","TTCTGAACAAAGTTAG",4,50.9,10.75,-0.01,0.12,2.77,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTGAACACCCACCT",6,40.8,10.68,-0.08,0.09,2.85,1,0,"1 nonsynonymous","F44T",1
"lib1","SARS-CoV-2","TTCTGAACGCTGGCAT",3,59.8,10.22,-0.54,0.07,2.68,1,0,">1 nonsynonymous","R16M K26L S41G",3
"lib1","SARS-CoV-2","TTCTGAAGATTCTCCG",3,16.59,6,-4.76,2,1.5,1.06,0,">1 nonsynonymous","F99C S129P T170F",3
"lib1","SARS-CoV-2","TTCTGAAGCCCCGCAA",7,90.34,9.98,-0.78,0.09,2.61,1.03,0,">1 nonsynonymous","I28L Y91S",2
"lib1","SARS-CoV-2","TTCTGAATAAAGTGTG",5,108.36,10.62,-0.15,0.04,2.86,1.04,0,"1 nonsynonymous","F44M",1
"lib1","SARS-CoV-2","TTCTGAATGAACCCAC",4,20.93,9.82,-0.94,0.31,1.69,1,0.04,">1 nonsynonymous","K48W Y91N",2
"lib1","SARS-CoV-2","TTCTGAATGTGATTAC",2,319.46,10.75,-0.02,0.06,2.87,1.09,0,"1 nonsynonymous","I2L",1
"lib1","SARS-CoV-2","TTCTGACCAGTAAGAG",5,1.56,NA,NA,NA,NA,NA,NA,"stop","T55I G86L Y91* T100L G146P",5
"lib1","SARS-CoV-2","TTCTGACGATAAGAAT",6,61.78,10.8,0.03,0.08,2.87,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTGACTCATGTCAA",1,10.79,10.75,-0.02,0.12,2.95,1.07,0,"1 nonsynonymous","S53Y",1
"lib1","SARS-CoV-2","TTCTGAGAGAAAACAC",7,31.17,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D68K A81P D112L P133R F156C",5
"lib1","SARS-CoV-2","TTCTGAGCATGAAATA",2,20.96,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C31F L95Q F126Y K132R",4
"lib1","SARS-CoV-2","TTCTGATAATTTCTCA",2,50.64,10.76,0,0.06,2.96,1.02,0,"synonymous","",0
"lib1","SARS-CoV-2","TTCTGATACAAAAATA",5,65.82,6.73,-4.03,0.44,1.5,1.21,0.03,">1 nonsynonymous","E10R D59A V115I P161K K198G",5
"lib1","SARS-CoV-2","TTCTGATATATTCACT",7,22.62,6.65,-4.12,0.48,1.5,1.13,0.03,">1 nonsynonymous","Y50S T55L V173G G196W",4
"lib1","SARS-CoV-2","TTCTGATATCGACAAT",1,0.76,NA,NA,NA,NA,NA,NA,"stop","T3* A89F F99L",3
"lib1","SARS-CoV-2","TTCTGATCACCCCAAT",2,23.26,10.68,-0.09,0.15,2.97,1.02,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTCTGCAAAACTAACG",4,59.88,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","D68V F167N P197T",3
"lib1","SARS-CoV-2","TTCTGCAAACCATACT",6,58.51,10.73,-0.03,0.08,2.92,1.04,0,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","TTCTGCAAACGCATAT",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M S19F T55F",3
"lib1","SARS-CoV-2","TTCTGCAACGAAACAA",7,5.16,NA,NA,NA,NA,NA,NA,"stop","R16* S43H",2
"lib1","SARS-CoV-2","TTCTGCAATAACATGC",1,24.78,10.11,-0.65,0.1,2.58,1.07,0.01,"1 nonsynonymous","D90I",1
"lib1","SARS-CoV-2","TTCTGCACAATGAGGT",3,10.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","E10V A18T V52C V103K G116E",5
"lib1","SARS-CoV-2","TTCTGCAGAGTCCGCA",3,33.4,10.23,-0.54,0.09,2.63,1.03,0,">1 nonsynonymous","N1Y E10L",2
"lib1","SARS-CoV-2","TTCTGCAGCTAACGCA",6,16.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15I Y165S",2
"lib1","SARS-CoV-2","TTCTGCAGGCCAGTGT",1,27.42,10.13,-0.63,0.15,2.81,1,0.01,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","TTCTGCATAACCTATA",2,23.29,10.23,-0.53,0.09,2.96,1.02,0,">1 nonsynonymous","T15R K87L",2
"lib1","SARS-CoV-2","TTCTGCATCAATAAGG",6,57.42,9.7,-1.06,0.1,1.94,1.1,0,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","TTCTGCATTCCCAAAA",1,30.65,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","G74I T100N G116W P161H F167S",5
"lib1","SARS-CoV-2","TTCTGCCATGAATTAA",9,34.58,7.09,-3.68,0.47,1.5,1.03,0.04,">1 nonsynonymous","C61S P82L T100P W106L Y143T",5
"lib1","SARS-CoV-2","TTCTGCCCCGAATGAA",2,56,10.15,-0.61,0.04,2.86,1.09,0,"1 nonsynonymous","D59P",1
"lib1","SARS-CoV-2","TTCTGCGAGGAATGAA",3,7.18,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G9S K56F G83I K94A",4
"lib1","SARS-CoV-2","TTCTGCGCAAAAAATT",1,20.66,10.94,0.17,0.07,2.96,1,0,"1 nonsynonymous","V37L",1
"lib1","SARS-CoV-2","TTCTGCGCCGCCGTGA",1,64.64,10.78,0.01,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTGCGGAAAGAATC",3,57.77,9.75,-1.01,0.06,2.11,1.06,0,">1 nonsynonymous","R27H Y35M S43L G51N T63S S69L K114N I138L",8
"lib1","SARS-CoV-2","TTCTGCTTAGCTCATT",6,17.61,10.26,-0.5,0.02,2.95,1,0,">1 nonsynonymous","K87R S139N F160T Q168R",4
"lib1","SARS-CoV-2","TTCTGGAATCCAACCT",1,9.93,7.79,-2.97,0.29,1.5,1.11,0.03,">1 nonsynonymous","S139V Y175C E186N",3
"lib1","SARS-CoV-2","TTCTGGACAAAGCTAA",3,45.08,10.63,-0.13,0.09,2.88,1.09,0.01,"synonymous","",0
"lib1","SARS-CoV-2","TTCTGGAGAGAAATTT",3,37.52,10.72,-0.05,0.06,2.87,1.09,0,"1 nonsynonymous","R16T",1
"lib1","SARS-CoV-2","TTCTGGAGATGGTGAA",2,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S S69I T85E D90V W106D Y143V G174Y",7
"lib1","SARS-CoV-2","TTCTGGATTAAAGTAA",4,1.31,NA,NA,NA,NA,NA,NA,"stop","N64* C102F G116I F126I",4
"lib1","SARS-CoV-2","TTCTGGCAATTAATGA",3,16.3,6,-4.76,2,1.5,1.17,0.05,">1 nonsynonymous","C6S V20M Y39A Y93S I104R T148P",6
"lib1","SARS-CoV-2","TTCTGGCGCCGCCAGG",2,17.23,10.53,-0.24,0.06,2.93,1.05,0,">1 nonsynonymous","S41L P149V",2
"lib1","SARS-CoV-2","TTCTGGCGGACTGTTA",7,2.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90N",1
"lib1","SARS-CoV-2","TTCTGGCGTAAGCATA",1,2,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTCTGGCGTATAACCG",4,27.58,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","F8H C31V Y143G",3
"lib1","SARS-CoV-2","TTCTGGCTAGAAGTGC",8,106.3,10.22,-0.55,0.1,2.47,1,0,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","TTCTGGCTTCGGAACA",7,31.66,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y35M Y50I G83N G155M V181H",5
"lib1","SARS-CoV-2","TTCTGGGAATACAAAA",5,28.51,6.48,-4.28,0.42,2.61,1.2,0.01,">1 nonsynonymous","N4F S19L S43M D90P S139D G146L F156V",7
"lib1","SARS-CoV-2","TTCTGGGCGATAATGG",3,52.44,7.98,-2.79,0.24,1.76,1.24,0.02,"1 nonsynonymous","D112S",1
"lib1","SARS-CoV-2","TTCTGGTACTCTGGGA",7,1878.45,9.52,-1.24,0.05,2.81,1.09,0,"1 nonsynonymous","S113C",1
"lib1","SARS-CoV-2","TTCTGGTAGAGAAAAA",4,94.99,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2V N92W Q176R",3
"lib1","SARS-CoV-2","TTCTGGTAGGATGTGT",15,2.53,NA,NA,NA,NA,NA,NA,"stop","F134N I142M N151*",3
"lib1","SARS-CoV-2","TTCTGGTCGATCTCCG",3,43.88,9,-1.76,0.17,1.5,1.15,0.01,">1 nonsynonymous","W23V R136V",2
"lib1","SARS-CoV-2","TTCTGGTGACAACAGG",4,0.57,NA,NA,NA,NA,NA,NA,"stop","I2L F12G C31* S45R C158S",5
"lib1","SARS-CoV-2","TTCTGGTGCACAGGTC",7,25.13,9.1,-1.67,0.35,1.5,1,0.07,">1 nonsynonymous","T3M Y35P P96I C102M",4
"lib1","SARS-CoV-2","TTCTGGTTAAGTAGGT",2,9.63,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","T46K G74A D137S F160H N171R",5
"lib1","SARS-CoV-2","TTCTGGTTCGAAGAAG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32S C49L G117R",3
"lib1","SARS-CoV-2","TTCTGTAAAGTAAAAT",6,20.65,7.82,-2.94,0.43,1.5,1,0.08,">1 nonsynonymous","Y50D L60S A81T F134H",4
"lib1","SARS-CoV-2","TTCTGTAAATCTGGCC",3,0.48,NA,NA,NA,NA,NA,NA,"stop","I2V L38* D68I T85R D90F R136S G146M T170N",8
"lib1","SARS-CoV-2","TTCTGTAACGATGCGA",3,7.09,10.19,-0.58,0.34,2.36,1.12,0.02,">1 nonsynonymous","F99M G116R",2
"lib1","SARS-CoV-2","TTCTGTACTGCGAAAT",7,90.62,6,-4.76,1.45,1.5,1.24,0.03,">1 nonsynonymous","N40H A105K E141Y",3
"lib1","SARS-CoV-2","TTCTGTCACCTATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* N64K",2
"lib1","SARS-CoV-2","TTCTGTCCATTTATTA",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S P54T Q144L",3
"lib1","SARS-CoV-2","TTCTGTCCTTTTTGAA",3,33.28,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12L C49R",2
"lib1","SARS-CoV-2","TTCTGTGACTAATTCA",3,41.98,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","V20G T46A Y123L E141Q",4
"lib1","SARS-CoV-2","TTCTTAAAAATTATCA",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C E135Y",2
"lib1","SARS-CoV-2","TTCTTAAAATCACGCT",1,21.2,7.91,-2.86,0.3,1.5,1.14,0.03,">1 nonsynonymous","D90F R136E",2
"lib1","SARS-CoV-2","TTCTTAAACAAACAGT",8,168.87,9.04,-1.72,0.13,1.61,1.15,0.01,">1 nonsynonymous","F99L Y178V",2
"lib1","SARS-CoV-2","TTCTTAAACAAAGTCC",6,79.51,9.7,-1.06,0.13,1.86,1.13,0.01,">1 nonsynonymous","A18K F134L E141M Q163T",4
"lib1","SARS-CoV-2","TTCTTAAAGGCATCAT",2,77.77,9.89,-0.88,0.09,2.27,1.01,0,">1 nonsynonymous","F8E T15F",2
"lib1","SARS-CoV-2","TTCTTAAATTGGTAAG",6,144.04,10.52,-0.24,0.06,2.91,1.02,0,"1 nonsynonymous","E186V",1
"lib1","SARS-CoV-2","TTCTTAAGGCACGAGT",2,21.65,9.54,-1.23,0.19,1.93,1.01,0.01,">1 nonsynonymous","C6I A67F",2
"lib1","SARS-CoV-2","TTCTTAATATCATAGT",9,39.49,7.1,-3.67,0.42,1.5,1.15,0.04,">1 nonsynonymous","T55I A89S Y165Q",3
"lib1","SARS-CoV-2","TTCTTAATCCCATGAA",10,94.5,6.46,-4.31,0.23,1.6,1.15,0,">1 nonsynonymous","V32E D68L T201A",3
"lib1","SARS-CoV-2","TTCTTACAGTCGACCT",1,2.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7E",1
"lib1","SARS-CoV-2","TTCTTACATTATAAGA",11,88.39,6,-4.76,0.81,1.5,1.16,0.01,">1 nonsynonymous","S36R T63I Y91R G116A S139G A145M P161F",7
"lib1","SARS-CoV-2","TTCTTACCTTATAAGG",20,188.27,9.74,-1.03,0.09,1.94,1.09,0,">1 nonsynonymous","N120V S139I S200K",3
"lib1","SARS-CoV-2","TTCTTACGTAATCTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","G174H T201*",2
"lib1","SARS-CoV-2","TTCTTACTAAGCGAGA",2,32.44,6,-4.76,0.93,3,1.11,0.01,">1 nonsynonymous","V11Y I80L A89V K94C G101L S113R S147T A192D",8
"lib1","SARS-CoV-2","TTCTTACTGAATACCA",6,63.17,9.35,-1.42,0.14,1.71,1.14,0.01,">1 nonsynonymous","F8V S69L V173L A190E T201V",5
"lib1","SARS-CoV-2","TTCTTAGATATTGTGG",2,23.86,6,-4.76,1.96,1.5,1.37,0.05,">1 nonsynonymous","T100V D112P",2
"lib1","SARS-CoV-2","TTCTTAGCTCAGTCCC",7,46.95,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S41E K94L K114R D137P G196V",5
"lib1","SARS-CoV-2","TTCTTAGCTCTGTCTT",1,58.18,9.04,-1.73,0.11,2.15,1.16,0,">1 nonsynonymous","K87I D112V S164G",3
"lib1","SARS-CoV-2","TTCTTAGGAAACCAAC",17,169.25,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35Q D112I Y123G C158K",4
"lib1","SARS-CoV-2","TTCTTATACCGACTGT",2,40.17,10.66,-0.1,0.07,2.97,1,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TTCTTATATAGGTCTT",2,198.09,10.74,-0.02,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTTATGATATGAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Y L95K G117V",3
"lib1","SARS-CoV-2","TTCTTATGGCAAAGTT",1,9.22,8.84,-1.92,0.26,1.99,1.21,0.03,">1 nonsynonymous","C6S A14S A33S F126L",4
"lib1","SARS-CoV-2","TTCTTATGTGTATGGT",4,45.65,10.68,-0.09,0.08,2.89,1.06,0,"1 nonsynonymous","T85V",1
"lib1","SARS-CoV-2","TTCTTATTAAGAACAT",3,45.28,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V20A N40S T46N L131M I138C",5
"lib1","SARS-CoV-2","TTCTTATTCACCTAAA",1,13.6,6,-4.76,1.69,1.61,1.22,0.03,">1 nonsynonymous","F99L F167I",2
"lib1","SARS-CoV-2","TTCTTATTCTAATACA",5,75.93,10.33,-0.43,0.05,2.93,1,0,">1 nonsynonymous","S41A T85C",2
"lib1","SARS-CoV-2","TTCTTATTGAGAGTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","E76V V103M R136*",3
"lib1","SARS-CoV-2","TTCTTCAAGAACAACT",3,71.22,10.51,-0.26,0.07,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTCTTCACAAACTGGT",3,78.93,10.1,-0.66,0.06,2.87,1,0,"1 nonsynonymous","F156T",1
"lib1","SARS-CoV-2","TTCTTCATAGAAATTC",3,59.05,10.55,-0.21,0.04,2.93,1,0,">1 nonsynonymous","V37K E141W",2
"lib1","SARS-CoV-2","TTCTTCCACGCATGCT",3,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100Q G146V",2
"lib1","SARS-CoV-2","TTCTTCCATATGCAAT",3,19.64,10.82,0.05,0.07,2.88,1.07,0,">1 nonsynonymous","G152D T201A",2
"lib1","SARS-CoV-2","TTCTTCGAGTAAAACA",1,54.97,10.14,-0.62,0.07,2.71,1.03,0,">1 nonsynonymous","D97V K128V T140I",3
"lib1","SARS-CoV-2","TTCTTCGCAAAACTCG",8,36.9,6.08,-4.69,1.07,1.5,1.23,0.03,">1 nonsynonymous","D34P K87E G152Y N171R",4
"lib1","SARS-CoV-2","TTCTTCGTGGACACAT",9,0.28,NA,NA,NA,NA,NA,NA,"stop","R16S V37F F70W S129E Y143*",5
"lib1","SARS-CoV-2","TTCTTGAAGCGATAAA",9,240.45,10.18,-0.58,0.06,2.59,1.04,0,">1 nonsynonymous","S36E W106Q N130R V153G",4
"lib1","SARS-CoV-2","TTCTTGACAAACGATG",3,14.87,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V20R T55R Q84K G86F E135L L187T",6
"lib1","SARS-CoV-2","TTCTTGACCTCCTCCA",1,32.11,8.47,-2.29,0.4,1.5,1,0.08,">1 nonsynonymous","S19Q G51N P133T",3
"lib1","SARS-CoV-2","TTCTTGATACTAAATA",3,108.09,10.69,-0.07,0.06,2.88,1.03,0,">1 nonsynonymous","S41P D59E",2
"lib1","SARS-CoV-2","TTCTTGCCAAAACGCT",2,24.18,8.1,-2.66,0.1,2.41,1.16,0,">1 nonsynonymous","R16T N157V",2
"lib1","SARS-CoV-2","TTCTTGCCGCTAACAC",8,101.33,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","T55G C61Q C158L",3
"lib1","SARS-CoV-2","TTCTTGCTAAGAGTAG",9,173.51,10.73,-0.03,0.04,2.92,1.03,0,"1 nonsynonymous","K128T",1
"lib1","SARS-CoV-2","TTCTTGGCATCAATGG",2,14.71,6.7,-4.06,0.52,1.5,1.12,0.04,">1 nonsynonymous","R16W R25M N64G",3
"lib1","SARS-CoV-2","TTCTTGGCCCACAACC",1,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P D97Y E135V G155L Q168L L183Q",6
"lib1","SARS-CoV-2","TTCTTGTCTCCCCGCA",3,32.66,10.48,-0.28,0.07,2.82,1,0,"1 nonsynonymous","S108C",1
"lib1","SARS-CoV-2","TTCTTTAAATACTAGT",2,46.39,10.31,-0.46,0.06,2.81,1,0,">1 nonsynonymous","S41K G83A",2
"lib1","SARS-CoV-2","TTCTTTAAATTTCATT",3,15.24,8.52,-2.24,0.22,1.5,1,0.04,"1 nonsynonymous","R25Y",1
"lib1","SARS-CoV-2","TTCTTTACAAGACGGG",5,150.52,9.93,-0.84,0.06,2.75,1.03,0,">1 nonsynonymous","C61L N107P",2
"lib1","SARS-CoV-2","TTCTTTACTTCATGGC",1,5.68,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L57D A105L P149W C158S",4
"lib1","SARS-CoV-2","TTCTTTAGCATAACGA",1,11.45,6.29,-4.47,0.76,1.5,1.18,0.03,">1 nonsynonymous","L5S D137L N151H",3
"lib1","SARS-CoV-2","TTCTTTAGTAAGCTTG",4,0,NA,NA,NA,NA,NA,NA,"stop","T15* D59G T100M G152L R179W L183F K198*",7
"lib1","SARS-CoV-2","TTCTTTCCCTTGACAC",3,11.78,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R27Y A33F N58G Y91T T100P S147T T201D",7
"lib1","SARS-CoV-2","TTCTTTCGAAGGACAT",3,1.07,NA,NA,NA,NA,NA,NA,"stop","F17* V77A",2
"lib1","SARS-CoV-2","TTCTTTCGTGATAAGT",8,153.63,10.37,-0.39,0.04,2.89,1.02,0,">1 nonsynonymous","A22D D98V",2
"lib1","SARS-CoV-2","TTCTTTCTTAACAGGA",2,80.96,10.12,-0.65,0.1,2.78,1,0,">1 nonsynonymous","V37Y G83D K114M",3
"lib1","SARS-CoV-2","TTCTTTGAAAACAGAA",2,36.39,10.78,0.01,0.07,2.94,1.01,0,"1 nonsynonymous","R27L",1
"lib1","SARS-CoV-2","TTCTTTGTACGCTTCA",10,99.92,10.13,-0.64,0.07,2.61,1.02,0,">1 nonsynonymous","D34N G51S K198Q",3
"lib1","SARS-CoV-2","TTCTTTTGTAAATGGG",3,25.5,9.22,-1.55,0.17,1.5,1.07,0.02,">1 nonsynonymous","N13S N40H T85N A105Y",4
"lib1","SARS-CoV-2","TTCTTTTGTACTCGAC",2,10.41,6,-4.76,2,1.5,1.13,0.04,">1 nonsynonymous","R27C L38G E76V K94E N107H",5
"lib1","SARS-CoV-2","TTGAAAAAACCCAAAA",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55D N118G",2
"lib1","SARS-CoV-2","TTGAAAAACTGCCAGA",3,63.57,10.49,-0.27,0.07,2.87,1.09,0,"1 nonsynonymous","P149I",1
"lib1","SARS-CoV-2","TTGAAAAAGAAAGAAA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R T100N A105T",3
"lib1","SARS-CoV-2","TTGAAAAAGTAATGGG",3,9.91,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F12M N64L D98A D112W F156K K199S",6
"lib1","SARS-CoV-2","TTGAAAAATAATAGCA",8,1.2,NA,NA,NA,NA,NA,NA,"stop","G9M Q84* W106K Y119L",4
"lib1","SARS-CoV-2","TTGAAAAATATTTTTC",1,7.31,10.04,-0.72,0.21,2.34,1,0.02,">1 nonsynonymous","F12W A22K",2
"lib1","SARS-CoV-2","TTGAAAAATGTCAACG",2,16.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56C K128M F185A",3
"lib1","SARS-CoV-2","TTGAAAAATTTCGATT",4,16.78,7.98,-2.79,0.4,1.5,1,0.05,">1 nonsynonymous","P82V L122E G152Y",3
"lib1","SARS-CoV-2","TTGAAAACAAGCACTG",2,100.1,8.77,-1.99,0.08,2.78,1.18,0,">1 nonsynonymous","I2Q A33P V65L K87R G174I T201P",6
"lib1","SARS-CoV-2","TTGAAAACCTCAAATC",8,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M F17W K114H E141H",4
"lib1","SARS-CoV-2","TTGAAAACGGATATTG",2,130.16,10.8,0.03,0.06,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGAAAAGACAATAAA",1,8.7,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F12L C61L E135K I138P G174M",5
"lib1","SARS-CoV-2","TTGAAAAGGCAGAGAA",6,130.41,10.73,-0.04,0.05,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAAAAGTAATAGAC",1,24.45,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","I2D I80T F99N W106R T140L P161L",6
"lib1","SARS-CoV-2","TTGAAAATAAAACATT",9,43.2,9.94,-0.82,0.06,2.13,1.06,0,">1 nonsynonymous","S45G F134T F160R",3
"lib1","SARS-CoV-2","TTGAAAATATTAGAAA",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I Y119I D137R",3
"lib1","SARS-CoV-2","TTGAAAATCCAACTTC",6,92.82,10.66,-0.1,0.09,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAAAATCCTAACTT",6,81.74,10.24,-0.52,0.05,2.9,1,0,">1 nonsynonymous","E10D Y35C E154S",3
"lib1","SARS-CoV-2","TTGAAAATGAAACGAC",1,13.98,10.39,-0.37,0.05,2.87,1.08,0,">1 nonsynonymous","I2A E154M",2
"lib1","SARS-CoV-2","TTGAAACAAAGTCTTG",2,18.17,8.58,-2.19,0.2,1.7,1.11,0.02,">1 nonsynonymous","V32W T100F W106R H189V K198T",5
"lib1","SARS-CoV-2","TTGAAACAAGACGGTT",2,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S K94M T140W Y175D",4
"lib1","SARS-CoV-2","TTGAAACAATCAACAA",4,31.99,9.86,-0.9,0.13,2.17,1.09,0.01,">1 nonsynonymous","Y123I S164M",2
"lib1","SARS-CoV-2","TTGAAACAGACGTTCC",8,64.94,10.77,0,0.04,2.95,1.02,0,">1 nonsynonymous","T3H D90N",2
"lib1","SARS-CoV-2","TTGAAACAGCGGAGTC",1,14.77,8.92,-1.84,0.19,2.11,1.23,0.01,">1 nonsynonymous","C31N A42G A81C",3
"lib1","SARS-CoV-2","TTGAAACAGTGGTCAC",12,267.65,10.22,-0.54,0.05,2.89,1,0,">1 nonsynonymous","Y35S F160P",2
"lib1","SARS-CoV-2","TTGAAACAGTTGAACT",7,3.94,NA,NA,NA,NA,NA,NA,"stop","R16T K26R L95S Y121*",4
"lib1","SARS-CoV-2","TTGAAACCATGATAAA",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39M I104K Y159A",3
"lib1","SARS-CoV-2","TTGAAACCTACGATTA",1,21.06,8.47,-2.3,0.19,2.09,1.13,0.02,"1 nonsynonymous","Y165A",1
"lib1","SARS-CoV-2","TTGAAACCTGAGCACA",1,33.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","S41P C49P",2
"lib1","SARS-CoV-2","TTGAAACGCTCCACTT",4,63.46,9.57,-1.19,0.1,2.67,1.06,0,">1 nonsynonymous","T46F N151I G174H P197T",4
"lib1","SARS-CoV-2","TTGAAACGTGCTAGTT",1,93.89,10.11,-0.66,0.07,2.75,1.06,0,">1 nonsynonymous","A42I G83R A105W H189P",4
"lib1","SARS-CoV-2","TTGAAAGAACTGATCA",3,41.97,6.67,-4.09,0.29,1.5,1.16,0.01,">1 nonsynonymous","C61L N107S Q144I",3
"lib1","SARS-CoV-2","TTGAAAGACGCTTGAT",1,38.21,9.79,-0.98,0.15,2.35,1.04,0.01,">1 nonsynonymous","N4S F44V D98C K199T",4
"lib1","SARS-CoV-2","TTGAAAGAGAAGTAAC",1,8.47,6.86,-3.91,0.47,1.5,1.07,0.02,">1 nonsynonymous","T55W P82S G86Y G174C",4
"lib1","SARS-CoV-2","TTGAAAGAGTGAACTA",1,12.75,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F47Y P96Q V194A",3
"lib1","SARS-CoV-2","TTGAAAGATCAACCCC",4,13.79,6.14,-4.62,0.99,1.5,1.14,0.03,">1 nonsynonymous","A14C V103P Y119V P133E Y175M F185L",6
"lib1","SARS-CoV-2","TTGAAAGCAAACAGTT",4,54.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","D59S F62R Y93Q C150F G172K",5
"lib1","SARS-CoV-2","TTGAAAGCCCTCCTAG",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T V103N G116S G146A C158F",5
"lib1","SARS-CoV-2","TTGAAAGCTGACTGAG",5,148.47,10.88,0.12,0.08,2.88,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAAAGGGCCATGGA",4,70.21,9.56,-1.2,0.09,2.15,1.06,0,">1 nonsynonymous","Y21L Q84V V173I",3
"lib1","SARS-CoV-2","TTGAAAGGTAACGTAA",8,9.88,NA,NA,NA,NA,NA,NA,"stop","Y121I Q168E T201*",3
"lib1","SARS-CoV-2","TTGAAAGTCACAGTAA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","N64Q K198*",2
"lib1","SARS-CoV-2","TTGAAAGTCCTCACCC",9,79.23,10.66,-0.1,0.07,2.9,1.03,0,">1 nonsynonymous","G9E S41F N120G L188P",4
"lib1","SARS-CoV-2","TTGAAAGTGGGCTAAT",6,103.65,10.64,-0.12,0.06,2.87,1.06,0,"1 nonsynonymous","P169T",1
"lib1","SARS-CoV-2","TTGAAAGTTAACGATT",3,12.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S Q84L Y119S",3
"lib1","SARS-CoV-2","TTGAAAGTTCCTTTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R G86R F99Y P161G",4
"lib1","SARS-CoV-2","TTGAAATATGAAAACC",3,20.42,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","V65R G74V V173R R179I",4
"lib1","SARS-CoV-2","TTGAAATCACATAGAA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R Y35I E141W",3
"lib1","SARS-CoV-2","TTGAAATCACGCTAGA",1,54.95,8.01,-2.76,0.42,1.5,1,0.06,">1 nonsynonymous","S29C S41K R136T G155A",4
"lib1","SARS-CoV-2","TTGAAATGATATAATA",5,26.01,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N4L K48Y C61R A81P C102G N157K",6
"lib1","SARS-CoV-2","TTGAAATTATAGTTAA",16,4.8,NA,NA,NA,NA,NA,NA,"stop","D34S Y50* V77M T170* Q176F",5
"lib1","SARS-CoV-2","TTGAAATTGTGGGCAA",3,55.31,7.62,-3.14,0.25,1.5,1.14,0.02,">1 nonsynonymous","F47S G117Q",2
"lib1","SARS-CoV-2","TTGAAATTTCCTATCA",5,53.66,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","Y50I A105N R179T",3
"lib1","SARS-CoV-2","TTGAACAAACATGGTG",15,226.6,10.63,-0.14,0.03,2.92,1.03,0,"1 nonsynonymous","N120W",1
"lib1","SARS-CoV-2","TTGAACAAATGAATTA",2,39.56,10.65,-0.11,0.07,2.9,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGAACAACGTCCCTA",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90F D97W S113R",3
"lib1","SARS-CoV-2","TTGAACAAGTAGCAAC",18,140.22,10.3,-0.47,0.07,2.79,1.01,0,">1 nonsynonymous","V37E W106M",2
"lib1","SARS-CoV-2","TTGAACAAGTTGATTG",4,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R C31Y V103L A145S Y178P",5
"lib1","SARS-CoV-2","TTGAACAATAAGAAAT",14,160.83,10.31,-0.46,0.06,2.91,1.02,0,">1 nonsynonymous","N4Y L5P Y121I",3
"lib1","SARS-CoV-2","TTGAACAATGCCGATC",9,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M E141V",2
"lib1","SARS-CoV-2","TTGAACACACAATAGG",10,277.21,9.59,-1.17,0.07,2.8,1.04,0,">1 nonsynonymous","L60P Q163E",2
"lib1","SARS-CoV-2","TTGAACACTAAGGGAT",5,146.35,8.7,-2.06,0.09,2.52,1.1,0,">1 nonsynonymous","T55L G117L S164L",3
"lib1","SARS-CoV-2","TTGAACACTACCAGTG",5,32.64,6.62,-4.15,0.56,1.5,1.2,0.04,">1 nonsynonymous","F8L V65G D90G V103R F156E S184F",6
"lib1","SARS-CoV-2","TTGAACACTGTTAAAA",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M N40D P161Y",3
"lib1","SARS-CoV-2","TTGAACACTTTAAATT",5,33.29,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","Y21T D97F N118C G152D V180L",5
"lib1","SARS-CoV-2","TTGAACAGATGAACCT",3,98.69,6,-4.76,0.7,1.5,1.14,0.01,">1 nonsynonymous","S45V A145T Y159S Q168I",4
"lib1","SARS-CoV-2","TTGAACAGCCTGACAC",4,1.19,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib1","SARS-CoV-2","TTGAACATCAGTAGCA",4,41.06,6,-4.76,2,1.5,1.36,0.03,">1 nonsynonymous","P7E P133W P161L T201V",4
"lib1","SARS-CoV-2","TTGAACATCATCCATA",3,60.05,8.75,-2.01,0.1,2.41,1.13,0,">1 nonsynonymous","P7D K87S Q176R",3
"lib1","SARS-CoV-2","TTGAACATGACACTGC",1,73.42,10.37,-0.39,0.07,2.9,1.04,0,">1 nonsynonymous","E10R G116P",2
"lib1","SARS-CoV-2","TTGAACATTACTACTT",2,39.95,10.39,-0.37,0.06,2.94,1,0,">1 nonsynonymous","I28M S41G A81S Q163L",4
"lib1","SARS-CoV-2","TTGAACCACTCCAAAC",6,117.29,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","A81I F156C Y175G",3
"lib1","SARS-CoV-2","TTGAACCAGTAAACAA",1,27.25,6.86,-3.9,0.26,1.51,1.04,0.02,">1 nonsynonymous","Y119E S139C Y143P",3
"lib1","SARS-CoV-2","TTGAACCATTACTCTA",5,48.39,7.79,-2.98,0.41,1.5,1,0.06,">1 nonsynonymous","N30L S43V L60R E76S",4
"lib1","SARS-CoV-2","TTGAACCCCACTAAGC",9,0.48,NA,NA,NA,NA,NA,NA,"stop","V11I N58T S69W P82F T100* N171I",6
"lib1","SARS-CoV-2","TTGAACCGCGGTAGTC",5,0.27,NA,NA,NA,NA,NA,NA,"stop","D97C S113P N120R L125V T148D F160*",6
"lib1","SARS-CoV-2","TTGAACCTATTACCAC",6,101.38,10.76,-0.01,0.06,2.91,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGAACGAAACAAACA",6,65.74,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","P7Y R73H L95I C195L",4
"lib1","SARS-CoV-2","TTGAACGAATACGTAC",1,5.92,10.88,0.11,0.36,2.98,1,0,">1 nonsynonymous","C6W S164T T201I",3
"lib1","SARS-CoV-2","TTGAACGACGCCCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* N107E D112T R127H",4
"lib1","SARS-CoV-2","TTGAACGATGAGATAC",4,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A V37M C61Q A105R P169M H189A",6
"lib1","SARS-CoV-2","TTGAACGCAAAAAGAA",2,26.95,8.44,-2.33,0.41,1.5,1,0.07,">1 nonsynonymous","R124Q V181L",2
"lib1","SARS-CoV-2","TTGAACGTAGTTAGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W G51Y F99L I104D L122V P133L",6
"lib1","SARS-CoV-2","TTGAACGTGACAGGAA",1,14.06,10.86,0.09,0.13,2.82,1.02,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","TTGAACGTGATGTCCT",2,55.26,10.27,-0.5,0.05,2.91,1.03,0,">1 nonsynonymous","Y39F T55M L122H I142V G174L",5
"lib1","SARS-CoV-2","TTGAACTAATTAGAAT",6,137.76,8.04,-2.72,0.12,2.15,1.11,0,">1 nonsynonymous","N1L A33Y C158S",3
"lib1","SARS-CoV-2","TTGAACTACATAATGG",7,76.73,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","E10H D112K Y123I",3
"lib1","SARS-CoV-2","TTGAACTCAGTATTTA",5,8.44,6.26,-4.5,0.55,1.72,1.09,0.02,">1 nonsynonymous","N1P V52I C61L L95H",4
"lib1","SARS-CoV-2","TTGAACTGCAGGGCTT",1,60.42,8.66,-2.11,0.08,2.31,1.11,0,">1 nonsynonymous","G74A D90L",2
"lib1","SARS-CoV-2","TTGAACTTGATAAAAG",4,119.73,8.69,-2.07,0.11,2.15,1.12,0,">1 nonsynonymous","N118S V180L",2
"lib1","SARS-CoV-2","TTGAACTTGTCACACT",1,22.01,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A42C R127V N157S",3
"lib1","SARS-CoV-2","TTGAACTTTCCAAAGG",1,28.54,10.53,-0.24,0.08,2.87,1.07,0,"1 nonsynonymous","S45H",1
"lib1","SARS-CoV-2","TTGAACTTTTGGTCTC",7,57.93,9.96,-0.8,0.05,2.85,1.05,0,">1 nonsynonymous","S41V G174F",2
"lib1","SARS-CoV-2","TTGAAGAAAGCTTTGG",1,11.78,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","I2S G117I T148D F167L G174L",5
"lib1","SARS-CoV-2","TTGAAGAACAGAAAAG",1,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42W",1
"lib1","SARS-CoV-2","TTGAAGAACATAAACA",1,4.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144R",1
"lib1","SARS-CoV-2","TTGAAGAAGATAGGGA",3,36.53,10.33,-0.43,0.06,2.78,1.07,0,">1 nonsynonymous","A33S L60G",2
"lib1","SARS-CoV-2","TTGAAGAATGACAAAT",5,97.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55D G83V N120S Y165W",4
"lib1","SARS-CoV-2","TTGAAGAGGCACGTTT",1,20.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49T F62V N120S R136L",4
"lib1","SARS-CoV-2","TTGAAGAGGTCACAAA",5,25.85,8.69,-2.07,0.1,2.85,1.06,0,"1 nonsynonymous","S113Q",1
"lib1","SARS-CoV-2","TTGAAGATAAAATCAT",5,37.86,10.56,-0.2,0.05,2.92,1,0,">1 nonsynonymous","N120K Q144P",2
"lib1","SARS-CoV-2","TTGAAGATGTTTGAAC",8,90.33,9.14,-1.63,0.07,2.75,1.16,0,">1 nonsynonymous","R27L V37N G146N E154A",4
"lib1","SARS-CoV-2","TTGAAGCAACAAAGCA",1,22.24,10.9,0.13,0.05,2.95,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAAGCAATACCTCG",1,14.84,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N64I L125P D137F",3
"lib1","SARS-CoV-2","TTGAAGCAATAGTGAA",1,66.13,10.69,-0.07,0.05,2.91,1.03,0,">1 nonsynonymous","H189C T201N",2
"lib1","SARS-CoV-2","TTGAAGCAATTACTAG",4,0.11,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib1","SARS-CoV-2","TTGAAGCACTCTAAAA",5,3.11,NA,NA,NA,NA,NA,NA,"stop","D90* D97M T201Q",3
"lib1","SARS-CoV-2","TTGAAGCAGATCCTGG",3,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Q D98S",2
"lib1","SARS-CoV-2","TTGAAGCAGCGCGTAC",3,61.49,10.73,-0.03,0.06,2.94,1.03,0,"1 nonsynonymous","Y66N",1
"lib1","SARS-CoV-2","TTGAAGCATTAAGAGC",11,24.92,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L60A L183R",2
"lib1","SARS-CoV-2","TTGAAGCCATTGTGAC",1,44.41,10.69,-0.08,0.07,2.95,1.03,0,">1 nonsynonymous","A42M Q84A K198Q",3
"lib1","SARS-CoV-2","TTGAAGCCCCGAGTAA",14,208.31,10.71,-0.05,0.04,2.88,1.03,0,">1 nonsynonymous","Y35F S41T P149Y",3
"lib1","SARS-CoV-2","TTGAAGCCCGCCTCTG",3,194.44,10.43,-0.34,0.03,2.93,1.03,0,">1 nonsynonymous","Q84K G174D",2
"lib1","SARS-CoV-2","TTGAAGCCTGCGGATT",5,0.08,NA,NA,NA,NA,NA,NA,"stop","L5Q N13V N118* I142Q G155V",5
"lib1","SARS-CoV-2","TTGAAGCCTTAACGAA",8,23.41,9.11,-1.65,0.33,1.5,1,0.06,">1 nonsynonymous","T15L Q79H E135R Q144F F167K G174V",6
"lib1","SARS-CoV-2","TTGAAGCTATCTGAAA",15,132.67,10.08,-0.69,0.11,2.48,1.02,0,">1 nonsynonymous","I2L R27L N64D Y123V",4
"lib1","SARS-CoV-2","TTGAAGCTCTATAAAA",3,0.73,NA,NA,NA,NA,NA,NA,"stop","L57Y G83* V103M V115H Y165V",5
"lib1","SARS-CoV-2","TTGAAGGAACGTTCCA",2,15.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P Y50L P96W V103N",4
"lib1","SARS-CoV-2","TTGAAGGAGGAATTAC",7,97.28,9.72,-1.05,0.12,2.36,1.07,0.01,">1 nonsynonymous","C6L E10K",2
"lib1","SARS-CoV-2","TTGAAGGATATCCTAA",1,32.54,10.63,-0.13,0.05,2.82,1.15,0,"1 nonsynonymous","G83F",1
"lib1","SARS-CoV-2","TTGAAGGTTCATCACG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46D K56H D90L I104T",4
"lib1","SARS-CoV-2","TTGAAGTAAACACGAC",2,20.87,10.66,-0.11,0.09,2.77,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAAGTACACCTATA",4,47.52,10.26,-0.51,0.12,2.41,1.06,0.01,"1 nonsynonymous","E135W",1
"lib1","SARS-CoV-2","TTGAAGTAGCCCCAAA",3,29.6,9.18,-1.58,0.35,1.5,1,0.06,">1 nonsynonymous","N40S Y50L",2
"lib1","SARS-CoV-2","TTGAAGTATTCGTTAG",3,27.59,6.99,-3.78,0.21,1.51,1.19,0.01,">1 nonsynonymous","D34V P133L",2
"lib1","SARS-CoV-2","TTGAAGTCAAGCAAAG",5,40.3,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","C6G D90T G117I",3
"lib1","SARS-CoV-2","TTGAAGTCGCTAATTG",2,14.54,9.73,-1.03,0.13,2.42,1.06,0.01,">1 nonsynonymous","G9Y L38C",2
"lib1","SARS-CoV-2","TTGAAGTGGCGCGGAA",2,21.36,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","G51S V180F T201A",3
"lib1","SARS-CoV-2","TTGAAGTTAGTAACCA",3,26.18,10.13,-0.64,0.09,2.73,1,0,">1 nonsynonymous","N107R T201L",2
"lib1","SARS-CoV-2","TTGAATAAAATGATCT",3,93.87,10.02,-0.75,0.15,2.2,1.07,0.01,"1 nonsynonymous","V77A",1
"lib1","SARS-CoV-2","TTGAATAACTGCCGGC",2,10.14,6,-4.76,2,2.39,1.12,0.03,">1 nonsynonymous","D98H V181P",2
"lib1","SARS-CoV-2","TTGAATAACTTACAAG",6,79.14,10.82,0.05,0.07,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAATAAGTACCTCA",5,136.33,6,-4.76,1.88,1.5,1.22,0.02,">1 nonsynonymous","Y119V T140N Y159G",3
"lib1","SARS-CoV-2","TTGAATACAGTAAACC",2,10.58,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","C6L L95K",2
"lib1","SARS-CoV-2","TTGAATACATTTTTGT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","S36P F134S K198*",3
"lib1","SARS-CoV-2","TTGAATACTCAAAATT",2,11.97,9.56,-1.2,0.07,2.89,1.04,0,">1 nonsynonymous","G146R A192N",2
"lib1","SARS-CoV-2","TTGAATAGAGAGACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2D A81* I88W",3
"lib1","SARS-CoV-2","TTGAATAGAGATCACA",2,17.46,6.97,-3.79,0.65,1.5,1.04,0.07,">1 nonsynonymous","I2M V20L A89K K128E R136L",5
"lib1","SARS-CoV-2","TTGAATAGATGACAGC",1,32.87,9.3,-1.47,0.1,2.67,1.1,0,">1 nonsynonymous","A14S K114G K132Y",3
"lib1","SARS-CoV-2","TTGAATAGGATACTAA",3,13.13,9.73,-1.04,0.19,1.95,1,0.01,">1 nonsynonymous","F12Y N64S D97P",3
"lib1","SARS-CoV-2","TTGAATAGGGACAAAA",3,32.05,10.58,-0.18,0.08,2.94,1.03,0,">1 nonsynonymous","E141Q T148A",2
"lib1","SARS-CoV-2","TTGAATATAAGCAAAT",1,6.9,11.04,0.27,0.17,2.81,1,0.01,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","TTGAATATAGAATACT",4,99.76,10.75,-0.01,0.06,2.87,1.06,0,"1 nonsynonymous","I142L",1
"lib1","SARS-CoV-2","TTGAATATAGGCGCTC",1,44.91,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","A33R V37S S53K I80M G155K V173T",6
"lib1","SARS-CoV-2","TTGAATATGAACTTGG",1,19.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49K Q84L S129K R136L T201Q",5
"lib1","SARS-CoV-2","TTGAATATGAGGCATA",3,69.04,8.53,-2.23,0.11,2.86,1.09,0,">1 nonsynonymous","C6T F156E",2
"lib1","SARS-CoV-2","TTGAATATGTATATAG",2,58.88,7.92,-2.84,0.16,1.78,1.1,0.01,">1 nonsynonymous","V11L V37T I72T Y119T",4
"lib1","SARS-CoV-2","TTGAATATTAGTCACT",1,4.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTGAATCAACACCTGG",2,14.68,6,-4.76,1.93,1.5,1.2,0.03,">1 nonsynonymous","D90Y R127M G166C",3
"lib1","SARS-CoV-2","TTGAATCACCCAATTG",1,16.78,9.65,-1.12,0.15,2.34,1.05,0.01,">1 nonsynonymous","T63K C102M K198T",3
"lib1","SARS-CoV-2","TTGAATCCACAAGATC",1,37.04,10.81,0.05,0.18,2.64,1.05,0.01,"1 nonsynonymous","N151C",1
"lib1","SARS-CoV-2","TTGAATCCAGACAAAT",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106G R124A T201G",3
"lib1","SARS-CoV-2","TTGAATCCGACGTAAT",1,55.59,10.81,0.05,0.09,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAATCGGCATGGAA",1,18.37,10.7,-0.07,0.12,2.79,1,0,">1 nonsynonymous","N1K S41F P149H L183S",4
"lib1","SARS-CoV-2","TTGAATCTCACACTCA",7,116.3,10.8,0.04,0.06,2.96,1.02,0,">1 nonsynonymous","Y35L V65F",2
"lib1","SARS-CoV-2","TTGAATCTCATAAGTT",6,37.54,10.57,-0.19,0.05,2.86,1.1,0,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","TTGAATCTCTTGAATG",2,22.76,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I88S L95W",2
"lib1","SARS-CoV-2","TTGAATCTTAAACATT",12,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V K48S",2
"lib1","SARS-CoV-2","TTGAATCTTGTCAGAG",5,22.94,10.14,-0.62,0.11,2.68,1.04,0.01,">1 nonsynonymous","L5P V115S K128W G152H",4
"lib1","SARS-CoV-2","TTGAATGACCTGTACC",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K Y39E N58D F167V",4
"lib1","SARS-CoV-2","TTGAATGACGCACTCA",2,42.9,10.41,-0.35,0.07,2.94,1,0,">1 nonsynonymous","C61K F156A",2
"lib1","SARS-CoV-2","TTGAATGAGTTGAAAC",5,105.76,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","F8S Y39T S113Y P149L",4
"lib1","SARS-CoV-2","TTGAATGCACCAGCGC",5,3938.66,10.59,-0.18,0.03,2.94,1.01,0,">1 nonsynonymous","I2K A14N",2
"lib1","SARS-CoV-2","TTGAATGCATGAATCC",3,21.74,10.61,-0.15,0.08,2.89,1.08,0,"1 nonsynonymous","N4C",1
"lib1","SARS-CoV-2","TTGAATGGCTTGGCAG",3,7.17,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N1S N40K S41M A105L P169I",5
"lib1","SARS-CoV-2","TTGAATGGTTTTAAAC",4,24.61,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","G9K D98L R127Q P133N",4
"lib1","SARS-CoV-2","TTGAATGTAATTTTCG",4,42.93,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","L57Y N64V F167H V173L L187N",5
"lib1","SARS-CoV-2","TTGAATGTACCGAAAA",2,60.36,6,-4.76,0.95,1.5,1.12,0,">1 nonsynonymous","S45Q C61K D68R D97C Y178V",5
"lib1","SARS-CoV-2","TTGAATGTACCGGAAT",3,162.38,7.91,-2.85,0.13,2.36,1.11,0.01,">1 nonsynonymous","S36D Y175D",2
"lib1","SARS-CoV-2","TTGAATGTGTAGCCGA",9,31.59,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16S K87E F99I P161R V180N",5
"lib1","SARS-CoV-2","TTGAATTAAGCACAAA",6,75.48,10.18,-0.59,0.06,2.64,1.01,0,"1 nonsynonymous","V77R",1
"lib1","SARS-CoV-2","TTGAATTACCGTCAAT",2,19.55,6.39,-4.38,1.84,1.5,1.19,0.02,"1 nonsynonymous","R124N",1
"lib1","SARS-CoV-2","TTGAATTCATTTGCAA",4,10.3,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","C49G A81P",2
"lib1","SARS-CoV-2","TTGAATTCTTTGCGCC",5,124.26,10.67,-0.09,0.05,2.85,1.09,0,">1 nonsynonymous","I2S N64L",2
"lib1","SARS-CoV-2","TTGAATTGGGGTGTAC",3,20.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F17I F44M P96I G146P",4
"lib1","SARS-CoV-2","TTGAATTTTAAATGAA",7,139.25,10.4,-0.37,0.04,2.88,1.02,0,">1 nonsynonymous","V32I S45P V173D",3
"lib1","SARS-CoV-2","TTGACAAAGTGCGCGA",3,15.61,7.64,-3.12,0.43,1.5,1.03,0.08,">1 nonsynonymous","V77E A89S P149L T201K",4
"lib1","SARS-CoV-2","TTGACAAATAGCTCCA",2,25.8,6,-4.76,2,1.5,1.05,0,">1 nonsynonymous","G86I N120P",2
"lib1","SARS-CoV-2","TTGACAACCACACCAA",2,43.64,10.95,0.19,0.13,2.84,1.02,0.01,"1 nonsynonymous","K199S",1
"lib1","SARS-CoV-2","TTGACAACCACACCCG",3,1.02,NA,NA,NA,NA,NA,NA,"stop","V37Q V181*",2
"lib1","SARS-CoV-2","TTGACAACGTTACGCA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","S36G G101Y S113F Y121* Q176R",5
"lib1","SARS-CoV-2","TTGACAACGTTATAAG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","L122E I138W V173I T201*",4
"lib1","SARS-CoV-2","TTGACAAGAACTTTGT",3,30.93,10.25,-0.51,0.11,2.9,1,0,">1 nonsynonymous","K56M A145S F156L",3
"lib1","SARS-CoV-2","TTGACAAGACAATGCG",4,133.05,10.63,-0.14,0.05,2.87,1.06,0,"1 nonsynonymous","N1C",1
"lib1","SARS-CoV-2","TTGACAAGATTATTCA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Y C61T A190Y",3
"lib1","SARS-CoV-2","TTGACAAGTAACCTTA",1,26.83,10.94,0.17,0.12,2.61,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGACAAGTAACTAAA",1,26.37,10.14,-0.63,0.1,2.81,1.18,0,"1 nonsynonymous","A33N",1
"lib1","SARS-CoV-2","TTGACAAGTGTATCTA",6,107.81,10.37,-0.4,0.04,2.96,1,0,">1 nonsynonymous","K56R K87N",2
"lib1","SARS-CoV-2","TTGACAATAAAATCAT",2,6.91,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","N40T Y50S T100D E141Q C158N",5
"lib1","SARS-CoV-2","TTGACAATCCCATAAA",1,37.51,6,-4.76,2,1.5,1.26,0.02,">1 nonsynonymous","K48L N64T A105K T148I L162S",5
"lib1","SARS-CoV-2","TTGACAATTCACCACC",4,99.11,10.65,-0.12,0.05,2.93,1.02,0,">1 nonsynonymous","N120V F160A S200W",3
"lib1","SARS-CoV-2","TTGACAATTGTATCAA",6,31.79,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2S Y91T A105S N118L V180G E186H",6
"lib1","SARS-CoV-2","TTGACACAAGAACATT",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77Q L162K",2
"lib1","SARS-CoV-2","TTGACACATAAGAATC",3,65.83,8.28,-2.48,0.14,2.41,1.15,0.01,">1 nonsynonymous","S41F G83Y S113C F156S",4
"lib1","SARS-CoV-2","TTGACACCCGATAGGA",3,36.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E135C T170V G174S",3
"lib1","SARS-CoV-2","TTGACACGAATACATT",2,16.39,6,-4.76,2,1.5,1.09,0.03,">1 nonsynonymous","S108F P149S",2
"lib1","SARS-CoV-2","TTGACACGATTTGGTA",2,23.78,7.56,-3.2,0.24,1.5,1.02,0.02,">1 nonsynonymous","F8T A14G K56S T148P",4
"lib1","SARS-CoV-2","TTGACACGGGAACATT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","G9V D34L E76*",3
"lib1","SARS-CoV-2","TTGACACGTCAACAAT",1,13.35,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F17L N40I Y175N",3
"lib1","SARS-CoV-2","TTGACAGAACAAGTCT",3,13.5,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y93D N107H P133C P149I",4
"lib1","SARS-CoV-2","TTGACAGAGAACACTT",7,5.45,NA,NA,NA,NA,NA,NA,"stop","L60* D90I",2
"lib1","SARS-CoV-2","TTGACAGAGATTTAGA",14,172.57,6.99,-3.78,0.2,1.5,1.12,0.01,">1 nonsynonymous","Y39K R73F",2
"lib1","SARS-CoV-2","TTGACAGCCGGCCTTT",5,0,NA,NA,NA,NA,NA,NA,"stop","N92* T201*",2
"lib1","SARS-CoV-2","TTGACAGCGTAGATCT",6,51.93,10.67,-0.1,0.09,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGACAGCTCAAAAGC",2,299.92,10.79,0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGACATAAAATGCTT",8,275.93,10.69,-0.08,0.03,2.94,1.02,0,"1 nonsynonymous","D59F",1
"lib1","SARS-CoV-2","TTGACATAGCCCGCTG",3,28.64,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","D90N N110V L125F E135P T140S",5
"lib1","SARS-CoV-2","TTGACATATAACTTGA",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y V103T D112S",3
"lib1","SARS-CoV-2","TTGACATCTGACGTTC",6,1.55,NA,NA,NA,NA,NA,NA,"stop","Y50G G83L N107S K132D P149N N171*",6
"lib1","SARS-CoV-2","TTGACATTTTAGGATG",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T G83P K94S",3
"lib1","SARS-CoV-2","TTGACCAAAAACAATA",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L I142V",2
"lib1","SARS-CoV-2","TTGACCAAAAATAATG",4,6.73,6,-4.76,2,2.96,1.06,0.02,">1 nonsynonymous","N13L T85K P96K R136F G152Y",5
"lib1","SARS-CoV-2","TTGACCAAAATCACCT",4,129.98,10.71,-0.06,0.04,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGACCACTGATAAAT",1,8.83,10.22,-0.55,0.19,2.79,1.02,0.01,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","TTGACCAGCCACCAAG",2,12.49,9.71,-1.05,0.32,1.87,1.16,0.03,">1 nonsynonymous","T3A S45V T55R T140N",4
"lib1","SARS-CoV-2","TTGACCAGTCGCCTTT",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P S41Y P54A D112F L162E K199T",6
"lib1","SARS-CoV-2","TTGACCATACCAATTA",10,129.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","R25Q G86F Y119R Y165L",4
"lib1","SARS-CoV-2","TTGACCATATTGATAT",1,18.92,10.86,0.09,0.09,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGACCCAGATAACGA",2,25.13,10.22,-0.55,0.09,2.91,1.07,0,"1 nonsynonymous","F156K",1
"lib1","SARS-CoV-2","TTGACCCAGCGGTAGG",3,33.8,10.75,-0.02,0.07,2.94,1.03,0,">1 nonsynonymous","N109Q Y123F",2
"lib1","SARS-CoV-2","TTGACCCATTAATGGG",3,49.73,8.19,-2.57,0.19,1.7,1.14,0.01,">1 nonsynonymous","S43G G146L",2
"lib1","SARS-CoV-2","TTGACCCGCTAATAGA",12,4.3,NA,NA,NA,NA,NA,NA,"stop","N24*",1
"lib1","SARS-CoV-2","TTGACCGACTTCTTAA",1,2.13,NA,NA,NA,NA,NA,NA,"stop","V37A F99* D112H Y119V R127T F167H L187I",7
"lib1","SARS-CoV-2","TTGACCGATACCAGGA",9,37.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G86S D97F Y143L",3
"lib1","SARS-CoV-2","TTGACCGCGATGCTTA",9,102.06,10.47,-0.3,0.04,2.93,1.01,0,">1 nonsynonymous","V32D A190F",2
"lib1","SARS-CoV-2","TTGACCGCGTACAAAA",1,6.63,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V103R L162S",2
"lib1","SARS-CoV-2","TTGACCGGGCTACTTG",4,17.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124Y",1
"lib1","SARS-CoV-2","TTGACCGGTGATTAAA",5,35.6,10.15,-0.61,0.08,2.77,1.08,0,">1 nonsynonymous","V153Y P169Y",2
"lib1","SARS-CoV-2","TTGACCTAAACAAACT",6,35.31,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V11A F99P Q168G",3
"lib1","SARS-CoV-2","TTGACCTAAAGTGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28T S43Y Y50* C61D V77L S113E Y121I R127K C158*",9
"lib1","SARS-CoV-2","TTGACCTATTACCTTG",1,11.52,10.86,0.1,0.13,2.83,1.08,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGACCTCGCACTTGA",4,77.5,9.27,-1.5,0.19,1.67,1.17,0.02,">1 nonsynonymous","V11M V52S",2
"lib1","SARS-CoV-2","TTGACCTCTGTGTGCA",3,4.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y159S",1
"lib1","SARS-CoV-2","TTGACCTGAGTAAACA",2,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y F47E D90L P96M V103H K198T",6
"lib1","SARS-CoV-2","TTGACGAAAAGACATT",2,17.68,6,-4.76,2,1.5,1.23,0.04,">1 nonsynonymous","A105L N120V",2
"lib1","SARS-CoV-2","TTGACGAACTGAGTCA",8,168.21,9.34,-1.43,0.05,2.85,1.11,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TTGACGAATAAAAACC",3,111.34,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","I2C F8N K48L P82N G101A Q176K",6
"lib1","SARS-CoV-2","TTGACGAGGACGATCA",3,0.97,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib1","SARS-CoV-2","TTGACGATTTACTAAA",3,63.98,6.62,-4.15,0.3,1.5,1.1,0.01,">1 nonsynonymous","S53Q G83N D112Y K128I",4
"lib1","SARS-CoV-2","TTGACGCAGAACCCAT",5,45.62,8.09,-2.68,0.18,1.5,1.13,0.01,">1 nonsynonymous","Y91T G174Y",2
"lib1","SARS-CoV-2","TTGACGCGTGCTATGT",4,29.3,9.68,-1.09,0.11,1.9,1.06,0.01,">1 nonsynonymous","C6N G83Y D98H N110M",4
"lib1","SARS-CoV-2","TTGACGTAACTTGTGG",5,15.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13Y A105E G146W",3
"lib1","SARS-CoV-2","TTGACGTAAGCAGTAG",2,33.02,10.77,0,0.03,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGACGTATGAGATAA",12,78.62,9.35,-1.42,0.08,2.55,1.09,0,"1 nonsynonymous","P161T",1
"lib1","SARS-CoV-2","TTGACGTGACGAATAG",2,22.78,9.26,-1.5,0.21,2.24,1.13,0.01,"1 nonsynonymous","F8D",1
"lib1","SARS-CoV-2","TTGACGTTTCTTTGAT",5,15.21,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F17K L95S K198Q",3
"lib1","SARS-CoV-2","TTGACTAAAGTTAAAT",7,192.73,10.04,-0.72,0.09,2.45,1.02,0,">1 nonsynonymous","S29L K48I",2
"lib1","SARS-CoV-2","TTGACTAATAAAGAAA",7,85.97,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V52N A81P F156I",3
"lib1","SARS-CoV-2","TTGACTAATACTTAAT",3,14.53,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","N1W A42T S53L I72S K132G Y143E",6
"lib1","SARS-CoV-2","TTGACTACAAATAATT",2,25.44,10.94,0.17,0.1,2.9,1.03,0,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","TTGACTACATTAATGA",4,115.55,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C31V S43Q V52L Y159S",4
"lib1","SARS-CoV-2","TTGACTAGGAAGACAT",7,30.2,6.98,-3.79,0.5,1.5,1.13,0.06,">1 nonsynonymous","E76I K132R V153H S200F",4
"lib1","SARS-CoV-2","TTGACTAGTCACCCTT",4,13.61,10.16,-0.61,0.08,2.66,1.17,0,"1 nonsynonymous","Y91K",1
"lib1","SARS-CoV-2","TTGACTATCAAAAATA",7,86.21,10.63,-0.14,0.04,2.95,1.02,0,">1 nonsynonymous","T63H E135Q",2
"lib1","SARS-CoV-2","TTGACTATTTATTCTT",4,37.07,9.4,-1.37,0.24,1.56,1.18,0.03,">1 nonsynonymous","F99I E141R",2
"lib1","SARS-CoV-2","TTGACTCACGCTGGCA",2,6.93,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","F47I G51I D98E G166K",4
"lib1","SARS-CoV-2","TTGACTCAGTACCGAT",2,0.83,NA,NA,NA,NA,NA,NA,"stop","A22* T46L D90L I104T D112* L122K C150L",7
"lib1","SARS-CoV-2","TTGACTCCCAACCTTG",6,14.08,NA,NA,NA,NA,NA,NA,"stop","N40V C61P P82T E141I N157* Q176R",6
"lib1","SARS-CoV-2","TTGACTCCCTATTCAA",3,154.12,10.58,-0.18,0.04,2.88,1.04,0,">1 nonsynonymous","A42T S45D",2
"lib1","SARS-CoV-2","TTGACTCGAATGTAAA",4,28.7,6.64,-4.12,0.35,1.5,1.17,0.02,">1 nonsynonymous","S41K S45L P82Q",3
"lib1","SARS-CoV-2","TTGACTCTCAATGTAC",2,14.6,10.68,-0.08,0.17,2.87,1.08,0.03,"wildtype","",0
"lib1","SARS-CoV-2","TTGACTGTTTGTAGCT",3,67.31,10.69,-0.07,0.08,2.87,1.06,0,">1 nonsynonymous","N13H L122S",2
"lib1","SARS-CoV-2","TTGACTTATGGGATTT",5,1.21,NA,NA,NA,NA,NA,NA,"stop","L60N D97F C158*",3
"lib1","SARS-CoV-2","TTGACTTATTTAGTTC",2,6.32,6,-4.76,2,1.5,1.38,0.04,">1 nonsynonymous","A14R K94P W106R K114W T201R",5
"lib1","SARS-CoV-2","TTGACTTCAAGACGCC",2,29.36,8.69,-2.07,0.35,1.5,1,0.06,">1 nonsynonymous","R27Y P96I G155M L162S V173M",5
"lib1","SARS-CoV-2","TTGACTTTACTCAATG",2,17.84,9.08,-1.69,0.11,2.66,1.21,0.01,">1 nonsynonymous","R16S G117F",2
"lib1","SARS-CoV-2","TTGACTTTAGCATATA",5,85.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","A89K R127T Y143R",3
"lib1","SARS-CoV-2","TTGACTTTATTCAACT",4,59.88,9.58,-1.18,0.36,1.5,1,0.07,">1 nonsynonymous","T63N I72S",2
"lib1","SARS-CoV-2","TTGAGAAACCACAGAC",2,44.46,7.66,-3.1,0.28,1.58,1.13,0.03,"1 nonsynonymous","Y175I",1
"lib1","SARS-CoV-2","TTGAGAAACGCATATT",4,50.96,8.07,-2.7,0.34,1.5,1.03,0.05,">1 nonsynonymous","I2Q T55G V77S Y119R",4
"lib1","SARS-CoV-2","TTGAGAACAAAACAGA",4,1.19,NA,NA,NA,NA,NA,NA,"stop","R27* K87A W106Q P161W T170N",5
"lib1","SARS-CoV-2","TTGAGAACATGACCTA",21,57.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42P R78V D97G G101M",4
"lib1","SARS-CoV-2","TTGAGAACATTGAGGG",3,5.47,NA,NA,NA,NA,NA,NA,"stop","A14C R73V Y93* T100Y I104F Y119L I142E",7
"lib1","SARS-CoV-2","TTGAGAACGGGCAGAC",2,37.56,8.99,-1.78,0.06,2.82,1.08,0,">1 nonsynonymous","I2E S41L L125Y C195T",4
"lib1","SARS-CoV-2","TTGAGAACTGTTAGGA",2,20.33,10.83,0.06,0.09,2.93,1.01,0.01,"1 nonsynonymous","S184V",1
"lib1","SARS-CoV-2","TTGAGAATATTTATCT",5,1.91,NA,NA,NA,NA,NA,NA,"stop","G152* A192G",2
"lib1","SARS-CoV-2","TTGAGAATCTTGACCA",3,39.57,10.58,-0.19,0.05,2.92,1.01,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","TTGAGAATGAGGTTAG",9,89.13,10.8,0.04,0.06,2.94,1.02,0,"1 nonsynonymous","T63N",1
"lib1","SARS-CoV-2","TTGAGACAACATAATA",2,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A S129D D137V I142T",4
"lib1","SARS-CoV-2","TTGAGACAAGTGGCAT",3,55.85,10.11,-0.66,0.06,2.24,1.04,0,">1 nonsynonymous","P149Y V173S",2
"lib1","SARS-CoV-2","TTGAGACAATATAAAC",1,26.56,9.69,-1.07,0.16,2.54,1.04,0.01,"1 nonsynonymous","R179K",1
"lib1","SARS-CoV-2","TTGAGACATATCGAAT",1,24.68,9.95,-0.81,0.13,2.48,1.01,0.01,">1 nonsynonymous","A67F D98A",2
"lib1","SARS-CoV-2","TTGAGACCACATCTTA",4,141.07,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y39T V71C W106S",3
"lib1","SARS-CoV-2","TTGAGACTACGAAATG",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D Y91K L122G",3
"lib1","SARS-CoV-2","TTGAGACTCGGCGCGG",1,38.53,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","R25P D98S E135V",3
"lib1","SARS-CoV-2","TTGAGAGCGAGTGAAT",2,15.88,6,-4.76,1.58,1.5,1.15,0.01,">1 nonsynonymous","S45T N92G G152S",3
"lib1","SARS-CoV-2","TTGAGAGGTTCTTCTG",7,0.17,NA,NA,NA,NA,NA,NA,"stop","A18E A67S G83A Q168*",4
"lib1","SARS-CoV-2","TTGAGAGTCACAGATA",4,11.32,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","TTGAGATACATACGTG",1,52.57,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","Q84G N107R P177K",3
"lib1","SARS-CoV-2","TTGAGATCCAATCGAT",7,39.24,6.36,-4.4,0.56,1.5,1.16,0.02,">1 nonsynonymous","F8R Y35R",2
"lib1","SARS-CoV-2","TTGAGATGCACCCCCC",13,105.2,10.12,-0.65,0.05,2.94,1,0,">1 nonsynonymous","L60A E154I",2
"lib1","SARS-CoV-2","TTGAGATGTGCAGAGG",3,28.46,9.4,-1.36,0.26,1.75,1.13,0.03,">1 nonsynonymous","L60C L122V T140I G152I",4
"lib1","SARS-CoV-2","TTGAGATTAAGAGCTA",3,31.59,6.68,-4.09,0.7,1.5,1.13,0.05,">1 nonsynonymous","F44I Y91S R127Q G146C",4
"lib1","SARS-CoV-2","TTGAGCAAAACGACAC",6,31.46,6,-4.76,2,1.5,1.25,0.02,">1 nonsynonymous","N4C P82G S147T",3
"lib1","SARS-CoV-2","TTGAGCAAAGATTATA",3,0.37,NA,NA,NA,NA,NA,NA,"stop","A18R K48E G101C L125T F156*",5
"lib1","SARS-CoV-2","TTGAGCAATAATCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10Q C31S N40E S147*",4
"lib1","SARS-CoV-2","TTGAGCACACGTAATT",6,159.2,6.03,-4.73,0.87,1.5,1.18,0.02,">1 nonsynonymous","F44N D59I Y119P S129V",4
"lib1","SARS-CoV-2","TTGAGCACGGTGATAC",6,48.79,8.84,-1.93,0.12,2.24,1.17,0.01,">1 nonsynonymous","T55H W106R Y119S Q168A",4
"lib1","SARS-CoV-2","TTGAGCCCACCTTCCA",1,11.61,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F70G D90F",2
"lib1","SARS-CoV-2","TTGAGCCCCCGAAAAA",4,90.21,10.71,-0.06,0.04,2.89,1.03,0,">1 nonsynonymous","Y35I T100S T148R",3
"lib1","SARS-CoV-2","TTGAGCCGCAATCTAC",1,51.11,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A18Q K87N C150Y T193P",4
"lib1","SARS-CoV-2","TTGAGCGAGTTTGGAA",2,72.79,10.77,0,0.08,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAGCGCCGCAGTAA",1,17.63,10.76,0,0.04,2.96,1,0,"1 nonsynonymous","I2S",1
"lib1","SARS-CoV-2","TTGAGCGGGGGTCGTT",10,50.91,9.61,-1.16,0.13,1.84,1.1,0.01,"1 nonsynonymous","Y50R",1
"lib1","SARS-CoV-2","TTGAGCGGTAAAGCAG",7,37.74,8.97,-1.8,0.22,1.5,1.01,0.02,">1 nonsynonymous","F12R Q144T",2
"lib1","SARS-CoV-2","TTGAGCTAAATGAGAC",2,123.24,10.71,-0.05,0.04,2.94,1.02,0,"1 nonsynonymous","F62S",1
"lib1","SARS-CoV-2","TTGAGCTACGAAGATA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","T3M S69*",2
"lib1","SARS-CoV-2","TTGAGCTACGCCGCAT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G T140R",2
"lib1","SARS-CoV-2","TTGAGCTCCTCTCAAA",4,20.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40V Q176Y",2
"lib1","SARS-CoV-2","TTGAGCTCGAAATGGC",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M L183M",2
"lib1","SARS-CoV-2","TTGAGCTCTCGGGGGA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57A G86S V173P",3
"lib1","SARS-CoV-2","TTGAGGAATGCAAAAG",1,49.1,10.57,-0.19,0.04,2.93,1.04,0,">1 nonsynonymous","I2D V37L N151I",3
"lib1","SARS-CoV-2","TTGAGGACATAATCGA",2,61.79,9.48,-1.28,0.15,1.5,1.09,0.01,">1 nonsynonymous","V32L D98M N107G",3
"lib1","SARS-CoV-2","TTGAGGACATTATACC",1,36.46,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","V37T A67S R73L A81T S129R Y175S",6
"lib1","SARS-CoV-2","TTGAGGAGAAAAATAA",4,1.25,NA,NA,NA,NA,NA,NA,"stop","L5I R27W S45* W106S",4
"lib1","SARS-CoV-2","TTGAGGCCCATCCGAG",1,16.44,6.28,-4.48,0.95,1.5,1.17,0.05,">1 nonsynonymous","F47G T55M D97R P177G A190M",5
"lib1","SARS-CoV-2","TTGAGGCTGCATTACG",16,82.36,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","T55F R73Q C102Y G174T",4
"lib1","SARS-CoV-2","TTGAGGCTTCAAATGT",3,23.98,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","D68A N120H",2
"lib1","SARS-CoV-2","TTGAGGGGACACGTTA",2,13.17,8.06,-2.7,0.46,1.5,1.14,0.04,">1 nonsynonymous","N1G G9I F99Y N110W",4
"lib1","SARS-CoV-2","TTGAGGGTAATGTAAT",1,0.3,NA,NA,NA,NA,NA,NA,"stop","C6T W23* C31F L95Y",4
"lib1","SARS-CoV-2","TTGAGGTCTCGTACTC",3,9.19,6,-4.76,2,1.5,1.13,0.07,">1 nonsynonymous","C102N E135D P169M",3
"lib1","SARS-CoV-2","TTGAGTAAAGTGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61R I72W G86R D90S W106* S113K Q176H",7
"lib1","SARS-CoV-2","TTGAGTAACGAGTAAG",2,58,10.64,-0.12,0.05,2.93,1.02,0,">1 nonsynonymous","A22K G51H",2
"lib1","SARS-CoV-2","TTGAGTAACTACAGAT",7,65.15,9.64,-1.13,0.16,1.94,1.05,0.01,">1 nonsynonymous","S41R E135T P149W",3
"lib1","SARS-CoV-2","TTGAGTAATGAAATGA",3,12.11,6,-4.76,2,1.5,1.34,0.05,">1 nonsynonymous","F8G P54S F134M K199L",4
"lib1","SARS-CoV-2","TTGAGTACCCTCCCTA",5,20.86,6.14,-4.62,0.99,1.5,1.2,0.05,">1 nonsynonymous","C49M R78L K87I C150W T201V",5
"lib1","SARS-CoV-2","TTGAGTACGCCAAAAA",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67D I72T D90Y L183S",4
"lib1","SARS-CoV-2","TTGAGTAGAATTCCGA",3,30.46,9.94,-0.83,0.1,2.19,1.01,0.01,">1 nonsynonymous","F12W G152K",2
"lib1","SARS-CoV-2","TTGAGTAGGTAACTAA",6,82.12,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y93T A105F G116S C150T",4
"lib1","SARS-CoV-2","TTGAGTATCCCACAGG",2,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S69G",1
"lib1","SARS-CoV-2","TTGAGTCAACGCCATA",2,35.93,9.94,-0.83,0.16,2.47,1.04,0.01,">1 nonsynonymous","S36W A81C",2
"lib1","SARS-CoV-2","TTGAGTCCCTCAACTG",3,57.49,9.69,-1.07,0.1,2.08,1.09,0,">1 nonsynonymous","G9S N107G N120C",3
"lib1","SARS-CoV-2","TTGAGTGAACACAAAG",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24K G116H L122C Q176L",4
"lib1","SARS-CoV-2","TTGAGTGACAATCATA",11,119.16,6,-4.76,2,1.5,1.24,0.01,">1 nonsynonymous","V20H I28P K48M Q84T D90V D112P",6
"lib1","SARS-CoV-2","TTGAGTGACTTTAACA",11,1.7,NA,NA,NA,NA,NA,NA,"stop","K56M T201*",2
"lib1","SARS-CoV-2","TTGAGTGCACAAATGC",3,0.95,NA,NA,NA,NA,NA,NA,"stop","P7I V77* K128M Y159F",4
"lib1","SARS-CoV-2","TTGAGTGGTATATATA",3,34.16,10.81,0.05,0.08,2.93,1.02,0,"1 nonsynonymous","T100I",1
"lib1","SARS-CoV-2","TTGAGTGTCACGTATC",2,12.6,7.47,-3.29,0.15,2.68,1.05,0.01,">1 nonsynonymous","I28E T55C L125S",3
"lib1","SARS-CoV-2","TTGAGTTAGACTAAGA",5,17.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13F D34G S129I N130D",4
"lib1","SARS-CoV-2","TTGAGTTATCCTTGAC",2,17.28,8.39,-2.38,0.33,1.5,1.08,0.05,">1 nonsynonymous","W23T E141G",2
"lib1","SARS-CoV-2","TTGAGTTATTAAAACA",4,77.01,6,-4.76,0.85,1.5,1.15,0.01,">1 nonsynonymous","L57V L131K",2
"lib1","SARS-CoV-2","TTGAGTTCGATACAGC",1,34.57,10.84,0.08,0.08,2.9,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGAGTTGGCTTCACA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","D90V F99* Y121I G146C",4
"lib1","SARS-CoV-2","TTGAGTTTCGCTTCAA",4,40.31,10.74,-0.02,0.07,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATAAAAAAGGGTC",11,210.47,10.07,-0.7,0.04,2.81,1,0,">1 nonsynonymous","C6H F62L",2
"lib1","SARS-CoV-2","TTGATAAAACAATCGA",1,41.22,9.7,-1.06,0.07,2.77,1.05,0,">1 nonsynonymous","A81T G166S",2
"lib1","SARS-CoV-2","TTGATAAAACTAGCGG",1,30.44,10,-0.76,0.05,2.92,1.03,0,">1 nonsynonymous","C61P Q168M",2
"lib1","SARS-CoV-2","TTGATAAAAGAGACCC",5,47.9,10.79,0.03,0.07,2.96,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATAAACACTATAT",2,0.73,NA,NA,NA,NA,NA,NA,"stop","T3C R27* I88*",3
"lib1","SARS-CoV-2","TTGATAAACATATCAG",5,93.58,10.38,-0.38,0.07,2.85,1.04,0,">1 nonsynonymous","N64L T85I",2
"lib1","SARS-CoV-2","TTGATAAACCGTTATC",4,0.75,NA,NA,NA,NA,NA,NA,"stop","W23* V37K V103G P133F Y175H",5
"lib1","SARS-CoV-2","TTGATAAACTCCCCAT",3,107.28,9.81,-0.95,0.03,2.87,1.07,0,">1 nonsynonymous","G9S Y91F T170R",3
"lib1","SARS-CoV-2","TTGATAAAGGATTAAG",2,0.43,NA,NA,NA,NA,NA,NA,"stop","N40* L122Y S200R",3
"lib1","SARS-CoV-2","TTGATAACAACCTAAA",6,34.34,6,-4.76,2,1.5,1.35,0.04,">1 nonsynonymous","K94A S129L R136I G146P",4
"lib1","SARS-CoV-2","TTGATAACACTTCGGG",1,52.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V P82A G155T K198A",4
"lib1","SARS-CoV-2","TTGATAACATACTAGC",3,85.31,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","T100P R179H",2
"lib1","SARS-CoV-2","TTGATAACGTAACACT",3,48.66,10.59,-0.17,0.05,2.83,1.06,0,"1 nonsynonymous","D34N",1
"lib1","SARS-CoV-2","TTGATAACTAAAATCC",1,15.49,10.3,-0.46,0.11,2.86,1.12,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGATAACTTCGTCAC",4,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N T100I C102Y",3
"lib1","SARS-CoV-2","TTGATAAGGATTTATG",4,64.87,9.88,-0.88,0.08,2.52,1.09,0,">1 nonsynonymous","A18G L60P",2
"lib1","SARS-CoV-2","TTGATAAGGCAATGGT",6,173.54,10.59,-0.18,0.04,2.88,1.04,0,">1 nonsynonymous","N58Y F160R",2
"lib1","SARS-CoV-2","TTGATAAGGCGAGCCA",13,102.04,6,-4.76,0.78,1.5,1.13,0,">1 nonsynonymous","A18S I80A P96A W106L N151Y",5
"lib1","SARS-CoV-2","TTGATAAGTCGATTCC",1,42.82,7.85,-2.91,0.11,1.74,1.11,0.01,">1 nonsynonymous","K56V G86C",2
"lib1","SARS-CoV-2","TTGATAATAGTAAACT",6,92.36,10.6,-0.16,0.04,2.91,1.01,0,"1 nonsynonymous","D90Y",1
"lib1","SARS-CoV-2","TTGATAATATTCACGT",2,21.4,9.97,-0.79,0.07,2.93,1,0,"1 nonsynonymous","Y123N",1
"lib1","SARS-CoV-2","TTGATAATCCGTAGTA",9,88.23,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","E10W L57M S113C T170E",4
"lib1","SARS-CoV-2","TTGATAATGTACCTAG",3,48.36,9.88,-0.88,0.18,2.21,1.06,0.01,">1 nonsynonymous","D59L T85W",2
"lib1","SARS-CoV-2","TTGATAATTTGAAGAA",1,8.5,7.45,-3.31,0.44,1.5,1.08,0.04,">1 nonsynonymous","I28F V37N K48C D59K L131Q",5
"lib1","SARS-CoV-2","TTGATAATTTGCGTAA",2,150.52,10.36,-0.4,0.03,2.82,1.04,0,">1 nonsynonymous","T46D Q84R",2
"lib1","SARS-CoV-2","TTGATACAACTCTTAC",4,25.9,7.97,-2.8,0.4,1.5,1,0.05,">1 nonsynonymous","A14G S43F I88E Y121I K128L",5
"lib1","SARS-CoV-2","TTGATACAATGTAAAA",3,26.86,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","I2Y A89L N110L C158L",4
"lib1","SARS-CoV-2","TTGATACACAAATCTT",6,49.6,10.12,-0.64,0.12,2.15,1,0.01,">1 nonsynonymous","S69Q K114Y T148I",3
"lib1","SARS-CoV-2","TTGATACACCAACGTG",1,34.75,9.13,-1.63,0.1,2.74,1.12,0,">1 nonsynonymous","G166V E186P",2
"lib1","SARS-CoV-2","TTGATACAGTAATGCA",3,25.65,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","F8T G172K",2
"lib1","SARS-CoV-2","TTGATACATAGAGCGC",1,10.6,10.69,-0.07,0.14,2.84,1.1,0.01,">1 nonsynonymous","I2K E10D S184H",3
"lib1","SARS-CoV-2","TTGATACATATAACAG",4,19.07,7.43,-3.33,0.36,1.5,1.07,0.05,">1 nonsynonymous","C61T G83Q Y165H S184K",4
"lib1","SARS-CoV-2","TTGATACGATAGCATA",2,25.65,6.29,-4.48,0.46,1.5,1.09,0.01,">1 nonsynonymous","K132C Y159K",2
"lib1","SARS-CoV-2","TTGATACTAGCTCCCC",1,24.15,8.54,-2.23,0.21,1.59,1.11,0.02,"1 nonsynonymous","V71S",1
"lib1","SARS-CoV-2","TTGATACTGACTTATT",2,26.64,10.78,0.02,0.09,2.86,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATACTTAAAAAAA",1,10.96,9.16,-1.61,0.18,2.22,1.33,0.02,">1 nonsynonymous","F44N Y91N",2
"lib1","SARS-CoV-2","TTGATACTTATGGACT",1,9.65,6,-4.76,2,3,1.29,0.01,">1 nonsynonymous","G9L Y39S S45Y C61A K94V N107R P149V P161V",8
"lib1","SARS-CoV-2","TTGATACTTCCCAGCA",1,10.48,10.09,-0.68,0.08,2.45,1,0,">1 nonsynonymous","D59A G116E G152H H189F",4
"lib1","SARS-CoV-2","TTGATAGAAGGATAAT",4,40.52,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y50C R73S G86M E154S",4
"lib1","SARS-CoV-2","TTGATAGAATTCGTTC",8,59.15,10.47,-0.29,0.07,2.8,1.05,0,">1 nonsynonymous","S41A T140L N151T",3
"lib1","SARS-CoV-2","TTGATAGACAGAGTTC",3,53.09,9.06,-1.7,0.16,1.53,1.13,0.01,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","TTGATAGCGCATTGCA",5,16.8,9.53,-1.24,0.17,2.32,1.01,0.01,">1 nonsynonymous","F12W A22S",2
"lib1","SARS-CoV-2","TTGATAGGATACAGAG",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R R27L F44M D75A R124E",5
"lib1","SARS-CoV-2","TTGATAGGCCTACACG",3,144.8,10.56,-0.2,0.05,2.92,1.03,0,"1 nonsynonymous","A33S",1
"lib1","SARS-CoV-2","TTGATAGGGAGAGCTA",8,73.93,6.06,-4.7,1.46,1.5,1.14,0.05,">1 nonsynonymous","K94E L95P D112M N120V",4
"lib1","SARS-CoV-2","TTGATAGGTCTAGACT",2,39.77,10.81,0.05,0.07,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATAGTCATCAAGT",1,12.7,10.04,-0.73,0.11,2.96,1,0,"1 nonsynonymous","N171C",1
"lib1","SARS-CoV-2","TTGATAGTTACAAAAG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib1","SARS-CoV-2","TTGATAGTTTTGAGGT",7,23.84,6.29,-4.47,0.39,1.5,1.09,0.02,">1 nonsynonymous","T100N S113V R124S K132F Y178L",5
"lib1","SARS-CoV-2","TTGATATAAAAAAGAA",4,22.27,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V11L D68K R136S Y178A",4
"lib1","SARS-CoV-2","TTGATATAAAATTTGT",6,96.67,9.65,-1.12,0.11,1.94,1.12,0,"1 nonsynonymous","I28K",1
"lib1","SARS-CoV-2","TTGATATACCTTATGT",5,97.18,10.01,-0.76,0.11,2.36,1.02,0,">1 nonsynonymous","N13L P149I S200Y",3
"lib1","SARS-CoV-2","TTGATATATGATGAAG",4,57.61,10.2,-0.57,0.05,2.92,1,0,"1 nonsynonymous","D34T",1
"lib1","SARS-CoV-2","TTGATATTAGGTTTGC",2,50.16,10.73,-0.03,0.05,2.88,1.07,0,">1 nonsynonymous","T140M N151H",2
"lib1","SARS-CoV-2","TTGATATTCTGTGCAG",3,25,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","P54R N64F V71D I80R K128M G152Y K199N",7
"lib1","SARS-CoV-2","TTGATCACAAGGGACC",1,15.41,6,-4.76,2,1.5,1.06,0.01,">1 nonsynonymous","A42W P54K Y91P",3
"lib1","SARS-CoV-2","TTGATCACAATACGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8L C49R V103* C158A T170M",5
"lib1","SARS-CoV-2","TTGATCACCCACCGGC",7,189.96,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","T55L G172D Q176S",3
"lib1","SARS-CoV-2","TTGATCAGCAAACAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M N40M P96F A105Y I142A Y165Q",6
"lib1","SARS-CoV-2","TTGATCAGTCGACATT",2,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E F62G D97P F185L",4
"lib1","SARS-CoV-2","TTGATCATACCCAATA",12,38.47,8.66,-2.1,0.41,1.5,1.11,0.08,">1 nonsynonymous","N13W N107D",2
"lib1","SARS-CoV-2","TTGATCATCTGTATGA",1,75.63,10.75,-0.01,0.1,2.91,1.02,0,"1 nonsynonymous","T201I",1
"lib1","SARS-CoV-2","TTGATCCCAATGAAAA",4,2.58,NA,NA,NA,NA,NA,NA,"stop","V153*",1
"lib1","SARS-CoV-2","TTGATCCCACTATAAT",7,138.57,10.81,0.05,0.08,2.85,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATCCCACTTCAAT",7,66.79,8.51,-2.26,0.25,1.5,1.08,0.02,">1 nonsynonymous","N64P K94F",2
"lib1","SARS-CoV-2","TTGATCCGTCGTCTAA",4,192.87,6,-4.76,2,1.5,1.15,0,">1 nonsynonymous","G9S Y35G K114P Q176L",4
"lib1","SARS-CoV-2","TTGATCGACTTTGACT",1,5.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T V11A P197L",3
"lib1","SARS-CoV-2","TTGATCGCCTCCAACA",4,20.52,6,-4.76,2,1.5,1.27,0.05,">1 nonsynonymous","R73T L131Q T148S F156R C158W",5
"lib1","SARS-CoV-2","TTGATCGCTGGTACCA",6,40.97,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","W106P G152L G166W",3
"lib1","SARS-CoV-2","TTGATCTAATGTTATG",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C K48R F99V E154V",4
"lib1","SARS-CoV-2","TTGATCTGTCATAAAA",6,30.12,6,-4.76,1.57,2.14,1.11,0,">1 nonsynonymous","S43T I104K P149R Y165D G166D",5
"lib1","SARS-CoV-2","TTGATCTTGAAATACA",4,23.82,9.69,-1.08,0.08,2.33,1.05,0,">1 nonsynonymous","A22K T140K Q144L",3
"lib1","SARS-CoV-2","TTGATGAACTAAACAA",2,10.67,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N13G V37T V65E",3
"lib1","SARS-CoV-2","TTGATGAATATAAACT",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q G101S F160P",3
"lib1","SARS-CoV-2","TTGATGAATGTACCGT",1,20.52,10.79,0.02,0.08,2.97,1.01,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","TTGATGACCTCAACTG",1,20.93,10.62,-0.15,0.05,2.89,1.04,0,">1 nonsynonymous","N64R G83N",2
"lib1","SARS-CoV-2","TTGATGAGACCCCGAT",4,11.09,10.04,-0.73,0.08,2.88,1.06,0,"1 nonsynonymous","E135Y",1
"lib1","SARS-CoV-2","TTGATGAGAGTGACTA",3,0,NA,NA,NA,NA,NA,NA,"stop","I72L P82* P96W W106*",4
"lib1","SARS-CoV-2","TTGATGAGTTCATAGG",4,103.52,9.75,-1.01,0.11,1.9,1.12,0,">1 nonsynonymous","G9A V37T S69G",3
"lib1","SARS-CoV-2","TTGATGATCCTCATTT",3,11.6,6,-4.76,2,1.5,1.16,0.07,">1 nonsynonymous","A18E L95K I142T",3
"lib1","SARS-CoV-2","TTGATGATTACCAAAG",1,20.34,6,-4.76,2,3,1.12,0,">1 nonsynonymous","I2S K48L A89N E135D G146C",5
"lib1","SARS-CoV-2","TTGATGCAGCGTTCGG",6,34.05,10.68,-0.08,0.1,2.89,1.09,0,"1 nonsynonymous","I2F",1
"lib1","SARS-CoV-2","TTGATGCCAAGGGACG",4,82.91,10.85,0.09,0.07,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGATGCCAGGACAAA",2,62.48,10.62,-0.15,0.08,2.82,1.13,0,"1 nonsynonymous","Q163T",1
"lib1","SARS-CoV-2","TTGATGCCCCTCTCGC",2,15.49,6,-4.76,2,3,1.14,0.01,"1 nonsynonymous","I88G",1
"lib1","SARS-CoV-2","TTGATGCGTATGTTCA",4,29.63,10.65,-0.11,0.07,2.89,1.07,0,">1 nonsynonymous","D75S N130T",2
"lib1","SARS-CoV-2","TTGATGCTATAGGTTT",3,267.79,9.99,-0.78,0.07,2.18,1.03,0,">1 nonsynonymous","F44R T55I D97H",3
"lib1","SARS-CoV-2","TTGATGGAACCGGGCC",7,45.7,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","A89R D112L T201L",3
"lib1","SARS-CoV-2","TTGATGGCCAGAAGTT",7,0.7,NA,NA,NA,NA,NA,NA,"stop","C61M Y93S T100C S129N F156*",5
"lib1","SARS-CoV-2","TTGATGGCGTTAAACT",9,57.97,6,-4.76,2,3,1.18,0,">1 nonsynonymous","I2V Y50V K87H Y91V W106V G166P",6
"lib1","SARS-CoV-2","TTGATGTATAGCCAGA",3,52.89,10.07,-0.7,0.06,2.33,1.04,0,">1 nonsynonymous","Q163P K199D",2
"lib1","SARS-CoV-2","TTGATGTATATATGAA",3,21.43,6,-4.76,1.71,1.5,1.18,0.03,">1 nonsynonymous","K48I S69K D90H D112R",4
"lib1","SARS-CoV-2","TTGATGTGAAATCTAG",4,1.4,NA,NA,NA,NA,NA,NA,"stop","W23E L57* D68C",3
"lib1","SARS-CoV-2","TTGATGTGCCTAGCGC",1,51.2,10.29,-0.48,0.07,2.92,1,0,">1 nonsynonymous","N171C P197H",2
"lib1","SARS-CoV-2","TTGATTAACCTGGCCG",8,227.35,10.18,-0.58,0.03,2.84,1.02,0,">1 nonsynonymous","D98L F160L",2
"lib1","SARS-CoV-2","TTGATTAATAATAGAA",3,0.85,NA,NA,NA,NA,NA,NA,"stop","G51C E135T P177*",3
"lib1","SARS-CoV-2","TTGATTACCAAGATAA",7,44.16,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","N64K V103A E135V",3
"lib1","SARS-CoV-2","TTGATTACTACATGAC",2,1.12,NA,NA,NA,NA,NA,NA,"stop","V71* Y119G",2
"lib1","SARS-CoV-2","TTGATTAGCTATAAAA",2,23.61,10.59,-0.18,0.08,2.9,1.03,0,">1 nonsynonymous","N40G S45D V71I",3
"lib1","SARS-CoV-2","TTGATTAGCTGTATGG",2,68.14,10.67,-0.1,0.04,2.92,1.06,0,"1 nonsynonymous","T3N",1
"lib1","SARS-CoV-2","TTGATTAGTAGACATT",7,210.15,10.67,-0.1,0.04,2.93,1.01,0,">1 nonsynonymous","N110E S129Y",2
"lib1","SARS-CoV-2","TTGATTATAAAAATCC",11,134.09,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","L5I Y35I G83D R136D",4
"lib1","SARS-CoV-2","TTGATTATCGAGCAAT",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F17K A105E Q168C",4
"lib1","SARS-CoV-2","TTGATTCAGGCCTCAG",1,5.3,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","A14W F62R I142S",3
"lib1","SARS-CoV-2","TTGATTCCTAAACAAG",2,9.09,10.54,-0.22,0.09,2.92,1.07,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","TTGATTCGAATCAATT",3,47.9,6,-4.76,2,3,1.1,0,">1 nonsynonymous","V32Q Q84Y P161L",3
"lib1","SARS-CoV-2","TTGATTCTGTTACTTT",4,26.39,10.59,-0.18,0.04,2.88,1.1,0,"1 nonsynonymous","Y66H",1
"lib1","SARS-CoV-2","TTGATTGAATCCCCCA",4,56.33,10.65,-0.12,0.06,2.93,1.06,0,"1 nonsynonymous","S29K",1
"lib1","SARS-CoV-2","TTGATTGACAAAAGAC",4,28.97,7.03,-3.74,0.35,1.5,1.08,0.03,"1 nonsynonymous","W106P",1
"lib1","SARS-CoV-2","TTGATTGACAACAAAA",3,32.03,10.08,-0.68,0.06,2.9,1.03,0,"1 nonsynonymous","Y121C",1
"lib1","SARS-CoV-2","TTGATTGACCTAGTGT",3,36.05,10.9,0.14,0.07,2.9,1.07,0,">1 nonsynonymous","V37F F62S",2
"lib1","SARS-CoV-2","TTGATTGAGCAGTTTA",5,120.13,8.65,-2.11,0.08,2.55,1.11,0,">1 nonsynonymous","G9P A145P",2
"lib1","SARS-CoV-2","TTGATTGATAAAATCG",3,51.5,10.7,-0.06,0.06,2.94,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGATTGCCAAAATGC",7,46.14,NA,NA,NA,NA,NA,NA,"stop","G9* S41F F47M I88* N130A Q144T L183H",7
"lib1","SARS-CoV-2","TTGATTGCTTCCTAAT",2,9.55,7.52,-3.24,0.22,1.82,1.07,0.01,">1 nonsynonymous","G86R N130V",2
"lib1","SARS-CoV-2","TTGATTGGGAGGTACC",2,76.3,10.66,-0.11,0.07,2.86,1.1,0,">1 nonsynonymous","F8Y V173I",2
"lib1","SARS-CoV-2","TTGATTGGTGAAGAAA",3,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48I P54T Y91L T100N C102R L131G",6
"lib1","SARS-CoV-2","TTGATTGTTAATGCAA",6,5.46,NA,NA,NA,NA,NA,NA,"stop","S69E N118I E135*",3
"lib1","SARS-CoV-2","TTGATTTCAATAGTAG",3,44.25,10.78,0.02,0.06,2.93,1.04,0,">1 nonsynonymous","T3H T100Y",2
"lib1","SARS-CoV-2","TTGATTTCACTGAGGC",6,56.68,6.08,-4.68,0.87,1.5,1.14,0.02,">1 nonsynonymous","W23V S45C K114C G166I",4
"lib1","SARS-CoV-2","TTGATTTGCGATTATA",4,32.51,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","Y35P S43P D68A F134D F167G N171D",6
"lib1","SARS-CoV-2","TTGCAAAAACACCCAA",2,42.45,10.77,0.01,0.05,2.87,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCAAAAAGGGACTT",3,39.59,9.77,-0.99,0.1,2.18,1.07,0,">1 nonsynonymous","I88V E141A G152L",3
"lib1","SARS-CoV-2","TTGCAAAAATTGTTAT",1,2.15,NA,NA,NA,NA,NA,NA,"stop","T100* W106K K199I",3
"lib1","SARS-CoV-2","TTGCAAAAATTTACAG",6,86.86,10.76,0,0.06,2.96,1.03,0,"1 nonsynonymous","Y39A",1
"lib1","SARS-CoV-2","TTGCAAAACAAACTAA",5,8.87,6.04,-4.72,1.25,1.5,1.16,0.02,">1 nonsynonymous","N4K C49Y C61T K128M",4
"lib1","SARS-CoV-2","TTGCAAAACAGGTCAT",6,2.43,NA,NA,NA,NA,NA,NA,"stop","L5S V37F P54R P82S Q163*",5
"lib1","SARS-CoV-2","TTGCAAAACCTCCGAC",1,15.69,6,-4.76,2,1.5,1.12,0.02,">1 nonsynonymous","S41Q A89L D98K N151E",4
"lib1","SARS-CoV-2","TTGCAAAAGGTAAAGT",12,65.78,7.98,-2.79,0.38,1.5,1,0.06,">1 nonsynonymous","I88D C195P",2
"lib1","SARS-CoV-2","TTGCAAACTACGTTCA",3,2.83,NA,NA,NA,NA,NA,NA,"stop","I104* R124C",2
"lib1","SARS-CoV-2","TTGCAAAGCAATGGTT",3,0.03,NA,NA,NA,NA,NA,NA,"stop","T46S F62* T148A P161T Y175S",5
"lib1","SARS-CoV-2","TTGCAAAGCCTATATG",2,61.46,8.97,-1.79,0.09,2.27,1.11,0,">1 nonsynonymous","P7F K56P G174Q",3
"lib1","SARS-CoV-2","TTGCAAAGTCCGTGGG",5,67.74,9.92,-0.85,0.11,1.9,1.09,0,">1 nonsynonymous","I2V W106E P197Q",3
"lib1","SARS-CoV-2","TTGCAAATAGAGGACA",13,156.53,10.16,-0.61,0.04,2.92,1.02,0,"1 nonsynonymous","E154L",1
"lib1","SARS-CoV-2","TTGCAAATGATACGGG",7,114.71,9.83,-0.94,0.11,2.22,1.05,0,"1 nonsynonymous","R127N",1
"lib1","SARS-CoV-2","TTGCAAATTCAAATTC",4,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I N107M",2
"lib1","SARS-CoV-2","TTGCAACAAGGTCTTA",4,54.31,10.11,-0.65,0.07,2.41,1.03,0,"1 nonsynonymous","E76T",1
"lib1","SARS-CoV-2","TTGCAACACCAGCTCA",1,34.83,7.94,-2.83,0.33,1.5,1.15,0.03,">1 nonsynonymous","P96S Y143C",2
"lib1","SARS-CoV-2","TTGCAACCAAACTAAA",4,12.59,6,-4.76,2,1.5,1.25,0.04,">1 nonsynonymous","V103E G166Q",2
"lib1","SARS-CoV-2","TTGCAACCCCAATGGA",2,43.98,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I2H G101L S113L E141Q",4
"lib1","SARS-CoV-2","TTGCAACCTCACCACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2R",1
"lib1","SARS-CoV-2","TTGCAACCTGTGAAAA",3,25.58,9.19,-1.57,0.19,1.5,1.02,0.02,">1 nonsynonymous","P7S V77E",2
"lib1","SARS-CoV-2","TTGCAACGCTACAGTT",4,110.24,9.23,-1.54,0.07,2.86,1.12,0,">1 nonsynonymous","F12L Y119T P197T",3
"lib1","SARS-CoV-2","TTGCAACTGTATCAAA",2,27.24,6,-4.76,2,3,1.1,0.01,">1 nonsynonymous","L95F Y119G E135F N157L",4
"lib1","SARS-CoV-2","TTGCAACTGTCTGGAA",1,50.45,10.7,-0.06,0.1,2.85,1.07,0,"1 nonsynonymous","V173I",1
"lib1","SARS-CoV-2","TTGCAACTTGTAACGA",1,31.82,6.13,-4.64,1,1.5,1.18,0.01,">1 nonsynonymous","N1H V37H A81S D90S D112L",5
"lib1","SARS-CoV-2","TTGCAAGAAAATAGTT",4,113.19,6,-4.76,1.4,1.5,1.17,0.01,">1 nonsynonymous","V20K D98K A145M Y178D",4
"lib1","SARS-CoV-2","TTGCAAGACTGACCGC",3,41.01,10.09,-0.68,0.05,2.84,1.01,0,">1 nonsynonymous","K26T P96D K114S T148S",4
"lib1","SARS-CoV-2","TTGCAAGCATTAACAG",6,2.69,NA,NA,NA,NA,NA,NA,"stop","C6S L57* Y175V",3
"lib1","SARS-CoV-2","TTGCAAGCATTCGCAT",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D P82C S113A E154I",4
"lib1","SARS-CoV-2","TTGCAAGTAAAACTTG",1,24.98,10.8,0.03,0.06,2.99,1,0,"1 nonsynonymous","L111W",1
"lib1","SARS-CoV-2","TTGCAATAACCCAACG",15,190.45,6.44,-4.32,0.4,1.5,1.14,0.01,">1 nonsynonymous","I2K T55N C61A G117N I138S G146T",6
"lib1","SARS-CoV-2","TTGCAATAAGTAATCT",5,29.63,6,-4.76,2,1.5,1.33,0.03,"1 nonsynonymous","F99C",1
"lib1","SARS-CoV-2","TTGCAATAATCAGGTA",3,56.24,10.07,-0.7,0.1,2.52,1.03,0,">1 nonsynonymous","N58L D90L K114Q",3
"lib1","SARS-CoV-2","TTGCAATAGACAAAAC",1,2.57,NA,NA,NA,NA,NA,NA,"stop","N151I Q176* K198R",3
"lib1","SARS-CoV-2","TTGCAATAGTACCCCA",1,14.98,10.89,0.12,0.08,2.9,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCAATATAAGTAAG",4,89.86,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","N107M G155F",2
"lib1","SARS-CoV-2","TTGCAATCAACACACC",5,84,10.74,-0.03,0.04,2.96,1.03,0,"1 nonsynonymous","E141S",1
"lib1","SARS-CoV-2","TTGCAATCATGAGAGG",4,3.44,NA,NA,NA,NA,NA,NA,"stop","R73* A89V P133L",3
"lib1","SARS-CoV-2","TTGCAATCTAATGTGG",2,7.27,6,-4.76,2,1.5,1.34,0.08,">1 nonsynonymous","N4I V77N",2
"lib1","SARS-CoV-2","TTGCAATCTATACCTA",2,43.52,10.87,0.11,0.06,2.9,1.07,0,"1 nonsynonymous","Y35W",1
"lib1","SARS-CoV-2","TTGCAATGCACACGCA",6,203.95,6,-4.76,1.43,1.5,1.13,0.01,">1 nonsynonymous","N40F G86L N107F L122S Q163C P177I",6
"lib1","SARS-CoV-2","TTGCAATTAATAAAGC",8,95.24,10.7,-0.07,0.07,2.82,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCAATTGCGATTTA",5,45.69,9.83,-0.93,0.09,2.06,1.04,0,"1 nonsynonymous","F99I",1
"lib1","SARS-CoV-2","TTGCAATTTGACGGCC",14,169.33,10.63,-0.13,0.04,2.92,1.02,0,"1 nonsynonymous","G116T",1
"lib1","SARS-CoV-2","TTGCACAAAGAATGCC",7,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I Y93F T100S S200V",4
"lib1","SARS-CoV-2","TTGCACAATACCCCGT",2,5.57,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib1","SARS-CoV-2","TTGCACAATTTCCAAT",11,172.8,10.2,-0.56,0.06,2.84,1,0,">1 nonsynonymous","I2L E10V A105S",3
"lib1","SARS-CoV-2","TTGCACACGATAAAAA",3,15.61,10.65,-0.11,0.21,2.68,1.04,0.02,"1 nonsynonymous","C61Y",1
"lib1","SARS-CoV-2","TTGCACACTAAAACTA",13,1.03,NA,NA,NA,NA,NA,NA,"stop","S19V S43Y T55*",3
"lib1","SARS-CoV-2","TTGCACACTAACAGGC",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P D112P G146A",3
"lib1","SARS-CoV-2","TTGCACATTAAGTTAC",2,33.05,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","Y93H D98R V103L D137C K199M",5
"lib1","SARS-CoV-2","TTGCACCCACGGAAGT",1,106.23,10.73,-0.03,0.06,2.92,1.05,0,">1 nonsynonymous","D97I T201G",2
"lib1","SARS-CoV-2","TTGCACCCGCGCAGTC",3,33.3,8.52,-2.24,0.08,1.88,1.07,0,">1 nonsynonymous","C61I G83N Y91A D98N T140H S147V",6
"lib1","SARS-CoV-2","TTGCACCCTACTTAAC",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V V181N",2
"lib1","SARS-CoV-2","TTGCACCTAAGGAATG",6,0.89,NA,NA,NA,NA,NA,NA,"stop","R16* C150M",2
"lib1","SARS-CoV-2","TTGCACGATGCAACAC",5,60.37,6,-4.76,2,2.71,1.15,0,">1 nonsynonymous","I2Y V52L S53P G86V D90P T201I",6
"lib1","SARS-CoV-2","TTGCACGCAACAAGAA",9,104.97,7.33,-3.43,0.18,1.69,1.21,0.01,">1 nonsynonymous","I2F S36M S129N I142R T170H",5
"lib1","SARS-CoV-2","TTGCACTATAAACCTG",9,10.35,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A89V V103Q F160G",3
"lib1","SARS-CoV-2","TTGCACTGAAACACCA",4,38.14,10.01,-0.76,0.09,2.78,1.02,0,">1 nonsynonymous","A33Y D98E Y123Q G174F",4
"lib1","SARS-CoV-2","TTGCACTTCAAGAAGA",6,161.22,10.56,-0.21,0.04,2.88,1.06,0,">1 nonsynonymous","S43F P149Y",2
"lib1","SARS-CoV-2","TTGCAGACCTACCTAA",3,7.29,9.52,-1.24,0.32,1.5,1.18,0.05,">1 nonsynonymous","F44T C61W D97G E141M",4
"lib1","SARS-CoV-2","TTGCAGAGTATCAACC",1,8.11,10.62,-0.15,0.06,3,1,0,">1 nonsynonymous","P54H L60Y N120L L131I",4
"lib1","SARS-CoV-2","TTGCAGCATTAATATC",5,2.1,NA,NA,NA,NA,NA,NA,"stop","L38A D98Y F126S P133*",4
"lib1","SARS-CoV-2","TTGCAGCATTCGATAG",1,0.95,NA,NA,NA,NA,NA,NA,"stop","G9* N24T Y66P N157L",4
"lib1","SARS-CoV-2","TTGCAGCGAAAGCAAG",4,87.15,9.07,-1.69,0.09,2.71,1.13,0,">1 nonsynonymous","S36E I104T E154F",3
"lib1","SARS-CoV-2","TTGCAGTCAAAAAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S L131K Y143* Y165L",4
"lib1","SARS-CoV-2","TTGCAGTCCTATTGCA",2,50.03,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","Y143P Q168I",2
"lib1","SARS-CoV-2","TTGCAGTTTCACTCAT",8,261.1,10.68,-0.08,0.05,2.87,1.06,0,"1 nonsynonymous","D98K",1
"lib1","SARS-CoV-2","TTGCATAAATATTAGC",6,90.81,6.01,-4.75,0.84,1.5,1.13,0.01,">1 nonsynonymous","V32W S69L K87N D97F Y123L R127C T148I",7
"lib1","SARS-CoV-2","TTGCATAGGACCATAC",2,28.8,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A14Q S36L Y66N G86W G166P",5
"lib1","SARS-CoV-2","TTGCATCCCGAACCAC",7,96.79,6.38,-4.39,0.43,1.5,1.17,0.01,">1 nonsynonymous","R27P Y35M C158S",3
"lib1","SARS-CoV-2","TTGCATCCTGAATTCA",1,9.77,10.52,-0.25,0.28,2.83,1.16,0.02,"1 nonsynonymous","L5K",1
"lib1","SARS-CoV-2","TTGCATCTGCCAGAAG",5,41.17,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","F8V G101C",2
"lib1","SARS-CoV-2","TTGCATGCCTACGTAC",3,34.28,7.03,-3.73,0.36,1.5,1.17,0.03,">1 nonsynonymous","N118W R127G",2
"lib1","SARS-CoV-2","TTGCATGCGCAACCGA",5,2.12,NA,NA,NA,NA,NA,NA,"stop","T15* G51V L125W",3
"lib1","SARS-CoV-2","TTGCATGTATCCCGAC",2,17.34,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","N130F P161I N171I",3
"lib1","SARS-CoV-2","TTGCATGTCACGTTAC",5,85.16,6,-4.76,2,3,1.12,0,">1 nonsynonymous","L57C G86S N107V",3
"lib1","SARS-CoV-2","TTGCATTAGATACTCT",2,24.03,6.51,-4.25,0.54,1.5,1.06,0.03,">1 nonsynonymous","D34L E135P Q176W",3
"lib1","SARS-CoV-2","TTGCATTCATAACACA",1,21.76,6,-4.76,2,3,1.19,0,">1 nonsynonymous","I28L D68A D97K Y121H P149M",5
"lib1","SARS-CoV-2","TTGCATTCGGATAATC",3,11.1,8.29,-2.47,0.38,1.5,1.05,0.04,">1 nonsynonymous","V11S Q168V",2
"lib1","SARS-CoV-2","TTGCATTGTACGAGCC",3,8.45,NA,NA,NA,NA,NA,NA,"stop","F8C S53D Q84*",3
"lib1","SARS-CoV-2","TTGCATTTCGTGTTCA",1,5.14,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T3F D90Q D137P H189L",4
"lib1","SARS-CoV-2","TTGCCAAAAATCCAAT",8,75.6,6.05,-4.71,1.32,1.5,1.25,0.04,">1 nonsynonymous","R16V Q84C D90S D98L Y123T T140M",6
"lib1","SARS-CoV-2","TTGCCAAACGAGCTTG",2,49.37,10.36,-0.41,0.08,2.98,1.01,0,">1 nonsynonymous","N24D L38V",2
"lib1","SARS-CoV-2","TTGCCAAATGATAACA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","L38* L57H Y66F K94D",4
"lib1","SARS-CoV-2","TTGCCAAATTTTACGA",1,18.11,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","D90P",1
"lib1","SARS-CoV-2","TTGCCAACAATGCACC",1,55.75,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N4H A18E T55S Y91M G152T G172M P197S T201I",8
"lib1","SARS-CoV-2","TTGCCAACATAAACAA",1,7.47,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","K48H P96W C102K P149I",4
"lib1","SARS-CoV-2","TTGCCAACTCTCCGGA",5,66.39,8.4,-2.36,0.32,1.5,1.12,0.04,">1 nonsynonymous","G86S Y159W",2
"lib1","SARS-CoV-2","TTGCCAATACGAATGA",1,9.35,10.56,-0.21,0.17,2.83,1.11,0.01,"1 nonsynonymous","K128S",1
"lib1","SARS-CoV-2","TTGCCACAACGGGCAA",4,28.53,6,-4.76,1.07,3,1.13,0,">1 nonsynonymous","N4S F99S S113L K128Y E141S R179Y T201G",7
"lib1","SARS-CoV-2","TTGCCACCAGTTAGAC",3,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S R124A V173L",3
"lib1","SARS-CoV-2","TTGCCACGAACCTCGA",2,39.66,8.81,-1.95,0.06,2.69,1.06,0,">1 nonsynonymous","D98L N109L G166T",3
"lib1","SARS-CoV-2","TTGCCACGACATCCCA",5,55.9,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","A14I V65W S113K S164L",4
"lib1","SARS-CoV-2","TTGCCACGATGATGAA",3,2.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93S",1
"lib1","SARS-CoV-2","TTGCCACGTATCTACC",5,116.65,10.84,0.08,0.07,2.94,1.03,0,"1 nonsynonymous","T201L",1
"lib1","SARS-CoV-2","TTGCCACTCCAATGTC",1,87.78,10,-0.77,0.13,2.3,1.08,0.01,">1 nonsynonymous","A18K D59S L95V H189V K198I",5
"lib1","SARS-CoV-2","TTGCCACTCTACGACG",26,13.17,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib1","SARS-CoV-2","TTGCCACTGTCGTCAC",3,116.86,10.05,-0.71,0.1,2.4,1.02,0,"1 nonsynonymous","A14P",1
"lib1","SARS-CoV-2","TTGCCACTTGGCAAGG",3,1.49,NA,NA,NA,NA,NA,NA,"stop","F17Q W23K V37* L60K Y91I V103W R127L P133G G146I T201Q",10
"lib1","SARS-CoV-2","TTGCCAGATTCATTCG",8,88.81,10.79,0.02,0.06,2.9,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCCAGCAAACAAAG",5,66.48,10.75,-0.02,0.07,2.88,1.1,0,"1 nonsynonymous","S129E",1
"lib1","SARS-CoV-2","TTGCCAGCAATGACCA",4,55.2,10.08,-0.68,0.09,2.19,1.04,0,"1 nonsynonymous","N13V",1
"lib1","SARS-CoV-2","TTGCCAGGCGTTTTGA",1,22.62,7.03,-3.74,0.47,1.5,1.21,0.05,">1 nonsynonymous","T3A R127V F167L G172E",4
"lib1","SARS-CoV-2","TTGCCATAAGTAAATT",3,317.21,10.52,-0.25,0.04,2.89,1.06,0,">1 nonsynonymous","N120I A192S",2
"lib1","SARS-CoV-2","TTGCCATACATAATTA",2,17.18,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V37A G83F I88F D98Q E154G",5
"lib1","SARS-CoV-2","TTGCCATAGCAAAAAT",1,61.69,8.71,-2.06,0.1,2.8,1.09,0,">1 nonsynonymous","C61F V77L G83S N130R F156E",5
"lib1","SARS-CoV-2","TTGCCATAGCTTACAC",3,17.06,10.67,-0.09,0.08,2.88,1.08,0,">1 nonsynonymous","D98R A190E",2
"lib1","SARS-CoV-2","TTGCCATCCCCTAATG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N V103G Y143W G172V P177I K198T",6
"lib1","SARS-CoV-2","TTGCCCAAAAACTCGT",3,5.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33F I88Y",2
"lib1","SARS-CoV-2","TTGCCCAAATTGTGCG",1,15.87,6,-4.76,2,1.5,1.3,0.05,">1 nonsynonymous","G9N G51R L60N N151D L162R",5
"lib1","SARS-CoV-2","TTGCCCACTAATATGA",4,95.96,9.86,-0.91,0.06,2.86,1.05,0,">1 nonsynonymous","D98H N120A S147K Q168N",4
"lib1","SARS-CoV-2","TTGCCCAGAAAACCAA",9,131.37,9.22,-1.54,0.1,2.8,1.16,0,"1 nonsynonymous","Y119L",1
"lib1","SARS-CoV-2","TTGCCCAGGAACCGAT",13,8.76,NA,NA,NA,NA,NA,NA,"stop","W106Q T148F V153* N171I",4
"lib1","SARS-CoV-2","TTGCCCCATACCAACA",1,3.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTGCCCCTCTAGCCTT",1,13.29,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R78L N118T S129L N157A H189N",5
"lib1","SARS-CoV-2","TTGCCCCTTACTTGTC",3,1.22,NA,NA,NA,NA,NA,NA,"stop","A105* N118Y R124V K199S",4
"lib1","SARS-CoV-2","TTGCCCGAAGAGTAAT",2,20.08,10.94,0.18,0.09,2.92,1.02,0,">1 nonsynonymous","N130L T201S",2
"lib1","SARS-CoV-2","TTGCCCGAATACATTC",3,71.13,10.3,-0.46,0.06,2.91,1.05,0,">1 nonsynonymous","T63S S129L",2
"lib1","SARS-CoV-2","TTGCCCGAGCTGACCA",1,16.42,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P96R N107C Y165R",3
"lib1","SARS-CoV-2","TTGCCCGAGTTTCAAG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","K114* Y175K G196R",3
"lib1","SARS-CoV-2","TTGCCCGATATCAGCA",10,540.47,9.5,-1.27,0.05,2.82,1.08,0,">1 nonsynonymous","D97K G117A",2
"lib1","SARS-CoV-2","TTGCCCTACACTAACG",5,9.6,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y93R V153H G174R",3
"lib1","SARS-CoV-2","TTGCCCTCATGGAAAA",2,112.23,10.78,0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCCGAAACAACGAA",3,44.48,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","A14S I28M D34I T100L R127H G146W",6
"lib1","SARS-CoV-2","TTGCCGAACAAAGAAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","G9M A33* L60R A81R G86I N107M V180G",7
"lib1","SARS-CoV-2","TTGCCGAATTTAAAGA",6,86.81,10.66,-0.1,0.05,2.89,1.06,0,"1 nonsynonymous","D98E",1
"lib1","SARS-CoV-2","TTGCCGAGGTAACTGG",5,96.39,10.13,-0.64,0.03,2.91,1.04,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","TTGCCGATAAGTACGT",6,2.33,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib1","SARS-CoV-2","TTGCCGATCACCCAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* S43K E76S",3
"lib1","SARS-CoV-2","TTGCCGATGAGTACGA",2,13.93,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","V71I K114V Y121I C158M T201S",5
"lib1","SARS-CoV-2","TTGCCGCAAATGCCTA",1,14.88,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6S Y93P",2
"lib1","SARS-CoV-2","TTGCCGCAATAGTAGA",1,24.85,8.22,-2.54,0.33,1.5,1.08,0.03,">1 nonsynonymous","P54L R127H F185V",3
"lib1","SARS-CoV-2","TTGCCGCCTTAAACTA",2,38.51,10.64,-0.12,0.1,2.95,1.06,0,">1 nonsynonymous","G152M V173I",2
"lib1","SARS-CoV-2","TTGCCGGCCAAGTCGT",1,14.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116E N130I D137Y G155I",4
"lib1","SARS-CoV-2","TTGCCGGCTTATCGTG",3,131.15,7.53,-3.23,0.22,1.5,1.14,0.01,">1 nonsynonymous","F8C R78P L125D",3
"lib1","SARS-CoV-2","TTGCCGGTGTAACTTT",8,133.72,7.48,-3.28,0.26,1.5,1.08,0.02,">1 nonsynonymous","Q84Y G172S",2
"lib1","SARS-CoV-2","TTGCCGTAAATCGCCC",9,29.05,6.13,-4.64,0.51,1.5,1.12,0.01,">1 nonsynonymous","D59A A81D D98L S113V",4
"lib1","SARS-CoV-2","TTGCCGTGATTGCCAC",6,100.65,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F8C F17R T46I F99C Y119H Y123S",6
"lib1","SARS-CoV-2","TTGCCGTGCCCGGTGT",3,33.55,6,-4.76,2,1.5,1.19,0.01,"1 nonsynonymous","V103S",1
"lib1","SARS-CoV-2","TTGCCGTTAAAACGTT",1,6.87,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","W23L K114P",2
"lib1","SARS-CoV-2","TTGCCTAAAACCTATA",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S N40D S45D P96T L183P",5
"lib1","SARS-CoV-2","TTGCCTAAAGCATACC",9,5.96,NA,NA,NA,NA,NA,NA,"stop","Y123I G152*",2
"lib1","SARS-CoV-2","TTGCCTAATCGGGGGG",2,6.73,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","D34A S41N K87M G117R Q176M V181L",6
"lib1","SARS-CoV-2","TTGCCTAATCTAAACC",2,27.14,10.69,-0.07,0.07,2.89,1.03,0,"1 nonsynonymous","T85Q",1
"lib1","SARS-CoV-2","TTGCCTATGGGAAGGT",2,19.36,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I88K",1
"lib1","SARS-CoV-2","TTGCCTGACAGGCCTA",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105D",1
"lib1","SARS-CoV-2","TTGCCTGGAAAATGAC",2,48.92,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F17V L38N L57P K87S G174L",5
"lib1","SARS-CoV-2","TTGCCTTACAAATAGC",1,11.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68K G83E",2
"lib1","SARS-CoV-2","TTGCCTTAGGTAATGC",2,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H I88P K199D",3
"lib1","SARS-CoV-2","TTGCCTTATTATGGGC",3,17.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F17L Y66A G83W P96R",4
"lib1","SARS-CoV-2","TTGCCTTTACAGCACC",14,93.58,6,-4.76,1.9,1.5,1.12,0.01,">1 nonsynonymous","F99K L122R K128Y",3
"lib1","SARS-CoV-2","TTGCGAAAAGTAAAAC",1,19.37,10.11,-0.65,0.1,2.66,1.02,0.01,">1 nonsynonymous","R136Y T148S",2
"lib1","SARS-CoV-2","TTGCGAACCGCACGAG",2,0.37,NA,NA,NA,NA,NA,NA,"stop","D34* L122V V153P",3
"lib1","SARS-CoV-2","TTGCGAACTAACTGCT",6,101.28,10.78,0.02,0.06,2.87,1.09,0,"1 nonsynonymous","V153L",1
"lib1","SARS-CoV-2","TTGCGAAGTCACCTAA",8,0.48,NA,NA,NA,NA,NA,NA,"stop","G116* Y175T",2
"lib1","SARS-CoV-2","TTGCGAAGTGAAACGT",1,26.75,6.27,-4.5,0.86,1.5,1.13,0.04,">1 nonsynonymous","W23K T148P",2
"lib1","SARS-CoV-2","TTGCGAATCATGATCA",2,13.4,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V65F Y119V P149L E154D V182A",5
"lib1","SARS-CoV-2","TTGCGACGAACTGTAA",13,5.29,NA,NA,NA,NA,NA,NA,"stop","C6* I138D A145F",3
"lib1","SARS-CoV-2","TTGCGACGCTATAGTC",6,91.26,10.6,-0.16,0.04,2.96,1,0,"1 nonsynonymous","Y123A",1
"lib1","SARS-CoV-2","TTGCGAGAAGGTACCG",5,74.86,6,-4.76,2,1.5,1.21,0.02,"1 nonsynonymous","C158P",1
"lib1","SARS-CoV-2","TTGCGAGCGCCAAACG",3,16.73,6.89,-3.88,0.57,1.5,1.22,0.07,">1 nonsynonymous","V77E Y123A",2
"lib1","SARS-CoV-2","TTGCGATAAATCACCG",7,1.91,NA,NA,NA,NA,NA,NA,"stop","G146M V180P C195*",3
"lib1","SARS-CoV-2","TTGCGATACAAGCACG",5,14.4,6,-4.76,2,3,1.08,0,">1 nonsynonymous","E10R F99V L122F N157L S200W",5
"lib1","SARS-CoV-2","TTGCGATCCAACTGTG",6,59.8,6,-4.76,1.77,1.5,1.19,0.01,">1 nonsynonymous","E10W L38R G101E",3
"lib1","SARS-CoV-2","TTGCGCACCAACTTTG",1,1.75,NA,NA,NA,NA,NA,NA,"stop","T85* G117E",2
"lib1","SARS-CoV-2","TTGCGCATAGACCTTA",10,135.89,10.48,-0.29,0.05,2.96,1,0,">1 nonsynonymous","F156A V173Y",2
"lib1","SARS-CoV-2","TTGCGCCCTAATCAGA",1,54.24,10.66,-0.11,0.04,2.88,1.1,0,">1 nonsynonymous","L5P N151I",2
"lib1","SARS-CoV-2","TTGCGCTAAGATAAGG",1,44.93,6,-4.76,2,3,1.14,0,">1 nonsynonymous","C6H G86T A190P",3
"lib1","SARS-CoV-2","TTGCGCTAATTAGTCG",2,10.94,10.59,-0.18,0.12,2.76,1.13,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGCGCTTATACTAAT",4,107.66,10.16,-0.61,0.06,2.79,1,0,"1 nonsynonymous","F47A",1
"lib1","SARS-CoV-2","TTGCGCTTCAGCCGGT",5,33.16,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R73V W106L",2
"lib1","SARS-CoV-2","TTGCGCTTGAACACGT",1,10.19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4F P177Q",2
"lib1","SARS-CoV-2","TTGCGGAAATTAATGA",4,60.01,10.77,0,0.08,2.87,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCGGAACCATCTAC",3,36.15,6.07,-4.7,1.01,1.5,1.14,0.03,"1 nonsynonymous","I80W",1
"lib1","SARS-CoV-2","TTGCGGACAATAGTTA",5,1.65,NA,NA,NA,NA,NA,NA,"stop","V37Y G74* D112* K128H",4
"lib1","SARS-CoV-2","TTGCGGACATAGGTAC",7,119.84,10.22,-0.55,0.06,2.69,1.03,0,">1 nonsynonymous","E10C N110L",2
"lib1","SARS-CoV-2","TTGCGGACCAAATCCC",8,69.94,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V37S N92V G196R",3
"lib1","SARS-CoV-2","TTGCGGCACTCATCGT",2,38.18,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","N24M G51S W106A Y119N",4
"lib1","SARS-CoV-2","TTGCGGGAATTTTGAA",12,17.79,6,-4.76,2,1.5,1.27,0.03,">1 nonsynonymous","C6A N13H C158R",3
"lib1","SARS-CoV-2","TTGCGGGATTTACCCC",3,73.86,10.79,0.03,0.06,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCGGGGACACCCAT",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D K26R Y35I G83A P169M",5
"lib1","SARS-CoV-2","TTGCGGTCACCAACAA",4,76.75,8.59,-2.17,0.15,1.5,1.16,0.01,">1 nonsynonymous","K26A S43P S139I P149H",4
"lib1","SARS-CoV-2","TTGCGGTTTCCATAAA",2,5.68,11.1,0.33,0.09,2.9,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCGTAAACCAAGCT",8,95.58,10.23,-0.53,0.07,2.62,1,0,">1 nonsynonymous","K56N L95I T100L R136L",4
"lib1","SARS-CoV-2","TTGCGTACTTGAATCC",3,92.16,10.22,-0.54,0.07,2.82,1.03,0,">1 nonsynonymous","S53F T148C T201M",3
"lib1","SARS-CoV-2","TTGCGTATTGGCCGGA",1,231.95,6,-4.76,1.62,1.5,1.21,0.02,">1 nonsynonymous","D59L D90Q G166H V173S",4
"lib1","SARS-CoV-2","TTGCGTCATTATAAGT",8,72.33,6.17,-4.6,0.57,1.5,1.15,0.01,">1 nonsynonymous","C158S G166S",2
"lib1","SARS-CoV-2","TTGCGTCTAAAAGCGT",11,121,10.43,-0.34,0.04,2.94,1,0,">1 nonsynonymous","S43T N107P",2
"lib1","SARS-CoV-2","TTGCGTTCAAACGATG",3,21.51,8.5,-2.27,0.19,1.74,1.1,0.01,"1 nonsynonymous","G86E",1
"lib1","SARS-CoV-2","TTGCGTTCATACTATA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","S129F R136I P149R F167K V173*",5
"lib1","SARS-CoV-2","TTGCGTTCCACATTGT",4,18.32,6.73,-4.03,0.35,1.5,1.19,0.03,">1 nonsynonymous","C158A N171S",2
"lib1","SARS-CoV-2","TTGCGTTTGCACTATT",1,2.62,NA,NA,NA,NA,NA,NA,"stop","C61M D68V D75L Q84F F126R D137*",6
"lib1","SARS-CoV-2","TTGCTAAAGGCGCAAT",2,23.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L S41N G86H S184H",4
"lib1","SARS-CoV-2","TTGCTAAATTAGTCCC",1,24.1,10.57,-0.2,0.08,2.84,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTAAGCCCAATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45K T100G K114L",3
"lib1","SARS-CoV-2","TTGCTAATACTACGAA",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M T100W V115L T140P",4
"lib1","SARS-CoV-2","TTGCTAATGATTAAAC",6,31.3,6,-4.76,2,3,1.3,0.01,">1 nonsynonymous","F44L G51S C61R A81I F134L",5
"lib1","SARS-CoV-2","TTGCTAATGCCATCAG",2,34.69,9.5,-1.26,0.11,1.95,1.18,0,">1 nonsynonymous","E10P A105M",2
"lib1","SARS-CoV-2","TTGCTAATTGGCTGGC",2,27.7,6,-4.76,2,3,1.15,0,">1 nonsynonymous","G9P N58V K94G Y123K P161S",5
"lib1","SARS-CoV-2","TTGCTACACAATGAGA",2,45.52,10.81,0.05,0.06,2.92,1.01,0,"1 nonsynonymous","V115L",1
"lib1","SARS-CoV-2","TTGCTACCCTTGAGCA",2,24.78,10.13,-0.64,0.07,2.81,1.02,0,">1 nonsynonymous","V37M W106Y P149T",3
"lib1","SARS-CoV-2","TTGCTACGACCACTTT",2,59.21,10.86,0.1,0.07,2.93,1.03,0,">1 nonsynonymous","I2M D98N",2
"lib1","SARS-CoV-2","TTGCTACGTACACCGT",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105G L131G G146W K198W",4
"lib1","SARS-CoV-2","TTGCTACTCAAGACTA",4,80.62,9.25,-1.52,0.12,2.42,1.09,0.01,"1 nonsynonymous","N107M",1
"lib1","SARS-CoV-2","TTGCTACTTTAAAATC",7,80.13,10.85,0.09,0.08,2.85,1.11,0,"1 nonsynonymous","N171Y",1
"lib1","SARS-CoV-2","TTGCTAGAACAAGAAA",2,185.75,6,-4.76,2,1.5,1.28,0.02,">1 nonsynonymous","D59A S69V D98F S129K G146L Q168D Q176P",7
"lib1","SARS-CoV-2","TTGCTAGATCATTCCT",1,9.97,7.96,-2.8,0.4,1.5,1,0.07,">1 nonsynonymous","T3V Y121T E141P",3
"lib1","SARS-CoV-2","TTGCTAGCTTATAAAA",1,26.93,9.87,-0.9,0.1,2.24,1,0.01,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","TTGCTATAATGAGACA",5,23.31,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","F160I V180S",2
"lib1","SARS-CoV-2","TTGCTATATACACAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","E10L E76I N107S E141* P149N",5
"lib1","SARS-CoV-2","TTGCTATCATAGCGTG",1,10.45,10.86,0.1,0.11,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTATTTTGCTTAA",1,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98P",1
"lib1","SARS-CoV-2","TTGCTCAATGTGCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5Q N13V N118* I142Q G155V",5
"lib1","SARS-CoV-2","TTGCTCACCCGAAAAC",10,135.71,10.57,-0.19,0.04,2.87,1.06,0,"1 nonsynonymous","A42L",1
"lib1","SARS-CoV-2","TTGCTCATCTTGAGGC",2,9.73,8.56,-2.21,0.48,1.5,1.25,0.06,"1 nonsynonymous","Y50E",1
"lib1","SARS-CoV-2","TTGCTCCATAATACCG",4,17.91,9.43,-1.33,0.18,1.83,1.16,0.01,">1 nonsynonymous","S45F V115L I138Y",3
"lib1","SARS-CoV-2","TTGCTCCGTTTATGCG",5,163.08,9.47,-1.29,0.07,2.59,1.08,0,">1 nonsynonymous","L111V Q176L",2
"lib1","SARS-CoV-2","TTGCTCGAGCGATTGA",5,49.29,10.71,-0.05,0.07,2.86,1.05,0,"1 nonsynonymous","S41Y",1
"lib1","SARS-CoV-2","TTGCTCTATACAGTAA",1,30.28,10.74,-0.02,0.06,2.95,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTCTCAATACCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","A22S G166P V181*",3
"lib1","SARS-CoV-2","TTGCTCTTCCATTATA",7,42.24,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G74N N157W T201A",3
"lib1","SARS-CoV-2","TTGCTGAAACGGACTT",2,60.43,10.79,0.03,0.06,2.93,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTGAAAGTATCGT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28V Y165S K198Q",3
"lib1","SARS-CoV-2","TTGCTGAACATAGGCC",2,57.84,8.57,-2.19,0.1,2.96,1.05,0,">1 nonsynonymous","S43L K87E Y119T",3
"lib1","SARS-CoV-2","TTGCTGACAGGCACGA",8,104.14,10.52,-0.25,0.05,2.9,1.02,0,">1 nonsynonymous","T63A G83A",2
"lib1","SARS-CoV-2","TTGCTGAGAACCAAAT",3,27.23,6.14,-4.63,0.59,1.5,1.22,0.01,">1 nonsynonymous","K48I Q84P P149H",3
"lib1","SARS-CoV-2","TTGCTGAGTATGTAAG",4,95.5,10.03,-0.74,0.06,2.92,1.02,0,">1 nonsynonymous","K87I G174A",2
"lib1","SARS-CoV-2","TTGCTGCGGAAAACTA",6,0.13,NA,NA,NA,NA,NA,NA,"stop","N4T V11G A22* C61A Q84* S139R N157H Y175R",8
"lib1","SARS-CoV-2","TTGCTGGACGTCAATA",1,28.31,7.04,-3.72,0.18,1.5,1.07,0.01,">1 nonsynonymous","I28Y N40A G51T E154Y Y178S",5
"lib1","SARS-CoV-2","TTGCTGGCTCCGCGCT",5,97.54,10.17,-0.6,0.07,2.91,1,0,"1 nonsynonymous","G155F",1
"lib1","SARS-CoV-2","TTGCTGTACTACGGCG",2,0.26,NA,NA,NA,NA,NA,NA,"stop","F44Y C49N L57*",3
"lib1","SARS-CoV-2","TTGCTTAAAATTAGAT",3,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R V37Y P96T V103S D112H",5
"lib1","SARS-CoV-2","TTGCTTAACAATTAGA",1,5.71,9.16,-1.61,0.41,1.51,1.06,0.04,">1 nonsynonymous","E10H E135A S139H T201S",4
"lib1","SARS-CoV-2","TTGCTTAACACCAACT",4,30.38,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","Y21K V37L Y91F Y121Q",4
"lib1","SARS-CoV-2","TTGCTTATACTAGAAA",3,50.61,6,-4.76,1.18,1.5,1.19,0.02,">1 nonsynonymous","A14I L122V L162Y Y178M",4
"lib1","SARS-CoV-2","TTGCTTCAGAGTTTAG",2,22.43,10.52,-0.25,0.08,2.77,1.12,0,"1 nonsynonymous","V173G",1
"lib1","SARS-CoV-2","TTGCTTCATATTATTG",2,13.41,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L57S A81L",2
"lib1","SARS-CoV-2","TTGCTTCGAGATTATG",1,46.89,10.38,-0.38,0.04,3,1,0,"1 nonsynonymous","G155H",1
"lib1","SARS-CoV-2","TTGCTTCTAAGATAAT",1,18.76,10.7,-0.07,0.14,3,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTTCTTAGAGAAT",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120E P133A",2
"lib1","SARS-CoV-2","TTGCTTGAAATCTTAC",2,122.6,10.6,-0.16,0.11,2.71,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGCTTGAATTAAGAA",1,43.03,10.34,-0.43,0.08,2.8,1,0,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","TTGCTTGGCTAATTCC",3,1.84,NA,NA,NA,NA,NA,NA,"stop","P7* P96I W106V G116S",4
"lib1","SARS-CoV-2","TTGCTTGTAAAGTAAA",6,180.41,10.73,-0.04,0.05,2.94,1.03,0,"1 nonsynonymous","A145S",1
"lib1","SARS-CoV-2","TTGCTTGTACGTAGCA",7,127.61,10.14,-0.62,0.06,2.84,1.03,0,">1 nonsynonymous","F156M G196P",2
"lib1","SARS-CoV-2","TTGCTTTACACCTATT",2,27.06,6.1,-4.66,1.17,1.5,1.17,0.04,">1 nonsynonymous","C49T G116V S147L",3
"lib1","SARS-CoV-2","TTGCTTTTACGGTATG",4,57.66,9.99,-0.78,0.09,2.34,1.03,0,">1 nonsynonymous","L38M A105Y",2
"lib1","SARS-CoV-2","TTGGAAAAATTTCGGG",2,122.03,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37M G51S E135L Q176M",4
"lib1","SARS-CoV-2","TTGGAAAACGGATTGC",11,87.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F70N V77M A105H Y119L F156E",5
"lib1","SARS-CoV-2","TTGGAAAATTCCTCAA",5,41.1,8.35,-2.41,0.15,1.57,1.16,0.01,">1 nonsynonymous","R78E I104Q",2
"lib1","SARS-CoV-2","TTGGAAACAACACTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N120* N151I",2
"lib1","SARS-CoV-2","TTGGAAACCCTTTATA",6,45.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M G86C N92Q",3
"lib1","SARS-CoV-2","TTGGAAACTAGCTGCA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib1","SARS-CoV-2","TTGGAAAGATTTTACA",4,24.23,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","C49R L57K Y143P F167Y",4
"lib1","SARS-CoV-2","TTGGAAAGCGGAAACC",5,61.36,8.2,-2.57,0.25,1.62,1.15,0.02,"1 nonsynonymous","R179V",1
"lib1","SARS-CoV-2","TTGGAAAGCTTGAATT",1,22.55,6,-4.76,0.59,3,1.1,0,">1 nonsynonymous","G9E Y35R Y165T",3
"lib1","SARS-CoV-2","TTGGAAAGTTAAAATA",8,58.12,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","G101P P149Y",2
"lib1","SARS-CoV-2","TTGGAAATAGTGATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C31* R78H",2
"lib1","SARS-CoV-2","TTGGAACAAGACACAA",6,38.71,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","V103H V173I",2
"lib1","SARS-CoV-2","TTGGAACATCAACGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45* T55L D97S V103F K132F N157S",6
"lib1","SARS-CoV-2","TTGGAACATCCTGTTA",2,73.19,10.84,0.08,0.11,2.85,1.13,0,"1 nonsynonymous","L122S",1
"lib1","SARS-CoV-2","TTGGAACATTTTAATA",4,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E F185R",2
"lib1","SARS-CoV-2","TTGGAACCAAAGTTAA",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P F62M F156S",3
"lib1","SARS-CoV-2","TTGGAACCATTAATAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T3G V37* V103R",3
"lib1","SARS-CoV-2","TTGGAACCTCGTACAA",3,6.81,6.45,-4.31,1.6,1.92,1.15,0.01,">1 nonsynonymous","N4F Y93W L122F",3
"lib1","SARS-CoV-2","TTGGAACGGATTTAGG",3,39.7,6.21,-4.56,0.84,1.5,1.16,0.04,">1 nonsynonymous","F8C D98L Y175Q E186H",4
"lib1","SARS-CoV-2","TTGGAACTCTAGGCTC",3,120.58,9.08,-1.68,0.08,2.7,1.12,0,">1 nonsynonymous","S139A F160Y T170L",3
"lib1","SARS-CoV-2","TTGGAACTGAGTGCTT",8,55.33,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","T3R I28G P54R Y91E I138L",5
"lib1","SARS-CoV-2","TTGGAACTTATACCAC",5,16.71,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","N1W A14N Y35K F62L E76T",5
"lib1","SARS-CoV-2","TTGGAAGAACTGATCC",12,69.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162S",1
"lib1","SARS-CoV-2","TTGGAAGAGAAATGCT",12,209.75,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25L A81K E135V",3
"lib1","SARS-CoV-2","TTGGAAGCGAATGTTA",10,272.76,6.18,-4.59,0.71,1.5,1.19,0.02,">1 nonsynonymous","S113C Y159W V181I",3
"lib1","SARS-CoV-2","TTGGAAGCGTCCATAT",1,6.79,10.83,0.06,0.12,2.92,1.05,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGGAAGCTCTCCCGG",5,195.87,10.04,-0.72,0.07,2.19,1,0,"1 nonsynonymous","G51W",1
"lib1","SARS-CoV-2","TTGGAAGGTTCCCTGC",2,11.79,6,-4.76,2,1.5,1.38,0.03,">1 nonsynonymous","T15L R25D D34L N110L G152S",5
"lib1","SARS-CoV-2","TTGGAAGTCATACCAC",1,8.51,6.75,-4.01,0.42,1.5,1.1,0.05,">1 nonsynonymous","N4I V181S",2
"lib1","SARS-CoV-2","TTGGAAGTGAAAAAAA",1,11.98,10.57,-0.19,0.11,2.92,1,0.01,">1 nonsynonymous","S41T K56L Q168R",3
"lib1","SARS-CoV-2","TTGGAAGTTATCGAAC",3,27.94,10.25,-0.52,0.11,2.37,1,0.01,">1 nonsynonymous","F8M D97Y S164M",3
"lib1","SARS-CoV-2","TTGGAATAAAAAACAA",2,43.62,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F8R W23F A105V",3
"lib1","SARS-CoV-2","TTGGAATCTTCAAAAT",1,25.4,10.09,-0.68,0.09,2.59,1.08,0,">1 nonsynonymous","T15C T148R",2
"lib1","SARS-CoV-2","TTGGAATGCAAATGAA",3,53.57,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","G51D N92Q N120R",3
"lib1","SARS-CoV-2","TTGGAATGGCTGTTAA",1,5.57,10.26,-0.51,0.23,2.65,1.1,0.01,">1 nonsynonymous","N118A S139G",2
"lib1","SARS-CoV-2","TTGGAATGGGATGAAA",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y S53Y N107K L122M Y178S V180F",6
"lib1","SARS-CoV-2","TTGGAATTAAGACACG",3,29.75,6.07,-4.69,1.06,1.5,1.26,0.02,">1 nonsynonymous","F70T I88L",2
"lib1","SARS-CoV-2","TTGGACAAAAAGTTGT",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I A67S",2
"lib1","SARS-CoV-2","TTGGACAAAATTAATA",5,39.91,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F12M V32L V77R L131S",4
"lib1","SARS-CoV-2","TTGGACAAAGTAACTA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","I104F R127* F134T",3
"lib1","SARS-CoV-2","TTGGACAAGTGTGTTT",2,72.77,6,-4.76,2,2.82,1.2,0.01,">1 nonsynonymous","R27H R78P D97L F156R Y175L",5
"lib1","SARS-CoV-2","TTGGACAATATCAGAT",1,51.06,10.12,-0.65,0.04,2.9,1.03,0,">1 nonsynonymous","R78L F156W",2
"lib1","SARS-CoV-2","TTGGACAATCCATGTA",4,42.38,10.33,-0.44,0.13,2.42,1.09,0.01,">1 nonsynonymous","R27W Y35F Y66W R136V",4
"lib1","SARS-CoV-2","TTGGACACACAAATGT",5,98.39,10.19,-0.58,0.05,2.92,1,0,"1 nonsynonymous","G155L",1
"lib1","SARS-CoV-2","TTGGACACCACAAAGG",5,32.26,6.03,-4.74,0.89,1.5,1.17,0.02,">1 nonsynonymous","D34A Y66H G86C Y91P F99S L125Y P133A G174P",8
"lib1","SARS-CoV-2","TTGGACACGCATTAAG",4,68.08,10.72,-0.04,0.05,2.91,1.04,0,">1 nonsynonymous","A14M L122Q",2
"lib1","SARS-CoV-2","TTGGACAGCAAATCGT",8,105.79,10.15,-0.61,0.04,2.91,1.01,0,"1 nonsynonymous","V11Y",1
"lib1","SARS-CoV-2","TTGGACATAACTAAGG",3,181.65,10.49,-0.28,0.05,2.92,1.01,0,">1 nonsynonymous","S43V D90T",2
"lib1","SARS-CoV-2","TTGGACATATATTGGG",2,71.66,9.28,-1.49,0.11,2.51,1.12,0,">1 nonsynonymous","T55M T85I N118M",3
"lib1","SARS-CoV-2","TTGGACATTGTGTAAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","E135* G174Q",2
"lib1","SARS-CoV-2","TTGGACCAGATGATAA",1,18.3,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F70D L95I N120S Y143G",4
"lib1","SARS-CoV-2","TTGGACCAGATGATTT",4,89.61,10.65,-0.12,0.05,2.92,1.05,0,">1 nonsynonymous","C61L F160R A192V",3
"lib1","SARS-CoV-2","TTGGACCCATCGAAGG",3,27.33,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A89N C102R G155I P191G",4
"lib1","SARS-CoV-2","TTGGACCGATTTATCG",10,151.9,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R16C G86V",2
"lib1","SARS-CoV-2","TTGGACCTATTAAGGC",4,12.08,10.51,-0.25,0.14,2.94,1.12,0.01,">1 nonsynonymous","N4H Q84M",2
"lib1","SARS-CoV-2","TTGGACCTGATATACG",1,5.94,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49G K87S",2
"lib1","SARS-CoV-2","TTGGACGATACTATGG",1,8.66,8.8,-1.96,0.16,2.37,1.12,0.02,">1 nonsynonymous","L38P I138V S147T T170S",4
"lib1","SARS-CoV-2","TTGGACGCTCGTCAAA",9,81.74,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K87A A89E",2
"lib1","SARS-CoV-2","TTGGACGTATTAGTTT",2,9.16,6,-4.76,1.27,3,1.05,0,">1 nonsynonymous","L60R V180Q",2
"lib1","SARS-CoV-2","TTGGACGTTCAAACAA",2,95.75,10.06,-0.71,0.07,2.16,1.03,0,">1 nonsynonymous","Y91F Y178R",2
"lib1","SARS-CoV-2","TTGGACTAAACAATCC",2,21.41,6.06,-4.7,1.11,1.5,1.08,0.03,">1 nonsynonymous","F8K A14Y Y39L G74M V103P",5
"lib1","SARS-CoV-2","TTGGACTACTTATAGG",3,48.7,10.82,0.06,0.05,2.95,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGGACTCAATAAAGC",1,189.33,10.77,0,0.05,2.9,1.05,0,"1 nonsynonymous","P197Y",1
"lib1","SARS-CoV-2","TTGGACTCTACATACG",7,6.05,NA,NA,NA,NA,NA,NA,"stop","A105I G152*",2
"lib1","SARS-CoV-2","TTGGAGAAAGCTAATG",3,17.3,7.76,-3,0.48,1.87,1.38,0.07,">1 nonsynonymous","V103L F167P Q176L",3
"lib1","SARS-CoV-2","TTGGAGAAAGGTGCAA",6,43.72,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","G86H L131I G155L",3
"lib1","SARS-CoV-2","TTGGAGAAATGATATA",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K C49T C61S K94Y F99R N107T",6
"lib1","SARS-CoV-2","TTGGAGAATTCTTAAG",2,51.98,10.79,0.02,0.08,2.91,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGAGAGGGTCCGTA",1,10.83,10.58,-0.19,0.09,3,1.02,0,"1 nonsynonymous","N58S",1
"lib1","SARS-CoV-2","TTGGAGAGTCGCATCC",1,8.92,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","E10R D34A T63L P96T",4
"lib1","SARS-CoV-2","TTGGAGATCGATTTCG",16,274.73,9.94,-0.83,0.06,2.82,1.02,0,">1 nonsynonymous","S43V L95V T170M T201M",4
"lib1","SARS-CoV-2","TTGGAGCACAGTTAGC",6,15.35,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","V77E V103N Y119K",3
"lib1","SARS-CoV-2","TTGGAGCGTAACTGCT",2,14.53,10.72,-0.04,0.06,2.87,1.06,0,"1 nonsynonymous","T63Y",1
"lib1","SARS-CoV-2","TTGGAGCTTGGGCCAG",5,17.36,6,-4.76,2,1.5,1.14,0.02,">1 nonsynonymous","V77E F99Q I138C",3
"lib1","SARS-CoV-2","TTGGAGGCTGCGCGAC",1,33.27,10.43,-0.34,0.09,2.84,1.04,0,">1 nonsynonymous","I2D G116Q S184F",3
"lib1","SARS-CoV-2","TTGGAGGTATATATGT",2,69.48,10.78,0.02,0.05,2.92,1.03,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TTGGAGTACTTTCTAT",5,66.35,8.64,-2.12,0.17,1.68,1.2,0.01,">1 nonsynonymous","C6Y F17P N24R",3
"lib1","SARS-CoV-2","TTGGAGTAGAGGATCC",7,83.24,9.46,-1.31,0.1,2.49,1.11,0,">1 nonsynonymous","A81T I138T A145I",3
"lib1","SARS-CoV-2","TTGGAGTCCACGAATT",1,17.93,NA,NA,NA,NA,NA,NA,"stop","Y91S S164V T201*",3
"lib1","SARS-CoV-2","TTGGAGTTACCGTTAC",4,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F F99L Y119E P169N",4
"lib1","SARS-CoV-2","TTGGAGTTCTAACTCA",3,67.72,10.67,-0.09,0.09,2.85,1.08,0,">1 nonsynonymous","T85M D98S H189D",3
"lib1","SARS-CoV-2","TTGGATAAGGTATAAA",4,20.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K128D L183D",2
"lib1","SARS-CoV-2","TTGGATAAGGTTAAAG",2,51.99,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P7V D68M G83M",3
"lib1","SARS-CoV-2","TTGGATACAACCGGAT",9,60.6,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","L38V T55A P82K S139C G174R",5
"lib1","SARS-CoV-2","TTGGATACGTGCCAGC",8,197.34,10.77,0.01,0.06,2.86,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGATAGCTAGGTTT",5,25.26,6.64,-4.13,0.22,1.5,1.08,0.01,">1 nonsynonymous","T3L W23E P82Y N107I G146Q",5
"lib1","SARS-CoV-2","TTGGATAGTACCGGTT",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105M G116S Y143H E186G",4
"lib1","SARS-CoV-2","TTGGATATGGTATGAA",7,68.62,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I2M S19E F44Y F62L R78G K128W L162R Q168M T201C",9
"lib1","SARS-CoV-2","TTGGATCAAAATGTTA",2,44.22,10.89,0.13,0.09,2.92,1.05,0,"1 nonsynonymous","V37W",1
"lib1","SARS-CoV-2","TTGGATCAGACTTACA",1,0.86,NA,NA,NA,NA,NA,NA,"stop","F8L L95H G146*",3
"lib1","SARS-CoV-2","TTGGATCATACTCGAA",5,60.98,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","N92H",1
"lib1","SARS-CoV-2","TTGGATCCAGCTCACA",2,73.34,10.76,-0.01,0.1,2.87,1.02,0,"1 nonsynonymous","G196P",1
"lib1","SARS-CoV-2","TTGGATCGAACGGGTT",2,18.55,6,-4.76,1.66,3,1.14,0,">1 nonsynonymous","F62N Y91G Y119R N157Y F185C",5
"lib1","SARS-CoV-2","TTGGATCGCCCGAATT",3,0,NA,NA,NA,NA,NA,NA,"stop","F12* G51D G86N",3
"lib1","SARS-CoV-2","TTGGATCTGAGTCAAC",8,113.78,10.59,-0.17,0.03,2.91,1.06,0,">1 nonsynonymous","S147A V173C",2
"lib1","SARS-CoV-2","TTGGATCTTGATGACA",7,0.36,NA,NA,NA,NA,NA,NA,"stop","A42G D98L Y119L C158S G174*",5
"lib1","SARS-CoV-2","TTGGATGACAACAACA",1,30.12,9.67,-1.09,0.11,2.9,1,0.01,">1 nonsynonymous","Y91L N118A H189T",3
"lib1","SARS-CoV-2","TTGGATGACCCCAGAA",6,72.51,10.86,0.1,0.09,2.87,1.09,0,">1 nonsynonymous","V37T L122S",2
"lib1","SARS-CoV-2","TTGGATGCTAGGTCAA",7,0.19,NA,NA,NA,NA,NA,NA,"stop","L95* S113L G146S N151K C158Y",5
"lib1","SARS-CoV-2","TTGGATGTACATCTAA",1,20.62,6,-4.76,2,1.5,1.14,0.04,">1 nonsynonymous","D90I R136S R179S",3
"lib1","SARS-CoV-2","TTGGATGTATATGGCT",1,22.64,10.43,-0.34,0.11,2.88,1,0,"1 nonsynonymous","A14G",1
"lib1","SARS-CoV-2","TTGGATGTGCCGGAGC",2,42.5,8.73,-2.03,0.15,2.09,1.18,0.01,">1 nonsynonymous","V32N K56A D98V E154F",4
"lib1","SARS-CoV-2","TTGGATGTTCAAAGTG",5,13.74,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15Y F99C",2
"lib1","SARS-CoV-2","TTGGATTAAATATAAG",2,16.72,10.29,-0.48,0.14,2.89,1.11,0.01,"1 nonsynonymous","P96G",1
"lib1","SARS-CoV-2","TTGGATTAACTAATGA",4,19.51,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","C6P L95P W106I G172I",4
"lib1","SARS-CoV-2","TTGGATTACTACAGCG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","L122* L125Q",2
"lib1","SARS-CoV-2","TTGGATTACTGATGGG",16,48.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6F V52A F99L A105N V173L",5
"lib1","SARS-CoV-2","TTGGATTGGCTGGACA",2,35.44,10.68,-0.09,0.08,2.88,1.08,0,"1 nonsynonymous","K132Q",1
"lib1","SARS-CoV-2","TTGGATTTAGACATTG",4,21.7,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T15P R73F T140M K199S",4
"lib1","SARS-CoV-2","TTGGATTTTGTGACTC",4,25.13,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","S36C C150G S164K",3
"lib1","SARS-CoV-2","TTGGATTTTTTTATGG",3,11.12,9.88,-0.88,0.21,2.08,1.09,0.03,">1 nonsynonymous","G9L F47R",2
"lib1","SARS-CoV-2","TTGGCAAATGAGGGAA",7,56.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S N107G S139R V173G",4
"lib1","SARS-CoV-2","TTGGCAAATTGTACAT",3,11.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2A V32G G83V T100S Y159T",5
"lib1","SARS-CoV-2","TTGGCAACTGCTAAAC",5,115.19,10.7,-0.07,0.09,2.86,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGCAATCATGATAT",9,132.54,10.77,0.01,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGCACACGTGGCCA",3,56.28,8.25,-2.51,0.13,2.54,1.13,0.01,">1 nonsynonymous","S29E Y159N",2
"lib1","SARS-CoV-2","TTGGCACCGGCAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I D34I N58A",3
"lib1","SARS-CoV-2","TTGGCACTCTAACTAG",6,79.07,10.01,-0.76,0.04,2.81,1.06,0,">1 nonsynonymous","D97N G174W K198Y",3
"lib1","SARS-CoV-2","TTGGCACTGAATCAGA",6,44.7,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","G83L Y91P R136V",3
"lib1","SARS-CoV-2","TTGGCACTTCCTTTCA",5,39.5,6,-4.76,2,3,1.2,0,">1 nonsynonymous","F17K A33H N40K F47Y",4
"lib1","SARS-CoV-2","TTGGCAGAGGATAAAA",5,42.18,6.44,-4.33,0.5,1.5,1.1,0.02,">1 nonsynonymous","N58Q G101S S129H",3
"lib1","SARS-CoV-2","TTGGCAGCTTAGTTTT",4,12.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10I R16Y Q176R",3
"lib1","SARS-CoV-2","TTGGCAGCTTATACAG",4,56.59,10.68,-0.09,0.09,2.86,1.07,0,"1 nonsynonymous","D97L",1
"lib1","SARS-CoV-2","TTGGCAGTCTCTTGAA",6,136.92,10.66,-0.1,0.03,2.95,1.01,0,">1 nonsynonymous","G9L R16T",2
"lib1","SARS-CoV-2","TTGGCAGTGACTGAAA",8,3.51,NA,NA,NA,NA,NA,NA,"stop","G9L Y91* I138N F160Q",4
"lib1","SARS-CoV-2","TTGGCATGAACCGTCA",1,30.17,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G9K R16E S36E G101T N120R L183S",6
"lib1","SARS-CoV-2","TTGGCATGCCAAGGTG",2,12.63,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F70K S129Y P197A",3
"lib1","SARS-CoV-2","TTGGCCAATTGGACGA",2,21.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A105L T170M",2
"lib1","SARS-CoV-2","TTGGCCACACGGTCAA",2,54.38,9.78,-0.98,0.12,2.19,1.05,0,">1 nonsynonymous","L60T Y178I",2
"lib1","SARS-CoV-2","TTGGCCAGGAACCGGG",2,18.91,8.55,-2.22,0.19,1.55,1.26,0.03,">1 nonsynonymous","I2E F12Y I104G",3
"lib1","SARS-CoV-2","TTGGCCATCATCGAAC",8,109.95,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","N40P T46R D68Q S129Y",4
"lib1","SARS-CoV-2","TTGGCCCCATCCATTA",2,5.54,10.05,-0.71,0.14,2.14,1,0.01,">1 nonsynonymous","V11N S41H N151L",3
"lib1","SARS-CoV-2","TTGGCCTCGATCAACA",3,51.11,8.46,-2.31,0.14,2.22,1.08,0.01,">1 nonsynonymous","Y91V Y119V H189S",3
"lib1","SARS-CoV-2","TTGGCCTGTTGGTTTG",6,30.65,8.68,-2.09,0.25,1.5,1,0.05,">1 nonsynonymous","A105D S200N",2
"lib1","SARS-CoV-2","TTGGCGAAAACGCATG",1,20.29,10.75,-0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGCGAACCTTCATA",1,47.09,10.25,-0.52,0.05,2.99,1,0,">1 nonsynonymous","I2D N40Q K56D Q84K F156A",5
"lib1","SARS-CoV-2","TTGGCGAAGTGACAAG",5,80.5,10.76,0,0.07,2.88,1.07,0,"1 nonsynonymous","K198E",1
"lib1","SARS-CoV-2","TTGGCGATTAGTAAAT",10,102.77,10.77,0.01,0.04,2.93,1.04,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","TTGGCGCTACGCTGAA",7,184.97,10.68,-0.09,0.04,2.93,1.01,0,">1 nonsynonymous","I2T D90N K114M",3
"lib1","SARS-CoV-2","TTGGCGGAGATTATCA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","F44C S53* G146S",3
"lib1","SARS-CoV-2","TTGGCGGCCCCACTAA",4,46.5,10.78,0.01,0.05,2.97,1,0,"1 nonsynonymous","A190T",1
"lib1","SARS-CoV-2","TTGGCTATGGTTAAAC",3,99.66,10.25,-0.52,0.06,2.77,1.05,0,">1 nonsynonymous","S36M L122V K128M L188W",4
"lib1","SARS-CoV-2","TTGGCTATTAATAGTT",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45W F62V V77T",3
"lib1","SARS-CoV-2","TTGGCTCCAATGACCT",1,20.51,6.12,-4.64,0.76,1.5,1.11,0.02,">1 nonsynonymous","C6F I142R C150M C158P",4
"lib1","SARS-CoV-2","TTGGCTCCCGTGATAA",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A I142S",2
"lib1","SARS-CoV-2","TTGGCTCCTGACGTGA",3,39.21,8.84,-1.93,0.17,1.78,1.16,0.02,"1 nonsynonymous","F12N",1
"lib1","SARS-CoV-2","TTGGCTCGACACCAGG",5,25.36,10.66,-0.1,0.13,2.65,1.13,0.01,"1 nonsynonymous","P197H",1
"lib1","SARS-CoV-2","TTGGCTCTACATCTAC",1,54.44,10.7,-0.07,0.05,2.88,1.06,0,">1 nonsynonymous","L5S C61V",2
"lib1","SARS-CoV-2","TTGGCTGATTCAACTG",1,13.21,8.75,-2.02,0.12,2.68,1.12,0.01,">1 nonsynonymous","Y119M G152C",2
"lib1","SARS-CoV-2","TTGGCTGTAACCATCC",1,6,6,-4.76,2,1.5,1.1,0.06,">1 nonsynonymous","V103L S139Y",2
"lib1","SARS-CoV-2","TTGGCTTAACTAGCGA",1,39.61,9.87,-0.9,0.15,1.71,1.08,0.01,">1 nonsynonymous","S41P S53F L122C S139R",4
"lib1","SARS-CoV-2","TTGGCTTACAAACGCG",1,10.91,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","L60A N92L G101Y",3
"lib1","SARS-CoV-2","TTGGCTTGTGATCATA",2,17.08,7.86,-2.91,0.27,1.8,1.17,0.02,"1 nonsynonymous","S19W",1
"lib1","SARS-CoV-2","TTGGGAAAAACCTTGG",4,89.38,10.63,-0.13,0.05,2.87,1.07,0,"1 nonsynonymous","N64L",1
"lib1","SARS-CoV-2","TTGGGAACAAAATGAA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","C49M Y143* Q176S",3
"lib1","SARS-CoV-2","TTGGGAACAACGCTAA",2,14.59,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C6I R25K A105K L122V D137W",5
"lib1","SARS-CoV-2","TTGGGAACACAAGACC",3,7.72,6,-4.76,2,1.5,1.2,0.07,">1 nonsynonymous","N13S G86M L95V K114W S139G",5
"lib1","SARS-CoV-2","TTGGGAACCAAGAGAA",5,140.03,10.73,-0.04,0.08,2.84,1.1,0,">1 nonsynonymous","G9D T201K",2
"lib1","SARS-CoV-2","TTGGGAAGCGATTATG",2,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I K48D T85Q D137V Y165T",5
"lib1","SARS-CoV-2","TTGGGAAGTCAATGAT",2,29.32,10.67,-0.1,0.08,2.82,1.11,0,">1 nonsynonymous","L60S T201C",2
"lib1","SARS-CoV-2","TTGGGAATATACTTAC",3,19.74,10.15,-0.62,0.26,2.22,1,0.04,">1 nonsynonymous","D90I F160G",2
"lib1","SARS-CoV-2","TTGGGAATGCGAATAG",3,0,NA,NA,NA,NA,NA,NA,"stop","D90R Y121* F160P",3
"lib1","SARS-CoV-2","TTGGGACAAAAATAAT",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G C61D R124P",3
"lib1","SARS-CoV-2","TTGGGACACATATAAG",1,15.73,10.13,-0.63,0.24,2.19,1.09,0.01,"1 nonsynonymous","A81F",1
"lib1","SARS-CoV-2","TTGGGACAGACATTAT",1,9.27,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1E F99G G146D E154S",4
"lib1","SARS-CoV-2","TTGGGACCATTCTTTA",1,28.85,10.77,0.01,0.07,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGGACCGTATGAAT",3,75.52,10.43,-0.34,0.06,2.88,1.02,0,"1 nonsynonymous","K56W",1
"lib1","SARS-CoV-2","TTGGGACTACTGATAG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","E10A N58V T85* A89H",4
"lib1","SARS-CoV-2","TTGGGACTCACACACC",3,62.87,9.33,-1.44,0.16,1.81,1.1,0.01,">1 nonsynonymous","F12W D59P",2
"lib1","SARS-CoV-2","TTGGGCACTCTCGATG",3,17.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G L38P Y66N P82E D137E",5
"lib1","SARS-CoV-2","TTGGGCAGCACAATAC",1,9.66,10.51,-0.25,0.17,2.9,1.11,0.01,">1 nonsynonymous","I28L A81S",2
"lib1","SARS-CoV-2","TTGGGCATTTAACTAC",2,28.96,10.8,0.03,0.08,2.81,1.12,0,"1 nonsynonymous","N58A",1
"lib1","SARS-CoV-2","TTGGGCCCGACCTCGA",2,35.82,10.35,-0.42,0.09,2.76,1.03,0,">1 nonsynonymous","P82I L122R",2
"lib1","SARS-CoV-2","TTGGGCCTCGTCTAAT",11,192.28,9.71,-1.05,0.1,1.91,1.07,0,">1 nonsynonymous","S69D T201G",2
"lib1","SARS-CoV-2","TTGGGCCTTGGCACTA",2,12.14,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","P7V S43R F99V",3
"lib1","SARS-CoV-2","TTGGGCGATACCCTTA",6,1.67,NA,NA,NA,NA,NA,NA,"stop","F62R I80M A89G V103* R124Y T148P L162M",7
"lib1","SARS-CoV-2","TTGGGCGTACTATCGT",2,12.45,7.24,-3.53,0.44,1.5,1.08,0.04,">1 nonsynonymous","G86Q S113I R124A F167Y",4
"lib1","SARS-CoV-2","TTGGGCTAGATCAAAA",4,0.9,NA,NA,NA,NA,NA,NA,"stop","N13L P82* W106C C150S Y165L",5
"lib1","SARS-CoV-2","TTGGGGAGAAGAAGAC",2,19.45,6.24,-4.53,0.33,1.73,1.09,0,">1 nonsynonymous","L5K F167G",2
"lib1","SARS-CoV-2","TTGGGGCACTCCTCGA",1,11.87,6,-4.76,2,1.5,1.09,0.02,">1 nonsynonymous","T63F N92K",2
"lib1","SARS-CoV-2","TTGGGGCATATATAGG",2,57.58,10.4,-0.36,0.06,2.88,1.01,0,">1 nonsynonymous","S129C P149S Q163G G174A K198V",5
"lib1","SARS-CoV-2","TTGGGGCGAAGATTAT",1,16.47,9.39,-1.38,0.17,1.72,1.07,0.01,"1 nonsynonymous","F17K",1
"lib1","SARS-CoV-2","TTGGGGCGCACACAAT",3,43.43,10.59,-0.18,0.06,2.92,1,0,"1 nonsynonymous","Q84H",1
"lib1","SARS-CoV-2","TTGGGGTCATAATTTG",10,99.27,7.25,-3.51,0.26,1.5,1.09,0.02,">1 nonsynonymous","N64L A89Q E154D",3
"lib1","SARS-CoV-2","TTGGGTAAACAACTGC",4,44.83,6.97,-3.79,0.34,1.5,1.11,0.03,">1 nonsynonymous","S41L Y121G",2
"lib1","SARS-CoV-2","TTGGGTAAAGACGGGG",2,10.31,6,-4.76,1.53,3,1.09,0.01,">1 nonsynonymous","F12T I28M Y143T",3
"lib1","SARS-CoV-2","TTGGGTACAAGAACGC",6,63.14,8.29,-2.48,0.25,1.5,1.19,0.02,">1 nonsynonymous","Q79R E141S T148P",3
"lib1","SARS-CoV-2","TTGGGTACACGCGACG",3,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V P82D F126A T170M",4
"lib1","SARS-CoV-2","TTGGGTCGATTCAAGG",2,28.11,10.51,-0.25,0.08,2.88,1.04,0,"1 nonsynonymous","G116L",1
"lib1","SARS-CoV-2","TTGGGTGACACGACAC",3,0.88,NA,NA,NA,NA,NA,NA,"stop","S45L I72* G83D L162I V173* A190V",6
"lib1","SARS-CoV-2","TTGGGTGCAAATGTGT",1,38.46,9.84,-0.93,0.12,1.72,1.08,0.01,">1 nonsynonymous","F62Q D90G",2
"lib1","SARS-CoV-2","TTGGGTGCTATCGATT",4,58.3,10.76,0,0.06,2.9,1.04,0,"1 nonsynonymous","P149R",1
"lib1","SARS-CoV-2","TTGGGTTAATGCGCAA",4,107.29,10.83,0.06,0.06,2.92,1.03,0,"1 nonsynonymous","I2D",1
"lib1","SARS-CoV-2","TTGGGTTACCGCTCTA",8,76.96,7.69,-3.08,0.31,1.5,1.08,0.03,">1 nonsynonymous","P7S S45F D97I Y119A T140L",5
"lib1","SARS-CoV-2","TTGGTAAAAATGTACA",2,12.72,10.78,0.02,0.05,3,1.01,0,"1 nonsynonymous","C61A",1
"lib1","SARS-CoV-2","TTGGTAAACCACCATG",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E Y50C T201E",3
"lib1","SARS-CoV-2","TTGGTAAACCCCGCCT",3,19.14,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","P54C D90I P96A P133N",4
"lib1","SARS-CoV-2","TTGGTAAATATCAGCT",3,82.13,10.4,-0.37,0.06,2.88,1.04,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","TTGGTAACAAAACCTC",2,17.66,6,-4.76,2,1.5,1.33,0.05,">1 nonsynonymous","F12I F62G N92F N120W L188V",5
"lib1","SARS-CoV-2","TTGGTAACTAGGGAAG",2,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S N151L L183P",3
"lib1","SARS-CoV-2","TTGGTAACTTCCAGTA",4,12.22,7.24,-3.53,0.27,1.5,1.15,0.03,">1 nonsynonymous","A105K K128I S139R Y165S S200L",5
"lib1","SARS-CoV-2","TTGGTAATCCTGGAAT",1,36.02,10.28,-0.49,0.12,2.77,1,0,">1 nonsynonymous","A18M Q144M K198N",3
"lib1","SARS-CoV-2","TTGGTAATCGACCGAG",10,134.76,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","S19H R27N C61M I88R G174T",5
"lib1","SARS-CoV-2","TTGGTAATTCAATTCT",10,74.95,9.62,-1.14,0.14,1.96,1.11,0.01,">1 nonsynonymous","S41K L57S F160G T201Y",4
"lib1","SARS-CoV-2","TTGGTACAAAATTGAT",3,60.67,9.41,-1.35,0.1,2.66,1.16,0,"1 nonsynonymous","Y119M",1
"lib1","SARS-CoV-2","TTGGTACAGAACTCCC",3,60.17,9.48,-1.28,0.19,1.71,1.13,0.01,"1 nonsynonymous","D68M",1
"lib1","SARS-CoV-2","TTGGTACAGCTAACTA",6,24.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33D Y93R",2
"lib1","SARS-CoV-2","TTGGTACATATAAGCA",2,25.4,9.09,-1.67,0.12,2.85,1.12,0.01,">1 nonsynonymous","N64I T170L",2
"lib1","SARS-CoV-2","TTGGTACGAGGGACGC",2,17.42,10.6,-0.17,0.12,2.73,1.19,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTGGTACGCCCCGAAC",1,6.59,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I2T L60N Y165E K198R",4
"lib1","SARS-CoV-2","TTGGTACGTATGAGTA",3,29.24,8.47,-2.29,0.14,1.5,1.09,0.01,">1 nonsynonymous","D75L Y121T",2
"lib1","SARS-CoV-2","TTGGTATAAAATTCTA",9,2.8,NA,NA,NA,NA,NA,NA,"stop","N4V K94M I142* G174R",4
"lib1","SARS-CoV-2","TTGGTATTAAAGAATA",6,0.27,NA,NA,NA,NA,NA,NA,"stop","E10* A81* G86S D97I",4
"lib1","SARS-CoV-2","TTGGTCAACGTACGTC",6,107.23,10.77,0.01,0.07,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGTCACAGCGAGGA",22,562.4,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","F8W K56Y P161L",3
"lib1","SARS-CoV-2","TTGGTCACCCCATCGG",4,15.33,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16I L95Y",2
"lib1","SARS-CoV-2","TTGGTCACCTAATTGG",1,22.74,6.68,-4.08,0.46,1.5,1.16,0.03,">1 nonsynonymous","A33R S45H R78Q Y123S G155L",5
"lib1","SARS-CoV-2","TTGGTCACGGCCGAGA",1,156.47,9.78,-0.99,0.05,2.84,1.04,0,">1 nonsynonymous","A14S K87G G152D",3
"lib1","SARS-CoV-2","TTGGTCACTATCCTGG",9,166.81,8.59,-2.18,0.1,2.73,1.07,0,">1 nonsynonymous","D90S P149W N157D",3
"lib1","SARS-CoV-2","TTGGTCAGTAGTGTGG",6,88.72,6.67,-4.1,0.47,1.5,1.16,0.03,">1 nonsynonymous","N110V F167H",2
"lib1","SARS-CoV-2","TTGGTCCAAAGTACCC",8,28.61,6.34,-4.42,0.49,1.5,1.12,0.02,">1 nonsynonymous","I2D W23L Y93K",3
"lib1","SARS-CoV-2","TTGGTCCTGCGTATAG",7,89.43,10.23,-0.54,0.05,2.93,1,0,">1 nonsynonymous","T3G A145I",2
"lib1","SARS-CoV-2","TTGGTCGACTCTAAAT",1,15.24,11.04,0.27,0.1,2.92,1.05,0.01,"1 nonsynonymous","N120Q",1
"lib1","SARS-CoV-2","TTGGTCGCATATAAAC",1,7.15,8.73,-2.04,0.21,2.55,1.09,0.02,">1 nonsynonymous","T3V S36R A42R Y119H Q144Y",5
"lib1","SARS-CoV-2","TTGGTCTAGTTATACA",6,117.34,10.61,-0.15,0.03,2.91,1.05,0,"1 nonsynonymous","G9R",1
"lib1","SARS-CoV-2","TTGGTCTCAACAAACT",3,36.63,6,-4.76,1.68,1.5,1.12,0.03,">1 nonsynonymous","N58F W106T C150G K198R",4
"lib1","SARS-CoV-2","TTGGTCTCCCAAAGGT",7,92.37,9.61,-1.15,0.18,1.81,1.15,0.01,"1 nonsynonymous","R136P",1
"lib1","SARS-CoV-2","TTGGTGAACAAATCAC",8,109.03,8.22,-2.54,0.26,1.5,1.15,0.02,">1 nonsynonymous","D97L D137G",2
"lib1","SARS-CoV-2","TTGGTGAACTTCAGCA",4,0.36,NA,NA,NA,NA,NA,NA,"stop","C31M N157S Q168*",3
"lib1","SARS-CoV-2","TTGGTGAAGGACATTA",2,24.19,7.27,-3.49,0.33,1.5,1.13,0.05,">1 nonsynonymous","I88V T100N F185S",3
"lib1","SARS-CoV-2","TTGGTGACTTCCGGTT",1,1.04,NA,NA,NA,NA,NA,NA,"stop","I2Y R16N A42G T85* T201D",5
"lib1","SARS-CoV-2","TTGGTGATTAGAAATG",17,99.1,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","W106F V115L C150K E154F G155C V173F",6
"lib1","SARS-CoV-2","TTGGTGGACTATAAAT",1,19.16,7.62,-3.14,0.25,1.75,1.04,0.02,">1 nonsynonymous","A14L I142D T201H",3
"lib1","SARS-CoV-2","TTGGTGGATACCTTGT",1,19.85,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","W23M D90T N107G",3
"lib1","SARS-CoV-2","TTGGTGGCAAATAGGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K L60A W106L S113R Y119F Y143S T148L",7
"lib1","SARS-CoV-2","TTGGTGGCATTGTGCG",4,0,NA,NA,NA,NA,NA,NA,"stop","S36G F126*",2
"lib1","SARS-CoV-2","TTGGTGGCGGGACAAT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","C61G G155*",2
"lib1","SARS-CoV-2","TTGGTGGGCTGATCTG",3,10.89,10.45,-0.31,0.14,2.84,1.05,0.01,">1 nonsynonymous","A22G T100R T201N",3
"lib1","SARS-CoV-2","TTGGTTAAAATAGCAA",4,70.48,10.52,-0.24,0.05,2.91,1,0,"1 nonsynonymous","Y121M",1
"lib1","SARS-CoV-2","TTGGTTAAGACCTCGA",3,104.46,9.88,-0.89,0.09,2.31,1.09,0,">1 nonsynonymous","N64K E135F",2
"lib1","SARS-CoV-2","TTGGTTAGCTTCGAAA",3,43.77,10.72,-0.04,0.09,2.83,1.1,0,"1 nonsynonymous","G9H",1
"lib1","SARS-CoV-2","TTGGTTATCTAAGTCC",4,29.17,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","N58Y I142F F167D G174Q",4
"lib1","SARS-CoV-2","TTGGTTATCTACAGGC",2,30.42,6,-4.76,1.55,2.02,1.16,0.01,">1 nonsynonymous","A89L P177V",2
"lib1","SARS-CoV-2","TTGGTTATTACAACAT",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P W23T S36E",3
"lib1","SARS-CoV-2","TTGGTTCAGAAAAAAA",3,48.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V V37I S113F",3
"lib1","SARS-CoV-2","TTGGTTCCAAACAAAT",5,49.81,10.59,-0.18,0.08,2.8,1.16,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGGTTCCGCCAAGAG",6,33.75,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","A14K N58L C150H G174F",4
"lib1","SARS-CoV-2","TTGGTTCCGCCACACA",2,41.37,10.04,-0.73,0.13,2.64,1,0.01,">1 nonsynonymous","A22C F44S",2
"lib1","SARS-CoV-2","TTGGTTCGCGCCAAGA",5,0,NA,NA,NA,NA,NA,NA,"stop","L5* F12A F44Y G146A",4
"lib1","SARS-CoV-2","TTGGTTCGCTGCTTGG",4,65.07,9.92,-0.84,0.1,2.12,1.05,0,"1 nonsynonymous","F12A",1
"lib1","SARS-CoV-2","TTGGTTCGGATATGAC",1,38.25,10.61,-0.16,0.09,2.85,1.1,0,">1 nonsynonymous","S45D S200N",2
"lib1","SARS-CoV-2","TTGGTTCGTGTTGTCT",2,23.82,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","S19K D34R N120G G146C",4
"lib1","SARS-CoV-2","TTGGTTGAACCCACAA",5,41.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49L V77K",2
"lib1","SARS-CoV-2","TTGGTTGCAGGTGTAC",3,42.66,9.47,-1.29,0.16,1.92,1.1,0.01,">1 nonsynonymous","A14D P133D G146S H189N T201V",5
"lib1","SARS-CoV-2","TTGGTTGCAGTACACG",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55F C61L A89V T100S P133L",5
"lib1","SARS-CoV-2","TTGGTTGTAGAATACT",3,20.18,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C6A S36F T46V V103R Y121H L131W S164P T193A",8
"lib1","SARS-CoV-2","TTGGTTTAATTATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A67C D112E C150R Q168*",4
"lib1","SARS-CoV-2","TTGGTTTACTGTCTAT",1,1.13,NA,NA,NA,NA,NA,NA,"stop","L60C Q144*",2
"lib1","SARS-CoV-2","TTGGTTTATACTATGC",6,118.67,10.1,-0.66,0.05,2.59,1.05,0,"1 nonsynonymous","V173S",1
"lib1","SARS-CoV-2","TTGGTTTATTCAGACC",3,17.64,10.07,-0.7,0.14,2.16,1.08,0.01,">1 nonsynonymous","A33S V71I D98R",3
"lib1","SARS-CoV-2","TTGTAAAAACATACGT",2,22.61,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","Y35T C49L L95V D112L S139L",5
"lib1","SARS-CoV-2","TTGTAAAACTCACCCC",2,28.18,10.64,-0.12,0.1,2.87,1.07,0,"1 nonsynonymous","L188R",1
"lib1","SARS-CoV-2","TTGTAAAACTGAGGTG",5,78.75,10.27,-0.5,0.07,2.88,1.04,0,">1 nonsynonymous","T55N F62R",2
"lib1","SARS-CoV-2","TTGTAAAAGAATGCAT",2,42,8.35,-2.41,0.15,2.01,1.11,0.01,">1 nonsynonymous","A14W T55L F156Q",3
"lib1","SARS-CoV-2","TTGTAAAAGCCCGCCA",3,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C W106L E135L",3
"lib1","SARS-CoV-2","TTGTAAAAGCTGAGAA",1,33.68,6,-4.76,2,3,1.09,0,">1 nonsynonymous","F167R G174K",2
"lib1","SARS-CoV-2","TTGTAAAATAGGTACG",6,24.04,7.04,-3.73,0.34,1.5,1.11,0.03,">1 nonsynonymous","G9Y F47I S53C Y66T I104S I142T",6
"lib1","SARS-CoV-2","TTGTAAACAAGCGGAT",1,18.14,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","F62G G86W A105G S129L C158T",5
"lib1","SARS-CoV-2","TTGTAAACAGAGAGGT",1,13.18,6.3,-4.46,0.49,1.5,1.15,0.03,">1 nonsynonymous","G51A C61W A105G",3
"lib1","SARS-CoV-2","TTGTAAAGAAAAATAA",6,48.18,6,-4.76,1.78,3,1.17,0,">1 nonsynonymous","Y39V N92P W106R R136A",4
"lib1","SARS-CoV-2","TTGTAAAGATAAAAAG",5,141.77,10.75,-0.02,0.05,2.91,1.05,0,"1 nonsynonymous","N171I",1
"lib1","SARS-CoV-2","TTGTAAAGCCACCCAC",2,61.71,10.41,-0.36,0.06,2.9,1.01,0,">1 nonsynonymous","R27P Y35I N151T",3
"lib1","SARS-CoV-2","TTGTAAAGCCGCTAAG",6,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R N64R G166P F185S",4
"lib1","SARS-CoV-2","TTGTAAATAAAGTACC",4,16.34,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V52D D68Q Q163R",3
"lib1","SARS-CoV-2","TTGTAAATAACAATTT",9,177.41,9.63,-1.14,0.1,1.9,1.09,0,">1 nonsynonymous","S69L D90N",2
"lib1","SARS-CoV-2","TTGTAAATAAGAGATT",1,9.89,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","L57P L162E P197A",3
"lib1","SARS-CoV-2","TTGTAAATATACACTT",5,113.78,10.78,0.02,0.08,2.92,1.05,0,"1 nonsynonymous","T201N",1
"lib1","SARS-CoV-2","TTGTAAATATCAATCA",5,102.82,10.51,-0.25,0.06,2.96,1.02,0,">1 nonsynonymous","R27K F44I A192E K199L",4
"lib1","SARS-CoV-2","TTGTAAATCAGGACTA",3,44.15,10.31,-0.46,0.06,2.79,1.09,0,">1 nonsynonymous","T63P P149R",2
"lib1","SARS-CoV-2","TTGTAAATGATGGAGC",1,46.09,10.6,-0.17,0.23,2.19,1.03,0.02,">1 nonsynonymous","F12L Y35I S45Q",3
"lib1","SARS-CoV-2","TTGTAAATTATCTAAA",1,25.25,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","C49N L60W L122T",3
"lib1","SARS-CoV-2","TTGTAACAATATTAGA",2,17.71,9.97,-0.8,0.07,2.7,1.03,0,">1 nonsynonymous","S36N Y91V",2
"lib1","SARS-CoV-2","TTGTAACAGATTGTCA",10,91.21,6.01,-4.76,1.07,1.5,1.15,0.02,"1 nonsynonymous","I72F",1
"lib1","SARS-CoV-2","TTGTAACCATCACTGT",1,35.2,10.6,-0.16,0.05,2.9,1.05,0,">1 nonsynonymous","G9F L122F",2
"lib1","SARS-CoV-2","TTGTAACCGAGGATCA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","V11L S45D K48M T55V P82*",5
"lib1","SARS-CoV-2","TTGTAACGGCCGAAGC",7,187.59,10.47,-0.29,0.05,2.79,1.02,0,"1 nonsynonymous","A18M",1
"lib1","SARS-CoV-2","TTGTAACGGGGCGTAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","S36L S45M S53M S147D G174*",5
"lib1","SARS-CoV-2","TTGTAACGTAGGAACC",5,27.39,10.71,-0.06,0.09,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTAACTAACGTATA",5,52.58,9.79,-0.98,0.09,2.2,1.04,0,">1 nonsynonymous","C6A K128L",2
"lib1","SARS-CoV-2","TTGTAACTAGGGACTA",4,139.59,9.17,-1.59,0.08,2.74,1.11,0,">1 nonsynonymous","F62P Q168C",2
"lib1","SARS-CoV-2","TTGTAAGACCCCGGTC",1,30.47,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","E10V S36P S43V S69K",4
"lib1","SARS-CoV-2","TTGTAAGGGCAAAGGG",4,85.16,6.11,-4.66,0.78,1.5,1.23,0.02,">1 nonsynonymous","A89H N107P N118V",3
"lib1","SARS-CoV-2","TTGTAAGTGAGACGTA",6,24.24,6.85,-3.91,0.31,1.5,1.13,0.02,">1 nonsynonymous","A89Y S139P F160S V180G",4
"lib1","SARS-CoV-2","TTGTAATAAGAGCAAT",1,16.37,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","S45P Y93Q W106A",3
"lib1","SARS-CoV-2","TTGTAATAAGTCAGAC",1,7.69,10.36,-0.41,0.1,2.8,1,0,">1 nonsynonymous","F17Y N130E",2
"lib1","SARS-CoV-2","TTGTAATACAGGAGAT",8,51.49,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F17V P96Y F126Q L162Q",4
"lib1","SARS-CoV-2","TTGTAATACGCTGCAT",6,144.52,10.65,-0.11,0.05,2.88,1.08,0,">1 nonsynonymous","T3R F160S P191R",3
"lib1","SARS-CoV-2","TTGTAATCAACATTAG",13,528.43,10.66,-0.1,0.03,2.91,1.01,0,"1 nonsynonymous","C61L",1
"lib1","SARS-CoV-2","TTGTAATCCAGGACGG",4,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103A",1
"lib1","SARS-CoV-2","TTGTAATCCGATTAGC",4,11.06,6.16,-4.6,0.51,3,1.1,0.01,">1 nonsynonymous","P82S A89G",2
"lib1","SARS-CoV-2","TTGTAATGCTATTAAC",1,23.42,9.99,-0.77,0.1,2.17,1,0,">1 nonsynonymous","A89S S139L",2
"lib1","SARS-CoV-2","TTGTAATGTAGATAAT",2,31.96,10.08,-0.69,0.08,2.85,1,0,">1 nonsynonymous","E10R S41V S200P",3
"lib1","SARS-CoV-2","TTGTAATGTCCATATA",5,78.19,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","P7M L95H F167V",3
"lib1","SARS-CoV-2","TTGTACAAAACATGGA",5,123.27,10.6,-0.17,0.03,2.86,1.09,0,"1 nonsynonymous","G155A",1
"lib1","SARS-CoV-2","TTGTACAAACACCGTG",9,157.41,10.75,-0.02,0.08,2.86,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTACAACGCTAGAG",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R D34T A89L L122S T148I",5
"lib1","SARS-CoV-2","TTGTACAAGGTTTTGG",5,68.2,10.74,-0.03,0.05,2.95,1.04,0,">1 nonsynonymous","T15K N24R N58K",3
"lib1","SARS-CoV-2","TTGTACACGGGTAAAC",1,31.25,10.74,-0.03,0.04,2.97,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTACACTTAAAACT",1,5.56,10.1,-0.66,0.35,1.5,1.05,0.04,"1 nonsynonymous","A105L",1
"lib1","SARS-CoV-2","TTGTACAGGGATCAAG",2,47.5,7.17,-3.6,0.1,2.24,1.1,0,">1 nonsynonymous","C150I F156S",2
"lib1","SARS-CoV-2","TTGTACAGTGCTAACA",6,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I D98E Y123S I142L K199V",5
"lib1","SARS-CoV-2","TTGTACATAATTTCCG",4,6.45,6,-4.76,2,1.5,1.01,0.01,">1 nonsynonymous","C61W D68R",2
"lib1","SARS-CoV-2","TTGTACATTACGCAAG",6,58.61,10.14,-0.62,0.05,2.86,1.06,0,"1 nonsynonymous","Q168G",1
"lib1","SARS-CoV-2","TTGTACATTGAAGTCG",8,193.85,10.76,0,0.05,2.93,1.02,0,"1 nonsynonymous","S45T",1
"lib1","SARS-CoV-2","TTGTACCAAATAAGAT",3,0.36,NA,NA,NA,NA,NA,NA,"stop","N1R P7T I104V F134L F156* G174K T201N",7
"lib1","SARS-CoV-2","TTGTACCAGGTAATAT",3,48.53,10.69,-0.08,0.03,2.96,1.01,0,">1 nonsynonymous","I104W G174A",2
"lib1","SARS-CoV-2","TTGTACCATTGCCAAA",2,0.87,NA,NA,NA,NA,NA,NA,"stop","F12* F44S V65E T201S",4
"lib1","SARS-CoV-2","TTGTACCCAAGGCTGC",3,16.79,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R25K V77R D90G I138E",4
"lib1","SARS-CoV-2","TTGTACGAAGATAAAC",6,2.24,NA,NA,NA,NA,NA,NA,"stop","K56* T100N A105C L183S",4
"lib1","SARS-CoV-2","TTGTACGAGGCCCCAT",4,19.06,6.18,-4.58,0.84,1.5,1.15,0.03,">1 nonsynonymous","S41K S45Y V103E",3
"lib1","SARS-CoV-2","TTGTACGATAGATAGT",3,63.7,10.8,0.03,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTACTTAACCAGAC",4,37.89,8.19,-2.57,0.17,2.04,1.13,0.01,">1 nonsynonymous","P149R Y175K",2
"lib1","SARS-CoV-2","TTGTAGAAAAATAAAA",2,36.95,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A105V R124A K132F",3
"lib1","SARS-CoV-2","TTGTAGACTTAGGACC",2,5.34,6.43,-4.33,0.6,3,1.1,0.01,">1 nonsynonymous","V65S P96V G174D",3
"lib1","SARS-CoV-2","TTGTAGCACCAATCAC",4,41.16,8.4,-2.37,0.4,1.5,1,0.07,">1 nonsynonymous","A14D V32C P82I",3
"lib1","SARS-CoV-2","TTGTAGCATAAATACT",3,35.15,7.08,-3.69,0.47,1.5,1.16,0.06,">1 nonsynonymous","A81E A89W",2
"lib1","SARS-CoV-2","TTGTAGCATATCTAGC",2,11.91,6.21,-4.55,1.04,1.5,1.23,0.04,">1 nonsynonymous","N92I G174L",2
"lib1","SARS-CoV-2","TTGTAGCCTGCTCGAT",5,48,10.45,-0.32,0.06,2.96,1,0,"1 nonsynonymous","L162M",1
"lib1","SARS-CoV-2","TTGTAGCTTTTGGTTT",1,5.44,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","A105L P149L G155A",3
"lib1","SARS-CoV-2","TTGTAGGAAATCTTGA",2,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78M Y91T G101V S200K",4
"lib1","SARS-CoV-2","TTGTAGGCAGCTTTCA",6,39.31,10.83,0.07,0.06,2.9,1.04,0,">1 nonsynonymous","L5P A190E",2
"lib1","SARS-CoV-2","TTGTAGGCAGTGCTAT",1,13.22,10.82,0.05,0.09,2.94,1.04,0,"1 nonsynonymous","P149L",1
"lib1","SARS-CoV-2","TTGTAGGCGCCCATAA",6,0.31,NA,NA,NA,NA,NA,NA,"stop","Q144*",1
"lib1","SARS-CoV-2","TTGTAGGTCCCTTCAA",5,111.52,10.73,-0.03,0.04,2.95,1.03,0,">1 nonsynonymous","E141S T201R",2
"lib1","SARS-CoV-2","TTGTAGTTGCTAATAG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","N1I K48L S53F L162*",4
"lib1","SARS-CoV-2","TTGTATAAAAGGTGAT",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I A42Y I104T F167Y",4
"lib1","SARS-CoV-2","TTGTATAAAGTAAATA",1,51.38,10.12,-0.64,0.09,2.57,1.04,0,">1 nonsynonymous","V37E F99L",2
"lib1","SARS-CoV-2","TTGTATAACAACCAAC",4,72.64,9.16,-1.61,0.08,1.88,1.1,0,">1 nonsynonymous","S19N G83L F134N P149K",4
"lib1","SARS-CoV-2","TTGTATAACCTAATGT",7,24.81,7.71,-3.06,0.31,1.5,1,0.04,">1 nonsynonymous","A42C Y93S",2
"lib1","SARS-CoV-2","TTGTATAACGACACTT",6,35.1,6.53,-4.23,0.66,1.5,1.18,0.04,">1 nonsynonymous","A81E V103H",2
"lib1","SARS-CoV-2","TTGTATAATGATGGGT",3,9.81,8.96,-1.8,0.32,1.5,1.15,0.04,">1 nonsynonymous","C61E D90R F99I I104L V173K H189G",6
"lib1","SARS-CoV-2","TTGTATAATTCATAAT",1,29.04,10.25,-0.51,0.05,2.93,1,0,">1 nonsynonymous","F8V V37R",2
"lib1","SARS-CoV-2","TTGTATACAAAATATG",1,22.45,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","V37D K128W V180G A190C",4
"lib1","SARS-CoV-2","TTGTATACAAATAGAA",10,0.99,NA,NA,NA,NA,NA,NA,"stop","I2M V37* I142E",3
"lib1","SARS-CoV-2","TTGTATACCATAAGCA",9,187.2,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","L5F I28D G51T F62T",4
"lib1","SARS-CoV-2","TTGTATACTACCGTAC",4,39.64,10.56,-0.2,0.05,2.97,1.01,0,">1 nonsynonymous","S41R L60S",2
"lib1","SARS-CoV-2","TTGTATATACATATAT",2,9.73,NA,NA,NA,NA,NA,NA,"stop","E10* K198T",2
"lib1","SARS-CoV-2","TTGTATCTACATTCCG",3,122.68,10.18,-0.59,0.1,2.53,1.01,0,"1 nonsynonymous","A67S",1
"lib1","SARS-CoV-2","TTGTATGAGAGTGCAA",3,5.17,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","T63I K87L F99R Y119F F167N V173T",6
"lib1","SARS-CoV-2","TTGTATGTTAGAAACC",1,17.6,6,-4.76,2,3,1.05,0,">1 nonsynonymous","S19I Y91R",2
"lib1","SARS-CoV-2","TTGTATTAAATCCACT",4,27.05,6,-4.76,2,1.5,1.19,0,">1 nonsynonymous","K48W F62S V77S V103L Q168T",5
"lib1","SARS-CoV-2","TTGTATTACAGTTATA",2,9.25,10.74,-0.02,0.03,3,1,0,">1 nonsynonymous","K48L T201Y",2
"lib1","SARS-CoV-2","TTGTATTAGTAGAGTT",3,15.81,6,-4.76,2,1.5,1.19,0.06,">1 nonsynonymous","A14F F44V A105C S200Y",4
"lib1","SARS-CoV-2","TTGTCAAAACACCAGA",2,68.85,9.93,-0.84,0.08,2.39,1.04,0,"1 nonsynonymous","R124K",1
"lib1","SARS-CoV-2","TTGTCAAACTTATAGC",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTGTCAACCTGTTCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N24V L60Y T63S A105* C158R",5
"lib1","SARS-CoV-2","TTGTCAAGAATTTTTC",4,41.9,8.59,-2.17,0.14,1.66,1.13,0.01,">1 nonsynonymous","V11K T170S T201R",3
"lib1","SARS-CoV-2","TTGTCAAGGAAAACGC",4,99.77,6.59,-4.17,0.21,1.5,1.1,0,">1 nonsynonymous","K87F Y121I N171S Y175K",4
"lib1","SARS-CoV-2","TTGTCACAGACTGACT",8,65.6,6,-4.76,0.91,1.5,1.17,0.01,">1 nonsynonymous","C6P K48P",2
"lib1","SARS-CoV-2","TTGTCACTAACCGACG",10,25.47,8.64,-2.13,0.3,1.6,1.11,0.07,">1 nonsynonymous","I2T A42I D98K E135G G146V",5
"lib1","SARS-CoV-2","TTGTCACTAGAAATGC",2,12.42,6.07,-4.69,1.78,1.5,1.23,0.07,">1 nonsynonymous","W106L D112G",2
"lib1","SARS-CoV-2","TTGTCACTATTAACAA",2,73.86,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","D59M W106V Y159C",3
"lib1","SARS-CoV-2","TTGTCAGACAGCGAAC",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y Y39K C49K",3
"lib1","SARS-CoV-2","TTGTCAGAGCACGCAG",4,105.59,9.22,-1.55,0.05,2.82,1.11,0,"1 nonsynonymous","G166R",1
"lib1","SARS-CoV-2","TTGTCAGCGTTTGTAA",7,43.13,7.57,-3.19,0.26,1.5,1.07,0.03,">1 nonsynonymous","I2A F44T L183Y",3
"lib1","SARS-CoV-2","TTGTCAGTAAAAAGCA",2,16.47,6,-4.76,1.09,1.5,1.07,0.02,">1 nonsynonymous","N92K D97K",2
"lib1","SARS-CoV-2","TTGTCATAGAAGCCGC",5,39.74,8.62,-2.15,0.22,1.62,1.11,0.02,">1 nonsynonymous","Y21V T85M D90C L122A",4
"lib1","SARS-CoV-2","TTGTCCAAATGGATAA",3,8.65,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","S45K I104R D112F G174V",4
"lib1","SARS-CoV-2","TTGTCCAGCTACATAA",11,101.93,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","R25T P82D P149Y",3
"lib1","SARS-CoV-2","TTGTCCATGAAAACAT",4,217.2,8.72,-2.05,0.11,2.28,1.13,0,">1 nonsynonymous","C61P G74R T140R",3
"lib1","SARS-CoV-2","TTGTCCCAGCCTTTAA",2,93.62,9.07,-1.7,0.08,2.64,1.07,0,">1 nonsynonymous","Y35G N118S",2
"lib1","SARS-CoV-2","TTGTCCCCTGCTCTAC",7,134.07,10.71,-0.05,0.08,2.89,1.06,0,">1 nonsynonymous","N1F G9E L122M",3
"lib1","SARS-CoV-2","TTGTCCCTGAATATTA",7,138.45,10.61,-0.15,0.04,2.94,1.01,0,">1 nonsynonymous","E141S E186S",2
"lib1","SARS-CoV-2","TTGTCCGAAACATCAC",1,41.66,10.53,-0.24,0.06,2.91,1.02,0,"1 nonsynonymous","S41I",1
"lib1","SARS-CoV-2","TTGTCCGCATCTCCCA",3,57.74,10.65,-0.11,0.04,2.95,1.04,0,"1 nonsynonymous","N40M",1
"lib1","SARS-CoV-2","TTGTCCGTGATATTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I N130F",2
"lib1","SARS-CoV-2","TTGTCCTAAAGAGTTA",1,41.11,10.66,-0.11,0.09,2.87,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTCCTAACACAGCT",8,57.06,6,-4.76,2,1.5,1.2,0.05,">1 nonsynonymous","E10W Y93N",2
"lib1","SARS-CoV-2","TTGTCCTACAGCCAGG",5,68.08,10.63,-0.14,0.06,2.9,1.04,0,">1 nonsynonymous","T3H I142F N171T",3
"lib1","SARS-CoV-2","TTGTCCTCATTGCCGA",5,34.23,6.07,-4.7,0.7,3,1.49,0.01,">1 nonsynonymous","T15Y K56F S184E",3
"lib1","SARS-CoV-2","TTGTCCTTAGAGACAC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L60* T85L",2
"lib1","SARS-CoV-2","TTGTCGAAGGGTAAAA",4,118.96,10.04,-0.72,0.08,2.49,1.03,0,">1 nonsynonymous","F99L G152N",2
"lib1","SARS-CoV-2","TTGTCGCAGCTAAATT",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47H F99Y",2
"lib1","SARS-CoV-2","TTGTCGTAAAACAAGG",5,30.23,8.51,-2.25,0.26,1.56,1.12,0.03,"1 nonsynonymous","D112F",1
"lib1","SARS-CoV-2","TTGTCGTAGTAACACC",4,50.44,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","G9M D97V N157V",3
"lib1","SARS-CoV-2","TTGTCGTCCACAGATT",3,76.86,10.2,-0.57,0.07,2.73,1,0,">1 nonsynonymous","P7L N64R",2
"lib1","SARS-CoV-2","TTGTCGTTCTAAAGAG",1,5.55,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","V103H",1
"lib1","SARS-CoV-2","TTGTCTAACACATCGC",1,22,6,-4.76,2,3,1.1,0,">1 nonsynonymous","N1T P7H T100W S113M N120A F156D F167V",7
"lib1","SARS-CoV-2","TTGTCTAACCCTAAAC",6,175.71,8.11,-2.65,0.13,2.41,1.1,0.01,">1 nonsynonymous","A67I K87M Y119W K128N G174S",5
"lib1","SARS-CoV-2","TTGTCTAAGACAGATC",1,24.82,9.89,-0.88,0.13,2.51,1,0.01,">1 nonsynonymous","Y35N F62N",2
"lib1","SARS-CoV-2","TTGTCTAAGCTAGTTA",2,30.22,10.19,-0.57,0.1,2.76,1,0.01,"1 nonsynonymous","R25T",1
"lib1","SARS-CoV-2","TTGTCTAATTCAACCA",8,73.37,9.48,-1.29,0.19,1.5,1.15,0.02,">1 nonsynonymous","T100G Y123V T140S L188D",4
"lib1","SARS-CoV-2","TTGTCTACAACAACGA",3,42.09,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","Y35I G101S Y178F",3
"lib1","SARS-CoV-2","TTGTCTATCCGCCAGT",5,34.95,9.76,-1,0.06,2.83,1.04,0,">1 nonsynonymous","F44I A145C",2
"lib1","SARS-CoV-2","TTGTCTCGCATGTACG",3,75.77,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","A14I K87E Y91T F167A",4
"lib1","SARS-CoV-2","TTGTCTCTGCGTTAAA",1,26.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81H L125A R136F L162R",4
"lib1","SARS-CoV-2","TTGTCTGATCTGTAAA",1,20.33,9.53,-1.24,0.09,2.24,1,0.01,">1 nonsynonymous","A42F A145V Y178L",3
"lib1","SARS-CoV-2","TTGTCTGTGGCTATTC",4,69.4,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I72L A145T C150A K199F",4
"lib1","SARS-CoV-2","TTGTCTGTTATGCAAA",4,21.33,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F70L V103L N109L V181Y",4
"lib1","SARS-CoV-2","TTGTCTTGCCGATATT",3,17.89,10.95,0.18,0.12,2.78,1.1,0,"1 nonsynonymous","E10D",1
"lib1","SARS-CoV-2","TTGTCTTGGGCAACGT",2,0.83,NA,NA,NA,NA,NA,NA,"stop","F62S D75R E141*",3
"lib1","SARS-CoV-2","TTGTCTTGTTCCTGAA",2,109.86,9.38,-1.38,0.09,2.6,1.1,0,"1 nonsynonymous","Q176L",1
"lib1","SARS-CoV-2","TTGTGAAAAGACAGAC",4,47.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","L38R K48V G152L G174K",4
"lib1","SARS-CoV-2","TTGTGAACAAATAACA",2,2.13,NA,NA,NA,NA,NA,NA,"stop","T15L S45* G166C",3
"lib1","SARS-CoV-2","TTGTGAAGACATGTAG",5,55.24,10.74,-0.02,0.04,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGTGAATGTATCAAA",1,53.21,9.54,-1.23,0.12,2.39,1.05,0.01,"1 nonsynonymous","Q176K",1
"lib1","SARS-CoV-2","TTGTGAATTGTATGCC",2,0.91,NA,NA,NA,NA,NA,NA,"stop","G86* N107M T201N",3
"lib1","SARS-CoV-2","TTGTGACACGTACTAT",1,24.41,6,-4.76,2,3,1.21,0,">1 nonsynonymous","K48I G86N Y91A",3
"lib1","SARS-CoV-2","TTGTGACAGTTGCGAA",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119T F167S",2
"lib1","SARS-CoV-2","TTGTGACCTAAAGAAA",3,6.63,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2K A33F S45Y Y165D",4
"lib1","SARS-CoV-2","TTGTGACGAGTCACAC",1,29.33,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","N4V F44K N64E G101T H189S",5
"lib1","SARS-CoV-2","TTGTGACGCCGCACAC",1,15.54,6,-4.76,2,1.5,1.2,0.08,">1 nonsynonymous","R25P C49V A67Y D98S V103T",5
"lib1","SARS-CoV-2","TTGTGAGAGCACGGCG",4,88,10.48,-0.29,0.07,2.81,1.15,0,"1 nonsynonymous","T85D",1
"lib1","SARS-CoV-2","TTGTGAGATTTCAGCT",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M G83N",2
"lib1","SARS-CoV-2","TTGTGAGGACAAGTTT",2,150.33,10.53,-0.24,0.04,2.83,1.06,0,">1 nonsynonymous","A33M K132S",2
"lib1","SARS-CoV-2","TTGTGAGTAAAACAGG",4,31.34,10.38,-0.39,0.09,2.84,1,0.01,">1 nonsynonymous","N4P K87C",2
"lib1","SARS-CoV-2","TTGTGATTCCCTATGG",8,101.73,7.71,-3.05,0.25,1.5,1.11,0.02,">1 nonsynonymous","S139I G155Y",2
"lib1","SARS-CoV-2","TTGTGATTTAAAGCAA",4,92.98,9.54,-1.22,0.08,2.46,1.09,0,">1 nonsynonymous","P96T K128S T170S",3
"lib1","SARS-CoV-2","TTGTGATTTTTAGATC",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K Y66I Q84H C102R",4
"lib1","SARS-CoV-2","TTGTGCACCATGTGGA",2,68.48,10.5,-0.27,0.04,2.9,1.04,0,"1 nonsynonymous","S29I",1
"lib1","SARS-CoV-2","TTGTGCATACATCAGT",4,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83K F99N S108A S200V",4
"lib1","SARS-CoV-2","TTGTGCATCCGACATT",2,61.6,9.38,-1.39,0.07,2.82,1.07,0,">1 nonsynonymous","T140Y T170R T201V",3
"lib1","SARS-CoV-2","TTGTGCCACACTCTGT",1,10.71,6.34,-4.43,1.18,1.5,1.11,0.08,">1 nonsynonymous","G83D D112T N118F",3
"lib1","SARS-CoV-2","TTGTGCGAGGATATTT",1,0.5,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTGTGCGATTCAATTA",3,13.45,9.29,-1.48,0.26,1.62,1.24,0.03,">1 nonsynonymous","K114D R136F",2
"lib1","SARS-CoV-2","TTGTGCTACTTACCCA",1,39.33,8.55,-2.21,0.15,1.86,1.21,0.01,">1 nonsynonymous","E10K T63F I142A",3
"lib1","SARS-CoV-2","TTGTGGAGTATGGCTT",2,0.36,NA,NA,NA,NA,NA,NA,"stop","F62S P82Q Y143*",3
"lib1","SARS-CoV-2","TTGTGGCAAAAAGCTA",4,93.15,9.43,-1.33,0.1,1.8,1.12,0,">1 nonsynonymous","G116S Y123L P133S T148K",4
"lib1","SARS-CoV-2","TTGTGTAACCTGTTCT",4,1.4,NA,NA,NA,NA,NA,NA,"stop","N64* F99L E141K",3
"lib1","SARS-CoV-2","TTGTGTAAGTTGGGGT",3,48.05,8.16,-2.61,0.13,1.66,1.09,0.01,">1 nonsynonymous","Y91T Q168G",2
"lib1","SARS-CoV-2","TTGTGTCTCCCCGCTT",4,21.61,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","S19Q D90Y F126K",3
"lib1","SARS-CoV-2","TTGTGTGAATGCATAC",1,71.87,10.43,-0.33,0.04,2.9,1.01,0,"1 nonsynonymous","G174H",1
"lib1","SARS-CoV-2","TTGTGTTATACTAGAA",1,7.66,10.82,0.06,0.13,2.78,1.14,0.01,">1 nonsynonymous","T46L L60M",2
"lib1","SARS-CoV-2","TTGTGTTTCCATTCCA",4,82.93,10.8,0.04,0.08,2.95,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTTAAAAAGTCTAA",3,4.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y178F",1
"lib1","SARS-CoV-2","TTGTTAAAAATTCCCT",3,92.51,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","V37Y F47I L60G A81T Y91V R127V P161H Q176H",8
"lib1","SARS-CoV-2","TTGTTAAACTATTAGC",1,41.47,10.81,0.04,0.05,2.92,1.04,0,"1 nonsynonymous","K128V",1
"lib1","SARS-CoV-2","TTGTTAAAGATGACTA",4,18.77,6.28,-4.48,0.38,2.04,1.16,0.01,">1 nonsynonymous","D112L F134T",2
"lib1","SARS-CoV-2","TTGTTAACGTAGGTTG",5,59.59,10.67,-0.1,0.06,2.83,1.09,0,"1 nonsynonymous","V77L",1
"lib1","SARS-CoV-2","TTGTTAACTAGCACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66S G86S G174*",3
"lib1","SARS-CoV-2","TTGTTAAGAACGAATA",4,20.44,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","I104K I142G",2
"lib1","SARS-CoV-2","TTGTTAAGAATCCGAG",7,32.76,8.43,-2.33,0.2,1.65,1.12,0.01,">1 nonsynonymous","P82A K87S",2
"lib1","SARS-CoV-2","TTGTTAAGCGCCAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N58A G101M N107F S129* K198D",5
"lib1","SARS-CoV-2","TTGTTAATAAAACCCA",4,12.14,7.49,-3.28,0.29,1.5,1.2,0.02,">1 nonsynonymous","D97G Y143R",2
"lib1","SARS-CoV-2","TTGTTACAACCAACAT",3,9.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9R R27L N58T A81M G152N",5
"lib1","SARS-CoV-2","TTGTTACAAGATGCGA",2,10.69,6,-4.76,2,1.5,1.12,0.04,">1 nonsynonymous","S19L D34A S113F I142V C150I K199H",6
"lib1","SARS-CoV-2","TTGTTACAATCCTATT",8,43.48,10.7,-0.07,0.07,2.78,1.17,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGTTACAGTTATATA",5,2.95,NA,NA,NA,NA,NA,NA,"stop","P7K L60* I88R P177S",4
"lib1","SARS-CoV-2","TTGTTACCCAAAAATA",2,39.82,10.11,-0.66,0.05,2.98,1,0,"1 nonsynonymous","T170M",1
"lib1","SARS-CoV-2","TTGTTACCCAGGTTAA",8,45.56,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V20M T46L V103T G116S",4
"lib1","SARS-CoV-2","TTGTTACGAAGCTATT",5,27.96,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","V37C Y91S V103L K128S",4
"lib1","SARS-CoV-2","TTGTTACTACAGAGAC",1,37.1,10.13,-0.63,0.08,2.8,1.05,0,">1 nonsynonymous","S45R S184Y",2
"lib1","SARS-CoV-2","TTGTTAGAAACTTTTC",4,41.13,9.36,-1.4,0.08,2.73,1.16,0,">1 nonsynonymous","Y119S E141V",2
"lib1","SARS-CoV-2","TTGTTAGACTAACGCA",4,29.39,10.5,-0.27,0.09,2.79,1.06,0,">1 nonsynonymous","G83C T193H",2
"lib1","SARS-CoV-2","TTGTTAGCATAATGTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P96R C102Q E141* P149L S200I",5
"lib1","SARS-CoV-2","TTGTTAGCCAGACTGT",10,82.69,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","Y93G G146V G166R",3
"lib1","SARS-CoV-2","TTGTTAGGATTCTCAT",3,1218.75,10.05,-0.72,0.04,2.9,1,0,"1 nonsynonymous","N118Y",1
"lib1","SARS-CoV-2","TTGTTATCCTGAACCA",6,8.13,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C49R P149G L183G",3
"lib1","SARS-CoV-2","TTGTTATGAACCAGCA",5,161.69,10.59,-0.17,0.04,2.95,1.01,0,">1 nonsynonymous","G9W S43Y G83Y",3
"lib1","SARS-CoV-2","TTGTTCAAAAGATGAG",5,20.05,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","C31Y F167Q",2
"lib1","SARS-CoV-2","TTGTTCAAAGGCTCCC",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S A14C T55I F99T",4
"lib1","SARS-CoV-2","TTGTTCAACGTTAAAA",3,37.22,9.88,-0.89,0.04,2.91,1.05,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","TTGTTCACGGACTAAG",12,106.13,6.29,-4.48,0.63,1.5,1.14,0.02,">1 nonsynonymous","F17L A105L",2
"lib1","SARS-CoV-2","TTGTTCACTTCAGACA",3,15.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81T G83D F134W P161W",4
"lib1","SARS-CoV-2","TTGTTCATATCCCCCT",4,42.08,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V103Y I142W",2
"lib1","SARS-CoV-2","TTGTTCATCCCATCAG",1,68.09,6,-4.76,1.8,1.5,1.15,0.02,">1 nonsynonymous","A89E D98V S113A N120T",4
"lib1","SARS-CoV-2","TTGTTCATCGAGACTG",1,24.3,10.86,0.09,0.08,2.96,1.01,0,"1 nonsynonymous","N130P",1
"lib1","SARS-CoV-2","TTGTTCATTGGAAAAA",9,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y T15Y A89D R136M",4
"lib1","SARS-CoV-2","TTGTTCCCATTAGACG",3,2.57,NA,NA,NA,NA,NA,NA,"stop","Y50R G101* S147N T201L",4
"lib1","SARS-CoV-2","TTGTTCCCCAAGCATT",1,9.19,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","N58C G86W N107G",3
"lib1","SARS-CoV-2","TTGTTCCTGCCTCTCA",1,7.62,6,-4.76,2,3,1.17,0.01,">1 nonsynonymous","T3S N58I Y123T C158T",4
"lib1","SARS-CoV-2","TTGTTCCTTTACGTGG",1,12,10.3,-0.46,0.08,2.98,1.03,0,"1 nonsynonymous","V77M",1
"lib1","SARS-CoV-2","TTGTTCGAGAACAACC",13,100.52,10.76,0,0.06,2.9,1.05,0,"1 nonsynonymous","R27K",1
"lib1","SARS-CoV-2","TTGTTCGGAGTACGCT",3,29.61,6,-4.76,2,1.5,1.32,0.05,">1 nonsynonymous","A14T Y91V F99T S113M",4
"lib1","SARS-CoV-2","TTGTTCTAAACGAGAG",6,184.46,10.78,0.02,0.08,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTTCTAACTGACAC",6,19.9,6,-4.76,2,1.5,1.3,0.06,"1 nonsynonymous","V103P",1
"lib1","SARS-CoV-2","TTGTTCTATCTTTGGA",6,133.91,9.97,-0.79,0.09,2.14,1.01,0,"1 nonsynonymous","W106V",1
"lib1","SARS-CoV-2","TTGTTCTTTAAACAGC",1,8.42,9.25,-1.51,0.15,2.66,1.24,0.01,"1 nonsynonymous","Q168V",1
"lib1","SARS-CoV-2","TTGTTGAAAGGTTTGC",3,37.73,9.18,-1.58,0.24,1.67,1.19,0.02,">1 nonsynonymous","A33P W106M F185L",3
"lib1","SARS-CoV-2","TTGTTGACGTAGGACT",5,179.36,9.48,-1.28,0.1,2.62,1.1,0,">1 nonsynonymous","R73L H189T S200F",3
"lib1","SARS-CoV-2","TTGTTGATTCTGCGCA",11,127.71,10.8,0.03,0.06,2.9,1.04,0,">1 nonsynonymous","A192Q T201I",2
"lib1","SARS-CoV-2","TTGTTGCAAGAAAAGC",2,1.01,NA,NA,NA,NA,NA,NA,"stop","N58H G86I L95R N151F E154* K199*",6
"lib1","SARS-CoV-2","TTGTTGCGCTAATGAT",2,24.12,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","Y21W Y50T D97S N157A",4
"lib1","SARS-CoV-2","TTGTTGCTACAGCTTA",2,58.2,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","G86P D112V N151S Y165S Q176A",5
"lib1","SARS-CoV-2","TTGTTGCTGAACTGCA",9,236.28,10.43,-0.33,0.04,2.89,1.04,0,">1 nonsynonymous","T46M I142F",2
"lib1","SARS-CoV-2","TTGTTGGCCAACAACA",1,16.11,10.18,-0.59,0.07,2.92,1.02,0,">1 nonsynonymous","C6G Y35L",2
"lib1","SARS-CoV-2","TTGTTGGCTGGAAAAG",2,17.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R Y159M",2
"lib1","SARS-CoV-2","TTGTTGGGTACCGAGG",10,36.68,6,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","C49S Q79S K94N T148V",4
"lib1","SARS-CoV-2","TTGTTGTAGACTATAT",4,37.65,6,-4.76,2,3,1.12,0,">1 nonsynonymous","F8R A42D Y91K S184R",4
"lib1","SARS-CoV-2","TTGTTGTATTAAAACC",6,23.83,6.76,-4,0.49,1.5,1.13,0.08,">1 nonsynonymous","S113T Y143G N171C",3
"lib1","SARS-CoV-2","TTGTTGTTATATAAAG",3,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S T148S",2
"lib1","SARS-CoV-2","TTGTTTAAATACGGGC",5,32.85,6.47,-4.3,0.29,1.5,1.1,0.01,">1 nonsynonymous","V71W V103C",2
"lib1","SARS-CoV-2","TTGTTTAAGTCGAATT",4,0,NA,NA,NA,NA,NA,NA,"stop","K56I G83* F99A N120P K128R",5
"lib1","SARS-CoV-2","TTGTTTAATTGAAAAA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T G51I S129A N157D",4
"lib1","SARS-CoV-2","TTGTTTACCTAAGCTG",6,46.7,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","Y91T D98Y P169L",3
"lib1","SARS-CoV-2","TTGTTTAGCATATATC",12,221.83,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S45K G86N K114L",3
"lib1","SARS-CoV-2","TTGTTTATACCCCAAA",3,66.82,9.87,-0.9,0.06,2.57,1.03,0,"1 nonsynonymous","Y91Q",1
"lib1","SARS-CoV-2","TTGTTTATCTACCGTT",9,142.87,10.72,-0.04,0.06,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTGTTTATGGTTACAG",12,189.66,10.74,-0.03,0.04,2.94,1.04,0,"1 nonsynonymous","F62A",1
"lib1","SARS-CoV-2","TTGTTTATTATTGTAC",2,8.14,7.89,-2.87,0.29,1.5,1.05,0.04,">1 nonsynonymous","S45Y G86L K199C",3
"lib1","SARS-CoV-2","TTGTTTCAATAAACCA",1,48.94,10.69,-0.08,0.09,2.87,1.07,0,">1 nonsynonymous","F8L S41L",2
"lib1","SARS-CoV-2","TTGTTTCACAGTGATA",1,14.95,6,-4.76,2,1.5,1.16,0.06,">1 nonsynonymous","F12K T46S D59A D90A W106Y",5
"lib1","SARS-CoV-2","TTGTTTCACCTATTAT",2,33.33,10.58,-0.18,0.06,2.84,1.12,0,">1 nonsynonymous","D90Q S129I",2
"lib1","SARS-CoV-2","TTGTTTCAGGGATGGC",5,108,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S41P C49R G196W",3
"lib1","SARS-CoV-2","TTGTTTCGTGAAACCA",6,47.48,7.29,-3.48,0.25,1.5,1.11,0.01,">1 nonsynonymous","A14L S29A Q144C",3
"lib1","SARS-CoV-2","TTGTTTGAATGAAAAG",7,94.34,10.85,0.08,0.08,2.93,1.01,0,"1 nonsynonymous","L5V",1
"lib1","SARS-CoV-2","TTGTTTGCAGTTTGCC",5,86.48,10.85,0.09,0.08,2.86,1.06,0,"1 nonsynonymous","T201F",1
"lib1","SARS-CoV-2","TTGTTTGGATTAATAA",1,50.94,10.78,0.01,0.08,2.95,1,0,">1 nonsynonymous","V32W A42P P149A",3
"lib1","SARS-CoV-2","TTGTTTGGCTTGTTGG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A18G V71Y A81I Y175C S200*",5
"lib1","SARS-CoV-2","TTGTTTGTAACAATAT",7,87.35,10.28,-0.49,0.05,2.91,1,0,">1 nonsynonymous","G9K P54G T85V",3
"lib1","SARS-CoV-2","TTGTTTGTGCCCTACG",4,98.62,8.86,-1.9,0.06,2.88,1.05,0,">1 nonsynonymous","A42I C61E G117L",3
"lib1","SARS-CoV-2","TTGTTTTAAAGAAATT",2,42.77,10.73,-0.03,0.11,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTGTTTTCACATAACA",8,0.43,NA,NA,NA,NA,NA,NA,"stop","V11S C49V N58M R179*",4
"lib1","SARS-CoV-2","TTGTTTTGGTACTAAC",10,11.27,NA,NA,NA,NA,NA,NA,"stop","P54Q I88K P96H D97L C102* S113V L122M Q176S",8
"lib1","SARS-CoV-2","TTGTTTTGTTCATAAG",3,93.6,10.8,0.03,0.06,2.87,1.06,0,"1 nonsynonymous","T55L",1
"lib1","SARS-CoV-2","TTGTTTTTGGAATAGG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57K",1
"lib1","SARS-CoV-2","TTTAAAAAAATTATAA",5,0.7,NA,NA,NA,NA,NA,NA,"stop","F44* F70L D98G L122K",4
"lib1","SARS-CoV-2","TTTAAAAAAGTAAGTA",2,49.74,10.5,-0.26,0.08,2.76,1.09,0,">1 nonsynonymous","A22Q K114R E141H",3
"lib1","SARS-CoV-2","TTTAAAAAATGCAGAA",8,168.67,10.73,-0.03,0.07,2.91,1.04,0,">1 nonsynonymous","I2K R16Y",2
"lib1","SARS-CoV-2","TTTAAAAAATTCCCGG",4,50.44,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","L57I Y91D G166R",3
"lib1","SARS-CoV-2","TTTAAAAACATGCAGT",4,31.43,10.77,0,0.14,2.76,1.09,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAAAATATGAGCG",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I D68L",2
"lib1","SARS-CoV-2","TTTAAAAATGTTAATC",2,87.34,10.66,-0.1,0.05,2.92,1.04,0,"1 nonsynonymous","Y121Q",1
"lib1","SARS-CoV-2","TTTAAAACAGAGACAG",1,0.22,NA,NA,NA,NA,NA,NA,"stop","V37* G155Y",2
"lib1","SARS-CoV-2","TTTAAAACAGATACGG",3,45.82,10.7,-0.06,0.08,2.84,1.07,0,"1 nonsynonymous","F185L",1
"lib1","SARS-CoV-2","TTTAAAACATTTACAC",4,14.5,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","C49F I88Q",2
"lib1","SARS-CoV-2","TTTAAAACCAAATGAC",1,60.63,8.2,-2.57,0.17,1.5,1.16,0.01,">1 nonsynonymous","C6I L38T L60S K132H P197K",5
"lib1","SARS-CoV-2","TTTAAAACCTGCGAGG",3,63.5,10.43,-0.34,0.05,2.85,1.06,0,">1 nonsynonymous","K56D G83T",2
"lib1","SARS-CoV-2","TTTAAAACTAAATATA",1,18.13,10.64,-0.12,0.08,2.98,1,0,"1 nonsynonymous","P7S",1
"lib1","SARS-CoV-2","TTTAAAACTCATCAAG",4,53.88,10.15,-0.61,0.06,2.81,1,0,">1 nonsynonymous","A18S S139V",2
"lib1","SARS-CoV-2","TTTAAAAGAAAGCCTA",3,7.76,9.73,-1.04,0.39,1.6,1.04,0.07,">1 nonsynonymous","T15R A81G N107S P149D",4
"lib1","SARS-CoV-2","TTTAAAAGAAGAGAAA",5,63.43,10.42,-0.34,0.05,2.88,1.06,0,"1 nonsynonymous","G83D",1
"lib1","SARS-CoV-2","TTTAAAAGGGCCTTCG",10,126.54,10.64,-0.12,0.06,2.88,1.02,0,"1 nonsynonymous","N30K",1
"lib1","SARS-CoV-2","TTTAAAATACAACTCA",1,17.04,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","K26A N107Y R127I Q168S",4
"lib1","SARS-CoV-2","TTTAAAATATATTGAT",8,45.83,6.32,-4.45,0.63,1.5,1.13,0.02,">1 nonsynonymous","I2T D75N I88V N107F C158Y",5
"lib1","SARS-CoV-2","TTTAAAATCACTTTTA",2,2.18,NA,NA,NA,NA,NA,NA,"stop","G83W D112* G146L F160Y",4
"lib1","SARS-CoV-2","TTTAAAATCTGTATTC",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R P96T",2
"lib1","SARS-CoV-2","TTTAAAATCTTAGATA",3,61.28,6,-4.76,2,1.5,1.15,0.01,"1 nonsynonymous","G172L",1
"lib1","SARS-CoV-2","TTTAAAATGAGAATCA",5,68.02,10.66,-0.1,0.09,2.85,1.1,0,"1 nonsynonymous","P191H",1
"lib1","SARS-CoV-2","TTTAAAATGCTCATGA",1,16.19,10.7,-0.07,0.05,2.96,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAAATTAATACCC",1,29.55,10.29,-0.48,0.11,2.76,1.03,0.01,"1 nonsynonymous","Y165W",1
"lib1","SARS-CoV-2","TTTAAAATTAGCTAGG",1,17.5,10.75,-0.02,0.06,2.97,1,0,">1 nonsynonymous","R16K N40Y",2
"lib1","SARS-CoV-2","TTTAAAATTATTGGCA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","S45I I88* Y143V G166T Y178V",5
"lib1","SARS-CoV-2","TTTAAAATTCACACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37G K87* T100R",3
"lib1","SARS-CoV-2","TTTAAAATTGAAGTCA",1,34.94,6.17,-4.6,0.6,1.5,1.17,0.01,">1 nonsynonymous","F44P A67T Y91F W106D L122S",5
"lib1","SARS-CoV-2","TTTAAACAGGGAAAAT",1,25.04,10.71,-0.06,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAACATCTGAGAG",1,28.1,9.48,-1.29,0.12,2.08,1.12,0.01,">1 nonsynonymous","Y123E P149T",2
"lib1","SARS-CoV-2","TTTAAACCAAAAGTGA",7,71.94,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","L5R W23S F47D",3
"lib1","SARS-CoV-2","TTTAAACCAGACGACC",10,74.18,9.87,-0.89,0.2,1.54,1.09,0.02,">1 nonsynonymous","C49T A89S T148S S200L",4
"lib1","SARS-CoV-2","TTTAAACCTCAACCAT",15,241.14,10.07,-0.7,0.07,2.61,1.02,0,">1 nonsynonymous","S41Y G51C",2
"lib1","SARS-CoV-2","TTTAAACGCGCCATTC",1,27.11,10.31,-0.46,0.08,2.71,1.06,0,">1 nonsynonymous","N24I N130L",2
"lib1","SARS-CoV-2","TTTAAACGGCCGTTAG",1,45.34,10.71,-0.05,0.04,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAACTACAAAAAA",5,53.03,10.62,-0.14,0.03,2.9,1.02,0,">1 nonsynonymous","N4L T100L T148S",3
"lib1","SARS-CoV-2","TTTAAACTGTTATTAG",7,325.7,10.77,0,0.04,2.93,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAACTTATGTATT",4,81.71,10.78,0.02,0.07,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAACTTGAAAAAA",2,60.19,10.64,-0.13,0.06,2.96,1.04,0,"1 nonsynonymous","L122R",1
"lib1","SARS-CoV-2","TTTAAACTTGAGACAT",3,44.36,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","V37Y V65G R124H",3
"lib1","SARS-CoV-2","TTTAAACTTTGAAAGG",1,19.83,10.65,-0.11,0.05,2.95,1.02,0,"1 nonsynonymous","G9K",1
"lib1","SARS-CoV-2","TTTAAAGACCCTGTTA",2,2.2,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAAGAGAAACAGA",7,102.04,10.75,-0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAAGATAAAAAAA",8,63.78,10.74,-0.03,0.05,2.93,1,0,"1 nonsynonymous","K48C",1
"lib1","SARS-CoV-2","TTTAAAGATGCACTAC",7,25.75,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Y21V K56H G86A Y121Q",4
"lib1","SARS-CoV-2","TTTAAAGATGCCTCAG",6,22.51,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","V37E T63N G172Y",3
"lib1","SARS-CoV-2","TTTAAAGCAAAACCCA",2,36.97,10.34,-0.43,0.07,2.8,1.01,0,"1 nonsynonymous","N107S",1
"lib1","SARS-CoV-2","TTTAAAGCACGGTAAA",2,4.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42T",1
"lib1","SARS-CoV-2","TTTAAAGCCCAGCGAT",4,50.29,8.69,-2.07,0.29,1.61,1.16,0.04,">1 nonsynonymous","V77Y K114T",2
"lib1","SARS-CoV-2","TTTAAAGGAATCTTAT",3,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D P54I L95T N107V",4
"lib1","SARS-CoV-2","TTTAAAGTCTATTCAG",10,61.74,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","N4L G86R W106L Y123T Y143N P149T",6
"lib1","SARS-CoV-2","TTTAAAGTGGATCTAC",2,13.83,10.62,-0.14,0.1,2.95,1.03,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAATAAAGAACAA",7,64.02,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","C6K Y50C G117V",3
"lib1","SARS-CoV-2","TTTAAATAAATCACAT",1,72.99,6.06,-4.7,0.31,2.28,1.11,0,">1 nonsynonymous","L5S T100N C158N",3
"lib1","SARS-CoV-2","TTTAAATAAATTGGGG",6,37.55,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","S36L F99G N107E T148D P197Q",5
"lib1","SARS-CoV-2","TTTAAATAACTTCAAC",2,21.85,8.64,-2.13,0.14,2.59,1.13,0.01,">1 nonsynonymous","F47L L60K E141D G166H",4
"lib1","SARS-CoV-2","TTTAAATAAGGGGCTT",2,18.78,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","Y35E V77E D90I N118I Q144V N157P",6
"lib1","SARS-CoV-2","TTTAAATAAGTCCGCA",4,19.58,6.33,-4.43,0.44,2.35,1.17,0.01,"1 nonsynonymous","C150P",1
"lib1","SARS-CoV-2","TTTAAATACCCCATTA",5,168.34,8.18,-2.59,0.14,1.76,1.13,0.01,">1 nonsynonymous","V71L N107K S200I",3
"lib1","SARS-CoV-2","TTTAAATAGATTGAGG",5,20.86,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9A A22T S108R D112N",4
"lib1","SARS-CoV-2","TTTAAATATATAGGAG",2,63.12,10.16,-0.61,0.06,2.67,1,0,"1 nonsynonymous","C31Y",1
"lib1","SARS-CoV-2","TTTAAATATGAAAATC",8,118.18,8.68,-2.09,0.13,2.19,1.19,0.01,">1 nonsynonymous","L60S N118I",2
"lib1","SARS-CoV-2","TTTAAATCACCCTCAA",4,34.57,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","R127M A145G P169I",3
"lib1","SARS-CoV-2","TTTAAATGCTATATTC",1,53.8,10.68,-0.08,0.05,2.91,1.04,0,"1 nonsynonymous","D59G",1
"lib1","SARS-CoV-2","TTTAAATGTGGTTCCC",2,12.56,9.07,-1.7,0.29,1.5,1.01,0.05,">1 nonsynonymous","V77A P133A T140R",3
"lib1","SARS-CoV-2","TTTAACAAAAACCACC",4,564.79,10.8,0.03,0.05,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTAACAACCTAGGAA",8,54.09,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","V52N K94Q F156S S200K",4
"lib1","SARS-CoV-2","TTTAACAAGACCATAA",1,7.74,6,-4.76,2,3,1.07,0.01,">1 nonsynonymous","C6K K26S C61K Y93D Y123R F134W",6
"lib1","SARS-CoV-2","TTTAACAAGTGAAGAG",2,136.03,10.76,-0.01,0.06,2.89,1.06,0,">1 nonsynonymous","T148L A192V",2
"lib1","SARS-CoV-2","TTTAACAATGGTAAAC",2,37.6,10.79,0.03,0.07,2.93,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAACACAACCTAAA",5,1.24,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TTTAACACAAGTTTAG",1,8.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40D K87N D98A D112S Y165M",5
"lib1","SARS-CoV-2","TTTAACACACCCCTCT",4,112.29,10.78,0.02,0.07,2.91,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAACACACTATGTT",6,211.85,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","F70G F160C Q168W",3
"lib1","SARS-CoV-2","TTTAACACATTAAGCT",4,2.14,NA,NA,NA,NA,NA,NA,"stop","T3D D68K G83Y N107* G146R",5
"lib1","SARS-CoV-2","TTTAACAGACTGATTG",3,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Y F44A Q84P Y123S Q168V",5
"lib1","SARS-CoV-2","TTTAACAGAGCGAAAT",3,13.27,6,-4.76,2,1.5,1.17,0.04,">1 nonsynonymous","A42G W106Y Y119G P161F G172A V180L",6
"lib1","SARS-CoV-2","TTTAACAGAGTTTGAG",7,82.57,7.18,-3.58,0.33,1.5,1.2,0.02,"1 nonsynonymous","D68N",1
"lib1","SARS-CoV-2","TTTAACAGGACGGATG",3,18.22,6.03,-4.73,1.14,1.5,1.06,0.03,">1 nonsynonymous","L5P A33D F44C S53V N64H N107Y P149R",7
"lib1","SARS-CoV-2","TTTAACATGAGTGGAA",5,138.96,10.8,0.03,0.07,2.94,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAACATGGTTCGAT",2,69.69,10.48,-0.28,0.09,2.79,1.14,0,">1 nonsynonymous","L5P R27E S36Y",3
"lib1","SARS-CoV-2","TTTAACCAAGTTCAAG",5,48.19,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C6G C49N",2
"lib1","SARS-CoV-2","TTTAACCATCGACCAA",2,29.97,8.31,-2.46,0.2,2.12,1.14,0.02,">1 nonsynonymous","A33I D59S Y66S G117L",4
"lib1","SARS-CoV-2","TTTAACCCAGCCGTTT",5,158.62,9.66,-1.11,0.07,2.75,1.06,0,">1 nonsynonymous","K56V N118H",2
"lib1","SARS-CoV-2","TTTAACCGCATAACAC",2,15.01,6,-4.76,1.68,3,1.21,0.01,">1 nonsynonymous","G9M D90L C102S V115M",4
"lib1","SARS-CoV-2","TTTAACCTAAATTCAC",3,0.25,NA,NA,NA,NA,NA,NA,"stop","N4S K48S W106* G116M T201L",5
"lib1","SARS-CoV-2","TTTAACGAACACACAT",4,45.16,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88N S113V Y175T A190S",4
"lib1","SARS-CoV-2","TTTAACGAACATTTAC",1,35.73,10.62,-0.14,0.08,2.97,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAACGAAGAAATCT",1,40.66,10.01,-0.76,0.04,2.82,1.04,0,"1 nonsynonymous","Y121V",1
"lib1","SARS-CoV-2","TTTAACGAATTAACAA",2,55.35,10.76,-0.01,0.08,2.88,1.09,0,">1 nonsynonymous","K56R F62I",2
"lib1","SARS-CoV-2","TTTAACGAGTTTCATT",1,20.82,10.22,-0.54,0.07,2.82,1.1,0,">1 nonsynonymous","T85R Q144L",2
"lib1","SARS-CoV-2","TTTAACGATAACTATT",3,65.84,6.11,-4.66,0.98,1.5,1.19,0.03,">1 nonsynonymous","R25S L38P F62V R124L",4
"lib1","SARS-CoV-2","TTTAACGATAATAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* Y123S",2
"lib1","SARS-CoV-2","TTTAACGCTAAGAAAG",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A Q176F",2
"lib1","SARS-CoV-2","TTTAACGGCTTTACGT",6,105.53,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N30T Y91S D97Q G172S",4
"lib1","SARS-CoV-2","TTTAACGTAACAATAC",6,5.95,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8V A42L N64P Y93L K199L",5
"lib1","SARS-CoV-2","TTTAACGTCTAACAGA",11,115.32,8.59,-2.17,0.17,1.5,1.09,0.01,">1 nonsynonymous","I2T C6V G83D A89S",4
"lib1","SARS-CoV-2","TTTAACGTTGACGTCA",5,19.2,6,-4.76,2,3,1.08,0.01,">1 nonsynonymous","G86Y I104T F134L",3
"lib1","SARS-CoV-2","TTTAACGTTTACAACA",4,102.68,10.04,-0.73,0.1,2.47,1.03,0,">1 nonsynonymous","Y35S G83S",2
"lib1","SARS-CoV-2","TTTAACTACAAGTTAT",7,85.46,9.36,-1.41,0.24,1.5,1.05,0.03,"1 nonsynonymous","G86W",1
"lib1","SARS-CoV-2","TTTAACTAGCAACCAA",11,175.38,10.7,-0.06,0.04,2.95,1.01,0,"1 nonsynonymous","S139E",1
"lib1","SARS-CoV-2","TTTAACTATAAGACAT",2,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S S113M L122E G152S N171F",5
"lib1","SARS-CoV-2","TTTAACTCTATGATAG",7,88.89,10.74,-0.02,0.04,2.96,1.01,0,">1 nonsynonymous","V37L K56N N120H",3
"lib1","SARS-CoV-2","TTTAACTTTTAATAAA",1,8.71,10.3,-0.46,0.08,2.86,1.04,0.01,"1 nonsynonymous","S147C",1
"lib1","SARS-CoV-2","TTTAAGAAAAATGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14G P82* L122V",3
"lib1","SARS-CoV-2","TTTAAGAAAGATAAGG",2,0.74,NA,NA,NA,NA,NA,NA,"stop","F167* V180I T201*",3
"lib1","SARS-CoV-2","TTTAAGAATAAGGCAG",1,11.68,6,-4.76,2,1.5,1.04,0,">1 nonsynonymous","I2F F17G Y50T N107Y E141M",5
"lib1","SARS-CoV-2","TTTAAGAATATCATAA",1,45.18,9.73,-1.03,0.06,2.86,1.03,0,">1 nonsynonymous","L122E S184N A190L",3
"lib1","SARS-CoV-2","TTTAAGAATCACAACA",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103A N151Q",2
"lib1","SARS-CoV-2","TTTAAGAATTCACATC",1,11.42,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R25L D90K S129I",3
"lib1","SARS-CoV-2","TTTAAGACAAAGGTTA",1,13.33,10.74,-0.03,0.08,2.82,1.12,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAAGACAGCAAGAT",1,19.9,9.41,-1.35,0.34,1.5,1.02,0.06,">1 nonsynonymous","N1E L38T G174F",3
"lib1","SARS-CoV-2","TTTAAGACCCCTGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T F156L T201Y",3
"lib1","SARS-CoV-2","TTTAAGAGAAGCTGGA",7,71.69,10.76,0,0.06,2.91,1.05,0,"1 nonsynonymous","K198R",1
"lib1","SARS-CoV-2","TTTAAGAGCAGAGGCT",1,15.4,10.67,-0.09,0.23,2.9,1,0.02,">1 nonsynonymous","T3R G9A I138L",3
"lib1","SARS-CoV-2","TTTAAGAGGCCAACAT",1,26.03,10.39,-0.38,0.11,2.86,1.01,0.01,"1 nonsynonymous","N58F",1
"lib1","SARS-CoV-2","TTTAAGAGGTTAATAT",2,71.84,10.72,-0.05,0.05,2.86,1.07,0,">1 nonsynonymous","T3N V194A",2
"lib1","SARS-CoV-2","TTTAAGAGTGTGACAT",5,22.59,6,-4.76,2,3,1.19,0,">1 nonsynonymous","A18F D68W G146N A190S",4
"lib1","SARS-CoV-2","TTTAAGATCCACTTAA",3,52.93,10.49,-0.28,0.08,2.75,1.02,0,"1 nonsynonymous","E76A",1
"lib1","SARS-CoV-2","TTTAAGATCTGCAAAC",4,99.29,10.73,-0.03,0.07,2.93,1.06,0,"1 nonsynonymous","T3A",1
"lib1","SARS-CoV-2","TTTAAGCAAGGATATT",5,0,NA,NA,NA,NA,NA,NA,"stop","Y21* S147P C158F",3
"lib1","SARS-CoV-2","TTTAAGCCAACAGTCT",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F R27T F70A",3
"lib1","SARS-CoV-2","TTTAAGCCACAGACGA",2,34.74,10.25,-0.52,0.12,2.24,1,0.01,"1 nonsynonymous","E76T",1
"lib1","SARS-CoV-2","TTTAAGGAATATTTCG",3,15.24,6.38,-4.39,0.53,1.5,1.11,0.03,">1 nonsynonymous","P7N Y50P P82M G116V E135L",5
"lib1","SARS-CoV-2","TTTAAGGCACCTTCTG",1,19.78,7.97,-2.79,0.3,1.79,1.16,0.02,">1 nonsynonymous","K87G V181A",2
"lib1","SARS-CoV-2","TTTAAGGCATTTACAG",1,0.44,NA,NA,NA,NA,NA,NA,"stop","T148* G155V",2
"lib1","SARS-CoV-2","TTTAAGGCGTCTTTAC",6,16.21,9.61,-1.15,0.18,1.78,1.05,0.02,">1 nonsynonymous","N1F T15C D90R",3
"lib1","SARS-CoV-2","TTTAAGGGTTGATGCT",1,35.51,10.92,0.16,0.07,2.77,1.12,0,">1 nonsynonymous","L122S Q168A",2
"lib1","SARS-CoV-2","TTTAAGTACATGTGAT",6,0,NA,NA,NA,NA,NA,NA,"stop","N1* W23S V32* L38S K114* P197T",6
"lib1","SARS-CoV-2","TTTAAGTGAACCCTGT",9,103.2,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","G9R G152I C158F S184E",4
"lib1","SARS-CoV-2","TTTAAGTGAACGCCAG",1,34.02,10.87,0.11,0.09,2.93,1,0,"1 nonsynonymous","V173L",1
"lib1","SARS-CoV-2","TTTAAGTGAGGCACTT",3,18.05,10.35,-0.41,0.09,2.88,1.1,0.01,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","TTTAAGTGATAGAGAC",1,20.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","F99S G155V Y178S",3
"lib1","SARS-CoV-2","TTTAAGTGCTTAATGT",8,151.19,10.65,-0.12,0.04,2.94,1.02,0,"1 nonsynonymous","N120I",1
"lib1","SARS-CoV-2","TTTAAGTTTAATGTCA",3,28.91,8.73,-2.04,0.19,1.54,1.1,0.02,">1 nonsynonymous","T63R G83F A105W E141F",4
"lib1","SARS-CoV-2","TTTAAGTTTACGCAAC",4,108.8,10,-0.76,0.12,2.26,1.02,0.01,">1 nonsynonymous","R27P D90W T140E",3
"lib1","SARS-CoV-2","TTTAATAACAACGAGT",11,231.61,10.05,-0.71,0.04,2.89,1.03,0,">1 nonsynonymous","G9S N58H Y119R",3
"lib1","SARS-CoV-2","TTTAATAACACGTAGA",7,59.36,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","A42S T85R Y93N",3
"lib1","SARS-CoV-2","TTTAATAACCGCAAAA",10,2.45,NA,NA,NA,NA,NA,NA,"stop","T3N D34T L60* K114V P161R",5
"lib1","SARS-CoV-2","TTTAATAAGGGGAGGA",3,20.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103N L122Q G172N Y178F",4
"lib1","SARS-CoV-2","TTTAATAAGTCATCAC",1,15.76,6.09,-4.67,0.57,3,1.05,0.01,">1 nonsynonymous","E10C V103H T148N",3
"lib1","SARS-CoV-2","TTTAATACATTAAAAT",3,34.23,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28G F62V Y119A N157Y",4
"lib1","SARS-CoV-2","TTTAATACTCCTCTTC",2,33.29,10.67,-0.1,0.06,2.94,1.06,0,"1 nonsynonymous","D90S",1
"lib1","SARS-CoV-2","TTTAATAGACAAGGAC",11,124.81,8.45,-2.31,0.18,1.66,1.16,0.01,">1 nonsynonymous","K26G V37C K87S",3
"lib1","SARS-CoV-2","TTTAATAGACTTACAA",1,15.4,6,-4.76,2,3,1.19,0.02,">1 nonsynonymous","A42T L95G W106P I138N T201R",5
"lib1","SARS-CoV-2","TTTAATAGATCCGTAT",7,98.58,10.32,-0.45,0.06,2.82,1.03,0,"1 nonsynonymous","N40V",1
"lib1","SARS-CoV-2","TTTAATATAAACACTA",8,323.59,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","N4I L131A Y143H",3
"lib1","SARS-CoV-2","TTTAATATCAGCTTAC",2,14.5,7.64,-3.13,0.35,1.81,1.34,0.05,">1 nonsynonymous","S113R Q144R",2
"lib1","SARS-CoV-2","TTTAATATCTGCTCTG",18,5,NA,NA,NA,NA,NA,NA,"stop","T15* F99R L122I F156Y",4
"lib1","SARS-CoV-2","TTTAATATGCGCATGA",3,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S41Q I138T L162W",4
"lib1","SARS-CoV-2","TTTAATATTATGTTAT",1,23.68,10.27,-0.49,0.09,2.78,1,0,"1 nonsynonymous","S139I",1
"lib1","SARS-CoV-2","TTTAATCAACCCTCTA",13,3.2,NA,NA,NA,NA,NA,NA,"stop","N13R Y35V C61N G101* V180S",5
"lib1","SARS-CoV-2","TTTAATCATAAAGTAG",4,70.16,8.6,-2.16,0.09,2.78,1.04,0,"1 nonsynonymous","N157K",1
"lib1","SARS-CoV-2","TTTAATCATCAGACTG",8,75.53,10.67,-0.09,0.05,2.87,1.05,0,">1 nonsynonymous","A42V L122F",2
"lib1","SARS-CoV-2","TTTAATCATCCCACCT",5,31.74,7.01,-3.75,0.36,1.5,1.12,0.03,">1 nonsynonymous","A89G V115C T140Y Q163Y V173K",5
"lib1","SARS-CoV-2","TTTAATCATGTTGTAT",1,8.66,6,-4.76,2,3,1.01,0,">1 nonsynonymous","Y121G N151C C158V",3
"lib1","SARS-CoV-2","TTTAATCCCCTGATTG",4,75.77,6.06,-4.71,0.79,1.5,1.19,0.01,">1 nonsynonymous","G51N Y66E P82I I88L",4
"lib1","SARS-CoV-2","TTTAATCCTCCATTAG",1,9.72,6,-4.76,2,3,1.07,0,">1 nonsynonymous","C6L D90S S129L G174Y",4
"lib1","SARS-CoV-2","TTTAATCGCATACGGA",2,46.24,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","S147I G172Y T201N",3
"lib1","SARS-CoV-2","TTTAATCTAGCACACA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","L5* G83Y I104F Y121*",4
"lib1","SARS-CoV-2","TTTAATCTTAGGGCAC",3,28.42,10.54,-0.22,0.08,2.86,1.1,0,">1 nonsynonymous","L5E A42C",2
"lib1","SARS-CoV-2","TTTAATGAAATTAGAC",2,7.94,6,-4.76,2,1.5,1.32,0.07,">1 nonsynonymous","R16L K114M C150M",3
"lib1","SARS-CoV-2","TTTAATGCCATCAACA",3,94.41,10.72,-0.05,0.05,2.95,1.04,0,"1 nonsynonymous","K48T",1
"lib1","SARS-CoV-2","TTTAATGCTAAGGCTC",3,14.49,6.32,-4.45,0.78,1.5,1.16,0.04,">1 nonsynonymous","S19W K94Y Y123L N130F G155V",5
"lib1","SARS-CoV-2","TTTAATGGGGACAAGT",4,51.52,10.27,-0.5,0.07,2.61,1.04,0,">1 nonsynonymous","N1M N40S T46S D97A",4
"lib1","SARS-CoV-2","TTTAATGTCGACCACC",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K D97R",2
"lib1","SARS-CoV-2","TTTAATGTGATATTTT",2,27.32,10.34,-0.43,0.06,2.85,1.06,0,"1 nonsynonymous","R136S",1
"lib1","SARS-CoV-2","TTTAATTAACCGCAAT",4,120.38,9.85,-0.92,0.1,2.5,1.04,0,">1 nonsynonymous","V37E L122V L162T",3
"lib1","SARS-CoV-2","TTTAATTAAGCACAAT",4,31.99,10.3,-0.46,0.11,2.94,1,0.01,">1 nonsynonymous","F62S K87P A190L",3
"lib1","SARS-CoV-2","TTTAATTAATCTTTGA",6,58.35,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28Y I88F Y93C D98S T201W",5
"lib1","SARS-CoV-2","TTTAATTATGTAAGTA",3,1.46,NA,NA,NA,NA,NA,NA,"stop","G116* T140S",2
"lib1","SARS-CoV-2","TTTAATTCAACCACTT",2,6.18,6.87,-3.89,0.47,3,1.01,0.01,">1 nonsynonymous","W23L F99V K128N P149K",4
"lib1","SARS-CoV-2","TTTAATTGGGAAGAAT",4,30.82,8.35,-2.41,0.39,1.5,1.08,0.05,">1 nonsynonymous","C61K V77G",2
"lib1","SARS-CoV-2","TTTAATTGGGACATGT",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F C6S G117K T140R",4
"lib1","SARS-CoV-2","TTTACAAAACCATACT",7,172.63,10.48,-0.29,0.04,2.85,1.03,0,">1 nonsynonymous","A42N E141R",2
"lib1","SARS-CoV-2","TTTACAAAACCGATAG",1,11.48,9.42,-1.35,0.18,2.78,1.13,0.01,">1 nonsynonymous","T100R Q168L L188V",3
"lib1","SARS-CoV-2","TTTACAAAAGGACATA",1,0.85,NA,NA,NA,NA,NA,NA,"stop","C49V R124*",2
"lib1","SARS-CoV-2","TTTACAAATAGCATGC",6,52.3,8.75,-2.01,0.14,1.5,1.14,0.01,">1 nonsynonymous","L38C P54T E141K",3
"lib1","SARS-CoV-2","TTTACAACCAAAGCGG",6,139.47,10.74,-0.02,0.07,2.89,1.06,0,"1 nonsynonymous","Y35M",1
"lib1","SARS-CoV-2","TTTACAACGTACCCCA",2,43.75,10.69,-0.07,0.06,2.89,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACAACTGTGACGG",4,106.23,9.66,-1.1,0.12,2.39,1.12,0.01,">1 nonsynonymous","D97F Q176M",2
"lib1","SARS-CoV-2","TTTACAACTTGAATCT",4,22.64,6.9,-3.87,0.46,1.5,1.3,0.04,">1 nonsynonymous","G86M D98K",2
"lib1","SARS-CoV-2","TTTACAAGACACCAAC",8,46.76,6,-4.76,1.3,1.5,1.14,0.01,">1 nonsynonymous","V52T S69M C150S Y165L",4
"lib1","SARS-CoV-2","TTTACAAGAGGATAAA",7,48.04,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","G83P F99L W106S P169S",4
"lib1","SARS-CoV-2","TTTACAATAGGACATT",3,34.42,10.43,-0.33,0.04,2.94,1.04,0,"1 nonsynonymous","N120C",1
"lib1","SARS-CoV-2","TTTACACAATACGCCA",3,11.66,10.29,-0.47,0.12,2.57,1,0.01,">1 nonsynonymous","C61T V77M K128Y",3
"lib1","SARS-CoV-2","TTTACACATGACTTTA",8,84.34,10.82,0.05,0.07,2.83,1.11,0,"1 nonsynonymous","N130I",1
"lib1","SARS-CoV-2","TTTACACCCGACGATA",7,94.43,9.58,-1.18,0.16,1.86,1.13,0.01,"1 nonsynonymous","P82A",1
"lib1","SARS-CoV-2","TTTACACCTGATCTCA",2,7.77,7.01,-3.75,0.57,2.68,1.22,0.02,">1 nonsynonymous","D34R T46V K56H W106R L122P",5
"lib1","SARS-CoV-2","TTTACAGAAAATTGAC",3,85.28,10.57,-0.19,0.05,2.88,1.06,0,">1 nonsynonymous","C6F N171F",2
"lib1","SARS-CoV-2","TTTACAGAGCCCTACA",5,64.63,6,-4.76,1.31,1.5,1.14,0.01,">1 nonsynonymous","V20L I88T A105I L122M Y165C T170K",6
"lib1","SARS-CoV-2","TTTACAGGCTGCTTGA",6,1.95,NA,NA,NA,NA,NA,NA,"stop","I88R K114* Y121A V173R",4
"lib1","SARS-CoV-2","TTTACAGTCACGCCAT",1,6.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V E141M N151S",3
"lib1","SARS-CoV-2","TTTACAGTCCGACAGT",3,16.66,7.71,-3.06,0.4,1.5,1,0.06,">1 nonsynonymous","R127N Q144C G172L",3
"lib1","SARS-CoV-2","TTTACATAATATTTGT",11,4.67,NA,NA,NA,NA,NA,NA,"stop","G9* Y21Q Y39W T46E",4
"lib1","SARS-CoV-2","TTTACATACATCACTA",3,69.42,10.84,0.07,0.07,2.91,1.06,0,">1 nonsynonymous","T100V A190E",2
"lib1","SARS-CoV-2","TTTACATACCAACGAA",4,93.59,10.57,-0.19,0.04,2.92,1,0,">1 nonsynonymous","T15H N64T",2
"lib1","SARS-CoV-2","TTTACATACTGATAAA",1,7.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72R D90Y Y119K P149L P197S",5
"lib1","SARS-CoV-2","TTTACATACTGTAATG",2,28.72,8.21,-2.56,0.17,1.9,1.06,0.01,">1 nonsynonymous","N58T A67L G152Y G155P S200Y",5
"lib1","SARS-CoV-2","TTTACATATACAGAAT",7,307.46,10.49,-0.27,0.03,2.92,1.02,0,"1 nonsynonymous","N4L",1
"lib1","SARS-CoV-2","TTTACATATCCACGAA",2,12.29,6.21,-4.55,0.54,3,1.03,0.01,">1 nonsynonymous","V11G S19V A42F K56Y N151H N171I T201L",7
"lib1","SARS-CoV-2","TTTACATCACCACGCG",2,51.96,10.79,0.03,0.05,2.95,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACATCATCCAAAG",1,24.1,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","G9S F47Y N107I E135T K198Y",5
"lib1","SARS-CoV-2","TTTACATGATTTTAGT",3,148.51,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","T3D Y159S Y178T A190M",4
"lib1","SARS-CoV-2","TTTACATGCATATTAT",1,32.96,8.28,-2.48,0.32,1.5,1.16,0.04,">1 nonsynonymous","N24P L60N E141K T193N",4
"lib1","SARS-CoV-2","TTTACATGCCTCGAAT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","N118* R127T",2
"lib1","SARS-CoV-2","TTTACATGCTGACTCA",2,15.81,6,-4.76,2,1.5,1.11,0.02,">1 nonsynonymous","N4I K56T I88Y P96R A105E",5
"lib1","SARS-CoV-2","TTTACATTAACGCGAT",1,8.13,10.25,-0.51,0.19,2.34,1.1,0.02,">1 nonsynonymous","N13L A192E",2
"lib1","SARS-CoV-2","TTTACATTAGGATACA",3,49.93,10.14,-0.63,0.06,2.78,1.04,0,">1 nonsynonymous","G9S I28L C61W G116A N151L",5
"lib1","SARS-CoV-2","TTTACCAACTTGGAAT",1,65.54,10.78,0.02,0.06,2.92,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACCAAGACCAGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11H N130V G166S",3
"lib1","SARS-CoV-2","TTTACCAATCCAAGAC",2,107.42,6.83,-3.93,0.3,1.5,1.23,0.01,">1 nonsynonymous","D90N N107E Y119L",3
"lib1","SARS-CoV-2","TTTACCACAAATGCAA",1,11.68,6.05,-4.71,1.83,1.5,1.26,0.05,">1 nonsynonymous","A105D Q144K Y159S",3
"lib1","SARS-CoV-2","TTTACCACAGCCCCTT",13,115.68,10.13,-0.63,0.11,2.36,1.03,0,"1 nonsynonymous","V103T",1
"lib1","SARS-CoV-2","TTTACCACAGTTCTTC",1,17.82,10.19,-0.58,0.12,2.7,1,0.01,">1 nonsynonymous","P7V S41I G155Q",3
"lib1","SARS-CoV-2","TTTACCAGACAGTATA",2,5.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98V K132T E141L C158A P161L Y175I T201A",7
"lib1","SARS-CoV-2","TTTACCAGAGGGCGTA",2,11.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6R T63V Y119S K132N P149I",5
"lib1","SARS-CoV-2","TTTACCAGGGGGACAG",5,70.47,10.55,-0.21,0.03,2.94,1.02,0,">1 nonsynonymous","V37L D97L S164V",3
"lib1","SARS-CoV-2","TTTACCATCTAATTCT",2,63.13,6,-4.76,2,1.78,1.11,0.01,">1 nonsynonymous","F44G L60E W106R Y175P",4
"lib1","SARS-CoV-2","TTTACCATGAGCATCT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","F44* V77C N92C P169V",4
"lib1","SARS-CoV-2","TTTACCATGAGTGAAC",8,110.38,10.41,-0.35,0.06,2.89,1,0,">1 nonsynonymous","W106F S139T T201P",3
"lib1","SARS-CoV-2","TTTACCCAAAGGCCTA",3,19.31,6,-4.76,2,3,1.27,0.01,">1 nonsynonymous","N30K I88Y S139L V153K",4
"lib1","SARS-CoV-2","TTTACCCACACTCAAC",2,65.95,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V20T Y91T Y119F Y159M H189S",5
"lib1","SARS-CoV-2","TTTACCCAGTATTCTA",7,169.74,10.62,-0.15,0.03,2.9,1.02,0,">1 nonsynonymous","C61G P149R T201A",3
"lib1","SARS-CoV-2","TTTACCCATGTTAGAA",4,88.63,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","F8N Y165N",2
"lib1","SARS-CoV-2","TTTACCCCATAGACCT",2,28.99,7.92,-2.85,0.33,1.64,1.18,0.04,">1 nonsynonymous","G117I R136S",2
"lib1","SARS-CoV-2","TTTACCCCTATTAGTT",9,512.05,10.33,-0.44,0.04,2.8,1.04,0,">1 nonsynonymous","K48T P191W",2
"lib1","SARS-CoV-2","TTTACCCGACCAGACA",1,31.58,10.8,0.04,0.1,2.83,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACCCGCCGACTGA",3,16.06,10.76,-0.01,0.04,2.98,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACCCGTGTTATAT",3,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V Y39L D112W T148S",4
"lib1","SARS-CoV-2","TTTACCCGTTGATATT",2,9.49,6,-4.76,2,3,1.28,0.03,">1 nonsynonymous","G9Q I88Y L183S",3
"lib1","SARS-CoV-2","TTTACCGAAGCCGTTA",5,0,NA,NA,NA,NA,NA,NA,"stop","S41E F47L T63V K132Q C158S G172* V173I",7
"lib1","SARS-CoV-2","TTTACCGAGAGGAGTT",2,23.53,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","A105W Y123N T140N C158R",4
"lib1","SARS-CoV-2","TTTACCGCCCTCTAGT",1,5.78,6.74,-4.02,1.24,3,1.04,0.01,">1 nonsynonymous","F8R C49N F99Y Y143M",4
"lib1","SARS-CoV-2","TTTACCGCGCACAATC",1,40.08,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","V37E N92E E135K V173I",4
"lib1","SARS-CoV-2","TTTACCGCGGCGGCTA",3,122.47,10.7,-0.06,0.08,2.94,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTACCGGGTATAAAA",1,4.6,NA,NA,NA,NA,NA,NA,"stop","F17T Y119*",2
"lib1","SARS-CoV-2","TTTACCGTACTTTAGG",9,94.33,9.68,-1.09,0.11,1.93,1.16,0.01,">1 nonsynonymous","L38E S200R",2
"lib1","SARS-CoV-2","TTTACCTAATTTAGAC",2,49.01,10.49,-0.27,0.11,2.76,1,0,">1 nonsynonymous","N120V S139R",2
"lib1","SARS-CoV-2","TTTACCTATTATGATA",1,19.23,8.79,-1.98,0.14,2.73,1.07,0.01,">1 nonsynonymous","A14E N40T F126Y",3
"lib1","SARS-CoV-2","TTTACCTGACGTTTGC",4,49.26,9.93,-0.83,0.12,2.34,1.04,0.01,"1 nonsynonymous","A89G",1
"lib1","SARS-CoV-2","TTTACCTGATATACAT",8,117.8,6.15,-4.62,0.82,1.5,1.23,0.02,">1 nonsynonymous","V37F Q79P",2
"lib1","SARS-CoV-2","TTTACCTTATTATGAG",1,52.79,10.75,-0.01,0.07,2.88,1.05,0,"1 nonsynonymous","S139G",1
"lib1","SARS-CoV-2","TTTACGAACGTGAGTC",3,38.3,10.43,-0.33,0.04,2.93,1,0,">1 nonsynonymous","Y21H D97S",2
"lib1","SARS-CoV-2","TTTACGAATACTCACG",4,2.32,NA,NA,NA,NA,NA,NA,"stop","F12S P96* V103G D112F T201S",5
"lib1","SARS-CoV-2","TTTACGAATAGTGGTG",2,40.37,6,-4.76,2,1.5,1.26,0.04,">1 nonsynonymous","C61Y A81V T100K Y121W S200Y",5
"lib1","SARS-CoV-2","TTTACGACAATTACGG",1,95.99,10.04,-0.73,0.06,2.92,1,0,">1 nonsynonymous","F126I F160N",2
"lib1","SARS-CoV-2","TTTACGACGTCACAAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N1* T55S I80* K114T",4
"lib1","SARS-CoV-2","TTTACGACTACGGGGA",2,12.97,6,-4.76,2,3,1.03,0,">1 nonsynonymous","G9N V77K G83W R124A Y178L",5
"lib1","SARS-CoV-2","TTTACGACTCGGCGAG",4,54.31,9.24,-1.53,0.16,1.56,1.11,0.01,">1 nonsynonymous","W23A N30G",2
"lib1","SARS-CoV-2","TTTACGAGATAAGGCC",3,27.74,9.61,-1.15,0.2,1.73,1.22,0.01,">1 nonsynonymous","V11T F185I",2
"lib1","SARS-CoV-2","TTTACGATATGATTGG",3,71.42,10.21,-0.55,0.06,2.9,1.02,0,"1 nonsynonymous","Y119R",1
"lib1","SARS-CoV-2","TTTACGATGGCCACAC",3,113.32,10.67,-0.09,0.04,2.86,1.08,0,"1 nonsynonymous","Y178N",1
"lib1","SARS-CoV-2","TTTACGATTACGAAAA",5,65.65,10.74,-0.03,0.07,2.84,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACGCACAAGTAAT",2,17.1,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","I72S Y93E L111S",3
"lib1","SARS-CoV-2","TTTACGCGAAATTTTT",5,29.78,6,-4.76,2,3,1.07,0,">1 nonsynonymous","A33R N157D Q176V",3
"lib1","SARS-CoV-2","TTTACGCGATAAAGTT",3,77.19,10.7,-0.06,0.05,2.96,1.01,0,"1 nonsynonymous","C61D",1
"lib1","SARS-CoV-2","TTTACGCTGCCTTACA",1,66.38,10.7,-0.06,0.06,2.92,1.04,0,"1 nonsynonymous","F8L",1
"lib1","SARS-CoV-2","TTTACGGAACCTGCAT",2,19.42,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5T S36P V37L C61Q G86C G155W",6
"lib1","SARS-CoV-2","TTTACGGGAGTATAAG",5,41.88,7.11,-3.66,0.27,1.5,1.14,0.01,">1 nonsynonymous","N120L D137W V173M T201I",4
"lib1","SARS-CoV-2","TTTACGGTACCTAAAA",6,26.96,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","F17D K94R W106L L162S",4
"lib1","SARS-CoV-2","TTTACGTATAAAAAGC",1,13.57,9.14,-1.63,0.28,1.86,1.08,0.04,">1 nonsynonymous","F8T T100R P149R",3
"lib1","SARS-CoV-2","TTTACGTATAAGCAAA",2,26.04,7.33,-3.43,0.28,1.5,1.11,0.02,">1 nonsynonymous","D97I N107L G174P",3
"lib1","SARS-CoV-2","TTTACGTCAATTTTAC",3,10.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34N Y50D D98L I104Y K128V",5
"lib1","SARS-CoV-2","TTTACGTCAGATAAGT",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L S129N",2
"lib1","SARS-CoV-2","TTTACTAAAGTTTGAG",2,20.24,6,-4.76,1.37,3,1.08,0,">1 nonsynonymous","N1R Y119C F167I",3
"lib1","SARS-CoV-2","TTTACTACAACAGCAA",2,13.17,6,-4.76,2,1.5,1.07,0,">1 nonsynonymous","I28R Y159L Y175S",3
"lib1","SARS-CoV-2","TTTACTACACACATGA",1,9.14,10.62,-0.15,0.17,2.98,1.01,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTTACTAGAGCAATCA",4,3.47,NA,NA,NA,NA,NA,NA,"stop","V77* V173*",2
"lib1","SARS-CoV-2","TTTACTAGCAAAACCC",6,119.45,7.67,-3.09,0.23,1.52,1.15,0.02,">1 nonsynonymous","F62K I142G",2
"lib1","SARS-CoV-2","TTTACTAGTCAAACGC",1,13.06,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A67S I88C",2
"lib1","SARS-CoV-2","TTTACTATAAGCGAGA",4,46.03,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","N58R V180S",2
"lib1","SARS-CoV-2","TTTACTCAAGAAAGAG",2,27.84,10.55,-0.21,0.09,2.95,1,0,"1 nonsynonymous","F134R",1
"lib1","SARS-CoV-2","TTTACTCGAACGATTA",8,2.03,NA,NA,NA,NA,NA,NA,"stop","W106I R124V G155V V180*",4
"lib1","SARS-CoV-2","TTTACTCGTTGTAAAT",5,95.71,9.68,-1.08,0.07,2.67,1.06,0,">1 nonsynonymous","S45A R73T",2
"lib1","SARS-CoV-2","TTTACTCTAGATATAA",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30E A42I W106A T140L Y165T",5
"lib1","SARS-CoV-2","TTTACTGAAACAATGC",3,65.06,10.73,-0.03,0.04,2.9,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACTGCCGAACCTA",9,74.77,6,-4.76,2,3,1.16,0,">1 nonsynonymous","D59V L95Y",2
"lib1","SARS-CoV-2","TTTACTGTATTCAAAC",7,99.35,10.64,-0.12,0.08,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACTGTGCCGCATC",2,100.01,10.96,0.2,0.09,2.93,1.04,0,">1 nonsynonymous","N1K K87Y N171F",3
"lib1","SARS-CoV-2","TTTACTTACACGCGTA",6,209.89,9.19,-1.58,0.05,2.79,1.1,0,">1 nonsynonymous","R27V G146M",2
"lib1","SARS-CoV-2","TTTACTTAGAACGTCA",6,215.88,9.58,-1.18,0.11,2.35,1.06,0,">1 nonsynonymous","T63S Y121I K128C H189S",4
"lib1","SARS-CoV-2","TTTACTTCAAAGCCAC",1,44.5,10.73,-0.03,0.08,2.88,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTACTTTAAGAGCCA",5,86.52,10.06,-0.71,0.06,2.67,1.03,0,">1 nonsynonymous","F8L G83F K114A L131I L183F",5
"lib1","SARS-CoV-2","TTTACTTTATACCACC",5,41.17,6,-4.76,2,3,1.23,0,">1 nonsynonymous","C6I K56H Y66C Y119G",4
"lib1","SARS-CoV-2","TTTAGAAAACATACTG",4,68.93,10.68,-0.08,0.07,2.83,1.02,0,">1 nonsynonymous","N40R V153T",2
"lib1","SARS-CoV-2","TTTAGAAAATCTAGCT",3,30.27,6.73,-4.04,0.42,1.5,1.2,0.03,">1 nonsynonymous","K26G L60C D90M",3
"lib1","SARS-CoV-2","TTTAGAAACCTGATGT",10,2.28,NA,NA,NA,NA,NA,NA,"stop","N4* E154I",2
"lib1","SARS-CoV-2","TTTAGAAACTAATGGG",8,58.81,10.06,-0.7,0.07,2.37,1,0,">1 nonsynonymous","T3L E10M E141F",3
"lib1","SARS-CoV-2","TTTAGAAATAACGATA",2,14.09,6,-4.76,2,1.5,1.14,0.06,">1 nonsynonymous","N30E F62S W106R L131V V182H",5
"lib1","SARS-CoV-2","TTTAGAACAACGTGGC",2,24.06,8.05,-2.72,0.43,1.5,1.36,0.06,">1 nonsynonymous","R27S F47W C102F V173L",4
"lib1","SARS-CoV-2","TTTAGAACGACTACCG",3,86.1,10.74,-0.03,0.06,2.87,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAGAAGAACTTGTA",1,44.61,7.56,-3.2,0.36,1.5,1.18,0.06,">1 nonsynonymous","R16V V37R G86W N157T",4
"lib1","SARS-CoV-2","TTTAGAAGAATAGTAC",1,27.5,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R78V D112L I142G S200T",4
"lib1","SARS-CoV-2","TTTAGAAGGGTAAAAT",2,75.49,10.57,-0.2,0.05,2.96,1.01,0,"1 nonsynonymous","S184R",1
"lib1","SARS-CoV-2","TTTAGAAGGTGACAAC",7,64.81,10.14,-0.63,0.06,2.87,1.02,0,"1 nonsynonymous","Q79S",1
"lib1","SARS-CoV-2","TTTAGAATAAACATGA",10,164.59,10.62,-0.14,0.03,2.87,1.06,0,">1 nonsynonymous","T55R Q144A",2
"lib1","SARS-CoV-2","TTTAGAATAAAGGCCA",3,16.23,6.85,-3.91,0.49,1.5,1.16,0.03,">1 nonsynonymous","A67H F134R",2
"lib1","SARS-CoV-2","TTTAGAATGCCATTGT",2,44.93,7.09,-3.67,0.37,1.5,1.15,0.03,">1 nonsynonymous","C6G A18C S129W",3
"lib1","SARS-CoV-2","TTTAGACAAACCGCGA",5,220.5,9.28,-1.49,0.08,2.43,1.11,0,">1 nonsynonymous","N24R Q176R",2
"lib1","SARS-CoV-2","TTTAGACAATTTGACA",5,93.23,6,-4.76,0.86,1.5,1.14,0.01,">1 nonsynonymous","I2F G9T N40D D98F Q176L",5
"lib1","SARS-CoV-2","TTTAGACACACGCATA",1,21.16,11.02,0.25,0.11,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAGACACGAAATCA",2,22.69,10.63,-0.13,0.06,2.87,1.1,0,">1 nonsynonymous","K56E L95V",2
"lib1","SARS-CoV-2","TTTAGACACTACACTA",6,22.16,7.98,-2.79,0.31,1.5,1.09,0.03,">1 nonsynonymous","A42T A81L G152Y",3
"lib1","SARS-CoV-2","TTTAGACAGAACAAAG",1,83.71,9.28,-1.49,0.07,2.82,1.1,0,">1 nonsynonymous","F62V N120P",2
"lib1","SARS-CoV-2","TTTAGACCTGATATTA",3,218.61,9.83,-0.94,0.07,2.61,1.07,0,">1 nonsynonymous","F62Q P149C H189P C195T",4
"lib1","SARS-CoV-2","TTTAGACGACCATGTT",12,232.98,10.12,-0.64,0.05,2.85,1.04,0,"1 nonsynonymous","F44C",1
"lib1","SARS-CoV-2","TTTAGACGCATTGGAT",1,37.05,8.8,-1.96,0.07,2.71,1.05,0,">1 nonsynonymous","T3V T46R K56T Y119T",4
"lib1","SARS-CoV-2","TTTAGACGGCATACCA",11,40.72,9.37,-1.4,0.15,1.79,1.05,0.01,"1 nonsynonymous","R127Q",1
"lib1","SARS-CoV-2","TTTAGACTAAATCCAC",7,103.42,10.65,-0.11,0.04,2.95,1.03,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","TTTAGAGATACATCCC",2,107.9,10.29,-0.47,0.05,2.95,1,0,">1 nonsynonymous","K56H T63R D90M F156P",4
"lib1","SARS-CoV-2","TTTAGAGGCTAAACCA",1,74.77,9.99,-0.77,0.11,2.65,1.02,0,"1 nonsynonymous","C6K",1
"lib1","SARS-CoV-2","TTTAGAGTGGGCCGGA",8,96.07,6,-4.76,2,3,1.2,0,"1 nonsynonymous","N92L",1
"lib1","SARS-CoV-2","TTTAGATAAACAACTA",2,30.8,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","I2Y W23G F47L Y121P N151Y V173S L183N",7
"lib1","SARS-CoV-2","TTTAGATATGACAGAG",2,118.02,10.74,-0.03,0.06,2.91,1.05,0,"1 nonsynonymous","T201K",1
"lib1","SARS-CoV-2","TTTAGATGCCCACATC",4,39.04,7.1,-3.67,0.44,1.5,1.16,0.04,">1 nonsynonymous","T15K V71E Y119W",3
"lib1","SARS-CoV-2","TTTAGATGTCGCACTG",6,12.98,NA,NA,NA,NA,NA,NA,"stop","V37* N151S F156P",3
"lib1","SARS-CoV-2","TTTAGATGTCTTTAAC",6,43.67,6,-4.76,0.85,1.5,1.11,0,">1 nonsynonymous","R16S G86K W106R S139R P149D F167C",6
"lib1","SARS-CoV-2","TTTAGATTCCAAAAGT",2,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I A105P T148D",3
"lib1","SARS-CoV-2","TTTAGATTGCATGCAA",9,66.34,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","G9H K26E S36D W106S I138R N157F",6
"lib1","SARS-CoV-2","TTTAGCACTTACATGA",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86H W106L",2
"lib1","SARS-CoV-2","TTTAGCAGATTGAACG",3,76.54,10.56,-0.21,0.06,2.84,1.06,0,">1 nonsynonymous","L5V A42N",2
"lib1","SARS-CoV-2","TTTAGCAGCAGCGCAG",1,74.5,10.73,-0.03,0.05,2.9,1.03,0,"1 nonsynonymous","N110I",1
"lib1","SARS-CoV-2","TTTAGCATCAATTTAA",2,8.3,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","G9L N64Y G86R S184T",4
"lib1","SARS-CoV-2","TTTAGCCAAGAATCGA",5,59.79,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","N24T G86E P161I",3
"lib1","SARS-CoV-2","TTTAGCCACACTTGCT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M T85L S139F P169I",4
"lib1","SARS-CoV-2","TTTAGCCAGATTTTCT",7,83.73,10.71,-0.06,0.03,2.95,1.02,0,"1 nonsynonymous","S200Y",1
"lib1","SARS-CoV-2","TTTAGCCTAATCAGAA",4,78.39,10.63,-0.13,0.07,2.86,1.08,0,"1 nonsynonymous","Y66L",1
"lib1","SARS-CoV-2","TTTAGCCTGCAATAGT",1,8.39,6.6,-4.17,0.22,1.55,1.01,0.01,">1 nonsynonymous","C49H D90H P161N Y175M",4
"lib1","SARS-CoV-2","TTTAGCGAAATAAAAT",1,31.58,8.22,-2.55,0.22,1.99,1.1,0.02,">1 nonsynonymous","A42S Y175M",2
"lib1","SARS-CoV-2","TTTAGCGATAAGTACC",4,35.56,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","L5K F12K D68M Q84K F126A Y165K T170S",7
"lib1","SARS-CoV-2","TTTAGCGATATTAAAG",5,79.48,10.55,-0.21,0.05,2.92,1.05,0,">1 nonsynonymous","E10S L122Y",2
"lib1","SARS-CoV-2","TTTAGCTAAGAATTAT",6,1.34,NA,NA,NA,NA,NA,NA,"stop","Y35V C61* D68R Y91S V103D L131Y Y165N R179W",8
"lib1","SARS-CoV-2","TTTAGCTGCCTGAACT",4,20.61,6,-4.76,2,3,1.24,0.02,">1 nonsynonymous","G51T N107H T170F",3
"lib1","SARS-CoV-2","TTTAGCTTGACCTCCA",4,103.31,10.75,-0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAGGAATTATTCCA",2,49.35,9.74,-1.02,0.08,2.58,1.05,0,">1 nonsynonymous","S41T P96T V115T L122W",4
"lib1","SARS-CoV-2","TTTAGGACGTCCGAAA",4,24.16,7.09,-3.68,0.17,1.5,1.12,0.01,">1 nonsynonymous","R27V G86W",2
"lib1","SARS-CoV-2","TTTAGGAGAAGGTGTA",3,33.05,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6S V77A Y119C G174V",4
"lib1","SARS-CoV-2","TTTAGGATAGAACCCA",5,45.4,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P96S A105M S113P",3
"lib1","SARS-CoV-2","TTTAGGATATACGCCG",1,11.78,10.87,0.11,0.09,2.96,1,0,">1 nonsynonymous","Y39G L122V",2
"lib1","SARS-CoV-2","TTTAGGCCAGAGAACA",3,100.73,10.12,-0.65,0.04,2.92,1,0,"1 nonsynonymous","Q168T",1
"lib1","SARS-CoV-2","TTTAGGCCAGCTTCCA",1,31.56,10.86,0.09,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAGGCCCGTTAACC",2,21.33,10.85,0.09,0.11,2.84,1.05,0,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","TTTAGGCGGAGCAACA",10,121.89,10.27,-0.5,0.04,2.84,1,0,">1 nonsynonymous","A105T N130G",2
"lib1","SARS-CoV-2","TTTAGGCTCCCTTCTA",14,244.41,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","F12M D59K Y93L N107S F126N N151T",6
"lib1","SARS-CoV-2","TTTAGGCTTTACCAGC",2,45.5,6.44,-4.33,0.56,1.5,1.24,0.03,">1 nonsynonymous","G101I K128A K132S N151S P197Q",5
"lib1","SARS-CoV-2","TTTAGGGAGCGTTACC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C6F K48* G74* G83A F134Y",5
"lib1","SARS-CoV-2","TTTAGGGGCTGTTACG",4,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V P96Y I104A S139G T148H",5
"lib1","SARS-CoV-2","TTTAGGGTCTAATAAC",1,10.73,10.29,-0.48,0.06,2.96,1.03,0,">1 nonsynonymous","T170A T201R",2
"lib1","SARS-CoV-2","TTTAGGGTTCAGTACG",5,77.84,10.39,-0.38,0.05,2.87,1.05,0,">1 nonsynonymous","T46R A190Y",2
"lib1","SARS-CoV-2","TTTAGGTAACACTTTA",2,83.93,6,-4.76,2,3,1.1,0,">1 nonsynonymous","S41M I142N Y165N Q176G",4
"lib1","SARS-CoV-2","TTTAGGTCGACACGTT",18,147.74,8.38,-2.38,0.15,1.5,1.06,0.01,">1 nonsynonymous","A14I Y121S",2
"lib1","SARS-CoV-2","TTTAGGTTCGATAAAT",1,6.91,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y35H P54F I88N W106M S129D P149T E154Q",7
"lib1","SARS-CoV-2","TTTAGGTTGCCATTCT",3,32.82,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","T3L P7A D34E Y35E Y50H G101M I138T Q163V",8
"lib1","SARS-CoV-2","TTTAGTAAAACAGATC",5,19.23,8.71,-2.06,0.25,1.5,1.12,0.03,"1 nonsynonymous","S19F",1
"lib1","SARS-CoV-2","TTTAGTAAAACGAGAG",8,76.01,6.48,-4.29,0.38,1.5,1.14,0.01,">1 nonsynonymous","T85K K94W F134A",3
"lib1","SARS-CoV-2","TTTAGTAAAGACATCT",4,34.3,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","Q79V L95C I104Y L122S",4
"lib1","SARS-CoV-2","TTTAGTAAAGTACAAC",9,28.93,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3K S36D F62N V103L",4
"lib1","SARS-CoV-2","TTTAGTAAAGTGTCAA",1,0.8,NA,NA,NA,NA,NA,NA,"stop","A14* G86K F160G Q168K",4
"lib1","SARS-CoV-2","TTTAGTAACTTAATAG",1,25.49,10.52,-0.24,0.1,2.97,1.04,0.01,"1 nonsynonymous","T148E",1
"lib1","SARS-CoV-2","TTTAGTACAGTACATC",7,80.22,10.73,-0.04,0.05,2.89,1.06,0,"1 nonsynonymous","S139A",1
"lib1","SARS-CoV-2","TTTAGTAGGCTAAAAA",4,21.72,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C6Y S29A C49H",3
"lib1","SARS-CoV-2","TTTAGTATAGCACCGA",2,9.95,10.76,0,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTAGTCACGTAAAAA",3,32.93,10.41,-0.35,0.06,2.9,1.08,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","TTTAGTCAGTATAACA",3,48.02,10.31,-0.46,0.04,2.88,1.02,0,"1 nonsynonymous","D34S",1
"lib1","SARS-CoV-2","TTTAGTCATACCTTCT",1,17.01,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","R16Q L60F V103N",3
"lib1","SARS-CoV-2","TTTAGTCCGGTGCACA",2,15.35,9.01,-1.75,0.08,2.91,1.08,0,">1 nonsynonymous","N157G S184L",2
"lib1","SARS-CoV-2","TTTAGTCCTCAAGACC",8,119.55,8.61,-2.16,0.21,1.51,1.19,0.01,">1 nonsynonymous","F99V P149H T170S",3
"lib1","SARS-CoV-2","TTTAGTCTCTAATTCT",12,53.5,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P96Y Y121S F160Y Y165M",4
"lib1","SARS-CoV-2","TTTAGTGAACTCCTTC",7,35.16,6,-4.76,1.57,1.5,1.24,0.03,">1 nonsynonymous","I2V N40F D90L D98Y C102F",5
"lib1","SARS-CoV-2","TTTAGTGGCACACAGG",1,16.18,8.68,-2.09,0.16,2.42,1.11,0.01,">1 nonsynonymous","T3F N64L G117T S200M",4
"lib1","SARS-CoV-2","TTTAGTGGTGCCGATA",2,17.52,9.71,-1.06,0.15,2.3,1.11,0.01,">1 nonsynonymous","F44D N107R",2
"lib1","SARS-CoV-2","TTTAGTGTGAACCATA",2,9.63,6.85,-3.91,0.69,1.66,1.2,0.07,">1 nonsynonymous","D34C L95K Y165I",3
"lib1","SARS-CoV-2","TTTATAAAAGCGAGAA",2,23.21,10.65,-0.12,0.1,2.88,1,0,">1 nonsynonymous","D98V Q144A",2
"lib1","SARS-CoV-2","TTTATAAAGAATTTCA",5,26.74,6.04,-4.72,1.55,1.5,1.11,0.07,">1 nonsynonymous","K26I V52S I88T I138Y F160R",5
"lib1","SARS-CoV-2","TTTATAAAGCACTATT",5,80.6,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","P133R P177H",2
"lib1","SARS-CoV-2","TTTATAACAAAATGTG",2,71.01,10.29,-0.47,0.06,2.95,1,0,"1 nonsynonymous","C6D",1
"lib1","SARS-CoV-2","TTTATAACGTACCACA",1,39.97,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","V37R D68V G146A Y178N",4
"lib1","SARS-CoV-2","TTTATAACTTGCAGAA",1,15.54,10.23,-0.53,0.07,2.1,1,0,">1 nonsynonymous","F62L G83S D97F N120A",4
"lib1","SARS-CoV-2","TTTATAAGGCCAATAC",2,16.12,10.49,-0.28,0.1,2.79,1.12,0.01,">1 nonsynonymous","T3Q G116D",2
"lib1","SARS-CoV-2","TTTATAATAGAACACT",1,29.63,10.07,-0.69,0.06,2.9,1.05,0,">1 nonsynonymous","T100Q G174W",2
"lib1","SARS-CoV-2","TTTATAATCATTAAGA",5,77.64,10.6,-0.17,0.04,2.87,1.06,0,"1 nonsynonymous","S41F",1
"lib1","SARS-CoV-2","TTTATAATCCCGCAAA",5,53.65,8.71,-2.06,0.19,1.79,1.18,0.01,"1 nonsynonymous","R127T",1
"lib1","SARS-CoV-2","TTTATAATCTAAGTTT",2,1.64,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTTATAATTGAGCGGG",14,53.22,6,-4.76,1.35,1.5,1.16,0.03,">1 nonsynonymous","C6V V32M T100L A105N I138Y",5
"lib1","SARS-CoV-2","TTTATAATTTACAAAG",2,22,10.76,-0.01,0.05,2.9,1.03,0,">1 nonsynonymous","T46F L60Y",2
"lib1","SARS-CoV-2","TTTATACAAATAGAAT",3,58.5,10.63,-0.13,0.08,2.88,1.1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATACAAGAAACCA",6,137.38,10.68,-0.08,0.04,2.91,1.06,0,"1 nonsynonymous","F160V",1
"lib1","SARS-CoV-2","TTTATACAATTCACCC",3,136.29,9.22,-1.54,0.07,2.85,1.11,0,"1 nonsynonymous","Y119D",1
"lib1","SARS-CoV-2","TTTATACAGACAGAAA",2,6.31,6,-4.76,2,1.5,1.05,0.05,">1 nonsynonymous","C102S P191H",2
"lib1","SARS-CoV-2","TTTATACAGACTGCGT",10,196.57,8.5,-2.26,0.1,2.33,1.13,0,">1 nonsynonymous","F44W Y119E R136A",3
"lib1","SARS-CoV-2","TTTATACAGCGTTATA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N40F N64Y Q84*",3
"lib1","SARS-CoV-2","TTTATACATAAGCTGA",1,39.3,6.98,-3.78,0.37,1.5,1.1,0.03,">1 nonsynonymous","Y123R L162Y V194W",3
"lib1","SARS-CoV-2","TTTATACATCAAGAAT",2,6.1,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","T63L G86R",2
"lib1","SARS-CoV-2","TTTATACATTGCCGTG",7,85.04,8.32,-2.44,0.24,1.82,1.15,0.02,">1 nonsynonymous","S41L N130L G146V",3
"lib1","SARS-CoV-2","TTTATACCATATACCG",8,82.04,10.18,-0.59,0.08,2.52,1,0,"1 nonsynonymous","W106K",1
"lib1","SARS-CoV-2","TTTATACCCGATACAT",2,121.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2G F8I N107T Y123T N130C",5
"lib1","SARS-CoV-2","TTTATACCCTAACCCA",3,7.4,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","F99S W106C S113H",3
"lib1","SARS-CoV-2","TTTATACCGCGGAACT",3,55,10.72,-0.04,0.05,2.91,1.04,0,">1 nonsynonymous","D97V S200Y",2
"lib1","SARS-CoV-2","TTTATACGAAAGTTTA",4,17.87,10.69,-0.07,0.09,2.82,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATACGGGTCACTA",3,60.04,10.61,-0.16,0.08,2.8,1.09,0,"1 nonsynonymous","K56Y",1
"lib1","SARS-CoV-2","TTTATACGTAGAGGTT",4,63.78,10.03,-0.73,0.05,2.87,1,0,">1 nonsynonymous","G9S G146N",2
"lib1","SARS-CoV-2","TTTATACGTGCCACCA",2,33.64,9.97,-0.79,0.06,2.94,1.05,0,">1 nonsynonymous","N151T F156M",2
"lib1","SARS-CoV-2","TTTATACTGTGCATTG",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E L38M K114L S139L",4
"lib1","SARS-CoV-2","TTTATAGAATATAATC",4,0.33,NA,NA,NA,NA,NA,NA,"stop","F44* Y119L F134T",3
"lib1","SARS-CoV-2","TTTATAGACACAACTG",10,1.27,NA,NA,NA,NA,NA,NA,"stop","R16A D90F Y121* N130Q P149Y T201S",6
"lib1","SARS-CoV-2","TTTATAGACACCAACC",3,54.13,10.41,-0.35,0.11,2.61,1.08,0,">1 nonsynonymous","F8L A33K",2
"lib1","SARS-CoV-2","TTTATAGACCCCAGTC",6,59.79,10.73,-0.04,0.06,2.94,1.02,0,"1 nonsynonymous","N58H",1
"lib1","SARS-CoV-2","TTTATAGATAAATTAT",2,43.24,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N92P N107G A145Y T170C P177N",5
"lib1","SARS-CoV-2","TTTATAGATTTAAATT",1,7.6,6,-4.76,2,1.5,1.27,0.06,">1 nonsynonymous","N13Y Y39F N107D F134V G146R",5
"lib1","SARS-CoV-2","TTTATAGCATAAAAAG",1,6.57,6,-4.76,2,1.97,1.03,0,">1 nonsynonymous","P82R Y119M Q163S",3
"lib1","SARS-CoV-2","TTTATAGCGCTATAAT",8,26.39,6,-4.76,2,1.5,1.35,0.03,">1 nonsynonymous","N13Q V37L N118C P133R",4
"lib1","SARS-CoV-2","TTTATAGGCTGACCAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","A14R A42* I72L Y159V G166R",5
"lib1","SARS-CoV-2","TTTATAGTATTCCGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91M P149*",2
"lib1","SARS-CoV-2","TTTATATAAGAGTTTG",9,136.83,10.19,-0.57,0.06,2.73,1,0,"1 nonsynonymous","V52N",1
"lib1","SARS-CoV-2","TTTATATAATTCAATA",1,22.18,10.65,-0.12,0.14,2.71,1.05,0.01,"1 nonsynonymous","K87W",1
"lib1","SARS-CoV-2","TTTATATACTGCTTTA",2,27.56,10.77,0,0.04,2.99,1.01,0,">1 nonsynonymous","V37T I138V",2
"lib1","SARS-CoV-2","TTTATATATCGATGCT",1,32.6,9,-1.77,0.08,2.85,1.1,0,"1 nonsynonymous","T170V",1
"lib1","SARS-CoV-2","TTTATATGGCACCCGG",3,29.56,10.47,-0.29,0.08,2.93,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATATGGGTCGAAC",1,38.91,6.11,-4.66,0.97,1.5,1.1,0.03,">1 nonsynonymous","A14V C49S Y123G",3
"lib1","SARS-CoV-2","TTTATATTAATCAGCT",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V Y50I V77G D90Y F160P T170M",6
"lib1","SARS-CoV-2","TTTATATTCACGTAAC",1,41.83,10.76,0,0.06,2.91,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATATTGGATTGAA",5,85.13,10.78,0.02,0.04,2.9,1.05,0,"1 nonsynonymous","T201A",1
"lib1","SARS-CoV-2","TTTATCAAAAGCTACG",3,113.73,9.65,-1.11,0.07,2.63,1.08,0,">1 nonsynonymous","Y121M G155A P197D",3
"lib1","SARS-CoV-2","TTTATCAACGAAGACT",3,50.71,10.55,-0.22,0.05,2.92,1.02,0,">1 nonsynonymous","D98L F160S",2
"lib1","SARS-CoV-2","TTTATCAATCCGTTCC",5,34.79,6,-4.76,2,1.5,1.19,0.04,">1 nonsynonymous","W23S K56E A81N F99D P177I",5
"lib1","SARS-CoV-2","TTTATCAATGGAGACA",8,256.44,6,-4.76,2,1.5,1.16,0,">1 nonsynonymous","K26W N58Y Y91N Y143G",4
"lib1","SARS-CoV-2","TTTATCATCTTCCGCA",2,29.33,9.88,-0.89,0.08,2.6,1.06,0,"1 nonsynonymous","V71A",1
"lib1","SARS-CoV-2","TTTATCATGCGCCCCC",6,65.03,10.66,-0.1,0.05,2.89,1.07,0,">1 nonsynonymous","K56S Y66L",2
"lib1","SARS-CoV-2","TTTATCATGCTTAAAA",4,52.58,10.59,-0.18,0.04,2.93,1.02,0,"1 nonsynonymous","Q84L",1
"lib1","SARS-CoV-2","TTTATCCACACTAAGA",1,13.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y93H A105F G166H",3
"lib1","SARS-CoV-2","TTTATCCAGAAGCAGC",3,41.86,9.29,-1.48,0.12,2.16,1.09,0.01,">1 nonsynonymous","F156R V181L",2
"lib1","SARS-CoV-2","TTTATCCGCACCGAAT",1,123.4,8.33,-2.43,0.18,2.09,1.1,0.01,">1 nonsynonymous","G9P V37M D97K N118T N151D G174L",6
"lib1","SARS-CoV-2","TTTATCCGCAGCCTAG",3,1.01,NA,NA,NA,NA,NA,NA,"stop","L95* S108Y Y121E",3
"lib1","SARS-CoV-2","TTTATCCTGTGCCGAG",2,12.83,10.62,-0.15,0.09,2.81,1.08,0.01,">1 nonsynonymous","N64K K128V",2
"lib1","SARS-CoV-2","TTTATCGAACTCAGGT",1,37.18,10.69,-0.07,0.09,2.82,1.17,0,">1 nonsynonymous","T55D T148K",2
"lib1","SARS-CoV-2","TTTATCGACTGATAAC",2,79.82,10.47,-0.29,0.28,1.5,1,0.04,">1 nonsynonymous","A42R R73G V77H V173T",4
"lib1","SARS-CoV-2","TTTATCGATTATCGAT",1,16.83,6,-4.76,2,3,1.12,0.01,">1 nonsynonymous","F44L L57E G74Q R127T A190L",5
"lib1","SARS-CoV-2","TTTATCGCCCTAGAAC",9,143.78,10.74,-0.03,0.05,2.93,1.04,0,">1 nonsynonymous","D98N K199I",2
"lib1","SARS-CoV-2","TTTATCGCTCACAATA",5,258.13,10.36,-0.4,0.03,2.83,1.06,0,">1 nonsynonymous","G83F L95M",2
"lib1","SARS-CoV-2","TTTATCGGTCTTCAAC",1,113.32,9.37,-1.39,0.1,2.68,1.11,0,">1 nonsynonymous","G9Y K56R G146Q",3
"lib1","SARS-CoV-2","TTTATCGTTACGTCTC",2,6.26,9,-1.76,0.21,1.86,1.23,0.02,">1 nonsynonymous","G9V F47V Q84K S139C",4
"lib1","SARS-CoV-2","TTTATCTCAATTGCCG",3,62.21,8.92,-1.84,0.07,2.49,1.07,0,"1 nonsynonymous","N107H",1
"lib1","SARS-CoV-2","TTTATCTCATAATAAT",4,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S F70Y I88W Y165R",4
"lib1","SARS-CoV-2","TTTATCTGAGGTTATC",2,26.32,10.78,0.01,0.08,2.92,1.05,0,">1 nonsynonymous","Q84E S164R",2
"lib1","SARS-CoV-2","TTTATCTGCTCACATG",14,346.97,9.69,-1.07,0.03,2.9,1.02,0,">1 nonsynonymous","N120S Y143I P197T",3
"lib1","SARS-CoV-2","TTTATCTGCTTCATAC",1,0.4,NA,NA,NA,NA,NA,NA,"stop","N40D K56G D97* L122S",4
"lib1","SARS-CoV-2","TTTATCTTCACGATAT",3,11.89,7.13,-3.63,0.57,1.5,1.3,0.06,">1 nonsynonymous","V103K E141P",2
"lib1","SARS-CoV-2","TTTATGAAAAAACAGT",2,0.87,NA,NA,NA,NA,NA,NA,"stop","N4K A14* K114R F126V N157S Y165L",6
"lib1","SARS-CoV-2","TTTATGAAAAGCACTA",3,31.2,10.73,-0.03,0.09,2.97,1.03,0,">1 nonsynonymous","L122M T201V",2
"lib1","SARS-CoV-2","TTTATGACCAAGTACG",1,5.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W Y143P",2
"lib1","SARS-CoV-2","TTTATGACCCCTAGGA",6,33.75,9.95,-0.81,0.09,2.25,1.03,0,">1 nonsynonymous","F12V R78L",2
"lib1","SARS-CoV-2","TTTATGACCCGAAAAT",1,7.41,6,-4.76,2,3,1.2,0.01,">1 nonsynonymous","S139P V173S",2
"lib1","SARS-CoV-2","TTTATGACTTACATCT",3,32.43,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","T3E Y39S P96W",3
"lib1","SARS-CoV-2","TTTATGACTTGCGCCC",1,10.87,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G83V R124M N151M F167M",4
"lib1","SARS-CoV-2","TTTATGAGAACATTTC",2,40.62,10.74,-0.03,0.09,2.92,1.07,0,">1 nonsynonymous","V37S T201R",2
"lib1","SARS-CoV-2","TTTATGATCCACGAAG",1,37.3,8.66,-2.1,0.15,1.71,1.11,0.01,">1 nonsynonymous","N64G D112L",2
"lib1","SARS-CoV-2","TTTATGATGGACTCTG",6,9.46,6,-4.76,2,1.5,1.13,0.03,">1 nonsynonymous","T148D L162R A190F",3
"lib1","SARS-CoV-2","TTTATGCAAAAAACCA",1,12.76,10.81,0.04,0.09,3,1.02,0,"1 nonsynonymous","R27V",1
"lib1","SARS-CoV-2","TTTATGCACAAAATTC",5,67.97,10.65,-0.11,0.06,2.88,1.11,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATGCCGATGTAGC",5,41.2,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","P7L L38G Y66A G86W",4
"lib1","SARS-CoV-2","TTTATGCCTAAGCACG",2,27.47,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","T63F N92K",2
"lib1","SARS-CoV-2","TTTATGGAAAAGAATC",1,2.49,NA,NA,NA,NA,NA,NA,"stop","W106L Y119C Y143* T201K",4
"lib1","SARS-CoV-2","TTTATGGCATCTCATA",1,8.83,6.08,-4.69,1.17,1.5,1.29,0.03,">1 nonsynonymous","N13F Y35Q T55S P133S",4
"lib1","SARS-CoV-2","TTTATGGGAAACAGTA",3,1.62,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib1","SARS-CoV-2","TTTATGGGACCCTACA",1,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E N64R D68M P96R D137T",5
"lib1","SARS-CoV-2","TTTATGGGAGAGTTAG",3,22.41,8.76,-2,0.2,1.83,1.16,0.02,">1 nonsynonymous","T15L P96T",2
"lib1","SARS-CoV-2","TTTATGGTCATACGGC",5,185.64,8.3,-2.46,0.13,2.06,1.09,0.01,"1 nonsynonymous","D112M",1
"lib1","SARS-CoV-2","TTTATGTAAAATAAAG",7,50.23,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","Y39V K56L D112L R127N",4
"lib1","SARS-CoV-2","TTTATGTCCTAGCAAT",3,36.14,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6Y G86R N92D",3
"lib1","SARS-CoV-2","TTTATGTCCTTTTGCT",3,13.9,9.46,-1.3,0.3,1.5,1.23,0.04,"1 nonsynonymous","F185R",1
"lib1","SARS-CoV-2","TTTATGTCTAACGCAA",3,27.27,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","G9P A22D L57Y L95M S113R",5
"lib1","SARS-CoV-2","TTTATGTGCATAGTTT",10,54.16,6,-4.76,2,1.65,1.17,0.01,">1 nonsynonymous","S45W A105P",2
"lib1","SARS-CoV-2","TTTATTAAACCGGGCA",7,2.69,NA,NA,NA,NA,NA,NA,"stop","W23K T63L A89* P96T Q176S",5
"lib1","SARS-CoV-2","TTTATTAACACTAACT",3,11.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2C A105P",2
"lib1","SARS-CoV-2","TTTATTAACATAACAA",9,82.36,8.43,-2.33,0.28,1.5,1.07,0.03,">1 nonsynonymous","P82Q Y123K",2
"lib1","SARS-CoV-2","TTTATTAACTCTTGGT",5,17.98,6,-4.76,2,1.5,1.29,0.02,">1 nonsynonymous","A18D K56V T85V K128I L183P",5
"lib1","SARS-CoV-2","TTTATTACAACAGAGA",3,28.15,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","T55Q V71K W106K",3
"lib1","SARS-CoV-2","TTTATTACAGGACTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y P149I P169C",3
"lib1","SARS-CoV-2","TTTATTACAGGCATTC",3,21.65,6,-4.76,2,1.5,1.29,0.05,">1 nonsynonymous","R73W S113P S139T E154Y",4
"lib1","SARS-CoV-2","TTTATTAGCTTGAAAT",2,32.31,10.04,-0.72,0.16,2.25,1.01,0.01,">1 nonsynonymous","N1F Q84R S139A G174S",4
"lib1","SARS-CoV-2","TTTATTAGTAAGATAT",3,58.42,10.22,-0.55,0.07,2.85,1.01,0,">1 nonsynonymous","T63W N171Q",2
"lib1","SARS-CoV-2","TTTATTATCAGACACC",1,11.03,6,-4.76,2,3,1.12,0,">1 nonsynonymous","T15L F99V Y175S V180K H189Q",5
"lib1","SARS-CoV-2","TTTATTCACACCTTGT",4,72.05,10.67,-0.1,0.07,2.91,1.02,0,">1 nonsynonymous","S41P N64T K198S",3
"lib1","SARS-CoV-2","TTTATTCACATTTGGG",3,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y A105K L125S",3
"lib1","SARS-CoV-2","TTTATTCAGGTCATTT",1,11.84,9.97,-0.8,0.12,2.55,1.07,0.01,">1 nonsynonymous","G83F N107A",2
"lib1","SARS-CoV-2","TTTATTCCCGCGTACG",10,87.59,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","V103F L122F K128W",3
"lib1","SARS-CoV-2","TTTATTCCGAGTACAG",2,8.18,6,-4.76,2,1.5,1.18,0.06,">1 nonsynonymous","V11A G86P Y93C A105F L188V",5
"lib1","SARS-CoV-2","TTTATTCGACCATTAT",2,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72T R136G",2
"lib1","SARS-CoV-2","TTTATTCGTCCAAAGG",3,47.06,9.55,-1.22,0.11,2.29,1.09,0,">1 nonsynonymous","Y35A Y91M E141N",3
"lib1","SARS-CoV-2","TTTATTCTCTGAAAAT",5,14.16,8.72,-2.05,0.3,1.87,1.15,0.03,">1 nonsynonymous","A14L S53M L60M G83L",4
"lib1","SARS-CoV-2","TTTATTCTTCATGAGT",8,206.23,9.95,-0.82,0.1,2.14,1.02,0,"1 nonsynonymous","S69L",1
"lib1","SARS-CoV-2","TTTATTGAATTGCTTT",1,6.23,10.15,-0.61,0.5,1.5,1.1,0.06,"1 nonsynonymous","W23Q",1
"lib1","SARS-CoV-2","TTTATTGAGAAAAATT",11,93.51,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","N4A F99P R124F",3
"lib1","SARS-CoV-2","TTTATTGCAGAACAGC",9,191.77,10.77,0.01,0.05,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATTGGACATTATT",1,12.06,10.83,0.06,0.1,2.9,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTATTGTGAGAGCAT",2,82.39,10.77,0.01,0.06,2.91,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTATTGTGTTAAACG",3,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Q Y91P V103S Y119T V182H",5
"lib1","SARS-CoV-2","TTTATTTACCACGTTC",1,44.91,8.42,-2.34,0.13,2.93,1.02,0.01,">1 nonsynonymous","N64H Q168R Y175R H189S",4
"lib1","SARS-CoV-2","TTTATTTACTGCCATT",3,2.46,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib1","SARS-CoV-2","TTTATTTCGCGCACAC",3,0.83,NA,NA,NA,NA,NA,NA,"stop","S41G P149Y C158V C195*",4
"lib1","SARS-CoV-2","TTTATTTGAAACACGG",1,15.53,8.68,-2.08,0.16,1.93,1.12,0.02,">1 nonsynonymous","E10D S45V K132S G174T",4
"lib1","SARS-CoV-2","TTTATTTGTCAACTTT",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M L95P Y165H",3
"lib1","SARS-CoV-2","TTTATTTGTGGCATAC",8,113.57,10.36,-0.41,0.05,2.86,1.03,0,">1 nonsynonymous","T55G D90F",2
"lib1","SARS-CoV-2","TTTATTTGTTTAAGTA",1,14.97,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","F70G",1
"lib1","SARS-CoV-2","TTTATTTTAGAAAACA",3,98.17,10.71,-0.05,0.07,2.9,1.07,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTATTTTTAAATAAC",3,19.2,9.18,-1.58,0.23,1.86,1.05,0.02,"1 nonsynonymous","Y91E",1
"lib1","SARS-CoV-2","TTTATTTTTAAATAAT",3,24.24,8.84,-1.93,0.09,2.98,1.02,0,">1 nonsynonymous","I2D K87T G117P",3
"lib1","SARS-CoV-2","TTTATTTTTTCTAGAT",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L C49Q C102R E135P P191L",5
"lib1","SARS-CoV-2","TTTCAAAAAAAGTGAC",1,54.01,8.42,-2.35,0.22,1.5,1.08,0.02,"1 nonsynonymous","D112C",1
"lib1","SARS-CoV-2","TTTCAAAACTTAAGGG",6,32.71,6,-4.76,1.39,1.5,1.14,0.01,">1 nonsynonymous","Y50S L57I R73T C102W N151S Y178L",6
"lib1","SARS-CoV-2","TTTCAAAATACCTATG",4,11.02,6,-4.76,2,3,1.05,0,">1 nonsynonymous","D97E G172Y T201I",3
"lib1","SARS-CoV-2","TTTCAAAGAACTATAA",3,36.83,8.23,-2.53,0.2,2.16,1.18,0.01,">1 nonsynonymous","T15M I138K G166T",3
"lib1","SARS-CoV-2","TTTCAAAGAATTGATA",1,35.09,10.55,-0.21,0.09,2.86,1.03,0,">1 nonsynonymous","I142Y G152D",2
"lib1","SARS-CoV-2","TTTCAAAGGGCACAAT",3,26.22,6,-4.76,2,1.5,1.1,0,">1 nonsynonymous","V52G W106H R124S",3
"lib1","SARS-CoV-2","TTTCAAATACTCCAAA",4,88.53,9.81,-0.95,0.05,2.9,1.02,0,">1 nonsynonymous","N118R T201L",2
"lib1","SARS-CoV-2","TTTCAAATAGTCCTAA",4,23.76,6.4,-4.36,0.51,1.5,1.07,0.02,">1 nonsynonymous","P7K W23N C49A",3
"lib1","SARS-CoV-2","TTTCAAATCAAGGATT",6,115.18,9.89,-0.87,0.05,2.87,1.05,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","TTTCAAATCGAAGCCG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","N110* T201Y",2
"lib1","SARS-CoV-2","TTTCAAATCGAAGTAC",1,20.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2R S19T F62Q G86V P191R",5
"lib1","SARS-CoV-2","TTTCAAATGTAAACTG",1,3.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88R",1
"lib1","SARS-CoV-2","TTTCAACACAATATTA",4,18.65,6,-4.76,2,1.5,1.11,0.04,">1 nonsynonymous","D59Y D97L R179S",3
"lib1","SARS-CoV-2","TTTCAACACCTAGGTC",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y N24F D59G Y91H L125N Y143M N157S",7
"lib1","SARS-CoV-2","TTTCAACATACGTGCG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S36L T55S G83I K87*",4
"lib1","SARS-CoV-2","TTTCAACATAGACGCG",4,25.85,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","E10G R25F K48Y F99C",4
"lib1","SARS-CoV-2","TTTCAACCATAAATAA",4,60.76,8.85,-1.91,0.1,2.83,1.05,0,"1 nonsynonymous","G146V",1
"lib1","SARS-CoV-2","TTTCAACCGATTGTAG",2,35.44,7.47,-3.29,0.42,1.5,1.15,0.06,">1 nonsynonymous","N64W E141R N171K",3
"lib1","SARS-CoV-2","TTTCAACCGTCTCATA",3,47.98,10.55,-0.22,0.1,2.86,1,0,">1 nonsynonymous","V37S N58I I104Y",3
"lib1","SARS-CoV-2","TTTCAACGAATTTTAC",1,10.66,6,-4.76,2,1.5,1.09,0.01,">1 nonsynonymous","T3C P96D L131G",3
"lib1","SARS-CoV-2","TTTCAACGACAAATAA",3,19.51,9.58,-1.18,0.34,1.88,1.31,0.04,"1 nonsynonymous","R179T",1
"lib1","SARS-CoV-2","TTTCAACGAGAGAGAT",3,89.88,10.89,0.13,0.08,2.94,1.03,0,">1 nonsynonymous","L60Y N64E T201S",3
"lib1","SARS-CoV-2","TTTCAACTGTCATAAT",2,1.22,NA,NA,NA,NA,NA,NA,"stop","N4K F12* L95V E141W",4
"lib1","SARS-CoV-2","TTTCAACTTACCTCAC",4,110.61,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L57E I138A Y159N Q176A T201L",5
"lib1","SARS-CoV-2","TTTCAAGAGAAACACT",6,48.79,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","L38A F44R S69T V77Q S108C D137V C150Y",7
"lib1","SARS-CoV-2","TTTCAAGATGCGAGAT",5,66.5,10.84,0.08,0.06,2.94,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCAAGCCAATCGGT",2,5.71,6.36,-4.4,0.76,2.19,1.11,0.02,">1 nonsynonymous","T15R D59P Y93W",3
"lib1","SARS-CoV-2","TTTCAAGCTGTGTACC",2,25.13,6.8,-3.96,0.16,1.5,1.08,0.01,">1 nonsynonymous","T63P F167S",2
"lib1","SARS-CoV-2","TTTCAAGTGCAGATCA",2,29.63,6,-4.76,1.35,1.5,1.21,0.03,">1 nonsynonymous","Y35V I104H Q176M",3
"lib1","SARS-CoV-2","TTTCAATACAGACACT",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22C F47K A105T G117Y",4
"lib1","SARS-CoV-2","TTTCAATAGTGAGTTA",7,64.64,10.6,-0.17,0.09,2.79,1.15,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCAATCCGAATACA",3,21.06,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","A81R L95S",2
"lib1","SARS-CoV-2","TTTCAATGGATCCAGT",5,65.13,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","N107I R179A",2
"lib1","SARS-CoV-2","TTTCAATGTAATAAAC",5,118.13,8.7,-2.07,0.07,2.73,1.1,0,">1 nonsynonymous","Y35P T46L Y66I L125P",4
"lib1","SARS-CoV-2","TTTCAATTACGTGACC",17,272.28,10.65,-0.12,0.04,2.89,1.04,0,"1 nonsynonymous","S139K",1
"lib1","SARS-CoV-2","TTTCAATTATTAAGAA",7,102,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","N4Y R16F Y35H S43N I88L D98T K128M R179S",8
"lib1","SARS-CoV-2","TTTCAATTCTGAGTGA",8,166.22,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","V32S V52H Y91Q N120M Q144G",5
"lib1","SARS-CoV-2","TTTCAATTTCAAATGG",5,64.64,10.77,0.01,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCAATTTTACCATA",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10C Y39T",2
"lib1","SARS-CoV-2","TTTCACAACAGAGAAA",6,2.75,NA,NA,NA,NA,NA,NA,"stop","T55N N64*",2
"lib1","SARS-CoV-2","TTTCACACCCCCAAAA",2,13.11,10.72,-0.04,0.1,2.82,1.07,0.01,">1 nonsynonymous","T3N V194A",2
"lib1","SARS-CoV-2","TTTCACAGCAAGTAAA",1,26.64,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","F12S Y119W G152C G155E L162M K198F",6
"lib1","SARS-CoV-2","TTTCACAGGAAAATTG",5,37.87,10.01,-0.76,0.16,1.5,1,0.01,">1 nonsynonymous","K94M E141Y L187E",3
"lib1","SARS-CoV-2","TTTCACCACAAATAGG",3,22.01,6,-4.76,2,3,1.2,0,">1 nonsynonymous","V20E N40L D90R E135L",4
"lib1","SARS-CoV-2","TTTCACCCAAGACTTA",8,80.71,9.92,-0.84,0.1,2.41,1.06,0,">1 nonsynonymous","S19Q V37I V52I",3
"lib1","SARS-CoV-2","TTTCACCCACAATATT",4,110.99,10.35,-0.41,0.05,2.86,1.03,0,">1 nonsynonymous","T100I L162V G174M",3
"lib1","SARS-CoV-2","TTTCACCCAGTAGGAT",4,82.93,10.73,-0.03,0.06,2.89,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCACCCCCGACTCA",1,16.29,10.21,-0.55,0.1,2.98,1.02,0,"1 nonsynonymous","E10G",1
"lib1","SARS-CoV-2","TTTCACCGGTCGGTTG",1,6.21,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F12D Q84D D90Y R136Y P161S",5
"lib1","SARS-CoV-2","TTTCACGACAACATCA",4,66.78,10.66,-0.11,0.03,2.94,1,0,"1 nonsynonymous","A105T",1
"lib1","SARS-CoV-2","TTTCACGAGGATAGAC",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y G83M R124S P149R",4
"lib1","SARS-CoV-2","TTTCACGAGTTAGTTT",2,95.48,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L60S F70S N92Q Y178T T201R",5
"lib1","SARS-CoV-2","TTTCACGCATATCTCG",1,62.24,10.75,-0.02,0.06,2.92,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCACGCGCATTATA",1,16.4,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","T100E Y119C S139F",3
"lib1","SARS-CoV-2","TTTCACGGGGTGTAAG",7,0.87,NA,NA,NA,NA,NA,NA,"stop","P7L L60F R127C E135K D137E V153*",6
"lib1","SARS-CoV-2","TTTCACGGTCAGATGA",2,14.43,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T46I P96R R136S",3
"lib1","SARS-CoV-2","TTTCACGGTGTGACAC",5,54.32,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28S C158V",2
"lib1","SARS-CoV-2","TTTCACTAACCTAAAG",5,65.83,7.96,-2.81,0.32,1.5,1.09,0.03,">1 nonsynonymous","L5W S53G T100C N107K L131V",5
"lib1","SARS-CoV-2","TTTCACTATCGATCTA",2,31.05,9.93,-0.83,0.11,1.96,1.05,0,">1 nonsynonymous","A18W D90T T201M",3
"lib1","SARS-CoV-2","TTTCACTATGCGCACC",4,42.33,6,-4.76,2,1.5,1.29,0.03,">1 nonsynonymous","L38F C49F V65Q Y165P S184P",5
"lib1","SARS-CoV-2","TTTCACTCCTCGCGTT",4,55.11,6.07,-4.69,0.87,1.5,1.17,0.01,">1 nonsynonymous","L5Q E10D Y121N T148P Y165V",5
"lib1","SARS-CoV-2","TTTCACTCTAATCCGG",3,35.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7Q N92S D137S",3
"lib1","SARS-CoV-2","TTTCACTTAGTATAAG",3,88.47,8.52,-2.25,0.09,2.82,1.09,0,">1 nonsynonymous","S53W Y159L",2
"lib1","SARS-CoV-2","TTTCAGAACTAACTGT",3,81.4,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","L131T G146L",2
"lib1","SARS-CoV-2","TTTCAGAAGCAACTTT",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71E G146M L183P",3
"lib1","SARS-CoV-2","TTTCAGAAGTACCCAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","I142T N151E Q163* K199T",4
"lib1","SARS-CoV-2","TTTCAGAATAATTATT",19,227.13,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N64Y A67D I80F Q176R",4
"lib1","SARS-CoV-2","TTTCAGAGCCCCCCGG",4,19.4,10.63,-0.14,0.08,2.99,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCAGAGTACCACTA",1,8.08,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","G101Q",1
"lib1","SARS-CoV-2","TTTCAGATAGATAAAA",3,39.84,9.92,-0.84,0.12,2.58,1.07,0.01,">1 nonsynonymous","A105V T170S K198R",3
"lib1","SARS-CoV-2","TTTCAGCAGAGACCAG",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G K48Q",2
"lib1","SARS-CoV-2","TTTCAGCTAAAACGAT",5,53.54,10.8,0.03,0.11,2.89,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCAGCTAACCTATC",4,96.87,10.76,0,0.04,2.95,1.02,0,"1 nonsynonymous","P191H",1
"lib1","SARS-CoV-2","TTTCAGCTTCAAAGTA",1,2.09,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib1","SARS-CoV-2","TTTCAGGATAGCAACC",3,97.74,10.49,-0.28,0.04,2.97,1.02,0,">1 nonsynonymous","N4S K87T",2
"lib1","SARS-CoV-2","TTTCAGGCGCTATTGT",19,250.55,10.13,-0.64,0.08,2.55,1.03,0,"1 nonsynonymous","P96R",1
"lib1","SARS-CoV-2","TTTCAGGGATCTGTGA",8,157.75,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","D98I C102L R127N Q176T",4
"lib1","SARS-CoV-2","TTTCAGGTGACAACGG",3,68.04,8.97,-1.79,0.13,1.74,1.11,0.01,">1 nonsynonymous","F44I N107V",2
"lib1","SARS-CoV-2","TTTCAGTACTGTAAAT",8,76.04,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","I28D V52L C61M Y91M",4
"lib1","SARS-CoV-2","TTTCAGTATTATTTAT",5,72.92,10.59,-0.18,0.07,2.85,1.12,0,"1 nonsynonymous","F44I",1
"lib1","SARS-CoV-2","TTTCAGTCATTACACA",1,16.56,10.13,-0.64,0.1,2.31,1.06,0,"1 nonsynonymous","P96E",1
"lib1","SARS-CoV-2","TTTCAGTCGCATCCTT",6,59.14,9.55,-1.21,0.35,1.5,1,0.06,">1 nonsynonymous","A33C E76K R136S",3
"lib1","SARS-CoV-2","TTTCAGTGACCCATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45F E154*",2
"lib1","SARS-CoV-2","TTTCAGTGTTCAGAAT",3,2,NA,NA,NA,NA,NA,NA,"stop","F62K K132* S164M P177N",4
"lib1","SARS-CoV-2","TTTCAGTTAGACAGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122R G155S",2
"lib1","SARS-CoV-2","TTTCAGTTTTAAAGCG",1,20.06,10.73,-0.03,0.06,2.92,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCATACAAATGATT",13,52.26,8.57,-2.19,0.17,1.5,1.16,0.01,">1 nonsynonymous","N13P D59K V77L",3
"lib1","SARS-CoV-2","TTTCATACAATAAATG",3,23.39,10.87,0.1,0.12,2.85,1.04,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTTCATACATTGGGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10G R73* V103H P133G V180G",5
"lib1","SARS-CoV-2","TTTCATACGGGCACGA",5,55.94,6,-4.76,1.44,1.5,1.22,0.01,">1 nonsynonymous","A18F L57G G101D R136K",4
"lib1","SARS-CoV-2","TTTCATATATAATATA",5,45.81,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","N4Y I80N T100A F126V",4
"lib1","SARS-CoV-2","TTTCATATATAATTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R N13I C102R F185N",4
"lib1","SARS-CoV-2","TTTCATCAATGATCTG",7,49.01,6,-4.76,1.26,1.5,1.16,0.02,">1 nonsynonymous","N92K F99Y N151I",3
"lib1","SARS-CoV-2","TTTCATCATAAAAATT",1,7.06,6.14,-4.62,1.34,3,1.08,0.01,">1 nonsynonymous","K26G L38I C102R P197T",4
"lib1","SARS-CoV-2","TTTCATCGGAGGAAAT",1,11.41,10.46,-0.3,0.1,2.91,1,0.01,"1 nonsynonymous","S45P",1
"lib1","SARS-CoV-2","TTTCATGACACGGGTA",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A V20K C61E L95S T140D",5
"lib1","SARS-CoV-2","TTTCATGACGTGGATA",5,86.09,10,-0.77,0.12,2.07,1.04,0.01,">1 nonsynonymous","C6K S164M",2
"lib1","SARS-CoV-2","TTTCATGAGACTGGAT",3,67.02,6.93,-3.84,0.35,1.5,1.27,0.02,">1 nonsynonymous","L5R C150E",2
"lib1","SARS-CoV-2","TTTCATGATTCAATTA",2,1.2,NA,NA,NA,NA,NA,NA,"stop","T3F F99* V115K",3
"lib1","SARS-CoV-2","TTTCATGGAAAAAAAA",5,24.98,6,-4.76,2,1.5,1.14,0.07,">1 nonsynonymous","R25V Q84L F99H F156Y T170F",5
"lib1","SARS-CoV-2","TTTCATGGCCGGGGAG",9,14.64,6,-4.76,2,1.5,1.34,0.04,">1 nonsynonymous","S41F P54G Y121R P133L",4
"lib1","SARS-CoV-2","TTTCATGTATATCAAG",6,8.44,8.04,-2.73,0.29,1.5,1.08,0.07,">1 nonsynonymous","C102M N151I Q163F",3
"lib1","SARS-CoV-2","TTTCATGTCTACGACT",7,10.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S69L P96F Q168S",3
"lib1","SARS-CoV-2","TTTCATGTTCCCTACG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","D34L F99* L125Y",3
"lib1","SARS-CoV-2","TTTCATTCGAAGTTTT",3,20.12,6,-4.76,1.7,1.5,1.24,0.02,">1 nonsynonymous","P82E G117I Y143C",3
"lib1","SARS-CoV-2","TTTCATTGCAAAATTG",4,85.91,10.75,-0.01,0.06,2.91,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCATTTAAAAAATA",4,0.61,NA,NA,NA,NA,NA,NA,"stop","T85K S200*",2
"lib1","SARS-CoV-2","TTTCATTTCACGCGTT",3,24.94,6.24,-4.53,0.75,1.5,1.16,0.02,">1 nonsynonymous","N58K D90W S129F R179G T201W",5
"lib1","SARS-CoV-2","TTTCCAAAAAGAATCT",4,14.85,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","C61Y L95R Y123V",3
"lib1","SARS-CoV-2","TTTCCAAATAATATCA",1,17.41,6,-4.76,2,3,1.15,0.01,">1 nonsynonymous","C6G E10L Q84F N107T P149T",5
"lib1","SARS-CoV-2","TTTCCAAATTCAGAAA",3,21.41,10.59,-0.17,0.1,2.95,1.01,0,"1 nonsynonymous","S184R",1
"lib1","SARS-CoV-2","TTTCCAACTCGTACTA",2,26.56,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","I88G A105L N151H",3
"lib1","SARS-CoV-2","TTTCCAAGGCATGTAC",4,37.27,9.62,-1.15,0.1,2.79,1.04,0,">1 nonsynonymous","N4R A33T S41R F156L K199M",5
"lib1","SARS-CoV-2","TTTCCAAGTATAATCG",7,73.51,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","P7I K56S C150K E154D",4
"lib1","SARS-CoV-2","TTTCCAATCGAGGCCA",2,23.05,6,-4.76,2,1.5,1.22,0.08,">1 nonsynonymous","T55P A81R K94E A105V E154H",5
"lib1","SARS-CoV-2","TTTCCAATTCTCCGCA",10,131.03,10.55,-0.21,0.05,2.9,1.06,0,">1 nonsynonymous","D59G Q144S",2
"lib1","SARS-CoV-2","TTTCCACAGGTTTATG",6,68.15,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C49F N130H C158G",3
"lib1","SARS-CoV-2","TTTCCACATATAGATA",1,20.51,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","A14H D137Q G155Y T201K",4
"lib1","SARS-CoV-2","TTTCCACATCAGCACG",2,3.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49G",1
"lib1","SARS-CoV-2","TTTCCACTAAAAAAGG",3,3.23,NA,NA,NA,NA,NA,NA,"stop","I88* P96* T201V",3
"lib1","SARS-CoV-2","TTTCCAGTCTTATCAC",10,26.11,6,-4.76,2,1.5,1.13,0.01,"1 nonsynonymous","V103N",1
"lib1","SARS-CoV-2","TTTCCATACAATACAC",2,56.16,10.25,-0.52,0.06,2.9,1,0,"1 nonsynonymous","L57D",1
"lib1","SARS-CoV-2","TTTCCATGATAAGAGT",3,5.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K N58Y",2
"lib1","SARS-CoV-2","TTTCCCAAACAGAACA",8,128.7,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","R16L N92F",2
"lib1","SARS-CoV-2","TTTCCCACGCCTAAAA",4,42.57,8.9,-1.87,0.12,2.25,1.19,0.01,">1 nonsynonymous","L60M N118L S129I",3
"lib1","SARS-CoV-2","TTTCCCACGGGCGTGA",2,38.18,9.52,-1.25,0.17,2.12,1.13,0.01,">1 nonsynonymous","G9L T15K V32D S41E C61H I142L V153G L183I",8
"lib1","SARS-CoV-2","TTTCCCATAATTATGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib1","SARS-CoV-2","TTTCCCATACGATGAG",5,37.28,8.09,-2.68,0.29,1.5,1.08,0.04,"1 nonsynonymous","N107Y",1
"lib1","SARS-CoV-2","TTTCCCATAGCAAACA",2,23.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R W106G N120M P149V",4
"lib1","SARS-CoV-2","TTTCCCATTCCTCAAG",4,22.74,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","R127L I142N V173I",3
"lib1","SARS-CoV-2","TTTCCCCCAGCCTCAA",1,32.44,9.31,-1.46,0.16,2.72,1.19,0.01,">1 nonsynonymous","A42G S113C",2
"lib1","SARS-CoV-2","TTTCCCCCCATTAACT",5,22.13,7.76,-3,0.34,1.5,1.07,0.04,">1 nonsynonymous","D59V N107F P149F Y178L",4
"lib1","SARS-CoV-2","TTTCCCCCCGGAGGAA",3,40.48,10.67,-0.1,0.05,2.93,1.05,0,">1 nonsynonymous","G9D D98Y",2
"lib1","SARS-CoV-2","TTTCCCCCTTACACTC",7,83.29,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","S19V K87E S139G",3
"lib1","SARS-CoV-2","TTTCCCCGCACGTGAG",11,153.98,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","A89I F167H",2
"lib1","SARS-CoV-2","TTTCCCCGTTCCGAAA",4,6.7,8.35,-2.41,0.25,1.82,1.2,0.02,">1 nonsynonymous","N13S N120M P169W",3
"lib1","SARS-CoV-2","TTTCCCCTAGAGTGCC",2,0.7,NA,NA,NA,NA,NA,NA,"stop","T3* R78C F126V T201H",4
"lib1","SARS-CoV-2","TTTCCCCTATAAATAG",7,75.19,10.16,-0.61,0.06,2.83,1.02,0,">1 nonsynonymous","A145T P149T",2
"lib1","SARS-CoV-2","TTTCCCGAACATCAAA",3,39.8,6,-4.76,2,1.5,1.18,0.03,">1 nonsynonymous","I2T D59L D90Y Y121N E141N T148P F156T",7
"lib1","SARS-CoV-2","TTTCCCGTTTTAACTT",6,101.71,9.46,-1.31,0.09,2.55,1.1,0,">1 nonsynonymous","L122M V173L P177C K199T",4
"lib1","SARS-CoV-2","TTTCCCTAGGGATCAG",11,25.49,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","C6L D97L G117L C150R S200F",5
"lib1","SARS-CoV-2","TTTCCCTATCAAAATT",1,13.17,6,-4.76,1.62,3,1.03,0,">1 nonsynonymous","I88R P161L",2
"lib1","SARS-CoV-2","TTTCCCTGTTTGCACA",1,12.59,6,-4.76,1.5,3,1.22,0.02,">1 nonsynonymous","P96L G117A T201H",3
"lib1","SARS-CoV-2","TTTCCCTTAATTTCCT",2,5.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S43L P96Y V103G D137L",4
"lib1","SARS-CoV-2","TTTCCGAAATCAGGAC",2,11.72,10.2,-0.56,0.22,1.79,1.01,0.02,"1 nonsynonymous","P96L",1
"lib1","SARS-CoV-2","TTTCCGAGAAGTCCTC",1,51.73,6,-4.76,2,1.5,1.19,0,">1 nonsynonymous","I28R S41C N92S",3
"lib1","SARS-CoV-2","TTTCCGAGTTGCGAAA",3,55.02,10.2,-0.57,0.07,2.93,1,0,">1 nonsynonymous","F12V G174A S200L",3
"lib1","SARS-CoV-2","TTTCCGATCTGTGATA",4,192.34,10.81,0.04,0.06,2.93,1.04,0,">1 nonsynonymous","F134Y Y143F P149D",3
"lib1","SARS-CoV-2","TTTCCGATGGTCTAAT",4,47.12,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V32Y K56F I88L F134V",4
"lib1","SARS-CoV-2","TTTCCGCAAGCACCTA",3,19,10.74,-0.02,0.12,2.95,1.04,0.01,">1 nonsynonymous","I2L Y35L S164T",3
"lib1","SARS-CoV-2","TTTCCGCCACTCCTGG",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125R F160C Y178G",3
"lib1","SARS-CoV-2","TTTCCGCCAGTGATTC",5,93.33,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","V32N G51S A81T A105L T140I",5
"lib1","SARS-CoV-2","TTTCCGCCATCTAAGT",4,37.92,8.83,-1.94,0.13,1.78,1.1,0.01,">1 nonsynonymous","E10R T140P G152L",3
"lib1","SARS-CoV-2","TTTCCGCCGTAAAAAA",6,170.4,10.44,-0.32,0.04,2.83,1.05,0,">1 nonsynonymous","N40T K48S",2
"lib1","SARS-CoV-2","TTTCCGCTACCAACGA",3,83.96,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F44T G51T E141R C150V K198W",5
"lib1","SARS-CoV-2","TTTCCGGAAACATACT",10,95.58,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","G9Q N30R T55L C158V Q163H",5
"lib1","SARS-CoV-2","TTTCCGGACCCAACAA",2,76.67,10.48,-0.29,0.1,2.84,1.01,0,">1 nonsynonymous","N4P V11M L122G T201S",4
"lib1","SARS-CoV-2","TTTCCGGAGGATGAAG",2,37.04,10.75,-0.02,0.1,2.92,1.06,0,"1 nonsynonymous","E154S",1
"lib1","SARS-CoV-2","TTTCCGGCACAATGAG",6,108.35,8.28,-2.49,0.18,1.75,1.14,0.01,">1 nonsynonymous","G116S P133L F160T",3
"lib1","SARS-CoV-2","TTTCCGGCTAAGTGAT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","W23* S113T",2
"lib1","SARS-CoV-2","TTTCCGGTAACAAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P L60I I104L R136K",4
"lib1","SARS-CoV-2","TTTCCGTATCTAACCG",2,71.16,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","V77L G146Y G172L",3
"lib1","SARS-CoV-2","TTTCCGTGTTAAAATT",7,59.99,6,-4.76,1.74,1.5,1.16,0.02,">1 nonsynonymous","E10D P82M N92D",3
"lib1","SARS-CoV-2","TTTCCGTTTGATAACG",3,95.78,10.73,-0.04,0.05,2.89,1.06,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","TTTCCTAAACCCGTTA",5,0.8,NA,NA,NA,NA,NA,NA,"stop","T3M V37L D59P I88M F134D T140* C150H",7
"lib1","SARS-CoV-2","TTTCCTACACTTGTGA",11,129,6,-4.76,1.62,1.5,1.15,0.01,">1 nonsynonymous","D97S A105L N120T F167Q",4
"lib1","SARS-CoV-2","TTTCCTAGACTCAGCA",4,119.04,10.73,-0.03,0.05,2.93,1.02,0,"1 nonsynonymous","I2Q",1
"lib1","SARS-CoV-2","TTTCCTATTCTTGTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","C49* T55R V103M A190L",4
"lib1","SARS-CoV-2","TTTCCTCAGATACGTA",2,34.46,6,-4.76,1.5,1.5,1.22,0.03,">1 nonsynonymous","S164F F167C",2
"lib1","SARS-CoV-2","TTTCCTCTAATCCATG",3,23.44,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","L57Y N64E N92P S139R",4
"lib1","SARS-CoV-2","TTTCCTGAACGGGCCT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","A89* N151L",2
"lib1","SARS-CoV-2","TTTCCTGCAGATCATA",6,27.09,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","V11S S41T Y66D D75G T100K A145T K198L",7
"lib1","SARS-CoV-2","TTTCCTTAGACACTAT",5,131.18,10.15,-0.61,0.06,2.66,1.02,0,"1 nonsynonymous","R136F",1
"lib1","SARS-CoV-2","TTTCCTTCTAAAAAAC",3,19.48,6,-4.76,2,3,1.09,0,">1 nonsynonymous","V20M Y66C",2
"lib1","SARS-CoV-2","TTTCCTTCTCCGTACG",3,9.18,6,-4.76,2,3,1.05,0,"1 nonsynonymous","I72G",1
"lib1","SARS-CoV-2","TTTCGAAAAATAGGAG",3,63.1,6,-4.76,1.93,1.5,1.16,0.01,">1 nonsynonymous","T3M Y121N S139V F167A",4
"lib1","SARS-CoV-2","TTTCGAAAACAGAGGC",4,0.97,NA,NA,NA,NA,NA,NA,"stop","N58M V153* Y178D",3
"lib1","SARS-CoV-2","TTTCGAAAAGTTTAGG",5,22.92,10.09,-0.68,0.07,2.89,1.04,0,">1 nonsynonymous","D34S S53I T201C",3
"lib1","SARS-CoV-2","TTTCGAAACCAGATTA",6,83.68,6.07,-4.7,0.79,1.5,1.11,0.01,">1 nonsynonymous","A89E V103I",2
"lib1","SARS-CoV-2","TTTCGAAATTAGAGAA",10,20.05,6.69,-4.07,0.68,1.5,1.22,0.05,">1 nonsynonymous","A33S P82W D98E G174K V180E",5
"lib1","SARS-CoV-2","TTTCGAAATTTTGACA",2,10.84,6,-4.76,2,1.5,1.12,0.03,">1 nonsynonymous","S43H D112G Y119L K198M",4
"lib1","SARS-CoV-2","TTTCGAACAAAGCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","E76A N130T E141*",3
"lib1","SARS-CoV-2","TTTCGAAGACTGTCAC",2,0.31,NA,NA,NA,NA,NA,NA,"stop","R27S Y50N Y91K Y143L Y165*",5
"lib1","SARS-CoV-2","TTTCGAATGATACGAA",4,67.93,9.67,-1.09,0.13,1.78,1.1,0.01,">1 nonsynonymous","V65K D90R",2
"lib1","SARS-CoV-2","TTTCGAATTAATCTTA",3,1.85,NA,NA,NA,NA,NA,NA,"stop","T15D I80F D98A S129*",4
"lib1","SARS-CoV-2","TTTCGACGTAGCTGGC",7,1.84,NA,NA,NA,NA,NA,NA,"stop","W106L G116V F156*",3
"lib1","SARS-CoV-2","TTTCGACTTAATCTAA",4,58.35,6,-4.76,1.22,1.5,1.12,0.01,">1 nonsynonymous","L5M Y119L I142S G146I T201K",5
"lib1","SARS-CoV-2","TTTCGAGATGACACAC",2,0.37,NA,NA,NA,NA,NA,NA,"stop","T46* K56S",2
"lib1","SARS-CoV-2","TTTCGAGGGACACTAA",3,17.81,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","G9K S19K R136D S147I P149E G155Y T201D",7
"lib1","SARS-CoV-2","TTTCGAGTTAAAGGAA",4,84.79,10.76,-0.01,0.07,2.89,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTCGAGTTGAGTCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","R27W N58* V65P V77P D97V N118I P133S",7
"lib1","SARS-CoV-2","TTTCGATAAGTGTGCT",2,51.23,10.62,-0.15,0.06,2.9,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCGATAGTTAATGC",5,30.55,10.81,0.05,0.07,2.9,1.05,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCGATTGGCCATAA",5,105.52,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","F62M N118Q L125I P177T",4
"lib1","SARS-CoV-2","TTTCGATTGTCACTGT",3,81.75,6.74,-4.02,0.28,1.5,1.2,0.01,">1 nonsynonymous","P7Q Y21H S139P",3
"lib1","SARS-CoV-2","TTTCGATTTATATGTA",3,1.13,NA,NA,NA,NA,NA,NA,"stop","T3F R16L N92* E154D",4
"lib1","SARS-CoV-2","TTTCGATTTCAGTACT",2,23.76,6,-4.76,2,1.5,1.15,0.04,">1 nonsynonymous","F99S K128L",2
"lib1","SARS-CoV-2","TTTCGCAACTGATGGA",2,9.37,10.5,-0.26,0.12,2.7,1.02,0.01,">1 nonsynonymous","N30Y K128S",2
"lib1","SARS-CoV-2","TTTCGCACTGCATCTA",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S P54Y L60V L95R V115G T201M",6
"lib1","SARS-CoV-2","TTTCGCAGCCTGAAAG",7,0.04,NA,NA,NA,NA,NA,NA,"stop","L5R S19* G116S G174R",4
"lib1","SARS-CoV-2","TTTCGCAGGTGAAAAA",7,63.6,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","N4I L95Y F167D E186C",4
"lib1","SARS-CoV-2","TTTCGCATAAAAAATG",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I P161G G166E",3
"lib1","SARS-CoV-2","TTTCGCATTCGCGCTG",1,7.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23T Q84W P96N",3
"lib1","SARS-CoV-2","TTTCGCCAACCTGAGT",6,116.38,10.68,-0.08,0.04,2.96,1,0,">1 nonsynonymous","Y35V E141T",2
"lib1","SARS-CoV-2","TTTCGCCGATTTTCCC",2,27.15,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T63R Y91T D98F S139F T201S",5
"lib1","SARS-CoV-2","TTTCGCCGTACATCGG",4,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Q84K",2
"lib1","SARS-CoV-2","TTTCGCCTCAGCATTT",6,39.78,6,-4.76,2,3,1.21,0,">1 nonsynonymous","E76Y Y165E G172L",3
"lib1","SARS-CoV-2","TTTCGCCTGCAGATAT",1,13.51,10.48,-0.29,0.09,2.94,1.06,0,"1 nonsynonymous","L38M",1
"lib1","SARS-CoV-2","TTTCGCCTGGGGATCC",1,36.5,10.7,-0.07,0.02,2.95,1,0,"1 nonsynonymous","K132F",1
"lib1","SARS-CoV-2","TTTCGCGATGAATATC",1,31.57,10.73,-0.03,0.08,2.85,1.1,0.01,">1 nonsynonymous","L5Q L60M L125I T148M",4
"lib1","SARS-CoV-2","TTTCGCGTATACTAAT",6,37.1,10.81,0.05,0.07,2.9,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCGCGTGAATACTA",5,74.18,9.67,-1.1,0.05,2.76,1.05,0,"1 nonsynonymous","Y119T",1
"lib1","SARS-CoV-2","TTTCGCGTGGAACTTA",4,70.35,10.74,-0.03,0.08,2.87,1.06,0,">1 nonsynonymous","N64T S147V",2
"lib1","SARS-CoV-2","TTTCGCTATTCCATTT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","F44D C61V S69* S184K",4
"lib1","SARS-CoV-2","TTTCGCTCTATGTTCG",1,5.41,9.78,-0.98,0.43,1.95,1.13,0.06,"1 nonsynonymous","F17R",1
"lib1","SARS-CoV-2","TTTCGCTGTTGTGCAC",4,72.66,10.86,0.09,0.11,2.74,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCGGAATAGTAAGT",6,95.44,10.88,0.12,0.08,2.92,1.02,0,">1 nonsynonymous","G83R Q163Y",2
"lib1","SARS-CoV-2","TTTCGGAATATGTTCT",2,10.23,10.65,-0.11,0.08,3,1,0,"1 nonsynonymous","S36L",1
"lib1","SARS-CoV-2","TTTCGGACGAAAAGGG",5,0.55,NA,NA,NA,NA,NA,NA,"stop","P54R F62* I142G K199H",4
"lib1","SARS-CoV-2","TTTCGGACTCTCGCCA",2,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N L95R S147V",3
"lib1","SARS-CoV-2","TTTCGGATCCTTATAC",2,28.54,10.63,-0.13,0.08,2.78,1.15,0,"1 nonsynonymous","A42D",1
"lib1","SARS-CoV-2","TTTCGGCATCAAGTGG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","E141S N151* F156V",3
"lib1","SARS-CoV-2","TTTCGGCTACTCCAGA",4,25.01,10.18,-0.58,0.08,2.94,1,0,">1 nonsynonymous","Y39W S45D Q84V K114S Q144T T201A",6
"lib1","SARS-CoV-2","TTTCGGGACTTGCCTC",5,5.01,7.58,-3.19,0.43,2.06,1.02,0.02,">1 nonsynonymous","G101D G146M",2
"lib1","SARS-CoV-2","TTTCGGGATTTATTGA",2,5.18,8.99,-1.77,0.25,2.16,1,0.03,">1 nonsynonymous","D34N L162Y",2
"lib1","SARS-CoV-2","TTTCGGGCGGAGACAT",3,55.68,9.32,-1.45,0.07,2.74,1.1,0,">1 nonsynonymous","S43K N58I Y119S",3
"lib1","SARS-CoV-2","TTTCGGGTAATTATTC",1,0.62,NA,NA,NA,NA,NA,NA,"stop","N4A I28* I72T A81N V181L A190V",6
"lib1","SARS-CoV-2","TTTCGGTAATTCCCGA",3,101.59,9.89,-0.87,0.12,1.72,1.08,0.01,"1 nonsynonymous","S69V",1
"lib1","SARS-CoV-2","TTTCGGTATTCTCCAG",1,19.79,6,-4.76,2,1.5,1.14,0.07,">1 nonsynonymous","V77R D112L",2
"lib1","SARS-CoV-2","TTTCGGTCATCTTTAA",3,21.27,7.95,-2.81,0.39,1.5,1.1,0.05,">1 nonsynonymous","A18K G83H S129F Q176H",4
"lib1","SARS-CoV-2","TTTCGTACATTGGGCA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R V103N F160Y R179W S184D",5
"lib1","SARS-CoV-2","TTTCGTACCACTAGAA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N V103N S139D",3
"lib1","SARS-CoV-2","TTTCGTACTTTAGAGA",3,15.28,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","E10H A33C L131R",3
"lib1","SARS-CoV-2","TTTCGTATATCATAAT",1,29.21,9.05,-1.71,0.17,2.62,1.13,0.01,">1 nonsynonymous","L5M V37C N64Y E141K Q168L T201L",6
"lib1","SARS-CoV-2","TTTCGTATGTCAAAAC",4,89.76,10.75,-0.01,0.05,2.97,1.02,0,">1 nonsynonymous","I2P T100L",2
"lib1","SARS-CoV-2","TTTCGTCTAAAGTATT",13,14.89,9.99,-0.77,0.34,2.32,1.18,0.06,">1 nonsynonymous","F12V T55I",2
"lib1","SARS-CoV-2","TTTCGTCTATCTGGAA",3,21.6,6,-4.76,2,3,1.16,0,">1 nonsynonymous","E10Q N58K K87Y D137N V182H",5
"lib1","SARS-CoV-2","TTTCGTGCACCATTAC",4,0.03,NA,NA,NA,NA,NA,NA,"stop","C49N L95* W106L S200M",4
"lib1","SARS-CoV-2","TTTCGTGCACGCTAAA",3,25.46,6.36,-4.41,0.83,1.5,1.16,0.04,">1 nonsynonymous","R27G D68M K87M",3
"lib1","SARS-CoV-2","TTTCTAAAAAATAGGA",6,13.93,6.32,-4.44,1.09,1.5,1.36,0.05,">1 nonsynonymous","C49T P133S",2
"lib1","SARS-CoV-2","TTTCTAAAAAGTTGTC",7,0.7,NA,NA,NA,NA,NA,NA,"stop","R16Y A18E C61L G74M D90T D112* N151D",7
"lib1","SARS-CoV-2","TTTCTAAAAGATATTC",3,1470.27,10.77,0.01,0.05,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCTAAACTAGTAAT",7,46.14,10.22,-0.55,0.08,2.25,1,0,"1 nonsynonymous","D34M",1
"lib1","SARS-CoV-2","TTTCTAAATTAAGGAA",6,54.86,10.02,-0.74,0.12,2.38,1.1,0.01,">1 nonsynonymous","A14L F160G",2
"lib1","SARS-CoV-2","TTTCTAACAACTTGTC",11,5.04,NA,NA,NA,NA,NA,NA,"stop","I2* K48N F99E T201L",4
"lib1","SARS-CoV-2","TTTCTAACCCCATCGA",1,48.76,6.05,-4.72,0.72,1.5,1.1,0.01,">1 nonsynonymous","K48M I72F K198G",3
"lib1","SARS-CoV-2","TTTCTAACTGCTTAGT",2,12.13,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","D68R I88S D112R P149T C158W",5
"lib1","SARS-CoV-2","TTTCTAAGAACACATG",4,143.11,10.73,-0.03,0.07,2.88,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTCTAAGAAGAAAAT",4,161.78,10.57,-0.2,0.03,2.94,1.02,0,">1 nonsynonymous","Y21W K48N",2
"lib1","SARS-CoV-2","TTTCTAAGATTAAAAA",2,29.61,7.32,-3.44,0.34,1.5,1.2,0.02,">1 nonsynonymous","S45P G146V",2
"lib1","SARS-CoV-2","TTTCTAAGCACCTTCG",1,16.36,8.86,-1.9,0.22,2.41,1.05,0.01,">1 nonsynonymous","N107G Y143W",2
"lib1","SARS-CoV-2","TTTCTAATCAAAAAAC",7,35.65,7.95,-2.81,0.34,1.5,1.03,0.03,">1 nonsynonymous","E10V K94L",2
"lib1","SARS-CoV-2","TTTCTAATCTCGAAAA",5,119.13,10.4,-0.37,0.06,2.9,1.04,0,"1 nonsynonymous","K87M",1
"lib1","SARS-CoV-2","TTTCTACAATGAACTG",4,18.78,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","A22T W106E Y143S G152H",4
"lib1","SARS-CoV-2","TTTCTACAGGGAGTAA",2,0.79,NA,NA,NA,NA,NA,NA,"stop","F156* Y175S",2
"lib1","SARS-CoV-2","TTTCTACCCAAACTAC",1,65.24,10.74,-0.03,0.03,2.99,1,0,"1 nonsynonymous","D98T",1
"lib1","SARS-CoV-2","TTTCTACCTTTGAAGT",3,11.43,6,-4.76,2,3,1.16,0,">1 nonsynonymous","C6G S36Q K56L P82A D98I T148S",6
"lib1","SARS-CoV-2","TTTCTACGTGATAATG",4,5.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D R136I",2
"lib1","SARS-CoV-2","TTTCTAGAATGCCCTG",4,27.94,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","E10D K87S V103M C150H N157S",5
"lib1","SARS-CoV-2","TTTCTAGACCATGCAC",2,12.42,6,-4.76,2,1.5,1.23,0.02,">1 nonsynonymous","Q84E C102G",2
"lib1","SARS-CoV-2","TTTCTAGCATTGCAAT",6,90.86,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","R73E I80E",2
"lib1","SARS-CoV-2","TTTCTAGCCTCAAATC",6,2.39,NA,NA,NA,NA,NA,NA,"stop","Y39* I142F P197R",3
"lib1","SARS-CoV-2","TTTCTAGTATATATGA",1,6.81,6,-4.76,2,3,1.16,0.02,">1 nonsynonymous","C6V I88N R136L",3
"lib1","SARS-CoV-2","TTTCTAGTGAGTGGAA",7,93.7,10.68,-0.09,0.05,2.85,1.1,0,"1 nonsynonymous","K198H",1
"lib1","SARS-CoV-2","TTTCTAGTTGAGTATA",24,83.26,6,-4.76,1.94,1.5,1.21,0.01,">1 nonsynonymous","T15V Y91S Y123A K199R",4
"lib1","SARS-CoV-2","TTTCTAGTTTTTAACT",6,93.61,9.2,-1.57,0.11,2.6,1.14,0,">1 nonsynonymous","Q144T P169Q E186N",3
"lib1","SARS-CoV-2","TTTCTATGGACGAAGC",2,81.18,10.4,-0.36,0.05,2.84,1.05,0,">1 nonsynonymous","V65T K198Q",2
"lib1","SARS-CoV-2","TTTCTATTTTTTTAAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","T46A V173*",2
"lib1","SARS-CoV-2","TTTCTCAAACACGCAA",3,17.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G N30K A81L",3
"lib1","SARS-CoV-2","TTTCTCAACTATTCTA",3,45.72,6.23,-4.54,0.59,1.5,1.19,0.02,"1 nonsynonymous","R25L",1
"lib1","SARS-CoV-2","TTTCTCAAGAGAGTAC",1,108.47,9.67,-1.1,0.03,2.89,1.04,0,">1 nonsynonymous","C61L T170M",2
"lib1","SARS-CoV-2","TTTCTCAAGTCTAAAA",4,74.22,7.31,-3.46,0.21,1.5,1.15,0.02,"1 nonsynonymous","C150I",1
"lib1","SARS-CoV-2","TTTCTCAATACATGGG",4,19.92,6,-4.76,2,1.5,1.16,0.03,">1 nonsynonymous","N13L Y91A T100K A105N",4
"lib1","SARS-CoV-2","TTTCTCAATCTCAAAG",3,16.71,6,-4.76,2,3,1.31,0.01,">1 nonsynonymous","C6R S36L R78L W106S G146H",5
"lib1","SARS-CoV-2","TTTCTCACCTAGGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118S Y143K",2
"lib1","SARS-CoV-2","TTTCTCCACGACATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15S C49D D98* F167M",4
"lib1","SARS-CoV-2","TTTCTCCCCCAGTCAG",1,17.97,9.83,-0.94,0.06,2.95,1,0,">1 nonsynonymous","I142D Q168W",2
"lib1","SARS-CoV-2","TTTCTCGAAGTATGAG",7,62.87,6.12,-4.64,0.52,1.5,1.12,0.01,">1 nonsynonymous","C61A C150L",2
"lib1","SARS-CoV-2","TTTCTCGACATAACAA",2,33.8,10.22,-0.54,0.16,2.68,1.28,0.01,">1 nonsynonymous","C61V Y91F V153L",3
"lib1","SARS-CoV-2","TTTCTCGTCGTTTACT",14,147.63,6.01,-4.75,0.49,1.5,1.16,0,">1 nonsynonymous","G101A F134T",2
"lib1","SARS-CoV-2","TTTCTCGTCTACAACT",5,23.81,6,-4.76,0.48,3,1.08,0.01,">1 nonsynonymous","T15H Y93K",2
"lib1","SARS-CoV-2","TTTCTCTAACTACATG",1,3.1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTTCTCTCGAGAGATA",6,82.67,10.48,-0.28,0.04,2.92,1.01,0,"1 nonsynonymous","F62Q",1
"lib1","SARS-CoV-2","TTTCTCTTTCCCCATG",4,78.61,10.67,-0.1,0.08,2.89,1.08,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTCTGAAATCAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I28G P54D G152*",3
"lib1","SARS-CoV-2","TTTCTGAACCACTTTG",2,1.22,NA,NA,NA,NA,NA,NA,"stop","A33F F44K N58* N107* P149L G155M",6
"lib1","SARS-CoV-2","TTTCTGACGTATATCA",3,132.34,10.56,-0.2,0.05,2.92,1.04,0,">1 nonsynonymous","I28M Y50W L57S",3
"lib1","SARS-CoV-2","TTTCTGACTAGCAAGA",2,50.97,9.76,-1.01,0.11,2.75,1.1,0,"1 nonsynonymous","P169C",1
"lib1","SARS-CoV-2","TTTCTGAGTAATAAAT",1,6.02,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","G9Q E76A D90I S113L",4
"lib1","SARS-CoV-2","TTTCTGAGTACTCCAC",3,22.01,9.46,-1.3,0.21,1.71,1.14,0.02,">1 nonsynonymous","N24H W106A R136S P197M",4
"lib1","SARS-CoV-2","TTTCTGAGTGTTATCC",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66N D137W S200Q",3
"lib1","SARS-CoV-2","TTTCTGAGTTAAACAT",7,54.16,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","C6W F70A P96R",3
"lib1","SARS-CoV-2","TTTCTGATAGACATTG",9,216.29,6,-4.76,2,1.5,1.13,0,">1 nonsynonymous","Q144M G172E",2
"lib1","SARS-CoV-2","TTTCTGATCAAATCGA",2,60.77,9.89,-0.87,0.12,2.18,1.1,0.01,">1 nonsynonymous","V32A P133T",2
"lib1","SARS-CoV-2","TTTCTGCAAAATAAAA",4,62.06,10.86,0.09,0.08,2.91,1.07,0,">1 nonsynonymous","N4Q K48R",2
"lib1","SARS-CoV-2","TTTCTGCTCAGGAAAG",2,6.17,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","R25I Y39D T63S G83F",4
"lib1","SARS-CoV-2","TTTCTGGCAAATGCCG",6,83.82,8.4,-2.37,0.34,1.5,1,0.05,"1 nonsynonymous","D68N",1
"lib1","SARS-CoV-2","TTTCTGGGCTTGCCCA",5,69.98,6,-4.76,1.94,1.5,1.11,0,">1 nonsynonymous","F44T V65R L125V E141G P161S",5
"lib1","SARS-CoV-2","TTTCTGTGACGCGACC",2,16.28,6,-4.76,2,1.5,1.08,0.01,">1 nonsynonymous","Y35A N92Y",2
"lib1","SARS-CoV-2","TTTCTGTTATATCAAC",2,19.24,10.39,-0.38,0.07,2.84,1.05,0,">1 nonsynonymous","K56L D90L",2
"lib1","SARS-CoV-2","TTTCTGTTTACCAAAC",2,1.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58M",1
"lib1","SARS-CoV-2","TTTCTTAAAGTCATAT",6,57.85,10.14,-0.63,0.07,2.76,1,0,">1 nonsynonymous","T15P N110W P149I",3
"lib1","SARS-CoV-2","TTTCTTAAGAATATAT",3,128.43,10.81,0.05,0.06,2.93,1.03,0,"1 nonsynonymous","H189S",1
"lib1","SARS-CoV-2","TTTCTTACAGTAACGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T V52I A81P",3
"lib1","SARS-CoV-2","TTTCTTACCACCAAAG",2,5.69,10.18,-0.59,0.14,2.84,1.08,0,"1 nonsynonymous","D34G",1
"lib1","SARS-CoV-2","TTTCTTACGGTACATT",8,90.99,9.41,-1.35,0.26,1.5,1.09,0.03,">1 nonsynonymous","N4R E10N W106A",3
"lib1","SARS-CoV-2","TTTCTTAGAGGGGTTA",4,142.9,6,-4.76,2,1.5,1.18,0.01,">1 nonsynonymous","C6D N24S A81D E141R G152C R179S",6
"lib1","SARS-CoV-2","TTTCTTATATCTTGTG",5,41.57,10.01,-0.76,0.11,1.88,1.07,0.01,">1 nonsynonymous","P133D E186V",2
"lib1","SARS-CoV-2","TTTCTTATTAAGGTGG",2,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T N107E N157R",3
"lib1","SARS-CoV-2","TTTCTTCAAAAGGAGG",3,3234.53,6,-4.76,0.86,1.5,1.12,0,">1 nonsynonymous","S53G T140R Q176D",3
"lib1","SARS-CoV-2","TTTCTTCAACTGTAAT",2,39.63,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","S36F K56Q P82S W106H R127L T148Y P197Q",7
"lib1","SARS-CoV-2","TTTCTTCATAGTAGAT",3,75.29,8.12,-2.65,0.3,1.6,1.15,0.03,">1 nonsynonymous","A14V W23M",2
"lib1","SARS-CoV-2","TTTCTTCATGAATCTA",3,56.54,9.97,-0.8,0.07,2.84,1.03,0,">1 nonsynonymous","Y121L Y178M",2
"lib1","SARS-CoV-2","TTTCTTCCTCAAGAGG",3,17.32,6,-4.76,2,3,1.14,0.01,">1 nonsynonymous","V11R Y119S L162W",3
"lib1","SARS-CoV-2","TTTCTTCCTGCTAAAT",5,22.51,6,-4.76,2,3,1.1,0,">1 nonsynonymous","P96Q S113Q",2
"lib1","SARS-CoV-2","TTTCTTCTTTGTCAAA",2,13.55,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19V A67N W106G K128S D137K P149C",6
"lib1","SARS-CoV-2","TTTCTTGACAGGGCTT",10,227.79,10.84,0.08,0.05,2.9,1.05,0,">1 nonsynonymous","V37A T55S T148R",3
"lib1","SARS-CoV-2","TTTCTTGATAAGTTAT",3,54.7,9.5,-1.26,0.12,1.8,1.14,0,"1 nonsynonymous","R136P",1
"lib1","SARS-CoV-2","TTTCTTGATATGAGAT",3,34.7,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","C31A G86C D97G V173H",4
"lib1","SARS-CoV-2","TTTCTTGATTTACAGG",3,16.51,10.54,-0.22,0.12,3,1,0,"1 nonsynonymous","G155N",1
"lib1","SARS-CoV-2","TTTCTTGCCAGTGAAT",1,27.51,9.07,-1.7,0.1,2.86,1.14,0,">1 nonsynonymous","I28L T55G G166K",3
"lib1","SARS-CoV-2","TTTCTTGCTTTCTTTT",1,46.16,9.34,-1.42,0.09,2.49,1.14,0,">1 nonsynonymous","I28L N118L C195R",3
"lib1","SARS-CoV-2","TTTCTTGGAACCTGGA",4,24.71,10.51,-0.25,0.09,2.81,1.11,0,"1 nonsynonymous","K26A",1
"lib1","SARS-CoV-2","TTTCTTGGACACTCGA",1,22.73,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","V32K V103E",2
"lib1","SARS-CoV-2","TTTCTTTAAAATTTGA",1,25.7,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N64V G83P Y91H T170Y L187I",5
"lib1","SARS-CoV-2","TTTCTTTCTCCTCGAT",6,79.52,6,-4.76,1.96,1.5,1.19,0.01,">1 nonsynonymous","W106L Y165S",2
"lib1","SARS-CoV-2","TTTCTTTGCGAACACA",7,33.46,6,-4.76,2,1.5,1.1,0.01,">1 nonsynonymous","L60R V103F",2
"lib1","SARS-CoV-2","TTTCTTTTCCTTTTAA",3,74.71,6.24,-4.53,0.73,1.5,1.16,0.02,">1 nonsynonymous","N4L V11C N24H F99P K132R",5
"lib1","SARS-CoV-2","TTTGAAAAACTTTTAA",5,17.77,6.75,-4.01,0.66,1.5,1.23,0.06,">1 nonsynonymous","I2N N13F P82L",3
"lib1","SARS-CoV-2","TTTGAAAACTATATCA",14,88.19,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","C49H A67S E141R Y175N",4
"lib1","SARS-CoV-2","TTTGAAAACTGATTAT",6,24.73,6,-4.76,2,3,1.26,0.01,">1 nonsynonymous","W23L F167S V173S",3
"lib1","SARS-CoV-2","TTTGAAAATATTATAA",3,5.17,NA,NA,NA,NA,NA,NA,"stop","V71P F99* T170M T201Q",4
"lib1","SARS-CoV-2","TTTGAAACCGACTGTA",4,11.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49S K94R",2
"lib1","SARS-CoV-2","TTTGAAAGATCTTAAT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85D G101H",2
"lib1","SARS-CoV-2","TTTGAAAGCGTCCTCC",8,76.38,6.06,-4.7,1.12,1.5,1.11,0.03,">1 nonsynonymous","G9A G166W P177L",3
"lib1","SARS-CoV-2","TTTGAAAGTAACCGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S E135* N151Q",3
"lib1","SARS-CoV-2","TTTGAAATCACTTTTA",2,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76Y Y143L",2
"lib1","SARS-CoV-2","TTTGAAATCTACAGTA",1,8.62,6.99,-3.78,0.34,1.9,1.14,0.02,">1 nonsynonymous","D98I C102L P191S",3
"lib1","SARS-CoV-2","TTTGAAATGAAGGTGA",3,6.39,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F70A Q84V V103K K114R",4
"lib1","SARS-CoV-2","TTTGAAATTACGGGGC",1,18.2,6.24,-4.52,0.57,1.5,1.1,0.02,">1 nonsynonymous","L57N D90N R124P",3
"lib1","SARS-CoV-2","TTTGAAATTGACTGCC",3,22.64,8.36,-2.41,0.31,1.5,1,0.05,">1 nonsynonymous","K26L V37T N58K A81S D90T L122G",6
"lib1","SARS-CoV-2","TTTGAACAAATCCAAC",5,68.82,6,-4.76,2,1.5,1.15,0.02,">1 nonsynonymous","F62C F134N P177I",3
"lib1","SARS-CoV-2","TTTGAACACCACCGCG",3,0.3,NA,NA,NA,NA,NA,NA,"stop","F8S P82S Y91* F99I C102G",5
"lib1","SARS-CoV-2","TTTGAACACTCAAACG",2,1.03,NA,NA,NA,NA,NA,NA,"stop","F12M Y50C I88N P149T G172* V180M",6
"lib1","SARS-CoV-2","TTTGAACAGAGCATGC",3,75.49,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","S19L C31E A42D D90T",4
"lib1","SARS-CoV-2","TTTGAACATCCAGACC",3,32.54,9.98,-0.79,0.12,2.04,1,0.01,">1 nonsynonymous","L38I P54M Y178R",3
"lib1","SARS-CoV-2","TTTGAACCATAACCAA",4,46.37,9.11,-1.65,0.24,1.5,1.1,0.03,">1 nonsynonymous","F17E S36Y S41P N58V A105L Y143S",6
"lib1","SARS-CoV-2","TTTGAACCGTTCATTA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","P133T Y175*",2
"lib1","SARS-CoV-2","TTTGAACTGTAAGAAA",3,78.8,10.83,0.07,0.05,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGAAGAAAAAATAA",6,6.05,NA,NA,NA,NA,NA,NA,"stop","R16F N40*",2
"lib1","SARS-CoV-2","TTTGAAGAGTGAGCCT",10,110.29,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R73W D97H",2
"lib1","SARS-CoV-2","TTTGAAGATATATCAA",6,52.31,10.77,0.01,0.06,2.94,1.03,0,"1 nonsynonymous","G152D",1
"lib1","SARS-CoV-2","TTTGAAGCATTCTGAG",3,58.05,10.75,-0.02,0.06,2.96,1.02,0,"1 nonsynonymous","D97N",1
"lib1","SARS-CoV-2","TTTGAAGCTCTGCTGG",1,33.08,10.01,-0.76,0.14,2.25,1.07,0.01,">1 nonsynonymous","L38A S53T",2
"lib1","SARS-CoV-2","TTTGAAGTACTTGATG",5,0.64,NA,NA,NA,NA,NA,NA,"stop","P54S R136H S200*",3
"lib1","SARS-CoV-2","TTTGAAGTGCTCATAT",2,19.74,6,-4.76,2,2.95,1.13,0.01,">1 nonsynonymous","N64R K94W F134S P161L",4
"lib1","SARS-CoV-2","TTTGAATAAAACCTGT",7,53.27,6.75,-4.02,0.33,1.5,1.17,0.01,">1 nonsynonymous","T3C S108M N171I",3
"lib1","SARS-CoV-2","TTTGAATAAACAAGCG",1,23.23,10.66,-0.1,0.11,2.91,1.05,0.01,">1 nonsynonymous","I2T E186H",2
"lib1","SARS-CoV-2","TTTGAATAATACTTAG",6,66.19,10.65,-0.12,0.06,2.89,1.07,0,">1 nonsynonymous","P54A V173C",2
"lib1","SARS-CoV-2","TTTGAATAATTCTAAA",4,60.5,9.6,-1.17,0.11,2.09,1.07,0,">1 nonsynonymous","V37M L95T E141N K199S",4
"lib1","SARS-CoV-2","TTTGAATATCGCTAAG",2,103.55,10.73,-0.04,0.08,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGAATCGACTACAC",7,31.81,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","R16H L38C R179W",3
"lib1","SARS-CoV-2","TTTGAATCTCATCGAA",5,358.8,8.34,-2.43,0.15,2.31,1.11,0.01,">1 nonsynonymous","T100L Y119T Q176L",3
"lib1","SARS-CoV-2","TTTGAATCTTATTGAT",8,168.32,10.73,-0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGAATTATAACATA",1,5.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T S45L T140D",3
"lib1","SARS-CoV-2","TTTGACAGCTTCCCTG",2,32.96,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","R16T L38P D98S S108F Y119V",5
"lib1","SARS-CoV-2","TTTGACATAACCGGGA",1,10.78,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","A14H G51P",2
"lib1","SARS-CoV-2","TTTGACCAAACTCGAT",9,40.37,6,-4.76,2,1.5,1.22,0.03,">1 nonsynonymous","T100F K114E L183S",3
"lib1","SARS-CoV-2","TTTGACCACGGGCAGT",2,8.59,10.72,-0.05,0.31,2.81,1.12,0.05,"wildtype","",0
"lib1","SARS-CoV-2","TTTGACCCGTCCAGAG",6,11.71,6,-4.76,2,1.5,1.23,0.03,">1 nonsynonymous","T46S P82Q E141R",3
"lib1","SARS-CoV-2","TTTGACCCTCAAGCTG",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E T55D G116K",3
"lib1","SARS-CoV-2","TTTGACCGCCGATACA",3,21.34,6,-4.76,2,1.5,1.18,0.04,">1 nonsynonymous","F99I P149S F167A",3
"lib1","SARS-CoV-2","TTTGACCTAAACCCAT",9,138.58,6,-4.76,0.69,1.5,1.14,0.01,">1 nonsynonymous","G74I G83S N130S",3
"lib1","SARS-CoV-2","TTTGACCTAGCTTCGA",9,53.58,8.19,-2.57,0.13,1.56,1.1,0.01,">1 nonsynonymous","D90F N118L",2
"lib1","SARS-CoV-2","TTTGACCTCACACCCG",3,81.35,10.39,-0.38,0.04,2.92,1.04,0,"1 nonsynonymous","F156R",1
"lib1","SARS-CoV-2","TTTGACCTTGAAATTA",1,11.48,6,-4.76,2,1.5,1.06,0.02,">1 nonsynonymous","I28Q G86H",2
"lib1","SARS-CoV-2","TTTGACTAAAATTATC",4,50.21,9.88,-0.88,0.14,1.94,1.11,0.01,">1 nonsynonymous","G9T V37G Y93F",3
"lib1","SARS-CoV-2","TTTGACTAAATTAGCA",10,73.59,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","A18Y N92T Y121I",3
"lib1","SARS-CoV-2","TTTGACTATCACAGAA",5,26.59,10.73,-0.03,0.08,2.78,1.18,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGACTATGTCTATA",9,64.11,6.09,-4.67,0.56,1.5,1.12,0.01,">1 nonsynonymous","D68S A89I L131E",3
"lib1","SARS-CoV-2","TTTGACTCCAACACTC",2,58.03,10.83,0.07,0.1,2.81,1.04,0,">1 nonsynonymous","T140S S200N",2
"lib1","SARS-CoV-2","TTTGACTTATATGGTT",3,83.07,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V77G G83A N120I Y165N",4
"lib1","SARS-CoV-2","TTTGAGAAACGCTTTG",2,9.62,6.04,-4.72,1.33,1.5,1.1,0.04,">1 nonsynonymous","C49R I88M T100Y R127P",4
"lib1","SARS-CoV-2","TTTGAGAATATGACTT",6,651.33,10.03,-0.74,0.08,2.48,1.03,0,">1 nonsynonymous","P7T K132W T140S",3
"lib1","SARS-CoV-2","TTTGAGAATCAGGACA",5,81.22,10.76,0,0.07,2.95,1.01,0,"1 nonsynonymous","G83K",1
"lib1","SARS-CoV-2","TTTGAGAATCGTTACC",4,43,10.35,-0.42,0.06,2.96,1,0,"1 nonsynonymous","F156L",1
"lib1","SARS-CoV-2","TTTGAGACCAGCAGTA",1,53.84,6,-4.76,2,3,1.17,0,">1 nonsynonymous","N24R Y66C A81S Y165G",4
"lib1","SARS-CoV-2","TTTGAGATACGCTAAG",7,121.02,10.58,-0.19,0.06,2.9,1.06,0,"1 nonsynonymous","V115M",1
"lib1","SARS-CoV-2","TTTGAGATTAAACTAA",1,11.99,9.97,-0.8,0.1,2.46,1.04,0.01,">1 nonsynonymous","P7V G83K P149C",3
"lib1","SARS-CoV-2","TTTGAGCCACTTCCCA",7,70.71,10.57,-0.19,0.08,2.72,1.09,0,"1 nonsynonymous","T3I",1
"lib1","SARS-CoV-2","TTTGAGCCATAAACGC",3,41.94,10.7,-0.07,0.07,2.92,1.03,0,">1 nonsynonymous","V37R F62C",2
"lib1","SARS-CoV-2","TTTGAGCCGACCAAAA",8,32.28,6,-4.76,2,1.5,1.08,0,">1 nonsynonymous","V65R Q84R L95F T148Y",4
"lib1","SARS-CoV-2","TTTGAGGCACGTTAAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A81K A89L Y165*",3
"lib1","SARS-CoV-2","TTTGAGGCCGTATGAT",1,17.11,10.09,-0.67,0.08,2.95,1,0,">1 nonsynonymous","R136K F156K",2
"lib1","SARS-CoV-2","TTTGAGGCGCTTATGG",5,8.91,6,-4.76,2,1.5,1.14,0.05,">1 nonsynonymous","V77W Q84I P96M I104M",4
"lib1","SARS-CoV-2","TTTGAGGTATCGGCAA",5,105.92,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","V37P C61P F99S",3
"lib1","SARS-CoV-2","TTTGAGTTCGAAAATT",8,134.54,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","I2T G172L",2
"lib1","SARS-CoV-2","TTTGAGTTCTTACCCA",4,124.2,10.77,0,0.06,2.93,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGATAAAACTGCAT",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66V D90T Y119K T140I G146D",5
"lib1","SARS-CoV-2","TTTGATAAATACATCC",1,0.59,NA,NA,NA,NA,NA,NA,"stop","G51* N110D",2
"lib1","SARS-CoV-2","TTTGATAATGCGAAAC",1,47.29,10.35,-0.41,0.05,2.86,1.05,0,">1 nonsynonymous","P7G K48L",2
"lib1","SARS-CoV-2","TTTGATAGAGAGTAGT",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T E141K",2
"lib1","SARS-CoV-2","TTTGATAGAGGCACAA",9,119.22,10.74,-0.02,0.06,2.9,1.05,0,">1 nonsynonymous","L5T G51N D97N",3
"lib1","SARS-CoV-2","TTTGATAGCGTCCCGT",3,39.94,10.24,-0.53,0.12,2.16,1.05,0.01,"1 nonsynonymous","L95T",1
"lib1","SARS-CoV-2","TTTGATATATAAATGC",5,46.41,10.15,-0.61,0.09,2.54,1.03,0,"1 nonsynonymous","Y91R",1
"lib1","SARS-CoV-2","TTTGATCATGTAACGG",1,23.87,10.63,-0.14,0.06,2.94,1,0,">1 nonsynonymous","K94H L125M P149Q",3
"lib1","SARS-CoV-2","TTTGATCCAAAAAGCA",4,37.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","N40T L60K Y91G F134P Y159N",5
"lib1","SARS-CoV-2","TTTGATCCACAAACCA",7,105.8,10.78,0.01,0.05,2.85,1.06,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGATCGCAATGGCA",1,22.97,10.23,-0.53,0.05,2.92,1,0,"1 nonsynonymous","Y35E",1
"lib1","SARS-CoV-2","TTTGATCTTAGCCGTA",3,62.01,9.42,-1.34,0.2,1.61,1.17,0.02,"1 nonsynonymous","D137A",1
"lib1","SARS-CoV-2","TTTGATGACACGAAAT",4,13.57,9.99,-0.77,0.17,2.59,1,0.01,">1 nonsynonymous","A14C T63Y",2
"lib1","SARS-CoV-2","TTTGATGAGCTGCCAC",1,6.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L P96R N120S",3
"lib1","SARS-CoV-2","TTTGATGGTTTATGAA",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T G117V",2
"lib1","SARS-CoV-2","TTTGATGTAAGTTGGA",5,37.61,10.82,0.06,0.08,2.95,1,0,"1 nonsynonymous","L5S",1
"lib1","SARS-CoV-2","TTTGATTACTGAGGCC",3,43.73,6.09,-4.67,1.08,1.5,1.19,0.04,">1 nonsynonymous","Y35R N64E Q84T S108M",4
"lib1","SARS-CoV-2","TTTGATTAGAGCCAAC",3,78.9,10.55,-0.21,0.05,2.9,1.05,0,">1 nonsynonymous","S19A V37M",2
"lib1","SARS-CoV-2","TTTGATTATACAAAAT",2,12.68,10.23,-0.53,0.09,2.89,1,0,">1 nonsynonymous","L60M Y143L",2
"lib1","SARS-CoV-2","TTTGATTATTATTCTC",6,1774.13,6,-4.76,2,1.5,1.14,0,">1 nonsynonymous","V37D G86E D98I V173G Q176P",5
"lib1","SARS-CoV-2","TTTGATTGAAACCAAC",1,25.24,6.1,-4.67,0.76,1.5,1.05,0.02,">1 nonsynonymous","W23E Y119R E154N",3
"lib1","SARS-CoV-2","TTTGATTTAACTATTA",1,19.52,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","I28T Y35D D90N W106R G172I Y175H",6
"lib1","SARS-CoV-2","TTTGATTTATCCCATT",10,155.03,6,-4.76,2,1.5,1.21,0.01,">1 nonsynonymous","V11R T55S C61M A105M Y165S A190M",6
"lib1","SARS-CoV-2","TTTGATTTGTGATTGA",7,170.49,10.72,-0.04,0.05,2.92,1.04,0,"1 nonsynonymous","G9A",1
"lib1","SARS-CoV-2","TTTGCAAAATACGGCA",5,26.46,6,-4.76,2,3,1.23,0.01,">1 nonsynonymous","G9W N107T K128Q A145T F160Q",5
"lib1","SARS-CoV-2","TTTGCAAACTATCGTC",1,101.75,10.48,-0.28,0.05,2.97,1,0,">1 nonsynonymous","I2F K56F",2
"lib1","SARS-CoV-2","TTTGCAAATAGTACGG",10,43.53,6,-4.76,0.67,3,1.24,0.01,">1 nonsynonymous","A33V N92H E154G",3
"lib1","SARS-CoV-2","TTTGCAACAGGCCGTT",2,51.14,6.11,-4.66,0.76,1.5,1.11,0.02,">1 nonsynonymous","G51R N58I R73L G86S P161F G174Q",6
"lib1","SARS-CoV-2","TTTGCACAAGTGGTAA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","A14L I88* P133L T201M",4
"lib1","SARS-CoV-2","TTTGCACACTGAGAAA",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T C61W G101L K114S G146L",5
"lib1","SARS-CoV-2","TTTGCACATATAGAAT",2,7.77,6,-4.76,2,3,1.13,0.01,">1 nonsynonymous","T46V N92K S184N",3
"lib1","SARS-CoV-2","TTTGCACTGATCAAAT",7,23.09,9.22,-1.54,0.18,1.65,1.12,0.01,">1 nonsynonymous","T15V F99L",2
"lib1","SARS-CoV-2","TTTGCAGAGACCTTGA",6,33.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T I72Q Q84R",3
"lib1","SARS-CoV-2","TTTGCAGCACAGGAAA",3,117.71,10.66,-0.11,0.06,2.89,1.04,0,">1 nonsynonymous","I2G S164E",2
"lib1","SARS-CoV-2","TTTGCAGGAGAGGTAT",2,1.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25V",1
"lib1","SARS-CoV-2","TTTGCAGGCTATAATG",1,54.76,8.99,-1.78,0.16,1.78,1.16,0.01,">1 nonsynonymous","I2G Y66R G155C",3
"lib1","SARS-CoV-2","TTTGCAGGTACCTTAG",5,152.48,7.73,-3.03,0.21,1.63,1.16,0.01,">1 nonsynonymous","R16G Q176V",2
"lib1","SARS-CoV-2","TTTGCAGTAATAAAAT",3,3.23,NA,NA,NA,NA,NA,NA,"stop","L60* G152C",2
"lib1","SARS-CoV-2","TTTGCATCGAATCCCC",2,30.96,10.64,-0.12,0.06,2.93,1,0,">1 nonsynonymous","L5R P169T",2
"lib1","SARS-CoV-2","TTTGCCAAAACCCGGG",2,76.62,10.76,0,0.05,2.92,1.02,0,">1 nonsynonymous","F44R P197L",2
"lib1","SARS-CoV-2","TTTGCCAAAAGTGAAA",6,31.95,6,-4.76,2,1.5,1.11,0.03,">1 nonsynonymous","R127T G146W",2
"lib1","SARS-CoV-2","TTTGCCAAATTAAAGC",2,475.85,6,-4.76,2,1.5,1.17,0.01,">1 nonsynonymous","N24T V103T S113I T148K C158V",5
"lib1","SARS-CoV-2","TTTGCCAACACCTAAT",1,13.79,8.79,-1.97,0.26,1.5,1,0.03,">1 nonsynonymous","P82S K132L S164H K198E",4
"lib1","SARS-CoV-2","TTTGCCAACCCTTACC",5,51.58,10.64,-0.13,0.03,2.93,1.03,0,">1 nonsynonymous","Y39Q F160L T201Q",3
"lib1","SARS-CoV-2","TTTGCCACAGCCAACT",11,245.21,8.48,-2.28,0.15,2.03,1.12,0.01,">1 nonsynonymous","I104S G166V S200E",3
"lib1","SARS-CoV-2","TTTGCCACCAATCTCC",3,83.77,9.05,-1.71,0.14,2.13,1.15,0.01,">1 nonsynonymous","L5V D97P T100C E154L P161S",5
"lib1","SARS-CoV-2","TTTGCCATTAATATTA",1,13.67,7.95,-2.81,0.47,1.5,1,0.07,">1 nonsynonymous","K56P F70S N151L",3
"lib1","SARS-CoV-2","TTTGCCCCTATAATAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138E",1
"lib1","SARS-CoV-2","TTTGCCGCTCACCTCT",1,12.22,10.17,-0.59,0.16,2.75,1,0.01,">1 nonsynonymous","Y123Q P149T",2
"lib1","SARS-CoV-2","TTTGCCGTTAAAACCA",3,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H A67H",2
"lib1","SARS-CoV-2","TTTGCCGTTAGCATCT",4,96.42,10.44,-0.32,0.05,2.87,1.02,0,">1 nonsynonymous","A14H P54M",2
"lib1","SARS-CoV-2","TTTGCCTAAACCACGA",6,52.14,8.26,-2.5,0.37,1.5,1,0.05,">1 nonsynonymous","L5R P82M D90L",3
"lib1","SARS-CoV-2","TTTGCCTACATTACAA",3,29.24,8.41,-2.35,0.14,1.87,1.07,0.01,">1 nonsynonymous","D97L N107A Y119R T148G T201G",5
"lib1","SARS-CoV-2","TTTGCCTACTAAGTGC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119Q D137V",3
"lib1","SARS-CoV-2","TTTGCCTCTAGTAAAG",15,89.88,9.85,-0.91,0.28,1.5,1.08,0.03,">1 nonsynonymous","D59S W106G",2
"lib1","SARS-CoV-2","TTTGCGAAAGCCTAAA",7,102.77,9.67,-1.09,0.14,1.9,1.07,0.01,">1 nonsynonymous","L95T V173A K199W",3
"lib1","SARS-CoV-2","TTTGCGAATAAAAAAG",1,46.58,9.88,-0.89,0.06,2.81,1.02,0,">1 nonsynonymous","T15D N58M G155T",3
"lib1","SARS-CoV-2","TTTGCGAGTCTAACTA",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56P S108P E154N",3
"lib1","SARS-CoV-2","TTTGCGATGAATTGAC",4,47.8,7.77,-2.99,0.4,1.5,1.02,0.07,">1 nonsynonymous","Y66E G86D Y93F F99K",4
"lib1","SARS-CoV-2","TTTGCGATTGAACGAA",9,78.44,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","S69G A81I",2
"lib1","SARS-CoV-2","TTTGCGCACTAGTGGT",1,54.68,10.42,-0.34,0.06,2.93,1.07,0,"1 nonsynonymous","Y35T",1
"lib1","SARS-CoV-2","TTTGCGCGCATTATCC",2,43.16,10.75,-0.01,0.05,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGCGCTACTGGAAA",1,21.73,10.03,-0.73,0.16,2.34,1.1,0.01,">1 nonsynonymous","S29W A42T N110P",3
"lib1","SARS-CoV-2","TTTGCGCTATGACTCA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","F8M R27I F44D N157L G172*",5
"lib1","SARS-CoV-2","TTTGCGGGATAAAAGT",1,32.02,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","C31L N58P Y93C Y159V",4
"lib1","SARS-CoV-2","TTTGCGGTCCGGCCCC",1,0.55,NA,NA,NA,NA,NA,NA,"stop","S19G I72* Y93S Y119T F156I",5
"lib1","SARS-CoV-2","TTTGCGTCACATCAGG",1,56.36,10.73,-0.04,0.07,2.93,1.04,0,">1 nonsynonymous","C61T V65I T201P",3
"lib1","SARS-CoV-2","TTTGCTAACATAATAA",5,60.22,10.41,-0.35,0.05,2.94,1.03,0,">1 nonsynonymous","R16S G174L",2
"lib1","SARS-CoV-2","TTTGCTAACCGATTTA",1,11.44,6.1,-4.66,1.31,1.67,1.2,0.07,">1 nonsynonymous","A42R C49L N64A D98V R127I",5
"lib1","SARS-CoV-2","TTTGCTAAGAACCATA",2,6.81,10.7,-0.06,0.08,2.93,1.1,0,"1 nonsynonymous","P149C",1
"lib1","SARS-CoV-2","TTTGCTAATACAAGGC",2,24.76,6,-4.76,2,3,1.25,0.01,">1 nonsynonymous","D34L L95M A145V C150E",4
"lib1","SARS-CoV-2","TTTGCTAGATCAAGTA",5,108.79,9.96,-0.8,0.05,2.8,1.05,0,"1 nonsynonymous","N118S",1
"lib1","SARS-CoV-2","TTTGCTATCAGCATGC",6,23.08,9.67,-1.1,0.31,1.5,1.07,0.04,">1 nonsynonymous","I2R N30G Y50V",3
"lib1","SARS-CoV-2","TTTGCTATTTCATCCG",3,2.2,NA,NA,NA,NA,NA,NA,"stop","S53* N107E Y143K V173I",4
"lib1","SARS-CoV-2","TTTGCTCCATAATTAA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","K48N E141S L187P K198*",4
"lib1","SARS-CoV-2","TTTGCTCGTTTCGGCT",6,66.45,9.74,-1.02,0.12,2.46,1.05,0.01,"1 nonsynonymous","C6Y",1
"lib1","SARS-CoV-2","TTTGCTGAAAAAAGAT",3,111.84,10.09,-0.67,0.09,2.04,1.02,0,">1 nonsynonymous","L5D G51N W106T",3
"lib1","SARS-CoV-2","TTTGCTGTAATAATTA",8,183.03,10.47,-0.29,0.05,2.87,1.07,0,">1 nonsynonymous","I2N Q144H",2
"lib1","SARS-CoV-2","TTTGCTTAAACAACAA",4,0,NA,NA,NA,NA,NA,NA,"stop","S19T Q84*",2
"lib1","SARS-CoV-2","TTTGCTTAACCGGATG",8,87.55,8.78,-1.99,0.1,2.64,1.13,0.01,">1 nonsynonymous","A33F G83Y S113W",3
"lib1","SARS-CoV-2","TTTGCTTGGAATCTAG",2,1.57,NA,NA,NA,NA,NA,NA,"stop","T63A S69R W106A K132*",4
"lib1","SARS-CoV-2","TTTGCTTGTAAACAGA",1,9.05,10.37,-0.4,0.11,2.95,1.08,0,">1 nonsynonymous","S29C V37K D97T",3
"lib1","SARS-CoV-2","TTTGGAAAACTCCGCT",3,63.62,9.78,-0.98,0.21,1.89,1.06,0.02,">1 nonsynonymous","A89I F126L",2
"lib1","SARS-CoV-2","TTTGGAAATCCTCTAC",6,54.78,6.15,-4.61,1.05,1.5,1.3,0.04,">1 nonsynonymous","G83V Y165I",2
"lib1","SARS-CoV-2","TTTGGAAATTCAAAGT",4,0.95,NA,NA,NA,NA,NA,NA,"stop","E10S C49L N118D P197*",4
"lib1","SARS-CoV-2","TTTGGAACAAATTCTG",2,35.64,6.15,-4.62,1.1,1.5,1.19,0.03,">1 nonsynonymous","N118R N171D",2
"lib1","SARS-CoV-2","TTTGGAACCCCATGAC",1,13.4,9.91,-0.85,0.23,2.03,1,0.02,">1 nonsynonymous","K56V F99M",2
"lib1","SARS-CoV-2","TTTGGAACGCGCTCAA",1,1.98,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib1","SARS-CoV-2","TTTGGAATATACCAAT",5,55.6,7.92,-2.85,0.32,1.5,1.05,0.03,">1 nonsynonymous","Y35S Y121S P149L",3
"lib1","SARS-CoV-2","TTTGGAATTTCATCTG",4,73.56,10.71,-0.06,0.05,2.9,1.09,0,">1 nonsynonymous","I2L G83Y T201K",3
"lib1","SARS-CoV-2","TTTGGACATACTATCT",1,46.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V S45I V52N N130Q",4
"lib1","SARS-CoV-2","TTTGGACATACTTGAC",5,1.28,NA,NA,NA,NA,NA,NA,"stop","P149R Q168*",2
"lib1","SARS-CoV-2","TTTGGACATGTGCATA",3,92.27,10.59,-0.18,0.05,2.86,1.08,0,">1 nonsynonymous","N40A N64C E154Q",3
"lib1","SARS-CoV-2","TTTGGACATTTGCGGC",3,17.67,9.47,-1.29,0.28,1.5,1.01,0.05,">1 nonsynonymous","N13G S139F A190R",3
"lib1","SARS-CoV-2","TTTGGACCTAAGATCA",2,35.41,6.31,-4.46,0.39,1.5,1.1,0.01,">1 nonsynonymous","V11H Y21W L38A L95S W106Q G146L Q176T S184I",8
"lib1","SARS-CoV-2","TTTGGACTAGACATTA",2,16.12,6.74,-4.02,0.53,1.5,1.22,0.05,">1 nonsynonymous","S53A P82G P191T",3
"lib1","SARS-CoV-2","TTTGGAGGACAGGAGT",6,75.15,10.5,-0.27,0.06,2.88,1.06,0,"1 nonsynonymous","Q144V",1
"lib1","SARS-CoV-2","TTTGGAGGCTAGCAGC",3,113.16,8.67,-2.1,0.1,2.86,1.13,0,"1 nonsynonymous","N171R",1
"lib1","SARS-CoV-2","TTTGGATAATACAATG",3,21.99,6.38,-4.39,0.5,1.5,1.16,0.02,"1 nonsynonymous","C158L",1
"lib1","SARS-CoV-2","TTTGGATGAAGTACCC",3,36.81,6,-4.76,1.49,1.5,1.23,0.04,">1 nonsynonymous","W23G L122N S129A",3
"lib1","SARS-CoV-2","TTTGGATGCAAGCTAA",5,26.42,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","E10I D68A",2
"lib1","SARS-CoV-2","TTTGGATGCGGTTTGA",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S W106P P149Q K199H",4
"lib1","SARS-CoV-2","TTTGGATGTATAGCAA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","N92L S139* V181T V194I",4
"lib1","SARS-CoV-2","TTTGGATGTGCCAAAA",4,39.91,7.96,-2.8,0.36,1.5,1,0.07,">1 nonsynonymous","C31W K48A L95Y S113R N120R",5
"lib1","SARS-CoV-2","TTTGGCAAAATTATCG",1,4.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136T",1
"lib1","SARS-CoV-2","TTTGGCAATAAGTCCA",2,91.25,10.54,-0.23,0.04,2.93,1.02,0,">1 nonsynonymous","F8L E141A E186S",3
"lib1","SARS-CoV-2","TTTGGCAGAGGGCTAA",1,7.81,6,-4.76,2,1.5,1.27,0.07,">1 nonsynonymous","S29F S41I G117F F126E",4
"lib1","SARS-CoV-2","TTTGGCCTGATCTAGA",5,13.6,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","N13A V20H T46F K56L Y123A G146W F156S P197H",8
"lib1","SARS-CoV-2","TTTGGCGTATTCTATG",1,32.79,6,-4.76,2,1.5,1.24,0.02,"1 nonsynonymous","I80Q",1
"lib1","SARS-CoV-2","TTTGGCTAATCGAGCA",6,31.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S69R V103G",2
"lib1","SARS-CoV-2","TTTGGCTCTTTTTATA",1,12.46,7.27,-3.49,0.32,1.5,1.28,0.04,">1 nonsynonymous","F44I A67I I88M G166S",4
"lib1","SARS-CoV-2","TTTGGGAGAGCTCACA",7,126.96,10.55,-0.21,0.04,2.89,1.04,0,"1 nonsynonymous","G155T",1
"lib1","SARS-CoV-2","TTTGGGCAGTATATGT",3,83.63,10.31,-0.45,0.08,2.81,1.06,0,"1 nonsynonymous","P169Y",1
"lib1","SARS-CoV-2","TTTGGGGGATGTAAGT",4,9.24,6,-4.76,2,1.5,1.29,0.04,">1 nonsynonymous","C6A G146L F156Y",3
"lib1","SARS-CoV-2","TTTGGGGGTATAGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A V103L I142R",3
"lib1","SARS-CoV-2","TTTGGGTATACCGGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C A42P R124I G152S",4
"lib1","SARS-CoV-2","TTTGGGTATTTAGAAC",7,92.17,6,-4.76,2,3,1.22,0,">1 nonsynonymous","S45W V65M C150N",3
"lib1","SARS-CoV-2","TTTGGGTGATAGTGGC",1,28.27,10.74,-0.03,0.08,2.92,1.02,0,"1 nonsynonymous","T63V",1
"lib1","SARS-CoV-2","TTTGGTAATTTAACTC",3,110.82,10.69,-0.07,0.05,2.89,1.09,0,"1 nonsynonymous","K128Y",1
"lib1","SARS-CoV-2","TTTGGTACAATAAATT",1,40.13,7.07,-3.69,0.31,1.61,1.26,0.02,">1 nonsynonymous","N107L K132Y",2
"lib1","SARS-CoV-2","TTTGGTACCCCCAGTA",6,36.4,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","G86D Y93H T170A",3
"lib1","SARS-CoV-2","TTTGGTAGAAAAAAAT",4,35.69,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","Y93R G155S G172P",3
"lib1","SARS-CoV-2","TTTGGTCCCAACACGC",11,139.64,10.76,-0.01,0.07,2.89,1.07,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGGTCCCTCCAAAT",1,12.54,10.58,-0.18,0.07,2.95,1,0,"1 nonsynonymous","N40L",1
"lib1","SARS-CoV-2","TTTGGTCGTCAACTCA",16,67.65,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","N40I G86K N118D P191V",4
"lib1","SARS-CoV-2","TTTGGTGCAACAAAAA",1,23.97,10.86,0.1,0.08,2.82,1.13,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGGTGCAACGCGGA",4,1.89,NA,NA,NA,NA,NA,NA,"stop","N64Y D97L G146* C150F",4
"lib1","SARS-CoV-2","TTTGGTGGGTTATTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","P54* D98I I138L K199M",4
"lib1","SARS-CoV-2","TTTGGTTACTGCAGTA",7,148.09,9.96,-0.8,0.09,2.24,1.04,0,">1 nonsynonymous","A33K N40P",2
"lib1","SARS-CoV-2","TTTGGTTCATTTATAC",2,47.18,6,-4.76,2,1.5,1.26,0.03,">1 nonsynonymous","I28T N64Y G86Y P133L C158I",5
"lib1","SARS-CoV-2","TTTGGTTCGCTAATAT",4,2.21,NA,NA,NA,NA,NA,NA,"stop","A14T V32* K94H K132L S147P",5
"lib1","SARS-CoV-2","TTTGGTTTATTGTCCC",2,19.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S A14I K48R L60V L95P",5
"lib1","SARS-CoV-2","TTTGGTTTCTGAATGA",3,47.65,10.74,-0.03,0.05,2.89,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTGTAAAAACAACGA",1,46.07,10.64,-0.13,0.06,2.94,1.02,0,">1 nonsynonymous","I2G S164E",2
"lib1","SARS-CoV-2","TTTGTAAAAGATTACA",4,9.06,9.28,-1.49,0.19,2.49,1.08,0.01,">1 nonsynonymous","N13F T63V Y121L",3
"lib1","SARS-CoV-2","TTTGTAAACAGCATCC",2,29.14,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","T55S D68W G83F",3
"lib1","SARS-CoV-2","TTTGTAAACCCTTTCA",4,4.06,NA,NA,NA,NA,NA,NA,"stop","T63* G146*",2
"lib1","SARS-CoV-2","TTTGTAAATTTCCAGC",4,32.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L38P Y91W S108T S139A T201W",5
"lib1","SARS-CoV-2","TTTGTAACAGAGCCCT",7,126.28,10.08,-0.68,0.06,2.79,1.04,0,">1 nonsynonymous","C31T L60T",2
"lib1","SARS-CoV-2","TTTGTAACCAGCGACA",3,24.9,6.24,-4.53,0.54,1.94,1.14,0.01,">1 nonsynonymous","A89M N118Y C150D",3
"lib1","SARS-CoV-2","TTTGTAACTATAAATA",2,68.14,6.03,-4.73,0.91,1.5,1.13,0.02,">1 nonsynonymous","D68R N151L Y175R",3
"lib1","SARS-CoV-2","TTTGTAACTCTCATTT",3,54.39,7.1,-3.67,0.25,1.5,1.18,0.02,">1 nonsynonymous","N118A P133G T170L",3
"lib1","SARS-CoV-2","TTTGTAAGATCAATTG",1,24.51,7.93,-2.84,0.12,1.91,1.09,0.01,">1 nonsynonymous","C31V Y119I G146S",3
"lib1","SARS-CoV-2","TTTGTAAGCAACTACT",1,10.21,9.9,-0.87,0.13,2.72,1.03,0,">1 nonsynonymous","F12L V37I T170W",3
"lib1","SARS-CoV-2","TTTGTAATACACAGAA",2,6.93,6,-4.76,1.36,3,1.11,0.01,">1 nonsynonymous","L38R T55F Y143H F160G",4
"lib1","SARS-CoV-2","TTTGTACAACACTCAT",2,28.95,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A18S R25L Y93C V194I",4
"lib1","SARS-CoV-2","TTTGTACATTTAGGCA",7,42.19,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","E135P",1
"lib1","SARS-CoV-2","TTTGTAGCGCCACCAC",9,211.9,8.4,-2.36,0.14,2.26,1.1,0.01,">1 nonsynonymous","T55I N157Y",2
"lib1","SARS-CoV-2","TTTGTATAAACGTCTA",1,58.75,10.67,-0.09,0.07,2.87,1.09,0,"1 nonsynonymous","N64W",1
"lib1","SARS-CoV-2","TTTGTATAATTGCTCT",3,80.41,8.21,-2.55,0.27,1.5,1.16,0.02,">1 nonsynonymous","V11N Y121I",2
"lib1","SARS-CoV-2","TTTGTATGTTGGAGCA",6,38.35,10.43,-0.33,0.08,2.82,1,0,">1 nonsynonymous","N13M T201G",2
"lib1","SARS-CoV-2","TTTGTCAACGTGTTTA",1,15.18,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","F47N V103R S113T V173S",4
"lib1","SARS-CoV-2","TTTGTCAATCACTGAA",1,20.01,10.29,-0.47,0.11,2.88,1.03,0.01,">1 nonsynonymous","D98Y A190Y",2
"lib1","SARS-CoV-2","TTTGTCACACCGACCC",2,68.45,7.88,-2.88,0.19,1.6,1.13,0.01,">1 nonsynonymous","P96H G166E",2
"lib1","SARS-CoV-2","TTTGTCATACTGTAGG",2,68.63,8.14,-2.63,0.16,2.28,1.14,0.01,"1 nonsynonymous","Y175K",1
"lib1","SARS-CoV-2","TTTGTCCAAGATGCGT",4,29.1,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","V71Y F185N",2
"lib1","SARS-CoV-2","TTTGTCCGCTATTGGG",4,29.19,6,-4.76,0.66,1.5,1.09,0,">1 nonsynonymous","Y91D N118K S164H",3
"lib1","SARS-CoV-2","TTTGTCCTAGGTAGGC",3,90.17,10.51,-0.25,0.03,2.9,1.03,0,"1 nonsynonymous","D90T",1
"lib1","SARS-CoV-2","TTTGTCCTCTTAGTAG",3,22.85,7.44,-3.33,0.28,1.5,1.11,0.02,">1 nonsynonymous","G83D S113H",2
"lib1","SARS-CoV-2","TTTGTCGACCACAGGG",5,88.76,10.73,-0.04,0.05,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTGTCGACGCTTTTT",1,7.98,8.25,-2.51,0.2,2.58,1.11,0.02,">1 nonsynonymous","I2E N157C",2
"lib1","SARS-CoV-2","TTTGTCGCAACACTCA",5,1.55,NA,NA,NA,NA,NA,NA,"stop","V77G F134V P197*",3
"lib1","SARS-CoV-2","TTTGTCGGATTATAGT",5,10.41,NA,NA,NA,NA,NA,NA,"stop","R27* L38K A105V T148F C158V T201R",6
"lib1","SARS-CoV-2","TTTGTCGTTTGTCGAC",6,47.77,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","R27W V77F P169L V173S",4
"lib1","SARS-CoV-2","TTTGTCTACATCATAT",3,18.68,10.93,0.17,0.11,2.91,1,0,">1 nonsynonymous","T55E L131V",2
"lib1","SARS-CoV-2","TTTGTCTCAGAGACAT",3,69.12,8.69,-2.08,0.11,2.22,1.1,0.01,"1 nonsynonymous","N107L",1
"lib1","SARS-CoV-2","TTTGTCTCCTAAACAT",7,72.79,6,-4.76,0.86,1.5,1.17,0,">1 nonsynonymous","F62L A105R T148N P161G",4
"lib1","SARS-CoV-2","TTTGTCTGAGCTAAGG",2,5.43,6,-4.76,2,3,1.19,0.01,">1 nonsynonymous","K94G R136P T148L",3
"lib1","SARS-CoV-2","TTTGTGAATAACTAGG",1,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K Y35T P54V",3
"lib1","SARS-CoV-2","TTTGTGATGTTGAATA",5,53.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L G9L Y93T Y123K P161C",5
"lib1","SARS-CoV-2","TTTGTGCAGAACTTGG",2,79.12,8.43,-2.33,0.13,2.37,1.1,0.01,">1 nonsynonymous","I2K E10P Y143E",3
"lib1","SARS-CoV-2","TTTGTGCCAATGGGAT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","E10G Y93* P133N G152D",4
"lib1","SARS-CoV-2","TTTGTGTACTTGCTAT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","L131* Y143M V153D",3
"lib1","SARS-CoV-2","TTTGTGTTGTATGTAA",2,23.72,6,-4.76,2,1.5,1.19,0.02,"1 nonsynonymous","R124D",1
"lib1","SARS-CoV-2","TTTGTTAAAATCTTTA",1,19.07,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","K26P S53W",2
"lib1","SARS-CoV-2","TTTGTTAACGGACGTA",4,61.66,9.5,-1.26,0.1,1.94,1.14,0,">1 nonsynonymous","F12S F62W",2
"lib1","SARS-CoV-2","TTTGTTACTAGTAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123H F156V",2
"lib1","SARS-CoV-2","TTTGTTATAACGAGAC",3,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A N130K",2
"lib1","SARS-CoV-2","TTTGTTATAGGTTACA",3,18.94,6,-4.76,2,1.5,1.21,0.04,">1 nonsynonymous","I2E G86N N118P",3
"lib1","SARS-CoV-2","TTTGTTATGAAGCGTT",9,0.36,NA,NA,NA,NA,NA,NA,"stop","K132* E154A T201M",3
"lib1","SARS-CoV-2","TTTGTTATGCTAACGC",2,58.92,6,-4.76,2,1.5,1.25,0.01,">1 nonsynonymous","N40G Q84M D90E D97P D112S R136H Y178H",7
"lib1","SARS-CoV-2","TTTGTTCAATTAAGGT",6,77.68,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","K87M F134E Y159A",3
"lib1","SARS-CoV-2","TTTGTTCATTCTGTGG",1,43.3,9.82,-0.94,0.06,2.81,1.05,0,"1 nonsynonymous","Y165H",1
"lib1","SARS-CoV-2","TTTGTTCCACCTACTA",1,10.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19M V115F E141I E154D",4
"lib1","SARS-CoV-2","TTTGTTCGCGCCATCT",4,82.07,10.06,-0.7,0.06,2.79,1.02,0,">1 nonsynonymous","G155I K198I",2
"lib1","SARS-CoV-2","TTTGTTCTCCAAATAA",4,55.17,10.28,-0.48,0.07,2.77,1,0,"1 nonsynonymous","A22V",1
"lib1","SARS-CoV-2","TTTGTTCTTTCTTGGC",3,36.27,6,-4.76,2,3,1.19,0,">1 nonsynonymous","R127T G174F",2
"lib1","SARS-CoV-2","TTTGTTGCGCCACTTT",2,27.15,10.45,-0.31,0.27,2.12,1.11,0.03,">1 nonsynonymous","E76A F134T",2
"lib1","SARS-CoV-2","TTTGTTGGAGTCAACT",2,37.9,9.4,-1.36,0.16,1.6,1.14,0.01,"1 nonsynonymous","Y50C",1
"lib1","SARS-CoV-2","TTTGTTGGTATACCTG",7,71.42,9.18,-1.59,0.07,2.85,1.09,0,">1 nonsynonymous","I2Y T170C",2
"lib1","SARS-CoV-2","TTTGTTTGAGTGGGCC",5,43.35,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V20M V37F L95C",3
"lib1","SARS-CoV-2","TTTTAAAAAAACCATC",2,38.09,10.31,-0.46,0.04,2.93,1.02,0,">1 nonsynonymous","Y35A E141R F160Y",3
"lib1","SARS-CoV-2","TTTTAAAAAACGATGA",1,37.98,6,-4.76,2,1.5,1.13,0.01,">1 nonsynonymous","N92L N107E P149Q",3
"lib1","SARS-CoV-2","TTTTAAAAAGAGTTAG",1,26.59,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V77E V103L Y119D",3
"lib1","SARS-CoV-2","TTTTAAAAATAGGAAA",4,45.94,10.76,0,0.06,2.93,1.04,0,"1 nonsynonymous","S43A",1
"lib1","SARS-CoV-2","TTTTAAAAGATCATAT",10,193.09,6.92,-3.84,0.15,1.72,1.15,0,">1 nonsynonymous","N64Y C150Y",2
"lib1","SARS-CoV-2","TTTTAAAAGTGTGAGC",2,140.21,9.83,-0.93,0.05,2.84,1.07,0,"1 nonsynonymous","T170F",1
"lib1","SARS-CoV-2","TTTTAAAATCCTCTTA",3,18.17,8.92,-1.85,0.26,1.5,1,0.03,">1 nonsynonymous","N1Y F62M A105G S139A",4
"lib1","SARS-CoV-2","TTTTAAACACCGCCCT",2,73.83,10.78,0.02,0.07,2.97,1.01,0,"1 nonsynonymous","T46E",1
"lib1","SARS-CoV-2","TTTTAAACCAAAGCCT",4,79.4,9.31,-1.45,0.08,2.58,1.07,0,">1 nonsynonymous","V32M Q144D P169Q",3
"lib1","SARS-CoV-2","TTTTAAACCTTCAAAG",6,50.06,6,-4.76,2,1.5,1.18,0.05,">1 nonsynonymous","Y93F A105R",2
"lib1","SARS-CoV-2","TTTTAAACGAGACAAC",2,24.89,9.15,-1.62,0.2,1.98,1.11,0.02,">1 nonsynonymous","W106V P149I",2
"lib1","SARS-CoV-2","TTTTAAACGCTCAAAA",1,12.24,10.69,-0.08,0.06,2.94,1,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTAAACTCCTCATA",2,129.74,10.71,-0.06,0.09,2.88,1.09,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTAAACTTCACCAG",1,10.18,8.25,-2.51,0.18,2.08,1.11,0.01,">1 nonsynonymous","G9N Q84Y D98S G117A",4
"lib1","SARS-CoV-2","TTTTAAAGAAATTGGA",2,14.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D112F T193Y V194G",4
"lib1","SARS-CoV-2","TTTTAAAGAATAAGAG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","T63A A105C T140D Y143*",4
"lib1","SARS-CoV-2","TTTTAAAGCGTTTTAG",4,42.62,6,-4.76,2,1.5,1.26,0.05,">1 nonsynonymous","K56V G83R Y91N C102F S184G",5
"lib1","SARS-CoV-2","TTTTAAATAATAATAT",2,43.13,10.64,-0.12,0.08,2.95,1.02,0,"1 nonsynonymous","Y39P",1
"lib1","SARS-CoV-2","TTTTAAATATACCCAT",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70V G83I I88N D112L",4
"lib1","SARS-CoV-2","TTTTAACAAAGGAGAT",15,152.32,10.47,-0.29,0.04,2.92,1.03,0,"1 nonsynonymous","F44V",1
"lib1","SARS-CoV-2","TTTTAACACGTAATGA",1,11.05,6,-4.76,2,1.5,1.22,0.04,">1 nonsynonymous","C49G A89Y P161T",3
"lib1","SARS-CoV-2","TTTTAACAGAAAATAT",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N N92L D97I G117S G146Q",5
"lib1","SARS-CoV-2","TTTTAACAGAAAGTCC",5,38.93,6,-4.76,2,1.5,1.16,0.01,"1 nonsynonymous","Y93P",1
"lib1","SARS-CoV-2","TTTTAACCCTGTGAAG",1,20.31,9.96,-0.8,0.09,2.57,1.06,0,"1 nonsynonymous","T100G",1
"lib1","SARS-CoV-2","TTTTAACCCTGTGTGT",5,24.92,6.7,-4.07,0.46,1.5,1.23,0.04,">1 nonsynonymous","F12G D34E G155T",3
"lib1","SARS-CoV-2","TTTTAACCTCCGTCTA",1,111.93,10.04,-0.73,0.11,2.56,1.01,0,">1 nonsynonymous","A18T D90T",2
"lib1","SARS-CoV-2","TTTTAACTCCTGCAGG",1,34.3,9.35,-1.42,0.21,1.81,1.2,0.02,">1 nonsynonymous","A14Y F44L N151Q",3
"lib1","SARS-CoV-2","TTTTAAGAAAAGAAGG",4,0.51,NA,NA,NA,NA,NA,NA,"stop","T63C A67S G83C D90N I138R C158* T201L",7
"lib1","SARS-CoV-2","TTTTAAGACGACAAGA",9,265.13,10.73,-0.03,0.07,2.88,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTAAGAGGACCTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* T63M V77T G117S",4
"lib1","SARS-CoV-2","TTTTAAGCACTGTTAT",3,95.08,10.72,-0.04,0.06,2.92,1.05,0,"1 nonsynonymous","N120L",1
"lib1","SARS-CoV-2","TTTTAAGTAACGGTAA",3,43.17,6,-4.76,2,1.5,1.3,0.04,">1 nonsynonymous","A14I L38I R127D",3
"lib1","SARS-CoV-2","TTTTAAGTATTATGTA",6,146.32,7.66,-3.11,0.26,1.5,1.05,0.02,">1 nonsynonymous","S69L Q168I",2
"lib1","SARS-CoV-2","TTTTAAGTGATAGAGG",2,15.2,6,-4.76,2,1.5,1.22,0.05,">1 nonsynonymous","L38K Y91P S139C",3
"lib1","SARS-CoV-2","TTTTAATAAAACACAT",3,28.04,8.76,-2,0.11,2.33,1.21,0.01,">1 nonsynonymous","A33F K87M D137G",3
"lib1","SARS-CoV-2","TTTTAATAATGGTGTG",1,8.56,10.09,-0.68,0.2,2.84,1,0.02,">1 nonsynonymous","P133A S164L",2
"lib1","SARS-CoV-2","TTTTAATAGAGAATTT",1,56.23,10.42,-0.35,0.05,2.84,1.02,0,"1 nonsynonymous","R136L",1
"lib1","SARS-CoV-2","TTTTAATATTATCATA",9,82.45,10.86,0.09,0.07,2.9,1.02,0,"1 nonsynonymous","F160N",1
"lib1","SARS-CoV-2","TTTTAATGAAGTTATA",2,5.23,6,-4.76,2,1.5,1.41,0.05,">1 nonsynonymous","F70S P82W K94Y T170A",4
"lib1","SARS-CoV-2","TTTTAATTAATCGTTT",6,57.81,7.44,-3.32,0.28,1.5,1.18,0.02,">1 nonsynonymous","S29E S45N F99L T148I",4
"lib1","SARS-CoV-2","TTTTACAAACATATTT",3,20.42,10.84,0.08,0.13,2.92,1.03,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTACAACCCACAAA",6,80.27,10.74,-0.03,0.03,2.95,1.02,0,">1 nonsynonymous","N40G E141S",2
"lib1","SARS-CoV-2","TTTTACAAGGGACTGA",13,179.03,6,-4.76,2,1.5,1.23,0.01,">1 nonsynonymous","A81S G86K A145R Q176E",4
"lib1","SARS-CoV-2","TTTTACAGAACTCAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V V173P F185H",3
"lib1","SARS-CoV-2","TTTTACATAAAAATAA",1,11.88,9.96,-0.8,0.11,2.98,1,0.01,">1 nonsynonymous","N1R F8W Y119G N130R",4
"lib1","SARS-CoV-2","TTTTACATATCTCAAG",1,1.96,NA,NA,NA,NA,NA,NA,"stop","C31E V37* G83V",3
"lib1","SARS-CoV-2","TTTTACATCATAAGCG",5,18.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77W I88M N120G N157K Y178H",5
"lib1","SARS-CoV-2","TTTTACATCATGGACA",1,52.57,10.85,0.09,0.05,2.93,1.04,0,"1 nonsynonymous","Q84S",1
"lib1","SARS-CoV-2","TTTTACATGAGATCAA",3,35.2,6,-4.76,2,1.5,1.25,0.03,">1 nonsynonymous","F44R Y175T T201K",3
"lib1","SARS-CoV-2","TTTTACCCACAAAAAA",4,57.64,6,-4.76,2,3,1.15,0,">1 nonsynonymous","F99S I104S Y119F K132M",4
"lib1","SARS-CoV-2","TTTTACCCACTAACCG",2,16.9,10.78,0.01,0.06,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTACCGGGCCTCTT",2,6.55,10.83,0.07,0.14,2.92,1.06,0,"1 nonsynonymous","S53P",1
"lib1","SARS-CoV-2","TTTTACCGTGCGTAAT",6,16.15,9.12,-1.65,0.29,1.5,1,0.05,">1 nonsynonymous","C6Y S41A K94Q",3
"lib1","SARS-CoV-2","TTTTACCTAACACCAT",5,40.56,6,-4.76,2,1.5,1.19,0.01,">1 nonsynonymous","I88R H189N",2
"lib1","SARS-CoV-2","TTTTACGAAACAGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41L C61T F99P Y121A I142L Q176*",6
"lib1","SARS-CoV-2","TTTTACGACAAAGCAC",9,42.55,8.87,-1.9,0.25,1.5,1.13,0.03,">1 nonsynonymous","L5I S69K G152S",3
"lib1","SARS-CoV-2","TTTTACGACCCCCCAG",3,4.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E154K",1
"lib1","SARS-CoV-2","TTTTACGCAAGCCGGT",4,45.84,6,-4.76,2,1.5,1.16,0.04,">1 nonsynonymous","N4A A89K S113F Y175K",4
"lib1","SARS-CoV-2","TTTTACGCCAAAAAAT",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y L60W",2
"lib1","SARS-CoV-2","TTTTACGGATTGGTGT",3,11.67,6,-4.76,2,1.5,1.12,0.01,">1 nonsynonymous","S19R N107A F167T",3
"lib1","SARS-CoV-2","TTTTACTAAAGAATCA",4,2.24,NA,NA,NA,NA,NA,NA,"stop","V11Q R16L C61K V77P A81T T140* Y175I",7
"lib1","SARS-CoV-2","TTTTACTAAGATGATT",1,1.77,NA,NA,NA,NA,NA,NA,"stop","T3Q K114*",2
"lib1","SARS-CoV-2","TTTTACTACATAAATA",3,9.19,NA,NA,NA,NA,NA,NA,"stop","R124*",1
"lib1","SARS-CoV-2","TTTTACTAGACATCGT",5,73.33,10.72,-0.05,0.08,2.93,1.07,0,"1 nonsynonymous","N40E",1
"lib1","SARS-CoV-2","TTTTACTCAAGCCCTT",1,23.47,6,-4.76,2,3,1.18,0.01,">1 nonsynonymous","V20N L57W F156W P177R",4
"lib1","SARS-CoV-2","TTTTACTCGTAACCTA",9,65.13,7.83,-2.93,0.36,1.5,1,0.04,">1 nonsynonymous","V52I S113R I138F Y178L",4
"lib1","SARS-CoV-2","TTTTACTTCAACCTTA",2,39.61,10.19,-0.58,0.1,2.87,1,0,">1 nonsynonymous","L5I C31A",2
"lib1","SARS-CoV-2","TTTTACTTGACAGCAT",4,3.44,NA,NA,NA,NA,NA,NA,"stop","S19M D68L K87A A105* G174I H189T",6
"lib1","SARS-CoV-2","TTTTACTTTTTCCATT",1,102.98,10.26,-0.51,0.05,2.89,1.02,0,">1 nonsynonymous","T55Y G152D S164W",3
"lib1","SARS-CoV-2","TTTTAGAAAAGACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* P82E D98Y V103R G166R",5
"lib1","SARS-CoV-2","TTTTAGAACACCGAAC",6,71.1,6,-4.76,2,2.4,1.11,0,"1 nonsynonymous","D68K",1
"lib1","SARS-CoV-2","TTTTAGAACCCAGGCA",6,139.34,10.39,-0.38,0.05,2.84,1.05,0,">1 nonsynonymous","S164L Y178F",2
"lib1","SARS-CoV-2","TTTTAGAATCGCTATT",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103W F160L",2
"lib1","SARS-CoV-2","TTTTAGAATTCAGCCA",18,421.86,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","I28V C158P L188V T201L",4
"lib1","SARS-CoV-2","TTTTAGACAAATGACG",2,127.32,8.26,-2.5,0.14,2.55,1.11,0.01,">1 nonsynonymous","F44Y Y119P S139G Q168D",4
"lib1","SARS-CoV-2","TTTTAGATAAAATTGA",4,52.02,8.31,-2.46,0.42,1.5,1.06,0.06,">1 nonsynonymous","N13S T46I Q84H K87G K128A",5
"lib1","SARS-CoV-2","TTTTAGATAACTAAAG",2,104.13,8.65,-2.12,0.2,2.4,1.11,0.02,">1 nonsynonymous","N4I N64R K87I G117L",4
"lib1","SARS-CoV-2","TTTTAGCCGATAAAAA",7,77.61,6,-4.76,2,1.5,1.15,0.01,">1 nonsynonymous","F99I W106T N157I",3
"lib1","SARS-CoV-2","TTTTAGCTAACATCCT",4,67.71,8.57,-2.2,0.11,2.75,1.05,0.01,">1 nonsynonymous","Y143N T201S",2
"lib1","SARS-CoV-2","TTTTAGCTGACTCGAT",3,12.19,6,-4.76,2,1.5,1.17,0.03,">1 nonsynonymous","F44D C61G F99C",3
"lib1","SARS-CoV-2","TTTTAGGCACACACAC",2,44.11,8.94,-1.82,0.32,1.61,1.1,0.04,"1 nonsynonymous","D68S",1
"lib1","SARS-CoV-2","TTTTAGTACAAGTTAT",4,26.35,6.07,-4.69,1.5,1.5,1.27,0.04,">1 nonsynonymous","N64L A89G V103G L122M",4
"lib1","SARS-CoV-2","TTTTAGTACCGAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13L V20S F99* G166W",4
"lib1","SARS-CoV-2","TTTTAGTCATAGAGAG",7,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T K114T R136N",3
"lib1","SARS-CoV-2","TTTTAGTCTATGGTGC",1,23.83,8.94,-1.83,0.08,2.85,1.12,0,">1 nonsynonymous","L38F Y119I",2
"lib1","SARS-CoV-2","TTTTAGTGCTCCTATA",8,76.23,6.01,-4.75,0.96,1.5,1.19,0.02,">1 nonsynonymous","D68R S113T",2
"lib1","SARS-CoV-2","TTTTAGTTCAATATTG",1,8.72,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","P54H I88S",2
"lib1","SARS-CoV-2","TTTTATAAAACATTGC",3,37.41,6.7,-4.06,0.41,1.5,1.2,0.02,">1 nonsynonymous","T15V C61A K87A G117W",4
"lib1","SARS-CoV-2","TTTTATAAATACGCGA",1,65.74,10.77,0.01,0.1,2.84,1.11,0,">1 nonsynonymous","V37L K56A D90L Q168Y",4
"lib1","SARS-CoV-2","TTTTATAAGCCAATAA",3,75.95,9.74,-1.02,0.16,1.73,1.13,0.01,">1 nonsynonymous","N40K L95T S129G",3
"lib1","SARS-CoV-2","TTTTATAAGGACTGTT",3,79.8,10.7,-0.06,0.08,2.92,1.07,0,"1 nonsynonymous","A22K",1
"lib1","SARS-CoV-2","TTTTATACAACCGACC",2,28.31,10.91,0.14,0.07,2.94,1.03,0,">1 nonsynonymous","D90T L122K",2
"lib1","SARS-CoV-2","TTTTATACCGCTAAAT",2,6.37,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","T15F P82H",2
"lib1","SARS-CoV-2","TTTTATAGCCATAAGT",5,101.15,10.28,-0.48,0.04,2.86,1.01,0,"1 nonsynonymous","G51A",1
"lib1","SARS-CoV-2","TTTTATATAAACGTCT",7,43.24,6,-4.76,2,3,1.22,0.01,">1 nonsynonymous","C6A L57R G155I F185Y",4
"lib1","SARS-CoV-2","TTTTATATAATCTTGG",7,23.02,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","I80Q S147F",2
"lib1","SARS-CoV-2","TTTTATCAAGTTTGAA",1,10.52,10.9,0.13,0.13,2.97,1,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTATCACAACTGAC",4,8.5,6,-4.76,2,3,1.14,0,">1 nonsynonymous","L38S T85Y N107H Y119P",4
"lib1","SARS-CoV-2","TTTTATCCACATTATA",9,145.47,10.57,-0.19,0.07,2.89,1.04,0,"1 nonsynonymous","V32G",1
"lib1","SARS-CoV-2","TTTTATCGAAAAACTT",2,65.76,6,-4.76,2,1.5,1.12,0,">1 nonsynonymous","A22W L57Y G86W",3
"lib1","SARS-CoV-2","TTTTATCGAGTGGAAC",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G N120I S129F H189L P197V",5
"lib1","SARS-CoV-2","TTTTATCTAATGATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37A P54L G74V E141* C158Q",5
"lib1","SARS-CoV-2","TTTTATCTACTCAAGG",4,144.05,10.69,-0.07,0.06,2.9,1.03,0,"1 nonsynonymous","S139R",1
"lib1","SARS-CoV-2","TTTTATGAAACCGTGT",3,5.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L Y123G L183F",3
"lib1","SARS-CoV-2","TTTTATGATCGAATTG",10,242.41,9.42,-1.34,0.09,2.54,1.15,0,">1 nonsynonymous","Q176L S200R",2
"lib1","SARS-CoV-2","TTTTATGCAAATAACA",8,142.4,9.08,-1.68,0.07,2.72,1.12,0,">1 nonsynonymous","V32T N58R Y143V",3
"lib1","SARS-CoV-2","TTTTATGCGTACCGTT",6,79.05,10.2,-0.57,0.05,2.83,1,0,">1 nonsynonymous","C6Q N24T",2
"lib1","SARS-CoV-2","TTTTATGGCACGACCA",1,9.55,6,-4.76,2,1.5,1.16,0.02,">1 nonsynonymous","W23G I88Y D137M G146L F160N",5
"lib1","SARS-CoV-2","TTTTATGTATAGTCTT",8,71.39,6.32,-4.44,0.77,1.5,1.22,0.04,">1 nonsynonymous","W23M L95F",2
"lib1","SARS-CoV-2","TTTTATGTGACACCAA",1,18.64,10.12,-0.64,0.09,2.43,1.02,0,">1 nonsynonymous","R27V P54F D59S Q84L G116R",5
"lib1","SARS-CoV-2","TTTTATTACCTTAAAG",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T Y35K S45L V52G Y119L",5
"lib1","SARS-CoV-2","TTTTATTCATAGTTGA",4,59.18,6,-4.76,2,3,1.11,0,">1 nonsynonymous","L38S G117V Y123G",3
"lib1","SARS-CoV-2","TTTTATTCGCCCACTA",2,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D G51F D59L T63N N92S A145G Y165F",7
"lib1","SARS-CoV-2","TTTTATTCTCCGCGAC",4,25.29,8.98,-1.78,0.37,1.5,1,0.07,">1 nonsynonymous","C49N F62W",2
"lib1","SARS-CoV-2","TTTTATTGAAGAACCT",1,8.58,6,-4.76,2,1.5,1.28,0.04,">1 nonsynonymous","F47C D59A D75T P149C T201D",5
"lib1","SARS-CoV-2","TTTTATTGCCACAGGG",7,46.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33H A42Y P161R",3
"lib1","SARS-CoV-2","TTTTATTGGCACAGCT",3,127.31,10.1,-0.66,0.07,2.76,1.01,0,">1 nonsynonymous","K128L Q144T L187H S200V",4
"lib1","SARS-CoV-2","TTTTATTGGCCAAAAA",3,8.83,8.8,-1.97,0.28,1.5,1.01,0.05,">1 nonsynonymous","N1R R16K S69I",3
"lib1","SARS-CoV-2","TTTTATTTCAAGCTCA",2,45.4,10.77,0,0.07,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTATTTTGTACGGA",2,30.58,8.81,-1.96,0.37,1.5,1,0.05,">1 nonsynonymous","K94S F99T F134D",3
"lib1","SARS-CoV-2","TTTTCAAAATTGAAAA",4,18.26,6,-4.76,1.26,1.5,1.15,0.01,">1 nonsynonymous","Y35V N58F Y66Q N118Y R127M I138M F160N",7
"lib1","SARS-CoV-2","TTTTCAAACGCACTCA",10,38.62,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","T3D R16G I28P G172Q",4
"lib1","SARS-CoV-2","TTTTCAACAATGGATG",5,17.48,6.39,-4.37,0.38,1.5,1.21,0.02,">1 nonsynonymous","I28Q A81H W106D",3
"lib1","SARS-CoV-2","TTTTCAACCCCCAAAT",1,4.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTTTCAAGACAACAAT",3,15.06,10.7,-0.06,0.09,2.88,1,0,"1 nonsynonymous","L122M",1
"lib1","SARS-CoV-2","TTTTCAAGAGTAAAAT",3,17.47,6.68,-4.08,0.67,1.5,1,0.06,">1 nonsynonymous","G86P S147A",2
"lib1","SARS-CoV-2","TTTTCAAGCTTTACAC",9,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Y S43I Q84S R127L R136E Y175N",6
"lib1","SARS-CoV-2","TTTTCAAGGCTTAACC",2,6.49,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","V37N L57S R73Q N92D G152K Y175M V181R",7
"lib1","SARS-CoV-2","TTTTCAATAAAACCAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","A14C K94* T201M",3
"lib1","SARS-CoV-2","TTTTCAATAAAGGACG",3,38.81,6,-4.76,2,1.5,1.21,0.02,">1 nonsynonymous","V37W S43L D90V T100L P133Y Y143A",6
"lib1","SARS-CoV-2","TTTTCAATGAAGTTGA",9,1.44,NA,NA,NA,NA,NA,NA,"stop","S29N Q79M Q84L L122* V173N",5
"lib1","SARS-CoV-2","TTTTCACACAGGCTAA",1,13.08,NA,NA,NA,NA,NA,NA,"stop","I28V Y35P T55F P96N W106T L125*",6
"lib1","SARS-CoV-2","TTTTCACATGCCGTCC",2,31.87,6,-4.76,2,3,1.13,0,">1 nonsynonymous","R16G G51I V77W A81M P161S H189E",6
"lib1","SARS-CoV-2","TTTTCACCCATAGATA",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S C49A Q84A N130I E141C N157L",6
"lib1","SARS-CoV-2","TTTTCACGGTGAGACC",5,67.81,10.33,-0.44,0.08,2.84,1.03,0,">1 nonsynonymous","Y39W V71T",2
"lib1","SARS-CoV-2","TTTTCACGTCTCCACG",6,39.73,6,-4.76,2,1.5,1.14,0.03,">1 nonsynonymous","K26P E135A Q168V",3
"lib1","SARS-CoV-2","TTTTCACTTAGTAATT",2,55.17,8.33,-2.43,0.12,2.54,1.04,0,">1 nonsynonymous","A33P G117D L131V",3
"lib1","SARS-CoV-2","TTTTCAGAACAATTCG",2,4.8,NA,NA,NA,NA,NA,NA,"stop","V32G C49S K114R V181*",4
"lib1","SARS-CoV-2","TTTTCAGACATAATTG",2,32.44,10.04,-0.72,0.13,2.84,1.01,0.01,"1 nonsynonymous","Y143M",1
"lib1","SARS-CoV-2","TTTTCAGGGCATAGGA",11,177.27,9.9,-0.87,0.09,1.93,1.08,0,">1 nonsynonymous","S36L W106I",2
"lib1","SARS-CoV-2","TTTTCAGGTCAAGTAG",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T N40G G86V G146T",4
"lib1","SARS-CoV-2","TTTTCAGTATGAATCG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib1","SARS-CoV-2","TTTTCAGTCTACACGT",11,157.67,10.3,-0.47,0.06,2.82,1.05,0,"1 nonsynonymous","P96D",1
"lib1","SARS-CoV-2","TTTTCAGTCTTAGAAA",4,20.09,10.45,-0.31,0.09,2.82,1.19,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTCAGTTAGTAGCA",1,13.57,10.61,-0.15,0.11,2.91,1.08,0.01,"1 nonsynonymous","N171S",1
"lib1","SARS-CoV-2","TTTTCATAATCACGAT",5,175.13,6,-4.76,1.73,1.5,1.18,0.01,">1 nonsynonymous","Y39L S129C R179S",3
"lib1","SARS-CoV-2","TTTTCATAATTCGTTT",2,32.95,6,-4.76,2,1.5,1.31,0.03,">1 nonsynonymous","I88E W106R L111I",3
"lib1","SARS-CoV-2","TTTTCATAGACCACGA",5,80.35,10.72,-0.04,0.05,2.89,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTCATCGTGAAAAA",1,29.24,6.57,-4.2,0.49,1.5,1.1,0.03,">1 nonsynonymous","K87R N107V N130P G152F F167L",5
"lib1","SARS-CoV-2","TTTTCATGCATACATA",16,326.89,10.74,-0.02,0.05,2.88,1.08,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTCATTGATGACAC",7,160.95,10.76,-0.01,0.07,2.87,1.06,0,"1 nonsynonymous","K56M",1
"lib1","SARS-CoV-2","TTTTCATTGTGATTAA",2,30.04,6,-4.76,2,1.5,1.31,0.07,">1 nonsynonymous","F47V T55N I88V Y143M P177K",5
"lib1","SARS-CoV-2","TTTTCCAAGCCGAACC",6,72.82,7.17,-3.6,0.33,1.5,1.17,0.02,">1 nonsynonymous","C6Q K48N T55I Y119D P149V",5
"lib1","SARS-CoV-2","TTTTCCACACCCTGGT",6,45.45,6,-4.76,2,3,1.13,0,">1 nonsynonymous","W106L S113T F160I",3
"lib1","SARS-CoV-2","TTTTCCACATTATTAA",8,58.72,8.9,-1.87,0.18,1.78,1.14,0.02,">1 nonsynonymous","D98M Y121K F134W",3
"lib1","SARS-CoV-2","TTTTCCACTTTACTTG",2,13.71,10.55,-0.22,0.08,2.83,1,0,">1 nonsynonymous","S45A D90R",2
"lib1","SARS-CoV-2","TTTTCCAGGGGTACAT",2,20.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13Q Y39W N118I P133Y",4
"lib1","SARS-CoV-2","TTTTCCATGAGCCTTA",8,58.47,6.24,-4.52,0.88,1.5,1.3,0.03,">1 nonsynonymous","A14I F99I",2
"lib1","SARS-CoV-2","TTTTCCATGAGGAAGG",3,2.04,NA,NA,NA,NA,NA,NA,"stop","A14R Y35* F62D G117R",4
"lib1","SARS-CoV-2","TTTTCCCGCATGGATA",5,120.11,10.76,0,0.05,2.87,1.07,0,"1 nonsynonymous","P54S",1
"lib1","SARS-CoV-2","TTTTCCGAATTGTACA",2,70.06,6,-4.76,2,1.5,1.24,0.03,">1 nonsynonymous","G9Q T85K A89V N157P Y165S",5
"lib1","SARS-CoV-2","TTTTCCGAGGAGTAGT",2,26.58,10.37,-0.39,0.07,2.89,1.08,0,"1 nonsynonymous","G174Y",1
"lib1","SARS-CoV-2","TTTTCCGAGTAACTAT",5,35.42,10.48,-0.29,0.04,2.95,1,0,">1 nonsynonymous","Y35F Y91F P96T",3
"lib1","SARS-CoV-2","TTTTCCGCACGTCATT",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N F47V V153R F160D",4
"lib1","SARS-CoV-2","TTTTCCTAAACGACTG",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I D34Y V52F C61S D97V G152T",6
"lib1","SARS-CoV-2","TTTTCCTACAATATTG",10,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D T63P N109S",3
"lib1","SARS-CoV-2","TTTTCCTATAAATAAA",2,30.11,6,-4.76,2,1.5,1.22,0.07,">1 nonsynonymous","G86P Y91A D98V P149S",4
"lib1","SARS-CoV-2","TTTTCCTGCCTATGAT",1,41.11,10.5,-0.27,0.06,2.89,1.09,0,"1 nonsynonymous","F44L",1
"lib1","SARS-CoV-2","TTTTCCTTGAAAGGCT",8,2.72,NA,NA,NA,NA,NA,NA,"stop","D59K E76Q G116* R124W",4
"lib1","SARS-CoV-2","TTTTCGAAAATAACGG",8,108.47,9.84,-0.92,0.04,2.92,1.03,0,"1 nonsynonymous","L125P",1
"lib1","SARS-CoV-2","TTTTCGAAATTTAAGT",11,51.42,6,-4.76,1.81,1.5,1.16,0.01,">1 nonsynonymous","W23G Y91F A145L C150L E154V P161H",6
"lib1","SARS-CoV-2","TTTTCGACAATTAACT",2,56.32,10.78,0.02,0.08,2.97,1.03,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTCGACCATGACAT",2,72.58,10.79,0.03,0.05,2.9,1.05,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTCGACGTTTCCTA",6,31.23,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","F99S",1
"lib1","SARS-CoV-2","TTTTCGAGTGAATCAC",8,59.76,9.1,-1.67,0.26,1.5,1,0.04,">1 nonsynonymous","A14V N24F R136S",3
"lib1","SARS-CoV-2","TTTTCGATACAAGACG",3,36.36,10.19,-0.57,0.1,2.61,1.04,0,">1 nonsynonymous","F44S T140C",2
"lib1","SARS-CoV-2","TTTTCGATGCGTCCTT",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P T15R K56Q D98I V103I",5
"lib1","SARS-CoV-2","TTTTCGCACCTTTCTT",2,63.22,10.76,0,0.06,2.92,1.05,0,"1 nonsynonymous","T100H",1
"lib1","SARS-CoV-2","TTTTCGCCATACGACC",1,48.23,10.83,0.07,0.06,2.9,1.03,0,">1 nonsynonymous","Y35L V52L",2
"lib1","SARS-CoV-2","TTTTCGCGAGTACTAA",2,10.2,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T63S G146P F160L",3
"lib1","SARS-CoV-2","TTTTCGCGTATATTAG",1,4.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T170H",1
"lib1","SARS-CoV-2","TTTTCGGAAAAAATCA",1,15.1,9.74,-1.02,0.19,2.35,1,0.01,"1 nonsynonymous","D34M",1
"lib1","SARS-CoV-2","TTTTCGGAAAGATTAA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","N4S I88V L131*",3
"lib1","SARS-CoV-2","TTTTCGGCGCTATACA",1,30.45,6,-4.76,0.66,1.5,1.12,0.01,">1 nonsynonymous","A18L A145E Y165I",3
"lib1","SARS-CoV-2","TTTTCGGTAGATCAAT",9,266.06,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","S53L A105M D112A F160S Y178I",5
"lib1","SARS-CoV-2","TTTTCGGTATTCCATA",4,1.97,NA,NA,NA,NA,NA,NA,"stop","D90S D98* V153D P177L",4
"lib1","SARS-CoV-2","TTTTCGTCGGTCAATC",1,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L F70Y C150Y",3
"lib1","SARS-CoV-2","TTTTCGTGATGTGCGT",1,13.4,8.67,-2.09,0.11,2.63,1.21,0.01,">1 nonsynonymous","Y35I D59H T63K I104T G174V",5
"lib1","SARS-CoV-2","TTTTCGTGCCTTAGAA",1,137.89,10.69,-0.08,0.04,2.93,1,0,">1 nonsynonymous","G9P V77L",2
"lib1","SARS-CoV-2","TTTTCGTTCTCTTAGT",4,89.35,9.3,-1.47,0.12,2.23,1.12,0.01,">1 nonsynonymous","I2C Y121R",2
"lib1","SARS-CoV-2","TTTTCTAAAATTTATC",2,31.87,10.5,-0.26,0.06,2.89,1.09,0,"1 nonsynonymous","T15L",1
"lib1","SARS-CoV-2","TTTTCTAAACGTTTTA",4,0,NA,NA,NA,NA,NA,NA,"stop","A33* N120D P149V P169V",4
"lib1","SARS-CoV-2","TTTTCTAGTAATCTCA",2,30,6,-4.76,1.8,1.5,1.13,0.02,">1 nonsynonymous","Q84C Y91D Y143K",3
"lib1","SARS-CoV-2","TTTTCTAGTACATATT",8,100.23,10.5,-0.27,0.06,2.88,1.04,0,"1 nonsynonymous","D98L",1
"lib1","SARS-CoV-2","TTTTCTCAAAGCACCT",1,45.46,9.26,-1.51,0.38,1.5,1,0.07,">1 nonsynonymous","D90Q D97T W106A Y123S Y143V T148L",6
"lib1","SARS-CoV-2","TTTTCTCGCGAAAGAG",8,139.46,9.81,-0.96,0.07,2.53,1.05,0,">1 nonsynonymous","C31L P149V V173R T201V",4
"lib1","SARS-CoV-2","TTTTCTCGTTTATGTG",3,17.16,6,-4.76,2,3,1.32,0.01,">1 nonsynonymous","N4Y V37T C102F Y121M G174A",5
"lib1","SARS-CoV-2","TTTTCTCTGACCTTAG",1,3.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128L",1
"lib1","SARS-CoV-2","TTTTCTGAACTTTAAC",8,109.28,10.74,-0.02,0.05,2.86,1.1,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTCTGACAGCGTTG",4,84.42,10.2,-0.57,0.09,2.64,1.12,0,">1 nonsynonymous","V77M V115S",2
"lib1","SARS-CoV-2","TTTTCTGATTACCGAC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","Y93G L131V I142*",3
"lib1","SARS-CoV-2","TTTTCTGGCTAAGATA",4,27.1,6,-4.76,2,1.5,1.36,0.07,">1 nonsynonymous","F44L N58M V77L L95I F160G V181R",6
"lib1","SARS-CoV-2","TTTTCTTAATGCCAGA",1,91.48,10.86,0.09,0.09,2.95,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTCTTAGACAACAT",3,69.75,9.88,-0.88,0.1,2.36,1.06,0,">1 nonsynonymous","K48R C61K W106C",3
"lib1","SARS-CoV-2","TTTTCTTAGGAATGGA",5,167.16,10.76,-0.01,0.08,2.87,1.09,0,"1 nonsynonymous","Y39Q",1
"lib1","SARS-CoV-2","TTTTCTTAGGGAATCA",1,2.96,NA,NA,NA,NA,NA,NA,"stop","R16K G116R F167K K198*",4
"lib1","SARS-CoV-2","TTTTCTTCTATATCAG",1,8.57,9.16,-1.6,0.15,2.86,1.07,0.01,">1 nonsynonymous","C6G F156M T201D",3
"lib1","SARS-CoV-2","TTTTCTTGAAACACAA",4,29.77,10.21,-0.56,0.11,2.73,1,0,">1 nonsynonymous","D90F S184Y",2
"lib1","SARS-CoV-2","TTTTCTTGTAACGCTG",2,10.95,8.81,-1.95,0.09,2.93,1.06,0.01,">1 nonsynonymous","G116V G166L",2
"lib1","SARS-CoV-2","TTTTGAAAAAACATAC",2,8.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99I G146L",2
"lib1","SARS-CoV-2","TTTTGAAAAGAATTAA",8,60.28,10.64,-0.12,0.05,2.93,1.06,0,">1 nonsynonymous","G83D P197R",2
"lib1","SARS-CoV-2","TTTTGAACCTCATATA",2,5.55,10.61,-0.15,0.15,2.65,1.28,0.01,">1 nonsynonymous","N4K L122H G174P",3
"lib1","SARS-CoV-2","TTTTGAACGCGCAGGG",9,158.96,8.24,-2.53,0.19,1.53,1.18,0.01,">1 nonsynonymous","A14W L125R T201Y",3
"lib1","SARS-CoV-2","TTTTGAACTCGCAATT",3,51.46,10.05,-0.72,0.09,2.7,1.05,0,">1 nonsynonymous","S41P C61G P149T",3
"lib1","SARS-CoV-2","TTTTGAACTGTTTATA",2,1.37,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib1","SARS-CoV-2","TTTTGAATAAAATGCT",21,375.27,8.92,-1.85,0.08,2.64,1.13,0,">1 nonsynonymous","S41Q T55F D90E T170R",4
"lib1","SARS-CoV-2","TTTTGAATACAGACTA",1,50.72,9.29,-1.48,0.12,2.57,1.19,0.01,">1 nonsynonymous","Y123L G166M S200V",3
"lib1","SARS-CoV-2","TTTTGAATGATACTAT",6,88.88,8.9,-1.86,0.06,2.76,1.09,0,"1 nonsynonymous","N157T",1
"lib1","SARS-CoV-2","TTTTGAATGCTGGATG",2,11.95,6.85,-3.91,0.53,1.5,1.16,0.04,">1 nonsynonymous","T3I C31M Y123L G155S",4
"lib1","SARS-CoV-2","TTTTGAATGGTTACAG",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F W23P S43L P96L C150F",5
"lib1","SARS-CoV-2","TTTTGAATTCGGTACC",5,32.72,6,-4.76,2,3,1.28,0.01,">1 nonsynonymous","W23R D90F T100R",3
"lib1","SARS-CoV-2","TTTTGACAAACACGTT",1,0.87,NA,NA,NA,NA,NA,NA,"stop","P96R W106* T170P",3
"lib1","SARS-CoV-2","TTTTGACAACCTTAGG",4,160.57,6,-4.76,2,1.5,1.22,0.01,">1 nonsynonymous","S19L N24L Y39L K56I Y91E R124N N157I",7
"lib1","SARS-CoV-2","TTTTGACAGGGATAGC",3,61.11,10.52,-0.24,0.05,2.89,1,0,"1 nonsynonymous","K94N",1
"lib1","SARS-CoV-2","TTTTGACCACCTCATA",2,12.02,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35N A42T D90C F134T",4
"lib1","SARS-CoV-2","TTTTGAGAGGCCCACA",3,10.87,6.07,-4.69,2,3,1.1,0.01,">1 nonsynonymous","K56P L95R A105E K132Y",4
"lib1","SARS-CoV-2","TTTTGAGCTTGCACTC",4,16.62,8.17,-2.59,0.22,1.5,1.15,0.01,">1 nonsynonymous","N4Q S41L F99L Y119T",4
"lib1","SARS-CoV-2","TTTTGAGGACTCTGAA",4,73.54,9.94,-0.83,0.05,1.98,1.03,0,">1 nonsynonymous","V77R K87R Y123L",3
"lib1","SARS-CoV-2","TTTTGAGGAGAAAAAA",2,7.35,6,-4.76,2,3,1.06,0.01,">1 nonsynonymous","D97F C158V G166K",3
"lib1","SARS-CoV-2","TTTTGAGGCAATTAAG",3,53.02,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","G9V Y39P C49N L57C F99V W106L",6
"lib1","SARS-CoV-2","TTTTGAGGCTAACATC",3,52.56,6.14,-4.63,0.23,2.08,1.09,0,">1 nonsynonymous","I142Y P161D",2
"lib1","SARS-CoV-2","TTTTGATCAAGAGCAT",1,10.05,6,-4.76,2,1.5,1.25,0.06,">1 nonsynonymous","T55V G86M L131R",3
"lib1","SARS-CoV-2","TTTTGATGGTGACGAA",2,82.28,10.83,0.07,0.06,2.88,1.06,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTGATTATAGTTAC",1,10.39,8.05,-2.72,0.29,1.85,1.12,0.04,">1 nonsynonymous","G9A T63Y V71L N107A",4
"lib1","SARS-CoV-2","TTTTGATTGGTGCTTA",1,1.04,NA,NA,NA,NA,NA,NA,"stop","N13V Y21* C61R T100M R127S",5
"lib1","SARS-CoV-2","TTTTGATTTTCTAATT",19,406.21,8.18,-2.58,0.15,1.78,1.1,0.01,">1 nonsynonymous","Q176V A190I",2
"lib1","SARS-CoV-2","TTTTGCAAGAGAAACT",1,45.57,10.54,-0.23,0.08,2.89,1.06,0,">1 nonsynonymous","N58S K87R",2
"lib1","SARS-CoV-2","TTTTGCACTAAGCAAC",1,59.12,9.98,-0.78,0.11,2.62,1.07,0,">1 nonsynonymous","G51A N151L",2
"lib1","SARS-CoV-2","TTTTGCAGAGCAAAAT",6,46.01,10.63,-0.13,0.06,2.84,1.12,0,"1 nonsynonymous","D97G",1
"lib1","SARS-CoV-2","TTTTGCATGTCAAACG",2,15.77,10.61,-0.16,0.1,2.81,1.14,0.01,">1 nonsynonymous","K128L F160A P197V",3
"lib1","SARS-CoV-2","TTTTGCCCCAGTCACT",4,122.27,9.98,-0.79,0.07,2.6,1.03,0,">1 nonsynonymous","I2K Y121M F185Y",3
"lib1","SARS-CoV-2","TTTTGCCCGGGAATTT",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I F17L A105P K132G",4
"lib1","SARS-CoV-2","TTTTGCCCTTTATAAA",7,14.29,6,-4.76,2,1.5,1.11,0,">1 nonsynonymous","S41R K56V R124S C150E",4
"lib1","SARS-CoV-2","TTTTGCCTAACAAAGT",2,4.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46D",1
"lib1","SARS-CoV-2","TTTTGCCTTAACCGAG",5,57.09,6.32,-4.44,0.52,1.5,1.25,0.02,">1 nonsynonymous","S36E K56P Y91G",3
"lib1","SARS-CoV-2","TTTTGCGACCAAGTAA",4,54.27,9.44,-1.32,0.2,1.54,1.2,0.01,">1 nonsynonymous","T3S A14H S29R K132W",4
"lib1","SARS-CoV-2","TTTTGCGAGAATTGTT",1,30.29,10.76,0,0.1,2.93,1.06,0.01,"wildtype","",0
"lib1","SARS-CoV-2","TTTTGCGGATAAGCAT",1,68.47,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","Y50M N92L",2
"lib1","SARS-CoV-2","TTTTGCTCTTCAGCAA",2,24.98,10.21,-0.56,0.06,2.97,1,0,">1 nonsynonymous","K26A F156R",2
"lib1","SARS-CoV-2","TTTTGGAAAATCGAGG",6,44.42,6,-4.76,1.73,1.5,1.13,0.03,">1 nonsynonymous","F12T F99N Y119G Q144A",4
"lib1","SARS-CoV-2","TTTTGGAAAGCGAATG",3,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y G83E L95S",3
"lib1","SARS-CoV-2","TTTTGGAAAGCGGACG",5,55.13,6,-4.76,2,3,1.19,0,">1 nonsynonymous","S36K N120T L131S K199Q",4
"lib1","SARS-CoV-2","TTTTGGAAAGGTGAGG",1,6.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L38M G51D P82H I104F",4
"lib1","SARS-CoV-2","TTTTGGAATGACGGGT",6,28.06,7.03,-3.74,0.4,1.5,1.22,0.04,">1 nonsynonymous","N13V F47L L162V",3
"lib1","SARS-CoV-2","TTTTGGAATTATATTT",6,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W D59G N92H N118P S129N E186I",6
"lib1","SARS-CoV-2","TTTTGGAGCAGTAAGC",13,98.52,6,-4.76,1.5,1.5,1.29,0.02,">1 nonsynonymous","W23M T85S F99T S139A T148S",5
"lib1","SARS-CoV-2","TTTTGGAGGAAGAAAA",3,2.89,NA,NA,NA,NA,NA,NA,"stop","Y21L L57* I142A H189R",4
"lib1","SARS-CoV-2","TTTTGGATCGACTCGC",2,6.18,6,-4.76,2,1.5,1.07,0.01,">1 nonsynonymous","P7A N13R Y39L G86C D90V G152C",6
"lib1","SARS-CoV-2","TTTTGGCAACAGACCA",5,84.71,7.63,-3.13,0.32,1.5,1.19,0.04,">1 nonsynonymous","S41R Y121D",2
"lib1","SARS-CoV-2","TTTTGGCATATCGAGA",2,60.27,10.51,-0.25,0.06,2.93,1,0,">1 nonsynonymous","R78P K87F",2
"lib1","SARS-CoV-2","TTTTGGCCTATGCCGA",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D90S S129L G174Y",4
"lib1","SARS-CoV-2","TTTTGGCGGGACACGA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","S41* V77K Q84L A105P T170F",5
"lib1","SARS-CoV-2","TTTTGGCTAATTGTTT",3,50.68,10.12,-0.64,0.07,2.9,1,0,">1 nonsynonymous","E10D D90L P149I T201E",4
"lib1","SARS-CoV-2","TTTTGGGAGTGTCACA",2,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88W N120M E186M",3
"lib1","SARS-CoV-2","TTTTGGGCTATTCAAG",4,47.83,10.49,-0.28,0.05,2.85,1.05,0,"1 nonsynonymous","T15M",1
"lib1","SARS-CoV-2","TTTTGGGTGGAAGATT",2,25.12,6,-4.76,2,1.5,1.22,0.02,">1 nonsynonymous","I28K Y50V G83S G101S K128D G155V",6
"lib1","SARS-CoV-2","TTTTGGTATACCGCAA",3,2.89,NA,NA,NA,NA,NA,NA,"stop","N1* A14W D90W N171* Q176E V182I",6
"lib1","SARS-CoV-2","TTTTGTAAGCAACTAG",27,131.8,6,-4.76,2,1.5,1.28,0.02,"1 nonsynonymous","L95H",1
"lib1","SARS-CoV-2","TTTTGTAAGCTATATA",4,27.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L D34G F99L V115E P197Q",5
"lib1","SARS-CoV-2","TTTTGTAATGATCCGC",4,23.12,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C61S P96Y K114R N120F A190R",5
"lib1","SARS-CoV-2","TTTTGTATAGTAATAG",5,17.58,6,-4.76,2,1.5,1.36,0.05,">1 nonsynonymous","S19F N58F T63F T100L V115G F160C",6
"lib1","SARS-CoV-2","TTTTGTATCAGCCTTA",6,86.36,10.65,-0.11,0.07,2.9,1.05,0,"1 nonsynonymous","S41A",1
"lib1","SARS-CoV-2","TTTTGTCCTAACCATT",2,8.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1F K56I G83I C158Q P169S",5
"lib1","SARS-CoV-2","TTTTGTCGACCTCAAA",2,26.61,10.42,-0.34,0.05,2.9,1.09,0,">1 nonsynonymous","A33T V37R",2
"lib1","SARS-CoV-2","TTTTGTCGCAGCAAAT",3,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R N120M",2
"lib1","SARS-CoV-2","TTTTGTGAAACAATCG",1,8.91,10.27,-0.5,0.48,2.83,1.12,0.01,"1 nonsynonymous","S184F",1
"lib1","SARS-CoV-2","TTTTGTTTCCTCCCAG",4,17.35,6,-4.76,2,1.5,1.4,0.04,">1 nonsynonymous","T3A R16T C61Y F99N N107K C158Y",6
"lib1","SARS-CoV-2","TTTTTAAAAAAAAGTG",3,18.11,6.02,-4.74,1.21,1.5,1.05,0.03,">1 nonsynonymous","F47S Y91S P149V",3
"lib1","SARS-CoV-2","TTTTTAAACAAAGCCT",2,44.96,6,-4.76,2,1.5,1.17,0.02,">1 nonsynonymous","R27S Y93L Y123S K132L N151G T170L",6
"lib1","SARS-CoV-2","TTTTTAAACCGAAAAG",7,41.34,6,-4.76,1.72,1.5,1.15,0.03,">1 nonsynonymous","N64M P82N Y91T",3
"lib1","SARS-CoV-2","TTTTTAAAGCACTATA",1,65.86,10.66,-0.1,0.05,2.92,1.04,0,">1 nonsynonymous","N64R T201Y",2
"lib1","SARS-CoV-2","TTTTTAAAGGGCCGCA",2,30.14,6,-4.76,2,1.5,1.09,0.04,">1 nonsynonymous","L5S A14C Y35H K48L Y93P W106T",6
"lib1","SARS-CoV-2","TTTTTAAATAGAACCG",8,95.31,6,-4.76,2,1.5,1.19,0.02,">1 nonsynonymous","F12C D68W K94Y",3
"lib1","SARS-CoV-2","TTTTTAAATTCGCGAA",3,46.85,9.94,-0.83,0.11,2.14,1.08,0,"1 nonsynonymous","L38T",1
"lib1","SARS-CoV-2","TTTTTAACATCAAATG",1,14.48,9.88,-0.89,0.18,2.26,1.03,0.01,">1 nonsynonymous","K48T D98G N110F N120M T201R",5
"lib1","SARS-CoV-2","TTTTTAACGAATAATG",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y F44L Y91A C150A N157S",5
"lib1","SARS-CoV-2","TTTTTAACGTAAGGCA",3,68.93,10.73,-0.03,0.09,2.91,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTAAGAAAGATCT",2,12.4,8.58,-2.18,0.37,1.5,1,0.06,">1 nonsynonymous","I88M I104A S200C",3
"lib1","SARS-CoV-2","TTTTTAATAAATACTA",1,6.89,9.31,-1.45,0.23,1.77,1.11,0.03,">1 nonsynonymous","S129A P161C",2
"lib1","SARS-CoV-2","TTTTTAATATGGATTT",1,9.43,6,-4.76,2,3,1.15,0,">1 nonsynonymous","N1L A22E D75L P133H P149Q",5
"lib1","SARS-CoV-2","TTTTTAATCGCCTGTG",4,74.81,9.11,-1.65,0.15,1.53,1.13,0.01,">1 nonsynonymous","Y123W P133S P149M Q163L",4
"lib1","SARS-CoV-2","TTTTTAATCGTTTAGT",2,10.8,10.68,-0.09,0.06,2.94,1.03,0,"1 nonsynonymous","S69T",1
"lib1","SARS-CoV-2","TTTTTAATGCAACAAG",2,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K Y50H Q84V K128F",4
"lib1","SARS-CoV-2","TTTTTACAAGGACGCG",2,18.05,6,-4.76,2,1.5,1.19,0.03,">1 nonsynonymous","I88H F160E",2
"lib1","SARS-CoV-2","TTTTTACAGAGGACAG",1,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P F160T",2
"lib1","SARS-CoV-2","TTTTTACCAGATCTTA",9,52.77,6,-4.76,2,1.5,1.14,0.01,">1 nonsynonymous","V11I D68R P149H",3
"lib1","SARS-CoV-2","TTTTTACCAGCAGAGA",3,34.27,6,-4.76,2,1.5,1.32,0.03,">1 nonsynonymous","C6D V71A P82Y A89W R136K",5
"lib1","SARS-CoV-2","TTTTTACCCCTTACCG",7,80.01,6,-4.76,2,1.5,1.32,0.04,">1 nonsynonymous","G51M C61K Y165N",3
"lib1","SARS-CoV-2","TTTTTACTCGCGAAAC",1,85.95,10.71,-0.05,0.06,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTAGATCCCATCA",4,26.09,6.31,-4.46,0.73,1.5,1.12,0.04,">1 nonsynonymous","N1K I88N",2
"lib1","SARS-CoV-2","TTTTTAGCAAACTCTT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H S41L I80K T148V G166I",5
"lib1","SARS-CoV-2","TTTTTAGCAGCCGAGG",10,88.21,10.76,0,0.07,2.89,1.08,0,"1 nonsynonymous","A192F",1
"lib1","SARS-CoV-2","TTTTTAGCCCCATGCT",1,62.57,10.23,-0.53,0.04,2.93,1,0,">1 nonsynonymous","D90C C195S",2
"lib1","SARS-CoV-2","TTTTTAGCGTTTAGTG",4,72.97,10.78,0.02,0.09,2.9,1.09,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTAGTCCGAAACT",4,25.92,6,-4.76,2,3,1.09,0,">1 nonsynonymous","S108P T170L",2
"lib1","SARS-CoV-2","TTTTTATAAAATAGCT",2,6.05,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F134I Q144V T201C",3
"lib1","SARS-CoV-2","TTTTTATAAGAACCAT",2,13.62,10.25,-0.51,0.08,2.9,1.01,0.01,">1 nonsynonymous","G9R S139M",2
"lib1","SARS-CoV-2","TTTTTATAGTATTAAA",3,47.84,8.38,-2.38,0.2,1.97,1.12,0.01,">1 nonsynonymous","N30W G117K E141T",3
"lib1","SARS-CoV-2","TTTTTATCATTAAATA",1,8.16,6,-4.76,2,3,1.05,0.01,">1 nonsynonymous","W23L E154Y",2
"lib1","SARS-CoV-2","TTTTTATCGGTACTAA",7,257.52,10.52,-0.24,0.04,2.88,1,0,"1 nonsynonymous","D90F",1
"lib1","SARS-CoV-2","TTTTTATTCAGAAAAA",7,36.62,6,-4.76,2,1.5,1.2,0.02,">1 nonsynonymous","C31Q V71A Q84L P149K G155L",5
"lib1","SARS-CoV-2","TTTTTATTCCACTATG",3,27.48,7.78,-2.99,0.32,1.5,1.27,0.03,">1 nonsynonymous","C6Y N40I E141S",3
"lib1","SARS-CoV-2","TTTTTCAAATAGCACG",3,13.54,9.2,-1.56,0.23,1.62,1.09,0.02,"1 nonsynonymous","D137T",1
"lib1","SARS-CoV-2","TTTTTCAACAAACACT",8,77.69,6,-4.76,1.33,1.5,1.21,0,">1 nonsynonymous","C61H L95S L162W P177C",4
"lib1","SARS-CoV-2","TTTTTCAAGCAGAAAT",4,11.88,6,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","L60R F99H N120L S129G V182R",5
"lib1","SARS-CoV-2","TTTTTCAGACAAATCC",2,89.38,10.09,-0.67,0.05,2.68,1.06,0,">1 nonsynonymous","P96S N120F",2
"lib1","SARS-CoV-2","TTTTTCAGCACAACTA",7,51.12,9.47,-1.29,0.14,1.72,1.1,0.01,">1 nonsynonymous","N1K K94F",2
"lib1","SARS-CoV-2","TTTTTCATAATTAGTA",1,1.55,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTCATTTAACTCA",6,45.33,8.78,-1.99,0.31,1.5,1.08,0.03,">1 nonsynonymous","F12W S139F",2
"lib1","SARS-CoV-2","TTTTTCATTTGTAAAA",5,106.41,6.06,-4.7,0.88,1.5,1.21,0.01,">1 nonsynonymous","T63E G83C N120V E141H Y175M",5
"lib1","SARS-CoV-2","TTTTTCCAAAAAGTTA",7,132.73,9.89,-0.87,0.09,2.4,1.01,0,">1 nonsynonymous","A14V L122W S139A",3
"lib1","SARS-CoV-2","TTTTTCCCGAAGTATC",5,65.26,9.22,-1.55,0.22,1.5,1.01,0.02,">1 nonsynonymous","F12N T100L",2
"lib1","SARS-CoV-2","TTTTTCCGCAAACCAA",12,143.28,6.81,-3.95,0.16,1.5,1.16,0,">1 nonsynonymous","Y39T C150M",2
"lib1","SARS-CoV-2","TTTTTCCTACATAACT",1,27.2,6,-4.76,1.16,1.5,1.15,0.03,">1 nonsynonymous","V71F R127Q G152S P169M Q176P",5
"lib1","SARS-CoV-2","TTTTTCCTGAATAAAA",2,31.14,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","K26S Y66L V103L",3
"lib1","SARS-CoV-2","TTTTTCCTTACATAAG",6,95.59,6.3,-4.47,0.48,1.5,1.18,0.01,">1 nonsynonymous","C6Y A18L T85E Y123W",4
"lib1","SARS-CoV-2","TTTTTCCTTGTTTACA",6,112.91,8.56,-2.21,0.09,2.85,1.06,0,"1 nonsynonymous","S113M",1
"lib1","SARS-CoV-2","TTTTTCGCCCACCGCG",1,31.98,10.63,-0.13,0.08,2.96,1.01,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTCGCCGCGTGCC",2,41.64,6.46,-4.31,0.62,1.5,1.3,0.02,">1 nonsynonymous","A14D C49V",2
"lib1","SARS-CoV-2","TTTTTCGCGACATAGA",3,23.94,6,-4.76,2,1.5,1.2,0.03,">1 nonsynonymous","N64L E76S Y123F R136S I142K",5
"lib1","SARS-CoV-2","TTTTTCGGCAAGTTAA",5,59.62,6.47,-4.3,0.5,1.5,1.22,0.02,"1 nonsynonymous","G86F",1
"lib1","SARS-CoV-2","TTTTTCTAGATCAAAG",2,41.21,8.63,-2.14,0.21,1.53,1.16,0.02,">1 nonsynonymous","K26L K87F R179K",3
"lib1","SARS-CoV-2","TTTTTCTATCTCAAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","A22* F156R",2
"lib1","SARS-CoV-2","TTTTTCTCCTACAAAT",1,20.91,9.67,-1.1,0.29,1.5,1,0.06,">1 nonsynonymous","A14E Y66L F134L F160L L188P",5
"lib1","SARS-CoV-2","TTTTTCTCGAACGCGG",6,88.54,10.19,-0.58,0.06,2.8,1.07,0,"1 nonsynonymous","P161S",1
"lib1","SARS-CoV-2","TTTTTCTTAGTTTATG",3,45.92,10.74,-0.03,0.08,2.87,1.09,0,"1 nonsynonymous","Y39E",1
"lib1","SARS-CoV-2","TTTTTCTTTATAGGAC",4,38.85,10.8,0.04,0.08,2.93,1.03,0,"1 nonsynonymous","P149S",1
"lib1","SARS-CoV-2","TTTTTGAAACTACCTG",6,57.2,6,-4.76,2,1.5,1.24,0.02,">1 nonsynonymous","A14F P149R G152I",3
"lib1","SARS-CoV-2","TTTTTGAAAGACTATC",6,60.44,10.17,-0.6,0.09,2.11,1.05,0,">1 nonsynonymous","T3S S45N K94C H189A",4
"lib1","SARS-CoV-2","TTTTTGAAGCGAGGAA",1,15.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I K128L L183C",3
"lib1","SARS-CoV-2","TTTTTGACAAAAAAAC",2,0.41,NA,NA,NA,NA,NA,NA,"stop","K56* K87D K128L I142F G174V",5
"lib1","SARS-CoV-2","TTTTTGAGCTTGCACT",3,1.43,NA,NA,NA,NA,NA,NA,"stop","S19R S43H K56V K114R S129* V153N",6
"lib1","SARS-CoV-2","TTTTTGATAAACACCG",4,98.74,10.73,-0.03,0.06,2.92,1.04,0,">1 nonsynonymous","Y39W N130E T201K",3
"lib1","SARS-CoV-2","TTTTTGCCCACATTAG",4,156.67,10.68,-0.09,0.04,2.92,1.04,0,">1 nonsynonymous","G9K S41L",2
"lib1","SARS-CoV-2","TTTTTGCCGCGAACAG",9,28.24,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5R A14T K56W F167M",4
"lib1","SARS-CoV-2","TTTTTGCGATTTAAAC",5,30.62,6,-4.76,2,1.5,1.28,0.03,">1 nonsynonymous","R16A V181G",2
"lib1","SARS-CoV-2","TTTTTGCGTTGCACAT",8,134.65,9.51,-1.25,0.1,1.7,1.14,0,">1 nonsynonymous","N4L R127H",2
"lib1","SARS-CoV-2","TTTTTGCTACCTTTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15N N58I G116*",3
"lib1","SARS-CoV-2","TTTTTGGACGAAGAAC",3,18.28,8.76,-2.01,0.18,2.24,1.07,0.01,">1 nonsynonymous","S41F S113G G152V",3
"lib1","SARS-CoV-2","TTTTTGGGATACGAGG",8,126.72,10.74,-0.02,0.04,2.94,1.04,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTGGGCACTCTGC",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68M K94F T201S",3
"lib1","SARS-CoV-2","TTTTTGGTAGAAGAAT",2,4.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113E",1
"lib1","SARS-CoV-2","TTTTTGTAATAATGGC",2,30.42,8.41,-2.35,0.17,1.5,1.05,0.01,">1 nonsynonymous","N4R S53Y T63V R78L I104L N118T",6
"lib1","SARS-CoV-2","TTTTTGTACTTACTTG",6,1.8,NA,NA,NA,NA,NA,NA,"stop","N1* S113V Y123I N130W G166L",5
"lib1","SARS-CoV-2","TTTTTGTTACCATGCG",1,2.02,NA,NA,NA,NA,NA,NA,"stop","N1G V37W P54K E135* N157R",5
"lib1","SARS-CoV-2","TTTTTGTTCAAAGAGA",3,68.31,6,-4.76,2,1.5,1.16,0.01,">1 nonsynonymous","C31K A42E D112K N120G R136T V173M",6
"lib1","SARS-CoV-2","TTTTTGTTCACCCTCT",7,94.73,6,-4.76,2,1.5,1.18,0.02,">1 nonsynonymous","P54R K87V S113I N157A",4
"lib1","SARS-CoV-2","TTTTTGTTTAACCAAA",9,1.53,NA,NA,NA,NA,NA,NA,"stop","N13* L95S N120R S139F Y165K Q176L",6
"lib1","SARS-CoV-2","TTTTTTAACGCTTTGA",2,3.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R127P",1
"lib1","SARS-CoV-2","TTTTTTAACGGTCTCT",2,39.59,6,-4.76,2,1.5,1.13,0.02,">1 nonsynonymous","V11M V71L Y91H P177V",4
"lib1","SARS-CoV-2","TTTTTTAAGCTTAAAT",2,6.44,6.64,-4.12,0.67,1.5,1.24,0.05,">1 nonsynonymous","G86D S129P",2
"lib1","SARS-CoV-2","TTTTTTAATGGCTTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* C31V K199T",3
"lib1","SARS-CoV-2","TTTTTTACACATGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R C49R F62R Y91I G146F F156L",6
"lib1","SARS-CoV-2","TTTTTTAGGGTCGGTA",11,249.83,10.6,-0.16,0.03,2.9,1.03,0,"1 nonsynonymous","A18E",1
"lib1","SARS-CoV-2","TTTTTTATACTCAGGA",2,17.24,8.46,-2.3,0.29,1.5,1.14,0.06,">1 nonsynonymous","E10V L131F P149R",3
"lib1","SARS-CoV-2","TTTTTTATAGTCGATA",3,46.85,10.27,-0.49,0.08,2.76,1,0,">1 nonsynonymous","Y35W C49V F160V P197A",4
"lib1","SARS-CoV-2","TTTTTTATCAAGGCCC",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122M F167S",2
"lib1","SARS-CoV-2","TTTTTTATTATCCTAG",1,8.6,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3V S29C D59F K87Y S139L",5
"lib1","SARS-CoV-2","TTTTTTATTTTGCGCA",1,21.31,10.74,-0.02,0.05,2.96,1.04,0,"synonymous","",0
"lib1","SARS-CoV-2","TTTTTTCATATGCACG",2,19.96,6,-4.76,2,1.5,1.11,0.01,">1 nonsynonymous","G9V K87G Y93R N157I",4
"lib1","SARS-CoV-2","TTTTTTCGTAATCGTG",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K L57S Y93K N107F T201C",5
"lib1","SARS-CoV-2","TTTTTTGTATCGTTAA",4,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y D90Y C158V",3
"lib1","SARS-CoV-2","TTTTTTTCAATACCTA",1,7.07,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K48E K94Q N120W S129L K198T",5
"lib1","SARS-CoV-2","TTTTTTTCCAAGTTCG",1,22.58,10.38,-0.39,0.11,2.91,1.02,0.01,">1 nonsynonymous","V37A S43L P96T",3
"lib1","SARS-CoV-2","TTTTTTTGAGCAGGCG",6,50.62,6.31,-4.45,0.48,1.5,1.18,0.02,">1 nonsynonymous","I2S F17M K114A R127Q",4
"lib1","SARS-CoV-2","TTTTTTTGGCTGCGAC",4,108.51,10.74,-0.03,0.04,2.96,1.02,0,"wildtype","",0
"lib1","SARS-CoV-2","TTTTTTTGTGAGGCCG",11,43.59,6,-4.76,2,1.5,1.2,0.01,">1 nonsynonymous","V37Y L60E P96S G116T L125R V180I",6
"lib1","SARS-CoV-2","TTTTTTTTAATAATCA",3,25.74,8.49,-2.28,0.3,1.6,1.28,0.03,">1 nonsynonymous","S41H Y66I T100Y G172S",4
"lib1","SARS-CoV-2","TTTTTTTTTATATTTA",10,92.15,10.68,-0.08,0.06,2.89,1.09,0,"1 nonsynonymous","N110L",1
"lib2","SARS-CoV-2","AAAAAAAAAAAAGTAA",14,123.95,10.82,-0.02,0.05,2.93,1.08,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","AAAAAAAAAACAACAT",3,30.26,10.06,-0.77,0.05,2.87,1.09,0,">1 nonsynonymous","L5Y A42S G83L F156Y",4
"lib2","SARS-CoV-2","AAAAAAAAAATAAGGA",1,5.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S C49L P96H T148S",4
"lib2","SARS-CoV-2","AAAAAAAAAATACAGA",3,47.62,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G51W K87G P96I",3
"lib2","SARS-CoV-2","AAAAAAAAAATGCGGT",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L L95R E186Y",3
"lib2","SARS-CoV-2","AAAAAAAAACCAAATT",6,111.58,10.4,-0.44,0.06,2.81,1.18,0,">1 nonsynonymous","G83Y G155S T201K",3
"lib2","SARS-CoV-2","AAAAAAAAACTAACAG",8,35.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50H V103S",2
"lib2","SARS-CoV-2","AAAAAAAAACTGAGAC",1,4.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","AAAAAAAAAGCTGCCT",5,21.43,8.73,-2.11,0.26,1.6,1.16,0.04,">1 nonsynonymous","K48L T55V G117E T140S P149S",5
"lib2","SARS-CoV-2","AAAAAAAAATAGACAT",4,35.94,8.82,-2.02,0.18,1.67,1.22,0.01,">1 nonsynonymous","T3Q Y165L",2
"lib2","SARS-CoV-2","AAAAAAAAATAGCACC",10,116.94,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Y66L Y119K F134W V173T",4
"lib2","SARS-CoV-2","AAAAAAAAATCCGAAA",7,125.38,10.81,-0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAAAAATTATTCA",3,28.34,10.03,-0.8,0.1,2.7,1.11,0.01,">1 nonsynonymous","T63R G152P",2
"lib2","SARS-CoV-2","AAAAAAAACAAGAAAG",1,17.6,7.99,-2.85,0.3,1.91,1.19,0.02,">1 nonsynonymous","P7W F62S L122V L125P",4
"lib2","SARS-CoV-2","AAAAAAAACGCGGTGT",1,13.71,9.56,-1.27,0.16,1.94,1,0.01,">1 nonsynonymous","V77M P133Q",2
"lib2","SARS-CoV-2","AAAAAAAACTTGTGCG",2,12.35,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","E10M T55M N107W C158R",4
"lib2","SARS-CoV-2","AAAAAAAACTTTAACT",2,63.62,10.72,-0.12,0.05,2.91,1.06,0,"1 nonsynonymous","N110P",1
"lib2","SARS-CoV-2","AAAAAAAAGAGCGTAA",2,61.71,10.47,-0.37,0.05,2.86,1.07,0,">1 nonsynonymous","F8M L60V",2
"lib2","SARS-CoV-2","AAAAAAAAGCTACCCG",3,106.22,10.28,-0.55,0.05,2.8,1.03,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","AAAAAAAAGTGTAGAA",2,43.7,10.58,-0.25,0.05,2.93,1.02,0,"1 nonsynonymous","K94A",1
"lib2","SARS-CoV-2","AAAAAAAAGTTGACAT",13,179.04,10.83,-0.01,0.03,2.94,1.06,0,"1 nonsynonymous","K198Y",1
"lib2","SARS-CoV-2","AAAAAAAATAATGAAC",1,5.31,11.47,0.63,0.14,2.95,1.03,0.01,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","AAAAAAAATACTCGTA",1,45.9,10.19,-0.65,0.06,2.68,1.1,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","AAAAAAAATCTAAAAG",1,7.18,6,-4.84,1.84,3,1,0,">1 nonsynonymous","R16E D34A S41W Y50A Y93L",5
"lib2","SARS-CoV-2","AAAAAAAATCTAACCA",5,7.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V11P C49P N157T",3
"lib2","SARS-CoV-2","AAAAAAAATGAACACT",7,163.33,10.69,-0.15,0.03,2.98,1.03,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","AAAAAAAATTCATACA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4* P82S Y143G",3
"lib2","SARS-CoV-2","AAAAAAAATTTTAATA",8,125.95,9.58,-1.25,0.04,2.93,1.05,0,">1 nonsynonymous","R27K T170N",2
"lib2","SARS-CoV-2","AAAAAAAATTTTTAAT",1,5.51,9.49,-1.34,0.22,2.32,1,0.02,">1 nonsynonymous","V65A A81I F156P",3
"lib2","SARS-CoV-2","AAAAAAACAACATAAC",3,30.44,10.86,0.03,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAAACAATTCTGG",8,62.17,6,-4.84,2,3,1.19,0,">1 nonsynonymous","W106T P133L Q144L",3
"lib2","SARS-CoV-2","AAAAAAACACATGCGA",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151G F167Y V173S",3
"lib2","SARS-CoV-2","AAAAAAACACCCTACA",5,46.99,10.15,-0.68,0.05,2.78,1.06,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","AAAAAAACACTAATAA",6,70.46,6,-4.84,1.3,1.5,1.13,0.01,">1 nonsynonymous","V65D G101T N157V",3
"lib2","SARS-CoV-2","AAAAAAACAGACGTAC",2,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N Q144H Y159R F167S",4
"lib2","SARS-CoV-2","AAAAAAACAGTAAAAA",6,23.69,7.28,-3.55,0.48,1.5,1.04,0.04,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","AAAAAAACAGTACGAA",1,114.85,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y39N A81I K94M",3
"lib2","SARS-CoV-2","AAAAAAACATGCAAAA",5,53.24,10.6,-0.23,0.05,2.9,1.02,0,">1 nonsynonymous","A42N D97I",2
"lib2","SARS-CoV-2","AAAAAAACATGTTATA",6,43.24,6.51,-4.33,0.57,1.5,1.23,0.03,">1 nonsynonymous","F12A D98V",2
"lib2","SARS-CoV-2","AAAAAAACCAAAGCTA",11,62.39,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","S45A C158L V181D",3
"lib2","SARS-CoV-2","AAAAAAACCAATAATA",4,69.91,9.17,-1.67,0.05,2.9,1.05,0,"1 nonsynonymous","G117Y",1
"lib2","SARS-CoV-2","AAAAAAACCATTCTAG",1,0.71,NA,NA,NA,NA,NA,NA,"stop","F12M R27D G83A G86* R124L Y143A",6
"lib2","SARS-CoV-2","AAAAAAACCCGGGTTC",4,41.24,8.97,-1.87,0.19,1.73,1.12,0.01,">1 nonsynonymous","F44S Y50H",2
"lib2","SARS-CoV-2","AAAAAAACCGCGAAAG",2,46.58,9.57,-1.27,0.1,1.75,1.04,0,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","AAAAAAACGAAATAAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N157K Y159N",2
"lib2","SARS-CoV-2","AAAAAAACGTACGGGC",7,152.87,10.67,-0.16,0.04,2.96,1.05,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AAAAAAACTAATTCCC",5,73.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44I N92E",2
"lib2","SARS-CoV-2","AAAAAAACTCTCAGGA",4,27.18,10.2,-0.64,0.07,2.62,1.01,0,">1 nonsynonymous","K48S N110S L162M",3
"lib2","SARS-CoV-2","AAAAAAAGAAAAATAT",6,6.95,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","AAAAAAAGAAACTGAA",4,81.67,10.61,-0.23,0.03,2.94,1.06,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","AAAAAAAGAATATTAT",3,109.83,6,-4.84,1.04,1.5,1.2,0.01,">1 nonsynonymous","N1P K87V T100I N118S Y175K",5
"lib2","SARS-CoV-2","AAAAAAAGAATCCAAA",3,173.58,10.73,-0.11,0.03,2.95,1.06,0,"1 nonsynonymous","N109L",1
"lib2","SARS-CoV-2","AAAAAAAGAATGATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128C T201Q",2
"lib2","SARS-CoV-2","AAAAAAAGACCGGTTT",3,18.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44S Y91L W106E",3
"lib2","SARS-CoV-2","AAAAAAAGACGACAAA",6,15.55,8.79,-2.05,0.25,2.53,1.17,0.02,">1 nonsynonymous","T15A E141L Q144E F156T",4
"lib2","SARS-CoV-2","AAAAAAAGAGTACTCC",1,0.37,NA,NA,NA,NA,NA,NA,"stop","I2N T85F D97* N171G",4
"lib2","SARS-CoV-2","AAAAAAAGATGTATAT",3,195.27,8.39,-2.45,0.11,1.98,1.11,0,">1 nonsynonymous","L60S Q163R Q176L",3
"lib2","SARS-CoV-2","AAAAAAAGCGCTAACA",5,58.87,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","A81L D98I A105S",3
"lib2","SARS-CoV-2","AAAAAAAGCGTTAAAA",2,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A S19A C102R P161Y",4
"lib2","SARS-CoV-2","AAAAAAAGGTCAACCG",7,150.12,9.66,-1.17,0.05,2.92,1.05,0,">1 nonsynonymous","I2T N64K L122K I142N G155D",5
"lib2","SARS-CoV-2","AAAAAAAGTCCAGTTC",2,8.97,10.92,0.08,0.1,3,1.01,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","AAAAAAAGTTGCACGG",2,77.84,9.41,-1.43,0.1,2.77,1.13,0,">1 nonsynonymous","A22D G117A Q168R T201R",4
"lib2","SARS-CoV-2","AAAAAAATAACTGAGG",3,54.85,8.4,-2.43,0.15,2.69,1.04,0.01,">1 nonsynonymous","Y119T L125P",2
"lib2","SARS-CoV-2","AAAAAAATAGAACTAT",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M C150I",2
"lib2","SARS-CoV-2","AAAAAAATAGACCACT",8,161.08,9.77,-1.06,0.06,2.04,1.04,0,">1 nonsynonymous","G9P A89S T100A",3
"lib2","SARS-CoV-2","AAAAAAATATAATTAC",9,35.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M D98V N110M Y123I",4
"lib2","SARS-CoV-2","AAAAAAATATACTAAG",2,47.09,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","K94F Y119L G155C",3
"lib2","SARS-CoV-2","AAAAAAATATCAAGTT",1,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","AAAAAAATATTTCCCC",10,94.79,10.72,-0.12,0.06,2.92,1.1,0,"1 nonsynonymous","N110I",1
"lib2","SARS-CoV-2","AAAAAAATCAGACATT",3,8.44,10.64,-0.19,0.35,2.6,1.06,0.03,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","AAAAAAATCATGAGCA",13,149.9,10.89,0.05,0.05,2.95,1.08,0,"1 nonsynonymous","I104F",1
"lib2","SARS-CoV-2","AAAAAAATCGAAAAAG",1,10.72,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I72E G86L K94H N171F V180C",5
"lib2","SARS-CoV-2","AAAAAAATGCATATAA",5,88.34,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V32S L60R I142L P149F R179S",5
"lib2","SARS-CoV-2","AAAAAAATGCGCCCCA",2,118.86,9.88,-0.95,0.03,2.9,1.08,0,">1 nonsynonymous","N118S T201E",2
"lib2","SARS-CoV-2","AAAAAAATGCTTATTG",11,88.24,9.74,-1.1,0.09,2.22,1.02,0,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","AAAAAAATGGACAGTG",2,5.4,9.89,-0.95,0.23,2.3,1,0.02,">1 nonsynonymous","T63D K87R D98A E186I",4
"lib2","SARS-CoV-2","AAAAAAATGGTAAACC",4,4.01,NA,NA,NA,NA,NA,NA,"stop","E76* L131R",2
"lib2","SARS-CoV-2","AAAAAAATTAAATCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93V Y119D T201Q",3
"lib2","SARS-CoV-2","AAAAAAATTCAAGATA",10,2.28,NA,NA,NA,NA,NA,NA,"stop","K56* Y143S G166Y",3
"lib2","SARS-CoV-2","AAAAAAATTCCTTGGG",3,36.42,10.09,-0.75,0.1,2.27,1.1,0.01,">1 nonsynonymous","P133T N151F",2
"lib2","SARS-CoV-2","AAAAAAATTGGGATGT",4,38.93,8.5,-2.33,0.16,1.62,1.09,0.01,">1 nonsynonymous","Y39N Y91R N130W",3
"lib2","SARS-CoV-2","AAAAAAATTTCTCCAT",6,131.47,10.56,-0.27,0.05,2.89,1.06,0,">1 nonsynonymous","N171V S184E",2
"lib2","SARS-CoV-2","AAAAAACAAAAAAATG",10,82.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17E K26L I88C D97R C158A",5
"lib2","SARS-CoV-2","AAAAAACAAACAATAA",7,58.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A89L I142Q R179Y",3
"lib2","SARS-CoV-2","AAAAAACAAACTCCTA",11,80.15,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Y39H R127K V173S L183N",4
"lib2","SARS-CoV-2","AAAAAACAACCCATCA",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P Y123P P161F",3
"lib2","SARS-CoV-2","AAAAAACAACGCATAA",3,95.3,10.01,-0.82,0.05,2.76,1.05,0,">1 nonsynonymous","T63V Y91I",2
"lib2","SARS-CoV-2","AAAAAACAAGACATAG",13,76.36,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P82H K94E W106R",3
"lib2","SARS-CoV-2","AAAAAACAAGCTGGCA",5,138.5,10.69,-0.15,0.04,2.92,1.08,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AAAAAACAAGTACGTG",2,10.57,6,-4.84,1.28,3,1.15,0.02,">1 nonsynonymous","G9C N92E N151I",3
"lib2","SARS-CoV-2","AAAAAACAATACAACG",1,13.03,8.12,-2.72,0.28,1.55,1.15,0.03,">1 nonsynonymous","W106R G155F N171Y",3
"lib2","SARS-CoV-2","AAAAAACAATGATTGC",10,124.16,10.87,0.04,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAACAATTGAAGC",8,25.42,8.17,-2.67,0.28,1.5,1.02,0.04,">1 nonsynonymous","S41Q A81V F185T",3
"lib2","SARS-CoV-2","AAAAAACAATTGGATA",8,32.69,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N13R R124I E186D",3
"lib2","SARS-CoV-2","AAAAAACACAGAAAGT",3,13.21,10.82,-0.02,0.07,2.93,1.09,0,"1 nonsynonymous","N1D",1
"lib2","SARS-CoV-2","AAAAAACACAGAGCCA",2,34.91,10.74,-0.09,0.03,2.98,1.03,0,">1 nonsynonymous","G9K V37K",2
"lib2","SARS-CoV-2","AAAAAACACAGGAAAT",12,83.21,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R73M N107Y Y121L L131T",4
"lib2","SARS-CoV-2","AAAAAACACAGTAGGA",9,122.25,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L60F I72K P169S",3
"lib2","SARS-CoV-2","AAAAAACACCTGGATA",8,77.32,8.27,-2.57,0.07,2.75,1.06,0,">1 nonsynonymous","R73E T148Y",2
"lib2","SARS-CoV-2","AAAAAACACTAACATT",1,0.46,NA,NA,NA,NA,NA,NA,"stop","F12E S36* A42S N64Y Y123Q H189D",6
"lib2","SARS-CoV-2","AAAAAACACTATAGCA",2,15.57,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","E10Y N157Y",2
"lib2","SARS-CoV-2","AAAAAACAGATAAGTG",3,17.07,7.42,-3.42,0.26,1.5,1.23,0.02,">1 nonsynonymous","Y35H A105C L188M T201L",4
"lib2","SARS-CoV-2","AAAAAACAGCAACTAA",4,10.84,6.13,-4.71,0.35,2.52,1.12,0,">1 nonsynonymous","G83M V103A P149Q",3
"lib2","SARS-CoV-2","AAAAAACAGTATTAGA",3,43.57,10.83,0,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAACATCTTAAAT",4,96.39,10.14,-0.69,0.06,2.55,1.09,0,">1 nonsynonymous","K56A F99L",2
"lib2","SARS-CoV-2","AAAAAACCAATCAGTG",2,32.06,10.22,-0.62,0.06,2.84,1.03,0,">1 nonsynonymous","R27M G83D",2
"lib2","SARS-CoV-2","AAAAAACCATACAAAC",3,112.26,9.91,-0.93,0.04,2.95,1.03,0,">1 nonsynonymous","C61G P169V",2
"lib2","SARS-CoV-2","AAAAAACCCATTAGTA",3,50.49,9.57,-1.27,0.07,2.87,1.08,0,">1 nonsynonymous","G155T G166S",2
"lib2","SARS-CoV-2","AAAAAACCGAACTATT",2,11.41,10.26,-0.57,0.15,2.63,1.09,0.01,">1 nonsynonymous","N24S A81N A190E",3
"lib2","SARS-CoV-2","AAAAAACCGATGGCTA",3,35.95,10.33,-0.5,0.07,2.95,1.08,0,">1 nonsynonymous","T63V I138T F156I",3
"lib2","SARS-CoV-2","AAAAAACCGTTTCTTT",10,158.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25L S43T G74K I104N Y178N",5
"lib2","SARS-CoV-2","AAAAAACCTAATGAAT",13,243.68,10.91,0.07,0.05,2.97,1.05,0,">1 nonsynonymous","I138L Q163K",2
"lib2","SARS-CoV-2","AAAAAACCTGAACGAT",6,58.64,10.78,-0.05,0.12,2.76,1.03,0,">1 nonsynonymous","P96S L122Q",2
"lib2","SARS-CoV-2","AAAAAACCTGTACACA",3,35.93,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I28L Y35S R73K E141I Y165S",5
"lib2","SARS-CoV-2","AAAAAACCTTTAACCC",1,12.17,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","T63R I80R I88K P96N",4
"lib2","SARS-CoV-2","AAAAAACGACTTAACC",3,6.81,6.61,-4.22,0.18,2.39,1.1,0,">1 nonsynonymous","I2L A33I F99M A105V P169K",5
"lib2","SARS-CoV-2","AAAAAACGCCATAATG",7,66.86,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y50L G101H",2
"lib2","SARS-CoV-2","AAAAAACGCGACAAGA",1,18.95,9.2,-1.63,0.14,2.54,1,0.01,">1 nonsynonymous","T15L Y143M",2
"lib2","SARS-CoV-2","AAAAAACGCTCCAATG",2,32.07,10.78,-0.06,0.05,2.86,1.12,0,">1 nonsynonymous","N64Q T140M",2
"lib2","SARS-CoV-2","AAAAAACGGCACATTG",3,16.66,10.94,0.1,0.09,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAACGGTAGTGCC",4,27.31,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I88V Y93N N171L",3
"lib2","SARS-CoV-2","AAAAAACGTACTAACT",8,165.32,8.86,-1.97,0.05,2.85,1.11,0,">1 nonsynonymous","K48A Y119L",2
"lib2","SARS-CoV-2","AAAAAACTAAAAATAT",2,4.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","AAAAAACTAATTTTCT",8,1.68,NA,NA,NA,NA,NA,NA,"stop","S19T K48* E141A G155Y",4
"lib2","SARS-CoV-2","AAAAAACTAGAAAGAC",5,42.4,9.73,-1.11,0.11,1.92,1.13,0,">1 nonsynonymous","V37F V181F",2
"lib2","SARS-CoV-2","AAAAAACTAGAAGGCC",4,61.52,10.9,0.06,0.06,2.95,1.07,0,"1 nonsynonymous","V153R",1
"lib2","SARS-CoV-2","AAAAAACTAGGAGACT",4,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G R136S L183S",3
"lib2","SARS-CoV-2","AAAAAACTATACCACC",3,37.35,10.16,-0.67,0.07,2.95,1.04,0,">1 nonsynonymous","S36R N118D P197S",3
"lib2","SARS-CoV-2","AAAAAACTCCGTAGGC",4,0,NA,NA,NA,NA,NA,NA,"stop","Y39H T55* F70K D90N F99V V180W",6
"lib2","SARS-CoV-2","AAAAAACTCTGGATGG",5,30.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4M D68R V77C E154F",4
"lib2","SARS-CoV-2","AAAAAACTGACCATGC",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58E G117F N130R K199I",4
"lib2","SARS-CoV-2","AAAAAACTGTTAACCA",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71R K87G G116I",3
"lib2","SARS-CoV-2","AAAAAACTGTTAAGAC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","F99Y F156*",2
"lib2","SARS-CoV-2","AAAAAACTTGAAAATC",6,67.91,9.21,-1.63,0.1,1.82,1.05,0,">1 nonsynonymous","E10T V32M V65R A190E",4
"lib2","SARS-CoV-2","AAAAAACTTTAAATAG",11,136.24,10.21,-0.62,0.04,2.8,1.04,0,">1 nonsynonymous","P7Y T55A T85G T201R",4
"lib2","SARS-CoV-2","AAAAAACTTTCATGAT",7,0.82,NA,NA,NA,NA,NA,NA,"stop","K87R D137*",2
"lib2","SARS-CoV-2","AAAAAAGAAAAATAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L38Q K87M T100* N118S",4
"lib2","SARS-CoV-2","AAAAAAGAAAAGAAAT",8,31.09,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D34G Y50S",2
"lib2","SARS-CoV-2","AAAAAAGAAAATCGTA",8,191.55,10.87,0.04,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAAGAACGCGTAA",3,60.63,10.31,-0.53,0.09,2.49,1.05,0,">1 nonsynonymous","T15G V103I S147P",3
"lib2","SARS-CoV-2","AAAAAAGAAGATCCCA",12,145.66,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S19L L162Y",2
"lib2","SARS-CoV-2","AAAAAAGAAGGCAGCC",10,353.14,9.92,-0.91,0.07,2.27,1.05,0,">1 nonsynonymous","L57K K132G",2
"lib2","SARS-CoV-2","AAAAAAGAATACCATC",5,47.43,10.85,0.01,0.06,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAAAGAATATCTAA",1,22.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39A P149S V181F",3
"lib2","SARS-CoV-2","AAAAAAGAATTAAGGG",4,8.3,8.57,-2.27,0.55,1.5,1,0.07,">1 nonsynonymous","A18K C31T K48P",3
"lib2","SARS-CoV-2","AAAAAAGAGAAGACCG",4,30.5,6.05,-4.78,0.61,1.5,1.06,0.01,">1 nonsynonymous","S69V Q84L Y119R Y159C",4
"lib2","SARS-CoV-2","AAAAAAGAGAATATAC",6,21.53,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G101C V182K",2
"lib2","SARS-CoV-2","AAAAAAGAGAGGCTAT",1,51.25,10.29,-0.54,0.05,2.94,1.05,0,">1 nonsynonymous","C61Q D75L",2
"lib2","SARS-CoV-2","AAAAAAGAGCAATAAT",4,11.55,7.32,-3.52,1.5,3,1.06,0.01,">1 nonsynonymous","V103W Y121Q L131C P197M",4
"lib2","SARS-CoV-2","AAAAAAGAGCACACTT",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V N107Y",2
"lib2","SARS-CoV-2","AAAAAAGATAACCTGA",12,25.95,NA,NA,NA,NA,NA,NA,"stop","K94N S113* Q176R",3
"lib2","SARS-CoV-2","AAAAAAGATGTTAGAC",1,41.93,9.96,-0.87,0.08,2.78,1.03,0,">1 nonsynonymous","L95M V115M S164Y",3
"lib2","SARS-CoV-2","AAAAAAGATTGACATA",3,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E E76R Y93V A105R A190C",5
"lib2","SARS-CoV-2","AAAAAAGATTGATTCA",8,105.31,9.91,-0.93,0.09,2.09,1.03,0,">1 nonsynonymous","T46I G83S D90S S129F",4
"lib2","SARS-CoV-2","AAAAAAGATTTGTATG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35V I88* Q144P",3
"lib2","SARS-CoV-2","AAAAAAGCAAGCCAAC",2,13.9,9.76,-1.08,0.06,2.97,1,0,"1 nonsynonymous","G74S",1
"lib2","SARS-CoV-2","AAAAAAGCAATCAAAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T15S T63Y L122* T148N N157L P177A",6
"lib2","SARS-CoV-2","AAAAAAGCCTTCTTAG",10,201.86,8.48,-2.36,0.1,2.7,1.08,0,">1 nonsynonymous","L5S F44D G116R G166Q",4
"lib2","SARS-CoV-2","AAAAAAGCGGAGTACG",5,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N D90Y N107D",3
"lib2","SARS-CoV-2","AAAAAAGCGTATATCA",6,69.47,10.81,-0.03,0.03,2.95,1.04,0,"1 nonsynonymous","S147Y",1
"lib2","SARS-CoV-2","AAAAAAGCGTTATAGG",3,3.24,NA,NA,NA,NA,NA,NA,"stop","T63* S139N",2
"lib2","SARS-CoV-2","AAAAAAGCTAATATGT",1,5.9,8.34,-2.49,0.34,2.49,1.38,0.03,"1 nonsynonymous","C49A",1
"lib2","SARS-CoV-2","AAAAAAGCTTTCATTA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L E76N",2
"lib2","SARS-CoV-2","AAAAAAGGATCAAATT",6,63.46,8.05,-2.78,0.31,1.5,1.04,0.03,">1 nonsynonymous","P54D E154S Y165V",3
"lib2","SARS-CoV-2","AAAAAAGGATGCTTCT",15,139.84,6.06,-4.78,1,1.5,1.19,0.02,">1 nonsynonymous","N40Y S113P",2
"lib2","SARS-CoV-2","AAAAAAGGATTGAGAT",4,70.01,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P96L A145S G152C",3
"lib2","SARS-CoV-2","AAAAAAGGCCTTAAAC",6,22.28,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9K V182Y",2
"lib2","SARS-CoV-2","AAAAAAGGCGTGAACC",7,140.23,6,-4.84,1.28,1.5,1.25,0.01,">1 nonsynonymous","I2S S41G F70L L122S I142T",5
"lib2","SARS-CoV-2","AAAAAAGGTGAAATAC",5,52.74,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S69E D90Y D98C N120I P177W",5
"lib2","SARS-CoV-2","AAAAAAGGTTCTAGTT",10,141.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1S F44T G86Y Y165S",4
"lib2","SARS-CoV-2","AAAAAAGTAGTGACAG",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92A D97W R127H",3
"lib2","SARS-CoV-2","AAAAAAGTATAAATTG",4,96.87,8.94,-1.9,0.07,2.83,1.12,0,">1 nonsynonymous","N118Y P169S",2
"lib2","SARS-CoV-2","AAAAAAGTATTTACAA",12,40.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25P S41F D68M V77N",4
"lib2","SARS-CoV-2","AAAAAAGTCATCTATA",3,2.48,NA,NA,NA,NA,NA,NA,"stop","N24T S45R K56P P96H V115* P149K",6
"lib2","SARS-CoV-2","AAAAAAGTCTACAAGG",7,72.97,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","L95Q",1
"lib2","SARS-CoV-2","AAAAAAGTCTTAGCTG",2,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F W23R K56S N64V D90R V115N G166V",7
"lib2","SARS-CoV-2","AAAAAAGTGAGTGTAT",1,9.85,9.61,-1.23,0.31,1.7,1.1,0.03,">1 nonsynonymous","F12V W106R",2
"lib2","SARS-CoV-2","AAAAAAGTGTCTAGGC",7,44.67,8.42,-2.42,0.09,2.25,1.09,0,"1 nonsynonymous","D112T",1
"lib2","SARS-CoV-2","AAAAAAGTTGATATGC",5,60.95,8.77,-2.07,0.07,2.02,1.09,0,">1 nonsynonymous","S41K N64Y R73M T100E",4
"lib2","SARS-CoV-2","AAAAAATAAAAAAATT",1,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151A N157I",2
"lib2","SARS-CoV-2","AAAAAATAAACTCTAA",8,66.21,6.43,-4.41,0.47,1.5,1.15,0.02,">1 nonsynonymous","T100D W106R K114Q Q176T P191G",5
"lib2","SARS-CoV-2","AAAAAATAAAGGGATG",9,234.97,10.66,-0.18,0.02,2.97,1.04,0,"1 nonsynonymous","S164V",1
"lib2","SARS-CoV-2","AAAAAATACAATTAAC",9,118.01,10.84,0,0.06,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAAATACACCTTAA",17,358.67,10.8,-0.04,0.03,2.95,1.06,0,">1 nonsynonymous","G9A V65L",2
"lib2","SARS-CoV-2","AAAAAATACGTACATA",4,111.83,10.75,-0.09,0.03,2.93,1.07,0,"1 nonsynonymous","F160C",1
"lib2","SARS-CoV-2","AAAAAATACTTCGTCC",3,36.08,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","F8C P149N Y175A",3
"lib2","SARS-CoV-2","AAAAAATAGAATCATA",3,31.98,8.2,-2.64,0.17,1.72,1.11,0.01,">1 nonsynonymous","N4K A18W Y39L C102I G166S",5
"lib2","SARS-CoV-2","AAAAAATAGACTGCTT",12,89.11,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G86P E141D",2
"lib2","SARS-CoV-2","AAAAAATAGATATAAG",3,132.53,9.85,-0.99,0.07,2.29,1.05,0,">1 nonsynonymous","N58K D90V",2
"lib2","SARS-CoV-2","AAAAAATAGGACATAC",6,0.59,NA,NA,NA,NA,NA,NA,"stop","V65* Y123K",2
"lib2","SARS-CoV-2","AAAAAATAGGACCACT",1,19.92,7.22,-3.62,0.19,1.5,1.03,0.01,">1 nonsynonymous","D112S P149K",2
"lib2","SARS-CoV-2","AAAAAATAGGCCACCA",10,218.24,10.18,-0.66,0.03,2.75,1.04,0,">1 nonsynonymous","Y39Q N107G",2
"lib2","SARS-CoV-2","AAAAAATATATATCAG",1,18.97,6,-4.84,0.61,3,1.14,0,">1 nonsynonymous","Y165D G174A",2
"lib2","SARS-CoV-2","AAAAAATATCTACGGC",5,57.77,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C31A K94T Y143T",3
"lib2","SARS-CoV-2","AAAAAATCAAAATTCG",16,153.19,10.85,0.01,0.05,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAAATCAAATACAA",1,10.09,6,-4.84,2,1.5,1.1,0.07,">1 nonsynonymous","I2D P133M Y175K P177T S200I",5
"lib2","SARS-CoV-2","AAAAAATCAAATAGAG",4,17.53,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D34P A42I G117D S139L Y165D",5
"lib2","SARS-CoV-2","AAAAAATCAACGCAAC",4,53.09,6.06,-4.78,0.54,1.5,1.08,0.01,">1 nonsynonymous","G74C D97L F167K",3
"lib2","SARS-CoV-2","AAAAAATCAATCATCT",14,262.54,10.65,-0.19,0.03,2.87,1.1,0,">1 nonsynonymous","A42T S139T",2
"lib2","SARS-CoV-2","AAAAAATCACACCCAA",6,27.7,9.71,-1.13,0.14,1.91,1.12,0.01,"1 nonsynonymous","R25K",1
"lib2","SARS-CoV-2","AAAAAATCACGGGAAA",7,3.77,NA,NA,NA,NA,NA,NA,"stop","V37* N157M",2
"lib2","SARS-CoV-2","AAAAAATCCTACATCC",16,128.45,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","F12A Q84N N107M V182A",4
"lib2","SARS-CoV-2","AAAAAATCCTCCTCGA",7,13.24,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S41L L95Q F167L",3
"lib2","SARS-CoV-2","AAAAAATCGGCGGTTA",1,14.7,10.24,-0.59,0.32,1.67,1,0.05,"1 nonsynonymous","W23M",1
"lib2","SARS-CoV-2","AAAAAATCGTCCTAAA",7,16.5,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D90G L131R C158P V181P",4
"lib2","SARS-CoV-2","AAAAAATCTCACCGAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","D98* I142K P149K",3
"lib2","SARS-CoV-2","AAAAAATCTGATGTAA",9,123.14,9.54,-1.3,0.07,2.76,1.03,0,">1 nonsynonymous","G9L D90Y F156P",3
"lib2","SARS-CoV-2","AAAAAATCTTTGGAGT",1,4.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","AAAAAATCTTTTCTTT",5,153.65,10.82,-0.02,0.05,2.95,1.04,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","AAAAAATGAGTTGTTA",6,8.01,NA,NA,NA,NA,NA,NA,"stop","C49* N120R E141T",3
"lib2","SARS-CoV-2","AAAAAATGATAAAATA",7,79.43,10.69,-0.15,0.03,2.93,1.07,0,"1 nonsynonymous","S43Y",1
"lib2","SARS-CoV-2","AAAAAATGATATTACA",4,72.41,10.67,-0.16,0.06,2.98,1.01,0,">1 nonsynonymous","L5R N40G T55I",3
"lib2","SARS-CoV-2","AAAAAATGATCCGGCT",8,4.33,NA,NA,NA,NA,NA,NA,"stop","G9S A14* L95S N120T Y178V",5
"lib2","SARS-CoV-2","AAAAAATGATTACAAG",3,41.1,10.73,-0.11,0.08,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAATGGGTCCTAA",1,84.47,10.8,-0.04,0.06,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAAATGGTCCACAG",3,0.35,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib2","SARS-CoV-2","AAAAAATGGTTACACT",2,7.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S19R P96R",2
"lib2","SARS-CoV-2","AAAAAATGTACATGAC",9,49.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40C G86K I104L N130L V173S",5
"lib2","SARS-CoV-2","AAAAAATGTGACTTCG",11,160.72,10.73,-0.11,0.03,2.95,1.05,0,">1 nonsynonymous","V37M R78G L111M K132L T148N S164R",6
"lib2","SARS-CoV-2","AAAAAATGTGTGCTAG",8,83.49,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y39L I138L V181P",3
"lib2","SARS-CoV-2","AAAAAATTACGGATAA",4,84.88,10.61,-0.22,0.04,2.92,1.06,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AAAAAATTATTTCGAA",6,8.72,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A22T A33N D59M P96A I104P",5
"lib2","SARS-CoV-2","AAAAAATTCTTACTAC",11,148.86,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S43Y S108L G174W L188V",4
"lib2","SARS-CoV-2","AAAAAATTCTTTACAA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","P82* L95P T140N Q176Y S200F",5
"lib2","SARS-CoV-2","AAAAAATTGACCCTGA",5,51.42,10.74,-0.1,0.04,2.95,1.01,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","AAAAAATTTAGCAAAA",4,81.3,9.78,-1.05,0.06,2.13,1.04,0,">1 nonsynonymous","K26A L57R",2
"lib2","SARS-CoV-2","AAAAAATTTGCGCTTG",1,18.55,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V52D A89L N107S G116I",4
"lib2","SARS-CoV-2","AAAAACAAAAAATTGT",1,14.39,10.58,-0.26,0.12,2.75,1.24,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAAACAAAAACCGTA",17,86.57,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y35P I88R S129E P197L",4
"lib2","SARS-CoV-2","AAAAACAAAACTAAGT",14,290.37,10.84,0.01,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAACAAAGTAAATG",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T V77S F99T G196C S200T",5
"lib2","SARS-CoV-2","AAAAACAAAGTCAACG",5,130.36,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","R124M Y178S",2
"lib2","SARS-CoV-2","AAAAACAAAGTGCAGT",1,35.43,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","I2H F8L K26E F44I L95C T100S K199L",7
"lib2","SARS-CoV-2","AAAAACAAATATTAAA",10,47.3,6.16,-4.68,0.91,1.5,1.09,0.03,">1 nonsynonymous","W23K A89L",2
"lib2","SARS-CoV-2","AAAAACAAATGGGGAC",3,111.19,10.3,-0.54,0.03,2.85,1.03,0,">1 nonsynonymous","N13H L60T",2
"lib2","SARS-CoV-2","AAAAACAACGATAAAC",5,144.22,10.72,-0.12,0.06,2.92,1.05,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","AAAAACAACTACGTAC",4,23.93,6.66,-4.17,0.37,1.5,1.17,0.02,">1 nonsynonymous","N13G A42R C158S",3
"lib2","SARS-CoV-2","AAAAACAAGAAATAAA",3,15.82,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L95H T201G",2
"lib2","SARS-CoV-2","AAAAACAAGGAACGAG",23,6.85,NA,NA,NA,NA,NA,NA,"stop","Y35K N64* A105T",3
"lib2","SARS-CoV-2","AAAAACAAGTTAGGGA",9,107.03,10.87,0.03,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAACAATGTACAAA",4,76.7,6.12,-4.72,1.07,1.5,1.2,0.03,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","AAAAACACCATGATTT",6,0.03,NA,NA,NA,NA,NA,NA,"stop","G9* Y50A L60M G74H Y175I",5
"lib2","SARS-CoV-2","AAAAACACCTAAAGCT",2,144.37,9.11,-1.73,0.06,2.52,1.1,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","AAAAACACGACACCCA",3,19.1,10.75,-0.09,0.06,2.94,1.11,0,">1 nonsynonymous","F8W Y178F",2
"lib2","SARS-CoV-2","AAAAACACGCAATCTT",10,86.43,7.49,-3.34,0.23,1.5,1.07,0.02,">1 nonsynonymous","F134L G146M S184R",3
"lib2","SARS-CoV-2","AAAAACACGTAAGAAA",9,1.37,NA,NA,NA,NA,NA,NA,"stop","D90V T100* S129R D137S",4
"lib2","SARS-CoV-2","AAAAACACTACAGTCG",8,46.28,9.7,-1.14,0.05,2,1.01,0,">1 nonsynonymous","K94V E141T",2
"lib2","SARS-CoV-2","AAAAACACTTTAAAAA",6,64.99,10.79,-0.04,0.05,2.97,1.05,0,">1 nonsynonymous","T63K G196S",2
"lib2","SARS-CoV-2","AAAAACAGAAGCGGTG",4,129.92,10.68,-0.15,0.04,2.97,1.05,0,">1 nonsynonymous","S45T N64P",2
"lib2","SARS-CoV-2","AAAAACAGAGATATGT",1,25.2,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L57K Y66H S164I",3
"lib2","SARS-CoV-2","AAAAACAGATACAATC",1,0.27,NA,NA,NA,NA,NA,NA,"stop","V20R P54*",2
"lib2","SARS-CoV-2","AAAAACAGCCTCTTAC",7,75.49,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G146L C150W",2
"lib2","SARS-CoV-2","AAAAACAGCGAAAAAG",10,115.77,10.84,0,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAACAGCTAACAAA",2,12.49,10.4,-0.43,0.12,2.65,1,0.01,"1 nonsynonymous","S69Q",1
"lib2","SARS-CoV-2","AAAAACAGGCTGAACA",2,13.84,10.86,0.03,0.09,2.88,1.12,0,"1 nonsynonymous","L5A",1
"lib2","SARS-CoV-2","AAAAACAGTAAACCCT",7,44.05,7.58,-3.26,0.12,2.02,1.08,0.01,">1 nonsynonymous","C6K T63D V71I T170M",4
"lib2","SARS-CoV-2","AAAAACAGTACAACAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","N1C G9R S36* K87T",4
"lib2","SARS-CoV-2","AAAAACAGTCATTTTG",4,74.88,8.96,-1.88,0.05,2.94,1.04,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","AAAAACAGTGCCAATT",6,1395.26,10.44,-0.39,0.03,2.93,1.01,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","AAAAACAGTTGAAGTA",8,66.48,9.34,-1.49,0.04,2.93,1.07,0,">1 nonsynonymous","Y119S P149Q",2
"lib2","SARS-CoV-2","AAAAACATAAAACATA",16,240.77,10.71,-0.13,0.02,2.96,1.06,0,">1 nonsynonymous","T55G R78H",2
"lib2","SARS-CoV-2","AAAAACATAAAAGCTA",1,38.61,10.11,-0.73,0.06,2.93,1.02,0,">1 nonsynonymous","N58L K87C",2
"lib2","SARS-CoV-2","AAAAACATAGACCATC",1,24.82,10.72,-0.12,0.05,2.93,1.1,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","AAAAACATGGTATAAA",2,32.3,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5W E10D A105Y Y121P N157D",5
"lib2","SARS-CoV-2","AAAAACATTAAGAATC",10,68.78,7.97,-2.87,0.16,1.5,1.14,0.01,">1 nonsynonymous","T85A P161M",2
"lib2","SARS-CoV-2","AAAAACATTACAAATT",5,73.7,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I28L F44T L131G T201M",4
"lib2","SARS-CoV-2","AAAAACATTATCGACA",19,326.5,10.2,-0.64,0.04,2.82,1.03,0,">1 nonsynonymous","P7V N40S S200R",3
"lib2","SARS-CoV-2","AAAAACATTCACATGT",4,164.38,10.74,-0.09,0.07,2.78,1.14,0,">1 nonsynonymous","Y35T Q163V",2
"lib2","SARS-CoV-2","AAAAACATTCTCCCGT",4,35.16,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V11Q C49N E76A G116S",4
"lib2","SARS-CoV-2","AAAAACATTGTTTCAT",10,137.84,6,-4.84,1.95,1.5,1.16,0.01,">1 nonsynonymous","G9K I28V A89M T170K",4
"lib2","SARS-CoV-2","AAAAACATTTTACACC",14,103.6,10.06,-0.78,0.08,2.68,1.04,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AAAAACCAAATCATTA",5,46.05,6,-4.84,2,3,1.05,0,"1 nonsynonymous","F167Q",1
"lib2","SARS-CoV-2","AAAAACCAAATCTTTT",17,130.97,6,-4.84,0.97,1.5,1.18,0,">1 nonsynonymous","Y35M D68G",2
"lib2","SARS-CoV-2","AAAAACCAATATCAAT",3,101.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G172Q A192E",2
"lib2","SARS-CoV-2","AAAAACCAATCGTTGT",1,75.63,10.53,-0.3,0.04,3,1.01,0,">1 nonsynonymous","E135T P197E",2
"lib2","SARS-CoV-2","AAAAACCAATTAGAGC",5,27.65,6,-4.84,0.33,2.23,1.05,0,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","AAAAACCACAACTGCA",9,79.04,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N118V Y165E",2
"lib2","SARS-CoV-2","AAAAACCACACCAGCT",2,65.1,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G101A F160G Y175E",3
"lib2","SARS-CoV-2","AAAAACCAGAGACAGC",7,65.67,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V32K F62D T100L G146L",4
"lib2","SARS-CoV-2","AAAAACCAGCTAAGAA",2,34.55,8.16,-2.68,0.12,2.6,1.08,0.01,">1 nonsynonymous","C31P G146E T201R",3
"lib2","SARS-CoV-2","AAAAACCAGGGTTTCC",7,115.59,10.78,-0.05,0.06,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAACCATAGAGAAA",4,35.31,8.74,-2.1,0.09,1.93,1.01,0,">1 nonsynonymous","A22S L122D E135C",3
"lib2","SARS-CoV-2","AAAAACCATTAGTCCA",1,30.58,10.88,0.05,0.07,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAACCATTGTGATT",4,85.61,10.86,0.03,0.07,2.9,1.11,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","AAAAACCCAGAATCAA",1,10.69,9.82,-1.02,0.15,2.17,1.12,0.01,">1 nonsynonymous","N4S L60A Y91C",3
"lib2","SARS-CoV-2","AAAAACCCATCTGACA",5,18.37,7.26,-3.57,0.64,1.5,1.05,0.05,">1 nonsynonymous","T15Y R127L T201Q",3
"lib2","SARS-CoV-2","AAAAACCCCTATTTGC",12,283.04,9.24,-1.6,0.03,2.91,1.08,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","AAAAACCCCTGTTAAA",3,95.85,9.89,-0.94,0.06,2.61,1.06,0,"1 nonsynonymous","S19M",1
"lib2","SARS-CoV-2","AAAAACCCGGCTTAAA",9,46.87,9.41,-1.43,0.13,2.25,1.1,0.01,">1 nonsynonymous","A42S T55N P82L K87T",4
"lib2","SARS-CoV-2","AAAAACCGATCCGATT",1,138.15,8.54,-2.29,0.08,1.95,1.08,0,">1 nonsynonymous","I142M Q176R K198T",3
"lib2","SARS-CoV-2","AAAAACCGCACAAGCC",1,31.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V32W F126S G166E",3
"lib2","SARS-CoV-2","AAAAACCGCCCCTATT",1,32.07,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","F44I R127Y G146R T170S",4
"lib2","SARS-CoV-2","AAAAACCGGAGGACAA",6,66.66,8.36,-2.48,0.13,2.03,1.09,0.01,">1 nonsynonymous","Y123A G146E",2
"lib2","SARS-CoV-2","AAAAACCGGTATAAAT",4,15.16,NA,NA,NA,NA,NA,NA,"stop","A14* L57G L122P",3
"lib2","SARS-CoV-2","AAAAACCGTTCGCTCT",6,25.68,9.26,-1.58,0.11,1.92,1.06,0.01,">1 nonsynonymous","F44T P149Q E186F",3
"lib2","SARS-CoV-2","AAAAACCTAGTAGAAC",5,59.5,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9P R127E Q144T N171G",4
"lib2","SARS-CoV-2","AAAAACCTGACTACCA",21,181.27,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20L C158L Q168L",3
"lib2","SARS-CoV-2","AAAAACCTTGTATGAC",5,81.64,10.13,-0.71,0.05,2.68,1.01,0,">1 nonsynonymous","S45I T201Y",2
"lib2","SARS-CoV-2","AAAAACGAAAATCTAG",10,61.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V S19R L131E I142T",4
"lib2","SARS-CoV-2","AAAAACGAAACAAGTC",1,2.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E154F",1
"lib2","SARS-CoV-2","AAAAACGAAACTCCCC",3,19.55,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","AAAAACGAGAAGTAAT",12,2.64,NA,NA,NA,NA,NA,NA,"stop","N64M Y175*",2
"lib2","SARS-CoV-2","AAAAACGATAAGAATC",3,20.41,9.48,-1.36,0.1,2.92,1.09,0,">1 nonsynonymous","T100I L125N",2
"lib2","SARS-CoV-2","AAAAACGCATAGGGTA",3,19.24,6.85,-3.98,0.3,1.67,1.15,0.02,">1 nonsynonymous","C6T W106L P149F G166W",4
"lib2","SARS-CoV-2","AAAAACGCATATACAC",2,26.11,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","P82S A89L N120M S139Q F167Y",5
"lib2","SARS-CoV-2","AAAAACGCTAACTATC",2,18.28,8.78,-2.06,0.23,2.12,1.19,0.01,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","AAAAACGCTACAAGAA",6,148.65,10.18,-0.65,0.03,2.96,1.05,0,">1 nonsynonymous","A89S E154D",2
"lib2","SARS-CoV-2","AAAAACGCTACCTGTT",2,70.34,10.76,-0.08,0.06,2.94,1.1,0,">1 nonsynonymous","R27K G83M",2
"lib2","SARS-CoV-2","AAAAACGGTAAAATAT",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V T85R",2
"lib2","SARS-CoV-2","AAAAACGGTCTATTCG",3,15.77,9.29,-1.54,0.26,1.52,1.13,0.03,"1 nonsynonymous","W23L",1
"lib2","SARS-CoV-2","AAAAACGTAGAAGAAA",3,69.34,10.36,-0.47,0.03,2.84,1.16,0,">1 nonsynonymous","N40T K87L",2
"lib2","SARS-CoV-2","AAAAACGTATTCTTCA",10,65.07,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y50R D59L R179F",3
"lib2","SARS-CoV-2","AAAAACGTCTAATCCT",4,113.85,8.04,-2.8,0.15,1.77,1.07,0.01,">1 nonsynonymous","I138V Y165E",2
"lib2","SARS-CoV-2","AAAAACGTTATACTAA",12,211.25,8.03,-2.81,0.1,1.5,1.1,0,">1 nonsynonymous","I72L D98F G117K",3
"lib2","SARS-CoV-2","AAAAACTACTCGACTA",13,1.7,NA,NA,NA,NA,NA,NA,"stop","C31* D59V P96I",3
"lib2","SARS-CoV-2","AAAAACTATAGGTATT",4,51.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15S W23S D59M Y91C",4
"lib2","SARS-CoV-2","AAAAACTATATAATGT",4,48.58,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A14I Q176G F185C",3
"lib2","SARS-CoV-2","AAAAACTCTACAATAG",6,18.15,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S43D I104R L122P E186S",4
"lib2","SARS-CoV-2","AAAAACTGAAACCGAT",4,0.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150K",1
"lib2","SARS-CoV-2","AAAAACTGAAATCAAG",2,65.77,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L57V F167N",2
"lib2","SARS-CoV-2","AAAAACTGACTCTTAA",6,86.26,10.28,-0.56,0.04,2.83,1.09,0,">1 nonsynonymous","F8I T85Q I142M P149D",4
"lib2","SARS-CoV-2","AAAAACTGGTTTTGAA",5,6.26,9.17,-1.66,0.16,1.5,1.05,0.02,">1 nonsynonymous","T3F E10G G51L S129V",4
"lib2","SARS-CoV-2","AAAAACTTAATACAGT",2,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E G83Y F99T T201R",4
"lib2","SARS-CoV-2","AAAAACTTATCGTATC",8,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H E76M C102V",3
"lib2","SARS-CoV-2","AAAAACTTATTATCCT",1,24.99,10.76,-0.08,0.07,2.97,1.05,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","AAAAACTTCAGACTAA",6,43.62,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G117S K132F Y143R",3
"lib2","SARS-CoV-2","AAAAACTTCCCTTAGT",1,5.71,6,-4.84,1.49,1.5,1.23,0.04,">1 nonsynonymous","S45F L162R",2
"lib2","SARS-CoV-2","AAAAACTTCGTACACT",2,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39C A89C I138Y",3
"lib2","SARS-CoV-2","AAAAACTTGTACGATA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","L95* I104A",2
"lib2","SARS-CoV-2","AAAAACTTGTGAAAAT",6,46.18,6.15,-4.69,0.59,1.5,1.14,0.01,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","AAAAACTTTCGAAAGG",3,49.05,10.44,-0.39,0.04,2.87,1.09,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","AAAAACTTTGTCCTAC",8,90.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10L R127N C158F Y175F",4
"lib2","SARS-CoV-2","AAAAACTTTTTCAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62S W106S G155Q",3
"lib2","SARS-CoV-2","AAAAAGAAAAATCAAT",4,2.54,NA,NA,NA,NA,NA,NA,"stop","F62E T100F N107* P149L",4
"lib2","SARS-CoV-2","AAAAAGAAAACCGTAA",9,0.86,NA,NA,NA,NA,NA,NA,"stop","D34Y Q79* I88L F167P V173E T201S",6
"lib2","SARS-CoV-2","AAAAAGAAAACTTTAA",6,39.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S139F C158T",2
"lib2","SARS-CoV-2","AAAAAGAAAAGGGGCC",5,30.5,8.21,-2.62,0.28,1.65,1.16,0.03,">1 nonsynonymous","S53Y D98L N118H A192F",4
"lib2","SARS-CoV-2","AAAAAGAAAATGGACA",4,64.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68A P161S",2
"lib2","SARS-CoV-2","AAAAAGAAAGCGTTTA",10,246.54,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","L60A F99V P169T",3
"lib2","SARS-CoV-2","AAAAAGAAATCAAGGC",1,12.07,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","Y159S",1
"lib2","SARS-CoV-2","AAAAAGAACCTCAAAG",1,23.48,10.54,-0.3,0.12,2.62,1.02,0.01,">1 nonsynonymous","E10M K198M",2
"lib2","SARS-CoV-2","AAAAAGAACGACTCAG",3,15.08,6.3,-4.54,1.03,1.5,1.23,0.04,">1 nonsynonymous","N40S Y50L N130I",3
"lib2","SARS-CoV-2","AAAAAGAACTACCTGC",1,14.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S36K V181S",2
"lib2","SARS-CoV-2","AAAAAGAACTTCATAT",7,20.03,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V11F S147C Y165A",3
"lib2","SARS-CoV-2","AAAAAGAAGGAAAACT",2,42.92,10.45,-0.39,0.04,3,1.01,0,"1 nonsynonymous","A14M",1
"lib2","SARS-CoV-2","AAAAAGAAGGGCGTGG",9,152.2,6.31,-4.52,0.3,1.5,1.13,0.01,">1 nonsynonymous","V37S N118F R127H S147T F160S",5
"lib2","SARS-CoV-2","AAAAAGAATAGGGAAA",5,98.87,8.45,-2.39,0.08,2.33,1.06,0,">1 nonsynonymous","N64S Q176V",2
"lib2","SARS-CoV-2","AAAAAGAATCATCTAA",6,53.35,6.24,-4.6,0.88,1.5,1.21,0.03,">1 nonsynonymous","G9T D97V Y121D",3
"lib2","SARS-CoV-2","AAAAAGACAGCTAGCT",7,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H Y91T D97N V103E L183Q",5
"lib2","SARS-CoV-2","AAAAAGACCCAATGCG",14,271.37,10.19,-0.65,0.02,2.75,1.04,0,">1 nonsynonymous","D90L R136Q",2
"lib2","SARS-CoV-2","AAAAAGACCCCATAAT",7,69.5,10.46,-0.37,0.05,2.99,1,0,">1 nonsynonymous","E135M V153E",2
"lib2","SARS-CoV-2","AAAAAGACTATCATGA",9,71.9,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N1M G86L P133D G146T N157P T201P",6
"lib2","SARS-CoV-2","AAAAAGACTGTGCCAT",6,31.11,8.41,-2.43,0.33,1.5,1,0.05,">1 nonsynonymous","V20P C49Y T85S",3
"lib2","SARS-CoV-2","AAAAAGACTTAAAAAT",2,22.6,7.93,-2.9,0.33,1.5,1.1,0.04,">1 nonsynonymous","Y119K F126E",2
"lib2","SARS-CoV-2","AAAAAGAGAGAAAATA",3,110.36,10.01,-0.82,0.06,2.55,1.04,0,">1 nonsynonymous","T63G A81C S129V",3
"lib2","SARS-CoV-2","AAAAAGAGAGTCCGAG",1,0.06,NA,NA,NA,NA,NA,NA,"stop","V11* K26L T55S I88L F156W",5
"lib2","SARS-CoV-2","AAAAAGAGATAAAACT",3,331.83,10.09,-0.74,0.03,2.95,1.03,0,">1 nonsynonymous","A42E T85V G174T",3
"lib2","SARS-CoV-2","AAAAAGAGGAAAGATG",2,10.93,8.13,-2.71,0.21,2.04,1.05,0.03,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","AAAAAGAGTCCAATAA",11,117.97,10.8,-0.03,0.05,2.93,1.09,0,"1 nonsynonymous","T140E",1
"lib2","SARS-CoV-2","AAAAAGATAAAATTCA",14,217.79,10.19,-0.64,0.04,2.85,1.03,0,">1 nonsynonymous","L5W R78I D90T",3
"lib2","SARS-CoV-2","AAAAAGATAAACATTT",2,32.5,10.41,-0.43,0.04,3,1,0,">1 nonsynonymous","V37A L60Q D98F",3
"lib2","SARS-CoV-2","AAAAAGATAACAAGCT",1,6.39,9.05,-1.79,0.4,1.99,1,0.05,">1 nonsynonymous","R16Y C49I",2
"lib2","SARS-CoV-2","AAAAAGATAACAGTAA",10,297.66,10.54,-0.3,0.03,2.91,1.04,0,">1 nonsynonymous","L5K N110H S129K V180M S184V T201M",6
"lib2","SARS-CoV-2","AAAAAGATACTGACAG",3,21.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C31F K48A I104R",3
"lib2","SARS-CoV-2","AAAAAGATCAACTTAT",3,47.39,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S36R F70V V77C T148V C150M N157C V173E",7
"lib2","SARS-CoV-2","AAAAAGATGTTAGAGT",4,151.37,10.68,-0.15,0.03,2.94,1.06,0,">1 nonsynonymous","T63Y E154A",2
"lib2","SARS-CoV-2","AAAAAGATGTTGAACT",5,31.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14S N107K Y165W",3
"lib2","SARS-CoV-2","AAAAAGATTAAAGTTG",7,88.49,8.98,-1.85,0.1,1.51,1.1,0,">1 nonsynonymous","V37F F99S",2
"lib2","SARS-CoV-2","AAAAAGATTACCATAA",1,14.13,8.38,-2.46,0.32,1.57,1.13,0.03,">1 nonsynonymous","C6D R25T",2
"lib2","SARS-CoV-2","AAAAAGATTAGTCGTT",13,0.23,NA,NA,NA,NA,NA,NA,"stop","L5G V11S G86F W106* N120R Y143M Y175V",7
"lib2","SARS-CoV-2","AAAAAGATTATTTCAA",26,409.3,10.64,-0.2,0.02,2.93,1.06,0,">1 nonsynonymous","T15S T55L I138R K198M",4
"lib2","SARS-CoV-2","AAAAAGATTGGAAAAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","N1* G86L W106E S139*",4
"lib2","SARS-CoV-2","AAAAAGATTGTCCTTC",3,23.48,10.47,-0.36,0.07,2.93,1,0,">1 nonsynonymous","F17Y K56M",2
"lib2","SARS-CoV-2","AAAAAGCAAACTTTTT",3,89.71,9.51,-1.33,0.07,2.28,1.02,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","AAAAAGCAAATCATCG",4,41.14,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G101R V115K",2
"lib2","SARS-CoV-2","AAAAAGCAAATTAAAG",1,19.55,9.31,-1.53,0.11,2.32,1.21,0.01,">1 nonsynonymous","L57F G152P",2
"lib2","SARS-CoV-2","AAAAAGCAATAACACT",2,0,NA,NA,NA,NA,NA,NA,"stop","N130R C150*",2
"lib2","SARS-CoV-2","AAAAAGCACGCTCCTA",7,137.1,6.49,-4.35,0.3,1.5,1.15,0.01,">1 nonsynonymous","T63R C150K",2
"lib2","SARS-CoV-2","AAAAAGCAGGTATATA",3,131.88,9.39,-1.45,0.06,2.03,1.07,0,">1 nonsynonymous","G9A N40S Q144R Y178S",4
"lib2","SARS-CoV-2","AAAAAGCATAGACCAT",2,25.36,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F8A Y91V N107T",3
"lib2","SARS-CoV-2","AAAAAGCATCAAACAT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","A42N R73S D90* P149S",4
"lib2","SARS-CoV-2","AAAAAGCATTTTTAAA",6,85.48,10.73,-0.11,0.06,2.93,1.08,0,"1 nonsynonymous","P7H",1
"lib2","SARS-CoV-2","AAAAAGCCAAGGCAGT",2,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L G146T T170C G174I",4
"lib2","SARS-CoV-2","AAAAAGCCACAATGCT",3,26.26,9.99,-0.84,0.06,2.84,1.14,0,"1 nonsynonymous","C31H",1
"lib2","SARS-CoV-2","AAAAAGCCACGCCCAT",11,6.26,NA,NA,NA,NA,NA,NA,"stop","D90C C102S N120* Q176S",4
"lib2","SARS-CoV-2","AAAAAGCCATATCATT",5,12.85,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","L5I K56G D90T D98N V103W T170V",6
"lib2","SARS-CoV-2","AAAAAGCGACGCTTAG",2,62.99,10.19,-0.65,0.05,2.77,1.06,0,">1 nonsynonymous","Y91V S200I",2
"lib2","SARS-CoV-2","AAAAAGCGCGAATGCT",6,0.05,NA,NA,NA,NA,NA,NA,"stop","F47* A81K E186H",3
"lib2","SARS-CoV-2","AAAAAGCGGACGCTTT",2,33.29,9.11,-1.73,0.13,1.92,1.09,0.01,">1 nonsynonymous","A42V K56L T85K C102I Y123K K132T",6
"lib2","SARS-CoV-2","AAAAAGCGGCCCACAA",3,34.27,6.08,-4.76,0.72,3,1.17,0.01,">1 nonsynonymous","K87Y D90E C102V P149T E154K G196L",6
"lib2","SARS-CoV-2","AAAAAGCTACTAGAGT",14,52.86,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V52K N58I A81T F99I V103D",5
"lib2","SARS-CoV-2","AAAAAGCTATTGAACT",7,10.07,9.43,-1.4,0.18,2.06,1.21,0.02,">1 nonsynonymous","T3H N64V W106M P133A",4
"lib2","SARS-CoV-2","AAAAAGCTCTTCTCCC",11,38.47,NA,NA,NA,NA,NA,NA,"stop","W23* V103F Y119N Q144*",4
"lib2","SARS-CoV-2","AAAAAGCTTATAGATG",8,27.91,8.08,-2.75,0.25,1.53,1.21,0.02,">1 nonsynonymous","E10L T55Q G86S V153M",4
"lib2","SARS-CoV-2","AAAAAGGAACTAATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3N W23G N107L N118L F126T Q168*",6
"lib2","SARS-CoV-2","AAAAAGGAGGCCAAGA",4,43.47,10.15,-0.68,0.05,2.84,1.11,0,">1 nonsynonymous","C6S T63N",2
"lib2","SARS-CoV-2","AAAAAGGATAGTAGAT",5,94.66,10.24,-0.6,0.03,2.86,1.04,0,">1 nonsynonymous","S36L I104M K132N",3
"lib2","SARS-CoV-2","AAAAAGGATCAAAAAA",1,14.63,9.94,-0.89,0.12,2.07,1.1,0.01,"1 nonsynonymous","S69L",1
"lib2","SARS-CoV-2","AAAAAGGATGTAGTTA",4,20.44,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T15I G74P",2
"lib2","SARS-CoV-2","AAAAAGGATTACTAAT",4,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71Y K87Y L95K E154Y P177S",5
"lib2","SARS-CoV-2","AAAAAGGCAATGAGGG",20,149.38,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K26R F99A S139N",3
"lib2","SARS-CoV-2","AAAAAGGCAATTAATT",2,0.62,NA,NA,NA,NA,NA,NA,"stop","N58C Y91N P96A L131* T170L Y175I",6
"lib2","SARS-CoV-2","AAAAAGGCACAAATAA",14,9.47,NA,NA,NA,NA,NA,NA,"stop","N13Y D68*",2
"lib2","SARS-CoV-2","AAAAAGGCAGACGTTC",1,1.03,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAGGGAACATAGG",6,85.41,9.54,-1.29,0.05,2.07,1.04,0,">1 nonsynonymous","I2Y A14L D90L K198A",4
"lib2","SARS-CoV-2","AAAAAGGGCACGTAAT",5,212.96,10.58,-0.25,0.03,2.94,1.07,0,">1 nonsynonymous","N130T G155S",2
"lib2","SARS-CoV-2","AAAAAGGGTGTTGTAG",1,53.66,9.97,-0.87,0.05,2.93,1.05,0,">1 nonsynonymous","K56Q Y119K",2
"lib2","SARS-CoV-2","AAAAAGGTGGGTGGCA",3,95.55,10.8,-0.04,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAAGGTTAAATATA",1,10.28,10.32,-0.52,0.12,2.91,1.09,0.01,">1 nonsynonymous","K56I E141I",2
"lib2","SARS-CoV-2","AAAAAGTAAAATGTAG",3,33.72,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A22R S129I P161Y",3
"lib2","SARS-CoV-2","AAAAAGTAAACGTGAG",2,34.41,10.49,-0.35,0.05,2.9,1.06,0,"1 nonsynonymous","Y35G",1
"lib2","SARS-CoV-2","AAAAAGTAAGCAAAAG",6,43.84,8.34,-2.5,0.15,1.74,1.12,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","AAAAAGTAATAACGAT",4,35.05,8.71,-2.13,0.08,1.68,1.05,0,">1 nonsynonymous","K26M S53C L60G T100A S139N",5
"lib2","SARS-CoV-2","AAAAAGTACACCGATC",5,45.72,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10P G51R L60S I88F T100H S139L Y159G",7
"lib2","SARS-CoV-2","AAAAAGTACTCTCGCA",5,78.87,10.69,-0.15,0.03,2.88,1.06,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","AAAAAGTAGTATATAC",3,22.84,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","N24S Q84K N92W",3
"lib2","SARS-CoV-2","AAAAAGTAGTCACCCA",7,62.24,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","C49R C158N F167Y",3
"lib2","SARS-CoV-2","AAAAAGTATAAATTTA",12,42.23,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S53R G74T Y93F Y123T Y175W",5
"lib2","SARS-CoV-2","AAAAAGTATTGGCGAA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","T3* N64D R78H G152*",4
"lib2","SARS-CoV-2","AAAAAGTCAAGATATT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146I",1
"lib2","SARS-CoV-2","AAAAAGTCATAATGCA",4,125.93,10.16,-0.68,0.03,2.93,1.04,0,">1 nonsynonymous","L38M I72V K87F K114D",4
"lib2","SARS-CoV-2","AAAAAGTCATGCAACA",7,24.27,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L60S Y66I P82S K114M G172R",5
"lib2","SARS-CoV-2","AAAAAGTCCACGTGAC",2,17.11,9.8,-1.04,0.13,2.03,1.06,0.01,">1 nonsynonymous","T3E F12T K198S",3
"lib2","SARS-CoV-2","AAAAAGTCGGGATTAC",10,158.16,8.15,-2.68,0.11,1.93,1.08,0,">1 nonsynonymous","C6L Y143W V173Y",3
"lib2","SARS-CoV-2","AAAAAGTCTACATTAA",1,7.91,10.4,-0.44,0.07,2.96,1.08,0,">1 nonsynonymous","D97R G152S T201G",3
"lib2","SARS-CoV-2","AAAAAGTCTATTACCT",1,4.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","AAAAAGTGAATTAAAG",6,76.64,9.96,-0.87,0.08,2.35,1.03,0,">1 nonsynonymous","C102F P197S",2
"lib2","SARS-CoV-2","AAAAAGTGTATACTGT",17,339.96,10.69,-0.14,0.02,2.96,1.05,0,"1 nonsynonymous","T63M",1
"lib2","SARS-CoV-2","AAAAAGTGTGAAGGGC",11,79.29,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F17R L57R D137H T148L T201E",5
"lib2","SARS-CoV-2","AAAAAGTTGCTCCCAA",2,18.12,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S45R F99E V115G",3
"lib2","SARS-CoV-2","AAAAAGTTTGGGAACT",5,24.2,10.75,-0.09,0.09,2.72,1.3,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATAAAAACAATG",5,124.94,10.52,-0.32,0.03,2.89,1.09,0,"1 nonsynonymous","I104A",1
"lib2","SARS-CoV-2","AAAAATAAAACGCAAG",2,34.09,10.52,-0.32,0.08,2.96,1,0,"1 nonsynonymous","F62N",1
"lib2","SARS-CoV-2","AAAAATAAAAGACTAG",9,93.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D59I L95T",2
"lib2","SARS-CoV-2","AAAAATAAAAGTCTCC",1,8.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N F185V",2
"lib2","SARS-CoV-2","AAAAATAAACCTCTGT",3,0,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","AAAAATAAAGTACAAC",5,106.78,10.84,0.01,0.07,2.91,1.09,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","AAAAATAAATATGTGG",3,32.36,9.1,-1.73,0.15,1.72,1.05,0.01,">1 nonsynonymous","N24P Y66F N110M I142L",4
"lib2","SARS-CoV-2","AAAAATAACAACATCG",5,170.52,10.84,0,0.05,2.91,1.09,0,">1 nonsynonymous","V37E T46M",2
"lib2","SARS-CoV-2","AAAAATAACAAGGGAT",5,251.63,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I88M Y175R",2
"lib2","SARS-CoV-2","AAAAATAACAATATGC",5,0.44,NA,NA,NA,NA,NA,NA,"stop","I2N R27L S41L D59V P96S D97L N107Y N120* F156D",9
"lib2","SARS-CoV-2","AAAAATAACAATGGAC",2,16.46,10.24,-0.59,0.16,2.76,1.1,0.01,">1 nonsynonymous","G51D D98T L122S",3
"lib2","SARS-CoV-2","AAAAATAACATCTTTA",2,16.81,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V77T K94T P149F",3
"lib2","SARS-CoV-2","AAAAATAACATGACTT",13,2.26,NA,NA,NA,NA,NA,NA,"stop","A18V Y50* N118I R136K G152K",5
"lib2","SARS-CoV-2","AAAAATAACCCGCAGG",4,1.97,NA,NA,NA,NA,NA,NA,"stop","Y39T G117*",2
"lib2","SARS-CoV-2","AAAAATAAGCGTGTAT",12,23.16,8.77,-2.07,0.16,1.8,1.1,0.02,"1 nonsynonymous","P96W",1
"lib2","SARS-CoV-2","AAAAATAAGCTGATTT",14,88.96,8.36,-2.47,0.25,1.5,1,0.03,">1 nonsynonymous","P82S A145V",2
"lib2","SARS-CoV-2","AAAAATAAGCTTAAAG",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H Q176F F185Q K198N",4
"lib2","SARS-CoV-2","AAAAATAAGGAATGTT",3,14.22,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C61L D98I S113I Y121N F160M V180D",6
"lib2","SARS-CoV-2","AAAAATAAGGACAGAG",6,39.77,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","K48V P82K K87A D98G",4
"lib2","SARS-CoV-2","AAAAATAAGGGACAAA",7,28.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82M Y93L N120W",3
"lib2","SARS-CoV-2","AAAAATAAGTGACCGC",7,1.23,NA,NA,NA,NA,NA,NA,"stop","G9* N130S E141L",3
"lib2","SARS-CoV-2","AAAAATAAGTTCTCCT",15,187.24,9.39,-1.45,0.06,1.89,1.06,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AAAAATAATAACACCA",8,99.08,10.61,-0.22,0.03,2.97,1.02,0,">1 nonsynonymous","Y35L S43I G174S A192R T201C",5
"lib2","SARS-CoV-2","AAAAATAATAAGTACA",1,38.22,9.6,-1.23,0.15,1.87,1.07,0.01,">1 nonsynonymous","L60S A81V T140L",3
"lib2","SARS-CoV-2","AAAAATAATAATAGTA",4,328.8,10.25,-0.59,0.03,2.84,1.04,0,"1 nonsynonymous","L57A",1
"lib2","SARS-CoV-2","AAAAATAATATACAGA",3,151.18,10.9,0.07,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATAATGTTACAC",5,58.13,8.7,-2.14,0.09,2.97,1.12,0,">1 nonsynonymous","K87L G117M",2
"lib2","SARS-CoV-2","AAAAATAATTCAAAAC",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A G117R",2
"lib2","SARS-CoV-2","AAAAATAATTTAAGCA",10,217.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y66Q G86Y Y91S Y121I",4
"lib2","SARS-CoV-2","AAAAATACAAATTCGC",9,212.51,10.87,0.03,0.04,2.9,1.1,0,"1 nonsynonymous","N4R",1
"lib2","SARS-CoV-2","AAAAATACATTAAAAT",4,30.14,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","W23L A67S L131M",3
"lib2","SARS-CoV-2","AAAAATACCCTTACCC",8,1.69,NA,NA,NA,NA,NA,NA,"stop","N24T N30* F44C D68* G155F",5
"lib2","SARS-CoV-2","AAAAATACCTAAAGGT",16,224.04,8.24,-2.6,0.12,1.5,1.11,0.01,"1 nonsynonymous","Y21K",1
"lib2","SARS-CoV-2","AAAAATACCTACCTCC",8,131.15,8.44,-2.4,0.14,1.78,1.09,0.01,">1 nonsynonymous","S29E C61S D112V K199F",4
"lib2","SARS-CoV-2","AAAAATACTAGGTTAA",6,159.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y121V P161S P177L",3
"lib2","SARS-CoV-2","AAAAATACTGAAAATA",8,41.48,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L38W Y50E P82Q T140L",4
"lib2","SARS-CoV-2","AAAAATACTTAGAACA",19,361.53,9.27,-1.57,0.03,2.92,1.11,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","AAAAATAGAAAGCAGC",2,43.7,9.85,-0.99,0.09,2.64,1.18,0,">1 nonsynonymous","R27H N110R N118M",3
"lib2","SARS-CoV-2","AAAAATAGAGGCCATC",6,170.63,10.29,-0.55,0.05,2.88,1.08,0,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","AAAAATAGATAGGAGC",3,102.56,8.7,-2.14,0.05,2.87,1.09,0,">1 nonsynonymous","V32S G146K",2
"lib2","SARS-CoV-2","AAAAATAGCAAAAAAA",1,49.98,9.31,-1.53,0.07,2.96,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","AAAAATAGCACAATCA",9,138.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N64S Y93S",2
"lib2","SARS-CoV-2","AAAAATAGCACATATC",2,6.98,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T15E V20L S45I E154V",4
"lib2","SARS-CoV-2","AAAAATAGCAGATAAT",3,73.47,10.41,-0.43,0.04,2.89,1.11,0,">1 nonsynonymous","G9V R27T T148Y",3
"lib2","SARS-CoV-2","AAAAATAGGTAAAATT",23,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92H Q168L",2
"lib2","SARS-CoV-2","AAAAATAGTATGCTTC",4,86.85,10.26,-0.58,0.05,2.96,1.05,0,">1 nonsynonymous","A105T G174S",2
"lib2","SARS-CoV-2","AAAAATAGTCATATAG",12,130.46,6.04,-4.8,1.32,1.5,1.32,0.03,">1 nonsynonymous","T15S V103K N130M T140M P149C",5
"lib2","SARS-CoV-2","AAAAATATAACAATAT",4,67.7,9.94,-0.9,0.06,2.59,1.06,0,">1 nonsynonymous","N1V A14H V115E",3
"lib2","SARS-CoV-2","AAAAATATAACACAGT",11,265.75,10.7,-0.14,0.03,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATATACAACCAC",11,2.02,NA,NA,NA,NA,NA,NA,"stop","A42S Y66* Q163*",3
"lib2","SARS-CoV-2","AAAAATATGAAAAATA",4,35.59,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","V77P",1
"lib2","SARS-CoV-2","AAAAATATGCCGGACA",4,30.63,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","C49V F62K R136L",3
"lib2","SARS-CoV-2","AAAAATATGGAAGGCC",10,200.62,10.61,-0.22,0.03,2.97,1.03,0,">1 nonsynonymous","L57M K114M",2
"lib2","SARS-CoV-2","AAAAATATGTACGTTT",2,57.81,10.72,-0.12,0.05,2.97,1.02,0,">1 nonsynonymous","Y91L D97L",2
"lib2","SARS-CoV-2","AAAAATATGTGGCAAG",12,84.63,8.41,-2.43,0.12,2.22,1.1,0.01,">1 nonsynonymous","V37R L57I K87D D97L S139G",5
"lib2","SARS-CoV-2","AAAAATATTCCAGACC",2,16.43,7.17,-3.67,0.43,1.5,1.02,0.05,">1 nonsynonymous","N64T C102L R136T",3
"lib2","SARS-CoV-2","AAAAATATTTAAGACC",1,24.16,10.96,0.13,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATATTTTCCATT",4,26.43,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","D34H D59Q G86M A105I",4
"lib2","SARS-CoV-2","AAAAATATTTTCGTCC",7,198.16,8.58,-2.26,0.2,1.5,1,0.02,">1 nonsynonymous","F62Y T140S Y165R",3
"lib2","SARS-CoV-2","AAAAATCAAAGATGAC",2,10.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68G G86H",2
"lib2","SARS-CoV-2","AAAAATCAAATAGGGA",2,61.52,9.55,-1.28,0.06,2.84,1.16,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","AAAAATCAGAGCCCGG",12,178.14,10.84,0,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATCAGCAAGTTA",6,86.83,8.99,-1.85,0.07,2.89,1.04,0,">1 nonsynonymous","N58T Q163Y Q168K",3
"lib2","SARS-CoV-2","AAAAATCAGGTCATGG",4,28.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106D",1
"lib2","SARS-CoV-2","AAAAATCAGTGATAGG",5,32.55,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","D98M V103P G146V Q176S",4
"lib2","SARS-CoV-2","AAAAATCATCAGTTAT",1,15.69,10.9,0.06,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATCATCATACAT",4,0.33,NA,NA,NA,NA,NA,NA,"stop","K48I E141* G152Y K199M",4
"lib2","SARS-CoV-2","AAAAATCATCCAATAG",3,34.88,10.95,0.12,0.06,2.89,1.13,0,"1 nonsynonymous","S36N",1
"lib2","SARS-CoV-2","AAAAATCATTATGAGG",4,40.24,9.14,-1.7,0.07,2.34,1.03,0,">1 nonsynonymous","L5Y D112L",2
"lib2","SARS-CoV-2","AAAAATCATTGCGCAA",7,0,NA,NA,NA,NA,NA,NA,"stop","S45C F62R D68R G86S I142T N157* Q163* T201R",8
"lib2","SARS-CoV-2","AAAAATCCAATAAGGT",2,15.26,10.18,-0.65,0.14,2.26,1.08,0.01,">1 nonsynonymous","Y123F S139N F160R V173S",4
"lib2","SARS-CoV-2","AAAAATCCACATTCTT",8,15.78,7.7,-3.13,0.52,1.56,1.14,0.07,">1 nonsynonymous","T3G V103G D112E F134N",4
"lib2","SARS-CoV-2","AAAAATCCATGAGATA",6,130.29,10.35,-0.48,0.05,2.94,1.01,0,">1 nonsynonymous","S29V A105T",2
"lib2","SARS-CoV-2","AAAAATCCCAGATTCC",4,0.07,NA,NA,NA,NA,NA,NA,"stop","N151*",1
"lib2","SARS-CoV-2","AAAAATCCCATAAGTA",6,42.22,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T15K D68G",2
"lib2","SARS-CoV-2","AAAAATCCGACAGGGG",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22H P96K S184R",3
"lib2","SARS-CoV-2","AAAAATCCGGGATAAT",8,3.09,NA,NA,NA,NA,NA,NA,"stop","Y39G E141* R179M P191R",4
"lib2","SARS-CoV-2","AAAAATCCTGAACAAT",5,39.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61V G86W F134V",3
"lib2","SARS-CoV-2","AAAAATCGAAATAAAT",8,1.37,NA,NA,NA,NA,NA,NA,"stop","F47S L131* P149T",3
"lib2","SARS-CoV-2","AAAAATCGACACATGA",1,73.15,10.82,-0.01,0.05,2.97,1.04,0,"1 nonsynonymous","Y178F",1
"lib2","SARS-CoV-2","AAAAATCGAGATTTAT",6,69.97,10.73,-0.11,0.06,3,1.04,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","AAAAATCGTACACCTG",4,74.81,8.25,-2.59,0.11,1.5,1.16,0,">1 nonsynonymous","K94E K198A",2
"lib2","SARS-CoV-2","AAAAATCGTCCCCTTT",6,65.92,10.8,-0.03,0.03,2.93,1.07,0,">1 nonsynonymous","V37S S41G",2
"lib2","SARS-CoV-2","AAAAATCGTGGCCTTA",8,223.07,8.94,-1.9,0.07,2.42,1.11,0,">1 nonsynonymous","F47S Y175H",2
"lib2","SARS-CoV-2","AAAAATCTACTCCTCC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","A14R A105* E141P E154Q",4
"lib2","SARS-CoV-2","AAAAATCTCCAAAACG",2,46.13,9.55,-1.29,0.07,2.83,1.05,0,">1 nonsynonymous","Y91M E154I",2
"lib2","SARS-CoV-2","AAAAATCTGCAATCTG",3,9.3,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","Q84N N120L A145C Y159V G174Q",5
"lib2","SARS-CoV-2","AAAAATCTGGCCCCAA",2,33.96,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F99G G117Q",2
"lib2","SARS-CoV-2","AAAAATCTGTCAAATA",12,94.3,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V115C P161F",2
"lib2","SARS-CoV-2","AAAAATCTTGATAAAT",1,29.48,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P96K V103C Q176L",3
"lib2","SARS-CoV-2","AAAAATCTTTAACGTT",10,274.38,8.04,-2.8,0.19,1.5,1.07,0.01,">1 nonsynonymous","N40D A89H L122F Y178M",4
"lib2","SARS-CoV-2","AAAAATGAAATATTGA",2,7.03,7.86,-2.97,0.14,2.09,1,0.01,">1 nonsynonymous","V37P S45N K87E Y119V",4
"lib2","SARS-CoV-2","AAAAATGAAATGCGAT",5,56.88,9.83,-1.01,0.1,2.04,1.12,0,">1 nonsynonymous","R27F F167Y",2
"lib2","SARS-CoV-2","AAAAATGAAATTGCCA",7,91.27,10.91,0.07,0.03,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATGAAGCATACT",4,96.99,10.8,-0.03,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATGACAGGGCCC",3,1.49,NA,NA,NA,NA,NA,NA,"stop","Y50L L188*",2
"lib2","SARS-CoV-2","AAAAATGACATATGCA",1,14.37,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y121G E154H P177E",3
"lib2","SARS-CoV-2","AAAAATGACCACAAAC",2,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D P96E Y123K",3
"lib2","SARS-CoV-2","AAAAATGACGATGGAT",1,11.29,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","W106S Q176I",2
"lib2","SARS-CoV-2","AAAAATGAGGATAAAA",6,105.82,8.07,-2.77,0.12,1.82,1.13,0.01,">1 nonsynonymous","Y165V P169S",2
"lib2","SARS-CoV-2","AAAAATGAGTAGCTTT",3,32.94,10.83,-0.01,0.07,2.94,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATGATCAAGAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib2","SARS-CoV-2","AAAAATGATCATTACA",7,119.22,9.47,-1.37,0.17,1.5,1.06,0.01,"1 nonsynonymous","V77W",1
"lib2","SARS-CoV-2","AAAAATGATTTTTCAT",6,109.09,10.83,-0.01,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATGCACCATCGA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","S45* T85Q",2
"lib2","SARS-CoV-2","AAAAATGCATATTCAA",6,40.52,9.77,-1.07,0.1,2.26,1.06,0,">1 nonsynonymous","D137A P197S",2
"lib2","SARS-CoV-2","AAAAATGCATGTGCGA",5,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L R16P N92C Y119L G146W",5
"lib2","SARS-CoV-2","AAAAATGCCGATTCGT",2,16.16,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1L N107V R136P G146R",4
"lib2","SARS-CoV-2","AAAAATGCTACAGTAG",11,152.57,9.7,-1.13,0.04,2.74,1.08,0,">1 nonsynonymous","L60W K128V E154V",3
"lib2","SARS-CoV-2","AAAAATGCTAGCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","I28Y K48D T85L N92A F156* Q163I",6
"lib2","SARS-CoV-2","AAAAATGCTCAAAATT",9,55.62,10.85,0.02,0.07,2.89,1.09,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","AAAAATGCTGAAAAAA",2,53.65,10.93,0.1,0.08,2.92,1.06,0,"1 nonsynonymous","P54W",1
"lib2","SARS-CoV-2","AAAAATGCTTAATCGC",3,17.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19N I88Y G146T T201S",4
"lib2","SARS-CoV-2","AAAAATGCTTGATAAA",2,32.02,10.74,-0.1,0.08,2.99,1,0,">1 nonsynonymous","Y91F P149M",2
"lib2","SARS-CoV-2","AAAAATGGAATTTTTG",4,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M F167V",2
"lib2","SARS-CoV-2","AAAAATGGACAACATC",3,1.14,NA,NA,NA,NA,NA,NA,"stop","N64* I72L R136*",3
"lib2","SARS-CoV-2","AAAAATGGCCGGAACC",1,21.33,10.81,-0.03,0.06,2.94,1.01,0,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","AAAAATGGCGCCGTTG",3,42.6,10.88,0.05,0.1,2.91,1.05,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","AAAAATGGGAGACAAA",1,22.21,10.27,-0.57,0.07,2.88,1.11,0,">1 nonsynonymous","K48T D90C",2
"lib2","SARS-CoV-2","AAAAATGGGCTGCCCC",2,28.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2F F8Q N24Y A33R S41Q K56L K114V Q163I",8
"lib2","SARS-CoV-2","AAAAATGGTCAGCTAA",1,61.06,10.03,-0.81,0.06,2.88,1.05,0,">1 nonsynonymous","N4C S129C G152A",3
"lib2","SARS-CoV-2","AAAAATGTAAAGTATA",3,24.36,7.14,-3.7,0.32,1.5,1.04,0.02,">1 nonsynonymous","Q84R D112L Y119K",3
"lib2","SARS-CoV-2","AAAAATGTAATAAGGT",9,97.55,10.72,-0.11,0.05,2.96,1.07,0,"1 nonsynonymous","N40H",1
"lib2","SARS-CoV-2","AAAAATGTATTATACG",2,14.55,10.08,-0.76,0.22,2.52,1,0.01,">1 nonsynonymous","T15V N40F",2
"lib2","SARS-CoV-2","AAAAATGTGACAGAGG",2,0.63,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","AAAAATGTTGATAAAT",10,182.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6P A14N Y35T F99S A105N R124M L131W Q168E",8
"lib2","SARS-CoV-2","AAAAATGTTGTACATA",6,81.32,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A105L Y123L D137W Y159L",4
"lib2","SARS-CoV-2","AAAAATTAAAAAGAAA",1,21.65,6,-4.84,2,2.1,1.1,0.01,">1 nonsynonymous","I2V Y91D N107M R124S L131A S139H",6
"lib2","SARS-CoV-2","AAAAATTAAACTTAGG",12,256.34,10.8,-0.04,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATTAAATAAAAA",2,13.03,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F99P F134D T140L",3
"lib2","SARS-CoV-2","AAAAATTAAATTCACA",4,43.08,9.76,-1.08,0.1,2.38,1.03,0,">1 nonsynonymous","C6P S41F I104M V115R",4
"lib2","SARS-CoV-2","AAAAATTACAGATCTA",6,72.76,9.68,-1.15,0.06,2.81,1.09,0,">1 nonsynonymous","A33V T100R T170K",3
"lib2","SARS-CoV-2","AAAAATTACCTAACGC",5,1.26,NA,NA,NA,NA,NA,NA,"stop","L5V L95* N107A K114W S129P",5
"lib2","SARS-CoV-2","AAAAATTACGTTATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L S36R P54M Y66E Y91E K199V",6
"lib2","SARS-CoV-2","AAAAATTACTCTCATG",1,29.18,10.3,-0.54,0.08,2.63,1.04,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","AAAAATTAGACACTGC",2,48.29,10.42,-0.41,0.06,2.86,1.11,0,">1 nonsynonymous","S29I V115F",2
"lib2","SARS-CoV-2","AAAAATTAGACAGTAA",5,95.05,7.59,-3.25,0.16,1.63,1.14,0.01,">1 nonsynonymous","N4Q F17L G166H",3
"lib2","SARS-CoV-2","AAAAATTATCTCTTAA",3,24.15,8.65,-2.19,0.13,1.83,1.05,0.01,">1 nonsynonymous","Y91L N110A Y121R",3
"lib2","SARS-CoV-2","AAAAATTCAATAGTTC",2,128.18,10.01,-0.83,0.03,2.9,1.08,0,">1 nonsynonymous","I2Q P177A",2
"lib2","SARS-CoV-2","AAAAATTCACATTCCC",3,69.64,10.72,-0.12,0.08,2.93,1.09,0,"1 nonsynonymous","T15S",1
"lib2","SARS-CoV-2","AAAAATTCATCTGAAT",9,91.07,8.42,-2.42,0.13,2.1,1.1,0.01,">1 nonsynonymous","Y119K S139Y S147I",3
"lib2","SARS-CoV-2","AAAAATTCATGCGCAG",14,52.95,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","L5K T15L Y39H K48D D90S P96N E141K",7
"lib2","SARS-CoV-2","AAAAATTCCAATTAAG",7,11.51,10.1,-0.74,0.13,2.25,1.02,0.01,">1 nonsynonymous","R27S D90I",2
"lib2","SARS-CoV-2","AAAAATTCCCCTACAG",2,2.91,NA,NA,NA,NA,NA,NA,"stop","C6T V37L A89*",3
"lib2","SARS-CoV-2","AAAAATTCCGAGTTGT",5,134.71,11.13,0.29,0.04,2.93,1.07,0,">1 nonsynonymous","K128N T140E Q168H",3
"lib2","SARS-CoV-2","AAAAATTCCGCGAGAT",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L I80R C102Y P149H",4
"lib2","SARS-CoV-2","AAAAATTCCTAAAAGA",5,29.54,8.41,-2.43,0.3,1.5,1.04,0.03,">1 nonsynonymous","F44W I104Q",2
"lib2","SARS-CoV-2","AAAAATTCCTGAACCC",2,0.87,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","AAAAATTCGAAGAACT",4,87.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41G G116F P133W Y175G",4
"lib2","SARS-CoV-2","AAAAATTCGCAGGTCG",2,95.32,9.77,-1.06,0.07,2.5,1.06,0,">1 nonsynonymous","D59K Q144L T201G",3
"lib2","SARS-CoV-2","AAAAATTCGCGTGGGC",12,78.11,6,-4.84,0.66,3,1.14,0,">1 nonsynonymous","R27W S43L Y50P Y93W",4
"lib2","SARS-CoV-2","AAAAATTCTAAGTGGG",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21I K56R F62S E141V",4
"lib2","SARS-CoV-2","AAAAATTCTATACTAA",8,68.8,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G9E V37G F134V G152P P161A",5
"lib2","SARS-CoV-2","AAAAATTCTCCTCAAA",2,10.98,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F44T V103R H189R",3
"lib2","SARS-CoV-2","AAAAATTCTCGTTTAT",6,19.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91C I104E",2
"lib2","SARS-CoV-2","AAAAATTCTCTCTGCT",5,18.04,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y50C P96R S139P P197T",4
"lib2","SARS-CoV-2","AAAAATTCTTAATTAG",8,18.07,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6K N13S P133L",3
"lib2","SARS-CoV-2","AAAAATTCTTCAATCT",5,84.76,10.8,-0.03,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATTGACCTCAAA",11,0.17,NA,NA,NA,NA,NA,NA,"stop","K56* F62P V77Y T100P G152V",5
"lib2","SARS-CoV-2","AAAAATTGCGATTGTA",1,41.15,10.79,-0.05,0.03,2.96,1.04,0,">1 nonsynonymous","G51R K114H",2
"lib2","SARS-CoV-2","AAAAATTGTGAAAAGG",5,3.1,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","AAAAATTGTTTAATAA",12,214.45,9.57,-1.26,0.02,2.92,1.03,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","AAAAATTTACATCCCT",2,1.32,NA,NA,NA,NA,NA,NA,"stop","Y143* L162G",2
"lib2","SARS-CoV-2","AAAAATTTATAAACAG",7,49.13,9.32,-1.52,0.08,1.83,1.05,0,">1 nonsynonymous","G83M A89Q",2
"lib2","SARS-CoV-2","AAAAATTTATCTCGAT",11,103.89,10.87,0.03,0.04,2.93,1.05,0,">1 nonsynonymous","I2F P149A",2
"lib2","SARS-CoV-2","AAAAATTTATTAGGAC",2,10.85,11.09,0.25,0.12,2.86,1.05,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAAATTTCATGATAG",9,55.31,8.87,-1.97,0.09,1.5,1.12,0,">1 nonsynonymous","K26A L60S P96T",3
"lib2","SARS-CoV-2","AAAAATTTCCAAAGTG",3,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W D90Y P96T C102I",4
"lib2","SARS-CoV-2","AAAAATTTTACTAAGC",4,95.87,10.68,-0.16,0.04,2.93,1.05,0,"1 nonsynonymous","D59C",1
"lib2","SARS-CoV-2","AAAAATTTTATATACG",3,64.55,10.87,0.03,0.07,2.96,1.06,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","AAAAATTTTTAATCCT",8,98.29,7.9,-2.94,0.12,1.77,1.14,0,">1 nonsynonymous","D34N Q168M Q176L",3
"lib2","SARS-CoV-2","AAAACAAAAAATAGTT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","P96C C102W W106* G146L",4
"lib2","SARS-CoV-2","AAAACAAAAAATGCTG",1,0.47,NA,NA,NA,NA,NA,NA,"stop","F44* V71M G116N R136C",4
"lib2","SARS-CoV-2","AAAACAAAAACATAAC",6,55.22,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","A18V L95P N107R F134Y",4
"lib2","SARS-CoV-2","AAAACAAAAACCAACG",7,199.63,9.82,-1.01,0.06,2.2,1.04,0,"1 nonsynonymous","L38N",1
"lib2","SARS-CoV-2","AAAACAAAAATATCCA",8,183.85,10.82,-0.01,0.04,2.93,1.07,0,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","AAAACAAAAGCGGACA",7,28.1,7.91,-2.92,0.26,1.57,1.08,0.03,">1 nonsynonymous","N1L S45Q Q176K",3
"lib2","SARS-CoV-2","AAAACAAAAGGTGTAA",6,18.83,8.92,-1.92,0.26,1.5,1.02,0.06,">1 nonsynonymous","L57A V181A",2
"lib2","SARS-CoV-2","AAAACAAAAGTCCCCA",4,8.61,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86S Y93C G155A",3
"lib2","SARS-CoV-2","AAAACAAAATTACTCA",2,9.01,6,-4.84,2,3,1.09,0,">1 nonsynonymous","K87M P96N I104Q V115E",4
"lib2","SARS-CoV-2","AAAACAAACAACCGGA",7,0.12,NA,NA,NA,NA,NA,NA,"stop","G86V T100G N107M N120P K132M G155*",6
"lib2","SARS-CoV-2","AAAACAAACAACTAAG",3,74.65,10.79,-0.04,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACAAACATAGATA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","I2K V77P L122* G152S A192S",5
"lib2","SARS-CoV-2","AAAACAAACCAGTGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","T3M G74L F156*",3
"lib2","SARS-CoV-2","AAAACAAACCGCACAA",2,73.29,9.56,-1.27,0.07,2.45,1.1,0,">1 nonsynonymous","Q144L E154M",2
"lib2","SARS-CoV-2","AAAACAAACGCTCTGA",2,103.35,9.26,-1.58,0.05,2.89,1.09,0,">1 nonsynonymous","G9L Y119K",2
"lib2","SARS-CoV-2","AAAACAAAGAACTGGA",8,171.75,10.77,-0.07,0.03,2.91,1.07,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","AAAACAAAGCGGATCG",3,21.09,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","A145S Y165Q G174Q",3
"lib2","SARS-CoV-2","AAAACAAAGCTTGAGT",6,54.64,8.81,-2.03,0.15,2.03,1.08,0.01,">1 nonsynonymous","N107H K132L",2
"lib2","SARS-CoV-2","AAAACAAATAAACACG",9,65.28,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N40H Y93P",2
"lib2","SARS-CoV-2","AAAACAAATATGCCAA",10,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93G V103P",2
"lib2","SARS-CoV-2","AAAACAAATATTCAGT",3,44.11,10.32,-0.52,0.05,2.75,1.04,0,">1 nonsynonymous","T3P A33V G83T",3
"lib2","SARS-CoV-2","AAAACAAATTACGCGT",1,21.36,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V65G W106V F134N N157V",4
"lib2","SARS-CoV-2","AAAACAAATTCAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37S G146D E154*",3
"lib2","SARS-CoV-2","AAAACAACAAAAAGTA",9,109.73,9.38,-1.46,0.07,1.88,1.07,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AAAACAACATTTGACT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","F12* T63K D97G I104F D112H T148P",6
"lib2","SARS-CoV-2","AAAACAACCAATCTAC",9,1.22,NA,NA,NA,NA,NA,NA,"stop","T63V L95K E154* L183A",4
"lib2","SARS-CoV-2","AAAACAACCCTCACCC",11,214.1,8.31,-2.53,0.12,2.57,1.06,0.01,">1 nonsynonymous","Y119T G146R",2
"lib2","SARS-CoV-2","AAAACAACCTACCGTG",4,60.4,9.86,-0.98,0.07,2.11,1.01,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","AAAACAACGAATACCA",3,35.93,10.15,-0.69,0.09,2.83,1,0.01,">1 nonsynonymous","S41M D98L V173Y",3
"lib2","SARS-CoV-2","AAAACAACTATAACGA",10,278.03,10.46,-0.38,0.02,2.93,1.03,0,">1 nonsynonymous","D90H T100R",2
"lib2","SARS-CoV-2","AAAACAACTCAGTTAT",1,17.32,7.32,-3.52,0.25,1.5,1.07,0.02,">1 nonsynonymous","G83Y C150S V173L T201L",4
"lib2","SARS-CoV-2","AAAACAAGAATATCGT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","AAAACAAGACCTAATC",3,55.06,10.68,-0.16,0.08,2.93,1.07,0,">1 nonsynonymous","S45Y T55S T85R",3
"lib2","SARS-CoV-2","AAAACAAGACGATGCG",3,1.67,NA,NA,NA,NA,NA,NA,"stop","T3H V52L S129* S147P E154A P197A",6
"lib2","SARS-CoV-2","AAAACAAGAGTCTTAC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","E10* Q84S C102S N130K G172Y",5
"lib2","SARS-CoV-2","AAAACAAGATCCTTAG",6,108.88,10.81,-0.03,0.05,2.95,1.08,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","AAAACAAGCACGATTT",15,133.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y91E R136S T148L",3
"lib2","SARS-CoV-2","AAAACAAGCCCCTGAG",13,86.25,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C31T A42K T55S A67S N92M Y121V K128F F156P",8
"lib2","SARS-CoV-2","AAAACAAGCGCTAAAT",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55D T63L",2
"lib2","SARS-CoV-2","AAAACAAGCTTGGTAT",2,1.07,NA,NA,NA,NA,NA,NA,"stop","A33* P169*",2
"lib2","SARS-CoV-2","AAAACAAGCTTTTAAG",5,102.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25F Y66A N107A Y121S F167L",5
"lib2","SARS-CoV-2","AAAACAAGGAATGAGC",5,29.46,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T3L Y91K N109L L125P A145S",5
"lib2","SARS-CoV-2","AAAACAAGTAATTACA",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11P G86N",2
"lib2","SARS-CoV-2","AAAACAAGTACCTAGG",5,11.66,8.2,-2.63,0.4,1.7,1.08,0.06,">1 nonsynonymous","V11M Y165L",2
"lib2","SARS-CoV-2","AAAACAATAATAATGA",3,68.51,7.5,-3.34,0.25,1.5,1.06,0.02,">1 nonsynonymous","G51D L57G N64L T140E K199I",5
"lib2","SARS-CoV-2","AAAACAATATTACACA",4,69.46,10.81,-0.02,0.06,2.9,1.09,0,"1 nonsynonymous","K114Y",1
"lib2","SARS-CoV-2","AAAACAATCCAAAGTT",2,21.79,8.88,-1.95,0.28,1.5,1.06,0.04,">1 nonsynonymous","L131H Q168W",2
"lib2","SARS-CoV-2","AAAACAATGCTAACTA",5,0.32,NA,NA,NA,NA,NA,NA,"stop","F62* W106N",2
"lib2","SARS-CoV-2","AAAACAATTAGGCGCG",23,131.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38N S53F Y165A",3
"lib2","SARS-CoV-2","AAAACAATTAGTATAA",8,94.58,10.79,-0.05,0.08,2.76,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACAATTATATCAT",6,59.29,9.36,-1.47,0.13,1.87,1.16,0.01,">1 nonsynonymous","S41G F134L Y178V",3
"lib2","SARS-CoV-2","AAAACACAAAAGTGAA",1,1.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","AAAACACACAACCAAT",3,8.29,8.88,-1.96,0.36,1.5,1.16,0.04,">1 nonsynonymous","I80L Y121S",2
"lib2","SARS-CoV-2","AAAACACACGATATGA",2,19.21,10.87,0.03,0.09,2.85,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAACACACGTTCAAC",14,134.04,10.84,0,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACACACTCATGAC",4,61.65,7.78,-3.05,0.37,1.5,1.08,0.05,">1 nonsynonymous","K94S K128F P149T",3
"lib2","SARS-CoV-2","AAAACACACTGACGAA",1,76.12,10.2,-0.64,0.04,2.9,1.03,0,">1 nonsynonymous","T15K A145I",2
"lib2","SARS-CoV-2","AAAACACACTTGAGGG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","Y123* S129R T201I",3
"lib2","SARS-CoV-2","AAAACACATAGAGCAA",9,151.57,9.05,-1.79,0.12,1.83,1.06,0.01,">1 nonsynonymous","V11Q N107S V153S",3
"lib2","SARS-CoV-2","AAAACACATAGCCATT",1,2.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184T",1
"lib2","SARS-CoV-2","AAAACACATCTATTCA",4,27.97,6,-4.84,2,3,1.24,0,">1 nonsynonymous","I28S L95Y W106Y P191T",4
"lib2","SARS-CoV-2","AAAACACATTCACCTG",2,5.62,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N1R I72Y Y119F T148I",4
"lib2","SARS-CoV-2","AAAACACCATGCAAAT",9,370.54,10.28,-0.55,0.02,2.82,1.06,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","AAAACACCGCCTTTGG",9,199.99,10.81,-0.02,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACACCGTCAGGCT",7,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S F99M K198F",3
"lib2","SARS-CoV-2","AAAACACCTCATTCCA",6,106.54,6.6,-4.23,0.18,1.66,1.09,0,">1 nonsynonymous","S69D Y119V",2
"lib2","SARS-CoV-2","AAAACACCTTCCACAG",9,23.46,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","L60Q V103A D137P",3
"lib2","SARS-CoV-2","AAAACACGAAATCTGA",1,11.51,10.95,0.12,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACACGAAGTAATG",5,40.11,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P54L G101A V103G R127E F134G P149D G152S",7
"lib2","SARS-CoV-2","AAAACACGAGCCATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V52Q T148I G152T P161Y G174*",5
"lib2","SARS-CoV-2","AAAACACGATACCGAA",8,162.64,10.68,-0.15,0.04,2.88,1.13,0,">1 nonsynonymous","K56E G116E",2
"lib2","SARS-CoV-2","AAAACACGCAATTCAG",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P T63I S108P G196R T201I",5
"lib2","SARS-CoV-2","AAAACACTAAAGCGTT",2,11.94,9.86,-0.98,0.19,1.98,1.08,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AAAACACTACCCATTG",5,40.4,9.79,-1.05,0.13,2.13,1.02,0.01,">1 nonsynonymous","L5S D34M G83R S129H",4
"lib2","SARS-CoV-2","AAAACACTAGATAGCA",9,1.46,NA,NA,NA,NA,NA,NA,"stop","C6* Y39M G83L V103E",4
"lib2","SARS-CoV-2","AAAACACTCAGTCACT",7,74.7,6.74,-4.1,0.33,1.5,1.12,0.02,">1 nonsynonymous","C6W D90G S129H Q163E",4
"lib2","SARS-CoV-2","AAAACACTTCAATGGG",5,44.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F8W V71G G83L R127G G174M",5
"lib2","SARS-CoV-2","AAAACACTTCTCAATA",1,12.6,9.42,-1.42,0.45,1.5,1.09,0.05,">1 nonsynonymous","F17G D112I",2
"lib2","SARS-CoV-2","AAAACAGAAACTGGTA",7,161.11,7.51,-3.32,0.12,1.57,1.1,0,">1 nonsynonymous","G51T K114G A145M Q168L P197K",5
"lib2","SARS-CoV-2","AAAACAGAAATTAAAT",2,31.46,6.03,-4.8,1.42,1.5,1.33,0.04,">1 nonsynonymous","Y91K L131D",2
"lib2","SARS-CoV-2","AAAACAGACCACAAAG",5,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T C102T G116V P149S V173P",5
"lib2","SARS-CoV-2","AAAACAGAGAGATAAA",2,55.73,6.89,-3.95,0.16,1.7,1.17,0.01,">1 nonsynonymous","L5Q V77N L188H",3
"lib2","SARS-CoV-2","AAAACAGAGAGTACCC",2,21.51,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F62K D90V G172K",3
"lib2","SARS-CoV-2","AAAACAGAGTTTGTAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","L95* R136N",2
"lib2","SARS-CoV-2","AAAACAGATAGTACCT",1,44.26,10.79,-0.04,0.07,2.85,1.15,0,">1 nonsynonymous","D97E L122T",2
"lib2","SARS-CoV-2","AAAACAGCAGTAACAG",4,2.28,NA,NA,NA,NA,NA,NA,"stop","L60* G155D",2
"lib2","SARS-CoV-2","AAAACAGCCAGGAATA",3,21.9,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F8D C61R G146W Y175N",4
"lib2","SARS-CoV-2","AAAACAGCCCACCAAG",4,99.96,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D98C R124Y D137M V173K Q176I",5
"lib2","SARS-CoV-2","AAAACAGCCCTGTCCG",1,15.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A T63E P96S T140P",4
"lib2","SARS-CoV-2","AAAACAGCTAAAGATA",9,1.37,NA,NA,NA,NA,NA,NA,"stop","K48* Q168H",2
"lib2","SARS-CoV-2","AAAACAGGAGGTGATC",8,163.03,10.77,-0.07,0.04,2.88,1.14,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","AAAACAGGATACTAAA",7,52.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61S R136H C150N",3
"lib2","SARS-CoV-2","AAAACAGGCTCCAGCC",9,107.04,10.84,0,0.05,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACAGTAAACTCTT",1,15.45,10.72,-0.11,0.12,2.91,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAACAGTCCTTGTGA",3,29.32,7.02,-3.82,0.49,1.5,1.23,0.04,">1 nonsynonymous","T100P I104H T201S",3
"lib2","SARS-CoV-2","AAAACAGTGCAATTTG",1,27.64,8.86,-1.98,0.11,2.56,1.13,0,">1 nonsynonymous","E10L V65A F126C",3
"lib2","SARS-CoV-2","AAAACATAAACAAAAA",5,46.8,8.24,-2.59,0.31,1.5,1.03,0.04,">1 nonsynonymous","S53R T63V Y91V P149I",4
"lib2","SARS-CoV-2","AAAACATAAACAATAT",11,173.97,10.09,-0.75,0.04,2.7,1.02,0,">1 nonsynonymous","T85F G152L",2
"lib2","SARS-CoV-2","AAAACATAAATTGACC",7,15.6,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y50R N107M F160I",3
"lib2","SARS-CoV-2","AAAACATAACAAAAGT",1,14.31,9.85,-0.99,0.13,1.92,1.07,0,"1 nonsynonymous","V11G",1
"lib2","SARS-CoV-2","AAAACATAAGAGACTT",12,253.15,10.31,-0.52,0.03,2.85,1.04,0,"1 nonsynonymous","D34H",1
"lib2","SARS-CoV-2","AAAACATAAGCTTACA",4,70.68,10.93,0.09,0.05,2.96,1.04,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","AAAACATACTAAAAGT",4,68.82,10.83,-0.01,0.04,2.95,1.07,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","AAAACATAGAGATACG",2,39.63,10.73,-0.1,0.07,2.94,1.08,0,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","AAAACATAGCAGAACA",6,73.09,8.13,-2.71,0.15,2.03,1.1,0.01,">1 nonsynonymous","G83S S113K",2
"lib2","SARS-CoV-2","AAAACATATTACGACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","AAAACATATTGAATTA",1,9.74,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A18M S45N F62R D75N K132V R136T Y143I",7
"lib2","SARS-CoV-2","AAAACATCAACTCACT",3,52.35,9.96,-0.87,0.1,2.53,1.01,0,">1 nonsynonymous","Y35T D90S K114M P197S",4
"lib2","SARS-CoV-2","AAAACATCAGGATTTA",2,11.09,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","C61A I88G I142T",3
"lib2","SARS-CoV-2","AAAACATCATAAGGTG",6,39.05,8.3,-2.54,0.2,2.21,1.08,0.02,">1 nonsynonymous","S43N G74D",2
"lib2","SARS-CoV-2","AAAACATCATGGAGGC",3,20.52,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","T3H F44N V71A D98L L122G",5
"lib2","SARS-CoV-2","AAAACATCCAACGCAA",4,14.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13S F47L K56G F70V G86P N107C F126V",7
"lib2","SARS-CoV-2","AAAACATCCCATCCAT",3,32.97,7.58,-3.25,0.54,1.5,1.18,0.06,">1 nonsynonymous","K94L V103F",2
"lib2","SARS-CoV-2","AAAACATGACACACCC",1,11.66,7.94,-2.9,0.21,1.72,1.01,0.02,">1 nonsynonymous","S19E Y39M G155E",3
"lib2","SARS-CoV-2","AAAACATGCCATCTTA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","L57Q R127* S139V V173T",4
"lib2","SARS-CoV-2","AAAACATTAAGATGAA",1,7,10.84,0,0.09,2.88,1.11,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","AAAACATTAGAGATCA",5,49.04,8.58,-2.26,0.23,1.5,1.05,0.03,">1 nonsynonymous","I28V S41T V77T Q84R",4
"lib2","SARS-CoV-2","AAAACATTAGTTCCCA",6,15.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M N13L S19P D59L F70V",5
"lib2","SARS-CoV-2","AAAACATTCAGGCCAT",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q G155W",2
"lib2","SARS-CoV-2","AAAACATTCATATATC",1,8.23,NA,NA,NA,NA,NA,NA,"stop","A14V S29L K94* F156T",4
"lib2","SARS-CoV-2","AAAACATTGTATAACT",2,45.1,9.02,-1.82,0.07,2.79,1.04,0,">1 nonsynonymous","T46G L125V T201C",3
"lib2","SARS-CoV-2","AAAACCAAAAACCACA",4,1.18,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","AAAACCAAAAATTATT",1,12.19,10.84,0,0.05,2.97,1.04,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","AAAACCAAACTTATAT",9,16.66,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N1K C6R V20E W106P Y121N Y143L",6
"lib2","SARS-CoV-2","AAAACCAACACTGTTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80P D98P G166L",3
"lib2","SARS-CoV-2","AAAACCAAGAAGACTA",2,2.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A18N",1
"lib2","SARS-CoV-2","AAAACCAATACGACAC",4,66,9.1,-1.73,0.09,2.7,1.08,0,">1 nonsynonymous","S139D G146T E186W",3
"lib2","SARS-CoV-2","AAAACCAATCACAAAT",3,54.5,10.58,-0.26,0.03,2.91,1.09,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","AAAACCAATCACCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35N I138S F160K P197*",4
"lib2","SARS-CoV-2","AAAACCAATCTAATCA",3,24.86,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36M C49R Y159C",3
"lib2","SARS-CoV-2","AAAACCAATTTTAGGA",24,76.04,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","P54K Y91F W106P C150I K199Y",5
"lib2","SARS-CoV-2","AAAACCACCAAGCCAT",5,12.87,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","G9S A67S D75E G83Y N157T G196R S200M",7
"lib2","SARS-CoV-2","AAAACCACCCCTATCA",2,17.01,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G101R N107K",2
"lib2","SARS-CoV-2","AAAACCACTGATAAAA",2,19.46,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I72K N157P",2
"lib2","SARS-CoV-2","AAAACCACTTAACAAG",4,1.11,NA,NA,NA,NA,NA,NA,"stop","I72F T100Q K198A T201*",4
"lib2","SARS-CoV-2","AAAACCAGAACCCTCT",1,25.52,10.66,-0.17,0.04,2.99,1.03,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","AAAACCAGACAAACCT",6,90.92,10.83,-0.01,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACCAGATGACGTA",7,39.78,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Y93A E141Y G155I F185T",4
"lib2","SARS-CoV-2","AAAACCAGCAAAGGCA",9,195.05,10.4,-0.43,0.03,2.85,1.08,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","AAAACCAGTAGTCCAT",1,6.5,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","G86V Q144R P169A",3
"lib2","SARS-CoV-2","AAAACCATAATAGTTC",1,11.98,9.39,-1.45,0.08,2.11,1,0,">1 nonsynonymous","P96T S129I N130R T148N",4
"lib2","SARS-CoV-2","AAAACCATACGCGTTA",8,13.8,9.29,-1.55,0.15,1.65,1.04,0.02,">1 nonsynonymous","T3N C49Y",2
"lib2","SARS-CoV-2","AAAACCATACTCCCAT",8,97.72,10.66,-0.17,0.06,2.82,1.09,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","AAAACCATAGTAAAAA",3,24.1,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G51D C61W V103G N120K G174T",5
"lib2","SARS-CoV-2","AAAACCATCTATTCGT",1,35.44,10.31,-0.53,0.13,2.76,1,0.01,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","AAAACCATCTTAATGA",5,55.04,8.42,-2.42,0.14,2.88,1.08,0.01,">1 nonsynonymous","N64L F126A P191V",3
"lib2","SARS-CoV-2","AAAACCATTACTATCT",2,41.94,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D68R Y119C Y178M",3
"lib2","SARS-CoV-2","AAAACCATTCAAGCAT",4,9.16,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Q84H G152H G174R V182D",4
"lib2","SARS-CoV-2","AAAACCATTTACGAAC",11,109.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14G V37C L60D G101Y",4
"lib2","SARS-CoV-2","AAAACCCAAACTGGGG",15,213.66,10.83,-0.01,0.04,2.87,1.11,0,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","AAAACCCAGAATGAAG",2,29.34,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V11T F99S Y123L D137V T148M H189Y",6
"lib2","SARS-CoV-2","AAAACCCATAAACATC",28,246.37,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F12S K26I F99S N110H",4
"lib2","SARS-CoV-2","AAAACCCATGGCCTAT",2,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R R73L",2
"lib2","SARS-CoV-2","AAAACCCATTGTTTCA",2,1.28,NA,NA,NA,NA,NA,NA,"stop","T46D R73C S113*",3
"lib2","SARS-CoV-2","AAAACCCCAAAGCAAA",2,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G T15N F156C V182R",4
"lib2","SARS-CoV-2","AAAACCCCAATTTAAA",9,17.08,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L95R V173R T201L",3
"lib2","SARS-CoV-2","AAAACCCCACCATTGA",4,38.4,10.53,-0.31,0.05,2.94,1.09,0,">1 nonsynonymous","K48T N151L",2
"lib2","SARS-CoV-2","AAAACCCCCGAAGACA",2,67.02,9.99,-0.84,0.07,2.37,1.06,0,">1 nonsynonymous","F47S S53Y L122S",3
"lib2","SARS-CoV-2","AAAACCCCCTACCTCC",7,102,10.87,0.03,0.04,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACCCCGCTATTAC",12,274.4,9.77,-1.07,0.04,2.1,1.07,0,">1 nonsynonymous","A18D A22T V32Q S69T V153A A192T",6
"lib2","SARS-CoV-2","AAAACCCCTCGCCCAA",5,151.58,10.65,-0.18,0.04,2.95,1.06,0,">1 nonsynonymous","C61Q S129I",2
"lib2","SARS-CoV-2","AAAACCCCTTAAGAAA",5,28.3,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6I Y39S T55H G83Y F99A",5
"lib2","SARS-CoV-2","AAAACCCGAACAGTGT",5,52.15,10.98,0.15,0.09,2.87,1,0,"1 nonsynonymous","Y35F",1
"lib2","SARS-CoV-2","AAAACCCGCAAATCCT",2,111.51,10.8,-0.04,0.06,2.94,1.07,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AAAACCCGGATACTAC",6,57.9,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S19L S45K",2
"lib2","SARS-CoV-2","AAAACCCGGCATGCAA",16,133.82,9.33,-1.5,0.08,1.9,1.08,0,">1 nonsynonymous","A105V N151I",2
"lib2","SARS-CoV-2","AAAACCCTAAAAAAGA",4,12.37,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","A89V D90S R127Y G174I",4
"lib2","SARS-CoV-2","AAAACCCTTAAACAGA",4,38.66,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y39Q A89Y Q144V",3
"lib2","SARS-CoV-2","AAAACCGAAATACCAT",7,96.43,10.72,-0.12,0.05,2.91,1.09,0,">1 nonsynonymous","D34N L122S",2
"lib2","SARS-CoV-2","AAAACCGAACGACCGA",3,95.64,9.89,-0.95,0.05,2.81,1.06,0,">1 nonsynonymous","S36Y K87I T148P",3
"lib2","SARS-CoV-2","AAAACCGAAGGGGATA",16,210.3,10.17,-0.67,0.06,2.59,1.05,0,"1 nonsynonymous","C49F",1
"lib2","SARS-CoV-2","AAAACCGACACCAAGG",2,10.69,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2L V103K",2
"lib2","SARS-CoV-2","AAAACCGACCGTTCAG",2,9.53,10.21,-0.63,0.06,2.96,1.03,0,">1 nonsynonymous","D90Y N120R",2
"lib2","SARS-CoV-2","AAAACCGATCTCTGCT",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100F F167V L187S",3
"lib2","SARS-CoV-2","AAAACCGCCACGCACG",6,158.09,10.55,-0.29,0.04,2.94,1.05,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","AAAACCGCCCAAGTAG",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAACCGGATTAAAAC",1,8.83,6.21,-4.63,0.58,3,1.08,0,">1 nonsynonymous","S36Y F99A S113H F126G C150D K198R",6
"lib2","SARS-CoV-2","AAAACCGGATTGGTCG",4,41.72,8.64,-2.19,0.11,2.24,1.13,0,">1 nonsynonymous","I2K V37N P149F G155C",4
"lib2","SARS-CoV-2","AAAACCGTCACTCTGA",19,6.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y A81M",2
"lib2","SARS-CoV-2","AAAACCGTCAGCCCTA",8,95.11,10.68,-0.15,0.03,2.92,1.07,0,"1 nonsynonymous","Y143H",1
"lib2","SARS-CoV-2","AAAACCGTGATAAAAC",2,35.59,10.73,-0.11,0.1,2.73,1.14,0,"1 nonsynonymous","K26L",1
"lib2","SARS-CoV-2","AAAACCGTTTAACGCT",6,11.36,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N13D T63R K94V S129V R136L K199G",6
"lib2","SARS-CoV-2","AAAACCGTTTAACTAG",1,5.78,6,-4.84,2,3,1.15,0.02,">1 nonsynonymous","F62L D90I D97R T100D V173R",5
"lib2","SARS-CoV-2","AAAACCGTTTTTGCTT",8,19.22,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N1W R16M N58V V103N Y123A Y178V",6
"lib2","SARS-CoV-2","AAAACCTAAACTTTAC",5,35.67,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","F99Q Y121K",2
"lib2","SARS-CoV-2","AAAACCTAACAAAAAG",1,101.7,9.08,-1.76,0.04,2.98,1.08,0,"1 nonsynonymous","G166W",1
"lib2","SARS-CoV-2","AAAACCTAACAACAAA",9,59.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S I72Q N120G",3
"lib2","SARS-CoV-2","AAAACCTAGCCAATAT",6,17.18,9.54,-1.3,0.14,1.81,1.01,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","AAAACCTCAACCATCA",4,45.66,10.9,0.07,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACCTCAACGGTGT",2,48.33,9.28,-1.55,0.08,1.99,1.05,0,">1 nonsynonymous","Y35E F44Y P133V A192R",4
"lib2","SARS-CoV-2","AAAACCTCAACTAATG",5,52.6,10.01,-0.83,0.05,2.93,1.01,0,">1 nonsynonymous","L5Q K87E E154S",3
"lib2","SARS-CoV-2","AAAACCTCATATATTT",3,7.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L D68Q L95P",3
"lib2","SARS-CoV-2","AAAACCTCATCCGACT",1,135.81,7.03,-3.8,0.22,1.58,1.14,0.01,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","AAAACCTCATGCAATC",2,41.55,7.58,-3.26,0.32,1.5,1,0.03,">1 nonsynonymous","I2T Y21N Y39I D68A N107P",5
"lib2","SARS-CoV-2","AAAACCTCCCGTCACA",4,62.38,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N64W A105L C158S",3
"lib2","SARS-CoV-2","AAAACCTGAAAACATA",1,21.78,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D90H Q176T",2
"lib2","SARS-CoV-2","AAAACCTGAATAAAAT",1,41.91,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","S29V C150K G174M",3
"lib2","SARS-CoV-2","AAAACCTGCGCCGTAA",1,23.73,10.86,0.02,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACCTGGAACACTT",9,9.56,NA,NA,NA,NA,NA,NA,"stop","F126M P133V V173* P177A V181M S184L",6
"lib2","SARS-CoV-2","AAAACCTTAGCCACTG",9,183.82,10.51,-0.32,0.03,2.91,1.06,0,">1 nonsynonymous","N120S K128S S129I",3
"lib2","SARS-CoV-2","AAAACCTTCAGCTTAA",3,12.13,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5K R25E W106G E154F",4
"lib2","SARS-CoV-2","AAAACCTTCATGGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","D75* S164C",2
"lib2","SARS-CoV-2","AAAACCTTGGTCATAA",10,290.65,8.3,-2.53,0.09,1.8,1.11,0,">1 nonsynonymous","L38V P161T T201N",3
"lib2","SARS-CoV-2","AAAACCTTGTTCTCTT",2,69,10.87,0.03,0.05,2.95,1.06,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","AAAACCTTTTGAAACT",8,54.88,8.84,-2,0.14,1.74,1.11,0.01,">1 nonsynonymous","C6T S41L N58A F134E",4
"lib2","SARS-CoV-2","AAAACGAAAAGAGTCT",6,104.61,6.23,-4.6,0.34,1.5,1.13,0.01,">1 nonsynonymous","N64A I142P F156P L162S",4
"lib2","SARS-CoV-2","AAAACGAAATCCGGGA",7,106.23,10.8,-0.03,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACGAATAAATCGA",1,44.59,10.46,-0.37,0.07,2.93,1,0,">1 nonsynonymous","G146S G152F",2
"lib2","SARS-CoV-2","AAAACGAATAACACGA",13,104.79,9.88,-0.96,0.05,2.45,1.01,0,">1 nonsynonymous","N58Y V115M S139D",3
"lib2","SARS-CoV-2","AAAACGAATAAGAAAC",5,58.78,10.67,-0.17,0.05,3,1.01,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","AAAACGAATATGTAGT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S Y91T T140W Q168L",4
"lib2","SARS-CoV-2","AAAACGAATTAATAGG",1,35.19,10.02,-0.82,0.11,2.51,1.07,0,"1 nonsynonymous","W106Q",1
"lib2","SARS-CoV-2","AAAACGACAAATACAC",6,67.19,9.27,-1.57,0.17,1.64,1.09,0.02,">1 nonsynonymous","A14V K48N D98M T148S",4
"lib2","SARS-CoV-2","AAAACGACAACAAATT",14,200.46,10.22,-0.61,0.04,2.88,1.03,0,">1 nonsynonymous","G9A Q79S",2
"lib2","SARS-CoV-2","AAAACGACGAAAAACC",1,21.91,10.84,0,0.07,2.99,1.04,0,"1 nonsynonymous","S29C",1
"lib2","SARS-CoV-2","AAAACGAGACAACTCA",2,56.06,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S45V F62L G86L Y119T K132V Q176E",6
"lib2","SARS-CoV-2","AAAACGAGACACATAT",2,27.05,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12E N40A V103F",3
"lib2","SARS-CoV-2","AAAACGAGTGAAAGAG",3,17.89,6,-4.84,1.2,2.42,1.18,0,">1 nonsynonymous","A14S I28T T46A Y91Q I104M",5
"lib2","SARS-CoV-2","AAAACGATAATGCCGA",9,72.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93P R136P C150S S164R P197M",5
"lib2","SARS-CoV-2","AAAACGATACGAGTTT",6,123.27,8.61,-2.23,0.08,2.8,1.08,0,">1 nonsynonymous","C102I L125T G155E",3
"lib2","SARS-CoV-2","AAAACGATAGAGTACC",9,167.68,9.17,-1.67,0.07,1.98,1.06,0,">1 nonsynonymous","C6N I28W K56E V71I",4
"lib2","SARS-CoV-2","AAAACGATTATGACAC",2,34.47,9.68,-1.15,0.1,2.65,1.03,0,">1 nonsynonymous","E10M S53V T148R G174T L187K",5
"lib2","SARS-CoV-2","AAAACGATTTTGACTA",3,15.76,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y178N V182L",2
"lib2","SARS-CoV-2","AAAACGCAAATTGGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D G83I R127E Y143N V182K",5
"lib2","SARS-CoV-2","AAAACGCAAGAAAGCT",1,18.59,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S29T C49H D59S G83I G155V",5
"lib2","SARS-CoV-2","AAAACGCAGCACCCTA",1,60.76,9.18,-1.66,0.07,2.93,1,0,">1 nonsynonymous","G117T K132G",2
"lib2","SARS-CoV-2","AAAACGCAGGGCGTAC",5,120.66,10.44,-0.39,0.04,2.95,1.03,0,">1 nonsynonymous","N4C K26V K48A",3
"lib2","SARS-CoV-2","AAAACGCATGAGGTGA",2,16.02,6.12,-4.71,1.37,1.5,1.26,0.07,">1 nonsynonymous","P96K R136M G174Y L183F",4
"lib2","SARS-CoV-2","AAAACGCCAACAGAAA",11,73.81,9.95,-0.89,0.08,2.39,1.03,0,">1 nonsynonymous","Y39W W106I S200M",3
"lib2","SARS-CoV-2","AAAACGCCACTCCATA",5,147.42,9.6,-1.24,0.06,2.82,1.09,0,">1 nonsynonymous","C61Y N120L G174R S200T",4
"lib2","SARS-CoV-2","AAAACGCCATCAACAA",4,24.01,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I2P K48M T55L K94A D137C T201E",6
"lib2","SARS-CoV-2","AAAACGCCATTGAACG",2,70.69,6,-4.84,2,1.5,1.23,0.06,"1 nonsynonymous","Y93G",1
"lib2","SARS-CoV-2","AAAACGCCGCCTGCGC",6,410.7,10.28,-0.56,0.03,2.88,1.02,0,">1 nonsynonymous","K48V A81S",2
"lib2","SARS-CoV-2","AAAACGCCTCCTAAAA",5,62.13,10.24,-0.6,0.08,2.22,1,0,">1 nonsynonymous","T100E Y123L",2
"lib2","SARS-CoV-2","AAAACGCCTGCAAAAT",9,68.77,9.8,-1.03,0.1,2.07,1.08,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","AAAACGCCTTCAGCCA",7,99.12,10.82,-0.01,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACGCGCAGGCTGC",1,14.02,9.37,-1.47,0.09,3,1.02,0,">1 nonsynonymous","G117A T140M",2
"lib2","SARS-CoV-2","AAAACGCTCTTTATGA",10,39.46,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F17R S53R A105R T148Y V181D",5
"lib2","SARS-CoV-2","AAAACGCTGGAATGAG",2,49.39,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I28L F44Q P82V N107C S129G",5
"lib2","SARS-CoV-2","AAAACGGACAGACAAA",8,1.21,NA,NA,NA,NA,NA,NA,"stop","D34P A81P L95V Q144H F156*",5
"lib2","SARS-CoV-2","AAAACGGAGCATCCGG",6,118.75,9.83,-1,0.09,2.1,1.05,0,"1 nonsynonymous","I28Q",1
"lib2","SARS-CoV-2","AAAACGGAGCTCAAAC",1,15.14,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","F70S N92T",2
"lib2","SARS-CoV-2","AAAACGGAGTTTGTAA",1,24.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10T D68Q N107P V115L Y119L",5
"lib2","SARS-CoV-2","AAAACGGATTATGTAG",5,204.82,9.54,-1.3,0.02,2.95,1.07,0,">1 nonsynonymous","Y119N K199V",2
"lib2","SARS-CoV-2","AAAACGGCGAATTACT",5,18.04,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","D59P G86K",2
"lib2","SARS-CoV-2","AAAACGGCTCACTTAG",10,20.17,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A14P T63C F99K N107H",4
"lib2","SARS-CoV-2","AAAACGGGACTCTGAG",5,77.63,10.91,0.07,0.06,2.94,1.08,0,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","AAAACGGGTAATCTTA",6,133.78,9.11,-1.72,0.22,1.5,1,0.02,">1 nonsynonymous","P54L F99I F160I",3
"lib2","SARS-CoV-2","AAAACGGGTCGACTTA",1,42.68,8.11,-2.73,0.14,2.56,1.06,0.01,">1 nonsynonymous","I80V N118H G174C",3
"lib2","SARS-CoV-2","AAAACGTAAGAGTTCA",2,14.3,6,-4.84,2,1.5,1.03,0.03,">1 nonsynonymous","R25M P82C I88D A105L E141A T148Q",6
"lib2","SARS-CoV-2","AAAACGTAATTCGACA",12,10.56,NA,NA,NA,NA,NA,NA,"stop","K26R P82F S129* L162S A190T",5
"lib2","SARS-CoV-2","AAAACGTACAATAATA",5,118.05,10.23,-0.61,0.04,2.8,1.03,0,"1 nonsynonymous","P133N",1
"lib2","SARS-CoV-2","AAAACGTACGCGAGAC",4,56.07,9.76,-1.08,0.1,2.11,1.09,0,">1 nonsynonymous","G9E V37P A89I",3
"lib2","SARS-CoV-2","AAAACGTACTAAGTTT",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V A42T Q176L",3
"lib2","SARS-CoV-2","AAAACGTAGACTTTTG",6,33.94,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L95A K128G Y178L",3
"lib2","SARS-CoV-2","AAAACGTATTATCTAT",10,93.45,10.56,-0.28,0.03,2.92,1.03,0,">1 nonsynonymous","L5M A81S T85R L122I",4
"lib2","SARS-CoV-2","AAAACGTCCGATACCT",4,20.14,9.02,-1.82,0.29,1.5,1.02,0.04,">1 nonsynonymous","C6Q P54R Y91I",3
"lib2","SARS-CoV-2","AAAACGTGCAGTCTCT",8,48.46,10.35,-0.49,0.05,2.83,1.1,0,">1 nonsynonymous","D34S E141S",2
"lib2","SARS-CoV-2","AAAACGTGGCTGTTAA",2,27.34,10.85,0.02,0.07,2.89,1.12,0,"1 nonsynonymous","T148E",1
"lib2","SARS-CoV-2","AAAACGTGGGTAACTA",4,15.69,10.82,-0.02,0.05,3,1.01,0,"1 nonsynonymous","A190D",1
"lib2","SARS-CoV-2","AAAACTAAACGTACCT",11,173.18,10.82,-0.02,0.05,2.92,1.09,0,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","AAAACTAAACTTAATA",8,85.88,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A81P N110T Y165M T170S",4
"lib2","SARS-CoV-2","AAAACTAACACTAATC",6,75.79,9.27,-1.56,0.15,1.77,1.07,0.01,"1 nonsynonymous","L162K",1
"lib2","SARS-CoV-2","AAAACTAACCACATTT",3,75.62,10.79,-0.04,0.03,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTAAGAAATATC",10,1.64,NA,NA,NA,NA,NA,NA,"stop","K26F S69R D90G S129*",4
"lib2","SARS-CoV-2","AAAACTAAGAACTAAT",11,192.65,10.92,0.09,0.06,2.88,1.13,0,">1 nonsynonymous","L5R P197L",2
"lib2","SARS-CoV-2","AAAACTAATATAGCTA",8,132.77,10.9,0.06,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTAATATGATAA",9,0.88,NA,NA,NA,NA,NA,NA,"stop","C31L D59S L162Y P169* Y175N",5
"lib2","SARS-CoV-2","AAAACTAATCTGGGTG",5,40.24,9.81,-1.03,0.07,2.46,1.02,0,">1 nonsynonymous","F62L T100F Y121L P161S N171H",5
"lib2","SARS-CoV-2","AAAACTAATGCCCTTG",1,0.78,NA,NA,NA,NA,NA,NA,"stop","P82* N107W",2
"lib2","SARS-CoV-2","AAAACTAATTAATGAA",10,84.72,10.57,-0.26,0.04,2.87,1.1,0,">1 nonsynonymous","G9S L95V S129Y",3
"lib2","SARS-CoV-2","AAAACTAATTGGATTA",1,9.65,10.73,-0.11,0.07,2.75,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTACAAGCGTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y143R G166*",2
"lib2","SARS-CoV-2","AAAACTACACGGTGTG",7,67.79,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N92L I142N C150D",3
"lib2","SARS-CoV-2","AAAACTACATCGCTAG",2,47.32,10.87,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTACCAATAAAG",3,52.63,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y35F F167C",2
"lib2","SARS-CoV-2","AAAACTACTAAACATG",10,118.73,9.77,-1.06,0.05,1.99,1.08,0,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","AAAACTACTAAGCACT",5,63.56,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N24S N120L P177G S200Q",4
"lib2","SARS-CoV-2","AAAACTACTCGCTATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","AAAACTAGAGATGAAA",5,2.39,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib2","SARS-CoV-2","AAAACTAGATCTTTAT",7,42.11,9.63,-1.2,0.07,1.95,1.02,0,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","AAAACTAGTGAATAAA",3,19.28,10.14,-0.7,0.23,2.03,1.12,0.02,">1 nonsynonymous","S41Q A89F",2
"lib2","SARS-CoV-2","AAAACTATAATACATT",13,40.16,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C61R N92M I104T L111K",4
"lib2","SARS-CoV-2","AAAACTATATTCATTA",22,310.07,8.38,-2.45,0.1,2.87,1.08,0,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","AAAACTATGATCGAAG",4,95.33,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R16A C158I",2
"lib2","SARS-CoV-2","AAAACTATGTCTTTTT",2,22.12,10.31,-0.53,0.11,2.72,1.02,0.01,">1 nonsynonymous","N64L S184I",2
"lib2","SARS-CoV-2","AAAACTATTAAATAAC",2,113.33,9.99,-0.85,0.08,2.76,1.05,0,">1 nonsynonymous","T3V G155L T201Q",3
"lib2","SARS-CoV-2","AAAACTATTAAATTAG",6,49.68,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G152I C158P",2
"lib2","SARS-CoV-2","AAAACTATTTCTAACC",2,46.64,10.15,-0.68,0.32,1.5,1,0.04,">1 nonsynonymous","C49Y D68I",2
"lib2","SARS-CoV-2","AAAACTATTTTTAGAC",4,74.97,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D90S A105K K199N",3
"lib2","SARS-CoV-2","AAAACTCAAAAGACCC",2,15.02,9.33,-1.51,0.23,1.84,1.05,0.03,">1 nonsynonymous","F17L A33P K56M K198Y",4
"lib2","SARS-CoV-2","AAAACTCACCAGGTCG",7,43.52,10.86,0.02,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTCATAATCAAC",12,175,10.77,-0.06,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTCATCAAGACT",2,22.16,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y21M R27G Y143V F156Y",4
"lib2","SARS-CoV-2","AAAACTCCAATACAAA",1,50.26,10.16,-0.67,0.04,2.92,1.1,0,">1 nonsynonymous","T46F K114S L122A G174D",4
"lib2","SARS-CoV-2","AAAACTCCTTAAAGCA",2,17.65,10.9,0.06,0.09,2.84,1.13,0,"1 nonsynonymous","F160K",1
"lib2","SARS-CoV-2","AAAACTCGTATGAAAG",4,88.08,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y123N C158K",2
"lib2","SARS-CoV-2","AAAACTCGTCGCCGAC",10,61.59,6,-4.84,1.81,1.5,1.18,0.02,">1 nonsynonymous","G83L Y93F G155Y",3
"lib2","SARS-CoV-2","AAAACTCTAATACCGC",1,93.82,10.24,-0.59,0.06,2.72,1.02,0,">1 nonsynonymous","E76T Q168A L188D",3
"lib2","SARS-CoV-2","AAAACTCTACGCGAGA",8,14.49,9.49,-1.35,0.2,1.89,1.01,0.01,">1 nonsynonymous","A33D Y91N",2
"lib2","SARS-CoV-2","AAAACTCTAGTCACGG",1,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H F99H",2
"lib2","SARS-CoV-2","AAAACTCTATTGGCAA",5,95.32,8.46,-2.38,0.12,2.9,1.08,0.01,"1 nonsynonymous","T170I",1
"lib2","SARS-CoV-2","AAAACTCTCAGCGGGC",6,100.1,6,-4.84,1.23,1.5,1.25,0.02,">1 nonsynonymous","F17L I104C N120S",3
"lib2","SARS-CoV-2","AAAACTCTGGTTCGGC",1,6.01,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I2M C31L N58R D68M Q168S",5
"lib2","SARS-CoV-2","AAAACTCTTAGCCTAG",11,97.26,9.79,-1.04,0.07,2.38,1.08,0,">1 nonsynonymous","P7L F134M A145S",3
"lib2","SARS-CoV-2","AAAACTGAAATAAACT",8,149.13,10.81,-0.02,0.03,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTGAAATTGATG",2,11.94,6,-4.84,2,3,1.17,0.03,">1 nonsynonymous","F62L S113T P177C",3
"lib2","SARS-CoV-2","AAAACTGAACATAAAA",1,12.39,10.76,-0.08,0.05,3,1,0,"1 nonsynonymous","R16G",1
"lib2","SARS-CoV-2","AAAACTGAATCAGAAG",12,91.41,6.27,-4.57,0.88,1.5,1.23,0.04,">1 nonsynonymous","D97N P161R L187S",3
"lib2","SARS-CoV-2","AAAACTGAATCATTCA",4,0.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135V",1
"lib2","SARS-CoV-2","AAAACTGAGCCTTTAT",6,90.66,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C6F W23D Y35A N64K T100F S113E Y119D T201H",8
"lib2","SARS-CoV-2","AAAACTGCAGATAATA",3,12.95,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","K128N C158N V181F",3
"lib2","SARS-CoV-2","AAAACTGCCAAGCCCA",4,24.16,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R27V C61G Y93F Y119F F167Q",5
"lib2","SARS-CoV-2","AAAACTGCCATATATG",3,58.74,10.81,-0.03,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTGCGAAGACTA",13,71.83,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F70I I80M",2
"lib2","SARS-CoV-2","AAAACTGCTACGAGAC",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I G51K N58D N120V S139I F156T",6
"lib2","SARS-CoV-2","AAAACTGCTAGTACTC",1,0.23,NA,NA,NA,NA,NA,NA,"stop","L38P T85K K94*",3
"lib2","SARS-CoV-2","AAAACTGCTATTCAAT",2,18.98,8.83,-2,0.08,2.51,1.05,0,"1 nonsynonymous","Y165V",1
"lib2","SARS-CoV-2","AAAACTGCTGACTCAT",1,18.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6L P82F A89H Y178G",4
"lib2","SARS-CoV-2","AAAACTGCTGATTATT",7,44.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L G51F I72P T85N F99T Y175I",6
"lib2","SARS-CoV-2","AAAACTGGACGCAAAA",22,331.84,9.6,-1.23,0.06,1.93,1.05,0,">1 nonsynonymous","E10K V20C K48R D59N",4
"lib2","SARS-CoV-2","AAAACTGGCGGTCGTT",4,63.38,10.73,-0.11,0.05,2.95,1.02,0,">1 nonsynonymous","D98G K114I S147N V173I",4
"lib2","SARS-CoV-2","AAAACTGTAAGTATCC",1,56.78,10.34,-0.5,0.06,2.93,1.08,0,">1 nonsynonymous","E10S S41E N58S",3
"lib2","SARS-CoV-2","AAAACTGTGTAACTTG",2,47.44,10.07,-0.76,0.04,2.79,1.05,0,">1 nonsynonymous","D34T S53F T201V",3
"lib2","SARS-CoV-2","AAAACTGTTGATGACT",1,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M A42S Y119L E186L",4
"lib2","SARS-CoV-2","AAAACTGTTGGAAAAA",6,43.81,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A18L S41L Y91R",3
"lib2","SARS-CoV-2","AAAACTTAAAGTATAA",2,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P V173L R179N",3
"lib2","SARS-CoV-2","AAAACTTAAATCAGTA",8,165.66,10.93,0.1,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAACTTAACGTAGTA",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H I88N R127P N151Y",4
"lib2","SARS-CoV-2","AAAACTTAACGTTATA",12,207.13,8.85,-1.99,0.05,2.94,1.09,0,">1 nonsynonymous","T170V H189S",2
"lib2","SARS-CoV-2","AAAACTTAGCGTTAAA",6,94.88,10.61,-0.23,0.03,2.98,1.02,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","AAAACTTAGTCTCGAC",4,77.07,8.3,-2.54,0.14,2.27,1.15,0.01,">1 nonsynonymous","K48T N157Y",2
"lib2","SARS-CoV-2","AAAACTTATCTATATT",2,17.54,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S43F L57K D90R F99S G146V G152M",6
"lib2","SARS-CoV-2","AAAACTTATTCACTCA",3,70.52,10.81,-0.03,0.07,2.92,1.08,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","AAAACTTCAAAACAGC",10,156.04,8.54,-2.3,0.1,2.91,1.07,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","AAAACTTCGAAAAAGC",17,191.6,8.94,-1.9,0.05,2.89,1.09,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","AAAACTTCTAAATCAT",5,118.55,10.12,-0.72,0.05,2.96,1.02,0,">1 nonsynonymous","L60H L125S",2
"lib2","SARS-CoV-2","AAAACTTCTTCATCTA",13,103.06,6,-4.84,1.52,3,1.15,0,">1 nonsynonymous","E10L N24P Y50N L95R G174N",5
"lib2","SARS-CoV-2","AAAACTTGAATATCAA",13,195.21,10.81,-0.02,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTTTATCGAACT",7,0.9,NA,NA,NA,NA,NA,NA,"stop","F44D F47L A89K W106* L162W T201C",6
"lib2","SARS-CoV-2","AAAACTTTGCGAAGTA",8,81.22,10.05,-0.78,0.04,2.99,1,0,">1 nonsynonymous","L122K G166S G174A",3
"lib2","SARS-CoV-2","AAAACTTTGTCCTACA",1,22.28,10.88,0.05,0.09,2.86,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAACTTTTACTTCCG",13,1.42,NA,NA,NA,NA,NA,NA,"stop","A42T P82* G117K S139V C158P",5
"lib2","SARS-CoV-2","AAAACTTTTATGCGTC",5,118.47,10.59,-0.24,0.02,2.98,1.03,0,"1 nonsynonymous","G9I",1
"lib2","SARS-CoV-2","AAAACTTTTATGCTCA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","G51* V103N I142A N157P F167Q",5
"lib2","SARS-CoV-2","AAAAGAAAAAATTGCC",8,28.35,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S41L T55P F99H S113T Y143T V182F",6
"lib2","SARS-CoV-2","AAAAGAAAACACAACG",3,5.22,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","N1T G9T P133F G155A L162W",5
"lib2","SARS-CoV-2","AAAAGAAAAGCTTTTG",24,40.85,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","S113H F156K V180D",3
"lib2","SARS-CoV-2","AAAAGAAACAAAAACA",10,146.86,10.27,-0.57,0.04,2.83,1.03,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","AAAAGAAACTACGTTT",4,84,10.76,-0.07,0.05,2.98,1.05,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","AAAAGAAAGACAGCAA",2,85.58,9.52,-1.32,0.07,2.15,1.11,0,">1 nonsynonymous","L5D K48L K128E P161S",4
"lib2","SARS-CoV-2","AAAAGAAAGAGAGGAT",4,24.79,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S45D F99M G117T I138R",4
"lib2","SARS-CoV-2","AAAAGAAATAGCTATA",1,56.48,10.77,-0.07,0.03,3,1.03,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","AAAAGAAATATGGATA",4,64.77,10.92,0.08,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGAAATCAACTCT",6,87.6,9.65,-1.19,0.1,2.03,1.05,0,">1 nonsynonymous","L5P Y91L K94L P197L",4
"lib2","SARS-CoV-2","AAAAGAAATCGATTAC",3,129.03,10.8,-0.04,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGAAATTGACCCA",9,39.2,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y50E Q79L T100E",3
"lib2","SARS-CoV-2","AAAAGAACAAACTTAA",1,27.92,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6S V37R L95A",3
"lib2","SARS-CoV-2","AAAAGAACAAGAGACA",11,64.04,10.18,-0.66,0.08,2.55,1.04,0,">1 nonsynonymous","Y91R P191Q",2
"lib2","SARS-CoV-2","AAAAGAACACGGTGCC",2,54.97,10.25,-0.59,0.03,3,1,0,">1 nonsynonymous","F12V L60Y K87A",3
"lib2","SARS-CoV-2","AAAAGAACCCGCCGAA",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K114T",2
"lib2","SARS-CoV-2","AAAAGAACGCACCCAT",2,36.46,10.8,-0.04,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGAACTTATGAAT",11,197.72,10.74,-0.1,0.03,2.89,1.1,0,"1 nonsynonymous","G83Y",1
"lib2","SARS-CoV-2","AAAAGAAGAAAGCAAG",4,8.49,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V32I V103T F126S F167S",4
"lib2","SARS-CoV-2","AAAAGAAGAAAGTAAG",4,5.08,7.57,-3.26,0.19,2.3,1,0.01,">1 nonsynonymous","F134M Y165V",2
"lib2","SARS-CoV-2","AAAAGAAGAATACCCA",6,48.78,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P54W G117M L162D H189R",4
"lib2","SARS-CoV-2","AAAAGAAGACTGTATC",1,10.31,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y35A V77L C158H F167A G174P",5
"lib2","SARS-CoV-2","AAAAGAAGAGAACAAA",1,16.92,10.81,-0.02,0.12,2.95,1.06,0.01,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","AAAAGAAGCACAGAGG",2,18.18,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F70V N107V L131R F160L",4
"lib2","SARS-CoV-2","AAAAGAAGCCTGCGTT",5,89.34,10.12,-0.72,0.03,2.89,1.08,0,">1 nonsynonymous","A81N K87I",2
"lib2","SARS-CoV-2","AAAAGAAGTAAACGCT",10,31.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G83V P149R F167Q",3
"lib2","SARS-CoV-2","AAAAGAAGTCCGTAAT",5,53.81,9.81,-1.03,0.11,2.7,1.01,0.01,">1 nonsynonymous","C31E T63G Q84E S129K",4
"lib2","SARS-CoV-2","AAAAGAATAAGGACGC",11,104.9,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N1T I88D D98M",3
"lib2","SARS-CoV-2","AAAAGAATACCCAATA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","S36* G51W N64T",3
"lib2","SARS-CoV-2","AAAAGAATAGAACTAA",5,33,9.41,-1.42,0.06,2.58,1.09,0,">1 nonsynonymous","T55Y D97S N120Q G146Y",4
"lib2","SARS-CoV-2","AAAAGAATATCACATA",9,197.51,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C6M F160G V173E Q176L",4
"lib2","SARS-CoV-2","AAAAGAATCAATACCT",7,24.21,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S43V G86S D90K F99G N107G",5
"lib2","SARS-CoV-2","AAAAGAATGTAAACGA",3,26.45,6.13,-4.71,1.27,1.5,1.21,0.05,">1 nonsynonymous","N1M C61Y K94I K114G",4
"lib2","SARS-CoV-2","AAAAGAATTTAGGGAA",6,0.54,NA,NA,NA,NA,NA,NA,"stop","S41I S53C F62* D137Y P149R",5
"lib2","SARS-CoV-2","AAAAGACAAACAGAGA",5,21.8,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","Y93R F185T",2
"lib2","SARS-CoV-2","AAAAGACACTGTTTGA",1,18.59,8.6,-2.23,0.11,2.99,1.12,0,">1 nonsynonymous","G117Y I138V G166F",3
"lib2","SARS-CoV-2","AAAAGACAGATTGAAA",3,61.22,9.83,-1,0.06,2.24,1,0,">1 nonsynonymous","F47L F62R S184H T201V",4
"lib2","SARS-CoV-2","AAAAGACAGCTATTAA",7,13.89,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","K48Y A89L L122C E186M",4
"lib2","SARS-CoV-2","AAAAGACAGTGAGATG",2,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T G86H",2
"lib2","SARS-CoV-2","AAAAGACATCCCTCAT",12,187.92,10.82,-0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGACATGGAGACA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","W23T D34L G83V D97* A105H R124W",6
"lib2","SARS-CoV-2","AAAAGACCGCCTACTT",5,223.01,9.91,-0.93,0.04,2.6,1.05,0,">1 nonsynonymous","C61V E141N P149S Y178A",4
"lib2","SARS-CoV-2","AAAAGACCTTCCGAAC",7,62.07,9.66,-1.18,0.13,1.84,1.07,0.01,">1 nonsynonymous","V32E A89N",2
"lib2","SARS-CoV-2","AAAAGACCTTGATAGA",1,18.31,10.2,-0.63,0.08,2.94,1,0,">1 nonsynonymous","L60N Q84R",2
"lib2","SARS-CoV-2","AAAAGACGACGAATAT",4,7.24,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C6I G86C",2
"lib2","SARS-CoV-2","AAAAGACGCCCAACCA",3,26.95,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G9R N58R G83S L95R V103I Q168I",6
"lib2","SARS-CoV-2","AAAAGACGCGACCCAA",7,88.93,10.75,-0.08,0.03,2.99,1,0,">1 nonsynonymous","L5S N171S",2
"lib2","SARS-CoV-2","AAAAGACGTATTGTCA",6,60.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q84L N107D Y119T",3
"lib2","SARS-CoV-2","AAAAGACGTTAATAAA",3,26.93,10.8,-0.04,0.06,3,1.03,0,">1 nonsynonymous","G9W T201C",2
"lib2","SARS-CoV-2","AAAAGACTAGCATTTT",6,119.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F70M G86T Y121I P177C S184C T201V",6
"lib2","SARS-CoV-2","AAAAGACTCAGCAACT",5,61.47,10.71,-0.12,0.06,2.88,1.15,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","AAAAGACTTAACTCCC",3,13.09,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19T K87E C102S P133L",4
"lib2","SARS-CoV-2","AAAAGACTTATAAGTA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G P169M",2
"lib2","SARS-CoV-2","AAAAGAGAAAAACCCG",18,4.74,NA,NA,NA,NA,NA,NA,"stop","Y121V R127*",2
"lib2","SARS-CoV-2","AAAAGAGAACGCTGAT",6,1.06,NA,NA,NA,NA,NA,NA,"stop","N120* C150G",2
"lib2","SARS-CoV-2","AAAAGAGAAGATAGAT",2,104.38,10.85,0.01,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGAGAATCGCTTT",5,115.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4V S36L L57P P96T G117Y",5
"lib2","SARS-CoV-2","AAAAGAGACCCTCCTA",7,7.36,NA,NA,NA,NA,NA,NA,"stop","I142* N151F L162C",3
"lib2","SARS-CoV-2","AAAAGAGACGTGCACC",1,26.98,6,-4.84,2,3,1.21,0,">1 nonsynonymous","I2F N40Y Y50N G116K",4
"lib2","SARS-CoV-2","AAAAGAGACTAGCCTT",4,76.36,10.65,-0.18,0.04,3,1.03,0,">1 nonsynonymous","S29R G152S",2
"lib2","SARS-CoV-2","AAAAGAGAGCTTGGGA",8,76.77,9.5,-1.34,0.09,2.16,1.03,0,">1 nonsynonymous","F8A R16S V37M R136Q",4
"lib2","SARS-CoV-2","AAAAGAGAGTTGCGCT",1,45.67,10.25,-0.58,0.05,3,1.03,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AAAAGAGATCACATGA",10,68.38,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N40H T63S C102T Y121I S200M",5
"lib2","SARS-CoV-2","AAAAGAGATTATATTC",2,26.53,10.75,-0.08,0.1,2.92,1.11,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","AAAAGAGATTTCCTCG",5,2.33,NA,NA,NA,NA,NA,NA,"stop","S36F S45* K56H T85P G174T",5
"lib2","SARS-CoV-2","AAAAGAGCAACAAAGC",3,29.73,7.68,-3.16,0.35,1.5,1.05,0.05,">1 nonsynonymous","Y50I N151K N157A",3
"lib2","SARS-CoV-2","AAAAGAGCATCCACTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K E141D",2
"lib2","SARS-CoV-2","AAAAGAGCGCTAAAAA",6,22.26,6,-4.84,0.93,3,1.1,0,">1 nonsynonymous","G9D N30L I80W F99V",4
"lib2","SARS-CoV-2","AAAAGAGCTCCCAACC",3,50.2,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T63L D90N D112W L125P N151K Q168T V173L",7
"lib2","SARS-CoV-2","AAAAGAGGCAGAATGA",14,122.66,6,-4.84,2,3,1.2,0,">1 nonsynonymous","F17V L38I Y93K D137F",4
"lib2","SARS-CoV-2","AAAAGAGTACCCCTCT",17,142.54,10.81,-0.03,0.05,2.85,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAGAGTACGATATA",9,279.5,8.15,-2.69,0.12,1.96,1.06,0.01,">1 nonsynonymous","V37S T140W Q176S",3
"lib2","SARS-CoV-2","AAAAGAGTCCCCTGAG",5,14,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G9I G83E D112V P149F P191K",5
"lib2","SARS-CoV-2","AAAAGAGTCCCGAAAT",1,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169Q",1
"lib2","SARS-CoV-2","AAAAGAGTCTGGTTCT",1,0.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AAAAGAGTGAAGAAGT",1,24.88,10.71,-0.13,0.06,3,1.02,0,">1 nonsynonymous","T63N Q144S S200K",3
"lib2","SARS-CoV-2","AAAAGAGTGCCACTTA",2,11.61,6.06,-4.78,0.49,3,1.07,0.01,">1 nonsynonymous","N4Y N64I I88E",3
"lib2","SARS-CoV-2","AAAAGAGTGTTACGGG",6,22.94,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","Y50E A105N",2
"lib2","SARS-CoV-2","AAAAGAGTTGCTTCAT",14,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y V71I P177V",3
"lib2","SARS-CoV-2","AAAAGATAATAATCCA",18,6.53,NA,NA,NA,NA,NA,NA,"stop","L38I T55R V103T S113* N130F",5
"lib2","SARS-CoV-2","AAAAGATACAAAGTGT",6,159.84,10.86,0.03,0.05,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAGATACCACACGA",2,46.37,8.55,-2.29,0.32,1.5,1,0.04,">1 nonsynonymous","S45Y T55P N64L P133S",4
"lib2","SARS-CoV-2","AAAAGATACCGTAACC",5,66.12,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S36V D90R Y165K",3
"lib2","SARS-CoV-2","AAAAGATATACACGTT",4,10.13,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","S41V C102P E141R",3
"lib2","SARS-CoV-2","AAAAGATATATAGAAA",4,11.46,9.94,-0.9,0.53,1.5,1,0.07,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","AAAAGATATCACTAGT",2,15.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9R K26R G101H G117P V180A",5
"lib2","SARS-CoV-2","AAAAGATATTAAAACC",3,12.07,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K114A V181Q",2
"lib2","SARS-CoV-2","AAAAGATGAAATTTAA",1,7.18,9.81,-1.02,0.17,2.51,1.12,0.01,">1 nonsynonymous","A22F K87H E141C",3
"lib2","SARS-CoV-2","AAAAGATGAAGTAGCT",8,110.33,10.76,-0.08,0.04,2.94,1.07,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","AAAAGATGCCAAAACA",8,77.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A22P F134R T140M",3
"lib2","SARS-CoV-2","AAAAGATGTTGTAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R K56A",2
"lib2","SARS-CoV-2","AAAAGATTACCGCCCC",1,9.87,9.65,-1.19,0.29,2.13,1.45,0.05,">1 nonsynonymous","R136T V173N",2
"lib2","SARS-CoV-2","AAAAGATTATGGATCC",11,1.67,NA,NA,NA,NA,NA,NA,"stop","R73*",1
"lib2","SARS-CoV-2","AAAAGATTTAATGTGT",2,0,NA,NA,NA,NA,NA,NA,"stop","W23Q D34A G83P G146* K198E",5
"lib2","SARS-CoV-2","AAAAGATTTACAAGGG",4,72.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K26R Y39L L57K K128Y D137Y Y143K",6
"lib2","SARS-CoV-2","AAAAGATTTTAACCCG",9,182.69,10.69,-0.14,0.03,2.98,1.04,0,">1 nonsynonymous","Y39Q D97F",2
"lib2","SARS-CoV-2","AAAAGCAAACGTCCAG",8,80.05,10.75,-0.09,0.04,2.89,1.13,0,"1 nonsynonymous","I138N",1
"lib2","SARS-CoV-2","AAAAGCAAATCAATGA",17,23.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6I C49D V103G L122H E154Y F160D",6
"lib2","SARS-CoV-2","AAAAGCAACATTTTCC",1,8.56,6.07,-4.76,1.66,1.5,1.3,0.05,">1 nonsynonymous","F17T F44A D68T",3
"lib2","SARS-CoV-2","AAAAGCAAGAGTTCTA",6,31.33,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A14V C61S D98G W106V A145W",5
"lib2","SARS-CoV-2","AAAAGCAAGGTGTTTG",1,15.7,9.99,-0.85,0.16,2.59,1.01,0.01,">1 nonsynonymous","L5N E135M S147F",3
"lib2","SARS-CoV-2","AAAAGCAATGCGACAT",5,45.08,9.89,-0.95,0.1,1.83,1.12,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","AAAAGCACAAATGAAA",4,27.86,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","P82F G116P S147N",3
"lib2","SARS-CoV-2","AAAAGCACAACTTAAA",5,70.17,10.83,-0.01,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGCACATGTTCAT",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R A42F D98K L125F E135K",5
"lib2","SARS-CoV-2","AAAAGCACATTAAGAA",4,69.27,10.79,-0.04,0.06,2.83,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAGCACCAATGGAT",1,14.06,6.13,-4.71,1.39,1.51,1.08,0.03,">1 nonsynonymous","F47G K87R N120L T140R",4
"lib2","SARS-CoV-2","AAAAGCACGCTACCAG",4,65.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S45Y F167T",2
"lib2","SARS-CoV-2","AAAAGCACTGTCAGCT",20,185.85,6,-4.84,1.38,1.5,1.18,0.01,">1 nonsynonymous","N4V R16N Y50K E141T T201I",5
"lib2","SARS-CoV-2","AAAAGCAGAAATAACG",5,7.1,8.88,-1.96,0.29,1.64,1.09,0.03,">1 nonsynonymous","V37L A42L L95T T140L",4
"lib2","SARS-CoV-2","AAAAGCAGAATAAAAA",1,8.04,6,-4.84,2,3,1.36,0.02,">1 nonsynonymous","T15L Y50C K56T P96T G174N G196W",6
"lib2","SARS-CoV-2","AAAAGCAGATGCGACT",3,27.33,10.78,-0.06,0.09,2.9,1.06,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","AAAAGCAGCACATTAG",8,24.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R A105Y",2
"lib2","SARS-CoV-2","AAAAGCAGGTCCAGCA",2,47.26,10.93,0.09,0.04,2.97,1.03,0,"1 nonsynonymous","T15S",1
"lib2","SARS-CoV-2","AAAAGCATACACTTAT",2,31.65,9.79,-1.05,0.09,2.78,1.14,0,">1 nonsynonymous","L5F T15K P169V",3
"lib2","SARS-CoV-2","AAAAGCATACAGATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N92F D97S K114P S129* G146E T201Y",6
"lib2","SARS-CoV-2","AAAAGCATTAACCACT",2,8.94,6.13,-4.71,0.69,1.5,1.03,0.02,">1 nonsynonymous","D90A L131W",2
"lib2","SARS-CoV-2","AAAAGCATTAGTTTCA",6,88.32,10.63,-0.2,0.06,2.8,1.12,0,">1 nonsynonymous","D97Y S200D",2
"lib2","SARS-CoV-2","AAAAGCCACTACGTTA",1,6.78,10.62,-0.21,0.13,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGCCACTTTACAA",12,112.57,10.72,-0.12,0.03,2.88,1.12,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","AAAAGCCATCGACACA",5,11.35,8.94,-1.9,0.22,2.67,1.07,0.01,">1 nonsynonymous","G152V G174W",2
"lib2","SARS-CoV-2","AAAAGCCATCGCCATA",6,117.48,10.72,-0.12,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGCCATTAAATTG",10,100.36,10.83,-0.01,0.03,2.89,1.1,0,"1 nonsynonymous","L5A",1
"lib2","SARS-CoV-2","AAAAGCCATTGACATC",20,309.39,10.67,-0.17,0.03,2.93,1.05,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","AAAAGCCCAATACGAC",1,13.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36A L60T P82A",3
"lib2","SARS-CoV-2","AAAAGCCCACGGTGTA",7,61.56,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F62M Y93L V103Y",3
"lib2","SARS-CoV-2","AAAAGCCCACTCGTAG",8,118.87,9.74,-1.1,0.07,2.52,1.05,0,">1 nonsynonymous","R27Q Q84L I142F",3
"lib2","SARS-CoV-2","AAAAGCCCGCAGTATG",4,6.82,10.14,-0.7,0.1,2.9,1.01,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","AAAAGCCCTCAGAGGA",9,141.89,6.38,-4.45,0.29,1.5,1.14,0.01,">1 nonsynonymous","Y21W F134P",2
"lib2","SARS-CoV-2","AAAAGCCCTTGCCAAC",10,20.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A81G F99R G116L",3
"lib2","SARS-CoV-2","AAAAGCCGAATACTTT",8,55.13,10.78,-0.06,0.05,2.88,1.13,0,">1 nonsynonymous","R16T S139Q",2
"lib2","SARS-CoV-2","AAAAGCCGAATTAGAC",4,4.64,NA,NA,NA,NA,NA,NA,"stop","I88T C158* T201K",3
"lib2","SARS-CoV-2","AAAAGCCGACCGCCAT",3,58.83,10.8,-0.03,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGCCGGCTGATAA",5,34.11,8.8,-2.04,0.11,2.42,1.07,0.01,">1 nonsynonymous","N1M N24V F126H F160D",4
"lib2","SARS-CoV-2","AAAAGCCGTCGTTAAA",3,27.63,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","V71K W106K G155H",3
"lib2","SARS-CoV-2","AAAAGCCGTGGGCGAA",4,91.06,9.33,-1.5,0.03,2.96,1.07,0,">1 nonsynonymous","Y35F G117R",2
"lib2","SARS-CoV-2","AAAAGCCTAATTATGC",4,0,NA,NA,NA,NA,NA,NA,"stop","K56M L60* E76P",3
"lib2","SARS-CoV-2","AAAAGCCTTGAACCAT",10,55.23,6.16,-4.68,0.51,1.5,1.2,0.01,">1 nonsynonymous","A89S A105D",2
"lib2","SARS-CoV-2","AAAAGCGAACAAACTT",10,282.34,10.67,-0.17,0.02,2.97,1.03,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","AAAAGCGACCACTTAA",14,191.09,10.74,-0.09,0.04,2.91,1.06,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","AAAAGCGACTAATCAA",1,20.31,8.87,-1.97,0.16,2.02,1.18,0.01,">1 nonsynonymous","V77F F156L",2
"lib2","SARS-CoV-2","AAAAGCGCCACCAGCA",1,18.13,10.9,0.06,0.09,2.97,1.04,0,">1 nonsynonymous","N64Y K199P",2
"lib2","SARS-CoV-2","AAAAGCGCCATATACT",4,56.97,10.23,-0.61,0.04,2.76,1.01,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","AAAAGCGCTTCTGGAT",5,57.67,9.65,-1.19,0.11,1.93,1,0.01,"1 nonsynonymous","R136P",1
"lib2","SARS-CoV-2","AAAAGCGCTTGTCATA",8,16.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42S D112K K128Q R136M",4
"lib2","SARS-CoV-2","AAAAGCTAAGCTCTCG",1,3.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158G",1
"lib2","SARS-CoV-2","AAAAGCTAATGGATTC",7,43.02,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","F70M T148Q P161L",3
"lib2","SARS-CoV-2","AAAAGCTACTAGAGAG",1,1.19,NA,NA,NA,NA,NA,NA,"stop","T15H F134*",2
"lib2","SARS-CoV-2","AAAAGCTAGTATATTA",1,57.94,8.84,-1.99,0.2,1.5,1.03,0.02,">1 nonsynonymous","C6L V173S",2
"lib2","SARS-CoV-2","AAAAGCTAGTTTGTAG",3,31.02,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V71P R136L",2
"lib2","SARS-CoV-2","AAAAGCTATACGAGTC",25,242.39,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y50L A105H G116A",3
"lib2","SARS-CoV-2","AAAAGCTGAAGCCGAA",11,162.55,10.08,-0.76,0.06,2.89,1.03,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","AAAAGCTGATGAAACA",5,9.26,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L5F F12V D90N Y121Q G155C E186S",6
"lib2","SARS-CoV-2","AAAAGCTGGAGAATAG",2,20.82,6,-4.84,2,1.5,1.39,0.06,">1 nonsynonymous","A89G Y93V F99P Y119R",4
"lib2","SARS-CoV-2","AAAAGCTGGCACACAA",15,6.19,NA,NA,NA,NA,NA,NA,"stop","A22R D97R A105F P149*",4
"lib2","SARS-CoV-2","AAAAGCTTACACTTGT",9,125.92,10.88,0.04,0.06,2.86,1.12,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","AAAAGCTTCGTGCTAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M S41L V52C V103S",4
"lib2","SARS-CoV-2","AAAAGCTTGACTCAAT",2,64.66,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V77C N107A Q163K T170P",4
"lib2","SARS-CoV-2","AAAAGCTTTACCAATA",13,124.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25T V32F L38K A67S P177M",5
"lib2","SARS-CoV-2","AAAAGGAAATAGAGAT",2,3.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183W",1
"lib2","SARS-CoV-2","AAAAGGAACTTGCAAA",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T L38I",2
"lib2","SARS-CoV-2","AAAAGGAACTTTACAG",4,8.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54S W106P",2
"lib2","SARS-CoV-2","AAAAGGAAGCTCGACT",2,35.88,8.9,-1.94,0.11,2.17,1.08,0.01,">1 nonsynonymous","D90S Y121P",2
"lib2","SARS-CoV-2","AAAAGGAAGGGTGGAC",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M V103L E135D",3
"lib2","SARS-CoV-2","AAAAGGAAGTATTAGA",4,32.99,10.48,-0.36,0.05,2.89,1.11,0,">1 nonsynonymous","E10A N171S",2
"lib2","SARS-CoV-2","AAAAGGAATAATGGAT",1,13.75,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","W23L L57V G86L Y165M G174P",5
"lib2","SARS-CoV-2","AAAAGGAATTGAAAGG",4,76.47,10.51,-0.33,0.06,2.86,1.11,0,">1 nonsynonymous","D97I G155A",2
"lib2","SARS-CoV-2","AAAAGGACATGTCGGT",9,187.38,10.68,-0.16,0.03,2.95,1.06,0,">1 nonsynonymous","S36D G146A Q163T",3
"lib2","SARS-CoV-2","AAAAGGACGATAGACA",1,17.74,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G9L T55V P96H K132V S139R",5
"lib2","SARS-CoV-2","AAAAGGACGGATTGAT",4,50.79,10.06,-0.78,0.05,2.89,1.05,0,"1 nonsynonymous","G155V",1
"lib2","SARS-CoV-2","AAAAGGACTCGGGAAC",9,3.54,NA,NA,NA,NA,NA,NA,"stop","N1* S53G E154G",3
"lib2","SARS-CoV-2","AAAAGGAGAAGTAGGA",1,78.09,10.42,-0.41,0.1,2.62,1.14,0,"1 nonsynonymous","S184M",1
"lib2","SARS-CoV-2","AAAAGGAGAATTTGGC",3,17.75,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S43K I88S P161A S200M",4
"lib2","SARS-CoV-2","AAAAGGAGAGCACCCG",5,112.25,10.88,0.05,0.05,2.94,1.07,0,">1 nonsynonymous","V32M Y39M",2
"lib2","SARS-CoV-2","AAAAGGAGCTAGAGGT",8,158.6,9.21,-1.62,0.05,2.46,1.11,0,">1 nonsynonymous","G74Y Q163G",2
"lib2","SARS-CoV-2","AAAAGGAGGACCAAGG",6,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L V115Q Y121Q",3
"lib2","SARS-CoV-2","AAAAGGAGTACAATCA",4,2.34,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","AAAAGGATAGCCAGAT",3,14.12,8.92,-1.91,0.16,1.96,1.09,0.01,">1 nonsynonymous","V11G G146A",2
"lib2","SARS-CoV-2","AAAAGGATAGGTGGTT",2,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A A18T T46A Y143C",4
"lib2","SARS-CoV-2","AAAAGGATTGCTTTCA",2,62.63,10.67,-0.17,0.05,2.9,1.08,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","AAAAGGATTGGCCACT",13,197.67,10.69,-0.14,0.02,2.98,1.03,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","AAAAGGCAACACTAAA",4,51.93,9.45,-1.39,0.07,1.95,1.06,0,">1 nonsynonymous","T46F L60S G83W G174N",4
"lib2","SARS-CoV-2","AAAAGGCAAGAAGGGT",4,33.08,10.41,-0.43,0.04,3,1.03,0,">1 nonsynonymous","L60W K87I T201M",3
"lib2","SARS-CoV-2","AAAAGGCAATAATTCA",3,59.81,9.96,-0.88,0.08,2.4,1.03,0,">1 nonsynonymous","T55P S139V",2
"lib2","SARS-CoV-2","AAAAGGCACCAGTCTT",2,44.76,6,-4.84,0.72,1.5,1.1,0.01,">1 nonsynonymous","N58R A81K Y93N S139F",4
"lib2","SARS-CoV-2","AAAAGGCATCATCGAA",7,42.39,6.59,-4.25,0.43,1.5,1.15,0.03,">1 nonsynonymous","T85L K128V S139L N151S",4
"lib2","SARS-CoV-2","AAAAGGCATGCACAAC",3,0.61,NA,NA,NA,NA,NA,NA,"stop","V71* D97P K114Q V173A V181P",5
"lib2","SARS-CoV-2","AAAAGGCCTCTGGAAA",5,31.18,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","I2W N13C N110V A145L G152I V173D",6
"lib2","SARS-CoV-2","AAAAGGCGAATTTCAA",4,27.11,10.12,-0.72,0.07,2.7,1.12,0,">1 nonsynonymous","K132G Y178C L188R",3
"lib2","SARS-CoV-2","AAAAGGCGGAAGTTAC",2,5.33,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17V A105Q",2
"lib2","SARS-CoV-2","AAAAGGCGGGATTCAT",6,15.9,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6L G101S V182R",3
"lib2","SARS-CoV-2","AAAAGGCGTTGACATG",1,6.13,7.82,-3.01,0.69,1.76,1,0.04,">1 nonsynonymous","P82L D90Y Y119D G155R L162N",5
"lib2","SARS-CoV-2","AAAAGGCTAACATTAA",1,36.6,10.79,-0.05,0.06,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGGCTGAAGGTAA",8,134.51,10.72,-0.11,0.05,2.93,1.08,0,">1 nonsynonymous","E141S K198W",2
"lib2","SARS-CoV-2","AAAAGGGATATACGTT",23,124.52,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","W23L V77K W106P D112Q Q144S",5
"lib2","SARS-CoV-2","AAAAGGGATGTTGGTA",7,117.67,6.01,-4.82,0.67,1.5,1.17,0.01,">1 nonsynonymous","S113E Y178N",2
"lib2","SARS-CoV-2","AAAAGGGCGATGGGCC",8,57.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2G L57S N92F I104L V115N",5
"lib2","SARS-CoV-2","AAAAGGGGAAACATAG",6,11.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41L C49D K128T A192F",4
"lib2","SARS-CoV-2","AAAAGGGGACACATAT",3,17.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35M S45N P96C V182P T201E",5
"lib2","SARS-CoV-2","AAAAGGGGTAAATATA",3,14.03,6.87,-3.97,0.6,1.5,1.08,0.08,">1 nonsynonymous","C6L C49T I142M F167D",4
"lib2","SARS-CoV-2","AAAAGGGTGAAAATGT",1,17.72,10.61,-0.23,0.08,2.73,1.29,0,"1 nonsynonymous","Q144G",1
"lib2","SARS-CoV-2","AAAAGGGTGCAGCTTG",3,33.74,6.52,-4.31,0.37,1.5,1.15,0.01,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","AAAAGGTAAATGAATA",6,2.15,NA,NA,NA,NA,NA,NA,"stop","N4F P96* G117W",3
"lib2","SARS-CoV-2","AAAAGGTAATAATCCA",2,39.86,10.62,-0.22,0.06,2.91,1.1,0,">1 nonsynonymous","N1G I138A",2
"lib2","SARS-CoV-2","AAAAGGTAATATGACA",4,113.66,9.47,-1.37,0.05,2.02,1.02,0,">1 nonsynonymous","T3W R27N L38P T85S S129D",5
"lib2","SARS-CoV-2","AAAAGGTACGGAAAAA",8,70.62,6.05,-4.79,1.1,1.5,1.16,0.02,">1 nonsynonymous","N30M S43G D98A E141C G155T",5
"lib2","SARS-CoV-2","AAAAGGTAGCTAAACA",1,0.88,NA,NA,NA,NA,NA,NA,"stop","W23* P96F C158Y",3
"lib2","SARS-CoV-2","AAAAGGTAGTAACCAG",1,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123H V180S",2
"lib2","SARS-CoV-2","AAAAGGTATCGAAATA",6,66.86,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R27G S43M I138F T148E P177L",5
"lib2","SARS-CoV-2","AAAAGGTCAAGGCACA",3,37.31,10.63,-0.21,0.06,2.87,1.06,0,"1 nonsynonymous","P7Y",1
"lib2","SARS-CoV-2","AAAAGGTCCTCTATTA",7,90.21,10.66,-0.17,0.03,2.98,1.04,0,">1 nonsynonymous","I2V P7H Y35W E135H",4
"lib2","SARS-CoV-2","AAAAGGTGAATAGGTC",5,39.84,6.43,-4.41,1.01,1.5,1.23,0.07,">1 nonsynonymous","N4F A89G I142H C158R",4
"lib2","SARS-CoV-2","AAAAGGTGCAATTAAC",20,4.38,NA,NA,NA,NA,NA,NA,"stop","S41L C49L C61T P96T D137*",5
"lib2","SARS-CoV-2","AAAAGGTGCGGTACTA",13,2.49,NA,NA,NA,NA,NA,NA,"stop","I2S S36L V77L N107F K132T Y175* H189F",7
"lib2","SARS-CoV-2","AAAAGGTGTACGGTAA",9,111.04,10.79,-0.05,0.02,2.92,1.05,0,">1 nonsynonymous","S29G T201R",2
"lib2","SARS-CoV-2","AAAAGGTTAGAACGTA",9,4.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","AAAAGGTTTCACCAAT",2,20.16,7.59,-3.25,0.19,1.82,1.06,0.01,">1 nonsynonymous","P7Y E141S Q176L",3
"lib2","SARS-CoV-2","AAAAGGTTTCTACGGG",5,43.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16F Y21K T46D N107S",4
"lib2","SARS-CoV-2","AAAAGTAAAAATCACC",1,1.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","AAAAGTAAAATAAACT",7,57.79,6.22,-4.61,0.29,2.2,1.17,0,">1 nonsynonymous","N4G R127T N151L F156Y",4
"lib2","SARS-CoV-2","AAAAGTAAAATACACC",4,48.87,8.6,-2.24,0.06,2.98,1.06,0,">1 nonsynonymous","F62W F126G T140S",3
"lib2","SARS-CoV-2","AAAAGTAAACACAGGA",3,32.05,6.19,-4.65,0.81,1.5,1.17,0.03,">1 nonsynonymous","A22G N40H S45R F62L C158R",5
"lib2","SARS-CoV-2","AAAAGTAAATGAACTT",4,86.79,10.88,0.04,0.07,2.83,1.06,0,"1 nonsynonymous","G196V",1
"lib2","SARS-CoV-2","AAAAGTAAATGACTCG",10,43.49,6.71,-4.13,0.48,1.5,1.24,0.03,">1 nonsynonymous","F12K T100S N110K",3
"lib2","SARS-CoV-2","AAAAGTAAATGCAAAA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","Y35R V71G L122* K128H R136N A145D F160C L183S",8
"lib2","SARS-CoV-2","AAAAGTAACCTTAATT",1,5.87,6.23,-4.6,1.01,1.5,1.14,0.06,">1 nonsynonymous","P54K N92T K128S",3
"lib2","SARS-CoV-2","AAAAGTAAGATGTCAG",5,1.37,NA,NA,NA,NA,NA,NA,"stop","F70K N110*",2
"lib2","SARS-CoV-2","AAAAGTAAGCTGAAAA",2,94.32,10.29,-0.54,0.05,2.74,1.05,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","AAAAGTAAGGGTTAAG",2,1.28,NA,NA,NA,NA,NA,NA,"stop","I28Y V103P Y119L L125P T201*",5
"lib2","SARS-CoV-2","AAAAGTACGTTAAGAA",4,70.02,6,-4.84,2,1.82,1.2,0.01,">1 nonsynonymous","C61L T140S Q176W",3
"lib2","SARS-CoV-2","AAAAGTAGATATTATT",21,2.33,NA,NA,NA,NA,NA,NA,"stop","Y39I K128R P161V Q168* T201L",5
"lib2","SARS-CoV-2","AAAAGTAGGAATTCCG",8,78.94,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V37K D59P Y91I S129P G146L",5
"lib2","SARS-CoV-2","AAAAGTAGGCGAGTTA",2,6.23,9.64,-1.2,0.06,3,1.02,0,">1 nonsynonymous","I142F T148W G174E",3
"lib2","SARS-CoV-2","AAAAGTAGGTAATACC",4,62.93,6.62,-4.21,0.42,1.5,1.15,0.02,">1 nonsynonymous","A42S D59P G86S",3
"lib2","SARS-CoV-2","AAAAGTAGTAATACAC",6,25.05,6.45,-4.38,0.47,1.5,1.21,0.03,">1 nonsynonymous","V11Y I88V S129Y E135R",4
"lib2","SARS-CoV-2","AAAAGTAGTATACTAG",3,25.59,10.66,-0.18,0.07,2.73,1.25,0,"1 nonsynonymous","K48S",1
"lib2","SARS-CoV-2","AAAAGTAGTCTGAGTA",6,18.97,7.17,-3.66,0.25,1.5,1.09,0.02,">1 nonsynonymous","L5R N118D F185R",3
"lib2","SARS-CoV-2","AAAAGTATGAATGAAA",13,43.23,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y91H D112L E141M",3
"lib2","SARS-CoV-2","AAAAGTATGCACCAAC",2,29.98,10.88,0.04,0.07,2.99,1,0,"1 nonsynonymous","P54Q",1
"lib2","SARS-CoV-2","AAAAGTATGCATGGCA",3,5.78,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","K56V G83Y P96W",3
"lib2","SARS-CoV-2","AAAAGTATTGCTACTT",5,39.27,10.77,-0.07,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTATTTACAATG",9,49.29,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A105F D137G T201M",3
"lib2","SARS-CoV-2","AAAAGTCAAACTCCCA",15,130.56,10.8,-0.03,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTCATAGGTAAA",5,91.43,10.81,-0.02,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTCATAGTCCAA",2,64.02,10.9,0.06,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTCATTAACCAA",7,104.8,10.26,-0.58,0.03,2.86,1.03,0,">1 nonsynonymous","Y39D K56R S69T",3
"lib2","SARS-CoV-2","AAAAGTCCAAATGGCT",2,14.92,NA,NA,NA,NA,NA,NA,"stop","T85K S113C N130*",3
"lib2","SARS-CoV-2","AAAAGTCCCCAGCCTA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","P149* F156V",2
"lib2","SARS-CoV-2","AAAAGTCCCGCTAGGC",7,124.73,10.29,-0.54,0.07,2.45,1.05,0,">1 nonsynonymous","L38Y A89S S147P",3
"lib2","SARS-CoV-2","AAAAGTCCCTTAGCAA",3,40.21,6,-4.84,1.97,1.5,1.07,0,">1 nonsynonymous","G9L Y35V G86T Y91C",4
"lib2","SARS-CoV-2","AAAAGTCCGCACTGTT",8,1.89,NA,NA,NA,NA,NA,NA,"stop","R16F E141* G146A",3
"lib2","SARS-CoV-2","AAAAGTCCTTAAAAAA",2,33.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7L F12R D34E S36M N40P I104R",6
"lib2","SARS-CoV-2","AAAAGTCGAACACATT",1,54.98,10.9,0.06,0.07,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAGTCGAGATTAGT",8,31.18,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13P N118K",2
"lib2","SARS-CoV-2","AAAAGTCGCAGGAATG",2,13.91,10.14,-0.7,0.06,3,1,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","AAAAGTCGGGCCAATA",4,53.44,10.6,-0.24,0.05,3,1.02,0,">1 nonsynonymous","N13C L122K",2
"lib2","SARS-CoV-2","AAAAGTCGTTAGACAA",6,15.93,6.67,-4.16,0.28,1.5,1.18,0.01,">1 nonsynonymous","N1R C31S K128R G146Q",4
"lib2","SARS-CoV-2","AAAAGTCTACACTATG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","N120* F160Y P197K",3
"lib2","SARS-CoV-2","AAAAGTCTATGATATT",2,0,NA,NA,NA,NA,NA,NA,"stop","K48L F62M D90*",3
"lib2","SARS-CoV-2","AAAAGTCTCACTTTTT",5,76.33,8.74,-2.09,0.09,2.95,1.04,0,">1 nonsynonymous","S113M P197K",2
"lib2","SARS-CoV-2","AAAAGTCTCATAGACG",9,9.51,10.34,-0.49,0.31,2.37,1.03,0.04,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","AAAAGTCTCTAACCAG",9,150.44,8.27,-2.56,0.11,2.02,1.05,0,">1 nonsynonymous","F62N Q176S",2
"lib2","SARS-CoV-2","AAAAGTCTGAATACAA",1,12.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18Y K26G L95Q",3
"lib2","SARS-CoV-2","AAAAGTCTGGGATGAG",23,108.45,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","AAAAGTCTTGGTGTCA",8,33.55,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S41A N64K D98L D112K",4
"lib2","SARS-CoV-2","AAAAGTGAACTGCGAC",5,1.05,NA,NA,NA,NA,NA,NA,"stop","V32K K48C P82* Y123I N130P G152N F156V Y178F",8
"lib2","SARS-CoV-2","AAAAGTGAAGGCTGGA",2,23.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K N30T S139I P149C",4
"lib2","SARS-CoV-2","AAAAGTGAAGGGATAA",6,0.71,NA,NA,NA,NA,NA,NA,"stop","A14D R25D V71* K114T N120I",5
"lib2","SARS-CoV-2","AAAAGTGACGAGAACT",1,21.41,9.87,-0.97,0.11,2.1,1.04,0,">1 nonsynonymous","N4F L60G Q144D",3
"lib2","SARS-CoV-2","AAAAGTGAGGGATACG",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S F185L",2
"lib2","SARS-CoV-2","AAAAGTGATAAAAAGG",5,83.63,10.34,-0.5,0.07,2.8,1.11,0,">1 nonsynonymous","T85S E186I",2
"lib2","SARS-CoV-2","AAAAGTGCAAACCTGC",18,335.93,10.78,-0.06,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTGCACCTAACA",2,107.7,10.81,-0.03,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTGCAGCTACAT",3,24.63,10.78,-0.05,0.1,2.75,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAAGTGCCACGCCGA",7,54.31,9.06,-1.78,0.13,1.77,1.11,0.01,">1 nonsynonymous","A14P F44D T148V",3
"lib2","SARS-CoV-2","AAAAGTGCCCGATTTC",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R T85H D97L N171Y",4
"lib2","SARS-CoV-2","AAAAGTGGAAGGTAAA",1,20.06,10.08,-0.76,0.12,2.49,1.06,0.01,">1 nonsynonymous","N4I Y91N",2
"lib2","SARS-CoV-2","AAAAGTGGCATGCTAG",13,100.76,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64H L95E",2
"lib2","SARS-CoV-2","AAAAGTGTTAAATGCA",1,33.12,8.97,-1.87,0.1,2.86,1.04,0.01,">1 nonsynonymous","Q163T T170V",2
"lib2","SARS-CoV-2","AAAAGTGTTGCCGAAC",6,177.81,10.15,-0.69,0.04,2.86,1.05,0,">1 nonsynonymous","N30S T55N S184L",3
"lib2","SARS-CoV-2","AAAAGTTAACCCCAAT",10,245.72,8.51,-2.33,0.09,2.94,1.15,0,">1 nonsynonymous","D90N Y119Q G166C",3
"lib2","SARS-CoV-2","AAAAGTTAAGTCGGAT",8,34.55,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L57K D68W K94A T170A",4
"lib2","SARS-CoV-2","AAAAGTTAATAAGTTT",3,50.8,9.12,-1.72,0.05,2.87,1.11,0,">1 nonsynonymous","S41L Y119G",2
"lib2","SARS-CoV-2","AAAAGTTACAGTATGT",7,0.02,NA,NA,NA,NA,NA,NA,"stop","G9R Y35S I138* G146D H189Y",5
"lib2","SARS-CoV-2","AAAAGTTATGAATATA",1,7.71,10.5,-0.33,0.19,2.31,1,0.02,">1 nonsynonymous","A14H G152Y",2
"lib2","SARS-CoV-2","AAAAGTTATTGAGATA",2,27.55,10.69,-0.14,0.04,2.97,1.05,0,">1 nonsynonymous","I2H S43V D97V",3
"lib2","SARS-CoV-2","AAAAGTTCACATACAA",3,119.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18Y P133D G146L",3
"lib2","SARS-CoV-2","AAAAGTTCCTACGTAC",1,39.53,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I88R L188F K199Q",3
"lib2","SARS-CoV-2","AAAAGTTGCAGAGTCA",9,34.76,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N13F G152H V181W L188Y",4
"lib2","SARS-CoV-2","AAAAGTTGTGTCTATC",2,5.52,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I2P C61L I104S Y119L Y143N Q168Y",6
"lib2","SARS-CoV-2","AAAAGTTTAAAACAAC",12,237.24,10.86,0.03,0.04,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAAGTTTACAGGCCT",7,0.35,NA,NA,NA,NA,NA,NA,"stop","L60M V65E D90P N120* R136P T201*",6
"lib2","SARS-CoV-2","AAAAGTTTATTCCTTT",3,34.53,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C49I N64K V181I T201A",4
"lib2","SARS-CoV-2","AAAATAAAAAAATTTA",4,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R L57T S113K E186C",4
"lib2","SARS-CoV-2","AAAATAAAAAGACAGT",3,48.07,10.36,-0.47,0.06,2.8,1.11,0,">1 nonsynonymous","L5M N13S S41P D97Q L122R A190T P197R",7
"lib2","SARS-CoV-2","AAAATAAAACATGCCA",7,72.75,9.15,-1.69,0.22,1.5,1.06,0.02,">1 nonsynonymous","T3W D137C",2
"lib2","SARS-CoV-2","AAAATAAAACCGAAGG",2,1.48,NA,NA,NA,NA,NA,NA,"stop","G9W V20M R27L K56V G83T A145*",6
"lib2","SARS-CoV-2","AAAATAAAACTAGCGG",17,117.7,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","G101H",1
"lib2","SARS-CoV-2","AAAATAAAAGAGGAGC",5,40.16,10.32,-0.51,0.04,2.85,1.13,0,">1 nonsynonymous","L122S P133H",2
"lib2","SARS-CoV-2","AAAATAAAAGGCATTT",6,69.61,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F17R G152I F156L Y159L",4
"lib2","SARS-CoV-2","AAAATAAAATAACGCA",14,199.33,8.63,-2.21,0.05,2.02,1.12,0,">1 nonsynonymous","N107H P149D",2
"lib2","SARS-CoV-2","AAAATAAAATATGATA",8,36.71,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V20G T55Y C61T Y93F D137K N151V V181G",7
"lib2","SARS-CoV-2","AAAATAAAATCCTGAA",3,276.19,10.27,-0.57,0.02,2.81,1.03,0,">1 nonsynonymous","A14S V37E L60S S129H",4
"lib2","SARS-CoV-2","AAAATAAACAAACTAA",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140D Y175E",2
"lib2","SARS-CoV-2","AAAATAAACGAAAGCC",6,56.08,9.87,-0.97,0.16,1.85,1.06,0.01,">1 nonsynonymous","E10S S41I S139V",3
"lib2","SARS-CoV-2","AAAATAAACTAGCCAT",1,60.77,10.69,-0.15,0.03,2.96,1.06,0,">1 nonsynonymous","K128G T201Q",2
"lib2","SARS-CoV-2","AAAATAAAGAATTGCG",5,38.1,9.45,-1.39,0.17,1.57,1.03,0.01,">1 nonsynonymous","P96I F160R",2
"lib2","SARS-CoV-2","AAAATAAAGAGTTATT",5,17.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y91P T100R",2
"lib2","SARS-CoV-2","AAAATAAAGTCAAAGT",7,17.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L95H K132N F185S",3
"lib2","SARS-CoV-2","AAAATAAAGTCAATAC",6,258.33,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L60E T100C K114R I142D T148F T170M",6
"lib2","SARS-CoV-2","AAAATAAATACAACAC",6,21.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D75N V103R",2
"lib2","SARS-CoV-2","AAAATAAATGAATATA",5,30.43,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","T3I I88Y G116Y D137N V153W T170H",6
"lib2","SARS-CoV-2","AAAATAAATTCCGACT",4,0.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H G117F K128G L187P",4
"lib2","SARS-CoV-2","AAAATAAATTTTAAAG",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64K G101Y N130K G166L",4
"lib2","SARS-CoV-2","AAAATAACAAATCTAA",3,15.13,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","T3I W106Y N151P P161G K198V",5
"lib2","SARS-CoV-2","AAAATAACAATTCGGT",2,38.19,9.53,-1.3,0.16,1.83,1.04,0.01,">1 nonsynonymous","L60T Y123T E141S",3
"lib2","SARS-CoV-2","AAAATAACACCCCCAT",6,21.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49Y L60V Q163N",3
"lib2","SARS-CoV-2","AAAATAACACCTATGC",4,3.16,NA,NA,NA,NA,NA,NA,"stop","N64R K114* K128R G146*",4
"lib2","SARS-CoV-2","AAAATAACATAACGAA",9,77.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12P P96R",2
"lib2","SARS-CoV-2","AAAATAACATAAGTAG",5,100.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94S G116P P133N G166F",4
"lib2","SARS-CoV-2","AAAATAACCGAAAAAG",6,43.02,6,-4.84,2,3,1.2,0,">1 nonsynonymous","P96F R124C",2
"lib2","SARS-CoV-2","AAAATAACCGGATATG",7,128.66,8.44,-2.4,0.12,1.5,1.11,0.01,">1 nonsynonymous","I2L L38S L60Q G155S S164P",5
"lib2","SARS-CoV-2","AAAATAACGACAGATG",8,99.64,10.05,-0.78,0.07,2.61,1.15,0,"1 nonsynonymous","Q79R",1
"lib2","SARS-CoV-2","AAAATAACTCCTGTGT",9,204.21,10.65,-0.19,0.03,2.96,1.06,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","AAAATAACTGAACAAA",11,79.03,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V37I F70K Y121S P169Y",4
"lib2","SARS-CoV-2","AAAATAACTGATAGGT",4,16.42,9.94,-0.89,0.07,2.93,1.12,0,">1 nonsynonymous","I28F N118S T148K",3
"lib2","SARS-CoV-2","AAAATAACTGTGCACA",9,211.98,9.99,-0.85,0.06,2.27,1.07,0,">1 nonsynonymous","T55Q P133T P149L",3
"lib2","SARS-CoV-2","AAAATAACTTCCAGAC",2,0.2,NA,NA,NA,NA,NA,NA,"stop","F70*",1
"lib2","SARS-CoV-2","AAAATAAGAGTTAACG",1,23.66,6,-4.84,1.51,3,1.14,0,">1 nonsynonymous","Y91N V103M Y159P",3
"lib2","SARS-CoV-2","AAAATAAGATGGTATG",1,14.63,8.08,-2.76,0.18,1.72,1.03,0.03,">1 nonsynonymous","G9Q G86Q K128P",3
"lib2","SARS-CoV-2","AAAATAAGATTTGTTA",4,38.56,10.28,-0.56,0.04,2.45,1.11,0,">1 nonsynonymous","N1P S41Q C102I",3
"lib2","SARS-CoV-2","AAAATAAGCAGACATG",2,79.28,6,-4.84,0.86,1.5,1.16,0.01,">1 nonsynonymous","N157R G166I",2
"lib2","SARS-CoV-2","AAAATAAGCCAGTATA",2,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121D G146T",2
"lib2","SARS-CoV-2","AAAATAAGCCATACCG",2,14.37,11.02,0.18,0.1,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATAAGCTAGGTCA",5,64.79,8.32,-2.51,0.07,1.65,1.05,0,">1 nonsynonymous","V37K S45V Y121S",3
"lib2","SARS-CoV-2","AAAATAAGCTCAATTT",6,63.05,6.09,-4.74,0.66,1.5,1.11,0.01,">1 nonsynonymous","P82N T85N Y178S",3
"lib2","SARS-CoV-2","AAAATAAGGAAACAGA",4,37.92,9.26,-1.58,0.04,2.99,1.05,0,"1 nonsynonymous","G166R",1
"lib2","SARS-CoV-2","AAAATAAGTGAGGGCA",12,102.72,7.91,-2.92,0.17,1.5,1.12,0.01,">1 nonsynonymous","N40G S45Y A89I A105S",4
"lib2","SARS-CoV-2","AAAATAAGTTCATCAA",1,4.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","AAAATAATAGAAGCCC",6,110.05,10.66,-0.17,0.02,2.96,1.04,0,">1 nonsynonymous","I2P I104L S129C",3
"lib2","SARS-CoV-2","AAAATAATAGAATATA",1,2.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138T",1
"lib2","SARS-CoV-2","AAAATAATAGCGAGTG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G9S V37* K87I T201H",4
"lib2","SARS-CoV-2","AAAATAATATGTATAA",11,127.81,10.59,-0.25,0.04,2.93,1.03,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","AAAATAATATTAGATA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","E10* K48H S69K N107V",4
"lib2","SARS-CoV-2","AAAATAATCAACCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* T55H",2
"lib2","SARS-CoV-2","AAAATAATCAGACGGC",18,169.32,6.58,-4.25,0.37,1.5,1.19,0.02,">1 nonsynonymous","K26F Y119L R127S",3
"lib2","SARS-CoV-2","AAAATAATCTTCAATT",8,57.45,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12I Q84M D90T D137R F156V Q163S T201W",7
"lib2","SARS-CoV-2","AAAATAATGGAAGAGT",1,23.61,10.69,-0.14,0.04,2.99,1.01,0,">1 nonsynonymous","K48Q D59R",2
"lib2","SARS-CoV-2","AAAATAATGTAAAGGA",9,317.56,10.67,-0.17,0.01,2.96,1.05,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","AAAATAATGTTAACGG",4,26.14,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T15S D34G F62M G86H",4
"lib2","SARS-CoV-2","AAAATAATGTTACCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","F8L W23* L60E F160G T170S",5
"lib2","SARS-CoV-2","AAAATAATTATACACT",4,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N V103S",2
"lib2","SARS-CoV-2","AAAATAATTCGAAAAT",3,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D A105P",2
"lib2","SARS-CoV-2","AAAATAATTTATGCGG",5,0.43,NA,NA,NA,NA,NA,NA,"stop","K48Y I72N A81Q V181*",4
"lib2","SARS-CoV-2","AAAATACAAAAAAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N4G N64A K94* V103I T140N",5
"lib2","SARS-CoV-2","AAAATACAAACAATGA",4,33.35,10.6,-0.23,0.09,2.87,1.11,0,">1 nonsynonymous","S41Y T140Y T201S",3
"lib2","SARS-CoV-2","AAAATACAAACATCGG",6,93.07,10.8,-0.03,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACAAAGCTTAA",3,20.87,7.09,-3.75,0.32,2.62,1.05,0.02,">1 nonsynonymous","L38N N107T",2
"lib2","SARS-CoV-2","AAAATACAAAGTGTAA",3,8.9,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I88C I104R Q144G",3
"lib2","SARS-CoV-2","AAAATACAAATACATT",1,7.79,10.82,-0.01,0.17,3,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACAAGCTGCTT",1,31.42,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","P82Y Y123K F156V",3
"lib2","SARS-CoV-2","AAAATACAATATGAAG",5,0.06,NA,NA,NA,NA,NA,NA,"stop","D90V Y123* E186A",3
"lib2","SARS-CoV-2","AAAATACACAACTTTG",1,21,10.92,0.08,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACACATACCGT",8,95.98,10.73,-0.11,0.05,2.9,1.1,0,"1 nonsynonymous","S147L",1
"lib2","SARS-CoV-2","AAAATACACATTATCT",6,1.6,NA,NA,NA,NA,NA,NA,"stop","A33I Y50L D90Y T100R N107A Y121*",6
"lib2","SARS-CoV-2","AAAATACACGTCAGCT",4,68.68,10.86,0.03,0.09,2.85,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACACTTGTATT",2,9.58,10.83,-0.01,0.09,2.83,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACAGCGAGGAA",1,8.43,9.15,-1.69,0.2,2.68,1.09,0.01,">1 nonsynonymous","R27L R78H Y121K",3
"lib2","SARS-CoV-2","AAAATACAGTTATATA",4,0.61,NA,NA,NA,NA,NA,NA,"stop","Y35* T201W",2
"lib2","SARS-CoV-2","AAAATACATAACCCTC",5,72.67,9.91,-0.92,0.09,2.39,1.1,0,">1 nonsynonymous","I88M T100Y",2
"lib2","SARS-CoV-2","AAAATACATAAGCCAA",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D A22L S36R Y50I P161E S200F",6
"lib2","SARS-CoV-2","AAAATACATAGAAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L A81L V103H",3
"lib2","SARS-CoV-2","AAAATACATAGTTCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R L131P",2
"lib2","SARS-CoV-2","AAAATACATATAAACA",6,99.24,8.54,-2.29,0.09,1.99,1.07,0,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","AAAATACATATATTAT",9,29.48,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6M G117V G152I N171F",4
"lib2","SARS-CoV-2","AAAATACATCAATTCT",1,57.52,10.62,-0.22,0.06,2.96,1.05,0,">1 nonsynonymous","K132H P149T",2
"lib2","SARS-CoV-2","AAAATACATCCAATTG",2,10.84,10.4,-0.44,0.08,3,1.03,0,">1 nonsynonymous","A18S F156V",2
"lib2","SARS-CoV-2","AAAATACATGAAACCA",1,32.92,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","F44Y K56F A105G E141P Q176R",5
"lib2","SARS-CoV-2","AAAATACCACCGCAAG",2,58.46,7.02,-3.81,0.36,1.5,1.09,0.03,">1 nonsynonymous","S69E G146T",2
"lib2","SARS-CoV-2","AAAATACCAGAGGGTT",4,27.66,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L60V K87Y K94I T100G",4
"lib2","SARS-CoV-2","AAAATACCAGTGACAA",4,91.2,10.6,-0.23,0.03,3,1.01,0,">1 nonsynonymous","T3S N40P",2
"lib2","SARS-CoV-2","AAAATACCCCCCTAAG",2,1.77,NA,NA,NA,NA,NA,NA,"stop","S19P T63Q Y123A E141K S200*",5
"lib2","SARS-CoV-2","AAAATACCTCCTTCAA",7,103.59,10.81,-0.03,0.06,2.95,1.07,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","AAAATACGAGACCATA",1,14.56,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K94R L95M N130C Y143R C150L",5
"lib2","SARS-CoV-2","AAAATACGCGAAGTTC",4,60.84,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R16F V32R V103D",3
"lib2","SARS-CoV-2","AAAATACGTACTGACC",1,49.61,6,-4.84,1.25,3,1.15,0,">1 nonsynonymous","D90W F167Y P177S",3
"lib2","SARS-CoV-2","AAAATACGTATAATCT",4,31.42,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A18C S69V A105L",3
"lib2","SARS-CoV-2","AAAATACGTTACCCCC",2,45.56,6,-4.84,1.65,2.12,1.29,0.02,">1 nonsynonymous","G9K S19R L60H E76C N120Y F167L Q176L T201Y",8
"lib2","SARS-CoV-2","AAAATACGTTCAGGTG",5,123.97,10.66,-0.18,0.06,2.9,1.06,0,">1 nonsynonymous","S43C D90R",2
"lib2","SARS-CoV-2","AAAATACTAAATAGAG",3,95.92,10.52,-0.31,0.03,2.89,1.09,0,">1 nonsynonymous","S41I S53G",2
"lib2","SARS-CoV-2","AAAATACTAAGTAGTC",5,96.14,9.46,-1.37,0.09,1.91,1.09,0,">1 nonsynonymous","T63D G116Q F134K G196E",4
"lib2","SARS-CoV-2","AAAATACTAGCGCCAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","G86W D98* N130F",3
"lib2","SARS-CoV-2","AAAATACTCCGCTATA",15,255.62,10.84,0,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATACTCGCGCGCT",1,16.47,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T3A F12H V37E P96G V103N V173S",6
"lib2","SARS-CoV-2","AAAATACTGCCGAAAA",3,2.65,NA,NA,NA,NA,NA,NA,"stop","A14S L131T Y159* Y175D",4
"lib2","SARS-CoV-2","AAAATACTGTAGATAA",4,49.15,9.76,-1.08,0.1,1.94,1.02,0,">1 nonsynonymous","T85H V103L",2
"lib2","SARS-CoV-2","AAAATAGAAACATGCA",6,84.52,10.65,-0.19,0.08,2.69,1.1,0,"1 nonsynonymous","T46H",1
"lib2","SARS-CoV-2","AAAATAGAAATGATGA",1,20.23,11.11,0.27,0.07,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATAGAAGTTGATA",8,59.42,6,-4.84,1.57,1.5,1.12,0.02,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","AAAATAGACAAGAAAA",3,33.87,10.36,-0.47,0.05,2.96,1.04,0,">1 nonsynonymous","K56S S129L P191T",3
"lib2","SARS-CoV-2","AAAATAGACTGAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R L122W",2
"lib2","SARS-CoV-2","AAAATAGACTGGCGCC",9,219.56,10.55,-0.28,0.03,2.93,1.04,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","AAAATAGAGAAAAGAA",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V N107S",2
"lib2","SARS-CoV-2","AAAATAGAGTTACATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1I D112M F167L K198*",4
"lib2","SARS-CoV-2","AAAATAGCAATAATGC",7,0.55,NA,NA,NA,NA,NA,NA,"stop","Y66* Q84R",2
"lib2","SARS-CoV-2","AAAATAGCATCTTCGA",3,13.03,8.49,-2.35,0.44,1.5,1,0.06,">1 nonsynonymous","N64G V103L",2
"lib2","SARS-CoV-2","AAAATAGCATTTGTCG",6,68.84,10.22,-0.62,0.03,2.99,1.01,0,">1 nonsynonymous","F44D N120D F156P",3
"lib2","SARS-CoV-2","AAAATAGCCTACCCTT",5,21.86,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V77F S113R",2
"lib2","SARS-CoV-2","AAAATAGCGAATGTGG",3,23.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36N D98L L131E",3
"lib2","SARS-CoV-2","AAAATAGCTAAAGAGC",6,0.79,NA,NA,NA,NA,NA,NA,"stop","N40P F62R Y91T Y165*",4
"lib2","SARS-CoV-2","AAAATAGCTAATAACA",2,41.86,8.34,-2.49,0.11,2.92,1.04,0,">1 nonsynonymous","V37N G166P",2
"lib2","SARS-CoV-2","AAAATAGGACAAATGG",1,11.48,10.83,-0.01,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATAGGCCTTACGG",1,21.55,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G9M D98H N118L N157S",4
"lib2","SARS-CoV-2","AAAATAGGCTGTCATT",17,309.21,10.29,-0.54,0.04,2.81,1.03,0,">1 nonsynonymous","Y39R K56N K94N",3
"lib2","SARS-CoV-2","AAAATAGGGTTTGTCC",13,277.29,8.3,-2.53,0.1,2.55,1.04,0,">1 nonsynonymous","T15D N157L",2
"lib2","SARS-CoV-2","AAAATAGTAACGGACG",6,21.14,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C6N S41R D90C Y119I T201G",5
"lib2","SARS-CoV-2","AAAATAGTACGCATTC",2,1.16,NA,NA,NA,NA,NA,NA,"stop","T3M C61T A105*",3
"lib2","SARS-CoV-2","AAAATAGTAGGAACAG",1,0.6,NA,NA,NA,NA,NA,NA,"stop","L60* E76N",2
"lib2","SARS-CoV-2","AAAATAGTATAAAGTT",11,110.24,10.8,-0.03,0.04,2.97,1.03,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","AAAATAGTCAGCACTT",1,31.13,10.33,-0.5,0.07,2.88,1.1,0,">1 nonsynonymous","D90C N110K P149Q",3
"lib2","SARS-CoV-2","AAAATAGTCCAACAGC",2,12.97,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","P96R Y119S Q168V",3
"lib2","SARS-CoV-2","AAAATAGTCTAACATT",2,34.63,10.89,0.05,0.17,2.75,1.11,0.01,">1 nonsynonymous","V37D K198E",2
"lib2","SARS-CoV-2","AAAATAGTGCTCTTGC",1,14.67,9.22,-1.62,0.42,1.5,1,0.05,">1 nonsynonymous","R27V D68M Q84H L187Q",4
"lib2","SARS-CoV-2","AAAATAGTTGAACCGA",8,1.36,NA,NA,NA,NA,NA,NA,"stop","L5D P149*",2
"lib2","SARS-CoV-2","AAAATAGTTTTTGAAG",2,42.51,6.68,-4.16,0.63,1.5,1.14,0.04,">1 nonsynonymous","D59L W106I Q144T",3
"lib2","SARS-CoV-2","AAAATATAAAGAAATC",2,14.58,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C6F K56A G101S",3
"lib2","SARS-CoV-2","AAAATATAAAGTAACA",5,17.31,6.05,-4.78,1.62,1.5,1.09,0.02,">1 nonsynonymous","N1L S45L C61L P96S",4
"lib2","SARS-CoV-2","AAAATATAATAAATAA",2,18.04,10.89,0.05,0.08,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATATAATCAAAAC",1,12.17,10.8,-0.03,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATATACAGGACAA",4,31.14,6,-4.84,2,3,1.35,0.01,">1 nonsynonymous","Y93I V115T Q144R C150V Q163I",5
"lib2","SARS-CoV-2","AAAATATACCAATAAA",1,31.39,6,-4.84,0.85,1.5,1.09,0.02,">1 nonsynonymous","C6L V37N L125P P169L T201Q",5
"lib2","SARS-CoV-2","AAAATATAGAGCTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* R179N",2
"lib2","SARS-CoV-2","AAAATATAGCCCGAGT",5,33.91,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A81F G86Q Y159D",3
"lib2","SARS-CoV-2","AAAATATATATAGAAT",2,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16H S41T V77L C102M Y121D T148F",6
"lib2","SARS-CoV-2","AAAATATCAAAGTATA",5,3.57,NA,NA,NA,NA,NA,NA,"stop","Y66T D97I E135* Q176R",4
"lib2","SARS-CoV-2","AAAATATCAGCCCGAT",1,5.72,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","Y91L S129R G146K V182S",4
"lib2","SARS-CoV-2","AAAATATCCTATAATT",4,26.49,10.91,0.08,0.07,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATATCTCATAAGG",6,73.34,10.79,-0.04,0.03,2.95,1.05,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","AAAATATCTGGCTACA",10,128.53,10.51,-0.33,0.03,2.89,1.1,0,">1 nonsynonymous","N1Y T46S",2
"lib2","SARS-CoV-2","AAAATATGAACCGAAT",4,71.94,6,-4.84,1.96,1.5,1.16,0.01,">1 nonsynonymous","N4S D68A D90E A145V A190T P197R",6
"lib2","SARS-CoV-2","AAAATATGAATGTGAG",7,12.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N30R S36C N157Y P169H V173P V180C",6
"lib2","SARS-CoV-2","AAAATATGCACAAACG",4,72.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44S N107L D112K L162S",4
"lib2","SARS-CoV-2","AAAATATGGAGAAAAT",6,9.85,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A67P T201R",2
"lib2","SARS-CoV-2","AAAATATGGAGGTAGT",5,79.48,9.15,-1.68,0.08,1.91,1.06,0,">1 nonsynonymous","I2W Y123H F134T N171A T201C",5
"lib2","SARS-CoV-2","AAAATATGGGAGCAAG",1,7.59,NA,NA,NA,NA,NA,NA,"stop","N13* S45L G117Y",3
"lib2","SARS-CoV-2","AAAATATTAACGAGGT",4,29.58,10.7,-0.13,0.05,2.9,1.13,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","AAAATATTAATTTCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99I E135R",2
"lib2","SARS-CoV-2","AAAATATTCTAAGGCA",3,87.35,10.71,-0.13,0.05,2.93,1.07,0,">1 nonsynonymous","T55K D97N V115F",3
"lib2","SARS-CoV-2","AAAATATTGTCACAAT",7,104.62,9.96,-0.87,0.09,2.15,1.03,0,">1 nonsynonymous","F134V T140C",2
"lib2","SARS-CoV-2","AAAATATTTATAGTTT",7,72.06,10.61,-0.22,0.04,2.91,1.06,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","AAAATCAAAAATATCT",2,27.78,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T100S N130M I142K G146T G152K T201S",6
"lib2","SARS-CoV-2","AAAATCAAAACATTAA",1,12.92,10.17,-0.67,0.18,3,1.02,0.01,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","AAAATCAAAAGAATTT",6,44.6,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D112Y Y119S",2
"lib2","SARS-CoV-2","AAAATCAAACCCCGAG",10,72.98,10.13,-0.7,0.06,2.36,1.05,0,">1 nonsynonymous","S45L K132N",2
"lib2","SARS-CoV-2","AAAATCAAACGCGGTG",6,141.75,10.28,-0.56,0.03,2.89,1.06,0,">1 nonsynonymous","F12I C61G",2
"lib2","SARS-CoV-2","AAAATCAAATTAATTT",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T T201L",2
"lib2","SARS-CoV-2","AAAATCAAATTATTTT",3,12.56,10.82,-0.02,0.06,3,1.03,0,"1 nonsynonymous","K56Q",1
"lib2","SARS-CoV-2","AAAATCAAATTTAAAC",10,69.22,9.27,-1.57,0.05,2.55,1.09,0,">1 nonsynonymous","Y35L T55Y K87M D97K N107V L122R T201M",7
"lib2","SARS-CoV-2","AAAATCAACAATTACC",7,2.42,NA,NA,NA,NA,NA,NA,"stop","L38M C61K Q84* K132Y",4
"lib2","SARS-CoV-2","AAAATCAACCCAAGAT",7,60.1,9.88,-0.96,0.07,2.07,1.08,0,">1 nonsynonymous","C6P A33T D97Y",3
"lib2","SARS-CoV-2","AAAATCAACCCGGTTG",1,33.63,10.81,-0.03,0.06,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATCAACGGAAATT",14,284.05,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G152L P177V",2
"lib2","SARS-CoV-2","AAAATCAAGACGGTCT",8,32.55,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A67C L131N T140E V180Q",4
"lib2","SARS-CoV-2","AAAATCAAGACTGGTT",6,13.13,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A42V W106Q I142E",3
"lib2","SARS-CoV-2","AAAATCAAGTCTTACA",2,46.95,10.84,0,0.06,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATCACCCAACAAT",13,138.35,6,-4.84,2,1.5,1.21,0,">1 nonsynonymous","G86Q N107S N118L",3
"lib2","SARS-CoV-2","AAAATCACGATTTCTT",8,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T P96R N118Y",3
"lib2","SARS-CoV-2","AAAATCACGTATGTTA",11,98.25,10.38,-0.45,0.06,2.91,1.1,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","AAAATCAGAGTAGAAT",2,55.3,10.7,-0.14,0.04,2.9,1.1,0,"1 nonsynonymous","R78T",1
"lib2","SARS-CoV-2","AAAATCAGATTGCCAC",2,5.81,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","G86C A105R F134D V173M",4
"lib2","SARS-CoV-2","AAAATCAGCCCACGAA",3,6.79,6.22,-4.62,0.18,3,1.04,0,">1 nonsynonymous","L60S E76I P96L A105S V180E",5
"lib2","SARS-CoV-2","AAAATCAGCCGATTTA",8,1.36,NA,NA,NA,NA,NA,NA,"stop","T55* D75L D97F",3
"lib2","SARS-CoV-2","AAAATCAGGTGAGTTG",5,124.69,8.65,-2.18,0.09,2.99,1.09,0,">1 nonsynonymous","N40H G166Y",2
"lib2","SARS-CoV-2","AAAATCAGTCCTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85E G116A R124C R136* F160M Y175S",6
"lib2","SARS-CoV-2","AAAATCAGTGACAGTA",16,436.79,10.84,0,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATCAGTTTTTGTT",9,0.72,NA,NA,NA,NA,NA,NA,"stop","L5K P54L K56H I142* G155Y",5
"lib2","SARS-CoV-2","AAAATCATAGTGGAGT",2,31.42,10.72,-0.12,0.05,2.92,1.06,0,"1 nonsynonymous","F99W",1
"lib2","SARS-CoV-2","AAAATCATAGTTTATG",6,159.78,10.46,-0.38,0.05,2.95,1.06,0,"1 nonsynonymous","K87C",1
"lib2","SARS-CoV-2","AAAATCATATAAATGC",2,6.27,9.38,-1.45,0.45,1.5,1,0.06,">1 nonsynonymous","Q84M Y93M",2
"lib2","SARS-CoV-2","AAAATCATGATCCACG",2,0,NA,NA,NA,NA,NA,NA,"stop","C49S C61* E76G N107M",4
"lib2","SARS-CoV-2","AAAATCATGCAACGTA",4,9.64,6.3,-4.54,1.3,3,1.06,0.01,">1 nonsynonymous","D34S C61S G83N Y93A",4
"lib2","SARS-CoV-2","AAAATCCAAAACGTAG",9,86.99,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6V K48F A81H Y121L K199N",5
"lib2","SARS-CoV-2","AAAATCCAAGATGTCG",5,21.79,10.61,-0.23,0.03,2.93,1.09,0,">1 nonsynonymous","G9L T100L",2
"lib2","SARS-CoV-2","AAAATCCAATACCCTT",10,138.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R73L G83A D137W",3
"lib2","SARS-CoV-2","AAAATCCACCTTAACA",6,47.36,6.88,-3.95,0.4,1.5,1.2,0.03,">1 nonsynonymous","F62R D68M E141D",3
"lib2","SARS-CoV-2","AAAATCCACTAGTAAA",4,17.84,8.84,-1.99,0.41,1.5,1.02,0.04,">1 nonsynonymous","P7E F44R L183C",3
"lib2","SARS-CoV-2","AAAATCCCAGAAAGCT",4,32.12,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16W S113F Q144M E154S",4
"lib2","SARS-CoV-2","AAAATCCCAGAGAATG",4,27.2,6.99,-3.85,0.19,1.5,1.07,0.01,">1 nonsynonymous","R124S F160N",2
"lib2","SARS-CoV-2","AAAATCCCAGCGACCG",4,21.53,9.87,-0.97,0.15,2.14,1,0.01,">1 nonsynonymous","W106S P149L",2
"lib2","SARS-CoV-2","AAAATCCCATATGGGA",2,68.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L57K G146L P177G S184V K199I",5
"lib2","SARS-CoV-2","AAAATCCCCTTGCTCA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","W23A F44* V115R F160S",4
"lib2","SARS-CoV-2","AAAATCCCGTACAAGT",7,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K D97V N107T",3
"lib2","SARS-CoV-2","AAAATCCGAATAGAGG",11,168.04,8.24,-2.59,0.12,2.31,1.04,0.01,">1 nonsynonymous","R73G D90A",2
"lib2","SARS-CoV-2","AAAATCCGAATGTATT",6,102.77,10.36,-0.48,0.04,2.92,1.05,0,">1 nonsynonymous","A18W A42G",2
"lib2","SARS-CoV-2","AAAATCCGCATATCTT",3,47.87,10.84,0,0.03,2.98,1.03,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","AAAATCCGGCAAGTTA",6,49.05,9.94,-0.89,0.09,2.35,1.04,0,">1 nonsynonymous","F44M D90N K114M N120Y",4
"lib2","SARS-CoV-2","AAAATCCGGGTCTCAG",3,22.63,10.34,-0.5,0.08,3,1.06,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AAAATCCGTATAACAA",1,6.23,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V11L G86C N107S P133R",4
"lib2","SARS-CoV-2","AAAATCCTAGAACTGG",10,133.68,10.75,-0.09,0.04,2.92,1.09,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","AAAATCCTATACTGCC",2,3.99,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAATCCTATTGTACG",5,0.05,NA,NA,NA,NA,NA,NA,"stop","T55* V181Q",2
"lib2","SARS-CoV-2","AAAATCCTCCGCTGCC",9,68.96,9.46,-1.38,0.08,1.98,1.04,0,"1 nonsynonymous","D137H",1
"lib2","SARS-CoV-2","AAAATCGAAAGTCCTT",6,6.45,6.04,-4.79,1,3,1.01,0.03,">1 nonsynonymous","A14V P96Y N110I N157H",4
"lib2","SARS-CoV-2","AAAATCGAATCATATG",8,3.62,NA,NA,NA,NA,NA,NA,"stop","Y35* P54K C61S T148L",4
"lib2","SARS-CoV-2","AAAATCGACCCGTCAT",2,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17C T63Y K87M",3
"lib2","SARS-CoV-2","AAAATCGCCTCTAAAC",2,82.58,8.34,-2.49,0.15,2.58,1.07,0.01,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","AAAATCGCGAGGGATT",9,7.07,NA,NA,NA,NA,NA,NA,"stop","N4T S41* K94F",3
"lib2","SARS-CoV-2","AAAATCGGGACGAGGG",3,35.21,10.25,-0.59,0.08,2.83,1.09,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","AAAATCGGGGAAAATG",1,41.75,10.81,-0.02,0.04,2.97,1.03,0,"1 nonsynonymous","N120H",1
"lib2","SARS-CoV-2","AAAATCGGTGTGGTGA",6,20.48,6,-4.84,2,2.66,1.14,0.01,">1 nonsynonymous","F12K A42G N64L G146P",4
"lib2","SARS-CoV-2","AAAATCGTGTCGAATT",12,47.74,6.12,-4.71,0.95,1.5,1.19,0.02,">1 nonsynonymous","A42V Y50M K56S G146M",4
"lib2","SARS-CoV-2","AAAATCGTTATACACA",5,26.51,10.92,0.09,0.06,2.98,1.05,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","AAAATCGTTCAAGAGG",3,18.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41L S53P G83P",3
"lib2","SARS-CoV-2","AAAATCTAAAAATGAT",11,82.39,10.04,-0.79,0.09,2.28,1.07,0,">1 nonsynonymous","C61S W106R",2
"lib2","SARS-CoV-2","AAAATCTAAAACGATA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","I2Y S43* P133T",3
"lib2","SARS-CoV-2","AAAATCTAAGGGTTCG",2,63.88,10.8,-0.03,0.07,2.85,1.14,0,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","AAAATCTACAGCTACT",12,78.45,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A105L S113L",2
"lib2","SARS-CoV-2","AAAATCTAGTCAAACG",6,139,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37P G86W Y119P",3
"lib2","SARS-CoV-2","AAAATCTCAATATTTC",4,18.43,6.45,-4.39,0.49,1.5,1.07,0.02,">1 nonsynonymous","A89F G152K N157D",3
"lib2","SARS-CoV-2","AAAATCTCTAAGATAG",3,50.25,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S113T Y121T G146F",3
"lib2","SARS-CoV-2","AAAATCTGATTTCACC",1,24.52,9.39,-1.45,0.14,2.08,1.13,0.01,">1 nonsynonymous","S19T D90N E141A V173L",4
"lib2","SARS-CoV-2","AAAATCTGCCCACAGA",1,9.48,6,-4.84,2,1.5,1.06,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","AAAATCTGGACAACTT",6,36.98,10.4,-0.43,0.06,2.94,1.09,0,">1 nonsynonymous","G9I D97N",2
"lib2","SARS-CoV-2","AAAATCTTAGTCCTCC",2,0.45,NA,NA,NA,NA,NA,NA,"stop","N151A P161* P197H",3
"lib2","SARS-CoV-2","AAAATCTTATCCTAAA",5,46.16,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V11N K56I G86Q Q168G",4
"lib2","SARS-CoV-2","AAAATCTTCAGTGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","AAAATCTTCTGTTGCG",4,91.1,10.26,-0.58,0.06,2.83,1,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","AAAATCTTGCAACTCC",1,17.99,9.33,-1.5,0.11,2.03,1,0.01,">1 nonsynonymous","S69K L122Y P191T G196N",4
"lib2","SARS-CoV-2","AAAATCTTGCGAGTGG",4,75.9,9.87,-0.97,0.03,2.94,1.08,0,">1 nonsynonymous","K87M G116V",2
"lib2","SARS-CoV-2","AAAATCTTGTTTTACG",3,70.31,9.89,-0.95,0.07,2.2,1.08,0,">1 nonsynonymous","N4S P133R",2
"lib2","SARS-CoV-2","AAAATGAAAAAACAAA",3,18.52,10.89,0.06,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATGAAAACTAGAA",17,104.04,10.72,-0.12,0.03,2.99,1.01,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","AAAATGAAAATACTAA",1,47.4,8.48,-2.36,0.12,2.97,1.08,0.01,">1 nonsynonymous","K87S G117V",2
"lib2","SARS-CoV-2","AAAATGAAACCTATGA",1,6.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S D97G",2
"lib2","SARS-CoV-2","AAAATGAAAGGTCTCT",11,141.74,10.88,0.04,0.04,2.92,1.08,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","AAAATGAAATAGTGCA",11,137.94,8.56,-2.27,0.06,2.6,1.06,0,">1 nonsynonymous","N40Y K48R C61S S113G L122Y K128F",6
"lib2","SARS-CoV-2","AAAATGAACAAAGACC",1,9.22,9.5,-1.33,0.16,2.05,1.01,0.01,">1 nonsynonymous","D34E S41L N107S K198G",4
"lib2","SARS-CoV-2","AAAATGAACATGTTTT",3,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K F99T",2
"lib2","SARS-CoV-2","AAAATGAACTATAAAA",1,10.53,10.81,-0.03,0.06,2.94,1.09,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","AAAATGAAGAAGATGT",4,34.09,10.85,0.01,0.09,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATGAAGATATAGG",7,73.83,8.94,-1.9,0.13,1.73,1.07,0.01,">1 nonsynonymous","G86N E154I",2
"lib2","SARS-CoV-2","AAAATGAAGCTGCCAA",15,25.97,6.44,-4.39,0.69,1.5,1.28,0.04,">1 nonsynonymous","A14T G83K K114T N120G N171I L183D",6
"lib2","SARS-CoV-2","AAAATGAAGGTATTTT",3,30.14,10.73,-0.11,0.06,2.9,1.1,0,"1 nonsynonymous","I104C",1
"lib2","SARS-CoV-2","AAAATGAATAATCATA",12,5.71,NA,NA,NA,NA,NA,NA,"stop","K48Y F70L A105* Y119V",4
"lib2","SARS-CoV-2","AAAATGACAGGAACCA",6,72.93,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T85L A105L R124S",3
"lib2","SARS-CoV-2","AAAATGACCATTATAT",8,104.3,9.27,-1.57,0.06,1.83,1.07,0,">1 nonsynonymous","D34A W106V P149D",3
"lib2","SARS-CoV-2","AAAATGACTACCAATT",6,127.83,9.87,-0.97,0.06,2.81,1.14,0,"1 nonsynonymous","N171G",1
"lib2","SARS-CoV-2","AAAATGAGACACGATG",5,87.3,10.41,-0.43,0.04,2.95,1.02,0,">1 nonsynonymous","T140E F185I",2
"lib2","SARS-CoV-2","AAAATGAGCGCAATTT",4,18.76,6.02,-4.81,1.24,1.5,1.44,0.02,">1 nonsynonymous","D98Q V103E C158T Q176V",4
"lib2","SARS-CoV-2","AAAATGAGTCGCCGCG",7,129.73,10.23,-0.61,0.05,2.66,1.04,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","AAAATGATAGAGGACA",3,9.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F12L P54T I104S E135T L183Y T201E",6
"lib2","SARS-CoV-2","AAAATGATATGTTGGT",2,30.29,10.34,-0.49,0.27,1.89,1,0.04,">1 nonsynonymous","R16V N24H N107G N120I",4
"lib2","SARS-CoV-2","AAAATGATCATAAAAA",5,57.65,10.85,0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATGATCTGAAGAA",22,200.08,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F12N A18I N40D L95M P133T F160T K199T",7
"lib2","SARS-CoV-2","AAAATGATCTTGCAGC",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E R73Y Y91L",3
"lib2","SARS-CoV-2","AAAATGATGAGAAACT",3,1.87,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib2","SARS-CoV-2","AAAATGATGGAGTGAA",10,368.72,10.25,-0.59,0.04,2.92,1.03,0,"1 nonsynonymous","A33K",1
"lib2","SARS-CoV-2","AAAATGATTGCGTTGC",9,70.69,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6S V32I R73A T85A N107S T140I P149V",7
"lib2","SARS-CoV-2","AAAATGATTGGTTAGG",6,4.02,NA,NA,NA,NA,NA,NA,"stop","K48D W106*",2
"lib2","SARS-CoV-2","AAAATGCAAGAGAACT",1,11.45,7.98,-2.86,0.22,1.99,1.13,0.02,">1 nonsynonymous","G9T V65E",2
"lib2","SARS-CoV-2","AAAATGCAATAAAGCT",6,70.7,10.68,-0.16,0.04,2.96,1.06,0,">1 nonsynonymous","K56N G116N",2
"lib2","SARS-CoV-2","AAAATGCACACAGGAA",3,49.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I88K C102S K132S T201M",4
"lib2","SARS-CoV-2","AAAATGCACATTATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35* P133*",2
"lib2","SARS-CoV-2","AAAATGCACGAATGTC",1,31.07,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","W23L S113H",2
"lib2","SARS-CoV-2","AAAATGCCATGAGTAA",6,196.27,10.63,-0.21,0.03,2.96,1.02,0,">1 nonsynonymous","V37R T46Y E141S",3
"lib2","SARS-CoV-2","AAAATGCCCAATGGAC",9,240.67,10.84,0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATGCCCTCAAAGC",5,14.48,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V65K V103T L122S K128V",4
"lib2","SARS-CoV-2","AAAATGCCGTTAAAAT",1,33.57,7.17,-3.66,0.23,1.5,1.05,0.02,">1 nonsynonymous","A18T G146Y F167L",3
"lib2","SARS-CoV-2","AAAATGCGCAAAAGTC",14,71.71,6.8,-4.04,0.32,1.5,1.15,0.02,">1 nonsynonymous","D59R D112I S139V",3
"lib2","SARS-CoV-2","AAAATGCGCCTGTCTA",1,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L S19Y C31I L38F R127P P149V",6
"lib2","SARS-CoV-2","AAAATGCGGTGCTTGG",3,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S G74R S129V C158M V173I",5
"lib2","SARS-CoV-2","AAAATGCTAATATGGT",10,128.19,10.44,-0.4,0.03,2.97,1.01,0,">1 nonsynonymous","D59T D97T N120L",3
"lib2","SARS-CoV-2","AAAATGCTAGCATCCA",6,13.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5F A14E D90F P161C V182L",5
"lib2","SARS-CoV-2","AAAATGCTATTAATAT",6,135.21,8.33,-2.51,0.11,2.27,1.11,0,">1 nonsynonymous","A18E T170I",2
"lib2","SARS-CoV-2","AAAATGCTATTAATCT",1,32.57,10.75,-0.08,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATGCTGAGACCAT",10,106.49,8.37,-2.46,0.14,2.42,1.03,0.01,">1 nonsynonymous","A33V V37M G51A G166M",4
"lib2","SARS-CoV-2","AAAATGCTGCACCGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Q84S N110* Y119G",3
"lib2","SARS-CoV-2","AAAATGCTGCAGACCA",4,18.75,6,-4.84,2,3,1.06,0,">1 nonsynonymous","N4L T46A P54V G83D S184K",5
"lib2","SARS-CoV-2","AAAATGCTTAGCTTAA",3,78.87,10.65,-0.19,0.07,2.9,1.07,0,">1 nonsynonymous","V32E Y39A T201M",3
"lib2","SARS-CoV-2","AAAATGGAAAAAATTA",15,72.06,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V180E T201G",2
"lib2","SARS-CoV-2","AAAATGGAAGTAGAAT",11,200.88,10.58,-0.26,0.03,2.99,1.02,0,">1 nonsynonymous","G83C K132T K198M",3
"lib2","SARS-CoV-2","AAAATGGAATCCTAGC",6,119.43,10.15,-0.69,0.05,2.73,1.02,0,">1 nonsynonymous","A22T Y91L",2
"lib2","SARS-CoV-2","AAAATGGAGACTGGCT",13,5.03,NA,NA,NA,NA,NA,NA,"stop","N13S A18* F156E",3
"lib2","SARS-CoV-2","AAAATGGCATTAACCG",3,0.49,NA,NA,NA,NA,NA,NA,"stop","C6* F12G N107I N118P Y143I F160E",6
"lib2","SARS-CoV-2","AAAATGGCGTATCGGC",10,138.56,9.66,-1.18,0.05,2.81,1.12,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","AAAATGGGACACATAC",4,27.34,6.3,-4.54,0.85,1.5,1.24,0.04,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","AAAATGGGGATAGAAA",7,93.91,10.92,0.08,0.04,3,1.03,0,"1 nonsynonymous","V153R",1
"lib2","SARS-CoV-2","AAAATGGGGTCCATTA",1,8.9,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","N92K",1
"lib2","SARS-CoV-2","AAAATGGGTAGGTACA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F8Q A18Y R73* L131E G174V",5
"lib2","SARS-CoV-2","AAAATGGTCAAATGGA",13,126.85,10.91,0.07,0.06,2.9,1.11,0,">1 nonsynonymous","N24R L122V",2
"lib2","SARS-CoV-2","AAAATGGTCATCCGCA",3,20.71,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L38G I138E R179L",3
"lib2","SARS-CoV-2","AAAATGGTGAGCGAAC",5,37.71,9.62,-1.21,0.19,1.64,1.08,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AAAATGTAAATAAACA",14,115.22,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I28S T100Y E135V G146W P149S",5
"lib2","SARS-CoV-2","AAAATGTAATTAATCT",1,8.07,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","E135T G146L G152T",3
"lib2","SARS-CoV-2","AAAATGTAGCTCTAAA",1,17.29,8.32,-2.51,0.37,1.71,1.07,0.05,">1 nonsynonymous","W23E E154S",2
"lib2","SARS-CoV-2","AAAATGTATATACATA",5,38.22,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D68M N157V",2
"lib2","SARS-CoV-2","AAAATGTATTCTACTC",19,216.25,10.3,-0.53,0.04,2.93,1.06,0,">1 nonsynonymous","A67V N120Y",2
"lib2","SARS-CoV-2","AAAATGTGAATTACGC",5,63.04,10.31,-0.53,0.03,3,1,0,"1 nonsynonymous","K87G",1
"lib2","SARS-CoV-2","AAAATGTTACAAACCA",1,23.06,9.41,-1.42,0.16,1.98,1.03,0.01,">1 nonsynonymous","I28G T55E T63F",3
"lib2","SARS-CoV-2","AAAATGTTCACCCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* G9I N58C W106M Y119K",5
"lib2","SARS-CoV-2","AAAATGTTCCTTTCAC",3,56.4,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41R F47K F167G",3
"lib2","SARS-CoV-2","AAAATGTTGACGATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S I28S Y175M",3
"lib2","SARS-CoV-2","AAAATGTTGCGATTAC",1,8.7,10.62,-0.22,0.08,2.89,1.04,0,">1 nonsynonymous","N58I V153M",2
"lib2","SARS-CoV-2","AAAATGTTTAAGGAAT",3,39.23,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44Y D137G Y143V",3
"lib2","SARS-CoV-2","AAAATGTTTCACTTAC",2,35.6,10.21,-0.63,0.08,2.61,1.09,0,">1 nonsynonymous","V37N G51A T201R",3
"lib2","SARS-CoV-2","AAAATTAAAACTGAAT",9,82.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16M C49F P82A Y175P",4
"lib2","SARS-CoV-2","AAAATTAAAGAAATAA",2,25.98,6,-4.84,0.79,3,1.12,0,">1 nonsynonymous","V37L C49S S139D N157F",4
"lib2","SARS-CoV-2","AAAATTAAAGGCCACA",4,15.98,6.13,-4.71,0.39,3,1.09,0,">1 nonsynonymous","D68Q G116H",2
"lib2","SARS-CoV-2","AAAATTAAATAATCCA",7,1.06,NA,NA,NA,NA,NA,NA,"stop","Q79* A81C T148V",3
"lib2","SARS-CoV-2","AAAATTAAATAGGTAT",6,168.7,8.06,-2.78,0.22,1.5,1.06,0.02,">1 nonsynonymous","P54N Y178K",2
"lib2","SARS-CoV-2","AAAATTAAATTTCACG",6,98.49,10.9,0.06,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTAACGTTCGAC",1,22.53,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I72R P82V N107C Y175P",4
"lib2","SARS-CoV-2","AAAATTAACTAAACGT",10,72.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A105L L125E C150R",3
"lib2","SARS-CoV-2","AAAATTAAGTACGATT",15,214.43,10.5,-0.33,0.03,2.91,1.07,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","AAAATTAATACATACA",3,25.66,10.07,-0.76,0.12,2.24,1,0.01,"1 nonsynonymous","C102F",1
"lib2","SARS-CoV-2","AAAATTAATATATCAT",5,41.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86D S113W T140L Q168R",4
"lib2","SARS-CoV-2","AAAATTACAAGTCTTT",12,63.5,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","P82I G172S",2
"lib2","SARS-CoV-2","AAAATTACAATTAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","E10M A105D N118S G146V T170Q V180*",6
"lib2","SARS-CoV-2","AAAATTACATAAGTGG",18,464.55,10.05,-0.78,0.03,2.82,1.04,0,">1 nonsynonymous","L5C C31K S43V A192W",4
"lib2","SARS-CoV-2","AAAATTACATAATAAA",1,22.66,6,-4.84,2,3,1.1,0,">1 nonsynonymous","E10G S43A G155D C158S",4
"lib2","SARS-CoV-2","AAAATTACATAGTGTT",4,130.61,9.7,-1.13,0.07,1.94,1.09,0,">1 nonsynonymous","L131A Y178H",2
"lib2","SARS-CoV-2","AAAATTACCAACTTAT",4,55.68,10.21,-0.63,0.08,2.77,1.09,0,">1 nonsynonymous","A33E N130A T148M",3
"lib2","SARS-CoV-2","AAAATTACCAGCGACA",1,11.45,10.82,-0.02,0.05,2.96,1.06,0,"1 nonsynonymous","N151S",1
"lib2","SARS-CoV-2","AAAATTACCCATTAAG",2,47.09,9.85,-0.98,0.07,2.17,1.09,0,">1 nonsynonymous","R25S V32H",2
"lib2","SARS-CoV-2","AAAATTACGAAAAATC",3,55.02,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K26W D34K A42K L95N W106M V115T",6
"lib2","SARS-CoV-2","AAAATTACGACAGCGA",10,1.28,NA,NA,NA,NA,NA,NA,"stop","F8C R27*",2
"lib2","SARS-CoV-2","AAAATTACGTATAAAT",16,229.15,10.69,-0.14,0.04,2.96,1.06,0,"1 nonsynonymous","D98Q",1
"lib2","SARS-CoV-2","AAAATTAGAACCGAGC",4,45.45,8.09,-2.75,0.26,1.5,1.08,0.03,">1 nonsynonymous","Y123H T148R Y165Q",3
"lib2","SARS-CoV-2","AAAATTAGAATTCTAG",18,705.08,9.14,-1.7,0.03,2.92,1.09,0,">1 nonsynonymous","P54C C61A Y119S G166S",4
"lib2","SARS-CoV-2","AAAATTAGACTATGAC",3,39.08,9.88,-0.96,0.15,2.14,1.1,0.01,"1 nonsynonymous","F8A",1
"lib2","SARS-CoV-2","AAAATTAGGAGACAAA",3,57.46,10.48,-0.35,0.05,2.99,1.01,0,">1 nonsynonymous","C61R K128F",2
"lib2","SARS-CoV-2","AAAATTAGTAAGTATA",5,148.81,10.86,0.03,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTAGTTCTTAAA",3,7.62,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F8Q A105F",2
"lib2","SARS-CoV-2","AAAATTATAACTTTCT",3,8.65,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G74M A81E V173S",3
"lib2","SARS-CoV-2","AAAATTATAATACCCA",3,27.38,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V37G L60S I80R G152D G166F",5
"lib2","SARS-CoV-2","AAAATTATAATTGACA",1,7.78,8.69,-2.14,0.31,2.22,1.2,0.04,">1 nonsynonymous","E10H I142N",2
"lib2","SARS-CoV-2","AAAATTATACGAACTA",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18V I88H S129K Y143C Q168S",5
"lib2","SARS-CoV-2","AAAATTATATAAAACT",11,220.17,10.87,0.03,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAATTATCAAAATAT",7,57.4,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Q79T D98M S164F K198V",4
"lib2","SARS-CoV-2","AAAATTATCAACAACT",5,75.84,7.12,-3.71,0.1,2.13,1.15,0,">1 nonsynonymous","Y143S N151T",2
"lib2","SARS-CoV-2","AAAATTATCATATAAA",7,130.94,10.55,-0.28,0.04,2.92,1.08,0,">1 nonsynonymous","A105S Y123S S129T",3
"lib2","SARS-CoV-2","AAAATTATCGAATTTC",4,55.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N64S G101N N107G N120L",4
"lib2","SARS-CoV-2","AAAATTATGACTACGC",7,36.84,10.85,0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTATGAGTTTGT",5,36.72,10.26,-0.57,0.08,2.86,1.02,0,"1 nonsynonymous","G155W",1
"lib2","SARS-CoV-2","AAAATTATGATAGTTA",14,1.96,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib2","SARS-CoV-2","AAAATTCAAAAACCAG",5,1.14,NA,NA,NA,NA,NA,NA,"stop","N58* G83T L122P",3
"lib2","SARS-CoV-2","AAAATTCAAACCATGT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44V L57* Y119P Q163R",4
"lib2","SARS-CoV-2","AAAATTCAGAAAACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","F17W S41P S53Y Y123*",4
"lib2","SARS-CoV-2","AAAATTCATCTAAAGC",6,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G G86C L95K T140R A190S",5
"lib2","SARS-CoV-2","AAAATTCATCTCATGT",5,63.4,6.07,-4.76,0.86,1.5,1.11,0.02,">1 nonsynonymous","S19T I88Q",2
"lib2","SARS-CoV-2","AAAATTCCAATGCAAA",2,36.2,10.06,-0.78,0.09,2.76,1.06,0,">1 nonsynonymous","K128V G152C",2
"lib2","SARS-CoV-2","AAAATTCCAATGGCTA",4,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V D59R P169R V181R",4
"lib2","SARS-CoV-2","AAAATTCCAGTCAAAA",2,33.52,10.74,-0.1,0.05,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTCCCATTTTTT",4,21.31,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F8D A42G I80T S113I V181E",5
"lib2","SARS-CoV-2","AAAATTCCCTAACCAC",4,39.58,10.76,-0.07,0.04,3,1,0,">1 nonsynonymous","K114S T201I",2
"lib2","SARS-CoV-2","AAAATTCCCTAAGACC",10,43.67,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","Y50F Y91V R127M",3
"lib2","SARS-CoV-2","AAAATTCCGAATTTTG",1,55.64,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20M S36V A89L F99V",4
"lib2","SARS-CoV-2","AAAATTCGACCACAGT",2,87.53,10.82,-0.02,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTCGCCTTTGGA",4,57.57,10.52,-0.32,0.06,2.93,1.03,0,">1 nonsynonymous","D90S P169K",2
"lib2","SARS-CoV-2","AAAATTCGTGCGCATG",5,13.19,6,-4.84,2,3,1.06,0,">1 nonsynonymous","Y21L F62T W106T T201S",4
"lib2","SARS-CoV-2","AAAATTCGTTTATTTG",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K I72Y N107T N118K S129A E186Y",6
"lib2","SARS-CoV-2","AAAATTCTAACCCCCT",2,27.88,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A14H Y66R N92S S139N",4
"lib2","SARS-CoV-2","AAAATTCTATATGACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y K87S P149K",3
"lib2","SARS-CoV-2","AAAATTCTCAGGAAAG",7,72.19,10.77,-0.07,0.05,2.89,1.11,0,">1 nonsynonymous","L5P Y66L T140Q",3
"lib2","SARS-CoV-2","AAAATTCTGGACCGTA",6,43.18,8.59,-2.25,0.11,2.75,1.08,0.01,">1 nonsynonymous","V52L Y143E",2
"lib2","SARS-CoV-2","AAAATTCTGTCTGAGG",1,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I N151K",2
"lib2","SARS-CoV-2","AAAATTCTTGAAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I A42P V103C",3
"lib2","SARS-CoV-2","AAAATTCTTTAGGAAT",1,16.82,10.14,-0.7,0.09,2.82,1.1,0,">1 nonsynonymous","S41W E141S P149Y",3
"lib2","SARS-CoV-2","AAAATTCTTTATTTTT",4,86.82,8.52,-2.32,0.12,2.73,1.09,0.01,"1 nonsynonymous","S113H",1
"lib2","SARS-CoV-2","AAAATTGACACATCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R V37S G51Q K87S D98W",5
"lib2","SARS-CoV-2","AAAATTGACACTGGAA",2,17.23,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y66L D90K N107S F160N G172C",5
"lib2","SARS-CoV-2","AAAATTGACGCGGACC",2,42.1,9.24,-1.6,0.1,1.78,1.08,0.01,">1 nonsynonymous","S69G V194I",2
"lib2","SARS-CoV-2","AAAATTGATGAGCTCT",1,26.92,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N40V D90R G101D L125C",4
"lib2","SARS-CoV-2","AAAATTGATGGATACA",2,48.44,9.33,-1.51,0.18,1.54,1.03,0.01,">1 nonsynonymous","Q84L W106R",2
"lib2","SARS-CoV-2","AAAATTGCAACCCGTA",3,41.32,10.95,0.12,0.06,2.9,1.1,0,"1 nonsynonymous","S43Y",1
"lib2","SARS-CoV-2","AAAATTGCCACGAGGT",16,198.82,10.72,-0.12,0.03,2.95,1.06,0,">1 nonsynonymous","A33L T100F V153G",3
"lib2","SARS-CoV-2","AAAATTGGAACAGGCT",6,155.16,10.79,-0.04,0.03,2.9,1.12,0,"1 nonsynonymous","P149E",1
"lib2","SARS-CoV-2","AAAATTGGATCATACT",16,214.57,10.87,0.04,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAATTGGCACTGTTT",5,68.24,10.89,0.06,0.06,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAATTGGGGAAACTC",7,82.48,10.84,0.01,0.04,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAATTGTAAATCAAA",3,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N L162D A190T K199S",4
"lib2","SARS-CoV-2","AAAATTGTAAGCCATC",8,46.08,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","N4T A14Y C102F G116T",4
"lib2","SARS-CoV-2","AAAATTGTACTGCGGG",6,82.47,10.71,-0.13,0.03,2.99,1.02,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","AAAATTGTCGGCGGCG",20,130.7,9.75,-1.08,0.05,2.1,1.01,0,">1 nonsynonymous","A14Y F44H F62L",3
"lib2","SARS-CoV-2","AAAATTGTGAATAGGA",10,59.77,8.8,-2.04,0.05,1.81,1.1,0,">1 nonsynonymous","C31H L57Y T201R",3
"lib2","SARS-CoV-2","AAAATTGTGAGCCGTA",2,1.64,NA,NA,NA,NA,NA,NA,"stop","I2N Y39K D68V R136*",4
"lib2","SARS-CoV-2","AAAATTGTGGGATCCG",3,0.89,NA,NA,NA,NA,NA,NA,"stop","T3Q Y123A P149R P161* V180G",5
"lib2","SARS-CoV-2","AAAATTGTGTAGAAGT",2,13.52,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V71E D90C G116N L131H N157E",5
"lib2","SARS-CoV-2","AAAATTGTTAAAGGAC",4,11.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68F A81H T201E",3
"lib2","SARS-CoV-2","AAAATTGTTTTCCATA",4,1.12,NA,NA,NA,NA,NA,NA,"stop","N1L I104* N118F",3
"lib2","SARS-CoV-2","AAAATTTAAAAAACCG",4,54.95,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L5W L60T T100G Y143S",4
"lib2","SARS-CoV-2","AAAATTTAAATCTCCT",7,82.15,6,-4.84,2,3,1.2,0,">1 nonsynonymous","L5P C61P N107K L162R",4
"lib2","SARS-CoV-2","AAAATTTAACACCGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T15Q A33M Y123D E141P F156* K199Y",6
"lib2","SARS-CoV-2","AAAATTTAATGAAGCA",7,64.79,10.49,-0.34,0.05,2.9,1.04,0,">1 nonsynonymous","P7V Y35V",2
"lib2","SARS-CoV-2","AAAATTTACATTTTAC",8,92.18,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11T F17R S41T Q176R",4
"lib2","SARS-CoV-2","AAAATTTACCGACGAG",4,21.87,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","N4K N92V D98N V180H",4
"lib2","SARS-CoV-2","AAAATTTACTACAAGA",22,129.21,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50Q A81T P96H F156A",4
"lib2","SARS-CoV-2","AAAATTTATCCACGAT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","A33D A42R D137*",3
"lib2","SARS-CoV-2","AAAATTTCAAATAAAG",5,33.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S69K K114M Y178T",3
"lib2","SARS-CoV-2","AAAATTTCACTCGTAA",5,158.32,10.7,-0.14,0.03,2.94,1.07,0,">1 nonsynonymous","F62C F160D",2
"lib2","SARS-CoV-2","AAAATTTCCTACCCTT",7,55.76,6.34,-4.49,0.5,1.5,1.13,0.02,">1 nonsynonymous","D112Y Y119N K199Q",3
"lib2","SARS-CoV-2","AAAATTTCGAAGAATA",9,38.52,7.71,-3.12,0.19,1.5,1.19,0.01,">1 nonsynonymous","C31R P96N V173N",3
"lib2","SARS-CoV-2","AAAATTTGATTTCTAT",1,8.93,8.32,-2.52,0.41,1.67,1.16,0.07,">1 nonsynonymous","L57C A81T",2
"lib2","SARS-CoV-2","AAAATTTTAAAGTAAA",14,135.29,10.14,-0.69,0.06,2.42,1.02,0,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","AAAATTTTAGATATTA",6,31.84,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8G S139I V180T",3
"lib2","SARS-CoV-2","AAAATTTTATAAACCA",9,241.71,10.57,-0.27,0.03,2.94,1.06,0,">1 nonsynonymous","T100R Y121F Q163H",3
"lib2","SARS-CoV-2","AAAATTTTGACGATAG",6,56.27,9.41,-1.43,0.07,2.82,1.09,0,">1 nonsynonymous","K87E S129L",2
"lib2","SARS-CoV-2","AAAATTTTTAGAAAGC",1,0.72,NA,NA,NA,NA,NA,NA,"stop","N40G P82K G86* D112L F185W",5
"lib2","SARS-CoV-2","AAAATTTTTTGTCAGC",2,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K N130A F160D G166I V173E",5
"lib2","SARS-CoV-2","AAACAAAAAAAAGCTT",6,14.01,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","D90L D97L F160S Y165G",4
"lib2","SARS-CoV-2","AAACAAAAAATAAACA",2,1.08,NA,NA,NA,NA,NA,NA,"stop","K56P N110D L122* I138K",4
"lib2","SARS-CoV-2","AAACAAAAAATCTTCC",6,70.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y39P N92T",2
"lib2","SARS-CoV-2","AAACAAAAACAATACA",1,46.2,9.25,-1.58,0.14,2.7,1.1,0.01,">1 nonsynonymous","S129R N157G Y178N",3
"lib2","SARS-CoV-2","AAACAAAAACCATTAG",2,32.51,10.28,-0.56,0.07,2.89,1,0,"1 nonsynonymous","S139V",1
"lib2","SARS-CoV-2","AAACAAAAACGTCACC",1,11.25,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I2L Y39L Y119C F167H",4
"lib2","SARS-CoV-2","AAACAAAAATGATAAC",3,0.29,NA,NA,NA,NA,NA,NA,"stop","N40L I104* K128F N171H K199L",5
"lib2","SARS-CoV-2","AAACAAAACAATCTAC",13,95.71,6,-4.84,1.47,1.5,1.16,0.01,">1 nonsynonymous","Y21M K94L",2
"lib2","SARS-CoV-2","AAACAAAACAGTAGGG",7,97.12,10.63,-0.2,0.03,2.91,1.09,0,">1 nonsynonymous","T15H E141D",2
"lib2","SARS-CoV-2","AAACAAAACATAACAT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","P96* G116E P133L",3
"lib2","SARS-CoV-2","AAACAAAACCACATTG",4,96.98,10.75,-0.08,0.04,3,1.01,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","AAACAAAAGATAGGAA",8,0,NA,NA,NA,NA,NA,NA,"stop","K48S G86* I138K V173I",4
"lib2","SARS-CoV-2","AAACAAAAGCACCCAG",3,5.55,7.14,-3.69,0.7,2.37,1.07,0.02,">1 nonsynonymous","A33D N58F Y121K",3
"lib2","SARS-CoV-2","AAACAAAAGGGGCACC",1,29.47,6.79,-4.05,0.37,1.5,1.13,0.02,">1 nonsynonymous","L38H F47Y Y91L L162V K198R",5
"lib2","SARS-CoV-2","AAACAAAAGGTGCTCA",4,22.05,8.51,-2.33,0.25,1.71,1.09,0.03,">1 nonsynonymous","S19L A42S",2
"lib2","SARS-CoV-2","AAACAAAAGGTGTACA",2,13.22,10.07,-0.76,0.15,2.12,1,0.01,">1 nonsynonymous","R16G G51K S129L",3
"lib2","SARS-CoV-2","AAACAAAAGTCATCTC",1,16.09,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","G9T G51K K94P Y143L N171H",5
"lib2","SARS-CoV-2","AAACAAAATACACACT",3,19.07,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39P N92K F99L Y119R F185D",5
"lib2","SARS-CoV-2","AAACAAAATCACCATA",15,163.7,9.76,-1.07,0.07,2.12,1.03,0,"1 nonsynonymous","F8Q",1
"lib2","SARS-CoV-2","AAACAAAATGAAAAAC",2,9.52,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","G101V V115P E186Y T201M",4
"lib2","SARS-CoV-2","AAACAAAATGGTACGT",6,97.21,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I2V F8V G101L",3
"lib2","SARS-CoV-2","AAACAAAATTTTATGA",3,61.19,10.27,-0.57,0.06,2.61,1.09,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","AAACAAACAACAAAGA",4,72.59,9.12,-1.71,0.11,2.12,1.1,0,">1 nonsynonymous","D90G P169I",2
"lib2","SARS-CoV-2","AAACAAACACGTGCGA",4,23.37,7.23,-3.61,0.29,1.5,1.06,0.02,">1 nonsynonymous","L5I Y50D",2
"lib2","SARS-CoV-2","AAACAAACATTATCAG",18,107.24,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y159M L183T",2
"lib2","SARS-CoV-2","AAACAAACCAATGTAC",4,19.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V52C K87G P96E S164F",4
"lib2","SARS-CoV-2","AAACAAACCCATAGAC",8,45.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D59L G83Y D90L K114P I142Y",5
"lib2","SARS-CoV-2","AAACAAACCGAATAGA",2,64.1,10.32,-0.51,0.03,2.86,1.1,0,">1 nonsynonymous","S139H K199N",2
"lib2","SARS-CoV-2","AAACAAACCTTCCTTG",2,91.17,9.95,-0.88,0.08,1.85,1.05,0,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","AAACAAACTAATTTTC",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R D97A",2
"lib2","SARS-CoV-2","AAACAAACTCTGGGAG",5,59.88,9.17,-1.67,0.08,2.94,1.1,0,">1 nonsynonymous","K48E N157G",2
"lib2","SARS-CoV-2","AAACAAAGAAAGATCG",2,0,NA,NA,NA,NA,NA,NA,"stop","D90* E154Q",2
"lib2","SARS-CoV-2","AAACAAAGATAACCCT",4,51.75,10.57,-0.27,0.06,2.93,1.03,0,"1 nonsynonymous","F62K",1
"lib2","SARS-CoV-2","AAACAAAGTCACCCTA",5,56.62,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S29R N58S D68V D97Y C150W",5
"lib2","SARS-CoV-2","AAACAAAGTTAATTCT",4,0.77,NA,NA,NA,NA,NA,NA,"stop","G83R G155P T201*",3
"lib2","SARS-CoV-2","AAACAAATAAAAACGG",9,2.41,NA,NA,NA,NA,NA,NA,"stop","S69E Y91I T100A G155R V180*",5
"lib2","SARS-CoV-2","AAACAAATATCTCTAT",7,109.78,9.92,-0.92,0.08,2.34,1.06,0,">1 nonsynonymous","N13S K26L S139N",3
"lib2","SARS-CoV-2","AAACAAATATTAAATT",4,9.59,10,-0.84,0.25,2.3,1.03,0.02,">1 nonsynonymous","R136C N151Y Q163L",3
"lib2","SARS-CoV-2","AAACAAATCACATGCG",5,111.52,8.67,-2.17,0.11,2.11,1.08,0,">1 nonsynonymous","D90W I142K",2
"lib2","SARS-CoV-2","AAACAAATCGTCCAAG",2,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R D90C V103L",3
"lib2","SARS-CoV-2","AAACAAATCGTCTCAG",3,34.65,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A14V N64V Q168P",3
"lib2","SARS-CoV-2","AAACAAATGTTCCCAA",12,175.9,10.83,0,0.04,2.95,1.06,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","AAACAAATTACCCTTA",2,1.77,NA,NA,NA,NA,NA,NA,"stop","P7R R27* K87N E141K F156K",5
"lib2","SARS-CoV-2","AAACAAATTATTATAA",7,2.21,NA,NA,NA,NA,NA,NA,"stop","A89D D97* K198G",3
"lib2","SARS-CoV-2","AAACAAATTTGAAAAC",1,5.06,8,-2.83,0.29,2.09,1.2,0.03,">1 nonsynonymous","R27V Y39G S113F",3
"lib2","SARS-CoV-2","AAACAACAAAATAAGT",5,142.27,10.83,0,0.06,2.96,1.05,0,">1 nonsynonymous","I2N N64S",2
"lib2","SARS-CoV-2","AAACAACAAAGAGCGA",16,57.18,10.03,-0.81,0.13,1.96,1.05,0.01,">1 nonsynonymous","N4V D59S D98V T140A V173L G196I",6
"lib2","SARS-CoV-2","AAACAACAACAATAAC",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T I72S I142S F160G G172R V173P",6
"lib2","SARS-CoV-2","AAACAACACAACACCT",1,60.68,8.98,-1.86,0.09,2.47,1.07,0,">1 nonsynonymous","K114P L162V",2
"lib2","SARS-CoV-2","AAACAACACTACACAC",2,12.62,11.06,0.22,0.19,2.88,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAACAACAGGCTATAT",1,27.97,8.3,-2.53,0.4,1.5,1,0.07,">1 nonsynonymous","L5R L162S",2
"lib2","SARS-CoV-2","AAACAACATATCTATC",3,31.47,10.08,-0.75,0.08,2.5,1,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","AAACAACATCCTGATA",7,99.86,9.44,-1.39,0.08,2.07,1.06,0,">1 nonsynonymous","C6L S129L",2
"lib2","SARS-CoV-2","AAACAACATCTAACCC",9,46.85,6,-4.84,1.1,1.5,1.08,0.01,">1 nonsynonymous","P96A D137K",2
"lib2","SARS-CoV-2","AAACAACATTTATCAT",1,5.87,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","V103F",1
"lib2","SARS-CoV-2","AAACAACCACAAAGAG",6,160.42,10.77,-0.06,0.04,2.97,1.05,0,">1 nonsynonymous","T55L P149H",2
"lib2","SARS-CoV-2","AAACAACCACATTATA",20,116.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L R127Y E135T",3
"lib2","SARS-CoV-2","AAACAACCAGTGCGTA",1,14.24,10.66,-0.18,0.06,2.9,1.1,0,">1 nonsynonymous","T55Y N110P",2
"lib2","SARS-CoV-2","AAACAACCCCTCCTGT",2,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80R F99Y",2
"lib2","SARS-CoV-2","AAACAACCCTATACGT",3,22.74,10.58,-0.25,0.13,2.8,1.04,0.01,">1 nonsynonymous","K87M P197L",2
"lib2","SARS-CoV-2","AAACAACCGCCACAGG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V F134Q P161R",3
"lib2","SARS-CoV-2","AAACAACCGGAGCATC",14,151.77,10.05,-0.79,0.05,2.93,1.04,0,">1 nonsynonymous","F12I F156D Q163F",3
"lib2","SARS-CoV-2","AAACAACCTACACCAC",15,2.13,NA,NA,NA,NA,NA,NA,"stop","I104M Y119W Y143* T201M",4
"lib2","SARS-CoV-2","AAACAACCTATTGCAT",16,23.55,9.48,-1.35,0.3,1.5,1.37,0.05,">1 nonsynonymous","P96S P149Q Q176T",3
"lib2","SARS-CoV-2","AAACAACCTGTATGCT",2,52.47,10.73,-0.1,0.07,2.78,1.1,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","AAACAACGAGAGGACC",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136L Q168P",2
"lib2","SARS-CoV-2","AAACAACGATCCAGTT",11,88.88,10.78,-0.06,0.03,2.94,1.04,0,">1 nonsynonymous","R27E V37D",2
"lib2","SARS-CoV-2","AAACAACGCACATCCG",1,41.53,6,-4.84,1.92,3,1.12,0.01,">1 nonsynonymous","A67D N110T E154W Y175L",4
"lib2","SARS-CoV-2","AAACAACGCTCCTGAT",2,42.55,10.75,-0.09,0.05,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAACTAAAATCTG",6,68.99,9.95,-0.89,0.05,2.68,1.1,0,">1 nonsynonymous","S45V T140C K198G",3
"lib2","SARS-CoV-2","AAACAACTAAACAATA",8,0.36,NA,NA,NA,NA,NA,NA,"stop","K26V A81T N107P G116*",4
"lib2","SARS-CoV-2","AAACAACTAAAGCATC",2,19.97,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","AAACAACTAGATTACG",3,45.12,10.86,0.03,0.05,2.9,1.12,0,"1 nonsynonymous","H189K",1
"lib2","SARS-CoV-2","AAACAACTATTTAACC",11,86.73,10.83,-0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAACTCATCGAAT",3,39.92,11.01,0.18,0.14,2.77,1,0.01,"1 nonsynonymous","P7D",1
"lib2","SARS-CoV-2","AAACAACTCCAGACCT",2,38.46,10.56,-0.27,0.07,3,1.03,0,"1 nonsynonymous","N58C",1
"lib2","SARS-CoV-2","AAACAACTCCCAATAG",1,9.71,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","W106H G146V",2
"lib2","SARS-CoV-2","AAACAACTCTCAGACC",7,62.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A81R C150L",2
"lib2","SARS-CoV-2","AAACAACTCTCTATGC",1,13.79,10.67,-0.17,0.1,2.93,1.11,0,"1 nonsynonymous","E141Y",1
"lib2","SARS-CoV-2","AAACAACTTGGAGCGA",2,23.48,9.93,-0.9,0.09,2.32,1,0,">1 nonsynonymous","N13R T100Y G116L T201D",4
"lib2","SARS-CoV-2","AAACAACTTTTTGTGG",5,87.58,9.6,-1.23,0.05,1.91,1.04,0,">1 nonsynonymous","K26G D59T E141Q",3
"lib2","SARS-CoV-2","AAACAAGAAACCCTTA",5,37.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S69V Q144I Y165I",3
"lib2","SARS-CoV-2","AAACAAGAAACCGGGA",2,17.22,10.7,-0.13,0.1,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAAGAACGAAATT",2,38.02,10.32,-0.51,0.05,2.9,1.04,0,">1 nonsynonymous","E10S T15L",2
"lib2","SARS-CoV-2","AAACAAGAATGATTTA",9,49.23,10.68,-0.15,0.04,3,1,0,">1 nonsynonymous","N4P S36M K132Q",3
"lib2","SARS-CoV-2","AAACAAGACATCCAGT",2,5.78,9.51,-1.33,0.17,2.17,1.15,0.01,">1 nonsynonymous","L5G C31W S129L",3
"lib2","SARS-CoV-2","AAACAAGACTCACTAC",10,49.52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A18Q I80T W106Y",3
"lib2","SARS-CoV-2","AAACAAGACTTCTCAT",2,35.04,10.82,-0.02,0.08,2.84,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACAAGAGAAACGAA",4,72.55,6,-4.84,2,1.7,1.21,0.01,">1 nonsynonymous","K132G P177R",2
"lib2","SARS-CoV-2","AAACAAGAGATTAAGA",12,122.27,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A81V Q84T N107V K132P E141V",5
"lib2","SARS-CoV-2","AAACAAGAGCATTAAA",2,25.05,10.71,-0.13,0.1,2.98,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAACAAGAGTGATATT",6,181.81,10.28,-0.55,0.04,2.77,1.06,0,">1 nonsynonymous","D90W P149L",2
"lib2","SARS-CoV-2","AAACAAGATAAAGGTA",15,189.1,10.63,-0.21,0.03,2.91,1.08,0,">1 nonsynonymous","R78T G83R",2
"lib2","SARS-CoV-2","AAACAAGATTAGAACT",13,199.54,10.67,-0.17,0.03,2.97,1.05,0,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","AAACAAGATTAGATAA",3,11.96,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6S V20S K87M",3
"lib2","SARS-CoV-2","AAACAAGCCCTAACAT",7,53.45,6,-4.84,1.54,1.5,1.17,0.01,">1 nonsynonymous","E10K L95E",2
"lib2","SARS-CoV-2","AAACAAGCCTAATAGT",15,2.11,NA,NA,NA,NA,NA,NA,"stop","C31A E141K T201*",3
"lib2","SARS-CoV-2","AAACAAGCGATTTCAT",2,60.63,10.5,-0.34,0.06,2.75,1.09,0,">1 nonsynonymous","D97F F134R P197K",3
"lib2","SARS-CoV-2","AAACAAGGAACCTCGA",9,86.99,8.7,-2.14,0.17,1.59,1.1,0.01,">1 nonsynonymous","V37C T63G I104T S113G",4
"lib2","SARS-CoV-2","AAACAAGGACTACCTT",4,11.55,10.92,0.08,0.11,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAAGGATGGTAAT",4,29.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Q84L F99K Y143R T201D",4
"lib2","SARS-CoV-2","AAACAAGGATGTAAAG",3,33.92,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K26T F47S I72T",3
"lib2","SARS-CoV-2","AAACAAGTAAACCACG",4,26.8,8.58,-2.25,0.15,1.61,1.15,0.01,">1 nonsynonymous","K56W D98L G155D",3
"lib2","SARS-CoV-2","AAACAAGTGACAGATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q D90F N130S D137E",4
"lib2","SARS-CoV-2","AAACAAGTGGATCCAA",5,75.81,10.51,-0.32,0.06,2.98,1.03,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","AAACAATAAAAAATAT",4,7.26,11.32,0.48,0.09,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAATAAAAATCGG",15,99.45,8,-2.83,0.12,1.51,1.09,0.01,">1 nonsynonymous","S36Y K94V L122A G166V",4
"lib2","SARS-CoV-2","AAACAATAAAAGGACC",2,32.44,10.96,0.13,0.05,2.97,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAATAAGACTTTT",1,16.22,6.27,-4.57,1.25,3,1.09,0.01,">1 nonsynonymous","A33L T85K G101P F160A",4
"lib2","SARS-CoV-2","AAACAATAAGGGATAA",1,52.76,10.86,0.02,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAATAGAATTTGT",6,103.82,10.62,-0.21,0.05,2.91,1.1,0,"1 nonsynonymous","K26C",1
"lib2","SARS-CoV-2","AAACAATAGATAGACT",2,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W A42N T55G N92T Y123E V180I",6
"lib2","SARS-CoV-2","AAACAATATATTACCA",3,21.5,8.34,-2.49,0.25,1.5,1.07,0.02,">1 nonsynonymous","A89D Q168A",2
"lib2","SARS-CoV-2","AAACAATATATTGTGT",7,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R T15E D68Q N92T V103Q K132E",6
"lib2","SARS-CoV-2","AAACAATATTATTGTT",3,21.76,9.94,-0.9,0.08,2.72,1,0,">1 nonsynonymous","D90C R136K G152D",3
"lib2","SARS-CoV-2","AAACAATCAACCCTTA",2,32.71,9.31,-1.52,0.1,1.83,1.11,0,">1 nonsynonymous","P7A N24F L38M",3
"lib2","SARS-CoV-2","AAACAATCAACTTTTG",8,108.12,8.65,-2.19,0.09,2.71,1.09,0,">1 nonsynonymous","F62R G166H",2
"lib2","SARS-CoV-2","AAACAATCAATATTGA",11,85.08,6.21,-4.63,0.84,1.5,1.11,0.03,">1 nonsynonymous","E10V R25G S41P C49S Y123C P149C",6
"lib2","SARS-CoV-2","AAACAATCACACATCT",11,92.44,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","V103K N120G R136Y",3
"lib2","SARS-CoV-2","AAACAATCATATTCCC",4,95.83,10.75,-0.08,0.04,2.93,1.09,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","AAACAATCCACAGCAG",2,32.54,10.91,0.07,0.05,2.94,1.08,0,">1 nonsynonymous","A33W T55H E141A",3
"lib2","SARS-CoV-2","AAACAATCCGCAGCAT",4,40.15,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V103G P169R K198P",3
"lib2","SARS-CoV-2","AAACAATCGACTAATG",7,108.63,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G51I I104R G146W Q176Y",4
"lib2","SARS-CoV-2","AAACAATCGCACCAAC",2,0.53,NA,NA,NA,NA,NA,NA,"stop","N40* C61P",2
"lib2","SARS-CoV-2","AAACAATCTGTCCTAA",12,125.27,10.25,-0.58,0.05,2.75,1.02,0,">1 nonsynonymous","F62K D90R",2
"lib2","SARS-CoV-2","AAACAATGTTAATACC",2,9.35,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19I A89W D97Y",3
"lib2","SARS-CoV-2","AAACAATTAAACCCAA",1,0.29,NA,NA,NA,NA,NA,NA,"stop","S36* P133S",2
"lib2","SARS-CoV-2","AAACAATTACATATAA",1,115.63,9.1,-1.74,0.04,2.84,1.15,0,">1 nonsynonymous","Y119I S129G K199E",3
"lib2","SARS-CoV-2","AAACAATTCAACCCAG",5,86.02,10.28,-0.56,0.04,2.93,1.07,0,">1 nonsynonymous","N120D G174P",2
"lib2","SARS-CoV-2","AAACAATTCACATTAA",5,74.1,8.2,-2.63,0.17,2.22,1.02,0.01,">1 nonsynonymous","T15F S43I C61Q P149F G166C",5
"lib2","SARS-CoV-2","AAACAATTCTATGACA",7,1.7,NA,NA,NA,NA,NA,NA,"stop","C6D K56W G83* N107Y",4
"lib2","SARS-CoV-2","AAACAATTGAATTAGT",2,39.98,7.92,-2.92,0.15,1.84,1.03,0.01,">1 nonsynonymous","S45Y L60K E135S G166V",4
"lib2","SARS-CoV-2","AAACAATTGAGATGCA",5,22.51,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y21T Y50S",2
"lib2","SARS-CoV-2","AAACAATTTAGCGGTA",6,429.02,10.47,-0.36,0.02,2.96,1.02,0,">1 nonsynonymous","C61V Y178T A190E",3
"lib2","SARS-CoV-2","AAACAATTTGACCAAT",2,31.18,6.61,-4.23,0.62,1.5,1.09,0.05,">1 nonsynonymous","S45Y Y50S P82F",3
"lib2","SARS-CoV-2","AAACACAAAAAACGAA",9,52.29,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","P7W Y50D P82A N151R",4
"lib2","SARS-CoV-2","AAACACAAATACCCAC",5,29.77,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","V20M N151L",2
"lib2","SARS-CoV-2","AAACACAAATGACATC",2,8.11,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","I2Q C61F V103M S139L T170G",5
"lib2","SARS-CoV-2","AAACACAACAGCGCGC",2,54.56,10.33,-0.51,0.09,2.71,1.05,0,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","AAACACAACATTGTAG",19,165.35,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D90N N107Y Y121T",3
"lib2","SARS-CoV-2","AAACACAAGCGTGTTA",2,12.56,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V52S S139P",2
"lib2","SARS-CoV-2","AAACACAAGGTTAACA",2,32.47,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A22L D90W G101C",3
"lib2","SARS-CoV-2","AAACACAAGTGCGAGT",2,90.68,8.41,-2.43,0.09,3,1.06,0,">1 nonsynonymous","K87L L125Y L188I",3
"lib2","SARS-CoV-2","AAACACAAGTTTTCCT",15,178.32,10.68,-0.15,0.05,2.84,1.12,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AAACACAATCCCCAAA",3,42.01,10.87,0.03,0.04,2.81,1.2,0,"1 nonsynonymous","L122Q",1
"lib2","SARS-CoV-2","AAACACAATGAGATGG",4,25.58,8.71,-2.13,0.43,1.55,1.25,0.07,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","AAACACACAAATACAT",10,167.14,9.46,-1.38,0.07,2,1.07,0,">1 nonsynonymous","C6F F12A K199I",3
"lib2","SARS-CoV-2","AAACACACAAATCTCA",1,102.8,8.47,-2.37,0.14,2.97,1.04,0.01,">1 nonsynonymous","T55A Y175M",2
"lib2","SARS-CoV-2","AAACACACCATCTAGT",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47C N130K C150N",3
"lib2","SARS-CoV-2","AAACACACGACAGAAG",3,38.82,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A105E E154R Y178P",3
"lib2","SARS-CoV-2","AAACACACGCTGTAGC",4,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63C L122Q R179P",3
"lib2","SARS-CoV-2","AAACACACTCTATGCT",4,40.21,9.12,-1.72,0.07,2.85,1.09,0,">1 nonsynonymous","R27M S45T Y119E P197N",4
"lib2","SARS-CoV-2","AAACACACTTACCTAT",10,69.56,7.06,-3.77,0.38,1.5,1.1,0.03,">1 nonsynonymous","S69G A89V L122W S129R",4
"lib2","SARS-CoV-2","AAACACAGAGTCCCAG",1,57.65,8.65,-2.19,0.07,2.62,1.07,0,">1 nonsynonymous","V77M Y119I",2
"lib2","SARS-CoV-2","AAACACAGCCACTTCC",3,32.4,9.53,-1.31,0.07,2.77,1.1,0,">1 nonsynonymous","G155F C195F",2
"lib2","SARS-CoV-2","AAACACAGCCTCTATT",1,95.14,9.72,-1.11,0.08,2.02,1.09,0,">1 nonsynonymous","S36V C61P Q84N",3
"lib2","SARS-CoV-2","AAACACAGCTTATAAT",10,146.85,8.34,-2.5,0.11,2.61,1.11,0.01,">1 nonsynonymous","N1R P7S Y175S",3
"lib2","SARS-CoV-2","AAACACATCCAGGAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","I88* D137G",2
"lib2","SARS-CoV-2","AAACACATCTTAGCAC",3,18.95,10.59,-0.24,0.07,2.85,1.16,0,">1 nonsynonymous","K114F T140R",2
"lib2","SARS-CoV-2","AAACACATGCCAAAAC",14,24.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15E G51R D59L F99N",4
"lib2","SARS-CoV-2","AAACACATGTATACTA",1,41.01,10.88,0.04,0.07,2.95,1.05,0,"1 nonsynonymous","Y35M",1
"lib2","SARS-CoV-2","AAACACATTAATAACC",14,221.99,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D98H Y159S",2
"lib2","SARS-CoV-2","AAACACATTGCAACTT",2,56.65,8.55,-2.28,0.25,1.64,1.13,0.02,">1 nonsynonymous","R25W I138L V153S",3
"lib2","SARS-CoV-2","AAACACATTGTTAAAT",3,5.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D68T L95F",2
"lib2","SARS-CoV-2","AAACACATTTCCTAAC",4,62.06,10.54,-0.29,0.05,2.95,1.04,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","AAACACCAACAACTTA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAACACCACACCTGAT",6,3.13,NA,NA,NA,NA,NA,NA,"stop","I2* I138W F185A",3
"lib2","SARS-CoV-2","AAACACCACAGTGCAT",1,9.92,8.97,-1.87,0.13,1.75,1.09,0.01,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","AAACACCACTAGACCT",7,125.53,10.62,-0.21,0.06,2.91,1.08,0,">1 nonsynonymous","N1D K87M",2
"lib2","SARS-CoV-2","AAACACCAGGTCAACT",10,187.52,8.47,-2.37,0.24,1.5,1,0.02,">1 nonsynonymous","Y39T D59R S69E",3
"lib2","SARS-CoV-2","AAACACCCCTAAGCGC",2,52.69,10.74,-0.1,0.09,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACACCCTTTATCCA",2,18.43,9.86,-0.97,0.24,2.01,1,0.03,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","AAACACCGAACTATGT",9,6.37,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","A22N W106S P133L S164T",4
"lib2","SARS-CoV-2","AAACACCGGGATTAAC",15,184.51,6.36,-4.48,0.16,1.8,1.12,0,">1 nonsynonymous","L60A G86L",2
"lib2","SARS-CoV-2","AAACACCTCAGGATTA",1,12.28,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L38M T46D G146W Q176L",4
"lib2","SARS-CoV-2","AAACACCTGAATGGGT",1,27.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L I142Q",2
"lib2","SARS-CoV-2","AAACACCTGCACAAAT",3,64.99,9.37,-1.47,0.06,1.97,1.09,0,">1 nonsynonymous","E76K V173A",2
"lib2","SARS-CoV-2","AAACACCTTGTGCTAT",5,29.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25M G83Y L131G",3
"lib2","SARS-CoV-2","AAACACCTTTAGATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K Y91L F99L V103R G117W S200F",6
"lib2","SARS-CoV-2","AAACACGAAGACTAGC",4,56.71,10.92,0.08,0.08,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACACGAATGCAACA",1,34.74,10.33,-0.5,0.07,2.85,1.05,0,">1 nonsynonymous","G51R T148Y S184C",3
"lib2","SARS-CoV-2","AAACACGAGCCTCCCT",1,16.93,10.76,-0.08,0.07,2.93,1.04,0,"1 nonsynonymous","T63I",1
"lib2","SARS-CoV-2","AAACACGCATAGTAAA",1,25.11,6.23,-4.61,0.72,1.5,1.2,0.02,">1 nonsynonymous","A89W D98L N120P V153G",4
"lib2","SARS-CoV-2","AAACACGCCACCGCTA",2,5.19,NA,NA,NA,NA,NA,NA,"stop","I2T D97L L122* Y159G",4
"lib2","SARS-CoV-2","AAACACGCCCCCTGAA",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L T85I P149H",3
"lib2","SARS-CoV-2","AAACACGCTACATCAC",1,49.24,9.84,-1,0.07,2.88,1.12,0,">1 nonsynonymous","S29E T170M",2
"lib2","SARS-CoV-2","AAACACGCTACCGGCC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","A14K K48A N107*",3
"lib2","SARS-CoV-2","AAACACGCTCATTTAA",2,6.3,9.78,-1.06,0.5,1.5,1,0.04,">1 nonsynonymous","P96I F134Y",2
"lib2","SARS-CoV-2","AAACACGGAGGCTGAC",4,102.63,10.64,-0.19,0.07,2.85,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACACGGGTAGCTAG",1,26.77,9.41,-1.43,0.32,1.68,1.07,0.04,">1 nonsynonymous","N4R F17M S139I",3
"lib2","SARS-CoV-2","AAACACGGTAAAGTAC",4,78.69,10.76,-0.07,0.04,2.93,1.07,0,">1 nonsynonymous","L5Y V37N G51R",3
"lib2","SARS-CoV-2","AAACACGTAAAATAAT",5,73.9,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","G51V G74A K87V D98P G174V",5
"lib2","SARS-CoV-2","AAACACGTCCTTCCTT",6,85.09,8.65,-2.18,0.08,2.45,1.06,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","AAACACTAAACTAAGT",3,24.33,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I138G Y143R Q176T",3
"lib2","SARS-CoV-2","AAACACTAAGTCAAAC",7,61.82,10.18,-0.66,0.07,2.76,1.02,0,">1 nonsynonymous","P54L D59N W106M",3
"lib2","SARS-CoV-2","AAACACTAATCTGACA",3,5.62,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G101M P197S",2
"lib2","SARS-CoV-2","AAACACTATCTATGCC",3,83.76,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V11C R27K G86Q D112T N120L Q144E C150L",7
"lib2","SARS-CoV-2","AAACACTATGATCTAT",3,54.03,10.81,-0.03,0.04,2.97,1.03,0,">1 nonsynonymous","N24K E141Y",2
"lib2","SARS-CoV-2","AAACACTCAACAGTAT",8,47,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","F99K V115H V182L K199T",4
"lib2","SARS-CoV-2","AAACACTCAGCGGATC",3,33.62,6.06,-4.77,1.18,1.5,1.19,0.04,">1 nonsynonymous","N4R Y39Q F62D D68A P82L",5
"lib2","SARS-CoV-2","AAACACTCAGTATTTA",2,17.08,10.71,-0.12,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACACTCTATTTATT",6,65.81,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","G9Q V20E N64S H189S",4
"lib2","SARS-CoV-2","AAACACTCTCCTTTGA",6,49.49,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91C G101Y Y143L S184A",4
"lib2","SARS-CoV-2","AAACACTGAACAAAAG",12,156.67,10.51,-0.33,0.05,2.91,1.1,0,">1 nonsynonymous","Y35W T63K P149T G155R",4
"lib2","SARS-CoV-2","AAACACTGTTTTAAAA",3,42.93,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P82N K87P R124C N130D G146L",5
"lib2","SARS-CoV-2","AAACACTTAAATCATG",1,41.95,10.83,0,0.06,2.9,1.12,0,">1 nonsynonymous","K56T P197M",2
"lib2","SARS-CoV-2","AAACACTTAAATGTGG",3,0,NA,NA,NA,NA,NA,NA,"stop","L5* V11Q D59W G86F K114I",5
"lib2","SARS-CoV-2","AAACACTTAGACAAGT",6,0.36,NA,NA,NA,NA,NA,NA,"stop","T85M D112Y S129*",3
"lib2","SARS-CoV-2","AAACACTTAGGCAAGT",5,38.53,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C6R Y39D V52N R127I T148P",5
"lib2","SARS-CoV-2","AAACACTTCAAAATGT",11,76,6.01,-4.82,0.84,1.5,1.16,0.01,">1 nonsynonymous","L60P D98Y A105V",3
"lib2","SARS-CoV-2","AAACACTTTATTTATC",2,17.27,6.2,-4.64,0.32,2.89,1.06,0,">1 nonsynonymous","P54R C158D",2
"lib2","SARS-CoV-2","AAACACTTTGAGTCCC",2,7.64,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","F70I D90R K132I",3
"lib2","SARS-CoV-2","AAACACTTTGTATCCA",7,325.1,10.24,-0.59,0.03,2.83,1.05,0,">1 nonsynonymous","L60F Y178V",2
"lib2","SARS-CoV-2","AAACAGAAAAAGTGGA",3,37.58,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35I V52N C61Y G172E",4
"lib2","SARS-CoV-2","AAACAGAAAGATCAAA",11,11.56,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N1G F47K C61G D137I",4
"lib2","SARS-CoV-2","AAACAGAAATCACTGG",4,67.19,8.77,-2.06,0.06,3,1.05,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","AAACAGAAGTTAAGCT",2,45.78,10.8,-0.03,0.03,2.96,1.05,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","AAACAGAAGTTTCCCA",7,107.66,10.1,-0.74,0.05,2.36,1.01,0,"1 nonsynonymous","V182T",1
"lib2","SARS-CoV-2","AAACAGAATTATTAGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M E76K",2
"lib2","SARS-CoV-2","AAACAGACAATAGCAT",2,92.27,10.69,-0.14,0.04,2.89,1.1,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","AAACAGACATTGCGCA",2,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P L60A A67G P149W",4
"lib2","SARS-CoV-2","AAACAGACGTAAACAG",9,0.84,NA,NA,NA,NA,NA,NA,"stop","A22G F99*",2
"lib2","SARS-CoV-2","AAACAGACGTAATCGA",3,12.11,10.69,-0.15,0.11,2.86,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGAGATCCCATC",3,29.85,10.76,-0.07,0.05,3,1.01,0,"1 nonsynonymous","G152N",1
"lib2","SARS-CoV-2","AAACAGAGCGAACCTG",3,34.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10N C49E T55H K87L",4
"lib2","SARS-CoV-2","AAACAGAGTATAATTC",1,7.51,8.86,-1.98,0.27,1.79,1.06,0.03,">1 nonsynonymous","T3P A33W N64L I88M L111R",5
"lib2","SARS-CoV-2","AAACAGAGTGCTATTT",11,239.63,10.13,-0.71,0.04,2.9,1.03,0,">1 nonsynonymous","T3L N171C",2
"lib2","SARS-CoV-2","AAACAGATAACTTTGG",6,25.02,8.37,-2.47,0.19,1.56,1.08,0.02,">1 nonsynonymous","Y21Q D34T",2
"lib2","SARS-CoV-2","AAACAGATAATAATTG",2,0.64,NA,NA,NA,NA,NA,NA,"stop","S113* C158V",2
"lib2","SARS-CoV-2","AAACAGATACACATTT",2,9.76,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L60T G101L N157T",3
"lib2","SARS-CoV-2","AAACAGATACCAGCAA",2,25.66,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K94N G172T",2
"lib2","SARS-CoV-2","AAACAGATACCCACTG",3,15.81,10.69,-0.15,0.05,3,1,0,">1 nonsynonymous","P96S L122T",2
"lib2","SARS-CoV-2","AAACAGATATGGAAAA",9,82.41,6.04,-4.8,1.07,1.5,1.15,0.01,">1 nonsynonymous","S53G G101N S147F",3
"lib2","SARS-CoV-2","AAACAGATCTCCTGGT",4,10.57,6.19,-4.64,0.78,3,1.14,0.02,">1 nonsynonymous","F70C G101D",2
"lib2","SARS-CoV-2","AAACAGATCTTATTCC",4,95.44,10.89,0.05,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGATGCATACAT",8,0.28,NA,NA,NA,NA,NA,NA,"stop","K26* C61I A105G I138P",4
"lib2","SARS-CoV-2","AAACAGATTCATCATC",2,23.29,10.48,-0.36,0.05,3,1.01,0,">1 nonsynonymous","V37N Q84C D97S",3
"lib2","SARS-CoV-2","AAACAGATTCCCATTC",2,11.13,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","T63L V103Y",2
"lib2","SARS-CoV-2","AAACAGCAAACCCGAT",15,147.58,10.76,-0.08,0.05,2.91,1.09,0,">1 nonsynonymous","T3S E141Q",2
"lib2","SARS-CoV-2","AAACAGCAAACCGCGA",1,45.64,6.15,-4.68,0.91,1.5,1.2,0.02,">1 nonsynonymous","C102M G117S T140L",3
"lib2","SARS-CoV-2","AAACAGCAATTAGGGG",8,9635.33,9.9,-0.93,0.03,2.87,1.03,0,">1 nonsynonymous","I2V E135S F156L",3
"lib2","SARS-CoV-2","AAACAGCACAATTGGG",4,27.43,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Q79W S113G Q144K",3
"lib2","SARS-CoV-2","AAACAGCACTGGACCT",3,55.36,10.58,-0.25,0.06,2.91,1.08,0,">1 nonsynonymous","N40M P54E A192G",3
"lib2","SARS-CoV-2","AAACAGCAGGCTTACA",14,98.32,6.08,-4.76,0.53,1.5,1.12,0.01,">1 nonsynonymous","Y21C P82L",2
"lib2","SARS-CoV-2","AAACAGCAGGTATAAA",8,59.95,8.81,-2.02,0.11,1.77,1.06,0,">1 nonsynonymous","K48R L60S Y123A R136L",4
"lib2","SARS-CoV-2","AAACAGCATACGATAT",5,25.2,10.76,-0.08,0.09,2.83,1.19,0,"1 nonsynonymous","N151D",1
"lib2","SARS-CoV-2","AAACAGCATGCGACAA",2,19.8,6.9,-3.94,0.21,1.5,1.06,0.01,">1 nonsynonymous","Y35N L60R T170V",3
"lib2","SARS-CoV-2","AAACAGCCAATTCCCT",1,19.57,10.43,-0.41,0.07,2.98,1.07,0,">1 nonsynonymous","P149L V173F S200A",3
"lib2","SARS-CoV-2","AAACAGCCCGACGATT",4,135.63,10.83,-0.01,0.05,2.84,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGCCTGAAAGAG",6,141.46,10.07,-0.77,0.05,2.61,1.09,0,">1 nonsynonymous","P161E S200E",2
"lib2","SARS-CoV-2","AAACAGCGCAATAAAA",6,42.58,9.69,-1.15,0.1,1.93,1.05,0,">1 nonsynonymous","G83K D97H R136L A192T",4
"lib2","SARS-CoV-2","AAACAGCGCTATAAGT",1,54.21,10.2,-0.63,0.07,2.8,1.01,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","AAACAGCGTTCCTCAA",3,36.18,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10L Y119F Q176S",3
"lib2","SARS-CoV-2","AAACAGCTAAAATCTA",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V D68K G86P N107W K114W",5
"lib2","SARS-CoV-2","AAACAGCTCCACTGTA",7,1.74,NA,NA,NA,NA,NA,NA,"stop","V37W V65C L111T Y121Q V173*",5
"lib2","SARS-CoV-2","AAACAGCTGACCTCAA",2,20.55,8.65,-2.18,0.22,2.11,1.05,0.04,">1 nonsynonymous","I88L P149H G174E",3
"lib2","SARS-CoV-2","AAACAGCTGGGTTTCG",1,26.1,10.72,-0.11,0.05,3,1.02,0,"1 nonsynonymous","N120Y",1
"lib2","SARS-CoV-2","AAACAGGAAAATCTCG",1,13.35,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E141D V180Y",2
"lib2","SARS-CoV-2","AAACAGGAATTGTCGA",2,34.87,10.22,-0.62,0.15,2.29,1,0.01,">1 nonsynonymous","V77R T85A",2
"lib2","SARS-CoV-2","AAACAGGAGAATGGAA",2,13.79,6,-4.84,2,1.5,1.06,0.05,">1 nonsynonymous","L60P W106L Y159N",3
"lib2","SARS-CoV-2","AAACAGGCACAAACCT",1,26.17,8.77,-2.06,0.29,1.5,1.08,0.03,">1 nonsynonymous","K56W V115M Y165H",3
"lib2","SARS-CoV-2","AAACAGGCCCGCCGTA",3,65.51,6,-4.84,1.17,1.5,1.15,0.01,">1 nonsynonymous","A14M S36L G146S N157M",4
"lib2","SARS-CoV-2","AAACAGGCGCAAAATA",3,13.57,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","K94N G146P",2
"lib2","SARS-CoV-2","AAACAGGGAAACCATC",13,94.96,10.41,-0.42,0.03,2.9,1.04,0,">1 nonsynonymous","L95M N171H C195F",3
"lib2","SARS-CoV-2","AAACAGGGACTAACTC",3,72.25,10.04,-0.79,0.07,2.05,1.09,0,">1 nonsynonymous","W106S F160H G196A",3
"lib2","SARS-CoV-2","AAACAGGGAGAATGCA",4,25.79,9.39,-1.44,0.09,2.05,1.07,0,">1 nonsynonymous","C6T F12C Y39K",3
"lib2","SARS-CoV-2","AAACAGGGAGTACCCT",5,0.65,NA,NA,NA,NA,NA,NA,"stop","V77T P82T E141*",3
"lib2","SARS-CoV-2","AAACAGGGGCTAATAT",5,97.36,10.83,-0.01,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGGGGTTAGTCC",1,59.51,9.94,-0.9,0.06,2.64,1.07,0,"1 nonsynonymous","S19T",1
"lib2","SARS-CoV-2","AAACAGGGTAATTTTG",19,195.26,9.75,-1.09,0.05,2.29,1.02,0,">1 nonsynonymous","V11C P54L P149Q",3
"lib2","SARS-CoV-2","AAACAGGTCGACGAGA",8,47.38,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23L V37L L57P F99S L122P F167N",6
"lib2","SARS-CoV-2","AAACAGGTGACTCTAT",8,13.68,7.04,-3.79,0.41,2.6,1.2,0.05,">1 nonsynonymous","A42I Y123P V182S",3
"lib2","SARS-CoV-2","AAACAGTAAACTCAAG",18,393.12,9.77,-1.07,0.05,2.6,1.07,0,">1 nonsynonymous","T3P E10L K114I Y123S",4
"lib2","SARS-CoV-2","AAACAGTAAATCAATA",9,113.18,8.25,-2.59,0.2,1.5,1.09,0.02,">1 nonsynonymous","V37L Y50R L125P",3
"lib2","SARS-CoV-2","AAACAGTAAGTACCTA",13,96.64,10.8,-0.03,0.04,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGTAATACCAAA",2,60.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4I F44R N107T E141T T148G",5
"lib2","SARS-CoV-2","AAACAGTACACGCATG",5,146.81,10.79,-0.04,0.07,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACAGTACATACACG",1,66.98,10.86,0.03,0.07,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACAGTATGGGAGAA",3,16.79,10.86,0.03,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACAGTCAACAGCAA",3,5.84,NA,NA,NA,NA,NA,NA,"stop","V71M K94Q A105C V153* P177V",5
"lib2","SARS-CoV-2","AAACAGTCATACAAGA",2,13.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I2L C61R A67Y L95P N171V",5
"lib2","SARS-CoV-2","AAACAGTCATCCAAGA",4,67.48,10.74,-0.09,0.08,2.76,1.02,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","AAACAGTGACATTAAT",10,91.9,10.14,-0.7,0.08,2.66,1.05,0,">1 nonsynonymous","A22M D98T L111W",3
"lib2","SARS-CoV-2","AAACAGTGATGAGCAC",5,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S E76T C102W S147P",4
"lib2","SARS-CoV-2","AAACAGTGGTAAAAAA",5,109.61,10.8,-0.04,0.03,2.93,1.08,0,"1 nonsynonymous","N109L",1
"lib2","SARS-CoV-2","AAACAGTTACTAAAGT",1,61.02,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V115L Y159H F167E",3
"lib2","SARS-CoV-2","AAACAGTTATTGTTTA",5,72.52,10.79,-0.04,0.06,2.94,1.08,0,">1 nonsynonymous","S29F Q84M",2
"lib2","SARS-CoV-2","AAACAGTTCAAATTTA",10,270.76,9.2,-1.63,0.06,2.27,1.07,0,">1 nonsynonymous","Y165L S200I",2
"lib2","SARS-CoV-2","AAACATAAAAGGATTC",10,3.21,NA,NA,NA,NA,NA,NA,"stop","N64K V77L D90T D97*",4
"lib2","SARS-CoV-2","AAACATAAAATATAGT",7,78.29,10.63,-0.2,0.04,2.98,1.03,0,">1 nonsynonymous","I28Y N64D K87R P133A",4
"lib2","SARS-CoV-2","AAACATAAACCTTAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F F62N C158A",3
"lib2","SARS-CoV-2","AAACATAAACTTTCGA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","N30Y F47* C61M I138W",4
"lib2","SARS-CoV-2","AAACATAACAAATTAA",7,63.99,10.72,-0.12,0.06,3,1.04,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","AAACATAACACAATTG",9,4.84,NA,NA,NA,NA,NA,NA,"stop","N1S V32* W106L",3
"lib2","SARS-CoV-2","AAACATAACACCGGGA",1,5.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F F70P P82R G101R Y121H",5
"lib2","SARS-CoV-2","AAACATAACCCCAGCA",7,49.69,6.08,-4.76,1.01,1.5,1.17,0.03,">1 nonsynonymous","S69L G117C E135S Q144N T201P",5
"lib2","SARS-CoV-2","AAACATAAGACACTGT",1,7.69,8.96,-1.88,0.04,2.05,1,0,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","AAACATAAGTGCAAAT",6,23.12,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G51C L131S",2
"lib2","SARS-CoV-2","AAACATAAGTTGTGGA",6,1.98,NA,NA,NA,NA,NA,NA,"stop","P54L D98*",2
"lib2","SARS-CoV-2","AAACATAATAAAATGG",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108T N118C T148N",3
"lib2","SARS-CoV-2","AAACATAATAAATCTG",2,9.84,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","L5Y W23C D98L L122T",4
"lib2","SARS-CoV-2","AAACATAATAGCCTTG",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P K48M P96L P133R I142L",5
"lib2","SARS-CoV-2","AAACATAATATAGCAT",2,33.77,10.13,-0.7,0.08,2.65,1.05,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","AAACATAATATTAGGT",6,377.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K F62W T148A Q176N",4
"lib2","SARS-CoV-2","AAACATAATTTATCGA",2,27.66,10.63,-0.2,0.05,2.94,1.02,0,">1 nonsynonymous","T3E T63V",2
"lib2","SARS-CoV-2","AAACATACCGAACATT",5,38.58,10.81,-0.02,0.05,2.97,1.05,0,"1 nonsynonymous","A18N",1
"lib2","SARS-CoV-2","AAACATACCTAGTACC",10,55.6,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","L60F L95T A105T Q144S S200I",5
"lib2","SARS-CoV-2","AAACATACGATAGTCA",5,18.24,6.02,-4.81,0.3,3,1.06,0,">1 nonsynonymous","N4H R27L S45T L95P W106M Y121G P133I",7
"lib2","SARS-CoV-2","AAACATACGGTGTTAC",3,14.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V20L K56R G155Y T201Q",4
"lib2","SARS-CoV-2","AAACATACTCCTACTT",9,69.08,6,-4.84,1.37,3,1.14,0,">1 nonsynonymous","R136M C158T",2
"lib2","SARS-CoV-2","AAACATAGAATTAGAT",5,56.2,10.81,-0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACATAGACATACTA",12,122.83,10.73,-0.1,0.02,2.97,1.03,0,">1 nonsynonymous","G9S P133G",2
"lib2","SARS-CoV-2","AAACATAGATATAACG",8,0.57,NA,NA,NA,NA,NA,NA,"stop","F8A C49K N118S F185*",4
"lib2","SARS-CoV-2","AAACATAGCATACTAT",4,8.35,6,-4.84,2,1.5,1.16,0.04,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","AAACATAGCGGCGATT",1,6.07,6,-4.84,2,3,1.04,0,">1 nonsynonymous","D90T I104R Y123P K128G",4
"lib2","SARS-CoV-2","AAACATAGGATATCAA",3,18.15,10.21,-0.62,0.14,2.1,1.03,0.01,">1 nonsynonymous","Y50N P197T",2
"lib2","SARS-CoV-2","AAACATAGTAACGGGG",9,134.02,9.97,-0.86,0.06,2.23,1.07,0,"1 nonsynonymous","F17P",1
"lib2","SARS-CoV-2","AAACATAGTAATGAGG",6,124.97,10.84,0.01,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACATAGTACGCACT",10,184.14,9.93,-0.91,0.07,2.24,1.03,0,">1 nonsynonymous","P7Q D97H E135W",3
"lib2","SARS-CoV-2","AAACATATAAACCATT",1,26.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P7S S43N C49Y L57S I138A G155N",6
"lib2","SARS-CoV-2","AAACATATAAATCATA",3,249.84,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5V G9M P149D G172M T201G",5
"lib2","SARS-CoV-2","AAACATATAACGGGAC",3,56.63,10.22,-0.61,0.04,2.89,1.04,0,">1 nonsynonymous","T3L T15G",2
"lib2","SARS-CoV-2","AAACATATACATGGAG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","E10G C49S D98W D112* G146T F160Y C195S",7
"lib2","SARS-CoV-2","AAACATATATGACCTG",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20K",1
"lib2","SARS-CoV-2","AAACATATCACGAAAT",19,188.09,10.84,0,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACATATCAGGAAAT",4,52.98,9.17,-1.66,0.09,2.1,1.12,0,">1 nonsynonymous","S45C T148I G152H G174S",4
"lib2","SARS-CoV-2","AAACATATCTACCTAG",1,11.18,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F17Y S36G G86K I138N P197T",5
"lib2","SARS-CoV-2","AAACATATGAAACACA",7,143.63,10.75,-0.08,0.03,2.93,1.07,0,">1 nonsynonymous","A42D F62V",2
"lib2","SARS-CoV-2","AAACATATGAGTTTGT",3,15.79,6,-4.84,2,1.5,1.07,0.02,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","AAACATATGTTCTGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D G172R",2
"lib2","SARS-CoV-2","AAACATATTATGGAAA",4,40.34,9.93,-0.91,0.09,2.05,1,0,">1 nonsynonymous","D34S P96N T201R",3
"lib2","SARS-CoV-2","AAACATATTGATTAAC",3,61,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I72Y Y119H Q163R",3
"lib2","SARS-CoV-2","AAACATCAAATAGAAA",5,35.84,8.34,-2.5,0.21,2.16,1.15,0.02,">1 nonsynonymous","E10H T100N G166R",3
"lib2","SARS-CoV-2","AAACATCAAGAGTAAA",5,90.22,10.93,0.09,0.05,2.9,1.1,0,"1 nonsynonymous","L122Q",1
"lib2","SARS-CoV-2","AAACATCAATAGTTGA",1,46.58,10.58,-0.25,0.05,2.91,1.02,0,">1 nonsynonymous","T55P D97S",2
"lib2","SARS-CoV-2","AAACATCAATTAACTA",4,10.33,8.01,-2.82,0.32,1.56,1.15,0.04,">1 nonsynonymous","F8L K48R N107W",3
"lib2","SARS-CoV-2","AAACATCAATTACCAA",9,23.88,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A14F N40T F99C S129N",4
"lib2","SARS-CoV-2","AAACATCACCTAGAAA",2,80.78,10.28,-0.55,0.05,2.85,1.12,0,"1 nonsynonymous","N24Y",1
"lib2","SARS-CoV-2","AAACATCAGCAAGACA",6,98.7,9.24,-1.59,0.04,2.91,1.07,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","AAACATCAGCCATATA",13,4.53,NA,NA,NA,NA,NA,NA,"stop","D59R G86T K132* T201Y",4
"lib2","SARS-CoV-2","AAACATCAGCGAGCAG",2,16.79,10.8,-0.03,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACATCAGTTCCTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","N30R Q84P P133F Q144* E154C Y175D",6
"lib2","SARS-CoV-2","AAACATCATAGACCCT",7,0.81,NA,NA,NA,NA,NA,NA,"stop","L5Y S29* G116L R124P E154V F167N",6
"lib2","SARS-CoV-2","AAACATCCACATCACT",9,53.86,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K87F Y121K L162A",3
"lib2","SARS-CoV-2","AAACATCCACCAATCA",6,51.63,7.95,-2.88,0.16,1.7,1.17,0.01,">1 nonsynonymous","A89L V173I",2
"lib2","SARS-CoV-2","AAACATCCAGAGAAAT",6,66.56,10.68,-0.15,0.04,2.94,1.06,0,">1 nonsynonymous","P54M I142F P197R",3
"lib2","SARS-CoV-2","AAACATCCATTACAGG",2,3.47,NA,NA,NA,NA,NA,NA,"stop","N118R N151* P177Q",3
"lib2","SARS-CoV-2","AAACATCCATTTTGCT",6,1.83,NA,NA,NA,NA,NA,NA,"stop","Y143R N151* P161L",3
"lib2","SARS-CoV-2","AAACATCCTAACCCGC",2,45.19,9.16,-1.67,0.25,1.5,1,0.03,">1 nonsynonymous","T46N Y91R D97H",3
"lib2","SARS-CoV-2","AAACATCCTATAATAC",5,98.81,10.81,-0.03,0.03,2.92,1.1,0,"1 nonsynonymous","S200T",1
"lib2","SARS-CoV-2","AAACATCGAAGAACTA",14,213.16,8.32,-2.52,0.21,1.5,1.1,0.02,">1 nonsynonymous","G9K V65Q P96S K128E",4
"lib2","SARS-CoV-2","AAACATCGAGACATTA",3,31.02,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T15F Y35R S43Y D137Y",4
"lib2","SARS-CoV-2","AAACATCTAACATCTA",3,30.31,7.57,-3.27,0.26,1.82,1.15,0.03,">1 nonsynonymous","G51Y E141N G166T",3
"lib2","SARS-CoV-2","AAACATCTACCACAAA",5,75.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S L122A G155R",3
"lib2","SARS-CoV-2","AAACATCTGGGCGTTG",12,160.07,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N40M V71E F99S Q168R",4
"lib2","SARS-CoV-2","AAACATGAACACCAAG",7,1.65,NA,NA,NA,NA,NA,NA,"stop","N13H C49G E76D V103* G155N P191L",6
"lib2","SARS-CoV-2","AAACATGACACCTGAA",15,86.31,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A33M I88M N118T P133M",4
"lib2","SARS-CoV-2","AAACATGACATTAACT",11,0.61,NA,NA,NA,NA,NA,NA,"stop","T15E L60* P96T",3
"lib2","SARS-CoV-2","AAACATGAGTGAATTA",13,163.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D112Q T170S",2
"lib2","SARS-CoV-2","AAACATGATTGCAAAT",1,23.23,9.9,-0.94,0.09,2.07,1,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","AAACATGCAAATTTGC",4,36.34,6.54,-4.3,0.38,1.5,1.14,0.02,">1 nonsynonymous","G86Y S129H V153K K198C",4
"lib2","SARS-CoV-2","AAACATGCATCGCGGC",10,0.92,NA,NA,NA,NA,NA,NA,"stop","K56Y N92T Y119L R127S P169* S200T",6
"lib2","SARS-CoV-2","AAACATGCCATAGTCG",2,28.59,10.65,-0.19,0.06,2.95,1.06,0,">1 nonsynonymous","A42T D98S",2
"lib2","SARS-CoV-2","AAACATGCCTTTTCAT",27,224.6,8.08,-2.76,0.12,1.5,1.11,0.01,">1 nonsynonymous","Q84V F167M",2
"lib2","SARS-CoV-2","AAACATGGAACCTTCA",1,22.09,10.75,-0.08,0.09,2.98,1.03,0,"1 nonsynonymous","S36G",1
"lib2","SARS-CoV-2","AAACATGTAAACCGCA",2,13.16,6.11,-4.73,1.65,1.5,1.29,0.04,">1 nonsynonymous","C102G Y123T I138E L187S",4
"lib2","SARS-CoV-2","AAACATGTCAACCCCA",18,3.14,NA,NA,NA,NA,NA,NA,"stop","N4A S45Y E76*",3
"lib2","SARS-CoV-2","AAACATGTCCCTCACA",7,53.86,6.12,-4.72,1.15,1.5,1.21,0.03,">1 nonsynonymous","G101T P191R",2
"lib2","SARS-CoV-2","AAACATGTCTCATAAA",4,20.95,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S41V C49D A81I N118T",4
"lib2","SARS-CoV-2","AAACATGTGCGTTCCA",11,86.55,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11Y K26M D59M N92F A145Y",5
"lib2","SARS-CoV-2","AAACATGTTAGGGCGA",2,89.15,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D34N G172M",2
"lib2","SARS-CoV-2","AAACATGTTTTCGGAG",4,19.69,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L60K V181W",2
"lib2","SARS-CoV-2","AAACATTAGTTTTCAA",2,21.35,10.99,0.15,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACATTATAAACCAC",2,34.46,9.68,-1.15,0.05,2.82,1.12,0,">1 nonsynonymous","C6S K87C",2
"lib2","SARS-CoV-2","AAACATTATGTGCTAC",2,1.81,NA,NA,NA,NA,NA,NA,"stop","A81* W106R N120H S139W",4
"lib2","SARS-CoV-2","AAACATTCACACAACC",11,111.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Y L95A",2
"lib2","SARS-CoV-2","AAACATTCACGAACTT",8,6.35,NA,NA,NA,NA,NA,NA,"stop","K87* T100F K114Y",3
"lib2","SARS-CoV-2","AAACATTCATGCGCTA",1,14.06,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S19L V37S P133K Y143M T170S",5
"lib2","SARS-CoV-2","AAACATTCGGATGGAC",15,6.9,NA,NA,NA,NA,NA,NA,"stop","T85* D137T",2
"lib2","SARS-CoV-2","AAACATTCGGGAACAC",1,47.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22Y V32S G83R C150A",4
"lib2","SARS-CoV-2","AAACATTCGTAAACCA",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122S T148L",2
"lib2","SARS-CoV-2","AAACATTCTCGATACA",4,98.61,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N4T N30V Y50I K56V L122T",5
"lib2","SARS-CoV-2","AAACATTGAAACCTAA",3,54.64,6.27,-4.56,0.59,1.5,1.17,0.02,"1 nonsynonymous","I88W",1
"lib2","SARS-CoV-2","AAACATTGACTACAAA",7,5.29,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","C6Y D34I V103R P149T",4
"lib2","SARS-CoV-2","AAACATTGTCAATTCA",4,61.87,9.43,-1.41,0.05,2.88,1.12,0,">1 nonsynonymous","G9S C61N N109Y",3
"lib2","SARS-CoV-2","AAACATTGTCCGACAG",5,2.17,NA,NA,NA,NA,NA,NA,"stop","N64* Y123S",2
"lib2","SARS-CoV-2","AAACATTGTCGCCTTT",5,48.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T T63N D112W F156S Q168R",5
"lib2","SARS-CoV-2","AAACATTGTTAATCAG",1,6.75,7.18,-3.65,0.67,1.5,1.06,0.07,">1 nonsynonymous","A33P N58T F62N V103F Y143T",5
"lib2","SARS-CoV-2","AAACATTTAACCCGGC",1,5.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","AAACATTTAGGGTGTT",4,81.89,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F99D T170F",2
"lib2","SARS-CoV-2","AAACATTTGTCCAAAG",14,10.42,NA,NA,NA,NA,NA,NA,"stop","T3S Y50* K87M N107Q R136L L187M A192Q",7
"lib2","SARS-CoV-2","AAACATTTTGACATGA",10,198.21,10.6,-0.23,0.03,2.89,1.06,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","AAACATTTTTCGAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* R127Q",2
"lib2","SARS-CoV-2","AAACCAAAAAAATTTA",5,62.37,10.02,-0.81,0.11,2.33,1.12,0.01,"1 nonsynonymous","E76T",1
"lib2","SARS-CoV-2","AAACCAAAAACGAACA",1,24.42,10.81,-0.02,0.07,2.93,1.11,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","AAACCAAAAACTACAC",5,141.78,10.69,-0.15,0.03,2.95,1.08,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","AAACCAAAATCGCATA",2,30.42,10.49,-0.35,0.04,2.97,1.05,0,">1 nonsynonymous","R16G K48T T201W",3
"lib2","SARS-CoV-2","AAACCAAACACCTTCA",3,105.17,10.64,-0.2,0.03,2.96,1.04,0,"1 nonsynonymous","V65A",1
"lib2","SARS-CoV-2","AAACCAAACTTATTCG",2,18.23,10.51,-0.32,0.08,2.97,1,0,">1 nonsynonymous","L5D T63W",2
"lib2","SARS-CoV-2","AAACCAAAGGCCTCCG",3,72.62,10.16,-0.67,0.07,2.73,1.01,0,">1 nonsynonymous","L57R F160S",2
"lib2","SARS-CoV-2","AAACCAAAGTAACTAC",11,115.13,10.54,-0.29,0.05,2.86,1.06,0,">1 nonsynonymous","E141F G152K",2
"lib2","SARS-CoV-2","AAACCAAATAGGACAT",7,173.89,10.74,-0.1,0.04,2.88,1.12,0,"1 nonsynonymous","G83C",1
"lib2","SARS-CoV-2","AAACCAAATCCTACCA",6,13.11,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D34P D59C Y93E N120A G172S",5
"lib2","SARS-CoV-2","AAACCAAATTATAAGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77F",1
"lib2","SARS-CoV-2","AAACCAACATACCAGA",2,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","AAACCAACATGTACGT",1,13.3,10.07,-0.77,0.22,2.5,1.02,0.01,">1 nonsynonymous","T63Y D98L G152K",3
"lib2","SARS-CoV-2","AAACCAACGTTTCATA",7,89.55,9.36,-1.47,0.09,2.44,1.1,0,">1 nonsynonymous","N107V S129T",2
"lib2","SARS-CoV-2","AAACCAACTTCAACAG",12,123.41,6,-4.84,1.72,3,1.19,0,">1 nonsynonymous","P7A D97L A105W Y123N S139Y G146E",6
"lib2","SARS-CoV-2","AAACCAAGATCTCCCT",5,143.45,10.66,-0.17,0.03,2.95,1.04,0,">1 nonsynonymous","F99W E141V",2
"lib2","SARS-CoV-2","AAACCAAGCTTCTGGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129I",1
"lib2","SARS-CoV-2","AAACCAAGGAATATAA",16,307.24,10.07,-0.76,0.04,2.84,1.05,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","AAACCAAGGATCTCAC",2,10.2,6,-4.84,2,2.67,1.29,0.03,">1 nonsynonymous","T3Y C102H N118F",3
"lib2","SARS-CoV-2","AAACCAAGTGTCCACA",3,48.04,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F70E E141L",2
"lib2","SARS-CoV-2","AAACCAAGTTATGTGA",1,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F F47L",2
"lib2","SARS-CoV-2","AAACCAATCAAAATAA",3,1.56,NA,NA,NA,NA,NA,NA,"stop","D90V T148*",2
"lib2","SARS-CoV-2","AAACCAATCACCAAAT",8,88.95,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y35C S69V T100S D137C",4
"lib2","SARS-CoV-2","AAACCAATCTCCAGAG",1,5.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1Q W23R G83W K128V",4
"lib2","SARS-CoV-2","AAACCAATGAAAAATT",4,40.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12S C31K V37T S43D V65S I72L N107S",7
"lib2","SARS-CoV-2","AAACCAATGGAACCAA",1,34.7,10.07,-0.76,0.1,2.54,1.43,0.01,">1 nonsynonymous","L5E T15R Y123S",3
"lib2","SARS-CoV-2","AAACCAATTAAGCCAG",11,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L N151I",2
"lib2","SARS-CoV-2","AAACCAATTGGCCTTT",6,29.35,10.8,-0.03,0.05,3,1.02,0,"1 nonsynonymous","T55W",1
"lib2","SARS-CoV-2","AAACCACAACGAGATT",8,281.66,8.55,-2.29,0.1,2.98,1.12,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","AAACCACACGAAATAG",11,187.83,10.78,-0.06,0.05,2.85,1.14,0,"1 nonsynonymous","K128A",1
"lib2","SARS-CoV-2","AAACCACAGACTCTTG",3,6.99,10.68,-0.16,0.13,2.92,1.11,0,"1 nonsynonymous","I138V",1
"lib2","SARS-CoV-2","AAACCACATATAAAAC",9,1.53,NA,NA,NA,NA,NA,NA,"stop","G9K F17A N24L D98*",4
"lib2","SARS-CoV-2","AAACCACCAGTCTTAA",7,121.85,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44K D68A R136V",3
"lib2","SARS-CoV-2","AAACCACCTATGTAAA",1,24.62,10.97,0.13,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCACCTCACCCAA",6,117.47,7.47,-3.37,0.17,1.5,1.16,0.01,">1 nonsynonymous","C61S Y91G R127S",3
"lib2","SARS-CoV-2","AAACCACCTCCCTCAT",1,31.35,9.95,-0.88,0.09,2.61,1,0.01,">1 nonsynonymous","K128N E141S G152W",3
"lib2","SARS-CoV-2","AAACCACGAACGTTAG",5,75.74,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S29Y V37A C49Q P54L N107K",5
"lib2","SARS-CoV-2","AAACCACGGCTTACAA",10,7.93,9.78,-1.05,0.13,2.61,1.02,0,">1 nonsynonymous","N1M L5S A89V L95P W106H V153E",6
"lib2","SARS-CoV-2","AAACCACGTTTAGCAA",10,171.51,10.87,0.03,0.04,2.95,1.07,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","AAACCACTAAATCTCC",2,26.09,10.43,-0.4,0.06,2.94,1.01,0,">1 nonsynonymous","N4A I138G",2
"lib2","SARS-CoV-2","AAACCACTAATCCACC",6,98.49,10.78,-0.05,0.05,2.95,1.07,0,">1 nonsynonymous","S41M T55E",2
"lib2","SARS-CoV-2","AAACCACTATAACGCT",8,1.47,NA,NA,NA,NA,NA,NA,"stop","C31* I88W L188P",3
"lib2","SARS-CoV-2","AAACCACTGGCCGCCG",1,8.72,6,-4.84,2,3,1.04,0,">1 nonsynonymous","L5H A14L Y21L V37I F44S Y93L Y119L Q168P",8
"lib2","SARS-CoV-2","AAACCAGAAAAAGTCA",2,15.78,10.71,-0.13,0.13,2.75,1.17,0.01,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","AAACCAGAGTAATATT",19,208.26,9.5,-1.34,0.08,2.04,1.05,0,">1 nonsynonymous","F44L A81T K87F",3
"lib2","SARS-CoV-2","AAACCAGATCCACACG",9,137.05,10.78,-0.06,0.05,2.86,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCAGCTTTAGTCG",2,37.85,10.87,0.03,0.06,2.94,1.09,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","AAACCAGGCTTCCTTT",3,26.43,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T63L G101T K128Y V153I",4
"lib2","SARS-CoV-2","AAACCAGTACAGTAAA",1,4.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","AAACCAGTAGTTAGTT",4,12.5,9.63,-1.2,0.16,1.95,1.07,0.01,">1 nonsynonymous","V11N Q84R E141D",3
"lib2","SARS-CoV-2","AAACCAGTTTCAGTAC",6,134.97,10.72,-0.11,0.07,2.89,1.11,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","AAACCATACCAGAATG",8,41.12,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","I80M A89L C158H T201P",4
"lib2","SARS-CoV-2","AAACCATACCTACCAC",9,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H N40V C61L A81T D90T",5
"lib2","SARS-CoV-2","AAACCATACTCAGTCC",5,50.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40F V103M T170V",3
"lib2","SARS-CoV-2","AAACCATAGAATCTGA",2,1.99,NA,NA,NA,NA,NA,NA,"stop","F126*",1
"lib2","SARS-CoV-2","AAACCATAGATACTTG",6,13.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1Q C6V T148E L183H",4
"lib2","SARS-CoV-2","AAACCATATAAGTGAC",1,73.79,10.65,-0.19,0.04,2.9,1.1,0,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","AAACCATATTAGTTGT",3,14.64,6,-4.84,2,3,1.05,0,">1 nonsynonymous","F99V V103L S113F R127L P161R",5
"lib2","SARS-CoV-2","AAACCATATTGAAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N130* G152C Y159R F167L K198S",5
"lib2","SARS-CoV-2","AAACCATCCAAGCATG",17,1.71,NA,NA,NA,NA,NA,NA,"stop","C49F D112K L122*",3
"lib2","SARS-CoV-2","AAACCATGAAGAAATC",3,28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G83I G86W C150S H189L",4
"lib2","SARS-CoV-2","AAACCATGCGCACTGT",4,47.75,8.64,-2.2,0.1,2.34,1.03,0,">1 nonsynonymous","S41E L60K D112E",3
"lib2","SARS-CoV-2","AAACCATGCGCCCTTA",6,143.85,10.8,-0.04,0.04,2.89,1.1,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","AAACCATGCGTGAATC",2,35.53,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y39P P82L Y91D T100L R136T",5
"lib2","SARS-CoV-2","AAACCATGGCATGTTC",2,55.43,7.13,-3.71,0.33,1.5,1.17,0.03,">1 nonsynonymous","P7R L38Q A89I",3
"lib2","SARS-CoV-2","AAACCATGGTCAGTGT",1,19.71,6.4,-4.44,1.23,1.5,1.24,0.03,">1 nonsynonymous","F44K D98G A105F P177M",4
"lib2","SARS-CoV-2","AAACCATTACGAAGTG",6,10.02,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33D V103Y",2
"lib2","SARS-CoV-2","AAACCATTAGGAAGGG",4,33.22,8.11,-2.73,0.22,2.19,1.04,0.02,">1 nonsynonymous","Y119E G146E",2
"lib2","SARS-CoV-2","AAACCATTATAGCTTA",11,130.68,10.18,-0.65,0.06,2.66,1.07,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AAACCATTATGCATGT",5,92.45,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A89E I142F",2
"lib2","SARS-CoV-2","AAACCATTGAATACTA",6,197.71,10.87,0.04,0.04,2.94,1.08,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","AAACCCAAAATAAAAA",1,19.16,9.94,-0.9,0.11,2.49,1.17,0.01,">1 nonsynonymous","C6V N110L I138D",3
"lib2","SARS-CoV-2","AAACCCAAACATAAGG",10,175.83,10.21,-0.63,0.05,2.74,1.1,0,">1 nonsynonymous","F44G Q144G",2
"lib2","SARS-CoV-2","AAACCCAAACGATGAC",4,11.71,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S36Y L60A G74R P96S P149L",5
"lib2","SARS-CoV-2","AAACCCAACAACCCGT",1,44.67,10.62,-0.22,0.03,2.99,1.01,0,">1 nonsynonymous","N4T G9S E141K T148S K199N",5
"lib2","SARS-CoV-2","AAACCCAAGCTTTTCC",3,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q N13Y Y143C V181N",4
"lib2","SARS-CoV-2","AAACCCAAGGAAGCTA",6,118.44,10.23,-0.61,0.05,2.8,1.07,0,">1 nonsynonymous","F99Y T201D",2
"lib2","SARS-CoV-2","AAACCCACAGCAGAAG",1,6.3,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","L5D R25F G74W D98T",4
"lib2","SARS-CoV-2","AAACCCAGGATTCACC",15,443.6,10.18,-0.65,0.03,2.64,1.03,0,">1 nonsynonymous","N1M K56M Q84L",3
"lib2","SARS-CoV-2","AAACCCATAAACGTGT",7,113.62,10.76,-0.08,0.05,2.95,1.07,0,"1 nonsynonymous","V153Y",1
"lib2","SARS-CoV-2","AAACCCATATTATCCT",2,63.96,10.81,-0.02,0.05,2.89,1,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AAACCCATCCAGTCAC",3,0,NA,NA,NA,NA,NA,NA,"stop","G9D S45* I138P F156R",4
"lib2","SARS-CoV-2","AAACCCATTCACCGCA",5,3.63,NA,NA,NA,NA,NA,NA,"stop","I88V F99L N120* P133H L188V A192W",6
"lib2","SARS-CoV-2","AAACCCCAAAAAGCAA",4,2.36,NA,NA,NA,NA,NA,NA,"stop","N13L F99K Q144L P161G Q176* P191L",6
"lib2","SARS-CoV-2","AAACCCCAATGTTCTA",4,1.93,NA,NA,NA,NA,NA,NA,"stop","L60* T85S K128I",3
"lib2","SARS-CoV-2","AAACCCCACCCCAAGC",7,76.9,10.97,0.13,0.05,2.96,1.06,0,">1 nonsynonymous","S41R L122K",2
"lib2","SARS-CoV-2","AAACCCCACGCCTTAT",4,19.91,9.45,-1.39,0.19,1.84,1.12,0.02,"1 nonsynonymous","F12D",1
"lib2","SARS-CoV-2","AAACCCCATCACTAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S43N N92F F167*",3
"lib2","SARS-CoV-2","AAACCCCCAATAAATG",7,73.39,10.83,-0.01,0.06,2.96,1.07,0,"1 nonsynonymous","S29T",1
"lib2","SARS-CoV-2","AAACCCCCATACTATA",5,67.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5T K94G A105E",3
"lib2","SARS-CoV-2","AAACCCCCCTACGCCT",7,149.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S29M Y93H G146A Y175M",4
"lib2","SARS-CoV-2","AAACCCCCCTAGATTA",8,105.62,9.88,-0.96,0.06,2.04,1.04,0,">1 nonsynonymous","N4D N13V P149K",3
"lib2","SARS-CoV-2","AAACCCCCCTTTCAGG",19,218.19,10.65,-0.18,0.04,2.95,1.06,0,">1 nonsynonymous","V37N D98N L183I",3
"lib2","SARS-CoV-2","AAACCCCCGCACAGCT",5,27.4,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S45K D112F P149E",3
"lib2","SARS-CoV-2","AAACCCCCGCTCCCAT",1,39.81,10.85,0.01,0.03,2.99,1,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","AAACCCCGAAATTTAG",2,42.14,8.66,-2.18,0.07,2.82,1.04,0,">1 nonsynonymous","L57F G166C",2
"lib2","SARS-CoV-2","AAACCCCGCCGCAACT",3,130.68,9.7,-1.13,0.04,2.84,1.04,0,">1 nonsynonymous","S41W L125Q",2
"lib2","SARS-CoV-2","AAACCCCGGATTATGC",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M L95R P149I",3
"lib2","SARS-CoV-2","AAACCCCTATTAAAAT",1,55.24,10.86,0.02,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCCCTTAAGGCGT",1,0.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","AAACCCCTTACGCGAG",2,42.91,8.7,-2.14,0.09,2.75,1.05,0,">1 nonsynonymous","T46M R78H Y119L T140R",4
"lib2","SARS-CoV-2","AAACCCGAACTAGAAT",7,32.3,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F62E F70W K87A S113P P133I Q163P",6
"lib2","SARS-CoV-2","AAACCCGAATCGCACA",15,56.77,6,-4.84,1.81,1.5,1.17,0.01,">1 nonsynonymous","V11L G101D",2
"lib2","SARS-CoV-2","AAACCCGACACACACG",1,8.51,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N40I Y91H F99P",3
"lib2","SARS-CoV-2","AAACCCGACAGCTCTG",33,170.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8Q G51C I138L T148L",4
"lib2","SARS-CoV-2","AAACCCGATGGTTCGT",1,28.95,10.35,-0.49,0.11,2.87,1.03,0.01,">1 nonsynonymous","C61E K132R E135M T201S",4
"lib2","SARS-CoV-2","AAACCCGCAATACGTC",2,33.2,10.77,-0.06,0.03,3,1.01,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","AAACCCGCATCCATGA",12,56,6,-4.84,1.22,1.5,1.16,0.01,">1 nonsynonymous","F47S L57S P82L Y91V V115I",5
"lib2","SARS-CoV-2","AAACCCGGCTCTTGAA",5,0.23,NA,NA,NA,NA,NA,NA,"stop","G51I N64* Y123H Y143* K199H",5
"lib2","SARS-CoV-2","AAACCCGTGTAATATT",3,47.28,9.22,-1.62,0.07,2.9,1.13,0,"1 nonsynonymous","G166Q",1
"lib2","SARS-CoV-2","AAACCCTAAAAGGCGT",13,109.55,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","S43C N120C V182N V194I",4
"lib2","SARS-CoV-2","AAACCCTAACGACATT",5,43.94,6.45,-4.39,0.59,1.5,1.19,0.03,">1 nonsynonymous","V11K A18E V52N N107D",4
"lib2","SARS-CoV-2","AAACCCTAATTCCCTA",7,77.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99L N107P L131P P149L P177L K198V",6
"lib2","SARS-CoV-2","AAACCCTATATTTACC",2,19.39,9.49,-1.35,0.27,1.94,1.15,0.02,">1 nonsynonymous","V11G P197W",2
"lib2","SARS-CoV-2","AAACCCTATTTATGAA",8,145.19,10.62,-0.21,0.03,2.91,1.07,0,">1 nonsynonymous","A18Q D97H",2
"lib2","SARS-CoV-2","AAACCCTCAAAAAAAT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","K56Y F70* N157G Q168R",4
"lib2","SARS-CoV-2","AAACCCTCCATAAACA",11,143.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60R Y66M D90Y G172E",4
"lib2","SARS-CoV-2","AAACCCTCGGAAATGT",9,88.4,10.1,-0.73,0.07,2.59,1.03,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","AAACCCTGGTTGAACC",18,132.87,7.47,-3.37,0.2,1.5,1.09,0.01,">1 nonsynonymous","F12T G146F",2
"lib2","SARS-CoV-2","AAACCCTGTTACCTAA",3,8.76,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2S P54T L57V D68W Q144P C150L",6
"lib2","SARS-CoV-2","AAACCCTTCAACTTAA",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23P V115L G155C",3
"lib2","SARS-CoV-2","AAACCCTTCGCCCAAG",5,5.18,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T15I A22T A42S D137L V173T",5
"lib2","SARS-CoV-2","AAACCGAAACTTCTAG",1,2.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","AAACCGAAAGGAATAA",3,175.58,10.18,-0.65,0.04,2.73,1.02,0,"1 nonsynonymous","R136W",1
"lib2","SARS-CoV-2","AAACCGAAATCAAAGA",3,28.62,8.21,-2.62,0.43,1.5,1,0.07,">1 nonsynonymous","T63L V77L N92T R127K P133D V173M",6
"lib2","SARS-CoV-2","AAACCGAAATTTTAGT",4,42.14,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37H F44V T85A T148I F167S",5
"lib2","SARS-CoV-2","AAACCGAACGACTACG",1,6.16,10.43,-0.41,0.25,2.11,1.25,0.02,">1 nonsynonymous","N24F I142V",2
"lib2","SARS-CoV-2","AAACCGAAGTACCAAG",6,56.19,7.59,-3.24,0.26,1.5,1.03,0.02,">1 nonsynonymous","V11H G146M",2
"lib2","SARS-CoV-2","AAACCGAATTAATACA",2,15.41,7.23,-3.61,0.16,2.57,1.09,0.01,">1 nonsynonymous","T3S T15A Y175L T201L",4
"lib2","SARS-CoV-2","AAACCGACATGACTAC",5,51.09,9.29,-1.54,0.09,2.29,1.07,0,">1 nonsynonymous","S36E W106Y Q144T F160S",4
"lib2","SARS-CoV-2","AAACCGACTAAGACGG",2,0.14,NA,NA,NA,NA,NA,NA,"stop","S43* P191T S200K",3
"lib2","SARS-CoV-2","AAACCGAGAAATTTAG",1,2.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167M",1
"lib2","SARS-CoV-2","AAACCGAGACGAGGGA",5,11.3,6,-4.84,2,1.5,1.17,0.03,"1 nonsynonymous","K48P",1
"lib2","SARS-CoV-2","AAACCGAGAGGACAAA",11,152.03,10.64,-0.19,0.04,2.96,1.02,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","AAACCGAGATGATAAC",2,18.69,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","N40W N58H G172S",3
"lib2","SARS-CoV-2","AAACCGATACCGTTGC",6,32.41,9.32,-1.51,0.18,1.8,1.05,0.01,">1 nonsynonymous","C61N P96Y",2
"lib2","SARS-CoV-2","AAACCGATATATAACA",8,39.99,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C49D D68K D90H L131R Y178L",5
"lib2","SARS-CoV-2","AAACCGATGTTAGAAG",7,61.49,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A22M T85M K114G G166L G174K R179S",6
"lib2","SARS-CoV-2","AAACCGATTGCTAAAA",4,25.78,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","P7Y D112Q Y121S",3
"lib2","SARS-CoV-2","AAACCGATTGCTGCCA",14,91.05,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V37Y K87G V103L W106R V115G R124E A145T",7
"lib2","SARS-CoV-2","AAACCGATTTCCTACC",1,23.88,10.88,0.04,0.23,2.59,1.02,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AAACCGCAACCCCCAC",3,19.15,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","N4L C49F A67Y V77A K87M V173T",6
"lib2","SARS-CoV-2","AAACCGCAATTCTGTT",6,30.65,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","W23V N58K G83E",3
"lib2","SARS-CoV-2","AAACCGCACGAATCAG",6,69.43,6,-4.84,1.91,1.5,1.16,0,">1 nonsynonymous","G9L D112N",2
"lib2","SARS-CoV-2","AAACCGCAGAACTCAG",7,33.35,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","A67S Y91L W106L",3
"lib2","SARS-CoV-2","AAACCGCATCATGCGA",1,60.46,10.08,-0.76,0.09,2.63,1,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","AAACCGCATCCGACGG",2,15.08,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","G86V Y119F Y143F",3
"lib2","SARS-CoV-2","AAACCGCATGTATTAT",1,12.49,9.67,-1.17,0.25,1.5,1.18,0.02,">1 nonsynonymous","L5H W106G",2
"lib2","SARS-CoV-2","AAACCGCCATTGCTCC",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T T55P P82T N92E",4
"lib2","SARS-CoV-2","AAACCGCGATTGGATT",10,105.28,9.45,-1.39,0.07,2.71,1.09,0,">1 nonsynonymous","K56Y E141K G174T",3
"lib2","SARS-CoV-2","AAACCGCGGATATAAC",8,3.86,NA,NA,NA,NA,NA,NA,"stop","V11* S41R",2
"lib2","SARS-CoV-2","AAACCGCTACAATAAC",11,162.12,9.63,-1.2,0.04,2,1.03,0,">1 nonsynonymous","V11K T201V",2
"lib2","SARS-CoV-2","AAACCGCTTATCAAAG",4,106.99,8.47,-2.36,0.11,1.61,1.07,0.01,">1 nonsynonymous","T3H T55L L122T S139V G155E",5
"lib2","SARS-CoV-2","AAACCGGAACTTATCT",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L F167Y",2
"lib2","SARS-CoV-2","AAACCGGACTAGAGGT",6,110.95,10.87,0.04,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCGGAGACAGATG",3,83.77,10.79,-0.05,0.05,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCGGCATAATGAA",3,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R S41C V65E P82F F99L E141I",6
"lib2","SARS-CoV-2","AAACCGGCGGACAACG",5,137.52,8.89,-1.95,0.07,2.45,1.07,0,">1 nonsynonymous","G51N N107H",2
"lib2","SARS-CoV-2","AAACCGGCTTTTAAAG",2,13.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T55I G83T I104G S184M",4
"lib2","SARS-CoV-2","AAACCGGGAACCTGGG",1,9.58,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G101E P161G",2
"lib2","SARS-CoV-2","AAACCGGGCGCATCAT",1,1.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAACCGGGTAGAGTAT",1,24.08,10.72,-0.11,0.07,2.78,1.22,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","AAACCGTAAAGGCTGG",5,16.27,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G83V I88E N107S",3
"lib2","SARS-CoV-2","AAACCGTAATAAAATC",4,20.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N N40I G83C I88G",4
"lib2","SARS-CoV-2","AAACCGTACCTATAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12I V37W G86N I104*",4
"lib2","SARS-CoV-2","AAACCGTAGTAAGGGC",2,19.98,6,-4.84,1.18,1.5,1.26,0.02,">1 nonsynonymous","G86S G152W T201K",3
"lib2","SARS-CoV-2","AAACCGTCACAAATAT",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A89S N120G",3
"lib2","SARS-CoV-2","AAACCGTCCCAAATAA",24,297.41,9.63,-1.21,0.03,2.88,1.09,0,">1 nonsynonymous","V32S Y119K",2
"lib2","SARS-CoV-2","AAACCGTCTAGTAAGG",3,33.52,10.32,-0.52,0.08,2.91,1.02,0,">1 nonsynonymous","F44L G116P A192E",3
"lib2","SARS-CoV-2","AAACCGTCTGACGACT",6,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P T15A A81L N107Q S164A R179A",6
"lib2","SARS-CoV-2","AAACCGTGAATTACAT",4,69.6,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N30H F44K Q84N V103N R136G",5
"lib2","SARS-CoV-2","AAACCGTGCGTTATAC",12,101.84,9.03,-1.81,0.14,1.5,1.13,0.01,">1 nonsynonymous","N64K A105Q",2
"lib2","SARS-CoV-2","AAACCGTGGACCCCAG",9,0.86,NA,NA,NA,NA,NA,NA,"stop","T3C A22K A42* V65P T100W P149*",6
"lib2","SARS-CoV-2","AAACCGTTACATACTG",1,29.72,7.72,-3.11,0.33,1.88,1.08,0.03,">1 nonsynonymous","I2S A105T S113K N120S",4
"lib2","SARS-CoV-2","AAACCGTTCAGCCAGT",3,14.26,8.55,-2.28,0.23,1.85,1.21,0.04,">1 nonsynonymous","N40F V77L S113V",3
"lib2","SARS-CoV-2","AAACCGTTGGCCGAAT",2,32.51,6,-4.84,2,3,1.07,0,">1 nonsynonymous","D90R D112W G166A",3
"lib2","SARS-CoV-2","AAACCGTTTAAATAAT",3,25.54,9.95,-0.89,0.12,2.6,1.06,0.01,">1 nonsynonymous","C6M S41F",2
"lib2","SARS-CoV-2","AAACCTAAAAATGTAA",1,2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131Q",1
"lib2","SARS-CoV-2","AAACCTAAACAAAAAA",4,80.5,9.91,-0.93,0.04,2.98,1.04,0,">1 nonsynonymous","T55L F62N F156M P197S",4
"lib2","SARS-CoV-2","AAACCTAAACCACACT",1,7.68,8.05,-2.78,0.25,2.69,1,0.02,">1 nonsynonymous","N1K G117R S184F",3
"lib2","SARS-CoV-2","AAACCTAAATGGATAA",2,20.83,10.93,0.1,0.07,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCTAACTGACTTA",3,12.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M F99H",2
"lib2","SARS-CoV-2","AAACCTAACTGCTTCA",6,117.62,10.84,0,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCTAAGATGTCTC",15,0.1,NA,NA,NA,NA,NA,NA,"stop","W23T L38S V77L F134V G146* G155Y",6
"lib2","SARS-CoV-2","AAACCTAAGATTTTTC",3,86.43,10.77,-0.07,0.05,2.94,1.08,0,">1 nonsynonymous","K128P T148V",2
"lib2","SARS-CoV-2","AAACCTAATAATCTAT",12,55.6,8.15,-2.68,0.16,1.5,1.11,0.01,">1 nonsynonymous","A22R E135L P149K G174R",4
"lib2","SARS-CoV-2","AAACCTAATCGACCAT",7,44.72,10.81,-0.03,0.07,2.91,1.09,0,"1 nonsynonymous","P149A",1
"lib2","SARS-CoV-2","AAACCTACAAATGGAT",7,72.13,9.87,-0.97,0.03,2.95,1.06,0,">1 nonsynonymous","T100R N118S",2
"lib2","SARS-CoV-2","AAACCTACCATGTACA",13,110.26,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G83W K87M P161I",3
"lib2","SARS-CoV-2","AAACCTACCGGTCAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103T K128D",2
"lib2","SARS-CoV-2","AAACCTAGCATCATTC",1,14.31,7.14,-3.7,0.39,1.54,1.25,0.04,">1 nonsynonymous","T15M N40M Y66R R78H",4
"lib2","SARS-CoV-2","AAACCTAGGAGGTCAC",1,12.55,9.18,-1.66,0.17,2.64,1.03,0.01,">1 nonsynonymous","K94V F156K",2
"lib2","SARS-CoV-2","AAACCTATCAGGACTA",9,230.02,10.75,-0.09,0.03,2.95,1.06,0,"1 nonsynonymous","K114Y",1
"lib2","SARS-CoV-2","AAACCTATCCACACCG",10,121.14,10.85,0.02,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACCTATTTTAAAAT",2,34.63,9.91,-0.93,0.08,2.24,1.03,0,">1 nonsynonymous","D97Q T140L G152K F185L",4
"lib2","SARS-CoV-2","AAACCTCAATTGGGTT",3,24.9,6.26,-4.58,0.79,1.5,1.19,0.04,"1 nonsynonymous","R179A",1
"lib2","SARS-CoV-2","AAACCTCACGCAAAAA",8,21.09,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D34C V103N N171V",3
"lib2","SARS-CoV-2","AAACCTCAGTTGATTA",1,11.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1D C6S C61L G86Y T170H",5
"lib2","SARS-CoV-2","AAACCTCCCCCGACTA",3,1.46,NA,NA,NA,NA,NA,NA,"stop","Y35F N130F C150* V180S",4
"lib2","SARS-CoV-2","AAACCTCCCTACTCTA",1,27.2,10.03,-0.8,0.11,2.6,1.14,0.01,">1 nonsynonymous","I138N Y178S",2
"lib2","SARS-CoV-2","AAACCTCGCCAAGAAG",16,172.55,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F99K G117W L122T G166V",4
"lib2","SARS-CoV-2","AAACCTCTGATATAGT",8,112.39,10.21,-0.63,0.07,2.69,1.15,0,">1 nonsynonymous","S41K N58M N64R",3
"lib2","SARS-CoV-2","AAACCTGAAAGGAGCA",6,1.69,NA,NA,NA,NA,NA,NA,"stop","N107* S139G",2
"lib2","SARS-CoV-2","AAACCTGAAATTCTTG",3,3.96,NA,NA,NA,NA,NA,NA,"stop","Y35I D68K Y91* R127D",4
"lib2","SARS-CoV-2","AAACCTGACGCATAGG",10,156.92,10.06,-0.78,0.04,2.62,1.04,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AAACCTGATCTGGTCT",3,18.31,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C49Y N58H F167T",3
"lib2","SARS-CoV-2","AAACCTGATGTTACCA",7,0.36,NA,NA,NA,NA,NA,NA,"stop","L60M N120* S139L P149C V173H",5
"lib2","SARS-CoV-2","AAACCTGCATACGATT",2,21.87,10.24,-0.6,0.08,2.79,1,0,">1 nonsynonymous","F62S Y91N",2
"lib2","SARS-CoV-2","AAACCTGCCTCGTTTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D P149K",2
"lib2","SARS-CoV-2","AAACCTGCTTCTCAAT",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V37Y F62P G86L F167K",5
"lib2","SARS-CoV-2","AAACCTGGCTCCTCCT",6,3.22,NA,NA,NA,NA,NA,NA,"stop","N64A D90Y N120*",3
"lib2","SARS-CoV-2","AAACCTGGGACGCCCC",5,28.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y39I I88S A105L S200P",4
"lib2","SARS-CoV-2","AAACCTGTCGATAAGT",3,28.45,10.68,-0.15,0.08,2.9,1.06,0,">1 nonsynonymous","S41H N64W",2
"lib2","SARS-CoV-2","AAACCTTAACACAAAT",2,9.92,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A22T L60F N107W Q176L",4
"lib2","SARS-CoV-2","AAACCTTAACCCCTCT",13,110.46,10.71,-0.12,0.03,2.95,1.05,0,"1 nonsynonymous","S164V",1
"lib2","SARS-CoV-2","AAACCTTAGAACACGA",2,27.4,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K56C P82V A105Y",3
"lib2","SARS-CoV-2","AAACCTTAGCTAAAGA",7,0.25,NA,NA,NA,NA,NA,NA,"stop","R27C T170*",2
"lib2","SARS-CoV-2","AAACCTTAGTAGGTTA",12,236.41,10.81,-0.03,0.04,2.95,1.07,0,">1 nonsynonymous","T55Q C195R",2
"lib2","SARS-CoV-2","AAACCTTCACCTCAGG",1,0.18,NA,NA,NA,NA,NA,NA,"stop","A18*",1
"lib2","SARS-CoV-2","AAACCTTCCAGCGGAT",1,2.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","AAACCTTTAAAGGCTT",9,285.67,9.31,-1.52,0.05,2.68,1.1,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","AAACCTTTTAAATACT",7,54.3,6.24,-4.59,0.28,2.17,1.14,0,">1 nonsynonymous","F44R N58T V65M D90I N110D I138S F160L",7
"lib2","SARS-CoV-2","AAACGAAAAAACTAAT",4,17.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","E10V P96L C158A",3
"lib2","SARS-CoV-2","AAACGAAAAATCGATC",8,17.35,NA,NA,NA,NA,NA,NA,"stop","N1L Y35* D112T",3
"lib2","SARS-CoV-2","AAACGAAAAGAGCATA",2,56.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2Y F70R D90N C102H F134L H189V",6
"lib2","SARS-CoV-2","AAACGAAAAGTTACCA",8,31.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","W106S A145N V173P",3
"lib2","SARS-CoV-2","AAACGAAAATGCTCGT",1,83.53,10.03,-0.81,0.04,2.71,1.1,0,">1 nonsynonymous","F44V L60A N120H",3
"lib2","SARS-CoV-2","AAACGAAACACTACAA",2,61.93,9.22,-1.62,0.05,2.97,1.12,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","AAACGAAACCACGATT",4,1.85,NA,NA,NA,NA,NA,NA,"stop","I138N P149S G174* V181S",4
"lib2","SARS-CoV-2","AAACGAAACCGCAGGC",1,0.38,NA,NA,NA,NA,NA,NA,"stop","D98L W106I N120P R127*",4
"lib2","SARS-CoV-2","AAACGAAACGGTCGCC",3,24.02,9.48,-1.36,0.09,2.19,1.03,0,">1 nonsynonymous","P133C E141F",2
"lib2","SARS-CoV-2","AAACGAAACTAAAACT",4,59.1,10.67,-0.17,0.05,2.93,1.04,0,">1 nonsynonymous","K128T V180I",2
"lib2","SARS-CoV-2","AAACGAAACTTCCGAT",3,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43M V181P",2
"lib2","SARS-CoV-2","AAACGAAAGACTTCAG",2,13.49,10.08,-0.75,0.15,2.83,1,0.01,">1 nonsynonymous","A14R V182I",2
"lib2","SARS-CoV-2","AAACGAAAGATAAACG",3,51.04,9.22,-1.61,0.08,2.61,1.06,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","AAACGAAATACTCGCG",4,8.15,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A33R D98Y G101N P149M Q168I",5
"lib2","SARS-CoV-2","AAACGAAATCCGAAAG",4,68.37,6,-4.84,2,1.5,1.11,0,"1 nonsynonymous","Q176P",1
"lib2","SARS-CoV-2","AAACGAAATGAACCGC",10,7.43,NA,NA,NA,NA,NA,NA,"stop","F17* L57F N130L",3
"lib2","SARS-CoV-2","AAACGAACACTAGGTA",6,4.58,NA,NA,NA,NA,NA,NA,"stop","I2F Y91*",2
"lib2","SARS-CoV-2","AAACGAACATCAAAAT",8,126.01,10.08,-0.75,0.06,2.63,1.1,0,">1 nonsynonymous","A105Y T140S",2
"lib2","SARS-CoV-2","AAACGAACCAACTGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K94* T170* Y175T",3
"lib2","SARS-CoV-2","AAACGAACCCTTTAAG",5,69.78,7.58,-3.26,0.25,1.5,1.05,0.02,">1 nonsynonymous","R16S L95P",2
"lib2","SARS-CoV-2","AAACGAACGCTTATAC",9,42.52,6.05,-4.78,1.12,1.5,1.13,0.03,">1 nonsynonymous","A14T K87E A105Y L122E L131K P161H",6
"lib2","SARS-CoV-2","AAACGAACTTATTGTG",1,2.68,NA,NA,NA,NA,NA,NA,"stop","T15Q L57* K87G T148I",4
"lib2","SARS-CoV-2","AAACGAAGAAAAGTCA",2,13.58,10.76,-0.08,0.09,2.81,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGAAGAACCCGGA",11,1.47,NA,NA,NA,NA,NA,NA,"stop","T100* N118V",2
"lib2","SARS-CoV-2","AAACGAAGCACATGGA",11,122.15,9.59,-1.24,0.05,1.97,1.05,0,">1 nonsynonymous","V11C I104Y",2
"lib2","SARS-CoV-2","AAACGAAGCCCATAAA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","C49K A81V G86* K94N Q176I T201L",6
"lib2","SARS-CoV-2","AAACGAAGCTCTAGTT",9,37.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I88P K94R",2
"lib2","SARS-CoV-2","AAACGAATATAATAAT",7,64.77,10.17,-0.67,0.06,2.72,1.04,0,">1 nonsynonymous","A105T Q144H",2
"lib2","SARS-CoV-2","AAACGAATCAAACATA",1,47.35,9.31,-1.53,0.15,1.59,1.03,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","AAACGAATCAGAGGAG",15,4.19,NA,NA,NA,NA,NA,NA,"stop","S45* K94N S164F",3
"lib2","SARS-CoV-2","AAACGAATGTTCTAAC",6,69.03,10.93,0.09,0.08,2.92,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACGAATTAAGAGTT",6,36.81,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","W106G L125P E141I",3
"lib2","SARS-CoV-2","AAACGAATTAATTTTA",7,128.29,10.79,-0.05,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGAATTGTCATCA",4,1.38,NA,NA,NA,NA,NA,NA,"stop","G9L S45* V153T",3
"lib2","SARS-CoV-2","AAACGACAAACTCAAC",9,115.68,10.86,0.02,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGACAAAGGCTTA",2,12.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I V77K Y93Q T148M",4
"lib2","SARS-CoV-2","AAACGACAGTAAAGAC",1,17.51,9.84,-1,0.16,2.2,1.11,0.02,">1 nonsynonymous","A33V F62L D90V",3
"lib2","SARS-CoV-2","AAACGACCATCCTCTA",1,9.66,9.72,-1.12,0.16,1.93,1.09,0.01,">1 nonsynonymous","T15W L57M",2
"lib2","SARS-CoV-2","AAACGACCATTTGATT",1,7.89,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R25W C49R",2
"lib2","SARS-CoV-2","AAACGACGCAGTCAGA",1,26.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L60T V153Y P161C",3
"lib2","SARS-CoV-2","AAACGACGTAGGCCAA",14,77.73,6,-4.84,0.61,1.5,1.18,0,">1 nonsynonymous","Y39H A105P S113L T140S",4
"lib2","SARS-CoV-2","AAACGACTAAAACCTG",8,33.7,10.73,-0.11,0.04,3,1.02,0,">1 nonsynonymous","K87T H189G",2
"lib2","SARS-CoV-2","AAACGACTAAGCGGGA",16,178.45,6,-4.84,0.88,1.5,1.13,0,">1 nonsynonymous","T15S D68T I142K",3
"lib2","SARS-CoV-2","AAACGACTCTATCTAA",2,97.52,10.78,-0.06,0.03,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGACTTGTACTCA",1,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C Y35E",2
"lib2","SARS-CoV-2","AAACGAGAACATTGGG",2,15.75,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","L60V Y93L G116I",3
"lib2","SARS-CoV-2","AAACGAGAACGCACAA",4,55.58,10.47,-0.36,0.05,2.88,1.07,0,">1 nonsynonymous","T46V L187P P191K",3
"lib2","SARS-CoV-2","AAACGAGACAATGTTA",2,25.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40T G101N N107C",3
"lib2","SARS-CoV-2","AAACGAGACGCTTTAA",2,0.62,NA,NA,NA,NA,NA,NA,"stop","S19P L57M Q84* N118F N130Q R136F",6
"lib2","SARS-CoV-2","AAACGAGATTCAAACT",2,23.74,6,-4.84,0.99,3,1.12,0,">1 nonsynonymous","D98Y C102G",2
"lib2","SARS-CoV-2","AAACGAGCCATCAGTT",2,36.42,10.73,-0.1,0.03,2.92,1.1,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","AAACGAGCGATCTCCC",10,103.47,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","L5V K26P V52A D68V",4
"lib2","SARS-CoV-2","AAACGAGGCAAAGGAG",15,74.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10G L60R V65S S113R T170R",5
"lib2","SARS-CoV-2","AAACGAGGCGTACGGC",2,106.87,10.5,-0.34,0.05,2.91,1.11,0,">1 nonsynonymous","G9H S147C",2
"lib2","SARS-CoV-2","AAACGAGGGAACAGTA",8,129.6,9.77,-1.06,0.07,2.33,1.07,0,">1 nonsynonymous","C61Y A105W P149N T201Y",4
"lib2","SARS-CoV-2","AAACGAGGTGTGGTCG",2,0.06,NA,NA,NA,NA,NA,NA,"stop","I138L V173*",2
"lib2","SARS-CoV-2","AAACGAGTAAATTCAC",16,7.51,NA,NA,NA,NA,NA,NA,"stop","D98T P149R G166* V173L Q176G",5
"lib2","SARS-CoV-2","AAACGAGTTATTACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A Y21R Y121V P149W Y175M",5
"lib2","SARS-CoV-2","AAACGATAAACAAACA",2,27.82,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","V37R I88R Q168D",3
"lib2","SARS-CoV-2","AAACGATACACTGCCG",1,91.63,9.39,-1.45,0.08,2.6,1.04,0,">1 nonsynonymous","G9R N107Q",2
"lib2","SARS-CoV-2","AAACGATACTGAATTG",3,23.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6S I88Y L122S S129R",4
"lib2","SARS-CoV-2","AAACGATCACCTAGGA",6,94.19,10.18,-0.65,0.07,2.66,1.08,0,">1 nonsynonymous","T100E E141F",2
"lib2","SARS-CoV-2","AAACGATCCCCAATCT",2,29.54,8.19,-2.65,0.17,1.81,1.11,0.01,">1 nonsynonymous","I72L D112V",2
"lib2","SARS-CoV-2","AAACGATCGCGTACTT",1,24.95,11.05,0.22,0.08,2.9,1.1,0,">1 nonsynonymous","N64S L122Q",2
"lib2","SARS-CoV-2","AAACGATGATATACTG",1,47.57,9.33,-1.5,0.1,2.09,1.05,0,">1 nonsynonymous","C6D F12I S36L I80V",4
"lib2","SARS-CoV-2","AAACGATTAACGCAAA",9,2.7,NA,NA,NA,NA,NA,NA,"stop","K56T V173*",2
"lib2","SARS-CoV-2","AAACGATTAGACGGAC",2,34.49,10.7,-0.14,0.05,2.98,1.05,0,">1 nonsynonymous","N4H N151S",2
"lib2","SARS-CoV-2","AAACGATTAGTAGCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F N58T",2
"lib2","SARS-CoV-2","AAACGATTTTTAAACA",4,177.21,8.51,-2.33,0.12,1.82,1.11,0.01,">1 nonsynonymous","I2V N118S S129F P133Q F160K",5
"lib2","SARS-CoV-2","AAACGCAAAAATAAGA",2,35.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C49P T85R T140A Y165H",4
"lib2","SARS-CoV-2","AAACGCAAATATTCAA",6,45.33,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T3I L60G A89G G172L",4
"lib2","SARS-CoV-2","AAACGCAACTGCGAGT",5,35.44,10.87,0.04,0.08,2.93,1.08,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","AAACGCAATACATGCA",4,58.13,10.87,0.04,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGCAATATTAACT",1,10.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1Q V37F W106D I142S",4
"lib2","SARS-CoV-2","AAACGCACGTAATATA",1,6.77,10.49,-0.35,0.15,2.89,1.15,0.01,">1 nonsynonymous","Y39F T63D D98M I142V",4
"lib2","SARS-CoV-2","AAACGCAGAACGCGGA",6,12.52,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6Y P149A L183A",3
"lib2","SARS-CoV-2","AAACGCAGAAGCTCCT",3,79.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14K L38D C61S G83C A145E R179K",6
"lib2","SARS-CoV-2","AAACGCAGGTACGCAA",8,79.71,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F99D W106Y",2
"lib2","SARS-CoV-2","AAACGCATATCTATGA",3,0,NA,NA,NA,NA,NA,NA,"stop","E10L C49T D59F D97Y R124*",5
"lib2","SARS-CoV-2","AAACGCATTTATTACT",1,5.8,10.89,0.06,0.1,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGCCACTAATAAG",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23D T85R Y93W W106L Y119F",5
"lib2","SARS-CoV-2","AAACGCCCTTACGGTT",6,67.26,8.92,-1.92,0.14,1.5,1.11,0.01,">1 nonsynonymous","A14V A105C",2
"lib2","SARS-CoV-2","AAACGCCGCTCACAAT",5,46.53,6.81,-4.02,0.36,1.5,1.14,0.02,">1 nonsynonymous","P7L D97L Y119L G152Y",4
"lib2","SARS-CoV-2","AAACGCCGCTCGACAA",9,216.38,9.11,-1.72,0.04,2.84,1.13,0,">1 nonsynonymous","N4D N118S V173G",3
"lib2","SARS-CoV-2","AAACGCCTAAAAAACT",2,31.24,7.65,-3.18,0.14,2.04,1.14,0.01,">1 nonsynonymous","Y35W P133K G172S",3
"lib2","SARS-CoV-2","AAACGCCTACCGGTAG",1,60.4,10.77,-0.06,0.02,2.98,1.02,0,">1 nonsynonymous","Y35I D59L",2
"lib2","SARS-CoV-2","AAACGCCTTCACTACG",9,100.37,6,-4.84,1.74,1.5,1.12,0,">1 nonsynonymous","R16V W23L G101E",3
"lib2","SARS-CoV-2","AAACGCCTTGCAAATA",1,29.38,10.31,-0.53,0.09,2.87,1.02,0,">1 nonsynonymous","E141Y V153G V173Q",3
"lib2","SARS-CoV-2","AAACGCCTTTTATTAC",1,18.88,10.7,-0.14,0.09,2.98,1.07,0,"1 nonsynonymous","Y123V",1
"lib2","SARS-CoV-2","AAACGCGACCTTGCCA",5,10.26,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y21N V37M K48R D68E D97Y C150L F167R",7
"lib2","SARS-CoV-2","AAACGCGCCGGTACGA",2,5.53,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G83S R124S K132Q S139A K199S",5
"lib2","SARS-CoV-2","AAACGCGGAAATTCAG",3,60.11,10.27,-0.57,0.1,2.54,1.07,0,">1 nonsynonymous","Y39R E76A",2
"lib2","SARS-CoV-2","AAACGCGGCTCACCTG",7,110.45,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G51H A81L T170V Y175Q",4
"lib2","SARS-CoV-2","AAACGCGGGAACTCAG",4,0.23,NA,NA,NA,NA,NA,NA,"stop","T85K L122*",2
"lib2","SARS-CoV-2","AAACGCTAAATTAAAT",11,198.9,10.84,0,0.04,2.9,1.05,0,"1 nonsynonymous","E141A",1
"lib2","SARS-CoV-2","AAACGCTAACTACGAA",8,1.11,NA,NA,NA,NA,NA,NA,"stop","G9* K87* P149Y Q168I",4
"lib2","SARS-CoV-2","AAACGCTAATTAGCCG",10,89.18,8.01,-2.83,0.17,1.5,1.1,0.01,">1 nonsynonymous","F44M A105G E141F",3
"lib2","SARS-CoV-2","AAACGCTAGGATTTAT",9,41.53,9.97,-0.87,0.06,2.72,1.13,0,">1 nonsynonymous","F12V F47I L183I T201L",4
"lib2","SARS-CoV-2","AAACGCTATTATTACA",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D34Y L60A N92V S129P I138Y P149V Q176V",8
"lib2","SARS-CoV-2","AAACGCTCAACATAGT",9,20.18,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103R T170G",2
"lib2","SARS-CoV-2","AAACGCTCATTCTAAG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","D97C A105* S139F E154I",4
"lib2","SARS-CoV-2","AAACGCTCCTACAGCC",1,13.81,7.78,-3.05,0.21,1.56,1.08,0.02,">1 nonsynonymous","E10V K56V T63P Y119K",4
"lib2","SARS-CoV-2","AAACGCTGATCGAGAC",8,3.07,NA,NA,NA,NA,NA,NA,"stop","N30S D98* Y123T",3
"lib2","SARS-CoV-2","AAACGCTTAATACACG",2,13.74,6.3,-4.54,1.23,2.17,1.12,0,">1 nonsynonymous","P7V N13P P169L",3
"lib2","SARS-CoV-2","AAACGCTTAGTAGAAA",1,15.21,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N107P K114W G172S T201R",4
"lib2","SARS-CoV-2","AAACGCTTCCTTAAAA",6,65.45,10.64,-0.2,0.08,2.86,1.1,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","AAACGCTTTTATCTGA",5,49.98,10.75,-0.08,0.1,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGGACCTATAGTG",3,93.11,10.17,-0.67,0.12,2.45,1.03,0,">1 nonsynonymous","Y35T L57M Y123M",3
"lib2","SARS-CoV-2","AAACGGACGAAAGTAC",3,19.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13K F62R E135L N151S",4
"lib2","SARS-CoV-2","AAACGGACGTAATCCT",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A Y143S",2
"lib2","SARS-CoV-2","AAACGGACTTACACCA",7,206.04,10.36,-0.48,0.04,2.85,1.07,0,">1 nonsynonymous","G9W G155M",2
"lib2","SARS-CoV-2","AAACGGAGATCCCGCC",14,184.27,10.05,-0.78,0.07,2.59,1.08,0,">1 nonsynonymous","L5R G83I",2
"lib2","SARS-CoV-2","AAACGGAGCGTTACCG",1,28.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44R G86N D90P P177L",4
"lib2","SARS-CoV-2","AAACGGATAGTATAAA",1,10.66,6,-4.84,0.5,3,1.01,0,">1 nonsynonymous","Y123I R179M",2
"lib2","SARS-CoV-2","AAACGGCAAGGAAATA",3,11.18,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","K94A L183Y",2
"lib2","SARS-CoV-2","AAACGGCAATGTTCAA",6,192.74,10.85,0.01,0.05,2.88,1.11,0,"1 nonsynonymous","R136K",1
"lib2","SARS-CoV-2","AAACGGCATTACGACA",10,158.73,10.42,-0.41,0.04,2.92,1.06,0,">1 nonsynonymous","T148F F160L",2
"lib2","SARS-CoV-2","AAACGGCCAAACCTAG",2,69.33,10.26,-0.58,0.05,2.83,1.03,0,"1 nonsynonymous","E135Y",1
"lib2","SARS-CoV-2","AAACGGCGACACCTGC",9,131.3,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I80S Y119M G174N",3
"lib2","SARS-CoV-2","AAACGGCGTTCACTGG",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S A18I S53V Y119G P149R P161R",6
"lib2","SARS-CoV-2","AAACGGGCACAATGTA",3,9.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P7I G86K V103P L122K",4
"lib2","SARS-CoV-2","AAACGGGCCCACCCTC",10,2.19,NA,NA,NA,NA,NA,NA,"stop","I2* V11P V20L S45P N118S",5
"lib2","SARS-CoV-2","AAACGGGCTACGAGTT",1,10.39,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F99R P149L",2
"lib2","SARS-CoV-2","AAACGGGGAACATAAA",11,66.55,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F70V G86D Y119W T201I",4
"lib2","SARS-CoV-2","AAACGGGGACAGATCC",8,115.94,10.84,0.01,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGGTAAACCCATC",11,58.81,6.28,-4.55,0.68,1.5,1.24,0.03,">1 nonsynonymous","P7R N40S F70L",3
"lib2","SARS-CoV-2","AAACGGTAACGCAAGT",7,115.19,9.35,-1.48,0.12,1.87,1.06,0.01,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","AAACGGTCATAATGGG",1,20.21,10.08,-0.75,0.1,2.87,1.06,0,">1 nonsynonymous","T85M T140W T201S",3
"lib2","SARS-CoV-2","AAACGGTCCGGAGATT",1,5.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107V Q163N",2
"lib2","SARS-CoV-2","AAACGGTGGGTGACTT",9,70.67,10.23,-0.61,0.07,2.65,1,0,">1 nonsynonymous","T3L T15S T140K L183V",4
"lib2","SARS-CoV-2","AAACGGTGTTAAGACA",7,69.87,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G9M L95T N120H K128A G155S P161Y V194P",7
"lib2","SARS-CoV-2","AAACGGTTCAAAATTA",2,9.56,8.59,-2.24,0.13,2.94,1.01,0.01,">1 nonsynonymous","F160A G166D",2
"lib2","SARS-CoV-2","AAACGGTTGTACAAAA",2,0.81,NA,NA,NA,NA,NA,NA,"stop","F12I I138* C158K Q168Y",4
"lib2","SARS-CoV-2","AAACGGTTGTTATTAT",5,17.8,9.66,-1.17,0.18,1.89,1.08,0.01,">1 nonsynonymous","Y50S T55Y",2
"lib2","SARS-CoV-2","AAACGGTTTTTTTATG",3,45.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2H G9F F62N Y93S",4
"lib2","SARS-CoV-2","AAACGTAAAATGTACT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I72L A81* N151L T170Q",4
"lib2","SARS-CoV-2","AAACGTAAAGAACTCA",7,59.99,8.88,-1.95,0.22,1.5,1.07,0.02,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","AAACGTAAATTTTTTA",14,98.52,6.07,-4.77,0.77,1.5,1.23,0.01,">1 nonsynonymous","A105D A145S",2
"lib2","SARS-CoV-2","AAACGTAACACTACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98W Y123T T201C",3
"lib2","SARS-CoV-2","AAACGTAAGAATAATT",6,104.33,9.81,-1.03,0.03,2.79,1.03,0,">1 nonsynonymous","F8V G166N",2
"lib2","SARS-CoV-2","AAACGTAAGGGCGCTG",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R G86L A105E",3
"lib2","SARS-CoV-2","AAACGTAAGTGAGAAA",1,10.07,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R179P",1
"lib2","SARS-CoV-2","AAACGTACAACCCAAC",6,117.81,10.01,-0.83,0.07,2.73,1.04,0,">1 nonsynonymous","L38I Q144W",2
"lib2","SARS-CoV-2","AAACGTACAAGGTTAG",8,95.72,10.56,-0.28,0.06,2.94,1.06,0,">1 nonsynonymous","F62S K87F",2
"lib2","SARS-CoV-2","AAACGTACCTAGTCTA",1,8.62,6,-4.84,2,3,1.3,0.02,">1 nonsynonymous","T15V N107Y S200W",3
"lib2","SARS-CoV-2","AAACGTACTTGAAAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72M T140Q Y159M",3
"lib2","SARS-CoV-2","AAACGTAGAGGCATAA",1,32.31,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C6I C61N W106T Y121L S129I",5
"lib2","SARS-CoV-2","AAACGTAGGGGAGGCG",7,13.51,NA,NA,NA,NA,NA,NA,"stop","N58R Q84D Y119* T170I",4
"lib2","SARS-CoV-2","AAACGTATACAACGTT",5,22.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P54Q W106A P133E",3
"lib2","SARS-CoV-2","AAACGTATAGTGCAAG",8,59.24,10.75,-0.09,0.06,2.91,1.11,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","AAACGTATATAAGGAC",5,23.98,6,-4.84,0.98,3,1.19,0.01,">1 nonsynonymous","S113I I138W N151V Y178C",4
"lib2","SARS-CoV-2","AAACGTATATACCCCC",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R P96D V182L",3
"lib2","SARS-CoV-2","AAACGTATCAACACCC",1,7.13,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C49Y A81V",2
"lib2","SARS-CoV-2","AAACGTATCCCGATCT",6,34.29,9.9,-0.93,0.09,2.44,1.08,0,">1 nonsynonymous","S45M Q163W",2
"lib2","SARS-CoV-2","AAACGTATCCCGTTCC",1,59.43,10.06,-0.78,0.05,2.92,1,0,">1 nonsynonymous","C31E N40Q",2
"lib2","SARS-CoV-2","AAACGTATCTTAACGA",5,0.73,NA,NA,NA,NA,NA,NA,"stop","N92* P133G P149T",3
"lib2","SARS-CoV-2","AAACGTATGTTTATAG",14,4.23,NA,NA,NA,NA,NA,NA,"stop","S19* T55G K128S P177R",4
"lib2","SARS-CoV-2","AAACGTATTACAACGC",9,31.52,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","D34E N40P L57Y A89W",4
"lib2","SARS-CoV-2","AAACGTATTTTGGGGT",1,14.56,6.01,-4.83,0.49,3,1.08,0,">1 nonsynonymous","L5R G86I K199T",3
"lib2","SARS-CoV-2","AAACGTCAAACTATAA",1,10.16,10.2,-0.63,0.17,2.52,1.05,0.01,"1 nonsynonymous","F12W",1
"lib2","SARS-CoV-2","AAACGTCAATAAAGCA",13,90.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","AAACGTCACGCCTCAC",1,1.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","AAACGTCAGCATCATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180A",1
"lib2","SARS-CoV-2","AAACGTCCCACACAAC",2,29.88,10.29,-0.55,0.06,2.83,1.11,0,">1 nonsynonymous","C6S P197K",2
"lib2","SARS-CoV-2","AAACGTCTCAACAAAA",2,61.85,7.19,-3.65,0.24,1.5,1.15,0.01,">1 nonsynonymous","N40D S113Y K128L",3
"lib2","SARS-CoV-2","AAACGTCTTCTCTGAA",6,0.12,NA,NA,NA,NA,NA,NA,"stop","C6* A14E D97R Y119S I142V",5
"lib2","SARS-CoV-2","AAACGTCTTGAATTAC",5,187.32,9.07,-1.77,0.05,2.92,1.08,0,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","AAACGTGAACCAACCA",7,113.15,10.96,0.12,0.05,2.94,1.06,0,"1 nonsynonymous","N109R",1
"lib2","SARS-CoV-2","AAACGTGACCTAGTTG",11,2.85,NA,NA,NA,NA,NA,NA,"stop","F12* F44L C61S G146V",4
"lib2","SARS-CoV-2","AAACGTGCGCTAACAG",4,24.99,10.11,-0.73,0.07,2.83,1.14,0,">1 nonsynonymous","F134W N151L T170Q",3
"lib2","SARS-CoV-2","AAACGTGGATACAAGA",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105C Y119S T170S",3
"lib2","SARS-CoV-2","AAACGTTAGCTCTATT",2,65.03,10.26,-0.58,0.06,2.76,1.05,0,">1 nonsynonymous","V77M A190F",2
"lib2","SARS-CoV-2","AAACGTTATAACCGCC",27,173.18,9.59,-1.25,0.06,1.88,1.08,0,">1 nonsynonymous","K56Y Y91F K132W G152K",4
"lib2","SARS-CoV-2","AAACGTTATGGCCAAA",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S36H A89N N171P",4
"lib2","SARS-CoV-2","AAACGTTCACTATCTG",13,233.29,10.16,-0.68,0.03,2.9,1.07,0,">1 nonsynonymous","K26R G155Y K199S",3
"lib2","SARS-CoV-2","AAACGTTCCTAAACTT",5,63.2,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","P82L P149Y Y178I",3
"lib2","SARS-CoV-2","AAACGTTGCAATGTAA",11,116.03,10.86,0.03,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACGTTTAGGAGCGG",2,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V V71K D98N K114S N151M Q176T",6
"lib2","SARS-CoV-2","AAACGTTTGCGCAAGT",7,55.09,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S69W L95G",2
"lib2","SARS-CoV-2","AAACTAAAAAAATAAA",5,111.75,10.06,-0.77,0.04,2.78,1.12,0,">1 nonsynonymous","D59C T85C K198E",3
"lib2","SARS-CoV-2","AAACTAAAAAGAAAGC",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L G117F L183H",3
"lib2","SARS-CoV-2","AAACTAAAACATAACA",2,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F S69K",2
"lib2","SARS-CoV-2","AAACTAAAACTATGTC",9,94.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D75E N110W R124C P149K",4
"lib2","SARS-CoV-2","AAACTAAAAGGTCCCA",9,116.73,9.25,-1.59,0.09,2.56,1.11,0,">1 nonsynonymous","I2E Y121P K128Q",3
"lib2","SARS-CoV-2","AAACTAAAATAAATAT",4,22.59,10.66,-0.18,0.09,2.79,1.17,0,">1 nonsynonymous","G83S S200Q",2
"lib2","SARS-CoV-2","AAACTAAAATCTTCAG",3,14.07,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D34T F47H S53F T100A D112S",5
"lib2","SARS-CoV-2","AAACTAAAATTACAAA",7,144.48,10.36,-0.47,0.03,2.98,1.01,0,">1 nonsynonymous","D90S P169K",2
"lib2","SARS-CoV-2","AAACTAAACCACCTTT",10,286.59,10.84,0,0.04,2.9,1.1,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","AAACTAAAGCTGTTGG",11,140.84,7.28,-3.56,0.21,1.5,1.17,0.01,">1 nonsynonymous","V20S L60A E141P",3
"lib2","SARS-CoV-2","AAACTAAATGTCGAGT",13,211.96,10.1,-0.74,0.07,2.41,1.02,0,">1 nonsynonymous","T15N T46M I104L K114F Y175W",5
"lib2","SARS-CoV-2","AAACTAAATTAGTTCA",5,34.33,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","P96R L131R P177Q",3
"lib2","SARS-CoV-2","AAACTAACCTAAGCTA",2,9.21,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","R25S A33R I88R R127V E141R",5
"lib2","SARS-CoV-2","AAACTAACCTAATGGA",19,50.05,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","L5M F12N L57V L95W S164Y P197V",6
"lib2","SARS-CoV-2","AAACTAACCTAGGTGG",1,37.61,9.67,-1.17,0.13,2.21,1.06,0.01,">1 nonsynonymous","P96E N120G",2
"lib2","SARS-CoV-2","AAACTAACTCAAAAGA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","T15W Y39F Q84* D90H",4
"lib2","SARS-CoV-2","AAACTAACTTTAATCG",4,121.83,10.1,-0.73,0.09,2.56,1.04,0,">1 nonsynonymous","V52Y Q84L",2
"lib2","SARS-CoV-2","AAACTAAGAACCATAC",5,32.21,10.74,-0.1,0.05,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACTAAGAAGGCCTA",5,37.27,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S41E D68Q N120K R136L F156H P161Y Y178N",7
"lib2","SARS-CoV-2","AAACTAAGAATAACCT",4,0,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","AAACTAAGAATAGGGT",3,36.54,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","E10V N58Y G86Y I104L T148I N157Y",6
"lib2","SARS-CoV-2","AAACTAAGACCCTTTA",7,86.06,7.91,-2.93,0.16,1.59,1.16,0.01,"1 nonsynonymous","G172C",1
"lib2","SARS-CoV-2","AAACTAAGCCCCCTAA",15,74.4,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","I72K N92M N120Y P161L",4
"lib2","SARS-CoV-2","AAACTAAGTGGACAAC",1,11.23,10.47,-0.37,0.18,2.57,1,0.01,">1 nonsynonymous","G51M F156V T201D",3
"lib2","SARS-CoV-2","AAACTAATACACACTT",9,161,10.23,-0.61,0.04,2.84,1.04,0,">1 nonsynonymous","T3F K114L A190F",3
"lib2","SARS-CoV-2","AAACTAATACATCTAC",5,20.35,7.09,-3.75,0.27,1.5,1.12,0.02,">1 nonsynonymous","A14S V37M R73N N120T",4
"lib2","SARS-CoV-2","AAACTAATAGAAGATT",13,168.54,6,-4.84,1.56,1.5,1.24,0.03,">1 nonsynonymous","Y39M A81I K128L G174T E186K",5
"lib2","SARS-CoV-2","AAACTAATAGACCTTA",2,57.42,10.81,-0.03,0.05,2.98,1.04,0,"1 nonsynonymous","V173H",1
"lib2","SARS-CoV-2","AAACTAATAGTATTTC",1,47.93,10.17,-0.67,0.05,2.77,1.04,0,">1 nonsynonymous","D59L G116V",2
"lib2","SARS-CoV-2","AAACTAATATACCCAA",14,38.45,8.13,-2.71,0.11,1.5,1.05,0.01,">1 nonsynonymous","F8A D98G E141I",3
"lib2","SARS-CoV-2","AAACTAATCATACAGA",8,93.63,9.17,-1.66,0.06,2.92,1.11,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","AAACTAATCCGAATCA",9,103.51,10.73,-0.11,0.06,2.83,1.17,0,"1 nonsynonymous","K48T",1
"lib2","SARS-CoV-2","AAACTAATCTATACCT",8,167.66,8.78,-2.05,0.07,2.72,1.12,0,">1 nonsynonymous","L5E E10Y S43L N120T",4
"lib2","SARS-CoV-2","AAACTAATGCTGATGG",6,20.55,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S19L R27F P82F S164L",4
"lib2","SARS-CoV-2","AAACTAATGTTGTCAT",15,747.8,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L5S P96T V181F",3
"lib2","SARS-CoV-2","AAACTAATTGTGGGGC",3,21.7,10.36,-0.47,0.07,2.84,1,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","AAACTACAAAAATTCA",4,34.93,6.72,-4.11,0.62,1.5,1.27,0.04,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","AAACTACAAAACCGCT",2,16.15,6.81,-4.03,0.5,2.08,1.2,0.03,">1 nonsynonymous","W23A L95A",2
"lib2","SARS-CoV-2","AAACTACAAGTATTAT",4,61.5,10.9,0.06,0.07,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAACTACAATGCAAAA",5,78.48,9.17,-1.67,0.07,2.93,1.11,0,">1 nonsynonymous","T170L T201M",2
"lib2","SARS-CoV-2","AAACTACACCAAACAA",3,30.25,10.44,-0.4,0.08,2.76,1.07,0,">1 nonsynonymous","Y39C S139R",2
"lib2","SARS-CoV-2","AAACTACACCCTACAA",7,84,10.69,-0.14,0.05,2.96,1.05,0,">1 nonsynonymous","L60Q D98T",2
"lib2","SARS-CoV-2","AAACTACATTGCAATA",1,6.17,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","V103S K128A",2
"lib2","SARS-CoV-2","AAACTACCAACCAGCA",7,113.41,10.8,-0.03,0.05,2.94,1.07,0,"1 nonsynonymous","V173E",1
"lib2","SARS-CoV-2","AAACTACCCACCGGAC",10,148.66,9.43,-1.41,0.13,1.74,1.07,0.01,">1 nonsynonymous","V11S A18Y S129L",3
"lib2","SARS-CoV-2","AAACTACGAAGATGGA",9,99.16,10.31,-0.52,0.05,2.8,1,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","AAACTACGACGGAATG",10,194.67,9.67,-1.16,0.04,2.87,1.06,0,">1 nonsynonymous","C6S K87R Q168S",3
"lib2","SARS-CoV-2","AAACTACTGAGACGAC",7,188.65,6,-4.84,1.98,1.5,1.14,0.01,">1 nonsynonymous","V37D W106S L125T Q176L",4
"lib2","SARS-CoV-2","AAACTACTTCACGACA",3,44.77,6,-4.84,0.79,3,1.29,0.01,">1 nonsynonymous","L5V W106F L162R",3
"lib2","SARS-CoV-2","AAACTACTTGTACGAA",8,77.57,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A81P S113W T170Q V182I T201M",5
"lib2","SARS-CoV-2","AAACTACTTTGTCCGA",4,14.53,9.44,-1.39,0.19,1.68,1.07,0.03,"1 nonsynonymous","Y50N",1
"lib2","SARS-CoV-2","AAACTAGAACCATTAT",2,27.25,10.26,-0.58,0.08,2.79,1.05,0,">1 nonsynonymous","T3Y N64A G83T",3
"lib2","SARS-CoV-2","AAACTAGAAGTGATTT",5,68.51,9.12,-1.71,0.06,2.83,1.13,0,">1 nonsynonymous","F8W A33S S43T D90Y F156G",5
"lib2","SARS-CoV-2","AAACTAGACACATACG",1,12.07,9.04,-1.8,0.17,1.62,1.06,0.01,">1 nonsynonymous","Y50I L60N",2
"lib2","SARS-CoV-2","AAACTAGAGGGTTTCA",5,91.18,10.68,-0.15,0.07,2.92,1.04,0,">1 nonsynonymous","L122Y E135M",2
"lib2","SARS-CoV-2","AAACTAGCAACTCAAT",3,21.64,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","L5T F12A Y35V Y143S",4
"lib2","SARS-CoV-2","AAACTAGCAGGATCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F17* R25G S45T Y50* I104T R127H T201*",7
"lib2","SARS-CoV-2","AAACTAGCCACTGGCG",2,29.33,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C31F Y143S",2
"lib2","SARS-CoV-2","AAACTAGGAATAACGC",5,48.2,10.43,-0.4,0.06,2.92,1.05,0,">1 nonsynonymous","Q84T F185Y",2
"lib2","SARS-CoV-2","AAACTAGGACTACCTT",11,60.65,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F17R I80T S129G",3
"lib2","SARS-CoV-2","AAACTAGGATACAAAC",1,16.83,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","R27F Y35T N40F F99Q F134I F167Y",6
"lib2","SARS-CoV-2","AAACTAGGCAGTTGAA",1,6.79,6.43,-4.41,2,3,1.13,0.03,"1 nonsynonymous","V103Y",1
"lib2","SARS-CoV-2","AAACTAGGGTTGCTTT",3,33.31,10.82,-0.01,0.04,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTAGTATTCCAAA",9,58.03,6.13,-4.71,0.29,1.53,1.11,0,">1 nonsynonymous","D112M P133T S139F Q163Y T201D",5
"lib2","SARS-CoV-2","AAACTAGTTAACGAAG",1,9.07,10.8,-0.03,0.04,3,1,0,">1 nonsynonymous","A42E N120E",2
"lib2","SARS-CoV-2","AAACTATAATAACTTT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","A14S L38S P54L Y91*",4
"lib2","SARS-CoV-2","AAACTATAGTCAGCTT",2,8.03,6,-4.84,2,3,1.07,0.01,"1 nonsynonymous","Y93N",1
"lib2","SARS-CoV-2","AAACTATCCCGAATGT",4,67.78,7.22,-3.62,0.34,1.5,1.2,0.03,">1 nonsynonymous","A67S D137S",2
"lib2","SARS-CoV-2","AAACTATCCTCAGACA",4,3.4,NA,NA,NA,NA,NA,NA,"stop","C6I N13C N30V K56T P82L V103D D112*",7
"lib2","SARS-CoV-2","AAACTATCCTTTAAAT",2,12.75,7.91,-2.93,0.46,1.5,1.08,0.06,">1 nonsynonymous","F12P G116K K128P",3
"lib2","SARS-CoV-2","AAACTATCTTAATGGT",2,222.55,8.88,-1.96,0.05,2.3,1.08,0,">1 nonsynonymous","A14S F44D D59E P177A",4
"lib2","SARS-CoV-2","AAACTATGCTACAGGC",5,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C I88T I104N",3
"lib2","SARS-CoV-2","AAACTATGCTGGATAG",5,76.34,10.76,-0.07,0.05,2.93,1.09,0,"1 nonsynonymous","N110L",1
"lib2","SARS-CoV-2","AAACTATGTTTGTTCA",1,25.21,10.39,-0.45,0.08,2.88,1.1,0,">1 nonsynonymous","T55L K87N",2
"lib2","SARS-CoV-2","AAACTATTAACACAAT",1,28.25,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","T85Y C150S",2
"lib2","SARS-CoV-2","AAACTATTAACCCCAC",4,19.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V K56Q F167L",3
"lib2","SARS-CoV-2","AAACTATTCCATCATG",21,86.15,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","Q84H Y121F S147T C150R G166R",5
"lib2","SARS-CoV-2","AAACTATTCCTATTGA",5,66.98,9.86,-0.97,0.07,2.01,1.06,0,">1 nonsynonymous","F47N F62C",2
"lib2","SARS-CoV-2","AAACTATTGCCCATAG",7,22.01,10.91,0.08,0.08,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTATTGTCCATAT",4,18.26,6,-4.84,2,3,1.09,0,">1 nonsynonymous","P7E Y35S F167T",3
"lib2","SARS-CoV-2","AAACTATTTTATTTAA",6,134.33,10.72,-0.12,0.03,2.98,1.05,0,"1 nonsynonymous","L5C",1
"lib2","SARS-CoV-2","AAACTCAAATCACTAA",5,95.76,9.98,-0.85,0.06,2.8,1.05,0,">1 nonsynonymous","N64F T100H S164L",3
"lib2","SARS-CoV-2","AAACTCAAGAACAGTA",10,45.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L I104Y Y121D F160T T201A",5
"lib2","SARS-CoV-2","AAACTCAAGGAGCTTT",4,31.41,6.15,-4.69,1,1.5,1.22,0.03,">1 nonsynonymous","I80K F156S",2
"lib2","SARS-CoV-2","AAACTCAAGGGTAAAA",21,350.14,10.84,0.01,0.04,2.93,1.08,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","AAACTCAAGTGGAATA",2,20.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92C R136S",2
"lib2","SARS-CoV-2","AAACTCAATTATAACT",4,70.94,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","W23G A81V V173F",3
"lib2","SARS-CoV-2","AAACTCAATTCTCAGT",16,88.45,7.74,-3.09,0.26,1.5,1.11,0.02,">1 nonsynonymous","Y21F Y35T V115P V182T",4
"lib2","SARS-CoV-2","AAACTCACAAATTCCT",4,0.62,NA,NA,NA,NA,NA,NA,"stop","C31* Y50F G83Y Y119A P133R L188R",6
"lib2","SARS-CoV-2","AAACTCACAAGCTACA",14,108.35,9.76,-1.08,0.08,2.15,1.06,0,">1 nonsynonymous","F44C T100S",2
"lib2","SARS-CoV-2","AAACTCACAATATTAG",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10C D59P A105M",3
"lib2","SARS-CoV-2","AAACTCACAATTTTAA",1,84.6,10.84,0,0.05,2.95,1.07,0,"1 nonsynonymous","L188P",1
"lib2","SARS-CoV-2","AAACTCACGATACTAT",2,18.99,9.38,-1.46,0.36,1.82,1.09,0.08,">1 nonsynonymous","L57D N120W E135M S147M",4
"lib2","SARS-CoV-2","AAACTCACGCAACATG",8,177.74,10.77,-0.07,0.04,2.99,1.04,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","AAACTCACGTATTTCA",1,36.47,7.71,-3.13,0.24,1.5,1.09,0.02,">1 nonsynonymous","Y35L D98F W106I Y175N",4
"lib2","SARS-CoV-2","AAACTCACTAAAGAAG",4,82.39,9.56,-1.28,0.09,1.94,1.1,0,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","AAACTCACTCGTATGG",3,25.57,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V37L F62K S139M Q144S Q176A",5
"lib2","SARS-CoV-2","AAACTCACTTAGCTGT",4,36.46,10.56,-0.27,0.06,2.94,1.07,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","AAACTCACTTATTTGA",5,52.4,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A42T Y50D Y123D Y143V P169T",5
"lib2","SARS-CoV-2","AAACTCAGGATGTTTA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N G101Q V115F R179G",4
"lib2","SARS-CoV-2","AAACTCAGGCTTTGCG",11,181.5,11.2,0.37,0.04,2.9,1.11,0,">1 nonsynonymous","Q168H L188T",2
"lib2","SARS-CoV-2","AAACTCAGTCAGCCGT",1,58.78,10.6,-0.23,0.06,2.87,1.11,0,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","AAACTCATAAATTCGC",1,31.18,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","R127P V173N P177H G196W",4
"lib2","SARS-CoV-2","AAACTCATCTTTTCAG",1,23.86,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35V P54A C102R G117Q E141T F167A",6
"lib2","SARS-CoV-2","AAACTCATGCTTTAAA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","C6V V32* K56*",3
"lib2","SARS-CoV-2","AAACTCATTGATGTGA",3,32.47,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","I2K R127L P177V",3
"lib2","SARS-CoV-2","AAACTCATTTGTTGAA",1,2.09,NA,NA,NA,NA,NA,NA,"stop","G9* S43A Y50T N151S",4
"lib2","SARS-CoV-2","AAACTCCAACCGAACG",8,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99A Y178F",2
"lib2","SARS-CoV-2","AAACTCCAATCAAAAT",4,0.46,NA,NA,NA,NA,NA,NA,"stop","S36* K48Y P82N D90V A105Y G166L G174*",7
"lib2","SARS-CoV-2","AAACTCCAATGCCTAC",3,0.39,NA,NA,NA,NA,NA,NA,"stop","T15Y G116H P161*",3
"lib2","SARS-CoV-2","AAACTCCACACACATT",2,32.98,10.19,-0.65,0.05,2.94,1.01,0,">1 nonsynonymous","Y35I K132Y G146S G152S",4
"lib2","SARS-CoV-2","AAACTCCACCTGATGT",2,0.49,NA,NA,NA,NA,NA,NA,"stop","L5G S19E C61P I104F L122E K199*",6
"lib2","SARS-CoV-2","AAACTCCAGTTAATGA",10,71.25,10.59,-0.24,0.03,2.87,1.15,0,"1 nonsynonymous","T15N",1
"lib2","SARS-CoV-2","AAACTCCCAGGACTTG",4,88.15,10.65,-0.19,0.03,2.91,1.1,0,"1 nonsynonymous","F160G",1
"lib2","SARS-CoV-2","AAACTCCCCATTGCAT",9,61.04,8.71,-2.12,0.09,2.36,1.01,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","AAACTCCCGTTTTACG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","I28K F44* D97W",3
"lib2","SARS-CoV-2","AAACTCCGAATCTTAG",9,9.58,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","AAACTCCGACTAGAGT",6,27.41,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y39F Y66F P82F E141V",4
"lib2","SARS-CoV-2","AAACTCCGCGAGATTT",9,97.76,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","AAACTCCGGGTAGTGC",7,130.7,10.77,-0.07,0.03,2.94,1.07,0,"1 nonsynonymous","H189R",1
"lib2","SARS-CoV-2","AAACTCCTGTCCCATG",10,151.08,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D112W F167N",2
"lib2","SARS-CoV-2","AAACTCGAAGCAATTC",2,27.02,9.78,-1.06,0.12,2.02,1,0,">1 nonsynonymous","L38S S139G",2
"lib2","SARS-CoV-2","AAACTCGAGGCTACAA",5,0.66,NA,NA,NA,NA,NA,NA,"stop","S41G A89* Y175H L187Q",4
"lib2","SARS-CoV-2","AAACTCGCGGCACTGT",10,30.47,6,-4.84,1.79,1.5,1.22,0.02,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","AAACTCGGTAAATGTA",5,49.02,10.15,-0.68,0.09,2.51,1.01,0,">1 nonsynonymous","L5R I28V D59R K132L",4
"lib2","SARS-CoV-2","AAACTCTAAAAATTAA",11,9.01,NA,NA,NA,NA,NA,NA,"stop","V11L G51R I88A D98W N107* P149K Q176T",7
"lib2","SARS-CoV-2","AAACTCTAAAACAGCA",8,32.13,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A105G T140I F156V V173W R179V",5
"lib2","SARS-CoV-2","AAACTCTATACAGTGA",3,14.25,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S19R N64F L95Y N110L A190Y",5
"lib2","SARS-CoV-2","AAACTCTATCTACAAC",4,0.03,NA,NA,NA,NA,NA,NA,"stop","F8M A14V N40A C49S S164*",5
"lib2","SARS-CoV-2","AAACTCTCAGAGTTGG",4,42.09,6.4,-4.43,0.47,1.5,1.1,0.02,">1 nonsynonymous","G86N Y143L C150S F156Y V173F",5
"lib2","SARS-CoV-2","AAACTCTCGCTCATTC",1,16.71,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T46M L95S P197E",3
"lib2","SARS-CoV-2","AAACTCTCGTTGAAAT",12,58.02,8.91,-1.92,0.14,1.55,1.14,0.01,">1 nonsynonymous","F8G P133A N151S V173M",4
"lib2","SARS-CoV-2","AAACTCTGACTACTTT",7,11.75,8.7,-2.14,0.1,2.65,1.01,0,">1 nonsynonymous","C61P K87N G155Y T201V",4
"lib2","SARS-CoV-2","AAACTCTGCCGTACCA",2,11.92,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1C D97S K132N Y165R V173D T193Y V194G",7
"lib2","SARS-CoV-2","AAACTCTTACACCGAG",11,332.34,8.92,-1.91,0.06,2.21,1.08,0,">1 nonsynonymous","R16F Q176L K198D",3
"lib2","SARS-CoV-2","AAACTCTTAGATCCAT",1,11.39,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","G9L C49L I142F",3
"lib2","SARS-CoV-2","AAACTCTTCGCCCAAA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","C6D A14D G51S C61* I88Y T100E Y121T P161S",8
"lib2","SARS-CoV-2","AAACTCTTGCTAGGAT",4,34.39,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K48H T100Y A105M G116F Y123P P149K Y175T",7
"lib2","SARS-CoV-2","AAACTCTTTAATTACG",4,16.58,10.65,-0.19,0.04,3,1.01,0,">1 nonsynonymous","G9V P149L",2
"lib2","SARS-CoV-2","AAACTGAAAAGTGATG",8,9.49,NA,NA,NA,NA,NA,NA,"stop","A105* Y143*",2
"lib2","SARS-CoV-2","AAACTGAAAATTCATG",1,12.36,10.71,-0.13,0.06,2.89,1.14,0,"1 nonsynonymous","N151S",1
"lib2","SARS-CoV-2","AAACTGAAAGATAAGA",1,34.63,10.14,-0.7,0.05,2.75,1.03,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","AAACTGAACAACTTAA",18,173.31,8.32,-2.52,0.09,1.9,1.08,0,">1 nonsynonymous","S41R S45L Y143V S200A",4
"lib2","SARS-CoV-2","AAACTGAACGGTAGCA",23,251.99,9.25,-1.58,0.11,1.79,1.08,0.01,">1 nonsynonymous","S19G S45P",2
"lib2","SARS-CoV-2","AAACTGAACTTTTCCA",5,51.17,11.03,0.19,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTGAAGACTGAGC",2,49.82,10.39,-0.45,0.07,2.92,1.03,0,">1 nonsynonymous","G9Q W23F S41A",3
"lib2","SARS-CoV-2","AAACTGAAGCGGGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44L L60P T140A K199*",4
"lib2","SARS-CoV-2","AAACTGAAGGCCAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","N1A P7* I72R",3
"lib2","SARS-CoV-2","AAACTGAATGGATCCA",1,12.96,10.02,-0.82,0.07,2.86,1.04,0,">1 nonsynonymous","K48S Y91N",2
"lib2","SARS-CoV-2","AAACTGAATGTTTCAA",17,108.95,9.87,-0.97,0.07,2.32,1.09,0,">1 nonsynonymous","D34N S43D S53A S139L",4
"lib2","SARS-CoV-2","AAACTGACATAGTGTT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","N40T V65* L125G F134S",4
"lib2","SARS-CoV-2","AAACTGACCATACATA",8,122.14,10.24,-0.6,0.05,2.78,1.03,0,">1 nonsynonymous","A14T V32L K114R",3
"lib2","SARS-CoV-2","AAACTGACTATCAACA",1,14.37,10.27,-0.57,0.09,2.85,1.13,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","AAACTGACTTTATGCT",5,98.19,8.82,-2.02,0.07,2.87,1.14,0,">1 nonsynonymous","L5I D97H L125R",3
"lib2","SARS-CoV-2","AAACTGATAAAATCCA",2,5.92,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V20E L122Y S139M",3
"lib2","SARS-CoV-2","AAACTGATCGAATCAG",4,40.68,10.78,-0.06,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTGATTATACAGT",4,66.07,10.83,0,0.04,2.95,1.08,0,">1 nonsynonymous","V65I T201C",2
"lib2","SARS-CoV-2","AAACTGATTGAACACC",13,91.64,6.82,-4.01,0.45,1.5,1.24,0.03,">1 nonsynonymous","E10R S45N P82V",3
"lib2","SARS-CoV-2","AAACTGCACAACAGGA",3,52.75,8.32,-2.52,0.17,2.11,1.11,0.01,">1 nonsynonymous","A42P I88C F156N T201N",4
"lib2","SARS-CoV-2","AAACTGCATAATTAAC",17,103.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V20N D112S N157R",3
"lib2","SARS-CoV-2","AAACTGCATGCGAGGA",8,123.02,10.78,-0.06,0.05,2.9,1.08,0,"1 nonsynonymous","G152H",1
"lib2","SARS-CoV-2","AAACTGCCAATTTAAA",7,40.7,6,-4.84,1.7,1.5,1.17,0.02,">1 nonsynonymous","I2G G86C L122N",3
"lib2","SARS-CoV-2","AAACTGCGAGAGTAAA",3,61.12,7.23,-3.61,0.08,2.06,1.1,0,"1 nonsynonymous","C158M",1
"lib2","SARS-CoV-2","AAACTGCGATATGTCT",3,88.92,10.77,-0.07,0.04,3,1.02,0,">1 nonsynonymous","G174N H189N",2
"lib2","SARS-CoV-2","AAACTGCTTTGTATAG",6,23.89,7.57,-3.26,0.31,1.5,1.05,0.06,">1 nonsynonymous","C49Y K114M E141F",3
"lib2","SARS-CoV-2","AAACTGGACCTTTATG",3,90.02,10.34,-0.5,0.03,2.92,1.03,0,">1 nonsynonymous","K48R I138Y T148F",3
"lib2","SARS-CoV-2","AAACTGGAGAAACGAC",2,61.29,10.7,-0.13,0.04,2.88,1.09,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","AAACTGGATGCAGTAA",2,19.57,10.54,-0.3,0.07,2.97,1.03,0,">1 nonsynonymous","I2D L60H I142T",3
"lib2","SARS-CoV-2","AAACTGGATTCAAAAA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","N4C S43* F134R",3
"lib2","SARS-CoV-2","AAACTGGCTACCAGAG",3,1.99,NA,NA,NA,NA,NA,NA,"stop","C102* N120L S139V T170I",4
"lib2","SARS-CoV-2","AAACTGGCTGCTACTT",3,57.47,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S19E A105M P191R",3
"lib2","SARS-CoV-2","AAACTGGGAATGAATT",10,2.68,NA,NA,NA,NA,NA,NA,"stop","S43L T55A C61Y K128*",4
"lib2","SARS-CoV-2","AAACTGGGGCTACTCA",3,32.96,6.31,-4.53,0.3,2.15,1.14,0,">1 nonsynonymous","F17T T55F Y178L",3
"lib2","SARS-CoV-2","AAACTGGGTAGAAAAG",2,13.34,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N120F L131R T170F",3
"lib2","SARS-CoV-2","AAACTGGTATAAAAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","N92* V103H D112L",3
"lib2","SARS-CoV-2","AAACTGGTGACCAAAT",10,62.37,9.58,-1.26,0.12,1.81,1.1,0.01,">1 nonsynonymous","D34V E135S",2
"lib2","SARS-CoV-2","AAACTGGTGCAGGTAA",12,214.89,9.86,-0.97,0.08,2.34,1.08,0,">1 nonsynonymous","P133Q G152S",2
"lib2","SARS-CoV-2","AAACTGTAAAAAAATA",8,64.89,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K87E D112F K128S G174P E186D",5
"lib2","SARS-CoV-2","AAACTGTAAAGACAGG",1,3.72,NA,NA,NA,NA,NA,NA,"stop","R25* D90L V103E L162I",4
"lib2","SARS-CoV-2","AAACTGTCAAATAGCA",4,50.48,7.32,-3.52,0.13,1.6,1.11,0,">1 nonsynonymous","R127G P133R",2
"lib2","SARS-CoV-2","AAACTGTCTTAACTGT",6,169.51,10.81,-0.02,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTGTGAGTACGCT",6,1.25,NA,NA,NA,NA,NA,NA,"stop","L60* T85S K128I",3
"lib2","SARS-CoV-2","AAACTGTGTGAGACTT",4,182.24,10.53,-0.31,0.05,2.89,1.08,0,">1 nonsynonymous","V32S T46S K56T",3
"lib2","SARS-CoV-2","AAACTGTGTTAGATCC",5,30.7,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V11G Y50R Q84H L125Y C150I P161C",6
"lib2","SARS-CoV-2","AAACTGTTAAGTATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","Y93* S139G A145G",3
"lib2","SARS-CoV-2","AAACTGTTATACAAAA",7,116.97,8.95,-1.88,0.06,2.95,1.07,0,">1 nonsynonymous","Y143F G166L",2
"lib2","SARS-CoV-2","AAACTGTTGTGATATT",6,31.1,6,-4.84,1.71,1.5,1.17,0.02,">1 nonsynonymous","A89M V103N S164D",3
"lib2","SARS-CoV-2","AAACTTAAAAACCACA",3,14.26,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y39M V180G",2
"lib2","SARS-CoV-2","AAACTTAAAAATACGT",3,110.98,10.21,-0.63,0.04,2.83,1.06,0,">1 nonsynonymous","S41I D98C",2
"lib2","SARS-CoV-2","AAACTTAAAAGCTACC",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76K K87M C102F N120A Q163W Y175S",6
"lib2","SARS-CoV-2","AAACTTAAAAGTTAAT",11,88.8,8.42,-2.42,0.12,1.85,1.11,0.01,">1 nonsynonymous","C6V F44H N118Q",3
"lib2","SARS-CoV-2","AAACTTAACAGACCAG",1,12.38,10.72,-0.12,0.05,2.94,1.07,0,"1 nonsynonymous","S53C",1
"lib2","SARS-CoV-2","AAACTTAATACGATTC",6,84.7,10.49,-0.34,0.05,2.8,1.06,0,">1 nonsynonymous","Y123K Y178S",2
"lib2","SARS-CoV-2","AAACTTAATCCGAGAA",7,52.7,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10R Q79K D90Y D97M G116L",5
"lib2","SARS-CoV-2","AAACTTAATTTCCCGC",9,77.63,10.18,-0.65,0.03,2.83,1.05,0,"1 nonsynonymous","T15C",1
"lib2","SARS-CoV-2","AAACTTACAGAAATCT",2,11.87,10.54,-0.3,0.08,3,1,0,">1 nonsynonymous","S41L P149H",2
"lib2","SARS-CoV-2","AAACTTACGACGACAT",4,27.67,7.81,-3.03,0.33,1.5,1.04,0.04,">1 nonsynonymous","V11Y N40D I88T",3
"lib2","SARS-CoV-2","AAACTTACGCATTAAT",2,21.29,9.06,-1.78,0.09,2.57,1.06,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","AAACTTACGTATCGGC",4,17.58,6.35,-4.49,0.97,1.5,1.23,0.04,">1 nonsynonymous","S41W L57W G146F C158P S184R K198T",6
"lib2","SARS-CoV-2","AAACTTACTACTATTA",4,25.75,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","D68R S129R",2
"lib2","SARS-CoV-2","AAACTTACTTAGTTTA",1,98.65,10.78,-0.05,0.03,2.89,1.11,0,">1 nonsynonymous","A42Q D98S",2
"lib2","SARS-CoV-2","AAACTTAGAGAATAAG",5,28.59,8.43,-2.41,0.09,2.82,1.08,0,">1 nonsynonymous","S129G N157R",2
"lib2","SARS-CoV-2","AAACTTAGGCCCACTC",23,138.34,6.81,-4.02,0.34,1.5,1.17,0.02,">1 nonsynonymous","F8Q F62Y I104M E135W",4
"lib2","SARS-CoV-2","AAACTTAGGGACACAG",7,109.73,9.82,-1.01,0.06,2.14,1.03,0,">1 nonsynonymous","V52D P149L",2
"lib2","SARS-CoV-2","AAACTTATAAACAATG",5,8.92,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I28D C31Y L60R P197L",4
"lib2","SARS-CoV-2","AAACTTATACTTACAG",1,21.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7L S36I L60R F167P G172I F185A",6
"lib2","SARS-CoV-2","AAACTTATAGACTAAA",4,49.65,10.92,0.08,0.07,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAACTTATGCGATAAA",1,6.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V F99Q",2
"lib2","SARS-CoV-2","AAACTTATTTGAGGGG",4,13.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44L C61L F99Q T148K",4
"lib2","SARS-CoV-2","AAACTTCACGACTGGC",3,28.34,10.67,-0.17,0.03,2.96,1.03,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AAACTTCACTAAGATA",7,2.23,NA,NA,NA,NA,NA,NA,"stop","I2* C49D N109C Y119L",4
"lib2","SARS-CoV-2","AAACTTCACTACCAAG",1,17.99,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","K26M D34C I104E T170S",4
"lib2","SARS-CoV-2","AAACTTCAGAACAGAT",12,62.79,6,-4.84,2,3,1.23,0,">1 nonsynonymous","K56A W106T C158P S184H",4
"lib2","SARS-CoV-2","AAACTTCAGACCAATC",1,9.35,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y35A G83F G146L T170N",4
"lib2","SARS-CoV-2","AAACTTCTACTGCTAT",5,22.67,6,-4.84,2,3,1.27,0.03,">1 nonsynonymous","S69P S147W",2
"lib2","SARS-CoV-2","AAACTTCTCGCAGGCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N V181S",2
"lib2","SARS-CoV-2","AAACTTCTGAGCCACA",17,0.85,NA,NA,NA,NA,NA,NA,"stop","A18R G86* K114S L122V",4
"lib2","SARS-CoV-2","AAACTTCTGTTTATAG",5,14.11,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S19M N40A T46K P54H D90Y D112A S139R S147D V182H",9
"lib2","SARS-CoV-2","AAACTTGAATGAACCC",2,43.95,10.88,0.05,0.05,3,1.03,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","AAACTTGCTAAAAGCA",9,168.06,9.72,-1.12,0.04,2.02,1.08,0,">1 nonsynonymous","D98N E135R S184L",3
"lib2","SARS-CoV-2","AAACTTGGGCAGCTGC",7,110.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C31F P54A A105V F160S P169E",5
"lib2","SARS-CoV-2","AAACTTGTACAATGCA",10,5.97,NA,NA,NA,NA,NA,NA,"stop","C6V I28S A145V P177*",4
"lib2","SARS-CoV-2","AAACTTGTCACCTAGC",2,13.8,6.05,-4.79,1.39,3,1.36,0.04,">1 nonsynonymous","G9K T85L D112V N118V F185S",5
"lib2","SARS-CoV-2","AAACTTGTGATCGACG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","P82L N92I E135* G155L",4
"lib2","SARS-CoV-2","AAACTTGTTAAGATCC",5,48.19,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","R16L C61R D68S G117A",4
"lib2","SARS-CoV-2","AAACTTGTTAATAAAT",9,56.64,10.84,0,0.06,2.92,1.12,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","AAACTTGTTAGCAGAT",6,19.93,6.21,-4.62,0.64,1.5,1.05,0.03,">1 nonsynonymous","C49R I104F N130P S139V",4
"lib2","SARS-CoV-2","AAACTTTAAAGTAATA",4,26.09,6.01,-4.83,1,1.5,1.1,0.02,">1 nonsynonymous","R27Q F99L N107Y",3
"lib2","SARS-CoV-2","AAACTTTACGATAGAT",7,101.72,9.82,-1.01,0.02,2.95,1.07,0,"1 nonsynonymous","T170G",1
"lib2","SARS-CoV-2","AAACTTTAGAACCAAA",2,21.03,6.02,-4.81,1.95,1.5,1.27,0.06,">1 nonsynonymous","Q84N C150G C158Y H189V",4
"lib2","SARS-CoV-2","AAACTTTATACCGTAA",1,6.77,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","G101Y V180L",2
"lib2","SARS-CoV-2","AAACTTTATATCAACG",4,124.27,9.7,-1.13,0.1,2.12,1.09,0,">1 nonsynonymous","S69A G155W",2
"lib2","SARS-CoV-2","AAACTTTCACGATTTC",2,0.4,NA,NA,NA,NA,NA,NA,"stop","W23* A81H",2
"lib2","SARS-CoV-2","AAACTTTCCAAGGTAA",1,3.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","AAACTTTGAACAAATT",7,36.24,7.39,-3.45,0.35,1.5,1.17,0.03,">1 nonsynonymous","F134S V180A",2
"lib2","SARS-CoV-2","AAACTTTGAACAACAT",6,28.71,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","W23D F99K",2
"lib2","SARS-CoV-2","AAACTTTGATATGTTA",5,53.7,6.81,-4.02,0.34,1.5,1.21,0.02,">1 nonsynonymous","N92S S147P G155C S184Y",4
"lib2","SARS-CoV-2","AAACTTTGGAACAAAG",6,96.19,10.32,-0.52,0.07,2.9,1.08,0,">1 nonsynonymous","N4L S36R",2
"lib2","SARS-CoV-2","AAACTTTGGAGCAGAT",4,7.74,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V103L P133M",2
"lib2","SARS-CoV-2","AAACTTTGTATTACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35L I88* P96* Y121* F134H G152*",6
"lib2","SARS-CoV-2","AAACTTTGTTATCAGT",6,148.7,10.54,-0.3,0.05,2.89,1.1,0,">1 nonsynonymous","C61L Q144S",2
"lib2","SARS-CoV-2","AAACTTTTATTCGTCT",6,64.11,6.06,-4.78,1.06,1.5,1.25,0.03,">1 nonsynonymous","L5T C49K P54R N120I T148R P197S S200L",7
"lib2","SARS-CoV-2","AAACTTTTTACGGACG",5,57.57,8.74,-2.09,0.12,2.29,1.04,0.01,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","AAACTTTTTTAGACGA",9,65.57,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10F T63F C150Y",3
"lib2","SARS-CoV-2","AAACTTTTTTCCTATT",2,33.8,9.02,-1.82,0.1,2.23,1.1,0,">1 nonsynonymous","D59E S69T Y121T K198I",4
"lib2","SARS-CoV-2","AAAGAAAAAAATCAAT",4,11.38,6.17,-4.66,1.13,1.5,1.21,0.05,">1 nonsynonymous","P7Q S41L K87E Y93A",4
"lib2","SARS-CoV-2","AAAGAAAAACAAACAT",4,112.61,10.61,-0.23,0.04,2.96,1.02,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","AAAGAAAAACCTATAA",2,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P T15D L60D T85I D98A",5
"lib2","SARS-CoV-2","AAAGAAAAAGGTGATT",4,121.55,10.58,-0.26,0.05,2.89,1.06,0,"1 nonsynonymous","E186A",1
"lib2","SARS-CoV-2","AAAGAAAAATCTTGCC",2,45.38,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","T55V G86I W106Q",3
"lib2","SARS-CoV-2","AAAGAAAACACCAAAT",10,2.43,NA,NA,NA,NA,NA,NA,"stop","C61* G116R N157Y S200Y",4
"lib2","SARS-CoV-2","AAAGAAAACCAGGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I P82A R124H E186K",4
"lib2","SARS-CoV-2","AAAGAAAACCGAAATA",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70R N107F K128S I138R G155E",5
"lib2","SARS-CoV-2","AAAGAAAACGAATAAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","A14R G146*",2
"lib2","SARS-CoV-2","AAAGAAAACGAGGTAA",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C P82T K87A F126I K199D",5
"lib2","SARS-CoV-2","AAAGAAAACTACTATA",4,73.74,10.77,-0.07,0.09,2.96,1,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","AAAGAAAACTAGTGAA",8,85.29,8.62,-2.22,0.14,1.87,1.13,0.01,">1 nonsynonymous","N4L S69T N118C",3
"lib2","SARS-CoV-2","AAAGAAAAGAAAACGG",9,209.18,8.87,-1.96,0.06,2.93,1.09,0,"1 nonsynonymous","T170V",1
"lib2","SARS-CoV-2","AAAGAAAATAAAACAA",12,0.21,NA,NA,NA,NA,NA,NA,"stop","P82W A89G R136* K199G",4
"lib2","SARS-CoV-2","AAAGAAAATAAATACT",7,32.41,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F8H F47C D68K",3
"lib2","SARS-CoV-2","AAAGAAAATCGATTTG",2,8.97,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","C102K W106R K128M",3
"lib2","SARS-CoV-2","AAAGAAACACACAAAC",8,0.76,NA,NA,NA,NA,NA,NA,"stop","F12H W106*",2
"lib2","SARS-CoV-2","AAAGAAACACCACGGA",4,56.76,10.85,0.01,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAAACATATACTA",4,45.06,6,-4.84,1.42,3,1.13,0,">1 nonsynonymous","R136G Q144L T148L L188Y",4
"lib2","SARS-CoV-2","AAAGAAACCCTTATGC",1,5.77,9.97,-0.86,0.09,3,1.05,0,"1 nonsynonymous","S164I",1
"lib2","SARS-CoV-2","AAAGAAACGTAAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F V37Q F99L S139V G166Y",5
"lib2","SARS-CoV-2","AAAGAAACTACCGGCA",2,31.02,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","L5R V32E D90Y A105V L162M T170C",6
"lib2","SARS-CoV-2","AAAGAAACTCATGGAA",6,76.69,10.47,-0.37,0.05,2.95,1.06,0,">1 nonsynonymous","E10S G51R C61N",3
"lib2","SARS-CoV-2","AAAGAAACTGACGATA",12,50.3,6.03,-4.81,1.39,1.5,1.22,0.04,">1 nonsynonymous","L5N E10R Q84W G101C N110I Y123L P169F",7
"lib2","SARS-CoV-2","AAAGAAACTTTACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N64* K114I",2
"lib2","SARS-CoV-2","AAAGAAAGAACTGGGA",2,1.23,NA,NA,NA,NA,NA,NA,"stop","V20K S69* A81C E141V",4
"lib2","SARS-CoV-2","AAAGAAAGAATGATGT",5,0.64,NA,NA,NA,NA,NA,NA,"stop","K56R Y66S T201*",3
"lib2","SARS-CoV-2","AAAGAAAGACAGTGCG",7,8.92,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","D34L A89G F99T",3
"lib2","SARS-CoV-2","AAAGAAAGACTATACC",2,23.41,7.39,-3.44,0.38,1.5,1,0.07,">1 nonsynonymous","A67S L95R",2
"lib2","SARS-CoV-2","AAAGAAAGCCCGGTCA",7,118.71,10.84,0,0.07,2.81,1.17,0,"1 nonsynonymous","S43H",1
"lib2","SARS-CoV-2","AAAGAAAGTAAACAAT",10,109.98,9.99,-0.84,0.05,2.83,1.03,0,">1 nonsynonymous","C6S G152S",2
"lib2","SARS-CoV-2","AAAGAAAGTAAGAAAC",3,17.88,10.6,-0.24,0.08,2.67,1.32,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","AAAGAAAGTGATGAAA",7,33.1,9.64,-1.19,0.11,1.9,1.1,0,">1 nonsynonymous","T3H A81Y",2
"lib2","SARS-CoV-2","AAAGAAAGTGGATACT",4,41.22,10.22,-0.62,0.04,2.8,1.08,0,"1 nonsynonymous","E10F",1
"lib2","SARS-CoV-2","AAAGAAATAAATTAAA",1,16.39,9.74,-1.09,0.17,1.9,1.03,0.02,">1 nonsynonymous","Y50F L60S D98V S129Q S200D",5
"lib2","SARS-CoV-2","AAAGAAATAACATAGT",1,60.05,8.36,-2.47,0.1,2.26,1.05,0,">1 nonsynonymous","N120I E154V Y165H",3
"lib2","SARS-CoV-2","AAAGAAATAACGTTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81C V103R Q176G",3
"lib2","SARS-CoV-2","AAAGAAATACGACTTT",11,59.62,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14W R27L Y66A N92F",4
"lib2","SARS-CoV-2","AAAGAAATCAATAATA",5,36.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50A N107S Q163K",3
"lib2","SARS-CoV-2","AAAGAAATCCAAAATG",1,23.22,10.44,-0.4,0.08,2.94,1.07,0,"1 nonsynonymous","D98F",1
"lib2","SARS-CoV-2","AAAGAAATCCTAATGA",2,21.97,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y93C N107W K128M T201L",4
"lib2","SARS-CoV-2","AAAGAAATGCTGTATA",2,15.2,6,-4.84,2,1.5,1.15,0.07,"1 nonsynonymous","G101M",1
"lib2","SARS-CoV-2","AAAGAAATGGACGTGG",3,53.24,10.73,-0.1,0.04,2.96,1.02,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","AAAGAAATGGACTGAC",2,48.27,10.78,-0.06,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAAATTCCTAAAA",3,50.31,8.98,-1.86,0.06,2.98,1.05,0,"1 nonsynonymous","N157H",1
"lib2","SARS-CoV-2","AAAGAACAAGCATTAC",5,20.58,10.29,-0.55,0.06,3,1,0,">1 nonsynonymous","N58M A105S K114L",3
"lib2","SARS-CoV-2","AAAGAACAAGGTCTCC",19,112.11,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y50H G74R Y175I",3
"lib2","SARS-CoV-2","AAAGAACAGAACGATA",2,13.66,6,-4.84,1.87,1.5,1.11,0.02,">1 nonsynonymous","R25P Y50A",2
"lib2","SARS-CoV-2","AAAGAACAGGACAGGT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","F44P P96* W106K G166N",4
"lib2","SARS-CoV-2","AAAGAACAGGTCCCCA",3,85.64,9.35,-1.48,0.14,1.51,1.06,0.01,"1 nonsynonymous","L183Y",1
"lib2","SARS-CoV-2","AAAGAACATAACTGTG",6,69.05,8.69,-2.14,0.15,1.56,1.12,0.01,">1 nonsynonymous","G9M S19R F62L",3
"lib2","SARS-CoV-2","AAAGAACATTGGGTCG",9,69.4,10.84,0.01,0.06,2.89,1.12,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","AAAGAACCAGATGAAA",9,8.14,NA,NA,NA,NA,NA,NA,"stop","E10F P96G G166*",3
"lib2","SARS-CoV-2","AAAGAACCCTTGTCGG",8,49.62,10.33,-0.51,0.07,2.86,1.12,0,">1 nonsynonymous","G9T Y39R K48L",3
"lib2","SARS-CoV-2","AAAGAACGAGCCAGAA",3,19.17,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14R D59P K87L L95T T201G",5
"lib2","SARS-CoV-2","AAAGAACGAGCTCGCA",5,116.8,9.85,-0.99,0.07,2.41,1,0,">1 nonsynonymous","S41P C61Y G83M D90K I138T",5
"lib2","SARS-CoV-2","AAAGAACGCAGAGGGA",2,55.85,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R25I N58Q K132A S147P F167V",5
"lib2","SARS-CoV-2","AAAGAACGCAGCCGAA",4,11.64,6.77,-4.06,0.55,1.5,1.24,0.05,">1 nonsynonymous","C49E S200W",2
"lib2","SARS-CoV-2","AAAGAACGCAGTGCAT",9,53.91,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V37E Q79V Y123T N157F",4
"lib2","SARS-CoV-2","AAAGAACGCAGTTCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7E F12L Y35G V71W G83L E135T Y165W Q176*",8
"lib2","SARS-CoV-2","AAAGAACGCTAGATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E V20W Y39V V71E N107R N151P G166N",7
"lib2","SARS-CoV-2","AAAGAACGGCCTGAGA",2,24.19,10.33,-0.5,0.05,3,1.01,0,">1 nonsynonymous","L5Y G155S H189Y",3
"lib2","SARS-CoV-2","AAAGAACGTACAGTGA",14,73.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23N S41T K48T V103K N120G I138R Y143L",7
"lib2","SARS-CoV-2","AAAGAACTCAATCGCC",7,0.42,NA,NA,NA,NA,NA,NA,"stop","Y35K K56R V77R V103P K114Q G172*",6
"lib2","SARS-CoV-2","AAAGAACTGTTAGATT",4,28.83,6.7,-4.14,0.52,1.5,1.12,0.03,">1 nonsynonymous","P96D L131M E154Y",3
"lib2","SARS-CoV-2","AAAGAACTTAAAACGG",1,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10Y",1
"lib2","SARS-CoV-2","AAAGAACTTAACCTAT",4,58.88,10.26,-0.57,0.05,2.87,1.06,0,"1 nonsynonymous","S45F",1
"lib2","SARS-CoV-2","AAAGAACTTCTTATTA",2,2.61,NA,NA,NA,NA,NA,NA,"stop","S41Y G51Y K87*",3
"lib2","SARS-CoV-2","AAAGAACTTTATATAC",1,19.04,9.99,-0.85,0.16,2.33,1.02,0.01,">1 nonsynonymous","N64L N107S N151L",3
"lib2","SARS-CoV-2","AAAGAAGAAAGAGGAT",11,107.13,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19L R127S",2
"lib2","SARS-CoV-2","AAAGAAGAAAGCACAA",3,45.73,10.89,0.06,0.09,2.81,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAAGAAGTACAAC",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V K87E N120T Y159H",4
"lib2","SARS-CoV-2","AAAGAAGAATAAACAT",14,83.35,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N30E C49R I88Y D98T G174T",5
"lib2","SARS-CoV-2","AAAGAAGAATGTCAGT",6,83.75,6,-4.84,1.17,1.5,1.18,0.01,">1 nonsynonymous","S113V S139V L162M",3
"lib2","SARS-CoV-2","AAAGAAGAATGTCTGT",1,6.74,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N4I A22R D68V D90R G146T",5
"lib2","SARS-CoV-2","AAAGAAGACATATACA",5,62.89,7.93,-2.91,0.22,1.53,1.11,0.02,">1 nonsynonymous","V37S R179V",2
"lib2","SARS-CoV-2","AAAGAAGACGTGAACC",4,55.97,9.56,-1.27,0.09,2.26,1.04,0,">1 nonsynonymous","G9R Y91Q",2
"lib2","SARS-CoV-2","AAAGAAGACTGAAGTA",6,50.67,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44M P54R N64Q R73L F185H",5
"lib2","SARS-CoV-2","AAAGAAGAGTAGAATT",18,102.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23N Y35R E76K N120I",4
"lib2","SARS-CoV-2","AAAGAAGAGTATATAC",12,3.22,NA,NA,NA,NA,NA,NA,"stop","A14Y D112* C158M G172V",4
"lib2","SARS-CoV-2","AAAGAAGATACGCTAA",5,10.6,7.7,-3.13,0.23,2.24,1.02,0.02,">1 nonsynonymous","R73C T100S Y121H N151H",4
"lib2","SARS-CoV-2","AAAGAAGATGGAGCCA",13,166.85,6,-4.84,1.35,1.5,1.16,0.01,">1 nonsynonymous","C49R T85D N107C K114A",4
"lib2","SARS-CoV-2","AAAGAAGATGTCATAC",4,20.31,9.7,-1.13,0.13,1.87,1.06,0.01,">1 nonsynonymous","L38S P149I",2
"lib2","SARS-CoV-2","AAAGAAGCAAACTAAG",8,0.64,NA,NA,NA,NA,NA,NA,"stop","P7L K56I W106* P149T",4
"lib2","SARS-CoV-2","AAAGAAGCAAATTATC",6,58.16,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28E G51F",2
"lib2","SARS-CoV-2","AAAGAAGCAATACAGT",2,50.11,9.68,-1.16,0.08,2.77,1.06,0,">1 nonsynonymous","C6Y S43N P54T",3
"lib2","SARS-CoV-2","AAAGAAGCAGACAGAG",2,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I K94E",2
"lib2","SARS-CoV-2","AAAGAAGCCCTAAGAC",4,0.62,NA,NA,NA,NA,NA,NA,"stop","D98Q I142*",2
"lib2","SARS-CoV-2","AAAGAAGCCGTTTACG",5,35.17,6,-4.84,1.76,1.5,1.08,0.01,">1 nonsynonymous","T15K S36P A89E W106Y T201I",5
"lib2","SARS-CoV-2","AAAGAAGGAGTCCTAG",3,65.29,10.05,-0.79,0.06,2.61,1.04,0,">1 nonsynonymous","L60R E135C",2
"lib2","SARS-CoV-2","AAAGAAGGCCGTCAAA",13,7.4,NA,NA,NA,NA,NA,NA,"stop","E10L A14* Y35G L60F G174V",5
"lib2","SARS-CoV-2","AAAGAAGGGCATACTT",4,1.05,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","AAAGAAGGTATTGTAA",8,71.15,6,-4.84,1.98,1.5,1.17,0.01,">1 nonsynonymous","R16N P82F Y93S F160R",4
"lib2","SARS-CoV-2","AAAGAAGTACAACTTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P F70Y D90P T148S",4
"lib2","SARS-CoV-2","AAAGAAGTACTTTGTA",5,93.75,8.12,-2.72,0.12,2.37,1.12,0.01,">1 nonsynonymous","Y35V N107D Y119H",3
"lib2","SARS-CoV-2","AAAGAAGTAGTAGCGG",2,50.91,6.21,-4.63,0.83,1.5,1.21,0.02,">1 nonsynonymous","K56S I88S T148I T201Q",4
"lib2","SARS-CoV-2","AAAGAAGTATAGAAGG",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V52I N58* G86Y N107V",4
"lib2","SARS-CoV-2","AAAGAAGTGTACGATA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","V52Y Q84* N110M P133A",4
"lib2","SARS-CoV-2","AAAGAAGTGTACGTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T D98E C102Y Y121V",4
"lib2","SARS-CoV-2","AAAGAAGTTAATATTC",5,7.82,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D97R I104L N109D G152C C158N Q168R",6
"lib2","SARS-CoV-2","AAAGAAGTTATAAAGT",6,18.11,6,-4.84,2,3,1.25,0,">1 nonsynonymous","A89I V182F",2
"lib2","SARS-CoV-2","AAAGAAGTTCTTCGTG",4,26.47,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","V20A D97P W106T Y165L",4
"lib2","SARS-CoV-2","AAAGAAGTTTATCACA",4,32.69,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I88P Q144E",2
"lib2","SARS-CoV-2","AAAGAAGTTTGGACAA",1,9.43,8.46,-2.38,0.25,1.5,1.13,0.02,">1 nonsynonymous","G9R D59G A81T S139N",4
"lib2","SARS-CoV-2","AAAGAATAAACATATG",1,20.97,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","K26R S69E N120I R127F",4
"lib2","SARS-CoV-2","AAAGAATAACAACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7R A14F N92L G166*",4
"lib2","SARS-CoV-2","AAAGAATAATAAGAAG",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G101D",2
"lib2","SARS-CoV-2","AAAGAATAATATCAGA",12,142.97,10.36,-0.48,0.04,2.89,1.12,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","AAAGAATAATTCATCG",6,14.84,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T15S Y21L V103A D137S T148L",5
"lib2","SARS-CoV-2","AAAGAATACACGAAAA",2,23.77,7.87,-2.97,0.28,1.5,1.06,0.02,">1 nonsynonymous","I104L S139L Y178S",3
"lib2","SARS-CoV-2","AAAGAATACGTCAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","D68M I104G Y121* S129R",4
"lib2","SARS-CoV-2","AAAGAATAGCAAACCC",4,30.24,10.55,-0.29,0.08,2.92,1.01,0,">1 nonsynonymous","N4P K48S E141N",3
"lib2","SARS-CoV-2","AAAGAATATAAGAGAA",5,30.21,9.6,-1.24,0.15,2,1.12,0.01,">1 nonsynonymous","F12T N64V T201P",3
"lib2","SARS-CoV-2","AAAGAATATAAGTTCG",4,1.57,NA,NA,NA,NA,NA,NA,"stop","S45Y V52H Y121*",3
"lib2","SARS-CoV-2","AAAGAATATATATGCA",2,26.52,9.53,-1.3,0.13,2.04,1.02,0.01,">1 nonsynonymous","L57T D90W H189Q",3
"lib2","SARS-CoV-2","AAAGAATATCAAACAA",3,64.02,8.92,-1.91,0.17,1.98,1.13,0.01,">1 nonsynonymous","S19K Y119R",2
"lib2","SARS-CoV-2","AAAGAATCAAAAACAG",4,79.91,10.78,-0.05,0.04,2.83,1.09,0,"1 nonsynonymous","R16T",1
"lib2","SARS-CoV-2","AAAGAATCACCTTTGA",9,2.95,NA,NA,NA,NA,NA,NA,"stop","R27G A33* T100V V103G S139N",5
"lib2","SARS-CoV-2","AAAGAATCCGCTTCGC",3,29.6,9,-1.84,0.2,1.65,1.12,0.03,">1 nonsynonymous","N40S Y50V",2
"lib2","SARS-CoV-2","AAAGAATCTAGGAGAA",2,15.57,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41M C61I G86R D98N S139D",5
"lib2","SARS-CoV-2","AAAGAATGAAAGAGGA",9,98.85,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F12C G86S K94T S184F",4
"lib2","SARS-CoV-2","AAAGAATGAACCGAGC",16,1.57,NA,NA,NA,NA,NA,NA,"stop","C6W C49S N64*",3
"lib2","SARS-CoV-2","AAAGAATGAATAAATT",5,50.13,10.78,-0.06,0.07,2.96,1.06,0,"1 nonsynonymous","S184V",1
"lib2","SARS-CoV-2","AAAGAATGACACACGG",2,37.21,10.66,-0.18,0.07,2.85,1.07,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","AAAGAATGAGAATAAA",12,169.26,9.96,-0.88,0.05,2.7,1.06,0,">1 nonsynonymous","A81E N151P",2
"lib2","SARS-CoV-2","AAAGAATGATAAACCG",1,16.83,6.47,-4.37,0.45,1.5,1.18,0.02,">1 nonsynonymous","D59C D68V A105Q F134R",4
"lib2","SARS-CoV-2","AAAGAATGGTTTTAAA",15,62.7,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y93G T140S",2
"lib2","SARS-CoV-2","AAAGAATTAGCGCATC",5,33.48,8.25,-2.58,0.11,1.5,1.09,0.01,">1 nonsynonymous","Y39N Y91R N130W",3
"lib2","SARS-CoV-2","AAAGAATTCAGCGTAA",7,83.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","E10S Y50D A105M I142Q Q176L",5
"lib2","SARS-CoV-2","AAAGAATTCATAACGT",2,12.65,6,-4.84,2,3,1.39,0.01,">1 nonsynonymous","I88E L95Y C102P T201R",4
"lib2","SARS-CoV-2","AAAGAATTCCCTTAAA",12,302.4,10.47,-0.36,0.03,2.93,1.03,0,"1 nonsynonymous","F17Y",1
"lib2","SARS-CoV-2","AAAGAATTGCCAAGTC",5,24.98,7.99,-2.85,0.13,1.51,1.1,0,">1 nonsynonymous","R27A Y35S N157T",3
"lib2","SARS-CoV-2","AAAGAATTTCCAAAAG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V A42T K48S R136V G155A Q163L",6
"lib2","SARS-CoV-2","AAAGACAAAAAAAGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A18M I72F K94* T100I",4
"lib2","SARS-CoV-2","AAAGACAAAAGTTAAC",2,23.87,10.85,0.02,0.06,2.89,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGACAAATATCTAG",1,3.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAGACAATAACAGAC",2,21.02,6,-4.84,1.43,2.21,1.13,0.01,">1 nonsynonymous","A18H N107C E154M V180Y",4
"lib2","SARS-CoV-2","AAAGACAATAACAGAG",12,13.02,6.54,-4.29,0.42,2.61,1.19,0.06,">1 nonsynonymous","G9V T15F C49L D90G P149T T170W",6
"lib2","SARS-CoV-2","AAAGACAATTGCTTAA",4,16.69,6.73,-4.11,0.59,1.5,1.19,0.03,">1 nonsynonymous","S29G V37W N109E R127A",4
"lib2","SARS-CoV-2","AAAGACACAACACTGA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","A33K D90* K198R",3
"lib2","SARS-CoV-2","AAAGACACCAACAGAA",5,29.87,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","V71G S113L Y159P",3
"lib2","SARS-CoV-2","AAAGACACGGGCAAAC",2,20.6,10.66,-0.17,0.07,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGACAGATAAATGA",7,105.9,10.22,-0.61,0.05,2.86,1.03,0,">1 nonsynonymous","G51T S200Y",2
"lib2","SARS-CoV-2","AAAGACAGCAAGCACA",2,27.21,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","I28M F70G F156T Y165R",4
"lib2","SARS-CoV-2","AAAGACATAATCCGCC",2,17.78,6,-4.84,1.47,3,1.1,0,">1 nonsynonymous","D90L Y123D G174V",3
"lib2","SARS-CoV-2","AAAGACATACCATGGT",1,14.85,9.79,-1.05,0.19,1.61,1,0.01,">1 nonsynonymous","T3N G9Y N58F T63F K128R E154S",6
"lib2","SARS-CoV-2","AAAGACATAGTCATCA",11,136.11,10.72,-0.12,0.03,2.97,1.05,0,"1 nonsynonymous","S184I",1
"lib2","SARS-CoV-2","AAAGACATCCGATAAT",6,11.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R G83V A105S",3
"lib2","SARS-CoV-2","AAAGACCACAAAATAC",2,99.25,10.55,-0.28,0.04,2.87,1.07,0,">1 nonsynonymous","S41E K87R N151L",3
"lib2","SARS-CoV-2","AAAGACCACAACATCA",7,5.3,NA,NA,NA,NA,NA,NA,"stop","P54E N120Q Y123* Q176Y K199T",5
"lib2","SARS-CoV-2","AAAGACCACTAGCACA",2,60.59,10.28,-0.56,0.04,2.86,1.03,0,">1 nonsynonymous","N1R C61G",2
"lib2","SARS-CoV-2","AAAGACCAGACTTAAT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I2V N58*",2
"lib2","SARS-CoV-2","AAAGACCATTTGATGT",23,245.96,10.85,0.01,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGACCCCCGCCTTT",2,3.09,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib2","SARS-CoV-2","AAAGACCCGTATCCCC",2,51.18,10.78,-0.05,0.08,2.91,1.09,0,">1 nonsynonymous","L5G S43Y",2
"lib2","SARS-CoV-2","AAAGACCGAAATGTAA",2,4.09,NA,NA,NA,NA,NA,NA,"stop","W106K S147L Y159*",3
"lib2","SARS-CoV-2","AAAGACCGACAACGAA",2,64.38,9.88,-0.96,0.05,2.45,1.02,0,">1 nonsynonymous","L38H D98N",2
"lib2","SARS-CoV-2","AAAGACCGATAAAAAC",4,150.1,9.43,-1.4,0.08,2.19,1.07,0,">1 nonsynonymous","C6F D90H T201P",3
"lib2","SARS-CoV-2","AAAGACCGATTTAGTT",4,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K Q84R G146P V173L",4
"lib2","SARS-CoV-2","AAAGACCTAATAAACC",8,56.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6W V32G P96S K128E E154H Y165F",6
"lib2","SARS-CoV-2","AAAGACCTACAAAAGC",2,95.32,10.84,0,0.06,2.93,1.1,0,"1 nonsynonymous","S147T",1
"lib2","SARS-CoV-2","AAAGACCTTAAAAAAA",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I Y119E K128D F167S",4
"lib2","SARS-CoV-2","AAAGACCTTGATTAAG",2,33.22,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F12S S45R S139F",3
"lib2","SARS-CoV-2","AAAGACCTTGTGCTCT",3,0,NA,NA,NA,NA,NA,NA,"stop","R25T D34L L95* V103L",4
"lib2","SARS-CoV-2","AAAGACGAAATAAATC",4,145.82,10.27,-0.57,0.03,2.75,1,0,"1 nonsynonymous","L131C",1
"lib2","SARS-CoV-2","AAAGACGAGTGAATTT",3,24.45,9.55,-1.28,0.12,2.11,1,0.01,">1 nonsynonymous","C49V T55L S200C",3
"lib2","SARS-CoV-2","AAAGACGCAATCATCC",21,410.35,10.32,-0.52,0.03,2.89,1.05,0,">1 nonsynonymous","L38P L122K",2
"lib2","SARS-CoV-2","AAAGACGCCCCCATGA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","S53* V103R G196R",3
"lib2","SARS-CoV-2","AAAGACGCGAAAATAA",3,71.2,10.25,-0.59,0.05,2.83,1.03,0,">1 nonsynonymous","D98N V173S",2
"lib2","SARS-CoV-2","AAAGACGCGCAAAATA",10,263.61,6,-4.84,1.45,1.5,1.15,0.01,">1 nonsynonymous","Y39M G174K P177G",3
"lib2","SARS-CoV-2","AAAGACGTAAACAATA",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S S69R",2
"lib2","SARS-CoV-2","AAAGACGTATTGTTGA",2,35.7,8.2,-2.63,0.15,2.36,1.08,0.01,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","AAAGACTAAACTACCA",4,94.56,10.14,-0.7,0.03,2.96,1.05,0,">1 nonsynonymous","C61A E154H",2
"lib2","SARS-CoV-2","AAAGACTATAGCACTA",2,8.75,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","L5S R25S Y93T S184R",4
"lib2","SARS-CoV-2","AAAGACTATAGGAAAG",7,50.8,6.09,-4.74,0.88,1.5,1.21,0.03,">1 nonsynonymous","L5T F47W Y91C S139C",4
"lib2","SARS-CoV-2","AAAGACTATGTGTCTC",12,5.4,NA,NA,NA,NA,NA,NA,"stop","N4S N13A W23* D59T T85N K132S",6
"lib2","SARS-CoV-2","AAAGACTCATCATTGG",3,36.11,10.84,0.01,0.07,3,1.04,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","AAAGACTCCACCGCAT",5,7.28,NA,NA,NA,NA,NA,NA,"stop","C49L K94H Y121* P161R",4
"lib2","SARS-CoV-2","AAAGACTCGAAACAAG",3,45.33,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8A G83L K114L Y159N",4
"lib2","SARS-CoV-2","AAAGACTCTCGAGGAC",4,31.14,7.05,-3.79,0.47,1.5,1.04,0.04,">1 nonsynonymous","W23H Y119V E141C",3
"lib2","SARS-CoV-2","AAAGACTCTGGTCGAA",4,17.19,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G9W I88F F99P P149L",4
"lib2","SARS-CoV-2","AAAGACTGAGTTTCGC",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I C61S I72E",3
"lib2","SARS-CoV-2","AAAGACTGATACACAC",8,40.07,6.18,-4.65,0.4,1.5,1.04,0,">1 nonsynonymous","D68L D90L L95H",3
"lib2","SARS-CoV-2","AAAGACTTAACAGAGT",9,168.55,10.82,-0.01,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGACTTAAGCCTAA",6,0.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","AAAGACTTATGTTGAA",1,50.93,10.5,-0.34,0.06,2.87,1.03,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","AAAGACTTCACTGAAG",3,37.3,10.84,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGACTTGGCGGTAA",2,9.23,7.18,-3.66,0.5,1.5,1.03,0.08,"1 nonsynonymous","P177H",1
"lib2","SARS-CoV-2","AAAGACTTTCCATCAT",4,10.03,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R25L Q84C P149C",3
"lib2","SARS-CoV-2","AAAGAGAAATAGCCAT",13,85.51,7.35,-3.48,0.27,1.5,1.18,0.02,">1 nonsynonymous","L5Q N107Y",2
"lib2","SARS-CoV-2","AAAGAGAAATGTCATA",5,84.77,10.81,-0.02,0.04,2.89,1.12,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","AAAGAGAAATGTGTAC",11,131.08,10.39,-0.45,0.03,2.85,1.05,0,">1 nonsynonymous","T3L S184F",2
"lib2","SARS-CoV-2","AAAGAGAACTATCATC",9,108.95,9.51,-1.33,0.07,2.17,1.01,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AAAGAGAATGCCTGTA",12,208.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T3N V20S F99Y N107C F126S",5
"lib2","SARS-CoV-2","AAAGAGAATTCAGGTT",5,83.58,6,-4.84,1.35,1.5,1.21,0.03,">1 nonsynonymous","V77W N120C",2
"lib2","SARS-CoV-2","AAAGAGACAAAAGAAT",7,104.82,8.73,-2.1,0.09,1.77,1.06,0,">1 nonsynonymous","R25S E141N N151I",3
"lib2","SARS-CoV-2","AAAGAGACATTTACGG",8,103.64,10.83,0,0.04,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGAGACCCATTAGT",1,1.7,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAGACCGTAACAC",9,78.61,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4D E10S G101S S200L",4
"lib2","SARS-CoV-2","AAAGAGAGAATGGCAA",1,0.68,NA,NA,NA,NA,NA,NA,"stop","L5T A33P N58R A81N L131S F167* S184G",7
"lib2","SARS-CoV-2","AAAGAGAGCGCAGACT",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L A14S A22M D59A P82T",5
"lib2","SARS-CoV-2","AAAGAGAGGCACCTGC",5,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L S41A Y91C",3
"lib2","SARS-CoV-2","AAAGAGATAAGGCCCG",2,16.73,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D68V N107R E135V",3
"lib2","SARS-CoV-2","AAAGAGATCTGAATTA",6,14.72,6,-4.84,2,3,1.08,0,">1 nonsynonymous","Y50I L95K Y121S N151S F185D",5
"lib2","SARS-CoV-2","AAAGAGATTAACATTT",4,30.99,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38F G86P N107L N120I G152T T201Y",6
"lib2","SARS-CoV-2","AAAGAGATTGACACTC",9,162.56,7.29,-3.55,0.14,1.54,1.12,0.01,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","AAAGAGCATAACAATA",8,171.74,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A18W A42T C61T Y119C P177T Y178M",6
"lib2","SARS-CoV-2","AAAGAGCCCCAGACCA",15,231.22,9.13,-1.7,0.08,2.64,1.09,0,">1 nonsynonymous","K56C E76D T85A Q168T",4
"lib2","SARS-CoV-2","AAAGAGCCGCATACAT",5,63.14,10.53,-0.31,0.07,2.92,1.1,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","AAAGAGCCTCTTACAC",5,49.6,10.86,0.02,0.04,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAGCCTTTAAATT",5,93.19,8.62,-2.22,0.08,2.77,1.1,0,">1 nonsynonymous","Y119M R136I",2
"lib2","SARS-CoV-2","AAAGAGCGATTATAAG",20,33.02,7.05,-3.78,0.38,1.5,1.13,0.04,">1 nonsynonymous","N13V K94G",2
"lib2","SARS-CoV-2","AAAGAGCGCTTTTAAG",1,5.42,9.57,-1.26,0.29,2.22,1.27,0.02,">1 nonsynonymous","W106R N120S",2
"lib2","SARS-CoV-2","AAAGAGCTCCAAGATT",4,61.31,10.9,0.07,0.05,2.95,1.05,0,">1 nonsynonymous","N1G F17W",2
"lib2","SARS-CoV-2","AAAGAGCTGTGGTATT",12,194.29,8.66,-2.18,0.08,2.47,1.08,0,">1 nonsynonymous","Y39S A89S Y143V V153N",4
"lib2","SARS-CoV-2","AAAGAGGAAGCCGAAC",6,0.62,NA,NA,NA,NA,NA,NA,"stop","C49Y L60M P96*",3
"lib2","SARS-CoV-2","AAAGAGGAGAAAACCC",12,117.41,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","I2H D34V P54Y C61H F99M W106C E141S Q176F",8
"lib2","SARS-CoV-2","AAAGAGGCAAAACTTG",2,32.54,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55M R73A I88G",3
"lib2","SARS-CoV-2","AAAGAGGCGCTAAGCA",2,51.7,9.58,-1.25,0.1,1.98,1.12,0,">1 nonsynonymous","N4K N24C T100S N151T",4
"lib2","SARS-CoV-2","AAAGAGGCTCCAAAAG",2,44.58,10.83,-0.01,0.09,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAGGCTTAAAACT",4,44.97,8.2,-2.64,0.29,1.5,1.07,0.03,">1 nonsynonymous","Y93I Q144N A190E",3
"lib2","SARS-CoV-2","AAAGAGGGAAATTTTT",9,153.63,10.71,-0.13,0.02,2.96,1.03,0,">1 nonsynonymous","A33M F160H",2
"lib2","SARS-CoV-2","AAAGAGGGCATATAAC",2,18.89,6.82,-4.02,0.5,1.5,1.09,0.03,">1 nonsynonymous","G86L S129R A190E",3
"lib2","SARS-CoV-2","AAAGAGGGGTCAGTGT",4,71.82,10.68,-0.16,0.07,2.91,1.05,0,"1 nonsynonymous","N151E",1
"lib2","SARS-CoV-2","AAAGAGGGTCAAAAAA",13,172.97,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","N92E",1
"lib2","SARS-CoV-2","AAAGAGGTTTAGTAAC",6,0.14,NA,NA,NA,NA,NA,NA,"stop","S69* N92W N130H",3
"lib2","SARS-CoV-2","AAAGAGTAACTAGAAC",2,20.78,9.92,-0.91,0.08,2.91,1.02,0,"1 nonsynonymous","N120F",1
"lib2","SARS-CoV-2","AAAGAGTAGGAAAGGT",5,45.04,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R25L G51T",2
"lib2","SARS-CoV-2","AAAGAGTAGTGTCCCT",4,150.19,10.84,0.01,0.02,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAGTATTCAACAT",9,9.06,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","E10L L95R G174W",3
"lib2","SARS-CoV-2","AAAGAGTATTGCCCTG",9,47.11,10.14,-0.7,0.09,2.54,1.03,0,">1 nonsynonymous","A14V D98T",2
"lib2","SARS-CoV-2","AAAGAGTCATTAAGAT",1,19.93,10.71,-0.13,0.06,2.89,1.1,0,">1 nonsynonymous","S41L L188T",2
"lib2","SARS-CoV-2","AAAGAGTGATACACGC",3,52.87,10.79,-0.04,0.03,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGAGTGTCTTTTAT",7,43.33,6.82,-4.02,0.25,1.52,1.12,0.01,">1 nonsynonymous","Y165S G174L",2
"lib2","SARS-CoV-2","AAAGAGTTTAAACATT",18,34.34,NA,NA,NA,NA,NA,NA,"stop","D68* V173S",2
"lib2","SARS-CoV-2","AAAGAGTTTCAAGAAA",4,93.08,10.1,-0.74,0.05,2.7,1.05,0,">1 nonsynonymous","D34L K87F H189D",3
"lib2","SARS-CoV-2","AAAGATAAAAGCAGTA",2,100.07,10.78,-0.06,0.07,2.84,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATAAACGAGTAT",10,152.12,10.73,-0.11,0.06,2.83,1.01,0,">1 nonsynonymous","A14K N120K",2
"lib2","SARS-CoV-2","AAAGATAAAGTAAAAG",1,16.5,8.29,-2.55,0.2,2.27,1.1,0.01,">1 nonsynonymous","V77Y T85H N107L",3
"lib2","SARS-CoV-2","AAAGATAAATTTTTGC",3,26.99,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","W23L K48P Q163P",3
"lib2","SARS-CoV-2","AAAGATAACCATCAGG",1,23.54,10.4,-0.44,0.07,2.87,1.1,0,">1 nonsynonymous","F44W D90S L125F",3
"lib2","SARS-CoV-2","AAAGATAAGACAGTAG",3,31.96,10.55,-0.28,0.1,2.9,1.02,0.01,">1 nonsynonymous","N24V S147A",2
"lib2","SARS-CoV-2","AAAGATAAGGTCTGAG",5,33.43,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","E10Q R124P",2
"lib2","SARS-CoV-2","AAAGATAAGTACGCGA",2,21.45,9.52,-1.31,0.09,1.95,1,0,">1 nonsynonymous","S43L D59G V181L",3
"lib2","SARS-CoV-2","AAAGATAATACGCACT",1,23.48,10.85,0.02,0.06,3,1.02,0,">1 nonsynonymous","S129E V153N K198S",3
"lib2","SARS-CoV-2","AAAGATAATAGAAGTT",7,12.88,7.94,-2.89,0.19,2.49,1.05,0.01,">1 nonsynonymous","L5P S53L S113L G166H",4
"lib2","SARS-CoV-2","AAAGATAATGCTAGAG",6,55.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L L125S C158N G172D",4
"lib2","SARS-CoV-2","AAAGATACATCTTCAG",3,21.39,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F17R G51D",2
"lib2","SARS-CoV-2","AAAGATACATTATTTA",5,112.06,10.67,-0.16,0.04,2.94,1.06,0,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","AAAGATACCCAACAAC",5,38.82,9.07,-1.76,0.22,1.5,1.13,0.02,">1 nonsynonymous","G9R D34R E141F P149F",4
"lib2","SARS-CoV-2","AAAGATACCCCTTAAA",6,43.7,10.63,-0.2,0.04,2.84,1.14,0,">1 nonsynonymous","T55G D97E N130D",3
"lib2","SARS-CoV-2","AAAGATACGTATGCCA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","D112* Y178G",2
"lib2","SARS-CoV-2","AAAGATACTAGGCATA",11,156.03,10.71,-0.13,0.03,2.99,1.03,0,">1 nonsynonymous","V37G T55I",2
"lib2","SARS-CoV-2","AAAGATACTGTCACAG",4,67.56,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G86T P149T C158R G166C",4
"lib2","SARS-CoV-2","AAAGATAGACCTCTAT",1,43.68,10.49,-0.34,0.06,2.91,1.06,0,">1 nonsynonymous","A33S N120S",2
"lib2","SARS-CoV-2","AAAGATAGCAATAAGT",1,102.39,6.2,-4.64,0.79,1.5,1.24,0.02,">1 nonsynonymous","K26S P54T S69L G116T",4
"lib2","SARS-CoV-2","AAAGATAGCTGTAAGT",3,0.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","AAAGATAGTACGTAAA",5,21.96,8.03,-2.81,0.2,1.5,1.24,0.01,">1 nonsynonymous","D112I L122C F160C",3
"lib2","SARS-CoV-2","AAAGATATAATAAACT",5,30.76,10.8,-0.03,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATATACCATGTA",2,7.83,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","V77L D90Y C102T Y143R",4
"lib2","SARS-CoV-2","AAAGATATCAAGGTAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7R T55I F126N Q163*",4
"lib2","SARS-CoV-2","AAAGATATTAACGCCG",4,32.27,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","L95Q P169T",2
"lib2","SARS-CoV-2","AAAGATATTATGAATA",5,45.18,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5Y K94Y S113L",3
"lib2","SARS-CoV-2","AAAGATATTGGTCTAA",2,24.97,10.92,0.09,0.08,2.9,1.08,0,">1 nonsynonymous","I2E S129V",2
"lib2","SARS-CoV-2","AAAGATCAAAATATAA",5,66.1,10.89,0.05,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATCAAATAATAT",2,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M Y93R",2
"lib2","SARS-CoV-2","AAAGATCAACATGCGA",5,20.11,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C6S L57F K94S G155S",4
"lib2","SARS-CoV-2","AAAGATCAATAGCGTA",2,9.37,6.7,-4.14,1.11,3,1.01,0,">1 nonsynonymous","N40Y S53P R136T L183G",4
"lib2","SARS-CoV-2","AAAGATCACAATGCAT",2,23.49,9.29,-1.55,0.18,1.84,1.03,0.02,">1 nonsynonymous","S45G K94Q K128N",3
"lib2","SARS-CoV-2","AAAGATCCAAGGGTAG",1,32.98,10.8,-0.03,0.07,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATCCCATTGAGC",3,15.32,9.95,-0.89,0.13,2.87,1.09,0.01,">1 nonsynonymous","F44G G174M",2
"lib2","SARS-CoV-2","AAAGATCCCTTCTTAG",9,262.66,9.38,-1.45,0.08,2.46,1.07,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","AAAGATCCTAAAAACA",3,8.61,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","AAAGATCCTACGGCTT",3,5.63,6.5,-4.34,0.52,3,1.1,0.02,">1 nonsynonymous","E10G T55R I72F S113L R136W C158L",6
"lib2","SARS-CoV-2","AAAGATCCTGATACCG",1,0.37,NA,NA,NA,NA,NA,NA,"stop","N1E G51V N58T T63S S108* S164R",6
"lib2","SARS-CoV-2","AAAGATCGACCTATAT",3,47.7,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y21E G51E K87T N92Y C158F",5
"lib2","SARS-CoV-2","AAAGATCTAAACGCAA",7,64.63,9.51,-1.33,0.08,1.93,1.06,0,">1 nonsynonymous","E10C P149L S164F",3
"lib2","SARS-CoV-2","AAAGATCTAATCGATT",2,7.72,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","P82H D98Y D112C V173C",4
"lib2","SARS-CoV-2","AAAGATGAACACCAGT",2,28.47,10.11,-0.73,0.12,2.07,1.06,0.01,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","AAAGATGAAGAAACAA",1,15.59,10.27,-0.57,0.1,2.72,1.02,0.01,">1 nonsynonymous","N58L E141M",2
"lib2","SARS-CoV-2","AAAGATGAGATTATTG",3,76.1,10.78,-0.06,0.06,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGATGAGGTATAAG",5,27.34,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D34L T55Q Y93L R179A",4
"lib2","SARS-CoV-2","AAAGATGATTTATAAC",4,0.26,NA,NA,NA,NA,NA,NA,"stop","F70* A89H G152S Y165F",4
"lib2","SARS-CoV-2","AAAGATGCAAATTCCT",7,125.63,10.75,-0.08,0.03,2.94,1.07,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","AAAGATGCCGTCGAAA",3,115.44,10.77,-0.07,0.04,2.95,1.06,0,"1 nonsynonymous","E186T",1
"lib2","SARS-CoV-2","AAAGATGCGAAATCAT",4,19.55,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N4V D59L I88N V115M",4
"lib2","SARS-CoV-2","AAAGATGCGGGCACAG",4,14.76,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V20R Y35N F126W",3
"lib2","SARS-CoV-2","AAAGATGGTGTTAAAA",15,77.05,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S19V K56R C61L L95K S139E",5
"lib2","SARS-CoV-2","AAAGATGTCATACGGA",2,133.21,9.92,-0.92,0.04,2.94,1.07,0,">1 nonsynonymous","I28F Q176L K199D",3
"lib2","SARS-CoV-2","AAAGATGTTCGACAAC",10,210.65,10.09,-0.75,0.05,2.47,1.04,0,">1 nonsynonymous","I2A A89I",2
"lib2","SARS-CoV-2","AAAGATTAACTCCCGA",5,97.84,10.79,-0.05,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATTAAGATATGA",4,14.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L38D K48I I142N",3
"lib2","SARS-CoV-2","AAAGATTAGATCTCTT",3,39.14,9.64,-1.19,0.07,2.79,1.06,0,">1 nonsynonymous","N151I P169F",2
"lib2","SARS-CoV-2","AAAGATTATAACACAA",2,12.09,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D90K T100I A105G E154L R179L",5
"lib2","SARS-CoV-2","AAAGATTATTAACAAA",1,1.42,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAGATTCCTCAAACG",4,62.74,10.17,-0.66,0.08,2.63,1.03,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","AAAGATTGAGAACAAA",11,91.36,10.81,-0.03,0.05,2.95,1.05,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","AAAGATTGCTGCTGTA",8,222.48,10.46,-0.38,0.04,2.94,1.04,0,"1 nonsynonymous","S164G",1
"lib2","SARS-CoV-2","AAAGATTTGAAAACAA",11,183.88,10.72,-0.12,0.03,2.96,1.06,0,">1 nonsynonymous","G196W T201M",2
"lib2","SARS-CoV-2","AAAGCAAAAACCATTA",18,419.12,10.85,0.01,0.04,2.92,1.1,0,">1 nonsynonymous","L122A N151D",2
"lib2","SARS-CoV-2","AAAGCAAAACCCCGTT",3,49.45,9.34,-1.5,0.2,1.5,1,0.02,">1 nonsynonymous","G51S E76S",2
"lib2","SARS-CoV-2","AAAGCAAAACGGCGTA",1,24.67,9.74,-1.1,0.07,2.9,1.06,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","AAAGCAAACATCCATG",7,49.41,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L60D R127E V173R",3
"lib2","SARS-CoV-2","AAAGCAAACCTACACT",5,0.62,NA,NA,NA,NA,NA,NA,"stop","L57A C61* N118R T201Y",4
"lib2","SARS-CoV-2","AAAGCAAATAACAAAT",11,0.57,NA,NA,NA,NA,NA,NA,"stop","C49G F156S T201*",3
"lib2","SARS-CoV-2","AAAGCAACAAACGCGA",3,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E L95M N110M L122Q P197N",5
"lib2","SARS-CoV-2","AAAGCAACAACTCGGT",11,137.2,10.19,-0.65,0.06,2.62,1.04,0,">1 nonsynonymous","P7M N40A S53R",3
"lib2","SARS-CoV-2","AAAGCAACGCCCACAT",1,8.69,10.44,-0.4,0.13,2.95,1.02,0,">1 nonsynonymous","N4R T15G S43W",3
"lib2","SARS-CoV-2","AAAGCAACGTCTGATA",2,58.22,10.43,-0.4,0.05,2.87,1.04,0,">1 nonsynonymous","D34C K56T",2
"lib2","SARS-CoV-2","AAAGCAACTGAGAATT",2,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I D112L",2
"lib2","SARS-CoV-2","AAAGCAACTGTTGGAG",1,39.23,9.02,-1.82,0.13,1.59,1.05,0,">1 nonsynonymous","G9A V32S Q84N S129A L162M",5
"lib2","SARS-CoV-2","AAAGCAAGAAATAATA",14,157.93,9.31,-1.52,0.05,1.87,1.05,0,">1 nonsynonymous","I28E I138N",2
"lib2","SARS-CoV-2","AAAGCAAGCCCTCTCT",2,43.45,10.29,-0.55,0.07,2.76,1.04,0,">1 nonsynonymous","R25T L122G",2
"lib2","SARS-CoV-2","AAAGCAAGTAGTAGCG",3,29.19,10.89,0.05,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCAAGTCATGTCT",2,51.9,10.69,-0.15,0.05,3,1.01,0,">1 nonsynonymous","V37L D59W N151R",3
"lib2","SARS-CoV-2","AAAGCAATAGGCACGA",5,10.48,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","Y35A P82M A105T L131P E186F",5
"lib2","SARS-CoV-2","AAAGCAATATAAATAG",2,32.29,10.61,-0.23,0.05,2.79,1.22,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","AAAGCAATATTATATA",5,27.95,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F70I T148R E154M",3
"lib2","SARS-CoV-2","AAAGCAATCAATAAGA",7,95.91,10.13,-0.71,0.03,2.93,1.05,0,">1 nonsynonymous","K48T G146D",2
"lib2","SARS-CoV-2","AAAGCAATTAATTGCT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","T3S T100P G172*",3
"lib2","SARS-CoV-2","AAAGCAATTGGACCAA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","T3G C61W I104N P133*",4
"lib2","SARS-CoV-2","AAAGCAATTTTAAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H F134T T140K",3
"lib2","SARS-CoV-2","AAAGCACAAAAAACTG",6,67.49,10.18,-0.65,0.11,2.66,1,0,"1 nonsynonymous","P133W",1
"lib2","SARS-CoV-2","AAAGCACACTAGCGGG",4,186.7,9.07,-1.76,0.06,2.64,1.09,0,">1 nonsynonymous","G9L G152S G174W",3
"lib2","SARS-CoV-2","AAAGCACAGTCGGGAA",3,30.2,9.84,-1,0.15,2.38,1.13,0.01,">1 nonsynonymous","S41N L162Q",2
"lib2","SARS-CoV-2","AAAGCACATTAACCAA",2,11.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G83I D137S K198A",3
"lib2","SARS-CoV-2","AAAGCACATTCTGGTG",3,17.39,6.92,-3.92,0.17,1.5,1.06,0.01,">1 nonsynonymous","T15E K87C Y119R Q176L",4
"lib2","SARS-CoV-2","AAAGCACCAGGGACAT",18,329.85,10.83,0,0.03,2.93,1.08,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","AAAGCACCCTTAAATA",5,6.56,NA,NA,NA,NA,NA,NA,"stop","L5F P54F E76* F99L P177T",5
"lib2","SARS-CoV-2","AAAGCACGAACCAAAG",13,130.17,7.45,-3.38,0.09,2.02,1.1,0,"1 nonsynonymous","C150S",1
"lib2","SARS-CoV-2","AAAGCACGAGGCCGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R L95M V103G",3
"lib2","SARS-CoV-2","AAAGCACGTAACACTA",6,16.97,6.38,-4.46,0.96,3,1.1,0.01,">1 nonsynonymous","A18L Y91I W106G",3
"lib2","SARS-CoV-2","AAAGCACTAAGAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V I142* K199S",3
"lib2","SARS-CoV-2","AAAGCACTACACTGAT",11,115.61,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G51F I88V L95M",3
"lib2","SARS-CoV-2","AAAGCACTATACTATA",5,164.24,9.93,-0.91,0.06,2.53,1.07,0,">1 nonsynonymous","K56V N64L Q84I",3
"lib2","SARS-CoV-2","AAAGCACTGGTGATGT",9,25.34,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5G A33V G101A S113A L122C",5
"lib2","SARS-CoV-2","AAAGCACTTCCCCTCC",4,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V I88E N107S",3
"lib2","SARS-CoV-2","AAAGCACTTCTTGAAC",9,122.87,10.81,-0.03,0.05,2.93,1.09,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","AAAGCAGAAACGTGAA",11,79.98,9.29,-1.54,0.12,1.5,1.06,0.01,">1 nonsynonymous","T55V C102M E141Y",3
"lib2","SARS-CoV-2","AAAGCAGAACCTTATC",8,113.43,10.78,-0.06,0.04,2.96,1.06,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","AAAGCAGAGGTCAACC",14,77.42,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L57F G86I F99P R127N",4
"lib2","SARS-CoV-2","AAAGCAGCCCCTTGGC",5,129.18,10.85,0.02,0.06,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCAGGCGTATTAA",3,17.91,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14T N30M V71R G86M",4
"lib2","SARS-CoV-2","AAAGCAGTGTGCAGGT",2,12.12,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","T3S E10Y N24H G86L",4
"lib2","SARS-CoV-2","AAAGCAGTTTCTACAG",4,21.43,6.6,-4.23,0.3,1.5,1.1,0.01,">1 nonsynonymous","F17G S36I R136L",3
"lib2","SARS-CoV-2","AAAGCATAAATTAACA",1,69.15,8.3,-2.54,0.11,1.9,1.14,0.01,">1 nonsynonymous","A67Y N151I T170S",3
"lib2","SARS-CoV-2","AAAGCATAAGCCAACT",5,0.4,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib2","SARS-CoV-2","AAAGCATAATGGGTAC",3,26.51,10.62,-0.22,0.09,2.97,1.01,0,"1 nonsynonymous","S45K",1
"lib2","SARS-CoV-2","AAAGCATAGTTAACAG",3,98.82,9.01,-1.83,0.07,2.79,1.11,0,">1 nonsynonymous","S45V F156N",2
"lib2","SARS-CoV-2","AAAGCATATTACGATA",8,113.43,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F17C W106M K114V R127S P161C Y178A",6
"lib2","SARS-CoV-2","AAAGCATCTAGAGACA",4,13.57,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14D F47G K56V",3
"lib2","SARS-CoV-2","AAAGCATCTTATATAA",1,27.32,10.75,-0.09,0.11,2.85,1.17,0.01,"1 nonsynonymous","V32F",1
"lib2","SARS-CoV-2","AAAGCATGACCCTTGC",2,17.29,6.12,-4.72,1.05,1.5,1.16,0.03,">1 nonsynonymous","F47N Y66D",2
"lib2","SARS-CoV-2","AAAGCATGGGCAAAAT",1,7.62,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N107Y G117V",2
"lib2","SARS-CoV-2","AAAGCATGGTTAAAAA",10,136.02,9.09,-1.74,0.06,2.89,1.06,0,">1 nonsynonymous","E154G G166W",2
"lib2","SARS-CoV-2","AAAGCATTCGAGTCAT",11,165.87,10.78,-0.06,0.05,2.82,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCATTGATTAAAC",20,157.4,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N118K L131S",2
"lib2","SARS-CoV-2","AAAGCATTTTAGATCA",6,108.19,9.87,-0.97,0.11,2.31,1,0,">1 nonsynonymous","C6M N109L",2
"lib2","SARS-CoV-2","AAAGCCAAAAGCACAG",4,122.45,9,-1.83,0.04,2.39,1.08,0,">1 nonsynonymous","N118V K132F",2
"lib2","SARS-CoV-2","AAAGCCAAAATTCGTA",4,48.71,8.63,-2.21,0.14,2.48,1.02,0.01,">1 nonsynonymous","E135M T170L A190T T201Q",4
"lib2","SARS-CoV-2","AAAGCCAACAAATGTA",2,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A145T Y175M V180S",3
"lib2","SARS-CoV-2","AAAGCCAACAATTTGG",7,63.31,10.4,-0.44,0.03,2.9,1.01,0,">1 nonsynonymous","R27L F44A",2
"lib2","SARS-CoV-2","AAAGCCAAGGGCCTAT",2,99.47,10.85,0.02,0.04,2.87,1.09,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","AAAGCCACCGAACTTC",9,69.68,6,-4.84,1.71,1.5,1.08,0,">1 nonsynonymous","C150G G174T",2
"lib2","SARS-CoV-2","AAAGCCACCTATTGGT",3,26.68,7.75,-3.09,0.37,1.5,1.01,0.05,">1 nonsynonymous","S36D S45M N58K N107P Y121K",5
"lib2","SARS-CoV-2","AAAGCCAGAGATCCGC",4,53.35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A33H D59H I80M N118P L122H N151M S184N",7
"lib2","SARS-CoV-2","AAAGCCAGAGTACAAC",2,1.05,NA,NA,NA,NA,NA,NA,"stop","Y50T K128L T148S Y178*",4
"lib2","SARS-CoV-2","AAAGCCAGTAAACAAA",3,101.22,10.24,-0.6,0.04,2.91,1.01,0,">1 nonsynonymous","Y39N D90T",2
"lib2","SARS-CoV-2","AAAGCCAGTAAGTTCC",2,89.82,8.23,-2.61,0.11,1.96,1.2,0.01,">1 nonsynonymous","D98S G146I",2
"lib2","SARS-CoV-2","AAAGCCATACCCTTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","D34P A81S G86*",3
"lib2","SARS-CoV-2","AAAGCCATAGACCAAC",5,165.35,10.59,-0.24,0.04,2.9,1.06,0,">1 nonsynonymous","F47L T201E",2
"lib2","SARS-CoV-2","AAAGCCATGAAAGCAA",5,33.82,8.03,-2.81,0.17,1.84,1.15,0.01,">1 nonsynonymous","E10L T46I V77L N118L",4
"lib2","SARS-CoV-2","AAAGCCATGACTCCCT",3,15.53,10.42,-0.41,0.06,2.99,1.02,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","AAAGCCATGTCATAAA",12,105.82,10.5,-0.34,0.03,2.92,1.09,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","AAAGCCATTTCAAGTC",5,27.31,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","I2V F99Q",2
"lib2","SARS-CoV-2","AAAGCCCAAAAACGGA",3,90.02,10.73,-0.11,0.04,2.91,1.1,0,">1 nonsynonymous","S139G Y143F K199L",3
"lib2","SARS-CoV-2","AAAGCCCACATGCGAC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","V11N A33N N120*",3
"lib2","SARS-CoV-2","AAAGCCCATTTCAGAG",5,89.46,9.18,-1.66,0.07,2.78,1.15,0,">1 nonsynonymous","N120P S129N",2
"lib2","SARS-CoV-2","AAAGCCCCACAACGAA",1,12.74,8.08,-2.75,0.24,1.77,1.13,0.02,">1 nonsynonymous","N107A P133K S200R",3
"lib2","SARS-CoV-2","AAAGCCCGACGTATCC",3,20.45,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","T3R Y66S W106P Y121M",4
"lib2","SARS-CoV-2","AAAGCCCTATGATTAA",6,90.41,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y35V F70V K94N N107C Y143R",5
"lib2","SARS-CoV-2","AAAGCCCTATTAGGAC",2,10.79,9.88,-0.96,0.15,2.21,1,0.02,">1 nonsynonymous","D97F Y121N",2
"lib2","SARS-CoV-2","AAAGCCCTCGCCACAA",7,31.95,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A33D V52N R136A P149S Q168A",5
"lib2","SARS-CoV-2","AAAGCCCTCTCATGAT",5,60.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y91G N107L P197T",3
"lib2","SARS-CoV-2","AAAGCCCTTCAAACAG",7,116.03,9.24,-1.6,0.07,2.01,1.06,0,">1 nonsynonymous","S19Q L122S R136S",3
"lib2","SARS-CoV-2","AAAGCCGAGTCAAAAG",4,34.11,10.22,-0.61,0.06,2.84,1.12,0,">1 nonsynonymous","P7L G83F",2
"lib2","SARS-CoV-2","AAAGCCGATAACATAT",6,171.63,10.55,-0.29,0.06,2.93,1.03,0,">1 nonsynonymous","F44I L122I",2
"lib2","SARS-CoV-2","AAAGCCGATAATATGG",2,22.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10T D98V D112R R127A P197L",5
"lib2","SARS-CoV-2","AAAGCCGCGGCGTTAG",10,2.08,NA,NA,NA,NA,NA,NA,"stop","V20R L122I N151* Q176C",4
"lib2","SARS-CoV-2","AAAGCCGCTTGTGCCG",4,74.09,10.79,-0.05,0.05,2.9,1.11,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","AAAGCCGGAAAGTTAG",1,16.81,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G86M I104F Y175L R179S",4
"lib2","SARS-CoV-2","AAAGCCGTAATACAAA",2,40.06,10.6,-0.23,0.06,2.95,1.02,0,">1 nonsynonymous","D97Q K114L",2
"lib2","SARS-CoV-2","AAAGCCTAATTATTCG",9,62.06,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N58Y G74M T100W G152T Q168A",5
"lib2","SARS-CoV-2","AAAGCCTGATCACATA",6,41.58,10.6,-0.23,0.14,2.71,1.28,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCCTGCGGAATTA",4,25.59,6.62,-4.21,0.23,1.5,1.09,0.01,">1 nonsynonymous","K87S D137R S184V",3
"lib2","SARS-CoV-2","AAAGCCTGCTGTCTAA",4,98.7,10.48,-0.35,0.05,2.94,1.05,0,"1 nonsynonymous","Y35T",1
"lib2","SARS-CoV-2","AAAGCCTGTGTGATAC",3,22.52,10.73,-0.11,0.07,2.97,1.08,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","AAAGCCTTAAATAATT",9,111.63,10.88,0.04,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCCTTACATGTAC",1,34.55,10.84,0,0.05,3,1,0,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","AAAGCCTTTCTACGCT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCGAAATTTATAT",2,59.66,10.31,-0.52,0.06,2.98,1.04,0,">1 nonsynonymous","L60R K87V N130I E141R",4
"lib2","SARS-CoV-2","AAAGCGAACTAATTGC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","A42D F62I F99Y F156A V181T T201*",6
"lib2","SARS-CoV-2","AAAGCGAAGATATGAA",4,1.13,NA,NA,NA,NA,NA,NA,"stop","S53V Y175*",2
"lib2","SARS-CoV-2","AAAGCGAATGGCCGAA",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D V103L",2
"lib2","SARS-CoV-2","AAAGCGACAGCATACT",1,65.49,8.75,-2.09,0.08,1.93,1.08,0,">1 nonsynonymous","N118H Y123M E141C Y175W",4
"lib2","SARS-CoV-2","AAAGCGACCGCATAAC",5,163.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36T A89R F185P",3
"lib2","SARS-CoV-2","AAAGCGACTATGCTTT",2,10.73,6,-4.84,2,1.5,1.05,0.03,">1 nonsynonymous","V103E R127P N157V G172W",4
"lib2","SARS-CoV-2","AAAGCGATTATAATAG",7,96.72,10.7,-0.14,0.04,2.9,1.08,0,">1 nonsynonymous","F44I T100Y",2
"lib2","SARS-CoV-2","AAAGCGCACTAACTGG",10,273.01,8.18,-2.66,0.1,1.62,1.1,0,">1 nonsynonymous","R16K I138P Q176L",3
"lib2","SARS-CoV-2","AAAGCGCATTTGCTGG",3,1.72,NA,NA,NA,NA,NA,NA,"stop","E10* C61L G166N",3
"lib2","SARS-CoV-2","AAAGCGCCTATCTCAA",20,78.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4Y I72R T85R G155H V182F",5
"lib2","SARS-CoV-2","AAAGCGCGCGAAAGGC",3,55.73,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48R F62Q A81Y Y93R N107S G152V C158T",7
"lib2","SARS-CoV-2","AAAGCGCTATTCACAT",1,0.88,NA,NA,NA,NA,NA,NA,"stop","I2L P96F S129*",3
"lib2","SARS-CoV-2","AAAGCGCTTTACACGT",1,11.38,9.2,-1.64,0.25,1.74,1.08,0.04,">1 nonsynonymous","S53L L60H Q84D",3
"lib2","SARS-CoV-2","AAAGCGGACAAAACCC",6,96.3,10.26,-0.57,0.04,2.78,1.14,0,">1 nonsynonymous","N92S L122K F156A",3
"lib2","SARS-CoV-2","AAAGCGGCCAGGGGCA",4,98.05,8.74,-2.1,0.14,1.67,1.09,0.01,">1 nonsynonymous","V37C D90S E135C",3
"lib2","SARS-CoV-2","AAAGCGGGGAATAGCA",7,32.27,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","A42F N58Y R73A D90R N120A P161S T170S",7
"lib2","SARS-CoV-2","AAAGCGGGGTACAATA",7,48.97,9.45,-1.39,0.01,2.98,1.02,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","AAAGCGTTCCATAAAC",1,9.31,6,-4.84,2,3,1.02,0,">1 nonsynonymous","S45C G51V D90T",3
"lib2","SARS-CoV-2","AAAGCGTTGTTTTACT",5,80.61,8.43,-2.41,0.12,2.53,1.04,0.01,">1 nonsynonymous","N107E G116R",2
"lib2","SARS-CoV-2","AAAGCTAAATATAATT",12,45.2,10.47,-0.36,0.06,3,1,0,">1 nonsynonymous","P7S S129Y",2
"lib2","SARS-CoV-2","AAAGCTAACAAAATAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43A",1
"lib2","SARS-CoV-2","AAAGCTAACCGCCAGA",3,31.15,10.78,-0.06,0.06,2.99,1.01,0,"1 nonsynonymous","F160M",1
"lib2","SARS-CoV-2","AAAGCTAACGTCTACT",2,13.96,10.08,-0.76,0.1,2.89,1,0,">1 nonsynonymous","F12V S53I F160V S200V",4
"lib2","SARS-CoV-2","AAAGCTAATGCGACGC",2,26.63,9.53,-1.3,0.42,1.95,1.23,0.07,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCTAATGTCTAAT",1,22.97,7.58,-3.25,0.4,1.5,1.02,0.05,">1 nonsynonymous","I28K N40M",2
"lib2","SARS-CoV-2","AAAGCTACAAACTCTA",2,50.63,10.88,0.05,0.04,2.98,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCTACCAAAGTCA",1,25.5,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N1S R27Q Y66E D98Y F134D Y143I",6
"lib2","SARS-CoV-2","AAAGCTACCCGCCATG",2,32.58,10.25,-0.59,0.15,1.75,1.07,0.01,">1 nonsynonymous","I28Q T140G P197T",3
"lib2","SARS-CoV-2","AAAGCTACTGTACTCT",4,1.22,NA,NA,NA,NA,NA,NA,"stop","W23G Y35T Y66L V115*",4
"lib2","SARS-CoV-2","AAAGCTACTTATATCG",1,10.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y39V P54C L125A Y175R",4
"lib2","SARS-CoV-2","AAAGCTAGATTTACTA",9,20.78,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5H A14Y G172R",3
"lib2","SARS-CoV-2","AAAGCTAGCTAAAGCA",3,22.81,10.15,-0.69,0.08,2.47,1.01,0,">1 nonsynonymous","S29W F44K",2
"lib2","SARS-CoV-2","AAAGCTAGGATTAATA",3,9.26,7.23,-3.61,0.52,1.5,1.34,0.04,">1 nonsynonymous","S43L G101A L122S S129T",4
"lib2","SARS-CoV-2","AAAGCTAGTAGAAAAA",2,13.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120K S164R",2
"lib2","SARS-CoV-2","AAAGCTAGTATAAAAT",4,10.36,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","V71G R124N I142Q T148E",4
"lib2","SARS-CoV-2","AAAGCTATATAATTTG",6,69.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y121R S129I G155V",3
"lib2","SARS-CoV-2","AAAGCTATGGTCTCAA",10,195.25,10.62,-0.21,0.03,2.94,1.07,0,"1 nonsynonymous","K87H",1
"lib2","SARS-CoV-2","AAAGCTATTTTCTGAA",7,94.73,9.14,-1.7,0.1,1.74,1.13,0,">1 nonsynonymous","I72C T100H S139M",3
"lib2","SARS-CoV-2","AAAGCTCAAAAACATA",6,44.27,6.39,-4.45,0.42,1.5,1.18,0.01,">1 nonsynonymous","P82N P169M",2
"lib2","SARS-CoV-2","AAAGCTCAAACATATG",5,43.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W106G Y119T Q144I H189V",4
"lib2","SARS-CoV-2","AAAGCTCAAAGGGATA",5,21.87,7.37,-3.47,0.3,1.5,1.07,0.03,">1 nonsynonymous","G51N C61G P96M G146S",4
"lib2","SARS-CoV-2","AAAGCTCATAATATTG",3,17.67,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D34S T55A A105T Y159R",4
"lib2","SARS-CoV-2","AAAGCTCATAGTACCA",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P Y121W E141R",3
"lib2","SARS-CoV-2","AAAGCTCATTCTAACA",4,36.77,9.47,-1.37,0.09,2,1.04,0,">1 nonsynonymous","Y39S S45R D90C",3
"lib2","SARS-CoV-2","AAAGCTCCTCTACTAC",2,24.78,6.17,-4.67,0.55,3,1.06,0.01,">1 nonsynonymous","Y35S A89K D98A P161R G172F",5
"lib2","SARS-CoV-2","AAAGCTCGACTTGCAC",1,20.66,10.22,-0.62,0.1,2.72,1.13,0,">1 nonsynonymous","D59T R136V P197Q",3
"lib2","SARS-CoV-2","AAAGCTCGAGCCGTTT",2,56.88,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","R25Q N92G L122G G152T",4
"lib2","SARS-CoV-2","AAAGCTCGCCAATTCC",4,22.57,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C61I V182G L183I",3
"lib2","SARS-CoV-2","AAAGCTCTAACCCCAG",8,233.55,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","C61A K128L S139C P177H",4
"lib2","SARS-CoV-2","AAAGCTCTCACCCGAC",5,68.42,8.99,-1.84,0.08,1.73,1.11,0,">1 nonsynonymous","A42G D59V A89V E141K",4
"lib2","SARS-CoV-2","AAAGCTCTCATGACTT",8,137.66,10.85,0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCTCTCTGTCCAA",16,212.43,10.83,-0.01,0.05,2.92,1.09,0,">1 nonsynonymous","S129N S200V",2
"lib2","SARS-CoV-2","AAAGCTCTCTTGACGC",3,45.81,8.31,-2.52,0.22,1.64,1.13,0.02,">1 nonsynonymous","Y66D N110V Q168K",3
"lib2","SARS-CoV-2","AAAGCTCTGACACGCA",1,22.64,10.72,-0.12,0.08,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCTGAACTAATAC",2,16.62,7.3,-3.53,0.26,1.5,1.06,0.03,">1 nonsynonymous","G9K S36L K94D",3
"lib2","SARS-CoV-2","AAAGCTGAATAAACCT",9,63.06,9.04,-1.79,0.08,1.74,1.06,0,">1 nonsynonymous","N40M K56R F62G N107A F134Y",5
"lib2","SARS-CoV-2","AAAGCTGACAATAAAT",3,11.06,9.79,-1.04,0.16,2.39,1.06,0.02,">1 nonsynonymous","V20A T85S D98P",3
"lib2","SARS-CoV-2","AAAGCTGACGCTAATG",3,99.17,10.72,-0.12,0.03,2.9,1.1,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","AAAGCTGAGGTACCAG",2,6.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E S69R I88R P149T S200Y",5
"lib2","SARS-CoV-2","AAAGCTGCCATTATAA",4,108.38,10.09,-0.75,0.03,2.94,1.03,0,">1 nonsynonymous","G174K S184L",2
"lib2","SARS-CoV-2","AAAGCTGCGCCAGGTG",2,42.72,10.79,-0.05,0.07,2.89,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGCTGTGGATAAGT",1,32.72,6.23,-4.6,0.59,1.5,1.07,0.02,">1 nonsynonymous","G51M K56P Y119S",3
"lib2","SARS-CoV-2","AAAGCTTACTCTACTG",12,168.7,9.22,-1.62,0.02,2.94,1.08,0,">1 nonsynonymous","S36W Y119Q",2
"lib2","SARS-CoV-2","AAAGCTTCTCTATATT",9,4.56,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib2","SARS-CoV-2","AAAGCTTGAAATCCGA",2,39.43,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G83D V103I Y143T T201I",4
"lib2","SARS-CoV-2","AAAGCTTGCACTTTTG",9,94.96,10.05,-0.78,0.06,2.61,1.05,0,">1 nonsynonymous","Y39E P133S T148F",3
"lib2","SARS-CoV-2","AAAGCTTGTGAATAGC",3,41.94,7.8,-3.04,0.21,1.58,1.09,0.01,"1 nonsynonymous","L162E",1
"lib2","SARS-CoV-2","AAAGCTTTAACAGCGA",2,17.06,9.99,-0.85,0.14,2.28,1,0.01,">1 nonsynonymous","N1G G9V Y178S",3
"lib2","SARS-CoV-2","AAAGCTTTCAGCACTT",1,17.54,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","R27C F44V G51R N92V S129Q A190L",6
"lib2","SARS-CoV-2","AAAGCTTTGAATATTC",12,69.8,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","W106P",1
"lib2","SARS-CoV-2","AAAGCTTTGGACCACG",3,49.64,10.58,-0.25,0.06,2.98,1,0,">1 nonsynonymous","L122H N130D F160V",3
"lib2","SARS-CoV-2","AAAGGAAAAAATGAAG",4,42.28,6.18,-4.66,0.56,1.5,1.15,0.01,">1 nonsynonymous","V11R Y123I G146K",3
"lib2","SARS-CoV-2","AAAGGAAAAACTCAGT",1,19.95,10.83,-0.01,0.09,2.98,1.01,0,">1 nonsynonymous","N64P E154S",2
"lib2","SARS-CoV-2","AAAGGAAAAATCTAGT",6,89.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40K T63P R124T",3
"lib2","SARS-CoV-2","AAAGGAAAATAACGGA",3,66.46,10.09,-0.74,0.07,2.57,1.03,0,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","AAAGGAAAATTAAAAG",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C D112T",2
"lib2","SARS-CoV-2","AAAGGAAACATTCAGC",1,20.13,9.8,-1.04,0.12,2.12,1.14,0.01,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","AAAGGAAACGCACACG",4,156.89,10.7,-0.14,0.04,2.93,1.07,0,">1 nonsynonymous","V37K Y143H",2
"lib2","SARS-CoV-2","AAAGGAAATAACCGTG",4,96.16,10.29,-0.55,0.06,2.68,1.09,0,">1 nonsynonymous","E10P S36E D97S P149M",4
"lib2","SARS-CoV-2","AAAGGAAATCTAACAT",4,7.83,6,-4.84,2,1.5,1.04,0.05,">1 nonsynonymous","A14S F99C Y123I",3
"lib2","SARS-CoV-2","AAAGGAAATGTCGATA",3,52.16,9.26,-1.58,0.11,2.05,1.09,0.01,">1 nonsynonymous","A14P F44N",2
"lib2","SARS-CoV-2","AAAGGAACTCCCAAAG",1,480.88,10.48,-0.35,0.03,2.93,1.02,0,">1 nonsynonymous","Y39S L60M T100A",3
"lib2","SARS-CoV-2","AAAGGAAGCTAGTCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143M G155*",2
"lib2","SARS-CoV-2","AAAGGAATATAATACA",9,187.82,10.79,-0.05,0.03,2.96,1.04,0,">1 nonsynonymous","S41R H189N",2
"lib2","SARS-CoV-2","AAAGGAATGTTTATAC",12,1.28,NA,NA,NA,NA,NA,NA,"stop","P7I V77T V103N P149* S184L T201P",6
"lib2","SARS-CoV-2","AAAGGAATTAGCTACT",5,41.44,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","E10L T15S G51V I138S G174S F185L",6
"lib2","SARS-CoV-2","AAAGGACAAAAATATG",1,13.2,9.88,-0.95,0.03,3,1,0,">1 nonsynonymous","F62S S139R G174Q",3
"lib2","SARS-CoV-2","AAAGGACACAAAATTT",12,65.5,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C61R E76A Q84C R136A G196M",5
"lib2","SARS-CoV-2","AAAGGACAGAATTGTC",9,167.28,10.07,-0.76,0.07,2.54,1.08,0,">1 nonsynonymous","T55S P96R",2
"lib2","SARS-CoV-2","AAAGGACCAGGGGCTT",16,90.67,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D59P D68L K87P",3
"lib2","SARS-CoV-2","AAAGGACCTACTTTAA",2,18.12,9.38,-1.46,0.19,2.16,1.04,0.02,">1 nonsynonymous","Q84T P161Q",2
"lib2","SARS-CoV-2","AAAGGACCTTGGACAG",9,82.16,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F44L C61A N107R V180Y",4
"lib2","SARS-CoV-2","AAAGGACTAAGTCAAG",7,10.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1Y Y93T K198Q",3
"lib2","SARS-CoV-2","AAAGGACTATAAAATA",5,74.57,10.04,-0.79,0.06,2.47,1,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","AAAGGACTATGCTTTT",15,4.1,NA,NA,NA,NA,NA,NA,"stop","F62S V71T L131Q T201*",4
"lib2","SARS-CoV-2","AAAGGACTCCAATAAT",4,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47T I104N N120K E141A T170L",5
"lib2","SARS-CoV-2","AAAGGACTCGCCAGAA",2,46.64,10.86,0.02,0.06,2.91,1.09,0,"1 nonsynonymous","L162I",1
"lib2","SARS-CoV-2","AAAGGACTGCAAAAAA",16,102.06,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","F17L A81H L95N Q144W C150L",5
"lib2","SARS-CoV-2","AAAGGACTTGAAGACA",11,251.19,10.88,0.04,0.05,2.94,1.07,0,"1 nonsynonymous","N130V",1
"lib2","SARS-CoV-2","AAAGGACTTTGACTTA",8,136.43,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N4K Y50S F99V E154Q Q176G",5
"lib2","SARS-CoV-2","AAAGGAGACATACCTT",6,58.2,10.65,-0.18,0.02,2.9,1.09,0,">1 nonsynonymous","I104V K114S",2
"lib2","SARS-CoV-2","AAAGGAGAGTTCGAGT",7,103.74,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D112G R136C I142D",3
"lib2","SARS-CoV-2","AAAGGAGATTGGTCAC",10,360.42,6,-4.84,2,1.5,1.22,0,">1 nonsynonymous","R27L F62I D90Y K114S F167S Q176S",6
"lib2","SARS-CoV-2","AAAGGAGATTTTACAG",3,98.79,10.25,-0.59,0.03,2.9,1.02,0,">1 nonsynonymous","S45M C61T",2
"lib2","SARS-CoV-2","AAAGGAGCATATATAT",1,43.89,10.73,-0.1,0.04,2.99,1.04,0,"1 nonsynonymous","G196L",1
"lib2","SARS-CoV-2","AAAGGAGCTATTGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10S G51*",2
"lib2","SARS-CoV-2","AAAGGAGGGAAAATTA",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L L95T G116L T148M",4
"lib2","SARS-CoV-2","AAAGGAGGGCAGAACA",3,29.85,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K56P I88L S129D L183F V194I",5
"lib2","SARS-CoV-2","AAAGGAGGGTATACAT",2,23.2,7.61,-3.22,0.38,1.5,1.16,0.05,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","AAAGGAGTCTGTTAGA",7,7.15,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A22S D68E P96C V103E G116V I142L G172Q",7
"lib2","SARS-CoV-2","AAAGGAGTGTAATCTC",9,21.48,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","W23R S53M D98R L122D C158Y S200Y",6
"lib2","SARS-CoV-2","AAAGGATATGGCAGAA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","F17T L38A F44L Y66* A89S G101H",6
"lib2","SARS-CoV-2","AAAGGATCCAACAAAC",1,11.28,7.92,-2.91,0.32,1.87,1.21,0.04,">1 nonsynonymous","D90T G116I T170M",3
"lib2","SARS-CoV-2","AAAGGATCGAATGCAC",1,73.62,10.42,-0.42,0.05,2.95,1.04,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","AAAGGATCTATAAGCC",6,17.22,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y50N E141S G146T",3
"lib2","SARS-CoV-2","AAAGGATGATAAGTTA",11,95.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G51C V103G",2
"lib2","SARS-CoV-2","AAAGGATTCAATACGT",1,14.04,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I104C N120F F156P R179E",4
"lib2","SARS-CoV-2","AAAGGATTCACAATCG",10,153.37,8.6,-2.23,0.1,2.56,1.05,0,">1 nonsynonymous","S19P A81V Y119P",3
"lib2","SARS-CoV-2","AAAGGATTTTTGGAGG",2,28.58,9.84,-1,0.1,2.57,1.14,0.01,">1 nonsynonymous","G83R N107Q",2
"lib2","SARS-CoV-2","AAAGGCAAAATTTCCC",1,22.06,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","K26W F47S K87S W106R Q168P",5
"lib2","SARS-CoV-2","AAAGGCAACATGACCG",3,15.61,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C49M D68R K132M",3
"lib2","SARS-CoV-2","AAAGGCAACCCGAACT",4,63.85,10.85,0.01,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGGCAAGTAAGGGC",6,21.13,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K56V D90T V103S K132W",4
"lib2","SARS-CoV-2","AAAGGCAATTGTCCAT",9,184.89,10.72,-0.12,0.04,2.93,1.08,0,">1 nonsynonymous","N40S N64S V153S",3
"lib2","SARS-CoV-2","AAAGGCAATTTTTAGT",11,95.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23Q F44L K56I I104S Y178L",5
"lib2","SARS-CoV-2","AAAGGCACTAGATTTT",1,43.09,10.59,-0.25,0.07,2.91,1.08,0,">1 nonsynonymous","S29L K198R",2
"lib2","SARS-CoV-2","AAAGGCACTATTTATA",1,16.41,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y39C R73V W106G T201C",4
"lib2","SARS-CoV-2","AAAGGCAGTCTAAATA",2,62.82,10.85,0.02,0.08,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGGCATACTAAGGG",3,62.57,10.56,-0.28,0.03,2.95,1.06,0,"1 nonsynonymous","G155M",1
"lib2","SARS-CoV-2","AAAGGCATATGGGAAA",11,72.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6S W106A F134K",3
"lib2","SARS-CoV-2","AAAGGCATGCCCACAA",3,51.42,10.58,-0.25,0.06,3,1.02,0,">1 nonsynonymous","V11I S36V S45N N130S T201M",5
"lib2","SARS-CoV-2","AAAGGCATTGAAAAGA",1,32.55,10.92,0.08,0.05,2.9,1.1,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","AAAGGCATTGGCCGAA",6,71.06,6,-4.84,1.31,1.5,1.2,0.02,">1 nonsynonymous","W23C V32T S41G K56G S147G",5
"lib2","SARS-CoV-2","AAAGGCATTTCGCGAA",3,85.4,7.43,-3.41,0.15,1.59,1.07,0,">1 nonsynonymous","S113V Q176H",2
"lib2","SARS-CoV-2","AAAGGCCACACTCGTA",1,17.83,10.65,-0.19,0.07,2.95,1.05,0,">1 nonsynonymous","C61L D90N S129V",3
"lib2","SARS-CoV-2","AAAGGCCAGAGGTGAA",4,40.58,9.79,-1.05,0.05,2.83,1.06,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","AAAGGCCCACAGGAAA",2,20.92,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T85L A105C S113W Y119M S200V",5
"lib2","SARS-CoV-2","AAAGGCCCTAATCACA",6,134.32,8.94,-1.9,0.07,2.65,1.1,0,">1 nonsynonymous","L38I D90K P169D",3
"lib2","SARS-CoV-2","AAAGGCCTCATTCACG",12,454.04,8.47,-2.37,0.09,2.64,1.04,0,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","AAAGGCCTGCTACTTT",2,7.68,10.26,-0.57,0.15,2.93,1.09,0.01,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AAAGGCCTGGGATTCC",2,59.57,10.45,-0.39,0.06,2.9,1.04,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","AAAGGCCTGTCGAGAA",1,21.22,6.38,-4.46,0.83,1.5,1.11,0.05,">1 nonsynonymous","I2C N107W Y119R N157T",4
"lib2","SARS-CoV-2","AAAGGCGAGAATTAAC",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A N30T D98G N151Y",4
"lib2","SARS-CoV-2","AAAGGCGATAATATTT",5,23.03,6.11,-4.73,1.19,1.5,1.07,0.04,">1 nonsynonymous","C6R S29K S41V D68K Q144E P197S",6
"lib2","SARS-CoV-2","AAAGGCGGAAAAATGA",6,102.74,8.17,-2.67,0.11,2.48,1.06,0,">1 nonsynonymous","D34R F126R",2
"lib2","SARS-CoV-2","AAAGGCTAGTATATCC",2,39.77,6,-4.84,2,1.5,1.14,0.02,"1 nonsynonymous","C158F",1
"lib2","SARS-CoV-2","AAAGGCTAGTCTGCCA",12,30.59,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","C49Q D97V V103M",3
"lib2","SARS-CoV-2","AAAGGCTCTATCGATG",2,59.83,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N107V Q176E",2
"lib2","SARS-CoV-2","AAAGGCTGCAAGGAAT",5,69.18,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C61H G86D N92S V103E G146K Y178I",6
"lib2","SARS-CoV-2","AAAGGCTTACAACTAT",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S P96L",2
"lib2","SARS-CoV-2","AAAGGGAAACCCACTA",7,64.93,9.76,-1.08,0.09,1.86,1.1,0,">1 nonsynonymous","P133T E141L",2
"lib2","SARS-CoV-2","AAAGGGAACTAAAATC",7,105.42,10,-0.84,0.1,2.44,1,0,">1 nonsynonymous","F62S R136V",2
"lib2","SARS-CoV-2","AAAGGGACGTATATGC",3,20.04,9.86,-0.97,0.31,1.64,1,0.05,">1 nonsynonymous","L57A W106V",2
"lib2","SARS-CoV-2","AAAGGGACGTGAGATC",9,55.18,6.06,-4.78,0.75,1.5,1.12,0.02,">1 nonsynonymous","P82S Y143L",2
"lib2","SARS-CoV-2","AAAGGGAGACACAGTA",13,140.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V G51D D75E D97V S139T",5
"lib2","SARS-CoV-2","AAAGGGCCCAACAGAA",17,7.95,NA,NA,NA,NA,NA,NA,"stop","F12W L38* L60R",3
"lib2","SARS-CoV-2","AAAGGGCCCATTATAA",3,49.08,10.24,-0.6,0.06,2.74,1.07,0,">1 nonsynonymous","C49W V173L L187P",3
"lib2","SARS-CoV-2","AAAGGGCCCGTAGTCT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","AAAGGGCGAAGCTTGT",2,18.44,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","L60A P149T L162A",3
"lib2","SARS-CoV-2","AAAGGGCTACCATTAA",8,161.9,7.92,-2.91,0.18,1.5,1.11,0.01,">1 nonsynonymous","A14F C61W Y178M",3
"lib2","SARS-CoV-2","AAAGGGCTTAAGGATG",12,127.71,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A14L Y66P",2
"lib2","SARS-CoV-2","AAAGGGGAACAATACG",9,24.53,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A89L V182L",2
"lib2","SARS-CoV-2","AAAGGGGAATTAAGTG",5,20.27,6,-4.84,1.92,1.5,1.27,0.03,">1 nonsynonymous","F44L Y50S Y178V",3
"lib2","SARS-CoV-2","AAAGGGGACAAACGTG",9,83.86,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G83E Y93I L122M E135S",4
"lib2","SARS-CoV-2","AAAGGGGCATACACTT",5,29.77,7.64,-3.2,0.22,1.5,1.05,0.02,">1 nonsynonymous","K94P Y119F P197S",3
"lib2","SARS-CoV-2","AAAGGGGCATTATGTT",6,43.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19T I88N I138Y P149Q",4
"lib2","SARS-CoV-2","AAAGGGGCCTCAAAGT",16,266.13,7.81,-3.03,0.15,1.5,1.07,0.01,">1 nonsynonymous","T100W Y119T T148Y P161A",4
"lib2","SARS-CoV-2","AAAGGGGGGCTAAAAT",6,2.16,NA,NA,NA,NA,NA,NA,"stop","C6Y C49H K94*",3
"lib2","SARS-CoV-2","AAAGGGGGTTAAAGAA",7,95.05,9.61,-1.22,0.1,2.41,1.06,0,">1 nonsynonymous","P133T G155S",2
"lib2","SARS-CoV-2","AAAGGGGTACTCAGGT",5,0,NA,NA,NA,NA,NA,NA,"stop","W23* P96S F160H",3
"lib2","SARS-CoV-2","AAAGGGGTCCCAGGCT",5,64.37,10.71,-0.13,0.02,2.89,1.11,0,">1 nonsynonymous","S43F L95I",2
"lib2","SARS-CoV-2","AAAGGGGTTAAGTGAA",6,152.2,10.67,-0.16,0.03,2.96,1.05,0,">1 nonsynonymous","P149L T201N",2
"lib2","SARS-CoV-2","AAAGGGTAAAGATACG",10,106.12,10.21,-0.62,0.06,2.68,1.06,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","AAAGGGTGCGTGGCGC",2,90.15,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","T15S Y50L A81R L111K P177S",5
"lib2","SARS-CoV-2","AAAGGGTGTAACATAC",4,20,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N13L L38M N64I A145L P149S N157Y",6
"lib2","SARS-CoV-2","AAAGGGTGTATTTACA",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G F126S S164L",3
"lib2","SARS-CoV-2","AAAGGGTTCACCTATT",7,124.6,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N64T T85K I138P G172T",4
"lib2","SARS-CoV-2","AAAGGGTTCAGACAAT",10,42.32,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I2W P96T Y165M",3
"lib2","SARS-CoV-2","AAAGGTAACAGTGGTT",8,175.29,9.78,-1.05,0.05,2.86,1.08,0,">1 nonsynonymous","D98A Q168T",2
"lib2","SARS-CoV-2","AAAGGTAACGCAGGAA",3,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35W L60F A89T T140L V173R",5
"lib2","SARS-CoV-2","AAAGGTAATTTAACGG",2,51.78,9.86,-0.97,0.06,2.88,1.11,0,"1 nonsynonymous","T170G",1
"lib2","SARS-CoV-2","AAAGGTACATCAATTG",5,106.8,8.73,-2.1,0.04,2.86,1.1,0,">1 nonsynonymous","N107A Y119S",2
"lib2","SARS-CoV-2","AAAGGTAGCGCGTGAT",1,3.89,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AAAGGTATAAAAACCT",5,40.13,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R27D F62G Q84F A105P S113R R124S",6
"lib2","SARS-CoV-2","AAAGGTATTAGAAACG",1,9.46,10.94,0.11,0.08,3,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAAGGTCAACTGACCG",2,18.97,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","C49V R127F S147I",3
"lib2","SARS-CoV-2","AAAGGTCACGATAAAG",6,33.15,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V37Y S43T A89P F99P R136A G152V",6
"lib2","SARS-CoV-2","AAAGGTCGCAACCTAA",1,24.5,8.34,-2.5,0.25,1.5,1.14,0.02,">1 nonsynonymous","R16I C61T V77K T201K",4
"lib2","SARS-CoV-2","AAAGGTCGCCCGTCCA",2,32.33,10.31,-0.53,0.09,2.81,1.16,0,">1 nonsynonymous","A105F L122E K132M P197I",4
"lib2","SARS-CoV-2","AAAGGTCGGTTTATCA",6,90.48,10.71,-0.13,0.04,2.89,1.05,0,">1 nonsynonymous","E141T P149L",2
"lib2","SARS-CoV-2","AAAGGTCTTCCAGTTC",4,39.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V77W C102F",2
"lib2","SARS-CoV-2","AAAGGTGAAAACTGGC",7,34.75,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N1S K26G F70I A81T N107I Y123K E135Q N171Y",8
"lib2","SARS-CoV-2","AAAGGTGACACATTAA",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y Q84L N109M V180A",4
"lib2","SARS-CoV-2","AAAGGTGCACAAAACT",2,7.37,6.5,-4.34,0.91,1.5,1.13,0.05,">1 nonsynonymous","P54R Y123D",2
"lib2","SARS-CoV-2","AAAGGTGCACAATTTG",11,133.73,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G83L A89Q L125S F134Q Y143L Q163P",6
"lib2","SARS-CoV-2","AAAGGTGTCAAACGAC",3,6.2,NA,NA,NA,NA,NA,NA,"stop","D75Q L162*",2
"lib2","SARS-CoV-2","AAAGGTGTTTAACTAT",2,7.47,9.89,-0.95,0.16,1.89,1.07,0.02,">1 nonsynonymous","I138R F167W",2
"lib2","SARS-CoV-2","AAAGGTTAACGAAACC",2,34.76,10.59,-0.24,0.06,2.9,1.08,0,"1 nonsynonymous","Y123A",1
"lib2","SARS-CoV-2","AAAGGTTATGACGGGT",5,83.17,9.99,-0.85,0.05,2.74,1.03,0,">1 nonsynonymous","A14N D90L I142L",3
"lib2","SARS-CoV-2","AAAGGTTATGCCAGAG",4,38.79,10.66,-0.18,0.05,2.96,1.04,0,">1 nonsynonymous","T55F Q84K",2
"lib2","SARS-CoV-2","AAAGGTTCCTTTCCTG",2,15.65,6,-4.84,2,3,1.23,0.01,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","AAAGGTTCGATTTCTA",16,11.39,10.69,-0.15,0.19,2.65,1,0.01,">1 nonsynonymous","S41A I138K",2
"lib2","SARS-CoV-2","AAAGGTTGACAAATCA",1,13.12,9.66,-1.18,0.13,2.92,1.08,0.01,">1 nonsynonymous","P7S G166V",2
"lib2","SARS-CoV-2","AAAGGTTGCAAGAGAT",11,166.82,10.18,-0.65,0.03,2.95,1.04,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","AAAGGTTTACCAACTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V T46V K94S",3
"lib2","SARS-CoV-2","AAAGGTTTATGTAATG",6,30.57,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D34G S43P L95W",3
"lib2","SARS-CoV-2","AAAGTAAAAATGAGAT",1,2.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","AAAGTAAAACGCTACA",2,16.09,9.74,-1.09,0.12,2.59,1.33,0.01,">1 nonsynonymous","L60M L125N",2
"lib2","SARS-CoV-2","AAAGTAAAATGTCATA",3,26.1,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S53L D97E F134Q Q176W",4
"lib2","SARS-CoV-2","AAAGTAAACGAAATCA",11,207.83,10.11,-0.73,0.05,3,1.03,0,">1 nonsynonymous","G9D N64K F126V",3
"lib2","SARS-CoV-2","AAAGTAAACTAATAAA",6,90.17,9.21,-1.63,0.09,1.84,1.04,0,">1 nonsynonymous","N4M R16L C61A R136S",4
"lib2","SARS-CoV-2","AAAGTAAAGAACTTGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S Y165A",2
"lib2","SARS-CoV-2","AAAGTAAATAAACTCA",4,171.19,10.25,-0.59,0.04,2.82,1.02,0,">1 nonsynonymous","L38C L122S",2
"lib2","SARS-CoV-2","AAAGTAAATCTACGTC",5,61.59,9.88,-0.96,0.05,2.95,1.03,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","AAAGTAAATTCTATTA",2,22.61,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G117S I142D Y178A",3
"lib2","SARS-CoV-2","AAAGTAACAAAGTTTA",5,38.96,6.82,-4.02,0.31,1.5,1.15,0.02,">1 nonsynonymous","D97T D137L",2
"lib2","SARS-CoV-2","AAAGTAACCATATGCT",11,11.45,6,-4.84,2,3,1.04,0,">1 nonsynonymous","N13S Y91F N109V R136S G146L",5
"lib2","SARS-CoV-2","AAAGTAACCCCCGGTT",2,15.72,8.42,-2.42,0.27,1.5,1,0.03,">1 nonsynonymous","S29N K56E L60Q I88Q",4
"lib2","SARS-CoV-2","AAAGTAACTACAACTG",10,79.56,10.22,-0.61,0.05,2.89,1.07,0,"1 nonsynonymous","Y35H",1
"lib2","SARS-CoV-2","AAAGTAAGCTAACACG",4,25.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L60F W106T V153S T170I",4
"lib2","SARS-CoV-2","AAAGTAAGTTAATGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I T201E",2
"lib2","SARS-CoV-2","AAAGTAATACAAGGAT",7,21.74,8.73,-2.1,0.18,2.02,1.14,0.01,">1 nonsynonymous","A42L L162H K198T",3
"lib2","SARS-CoV-2","AAAGTAATCTCTCATA",9,220.31,6,-4.84,0.82,1.5,1.13,0,">1 nonsynonymous","P7V S45L Q79K R124T S139T C158Y Y178N S184V",8
"lib2","SARS-CoV-2","AAAGTAATGTAAAACT",6,198.19,8.53,-2.3,0.06,2.32,1.06,0,">1 nonsynonymous","F99L Y159F",2
"lib2","SARS-CoV-2","AAAGTACAAGAGCTAA",8,0.96,NA,NA,NA,NA,NA,NA,"stop","L5* S69K N107T",3
"lib2","SARS-CoV-2","AAAGTACCACATTCCT",7,51.06,9.6,-1.23,0.06,2.94,1.04,0,">1 nonsynonymous","K87V Y123E",2
"lib2","SARS-CoV-2","AAAGTACCATACCTCG",1,7.02,6.2,-4.64,0.99,3,1.23,0.04,">1 nonsynonymous","S19F L60Q D98L Q163R",4
"lib2","SARS-CoV-2","AAAGTACCGTGAATCG",1,0,NA,NA,NA,NA,NA,NA,"stop","F12L V20G S41* D90E E154L",5
"lib2","SARS-CoV-2","AAAGTACCTAAAACCC",7,18.97,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I80R P161T",2
"lib2","SARS-CoV-2","AAAGTACGATATCCCT",6,2.31,NA,NA,NA,NA,NA,NA,"stop","A42H T63K Q176*",3
"lib2","SARS-CoV-2","AAAGTACGCAACAATT",4,49.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y50L D98V Q176T T201M",4
"lib2","SARS-CoV-2","AAAGTACGGAGGGATA",2,25.35,9.72,-1.12,0.12,2.26,1,0.01,">1 nonsynonymous","C6Y C61S Q84L",3
"lib2","SARS-CoV-2","AAAGTACGTACAAACA",4,99.22,10.78,-0.06,0.05,2.93,1.09,0,"1 nonsynonymous","F134Y",1
"lib2","SARS-CoV-2","AAAGTACGTTCAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","V32* N107I Q163L F185I",4
"lib2","SARS-CoV-2","AAAGTACTACAATTAA",8,96.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11A D90V N120G F167L",4
"lib2","SARS-CoV-2","AAAGTAGAAACCTAGT",7,80.94,10.83,-0.01,0.05,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGTAGAAAGTTGAC",4,40.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60R Y93Q R127K",3
"lib2","SARS-CoV-2","AAAGTAGAATAGAACG",17,33.17,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L95D T201R",2
"lib2","SARS-CoV-2","AAAGTAGATCTCATGG",3,28.13,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F70D D98A",2
"lib2","SARS-CoV-2","AAAGTAGATTCAATTC",3,30.37,9.71,-1.13,0.1,2.27,1.02,0.01,">1 nonsynonymous","L57F K94R E154M",3
"lib2","SARS-CoV-2","AAAGTAGCGGGAAAAC",1,12.72,NA,NA,NA,NA,NA,0.26,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","AAAGTAGGTGGTAAGT",8,0.05,NA,NA,NA,NA,NA,NA,"stop","I2V L122*",2
"lib2","SARS-CoV-2","AAAGTAGGTTTACTAG",17,420.33,10.21,-0.62,0.03,2.95,1.03,0,"1 nonsynonymous","C31T",1
"lib2","SARS-CoV-2","AAAGTAGTATTCGTAA",21,134.64,6.05,-4.79,0.67,1.5,1.2,0.01,">1 nonsynonymous","I2P K48A D137T",3
"lib2","SARS-CoV-2","AAAGTATAACACTGCA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","P7F V11T Y123* P149C P177L",5
"lib2","SARS-CoV-2","AAAGTATAACCAAGCA",4,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y F70R P149F N171E",4
"lib2","SARS-CoV-2","AAAGTATAATATTAAT",2,46.88,6.2,-4.63,0.54,1.5,1.22,0.01,">1 nonsynonymous","Y91S V103L F134I",3
"lib2","SARS-CoV-2","AAAGTATAGAGAATTT",2,35.36,7.92,-2.92,0.13,1.97,1.09,0,">1 nonsynonymous","D90Y N110Q Y119S L162V",4
"lib2","SARS-CoV-2","AAAGTATAGCAAAAAA",5,51.65,10.84,0.01,0.05,2.97,1.05,0,"1 nonsynonymous","T100V",1
"lib2","SARS-CoV-2","AAAGTATAGTTAATGA",7,32.05,6,-4.84,2,3,1.21,0,">1 nonsynonymous","G9K V103N",2
"lib2","SARS-CoV-2","AAAGTATCAGCCGGGT",4,73.37,10.38,-0.45,0.05,2.86,1.14,0,">1 nonsynonymous","G9V R27T T148Y",3
"lib2","SARS-CoV-2","AAAGTATCGAAGCCTA",9,145.5,10.46,-0.38,0.04,2.94,1.02,0,">1 nonsynonymous","L5I N13A",2
"lib2","SARS-CoV-2","AAAGTATCTGATAAAG",4,41.63,7.55,-3.28,0.21,1.63,1.14,0.01,">1 nonsynonymous","A14Q N157I",2
"lib2","SARS-CoV-2","AAAGTATGTTCTACTG",10,89.67,10.05,-0.78,0.11,2.59,1.01,0,">1 nonsynonymous","D34R P169R",2
"lib2","SARS-CoV-2","AAAGTATTACAGCGCC",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36M T85M N157L",3
"lib2","SARS-CoV-2","AAAGTATTACTAATGA",3,43.01,8.23,-2.6,0.14,2.23,1.04,0.01,"1 nonsynonymous","Y165C",1
"lib2","SARS-CoV-2","AAAGTATTGTTAAGGA",3,57.95,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T55H L95T N120L G172K",4
"lib2","SARS-CoV-2","AAAGTCAAAAGTAAAC",5,86.99,11,0.16,0.07,2.91,1.04,0,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","AAAGTCAAAAGTGACA",5,43.36,10.63,-0.2,0.07,2.92,1.05,0,"1 nonsynonymous","K56F",1
"lib2","SARS-CoV-2","AAAGTCAATGAACACT",7,106.45,9.26,-1.58,0.08,1.87,1.07,0,">1 nonsynonymous","I28Q C61S V115W T201P",4
"lib2","SARS-CoV-2","AAAGTCAATTGCTCTA",5,57.66,10.63,-0.21,0.05,2.97,1.02,0,">1 nonsynonymous","T3K Q84H",2
"lib2","SARS-CoV-2","AAAGTCACAACTCGTT",5,49.32,9.69,-1.15,0.09,2.19,1.03,0,">1 nonsynonymous","Q84R D90Y K128T P149Q",4
"lib2","SARS-CoV-2","AAAGTCAGAATCATAC",7,123.86,10.84,0,0.06,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGTCAGACTTAATG",3,46.05,10.78,-0.06,0.08,2.82,1.19,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","AAAGTCATAAGGACAA",1,8.27,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","P96A S129C F185R",3
"lib2","SARS-CoV-2","AAAGTCATCATCCTTA",1,6.27,NA,NA,NA,NA,NA,0.51,">1 nonsynonymous","Y93P N107F N120E V180K",4
"lib2","SARS-CoV-2","AAAGTCATGTTCTACC",3,43.84,10.08,-0.76,0.07,2.78,1.05,0,">1 nonsynonymous","V37Q Q79R",2
"lib2","SARS-CoV-2","AAAGTCATTGTCATAA",3,32.72,10.93,0.09,0.08,2.8,1.2,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGTCCAACTTAGAA",5,32.64,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A81R N109Q P149L V153N F185Y",5
"lib2","SARS-CoV-2","AAAGTCCAATACGAAA",3,48.92,10.68,-0.15,0.07,2.9,1.07,0,">1 nonsynonymous","T15R I138V",2
"lib2","SARS-CoV-2","AAAGTCCAGGTGTAAA",6,1.43,NA,NA,NA,NA,NA,NA,"stop","G9N F17G L60* G86L",4
"lib2","SARS-CoV-2","AAAGTCCCAAAGCGGT",6,138.86,9.39,-1.44,0.03,2.89,1.11,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","AAAGTCCCCGCCCTCA",1,15.97,10.84,0,0.07,3,1.01,0,">1 nonsynonymous","L5M L60S L122S",3
"lib2","SARS-CoV-2","AAAGTCCCGCTACATA",1,15.61,8.91,-1.93,0.27,1.5,1,0.03,">1 nonsynonymous","A18V F47S",2
"lib2","SARS-CoV-2","AAAGTCCCTATGCGAT",7,15.5,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","A33I K56S K87P P161R",4
"lib2","SARS-CoV-2","AAAGTCCCTCCAGATG",1,24.35,9.37,-1.46,0.08,2.61,1.25,0,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","AAAGTCCCTTAATAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y L122V",2
"lib2","SARS-CoV-2","AAAGTCCGAACCACCA",4,12.33,NA,NA,NA,NA,NA,NA,"stop","T100Q Q168*",2
"lib2","SARS-CoV-2","AAAGTCCGGCCCTTAA",3,16.53,10.56,-0.28,0.12,2.89,1.14,0.01,">1 nonsynonymous","T55N V115T K128L",3
"lib2","SARS-CoV-2","AAAGTCCGGTAATGAT",7,0.1,NA,NA,NA,NA,NA,NA,"stop","S45I V52K T140* T201L",4
"lib2","SARS-CoV-2","AAAGTCCTAAAACTGG",3,94.83,9.52,-1.32,0.11,1.82,1.07,0,">1 nonsynonymous","R16F L38F F134V",3
"lib2","SARS-CoV-2","AAAGTCCTACTTGACA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","C6E K56*",2
"lib2","SARS-CoV-2","AAAGTCCTATCTGAGT",3,65.33,10.76,-0.08,0.08,2.96,1.08,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","AAAGTCCTCTGTGCGC",6,266.6,9.29,-1.54,0.06,2.28,1.05,0,">1 nonsynonymous","S45H T100C P149S P161S",4
"lib2","SARS-CoV-2","AAAGTCCTTCCGGGTT",1,12.73,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C61M I88W G146A G174L P197V",5
"lib2","SARS-CoV-2","AAAGTCGCATTCGCGA",5,1.22,NA,NA,NA,NA,NA,NA,"stop","S41F N107* S129* T148L",4
"lib2","SARS-CoV-2","AAAGTCGGCGATTACG",6,24.44,9.51,-1.32,0.37,1.5,1,0.06,">1 nonsynonymous","V103Q T170S",2
"lib2","SARS-CoV-2","AAAGTCTCTCCATATT",4,52.23,9.9,-0.94,0.08,2.25,1.07,0,">1 nonsynonymous","A22R N40V F160T",3
"lib2","SARS-CoV-2","AAAGTCTGAATAAACG",8,132.04,9.9,-0.94,0.05,2.68,1.07,0,">1 nonsynonymous","T3W S43F F160L Q168S",4
"lib2","SARS-CoV-2","AAAGTCTGTAGACGTT",3,35.75,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","R25S G74T A81E G174L",4
"lib2","SARS-CoV-2","AAAGTCTTAACTCAAA",2,44.54,10.76,-0.07,0.1,2.93,1.04,0,">1 nonsynonymous","D97G S129T T201S",3
"lib2","SARS-CoV-2","AAAGTCTTGCCAAATC",1,3.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","AAAGTGAAACACACAA",9,120.86,10.78,-0.06,0.04,2.91,1.1,0,"1 nonsynonymous","T85K",1
"lib2","SARS-CoV-2","AAAGTGAAAGAATACG",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103P A190V",2
"lib2","SARS-CoV-2","AAAGTGAAATCCAAAT",1,21.58,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41F F167H",2
"lib2","SARS-CoV-2","AAAGTGAAGTGTCTGT",4,11.17,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","R25G I88R F99K",3
"lib2","SARS-CoV-2","AAAGTGAATATATCCA",4,26.68,7.15,-3.69,0.31,1.5,1.2,0.03,">1 nonsynonymous","V65E Y121M T201L",3
"lib2","SARS-CoV-2","AAAGTGAATTGCTGGT",13,273.6,9.46,-1.38,0.07,2.77,1.08,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","AAAGTGAATTTGGAGT",13,191.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10Q F167T",2
"lib2","SARS-CoV-2","AAAGTGACGACCAAAT",7,108.07,9.23,-1.6,0.13,1.78,1.12,0.01,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","AAAGTGAGAAGCTGTT",6,71.18,10.51,-0.32,0.06,2.82,1.11,0,">1 nonsynonymous","L60E N120S N151F",3
"lib2","SARS-CoV-2","AAAGTGAGATGGGACT",10,89.54,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","N24A G51P Y91E",3
"lib2","SARS-CoV-2","AAAGTGAGGCTATTAC",3,121.2,8.71,-2.13,0.42,1.5,1,0.07,">1 nonsynonymous","N4C G86S A105T Y121F K132Y I142D",6
"lib2","SARS-CoV-2","AAAGTGAGTGATCTGT",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T P96R",2
"lib2","SARS-CoV-2","AAAGTGATAATGTCAG",5,75.3,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23K V32S V77M",3
"lib2","SARS-CoV-2","AAAGTGATATAAATCT",5,81.08,10.82,-0.02,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGTGATGAACACTA",7,16.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L C49M V77K G101S",4
"lib2","SARS-CoV-2","AAAGTGATGGGAGGAA",3,37.88,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F99Y V153C Y178I",3
"lib2","SARS-CoV-2","AAAGTGCCTTTGTAAA",3,27.7,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6F I28T C49I",3
"lib2","SARS-CoV-2","AAAGTGCCTTTTTCAC",3,39.18,7.92,-2.92,0.15,1.93,1.04,0.01,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","AAAGTGCTATCTGCCG",7,49.53,9.58,-1.25,0.07,2.2,1.08,0,">1 nonsynonymous","A14M N151K S164L T201N",4
"lib2","SARS-CoV-2","AAAGTGCTGCAAAGGT",13,93.39,6.1,-4.74,0.66,1.5,1.13,0.01,">1 nonsynonymous","R25F F44G T100N I104V T140I",5
"lib2","SARS-CoV-2","AAAGTGGAACCCGCTG",4,24.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R73G D97R F99S L122E T140L S200N",6
"lib2","SARS-CoV-2","AAAGTGGATATTTCTA",6,168.55,6.33,-4.51,0.19,1.5,1.1,0,">1 nonsynonymous","Y39S C150V",2
"lib2","SARS-CoV-2","AAAGTGGATTCCAGCA",17,92.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y119L D137H",2
"lib2","SARS-CoV-2","AAAGTGGCATAGGAAC",14,288.48,9.12,-1.72,0.03,2.65,1.13,0,"1 nonsynonymous","G166R",1
"lib2","SARS-CoV-2","AAAGTGGCTAAAAACT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","N13H Y39* G116P S147M Q163K",5
"lib2","SARS-CoV-2","AAAGTGGGTCGTTTGC",5,17.37,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13S L122P L162Q",3
"lib2","SARS-CoV-2","AAAGTGGTCCAACGAA",4,20.9,10.49,-0.34,0.08,2.84,1.14,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","AAAGTGGTTCAACGTT",6,2.82,NA,NA,NA,NA,NA,NA,"stop","N58* P149G N151K",3
"lib2","SARS-CoV-2","AAAGTGTAAAGAGTAA",11,1.32,NA,NA,NA,NA,NA,NA,"stop","S43C A89* K198S",3
"lib2","SARS-CoV-2","AAAGTGTAAGAGTCCT",2,32.74,10.83,0,0.11,2.73,1.04,0.01,">1 nonsynonymous","K132T T201Y",2
"lib2","SARS-CoV-2","AAAGTGTCAAACCAAT",5,111.41,6.8,-4.04,0.29,1.5,1.14,0.01,">1 nonsynonymous","T55M R136I Q176S",3
"lib2","SARS-CoV-2","AAAGTGTGCCTCGGAT",6,210.99,10.84,0.01,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAAGTGTGGACCAATC",2,96.95,8.39,-2.44,0.11,2.47,1.13,0,">1 nonsynonymous","N1C G83V Y119D P197K",4
"lib2","SARS-CoV-2","AAAGTGTTACCTATCA",2,28.2,10.63,-0.2,0.06,2.94,1.07,0,"1 nonsynonymous","N1F",1
"lib2","SARS-CoV-2","AAAGTGTTCAAGTTCA",4,83.37,10.84,0.01,0.05,2.9,1.11,0,">1 nonsynonymous","K56E N120R",2
"lib2","SARS-CoV-2","AAAGTGTTCCCGAAGT",1,24.02,8.68,-2.16,0.14,2.32,1,0.01,">1 nonsynonymous","S19Q Y119M",2
"lib2","SARS-CoV-2","AAAGTGTTGCGAAACT",5,71.57,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","V77R A89N",2
"lib2","SARS-CoV-2","AAAGTTAAAAAATGGC",5,8.12,9.18,-1.66,0.38,1.5,1,0.07,">1 nonsynonymous","N4R L162R E186F",3
"lib2","SARS-CoV-2","AAAGTTAAAACCTGCG",3,17.91,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","G9C S45V V77M G83V N107K",5
"lib2","SARS-CoV-2","AAAGTTAACCAAGACT",2,24.18,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6W Y143I G152C Y159F",4
"lib2","SARS-CoV-2","AAAGTTAACGTACAAT",14,173.05,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D68Y F126R",2
"lib2","SARS-CoV-2","AAAGTTAACTCGTACT",1,5.61,10.89,0.05,0.23,2.75,1.13,0.01,">1 nonsynonymous","D90L N120H T201H",3
"lib2","SARS-CoV-2","AAAGTTAAGAAAAGCC",9,255.25,10.78,-0.06,0.03,2.93,1.07,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AAAGTTAAGAACTGTT",7,60.69,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V52T L60R G101I I104H",4
"lib2","SARS-CoV-2","AAAGTTAAGAATGAAA",2,12.05,8.39,-2.45,0.37,1.99,1.2,0.03,">1 nonsynonymous","T3G K48E C61R Y121T",4
"lib2","SARS-CoV-2","AAAGTTAAGACGAACA",12,1.24,NA,NA,NA,NA,NA,NA,"stop","N4* L95R G117K I142V",4
"lib2","SARS-CoV-2","AAAGTTACACATAAAA",8,57.15,10.77,-0.07,0.05,2.91,1.1,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","AAAGTTACTTCTTCGG",1,54.7,8.65,-2.18,0.09,2.59,1.05,0,">1 nonsynonymous","N4R L60I R73G",3
"lib2","SARS-CoV-2","AAAGTTAGACAATAAA",3,27.74,10.7,-0.14,0.05,2.93,1.1,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","AAAGTTAGCAGGACTT",7,45.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15F F62V Y91Q I142M",4
"lib2","SARS-CoV-2","AAAGTTAGTCCTTTTG",1,11.26,6,-4.84,2,1.55,1.13,0.02,">1 nonsynonymous","N58R D97V G117L G155V",4
"lib2","SARS-CoV-2","AAAGTTATAACAAAAT",2,25.45,8.98,-1.86,0.17,1.55,1.18,0.02,"1 nonsynonymous","V103C",1
"lib2","SARS-CoV-2","AAAGTTATACTTGTTT",5,63.58,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Y35D K87P Y93C S129C",4
"lib2","SARS-CoV-2","AAAGTTATCAAATTAA",2,27.72,9.24,-1.6,0.07,2.93,1.06,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","AAAGTTATGGATAATT",8,120.28,10.9,0.07,0.04,2.92,1.1,0,"1 nonsynonymous","P197A",1
"lib2","SARS-CoV-2","AAAGTTATTAATCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91M R124S E141I",3
"lib2","SARS-CoV-2","AAAGTTATTTGATCAG",3,60.81,10.73,-0.11,0.04,2.95,1.07,0,">1 nonsynonymous","N13D Y35L",2
"lib2","SARS-CoV-2","AAAGTTCAAAATTTTC",1,15.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N64R N120D C150F",3
"lib2","SARS-CoV-2","AAAGTTCAAATCAAAT",3,7.44,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","L60D D90G G152F",3
"lib2","SARS-CoV-2","AAAGTTCAAGGGCTAA",4,95.36,10.68,-0.16,0.03,2.97,1.05,0,"1 nonsynonymous","R27D",1
"lib2","SARS-CoV-2","AAAGTTCATCTTCATA",3,14.71,6.1,-4.74,1.79,3,1.18,0.01,">1 nonsynonymous","N40Y A67T V103S K128A",4
"lib2","SARS-CoV-2","AAAGTTCATGTGTTAC",2,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70M T85K K114V V182G",4
"lib2","SARS-CoV-2","AAAGTTCCAACGAGAT",1,31.63,10.34,-0.49,0.07,2.84,1.09,0,"1 nonsynonymous","A14C",1
"lib2","SARS-CoV-2","AAAGTTCCAGAGCGTA",11,92.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G83N I88A F167A",3
"lib2","SARS-CoV-2","AAAGTTCCAGCTACAA",3,40.95,10.8,-0.04,0.07,2.86,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGTTCCTCTCACTG",3,28.26,9.29,-1.55,0.19,1.97,1,0.02,"1 nonsynonymous","V71S",1
"lib2","SARS-CoV-2","AAAGTTCGACACACGG",3,24.66,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y66V A105R",2
"lib2","SARS-CoV-2","AAAGTTCTAATCTGCA",13,105.64,6.35,-4.48,0.6,1.5,1.19,0.02,">1 nonsynonymous","A105E K198L",2
"lib2","SARS-CoV-2","AAAGTTCTAATTAAGG",4,4.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E76I",1
"lib2","SARS-CoV-2","AAAGTTCTAATTTAAT",3,41.71,10.65,-0.19,0.07,2.78,1.18,0,">1 nonsynonymous","S139R A190N",2
"lib2","SARS-CoV-2","AAAGTTCTCACGTCAT",5,27.33,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y91R V115M D137S L162R",4
"lib2","SARS-CoV-2","AAAGTTCTCCAAATGT",17,58.61,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S41L F99Q R127D",3
"lib2","SARS-CoV-2","AAAGTTGACCTAGCCA",1,5.41,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N40K D98W P161H",3
"lib2","SARS-CoV-2","AAAGTTGCAGTAGTAA",1,62.08,10.33,-0.5,0.05,2.99,1.03,0,">1 nonsynonymous","A81G K87N",2
"lib2","SARS-CoV-2","AAAGTTGCCACTCGAA",1,28.96,10.58,-0.26,0.08,2.94,1,0,">1 nonsynonymous","T46H D90H",2
"lib2","SARS-CoV-2","AAAGTTGCCCCCCCTG",2,10.47,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","N92Q S113R C158Y",3
"lib2","SARS-CoV-2","AAAGTTGCGAAAGTAA",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N C61R",2
"lib2","SARS-CoV-2","AAAGTTGCTTTACTAC",1,32.84,10.21,-0.63,0.1,2.91,1.03,0.01,">1 nonsynonymous","Y35C S41L",2
"lib2","SARS-CoV-2","AAAGTTGTAGATAAAC",7,0.83,NA,NA,NA,NA,NA,NA,"stop","C49S K87S R136K S184*",4
"lib2","SARS-CoV-2","AAAGTTGTAGTGGAGT",3,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A F99R L131I",3
"lib2","SARS-CoV-2","AAAGTTGTGACTAAAT",13,152.56,6,-4.84,1.15,1.5,1.2,0.01,">1 nonsynonymous","Y35G F44S D90N G117Y",4
"lib2","SARS-CoV-2","AAAGTTGTGGATTGCC",19,4.91,NA,NA,NA,NA,NA,NA,"stop","L5S N40F F70* E141M",4
"lib2","SARS-CoV-2","AAAGTTGTTCCAGTCA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L T46S Y91T F99E I104T F156S P161A G166V",8
"lib2","SARS-CoV-2","AAAGTTTAGGGTAGAT",10,7.23,NA,NA,NA,NA,NA,NA,"stop","E141W S147Y E154*",3
"lib2","SARS-CoV-2","AAAGTTTATCTAGATG",3,49.54,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I80K P133G",2
"lib2","SARS-CoV-2","AAAGTTTCATGCCATA",4,16.02,8.05,-2.79,0.4,1.5,1.01,0.06,">1 nonsynonymous","A14S Q84K I88K",3
"lib2","SARS-CoV-2","AAAGTTTGTCTACGCA",9,130.64,9.74,-1.09,0.07,2.22,1.05,0,">1 nonsynonymous","V11S V37D",2
"lib2","SARS-CoV-2","AAAGTTTGTTTCACAT",6,3.13,NA,NA,NA,NA,NA,NA,"stop","N13Y S41C I72L G117V P149*",5
"lib2","SARS-CoV-2","AAAGTTTTAATTTGTA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","L5D D34* G116P",3
"lib2","SARS-CoV-2","AAAGTTTTCTCACTAA",2,43.29,10.94,0.11,0.06,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAAGTTTTGCTTAGAC",6,160.99,9.95,-0.88,0.04,2.52,1.02,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","AAAGTTTTTAATACAA",6,32.58,10.87,0.03,0.03,2.98,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATAAAAAACAAAAG",8,129.8,10.01,-0.83,0.08,2.45,1.05,0,">1 nonsynonymous","I2N A105F",2
"lib2","SARS-CoV-2","AAATAAAAACAATCAA",4,18.12,9.22,-1.62,0.36,1.5,1.06,0.03,">1 nonsynonymous","A33N F167L Q176K",3
"lib2","SARS-CoV-2","AAATAAAAACAGCAGT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G Y91L V103K",3
"lib2","SARS-CoV-2","AAATAAAAACCGGGCG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Y93* T100G D112L P161S",4
"lib2","SARS-CoV-2","AAATAAAAACGCATAT",6,79.63,10.77,-0.06,0.02,2.91,1.07,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","AAATAAAAACGCCAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","V32R C61Y D68I K128C G146* N151I N157I",7
"lib2","SARS-CoV-2","AAATAAAAACTGAAAC",4,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S T46N D75E W106G G117H N130I",6
"lib2","SARS-CoV-2","AAATAAAAATCATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D112* L131Y C158F",3
"lib2","SARS-CoV-2","AAATAAAAATGATCAG",11,179.01,10.4,-0.44,0.03,2.89,1.07,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","AAATAAAAATTCACAC",3,109.35,10.51,-0.33,0.05,2.97,1.03,0,"1 nonsynonymous","V65T",1
"lib2","SARS-CoV-2","AAATAAAACACGGTCA",4,97.58,10.73,-0.11,0.04,2.93,1.07,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","AAATAAAACCTACGCG",8,18.4,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y91V L183R",2
"lib2","SARS-CoV-2","AAATAAAACTGACATT",2,17.24,9.63,-1.2,0.27,1.74,1.03,0.05,">1 nonsynonymous","K48W Y91M",2
"lib2","SARS-CoV-2","AAATAAAAGAAAGAAG",17,162.25,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38I Y159S A190F",3
"lib2","SARS-CoV-2","AAATAAAAGCATCCAG",6,66.89,10.66,-0.17,0.03,2.95,1.07,0,"1 nonsynonymous","V173C",1
"lib2","SARS-CoV-2","AAATAAAAGCTACGAC",1,12.02,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V11S F62M K94G R127P",4
"lib2","SARS-CoV-2","AAATAAAAGTGTGAAA",6,15.34,NA,NA,NA,NA,NA,NA,"stop","S41Q G74D N118*",3
"lib2","SARS-CoV-2","AAATAAAAGTTTGATT",12,130.23,9.43,-1.4,0.11,1.71,1.08,0,">1 nonsynonymous","N40M I72T P149E",3
"lib2","SARS-CoV-2","AAATAAAATAAATTTA",3,13.68,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","L60V K87G Y143C Q176L",4
"lib2","SARS-CoV-2","AAATAAAATCCCCCTA",11,93.9,6,-4.84,1.32,1.5,1.14,0.01,">1 nonsynonymous","R16L V32E T46G A81T L95Y V103H",6
"lib2","SARS-CoV-2","AAATAAAATCGGGAGC",3,107.16,9.8,-1.04,0.06,2.06,1.04,0,">1 nonsynonymous","Y35M Y50R K198G",3
"lib2","SARS-CoV-2","AAATAAAATCTGATAA",2,35.24,9.93,-0.9,0.09,1.88,1.05,0,">1 nonsynonymous","N40A Y91G",2
"lib2","SARS-CoV-2","AAATAAAATGAAGGAT",13,43.23,6.88,-3.96,0.35,1.5,1.22,0.02,">1 nonsynonymous","A42D T55C D137Y",3
"lib2","SARS-CoV-2","AAATAAAATTTCCGGG",11,41.17,7.86,-2.98,0.35,1.5,1.11,0.06,"1 nonsynonymous","C102E",1
"lib2","SARS-CoV-2","AAATAAACAGAGAAAT",6,11.94,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9M A89R T100G T148A",4
"lib2","SARS-CoV-2","AAATAAACAGTAAACA",5,168.81,9.78,-1.06,0.05,2.18,1.05,0,"1 nonsynonymous","I28N",1
"lib2","SARS-CoV-2","AAATAAACGAAGTACG",4,15.98,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L95C T100P N130Y",3
"lib2","SARS-CoV-2","AAATAAACGGTTAACA",7,1.91,NA,NA,NA,NA,NA,NA,"stop","N13F W23* T63V S69L D90P Y165A",6
"lib2","SARS-CoV-2","AAATAAACGTACAATT",7,42.5,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6N L95P G152N",3
"lib2","SARS-CoV-2","AAATAAACTCGTCTCT",1,18.32,10.7,-0.14,0.08,2.92,1.07,0,"1 nonsynonymous","L5C",1
"lib2","SARS-CoV-2","AAATAAACTCTCACCA",5,23.59,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38Y L95Y S113F E141W F160I",5
"lib2","SARS-CoV-2","AAATAAACTGTGGATG",11,72.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F47T C150K",2
"lib2","SARS-CoV-2","AAATAAAGAAAAGCCA",2,25.05,10.3,-0.54,0.08,2.91,1.04,0,">1 nonsynonymous","R16D D34V",2
"lib2","SARS-CoV-2","AAATAAAGAAACCCAG",4,57.45,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N4A C61K Y93K",3
"lib2","SARS-CoV-2","AAATAAAGAAGAGAAT",1,16.6,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37S D112S F156A Q168M",4
"lib2","SARS-CoV-2","AAATAAAGACACGACA",1,5.4,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","P54A D98C A105L L183N",4
"lib2","SARS-CoV-2","AAATAAAGCAGAATAC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","F62H N120S E141*",3
"lib2","SARS-CoV-2","AAATAAAGGCTAGACG",3,19.71,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F17L N40F D98I E154Q Q163P",5
"lib2","SARS-CoV-2","AAATAAATAAGTTATT",18,414.09,9.91,-0.92,0.04,2.73,1.04,0,">1 nonsynonymous","C6P T55N",2
"lib2","SARS-CoV-2","AAATAAATACAACGAA",6,109.37,10.83,-0.01,0.06,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATAAATATTCCTCG",18,1.46,NA,NA,NA,NA,NA,NA,"stop","C31F P96H D97* S129D Y175V Y178*",6
"lib2","SARS-CoV-2","AAATAAATCAAAATTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Q P177G",2
"lib2","SARS-CoV-2","AAATAAATCAGACAAG",1,15.07,10.4,-0.44,0.23,2.79,1.04,0.02,">1 nonsynonymous","Y39A I138G",2
"lib2","SARS-CoV-2","AAATAAATCATAATAG",2,26.59,9.22,-1.62,0.12,1.69,1.02,0.01,">1 nonsynonymous","C31L K48S A81S",3
"lib2","SARS-CoV-2","AAATAAATCCAAGAAA",2,5.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106P",1
"lib2","SARS-CoV-2","AAATAAATCCTAATTG",5,70.74,9.9,-0.94,0.09,2.21,1,0,">1 nonsynonymous","F44S D98V",2
"lib2","SARS-CoV-2","AAATAAATGAAAACAT",4,77.14,10.9,0.06,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAAATGCAAAAAA",4,46.26,8.2,-2.64,0.13,2.17,1.08,0.01,">1 nonsynonymous","S113N E141L",2
"lib2","SARS-CoV-2","AAATAAATGTTTATCG",17,96.67,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N58P N64F G101D",3
"lib2","SARS-CoV-2","AAATAAATTACTATTT",3,37.85,9.42,-1.42,0.11,2.03,1.05,0,">1 nonsynonymous","C6I D97N Q144R",3
"lib2","SARS-CoV-2","AAATAAATTTATGGCA",13,71.67,10.51,-0.33,0.04,2.88,1.1,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","AAATAACAAAGAACAT",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A R27I A81C L95D L122V S184D",6
"lib2","SARS-CoV-2","AAATAACAAAGATAAT",6,30.69,6.11,-4.73,0.78,1.5,1.18,0.02,">1 nonsynonymous","E154I L162E",2
"lib2","SARS-CoV-2","AAATAACAAAGGACGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S W106C S184L",3
"lib2","SARS-CoV-2","AAATAACAAGAATGTT",1,44.35,9.84,-0.99,0.07,2.27,1.07,0,"1 nonsynonymous","L38T",1
"lib2","SARS-CoV-2","AAATAACAAGCATTTC",5,66.69,7.94,-2.89,0.3,1.5,1.02,0.03,">1 nonsynonymous","L5Q L57G S129T N157L",4
"lib2","SARS-CoV-2","AAATAACAAGGGTAAA",3,8.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12N D59T E186F",3
"lib2","SARS-CoV-2","AAATAACACTGTTAAG",4,64.53,10.05,-0.78,0.08,2.74,1.06,0,">1 nonsynonymous","S45R T100N",2
"lib2","SARS-CoV-2","AAATAACAGAATGATT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* S36E L60S Y159F",4
"lib2","SARS-CoV-2","AAATAACAGGCGATGT",14,65.06,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","I88W G174H",2
"lib2","SARS-CoV-2","AAATAACATAGAAGTG",2,33.6,10.79,-0.05,0.03,3,1.01,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","AAATAACATATAATAT",2,53.26,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A22S S45D Y119M F167G",4
"lib2","SARS-CoV-2","AAATAACATCAGGAAA",19,1.81,NA,NA,NA,NA,NA,NA,"stop","Y35* Y50A",2
"lib2","SARS-CoV-2","AAATAACCAAAGTATG",3,22.76,8.94,-1.9,0.18,1.69,1.15,0.01,">1 nonsynonymous","A14H Y39F D98E N130F T148W",5
"lib2","SARS-CoV-2","AAATAACCAACCCATC",1,46.37,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","AAATAACCAACCGTTG",4,102.32,9.83,-1.01,0.11,1.97,1.02,0,">1 nonsynonymous","G9S V173T",2
"lib2","SARS-CoV-2","AAATAACCACTACTCT",17,89.53,6,-4.84,0.55,1.5,1.13,0,">1 nonsynonymous","L95R P169M",2
"lib2","SARS-CoV-2","AAATAACCAGCCGTTA",2,133.93,10.79,-0.04,0.03,2.94,1.05,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","AAATAACCAGCGGAAA",4,34.9,9.54,-1.3,0.08,2.83,1.14,0,"1 nonsynonymous","Q168V",1
"lib2","SARS-CoV-2","AAATAACCCAGAGTTA",4,85.54,10.3,-0.54,0.07,2.8,1,0,">1 nonsynonymous","P7Q S43V D90F",3
"lib2","SARS-CoV-2","AAATAACCCGATAATT",6,26.85,6.48,-4.36,0.64,1.5,1.11,0.06,">1 nonsynonymous","R25F Y123W A145E T148F",4
"lib2","SARS-CoV-2","AAATAACCGAGAACAT",15,5.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I L122P",2
"lib2","SARS-CoV-2","AAATAACCGATACAAT",10,328.24,10.33,-0.51,0.03,2.92,1.06,0,">1 nonsynonymous","T3S P169Y",2
"lib2","SARS-CoV-2","AAATAACCTCTTACAT",10,2.5,NA,NA,NA,NA,NA,NA,"stop","R78V N92F R127C V153* Q176L",5
"lib2","SARS-CoV-2","AAATAACGAAACCTAG",1,38.31,9.75,-1.08,0.09,2.19,1,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AAATAACGAATTAAAA",6,24.36,9.62,-1.22,0.08,2.19,1.08,0,">1 nonsynonymous","S41A S139I",2
"lib2","SARS-CoV-2","AAATAACGACGAATCA",5,29.81,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","K48L D68N P96C",3
"lib2","SARS-CoV-2","AAATAACGCTAACACA",2,22.29,8.5,-2.34,0.29,1.5,1.02,0.03,">1 nonsynonymous","R136T G152V",2
"lib2","SARS-CoV-2","AAATAACGGGTAATAG",3,25.06,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","E10Y Y119R Y178D L183H",4
"lib2","SARS-CoV-2","AAATAACGTGCTTGAT",4,106.84,8.53,-2.3,0.11,2.94,1.1,0.01,">1 nonsynonymous","Q168K T201V",2
"lib2","SARS-CoV-2","AAATAACGTTAACTAT",8,80.13,10.83,-0.01,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAACTAAAAAGGA",6,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T S53R T201L",3
"lib2","SARS-CoV-2","AAATAACTCAAGGATA",3,12.45,7.42,-3.42,0.39,1.58,1.15,0.06,">1 nonsynonymous","I104M P149K P177S",3
"lib2","SARS-CoV-2","AAATAACTCTATTAAC",25,437.58,10.27,-0.56,0.02,2.89,1.04,0,">1 nonsynonymous","K56C P133G",2
"lib2","SARS-CoV-2","AAATAACTGACGACTT",6,28.4,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","A105R Y143L",2
"lib2","SARS-CoV-2","AAATAACTGGAGGGGT",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77K D112K S139R G166K",4
"lib2","SARS-CoV-2","AAATAACTTAGTATTC",2,22.75,10.44,-0.39,0.06,2.91,1.07,0,"1 nonsynonymous","V65T",1
"lib2","SARS-CoV-2","AAATAACTTGACTTTT",3,12.92,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y119I E141G C158L",3
"lib2","SARS-CoV-2","AAATAACTTTGTATTG",3,11.97,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","F99K W106R Y165S",3
"lib2","SARS-CoV-2","AAATAACTTTTAAAAA",6,2.35,NA,NA,NA,NA,NA,NA,"stop","N30A N64D P96* S147* E154R",5
"lib2","SARS-CoV-2","AAATAACTTTTCCATA",5,41.36,9.05,-1.79,0.16,1.73,1.1,0.01,">1 nonsynonymous","W106L S184M",2
"lib2","SARS-CoV-2","AAATAAGAACATTATT",6,83.79,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68T R73V N118E",3
"lib2","SARS-CoV-2","AAATAAGAAGGCACTA",15,150.61,10.9,0.06,0.05,3,1.02,0,">1 nonsynonymous","K56E N109V F160Y",3
"lib2","SARS-CoV-2","AAATAAGACAACTTTG",3,8.35,7.29,-3.54,0.43,1.5,1.07,0.02,">1 nonsynonymous","L60H F99V A145V",3
"lib2","SARS-CoV-2","AAATAAGACAGATACT",14,210.84,10.07,-0.77,0.05,2.73,1.04,0,">1 nonsynonymous","E10L V37S F44I K198V",4
"lib2","SARS-CoV-2","AAATAAGACCCCTTCA",4,68.62,6.17,-4.66,0.47,1.5,1.14,0.01,">1 nonsynonymous","I2D P7L A67I N107R G155C",5
"lib2","SARS-CoV-2","AAATAAGAGTCCACTA",2,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K P82A",2
"lib2","SARS-CoV-2","AAATAAGATGTAGCTA",7,168.96,10.8,-0.04,0.04,2.94,1.08,0,">1 nonsynonymous","T55S R78A",2
"lib2","SARS-CoV-2","AAATAAGCACAATAAG",11,32.79,8.81,-2.03,0.17,1.72,1.13,0.01,">1 nonsynonymous","A22R K114L L122E R127G",4
"lib2","SARS-CoV-2","AAATAAGCCAATATGT",4,116.94,10.89,0.06,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAAGCCAGCTTAT",5,39.11,6.03,-4.8,0.74,1.5,1.15,0.01,">1 nonsynonymous","D98S A105T L162R",3
"lib2","SARS-CoV-2","AAATAAGCGAAGTAGT",3,76.82,10.8,-0.04,0.06,2.85,1.16,0,"1 nonsynonymous","S41E",1
"lib2","SARS-CoV-2","AAATAAGCTACCGCAA",1,55.17,10.77,-0.06,0.04,2.85,1.15,0,"1 nonsynonymous","G116E",1
"lib2","SARS-CoV-2","AAATAAGCTGACCCCT",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99N N151K Y178D",3
"lib2","SARS-CoV-2","AAATAAGGAGAAGATC",3,50.81,10.01,-0.82,0.1,2.59,1.03,0,">1 nonsynonymous","T100N G152I",2
"lib2","SARS-CoV-2","AAATAAGGATTGCGAA",10,41.18,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P7L A22F S41H Y50C",4
"lib2","SARS-CoV-2","AAATAAGGGACAACAA",3,13.94,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S41Y Q84W Y91F K114W N130R G172L",6
"lib2","SARS-CoV-2","AAATAAGGTCAGTTAT",2,170.95,10.76,-0.08,0.05,2.98,1.06,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AAATAAGGTTCCTAGT",4,70.04,10.06,-0.77,0.04,2.89,1.03,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","AAATAAGTATAGTTAA",8,37.95,6.49,-4.34,0.63,1.5,1.11,0.06,">1 nonsynonymous","N58H R127V",2
"lib2","SARS-CoV-2","AAATAAGTCAGTAGCC",3,25.87,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G51P Y93S S200L",3
"lib2","SARS-CoV-2","AAATAAGTCCATCTAG",4,9.33,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14W A89S N107L F156A",4
"lib2","SARS-CoV-2","AAATAAGTCCGTGTGG",1,27.28,10.63,-0.2,0.05,2.92,1.07,0,">1 nonsynonymous","K56N D59C",2
"lib2","SARS-CoV-2","AAATAAGTCTTGTTCA",4,65.4,10.81,-0.03,0.06,2.9,1.12,0,">1 nonsynonymous","N4E T201N",2
"lib2","SARS-CoV-2","AAATAAGTGAAGGTAG",5,60.78,8.84,-1.99,0.3,1.5,1,0.04,">1 nonsynonymous","T63A Y123V L162T",3
"lib2","SARS-CoV-2","AAATAAGTGCTGAATC",1,82.04,8.28,-2.55,0.14,2.63,1.01,0.01,">1 nonsynonymous","L60I G116A G146E",3
"lib2","SARS-CoV-2","AAATAAGTTAATAATA",5,58.66,10.77,-0.06,0.08,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAAGTTGTCCCGC",3,64.76,10.28,-0.55,0.05,2.99,1.02,0,">1 nonsynonymous","N4E G155D",2
"lib2","SARS-CoV-2","AAATAATAAAAACGCG",3,79.89,10.72,-0.12,0.04,2.95,1.08,0,">1 nonsynonymous","G9S R27S P149R",3
"lib2","SARS-CoV-2","AAATAATAAAATAATT",3,24.66,10.71,-0.13,0.06,2.85,1.17,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","AAATAATAAACATATA",6,53.23,10.87,0.03,0.05,2.9,1.09,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","AAATAATAAACATTAT",4,87.12,10.65,-0.18,0.03,2.93,1.06,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","AAATAATAAACATTGT",10,284.85,8.55,-2.28,0.09,2.99,1.06,0,">1 nonsynonymous","S53D N157Y",2
"lib2","SARS-CoV-2","AAATAATAAATAAAAA",10,1.83,NA,NA,NA,NA,NA,NA,"stop","C61E N107T D137*",3
"lib2","SARS-CoV-2","AAATAATAAGGCACTT",5,0.51,NA,NA,NA,NA,NA,NA,"stop","N4S V52Y P96*",3
"lib2","SARS-CoV-2","AAATAATACGTCATAG",1,22.62,8.64,-2.19,0.16,2.72,1.21,0.01,">1 nonsynonymous","S19P G174I",2
"lib2","SARS-CoV-2","AAATAATACGTCGGAT",10,65.99,7.43,-3.41,0.21,1.5,1.06,0.01,">1 nonsynonymous","D112F G116D",2
"lib2","SARS-CoV-2","AAATAATAGAATGTTT",3,23.92,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4E Y39A N110I D137V V180F",5
"lib2","SARS-CoV-2","AAATAATAGATTTCGT",5,74.1,8.32,-2.52,0.15,2.69,1.12,0.01,">1 nonsynonymous","N110K N157C",2
"lib2","SARS-CoV-2","AAATAATAGGACCATA",6,104.14,6,-4.84,2,3,1.2,0,">1 nonsynonymous","A18Y L38I W106I R124P P133E K199E",6
"lib2","SARS-CoV-2","AAATAATAGGTAAAAT",4,16.14,10.17,-0.67,0.05,2.88,1.03,0,">1 nonsynonymous","K26V P96T",2
"lib2","SARS-CoV-2","AAATAATATCATTAAA",10,101.13,8.61,-2.23,0.19,1.5,1.08,0.02,">1 nonsynonymous","Y35N A81G Q84H",3
"lib2","SARS-CoV-2","AAATAATCAAACATGA",2,97.84,9.71,-1.12,0.09,2.25,1.09,0,">1 nonsynonymous","L5G V11A S29A S36L V153Q",5
"lib2","SARS-CoV-2","AAATAATCGAAGTTGT",5,163.09,10.67,-0.17,0.03,2.97,1.04,0,">1 nonsynonymous","A14S K56Q I104Y S200N",4
"lib2","SARS-CoV-2","AAATAATCGTAAAGTT",7,23.63,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10S S41I N107V Q163D G166C",5
"lib2","SARS-CoV-2","AAATAATCGTGGATGG",1,30.51,10.1,-0.73,0.09,2.89,1.07,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","AAATAATCTTAAGCTT",2,35.42,9.25,-1.58,0.06,2.86,1.15,0,">1 nonsynonymous","S41Q Y119L",2
"lib2","SARS-CoV-2","AAATAATGACATGTAT",2,65.7,10.41,-0.42,0.07,2.86,1.09,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","AAATAATGACGTACTA",2,20.59,10.79,-0.05,0.06,2.87,1.09,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","AAATAATGATATAGAA",1,63.98,10.4,-0.43,0.04,2.92,1.02,0,">1 nonsynonymous","T15A N120S S147R",3
"lib2","SARS-CoV-2","AAATAATGATCGCGAG",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L I104H",2
"lib2","SARS-CoV-2","AAATAATGATGGATCC",1,47.44,10.87,0.03,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAATGGATATAGC",8,7.76,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13R L38E K56L V77G D112M E141M C158G",7
"lib2","SARS-CoV-2","AAATAATGTGGAGGCC",2,14.17,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y50S G74T",2
"lib2","SARS-CoV-2","AAATAATTAACGGCGG",7,1.73,NA,NA,NA,NA,NA,NA,"stop","K87* A145C G172W",3
"lib2","SARS-CoV-2","AAATAATTACAGCTAA",2,32.75,10.89,0.06,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAATTACATGAAT",2,36.6,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5N I28T N92Y R127S",4
"lib2","SARS-CoV-2","AAATAATTCACAGTTT",5,33.05,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","D68L N120D",2
"lib2","SARS-CoV-2","AAATAATTGATATCAA",9,147.02,10.46,-0.38,0.05,2.92,1.06,0,">1 nonsynonymous","N13G N40R",2
"lib2","SARS-CoV-2","AAATAATTTACCTAAA",2,64.2,10.48,-0.35,0.07,2.96,1.02,0,">1 nonsynonymous","S41P D59Y",2
"lib2","SARS-CoV-2","AAATAATTTATTAAAG",5,57.55,10.04,-0.8,0.1,2.28,1,0,">1 nonsynonymous","G9A D90M E135S",3
"lib2","SARS-CoV-2","AAATAATTTCACGCGG",1,8.76,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F70V S113T",2
"lib2","SARS-CoV-2","AAATAATTTGATATTT",13,1.82,NA,NA,NA,NA,NA,NA,"stop","N120V S139*",2
"lib2","SARS-CoV-2","AAATACAAACCTCACG",26,200.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35V K48Y C49F Y121L E141P C158N Q168R R179M",8
"lib2","SARS-CoV-2","AAATACAAATTGAAAA",5,45.52,10.13,-0.71,0.1,2.6,1.03,0,">1 nonsynonymous","T55P Q84H K132L",3
"lib2","SARS-CoV-2","AAATACAAATTTGAAT",4,22.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S36P N92Y K114F L162E K198E",5
"lib2","SARS-CoV-2","AAATACAACATGGAAT",7,3.38,NA,NA,NA,NA,NA,NA,"stop","S45Y C61* D97P Y143I",4
"lib2","SARS-CoV-2","AAATACAAGTGCTCGA",12,54.21,10.65,-0.19,0.03,2.94,1,0,">1 nonsynonymous","S41T N120L Q163L",3
"lib2","SARS-CoV-2","AAATACAAGTTCTATA",2,45.58,9.18,-1.66,0.07,2.82,1.09,0,">1 nonsynonymous","L60H Y119L",2
"lib2","SARS-CoV-2","AAATACAATCTTGATT",10,120.63,8.57,-2.26,0.09,2.53,1.08,0,">1 nonsynonymous","L57P N157D",2
"lib2","SARS-CoV-2","AAATACAATGGTCACT",5,50.08,10.13,-0.71,0.04,2.89,1,0,">1 nonsynonymous","S36G G152V",2
"lib2","SARS-CoV-2","AAATACAATGTTGCGT",18,210.01,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2A I88R G155V",3
"lib2","SARS-CoV-2","AAATACACAAACGAGT",5,56.85,9.9,-0.94,0.09,2.12,1.01,0,"1 nonsynonymous","Y50V",1
"lib2","SARS-CoV-2","AAATACACCCCAAGCA",18,125.55,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9V G51D R73F C150L Q168L",5
"lib2","SARS-CoV-2","AAATACACCTAGATGT",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D T201L",2
"lib2","SARS-CoV-2","AAATACACGAATAGCT",4,135.53,10.24,-0.59,0.02,2.87,1.01,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","AAATACACTGACTTGA",12,93.15,7.65,-3.19,0.18,1.5,1.1,0.01,">1 nonsynonymous","F8I Y91V R136H",3
"lib2","SARS-CoV-2","AAATACACTGCTCCTA",1,22.3,8.93,-1.9,0.14,2.26,1.14,0.01,">1 nonsynonymous","S43H Y165M",2
"lib2","SARS-CoV-2","AAATACAGACTATTGC",10,101.42,9.92,-0.91,0.07,2.39,1.03,0,">1 nonsynonymous","F44S Y123V",2
"lib2","SARS-CoV-2","AAATACAGCAAGGTTC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","K56* T170S",2
"lib2","SARS-CoV-2","AAATACAGTCTGAGAA",9,137.29,10.22,-0.62,0.05,2.71,1.02,0,">1 nonsynonymous","A89S S139H",2
"lib2","SARS-CoV-2","AAATACAGTTATCTCT",19,148.79,6,-4.84,1.66,1.5,1.23,0.01,">1 nonsynonymous","C49Y S108V Y121I",3
"lib2","SARS-CoV-2","AAATACAGTTATTGCA",4,53.01,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F12L L57R F99N N157F",4
"lib2","SARS-CoV-2","AAATACATAAAACTCA",2,12.01,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","C6R V153F F167V",3
"lib2","SARS-CoV-2","AAATACATCCGGTATG",7,45.2,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G9V A105M E135V C158A",4
"lib2","SARS-CoV-2","AAATACATCTATAGAA",7,104.84,6.22,-4.62,0.72,1.5,1.17,0.02,">1 nonsynonymous","Y50L K87I S108M",3
"lib2","SARS-CoV-2","AAATACATCTTCTTTG",4,3.73,NA,NA,NA,NA,NA,NA,"stop","I2L S45A L60T P177*",4
"lib2","SARS-CoV-2","AAATACATGTATATGA",3,61.29,10.59,-0.24,0.04,3,1.01,0,">1 nonsynonymous","L60K K114N",2
"lib2","SARS-CoV-2","AAATACATTATAGGGC",2,37.82,10.76,-0.08,0.1,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATACCAAACGGACT",5,0.36,NA,NA,NA,NA,NA,NA,"stop","F17* A81G L131*",3
"lib2","SARS-CoV-2","AAATACCAATATTACC",2,54.66,7.91,-2.93,0.2,1.53,1.07,0.01,">1 nonsynonymous","I104V S113D",2
"lib2","SARS-CoV-2","AAATACCACACCGACA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","W106* R136* N151I",3
"lib2","SARS-CoV-2","AAATACCACTGGCTAT",7,72.57,9.19,-1.64,0.22,1.5,1,0.01,">1 nonsynonymous","N92A N151L",2
"lib2","SARS-CoV-2","AAATACCATCAGTTGA",7,76.26,10.52,-0.31,0.03,2.91,1.06,0,"1 nonsynonymous","V71L",1
"lib2","SARS-CoV-2","AAATACCATTCCCACA",2,71.76,9.43,-1.41,0.08,2.16,1.09,0,">1 nonsynonymous","A42P A105S P133F P149L F156Y",5
"lib2","SARS-CoV-2","AAATACCCAATTACAT",2,42.41,9.39,-1.45,0.13,1.92,1.11,0.01,">1 nonsynonymous","R136S G155M K198M",3
"lib2","SARS-CoV-2","AAATACCCAGAAGAAA",9,41.92,6,-4.84,1.6,3,1.04,0,">1 nonsynonymous","F44T Y91N V103Y",3
"lib2","SARS-CoV-2","AAATACCCTTCTGCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46N I88R Y123T S139K",4
"lib2","SARS-CoV-2","AAATACCCTTTTCTCA",9,122.31,9.73,-1.1,0.09,2.38,1.05,0,">1 nonsynonymous","C6I P149F",2
"lib2","SARS-CoV-2","AAATACCGAATATCGA",1,66.14,10.28,-0.55,0.08,2.71,1.03,0,">1 nonsynonymous","T15N K128L",2
"lib2","SARS-CoV-2","AAATACCGAGCCGTAG",6,32.62,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G9C N30P L57G N92F R179S",5
"lib2","SARS-CoV-2","AAATACCGATAATTTA",5,91.7,10.82,-0.01,0.06,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATACCGGCTCTTTC",2,34.74,9.79,-1.04,0.06,3,1.06,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","AAATACCTAAGAAATA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","AAATACCTACATAAAG",12,219.83,9.07,-1.77,0.07,2.61,1.08,0,">1 nonsynonymous","T85K Q176L",2
"lib2","SARS-CoV-2","AAATACCTATATTAAC",6,88.92,8.54,-2.3,0.09,1.68,1.14,0,">1 nonsynonymous","T3V A105S S129F T170S L183V",5
"lib2","SARS-CoV-2","AAATACCTTAGTACCG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","P7V V77N D98M K114*",4
"lib2","SARS-CoV-2","AAATACCTTGTTCATT",4,62.27,10.13,-0.7,0.06,2.7,1.04,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","AAATACGAAATAATAT",7,42.22,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N40C G74K D90G P96I Y178N",5
"lib2","SARS-CoV-2","AAATACGACTAAATAA",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L C61V V103P",3
"lib2","SARS-CoV-2","AAATACGATAAGACGG",4,55.12,10.03,-0.81,0.12,2.38,1.06,0.01,">1 nonsynonymous","S36D S41P I104C",3
"lib2","SARS-CoV-2","AAATACGCCGTATTAT",2,21.47,9.39,-1.44,0.14,2.02,1.06,0.01,">1 nonsynonymous","R78L R127S F160W",3
"lib2","SARS-CoV-2","AAATACGCTAAACATG",2,24.71,10.69,-0.15,0.07,2.9,1.14,0,">1 nonsynonymous","S41W A105S L122G",3
"lib2","SARS-CoV-2","AAATACGGACGATACG",7,147.88,10.75,-0.09,0.02,2.96,1.06,0,">1 nonsynonymous","R78A A192T",2
"lib2","SARS-CoV-2","AAATACGGATTATTTT",2,69.33,10.86,0.02,0.06,2.95,1.08,0,">1 nonsynonymous","S43D N64Q A190S",3
"lib2","SARS-CoV-2","AAATACGGTTTTAACT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I V103L N120P A190S",4
"lib2","SARS-CoV-2","AAATACGTAATTGGGA",6,27.23,6.32,-4.51,0.4,2.66,1.16,0.01,">1 nonsynonymous","G74R F99K N107Y K198V",4
"lib2","SARS-CoV-2","AAATACGTTCTTTATT",5,60.29,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y121V R179E",2
"lib2","SARS-CoV-2","AAATACTAAAAATAAA",3,20.29,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y35N N64Q C102L F156K T170N",5
"lib2","SARS-CoV-2","AAATACTAAACCGGGT",1,24,10.78,-0.06,0.08,2.85,1.18,0.01,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AAATACTAAACGCACG",6,64.63,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I2K F12Y D97A V173S",4
"lib2","SARS-CoV-2","AAATACTATAATTACC",3,68.77,7.44,-3.39,0.38,1.5,1.28,0.05,">1 nonsynonymous","Y91F R124A",2
"lib2","SARS-CoV-2","AAATACTATATCGAGT",4,16.94,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y50N D98S N107I L162M V180P",5
"lib2","SARS-CoV-2","AAATACTATCGTTCGA",4,136.54,10.38,-0.45,0.03,2.86,1.08,0,">1 nonsynonymous","S36Y I104M T201E",3
"lib2","SARS-CoV-2","AAATACTATTAAACCA",16,211.5,10.26,-0.58,0.02,2.89,1.02,0,">1 nonsynonymous","T15E D90T",2
"lib2","SARS-CoV-2","AAATACTCAAGAGTTA",5,23.62,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","D68Q",1
"lib2","SARS-CoV-2","AAATACTCACATTTAT",3,8.35,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","G86V N151L",2
"lib2","SARS-CoV-2","AAATACTCACCAATTG",2,42.98,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31R G146L",2
"lib2","SARS-CoV-2","AAATACTCAGAATTTA",7,52.37,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A105P E135F H189F",3
"lib2","SARS-CoV-2","AAATACTCAGGTTCTT",12,92.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D59N A81E D98F Y165V",4
"lib2","SARS-CoV-2","AAATACTGAAGAGGAT",3,35.82,8.29,-2.54,0.12,2.19,1.05,0.01,">1 nonsynonymous","A14V Y66N Y119K",3
"lib2","SARS-CoV-2","AAATACTGCTTATCGC",3,59.61,9.31,-1.53,0.15,1.69,1.13,0.01,">1 nonsynonymous","R27K P82R K128Q",3
"lib2","SARS-CoV-2","AAATACTTAAGCGTAC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","G9A T15R G116Y N151*",4
"lib2","SARS-CoV-2","AAATACTTCAGTCGTT",6,168.95,8.66,-2.18,0.23,1.5,1.13,0.02,">1 nonsynonymous","W23A L60N T201I",3
"lib2","SARS-CoV-2","AAATACTTCCGAAAAT",2,6.66,8.61,-2.22,0.12,2.99,1.02,0,">1 nonsynonymous","I28S V103S S139F G152S",4
"lib2","SARS-CoV-2","AAATACTTTACGTATT",8,1.12,NA,NA,NA,NA,NA,NA,"stop","L60* I72D Y93G A190S",4
"lib2","SARS-CoV-2","AAATACTTTGATAACA",1,28.38,10.68,-0.15,0.07,2.89,1.11,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","AAATAGAAACTCCTCA",2,12.83,9.96,-0.88,0.06,2.95,1.04,0,"1 nonsynonymous","F156Q",1
"lib2","SARS-CoV-2","AAATAGAAAGGTGGGA",7,0.17,NA,NA,NA,NA,NA,NA,"stop","K114R Y123* G174Q V182D",4
"lib2","SARS-CoV-2","AAATAGAAATCAACCC",2,74.7,10.24,-0.6,0.06,2.81,1.04,0,">1 nonsynonymous","N30K D97N P149H P191S",4
"lib2","SARS-CoV-2","AAATAGAACCAATTGT",5,117.24,10.91,0.07,0.06,2.92,1.08,0,"1 nonsynonymous","H189T",1
"lib2","SARS-CoV-2","AAATAGAACCCAGGAT",3,11.19,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","F62R I80D V173I",3
"lib2","SARS-CoV-2","AAATAGAACGCAGACA",5,22.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61D G146V V181R",3
"lib2","SARS-CoV-2","AAATAGAACTCAAATT",6,176.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37N N120P C150S P177L",4
"lib2","SARS-CoV-2","AAATAGAAGAAGCTTT",11,76.92,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4K I28G N120H G174S V181M",5
"lib2","SARS-CoV-2","AAATAGAAGCATTAAC",2,38.55,10.12,-0.72,0.08,2.58,1,0,">1 nonsynonymous","A33V D98M T140L F160T",4
"lib2","SARS-CoV-2","AAATAGAAGCTCGGGT",4,23.91,10.08,-0.75,0.08,2.84,1,0,">1 nonsynonymous","T55K N107Q",2
"lib2","SARS-CoV-2","AAATAGACATACTCCG",7,44.69,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F8T Y91W S129Y G166V",4
"lib2","SARS-CoV-2","AAATAGACATTAGAAT",4,43.97,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P54T V71L K94D T100L L188S",5
"lib2","SARS-CoV-2","AAATAGACCAACGCTG",5,34.18,6,-4.84,2,3,1.2,0,">1 nonsynonymous","D90L N107L D112Y S147K",4
"lib2","SARS-CoV-2","AAATAGACGCATACCG",11,128.54,10.86,0.02,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAGACGCATGGTC",7,100.13,10.7,-0.13,0.05,2.85,1.1,0,">1 nonsynonymous","G116R E154R",2
"lib2","SARS-CoV-2","AAATAGACGTACCTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","AAATAGACTACATGAT",4,49.64,10.82,-0.01,0.05,2.86,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATAGAGACGCAAAT",3,16.96,8.08,-2.76,0.41,1.5,1.1,0.05,">1 nonsynonymous","A81L E154Y",2
"lib2","SARS-CoV-2","AAATAGAGTATTCCAT",3,10.56,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A18K G51A D59L P96R Q168R",5
"lib2","SARS-CoV-2","AAATAGATACATAAAC",21,232.09,8.88,-1.95,0.05,2.75,1.1,0,">1 nonsynonymous","G117S E186Y",2
"lib2","SARS-CoV-2","AAATAGATACTTAAAG",5,42.99,6.11,-4.73,1.01,1.5,1.26,0.02,"1 nonsynonymous","F99P",1
"lib2","SARS-CoV-2","AAATAGATCAAAATGA",12,165.23,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D90A Y121T F134C",3
"lib2","SARS-CoV-2","AAATAGATCCAAGTAA",4,33.45,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Y91S F99C S139G R179T",4
"lib2","SARS-CoV-2","AAATAGATCTTGTACT",3,23.66,9.5,-1.34,0.11,1.91,1.09,0.01,">1 nonsynonymous","R27K C49S E141D",3
"lib2","SARS-CoV-2","AAATAGATTACCCTAG",3,29.32,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I28Q T55K P82A",3
"lib2","SARS-CoV-2","AAATAGCAATACGAGT",2,23.31,8.88,-1.96,0.27,1.5,1,0.04,">1 nonsynonymous","N1L W106E",2
"lib2","SARS-CoV-2","AAATAGCATAGGTAGC",2,10.92,10.81,-0.03,0.08,2.84,1.13,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","AAATAGCATGGGCAGT",2,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D V103K G116A G166D",4
"lib2","SARS-CoV-2","AAATAGCCAAAGTATA",1,11.98,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T55H F99E G152A",3
"lib2","SARS-CoV-2","AAATAGCCATTCAGAA",4,124,10.5,-0.33,0.04,2.9,1.07,0,"1 nonsynonymous","Y66S",1
"lib2","SARS-CoV-2","AAATAGCCTTAAACGT",1,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A V52C P82T",3
"lib2","SARS-CoV-2","AAATAGCCTTATTTAA",8,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R S43V V77A D97R I138R",5
"lib2","SARS-CoV-2","AAATAGCGAAACAACT",7,69.89,9.78,-1.06,0.1,2.22,1.01,0,">1 nonsynonymous","P133T Q144R T201L",3
"lib2","SARS-CoV-2","AAATAGCGGCAGATGG",18,54.77,6.53,-4.3,0.6,1.5,1.27,0.04,">1 nonsynonymous","A18T D68N",2
"lib2","SARS-CoV-2","AAATAGCTATTTCTAA",8,188.82,10.35,-0.49,0.03,2.93,1.05,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","AAATAGCTCAAAAGAT",1,14.88,9.78,-1.06,0.09,2.71,1.1,0,">1 nonsynonymous","L5N Y121V",2
"lib2","SARS-CoV-2","AAATAGCTCAAAGGGA",5,103.03,10.04,-0.79,0.08,2.61,1.06,0,">1 nonsynonymous","G9H L60R V65K",3
"lib2","SARS-CoV-2","AAATAGCTCAGTCTTT",1,30.92,10.58,-0.26,0.05,2.97,1,0,">1 nonsynonymous","F44I T148I",2
"lib2","SARS-CoV-2","AAATAGCTGTTTGAGC",4,2.66,NA,NA,NA,NA,NA,NA,"stop","E10G N40M V52I C61V L95* W106D I138G G146M",8
"lib2","SARS-CoV-2","AAATAGCTTAAACACA",2,49.73,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5K G155I Q168A R179F",4
"lib2","SARS-CoV-2","AAATAGGAAAGACAGC",6,77.75,9.98,-0.85,0.07,2.21,1.09,0,">1 nonsynonymous","P96N E141Y",2
"lib2","SARS-CoV-2","AAATAGGAAAGTTGGA",2,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S K114A Y121G",3
"lib2","SARS-CoV-2","AAATAGGAGTTATTCA",7,81.23,9.59,-1.25,0.06,2.76,1.05,0,">1 nonsynonymous","N1Y E154W",2
"lib2","SARS-CoV-2","AAATAGGATTGACATC",10,58.41,6,-4.84,1.11,1.5,1.11,0.02,">1 nonsynonymous","F12N A81I",2
"lib2","SARS-CoV-2","AAATAGGCAATCCAAA",4,35.51,10.76,-0.07,0.09,2.82,1.06,0,">1 nonsynonymous","F62W T100N V194I",3
"lib2","SARS-CoV-2","AAATAGGCATAAAAAG",8,101.07,9.77,-1.06,0.07,2.21,1.07,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","AAATAGGCATTGTTAA",1,98.08,10.43,-0.41,0.05,2.87,1.07,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","AAATAGGCCACATAAT",3,37.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6S D59A N107F",3
"lib2","SARS-CoV-2","AAATAGGCTAACCTAC",2,24.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","E10L I88E S113W C158R",4
"lib2","SARS-CoV-2","AAATAGGCTAGCCAAA",2,34.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y165E A190L",2
"lib2","SARS-CoV-2","AAATAGGTATTGCCAG",4,23.99,8.96,-1.87,0.18,1.55,1.13,0.01,">1 nonsynonymous","Y50A K199S",2
"lib2","SARS-CoV-2","AAATAGGTTACTGTTT",3,59.83,10.13,-0.7,0.11,2.35,1.03,0.01,">1 nonsynonymous","L122M R136G",2
"lib2","SARS-CoV-2","AAATAGTACCAATAAG",4,16.74,7.57,-3.27,0.17,1.89,1.11,0.01,">1 nonsynonymous","N24H C31K G74R",3
"lib2","SARS-CoV-2","AAATAGTATACAGAAA",3,90.23,10.52,-0.31,0.04,3,1.01,0,">1 nonsynonymous","C6T N30M K56D",3
"lib2","SARS-CoV-2","AAATAGTATAGATTAT",3,64.01,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","I2V C150E Q176F V181R",4
"lib2","SARS-CoV-2","AAATAGTCAACACATA",5,41.13,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","G101V A190L",2
"lib2","SARS-CoV-2","AAATAGTCACTAAAAG",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A R16M K132W",3
"lib2","SARS-CoV-2","AAATAGTCCACTGTTA",18,124.24,9.61,-1.23,0.04,1.97,1.06,0,">1 nonsynonymous","N4R I88C",2
"lib2","SARS-CoV-2","AAATAGTCTAGTTAAG",5,5.9,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V20L D34I N157F L187P",4
"lib2","SARS-CoV-2","AAATAGTCTTCGGCAA",10,85.69,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L95H K198Q",2
"lib2","SARS-CoV-2","AAATAGTCTTTACCGT",3,21.98,6,-4.84,2,3,1.05,0,">1 nonsynonymous","F70S S129Y F156P",3
"lib2","SARS-CoV-2","AAATAGTGAAAACTGG",2,5.44,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","W23L R73C P96A",3
"lib2","SARS-CoV-2","AAATAGTGAACTTCTG",2,8.69,10.62,-0.21,0.2,2.79,1,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AAATAGTGATGAACCG",5,31.66,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","C6R G83V Y93P G116M Q168T",5
"lib2","SARS-CoV-2","AAATATAAAACCACAT",1,15.08,10.86,0.03,0.05,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATATAAAGCGATAC",18,331.94,9.21,-1.63,0.03,2.95,1.08,0,">1 nonsynonymous","T85H Y121H Q168L",3
"lib2","SARS-CoV-2","AAATATAACTTGAGAA",4,95.82,10.26,-0.57,0.04,2.77,1.03,0,"1 nonsynonymous","R127S",1
"lib2","SARS-CoV-2","AAATATAAGAAACATG",1,13.65,10.02,-0.81,0.12,2.86,1,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AAATATAATACGAGAA",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S A14L G155R S164M",4
"lib2","SARS-CoV-2","AAATATAATAGTCTAA",7,41.59,6,-4.84,0.9,3,1.1,0,">1 nonsynonymous","R16N C102P",2
"lib2","SARS-CoV-2","AAATATAATATGTAAG",2,87.93,10.79,-0.04,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATAATGGTCGTA",2,52.77,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","Y123S L162P Y178S",3
"lib2","SARS-CoV-2","AAATATAATTCTGTGG",5,51.72,8.04,-2.79,0.24,1.5,1.14,0.03,">1 nonsynonymous","G9F I28N K56F",3
"lib2","SARS-CoV-2","AAATATAATTGCTTGG",1,8.58,6.17,-4.67,2,3,1.03,0,">1 nonsynonymous","I72N I142T S164T",3
"lib2","SARS-CoV-2","AAATATACAACCCTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2L V37* R73T I104L S147T",5
"lib2","SARS-CoV-2","AAATATACAACTCTCA",5,0.97,NA,NA,NA,NA,NA,NA,"stop","E10Y T85* N107F",3
"lib2","SARS-CoV-2","AAATATACACACTAAA",11,155.72,10.85,0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATACACAGGAGG",4,91.75,9.28,-1.56,0.06,2.92,1.11,0,">1 nonsynonymous","S113G P169H",2
"lib2","SARS-CoV-2","AAATATACACATAAAG",4,73.93,8.7,-2.14,0.08,3,1.05,0,">1 nonsynonymous","G166F K198L",2
"lib2","SARS-CoV-2","AAATATACACCTCAAA",3,20.19,10.84,0.01,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATACACTTATTC",8,153.61,10.88,0.04,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATACCTTATCTA",1,14.24,10.75,-0.08,0.04,3,1,0,"1 nonsynonymous","I138Y",1
"lib2","SARS-CoV-2","AAATATACTAACCTGA",3,4.71,NA,NA,NA,NA,NA,NA,"stop","I88Q P177*",2
"lib2","SARS-CoV-2","AAATATAGAACCTGGA",1,110.57,9.97,-0.87,0.06,2.33,1.02,0,">1 nonsynonymous","F134L Y178T",2
"lib2","SARS-CoV-2","AAATATAGACTTTAAG",4,87.29,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9D R124M P149I",3
"lib2","SARS-CoV-2","AAATATAGATAAACAA",10,15.82,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","V65P V182P",2
"lib2","SARS-CoV-2","AAATATAGCACCTTAA",9,118.89,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4V L57Y C102L E154G V173D",5
"lib2","SARS-CoV-2","AAATATAGCTATGGCC",1,6.3,NA,NA,NA,NA,NA,NA,"stop","G86T A105N F126S P149* N171L",5
"lib2","SARS-CoV-2","AAATATATACATGATC",12,130.88,7.93,-2.91,0.15,1.76,1.09,0.01,">1 nonsynonymous","W106T F156R P169E",3
"lib2","SARS-CoV-2","AAATATATACTTTAGA",2,2.94,NA,NA,NA,NA,NA,NA,"stop","K56* T140H",2
"lib2","SARS-CoV-2","AAATATATATGGATTA",5,59.49,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V52T V77M G86T S113L Y119S",5
"lib2","SARS-CoV-2","AAATATATCAAACTTA",10,4,NA,NA,NA,NA,NA,NA,"stop","T15G C31F V37I N64M G86R K94F N157*",7
"lib2","SARS-CoV-2","AAATATATCACAAGTC",2,70.1,10.67,-0.17,0.04,2.97,1.04,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","AAATATATGACGTACA",1,45.99,10.78,-0.06,0.08,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATATGAGGTATA",8,23.25,8.37,-2.46,0.39,1.5,1.09,0.05,">1 nonsynonymous","S129A D137L S200V",3
"lib2","SARS-CoV-2","AAATATATGTAAGTAA",6,59.39,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R16S I72Y",2
"lib2","SARS-CoV-2","AAATATATTAAATTCG",4,13.94,10,-0.84,0.12,2.45,1,0.01,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","AAATATATTATGATAT",2,14.23,9.12,-1.71,0.23,2.19,1,0.01,">1 nonsynonymous","C6F F12L S139A",3
"lib2","SARS-CoV-2","AAATATATTCTTCTAT",1,57.28,10.23,-0.61,0.06,2.83,1.04,0,">1 nonsynonymous","A42Y I142H",2
"lib2","SARS-CoV-2","AAATATATTTAGTCTT",4,53.76,10.71,-0.13,0.04,2.95,1.06,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","AAATATCAAAATTCAG",2,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L Y91S F99L G146W E154H K199E",6
"lib2","SARS-CoV-2","AAATATCACTTTGACC",1,8.2,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","V11T R25E N64E",3
"lib2","SARS-CoV-2","AAATATCAGGTCACAT",9,21.49,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","C49T G86Q T201M",3
"lib2","SARS-CoV-2","AAATATCATCTAGGCA",1,10.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23G S69M S147F",3
"lib2","SARS-CoV-2","AAATATCATCTATGAA",5,23.94,9.6,-1.23,0.13,2.11,1.06,0.01,">1 nonsynonymous","D59A K94Q",2
"lib2","SARS-CoV-2","AAATATCCAACGCAAG",9,91.85,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A33N Y39A C61D A81R G86S S184N",6
"lib2","SARS-CoV-2","AAATATCCTCTGATGC",3,80.18,10.69,-0.15,0.04,2.95,1.05,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","AAATATCGAACCAATA",6,27.95,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F99K N157F A192Q",3
"lib2","SARS-CoV-2","AAATATCGACTGCGGA",11,98.32,9.05,-1.79,0.06,2.74,1.05,0,">1 nonsynonymous","N40S Q144S G146L",3
"lib2","SARS-CoV-2","AAATATCGATATTTAT",8,75.19,8.81,-2.03,0.07,2.28,1.11,0,">1 nonsynonymous","T3L S43G S139L F156T",4
"lib2","SARS-CoV-2","AAATATCGCTATCCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* E141R E154F",3
"lib2","SARS-CoV-2","AAATATCGTCGAACGT",5,58.71,9.18,-1.66,0.13,1.89,1.07,0.01,">1 nonsynonymous","N1V P7L T100H E154V",4
"lib2","SARS-CoV-2","AAATATCGTTTTTCGT",6,95.68,10.82,-0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATCTACTCCCTG",4,6.49,NA,NA,NA,NA,NA,NA,"stop","R16Q T55*",2
"lib2","SARS-CoV-2","AAATATCTCGCATATA",18,49.02,6,-4.84,2,1.5,1.35,0.02,">1 nonsynonymous","D59V W106V N120K F160S L183R",5
"lib2","SARS-CoV-2","AAATATCTGCGAACTT",1,9.68,10.8,-0.04,0.11,3,1,0.01,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","AAATATCTTATAAGCA",1,7.61,10.89,0.06,0.11,2.92,1.1,0,"1 nonsynonymous","S164E",1
"lib2","SARS-CoV-2","AAATATCTTCCAGATG",2,32.59,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","G172Y",1
"lib2","SARS-CoV-2","AAATATGAACTTCAGA",7,60,8.96,-1.88,0.3,1.5,1,0.04,">1 nonsynonymous","Y35P L60V A105N",3
"lib2","SARS-CoV-2","AAATATGAAGGTTGCT",1,59.12,9.71,-1.13,0.1,2.07,1.1,0.01,">1 nonsynonymous","K94F L122Y K128E",3
"lib2","SARS-CoV-2","AAATATGACAAAATTA",1,11.56,10.28,-0.56,0.16,2.55,1,0.02,">1 nonsynonymous","L60M Y91R",2
"lib2","SARS-CoV-2","AAATATGACCTGTGAG",5,86.61,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S108M R124W E135S",3
"lib2","SARS-CoV-2","AAATATGAGATAGTAT",3,90.3,8.67,-2.17,0.08,1.52,1.09,0,">1 nonsynonymous","A18V F44T G155E",3
"lib2","SARS-CoV-2","AAATATGATGAGAAAG",12,142.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35V D112K",2
"lib2","SARS-CoV-2","AAATATGCAGAACATA",10,2.79,NA,NA,NA,NA,NA,NA,"stop","Y91W N151*",2
"lib2","SARS-CoV-2","AAATATGCATAGAAAT",3,106.73,8.41,-2.43,0.12,2.16,1.07,0.01,"1 nonsynonymous","Y165C",1
"lib2","SARS-CoV-2","AAATATGCATTGGAAT",16,302,6.29,-4.55,0.34,1.6,1.13,0.01,">1 nonsynonymous","K48I C150G",2
"lib2","SARS-CoV-2","AAATATGCCCTTGCTT",1,34.71,10.63,-0.21,0.05,2.91,1.09,0,">1 nonsynonymous","L60H Q84R N130S",3
"lib2","SARS-CoV-2","AAATATGCCTAGCCGA",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I N58K A89Y P133R T170Q",5
"lib2","SARS-CoV-2","AAATATGCGAATCACA",4,128.09,8.47,-2.36,0.12,2.8,1.11,0.01,">1 nonsynonymous","G9T N110L L125T G155L",4
"lib2","SARS-CoV-2","AAATATGCGTAGCCAT",1,7.8,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","V37G D68M I88S C102S",4
"lib2","SARS-CoV-2","AAATATGCTAAATGAA",3,22.37,10.69,-0.14,0.07,2.99,1,0,">1 nonsynonymous","L5M N120S S129D",3
"lib2","SARS-CoV-2","AAATATGGACATTGCT",4,47.77,6.01,-4.82,1.26,1.5,1.16,0.03,">1 nonsynonymous","L5K W23K T46L W106L N118K",5
"lib2","SARS-CoV-2","AAATATGGACGAGATG",1,7.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88M G152V",2
"lib2","SARS-CoV-2","AAATATGGCACGCCCA",3,68.96,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V20R Q176W",2
"lib2","SARS-CoV-2","AAATATGGTGCGTAGG",5,24.69,10.87,0.03,0.06,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATATGTACCGTTTA",3,16.37,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L5M S29T Y93I K114T Y143L F167H",6
"lib2","SARS-CoV-2","AAATATGTATCGAACT",9,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M I104N",2
"lib2","SARS-CoV-2","AAATATGTTTAGGTGT",3,53.87,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5T V37D Y50K I72T G101L E154K",6
"lib2","SARS-CoV-2","AAATATGTTTTAACAC",2,9.13,9.99,-0.84,0.26,2,1,0.03,">1 nonsynonymous","E135S G152Y",2
"lib2","SARS-CoV-2","AAATATTAACCTAGTA",3,41.37,10.83,-0.01,0.08,2.91,1.11,0,"1 nonsynonymous","K128M",1
"lib2","SARS-CoV-2","AAATATTAATTACTCA",3,12.02,9.65,-1.18,0.12,2.37,1,0.01,">1 nonsynonymous","Y66C G155C",2
"lib2","SARS-CoV-2","AAATATTACAGGGGGT",6,31.55,8.78,-2.06,0.11,2.4,1.09,0.01,">1 nonsynonymous","F44L T170P",2
"lib2","SARS-CoV-2","AAATATTACGTGTGCA",4,22.12,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A67G G166M",2
"lib2","SARS-CoV-2","AAATATTAGAGAATAT",5,65.47,10.56,-0.28,0.04,2.95,1.06,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","AAATATTCACGACACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M D75L A89R L122Q",4
"lib2","SARS-CoV-2","AAATATTCCAACTATA",3,36.93,10.15,-0.69,0.07,2.79,1.05,0,">1 nonsynonymous","A42R V71M",2
"lib2","SARS-CoV-2","AAATATTCCCAATAAC",3,41.96,10.55,-0.29,0.06,2.93,1.07,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","AAATATTCCCACAAGC",8,129.91,6,-4.84,1.28,1.5,1.17,0.01,">1 nonsynonymous","R27C Y175G",2
"lib2","SARS-CoV-2","AAATATTCCTAACCAG",11,206.6,10.84,0.01,0.06,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATATTCTGTCTGAA",1,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L L60K E135N",3
"lib2","SARS-CoV-2","AAATATTGCTCAGCTG",3,7.82,7.49,-3.34,0.36,2.01,1,0.02,">1 nonsynonymous","L57C G101L G117T",3
"lib2","SARS-CoV-2","AAATATTGGTGCTAGC",7,52.29,10.71,-0.12,0.03,2.91,1.08,0,">1 nonsynonymous","T55K E135G Q163Y",3
"lib2","SARS-CoV-2","AAATATTGTAAGGACA",13,161.43,10.25,-0.59,0.05,2.74,1.04,0,">1 nonsynonymous","D98V K132F",2
"lib2","SARS-CoV-2","AAATATTGTCTACCTT",2,19.29,7.59,-3.25,0.31,1.5,1.06,0.07,">1 nonsynonymous","C61V K94T L122M",3
"lib2","SARS-CoV-2","AAATATTGTGAGAACA",3,14.25,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35P N107A F160D Y165P",4
"lib2","SARS-CoV-2","AAATATTTTAAAAGCT",2,63.11,10.55,-0.28,0.04,2.97,1.08,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","AAATCAAAAGCTTTCA",2,50.55,10.79,-0.04,0.07,2.84,1.12,0,"1 nonsynonymous","T85A",1
"lib2","SARS-CoV-2","AAATCAAACTAAAGCT",6,0.53,NA,NA,NA,NA,NA,NA,"stop","L60R G155* G174K V181T",4
"lib2","SARS-CoV-2","AAATCAAACTTTACCA",1,36.76,10.49,-0.34,0.03,2.92,1.04,0,">1 nonsynonymous","F12L A67V",2
"lib2","SARS-CoV-2","AAATCAAATAACACAA",9,119.44,8.21,-2.63,0.12,2.51,1.08,0.01,">1 nonsynonymous","N4Y N118D F126A",3
"lib2","SARS-CoV-2","AAATCAACCATGGCAG",9,148.19,10.9,0.06,0.06,2.97,1.05,0,"1 nonsynonymous","V153L",1
"lib2","SARS-CoV-2","AAATCAACGATCCTTG",4,48.87,7.25,-3.58,0.2,1.6,1.12,0.01,">1 nonsynonymous","N120T Y178R",2
"lib2","SARS-CoV-2","AAATCAACTCCATACC",3,35.56,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K56M N92W S129G Y165D",4
"lib2","SARS-CoV-2","AAATCAACTGTTATGT",3,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V I2M D34M C61H",4
"lib2","SARS-CoV-2","AAATCAACTTTACCAA",9,224.68,10.88,0.04,0.05,2.91,1.08,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","AAATCAAGAAGAAAAG",3,38.41,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y21L E141C F160T",3
"lib2","SARS-CoV-2","AAATCAAGACTACCCA",4,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S V103Y Y143K S184H",4
"lib2","SARS-CoV-2","AAATCAAGCACTCCGG",13,170.63,10.54,-0.3,0.03,2.94,1.03,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","AAATCAAGCATTATGT",15,70.47,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","T46K C61Q A81F L95H V181A",5
"lib2","SARS-CoV-2","AAATCAAGTAGGAAAC",1,16.22,9.06,-1.78,0.16,2.9,1,0.02,">1 nonsynonymous","W106F Y119H",2
"lib2","SARS-CoV-2","AAATCAATAAATTGCG",7,53.12,8.85,-1.99,0.22,1.5,1.02,0.02,">1 nonsynonymous","L5H L60F P82T S129N",4
"lib2","SARS-CoV-2","AAATCAATGAACAAAC",6,58.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41T T46L D112Y L162P",4
"lib2","SARS-CoV-2","AAATCAATGAGATGCT",3,97.78,10.86,0.02,0.06,2.96,1.05,0,">1 nonsynonymous","Y35W N64F D90S",3
"lib2","SARS-CoV-2","AAATCAATGGTGCCGA",14,77.09,8.87,-1.96,0.23,1.5,1,0.02,">1 nonsynonymous","V20N A42I",2
"lib2","SARS-CoV-2","AAATCAATTCTTATGC",2,13.05,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","N13G R127C",2
"lib2","SARS-CoV-2","AAATCACAAAGGCATT",2,56.15,9.64,-1.19,0.12,2.19,1.09,0,">1 nonsynonymous","F8M R16E F47K T201S",4
"lib2","SARS-CoV-2","AAATCACAACACATCT",2,29.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W106N A145L",2
"lib2","SARS-CoV-2","AAATCACAACCATCAC",14,85.5,6,-4.84,0.8,1.5,1.14,0.01,">1 nonsynonymous","A81M K94E I142M A190L",4
"lib2","SARS-CoV-2","AAATCACAAGCCCTGT",7,84.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23V K94Q R136L N151I Q168E",5
"lib2","SARS-CoV-2","AAATCACAATCACATT",6,57.76,10.93,0.09,0.06,2.93,1.05,0,"1 nonsynonymous","S29T",1
"lib2","SARS-CoV-2","AAATCACACATTAAGA",12,224.98,10.4,-0.43,0.04,2.93,1.04,0,">1 nonsynonymous","A33Q V37L A89S",3
"lib2","SARS-CoV-2","AAATCACACGTATATT",19,25.67,NA,NA,NA,NA,NA,NA,"stop","F44A T55* P149K",3
"lib2","SARS-CoV-2","AAATCACAGAAGATTC",7,62.51,10.78,-0.05,0.05,2.83,1.17,0,"1 nonsynonymous","S53T",1
"lib2","SARS-CoV-2","AAATCACATAAATATC",11,187.36,10.64,-0.19,0.03,2.95,1.06,0,">1 nonsynonymous","N4K S29P V37T",3
"lib2","SARS-CoV-2","AAATCACCAAAAGGGG",5,54.05,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","K94L F126S E141L",3
"lib2","SARS-CoV-2","AAATCACCGATCCCGA",7,12.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E V103K",2
"lib2","SARS-CoV-2","AAATCACGCCTGGATT",2,37.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P G51A C61G",3
"lib2","SARS-CoV-2","AAATCACGTCCATCGA",1,10.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y21V T140L P161H",3
"lib2","SARS-CoV-2","AAATCACTTAGCGCAT",13,9.43,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib2","SARS-CoV-2","AAATCACTTCTGAAAT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","S29A T85* A105I R127L F156V",5
"lib2","SARS-CoV-2","AAATCACTTTATAAGG",15,217.26,10.9,0.06,0.04,2.95,1.06,0,">1 nonsynonymous","S53N H189S",2
"lib2","SARS-CoV-2","AAATCAGAAAAGTTAT",3,0.93,NA,NA,NA,NA,NA,NA,"stop","P7E S45G N120* Y143R G152S S184H",6
"lib2","SARS-CoV-2","AAATCAGAGAAATCTA",10,95.81,8.44,-2.4,0.16,1.5,1.02,0.01,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","AAATCAGAGTACCAAT",7,85.08,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10D G83W R179V",3
"lib2","SARS-CoV-2","AAATCAGCTCGCACCT",15,3.02,NA,NA,NA,NA,NA,NA,"stop","F8* K198S",2
"lib2","SARS-CoV-2","AAATCAGCTTGTGGTA",2,46.37,9.35,-1.48,0.09,2.06,1.1,0,">1 nonsynonymous","S19L L188T",2
"lib2","SARS-CoV-2","AAATCAGGACAGCCTG",4,16.02,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","Y35H T63S I88L S113A K199Y",5
"lib2","SARS-CoV-2","AAATCAGGATGAGAGT",1,0.27,NA,NA,NA,NA,NA,NA,"stop","W23M F99S A105F D112*",4
"lib2","SARS-CoV-2","AAATCAGGTTAGTGTC",1,14.32,10.88,0.04,0.09,2.93,1.07,0,">1 nonsynonymous","R27A F44Y",2
"lib2","SARS-CoV-2","AAATCAGTAGAACATA",12,138.67,10.54,-0.29,0.03,2.92,1.08,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","AAATCAGTATTTATCA",5,65.41,10.62,-0.22,0.06,2.97,1.04,0,"1 nonsynonymous","T46Y",1
"lib2","SARS-CoV-2","AAATCAGTTAATAATA",3,13.35,8.22,-2.62,0.09,1.98,1.06,0,">1 nonsynonymous","G51H S108Q T148M",3
"lib2","SARS-CoV-2","AAATCATAACTTCATA",2,28.21,10.24,-0.59,0.04,2.93,1.02,0,">1 nonsynonymous","A14I K128N",2
"lib2","SARS-CoV-2","AAATCATAATACAAGT",8,46.85,7.24,-3.6,0.35,1.5,1.07,0.04,">1 nonsynonymous","W106R Y121R",2
"lib2","SARS-CoV-2","AAATCATACACTTACT",1,25.32,10.62,-0.22,0.04,2.9,1.09,0,">1 nonsynonymous","S41W D59S L122V",3
"lib2","SARS-CoV-2","AAATCATCACCGTAGC",3,28.14,8.17,-2.66,0.25,1.73,1.05,0.02,">1 nonsynonymous","G9S D98R Y121K T170N",4
"lib2","SARS-CoV-2","AAATCATCATAAACAA",2,24.81,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","W23Q N110M S139F",3
"lib2","SARS-CoV-2","AAATCATCGGAAGAGA",11,220.2,10.8,-0.04,0.05,2.99,1.04,0,">1 nonsynonymous","V37L D97R",2
"lib2","SARS-CoV-2","AAATCATCTTCACCGA",1,22.06,10.8,-0.03,0.08,2.78,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCATGAATAAATA",7,36.32,8.05,-2.78,0.2,1.5,1.1,0.01,">1 nonsynonymous","V20M S41D",2
"lib2","SARS-CoV-2","AAATCATGATTTAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","A89E N107R C150K F167*",4
"lib2","SARS-CoV-2","AAATCATGCCATGATC",2,117.38,9.79,-1.05,0.04,2.89,1.06,0,">1 nonsynonymous","K128N I142W",2
"lib2","SARS-CoV-2","AAATCATGGATTCTGC",6,115.18,10.82,-0.02,0.05,2.84,1.12,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","AAATCATGGTCAAATA",9,1.04,NA,NA,NA,NA,NA,NA,"stop","Y35* K48Y R124T",3
"lib2","SARS-CoV-2","AAATCATTAAAGGCAT",6,0.02,NA,NA,NA,NA,NA,NA,"stop","N4S F17* I88W V115E G152Y",5
"lib2","SARS-CoV-2","AAATCATTAACTTTCA",3,35.3,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G86M Y91D",2
"lib2","SARS-CoV-2","AAATCATTAATATGCA",1,7.21,9.91,-0.93,0.09,2.74,1.17,0,">1 nonsynonymous","N1S Y121I T201P",3
"lib2","SARS-CoV-2","AAATCATTATCAATAC",4,3.89,NA,NA,NA,NA,NA,NA,"stop","T3R F47* I88L S147M F156V F167K V173W",7
"lib2","SARS-CoV-2","AAATCATTTACACGGC",5,129.34,10.9,0.07,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCCAAATCCTGGT",1,13.18,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","N1E C31P N64L N107T",4
"lib2","SARS-CoV-2","AAATCCAACTGACTAC",11,1.02,NA,NA,NA,NA,NA,NA,"stop","K26* S69R D137H",3
"lib2","SARS-CoV-2","AAATCCAACTTTTAAG",7,36.61,9.42,-1.42,0.11,1.86,1.09,0.01,">1 nonsynonymous","N58R V71A",2
"lib2","SARS-CoV-2","AAATCCAATCAATTGA",3,12.85,6.04,-4.79,1.6,1.5,1.12,0.05,">1 nonsynonymous","G9E L60H G86L",3
"lib2","SARS-CoV-2","AAATCCACAGAATTAC",11,109.36,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14N P96H F99C K199N",4
"lib2","SARS-CoV-2","AAATCCACGACGTCTT",6,53.87,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","G86I D90G",2
"lib2","SARS-CoV-2","AAATCCACGTTGCCAG",1,11.63,10.38,-0.46,0.15,2.68,1.14,0.01,">1 nonsynonymous","K48C D98K",2
"lib2","SARS-CoV-2","AAATCCACTGCCACCA",4,0.28,NA,NA,NA,NA,NA,NA,"stop","N4S K48* V103F N107R",4
"lib2","SARS-CoV-2","AAATCCAGAATACCAA",15,75,10.76,-0.08,0.05,2.92,1.07,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","AAATCCAGCAAGTTAA",3,42.47,10.06,-0.77,0.05,2.95,1.09,0,">1 nonsynonymous","T148A G174T",2
"lib2","SARS-CoV-2","AAATCCAGGCGAATCT",5,56.59,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","A14T P96R Y121N S139R Y159S",5
"lib2","SARS-CoV-2","AAATCCAGGGAATAGG",5,3.25,NA,NA,NA,NA,NA,NA,"stop","N4I R78A A81W N107C I138H V173*",6
"lib2","SARS-CoV-2","AAATCCAGTACTAGTT",6,8.36,9.85,-0.98,0.33,2.11,1.12,0.03,"1 nonsynonymous","G172K",1
"lib2","SARS-CoV-2","AAATCCAGTACTCTAG",3,56.38,6.72,-4.12,0.46,1.5,1.12,0.03,">1 nonsynonymous","N107E T148S V181N",3
"lib2","SARS-CoV-2","AAATCCAGTGACTTGA",10,150.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F12G L95N R136V",3
"lib2","SARS-CoV-2","AAATCCAGTTGAGACT",4,43.44,8.31,-2.52,0.14,2.23,1.12,0.01,">1 nonsynonymous","N13Y T63M Y119K",3
"lib2","SARS-CoV-2","AAATCCATAAATTTAG",7,35.74,9.23,-1.61,0.09,2.04,1.04,0,">1 nonsynonymous","Y39N I72M",2
"lib2","SARS-CoV-2","AAATCCATATAATCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V77K N110* K114L I142S",4
"lib2","SARS-CoV-2","AAATCCATCCAATATG",7,38.73,9.66,-1.18,0.15,2.02,1.16,0.01,">1 nonsynonymous","A33M L60P P96N",3
"lib2","SARS-CoV-2","AAATCCATTACCGGAT",2,20.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5F V37E W106V G117E V182C",5
"lib2","SARS-CoV-2","AAATCCATTCTGCTGC",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* G83Y I88N P133Y",4
"lib2","SARS-CoV-2","AAATCCATTGCCTTTC",4,97.78,8.82,-2.01,0.06,2.81,1.02,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","AAATCCATTTATTCAC",4,130.64,10.75,-0.09,0.04,2.89,1.09,0,">1 nonsynonymous","N1R L5R G196R",3
"lib2","SARS-CoV-2","AAATCCCAATAGCGCG",2,87.51,10.72,-0.11,0.04,2.99,1.02,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","AAATCCCAGTGACTAT",5,74.54,10.88,0.05,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCCCATAGAATCA",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R L95G N130Y",3
"lib2","SARS-CoV-2","AAATCCCATCAACATA",12,65.58,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D59G A105D L125F T140L G146V",5
"lib2","SARS-CoV-2","AAATCCCATCAATGTT",7,126.51,10.87,0.03,0.05,2.83,1.16,0,">1 nonsynonymous","I28L K199E",2
"lib2","SARS-CoV-2","AAATCCCCACCCACGA",2,16.85,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","V103A E135S Y143I",3
"lib2","SARS-CoV-2","AAATCCCCCATCACCA",1,12.01,10.55,-0.29,0.06,3,1.04,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","AAATCCCCCTAAGTGC",3,41.05,9.18,-1.65,0.18,1.61,1.12,0.01,">1 nonsynonymous","T63A A89N T100H",3
"lib2","SARS-CoV-2","AAATCCCCTCTCACTC",4,44.56,10.24,-0.6,0.06,2.85,1,0,">1 nonsynonymous","T3A C31T",2
"lib2","SARS-CoV-2","AAATCCCCTGGTGCAA",11,46.11,9.15,-1.68,0.13,2.14,1.05,0.01,">1 nonsynonymous","C6A K56P",2
"lib2","SARS-CoV-2","AAATCCCGAGGCAATT",10,151.42,10.17,-0.66,0.05,2.6,1.03,0,">1 nonsynonymous","P96K K199M",2
"lib2","SARS-CoV-2","AAATCCCGCTCAATTT",12,134.44,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8T S41V N92E P133L E154F Q176K",6
"lib2","SARS-CoV-2","AAATCCCTAGGCCCCG",3,58.25,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19L F44T V52F",3
"lib2","SARS-CoV-2","AAATCCCTCCATTCAC",11,79.46,10.09,-0.74,0.05,2.61,1.1,0,">1 nonsynonymous","V37L P133M",2
"lib2","SARS-CoV-2","AAATCCCTGTCCATAT",6,50.12,9.51,-1.33,0.07,2.55,1.05,0,">1 nonsynonymous","S45T P149N G155C",3
"lib2","SARS-CoV-2","AAATCCCTTATGACAA",16,310.97,10.77,-0.07,0.04,2.96,1.06,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","AAATCCCTTTCGCCAT",2,0.28,NA,NA,NA,NA,NA,NA,"stop","I28L G101E T140F V173*",4
"lib2","SARS-CoV-2","AAATCCGAAAGCCTGA",11,114.97,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S113R V180M",2
"lib2","SARS-CoV-2","AAATCCGACCCGACAT",1,6.64,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","V11H Y50R Y93G Y119T",4
"lib2","SARS-CoV-2","AAATCCGAGGTAAATA",6,25.27,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8T S41M G51M Q84K F134A T140L",6
"lib2","SARS-CoV-2","AAATCCGCAAATCATT",4,1.19,NA,NA,NA,NA,NA,NA,"stop","I2N K128*",2
"lib2","SARS-CoV-2","AAATCCGCAACCAGTA",5,7.3,10.85,0.01,0.13,2.88,1.17,0,">1 nonsynonymous","Y35L S53T",2
"lib2","SARS-CoV-2","AAATCCGCAGTCAAAT",3,46.93,9.79,-1.05,0.06,2.29,1.04,0,"1 nonsynonymous","L38T",1
"lib2","SARS-CoV-2","AAATCCGCATAGTTTA",2,102.83,7.53,-3.31,0.15,1.5,1.08,0.01,">1 nonsynonymous","N40D S113Y K128L",3
"lib2","SARS-CoV-2","AAATCCGCCACGGGGG",4,6,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","S19R P133F V173P",3
"lib2","SARS-CoV-2","AAATCCGCTGAATGTA",6,78.32,10.8,-0.03,0.05,2.96,1.05,0,">1 nonsynonymous","S43A A190S T201I",3
"lib2","SARS-CoV-2","AAATCCGGTAAATATT",7,43.99,10.78,-0.06,0.05,2.91,1.08,0,"1 nonsynonymous","K128G",1
"lib2","SARS-CoV-2","AAATCCGGTTAGTACA",8,2.6,NA,NA,NA,NA,NA,NA,"stop","E10G D68G C102* N107S E141S",5
"lib2","SARS-CoV-2","AAATCCGTAACCTATT",2,6.2,6.54,-4.29,2,1.5,1.22,0.03,">1 nonsynonymous","A89K F99V N107E",3
"lib2","SARS-CoV-2","AAATCCTAATTATTCA",7,40.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31A P161R",2
"lib2","SARS-CoV-2","AAATCCTACGAGGTAG",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y V153R",2
"lib2","SARS-CoV-2","AAATCCTAGCCTACTG",2,40.78,10.7,-0.14,0.05,3,1.01,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","AAATCCTATAAAAATA",11,27.9,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","D34V T100P I104W",3
"lib2","SARS-CoV-2","AAATCCTATAGTCATA",7,98.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D112R Y121G R127A G146S",4
"lib2","SARS-CoV-2","AAATCCTCAAGACTCC",6,91.86,10.08,-0.76,0.11,2.46,1.02,0,">1 nonsynonymous","E10P T15M",2
"lib2","SARS-CoV-2","AAATCCTCGCGATATG",1,22.44,10.82,-0.02,0.05,2.96,1.05,0,">1 nonsynonymous","S41D L60M T201Y",3
"lib2","SARS-CoV-2","AAATCCTGCCCCGCTA",8,105.89,10.83,-0.01,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCCTTACAACACA",9,49.31,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","S19R T46D E76G P149L",4
"lib2","SARS-CoV-2","AAATCCTTAGGATTCC",2,24.74,10.66,-0.18,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCCTTCACCTAAT",4,37.57,6,-4.84,2,3,1.09,0,">1 nonsynonymous","W23T K56M S139I",3
"lib2","SARS-CoV-2","AAATCGAAACCTGAAG",7,118.21,9.91,-0.92,0.06,2.68,1.06,0,">1 nonsynonymous","F44E Q84S I138A",3
"lib2","SARS-CoV-2","AAATCGAACCCGACTA",1,19.99,9.21,-1.62,0.16,2.82,1.1,0.01,">1 nonsynonymous","L5R Y39T C61R F126K",4
"lib2","SARS-CoV-2","AAATCGAACTCAAGTT",1,12.71,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T55A P96E L162T",3
"lib2","SARS-CoV-2","AAATCGAATGGTTCTT",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F T170R",2
"lib2","SARS-CoV-2","AAATCGACATACCAAG",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L G83S",2
"lib2","SARS-CoV-2","AAATCGACTATACCCG",5,67.91,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34W A89V Y119P C195M",4
"lib2","SARS-CoV-2","AAATCGACTTACAGAA",3,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R S19E P54L D90I L122V Y143R Y178S",7
"lib2","SARS-CoV-2","AAATCGAGAACTGTCC",8,58.65,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","F17C S43C K132M Q144L",4
"lib2","SARS-CoV-2","AAATCGAGCAACATAG",8,20.04,6,-4.84,1.21,1.5,1.24,0.07,">1 nonsynonymous","V37I F99P N107E Y165T",4
"lib2","SARS-CoV-2","AAATCGAGTTACTTTT",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R Y66P F99D K199M",4
"lib2","SARS-CoV-2","AAATCGAGTTATATAA",6,68.96,10.35,-0.48,0.05,2.83,1.08,0,">1 nonsynonymous","S45M I138E",2
"lib2","SARS-CoV-2","AAATCGATAGCATAAT",9,58.38,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89L F99C",2
"lib2","SARS-CoV-2","AAATCGATCAATTGAT",2,15.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8S S41W Y91E D98V V173R L188V",6
"lib2","SARS-CoV-2","AAATCGCCACCGAAAG",9,111.63,10.46,-0.37,0.05,2.87,1.08,0,"1 nonsynonymous","F62E",1
"lib2","SARS-CoV-2","AAATCGCCGATAATAG",3,26.86,10.78,-0.06,0.09,2.86,1.15,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","AAATCGCCGCCCCTCC",2,0.31,NA,NA,NA,NA,NA,NA,"stop","R16S R73L Y91* T201L",4
"lib2","SARS-CoV-2","AAATCGCCTTCCAAAG",2,41.98,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G86D Y143H G196C",3
"lib2","SARS-CoV-2","AAATCGCGTAATAATG",8,1.97,NA,NA,NA,NA,NA,NA,"stop","K56C A81P W106* Y143M P177Q",5
"lib2","SARS-CoV-2","AAATCGCTAATTCGAG",1,8.8,10.36,-0.48,0.1,2.96,1,0,">1 nonsynonymous","W106F S200T",2
"lib2","SARS-CoV-2","AAATCGGAGTGTGACT",1,13.42,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10L G86K V153W",3
"lib2","SARS-CoV-2","AAATCGGATTATTGTG",5,34.91,9.4,-1.43,0.22,1.5,1,0.02,">1 nonsynonymous","V103A T148V",2
"lib2","SARS-CoV-2","AAATCGGCCGTGGTTA",13,59.09,9.3,-1.53,0.19,1.5,1.09,0.02,">1 nonsynonymous","N1E A14G Y123L F160L",4
"lib2","SARS-CoV-2","AAATCGGCCTCAAAAG",3,11.16,9.15,-1.69,0.25,1.69,1.2,0.02,">1 nonsynonymous","L60R Y91T",2
"lib2","SARS-CoV-2","AAATCGGGCACCTTCG",4,35.04,10.8,-0.03,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCGGGGCAACTTA",4,85.6,10.37,-0.46,0.06,2.84,1.09,0,">1 nonsynonymous","G83H S139C S200L",3
"lib2","SARS-CoV-2","AAATCGTAAGTTAGAC",5,16.67,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15G S53L L60Q R136E Y165P",5
"lib2","SARS-CoV-2","AAATCGTAGGCCCAAT",19,109.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R16D D68V Q84L",3
"lib2","SARS-CoV-2","AAATCGTAGTAATTTT",2,73.41,10.85,0.01,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCGTATACGAATA",2,70.96,6,-4.84,0.73,3,1.35,0.01,">1 nonsynonymous","E10L A18L V37M R127G F160A",5
"lib2","SARS-CoV-2","AAATCGTATTAGAGAA",5,37.46,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I2P P96S Q176R",3
"lib2","SARS-CoV-2","AAATCGTGTTAGACTG",4,66.16,10.47,-0.37,0.05,2.86,1,0,"1 nonsynonymous","W106F",1
"lib2","SARS-CoV-2","AAATCGTTAAAGTACT",13,133.36,9.53,-1.31,0.07,2.24,1.08,0,">1 nonsynonymous","T148F P161A G196R",3
"lib2","SARS-CoV-2","AAATCGTTACGAGAAC",1,27.38,10.71,-0.12,0.06,2.84,1.17,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","AAATCTAAACATAAGC",6,45.76,6,-4.84,2,1.5,1.1,0,"1 nonsynonymous","Y50P",1
"lib2","SARS-CoV-2","AAATCTAAACATAAGG",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G I138N",2
"lib2","SARS-CoV-2","AAATCTAAACATAGGC",3,81.18,10.23,-0.61,0.09,2.46,1.03,0,">1 nonsynonymous","P133R T201H",2
"lib2","SARS-CoV-2","AAATCTAAAGAGACGT",8,74.04,10.68,-0.15,0.04,2.96,1.07,0,">1 nonsynonymous","R27M T55G",2
"lib2","SARS-CoV-2","AAATCTAAAGGCAGAA",3,40.22,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F12T K56V P82R N120R N151Q Q168D",6
"lib2","SARS-CoV-2","AAATCTAAATACTAAT",4,110.78,10.92,0.08,0.05,2.92,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCTAACAGGTAAG",31,8.63,NA,NA,NA,NA,NA,NA,"stop","V37* S139R",2
"lib2","SARS-CoV-2","AAATCTAACCCTTAAT",8,187.76,10.86,0.02,0.04,2.91,1.09,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","AAATCTAAGATACTTT",1,46.32,10.5,-0.34,0.06,2.87,1.06,0,"1 nonsynonymous","G83W",1
"lib2","SARS-CoV-2","AAATCTAAGTCCTAAA",1,37.94,10.53,-0.31,0.07,2.99,1.04,0,">1 nonsynonymous","T55L G83N V115Q K198A",4
"lib2","SARS-CoV-2","AAATCTAATGTTACTA",6,0.38,NA,NA,NA,NA,NA,NA,"stop","S19L Y39* F99C",3
"lib2","SARS-CoV-2","AAATCTACAACAAATT",2,17.65,10.9,0.06,0.08,3,1.02,0,">1 nonsynonymous","T55N S200W",2
"lib2","SARS-CoV-2","AAATCTACAACCCCTA",4,42.75,10.38,-0.46,0.06,2.88,1.07,0,"1 nonsynonymous","Y91H",1
"lib2","SARS-CoV-2","AAATCTACCCTAAGTC",1,17.16,9.17,-1.67,0.1,2.49,1.03,0,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","AAATCTACCGGAAACG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15A",1
"lib2","SARS-CoV-2","AAATCTACGGCATACA",3,30.11,8.72,-2.11,0.34,1.5,1.14,0.04,">1 nonsynonymous","T15Q W106C K132M",3
"lib2","SARS-CoV-2","AAATCTACGTATTTAT",4,132.92,10.8,-0.04,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCTACTCACAAAA",2,29.48,10.87,0.04,0.08,2.81,1.12,0,">1 nonsynonymous","S36T P149T",2
"lib2","SARS-CoV-2","AAATCTAGAAAACACT",2,38.15,10.34,-0.49,0.07,2.95,1.07,0,">1 nonsynonymous","V37A S43N I138S P149T",4
"lib2","SARS-CoV-2","AAATCTAGAGAAAACT",7,122.27,10.78,-0.06,0.04,2.95,1.06,0,"1 nonsynonymous","G152A",1
"lib2","SARS-CoV-2","AAATCTAGTGAGAGAT",1,8.31,6.27,-4.57,0.38,3,1.01,0,">1 nonsynonymous","D34S P82E T140E",3
"lib2","SARS-CoV-2","AAATCTATAACTTGAC",3,10.33,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","Y39G Y121S G172A",3
"lib2","SARS-CoV-2","AAATCTATAATTCTGG",7,90.79,8.69,-2.15,0.11,2.89,1.11,0,"1 nonsynonymous","R73E",1
"lib2","SARS-CoV-2","AAATCTATATATCCTG",9,31.23,9.28,-1.56,0.14,1.62,1.08,0.01,">1 nonsynonymous","L5A L95T E186S",3
"lib2","SARS-CoV-2","AAATCTATCAACCTCC",2,45.91,9.98,-0.86,0.1,2.5,1.01,0,">1 nonsynonymous","Y35K L60R K128D",3
"lib2","SARS-CoV-2","AAATCTATCCCTTACG",2,10.82,10.69,-0.14,0.07,2.89,1.16,0,"1 nonsynonymous","K114C",1
"lib2","SARS-CoV-2","AAATCTATCTAACTAA",9,126.31,10.79,-0.05,0.06,2.9,1.09,0,"1 nonsynonymous","L122C",1
"lib2","SARS-CoV-2","AAATCTATGCCGCAAG",9,161.23,10.83,-0.01,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCTATTATCGGCC",1,14.66,9.92,-0.91,0.16,2.84,1.07,0.01,">1 nonsynonymous","K87S S184L",2
"lib2","SARS-CoV-2","AAATCTCAAATGTCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","V37W D90* D97I",3
"lib2","SARS-CoV-2","AAATCTCACTTTAAGC",11,137.94,10.8,-0.04,0.04,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATCTCAGATTATCT",16,101.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R16F T55S D68W N109F",4
"lib2","SARS-CoV-2","AAATCTCCACACGACC",2,12.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20M F44S C102D Y119L G155M T201I",6
"lib2","SARS-CoV-2","AAATCTCCACCAACCG",2,18.26,8.73,-2.11,0.13,2.61,1.09,0.01,">1 nonsynonymous","T100H G146C",2
"lib2","SARS-CoV-2","AAATCTCCATAATAGT",8,89.41,10.79,-0.05,0.05,2.92,1.11,0,">1 nonsynonymous","R27S E141D",2
"lib2","SARS-CoV-2","AAATCTCCGAACTTCC",1,15.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16T G101H R127A T148N",4
"lib2","SARS-CoV-2","AAATCTCCGTGCACTA",2,0.78,NA,NA,NA,NA,NA,NA,"stop","P96H I104T K128I N171*",4
"lib2","SARS-CoV-2","AAATCTCCTATCAATT",5,14.88,6,-4.84,2,1.5,1.24,0.08,">1 nonsynonymous","N24R D90E Y121F L162N L183T H189R",6
"lib2","SARS-CoV-2","AAATCTCGCAATGTAC",10,102.45,10.77,-0.07,0.05,2.91,1.08,0,">1 nonsynonymous","A42K F160S",2
"lib2","SARS-CoV-2","AAATCTCTCTTTAGAA",3,58.88,10.79,-0.04,0.03,2.95,1.06,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","AAATCTGATAATTTAC",6,40.38,6.21,-4.63,0.43,1.5,1.09,0.01,">1 nonsynonymous","D112K Q163T A192F",3
"lib2","SARS-CoV-2","AAATCTGCAAATGTAA",2,13.98,10.23,-0.6,0.12,2.81,1.02,0,">1 nonsynonymous","S45E I142S N171T",3
"lib2","SARS-CoV-2","AAATCTGCCTGTCAAT",10,33.65,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L38R A89T D98K N107M S129Y",5
"lib2","SARS-CoV-2","AAATCTGGACGGTAGG",2,11.13,10.75,-0.08,0.07,2.9,1.12,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AAATCTGTAATTTATC",1,0.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAATCTGTATCGAGGA",2,43.7,10.76,-0.07,0.02,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATCTGTCATCAATC",11,114.25,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","L38S V182Q",2
"lib2","SARS-CoV-2","AAATCTTAAAAGCTAA",3,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D I88R N107V",3
"lib2","SARS-CoV-2","AAATCTTAAGACCACA",3,47.12,8.67,-2.17,0.15,1.93,1.04,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","AAATCTTATAAAGGCC",6,44.13,9.77,-1.07,0.1,2.2,1.04,0,">1 nonsynonymous","N1M S41L Y178S",3
"lib2","SARS-CoV-2","AAATCTTATTGTAAGG",18,263.04,10.62,-0.22,0.02,2.94,1.07,0,"1 nonsynonymous","N4I",1
"lib2","SARS-CoV-2","AAATCTTCAATCATAG",2,29.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A89Y A105E",2
"lib2","SARS-CoV-2","AAATCTTCAGACTAGA",3,1.35,NA,NA,NA,NA,NA,NA,"stop","T55G F62* A81I S139T T201L",5
"lib2","SARS-CoV-2","AAATCTTCGCCTCGCG",5,47.47,8.9,-1.93,0.15,1.6,1.13,0.01,">1 nonsynonymous","V77K K114V V153I",3
"lib2","SARS-CoV-2","AAATCTTCTCAGGTCT",8,28.46,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L5C S45T P96L G155Q R179S",5
"lib2","SARS-CoV-2","AAATCTTGAACCCTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","G51* I88N N107Q",3
"lib2","SARS-CoV-2","AAATCTTGTTTTTAAA",10,86.62,10.83,0,0.05,2.96,1.07,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AAATCTTTCAGAGTGA",12,152.27,10.84,0.01,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATCTTTCCAGACGC",5,69.77,10.71,-0.12,0.05,2.94,1.07,0,">1 nonsynonymous","Q84R N120E",2
"lib2","SARS-CoV-2","AAATGAAAAACGCGCT",4,114.89,10.19,-0.64,0.07,2.73,1.04,0,">1 nonsynonymous","P7Y E141R K198I",3
"lib2","SARS-CoV-2","AAATGAAAAATGCAAG",1,28.61,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","E10C F44R N107S R127L N151L",5
"lib2","SARS-CoV-2","AAATGAAAACACAAAA",6,81.77,8.15,-2.69,0.27,1.5,1.03,0.04,">1 nonsynonymous","T15N Q79K F126H E135S",4
"lib2","SARS-CoV-2","AAATGAAAAGTACCAT",3,2.18,NA,NA,NA,NA,NA,NA,"stop","G117* Y123E S139* G146C",4
"lib2","SARS-CoV-2","AAATGAAAATCACGAA",6,43.4,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G86S R124G",2
"lib2","SARS-CoV-2","AAATGAAACAGCCCCG",13,119.25,10.96,0.13,0.05,2.93,1.09,0,">1 nonsynonymous","Y35W S43H K132E",3
"lib2","SARS-CoV-2","AAATGAAACAGGGAAA",14,293.03,9,-1.83,0.03,2.93,1.04,0,">1 nonsynonymous","Y119L P149L",2
"lib2","SARS-CoV-2","AAATGAAACATGTAAG",5,25.66,9.47,-1.37,0.13,2.17,1.1,0.01,">1 nonsynonymous","T15A T100R Q144Y",3
"lib2","SARS-CoV-2","AAATGAAACTTGCCAA",7,147.65,10.32,-0.51,0.04,2.85,1.02,0,"1 nonsynonymous","Q84F",1
"lib2","SARS-CoV-2","AAATGAAAGATTGTAT",6,92.57,10.56,-0.28,0.03,2.94,1.06,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","AAATGAAAGGTCAATT",3,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L T55F G174R",3
"lib2","SARS-CoV-2","AAATGAAAGTTAATTT",3,71.94,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T3G Y159S",2
"lib2","SARS-CoV-2","AAATGAAATGTAAGGC",3,116.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D98N N110G V153S C158Y",4
"lib2","SARS-CoV-2","AAATGAAATTAAATAA",3,76.63,10.9,0.07,0.05,2.91,1.09,0,">1 nonsynonymous","I72C N130K",2
"lib2","SARS-CoV-2","AAATGAAATTACGCGA",1,9.7,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S45D C49L P96I Y119N",4
"lib2","SARS-CoV-2","AAATGAAATTCCTAGC",12,85.73,9.87,-0.97,0.11,2.46,1.03,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","AAATGAAATTGATATA",2,7.41,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","G9D G83Q K94L",3
"lib2","SARS-CoV-2","AAATGAAATTGTTACC",2,73.29,10.78,-0.06,0.05,2.97,1.04,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","AAATGAACAGTTTAAC",1,0.92,NA,NA,NA,NA,NA,NA,"stop","C6K A42* D97I",3
"lib2","SARS-CoV-2","AAATGAACGGCTACGA",1,20.47,6,-4.84,2,1.5,1.22,0.08,">1 nonsynonymous","V37G R73M G172R",3
"lib2","SARS-CoV-2","AAATGAACTAGCGGAG",11,71.64,6.33,-4.51,0.65,1.5,1.26,0.02,">1 nonsynonymous","N64W A81S D112T A190E",4
"lib2","SARS-CoV-2","AAATGAACTGCGCATA",8,14.44,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A67D Y123V",2
"lib2","SARS-CoV-2","AAATGAACTGCGGCGT",7,225.47,10.14,-0.69,0.03,2.95,1,0,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","AAATGAAGACTGGTCG",7,90.41,9.95,-0.89,0.05,2.88,1.05,0,">1 nonsynonymous","Y35L Y121M T148W",3
"lib2","SARS-CoV-2","AAATGAAGATCAGCTA",2,15.57,10.5,-0.34,0.07,2.97,1.02,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","AAATGAAGCCACCGTT",3,42.96,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","P7L P96T I104Q F167S",4
"lib2","SARS-CoV-2","AAATGAAGCGCGCAAT",3,8.05,NA,NA,NA,NA,NA,NA,"stop","R25* S36P Q144L F167R Q176K",5
"lib2","SARS-CoV-2","AAATGAAGGAATGACC",20,327.79,10.82,-0.02,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGAAGGCAATAAA",6,92.01,10.88,0.05,0.05,2.92,1.09,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","AAATGAAGGTGTACTA",2,33.46,10.97,0.13,0.04,2.99,1.01,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","AAATGAAGTGCAGCTG",2,51.32,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A14S R25V S36V G51T D90R N157V",6
"lib2","SARS-CoV-2","AAATGAATAAATTGAG",2,38.73,10.61,-0.22,0.03,2.99,1,0,">1 nonsynonymous","L5E N13D",2
"lib2","SARS-CoV-2","AAATGAATCTCTACAA",3,64.87,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Y50L K56M G86E I138M F167T",5
"lib2","SARS-CoV-2","AAATGAATTCACTTCC",3,58.39,10.84,0,0.07,2.95,1.09,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","AAATGAATTCTTCCTG",17,22.18,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","L5R L95T L122M N130L V181A",5
"lib2","SARS-CoV-2","AAATGAATTGCAAATA",4,11.14,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A67P T140Y P149I G172V",4
"lib2","SARS-CoV-2","AAATGACAAAAAAGCT",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97A A105C",2
"lib2","SARS-CoV-2","AAATGACAAAGATAAC",1,21.47,10.36,-0.48,0.08,2.9,1.06,0,"1 nonsynonymous","S29E",1
"lib2","SARS-CoV-2","AAATGACAACAAGGCC",2,52.17,10.56,-0.28,0.05,3,1,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","AAATGACAAGATTAGA",6,72.03,9.59,-1.25,0.04,2.96,1.03,0,">1 nonsynonymous","Y35M D98N E141M G174C",4
"lib2","SARS-CoV-2","AAATGACAATCTCATC",7,99.9,9.48,-1.35,0.04,2.92,1.09,0,">1 nonsynonymous","Y39V G117S",2
"lib2","SARS-CoV-2","AAATGACACGAACACT",1,14.89,10.67,-0.16,0.07,2.95,1.06,0,">1 nonsynonymous","I2N R27W",2
"lib2","SARS-CoV-2","AAATGACAGTTCCCTA",1,15.14,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L38S N107Y P149L Q176R",4
"lib2","SARS-CoV-2","AAATGACCACACGCTA",4,24.25,10.66,-0.18,0.06,2.91,1.08,0,"1 nonsynonymous","K198Y",1
"lib2","SARS-CoV-2","AAATGACCAGCAAGTA",11,150.73,10.9,0.07,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGACCGCACTAAG",6,2.38,NA,NA,NA,NA,NA,NA,"stop","N4S V71* H189S",3
"lib2","SARS-CoV-2","AAATGACCTATCTTAC",1,2.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","AAATGACGAAATCTTT",14,83.13,9.87,-0.96,0.08,2.2,1,0,">1 nonsynonymous","V37W C49L",2
"lib2","SARS-CoV-2","AAATGACGGAAAATAA",5,55.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A81K P96K P133K",3
"lib2","SARS-CoV-2","AAATGACGGAGGAAAA",19,464.62,8.71,-2.13,0.07,2.93,1.07,0,">1 nonsynonymous","A42P C61T K114E N157S S200F",5
"lib2","SARS-CoV-2","AAATGACTAGTTTTCC",5,29.7,6,-4.84,2,1.5,1.43,0.08,">1 nonsynonymous","S45L C61F V103R N151I T201S",5
"lib2","SARS-CoV-2","AAATGACTATGTATCG",1,14.87,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C49H Y119A",2
"lib2","SARS-CoV-2","AAATGACTCCGGTAAA",6,5.62,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","N1K G9L S36Y T100N S113Y L122V C195F",7
"lib2","SARS-CoV-2","AAATGACTCTATATCG",3,6.17,10.41,-0.42,0.11,2.9,1.13,0.01,"1 nonsynonymous","T15M",1
"lib2","SARS-CoV-2","AAATGACTGATGACTG",5,20.42,10.55,-0.29,0.1,2.77,1.15,0,">1 nonsynonymous","N13H G146S",2
"lib2","SARS-CoV-2","AAATGACTTAACGAAA",7,32.88,9.63,-1.21,0.25,1.5,1.06,0.03,">1 nonsynonymous","N1K A42I C49L",3
"lib2","SARS-CoV-2","AAATGAGAAGTACTCC",4,2.47,NA,NA,NA,NA,NA,NA,"stop","A89Q F99* G146N",3
"lib2","SARS-CoV-2","AAATGAGAATCGAAAT",3,15.83,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R27G S41D S45K N58E Y91G F167S",6
"lib2","SARS-CoV-2","AAATGAGACCTTTCAA",8,142.94,10.34,-0.49,0.05,2.78,1.05,0,"1 nonsynonymous","P133H",1
"lib2","SARS-CoV-2","AAATGAGCATAAGTCT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P Y35C E141Y G155W",4
"lib2","SARS-CoV-2","AAATGAGCGGAATGTT",10,35.37,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","S41L I72P E141G",3
"lib2","SARS-CoV-2","AAATGAGGCAAACATA",11,185.82,8.25,-2.59,0.11,2.08,1.06,0,">1 nonsynonymous","L60N R73Y T100V",3
"lib2","SARS-CoV-2","AAATGAGTCAACATTT",2,14.08,10.89,0.05,0.08,2.91,1.12,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","AAATGAGTGTCATTCA",6,96.52,10.76,-0.08,0.03,2.99,1.01,0,">1 nonsynonymous","R16S C61I",2
"lib2","SARS-CoV-2","AAATGATAACCTTGAG",7,92.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37R P82M S113G K128V",4
"lib2","SARS-CoV-2","AAATGATACAAAGTAC",1,6.64,10.72,-0.11,0.05,2.91,1.1,0,">1 nonsynonymous","S29K C61G",2
"lib2","SARS-CoV-2","AAATGATACCAGTCTA",8,50.71,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","P96I T148C",2
"lib2","SARS-CoV-2","AAATGATAGACAAGTG",5,0.5,NA,NA,NA,NA,NA,NA,"stop","N40S D112*",2
"lib2","SARS-CoV-2","AAATGATAGATGAAAA",1,7.21,8.97,-1.87,0.11,1.95,1.01,0,">1 nonsynonymous","G9C A18T S41H F126L E141S",5
"lib2","SARS-CoV-2","AAATGATATAATACTG",6,41.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8E C31F V103L Y119I R136P",5
"lib2","SARS-CoV-2","AAATGATATCCAGCCA",5,29.64,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","P133E V180E",2
"lib2","SARS-CoV-2","AAATGATCAAGATATA",1,30.61,10.99,0.15,0.1,2.78,1.08,0,">1 nonsynonymous","I2D S164H",2
"lib2","SARS-CoV-2","AAATGATCCAAAATTA",4,45.57,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G51R Q79L I88E Y93K",4
"lib2","SARS-CoV-2","AAATGATCTCTGTTAT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","N13H S45F V115I L122F G152S Y175*",6
"lib2","SARS-CoV-2","AAATGATGAAAAATCA",2,10.22,10.5,-0.34,0.12,2.93,1.09,0.01,">1 nonsynonymous","S41T Q144P",2
"lib2","SARS-CoV-2","AAATGATGTATTCTGG",5,0.66,NA,NA,NA,NA,NA,NA,"stop","K48P K94G F99E N120R Q176*",5
"lib2","SARS-CoV-2","AAATGATTATAAGGAG",2,6.5,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3M A33P G86Q N118R G146L",5
"lib2","SARS-CoV-2","AAATGATTCACCCCCG",2,62.72,10.63,-0.2,0.04,2.95,1.04,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","AAATGATTCATATACA",7,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q S41Q Y91I",3
"lib2","SARS-CoV-2","AAATGATTTTATGAGG",1,19.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F44P K56W V77A",3
"lib2","SARS-CoV-2","AAATGCAAAATATAAC",3,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V D98T R127A G166L Q176L E186F",6
"lib2","SARS-CoV-2","AAATGCAAAGTAGAAA",1,20.05,10.31,-0.53,0.07,3,1.03,0,"1 nonsynonymous","T55C",1
"lib2","SARS-CoV-2","AAATGCAAATGATCAA",7,75.06,10.85,0.01,0.05,2.93,1.09,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","AAATGCAAATGCCAGG",10,53.73,8.65,-2.19,0.16,1.58,1.09,0.01,">1 nonsynonymous","L131T G155R",2
"lib2","SARS-CoV-2","AAATGCAACGACACGC",1,0.35,NA,NA,NA,NA,NA,NA,"stop","W23Y A33L D68L L131D T201*",5
"lib2","SARS-CoV-2","AAATGCAACGACGATG",1,6.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36K D68S A89S K114R",4
"lib2","SARS-CoV-2","AAATGCAACTAATCAG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","L5V D112* T170R",3
"lib2","SARS-CoV-2","AAATGCAATAAAGAAA",1,22.3,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","S19D V37Y I88G P149F Y178S",5
"lib2","SARS-CoV-2","AAATGCACAAAAACCT",12,58.51,9.06,-1.77,0.07,1.66,1.06,0,">1 nonsynonymous","L38Q K56F",2
"lib2","SARS-CoV-2","AAATGCACGCCTATTA",5,69.82,9.77,-1.07,0.13,1.96,1.06,0.01,">1 nonsynonymous","W23A K56H F160Y",3
"lib2","SARS-CoV-2","AAATGCACGTTCTACT",9,170.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44A A89L",2
"lib2","SARS-CoV-2","AAATGCAGCAGAGGCC",4,50.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59R A89Y A105W L122T V153H",5
"lib2","SARS-CoV-2","AAATGCAGCATTGACA",5,11.78,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","P7L T15K A42F P82K E141L G155I Q163S",7
"lib2","SARS-CoV-2","AAATGCAGGACATAAG",2,44.57,10.52,-0.31,0.07,2.95,1.03,0,">1 nonsynonymous","V11L Y39V R78S",3
"lib2","SARS-CoV-2","AAATGCAGGTATACTG",1,3.69,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib2","SARS-CoV-2","AAATGCAGTCAACTTG",1,86.09,10.89,0.06,0.05,2.88,1.12,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","AAATGCATAACAGGAT",4,29.62,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F8P Y21T C49A A81F F167P",5
"lib2","SARS-CoV-2","AAATGCATATGAGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129L P197T",2
"lib2","SARS-CoV-2","AAATGCATCCCTTGCA",1,32.49,8.38,-2.45,0.19,1.71,1.13,0.01,">1 nonsynonymous","N1H D90A Y121W",3
"lib2","SARS-CoV-2","AAATGCATGAGTTTAA",7,51.68,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D90W D112S",2
"lib2","SARS-CoV-2","AAATGCATGCTGTGCC",1,9.64,9.27,-1.57,0.06,3,1.02,0,">1 nonsynonymous","A42C Y119P",2
"lib2","SARS-CoV-2","AAATGCATTCTTCGAC",1,36.06,10.83,-0.01,0.03,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGCATTGGATGTA",8,2.22,NA,NA,NA,NA,NA,NA,"stop","N13H W23* F44T Y91W W106V N118D K198L",7
"lib2","SARS-CoV-2","AAATGCCAAAAGGCAT",4,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54A E154R L162W",3
"lib2","SARS-CoV-2","AAATGCCAACATTGTT",2,5.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q G83I T100S E141S",4
"lib2","SARS-CoV-2","AAATGCCAAGCATCTA",1,13.09,10.97,0.14,0.11,2.97,1.07,0,"1 nonsynonymous","T63S",1
"lib2","SARS-CoV-2","AAATGCCAAGCGTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6I R27P Q84* F160G",4
"lib2","SARS-CoV-2","AAATGCCACAGGACGT",3,85.45,10.24,-0.6,0.05,2.82,1,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","AAATGCCACTCGGCTT",7,75.61,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5G I88W G101V Y119N",4
"lib2","SARS-CoV-2","AAATGCCCCAGTAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y F134G",2
"lib2","SARS-CoV-2","AAATGCCCCGCTTATG",5,126.38,8.27,-2.56,0.13,1.92,1.08,0.01,">1 nonsynonymous","T55S F156H Y165R",3
"lib2","SARS-CoV-2","AAATGCCCCGTCAGTT",3,40.33,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","C6T R25E D68Q P149T",4
"lib2","SARS-CoV-2","AAATGCCCCTGTCACA",4,62.97,10.76,-0.07,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGCCCGTAGTTCA",7,100.55,10.66,-0.18,0.04,2.87,1.08,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","AAATGCCGAATCTCGT",2,70.11,8.26,-2.58,0.16,2.1,1.03,0.01,">1 nonsynonymous","N4A V52H N151E G166L",4
"lib2","SARS-CoV-2","AAATGCCGACAGCTCA",2,21.8,10.31,-0.53,0.17,2.67,1.02,0.01,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","AAATGCCGTGAAAAGA",7,22.9,10.62,-0.22,0.11,2.72,1.14,0.01,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","AAATGCGAAGAACCAA",2,68.75,10.69,-0.14,0.02,2.96,1.02,0,">1 nonsynonymous","K56Y V173E",2
"lib2","SARS-CoV-2","AAATGCGACCCGCACG",10,91.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59S N64F D98G D112S Y119V",5
"lib2","SARS-CoV-2","AAATGCGACCTGAAAA",8,80.38,10.32,-0.52,0.06,2.96,1.07,0,"1 nonsynonymous","P169V",1
"lib2","SARS-CoV-2","AAATGCGACGAAAACG",8,161.59,7.97,-2.86,0.13,2.45,1.09,0.01,">1 nonsynonymous","N58F D97N L125D",3
"lib2","SARS-CoV-2","AAATGCGAGATAGGCT",2,31.84,10.78,-0.06,0.07,2.91,1.09,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","AAATGCGATAACATGG",8,77.59,10.74,-0.09,0.03,2.97,1.05,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","AAATGCGATCCCCTAC",5,49.33,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14L L57D L95R D112S",4
"lib2","SARS-CoV-2","AAATGCGCATTTGCCT",2,36.18,10.25,-0.58,0.04,2.81,1.05,0,"1 nonsynonymous","D34G",1
"lib2","SARS-CoV-2","AAATGCGCCGCTTACT",8,53.68,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V71R K114A",2
"lib2","SARS-CoV-2","AAATGCGCCGTGCACG",7,140.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q84T N107S R124Y",3
"lib2","SARS-CoV-2","AAATGCGCCTCTATAC",22,108.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35H A105G N118E F160L",4
"lib2","SARS-CoV-2","AAATGCGGTATCAGCA",1,22.14,9.81,-1.03,0.1,2.05,1.08,0.01,">1 nonsynonymous","V20T A42V",2
"lib2","SARS-CoV-2","AAATGCGTGACCTTGG",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18K D112W S129N",3
"lib2","SARS-CoV-2","AAATGCGTGAGTCAAT",4,81.93,10.82,-0.02,0.03,2.97,1.04,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","AAATGCGTTGCTTGGG",10,59,8.17,-2.67,0.19,1.63,1.05,0.01,">1 nonsynonymous","W106K G117V S200N",3
"lib2","SARS-CoV-2","AAATGCTAAGACACCA",4,31.5,10.91,0.08,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGCTAGGTATGAT",8,94.15,10.8,-0.03,0.06,2.95,1.08,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","AAATGCTATAGTTTTG",2,18.73,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N92M Y123K G166E Q176L",4
"lib2","SARS-CoV-2","AAATGCTATCTTAAAT",1,10.38,9.87,-0.97,0.1,2.91,1.14,0.01,">1 nonsynonymous","N4T A67I G155D",3
"lib2","SARS-CoV-2","AAATGCTCACATAATG",3,12.72,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","Y50N N107V T148S Q168R",4
"lib2","SARS-CoV-2","AAATGCTCCAGACTAT",3,6.67,10.31,-0.52,0.16,2.61,1.13,0.01,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","AAATGCTCCTATGCAA",1,6.88,10.87,0.04,0.27,2.71,1,0.03,">1 nonsynonymous","N1K I72V Y143H",3
"lib2","SARS-CoV-2","AAATGCTCTACTAACC",5,35.77,9.91,-0.93,0.1,2.23,1.05,0,">1 nonsynonymous","W106I Y143F",2
"lib2","SARS-CoV-2","AAATGCTGAATGAGTA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","Q163* F167T",2
"lib2","SARS-CoV-2","AAATGCTGATCTTCCT",5,95.49,10.17,-0.67,0.06,2.81,1.02,0,">1 nonsynonymous","P7I V153F",2
"lib2","SARS-CoV-2","AAATGCTGTTTTTATA",6,147.79,10.42,-0.42,0.05,2.88,1.09,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AAATGCTTCATATCTA",3,4.88,NA,NA,NA,NA,NA,NA,"stop","A14* C61S V77M S139C",4
"lib2","SARS-CoV-2","AAATGCTTTAGGGAAC",11,61.08,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14D K94V D98P T140N",4
"lib2","SARS-CoV-2","AAATGCTTTGAGAACG",3,21.19,6,-4.84,2,3,1.21,0.03,">1 nonsynonymous","D98R Y119V F160Y Y178R L183N",5
"lib2","SARS-CoV-2","AAATGGAACGTCAGCG",1,37.43,10.76,-0.08,0.06,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGGAAGTTACAAT",10,93.96,8.39,-2.44,0.1,2.62,1.04,0,">1 nonsynonymous","S113F S129G S200M",3
"lib2","SARS-CoV-2","AAATGGAATAAGGCAG",9,6.52,NA,NA,NA,NA,NA,NA,"stop","V71* K114R P133Y",3
"lib2","SARS-CoV-2","AAATGGAATATTTTGA",4,39.69,10.93,0.09,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGGAATCACGATG",5,75.96,10.69,-0.15,0.05,2.87,1.14,0,"1 nonsynonymous","G196N",1
"lib2","SARS-CoV-2","AAATGGAATCTAGTAT",3,93.54,10.83,0,0.04,2.92,1.11,0,">1 nonsynonymous","V37K G51N",2
"lib2","SARS-CoV-2","AAATGGACAACTCGTG",3,67.15,8.24,-2.6,0.13,2.39,1.17,0.01,">1 nonsynonymous","P54C G166F",2
"lib2","SARS-CoV-2","AAATGGACCACTTAAT",8,48.6,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V37Y S53G A105K Y119M S147V T201S",6
"lib2","SARS-CoV-2","AAATGGACCCAGGTAT",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70I Y123S",2
"lib2","SARS-CoV-2","AAATGGACCGGTCGCC",7,33.2,10.45,-0.38,0.06,2.8,1.1,0,">1 nonsynonymous","Y35T S43F",2
"lib2","SARS-CoV-2","AAATGGACGTTTAAAC",3,40.63,10.81,-0.03,0.08,2.88,1.13,0,"1 nonsynonymous","K48I",1
"lib2","SARS-CoV-2","AAATGGAGAACCATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N24W N58Y G86L L125*",4
"lib2","SARS-CoV-2","AAATGGAGAATTTGAT",1,26.94,10.22,-0.61,0.1,2.74,1.14,0,">1 nonsynonymous","F62R E141K S200L",3
"lib2","SARS-CoV-2","AAATGGAGAGCCGGTG",14,121.96,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D68R A81I",2
"lib2","SARS-CoV-2","AAATGGAGCTGATTAC",1,2.43,NA,NA,NA,NA,NA,NA,"stop","D34F G51F Q168* P197V",4
"lib2","SARS-CoV-2","AAATGGAGGAACTGCG",13,109.57,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A33R D98C C158V",3
"lib2","SARS-CoV-2","AAATGGAGTAAAACCA",6,95.96,10.85,0.01,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGGATAAAGATGC",6,72.06,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N30M Y50R P54K P82S N107P S113N Y143L",7
"lib2","SARS-CoV-2","AAATGGATAATAAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G Y165Q",2
"lib2","SARS-CoV-2","AAATGGATCCGATACC",17,18.59,8.38,-2.45,0.29,1.5,1.04,0.05,">1 nonsynonymous","C102W E186V A192Y",3
"lib2","SARS-CoV-2","AAATGGCAAATGACTT",12,57.19,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T15W Y21L A67T K132A I142T",5
"lib2","SARS-CoV-2","AAATGGCAACAAACCT",2,20.43,10,-0.83,0.15,2.02,1,0.01,">1 nonsynonymous","T55V F99M G152N",3
"lib2","SARS-CoV-2","AAATGGCATAATAACA",16,134.8,8.97,-1.86,0.05,2.12,1.08,0,">1 nonsynonymous","T46C L122H K128Y N151M P169H",5
"lib2","SARS-CoV-2","AAATGGCCGGCCAGGA",5,52.49,10.05,-0.79,0.04,2.82,1.09,0,"1 nonsynonymous","C31L",1
"lib2","SARS-CoV-2","AAATGGCCTGAACCGA",8,91.6,7.66,-3.17,0.14,1.5,1.03,0.01,">1 nonsynonymous","T100C R127T T140H",3
"lib2","SARS-CoV-2","AAATGGGAGATCGTGC",6,34.71,9.68,-1.16,0.1,2.07,1.05,0,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","AAATGGGCAAACCCTG",8,99.13,6.71,-4.13,0.53,1.5,1.38,0.05,">1 nonsynonymous","D90K D112G V173L",3
"lib2","SARS-CoV-2","AAATGGGCAGGACTAC",11,238.24,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F12L Y39N S53L T63K Y143N G155D",6
"lib2","SARS-CoV-2","AAATGGGGATACACAA",12,117.99,10.83,-0.01,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATGGGGGGCAAAAC",8,34.7,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I2Y D59R G86W Y123A Y165W",5
"lib2","SARS-CoV-2","AAATGGGTAGGAAGAT",9,225.42,10.74,-0.1,0.04,2.94,1.07,0,">1 nonsynonymous","Y39S A190T",2
"lib2","SARS-CoV-2","AAATGGGTATGGCTTA",3,0,NA,NA,NA,NA,NA,NA,"stop","N24L C61S K128*",3
"lib2","SARS-CoV-2","AAATGGGTCTAACTCT",4,45.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K48Q W106C I138R G155F Q163R P169S",6
"lib2","SARS-CoV-2","AAATGGTAAGACACAA",11,130.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33P L38H G83S P96N P177A",5
"lib2","SARS-CoV-2","AAATGGTACGCTATAT",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112S V173N",2
"lib2","SARS-CoV-2","AAATGGTATAATCATA",7,163.21,10.26,-0.57,0.05,2.71,1.09,0,">1 nonsynonymous","N24L T201Q",2
"lib2","SARS-CoV-2","AAATGGTATACTCTAA",5,0.24,NA,NA,NA,NA,NA,NA,"stop","T55C A81S L95* F156T",4
"lib2","SARS-CoV-2","AAATGGTGATTGGTGA",1,12.59,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","S69L Y143S E154P",3
"lib2","SARS-CoV-2","AAATGGTGCAAATTAG",2,27.97,7.67,-3.16,0.29,1.5,1.18,0.03,">1 nonsynonymous","T55S Y91F D112I S139V",4
"lib2","SARS-CoV-2","AAATGGTTTTTCCATT",7,44.45,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","L131R",1
"lib2","SARS-CoV-2","AAATGGTTTTTTATAG",7,112.76,6,-4.84,2,1.5,1.12,0,"1 nonsynonymous","D112P",1
"lib2","SARS-CoV-2","AAATGTAAACAACGGC",6,5.64,NA,NA,NA,NA,NA,NA,"stop","N58K G83C N120* S129G",4
"lib2","SARS-CoV-2","AAATGTAAAGGTAACC",1,8.74,10.08,-0.75,0.19,2.43,1,0.01,">1 nonsynonymous","N1K A105I",2
"lib2","SARS-CoV-2","AAATGTAAGCAGGCAA",3,26.83,8.3,-2.54,0.41,1.5,1,0.07,">1 nonsynonymous","Q84N D97V C102F",3
"lib2","SARS-CoV-2","AAATGTACAAAGCGTC",6,0.97,NA,NA,NA,NA,NA,NA,"stop","F44E A89R A105N E135* G146V",5
"lib2","SARS-CoV-2","AAATGTACACCATAGC",9,215.49,8.62,-2.22,0.08,2.82,1.05,0,">1 nonsynonymous","Y21F N118T G155S F160H",4
"lib2","SARS-CoV-2","AAATGTACCAAAAAAT",9,3.1,NA,NA,NA,NA,NA,NA,"stop","S53*",1
"lib2","SARS-CoV-2","AAATGTACCCCTTCCT",1,9.55,6.08,-4.75,1.02,1.5,1.07,0.02,">1 nonsynonymous","N13I L38A Y121T",3
"lib2","SARS-CoV-2","AAATGTAGAAGTGCTG",3,19.69,6,-4.84,1.02,2.34,1.18,0.02,">1 nonsynonymous","Y123D P149R",2
"lib2","SARS-CoV-2","AAATGTAGGTTTTTAC",1,7.06,9.8,-1.04,0.15,2.15,1.02,0.01,">1 nonsynonymous","E10S S43V W106L",3
"lib2","SARS-CoV-2","AAATGTATAAAAAATC",32,195.73,6.02,-4.82,0.67,1.5,1.15,0.01,">1 nonsynonymous","K56L W106I G152P F156N",4
"lib2","SARS-CoV-2","AAATGTATAAGGTAAT",5,40.97,6,-4.84,2,3,1.27,0.03,">1 nonsynonymous","A14T S43V G86I G166A",4
"lib2","SARS-CoV-2","AAATGTATACCACCAT",3,56.15,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","G86Q F134D",2
"lib2","SARS-CoV-2","AAATGTATAGAAGACG",5,34.47,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R73F I104K",2
"lib2","SARS-CoV-2","AAATGTATAGGTTTAA",9,100,9.04,-1.8,0.1,1.63,1.15,0,">1 nonsynonymous","W106I K132G A145S",3
"lib2","SARS-CoV-2","AAATGTATGTAAGGAA",16,220.19,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","T63L F70I L95Q",3
"lib2","SARS-CoV-2","AAATGTATTACAACAG",2,0.55,NA,NA,NA,NA,NA,NA,"stop","N130* G155S",2
"lib2","SARS-CoV-2","AAATGTCAAAAAAACT",1,39.85,10.59,-0.24,0.06,2.97,1.03,0,"1 nonsynonymous","A42N",1
"lib2","SARS-CoV-2","AAATGTCAAACATGAG",2,10.26,8.54,-2.3,0.31,1.5,1.06,0.05,">1 nonsynonymous","L60A G86H P149G",3
"lib2","SARS-CoV-2","AAATGTCAAGAGATTA",4,59.72,9.19,-1.65,0.08,2.73,1.11,0,">1 nonsynonymous","Y39C Y143V",2
"lib2","SARS-CoV-2","AAATGTCATATTATAT",5,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H A89T T100N L183P",4
"lib2","SARS-CoV-2","AAATGTCATCTTAATG",3,78.19,10.28,-0.55,0.04,2.84,1.03,0,">1 nonsynonymous","L60Y D97N F99Y",3
"lib2","SARS-CoV-2","AAATGTCATTACAATT",1,19.68,10.3,-0.53,0.1,2.67,1.07,0,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","AAATGTCCCTATAAGG",9,217.81,9.37,-1.47,0.06,1.98,1.07,0,">1 nonsynonymous","R136E A145S",2
"lib2","SARS-CoV-2","AAATGTCCTCGACGAA",2,12.67,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1Y R25I E141D",3
"lib2","SARS-CoV-2","AAATGTCGACGAGCCA",1,10.99,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V77G G86Y V103D I138R",4
"lib2","SARS-CoV-2","AAATGTCGACGATTGT",4,80.72,10.14,-0.69,0.06,2.61,1.07,0,">1 nonsynonymous","D98I E141P T201M",3
"lib2","SARS-CoV-2","AAATGTCTAACCTTTT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","F12H Y123* E186Y",3
"lib2","SARS-CoV-2","AAATGTCTACACAACC",11,1.04,NA,NA,NA,NA,NA,NA,"stop","T3* F126S C150T S200W",4
"lib2","SARS-CoV-2","AAATGTCTAGTCAATT",1,25.82,9.38,-1.45,0.1,2.55,1.18,0.01,">1 nonsynonymous","N107K N120R",2
"lib2","SARS-CoV-2","AAATGTCTTTAACGAA",6,53.04,6.41,-4.42,0.52,1.5,1.2,0.03,"1 nonsynonymous","D68A",1
"lib2","SARS-CoV-2","AAATGTGACTCAACTT",1,12.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13Y K87Y F99S R124L Q144H",5
"lib2","SARS-CoV-2","AAATGTGCAATTAAAA",3,47.19,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6L R16I N58M D98V I142A",5
"lib2","SARS-CoV-2","AAATGTGCGCTATCTA",6,18.7,6.29,-4.55,0.99,1.5,1.18,0.05,">1 nonsynonymous","E10W S41D L57G I88V S108K S129K",6
"lib2","SARS-CoV-2","AAATGTGCGTGTGCGG",10,179.89,9.29,-1.54,0.04,2.96,1.07,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","AAATGTGGCTTCAAAC",8,70.17,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14I S113P Y165S K198F",4
"lib2","SARS-CoV-2","AAATGTGGTCACCTTG",5,50.09,10.18,-0.65,0.08,2.63,1.03,0,">1 nonsynonymous","T55G A105V",2
"lib2","SARS-CoV-2","AAATGTTAACTCTGCT",9,0.12,NA,NA,NA,NA,NA,NA,"stop","S41L T63*",2
"lib2","SARS-CoV-2","AAATGTTCAATCGACT",1,41.81,8.24,-2.59,0.25,1.72,1.1,0.02,">1 nonsynonymous","N40Y A67I G117D T140Q",4
"lib2","SARS-CoV-2","AAATGTTCTAGTTCTA",7,100.78,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","N4A G172T",2
"lib2","SARS-CoV-2","AAATGTTGTGACTCCT",11,1,NA,NA,NA,NA,NA,NA,"stop","I104* R127* Y165E Y175V",4
"lib2","SARS-CoV-2","AAATGTTGTTAGCGGG",18,105.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L5S G83R K87S N92K N171L G172V",6
"lib2","SARS-CoV-2","AAATGTTGTTGGAAAG",15,112.09,6,-4.84,2,2.41,1.12,0,">1 nonsynonymous","N24K S36L D59N P96Y K132N",5
"lib2","SARS-CoV-2","AAATGTTTACTCATCA",5,13.33,10.09,-0.75,0.13,2.73,1.13,0,">1 nonsynonymous","C6F A33R",2
"lib2","SARS-CoV-2","AAATGTTTAGTATAAA",4,0.62,NA,NA,NA,NA,NA,NA,"stop","I28K A33I A42M K48Y I80Y N118V R127*",7
"lib2","SARS-CoV-2","AAATTAAAAAAAACTA",2,8.56,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","T140I N171D V182P",3
"lib2","SARS-CoV-2","AAATTAAAAAAGAACA",1,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","AAATTAAAAATTACAA",2,23.86,10.92,0.08,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTAAAACTTATGC",2,22.68,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","D68M G86Y C158T",3
"lib2","SARS-CoV-2","AAATTAAAAGTTGAAG",1,37.91,10.82,-0.01,0.05,2.89,1.13,0,">1 nonsynonymous","H189K S200F",2
"lib2","SARS-CoV-2","AAATTAAAATACCTGC",3,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S P96V V182A",3
"lib2","SARS-CoV-2","AAATTAAAATTTCGAA",11,243.96,10.44,-0.4,0.04,2.93,1.06,0,"1 nonsynonymous","G116F",1
"lib2","SARS-CoV-2","AAATTAAACAGATACT",1,12.72,10.71,-0.13,0.1,3,1.03,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","AAATTAAACCCGTACA",1,1.18,NA,NA,NA,NA,NA,NA,"stop","K87F Y121* P169S",3
"lib2","SARS-CoV-2","AAATTAAACTCTTGAT",3,139.85,10.07,-0.76,0.07,2.45,1.06,0,">1 nonsynonymous","D59L P96S",2
"lib2","SARS-CoV-2","AAATTAAAGACTAACC",7,151.11,10.84,0.01,0.04,2.98,1.04,0,"1 nonsynonymous","K199I",1
"lib2","SARS-CoV-2","AAATTAAAGCAGTGCA",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144F P161K E186G",3
"lib2","SARS-CoV-2","AAATTAAAGCATCGCA",5,3.07,NA,NA,NA,NA,NA,NA,"stop","L122* C158L Y165D",3
"lib2","SARS-CoV-2","AAATTAAATATACCGA",1,8.13,10.17,-0.67,0.06,2.04,1,0,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","AAATTAAATCGTCTAC",2,6.82,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","P7A I72E G101Y",3
"lib2","SARS-CoV-2","AAATTAAATTCAATAT",2,7.45,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","D34T G86K",2
"lib2","SARS-CoV-2","AAATTAACAAAAACCT",4,64.07,10.88,0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTAACAAAGCCGA",1,18.9,10.9,0.06,0.18,2.67,1.18,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AAATTAACAAATGCTG",5,17.55,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","S45R D68L K87E S113N",4
"lib2","SARS-CoV-2","AAATTAACACACAAAC",3,13.77,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","I88N C150G T170R",3
"lib2","SARS-CoV-2","AAATTAACATATGATC",10,100.91,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","F44L G146M C150V F167Q",4
"lib2","SARS-CoV-2","AAATTAACGATACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* P169L V181H",3
"lib2","SARS-CoV-2","AAATTAACGTGGCAAA",12,0.45,NA,NA,NA,NA,NA,NA,"stop","D75*",1
"lib2","SARS-CoV-2","AAATTAACGTGGGCGA",3,23.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q R27E S43P F70S Q144R G155D",6
"lib2","SARS-CoV-2","AAATTAACGTTATACA",2,45.79,8.74,-2.09,0.1,2.55,1.04,0,">1 nonsynonymous","S129T E141G E154F P191I K199E",5
"lib2","SARS-CoV-2","AAATTAACTAACTATT",11,111.04,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N58D N92W N107L",3
"lib2","SARS-CoV-2","AAATTAACTCTGTCCT",9,145.37,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F17E F167L",2
"lib2","SARS-CoV-2","AAATTAACTTAGATTA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N4* E141S",2
"lib2","SARS-CoV-2","AAATTAACTTCCATGC",2,7.97,9.59,-1.25,0.12,2.08,1,0,">1 nonsynonymous","N1V Y91I K128G N151L",4
"lib2","SARS-CoV-2","AAATTAAGAACACATT",3,15.17,8.64,-2.19,0.13,2.97,1,0.01,"1 nonsynonymous","S113K",1
"lib2","SARS-CoV-2","AAATTAAGCATTCTAC",7,107.1,9.06,-1.77,0.06,2.88,1.12,0,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","AAATTAAGGATTGCAC",10,87.04,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V37L E76T G83I A89T T170L T201K",6
"lib2","SARS-CoV-2","AAATTAATAACACGAA",9,2.21,NA,NA,NA,NA,NA,NA,"stop","L5* F12A S36Y F99Y F156W P169L",6
"lib2","SARS-CoV-2","AAATTAATAATCGACA",6,23.77,6.28,-4.56,0.63,2.26,1.21,0.01,">1 nonsynonymous","C49D G83K W106R V115M G146Q",5
"lib2","SARS-CoV-2","AAATTAATAATGAAAT",3,45.12,10.92,0.09,0.06,2.89,1.09,0,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","AAATTAATACGATACC",5,14.85,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F44L A89P A145D G152K E186I",5
"lib2","SARS-CoV-2","AAATTAATACTAATCC",10,91.78,10.44,-0.4,0.03,2.96,1.03,0,">1 nonsynonymous","G9R T100N",2
"lib2","SARS-CoV-2","AAATTAATAGCCCGCG",7,0.27,NA,NA,NA,NA,NA,NA,"stop","F47* T55P F62* W106S S129C I142T",6
"lib2","SARS-CoV-2","AAATTAATAGGATTAC",6,97.53,10.44,-0.39,0.06,2.91,1.07,0,">1 nonsynonymous","Y91M K198A",2
"lib2","SARS-CoV-2","AAATTAATCACAATAG",9,187.62,6.97,-3.86,0.2,1.5,1.12,0.01,">1 nonsynonymous","K87Y C150I",2
"lib2","SARS-CoV-2","AAATTAATCGCATGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","I28* Y35P S41F E135* L188T S200K",6
"lib2","SARS-CoV-2","AAATTAATCGTCCAGG",10,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L D90N",2
"lib2","SARS-CoV-2","AAATTAATCTGAAATC",3,9.84,8.9,-1.93,0.24,2.11,1.26,0.04,">1 nonsynonymous","E10V T100C E186I C195K",4
"lib2","SARS-CoV-2","AAATTAATGACAAGAG",5,52.63,10.66,-0.17,0.06,2.88,1.08,0,">1 nonsynonymous","N4C S200I",2
"lib2","SARS-CoV-2","AAATTAATGACAATAC",3,59.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37L A81S G86D W106D V115C T148M",6
"lib2","SARS-CoV-2","AAATTAATGGGTCTCT",2,7.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G86K D98F S113L",4
"lib2","SARS-CoV-2","AAATTAATTACACCAT",6,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R P96Y R179N",3
"lib2","SARS-CoV-2","AAATTAATTAGCATAA",14,111.22,9.29,-1.55,0.1,1.82,1.1,0,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","AAATTAATTCACTATT",1,18.55,10.5,-0.33,0.07,2.87,1.09,0,"1 nonsynonymous","F156W",1
"lib2","SARS-CoV-2","AAATTAATTGATGATC",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L E141N",2
"lib2","SARS-CoV-2","AAATTACAACTTGAAA",2,53.94,11.06,0.22,0.09,2.88,1.12,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","AAATTACACCATTTAA",6,0.05,NA,NA,NA,NA,NA,NA,"stop","T3P L57P D90T Q163*",4
"lib2","SARS-CoV-2","AAATTACACCTACCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y Q84M Y93A G155E",4
"lib2","SARS-CoV-2","AAATTACAGGACAACA",4,41.86,10.76,-0.07,0.08,2.7,1.32,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTACAGGCCGTGT",8,98.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99S G155L P161R T201E",4
"lib2","SARS-CoV-2","AAATTACAGTAAAATT",8,117.64,10.85,0.02,0.04,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTACATCCAAATA",1,48.29,8.43,-2.41,0.15,1.95,1.06,0.01,">1 nonsynonymous","N58Y A89S T140L F156G",4
"lib2","SARS-CoV-2","AAATTACATGAGCGGC",3,0.79,NA,NA,NA,NA,NA,NA,"stop","C61Q F156* C195Y",3
"lib2","SARS-CoV-2","AAATTACATGTGGACC",12,8.72,9.51,-1.32,0.19,2.1,1,0.02,">1 nonsynonymous","Y39M D97R L125I T201F",4
"lib2","SARS-CoV-2","AAATTACCTACCTAAC",1,16.42,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","V11T C102Y R124C",3
"lib2","SARS-CoV-2","AAATTACCTAGGGACA",3,9.59,10.69,-0.14,0.07,3,1,0,">1 nonsynonymous","G9K T148Y",2
"lib2","SARS-CoV-2","AAATTACGAACTACAA",4,32.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L38K F62M G83A",3
"lib2","SARS-CoV-2","AAATTACGACTTTTCA",1,21.9,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3H L38K N107V P177Q",4
"lib2","SARS-CoV-2","AAATTACGCATGTAAG",14,212.52,10.83,-0.01,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTACGCTGCCAGT",6,201.87,8.93,-1.91,0.07,2.66,1.08,0,">1 nonsynonymous","S29A Y121L Q176M",3
"lib2","SARS-CoV-2","AAATTACGGCGTATAA",3,24.6,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G9W L95T V103K G146L",4
"lib2","SARS-CoV-2","AAATTACGGTAAAACC",2,33.48,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C49T Y123K I142S",3
"lib2","SARS-CoV-2","AAATTACTAAGCCTAC",18,359.56,10.65,-0.18,0.03,2.93,1.06,0,"1 nonsynonymous","S184M",1
"lib2","SARS-CoV-2","AAATTACTAATTGGTT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","C6* I104W P133A K199Q",4
"lib2","SARS-CoV-2","AAATTACTACGCTGAG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I A81S E141R P149F T201R",5
"lib2","SARS-CoV-2","AAATTACTGACCTTGA",10,135.88,9.99,-0.85,0.05,2.23,1.04,0,">1 nonsynonymous","D34N P54A Y91K",3
"lib2","SARS-CoV-2","AAATTACTTACGGAAT",14,196.03,8.75,-2.08,0.04,2.7,1.08,0,">1 nonsynonymous","I28V P54W Y119S F126L",4
"lib2","SARS-CoV-2","AAATTACTTGTGCATA",1,39.32,10.04,-0.79,0.06,2.91,1,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","AAATTACTTTCAAACG",2,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95S Y123I K132G",3
"lib2","SARS-CoV-2","AAATTAGAACTGTCAA",10,66.42,9.6,-1.24,0.08,1.79,1.06,0,">1 nonsynonymous","F44H W106K",2
"lib2","SARS-CoV-2","AAATTAGACATATTTA",4,39.57,10.82,-0.02,0.06,2.82,1.17,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","AAATTAGACTGAAACA",19,54.38,6.14,-4.69,0.58,1.5,1.18,0.01,">1 nonsynonymous","T3S F47E A89K",3
"lib2","SARS-CoV-2","AAATTAGAGGCACCTG",2,44.21,10.26,-0.57,0.06,2.88,1.03,0,">1 nonsynonymous","A14S F185L",2
"lib2","SARS-CoV-2","AAATTAGATACTATAC",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94W I104S P149H N171L",4
"lib2","SARS-CoV-2","AAATTAGATCACGACT",5,150.69,10.3,-0.53,0.03,2.92,1.06,0,">1 nonsynonymous","S45P N64S K114R",3
"lib2","SARS-CoV-2","AAATTAGCGCTATGCC",2,12.17,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","N130E I138K P161R",3
"lib2","SARS-CoV-2","AAATTAGCGGACATAG",7,46.2,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12L T63G G86F",3
"lib2","SARS-CoV-2","AAATTAGCTACAACTG",3,93.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8S Y39I Y119T F167V",4
"lib2","SARS-CoV-2","AAATTAGCTAGATGGT",6,22.46,6.08,-4.75,1.21,1.5,1.18,0.03,">1 nonsynonymous","F12V T63S I80Y I104V E135C",5
"lib2","SARS-CoV-2","AAATTAGCTTTCGGCT",5,255.27,10.54,-0.3,0.04,2.95,1.03,0,"1 nonsynonymous","T46A",1
"lib2","SARS-CoV-2","AAATTAGGAGGGTAAA",7,1.69,NA,NA,NA,NA,NA,NA,"stop","G9F A42Y K48* Y175*",4
"lib2","SARS-CoV-2","AAATTAGGCACAAGTA",4,29.07,10.85,0.01,0.06,3,1.03,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","AAATTAGGGGAGGATT",15,117.15,10.77,-0.06,0.06,2.92,1.07,0,"1 nonsynonymous","V32N",1
"lib2","SARS-CoV-2","AAATTAGTATTATGAA",13,53.01,10.1,-0.73,0.07,2.54,1.05,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","AAATTATACTGTTTGA",19,225.87,10.68,-0.16,0.03,2.9,1.07,0,"1 nonsynonymous","G116R",1
"lib2","SARS-CoV-2","AAATTATAGCTAAATA",15,19.91,6.01,-4.83,0.52,3,1.2,0.01,">1 nonsynonymous","D34L S45Y L57G P96S I142W",5
"lib2","SARS-CoV-2","AAATTATCAACTCCGT",6,102.77,10.84,0.01,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTATCACGAACAA",8,61.56,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S43N T55K G83Y T100A D137Q",5
"lib2","SARS-CoV-2","AAATTATCATACCCAC",4,92.47,10.84,0,0.05,2.99,1.02,0,"1 nonsynonymous","S45E",1
"lib2","SARS-CoV-2","AAATTATCCAATTTCA",3,114.6,10.62,-0.22,0.03,2.98,1.03,0,"1 nonsynonymous","T55C",1
"lib2","SARS-CoV-2","AAATTATCGCACCGTG",8,100.04,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","R16V P82A R124D S139F",4
"lib2","SARS-CoV-2","AAATTATCTACACATA",7,31.37,7.1,-3.74,0.37,1.5,1.15,0.03,">1 nonsynonymous","S19R T100E",2
"lib2","SARS-CoV-2","AAATTATGATATAACA",9,166.83,9.24,-1.6,0.06,2.75,1.1,0,">1 nonsynonymous","N24D A33M S53P A67T G174E",5
"lib2","SARS-CoV-2","AAATTATGATCATCAA",8,3.97,NA,NA,NA,NA,NA,NA,"stop","V11P D34L D97S S129*",4
"lib2","SARS-CoV-2","AAATTATGTTAGAATC",7,37.46,10.16,-0.67,0.11,1.98,1.07,0.01,">1 nonsynonymous","Y66D V71L",2
"lib2","SARS-CoV-2","AAATTATGTTCCCTGT",4,31.15,9.82,-1.02,0.07,3,1.02,0,">1 nonsynonymous","I2T A67V F126V",3
"lib2","SARS-CoV-2","AAATTATTAAAAAACG",13,196.42,8.92,-1.91,0.05,2.71,1.07,0,">1 nonsynonymous","E10K S41I K87S G116S",4
"lib2","SARS-CoV-2","AAATTATTAAGACGCC",5,64.4,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N24I A89T V115W Y121K T140D",5
"lib2","SARS-CoV-2","AAATTATTAATCCTTG",13,54.2,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","T3N S19R F44E D137H Q144S G174F",6
"lib2","SARS-CoV-2","AAATTATTACAATATC",3,36.19,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","AAATTATTACATAATA",10,99.06,6,-4.84,0.88,1.5,1.1,0,">1 nonsynonymous","V37K T63S S108F G116R",4
"lib2","SARS-CoV-2","AAATTATTACCGATAA",3,106.43,10.76,-0.07,0.03,2.97,1.05,0,"1 nonsynonymous","P7A",1
"lib2","SARS-CoV-2","AAATTATTATTACTGC",2,50.19,10.48,-0.36,0.06,2.9,1.07,0,">1 nonsynonymous","Y91C T201M",2
"lib2","SARS-CoV-2","AAATTATTATTTATAT",4,38.65,10.8,-0.04,0.07,2.8,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTATTCAATGCTA",7,40.75,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","N4L T46Q V103R K128S",4
"lib2","SARS-CoV-2","AAATTATTCTAAGATT",10,28.63,6,-4.84,1.88,1.5,1.19,0.01,">1 nonsynonymous","R124T Q168M",2
"lib2","SARS-CoV-2","AAATTATTTTCAGCAC",1,21.38,6.23,-4.61,0.77,1.5,1.07,0.03,">1 nonsynonymous","A22E S45G N64Q G74K G86T N110Y F160D",7
"lib2","SARS-CoV-2","AAATTCAAAGGCTACG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAATTCAAATGAATGA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","C61R G146W N157*",3
"lib2","SARS-CoV-2","AAATTCAACGTTTAAT",1,59.7,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D59P C158M",2
"lib2","SARS-CoV-2","AAATTCAACTCCAACA",7,246.19,7.18,-3.66,0.26,1.5,1.09,0.01,">1 nonsynonymous","D75N D97A F160S Q176R",4
"lib2","SARS-CoV-2","AAATTCAAGTGATCCT",8,88.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V11F S45L Y91T F126K",4
"lib2","SARS-CoV-2","AAATTCAATGAACTCA",4,50.87,8.75,-2.08,0.15,1.7,1.21,0.01,">1 nonsynonymous","F12Y A33S L57W P197I",4
"lib2","SARS-CoV-2","AAATTCAATTAAGACG",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M F62A C102N S139T Q163V T170H",6
"lib2","SARS-CoV-2","AAATTCAATTACCCCC",3,3.06,NA,NA,NA,NA,NA,NA,"stop","T55* D98T F126T",3
"lib2","SARS-CoV-2","AAATTCACAGTATTCC",2,15.83,10.56,-0.27,0.17,2.58,1.37,0.01,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","AAATTCACCACAAAAA",3,37.08,10.07,-0.76,0.1,2.45,1.01,0,">1 nonsynonymous","P54G I104T",2
"lib2","SARS-CoV-2","AAATTCACCATCCTCA",1,10.67,10.02,-0.82,0.06,3,1,0,"1 nonsynonymous","L125S",1
"lib2","SARS-CoV-2","AAATTCACCATTTGCC",2,0.99,NA,NA,NA,NA,NA,NA,"stop","R73* W106A S147N",3
"lib2","SARS-CoV-2","AAATTCACCTATGCAT",4,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S N58S Y121Q",3
"lib2","SARS-CoV-2","AAATTCACCTGATCTG",2,24.42,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","N92V K199G",2
"lib2","SARS-CoV-2","AAATTCACGCATAATG",23,371.51,6,-4.84,2,1.5,1.13,0,"1 nonsynonymous","P177H",1
"lib2","SARS-CoV-2","AAATTCAGAAGAGGAT",8,101.9,10.73,-0.11,0.05,2.88,1.14,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","AAATTCAGACAGTCTA",9,99.71,10.74,-0.09,0.06,2.89,1.13,0,"1 nonsynonymous","K26M",1
"lib2","SARS-CoV-2","AAATTCAGACCTCCAA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","S45I G166*",2
"lib2","SARS-CoV-2","AAATTCAGAGAAATGT",6,97.91,10.89,0.05,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTCAGCACTGTAG",6,2.59,NA,NA,NA,NA,NA,NA,"stop","P7* S41E I104T P177Y",4
"lib2","SARS-CoV-2","AAATTCAGCCGTATAT",3,21.83,10.3,-0.54,0.09,2.49,1.12,0,">1 nonsynonymous","R16L Y39D I142M",3
"lib2","SARS-CoV-2","AAATTCAGGATGACAT",2,50.43,10.78,-0.06,0.1,2.78,1.08,0.01,"1 nonsynonymous","Y66N",1
"lib2","SARS-CoV-2","AAATTCAGTAGCGCAA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","C49* N120V L125* F167S V180Y",5
"lib2","SARS-CoV-2","AAATTCAGTCACCGAA",4,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K P7S A33T P82A D98T F185S",6
"lib2","SARS-CoV-2","AAATTCCAAAACCAAG",8,104.31,9,-1.84,0.09,1.61,1.06,0,">1 nonsynonymous","Q84H P96C K198G",3
"lib2","SARS-CoV-2","AAATTCCAATAAACCG",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R W23Q K56R F99W K199R",5
"lib2","SARS-CoV-2","AAATTCCAGGGCCCAA",2,54.71,10.75,-0.09,0.05,2.9,1.12,0,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","AAATTCCATCAACTTA",3,21.21,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","Q84I W106A Y123G",3
"lib2","SARS-CoV-2","AAATTCCATTTATTGG",11,128.41,8.91,-1.93,0.13,1.7,1.09,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","AAATTCCCACATATGA",1,36.47,10.87,0.03,0.06,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTCCCAGAGTATG",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G G83E Y91G Y165M A190D T201Y",6
"lib2","SARS-CoV-2","AAATTCCCCCGTACTT",8,40.55,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F12E G101W L125T G152K",4
"lib2","SARS-CoV-2","AAATTCCCCTAAATAT",3,20.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P T63I F70D",3
"lib2","SARS-CoV-2","AAATTCCCGAGGATAT",15,390.29,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L5E P177N",2
"lib2","SARS-CoV-2","AAATTCCGTTTCTACA",8,106.42,10.79,-0.05,0.04,2.96,1.05,0,">1 nonsynonymous","V37L T148V",2
"lib2","SARS-CoV-2","AAATTCCTGGGTGTAA",6,18.58,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","S45Y Q84V N92L T201S",4
"lib2","SARS-CoV-2","AAATTCGAATCCTCAT",2,14.48,7.79,-3.05,0.31,1.51,1.21,0.05,">1 nonsynonymous","N40Y K128F P161A",3
"lib2","SARS-CoV-2","AAATTCGAATCGTTCA",1,9.56,6,-4.84,2,3,1.24,0.03,">1 nonsynonymous","A33Q A42N P82I N107F",4
"lib2","SARS-CoV-2","AAATTCGAATTTAATA",4,20.65,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V20E V52Y L60S Y143C",4
"lib2","SARS-CoV-2","AAATTCGACAGGTGGC",4,22.31,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y91P T100R F156R",3
"lib2","SARS-CoV-2","AAATTCGACTCAGTTA",1,20.72,10.91,0.07,0.07,2.91,1.09,0,">1 nonsynonymous","L5H T193N",2
"lib2","SARS-CoV-2","AAATTCGAGTGCCTAA",3,40.79,9.24,-1.6,0.11,1.93,1.02,0.01,">1 nonsynonymous","V77A D98S",2
"lib2","SARS-CoV-2","AAATTCGATTTATCGC",9,76.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E135M P149A N157C",3
"lib2","SARS-CoV-2","AAATTCGCCTTAACAA",12,107.15,10.85,0.01,0.05,2.9,1.09,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","AAATTCGCTCCTCCAT",6,45,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6V K94F A145K S184E",4
"lib2","SARS-CoV-2","AAATTCGCTGTCGCGA",2,17.61,9.07,-1.76,0.34,1.76,1.14,0.05,">1 nonsynonymous","L95F Q163T",2
"lib2","SARS-CoV-2","AAATTCGGACTAACTA",3,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L T100Y R127G G146M",4
"lib2","SARS-CoV-2","AAATTCGGTCTTAATC",7,46.93,9.21,-1.62,0.06,2.86,1.12,0,"1 nonsynonymous","G155P",1
"lib2","SARS-CoV-2","AAATTCGTATATAACC",7,48,6.72,-4.12,0.55,1.5,1.12,0.05,">1 nonsynonymous","I88N Y121K",2
"lib2","SARS-CoV-2","AAATTCGTATCATGCA",9,85.02,8.92,-1.92,0.1,1.96,1.08,0,">1 nonsynonymous","C61L W106R G174R",3
"lib2","SARS-CoV-2","AAATTCGTCAATCCAA",2,28.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37S N58W P82Q R127V",4
"lib2","SARS-CoV-2","AAATTCGTTATCCTAA",5,96.6,9.4,-1.43,0.07,1.98,1.04,0,">1 nonsynonymous","C6W W106Y",2
"lib2","SARS-CoV-2","AAATTCTAACAAATCG",6,71.8,9.97,-0.86,0.05,2.69,1.06,0,">1 nonsynonymous","S19H S41E D98E S113A L122K S129L Q168A",7
"lib2","SARS-CoV-2","AAATTCTACTTATGGG",2,133.53,10.06,-0.78,0.04,2.88,1.05,0,">1 nonsynonymous","C61Y L122T F160D P169T",4
"lib2","SARS-CoV-2","AAATTCTAGAAAGGTT",2,0.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","AAATTCTATATCAGCG",6,12.64,6.1,-4.73,1.61,1.5,1.13,0.03,">1 nonsynonymous","D90W P96L A105P E135S",4
"lib2","SARS-CoV-2","AAATTCTATGACTTCA",1,41.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37N C49M P96I",3
"lib2","SARS-CoV-2","AAATTCTCAAAATATA",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A V37L V52Y Y91I G174E",5
"lib2","SARS-CoV-2","AAATTCTCTATAGGCA",7,208.8,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T15I V37R I88L L95M F126T C150S Q176Y",7
"lib2","SARS-CoV-2","AAATTCTGAAAGACGC",10,51.88,7.59,-3.24,0.19,1.54,1.09,0.01,">1 nonsynonymous","N120H S139P",2
"lib2","SARS-CoV-2","AAATTCTGATATTCAA",6,46.06,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","F70E T201M",2
"lib2","SARS-CoV-2","AAATTCTGCAAATAGT",4,74.59,10.73,-0.11,0.05,3,1.03,0,">1 nonsynonymous","R16L Y35I C61E Q84M S129D",5
"lib2","SARS-CoV-2","AAATTCTGTAATTAAA",10,86.74,7.87,-2.96,0.23,1.5,1.1,0.02,">1 nonsynonymous","C6Y F134N Q168L",3
"lib2","SARS-CoV-2","AAATTCTGTATTTATA",9,147.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18P Y66D D90W F126P T201G",5
"lib2","SARS-CoV-2","AAATTCTGTCGTCGGC",11,289.11,10.71,-0.13,0.04,2.91,1.08,0,">1 nonsynonymous","T85G T201A",2
"lib2","SARS-CoV-2","AAATTCTTAACATACG",3,21.76,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99R T201N",2
"lib2","SARS-CoV-2","AAATTCTTATACGCTA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","P7* N13C V32F K132L",4
"lib2","SARS-CoV-2","AAATTCTTCACAAACC",5,69.57,10.77,-0.07,0.07,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTCTTCACACACT",6,133.06,10.45,-0.38,0.04,2.89,1.02,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","AAATTCTTCATGGATT",2,53.86,10.72,-0.12,0.04,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTCTTGACCAAAG",5,3.11,NA,NA,NA,NA,NA,NA,"stop","Y39M Y123*",2
"lib2","SARS-CoV-2","AAATTCTTGCCGCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50* Y165Q",2
"lib2","SARS-CoV-2","AAATTGAAAATTTACC",2,59.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107R P177L",2
"lib2","SARS-CoV-2","AAATTGAACCCTTATA",3,23.88,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","R124S L162Y",2
"lib2","SARS-CoV-2","AAATTGAAGGCGCGTA",5,121.82,10.81,-0.02,0.03,2.99,1.03,0,"1 nonsynonymous","V173Y",1
"lib2","SARS-CoV-2","AAATTGAATATTACGG",1,12.86,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","V20M K26E Y50H F134M S147C G174V",6
"lib2","SARS-CoV-2","AAATTGAATCTTCATG",1,7.07,10.79,-0.05,0.14,2.79,1.19,0.01,">1 nonsynonymous","E10A G83K",2
"lib2","SARS-CoV-2","AAATTGAATTCAAGAG",5,7.33,8.77,-2.06,0.36,2.09,1.2,0.02,">1 nonsynonymous","T15F W106R",2
"lib2","SARS-CoV-2","AAATTGACAAAAGGTT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","F99* I104L F134G N171I",4
"lib2","SARS-CoV-2","AAATTGACATACATGA",3,49.3,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K94T G155T",2
"lib2","SARS-CoV-2","AAATTGACTCCATGTA",9,59.44,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L95H S129R I142T",3
"lib2","SARS-CoV-2","AAATTGACTCTACTAA",2,5.13,6.93,-3.9,2,3,1.02,0,">1 nonsynonymous","K48R T63M F99S V182A",4
"lib2","SARS-CoV-2","AAATTGAGAATGACAA",4,19.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84H K94Y",2
"lib2","SARS-CoV-2","AAATTGAGACAGAGTA",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A C61R D97Y R124M V173A E186I",6
"lib2","SARS-CoV-2","AAATTGAGCTTCTAGG",2,14.26,9.74,-1.1,0.14,2.11,1.06,0.01,">1 nonsynonymous","K48W C61W",2
"lib2","SARS-CoV-2","AAATTGAGTACAATTT",10,72.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12K N92F Y119T I142N A190S K198L",6
"lib2","SARS-CoV-2","AAATTGAGTTTGACTT",4,46.7,10.6,-0.23,0.06,2.87,1.06,0,">1 nonsynonymous","T148S P191L",2
"lib2","SARS-CoV-2","AAATTGATAACGGGGC",4,27.47,6,-4.84,2,2.67,1.12,0,">1 nonsynonymous","N1R I88S I138P",3
"lib2","SARS-CoV-2","AAATTGATCAGACGTA",2,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V T46K T100E S108H P191K",5
"lib2","SARS-CoV-2","AAATTGATGAGTGAAG",4,91.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9N C61N Y93P A105Y C150A",5
"lib2","SARS-CoV-2","AAATTGATTTATTGGA",12,213.68,10.76,-0.07,0.02,2.95,1.07,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","AAATTGATTTGACTAG",8,86.91,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","N13E F44K Y66T C150A T201K",5
"lib2","SARS-CoV-2","AAATTGCAAACGCTGC",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73A D97W N110V R124H",4
"lib2","SARS-CoV-2","AAATTGCAAAGGGTCG",12,128.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N58S S129L G152I Y175V C195R",5
"lib2","SARS-CoV-2","AAATTGCAAATATTTA",4,14.84,7.46,-3.38,0.39,1.5,1.27,0.05,">1 nonsynonymous","T3L L60A K114W Q176C",4
"lib2","SARS-CoV-2","AAATTGCGAAAACAAG",4,44.22,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V20A C49L",2
"lib2","SARS-CoV-2","AAATTGCGCTCACACA",13,1.75,NA,NA,NA,NA,NA,NA,"stop","Y39* W106T P133W",3
"lib2","SARS-CoV-2","AAATTGCTAAAAGGAA",4,50.69,10.59,-0.24,0.04,2.99,1.02,0,"1 nonsynonymous","F99W",1
"lib2","SARS-CoV-2","AAATTGGATTGATAAC",1,20.21,8.77,-2.07,0.24,1.97,1.15,0.03,">1 nonsynonymous","A42C D112L",2
"lib2","SARS-CoV-2","AAATTGGCACTGACAA",1,16.85,10.9,0.07,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTGGTAAAATCTG",1,5.88,6,-4.84,2,1.5,1.04,0.04,">1 nonsynonymous","F12C K48S G152H G174R",4
"lib2","SARS-CoV-2","AAATTGTAAAACAACC",9,100.2,9.03,-1.81,0.05,2.47,1.11,0,">1 nonsynonymous","T55L I142A Q163W",3
"lib2","SARS-CoV-2","AAATTGTAAAGTCGAG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","L38* F167V G196D",3
"lib2","SARS-CoV-2","AAATTGTACAATCTAG",1,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44A R179T S184R",3
"lib2","SARS-CoV-2","AAATTGTACAGGTAGA",16,632.85,10.14,-0.7,0.04,2.74,1.04,0,">1 nonsynonymous","N64R Y178S",2
"lib2","SARS-CoV-2","AAATTGTACCTCTGAC",3,25.22,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","R73A Y93N D112K N171R Y175Q",5
"lib2","SARS-CoV-2","AAATTGTACGCCTTGT",4,33.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6Y A89E C195F",3
"lib2","SARS-CoV-2","AAATTGTACGGCTCAT",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K I104N S147Y L183Q",4
"lib2","SARS-CoV-2","AAATTGTATAATTAGA",7,75.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V77P Y93G R124L G146K C158L",5
"lib2","SARS-CoV-2","AAATTGTTAAATATAG",2,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R C158G",2
"lib2","SARS-CoV-2","AAATTGTTCACGTGAT",4,3.9,NA,NA,NA,NA,NA,NA,"stop","Y39* P96I K132I",3
"lib2","SARS-CoV-2","AAATTTAAAAAATGGT",6,114.32,10.87,0.03,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTTAAAAATAACT",12,3.76,NA,NA,NA,NA,NA,NA,"stop","P7S V37* S129L",3
"lib2","SARS-CoV-2","AAATTTAAAAATACTG",21,6.46,NA,NA,NA,NA,NA,NA,"stop","D34R T85P Y143* P149H",4
"lib2","SARS-CoV-2","AAATTTAAAAATTAAG",7,74.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S A81L L122P",3
"lib2","SARS-CoV-2","AAATTTAAAAGCTTAT",3,41.94,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I2L F12T A22G S45T P82S S113T Y159L",7
"lib2","SARS-CoV-2","AAATTTAAACCTGCGT",7,55.65,8.8,-2.03,0.2,1.78,1.12,0.01,">1 nonsynonymous","C6M N24F",2
"lib2","SARS-CoV-2","AAATTTAACCCCTCCC",10,167.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35A K56M A105L N157Q",4
"lib2","SARS-CoV-2","AAATTTAACGATGTTT",13,188.69,10.63,-0.21,0.04,2.89,1.09,0,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","AAATTTAAGACCAGAT",11,161.54,6,-4.84,2,3,1.2,0,">1 nonsynonymous","R25G Y35C C61T I72S Y91T N120Q G152I",7
"lib2","SARS-CoV-2","AAATTTAAGTGGATTG",2,14.33,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","R124F P149G N157K P191S",4
"lib2","SARS-CoV-2","AAATTTAATGAACGTA",12,177.5,9.47,-1.37,0.04,2.61,1.08,0,">1 nonsynonymous","K56F D98T L131I G155D",4
"lib2","SARS-CoV-2","AAATTTACACGTCTAT",18,392.9,10.47,-0.37,0.03,2.94,1.03,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","AAATTTACCAACAAGA",7,147.26,10.63,-0.21,0.03,2.94,1.05,0,">1 nonsynonymous","A105S E154G",2
"lib2","SARS-CoV-2","AAATTTACCTAGGGAA",9,133.1,10.87,0.04,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTTACTCAGATAA",12,107.72,6.23,-4.61,0.67,1.5,1.23,0.02,">1 nonsynonymous","V77T D112G",2
"lib2","SARS-CoV-2","AAATTTAGAAACTTGG",4,104.66,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V52F E141G C150L P177S",4
"lib2","SARS-CoV-2","AAATTTAGATACACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* T85V",2
"lib2","SARS-CoV-2","AAATTTAGATGAATAA",6,172.9,7.86,-2.98,0.18,1.55,1.14,0.01,">1 nonsynonymous","N107L Y119Q T201K",3
"lib2","SARS-CoV-2","AAATTTAGCTTGCACT",14,256.31,10.63,-0.21,0.03,2.94,1.04,0,">1 nonsynonymous","Y39T P149W",2
"lib2","SARS-CoV-2","AAATTTATAGCAAGGT",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V L57D G83F K94V D137V",5
"lib2","SARS-CoV-2","AAATTTATAGCATTTC",4,75.25,10.84,0,0.06,2.95,1.05,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","AAATTTATAGTACAGA",3,25.36,7.47,-3.36,0.14,1.69,1.06,0,">1 nonsynonymous","D98I N151L Y159P",3
"lib2","SARS-CoV-2","AAATTTATCGAAATTC",8,68.08,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","Y50T D90T L122V Y178R",4
"lib2","SARS-CoV-2","AAATTTATCGTGCCAT",15,66.36,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","T3R F8V S43G G83S I142S T170N",6
"lib2","SARS-CoV-2","AAATTTATGAACCCTT",4,0.37,NA,NA,NA,NA,NA,NA,"stop","S41G I80M P169F Y178*",4
"lib2","SARS-CoV-2","AAATTTATTTACACAA",5,12.38,6.47,-4.37,0.84,3,1.12,0.01,">1 nonsynonymous","P54S C61F E141V Q176S",4
"lib2","SARS-CoV-2","AAATTTATTTTAAATG",3,13.51,7.92,-2.92,0.17,1.57,1.15,0.02,"1 nonsynonymous","W23G",1
"lib2","SARS-CoV-2","AAATTTCAAAGGTATG",3,15.73,9.86,-0.98,0.11,2.39,1.09,0.01,">1 nonsynonymous","L38A S200G",2
"lib2","SARS-CoV-2","AAATTTCAGAGCATAA",1,83.44,10.86,0.02,0.06,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTTCATGATATGT",1,0.5,NA,NA,NA,NA,NA,NA,"stop","A22E A67V L95* T100*",4
"lib2","SARS-CoV-2","AAATTTCATGCAGACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N30S C61E E76F Y91W W106*",5
"lib2","SARS-CoV-2","AAATTTCCACAGCGGA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","T15* I28M T148L",3
"lib2","SARS-CoV-2","AAATTTCCACTTCACA",5,53.84,10.9,0.07,0.07,2.83,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTTCCATTGGTGC",2,96.35,10.86,0.03,0.02,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTTCCCAACGTGG",5,1.83,NA,NA,NA,NA,NA,NA,"stop","G83W L95T L122* Q176C C195F",5
"lib2","SARS-CoV-2","AAATTTCCCCGGTACG",1,8.78,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","I2C Y39S E135S Q144T G172V",5
"lib2","SARS-CoV-2","AAATTTCCCGGGCAAA",5,6.27,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I104N T170E",2
"lib2","SARS-CoV-2","AAATTTCCCTATCACC",3,43.91,7.77,-3.07,0.29,1.5,1.04,0.03,">1 nonsynonymous","L131Q Q163C",2
"lib2","SARS-CoV-2","AAATTTCCTATGTTAA",9,65.45,10.45,-0.39,0.06,2.81,1.09,0,">1 nonsynonymous","I2L P54S A105T T201Y",4
"lib2","SARS-CoV-2","AAATTTCCTGGTGGAT",4,14.72,10.62,-0.22,0.14,2.79,1.01,0.01,">1 nonsynonymous","K56I D97S",2
"lib2","SARS-CoV-2","AAATTTCGAACAGTGT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98M N118P P169M",3
"lib2","SARS-CoV-2","AAATTTCTAAAATCAT",7,109.32,10.88,0.04,0.06,3,1.02,0,"1 nonsynonymous","V173Y",1
"lib2","SARS-CoV-2","AAATTTCTATATACAG",2,26.44,10.32,-0.51,0.12,2.86,1.13,0,">1 nonsynonymous","D98C T148N",2
"lib2","SARS-CoV-2","AAATTTCTCAAAATTA",3,52.29,10.59,-0.25,0.06,2.89,1.12,0,"1 nonsynonymous","G174A",1
"lib2","SARS-CoV-2","AAATTTCTCATTAGCT",2,13.81,6,-4.84,2,3,1.22,0.03,"1 nonsynonymous","V71R",1
"lib2","SARS-CoV-2","AAATTTCTTAAATAGT",3,113.95,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N40I Q176T",2
"lib2","SARS-CoV-2","AAATTTGAACAATGAT",6,39.35,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","R16C S41L D98S D137L",4
"lib2","SARS-CoV-2","AAATTTGAACCTAACG",6,40.71,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A89Y K114R T140Y Y178K T201S",5
"lib2","SARS-CoV-2","AAATTTGAAGGTAATA",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C K26S S113L N171I T201S",5
"lib2","SARS-CoV-2","AAATTTGATCCAAGAT",7,144.75,10.14,-0.69,0.04,2.9,1.06,0,">1 nonsynonymous","L5S E154L",2
"lib2","SARS-CoV-2","AAATTTGATTTTAAGC",4,6.25,8,-2.84,0.25,3,1.17,0.01,">1 nonsynonymous","A42K C49R T100M C158S L183R P191F",6
"lib2","SARS-CoV-2","AAATTTGCACAAAAGT",1,18.26,7.7,-3.13,0.21,1.5,1.06,0.02,">1 nonsynonymous","V11N R136Y",2
"lib2","SARS-CoV-2","AAATTTGCATTAACTG",10,279.57,10.84,0.01,0.03,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTTGCGCGCCCAC",12,248.37,10.71,-0.12,0.03,2.93,1.06,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","AAATTTGCGTGACATC",5,44.66,10.15,-0.69,0.12,2,1.04,0.01,">1 nonsynonymous","I104S Y123M",2
"lib2","SARS-CoV-2","AAATTTGCTGCCAAAG",2,4.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157E",1
"lib2","SARS-CoV-2","AAATTTGGAACACATG",8,29.56,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C31L Y93S I138Y",3
"lib2","SARS-CoV-2","AAATTTGGAATGTAAA",1,21.04,10.9,0.06,0.05,2.94,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTTGGAGATCCCT",5,142.92,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D90T N120T N157S",3
"lib2","SARS-CoV-2","AAATTTGGATCAATTC",6,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K N64V Y93T V103I Y119G E135S",6
"lib2","SARS-CoV-2","AAATTTGGGCCAATAC",12,608.61,9.9,-0.93,0.06,2.36,1.01,0,">1 nonsynonymous","Q79K D97Y P191D",3
"lib2","SARS-CoV-2","AAATTTGGTTTATCAA",2,23.19,9.15,-1.69,0.28,1.5,1.08,0.04,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","AAATTTGTAAAAAATG",4,21.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5T R27V A81S W106S P149L",5
"lib2","SARS-CoV-2","AAATTTGTAAACCATT",4,38.79,9.3,-1.54,0.17,1.88,1.04,0.01,">1 nonsynonymous","V20S V37H P149L",3
"lib2","SARS-CoV-2","AAATTTGTAAGACCTT",29,448.47,10.43,-0.41,0.03,2.85,1.08,0,">1 nonsynonymous","E76D S184L",2
"lib2","SARS-CoV-2","AAATTTGTACAATGGC",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P A14P F17L G83Y F99S N118K",6
"lib2","SARS-CoV-2","AAATTTGTTAAGGTAA",2,63.34,10.78,-0.06,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAATTTTACAACGTAA",4,19.79,7.36,-3.48,0.44,1.5,1.17,0.07,">1 nonsynonymous","N1Q A14G N40T F99I K128E G174S",6
"lib2","SARS-CoV-2","AAATTTTACAGGAGTA",2,26.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I88Y Y121V L131R T201S",4
"lib2","SARS-CoV-2","AAATTTTAGTACCTTA",2,33.49,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D68M V71I N107A P149M F160I",5
"lib2","SARS-CoV-2","AAATTTTCACTATCCG",1,10.38,10.77,-0.07,0.07,2.98,1.04,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","AAATTTTCAGAAATTT",2,45.64,10.89,0.06,0.08,2.93,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAATTTTCTAATAGGC",5,75.56,10.78,-0.06,0.05,2.84,1.11,0,">1 nonsynonymous","Y123F I138G",2
"lib2","SARS-CoV-2","AAATTTTGGTTCGATA",5,70.03,10.67,-0.17,0.04,2.93,1.07,0,">1 nonsynonymous","L5R S45N",2
"lib2","SARS-CoV-2","AAATTTTGTGTGCCTT",7,148.81,10.82,-0.01,0.06,2.91,1.03,0,">1 nonsynonymous","T63S D90N",2
"lib2","SARS-CoV-2","AAATTTTGTTATACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H C49S",2
"lib2","SARS-CoV-2","AAATTTTTACATTCAA",1,39.93,10.92,0.09,0.04,3,1.01,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","AAATTTTTCGCTCCCA",3,55.51,7.48,-3.36,0.3,1.5,1.16,0.02,">1 nonsynonymous","Y143G Y175W P191L",3
"lib2","SARS-CoV-2","AAATTTTTGTTAACAA",5,60.71,10.84,0.01,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAAAAAAAACAGC",3,47.49,10.11,-0.72,0.07,2.79,1.05,0,">1 nonsynonymous","N58S N120I P149L",3
"lib2","SARS-CoV-2","AACAAAAAAATAGCTG",2,5.54,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","E10F S113Q Y121S",3
"lib2","SARS-CoV-2","AACAAAAAAATCAAAC",2,27.2,10.97,0.13,0.09,2.83,1.17,0,">1 nonsynonymous","Q84S N130K",2
"lib2","SARS-CoV-2","AACAAAAAACGGGGAA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","A67S Y143K V180* T201R",4
"lib2","SARS-CoV-2","AACAAAAAATAAAATG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","R16M A33* F156H",3
"lib2","SARS-CoV-2","AACAAAAAATTTCTAC",1,20.84,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S36G D68K P82V D90S",4
"lib2","SARS-CoV-2","AACAAAAACAAATTTA",6,0.26,NA,NA,NA,NA,NA,NA,"stop","D34M S43* L95W R127V E154Q A192P",6
"lib2","SARS-CoV-2","AACAAAAACAACATAC",8,89.01,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I28T C61R R124S F156I",4
"lib2","SARS-CoV-2","AACAAAAACAGTTTGT",4,38.81,6.84,-4,0.15,1.5,1.05,0,">1 nonsynonymous","S113W F134M T148S",3
"lib2","SARS-CoV-2","AACAAAAACATTCGCT",7,60.08,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14L D90K D97A L125A G172Y",5
"lib2","SARS-CoV-2","AACAAAAACCTCTAAA",5,88.37,10.82,-0.01,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAAAAGATAAACT",5,16.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C49R D112V",2
"lib2","SARS-CoV-2","AACAAAAAGTACAACA",3,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V R127C L183K",3
"lib2","SARS-CoV-2","AACAAAAAGTTTTATT",8,63.05,6.66,-4.18,0.26,1.5,1.18,0.01,">1 nonsynonymous","A22S T100P",2
"lib2","SARS-CoV-2","AACAAAAATCTCGCAA",6,102.87,8.38,-2.46,0.13,1.75,1.11,0.01,">1 nonsynonymous","T55Y P133M E141L Y178T",4
"lib2","SARS-CoV-2","AACAAAAATGAGAAAG",1,11.02,10.59,-0.25,0.13,2.98,1,0.01,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","AACAAAAATGATTACG",2,9.98,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1S F44I C49L D59F G86D",5
"lib2","SARS-CoV-2","AACAAAAATTCATGAA",2,3.85,NA,NA,NA,NA,NA,NA,"stop","V11* L122Q",2
"lib2","SARS-CoV-2","AACAAAAATTCTCACG",11,89.05,8.14,-2.7,0.28,1.5,1.02,0.03,">1 nonsynonymous","L38Q K48A S184L",3
"lib2","SARS-CoV-2","AACAAAACAAAGATTA",9,20.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C6Y A42I D98E S113F G155Y",5
"lib2","SARS-CoV-2","AACAAAACAAGAAGGA",4,53.13,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N58L N64H A89T G117L",4
"lib2","SARS-CoV-2","AACAAAACAGAATATT",7,100.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50T D90C D137S T201C",4
"lib2","SARS-CoV-2","AACAAAACCGTTATGA",8,38.69,7.16,-3.67,0.42,1.5,1.01,0.03,">1 nonsynonymous","A81T K94M T140S",3
"lib2","SARS-CoV-2","AACAAAACGAGTAGAT",4,120.66,9.01,-1.82,0.07,2.86,1.15,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","AACAAAACGCATAATT",7,170.92,10.66,-0.17,0.03,2.94,1.07,0,">1 nonsynonymous","S41G D59S",2
"lib2","SARS-CoV-2","AACAAAACTACTTTTC",2,22.82,10.06,-0.78,0.17,1.89,1.12,0.01,">1 nonsynonymous","A89M T148Q",2
"lib2","SARS-CoV-2","AACAAAACTAGTTGAA",10,43.44,8.3,-2.53,0.35,1.5,1.03,0.06,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","AACAAAACTCACCATA",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y F47N N120R S129R G155M",5
"lib2","SARS-CoV-2","AACAAAACTCATGGCA",3,7.08,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","N1H S43F A105K T148Y",4
"lib2","SARS-CoV-2","AACAAAACTCCACACA",2,13.86,10.32,-0.52,0.38,2.36,1.18,0.05,"wildtype","",0
"lib2","SARS-CoV-2","AACAAAACTTACTTAA",7,49.84,8.32,-2.51,0.18,1.98,1.12,0.01,">1 nonsynonymous","N4L L60R R73M T170S",4
"lib2","SARS-CoV-2","AACAAAACTTATATGC",2,39.98,8.53,-2.31,0.09,2.49,1.05,0,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","AACAAAACTTCGGAGT",2,30.77,8.16,-2.67,0.31,1.67,1.3,0.02,">1 nonsynonymous","N107V Q163N",2
"lib2","SARS-CoV-2","AACAAAAGAACAGAAA",3,64.77,8.59,-2.25,0.07,2.76,1.03,0,">1 nonsynonymous","N1G T55P G117H",3
"lib2","SARS-CoV-2","AACAAAAGACATAAAC",5,66,8.61,-2.22,0.1,2.92,1.07,0,">1 nonsynonymous","C61K S113N",2
"lib2","SARS-CoV-2","AACAAAAGAGGTGGGG",8,74.42,6.21,-4.62,0.49,1.5,1.21,0.01,">1 nonsynonymous","K87E Y123E S139V G146T Y159S",5
"lib2","SARS-CoV-2","AACAAAAGATCAACTA",4,31.45,6,-4.84,0.82,1.84,1.13,0.01,">1 nonsynonymous","N157I Y175T",2
"lib2","SARS-CoV-2","AACAAAAGGAGTTTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107P S139R Q168S V173K V182S",5
"lib2","SARS-CoV-2","AACAAAAGTAGACTAA",6,98.59,9.94,-0.9,0.09,2.12,1.06,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","AACAAAAGTTCCTTAA",3,25.79,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S69K D98T S139L",3
"lib2","SARS-CoV-2","AACAAAATAACATGTG",3,2.22,NA,NA,NA,NA,NA,NA,"stop","Y91R G116F Y123T Q168*",4
"lib2","SARS-CoV-2","AACAAAATAATCAAAA",10,97.13,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","A105H N130D Y175L P191S",4
"lib2","SARS-CoV-2","AACAAAATATTGCGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T S69D D90L T100H",4
"lib2","SARS-CoV-2","AACAAAATGCAGCAGT",7,63.15,9.84,-0.99,0.06,2.73,1.02,0,">1 nonsynonymous","T15V G116L K199E",3
"lib2","SARS-CoV-2","AACAAAATTATTGCTT",7,124.24,10.69,-0.14,0.04,2.91,1.09,0,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","AACAAAATTCTCTAAC",6,238.18,10.18,-0.66,0.04,2.64,1.05,0,">1 nonsynonymous","Y39R G51T",2
"lib2","SARS-CoV-2","AACAAACAAAACCGGT",11,130.9,10.87,0.04,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAACAAATTGTTG",5,61.61,6,-4.84,1.03,1.5,1.17,0.01,">1 nonsynonymous","F17L F44Q G74D G83H G116W N171T Y175L",7
"lib2","SARS-CoV-2","AACAAACACACGCGCA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M V65L",2
"lib2","SARS-CoV-2","AACAAACACTGCATTT",13,0.91,NA,NA,NA,NA,NA,NA,"stop","L38S S43* A81T F134Y V173Y V182P",6
"lib2","SARS-CoV-2","AACAAACACTTAGGCT",5,150.74,10.32,-0.51,0.03,2.87,1.07,0,">1 nonsynonymous","N107S T201R",2
"lib2","SARS-CoV-2","AACAAACAGTTCGAAG",3,75.23,10.77,-0.06,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAACATAACGGCA",1,11.85,9.98,-0.85,0.12,2.94,1,0,">1 nonsynonymous","D59C T148P",2
"lib2","SARS-CoV-2","AACAAACCACTGATAA",3,9.53,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","AACAAACCATCATCAT",5,72.48,9.17,-1.66,0.05,2.92,1.08,0,">1 nonsynonymous","I2G D97S T170L",3
"lib2","SARS-CoV-2","AACAAACCCAGCTAAC",3,42.55,9.62,-1.21,0.08,2.55,1.05,0,">1 nonsynonymous","V37M T63M N107S",3
"lib2","SARS-CoV-2","AACAAACCCGATCCTA",2,118.08,9.69,-1.15,0.04,2.82,1.05,0,">1 nonsynonymous","D98S Y143L",2
"lib2","SARS-CoV-2","AACAAACCCTTCAAAG",2,63,10.59,-0.24,0.07,2.94,1.04,0,">1 nonsynonymous","I28F K56W Y91L",3
"lib2","SARS-CoV-2","AACAAACGCACACCGC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","P7N P96*",2
"lib2","SARS-CoV-2","AACAAACGCCCTAAAA",7,80.82,10.7,-0.14,0.04,2.98,1,0,">1 nonsynonymous","A33V T201S",2
"lib2","SARS-CoV-2","AACAAACGGGGTCACC",1,19.03,10.33,-0.51,0.06,2.86,1.09,0,">1 nonsynonymous","N30S T100M I104V",3
"lib2","SARS-CoV-2","AACAAACTAAATTGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","AACAAACTACTTAAAA",11,129.69,10.58,-0.25,0.04,2.94,1.06,0,">1 nonsynonymous","T55H D98Y S129D",3
"lib2","SARS-CoV-2","AACAAACTGACACAAA",3,11.9,6,-4.84,2,3,1.01,0,">1 nonsynonymous","V11G L95C N110V G152K",4
"lib2","SARS-CoV-2","AACAAACTTAAATGAA",18,134.45,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I72M F99A V103N D112T S200T",5
"lib2","SARS-CoV-2","AACAAACTTTAGCGCA",3,32.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37N T63Y L95A N118Y Y159L K198N",6
"lib2","SARS-CoV-2","AACAAACTTTCAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8Y C61V I88L F134N N171*",5
"lib2","SARS-CoV-2","AACAAACTTTGTCTAA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","S69N N157* R179S",3
"lib2","SARS-CoV-2","AACAAAGAACCACAAC",2,18.35,10.47,-0.37,0.07,2.96,1,0,">1 nonsynonymous","I2S D59Y K87S L122Q",4
"lib2","SARS-CoV-2","AACAAAGAACGCAACG",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S A14D A22M I72K T85S Y123I",6
"lib2","SARS-CoV-2","AACAAAGAATATGTTT",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y I88Y",2
"lib2","SARS-CoV-2","AACAAAGAATTAAAGG",13,167.47,9.68,-1.16,0.03,2.94,1.05,0,">1 nonsynonymous","R27L K87D",2
"lib2","SARS-CoV-2","AACAAAGACACTCCCT",7,0.82,NA,NA,NA,NA,NA,NA,"stop","G51H F167*",2
"lib2","SARS-CoV-2","AACAAAGAGGACAACA",1,58.83,9.82,-1.02,0.07,2.99,1.05,0,">1 nonsynonymous","K87E K198M",2
"lib2","SARS-CoV-2","AACAAAGATATTAAAC",5,62.72,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A89D N107K N157D",3
"lib2","SARS-CoV-2","AACAAAGATCATGCCG",8,191.8,8.08,-2.76,0.15,1.63,1.08,0.01,">1 nonsynonymous","S53L N107I",2
"lib2","SARS-CoV-2","AACAAAGATTCGGTCC",6,121.78,9.67,-1.17,0.07,2.83,1.06,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","AACAAAGCAAAATCGA",1,8.75,10.94,0.11,0.21,2.67,1.1,0.01,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","AACAAAGCAACGGAGT",1,23.23,10.67,-0.16,0.1,2.8,1.16,0,">1 nonsynonymous","I2E S19P N151K V173L",4
"lib2","SARS-CoV-2","AACAAAGCATCTGTAT",5,64.97,7.94,-2.9,0.15,1.5,1.14,0.01,">1 nonsynonymous","Y165L L183V",2
"lib2","SARS-CoV-2","AACAAAGCCGCTACCA",4,48.75,10.55,-0.29,0.04,2.91,1.08,0,">1 nonsynonymous","F62T S129P",2
"lib2","SARS-CoV-2","AACAAAGCGATTCTCC",6,25.22,6.06,-4.78,1.01,1.5,1.18,0.02,">1 nonsynonymous","A81V N107I V115K",3
"lib2","SARS-CoV-2","AACAAAGCTGTCAATG",6,42.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68K G86C D98G F167M",4
"lib2","SARS-CoV-2","AACAAAGCTTACACCT",4,40.85,7.45,-3.38,0.29,1.58,1.15,0.02,">1 nonsynonymous","F44V K132S A145E N151P",4
"lib2","SARS-CoV-2","AACAAAGGAAATATTT",11,161.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36M I88M L95E",3
"lib2","SARS-CoV-2","AACAAAGGACTAACAG",8,12.51,6,-4.84,1.28,3,1.22,0.01,">1 nonsynonymous","N13V E76A",2
"lib2","SARS-CoV-2","AACAAAGGAGGAATCG",10,17.85,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S43P D90L F99R A105V K128T C158Y",6
"lib2","SARS-CoV-2","AACAAAGGATATTCTG",11,1.82,NA,NA,NA,NA,NA,NA,"stop","I2M L60S A89* F160K",4
"lib2","SARS-CoV-2","AACAAAGGGTTTGACT",4,116.97,8.7,-2.13,0.09,2.79,1.09,0,">1 nonsynonymous","I2C N13F Y119S",3
"lib2","SARS-CoV-2","AACAAAGGTGAAGAAA",1,21.63,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N40K R127L",2
"lib2","SARS-CoV-2","AACAAAGTAAACCTAA",9,291.57,10.76,-0.08,0.02,2.97,1.04,0,"1 nonsynonymous","K114N",1
"lib2","SARS-CoV-2","AACAAAGTATAAAGAA",9,170.64,9.64,-1.19,0.08,1.92,1.08,0,">1 nonsynonymous","V52Y D90V",2
"lib2","SARS-CoV-2","AACAAAGTGACCAGCA",17,278.42,9.98,-0.85,0.04,2.83,1.08,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","AACAAAGTGATTAAGC",1,32.53,10.31,-0.53,0.05,2.94,1.03,0,">1 nonsynonymous","Y66H Q168S",2
"lib2","SARS-CoV-2","AACAAAGTGTTGGTTC",8,166.21,10.11,-0.73,0.03,2.93,1.06,0,">1 nonsynonymous","N24D V115M G155N",3
"lib2","SARS-CoV-2","AACAAAGTTAATGAGG",13,20.09,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","F8S G9C A14Y D34T N107L I142P E154L S164Y",8
"lib2","SARS-CoV-2","AACAAAGTTGACTTGC",2,44.41,10.75,-0.08,0.03,2.92,1.06,0,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","AACAAAGTTTGTATAA",9,71.52,8.07,-2.77,0.1,1.51,1.08,0,"1 nonsynonymous","I88F",1
"lib2","SARS-CoV-2","AACAAATAAAGAGGAA",19,106.58,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G86Q N107L",2
"lib2","SARS-CoV-2","AACAAATAAATATATT",6,74.43,9.76,-1.07,0.08,2.13,1.05,0,">1 nonsynonymous","L5K C102V K114M",3
"lib2","SARS-CoV-2","AACAAATAAGAAACGA",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76K G101A",2
"lib2","SARS-CoV-2","AACAAATAATAAAAAA",10,73.6,9.8,-1.04,0.09,2.19,1.04,0,">1 nonsynonymous","V77A N120A",2
"lib2","SARS-CoV-2","AACAAATACCGCTACA",8,116.56,8.07,-2.76,0.2,1.75,1.16,0.01,">1 nonsynonymous","P96V G166C",2
"lib2","SARS-CoV-2","AACAAATACGGGTGAT",9,59.39,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","N107F I138E F167R",3
"lib2","SARS-CoV-2","AACAAATAGAAATTTA",5,76.87,10.79,-0.04,0.05,2.96,1.05,0,">1 nonsynonymous","V37L N64F",2
"lib2","SARS-CoV-2","AACAAATAGTAACTCG",6,56.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22R G51V T63I P96T Y119T P149N",6
"lib2","SARS-CoV-2","AACAAATATAAGCTGT",11,3.06,NA,NA,NA,NA,NA,NA,"stop","E76* Y91K",2
"lib2","SARS-CoV-2","AACAAATATATCTAGC",15,81.1,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A89K D97Q G146S",3
"lib2","SARS-CoV-2","AACAAATATTAACTGA",1,99.04,10.72,-0.12,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAATCAACGATAG",6,39.92,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","D90S G101R A145M F156P",4
"lib2","SARS-CoV-2","AACAAATCAATCAAAA",7,0.56,NA,NA,NA,NA,NA,NA,"stop","S36* D90P T148A",3
"lib2","SARS-CoV-2","AACAAATCACAATTTT",11,201.03,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C49W K94D",2
"lib2","SARS-CoV-2","AACAAATCAGAGTCCA",6,123.75,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","K132N V153R G172T",3
"lib2","SARS-CoV-2","AACAAATCATCGAGGG",8,134.54,10.74,-0.09,0.02,2.92,1.09,0,"1 nonsynonymous","P133A",1
"lib2","SARS-CoV-2","AACAAATCCAGCATAA",2,9.34,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N58V P82H L95V V115Q",4
"lib2","SARS-CoV-2","AACAAATCCTTGATAA",6,40.48,9.53,-1.31,0.1,1.78,1.2,0,">1 nonsynonymous","A14H A22T E141G",3
"lib2","SARS-CoV-2","AACAAATCGAGAATTA",8,64.64,8.6,-2.24,0.12,1.98,1.12,0.01,">1 nonsynonymous","Y121M G152I",2
"lib2","SARS-CoV-2","AACAAATCGGATAAAA",1,31.84,10.47,-0.37,0.09,2.99,1.02,0,">1 nonsynonymous","T55Y C61P G83R Y178F",4
"lib2","SARS-CoV-2","AACAAATCTCAGTAGG",9,5.92,7.91,-2.93,0.22,2.49,1.12,0.03,">1 nonsynonymous","L5I W23E A42N D97I S129N L183S",6
"lib2","SARS-CoV-2","AACAAATCTCCAGCAC",14,213.95,10.84,0,0.03,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAATCTCTCATAT",6,1.47,NA,NA,NA,NA,NA,NA,"stop","N4C V32* K94R T100L D112S G174W P197S",7
"lib2","SARS-CoV-2","AACAAATCTTGGTTTG",24,31.55,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61S A81S F99R K128Y D137M",5
"lib2","SARS-CoV-2","AACAAATGTATACAGA",7,118.3,10.47,-0.37,0.04,2.93,1.08,0,">1 nonsynonymous","S19Q I28F T201E",3
"lib2","SARS-CoV-2","AACAAATGTCTTATCA",6,85.1,7.85,-2.98,0.11,2.15,1.1,0,">1 nonsynonymous","I2K C158A",2
"lib2","SARS-CoV-2","AACAAATTAAACAAAC",15,3.93,NA,NA,NA,NA,NA,NA,"stop","L5* V37K",2
"lib2","SARS-CoV-2","AACAAATTATGAACCA",9,45,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","S19T G166P S184R",3
"lib2","SARS-CoV-2","AACAAATTCCCTGAAG",5,19.86,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95S N107H Y119C L125S P149Y",5
"lib2","SARS-CoV-2","AACAAATTGATGCTTG",4,21.68,9.93,-0.91,0.09,2.57,1.07,0,">1 nonsynonymous","P7F F44P",2
"lib2","SARS-CoV-2","AACAACAAAATTGATA",2,2.14,NA,NA,NA,NA,NA,NA,"stop","P7D Q84R V115*",3
"lib2","SARS-CoV-2","AACAACAAACCTTACT",3,18.09,9.28,-1.56,0.1,1.88,1.09,0,">1 nonsynonymous","S36E D97L D112I N120R L188P",5
"lib2","SARS-CoV-2","AACAACAAAGATAAAG",9,97.48,10.22,-0.62,0.04,2.96,1.02,0,">1 nonsynonymous","Y121L V173H K199N",3
"lib2","SARS-CoV-2","AACAACAACACATAAA",1,20.52,6.04,-4.8,0.98,1.5,1.1,0.02,">1 nonsynonymous","T63L S129D Y178P",3
"lib2","SARS-CoV-2","AACAACAACCTACCTA",6,13.32,6.4,-4.44,2,1.5,1.05,0.03,">1 nonsynonymous","T3R F47W R124A K199G",4
"lib2","SARS-CoV-2","AACAACAACTGAGATG",2,95.67,10.45,-0.39,0.03,2.94,1.03,0,">1 nonsynonymous","K94R F160E",2
"lib2","SARS-CoV-2","AACAACAAGATGTTAT",11,1.34,NA,NA,NA,NA,NA,NA,"stop","F47* Y91M R136L P149Y Y165V",5
"lib2","SARS-CoV-2","AACAACAAGTAAATTA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","Y50* D90F",2
"lib2","SARS-CoV-2","AACAACAAGTCGAGAG",4,100.66,10.31,-0.53,0.05,2.86,1.05,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","AACAACAATAGCACAG",5,0.26,NA,NA,NA,NA,NA,NA,"stop","N1V Y91W N107* P169N",4
"lib2","SARS-CoV-2","AACAACAATGGCCGAA",5,7.95,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","T3C W23C C102N N120Y",4
"lib2","SARS-CoV-2","AACAACACAAGAGCCG",3,15.06,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","C49R G83N N110K G166T",4
"lib2","SARS-CoV-2","AACAACACATAGAACA",5,134.89,10.74,-0.1,0.03,2.94,1.06,0,">1 nonsynonymous","N4T T55Y",2
"lib2","SARS-CoV-2","AACAACACCACTAATG",7,107.91,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86L T140F",2
"lib2","SARS-CoV-2","AACAACACCTTACCAT",2,20.76,10.84,0.01,0.07,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAACAGACCCCACT",6,10.01,6.08,-4.76,0.67,3,1.09,0.01,">1 nonsynonymous","P82Q G86W",2
"lib2","SARS-CoV-2","AACAACAGGCCTCTCT",5,16.72,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D68L T85L Y143G Q144K",4
"lib2","SARS-CoV-2","AACAACATAGCTTGAT",8,54.86,10.89,0.06,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACAACATCTCTCTTC",1,63.56,10.68,-0.15,0.03,2.97,1.03,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","AACAACATGGAACAAA",1,39.71,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y35V I88P C158F",3
"lib2","SARS-CoV-2","AACAACATGGTATAAA",5,51.07,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W106K G117M F156L",3
"lib2","SARS-CoV-2","AACAACATTACTGCGA",2,32.79,8.16,-2.68,0.13,2.64,1.03,0.01,"1 nonsynonymous","Y159A",1
"lib2","SARS-CoV-2","AACAACATTAGATTGT",5,6.03,6.31,-4.53,0.66,3,1.11,0.02,">1 nonsynonymous","C6L E10Y A33S C49R L57S",5
"lib2","SARS-CoV-2","AACAACCAAAGGTATT",3,36.95,10.73,-0.1,0.1,2.77,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAACCAAGGGGGGG",2,7.59,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","AACAACCATAAACTTA",1,22.11,9.23,-1.61,0.37,1.5,1,0.06,">1 nonsynonymous","V37I K94E T148Q",3
"lib2","SARS-CoV-2","AACAACCCAACTAGGC",3,66.67,10.39,-0.45,0.07,2.87,1.07,0,"1 nonsynonymous","Y35G",1
"lib2","SARS-CoV-2","AACAACCCAGTCCATA",13,148.77,9.57,-1.27,0.03,2.89,1.1,0,">1 nonsynonymous","K87L N118M",2
"lib2","SARS-CoV-2","AACAACCCAGTCGTAT",2,108.16,10.86,0.02,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAACCCATAATATT",12,207.86,9.27,-1.56,0.03,2.91,1.09,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","AACAACCCCACACCTT",10,46.95,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G51I N107T I138Y",3
"lib2","SARS-CoV-2","AACAACCCGTCCAATC",8,52.99,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","I88T W106R D112M T148G K198V",5
"lib2","SARS-CoV-2","AACAACCCGTTTATGG",5,24.18,10.72,-0.12,0.03,2.99,1,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AACAACCCTAGAAAAT",1,3.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146C",1
"lib2","SARS-CoV-2","AACAACCGTTCTAACT",4,3.95,NA,NA,NA,NA,NA,NA,"stop","E10F C150*",2
"lib2","SARS-CoV-2","AACAACCTAGGGAGAA",2,48.15,8.38,-2.46,0.12,2.09,1.05,0.01,">1 nonsynonymous","C31I S53P V115R P169Q",4
"lib2","SARS-CoV-2","AACAACCTCAGTAGAC",10,70.24,10.19,-0.64,0.04,3,1.02,0,"1 nonsynonymous","G166S",1
"lib2","SARS-CoV-2","AACAACCTTAAGAACA",4,37.81,6,-4.84,2,1.5,1.36,0.06,">1 nonsynonymous","F62D A105S R136S I142M",4
"lib2","SARS-CoV-2","AACAACGAAATACAAT",4,81.12,9.25,-1.58,0.1,1.79,1.09,0,">1 nonsynonymous","C49L P54S",2
"lib2","SARS-CoV-2","AACAACGCACAAAATA",3,99.14,10.67,-0.17,0.02,2.92,1.08,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AACAACGCGTATAGTA",2,13.01,10.33,-0.51,0.16,1.79,1,0.02,">1 nonsynonymous","K94F K128S",2
"lib2","SARS-CoV-2","AACAACGCGTTTTACT",5,15.42,9.43,-1.41,0.1,2.59,1.07,0.01,">1 nonsynonymous","L5A F134C G155D",3
"lib2","SARS-CoV-2","AACAACGGCCCAATTC",6,46.03,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","D90K F99L A105L S129A",4
"lib2","SARS-CoV-2","AACAACGGCCTTCAAA",2,9.9,8.93,-1.91,0.13,2.26,1.01,0.01,">1 nonsynonymous","F8R A33N T201R",3
"lib2","SARS-CoV-2","AACAACGTACTCTGAA",9,41.8,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","I2F C49S P177V",3
"lib2","SARS-CoV-2","AACAACGTATAAATCC",7,28.64,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C6I F12Q W23Y D68W G86K D98T S139N P149G K199N",9
"lib2","SARS-CoV-2","AACAACGTTAACGAAG",1,12.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2V T15S F44V K56R C61T D68R G101S P149R",8
"lib2","SARS-CoV-2","AACAACGTTCATTAAT",8,109.55,6.61,-4.22,0.23,1.5,1.14,0.01,"1 nonsynonymous","R127P",1
"lib2","SARS-CoV-2","AACAACTAAAATCGAA",6,12.79,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P7D C49Q G86I G166R",4
"lib2","SARS-CoV-2","AACAACTAAATACTAT",7,32.98,7.27,-3.57,0.37,1.5,1.12,0.04,">1 nonsynonymous","T3P D90V G116K G174R",4
"lib2","SARS-CoV-2","AACAACTCACAGGCAA",3,33.94,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","Y50T Y93D S113C L183V K199T",5
"lib2","SARS-CoV-2","AACAACTCCATAAGCC",9,118.39,9.34,-1.5,0.11,1.85,1.09,0.01,">1 nonsynonymous","V52I S108V T148N E154L Q163I T201V",6
"lib2","SARS-CoV-2","AACAACTCTAAACAAA",2,14.61,6,-4.84,2,2.51,1.21,0.01,">1 nonsynonymous","Y121T E141R Y165S",3
"lib2","SARS-CoV-2","AACAACTCTTCTAGTA",5,85.22,10.67,-0.17,0.03,2.95,1.04,0,">1 nonsynonymous","F62S K87Y K198L",3
"lib2","SARS-CoV-2","AACAACTGATCTATTC",14,83.25,6.2,-4.64,0.89,1.5,1.23,0.02,">1 nonsynonymous","F99Y N151L R179D",3
"lib2","SARS-CoV-2","AACAACTTAGTCCCCG",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136N T148R F160P",3
"lib2","SARS-CoV-2","AACAACTTATCTAAGC",4,32.14,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7D I88F D97K S184P",4
"lib2","SARS-CoV-2","AACAACTTATGCCTGA",5,99.45,9.49,-1.35,0.05,2.68,1.07,0,">1 nonsynonymous","L57C F156I",2
"lib2","SARS-CoV-2","AACAACTTCAAACCAG",3,45.41,9.04,-1.8,0.18,1.6,1.09,0.01,">1 nonsynonymous","V37F N58L P82S",3
"lib2","SARS-CoV-2","AACAACTTGACACATG",5,8.04,NA,NA,NA,NA,NA,NA,"stop","T15G V37* Y119P I138H V153K",5
"lib2","SARS-CoV-2","AACAACTTTAGCTCCT",2,2.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70C",1
"lib2","SARS-CoV-2","AACAACTTTGTCTGAA",2,9.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51C D75R N92Q G101L T148E F167E V173N",7
"lib2","SARS-CoV-2","AACAACTTTTGCCCCG",4,39.83,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6A L60A D90E L111A N120K Q144P",6
"lib2","SARS-CoV-2","AACAAGAAAAAACCCC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","L60G Y93* A190S P197V",4
"lib2","SARS-CoV-2","AACAAGAAAACTAAAT",1,9.74,10.79,-0.05,0.07,2.89,1.14,0,">1 nonsynonymous","A81E T201G",2
"lib2","SARS-CoV-2","AACAAGAAACAGGAAC",5,0.34,NA,NA,NA,NA,NA,NA,"stop","L5* S69R G83S K87T",4
"lib2","SARS-CoV-2","AACAAGAAAGATTATA",13,119.95,10.73,-0.11,0.02,2.91,1.11,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","AACAAGAAATGTTAAG",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E T85R R124S T170S P197F",5
"lib2","SARS-CoV-2","AACAAGAACCTCCCCG",13,89.88,9.84,-0.99,0.06,1.98,1.08,0,">1 nonsynonymous","N58M W106K",2
"lib2","SARS-CoV-2","AACAAGAAGACCTTTA",14,32.19,6,-4.84,1.07,3,1.11,0,">1 nonsynonymous","F44L L57F A89T P133I C150R",5
"lib2","SARS-CoV-2","AACAAGAAGCTTGATG",1,5.61,6.74,-4.1,2,3,1.05,0.01,">1 nonsynonymous","G9C P133L P149M",3
"lib2","SARS-CoV-2","AACAAGAAGTACTGGA",2,66.69,10.92,0.08,0.05,2.98,1.02,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","AACAAGAATACCACTA",8,56.09,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","I80R A105N P177V",3
"lib2","SARS-CoV-2","AACAAGACAATCGATG",4,49.5,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S108L T148M Y165D",3
"lib2","SARS-CoV-2","AACAAGACATTAACCC",1,27.63,9.92,-0.91,0.13,2.6,1.01,0.01,">1 nonsynonymous","D59L Y66C S139T",3
"lib2","SARS-CoV-2","AACAAGACGAGAGATT",3,27.96,6,-4.84,0.86,3,1.14,0.01,">1 nonsynonymous","P7T W23K K94A",3
"lib2","SARS-CoV-2","AACAAGAGCAGTATTA",2,32.14,9.28,-1.56,0.11,2.84,1.08,0,">1 nonsynonymous","A33V G146R",2
"lib2","SARS-CoV-2","AACAAGAGGATCTATA",5,48.42,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N40H G101H G155S T201G",4
"lib2","SARS-CoV-2","AACAAGAGGGCTATCC",2,66.73,10.69,-0.14,0.04,2.94,1.06,0,"1 nonsynonymous","V153T",1
"lib2","SARS-CoV-2","AACAAGATAAACCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","R73* P133R",2
"lib2","SARS-CoV-2","AACAAGATAAAGGCTT",13,136.5,10.07,-0.77,0.05,2.66,1.03,0,">1 nonsynonymous","P54C L60K I142M",3
"lib2","SARS-CoV-2","AACAAGATACGTTCAA",2,31.01,9.91,-0.92,0.13,2.06,1.06,0.01,">1 nonsynonymous","L5F G51Y",2
"lib2","SARS-CoV-2","AACAAGATGTACGAGT",5,81.15,10.89,0.06,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAGATTTCATAAG",2,0.23,NA,NA,NA,NA,NA,NA,"stop","P7L K26* T100E F167L",4
"lib2","SARS-CoV-2","AACAAGCACACCCGGG",11,47.28,6.43,-4.41,0.58,1.5,1.17,0.03,">1 nonsynonymous","W23S K132P T201L",3
"lib2","SARS-CoV-2","AACAAGCACGTGGGAA",14,34.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14F A42V K56M Y159R P197R",5
"lib2","SARS-CoV-2","AACAAGCACTTTTTAT",7,242.38,10.1,-0.74,0.03,2.91,1.06,0,">1 nonsynonymous","D90S G166S",2
"lib2","SARS-CoV-2","AACAAGCATTAAAGCC",2,139.13,10.87,0.03,0.06,2.93,1.09,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","AACAAGCCAAACGTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","L38N S43E A105T S113*",4
"lib2","SARS-CoV-2","AACAAGCCATAAGACC",9,3.19,NA,NA,NA,NA,NA,NA,"stop","Y35* F134S",2
"lib2","SARS-CoV-2","AACAAGCGCCCTGTGG",6,72.11,9.94,-0.9,0.07,2.22,1.05,0,">1 nonsynonymous","L60M V103L P197K",3
"lib2","SARS-CoV-2","AACAAGCGCGAAATAA",2,20.21,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","F99K L125H",2
"lib2","SARS-CoV-2","AACAAGCGCGTTATAG",4,46.89,11,0.17,0.04,2.99,1.02,0,"1 nonsynonymous","Y178F",1
"lib2","SARS-CoV-2","AACAAGCTATATCCAA",5,22.72,10.26,-0.57,0.1,2.78,1,0.01,"1 nonsynonymous","Y93F",1
"lib2","SARS-CoV-2","AACAAGCTTCAGCGTA",2,10.98,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T85R V180N",2
"lib2","SARS-CoV-2","AACAAGCTTCATGAAA",4,143.79,10.34,-0.5,0.05,2.84,1.02,0,">1 nonsynonymous","S41N N107R",2
"lib2","SARS-CoV-2","AACAAGGAAGCCTGTT",2,31.42,10.26,-0.58,0.06,2.73,1.15,0,"1 nonsynonymous","D59I",1
"lib2","SARS-CoV-2","AACAAGGACGAAGCAT",7,37.16,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","S41Y Y91A D98R G166W",4
"lib2","SARS-CoV-2","AACAAGGACTTACAAT",2,32.44,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","N4T G86V F99T N107A",4
"lib2","SARS-CoV-2","AACAAGGATAGACAAA",5,1.84,NA,NA,NA,NA,NA,NA,"stop","K56* D68N L95Q D112*",4
"lib2","SARS-CoV-2","AACAAGGCAAAATTTA",6,59.02,10.79,-0.04,0.04,2.94,1.07,0,">1 nonsynonymous","N1C N130Q P197H",3
"lib2","SARS-CoV-2","AACAAGGCATGCCTAA",3,26.73,9.13,-1.71,0.18,1.5,1.04,0.02,">1 nonsynonymous","D90G P96E A190G",3
"lib2","SARS-CoV-2","AACAAGGCTACCAATA",1,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M T63S P82T L122I P149I",5
"lib2","SARS-CoV-2","AACAAGGCTCAGTCAA",1,53.04,10.36,-0.47,0.03,2.86,1.09,0,"1 nonsynonymous","F47C",1
"lib2","SARS-CoV-2","AACAAGGGCAGCGCTG",11,150.82,10.81,-0.02,0.05,2.93,1.08,0,"1 nonsynonymous","R27E",1
"lib2","SARS-CoV-2","AACAAGGTACAGAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S G117R R136L",3
"lib2","SARS-CoV-2","AACAAGGTAGAGCTGG",6,9.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S36Y I88V C102W S129W P149S F160N",6
"lib2","SARS-CoV-2","AACAAGGTAGCAACTA",9,10.18,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","E10P W23I D34Y V103E G146A F156Q",6
"lib2","SARS-CoV-2","AACAAGGTCTGTAAAC",3,0.46,NA,NA,NA,NA,NA,NA,"stop","S29F Y39W T100A L122R K128*",5
"lib2","SARS-CoV-2","AACAAGGTTAAAATCG",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52C N92F N157F",3
"lib2","SARS-CoV-2","AACAAGTAACTCAAAT",9,80.29,10.76,-0.07,0.02,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAGTAAGTATAGC",5,23.2,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25S C49L N151S T201D",4
"lib2","SARS-CoV-2","AACAAGTAATGATTTA",9,27.39,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V103N D137L Q144L",3
"lib2","SARS-CoV-2","AACAAGTACAAATGCC",2,11.65,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","G51T Q84R P96N S184R",4
"lib2","SARS-CoV-2","AACAAGTACACCAGAA",1,8.52,9.98,-0.85,0.19,2.42,1.03,0.01,">1 nonsynonymous","T3P A18E L60C S184Y",4
"lib2","SARS-CoV-2","AACAAGTAGAAAAATA",7,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F P96L G101T E141I C158D V181C",6
"lib2","SARS-CoV-2","AACAAGTAGCACGAGA",2,29.2,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27L Y143L C150S",3
"lib2","SARS-CoV-2","AACAAGTAGGATAAAG",6,0.72,NA,NA,NA,NA,NA,NA,"stop","F8L Y119*",2
"lib2","SARS-CoV-2","AACAAGTCCGCCGATA",3,48.2,9.15,-1.68,0.09,1.77,1.11,0,">1 nonsynonymous","V37S P82R",2
"lib2","SARS-CoV-2","AACAAGTCTGCTTTGG",6,59.23,10.66,-0.17,0.03,2.93,1.08,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","AACAAGTGCCAGACCA",3,0,NA,NA,NA,NA,NA,NA,"stop","V37D P96R T148*",3
"lib2","SARS-CoV-2","AACAAGTGCCGCTTGG",1,84,10.86,0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAAGTGCTATTAAA",4,21.87,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","G9C D98G I104K K128V P169R",5
"lib2","SARS-CoV-2","AACAATAAAAAACCTA",5,0.84,NA,NA,NA,NA,NA,NA,"stop","C49* S147H C150S F167G",4
"lib2","SARS-CoV-2","AACAATAAAATCCGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C6F F12R L38P S45* P197T",5
"lib2","SARS-CoV-2","AACAATAACCACAGCC",17,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S Y66R N107T A145V",4
"lib2","SARS-CoV-2","AACAATAACTCTACAA",17,218.72,10.63,-0.21,0.03,2.94,1.08,0,"1 nonsynonymous","P169R",1
"lib2","SARS-CoV-2","AACAATAAGAGAGAAA",1,109.49,10.09,-0.74,0.05,2.96,1.03,0,">1 nonsynonymous","N110I G174W",2
"lib2","SARS-CoV-2","AACAATAAGTACTCGG",1,5.4,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","L95H S113A",2
"lib2","SARS-CoV-2","AACAATAAGTTCAAAT",4,32.55,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","K56A I88L D98N R124Q E141Y C158D A192F",7
"lib2","SARS-CoV-2","AACAATAATCACGCCG",1,68.5,10.07,-0.77,0.09,2.29,1.01,0,">1 nonsynonymous","I28M Y91N S139H",3
"lib2","SARS-CoV-2","AACAATAATTGGCAAA",1,31.57,10.07,-0.77,0.12,2.27,1,0.01,">1 nonsynonymous","L5K D98A R136S",3
"lib2","SARS-CoV-2","AACAATAATTTAAATC",7,67.67,7.18,-3.65,0.27,1.5,1.09,0.02,">1 nonsynonymous","Y21N Y35K G152S",3
"lib2","SARS-CoV-2","AACAATACACAATATG",5,51.63,9.7,-1.14,0.07,2.98,1.08,0,">1 nonsynonymous","N151D V153S T170G",3
"lib2","SARS-CoV-2","AACAATACATATATTT",2,8.57,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","T85P V180S T201A",3
"lib2","SARS-CoV-2","AACAATACCATAAAAG",4,33.02,7.98,-2.86,0.2,2.03,1.19,0.02,">1 nonsynonymous","I2K S53D C150D",3
"lib2","SARS-CoV-2","AACAATACCGATATTA",17,310.54,8.79,-2.04,0.08,2.5,1.09,0,">1 nonsynonymous","C31L Y39Q D59R G166S",4
"lib2","SARS-CoV-2","AACAATACCTACTAGA",3,48.47,10.63,-0.2,0.04,3,1.03,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","AACAATACCTTAGTAA",10,149.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D97C Q168P",2
"lib2","SARS-CoV-2","AACAATACTGGGTCGA",13,118.95,9.79,-1.05,0.08,2.07,1.04,0,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","AACAATAGAAAAACTT",4,46.43,7.56,-3.27,0.38,1.5,1.07,0.04,">1 nonsynonymous","K94L Y119Q",2
"lib2","SARS-CoV-2","AACAATAGGATAATAT",5,83.04,6.06,-4.77,0.63,1.5,1.14,0.01,">1 nonsynonymous","A14L D98Q L125K",3
"lib2","SARS-CoV-2","AACAATAGGATGCTAT",4,91.21,8.12,-2.72,0.16,2.03,1.05,0.01,">1 nonsynonymous","F12V Y159Q",2
"lib2","SARS-CoV-2","AACAATATAAAAAATA",2,11.94,9.82,-1.02,0.18,2.56,1.11,0.01,"1 nonsynonymous","W23P",1
"lib2","SARS-CoV-2","AACAATATAAACACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S69* P96Q G152N G172M F185S",5
"lib2","SARS-CoV-2","AACAATATAACCGATA",2,17.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14D T15I A42N",3
"lib2","SARS-CoV-2","AACAATATACACATCA",1,9.64,9.44,-1.39,0.17,2.48,1,0.02,">1 nonsynonymous","N118Q P133V",2
"lib2","SARS-CoV-2","AACAATATATAAATTG",5,11.1,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49T C61D V180S",3
"lib2","SARS-CoV-2","AACAATATCGATTAGG",6,63.27,10.2,-0.63,0.06,2.92,1,0,"1 nonsynonymous","C31I",1
"lib2","SARS-CoV-2","AACAATATGAAGCATG",13,3.42,NA,NA,NA,NA,NA,NA,"stop","N92H A105* P149D P161E",4
"lib2","SARS-CoV-2","AACAATATGTCATCCC",9,74.08,9.11,-1.73,0.08,2.51,1.04,0,">1 nonsynonymous","G51Y G174E T201R",3
"lib2","SARS-CoV-2","AACAATATTATGATCT",1,43.33,10.76,-0.08,0.08,2.77,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAATATTCTAGGCA",4,156.84,10.78,-0.05,0.05,2.91,1.11,0,">1 nonsynonymous","N120K K132N",2
"lib2","SARS-CoV-2","AACAATATTTTTAACA",1,9.61,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","I2S A33E V77L G86F",4
"lib2","SARS-CoV-2","AACAATCAAAAACGCC",7,259.47,10.9,0.07,0.06,2.91,1.07,0,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","AACAATCAATAACATA",6,40.85,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41R N64I G86K R179T",4
"lib2","SARS-CoV-2","AACAATCACACCCTGC",4,102.01,8.33,-2.5,0.09,2.44,1.03,0,"1 nonsynonymous","P161D",1
"lib2","SARS-CoV-2","AACAATCAGATTAGTG",5,61.94,10.83,0,0.04,2.96,1.05,0,">1 nonsynonymous","F62M T148S",2
"lib2","SARS-CoV-2","AACAATCATTGACGGT",4,24.74,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","E135K E141F N157L",3
"lib2","SARS-CoV-2","AACAATCCAAATCAAA",2,31.18,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y39S R179W",2
"lib2","SARS-CoV-2","AACAATCCACGTAAAA",3,72.71,6.98,-3.86,0.15,1.61,1.12,0,">1 nonsynonymous","A67L R136L Y175R",3
"lib2","SARS-CoV-2","AACAATCCATCAGATG",1,8.51,9.74,-1.09,0.17,2.21,1,0.01,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","AACAATCCGAAAACAG",9,3.1,NA,NA,NA,NA,NA,NA,"stop","N24F S41*",2
"lib2","SARS-CoV-2","AACAATCCTGCGCAAA",7,113.79,10.43,-0.4,0.03,2.95,1.03,0,">1 nonsynonymous","Y39C T85M F160K",3
"lib2","SARS-CoV-2","AACAATCGATAACTCG",7,55.32,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","G9R P96V A105V G152N",4
"lib2","SARS-CoV-2","AACAATCGGTAACGAC",8,86.21,7.55,-3.28,0.2,1.5,1.15,0.01,">1 nonsynonymous","N1S L38D D97C",3
"lib2","SARS-CoV-2","AACAATCGTAAAAACT",11,58.72,9.29,-1.54,0.14,1.51,1.15,0.01,">1 nonsynonymous","V11L Y50W A105N",3
"lib2","SARS-CoV-2","AACAATCTAAGCTGCA",13,169.94,9.95,-0.89,0.09,2.43,1.04,0,">1 nonsynonymous","K56C S69M",2
"lib2","SARS-CoV-2","AACAATCTCTCCTAAT",3,9.56,8.62,-2.22,0.27,1.54,1.06,0.02,">1 nonsynonymous","A67H V153D",2
"lib2","SARS-CoV-2","AACAATCTGCAAGACA",3,25.15,9.48,-1.35,0.23,1.5,1.11,0.02,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","AACAATCTTCGGCTGA",5,77.34,10.67,-0.17,0.04,2.94,1.06,0,">1 nonsynonymous","T63D P149M",2
"lib2","SARS-CoV-2","AACAATGACAAGTCCC",3,57.29,10.84,0.01,0.05,3,1.03,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","AACAATGACTAACTAT",8,21.18,7.09,-3.75,0.35,1.71,1.2,0.02,">1 nonsynonymous","P7M A14V N64S C158F",4
"lib2","SARS-CoV-2","AACAATGATGACAAGC",5,50.79,10.74,-0.09,0.02,3,1.01,0,">1 nonsynonymous","I28M G51N F160L",3
"lib2","SARS-CoV-2","AACAATGATTGCGTAG",3,22.53,9.93,-0.9,0.1,2.44,1.06,0,">1 nonsynonymous","G9C Y35T",2
"lib2","SARS-CoV-2","AACAATGATTTACAGA",7,157.64,10.86,0.02,0.05,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AACAATGCACAAACCG",2,8.01,6.92,-3.91,0.38,1.5,1.06,0.03,">1 nonsynonymous","L5W T15W Y50T P149Q T201Q",5
"lib2","SARS-CoV-2","AACAATGCTCCTTCCC",5,0.12,NA,NA,NA,NA,NA,NA,"stop","V32* F99R I142F G152R",4
"lib2","SARS-CoV-2","AACAATGGAACATATT",3,137.01,10.08,-0.75,0.02,2.96,1.04,0,"1 nonsynonymous","Y175H",1
"lib2","SARS-CoV-2","AACAATGGATACGACC",5,101.39,10.76,-0.08,0.03,2.94,1.09,0,"1 nonsynonymous","K132I",1
"lib2","SARS-CoV-2","AACAATGGCTAAGGTG",1,17.74,10.75,-0.09,0.05,2.74,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAATGGTAATATGC",4,74.85,10.75,-0.09,0.04,2.87,1.1,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","AACAATGGTATCCCCA",1,17.2,10.87,0.03,0.09,2.83,1.19,0,">1 nonsynonymous","G9T V37Q",2
"lib2","SARS-CoV-2","AACAATGTTTACCAAG",13,5.23,NA,NA,NA,NA,NA,NA,"stop","S29P Y119* Y175L T201*",4
"lib2","SARS-CoV-2","AACAATTAAAATTGGA",20,389.74,10.83,-0.01,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAATTAAAATTTTA",2,0.98,NA,NA,NA,NA,NA,NA,"stop","T3W N30A L60T V77E G166*",5
"lib2","SARS-CoV-2","AACAATTAAAGATAGT",5,27.06,10.48,-0.35,0.43,1.66,1.1,0.07,">1 nonsynonymous","T100M G101R",2
"lib2","SARS-CoV-2","AACAATTAATATTTAA",6,57.42,6,-4.84,1.98,1.5,1.16,0.01,">1 nonsynonymous","D68V E141W",2
"lib2","SARS-CoV-2","AACAATTAGCAACGTT",3,82.25,8.06,-2.77,0.13,1.98,1.07,0.01,">1 nonsynonymous","G9R A14P Y119V",3
"lib2","SARS-CoV-2","AACAATTAGTAATTCT",10,39.98,6,-4.84,0.8,3,1.1,0,">1 nonsynonymous","I88C F99V Y143G G152C",4
"lib2","SARS-CoV-2","AACAATTATCAATCAT",3,1.64,NA,NA,NA,NA,NA,NA,"stop","F17W R25Q P54S I80F Y91* W106T S113Q E135S E141K P177K",10
"lib2","SARS-CoV-2","AACAATTATCGCCCGG",13,65.02,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T3Y N107Y P149D V153M",4
"lib2","SARS-CoV-2","AACAATTATTTGCTCA",5,52.64,10.17,-0.67,0.02,2.91,1.07,0,"1 nonsynonymous","D75V",1
"lib2","SARS-CoV-2","AACAATTCCCAGAAAG",4,105.54,10.85,0.01,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAATTTAAAGACTA",2,49.42,8.18,-2.66,0.12,1.72,1.06,0,"1 nonsynonymous","F126P",1
"lib2","SARS-CoV-2","AACAATTTAACAAGTA",9,2.36,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","AACAATTTAGCAGTAA",11,161.35,10.86,0.02,0.05,2.88,1.11,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","AACAATTTCAAAAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40Y P54I P96*",3
"lib2","SARS-CoV-2","AACAATTTGAGATTAC",4,16.97,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","N4T C61N I88Y Q168N",4
"lib2","SARS-CoV-2","AACAATTTGCTTAAAC",9,115.79,10.82,-0.02,0.05,2.92,1.09,0,"1 nonsynonymous","T140Q",1
"lib2","SARS-CoV-2","AACAATTTTATATAAC",2,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144L V181G",2
"lib2","SARS-CoV-2","AACAATTTTTCCTATT",3,2.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","AACACAAAAAATTTGC",9,171.64,10.8,-0.04,0.03,2.92,1.1,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","AACACAAAAACAGAGT",15,542.01,10.2,-0.64,0.02,2.9,1.01,0,">1 nonsynonymous","L38V F160V",2
"lib2","SARS-CoV-2","AACACAAAAAGAACTT",4,27.98,9.8,-1.03,0.2,1.77,1.1,0.02,">1 nonsynonymous","D98I A105W",2
"lib2","SARS-CoV-2","AACACAAAAATACATT",7,126.72,9.77,-1.07,0.06,2.06,1.06,0,">1 nonsynonymous","F8S T201G",2
"lib2","SARS-CoV-2","AACACAAAACAACATG",3,45.4,8.57,-2.27,0.08,2.84,1.04,0,">1 nonsynonymous","S113V N151L S184N P197W",4
"lib2","SARS-CoV-2","AACACAAAACTAAATT",13,204.77,9.64,-1.2,0.02,2.97,1.03,0,">1 nonsynonymous","T170N T201S",2
"lib2","SARS-CoV-2","AACACAAACACTTCGT",6,110.67,10.82,-0.02,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACAAAGACCGCAG",1,1135.71,10.78,-0.06,0.02,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACAAAGAGGTTAA",8,0.1,NA,NA,NA,NA,NA,NA,"stop","S43* V103N",2
"lib2","SARS-CoV-2","AACACAAAGGTCAACT",3,24,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","D90Y K132I L162S",3
"lib2","SARS-CoV-2","AACACAAATGGTTTCC",8,52.25,9.71,-1.13,0.07,2.03,1.01,0,">1 nonsynonymous","D90S R127K S184A",3
"lib2","SARS-CoV-2","AACACAAATTAAATCA",5,19.77,6.36,-4.47,0.38,1.5,1.12,0.01,">1 nonsynonymous","A18T N118D P133S V182E T201D",5
"lib2","SARS-CoV-2","AACACAACTACCAGCT",1,28.51,10.47,-0.36,0.23,2.75,1.14,0.03,"1 nonsynonymous","E154K",1
"lib2","SARS-CoV-2","AACACAACTTGTAGGA",2,22.25,10.81,-0.02,0.07,2.99,1.02,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","AACACAAGAAACCCAT",3,29.31,9.14,-1.7,0.2,1.5,1,0.01,">1 nonsynonymous","D98K L131A",2
"lib2","SARS-CoV-2","AACACAAGAGGTGTCC",8,24.03,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","T15V Y93L I138A Y159S",4
"lib2","SARS-CoV-2","AACACAAGCAAAGAGC",3,20.95,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","C49N",1
"lib2","SARS-CoV-2","AACACAAGGAACTATC",4,28.37,6,-4.84,2,3,1.08,0,">1 nonsynonymous","R16D I72Q R127H",3
"lib2","SARS-CoV-2","AACACAAGTTAAATGA",3,23.67,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F8S Y91S Y121A P133Q P161V A190E",6
"lib2","SARS-CoV-2","AACACAATAATTGACT",11,108.67,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S113T G146L",2
"lib2","SARS-CoV-2","AACACAATAGGGCAAA",5,60.94,9.68,-1.16,0.05,2.8,1.1,0,">1 nonsynonymous","G83Q V115C",2
"lib2","SARS-CoV-2","AACACAATATTATTCA",4,40.71,9.62,-1.22,0.14,2.02,1.04,0.01,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","AACACAATCGAATTAT",16,0.16,NA,NA,NA,NA,NA,NA,"stop","V37R F47* T100R K132W I142Q",5
"lib2","SARS-CoV-2","AACACAATGATAGAGT",5,50.17,8.97,-1.87,0.12,2.57,1.1,0.01,">1 nonsynonymous","I142S P149S",2
"lib2","SARS-CoV-2","AACACACAACAAACAA",2,19.67,10.91,0.07,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACACAACATCGGA",4,62.57,10.1,-0.74,0.11,2.63,1.13,0.01,">1 nonsynonymous","G9C S41G",2
"lib2","SARS-CoV-2","AACACACAAGATCTAC",6,39.77,9.36,-1.48,0.18,1.77,1.05,0.01,">1 nonsynonymous","I28R T46S",2
"lib2","SARS-CoV-2","AACACACAGGAAACAT",19,262.79,10.6,-0.24,0.02,2.91,1.06,0,">1 nonsynonymous","N4S V103I S200N",3
"lib2","SARS-CoV-2","AACACACATAATAGGC",2,86.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38H E135P F167P T201A",4
"lib2","SARS-CoV-2","AACACACATGTATTTG",5,98.54,10.07,-0.77,0.04,2.91,1.06,0,">1 nonsynonymous","T3A Q168G",2
"lib2","SARS-CoV-2","AACACACCCAAAAGAC",3,7.47,NA,NA,NA,NA,NA,NA,"stop","V37* L60P P161L",3
"lib2","SARS-CoV-2","AACACACCCCCGTTCG",1,13.05,10.78,-0.05,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACACCCCGCGACG",3,24.86,10.56,-0.27,0.08,2.87,1.14,0.01,"1 nonsynonymous","V173N",1
"lib2","SARS-CoV-2","AACACACCTGCAGAAA",5,35.7,9.16,-1.68,0.38,1.5,1,0.08,">1 nonsynonymous","Y35L A89E",2
"lib2","SARS-CoV-2","AACACACGAAAACTAC",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M S19T T63R",3
"lib2","SARS-CoV-2","AACACACGAACTATAC",4,93.92,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86D C102V Y123F F156P",4
"lib2","SARS-CoV-2","AACACACGACGTAAAA",1,42.53,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","A42P G83S C150K",3
"lib2","SARS-CoV-2","AACACACGCTATATAA",6,34.4,10.71,-0.13,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACACGTCTGAATC",3,53.68,10.85,0.01,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACACTATGTGAAA",11,45.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F70T V77K Y143W",3
"lib2","SARS-CoV-2","AACACAGACGTTTACC",1,8.19,10.74,-0.1,0.06,2.98,1,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","AACACAGATAAGCCGC",15,345.25,9.99,-0.84,0.03,2.81,1.05,0,">1 nonsynonymous","Y39R D75R T100I G116V A192V",5
"lib2","SARS-CoV-2","AACACAGATACACGAA",10,59.83,8.59,-2.25,0.08,1.87,1.08,0,">1 nonsynonymous","G9P N107V T201S",3
"lib2","SARS-CoV-2","AACACAGATTGACTCA",10,136.11,10.59,-0.25,0.03,2.91,1.08,0,">1 nonsynonymous","P54H D97S L122F S184N",4
"lib2","SARS-CoV-2","AACACAGCAGAATAGA",4,124.83,9.3,-1.54,0.03,2.93,1.09,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","AACACAGCTTAACTAT",1,16.71,10.85,0.02,0.05,3,1,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","AACACAGGAAAGGGGA",11,152.48,10.67,-0.16,0.04,2.89,1.1,0,">1 nonsynonymous","S45D T63N",2
"lib2","SARS-CoV-2","AACACAGTAAAGTCCT",2,109.21,10.85,0.01,0.05,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AACACAGTCTCTAACG",2,36.19,9.49,-1.35,0.05,2.88,1.03,0,"1 nonsynonymous","Y165H",1
"lib2","SARS-CoV-2","AACACAGTTAAACCTT",9,117.73,10.7,-0.14,0.04,2.87,1.04,0,">1 nonsynonymous","S41N T85K L122T E154L",4
"lib2","SARS-CoV-2","AACACAGTTCCAGCAA",14,104.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17Q C61P N107H K128H S139A L187F T201L",7
"lib2","SARS-CoV-2","AACACATACAAAGAAT",1,26.22,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","D90S R124D I138R",3
"lib2","SARS-CoV-2","AACACATACGCTGACC",3,60.93,10.73,-0.11,0.09,2.79,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACATAGACGACCT",11,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H V182H",2
"lib2","SARS-CoV-2","AACACATAGCCTTAAC",4,0.95,NA,NA,NA,NA,NA,NA,"stop","T55R Y91T D112* K128M",4
"lib2","SARS-CoV-2","AACACATATCCTTCCG",7,84.64,10.82,-0.01,0.07,2.81,1.11,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","AACACATATTGATCTT",3,13.72,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","I2P L95P D97E F99L",4
"lib2","SARS-CoV-2","AACACATCACTATATC",2,28.56,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K48W V77S N107T",3
"lib2","SARS-CoV-2","AACACATCCGTTGCGT",5,14.86,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T3F N64V D90T V103G Y123G",5
"lib2","SARS-CoV-2","AACACATCGACTATTG",4,49.55,8.89,-1.95,0.07,2.84,1.08,0,">1 nonsynonymous","R16C G155P",2
"lib2","SARS-CoV-2","AACACATCGAGATAAT",4,60.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y50N P149Q G172A",3
"lib2","SARS-CoV-2","AACACATCGCCCAGGA",6,92.27,10.51,-0.33,0.03,2.87,1.11,0,">1 nonsynonymous","N1F I104L",2
"lib2","SARS-CoV-2","AACACATCTATAGCTG",3,21.68,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V11N A14T N118S T170H",4
"lib2","SARS-CoV-2","AACACATCTGAAGAAA",3,50.96,9.38,-1.46,0.09,1.87,1.03,0,">1 nonsynonymous","N4M L38T",2
"lib2","SARS-CoV-2","AACACATCTTGTCATG",3,0.95,NA,NA,NA,NA,NA,NA,"stop","G9P Y39* R127G G152N S184Y",5
"lib2","SARS-CoV-2","AACACATGAGTATGCA",8,96.05,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R25L L95E F99M W106S D112M G117P",6
"lib2","SARS-CoV-2","AACACATGCCGACAGA",2,24.74,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A81P V103F",2
"lib2","SARS-CoV-2","AACACATGGCGCGCCA",2,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T Y50E",2
"lib2","SARS-CoV-2","AACACATGGGCAGACC",3,57.99,10.78,-0.06,0.06,2.93,1.06,0,">1 nonsynonymous","S36E D98P",2
"lib2","SARS-CoV-2","AACACATGGGGGCGAC",5,122.14,10.08,-0.76,0.07,2.63,1.08,0,">1 nonsynonymous","T15Y T63N P149S",3
"lib2","SARS-CoV-2","AACACATTAACTGGAG",4,26.18,6,-4.84,1.66,1.5,1.09,0.02,">1 nonsynonymous","F17S P82Y",2
"lib2","SARS-CoV-2","AACACATTATAAAGGG",13,70.08,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y91S F99R E154V",3
"lib2","SARS-CoV-2","AACACATTCCCTTCCC",1,66.09,7.96,-2.88,0.16,1.87,1.04,0.01,">1 nonsynonymous","N107I K114E",2
"lib2","SARS-CoV-2","AACACATTTAATGGAA",3,15.02,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F8R A89D",2
"lib2","SARS-CoV-2","AACACATTTGTCCCGA",4,20.1,9.63,-1.21,0.18,1.5,1.06,0.01,">1 nonsynonymous","N40H A67C F99L L183I",4
"lib2","SARS-CoV-2","AACACATTTTTAACGA",2,29.25,10.91,0.08,0.07,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACCAAAATTTGGG",8,178.47,10.67,-0.17,0.05,2.9,1.12,0,">1 nonsynonymous","S45T D97I",2
"lib2","SARS-CoV-2","AACACCAAAGTGCTTC",4,70.17,6.07,-4.77,0.27,3,1.14,0,">1 nonsynonymous","G9I G86Y",2
"lib2","SARS-CoV-2","AACACCAAATAAACCC",4,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I F47G V77M D98S V103K",5
"lib2","SARS-CoV-2","AACACCAAATTCCATC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S41Y",2
"lib2","SARS-CoV-2","AACACCAACCGCCCTT",3,3.09,NA,NA,NA,NA,NA,NA,"stop","C61S F167*",2
"lib2","SARS-CoV-2","AACACCAACTTGAAAT",4,19.85,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","Y39D L95H Y121S I138L",4
"lib2","SARS-CoV-2","AACACCAATAAAACGT",3,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R P54W T63C A89Y S129I L183P",6
"lib2","SARS-CoV-2","AACACCACATAAGTGA",10,2.51,NA,NA,NA,NA,NA,NA,"stop","S108A P149N S200*",3
"lib2","SARS-CoV-2","AACACCACCAAAGATG",3,82.22,9.06,-1.77,0.06,2.72,1.06,0,">1 nonsynonymous","S36I T55K G166C",3
"lib2","SARS-CoV-2","AACACCACGTCCCGGT",4,9.41,NA,NA,NA,NA,NA,NA,"stop","T55* T63M",2
"lib2","SARS-CoV-2","AACACCACTGAGGTCA",2,46.17,10.91,0.07,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACCAGCAAAAAGG",2,5.85,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","S29T V103S N110E F126T",4
"lib2","SARS-CoV-2","AACACCAGCCTGATCC",4,29.25,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","P82K K94Q A105M",3
"lib2","SARS-CoV-2","AACACCAGGGGATCTA",5,43.2,10.37,-0.47,0.05,2.66,1.09,0,">1 nonsynonymous","D90T E141S",2
"lib2","SARS-CoV-2","AACACCAGGTATGTTG",5,48.26,10.28,-0.56,0.05,2.83,1.02,0,">1 nonsynonymous","K26W T55H G83F",3
"lib2","SARS-CoV-2","AACACCATAGACTGGG",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N G166T",2
"lib2","SARS-CoV-2","AACACCATATATAAAC",2,18.04,10.31,-0.52,0.08,2.73,1.15,0,">1 nonsynonymous","G83Y E141A P149L",3
"lib2","SARS-CoV-2","AACACCATCTCTAGCG",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98G V103C T140S",3
"lib2","SARS-CoV-2","AACACCATCTTTCTAA",6,0,NA,NA,NA,NA,NA,NA,"stop","F12H S43* S184A",3
"lib2","SARS-CoV-2","AACACCCAATTTTGAT",5,119.78,10.54,-0.3,0.05,2.92,1.04,0,">1 nonsynonymous","N1R L122V F185W",3
"lib2","SARS-CoV-2","AACACCCATAAACTAC",15,152.71,6.18,-4.66,0.79,1.5,1.17,0.02,">1 nonsynonymous","D34V E141W Y175N",3
"lib2","SARS-CoV-2","AACACCCCAGCAAGTA",6,22.77,6,-4.84,0.73,3,1.11,0,">1 nonsynonymous","D90P Q144G",2
"lib2","SARS-CoV-2","AACACCCCCACGATCG",5,79.11,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","E10G Q168P",2
"lib2","SARS-CoV-2","AACACCCGTTGGTCTT",12,182.32,10.4,-0.43,0.03,2.93,1.03,0,">1 nonsynonymous","G51H D59A",2
"lib2","SARS-CoV-2","AACACCCTAACAAAAT",2,18.2,7.12,-3.72,0.3,1.54,1.11,0.03,">1 nonsynonymous","K26Q Y39E G86T T148S",4
"lib2","SARS-CoV-2","AACACCCTAACTTATA",8,51.54,7.62,-3.21,0.37,1.5,1.2,0.05,">1 nonsynonymous","V65E L162M",2
"lib2","SARS-CoV-2","AACACCCTAGCGCATC",5,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135V V153G V181M",3
"lib2","SARS-CoV-2","AACACCCTTACTGACC",2,16.35,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88F G146Y G166L",3
"lib2","SARS-CoV-2","AACACCGAATGGCGCA",8,40.34,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V11R G172D",2
"lib2","SARS-CoV-2","AACACCGAGAAAAATA",2,28.33,10.01,-0.83,0.07,2.86,1.14,0,">1 nonsynonymous","K87E V173Q",2
"lib2","SARS-CoV-2","AACACCGCAAAAATTT",4,67.78,10.85,0.01,0.06,2.87,1.15,0,">1 nonsynonymous","T3D S36A",2
"lib2","SARS-CoV-2","AACACCGGAACATTGC",3,223.88,9.97,-0.86,0.03,2.95,1.06,0,">1 nonsynonymous","N30E V65I K87G",3
"lib2","SARS-CoV-2","AACACCGTCTCGGGCA",7,1.62,NA,NA,NA,NA,NA,NA,"stop","S29G K94P A105*",3
"lib2","SARS-CoV-2","AACACCGTGCACCGAG",9,49.77,10.32,-0.52,0.05,2.83,1.05,0,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","AACACCGTTGCCGCGC",1,0.23,NA,NA,NA,NA,NA,NA,"stop","A14V V32K T46F D112* C195R",5
"lib2","SARS-CoV-2","AACACCTAAACGAAAC",1,24.83,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","C49Y A89E Y119I L125P P169I",5
"lib2","SARS-CoV-2","AACACCTAGACATAGA",3,44.26,10.03,-0.81,0.05,2.56,1.05,0,">1 nonsynonymous","P7L D90T",2
"lib2","SARS-CoV-2","AACACCTCTTTCCTCG",8,124.85,10.16,-0.67,0.03,2.95,1,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","AACACCTGAATCCTAC",4,10.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R27M V103H S200I",3
"lib2","SARS-CoV-2","AACACCTTTCGCTCCG",4,133.27,9.61,-1.23,0.07,2.33,1.07,0,">1 nonsynonymous","N4G V37L S45E D98S G116E G152F",6
"lib2","SARS-CoV-2","AACACCTTTTGCCTGG",18,252.73,10.57,-0.27,0.03,2.88,1.1,0,">1 nonsynonymous","K56F S129R",2
"lib2","SARS-CoV-2","AACACGAAAAAAATAC",1,26.78,10.82,-0.02,0.07,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACGAAAATTCGCA",1,21.39,10.5,-0.33,0.06,2.93,1.03,0,">1 nonsynonymous","T63D Q168S",2
"lib2","SARS-CoV-2","AACACGAAAGCTCTCA",4,71.98,10.83,0,0.04,2.97,1.05,0,">1 nonsynonymous","R16D E141T K198S",3
"lib2","SARS-CoV-2","AACACGAACAAGAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59* D90M T201M",3
"lib2","SARS-CoV-2","AACACGAAGCGGTCGC",4,50.87,9.48,-1.36,0.13,1.94,1.05,0.01,">1 nonsynonymous","L60V N107R E141T K199M",4
"lib2","SARS-CoV-2","AACACGAATCAAGCCG",5,58.54,10.67,-0.17,0.04,2.93,1.07,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","AACACGAATGGCGCAG",1,125.87,9.23,-1.6,0.05,2.84,1.07,0,">1 nonsynonymous","N109H V115A Q176H",3
"lib2","SARS-CoV-2","AACACGAGACCGTAAG",3,42.18,8.28,-2.55,0.12,2.67,1.17,0,">1 nonsynonymous","Y39T Y175L",2
"lib2","SARS-CoV-2","AACACGAGACCTTTAG",6,38.14,8.91,-1.92,0.24,1.5,1.01,0.03,">1 nonsynonymous","N4G F12S G83Y",3
"lib2","SARS-CoV-2","AACACGATGTCTCTAT",8,85.99,10.91,0.07,0.08,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACGCAATTACGAA",7,22.61,8.02,-2.82,0.38,1.5,1,0.06,">1 nonsynonymous","D34R K48M G83Y K87F D98I",5
"lib2","SARS-CoV-2","AACACGCACCTACTTA",3,65.83,9.2,-1.64,0.17,1.57,1.14,0.01,">1 nonsynonymous","A18M N30I V37L T148I",4
"lib2","SARS-CoV-2","AACACGCACTAAAACA",7,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42E I88D I142K F185T",4
"lib2","SARS-CoV-2","AACACGCCATACAGGA",13,86.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25I L38E T63S S69R T140V N171M",6
"lib2","SARS-CoV-2","AACACGCGCATACATA",1,54.63,9.12,-1.72,0.05,2.92,1.03,0,">1 nonsynonymous","K56L A105S Y119S",3
"lib2","SARS-CoV-2","AACACGCTATCGGCCT",22,276.72,10.83,0,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACGCTCACATTTG",2,17.14,10.88,0.04,0.06,2.97,1.1,0,">1 nonsynonymous","V37Y K56Q",2
"lib2","SARS-CoV-2","AACACGCTCCGCCCAT",1,16.69,10.96,0.12,0.15,2.85,1.03,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACACGGAAAGGATCC",4,64.96,10.81,-0.03,0.07,3,1.02,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","AACACGGCAGAGATCT",5,0.43,NA,NA,NA,NA,NA,NA,"stop","E10* F62I K128S",3
"lib2","SARS-CoV-2","AACACGGGCACATCTG",5,70.03,10.67,-0.16,0.04,2.85,1.1,0,">1 nonsynonymous","S43C T148F",2
"lib2","SARS-CoV-2","AACACGGGGATATTGA",10,0.95,NA,NA,NA,NA,NA,NA,"stop","C158*",1
"lib2","SARS-CoV-2","AACACGGGGCATGACA",17,199.62,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","G117I Y143S R179H",3
"lib2","SARS-CoV-2","AACACGGTCCCAGTTG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","K56E C158*",2
"lib2","SARS-CoV-2","AACACGTAACTGCTTT",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95T N157Q",2
"lib2","SARS-CoV-2","AACACGTACTAAAATG",8,110.43,7.8,-3.03,0.09,1.94,1.09,0,"1 nonsynonymous","C158T",1
"lib2","SARS-CoV-2","AACACGTGGAATTAAG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","E10R L122* T140Y T148V F156R S200*",6
"lib2","SARS-CoV-2","AACACGTTAAGGCGAA",1,19.42,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9Q S19K Y159I",3
"lib2","SARS-CoV-2","AACACTAAAATTGCCT",5,16.64,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","C6F S41Y N120C C158R G174N",5
"lib2","SARS-CoV-2","AACACTAAAGTCCAAC",2,7.48,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K87R F99K V103M",3
"lib2","SARS-CoV-2","AACACTAAATCAAAAC",7,77.15,10.84,0,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACTAATAAACTGT",3,36.65,7.72,-3.12,0.25,1.5,1.08,0.03,">1 nonsynonymous","N107L G174T",2
"lib2","SARS-CoV-2","AACACTAATGGGTAAA",2,21.02,10.06,-0.77,0.04,2.96,1.01,0,"1 nonsynonymous","Y91W",1
"lib2","SARS-CoV-2","AACACTACAAGACATG",8,23.36,8.8,-2.03,0.2,1.63,1.08,0.02,"1 nonsynonymous","W23E",1
"lib2","SARS-CoV-2","AACACTACTTAAAAGA",9,124.51,10.77,-0.07,0.03,2.9,1.12,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","AACACTACTTGTGTAA",11,218.74,10.11,-0.73,0.04,2.57,1.06,0,">1 nonsynonymous","K56W S108T",2
"lib2","SARS-CoV-2","AACACTAGTACGATAA",1,23.17,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C31F D90Y K114M E135T",4
"lib2","SARS-CoV-2","AACACTAGTTAAATAT",1,11.25,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D112P P177A",2
"lib2","SARS-CoV-2","AACACTAGTTTAAGGG",3,14.49,6,-4.84,2,1.5,1.33,0.05,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","AACACTATAAGCTTGT",3,278.89,10.06,-0.77,0.05,2.61,1.05,0,">1 nonsynonymous","L5R Y178L A190M",3
"lib2","SARS-CoV-2","AACACTATCCACTATA",3,25.81,10.6,-0.23,0.04,2.97,1.02,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","AACACTATGGTATGGG",9,58.54,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y35Q S113L Y123F C150G",4
"lib2","SARS-CoV-2","AACACTATGTTCGGCT",10,2.05,NA,NA,NA,NA,NA,NA,"stop","V71* Y91E I142N F167L",4
"lib2","SARS-CoV-2","AACACTATTACCCAGA",2,32.44,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N1P R124V N157G Q168E",4
"lib2","SARS-CoV-2","AACACTATTAGAAGAG",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S N130F P149L N171L",4
"lib2","SARS-CoV-2","AACACTATTTGGGAAA",4,24.92,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D97T R136G C150Y",3
"lib2","SARS-CoV-2","AACACTCAAACGACAA",1,24.2,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N92L N109F Y123V",3
"lib2","SARS-CoV-2","AACACTCAAATACCAG",2,59.79,10.05,-0.79,0.09,2.21,1.09,0,"1 nonsynonymous","W106H",1
"lib2","SARS-CoV-2","AACACTCAATGAACTA",5,51.78,9.74,-1.09,0.16,1.79,1.04,0.01,"1 nonsynonymous","S69I",1
"lib2","SARS-CoV-2","AACACTCACATATCTC",1,12.05,10.91,0.07,0.07,2.97,1.04,0,">1 nonsynonymous","A42N N58D G155K",3
"lib2","SARS-CoV-2","AACACTCATACTATAA",2,2.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","AACACTCCACCACGGC",11,57.26,9.45,-1.38,0.08,2.05,1.12,0,">1 nonsynonymous","C61I A81Y",2
"lib2","SARS-CoV-2","AACACTCCGGCTGTAA",15,105.59,9.16,-1.67,0.05,1.79,1.05,0,">1 nonsynonymous","K56Y N107S K128L",3
"lib2","SARS-CoV-2","AACACTCCGTAAGTCA",2,27.18,10.83,-0.01,0.09,2.84,1.18,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","AACACTCCTTCTTCAT",2,1.3,NA,NA,NA,NA,NA,NA,"stop","A33T P96* K114* Q163E",4
"lib2","SARS-CoV-2","AACACTCGAAAATGGG",3,15.85,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L38P G174F",2
"lib2","SARS-CoV-2","AACACTCGTATAATAA",2,6.5,7.02,-3.82,2,1.5,1.32,0.05,">1 nonsynonymous","A14C C49P N58A D98I N110K Q168S R179G",7
"lib2","SARS-CoV-2","AACACTCTAGAAGCGT",11,113.23,9.43,-1.41,0.06,1.99,1.08,0,">1 nonsynonymous","T85S V103T G155T",3
"lib2","SARS-CoV-2","AACACTCTTTGCGACG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","N1L F134* G152L",3
"lib2","SARS-CoV-2","AACACTGACTGACTAT",16,207.53,8.69,-2.14,0.18,1.5,1.07,0.01,">1 nonsynonymous","F17S D97L T100Y G174H",4
"lib2","SARS-CoV-2","AACACTGAGGGTAGAA",13,4.12,NA,NA,NA,NA,NA,NA,"stop","P7L V11R D34V S43H W106V Y175* T201W",7
"lib2","SARS-CoV-2","AACACTGATAATAATT",1,40.04,9.61,-1.22,0.07,2.16,1.04,0,">1 nonsynonymous","C6N D34R",2
"lib2","SARS-CoV-2","AACACTGCGAACACAA",5,39.57,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","G83V A89N",2
"lib2","SARS-CoV-2","AACACTGCTCTATGGA",16,153.02,9.06,-1.78,0.06,2.88,1.11,0,">1 nonsynonymous","Y119E S129M",2
"lib2","SARS-CoV-2","AACACTGGAGACTACT",5,81.45,9.86,-0.98,0.08,2.04,1.06,0,">1 nonsynonymous","F8W A67Y V182I",3
"lib2","SARS-CoV-2","AACACTGGCGGCACCC",1,17.21,11.08,0.24,0.07,2.96,1.05,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","AACACTGGGAAGAAAA",4,7.01,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6Y T15S V103R K132S N171R",5
"lib2","SARS-CoV-2","AACACTGGTGAAGTGA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","T15V V115*",2
"lib2","SARS-CoV-2","AACACTGTCGAACAAG",7,39.11,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L95R W106G Y119S I142L",4
"lib2","SARS-CoV-2","AACACTGTCGCTGACT",5,172.13,6.32,-4.52,0.56,1.5,1.24,0.02,">1 nonsynonymous","Y39F C49G",2
"lib2","SARS-CoV-2","AACACTGTGCGCTTGT",3,107.26,10.75,-0.09,0.04,2.89,1.11,0,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","AACACTTAACAGAAAA",4,53.6,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R127P R136K P149N",3
"lib2","SARS-CoV-2","AACACTTAACAGAAAG",2,0.32,NA,NA,NA,NA,NA,NA,"stop","L5P N107I P149Y V181*",4
"lib2","SARS-CoV-2","AACACTTAAGAGCATA",3,9.71,6.66,-4.18,0.61,1.5,1.13,0.04,">1 nonsynonymous","F12E V153Y P169M L188T",4
"lib2","SARS-CoV-2","AACACTTACAAAGACA",2,35.87,10.82,-0.01,0.07,2.91,1.07,0,"1 nonsynonymous","A42V",1
"lib2","SARS-CoV-2","AACACTTACACAAGCA",1,22.59,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N130W G172E",2
"lib2","SARS-CoV-2","AACACTTACTATTCTG",2,5.74,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","I104E N118H Y123S",3
"lib2","SARS-CoV-2","AACACTTAGGCAAAAA",1,18.31,6,-4.84,2,1.5,1.34,0.08,">1 nonsynonymous","I72C G83L W106R N120P N130L",5
"lib2","SARS-CoV-2","AACACTTCCCCAGACA",6,53.63,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A14V D97H P177Y",3
"lib2","SARS-CoV-2","AACACTTGAAACCAGT",4,41.25,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","S113L Q144L T170L",3
"lib2","SARS-CoV-2","AACACTTGAATAGAAC",3,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K C49S L57V",3
"lib2","SARS-CoV-2","AACACTTGACTATGCC",3,6.96,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K114W G155E V180W E186F",4
"lib2","SARS-CoV-2","AACACTTGCATAATAC",4,48.67,9.1,-1.73,0.05,3,1.02,0,">1 nonsynonymous","S29N G174I",2
"lib2","SARS-CoV-2","AACACTTGGTTCATAA",5,38.98,10.84,0,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACTTTACACCGGT",12,139.35,9.81,-1.03,0.08,2.12,1.05,0,">1 nonsynonymous","D98H Y121N E154R",3
"lib2","SARS-CoV-2","AACACTTTGAACTCTA",2,15.17,10.82,-0.02,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AACACTTTTTCAAGAA",5,56.96,9.98,-0.86,0.07,2.49,1.04,0,"1 nonsynonymous","V181L",1
"lib2","SARS-CoV-2","AACAGAAAATGCTATT",2,25.08,10.77,-0.06,0.08,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGAAAGACCTTTT",1,3.37,NA,NA,NA,NA,NA,NA,"stop","C6I V103* P133L Y178*",4
"lib2","SARS-CoV-2","AACAGAAAGTTCCCTG",5,96.33,10.37,-0.46,0.04,2.9,1.03,0,">1 nonsynonymous","I2S N24E Y66W R136L",4
"lib2","SARS-CoV-2","AACAGAAATAATGATT",5,27.39,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F47N F62L G146V",3
"lib2","SARS-CoV-2","AACAGAAATAGATACA",7,38.91,9.88,-0.95,0.17,2.19,1.13,0.01,">1 nonsynonymous","K48G T140E",2
"lib2","SARS-CoV-2","AACAGAAATCGCGCAA",14,95.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G83H Y119E L162G",3
"lib2","SARS-CoV-2","AACAGAAATGCTACGC",13,253.71,10.19,-0.65,0.05,2.85,1.02,0,">1 nonsynonymous","V11I Y35P G51K",3
"lib2","SARS-CoV-2","AACAGAACAAACGATC",1,40.72,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","C49M I104L N110A Y178I",4
"lib2","SARS-CoV-2","AACAGAACAAGATCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N64P G74C R78H I104* F134I",5
"lib2","SARS-CoV-2","AACAGAACAAGTAGAG",3,13.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D68N T85V A89V I138R N151V",5
"lib2","SARS-CoV-2","AACAGAACACGATGCA",14,0.45,NA,NA,NA,NA,NA,NA,"stop","T15M V65S L125R K199*",4
"lib2","SARS-CoV-2","AACAGAACACTAAAAG",4,2.29,NA,NA,NA,NA,NA,NA,"stop","A42S N120*",2
"lib2","SARS-CoV-2","AACAGAACATAATGAT",2,5.14,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","AACAGAACTAGAGAAA",4,32.5,10.81,-0.03,0.05,2.93,1.09,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","AACAGAACTGGCCCAT",9,58.12,6.37,-4.47,0.48,1.5,1.17,0.01,">1 nonsynonymous","L5Y S41E P54N G101P Y143G K198Q",6
"lib2","SARS-CoV-2","AACAGAACTTCGACAC",4,179.87,10.38,-0.45,0.03,2.87,1.03,0,">1 nonsynonymous","N13T A42F",2
"lib2","SARS-CoV-2","AACAGAAGATAATCAT",5,94.65,10.71,-0.13,0.06,2.85,1.1,0,">1 nonsynonymous","Q144H T201K",2
"lib2","SARS-CoV-2","AACAGAAGCGCATGGA",3,38.62,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","W23G D34R L60R I138L T148R Y159G V173W",7
"lib2","SARS-CoV-2","AACAGAAGTATATCAC",1,9.24,8.65,-2.19,0.23,1.61,1.16,0.02,">1 nonsynonymous","S69L T140I",2
"lib2","SARS-CoV-2","AACAGAAGTCATACTA",4,141.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y143N C150D",2
"lib2","SARS-CoV-2","AACAGAATAAGATACC",7,151.75,10.82,-0.02,0.02,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGAATATAAAATA",3,69.61,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D68G P82M I104V K132G",4
"lib2","SARS-CoV-2","AACAGAATATTAATAA",1,7.71,9.49,-1.35,0.12,2.35,1,0,">1 nonsynonymous","C6Y C61S Q84L",3
"lib2","SARS-CoV-2","AACAGAATATTCATTC",11,19.19,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I88R P96M",2
"lib2","SARS-CoV-2","AACAGAATCGATTAAA",7,45.7,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S45I C61I I88Q G166Y",4
"lib2","SARS-CoV-2","AACAGAATGCTCTCAA",7,31.76,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C6S V20G N92S L131S S139L F156L",6
"lib2","SARS-CoV-2","AACAGAATGGTATAAA",3,28.44,10.82,-0.02,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGAATTAGAACAA",5,27.12,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","I28S G101H I142L C158A",4
"lib2","SARS-CoV-2","AACAGAATTCCCGTTA",1,5.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F K94E S129Y F167I",4
"lib2","SARS-CoV-2","AACAGAATTTTTATGA",2,0.64,NA,NA,NA,NA,NA,NA,"stop","V37S K48* R124T T148S",4
"lib2","SARS-CoV-2","AACAGACACCATATAA",14,223.96,10.78,-0.06,0.03,2.93,1.05,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","AACAGACAGTCAGCAA",2,38.27,10.81,-0.02,0.06,3,1.01,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","AACAGACATATTTAAA",2,12.86,6,-4.84,2,3,1.29,0.02,">1 nonsynonymous","V11P I142S E154W",3
"lib2","SARS-CoV-2","AACAGACCAGTACCCT",10,1.65,NA,NA,NA,NA,NA,NA,"stop","A22K A42I R136* I142V F167M",5
"lib2","SARS-CoV-2","AACAGACGCGGACACG",4,122.11,10.53,-0.31,0.03,2.95,1.05,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","AACAGACTATTTGAAC",4,65.69,10.75,-0.08,0.05,2.9,1.12,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","AACAGACTCGTATTAG",1,7.02,6,-4.84,1.19,3,1,0,"1 nonsynonymous","V181G",1
"lib2","SARS-CoV-2","AACAGACTCTTGATGT",4,71.08,8.27,-2.57,0.11,2.34,1.15,0,">1 nonsynonymous","S113R A190V",2
"lib2","SARS-CoV-2","AACAGACTGTAAGTAA",5,43.75,8.44,-2.4,0.17,1.5,1.05,0.02,">1 nonsynonymous","V77E V115H",2
"lib2","SARS-CoV-2","AACAGACTTAAGGGGC",1,13.31,11.09,0.25,0.07,2.96,1.03,0,">1 nonsynonymous","N1G G9E",2
"lib2","SARS-CoV-2","AACAGAGAAGTTTTGA",12,5.17,NA,NA,NA,NA,NA,NA,"stop","N1R T15M P54S G155*",4
"lib2","SARS-CoV-2","AACAGAGAGCATATTT",7,15.02,10.76,-0.08,0.13,2.98,1.03,0.01,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","AACAGAGATGTAAAAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACAGAGATTTTATCG",1,22.4,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A67N G155V K199C",3
"lib2","SARS-CoV-2","AACAGAGCATACAACA",1,17.9,10.24,-0.59,0.1,2.83,1.16,0.01,">1 nonsynonymous","R16C Q144K",2
"lib2","SARS-CoV-2","AACAGAGCGTAACTAA",5,75.91,10.62,-0.21,0.03,2.95,1.03,0,">1 nonsynonymous","I2V P7H Y35W E135H",4
"lib2","SARS-CoV-2","AACAGAGGACGCTGAT",9,136.74,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L95R T148M Y175T",3
"lib2","SARS-CoV-2","AACAGAGTACGTAAAT",2,47.03,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","L5D C31Q N64R D137T S147P",5
"lib2","SARS-CoV-2","AACAGAGTCCCTATTG",5,14.64,6,-4.84,2,3,1.27,0.03,">1 nonsynonymous","N13F A18V T55L F99I A105T",5
"lib2","SARS-CoV-2","AACAGAGTTCGAAATT",5,31.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36M N58Y C150D",3
"lib2","SARS-CoV-2","AACAGATAAATATCAG",2,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E F44N P96L L111I A190L",5
"lib2","SARS-CoV-2","AACAGATAAGAGATAC",1,8.31,9.28,-1.56,0.09,2.92,1.08,0,">1 nonsynonymous","T46L S53K Y119V",3
"lib2","SARS-CoV-2","AACAGATAATCTTGTT",3,30.15,10.14,-0.69,0.02,3,1.01,0,"1 nonsynonymous","G166S",1
"lib2","SARS-CoV-2","AACAGATACCGTCTAT",9,43.94,7.01,-3.83,0.54,1.5,1.09,0.05,">1 nonsynonymous","N1P K48T D68G K94L Y119A",5
"lib2","SARS-CoV-2","AACAGATATAAGGACT",3,32.09,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","T46P D68A Q163L S184T",4
"lib2","SARS-CoV-2","AACAGATATACAGACT",3,34.84,8.85,-1.99,0.25,1.5,1,0.03,">1 nonsynonymous","S69L A81S",2
"lib2","SARS-CoV-2","AACAGATATGGCCTAA",4,17.43,6.07,-4.77,1.82,1.5,1.19,0.06,">1 nonsynonymous","G9W Y93G",2
"lib2","SARS-CoV-2","AACAGATCATCATTTG",3,42.03,9.04,-1.79,0.08,2.56,1.09,0,">1 nonsynonymous","C6W A145E",2
"lib2","SARS-CoV-2","AACAGATCGATTTTCT",6,36.42,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G101H Q168T",2
"lib2","SARS-CoV-2","AACAGATCTTTACCTA",15,357.03,8.49,-2.35,0.09,2.81,1.08,0,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","AACAGATGAACTACCA",10,54.72,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V103P R124N Y175S",3
"lib2","SARS-CoV-2","AACAGATGCTCTGAAA",6,131.92,10.76,-0.07,0.04,2.93,1.08,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","AACAGATTAATTTAAA",12,281.11,10.84,0,0.04,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACAGATTATCGATAT",6,84.55,9.03,-1.81,0.06,2.85,1.12,0,">1 nonsynonymous","T55I G174V",2
"lib2","SARS-CoV-2","AACAGATTATGGGTAA",2,86.27,10.57,-0.27,0.04,2.92,1.05,0,">1 nonsynonymous","S43M S139M",2
"lib2","SARS-CoV-2","AACAGATTATTCGATA",13,200.96,10.11,-0.72,0.03,2.84,1.04,0,">1 nonsynonymous","C6S A42T",2
"lib2","SARS-CoV-2","AACAGATTTGCAACCA",5,29.33,9.31,-1.52,0.07,2.4,1.04,0,">1 nonsynonymous","S53G Q144L",2
"lib2","SARS-CoV-2","AACAGATTTTGCATGG",2,17.46,10.13,-0.71,0.08,2.7,1.04,0,"1 nonsynonymous","R127S",1
"lib2","SARS-CoV-2","AACAGCAAACCTAACG",1,3.96,NA,NA,NA,NA,NA,NA,"stop","S41A C61T D68K Y91* K132* V153M",6
"lib2","SARS-CoV-2","AACAGCAAACCTGGAC",11,106.74,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40G C61F L95R F99P Y119I S139L",6
"lib2","SARS-CoV-2","AACAGCAAATGATACT",8,163.61,10.21,-0.62,0.03,2.81,1.04,0,">1 nonsynonymous","L5F F17M",2
"lib2","SARS-CoV-2","AACAGCAACTGGTAGC",3,0.8,NA,NA,NA,NA,NA,NA,"stop","V11* Y35L G166R",3
"lib2","SARS-CoV-2","AACAGCAAGCATCTGG",1,33.62,8.8,-2.04,0.17,1.89,1.07,0.02,"1 nonsynonymous","Y50L",1
"lib2","SARS-CoV-2","AACAGCACACCCCAAT",5,86,10.83,0,0.05,2.9,1.11,0,">1 nonsynonymous","S129T T201R",2
"lib2","SARS-CoV-2","AACAGCACAGCAATTC",4,10.76,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86N G101S I138L G174F R179G",5
"lib2","SARS-CoV-2","AACAGCACCTAAACAA",5,64.36,10.67,-0.17,0.04,2.96,1.05,0,">1 nonsynonymous","D97H P149N V153S",3
"lib2","SARS-CoV-2","AACAGCACGAAAAAAC",4,66.74,10.76,-0.07,0.02,2.98,1.04,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","AACAGCACTTAGACGG",17,339.98,10.41,-0.43,0.03,2.86,1.07,0,">1 nonsynonymous","S69A T201L",2
"lib2","SARS-CoV-2","AACAGCAGAAACAACA",3,31.04,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","P96L T100E D112H L122M C158Y",5
"lib2","SARS-CoV-2","AACAGCATCATAGAGT",6,141.92,9.45,-1.38,0.05,2.91,1.1,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","AACAGCATCTGTTTTG",8,52.43,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","AACAGCATGCGTACCG",2,34.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N92K I142K",2
"lib2","SARS-CoV-2","AACAGCCAAGTCACAA",6,124.55,10.71,-0.13,0.03,2.96,1.06,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","AACAGCCACAAGAAAC",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73K A105E S113I C158F",4
"lib2","SARS-CoV-2","AACAGCCATCCATTTG",2,57.81,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D59N N64S Y123P T148S T201M",5
"lib2","SARS-CoV-2","AACAGCCCAACGATTG",4,63.91,10.82,-0.01,0.08,2.82,1.09,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","AACAGCCGATGATAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","K87* V103T L188P",3
"lib2","SARS-CoV-2","AACAGCCGCACCATAC",3,41.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14K S19N T55V D90N G152L G174L",6
"lib2","SARS-CoV-2","AACAGCCGCCGACCGA",2,3.37,NA,NA,NA,NA,NA,NA,"stop","G116P Y143*",2
"lib2","SARS-CoV-2","AACAGCCTAAGACAAA",2,2.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACAGCCTAGGACCGG",7,39.56,6,-4.84,1.59,1.5,1.17,0.03,">1 nonsynonymous","T55E D112G K128G",3
"lib2","SARS-CoV-2","AACAGCCTCCTAGTCT",9,148.9,9.5,-1.34,0.04,2.84,1.12,0,">1 nonsynonymous","N118H Q168S",2
"lib2","SARS-CoV-2","AACAGCGAATTATCAG",7,49.41,8.22,-2.62,0.21,1.5,1.12,0.02,">1 nonsynonymous","I88A E154S",2
"lib2","SARS-CoV-2","AACAGCGAGTGTCTAA",3,39.3,9,-1.83,0.1,1.62,1.04,0,">1 nonsynonymous","D90F S139F",2
"lib2","SARS-CoV-2","AACAGCGCACGCACCA",1,22.49,10.76,-0.08,0.05,2.9,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGCGGTGTAACAG",14,151.75,8.73,-2.1,0.27,1.5,1,0.03,">1 nonsynonymous","G83D A89R",2
"lib2","SARS-CoV-2","AACAGCGTGACATCAA",10,53.17,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55Y F62M L95N G152S",4
"lib2","SARS-CoV-2","AACAGCTATTGTATCC",4,20.33,8.61,-2.23,0.14,2.25,1.04,0.01,">1 nonsynonymous","I2S A14R C61T G155L",4
"lib2","SARS-CoV-2","AACAGCTGATTGAACC",12,8.04,10.48,-0.36,0.23,2.61,1.11,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AACAGCTTGCAAATGA",5,7.97,NA,NA,NA,NA,NA,NA,"stop","F8K Y35* V173S",3
"lib2","SARS-CoV-2","AACAGCTTTAAAATTT",10,94.91,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","I2Y G9I P82S D98A",4
"lib2","SARS-CoV-2","AACAGGAAAATCAAGA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","F99S Y123H S139T Y165*",4
"lib2","SARS-CoV-2","AACAGGAAATGCTTAA",7,27.6,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F8G L60V Y91R",3
"lib2","SARS-CoV-2","AACAGGAATTTACAAG",1,5.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17Y F70A N171Y T201S",4
"lib2","SARS-CoV-2","AACAGGACATGATCCA",15,183.75,6,-4.84,1.28,1.5,1.13,0,">1 nonsynonymous","V37R N58K Q79E Q84S N151Y P161N F167M",7
"lib2","SARS-CoV-2","AACAGGACCAATAAGT",12,100.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D90G Y143C G146V C158I",4
"lib2","SARS-CoV-2","AACAGGACCATCTATC",12,1.03,NA,NA,NA,NA,NA,NA,"stop","V103* S113L",2
"lib2","SARS-CoV-2","AACAGGACTTAATACG",2,2.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174Q",1
"lib2","SARS-CoV-2","AACAGGAGATAGAAAA",7,74.05,10.81,-0.03,0.05,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGGAGCAATCTCA",4,83.26,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F8R I88M E141M Y175D",4
"lib2","SARS-CoV-2","AACAGGAGTAAGCCCA",3,7.33,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","S19Q W106L H189L",3
"lib2","SARS-CoV-2","AACAGGATCCCACCAA",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Y G86S V103L T140P P161T",5
"lib2","SARS-CoV-2","AACAGGATGTTTAATA",1,5.16,10.74,-0.1,0.18,2.78,1.24,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACAGGCAAAACTGTT",3,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","AACAGGCAAGAACAAG",2,3.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","AACAGGCAATCATAAC",2,13.9,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Q84H L95S I104F",3
"lib2","SARS-CoV-2","AACAGGCCAAACATTT",30,565.63,10.91,0.08,0.04,2.92,1.08,0,"1 nonsynonymous","P197F",1
"lib2","SARS-CoV-2","AACAGGCCAGATAGAT",5,36.11,9.34,-1.49,0.12,1.78,1.12,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","AACAGGCCCACAATTG",9,60.95,8.31,-2.52,0.13,2.15,1.06,0.01,"1 nonsynonymous","D112M",1
"lib2","SARS-CoV-2","AACAGGCCCGTAAAAG",13,109.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5P V32I A89S R124A I142E F167T",6
"lib2","SARS-CoV-2","AACAGGCCGCAAGTCG",5,19.21,6,-4.84,1.4,1.5,1.12,0.02,">1 nonsynonymous","T15C G86L D97T L131W",4
"lib2","SARS-CoV-2","AACAGGCCTTTGGATA",9,221.51,6.28,-4.56,0.34,1.5,1.16,0.01,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","AACAGGCGCGATCCAG",4,60.96,10.66,-0.17,0.03,2.96,1.06,0,">1 nonsynonymous","A22E L122V",2
"lib2","SARS-CoV-2","AACAGGCGTCTCATTA",1,32.83,10.08,-0.75,0.08,2.49,1.04,0,">1 nonsynonymous","D34I T55G K114R S200E",4
"lib2","SARS-CoV-2","AACAGGCGTTAAATGG",3,1.07,NA,NA,NA,NA,NA,NA,"stop","R127* P133A S184F",3
"lib2","SARS-CoV-2","AACAGGCTAAAAAAGT",17,83.3,6,-4.84,1.21,2.61,1.17,0,">1 nonsynonymous","N58I R127G C150S",3
"lib2","SARS-CoV-2","AACAGGCTAGCAACAG",4,64.1,10.42,-0.42,0.06,2.88,1.1,0,">1 nonsynonymous","P7I S45D",2
"lib2","SARS-CoV-2","AACAGGGATGAAAAAA",8,26.06,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49G F160I",2
"lib2","SARS-CoV-2","AACAGGGCAGGAACTA",10,108.15,9.87,-0.96,0.07,2,1.03,0,"1 nonsynonymous","C49M",1
"lib2","SARS-CoV-2","AACAGGGCCTTGCTAT",2,28.94,9.34,-1.5,0.17,1.73,1.08,0.01,">1 nonsynonymous","S43C T85M Y91V",3
"lib2","SARS-CoV-2","AACAGGGCTAATCATT",2,70.81,10.72,-0.12,0.05,2.97,1.06,0,">1 nonsynonymous","C61M T201H",2
"lib2","SARS-CoV-2","AACAGGGCTTACTAAA",5,117.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38T N120S R127E Y165N G172R",5
"lib2","SARS-CoV-2","AACAGGGTCAATAACT",3,8.7,6,-4.84,2,1.5,1.02,0.01,">1 nonsynonymous","L5V L38R C150L",3
"lib2","SARS-CoV-2","AACAGGGTCGATTCAA",6,43.01,9.1,-1.74,0.13,1.77,1.14,0.01,">1 nonsynonymous","Y121S F134S",2
"lib2","SARS-CoV-2","AACAGGGTGCGTTTCA",3,53.37,10.7,-0.13,0.05,2.96,1.06,0,"1 nonsynonymous","P54G",1
"lib2","SARS-CoV-2","AACAGGTACAAAGTAT",8,1.08,NA,NA,NA,NA,NA,NA,"stop","R27I Q79L D112E G166A F185*",5
"lib2","SARS-CoV-2","AACAGGTAGTCATATT",3,20.62,10.5,-0.34,0.11,2.84,1.14,0.01,">1 nonsynonymous","L5K G152F",2
"lib2","SARS-CoV-2","AACAGGTGAGCCTCAC",4,28.95,10.21,-0.63,0.11,2.75,1.02,0.01,">1 nonsynonymous","S36L T63D L125A",3
"lib2","SARS-CoV-2","AACAGGTGCGAAACGG",1,8.28,6,-4.84,2,3,1.03,0,">1 nonsynonymous","E76R S139N",2
"lib2","SARS-CoV-2","AACAGGTTAAACCCCG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","E10W F99L N110* N157L R179G",5
"lib2","SARS-CoV-2","AACAGGTTCAAGGCAG",3,1.32,NA,NA,NA,NA,NA,NA,"stop","Y50C Y66* A105Y V153N T201V",5
"lib2","SARS-CoV-2","AACAGTAAACGCGTAC",14,36.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L I80M S200P",3
"lib2","SARS-CoV-2","AACAGTAAAGATTAAG",5,34.4,10.55,-0.29,0.04,2.88,1.14,0,"1 nonsynonymous","K87C",1
"lib2","SARS-CoV-2","AACAGTAAAGTGCCAA",2,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y D90L D97Y V103M S139K S184D L188C",7
"lib2","SARS-CoV-2","AACAGTAAATGGGTCA",12,76.94,8.85,-1.99,0.14,1.74,1.11,0.01,">1 nonsynonymous","F12L K48R A89Y T201K",4
"lib2","SARS-CoV-2","AACAGTAAGTTGGAGG",4,79.85,9.43,-1.4,0.08,2.15,1.07,0,">1 nonsynonymous","P96T P149H F156V",3
"lib2","SARS-CoV-2","AACAGTACATAGTAGC",9,58.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D34K R73I K128L N151Y",4
"lib2","SARS-CoV-2","AACAGTACGCACTGAC",3,34.33,9.74,-1.1,0.09,2.82,1.02,0,">1 nonsynonymous","Q144L P191T",2
"lib2","SARS-CoV-2","AACAGTACGTACCACA",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81M T85W K114L I138W F167P",5
"lib2","SARS-CoV-2","AACAGTACTGTATCGA",1,19.48,10.18,-0.66,0.05,2.89,1,0,">1 nonsynonymous","V115P E141L P149C",3
"lib2","SARS-CoV-2","AACAGTAGAATTTCAG",5,1.93,NA,NA,NA,NA,NA,NA,"stop","T3* A14R D90Y Y119K Y143T",5
"lib2","SARS-CoV-2","AACAGTAGGAAATGAA",9,42.87,10.11,-0.72,0.11,2.6,1.05,0,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","AACAGTAGGAACAGAC",16,206.87,10.57,-0.27,0.03,2.91,1.06,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AACAGTAGGCGGACAC",5,39.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23K G74T V103S S113K Y119K K199N",6
"lib2","SARS-CoV-2","AACAGTAGGGCACAGT",2,18.87,10.28,-0.55,0.1,2.83,1.02,0,">1 nonsynonymous","E10R S43R I138G",3
"lib2","SARS-CoV-2","AACAGTAGTACTGGGC",1,2.8,NA,NA,NA,NA,NA,NA,"stop","K87C E135* T148E",3
"lib2","SARS-CoV-2","AACAGTATAATCAAGA",7,122.57,6,-4.84,2,2.03,1.17,0,">1 nonsynonymous","S43H A105H P161L",3
"lib2","SARS-CoV-2","AACAGTATAGAAGATG",3,72.64,10.65,-0.18,0.03,2.9,1.04,0,">1 nonsynonymous","N109R E135G",2
"lib2","SARS-CoV-2","AACAGTATAGCTAATA",2,16.43,10.47,-0.36,0.07,2.93,1.02,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","AACAGTATAGGGGATC",24,9.85,NA,NA,NA,NA,NA,NA,"stop","N4V V115* K132N P161L",4
"lib2","SARS-CoV-2","AACAGTCACAGTTAAA",8,105.02,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y143D G166K L188Y",3
"lib2","SARS-CoV-2","AACAGTCACATAGATG",8,101.5,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5A Y39K S45V L57S Y121I N151S L162C",7
"lib2","SARS-CoV-2","AACAGTCAGGGATGAA",5,32.18,8.96,-1.88,0.3,1.5,1.11,0.04,">1 nonsynonymous","C49L D75K E154S",3
"lib2","SARS-CoV-2","AACAGTCCCTTAGAAA",2,56.42,10.65,-0.19,0.03,3,1,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","AACAGTCCGACTGGAT",3,38.28,6,-4.84,1.72,1.5,1.15,0.03,">1 nonsynonymous","F17K Y123S K132C G155T S184V",5
"lib2","SARS-CoV-2","AACAGTCCTACTCGTT",5,54.3,7.12,-3.71,0.39,1.5,1.16,0.03,">1 nonsynonymous","P96R A105M",2
"lib2","SARS-CoV-2","AACAGTCGAATAAGGC",5,154.78,8.26,-2.57,0.09,1.89,1.07,0,">1 nonsynonymous","C6L Q176M",2
"lib2","SARS-CoV-2","AACAGTCGCGACCCCC",6,57.06,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5R S41N G116A F156L G172S",5
"lib2","SARS-CoV-2","AACAGTCGTATTCGTA",2,100.22,10.71,-0.13,0.03,2.98,1.02,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","AACAGTCGTATTTTGA",9,210.25,9.59,-1.25,0.04,2.03,1.03,0,">1 nonsynonymous","F44S Y178S",2
"lib2","SARS-CoV-2","AACAGTCTATAGCTGT",7,52.98,6,-4.84,2,3,1.17,0,">1 nonsynonymous","W23T V103A G155N R179S",4
"lib2","SARS-CoV-2","AACAGTCTGGGCACGC",14,177.62,9.96,-0.88,0.06,2.13,1.03,0,">1 nonsynonymous","N24M L60A D97F",3
"lib2","SARS-CoV-2","AACAGTGAACCCTAAG",6,7.11,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C6F A33S C49N L57V I142S",5
"lib2","SARS-CoV-2","AACAGTGAACTTTAAA",4,56.79,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9I D68L K87G D97K A105F G155S F167K",7
"lib2","SARS-CoV-2","AACAGTGAAGTGCATG",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90F F126L T148S",3
"lib2","SARS-CoV-2","AACAGTGAATTGTCAA",4,87.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1I Y39S Y119N Y143P",4
"lib2","SARS-CoV-2","AACAGTGACACCTTCG",10,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10C A105S F160Y",3
"lib2","SARS-CoV-2","AACAGTGAGCCTATAG",8,45.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17S L38H C61Y Q168L",4
"lib2","SARS-CoV-2","AACAGTGAGTGCGGGC",7,44.73,10.88,0.05,0.07,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGTGCTTTTCACT",2,107.73,10.76,-0.07,0.05,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGTGTATTAGAGG",2,15.86,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2S G51F C158G",3
"lib2","SARS-CoV-2","AACAGTGTCCTAGATT",8,65.4,8.28,-2.56,0.15,1.5,1.11,0.01,">1 nonsynonymous","N58K I104W D112L V153L",4
"lib2","SARS-CoV-2","AACAGTGTTAAGAATT",5,90.4,9.91,-0.93,0.06,2.26,1.03,0,">1 nonsynonymous","K56L Q79T",2
"lib2","SARS-CoV-2","AACAGTTAAAAAAGAA",2,58.74,10.39,-0.45,0.05,2.94,1.03,0,">1 nonsynonymous","G83Y P133S",2
"lib2","SARS-CoV-2","AACAGTTAAAACCTTA",7,19.02,8.91,-1.92,0.26,1.61,1.21,0.04,">1 nonsynonymous","S45K T55W Y121S",3
"lib2","SARS-CoV-2","AACAGTTAAAGGTGCA",2,76.99,8.09,-2.74,0.15,1.69,1.05,0.01,">1 nonsynonymous","F44I Y119W E141L N151T",4
"lib2","SARS-CoV-2","AACAGTTAAATATCAA",6,123.46,10.67,-0.16,0.03,2.9,1.1,0,"1 nonsynonymous","H189C",1
"lib2","SARS-CoV-2","AACAGTTATAAGTGGA",5,75.38,8.22,-2.62,0.11,2.85,1.07,0,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","AACAGTTCAACGCTCG",3,19.36,6,-4.84,1.41,1.5,1.1,0.01,">1 nonsynonymous","W23P C49I G146K",3
"lib2","SARS-CoV-2","AACAGTTCATCTCGAC",6,51.38,10.81,-0.02,0.07,2.87,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGTTCCCACGGTA",4,28.62,10.74,-0.1,0.04,2.8,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","AACAGTTCCCCGGCTA",1,18.45,8.27,-2.56,0.27,1.5,1.01,0.05,">1 nonsynonymous","Y35H T55C E135H I142T",4
"lib2","SARS-CoV-2","AACAGTTCTTGACAAA",4,19.62,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F47S D112W K128S",3
"lib2","SARS-CoV-2","AACAGTTGCTGAGCCG",5,56.91,9.35,-1.48,0.11,1.74,1.08,0.01,"1 nonsynonymous","L162K",1
"lib2","SARS-CoV-2","AACAGTTTCTGGAACT",6,27.04,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","I28P S45C G101L P133Y",4
"lib2","SARS-CoV-2","AACATAAAAAATCATA",6,82.38,10.87,0.03,0.06,2.94,1.05,0,">1 nonsynonymous","N110D T201L",2
"lib2","SARS-CoV-2","AACATAAAACGCACTA",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101A E141G",2
"lib2","SARS-CoV-2","AACATAAAATGTCACG",6,21.07,6,-4.84,2,1.5,1.2,0.03,"1 nonsynonymous","I88N",1
"lib2","SARS-CoV-2","AACATAAAATTAAGTA",3,21.64,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","S41D E76Y G83I N157V V182T",5
"lib2","SARS-CoV-2","AACATAAACTCAAAGA",11,53.57,9.8,-1.04,0.09,2.47,1.06,0,"1 nonsynonymous","D34M",1
"lib2","SARS-CoV-2","AACATAAAGAAGCAGT",13,32.24,6.39,-4.45,0.31,2.14,1.31,0.01,">1 nonsynonymous","D90L G116L V180S",3
"lib2","SARS-CoV-2","AACATAAAGTAATCAA",3,28.98,6,-4.84,1.93,1.5,1.12,0.01,">1 nonsynonymous","Y165G R179P",2
"lib2","SARS-CoV-2","AACATAAATAACATAC",5,43.63,10.79,-0.05,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATAAATACACGGT",8,134.23,6,-4.84,1.64,1.95,1.12,0,">1 nonsynonymous","N4L Y35E V71S I104F Q176M",5
"lib2","SARS-CoV-2","AACATAAATTGCGACG",10,93.78,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50L L60V S164I",3
"lib2","SARS-CoV-2","AACATAAATTTCTAAA",21,214.99,10.84,0,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATAACACTCAATC",2,29.4,10.35,-0.49,0.12,2.73,1.03,0.01,">1 nonsynonymous","D90S N118Q Q163Y",3
"lib2","SARS-CoV-2","AACATAACCACATTAA",3,37.58,10.8,-0.03,0.07,2.83,1.19,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","AACATAACCGTATAAC",1,8.86,10.82,-0.02,0.1,2.96,1.08,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","AACATAACGTAATTTT",4,53.94,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G155L Y165S",2
"lib2","SARS-CoV-2","AACATAACTATTTTTA",2,12.4,9.08,-1.75,0.2,3,1.08,0,">1 nonsynonymous","P96A T170H",2
"lib2","SARS-CoV-2","AACATAACTGTGCCTG",2,27.1,10.81,-0.03,0.04,2.96,1.06,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","AACATAAGAACAGATT",3,12.55,8.65,-2.18,0.14,2.72,1,0.01,">1 nonsynonymous","D59Q P96A V115R Q168L",4
"lib2","SARS-CoV-2","AACATAAGACATAACG",12,235.95,10.4,-0.44,0.03,2.89,1.05,0,">1 nonsynonymous","D59L P149L",2
"lib2","SARS-CoV-2","AACATAAGACCCTCTA",3,24.64,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","F12I V37A Y93A A105L",4
"lib2","SARS-CoV-2","AACATAAGAGAAAACT",7,56.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N C61F R124M C158I",4
"lib2","SARS-CoV-2","AACATAAGAGCTCAGC",2,4.28,NA,NA,NA,NA,NA,NA,"stop","C6L F12E D90T D137* Q168Y",5
"lib2","SARS-CoV-2","AACATAAGAGTTCAAC",3,20.35,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","Y93T",1
"lib2","SARS-CoV-2","AACATAAGGGTTTGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","I28L S41R D98A N107* V173F",5
"lib2","SARS-CoV-2","AACATAAGGTATTACA",16,278.87,10.41,-0.42,0.04,2.89,1.07,0,"1 nonsynonymous","N118E",1
"lib2","SARS-CoV-2","AACATAAGTAAACCTA",8,91.89,10.88,0.04,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATAATAAACAATA",7,46.63,6.04,-4.79,1.45,1.5,1.3,0.04,">1 nonsynonymous","Y50S D137N",2
"lib2","SARS-CoV-2","AACATAATAAATTATA",6,68.16,9.56,-1.28,0.07,2.4,1.04,0,">1 nonsynonymous","D98L G152V T201R",3
"lib2","SARS-CoV-2","AACATAATAGCGGCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W A67S V103F",3
"lib2","SARS-CoV-2","AACATAATCACTAACA",6,32.95,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K56S Y91W A105V Q144R",4
"lib2","SARS-CoV-2","AACATAATCCGTCCTA",4,55.45,9.44,-1.39,0.09,1.73,1.19,0,">1 nonsynonymous","P82S Y123F",2
"lib2","SARS-CoV-2","AACATAATCGATCTAT",1,16.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20M D90L",2
"lib2","SARS-CoV-2","AACATAATGCAATATG",8,40.26,10.6,-0.24,0.09,2.81,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACATAATGTATACGC",5,22.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2P Y21H V37L V103Y N118Q",5
"lib2","SARS-CoV-2","AACATAATTTCTGACT",5,107.18,10.12,-0.71,0.06,2.48,1.04,0,">1 nonsynonymous","A81N K198P",2
"lib2","SARS-CoV-2","AACATAATTTTTGGCG",29,161.95,6,-4.84,1.12,1.5,1.22,0.02,">1 nonsynonymous","S43E I104N G117T",3
"lib2","SARS-CoV-2","AACATACAAAGTGAAC",7,0.66,NA,NA,NA,NA,NA,NA,"stop","I2* C49G K87W E154W",4
"lib2","SARS-CoV-2","AACATACAATATGTAA",2,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S T170Y",2
"lib2","SARS-CoV-2","AACATACACATAATGC",4,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17C N107A",2
"lib2","SARS-CoV-2","AACATACACTCTCCGG",4,109.32,10.65,-0.18,0.06,2.84,1.09,0,">1 nonsynonymous","L60H K114Q",2
"lib2","SARS-CoV-2","AACATACACTGAAGGA",1,6.22,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S19F G116V",2
"lib2","SARS-CoV-2","AACATACAGATAAATC",3,37.9,7.99,-2.85,0.14,1.64,1.03,0.01,">1 nonsynonymous","Q144S Y165N",2
"lib2","SARS-CoV-2","AACATACAGGAATACG",1,15.48,9.39,-1.45,0.09,2.84,1.12,0,">1 nonsynonymous","Y35L N118L",2
"lib2","SARS-CoV-2","AACATACAGTGTCCCA",5,56.5,11.03,0.2,0.07,2.91,1.1,0,"1 nonsynonymous","S164H",1
"lib2","SARS-CoV-2","AACATACATCGAAAAT",7,154.43,10.71,-0.12,0.05,2.95,1.07,0,">1 nonsynonymous","G9A V65L",2
"lib2","SARS-CoV-2","AACATACATGTCACTA",7,21.9,7.25,-3.58,0.35,1.5,1.11,0.03,">1 nonsynonymous","D68E K87C S200L",3
"lib2","SARS-CoV-2","AACATACCCTATTTAA",8,68.38,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43P G51V R73W K87C Q144N",5
"lib2","SARS-CoV-2","AACATACCGTACGCCC",3,30.58,6,-4.84,2,1.5,1.21,0.04,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","AACATACCTAACGATT",5,10.04,NA,NA,NA,NA,NA,NA,"stop","Y35S L122*",2
"lib2","SARS-CoV-2","AACATACCTATAAGCG",5,80.47,10.66,-0.17,0.04,2.89,1.12,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","AACATACGAGATTAAC",1,5.88,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T55G Y66H L95A",3
"lib2","SARS-CoV-2","AACATACGATTCCAGC",1,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","AACATACGCATATAAA",5,33.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8S A105G G152F P161Q L183Y",5
"lib2","SARS-CoV-2","AACATACGCTCTATCC",2,129.57,10.37,-0.47,0.04,2.82,1.04,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","AACATACGGACATCTG",5,25.52,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","C6E K56M R127M A145V N151H G166V G196N",7
"lib2","SARS-CoV-2","AACATACGGAGAGTGC",3,38.15,10.48,-0.35,0.09,2.84,1.07,0,">1 nonsynonymous","V37A Q79T",2
"lib2","SARS-CoV-2","AACATACTAGCGTGCA",4,23.36,9.52,-1.32,0.13,1.85,1.06,0.01,"1 nonsynonymous","Y50N",1
"lib2","SARS-CoV-2","AACATACTATATCGCA",3,23.52,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","A22S Y35N A81C N171K",4
"lib2","SARS-CoV-2","AACATACTATCCAAAA",14,169.31,9.75,-1.09,0.08,1.75,1.11,0,">1 nonsynonymous","N4Q S29H D68M Y123F K199G",5
"lib2","SARS-CoV-2","AACATACTCTTATTCG",1,8.66,7.58,-3.26,0.41,1.5,1.08,0.07,">1 nonsynonymous","G9R D59L W106N",3
"lib2","SARS-CoV-2","AACATACTGAATATGA",4,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S R124S",2
"lib2","SARS-CoV-2","AACATACTGATGACAC",7,33.98,6,-4.84,2,1.5,1.38,0.06,">1 nonsynonymous","V11C P82G N107A",3
"lib2","SARS-CoV-2","AACATACTGCTTAATT",15,98.04,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N4H K26Q G101I I104D",4
"lib2","SARS-CoV-2","AACATACTTAGCAACC",5,35.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D98S A105D Y143S G155T L188Y",5
"lib2","SARS-CoV-2","AACATACTTATCTACC",1,15.2,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y35P N92E G152N",3
"lib2","SARS-CoV-2","AACATACTTTTACACC",26,5.03,NA,NA,NA,NA,NA,NA,"stop","N1K A22G K132* G155A L162S",5
"lib2","SARS-CoV-2","AACATAGAAATGAGAA",5,107.85,10.61,-0.22,0.04,2.92,1.05,0,"1 nonsynonymous","S164W",1
"lib2","SARS-CoV-2","AACATAGAATATTTTG",10,141.93,8.99,-1.85,0.05,2.91,1.07,0,">1 nonsynonymous","E10D K48E F62L S147V Q168V",5
"lib2","SARS-CoV-2","AACATAGACGTCAGTT",21,95.58,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S41V K48F L60T K114M Y123G",5
"lib2","SARS-CoV-2","AACATAGAGAATATTA",10,116.61,10.36,-0.48,0.03,2.85,1.06,0,">1 nonsynonymous","V115K E186F",2
"lib2","SARS-CoV-2","AACATAGAGCTATACT",8,111.2,9.65,-1.19,0.09,1.97,1.07,0,">1 nonsynonymous","N4T R27H N58S N120M R136M",5
"lib2","SARS-CoV-2","AACATAGCAACCGAAT",7,101.76,10.36,-0.48,0.05,2.9,1.11,0,">1 nonsynonymous","P7H T148C",2
"lib2","SARS-CoV-2","AACATAGCAGTCTGTA",3,56.96,10.63,-0.2,0.07,2.89,1.1,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","AACATAGCAGTGCGAT",9,125.22,9.42,-1.41,0.06,2.49,1.05,0,">1 nonsynonymous","T3S Y121R",2
"lib2","SARS-CoV-2","AACATAGCCAAATGTC",4,62.5,10.61,-0.23,0.06,2.9,1.12,0,">1 nonsynonymous","L5T K56R H189L",3
"lib2","SARS-CoV-2","AACATAGCCTTCAACT",2,6.73,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","R27M C49D G83I S139G G196L",5
"lib2","SARS-CoV-2","AACATAGCGAGAATGT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","D34S D68* K94M F99H T148S",5
"lib2","SARS-CoV-2","AACATAGCGCAACCCT",4,60.06,10.5,-0.33,0.06,2.94,1,0,">1 nonsynonymous","L60Q T100L I142F",3
"lib2","SARS-CoV-2","AACATAGGCGATACAA",2,18.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9L S19M T100S A105N Y143P C150A",6
"lib2","SARS-CoV-2","AACATAGTAATACCCC",9,2.04,NA,NA,NA,NA,NA,NA,"stop","F8T K56S D90G D98* I104V A190H",6
"lib2","SARS-CoV-2","AACATAGTACGTTTTT",11,173.43,6.47,-4.37,0.21,1.5,1.12,0,">1 nonsynonymous","W23K Y178T",2
"lib2","SARS-CoV-2","AACATAGTAGGCGTTT",8,128.53,10.82,-0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATAGTATCGACAC",7,130.77,8.49,-2.35,0.08,2.49,1.09,0,">1 nonsynonymous","N1S S113R",2
"lib2","SARS-CoV-2","AACATAGTCAAGTCTA",1,6.76,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103A G155V",2
"lib2","SARS-CoV-2","AACATAGTCATCTTAA",13,85.7,9.68,-1.16,0.02,2.96,1.02,0,">1 nonsynonymous","N64Q N118R",2
"lib2","SARS-CoV-2","AACATAGTCTACGAAC",14,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100H C195Y",2
"lib2","SARS-CoV-2","AACATAGTGATGCCTT",6,140.35,10.56,-0.27,0.06,2.79,1.07,0,">1 nonsynonymous","T63S Q144T",2
"lib2","SARS-CoV-2","AACATAGTGCCTACAC",3,47.3,10.76,-0.08,0.05,2.98,1.04,0,"1 nonsynonymous","A67C",1
"lib2","SARS-CoV-2","AACATATAAACGATAT",13,103.17,9.8,-1.04,0.03,2.96,1.04,0,">1 nonsynonymous","N58V P149R F156L",3
"lib2","SARS-CoV-2","AACATATAAACTCGAA",6,34.16,9.84,-0.99,0.08,2.81,1.13,0,">1 nonsynonymous","V37T D97F I142P",3
"lib2","SARS-CoV-2","AACATATAAATACAAA",8,105.62,8.76,-2.08,0.11,1.85,1.06,0.01,">1 nonsynonymous","S41G S108M K128I",3
"lib2","SARS-CoV-2","AACATATAACAAGCAT",16,102.44,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N1P A33Q S41I V181D",4
"lib2","SARS-CoV-2","AACATATAATCCGATG",2,0,NA,NA,NA,NA,NA,NA,"stop","I2L A14N S19* G86A Y91I F156R",6
"lib2","SARS-CoV-2","AACATATAATTAAGAG",6,63.17,8.29,-2.55,0.14,1.99,1.06,0.01,">1 nonsynonymous","D90A Y119V F134L T201H",4
"lib2","SARS-CoV-2","AACATATATACTGTCG",4,50.71,10.89,0.05,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","AACATATCAACGGGCG",6,83.33,9.41,-1.43,0.07,2.9,1.06,0,">1 nonsynonymous","D98T F156W Q168M",3
"lib2","SARS-CoV-2","AACATATCAATTCCTG",15,101.18,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I72Y P149H L183V",3
"lib2","SARS-CoV-2","AACATATCATCAACTG",4,48.19,10.5,-0.33,0.05,2.94,1.05,0,"1 nonsynonymous","F156Y",1
"lib2","SARS-CoV-2","AACATATCTCTAATTT",8,0.61,NA,NA,NA,NA,NA,NA,"stop","P54T L60* K94M N107L",4
"lib2","SARS-CoV-2","AACATATGAGCCACCA",4,45.73,10.38,-0.46,0.04,2.91,1.07,0,">1 nonsynonymous","E10S L60S",2
"lib2","SARS-CoV-2","AACATATGCATTATAT",1,41.95,8.47,-2.37,0.06,2.57,1.11,0,">1 nonsynonymous","N4S E10T L60G G166V P197S",5
"lib2","SARS-CoV-2","AACATATGCTTACAAA",11,160,10.7,-0.14,0.04,2.87,1.12,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","AACATATGTTCAAATT",5,0.71,NA,NA,NA,NA,NA,NA,"stop","C6S S36E N151Q K199*",4
"lib2","SARS-CoV-2","AACATATTAAAGCCCT",5,3.45,NA,NA,NA,NA,NA,NA,"stop","V153* P197G",2
"lib2","SARS-CoV-2","AACATATTAAGGAGGT",12,61.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y93L N118R S139F C158L S200L",5
"lib2","SARS-CoV-2","AACATATTACATTAAT",1,81.24,10.89,0.06,0.06,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATATTCGTAGGGC",8,165.37,9.92,-0.92,0.07,2.14,1.07,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","AACATATTGTTATCGG",1,73.98,6,-4.84,0.57,1.5,1.1,0,">1 nonsynonymous","L60S Y91E G116R Q176V",4
"lib2","SARS-CoV-2","AACATCAAACAAAAGA",5,0,NA,NA,NA,NA,NA,NA,"stop","T15R R27P L60* T85Y E141A F156T",6
"lib2","SARS-CoV-2","AACATCAATGGTTTGA",1,5.39,6,-4.84,2,3,1,0,">1 nonsynonymous","N40M S69K N107G E141N E186R L188M",6
"lib2","SARS-CoV-2","AACATCAATTCTTTTA",3,34.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6Y V52S R136A G146K G166V",5
"lib2","SARS-CoV-2","AACATCACAACCTATA",1,8.6,9.07,-1.76,0.25,2.28,1.04,0.02,">1 nonsynonymous","G9T K56S Y121L N151R",4
"lib2","SARS-CoV-2","AACATCACACGATCCT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","K94* V103P",2
"lib2","SARS-CoV-2","AACATCACACTATTGA",10,0.75,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib2","SARS-CoV-2","AACATCACTTATTCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","R16E N30* Y91W E154F",4
"lib2","SARS-CoV-2","AACATCACTTGTTCCG",1,37.33,8.78,-2.06,0.07,3,1.08,0,"1 nonsynonymous","Y159M",1
"lib2","SARS-CoV-2","AACATCAGGTCAACCG",5,32.33,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41P A105G S129Y N171D",4
"lib2","SARS-CoV-2","AACATCAGTGGAATAA",4,46.07,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","S36R G74D N107L S129F",4
"lib2","SARS-CoV-2","AACATCATAAAAAATC",2,35.95,7.85,-2.98,0.18,1.5,1.16,0.01,">1 nonsynonymous","K56L G86A K114N",3
"lib2","SARS-CoV-2","AACATCATACTGTAGG",5,29.93,10.62,-0.21,0.04,2.94,1.05,0,">1 nonsynonymous","V32I C61T P149F",3
"lib2","SARS-CoV-2","AACATCATGGTTGGAA",4,29.04,10.64,-0.2,0.06,2.83,1.16,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","AACATCATTGGTTAAA",2,19.6,10.57,-0.27,0.08,3,1,0,">1 nonsynonymous","N64I N120E S147F",3
"lib2","SARS-CoV-2","AACATCCAAGAAAAAT",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R N92I",2
"lib2","SARS-CoV-2","AACATCCAGATACTGC",1,28.23,10.12,-0.71,0.13,2.39,1.04,0.01,">1 nonsynonymous","F99P G101C",2
"lib2","SARS-CoV-2","AACATCCAGGCTGTAC",1,25.12,10.54,-0.3,0.07,2.86,1.03,0,">1 nonsynonymous","Y123L N171S",2
"lib2","SARS-CoV-2","AACATCCCATTATTTT",2,38.24,10.19,-0.64,0.04,2.95,1.06,0,">1 nonsynonymous","K87W D97M V115D",3
"lib2","SARS-CoV-2","AACATCCCCTTAGATA",4,45.66,10.67,-0.16,0.06,2.74,1.24,0,">1 nonsynonymous","R27K D98T",2
"lib2","SARS-CoV-2","AACATCCTAATTCTCA",11,147.99,6.31,-4.52,0.55,1.5,1.18,0.02,">1 nonsynonymous","C61M L95I N107L P149D",4
"lib2","SARS-CoV-2","AACATCCTACAATCAG",12,92.91,6,-4.84,2,1.5,1.23,0,">1 nonsynonymous","E10A N58I D112R N151K",4
"lib2","SARS-CoV-2","AACATCCTATCCGTAT",5,53.55,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Y50L T140P S147Y",3
"lib2","SARS-CoV-2","AACATCCTGTTCAACC",10,53.87,9.36,-1.48,0.13,2.44,1.1,0.01,">1 nonsynonymous","S43K N64Y K87S V182A",4
"lib2","SARS-CoV-2","AACATCCTTAAACTGT",3,8.98,7.49,-3.35,0.38,1.62,1.13,0.03,">1 nonsynonymous","F8V K87Q W106R",3
"lib2","SARS-CoV-2","AACATCCTTTAAATCA",5,84.5,10.86,0.03,0.06,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATCGACAACTACG",1,6.2,6.73,-4.1,0.73,1.5,1.15,0.06,">1 nonsynonymous","L57H K128E G146M",3
"lib2","SARS-CoV-2","AACATCGAGTTCTTCG",8,49.27,7.55,-3.29,0.23,1.6,1.16,0.01,">1 nonsynonymous","F44L Y119P R136T T201C",4
"lib2","SARS-CoV-2","AACATCGGCACGCAAA",1,9.57,10.79,-0.04,0.09,2.79,1.23,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","AACATCGGGACTAGGT",12,120.24,9.54,-1.29,0.07,2.04,1.05,0,">1 nonsynonymous","N64Q I80L D90L",3
"lib2","SARS-CoV-2","AACATCGTCAAAGAGT",6,34.8,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","F17R F47G Y143G T170R",4
"lib2","SARS-CoV-2","AACATCTAAAAATCGG",4,14.88,9.36,-1.48,0.32,1.5,1,0.08,">1 nonsynonymous","T3H V181F",2
"lib2","SARS-CoV-2","AACATCTAATTACAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R I80T V103R F134V G174K",5
"lib2","SARS-CoV-2","AACATCTATCAAAAAC",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T D90F L95R G101L",4
"lib2","SARS-CoV-2","AACATCTCAATTGAAC",7,85.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23L D90S F99L Q176D T201R",5
"lib2","SARS-CoV-2","AACATCTCCTTTGATA",3,1.01,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","AACATCTCTGATCTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N4P G152* Q168A",3
"lib2","SARS-CoV-2","AACATCTGACAGTACA",13,346.55,10.77,-0.07,0.03,2.94,1.08,0,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","AACATCTTAATACCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R Y119M S129T F134S F167N",5
"lib2","SARS-CoV-2","AACATGAAACGAATCT",6,171.27,9.19,-1.65,0.08,2.59,1.11,0,">1 nonsynonymous","N4S W106F Y119R",3
"lib2","SARS-CoV-2","AACATGAAATGATGTT",8,43.9,10.34,-0.5,0.04,2.96,1.03,0,">1 nonsynonymous","I2Q A33E",2
"lib2","SARS-CoV-2","AACATGAAATGTTTCC",9,165.83,10.7,-0.14,0.04,2.89,1.09,0,"1 nonsynonymous","P191C",1
"lib2","SARS-CoV-2","AACATGAAGCTCGTAG",5,81.06,8.43,-2.41,0.04,1.88,1.07,0,">1 nonsynonymous","W106S N120P S147P",3
"lib2","SARS-CoV-2","AACATGAAGTTGATTG",7,2.06,NA,NA,NA,NA,NA,NA,"stop","F44R D90S G116* V182K",4
"lib2","SARS-CoV-2","AACATGAATGAAAGAC",13,146.09,10.71,-0.13,0.05,2.87,1.1,0,">1 nonsynonymous","K48I K128S",2
"lib2","SARS-CoV-2","AACATGACACATCTTA",10,149.18,9.81,-1.03,0.08,2.13,1.03,0,"1 nonsynonymous","L38P",1
"lib2","SARS-CoV-2","AACATGACCAGCATAG",13,69.3,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N64V D90V I142S",3
"lib2","SARS-CoV-2","AACATGACCAGTTTCC",6,73.09,8.37,-2.47,0.09,2.36,1.07,0,">1 nonsynonymous","L5W A33T S113N",3
"lib2","SARS-CoV-2","AACATGACCATACTAA",2,18.19,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V37S V103A R179L",3
"lib2","SARS-CoV-2","AACATGACTCAAAACA",16,108.63,6,-4.84,1.37,1.5,1.27,0.02,"1 nonsynonymous","L95N",1
"lib2","SARS-CoV-2","AACATGAGACATATTC",15,229.24,10.83,0,0.04,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACATGAGACGTGCCC",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L R73N A81S N107T",4
"lib2","SARS-CoV-2","AACATGAGCACCGCTT",3,20.33,10.87,0.03,0.11,2.9,1.1,0.01,">1 nonsynonymous","V37S T201A",2
"lib2","SARS-CoV-2","AACATGAGTAACTACA",4,43.06,10.75,-0.08,0.06,3,1.04,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","AACATGATATGTCGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","W106L E141* K199S",3
"lib2","SARS-CoV-2","AACATGATCCCTACAC",12,160.65,10.04,-0.79,0.05,2.53,1.04,0,">1 nonsynonymous","S69T Y165F",2
"lib2","SARS-CoV-2","AACATGATTAGAAAAA",6,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K V32L G152L T201L",4
"lib2","SARS-CoV-2","AACATGATTATATTAC",2,10.04,10.96,0.12,0.11,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATGATTCATCTAA",8,62.48,9.35,-1.49,0.04,2.9,1.06,0,">1 nonsynonymous","E10M N118S",2
"lib2","SARS-CoV-2","AACATGCAAAAGCACC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","AACATGCAAACCCTAT",16,225.12,6,-4.84,0.95,1.5,1.19,0.01,">1 nonsynonymous","I28K S69L",2
"lib2","SARS-CoV-2","AACATGCACTACTAAT",1,13.51,9.45,-1.38,0.1,2.25,1.07,0.01,">1 nonsynonymous","L5V P96R F156R",3
"lib2","SARS-CoV-2","AACATGCAGGAAAAAA",3,10.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14G D59S D90N Y159V V180K",5
"lib2","SARS-CoV-2","AACATGCATAAAAAAA",2,8.37,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","D68R W106S",2
"lib2","SARS-CoV-2","AACATGCATACTTCGG",14,176.17,6,-4.84,1.52,1.5,1.18,0.01,">1 nonsynonymous","V37L T55N F99I N157A S184I",5
"lib2","SARS-CoV-2","AACATGCCAGTCATCT",10,55.41,9.54,-1.29,0.14,1.79,1.1,0.01,">1 nonsynonymous","N1T A14V L57T",3
"lib2","SARS-CoV-2","AACATGCCGACGCATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66W A81H D97K C158S",4
"lib2","SARS-CoV-2","AACATGCCTCAGGCAA",11,335.63,10.78,-0.05,0.04,2.93,1.09,0,">1 nonsynonymous","F44I T148S P197L",3
"lib2","SARS-CoV-2","AACATGCGAATACAAA",2,20.3,10.93,0.09,0.07,3,1.02,0,"1 nonsynonymous","T148M",1
"lib2","SARS-CoV-2","AACATGCGTAGACTAG",1,21.09,8.36,-2.47,0.16,2.39,1.04,0.01,">1 nonsynonymous","A18F G117R I138L",3
"lib2","SARS-CoV-2","AACATGCGTCAACCAT",1,8.15,8.91,-1.93,0.11,2.05,1.03,0.01,">1 nonsynonymous","T3S L60P G152I",3
"lib2","SARS-CoV-2","AACATGCTACCCCCCT",6,79.5,9.26,-1.58,0.05,2.8,1.05,0,">1 nonsynonymous","T100Q N110Y G146N",3
"lib2","SARS-CoV-2","AACATGCTATACTAGA",9,243.83,10.26,-0.57,0.03,2.92,1.08,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AACATGCTCGAGATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S A105K",2
"lib2","SARS-CoV-2","AACATGCTTAAAATCC",2,53.03,9.85,-0.99,0.09,2.12,1.04,0,">1 nonsynonymous","T55I W106K T201H",3
"lib2","SARS-CoV-2","AACATGCTTAGATTCA",6,37.15,10.85,0.01,0.08,2.91,1.09,0,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","AACATGGAAATCTTTT",2,47.16,10.41,-0.43,0.08,2.84,1.11,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","AACATGGAATTGGAGT",2,11.67,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","Y39L T55N Y91H K128F F167A",5
"lib2","SARS-CoV-2","AACATGGATATATATC",2,14.88,10.96,0.12,0.09,2.96,1.06,0,"1 nonsynonymous","A190Y",1
"lib2","SARS-CoV-2","AACATGGCAAATGGTA",1,35.77,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T3I S19P K87G N92Y S113T",5
"lib2","SARS-CoV-2","AACATGGCATAACCAT",4,65.29,9.03,-1.81,0.04,2.97,1.04,0,">1 nonsynonymous","S129G P149Y Q168L",3
"lib2","SARS-CoV-2","AACATGGCCATGTTAT",3,41.34,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","V77S N110V R124N T140P G155S",5
"lib2","SARS-CoV-2","AACATGGCCGTTGACT",2,33.87,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","A22L I104G L131V D137Y S164R",5
"lib2","SARS-CoV-2","AACATGGCTATAGACA",4,41.47,10.26,-0.57,0.07,2.98,1.01,0,">1 nonsynonymous","Y35F S41G K114T N120W",4
"lib2","SARS-CoV-2","AACATGGTCGCCCTCT",5,58.14,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S45V V52N A105V T148A N157V",5
"lib2","SARS-CoV-2","AACATGGTTATCTGAA",1,9.56,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F70K Q84F K94Y L111Y I142F",5
"lib2","SARS-CoV-2","AACATGTAACATACGG",3,16.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56Q K87M D90V D137I",4
"lib2","SARS-CoV-2","AACATGTACACCAATA",7,49.01,10.37,-0.47,0.05,3,1.02,0,">1 nonsynonymous","D59V R78Q",2
"lib2","SARS-CoV-2","AACATGTATAAAACCT",4,110.09,10.25,-0.59,0.07,2.76,1.02,0,">1 nonsynonymous","L5V Y50H",2
"lib2","SARS-CoV-2","AACATGTATTGACACC",8,114.35,8.32,-2.51,0.13,2.19,1.04,0.01,">1 nonsynonymous","S36L F126Y S139I",3
"lib2","SARS-CoV-2","AACATGTCGCACTTAC",5,9.57,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5R D68R D98L",3
"lib2","SARS-CoV-2","AACATGTGAGGCATAC",5,66.42,10.57,-0.27,0.04,2.88,1.1,0,">1 nonsynonymous","N13Y S41F",2
"lib2","SARS-CoV-2","AACATGTGTCCAAGAC",1,7.37,9.48,-1.35,0.2,2.44,1,0.01,">1 nonsynonymous","L57T G116Y",2
"lib2","SARS-CoV-2","AACATTAAAGGAAATA",4,47.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88Y D98R S113Q S129F",4
"lib2","SARS-CoV-2","AACATTAAATGAGCTT",7,35.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51S P96S W106R",3
"lib2","SARS-CoV-2","AACATTAACACGTATG",1,91.31,10.77,-0.07,0.02,2.99,1.01,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","AACATTAACGAAAGTT",3,24.65,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12D L125V N157S S200R",4
"lib2","SARS-CoV-2","AACATTAAGAGACCTA",1,21.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S108Y K128C P149N",3
"lib2","SARS-CoV-2","AACATTAATATATATA",9,2.87,NA,NA,NA,NA,NA,NA,"stop","R27E D59R P82* W106E Y121H",5
"lib2","SARS-CoV-2","AACATTAATCGCCCAG",16,137.36,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86E V103W L131N",3
"lib2","SARS-CoV-2","AACATTAATTTAGGTG",8,58.43,10.45,-0.39,0.06,2.86,1.08,0,">1 nonsynonymous","L60M D97G S129V F160G",4
"lib2","SARS-CoV-2","AACATTACAGCATTCA",4,2.12,NA,NA,NA,NA,NA,NA,"stop","C6* S45H T55L P82D",4
"lib2","SARS-CoV-2","AACATTACCAAAGTGA",4,37.11,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y93R F160G",2
"lib2","SARS-CoV-2","AACATTACGAGTCCCT",6,28.08,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N4Y D59S W106L N118Y T170A",5
"lib2","SARS-CoV-2","AACATTACTAACGGTT",1,33.18,8.53,-2.31,0.22,1.72,1.1,0.02,">1 nonsynonymous","D112N V173K",2
"lib2","SARS-CoV-2","AACATTAGAGCACTGC",9,157.11,10.63,-0.2,0.05,2.93,1.04,0,">1 nonsynonymous","N64L Q168R",2
"lib2","SARS-CoV-2","AACATTAGGAGACATG",11,23.71,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41L F99L C158S",3
"lib2","SARS-CoV-2","AACATTATAAACTGCG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4L D34I F44* C61E Q84C",5
"lib2","SARS-CoV-2","AACATTATACACAATA",14,86.4,8.59,-2.25,0.22,1.5,1,0.02,">1 nonsynonymous","V65N T100N",2
"lib2","SARS-CoV-2","AACATTATACCCTAGC",3,44.65,10.03,-0.81,0.08,2.87,1.02,0.01,">1 nonsynonymous","N13D F156L",2
"lib2","SARS-CoV-2","AACATTATATATTCAT",3,73.07,10.98,0.15,0.05,2.98,1.03,0,"1 nonsynonymous","N24R",1
"lib2","SARS-CoV-2","AACATTATCTTGACTT",2,0,NA,NA,NA,NA,NA,NA,"stop","D97Y Q168*",2
"lib2","SARS-CoV-2","AACATTATGCCAAACA",4,37.16,9.01,-1.83,0.12,1.98,1.18,0.01,">1 nonsynonymous","D97F N107R V115L",3
"lib2","SARS-CoV-2","AACATTATTACACGAC",4,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29W D98Q",2
"lib2","SARS-CoV-2","AACATTATTTAAAGTA",1,23.67,10.85,0.02,0.05,2.96,1.05,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","AACATTCAAAACCAAT",2,82.1,10.88,0.04,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATTCAACCACCGG",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I I80Q N107F",3
"lib2","SARS-CoV-2","AACATTCACACAAGCT",2,31.68,7.56,-3.28,0.28,1.5,1.23,0.02,">1 nonsynonymous","F12H V37Y A81Q S129H",4
"lib2","SARS-CoV-2","AACATTCACTTGTTGC",5,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y G83I K94D V173F",4
"lib2","SARS-CoV-2","AACATTCATAGTTCCT",7,80.87,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","P82Q S108F V153E",3
"lib2","SARS-CoV-2","AACATTCATCCATCAT",1,2.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACATTCATGCGGCTG",5,101.67,9.8,-1.04,0.08,2.17,1.07,0,"1 nonsynonymous","L38N",1
"lib2","SARS-CoV-2","AACATTCATGTTCCCT",11,71.23,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V11C K48N C49K S113V F160D",5
"lib2","SARS-CoV-2","AACATTCCAATAAACA",11,1.32,NA,NA,NA,NA,NA,NA,"stop","Y91N Y119* N157S",3
"lib2","SARS-CoV-2","AACATTCCCATTAATC",2,68.8,10.46,-0.38,0.05,2.86,1.06,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","AACATTCGATACTTCC",8,88.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N171F",1
"lib2","SARS-CoV-2","AACATTCGGATTCAAA",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21G S113E N120S",3
"lib2","SARS-CoV-2","AACATTCGTAATTATG",6,28.06,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R78D D98W I104N E135F",4
"lib2","SARS-CoV-2","AACATTCTACAAGAAC",2,27.24,10.27,-0.56,0.07,2.71,1.14,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","AACATTCTACGTCCAG",1,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L G83V D97T P177G",4
"lib2","SARS-CoV-2","AACATTCTAGTGTCCA",3,70.6,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","P54R C61N Y119F Q168P",4
"lib2","SARS-CoV-2","AACATTCTTGTTTAGC",7,9.67,NA,NA,NA,NA,NA,NA,"stop","Y93* K199L",2
"lib2","SARS-CoV-2","AACATTGAAATAATTT",1,20.9,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19E R25P",2
"lib2","SARS-CoV-2","AACATTGACATATCTT",2,20.69,6.2,-4.63,1.17,1.5,1.17,0.07,">1 nonsynonymous","A14T A81T V103Y",3
"lib2","SARS-CoV-2","AACATTGACGAAATAA",13,60.42,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","F12L N64I I88R",3
"lib2","SARS-CoV-2","AACATTGCATATAAAT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","AACATTGCCTCACCGG",3,56.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36L P96L R179L",3
"lib2","SARS-CoV-2","AACATTGCGATTAAAG",10,117.87,9.82,-1.01,0.05,2.73,1.04,0,">1 nonsynonymous","T55R S113A Y121N",3
"lib2","SARS-CoV-2","AACATTGGGGTTTACA",1,27.15,9.74,-1.1,0.11,2.13,1.05,0,">1 nonsynonymous","N13V N120H",2
"lib2","SARS-CoV-2","AACATTGGTCACAGAA",3,97.05,10.78,-0.05,0.05,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACATTGGTGGACACA",5,93.98,8.36,-2.48,0.1,2.79,1.13,0,">1 nonsynonymous","L125D K198V",2
"lib2","SARS-CoV-2","AACATTGTCAGGTACC",6,119.08,10.89,0.05,0.1,2.82,1.02,0,"1 nonsynonymous","P7N",1
"lib2","SARS-CoV-2","AACATTGTTGACTCGA",4,19.48,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","F17M D90Y P96G",3
"lib2","SARS-CoV-2","AACATTTAAACCAAAT",5,43.79,10.65,-0.19,0.04,2.87,1.14,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","AACATTTAACTCCCTC",4,39.8,8.54,-2.3,0.09,2.54,1.06,0,">1 nonsynonymous","F99M L122S N157S",3
"lib2","SARS-CoV-2","AACATTTAGTGCAGGG",2,57.16,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A42T G51S N58A G86H G155W Q163M",6
"lib2","SARS-CoV-2","AACATTTCACGCGAAA",11,240.15,10.81,-0.03,0.03,2.9,1.1,0,"1 nonsynonymous","S43D",1
"lib2","SARS-CoV-2","AACATTTCCAGATATC",1,11.15,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T15I K56L V103Y L122T",4
"lib2","SARS-CoV-2","AACATTTGTAAAGTTC",3,43.54,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A14F Y21R C61I Y175S",4
"lib2","SARS-CoV-2","AACATTTGTATAAATT",1,47.73,8.47,-2.37,0.17,2.76,1.05,0.01,">1 nonsynonymous","A42G Y175R",2
"lib2","SARS-CoV-2","AACATTTGTTGTTCCA",6,51.75,7.38,-3.45,0.31,1.5,1.24,0.03,">1 nonsynonymous","A89F I138G",2
"lib2","SARS-CoV-2","AACATTTTAATCAAAG",1,16.98,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V37S G86W A105L K114W Y121H V173R",6
"lib2","SARS-CoV-2","AACATTTTATAGTCGA",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63K Y123N",2
"lib2","SARS-CoV-2","AACATTTTATCCTAAA",9,120.76,10.46,-0.37,0.07,2.87,1.06,0,">1 nonsynonymous","N1I A42N L60S",3
"lib2","SARS-CoV-2","AACATTTTGCAGTTGG",9,3.33,NA,NA,NA,NA,NA,NA,"stop","T63W V103* P177C",3
"lib2","SARS-CoV-2","AACCAAAAAAATTTGT",9,135.37,10.86,0.03,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAAAAAATTATTA",3,37.53,9.96,-0.87,0.07,2.03,1.06,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","AACCAAAAAGCTCGTT",2,30.74,8.98,-1.85,0.11,2.49,1.01,0,">1 nonsynonymous","G83T E154F",2
"lib2","SARS-CoV-2","AACCAAAAATCTCACG",7,157.24,10.56,-0.27,0.04,2.9,1.11,0,">1 nonsynonymous","S43M G152T",2
"lib2","SARS-CoV-2","AACCAAAAATTTAAAC",1,24.18,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","L5D Q84L T100S W106V K128F",5
"lib2","SARS-CoV-2","AACCAAAACAACAGGG",4,55.74,10.16,-0.68,0.04,2.88,1.05,0,">1 nonsynonymous","K26A N40K L60S",3
"lib2","SARS-CoV-2","AACCAAAACACTAAAG",5,61.9,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A42H A81T Q176G",3
"lib2","SARS-CoV-2","AACCAAAACGCCTAAT",4,47.19,10.4,-0.43,0.05,2.9,1.09,0,">1 nonsynonymous","T63S T100L F156H",3
"lib2","SARS-CoV-2","AACCAAAACTTACTTC",7,116.46,10.25,-0.59,0.03,2.85,1.01,0,">1 nonsynonymous","K56S Y91K",2
"lib2","SARS-CoV-2","AACCAAAATAGGAACT",4,44.76,6,-4.84,2,1.5,1.21,0.04,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","AACCAAAATATTTAAA",10,171.12,10.47,-0.37,0.03,2.95,1.04,0,">1 nonsynonymous","D59A C61W",2
"lib2","SARS-CoV-2","AACCAAAATCAATTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","C49F G86* D112Q",3
"lib2","SARS-CoV-2","AACCAAAATGACCATC",19,354.79,8.62,-2.22,0.06,2.45,1.06,0,">1 nonsynonymous","G9Y P161N",2
"lib2","SARS-CoV-2","AACCAAACACAACCGG",2,12.64,7.09,-3.74,0.25,1.5,1.05,0.02,">1 nonsynonymous","Y35F Y50G N64K",3
"lib2","SARS-CoV-2","AACCAAACAGGGCCTA",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G R73A Q79M A192P T201I",5
"lib2","SARS-CoV-2","AACCAAACATGGCGCG",3,34.8,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","E10Y D59G D98F R136E",4
"lib2","SARS-CoV-2","AACCAAACGAATTGAA",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L A105C S113W Y119M S200V",5
"lib2","SARS-CoV-2","AACCAAACTCAACGCA",1,28.54,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","K128A C150I N157Y T170K",4
"lib2","SARS-CoV-2","AACCAAAGGGATCACT",1,8.03,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V11S D59K L95K E135W G174N",5
"lib2","SARS-CoV-2","AACCAAAGTACAGATT",2,26.93,10.88,0.04,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAAAGTGGCAGTT",3,76.47,10.14,-0.7,0.04,2.94,1,0,">1 nonsynonymous","C6S V115T",2
"lib2","SARS-CoV-2","AACCAAATAAGAATCA",5,41.95,8.83,-2,0.17,1.5,1,0.02,">1 nonsynonymous","F44Y K87L Y91S Y123M",4
"lib2","SARS-CoV-2","AACCAAATCTAACTAA",10,66.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39L Y50S V103R",3
"lib2","SARS-CoV-2","AACCAAATTCTAAGTC",7,27.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V52C N64R G86Q P169T",4
"lib2","SARS-CoV-2","AACCAAATTGTAGCGG",6,0.75,NA,NA,NA,NA,NA,NA,"stop","G9* K56Y",2
"lib2","SARS-CoV-2","AACCAACAAATATAAA",4,6.78,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K48I Y121H E141P V173S",4
"lib2","SARS-CoV-2","AACCAACAATTAGTGG",8,216.95,9.58,-1.25,0.03,2.89,1.07,0,">1 nonsynonymous","R73S P82V Q168A P197I",4
"lib2","SARS-CoV-2","AACCAACACCTATATG",5,100.48,10.25,-0.58,0.04,2.99,1.04,0,">1 nonsynonymous","Y39V K114R P149Q G174R",4
"lib2","SARS-CoV-2","AACCAACACTGGCTAT",5,35.29,10.83,-0.01,0.11,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAACAGCGGCATA",12,101.22,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D97H S113L I142S P197Q",4
"lib2","SARS-CoV-2","AACCAACAGTGAAAGG",7,86.23,10.6,-0.23,0.08,2.73,1.05,0,">1 nonsynonymous","N151I T201Q",2
"lib2","SARS-CoV-2","AACCAACATCCATTAA",1,7.2,8.11,-2.72,0.25,2.23,1,0.02,">1 nonsynonymous","Y91V Y119C",2
"lib2","SARS-CoV-2","AACCAACATTGGCGAT",18,282.64,10.78,-0.05,0.03,2.92,1.09,0,">1 nonsynonymous","N4R T46L T55Y D90Q T100V",5
"lib2","SARS-CoV-2","AACCAACCATAGGCCA",7,108.73,10.13,-0.7,0.05,2.73,1.03,0,">1 nonsynonymous","S69M N151Y L187Q",3
"lib2","SARS-CoV-2","AACCAACCCGTATTAC",4,74.46,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","R27P Y35V V77E",3
"lib2","SARS-CoV-2","AACCAACCGTTTCGCG",2,27.69,10.59,-0.24,0.06,2.94,1.06,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AACCAACCTATTTCAG",4,24.72,6,-4.84,0.85,1.5,1.09,0.01,">1 nonsynonymous","F44N F62T D90I",3
"lib2","SARS-CoV-2","AACCAACGAAAATATG",14,118.43,9.41,-1.43,0.07,1.9,1.13,0,">1 nonsynonymous","E10T S36K N107R",3
"lib2","SARS-CoV-2","AACCAACGGAAAAAAA",7,213.61,10.85,0.01,0.04,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAACGGAATAACC",4,19.91,9.41,-1.42,0.05,2.83,1.19,0,"1 nonsynonymous","F126I",1
"lib2","SARS-CoV-2","AACCAACGGGTGAACT",5,78.37,10.22,-0.62,0.02,2.89,1.05,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","AACCAACGTCAAGTTC",1,83.75,10.04,-0.79,0.08,2.33,1.08,0,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","AACCAACTCACCAAAG",1,3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACCAACTCCATAAAA",5,63.01,8.12,-2.72,0.13,2.72,1.1,0.01,"1 nonsynonymous","Y175L",1
"lib2","SARS-CoV-2","AACCAAGAACCCAAAA",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D G86A",2
"lib2","SARS-CoV-2","AACCAAGAATATTAAT",5,0.91,NA,NA,NA,NA,NA,NA,"stop","F8W T55H Y143* V182Q S200L",5
"lib2","SARS-CoV-2","AACCAAGCACCAAGGG",2,49.83,10.11,-0.73,0.05,2.79,1.01,0,">1 nonsynonymous","F44H K56A N120W",3
"lib2","SARS-CoV-2","AACCAAGCCTTAACGT",2,36.26,9.25,-1.59,0.1,2.56,1.07,0,">1 nonsynonymous","N64K N107E",2
"lib2","SARS-CoV-2","AACCAAGGTCAACCAG",5,2.65,NA,NA,NA,NA,NA,NA,"stop","I2V L60* I142R H189I",4
"lib2","SARS-CoV-2","AACCAAGTCAAGTTAA",2,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G N64R V77S N171S",4
"lib2","SARS-CoV-2","AACCAATAAAAAAAGG",9,51.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8V T15N V37T S45T F99S",5
"lib2","SARS-CoV-2","AACCAATAAAAACTGT",5,36.8,9.86,-0.98,0.07,2.77,1.03,0,">1 nonsynonymous","A14M Y39G F160P",3
"lib2","SARS-CoV-2","AACCAATAAACTATAC",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N C49F S53D K87M",4
"lib2","SARS-CoV-2","AACCAATAAATCTATG",1,0.24,NA,NA,NA,NA,NA,NA,"stop","N110L N118* I138K E154I",4
"lib2","SARS-CoV-2","AACCAATACAATAAGG",5,17.81,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","C102R S139L P177Q S184L",4
"lib2","SARS-CoV-2","AACCAATACCAAGGCA",3,84.43,10.59,-0.24,0.03,2.96,1.03,0,">1 nonsynonymous","T3M C61Y",2
"lib2","SARS-CoV-2","AACCAATACTTTAAAA",6,89.46,10.65,-0.19,0.06,2.89,1.12,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","AACCAATAGACGAACA",6,94.78,10.43,-0.4,0.04,2.95,1.07,0,">1 nonsynonymous","L122K N151A F156K",3
"lib2","SARS-CoV-2","AACCAATATAAAGAAA",5,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25G T148L P169F",3
"lib2","SARS-CoV-2","AACCAATATGAGATTT",2,41.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y39V S113T F126M R179G",4
"lib2","SARS-CoV-2","AACCAATATTCAAAGC",14,234.49,10.51,-0.32,0.04,2.96,1.04,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","AACCAATCTTACATAC",5,73.15,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y93V D97P Y119I",3
"lib2","SARS-CoV-2","AACCAATGCAAACACA",9,28.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T N110L Y121H T148V K199Y",5
"lib2","SARS-CoV-2","AACCAATGCATACGAC",4,35.78,10.54,-0.29,0.08,2.99,1.02,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AACCAATGTAGACCGA",5,20.23,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38M T100D S129M V181S",4
"lib2","SARS-CoV-2","AACCAATGTTCAAATT",6,69.89,8.69,-2.14,0.19,1.5,1.14,0.01,"1 nonsynonymous","D137M",1
"lib2","SARS-CoV-2","AACCAATTAAAACGAT",3,52.91,6.42,-4.42,0.37,1.69,1.16,0.01,">1 nonsynonymous","Q84V E135S R179V",3
"lib2","SARS-CoV-2","AACCAATTACTAAATT",3,84.53,9.79,-1.04,0.1,2.3,1.05,0,">1 nonsynonymous","K48T A105F F160K",3
"lib2","SARS-CoV-2","AACCAATTCAATAGTT",11,219.54,9.61,-1.22,0.06,2.81,1.11,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","AACCAATTCGAATACG",8,13,6,-4.84,1.81,3,1.05,0.01,">1 nonsynonymous","F44Y P82Y N120I I142S",4
"lib2","SARS-CoV-2","AACCAATTCTAACACG",7,0.44,NA,NA,NA,NA,NA,NA,"stop","D34S C61F S108* K128T P149T V173S",6
"lib2","SARS-CoV-2","AACCAATTGTCATCAT",2,85.82,10.15,-0.69,0.03,2.96,1.02,0,">1 nonsynonymous","L57F L122M A145T",3
"lib2","SARS-CoV-2","AACCAATTTAAGCGAG",8,47.85,10.63,-0.21,0.03,2.93,1.05,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","AACCAATTTATACTAT",4,34.61,10.04,-0.8,0.08,2.85,1.06,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","AACCACAAAGTTTTAC",7,75.55,10.07,-0.77,0.06,2.72,1.11,0,">1 nonsynonymous","I138V A145T",2
"lib2","SARS-CoV-2","AACCACAACCACTCGA",7,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R S29T I88K",3
"lib2","SARS-CoV-2","AACCACAATCAAACGA",8,86.65,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","L38P G83Y C102L",3
"lib2","SARS-CoV-2","AACCACAATTCTGTAC",1,5.68,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5I K87Q E141T L162W",4
"lib2","SARS-CoV-2","AACCACACAATGTCGG",4,46.51,8.3,-2.54,0.18,1.5,1.13,0.02,"1 nonsynonymous","R127C",1
"lib2","SARS-CoV-2","AACCACACCACGAAGT",9,105.15,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","W23C C150E P177N",3
"lib2","SARS-CoV-2","AACCACACCCCACCGG",9,149.61,10.7,-0.13,0.03,2.97,1.04,0,"1 nonsynonymous","A81E",1
"lib2","SARS-CoV-2","AACCACAGACCTACCG",14,158.81,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","C49D G86W",2
"lib2","SARS-CoV-2","AACCACAGCAGTCACC",7,81.87,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N4I S36L D90H L122A S139L Y143L",6
"lib2","SARS-CoV-2","AACCACAGCTAGCGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","W106G F160*",2
"lib2","SARS-CoV-2","AACCACAGGCAAGGGG",1,6.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D112Q P149S",2
"lib2","SARS-CoV-2","AACCACAGGTCTACTA",13,35.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10S T15F V77M R136S",4
"lib2","SARS-CoV-2","AACCACAGTAAACCTC",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y C61F Q84P R124F N151L G196F",6
"lib2","SARS-CoV-2","AACCACAGTACAAGGC",16,102.11,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C31H D75G T100S A105S",4
"lib2","SARS-CoV-2","AACCACAGTCATGATC",21,326.27,9.71,-1.13,0.08,2.29,1.06,0,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","AACCACAGTTACCTTA",5,13.2,6.08,-4.75,0.53,3,1.05,0.01,">1 nonsynonymous","N64P V180N K198M",3
"lib2","SARS-CoV-2","AACCACATCAAGATCT",3,119.64,10.74,-0.09,0.03,2.92,1.07,0,">1 nonsynonymous","S41H T46V",2
"lib2","SARS-CoV-2","AACCACATGTCGAAAA",5,80.68,8.26,-2.58,0.08,2.31,1.05,0,">1 nonsynonymous","T46L A145Y P169L",3
"lib2","SARS-CoV-2","AACCACATTAAGCCTG",5,1.2,NA,NA,NA,NA,NA,NA,"stop","G9* S29N D98S R136F",4
"lib2","SARS-CoV-2","AACCACATTCAGAGAT",10,281.4,8.79,-2.05,0.06,2.9,1.06,0,">1 nonsynonymous","V37M S113V",2
"lib2","SARS-CoV-2","AACCACCAAACAGGTC",2,24.83,10.63,-0.2,0.06,3,1.02,0,">1 nonsynonymous","S41M K132T",2
"lib2","SARS-CoV-2","AACCACCAAGTATGAT",5,132.08,10.12,-0.71,0.06,2.6,1.09,0,">1 nonsynonymous","P161A V173F",2
"lib2","SARS-CoV-2","AACCACCAGTGTTCCA",1,6.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15K S41Q Q84P L95N K132R Y175A",6
"lib2","SARS-CoV-2","AACCACCATGAAATTG",1,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y35L G155C L187K",4
"lib2","SARS-CoV-2","AACCACCATTACCCGG",1,89.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y66F N110S Y119E P133T Q163K P177S",6
"lib2","SARS-CoV-2","AACCACCATTATTCGA",1,24.91,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","S41L K94N Y119I A145M",4
"lib2","SARS-CoV-2","AACCACCCAAGCCAAC",7,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95M F99W",2
"lib2","SARS-CoV-2","AACCACCCCGTCAAGT",8,45.17,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V11Y N107M L122C G174H S200V",5
"lib2","SARS-CoV-2","AACCACCGGATACTCA",4,8.54,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","S41P G51C N157Y",3
"lib2","SARS-CoV-2","AACCACCGGGGGTTGG",5,179.91,9.21,-1.63,0.08,2.49,1.1,0,">1 nonsynonymous","V37K N64S Q176K",3
"lib2","SARS-CoV-2","AACCACCTACTAGACT",5,52.37,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V37P G86I Y93F Q176T",4
"lib2","SARS-CoV-2","AACCACCTCCTGGCAA",6,98.58,10.47,-0.37,0.04,2.89,1.06,0,">1 nonsynonymous","G152V V173L",2
"lib2","SARS-CoV-2","AACCACCTGCCAAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* Y50S",2
"lib2","SARS-CoV-2","AACCACGAAGCCCGCA",2,25.25,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L38S G116S T170V",3
"lib2","SARS-CoV-2","AACCACGATAAACGTT",1,35.11,8.75,-2.09,0.08,3,1.04,0,">1 nonsynonymous","E154N G166M",2
"lib2","SARS-CoV-2","AACCACGATATGCCAC",5,75.22,6,-4.84,0.54,1.5,1.09,0,">1 nonsynonymous","C6K Y175S",2
"lib2","SARS-CoV-2","AACCACGATGAGGTAA",4,34.01,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","N1P D59P S69V N107S Y143L L188M H189Y",7
"lib2","SARS-CoV-2","AACCACGATGATACTG",1,1.27,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","AACCACGATTGACACA",1,37.02,6.34,-4.49,0.27,2.53,1.11,0,">1 nonsynonymous","S29F C158K",2
"lib2","SARS-CoV-2","AACCACGCTAGTACGT",8,114.78,10.02,-0.81,0.07,2.57,1.05,0,">1 nonsynonymous","T55P K128V Q144K",3
"lib2","SARS-CoV-2","AACCACGGAACCGTGT",8,61.34,7.87,-2.96,0.16,2.14,1.12,0.01,">1 nonsynonymous","F62V C158S",2
"lib2","SARS-CoV-2","AACCACTAAACCGCAG",10,160.14,8.38,-2.45,0.11,2.5,1.09,0,">1 nonsynonymous","E10L S113N",2
"lib2","SARS-CoV-2","AACCACTAAAGATAGA",2,39.65,10.71,-0.13,0.04,2.88,1.14,0,">1 nonsynonymous","T3S P149A",2
"lib2","SARS-CoV-2","AACCACTAACACAAGT",2,11.83,9.97,-0.87,0.1,2.01,1,0.01,"1 nonsynonymous","A89R",1
"lib2","SARS-CoV-2","AACCACTCACGGCAAA",5,21.26,8.97,-1.87,0.34,1.89,1.08,0.04,">1 nonsynonymous","R136F F156G",2
"lib2","SARS-CoV-2","AACCACTGTAGGACGG",7,33.36,8.67,-2.17,0.19,1.5,1.01,0.02,">1 nonsynonymous","N1S F44P Y123G",3
"lib2","SARS-CoV-2","AACCACTGTCCTATTC",20,26.37,NA,NA,NA,NA,NA,NA,"stop","W23E S45E T63L G83D Y93* I104L N157A",7
"lib2","SARS-CoV-2","AACCACTTAAACAGAT",11,137.55,10.75,-0.08,0.03,2.9,1.11,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","AACCACTTACTGTGTT",7,142.05,10.81,-0.02,0.04,2.95,1.07,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","AACCAGAAACCAGAAG",2,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T I88C Y143T",3
"lib2","SARS-CoV-2","AACCAGAAACCCCCTG",2,22.36,10.13,-0.7,0.08,2.6,1.07,0,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","AACCAGAAATTCCTAT",4,69.72,10.84,0.01,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAGAAGGCACATT",3,67.93,10.21,-0.62,0.05,2.82,1.06,0,">1 nonsynonymous","D59L N64R T148R",3
"lib2","SARS-CoV-2","AACCAGACACGCATGG",4,44.64,10.62,-0.21,0.06,2.86,1.15,0,"1 nonsynonymous","Q84H",1
"lib2","SARS-CoV-2","AACCAGACCAAAGATG",2,26.05,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A33E C158N",2
"lib2","SARS-CoV-2","AACCAGACCAGATTTA",24,108.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S43M F70Y I88E",3
"lib2","SARS-CoV-2","AACCAGACCCGGTATG",6,73.51,10.85,0.02,0.07,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAGAGCCCAGACC",13,143.87,10.79,-0.04,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCAGATAAAAAATA",6,98.3,9.57,-1.26,0.06,2.07,1.08,0,">1 nonsynonymous","E10F V37P N151T",3
"lib2","SARS-CoV-2","AACCAGATAAAATGTA",8,95.77,9.06,-1.77,0.15,1.59,1.1,0.01,">1 nonsynonymous","L38T Y123V",2
"lib2","SARS-CoV-2","AACCAGATGATTCAAA",4,37.13,9.27,-1.57,0.13,1.76,1.12,0.01,">1 nonsynonymous","E10G C61E W106S A192M G196S",5
"lib2","SARS-CoV-2","AACCAGATTAAAAAAA",1,28.55,10.43,-0.41,0.07,2.87,1.11,0,">1 nonsynonymous","K56Y F99W",2
"lib2","SARS-CoV-2","AACCAGATTACCTTTC",7,56.46,6.51,-4.33,0.44,1.5,1.14,0.03,">1 nonsynonymous","S53C T55P E141V G146R",4
"lib2","SARS-CoV-2","AACCAGCATTGAAACG",4,106.46,9.51,-1.32,0.03,2.91,1.13,0,">1 nonsynonymous","G117S L187Q T201L",3
"lib2","SARS-CoV-2","AACCAGCCATCACAAT",5,40.78,8.62,-2.22,0.29,1.5,1,0.04,">1 nonsynonymous","C6T R27M F44I D98S G116M",5
"lib2","SARS-CoV-2","AACCAGCGAAGTTTTG",2,18.12,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R127C E135G",2
"lib2","SARS-CoV-2","AACCAGCTAAGTATGT",2,25.75,8.87,-1.96,0.3,1.5,1.05,0.05,">1 nonsynonymous","R78H I104N T201L",3
"lib2","SARS-CoV-2","AACCAGCTTTACGCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S Y50D N120V R124C C150T G174M",6
"lib2","SARS-CoV-2","AACCAGGAAAAGAGGA",5,84.77,10.7,-0.14,0.03,2.95,1.06,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","AACCAGGAACTGCACC",2,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N N120G V182T S200E",4
"lib2","SARS-CoV-2","AACCAGGACACATACT",6,90.99,10.9,0.06,0.06,2.92,1.08,0,">1 nonsynonymous","D97L F160S",2
"lib2","SARS-CoV-2","AACCAGGAGAATAATA",1,3176.59,9.98,-0.85,0.06,2.38,1.04,0,">1 nonsynonymous","R16P D59P H189L P197W",4
"lib2","SARS-CoV-2","AACCAGGAGCATCAAT",6,83.66,10.82,-0.01,0.05,2.91,1.08,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","AACCAGGGCAAGTAAA",2,47.58,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G86E Y143C",2
"lib2","SARS-CoV-2","AACCAGGTAAACACTC",7,26.45,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","E135L E154N Y178R",3
"lib2","SARS-CoV-2","AACCAGGTTCATTTCT",6,31.51,6,-4.84,1.17,1.5,1.16,0.03,">1 nonsynonymous","K56Y T100P L125R",3
"lib2","SARS-CoV-2","AACCAGTAATCCACAG",3,48.56,9.25,-1.58,0.05,2.83,1.17,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","AACCAGTACAATCATT",12,170.66,10.76,-0.08,0.06,2.9,1.08,0,">1 nonsynonymous","R27L F62Y",2
"lib2","SARS-CoV-2","AACCAGTACGCGACAC",11,70.49,6.68,-4.15,0.3,1.5,1.14,0.01,">1 nonsynonymous","P7A A14K A22Q A89V Y121H S200A",6
"lib2","SARS-CoV-2","AACCAGTCATACATGG",23,78.37,8.04,-2.8,0.25,1.5,1.11,0.02,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","AACCAGTCATATGTCA",3,19.64,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S45Y D68E K94F",3
"lib2","SARS-CoV-2","AACCAGTCTCACATCC",1,34.51,10.06,-0.77,0.06,3,1,0,">1 nonsynonymous","P7T K87L S129K Q144T",4
"lib2","SARS-CoV-2","AACCAGTGAACGATTT",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R T85E D90K D112F K132M",5
"lib2","SARS-CoV-2","AACCAGTGTAAATCCA",1,5.85,8.84,-1.99,0.4,2.2,1.25,0.04,">1 nonsynonymous","A42R Y91D F156V",3
"lib2","SARS-CoV-2","AACCAGTTCAACCGTT",6,55.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N92K S129L",2
"lib2","SARS-CoV-2","AACCAGTTCTCAAGAA",2,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K Y121I V182L",3
"lib2","SARS-CoV-2","AACCAGTTGCGATTGT",2,0.85,NA,NA,NA,NA,NA,NA,"stop","V37* C61S A105H S129E T140W A192L T201Y",7
"lib2","SARS-CoV-2","AACCATAAAAGAAAAC",20,170.91,10.76,-0.08,0.05,2.94,1.06,0,">1 nonsynonymous","N110Q Q163R",2
"lib2","SARS-CoV-2","AACCATAAAATCCACG",4,41.48,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N4T V77G G86W P149V",4
"lib2","SARS-CoV-2","AACCATAAACGTAGAA",1,9.3,10.7,-0.13,0.11,2.92,1.11,0.01,"1 nonsynonymous","T148G",1
"lib2","SARS-CoV-2","AACCATAAAGAACCCG",13,114.38,9.67,-1.16,0.07,1.93,1.08,0,">1 nonsynonymous","R27L N40E D98V A105T",4
"lib2","SARS-CoV-2","AACCATAAAGACGGTA",9,97.46,8.33,-2.51,0.11,2.45,1.04,0.01,">1 nonsynonymous","A18S S113L",2
"lib2","SARS-CoV-2","AACCATAACATAACTG",1,6.82,10.43,-0.41,0.14,2.72,1.23,0.01,"1 nonsynonymous","V65S",1
"lib2","SARS-CoV-2","AACCATAACGACTAAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29M L38V K56Q T148P",4
"lib2","SARS-CoV-2","AACCATAAGACCTAAT",7,22.02,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D98F D112R",2
"lib2","SARS-CoV-2","AACCATAATACGAGTC",7,102.65,9.37,-1.47,0.06,1.87,1.08,0,">1 nonsynonymous","L38S T148N A192T",3
"lib2","SARS-CoV-2","AACCATAATACTATAA",3,27.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44A P161R",2
"lib2","SARS-CoV-2","AACCATACAAGACGAG",5,58.64,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82I D90G L95I Q176S",4
"lib2","SARS-CoV-2","AACCATACAATAATGA",3,12.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y21L L60P P96V V103S",4
"lib2","SARS-CoV-2","AACCATACATGGCGAG",7,40.41,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","N107A N151V L162R T201R",4
"lib2","SARS-CoV-2","AACCATACCCAATGAT",5,11.58,9.06,-1.78,0.36,1.92,1.27,0.06,">1 nonsynonymous","N24M D34I S45G T100F",4
"lib2","SARS-CoV-2","AACCATACCGAGATTA",4,52.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D137V P177F",2
"lib2","SARS-CoV-2","AACCATACGAACCAAG",3,51.22,10.72,-0.11,0.05,2.94,1.07,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","AACCATACTAATAGAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V V32R Y165V",3
"lib2","SARS-CoV-2","AACCATACTATAAATA",2,0.26,NA,NA,NA,NA,NA,NA,"stop","F70* V103L Y178K T201L",4
"lib2","SARS-CoV-2","AACCATACTTCGCGAG",2,1.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACCATAGATGTGCAT",6,55.59,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E10L L60M V173S V182A S184L",5
"lib2","SARS-CoV-2","AACCATAGCCGACATA",5,11.48,6.34,-4.5,0.71,1.5,1.08,0.05,">1 nonsynonymous","N13F S45K D59N Y91N V103Q N109E",6
"lib2","SARS-CoV-2","AACCATAGTACGACTA",5,83.9,10.93,0.1,0.06,2.94,1.08,0,">1 nonsynonymous","N64Y T201N",2
"lib2","SARS-CoV-2","AACCATATGAACGGAC",8,51.02,8.92,-1.91,0.14,1.8,1.09,0.01,">1 nonsynonymous","N13P V32G",2
"lib2","SARS-CoV-2","AACCATATGTCACAAA",7,93.13,9.77,-1.07,0.07,2.79,1.09,0,">1 nonsynonymous","Y123S P169F",2
"lib2","SARS-CoV-2","AACCATATTAATGATG",3,74.72,9.06,-1.77,0.07,2.8,1.1,0,">1 nonsynonymous","S41K Y119D",2
"lib2","SARS-CoV-2","AACCATCAAAATATTT",2,2.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","AACCATCAAGGGTACA",12,2.4,NA,NA,NA,NA,NA,NA,"stop","A42* S129M R136Y T148P G155A Y159S",6
"lib2","SARS-CoV-2","AACCATCACAGATACT",10,67.28,10.93,0.1,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCATCACCACCCCC",9,161.28,10.12,-0.72,0.04,2.54,1.02,0,">1 nonsynonymous","I2F A18L",2
"lib2","SARS-CoV-2","AACCATCAGAGGGCAG",1,39.01,9.73,-1.11,0.14,1.81,1.12,0.01,"1 nonsynonymous","F12R",1
"lib2","SARS-CoV-2","AACCATCATAACCTGG",3,65.22,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V11N K56D A89S Q176R",4
"lib2","SARS-CoV-2","AACCATCATATTGCAT",1,6.11,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","P96H G101I V182G",3
"lib2","SARS-CoV-2","AACCATCCAAAATGAC",21,398.55,10.44,-0.39,0.04,2.94,1.06,0,">1 nonsynonymous","V11I N120V Y175F",3
"lib2","SARS-CoV-2","AACCATCGTTAGAAAC",7,159.09,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","E10L K87N D97H R127Q F167I Q176G",6
"lib2","SARS-CoV-2","AACCATCTATTAAGGC",9,87.67,8.09,-2.75,0.19,1.86,1.06,0.01,">1 nonsynonymous","L95V S113W",2
"lib2","SARS-CoV-2","AACCATGAAATCCCCC",7,22.6,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A89Y W106S F160C",3
"lib2","SARS-CoV-2","AACCATGACAAAGAAA",1,11.86,6.13,-4.7,1.35,3,1.04,0,">1 nonsynonymous","F12R V20S V71I Y93A N120A Y175F T201D",7
"lib2","SARS-CoV-2","AACCATGACACAGTTA",5,0.18,NA,NA,NA,NA,NA,NA,"stop","N4P L38* Y143L C150R F167L K198M",6
"lib2","SARS-CoV-2","AACCATGATAAAAACA",2,20.28,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","K56S V65E T85S V115I Y121P",5
"lib2","SARS-CoV-2","AACCATGATATTAAGC",1,29.2,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","L5F N107C P133N S184I",4
"lib2","SARS-CoV-2","AACCATGCTGTCACAT",8,126.59,8.9,-1.93,0.08,2.8,1.08,0,">1 nonsynonymous","C61Y S113T S147I",3
"lib2","SARS-CoV-2","AACCATGGATTCACTA",2,27.41,6.09,-4.74,0.85,1.5,1.15,0.02,">1 nonsynonymous","P7H F44Y Y91V L122W E135R",5
"lib2","SARS-CoV-2","AACCATGGGATCTCGG",10,67.09,6,-4.84,2,3,1.24,0,">1 nonsynonymous","P7L T55Q I88T P96S V103S R127C",6
"lib2","SARS-CoV-2","AACCATGGGCTCATTA",2,7.77,7.63,-3.21,0.4,1.5,1.08,0.06,">1 nonsynonymous","G9P V37S I72L E76A P82L",5
"lib2","SARS-CoV-2","AACCATGTGTGCTATA",5,83.79,10.8,-0.04,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCATGTTAAGTCCA",2,12.31,8.22,-2.61,0.14,1.55,1.04,0.01,">1 nonsynonymous","F17T A145E",2
"lib2","SARS-CoV-2","AACCATTAAATAAGAT",4,56.49,10.72,-0.12,0.04,2.95,1.05,0,"1 nonsynonymous","T46K",1
"lib2","SARS-CoV-2","AACCATTATAGAAAGC",14,165.31,10.69,-0.15,0.03,2.93,1.08,0,"1 nonsynonymous","E10S",1
"lib2","SARS-CoV-2","AACCATTATGAGACCA",1,20.48,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6S G51V I80K L95C G172W",5
"lib2","SARS-CoV-2","AACCATTCAACAGGAA",4,71.13,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L60R K94F F99L H189D",4
"lib2","SARS-CoV-2","AACCATTGTAATTGAA",4,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G G117K V180R",3
"lib2","SARS-CoV-2","AACCATTGTACGATAT",2,41.04,9.62,-1.22,0.12,1.98,1.13,0.01,">1 nonsynonymous","L5C S41E S139I",3
"lib2","SARS-CoV-2","AACCATTTACTCTCCT",3,22.17,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","K48T N92Q",2
"lib2","SARS-CoV-2","AACCATTTGACGGAGT",5,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86K K94G D137K Y143L",4
"lib2","SARS-CoV-2","AACCATTTTATTATCT",4,75.98,10.66,-0.17,0.04,2.93,1.07,0,">1 nonsynonymous","G9E Q144T",2
"lib2","SARS-CoV-2","AACCCAAAACGTTTAT",9,92.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68G T85L",2
"lib2","SARS-CoV-2","AACCCAAACTCATATT",3,17.27,9.65,-1.19,0.19,1.69,1.04,0.01,">1 nonsynonymous","Y91R D97F S129H P149A",4
"lib2","SARS-CoV-2","AACCCAAAGTCTCCCA",13,191.14,10.18,-0.65,0.04,2.8,1.03,0,"1 nonsynonymous","S69Q",1
"lib2","SARS-CoV-2","AACCCAAATCGATGAT",1,27.66,10.16,-0.67,0.15,2.12,1.04,0.01,">1 nonsynonymous","K26R N40K G51F",3
"lib2","SARS-CoV-2","AACCCAACAAACAGGT",5,53.63,7.33,-3.5,0.31,1.5,1.12,0.02,">1 nonsynonymous","V71N N110S",2
"lib2","SARS-CoV-2","AACCCAACAATACAAT",23,227.04,8.13,-2.7,0.16,1.65,1.17,0.01,">1 nonsynonymous","C6F Y35Q T170N",3
"lib2","SARS-CoV-2","AACCCAACACTCAGAT",8,97,10.81,-0.03,0.03,2.93,1.08,0,"1 nonsynonymous","F160S",1
"lib2","SARS-CoV-2","AACCCAACCAAAAAAA",4,203.18,9.2,-1.63,0.04,2.92,1.04,0,"1 nonsynonymous","G174I",1
"lib2","SARS-CoV-2","AACCCAACCAAAAAAT",5,64.26,7.73,-3.1,0.37,1.5,1,0.05,">1 nonsynonymous","F8Y T55L I88L Y143V",4
"lib2","SARS-CoV-2","AACCCAACCTGACACA",4,27.05,6,-4.84,1.51,1.5,1.12,0.01,">1 nonsynonymous","P96V G155L",2
"lib2","SARS-CoV-2","AACCCAAGACAAAAGT",3,56.81,10.74,-0.1,0.05,2.92,1.07,0,">1 nonsynonymous","C61G L187N",2
"lib2","SARS-CoV-2","AACCCAAGCTGATCGA",3,11.38,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","F47V I72Y N151S",3
"lib2","SARS-CoV-2","AACCCAAGGAATGCCT",11,177.55,10.69,-0.15,0.03,2.95,1.06,0,"1 nonsynonymous","S53P",1
"lib2","SARS-CoV-2","AACCCAAGGATGGATA",3,35.07,9.6,-1.24,0.12,2.02,1.06,0.02,"1 nonsynonymous","F185S",1
"lib2","SARS-CoV-2","AACCCAAGTAACCCTT",1,58.53,9.89,-0.95,0.07,2.86,1.09,0,">1 nonsynonymous","L125G G155A",2
"lib2","SARS-CoV-2","AACCCAAGTATACAGA",1,20.19,10.03,-0.81,0.04,2.02,1,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","AACCCAATCCAGATCC",6,52.47,9.66,-1.18,0.06,2.87,1.12,0,">1 nonsynonymous","I142R P197T",2
"lib2","SARS-CoV-2","AACCCAATTACGGAAC",1,0.77,NA,NA,NA,NA,NA,NA,"stop","I2L V37* R73T I104L S147T",5
"lib2","SARS-CoV-2","AACCCACAAAAAAGTA",10,37.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44L F70L T170N",3
"lib2","SARS-CoV-2","AACCCACAAAGAATAA",8,140.15,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C31V R127N D137Y Y143S",4
"lib2","SARS-CoV-2","AACCCACAACCTCGAG",1,22.04,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A14E N30D T85M Y91A G116L F134P",6
"lib2","SARS-CoV-2","AACCCACAACTAGAAT",3,43.77,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y159S Y175M",2
"lib2","SARS-CoV-2","AACCCACAATAATCTT",4,73.78,10.14,-0.7,0.04,2.66,1.05,0,">1 nonsynonymous","S36R D59V N130L",3
"lib2","SARS-CoV-2","AACCCACAATCATTAA",3,8.03,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6R F12S A81R",3
"lib2","SARS-CoV-2","AACCCACATAAGTTGG",17,281.59,10.75,-0.09,0.04,2.91,1.08,0,">1 nonsynonymous","A42F T85S",2
"lib2","SARS-CoV-2","AACCCACATACTGCAA",9,66.58,9.74,-1.09,0.08,2.34,1.04,0,">1 nonsynonymous","L95C V115E V173M K198T",4
"lib2","SARS-CoV-2","AACCCACCAGTAAATC",12,221.55,10.65,-0.19,0.02,2.89,1.07,0,">1 nonsynonymous","A42V T55P",2
"lib2","SARS-CoV-2","AACCCACCTCGAACTA",2,107.75,10.12,-0.71,0.04,2.92,1.08,0,">1 nonsynonymous","S147T Q176M",2
"lib2","SARS-CoV-2","AACCCACGAAAAAAAA",4,70.67,10.81,-0.02,0.05,2.89,1.12,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","AACCCACGCAAATAAG",11,125.83,10.7,-0.14,0.03,2.93,1.09,0,">1 nonsynonymous","T46Y T63D",2
"lib2","SARS-CoV-2","AACCCACGCCATCCAC",12,84.9,10.8,-0.04,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCACTATTGCGCA",7,152.17,10.86,0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCACTCACCTTTC",5,47.71,9.7,-1.14,0.05,2.79,1.05,0,">1 nonsynonymous","N118A K128L N151D",3
"lib2","SARS-CoV-2","AACCCACTCTTGCGTA",7,131.7,7.49,-3.34,0.1,2.01,1.12,0,">1 nonsynonymous","V37S G116F Y175S",3
"lib2","SARS-CoV-2","AACCCACTGACATTTT",5,0.23,NA,NA,NA,NA,NA,NA,"stop","S69G F160* F167V",3
"lib2","SARS-CoV-2","AACCCACTGTGATGTA",1,1.96,NA,NA,NA,NA,NA,NA,"stop","V11I T46* L60*",3
"lib2","SARS-CoV-2","AACCCACTTCAATCCC",1,22.3,10.2,-0.63,0.1,2.88,1.09,0,">1 nonsynonymous","Y35V S139G F160N P169K",4
"lib2","SARS-CoV-2","AACCCAGAGAACTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114E T201D",2
"lib2","SARS-CoV-2","AACCCAGAGCGCATTC",2,3.19,NA,NA,NA,NA,NA,NA,"stop","K56* K87L",2
"lib2","SARS-CoV-2","AACCCAGATCATATCA",3,47.81,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I28C G51E T63I Q84V K128V N157L",6
"lib2","SARS-CoV-2","AACCCAGCAACCCGTA",10,132.94,10.09,-0.74,0.05,2.41,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","AACCCAGGAGCGCTAT",8,52.37,6,-4.84,1.08,1.5,1.17,0.01,">1 nonsynonymous","N130R V173G R179A",3
"lib2","SARS-CoV-2","AACCCAGGTATCTAAA",5,75.84,10.78,-0.06,0.06,2.9,1.08,0,"1 nonsynonymous","I138V",1
"lib2","SARS-CoV-2","AACCCAGGTGGTGCGC",2,0.96,NA,NA,NA,NA,NA,NA,"stop","V52L I80* N118S L131Y Y159H",5
"lib2","SARS-CoV-2","AACCCAGTAACCACTA",4,1.99,NA,NA,NA,NA,NA,NA,"stop","F8* V37A C61A G83C",4
"lib2","SARS-CoV-2","AACCCAGTATGTTTAA",1,104.05,10.71,-0.13,0.05,2.93,1.09,0,"1 nonsynonymous","S129F",1
"lib2","SARS-CoV-2","AACCCAGTCTTTTGGT",1,2.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","AACCCAGTGTCGTTAA",12,275.99,10.1,-0.74,0.03,2.84,1.07,0,">1 nonsynonymous","C31H Y39V",2
"lib2","SARS-CoV-2","AACCCAGTTATAGGGG",6,45.26,9.72,-1.11,0.07,1.89,1.11,0,">1 nonsynonymous","S69Q Q84R A190H",3
"lib2","SARS-CoV-2","AACCCATCAATTTCTA",10,42.49,6,-4.84,2,3,1.23,0,">1 nonsynonymous","L5F V37I D112G Q163N",4
"lib2","SARS-CoV-2","AACCCATGAACCTGGC",6,102.34,9.6,-1.24,0.04,2.9,1.07,0,">1 nonsynonymous","E76W F160P",2
"lib2","SARS-CoV-2","AACCCATGACAGACAG",10,181.28,10.19,-0.65,0.03,2.77,1.03,0,">1 nonsynonymous","V52I F99Y T201G",3
"lib2","SARS-CoV-2","AACCCATGACTCCTGA",1,17.72,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Y39P V77N Y119A R179K",4
"lib2","SARS-CoV-2","AACCCATGGCGCGCTT",5,14.21,6,-4.84,2,1.5,1.1,0.03,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","AACCCATTAGGTAGCA",5,0.18,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","AACCCATTCCAGGCAC",1,31.78,10.74,-0.1,0.07,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCCAAGCTACAGA",4,252.63,8.96,-1.88,0.06,2.86,1.12,0,">1 nonsynonymous","L5F N64L L125Y",3
"lib2","SARS-CoV-2","AACCCCAATGAGTCAA",6,54.09,6.4,-4.44,0.54,1.5,1.17,0.02,">1 nonsynonymous","G86Y G174S",2
"lib2","SARS-CoV-2","AACCCCACCCCAAGCG",3,0,NA,NA,NA,NA,NA,NA,"stop","F44* D98W G155Y",3
"lib2","SARS-CoV-2","AACCCCACTTCCGGGA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R V103F",2
"lib2","SARS-CoV-2","AACCCCAGGCATCAAT",2,13.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F47M C61F D90T N107R L125P C158H K199W",7
"lib2","SARS-CoV-2","AACCCCATACTCAGTG",1,27.11,8.4,-2.44,0.23,1.73,1.07,0.02,">1 nonsynonymous","S19Q N171G",2
"lib2","SARS-CoV-2","AACCCCCAAATAACGG",7,96.92,10.87,0.04,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCCCAGGAACTTT",6,163.78,7.6,-3.24,0.12,2.02,1.13,0,"1 nonsynonymous","C158E",1
"lib2","SARS-CoV-2","AACCCCCATACAGACT",7,1.73,NA,NA,NA,NA,NA,NA,"stop","E10D T46* F185H",3
"lib2","SARS-CoV-2","AACCCCCATTATATCC",3,0.67,NA,NA,NA,NA,NA,NA,"stop","L57G Q144T Q176*",3
"lib2","SARS-CoV-2","AACCCCCTGTATCCTT",18,70.8,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","A14H Y91S T100P K132E S147C F160S",6
"lib2","SARS-CoV-2","AACCCCCTGTCCTGAA",3,41.5,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K87L N107T G117I L122E R136Y",5
"lib2","SARS-CoV-2","AACCCCCTTCACGTAT",1,13.7,9.46,-1.37,0.08,2.77,1.18,0.01,">1 nonsynonymous","D97I T170R",2
"lib2","SARS-CoV-2","AACCCCGAAGGCTACT",1,5.43,6.19,-4.64,0.41,3,1.25,0.01,">1 nonsynonymous","F44N D137H",2
"lib2","SARS-CoV-2","AACCCCGACTGAAGAC",3,1.55,NA,NA,NA,NA,NA,NA,"stop","N4H A14T C49S V71* T85R",5
"lib2","SARS-CoV-2","AACCCCGAGACCCCAC",1,14.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5F F12A T63V Y119T C150F G174R",6
"lib2","SARS-CoV-2","AACCCCGATCAAACCA",5,71.02,8.39,-2.45,0.12,2.92,1.05,0.01,"1 nonsynonymous","Y175A",1
"lib2","SARS-CoV-2","AACCCCGCACATTAGA",2,42.98,10.81,-0.03,0.07,2.86,1.17,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","AACCCCGGCCAGGCAA",3,11.79,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","L95H S108P",2
"lib2","SARS-CoV-2","AACCCCTAAAAGTATA",5,1.13,NA,NA,NA,NA,NA,NA,"stop","F44* K56A N118V Y143L P149N F185D",6
"lib2","SARS-CoV-2","AACCCCTAATGACACG",3,29.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3G V37K K48V I72K P161V G172M",6
"lib2","SARS-CoV-2","AACCCCTACGCAATTA",1,53.52,10.77,-0.06,0.05,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","AACCCCTAGTAAAACG",2,8.32,8.09,-2.74,0.57,1.5,1.12,0.06,">1 nonsynonymous","C6R S41N A89V",3
"lib2","SARS-CoV-2","AACCCCTAGTATGTAA",7,0.16,NA,NA,NA,NA,NA,NA,"stop","N30Y C61T A89D V103* F167L K198L",6
"lib2","SARS-CoV-2","AACCCCTCTAAACTCC",9,21.14,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A81D P96Q A105H Y121L V173K",5
"lib2","SARS-CoV-2","AACCCCTGAACAGACT",3,88.31,10.46,-0.37,0.07,2.99,1.03,0,"1 nonsynonymous","Y178V",1
"lib2","SARS-CoV-2","AACCCCTGGAACAGTC",3,55.69,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S36V L95T V103C K114N",4
"lib2","SARS-CoV-2","AACCCCTTGTGATACT",7,32.28,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","G51F A67R R127A C158G",4
"lib2","SARS-CoV-2","AACCCGACAATTATTG",10,54.75,9.45,-1.38,0.11,1.89,1.07,0,">1 nonsynonymous","W106L G116A",2
"lib2","SARS-CoV-2","AACCCGACATTTTCTA",1,14.88,6,-4.84,2,3,1.05,0,">1 nonsynonymous","N4S I28C N107K S113I K132M G146V",6
"lib2","SARS-CoV-2","AACCCGAGAAAGGAAA",2,5.76,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V37Y G83L I104E G174V",4
"lib2","SARS-CoV-2","AACCCGAGGTTACGAC",4,28.89,10.81,-0.02,0.07,2.88,1.12,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","AACCCGATAGAACACC",1,20.98,10.18,-0.65,0.07,2.88,1.05,0,">1 nonsynonymous","K132N G174T",2
"lib2","SARS-CoV-2","AACCCGATTGCAAACT",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G101Q S129A",3
"lib2","SARS-CoV-2","AACCCGCATTCTAAGT",1,45.71,10.12,-0.72,0.06,2.84,1.08,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","AACCCGCCAATGAATT",2,8,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","S41H A89C D98K K128M R136S N157F",6
"lib2","SARS-CoV-2","AACCCGCGCTATACTG",2,118.91,8.4,-2.44,0.07,2.56,1.12,0,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","AACCCGCGTGGTTACT",6,78.77,10.66,-0.18,0.03,2.92,1.09,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","AACCCGGAACGATAAG",7,95.07,10.87,0.03,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCGGACCAGCTAA",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I K94R V103L",3
"lib2","SARS-CoV-2","AACCCGGATACTATGG",17,232.82,10.72,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","A81Q",1
"lib2","SARS-CoV-2","AACCCGGTATGCGCTT",1,16.92,7.07,-3.76,0.37,1.5,1.15,0.03,">1 nonsynonymous","T46F K94E",2
"lib2","SARS-CoV-2","AACCCGGTCTACGTAC",3,6.37,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","D137E P149L V180P",3
"lib2","SARS-CoV-2","AACCCGGTTTATGTGC",7,43.55,8.28,-2.56,0.15,1.95,1.06,0.01,">1 nonsynonymous","A33L E154H Y165M",3
"lib2","SARS-CoV-2","AACCCGTCTATATTTT",15,120.4,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","V20R",1
"lib2","SARS-CoV-2","AACCCGTGCCAGTTAT",12,51.64,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","V71H",1
"lib2","SARS-CoV-2","AACCCTAACCGATCTG",4,31.78,10.84,0,0.06,3,1.01,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","AACCCTAACCGTGCCT",4,62.6,10.83,-0.01,0.04,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCTAAGTAGAATC",3,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y I72L T85L D98E",4
"lib2","SARS-CoV-2","AACCCTAATTAGACAA",5,18.53,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F12S T15D C49F P169L V173R H189Y",6
"lib2","SARS-CoV-2","AACCCTACATAAATTT",7,43.46,10.27,-0.57,0.08,2.85,1.08,0,">1 nonsynonymous","T63Y G116S I142V",3
"lib2","SARS-CoV-2","AACCCTACCTAATACA",9,55.35,9.48,-1.36,0.18,1.5,1.06,0.01,"1 nonsynonymous","I104Q",1
"lib2","SARS-CoV-2","AACCCTACGATAATGG",2,12.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6N T63M I88D N120M S139G C158T",6
"lib2","SARS-CoV-2","AACCCTAGTAGCTATC",11,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S D75L S113H",3
"lib2","SARS-CoV-2","AACCCTAGTTATCTCA",7,109.24,8.33,-2.51,0.1,2.47,1.05,0,">1 nonsynonymous","L5D G146I",2
"lib2","SARS-CoV-2","AACCCTAGTTCAACAA",1,22.98,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T3R S36D S41V K48R N107V S113P R136Y C150A L188I",9
"lib2","SARS-CoV-2","AACCCTATCACCTAAG",2,125.35,10.82,-0.02,0.03,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCCTCAAAAGAAAA",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V S45M L60A T140G",4
"lib2","SARS-CoV-2","AACCCTCATCTACATG",7,43.44,10.79,-0.04,0.11,2.95,1.06,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","AACCCTCCGAATACCT",4,5.65,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","P7M A22P F99G G146A N151S",5
"lib2","SARS-CoV-2","AACCCTCTATCAATTC",5,88.87,7.1,-3.74,0.11,1.5,1.07,0,">1 nonsynonymous","R16D D34S Y175L",3
"lib2","SARS-CoV-2","AACCCTCTATGTCAAA",4,29.93,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V77N Q176A",2
"lib2","SARS-CoV-2","AACCCTCTTTGATTTG",4,14.93,8.97,-1.87,0.17,1.58,1.03,0.01,"1 nonsynonymous","R127D",1
"lib2","SARS-CoV-2","AACCCTGAAAACTTGG",4,63.72,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N4Y S43D S53L L95A Y119S F134C V153S C158S",8
"lib2","SARS-CoV-2","AACCCTGACCGGGAGG",14,167.16,10.16,-0.68,0.06,2.75,1.06,0,">1 nonsynonymous","S41N D112E Y121M",3
"lib2","SARS-CoV-2","AACCCTTGGAATGCAG",1,4.21,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AACCCTTGGTAGCGCA",7,4.16,NA,NA,NA,NA,NA,NA,"stop","F8C K94* S108P",3
"lib2","SARS-CoV-2","AACCCTTTAATCATGA",1,30.07,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S36V T46L G86V",3
"lib2","SARS-CoV-2","AACCCTTTTGTTTTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* A105L N110L F185Y",4
"lib2","SARS-CoV-2","AACCGAACAGAACTAG",7,171.8,10.37,-0.46,0.04,2.96,1.06,0,">1 nonsynonymous","S45T F156A",2
"lib2","SARS-CoV-2","AACCGAACCCATCCCA",3,91.64,9.78,-1.06,0.09,2.14,1.05,0,">1 nonsynonymous","T3R C31S F44V",3
"lib2","SARS-CoV-2","AACCGAACCGTCCACG",1,20.34,9.42,-1.41,0.13,1.64,1.01,0.01,">1 nonsynonymous","F44S R136N",2
"lib2","SARS-CoV-2","AACCGAACCTTTAGCG",2,37.4,10.73,-0.11,0.08,2.87,1.1,0,">1 nonsynonymous","E141N F160G",2
"lib2","SARS-CoV-2","AACCGAACTACATTAA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104F I142T",2
"lib2","SARS-CoV-2","AACCGAACTCATAATA",10,160.75,10.49,-0.35,0.03,2.89,1.08,0,"1 nonsynonymous","R127K",1
"lib2","SARS-CoV-2","AACCGAACTTCGCTGG",2,18.8,10.54,-0.3,0.09,2.71,1.12,0,">1 nonsynonymous","A67L D90F V173L",3
"lib2","SARS-CoV-2","AACCGAAGTATAAATA",11,10.32,NA,NA,NA,NA,NA,NA,"stop","G9C Y50S G83N K94* S184P S200L",6
"lib2","SARS-CoV-2","AACCGAATAACCAATA",5,101.98,10.27,-0.57,0.04,2.95,1.01,0,">1 nonsynonymous","V77L K94N T100F",3
"lib2","SARS-CoV-2","AACCGAATAATTAGAA",9,84.55,6.4,-4.44,0.58,1.5,1.22,0.02,">1 nonsynonymous","S53A D112G",2
"lib2","SARS-CoV-2","AACCGAATTACCCAAA",13,114.37,6,-4.84,1.32,1.5,1.17,0.01,">1 nonsynonymous","Y50M G117F",2
"lib2","SARS-CoV-2","AACCGAATTTCCCGAA",1,12.23,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","Y35M V71K Y91V P149V",4
"lib2","SARS-CoV-2","AACCGAATTTTCTATT",2,28.38,6.02,-4.81,1.38,1.5,1.2,0.03,">1 nonsynonymous","V37N V103L Q144R",3
"lib2","SARS-CoV-2","AACCGACAACCCCGGT",6,49.28,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P54S C102V P149I G155E",4
"lib2","SARS-CoV-2","AACCGACAAGTTCTCA",4,50.92,8.39,-2.45,0.13,1.84,1.08,0.01,">1 nonsynonymous","N107H P149M",2
"lib2","SARS-CoV-2","AACCGACAATTACGTA",5,77.5,10.81,-0.03,0.02,2.95,1.07,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","AACCGACACAATACTG",8,68.44,10.43,-0.41,0.06,2.85,1.12,0,">1 nonsynonymous","F12L Y39T F44L F160K",4
"lib2","SARS-CoV-2","AACCGACACGAAAAAC",1,33.16,10.8,-0.04,0.06,2.91,1.12,0,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","AACCGACACTGTGATA",3,73.2,10.81,-0.03,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCGACCAAGCCAAG",2,18.21,10.65,-0.18,0.04,2.91,1.09,0,"1 nonsynonymous","S184L",1
"lib2","SARS-CoV-2","AACCGACCCAAATCCC",15,183.22,10.31,-0.53,0.05,2.88,1.1,0,">1 nonsynonymous","T63C V115T P149T",3
"lib2","SARS-CoV-2","AACCGACGCTGTACCA",5,29.48,10.77,-0.07,0.06,2.77,1.18,0,"1 nonsynonymous","K199C",1
"lib2","SARS-CoV-2","AACCGACTAACTTACC",5,17.28,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C61K Q84F P96L G155A",4
"lib2","SARS-CoV-2","AACCGACTTCAAGCAA",6,32.47,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A81S L131P I138T F160I K198L",5
"lib2","SARS-CoV-2","AACCGACTTGAATGGA",3,63.39,10.88,0.04,0.05,2.99,1.03,0,"1 nonsynonymous","S164N",1
"lib2","SARS-CoV-2","AACCGAGAAAAACCCG",4,71.07,9.55,-1.28,0.05,2.89,1.11,0,">1 nonsynonymous","L60T T100C F156H G174A",4
"lib2","SARS-CoV-2","AACCGAGAATCAATAC",2,61.38,10.51,-0.33,0.05,2.96,1.04,0,"1 nonsynonymous","G116F",1
"lib2","SARS-CoV-2","AACCGAGATATACTAT",6,50.75,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9S S45L G83V N118C V173R",5
"lib2","SARS-CoV-2","AACCGAGGAAGATTAA",1,17.77,9.73,-1.1,0.12,2.16,1.01,0.01,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","AACCGAGGGAATAAAA",5,2.36,NA,NA,NA,NA,NA,NA,"stop","E10M K26* A42H N157Y S184D T201W",6
"lib2","SARS-CoV-2","AACCGAGTATGGGTGA",6,137.73,8.23,-2.61,0.15,1.89,1.05,0.01,">1 nonsynonymous","C6W G117R S200I",3
"lib2","SARS-CoV-2","AACCGATACACAATGG",2,1.37,NA,NA,NA,NA,NA,NA,"stop","T3R C150*",2
"lib2","SARS-CoV-2","AACCGATGGACGCCAA",7,1.3,NA,NA,NA,NA,NA,NA,"stop","R16* E141R G152F R179T",4
"lib2","SARS-CoV-2","AACCGATGGCAAATAG",14,140.35,10.71,-0.12,0.03,2.98,1.02,0,">1 nonsynonymous","L5T S43P V153S",3
"lib2","SARS-CoV-2","AACCGATTCATCGACT",7,70.29,8.75,-2.09,0.07,2.93,1.09,0,">1 nonsynonymous","C61D A105S Y119L",3
"lib2","SARS-CoV-2","AACCGCAACACATGAG",12,81.92,7.98,-2.86,0.24,1.5,1.02,0.02,">1 nonsynonymous","K94R D137W",2
"lib2","SARS-CoV-2","AACCGCAATGAATGCC",2,29.12,8.9,-1.93,0.3,1.61,1.11,0.03,">1 nonsynonymous","Y35H A89V",2
"lib2","SARS-CoV-2","AACCGCACATCTTGGG",1,53.38,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","S41C K128D F134S P177W",4
"lib2","SARS-CoV-2","AACCGCACCCACATGG",3,36.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8M N13T A89T Y178S",4
"lib2","SARS-CoV-2","AACCGCACGATTAAGC",6,27.15,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V103G Y119L E141I G155L",4
"lib2","SARS-CoV-2","AACCGCAGAGCCCGAG",6,41.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I28G F99A V115Y Y143L",4
"lib2","SARS-CoV-2","AACCGCAGCAGTAAGG",1,57.42,10.75,-0.09,0.04,2.95,1.08,0,"1 nonsynonymous","Y66V",1
"lib2","SARS-CoV-2","AACCGCAGTAGCTGAT",2,14.2,9.51,-1.32,0.3,2.28,1.17,0.03,">1 nonsynonymous","C61M C102V",2
"lib2","SARS-CoV-2","AACCGCATAATAAGGC",1,38.46,8.07,-2.77,0.45,1.5,1,0.07,">1 nonsynonymous","V77T P96Y N118V",3
"lib2","SARS-CoV-2","AACCGCCACCTGTACT",1,12.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1R A14H N58R G74S G83T K87V",6
"lib2","SARS-CoV-2","AACCGCCCAAAATTGG",7,34.73,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y39I C49T G86F P96Y",4
"lib2","SARS-CoV-2","AACCGCCCAGGGCAAT",17,5.2,NA,NA,NA,NA,NA,NA,"stop","T3N P82K G155* F167K K198Y",5
"lib2","SARS-CoV-2","AACCGCCCATGTATGT",7,122.77,10.83,-0.01,0.07,2.83,1.17,0,"1 nonsynonymous","P149A",1
"lib2","SARS-CoV-2","AACCGCCCGTTACCTA",5,39.02,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","K26W D112Q",2
"lib2","SARS-CoV-2","AACCGCCCTATAACGC",4,40.73,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I80W I88R A105Q Q168G",4
"lib2","SARS-CoV-2","AACCGCCGGTCATAAT",2,23.44,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K87S L95K",2
"lib2","SARS-CoV-2","AACCGCCTTTGCAAGT",5,49.28,9.79,-1.04,0.12,1.87,1.02,0,">1 nonsynonymous","T55G P96M",2
"lib2","SARS-CoV-2","AACCGCGAGAAATAAC",2,22.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q W106S",2
"lib2","SARS-CoV-2","AACCGCGCTATTCCAA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","L5H L57* K198T",3
"lib2","SARS-CoV-2","AACCGCGTTTGATCCA",2,8.25,8.14,-2.7,0.61,1.71,1.28,0.07,">1 nonsynonymous","Y50H V71T Y119R",3
"lib2","SARS-CoV-2","AACCGCTAATCAAGAG",6,826.63,10.15,-0.68,0.03,2.91,1,0,"1 nonsynonymous","C6Y",1
"lib2","SARS-CoV-2","AACCGCTCCCGCACAC",5,11.25,10.65,-0.18,0.09,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","AACCGCTCCTAGAATG",3,35.74,9.45,-1.38,0.15,1.86,1.04,0.01,">1 nonsynonymous","T55Q C61P N171F Q176W",4
"lib2","SARS-CoV-2","AACCGCTCTTCATAAT",1,7.27,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","A22I G51V",2
"lib2","SARS-CoV-2","AACCGCTTACAGAAAA",13,47.49,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F12D R25F K56S K87V G117F T140S C150L",7
"lib2","SARS-CoV-2","AACCGCTTGAACATTC",2,42.21,9.2,-1.63,0.14,1.81,1.08,0.01,">1 nonsynonymous","Y35D S45W",2
"lib2","SARS-CoV-2","AACCGCTTGGGCTACC",22,177.23,6.76,-4.08,0.21,1.5,1.13,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","AACCGCTTTGATTCTG",1,3.01,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AACCGGAAACAAAAAA",3,17.87,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T55L G101Y Y119V Y178R A190V",5
"lib2","SARS-CoV-2","AACCGGAAAGGAACTT",3,0.09,NA,NA,NA,NA,NA,NA,"stop","A42* T63D F167*",3
"lib2","SARS-CoV-2","AACCGGAAAGTAAGAA",6,1.91,NA,NA,NA,NA,NA,NA,"stop","I28* D90K L125E",3
"lib2","SARS-CoV-2","AACCGGAAATAGAAGG",6,78.78,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V20L D112E Q168L",3
"lib2","SARS-CoV-2","AACCGGAACTGATAAA",3,52.75,10.68,-0.16,0.06,2.94,1.1,0,"1 nonsynonymous","Y123H",1
"lib2","SARS-CoV-2","AACCGGACCGTGCGGA",9,2.76,NA,NA,NA,NA,NA,NA,"stop","L5* I28* P82L Y121I N157F V173N",6
"lib2","SARS-CoV-2","AACCGGACCTATTTTA",4,89.95,9.9,-0.94,0.09,2.29,1.05,0,">1 nonsynonymous","P133H S139N",2
"lib2","SARS-CoV-2","AACCGGACGGCCGGTG",1,48.63,8.96,-1.88,0.09,2.75,1.14,0,">1 nonsynonymous","V37R F62T G155P",3
"lib2","SARS-CoV-2","AACCGGAGGGACTTTA",3,59.13,10.35,-0.49,0.05,2.81,1.16,0,">1 nonsynonymous","S45Q N120W",2
"lib2","SARS-CoV-2","AACCGGATAGACTACG",2,137.67,10.51,-0.33,0.04,2.92,1.05,0,">1 nonsynonymous","E10H L131I",2
"lib2","SARS-CoV-2","AACCGGATCCCCGCAG",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F V32S Y50S T148M Q168R S184F S200P",7
"lib2","SARS-CoV-2","AACCGGCAACAATTTT",10,63.25,9.63,-1.21,0.07,2.18,1.07,0,">1 nonsynonymous","C6L D34Y",2
"lib2","SARS-CoV-2","AACCGGCAGTGCTTTA",6,53.84,10.81,-0.02,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCGGCATTACGCAT",4,62.41,10.05,-0.78,0.09,2.5,1.08,0,">1 nonsynonymous","T3F A105G",2
"lib2","SARS-CoV-2","AACCGGCTATCATACA",1,38.55,10.75,-0.08,0.08,2.88,1.1,0,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","AACCGGGCATGGTGCC",8,73.19,8.36,-2.48,0.26,1.5,1.01,0.03,">1 nonsynonymous","S45R D90H N120I",3
"lib2","SARS-CoV-2","AACCGGGGGGCCTCAG",9,274.15,10.09,-0.74,0.06,2.58,1.05,0,"1 nonsynonymous","A81D",1
"lib2","SARS-CoV-2","AACCGGGTCTATAAAG",2,23.6,10.9,0.07,0.07,2.95,1.07,0,">1 nonsynonymous","R16F T201S",2
"lib2","SARS-CoV-2","AACCGTAAAACAAAGC",2,65.7,9.15,-1.69,0.05,2.88,1.12,0,"1 nonsynonymous","G117D",1
"lib2","SARS-CoV-2","AACCGTAAATTCTTAA",5,92.06,10.19,-0.64,0.04,2.96,1.07,0,">1 nonsynonymous","Y39Q F156S",2
"lib2","SARS-CoV-2","AACCGTAACTAAGAAT",1,32.3,9.62,-1.22,0.14,1.88,1.16,0.01,"1 nonsynonymous","V65N",1
"lib2","SARS-CoV-2","AACCGTAAGAGTTGCT",9,71.33,7.39,-3.44,0.36,1.5,1.19,0.04,">1 nonsynonymous","F47Y D90L A105C P191R T201S",5
"lib2","SARS-CoV-2","AACCGTAATGGACGGC",4,129.47,10.37,-0.47,0.05,2.95,1.01,0,">1 nonsynonymous","P7C R27L",2
"lib2","SARS-CoV-2","AACCGTAATTTTTTAT",6,0,NA,NA,NA,NA,NA,NA,"stop","F8C I88*",2
"lib2","SARS-CoV-2","AACCGTACAATCCATA",11,125.71,10.65,-0.18,0.02,2.97,1.04,0,">1 nonsynonymous","L111I E186G",2
"lib2","SARS-CoV-2","AACCGTACTTAGTAGC",2,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L N120Q L131K",3
"lib2","SARS-CoV-2","AACCGTAGACTTCGAG",6,40.66,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F8S Y91V N171S",3
"lib2","SARS-CoV-2","AACCGTCAATCTGTTG",4,21.17,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L57Y I104R",2
"lib2","SARS-CoV-2","AACCGTCATTCATAAT",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S I142A",2
"lib2","SARS-CoV-2","AACCGTCATTTGCTGC",5,6.75,NA,NA,NA,NA,NA,NA,"stop","S41* I80T D97V Y175S",4
"lib2","SARS-CoV-2","AACCGTCCACAATCAT",2,0.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","AACCGTCCTACCCAAA",4,53.11,8.84,-2,0.2,1.5,1,0.02,">1 nonsynonymous","V52S N107G",2
"lib2","SARS-CoV-2","AACCGTCTAAATCCCC",5,7.71,NA,NA,NA,NA,NA,NA,"stop","S129V F156*",2
"lib2","SARS-CoV-2","AACCGTCTCGAATATG",13,109.04,6.14,-4.7,0.91,1.5,1.19,0.03,">1 nonsynonymous","F44R G86R L95S",3
"lib2","SARS-CoV-2","AACCGTCTGTTTGAAT",4,46.69,8.91,-1.92,0.21,1.5,1,0.02,">1 nonsynonymous","I80M D90Y",2
"lib2","SARS-CoV-2","AACCGTGACTTCCATC",7,2.65,NA,NA,NA,NA,NA,NA,"stop","K56N R136E G172*",3
"lib2","SARS-CoV-2","AACCGTGCTACTCAAT",1,7.53,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A81S F99T",2
"lib2","SARS-CoV-2","AACCGTGTCGGTGACG",14,42.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N30R C49M P82Q K94F S139Y R179P",6
"lib2","SARS-CoV-2","AACCGTGTTACAAAAA",3,0.31,NA,NA,NA,NA,NA,NA,"stop","C6K A89Y K114* Y165S",4
"lib2","SARS-CoV-2","AACCGTTAAAGTGTCA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","A81I S129*",2
"lib2","SARS-CoV-2","AACCGTTAGTCATTAT",4,33.19,7.76,-3.08,0.11,1.69,1.09,0,">1 nonsynonymous","Y66K G146M",2
"lib2","SARS-CoV-2","AACCGTTCACCTGGTG",2,2.24,NA,NA,NA,NA,NA,NA,"stop","R27V Y35L T55* G74F N107V I138L Q176S",7
"lib2","SARS-CoV-2","AACCGTTCTTCCCCGC",4,56.61,10.75,-0.09,0.04,2.92,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AACCGTTTAAATAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45M Y66L",2
"lib2","SARS-CoV-2","AACCGTTTGGCAGTCG",12,1.35,NA,NA,NA,NA,NA,NA,"stop","S41L K56* Y165G G196C",4
"lib2","SARS-CoV-2","AACCTAAAAAACAAAT",5,15.77,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N40Y L60W A67N A105S K132I S139R",6
"lib2","SARS-CoV-2","AACCTAAAAAGCCCTA",3,10.54,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A33S R73Y R124Q P133I F160H Y178C P197S",7
"lib2","SARS-CoV-2","AACCTAAACAACTACT",19,325.02,10.24,-0.59,0.03,2.97,1.04,0,">1 nonsynonymous","L5H S36G K87L D97K G152D K198T",6
"lib2","SARS-CoV-2","AACCTAAACCTATTCC",2,56.9,7.25,-3.59,0.38,1.99,1.19,0.03,">1 nonsynonymous","T140R Y175T",2
"lib2","SARS-CoV-2","AACCTAAACGACTATA",3,62.15,10.71,-0.13,0.03,2.92,1.08,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","AACCTAAAGAAAGGAT",10,76.12,7.57,-3.26,0.28,1.5,1.19,0.01,">1 nonsynonymous","K87D Y91I E141L",3
"lib2","SARS-CoV-2","AACCTAAATACGCACA",2,2.56,NA,NA,NA,NA,NA,NA,"stop","P82* I142H P197T",3
"lib2","SARS-CoV-2","AACCTAACAAAGTAAC",7,37.94,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","S53L L60M I80P C102N L187Y",5
"lib2","SARS-CoV-2","AACCTAACAGTCGTAT",3,23.91,10.88,0.04,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTAACATACTAAG",7,94.46,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","C6L A14H A33P A42L D90H I138W Q176K",7
"lib2","SARS-CoV-2","AACCTAACATCATAGC",4,68.63,10.02,-0.81,0.08,2.56,1.07,0,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","AACCTAACCAAGAGAA",7,52.19,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91T N107T T148G",3
"lib2","SARS-CoV-2","AACCTAACGAGTAACA",1,17.35,10.22,-0.61,0.07,2.97,1.07,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","AACCTAACGATAGGGC",1,37.93,10.93,0.1,0.07,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTAACGATCATGT",1,1.71,NA,NA,NA,NA,NA,NA,"stop","L38V C49R R127*",3
"lib2","SARS-CoV-2","AACCTAACTAAGTAGA",7,90.5,6,-4.84,1.31,1.5,1.23,0.02,">1 nonsynonymous","C31P F44R T140P",3
"lib2","SARS-CoV-2","AACCTAAGAAAAAATA",2,38.93,8.38,-2.46,0.13,2.81,1.04,0.01,">1 nonsynonymous","K87C N157M P197L",3
"lib2","SARS-CoV-2","AACCTAAGACCCACAC",1,0.14,NA,NA,NA,NA,NA,NA,"stop","T46* N110M",2
"lib2","SARS-CoV-2","AACCTAAGGCGAAATG",14,277.88,10.72,-0.12,0.04,2.97,1.06,0,">1 nonsynonymous","V32E C61Q I142V P197N",4
"lib2","SARS-CoV-2","AACCTAAGGTTTAAAA",10,0.87,NA,NA,NA,NA,NA,NA,"stop","N30G A42V D98*",3
"lib2","SARS-CoV-2","AACCTAAGTTTATTTC",11,62.89,6.12,-4.72,0.8,1.5,1.14,0.02,">1 nonsynonymous","P7L N58D G152H Y165N T201A",5
"lib2","SARS-CoV-2","AACCTAATAACACTTT",3,33.45,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12G F99T K114G N120M Q163H",5
"lib2","SARS-CoV-2","AACCTAATGCTGAGAT",2,45.56,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I88G G174T",2
"lib2","SARS-CoV-2","AACCTACACAAACCAT",3,9.8,6.17,-4.67,2,3,1.08,0.01,">1 nonsynonymous","Y66R D112T G174P V180S",4
"lib2","SARS-CoV-2","AACCTACACGACCGTT",7,2.95,NA,NA,NA,NA,NA,NA,"stop","L131* A192T",2
"lib2","SARS-CoV-2","AACCTACCAAACGACT",4,34.86,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","K48G A67T Y91C D98S F134H",5
"lib2","SARS-CoV-2","AACCTACCGCGCTGTA",1,12.86,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S29K W106V G116N R136L",4
"lib2","SARS-CoV-2","AACCTACGCAGGACCT",7,52.51,10.82,-0.01,0.06,2.92,1.06,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","AACCTACTAAGAAAAA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","E10P S19M N24Q P54* G86M N157Y",6
"lib2","SARS-CoV-2","AACCTACTCCAATCCC",1,50.48,9.26,-1.58,0.09,2.77,1.08,0,">1 nonsynonymous","F126V G152W",2
"lib2","SARS-CoV-2","AACCTACTGATTAAAC",9,129.83,9.83,-1,0.07,2.14,1.09,0,">1 nonsynonymous","C49M L60M",2
"lib2","SARS-CoV-2","AACCTACTTCAGAAAT",10,95.2,10.86,0.02,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTACTTGCAACAG",23,151.66,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A18S W106T Y143N",3
"lib2","SARS-CoV-2","AACCTACTTTACTATA",2,33.58,10.57,-0.27,0.06,2.84,1.13,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","AACCTAGACCACTATG",2,20.08,9.47,-1.36,0.26,1.72,1,0.04,"1 nonsynonymous","D137F",1
"lib2","SARS-CoV-2","AACCTAGATTTATACA",8,148.72,10.8,-0.04,0.06,2.9,1.12,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","AACCTAGTAATGCCTA",3,20.9,9.72,-1.11,0.14,1.8,1.07,0.01,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","AACCTAGTACTTGCAC",6,16.59,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8E S41I N64Y D137H C150S",5
"lib2","SARS-CoV-2","AACCTAGTGATAATGA",5,44.24,9.57,-1.27,0.07,2.65,1.14,0,">1 nonsynonymous","T3P G51C K87V",3
"lib2","SARS-CoV-2","AACCTAGTTAAATTTG",11,136.04,10.7,-0.14,0.04,2.93,1.06,0,">1 nonsynonymous","A33S T201S",2
"lib2","SARS-CoV-2","AACCTATACAAAGTCC",12,156.02,10.88,0.04,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTATACCAAAATA",23,297.58,6,-4.84,1.41,1.5,1.3,0.03,">1 nonsynonymous","V32H K56V A105L F134W F160Y",5
"lib2","SARS-CoV-2","AACCTATACGCCAATT",3,35.44,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","P149S N157F Y178E V182W",4
"lib2","SARS-CoV-2","AACCTATAGTTTAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L38E Y91* V103E T148D V181E F185K",6
"lib2","SARS-CoV-2","AACCTATATGTAACTA",3,5.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A42I P82M K87E",3
"lib2","SARS-CoV-2","AACCTATATTCACAAT",7,2.79,NA,NA,NA,NA,NA,NA,"stop","P7A R16H V52S K56* G86W V153C",6
"lib2","SARS-CoV-2","AACCTATCCAACAACC",3,6.35,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L95G Y119P",2
"lib2","SARS-CoV-2","AACCTATCCCTAAAAT",1,71.25,6.05,-4.78,0.91,1.5,1.19,0.02,">1 nonsynonymous","A67D K87S",2
"lib2","SARS-CoV-2","AACCTATCCCTCATAT",1,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V I72M A89N K114L",4
"lib2","SARS-CoV-2","AACCTATCTCACACTT",5,94.48,8.68,-2.16,0.06,2.63,1.11,0,">1 nonsynonymous","I2S A42T K48T Y119M",4
"lib2","SARS-CoV-2","AACCTATGAGAAACCT",6,155.08,10.79,-0.04,0.04,2.95,1.04,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","AACCTATGATTTTGAA",4,30.12,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D98E L125D F167H",3
"lib2","SARS-CoV-2","AACCTATGCAGTTAAT",1,13.51,6,-4.84,2,3,1.09,0,">1 nonsynonymous","R27S A42S S69M K94M N130Y",5
"lib2","SARS-CoV-2","AACCTATGCCACTAAA",5,87.93,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","C31F Y66C G152F H189M",4
"lib2","SARS-CoV-2","AACCTATGTATAACAA",1,24.03,6.18,-4.66,1.15,1.5,1.16,0.05,">1 nonsynonymous","A89R F126L S147Y G152F F160G",5
"lib2","SARS-CoV-2","AACCTATGTCCCGAGT",4,121.54,10.35,-0.49,0.05,2.94,1.05,0,"1 nonsynonymous","K48Y",1
"lib2","SARS-CoV-2","AACCTATGTCGCTGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","V32S Y50T L57* G101R",4
"lib2","SARS-CoV-2","AACCTATTAACTCAGA",6,87.22,8.36,-2.48,0.1,2.78,1.06,0,">1 nonsynonymous","K128S I142G T201K",3
"lib2","SARS-CoV-2","AACCTATTACGGGCAA",2,11.58,7.27,-3.56,0.46,1.59,1.16,0.03,"1 nonsynonymous","I88G",1
"lib2","SARS-CoV-2","AACCTATTCAACATAC",1,18.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49P V77L K132F G174W",4
"lib2","SARS-CoV-2","AACCTATTTGACATAA",2,35.1,9.71,-1.13,0.12,2.18,1.02,0,">1 nonsynonymous","R27L Y91C L183I",3
"lib2","SARS-CoV-2","AACCTCAAATCTTACG",11,158.96,10.18,-0.65,0.05,2.64,1.04,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","AACCTCAACAAAAAGC",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V R25F S41D V103T",4
"lib2","SARS-CoV-2","AACCTCACCAGGTGCG",2,1.01,NA,NA,NA,NA,NA,NA,"stop","L60S I88Y F134L C150*",4
"lib2","SARS-CoV-2","AACCTCAGACGTATTC",8,124.21,10.75,-0.08,0.03,2.98,1.02,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","AACCTCAGATCAAAAT",2,33.18,10.12,-0.72,0.13,2.84,1.15,0.01,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","AACCTCAGGGGATGGC",5,7.03,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib2","SARS-CoV-2","AACCTCAGTACGAACG",11,79.83,10.42,-0.42,0.05,2.91,1.07,0,">1 nonsynonymous","L5T V37H A81S",3
"lib2","SARS-CoV-2","AACCTCATATATTGCT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","D68* T100H",2
"lib2","SARS-CoV-2","AACCTCATGCCTAAAG",17,273.04,7.35,-3.48,0.15,1.5,1.14,0.01,">1 nonsynonymous","V37Y G117R G166C",3
"lib2","SARS-CoV-2","AACCTCCAAACCGTAA",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L V181R",2
"lib2","SARS-CoV-2","AACCTCCAGTAATTTT",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q L38F D90I I104H V153F",5
"lib2","SARS-CoV-2","AACCTCCATCTCCACG",3,47.36,10.29,-0.54,0.03,2.95,1.05,0,">1 nonsynonymous","C31T A42R",2
"lib2","SARS-CoV-2","AACCTCCATGTCTGGC",7,166.05,10.86,0.03,0.04,2.92,1.1,0,">1 nonsynonymous","F62V L187S",2
"lib2","SARS-CoV-2","AACCTCCCCTCCAAAC",7,91.55,10.79,-0.04,0.04,2.98,1.05,0,">1 nonsynonymous","K87R V173L",2
"lib2","SARS-CoV-2","AACCTCCGACCAACAA",2,69.63,10.76,-0.07,0.07,2.96,1.05,0,"1 nonsynonymous","Y66L",1
"lib2","SARS-CoV-2","AACCTCCTTGCATTAA",7,74.74,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19K G83A N130G C150K",4
"lib2","SARS-CoV-2","AACCTCGATTGTACCT",2,8.78,8,-2.83,0.19,1.75,1.07,0.01,">1 nonsynonymous","N4R N107V T148C",3
"lib2","SARS-CoV-2","AACCTCGCCAAAGCTG",10,139.76,10.79,-0.04,0.08,2.79,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTCTAACCTAATT",4,74.18,11.17,0.33,0.03,2.99,1.02,0,">1 nonsynonymous","E10D S41R N171F",3
"lib2","SARS-CoV-2","AACCTCTACCCAGACA",1,7.24,9.08,-1.76,0.53,1.5,1.16,0.06,">1 nonsynonymous","T3V A22S Y39H P133Q E141H",5
"lib2","SARS-CoV-2","AACCTCTACTATGAGT",5,9.6,6,-4.84,1.7,3,1.47,0.02,">1 nonsynonymous","A81T V103R E135L P169I",4
"lib2","SARS-CoV-2","AACCTCTTAGTAGTCC",1,5.67,9.46,-1.37,0.24,2.72,1.15,0.01,">1 nonsynonymous","N118Y E141G",2
"lib2","SARS-CoV-2","AACCTGAAAAAGCAAC",1,58.15,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","AACCTGAAAATTTCGT",5,36.55,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","F12M S45R P161D",3
"lib2","SARS-CoV-2","AACCTGAACACCCAAA",2,26.82,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N30R L60K P96V Y175L",4
"lib2","SARS-CoV-2","AACCTGAACAGGGTGA",3,45.84,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y50V L162G L188H",3
"lib2","SARS-CoV-2","AACCTGAAGGACGTTA",8,78.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10D V65F Y91E",3
"lib2","SARS-CoV-2","AACCTGAATAATCGTG",5,16.49,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T55V I72E A81S",3
"lib2","SARS-CoV-2","AACCTGAATACCCGGC",2,28.33,10.57,-0.26,0.08,2.77,1.22,0,">1 nonsynonymous","S29K C61I T201V",3
"lib2","SARS-CoV-2","AACCTGAATTATAGGC",10,55.9,8.61,-2.23,0.13,1.82,1.07,0.01,">1 nonsynonymous","Y91T T100H I142L",3
"lib2","SARS-CoV-2","AACCTGACGTAGTCTA",8,4.13,NA,NA,NA,NA,NA,NA,"stop","S45I Y50P D97* C150T",4
"lib2","SARS-CoV-2","AACCTGACTCCAAATC",1,13.46,10.91,0.07,0.13,2.93,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACCTGAGCTATCAAG",4,31.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8Q I28T N118T Q144Y",4
"lib2","SARS-CoV-2","AACCTGAGTTATCATA",2,18.56,7.37,-3.47,0.33,1.5,1.17,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","AACCTGATATGGGAAT",1,26.91,10.19,-0.64,0.1,2.4,1.06,0.01,"1 nonsynonymous","V52D",1
"lib2","SARS-CoV-2","AACCTGCAGACACGCT",2,61.07,10.75,-0.09,0.05,2.84,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","AACCTGCATAACAAAA",13,28.97,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","T15Q G51S G86W D98Q",4
"lib2","SARS-CoV-2","AACCTGCCGCGTGGAA",8,90.4,6.24,-4.59,0.69,1.5,1.19,0.02,">1 nonsynonymous","S41R D90F N107T",3
"lib2","SARS-CoV-2","AACCTGCCTGTGCCAT",3,1.99,NA,NA,NA,NA,NA,NA,"stop","V71L N92* N107G G117N F156T",5
"lib2","SARS-CoV-2","AACCTGCCTTAACAGG",10,86.49,10.08,-0.75,0.04,2.82,1.03,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","AACCTGCTCATCCCAT",8,94.55,10.83,-0.01,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTGCTCTACAAAG",11,90.42,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4L L60C G86S V103S",4
"lib2","SARS-CoV-2","AACCTGCTTCCAAACG",12,157.1,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89V A105C N120I A192R",4
"lib2","SARS-CoV-2","AACCTGGAAGAATAAT",3,11.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8R K87A N92Q",3
"lib2","SARS-CoV-2","AACCTGGATTATAATC",6,80.19,10.39,-0.45,0.04,3,1.01,0,">1 nonsynonymous","S36L K87N",2
"lib2","SARS-CoV-2","AACCTGGCAGGGAATC",6,32.41,8.96,-1.88,0.11,2.14,1.05,0.01,">1 nonsynonymous","K26L S43V P133Q G174L",4
"lib2","SARS-CoV-2","AACCTGGCATATTCCG",3,49.98,10.33,-0.51,0.06,3,1.02,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","AACCTGGCCCCCTTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","S69V N110T L122D V182* P191N",5
"lib2","SARS-CoV-2","AACCTGGGACAATATT",6,74.87,10.69,-0.15,0.03,2.93,1.08,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AACCTGGTTCGACATG",3,34.85,10.76,-0.08,0.04,3,1.01,0,"1 nonsynonymous","K114H",1
"lib2","SARS-CoV-2","AACCTGTAAGCCTGAA",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23F N120T G166C",3
"lib2","SARS-CoV-2","AACCTGTACGATGATA",7,108.7,10.52,-0.31,0.04,2.97,1.03,0,">1 nonsynonymous","T63L K132G",2
"lib2","SARS-CoV-2","AACCTGTCCATAAGAT",2,5.69,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C61M D68R L122S R127S",4
"lib2","SARS-CoV-2","AACCTGTCGGTTGACG",4,60.95,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23V S45P V115L N130L P149K",5
"lib2","SARS-CoV-2","AACCTGTGAAAAACCC",3,23.79,10.91,0.07,0.1,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTGTGCTGACTGG",7,58.09,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K94D N110R Y178N",3
"lib2","SARS-CoV-2","AACCTTAAACTAAACC",18,240.49,10.63,-0.21,0.02,2.96,1.03,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","AACCTTAAATGCCAGA",5,4.27,NA,NA,NA,NA,NA,NA,"stop","F44* F156Y",2
"lib2","SARS-CoV-2","AACCTTAAATTCCGAC",8,59.49,10.65,-0.18,0.05,2.88,1.15,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","AACCTTAACAACCGGT",15,11.25,NA,NA,NA,NA,NA,NA,"stop","R16* C61R Y91E G101L Y178N K198G",6
"lib2","SARS-CoV-2","AACCTTAACCCGGAAG",2,66.88,10.03,-0.81,0.08,2.51,1.02,0,">1 nonsynonymous","T15Y E186H",2
"lib2","SARS-CoV-2","AACCTTAACGATTTAC",5,104.68,10.34,-0.5,0.04,2.93,1.03,0,">1 nonsynonymous","T3A F44V T140N",3
"lib2","SARS-CoV-2","AACCTTAATAAGGTCT",1,10.76,10.08,-0.76,0.33,2.16,1.23,0.02,">1 nonsynonymous","E76A N151T P197T",3
"lib2","SARS-CoV-2","AACCTTAATACACTAA",6,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A N64D P133V",3
"lib2","SARS-CoV-2","AACCTTAATACTTACA",2,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K I88Y T170I Y175W L183T",5
"lib2","SARS-CoV-2","AACCTTACAAACAATC",9,12.67,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","N13V A22L F70H K94L G117P",5
"lib2","SARS-CoV-2","AACCTTACAGCTGATA",4,120.32,10.15,-0.69,0.04,3,1,0,"1 nonsynonymous","F126V",1
"lib2","SARS-CoV-2","AACCTTACATTCAGTT",11,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R D34P E135V P149F",4
"lib2","SARS-CoV-2","AACCTTACCAATTCCG",1,11.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A105K S129F T201R",3
"lib2","SARS-CoV-2","AACCTTACGAAAGTAA",11,69.64,10.32,-0.51,0.09,2.28,1.02,0,">1 nonsynonymous","T46S E76A",2
"lib2","SARS-CoV-2","AACCTTAGAGATTTGC",13,116.36,8.63,-2.2,0.13,1.89,1.1,0.01,">1 nonsynonymous","S19Q N58R R78Y T85S",4
"lib2","SARS-CoV-2","AACCTTAGATACTGAA",4,52.74,8.07,-2.77,0.15,2.2,1.06,0.01,">1 nonsynonymous","T63V S113M T140N",3
"lib2","SARS-CoV-2","AACCTTAGGGATCAAC",1,23.89,7.5,-3.34,0.24,1.69,1.08,0.02,">1 nonsynonymous","N107P L162R",2
"lib2","SARS-CoV-2","AACCTTAGGTCTGGAT",1,17.57,6.23,-4.61,0.5,3,1.02,0.01,">1 nonsynonymous","A105E Y143S",2
"lib2","SARS-CoV-2","AACCTTATAATACAAA",2,108.64,10.74,-0.09,0.04,2.97,1.05,0,"1 nonsynonymous","D59N",1
"lib2","SARS-CoV-2","AACCTTATACCTTACC",6,92.83,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F8P K56H V77G Y143H",4
"lib2","SARS-CoV-2","AACCTTATCGAATATT",7,62.98,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D34C I88K G117T V153G T201K",5
"lib2","SARS-CoV-2","AACCTTATGGCGACAA",15,171.43,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44C Y123L F167C",3
"lib2","SARS-CoV-2","AACCTTCACAATTTGC",1,12.95,9.65,-1.19,0.16,1.84,1.18,0.01,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","AACCTTCAGGAAACCC",5,31.23,8.2,-2.63,0.24,1.83,1.05,0.02,">1 nonsynonymous","A67I S113R",2
"lib2","SARS-CoV-2","AACCTTCATAACCAAT",4,41.34,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I28A T46R E141I G152Y",4
"lib2","SARS-CoV-2","AACCTTCCAATGCATA",4,36.68,10.81,-0.02,0.09,2.83,1.16,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","AACCTTCCGAACCCTT",3,19.9,6.3,-4.53,0.75,1.57,1.17,0.03,">1 nonsynonymous","A33Q R127D F185H",3
"lib2","SARS-CoV-2","AACCTTCCTCTGCGAT",14,275.82,9.73,-1.11,0.02,2.87,1.08,0,">1 nonsynonymous","N107E Q163K",2
"lib2","SARS-CoV-2","AACCTTCGTAGCAATA",7,33.8,10.83,0,0.06,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AACCTTCTGAAATGTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N V103Q K132N L183Q",4
"lib2","SARS-CoV-2","AACCTTGAAAGAACTA",3,89.2,9.1,-1.73,0.12,2.46,1.1,0.01,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","AACCTTGAAGGTACAA",1,46.53,9.33,-1.5,0.08,2.8,1.12,0,">1 nonsynonymous","K132H T170L",2
"lib2","SARS-CoV-2","AACCTTGATACACCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y D59S G86Q V103P L162H",5
"lib2","SARS-CoV-2","AACCTTGCAGTATTCC",6,7.84,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N1P L183S",2
"lib2","SARS-CoV-2","AACCTTGCCTAAACTG",7,24.01,6,-4.84,1.59,3,1.09,0,">1 nonsynonymous","G86C L131A",2
"lib2","SARS-CoV-2","AACCTTGGCTATACGC",6,45.21,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91L A105H G172K L187M K199S",5
"lib2","SARS-CoV-2","AACCTTGTACACCATA",7,19.29,7.99,-2.85,0.45,1.5,1,0.08,">1 nonsynonymous","N92H V103K C150I",3
"lib2","SARS-CoV-2","AACCTTGTTAAGTACG",9,96.72,10.88,0.04,0.05,3,1.02,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","AACCTTTACGGTATAA",6,26.61,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","R27Y A81P A89Y C150T T201S",5
"lib2","SARS-CoV-2","AACCTTTCTACTCCTA",2,49.34,10.85,0.01,0.07,2.94,1.08,0,"1 nonsynonymous","F160S",1
"lib2","SARS-CoV-2","AACCTTTGAGGTATCT",6,25.34,9.91,-0.93,0.14,2.26,1.08,0.01,">1 nonsynonymous","S36N R136E T201S",3
"lib2","SARS-CoV-2","AACCTTTGTAACTCTG",2,38.14,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D90G F167Q",2
"lib2","SARS-CoV-2","AACCTTTTGATCTCTC",4,72.7,7.57,-3.27,0.3,1.5,1.16,0.02,">1 nonsynonymous","S19K L57T F160R",3
"lib2","SARS-CoV-2","AACGAAAAAAATGGGA",4,40.26,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S19G S29R N64W D90S F99D",5
"lib2","SARS-CoV-2","AACGAAAAAACTTGCA",1,0.75,NA,NA,NA,NA,NA,NA,"stop","F12C L60R E154*",3
"lib2","SARS-CoV-2","AACGAAAACAGTTTGT",2,24.5,10.22,-0.61,0.07,2.88,1.06,0,">1 nonsynonymous","D34G F160S P197V",3
"lib2","SARS-CoV-2","AACGAAAAGAAGATAT",2,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A Y35P A42N V71R V103K",5
"lib2","SARS-CoV-2","AACGAAAATGAAAATA",1,35.84,10.5,-0.34,0.08,2.95,1.04,0,">1 nonsynonymous","G83N E141T",2
"lib2","SARS-CoV-2","AACGAAAATGACAGTA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S A42I L95N S139I G146F C158V K198E",7
"lib2","SARS-CoV-2","AACGAAACAAAGAAGA",15,219.77,10.52,-0.32,0.04,2.9,1.04,0,">1 nonsynonymous","N40C V173L",2
"lib2","SARS-CoV-2","AACGAAACAAGCCTAA",10,107.85,9.93,-0.9,0.07,2.48,1.04,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","AACGAAACGATTACGG",1,0.37,NA,NA,NA,NA,NA,NA,"stop","G116T L125M G152*",3
"lib2","SARS-CoV-2","AACGAAACTAAATGGT",7,46.52,10.26,-0.57,0.05,2.76,1.04,0,">1 nonsynonymous","Y39L V52Y K132W",3
"lib2","SARS-CoV-2","AACGAAACTAGAAGCA",5,1.03,NA,NA,NA,NA,NA,NA,"stop","G9V Y39R D97G Y121* P133R",5
"lib2","SARS-CoV-2","AACGAAATAAAATCAA",4,174.53,10.72,-0.12,0.05,2.9,1.07,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","AACGAAATAAGGGCAA",2,43.04,10.93,0.09,0.06,2.9,1.11,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","AACGAAATAGCTACGA",5,68.08,9.39,-1.45,0.04,2.93,1.09,0,">1 nonsynonymous","K26A G146T",2
"lib2","SARS-CoV-2","AACGAAATATCACTTG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G F62D D98A",3
"lib2","SARS-CoV-2","AACGAAATCCCAAACA",14,90.66,6.3,-4.54,0.59,1.5,1.17,0.02,">1 nonsynonymous","K87S A105K",2
"lib2","SARS-CoV-2","AACGAAATGAAAAATA",3,23.5,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","E10G C49N",2
"lib2","SARS-CoV-2","AACGAAATTAATCCAA",2,9.01,9.48,-1.35,0.14,3,1.04,0.01,">1 nonsynonymous","C6S G152M",2
"lib2","SARS-CoV-2","AACGAAATTATAATCC",2,22.5,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6N K48G F99I I142S L183I",5
"lib2","SARS-CoV-2","AACGAACAACTGCTAC",2,21.33,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V11M D112Q G174F T201Y",4
"lib2","SARS-CoV-2","AACGAACATACAGGAT",6,6.41,7.24,-3.59,2,3,1.06,0,">1 nonsynonymous","C61R D137T V173H",3
"lib2","SARS-CoV-2","AACGAACCAACGGTAA",2,14.91,10.53,-0.31,0.13,2.66,1.29,0.01,"1 nonsynonymous","N120G",1
"lib2","SARS-CoV-2","AACGAACCTACTCCAT",5,41.5,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L60E S69D I88M F156C V173S",5
"lib2","SARS-CoV-2","AACGAACCTTGGACGC",4,128.98,9.73,-1.11,0.03,2.89,1.07,0,">1 nonsynonymous","D59V F156S",2
"lib2","SARS-CoV-2","AACGAACGGGGAATTT",16,72.73,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","C6V T100S N107A S113K",4
"lib2","SARS-CoV-2","AACGAACGTACCCACT",8,98.47,10.74,-0.1,0.03,2.92,1.09,0,">1 nonsynonymous","K56H T63R",2
"lib2","SARS-CoV-2","AACGAACTACACTGAC",5,0,NA,NA,NA,NA,NA,NA,"stop","K48S P96S I104R E186*",4
"lib2","SARS-CoV-2","AACGAACTCCGTACTT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142K",1
"lib2","SARS-CoV-2","AACGAACTGGGAAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R R136W V181R",3
"lib2","SARS-CoV-2","AACGAACTGTAAGAAC",1,24.15,10.75,-0.09,0.08,2.95,1.06,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","AACGAAGAACACTATG",5,92.59,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y91L S113W Y119S Y159C",4
"lib2","SARS-CoV-2","AACGAAGAATATTCAA",15,131.15,9,-1.84,0.13,1.6,1.11,0.01,"1 nonsynonymous","D137T",1
"lib2","SARS-CoV-2","AACGAAGAATGACGAT",4,44.56,10.17,-0.67,0.06,2.81,1,0,">1 nonsynonymous","G9V G152Y T201K",3
"lib2","SARS-CoV-2","AACGAAGACGGCGAAT",4,25.2,10.46,-0.38,0.08,2.79,1,0,">1 nonsynonymous","S43L D90H P149Q",3
"lib2","SARS-CoV-2","AACGAAGCTAATAGCT",17,212.95,10.66,-0.17,0.03,2.94,1.04,0,">1 nonsynonymous","T3R T148L V153S",3
"lib2","SARS-CoV-2","AACGAAGGACGATATG",4,2.23,NA,NA,NA,NA,NA,NA,"stop","F99L T100*",2
"lib2","SARS-CoV-2","AACGAAGTAAATCTTT",3,17.93,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V20W I28E G83H F160K",4
"lib2","SARS-CoV-2","AACGAAGTATATAAAG",4,41.51,10.43,-0.41,0.06,2.89,1.08,0,">1 nonsynonymous","K56L D90N Q144S",3
"lib2","SARS-CoV-2","AACGAAGTCTCCAATT",3,42.61,6,-4.84,1.83,1.5,1.12,0.01,">1 nonsynonymous","G9L D68E K87G",3
"lib2","SARS-CoV-2","AACGAAGTTGGACATT",27,160.3,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F8E P133A I142K N157R",4
"lib2","SARS-CoV-2","AACGAAGTTTCAGCTG",2,5.02,10.53,-0.3,0.17,2.57,1.46,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACGAAGTTTGAGTCG",2,16.31,7.28,-3.56,0.17,2.38,1.07,0.01,"1 nonsynonymous","C158E",1
"lib2","SARS-CoV-2","AACGAATAAACACGCC",8,16.24,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12C Y35V K56L C61Q G86R S147K Q176L E186I",8
"lib2","SARS-CoV-2","AACGAATAATGAGTTA",1,3.3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACGAATCAAGGCACA",7,1.27,NA,NA,NA,NA,NA,NA,"stop","V37W G83* A105F S184R",4
"lib2","SARS-CoV-2","AACGAATCACACACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","T46I E141*",2
"lib2","SARS-CoV-2","AACGAATCCAGAGAAG",1,7.3,6,-4.84,2,3,1.03,0,">1 nonsynonymous","W23P L38V G51F C61Y L95W A190S",6
"lib2","SARS-CoV-2","AACGAATCCTTTGACA",1,7.34,10.8,-0.03,0.12,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGAATCTACTGCTA",2,5.34,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","F8S Y91H K132A S164G",4
"lib2","SARS-CoV-2","AACGAATGAATAAGGA",5,209.62,10.09,-0.74,0.05,2.97,1.05,0,">1 nonsynonymous","C6T K87I T201P",3
"lib2","SARS-CoV-2","AACGAATGCACCACTC",19,205.88,8.33,-2.51,0.09,2.09,1.08,0,">1 nonsynonymous","G83N S108I T201P",3
"lib2","SARS-CoV-2","AACGAATGGAGCTAGG",1,5.99,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S45T L57S K94T",3
"lib2","SARS-CoV-2","AACGAATGTAGTCGGT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y E76G A81S",3
"lib2","SARS-CoV-2","AACGAATTAACCACCA",3,40.63,10.79,-0.04,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGAATTAACCTCAT",4,117.49,10.67,-0.16,0.03,2.94,1.05,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","AACGAATTCTCAAGAG",3,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48E A89R",2
"lib2","SARS-CoV-2","AACGACAAAAAAGATA",2,86.16,10,-0.83,0.08,2.41,1.04,0,">1 nonsynonymous","I104S N151S",2
"lib2","SARS-CoV-2","AACGACAAACTAGAAT",10,290.44,10.64,-0.2,0.02,2.95,1.05,0,">1 nonsynonymous","I80L K198G",2
"lib2","SARS-CoV-2","AACGACAACTCCAGAA",5,173.23,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37D N118K N157Y S200L",4
"lib2","SARS-CoV-2","AACGACAATACATTGG",1,24.08,10.51,-0.33,0.05,2.99,1,0,">1 nonsynonymous","L5Y N30M N171T",3
"lib2","SARS-CoV-2","AACGACAATGAAAAGT",5,12.51,9.97,-0.87,0.17,2.21,1.13,0.01,">1 nonsynonymous","I28T L60P",2
"lib2","SARS-CoV-2","AACGACAATGATATTC",2,134.94,8.37,-2.46,0.11,2.72,1.03,0,"1 nonsynonymous","Q176G",1
"lib2","SARS-CoV-2","AACGACAATTTTGTAT",8,60.94,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G86S N107S Q144Y G152I",4
"lib2","SARS-CoV-2","AACGACACAACCTTAG",6,57.87,10.65,-0.18,0.05,2.87,1.07,0,">1 nonsynonymous","C61S H189Q T201L",3
"lib2","SARS-CoV-2","AACGACACAAGTAAAG",3,11.33,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","W23R K56T Q84I N110L",4
"lib2","SARS-CoV-2","AACGACACCCGAAGGT",13,125.02,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C31L P54R N107F",3
"lib2","SARS-CoV-2","AACGACACGTATCATA",6,81.4,10.6,-0.23,0.08,2.78,1.15,0,">1 nonsynonymous","S147Q V153F",2
"lib2","SARS-CoV-2","AACGACACTATAGATA",3,47.96,6.22,-4.62,0.71,1.5,1.15,0.02,">1 nonsynonymous","F47I V65D",2
"lib2","SARS-CoV-2","AACGACACTGGCACAT",9,77.82,6,-4.84,2,3,1.27,0,">1 nonsynonymous","L5M D34G G51P P149Q F185L",5
"lib2","SARS-CoV-2","AACGACAGTTCATATG",11,53.51,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L95N Q144V N151M C158S",4
"lib2","SARS-CoV-2","AACGACCAAATACTGA",2,19.22,10.83,-0.01,0.08,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGACCAAGCATATT",7,213.87,9.83,-1,0.07,2.33,1.04,0,">1 nonsynonymous","E10H N64C Y91L",3
"lib2","SARS-CoV-2","AACGACCACTAAGTGG",1,53.68,10.91,0.07,0.06,2.98,1.02,0,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","AACGACCATAACTAAA",1,12.03,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","N1M C150N F167L",3
"lib2","SARS-CoV-2","AACGACCCTAATAAAA",6,36.99,8.04,-2.79,0.16,1.61,1.14,0.01,">1 nonsynonymous","I2R T55Y W106Y Q176H A190H",5
"lib2","SARS-CoV-2","AACGACCGTCGCACGA",4,50.77,8.96,-1.87,0.06,2.64,1.07,0,">1 nonsynonymous","L5R S45G K114P",3
"lib2","SARS-CoV-2","AACGACCTAGTTCGCA",5,147.22,9.55,-1.29,0.07,2.28,1.04,0,">1 nonsynonymous","V103T G174S S184H",3
"lib2","SARS-CoV-2","AACGACCTGCCCGTAA",6,139.33,9.97,-0.86,0.09,2.56,1.07,0,">1 nonsynonymous","C31R Q163C",2
"lib2","SARS-CoV-2","AACGACCTGTATACAG",7,3.15,NA,NA,NA,NA,NA,NA,"stop","P7V F12M T100P S139* N171E",5
"lib2","SARS-CoV-2","AACGACGCGAATAAGC",5,32.41,7.52,-3.31,0.36,1.58,1.16,0.04,">1 nonsynonymous","T100V W106R L122G A145N",4
"lib2","SARS-CoV-2","AACGACGTATTCATAT",4,58.4,9.61,-1.23,0.09,2.41,1.06,0,">1 nonsynonymous","P7V R16T A89V V115M L188C",5
"lib2","SARS-CoV-2","AACGACTAAAGTTAAT",8,1.24,NA,NA,NA,NA,NA,NA,"stop","P133S P149* K198T",3
"lib2","SARS-CoV-2","AACGACTAAATATCAG",2,7.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6M V20T Y35L F160L",4
"lib2","SARS-CoV-2","AACGACTCACAAACTT",10,71.34,10.74,-0.1,0.03,2.95,1.07,0,">1 nonsynonymous","S113A F160S",2
"lib2","SARS-CoV-2","AACGACTGCCCATTAA",5,61.19,6.51,-4.32,0.38,1.5,1.15,0.02,">1 nonsynonymous","A105Q T170Y A190S",3
"lib2","SARS-CoV-2","AACGACTTATCCAAAT",3,33.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37L P161L",2
"lib2","SARS-CoV-2","AACGACTTGCAAAAAA",5,65.56,9.7,-1.14,0.08,1.98,1.09,0,">1 nonsynonymous","S36A G51Y",2
"lib2","SARS-CoV-2","AACGACTTGCCTTTTG",11,2.01,NA,NA,NA,NA,NA,NA,"stop","Y91* F99L T148W",3
"lib2","SARS-CoV-2","AACGAGAAAAATTAAC",17,176.63,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G51V Q79K G101F F160V",4
"lib2","SARS-CoV-2","AACGAGAAATTAAAAT",12,118.91,8.76,-2.08,0.07,2.42,1.11,0,">1 nonsynonymous","D90S I142N",2
"lib2","SARS-CoV-2","AACGAGAATCGCATAT",2,8.69,9.19,-1.65,0.26,1.5,1,0.03,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","AACGAGACCTAAGCTA",5,103.74,10.26,-0.57,0.03,2.98,1.02,0,">1 nonsynonymous","G51H G166N",2
"lib2","SARS-CoV-2","AACGAGACCTCCTTTA",7,45.21,9.41,-1.43,0.18,1.55,1.07,0.02,"1 nonsynonymous","Y50L",1
"lib2","SARS-CoV-2","AACGAGACGGACTATA",5,10.44,10.24,-0.6,0.2,2.79,1,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AACGAGAGATTCGCAG",4,23.85,10.26,-0.58,0.1,2.81,1.1,0,">1 nonsynonymous","N130F S139Q",2
"lib2","SARS-CoV-2","AACGAGAGCTCACTGT",12,117.18,10.81,-0.03,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGAGATAATATGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R P54T L95R W106A E141V G146A",6
"lib2","SARS-CoV-2","AACGAGATAATTAGAC",7,190.85,9.87,-0.96,0.03,2.17,1.04,0,"1 nonsynonymous","I72A",1
"lib2","SARS-CoV-2","AACGAGCAGTAGTGAT",3,15.99,7.62,-3.22,0.42,1.5,1.09,0.06,">1 nonsynonymous","F44H T55L T170R Q176M",4
"lib2","SARS-CoV-2","AACGAGCATCCGTTGA",12,150.32,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12T S36H Y93S",3
"lib2","SARS-CoV-2","AACGAGCCAACTATTA",16,146.28,10.63,-0.2,0.04,2.94,1.05,0,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","AACGAGCCTAAGTGGA",6,1.62,NA,NA,NA,NA,NA,NA,"stop","F44R V103K N151F G172K P197*",5
"lib2","SARS-CoV-2","AACGAGCCTACGCACG",9,219.18,8.9,-1.94,0.09,1.76,1.1,0,">1 nonsynonymous","S36W G51L T170S",3
"lib2","SARS-CoV-2","AACGAGCTTTGGCCTT",3,12.76,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","F62A T85E K128T",3
"lib2","SARS-CoV-2","AACGAGGACAATTTAG",2,18.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V65L V77N D137V",3
"lib2","SARS-CoV-2","AACGAGGATTAATGTA",1,20.69,6,-4.84,2,3,1.05,0,">1 nonsynonymous","T46R D112V N151V S164I",4
"lib2","SARS-CoV-2","AACGAGGCAAATGATT",4,23.28,9.56,-1.28,0.21,1.57,1.07,0.02,">1 nonsynonymous","C49Y L95I",2
"lib2","SARS-CoV-2","AACGAGGCAGAATGTA",2,35.59,10.24,-0.59,0.05,2.98,1.02,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","AACGAGGCAGTGAAAC",2,14.33,10.11,-0.73,0.1,2.56,1,0.01,">1 nonsynonymous","D90F P191I S200V",3
"lib2","SARS-CoV-2","AACGAGGCTACGTGCG",3,25.04,10.82,-0.01,0.02,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGAGGCTAGCAGAA",1,13.45,10.08,-0.76,0.1,2.47,1.15,0,">1 nonsynonymous","D90Q R136S",2
"lib2","SARS-CoV-2","AACGAGGGCGAACACC",5,64.13,9.61,-1.22,0.03,2.91,1.09,0,">1 nonsynonymous","Y119R V173G",2
"lib2","SARS-CoV-2","AACGAGGGCTCTCGAC",3,25.72,9.76,-1.08,0.05,2.99,1,0,"1 nonsynonymous","G74S",1
"lib2","SARS-CoV-2","AACGAGGTGCCTCTCC",11,155.13,10.58,-0.26,0.06,2.9,1.07,0,">1 nonsynonymous","C61I V115E",2
"lib2","SARS-CoV-2","AACGAGGTTAAAAGAA",10,37.97,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A14T K87S Y123C V182A",4
"lib2","SARS-CoV-2","AACGAGGTTGAACCGA",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V L57V V115T",3
"lib2","SARS-CoV-2","AACGAGTACCGAAAAG",5,203.32,9.34,-1.5,0.03,2.92,1.1,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","AACGAGTACGACGGGG",1,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","AACGAGTCACTGCTTA",9,87.5,10.65,-0.19,0.03,2.93,1.07,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","AACGAGTCTACAAAAC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S N92T V103T Y123V P133L",5
"lib2","SARS-CoV-2","AACGAGTGTAGGCCTA",4,48.76,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A14L S69F Y143N",3
"lib2","SARS-CoV-2","AACGAGTGTATTACGT",2,24.06,6,-4.84,2,1.5,1.14,0.02,"1 nonsynonymous","F70T",1
"lib2","SARS-CoV-2","AACGATAAGCTGCCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib2","SARS-CoV-2","AACGATAATAGATTTT",6,22.11,8.4,-2.44,0.4,1.5,1,0.05,">1 nonsynonymous","R25V H189Q",2
"lib2","SARS-CoV-2","AACGATACCCCCGTTT",1,0.58,NA,NA,NA,NA,NA,NA,"stop","F126L L131*",2
"lib2","SARS-CoV-2","AACGATACCTGCTGAT",10,36.64,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C6T T15N W23M T85A N107K",5
"lib2","SARS-CoV-2","AACGATAGGACACAAA",16,33.47,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","N13H S19T A42M W106V R124A",5
"lib2","SARS-CoV-2","AACGATATATTTTAAT",6,25.61,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4S A33Q A42W L60M A105L",5
"lib2","SARS-CoV-2","AACGATATCAGGGTAT",9,126.86,10.85,0.02,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGATCAAGATCAAT",7,122.98,10.83,-0.01,0.05,2.9,1.13,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","AACGATCACCCCGAAT",12,38.51,6.25,-4.58,0.69,1.5,1.13,0.02,"1 nonsynonymous","V103D",1
"lib2","SARS-CoV-2","AACGATCATAAAATCA",1,5.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","AACGATCATTGTTCAC",6,99.08,9.73,-1.1,0.06,2.46,1.1,0,">1 nonsynonymous","V11L F134D P149K",3
"lib2","SARS-CoV-2","AACGATCCAACCCTTC",3,24.18,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y21S S29T P82K D98N",4
"lib2","SARS-CoV-2","AACGATCCTGTAATAC",6,38.98,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","C49R",1
"lib2","SARS-CoV-2","AACGATCTATGACCAA",4,84.31,6,-4.84,2,1.5,1.37,0.04,">1 nonsynonymous","C158F G172R",2
"lib2","SARS-CoV-2","AACGATGAAAGTGCTG",14,185.44,9.31,-1.53,0.08,1.84,1.07,0,"1 nonsynonymous","S69E",1
"lib2","SARS-CoV-2","AACGATGAACCCCACT",2,29.11,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","F8Q S43L K48N A67S D90C L125R S184F",7
"lib2","SARS-CoV-2","AACGATGAAGCTCACC",1,2.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199Q",1
"lib2","SARS-CoV-2","AACGATGAATGTTTAT",4,48.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S I72W V103I",3
"lib2","SARS-CoV-2","AACGATGATAAGGATA",5,74.53,8.92,-1.91,0.07,2.87,1.11,0,">1 nonsynonymous","L60S G166R",2
"lib2","SARS-CoV-2","AACGATGCAGACAAAC",11,192.96,10.09,-0.75,0.06,2.68,1.01,0,"1 nonsynonymous","S19T",1
"lib2","SARS-CoV-2","AACGATGGCCGGACAG",1,6.44,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15P N30V S45F F126N",4
"lib2","SARS-CoV-2","AACGATGGCGACCCTA",11,101.36,9.28,-1.56,0.08,2.37,1.07,0,">1 nonsynonymous","T55D N64D D75E G83F D98E K132S G174S",7
"lib2","SARS-CoV-2","AACGATGGGTAAGTCC",3,41.06,6,-4.84,2,3,1.05,0,">1 nonsynonymous","L60V I88R N107S P149L Q176K",5
"lib2","SARS-CoV-2","AACGATTAACACTGTA",4,56.63,10.17,-0.66,0.07,2.71,1.08,0,">1 nonsynonymous","A18T Y39G",2
"lib2","SARS-CoV-2","AACGATTAGCACAGGG",18,85.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V103S D112K A145E P149Q",4
"lib2","SARS-CoV-2","AACGATTATGCTCGAA",3,5.74,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","L5M I28F V103M D112V C150S",5
"lib2","SARS-CoV-2","AACGATTATTGTACTT",9,133.85,10.81,-0.02,0.03,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGATTCAGAATTAG",3,67.23,10,-0.84,0.09,2.24,1.13,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","AACGATTGAAAAAGGA",8,89.82,10.67,-0.17,0.02,2.98,1.04,0,">1 nonsynonymous","F12I A42M N120E",3
"lib2","SARS-CoV-2","AACGATTTAAAATTTA",18,202.02,10.81,-0.03,0.05,2.87,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGATTTACACGACA",9,124.65,9.41,-1.43,0.04,2.99,1.03,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","AACGATTTTTAAACAG",2,6.94,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","N92T G101H N130W V181L",4
"lib2","SARS-CoV-2","AACGCAAACCTTACAC",8,123.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2M V77L N118G Y175T",4
"lib2","SARS-CoV-2","AACGCAAACTGGAGAA",1,12.1,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","R16Y Y93G Y143K",3
"lib2","SARS-CoV-2","AACGCAAAGCAAACAA",1,15.85,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41A C61M G101Y Y119K R127S",5
"lib2","SARS-CoV-2","AACGCAAATCACTGTA",2,30.84,6,-4.84,1.83,1.5,1.17,0.01,">1 nonsynonymous","A18E S43I E76S D90L",4
"lib2","SARS-CoV-2","AACGCAAATTCTTTGA",8,84.87,10.93,0.09,0.06,2.89,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGCAACCTCAAACA",11,34.92,6,-4.84,1.99,3,1.2,0.01,">1 nonsynonymous","C61Y P82W",2
"lib2","SARS-CoV-2","AACGCAACGACGCTTG",1,37.5,10.19,-0.65,0.07,2.53,1.04,0,">1 nonsynonymous","F62N D90L",2
"lib2","SARS-CoV-2","AACGCAACTATATTAT",4,60.65,10.67,-0.17,0.04,2.95,1.05,0,">1 nonsynonymous","A42F Y66F",2
"lib2","SARS-CoV-2","AACGCAAGCCTCAGCA",3,110.31,9.5,-1.33,0.05,2.97,1.05,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","AACGCAATAAAAATAA",10,398.4,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F44R C61H Y143N C158S L188D",5
"lib2","SARS-CoV-2","AACGCAATAGACCTAA",1,91.09,8.25,-2.58,0.14,2.26,1.13,0.01,">1 nonsynonymous","I80V N118H G174C",3
"lib2","SARS-CoV-2","AACGCAATATCCGCAA",14,3.76,NA,NA,NA,NA,NA,NA,"stop","F8M D34* L60C",3
"lib2","SARS-CoV-2","AACGCAATCACACAGG",6,1.62,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib2","SARS-CoV-2","AACGCAATCATCGACG",6,1.99,NA,NA,NA,NA,NA,NA,"stop","V153*",1
"lib2","SARS-CoV-2","AACGCAATCCTATGTA",6,62.66,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","R127T E154W",2
"lib2","SARS-CoV-2","AACGCAATCTTTAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6S A14* F44N V65A Q84V",5
"lib2","SARS-CoV-2","AACGCAATGAAGAAAT",4,24.28,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","K48N G146L L162N A192E",4
"lib2","SARS-CoV-2","AACGCAATGGGTCGGA",14,1.05,NA,NA,NA,NA,NA,NA,"stop","S45* P149G V194I",3
"lib2","SARS-CoV-2","AACGCACATTACACAT",6,60.01,8.64,-2.19,0.09,2.85,1.08,0,">1 nonsynonymous","S45K T170L",2
"lib2","SARS-CoV-2","AACGCACCCGAACCCC",5,60.5,10.75,-0.09,0.03,2.93,1.07,0,"1 nonsynonymous","N58G",1
"lib2","SARS-CoV-2","AACGCACGTCTTCGTT",6,81,10.59,-0.25,0.04,2.93,1.09,0,">1 nonsynonymous","A33L N40K",2
"lib2","SARS-CoV-2","AACGCACTATTAAACC",8,42.35,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","N30H I80A Q84S",3
"lib2","SARS-CoV-2","AACGCACTCAATTGGA",17,50.27,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S45D Q84T F99N",3
"lib2","SARS-CoV-2","AACGCACTGAATTGAA",2,5.48,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99I L183T",2
"lib2","SARS-CoV-2","AACGCACTGATTAGGT",2,4.16,NA,NA,NA,NA,NA,NA,"stop","P7* V20S V37P V77K R179L",5
"lib2","SARS-CoV-2","AACGCACTTACAAGCC",7,22.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58R N118R C150K G174I",4
"lib2","SARS-CoV-2","AACGCAGAAAGCGCGG",3,17.39,7.48,-3.36,0.22,2.39,1.15,0.01,">1 nonsynonymous","F134L Y175E K199L",3
"lib2","SARS-CoV-2","AACGCAGCATACCGAT",2,17.61,10.3,-0.54,0.1,2.88,1.15,0,">1 nonsynonymous","P7L T148L",2
"lib2","SARS-CoV-2","AACGCAGCCATATCGA",5,14.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F62D P82Q",2
"lib2","SARS-CoV-2","AACGCAGCGCTGGTTC",18,180.01,10.14,-0.69,0.07,2.37,1.03,0,">1 nonsynonymous","N64S F99L K128T",3
"lib2","SARS-CoV-2","AACGCAGGTTATGTTA",3,22.1,10.7,-0.14,0.05,2.93,1.05,0,">1 nonsynonymous","T3A V37C E141T",3
"lib2","SARS-CoV-2","AACGCAGTGTTATTAT",2,9.31,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N13V F70K V115T F167V",4
"lib2","SARS-CoV-2","AACGCATAATGCCACA",7,0,NA,NA,NA,NA,NA,NA,"stop","L162T V181* A190I",3
"lib2","SARS-CoV-2","AACGCATAATTCCATG",6,67.97,10.78,-0.05,0.05,2.99,1.03,0,">1 nonsynonymous","Y35V A190T K199S",3
"lib2","SARS-CoV-2","AACGCATATCTAGTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G A22S S36Y A42E G172A",5
"lib2","SARS-CoV-2","AACGCATATGCCCTCG",5,32.34,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6S F12R F99I",3
"lib2","SARS-CoV-2","AACGCATGCAGTAGAG",6,0.69,NA,NA,NA,NA,NA,NA,"stop","A89* C150R",2
"lib2","SARS-CoV-2","AACGCATGTACCTGGC",1,8.23,10.14,-0.69,0.16,2.85,1.12,0.01,">1 nonsynonymous","N4R N64A Y119R",3
"lib2","SARS-CoV-2","AACGCATGTTTCCGAA",1,17.05,8.13,-2.7,0.24,1.5,1.15,0.04,">1 nonsynonymous","D112F T201R",2
"lib2","SARS-CoV-2","AACGCATTATCCGCTA",4,1.03,NA,NA,NA,NA,NA,NA,"stop","P7Q G51L K56* E76R N107G F134H L183F",7
"lib2","SARS-CoV-2","AACGCCAAACTATAAC",5,45.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11I N40F L57I W106K F134V I142Y Q168C",7
"lib2","SARS-CoV-2","AACGCCAAGAAAGACA",2,3.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","AACGCCAATGCAGAAA",3,18.71,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N58L Y121H K132Q G146L",4
"lib2","SARS-CoV-2","AACGCCACAAGTTAGG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","Y66A C150*",2
"lib2","SARS-CoV-2","AACGCCACGGAAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6E F12N V77* K87R L95N W106K",6
"lib2","SARS-CoV-2","AACGCCAGAGCTTGCT",1,6.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R Q84I P149R G155L",4
"lib2","SARS-CoV-2","AACGCCATAAAAACCG",8,93.49,10.79,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGCCATAACTCCCA",7,131.34,10.81,-0.02,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGCCCAAAATTTCA",12,63.66,9.24,-1.59,0.12,1.57,1.18,0.01,">1 nonsynonymous","S19L E141D",2
"lib2","SARS-CoV-2","AACGCCCACCGCTACC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F12Y S129I K199*",3
"lib2","SARS-CoV-2","AACGCCCATGGCATAA",4,45.83,10.66,-0.17,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGCCGACCCGCAAG",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M D97T",2
"lib2","SARS-CoV-2","AACGCCGCATTTAGTA",5,37.04,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F12R S41C A89S E135K P169V",5
"lib2","SARS-CoV-2","AACGCCGCCAGGATTT",2,41.31,6.23,-4.61,0.52,1.5,1.2,0.01,">1 nonsynonymous","F44M V103L Q176A",3
"lib2","SARS-CoV-2","AACGCCGGCTTAGTAG",7,0.39,NA,NA,NA,NA,NA,NA,"stop","V77* A105L",2
"lib2","SARS-CoV-2","AACGCCGTTTTTAACA",2,53.81,9.75,-1.08,0.06,2.91,1.07,0,">1 nonsynonymous","S53E N118K",2
"lib2","SARS-CoV-2","AACGCCTAAAGTGCCT",2,10.44,6,-4.84,2,1.5,1.11,0.05,">1 nonsynonymous","D68V Y119R G146L",3
"lib2","SARS-CoV-2","AACGCCTATTTACGGT",6,110.34,10.84,0.01,0.05,2.91,1.1,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","AACGCCTGAATGTCTA",3,143.26,8.67,-2.17,0.05,2.85,1.07,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","AACGCCTGAGACGGAG",1,1.44,NA,NA,NA,NA,NA,NA,"stop","A81* V103H E186F",3
"lib2","SARS-CoV-2","AACGCCTTTTACCAAA",1,32.38,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","S113M Y175D",2
"lib2","SARS-CoV-2","AACGCGAAAAACGAAG",1,36.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19W T100P Q176G",3
"lib2","SARS-CoV-2","AACGCGAAAAGAACAT",3,24.91,6.72,-4.11,0.11,1.5,1.09,0,">1 nonsynonymous","D59A P133I E141R G166I",4
"lib2","SARS-CoV-2","AACGCGAAAGTATTAC",8,66.06,9.02,-1.81,0.06,2.96,1.02,0,">1 nonsynonymous","D90M Y119F G166M",3
"lib2","SARS-CoV-2","AACGCGAAGCCGTCCG",3,31.59,10.03,-0.8,0.11,2.39,1.04,0.01,">1 nonsynonymous","L5N A14G N110F N130E",4
"lib2","SARS-CoV-2","AACGCGACATATGTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib2","SARS-CoV-2","AACGCGACTAATGCCG",1,40.24,6,-4.84,0.82,3,1.12,0,">1 nonsynonymous","I88D V173T",2
"lib2","SARS-CoV-2","AACGCGAGATGCGAGA",4,32.72,10.27,-0.57,0.06,2.8,1.07,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","AACGCGAGGAGTTCAA",1,11.35,10.65,-0.19,0.1,2.93,1.12,0,">1 nonsynonymous","F44G N130R P191C",3
"lib2","SARS-CoV-2","AACGCGCAGCGTAGAA",8,136.18,10.83,-0.01,0.05,2.95,1.07,0,"1 nonsynonymous","S36A",1
"lib2","SARS-CoV-2","AACGCGCATGAAGACA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","L60* L95S",2
"lib2","SARS-CoV-2","AACGCGCCATCAATAA",2,12.14,6,-4.84,1.33,1.5,1.02,0,">1 nonsynonymous","E10V G86C L95I",3
"lib2","SARS-CoV-2","AACGCGCCGGGGTTGT",6,71.94,10.77,-0.06,0.05,2.86,1.14,0,">1 nonsynonymous","I2T A18N",2
"lib2","SARS-CoV-2","AACGCGCTGGCGAAAT",2,49.44,10.82,-0.01,0.05,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGCGGAAATCGAGG",1,19.64,9.91,-0.93,0.12,2.24,1.12,0,"1 nonsynonymous","P82I",1
"lib2","SARS-CoV-2","AACGCGGGTTAAAAAA",2,48.31,8.22,-2.62,0.1,2.05,1.07,0.01,"1 nonsynonymous","S108Y",1
"lib2","SARS-CoV-2","AACGCGGTAGCTAAAA",3,21.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F62H A81T V115A G155R",4
"lib2","SARS-CoV-2","AACGCGGTTACTTACT",2,15.63,6,-4.84,1.29,1.5,1.14,0.01,">1 nonsynonymous","A42S N110V L125H Y165R",4
"lib2","SARS-CoV-2","AACGCGTGTGATTGAT",2,11.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D90G N107L K128D",3
"lib2","SARS-CoV-2","AACGCGTTGTATTGCT",3,3.85,NA,NA,NA,NA,NA,NA,"stop","N4R T15K Y175*",3
"lib2","SARS-CoV-2","AACGCTAAAAAATCTG",10,166.1,10.27,-0.56,0.03,2.87,1.08,0,">1 nonsynonymous","C61V T140L Y143H",3
"lib2","SARS-CoV-2","AACGCTAAACGTCATT",6,0,NA,NA,NA,NA,NA,NA,"stop","A89M C102* T201Q",3
"lib2","SARS-CoV-2","AACGCTAAGCGGTAAA",9,31.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G74W Q144L N157V",3
"lib2","SARS-CoV-2","AACGCTAAGTATCAAT",5,155.72,10.64,-0.2,0.03,2.94,1.06,0,"1 nonsynonymous","Y121Q",1
"lib2","SARS-CoV-2","AACGCTAATCTAGATC",3,29.2,10.16,-0.68,0.05,2.84,1.05,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","AACGCTACAGGAACAT",1,50.32,10.33,-0.5,0.04,2.94,1.01,0,">1 nonsynonymous","S36L T63L",2
"lib2","SARS-CoV-2","AACGCTACATAGTACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","G9V S53N G86D R136S G172*",5
"lib2","SARS-CoV-2","AACGCTACGGTTGACT",10,98.93,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T100L S129R F167D",3
"lib2","SARS-CoV-2","AACGCTACGTGACATT",1,17.04,9.05,-1.78,0.41,1.5,1.01,0.05,">1 nonsynonymous","D90T N120Y I138G",3
"lib2","SARS-CoV-2","AACGCTATAATCGAAG",3,74.66,10.62,-0.22,0.04,2.94,1.06,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","AACGCTATGCACTGTT",5,42.4,10.39,-0.45,0.05,2.9,1.07,0,">1 nonsynonymous","T15N S29R A42S",3
"lib2","SARS-CoV-2","AACGCTCAAATAACAG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","A22S S29T D112* N157R",4
"lib2","SARS-CoV-2","AACGCTCACTAAATTC",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H D97N Y119S R179I S200G",5
"lib2","SARS-CoV-2","AACGCTCATTGTTTTA",9,80.2,10.7,-0.14,0.06,2.86,1.13,0,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","AACGCTCGCTGTTAAG",10,72.53,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C6I D75Y G146V",3
"lib2","SARS-CoV-2","AACGCTCTACCAGCTT",1,52.16,10.36,-0.47,0.05,2.93,1,0,">1 nonsynonymous","S43A S53G L60S",3
"lib2","SARS-CoV-2","AACGCTGAATAAGTGA",1,55.1,10.77,-0.07,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGCTGATTGCGAAT",2,25.35,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","L5A Q84K S108M F167M K199P",5
"lib2","SARS-CoV-2","AACGCTGCGTACCCGA",7,98.19,10.35,-0.49,0.04,2.84,1.07,0,">1 nonsynonymous","L60A Y123V",2
"lib2","SARS-CoV-2","AACGCTTATATACTCC",5,105.66,10.76,-0.07,0.05,2.95,1.08,0,">1 nonsynonymous","S45H I138V",2
"lib2","SARS-CoV-2","AACGCTTATTTATATA",8,13.2,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","G83W T100S V181A P197S",4
"lib2","SARS-CoV-2","AACGCTTCCGATAAAC",7,22.1,6,-4.84,1.64,3,1.19,0.01,">1 nonsynonymous","C61L Y91N D98R I104S",4
"lib2","SARS-CoV-2","AACGCTTCGAATATAA",14,279.67,7.89,-2.95,0.15,1.5,1.11,0.01,">1 nonsynonymous","N157Y G174P",2
"lib2","SARS-CoV-2","AACGCTTCTTTTTGCG",1,43.04,10.75,-0.09,0.04,2.95,1.08,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","AACGCTTTCTTGAGGC",15,245.59,9.81,-1.03,0.04,2.17,1.04,0,">1 nonsynonymous","S69K K199V",2
"lib2","SARS-CoV-2","AACGGAAAAACCACTT",3,43.67,9.99,-0.85,0.2,1.84,1.19,0.02,">1 nonsynonymous","D97S F185C",2
"lib2","SARS-CoV-2","AACGGAAAAATAGGGA",1,70,10.29,-0.55,0.05,2.95,1.08,0,">1 nonsynonymous","F17W E154L",2
"lib2","SARS-CoV-2","AACGGAAAATGCAGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97A P149N G172N",3
"lib2","SARS-CoV-2","AACGGAAACAATAAGT",3,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y Y50T Y121D F156K K199T",5
"lib2","SARS-CoV-2","AACGGAAACAATTCTC",3,111.35,10.81,-0.02,0.04,3,1.02,0,">1 nonsynonymous","G9A T140D T201M",3
"lib2","SARS-CoV-2","AACGGAACCAACCGAT",3,49.41,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","S19L G83I",2
"lib2","SARS-CoV-2","AACGGAACCATTTAAT",1,20.07,10.49,-0.35,0.08,2.91,1.11,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","AACGGAAGAAATACTT",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M G51T A105R I142N V173H",5
"lib2","SARS-CoV-2","AACGGAAGGTAAGAGT",6,39.95,9.65,-1.18,0.09,2.35,1.1,0,">1 nonsynonymous","A14L A145E E154L N171F",4
"lib2","SARS-CoV-2","AACGGAAGTTAGCTTA",9,91.99,10.49,-0.34,0.04,2.9,1.1,0,"1 nonsynonymous","P169Y",1
"lib2","SARS-CoV-2","AACGGAATAATCTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37L F70L K94S Y175D Y178I T201*",6
"lib2","SARS-CoV-2","AACGGAATACTTTAAG",8,63.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P54G A89T L95E",3
"lib2","SARS-CoV-2","AACGGAATATAACCCT",7,157.03,10.3,-0.54,0.05,2.91,1.1,0,">1 nonsynonymous","K87L V173H",2
"lib2","SARS-CoV-2","AACGGAATCTAGAAAA",12,55.14,6.86,-3.98,0.23,1.58,1.15,0.01,">1 nonsynonymous","L5P L162G",2
"lib2","SARS-CoV-2","AACGGAATTCGCCGGT",1,23.28,10.53,-0.3,0.06,2.99,1.05,0,"1 nonsynonymous","G116W",1
"lib2","SARS-CoV-2","AACGGAATTCTCCTCC",4,73.67,9.7,-1.13,0.07,2.23,1.09,0,">1 nonsynonymous","Y35K P149F",2
"lib2","SARS-CoV-2","AACGGACAATATTGCA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y Y66W P96K F160R Y165R",5
"lib2","SARS-CoV-2","AACGGACACTAAGTAC",11,187.63,10.06,-0.77,0.06,2.7,1.02,0,">1 nonsynonymous","F12L Y35N L60M S129T",4
"lib2","SARS-CoV-2","AACGGACAGTTGGTCG",8,28.65,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","K48W G83M A105K T140R",4
"lib2","SARS-CoV-2","AACGGACCACTCCACT",2,43.67,10.52,-0.32,0.07,2.96,1.05,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","AACGGACCTAAATGCT",1,31.34,10.27,-0.57,0.07,2.94,1.06,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","AACGGACCTTCGAATC",8,48.1,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S19Q S36F T63G P96S K198P",5
"lib2","SARS-CoV-2","AACGGACTCATAGGTA",4,49.53,10.04,-0.8,0.04,2.97,1.03,0,">1 nonsynonymous","T63I P169L T201S",3
"lib2","SARS-CoV-2","AACGGAGAATCCCAAA",9,93.23,9.59,-1.24,0.06,2,1.04,0,">1 nonsynonymous","A33W A105L K198D",3
"lib2","SARS-CoV-2","AACGGAGAGCAATCAG",2,13.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34Y N58S Y91G G166R",4
"lib2","SARS-CoV-2","AACGGAGAGCATTTGT",3,141.35,9.19,-1.64,0.07,2.63,1.12,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","AACGGAGGCCTTAAGG",2,67.51,9.63,-1.2,0.04,3,1.04,0,">1 nonsynonymous","Y35M D98N E141M G174C",4
"lib2","SARS-CoV-2","AACGGAGGGAAAATAA",5,50.51,6.25,-4.58,0.87,1.5,1.23,0.04,">1 nonsynonymous","F44V R127Y",2
"lib2","SARS-CoV-2","AACGGAGTCTAGTGAT",3,124.64,10.85,0.01,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGGAGTGGCCAGTA",5,132.01,10.07,-0.77,0.04,2.96,1.05,0,">1 nonsynonymous","Y143M Q163R",2
"lib2","SARS-CoV-2","AACGGAGTTTCATAGT",7,2.83,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","AACGGATACTGGCTGA",1,37.01,8.85,-1.99,0.08,2.12,1.08,0,">1 nonsynonymous","Y39T F44N V52D",3
"lib2","SARS-CoV-2","AACGGATAGCTCTACC",3,35.98,10.03,-0.8,0.07,2.08,1.08,0,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","AACGGATCAGGCACCA",11,6.08,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AACGGCAAATTAAAAA",2,19.42,10.46,-0.37,0.07,2.91,1.04,0,"1 nonsynonymous","N30Y",1
"lib2","SARS-CoV-2","AACGGCACAATGCGGA",2,6.03,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","V11F V103R Y119S R136K P149T",5
"lib2","SARS-CoV-2","AACGGCACGACCCCGT",6,85.68,10.74,-0.1,0.04,2.89,1.08,0,"1 nonsynonymous","V173E",1
"lib2","SARS-CoV-2","AACGGCCACCCCACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","P96K G155* S200M",3
"lib2","SARS-CoV-2","AACGGCCCCGATAATA",2,7.4,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S69R R124S",2
"lib2","SARS-CoV-2","AACGGCCGAGAAAAAA",6,78.75,10.79,-0.05,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGGCCTGCTAATTA",7,1.24,NA,NA,NA,NA,NA,NA,"stop","C6M A33* K56L E76K K114N K199*",6
"lib2","SARS-CoV-2","AACGGCTACAGAATCC",1,17.24,10.57,-0.27,0.07,3,1.01,0,">1 nonsynonymous","Y66V E186H",2
"lib2","SARS-CoV-2","AACGGCTACCAACCGG",3,52.48,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","Y50Q T63V A89L",3
"lib2","SARS-CoV-2","AACGGCTAGTAAATTA",2,15.36,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","P7I V103D F126G P133R I142S",5
"lib2","SARS-CoV-2","AACGGCTCGAAGTACT",2,36.16,6.03,-4.81,1.39,1.5,1.14,0.03,">1 nonsynonymous","F44T Y91L G117P",3
"lib2","SARS-CoV-2","AACGGCTTACAATTAA",4,87.74,10.79,-0.05,0.02,2.98,1.03,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","AACGGCTTATAAACAA",4,2.36,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","AACGGCTTGGGCGCCT",5,28.61,8.06,-2.77,0.4,1.5,1.16,0.05,">1 nonsynonymous","S45A T55A Y119T E141Q V173T",5
"lib2","SARS-CoV-2","AACGGCTTGTAGTATC",6,69.52,10.66,-0.18,0.04,2.98,1.03,0,"1 nonsynonymous","S184M",1
"lib2","SARS-CoV-2","AACGGGAAATCGCAAT",16,340.34,10.18,-0.66,0.05,2.69,1.02,0,">1 nonsynonymous","G9R A105G V173M",3
"lib2","SARS-CoV-2","AACGGGAATCCAATGT",1,2.11,NA,NA,NA,NA,NA,NA,"stop","N4* E10N C49D K56F I138F N151T",6
"lib2","SARS-CoV-2","AACGGGAGAGACCTGA",6,148.73,10.16,-0.67,0.05,2.78,1.13,0,">1 nonsynonymous","L60Y N118E T140G",3
"lib2","SARS-CoV-2","AACGGGCCCGGCACTG",1,12.6,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","K48W V77S N107T",3
"lib2","SARS-CoV-2","AACGGGCCGTAAGTAT",10,0.09,NA,NA,NA,NA,NA,NA,"stop","T55* Y119Q K199*",3
"lib2","SARS-CoV-2","AACGGGCGAGGTAACC",3,20.33,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C49L G86D D90M Y119Q",4
"lib2","SARS-CoV-2","AACGGGCGCTTCTATT",11,71.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14V F126E T170V",3
"lib2","SARS-CoV-2","AACGGGCGTTACAAAA",6,62.04,9.7,-1.13,0.09,2.41,1.08,0,">1 nonsynonymous","K26T E76F",2
"lib2","SARS-CoV-2","AACGGGTACAAACACC",3,34.31,8.8,-2.04,0.24,1.68,1.14,0.03,">1 nonsynonymous","I104L G117W F160A",3
"lib2","SARS-CoV-2","AACGGGTTACTCTTAA",5,20.12,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","S113L N120S L131E",3
"lib2","SARS-CoV-2","AACGGTAAAGAGATAG",7,147.7,10.26,-0.58,0.03,2.87,1.03,0,">1 nonsynonymous","P7T A81E S184W T201K",4
"lib2","SARS-CoV-2","AACGGTAACCATGATA",6,65.52,10.94,0.1,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGGTACGGAAATCA",31,158.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T F99P S184I",3
"lib2","SARS-CoV-2","AACGGTATCAGTGCTA",3,71.46,10.07,-0.76,0.06,2.8,1.04,0,">1 nonsynonymous","F62S S164L",2
"lib2","SARS-CoV-2","AACGGTATTTACCGGT",11,99.38,10.22,-0.62,0.05,2.82,1,0,">1 nonsynonymous","N13L S43T",2
"lib2","SARS-CoV-2","AACGGTCAAAGGTAAA",1,15.77,10.3,-0.53,0.06,3,1,0,"1 nonsynonymous","V20A",1
"lib2","SARS-CoV-2","AACGGTCTACACAAGG",3,1.48,NA,NA,NA,NA,NA,NA,"stop","S43* D68Q D98G D112W",4
"lib2","SARS-CoV-2","AACGGTCTAGACCTAA",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V Y50N Y123M A190N",4
"lib2","SARS-CoV-2","AACGGTCTGGCTCGTA",2,1.87,NA,NA,NA,NA,NA,NA,"stop","F8* Y39H T46R D90A Y119L G174K",6
"lib2","SARS-CoV-2","AACGGTGCCCCAACAG",5,17.87,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","K56P N107F S129T",3
"lib2","SARS-CoV-2","AACGGTGGAATTTAAC",2,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L I72S Q84F",3
"lib2","SARS-CoV-2","AACGGTGGCACAAAAA",14,383.35,10.32,-0.52,0.03,2.88,1.07,0,">1 nonsynonymous","S53F T140C",2
"lib2","SARS-CoV-2","AACGGTTAAACTAGAT",3,20.28,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F17I K56T Y93L",3
"lib2","SARS-CoV-2","AACGGTTATTTATAAC",8,7.66,NA,NA,NA,NA,NA,NA,"stop","D98E A105*",2
"lib2","SARS-CoV-2","AACGGTTTCGATACTC",1,0.43,NA,NA,NA,NA,NA,NA,"stop","T63L E141*",2
"lib2","SARS-CoV-2","AACGGTTTGTCCACCA",9,231.34,10.29,-0.55,0.04,2.74,1.04,0,">1 nonsynonymous","K56W F62A",2
"lib2","SARS-CoV-2","AACGGTTTTCTTACAA",2,148.61,8.34,-2.49,0.12,2.84,1.06,0.01,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","AACGTAAAAATCCCTC",7,145.6,7.87,-2.97,0.12,1.62,1.15,0.01,">1 nonsynonymous","C6M V37G G117K",3
"lib2","SARS-CoV-2","AACGTAAAAGACTAGA",2,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N P96S",2
"lib2","SARS-CoV-2","AACGTAAAAGCTAGTG",4,21.49,10.56,-0.28,0.07,2.84,1.13,0,">1 nonsynonymous","Y121Q K128R",2
"lib2","SARS-CoV-2","AACGTAAAAGTTTCAG",11,96.07,10.74,-0.09,0.02,2.95,1.03,0,">1 nonsynonymous","L60V S164N",2
"lib2","SARS-CoV-2","AACGTAAAATATAGGC",5,75.48,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6Y D59Y G117F P149S E186N",5
"lib2","SARS-CoV-2","AACGTAAACTACACAT",3,14.95,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","A81T Q84C V103F L162V",4
"lib2","SARS-CoV-2","AACGTAAAGAGACGGT",2,26.48,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N4L Y35F T85M N110Y N151P R179K",6
"lib2","SARS-CoV-2","AACGTAAATAACACAC",1,12.11,6,-4.84,2,1.5,1.08,0.08,">1 nonsynonymous","L162A R179P T201A",3
"lib2","SARS-CoV-2","AACGTAAATATTTAAC",3,35.36,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4H C61L N107A G166D Y175S",5
"lib2","SARS-CoV-2","AACGTAACAAAATTAA",4,43.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33E P96V I142G",3
"lib2","SARS-CoV-2","AACGTAACATGCTTTG",6,36.96,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N4M P82K L95F P149R Q163H",5
"lib2","SARS-CoV-2","AACGTAACCAAGAGTT",7,170.13,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","AACGTAAGATTCCCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","V37M F47S C61* I88S",4
"lib2","SARS-CoV-2","AACGTAAGCCACTTCC",1,36.1,8.6,-2.23,0.13,2.58,1.11,0.01,">1 nonsynonymous","N4S T15D G83N G117V",4
"lib2","SARS-CoV-2","AACGTAAGCCCACAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59M V103T E135A",3
"lib2","SARS-CoV-2","AACGTAAGTGATCCAT",4,25.65,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","E10D Y21D P54I A89Y I104M V153G",6
"lib2","SARS-CoV-2","AACGTAATAGCCTTAA",6,112.18,8.16,-2.68,0.16,1.83,1.08,0.01,">1 nonsynonymous","S41F K56E D137V F156N",4
"lib2","SARS-CoV-2","AACGTACAAAAACACT",4,210.75,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C31T Y119I G152T Q176G",4
"lib2","SARS-CoV-2","AACGTACAAAAACTTT",1,19.74,8.98,-1.86,0.3,1.94,1.05,0.04,">1 nonsynonymous","A89I Q144G",2
"lib2","SARS-CoV-2","AACGTACACCTTTTGT",8,50.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R73I Q84H K114A P133L T170V",5
"lib2","SARS-CoV-2","AACGTACACTGGTGGT",1,32.94,10.84,0,0.07,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGTACATATAAACC",4,181.73,10.2,-0.64,0.03,2.93,1.02,0,"1 nonsynonymous","C6A",1
"lib2","SARS-CoV-2","AACGTACCTAATGCGA",2,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I G155L G172L F185T",4
"lib2","SARS-CoV-2","AACGTACCTACATACT",10,167.43,9.61,-1.23,0.05,1.99,1.08,0,">1 nonsynonymous","G51E N64T G83S",3
"lib2","SARS-CoV-2","AACGTACCTGTATCGC",2,38.63,9.96,-0.88,0.07,2.83,1.06,0,">1 nonsynonymous","T100R Y121K",2
"lib2","SARS-CoV-2","AACGTACTAAACCAAA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","P7Q N30L A42* N92L F99T G146D",6
"lib2","SARS-CoV-2","AACGTACTATAACGCG",5,5.69,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","L95K",1
"lib2","SARS-CoV-2","AACGTAGAAATAACTA",1,11.62,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I88R L122N",2
"lib2","SARS-CoV-2","AACGTAGCTGTGCTAG",5,75.94,10.87,0.04,0.07,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGTAGGCGATGACT",2,14.62,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","A105P D112L N120V",3
"lib2","SARS-CoV-2","AACGTAGGTGTTTTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D Y50V T63N G101E F167S",5
"lib2","SARS-CoV-2","AACGTAGTCTGACACA",14,113.29,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12K L60Y G86V D98F",4
"lib2","SARS-CoV-2","AACGTATACCGAACTG",9,78.23,10.28,-0.55,0.06,2.89,1.09,0,">1 nonsynonymous","Y35N T63K",2
"lib2","SARS-CoV-2","AACGTATACTATTACA",3,114.87,10.96,0.12,0.05,2.96,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGTATACTTCTTAA",6,24.12,9.84,-1,0.25,1.73,1.09,0.02,">1 nonsynonymous","N58V A89N",2
"lib2","SARS-CoV-2","AACGTATCACTAACGT",2,33.17,10.71,-0.12,0.04,2.98,1.05,0,"1 nonsynonymous","N64E",1
"lib2","SARS-CoV-2","AACGTATCCAATAATG",5,57.59,8.83,-2.01,0.09,1.97,1.14,0,">1 nonsynonymous","L60F K94G F156H S200I",4
"lib2","SARS-CoV-2","AACGTATCCTCAATAA",3,37.83,10.79,-0.05,0.05,2.97,1.05,0,"1 nonsynonymous","G196R",1
"lib2","SARS-CoV-2","AACGTATGACCACATG",19,193.16,10.29,-0.55,0.03,2.85,1.01,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","AACGTATGTGTAAAAC",6,14.86,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","Y50K F99Q I104W K128R",4
"lib2","SARS-CoV-2","AACGTATGTGTGTTTT",5,40.79,6.22,-4.62,0.55,1.5,1.18,0.01,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","AACGTCAAAATATGAC",2,15.14,10.54,-0.3,0.07,2.85,1.12,0,">1 nonsynonymous","P7D R127S",2
"lib2","SARS-CoV-2","AACGTCAACGAAAAAA",8,33.99,6.3,-4.54,0.8,1.5,1.2,0.03,">1 nonsynonymous","N64Y P82Q N92R N130L S200F",5
"lib2","SARS-CoV-2","AACGTCAATCAAATAT",17,1.97,NA,NA,NA,NA,NA,NA,"stop","D75A N107* G117F S184*",4
"lib2","SARS-CoV-2","AACGTCACACCAATTT",7,125.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51S Y119A G146Q",3
"lib2","SARS-CoV-2","AACGTCACGCGAGAAG",7,30.6,6,-4.84,1.74,1.5,1.13,0.01,">1 nonsynonymous","L5Q Y91S A105K Q144V",4
"lib2","SARS-CoV-2","AACGTCAGACAGTAAT",2,122.66,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","R73W G83S D112H",3
"lib2","SARS-CoV-2","AACGTCAGATCTGGTA",10,36.81,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","G9V L95Y",2
"lib2","SARS-CoV-2","AACGTCAGCCGAACGG",3,1.05,NA,NA,NA,NA,NA,NA,"stop","C6F E10D S69* K87R D98F N107L",6
"lib2","SARS-CoV-2","AACGTCATATAACCTG",23,205.63,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G116L C150F",2
"lib2","SARS-CoV-2","AACGTCCAATGGCGCT",3,61.23,10.15,-0.69,0.07,2.83,1.02,0,">1 nonsynonymous","G9L L57M G152D",3
"lib2","SARS-CoV-2","AACGTCCCAAACAAAA",2,19.52,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","I2F C49L Y119W",3
"lib2","SARS-CoV-2","AACGTCCCACTTTACA",2,6.11,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","Y35S P82Y P133Y",3
"lib2","SARS-CoV-2","AACGTCCCTTCCGCCT",1,44.97,10.83,0,0.05,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGTCCTACACGGTT",5,58.79,10.34,-0.5,0.05,2.88,1.11,0,">1 nonsynonymous","K48R G83L F156H",3
"lib2","SARS-CoV-2","AACGTCCTTGTCCTAG",4,26.77,6.32,-4.51,0.8,1.5,1.16,0.04,">1 nonsynonymous","R25T Y39V Y121S",3
"lib2","SARS-CoV-2","AACGTCGTACATGGGT",3,80.01,9.76,-1.07,0.11,1.95,1.1,0.01,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","AACGTCTAACATTAGT",5,25.38,8.67,-2.17,0.08,2.77,1.03,0,">1 nonsynonymous","T3S A33Y G83C Y119F F160S G166I",6
"lib2","SARS-CoV-2","AACGTCTGACAGCCAT",1,10.38,10.84,0.01,0.07,3,1.01,0,">1 nonsynonymous","I2S N64A",2
"lib2","SARS-CoV-2","AACGTCTGCATAACGA",2,19.46,7.41,-3.42,0.31,1.5,1.19,0.03,">1 nonsynonymous","R73K V182S",2
"lib2","SARS-CoV-2","AACGTCTTAACCGAAC",2,21.31,8.11,-2.73,0.14,2.14,1,0.01,">1 nonsynonymous","S29N Q176W",2
"lib2","SARS-CoV-2","AACGTCTTAACTGCAA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","Y35C T55* K94L V103I S139F G166E",6
"lib2","SARS-CoV-2","AACGTGAATAGCGACT",4,79.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K94T P169R P177F",3
"lib2","SARS-CoV-2","AACGTGCAAAGGGTGA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F62C F99Q",3
"lib2","SARS-CoV-2","AACGTGCAATCAATCG",2,6.01,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43P R127G N157L",3
"lib2","SARS-CoV-2","AACGTGCACAGGGATA",7,63.18,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T46V W106T Y123L A145F H189I",5
"lib2","SARS-CoV-2","AACGTGCGCCGTAAAA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99I K114N",2
"lib2","SARS-CoV-2","AACGTGGAAAATCCTC",5,66.98,7.16,-3.67,0.27,1.5,1.19,0.01,">1 nonsynonymous","Y39E C150V",2
"lib2","SARS-CoV-2","AACGTGGACCTGCTTC",8,145.93,10.14,-0.69,0.04,2.89,1.04,0,">1 nonsynonymous","N58T T148P",2
"lib2","SARS-CoV-2","AACGTGGCACTGATAG",1,7.46,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","P7L G101F K128H",3
"lib2","SARS-CoV-2","AACGTGGCGGAAAATA",11,77.48,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","E10I V37T S45L D75P L187H",5
"lib2","SARS-CoV-2","AACGTGTGGGATACAC",5,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A F156S",2
"lib2","SARS-CoV-2","AACGTTAAAACCAGAG",2,12.56,NA,NA,NA,NA,NA,0.37,"1 nonsynonymous","P177D",1
"lib2","SARS-CoV-2","AACGTTAAACACCTTT",12,65.98,6,-4.84,2,1.5,1.24,0.01,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","AACGTTAAACTAGTTA",5,32.96,9.55,-1.29,0.07,2.71,1.1,0,">1 nonsynonymous","T15S N30S S164I",3
"lib2","SARS-CoV-2","AACGTTAAATCCAATT",2,7.82,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G83W F134S C150I",3
"lib2","SARS-CoV-2","AACGTTAAGCGGTTAA",6,12.05,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G9W I88F F99P P149L",4
"lib2","SARS-CoV-2","AACGTTAATAAATACG",31,382.17,10.82,-0.01,0.05,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGTTAATCATTTGG",9,41.52,6,-4.84,2,3,1.16,0.01,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","AACGTTAATGGAGATG",4,59.82,10.91,0.07,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGTTAATTCCTTCG",8,7.31,NA,NA,NA,NA,NA,NA,"stop","N1* C49M R73S F126C",4
"lib2","SARS-CoV-2","AACGTTACAAGATTTT",5,22.76,8.87,-1.96,0.28,1.5,1.1,0.03,">1 nonsynonymous","A18W K26W I104W P197R",4
"lib2","SARS-CoV-2","AACGTTACGAGAACGC",2,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112A N151I",2
"lib2","SARS-CoV-2","AACGTTATAAGGTTAG",15,151.24,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N13I S29R N58F C150H",4
"lib2","SARS-CoV-2","AACGTTATCATCTGCA",5,209.61,10.77,-0.06,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AACGTTCAAAATAAAC",1,7.25,7.72,-3.12,0.14,2.55,1.07,0,">1 nonsynonymous","L38T F44C D97E",3
"lib2","SARS-CoV-2","AACGTTCAAATATTAA",2,104.46,10.17,-0.66,0.06,2.82,1.06,0,">1 nonsynonymous","F44C E141D",2
"lib2","SARS-CoV-2","AACGTTCACAAAGTAG",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86W L111P P191L P197K",4
"lib2","SARS-CoV-2","AACGTTCAGATTGAAA",4,30.98,10.71,-0.12,0.1,2.86,1.12,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","AACGTTCATCTGACAA",6,17.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N64D I104C S139I L162Q",4
"lib2","SARS-CoV-2","AACGTTCCAAATGGTA",15,89.17,6.03,-4.81,0.7,1.5,1.19,0.01,">1 nonsynonymous","R27T T55P D137R Q176W K198W",5
"lib2","SARS-CoV-2","AACGTTCCAACCTGGG",13,68.32,8.37,-2.46,0.11,1.77,1.15,0,">1 nonsynonymous","D90C Y121A",2
"lib2","SARS-CoV-2","AACGTTCCTTTGCAAA",11,209.49,10.75,-0.09,0.04,2.92,1.09,0,"1 nonsynonymous","V32E",1
"lib2","SARS-CoV-2","AACGTTCGACCAGTGT",7,72.93,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9A V32M G74P D98M Y165K Q176E K198Q",7
"lib2","SARS-CoV-2","AACGTTCGTAAACAGT",3,76.62,10.88,0.04,0.05,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AACGTTCGTAGAATTG",3,6.82,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2S W23R F47S E76W T85W P149T",6
"lib2","SARS-CoV-2","AACGTTCTCAGACAGC",1,8.81,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","S41W S113W N157I G174L",4
"lib2","SARS-CoV-2","AACGTTCTTTACCCTG",3,22.73,8.82,-2.02,0.25,1.5,1.03,0.03,">1 nonsynonymous","Y91T L95M",2
"lib2","SARS-CoV-2","AACGTTGAAACATTAG",5,41.56,6.33,-4.51,0.61,1.51,1.21,0.03,">1 nonsynonymous","C6T P96C",2
"lib2","SARS-CoV-2","AACGTTGCAAAGCCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119K P149F",2
"lib2","SARS-CoV-2","AACGTTGCCGAGATCA",3,14.49,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","C31S C49K P54T A105G N109L S129K Y178E A190G P197M",9
"lib2","SARS-CoV-2","AACGTTGGAAAACCAT",3,10.16,10.75,-0.09,0.09,2.87,1.16,0,">1 nonsynonymous","G9E S41N N151F",3
"lib2","SARS-CoV-2","AACGTTGTTATATATA",8,78.16,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3S F12A Y21M K56S N107R E141P",6
"lib2","SARS-CoV-2","AACGTTGTTGCAGCAG",6,62.83,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C61A D68A A89Y C102W",4
"lib2","SARS-CoV-2","AACGTTTACCAAAAGT",9,103.87,6,-4.84,1.18,1.5,1.12,0.01,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","AACGTTTACCATGGAC",4,6.94,NA,NA,NA,NA,NA,0.58,">1 nonsynonymous","A42W T55V A67S Y91L Y123K E141S P197R",7
"lib2","SARS-CoV-2","AACGTTTATCTCAATA",4,8.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D97Y N107T E186L",3
"lib2","SARS-CoV-2","AACGTTTGCCTTATGC",3,6.38,7.42,-3.42,0.61,1.5,1.14,0.04,">1 nonsynonymous","T15R V37L D112L Y123W F156P",5
"lib2","SARS-CoV-2","AACGTTTGCGATTCTT",4,15.07,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","K56I F70W P96Y N130Y G174V A190V",6
"lib2","SARS-CoV-2","AACGTTTGTCCGCACA",9,27.2,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","D112W T148A",2
"lib2","SARS-CoV-2","AACGTTTTACACCATA",10,165.26,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N4L Y39Q C61L V103Y",4
"lib2","SARS-CoV-2","AACGTTTTATAAAGGT",10,131.64,8.78,-2.05,0.06,1.78,1.11,0,">1 nonsynonymous","N120T E135W",2
"lib2","SARS-CoV-2","AACGTTTTCAAAACAA",2,23.49,10.16,-0.68,0.08,2.78,1.17,0,"1 nonsynonymous","P7I",1
"lib2","SARS-CoV-2","AACGTTTTTAACATTC",3,21.18,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","S41T D97K R179F",3
"lib2","SARS-CoV-2","AACTAAAAAAAACTCT",2,23.46,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","L5S C49Q L122P S139H Y165E S200H",6
"lib2","SARS-CoV-2","AACTAAAAAAACAGCA",19,128.79,10.74,-0.09,0.04,2.89,1.13,0,">1 nonsynonymous","L60Y G116R",2
"lib2","SARS-CoV-2","AACTAAAACATAAACG",2,6.26,10.34,-0.49,0.11,2.91,1.11,0.01,">1 nonsynonymous","R78T D98A",2
"lib2","SARS-CoV-2","AACTAAAACCATGAAC",5,73.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50I N64L V77L Y119L E141S V173S",6
"lib2","SARS-CoV-2","AACTAAAACCCCGTGC",13,184.37,9.02,-1.82,0.06,2.7,1.1,0,">1 nonsynonymous","S36H C61K G146R",3
"lib2","SARS-CoV-2","AACTAAAACGTCTGAT",2,34.03,10.69,-0.14,0.07,3,1.01,0,"1 nonsynonymous","A33G",1
"lib2","SARS-CoV-2","AACTAAAAGAATATCA",2,18.35,6.94,-3.9,0.38,1.5,1.09,0.03,">1 nonsynonymous","L60I C158T",2
"lib2","SARS-CoV-2","AACTAAAATACCTAAT",7,52.44,9.44,-1.4,0.06,2.73,1.07,0,">1 nonsynonymous","K26A N110H R136S T170S",4
"lib2","SARS-CoV-2","AACTAAAATTAATAAT",1,53.26,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G117F K132R G152M Y159W Y178T",5
"lib2","SARS-CoV-2","AACTAAACAAGAAAAG",8,41.95,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","G9V G101I",2
"lib2","SARS-CoV-2","AACTAAACAATAACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10K Y66* K128A V153G F167N",5
"lib2","SARS-CoV-2","AACTAAACACTAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N92Q A105* P197A",3
"lib2","SARS-CoV-2","AACTAAACAGAATAGG",1,12.87,10.89,0.05,0.1,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAAACATGTCATT",14,177.36,10.74,-0.09,0.03,2.94,1.04,0,"1 nonsynonymous","T148G",1
"lib2","SARS-CoV-2","AACTAAACCAGTATTT",2,17.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6S K26M K56T I72A A81V L131E Y178N",7
"lib2","SARS-CoV-2","AACTAAACCGGATGAT",1,63.58,9.77,-1.07,0.29,1.5,1.01,0.05,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","AACTAAACTTTCGGAT",5,21.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9C C49L G86T Q144K",4
"lib2","SARS-CoV-2","AACTAAAGAAAACAAG",5,59,9.61,-1.22,0.12,2.21,1.08,0.01,"1 nonsynonymous","R179H",1
"lib2","SARS-CoV-2","AACTAAAGAACTTCCT",11,167.59,9.26,-1.57,0.05,2.33,1.07,0,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","AACTAAAGAATAAAAT",12,165.88,9.86,-0.98,0.07,2.24,1.08,0,">1 nonsynonymous","E10V A67I T100S H189S",4
"lib2","SARS-CoV-2","AACTAAAGAATTACAT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","S45T F99* E186I",3
"lib2","SARS-CoV-2","AACTAAAGACTAAGCA",9,108.6,10.84,0,0.07,2.89,1.12,0,">1 nonsynonymous","S29H N110A",2
"lib2","SARS-CoV-2","AACTAAAGGAATAACA",13,85.9,6.25,-4.59,0.66,1.5,1.18,0.02,">1 nonsynonymous","I2A G101H Y121R",3
"lib2","SARS-CoV-2","AACTAAAGTCAAACCG",19,262.88,10.8,-0.03,0.04,2.91,1.08,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","AACTAAAGTCACTTAA",3,7.71,7.34,-3.49,0.38,1.5,1.05,0.02,">1 nonsynonymous","N13R Y121S E186V",3
"lib2","SARS-CoV-2","AACTAAATACTAAGGC",3,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P R27I V65K S147C G152S V173N",6
"lib2","SARS-CoV-2","AACTAAATATAACGAA",7,100.73,10.04,-0.8,0.07,2.62,1.03,0,">1 nonsynonymous","T3W C61P T140F",3
"lib2","SARS-CoV-2","AACTAAATATACATTT",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P L95D S139R Y159L",4
"lib2","SARS-CoV-2","AACTAAATATGTTGAC",1,8.38,10.12,-0.72,0.12,2.77,1.22,0.01,">1 nonsynonymous","V11L Y121F",2
"lib2","SARS-CoV-2","AACTAAATGAAGCAAA",10,114.03,10.47,-0.36,0.04,2.91,1.05,0,"1 nonsynonymous","I104T",1
"lib2","SARS-CoV-2","AACTAAATGACAAATA",8,17.37,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D68R A89Q P149L",3
"lib2","SARS-CoV-2","AACTAAATGCACACCT",3,58.03,10.89,0.05,0.04,2.92,1.09,0,">1 nonsynonymous","S43L V153I",2
"lib2","SARS-CoV-2","AACTAAATGTACTCAT",5,41.44,10.8,-0.04,0.07,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAAATTGCTGTAA",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L V37L T100I L162Q",4
"lib2","SARS-CoV-2","AACTAACAAGATAAAA",22,388.68,10.87,0.03,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAACAATACTTGG",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L F99S S129M I138L",4
"lib2","SARS-CoV-2","AACTAACACACAGTAC",4,147.6,10.12,-0.72,0.03,2.86,1.03,0,"1 nonsynonymous","D34W",1
"lib2","SARS-CoV-2","AACTAACAGAACATCC",4,113.13,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F8I V37S C61G V77K K94R F167R Q176S",7
"lib2","SARS-CoV-2","AACTAACAGCAAAAAA",11,8.4,NA,NA,NA,NA,NA,NA,"stop","S41W F47I F62*",3
"lib2","SARS-CoV-2","AACTAACAGTAGCTCT",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* Y93H T100C",3
"lib2","SARS-CoV-2","AACTAACATACACACT",1,13.41,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y66S A105I R124M",3
"lib2","SARS-CoV-2","AACTAACATGGACAAA",1,11.68,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5W A14S G152C P161N",4
"lib2","SARS-CoV-2","AACTAACCACGATTGT",7,154.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36A F44L L57M T63L C102Y",5
"lib2","SARS-CoV-2","AACTAACCCACGTAAC",6,0.77,NA,NA,NA,NA,NA,NA,"stop","P7* T15A G51I A105S F160L V173T",6
"lib2","SARS-CoV-2","AACTAACCCGCGCTAA",2,11.01,8.4,-2.44,0.24,1.5,1.11,0.03,">1 nonsynonymous","F47N K128C",2
"lib2","SARS-CoV-2","AACTAACCCTATAAAA",2,85.75,9.91,-0.93,0.05,2.78,1.03,0,">1 nonsynonymous","N1I Y35M Y91W T100F",4
"lib2","SARS-CoV-2","AACTAACCGTTGTCAT",4,7.34,NA,NA,NA,NA,NA,NA,"stop","G9* G83K C102S S147G L188F",5
"lib2","SARS-CoV-2","AACTAACGTATGCCAA",1,10.92,6.43,-4.4,0.69,1.5,1.08,0.03,">1 nonsynonymous","G86R E154R",2
"lib2","SARS-CoV-2","AACTAACTCAAGTTTA",2,11.47,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S36L N107Y V181F",3
"lib2","SARS-CoV-2","AACTAACTCAGTCAAT",2,3.81,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","AACTAACTCCCAGCAA",6,80.51,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S113E Y159H",2
"lib2","SARS-CoV-2","AACTAACTGGGAGAAC",5,100.96,10.5,-0.34,0.05,2.9,1.08,0,">1 nonsynonymous","C61E D90Y L122A",3
"lib2","SARS-CoV-2","AACTAACTGGTTGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V20S D90Y Y121*",3
"lib2","SARS-CoV-2","AACTAACTTAAATTTA",7,53.78,9.76,-1.08,0.09,2.38,1.05,0,">1 nonsynonymous","C6N C61A E135M",3
"lib2","SARS-CoV-2","AACTAACTTACGATAA",5,23.9,6.12,-4.72,0.88,1.5,1.07,0.03,">1 nonsynonymous","V65W P82F A105W",3
"lib2","SARS-CoV-2","AACTAACTTGAGTAAT",7,120.74,10.23,-0.6,0.04,2.21,1.06,0,">1 nonsynonymous","F99L Y123V N130K I138L",4
"lib2","SARS-CoV-2","AACTAACTTGTGCAGT",5,24.89,9.38,-1.45,0.19,1.69,1.04,0.02,">1 nonsynonymous","A14P A18S D34L",3
"lib2","SARS-CoV-2","AACTAAGAAATCAGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A22T Y121* S129V",3
"lib2","SARS-CoV-2","AACTAAGACAAAAACG",2,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E L38K S45K F167T T201S",5
"lib2","SARS-CoV-2","AACTAAGACAAGTCTA",10,49.36,6,-4.84,2,3,1.27,0.02,">1 nonsynonymous","I2L G9R P96H Y123F S139L G174L",6
"lib2","SARS-CoV-2","AACTAAGACGCGTAAG",8,184.22,9.06,-1.78,0.06,2.85,1.12,0,">1 nonsynonymous","T3L G166M",2
"lib2","SARS-CoV-2","AACTAAGAGCAAACTT",2,203.25,10.32,-0.52,0.03,2.84,1.04,0,">1 nonsynonymous","K56V T148P",2
"lib2","SARS-CoV-2","AACTAAGAGCTCATGA",3,89.87,9.19,-1.64,0.06,2.61,1.1,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","AACTAAGAGTGCGACA",4,8.53,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L60K D98A K114M G146A V182A",5
"lib2","SARS-CoV-2","AACTAAGATACAAAGA",1,10.77,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","D112M N120A Y165S",3
"lib2","SARS-CoV-2","AACTAAGATAGATTAC",7,8.56,8.47,-2.36,0.43,1.53,1.39,0.04,">1 nonsynonymous","L5Q A14P W106Y",3
"lib2","SARS-CoV-2","AACTAAGATCAAACAA",5,112.92,9.92,-0.91,0.11,2.22,1.04,0,">1 nonsynonymous","G83T D98A",2
"lib2","SARS-CoV-2","AACTAAGCCTGGCTCA",5,41.28,8.68,-2.15,0.17,1.5,1.03,0.02,">1 nonsynonymous","D98R N120F A145V Y178C",4
"lib2","SARS-CoV-2","AACTAAGCGTGACATA",4,33.44,8.16,-2.67,0.19,1.74,1.05,0.02,">1 nonsynonymous","Y35R S113T P149Q",3
"lib2","SARS-CoV-2","AACTAAGCTATTTAAT",1,26.5,7.51,-3.33,0.5,1.5,1.04,0.06,">1 nonsynonymous","T63P N157W",2
"lib2","SARS-CoV-2","AACTAAGGTAAATTGG",13,73.44,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41N G83Y Y93L V180F",4
"lib2","SARS-CoV-2","AACTAAGTAGGACCAC",4,24.14,10.51,-0.32,0.11,3,1,0.01,">1 nonsynonymous","D97L F134A",2
"lib2","SARS-CoV-2","AACTAAGTCCGTTAAG",3,44.19,10.47,-0.37,0.06,2.88,1.1,0,"1 nonsynonymous","N13A",1
"lib2","SARS-CoV-2","AACTAATAAGAGCTTT",3,59.12,10.8,-0.04,0.04,2.93,1.09,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","AACTAATAATATCCCA",12,170.58,10.73,-0.1,0.05,2.98,1.04,0,"1 nonsynonymous","D98E",1
"lib2","SARS-CoV-2","AACTAATACCAGCAAC",2,52.76,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G86T Y175E",2
"lib2","SARS-CoV-2","AACTAATAGCCACTAT",5,11.91,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13V K94L S113V T201L",4
"lib2","SARS-CoV-2","AACTAATAGTCAGTCA",5,35.83,10.89,0.05,0.07,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAATATACCTGAC",8,75.03,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V20R R27S G117T R127I G155S",5
"lib2","SARS-CoV-2","AACTAATCAAACAAAA",8,156.17,10.88,0.04,0.05,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AACTAATCAAGAACAA",3,50.34,10.8,-0.03,0.08,2.89,1.13,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","AACTAATCTGTATCAC",4,13.94,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N13V N118V P149W S184I",4
"lib2","SARS-CoV-2","AACTAATGCAATGCGA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","AACTAATGCAGTACCA",2,27.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5V T15R Y39G P96H Y143V",5
"lib2","SARS-CoV-2","AACTAATGCATCACAG",3,17.8,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F8K R27T C150G",3
"lib2","SARS-CoV-2","AACTAATGTCTACTCA",8,100.24,8.74,-2.1,0.05,3,1.08,0,">1 nonsynonymous","Y119S G174L",2
"lib2","SARS-CoV-2","AACTAATGTGTTGATG",1,39.06,10.88,0.04,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAATTAATCAACA",5,71.95,10.35,-0.49,0.04,2.82,1.05,0,">1 nonsynonymous","S41H L122R K128V N151T S184Y",5
"lib2","SARS-CoV-2","AACTAATTACGCCTGG",1,14.81,6.81,-4.03,0.35,1.91,1.25,0.01,">1 nonsynonymous","A14T K132P G174F",3
"lib2","SARS-CoV-2","AACTAATTTCTATGTC",3,35.51,10.44,-0.39,0.08,2.9,1,0,">1 nonsynonymous","A42L F62G",2
"lib2","SARS-CoV-2","AACTAATTTGCATATG",6,21.76,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","D98W W106L S113M",3
"lib2","SARS-CoV-2","AACTACAAAAGTATGC",3,1.63,NA,NA,NA,NA,NA,NA,"stop","T148*",1
"lib2","SARS-CoV-2","AACTACAAAGGAAGAC",5,32.32,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Q84F P96L G117N F167R",4
"lib2","SARS-CoV-2","AACTACAAATAACTGA",2,32.57,7.72,-3.12,0.26,1.5,1.08,0.02,">1 nonsynonymous","N107L G174H",2
"lib2","SARS-CoV-2","AACTACAAATAGAAAA",3,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57K D90P N157Y P197M",4
"lib2","SARS-CoV-2","AACTACAACTAATGTG",2,22.88,10.78,-0.05,0.06,2.94,1.06,0,">1 nonsynonymous","N1E F160L",2
"lib2","SARS-CoV-2","AACTACAAGCGGGACC",3,21.7,9.83,-1,0.11,2.67,1.12,0,">1 nonsynonymous","T3K Y121V",2
"lib2","SARS-CoV-2","AACTACAATAGACTCT",1,16.93,6.83,-4.01,0.34,1.5,1,0.03,">1 nonsynonymous","D59N N64S Y123P T148S T201M",5
"lib2","SARS-CoV-2","AACTACAATTTTATGC",6,21.76,6.3,-4.54,0.83,1.5,1.29,0.04,">1 nonsynonymous","W106S F167Y",2
"lib2","SARS-CoV-2","AACTACACAAAGTCCT",7,22.82,8.08,-2.76,0.29,1.5,1.12,0.03,">1 nonsynonymous","C6R F44L E135A",3
"lib2","SARS-CoV-2","AACTACACACATTTAT",3,105.8,8.85,-1.99,0.07,1.98,1.1,0,">1 nonsynonymous","L38R F156Y",2
"lib2","SARS-CoV-2","AACTACACACCCATCG",16,3.48,NA,NA,NA,NA,NA,NA,"stop","A33T C61* Y91L",3
"lib2","SARS-CoV-2","AACTACACCAGTCAAC",15,2.93,NA,NA,NA,NA,NA,NA,"stop","N120* F134C Y165I",3
"lib2","SARS-CoV-2","AACTACACCTGGGTTA",7,45.71,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","N40V A89M",2
"lib2","SARS-CoV-2","AACTACAGAAATAAGG",3,53.09,8.34,-2.49,0.1,2.56,1.11,0,">1 nonsynonymous","A42N Y143S V173M",3
"lib2","SARS-CoV-2","AACTACAGAGATCCGC",6,185.64,10.22,-0.61,0.05,2.74,1.02,0,">1 nonsynonymous","G9A S139Y",2
"lib2","SARS-CoV-2","AACTACAGATCGCTAT",3,41.62,9.74,-1.1,0.13,2.34,1.02,0.01,">1 nonsynonymous","A105Y P149C",2
"lib2","SARS-CoV-2","AACTACAGCAATGATT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","L95* L122W",2
"lib2","SARS-CoV-2","AACTACAGGTCTCGCA",1,54.56,10.63,-0.2,0.04,2.95,1.05,0,">1 nonsynonymous","N120R G146A",2
"lib2","SARS-CoV-2","AACTACAGTTTGTGTA",3,43.85,10.45,-0.39,0.03,3,1,0,">1 nonsynonymous","N1G R78L",2
"lib2","SARS-CoV-2","AACTACATACCCATTC",6,46.58,6.75,-4.08,0.49,1.5,1.19,0.03,">1 nonsynonymous","V20R D98P",2
"lib2","SARS-CoV-2","AACTACATACTTGGAA",2,11.27,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I28V P82D K94P F156L G166Q V173F",6
"lib2","SARS-CoV-2","AACTACATGCGAAAAA",3,19.96,6.13,-4.7,1.17,1.76,1.22,0.04,">1 nonsynonymous","L38P Y50H",2
"lib2","SARS-CoV-2","AACTACATGTACGAGC",6,45.41,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V71A D112P",2
"lib2","SARS-CoV-2","AACTACCAAAGGCAAA",3,26.29,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6T S19R A89M N107L L131F V182K",6
"lib2","SARS-CoV-2","AACTACCAAGGGTGGC",10,72.25,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L60G D68E G86P Y119K L131K",5
"lib2","SARS-CoV-2","AACTACCACCTTACGA",7,108.25,9.65,-1.19,0.05,2.09,1.02,0,">1 nonsynonymous","N64S I104G",2
"lib2","SARS-CoV-2","AACTACCACTGCATAG",13,207.77,8.91,-1.93,0.05,2.94,1.09,0,">1 nonsynonymous","K87T Y119A",2
"lib2","SARS-CoV-2","AACTACCCAAGCGTTA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","I28Y T55A G86S P96* W106L G166L",6
"lib2","SARS-CoV-2","AACTACCCACGCGGAT",4,41.66,10.75,-0.09,0.05,2.88,1.11,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","AACTACCCAGCTTCCG",18,4.94,NA,NA,NA,NA,NA,NA,"stop","F17R S113*",2
"lib2","SARS-CoV-2","AACTACCCCTGATTTA",5,106.12,9.11,-1.72,0.08,1.75,1.06,0,">1 nonsynonymous","A22T S29P L60V P149C",4
"lib2","SARS-CoV-2","AACTACCGCATAAGAC",6,144.08,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Q144L P177V",2
"lib2","SARS-CoV-2","AACTACGCACCTATAC",1,1.02,NA,NA,NA,NA,NA,NA,"stop","G83S T100E Y175* T201R",4
"lib2","SARS-CoV-2","AACTACGCTAGACTCA",3,2.46,NA,NA,NA,NA,NA,NA,"stop","T100* I142E",2
"lib2","SARS-CoV-2","AACTACGGAACTAGAG",3,79.15,10.1,-0.74,0.06,2.87,1,0,">1 nonsynonymous","C31E N40Q",2
"lib2","SARS-CoV-2","AACTACGGGAGACAAG",11,89.81,7.18,-3.65,0.29,1.5,1.14,0.02,">1 nonsynonymous","S139R F167L",2
"lib2","SARS-CoV-2","AACTACGTAATAGAAA",1,76.17,10.09,-0.75,0.04,2.59,1.05,0,">1 nonsynonymous","F12M R136L",2
"lib2","SARS-CoV-2","AACTACGTTAAAGCTG",13,414.81,10.08,-0.76,0.04,2.57,1.05,0,"1 nonsynonymous","C102L",1
"lib2","SARS-CoV-2","AACTACGTTCGCAACC",2,25.66,10.46,-0.38,0.08,2.86,1.06,0,">1 nonsynonymous","S45F L60M",2
"lib2","SARS-CoV-2","AACTACTAAAATAAAT",5,135.34,10.07,-0.77,0.04,2.85,1.03,0,">1 nonsynonymous","V37F G86D",2
"lib2","SARS-CoV-2","AACTACTAAGGATATT",1,15.15,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D34F V180G",2
"lib2","SARS-CoV-2","AACTACTATCGTACCG",4,59.61,7.9,-2.94,0.25,1.89,1.1,0.02,">1 nonsynonymous","V37K N120M L162M Y175A",4
"lib2","SARS-CoV-2","AACTACTATGGGTTCT",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A F134I I142V K198P",4
"lib2","SARS-CoV-2","AACTACTATTCATTTT",10,109.76,10.66,-0.18,0.04,2.93,1.06,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","AACTACTCAGGACTAC",3,126.81,10.71,-0.13,0.04,2.94,1.06,0,"1 nonsynonymous","K114N",1
"lib2","SARS-CoV-2","AACTACTCGTGCATGA",16,227.35,10.78,-0.06,0.04,2.95,1.07,0,"1 nonsynonymous","L188W",1
"lib2","SARS-CoV-2","AACTACTGACTAGTCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32N R136E T170S",3
"lib2","SARS-CoV-2","AACTACTGACTTTGAA",2,15.15,8.12,-2.72,0.43,1.55,1.18,0.07,">1 nonsynonymous","N24V N118K F126L F156S K199W",5
"lib2","SARS-CoV-2","AACTACTGTGGGATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","T63P G86V D112T T193Y V194G K199*",6
"lib2","SARS-CoV-2","AACTACTTAGCAATAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AACTACTTCATAAGTT",8,25.65,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","C49Y G74I K87R T100S K128M E135G",6
"lib2","SARS-CoV-2","AACTACTTCTGCGCCT",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131W G196A",2
"lib2","SARS-CoV-2","AACTAGAACCCCAGGA",6,75.44,9.83,-1.01,0.06,2.56,1.1,0,">1 nonsynonymous","A14L A33T I142L T201N",4
"lib2","SARS-CoV-2","AACTAGAACCGCCTAT",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16H R78Y",2
"lib2","SARS-CoV-2","AACTAGAACGAGCTGG",7,63.98,10.83,0,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAGAAGACATAGG",16,167.46,9.2,-1.63,0.08,1.65,1.08,0,">1 nonsynonymous","F99V E141V",2
"lib2","SARS-CoV-2","AACTAGAATAAAACTG",6,13.66,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D98R S139V G155I",3
"lib2","SARS-CoV-2","AACTAGAATGGCAACT",5,0,NA,NA,NA,NA,NA,NA,"stop","I2* D98H T170S",3
"lib2","SARS-CoV-2","AACTAGAATTTCGTTT",9,32.21,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35N V71S V77G Y119A E135W K199R",6
"lib2","SARS-CoV-2","AACTAGACAGGACATA",2,11.8,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y39E T100V D112T N157K",4
"lib2","SARS-CoV-2","AACTAGACCACAAGTT",2,17.15,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","G51V F70P T100I D137L G155N",5
"lib2","SARS-CoV-2","AACTAGAGCAGCATAA",4,2.66,NA,NA,NA,NA,NA,NA,"stop","T63D V77* N92S Y178M",4
"lib2","SARS-CoV-2","AACTAGAGGGAACGAA",2,20.98,10.31,-0.53,0.21,2.35,1.12,0.02,">1 nonsynonymous","D98L E135S",2
"lib2","SARS-CoV-2","AACTAGATACGTGTAA",6,34.44,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","T55C I88N Y119H S139C P161S",5
"lib2","SARS-CoV-2","AACTAGATATCACCAG",1,37.41,10.18,-0.66,0.08,2.77,1.06,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","AACTAGATTTGAATAT",2,9.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y21R R27N V37Q K94W W106G S129F",6
"lib2","SARS-CoV-2","AACTAGATTTGCTTGA",5,70.58,10.52,-0.31,0.06,2.89,1.09,0,">1 nonsynonymous","A42Q A81T",2
"lib2","SARS-CoV-2","AACTAGCAAGACTACA",2,7.12,10.66,-0.18,0.08,2.91,1.11,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","AACTAGCAGCCAAGGA",3,13.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8L A81V D112I",3
"lib2","SARS-CoV-2","AACTAGCAGCCGTTTA",16,75.77,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12D D97Y R127L",3
"lib2","SARS-CoV-2","AACTAGCAGTGTCGAT",3,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8E A33P K132C",3
"lib2","SARS-CoV-2","AACTAGCCACGTAATG",3,19.44,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y35Q Y50A L60I I88R G101D K114R",6
"lib2","SARS-CoV-2","AACTAGCCAGAATAAA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","R16* C102R I142R E186I",4
"lib2","SARS-CoV-2","AACTAGCCGTGAATGG",2,9.98,10.52,-0.32,0.15,2.72,1.28,0.01,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AACTAGCGGGCACCGT",3,2.12,NA,NA,NA,NA,NA,NA,"stop","Q84I F99R T201*",3
"lib2","SARS-CoV-2","AACTAGCGTGTTAAAA",5,18.81,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","V20T Y91G P96L P197S",4
"lib2","SARS-CoV-2","AACTAGGAAAAGCTAG",3,13.22,10.84,0.01,0.21,2.52,1.14,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACTAGGAATAAAGGA",6,31.15,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N1H G101D F167L",3
"lib2","SARS-CoV-2","AACTAGGAATAGCATA",4,5.01,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3G S41Q C49S",3
"lib2","SARS-CoV-2","AACTAGGAATCTTTGT",11,161.37,10.22,-0.62,0.02,2.96,1.05,0,">1 nonsynonymous","T55P G174K",2
"lib2","SARS-CoV-2","AACTAGGAATTTGGGT",17,211.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64K P82D D90Y",3
"lib2","SARS-CoV-2","AACTAGGACGTATAAA",2,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L D59F D68T V173I",4
"lib2","SARS-CoV-2","AACTAGGATTAAAAGT",4,38.86,10.55,-0.28,0.09,2.9,1.13,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","AACTAGGCTGAACAAT",17,155.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N24R L38P G86L V153G",4
"lib2","SARS-CoV-2","AACTAGGTATGGGCAA",2,39.31,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R127G G146P",2
"lib2","SARS-CoV-2","AACTAGGTTACGCTAC",5,39.95,8.9,-1.94,0.17,1.94,1.18,0.01,">1 nonsynonymous","S41Q G86N",2
"lib2","SARS-CoV-2","AACTAGGTTGGCTTTT",1,34.94,10.24,-0.6,0.09,2.96,1,0,">1 nonsynonymous","L5H L122S G155S G174D",4
"lib2","SARS-CoV-2","AACTAGTACAACTATC",3,24.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5Y G101T Y175V",3
"lib2","SARS-CoV-2","AACTAGTACGGAAATT",19,265.21,10.86,0.03,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTAGTCCATTAGGC",1,3.67,NA,NA,NA,NA,NA,NA,"stop","Y66* N107F",2
"lib2","SARS-CoV-2","AACTAGTGAGGTGTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P P54H T55F T85E A89C C102S",6
"lib2","SARS-CoV-2","AACTAGTTACTGGGAT",2,1.78,NA,NA,NA,NA,NA,NA,"stop","C31F S45F S69*",3
"lib2","SARS-CoV-2","AACTATAAAACAAGCA",4,23.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R V77R Y175F",3
"lib2","SARS-CoV-2","AACTATAAACGAAAAC",2,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G S113C",2
"lib2","SARS-CoV-2","AACTATAAATATGATA",4,7.61,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A42K T100P A145C L162W",4
"lib2","SARS-CoV-2","AACTATAAATGAAAAA",3,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N C61P D90R N171L",4
"lib2","SARS-CoV-2","AACTATAACACACAGG",1,42.23,10.44,-0.39,0.07,2.94,1.08,0,">1 nonsynonymous","S41P K198C",2
"lib2","SARS-CoV-2","AACTATAACGTACGCG",1,0.94,NA,NA,NA,NA,NA,NA,"stop","Y39D F99* S129Q",3
"lib2","SARS-CoV-2","AACTATAACTAATACA",8,97.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2R N107S Y175I",3
"lib2","SARS-CoV-2","AACTATAACTAGATTC",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36P G152V",2
"lib2","SARS-CoV-2","AACTATAAGCGATGTA",3,25.54,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y93K P161V T201V",3
"lib2","SARS-CoV-2","AACTATAATAAAATGA",9,38.52,6.38,-4.46,0.62,1.5,1.19,0.04,">1 nonsynonymous","C61D P96G S113K Y119I N171A T201Q",6
"lib2","SARS-CoV-2","AACTATAATGCCCTTG",9,45.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91S F99Q G146Y",3
"lib2","SARS-CoV-2","AACTATACACGCCTGG",6,103.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P96M Y123T C150R T201D",4
"lib2","SARS-CoV-2","AACTATACATTACCAA",5,110.25,10.61,-0.22,0.03,2.98,1.03,0,"1 nonsynonymous","T15Q",1
"lib2","SARS-CoV-2","AACTATACCAAAGATA",10,31.39,6.86,-3.97,0.34,1.5,1.16,0.03,">1 nonsynonymous","A42S S53G A105L",3
"lib2","SARS-CoV-2","AACTATACCAAATCCC",3,16.35,9.57,-1.27,0.13,2.03,1.06,0.01,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","AACTATACCTCATACA",2,5.28,9.77,-1.06,0.22,2.21,1,0.02,">1 nonsynonymous","A33L C49S",2
"lib2","SARS-CoV-2","AACTATACGAGAAAAT",5,43.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6M Y50C D75I S113L S139H",5
"lib2","SARS-CoV-2","AACTATACGCCATAAC",3,8.59,6.33,-4.5,0.54,1.98,1.14,0.01,">1 nonsynonymous","A105D F126S G152S",3
"lib2","SARS-CoV-2","AACTATACGGGAATAC",8,33.1,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37W N120Y R136G N157P",4
"lib2","SARS-CoV-2","AACTATACTCCTTTGT",5,73.89,8.05,-2.79,0.15,2.06,1.12,0.01,">1 nonsynonymous","P96S V115S K132L G166L",4
"lib2","SARS-CoV-2","AACTATAGAACCCATT",2,26.18,10.85,0.01,0.05,3,1,0,"1 nonsynonymous","T63D",1
"lib2","SARS-CoV-2","AACTATAGAAGGATCA",2,22.76,10.75,-0.09,0.08,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTATAGAATGCTAA",1,6.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S F70Y K94L",3
"lib2","SARS-CoV-2","AACTATAGGGGCAATT",1,30.44,10.1,-0.74,0.09,2.55,1.08,0,">1 nonsynonymous","V37N R136A",2
"lib2","SARS-CoV-2","AACTATATACTCCTAC",12,95.04,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L57F Y93F V115D G152I Y178F V182F K198A",7
"lib2","SARS-CoV-2","AACTATATAGACATTT",9,95.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8V Y66M T85P C158I",4
"lib2","SARS-CoV-2","AACTATATATCAATAT",7,44.77,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","E10H C49L K87L W106L",4
"lib2","SARS-CoV-2","AACTATATCGTACTTA",6,22.42,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S43L Q79P",2
"lib2","SARS-CoV-2","AACTATATGCAATTTT",4,45.4,9.95,-0.89,0.1,2.13,1.04,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","AACTATATGCGATGAG",1,8.25,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8V V77E",2
"lib2","SARS-CoV-2","AACTATATTAGATTAC",3,30.68,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","G86I Q144R N171D",3
"lib2","SARS-CoV-2","AACTATATTCATGCAG",28,288.91,9.52,-1.32,0.06,2.43,1.05,0,">1 nonsynonymous","I2P A22E N40P C61S G116M",5
"lib2","SARS-CoV-2","AACTATCAAAATATAT",6,24.1,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","S113W T140Y G174M",3
"lib2","SARS-CoV-2","AACTATCAAAGCACTA",3,19.4,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D34I T55P D68E I138K P161S",5
"lib2","SARS-CoV-2","AACTATCAATATACAT",3,9.84,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","T55V L60R A89G E135G Y143S",5
"lib2","SARS-CoV-2","AACTATCACATTTAAA",9,81.16,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D59I G83C V103N K114G K198V",5
"lib2","SARS-CoV-2","AACTATCACTGCAGTG",2,49.24,10.88,0.05,0.05,2.93,1.08,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","AACTATCAGCTTGGTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","C6D F99C I104*",3
"lib2","SARS-CoV-2","AACTATCAGGGCTAAC",2,24.9,10.85,0.01,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTATCATAAATTAG",5,0.21,NA,NA,NA,NA,NA,NA,"stop","C49L T148* Y178*",3
"lib2","SARS-CoV-2","AACTATCATGAGTTTA",1,1.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","AACTATCCAACTTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100N Y119I",2
"lib2","SARS-CoV-2","AACTATCCACATTTCA",6,48.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G101C N107K",2
"lib2","SARS-CoV-2","AACTATCCCCACACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","G83K V103* L122I Y175F",4
"lib2","SARS-CoV-2","AACTATCCTAATTACT",18,307.59,10.3,-0.54,0.02,2.87,1.03,0,">1 nonsynonymous","D34G A42G",2
"lib2","SARS-CoV-2","AACTATCGAACATATA",11,170.11,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A81Y A145N V153Q",3
"lib2","SARS-CoV-2","AACTATCTACAAAATT",1,77.31,10.26,-0.58,0.04,2.96,1.02,0,">1 nonsynonymous","P7L V77L Y143F",3
"lib2","SARS-CoV-2","AACTATCTACAGGCCG",9,131.09,8.73,-2.11,0.08,2.95,1.09,0,">1 nonsynonymous","Y143I Y159H",2
"lib2","SARS-CoV-2","AACTATCTGACTTTAA",1,15.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G N107T K114I N120Q",4
"lib2","SARS-CoV-2","AACTATCTGAGGCACC",3,2.01,NA,NA,NA,NA,NA,NA,"stop","F70V S108* N120K",3
"lib2","SARS-CoV-2","AACTATCTTAGGTATA",6,179.66,7.43,-3.41,0.11,2.08,1.12,0,">1 nonsynonymous","V153A C158N T201F",3
"lib2","SARS-CoV-2","AACTATGAAACATGAG",9,156,10.59,-0.24,0.04,2.9,1.09,0,">1 nonsynonymous","E10N V37K K56R",3
"lib2","SARS-CoV-2","AACTATGAAGCAGTTT",1,21.4,10.01,-0.82,0.1,2.67,1,0,">1 nonsynonymous","F17I S139T",2
"lib2","SARS-CoV-2","AACTATGATCTATTTA",2,6.39,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N40P L60P L95Q V115G G146Y",5
"lib2","SARS-CoV-2","AACTATGCACTAAAAA",2,9.97,6.32,-4.52,0.13,1.5,1,0,">1 nonsynonymous","I2F I72K",2
"lib2","SARS-CoV-2","AACTATGCCAAAAAGG",1,38.04,10.75,-0.09,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTATGCCAATACAA",7,98.45,9.27,-1.56,0.05,2.93,1.08,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","AACTATGGATTAATTT",4,54.1,9.66,-1.18,0.11,2.33,1.01,0.01,">1 nonsynonymous","Y35R G83L",2
"lib2","SARS-CoV-2","AACTATGGCCGAGAAT",4,24.12,NA,NA,NA,NA,NA,0.26,"1 nonsynonymous","Y93S",1
"lib2","SARS-CoV-2","AACTATGGCGCGTACA",4,60.13,9.55,-1.28,0.12,1.87,1.1,0.01,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","AACTATGGTCGACAGC",9,66.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P82L N107T G166N",3
"lib2","SARS-CoV-2","AACTATGTATACTAGA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","F47L L57M C61Q F70C T85I C158F Y178*",7
"lib2","SARS-CoV-2","AACTATGTTCAAACGG",4,63.43,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I28W F160V G172Q",3
"lib2","SARS-CoV-2","AACTATGTTGTTAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76R T85D",2
"lib2","SARS-CoV-2","AACTATTAAAATAGCT",2,74.66,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T55H L95T N120L G172K",4
"lib2","SARS-CoV-2","AACTATTAAAGAATAA",3,43.53,9.05,-1.78,0.07,2.95,1.04,0,">1 nonsynonymous","D75N T170L",2
"lib2","SARS-CoV-2","AACTATTAAATCGAAG",19,197.91,9.92,-0.92,0.05,2.14,1.04,0,">1 nonsynonymous","T3G P96R",2
"lib2","SARS-CoV-2","AACTATTACAATCCCA",10,128.4,10.78,-0.06,0.02,2.87,1.15,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","AACTATTACTACGGAT",5,2.94,NA,NA,NA,NA,NA,NA,"stop","K87A I104V S108P P197*",4
"lib2","SARS-CoV-2","AACTATTAGAAAGGTG",5,77.96,10.71,-0.13,0.05,2.89,1.12,0,">1 nonsynonymous","V32R F62I D98T Y178H",4
"lib2","SARS-CoV-2","AACTATTAGGTCTAAG",5,73.83,10.8,-0.04,0.03,2.93,1.09,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","AACTATTATGGAAAAG",6,25.4,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R73K G83S Y93P R124C L131M",5
"lib2","SARS-CoV-2","AACTATTATTAACAAA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib2","SARS-CoV-2","AACTATTCAAAGTTAA",7,63.23,10.86,0.03,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTATTCCGCAGTTG",6,36.4,8.09,-2.74,0.37,1.5,1,0.05,">1 nonsynonymous","A18W A33T R127H",3
"lib2","SARS-CoV-2","AACTATTCGCTACAAT",2,99.37,10.71,-0.13,0.03,2.97,1.03,0,">1 nonsynonymous","P54L A190C",2
"lib2","SARS-CoV-2","AACTATTCTAAAATAC",7,50.52,9.34,-1.49,0.06,2.06,1.06,0,">1 nonsynonymous","G9L Y91S",2
"lib2","SARS-CoV-2","AACTATTGAATACGTA",5,34.09,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44Y S69I G101C",3
"lib2","SARS-CoV-2","AACTATTGAGTTGAAT",1,39.69,10.88,0.05,0.06,2.99,1.04,0,"1 nonsynonymous","K199Q",1
"lib2","SARS-CoV-2","AACTATTGTTTGCCAG",4,39.14,10.89,0.06,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTATTTAACATAGA",9,99.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35H Y123D",2
"lib2","SARS-CoV-2","AACTATTTAACTATCC",2,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","AACTATTTAAGGCATA",14,57.72,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R25E C49Y N110P",3
"lib2","SARS-CoV-2","AACTATTTAAGGGGTT",6,69.06,10.82,-0.02,0.07,2.91,1.13,0,"1 nonsynonymous","S139T",1
"lib2","SARS-CoV-2","AACTATTTAATTAGTA",7,76.3,9.57,-1.26,0.11,2.44,1.09,0.01,">1 nonsynonymous","T3V S45A L122A N130T Y143L",5
"lib2","SARS-CoV-2","AACTATTTTTTTACAT",4,42.26,10.46,-0.37,0.05,2.83,1.06,0,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","AACTCAAAAAAATTAG",5,21.25,6.58,-4.25,0.32,1.5,1.1,0.01,">1 nonsynonymous","T85V R136L F167H K199T",4
"lib2","SARS-CoV-2","AACTCAAAACAAGGAC",1,27.49,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K87I L95C Y119W P177Q",4
"lib2","SARS-CoV-2","AACTCAAACCAGACCA",10,212.34,9.63,-1.21,0.05,2.67,1.07,0,">1 nonsynonymous","K94R G152P K198T",3
"lib2","SARS-CoV-2","AACTCAAATAACTAAA",7,32.54,7.08,-3.76,0.51,1.5,1.05,0.07,">1 nonsynonymous","Y93D G101A D137E K198S",4
"lib2","SARS-CoV-2","AACTCAAATAGATTTA",2,24.43,8.09,-2.74,0.17,2.28,1.01,0.01,">1 nonsynonymous","L5P C150S",2
"lib2","SARS-CoV-2","AACTCAAATTTTCGCC",1,17.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28T F47S",2
"lib2","SARS-CoV-2","AACTCAACACCTTAGT",1,19.52,9.9,-0.94,0.17,2.2,1.08,0.01,">1 nonsynonymous","I2N K48G",2
"lib2","SARS-CoV-2","AACTCAACACTACATA",20,144.16,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D68E Y93P D137A G146Y E154F N171S",6
"lib2","SARS-CoV-2","AACTCAACAGGGGACC",1,34.18,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10G T15E T63V D98P S184K",5
"lib2","SARS-CoV-2","AACTCAACGGAAACTG",4,23.84,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V20Y K26L T55H S108M L122K D137R",6
"lib2","SARS-CoV-2","AACTCAACTCACACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27I D98Y S129W T170L",4
"lib2","SARS-CoV-2","AACTCAAGCCGGCTGA",14,136.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1Y L60P V115A Y159W G166L",5
"lib2","SARS-CoV-2","AACTCAAGGCTTCACA",1,28.99,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","D112E S164I T170G",3
"lib2","SARS-CoV-2","AACTCAAGGTCACTAA",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D W106E F134G Q176I",4
"lib2","SARS-CoV-2","AACTCAAGTGCAAACA",4,39.77,10,-0.83,0.12,2.27,1.02,0.01,">1 nonsynonymous","F47L F62L S129L",3
"lib2","SARS-CoV-2","AACTCAATAAACTCCA",7,34.25,9.05,-1.78,0.22,1.5,1.09,0.02,"1 nonsynonymous","W23N",1
"lib2","SARS-CoV-2","AACTCAATAGTTGAAG",4,9.44,6.78,-4.06,0.3,1.98,1.19,0.02,">1 nonsynonymous","C6N F99L K114S",3
"lib2","SARS-CoV-2","AACTCAATCAGGGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* A42S Y66S I88K D97S F156L",6
"lib2","SARS-CoV-2","AACTCAATCCTGGAGA",7,104.71,10.06,-0.77,0.04,2.63,1.01,0,">1 nonsynonymous","F99L K198T",2
"lib2","SARS-CoV-2","AACTCAATGAAAGTCA",2,39.2,8.2,-2.64,0.21,1.54,1.14,0.02,">1 nonsynonymous","E10K N107L",2
"lib2","SARS-CoV-2","AACTCAATTATAAAAA",5,133.3,9.83,-1,0.03,2.96,1.07,0,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","AACTCACAAGGAAAAA",1,10.36,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","G86L R127L",2
"lib2","SARS-CoV-2","AACTCACAAGGGTTAG",3,20.02,10.86,0.03,0.07,2.9,1.03,0,">1 nonsynonymous","Y91F E141N",2
"lib2","SARS-CoV-2","AACTCACACGGGGCAT",4,27.91,10.23,-0.61,0.09,2.86,1.09,0,">1 nonsynonymous","K87T W106M",2
"lib2","SARS-CoV-2","AACTCACACTCATAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12I L38R Y50* D59S N171S",5
"lib2","SARS-CoV-2","AACTCACATATAATAA",4,165.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32C G86E K114R R136S G166V P177V",6
"lib2","SARS-CoV-2","AACTCACATATACGAG",3,17.37,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L38E L57V R124M",3
"lib2","SARS-CoV-2","AACTCACCAACTAATC",4,12.4,6,-4.84,2,3,1.04,0,">1 nonsynonymous","L57I D98Y V103R N151L",4
"lib2","SARS-CoV-2","AACTCACGCAATGATA",9,44.92,10.85,0.02,0.06,3,1.03,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","AACTCACGCGGTATAA",8,164.97,9.83,-1.01,0.06,2.04,1.07,0,"1 nonsynonymous","K94F",1
"lib2","SARS-CoV-2","AACTCACTATCCAACA",2,21.36,6.03,-4.81,0.65,1.5,1.04,0.01,">1 nonsynonymous","Y93L S129R V180A C195Y",4
"lib2","SARS-CoV-2","AACTCACTCAACAAAT",6,130.86,10.76,-0.07,0.02,2.93,1.06,0,">1 nonsynonymous","I2V G196D",2
"lib2","SARS-CoV-2","AACTCACTCCACCAAA",3,40.72,10.19,-0.65,0.07,2.89,1.09,0,"1 nonsynonymous","Y91H",1
"lib2","SARS-CoV-2","AACTCAGAACATGCGT",1,7.5,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","W23T T46K D59L D98M",4
"lib2","SARS-CoV-2","AACTCAGACTCGGCGA",1,14.4,8.92,-1.91,0.24,1.67,1.02,0.03,">1 nonsynonymous","N13H S45T Q84S R136L",4
"lib2","SARS-CoV-2","AACTCAGCACGATACC",3,82.51,8.1,-2.73,0.17,1.61,1.08,0.01,">1 nonsynonymous","N120P I138T G166P",3
"lib2","SARS-CoV-2","AACTCAGCTTTCCTTC",4,0,NA,NA,NA,NA,NA,NA,"stop","T15* S43Y C49S T63M I72D",5
"lib2","SARS-CoV-2","AACTCAGGAACACGGC",1,23.14,10.52,-0.32,0.08,2.87,1.06,0,"1 nonsynonymous","A67T",1
"lib2","SARS-CoV-2","AACTCAGGTGAAATAA",1,8.78,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N30E Y123K C150F Q168T",4
"lib2","SARS-CoV-2","AACTCAGTAAGTAAAT",10,67.67,10.45,-0.39,0.03,2.87,1.03,0,">1 nonsynonymous","G9S E186F",2
"lib2","SARS-CoV-2","AACTCATAATTAGAAA",10,4.79,NA,NA,NA,NA,NA,NA,"stop","Y35P P96* G146Y",3
"lib2","SARS-CoV-2","AACTCATACCTGGACA",9,129.8,8.64,-2.2,0.06,2.34,1.12,0,">1 nonsynonymous","C6L N118A",2
"lib2","SARS-CoV-2","AACTCATACGGACAAA",1,64.15,10.44,-0.39,0.04,2.96,1.04,0,">1 nonsynonymous","Y39L S45T A105G",3
"lib2","SARS-CoV-2","AACTCATAGACTGCTC",2,58.41,10.18,-0.66,0.03,2.89,1.11,0,">1 nonsynonymous","C6T F12L",2
"lib2","SARS-CoV-2","AACTCATAGATAAGAC",1,13.64,6,-4.84,2,1.5,1.04,0.03,">1 nonsynonymous","K26P N107G T148G V180I",4
"lib2","SARS-CoV-2","AACTCATCCCGCAGTC",7,108.88,9.91,-0.92,0.03,2.97,1.05,0,">1 nonsynonymous","A33P F156S T193N",3
"lib2","SARS-CoV-2","AACTCATGAATTAGCA",3,42.99,6.06,-4.77,0.8,1.5,1.07,0.01,">1 nonsynonymous","N4F R16S W23A G101C V103C F126D",6
"lib2","SARS-CoV-2","AACTCATGGATACGGA",9,117.05,10.79,-0.04,0.05,2.92,1.05,0,">1 nonsynonymous","G9Q K114M",2
"lib2","SARS-CoV-2","AACTCCAAAACCTTGG",5,34.78,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C61R V77T D90I Y123K Y143I F156H",6
"lib2","SARS-CoV-2","AACTCCAAACGGTTGT",4,22.68,9.12,-1.72,0.2,1.61,1.13,0.03,"1 nonsynonymous","C49A",1
"lib2","SARS-CoV-2","AACTCCAAATTCATGA",4,22.87,6,-4.84,2,2.15,1.13,0.01,">1 nonsynonymous","C61K P96F W106L",3
"lib2","SARS-CoV-2","AACTCCAACAAATATG",4,66.61,10.77,-0.07,0.05,2.9,1.11,0,">1 nonsynonymous","D90Q E141T",2
"lib2","SARS-CoV-2","AACTCCAACAACAAGG",6,28.32,6,-4.84,1.59,1.5,1.18,0.01,">1 nonsynonymous","E10S F44I D68V N92Q E135V Y159V Q168F R179V",8
"lib2","SARS-CoV-2","AACTCCAAGCCACAAA",1,53.2,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y39F K94L Q176R A190L",4
"lib2","SARS-CoV-2","AACTCCAAGGCCGATT",13,182.8,9.98,-0.86,0.04,2.75,1.05,0,">1 nonsynonymous","N64Q L122Q R179K",3
"lib2","SARS-CoV-2","AACTCCACCCGTGGCT",7,153.63,10.66,-0.18,0.04,2.98,1.04,0,"1 nonsynonymous","L57I",1
"lib2","SARS-CoV-2","AACTCCACCGCTCATA",6,39.94,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6D F99E",2
"lib2","SARS-CoV-2","AACTCCACCTCACAAA",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L I142P",2
"lib2","SARS-CoV-2","AACTCCACCTCTTCAC",1,11.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q V37M D59C G146P",4
"lib2","SARS-CoV-2","AACTCCACTACATTTC",2,20.48,11.04,0.21,0.07,2.99,1,0,"1 nonsynonymous","V32I",1
"lib2","SARS-CoV-2","AACTCCATACAACTGC",4,157.42,10.7,-0.14,0.03,2.94,1.08,0,"1 nonsynonymous","W23F",1
"lib2","SARS-CoV-2","AACTCCATCTAATCAA",11,165.58,6.09,-4.75,0.72,1.5,1.16,0.01,">1 nonsynonymous","G101I G146T P161N G172V",4
"lib2","SARS-CoV-2","AACTCCATGAGACTAA",3,31.38,10.77,-0.07,0.05,3,1.02,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","AACTCCATTATACAAG",7,2.99,NA,NA,NA,NA,NA,NA,"stop","F8* D97F",2
"lib2","SARS-CoV-2","AACTCCCATCCGACTA",10,45.03,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C49D A145S F156V F167L",4
"lib2","SARS-CoV-2","AACTCCCATTACACTA",10,92.57,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N1M V37T N92V P161C",4
"lib2","SARS-CoV-2","AACTCCCATTTAGATC",11,31.92,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S69D V77N Q84V L122A",4
"lib2","SARS-CoV-2","AACTCCCCTTTTGATG",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83H C158W",2
"lib2","SARS-CoV-2","AACTCCCGACAAAACA",4,73.94,10.81,-0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTCCCGTGAATAAT",4,98.04,10.5,-0.34,0.03,2.92,1.04,0,">1 nonsynonymous","T15E K48S",2
"lib2","SARS-CoV-2","AACTCCCTAAATTGGA",5,29.5,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","D68W F126L G146L G152Q K198L",5
"lib2","SARS-CoV-2","AACTCCCTAATCATTA",1,65.58,10.34,-0.5,0.05,2.93,1.08,0,">1 nonsynonymous","I72L Y175F",2
"lib2","SARS-CoV-2","AACTCCCTACGAAGAT",3,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30H C61K E76R S129G",4
"lib2","SARS-CoV-2","AACTCCGAGCTATCGA",5,40.66,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L5R S19I N107L A145E",4
"lib2","SARS-CoV-2","AACTCCGGCAAGATAC",2,37.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T T55G F70K I142K",4
"lib2","SARS-CoV-2","AACTCCTACAGAAGTT",2,6.8,10.92,0.08,0.15,3,1.01,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","AACTCCTAGCTGACAC",17,1.96,NA,NA,NA,NA,NA,NA,"stop","N58* D98F I104G Y123C L131G",5
"lib2","SARS-CoV-2","AACTCCTATCCGTGCA",6,77.12,6.01,-4.82,0.74,1.5,1.1,0.01,">1 nonsynonymous","A14G V77M T100M N107G L125V T140I P177I",7
"lib2","SARS-CoV-2","AACTCCTCCGGGTAAG",2,17.46,10.8,-0.03,0.09,2.93,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTCCTCTACACACA",2,35.57,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89N N118T Y143E",3
"lib2","SARS-CoV-2","AACTCCTTATTTCTTT",3,10.23,9.6,-1.23,0.2,1.91,1,0.03,">1 nonsynonymous","L5R I88A",2
"lib2","SARS-CoV-2","AACTCGAAAATACGAC",2,18.07,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","G9C T55S G146L",3
"lib2","SARS-CoV-2","AACTCGAACACAAACG",3,11.05,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","W23A D137I",2
"lib2","SARS-CoV-2","AACTCGAAGGTTCTAT",7,72.24,9.88,-0.95,0.08,2.09,1.07,0,">1 nonsynonymous","T15K E135V P149S",3
"lib2","SARS-CoV-2","AACTCGACACCTCCTT",3,68.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6A D59N Y121G T201N",4
"lib2","SARS-CoV-2","AACTCGACCGGCGGCA",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M F47V P82S G101R K128Y",5
"lib2","SARS-CoV-2","AACTCGAGTCAAATAG",4,1.37,NA,NA,NA,NA,NA,NA,"stop","R27N Y35L V77* G83W K128H",5
"lib2","SARS-CoV-2","AACTCGATCAAAGAAG",4,0.28,NA,NA,NA,NA,NA,NA,"stop","V32* N120L D137N F160Y P169A",5
"lib2","SARS-CoV-2","AACTCGATTCTAAACA",8,53.33,7.25,-3.58,0.21,1.5,1.16,0.01,">1 nonsynonymous","F17D G152Q",2
"lib2","SARS-CoV-2","AACTCGCAATGAACCA",16,93.56,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C49T D68K",2
"lib2","SARS-CoV-2","AACTCGCACGGACGCA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92M K114R E141Q C158M",4
"lib2","SARS-CoV-2","AACTCGCATTAATTCT",6,0.53,NA,NA,NA,NA,NA,NA,"stop","P7K Y50I A67P E154I S164*",5
"lib2","SARS-CoV-2","AACTCGCTAAACTCCA",1,40.05,10.35,-0.49,0.03,3,1,0,">1 nonsynonymous","T85R P133F",2
"lib2","SARS-CoV-2","AACTCGCTAACTGGAC",19,348.65,10.36,-0.47,0.04,2.9,1.08,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","AACTCGCTTTATGAGA",3,33.68,9.56,-1.27,0.1,2.1,1.04,0,">1 nonsynonymous","E10W A81E",2
"lib2","SARS-CoV-2","AACTCGGGAAGAGACG",7,54.64,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28K Y93I L162S Y175C",4
"lib2","SARS-CoV-2","AACTCGGTGCCCAAAT",6,95.17,10.75,-0.09,0.05,2.89,1.1,0,">1 nonsynonymous","I2N V37T T63H P197W",4
"lib2","SARS-CoV-2","AACTCGTAACATATCC",4,43.52,10.96,0.12,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTCGTAATAACTCA",9,69.88,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S36F P54K G83I A89C N120G S129V I142L",7
"lib2","SARS-CoV-2","AACTCGTCAAGACACG",13,253.3,10.85,0.02,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AACTCGTCACTAGGCC",4,118.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N109T Y175A T201R",3
"lib2","SARS-CoV-2","AACTCGTTCTGAGGCG",6,84.5,10.32,-0.51,0.04,2.84,1.06,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","AACTCTAAAAATGGAG",2,36.78,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","Y39M G86L N157S",3
"lib2","SARS-CoV-2","AACTCTAAATACACAC",2,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K F99S G152L K199G",4
"lib2","SARS-CoV-2","AACTCTAACCACACCA",2,35.85,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F12V L38G Y91V L122M N157L",5
"lib2","SARS-CoV-2","AACTCTAACGTGTCCA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","V37M Y66G Y119K Q168*",4
"lib2","SARS-CoV-2","AACTCTAACTAGTTAC",4,24.97,10.39,-0.45,0.13,2.65,1.1,0.01,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","AACTCTAAGAAGACGT",3,9.06,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A105L R136T",2
"lib2","SARS-CoV-2","AACTCTAAGTCTACCA",12,259.39,10.26,-0.58,0.03,2.97,1.04,0,">1 nonsynonymous","G83S E154P K198N",3
"lib2","SARS-CoV-2","AACTCTAATAGTAACA",4,12.24,6,-4.84,0.72,3,1.09,0,">1 nonsynonymous","A89H S108P T201L",3
"lib2","SARS-CoV-2","AACTCTAATCTCACAG",7,84.89,9.19,-1.64,0.07,2.01,1.03,0,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","AACTCTACAACTCCCA",3,223.39,10.65,-0.19,0.02,2.91,1.08,0,">1 nonsynonymous","N58G D97A",2
"lib2","SARS-CoV-2","AACTCTAGAAATTCAA",3,46.15,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V11S N64S Q84S Y91P G117R",5
"lib2","SARS-CoV-2","AACTCTAGTCTACATA",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L F99Q",2
"lib2","SARS-CoV-2","AACTCTATAGGGTTCC",4,87.77,10.88,0.04,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTCTATCCGCGAGT",4,89.06,8.39,-2.44,0.14,2.61,1.05,0.01,">1 nonsynonymous","I2T D98V Y175S",3
"lib2","SARS-CoV-2","AACTCTATTAGCACAC",9,55.87,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","A89L K94P",2
"lib2","SARS-CoV-2","AACTCTCCAGGCAGAC",1,21.87,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S41A T46D G86F Y119S",4
"lib2","SARS-CoV-2","AACTCTCCGAAGCGAA",11,140.93,10.46,-0.38,0.05,2.93,1.02,0,">1 nonsynonymous","A18V T140Q",2
"lib2","SARS-CoV-2","AACTCTCCTAAAGACT",5,77.54,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S19T P149S Y175R",3
"lib2","SARS-CoV-2","AACTCTCTCCCGTACA",9,65.97,6,-4.84,0.55,3,1.17,0,">1 nonsynonymous","G51V F62G F167A K198G",4
"lib2","SARS-CoV-2","AACTCTCTTACTGAAG",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N G86R S129R N151L",4
"lib2","SARS-CoV-2","AACTCTCTTGCACAAC",6,63.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10L K87R P96V Y119V",4
"lib2","SARS-CoV-2","AACTCTGCAGCACGAA",1,37.25,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D90E P96K P177T",3
"lib2","SARS-CoV-2","AACTCTGTCAATGAGT",3,9.21,6,-4.84,2,1.5,1.34,0.08,">1 nonsynonymous","A42W V71S C102V T201R",4
"lib2","SARS-CoV-2","AACTCTGTCATAACCC",10,7.09,NA,NA,NA,NA,NA,NA,"stop","N110W F156* Y175M",3
"lib2","SARS-CoV-2","AACTCTGTTATACTAT",4,9.16,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G86F L122S Q168S S200A",4
"lib2","SARS-CoV-2","AACTCTTAGACCTATT",2,27.47,6,-4.84,2,3,1.24,0,">1 nonsynonymous","V71M Y119M S139D",3
"lib2","SARS-CoV-2","AACTCTTATATTCTGA",6,0.12,NA,NA,NA,NA,NA,NA,"stop","V115T G155*",2
"lib2","SARS-CoV-2","AACTCTTCATGGAGAC",3,11.02,10,-0.83,0.16,2.08,1,0.01,">1 nonsynonymous","K56R K128P R136E",3
"lib2","SARS-CoV-2","AACTCTTCGGTGAATA",2,24.61,6,-4.84,1.34,1.5,1.27,0.03,">1 nonsynonymous","L95A Y178F",2
"lib2","SARS-CoV-2","AACTCTTCTATGGCAA",1,19.38,7.63,-3.21,0.3,1.5,1.06,0.03,">1 nonsynonymous","P96S S139R E154L Y178N",4
"lib2","SARS-CoV-2","AACTCTTGGCGAAATA",5,55.81,7.93,-2.91,0.11,2.21,1.13,0,">1 nonsynonymous","N24T C158R",2
"lib2","SARS-CoV-2","AACTCTTTAAATAAGG",22,68.16,9.09,-1.74,0.24,1.5,1,0.03,">1 nonsynonymous","F47H K56W D97A",3
"lib2","SARS-CoV-2","AACTCTTTCGGCCGAT",1,32.77,9.28,-1.56,0.12,2.19,1.17,0.01,">1 nonsynonymous","Y91S V115R",2
"lib2","SARS-CoV-2","AACTCTTTTCAAATTC",4,36.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11Y K48I D75E V103T Q176H",5
"lib2","SARS-CoV-2","AACTCTTTTCCTGGTC",7,67.94,10.22,-0.61,0.02,2.97,1.02,0,">1 nonsynonymous","N64E G155C",2
"lib2","SARS-CoV-2","AACTGAAAACAAAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31S G51M T140G A145S G155S L162H V182M",7
"lib2","SARS-CoV-2","AACTGAAACAACGAAC",10,227.19,8.38,-2.46,0.1,2.53,1.1,0,"1 nonsynonymous","Y175V",1
"lib2","SARS-CoV-2","AACTGAAACAGCTGAA",2,2.6,NA,NA,NA,NA,NA,NA,"stop","K87V V103* N120R",3
"lib2","SARS-CoV-2","AACTGAAAGGTGGCAG",1,0.66,NA,NA,NA,NA,NA,NA,"stop","A42Y K87Q Y119*",3
"lib2","SARS-CoV-2","AACTGAACAGAATAAC",3,80.57,10.41,-0.42,0.05,2.88,1.05,0,">1 nonsynonymous","L5R F12M",2
"lib2","SARS-CoV-2","AACTGAACATCCATTA",7,165.63,8.71,-2.12,0.08,1.88,1.11,0,">1 nonsynonymous","G51M R73T",2
"lib2","SARS-CoV-2","AACTGAACGAGTGACG",3,123.23,10.73,-0.1,0.05,2.93,1.09,0,">1 nonsynonymous","A14S L122N",2
"lib2","SARS-CoV-2","AACTGAAGAGGACCCA",2,23.94,6,-4.84,2,3,1.17,0,"1 nonsynonymous","G172M",1
"lib2","SARS-CoV-2","AACTGAAGATTCAATG",6,89.79,6,-4.84,1.84,1.5,1.13,0.01,">1 nonsynonymous","F62H V182L",2
"lib2","SARS-CoV-2","AACTGAAGCACAGAAC",3,1.12,NA,NA,NA,NA,NA,NA,"stop","E135K C195*",2
"lib2","SARS-CoV-2","AACTGAAGCAGTGTCA",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T V52I D98M S139A Q144L",5
"lib2","SARS-CoV-2","AACTGAATAATTTTGA",1,13.64,8.6,-2.23,0.11,2.98,1.03,0.01,">1 nonsynonymous","A14S K56Q K87Y N120F T170R",5
"lib2","SARS-CoV-2","AACTGAATACTCGTTA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","A89* N110A H189N",3
"lib2","SARS-CoV-2","AACTGAATCCGTAGCA",8,187.4,10.29,-0.55,0.02,2.92,1.05,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","AACTGAATTTTCACCT",5,27.95,9.66,-1.18,0.08,1.92,1.04,0,">1 nonsynonymous","D98Q V180L",2
"lib2","SARS-CoV-2","AACTGACAATCTCCTG",3,61.2,8.09,-2.74,0.18,1.5,1.06,0.01,">1 nonsynonymous","A89K P191R",2
"lib2","SARS-CoV-2","AACTGACAGATGCGTT",5,8.44,NA,NA,NA,NA,NA,NA,"stop","Y35* I104N",2
"lib2","SARS-CoV-2","AACTGACAGGATTTCG",1,9.03,6.5,-4.34,0.75,3,1.21,0.01,">1 nonsynonymous","S41I C49K",2
"lib2","SARS-CoV-2","AACTGACCAGAGAAGG",14,96.48,6,-4.84,2,3,1.22,0,">1 nonsynonymous","T3R V20E",2
"lib2","SARS-CoV-2","AACTGACCCTAACTTG",2,32.49,6.14,-4.69,0.52,1.5,1.05,0.01,">1 nonsynonymous","V37T F44I Y123S R127Y",4
"lib2","SARS-CoV-2","AACTGACCTTGACAAA",1,8.09,10.66,-0.17,0.15,2.81,1.23,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","AACTGACGGCGTCCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A P191V",2
"lib2","SARS-CoV-2","AACTGACTAACCTTGG",3,12.15,6,-4.84,2,3,1.02,0,">1 nonsynonymous","S45W I104R",2
"lib2","SARS-CoV-2","AACTGACTCGAAAGGT",6,83.55,9.18,-1.66,0.21,1.52,1.12,0.02,"1 nonsynonymous","R127T",1
"lib2","SARS-CoV-2","AACTGACTGGAATAAA",2,51.64,9.9,-0.94,0.07,2.46,1.03,0,">1 nonsynonymous","A33P P133C",2
"lib2","SARS-CoV-2","AACTGAGAAAATCTCT",2,31.5,10.17,-0.66,0.08,2.6,1.03,0,">1 nonsynonymous","A33R A42W",2
"lib2","SARS-CoV-2","AACTGAGAAAGAGTAG",10,44.31,6.63,-4.2,0.29,1.7,1.22,0.01,">1 nonsynonymous","A81N K94I S147N",3
"lib2","SARS-CoV-2","AACTGAGAGGCGTAGG",14,227.71,10.23,-0.61,0.02,2.86,1.05,0,">1 nonsynonymous","D90M K128M Q168R",3
"lib2","SARS-CoV-2","AACTGAGATCCAGTAT",2,6.36,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","V103M N157C",2
"lib2","SARS-CoV-2","AACTGAGATTAACTCG",2,25.12,8.97,-1.86,0.14,2.6,1.12,0.01,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","AACTGAGGGGCACCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","P82* Y123S",2
"lib2","SARS-CoV-2","AACTGAGGTAAATGAC",5,87.47,9.61,-1.23,0.08,2.11,1.01,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","AACTGAGTATAGAAAT",3,87.32,10.79,-0.05,0.07,2.92,1.11,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","AACTGAGTGAACGAAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","AACTGATAACATAAAA",21,167.72,9.23,-1.6,0.06,1.75,1.08,0,">1 nonsynonymous","G51S Q84L N151T",3
"lib2","SARS-CoV-2","AACTGATAATACAAGT",2,178.07,10.45,-0.39,0.04,2.92,1.03,0,">1 nonsynonymous","S129G Y178V",2
"lib2","SARS-CoV-2","AACTGATAGTTCTAAA",4,18.35,8.49,-2.34,0.17,2.45,1.09,0.01,">1 nonsynonymous","S36G G116F G155W",3
"lib2","SARS-CoV-2","AACTGATATTAATCGT",5,8.94,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","P7L N13I S41F V103N S129C I138S",6
"lib2","SARS-CoV-2","AACTGATCCGTCTGGC",4,71.85,9.76,-1.08,0.06,2.89,1.08,0,">1 nonsynonymous","G9D G146S T170R",3
"lib2","SARS-CoV-2","AACTGATCCTTATGTC",6,0,NA,NA,NA,NA,NA,NA,"stop","R25D G174*",2
"lib2","SARS-CoV-2","AACTGATCGCTGAAAC",5,49.1,10.62,-0.21,0.07,2.9,1,0,"1 nonsynonymous","Y66S",1
"lib2","SARS-CoV-2","AACTGATGAAAGGATC",10,39.84,7.36,-3.47,0.3,1.5,1.19,0.03,">1 nonsynonymous","F8L V52N W106M",3
"lib2","SARS-CoV-2","AACTGATGAGCAAGGT",16,64.42,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","L5R N92Q Y121I",3
"lib2","SARS-CoV-2","AACTGATTGTTAAGGC",5,44.81,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A89D Y143G V173T",3
"lib2","SARS-CoV-2","AACTGCAAAAACCTTG",8,125.17,10.69,-0.14,0.02,2.93,1.07,0,">1 nonsynonymous","I104F I142T",2
"lib2","SARS-CoV-2","AACTGCAAGGCACGAA",14,152.1,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","P7Y V37T F44V G86E G146F V153K",6
"lib2","SARS-CoV-2","AACTGCAATAAACCAT",9,96.71,9.55,-1.29,0.07,2.14,1.03,0,"1 nonsynonymous","F8D",1
"lib2","SARS-CoV-2","AACTGCAATACCGCCA",7,47.15,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S41M D68G R73A G83N C150I",5
"lib2","SARS-CoV-2","AACTGCACAAAGTCCA",4,99.56,8.74,-2.09,0.11,2.13,1.07,0,">1 nonsynonymous","F160K F167L",2
"lib2","SARS-CoV-2","AACTGCACTAGCTGAT",4,21.91,6.05,-4.79,1.16,1.5,1.17,0.03,">1 nonsynonymous","L60I P82L D98F",3
"lib2","SARS-CoV-2","AACTGCAGCCCAGGCG",3,230.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68R D97G G166S",3
"lib2","SARS-CoV-2","AACTGCATAAATCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3P T148* F167L",3
"lib2","SARS-CoV-2","AACTGCATCAAACACA",4,13.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L38S G86V Y175R",3
"lib2","SARS-CoV-2","AACTGCATTATTAAGT",9,88.78,7.95,-2.89,0.16,1.5,1.06,0.01,">1 nonsynonymous","P7K V37K D90G L131F F156I T201S",6
"lib2","SARS-CoV-2","AACTGCCACAAGAAAA",8,84.87,9.79,-1.04,0.06,2.72,1,0,">1 nonsynonymous","L60E G155L S184C",3
"lib2","SARS-CoV-2","AACTGCCCCAACTTTA",1,17.96,10.82,-0.02,0.04,3,1.01,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","AACTGCCGCCTACTAC",5,95.67,9.8,-1.03,0.04,2.86,1.03,0,">1 nonsynonymous","D34L T55P K87T",3
"lib2","SARS-CoV-2","AACTGCCTGCAGTGAA",5,23.7,10.97,0.14,0.07,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGCGCAAATAACC",10,139.16,10.76,-0.07,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGCGTAGACAAGG",8,144.24,10.34,-0.49,0.04,2.89,1.07,0,">1 nonsynonymous","G9H S36L Q144T",3
"lib2","SARS-CoV-2","AACTGCTAAGCGAATG",5,10.73,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D34R C61S K87D G174F",4
"lib2","SARS-CoV-2","AACTGCTAGGACTCCG",4,113.71,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39Q R124H G146M",3
"lib2","SARS-CoV-2","AACTGCTCATGATTCA",2,24.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C49R Y119V E186Y",3
"lib2","SARS-CoV-2","AACTGCTCATTCAAAA",3,189.54,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y121F Y165H Y175R",3
"lib2","SARS-CoV-2","AACTGCTCGGGCGTTG",5,73.29,9.77,-1.06,0.09,2.33,1.04,0,">1 nonsynonymous","E10Y N64L T201M",3
"lib2","SARS-CoV-2","AACTGCTTACACACCA",1,21.88,10.73,-0.11,0.07,2.74,1.24,0,">1 nonsynonymous","V37K S139T",2
"lib2","SARS-CoV-2","AACTGCTTATTATGGG",1,5.55,9.52,-1.32,0.3,1.76,1,0.02,">1 nonsynonymous","G9P A14D K48T S53K E141G",5
"lib2","SARS-CoV-2","AACTGCTTCATCGTCC",4,49.4,10.64,-0.19,0.05,2.86,1.17,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","AACTGGAAAATAATTA",1,9.9,8.52,-2.32,0.4,2.39,1.16,0.01,">1 nonsynonymous","S29L S113R L122K T201H",4
"lib2","SARS-CoV-2","AACTGGAAGAGACGAA",4,60.76,9.75,-1.08,0.06,2.85,1.04,0,">1 nonsynonymous","P54Q K128R Y143L",3
"lib2","SARS-CoV-2","AACTGGAATAAAGACT",5,17.89,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y50S Y121K",2
"lib2","SARS-CoV-2","AACTGGACACACCATA",2,14.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E141L Q176R",2
"lib2","SARS-CoV-2","AACTGGACCCTATCGC",9,177.62,10.86,0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGGAGAACCAAAA",3,25.19,6,-4.84,2,3,1.11,0,">1 nonsynonymous","Y123T I142N T170N",3
"lib2","SARS-CoV-2","AACTGGAGCGTTACCA",2,9.95,NA,NA,NA,NA,NA,NA,"stop","S41T Y91* F99G K114N Y143L",5
"lib2","SARS-CoV-2","AACTGGAGTCAAGGCG",3,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97N D137L F160Y L183T",4
"lib2","SARS-CoV-2","AACTGGATAATTAGCT",3,37.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37K L95D N110S G174R A190T",5
"lib2","SARS-CoV-2","AACTGGATATCGACTG",8,118.28,8.86,-1.97,0.07,2.02,1.09,0,">1 nonsynonymous","E10A N107M",2
"lib2","SARS-CoV-2","AACTGGATTGTATATA",2,23.8,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F44T C61Y A81H Q176V",4
"lib2","SARS-CoV-2","AACTGGCAACAAAGTA",1,59.56,9.03,-1.81,0.03,2.88,1.08,0,">1 nonsynonymous","K48V C61V Y119T L187Q",4
"lib2","SARS-CoV-2","AACTGGCACCCGCCTC",13,83.95,8.3,-2.54,0.2,1.5,1.04,0.02,">1 nonsynonymous","R25N S41T T63V",3
"lib2","SARS-CoV-2","AACTGGCAGAAAGAGG",4,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91I A105E T201W",3
"lib2","SARS-CoV-2","AACTGGCCGCAACGAA",1,45.72,10.87,0.03,0.05,2.98,1.02,0,">1 nonsynonymous","T55A K199R",2
"lib2","SARS-CoV-2","AACTGGCCGCAATATA",4,64.97,9.93,-0.9,0.08,2,1.06,0,"1 nonsynonymous","F99H",1
"lib2","SARS-CoV-2","AACTGGCCTCGCGACA",5,22.55,8.8,-2.03,0.28,1.5,1,0.03,">1 nonsynonymous","G9Q Y35S D90I",3
"lib2","SARS-CoV-2","AACTGGCCTTATTCAA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","N24* Y91I D112V P161L",4
"lib2","SARS-CoV-2","AACTGGCGACCGACTG",2,21.8,10.82,-0.01,0.06,3,1.03,0,"1 nonsynonymous","N58A",1
"lib2","SARS-CoV-2","AACTGGCGATTTAACT",2,31.18,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S113H Y165D",2
"lib2","SARS-CoV-2","AACTGGCGCGATACGA",3,26.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152S L162S",2
"lib2","SARS-CoV-2","AACTGGCGGGGGGTCC",1,22.63,6.21,-4.62,0.94,1.5,1.16,0.03,">1 nonsynonymous","T3L F8S S19K R78V I88R N107L Y121M",7
"lib2","SARS-CoV-2","AACTGGCTACCTGATT",2,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99G I104Y P169Y V181S",4
"lib2","SARS-CoV-2","AACTGGCTTTTAGCCC",17,64.18,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D97T V103Y S139T N171H T201S",5
"lib2","SARS-CoV-2","AACTGGGAACCCCAAA",12,45.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R124N G152I",2
"lib2","SARS-CoV-2","AACTGGGCATTAACAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","S45A G146*",2
"lib2","SARS-CoV-2","AACTGGGGCCTATAAG",4,64.33,10.06,-0.78,0.06,2.55,1.1,0,">1 nonsynonymous","D90H G152H",2
"lib2","SARS-CoV-2","AACTGGGTGGACCCCG",4,30.29,10.79,-0.04,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGGTCAATGCGTG",1,28.51,10.77,-0.07,0.06,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGTAAAAGCAATC",6,134.95,10.88,0.04,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGTAAAGATTCTC",2,0.12,NA,NA,NA,NA,NA,NA,"stop","L38* S45V K56V G86V",4
"lib2","SARS-CoV-2","AACTGTAAGAATATTG",7,55.45,6.25,-4.58,0.62,1.79,1.17,0.02,">1 nonsynonymous","G9K D59P S139F G152S",4
"lib2","SARS-CoV-2","AACTGTAATAGAAAAG",21,262.64,10.67,-0.17,0.03,2.96,1.04,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","AACTGTAATCAAATTG",3,42.38,9.6,-1.23,0.11,2.72,1.1,0.01,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","AACTGTACGTTGGTAG",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107G F160Y",2
"lib2","SARS-CoV-2","AACTGTACTAAACGAG",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88R L131M",2
"lib2","SARS-CoV-2","AACTGTACTCACGTAT",11,22.35,7.42,-3.42,0.33,1.5,1.16,0.03,">1 nonsynonymous","V180E F185T",2
"lib2","SARS-CoV-2","AACTGTAGCAAGTTCA",4,48.47,10.8,-0.03,0.05,2.95,1.02,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","AACTGTATATGTTAAC",6,82.42,8.9,-1.93,0.23,1.5,1.09,0.02,">1 nonsynonymous","V32K P82I D98S",3
"lib2","SARS-CoV-2","AACTGTATCTTCATTA",4,45.1,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D75T K87M R124L",3
"lib2","SARS-CoV-2","AACTGTCAAACTGACT",11,125.82,9.95,-0.89,0.05,2.12,1.02,0,">1 nonsynonymous","D59A A81G D98Y",3
"lib2","SARS-CoV-2","AACTGTCCTGATATCA",3,2.37,NA,NA,NA,NA,NA,NA,"stop","L60N L131F K132* G174W",4
"lib2","SARS-CoV-2","AACTGTCGAAACACCA",2,36.93,8.98,-1.86,0.13,1.92,1.06,0.01,">1 nonsynonymous","F44L A89I",2
"lib2","SARS-CoV-2","AACTGTCGAAGAATAC",8,159.3,10.77,-0.07,0.04,2.95,1.07,0,"1 nonsynonymous","S36M",1
"lib2","SARS-CoV-2","AACTGTCTTAGATCAA",6,60.28,7.38,-3.46,0.45,1.5,1.27,0.05,">1 nonsynonymous","S19L D90L",2
"lib2","SARS-CoV-2","AACTGTCTTGGTTTTT",4,68.63,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L38D Y93N D98E N120L Y143E N171P",6
"lib2","SARS-CoV-2","AACTGTGCTACGGCAG",2,95.5,10.84,0,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGTGCTGACATGT",3,24.36,10.4,-0.43,0.09,2.77,1.17,0,">1 nonsynonymous","T15E N30Y",2
"lib2","SARS-CoV-2","AACTGTGCTTTACACG",5,25.1,6.1,-4.74,0.82,1.5,1.15,0.02,">1 nonsynonymous","R16A G83S P133S V173S",4
"lib2","SARS-CoV-2","AACTGTGTGCATAAAA",12,137.36,10.62,-0.21,0.04,2.9,1.07,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","AACTGTTAATATTTAC",1,6.23,6,-4.84,2,3,1,0,">1 nonsynonymous","Y119L D137G S184P",3
"lib2","SARS-CoV-2","AACTGTTACGATCCGC",5,63.27,10.79,-0.04,0.06,2.92,1.09,0,">1 nonsynonymous","C61Q T201M",2
"lib2","SARS-CoV-2","AACTGTTAGTCCTAGA",12,119.17,9.67,-1.17,0.07,2.84,1.05,0,">1 nonsynonymous","I2Y D90Y F156L",3
"lib2","SARS-CoV-2","AACTGTTATACCTCTT",8,109.42,10.27,-0.56,0.03,2.94,1.04,0,">1 nonsynonymous","A18E S41H F44L",3
"lib2","SARS-CoV-2","AACTGTTATCAGCTTG",8,85.3,10.83,-0.01,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTGTTATCATCTCA",2,13.36,10.72,-0.11,0.11,2.89,1.15,0.01,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","AACTGTTCAAAAGTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","G51P S113*",2
"lib2","SARS-CoV-2","AACTGTTCAGGAGAAA",11,293.8,10.56,-0.28,0.03,2.92,1.08,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","AACTGTTCTATCTCAA",1,12.07,6,-4.84,2,2.56,1.08,0,">1 nonsynonymous","A22L G51S K114P",3
"lib2","SARS-CoV-2","AACTGTTGATGAAATA",2,48.74,10.71,-0.13,0.03,2.95,1.07,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","AACTGTTGTAACGTGA",3,96.82,10.09,-0.75,0.07,2.7,1,0,">1 nonsynonymous","L5D F134H N151I",3
"lib2","SARS-CoV-2","AACTTAAAAAAACTCA",5,21.77,10.91,0.08,0.06,2.91,1.09,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","AACTTAAAACTCCCCG",1,36.86,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","N1M V20R A33P Y119I T140D Q168T",6
"lib2","SARS-CoV-2","AACTTAAAATGCCCTT",3,57.61,10.77,-0.06,0.05,2.99,1.04,0,">1 nonsynonymous","S139G Y143F",2
"lib2","SARS-CoV-2","AACTTAAAATTGGTAA",3,8.34,10.76,-0.08,0.12,2.59,1.43,0.01,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","AACTTAAACAAAAAGC",12,2.03,NA,NA,NA,NA,NA,NA,"stop","E10S G86L P96R R136A F156* T201K",6
"lib2","SARS-CoV-2","AACTTAAAGACCTTCA",2,8.68,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S45W Y91T S129P N157K",4
"lib2","SARS-CoV-2","AACTTAAAGCAAATCC",1,8.85,9.99,-0.85,0.4,2.27,1,0.04,">1 nonsynonymous","C6Q G155I",2
"lib2","SARS-CoV-2","AACTTAAAGTGAGCAT",1,18.66,10.8,-0.04,0.09,2.91,1.12,0,">1 nonsynonymous","N40H S45E",2
"lib2","SARS-CoV-2","AACTTAACGAAATAAA",19,287.69,9.46,-1.37,0.05,2.63,1.05,0,">1 nonsynonymous","F8M S41K G174W",3
"lib2","SARS-CoV-2","AACTTAACTCAAATAC",4,15.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","W106A G116V Y175D",3
"lib2","SARS-CoV-2","AACTTAAGCGCTTAAT",3,51.81,10.77,-0.06,0.03,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AACTTAAGCTACTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E154L V182L",2
"lib2","SARS-CoV-2","AACTTAAGTAAAAGGT",3,74.58,10.74,-0.1,0.07,2.87,1.15,0,">1 nonsynonymous","N107A L122K",2
"lib2","SARS-CoV-2","AACTTAATACCCTCGA",3,35.29,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","AACTTAATACCTGTGG",15,63.28,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V65W G116Y I142T F167S",4
"lib2","SARS-CoV-2","AACTTAATAGAAGTTT",2,0.84,NA,NA,NA,NA,NA,NA,"stop","K56M N92L D97G A105* Y143S",5
"lib2","SARS-CoV-2","AACTTAATCAAAGTGG",10,56.52,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37D F70S G86V F99G N151L N171H",6
"lib2","SARS-CoV-2","AACTTAATGAATTGGT",4,85.77,8.88,-1.96,0.04,2.94,1.05,0,">1 nonsynonymous","D59M Y119L",2
"lib2","SARS-CoV-2","AACTTAATGAGATGCG",17,199.55,10.71,-0.13,0.04,2.95,1.04,0,"1 nonsynonymous","S41I",1
"lib2","SARS-CoV-2","AACTTAATGCACAACT",5,75.93,10.77,-0.06,0.06,2.85,1.13,0,">1 nonsynonymous","S53D I104T",2
"lib2","SARS-CoV-2","AACTTAATTGAACCCA",12,152.85,9.72,-1.11,0.07,2.14,1.03,0,">1 nonsynonymous","F8S T201I",2
"lib2","SARS-CoV-2","AACTTACACCGCGGAT",7,53.25,8.13,-2.7,0.19,1.5,1.17,0.02,">1 nonsynonymous","L60K A89T R136S T201R",4
"lib2","SARS-CoV-2","AACTTACAGCATAACA",5,46.51,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F17R D112G L183F",3
"lib2","SARS-CoV-2","AACTTACAGGCAATAG",8,275.09,10.54,-0.3,0.04,2.88,1.09,0,">1 nonsynonymous","A33I T63K",2
"lib2","SARS-CoV-2","AACTTACAGGGTGAAA",9,377.79,7.83,-3.01,0.12,2.18,1.14,0.01,">1 nonsynonymous","A67C Y119S N171R",3
"lib2","SARS-CoV-2","AACTTACATTTATCAA",4,19.47,9.73,-1.1,0.08,1.95,1.04,0,">1 nonsynonymous","T46Q G51V L95I",3
"lib2","SARS-CoV-2","AACTTACCCATCTGGA",2,23.5,10.3,-0.54,0.11,2.64,1.21,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AACTTACCTTTTCCCG",3,15.16,7.73,-3.1,0.26,1.5,1,0.02,">1 nonsynonymous","T46L K94D T201Q",3
"lib2","SARS-CoV-2","AACTTACGCGAGGGAC",19,3.41,NA,NA,NA,NA,NA,NA,"stop","T46* V77L P161L",3
"lib2","SARS-CoV-2","AACTTACGGACTTAGC",1,10.27,10.46,-0.38,0.1,2.97,1.04,0.01,">1 nonsynonymous","Y39S I104V",2
"lib2","SARS-CoV-2","AACTTACTTTCTCAAC",5,68.97,10.29,-0.55,0.05,2.93,1.1,0,">1 nonsynonymous","C61P G155S",2
"lib2","SARS-CoV-2","AACTTAGAATACGTGA",3,28.64,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5F F44V R78T K94E L125C S139T F185N",7
"lib2","SARS-CoV-2","AACTTAGACGATTCGA",3,52.82,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32K N58W K94L K114A G146V F156P",6
"lib2","SARS-CoV-2","AACTTAGAGAATCTTT",5,71.25,10.69,-0.15,0.03,2.92,1.07,0,">1 nonsynonymous","K56L V115L",2
"lib2","SARS-CoV-2","AACTTAGAGTGTAGGA",9,51.92,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N40I P96L K114E S139A",4
"lib2","SARS-CoV-2","AACTTAGCAAATTTCT",3,46.23,10.77,-0.07,0.09,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTAGCCCGAGACG",13,97.7,10.8,-0.04,0.05,2.88,1.13,0,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","AACTTAGCGTGAATGC",6,40.73,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F47R E135L A145E",3
"lib2","SARS-CoV-2","AACTTAGGTGACAATA",6,2.98,NA,NA,NA,NA,NA,NA,"stop","I2K N92* F99N",3
"lib2","SARS-CoV-2","AACTTAGTCATAAATT",10,141.85,8.96,-1.88,0.07,2.01,1.07,0,">1 nonsynonymous","L5D G51M I142W",3
"lib2","SARS-CoV-2","AACTTATAAAGCGTTG",1,6.48,8.5,-2.33,0.15,3,1.09,0.01,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","AACTTATAACTAATCT",2,38.82,10.81,-0.02,0.02,2.99,1.02,0,"1 nonsynonymous","P54H",1
"lib2","SARS-CoV-2","AACTTATACCATTTCA",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V Y93L G146M",3
"lib2","SARS-CoV-2","AACTTATATCATAGGT",23,488.5,10.31,-0.52,0.03,2.97,1.03,0,">1 nonsynonymous","Y121L N151S",2
"lib2","SARS-CoV-2","AACTTATATGTATATA",4,25.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D68L K87I",2
"lib2","SARS-CoV-2","AACTTATCAGAAATAC",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29I L60I N118E C158S",4
"lib2","SARS-CoV-2","AACTTATGAACTAAAA",8,46.96,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","D75K F99C N151W F160S P177T",5
"lib2","SARS-CoV-2","AACTTATGAGTGACAC",4,49.62,10.8,-0.03,0.1,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTATTCATGTCCT",2,53.85,10.62,-0.22,0.07,2.89,1.12,0,">1 nonsynonymous","V77L V194L",2
"lib2","SARS-CoV-2","AACTTATTGGATCACC",2,82.74,10.32,-0.52,0.05,2.92,1.07,0,">1 nonsynonymous","S41I F156P",2
"lib2","SARS-CoV-2","AACTTCAAAAAAATAT",2,144.05,8.75,-2.09,0.07,2.97,1.11,0,"1 nonsynonymous","G166Y",1
"lib2","SARS-CoV-2","AACTTCAACACGGGGG",2,30.97,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F8L Y39S C49I L95S Q176L",5
"lib2","SARS-CoV-2","AACTTCAACCGGCAAA",7,2.99,NA,NA,NA,NA,NA,NA,"stop","P7L A42* I88C",3
"lib2","SARS-CoV-2","AACTTCAACGACGTAA",8,77.16,10.06,-0.78,0.05,2.76,1.05,0,">1 nonsynonymous","S41Y D90T P149T",3
"lib2","SARS-CoV-2","AACTTCAAGAAACTAC",8,67.61,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N58T Y66I P96L L125H Q163L G172R",6
"lib2","SARS-CoV-2","AACTTCAATTACGTTG",4,103.82,9.91,-0.93,0.08,2.29,1.04,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","AACTTCACCTTAAACC",4,124.47,10.8,-0.04,0.05,2.87,1.06,0,"1 nonsynonymous","E141H",1
"lib2","SARS-CoV-2","AACTTCACCTTAAAGG",5,4.04,NA,NA,NA,NA,NA,NA,"stop","A33* L183S",2
"lib2","SARS-CoV-2","AACTTCACGCAAAATA",3,29.44,10.4,-0.43,0.09,2.84,1.02,0,">1 nonsynonymous","R27V S41E N64Q D90H P191T",5
"lib2","SARS-CoV-2","AACTTCACTATCTAAA",1,25.4,8.46,-2.38,0.26,1.81,1.18,0.03,">1 nonsynonymous","V77M A89S A105M Y119R",4
"lib2","SARS-CoV-2","AACTTCACTGGTACGT",5,47.37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F44L N120Q L131K",3
"lib2","SARS-CoV-2","AACTTCATGATCAGGT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","L60I D97Y L122H P169I Q176*",5
"lib2","SARS-CoV-2","AACTTCATTGATGATA",1,14.79,10.92,0.08,0.15,2.78,1.23,0.01,"synonymous","",0
"lib2","SARS-CoV-2","AACTTCCAAAAACAAT",3,12.55,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I2S A14M I72D G86T N92L L125F",6
"lib2","SARS-CoV-2","AACTTCCAGGCATGAA",3,26.88,9.36,-1.48,0.09,1.88,1.13,0,">1 nonsynonymous","N1A W106C",2
"lib2","SARS-CoV-2","AACTTCCAGTATAACT",6,165.66,10.71,-0.13,0.04,2.89,1.13,0,">1 nonsynonymous","V37L N120F",2
"lib2","SARS-CoV-2","AACTTCCATCAGTATC",3,27.31,10.39,-0.44,0.08,2.85,1.11,0,">1 nonsynonymous","F17W T170Q",2
"lib2","SARS-CoV-2","AACTTCCCTTATACAA",1,19.28,10.7,-0.14,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTCCGAACAAATA",11,95.12,9.31,-1.53,0.08,1.86,1.05,0,">1 nonsynonymous","F8P L60S D97H V173R T201V",5
"lib2","SARS-CoV-2","AACTTCCGTACACCTT",2,0.38,NA,NA,NA,NA,NA,NA,"stop","T46A C150*",2
"lib2","SARS-CoV-2","AACTTCCTGATAAAAG",2,19.14,10.2,-0.63,0.07,2.75,1.06,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","AACTTCGAGTCCCAAG",2,61.26,10.65,-0.19,0.06,2.87,1.08,0,">1 nonsynonymous","T3P D34N",2
"lib2","SARS-CoV-2","AACTTCGATTATACCT",1,85.36,9.27,-1.57,0.11,1.75,1.08,0,">1 nonsynonymous","D90C D97I K128I",3
"lib2","SARS-CoV-2","AACTTCGCCACACAAT",7,74.91,10.76,-0.08,0.04,2.86,1.15,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","AACTTCGGGACGACGG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","K56* F62V Y119G D137C",4
"lib2","SARS-CoV-2","AACTTCGTTCACAATC",9,164.52,10.79,-0.05,0.05,2.92,1.09,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","AACTTCTAAAGCTGTA",3,0.68,NA,NA,NA,NA,NA,NA,"stop","S69* P96F I104K",3
"lib2","SARS-CoV-2","AACTTCTAATTCCTGA",2,5.79,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F12M V20L F160C",3
"lib2","SARS-CoV-2","AACTTCTGCAACGTTA",12,146.47,8.68,-2.15,0.23,1.5,1.03,0.02,">1 nonsynonymous","L38T L60V L95M",3
"lib2","SARS-CoV-2","AACTTCTGCAGCCAGG",2,37.9,10.24,-0.6,0.11,2.61,1.08,0,">1 nonsynonymous","E10Q F44D Q163C",3
"lib2","SARS-CoV-2","AACTTCTGTATACAAT",14,8,NA,NA,NA,NA,NA,NA,"stop","D59E L60I T85Y T100* K114W",5
"lib2","SARS-CoV-2","AACTTCTGTATATGAC",2,16.53,8.35,-2.49,0.16,1.6,1.05,0.01,">1 nonsynonymous","P7V Q144Y G174Q",3
"lib2","SARS-CoV-2","AACTTCTTAACATGAA",4,84.29,10.57,-0.27,0.06,2.82,1.15,0,">1 nonsynonymous","A22M Y66N",2
"lib2","SARS-CoV-2","AACTTCTTACCAAGCT",3,60.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37T T85E I88L D97A W106T G152L T201M",7
"lib2","SARS-CoV-2","AACTTCTTGCTCCGTG",1,7.45,6.93,-3.91,0.99,1.5,1.22,0.06,"1 nonsynonymous","V181S",1
"lib2","SARS-CoV-2","AACTTCTTTACATCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","D34H D75K P96T I104*",4
"lib2","SARS-CoV-2","AACTTGAAAAACATTA",17,132.82,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10S L38C N109S T148R",4
"lib2","SARS-CoV-2","AACTTGAAATCCATTA",15,420.8,10.2,-0.63,0.03,2.97,1.04,0,"1 nonsynonymous","E154H",1
"lib2","SARS-CoV-2","AACTTGAACCGCTCAT",1,6.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A81L S139Q",2
"lib2","SARS-CoV-2","AACTTGAACTGAAATA",5,52.19,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R27E K94W P133R",3
"lib2","SARS-CoV-2","AACTTGACCTGCCGAG",1,0.24,NA,NA,NA,NA,NA,NA,"stop","T63F R127* S129I T201M",4
"lib2","SARS-CoV-2","AACTTGACGAAATGCA",7,132.85,10.3,-0.53,0.04,2.91,1.1,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","AACTTGAGCTACAATT",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E T85F L95P V103M G117Q K132P V173P",7
"lib2","SARS-CoV-2","AACTTGAGGGTCAATG",3,1.45,NA,NA,NA,NA,NA,NA,"stop","S19* G86E R179G",3
"lib2","SARS-CoV-2","AACTTGAGTGAAGTCA",6,1.82,NA,NA,NA,NA,NA,NA,"stop","A89R D97*",2
"lib2","SARS-CoV-2","AACTTGATAACCGTAA",10,114.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R25V R73P T100N Q144H",4
"lib2","SARS-CoV-2","AACTTGATACGTCGCA",6,114.19,10.86,0.02,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTGATATGACCTT",9,180.23,10.61,-0.22,0.04,2.87,1.06,0,"1 nonsynonymous","T100W",1
"lib2","SARS-CoV-2","AACTTGATGTTCACGA",3,61.24,10.85,0.01,0.08,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTGATTGCTATAC",3,17.37,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S19T T55A Q79L Q144R G174E",5
"lib2","SARS-CoV-2","AACTTGATTTAAGACC",11,149.74,10.66,-0.17,0.04,2.98,1.03,0,">1 nonsynonymous","P7H P149S",2
"lib2","SARS-CoV-2","AACTTGCAATGCTCTT",5,31.14,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V103G Y175D",2
"lib2","SARS-CoV-2","AACTTGCGGTGGCATG",1,90.01,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","P177K",1
"lib2","SARS-CoV-2","AACTTGCTCACAACAA",4,16.9,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14K P54H G86P P149N",4
"lib2","SARS-CoV-2","AACTTGCTTATAGGCA",16,116.58,9.63,-1.21,0.05,2.04,1.09,0,">1 nonsynonymous","L57V K128G E135D",3
"lib2","SARS-CoV-2","AACTTGGAAACCGTAA",2,24.23,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","T3N S19F V37K G51C G86I W106S R127K T140V S147L G152H",10
"lib2","SARS-CoV-2","AACTTGGAACCCTCAC",4,24.86,10.1,-0.73,0.1,2.63,1.03,0.01,">1 nonsynonymous","L5F R127S",2
"lib2","SARS-CoV-2","AACTTGGCTAAATATT",3,111.43,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30R N109D N120T G166P",4
"lib2","SARS-CoV-2","AACTTGGGTAAGGAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y119T R127* Q168T",3
"lib2","SARS-CoV-2","AACTTGGTTAAGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12L K48W N58S Y143* E154Q",5
"lib2","SARS-CoV-2","AACTTGTACATAGATT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","R127* D137W G146A",3
"lib2","SARS-CoV-2","AACTTGTAGACGACGA",2,25.72,7.54,-3.3,0.3,1.51,1.12,0.03,"1 nonsynonymous","Y175T",1
"lib2","SARS-CoV-2","AACTTGTCATAGTAAA",8,158.48,9.98,-0.85,0.06,2.53,1,0,">1 nonsynonymous","G9I D98L",2
"lib2","SARS-CoV-2","AACTTGTGACGATAAG",3,8.39,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","P7N S41L L57S F126I N151Y Q176L",6
"lib2","SARS-CoV-2","AACTTGTGCTATAGAA",6,100.79,10.65,-0.18,0.03,2.91,1.06,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","AACTTGTTCAATTCCT",2,34.38,10.46,-0.38,0.05,2.93,1.06,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","AACTTGTTGAAAACCG",1,43.51,10.78,-0.06,0.03,2.96,1.05,0,"1 nonsynonymous","K94R",1
"lib2","SARS-CoV-2","AACTTTAACCAGCCCA",3,84.11,9.84,-1,0.11,2.05,1.09,0,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","AACTTTAATACGTTAT",4,18.81,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F44M L95S G116I E154R Q168V G196T",6
"lib2","SARS-CoV-2","AACTTTACCTGAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","P82N Y91* G155F Y165H H189L",5
"lib2","SARS-CoV-2","AACTTTAGGGTTCCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C P133G I142F Y143H",4
"lib2","SARS-CoV-2","AACTTTATCACAATGA",2,37.61,10.27,-0.56,0.06,2.95,1.05,0,">1 nonsynonymous","R78F T100N",2
"lib2","SARS-CoV-2","AACTTTATTAAATCAG",1,31.63,8.33,-2.5,0.15,2.08,1.08,0.01,">1 nonsynonymous","K26Q S41A D90N D112E",4
"lib2","SARS-CoV-2","AACTTTATTACACTCC",1,57.36,10.84,0,0.05,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTTATTGCAGTGC",6,162.09,10.67,-0.16,0.05,2.98,1,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","AACTTTCAAATAAACA",5,111.27,10.52,-0.32,0.05,2.89,1.07,0,"1 nonsynonymous","D98F",1
"lib2","SARS-CoV-2","AACTTTCAAGTACCAA",6,167.72,9.66,-1.17,0.08,1.95,1.07,0,">1 nonsynonymous","A22R L38D",2
"lib2","SARS-CoV-2","AACTTTCATACTTTAT",5,5.93,NA,NA,NA,NA,NA,NA,"stop","N64* Y93S R136C P149R Q163M K198A",6
"lib2","SARS-CoV-2","AACTTTCCCAATAGAG",7,134.5,6,-4.84,2,1.7,1.36,0.02,"1 nonsynonymous","G172P",1
"lib2","SARS-CoV-2","AACTTTCGTTAAACAA",1,15.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D98K N107L Y143I",3
"lib2","SARS-CoV-2","AACTTTCTACCAATAC",4,49.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V103K N120L Y143S",3
"lib2","SARS-CoV-2","AACTTTGAACGCTTAC",6,40.39,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","R73N R124S K128M Y165S",4
"lib2","SARS-CoV-2","AACTTTGATAGTCTGG",6,28.74,10.82,-0.02,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AACTTTGGGGAAAACC",4,60.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R127L P161L",2
"lib2","SARS-CoV-2","AACTTTGTAAACACTC",3,0,NA,NA,NA,NA,NA,NA,"stop","G9R Y91F G146V N157*",4
"lib2","SARS-CoV-2","AACTTTTAAACCTGGT",1,0.47,NA,NA,NA,NA,NA,NA,"stop","G86* Y93K C102F",3
"lib2","SARS-CoV-2","AACTTTTCGCGGCTTA",4,21.31,9.17,-1.67,0.13,2.46,1.08,0.01,">1 nonsynonymous","D97T I142T P169L",3
"lib2","SARS-CoV-2","AACTTTTGTTCACCGT",1,45.01,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C6D G83D Y121I Y143G",4
"lib2","SARS-CoV-2","AACTTTTTAATAAGCG",5,2.58,NA,NA,NA,NA,NA,NA,"stop","N1T N13M S19* N40G C61V P96Q W106Q D112Y N120P R127V I142L",11
"lib2","SARS-CoV-2","AACTTTTTTTCATACT",6,29.06,6.43,-4.4,0.41,1.5,1.08,0.01,">1 nonsynonymous","C6V S19Q I80W Y119C",4
"lib2","SARS-CoV-2","AAGAAAAAAAAAAATG",5,45.62,9.52,-1.32,0.09,2.06,1.11,0,">1 nonsynonymous","N13C S36E N58A N110M",4
"lib2","SARS-CoV-2","AAGAAAAAAACGAAAA",3,66.59,10.22,-0.62,0.05,2.81,1.12,0,">1 nonsynonymous","T15K V37S F62S P149T",4
"lib2","SARS-CoV-2","AAGAAAAAACAGCACG",7,134.57,11.03,0.19,0.05,2.91,1.1,0,"1 nonsynonymous","S147P",1
"lib2","SARS-CoV-2","AAGAAAAAACAGCATT",8,107.44,8.33,-2.51,0.29,1.5,1,0.04,">1 nonsynonymous","S36W V77K",2
"lib2","SARS-CoV-2","AAGAAAAAAGCAGAAA",10,163.03,10.8,-0.03,0.05,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAAAAAGGTCCTA",2,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N V37S G51Y",3
"lib2","SARS-CoV-2","AAGAAAAAATGAGTCA",6,0.16,NA,NA,NA,NA,NA,NA,"stop","Y39R T63V T85C G116* F134L",5
"lib2","SARS-CoV-2","AAGAAAAACGTCTCGG",2,2.84,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAAAAGAACTTAT",11,82.02,10.81,-0.02,0.05,2.91,1.1,0,"1 nonsynonymous","R16L",1
"lib2","SARS-CoV-2","AAGAAAAATATACAAC",6,27.35,10.85,0.01,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAAAATCGCGGGG",8,48.81,10.71,-0.12,0.07,2.93,1.02,0,">1 nonsynonymous","E10C Y35L",2
"lib2","SARS-CoV-2","AAGAAAAATGATGTTA",4,97.43,10.77,-0.07,0.06,2.85,1.09,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","AAGAAAAATGTGCCAT",6,223.08,10.11,-0.73,0.05,2.68,1.03,0,">1 nonsynonymous","Y35R P54T K56S",3
"lib2","SARS-CoV-2","AAGAAAAATTTGAGAT",2,1.73,NA,NA,NA,NA,NA,NA,"stop","N64* D137R",2
"lib2","SARS-CoV-2","AAGAAAACAAGTTAGT",10,1.23,NA,NA,NA,NA,NA,NA,"stop","A22* K56Q",2
"lib2","SARS-CoV-2","AAGAAAACATATGGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","I28V Q79* N118E K198T",4
"lib2","SARS-CoV-2","AAGAAAACGACAATCA",5,161.79,9.54,-1.29,0.05,1.86,1.06,0,">1 nonsynonymous","P96K P133G",2
"lib2","SARS-CoV-2","AAGAAAACTATCCAGC",8,4.68,NA,NA,NA,NA,NA,NA,"stop","A14* E154S",2
"lib2","SARS-CoV-2","AAGAAAAGAAAACCAA",3,17.5,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F8R Y143L P149F P161Q",4
"lib2","SARS-CoV-2","AAGAAAAGATCAACAC",1,44.46,10.12,-0.71,0.06,2.69,1.01,0,">1 nonsynonymous","I104Y S129V E135T",3
"lib2","SARS-CoV-2","AAGAAAAGCGGACAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L F44S V103C",3
"lib2","SARS-CoV-2","AAGAAAAGGCTACGAA",1,1.42,NA,NA,NA,NA,NA,NA,"stop","T170Q P197*",2
"lib2","SARS-CoV-2","AAGAAAAGTAATATTC",3,24.6,10.15,-0.68,0.11,2.68,1.04,0.01,">1 nonsynonymous","G51F T201S",2
"lib2","SARS-CoV-2","AAGAAAAGTATAGAAC",8,167.93,9.54,-1.29,0.05,2.73,1.09,0,">1 nonsynonymous","A33R N120K F156L",3
"lib2","SARS-CoV-2","AAGAAAATAAAAGCGC",8,0.18,NA,NA,NA,NA,NA,NA,"stop","S19L C61* F160H P169L",4
"lib2","SARS-CoV-2","AAGAAAATAAGCAAGG",5,1.34,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib2","SARS-CoV-2","AAGAAAATAATGCCTG",12,10.39,NA,NA,NA,NA,NA,NA,"stop","L38* F99H N110L",3
"lib2","SARS-CoV-2","AAGAAAATAGAAAACA",5,98.94,10.46,-0.38,0.04,2.93,1.08,0,"1 nonsynonymous","A145T",1
"lib2","SARS-CoV-2","AAGAAAATAGAAAGAA",2,16.93,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","V52K D97N S108I F126L",4
"lib2","SARS-CoV-2","AAGAAAATAGGTGCTT",3,33.03,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D112M F126E Y143G",3
"lib2","SARS-CoV-2","AAGAAAATCATTCCTT",1,7.22,10.76,-0.08,0.05,3,1,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AAGAAAATGAAGCTAT",1,5.76,8.47,-2.36,0.29,1.66,1.25,0.02,">1 nonsynonymous","F8L A42S D98S A105V E186S",5
"lib2","SARS-CoV-2","AAGAAAATGGTTAATA",8,117.48,10.16,-0.68,0.07,2.57,1,0,"1 nonsynonymous","V52G",1
"lib2","SARS-CoV-2","AAGAAAATTAACAATA",7,50.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F17N G101R G174E",3
"lib2","SARS-CoV-2","AAGAAAATTATCCACC",4,49.09,10.52,-0.32,0.03,2.96,1.05,0,">1 nonsynonymous","N1P T15E G83N",3
"lib2","SARS-CoV-2","AAGAAAATTGCCCGGA",2,55.15,10.11,-0.73,0.09,2.67,1.06,0,">1 nonsynonymous","Q84A T170M",2
"lib2","SARS-CoV-2","AAGAAACAAAGCAACG",9,205.3,8.09,-2.75,0.13,1.62,1.1,0.01,">1 nonsynonymous","D90R Q176R",2
"lib2","SARS-CoV-2","AAGAAACAAAGCAAGC",7,109.32,10.63,-0.2,0.03,2.95,1.07,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AAGAAACAAATAATGT",4,43.18,9.5,-1.34,0.11,2.44,1.09,0,">1 nonsynonymous","D90N I138G V173G",3
"lib2","SARS-CoV-2","AAGAAACAATTCAATT",8,71.7,10.84,0,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAACACGTAAAGG",4,2.25,NA,NA,NA,NA,NA,NA,"stop","G116N E141*",2
"lib2","SARS-CoV-2","AAGAAACAGCTCGATT",5,38.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A67C N92C Q168C",3
"lib2","SARS-CoV-2","AAGAAACATAAACTCA",10,123.67,8.12,-2.71,0.11,1.77,1.08,0,">1 nonsynonymous","G117N R136W F160N K199L",4
"lib2","SARS-CoV-2","AAGAAACCAAACACAC",5,77.43,10.74,-0.09,0.03,2.9,1.09,0,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","AAGAAACCAAGGCGAA",2,40.74,6.41,-4.43,0.44,1.5,1.19,0.01,">1 nonsynonymous","N1M D34L I80R E141Q T148L K198G",6
"lib2","SARS-CoV-2","AAGAAACCAGTAATGT",3,161.02,10.25,-0.59,0.04,2.67,1.03,0,">1 nonsynonymous","L60Y W106R L131I F160S",4
"lib2","SARS-CoV-2","AAGAAACCCGGGATGT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","R25G S139E V173* Q176L",4
"lib2","SARS-CoV-2","AAGAAACCGGTGTACG",13,64.34,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A14G C150R Y165R Y178P",4
"lib2","SARS-CoV-2","AAGAAACGCTACAGGA",4,0.97,NA,NA,NA,NA,NA,NA,"stop","N58*",1
"lib2","SARS-CoV-2","AAGAAACGTAAATGTT",6,71.78,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S19M N92Q Y121I P133H",4
"lib2","SARS-CoV-2","AAGAAACTAACGTTCG",9,30.53,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F44E G155T R179M",3
"lib2","SARS-CoV-2","AAGAAACTAATATTCA",6,55.08,9.97,-0.87,0.04,2.75,1.04,0,">1 nonsynonymous","A14K F134Y Q144L",3
"lib2","SARS-CoV-2","AAGAAACTACAAAACC",2,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N L60W I104S K132T C150G C158Y",6
"lib2","SARS-CoV-2","AAGAAACTACGAGAGG",4,0,NA,NA,NA,NA,NA,NA,"stop","T15* E76K V103A",3
"lib2","SARS-CoV-2","AAGAAACTCGAGCTTT",4,118.66,8.72,-2.12,0.06,2.87,1.06,0,">1 nonsynonymous","D90M F126R",2
"lib2","SARS-CoV-2","AAGAAACTGCGATGAC",17,60.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56W F99N S129F",3
"lib2","SARS-CoV-2","AAGAAACTTGTACTGA",3,33.38,10.93,0.1,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAAGAAAGCTCAG",8,39.73,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4K F17K K56T A89M F160G",5
"lib2","SARS-CoV-2","AAGAAAGAAAGTTAAA",10,47.3,7.79,-3.05,0.43,1.5,1,0.07,">1 nonsynonymous","A14L L95G N107V G155H",4
"lib2","SARS-CoV-2","AAGAAAGAAAGTTAAT",7,92.8,10.17,-0.67,0.04,2.95,1.03,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","AAGAAAGAACTAGACC",3,35.6,10.91,0.07,0.06,2.94,1.08,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","AAGAAAGACAAAAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","G9Q F44* G83Y V103D N171S",5
"lib2","SARS-CoV-2","AAGAAAGACAATATGA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","AAGAAAGACACGTACG",3,34.53,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y66G Q84R N107C",3
"lib2","SARS-CoV-2","AAGAAAGACTGTAATT",4,32.94,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R25T L95R L187F",3
"lib2","SARS-CoV-2","AAGAAAGAGGCGGCGG",20,248.91,8.35,-2.49,0.1,2.38,1.11,0,">1 nonsynonymous","Y143C S184G",2
"lib2","SARS-CoV-2","AAGAAAGATAACTCAA",1,33.14,9.96,-0.88,0.09,2.75,1.05,0,">1 nonsynonymous","K87G D98V H189S",3
"lib2","SARS-CoV-2","AAGAAAGATATATGAC",3,52.93,10.75,-0.09,0.04,3,1.01,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","AAGAAAGCACATGATT",6,90.53,10.24,-0.59,0.05,2.72,1.04,0,"1 nonsynonymous","V52N",1
"lib2","SARS-CoV-2","AAGAAAGCACTTTGGA",15,2511.67,10.27,-0.57,0.02,2.92,1.01,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","AAGAAAGCATATCCGG",4,49.13,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","R124A T170A",2
"lib2","SARS-CoV-2","AAGAAAGCATTCTTAC",4,27.43,10.76,-0.08,0.03,2.92,1.08,0,">1 nonsynonymous","E10D N58M N130K C195R",4
"lib2","SARS-CoV-2","AAGAAAGCCCCGGTTT",16,142.98,6,-4.84,1.12,1.5,1.13,0,">1 nonsynonymous","I88S N107S",2
"lib2","SARS-CoV-2","AAGAAAGCGATTAATT",8,96.04,10.39,-0.44,0.04,2.87,1.1,0,"1 nonsynonymous","S147C",1
"lib2","SARS-CoV-2","AAGAAAGCGGAAGCAT",4,106.29,10.6,-0.23,0.04,2.9,1.07,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","AAGAAAGCGGCGTTAT",7,100.18,10.48,-0.36,0.05,2.9,1.05,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","AAGAAAGCTATCGAGG",1,41.96,10.95,0.11,0.06,2.96,1.04,0,">1 nonsynonymous","H189Q T201F",2
"lib2","SARS-CoV-2","AAGAAAGCTTTGTAAC",4,46.83,10.88,0.05,0.08,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGAAAGGAATCAAAA",15,193.52,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V20D G51K V65F G86S",4
"lib2","SARS-CoV-2","AAGAAAGGACAGATAG",8,42.35,9.88,-0.95,0.09,1.97,1.04,0,">1 nonsynonymous","F12I K26Q D97R S129Y N151M",5
"lib2","SARS-CoV-2","AAGAAAGGCAAATTTA",2,26.42,9.11,-1.73,0.21,2.01,1.04,0.02,">1 nonsynonymous","N64T D137N",2
"lib2","SARS-CoV-2","AAGAAAGGCATAGGTA",8,70.1,6,-4.84,1.83,1.5,1.12,0.01,">1 nonsynonymous","Y91N D112S",2
"lib2","SARS-CoV-2","AAGAAAGGTAAAGATG",3,16.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64L E154T R179I",3
"lib2","SARS-CoV-2","AAGAAAGGTCACGCTT",11,161.05,10.8,-0.04,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAAGTAAACGCAT",3,155.46,10.35,-0.49,0.03,2.85,1.04,0,"1 nonsynonymous","F134K",1
"lib2","SARS-CoV-2","AAGAAAGTGAATATGA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","P7N P96*",2
"lib2","SARS-CoV-2","AAGAAAGTTATTTGCA",2,15.88,10.23,-0.61,0.04,3,1.01,0,">1 nonsynonymous","E10G C31D",2
"lib2","SARS-CoV-2","AAGAAATAAGATCAAA",10,30.89,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N58T V77S G86R D98A",4
"lib2","SARS-CoV-2","AAGAAATAAGGAGGTA",3,10.28,9.18,-1.65,0.4,2.11,1.13,0.07,">1 nonsynonymous","K87L Y119S S139L F156S S200G",5
"lib2","SARS-CoV-2","AAGAAATACAGGTCTA",1,1.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145P",1
"lib2","SARS-CoV-2","AAGAAATAGCAACCTG",12,144.02,10.71,-0.13,0.05,2.93,1.01,0,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","AAGAAATAGTATACGC",3,17.29,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","W23K A67P F99R T100I Y175H L187S",6
"lib2","SARS-CoV-2","AAGAAATATGCGCCCG",3,68.46,10.73,-0.1,0.05,2.87,1.11,0,">1 nonsynonymous","C61R Y143F",2
"lib2","SARS-CoV-2","AAGAAATCATACAATG",11,173.1,10.85,0.01,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAATCTATCAGCA",6,48.47,8.28,-2.56,0.11,2.6,1.06,0,">1 nonsynonymous","K94S Q168D S200I",3
"lib2","SARS-CoV-2","AAGAAATCTTGTATCG",3,43.42,6.12,-4.72,0.73,1.5,1.12,0.02,">1 nonsynonymous","I88A A105W",2
"lib2","SARS-CoV-2","AAGAAATGAACCCTAC",3,26.62,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C6I Y91S K128L P133T",4
"lib2","SARS-CoV-2","AAGAAATGAATTCATT",6,34.39,9.27,-1.57,0.1,1.86,1.05,0.01,">1 nonsynonymous","A14S L60V R73K T85P",4
"lib2","SARS-CoV-2","AAGAAATGGCAGCTCA",4,141.65,10.77,-0.06,0.05,2.94,1.05,0,"1 nonsynonymous","V52L",1
"lib2","SARS-CoV-2","AAGAAATGTCCCATAA",7,79.11,8.38,-2.45,0.09,1.71,1.11,0,">1 nonsynonymous","L38Q T55I G166S",3
"lib2","SARS-CoV-2","AAGAAATTAAGGAAAA",5,87.56,9.46,-1.38,0.1,1.95,1.11,0.01,">1 nonsynonymous","K94Y K114T L122A",3
"lib2","SARS-CoV-2","AAGAAATTATGAAACT",3,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84A N107S",2
"lib2","SARS-CoV-2","AAGAAATTCAATACAC",4,35.09,6.47,-4.37,0.53,2.17,1.36,0.02,">1 nonsynonymous","P7N G51K V103L S139R",4
"lib2","SARS-CoV-2","AAGAAATTCTAAACTT",2,29.4,10.04,-0.8,0.09,2.51,1,0,">1 nonsynonymous","S45M Q163W",2
"lib2","SARS-CoV-2","AAGAAATTCTACAAAT",6,82.42,10.58,-0.25,0.04,2.93,1.07,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","AAGAAATTGACTATGA",2,11.2,9.13,-1.7,0.17,2.07,1.04,0.01,">1 nonsynonymous","E10A N107K T140D",3
"lib2","SARS-CoV-2","AAGAAATTGGGAAAAG",3,142.45,10.84,0.01,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAATTTCAACTTG",4,104.38,8.43,-2.41,0.16,1.5,1.01,0.01,">1 nonsynonymous","N40A R127Q",2
"lib2","SARS-CoV-2","AAGAAATTTCATTTAA",6,111.73,10.92,0.08,0.06,2.96,1.05,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","AAGAAATTTCGGGAAG",6,175.05,10.33,-0.51,0.05,2.92,1.1,0,">1 nonsynonymous","L5S R16D K87S",3
"lib2","SARS-CoV-2","AAGAAATTTCTTCCAT",4,1.83,NA,NA,NA,NA,NA,NA,"stop","P7Q Q84R D97K K132*",4
"lib2","SARS-CoV-2","AAGAAATTTGACACAT",23,289.97,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","D59N V71Y",2
"lib2","SARS-CoV-2","AAGAACAAAACTGTGA",7,135.4,10,-0.84,0.06,2.39,1.03,0,">1 nonsynonymous","K48Y D98E G152N",3
"lib2","SARS-CoV-2","AAGAACAAAACTTAAG",2,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M T63I C102S W106F",4
"lib2","SARS-CoV-2","AAGAACAAACTAACCG",23,295.16,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","W23V Y35Q Y123Q F134C",4
"lib2","SARS-CoV-2","AAGAACAAAGTCACCC",1,6.55,6,-4.84,2,3,1.04,0,">1 nonsynonymous","L60V A81Y G152C",3
"lib2","SARS-CoV-2","AAGAACAAATGGTGAG",2,48.08,10.57,-0.26,0.06,2.91,1.08,0,">1 nonsynonymous","K87R T140G T148K",3
"lib2","SARS-CoV-2","AAGAACAAATTCAGAC",7,68.48,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6W I72V K87M N157L",4
"lib2","SARS-CoV-2","AAGAACAACAGTATTA",3,38.63,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F99W K114R C150F Y178W",4
"lib2","SARS-CoV-2","AAGAACAACCATCTAA",4,13,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6A A14P C49S",3
"lib2","SARS-CoV-2","AAGAACAAGAAAAATT",9,55.8,6.14,-4.7,0.93,1.5,1.26,0.03,">1 nonsynonymous","T15N A22P T201V",3
"lib2","SARS-CoV-2","AAGAACAATAAAGTAA",4,74.97,10.76,-0.08,0.04,2.94,1.07,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","AAGAACAATCTCTTAT",1,16.18,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I2Y Y35N I88G S184W",4
"lib2","SARS-CoV-2","AAGAACAATCTGGTAA",5,111.39,9.72,-1.12,0.1,1.93,1.03,0,">1 nonsynonymous","K56V L95C",2
"lib2","SARS-CoV-2","AAGAACAATTATTGTT",8,3.22,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib2","SARS-CoV-2","AAGAACACACTATGAC",3,39.71,10.86,0.02,0.08,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAACACGACAATTC",13,177.4,10.68,-0.16,0.04,2.89,1.08,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","AAGAACACGCTATGTG",4,70.55,10.3,-0.54,0.05,2.75,1.06,0,">1 nonsynonymous","F47L A105T",2
"lib2","SARS-CoV-2","AAGAACACTAACATAG",10,30.25,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","F99G G152R",2
"lib2","SARS-CoV-2","AAGAACACTGAAGTGC",1,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G Y50L N120A G152N",4
"lib2","SARS-CoV-2","AAGAACAGGACACTTT",1,7.3,NA,NA,NA,NA,NA,0.6,">1 nonsynonymous","A81K W106Q E135N Y143I",4
"lib2","SARS-CoV-2","AAGAACAGTCAGGAAA",17,257.21,10.4,-0.44,0.05,2.92,1.02,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","AAGAACATACCAGCCA",5,70.73,9,-1.84,0.16,1.57,1.16,0.01,">1 nonsynonymous","G116M V181T",2
"lib2","SARS-CoV-2","AAGAACATAGAGATGA",14,51.15,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S41F Y121S F126I T170R",4
"lib2","SARS-CoV-2","AAGAACATAGATAAAA",3,13.27,8.69,-2.14,0.34,1.59,1.1,0.05,">1 nonsynonymous","F99H G155M",2
"lib2","SARS-CoV-2","AAGAACATTGAGTTAT",2,3.49,NA,NA,NA,NA,NA,NA,"stop","N4Y A42V F62* A81R L95V F99S W106R S129M N157L",9
"lib2","SARS-CoV-2","AAGAACATTTCTAAAT",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Y V103I F126A S147E V182Q",5
"lib2","SARS-CoV-2","AAGAACCAATTGTAGC",2,17.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F44D P149V F167K",3
"lib2","SARS-CoV-2","AAGAACCATTAGTCAG",9,61.59,9.45,-1.38,0.04,2.91,1.06,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","AAGAACCCAAAATAAG",2,25.1,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","S19R G146W F156I",3
"lib2","SARS-CoV-2","AAGAACCCACAGTAGC",19,180.08,6.35,-4.49,0.4,1.5,1.19,0.01,">1 nonsynonymous","L60I G86T V103L",3
"lib2","SARS-CoV-2","AAGAACCTAAACGACC",7,226.88,10.12,-0.72,0.06,2.57,1.03,0,">1 nonsynonymous","R16V L60H G83T",3
"lib2","SARS-CoV-2","AAGAACCTAATACTTT",4,3.14,NA,NA,NA,NA,NA,NA,"stop","A33S C49T S53* N120R S164F",5
"lib2","SARS-CoV-2","AAGAACCTGACAGCCA",5,112.5,10.84,0.01,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGAACCTTTACGGTG",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F C61V Y91V E141S E154R",5
"lib2","SARS-CoV-2","AAGAACGAAGTCCACG",2,26.22,6,-4.84,2,1.5,1.32,0.08,">1 nonsynonymous","T15S G86S R124P F134C V180S",5
"lib2","SARS-CoV-2","AAGAACGAGAGTTAGT",1,61.37,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V52M Y123C D137H Q176M",4
"lib2","SARS-CoV-2","AAGAACGAGGTCCATT",2,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R R16N N40F N92V F185S",5
"lib2","SARS-CoV-2","AAGAACGCAAGCGAAA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","AAGAACGGGCCTAATG",5,40.03,10.21,-0.62,0.05,2.8,1.05,0,">1 nonsynonymous","L57F N64L L131I",3
"lib2","SARS-CoV-2","AAGAACGGGGCTCTAA",4,141.45,10.65,-0.18,0.03,2.91,1.08,0,">1 nonsynonymous","T15K R27K L38M",3
"lib2","SARS-CoV-2","AAGAACGTGTCGCTGG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","AAGAACTAACCCATCG",4,71.23,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14Q S41R D68V C102L G117D",5
"lib2","SARS-CoV-2","AAGAACTACCTTCACT",13,130.57,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D68V Q84V P96H S184M",4
"lib2","SARS-CoV-2","AAGAACTCAGAACCCT",1,20.05,10.76,-0.08,0.07,3,1.03,0,">1 nonsynonymous","V37L S129R",2
"lib2","SARS-CoV-2","AAGAACTCGCCCAAAA",9,49.85,6.23,-4.6,0.62,1.5,1.18,0.02,">1 nonsynonymous","G83R A105K",2
"lib2","SARS-CoV-2","AAGAACTCGGCAAAAA",12,143.93,9.32,-1.52,0.05,2.34,1.09,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","AAGAACTCTTACGTAT",1,8.48,9.47,-1.36,0.21,1.93,1,0.01,">1 nonsynonymous","F12E S36Q N110S",3
"lib2","SARS-CoV-2","AAGAACTTCCTCTTTA",6,41.73,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G86R N157S S164L",3
"lib2","SARS-CoV-2","AAGAACTTGGATACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T46D I88* S129G",3
"lib2","SARS-CoV-2","AAGAACTTTTCCTAAC",1,33.45,10.75,-0.09,0.05,2.98,1.02,0,">1 nonsynonymous","P7L R27V K56E E141A P197S",5
"lib2","SARS-CoV-2","AAGAAGAAAACGCAAT",2,211.73,6.82,-4.01,0.26,1.5,1.1,0.01,">1 nonsynonymous","F12T R179H",2
"lib2","SARS-CoV-2","AAGAAGAAACCACGCG",7,36.77,6.68,-4.15,0.18,1.5,1.1,0.01,">1 nonsynonymous","L60K N120V Y143D V153K",4
"lib2","SARS-CoV-2","AAGAAGAAATAGACAA",8,203.94,9.79,-1.04,0.05,2.47,1.02,0,">1 nonsynonymous","V11W A81R T100C",3
"lib2","SARS-CoV-2","AAGAAGAAATTAGAAC",8,149.18,8.68,-2.16,0.09,2.94,1.08,0,">1 nonsynonymous","Y119F Q163N G174P",3
"lib2","SARS-CoV-2","AAGAAGAAATTAGCTA",3,113.17,10.82,-0.02,0.06,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGAAGAACACCACTG",3,38.27,9.65,-1.19,0.11,2.18,1.01,0.01,">1 nonsynonymous","Y39R F62L V77I N120L T140I",5
"lib2","SARS-CoV-2","AAGAAGAACAGTATAA",5,41.3,6.62,-4.22,0.44,1.5,1.19,0.03,">1 nonsynonymous","P7F F99L Y175F",3
"lib2","SARS-CoV-2","AAGAAGAAGAACAGAC",4,55.07,10.72,-0.11,0.04,2.95,1.06,0,">1 nonsynonymous","C61I T100C",2
"lib2","SARS-CoV-2","AAGAAGAAGCAATCGC",1,7.53,10.15,-0.68,0.17,2.75,1.13,0.02,">1 nonsynonymous","E10V S41T K56A Y123S",4
"lib2","SARS-CoV-2","AAGAAGACATACAGTG",7,149.5,10.81,-0.03,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAAGACATACGAAC",2,38.5,10.8,-0.03,0.05,2.95,1.07,0,">1 nonsynonymous","G9D K48E P96S T201A",4
"lib2","SARS-CoV-2","AAGAAGAGAAAAGCAA",14,63.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40V G86V G155V T201Q",4
"lib2","SARS-CoV-2","AAGAAGAGCATTAATA",4,17.62,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V11N A81D G146E P149S",4
"lib2","SARS-CoV-2","AAGAAGAGTGGAGTGC",7,13.22,10.26,-0.57,0.07,2.88,1.07,0,"1 nonsynonymous","E154I",1
"lib2","SARS-CoV-2","AAGAAGAGTGTGGAGT",6,49.63,10.33,-0.51,0.07,2.86,1.08,0,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","AAGAAGATATATTTGC",5,147.84,10.75,-0.09,0.05,2.9,1.12,0,">1 nonsynonymous","R16M F160S",2
"lib2","SARS-CoV-2","AAGAAGATGATAATCG",8,139.15,10.75,-0.08,0.04,2.91,1.11,0,">1 nonsynonymous","T55Q C195R",2
"lib2","SARS-CoV-2","AAGAAGATTACAATCC",10,0.71,NA,NA,NA,NA,NA,NA,"stop","N1Q A89T Y93F W106*",4
"lib2","SARS-CoV-2","AAGAAGCAAAGAAGAC",6,17.21,10.68,-0.16,0.12,2.88,1.06,0.01,"1 nonsynonymous","G83Y",1
"lib2","SARS-CoV-2","AAGAAGCAACACGCCC",10,47.95,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","N1V F47I C61Q D98L Y165A",5
"lib2","SARS-CoV-2","AAGAAGCAACATATCG",4,24.14,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","Y35T T55I G101S",3
"lib2","SARS-CoV-2","AAGAAGCACATAACAG",3,58.64,9.64,-1.19,0.08,2.16,1.04,0,">1 nonsynonymous","A14K F44C H189L S200C",4
"lib2","SARS-CoV-2","AAGAAGCATTAAATCG",2,28.13,9.37,-1.46,0.08,2.82,1.18,0,">1 nonsynonymous","F156W P169Y",2
"lib2","SARS-CoV-2","AAGAAGCCCCATTCGC",10,178.9,9.33,-1.5,0.04,2.91,1.09,0,">1 nonsynonymous","Y119Q P149L",2
"lib2","SARS-CoV-2","AAGAAGCCGGGGGCAT",6,136.49,10.88,0.04,0.04,2.92,1.07,0,">1 nonsynonymous","L122T V173F",2
"lib2","SARS-CoV-2","AAGAAGCCTCAGCAGG",10,77.65,9.45,-1.39,0.08,1.69,1.11,0,">1 nonsynonymous","N64S W106G",2
"lib2","SARS-CoV-2","AAGAAGCGACACCAGT",8,36.15,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9D D90H V103G N120L L131K",5
"lib2","SARS-CoV-2","AAGAAGCGTTGTAGTA",9,0.52,NA,NA,NA,NA,NA,NA,"stop","V32G N64R A89E L95E L111* Y178T",6
"lib2","SARS-CoV-2","AAGAAGCTAAACTCTT",9,39.44,7.81,-3.02,0.4,1.5,1,0.07,">1 nonsynonymous","N1K V37D F47W S113Y P161C",5
"lib2","SARS-CoV-2","AAGAAGCTGCACCCAT",6,76.4,10.65,-0.18,0.05,2.96,1.06,0,">1 nonsynonymous","L5W F47I",2
"lib2","SARS-CoV-2","AAGAAGCTTTAAGTTA",10,80.03,10.84,0.01,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGAAGGACATAAAAT",5,4.49,NA,NA,NA,NA,NA,NA,"stop","C49* L95M A105P",3
"lib2","SARS-CoV-2","AAGAAGGAGATCGTCA",15,217.84,10.65,-0.19,0.04,2.93,1.07,0,">1 nonsynonymous","S41E D98E",2
"lib2","SARS-CoV-2","AAGAAGGCAGCTATAA",5,25.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L T15F K56V G83S E154S S200V",6
"lib2","SARS-CoV-2","AAGAAGGCTAAGCCAG",10,0.21,NA,NA,NA,NA,NA,NA,"stop","K26S K87S K94* N107V V153Y T201L",6
"lib2","SARS-CoV-2","AAGAAGGCTATTTGAG",9,1.42,NA,NA,NA,NA,NA,NA,"stop","Q168*",1
"lib2","SARS-CoV-2","AAGAAGGGAGGGAATA",2,11.65,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P133R C158I",2
"lib2","SARS-CoV-2","AAGAAGGGCTATACAG",2,0.22,NA,NA,NA,NA,NA,NA,"stop","R25L D90P A105C F167*",4
"lib2","SARS-CoV-2","AAGAAGGGGCTGACAA",6,56.97,9.44,-1.39,0.08,1.92,1.05,0,">1 nonsynonymous","R27S V181T",2
"lib2","SARS-CoV-2","AAGAAGGTGCCTGACA",11,43.19,8.39,-2.44,0.25,1.5,1.01,0.02,">1 nonsynonymous","T55P K87S N109V F185S",4
"lib2","SARS-CoV-2","AAGAAGGTTGGTACTA",9,78.51,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N58R D68L G116I F185L",4
"lib2","SARS-CoV-2","AAGAAGTAAAGATAAT",2,42.79,10.97,0.13,0.07,2.88,1.1,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","AAGAAGTAACGGCAAT",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70T C102R A192T",3
"lib2","SARS-CoV-2","AAGAAGTACATACTTA",2,14.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D75V A89S F134M T140Y P149E C158P",6
"lib2","SARS-CoV-2","AAGAAGTATTCCTGAT",1,18.6,10.2,-0.64,0.1,2.79,1.04,0,">1 nonsynonymous","D90F I104M",2
"lib2","SARS-CoV-2","AAGAAGTCATGTTACA",6,66.64,10.02,-0.81,0.13,2.12,1,0.01,">1 nonsynonymous","D59W P96D",2
"lib2","SARS-CoV-2","AAGAAGTCGAGTGAAA",5,30.33,9.61,-1.23,0.13,2.17,1.04,0.01,">1 nonsynonymous","Y35I D98I E135K",3
"lib2","SARS-CoV-2","AAGAAGTCTAAACAAT",4,33.44,10.76,-0.07,0.04,2.93,1.08,0,"1 nonsynonymous","A42W",1
"lib2","SARS-CoV-2","AAGAAGTCTGCCATAG",2,30.12,10.52,-0.32,0.06,2.96,1.07,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","AAGAAGTTACAAGAAA",12,363.05,9.59,-1.25,0.03,2.92,1.06,0,"1 nonsynonymous","N118K",1
"lib2","SARS-CoV-2","AAGAAGTTAGTAACAA",1,97.42,10.71,-0.13,0.05,2.97,1.04,0,"1 nonsynonymous","P7M",1
"lib2","SARS-CoV-2","AAGAAGTTCGTTGGTT",1,92.5,10.8,-0.04,0.04,2.95,1.05,0,">1 nonsynonymous","I138L T148Q",2
"lib2","SARS-CoV-2","AAGAAGTTGTCGCTAC",1,111.96,9.66,-1.17,0.08,2.45,1.08,0,">1 nonsynonymous","Y35L N107A E141Y",3
"lib2","SARS-CoV-2","AAGAAGTTTGATAAAT",6,80.94,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F8I T46W G86V",3
"lib2","SARS-CoV-2","AAGAATAAAAAGAGTA",1,6.74,8.28,-2.56,0.38,1.5,1.03,0.06,">1 nonsynonymous","V77S I104W Q144S",3
"lib2","SARS-CoV-2","AAGAATAAAATAAAAT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V R25W T55F A81T T148S S164T",6
"lib2","SARS-CoV-2","AAGAATAAACTAAATG",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L N107Y I142Q",3
"lib2","SARS-CoV-2","AAGAATAAAGATTGGC",1,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","AAGAATAAAGCACCCT",4,14.71,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15G L122P T170L",3
"lib2","SARS-CoV-2","AAGAATAAAGCCAATC",6,3.23,NA,NA,NA,NA,NA,NA,"stop","A42N N107G P149R P197*",4
"lib2","SARS-CoV-2","AAGAATAAATAAAAGG",1,5.21,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9C V37S N151D S184L L187T",5
"lib2","SARS-CoV-2","AAGAATAAATCAGGTT",9,181.44,10.7,-0.14,0.03,2.94,1.05,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AAGAATAACGTAAAGT",3,12.59,10.84,0,0.05,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAATAAGCATGGTT",7,129.07,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N24R D34Q L60Q F70Y",4
"lib2","SARS-CoV-2","AAGAATAAGTGGATTA",3,50.86,10.5,-0.33,0.05,2.96,1,0,">1 nonsynonymous","A89C F134G",2
"lib2","SARS-CoV-2","AAGAATAATCAATAGC",4,118.86,8.21,-2.63,0.19,2.23,1.09,0.01,">1 nonsynonymous","V37I A42L Q176G",3
"lib2","SARS-CoV-2","AAGAATACAAGCTAAT",3,26.38,6.44,-4.4,0.49,1.5,1.05,0.02,">1 nonsynonymous","W106L S139I",2
"lib2","SARS-CoV-2","AAGAATACACAGAGAA",4,32.9,8.84,-1.99,0.08,2.63,1.11,0,">1 nonsynonymous","S36R K56Q G117Y K132R S164F",5
"lib2","SARS-CoV-2","AAGAATACACATCAGT",4,150.32,7.87,-2.97,0.17,1.69,1.08,0.01,">1 nonsynonymous","D90R S113Y",2
"lib2","SARS-CoV-2","AAGAATACACTTGCCA",3,38.93,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F12A R124S",2
"lib2","SARS-CoV-2","AAGAATACCACCACTA",3,104.64,9.81,-1.03,0.03,2.94,1.03,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","AAGAATACCACCCAAG",3,19.46,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","C31L G74P A105F G117I S200R",5
"lib2","SARS-CoV-2","AAGAATACGAAAAGGT",1,44.14,10.65,-0.18,0.05,3,1,0,">1 nonsynonymous","F62C Y121Q",2
"lib2","SARS-CoV-2","AAGAATACGCCTGGTG",7,46.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6D Y21L S43W Y119F",4
"lib2","SARS-CoV-2","AAGAATACTCTACGCG",2,25.95,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","R27M S45T V52F C61I P82N",5
"lib2","SARS-CoV-2","AAGAATAGAAGCTAGT",1,6.72,8.75,-2.09,0.43,1.56,1.06,0.04,">1 nonsynonymous","L38R E141L",2
"lib2","SARS-CoV-2","AAGAATAGACATTCGG",8,116.86,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9V F47N E76T",3
"lib2","SARS-CoV-2","AAGAATAGACGCCTCG",4,21.47,9.21,-1.63,0.11,2.14,1.01,0.01,">1 nonsynonymous","Q84H N120V T140G",3
"lib2","SARS-CoV-2","AAGAATAGCAACACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A I138L G174S",3
"lib2","SARS-CoV-2","AAGAATAGGATATACC",13,179.01,8.48,-2.35,0.05,2.66,1.06,0,">1 nonsynonymous","A18G G146K",2
"lib2","SARS-CoV-2","AAGAATAGTACGGACA",3,35.43,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G86K G146V",2
"lib2","SARS-CoV-2","AAGAATATACCAATTG",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R P7L G51P P82M N157P",5
"lib2","SARS-CoV-2","AAGAATATACGAAATC",6,30.1,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T85H K94L V103L L122E",4
"lib2","SARS-CoV-2","AAGAATATAGGCTGAT",3,36.3,6.05,-4.78,0.65,1.5,1.18,0.01,">1 nonsynonymous","W23T A81S Y175K K199P",4
"lib2","SARS-CoV-2","AAGAATATGAATTAAG",5,65.7,8.59,-2.25,0.2,1.5,1.04,0.02,">1 nonsynonymous","F8I Y91H Y178T",3
"lib2","SARS-CoV-2","AAGAATATTCTCAGAA",2,7.8,6,-4.84,2,1.5,1.07,0.07,">1 nonsynonymous","V71M I142N V173S",3
"lib2","SARS-CoV-2","AAGAATCAAAATCTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3* Q176A V181I",3
"lib2","SARS-CoV-2","AAGAATCAAACAGATT",8,164.44,9.98,-0.86,0.05,2.23,1.07,0,">1 nonsynonymous","V77L K94S",2
"lib2","SARS-CoV-2","AAGAATCAGAACGGCT",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T T55I D98E Y119M K128L",5
"lib2","SARS-CoV-2","AAGAATCATTATCAGG",1,120.07,10.8,-0.04,0.05,2.98,1.05,0,">1 nonsynonymous","Q84S D90S",2
"lib2","SARS-CoV-2","AAGAATCCAAAAATAA",10,108.79,10.83,0,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAATCCATAGTCAT",5,28.42,6,-4.84,0.81,1.5,1.13,0.01,">1 nonsynonymous","S19T L38P K56H K198P",4
"lib2","SARS-CoV-2","AAGAATCCTCATACTG",7,94.61,8.28,-2.56,0.15,1.78,1.11,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","AAGAATCTAAATGTAG",13,237.4,10.82,-0.02,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAATCTAAGCGAAA",8,159.93,6.26,-4.57,0.6,1.5,1.21,0.02,">1 nonsynonymous","S41R C150A",2
"lib2","SARS-CoV-2","AAGAATCTAGTATATA",5,19.96,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C6E N58F L125F F167L",4
"lib2","SARS-CoV-2","AAGAATCTATGGGTAT",7,60.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R D90M G152P N171H",4
"lib2","SARS-CoV-2","AAGAATCTCAAGCACA",5,82.23,8.44,-2.4,0.13,2.65,1.04,0.01,">1 nonsynonymous","Y91M Y119L",2
"lib2","SARS-CoV-2","AAGAATCTCAATGCCC",1,14.93,6,-4.84,2,1.5,1.38,0.07,">1 nonsynonymous","T3V C49Q P54R G155S",4
"lib2","SARS-CoV-2","AAGAATCTGCGCAGAT",2,12.06,11.04,0.21,0.09,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAATGAAAGCGATG",2,29.51,10.62,-0.21,0.04,2.99,1.01,0,">1 nonsynonymous","G83R D90L",2
"lib2","SARS-CoV-2","AAGAATGAACACGTGA",3,50.42,10.76,-0.08,0.06,3,1.02,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","AAGAATGAATCATCTA",1,6.53,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","A22P C102L G174L",3
"lib2","SARS-CoV-2","AAGAATGACATTAACT",3,51.83,10.88,0.04,0.08,2.92,1.08,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","AAGAATGACCGTGTAC",11,119.79,10.6,-0.23,0.04,2.91,1.1,0,">1 nonsynonymous","V37E F44I",2
"lib2","SARS-CoV-2","AAGAATGACTACATTA",2,12.73,9.65,-1.18,0.14,2.04,1.04,0.01,">1 nonsynonymous","N1P R27S K94C N120S T148M T201V",6
"lib2","SARS-CoV-2","AAGAATGCCTTTCACT",1,13.36,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L5R F12H C61P C102K",4
"lib2","SARS-CoV-2","AAGAATGCTAGTGTAA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","T63N G101Q S184*",3
"lib2","SARS-CoV-2","AAGAATGGAATTCAGT",1,1.06,NA,NA,NA,NA,NA,NA,"stop","P7* S41L T201Q",3
"lib2","SARS-CoV-2","AAGAATGGACAGACGA",4,20.07,6.19,-4.65,0.93,1.5,1.16,0.05,">1 nonsynonymous","A22I F44W N64M F99L V115E",5
"lib2","SARS-CoV-2","AAGAATGGCTCAACAT",12,101.47,10.23,-0.6,0.04,2.74,1.04,0,">1 nonsynonymous","N1L T15L",2
"lib2","SARS-CoV-2","AAGAATGGTTACCAGT",9,62.57,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N58T I72M G86R N107T Y143I G152H C158N",7
"lib2","SARS-CoV-2","AAGAATGTACCACTTA",2,23.83,10.02,-0.81,0.07,2.78,1.04,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","AAGAATGTCCCGTGCT",3,1.75,NA,NA,NA,NA,NA,NA,"stop","G86W D112N N120S K199*",4
"lib2","SARS-CoV-2","AAGAATGTGAGTAAGA",2,28,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L57P F99R E141A E154V T201L",5
"lib2","SARS-CoV-2","AAGAATGTGGTTAAGA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","W23* G51Y",2
"lib2","SARS-CoV-2","AAGAATGTTTAGACAA",4,28.33,7.85,-2.98,0.32,1.5,1,0.04,">1 nonsynonymous","A18L S53P N64R A81S F160K",5
"lib2","SARS-CoV-2","AAGAATTAACTACCTT",1,21.8,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F8I L95M Q176D",3
"lib2","SARS-CoV-2","AAGAATTAAGATATAC",4,67.52,10.81,-0.02,0.05,2.99,1.01,0,">1 nonsynonymous","D98N R136K",2
"lib2","SARS-CoV-2","AAGAATTAATACGATT",11,72.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P82G G172R",2
"lib2","SARS-CoV-2","AAGAATTAATTGCTTA",2,4.3,NA,NA,NA,NA,NA,NA,"stop","Y91* G152R G174M",3
"lib2","SARS-CoV-2","AAGAATTACGATACTA",2,6.27,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D68Q P149N C158E V180R",4
"lib2","SARS-CoV-2","AAGAATTAGACTTTTG",12,89.38,9.64,-1.19,0.1,2.22,1.11,0,">1 nonsynonymous","Y66L K87Y P96G E141A",4
"lib2","SARS-CoV-2","AAGAATTATAAAAGAG",1,12.45,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","F8S S113F",2
"lib2","SARS-CoV-2","AAGAATTATCCGCAAA",2,55.32,10.15,-0.68,0.03,3,1.01,0,">1 nonsynonymous","P7N F44Y Y143L",3
"lib2","SARS-CoV-2","AAGAATTATTCAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35M C61Y Q84* D90V",4
"lib2","SARS-CoV-2","AAGAATTCAAACTTTT",1,26.67,10.79,-0.05,0.08,2.77,1.21,0,"1 nonsynonymous","T148N",1
"lib2","SARS-CoV-2","AAGAATTCAATCTCCA",1,62.38,10.03,-0.81,0.03,2.91,1.04,0,">1 nonsynonymous","L60R P169V",2
"lib2","SARS-CoV-2","AAGAATTCATTTGGTC",8,6.66,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","T15Y D97P V103Q V181C",4
"lib2","SARS-CoV-2","AAGAATTCGGGTGCCT",5,19.56,9.66,-1.18,0.21,1.84,1,0.02,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","AAGAATTGACGTTCAA",6,30.66,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9F V37I D68L Y93C G101F",5
"lib2","SARS-CoV-2","AAGAATTTAAAGATGA",1,8.53,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P7A L57S Q144S L162E",4
"lib2","SARS-CoV-2","AAGAATTTACTAACTG",4,49.6,9.87,-0.96,0.09,2.35,1.07,0,">1 nonsynonymous","I2R G9R R27V K94Q T100M",5
"lib2","SARS-CoV-2","AAGAATTTACTGAGCA",2,58.89,10.87,0.03,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAATTTGACTAGTC",2,66.22,9.85,-0.99,0.08,1.95,1.03,0,">1 nonsynonymous","A89T P96N F160K",3
"lib2","SARS-CoV-2","AAGAATTTGTCGTAGA",7,2.44,NA,NA,NA,NA,NA,NA,"stop","C6D A81R D112* F185I",4
"lib2","SARS-CoV-2","AAGAATTTTTTAATCT",4,2.92,NA,NA,NA,NA,NA,NA,"stop","G9* K56I V115H L131E P149*",5
"lib2","SARS-CoV-2","AAGACAAAAATACCTA",2,48.1,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C6G A22E R73Y S113P",4
"lib2","SARS-CoV-2","AAGACAAAAGAAGTCG",1,29.92,10.82,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","A22M",1
"lib2","SARS-CoV-2","AAGACAAAAGCACTAA",1,51.23,8.88,-1.96,0.04,2.49,1.05,0,">1 nonsynonymous","K56L N120T Q144T S200L",4
"lib2","SARS-CoV-2","AAGACAAAAGCCTAAG",14,103.7,6.29,-4.54,0.67,1.5,1.21,0.02,">1 nonsynonymous","K87Q K94P",2
"lib2","SARS-CoV-2","AAGACAAAGATAGTTG",2,22.38,8.3,-2.54,0.35,1.5,1.03,0.03,">1 nonsynonymous","F99H N109I",2
"lib2","SARS-CoV-2","AAGACAAATCTCAGGG",14,101.81,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","AAGACAACAAACGATG",3,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T G83I D97N R127G K132I V173P",6
"lib2","SARS-CoV-2","AAGACAACCCGTGTTA",1,20.45,10.2,-0.64,0.06,3,1,0,">1 nonsynonymous","D75K F156R",2
"lib2","SARS-CoV-2","AAGACAACGGACTTCT",2,22.4,8.03,-2.8,0.13,1.98,1.09,0.01,">1 nonsynonymous","A81V D97K G146E",3
"lib2","SARS-CoV-2","AAGACAACTATAAGAA",3,83.19,10.78,-0.05,0.05,2.94,1.06,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","AAGACAACTATATAGT",6,67.59,10.09,-0.75,0.06,2.36,1.02,0,">1 nonsynonymous","L5G N30K P54R V103I A190T T201S",6
"lib2","SARS-CoV-2","AAGACAACTCGACAAG",3,11.93,7.69,-3.14,0.3,1.5,1.12,0.03,">1 nonsynonymous","I88V D98I Q144C",3
"lib2","SARS-CoV-2","AAGACAAGAAAAAGAC",4,22.53,6.61,-4.22,0.55,1.5,1.19,0.03,">1 nonsynonymous","V77L E154I P161M",3
"lib2","SARS-CoV-2","AAGACAAGAACGACAT",4,16.93,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","S45R A89R C102F",3
"lib2","SARS-CoV-2","AAGACAAGACTATTGG",11,0,NA,NA,NA,NA,NA,NA,"stop","N107* K198H",2
"lib2","SARS-CoV-2","AAGACAAGTCCTGTTT",6,87.76,10.84,0,0.04,2.96,1.05,0,"1 nonsynonymous","N151E",1
"lib2","SARS-CoV-2","AAGACAAGTGGCACAA",1,18.19,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","A14I I80L P177R",3
"lib2","SARS-CoV-2","AAGACAATAATGGATA",10,89.18,10.51,-0.33,0.06,2.82,1.12,0,"1 nonsynonymous","D59V",1
"lib2","SARS-CoV-2","AAGACAATATAGCCAG",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M F160D",2
"lib2","SARS-CoV-2","AAGACAATGTAAACAA",3,62.77,10.56,-0.28,0.03,2.95,1.04,0,"1 nonsynonymous","G155T",1
"lib2","SARS-CoV-2","AAGACAATGTAACCCA",7,0.43,NA,NA,NA,NA,NA,NA,"stop","S19* V32K G86T S113L N120A G174R",6
"lib2","SARS-CoV-2","AAGACAATTAAAACAC",7,185.27,10.05,-0.79,0.04,2.69,1.11,0,">1 nonsynonymous","Y39T T46C N58R",3
"lib2","SARS-CoV-2","AAGACAATTAAGTCTT",7,37.97,6,-4.84,2,2.89,1.3,0.01,">1 nonsynonymous","N1K A33C F70N L95V",4
"lib2","SARS-CoV-2","AAGACAATTGAATTCA",2,19.92,9.65,-1.18,0.17,2.31,1.05,0.01,">1 nonsynonymous","C6D A14P",2
"lib2","SARS-CoV-2","AAGACACACACGTTTC",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31S G146C N151S",3
"lib2","SARS-CoV-2","AAGACACACACTGTAC",7,105.07,10.09,-0.75,0.07,2.46,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGACACACCTCCATT",8,20.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43L C49V W106A",3
"lib2","SARS-CoV-2","AAGACACACTGAGGAA",1,61.67,10.75,-0.09,0.14,2.74,1.06,0,">1 nonsynonymous","K114Q T201M",2
"lib2","SARS-CoV-2","AAGACACACTGCCGAT",8,89.14,6,-4.84,1.84,1.5,1.18,0.01,">1 nonsynonymous","Q84H Y91I P133C Y143W G152I",5
"lib2","SARS-CoV-2","AAGACACCAAATTAAC",18,217.56,10.69,-0.14,0.03,2.97,1.04,0,">1 nonsynonymous","V37R K128Q E141Q S147A",4
"lib2","SARS-CoV-2","AAGACACCGGCTTTAT",4,48.36,10.75,-0.08,0.04,2.85,1.15,0,"1 nonsynonymous","R73K",1
"lib2","SARS-CoV-2","AAGACACCGTTCAATA",5,105.74,8.37,-2.47,0.13,1.98,1.09,0.01,">1 nonsynonymous","F17L K114G",2
"lib2","SARS-CoV-2","AAGACACCTAATATAC",3,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V N64L I80T",3
"lib2","SARS-CoV-2","AAGACACCTATAGTCG",3,11.63,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N64K G83D W106K S129V",4
"lib2","SARS-CoV-2","AAGACACGAATATGCA",7,29.17,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y93A G152Y",2
"lib2","SARS-CoV-2","AAGACACGGGAAAAGT",3,27.49,10.55,-0.29,0.14,2.75,1.04,0.01,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","AAGACACTATAGGTCC",3,6.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K132V T148V Y165S",3
"lib2","SARS-CoV-2","AAGACACTGGATGTGC",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R Y35K G51S F62L G83E A89L N110T P169A F185C",9
"lib2","SARS-CoV-2","AAGACAGAACTAGGAT",3,0,NA,NA,NA,NA,NA,NA,"stop","E10D F99M V115*",3
"lib2","SARS-CoV-2","AAGACAGAAGCATTCA",3,18.83,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N24K A81Y L95N",3
"lib2","SARS-CoV-2","AAGACAGAATCCAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","V11C V103* N120M",3
"lib2","SARS-CoV-2","AAGACAGCAAGATTTT",3,41.85,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","T55I G86V N151K V173F",4
"lib2","SARS-CoV-2","AAGACAGCATAACATC",5,159.46,10.65,-0.19,0.05,2.98,1.04,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AAGACAGGGAACACAA",1,7.57,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","Y35S N110V E135R E141T C150D",5
"lib2","SARS-CoV-2","AAGACAGTACTGAAAC",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90G P149S",2
"lib2","SARS-CoV-2","AAGACAGTCAATACAA",1,12.95,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","L60T V153Y P161C",3
"lib2","SARS-CoV-2","AAGACAGTGTAACCAG",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T F44S Y119F K128W",4
"lib2","SARS-CoV-2","AAGACAGTGTTCTTGA",1,72.54,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V71Y A105R P177L",3
"lib2","SARS-CoV-2","AAGACAGTTAGATACA",1,12.36,10,-0.83,0.05,2.89,1.03,0,">1 nonsynonymous","S41L C61R Y91F F134C T201N",5
"lib2","SARS-CoV-2","AAGACAGTTTTATAAT",5,0.33,NA,NA,NA,NA,NA,NA,"stop","A33* C61* N107*",3
"lib2","SARS-CoV-2","AAGACATAAGAATCAT",4,69.51,8.91,-1.93,0.09,2.13,1.13,0,">1 nonsynonymous","L38D S43N S53V",3
"lib2","SARS-CoV-2","AAGACATAATCCCAGT",9,3.13,NA,NA,NA,NA,NA,NA,"stop","E10C F62N D68* C195E K198R",5
"lib2","SARS-CoV-2","AAGACATACAAGGTAG",2,47.89,10.7,-0.14,0.05,2.98,1.02,0,">1 nonsynonymous","V37S Q84H",2
"lib2","SARS-CoV-2","AAGACATACTACCTCC",3,31.78,6.41,-4.43,0.62,1.5,1.22,0.04,">1 nonsynonymous","P7V Y35C S113C",3
"lib2","SARS-CoV-2","AAGACATACTTCCCTT",6,23.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1I N40W V77K Y91S",4
"lib2","SARS-CoV-2","AAGACATATCCAGTGG",14,77.46,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F62L L131D Q168P",3
"lib2","SARS-CoV-2","AAGACATCACATGATT",5,102.49,10.2,-0.64,0.05,2.81,1.08,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","AAGACATGGAAACAAT",1,36.33,9.1,-1.74,0.07,1.64,1.1,0,">1 nonsynonymous","V37Y F44I D137S",3
"lib2","SARS-CoV-2","AAGACATGTGTACCCG",2,27.76,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","F44L G155I L162K P169N",4
"lib2","SARS-CoV-2","AAGACATTAAATCCAA",7,91.75,8.95,-1.88,0.15,1.5,1.06,0.01,">1 nonsynonymous","S29H P82Q",2
"lib2","SARS-CoV-2","AAGACATTAGAGTGCG",13,119.54,6.38,-4.46,0.26,1.5,1.11,0,">1 nonsynonymous","D90Y P133A N157T",3
"lib2","SARS-CoV-2","AAGACATTATGCAGAA",9,58.52,9.04,-1.79,0.33,1.5,1,0.06,">1 nonsynonymous","D34R S69V G196W",3
"lib2","SARS-CoV-2","AAGACATTGAATGCTG",11,56.86,6.25,-4.59,0.67,1.5,1.13,0.02,">1 nonsynonymous","Y93F N151V V182Y",3
"lib2","SARS-CoV-2","AAGACATTGCATTAAT",8,7.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K S41P I104S",3
"lib2","SARS-CoV-2","AAGACATTTCTAGTCC",1,85.26,10.31,-0.52,0.03,2.89,1.07,0,">1 nonsynonymous","V181I V194L",2
"lib2","SARS-CoV-2","AAGACCAAAAATGAAC",2,15.05,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A33T N92E V173L",3
"lib2","SARS-CoV-2","AAGACCAAACTACTTA",1,56.65,10.25,-0.59,0.08,2.88,1.05,0,">1 nonsynonymous","S41R K128W P191G",3
"lib2","SARS-CoV-2","AAGACCAAAGATCTAT",2,0.06,NA,NA,NA,NA,NA,NA,"stop","G9S S43R D59K P133F F167* V173T",6
"lib2","SARS-CoV-2","AAGACCAAATAAAAAT",24,289.18,10.63,-0.21,0.03,2.95,1.07,0,">1 nonsynonymous","F8I N110T N130V",3
"lib2","SARS-CoV-2","AAGACCAAGAGTATCG",3,21.57,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N107D G117H E135C",3
"lib2","SARS-CoV-2","AAGACCAATAGCAAAA",4,146.61,9.06,-1.78,0.07,2.52,1.05,0,">1 nonsynonymous","N120R Q176L",2
"lib2","SARS-CoV-2","AAGACCACAAATAGTC",3,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V V71D V77K V181H",4
"lib2","SARS-CoV-2","AAGACCACAATAATGG",1,11,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A42M V65A A89F L122P",4
"lib2","SARS-CoV-2","AAGACCACTAAAGTAC",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V Q84G L95N P169R R179L",5
"lib2","SARS-CoV-2","AAGACCATATTTCGTG",6,94.59,9.8,-1.04,0.03,2.7,1.11,0,">1 nonsynonymous","A42T K48H L60F P169R",4
"lib2","SARS-CoV-2","AAGACCATGACCAAGC",2,5.28,6,-4.84,1.2,3,1,0,">1 nonsynonymous","C61K I88H",2
"lib2","SARS-CoV-2","AAGACCATGGAATAAC",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90F C102S",2
"lib2","SARS-CoV-2","AAGACCCAAAAGGAAA",1,30.72,10.15,-0.69,0.06,2.88,1.01,0,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","AAGACCCAAACCGAAC",6,111.28,7.94,-2.89,0.16,1.65,1.08,0.01,">1 nonsynonymous","L57A D98M Y119N K128H",4
"lib2","SARS-CoV-2","AAGACCCAGCATCTCC",2,13.71,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F70V T100A N109I",3
"lib2","SARS-CoV-2","AAGACCCAGGTTTAAC",1,24.33,10.72,-0.12,0.08,2.77,1.18,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","AAGACCCCACCCGGAT",2,15.65,9.85,-0.98,0.16,2.47,1.03,0.01,">1 nonsynonymous","N13D Y121Q",2
"lib2","SARS-CoV-2","AAGACCCCATTCAGTC",10,34.93,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D97T C102Y E141S",3
"lib2","SARS-CoV-2","AAGACCCGCAGAGTAG",1,8.45,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","A42N F70T S129Q Q176S",4
"lib2","SARS-CoV-2","AAGACCCTAACGAGTG",1,14.2,6,-4.84,2,1.5,1.04,0,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","AAGACCCTGTTTAGTG",10,152.02,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y39W W106T R127V T170K",4
"lib2","SARS-CoV-2","AAGACCGAACCTTACA",2,10.46,NA,NA,NA,NA,NA,NA,"stop","N4M S19*",2
"lib2","SARS-CoV-2","AAGACCGAGAGGAATC",18,54.55,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A89E T100C F160G",3
"lib2","SARS-CoV-2","AAGACCGATACTGTGA",8,124.08,10.86,0.03,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGACCGCACGTATAA",7,51.91,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A33R R136S V182W",3
"lib2","SARS-CoV-2","AAGACCGCACTGCTCT",1,41.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y39K K94I K114P I138L",4
"lib2","SARS-CoV-2","AAGACCGCGACGCCGG",21,15.82,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55R N107Y G117V",3
"lib2","SARS-CoV-2","AAGACCTACCAGTGGA",2,61.8,10.74,-0.1,0.03,3,1,0,">1 nonsynonymous","L5Y Y121H",2
"lib2","SARS-CoV-2","AAGACCTAGCCTTTTT",5,44.18,6,-4.84,1.45,1.5,1.15,0.02,">1 nonsynonymous","C49F R124S Y143N",3
"lib2","SARS-CoV-2","AAGACCTGGGACACAC",4,64.05,8.63,-2.2,0.14,2.69,1.13,0.01,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","AAGACCTTGCAAAAAT",2,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R L57Y D68T L95T E141C K199R",6
"lib2","SARS-CoV-2","AAGACGAAAAAACTCA",2,49.5,8.33,-2.51,0.13,2.01,1.03,0.01,">1 nonsynonymous","R16C R73Y",2
"lib2","SARS-CoV-2","AAGACGAAACTAAGTA",11,112.95,9.36,-1.47,0.08,2.45,1.11,0,">1 nonsynonymous","G9P Y121A",2
"lib2","SARS-CoV-2","AAGACGAAATAATAAT",8,158.23,10.27,-0.57,0.03,2.93,1.03,0,">1 nonsynonymous","Y39M N107S",2
"lib2","SARS-CoV-2","AAGACGAAGTACGTAT",4,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L F44T V52F",3
"lib2","SARS-CoV-2","AAGACGAATAAGGCAA",1,34.53,9.76,-1.07,0.14,2.36,1.05,0.01,">1 nonsynonymous","C6I V52I S108T",3
"lib2","SARS-CoV-2","AAGACGACAGAAACAA",1,16.38,6.13,-4.7,1.06,1.5,1.15,0.03,">1 nonsynonymous","L95I W106V S139F T201W",4
"lib2","SARS-CoV-2","AAGACGACATATCACT",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F V71S Y91P A105S Y119N V181R",6
"lib2","SARS-CoV-2","AAGACGACCGATAACA",8,244.69,10.79,-0.04,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGACGAGCGCGTTCT",5,26.92,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F44V G83T P96L F126S",4
"lib2","SARS-CoV-2","AAGACGCAAAGCAGCC",1,22.73,10.32,-0.52,0.12,2.73,1.02,0.01,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","AAGACGCAAAGTCATT",2,33.24,10.01,-0.82,0.07,2,1.12,0,">1 nonsynonymous","N13V N120H",2
"lib2","SARS-CoV-2","AAGACGCAATCTGCAG",1,6.33,8.45,-2.39,0.34,1.5,1.07,0.04,">1 nonsynonymous","G86K T201M",2
"lib2","SARS-CoV-2","AAGACGCCGACCAATA",4,43.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C61D I88K R179Y P197S",4
"lib2","SARS-CoV-2","AAGACGCTAAGAAACT",5,33.83,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","R124Y",1
"lib2","SARS-CoV-2","AAGACGCTGCGCCAAA",6,81.79,10.73,-0.11,0.05,2.83,1.07,0,"1 nonsynonymous","T63Y",1
"lib2","SARS-CoV-2","AAGACGGAAAAATGTT",3,13.47,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","I2W W106T T148Y V182Y",4
"lib2","SARS-CoV-2","AAGACGGAATAGATTA",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M N40R S45Q A89V E141R E154T",6
"lib2","SARS-CoV-2","AAGACGGACATCCGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8L S53W D75Q S129* G146E T170I",6
"lib2","SARS-CoV-2","AAGACGGACGCTAACT",6,27.09,6.96,-3.87,0.52,1.5,1.19,0.06,">1 nonsynonymous","T3V F99M I104A",3
"lib2","SARS-CoV-2","AAGACGGCACGGTTAC",7,72.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56S G101L S139A",3
"lib2","SARS-CoV-2","AAGACGGCATAATGTA",6,75.16,10.07,-0.77,0.03,2.99,1.01,0,">1 nonsynonymous","Y121A F160Y",2
"lib2","SARS-CoV-2","AAGACGGCCAATAGAT",13,85.14,9.8,-1.04,0.07,1.79,1.02,0,">1 nonsynonymous","S36L P96T P149S",3
"lib2","SARS-CoV-2","AAGACGGCTAAAACGA",9,0.1,NA,NA,NA,NA,NA,NA,"stop","N107* F185L",2
"lib2","SARS-CoV-2","AAGACGGCTAATCCTG",1,6.03,6.12,-4.71,2,3,1.04,0,">1 nonsynonymous","S45R Y143K",2
"lib2","SARS-CoV-2","AAGACGGTATAACCAA",9,19.13,6.08,-4.75,2,3,1.21,0.01,">1 nonsynonymous","T15W P82T D90M S113H N120W S129T",6
"lib2","SARS-CoV-2","AAGACGTAGAGAATAT",3,14.36,6.08,-4.75,0.72,1.5,1.09,0.01,">1 nonsynonymous","Y50S L57S P82S P197A",4
"lib2","SARS-CoV-2","AAGACGTATAAATGAC",3,40.41,9.7,-1.14,0.08,1.91,1.1,0,">1 nonsynonymous","V11D N58R",2
"lib2","SARS-CoV-2","AAGACTAAAAGATAAT",8,1.17,NA,NA,NA,NA,NA,NA,"stop","C6S A14N D59* L162G",4
"lib2","SARS-CoV-2","AAGACTAAAAGTACCT",3,0,NA,NA,NA,NA,NA,NA,"stop","T15* S113C Y165L",3
"lib2","SARS-CoV-2","AAGACTAACCATTCGT",8,78.83,10.49,-0.35,0.03,2.9,1.12,0,">1 nonsynonymous","V37R S129P",2
"lib2","SARS-CoV-2","AAGACTAAGCGATTCC",3,0.59,NA,NA,NA,NA,NA,NA,"stop","R16E T201*",2
"lib2","SARS-CoV-2","AAGACTAAGCGTATAA",5,28.12,6,-4.84,2,1.5,1.45,0.05,">1 nonsynonymous","C49G A89P I104S Y123T",4
"lib2","SARS-CoV-2","AAGACTACAATTTAAG",16,104.45,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D34S N118M P161I",3
"lib2","SARS-CoV-2","AAGACTACACAGAAGT",1,15.7,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V20R G51S V103T N120R",4
"lib2","SARS-CoV-2","AAGACTACGCAGATTA",2,29.76,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14F V37A F62K P82S S129N",5
"lib2","SARS-CoV-2","AAGACTACTAGCATAA",4,71.12,10.87,0.03,0.05,2.87,1.12,0,"1 nonsynonymous","T140K",1
"lib2","SARS-CoV-2","AAGACTAGCAAACCGA",12,29.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22V N92F W106L I142V",4
"lib2","SARS-CoV-2","AAGACTAGCACATACG",2,21.36,8.4,-2.44,0.32,1.5,1.14,0.05,">1 nonsynonymous","D34Q N118L",2
"lib2","SARS-CoV-2","AAGACTATACATCACG",5,105.93,10.03,-0.81,0.03,2.87,1.09,0,">1 nonsynonymous","C6F F62A T140L",3
"lib2","SARS-CoV-2","AAGACTATCGAAGCGA",5,69.16,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K48N G146L L162N A192E",4
"lib2","SARS-CoV-2","AAGACTATCTTATGGA",1,6.04,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","T46K F99Q S113L G155C",4
"lib2","SARS-CoV-2","AAGACTATTATGCTTA",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y G101F V153N F160T",4
"lib2","SARS-CoV-2","AAGACTATTCACAATA",6,19.38,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y91R P96F",2
"lib2","SARS-CoV-2","AAGACTATTTACGCTT",6,36.23,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","K87H K94L I142F F160T",4
"lib2","SARS-CoV-2","AAGACTCAACTCCTTG",9,48.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93L N120S Q168S",3
"lib2","SARS-CoV-2","AAGACTCAATCAATAA",1,13.79,10.45,-0.39,0.07,2.89,1.02,0,">1 nonsynonymous","L5K Y35L G146D",3
"lib2","SARS-CoV-2","AAGACTCAGTAAAAAA",1,10.88,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","I80P D98P G166L",3
"lib2","SARS-CoV-2","AAGACTCATAAGCTTC",6,2.06,NA,NA,NA,NA,NA,NA,"stop","A22* G196K",2
"lib2","SARS-CoV-2","AAGACTCATTGTAACC",2,32.61,10,-0.83,0.15,2.63,1.16,0.01,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","AAGACTCCAAGCTGGC",5,111.92,10.82,-0.02,0.04,2.99,1.03,0,"1 nonsynonymous","T201E",1
"lib2","SARS-CoV-2","AAGACTCCATAGACAA",3,93.38,10.22,-0.61,0.07,2.74,1.03,0,">1 nonsynonymous","F17Y F160G",2
"lib2","SARS-CoV-2","AAGACTCGACCAACTG",6,57.59,10.89,0.06,0.05,2.95,1.07,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","AAGACTCGAGTCAATC",21,306.48,10.61,-0.23,0.03,2.94,1.06,0,"1 nonsynonymous","P7M",1
"lib2","SARS-CoV-2","AAGACTCTCCATCCTC",18,199.64,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F99M A105F",2
"lib2","SARS-CoV-2","AAGACTGAAATGCACA",5,22.94,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K87D L95D",2
"lib2","SARS-CoV-2","AAGACTGACCAATGTA",1,30.63,10.9,0.06,0.05,2.94,1.07,0,">1 nonsynonymous","S43V P197K",2
"lib2","SARS-CoV-2","AAGACTGACTTAAATA",3,52.4,8.48,-2.36,0.39,1.5,1,0.05,">1 nonsynonymous","T85V V181F",2
"lib2","SARS-CoV-2","AAGACTGATACTAAAA",15,245.52,10.84,0,0.04,2.94,1.07,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","AAGACTGATTGTAAAA",3,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L Q163K V173K",3
"lib2","SARS-CoV-2","AAGACTGCACTGCCAA",10,1.96,NA,NA,NA,NA,NA,NA,"stop","T15S D97S Y175*",3
"lib2","SARS-CoV-2","AAGACTGCCTGAAATA",4,138.17,10.77,-0.07,0.05,2.84,1.12,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","AAGACTTAACCTCGAA",2,26.04,10.65,-0.19,0.05,3,1,0,">1 nonsynonymous","G9W C61S N130Q",3
"lib2","SARS-CoV-2","AAGACTTAATTATAGA",3,133.51,9.8,-1.04,0.09,1.88,1.05,0,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","AAGACTTACAAAGAAA",1,11.07,10.87,0.03,0.11,2.87,1.14,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","AAGACTTACTTTACAA",6,26.16,7.95,-2.88,0.24,1.58,1.23,0.03,"1 nonsynonymous","F185D",1
"lib2","SARS-CoV-2","AAGACTTAGATGGATA",3,13.38,6.08,-4.76,1.27,3,1.1,0,">1 nonsynonymous","A14L F126V P133H Y143F",4
"lib2","SARS-CoV-2","AAGACTTAGGCATAAA",15,229.35,10.61,-0.23,0.04,2.97,1.03,0,">1 nonsynonymous","T15V Y35V",2
"lib2","SARS-CoV-2","AAGACTTCTATATATG",5,36.36,7.56,-3.28,0.29,1.5,1.16,0.02,">1 nonsynonymous","G9S T100P",2
"lib2","SARS-CoV-2","AAGACTTGATGTAATG",6,116.07,10.85,0.01,0.05,2.94,1.07,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","AAGACTTTAGACACAC",9,100.03,10.66,-0.17,0.05,2.93,1.06,0,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","AAGACTTTCACGACGG",5,168.03,10.8,-0.03,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGACTTTCAGATACA",10,171.3,9.85,-0.99,0.06,2.03,1.06,0,">1 nonsynonymous","S36L Y91F A105V",3
"lib2","SARS-CoV-2","AAGAGAAAAATACAAG",1,38.2,10.21,-0.62,0.04,2.97,1.04,0,">1 nonsynonymous","V37E S43G K87S L122Y K132S",5
"lib2","SARS-CoV-2","AAGAGAAAAATCTAAT",1,53.79,10.77,-0.07,0.03,2.97,1.06,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","AAGAGAAAACAATGTC",8,114.21,10.78,-0.06,0.03,2.98,1.01,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","AAGAGAAACAAAAACA",2,0.58,NA,NA,NA,NA,NA,NA,"stop","K87F Y119*",2
"lib2","SARS-CoV-2","AAGAGAAACAGTTGCA",13,3.11,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib2","SARS-CoV-2","AAGAGAAACGGCTACC",4,58.25,7.93,-2.9,0.14,1.73,1.11,0.01,"1 nonsynonymous","D112F",1
"lib2","SARS-CoV-2","AAGAGAAAGAAAACTG",13,1.08,NA,NA,NA,NA,NA,NA,"stop","A14C I28* G166T",3
"lib2","SARS-CoV-2","AAGAGAAAGGAGCGAT",1,73.33,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L38Q N92V S113Q S139N Y175I",5
"lib2","SARS-CoV-2","AAGAGAAATACTCAAT",1,62.44,10.19,-0.64,0.08,2.78,1.01,0,">1 nonsynonymous","S41D K87Y R136F",3
"lib2","SARS-CoV-2","AAGAGAAATAGCCGGA",3,1.26,NA,NA,NA,NA,NA,NA,"stop","A14* C158V",2
"lib2","SARS-CoV-2","AAGAGAAATTCCCGTA",2,0.93,NA,NA,NA,NA,NA,NA,"stop","D112K T140* S147L",3
"lib2","SARS-CoV-2","AAGAGAAATTTATAGG",3,55.44,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S29T Y35R G101E A105G N157L",5
"lib2","SARS-CoV-2","AAGAGAACATAGATTC",2,18.29,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N64C N107T V181L",3
"lib2","SARS-CoV-2","AAGAGAACCTAACCCA",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G V103A P161F",3
"lib2","SARS-CoV-2","AAGAGAACCTTTAGTT",1,11.86,10.69,-0.14,0.19,3,1,0,">1 nonsynonymous","L5D N151A",2
"lib2","SARS-CoV-2","AAGAGAACGCACCAGT",5,120.07,10.83,0,0.05,2.92,1.1,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","AAGAGAACGGCCAACT",5,21.48,10.15,-0.69,0.2,1.97,1,0.02,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","AAGAGAACTCCACTCC",1,40.81,10.47,-0.37,0.06,2.87,1.01,0,">1 nonsynonymous","L122G T140P",2
"lib2","SARS-CoV-2","AAGAGAAGAATAGGAA",4,19.39,8.36,-2.48,0.34,1.5,1.07,0.04,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","AAGAGAAGCTAAATCA",8,87.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y91P Y175V",2
"lib2","SARS-CoV-2","AAGAGAAGTCCTTTCA",1,55.86,9.45,-1.38,0.1,1.95,1.02,0,">1 nonsynonymous","L38P C61G",2
"lib2","SARS-CoV-2","AAGAGAAGTTCAATTT",1,14.93,6.68,-4.16,0.56,1.5,1.3,0.04,">1 nonsynonymous","F17Q N58M Y66R",3
"lib2","SARS-CoV-2","AAGAGAATACGATACA",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L P82E V173T",3
"lib2","SARS-CoV-2","AAGAGAATTAAAAATA",3,81.95,10.48,-0.35,0.02,2.91,1.07,0,">1 nonsynonymous","G83D T100F",2
"lib2","SARS-CoV-2","AAGAGAATTAATGACA",3,30.37,6,-4.84,2,2.93,1.13,0,">1 nonsynonymous","V37W I72R T100M L122V",4
"lib2","SARS-CoV-2","AAGAGAATTAGAATGC",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","AAGAGACAATTGCATC",5,44.2,9.11,-1.73,0.05,2.81,1.06,0,">1 nonsynonymous","C61F Y119D",2
"lib2","SARS-CoV-2","AAGAGACCAACCTGCA",7,90.18,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7T G146V C158G K199T",4
"lib2","SARS-CoV-2","AAGAGACCACACTATT",2,5.53,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","E141L Q176C S184D A192S",4
"lib2","SARS-CoV-2","AAGAGACCAGTCAAAA",1,31.96,10.89,0.05,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGACCATAAACAT",6,0.39,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","AAGAGACCCTCCATGC",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23P S200F",2
"lib2","SARS-CoV-2","AAGAGACCGTAAAAAT",9,14.64,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","W23K G83I",2
"lib2","SARS-CoV-2","AAGAGACGAGAATTAC",1,18.56,7.62,-3.22,0.39,1.5,1.09,0.03,">1 nonsynonymous","P82T K87T P133G G174R",4
"lib2","SARS-CoV-2","AAGAGACTCCAACTGC",1,13.7,9.6,-1.24,0.08,3,1.01,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","AAGAGACTCCATGTCC",7,43.9,9.19,-1.65,0.42,1.5,1,0.08,">1 nonsynonymous","T55C C102S Q176C",3
"lib2","SARS-CoV-2","AAGAGACTTCAGGGAT",7,45.9,10.04,-0.79,0.09,2.59,1.09,0,">1 nonsynonymous","L5C L38W D59S",3
"lib2","SARS-CoV-2","AAGAGAGACACAGGCT",1,39.31,10.86,0.02,0.08,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGAGAGGCCCGTT",3,85.59,10.82,-0.01,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGAGAGTACGCTT",2,28.16,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","E10P F70E",2
"lib2","SARS-CoV-2","AAGAGAGCAAGAACCC",15,115.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20I D137S",2
"lib2","SARS-CoV-2","AAGAGAGCACTGGGGG",7,22.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19L T85I V103H V115M L125H V194I",6
"lib2","SARS-CoV-2","AAGAGAGCCCTAGTCT",5,71.41,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y91H D112S D137C",3
"lib2","SARS-CoV-2","AAGAGAGGTGATAGTG",2,33.21,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A14L N92K",2
"lib2","SARS-CoV-2","AAGAGAGTAATACACC",2,81.31,8.14,-2.69,0.11,2.42,1.05,0,">1 nonsynonymous","V32L S45D T55L R73G G174M",5
"lib2","SARS-CoV-2","AAGAGAGTAATTGCAG",2,15.57,10.62,-0.21,0.05,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGAGTATAAAAGT",4,0.99,NA,NA,NA,NA,NA,NA,"stop","F47T R73* A105K",3
"lib2","SARS-CoV-2","AAGAGATACATCAGAT",1,32.19,6,-4.84,1.14,1.5,1.17,0.02,">1 nonsynonymous","K94T I142N C150R P169S G174Q",5
"lib2","SARS-CoV-2","AAGAGATAGATTATTT",4,26.46,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G9K Y93P",2
"lib2","SARS-CoV-2","AAGAGATATCGTTATG",3,86.3,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G86C G117V",2
"lib2","SARS-CoV-2","AAGAGATCAACTAGTT",17,259.66,10.83,-0.01,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGATGACTGGATC",4,30.2,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","D68G G86R L95Q I142L G155I",5
"lib2","SARS-CoV-2","AAGAGATGCATTAAAG",8,8.3,NA,NA,NA,NA,NA,NA,"stop","N13S C49F V71* K87T S129L P133S Q163K",7
"lib2","SARS-CoV-2","AAGAGATGTGCATCCG",4,66.07,10.7,-0.13,0.03,2.91,1.1,0,">1 nonsynonymous","G9S D90S",2
"lib2","SARS-CoV-2","AAGAGATTAAGCGAAC",4,58.1,8.2,-2.64,0.14,1.78,1.08,0.01,">1 nonsynonymous","L60S Q84A K128E P161M",4
"lib2","SARS-CoV-2","AAGAGATTAATAGTCA",6,176.58,10.68,-0.16,0.02,2.93,1.09,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","AAGAGATTATTCTGCA",5,58.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y N30S L162S",3
"lib2","SARS-CoV-2","AAGAGATTGAATATAA",4,19.15,10.33,-0.5,0.14,2.44,1,0.01,">1 nonsynonymous","T15L I104F P149W",3
"lib2","SARS-CoV-2","AAGAGATTGCGACAAA",1,8.62,8.78,-2.05,0.46,1.65,1.1,0.05,"1 nonsynonymous","V20G",1
"lib2","SARS-CoV-2","AAGAGCAAACTCGATG",6,41.3,6.3,-4.54,0.46,1.5,1.08,0.01,">1 nonsynonymous","R27L I88S P133T",3
"lib2","SARS-CoV-2","AAGAGCAAGTGAAAAT",10,124.97,10.79,-0.04,0.05,2.91,1.11,0,"1 nonsynonymous","K199E",1
"lib2","SARS-CoV-2","AAGAGCAATATCAGAC",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I L57T Y123W V180T",4
"lib2","SARS-CoV-2","AAGAGCAATATTCTCT",2,87.97,10.74,-0.09,0.04,2.88,1.11,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","AAGAGCAATGCGTGGG",7,55.46,8.38,-2.46,0.1,2.26,1.04,0,">1 nonsynonymous","N118V I138R T170Q",3
"lib2","SARS-CoV-2","AAGAGCAATTAACAAC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AAGAGCACCCGCTAGA",5,19.41,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F17T L60Y A89M",3
"lib2","SARS-CoV-2","AAGAGCACTATTTTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G L57R Y93H",3
"lib2","SARS-CoV-2","AAGAGCAGACTGGAAG",3,8.85,6.28,-4.55,0.46,3,1.06,0.01,">1 nonsynonymous","L5T A14Y A22H C158W T201M",5
"lib2","SARS-CoV-2","AAGAGCAGATTCAGCC",4,10.92,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40A Y50N K56G E141G P191T",5
"lib2","SARS-CoV-2","AAGAGCAGGAGTGCTA",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P P161T",2
"lib2","SARS-CoV-2","AAGAGCCAAACACGAC",3,46.09,10.69,-0.15,0.03,2.94,1.08,0,">1 nonsynonymous","Y35L F47W",2
"lib2","SARS-CoV-2","AAGAGCCAACATAACC",10,1.23,NA,NA,NA,NA,NA,NA,"stop","F99A Y123A C158* G166N",4
"lib2","SARS-CoV-2","AAGAGCCATGAAACAG",2,17.62,10,-0.83,0.11,2.81,1.07,0.01,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","AAGAGCCCCATAACCC",8,21.72,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63L G101M",2
"lib2","SARS-CoV-2","AAGAGCTAATACATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2R G9* T15V S36* Y39L P54F",6
"lib2","SARS-CoV-2","AAGAGCTAGATTGTAA",1,16.31,9.85,-0.99,0.13,2.58,1.1,0.01,">1 nonsynonymous","L5V R16L S41L T100R P149I",5
"lib2","SARS-CoV-2","AAGAGCTATTCGAATT",3,16.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19K C61G P149H",3
"lib2","SARS-CoV-2","AAGAGCTCGACAACGG",4,10.55,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F8V D68V D97I L125R",4
"lib2","SARS-CoV-2","AAGAGCTGAAACGCCT",1,14.42,6.21,-4.62,1.26,1.5,1.14,0.05,">1 nonsynonymous","N13L S19L K48S C61W G101L G196V",6
"lib2","SARS-CoV-2","AAGAGCTGGCATATGA",3,21.1,10.76,-0.08,0.11,2.87,1.03,0.01,"1 nonsynonymous","K48S",1
"lib2","SARS-CoV-2","AAGAGCTTAGCCGAAC",3,25.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24G K48F N64A G86N Y121Q V173L",6
"lib2","SARS-CoV-2","AAGAGCTTATAGATTT",2,35.01,10.36,-0.47,0.03,2.93,1.08,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","AAGAGGAAAATGCCCA",11,73.18,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C6Y I80Q D90C",3
"lib2","SARS-CoV-2","AAGAGGAACTATGCCG",1,7.41,6.07,-4.76,2,1.5,1.24,0.05,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","AAGAGGAAGATTCTTG",1,0.53,NA,NA,NA,NA,NA,NA,"stop","Y35* P54T K128P A190I",4
"lib2","SARS-CoV-2","AAGAGGAAGTAACAAT",5,1.9,NA,NA,NA,NA,NA,NA,"stop","L57* G83M",2
"lib2","SARS-CoV-2","AAGAGGAGGTTTAAAC",9,181.25,10.77,-0.06,0.04,2.94,1.07,0,">1 nonsynonymous","K94R L188K",2
"lib2","SARS-CoV-2","AAGAGGATTACATAAT",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L57H",1
"lib2","SARS-CoV-2","AAGAGGCAGATCGATG",2,3.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","AAGAGGCCAGCCCATT",15,160.32,9.9,-0.93,0.04,2.44,1.06,0,">1 nonsynonymous","C61W A81M",2
"lib2","SARS-CoV-2","AAGAGGCCGAATGCAG",1,11.78,10.96,0.12,0.08,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGGCTAAAATACG",3,12.13,10.22,-0.62,0.09,2.89,1,0.01,">1 nonsynonymous","S43V Y178L",2
"lib2","SARS-CoV-2","AAGAGGCTTAAGCGAT",7,52.32,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L38S A105G R136P",3
"lib2","SARS-CoV-2","AAGAGGCTTGTCACCG",3,20.75,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L95Y E141R P149S",3
"lib2","SARS-CoV-2","AAGAGGGAAGCACGAC",4,27.59,8.59,-2.25,0.12,1.86,1.08,0,">1 nonsynonymous","D59R Y66V N118R K128M",4
"lib2","SARS-CoV-2","AAGAGGGATTACACTT",14,2.84,NA,NA,NA,NA,NA,NA,"stop","K87* G101A G196Y",3
"lib2","SARS-CoV-2","AAGAGGGCATTACGCC",1,46.76,8.69,-2.14,0.16,2.82,1.25,0.02,">1 nonsynonymous","Y35M K87L Y119G Y178T",4
"lib2","SARS-CoV-2","AAGAGGGGAATGCAAA",7,30.52,10.22,-0.62,0.05,2.92,1.02,0,">1 nonsynonymous","A42R K56R P161S K198L",4
"lib2","SARS-CoV-2","AAGAGGGGTGCTTCAT",2,18.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K94T N171Y",2
"lib2","SARS-CoV-2","AAGAGGGTTAGACACA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","V115G G146*",2
"lib2","SARS-CoV-2","AAGAGGTAATACAATC",3,20.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R Y178F",2
"lib2","SARS-CoV-2","AAGAGGTAATGTATGT",4,24.02,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","C6V N40M F47S K56W V103T",5
"lib2","SARS-CoV-2","AAGAGGTCCGCAATAC",2,35.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S S36I S45A",3
"lib2","SARS-CoV-2","AAGAGGTGCAATAAGT",3,26.75,10.62,-0.21,0.16,2.24,1.02,0.01,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","AAGAGGTGCAGATCAT",11,84.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G74C I104S F134W",3
"lib2","SARS-CoV-2","AAGAGTAAATAAGAGG",8,73.33,6,-4.84,1.48,1.6,1.12,0,">1 nonsynonymous","Q84K L131R",2
"lib2","SARS-CoV-2","AAGAGTAAGACACACT",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43H A105R Y119S S129A F185L",5
"lib2","SARS-CoV-2","AAGAGTACACCCAAAA",3,35,10.61,-0.23,0.04,2.97,1.05,0,">1 nonsynonymous","Y39G T201I",2
"lib2","SARS-CoV-2","AAGAGTACCAGGATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12M G83D R136* N157T V173N",5
"lib2","SARS-CoV-2","AAGAGTACTGCGCCAT",3,0.18,NA,NA,NA,NA,NA,NA,"stop","T85R N109K N118* S129R",4
"lib2","SARS-CoV-2","AAGAGTACTTTCAACG",2,27.51,8.7,-2.14,0.11,2,1.03,0,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","AAGAGTAGCTAAACTA",1,36.68,7.95,-2.89,0.21,1.5,1,0.01,">1 nonsynonymous","R27E Y35V N107L T148V",4
"lib2","SARS-CoV-2","AAGAGTAGTATAAATC",6,3.68,NA,NA,NA,NA,NA,NA,"stop","N13R N107A R136D Y143T C158*",5
"lib2","SARS-CoV-2","AAGAGTATCTATAGCA",2,10.28,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","AAGAGTATGCGAGTTT",17,62.64,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G51R Q84N A89W E135W",4
"lib2","SARS-CoV-2","AAGAGTATGCTATCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53G R124T A190G",3
"lib2","SARS-CoV-2","AAGAGTATTAAGGTAT",2,7.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G N130S G166S",3
"lib2","SARS-CoV-2","AAGAGTATTATTTATA",2,38.76,9.92,-0.92,0.1,2.11,1.02,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","AAGAGTCAAAAGGTAA",11,246.6,10.49,-0.34,0.05,2.92,1.05,0,">1 nonsynonymous","T85Q D98P",2
"lib2","SARS-CoV-2","AAGAGTCAAATTACAT",1,0.54,NA,NA,NA,NA,NA,NA,"stop","F44Q F134R T201*",3
"lib2","SARS-CoV-2","AAGAGTCAGAACGCCA",4,1.55,NA,NA,NA,NA,NA,NA,"stop","N1* N13Y I28G G86F Y91L F167M",6
"lib2","SARS-CoV-2","AAGAGTCCATCAAGGA",5,49.71,10.43,-0.4,0.06,2.84,1.1,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","AAGAGTCCGAGATTCT",3,19.73,6.06,-4.78,0.68,2.68,1.13,0.01,">1 nonsynonymous","A105R R127E",2
"lib2","SARS-CoV-2","AAGAGTGAAAATCTAC",4,50.11,10,-0.84,0.09,2.14,1.06,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","AAGAGTGACATGACAC",1,14.15,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N1I F44K V52M N107T",4
"lib2","SARS-CoV-2","AAGAGTGCCCCTAACA",2,16.33,9.89,-0.95,0.18,2.22,1.13,0.01,">1 nonsynonymous","T100G K132A",2
"lib2","SARS-CoV-2","AAGAGTTAAACAATCG",2,19.32,7.41,-3.42,0.5,1.5,1.12,0.07,">1 nonsynonymous","N4I P82L P96L W106R C158R Y175S",6
"lib2","SARS-CoV-2","AAGAGTTAAATTTGTC",13,255.8,10.85,0.01,0.06,2.88,1.13,0,">1 nonsynonymous","P7N N110Q",2
"lib2","SARS-CoV-2","AAGAGTTCCAGATAAC",2,31.2,6.6,-4.23,0.34,1.5,1.04,0.02,">1 nonsynonymous","T55N D112E D137V",3
"lib2","SARS-CoV-2","AAGAGTTCCTTCATAG",16,155.35,10.73,-0.1,0.04,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGAGTTCTAAATACT",7,35.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6V F62S G74C K87V Y93W R124P Q144L",7
"lib2","SARS-CoV-2","AAGAGTTCTTTCAAAT",7,187.28,10.02,-0.82,0.05,2.7,1.03,0,">1 nonsynonymous","F12L G152L",2
"lib2","SARS-CoV-2","AAGAGTTGGTAATAGA",3,18.13,9.27,-1.57,0.06,1.89,1.01,0,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","AAGAGTTTACGCAACG",7,211.19,10.28,-0.55,0.04,2.94,1.01,0,">1 nonsynonymous","R27W G83M",2
"lib2","SARS-CoV-2","AAGAGTTTTGATGAGG",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M A105Y F156L",3
"lib2","SARS-CoV-2","AAGATAAAAACCACGA",5,33.74,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G9V S45P F70R Q168P",4
"lib2","SARS-CoV-2","AAGATAAAAATCAACT",6,25.24,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","G117C Y165V",2
"lib2","SARS-CoV-2","AAGATAAAAGCAGCTT",8,79.84,11.03,0.19,0.05,2.89,1.1,0,">1 nonsynonymous","G9V Q163V",2
"lib2","SARS-CoV-2","AAGATAAATGATAGTC",9,122.15,10.34,-0.5,0.04,2.88,1.11,0,">1 nonsynonymous","L57I N110V",2
"lib2","SARS-CoV-2","AAGATAAATGCTAGAA",6,56.52,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","C6L L38S G51V R73S T201G",5
"lib2","SARS-CoV-2","AAGATAAATGGCCCAA",14,60.48,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F99A W106Q R124K L162T",4
"lib2","SARS-CoV-2","AAGATAACAAGCGAAC",15,253.9,10.1,-0.73,0.05,2.64,1.01,0,">1 nonsynonymous","R27T D90V",2
"lib2","SARS-CoV-2","AAGATAACACAATATG",1,27.18,10.36,-0.48,0.06,2.91,1.04,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","AAGATAACACCCTGCC",2,9.57,6,-4.84,1.13,3,1.02,0,">1 nonsynonymous","Y93A P149N",2
"lib2","SARS-CoV-2","AAGATAACATAATTTC",1,54.18,8.26,-2.57,0.23,1.5,1.02,0.02,">1 nonsynonymous","Y91N Q176L",2
"lib2","SARS-CoV-2","AAGATAACGAGATAAT",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y T63S G86L W106R P133I G155Y",6
"lib2","SARS-CoV-2","AAGATAACGCTCATAT",11,130.67,10.84,0,0.05,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGATAACTCCTCAGC",1,21.08,10.58,-0.26,0.07,2.8,1.18,0,">1 nonsynonymous","L5K Q163W",2
"lib2","SARS-CoV-2","AAGATAACTTCAAATC",2,33.16,6.47,-4.37,0.22,2.33,1.08,0,">1 nonsynonymous","A42V Y159E",2
"lib2","SARS-CoV-2","AAGATAAGTGAGAGTG",3,9.77,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V37L L95Y K114E",3
"lib2","SARS-CoV-2","AAGATAATAACACTAA",9,77.47,10.95,0.11,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATAATACACCTCC",1,13.9,6.51,-4.33,1.05,1.5,1.11,0.04,">1 nonsynonymous","T3L R124G L131K E141V",4
"lib2","SARS-CoV-2","AAGATAATGTGTCCGC",2,16.43,10.55,-0.29,0.07,2.97,1,0,">1 nonsynonymous","L5P D90H K114T V173I",4
"lib2","SARS-CoV-2","AAGATAATTAAATAAT",6,0,NA,NA,NA,NA,NA,NA,"stop","N13A V37R P96* D112L",4
"lib2","SARS-CoV-2","AAGATAATTATGCCAA",4,37.2,7.14,-3.69,0.19,2.22,1.23,0.01,">1 nonsynonymous","G9F C158R",2
"lib2","SARS-CoV-2","AAGATAATTGCTCTGG",1,9.13,6.75,-4.08,0.67,1.5,1.07,0.01,">1 nonsynonymous","T85Y Q144T Y178R",3
"lib2","SARS-CoV-2","AAGATAATTTGAAGCC",4,88.96,10.71,-0.12,0.04,2.89,1.1,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","AAGATACAAAGTTTAC",1,11.53,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","I2C G9A G86E D90T D98C Y121N F167Q C195L",8
"lib2","SARS-CoV-2","AAGATACACCAAAACG",12,186.4,10.76,-0.08,0.04,2.96,1.03,0,"1 nonsynonymous","F62T",1
"lib2","SARS-CoV-2","AAGATACACGATATGA",2,15.17,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","S41T K94E D137V G146I F185E",5
"lib2","SARS-CoV-2","AAGATACAGAACGGGA",5,93.66,10.47,-0.37,0.04,2.91,1.08,0,">1 nonsynonymous","K87H I138G",2
"lib2","SARS-CoV-2","AAGATACCAAGAACAG",5,18.31,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86S D98V",2
"lib2","SARS-CoV-2","AAGATACGAAACACTC",12,0.02,NA,NA,NA,NA,NA,NA,"stop","N40Y S53* L95I N130R",4
"lib2","SARS-CoV-2","AAGATACGCGTACAAT",8,185.93,9.4,-1.43,0.03,2.9,1.08,0,">1 nonsynonymous","F62M Y119S",2
"lib2","SARS-CoV-2","AAGATACGTTAGGAAC",10,134.43,10.72,-0.12,0.03,2.95,1.05,0,">1 nonsynonymous","V37G K128N N151S",3
"lib2","SARS-CoV-2","AAGATACTAAATTCAC",16,81.35,6,-4.84,2,3,1.12,0,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","AAGATACTAGATCGTT",1,17.64,9.7,-1.14,0.19,2.46,1,0.02,"1 nonsynonymous","V20S",1
"lib2","SARS-CoV-2","AAGATACTATGGGTGC",2,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S F44W D68L Q144V",4
"lib2","SARS-CoV-2","AAGATACTCAACATCT",1,46.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3N L38N V77R N120Q E154M P169T Y178L",7
"lib2","SARS-CoV-2","AAGATACTCTTCCACA",2,51.36,10.75,-0.08,0.05,2.84,1.16,0,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","AAGATACTGCATCTAA",2,27.18,10.1,-0.74,0.08,2.86,1.06,0,">1 nonsynonymous","C31L S200F",2
"lib2","SARS-CoV-2","AAGATACTTAACGTCT",3,98.92,10.66,-0.18,0.03,2.99,1.02,0,">1 nonsynonymous","P133G K199M",2
"lib2","SARS-CoV-2","AAGATACTTATAGTGA",5,69.51,10.65,-0.19,0.05,2.92,1.07,0,">1 nonsynonymous","R16Y G116A L122V",3
"lib2","SARS-CoV-2","AAGATAGACCTATCCA",1,79.52,9.73,-1.11,0.04,2.96,1.03,0,">1 nonsynonymous","I142A C195S",2
"lib2","SARS-CoV-2","AAGATAGCCATGATGT",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T D112M",2
"lib2","SARS-CoV-2","AAGATAGCCCGACGCG",3,119.02,10.46,-0.37,0.04,2.9,1.09,0,">1 nonsynonymous","G51R I142T",2
"lib2","SARS-CoV-2","AAGATAGCGAATACCA",8,74.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37L L95P A145F",3
"lib2","SARS-CoV-2","AAGATAGCTAGCCTAC",1,22.15,9.28,-1.56,0.12,1.85,1.07,0.01,">1 nonsynonymous","A14L W106S",2
"lib2","SARS-CoV-2","AAGATAGGTAGCATCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H T15R F99A S164V",4
"lib2","SARS-CoV-2","AAGATAGGTCCAGAAG",5,70.59,9.03,-1.81,0.11,2.62,1.19,0,">1 nonsynonymous","S36C F156I G174L",3
"lib2","SARS-CoV-2","AAGATAGTACGATTGC",7,31.88,8.58,-2.25,0.08,2.85,1.04,0,">1 nonsynonymous","N120M Y143E",2
"lib2","SARS-CoV-2","AAGATAGTGTAAAGTC",8,85.15,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","R16G A22V R73G N151Y N157C V181F",6
"lib2","SARS-CoV-2","AAGATAGTTGATAACA",1,2.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","AAGATAGTTTTTGAAT",1,6.42,10.75,-0.09,0.14,2.85,1.19,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","AAGATATAAATAATGG",4,17.66,10.87,0.04,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATATAAGAAATAG",2,38.66,9.06,-1.77,0.17,1.5,1.07,0.02,">1 nonsynonymous","S53G K94Y",2
"lib2","SARS-CoV-2","AAGATATACACCTCGT",5,26.45,10.65,-0.18,0.05,2.99,1.02,0,">1 nonsynonymous","T3L S129A",2
"lib2","SARS-CoV-2","AAGATATACGAACCAC",2,1.88,NA,NA,NA,NA,NA,NA,"stop","K26* P54F",2
"lib2","SARS-CoV-2","AAGATATACTACTTGA",1,27.58,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T140L Y175I T201I",3
"lib2","SARS-CoV-2","AAGATATATGGATGCC",3,38.6,10.74,-0.09,0.07,2.96,1.03,0,">1 nonsynonymous","A42P L60C",2
"lib2","SARS-CoV-2","AAGATATCCACGAAAT",1,164.92,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S43M N110D P149S V153A Q176P",5
"lib2","SARS-CoV-2","AAGATATCTCAAAATC",1,9.44,6,-4.84,2,1.5,1.09,0.05,">1 nonsynonymous","G9R F47S A89F L95R P133T C150K",6
"lib2","SARS-CoV-2","AAGATATCTGGACCAA",2,14.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D59Y Y93K V103A",3
"lib2","SARS-CoV-2","AAGATATGAAGGAGAT",2,9.23,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","Y50R D90W V103I T140W",4
"lib2","SARS-CoV-2","AAGATATGCAATGAAG",5,31.27,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D97S Y121T Y143C P149R E154Q",5
"lib2","SARS-CoV-2","AAGATATTCCCTCGCC",8,70.23,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","L95W A105M",2
"lib2","SARS-CoV-2","AAGATATTTAGCCGTG",2,75.27,10.04,-0.8,0.04,2.96,1.03,0,">1 nonsynonymous","S43D L125S",2
"lib2","SARS-CoV-2","AAGATATTTTCAGGGT",3,69.36,10.75,-0.09,0.05,2.87,1.12,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","AAGATCAACAAATGAT",8,32.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N92L I138Q",2
"lib2","SARS-CoV-2","AAGATCAACAATGACG",7,129.61,10.79,-0.05,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATCAATAACTGTG",8,64.29,6,-4.84,1.85,1.5,1.21,0.01,">1 nonsynonymous","N4E P161I",2
"lib2","SARS-CoV-2","AAGATCAATTCACCTA",5,91.28,10.9,0.06,0.05,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGATCACCCGAGTGC",5,104.88,10.88,0.05,0.06,2.91,1.11,0,"1 nonsynonymous","L122H",1
"lib2","SARS-CoV-2","AAGATCACCGTAACCC",4,38.78,9.04,-1.79,0.05,2.93,1.07,0,">1 nonsynonymous","S36R K56I Y119E",3
"lib2","SARS-CoV-2","AAGATCATAACCAGAA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","F8* S129T",2
"lib2","SARS-CoV-2","AAGATCATATACCGGT",12,5.02,NA,NA,NA,NA,NA,NA,"stop","A33T F44L K48* Q84H C102P",5
"lib2","SARS-CoV-2","AAGATCATGAGGATAA",10,70.02,9.18,-1.66,0.16,1.89,1.09,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","AAGATCCAAAGGCTTA",6,18.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C102P K198I",2
"lib2","SARS-CoV-2","AAGATCCAAATACACC",1,48.23,10.16,-0.68,0.05,2.88,1.02,0,">1 nonsynonymous","D98F S139D",2
"lib2","SARS-CoV-2","AAGATCCATGAAACTT",1,7.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K D112L",2
"lib2","SARS-CoV-2","AAGATCCCAAGTACTA",4,25.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R25L L95Y I104L",3
"lib2","SARS-CoV-2","AAGATCCCAATTGAAA",5,44.03,10.65,-0.19,0.03,2.95,1.04,0,">1 nonsynonymous","L60T N110R E154R",3
"lib2","SARS-CoV-2","AAGATCCCTTTTTCTT",6,109.38,10.97,0.13,0.04,2.94,1.07,0,">1 nonsynonymous","C61T L122K",2
"lib2","SARS-CoV-2","AAGATCCGCGTAAGAA",1,30.81,9.58,-1.26,0.11,2.28,1.05,0.01,">1 nonsynonymous","A81D F160V",2
"lib2","SARS-CoV-2","AAGATCCGCGTCTTCG",9,143.64,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y123P L131R G155R",3
"lib2","SARS-CoV-2","AAGATCCTAAGAATAC",10,203.58,10.88,0.05,0.07,2.91,1.03,0,"1 nonsynonymous","A192M",1
"lib2","SARS-CoV-2","AAGATCCTACAGACAG",11,199.02,10.82,-0.02,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATCCTGATAGCAG",1,15.96,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V103M L122F S139V P149Q Y159C V181M",6
"lib2","SARS-CoV-2","AAGATCGAAAAAATAC",17,56.14,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","A14K V20S A81V P96V I142R",5
"lib2","SARS-CoV-2","AAGATCTAAACGTTCT",6,86.34,10.73,-0.11,0.05,2.85,1.07,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","AAGATCTATAGCTGAA",7,5.39,NA,NA,NA,NA,NA,NA,"stop","D90Y K114E S129* A145G",4
"lib2","SARS-CoV-2","AAGATCTATCAGTCAA",1,15.35,7.54,-3.29,0.4,1.96,1.2,0.05,">1 nonsynonymous","C61T Y175D",2
"lib2","SARS-CoV-2","AAGATCTATCGAGAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A Y35N G152F",3
"lib2","SARS-CoV-2","AAGATCTATTGCATAA",5,78.47,10.84,0,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATCTCATTCTCAG",3,34,9.35,-1.48,0.1,1.99,1.04,0.01,">1 nonsynonymous","C6Y L57T",2
"lib2","SARS-CoV-2","AAGATCTCTCATGCAA",3,6.02,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3R T15R F44L D98F G166T",5
"lib2","SARS-CoV-2","AAGATCTGCCACGAAT",6,29.76,6.08,-4.76,1.02,1.5,1.16,0.02,">1 nonsynonymous","L57Y P96T R136Y N151T",4
"lib2","SARS-CoV-2","AAGATCTGGACAAAAT",1,57.63,9.96,-0.87,0.06,2.77,1.03,0,">1 nonsynonymous","V11A N40D K56E L122Y",4
"lib2","SARS-CoV-2","AAGATCTTACAAGTCT",3,1.12,NA,NA,NA,NA,NA,NA,"stop","V115* F134M P169S",3
"lib2","SARS-CoV-2","AAGATCTTACGAGCAT",2,6.86,6.78,-4.06,1.07,1.55,1.17,0.07,">1 nonsynonymous","L57A V103S P197T",3
"lib2","SARS-CoV-2","AAGATCTTGACGAATG",6,43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129T D137R",2
"lib2","SARS-CoV-2","AAGATCTTTGATGCTA",13,118.37,10.78,-0.06,0.04,2.94,1.06,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AAGATCTTTTTATATA",4,15.31,7.99,-2.85,0.48,1.5,1,0.07,">1 nonsynonymous","F12L P82S",2
"lib2","SARS-CoV-2","AAGATGAACAATAGGA",1,8.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61T G74L S164L",3
"lib2","SARS-CoV-2","AAGATGAACACATTAT",4,53.87,10.12,-0.71,0.05,2.83,1.1,0,">1 nonsynonymous","E10N D34C",2
"lib2","SARS-CoV-2","AAGATGAAGTTCGGTC",7,40.74,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A22R F44H R136K Y165T P197G",5
"lib2","SARS-CoV-2","AAGATGAATAGAAATG",5,32.09,10.35,-0.48,0.12,2.78,1.09,0.01,">1 nonsynonymous","A14V V37L",2
"lib2","SARS-CoV-2","AAGATGAATTTAATTG",9,54.15,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P7W T85L D137Y",3
"lib2","SARS-CoV-2","AAGATGACAGGTTGCA",5,44.44,10.86,0.02,0.09,2.78,1.09,0,"1 nonsynonymous","V52I",1
"lib2","SARS-CoV-2","AAGATGACCCTTCAGG",6,56.24,8.79,-2.04,0.15,1.81,1.13,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","AAGATGACTGTGTACG",3,26.3,9.63,-1.21,0.11,2.11,1.07,0.01,">1 nonsynonymous","V11F R16E A105V",3
"lib2","SARS-CoV-2","AAGATGAGAAAAAAGC",4,55.06,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T15S I28S L60A N107S G196F",5
"lib2","SARS-CoV-2","AAGATGAGTAAGAGAA",5,25.33,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T15R F47W D97E G172Y",4
"lib2","SARS-CoV-2","AAGATGATAACCCAAA",3,25.84,8.54,-2.3,0.11,2.17,1.05,0,">1 nonsynonymous","F47R T170M",2
"lib2","SARS-CoV-2","AAGATGATCTTAGACT",6,81.88,6.23,-4.61,0.53,1.5,1.12,0.01,">1 nonsynonymous","G86L N92W Q168L",3
"lib2","SARS-CoV-2","AAGATGATGCTTACAA",5,159.7,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L5F S164F P177L",3
"lib2","SARS-CoV-2","AAGATGATTTATATTT",2,136.87,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","E10A I142A Q176R",3
"lib2","SARS-CoV-2","AAGATGCAGCAAAACA",3,64.35,10.72,-0.12,0.07,2.93,1.1,0,">1 nonsynonymous","T85R G116E",2
"lib2","SARS-CoV-2","AAGATGCATGCAACAT",4,82.72,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10L G86V",2
"lib2","SARS-CoV-2","AAGATGCCATTATAGG",3,53.67,10.85,0.01,0.09,2.79,1.24,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATGCGAACTAGCA",3,84.63,10.12,-0.72,0.04,2.67,1.04,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AAGATGCTAAATATGG",14,54.42,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5G A18P S45C F47L G101C",5
"lib2","SARS-CoV-2","AAGATGCTCCTGAAAA",6,0.16,NA,NA,NA,NA,NA,NA,"stop","N13I R127*",2
"lib2","SARS-CoV-2","AAGATGCTGGAAACAC",2,57.71,10.69,-0.15,0.05,2.97,1.05,0,"1 nonsynonymous","R16G",1
"lib2","SARS-CoV-2","AAGATGGGGGACGTTC",1,0.9,NA,NA,NA,NA,NA,NA,"stop","P7V G83I L122* P149H",4
"lib2","SARS-CoV-2","AAGATGGTACTTCACT",5,92.1,9.82,-1.01,0.07,2.5,1.01,0,">1 nonsynonymous","Y91S A190N",2
"lib2","SARS-CoV-2","AAGATGGTCAATTCAT",4,29.46,10.73,-0.1,0.05,2.94,1.02,0,"1 nonsynonymous","L60C",1
"lib2","SARS-CoV-2","AAGATGGTTGATCATT",3,20.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13K R73L S139A",3
"lib2","SARS-CoV-2","AAGATGTAAACTCTAT",5,24.22,10.8,-0.04,0.03,2.91,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGATGTACAGCAAAA",1,23.59,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","V37W I88M A105V Y119N F156L Q163M",6
"lib2","SARS-CoV-2","AAGATGTACCTAGAAT",1,47.87,9.08,-1.76,0.1,2.72,1.07,0,">1 nonsynonymous","N58I T63K K87S E154M",4
"lib2","SARS-CoV-2","AAGATGTAGATTTAAA",17,196.85,10.1,-0.74,0.02,2.91,1.04,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","AAGATGTCAGATATGT",10,43.06,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T55F P82F F99L S129A E141L",5
"lib2","SARS-CoV-2","AAGATGTGGGAGCCAA",1,11.21,6,-4.84,2,3,1.29,0.05,">1 nonsynonymous","L57I P82A A145Y",3
"lib2","SARS-CoV-2","AAGATGTGGTTGTATC",8,218.4,6.58,-4.26,0.2,1.5,1.15,0,">1 nonsynonymous","K87R Y175K",2
"lib2","SARS-CoV-2","AAGATGTTATGTTTTA",13,327.34,10.69,-0.15,0.04,2.91,1.08,0,"1 nonsynonymous","A145G",1
"lib2","SARS-CoV-2","AAGATGTTCGCTCTGT",1,5.92,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Q84L F99A F156Q",3
"lib2","SARS-CoV-2","AAGATGTTCTAAAATA",8,59.03,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","AAGATGTTGCTATCAG",1,19.2,9.8,-1.04,0.1,1.89,1.04,0.01,">1 nonsynonymous","W106S S164Y L188H",3
"lib2","SARS-CoV-2","AAGATGTTGTCTTAGT",2,78.22,10.13,-0.71,0.06,2.69,1,0,">1 nonsynonymous","G51S S129C T148L",3
"lib2","SARS-CoV-2","AAGATGTTTTGTAGCA",11,146.08,8.67,-2.16,0.06,2.76,1.11,0,">1 nonsynonymous","G146V T201K",2
"lib2","SARS-CoV-2","AAGATTAAAACAACTT",6,373.78,10.55,-0.29,0.03,2.93,1.06,0,"1 nonsynonymous","I104A",1
"lib2","SARS-CoV-2","AAGATTAAACTTTAAT",1,16.95,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V71S G146C",2
"lib2","SARS-CoV-2","AAGATTAACTTCATCC",2,4.36,NA,NA,NA,NA,NA,NA,"stop","C49* V77* I104W",3
"lib2","SARS-CoV-2","AAGATTAAGATTTGTT",1,87.43,10.79,-0.04,0.03,2.87,1.13,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","AAGATTAAGCATGCGG",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97K N120S T201P",3
"lib2","SARS-CoV-2","AAGATTAATAAGCTGA",3,67.63,9.55,-1.29,0.08,2.72,1.06,0,"1 nonsynonymous","G74C",1
"lib2","SARS-CoV-2","AAGATTAATTCACTTA",3,14.34,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","E10N F17I D90T K114S N130W Q144Y",6
"lib2","SARS-CoV-2","AAGATTACACAATATA",3,0,NA,NA,NA,NA,NA,NA,"stop","L60A F156E T201*",3
"lib2","SARS-CoV-2","AAGATTACACAGTAGC",1,5.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L S139Y",2
"lib2","SARS-CoV-2","AAGATTACCAATAATG",1,22.82,10.69,-0.14,0.04,2.95,1.03,0,">1 nonsynonymous","I28L P149V",2
"lib2","SARS-CoV-2","AAGATTACCTTTACAT",9,172.77,10.2,-0.63,0.05,2.86,1.04,0,">1 nonsynonymous","S29V A42S D98R",3
"lib2","SARS-CoV-2","AAGATTAGTTATAATA",4,127.84,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V20L S45H Q84Y L122K P177K",5
"lib2","SARS-CoV-2","AAGATTATAATCGTGT",4,24.98,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G9M K94V N107S S139Y",4
"lib2","SARS-CoV-2","AAGATTATATAACATA",4,39.75,10.62,-0.22,0.06,2.97,1.03,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AAGATTATCACATACC",4,18.71,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V103L V153Y Q168M Y178C",4
"lib2","SARS-CoV-2","AAGATTATGAATAGAT",3,21.21,10.82,-0.02,0.09,3,1.03,0.01,">1 nonsynonymous","Y35L N40A P149E",3
"lib2","SARS-CoV-2","AAGATTATTAACTTTA",2,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T L122N",2
"lib2","SARS-CoV-2","AAGATTATTCCGAGCG",15,186.18,6,-4.84,2,3,1.23,0,">1 nonsynonymous","C6R D98S N120P P149A Q176R",5
"lib2","SARS-CoV-2","AAGATTCACGGCCACG",13,3.69,NA,NA,NA,NA,NA,NA,"stop","N30R Y39* D68K L95G P161V Y178W",6
"lib2","SARS-CoV-2","AAGATTCACTGGCGAG",4,31.43,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","T3P F47T C61N A89V D90L G101M G146I",7
"lib2","SARS-CoV-2","AAGATTCATAGTTAGT",2,38.02,9.53,-1.31,0.1,1.99,1.02,0,">1 nonsynonymous","R16N P133H E141R P149R",4
"lib2","SARS-CoV-2","AAGATTCCAAAAAATT",9,34.16,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A33R C102V N109G T148L",4
"lib2","SARS-CoV-2","AAGATTCCATCTAAAT",4,71.87,10.87,0.03,0.06,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGATTCCCCGTCCGT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V S43M A105S S147Y T201V",5
"lib2","SARS-CoV-2","AAGATTCCTGAACTTT",4,17.95,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","R16A N151F F167R G174Q",4
"lib2","SARS-CoV-2","AAGATTCGAGAAATAA",5,40.17,10.88,0.04,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATTCGAGCCTAAA",3,110.57,6.11,-4.72,1.16,1.5,1.27,0.04,">1 nonsynonymous","D97E R127M C158P",3
"lib2","SARS-CoV-2","AAGATTCGGATTTTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* V37C Q84R N157Y",4
"lib2","SARS-CoV-2","AAGATTCTGAAAGATA",1,6.02,8.55,-2.29,0.27,2.58,1,0.02,">1 nonsynonymous","C61S G166L",2
"lib2","SARS-CoV-2","AAGATTGAAAATAGAC",2,5.69,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","R27M G83Q A89N E135W Y143S C150A",6
"lib2","SARS-CoV-2","AAGATTGAACAGGATA",18,376.23,10.43,-0.41,0.03,2.9,1.04,0,">1 nonsynonymous","N13S S41H",2
"lib2","SARS-CoV-2","AAGATTGAACCTTGTA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89N R124P V180R",3
"lib2","SARS-CoV-2","AAGATTGACCAGAACG",8,169.81,10.44,-0.4,0.03,2.9,1.05,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","AAGATTGCAGATTTCT",5,87.74,10.68,-0.16,0.04,2.98,1.03,0,"1 nonsynonymous","F160I",1
"lib2","SARS-CoV-2","AAGATTGCGACTTCCT",1,13.81,6.96,-3.87,0.42,1.5,1.01,0.03,"1 nonsynonymous","N92Y",1
"lib2","SARS-CoV-2","AAGATTGCTTTCCTCA",9,1.47,NA,NA,NA,NA,NA,NA,"stop","D97I F156* Y165*",3
"lib2","SARS-CoV-2","AAGATTGGAAAAATTT",4,47.95,6,-4.84,2,1.5,1.35,0.03,">1 nonsynonymous","V103E Y175E",2
"lib2","SARS-CoV-2","AAGATTGGAAGCAAAA",7,0.48,NA,NA,NA,NA,NA,NA,"stop","A33V N58D P82*",3
"lib2","SARS-CoV-2","AAGATTGGACGGTCAG",22,205.38,10.82,-0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGATTGTGCAAGCGA",4,20.14,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","T15W V37M G51S G83V G172E R179G",6
"lib2","SARS-CoV-2","AAGATTGTGCATTTCC",10,20.22,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","K48G Y121N",2
"lib2","SARS-CoV-2","AAGATTGTGTATAGGA",7,6.13,NA,NA,NA,NA,NA,NA,"stop","K87A S113* C158A",3
"lib2","SARS-CoV-2","AAGATTGTTATTTTTA",7,117.25,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y123C E141M L162G V173S",4
"lib2","SARS-CoV-2","AAGATTTAAAAAATTA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","N13P C61F R136* C158Y",4
"lib2","SARS-CoV-2","AAGATTTACCAATGCA",3,8.21,9.48,-1.36,0.15,2.17,1,0.01,">1 nonsynonymous","A14Y P54L F62M",3
"lib2","SARS-CoV-2","AAGATTTACGTCGGAT",24,396.61,10.83,0,0.04,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGATTTATATACTAT",1,16.13,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","R16Y A89K P161A",3
"lib2","SARS-CoV-2","AAGATTTCAAGCTCAA",6,123.77,6,-4.84,1.67,1.5,1.15,0.01,">1 nonsynonymous","N24K V37T G51S N157V",4
"lib2","SARS-CoV-2","AAGATTTCGCACAGTA",3,37.9,10.75,-0.09,0.05,2.99,1.01,0,"1 nonsynonymous","N30E",1
"lib2","SARS-CoV-2","AAGATTTCTGACTATT",2,9.6,8.76,-2.08,0.33,1.5,1.14,0.04,">1 nonsynonymous","S41L L57F T100K N107G G174N",5
"lib2","SARS-CoV-2","AAGATTTGACACGATC",4,40.03,10.01,-0.83,0.11,2.35,1.02,0,">1 nonsynonymous","F8V F47M",2
"lib2","SARS-CoV-2","AAGATTTGACATACGG",6,49.17,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41P G86C D112K",3
"lib2","SARS-CoV-2","AAGATTTGATACGAAT",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54D P82L F156A",3
"lib2","SARS-CoV-2","AAGATTTGGGGACAGC",10,2.34,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","AAGATTTTAAATTTTC",2,7,7.74,-3.09,0.49,1.5,1.16,0.05,">1 nonsynonymous","W106N F156L",2
"lib2","SARS-CoV-2","AAGATTTTACAATCAC",12,88.4,10.86,0.02,0.06,2.87,1.14,0,">1 nonsynonymous","T3H T55N N64E",3
"lib2","SARS-CoV-2","AAGATTTTTGTATTCA",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D F70M Y143E",3
"lib2","SARS-CoV-2","AAGATTTTTTAGTTTT",11,62.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N64I L95T Y123C",3
"lib2","SARS-CoV-2","AAGCAAAAAAAGCGCA",3,75.58,10.79,-0.04,0.06,2.84,1.17,0,"1 nonsynonymous","K56D",1
"lib2","SARS-CoV-2","AAGCAAAAAAGATCCT",6,66.78,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K26S Y119G T148D P161G",4
"lib2","SARS-CoV-2","AAGCAAAAAGAGACAT",5,138.74,9.61,-1.23,0.04,2.79,1.07,0,">1 nonsynonymous","V37E P177C P197L",3
"lib2","SARS-CoV-2","AAGCAAAACCGCTGAT",4,71.87,10.11,-0.73,0.08,2.75,1.02,0,">1 nonsynonymous","V71A F160Y",2
"lib2","SARS-CoV-2","AAGCAAAACCGGGAAA",5,54.74,6,-4.84,1.99,1.5,1.15,0.02,">1 nonsynonymous","S36P N109D I142R Y178F",4
"lib2","SARS-CoV-2","AAGCAAAAGAGAATGT",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T S53D",2
"lib2","SARS-CoV-2","AAGCAAAAGGGATACG",3,27.77,10.06,-0.78,0.11,2.68,1.09,0.01,">1 nonsynonymous","S36L G83F K128F",3
"lib2","SARS-CoV-2","AAGCAAAATAGCTTGG",8,66.23,10.3,-0.54,0.05,2.77,1.07,0,">1 nonsynonymous","T85F F134N",2
"lib2","SARS-CoV-2","AAGCAAAATATCAGGG",4,40.39,9.53,-1.3,0.05,2.92,1.04,0,">1 nonsynonymous","F62W Q176S",2
"lib2","SARS-CoV-2","AAGCAAAATGCCCTTA",7,97.17,8.99,-1.85,0.11,1.54,1.05,0.01,"1 nonsynonymous","D137F",1
"lib2","SARS-CoV-2","AAGCAAAATGGCTAAA",8,108.96,6,-4.84,2,3,1.32,0.01,"1 nonsynonymous","L95K",1
"lib2","SARS-CoV-2","AAGCAAACATGAAGGC",4,55.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16T G86V Y175C F185V",4
"lib2","SARS-CoV-2","AAGCAAACCCAGGTGT",9,116.61,10.72,-0.12,0.05,2.93,1.08,0,">1 nonsynonymous","L60T P197G",2
"lib2","SARS-CoV-2","AAGCAAACCGAATTCT",6,0.79,NA,NA,NA,NA,NA,NA,"stop","Y35T I88* G172S",3
"lib2","SARS-CoV-2","AAGCAAACCTTATGAT",6,45.33,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F44L A105N R124C",3
"lib2","SARS-CoV-2","AAGCAAACGCAGGCAA",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C T140Q",2
"lib2","SARS-CoV-2","AAGCAAACGGCACACT",1,46.02,8.45,-2.39,0.16,2.82,1.1,0.01,"1 nonsynonymous","Y175C",1
"lib2","SARS-CoV-2","AAGCAAACTGGAACCT",4,0.53,NA,NA,NA,NA,NA,NA,"stop","N1G G86K I142D T148*",4
"lib2","SARS-CoV-2","AAGCAAACTGTTTGTA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","V71L Q168*",2
"lib2","SARS-CoV-2","AAGCAAAGAAAAGTTG",6,38.85,10.31,-0.53,0.07,2.83,1.08,0,">1 nonsynonymous","T63F G83F",2
"lib2","SARS-CoV-2","AAGCAAAGAAACGACT",4,9.81,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","S19N R25G S43V T55R K87R F99D",6
"lib2","SARS-CoV-2","AAGCAAAGACGGAGAA",7,113.98,9.03,-1.8,0.06,2.92,1.03,0,">1 nonsynonymous","P7L Y119T",2
"lib2","SARS-CoV-2","AAGCAAAGCCTCAGCC",1,5.75,6,-4.84,1.38,1.5,1.06,0.01,">1 nonsynonymous","L95G K132S Q168P",3
"lib2","SARS-CoV-2","AAGCAAAGGATCTTTT",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R Y93A D98G P177K",4
"lib2","SARS-CoV-2","AAGCAAATAAAGCCAT",3,21.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42V K56D D90P T100L",4
"lib2","SARS-CoV-2","AAGCAAATAACCTGGT",12,173.44,9.29,-1.55,0.05,2.81,1.09,0,">1 nonsynonymous","Y35V N110T Y119Q",3
"lib2","SARS-CoV-2","AAGCAAATAGTTGCAG",8,16.36,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","N4I A14P I72P Q168I V181M",5
"lib2","SARS-CoV-2","AAGCAAATCTCGTTGT",3,73.9,10.17,-0.67,0.05,2.6,1.08,0,">1 nonsynonymous","N64T D90I",2
"lib2","SARS-CoV-2","AAGCAAATTACAGCTA",7,44.56,8.23,-2.61,0.15,2.13,1.04,0.01,">1 nonsynonymous","V37K K48T A81S G117V",4
"lib2","SARS-CoV-2","AAGCAAATTTCAATGC",3,0.07,NA,NA,NA,NA,NA,NA,"stop","Y50* Y91* R127G",3
"lib2","SARS-CoV-2","AAGCAACAAACCAGTG",4,20.43,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L38I A89F D112E R124G T201V",5
"lib2","SARS-CoV-2","AAGCAACAGATTGTTG",8,42.11,10.74,-0.1,0.08,2.91,1.1,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","AAGCAACATCTCCCGC",4,74.49,10.81,-0.03,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCAACATTTATCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","L60* V77L P96L T170*",4
"lib2","SARS-CoV-2","AAGCAACATTTCTGGA",2,18.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36R N109K C150F",3
"lib2","SARS-CoV-2","AAGCAACCAAAATACC",6,24.15,6,-4.84,2,2.24,1.14,0.01,">1 nonsynonymous","T46C D68E P96T D98I",4
"lib2","SARS-CoV-2","AAGCAACCACTTGTTT",5,42.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A42K D112S R136I S164V T201V",5
"lib2","SARS-CoV-2","AAGCAACCCGATTAGG",8,104.09,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44W L60V R127K V181A K198E",5
"lib2","SARS-CoV-2","AAGCAACCTCCCCCTT",1,17.19,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","N64A V71L D97V W106D Y165H G172V",6
"lib2","SARS-CoV-2","AAGCAACGAAACAAAA",6,14.9,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","I2G S41C P82F G86M D112S S129H S139H",7
"lib2","SARS-CoV-2","AAGCAACGACAAAACT",2,47.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P7S E76R N92Q L125W Q144A",5
"lib2","SARS-CoV-2","AAGCAACGTAGTCTCG",1,1.31,NA,NA,NA,NA,NA,NA,"stop","Q84* C150F F160T",3
"lib2","SARS-CoV-2","AAGCAACTAACGAGGG",2,12.32,10.56,-0.28,0.13,2.74,1.26,0.01,">1 nonsynonymous","K56V S129T T148Y",3
"lib2","SARS-CoV-2","AAGCAACTGGTCATAC",2,28.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L D98V N107S Q144S L162V",5
"lib2","SARS-CoV-2","AAGCAACTTTAGCGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","V103* S139N C150I",3
"lib2","SARS-CoV-2","AAGCAACTTTATACAG",24,4.59,NA,NA,NA,NA,NA,NA,"stop","N4P S129N Y143T T148* G152C P161Q G166E",7
"lib2","SARS-CoV-2","AAGCAAGACAACAATA",1,6.06,9.84,-1,0.38,2.56,1.25,0.02,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","AAGCAAGACAGGAGAA",5,5.51,8.02,-2.81,0.17,2.81,1.05,0.01,">1 nonsynonymous","C49G T63N Y175L",3
"lib2","SARS-CoV-2","AAGCAAGACCGGTACC",1,0.97,NA,NA,NA,NA,NA,NA,"stop","A42R N107F E135* P149K",4
"lib2","SARS-CoV-2","AAGCAAGAGCGCCTGG",5,49.88,8.42,-2.41,0.11,2.97,1.02,0.01,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","AAGCAAGAGTACAGTC",6,9.07,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V20H I28F Y39T",3
"lib2","SARS-CoV-2","AAGCAAGCAAAGTAAT",8,282.2,10.18,-0.66,0.04,2.69,1.06,0,">1 nonsynonymous","E10V L60A K128S",3
"lib2","SARS-CoV-2","AAGCAAGCTTCCAAAA",5,52.46,9.45,-1.39,0.1,1.87,1.04,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","AAGCAAGCTTTCGAAT",1,16.65,10.69,-0.14,0.09,2.76,1.24,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCAAGGCTATGCAT",7,0.7,NA,NA,NA,NA,NA,NA,"stop","E135* Y165*",2
"lib2","SARS-CoV-2","AAGCAAGTCCACAACT",3,38.84,8.61,-2.23,0.14,1.89,1.09,0.01,">1 nonsynonymous","N40T N107L",2
"lib2","SARS-CoV-2","AAGCAAGTTCAACAAC",7,0.45,NA,NA,NA,NA,NA,NA,"stop","Y35E F62Y T85R Y119* Y159E G166A",6
"lib2","SARS-CoV-2","AAGCAATAAAAAAAAA",5,31.95,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y93R E141F",2
"lib2","SARS-CoV-2","AAGCAATAAAAACCAA",1,19.46,9.25,-1.58,0.21,1.82,1.07,0.02,">1 nonsynonymous","T55A S69V",2
"lib2","SARS-CoV-2","AAGCAATAGATCAGTG",3,16.28,7.19,-3.64,0.62,1.56,1.22,0.07,">1 nonsynonymous","S45W A81S D137S Y143K V173T",5
"lib2","SARS-CoV-2","AAGCAATATACATTAT",4,47.45,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","R25D L38Y L60R S129I L162V",5
"lib2","SARS-CoV-2","AAGCAATATACCCGCA",1,17.54,6,-4.84,2,3,1.17,0,">1 nonsynonymous","R16Q Y165V V180M",3
"lib2","SARS-CoV-2","AAGCAATATAGTCTAC",10,134.87,10.29,-0.55,0.04,2.87,1.02,0,"1 nonsynonymous","Q79S",1
"lib2","SARS-CoV-2","AAGCAATATGATCTCA",4,107.12,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44S G86N Y93M A105K L131D",5
"lib2","SARS-CoV-2","AAGCAATCAATTGAAA",5,150.24,10.83,-0.01,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCAATCACCAATGC",4,0,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","AAGCAATCATAGGACG",7,2.33,NA,NA,NA,NA,NA,NA,"stop","D59N P96* R124S",3
"lib2","SARS-CoV-2","AAGCAATGAGTGTAGA",10,121.32,9.85,-0.99,0.1,2.33,1.05,0,"1 nonsynonymous","S19K",1
"lib2","SARS-CoV-2","AAGCAATTAAATCCAA",5,258.09,9.74,-1.09,0.05,2.69,1.06,0,">1 nonsynonymous","T3C R16S V32S N109G",4
"lib2","SARS-CoV-2","AAGCAATTAGGATAAT",3,115.17,10.53,-0.31,0.04,2.96,1.03,0,"1 nonsynonymous","V71T",1
"lib2","SARS-CoV-2","AAGCACAAAGTCAATA",6,66.96,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8T I104R Q176H",3
"lib2","SARS-CoV-2","AAGCACAAATAAGAAA",7,0.93,NA,NA,NA,NA,NA,NA,"stop","C6M T55M G83P F99L I104V E135V S164*",7
"lib2","SARS-CoV-2","AAGCACAAATCAATAA",6,56.64,9.15,-1.69,0.11,1.87,1.06,0.01,">1 nonsynonymous","F12S A190R",2
"lib2","SARS-CoV-2","AAGCACAAATGACGCC",5,2.02,NA,NA,NA,NA,NA,NA,"stop","G86F F99V R124L P197*",4
"lib2","SARS-CoV-2","AAGCACAACGGATTTA",2,0.54,NA,NA,NA,NA,NA,NA,"stop","T63* Y119Q",2
"lib2","SARS-CoV-2","AAGCACAAGTCTAGTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V P149N G174H V180C",4
"lib2","SARS-CoV-2","AAGCACAAGTTGTTTC",6,3.63,NA,NA,NA,NA,NA,NA,"stop","L57F C150*",2
"lib2","SARS-CoV-2","AAGCACAATACTTCGC",6,80.26,9.15,-1.69,0.03,2.95,1.05,0,">1 nonsynonymous","T100L G116D L125C K132F",4
"lib2","SARS-CoV-2","AAGCACACACATATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14D C49L Y93V L125*",4
"lib2","SARS-CoV-2","AAGCACACAGAGCCAA",19,139.4,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S45H L60P W106T L162E",4
"lib2","SARS-CoV-2","AAGCACACATTTTTAA",1,13.52,9.95,-0.88,0.12,2.5,1,0.01,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","AAGCACACGTACCAAA",5,0.1,NA,NA,NA,NA,NA,NA,"stop","E141R G155*",2
"lib2","SARS-CoV-2","AAGCACACGTTACTTT",2,36.75,9.85,-0.98,0.09,2.26,1.11,0,">1 nonsynonymous","N40T Y66H S129I",3
"lib2","SARS-CoV-2","AAGCACAGGTCTAAGC",1,17.21,10.75,-0.08,0.06,2.97,1.06,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","AAGCACATCAGTGTCG",3,38.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31L K87C W106G G117D",4
"lib2","SARS-CoV-2","AAGCACATGAACCAAC",2,19.82,7.59,-3.24,0.23,1.5,1.09,0.02,">1 nonsynonymous","A81C V181C",2
"lib2","SARS-CoV-2","AAGCACATTTATGTAA",2,4.4,NA,NA,NA,NA,NA,NA,"stop","N1* E154L",2
"lib2","SARS-CoV-2","AAGCACCAAACCCCCG",4,19.19,10.38,-0.46,0.08,2.61,1.23,0,">1 nonsynonymous","N107C K198V",2
"lib2","SARS-CoV-2","AAGCACCAACAGTATC",6,33.04,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D90E V115K E154C L183S H189A",5
"lib2","SARS-CoV-2","AAGCACCAAGATCCGG",9,128.64,8.85,-1.99,0.05,3,1.04,0,">1 nonsynonymous","Q84G T170V",2
"lib2","SARS-CoV-2","AAGCACCAGAAACTCG",3,23.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G I80R G152F",3
"lib2","SARS-CoV-2","AAGCACCCTGCGTTAT",5,89.91,6,-4.84,0.58,1.73,1.14,0,">1 nonsynonymous","N58H K94S F134A Q168R",4
"lib2","SARS-CoV-2","AAGCACCGACCGTTTT",10,110.03,6,-4.84,1.07,1.5,1.2,0.01,">1 nonsynonymous","D98K L131G",2
"lib2","SARS-CoV-2","AAGCACCGAGGTGGAT",9,6.22,NA,NA,NA,NA,NA,NA,"stop","N13D S36Q F44Y Y50F N110* P149R",6
"lib2","SARS-CoV-2","AAGCACCTATTTGAGT",3,37.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N13D F62N Y175S",3
"lib2","SARS-CoV-2","AAGCACCTCCGAATAG",1,5.66,9.08,-1.76,0.45,1.59,1.1,0.05,">1 nonsynonymous","L5R N40A G83L N107D",4
"lib2","SARS-CoV-2","AAGCACGAGCGGTCTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","E10L C61* A81W L95Y L162Y",5
"lib2","SARS-CoV-2","AAGCACGCCCTGAGCC",3,25.51,9.58,-1.25,0.19,1.84,1.12,0.02,"1 nonsynonymous","Q84P",1
"lib2","SARS-CoV-2","AAGCACGCGAAATCTT",3,38.45,8.46,-2.38,0.35,1.5,1,0.05,">1 nonsynonymous","S36D I104K",2
"lib2","SARS-CoV-2","AAGCACGGACTAGGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A18* L57I R127S S147A P161L",5
"lib2","SARS-CoV-2","AAGCACTAAGCTATAC",17,204.07,10.06,-0.77,0.09,2.32,1.04,0,">1 nonsynonymous","T15I L60W",2
"lib2","SARS-CoV-2","AAGCACTAATGGATAA",2,11.52,10.79,-0.04,0.08,2.98,1.05,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","AAGCACTAGAACAAAA",1,5.8,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","V103M T148N V181I",3
"lib2","SARS-CoV-2","AAGCACTCGGCGCCTT",16,205.22,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C6R Y93R G155A Q176F",4
"lib2","SARS-CoV-2","AAGCACTTACTGTGGA",8,126.02,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N40V T63I R78P S113P Y119P P133Q Y159S",7
"lib2","SARS-CoV-2","AAGCAGAAACGAGCAA",11,121.17,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","C6N V52I E141Y G172F",4
"lib2","SARS-CoV-2","AAGCAGAAACTAATTA",4,100.09,10.46,-0.38,0.05,2.95,1.06,0,">1 nonsynonymous","R16N V37L K87N",3
"lib2","SARS-CoV-2","AAGCAGAAGTCCAGTC",11,274.55,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y143M N151E C158A Y175V",4
"lib2","SARS-CoV-2","AAGCAGAATCTTTAAT",2,9.52,6.59,-4.25,1.54,1.5,1.07,0.05,">1 nonsynonymous","D68N D98N G101D L122I V181Q",5
"lib2","SARS-CoV-2","AAGCAGAATGCAAACG",5,126.38,7.95,-2.89,0.1,2.7,1.04,0,">1 nonsynonymous","D98A F126E",2
"lib2","SARS-CoV-2","AAGCAGAATGCAGAAA",5,41.15,10.92,0.08,0.04,2.96,1.05,0,"1 nonsynonymous","T3Q",1
"lib2","SARS-CoV-2","AAGCAGACCATACTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15D F160* F185Y",3
"lib2","SARS-CoV-2","AAGCAGACGATAGGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","G51S N120C Y175*",3
"lib2","SARS-CoV-2","AAGCAGACGCTATAGT",2,62.72,6,-4.84,1.41,1.5,1.15,0.01,">1 nonsynonymous","F47N L57M R73Q S129V",4
"lib2","SARS-CoV-2","AAGCAGAGAAACAGAA",2,25.81,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N1R P82R D90R N120R T140N E154M G172K",7
"lib2","SARS-CoV-2","AAGCAGAGAAGCATTG",6,74.68,10.77,-0.07,0.03,2.97,1.03,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","AAGCAGAGAGGCCGGG",9,133.34,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","AAGCAGATTTGTCAAA",20,4.32,NA,NA,NA,NA,NA,NA,"stop","S41L T55V D90M P96E E135L C158*",6
"lib2","SARS-CoV-2","AAGCAGCAACCGGACG",3,24.88,10.11,-0.73,0.06,2.97,1,0,">1 nonsynonymous","V37L L125V",2
"lib2","SARS-CoV-2","AAGCAGCCCACTTTAT",1,13.53,10.82,-0.01,0.07,2.96,1.11,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","AAGCAGCGTATAAGTG",5,238.13,8.37,-2.47,0.07,2.54,1.07,0,"1 nonsynonymous","R73H",1
"lib2","SARS-CoV-2","AAGCAGCTTAAACTAT",5,1.03,NA,NA,NA,NA,NA,NA,"stop","I2S L111Y S139D T170* Q176*",5
"lib2","SARS-CoV-2","AAGCAGGAATTCGGTG",2,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W F12Y N30G S113K F134S Q163Y S184G",7
"lib2","SARS-CoV-2","AAGCAGGACATGCACA",3,32.97,9.2,-1.64,0.08,2.03,1.08,0,">1 nonsynonymous","K87M L95M C102M",3
"lib2","SARS-CoV-2","AAGCAGGATGCTTTTT",8,0.88,NA,NA,NA,NA,NA,NA,"stop","V32A C61A N107A E186*",4
"lib2","SARS-CoV-2","AAGCAGGATTGTCCCA",15,225.87,10.33,-0.51,0.02,2.93,1.04,0,">1 nonsynonymous","P7T T148V N151F",3
"lib2","SARS-CoV-2","AAGCAGGTAACAATTA",11,86.71,9.71,-1.13,0.07,2.63,1.07,0,">1 nonsynonymous","Y91M V173G",2
"lib2","SARS-CoV-2","AAGCAGTAAAAATAGT",1,16.25,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","C6N F12I S41P S108F",4
"lib2","SARS-CoV-2","AAGCAGTAAAACAATA",5,63.01,10.53,-0.3,0.02,2.98,1,0,">1 nonsynonymous","K94H P149T",2
"lib2","SARS-CoV-2","AAGCAGTAAACGAAAC",2,107.19,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y21K V103Y Y119I L131S I138N P177T K198S",7
"lib2","SARS-CoV-2","AAGCAGTATGAGTGCT",14,181.7,9.21,-1.62,0.06,2.49,1.08,0,">1 nonsynonymous","T100W N107E",2
"lib2","SARS-CoV-2","AAGCAGTCACAATCCT",10,92.81,6,-4.84,1.19,1.5,1.17,0.01,">1 nonsynonymous","W23L P82K N120Q E141T Q176T",5
"lib2","SARS-CoV-2","AAGCAGTCACGCTGCT",2,8.01,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","V11F V37M V103F F185S",4
"lib2","SARS-CoV-2","AAGCAGTCACGTTCAC",6,3.87,NA,NA,NA,NA,NA,NA,"stop","C61M C102* R127V",3
"lib2","SARS-CoV-2","AAGCAGTTAACCGTTT",6,102.12,10.15,-0.68,0.04,2.91,1.05,0,">1 nonsynonymous","V32L D59E E154V",3
"lib2","SARS-CoV-2","AAGCATAAAAAAAAAC",1,11.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33L P149C L183A",3
"lib2","SARS-CoV-2","AAGCATAAAAAGGAGT",5,37.55,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14N D98R W106V G172E",4
"lib2","SARS-CoV-2","AAGCATAAATAGGGAT",10,74.87,10.78,-0.06,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATAAATCGATGG",1,34.26,7.75,-3.09,0.28,1.5,1.08,0.02,"1 nonsynonymous","A89W",1
"lib2","SARS-CoV-2","AAGCATAACACCATAA",8,111.82,9.87,-0.97,0.09,2.16,1.11,0,">1 nonsynonymous","G51Y K198D",2
"lib2","SARS-CoV-2","AAGCATAAGCACACTT",2,33.1,10.7,-0.14,0.06,2.89,1.12,0,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","AAGCATAATAATGTAA",1,12.55,8.97,-1.87,0.18,1.83,1.07,0.02,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","AAGCATAATCAACGTA",17,228.37,10.54,-0.29,0.03,2.91,1.08,0,">1 nonsynonymous","N40L G146S",2
"lib2","SARS-CoV-2","AAGCATAATTATGTAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","A33F S43R F99S W106* G152V",5
"lib2","SARS-CoV-2","AAGCATACCTTAGGAC",1,72.67,10.8,-0.04,0.08,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATATAAATTAGA",17,35.43,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6S C49W C61F Y93A",4
"lib2","SARS-CoV-2","AAGCATATAATAAGAG",10,23.35,9.4,-1.44,0.25,1.5,1,0.02,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","AAGCATATCCTAGTAA",4,31.43,10.86,0.02,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATATTATAGTAG",2,19.87,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C6A F47D G117V",3
"lib2","SARS-CoV-2","AAGCATATTGCGTATA",1,23.53,8.53,-2.3,0.1,2.87,1.13,0,">1 nonsynonymous","P54M T100S G174V",3
"lib2","SARS-CoV-2","AAGCATCAAGATATCA",4,79.52,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V77Y D98C F167A",3
"lib2","SARS-CoV-2","AAGCATCAGAATCTAA",8,16.01,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","T3A S19C I80S C102N P133K",5
"lib2","SARS-CoV-2","AAGCATCATCAATAAT",7,151.81,10.82,-0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATCATTTATTGA",7,70.06,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5R D34G V52C A89F V115M Y121T G146N",7
"lib2","SARS-CoV-2","AAGCATCCAATTTATC",1,21.4,8.44,-2.4,0.18,1.59,1.05,0.02,">1 nonsynonymous","N13Y N120K L125P F160I",4
"lib2","SARS-CoV-2","AAGCATCCATATCGAT",3,23.06,6.26,-4.58,1.01,1.5,1.1,0.06,">1 nonsynonymous","L57S E141V P161F",3
"lib2","SARS-CoV-2","AAGCATCCATGGTACG",1,16.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V11P N92S C150L T201I",4
"lib2","SARS-CoV-2","AAGCATCGATATATAT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T3M Y50N N130G F160*",4
"lib2","SARS-CoV-2","AAGCATCTAACCCAGC",7,2.27,NA,NA,NA,NA,NA,NA,"stop","L5* Y39* D97K F156T",4
"lib2","SARS-CoV-2","AAGCATCTAGCCAATC",5,160.1,10.79,-0.05,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATCTTAACTCTA",6,219.97,10.13,-0.7,0.04,2.75,1.09,0,">1 nonsynonymous","S41A T55D V180T",3
"lib2","SARS-CoV-2","AAGCATCTTATCCATC",17,131.01,6,-4.84,2,1.84,1.16,0,">1 nonsynonymous","V32A P96W F156C",3
"lib2","SARS-CoV-2","AAGCATCTTCAAAAAA",10,4.51,NA,NA,NA,NA,NA,NA,"stop","A14N S36K K48*",3
"lib2","SARS-CoV-2","AAGCATGACGATCCCA",3,50.31,10.75,-0.09,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCATGAGAGACTTA",5,39.68,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P82W K87L",2
"lib2","SARS-CoV-2","AAGCATGCAATGTCAG",9,32.67,6,-4.84,1.91,1.5,1.23,0.05,">1 nonsynonymous","G9D P82N D90N V173W",4
"lib2","SARS-CoV-2","AAGCATGCACACCCGA",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T Y91K T148V",3
"lib2","SARS-CoV-2","AAGCATGCACGGGACA",10,145.15,9.09,-1.75,0.07,2.23,1.06,0,">1 nonsynonymous","L60E D98I G174H A190D",4
"lib2","SARS-CoV-2","AAGCATGGACAACTCG",3,62.73,8.72,-2.11,0.15,2.05,1.14,0.01,">1 nonsynonymous","L38S Y159H",2
"lib2","SARS-CoV-2","AAGCATGGCACCCCCA",9,85.36,6.05,-4.78,0.78,1.5,1.17,0.01,">1 nonsynonymous","V11F D90Y Y119C T201R",4
"lib2","SARS-CoV-2","AAGCATGTTCAATTGA",2,0.98,NA,NA,NA,NA,NA,NA,"stop","K87Y D97I Y119*",3
"lib2","SARS-CoV-2","AAGCATTAAAATTTCC",2,22.67,10.65,-0.19,0.06,2.97,1.06,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","AAGCATTAAACTTTGT",5,198.61,10.05,-0.78,0.04,2.77,1.04,0,">1 nonsynonymous","K128V Y178V",2
"lib2","SARS-CoV-2","AAGCATTAGAACTGTT",1,7.74,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","V52F V115S D137V L183T",4
"lib2","SARS-CoV-2","AAGCATTATCTTAATA",2,18.68,10.88,0.05,0.07,2.96,1.04,0,">1 nonsynonymous","V37E K56M",2
"lib2","SARS-CoV-2","AAGCATTCGCAATAAA",2,39.24,8.19,-2.65,0.12,1.79,1.09,0.01,">1 nonsynonymous","N58A T100L G117N F160L E186S",5
"lib2","SARS-CoV-2","AAGCATTGGCTAAAAC",9,150.49,10.56,-0.27,0.03,2.94,1.05,0,">1 nonsynonymous","A33P D97H",2
"lib2","SARS-CoV-2","AAGCATTGTCGTCCAC",2,10.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34R K48M G83Y K87F D98I",5
"lib2","SARS-CoV-2","AAGCATTGTCGTTATG",4,195.24,9.21,-1.62,0.04,2.88,1.13,0,">1 nonsynonymous","G83K Y119E",2
"lib2","SARS-CoV-2","AAGCATTTGAGCAGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S45K V103L L122* S139G Q176E",5
"lib2","SARS-CoV-2","AAGCCAAACCCTGTTA",9,1.8,NA,NA,NA,NA,NA,NA,"stop","T100K V103S L122K G152* K198M",5
"lib2","SARS-CoV-2","AAGCCAAATCAAGGAA",9,133.81,10.7,-0.14,0.06,2.89,1.09,0,">1 nonsynonymous","G9R A42R",2
"lib2","SARS-CoV-2","AAGCCAACACATTCAT",1,6.98,7.65,-3.19,0.37,1.76,1.14,0.04,">1 nonsynonymous","W23D D97E P149A",3
"lib2","SARS-CoV-2","AAGCCAACCACTTCAG",2,11.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106N Y143M T201V",3
"lib2","SARS-CoV-2","AAGCCAACCCATGCTG",4,17.96,6.41,-4.43,0.22,3,1.06,0,">1 nonsynonymous","C6D D112P L122V",3
"lib2","SARS-CoV-2","AAGCCAACGCGATCCC",2,104.34,10.21,-0.62,0.04,2.75,1.05,0,">1 nonsynonymous","A14I E141G",2
"lib2","SARS-CoV-2","AAGCCAACTAATGAAA",2,26.14,10.89,0.05,0.06,3,1,0,">1 nonsynonymous","Y35L E141V",2
"lib2","SARS-CoV-2","AAGCCAACTGTTTTAG",3,37.27,6,-4.84,0.72,1.5,1.1,0.01,">1 nonsynonymous","F99I R127E V173S Y178F",4
"lib2","SARS-CoV-2","AAGCCAAGTGTAAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","R73* G117E L183M T201S",4
"lib2","SARS-CoV-2","AAGCCAATATTCCAAG",4,0.31,NA,NA,NA,NA,NA,NA,"stop","T3R I28* P96C K128V S147A F156P",6
"lib2","SARS-CoV-2","AAGCCAATGATTAGAC",24,396.7,10.02,-0.81,0.05,2.5,1.06,0,">1 nonsynonymous","D34G D97S",2
"lib2","SARS-CoV-2","AAGCCAATTTCCCTAG",8,45.69,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12Y T148C N157P",3
"lib2","SARS-CoV-2","AAGCCACAAATGATGT",2,47.74,10.57,-0.26,0.06,2.87,1.09,0,">1 nonsynonymous","A22E Y66W Q168R",3
"lib2","SARS-CoV-2","AAGCCACAAGTGACCC",2,5.76,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAGCCACATAATGACC",12,93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C61R S69W N118P Y143W",4
"lib2","SARS-CoV-2","AAGCCACATGGTTTCT",4,9.17,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","I2S F12G T46R A89V V103W",5
"lib2","SARS-CoV-2","AAGCCACATTGTCGCG",4,42.38,10.75,-0.09,0.04,2.95,1.06,0,">1 nonsynonymous","N4T D90N N120K",3
"lib2","SARS-CoV-2","AAGCCACCTGCGCAAC",2,47.44,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D90I F134R Y165W",3
"lib2","SARS-CoV-2","AAGCCACGAAAAAATA",17,207.65,10.5,-0.34,0.05,2.9,1.09,0,">1 nonsynonymous","Y123R T201N",2
"lib2","SARS-CoV-2","AAGCCACGAAATAATA",5,1.09,NA,NA,NA,NA,NA,NA,"stop","F8I L38P F99T T140* G174M",5
"lib2","SARS-CoV-2","AAGCCACGACAATACA",5,105.39,8.61,-2.23,0.13,1.76,1.16,0.01,">1 nonsynonymous","R25A T55D F156V",3
"lib2","SARS-CoV-2","AAGCCACGAGGGTGCA",7,31.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45M K87Q V103N L122Q",4
"lib2","SARS-CoV-2","AAGCCACGGGATTACT",1,9.1,10.94,0.1,0.08,2.75,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCCACGTAAAGTAT",1,59.37,10.93,0.1,0.04,2.96,1.05,0,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","AAGCCACTAGACCTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179F",1
"lib2","SARS-CoV-2","AAGCCACTGGGAGGAT",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R F99N",2
"lib2","SARS-CoV-2","AAGCCAGAATTTCGAA",6,26.52,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14T C49T C158S P169H",4
"lib2","SARS-CoV-2","AAGCCAGACTAACTCG",5,70.04,9.31,-1.53,0.09,1.83,1.03,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","AAGCCAGAGCTATGAA",5,36.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T3N E10N S69L N130E P149R G172S L188C",7
"lib2","SARS-CoV-2","AAGCCAGATGCTACAA",2,12.84,10.83,-0.01,0.15,2.96,1,0,">1 nonsynonymous","S36F A190L T201I",3
"lib2","SARS-CoV-2","AAGCCAGCAAGATAGT",11,0.5,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib2","SARS-CoV-2","AAGCCAGGGAACCCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* F8L K26G D98T Y119R T148*",6
"lib2","SARS-CoV-2","AAGCCAGGTACCTCCA",1,16.34,10.79,-0.04,0.07,3,1.03,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AAGCCATAAATTCGAG",3,62.82,10.75,-0.09,0.05,2.9,1.12,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","AAGCCATAATCGCCTA",5,152.89,10.74,-0.1,0.03,2.95,1.05,0,">1 nonsynonymous","N120G L131V",2
"lib2","SARS-CoV-2","AAGCCATAGTTACTGA",3,11.87,7.54,-3.29,0.28,1.5,1.03,0.01,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","AAGCCATGGCCACACA",4,46.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23D L38T D68W F70L G117C",5
"lib2","SARS-CoV-2","AAGCCATTGTCGGTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T F167R",2
"lib2","SARS-CoV-2","AAGCCCAAATGAAACC",6,57.81,9.68,-1.16,0.1,1.68,1.1,0,">1 nonsynonymous","P54L P96L",2
"lib2","SARS-CoV-2","AAGCCCACACGCACTT",3,61.64,10.67,-0.16,0.03,2.97,1.05,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","AAGCCCACAGATTAAT",1,1.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAGCCCAGAAGAAAAC",6,59.35,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D98G D112K L131W C158L",4
"lib2","SARS-CoV-2","AAGCCCAGACAATTTA",9,253.52,10.04,-0.8,0.05,2.6,1.04,0,">1 nonsynonymous","Y35Q F160G",2
"lib2","SARS-CoV-2","AAGCCCAGATCTAACT",1,21.09,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A18L V37E V77K N92R V103W E141D P149S",7
"lib2","SARS-CoV-2","AAGCCCAGCGAAACAT",2,45.32,10.81,-0.03,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCCCAGCTCTTCAT",2,42.83,10.8,-0.04,0.05,2.97,1.06,0,">1 nonsynonymous","F160R V173H",2
"lib2","SARS-CoV-2","AAGCCCAGGATATGAG",2,75.98,10.49,-0.34,0.05,2.89,1.12,0,">1 nonsynonymous","N58S K114T L122I",3
"lib2","SARS-CoV-2","AAGCCCATAATGCAGC",7,77.92,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S36T V77N T85L N107T",4
"lib2","SARS-CoV-2","AAGCCCATCAAATGAA",4,1.92,NA,NA,NA,NA,NA,NA,"stop","T63S K87L W106* S113I",4
"lib2","SARS-CoV-2","AAGCCCATCATAGCCA",10,27.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K48L G86N Y93A P161W",4
"lib2","SARS-CoV-2","AAGCCCCAAAACCAAT",5,112.32,9.5,-1.33,0.06,2.05,1.08,0,"1 nonsynonymous","F8N",1
"lib2","SARS-CoV-2","AAGCCCCACGCCCATT",3,16.84,9.59,-1.25,0.2,2.16,1.02,0.02,">1 nonsynonymous","S43F N64Y R127H",3
"lib2","SARS-CoV-2","AAGCCCCCATCTCGAA",4,28.91,8.24,-2.59,0.36,1.5,1,0.06,">1 nonsynonymous","Y66E K94F",2
"lib2","SARS-CoV-2","AAGCCCCCGTAACCAG",1,7.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S C150V",2
"lib2","SARS-CoV-2","AAGCCCCGGGCGTAAT",1,21.41,9.48,-1.35,0.15,2.41,1.06,0.01,">1 nonsynonymous","A42G P149F L162F",3
"lib2","SARS-CoV-2","AAGCCCCTAATCGACT",2,27.2,10.59,-0.24,0.07,2.84,1.09,0,">1 nonsynonymous","N1L K48H T100I",3
"lib2","SARS-CoV-2","AAGCCCCTACAGATCC",1,11.76,10.25,-0.59,0.16,2.65,1.07,0.01,">1 nonsynonymous","N4L D97W",2
"lib2","SARS-CoV-2","AAGCCCCTTGAGTCCT",3,46.7,8.32,-2.51,0.17,2.69,1.13,0.01,">1 nonsynonymous","Y35L S113E",2
"lib2","SARS-CoV-2","AAGCCCGCTACCTGGA",4,34.58,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N1C G83W T85A K94L S113N N157E Q163H",7
"lib2","SARS-CoV-2","AAGCCCGCTCGCATGC",9,33.64,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y66S R73S N109Y Y121I",4
"lib2","SARS-CoV-2","AAGCCCGGCACCTGTG",3,0,NA,NA,NA,NA,NA,NA,"stop","F12* C150F",2
"lib2","SARS-CoV-2","AAGCCCGTACATTTTA",7,276.11,10.19,-0.65,0.04,2.9,1.05,0,"1 nonsynonymous","C31S",1
"lib2","SARS-CoV-2","AAGCCCGTGCAAAGTA",1,17.31,10.79,-0.05,0.09,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCCCGTTTTCCTCT",1,6.56,8.68,-2.16,0.05,2.85,1.01,0,">1 nonsynonymous","N118H T170F",2
"lib2","SARS-CoV-2","AAGCCCTCAAATGGCT",5,16.64,7.12,-3.71,0.39,1.5,1.11,0.05,">1 nonsynonymous","G9F D68I",2
"lib2","SARS-CoV-2","AAGCCCTCACTTCATC",8,106.05,10.66,-0.17,0.03,2.93,1.07,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","AAGCCCTCCCTATGAC",2,52.37,10.72,-0.12,0.06,2.78,1.23,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","AAGCCCTCCTTGGGTA",13,64.82,7.83,-3.01,0.14,1.5,1.08,0.01,">1 nonsynonymous","A22Q A42D D90H K128M F134L P149N",6
"lib2","SARS-CoV-2","AAGCCCTGGAATAAAT",2,20.75,10.89,0.05,0.08,2.93,1.05,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","AAGCCCTTCAGACATT",6,37.1,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A22Y S69V K94N T148S T170F",5
"lib2","SARS-CoV-2","AAGCCCTTCGCTAGAG",1,5.95,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","F47R L122S R124H G152V",4
"lib2","SARS-CoV-2","AAGCCGAAACTGAAAG",4,75.39,9.11,-1.73,0.09,2.53,1.04,0,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","AAGCCGAGACAATTGG",3,31.72,10.79,-0.05,0.04,2.97,1.05,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","AAGCCGAGTAAGATGA",4,11.11,10.52,-0.31,0.07,2.98,1.01,0,">1 nonsynonymous","T46L L60R",2
"lib2","SARS-CoV-2","AAGCCGCACCTAACAA",3,49.21,10.69,-0.14,0.03,2.99,1,0,"1 nonsynonymous","S164W",1
"lib2","SARS-CoV-2","AAGCCGCACGAACTCA",6,155.65,8.96,-1.87,0.07,2.74,1.07,0,">1 nonsynonymous","L95M Y119F P149L",3
"lib2","SARS-CoV-2","AAGCCGCAGGTATTGA",7,18.4,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T3P F62V P96V C102I K198G",5
"lib2","SARS-CoV-2","AAGCCGCGCAACCAAT",10,80.02,8.57,-2.27,0.13,1.66,1.1,0.01,">1 nonsynonymous","A81Y P149C",2
"lib2","SARS-CoV-2","AAGCCGCGTATTCTTT",5,104.19,10.85,0.01,0.03,2.98,1.03,0,"1 nonsynonymous","Y39A",1
"lib2","SARS-CoV-2","AAGCCGGAAAATAATA",7,60.19,9.19,-1.64,0.07,2.88,1.09,0,">1 nonsynonymous","P149L G166T",2
"lib2","SARS-CoV-2","AAGCCGGACTATAGTT",8,180.15,10.11,-0.72,0.04,2.94,1.07,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","AAGCCGGCACACAGGC",7,0.76,NA,NA,NA,NA,NA,NA,"stop","T55C A67V Q84* T140W Q144E P149T H189Y",7
"lib2","SARS-CoV-2","AAGCCGGCTAGATGTG",4,10.3,6.67,-4.17,0.29,2.16,1.16,0.01,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","AAGCCGGTCGATATAA",6,46.51,10.88,0.05,0.04,2.99,1.03,0,">1 nonsynonymous","K128S Q163G",2
"lib2","SARS-CoV-2","AAGCCGTGCCAAGATT",6,2.88,NA,NA,NA,NA,NA,NA,"stop","R16* S45M V103T R136H S200*",5
"lib2","SARS-CoV-2","AAGCCTAAAATAGCAT",5,20.64,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","C49R T100S",2
"lib2","SARS-CoV-2","AAGCCTAATTTCACTA",1,6.78,9.91,-0.93,0.2,2.4,1.05,0.02,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","AAGCCTACAAAAAGAA",5,60.29,7.97,-2.87,0.24,1.5,1.08,0.02,"1 nonsynonymous","G101C",1
"lib2","SARS-CoV-2","AAGCCTAGATGACAAT",1,14.02,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P96N E141R P161V",3
"lib2","SARS-CoV-2","AAGCCTAGTAACAACG",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y D68F",2
"lib2","SARS-CoV-2","AAGCCTATCATATTTT",2,31.64,10.69,-0.15,0.09,2.79,1.1,0,"1 nonsynonymous","A22Y",1
"lib2","SARS-CoV-2","AAGCCTATCATCCCGT",10,253.01,10.8,-0.03,0.05,2.89,1.12,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","AAGCCTCAACAGAGGC",1,13.99,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A81E T85V D112E N130R R136S T201L",6
"lib2","SARS-CoV-2","AAGCCTCAACGAAAAT",5,8.31,7.33,-3.51,0.37,1.5,1.07,0.04,">1 nonsynonymous","A14Q N64V T85S I88T E135T",5
"lib2","SARS-CoV-2","AAGCCTCAATGGGACG",6,1.57,NA,NA,NA,NA,NA,NA,"stop","A14S Y35K E76* I88G P96D A145K",6
"lib2","SARS-CoV-2","AAGCCTCAGGAAGTTC",5,66.61,10.73,-0.1,0.07,2.88,1.12,0,"1 nonsynonymous","S53R",1
"lib2","SARS-CoV-2","AAGCCTCATACACTGA",7,143.76,10.47,-0.36,0.05,2.89,1.09,0,">1 nonsynonymous","D97I L122T Q144R",3
"lib2","SARS-CoV-2","AAGCCTCCAAGAGACT",3,6.86,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K56V P96Q N120Q V180H",4
"lib2","SARS-CoV-2","AAGCCTCCCGGCACAT",6,77.06,10.06,-0.78,0.11,2.66,1.03,0,">1 nonsynonymous","A14T A33C V115A",3
"lib2","SARS-CoV-2","AAGCCTCGAAACCCAG",3,38.67,10.39,-0.44,0.05,2.99,1.04,0,">1 nonsynonymous","L122M P149Q P169I",3
"lib2","SARS-CoV-2","AAGCCTCGACTAACAG",3,48.46,8.28,-2.55,0.14,2.61,1.09,0.01,">1 nonsynonymous","P7S I142G",2
"lib2","SARS-CoV-2","AAGCCTCTAAATTGGA",2,112.25,9.96,-0.87,0.04,2.94,1.05,0,">1 nonsynonymous","K87S E141Y",2
"lib2","SARS-CoV-2","AAGCCTGCAAAAACGA",1,0.74,NA,NA,NA,NA,NA,NA,"stop","S41N Y50* F99W W106* R124K P133S T140Y E154V Y175S",9
"lib2","SARS-CoV-2","AAGCCTGCATCTTTTA",5,41.03,9.65,-1.19,0.09,2.05,1.08,0,">1 nonsynonymous","V37I K94F L125I",3
"lib2","SARS-CoV-2","AAGCCTGCCATTGCAT",4,57.99,9.71,-1.13,0.06,2.63,1.08,0,">1 nonsynonymous","S19Q N40R K199G",3
"lib2","SARS-CoV-2","AAGCCTGCTGATGTTA",1,11.82,9.62,-1.22,0.13,2.55,1.03,0.01,">1 nonsynonymous","F17L V37T",2
"lib2","SARS-CoV-2","AAGCCTGGCACCTGAC",1,8.98,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14K R27S F99D K128T P149R",5
"lib2","SARS-CoV-2","AAGCCTGGCTGCGACA",11,140.42,8.62,-2.22,0.06,1.78,1.09,0,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","AAGCCTGTCCAAGACT",3,20.79,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","T63N E135G F156H G172V",4
"lib2","SARS-CoV-2","AAGCCTGTCTCCAGAC",6,83.75,9.95,-0.88,0.06,2.76,1.12,0,">1 nonsynonymous","T148V G152I",2
"lib2","SARS-CoV-2","AAGCCTTAATGTATAA",4,63.46,8.25,-2.59,0.14,1.96,1.09,0.01,">1 nonsynonymous","K56G K128F I142R",3
"lib2","SARS-CoV-2","AAGCCTTCTAGAACTA",11,416.7,9.53,-1.31,0.04,2.83,1.07,0,">1 nonsynonymous","T3L S43C Y159W",3
"lib2","SARS-CoV-2","AAGCCTTGGAACTTTC",10,141.91,9.66,-1.18,0.06,1.95,1.04,0,">1 nonsynonymous","F8T T55H D98S",3
"lib2","SARS-CoV-2","AAGCGAAAATCACATA",5,116.25,8.81,-2.03,0.15,1.67,1.13,0.01,">1 nonsynonymous","C6L F44R T201D",3
"lib2","SARS-CoV-2","AAGCGAAACAAACAAG",7,43.38,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L57G D90I G146V V181H",4
"lib2","SARS-CoV-2","AAGCGAAACAAGTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W V52S D90P E141Q",4
"lib2","SARS-CoV-2","AAGCGAAACACTCTCG",1,38.77,10.79,-0.04,0.06,2.91,1.12,0,">1 nonsynonymous","T100M T201I",2
"lib2","SARS-CoV-2","AAGCGAAATAAAATAA",9,26.76,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","L57H V77G Y178S",3
"lib2","SARS-CoV-2","AAGCGAAATCAGGACG",9,54.41,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","G74A P82S R124N",3
"lib2","SARS-CoV-2","AAGCGAACACTGGGCT",1,13.71,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","S45M E76I K114V S200P",4
"lib2","SARS-CoV-2","AAGCGAACCAATGAGT",16,134.52,9.37,-1.47,0.08,1.9,1.03,0,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","AAGCGAACCCAGAGTC",1,11.69,8.1,-2.74,0.38,1.76,1.19,0.06,">1 nonsynonymous","Y50F K87M N107T",3
"lib2","SARS-CoV-2","AAGCGAATGGTGATGG",1,10.1,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","S108P N118H S129K G155I",4
"lib2","SARS-CoV-2","AAGCGACATACGATTT",12,330.59,9.86,-0.98,0.02,2.95,1.04,0,">1 nonsynonymous","L60T F126V K198M",3
"lib2","SARS-CoV-2","AAGCGACATATACCTA",1,17.35,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","C6D Y39L F47S G51N R78Q G152V P169L",7
"lib2","SARS-CoV-2","AAGCGACCAAATCTGG",4,73.7,8.42,-2.42,0.25,1.5,1,0.03,">1 nonsynonymous","F47Y Y91K S129L",3
"lib2","SARS-CoV-2","AAGCGACCAGTGGATC",3,113.63,10.61,-0.22,0.04,2.86,1.1,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","AAGCGACCCATTGTTC",5,2.12,NA,NA,NA,NA,NA,NA,"stop","R16K T140N S147*",3
"lib2","SARS-CoV-2","AAGCGACCTACTACCG",14,78.61,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6S L57V P96H S184I",4
"lib2","SARS-CoV-2","AAGCGACGAGTCGACA",13,97.28,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","P7M F44R V65G L122Q N130L G146C",6
"lib2","SARS-CoV-2","AAGCGACGTAATAGAC",4,0,NA,NA,NA,NA,NA,NA,"stop","Y21* G86E",2
"lib2","SARS-CoV-2","AAGCGACTATAGAATG",17,69.33,7.55,-3.29,0.14,1.5,1.12,0.01,">1 nonsynonymous","D90L Y119I E141P",3
"lib2","SARS-CoV-2","AAGCGACTGTCCGTAG",5,15.51,9.81,-1.03,0.25,1.52,1.09,0.04,">1 nonsynonymous","Y123T I138F",2
"lib2","SARS-CoV-2","AAGCGACTTGTACACA",5,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M V20L G86M A105V",4
"lib2","SARS-CoV-2","AAGCGAGACAATCCAG",12,181.98,10.8,-0.04,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCGAGAGTTAGAGT",4,124.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19K R127I C150Y",3
"lib2","SARS-CoV-2","AAGCGAGATGTGCTAC",11,140.23,10.73,-0.11,0.03,2.92,1.1,0,">1 nonsynonymous","T55V E141S",2
"lib2","SARS-CoV-2","AAGCGAGGAAAATTCA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","D98* A105V",2
"lib2","SARS-CoV-2","AAGCGAGGTGAGCGAG",12,44.43,6,-4.84,2,1.5,1.37,0.07,">1 nonsynonymous","F47I D90H P96D G116W",4
"lib2","SARS-CoV-2","AAGCGAGTTTAATGAG",6,38.03,9.47,-1.36,0.08,2.7,1.12,0,">1 nonsynonymous","L5D G146R",2
"lib2","SARS-CoV-2","AAGCGATAAGCATCAT",4,40.33,8.42,-2.41,0.17,1.5,1.07,0.01,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","AAGCGATACCTTGCAA",9,30.57,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","I80K A89Y V103I D137M",4
"lib2","SARS-CoV-2","AAGCGATTCCATCATT",12,60.56,8.93,-1.91,0.15,1.62,1.16,0.01,">1 nonsynonymous","L5P F12E N110R",3
"lib2","SARS-CoV-2","AAGCGATTTACTGGTG",10,0.05,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib2","SARS-CoV-2","AAGCGCAAAGGGAACG",3,16.38,10.36,-0.47,0.08,2.96,1,0,">1 nonsynonymous","N4I K87V",2
"lib2","SARS-CoV-2","AAGCGCAACCTAACAG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","Y35S P82* A105T F167S",4
"lib2","SARS-CoV-2","AAGCGCAAGCCAATAA",6,3.69,NA,NA,NA,NA,NA,NA,"stop","K56* D98* R124S T140S",4
"lib2","SARS-CoV-2","AAGCGCACAAATAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6M D90V P177*",3
"lib2","SARS-CoV-2","AAGCGCACACTATTCG",7,160.45,9.02,-1.81,0.04,2.91,1.07,0,">1 nonsynonymous","I2H A42G D90R L125R",4
"lib2","SARS-CoV-2","AAGCGCACAGGTAGAT",3,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S C158Y V173S",3
"lib2","SARS-CoV-2","AAGCGCACGTATAACA",8,11.46,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V37F S41Y V52S R124W Q168M V173P K199N",7
"lib2","SARS-CoV-2","AAGCGCAGCGCAATAA",8,121.58,10.22,-0.62,0.04,2.84,1.02,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","AAGCGCATAAAGTGCC",2,9.11,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N13R T85Y Y121L Q176L",4
"lib2","SARS-CoV-2","AAGCGCATTCTGCATT",13,114.16,8.94,-1.9,0.17,1.5,1.11,0.01,">1 nonsynonymous","Y50M D90R",2
"lib2","SARS-CoV-2","AAGCGCCAACACCACA",5,25.81,10.49,-0.34,0.07,3,1,0,">1 nonsynonymous","F8Y K48M",2
"lib2","SARS-CoV-2","AAGCGCCAATTATCTG",2,5.86,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F17N C61R A105H Y175E",4
"lib2","SARS-CoV-2","AAGCGCCCGCAGAGTT",22,132.3,6,-4.84,2,1.5,1.23,0.01,"1 nonsynonymous","V71R",1
"lib2","SARS-CoV-2","AAGCGCCGTAAGGCTA",17,213.77,10.19,-0.64,0.04,2.76,1.03,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","AAGCGCCTAGGAGAAA",6,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V A14I V37A K48P L95S T100P G152M V173P",8
"lib2","SARS-CoV-2","AAGCGCGAAAATCAGT",20,224.59,10.53,-0.31,0.03,2.95,1.04,0,">1 nonsynonymous","E154M V173F",2
"lib2","SARS-CoV-2","AAGCGCTAGGACCCAG",3,20.75,7.13,-3.7,0.45,1.5,1.02,0.07,"1 nonsynonymous","R124W",1
"lib2","SARS-CoV-2","AAGCGCTCTGCGCACA",5,105.3,9.8,-1.04,0.02,2.91,1.08,0,"1 nonsynonymous","N171G",1
"lib2","SARS-CoV-2","AAGCGCTGATATAATT",5,147.5,10.66,-0.17,0.04,2.95,1.05,0,">1 nonsynonymous","L5T K48S",2
"lib2","SARS-CoV-2","AAGCGCTTACGATCCT",2,2.51,NA,NA,NA,NA,NA,NA,"stop","S36G R136E I142* G174F",4
"lib2","SARS-CoV-2","AAGCGGAAAAATAAAC",14,180.62,10.7,-0.14,0.03,2.96,1.05,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","AAGCGGACAAATCACT",7,40.04,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A14F P133F P161D",3
"lib2","SARS-CoV-2","AAGCGGAGACACTCTG",3,3.77,NA,NA,NA,NA,NA,NA,"stop","T55* A105W L131F",3
"lib2","SARS-CoV-2","AAGCGGATAATTATTA",2,63.25,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35D Y50C D59T F167N",4
"lib2","SARS-CoV-2","AAGCGGATATGCCTGC",3,89.99,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F17D L38I E135T N151P",4
"lib2","SARS-CoV-2","AAGCGGCGGAGATAAA",4,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y V103N G172L",3
"lib2","SARS-CoV-2","AAGCGGGACACGTCAG",1,20.19,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T46A V77K N107H P169S",4
"lib2","SARS-CoV-2","AAGCGGGACATACGAA",2,39.28,10.75,-0.09,0.04,3,1,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","AAGCGGGATTACCTTA",8,83.23,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R25I G117D T170C S184Y",4
"lib2","SARS-CoV-2","AAGCGGGGTGGAACAC",4,43.65,10.83,0,0.05,2.98,1.04,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","AAGCGGGTATCAGTTT",4,31.52,9.09,-1.75,0.1,1.93,1.06,0,"1 nonsynonymous","F12G",1
"lib2","SARS-CoV-2","AAGCGGGTGGTGTCAC",7,180.94,9.7,-1.14,0.03,2.72,1.1,0,">1 nonsynonymous","C61A Y121V",2
"lib2","SARS-CoV-2","AAGCGGTAAGCGGCTT",3,52.02,10.15,-0.68,0.07,2.76,1.07,0,">1 nonsynonymous","V37S F62N T85M",3
"lib2","SARS-CoV-2","AAGCGGTCAGCCAGCT",1,26.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40V K56T Q168N P177T S200D",5
"lib2","SARS-CoV-2","AAGCGGTCGCGCGCAA",9,207.82,10.78,-0.06,0.04,2.93,1.07,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","AAGCGGTTGAATTCCC",3,87.06,10.89,0.05,0.06,2.95,1.04,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","AAGCGTAAAACCTATT",9,22.93,8.96,-1.88,0.21,1.53,1.11,0.02,">1 nonsynonymous","I2C T55V C102W",3
"lib2","SARS-CoV-2","AAGCGTAAAACGGTCT",1,63.45,9.88,-0.96,0.06,2.12,1.08,0,">1 nonsynonymous","F44P I104S",2
"lib2","SARS-CoV-2","AAGCGTAAGTACGTGT",1,16.67,8.6,-2.24,0.16,1.95,1.14,0.01,">1 nonsynonymous","K87M W106S I142F",3
"lib2","SARS-CoV-2","AAGCGTAAGTGTTCAA",3,68.44,10.74,-0.09,0.07,2.82,1.17,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AAGCGTACAGATTTGG",2,30.05,10.09,-0.75,0.11,2.51,1,0.01,">1 nonsynonymous","C6L K26S C61M",3
"lib2","SARS-CoV-2","AAGCGTACATTCAAAA",8,105.22,9.71,-1.12,0.07,2.66,1.06,0,">1 nonsynonymous","N64K Y121K",2
"lib2","SARS-CoV-2","AAGCGTACCGACTCGC",6,98.13,10.93,0.09,0.06,2.98,1.04,0,">1 nonsynonymous","T100R K198L",2
"lib2","SARS-CoV-2","AAGCGTAGCATATGAA",1,5.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S L122K",2
"lib2","SARS-CoV-2","AAGCGTATAATGTACC",9,107.41,8.97,-1.87,0.12,1.63,1.09,0.01,">1 nonsynonymous","W106N T201N",2
"lib2","SARS-CoV-2","AAGCGTATTCCCATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8S A18D P54G A67C E76N G117L K128* G155R L162W",9
"lib2","SARS-CoV-2","AAGCGTCCGCCATTCA",3,94.55,10.7,-0.14,0.03,2.93,1.07,0,">1 nonsynonymous","R16Q T100Q N151S",3
"lib2","SARS-CoV-2","AAGCGTCGAACATAAG",4,42.04,10.3,-0.54,0.03,2.87,1.1,0,">1 nonsynonymous","A14G T148A",2
"lib2","SARS-CoV-2","AAGCGTGAAGTAGTAA",6,25.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17V N107K Q144P",3
"lib2","SARS-CoV-2","AAGCGTGATAATTTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L38* S113N R136C",3
"lib2","SARS-CoV-2","AAGCGTGCAACCCTTA",1,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L V153L",2
"lib2","SARS-CoV-2","AAGCGTGCCACTCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D34N S69F K87* L122R P197H",5
"lib2","SARS-CoV-2","AAGCGTGTCCAACCTT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","C6M A67F T85Y K114L Y143* Q176V",6
"lib2","SARS-CoV-2","AAGCGTTACAATCGAG",3,43.89,10.87,0.04,0.06,2.94,1.09,0,"1 nonsynonymous","L122N",1
"lib2","SARS-CoV-2","AAGCGTTCGACACAGC",8,98,10.82,-0.01,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCGTTGACACGGGG",2,21.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41L V103G K128L V173F P177V",5
"lib2","SARS-CoV-2","AAGCGTTTATCTAAAC",5,169.91,10.88,0.04,0.05,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGCGTTTGCCCCCTT",3,79.28,10.22,-0.62,0.05,2.88,1.03,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","AAGCTAAAAGAACCTT",3,85.42,8.05,-2.79,0.12,2.3,1.04,0.01,">1 nonsynonymous","S41R Y143R H189N",3
"lib2","SARS-CoV-2","AAGCTAAAATAATGGC",9,94.99,9.65,-1.18,0.04,2.93,1.08,0,">1 nonsynonymous","S53D D59A Y66I N171L",4
"lib2","SARS-CoV-2","AAGCTAAACGCTATTC",2,62.87,10.22,-0.61,0.08,2.7,1,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","AAGCTAAAGGAGATAT",3,29.32,9.28,-1.56,0.1,2.62,1.09,0,">1 nonsynonymous","C6G Y39Q P169Y P197T",4
"lib2","SARS-CoV-2","AAGCTAAATAACACAC",2,33.97,10.03,-0.81,0.08,2.72,1.16,0,">1 nonsynonymous","A14S S41F I138L E154P",4
"lib2","SARS-CoV-2","AAGCTAACCCAAAACA",9,132.7,10.16,-0.68,0.06,2.68,1.08,0,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","AAGCTAACCGTCCCAG",4,26.17,10.32,-0.51,0.09,2.73,1.21,0,"1 nonsynonymous","Y91I",1
"lib2","SARS-CoV-2","AAGCTAACCTTTAATA",9,363.09,10.73,-0.1,0.03,2.95,1.06,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","AAGCTAACGACGACAG",2,124.55,8.49,-2.35,0.08,2.64,1.05,0,">1 nonsynonymous","L5H G152Y T170C",3
"lib2","SARS-CoV-2","AAGCTAAGCCCCACAA",2,44.88,10.95,0.11,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCTAAGGTGGTTTG",9,5.92,NA,NA,NA,NA,NA,NA,"stop","T15Y V103G Y119* F126P S147Y",5
"lib2","SARS-CoV-2","AAGCTAAGTTAAATAT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","G83S L122A G166*",3
"lib2","SARS-CoV-2","AAGCTAATAATTCTTA",16,135.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D34A D68F Y91F D112T L122M I142D",6
"lib2","SARS-CoV-2","AAGCTAATAGATGAAC",2,55.41,10.13,-0.71,0.07,2.67,1,0,"1 nonsynonymous","I104H",1
"lib2","SARS-CoV-2","AAGCTAATCTAAGAAT",6,12.75,8.23,-2.61,0.17,1.94,1.11,0.01,">1 nonsynonymous","C6E N107S",2
"lib2","SARS-CoV-2","AAGCTACAACTCTTCA",1,100.55,6.62,-4.22,0.47,1.5,1.21,0.02,">1 nonsynonymous","G9A I88W N171H",3
"lib2","SARS-CoV-2","AAGCTACCAAACAGTA",1,25.07,10.41,-0.42,0.05,2.94,1.09,0,"1 nonsynonymous","G166N",1
"lib2","SARS-CoV-2","AAGCTACCACACCAAC",11,49.3,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N4P F12Q R78S I88V N107S K114Q L187I",7
"lib2","SARS-CoV-2","AAGCTACCGTAACTGA",4,0.25,NA,NA,NA,NA,NA,NA,"stop","L60C T100* D112K N157M",4
"lib2","SARS-CoV-2","AAGCTACCTCTGTAAG",3,13.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12V V20R N24W K87W I138M Q168N",6
"lib2","SARS-CoV-2","AAGCTACGAGCACCAT",4,61.86,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T63Q P82F E135G",3
"lib2","SARS-CoV-2","AAGCTACGGCCAATAT",1,23.43,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S29W V37I K94A S113K R124P V153A",6
"lib2","SARS-CoV-2","AAGCTACTACCGTTAA",2,16.06,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V20W S45H",2
"lib2","SARS-CoV-2","AAGCTACTTCTCGCAT",4,64.46,NA,NA,NA,NA,NA,NA,"stop","E10* N107H",2
"lib2","SARS-CoV-2","AAGCTAGAATATACTA",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59M G86I L111K P197M",4
"lib2","SARS-CoV-2","AAGCTAGACCCAACCA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","R25F P82S A89R L95V N120* F156N G166I",7
"lib2","SARS-CoV-2","AAGCTAGCGATGCCGC",2,47.2,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K128P Y159K V173E H189R",4
"lib2","SARS-CoV-2","AAGCTAGGCAATATTG",3,43.32,9.27,-1.57,0.11,2.59,1.1,0.01,">1 nonsynonymous","A105T Y143M",2
"lib2","SARS-CoV-2","AAGCTAGGCACACTTA",7,6.09,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T3C C158D S164Y",3
"lib2","SARS-CoV-2","AAGCTAGGTATAACTA",23,536.2,10.61,-0.23,0.03,2.95,1.05,0,">1 nonsynonymous","K132G G155S P197R",3
"lib2","SARS-CoV-2","AAGCTATACTATCTTC",3,2.1,NA,NA,NA,NA,NA,NA,"stop","L5K F17G G152F G166*",4
"lib2","SARS-CoV-2","AAGCTATACTATTATC",5,143.8,10.67,-0.17,0.02,2.91,1.08,0,">1 nonsynonymous","A33F F44W G83T S129T E141S",5
"lib2","SARS-CoV-2","AAGCTATAGAATTACA",3,21.51,10.72,-0.11,0.09,2.8,1.15,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","AAGCTATATTAAATAT",6,35.93,8.95,-1.89,0.12,1.64,1.12,0.01,"1 nonsynonymous","R25C",1
"lib2","SARS-CoV-2","AAGCTATCGATGGTGG",1,38.61,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6G R25T I142L E154C",4
"lib2","SARS-CoV-2","AAGCTATCGTAAAAAG",13,143.51,8.84,-1.99,0.09,1.96,1.08,0,">1 nonsynonymous","Q84R Y165L",2
"lib2","SARS-CoV-2","AAGCTATGCCAGGTAT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","G9E W23Q D112N L122S V153*",5
"lib2","SARS-CoV-2","AAGCTATTAATTACAT",3,70,9.73,-1.11,0.07,1.92,1.08,0,">1 nonsynonymous","I2Q R27S F99L G152D",4
"lib2","SARS-CoV-2","AAGCTCAAGATGATAA",9,53.16,6.21,-4.62,0.71,1.5,1.24,0.02,">1 nonsynonymous","R73T Y121C S139F",3
"lib2","SARS-CoV-2","AAGCTCATAAAACTAA",6,15.18,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","C31V I72L F167Q V182G",4
"lib2","SARS-CoV-2","AAGCTCATTAGCTGTG",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K F99Y",2
"lib2","SARS-CoV-2","AAGCTCATTATATAAG",2,49.29,8.58,-2.26,0.17,2.51,1.04,0.01,">1 nonsynonymous","K87R P161M",2
"lib2","SARS-CoV-2","AAGCTCATTCAATATA",8,84,8.32,-2.52,0.09,2.18,1.13,0,">1 nonsynonymous","R127S G146T",2
"lib2","SARS-CoV-2","AAGCTCCAGTGGAAAG",24,216.94,10.11,-0.73,0.07,2.03,1.05,0,">1 nonsynonymous","T3V A14T Y91L N171T",4
"lib2","SARS-CoV-2","AAGCTCCCATCCATAA",1,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68R",1
"lib2","SARS-CoV-2","AAGCTCCCCTTATTCT",12,170.45,10.52,-0.32,0.04,2.9,1.06,0,">1 nonsynonymous","N4V K132F",2
"lib2","SARS-CoV-2","AAGCTCCGAATACTCA",4,174.32,8.56,-2.27,0.1,2.92,1.03,0,">1 nonsynonymous","T3N N120E G166V T170R",4
"lib2","SARS-CoV-2","AAGCTCCTACGCAAAA",4,34.59,10.85,0.01,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCTCGAACTAGGAA",7,56.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F99H A105C",2
"lib2","SARS-CoV-2","AAGCTCGACTACTACA",2,10.27,6.66,-4.18,0.56,1.5,1.15,0.05,">1 nonsynonymous","K94P F160S",2
"lib2","SARS-CoV-2","AAGCTCGCTCTTTTGA",5,18.37,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","I28A I88Y",2
"lib2","SARS-CoV-2","AAGCTCGTAGAAGATT",4,52.94,10.81,-0.02,0.07,2.89,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGCTCTAAAACAATT",1,7.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V11N N107V D137T",3
"lib2","SARS-CoV-2","AAGCTCTAAGATAGAC",13,167.5,10.11,-0.73,0.02,2.88,1.06,0,">1 nonsynonymous","C6V T15D",2
"lib2","SARS-CoV-2","AAGCTCTAATTAGGAG",6,134.82,10.82,-0.02,0.04,2.97,1.05,0,">1 nonsynonymous","L38I S43T",2
"lib2","SARS-CoV-2","AAGCTCTACATCGTAA",5,16.6,9.15,-1.69,0.34,1.77,1.11,0.05,">1 nonsynonymous","N13L G83L Y119S P149S R179M",5
"lib2","SARS-CoV-2","AAGCTCTAGAAATTTG",8,109.42,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D34V G51D P133Q F167T",4
"lib2","SARS-CoV-2","AAGCTCTCAACCTACG",4,12.44,10.49,-0.35,0.05,2.88,1.05,0,">1 nonsynonymous","S41H N64W",2
"lib2","SARS-CoV-2","AAGCTCTCCCTTTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* I104K L122K",3
"lib2","SARS-CoV-2","AAGCTCTCGCAATAAA",4,31.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V65D W106N S139L C150L V173L",5
"lib2","SARS-CoV-2","AAGCTCTGAACGAGCC",7,6.43,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F12R G86E E141S T170R L183D",5
"lib2","SARS-CoV-2","AAGCTCTGCACGTATG",6,83.1,10.63,-0.2,0.05,2.91,1.05,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","AAGCTCTTACCGTCCG",7,122.92,10.67,-0.17,0.03,2.98,1.05,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","AAGCTCTTTATTATAA",14,220.25,10.39,-0.45,0.04,2.86,1.1,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","AAGCTGAAACGACGGT",2,17,8.61,-2.23,0.24,1.69,1.04,0.06,">1 nonsynonymous","S41M T55P D112V",3
"lib2","SARS-CoV-2","AAGCTGAAATAAGCTG",10,60.79,7.72,-3.12,0.25,1.5,1.01,0.02,">1 nonsynonymous","N64P A105N P133A",3
"lib2","SARS-CoV-2","AAGCTGAACAAACATA",6,55.07,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F70L L122E G166I",3
"lib2","SARS-CoV-2","AAGCTGACCGTGAGGA",4,36.23,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","A14L Y50R T55A",3
"lib2","SARS-CoV-2","AAGCTGACGGCCTAAC",4,27.02,6,-4.84,2,1.5,1.3,0.05,"1 nonsynonymous","P82Y",1
"lib2","SARS-CoV-2","AAGCTGATAATCCACT",9,120.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G117A Q144I N171D",3
"lib2","SARS-CoV-2","AAGCTGATATAGGCAA",1,29.87,10.76,-0.08,0.05,2.95,1.05,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","AAGCTGATCACTTTTA",15,94.54,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y50W N92V",2
"lib2","SARS-CoV-2","AAGCTGATGAACATTA",1,17.72,9.84,-1,0.04,3,1.02,0,"1 nonsynonymous","Y143W",1
"lib2","SARS-CoV-2","AAGCTGCAAAAAAATG",4,64.08,10.85,0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCTGCCTCAAATGT",4,25.79,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S19M V37T N64I D90V Y143R",5
"lib2","SARS-CoV-2","AAGCTGCGCATGCCAA",27,379.4,10.06,-0.78,0.05,2.63,1.05,0,">1 nonsynonymous","N1G K48N K94N V173E",4
"lib2","SARS-CoV-2","AAGCTGCGGATTTCAC",5,116.51,7.52,-3.32,0.12,1.6,1.07,0,">1 nonsynonymous","V37G E135S Y159P",3
"lib2","SARS-CoV-2","AAGCTGCGTACGCTAA",3,49.39,9.92,-0.91,0.07,2.62,1.01,0,">1 nonsynonymous","K48I G83Q G152Y",3
"lib2","SARS-CoV-2","AAGCTGCTTCAATAAT",5,18.05,7.31,-3.52,0.35,1.5,1.16,0.04,">1 nonsynonymous","I2R K48Y Q84L N110T N120L",5
"lib2","SARS-CoV-2","AAGCTGGACGGCGCCA",2,13.21,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","C49A G152N F167L",3
"lib2","SARS-CoV-2","AAGCTGGATCTAAAGG",1,11.83,8.68,-2.15,0.08,2.97,1.03,0,">1 nonsynonymous","K56Y K87F Y119V",3
"lib2","SARS-CoV-2","AAGCTGGCGCAGTTGG",2,0.28,NA,NA,NA,NA,NA,NA,"stop","N64V G86N W106* E154W",4
"lib2","SARS-CoV-2","AAGCTGGGTACGCGAC",1,9.34,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","E76K G83V Y91H A145L",4
"lib2","SARS-CoV-2","AAGCTGGTATTACCCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","AAGCTGTCACCGATTT",16,157.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14I C31M L95R I142Q E154V",5
"lib2","SARS-CoV-2","AAGCTGTCTCCCTCTT",4,62.35,10.85,0.01,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGCTGTTACATAAAC",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C F62R I104W",3
"lib2","SARS-CoV-2","AAGCTTAAAATGATGT",2,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20F Y21S A33T",3
"lib2","SARS-CoV-2","AAGCTTAAATCAACTA",7,120.94,10.84,0,0.05,2.95,1.06,0,"1 nonsynonymous","L122M",1
"lib2","SARS-CoV-2","AAGCTTAATTGTAACA",10,42.44,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","Y35S K56N I88S",3
"lib2","SARS-CoV-2","AAGCTTACAACACCAT",2,20.79,10.27,-0.56,0.08,2.76,1.08,0,">1 nonsynonymous","A18S P133F",2
"lib2","SARS-CoV-2","AAGCTTACACCAATTG",10,125.97,8.88,-1.95,0.39,1.5,1,0.06,">1 nonsynonymous","C49V A81I K87S Y165S",4
"lib2","SARS-CoV-2","AAGCTTACATACTCTA",2,56.72,9.74,-1.09,0.05,2.86,1.04,0,">1 nonsynonymous","Y35S E154D",2
"lib2","SARS-CoV-2","AAGCTTACATTACTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127D H189T",2
"lib2","SARS-CoV-2","AAGCTTACCTTTAATA",14,363.31,9.97,-0.86,0.03,2.94,1.05,0,">1 nonsynonymous","Y35F A89P F156R",3
"lib2","SARS-CoV-2","AAGCTTACGCCCAAGT",5,32.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T W106S",2
"lib2","SARS-CoV-2","AAGCTTAGAAATGGCT",13,58.8,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G51R F62L G86E A190H",4
"lib2","SARS-CoV-2","AAGCTTAGCCAGAATT",4,24.15,10.93,0.09,0.06,2.93,1.06,0,">1 nonsynonymous","K128M E154R",2
"lib2","SARS-CoV-2","AAGCTTAGTACTTTAG",6,31.88,7.67,-3.17,0.16,1.5,1.06,0.01,">1 nonsynonymous","F134I G155P",2
"lib2","SARS-CoV-2","AAGCTTAGTAGCCATC",6,77.08,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N24L A42N T148D G172D",4
"lib2","SARS-CoV-2","AAGCTTATATCACATG",1,9.28,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10W I28P",2
"lib2","SARS-CoV-2","AAGCTTCAACGCCTCA",3,52.02,10.27,-0.56,0.07,2.72,1.06,0,">1 nonsynonymous","V77L E135N",2
"lib2","SARS-CoV-2","AAGCTTCATGCTTATT",1,10.56,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","A18R V37Q A42D K56M K94R S129V E141A F167V",8
"lib2","SARS-CoV-2","AAGCTTCATTACCCGT",2,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D N92L L125C",3
"lib2","SARS-CoV-2","AAGCTTCCCGATTGCG",8,20.69,6,-4.84,2,3,1.18,0,">1 nonsynonymous","T3F G152C P161S P169A",4
"lib2","SARS-CoV-2","AAGCTTCTGTGGACTG",2,6.38,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R73E A89S F99C A105V T201G",5
"lib2","SARS-CoV-2","AAGCTTGAATACCAGA",1,11.57,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","R27M T55W K94D I142V P149N",5
"lib2","SARS-CoV-2","AAGCTTGCGGCAAAGT",2,61.22,9.33,-1.51,0.03,2.96,1.04,0,">1 nonsynonymous","K87V N120C G155D",3
"lib2","SARS-CoV-2","AAGCTTGGAGGATATC",1,20.61,6,-4.84,2,3,1,0,">1 nonsynonymous","T100Y Q176P",2
"lib2","SARS-CoV-2","AAGCTTGTACAACATG",4,24.03,10.22,-0.62,0.07,2.97,1.03,0,"1 nonsynonymous","I142Q",1
"lib2","SARS-CoV-2","AAGCTTGTCAGCGATA",5,37.12,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Y91S R127D",2
"lib2","SARS-CoV-2","AAGCTTGTGGAGATCA",3,3.82,NA,NA,NA,NA,NA,NA,"stop","S41P K56M D68*",3
"lib2","SARS-CoV-2","AAGCTTTAAAAAGACA",5,106.16,7.86,-2.97,0.11,2.23,1.12,0,">1 nonsynonymous","I138N G172A",2
"lib2","SARS-CoV-2","AAGCTTTAGTCACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N40G P82K G86* D112L F185W",5
"lib2","SARS-CoV-2","AAGCTTTCCAAGAATA",10,97.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5C L38I P96H V103I",4
"lib2","SARS-CoV-2","AAGCTTTCTACGTATG",3,43.34,10.63,-0.2,0.04,2.96,1.03,0,">1 nonsynonymous","D59N G152R",2
"lib2","SARS-CoV-2","AAGCTTTCTCAACGAA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","AAGCTTTCTTATACAG",1,42.84,10.87,0.03,0.06,2.88,1.12,0,"1 nonsynonymous","V115P",1
"lib2","SARS-CoV-2","AAGCTTTGCTGCATTA",3,9.2,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","E10V S108K",2
"lib2","SARS-CoV-2","AAGCTTTTAAAGCACG",3,9.17,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","R16K T46S Y50R D59S T100D W106D K199S",7
"lib2","SARS-CoV-2","AAGCTTTTCATAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y21* N118T",2
"lib2","SARS-CoV-2","AAGGAAAAAAGACAAC",11,312.74,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A18T V37N S129N G146A P177E",5
"lib2","SARS-CoV-2","AAGGAAAAATCTTCTA",6,43.03,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S36G K48S T55D Q84D D90Y G152P",6
"lib2","SARS-CoV-2","AAGGAAAACACATGAC",3,8.68,6.44,-4.4,0.51,1.5,1.01,0,">1 nonsynonymous","C6M Q84L F126D I142C P149M",5
"lib2","SARS-CoV-2","AAGGAAAACGCACCCG",8,140.62,9.95,-0.89,0.03,2.93,1.03,0,">1 nonsynonymous","N4H K87E",2
"lib2","SARS-CoV-2","AAGGAAAACTAAATAT",5,71.52,10.32,-0.52,0.05,2.9,1,0,">1 nonsynonymous","S45P C195S",2
"lib2","SARS-CoV-2","AAGGAAAATTCCTCTG",2,11.4,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39D N64Y G146V V181W T201S",5
"lib2","SARS-CoV-2","AAGGAAACATATCCCC",1,14.81,10.74,-0.1,0.05,3,1,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","AAGGAAACGGGTTCCA",6,62.26,10.03,-0.81,0.08,2.54,1.14,0,"1 nonsynonymous","N13C",1
"lib2","SARS-CoV-2","AAGGAAACTTCCCATT",2,107.98,8.3,-2.53,0.11,1.84,1.12,0,">1 nonsynonymous","I2L V37A K132W P177S S200Y",5
"lib2","SARS-CoV-2","AAGGAAAGAGCTAAGT",1,16.07,10.8,-0.04,0.05,2.99,1.05,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","AAGGAAAGGCCTTTTT",15,68.42,8.97,-1.86,0.17,1.5,1.04,0.01,">1 nonsynonymous","F47Y T55V S139L",3
"lib2","SARS-CoV-2","AAGGAAAGGTGGTGAA",3,52.43,10.8,-0.04,0.04,2.98,1.03,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","AAGGAAAGTAGACCGT",14,60.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I T55F G152C",3
"lib2","SARS-CoV-2","AAGGAAATAGACGTCA",2,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M Y35S N64S L95H I142R",5
"lib2","SARS-CoV-2","AAGGAAATCGCGTAAG",2,18.05,7.11,-3.73,0.41,1.5,1.12,0.03,">1 nonsynonymous","N118C N130H S139I",3
"lib2","SARS-CoV-2","AAGGAAATCTGAGAAC",2,9.35,8.87,-1.97,0.2,2.19,1.06,0.01,">1 nonsynonymous","G51F L125V T201I",3
"lib2","SARS-CoV-2","AAGGAACAAACTCAAT",17,281.09,8.25,-2.58,0.12,2.16,1.06,0.01,">1 nonsynonymous","V65S G83F Y119T S147L",4
"lib2","SARS-CoV-2","AAGGAACAAGTAGAGG",2,23.03,7.09,-3.74,0.37,1.5,1.12,0.04,">1 nonsynonymous","A14N W23K",2
"lib2","SARS-CoV-2","AAGGAACAATTTAATG",3,13.5,6.31,-4.52,0.48,1.5,1.11,0.01,">1 nonsynonymous","L95F Y175A",2
"lib2","SARS-CoV-2","AAGGAACATACAGAGT",13,114.69,10.68,-0.15,0.02,2.97,1.05,0,">1 nonsynonymous","C61S G83N",2
"lib2","SARS-CoV-2","AAGGAACATGTAGCAT",6,12.13,6,-4.84,2,1.5,1.13,0.07,">1 nonsynonymous","Y119P R124C",2
"lib2","SARS-CoV-2","AAGGAACATTAGGTTA",3,72.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D98G I138N G172W",3
"lib2","SARS-CoV-2","AAGGAACCACGACCAA",4,19.84,10.74,-0.1,0.04,2.99,1.02,0,">1 nonsynonymous","K114I V153S",2
"lib2","SARS-CoV-2","AAGGAACCATTAACCT",19,101.02,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14F V103W",2
"lib2","SARS-CoV-2","AAGGAACCGTCTCAAA",5,40.56,8.22,-2.62,0.13,1.61,1.07,0.01,">1 nonsynonymous","D112V P133M",2
"lib2","SARS-CoV-2","AAGGAACCTAAATGAC",5,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85C I104S F160Y V182R",4
"lib2","SARS-CoV-2","AAGGAACCTCCGGATA",5,0.27,NA,NA,NA,NA,NA,NA,"stop","K48S S139* G166P",3
"lib2","SARS-CoV-2","AAGGAACTAACCCCAA",4,79.54,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K87R L95V C150Q Y159G",4
"lib2","SARS-CoV-2","AAGGAACTAGATGATG",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S W23R R78H I104M Y178H",5
"lib2","SARS-CoV-2","AAGGAACTTGGTCTCC",7,64.71,7.88,-2.95,0.24,1.5,1.04,0.01,">1 nonsynonymous","K114Q K128L P161V P197T",4
"lib2","SARS-CoV-2","AAGGAAGAATTCTAGC",3,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N Y66M S129N N151K F156P T201L",6
"lib2","SARS-CoV-2","AAGGAAGACCGAGAAT",7,150.8,10.82,-0.02,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGAAGGTGAAACTA",6,23.26,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","N4S D59L A105P",3
"lib2","SARS-CoV-2","AAGGAAGTTATTCCAA",4,39,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G116Q Y123K F156L Y175R A190I",5
"lib2","SARS-CoV-2","AAGGAATAACAGGCAA",2,48.76,10.88,0.04,0.06,2.97,1.05,0,"1 nonsynonymous","V153Y",1
"lib2","SARS-CoV-2","AAGGAATAGATCCTCA",1,63.89,10.64,-0.2,0.05,2.93,1.05,0,">1 nonsynonymous","T63R D97A T201Y",3
"lib2","SARS-CoV-2","AAGGAATCACAGTCCC",7,72.46,10.05,-0.78,0.05,2.64,1,0,"1 nonsynonymous","P82V",1
"lib2","SARS-CoV-2","AAGGAATCCAACGACT",6,29.82,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V103A L125V C158L",3
"lib2","SARS-CoV-2","AAGGAATCTATATGAA",2,11.54,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12K S19T Y66R G83H F160T L183K",6
"lib2","SARS-CoV-2","AAGGAATGAACCAAAT",5,207.88,10.59,-0.24,0.03,2.98,1.02,0,">1 nonsynonymous","S19A L188E",2
"lib2","SARS-CoV-2","AAGGAATTCGTCTAGC",3,95.58,10.74,-0.1,0.04,2.9,1.09,0,">1 nonsynonymous","A190R K198R",2
"lib2","SARS-CoV-2","AAGGAATTCTAAGAAA",5,71.8,10.5,-0.33,0.04,2.9,1.06,0,">1 nonsynonymous","L60T K132N T201Y",3
"lib2","SARS-CoV-2","AAGGAATTGAACTATG",1,37.45,9.79,-1.05,0.09,1.97,1.02,0,">1 nonsynonymous","T85E W106K",2
"lib2","SARS-CoV-2","AAGGAATTTGCATGCG",9,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11P Y119C",2
"lib2","SARS-CoV-2","AAGGAATTTGTCACAT",4,39.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37L P82A G172T",3
"lib2","SARS-CoV-2","AAGGACAAAGACGACC",3,88.03,10.24,-0.59,0.04,2.93,1,0,">1 nonsynonymous","S43T A105Y",2
"lib2","SARS-CoV-2","AAGGACAAATCCAGCA",13,92.66,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V103F Q144I",2
"lib2","SARS-CoV-2","AAGGACAAATGGACAA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","W23K V37T G172* V173N",4
"lib2","SARS-CoV-2","AAGGACACAGCTCACC",8,46.27,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S53N S69R I80E F167L",4
"lib2","SARS-CoV-2","AAGGACACATGCCGCA",5,46.75,6.14,-4.7,1.01,1.5,1.19,0.04,">1 nonsynonymous","A22T R73K I88K",3
"lib2","SARS-CoV-2","AAGGACACCAGACTAC",2,0.81,NA,NA,NA,NA,NA,NA,"stop","I28F D98L A105* D112G",4
"lib2","SARS-CoV-2","AAGGACAGAAGCTTTT",5,418.34,10.65,-0.19,0.03,2.95,1.03,0,">1 nonsynonymous","N120L T148R",2
"lib2","SARS-CoV-2","AAGGACAGATACGACG",2,10.21,7.71,-3.12,0.37,1.58,1.18,0.04,">1 nonsynonymous","L5T G86D A105S",3
"lib2","SARS-CoV-2","AAGGACAGCAAACTGT",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24G A33Y C102M Y121R T201M",5
"lib2","SARS-CoV-2","AAGGACAGGCTAAATA",4,6.12,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6V A14P S41F C102L",4
"lib2","SARS-CoV-2","AAGGACATACAATCCA",10,77.35,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S19Y Y121W C158I",3
"lib2","SARS-CoV-2","AAGGACATAGACAGAC",4,50.85,8.45,-2.39,0.36,1.5,1,0.06,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","AAGGACATCACAAAGT",1,27.47,9.84,-1,0.06,2.86,1.06,0,"1 nonsynonymous","I142K",1
"lib2","SARS-CoV-2","AAGGACATGGTCAATA",3,14.14,6,-4.84,2,1.5,1.16,0.05,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","AAGGACCAATCGACAA",1,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106F F126Q Q144W Y178H",4
"lib2","SARS-CoV-2","AAGGACCAATTCAAAA",8,81.82,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V103R Y143N G152S",3
"lib2","SARS-CoV-2","AAGGACCATCGAACTG",4,7.01,10.81,-0.02,0.05,3,1.02,0,"1 nonsynonymous","V173R",1
"lib2","SARS-CoV-2","AAGGACCATTCTACGA",2,4.27,NA,NA,NA,NA,NA,NA,"stop","P96R H189N T201*",3
"lib2","SARS-CoV-2","AAGGACCCCAAGGTGG",3,14.83,7.98,-2.86,0.19,1.92,1.02,0.01,">1 nonsynonymous","V37N A105W A145L",3
"lib2","SARS-CoV-2","AAGGACCCGGCCTGCT",14,236.25,10.68,-0.15,0.01,2.93,1.08,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","AAGGACCCTCACTTTA",3,6.38,9.37,-1.47,0.07,2.97,1.02,0,">1 nonsynonymous","A42V Y143V",2
"lib2","SARS-CoV-2","AAGGACCGAGGCCACT",10,152.45,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14C I28T N118A K132G S139C",5
"lib2","SARS-CoV-2","AAGGACCGTATATAAT",1,109.06,9.53,-1.3,0.03,2.94,1.03,0,">1 nonsynonymous","D90L L125T",2
"lib2","SARS-CoV-2","AAGGACCGTGGCCTCC",11,89.36,10.78,-0.05,0.05,2.86,1.12,0,">1 nonsynonymous","T85V F160A T201P",3
"lib2","SARS-CoV-2","AAGGACGGAACTAAAT",7,32.45,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A81Q G86L A105N",3
"lib2","SARS-CoV-2","AAGGACGGACGACAAA",3,13.42,8.29,-2.55,0.16,1.86,1.12,0.01,">1 nonsynonymous","I2V K56Q D112C",3
"lib2","SARS-CoV-2","AAGGACGGCGAAATGA",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H F70K P82T D90I R127K",5
"lib2","SARS-CoV-2","AAGGACGGGTCTAGAC",4,88.84,10.76,-0.07,0.04,2.92,1.1,0,">1 nonsynonymous","E141S A190S",2
"lib2","SARS-CoV-2","AAGGACGTAATGTTGA",4,39.29,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","Y91G F99G G152N T201D",4
"lib2","SARS-CoV-2","AAGGACGTGTCCCTGA",9,39.63,6,-4.84,1.62,3,1.13,0,">1 nonsynonymous","C61V G83D G86R K94G",4
"lib2","SARS-CoV-2","AAGGACTAAATCACAA",4,67.73,10.76,-0.07,0.04,2.93,1.05,0,">1 nonsynonymous","D97V T148Q T201L",3
"lib2","SARS-CoV-2","AAGGACTAATGTAACC",15,50.03,8.92,-1.92,0.2,1.5,1.03,0.02,">1 nonsynonymous","C6V A18K T100N",3
"lib2","SARS-CoV-2","AAGGACTACCGGTCCA",12,107.81,8.37,-2.47,0.12,1.5,1.12,0.01,">1 nonsynonymous","G9N V103A T170A",3
"lib2","SARS-CoV-2","AAGGACTAGCCCAGGA",6,61.31,6.33,-4.51,0.81,1.5,1.28,0.03,">1 nonsynonymous","V37M R127K P133N E141R",4
"lib2","SARS-CoV-2","AAGGACTATCCAGACC",4,37.74,6.31,-4.52,0.55,1.5,1.12,0.03,">1 nonsynonymous","T46S F126V V173T",3
"lib2","SARS-CoV-2","AAGGACTCGAGAACAG",3,23.27,6.8,-4.04,0.57,1.5,1.26,0.04,">1 nonsynonymous","A14R V103M G166N",3
"lib2","SARS-CoV-2","AAGGACTCGCCACTAG",10,14.09,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","N13S A81L G155S P169F S184R",5
"lib2","SARS-CoV-2","AAGGACTGACACTTGC",7,13.8,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G9Y S41C K48S D90T V103I K114T T148R T201V",8
"lib2","SARS-CoV-2","AAGGACTTCAGATACT",5,83.06,10.35,-0.49,0.03,2.94,1.05,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","AAGGACTTCCTTATCA",6,67.04,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L95S L122S E135G R136S P149L",5
"lib2","SARS-CoV-2","AAGGACTTTGCCTTAA",4,69.83,10.55,-0.29,0.05,2.96,1.01,0,">1 nonsynonymous","E10K T85N",2
"lib2","SARS-CoV-2","AAGGAGAAAAACAGAA",2,13.16,7.87,-2.97,0.13,1.5,1,0.01,">1 nonsynonymous","F12P N118D",2
"lib2","SARS-CoV-2","AAGGAGAAATTTTACA",12,1.24,NA,NA,NA,NA,NA,NA,"stop","V52* K94E E141* L162A",4
"lib2","SARS-CoV-2","AAGGAGAACAACTTAG",9,83.42,9.43,-1.4,0.14,1.69,1.08,0.01,">1 nonsynonymous","L60H W106H",2
"lib2","SARS-CoV-2","AAGGAGAAGACATAAA",1,32.29,10.71,-0.13,0.04,3,1.02,0,">1 nonsynonymous","T3E T63V",2
"lib2","SARS-CoV-2","AAGGAGAATAGGCTTT",10,109.94,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A42R Q84L C150R T170H",4
"lib2","SARS-CoV-2","AAGGAGAATTGACTTA",4,8.15,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14W S53L F99R",3
"lib2","SARS-CoV-2","AAGGAGACATGAGCCT",13,148.48,9.9,-0.93,0.06,2.41,1.01,0,">1 nonsynonymous","A14Y V37H",2
"lib2","SARS-CoV-2","AAGGAGACTTTTCCGA",3,22.59,8.67,-2.17,0.14,2.73,1.07,0.01,">1 nonsynonymous","F44N C61K Q144E G155R",4
"lib2","SARS-CoV-2","AAGGAGAGAACTAAGC",1,5.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105G S139V",2
"lib2","SARS-CoV-2","AAGGAGAGCACAACCT",2,62.33,10.87,0.03,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGAGAGGCCTAAAA",19,83.7,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L5Q Y50N C150F",3
"lib2","SARS-CoV-2","AAGGAGATCACCACAG",16,71.22,6.07,-4.76,0.38,1.5,1.15,0,">1 nonsynonymous","F99M E135W",2
"lib2","SARS-CoV-2","AAGGAGATGAAGTACG",6,27.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H Y35R D90W W106I",4
"lib2","SARS-CoV-2","AAGGAGCAAGAGATCT",7,51.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49M V103W L122S P133I",4
"lib2","SARS-CoV-2","AAGGAGCAGAATATAA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","E10L V37* S43P",3
"lib2","SARS-CoV-2","AAGGAGCATAGCCACC",10,212.54,10.89,0.05,0.04,2.9,1.11,0,">1 nonsynonymous","T100R L122S",2
"lib2","SARS-CoV-2","AAGGAGCCGTGACCGA",2,16.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37G G83I L95D N118R",4
"lib2","SARS-CoV-2","AAGGAGCCTTAAAGAT",6,42.97,8.58,-2.26,0.27,1.81,1.17,0.03,">1 nonsynonymous","S45F I142K K198I",3
"lib2","SARS-CoV-2","AAGGAGCGAGAACCAG",11,96.09,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37C K48E Y121G G152S",4
"lib2","SARS-CoV-2","AAGGAGCGTTTATTCG",2,23.39,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L5Q D112I Y119A I138Y A192S",5
"lib2","SARS-CoV-2","AAGGAGCTATCCAGCG",2,35.87,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R124L T201F",2
"lib2","SARS-CoV-2","AAGGAGGATTATGCAG",2,5.64,9.49,-1.34,0.1,1.93,1,0,">1 nonsynonymous","A42Y V77K",2
"lib2","SARS-CoV-2","AAGGAGGCGGTTACGT",7,3.02,NA,NA,NA,NA,NA,NA,"stop","D90H D98M F167* K199I",4
"lib2","SARS-CoV-2","AAGGAGGGTAACACTA",7,76.67,10.9,0.07,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGAGGTCCCACTAG",16,148.44,9.21,-1.63,0.03,2.97,1.07,0,">1 nonsynonymous","G9W V77L Y119N",3
"lib2","SARS-CoV-2","AAGGAGTAAAATATTC",5,10.77,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N4S T15R N92M",3
"lib2","SARS-CoV-2","AAGGAGTCATCTCAAT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L I104D",2
"lib2","SARS-CoV-2","AAGGAGTTGGAACACG",2,32.55,9.34,-1.49,0.06,2.86,1.15,0,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","AAGGAGTTTATAGATC",2,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D C61P Y119N",3
"lib2","SARS-CoV-2","AAGGATAAAGTATCCA",3,16.21,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","N4S T55D N92V L122E",4
"lib2","SARS-CoV-2","AAGGATAACCCTGTAA",7,102.72,9.08,-1.76,0.05,2.92,1.06,0,">1 nonsynonymous","L60K A145F",2
"lib2","SARS-CoV-2","AAGGATAACGTAAAAT",4,148.48,10.11,-0.72,0.08,2.61,1.07,0,">1 nonsynonymous","L60R V71L",2
"lib2","SARS-CoV-2","AAGGATAATAGACCAG",4,29.59,10.16,-0.68,0.13,2.27,1.03,0.01,"1 nonsynonymous","A81I",1
"lib2","SARS-CoV-2","AAGGATAATGGCAATG",8,83.62,10.78,-0.06,0.06,2.91,1.09,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","AAGGATACAACCAAAC",8,111.91,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R27S G172L A190S",3
"lib2","SARS-CoV-2","AAGGATACACAATAAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N92D N118S P149L F167* G174V",5
"lib2","SARS-CoV-2","AAGGATACACAGTTAT",3,32.49,9.33,-1.51,0.07,2.46,1.06,0,">1 nonsynonymous","N64V Q144Y S147Y",3
"lib2","SARS-CoV-2","AAGGATACAGAGCAAG",5,51.14,10.46,-0.38,0.05,2.9,1.11,0,"1 nonsynonymous","Y35T",1
"lib2","SARS-CoV-2","AAGGATACCTATAATC",8,69.82,8.21,-2.62,0.14,2.74,1.06,0.01,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","AAGGATACTTACCACG",2,0.29,NA,NA,NA,NA,NA,NA,"stop","F156E Y165*",2
"lib2","SARS-CoV-2","AAGGATAGGTTTGCGG",9,205.07,10.65,-0.18,0.03,2.95,1.07,0,">1 nonsynonymous","K87R L95I",2
"lib2","SARS-CoV-2","AAGGATAGTATTTCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5M S53W L60R N130*",4
"lib2","SARS-CoV-2","AAGGATATAACAATAA",6,39.96,6,-4.84,2,1.5,1.12,0.02,"1 nonsynonymous","I88Y",1
"lib2","SARS-CoV-2","AAGGATATCACAAAAA",8,2.94,NA,NA,NA,NA,NA,NA,"stop","A42* V52E G86W Y119M L131V",5
"lib2","SARS-CoV-2","AAGGATATCCAATAGG",6,80.13,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","F47S N58Y C150I",3
"lib2","SARS-CoV-2","AAGGATATTACGGGAA",1,11.59,10.43,-0.4,0.07,2.96,1.04,0,">1 nonsynonymous","I80V D97G",2
"lib2","SARS-CoV-2","AAGGATATTGTTGAAA",1,24.86,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35S D98Y D112S P133A",4
"lib2","SARS-CoV-2","AAGGATCACAAGCCGC",4,58.12,7.78,-3.06,0.23,1.5,1.1,0.02,">1 nonsynonymous","Y121E Q144D",2
"lib2","SARS-CoV-2","AAGGATCACCCGTCCA",6,81.46,10.86,0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGATCATTACAGTT",1,57.5,6,-4.84,2,1.5,1.31,0.02,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","AAGGATCCAGAAAAAA",1,37.71,10.81,-0.03,0.04,3,1.01,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","AAGGATCCCCCCACCC",5,40.83,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2T F44R F70I Q79L",4
"lib2","SARS-CoV-2","AAGGATCCTGTACTAA",3,36.98,10.78,-0.06,0.08,2.92,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGGATCCTTACCAAA",7,81.8,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I28P D98K",2
"lib2","SARS-CoV-2","AAGGATCGCCTTTAAA",3,97.33,10.33,-0.51,0.04,2.79,1.05,0,">1 nonsynonymous","Y35T D97S",2
"lib2","SARS-CoV-2","AAGGATGAAATAACCA",1,13.51,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C49F K56T F99V",3
"lib2","SARS-CoV-2","AAGGATGAATGTTATA",2,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K C61R I88N K94P V103Q Y119S P161C Q168R V182H",9
"lib2","SARS-CoV-2","AAGGATGACAAACCGA",10,171.59,8.79,-2.05,0.06,2.87,1.1,0,"1 nonsynonymous","I142D",1
"lib2","SARS-CoV-2","AAGGATGCAATGCTAA",1,12.71,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I2R T15I N107F",3
"lib2","SARS-CoV-2","AAGGATGCCACGACAA",3,25.63,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","A67D",1
"lib2","SARS-CoV-2","AAGGATGGCGTTTGAC",2,7.21,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13S C31M P82H P149I",4
"lib2","SARS-CoV-2","AAGGATGTGACTTATC",4,15.34,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6R L57C Y93D A105V P169Q",5
"lib2","SARS-CoV-2","AAGGATTAAATATTCA",2,8.02,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13H F62R F99I V173D",4
"lib2","SARS-CoV-2","AAGGATTAACATCAAG",1,28.66,10.43,-0.41,0.06,3,1,0,">1 nonsynonymous","P7L K56T",2
"lib2","SARS-CoV-2","AAGGATTACCAGTCCT",5,51.95,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","V65Q W106S L122G G172R",4
"lib2","SARS-CoV-2","AAGGATTACCTATAGT",2,24.43,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A42V N120M C150R",3
"lib2","SARS-CoV-2","AAGGATTATAACATTG",3,5.51,9.17,-1.66,0.21,2.61,1.18,0.02,">1 nonsynonymous","G116S L125H",2
"lib2","SARS-CoV-2","AAGGATTATATCTTTA",6,57.52,9.9,-0.93,0.09,2.55,1.03,0,">1 nonsynonymous","R78I F185G",2
"lib2","SARS-CoV-2","AAGGATTCAAAAATAA",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I K87G D112K",3
"lib2","SARS-CoV-2","AAGGATTGAACCCGCT",7,62.99,10.05,-0.79,0.07,2.82,1.02,0,">1 nonsynonymous","C31L P54K Q84S L111V E141S",5
"lib2","SARS-CoV-2","AAGGATTGATGAAAGA",2,9.14,10.2,-0.63,0.06,3,1.04,0,">1 nonsynonymous","A42E K87Q",2
"lib2","SARS-CoV-2","AAGGATTGCAAACACG",27,111.15,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8L D97L W106L R136Q C158D",5
"lib2","SARS-CoV-2","AAGGATTGGTATGACA",3,8.24,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","G117W V182T",2
"lib2","SARS-CoV-2","AAGGATTTGTAGGAAA",3,21.77,10.76,-0.08,0.05,3,1.04,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","AAGGCAAAATGACTAA",2,31.38,6.83,-4,0.47,2.03,1.09,0.04,">1 nonsynonymous","Y35S N157I",2
"lib2","SARS-CoV-2","AAGGCAAAATTCAAAT",14,52.75,9.2,-1.64,0.2,1.63,1.05,0.02,">1 nonsynonymous","C61Y Y91T",2
"lib2","SARS-CoV-2","AAGGCAAACCTTACTT",7,48.98,7.98,-2.86,0.3,1.5,1.05,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","AAGGCAAAGCAACGGA",14,226.49,10.87,0.04,0.05,2.94,1.07,0,"1 nonsynonymous","I28L",1
"lib2","SARS-CoV-2","AAGGCAAATAAAAGAA",4,75.81,9.13,-1.71,0.08,2.86,1.08,0,"1 nonsynonymous","G146K",1
"lib2","SARS-CoV-2","AAGGCAACAGTTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D34Q D59V G74* F160D",4
"lib2","SARS-CoV-2","AAGGCAACTAGTTGTA",1,48.84,10.82,-0.02,0.02,2.98,1.03,0,"1 nonsynonymous","S184W",1
"lib2","SARS-CoV-2","AAGGCAAGGATTAACT",1,45.25,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","S19L V32L A81Y I104Y I142G Q163S",6
"lib2","SARS-CoV-2","AAGGCAAGTACATATT",3,30.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25L A105C G116P S184A",4
"lib2","SARS-CoV-2","AAGGCAAGTGCTACCA",4,81.17,9.54,-1.3,0.12,1.74,1.07,0.01,">1 nonsynonymous","I2H V37Y L162R",3
"lib2","SARS-CoV-2","AAGGCAATAATAACGT",11,118.19,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","T46L I88D F99T W106F I138W",5
"lib2","SARS-CoV-2","AAGGCAATAATTGTAA",1,5.74,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","G74I N107Y",2
"lib2","SARS-CoV-2","AAGGCAATACTAAAGT",3,2.9,NA,NA,NA,NA,NA,NA,"stop","L60* D90K N130K",3
"lib2","SARS-CoV-2","AAGGCAATAGCCACGC",2,69.5,10.55,-0.28,0.05,2.89,1.06,0,">1 nonsynonymous","T55N D98V G196R",3
"lib2","SARS-CoV-2","AAGGCAATGCAAATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S19L D98* G117L Y178P",4
"lib2","SARS-CoV-2","AAGGCAATGTAGAGAA",4,27.2,10.15,-0.69,0.13,2.5,1,0.01,"1 nonsynonymous","Q163P",1
"lib2","SARS-CoV-2","AAGGCACACAACGAGC",6,24.92,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","I2K S45L C61D W106D K132D",5
"lib2","SARS-CoV-2","AAGGCACACGACCACG",4,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T R27I",2
"lib2","SARS-CoV-2","AAGGCACACTAGCAAC",3,28.29,10.27,-0.56,0.06,2.82,1.08,0,">1 nonsynonymous","D98V S139R",2
"lib2","SARS-CoV-2","AAGGCACACTCAATAG",2,15.78,8.78,-2.06,0.21,1.6,1.4,0.03,">1 nonsynonymous","N40L F134N G155N",3
"lib2","SARS-CoV-2","AAGGCACAGAACTAGG",1,12.93,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","S19R N64I P82M K87R",4
"lib2","SARS-CoV-2","AAGGCACAGAGTACAA",1,41.23,10.53,-0.31,0.05,2.96,1.03,0,">1 nonsynonymous","Y21W V37M T148N",3
"lib2","SARS-CoV-2","AAGGCACTAACATAAT",5,12.93,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41A C49N T55W Q144F G174R",5
"lib2","SARS-CoV-2","AAGGCACTAGTTCGCG",1,23.4,8.41,-2.42,0.13,2.12,1.02,0.01,">1 nonsynonymous","N118F T170F",2
"lib2","SARS-CoV-2","AAGGCACTCGTAGGCC",4,84.41,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R25I R78I Y91K S113R F167Y Y175D P191I",7
"lib2","SARS-CoV-2","AAGGCACTGGACTATG",1,28.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35P V65L D97N Y123D P149M",5
"lib2","SARS-CoV-2","AAGGCAGAATTCCTGA",2,25.87,9.49,-1.35,0.07,2.24,1.03,0,">1 nonsynonymous","C6P S129Y",2
"lib2","SARS-CoV-2","AAGGCAGATACGCAGG",3,18.22,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","G51P E141R G152K R179S",4
"lib2","SARS-CoV-2","AAGGCAGGATGACATA",2,113.1,8.68,-2.16,0.1,2.9,1.07,0,">1 nonsynonymous","A33L F44D G117Y",3
"lib2","SARS-CoV-2","AAGGCATATTTATCGC",1,10.84,9.58,-1.26,0.19,2.17,1.03,0.01,">1 nonsynonymous","S41F W106L",2
"lib2","SARS-CoV-2","AAGGCATTTCGATCAC",1,34.44,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","N4V A18I Y165P",3
"lib2","SARS-CoV-2","AAGGCCAAAATAATAC",2,69.26,10.46,-0.37,0.06,2.92,1.11,0,">1 nonsynonymous","V37F T46H R73M T85S T100V",5
"lib2","SARS-CoV-2","AAGGCCAACTAAAAAC",5,22.28,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G9Q F70I",2
"lib2","SARS-CoV-2","AAGGCCAAGACTAACA",10,192.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37P A81T K94S",3
"lib2","SARS-CoV-2","AAGGCCAATACTACAG",6,52.45,7.36,-3.47,0.29,1.5,1.13,0.02,">1 nonsynonymous","G51R G74H G152L",3
"lib2","SARS-CoV-2","AAGGCCACTAATAACG",7,46.39,10.32,-0.51,0.06,2.75,1,0,">1 nonsynonymous","N64Y P133F",2
"lib2","SARS-CoV-2","AAGGCCAGATAAGAAT",6,1.59,NA,NA,NA,NA,NA,NA,"stop","Y39* P133M E154D V173* V182S",5
"lib2","SARS-CoV-2","AAGGCCAGCATAATTT",4,0,NA,NA,NA,NA,NA,NA,"stop","N40F Y91D D98S L122*",4
"lib2","SARS-CoV-2","AAGGCCCAACGTCTAG",2,5.96,8.74,-2.1,0.2,2.87,1,0.02,"1 nonsynonymous","G117D",1
"lib2","SARS-CoV-2","AAGGCCCATGACAAGC",2,24.24,9.66,-1.18,0.06,2.96,1,0,">1 nonsynonymous","T55L Y91S G166N",3
"lib2","SARS-CoV-2","AAGGCCCCCCGGCAAG",3,37.71,8.56,-2.28,0.13,2.36,1.03,0.01,">1 nonsynonymous","Q84K G117K S139R",3
"lib2","SARS-CoV-2","AAGGCCCCCGCACGTA",1,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","AAGGCCCTAAGGAGTA",13,245.62,10.84,0,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGGCCGGAGAGGACT",1,6.28,6,-4.84,2,1.5,1.14,0.05,"1 nonsynonymous","Y93G",1
"lib2","SARS-CoV-2","AAGGCCGTATAATTTT",5,251.88,9.76,-1.08,0.05,2.13,1.03,0,"1 nonsynonymous","L38N",1
"lib2","SARS-CoV-2","AAGGCCTATACGAGAA",8,0.24,NA,NA,NA,NA,NA,NA,"stop","Y35L Y119*",2
"lib2","SARS-CoV-2","AAGGCCTCCCATCAGT",4,74.87,10.31,-0.52,0.03,2.9,1,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","AAGGCCTCGATCCCCT",11,2.23,NA,NA,NA,NA,NA,NA,"stop","A18S V71N T85F N107P L162* L188G",6
"lib2","SARS-CoV-2","AAGGCCTGCAGCTCGA",4,66.05,10.84,0,0.08,2.92,1.11,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","AAGGCCTTACAATAGG",4,65.41,9.93,-0.91,0.1,2.61,1.19,0,">1 nonsynonymous","G9V R127K",2
"lib2","SARS-CoV-2","AAGGCCTTTGGTCGAA",2,26.46,9.66,-1.17,0.11,2.9,1.08,0,">1 nonsynonymous","T46H G74R",2
"lib2","SARS-CoV-2","AAGGCCTTTTATTATA",20,120.87,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N13L K56V Y91S",3
"lib2","SARS-CoV-2","AAGGCGACGCTACGGT",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T L183Q",2
"lib2","SARS-CoV-2","AAGGCGACTCGCATAA",1,56.38,10.89,0.05,0.03,2.94,1.06,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","AAGGCGATTACATAAG",4,42.42,10.86,0.03,0.06,2.92,1.09,0,">1 nonsynonymous","V37T T148V",2
"lib2","SARS-CoV-2","AAGGCGCACATGAGGT",3,35.84,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N4V S36L L57P P96T G117Y",5
"lib2","SARS-CoV-2","AAGGCGCAGAGTGTTA",8,86.48,10.77,-0.06,0.03,2.92,1.08,0,"1 nonsynonymous","G196E",1
"lib2","SARS-CoV-2","AAGGCGCAGGCCTTCA",1,11.23,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C49R G74A D98M Y121M F160N",5
"lib2","SARS-CoV-2","AAGGCGCGTCTCTGCG",5,53.3,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V37T S69F F99D",3
"lib2","SARS-CoV-2","AAGGCGCTTATAGTCT",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y S43K R124I P149L N151F F185N",6
"lib2","SARS-CoV-2","AAGGCGGCGCTGAATA",7,48.53,9.03,-1.81,0.17,1.55,1.17,0.01,"1 nonsynonymous","F12P",1
"lib2","SARS-CoV-2","AAGGCGGGACGCCAGC",7,1.75,NA,NA,NA,NA,NA,NA,"stop","W23* P149L",2
"lib2","SARS-CoV-2","AAGGCGGTATAAAATT",2,14.72,7.5,-3.34,0.36,1.5,1.15,0.04,">1 nonsynonymous","D68V N120R F134W",3
"lib2","SARS-CoV-2","AAGGCGTACGGAGCAA",11,226.33,10.34,-0.5,0.03,2.8,1.11,0,">1 nonsynonymous","N4I Q84S L95I",3
"lib2","SARS-CoV-2","AAGGCTAAAACTAATA",3,42.17,10.75,-0.08,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGCTAAAGAAGCAA",3,14.77,6.47,-4.37,0.31,3,1.12,0.01,">1 nonsynonymous","N107H C158W",2
"lib2","SARS-CoV-2","AAGGCTAAGACCACTT",3,16.13,10.96,0.12,0.09,2.92,1.02,0,"1 nonsynonymous","K26T",1
"lib2","SARS-CoV-2","AAGGCTACATAAACCG",8,106.14,10.47,-0.37,0.05,2.88,1.04,0,">1 nonsynonymous","N24Q Y91H N120Q",3
"lib2","SARS-CoV-2","AAGGCTACATGATCCT",5,98.67,9.99,-0.84,0.06,2.64,1.02,0,">1 nonsynonymous","C61E F134I",2
"lib2","SARS-CoV-2","AAGGCTACATTATAAC",16,255.43,9.84,-0.99,0.06,2.27,1.04,0,">1 nonsynonymous","R27P T55P N120Y",3
"lib2","SARS-CoV-2","AAGGCTACGCTCCAAT",10,124.77,10.08,-0.76,0.05,3,1,0,">1 nonsynonymous","S129I E154V",2
"lib2","SARS-CoV-2","AAGGCTAGCCCTGCCT",5,43.48,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F99S N120P",2
"lib2","SARS-CoV-2","AAGGCTATAGAGACCA",1,27.98,10.73,-0.11,0.07,3,1.02,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","AAGGCTATTGATACGT",5,74.42,10.61,-0.23,0.07,2.92,1.05,0,">1 nonsynonymous","A190V T201K",2
"lib2","SARS-CoV-2","AAGGCTCAGTCTGGTA",2,18.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35R V65Q D98P",3
"lib2","SARS-CoV-2","AAGGCTCCGGCCTAAC",5,21.97,9.43,-1.41,0.25,1.5,1,0.03,">1 nonsynonymous","I28C W106R",2
"lib2","SARS-CoV-2","AAGGCTCTATCAGTGG",13,1.56,NA,NA,NA,NA,NA,NA,"stop","E76V I88T D97P G146*",4
"lib2","SARS-CoV-2","AAGGCTGAAACCAGCC",2,8.3,9.99,-0.85,0.4,1.66,1.06,0.03,">1 nonsynonymous","F12N V32I",2
"lib2","SARS-CoV-2","AAGGCTGATTACGTAG",8,66.61,9.63,-1.2,0.28,1.5,1,0.03,">1 nonsynonymous","Y50I L57T",2
"lib2","SARS-CoV-2","AAGGCTTAAAGACACG",9,81.47,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F8R G166D",2
"lib2","SARS-CoV-2","AAGGCTTACATACAAA",4,83.74,10.58,-0.26,0.06,2.83,1.12,0,">1 nonsynonymous","S41H P149L C195Y",3
"lib2","SARS-CoV-2","AAGGCTTACATTTCCT",1,40.74,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S36I N58K G86S V181S",4
"lib2","SARS-CoV-2","AAGGCTTTCAATAGGA",6,128.29,10.94,0.11,0.06,2.92,1.08,0,">1 nonsynonymous","K26T R136K",2
"lib2","SARS-CoV-2","AAGGCTTTTATTATTA",10,76.31,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","C6W F126C E135L",3
"lib2","SARS-CoV-2","AAGGCTTTTTTACAAC",2,5.54,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56Q Y91S V103K",3
"lib2","SARS-CoV-2","AAGGGAAAAGAATTGC",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P S41A V103T K132P Y143G",5
"lib2","SARS-CoV-2","AAGGGAAACAATCTAT",2,15.99,10.34,-0.5,0.05,2.99,1.04,0,">1 nonsynonymous","A22K D97C",2
"lib2","SARS-CoV-2","AAGGGAACGCAATTAA",3,17.33,9.57,-1.27,0.17,1.68,1.15,0.01,">1 nonsynonymous","A89H E141M",2
"lib2","SARS-CoV-2","AAGGGAACTCGTCCAA",2,23.89,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","I2T C6P A14S Y39I G51Y T85R N120Q F156P",8
"lib2","SARS-CoV-2","AAGGGAACTGACTAGC",1,7.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C V77M",2
"lib2","SARS-CoV-2","AAGGGAAGAAACTATA",4,9.15,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","I142D L183N",2
"lib2","SARS-CoV-2","AAGGGAAGAACGAGAT",13,200.17,10.81,-0.03,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGGGACAACAATCCA",21,2.07,NA,NA,NA,NA,NA,NA,"stop","A81R Y93M V153* G174V",4
"lib2","SARS-CoV-2","AAGGGACAGGTACAAA",6,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y D98Y D112L L122S Q144W S200D",6
"lib2","SARS-CoV-2","AAGGGACCTCGATTAG",1,17.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I80N N120S S129I",3
"lib2","SARS-CoV-2","AAGGGACGATGCGTCC",10,151.95,6.51,-4.33,0.21,1.5,1.12,0,">1 nonsynonymous","N24L Y121F R136D T201E",4
"lib2","SARS-CoV-2","AAGGGACGCAGACTTT",4,3.12,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib2","SARS-CoV-2","AAGGGACTATATTCTA",4,59.35,10.78,-0.05,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGGAGAACCCTGCC",6,79.78,10.85,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGGAGACATGTCCT",4,41.77,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S19K F44V I80G T85V",4
"lib2","SARS-CoV-2","AAGGGAGAGAAATTCA",7,82.62,6,-4.84,2,3,1.22,0,">1 nonsynonymous","N13D V37H P54E P149I C158F",5
"lib2","SARS-CoV-2","AAGGGAGAGTTGGGGC",9,190.01,10.62,-0.21,0.04,2.96,1.05,0,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","AAGGGAGATGCCGAAC",11,170.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K56Q I88D Y93T T140G G174D P197L T201L",7
"lib2","SARS-CoV-2","AAGGGAGCACACGACG",1,10.76,8.57,-2.27,0.31,2.05,1,0.02,">1 nonsynonymous","N40T Y165V",2
"lib2","SARS-CoV-2","AAGGGAGGAGATAGAC",11,34.92,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N13Y Y21F W106R N151I Y165V",5
"lib2","SARS-CoV-2","AAGGGAGGGTGGCTAC",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T T63M A105K P133Q I142K",5
"lib2","SARS-CoV-2","AAGGGAGGTTACATAC",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Y F134I",2
"lib2","SARS-CoV-2","AAGGGAGTTACATGTA",27,529.74,10.75,-0.09,0.03,2.94,1.08,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","AAGGGATAAATTTGGT",3,50.3,8.88,-1.95,0.05,3,1.01,0,"1 nonsynonymous","Y143E",1
"lib2","SARS-CoV-2","AAGGGATAGCCAATAG",2,8.78,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41G R73L N107H E135P",4
"lib2","SARS-CoV-2","AAGGGATATCTAACCC",2,15.33,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R73E Y119S Q144E C150V V153I Y165P",6
"lib2","SARS-CoV-2","AAGGGATATTAAGAGA",2,15.26,10.26,-0.58,0.09,2.84,1.13,0.01,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","AAGGGATATTCTTCCC",2,1.07,NA,NA,NA,NA,NA,NA,"stop","G9S C49F K56W D68A G146*",5
"lib2","SARS-CoV-2","AAGGGATCATGACGGC",1,5.64,10.18,-0.65,0.08,2.93,1,0,">1 nonsynonymous","L95M S139E",2
"lib2","SARS-CoV-2","AAGGGATCATGATTGT",9,23.88,NA,NA,NA,NA,NA,NA,"stop","N13* S19K I88C",3
"lib2","SARS-CoV-2","AAGGGATTAAACTACC",8,217.15,9.58,-1.26,0.06,2.06,1.07,0,"1 nonsynonymous","F17T",1
"lib2","SARS-CoV-2","AAGGGATTGCCCTAAA",2,67.78,8.35,-2.49,0.27,1.5,1,0.03,">1 nonsynonymous","S41T L60S D97E S139H Q144V",5
"lib2","SARS-CoV-2","AAGGGCAAGCGAACAC",12,134.72,10.74,-0.1,0.05,2.87,1.12,0,">1 nonsynonymous","I2E G9T",2
"lib2","SARS-CoV-2","AAGGGCAAGGGAACAG",4,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N S129T",2
"lib2","SARS-CoV-2","AAGGGCACCAAAATGC",9,119.84,9.19,-1.64,0.09,2.06,1.11,0,">1 nonsynonymous","C61V G86N",2
"lib2","SARS-CoV-2","AAGGGCACCAAGAAAG",9,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L T15N R127L T148L C158F",5
"lib2","SARS-CoV-2","AAGGGCACGGATACTG",2,9.85,6.87,-3.97,0.87,1.5,1.12,0.01,">1 nonsynonymous","R73W G83D Y119H",3
"lib2","SARS-CoV-2","AAGGGCACTGTGGAGA",8,18.6,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49L D137C",2
"lib2","SARS-CoV-2","AAGGGCATATATAATA",1,5.49,10.63,-0.21,0.12,2.98,1.07,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","AAGGGCATCACAGACT",13,115.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86C L95I F126N I138H",4
"lib2","SARS-CoV-2","AAGGGCATTTGTATTC",8,58.13,10.8,-0.04,0.16,2.67,1,0.01,"1 nonsynonymous","S184K",1
"lib2","SARS-CoV-2","AAGGGCCAAATATGCT",16,193.41,8.96,-1.88,0.05,2.7,1.09,0,">1 nonsynonymous","D90L P169D",2
"lib2","SARS-CoV-2","AAGGGCCACGGTAAAA",5,67.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G101D N107L",2
"lib2","SARS-CoV-2","AAGGGCCGCCGCACTC",4,19.54,10.77,-0.07,0.06,2.8,1.19,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","AAGGGCCGGCCCGAGT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K V103D",2
"lib2","SARS-CoV-2","AAGGGCCTAACTTTTC",1,10.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77S P96T",2
"lib2","SARS-CoV-2","AAGGGCGGCGCGGTTG",13,190.98,10.31,-0.52,0.04,2.76,1.05,0,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","AAGGGCGGGCAAAGGA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","I80R F99* P133L",3
"lib2","SARS-CoV-2","AAGGGCGTGGAGTACG",11,3.87,NA,NA,NA,NA,NA,NA,"stop","A42L A89C G166V S184*",4
"lib2","SARS-CoV-2","AAGGGCTACCTTCAAA",9,4.47,NA,NA,NA,NA,NA,NA,"stop","S19N R73* D90T G117S N130T P149C K198L",7
"lib2","SARS-CoV-2","AAGGGCTCACGAACAA",1,11.55,9.13,-1.71,0.18,1.82,1,0.04,">1 nonsynonymous","S19W K199S",2
"lib2","SARS-CoV-2","AAGGGCTGACACATAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","AAGGGCTGGACAGCCT",5,70.14,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","P7I T85V N107L V180N",4
"lib2","SARS-CoV-2","AAGGGCTTTATATTAT",4,16.33,6,-4.84,2,3,1.22,0.01,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","AAGGGGAAACGTACTT",3,60.46,10.76,-0.08,0.04,2.98,1.03,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","AAGGGGAAAGCCAGTC",14,325.3,10.69,-0.14,0.03,2.97,1.03,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","AAGGGGAACCTAAAAT",8,97.25,9.66,-1.17,0.05,2.83,1.1,0,">1 nonsynonymous","G152T F156L V194L",3
"lib2","SARS-CoV-2","AAGGGGATAGAGATAT",5,16.77,7.82,-3.02,0.27,1.5,1.11,0.04,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","AAGGGGCAGGGCGATC",11,166.77,8.98,-1.85,0.16,1.65,1.1,0.01,"1 nonsynonymous","A67H",1
"lib2","SARS-CoV-2","AAGGGGCCACCAATTT",1,13.51,10.89,0.05,0.06,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGGGGCCCTCGGGAC",12,116.14,8.86,-1.98,0.17,1.5,1,0.01,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","AAGGGGCCTGGTAATT",18,140.52,10.18,-0.65,0.07,2.67,1.02,0,">1 nonsynonymous","F44A S53F",2
"lib2","SARS-CoV-2","AAGGGGGAATCATTCG",1,16.01,6.35,-4.49,0.58,1.5,1.15,0.02,">1 nonsynonymous","S29V Y50C",2
"lib2","SARS-CoV-2","AAGGGGGCATTGCGAA",1,172.74,10.13,-0.7,0.05,2.82,1.03,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","AAGGGGGGTGACAGGA",9,8.17,NA,NA,NA,NA,NA,NA,"stop","A14I V65L I104* T201N",4
"lib2","SARS-CoV-2","AAGGGGGTTAACTCAC",14,168.64,6.99,-3.84,0.25,1.5,1.17,0.01,">1 nonsynonymous","S36L A89Q H189Y",3
"lib2","SARS-CoV-2","AAGGGGTAATTATATT",2,26.66,6,-4.84,1.34,1.5,1.2,0.02,">1 nonsynonymous","E10V S113Y G146C",3
"lib2","SARS-CoV-2","AAGGGGTTAATAACAA",3,82.65,9.53,-1.3,0.02,2.95,1.06,0,">1 nonsynonymous","I142N V153S",2
"lib2","SARS-CoV-2","AAGGGGTTGTAACGGT",6,45.02,10.65,-0.18,0.06,2.81,1.18,0,">1 nonsynonymous","T3S N171S",2
"lib2","SARS-CoV-2","AAGGGTAAGAGTAGAT",11,6.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D A33T L60H G101R",4
"lib2","SARS-CoV-2","AAGGGTACCAAACGTT",4,50.16,9.87,-0.97,0.07,2.28,1.12,0,">1 nonsynonymous","P133L V173R",2
"lib2","SARS-CoV-2","AAGGGTATCATATCTC",8,89.51,8.69,-2.15,0.14,1.5,1.12,0.01,">1 nonsynonymous","L5V A105L T140Q",3
"lib2","SARS-CoV-2","AAGGGTCAGACGTACA",5,76.28,7.95,-2.88,0.23,1.5,1.09,0.02,">1 nonsynonymous","A33R Q176S K198A",3
"lib2","SARS-CoV-2","AAGGGTCATAGACTAG",10,62.79,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36C F70I G86V W106Y T193R",5
"lib2","SARS-CoV-2","AAGGGTCATATATCCT",5,36.56,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","F12S V103E Y143N",3
"lib2","SARS-CoV-2","AAGGGTCCAGGGCGTT",2,16.7,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","A81T F167G A190K S200I",4
"lib2","SARS-CoV-2","AAGGGTCCAGTGCCGA",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Q W106S L183N",3
"lib2","SARS-CoV-2","AAGGGTCGATAGCGGC",6,57.26,8.64,-2.19,0.1,2.09,1.08,0,">1 nonsynonymous","N1S N107H",2
"lib2","SARS-CoV-2","AAGGGTCTCAAGCCGT",2,36.19,10.32,-0.51,0.05,2.84,1.04,0,"1 nonsynonymous","A81H",1
"lib2","SARS-CoV-2","AAGGGTGCACTGTGGT",4,14.47,7.56,-3.27,0.19,1.5,1.07,0.03,">1 nonsynonymous","W106S G155L",2
"lib2","SARS-CoV-2","AAGGGTGGAACGTAAA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30Y I80K N157S V181S",4
"lib2","SARS-CoV-2","AAGGGTGGGTCTAATA",6,52.69,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","AAGGGTGTACGAAACC",3,91.46,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16N I28F S164C P177Y",4
"lib2","SARS-CoV-2","AAGGGTGTCCACAAAA",1,17.66,10.8,-0.03,0.06,2.94,1.07,0,">1 nonsynonymous","I2G K87R T201S",3
"lib2","SARS-CoV-2","AAGGGTGTGACTAAAT",6,141.33,9.82,-1.02,0.07,2.16,1.03,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","AAGGGTTCCTATGTCT",4,17.49,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y93W F134H G152T",3
"lib2","SARS-CoV-2","AAGGTAAAAAAAAATT",1,7.79,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A89V N92P T100G",3
"lib2","SARS-CoV-2","AAGGTAAATACGTTAT",7,0,NA,NA,NA,NA,NA,NA,"stop","Y35E R73H G86K P96L F99L S113C C150* K199S",8
"lib2","SARS-CoV-2","AAGGTAACACACTCAA",15,108.79,9.28,-1.56,0.07,1.87,1.08,0,">1 nonsynonymous","G51T G83N S184L",3
"lib2","SARS-CoV-2","AAGGTAAGAACAAAAA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P A42L V52S I88N",4
"lib2","SARS-CoV-2","AAGGTAAGATGAATGC",8,210.13,8.27,-2.56,0.14,1.94,1.05,0.01,">1 nonsynonymous","K26T N40M E135S G166L",4
"lib2","SARS-CoV-2","AAGGTAATCAACAATA",5,45.76,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","I2R V77A T85K Y91N Y123R",5
"lib2","SARS-CoV-2","AAGGTAATCACAACAC",8,177.64,9.85,-0.99,0.06,2.83,1.02,0,">1 nonsynonymous","Y121S S129H",2
"lib2","SARS-CoV-2","AAGGTAATCCTGCTGG",2,0,NA,NA,NA,NA,NA,NA,"stop","A22V V37* F134R",3
"lib2","SARS-CoV-2","AAGGTAATCGACATTC",3,25.82,10.69,-0.15,0.05,2.96,1.05,0,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","AAGGTAATGTCATAAG",2,60.68,10.77,-0.07,0.08,2.83,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGGTAATGTCTAGCA",3,33.76,9.05,-1.79,0.2,1.66,1.09,0.02,">1 nonsynonymous","T15E Y39V S139Y E154M",4
"lib2","SARS-CoV-2","AAGGTACAAAGGGTCG",2,27.48,10.19,-0.65,0.13,2.64,1.15,0.01,">1 nonsynonymous","D59L T85I",2
"lib2","SARS-CoV-2","AAGGTACAAGCCTCAG",7,233.32,8.8,-2.03,0.05,2.96,1.07,0,">1 nonsynonymous","S36K N157H",2
"lib2","SARS-CoV-2","AAGGTACACGCGGTAC",11,100.79,7.98,-2.85,0.18,1.5,1.12,0.01,">1 nonsynonymous","P133I G146R",2
"lib2","SARS-CoV-2","AAGGTACTAAACACTA",9,183.92,10.9,0.06,0.05,2.89,1.13,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","AAGGTACTAAGAGCCC",2,32.48,9.59,-1.24,0.22,2.41,1.24,0.01,"1 nonsynonymous","Y121T",1
"lib2","SARS-CoV-2","AAGGTACTCGAATTGT",3,26.7,9.69,-1.15,0.09,2.4,1,0,"1 nonsynonymous","L95T",1
"lib2","SARS-CoV-2","AAGGTACTGGCCTAGC",1,9.2,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T55S R78A D90C G146L G155L",5
"lib2","SARS-CoV-2","AAGGTAGAGGGCATAT",7,25.27,10.02,-0.82,0.09,2.51,1,0.01,">1 nonsynonymous","N110L P133T V173A",3
"lib2","SARS-CoV-2","AAGGTAGCCAACCGAG",2,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P Y91K G152F G155V",4
"lib2","SARS-CoV-2","AAGGTAGCCTTCTCCG",7,111.76,10.89,0.06,0.04,2.93,1.06,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","AAGGTAGGCCTGCGAT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F99S W106I F126* G155E",4
"lib2","SARS-CoV-2","AAGGTAGTCGGATTAA",1,32.35,8.44,-2.39,0.17,2.32,1.06,0.01,">1 nonsynonymous","V32E T55A G146V",3
"lib2","SARS-CoV-2","AAGGTAGTCTAATTAT",2,13.16,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","F44L Y93P Y119C E141R C158G",5
"lib2","SARS-CoV-2","AAGGTATAGACGGTGT",1,7.8,6,-4.84,2,3,1.03,0,">1 nonsynonymous","N24I V71R",2
"lib2","SARS-CoV-2","AAGGTATCACTTAGAC",13,116.13,6,-4.84,0.61,1.5,1.16,0,">1 nonsynonymous","A33K F44K Y143R F160R",4
"lib2","SARS-CoV-2","AAGGTATCAGTTAGCT",18,78.6,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","T85G D98E S113R P133L V173S F185Q",6
"lib2","SARS-CoV-2","AAGGTATCCCATTGGG",15,145.9,8.01,-2.83,0.14,1.5,1.1,0.01,">1 nonsynonymous","R127E E141K",2
"lib2","SARS-CoV-2","AAGGTATTATATTATC",13,168.54,10.93,0.09,0.05,2.93,1.08,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","AAGGTATTGACGTCCG",8,106.85,6,-4.84,1.69,1.5,1.14,0.01,">1 nonsynonymous","G83V Y91C N120F",3
"lib2","SARS-CoV-2","AAGGTCAATAGACGCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I D137G Y143V V153K Q168F Y175F",6
"lib2","SARS-CoV-2","AAGGTCAATCGCTAAC",5,122.68,10.18,-0.66,0.03,2.58,1.06,0,">1 nonsynonymous","L122V R127A",2
"lib2","SARS-CoV-2","AAGGTCACGTAGCCCT",4,94.67,8.36,-2.48,0.18,2.1,1.15,0.01,">1 nonsynonymous","N118I Y143H",2
"lib2","SARS-CoV-2","AAGGTCATATCTGGCT",2,23.95,10.15,-0.69,0.05,2.86,1,0,">1 nonsynonymous","Y35H P54H C61T",3
"lib2","SARS-CoV-2","AAGGTCATATTTCCCA",1,124.3,10.88,0.05,0.04,2.91,1.1,0,">1 nonsynonymous","K48N Y178H",2
"lib2","SARS-CoV-2","AAGGTCATGGCAACGA",6,146.48,10.44,-0.4,0.05,2.91,1.09,0,">1 nonsynonymous","S19P K114A A190V",3
"lib2","SARS-CoV-2","AAGGTCCACTCACCCC",9,200.25,10.7,-0.13,0.05,2.93,1.08,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","AAGGTCCAGTAACTAA",7,267.18,10.22,-0.61,0.02,2.95,1.02,0,">1 nonsynonymous","V37R N118A",2
"lib2","SARS-CoV-2","AAGGTCGAAATAATCG",10,74.47,6.17,-4.67,0.24,2.46,1.13,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","AAGGTCGAGTATTAAT",11,57.63,8.06,-2.77,0.35,1.5,1.03,0.06,">1 nonsynonymous","T55V G86T N130L Q168F G174V",5
"lib2","SARS-CoV-2","AAGGTCGCTAATAACG",2,36.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A89R D137C",2
"lib2","SARS-CoV-2","AAGGTCGCTCAATTTC",3,0,NA,NA,NA,NA,NA,NA,"stop","D90T N151*",2
"lib2","SARS-CoV-2","AAGGTCTAAATAAATA",10,119.66,10.36,-0.48,0.05,2.89,1.05,0,"1 nonsynonymous","E135V",1
"lib2","SARS-CoV-2","AAGGTCTCGGACTATC",4,12.65,8.48,-2.35,0.4,1.5,1,0.05,">1 nonsynonymous","F8P R78Y V103I",3
"lib2","SARS-CoV-2","AAGGTCTTCACTATTG",8,5.87,NA,NA,NA,NA,NA,NA,"stop","S45N Y50* Q84P G155M",4
"lib2","SARS-CoV-2","AAGGTCTTCCGTGACG",8,50.39,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S108P P161F R179K",3
"lib2","SARS-CoV-2","AAGGTCTTGGCACAAT",2,6.02,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36L D90F G146P G174L V180L S200C",6
"lib2","SARS-CoV-2","AAGGTGAAATTTGAAA",2,45.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C102F L162W",2
"lib2","SARS-CoV-2","AAGGTGAACTTCCAGC",12,132.92,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50F D98V G146Q T170E",4
"lib2","SARS-CoV-2","AAGGTGACGGATGGGC",6,37.3,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L57P R124V",2
"lib2","SARS-CoV-2","AAGGTGACTCTGTTTA",3,77.02,8.27,-2.56,0.27,1.5,1.02,0.04,">1 nonsynonymous","N4A S43R P96I T100F V153F",5
"lib2","SARS-CoV-2","AAGGTGAGAGACACAA",16,1.63,NA,NA,NA,NA,NA,NA,"stop","K26* G152D",2
"lib2","SARS-CoV-2","AAGGTGAGCACACACC",1,11.18,10.86,0.02,0.07,2.91,1.07,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","AAGGTGAGCCCAGAAA",7,149.13,10.4,-0.44,0.03,2.92,1.04,0,">1 nonsynonymous","N58L P149K",2
"lib2","SARS-CoV-2","AAGGTGATTCGATAAA",4,11.7,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","N1L A14S Y39S L60R D90P S129Y L183Y",7
"lib2","SARS-CoV-2","AAGGTGCAGTTGTCAC",7,193.61,10,-0.83,0.06,2.48,1.07,0,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","AAGGTGCGGTATAGTG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib2","SARS-CoV-2","AAGGTGCTAAGCGGGC",3,14.48,10.66,-0.18,0.08,2.99,1,0,">1 nonsynonymous","A22N L60R T201G",3
"lib2","SARS-CoV-2","AAGGTGGCACCGAACT",1,53.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S45A E76C N107I L188K",4
"lib2","SARS-CoV-2","AAGGTGGGGTACAGAA",19,16.62,9.69,-1.15,0.29,1.62,1.02,0.08,">1 nonsynonymous","T3G P7A A81I P133F P161N P169L V173C",7
"lib2","SARS-CoV-2","AAGGTGTATGAGCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R V65R F99V",3
"lib2","SARS-CoV-2","AAGGTGTCACAGTCAG",1,14.25,6,-4.84,2,1.5,1.31,0.08,">1 nonsynonymous","L5V V71D V103L N120M L131N I138G",6
"lib2","SARS-CoV-2","AAGGTGTCTGTTAATC",2,30.19,10.41,-0.42,0.06,2.98,1,0,">1 nonsynonymous","E10I Q84K N110L L122M F160N",5
"lib2","SARS-CoV-2","AAGGTGTTGTGGATGG",3,31.35,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A22P N40Y C61M V77L P82N G155N",6
"lib2","SARS-CoV-2","AAGGTTAACAGCCAAT",9,253.47,10.18,-0.66,0.02,2.99,1.01,0,">1 nonsynonymous","K87S S139N",2
"lib2","SARS-CoV-2","AAGGTTAAGACAACAT",3,97.21,10.48,-0.36,0.05,2.83,1.04,0,">1 nonsynonymous","K56S T63Y K132M",3
"lib2","SARS-CoV-2","AAGGTTAAGAGTTTTG",4,29.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93W R124D",2
"lib2","SARS-CoV-2","AAGGTTAATAGTGCAA",5,1.16,NA,NA,NA,NA,NA,NA,"stop","F17I L38M F99R I104* R127E G196W",6
"lib2","SARS-CoV-2","AAGGTTATATGAACAC",4,3.42,NA,NA,NA,NA,NA,NA,"stop","D112E Y119* Q176A",3
"lib2","SARS-CoV-2","AAGGTTATGCGAATAG",4,21.98,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S19T I80W Y91I S129I K199M",5
"lib2","SARS-CoV-2","AAGGTTATGGCATAAC",3,14.21,6.48,-4.35,0.91,1.5,1.12,0.01,">1 nonsynonymous","C6L T63S Y91R V103K F134D F156M V180S",7
"lib2","SARS-CoV-2","AAGGTTATGTTAGTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39* I80W N151V",3
"lib2","SARS-CoV-2","AAGGTTATTAGCGCGA",3,237.97,10.72,-0.12,0.04,2.84,1.03,0,">1 nonsynonymous","E10S F47A C150L G155P",4
"lib2","SARS-CoV-2","AAGGTTCAACTTGTAT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","K26* V37I L122G",3
"lib2","SARS-CoV-2","AAGGTTCAATGTAAAG",22,4.3,NA,NA,NA,NA,NA,NA,"stop","Y21K Y66* T100S P197A",4
"lib2","SARS-CoV-2","AAGGTTCCTAGCCTAT",3,79.85,NA,NA,NA,NA,NA,NA,"stop","L5V A81T D90Y D98N N120L I142F Y165T Y175* L183N",9
"lib2","SARS-CoV-2","AAGGTTGAACTCCTAA",5,26.52,7.74,-3.09,0.3,1.5,1.02,0.03,">1 nonsynonymous","S45Y D59Q G86K N130G P197T",5
"lib2","SARS-CoV-2","AAGGTTGCTCCAAAAC",3,6.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G F70H",2
"lib2","SARS-CoV-2","AAGGTTGGAAACGAAT",1,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87H F160W",2
"lib2","SARS-CoV-2","AAGGTTGGATCACGTA",8,43.26,6.6,-4.24,0.41,1.5,1.15,0.02,">1 nonsynonymous","K26L D34N L60M Y66I I80R D97L C102W N107F G152L",9
"lib2","SARS-CoV-2","AAGGTTTAGATGCTGC",8,231.7,10.64,-0.2,0.03,2.91,1.04,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","AAGGTTTCACAGTTAA",1,48.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G74W E141H Q168M Q176P",4
"lib2","SARS-CoV-2","AAGGTTTCGTACACTT",5,16.99,10.66,-0.17,0.08,3,1.04,0,">1 nonsynonymous","T55L D90S",2
"lib2","SARS-CoV-2","AAGGTTTGAAAAGAGT",1,5.99,6,-4.84,2,1.5,1.04,0.04,">1 nonsynonymous","Y50N F70R G86K Y123M G152H R179S",6
"lib2","SARS-CoV-2","AAGGTTTGCTCTAAAA",4,15.27,6.84,-3.99,0.47,1.5,1.1,0.02,">1 nonsynonymous","V77R P82Q",2
"lib2","SARS-CoV-2","AAGGTTTTGCTAATGC",2,17.47,6,-4.84,2,3,1.08,0,">1 nonsynonymous","P82K C102N",2
"lib2","SARS-CoV-2","AAGTAAAAAATATATG",2,30.64,9.27,-1.57,0.08,1.89,1.02,0,">1 nonsynonymous","I2L L131S",2
"lib2","SARS-CoV-2","AAGTAAAAAGTAACTA",4,43.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12Y Y39G A81K Y159R",4
"lib2","SARS-CoV-2","AAGTAAAAATTAATAT",5,20.52,6,-4.84,2,3,1.21,0,">1 nonsynonymous","L38R T100P L162S",3
"lib2","SARS-CoV-2","AAGTAAAACAAAACGG",5,67.25,10.34,-0.5,0.07,2.81,1.11,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","AAGTAAAACACTGGAC",1,73.32,10.18,-0.65,0.08,2.6,1.03,0,">1 nonsynonymous","P7L S139H",2
"lib2","SARS-CoV-2","AAGTAAAACGAAGTTT",6,69.34,10.82,-0.02,0.06,3,1.02,0,"1 nonsynonymous","V52I",1
"lib2","SARS-CoV-2","AAGTAAAACGCAGAGA",2,41.49,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","E10T K114V L122N N157L T170E",5
"lib2","SARS-CoV-2","AAGTAAAAGCATTACT",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85Q V103K L122F N171L",4
"lib2","SARS-CoV-2","AAGTAAAAGGAATCCC",2,11.07,9.68,-1.16,0.1,1.99,1,0.01,">1 nonsynonymous","C61M F99M G152S",3
"lib2","SARS-CoV-2","AAGTAAAAGTAAACCT",4,76.22,8.32,-2.52,0.16,2.57,1.06,0.01,"1 nonsynonymous","G146P",1
"lib2","SARS-CoV-2","AAGTAAAAGTAAAGAG",6,95.91,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G9A A14L Y39R I88T Q176D",5
"lib2","SARS-CoV-2","AAGTAAAATACCTACT",6,27.35,6.15,-4.69,0.96,1.5,1.13,0.02,">1 nonsynonymous","N118F D137E N157V",3
"lib2","SARS-CoV-2","AAGTAAAATCATCGCG",2,39.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G P133A N151S V173M",4
"lib2","SARS-CoV-2","AAGTAAACACACATGA",5,108.6,10.31,-0.52,0.07,2.75,1.03,0,">1 nonsynonymous","F47H P54L N110T",3
"lib2","SARS-CoV-2","AAGTAAACCAGGAGAA",12,82.29,7.85,-2.98,0.23,1.5,1.13,0.02,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","AAGTAAACCTAAAGTT",5,61.79,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F62H Y91H K94L F134I V180S",5
"lib2","SARS-CoV-2","AAGTAAACCTAGTTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib2","SARS-CoV-2","AAGTAAACGATAACAT",1,32.07,10.66,-0.17,0.04,2.91,1.07,0,">1 nonsynonymous","S41R D98S",2
"lib2","SARS-CoV-2","AAGTAAACGATTCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* Y39* F156R T201M",4
"lib2","SARS-CoV-2","AAGTAAACTCGCTAGG",3,0.93,NA,NA,NA,NA,NA,NA,"stop","Y35L V65* G83Y",3
"lib2","SARS-CoV-2","AAGTAAAGAATAATAA",4,205.8,10.15,-0.68,0.04,2.72,1.03,0,">1 nonsynonymous","L38W Y66L",2
"lib2","SARS-CoV-2","AAGTAAAGACCGCCAA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","P7E G152* Y178G",3
"lib2","SARS-CoV-2","AAGTAAAGATATCGTT",4,55.55,10.23,-0.61,0.07,2.64,1.01,0,">1 nonsynonymous","P133V Q163I",2
"lib2","SARS-CoV-2","AAGTAAAGATATTGCA",7,143.76,10.67,-0.16,0.02,2.94,1.03,0,"1 nonsynonymous","N171H",1
"lib2","SARS-CoV-2","AAGTAAAGATCTTTTT",1,15.76,9.58,-1.26,0.11,2.72,1.27,0.01,">1 nonsynonymous","R73S F160G",2
"lib2","SARS-CoV-2","AAGTAAAGCAAAGTTT",2,20.81,10.39,-0.45,0.07,2.92,1.12,0,">1 nonsynonymous","E10T F160G",2
"lib2","SARS-CoV-2","AAGTAAAGTATACCCG",4,13.09,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","A14V C61R F167Q",3
"lib2","SARS-CoV-2","AAGTAAAGTGCCGCAT",7,431.41,10.81,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTAAATACGCTGAC",16,208.04,9.99,-0.84,0.05,2.48,1.04,0,">1 nonsynonymous","S139Y T148N",2
"lib2","SARS-CoV-2","AAGTAAATCAAACGAT",3,4.7,NA,NA,NA,NA,NA,NA,"stop","K26R I88*",2
"lib2","SARS-CoV-2","AAGTAAATCACAATGG",5,48.31,9.24,-1.6,0.11,2.29,1.06,0.01,">1 nonsynonymous","G174M V181L",2
"lib2","SARS-CoV-2","AAGTAAATCTGCCTAT",10,116.81,10.85,0.02,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTAACACAATGTAT",3,61.2,9.45,-1.38,0.06,2.67,1.1,0,">1 nonsynonymous","E10V Q144V F160S",3
"lib2","SARS-CoV-2","AAGTAACAGAGCCTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V11L N24R D59* F160K",4
"lib2","SARS-CoV-2","AAGTAACCGGAGCCCT",2,15.81,6.33,-4.5,0.86,1.5,1.26,0.07,">1 nonsynonymous","C31H G83I I88V S147T",4
"lib2","SARS-CoV-2","AAGTAACCGGTAAATC",2,146.38,10.78,-0.06,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTAACGACCATTTT",7,75.23,9.73,-1.1,0.12,1.91,1.03,0.01,">1 nonsynonymous","N30E D90V",2
"lib2","SARS-CoV-2","AAGTAACGATAAGCAA",7,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V F70K N107S S184H",4
"lib2","SARS-CoV-2","AAGTAACGTAAAACGT",12,63.32,10.87,0.04,0.05,2.94,1.05,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","AAGTAACTAGAGTAGG",3,28.41,6,-4.84,2,3,1.11,0,">1 nonsynonymous","Y39F G51S D68N K114N G116A F126P",6
"lib2","SARS-CoV-2","AAGTAACTTCCCCCAG",8,144.91,10.75,-0.09,0.04,2.89,1.1,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AAGTAAGAACCAGTGA",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N T15I R27C D90G",4
"lib2","SARS-CoV-2","AAGTAAGAGCTGCACA",6,190.09,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L57P Y175E",2
"lib2","SARS-CoV-2","AAGTAAGATCTATGAT",9,39.77,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","P7G F99S L111V Y119L V181E",5
"lib2","SARS-CoV-2","AAGTAAGCCAAACATT",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L V20G K26A N64F F70R V77L Q163R R179L",8
"lib2","SARS-CoV-2","AAGTAAGGATACACAG",3,65.26,10.87,0.03,0.06,2.92,1.1,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","AAGTAAGGATGACACA",9,72.31,10.7,-0.14,0.06,2.94,1.07,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","AAGTAAGGGGACCCGG",8,1.6,NA,NA,NA,NA,NA,NA,"stop","S41* A89N P161F V180*",4
"lib2","SARS-CoV-2","AAGTAAGGGTAAGTAA",7,43.6,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L60T G86S S113V L162S",4
"lib2","SARS-CoV-2","AAGTAAGTGGACCTTT",6,70.03,6.13,-4.71,0.68,1.59,1.21,0.01,">1 nonsynonymous","N1P D90L N157W S200N",4
"lib2","SARS-CoV-2","AAGTAATAATATGGTC",6,4.1,NA,NA,NA,NA,NA,NA,"stop","I2M I88R G101* P149S Y165N",5
"lib2","SARS-CoV-2","AAGTAATAGGACCATG",6,1.77,NA,NA,NA,NA,NA,NA,"stop","T3G G9A G83N Y159* F167D",5
"lib2","SARS-CoV-2","AAGTAATAGGTTTCAT",5,2.75,NA,NA,NA,NA,NA,NA,"stop","N40S C61S D68* I88P F99T S113P G155F T201I",8
"lib2","SARS-CoV-2","AAGTAATATAGCAGTA",2,35.62,9.56,-1.27,0.09,2.71,1.08,0,">1 nonsynonymous","L60T C61Y D98A I138V G174P",5
"lib2","SARS-CoV-2","AAGTAATATATGCTGT",6,47.77,8.26,-2.57,0.09,1.87,1.09,0,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","AAGTAATATCCTACAC",7,0.48,NA,NA,NA,NA,NA,NA,"stop","L5* W23Q N64G Y91S",4
"lib2","SARS-CoV-2","AAGTAATCCGAATATC",9,3.23,NA,NA,NA,NA,NA,NA,"stop","V11* P54I N151F",3
"lib2","SARS-CoV-2","AAGTAATCGATACAAC",4,60.07,9.95,-0.88,0.08,1.9,1.05,0,">1 nonsynonymous","W106E Q168Y",2
"lib2","SARS-CoV-2","AAGTAATCTGCCAAAA",1,61.68,10.73,-0.1,0.03,2.93,1.08,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","AAGTAATGAAGGGAAG",4,106.21,10.33,-0.51,0.04,2.89,1.05,0,"1 nonsynonymous","S139V",1
"lib2","SARS-CoV-2","AAGTAATGAATGTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K26L C61* Y66L Y123F P149F",5
"lib2","SARS-CoV-2","AAGTAATGCAAGCCCA",6,37.3,9.06,-1.78,0.22,1.65,1.15,0.02,">1 nonsynonymous","T15I P96K",2
"lib2","SARS-CoV-2","AAGTAATGTTTGGGAA",1,22.39,8.26,-2.58,0.14,2.18,1.04,0.01,">1 nonsynonymous","D90Y K114T Y143I V173K",4
"lib2","SARS-CoV-2","AAGTAATTAAAAACAT",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N G116P G146I G174V",4
"lib2","SARS-CoV-2","AAGTAATTAACTTGAT",3,11.38,7.4,-3.43,0.38,1.5,1.02,0.04,">1 nonsynonymous","A14T A33M A42L F62Y N118D Y143V",6
"lib2","SARS-CoV-2","AAGTAATTATGAGACA",7,159.15,10.19,-0.65,0.03,2.81,1.09,0,">1 nonsynonymous","A14S F47L",2
"lib2","SARS-CoV-2","AAGTAATTGAACTCAA",1,39.51,10.06,-0.78,0.12,2.15,1,0.01,">1 nonsynonymous","N24A C102L",2
"lib2","SARS-CoV-2","AAGTAATTTACTTTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S147K C158W",2
"lib2","SARS-CoV-2","AAGTACAAAAAGCAAC",4,32.54,8.74,-2.09,0.12,2.96,1.04,0.01,"1 nonsynonymous","I142G",1
"lib2","SARS-CoV-2","AAGTACAAAAATGTAT",2,10.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23G F47N D97I W106L",4
"lib2","SARS-CoV-2","AAGTACAAAGACTGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39Q T63S I138* P169F",4
"lib2","SARS-CoV-2","AAGTACAAATGTAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* G83W S129I E135Y",4
"lib2","SARS-CoV-2","AAGTACAACCACCTCA",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152K",1
"lib2","SARS-CoV-2","AAGTACAACGTCACAC",1,12.25,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","K56A A89H V103A L183I",4
"lib2","SARS-CoV-2","AAGTACAAGCCAAATA",3,37.82,10.71,-0.13,0.06,2.89,1.12,0,">1 nonsynonymous","N4P S139N",2
"lib2","SARS-CoV-2","AAGTACAATGAATTAA",7,1.98,NA,NA,NA,NA,NA,NA,"stop","S108*",1
"lib2","SARS-CoV-2","AAGTACAATGACGAAC",12,174.29,9.75,-1.08,0.09,2.19,1.08,0,">1 nonsynonymous","A18L G116S",2
"lib2","SARS-CoV-2","AAGTACAATGCCGCGA",6,1.26,NA,NA,NA,NA,NA,NA,"stop","N58R K87* G146Q G155L V173C",5
"lib2","SARS-CoV-2","AAGTACAATGTCATAT",3,2.68,NA,NA,NA,NA,NA,NA,"stop","F70* Y119L S139G G174W",4
"lib2","SARS-CoV-2","AAGTACACAAACGATA",4,0.68,NA,NA,NA,NA,NA,NA,"stop","V37G G51V L122* F185N",4
"lib2","SARS-CoV-2","AAGTACACACCGAGCT",12,512.39,8.9,-1.94,0.06,2.29,1.1,0,">1 nonsynonymous","G83R I104L P177S",3
"lib2","SARS-CoV-2","AAGTACACAGGCTATA",1,10.21,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","D34P S113L",2
"lib2","SARS-CoV-2","AAGTACACCCAAAGCT",11,61.55,9.2,-1.63,0.1,1.74,1.15,0,"1 nonsynonymous","L131S",1
"lib2","SARS-CoV-2","AAGTACACCCGTTAAA",1,98.45,9.86,-0.97,0.05,2.7,1.06,0,">1 nonsynonymous","Q144L P191T",2
"lib2","SARS-CoV-2","AAGTACACTCACTGAG",7,56.37,10.4,-0.44,0.07,2.91,1.13,0,">1 nonsynonymous","S41A K48Q",2
"lib2","SARS-CoV-2","AAGTACACTGATCTTT",1,64.62,10.66,-0.18,0.07,2.92,1.02,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","AAGTACAGAAGATAAG",6,21.63,8.75,-2.08,0.44,1.5,1,0.06,">1 nonsynonymous","L5K L57T F99H V103A S129F N151Y",6
"lib2","SARS-CoV-2","AAGTACAGTTTACAAA",1,17.56,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D98G C150K N157I",3
"lib2","SARS-CoV-2","AAGTACATAAAGCAAA",1,7.86,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","T15V N64L I80T",3
"lib2","SARS-CoV-2","AAGTACATGTAACTGA",2,1.94,NA,NA,NA,NA,NA,NA,"stop","S53P T100* L125R K198T",4
"lib2","SARS-CoV-2","AAGTACCAATCCACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12W S36L G51M Y91L D112*",5
"lib2","SARS-CoV-2","AAGTACCCTCGTTATT",3,54.23,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T3W S19E V103C I138L",4
"lib2","SARS-CoV-2","AAGTACCCTTATTCCC",7,69.98,9.34,-1.49,0.06,2.87,1.15,0,">1 nonsynonymous","S53T Y119D",2
"lib2","SARS-CoV-2","AAGTACCTACGAGTTG",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118R K128A F156P",3
"lib2","SARS-CoV-2","AAGTACGAAATAGAAA",4,169.17,9.38,-1.45,0.09,2.6,1.06,0,">1 nonsynonymous","T15L V115C",2
"lib2","SARS-CoV-2","AAGTACGCTCGTGCCA",10,58.79,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D90L D98F N120S R136I G152F",5
"lib2","SARS-CoV-2","AAGTACGGCTAAAGTA",1,13.72,10.35,-0.48,0.06,3,1,0,">1 nonsynonymous","N1S F44V",2
"lib2","SARS-CoV-2","AAGTACGTCATTGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8L S43* R136T T201*",4
"lib2","SARS-CoV-2","AAGTACGTTTAAGTTA",4,24.38,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27Y A81P A89Y C150T T201S",5
"lib2","SARS-CoV-2","AAGTACTACCCACATG",1,9.09,10.4,-0.43,0.1,3,1,0,"1 nonsynonymous","Y91I",1
"lib2","SARS-CoV-2","AAGTACTACTAGCAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","Y39* L111S",2
"lib2","SARS-CoV-2","AAGTACTAGCACAGAA",1,18.61,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","V20W C61F A89L L95P",4
"lib2","SARS-CoV-2","AAGTACTCCTATGGGA",10,4.22,NA,NA,NA,NA,NA,NA,"stop","F44* D59A",2
"lib2","SARS-CoV-2","AAGTACTCGTTTGACA",6,21.16,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V77Q A81Y Y91K K114T",4
"lib2","SARS-CoV-2","AAGTACTGTTGAATTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N13* N58D F160C P169L",4
"lib2","SARS-CoV-2","AAGTACTTATCAGATG",2,12.42,6,-4.84,2,1.99,1.06,0.01,">1 nonsynonymous","C49S N120P",2
"lib2","SARS-CoV-2","AAGTACTTATTATATA",7,71.54,6.96,-3.87,0.32,1.5,1.15,0.02,"1 nonsynonymous","R179S",1
"lib2","SARS-CoV-2","AAGTACTTTATGCCAA",1,40.48,10.81,-0.03,0.05,3,1.03,0,">1 nonsynonymous","T3S E141Q",2
"lib2","SARS-CoV-2","AAGTAGAAAATTTGAA",2,38.6,6.75,-4.09,0.31,1.5,1.17,0.02,">1 nonsynonymous","R127Y A190R",2
"lib2","SARS-CoV-2","AAGTAGAAAGGGTTGT",4,12.59,6,-4.84,2,3,1.13,0,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","AAGTAGAAGTTATACA",1,20.32,10.72,-0.11,0.06,2.92,1.08,0,"1 nonsynonymous","T3D",1
"lib2","SARS-CoV-2","AAGTAGAATCCCAATA",4,32.66,10,-0.83,0.12,2.35,1,0,">1 nonsynonymous","A14V S43W P54S",3
"lib2","SARS-CoV-2","AAGTAGAATCTTTTCG",5,80,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L122W S139H C150S",3
"lib2","SARS-CoV-2","AAGTAGACTATGGTAT",1,6.25,10.71,-0.12,0.12,2.56,1.46,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","AAGTAGAGATTACTCA",10,34.09,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F70L G116V G196L",3
"lib2","SARS-CoV-2","AAGTAGAGGGAGTCCT",4,45.04,9.37,-1.46,0.1,1.93,1.07,0,">1 nonsynonymous","Y121T E186N P191R",3
"lib2","SARS-CoV-2","AAGTAGATATCACAAC",5,102.56,9.76,-1.08,0.06,2.42,1.05,0,">1 nonsynonymous","C6A L60N",2
"lib2","SARS-CoV-2","AAGTAGATATCCCAGT",5,59.93,8.72,-2.11,0.15,1.65,1.1,0.01,">1 nonsynonymous","Y35R G146R",2
"lib2","SARS-CoV-2","AAGTAGATGACTCAAT",5,14.86,6.06,-4.78,1.4,1.5,1.2,0.04,">1 nonsynonymous","S41N T55Y K87C V103P",4
"lib2","SARS-CoV-2","AAGTAGATTGCTCAAA",1,15.83,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G83N D97R A105P Y175N",4
"lib2","SARS-CoV-2","AAGTAGATTGGAGGGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A D97Y I138L",3
"lib2","SARS-CoV-2","AAGTAGCCCACAGTAA",1,12.43,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","N30Q D68K F99M E141Q",4
"lib2","SARS-CoV-2","AAGTAGCCTAAATGGG",9,168.7,10.36,-0.48,0.04,2.95,1.05,0,">1 nonsynonymous","P149Q G174Q",2
"lib2","SARS-CoV-2","AAGTAGCGGATTCAAA",2,7.07,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","F44H Y93R T100L",3
"lib2","SARS-CoV-2","AAGTAGGAAGTACGAG",5,35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1C E10G N118P R127V",4
"lib2","SARS-CoV-2","AAGTAGGATAATCGTA",2,32.52,8.41,-2.43,0.12,3,1.02,0,"1 nonsynonymous","N171D",1
"lib2","SARS-CoV-2","AAGTAGGCTAGTTGAC",3,60.39,9.5,-1.34,0.11,2.23,1.11,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","AAGTAGGTGCGCAAAG",2,18.37,10.27,-0.57,0.11,2.94,1.1,0,">1 nonsynonymous","K48S G174A",2
"lib2","SARS-CoV-2","AAGTAGTAGAATCGCA",7,0.96,NA,NA,NA,NA,NA,NA,"stop","A67T T100P W106L Y159*",4
"lib2","SARS-CoV-2","AAGTAGTATGGACAGA",4,10.47,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","Y91W S129M L162M F185T",4
"lib2","SARS-CoV-2","AAGTAGTATTAAAAGG",2,2.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N30C",1
"lib2","SARS-CoV-2","AAGTAGTCCCATGCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","I72M T100* A190D",3
"lib2","SARS-CoV-2","AAGTAGTGAGTAGAAC",1,8.35,6,-4.84,2,3,1.05,0,">1 nonsynonymous","W23Q A42L D59Q V77M L95S P149C P197R",7
"lib2","SARS-CoV-2","AAGTAGTTCCCACGAT",3,72.28,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R25S Y39H Y123R Q176F",4
"lib2","SARS-CoV-2","AAGTAGTTTGTTATCT",2,0.95,NA,NA,NA,NA,NA,NA,"stop","Y39S C61L R73* K198N",4
"lib2","SARS-CoV-2","AAGTATAAAAAACCCA",3,12.28,10.07,-0.76,0.21,2.3,1.27,0.01,">1 nonsynonymous","A33N C61Y N107S",3
"lib2","SARS-CoV-2","AAGTATAAAAAAGTAA",4,24.44,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","F99P L122M Y143R S184K",4
"lib2","SARS-CoV-2","AAGTATAAAGCTCATA",1,14.89,6,-4.84,1.06,3,1.14,0.02,">1 nonsynonymous","N4T I104K G146I T170Y",4
"lib2","SARS-CoV-2","AAGTATAACTGTAACA",1,32.1,10.89,0.06,0.06,3,1.02,0,">1 nonsynonymous","V37F T55P Y66M P197V",4
"lib2","SARS-CoV-2","AAGTATAAGAAACTGG",3,62.52,9.95,-0.89,0.11,2.36,1.09,0,">1 nonsynonymous","S43H K48G T148L",3
"lib2","SARS-CoV-2","AAGTATAAGCCAAGAA",4,31.37,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","I88W I142S",2
"lib2","SARS-CoV-2","AAGTATAAGTGGAGAA",7,113.92,10.77,-0.07,0.06,2.84,1.16,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","AAGTATACAAAAATAA",1,100.83,8.49,-2.35,0.08,2.42,1.11,0,">1 nonsynonymous","Y121I K128N G146T",3
"lib2","SARS-CoV-2","AAGTATACACAATTGT",2,36.94,9.17,-1.67,0.11,1.89,1.13,0.01,"1 nonsynonymous","F12N",1
"lib2","SARS-CoV-2","AAGTATACGCCCCCTA",7,136.31,8.65,-2.18,0.11,2,1.05,0,">1 nonsynonymous","N118W F134L K199V",3
"lib2","SARS-CoV-2","AAGTATACGGCCACAC",1,30.54,10.55,-0.28,0.07,2.88,1.02,0,">1 nonsynonymous","N58I Y121Q N171M",3
"lib2","SARS-CoV-2","AAGTATACGTACGAAG",1,30.84,10.87,0.03,0.06,2.95,1.05,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","AAGTATACTAAATCGT",2,96.3,10.04,-0.8,0.05,2.7,1.01,0,">1 nonsynonymous","S45E T63L D90F",3
"lib2","SARS-CoV-2","AAGTATAGAGTGAAGC",2,7.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8K R25T C61Q Y91S P149Y",5
"lib2","SARS-CoV-2","AAGTATAGGGGCTGCC",2,6.49,8.35,-2.48,0.53,1.5,1.19,0.07,">1 nonsynonymous","I2M A105Y S164R V181M",4
"lib2","SARS-CoV-2","AAGTATAGTCAGTAAA",5,7.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1K E10H P82L",3
"lib2","SARS-CoV-2","AAGTATAGTGGTTTAA",18,167.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2T F47V D68P Y91L F99N D112R V173T Y178S",8
"lib2","SARS-CoV-2","AAGTATATATGCACGG",12,115.41,10.78,-0.05,0.03,2.92,1.1,0,"1 nonsynonymous","A192R",1
"lib2","SARS-CoV-2","AAGTATATCCAGAAAC",1,35.8,10.34,-0.5,0.22,2.23,1.11,0.02,">1 nonsynonymous","K56Q T63S G155Y N171W",4
"lib2","SARS-CoV-2","AAGTATATTATGCATA",10,73.2,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A33E S69G A89K E154C",4
"lib2","SARS-CoV-2","AAGTATCAAACCTGCC",8,176.48,9.97,-0.86,0.06,2.57,1.04,0,">1 nonsynonymous","Y35A N40K N64F L95I",4
"lib2","SARS-CoV-2","AAGTATCAAATACGAT",2,65.93,10.6,-0.24,0.05,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTATCAAGAGACGT",1,2,NA,NA,NA,NA,NA,NA,"stop","L5S D59R L125* C150L Q176*",5
"lib2","SARS-CoV-2","AAGTATCACACCAAGC",1,25.87,9.91,-0.93,0.12,2.2,1.04,0.01,">1 nonsynonymous","F8I S139Y",2
"lib2","SARS-CoV-2","AAGTATCACACGGACC",3,0,NA,NA,NA,NA,NA,NA,"stop","F17* G51Q A81*",3
"lib2","SARS-CoV-2","AAGTATCACTACGTCC",5,65.96,10.75,-0.09,0.05,2.91,1.1,0,">1 nonsynonymous","D90N A190V",2
"lib2","SARS-CoV-2","AAGTATCAGAATAATG",3,50.35,6.09,-4.74,1.2,1.5,1.27,0.04,">1 nonsynonymous","D59V A81Q K87S Q168L",4
"lib2","SARS-CoV-2","AAGTATCATTTGATGC",1,81.03,8.43,-2.4,0.14,2.87,1.09,0.01,">1 nonsynonymous","T55A Y175M",2
"lib2","SARS-CoV-2","AAGTATCCAGTACACA",1,10.29,8.75,-2.09,0.2,2.29,1.17,0.01,"1 nonsynonymous","R73D",1
"lib2","SARS-CoV-2","AAGTATCCCAACCCAT",10,101.26,10.64,-0.2,0.04,3,1.02,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","AAGTATCCCACTGCAC",11,198.07,10.78,-0.05,0.04,2.87,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGTATCCCGACCAGC",3,122.03,10.76,-0.07,0.06,2.92,1.1,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AAGTATCCTAAAGGTT",7,150.79,10.24,-0.59,0.03,2.87,1.05,0,">1 nonsynonymous","N4K A42R K48C N120Y",4
"lib2","SARS-CoV-2","AAGTATCGATCCCGCT",21,321.21,10.28,-0.56,0.03,2.89,1.07,0,">1 nonsynonymous","T55L G83F F156Y",3
"lib2","SARS-CoV-2","AAGTATCGATGACAAC",13,283.64,10.75,-0.08,0.02,2.94,1.06,0,"1 nonsynonymous","D59A",1
"lib2","SARS-CoV-2","AAGTATCTAGATAAGG",1,53.73,10.83,-0.01,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTATCTAGCCGTGC",14,25.13,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","A14E A42C C49P S53N T201P",5
"lib2","SARS-CoV-2","AAGTATCTGCCGGGAA",1,29.43,6.34,-4.5,0.79,1.5,1.05,0.06,">1 nonsynonymous","K56V D68C K132G",3
"lib2","SARS-CoV-2","AAGTATGAAGCCACAT",1,37.83,10.8,-0.03,0.07,2.97,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTATGACCTCGAAA",5,237.38,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","L38R F70K P133L E141V",4
"lib2","SARS-CoV-2","AAGTATGACTAAGAAA",1,42.21,10.68,-0.15,0.1,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTATGCGCACTTCA",10,17.44,6.1,-4.74,1.06,1.5,1.2,0.03,">1 nonsynonymous","A33N V103L",2
"lib2","SARS-CoV-2","AAGTATGGAAAAATCC",6,33.91,7.6,-3.23,0.28,1.5,1.18,0.03,">1 nonsynonymous","I104A S139A V181M",3
"lib2","SARS-CoV-2","AAGTATGGAAAAGAAT",10,4.58,NA,NA,NA,NA,NA,NA,"stop","T46* F62V D90F P96K L122E Q176P",6
"lib2","SARS-CoV-2","AAGTATGTGTTCTAGT",1,32.04,10.62,-0.22,0.04,3,1.03,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AAGTATTAAACGTAAA",2,30.45,8,-2.83,0.25,1.5,1.1,0.02,">1 nonsynonymous","N4K A14S S36P Y121N",4
"lib2","SARS-CoV-2","AAGTATTAACAATCCA",1,10.17,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S53F S147L F167Q",3
"lib2","SARS-CoV-2","AAGTATTCAAATATCG",3,40.16,10.64,-0.2,0.03,2.99,1.01,0,">1 nonsynonymous","V37T S41R",2
"lib2","SARS-CoV-2","AAGTATTCAACAGGAT",5,89.79,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L5T C158F",2
"lib2","SARS-CoV-2","AAGTATTCGAGACTGT",8,37.17,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G51V W106G",2
"lib2","SARS-CoV-2","AAGTATTGACGAATAT",3,88.62,10.59,-0.24,0.05,2.88,1.1,0,">1 nonsynonymous","T63I V173F",2
"lib2","SARS-CoV-2","AAGTATTGGGATACAT",6,63.09,10.74,-0.09,0.06,2.83,1.17,0,">1 nonsynonymous","K56N Y66F Q163H",3
"lib2","SARS-CoV-2","AAGTATTTAATGGCAT",15,327.39,10.41,-0.43,0.03,2.95,1.04,0,">1 nonsynonymous","I2C G9F R16L V32I C61H S200H",6
"lib2","SARS-CoV-2","AAGTATTTCCTTCACC",4,35.19,6.93,-3.9,0.31,1.5,1.21,0.03,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","AAGTATTTCTTTTAGC",4,35.9,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F17S L38S D97Y V173F",4
"lib2","SARS-CoV-2","AAGTCAAAACAACACT",1,17.01,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G9V A14Q S45M I88R A105K S129R R136A",7
"lib2","SARS-CoV-2","AAGTCAAAAGCATTTA",7,52.59,9.85,-0.99,0.09,2.1,1.05,0,">1 nonsynonymous","G51Y N171S",2
"lib2","SARS-CoV-2","AAGTCAAAATATACAA",3,24.35,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S43K N107G L122P P197H",4
"lib2","SARS-CoV-2","AAGTCAAACCCACAAG",14,227.72,10.87,0.04,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCAAAGTTTACAG",10,39.84,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D98C F167I",2
"lib2","SARS-CoV-2","AAGTCAACAAAACGGA",3,85.86,10.89,0.05,0.05,2.97,1.03,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","AAGTCAACCAAGCTTG",2,28.41,9.59,-1.25,0.07,2.35,1.12,0,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","AAGTCAACCATAGCGT",2,57.06,10.46,-0.37,0.07,2.88,1.06,0,">1 nonsynonymous","N64L A190P",2
"lib2","SARS-CoV-2","AAGTCAACGACCACCC",1,10.83,9.34,-1.49,0.15,2.09,1.06,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","AAGTCAACTATATCGC",10,258.98,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","G83A D98K P177M",3
"lib2","SARS-CoV-2","AAGTCAAGATAAGACT",6,71.04,10.93,0.1,0.05,2.99,1.03,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","AAGTCAAGCCGTTATA",3,10.04,10.77,-0.06,0.16,2.73,1.2,0.01,">1 nonsynonymous","R16H V115A T201N",3
"lib2","SARS-CoV-2","AAGTCAATTTAGGGAT",2,5.76,6.74,-4.1,0.72,1.85,1.1,0.02,">1 nonsynonymous","G86S Y93W F99L G116Q",4
"lib2","SARS-CoV-2","AAGTCACAAGTAACAG",1,17.87,7.89,-2.94,0.23,1.58,1.04,0.03,">1 nonsynonymous","C61N V77C G117V",3
"lib2","SARS-CoV-2","AAGTCACACTATCCAT",5,1.99,NA,NA,NA,NA,NA,NA,"stop","K94S N130M G172*",3
"lib2","SARS-CoV-2","AAGTCACATGTCCGAT",3,9.58,6,-4.84,2,1.5,1.02,0.01,">1 nonsynonymous","N1Y N58D F99C",3
"lib2","SARS-CoV-2","AAGTCACCTGGCTAGA",5,54.33,7.63,-3.21,0.22,1.5,1.02,0.01,">1 nonsynonymous","T100H S129Y Q176T",3
"lib2","SARS-CoV-2","AAGTCACTAAAGAACG",6,26.74,6,-4.84,1.1,1.5,1.1,0.01,">1 nonsynonymous","P96Q D112M G166V L188V A192T",5
"lib2","SARS-CoV-2","AAGTCACTCCGCCAAC",10,149.72,10.8,-0.03,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCACTCGTACCAT",2,14.22,10.25,-0.58,0.2,2.01,1.2,0.02,">1 nonsynonymous","V52E D97P",2
"lib2","SARS-CoV-2","AAGTCACTTCGGTTAT",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I S139F L183N",3
"lib2","SARS-CoV-2","AAGTCAGAACCTAACA",1,19.77,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","K56I G101D",2
"lib2","SARS-CoV-2","AAGTCAGAGATTGTCA",1,34.98,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N92K R127I",2
"lib2","SARS-CoV-2","AAGTCAGATAACCCCA",3,83.43,10.58,-0.25,0.05,2.93,1.1,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","AAGTCAGATAACGAGT",5,6.79,NA,NA,NA,NA,NA,NA,"stop","C61* V103K Y119T A145D",4
"lib2","SARS-CoV-2","AAGTCAGCAATAATGC",7,57.19,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F44Y F99I D112L C150S",4
"lib2","SARS-CoV-2","AAGTCAGGATCTGACG",4,9.2,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","C61M C102R S139F",3
"lib2","SARS-CoV-2","AAGTCATAACAATAGT",7,80.72,6.51,-4.32,0.44,1.5,1.17,0.02,">1 nonsynonymous","L5Q D97S A105S D112V L122E",5
"lib2","SARS-CoV-2","AAGTCATAACACTGGA",9,110.87,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38D L95Q",2
"lib2","SARS-CoV-2","AAGTCATAACGTTTTC",6,131.43,6.91,-3.92,0.12,1.5,1.12,0,">1 nonsynonymous","F17G G86S",2
"lib2","SARS-CoV-2","AAGTCATGGCAAGACC",2,11.15,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","C6R F99R",2
"lib2","SARS-CoV-2","AAGTCATTACCCCGCA",5,88.59,9.6,-1.24,0.07,2.17,1.04,0,">1 nonsynonymous","Y35L T85V P133L T201W",4
"lib2","SARS-CoV-2","AAGTCATTCTTCAACG",5,88.31,9.27,-1.56,0.07,2.43,1.09,0,">1 nonsynonymous","A67S T170S",2
"lib2","SARS-CoV-2","AAGTCATTGCCCTGAT",5,1.71,NA,NA,NA,NA,NA,NA,"stop","R25*",1
"lib2","SARS-CoV-2","AAGTCATTTTATGCGT",10,4.62,NA,NA,NA,NA,NA,NA,"stop","A14V F99* E141A F156*",4
"lib2","SARS-CoV-2","AAGTCCAAAAAGAAAA",8,84.72,9.03,-1.8,0.15,1.5,1.1,0.01,">1 nonsynonymous","E10C A81H",2
"lib2","SARS-CoV-2","AAGTCCAAATCTTTGG",1,14.49,6,-4.84,2,1.5,1.33,0.07,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","AAGTCCAATCAATATC",9,95.23,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N13R Y35R Y123L S129D R136I C158A K199N",7
"lib2","SARS-CoV-2","AAGTCCAATGCCGTTT",6,86.76,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","E10H R27S Y35H L95Y",4
"lib2","SARS-CoV-2","AAGTCCAATTAAATAC",1,5.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D P82T R136D",3
"lib2","SARS-CoV-2","AAGTCCACGCACTACA",2,16.85,9.16,-1.68,0.3,1.5,1.05,0.04,">1 nonsynonymous","K26L N58K Y143C",3
"lib2","SARS-CoV-2","AAGTCCAGCATGCTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T15D N24S A33K T85W I104* K114C V173I",7
"lib2","SARS-CoV-2","AAGTCCAGTATCGGGT",2,30.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L131W Y178V T201L",3
"lib2","SARS-CoV-2","AAGTCCATATCAAGGA",1,11.25,6.4,-4.43,1.12,1.5,1.31,0.06,">1 nonsynonymous","T15S D34R G74F",3
"lib2","SARS-CoV-2","AAGTCCATTAGCATGT",16,113.97,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y39S P96F D112F C158W",4
"lib2","SARS-CoV-2","AAGTCCCAAAAAACTT",5,22.52,9.48,-1.36,0.23,1.5,1,0.04,">1 nonsynonymous","S164H L183T",2
"lib2","SARS-CoV-2","AAGTCCCATTCTCCAT",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V L122S I142T",3
"lib2","SARS-CoV-2","AAGTCCCCATCATGCA",5,69.62,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P7K Y119P K128F C150S V181A",5
"lib2","SARS-CoV-2","AAGTCCCGTATGGTCC",9,89.88,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D90T S164L T170V",3
"lib2","SARS-CoV-2","AAGTCCCTATGACGCA",1,2.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","AAGTCCGAACACAAAA",2,33.29,10.66,-0.18,0.04,2.77,1.23,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","AAGTCCGACCTAGACT",2,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R L60D S184I",3
"lib2","SARS-CoV-2","AAGTCCGACGGAGGAT",8,192.13,9.72,-1.12,0.03,2.9,1.11,0,"1 nonsynonymous","T170R",1
"lib2","SARS-CoV-2","AAGTCCGCTGTCCGCA",9,85.39,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C61S A67I Y91L Y165S",4
"lib2","SARS-CoV-2","AAGTCCGGACATTCCA",5,291.47,10.59,-0.25,0.04,2.93,1.07,0,"1 nonsynonymous","G116D",1
"lib2","SARS-CoV-2","AAGTCCGGTTACGTAC",2,8.39,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","I2T V77T C150A S200G",4
"lib2","SARS-CoV-2","AAGTCCTAGTTCGCGA",7,69.53,9.69,-1.14,0.08,2.82,1.05,0,">1 nonsynonymous","S45N E154W",2
"lib2","SARS-CoV-2","AAGTCCTGAGTGCTGT",10,218.55,10.25,-0.59,0.01,2.99,1.03,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","AAGTCCTGATTTAACC",1,25.52,10.24,-0.59,0.1,2.66,1.08,0,">1 nonsynonymous","R136W T201M",2
"lib2","SARS-CoV-2","AAGTCCTGTAATAAGC",4,41.32,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V20R V103C A145K",3
"lib2","SARS-CoV-2","AAGTCGAACAAAAGCA",1,14.73,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S36Q N92E",2
"lib2","SARS-CoV-2","AAGTCGAAGCTATGGA",6,77.28,9.66,-1.17,0.07,2.73,1.08,0,">1 nonsynonymous","L5H V32M G155L",3
"lib2","SARS-CoV-2","AAGTCGAAGTTTGTCT",7,33.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S43T G152V Q176T",3
"lib2","SARS-CoV-2","AAGTCGACGTTCAGAT",1,19.18,10.82,-0.02,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCGAGGTTACCTA",1,47.54,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25E G152S G174K",3
"lib2","SARS-CoV-2","AAGTCGATAAGGACCG",2,0.81,NA,NA,NA,NA,NA,NA,"stop","R73*",1
"lib2","SARS-CoV-2","AAGTCGATAGTACTCC",14,109.29,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y50R N107M F160I",3
"lib2","SARS-CoV-2","AAGTCGATATTCACGC",1,14.43,NA,NA,NA,NA,NA,NA,"stop","I72F I104R T201*",3
"lib2","SARS-CoV-2","AAGTCGATTGAGGTAA",7,40.6,10.72,-0.12,0.08,2.95,1.07,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","AAGTCGATTGCGAATC",4,32.05,6,-4.84,2,1.5,1.38,0.04,">1 nonsynonymous","G9L T63H G86N D90I",4
"lib2","SARS-CoV-2","AAGTCGCAGATGCCTT",11,126.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V32P R127I F156P",3
"lib2","SARS-CoV-2","AAGTCGCGTGCGCGAA",11,0.23,NA,NA,NA,NA,NA,NA,"stop","L5Y T15N D68R K128S T140L T170*",6
"lib2","SARS-CoV-2","AAGTCGCGTTATAACG",11,30.95,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S36W Y50P Y93L",3
"lib2","SARS-CoV-2","AAGTCGCTATTTAACT",5,101.9,8.97,-1.87,0.08,2.45,1.05,0,">1 nonsynonymous","V52T G146R P149T",3
"lib2","SARS-CoV-2","AAGTCGCTGCCCCCAA",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R P82S D90H G152Y",4
"lib2","SARS-CoV-2","AAGTCGGAAATTAATG",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84T F99P N157S Y178D",4
"lib2","SARS-CoV-2","AAGTCGGACGTCTTTT",5,25.04,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S36Y N64K Y91D G117Q",4
"lib2","SARS-CoV-2","AAGTCGGATCTATTTA",4,38.87,6,-4.84,1.8,3,1.21,0.01,">1 nonsynonymous","R27H V37A Y50P",3
"lib2","SARS-CoV-2","AAGTCGGATTTACATA",7,49.38,10.79,-0.04,0.06,2.88,1.12,0,">1 nonsynonymous","L60Y N120M",2
"lib2","SARS-CoV-2","AAGTCGTAGCTACATA",2,15.32,10.06,-0.77,0.09,2.64,1.25,0,">1 nonsynonymous","V153E F185V",2
"lib2","SARS-CoV-2","AAGTCGTCGAATACCC",9,107.76,10.81,-0.02,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCGTTATTCTATA",4,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W G116A C158G",3
"lib2","SARS-CoV-2","AAGTCTAATATTTCGG",11,34.96,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K56T K87H P96L D112L N157Y",5
"lib2","SARS-CoV-2","AAGTCTAATTCTCGAA",12,120.64,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N64M Y93S N157M",3
"lib2","SARS-CoV-2","AAGTCTACCTTGCGGC",9,144.91,8.12,-2.72,0.14,2.11,1.08,0.01,">1 nonsynonymous","Y91L N120R T148D Y175S T201L",5
"lib2","SARS-CoV-2","AAGTCTACTAAAGTAA",12,63.15,8.57,-2.27,0.14,1.5,1.09,0.01,">1 nonsynonymous","D90N C102W",2
"lib2","SARS-CoV-2","AAGTCTACTAACACGC",1,36.56,10.76,-0.08,0.07,2.87,1.13,0,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","AAGTCTAGACGAAACT",8,85.94,9.82,-1.01,0.09,2.13,1.02,0,">1 nonsynonymous","N4L T15V N64I",3
"lib2","SARS-CoV-2","AAGTCTAGGATTAAGT",1,1.59,NA,NA,NA,NA,NA,NA,"stop","G101R N107S G166*",3
"lib2","SARS-CoV-2","AAGTCTAGTCTAAACA",2,68.49,10.19,-0.64,0.05,2.86,1.04,0,">1 nonsynonymous","C6I N24T",2
"lib2","SARS-CoV-2","AAGTCTAGTTAATCGA",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I S19R T55G P96D F99I L122A C158A",7
"lib2","SARS-CoV-2","AAGTCTATAACTAGTA",2,11.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88Q G146W",2
"lib2","SARS-CoV-2","AAGTCTATAACTGATA",1,36.3,10.89,0.06,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCTATGAGAATTT",3,71.41,10.48,-0.36,0.06,2.9,1.08,0,">1 nonsynonymous","R16E R136S",2
"lib2","SARS-CoV-2","AAGTCTATTCAGAACT",3,14.74,9.72,-1.12,0.22,1.69,1.1,0.02,"1 nonsynonymous","V182S",1
"lib2","SARS-CoV-2","AAGTCTCATACCCCTT",21,212.14,9.04,-1.79,0.04,1.83,1.06,0,">1 nonsynonymous","A33L Y121W P149H",3
"lib2","SARS-CoV-2","AAGTCTCATGAGCCCT",5,30.37,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","G83Y D90P D97K V115G E154N G196E",6
"lib2","SARS-CoV-2","AAGTCTCCTTTAATAT",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91W N118K G146K G174K L183V",5
"lib2","SARS-CoV-2","AAGTCTCGATATGCTT",2,43.83,9.79,-1.05,0.1,2.6,1.09,0.01,">1 nonsynonymous","Q84H I104M H189Y",3
"lib2","SARS-CoV-2","AAGTCTCTTCCAAATA",4,43.81,9.79,-1.05,0.08,2.21,1.03,0,">1 nonsynonymous","N92S A105S",2
"lib2","SARS-CoV-2","AAGTCTGAATACAAAT",4,66.76,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","C49R N107T C150A F167S",4
"lib2","SARS-CoV-2","AAGTCTGATGAAATAC",14,194.59,8.63,-2.2,0.07,2.75,1.09,0,">1 nonsynonymous","L5C S41K F156C",3
"lib2","SARS-CoV-2","AAGTCTGATTGCAAAA",9,50.72,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2A D90V L95P N107V",4
"lib2","SARS-CoV-2","AAGTCTGCCAATTAAA",8,56.23,10.89,0.05,0.05,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTCTGCTCGATCTG",6,4.28,NA,NA,NA,NA,NA,NA,"stop","L5T A33P N58R A81N L131S F167* S184G",7
"lib2","SARS-CoV-2","AAGTCTGGTTAGAAAG",1,16.21,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C6K W23S N151M",3
"lib2","SARS-CoV-2","AAGTCTTATAAATCAT",2,41.38,10.16,-0.67,0.06,2.6,1.06,0,">1 nonsynonymous","N24R Y35S V52T",3
"lib2","SARS-CoV-2","AAGTCTTCGCCAACCA",6,119.17,9.44,-1.4,0.08,1.9,1.07,0,">1 nonsynonymous","D98L N107G",2
"lib2","SARS-CoV-2","AAGTCTTGCTAAACCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M L122W",2
"lib2","SARS-CoV-2","AAGTCTTGGTGCTATG",4,16.9,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","L60S F167A S184L",3
"lib2","SARS-CoV-2","AAGTGAAAAACGTTTG",1,40.01,10.52,-0.32,0.04,2.93,1.09,0,">1 nonsynonymous","A105S I138A",2
"lib2","SARS-CoV-2","AAGTGAAAGAACTCCA",5,56.02,9.77,-1.06,0.06,1.9,1.1,0,">1 nonsynonymous","E10V N40L D90R T148K",4
"lib2","SARS-CoV-2","AAGTGAAATGCCCTCG",11,3.6,NA,NA,NA,NA,NA,NA,"stop","R16G S53L Y178*",3
"lib2","SARS-CoV-2","AAGTGAACAAATTCCA",1,23.57,8.75,-2.09,0.24,2.17,1.09,0.02,">1 nonsynonymous","A67T S147N Q168I",3
"lib2","SARS-CoV-2","AAGTGAACCAATAATA",1,69.42,8.84,-2,0.08,2.25,1.07,0,">1 nonsynonymous","A14G V115I Y175H V181I",4
"lib2","SARS-CoV-2","AAGTGAAGCTTAAAAC",4,35.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9L V71N Y93S Y143M",4
"lib2","SARS-CoV-2","AAGTGAAGGGTGAGTA",1,33.04,8.42,-2.42,0.2,1.5,1.07,0.02,">1 nonsynonymous","S43L R73F",2
"lib2","SARS-CoV-2","AAGTGAAGTAAGTGAG",5,19.67,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","C6V N40C G83N A89I I138S",5
"lib2","SARS-CoV-2","AAGTGAATATCACCAA",4,24.44,6.72,-4.11,0.73,1.5,1.28,0.06,">1 nonsynonymous","N30T I104K R136C C158K T170Q",5
"lib2","SARS-CoV-2","AAGTGAATATGGTTCA",2,71.65,10.87,0.04,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGAATTGAGGTAG",6,140.38,10.78,-0.06,0.05,2.87,1.15,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","AAGTGACAACGGTGCG",4,21.35,6,-4.84,1.43,3,1.22,0.01,">1 nonsynonymous","C49T A105K P169V G174L",4
"lib2","SARS-CoV-2","AAGTGACAATGACACA",1,16.42,10.61,-0.23,0.07,2.97,1.06,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","AAGTGACATAACCCAT",4,15.42,10.65,-0.18,0.06,2.97,1.06,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","AAGTGACATGAAATAA",5,109.64,10.55,-0.29,0.03,2.91,1.06,0,">1 nonsynonymous","R78Q D90H",2
"lib2","SARS-CoV-2","AAGTGACCGCAAGCTG",3,143.21,10.09,-0.74,0.06,2.77,1.04,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","AAGTGACCTATAGCGG",7,22.35,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","D34H Q168P",2
"lib2","SARS-CoV-2","AAGTGACGACCGAAAC",4,42.81,9.08,-1.76,0.08,2.96,1.1,0,">1 nonsynonymous","K56S G117N",2
"lib2","SARS-CoV-2","AAGTGACTAAGTACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40D T46A Y93M F134P F156R F167N G174T",7
"lib2","SARS-CoV-2","AAGTGAGCATTATAAC",1,17.31,8.91,-1.92,0.26,1.9,1.15,0.03,">1 nonsynonymous","C61V Y165L",2
"lib2","SARS-CoV-2","AAGTGAGGCCTGGACA",1,49.35,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C31T L38E T55N I80K S147N T201P",6
"lib2","SARS-CoV-2","AAGTGAGTCCCCCATA",2,30.73,10,-0.83,0.07,2.83,1,0,">1 nonsynonymous","Y35R K114E K198E",3
"lib2","SARS-CoV-2","AAGTGATAAAGTTGTG",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S D90Y L122Y I138R T148L G174V",6
"lib2","SARS-CoV-2","AAGTGATAAATTTCTA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGATAACTAGATT",9,94.67,10.18,-0.66,0.06,2.78,1.08,0,">1 nonsynonymous","I28M F44P A67C S164C",4
"lib2","SARS-CoV-2","AAGTGATCCATAATTA",1,2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","AAGTGATGAATGTGAA",8,61.62,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V77K F167T",2
"lib2","SARS-CoV-2","AAGTGATGGTTCACAA",16,111.97,9.01,-1.83,0.1,1.75,1.1,0,"1 nonsynonymous","F12P",1
"lib2","SARS-CoV-2","AAGTGATTAAAATTTT",8,19.38,6.13,-4.7,0.92,1.5,1.15,0.01,">1 nonsynonymous","N58T V71W L95N K199T",4
"lib2","SARS-CoV-2","AAGTGATTGCACAGTG",1,23.6,10.35,-0.49,0.07,2.94,1,0,">1 nonsynonymous","Y66S T85R K132S",3
"lib2","SARS-CoV-2","AAGTGCAAATAATGGT",8,96.63,10.81,-0.02,0.04,2.91,1.09,0,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","AAGTGCAACCGACTAC",4,210.09,10.74,-0.09,0.04,2.92,1.06,0,">1 nonsynonymous","I2W R136K",2
"lib2","SARS-CoV-2","AAGTGCAACTCATATC",11,109.85,10.07,-0.77,0.06,2.72,1.07,0,">1 nonsynonymous","L57W Q84S D90L",3
"lib2","SARS-CoV-2","AAGTGCACGCTTATCA",3,108.26,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N13D N157C G166K",3
"lib2","SARS-CoV-2","AAGTGCAGCATTCATT",4,41.59,10.73,-0.1,0.04,3,1,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","AAGTGCAGGTTAAAGA",5,41.25,10.79,-0.05,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGCATGACGAATC",6,302.91,9.79,-1.04,0.04,2.54,1.02,0,">1 nonsynonymous","E141W P149C",2
"lib2","SARS-CoV-2","AAGTGCCAACATAATC",3,6.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9T C49W L183G",3
"lib2","SARS-CoV-2","AAGTGCCACAAGCAAC",1,14.99,10.75,-0.09,0.07,2.96,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGCCAGTGCCTTA",1,19.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","AAGTGCCATGGTTTTA",2,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E V37S D90N V103Q",4
"lib2","SARS-CoV-2","AAGTGCCCAAAACACA",14,158.05,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19E C31I L57V",3
"lib2","SARS-CoV-2","AAGTGCCCTCGGTGAT",2,12.82,8.49,-2.35,0.27,1.96,1.13,0.03,">1 nonsynonymous","N107T V115M P149K",3
"lib2","SARS-CoV-2","AAGTGCCGAATGCTTT",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76F D98A N151P S184D",4
"lib2","SARS-CoV-2","AAGTGCCTTATCCAAC",3,18.86,10.87,0.04,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGCGAGAAAACAG",20,170.93,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P54R G101T",2
"lib2","SARS-CoV-2","AAGTGCTATAATAAAG",10,146.75,10.44,-0.4,0.04,2.94,1.04,0,"1 nonsynonymous","F62K",1
"lib2","SARS-CoV-2","AAGTGCTGTGCATCCG",2,62.35,10.59,-0.25,0.05,2.87,1.13,0,">1 nonsynonymous","G9A E141T P191V",3
"lib2","SARS-CoV-2","AAGTGCTTATAAGGAC",13,84.06,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S53F Q84H G116C S129L",4
"lib2","SARS-CoV-2","AAGTGGAAATGAACGT",5,82.68,10.78,-0.06,0.04,2.97,1.03,0,">1 nonsynonymous","D97T L131I",2
"lib2","SARS-CoV-2","AAGTGGACATAAAACT",6,83.39,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","N1I G9L Y39S V103C Q176L",5
"lib2","SARS-CoV-2","AAGTGGACTGCTCTAT",3,0.25,NA,NA,NA,NA,NA,NA,"stop","V20G A81T N120A S129*",4
"lib2","SARS-CoV-2","AAGTGGACTTAGGGAA",5,66.26,10.81,-0.03,0.07,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGGAGCAAAAAAT",1,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AAGTGGAGCGCCGGCG",10,9.5,10.06,-0.78,0.24,2.19,1,0.03,">1 nonsynonymous","T15N A81P V182D",3
"lib2","SARS-CoV-2","AAGTGGAGCTGAATGG",1,1.31,NA,NA,NA,NA,NA,NA,"stop","L38* E76R T140Y V173L",4
"lib2","SARS-CoV-2","AAGTGGATAAAGACGG",7,104.54,9.81,-1.02,0.05,2.08,1.08,0,">1 nonsynonymous","A14M D97C G146S Q163T",4
"lib2","SARS-CoV-2","AAGTGGATACAGGATA",13,74.31,6,-4.84,0.62,1.5,1.06,0,">1 nonsynonymous","F8C S45Y N107G H189Y",4
"lib2","SARS-CoV-2","AAGTGGCCACTATGAG",17,119.84,8.05,-2.79,0.16,1.5,1.13,0.01,"1 nonsynonymous","Y123D",1
"lib2","SARS-CoV-2","AAGTGGCTAACTGCAG",4,49.29,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","P82V W106T P133G F160I",4
"lib2","SARS-CoV-2","AAGTGGCTATCATCCC",1,22.93,6,-4.84,1.12,1.5,1.12,0.01,">1 nonsynonymous","N107K L125T T170P",3
"lib2","SARS-CoV-2","AAGTGGCTCCATAGCT",14,34.41,7.06,-3.78,0.23,1.5,1.08,0.01,">1 nonsynonymous","L60M V77L D98Y I104T P133G",5
"lib2","SARS-CoV-2","AAGTGGGAGGTATTCT",3,64.65,10.18,-0.66,0.04,2.78,1.05,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","AAGTGGGATGCCCAAC",5,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H G196L",2
"lib2","SARS-CoV-2","AAGTGGGGCGTGTCCG",7,140.85,10.3,-0.54,0.05,2.81,1.08,0,">1 nonsynonymous","T15S A22T V77I",3
"lib2","SARS-CoV-2","AAGTGGTAAGCACCTA",1,19.23,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L57I P82N G146W E154L",4
"lib2","SARS-CoV-2","AAGTGGTCCACATATA",2,2.8,NA,NA,NA,NA,NA,NA,"stop","E76* T148I K199S",3
"lib2","SARS-CoV-2","AAGTGGTCCTTCACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* V37K D59V",3
"lib2","SARS-CoV-2","AAGTGGTTACAATAGT",4,4.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AAGTGGTTGAATCCCT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","Y21T G51W C61H K87*",4
"lib2","SARS-CoV-2","AAGTGTAACTTAGCAC",2,2.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103Q",1
"lib2","SARS-CoV-2","AAGTGTACCAGCCCCG",6,1,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","AAGTGTACCCGTGAAC",8,48.84,6,-4.84,1.67,1.5,1.07,0.01,">1 nonsynonymous","S19W C61E P169G",3
"lib2","SARS-CoV-2","AAGTGTATATAGTCCC",2,3.55,NA,NA,NA,NA,NA,NA,"stop","I2W F99H K199*",3
"lib2","SARS-CoV-2","AAGTGTCAATTAAGAT",6,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F S45Y D98M V181A",4
"lib2","SARS-CoV-2","AAGTGTCACTCACGTT",2,105.48,10.63,-0.2,0.04,2.94,1.06,0,">1 nonsynonymous","T55I E141V",2
"lib2","SARS-CoV-2","AAGTGTCCTGATTAGG",2,44.68,9.46,-1.38,0.1,1.93,1.05,0.01,">1 nonsynonymous","F47S P149C",2
"lib2","SARS-CoV-2","AAGTGTGTTTTTGAAT",2,37.17,9.94,-0.9,0.39,1.5,1,0.07,">1 nonsynonymous","C49L K87M L162T",3
"lib2","SARS-CoV-2","AAGTGTTAAAAAATAT",5,25.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61K V71D W106Q R179M",4
"lib2","SARS-CoV-2","AAGTGTTAATAACTAG",2,10.49,6.3,-4.53,0.72,1.91,1.08,0,">1 nonsynonymous","I104E C150A",2
"lib2","SARS-CoV-2","AAGTGTTACCAAAAAA",14,54.29,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A33K K87Y K132N C150I P169M",5
"lib2","SARS-CoV-2","AAGTGTTATAAAAGGA",4,45.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58K Y66M I104Y Y121S L131D",5
"lib2","SARS-CoV-2","AAGTGTTATACAAGAG",1,5.01,6,-4.84,2,3,1,0,">1 nonsynonymous","L5D D90P",2
"lib2","SARS-CoV-2","AAGTGTTCACTGCTGG",17,254.56,8.7,-2.14,0.05,2.86,1.08,0,">1 nonsynonymous","T3D N58R G166L",3
"lib2","SARS-CoV-2","AAGTGTTGTAGACATT",1,6.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52G K94P G166Q T201C",4
"lib2","SARS-CoV-2","AAGTGTTGTTCTAGTC",3,39.58,10.29,-0.55,0.05,2.83,1.16,0,"1 nonsynonymous","P7I",1
"lib2","SARS-CoV-2","AAGTGTTTAAAGGGTC",1,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L E154I P161M F185E",4
"lib2","SARS-CoV-2","AAGTTAAAATGACACT",6,127.84,8.42,-2.42,0.15,2.67,1.04,0.01,">1 nonsynonymous","T100N N157R",2
"lib2","SARS-CoV-2","AAGTTAAACACTGAAA",7,1.13,NA,NA,NA,NA,NA,NA,"stop","V37* T63K S147P V173L",4
"lib2","SARS-CoV-2","AAGTTAAACCCGCACT",1,37.01,10.84,0,0.07,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTAAACTGGTCAA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","C6N Y35* K94I",3
"lib2","SARS-CoV-2","AAGTTAAAGTAATGAT",5,24.02,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6S C49K G83Y Y93G L187P",5
"lib2","SARS-CoV-2","AAGTTAAATAAACCGG",3,46.13,9.92,-0.92,0.07,2.79,1.05,0,">1 nonsynonymous","C6G S41Q A105S",3
"lib2","SARS-CoV-2","AAGTTAAATGCATGAC",2,0.3,NA,NA,NA,NA,NA,NA,"stop","T46D P54T G83R N107G S113V L122S P149*",7
"lib2","SARS-CoV-2","AAGTTAAATTTTGATT",1,56.72,9.79,-1.04,0.1,1.94,1.11,0,">1 nonsynonymous","R136F F160M",2
"lib2","SARS-CoV-2","AAGTTAACACACACTA",1,50.63,10.73,-0.1,0.1,2.88,1.11,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","AAGTTAACACCAGGGA",6,140.9,10.84,0,0.05,2.89,1.11,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","AAGTTAACCGTCTCCT",1,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42W C49V T140L N151I T170N",5
"lib2","SARS-CoV-2","AAGTTAACGAAACAGT",4,35.1,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44L K87D G101P",3
"lib2","SARS-CoV-2","AAGTTAAGAAAATCAC",3,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y K87S P96L L122W F160C",5
"lib2","SARS-CoV-2","AAGTTAAGATAGCAAA",2,38.48,10.13,-0.71,0.08,2.87,1.04,0,">1 nonsynonymous","N118Y N151K",2
"lib2","SARS-CoV-2","AAGTTAAGGCAGAACC",6,1.9,NA,NA,NA,NA,NA,NA,"stop","L5* K87D S108R V115F K199*",5
"lib2","SARS-CoV-2","AAGTTAAGTTATTACG",1,9.14,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","I2S P54R Y91H V103E",4
"lib2","SARS-CoV-2","AAGTTAATACTTAATA",5,47.39,6,-4.84,2,3,1.08,0,">1 nonsynonymous","I88L P161T G196E",3
"lib2","SARS-CoV-2","AAGTTAATCCTCAATA",6,30.02,10.1,-0.74,0.08,2.4,1,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","AAGTTAATCGAAAAGT",1,18.42,10.57,-0.27,0.08,3,1.04,0,">1 nonsynonymous","Y35I K114L",2
"lib2","SARS-CoV-2","AAGTTAATCGCTCAAA",6,94.01,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","I2D A14N V103L Q176C K198T",5
"lib2","SARS-CoV-2","AAGTTACAACTATGCA",2,39.88,10.13,-0.7,0.12,2.72,1,0.01,">1 nonsynonymous","L5N D34C S43R A105T",4
"lib2","SARS-CoV-2","AAGTTACAGCAGGATT",6,59.52,9.37,-1.46,0.12,1.83,1.11,0.01,">1 nonsynonymous","N1L P96A E141C",3
"lib2","SARS-CoV-2","AAGTTACATAAGTTTA",4,118.44,8.66,-2.17,0.09,2.46,1.14,0,">1 nonsynonymous","T3Q D90S N130V G174V",4
"lib2","SARS-CoV-2","AAGTTACATACCACTG",3,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C R27Y E76R",3
"lib2","SARS-CoV-2","AAGTTACCGCCAAAAA",2,19.03,6.63,-4.21,0.58,1.5,1.06,0.02,">1 nonsynonymous","V20M V52I W106C Y165D",4
"lib2","SARS-CoV-2","AAGTTACGAATTACAC",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A D112M",2
"lib2","SARS-CoV-2","AAGTTACGACTCCACT",11,91.75,7.24,-3.6,0.17,1.81,1.14,0.01,">1 nonsynonymous","Q84V C158S",2
"lib2","SARS-CoV-2","AAGTTACGGTCTTGTT",3,8.96,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3P S19V F70V P96F K114V F156W",6
"lib2","SARS-CoV-2","AAGTTACGTGCGAATG",3,42.69,9.12,-1.72,0.09,2.85,1.07,0,">1 nonsynonymous","F44N T148P V173I",3
"lib2","SARS-CoV-2","AAGTTACTAATGGAAC",7,83.72,10.85,0.02,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTACTCCCAATTC",11,123.74,10.16,-0.67,0.04,2.85,1.07,0,"1 nonsynonymous","C6Q",1
"lib2","SARS-CoV-2","AAGTTACTCTCACCAA",9,124.29,9.3,-1.53,0.05,2.85,1.11,0,">1 nonsynonymous","L5W K94H Y159F",3
"lib2","SARS-CoV-2","AAGTTACTGCGAGAAA",7,0,NA,NA,NA,NA,NA,NA,"stop","F126*",1
"lib2","SARS-CoV-2","AAGTTAGAAAGGGAAT",3,57.48,10.79,-0.04,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTAGAACTATCAT",4,1.63,NA,NA,NA,NA,NA,NA,"stop","A18P A105V L122* Y143S",4
"lib2","SARS-CoV-2","AAGTTAGAAGCCATGC",8,39.51,6,-4.84,1.34,1.5,1.15,0.01,">1 nonsynonymous","P82T T100S A105S L131M",4
"lib2","SARS-CoV-2","AAGTTAGTGGCGAACC",2,82,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V71E D98I P161I Y178T",4
"lib2","SARS-CoV-2","AAGTTAGTTCATAGTA",12,106.28,6.63,-4.21,0.08,1.9,1.11,0,">1 nonsynonymous","I2V P133V Y143E P191C",4
"lib2","SARS-CoV-2","AAGTTATAACAATAAA",2,33.61,10.77,-0.06,0.05,2.92,1.08,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","AAGTTATAAGAAATCC",5,17.2,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9P F70P L183N",3
"lib2","SARS-CoV-2","AAGTTATAATATCAAC",6,93.2,10.92,0.09,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTATACCACGTTC",2,1.62,NA,NA,NA,NA,NA,NA,"stop","T55F D68L K87Y L95* V173R",5
"lib2","SARS-CoV-2","AAGTTATATCATAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","L95* P161H",2
"lib2","SARS-CoV-2","AAGTTATATGATCAGC",3,74.43,9.92,-0.92,0.08,2.11,1.03,0,">1 nonsynonymous","L5M W106L",2
"lib2","SARS-CoV-2","AAGTTATCAAAGTAAT",1,10.06,6,-4.84,2,1.5,1.25,0.05,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","AAGTTATCAACACCCT",13,176.49,8.43,-2.4,0.06,1.75,1.06,0,">1 nonsynonymous","V11G N109Q",2
"lib2","SARS-CoV-2","AAGTTATCATCCGAGA",4,41.9,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I88G F160M A190V",3
"lib2","SARS-CoV-2","AAGTTATCATGGATAG",7,30.46,8.09,-2.75,0.4,1.5,1,0.07,">1 nonsynonymous","F44T K94A C150L",3
"lib2","SARS-CoV-2","AAGTTATCCAAAGTAC",16,72.84,6.14,-4.69,0.61,1.5,1.21,0.01,">1 nonsynonymous","L5D N24G P54S N58S I138K Y143L",6
"lib2","SARS-CoV-2","AAGTTATCGCACCACT",5,13.76,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2L F99P E141V N151D",4
"lib2","SARS-CoV-2","AAGTTATCGGTTATCG",2,18.96,10.57,-0.26,0.07,2.94,1.08,0,">1 nonsynonymous","I2L V37G V52Y",3
"lib2","SARS-CoV-2","AAGTTATGAACTCTAC",5,83.78,10.54,-0.29,0.03,2.91,1.07,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","AAGTTATTGACCTCAG",2,81.88,10.66,-0.18,0.02,2.93,1.06,0,">1 nonsynonymous","A33L V115L",2
"lib2","SARS-CoV-2","AAGTTATTGATCTGAA",5,84.17,10.92,0.08,0.05,2.9,1.08,0,">1 nonsynonymous","D97S V173M",2
"lib2","SARS-CoV-2","AAGTTCAACCATTCCG",12,133.66,10.36,-0.48,0.03,2.9,1.05,0,">1 nonsynonymous","T15H T63S Q84V",3
"lib2","SARS-CoV-2","AAGTTCACAATACCAT",8,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64D I88A K114Q L122A L162K",5
"lib2","SARS-CoV-2","AAGTTCACTAACAAGG",2,66.14,8.88,-1.96,0.05,2.86,1.07,0,">1 nonsynonymous","A14S Y119L",2
"lib2","SARS-CoV-2","AAGTTCATCACCTCCT",4,56.09,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A14D T63H A105L N118L L125T V173K",6
"lib2","SARS-CoV-2","AAGTTCATGGCGTGGG",6,57.97,6,-4.84,2,2.11,1.22,0.01,">1 nonsynonymous","G51Q D68R W106S L122N T148R K198G",6
"lib2","SARS-CoV-2","AAGTTCATTGAAACAA",6,2546.27,10.79,-0.04,0.03,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGTTCCACCCTCGCA",7,7.44,NA,NA,NA,NA,NA,NA,"stop","P54* D68* G146R Q163M R179N",5
"lib2","SARS-CoV-2","AAGTTCCACGATGCCT",3,29.53,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","N4T A33E L95T W106N",4
"lib2","SARS-CoV-2","AAGTTCCACTTAAGTA",9,177.51,10.83,-0.01,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AAGTTCCCACGAATTA",2,16.95,10.9,0.06,0.1,2.85,1.15,0.01,"1 nonsynonymous","Q84S",1
"lib2","SARS-CoV-2","AAGTTCCCGACTCCTA",6,224.9,10.58,-0.25,0.04,2.87,1.07,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","AAGTTCCCTTATGAAA",2,69.73,10.05,-0.79,0.07,2.43,1.06,0,">1 nonsynonymous","W106T I138M",2
"lib2","SARS-CoV-2","AAGTTCCTACTACATA",3,15.08,6.12,-4.71,2,1.5,1.16,0.02,">1 nonsynonymous","T3A F44A D112V V182A",4
"lib2","SARS-CoV-2","AAGTTCCTATATACTG",1,31.96,9.49,-1.34,0.06,2.84,1.12,0,">1 nonsynonymous","F44V T55Y F156T",3
"lib2","SARS-CoV-2","AAGTTCCTTTATTATA",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S R16G Y21V F44N T55N",5
"lib2","SARS-CoV-2","AAGTTCGAGCCCTGAG",2,85.4,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V37Y S53T G83N D97S L111Q Y175G",6
"lib2","SARS-CoV-2","AAGTTCGCAATCCATA",13,117.96,10.42,-0.41,0.05,2.99,1.04,0,">1 nonsynonymous","C61T F156P",2
"lib2","SARS-CoV-2","AAGTTCTAAATGCAAT",1,25.04,6.77,-4.07,0.46,1.9,1.17,0.03,">1 nonsynonymous","T3P D68M G83S N157H S200Y",5
"lib2","SARS-CoV-2","AAGTTCTAACTAGACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7F V37S D112F L122K E154R",5
"lib2","SARS-CoV-2","AAGTTCTCATACATTT",19,4.5,NA,NA,NA,NA,NA,NA,"stop","F17* S53L P149* Q176L",4
"lib2","SARS-CoV-2","AAGTTCTGCTTGAAAG",1,7.27,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","Y50V A105F Y159W",3
"lib2","SARS-CoV-2","AAGTTCTTCCTAGTTA",8,0.02,NA,NA,NA,NA,NA,NA,"stop","W23T L38S V77L F134V G146* G155Y",6
"lib2","SARS-CoV-2","AAGTTGAAAGGATAAA",9,92.1,10.49,-0.35,0.04,2.92,1.05,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","AAGTTGAAGTGCATAT",4,114.58,10.2,-0.64,0.05,2.79,1.03,0,">1 nonsynonymous","A14S V37E T85L",3
"lib2","SARS-CoV-2","AAGTTGAATATATATG",3,35.96,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","F17K L60A Q84I",3
"lib2","SARS-CoV-2","AAGTTGAATCGATCAC",3,13.7,8.59,-2.25,0.5,1.5,1,0.08,">1 nonsynonymous","F17R E141L T148Y",3
"lib2","SARS-CoV-2","AAGTTGACAAATTTTC",1,10.46,7.15,-3.69,0.35,2.09,1.2,0.03,">1 nonsynonymous","A33D S139I",2
"lib2","SARS-CoV-2","AAGTTGACCGTATATA",7,52.28,10.68,-0.15,0.03,2.98,1.01,0,"1 nonsynonymous","Q144M",1
"lib2","SARS-CoV-2","AAGTTGACCTTACCTA",1,8.69,NA,NA,NA,NA,NA,NA,"stop","C61L D68V Y91S V115L S129* P149W",6
"lib2","SARS-CoV-2","AAGTTGAGCTAATATA",6,66.64,10.87,0.04,0.03,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTGAGGCGGCTCT",2,12.93,7.95,-2.88,0.25,1.5,1.16,0.02,">1 nonsynonymous","I2P N40M D97R G116T P133S V173R",6
"lib2","SARS-CoV-2","AAGTTGAGGGATTGAC",3,27.55,10.73,-0.11,0.07,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTGAGTGTTACCG",11,167.45,10.27,-0.57,0.04,2.8,1.02,0,">1 nonsynonymous","S29F A42V A105S L187R S200T",5
"lib2","SARS-CoV-2","AAGTTGATATCAACCG",2,42.19,10.61,-0.22,0.03,2.94,1.07,0,"1 nonsynonymous","Y35T",1
"lib2","SARS-CoV-2","AAGTTGATGAAGTTAA",3,29.43,10.76,-0.08,0.06,2.89,1.12,0,"1 nonsynonymous","Q84K",1
"lib2","SARS-CoV-2","AAGTTGCACACTCTAT",3,7.9,10.35,-0.49,0.25,2.43,1.09,0.05,">1 nonsynonymous","R78H I104D",2
"lib2","SARS-CoV-2","AAGTTGCAGCGAAGTT",2,6.96,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K87E N92S G117Y P169A",4
"lib2","SARS-CoV-2","AAGTTGCAGGTAAAAA",18,260.02,10.21,-0.63,0.05,2.64,1.03,0,">1 nonsynonymous","N40T R136I",2
"lib2","SARS-CoV-2","AAGTTGCATATAGTAA",4,21.11,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13R F99A Q163L",3
"lib2","SARS-CoV-2","AAGTTGCCCTCCACAA",2,11.25,8.4,-2.43,0.24,1.6,1.2,0.02,">1 nonsynonymous","C61T W106L F160I",3
"lib2","SARS-CoV-2","AAGTTGCCTATAGATG",5,137.23,10.51,-0.32,0.07,2.86,1.03,0,"1 nonsynonymous","G174P",1
"lib2","SARS-CoV-2","AAGTTGCGAGACTGTC",6,50.08,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T100N F167G S184V",3
"lib2","SARS-CoV-2","AAGTTGCTAACTCATC",3,63.19,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","Y143E G155C G166T G174E",4
"lib2","SARS-CoV-2","AAGTTGCTCAATGTAG",9,14.37,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14T Y21R P96R V103S G116S A145I S184N",7
"lib2","SARS-CoV-2","AAGTTGGATCTTTCAC",13,104.75,7.09,-3.75,0.23,1.5,1.07,0.01,">1 nonsynonymous","F17G G86S",2
"lib2","SARS-CoV-2","AAGTTGGCGTGTGGGA",8,119.26,10.02,-0.82,0.04,2.9,1.08,0,">1 nonsynonymous","P169T G174M",2
"lib2","SARS-CoV-2","AAGTTGGGGTTTTTAA",2,47.58,6.09,-4.75,0.7,1.5,1.09,0.01,">1 nonsynonymous","C6R V32L V115S Y175G",4
"lib2","SARS-CoV-2","AAGTTGGTACTCAATT",1,27.55,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G9P N40I G74C",3
"lib2","SARS-CoV-2","AAGTTGGTGAAGAATC",13,112.14,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V103I N109H T140R L162Q S200V",5
"lib2","SARS-CoV-2","AAGTTGGTGACGTTAC",5,5.5,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","F12W C49P",2
"lib2","SARS-CoV-2","AAGTTGGTTGCATTCT",15,151.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y21M R27A N92S K114L G146F",5
"lib2","SARS-CoV-2","AAGTTGTAAAACCCGC",7,21.77,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","T3I L57R V77Q Y121H",4
"lib2","SARS-CoV-2","AAGTTGTAATGTAGGG",2,3.48,NA,NA,NA,NA,NA,NA,"stop","Q79* G174W",2
"lib2","SARS-CoV-2","AAGTTGTAGAATATAA",3,67.34,10.82,-0.01,0.03,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTGTATACTCAGA",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E Y39V S139Y E154M",4
"lib2","SARS-CoV-2","AAGTTGTATGGAACGT",2,32.33,10.82,-0.02,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTGTCACAGAAAC",1,6.7,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","A18T S69K A145F",3
"lib2","SARS-CoV-2","AAGTTGTGAGCCCGAA",11,1.03,NA,NA,NA,NA,NA,NA,"stop","G117I E154*",2
"lib2","SARS-CoV-2","AAGTTGTGTTATACCG",9,120.62,7.89,-2.95,0.07,1.99,1.07,0,">1 nonsynonymous","T3S F134Y C150G",3
"lib2","SARS-CoV-2","AAGTTGTTGCCTGCTT",6,109.1,6,-4.84,2,3,1.23,0,">1 nonsynonymous","G9V S113K Q144E Y175L",4
"lib2","SARS-CoV-2","AAGTTTAAAGAAACAT",3,0.35,NA,NA,NA,NA,NA,NA,"stop","V52I G86M D90L Q168*",4
"lib2","SARS-CoV-2","AAGTTTAAATGAAATA",3,15.66,10.06,-0.77,0.11,2.93,1,0,">1 nonsynonymous","G116Y L122R G174R K198L",4
"lib2","SARS-CoV-2","AAGTTTAACTATGTAA",16,161.88,9.61,-1.23,0.06,2.84,1.07,0,">1 nonsynonymous","S36L S53C K87S",3
"lib2","SARS-CoV-2","AAGTTTAAGAATACAC",3,7.55,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","I88N C150G T170R",3
"lib2","SARS-CoV-2","AAGTTTAATTAAATTA",3,76.82,10.19,-0.64,0.02,2.97,1.04,0,">1 nonsynonymous","R16F T46R L125A",3
"lib2","SARS-CoV-2","AAGTTTACAGTGAACA",10,7.71,NA,NA,NA,NA,NA,NA,"stop","E10Y A33* A81R A89S P96S G174Y",6
"lib2","SARS-CoV-2","AAGTTTACTTGATAAT",8,98.4,10.37,-0.47,0.04,2.95,1.04,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","AAGTTTAGAAAGTGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D68G T100N F134* F160S",4
"lib2","SARS-CoV-2","AAGTTTAGACACAATC",5,57.66,6.15,-4.68,1.06,1.5,1.13,0.04,">1 nonsynonymous","V11R P82C G152C F156R",4
"lib2","SARS-CoV-2","AAGTTTAGGCAATTGG",2,61.88,8.15,-2.69,0.15,1.87,1.15,0.01,">1 nonsynonymous","N1V N107L",2
"lib2","SARS-CoV-2","AAGTTTAGTCTAAATG",8,97.23,8.36,-2.47,0.13,1.82,1.14,0.01,">1 nonsynonymous","P133T G146N",2
"lib2","SARS-CoV-2","AAGTTTATCATGACAC",1,15.55,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A89S N120Y G172R",3
"lib2","SARS-CoV-2","AAGTTTATGTAAGTTC",4,7.47,6.2,-4.64,0.75,3,1.13,0.02,">1 nonsynonymous","A33F K94V G101S",3
"lib2","SARS-CoV-2","AAGTTTCACCAACCAT",3,23.03,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V11S F47S A89N S129V Y165D",5
"lib2","SARS-CoV-2","AAGTTTCACGATTGCG",9,202.51,10.64,-0.19,0.03,2.94,1.06,0,">1 nonsynonymous","G9S G116T",2
"lib2","SARS-CoV-2","AAGTTTCAGTCTGCAT",2,6.38,NA,NA,NA,NA,NA,NA,"stop","G51H E135*",2
"lib2","SARS-CoV-2","AAGTTTCATTATAACA",6,99.41,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K56L V103T W106C S129T",4
"lib2","SARS-CoV-2","AAGTTTCCACATGCGT",1,42.98,10.78,-0.06,0.15,2.63,1.23,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTTCTCAAACAAG",2,58.53,8.53,-2.3,0.09,2.93,1.07,0,">1 nonsynonymous","C61S N157H",2
"lib2","SARS-CoV-2","AAGTTTCTCTGAGTAG",11,314.94,10.1,-0.74,0.04,2.63,1.02,0,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","AAGTTTGAAAGCCCAC",11,139.76,10.22,-0.61,0.03,2.88,1.02,0,">1 nonsynonymous","S41H N58V Q84R",3
"lib2","SARS-CoV-2","AAGTTTGAATTACCGC",2,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81P C102T S139F",3
"lib2","SARS-CoV-2","AAGTTTGATTACGTTC",7,49.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y66S Y93D F99L L125K",4
"lib2","SARS-CoV-2","AAGTTTGCCCCGAGAC",2,36.58,9.48,-1.36,0.1,2.08,1,0,">1 nonsynonymous","N13L Y91M",2
"lib2","SARS-CoV-2","AAGTTTGCGCATTTAA",12,424.79,9.85,-0.99,0.05,2.54,1.02,0,">1 nonsynonymous","A18D S164L",2
"lib2","SARS-CoV-2","AAGTTTGGCATATACC",2,11.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4T S69R W106G",3
"lib2","SARS-CoV-2","AAGTTTGTTACGCAGT",1,6.39,8.85,-1.98,0.15,1.78,1.04,0.01,">1 nonsynonymous","F44R N107R",2
"lib2","SARS-CoV-2","AAGTTTGTTCTAGAAC",3,45.9,10.03,-0.8,0.13,2.25,1.05,0.01,">1 nonsynonymous","S29G P96T",2
"lib2","SARS-CoV-2","AAGTTTTAACAATGCA",8,0.62,NA,NA,NA,NA,NA,NA,"stop","Y35V G51F L60* Y91I P169S V173A L183S",7
"lib2","SARS-CoV-2","AAGTTTTCCAACCAAA",5,105.9,9.68,-1.16,0.04,2.94,1.02,0,">1 nonsynonymous","G9K V32T Y39G K132N T140E T170S",6
"lib2","SARS-CoV-2","AAGTTTTGCGAAAAAC",14,233.82,10.11,-0.72,0.04,2.79,1.04,0,">1 nonsynonymous","F44T L60H",2
"lib2","SARS-CoV-2","AAGTTTTTACATAAAA",1,29.52,10.02,-0.81,0.22,1.58,1.11,0.02,">1 nonsynonymous","T3V V37S C49Y",3
"lib2","SARS-CoV-2","AAGTTTTTCAACTAAA",10,269.46,10.81,-0.02,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AAGTTTTTCGGCATTA",8,158.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K26S N92R I142P V173F",4
"lib2","SARS-CoV-2","AAGTTTTTGGAATTTG",1,21.43,7.13,-3.71,0.23,1.87,1.07,0.01,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","AAGTTTTTTGTACGGA",6,32.07,10.73,-0.11,0.07,2.96,1,0,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","AAGTTTTTTTATCGCC",2,29.95,9.85,-0.99,0.1,2.68,1.04,0,">1 nonsynonymous","C6T G83C",2
"lib2","SARS-CoV-2","AATAAAAAAAATATGA",1,13.06,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C31S P96F K198F",3
"lib2","SARS-CoV-2","AATAAAAAACAATTAG",7,52.76,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G83I D137S K198A",3
"lib2","SARS-CoV-2","AATAAAAACAGATCAA",5,125.14,10.72,-0.11,0.05,2.91,1.12,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","AATAAAAACATAACAA",15,149.04,10.73,-0.1,0.05,2.98,1,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","AATAAAAACCGGAGAC",5,41.7,9.98,-0.85,0.06,2.91,1.05,0,"1 nonsynonymous","N118V",1
"lib2","SARS-CoV-2","AATAAAAACGTCGCAG",7,111.17,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","A18E Y35L P149F N157C",4
"lib2","SARS-CoV-2","AATAAAAATCCTTCTT",2,15.87,10.69,-0.15,0.11,2.96,1.09,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","AATAAAAATCGTATAA",2,20.11,10.17,-0.67,0.09,3,1.01,0,">1 nonsynonymous","N110Y L125G",2
"lib2","SARS-CoV-2","AATAAAAATGACACAC",3,36.31,9.38,-1.46,0.13,1.86,1.06,0.01,">1 nonsynonymous","K26M L38N",2
"lib2","SARS-CoV-2","AATAAAAATGTTCAAA",8,4.03,NA,NA,NA,NA,NA,NA,"stop","E10N I72Y Y93* C102K D112I",5
"lib2","SARS-CoV-2","AATAAAACAAAGTGGA",20,171.86,10.69,-0.15,0.03,2.98,1.01,0,"1 nonsynonymous","A67C",1
"lib2","SARS-CoV-2","AATAAAACACTCCAAA",10,96.86,8.59,-2.25,0.07,2.92,1.07,0,"1 nonsynonymous","I142G",1
"lib2","SARS-CoV-2","AATAAAACATTACTTC",6,46.93,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L38S D68E E141M P149T",4
"lib2","SARS-CoV-2","AATAAAACCAAAACGA",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I L57V D90A",3
"lib2","SARS-CoV-2","AATAAAACCAGGGAAA",1,28.86,10.85,0.01,0.08,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAAACCGGTGACC",1,10.76,8.8,-2.03,0.17,2.55,1.09,0.02,">1 nonsynonymous","P7V T55L L95I T170H",4
"lib2","SARS-CoV-2","AATAAAACCTATGATA",10,6.32,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C61S D98R A105P",3
"lib2","SARS-CoV-2","AATAAAACGAAGTCCC",5,155.67,10.54,-0.3,0.04,2.99,1.01,0,">1 nonsynonymous","L38I F62H",2
"lib2","SARS-CoV-2","AATAAAACGGATATTA",4,34.37,7.42,-3.42,0.18,1.5,1.11,0.01,"1 nonsynonymous","C150R",1
"lib2","SARS-CoV-2","AATAAAACGTTTTATC",19,172.1,9.54,-1.3,0.04,2.79,1.08,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","AATAAAACTACACAGA",15,151.28,9.41,-1.43,0.07,1.67,1.08,0,"1 nonsynonymous","Y50L",1
"lib2","SARS-CoV-2","AATAAAACTTCGCACG",2,21.12,6,-4.84,2,3,1.23,0.03,">1 nonsynonymous","N64I V103L S147R T170K",4
"lib2","SARS-CoV-2","AATAAAAGAAACTGGA",1,32.67,9.46,-1.37,0.12,2.42,1.06,0.01,">1 nonsynonymous","A33C Y39C A145S F185L",4
"lib2","SARS-CoV-2","AATAAAAGAAATAATT",1,1.07,NA,NA,NA,NA,NA,NA,"stop","Y35G L60A P96T V173*",4
"lib2","SARS-CoV-2","AATAAAAGAAATATCT",3,21.48,10.99,0.16,0.11,2.85,1.15,0,">1 nonsynonymous","A42E C61V N171T",3
"lib2","SARS-CoV-2","AATAAAAGAAGCCCGA",8,103.2,8.62,-2.22,0.09,2.94,1.1,0,">1 nonsynonymous","K56T G117Y Q168A",3
"lib2","SARS-CoV-2","AATAAAAGATTATAAA",2,70.17,9.84,-1,0.06,2.18,1.11,0,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","AATAAAAGCGATTATT",1,7.79,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8T D90L A105E V115G",4
"lib2","SARS-CoV-2","AATAAAAGGCCATATA",7,71.34,10.32,-0.51,0.04,2.86,1.09,0,">1 nonsynonymous","S41L S53F",2
"lib2","SARS-CoV-2","AATAAAAGGGAACGTA",3,18.21,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15G N40V I88L F99A L122E K128G C158L",7
"lib2","SARS-CoV-2","AATAAAAGTAACTAAT",7,67.45,10.73,-0.1,0.05,2.9,1.09,0,"1 nonsynonymous","N64K",1
"lib2","SARS-CoV-2","AATAAAAGTAGACCGC",1,10.76,9.49,-1.34,0.15,2.63,1,0.01,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","AATAAAAGTTGCTACC",7,62.01,10.82,-0.01,0.03,2.94,1.07,0,">1 nonsynonymous","T140S F160Y",2
"lib2","SARS-CoV-2","AATAAAATAAATCGAA",7,78.64,10.67,-0.17,0.04,2.92,1.09,0,"1 nonsynonymous","Y39N",1
"lib2","SARS-CoV-2","AATAAAATAATCAGCG",7,0.73,NA,NA,NA,NA,NA,NA,"stop","C61T N157*",2
"lib2","SARS-CoV-2","AATAAAATACATCTCA",3,19.51,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6R L95R N151A N157Y",4
"lib2","SARS-CoV-2","AATAAAATAGTCCTAG",12,121.61,8.46,-2.38,0.14,1.6,1.13,0.01,">1 nonsynonymous","N13G Y39I Q176L",3
"lib2","SARS-CoV-2","AATAAAATATATCCCA",2,17.86,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","L183K",1
"lib2","SARS-CoV-2","AATAAAATATATCTTT",9,110.21,10.8,-0.04,0.03,2.94,1.07,0,"1 nonsynonymous","K94R",1
"lib2","SARS-CoV-2","AATAAAATATCTATCA",3,15.74,6,-4.84,2,3,1.37,0.02,">1 nonsynonymous","C61V Y93R G101D C158H Q168A",5
"lib2","SARS-CoV-2","AATAAAATCCAGTCAA",3,47.3,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A14Y G101V",2
"lib2","SARS-CoV-2","AATAAAATCGACAACG",3,72.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K F156P K198R",3
"lib2","SARS-CoV-2","AATAAAATCTGCACAT",4,37.07,6.15,-4.68,0.75,1.5,1.15,0.03,">1 nonsynonymous","G51R D75F I80V R127H",4
"lib2","SARS-CoV-2","AATAAAATGGACCCGA",4,9.89,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D90P T148P S164C",3
"lib2","SARS-CoV-2","AATAAAATGTACAAAA",5,30.54,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","AATAAAATTAAGCAAC",1,70.12,10.83,0,0.06,2.97,1.06,0,">1 nonsynonymous","P54S T201K",2
"lib2","SARS-CoV-2","AATAAAATTCAAGTAT",15,155.63,6.42,-4.42,0.41,1.5,1.18,0.01,">1 nonsynonymous","G83Q D112H",2
"lib2","SARS-CoV-2","AATAAAATTTACGTCA",1,16.56,9.07,-1.77,0.08,2.16,1.02,0.01,"1 nonsynonymous","P161V",1
"lib2","SARS-CoV-2","AATAAACAAAAACCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","T15V E141R P177*",3
"lib2","SARS-CoV-2","AATAAACAAAGATCGC",10,99.37,10.83,0,0.04,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAACAAATGCGAC",6,35.19,6,-4.84,2,1.5,1.17,0.03,"1 nonsynonymous","S69P",1
"lib2","SARS-CoV-2","AATAAACAACCGGCGT",6,22.61,6.89,-3.94,0.41,1.5,1.1,0.04,">1 nonsynonymous","K94V Y119L",2
"lib2","SARS-CoV-2","AATAAACAATCCAACA",7,88.99,10.89,0.06,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAACAATCCTGAA",9,43.77,6.09,-4.75,1.05,1.5,1.19,0.02,">1 nonsynonymous","C6W I88K R127L",3
"lib2","SARS-CoV-2","AATAAACACGAAACCA",13,287.21,10.78,-0.06,0.03,2.95,1.03,0,"1 nonsynonymous","A18G",1
"lib2","SARS-CoV-2","AATAAACACTCATTTA",9,2.56,NA,NA,NA,NA,NA,NA,"stop","E10Q C158*",2
"lib2","SARS-CoV-2","AATAAACAGAAGATCA",4,66.59,9.72,-1.12,0.06,2.2,1.04,0,">1 nonsynonymous","C49L D59E",2
"lib2","SARS-CoV-2","AATAAACATAAGTCCT",3,57.55,9.63,-1.21,0.15,1.66,1.11,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","AATAAACATCACCAAC",1,17.13,9.23,-1.61,0.31,1.5,1,0.04,">1 nonsynonymous","C61Y D68M",2
"lib2","SARS-CoV-2","AATAAACATTTGGAAC",13,127.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S36P D59T I80E K94H E154G",5
"lib2","SARS-CoV-2","AATAAACCAAAAACCT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I W106C P149S",3
"lib2","SARS-CoV-2","AATAAACCAGTAGAAA",13,73.56,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D34G P82F L95T",3
"lib2","SARS-CoV-2","AATAAACCGAGGAAAC",8,109.51,10.87,0.03,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAACCGATAAATT",1,10.91,10.77,-0.07,0.09,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAACCGCACTTAA",5,63.86,6,-4.84,2,3,1.2,0,">1 nonsynonymous","A81D K94N V103T G117V Q144K",5
"lib2","SARS-CoV-2","AATAAACCTAAACGTT",3,50.92,7.96,-2.88,0.49,1.5,1,0.07,">1 nonsynonymous","S36F S45P I80M T201Q",4
"lib2","SARS-CoV-2","AATAAACCTAAACTTG",10,0.16,NA,NA,NA,NA,NA,NA,"stop","Y93R T201*",2
"lib2","SARS-CoV-2","AATAAACCTCTGTATT",4,197.04,10.1,-0.73,0.03,2.95,1.02,0,">1 nonsynonymous","C6G T63G",2
"lib2","SARS-CoV-2","AATAAACCTCTTACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib2","SARS-CoV-2","AATAAACCTTAAGGAC",4,22.52,10.86,0.02,0.09,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAACGAAGGCGGC",4,72.74,10.15,-0.69,0.02,2.92,1.04,0,">1 nonsynonymous","S41L G174D",2
"lib2","SARS-CoV-2","AATAAACGACCACACT",2,48.45,10.84,0,0.04,2.96,1.05,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","AATAAACGATCACGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R D98H G146W",3
"lib2","SARS-CoV-2","AATAAACGCGGCAACC",7,32.18,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C61F N110G L122D C158R V173L",5
"lib2","SARS-CoV-2","AATAAACGGACCACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68T F99V E141D F156S G166W",5
"lib2","SARS-CoV-2","AATAAACGTCCCAGTG",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H Y39H T46K W106I C158N",5
"lib2","SARS-CoV-2","AATAAACTAACATTGC",4,0.02,NA,NA,NA,NA,NA,NA,"stop","E10N K26* L38P F44R C49P G83R L95P K132L",8
"lib2","SARS-CoV-2","AATAAACTAATATAAA",2,33.72,9.3,-1.54,0.07,2.84,1.04,0,">1 nonsynonymous","V32S K48Y F156K",3
"lib2","SARS-CoV-2","AATAAACTCAGTAGTG",5,93.42,9.48,-1.35,0.08,2.34,1.05,0,">1 nonsynonymous","K87A P96R",2
"lib2","SARS-CoV-2","AATAAAGACACCCTCC",13,46.11,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","P82S S139P C158G G172V",4
"lib2","SARS-CoV-2","AATAAAGACAGAACCG",4,119.16,10.78,-0.06,0.03,2.97,1.03,0,">1 nonsynonymous","A33F F160Y",2
"lib2","SARS-CoV-2","AATAAAGACGACATCT",2,76.05,10.61,-0.23,0.04,2.93,1.04,0,">1 nonsynonymous","V11I A33T D97T",3
"lib2","SARS-CoV-2","AATAAAGAGAAAACAC",2,85.01,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C31W G86F",2
"lib2","SARS-CoV-2","AATAAAGATGCACCGT",1,14.28,10.45,-0.39,0.06,2.98,1.01,0,">1 nonsynonymous","P54L V115S V173G",3
"lib2","SARS-CoV-2","AATAAAGCAGCCTAAC",10,254.57,10.06,-0.78,0.04,2.78,1.05,0,">1 nonsynonymous","D97W Y123A",2
"lib2","SARS-CoV-2","AATAAAGCATTACTAT",1,40,8.61,-2.22,0.09,3,1.09,0,">1 nonsynonymous","Y119F L125A N130A",3
"lib2","SARS-CoV-2","AATAAAGCCCCGGCCT",6,50.32,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D59Y E76I A105E K199Q",4
"lib2","SARS-CoV-2","AATAAAGCGCGCCTGT",7,0.58,NA,NA,NA,NA,NA,NA,"stop","K128* L162* V182F",3
"lib2","SARS-CoV-2","AATAAAGCTTCCCGGA",4,61.23,10.87,0.03,0.04,2.97,1.04,0,"1 nonsynonymous","S29D",1
"lib2","SARS-CoV-2","AATAAAGGACGACTCC",4,61.14,10.81,-0.03,0.03,3,1.01,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","AATAAAGGAGCTATTC",5,1.22,NA,NA,NA,NA,NA,NA,"stop","S45L G51* A89W D112P",4
"lib2","SARS-CoV-2","AATAAAGGATAGTACT",7,163.05,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y21G D112L N157Q",3
"lib2","SARS-CoV-2","AATAAAGGGCGACATG",8,0.9,NA,NA,NA,NA,NA,NA,"stop","R78A G86I L122* I138R",4
"lib2","SARS-CoV-2","AATAAAGGTACGATAT",5,1.95,NA,NA,NA,NA,NA,NA,"stop","T15L Y35* I104S E141*",4
"lib2","SARS-CoV-2","AATAAAGGTGCATGAT",2,23.8,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R27E T100G Y121N R136S N171K",5
"lib2","SARS-CoV-2","AATAAAGGTTGATGTG",1,33.93,8.9,-1.93,0.07,2.84,1.15,0,">1 nonsynonymous","R16F V37S K114L G166R",4
"lib2","SARS-CoV-2","AATAAAGGTTTAATGA",1,18.84,8.75,-2.09,0.16,2.68,1.29,0.01,">1 nonsynonymous","T85E N157Q",2
"lib2","SARS-CoV-2","AATAAAGTAGCTGTGA",3,15.71,9.96,-0.88,0.1,2.6,1.01,0.01,">1 nonsynonymous","Q79L A81Q A89P F99W",4
"lib2","SARS-CoV-2","AATAAAGTCTGAAAAC",2,3.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATAAATAAAAAAAAC",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D90Y W106R S139N",4
"lib2","SARS-CoV-2","AATAAATAAGCATAAA",6,2.97,NA,NA,NA,NA,NA,NA,"stop","N24L Y91*",2
"lib2","SARS-CoV-2","AATAAATAAGGAAATC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D97H G152A G155V Q163L Y178* T201N",6
"lib2","SARS-CoV-2","AATAAATACACTCATA",10,1.18,NA,NA,NA,NA,NA,NA,"stop","Y91* P96N G174I T201*",4
"lib2","SARS-CoV-2","AATAAATACATTGCAG",4,25.15,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y119F R136C Y143C T201N",4
"lib2","SARS-CoV-2","AATAAATACCATGACA",2,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y N109V E141F C158I",4
"lib2","SARS-CoV-2","AATAAATACGACGACA",4,68.11,6.55,-4.29,0.41,1.5,1.2,0.02,">1 nonsynonymous","W106L G166L",2
"lib2","SARS-CoV-2","AATAAATACGCAATTC",3,44.26,10.21,-0.62,0.07,2.91,1.09,0,">1 nonsynonymous","G9K S36R N110W",3
"lib2","SARS-CoV-2","AATAAATACTGTATTT",1,16.99,10.76,-0.07,0.08,2.91,1.12,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","AATAAATAGCAGCCTA",8,230.1,10.69,-0.15,0.03,2.92,1.07,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","AATAAATATAAGGGAA",7,76.76,10.57,-0.26,0.04,2.87,1.1,0,">1 nonsynonymous","L5K T15V",2
"lib2","SARS-CoV-2","AATAAATATACACGAA",2,31.79,10.78,-0.06,0.08,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAATATATGCCTA",1,9,10.78,-0.05,0.1,2.97,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAATATGTGTAAC",5,95.03,10.73,-0.11,0.03,2.94,1.08,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","AATAAATATTGAAGTA",8,70.59,10.67,-0.17,0.03,2.92,1.09,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AATAAATCATCCCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","K48G P54* G83R",3
"lib2","SARS-CoV-2","AATAAATCCAAAAATT",1,29.22,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K26R A105C L125S P133V Y175M",5
"lib2","SARS-CoV-2","AATAAATCCGAAACTT",3,0,NA,NA,NA,NA,NA,NA,"stop","N13T V71A W106C Q163*",4
"lib2","SARS-CoV-2","AATAAATCTTCTCCAA",4,21.07,9.74,-1.1,0.2,1.81,1.05,0.02,">1 nonsynonymous","A33T P54A L60G G83T S147A",5
"lib2","SARS-CoV-2","AATAAATGAAACATCA",10,56.65,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y39S Y93N N130Y G172S",4
"lib2","SARS-CoV-2","AATAAATGAGTCATGT",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T L57M T100K N107C S113T F134I G152N",7
"lib2","SARS-CoV-2","AATAAATGCGTCTAAT",2,12.22,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","F12L L95A K114S Q176K",4
"lib2","SARS-CoV-2","AATAAATGGAGCCGCT",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G I80T",2
"lib2","SARS-CoV-2","AATAAATGTAGAAAAA",1,1.08,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AATAAATTACTACACC",1,5.3,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","V20L Y123M E154N",3
"lib2","SARS-CoV-2","AATAAATTATACTATG",4,23.82,6.25,-4.59,0.93,1.5,1.13,0.05,">1 nonsynonymous","K56T T63H A81K G101I E135V N151P N171M",7
"lib2","SARS-CoV-2","AATAAATTATTTATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R16M A33* F156H",3
"lib2","SARS-CoV-2","AATAAATTGCAATGAC",2,33.25,10.41,-0.42,0.1,2.82,1.11,0.01,">1 nonsynonymous","G9D N13C",2
"lib2","SARS-CoV-2","AATAAATTGCCCCGAA",3,28.65,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51T V71A G86C",3
"lib2","SARS-CoV-2","AATAAATTGGGGAATG",5,26.97,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y35D V65H K94L N110S E141G",5
"lib2","SARS-CoV-2","AATAAATTTAGAGCGT",4,76.85,10.07,-0.77,0.06,2.71,1.05,0,">1 nonsynonymous","V11M Y35V W106R",3
"lib2","SARS-CoV-2","AATAACAAAAATCCAT",3,12.85,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C61M D90I C102W Q168L",4
"lib2","SARS-CoV-2","AATAACAAAAGCCGCG",7,138,9.91,-0.93,0.06,2.75,1.05,0,">1 nonsynonymous","V37H D97F V173P",3
"lib2","SARS-CoV-2","AATAACAAAAGGAATA",3,18.58,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N4K Y50D N64T T85S N107A Y165L",6
"lib2","SARS-CoV-2","AATAACAACATATAAA",4,93.49,10.92,0.08,0.1,2.88,1.05,0,">1 nonsynonymous","L5E F160S",2
"lib2","SARS-CoV-2","AATAACAAGCGGGTGT",7,109.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5V A33C K87S A105S F167L",5
"lib2","SARS-CoV-2","AATAACAAGGCATAAA",10,155.19,10.72,-0.12,0.04,2.93,1.07,0,"1 nonsynonymous","G152H",1
"lib2","SARS-CoV-2","AATAACAATAAAGTGG",10,168.47,10.68,-0.15,0.03,2.92,1.08,0,">1 nonsynonymous","S41E E141G",2
"lib2","SARS-CoV-2","AATAACAATCGATGCA",3,31.95,9.57,-1.27,0.09,2.13,1.07,0.01,">1 nonsynonymous","W106R N151C",2
"lib2","SARS-CoV-2","AATAACACACAAAGGG",3,8.84,6,-4.84,2,1.5,1.03,0.02,">1 nonsynonymous","Y21I K56R F62S E141V",4
"lib2","SARS-CoV-2","AATAACACAGACACCG",2,5.59,9.42,-1.41,0.33,1.5,1.03,0.03,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","AATAACACCGGAAAAA",6,431.15,10.38,-0.46,0.03,2.98,1.03,0,"1 nonsynonymous","Y35P",1
"lib2","SARS-CoV-2","AATAACACTTAACACT",12,60.27,6.12,-4.71,0.83,1.5,1.18,0.02,">1 nonsynonymous","G101S K198D",2
"lib2","SARS-CoV-2","AATAACAGAAAGGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K G86K D112S",3
"lib2","SARS-CoV-2","AATAACAGAACGGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41V R136K G155N Y178*",4
"lib2","SARS-CoV-2","AATAACAGATGAACCT",2,48.52,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A89R Q176A",2
"lib2","SARS-CoV-2","AATAACAGGAAACAAT",6,36.24,8.51,-2.33,0.19,2.03,1.05,0.02,">1 nonsynonymous","D34N F99L G166S",3
"lib2","SARS-CoV-2","AATAACAGTTTGTGTG",2,36.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48M A81P W106E",3
"lib2","SARS-CoV-2","AATAACATAGGAAGTC",4,11.01,10.1,-0.73,0.13,1.88,1.24,0.01,">1 nonsynonymous","N64F A105V V173M",3
"lib2","SARS-CoV-2","AATAACATATATATAA",7,16.97,8.29,-2.54,0.41,1.66,1.15,0.05,">1 nonsynonymous","A42H K48V A81S N107S G166V",5
"lib2","SARS-CoV-2","AATAACATCACAAGAC",5,92.47,10.82,-0.01,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAACATGAATTCCA",12,102.12,9.32,-1.52,0.16,1.5,1.09,0.01,">1 nonsynonymous","N24W F134R",2
"lib2","SARS-CoV-2","AATAACATGTATATAG",15,20.87,6.73,-4.11,0.25,2.06,1.15,0.01,">1 nonsynonymous","T15N A33M K114S R127I",4
"lib2","SARS-CoV-2","AATAACCAAAAAATCA",7,0.07,NA,NA,NA,NA,NA,NA,"stop","K114M Y123L K128* I142Y G152S",5
"lib2","SARS-CoV-2","AATAACCAATCCTATG",6,50.98,6.79,-4.04,0.27,1.5,1.09,0.01,">1 nonsynonymous","N64T Y121A E154L G166L T193Y V194G",6
"lib2","SARS-CoV-2","AATAACCAATGAACTA",6,46.27,10.76,-0.08,0.07,2.84,1.18,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","AATAACCACTAGTAAG",15,170.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12S L60T Y121C Y175V",4
"lib2","SARS-CoV-2","AATAACCAGTACACAC",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K Y119T",2
"lib2","SARS-CoV-2","AATAACCCAACAAATT",8,61.57,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7C S36Y Y143K",3
"lib2","SARS-CoV-2","AATAACCCAAGGCCAA",11,93.82,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6D Y21M A89I",3
"lib2","SARS-CoV-2","AATAACCCAATGTCCC",7,41.19,10.72,-0.11,0.06,2.93,1.07,0,">1 nonsynonymous","K56S N120E",2
"lib2","SARS-CoV-2","AATAACCCCGCCCTGT",3,25.13,6,-4.84,0.56,2.22,1.08,0,">1 nonsynonymous","G116K E135P",2
"lib2","SARS-CoV-2","AATAACCCTATGGTCG",2,49.79,10.74,-0.09,0.06,2.92,1.1,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","AATAACCCTGCTAAGC",4,55.26,10.74,-0.1,0.03,2.97,1.06,0,"1 nonsynonymous","A14K",1
"lib2","SARS-CoV-2","AATAACCCTTCCATTA",5,55.23,10.82,-0.02,0.07,2.82,1.18,0,"1 nonsynonymous","S164H",1
"lib2","SARS-CoV-2","AATAACCGAATTGGAA",6,37.4,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","D90I D98E F99V Y121L",4
"lib2","SARS-CoV-2","AATAACCGATAGTGAA",8,409.37,10.12,-0.72,0.03,2.84,1.03,0,">1 nonsynonymous","A89P D90R P191R A192S",4
"lib2","SARS-CoV-2","AATAACCGCACGACCA",3,13.83,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","D34R S41H K56L P96T",4
"lib2","SARS-CoV-2","AATAACCGGCTCCTAG",6,218.41,9.51,-1.33,0.06,2.79,1.08,0,">1 nonsynonymous","D98S Q144P G174R",3
"lib2","SARS-CoV-2","AATAACCTATAATTTA",11,102.99,8.39,-2.44,0.08,2.5,1.08,0,">1 nonsynonymous","K87R P161M",2
"lib2","SARS-CoV-2","AATAACCTGCTTGAAT",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T F12L I88P",3
"lib2","SARS-CoV-2","AATAACCTGTACTATT",2,51.3,10.78,-0.06,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAACCTTATTCTTG",3,28.38,10.71,-0.13,0.04,3,1.02,0,"1 nonsynonymous","T140Y",1
"lib2","SARS-CoV-2","AATAACGAAGCAGAGA",5,37.17,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","W106N N118K N171W",3
"lib2","SARS-CoV-2","AATAACGACGAACTCG",1,17.98,9.65,-1.19,0.16,2.1,1.07,0.01,">1 nonsynonymous","P7S A81E K128F P149Q",4
"lib2","SARS-CoV-2","AATAACGATAACACTA",5,77.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25F C31F L95P Y123G",4
"lib2","SARS-CoV-2","AATAACGCATATAGAA",13,2.19,NA,NA,NA,NA,NA,NA,"stop","S19L L122*",2
"lib2","SARS-CoV-2","AATAACGCTTAGAAGG",2,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G A14K P54M G83V",4
"lib2","SARS-CoV-2","AATAACGGTGCCAATA",2,12.44,10.76,-0.08,0.08,2.89,1.12,0,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","AATAACGTCCCATGGA",1,7.05,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATAACGTTAAACTCC",2,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S L38R Y66S G172L K198A",5
"lib2","SARS-CoV-2","AATAACTAAATAATGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N4A N40* K94G",3
"lib2","SARS-CoV-2","AATAACTAAGAATTCT",3,71.85,9.65,-1.19,0.12,2.22,1.09,0.01,">1 nonsynonymous","C6H E10H T46M",3
"lib2","SARS-CoV-2","AATAACTAATACGGTA",2,119.38,10.89,0.05,0.06,2.86,1.16,0,"1 nonsynonymous","L122N",1
"lib2","SARS-CoV-2","AATAACTAATATAGGA",1,40.36,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","S19L C158V K198S",3
"lib2","SARS-CoV-2","AATAACTAATTGAAAA",2,31.09,8.86,-1.97,0.11,2.76,1.19,0.01,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","AATAACTACCAACCCA",4,67.92,8.69,-2.15,0.09,2.78,1.12,0,">1 nonsynonymous","D90I Y119H",2
"lib2","SARS-CoV-2","AATAACTACCTAGCAA",7,6.06,NA,NA,NA,NA,NA,NA,"stop","N4M A81*",2
"lib2","SARS-CoV-2","AATAACTACCTGAATC",12,225.59,8.87,-1.97,0.08,2.08,1.11,0,">1 nonsynonymous","T3C L38V T140L T170Q S200D",5
"lib2","SARS-CoV-2","AATAACTGACAGATAC",2,43.12,8.24,-2.6,0.34,1.5,1,0.04,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","AATAACTGAGACATAA",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AATAACTTGATAGCTA",3,61.34,6,-4.84,2,3,1.23,0,">1 nonsynonymous","R27Q V77H P82Y",3
"lib2","SARS-CoV-2","AATAACTTGTTCTACA",7,21.34,6.15,-4.69,0.54,1.5,1.1,0.01,">1 nonsynonymous","L60W P82I E135M",3
"lib2","SARS-CoV-2","AATAACTTTTTGATCA",8,36.92,9.62,-1.22,0.11,2.36,1.04,0.01,">1 nonsynonymous","S41Y L57H G152T",3
"lib2","SARS-CoV-2","AATAAGAAACCAAATT",1,7.81,10.85,0.01,0.08,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAGAAACTAACTT",1,53.15,6,-4.84,2,3,1.2,0,">1 nonsynonymous","V65E S108L",2
"lib2","SARS-CoV-2","AATAAGAACGGTTTGC",7,55.03,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1I N92L Y119L",3
"lib2","SARS-CoV-2","AATAAGAACTAATTAT",3,19.19,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G86R Y121G E154P V180S",4
"lib2","SARS-CoV-2","AATAAGAACTAGCCAA",7,26.53,9.23,-1.6,0.13,1.77,1.16,0.01,">1 nonsynonymous","K94Y T140L",2
"lib2","SARS-CoV-2","AATAAGAAGACCGGCC",7,1.33,NA,NA,NA,NA,NA,NA,"stop","N4P E10L W23* S113K G117S",5
"lib2","SARS-CoV-2","AATAAGAAGTAACACC",5,7.58,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T3L G51T E141Y G166F",4
"lib2","SARS-CoV-2","AATAAGAAGTACTATA",8,68.02,7.83,-3,0.26,1.5,1.13,0.03,">1 nonsynonymous","C102Y G152N",2
"lib2","SARS-CoV-2","AATAAGAAGTCAAACT",4,74.8,7.88,-2.96,0.14,1.72,1.12,0.01,">1 nonsynonymous","S41N C49A F126N S200G",4
"lib2","SARS-CoV-2","AATAAGACAAACCACA",2,5.56,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D68T E76Y P96R D112N P149Y T201I",6
"lib2","SARS-CoV-2","AATAAGACAGTTGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","D34A T55* Y93V W106L V181W",5
"lib2","SARS-CoV-2","AATAAGACATGCTGTC",8,2.05,NA,NA,NA,NA,NA,NA,"stop","E10S T15R R27* P161G",4
"lib2","SARS-CoV-2","AATAAGACATTCTGAA",17,0.85,NA,NA,NA,NA,NA,NA,"stop","I2A S41Y K48H Q163* F185V",5
"lib2","SARS-CoV-2","AATAAGACCTTTGGGT",5,97.76,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D34S G117A G146E",3
"lib2","SARS-CoV-2","AATAAGACTGCGTCCA",4,128.02,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35C T85M C150L R179S",4
"lib2","SARS-CoV-2","AATAAGACTTCGGTGG",5,12.42,10.7,-0.14,0.09,2.86,1.12,0,"1 nonsynonymous","P54G",1
"lib2","SARS-CoV-2","AATAAGAGAAAAGCCT",5,16.38,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A105V D112K",2
"lib2","SARS-CoV-2","AATAAGAGAAATTTCT",3,16.54,6.02,-4.82,1.62,3,1.19,0.01,">1 nonsynonymous","C49V T63L K114C R127S",4
"lib2","SARS-CoV-2","AATAAGAGGCGGAAAT",3,38.73,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I72S K128F",2
"lib2","SARS-CoV-2","AATAAGATAACACTTT",1,6.58,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","D68E D90F F99H Y123T F160C",5
"lib2","SARS-CoV-2","AATAAGATGAATAGTT",3,16.62,9.78,-1.05,0.39,1.91,1.13,0.08,">1 nonsynonymous","A89D L122G G174V",3
"lib2","SARS-CoV-2","AATAAGATGGTATCAA",13,128.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F70I F99S V180L",3
"lib2","SARS-CoV-2","AATAAGCAAAAAAACC",4,44.19,10.85,0.01,0.06,2.92,1.11,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","AATAAGCAAATATTTC",1,0.43,NA,NA,NA,NA,NA,NA,"stop","G101* N120*",2
"lib2","SARS-CoV-2","AATAAGCAATGAAAAA",1,44.89,10.85,0.01,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAGCACCGTTGTT",6,53.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9D V65S D98Q N120Y E141W C150S",6
"lib2","SARS-CoV-2","AATAAGCATTACTTTG",1,96.28,10.3,-0.54,0.05,2.93,1.06,0,"1 nonsynonymous","P169M",1
"lib2","SARS-CoV-2","AATAAGCCAATCTAAG",1,82.13,10.18,-0.66,0.07,2.76,1,0,">1 nonsynonymous","V32S S53N L60N D98E K132N",5
"lib2","SARS-CoV-2","AATAAGCCATTGAAAC",7,90.62,10.75,-0.08,0.04,2.91,1.11,0,"1 nonsynonymous","N4E",1
"lib2","SARS-CoV-2","AATAAGCCGAACGAAC",13,147.38,10.82,-0.02,0.05,2.92,1.09,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","AATAAGCGGTACAGTT",2,83.27,10.83,0,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAAGCTATCGCAAA",12,2.17,NA,NA,NA,NA,NA,NA,"stop","L38P N64T T140I T201*",4
"lib2","SARS-CoV-2","AATAAGGACACTATGA",3,15.5,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","P96Q Y175I",2
"lib2","SARS-CoV-2","AATAAGGAGAACCAGC",1,49.93,6.35,-4.49,0.73,1.5,1.23,0.04,">1 nonsynonymous","N40D G86R",2
"lib2","SARS-CoV-2","AATAAGGAGCATTAAA",2,63.1,9.9,-0.93,0.08,2.2,1.06,0,"1 nonsynonymous","Q84W",1
"lib2","SARS-CoV-2","AATAAGGCGAAACTTC",4,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S P149R",2
"lib2","SARS-CoV-2","AATAAGGCTTGGACTT",4,30.92,9.43,-1.4,0.11,1.9,1.1,0,">1 nonsynonymous","I28R T201I",2
"lib2","SARS-CoV-2","AATAAGGGAAATTTCC",7,65.73,8.62,-2.22,0.1,2.52,1.04,0,">1 nonsynonymous","A18N Y165V S200L",3
"lib2","SARS-CoV-2","AATAAGGGAGGCTCCT",8,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L N107S",2
"lib2","SARS-CoV-2","AATAAGGGATTATCTG",3,17.26,10.73,-0.11,0.08,2.91,1.05,0,">1 nonsynonymous","G83F A105S I138L",3
"lib2","SARS-CoV-2","AATAAGGTGTAGCTAA",6,4.56,NA,NA,NA,NA,NA,NA,"stop","S43V N92L Y121* N130W Q144L",5
"lib2","SARS-CoV-2","AATAAGGTGTTACGCC",7,58.49,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26S Y123T L131W",3
"lib2","SARS-CoV-2","AATAAGTAAGCTAAAA",13,116.07,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S36R P54G Y91G D112I",4
"lib2","SARS-CoV-2","AATAAGTATACTTTTA",7,109.26,6,-4.84,2,3,1.23,0,">1 nonsynonymous","F70Y D137I V153M F156S",4
"lib2","SARS-CoV-2","AATAAGTATTAAGAAG",21,307.31,8.79,-2.05,0.19,1.5,1,0.02,">1 nonsynonymous","Y39V V77T N110L P161A",4
"lib2","SARS-CoV-2","AATAAGTATTATATCT",6,39.1,9.05,-1.79,0.13,1.52,1.03,0.01,">1 nonsynonymous","F12Y R136S",2
"lib2","SARS-CoV-2","AATAAGTCCAGATACG",2,5.56,NA,NA,NA,NA,NA,0.21,"1 nonsynonymous","I80G",1
"lib2","SARS-CoV-2","AATAAGTCCTTAGGAC",13,88.49,9.24,-1.59,0.06,1.87,1.03,0,">1 nonsynonymous","T55Y D90L E135K",3
"lib2","SARS-CoV-2","AATAAGTCGCAGTAAG",8,58.11,9.9,-0.94,0.09,2.28,1.03,0,">1 nonsynonymous","K26W S41P",2
"lib2","SARS-CoV-2","AATAAGTCGCGACGGG",9,112.33,10.7,-0.14,0.04,2.87,1.15,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","AATAAGTCGTTTCGAC",5,117.75,10.76,-0.08,0.05,2.91,1.09,0,">1 nonsynonymous","C61E E141S P197T",3
"lib2","SARS-CoV-2","AATAAGTGTATTCAAG",13,3.91,NA,NA,NA,NA,NA,NA,"stop","I72L P96* R136F G146R",4
"lib2","SARS-CoV-2","AATAAGTTAATCCTAT",4,64.2,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V20L L95G G117E",3
"lib2","SARS-CoV-2","AATAAGTTATTTAATA",3,67.94,10.18,-0.65,0.04,2.81,1.07,0,">1 nonsynonymous","V37W Q79K",2
"lib2","SARS-CoV-2","AATAAGTTCTGTGGCG",3,18.49,6.2,-4.64,0.76,1.5,1.17,0.04,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","AATAAGTTGTAACCTA",6,29.15,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L5I P96L I104L C158Y",4
"lib2","SARS-CoV-2","AATAAGTTGTTAATCT",1,27.53,10.85,0.01,0.1,2.81,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATAAAGCTCAAC",8,150.88,8.43,-2.41,0.11,2.68,1.05,0.01,">1 nonsynonymous","D98F Y119A G174K",3
"lib2","SARS-CoV-2","AATAATAAATGAGAAT",4,50.71,10.79,-0.04,0.05,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATAACAATTACG",13,575.59,10.49,-0.35,0.04,2.95,1.02,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AATAATAACGTCTCTT",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81Y N92W I104R E135M",4
"lib2","SARS-CoV-2","AATAATAAGACTAAGT",1,0.86,NA,NA,NA,NA,NA,NA,"stop","Y119D S139P P149*",3
"lib2","SARS-CoV-2","AATAATAAGATAGATG",1,18.5,8.87,-1.96,0.2,2.15,1.07,0.01,"1 nonsynonymous","P161M",1
"lib2","SARS-CoV-2","AATAATAAGGACATTT",1,11.53,10.87,0.03,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATAATAAACCAA",11,123.42,10.52,-0.31,0.03,2.94,1.06,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","AATAATAATACGGCCT",5,27.24,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T3W G83R D97L Y159G",4
"lib2","SARS-CoV-2","AATAATAATAGTTACA",4,13.78,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I72G Y93V T100K W106S",4
"lib2","SARS-CoV-2","AATAATAATCCCACCA",3,26.25,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K114L Q168P",2
"lib2","SARS-CoV-2","AATAATAATGAAACAA",2,45.16,8.2,-2.64,0.3,1.66,1.06,0.04,">1 nonsynonymous","K26E Y175L",2
"lib2","SARS-CoV-2","AATAATAATGAGTACG",2,47.6,9.6,-1.23,0.1,2.65,1.11,0,">1 nonsynonymous","Q84K G155F",2
"lib2","SARS-CoV-2","AATAATAATTCAAGGC",9,57.53,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T85Y L95D T201I",3
"lib2","SARS-CoV-2","AATAATACAAAAAGGG",1,143.74,10.22,-0.62,0.03,2.94,1.05,0,">1 nonsynonymous","L95M T170S",2
"lib2","SARS-CoV-2","AATAATACAGACAATG",4,51.88,9.43,-1.41,0.04,2.91,1.05,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","AATAATACCAAAATGA",5,22.44,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","N4Y F8Y W23C F70L L131I F167Q",6
"lib2","SARS-CoV-2","AATAATACCAACTACT",3,13.52,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","S43P G86C W106N P149G",4
"lib2","SARS-CoV-2","AATAATACGGAAAAAT",9,97.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R78Q A105L F134L I142V T148A",5
"lib2","SARS-CoV-2","AATAATACGTTCGTCA",3,8.4,7.58,-3.25,0.33,1.92,1.18,0.03,">1 nonsynonymous","I2N K48R R73F",3
"lib2","SARS-CoV-2","AATAATACTGCCGAAC",4,35.22,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L95Q I104S R124G I138S V153F",5
"lib2","SARS-CoV-2","AATAATACTGGACAAA",1,3.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","AATAATAGAAAGAGAG",2,12.41,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K87R Y93I Y175S",3
"lib2","SARS-CoV-2","AATAATAGAAATAGGT",5,49.29,10.89,0.05,0.07,2.98,1.03,0,"1 nonsynonymous","S200G",1
"lib2","SARS-CoV-2","AATAATAGCGGTTGAA",1,4.26,NA,NA,NA,NA,NA,NA,"stop","T85D N130V A145* V180L",4
"lib2","SARS-CoV-2","AATAATAGTGAAGATA",7,98.39,9.81,-1.02,0.06,1.99,1.06,0,"1 nonsynonymous","L38K",1
"lib2","SARS-CoV-2","AATAATAGTGAATGCT",5,45.3,6.21,-4.62,0.34,2.27,1.16,0,">1 nonsynonymous","Q84K C150S",2
"lib2","SARS-CoV-2","AATAATATAAATGCCC",4,168.56,10.32,-0.52,0.03,2.94,1.03,0,"1 nonsynonymous","K26W",1
"lib2","SARS-CoV-2","AATAATATAACGGTAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H K56M L131V G146H",4
"lib2","SARS-CoV-2","AATAATATCAAATAAC",2,10.55,8.76,-2.08,0.09,3,1,0,">1 nonsynonymous","S43P L60H Y119L",3
"lib2","SARS-CoV-2","AATAATATCTCAGTGG",20,160.55,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G9S C31Y G86F R127F I138C",5
"lib2","SARS-CoV-2","AATAATATGCTTTGTC",6,21.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6E D75W D90Y K128L Q144P T201R",6
"lib2","SARS-CoV-2","AATAATATTTACGCAT",3,63.6,10.09,-0.75,0.09,2.15,1,0,">1 nonsynonymous","G9Q I28N T46R L122K",4
"lib2","SARS-CoV-2","AATAATCAATTGATAG",1,5.96,10.43,-0.41,0.09,2.95,1,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","AATAATCACAAAGACG",5,88.25,10.76,-0.07,0.04,2.92,1.09,0,"1 nonsynonymous","N120G",1
"lib2","SARS-CoV-2","AATAATCACAATAGTA",1,6.55,8.98,-1.85,0.47,1.5,1,0.05,">1 nonsynonymous","N13Y C61N N92L",3
"lib2","SARS-CoV-2","AATAATCACCTTAAAA",1,8.79,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","Y91P S113I L125P",3
"lib2","SARS-CoV-2","AATAATCACCTTACTA",3,55.71,10.7,-0.13,0.06,2.88,1.12,0,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","AATAATCACTGCATAT",18,108.55,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6L D68F L122S",3
"lib2","SARS-CoV-2","AATAATCAGACGCAAT",1,40.05,9.69,-1.14,0.11,2.09,1.11,0,">1 nonsynonymous","D98H Y121N E154R",3
"lib2","SARS-CoV-2","AATAATCAGATATCAG",3,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127G Q168S G172L",3
"lib2","SARS-CoV-2","AATAATCATAGAATCA",5,89.56,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60Y F167G",2
"lib2","SARS-CoV-2","AATAATCCAAAATACC",2,19.52,9.89,-0.95,0.08,2.53,1.05,0,">1 nonsynonymous","N13F Y39C",2
"lib2","SARS-CoV-2","AATAATCCACAATCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* T55H S69* K94A A105P R127W Y175E",7
"lib2","SARS-CoV-2","AATAATCGAATATTGG",6,11.6,10.24,-0.59,0.09,2.86,1.01,0,"1 nonsynonymous","V181C",1
"lib2","SARS-CoV-2","AATAATCGATAAATGC",2,30.62,9.14,-1.7,0.07,2.88,1.1,0,">1 nonsynonymous","L60K G166Q",2
"lib2","SARS-CoV-2","AATAATCTATACACTT",3,17.04,10.26,-0.58,0.05,2.93,1,0,">1 nonsynonymous","G9L A18S L188F",3
"lib2","SARS-CoV-2","AATAATCTATCTTAAT",3,54.5,9.98,-0.85,0.07,2.86,1.07,0,">1 nonsynonymous","D59E G116C",2
"lib2","SARS-CoV-2","AATAATCTGTTCTATA",5,9.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19R T100E S147F F156P",4
"lib2","SARS-CoV-2","AATAATCTTAAGACCA",6,2.18,NA,NA,NA,NA,NA,NA,"stop","Y50Q E186* A192K",3
"lib2","SARS-CoV-2","AATAATCTTATTGTAC",3,40.54,10.87,0.03,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATGAAAAATTTT",11,13.67,NA,NA,NA,NA,NA,NA,"stop","V32K Y39* N130H",3
"lib2","SARS-CoV-2","AATAATGAAATAAATA",4,26.23,9.17,-1.66,0.19,1.56,1.08,0.02,">1 nonsynonymous","S45A L162R",2
"lib2","SARS-CoV-2","AATAATGACAATTGGC",3,11.72,11.03,0.19,0.1,2.81,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATGACACTGGCA",1,15.35,8.03,-2.81,0.17,2.4,1.09,0.01,">1 nonsynonymous","W106R Y119S",2
"lib2","SARS-CoV-2","AATAATGACCCGAGCT",7,84.84,10.25,-0.59,0.05,2.7,1.11,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","AATAATGACCCTCATG",4,105.26,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5C R27S P169M Y175T",4
"lib2","SARS-CoV-2","AATAATGACTACTGTA",6,43.09,7.25,-3.59,0.31,1.5,1.18,0.02,">1 nonsynonymous","W106Q G155Y",2
"lib2","SARS-CoV-2","AATAATGAGGGGTGCA",2,20.85,9.79,-1.04,0.17,2.32,1.01,0.02,">1 nonsynonymous","V52K P149T",2
"lib2","SARS-CoV-2","AATAATGCAGACGATA",5,42.9,6.09,-4.75,1.12,1.5,1.18,0.03,">1 nonsynonymous","V11L D98G Y165R",3
"lib2","SARS-CoV-2","AATAATGCCAAGTTTT",4,0,NA,NA,NA,NA,NA,NA,"stop","L5W V37* K48I D137V",4
"lib2","SARS-CoV-2","AATAATGCCCTTCAAA",4,62.71,10.88,0.05,0.06,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AATAATGCCCTTTTAT",2,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L Y39Q D68M K94S V103S R136V F185N",7
"lib2","SARS-CoV-2","AATAATGGACATGCTT",9,174.5,10.73,-0.11,0.03,2.89,1.09,0,">1 nonsynonymous","C61M Q84G",2
"lib2","SARS-CoV-2","AATAATGGTAAATAAA",3,29.5,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","D68M V71I N107A P149M F160I",5
"lib2","SARS-CoV-2","AATAATGTAATTTATC",24,237.63,10.11,-0.72,0.06,2.47,1.08,0,">1 nonsynonymous","T46M Y123T",2
"lib2","SARS-CoV-2","AATAATGTAGGTAGCT",3,17.07,10.91,0.08,0.07,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATGTATCGGTAC",1,13.02,9.83,-1.01,0.11,2.19,1.11,0.01,">1 nonsynonymous","S29G A42C R136L",3
"lib2","SARS-CoV-2","AATAATGTGGCGGGTT",7,154.17,10.45,-0.38,0.03,2.88,1.06,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","AATAATGTGTGCTCAA",3,24.9,6,-4.84,0.89,3,1.09,0.01,">1 nonsynonymous","A105Q F156I Y165N",3
"lib2","SARS-CoV-2","AATAATGTTATACCAA",4,22.75,6.16,-4.68,1.22,1.5,1.34,0.05,">1 nonsynonymous","A42S K48F Y165S",3
"lib2","SARS-CoV-2","AATAATTAAAATACAG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G A33S N58L C150S V181G",5
"lib2","SARS-CoV-2","AATAATTAACAACACG",6,66.2,6.18,-4.66,1.16,1.5,1.28,0.05,">1 nonsynonymous","N4G W23T T63L G116N K132W",5
"lib2","SARS-CoV-2","AATAATTAACCAGCTA",20,65.85,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12I I104K T170R",3
"lib2","SARS-CoV-2","AATAATTAATCTCCGA",2,47.93,10.84,0,0.09,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAATTACATAACTA",2,9.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P96T D112G",2
"lib2","SARS-CoV-2","AATAATTAGCTAGTTA",2,11.88,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","F44Y K48E G101D",3
"lib2","SARS-CoV-2","AATAATTAGTATAGTA",3,47.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N92M I138R",2
"lib2","SARS-CoV-2","AATAATTATGTACAGT",7,0,NA,NA,NA,NA,NA,NA,"stop","P82T K87S L95A K114P S200*",5
"lib2","SARS-CoV-2","AATAATTATTTTTAAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","AATAATTCAAACAAAT",10,176.42,8.35,-2.49,0.12,2.04,1.07,0.01,">1 nonsynonymous","S108M G174K",2
"lib2","SARS-CoV-2","AATAATTCAGTTTTGA",2,19.64,10.52,-0.31,0.09,2.8,1.19,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","AATAATTGGACGAACA",3,10.77,6.1,-4.73,0.93,3,1.08,0.03,">1 nonsynonymous","A81Q D90Y Y121T P169R",4
"lib2","SARS-CoV-2","AATAATTTCGATTCTT",1,74.91,8.41,-2.42,0.13,3,1.06,0.01,">1 nonsynonymous","I2R K87S L122W T170E",4
"lib2","SARS-CoV-2","AATAATTTGGCCAAGT",5,76.3,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C6L F12V N24A I142V Q168S Q176C",6
"lib2","SARS-CoV-2","AATACAAAAAAAATAA",2,73.54,6.12,-4.71,1.35,1.5,1.35,0.06,">1 nonsynonymous","G83Y Y91A P177S",3
"lib2","SARS-CoV-2","AATACAAAAAATAGCG",4,21.21,10.78,-0.06,0.07,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACAAAAAGCTTAC",4,39.24,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","V11P F17K F167G",3
"lib2","SARS-CoV-2","AATACAAAAAGTCCGA",3,28.92,9.24,-1.59,0.06,2.81,1.18,0,">1 nonsynonymous","Y119I G166M H189R",3
"lib2","SARS-CoV-2","AATACAAAAATACTAC",6,74.11,9.27,-1.57,0.08,1.69,1.06,0,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","AATACAAAAATGCCTT",6,95.95,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K94Y S113Y A192G",3
"lib2","SARS-CoV-2","AATACAAACTTCCTGC",5,22.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5G D112F Y119L I142H P197L",5
"lib2","SARS-CoV-2","AATACAAAGACCAGTG",2,20.35,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","C6I D34L K87G P161Q",4
"lib2","SARS-CoV-2","AATACAAAGACTAAGG",13,155.2,10.76,-0.07,0.04,2.92,1.1,0,">1 nonsynonymous","T140A F160Y",2
"lib2","SARS-CoV-2","AATACAAAGTTAACTA",6,56.3,9.22,-1.61,0.13,1.67,1.04,0.01,">1 nonsynonymous","E10M D59Q P133R",3
"lib2","SARS-CoV-2","AATACAAATATCAATG",5,46.12,9.85,-0.99,0.13,2.38,1.1,0.01,">1 nonsynonymous","S36D A81R V115F A145S",4
"lib2","SARS-CoV-2","AATACAAATGTCTCTT",7,35.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4H F44G D97S R127L",4
"lib2","SARS-CoV-2","AATACAACAAGTAATC",1,0.96,NA,NA,NA,NA,NA,NA,"stop","F134* Y159L",2
"lib2","SARS-CoV-2","AATACAACATAAAAAA",15,3.2,NA,NA,NA,NA,NA,NA,"stop","L5* S45F I88K V181R T201Q",5
"lib2","SARS-CoV-2","AATACAACGATTTAGT",1,13.63,10.42,-0.42,0.07,2.9,1.03,0,">1 nonsynonymous","A42V Q84H T201N",3
"lib2","SARS-CoV-2","AATACAACGGATAGCC",1,39.67,9.93,-0.9,0.11,2.24,1.06,0,">1 nonsynonymous","T63L S139L",2
"lib2","SARS-CoV-2","AATACAACTATACTTC",2,2.16,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib2","SARS-CoV-2","AATACAACTTGCGATA",5,74.98,10.51,-0.32,0.05,3,1.01,0,">1 nonsynonymous","L60K D75M",2
"lib2","SARS-CoV-2","AATACAAGATAATCCA",4,2.99,NA,NA,NA,NA,NA,NA,"stop","L5Q S43*",2
"lib2","SARS-CoV-2","AATACAAGCCTACCAA",1,9.36,6.07,-4.77,0.85,3,1.05,0.01,">1 nonsynonymous","S43C P54H N58H C102S I138T",5
"lib2","SARS-CoV-2","AATACAAGGTCCTTGA",9,207.45,8.66,-2.18,0.08,2.8,1.09,0,"1 nonsynonymous","S113R",1
"lib2","SARS-CoV-2","AATACAAGGTCTCCAT",13,187.4,10.08,-0.76,0.05,2.76,1.01,0,"1 nonsynonymous","I88L",1
"lib2","SARS-CoV-2","AATACAAGTGCACAGC",20,280.59,10.84,0,0.04,2.89,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACAAGTTACCTTC",9,75.47,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D90Y W106D",2
"lib2","SARS-CoV-2","AATACAAGTTTCCGCC",6,122.39,10.52,-0.32,0.04,2.97,1.02,0,">1 nonsynonymous","R27F Y35V K199I",3
"lib2","SARS-CoV-2","AATACAATATTACCAT",7,85.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25V Y35S S45K D98L V173I",5
"lib2","SARS-CoV-2","AATACAATCTACTGGC",2,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H G51A T140I T148S",4
"lib2","SARS-CoV-2","AATACAATGCTTGACA",5,38.82,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","S45W I88L R127G S139R C158I",5
"lib2","SARS-CoV-2","AATACAATGTGCTTTA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","F12W S113N R124K K132E P197*",5
"lib2","SARS-CoV-2","AATACAATTCACAAAA",3,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65H W106F",2
"lib2","SARS-CoV-2","AATACAATTGAGAAAC",14,203.35,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37G P54H R136Q V182R K198G",5
"lib2","SARS-CoV-2","AATACAATTTGCTGTA",3,39.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K K56S V180I",3
"lib2","SARS-CoV-2","AATACACAAAACGTAC",3,38.64,10.45,-0.38,0.06,2.95,1.08,0,">1 nonsynonymous","L122V G174M",2
"lib2","SARS-CoV-2","AATACACAATTAATCT",3,74.3,10.82,-0.01,0.04,3,1.02,0,">1 nonsynonymous","I28Y F160H",2
"lib2","SARS-CoV-2","AATACACACAAATAAT",1,37.86,8.51,-2.33,0.14,2.8,1,0.01,">1 nonsynonymous","F62Y K128S N157L A192T",4
"lib2","SARS-CoV-2","AATACACATAAATCGG",4,16.91,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C6V F17K G101W N120H G152L",5
"lib2","SARS-CoV-2","AATACACATGCACTTT",2,30.67,9.73,-1.1,0.13,2.23,1.08,0.01,"1 nonsynonymous","V11H",1
"lib2","SARS-CoV-2","AATACACCAGTGATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* K87V",2
"lib2","SARS-CoV-2","AATACACCGTCTGATT",2,14.93,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S41W L57W G146F C158P S184R K198T",6
"lib2","SARS-CoV-2","AATACACGACTACGCA",5,124.6,10.72,-0.11,0.03,2.98,1.03,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","AATACACGAGAACACC",1,43.81,6,-4.84,0.88,1.5,1.18,0.01,">1 nonsynonymous","S29Q Y91D S113R T201K",4
"lib2","SARS-CoV-2","AATACACGATCACCAC",1,16.82,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C61Q K87F P96R F156V F167P",5
"lib2","SARS-CoV-2","AATACACGCCCACCGT",1,9.7,9.78,-1.06,0.16,2.22,1,0.01,">1 nonsynonymous","D34S E141C",2
"lib2","SARS-CoV-2","AATACACGGGATATAA",2,9.45,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","L5M Y66W A81I L131C V173K",5
"lib2","SARS-CoV-2","AATACACGTAAACTCT",5,99.3,10.86,0.02,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACACTAAGTCTAA",5,3.88,NA,NA,NA,NA,NA,NA,"stop","E76* N107S Y119S",3
"lib2","SARS-CoV-2","AATACACTACCATTCC",11,7.47,NA,NA,NA,NA,NA,NA,"stop","D97G Q168L G174*",3
"lib2","SARS-CoV-2","AATACACTACTACACA",1,9.54,6,-4.84,2,1.5,1.29,0.08,">1 nonsynonymous","Y35I K87T Y93Q",3
"lib2","SARS-CoV-2","AATACACTCCTACAAT",8,53.02,6.61,-4.22,0.27,1.5,1.08,0.01,">1 nonsynonymous","D112S Q144S H189R",3
"lib2","SARS-CoV-2","AATACAGCAGCTGCTA",5,0.31,NA,NA,NA,NA,NA,NA,"stop","G152V G166S K199*",3
"lib2","SARS-CoV-2","AATACAGCCCAAGGAC",3,10.73,7.9,-2.93,0.39,1.5,1,0.07,">1 nonsynonymous","C6F F17D F44N D97F G172V",5
"lib2","SARS-CoV-2","AATACAGCTAACCCAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Q144*",1
"lib2","SARS-CoV-2","AATACAGGAGTATCCG",7,3.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATACAGGGTTATTCA",8,39.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K87L D112M G116L",3
"lib2","SARS-CoV-2","AATACAGGTTGCGTGA",12,91.43,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","I2R G9Y V32W G101A I138E P197S",6
"lib2","SARS-CoV-2","AATACAGTAGGTCTGA",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M F70Y N120V K199Q",4
"lib2","SARS-CoV-2","AATACAGTATGAAATA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","Q84* D112R",2
"lib2","SARS-CoV-2","AATACAGTTAGACTGA",12,68.51,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I28T A105R P133D",3
"lib2","SARS-CoV-2","AATACATAAAACAGTA",3,36.89,9.42,-1.42,0.13,1.83,1.05,0.01,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","AATACATAACATCTGG",6,60.27,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V11L F44T N64Y A89L G174R",5
"lib2","SARS-CoV-2","AATACATAAGTAATAT",2,15.27,9.21,-1.62,0.12,2.91,1.07,0.01,">1 nonsynonymous","N1C N13S V32L K87S L95F",5
"lib2","SARS-CoV-2","AATACATAATATTGTA",2,16.36,6.04,-4.8,0.66,1.5,1.13,0.01,">1 nonsynonymous","I80C A89C R124Q S129W",4
"lib2","SARS-CoV-2","AATACATAGACATTTT",5,58.26,10.95,0.11,0.06,2.91,1.08,0,"1 nonsynonymous","K26T",1
"lib2","SARS-CoV-2","AATACATAGACTAGTG",2,46.68,6,-4.84,0.45,2.86,1.13,0,">1 nonsynonymous","Y39K C158V",2
"lib2","SARS-CoV-2","AATACATATAAATTCA",7,49.39,10.88,0.05,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AATACATATTCACATT",3,87.68,9.98,-0.85,0.07,2.17,1.07,0,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","AATACATCCACACCTT",1,38.99,8.9,-1.93,0.12,2.91,1.03,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","AATACATCGATTTGCC",1,10.59,8.47,-2.37,0.28,1.5,1,0.02,">1 nonsynonymous","G9L G86D T201E",3
"lib2","SARS-CoV-2","AATACATCTGCCTACA",4,156.93,10.27,-0.56,0.03,2.98,1.05,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AATACATGAAAAACCA",15,1648.35,10.8,-0.03,0.03,2.95,1.06,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","AATACATGATTATTAA",13,243.9,10.71,-0.12,0.04,2.9,1.11,0,"1 nonsynonymous","P191Y",1
"lib2","SARS-CoV-2","AATACATTAACTCCAT",11,1.04,NA,NA,NA,NA,NA,NA,"stop","P54* T170F",2
"lib2","SARS-CoV-2","AATACATTAGAGAACC",3,14.87,6,-4.84,1.3,3,1.12,0.02,">1 nonsynonymous","K87G W106D",2
"lib2","SARS-CoV-2","AATACATTCTGATGCC",13,130.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37E I72H L187H",3
"lib2","SARS-CoV-2","AATACATTTCAACTAA",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D A89T F167L",3
"lib2","SARS-CoV-2","AATACCAAAACAAAAG",1,14.55,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N92G F99G N118R K128S S200T",5
"lib2","SARS-CoV-2","AATACCAAAGAGGCGA",6,69.1,10.87,0.03,0.05,2.93,1.07,0,"1 nonsynonymous","S147D",1
"lib2","SARS-CoV-2","AATACCAAATAATTCT",11,152,10.1,-0.74,0.07,2.4,1.03,0,"1 nonsynonymous","A81I",1
"lib2","SARS-CoV-2","AATACCAAATATTACG",7,65.4,10.6,-0.23,0.04,2.97,1.01,0,">1 nonsynonymous","S29N G116R",2
"lib2","SARS-CoV-2","AATACCAAGAATCCAT",1,15.23,10.9,0.07,0.11,2.97,1.04,0.01,"1 nonsynonymous","K26L",1
"lib2","SARS-CoV-2","AATACCAATTATCTAT",7,48.32,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R73F V180S P197V",3
"lib2","SARS-CoV-2","AATACCAATTTCGTGG",2,15.72,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R179I",1
"lib2","SARS-CoV-2","AATACCACGGGTAATC",7,87.47,9.82,-1.01,0.04,2.92,1.07,0,">1 nonsynonymous","V32R K114G T201Q",3
"lib2","SARS-CoV-2","AATACCACTATTAAAA",10,36.94,6.19,-4.64,0.34,1.5,1.09,0.01,">1 nonsynonymous","N107G R127L",2
"lib2","SARS-CoV-2","AATACCACTCATCGCA",6,66.82,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A105Q G155S Y178D",3
"lib2","SARS-CoV-2","AATACCACTGGACACG",9,87.16,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8Y S36L V52R Q144L",4
"lib2","SARS-CoV-2","AATACCACTTACAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49V T55S V71* F134* E141G S200G",6
"lib2","SARS-CoV-2","AATACCAGAAAAAAAG",6,39.75,10.83,0,0.07,2.97,1.05,0,">1 nonsynonymous","I2L V115S F160Y",3
"lib2","SARS-CoV-2","AATACCAGATTTGGTA",2,145.76,8.33,-2.51,0.08,2.32,1.07,0,">1 nonsynonymous","L5T K87N Q176C",3
"lib2","SARS-CoV-2","AATACCAGCATTCTGC",3,45.65,10.63,-0.21,0.04,2.92,1.07,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AATACCATAAAAGAAT",11,154.89,8.4,-2.43,0.11,2.54,1.14,0,">1 nonsynonymous","K56M Y119T G155I",3
"lib2","SARS-CoV-2","AATACCATAATGACAG",4,54.11,10.89,0.05,0.08,2.97,1.06,0,">1 nonsynonymous","N64S P197S",2
"lib2","SARS-CoV-2","AATACCATCAAGACCA",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A Y35P D90V K198R",4
"lib2","SARS-CoV-2","AATACCATTACCAAAG",1,11.98,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20R I104S G116Q T140R S184T",5
"lib2","SARS-CoV-2","AATACCATTGCCAAGT",16,94.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7L K56Q T63G G101S",4
"lib2","SARS-CoV-2","AATACCCAAAAACGTT",5,53.7,9.08,-1.75,0.13,1.77,1.14,0.01,">1 nonsynonymous","I2S Y35R F62G S108T",4
"lib2","SARS-CoV-2","AATACCCACCCAAAAC",5,49.17,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Q84Y L95H Y119P",3
"lib2","SARS-CoV-2","AATACCCACCTGTCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4V F12Q F44T A67I F185*",5
"lib2","SARS-CoV-2","AATACCCATTATAGTG",2,27.8,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","I88R G152L",2
"lib2","SARS-CoV-2","AATACCCCAAACAACA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S S45V N107I V153W Y165G",5
"lib2","SARS-CoV-2","AATACCCCAGTCAATA",12,112.91,9.47,-1.36,0.04,2.8,1.09,0,">1 nonsynonymous","T100I N118I",2
"lib2","SARS-CoV-2","AATACCCCCTATTCTG",4,21.38,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G86F W106M R127M F156E",4
"lib2","SARS-CoV-2","AATACCCCGCAGATTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","AATACCCCGTAATGAA",4,1.84,NA,NA,NA,NA,NA,NA,"stop","V103Q D137Y F160*",3
"lib2","SARS-CoV-2","AATACCCGGTCTGAGG",4,0.42,NA,NA,NA,NA,NA,NA,"stop","I88* K198G",2
"lib2","SARS-CoV-2","AATACCCTTAGTATTG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5P I142*",2
"lib2","SARS-CoV-2","AATACCGAACTTAAAT",11,139.86,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11S C61T G83V N107C P169E",5
"lib2","SARS-CoV-2","AATACCGAATATTAAG",3,35.5,6.77,-4.07,0.26,1.5,1.09,0.02,">1 nonsynonymous","L5F F47T V77F",3
"lib2","SARS-CoV-2","AATACCGAATGTATAT",4,1.04,NA,NA,NA,NA,NA,NA,"stop","N13I F99S K114* N120M",4
"lib2","SARS-CoV-2","AATACCGACTGTCAAC",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R C6R S147T",3
"lib2","SARS-CoV-2","AATACCGAGACCTTTC",5,17.01,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F12S T63M T148F N157V T201K",5
"lib2","SARS-CoV-2","AATACCGATGTAGCCT",3,38.37,10.56,-0.27,0.07,2.76,1.1,0,">1 nonsynonymous","V37A P96S P133A",3
"lib2","SARS-CoV-2","AATACCGCAAGCTAGG",15,282.88,10.14,-0.7,0.03,2.75,1.04,0,">1 nonsynonymous","Y39P T63F",2
"lib2","SARS-CoV-2","AATACCGCAAGGCTCA",11,87.43,9.09,-1.75,0.05,2.88,1.11,0,">1 nonsynonymous","E135G Q168L",2
"lib2","SARS-CoV-2","AATACCGCAGCAAAAA",6,37.9,6,-4.84,1.5,1.5,1.23,0.03,">1 nonsynonymous","N24L N40A P82I F160R",4
"lib2","SARS-CoV-2","AATACCGCGGGAGAAG",5,38.63,10.85,0.02,0.06,2.96,1.05,0,"1 nonsynonymous","K199M",1
"lib2","SARS-CoV-2","AATACCGGAAACCCAT",9,188.16,10.69,-0.14,0.04,2.93,1.07,0,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","AATACCGGAATGAGTT",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123M F160R",2
"lib2","SARS-CoV-2","AATACCGGACTTGAAC",4,11.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P82M I104S",2
"lib2","SARS-CoV-2","AATACCGGCAGGAAAT",2,10.96,11.15,0.31,0.04,2.99,1.04,0,"1 nonsynonymous","S139T",1
"lib2","SARS-CoV-2","AATACCGGGACTACCG",11,118.31,8.58,-2.26,0.06,1.68,1.06,0,">1 nonsynonymous","Y35N Y50F K56S G155H",4
"lib2","SARS-CoV-2","AATACCTAATATTTTT",1,44.17,10.54,-0.3,0.04,2.93,1.06,0,">1 nonsynonymous","P149L F160T",2
"lib2","SARS-CoV-2","AATACCTAGCATATAC",12,142.84,10.77,-0.06,0.05,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACCTATCGCATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9T E154*",2
"lib2","SARS-CoV-2","AATACCTTAAAAAAGA",12,2.06,NA,NA,NA,NA,NA,NA,"stop","G9* A18S Y35S T63Y G83N N92V Y121H V173W",8
"lib2","SARS-CoV-2","AATACCTTGTACACCT",2,20.89,9.78,-1.06,0.08,3,1,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","AATACCTTTAAAGAAA",1,103.33,10.06,-0.77,0.06,2.89,1.05,0,">1 nonsynonymous","N13K G116A N130R",3
"lib2","SARS-CoV-2","AATACGAAAATTACCT",5,24.08,9.49,-1.35,0.24,1.77,1.12,0.03,">1 nonsynonymous","N13T G83V K128E",3
"lib2","SARS-CoV-2","AATACGAAAATTTAAC",7,81.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17L R27V S129N P161F A190S",5
"lib2","SARS-CoV-2","AATACGAACAACAATT",4,12.16,6,-4.84,2,3,1.08,0,">1 nonsynonymous","Y91C D137M Y175S",3
"lib2","SARS-CoV-2","AATACGAACAACTTTA",8,133.4,10.39,-0.44,0.05,2.75,1.12,0,">1 nonsynonymous","S41I Y123K F185L",3
"lib2","SARS-CoV-2","AATACGAACCCGCAGT",8,28.2,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R136L V182E",2
"lib2","SARS-CoV-2","AATACGAACTTACATA",3,33.39,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V103Q L131E I138R",3
"lib2","SARS-CoV-2","AATACGAATACTGTAC",2,28.15,9.87,-0.96,0.12,2.57,1.07,0.01,">1 nonsynonymous","S45L N120S",2
"lib2","SARS-CoV-2","AATACGAATCACCTTT",4,34.17,10,-0.83,0.12,2.57,1.02,0.01,">1 nonsynonymous","S139A E186F",2
"lib2","SARS-CoV-2","AATACGAATGATTTGA",12,4.22,NA,NA,NA,NA,NA,NA,"stop","T15S S36* K56S Q79R N92S L162M",6
"lib2","SARS-CoV-2","AATACGAATTCCCGCT",2,15.82,10.84,0.01,0.09,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACGACATTACGAT",4,52.12,10.43,-0.4,0.04,2.91,1.02,0,">1 nonsynonymous","S36M Q84R E141Q",3
"lib2","SARS-CoV-2","AATACGACTTTTTCGG",1,10.43,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","AATACGAGAAACGAAA",1,35.8,9.67,-1.17,0.09,2.16,1.01,0,">1 nonsynonymous","K26V N64Y D90Y V173S",4
"lib2","SARS-CoV-2","AATACGAGCAGAACCC",2,2.04,NA,NA,NA,NA,NA,NA,"stop","N1S S29R D90V R136F I142E V181*",6
"lib2","SARS-CoV-2","AATACGAGCATAAATG",12,129.1,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86V Y119L",2
"lib2","SARS-CoV-2","AATACGATATACTTAA",1,44.49,10.88,0.04,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACGATATTCGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","AATACGCATGGACAGC",8,82.81,6,-4.84,2,3,1.22,0,">1 nonsynonymous","L38W N64L A89I F99P",4
"lib2","SARS-CoV-2","AATACGCATTAAATAA",1,6.03,6.06,-4.78,1.18,3,1.2,0.01,">1 nonsynonymous","A18L C61I I88Q Y119S",4
"lib2","SARS-CoV-2","AATACGCTAACAAACT",6,57.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94E L125D L131I",3
"lib2","SARS-CoV-2","AATACGCTACTTCTCA",5,68.28,9.94,-0.89,0.09,2.52,1,0,">1 nonsynonymous","S45G N58R D90S T100C",4
"lib2","SARS-CoV-2","AATACGCTAGACTAAT",5,129.61,9.94,-0.89,0.05,2.81,1.04,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","AATACGGACTACAATT",15,5.19,NA,NA,NA,NA,NA,NA,"stop","V37E A81Q G86* L162S",4
"lib2","SARS-CoV-2","AATACGGAGAAATATT",4,4.65,NA,NA,NA,NA,NA,NA,"stop","Y121L P133*",2
"lib2","SARS-CoV-2","AATACGGATAGTTATA",13,2.29,NA,NA,NA,NA,NA,NA,"stop","V77* E141L F160C V182N P197A",5
"lib2","SARS-CoV-2","AATACGGCATTTAATT",4,68.74,7.36,-3.47,0.33,1.5,1.15,0.03,">1 nonsynonymous","K94L Y119G K199W",3
"lib2","SARS-CoV-2","AATACGGCTCGACGAG",3,50.81,7.99,-2.85,0.29,1.52,1.07,0.03,">1 nonsynonymous","F44H G86A F160M",3
"lib2","SARS-CoV-2","AATACGGGTGTGACAT",2,5.37,6,-4.84,2,1.5,1.05,0.04,">1 nonsynonymous","G9F R25W N58A S129I Y178W",5
"lib2","SARS-CoV-2","AATACGGTCACACCCT",4,120.68,9.76,-1.08,0.04,2.97,1.07,0,">1 nonsynonymous","G9K K87Y Y175H",3
"lib2","SARS-CoV-2","AATACGTAATGGCGCG",6,102.58,10.23,-0.61,0.05,2.67,1.02,0,"1 nonsynonymous","R127H",1
"lib2","SARS-CoV-2","AATACGTAGACCCTGG",8,2.59,NA,NA,NA,NA,NA,NA,"stop","R16C Y175*",2
"lib2","SARS-CoV-2","AATACGTATATTCAAA",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S P54C G101S",3
"lib2","SARS-CoV-2","AATACGTATGTAAGGA",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P V52F L95Y I138R",4
"lib2","SARS-CoV-2","AATACGTCAAATTATT",7,4.05,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","AATACGTCAATAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K56W Y119V R127*",3
"lib2","SARS-CoV-2","AATACGTGAGGATTAT",6,21.83,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G101S K128S",2
"lib2","SARS-CoV-2","AATACGTGTGATTAAT",3,53.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44L C61L V103Q A145D",4
"lib2","SARS-CoV-2","AATACTAAATAAACAC",1,11.84,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","L60C S69V L95S N109F",4
"lib2","SARS-CoV-2","AATACTAACAACCCAG",6,26.48,7.57,-3.27,0.34,1.5,1.07,0.04,">1 nonsynonymous","V32R L38M F47I N151W G174I",5
"lib2","SARS-CoV-2","AATACTAACTTCTTAT",6,25.46,10.69,-0.14,0.05,2.95,1.05,0,">1 nonsynonymous","A14N S147N S184V",3
"lib2","SARS-CoV-2","AATACTACAACCAGTA",3,24.38,6,-4.84,1.24,1.5,1.08,0.03,">1 nonsynonymous","S19E C61L C102Q N157T",4
"lib2","SARS-CoV-2","AATACTACCTACGGAG",2,5.38,10.34,-0.5,0.19,2.92,1.06,0.03,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","AATACTACCTATATAA",13,160.94,10.13,-0.71,0.04,2.97,1.03,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","AATACTACGAGGCATG",9,25.69,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","T15L V37S A42R Q84R A105D I138S V180M",7
"lib2","SARS-CoV-2","AATACTACTAAAATGG",5,58.21,10.79,-0.05,0.03,2.96,1.04,0,"1 nonsynonymous","K132G",1
"lib2","SARS-CoV-2","AATACTACTCAAAACT",5,16.63,8.48,-2.36,0.24,2.26,1.05,0.02,">1 nonsynonymous","N64Q N107I",2
"lib2","SARS-CoV-2","AATACTACTCCCAATT",2,1.04,NA,NA,NA,NA,NA,NA,"stop","F62M N92* F160T",3
"lib2","SARS-CoV-2","AATACTACTGCATGCA",5,70.12,10.82,-0.01,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTACTGGAAGCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R A42R L95V I104Q T140K E154I Q168E Y175K S200E",9
"lib2","SARS-CoV-2","AATACTACTTTGGCCA",4,25.97,10.65,-0.18,0.06,2.87,1.13,0,"1 nonsynonymous","P54D",1
"lib2","SARS-CoV-2","AATACTAGCCAAATGT",6,1.27,NA,NA,NA,NA,NA,NA,"stop","N4L Y39* C61L L125W",4
"lib2","SARS-CoV-2","AATACTAGTGATTTAC",1,8.12,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C102L D112R",2
"lib2","SARS-CoV-2","AATACTATCTTGCATG",5,21.54,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N40L D68R D97S N120H",4
"lib2","SARS-CoV-2","AATACTATTAGACCCA",2,50.33,10.58,-0.26,0.07,2.94,1.06,0,">1 nonsynonymous","C61K D90L I104F",3
"lib2","SARS-CoV-2","AATACTCAAAGTATTC",7,84.07,8,-2.84,0.11,1.76,1.08,0,">1 nonsynonymous","V77L T100N N107P L122T P149L F156N",6
"lib2","SARS-CoV-2","AATACTCAACTATACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K P54H K94R T148R P161Q",5
"lib2","SARS-CoV-2","AATACTCAAGACCAAC",9,32.86,10.77,-0.06,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTCACACAAAAG",3,22.44,10.88,0.05,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTCACGCAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95P N107* K114E Y121T",4
"lib2","SARS-CoV-2","AATACTCACTTTATTG",7,24.03,6.02,-4.82,1.22,1.5,1.12,0.03,">1 nonsynonymous","S69Q C158M",2
"lib2","SARS-CoV-2","AATACTCAGCACATTA",6,56.76,10.44,-0.39,0.04,2.87,1.04,0,">1 nonsynonymous","G83F G152L",2
"lib2","SARS-CoV-2","AATACTCATGGAATTA",2,68.99,8.27,-2.57,0.14,2.53,1.06,0.01,">1 nonsynonymous","Y119A N157S",2
"lib2","SARS-CoV-2","AATACTCCACATAACT",6,71.17,9.44,-1.4,0.05,2.75,1.02,0,">1 nonsynonymous","R78F G152V",2
"lib2","SARS-CoV-2","AATACTCCCGACGCAT",13,185.73,8.21,-2.63,0.15,2.05,1.12,0.01,">1 nonsynonymous","Y121L I138P G166L",3
"lib2","SARS-CoV-2","AATACTCCCTAAAACT",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Q T63K K87N A105P F167Q A190L",6
"lib2","SARS-CoV-2","AATACTCCTACGTGTT",5,16.93,10.72,-0.12,0.11,2.89,1.05,0.01,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","AATACTCCTCTCTAAT",2,67.35,10.69,-0.15,0.03,2.98,1.05,0,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","AATACTCGTTCCCGCT",1,6.19,10.7,-0.14,0.07,3,1,0,">1 nonsynonymous","I2T E10L N120S",3
"lib2","SARS-CoV-2","AATACTCTCCACTCAG",5,8.31,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Q84W Y91D V103F",3
"lib2","SARS-CoV-2","AATACTCTGGTCAGGA",1,98.95,10.75,-0.09,0.03,2.98,1.04,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","AATACTCTGTCAAAGC",16,275.05,10.75,-0.09,0.03,2.91,1.07,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","AATACTCTTTCCAAAG",12,13,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6R N13P D34A N92K A105N N171D",6
"lib2","SARS-CoV-2","AATACTCTTTGGATTT",2,17.3,9.13,-1.7,0.06,2.96,1.06,0,">1 nonsynonymous","D98S L122S P149Q Q168D",4
"lib2","SARS-CoV-2","AATACTGAAATGTAGT",2,44.56,10.84,0.01,0.06,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTGAACGCCAAT",3,45.56,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A145C E154D L162H",3
"lib2","SARS-CoV-2","AATACTGACATAATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8V K87W Y143P T148* T201N",5
"lib2","SARS-CoV-2","AATACTGATAGAAGGG",4,12.03,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","A81L F99A",2
"lib2","SARS-CoV-2","AATACTGATAGTAGAA",10,6.25,NA,NA,NA,NA,NA,NA,"stop","T15S R27* L60V N151*",4
"lib2","SARS-CoV-2","AATACTGCAACCGTCC",1,48.47,10.48,-0.35,0.06,2.89,1.11,0,"1 nonsynonymous","S29L",1
"lib2","SARS-CoV-2","AATACTGCCATTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33F F62E R78C F99R Y119* A192T",6
"lib2","SARS-CoV-2","AATACTGGAAACGTAA",9,134.28,9.38,-1.46,0.08,2.24,1.05,0,">1 nonsynonymous","N40F N118Y",2
"lib2","SARS-CoV-2","AATACTGGCATCGGGT",8,2.89,NA,NA,NA,NA,NA,NA,"stop","I28* I72T L95D N120D S129R Y143V",6
"lib2","SARS-CoV-2","AATACTGTAGGCACCG",2,20.36,10.18,-0.65,0.1,2.65,1,0.01,">1 nonsynonymous","G146Y Q163L",2
"lib2","SARS-CoV-2","AATACTGTATAACTAC",7,0.66,NA,NA,NA,NA,NA,NA,"stop","P96H N107* S113A",3
"lib2","SARS-CoV-2","AATACTTAAGGCGTGG",2,6.91,11.04,0.21,0.08,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTTATAATTCAT",19,261.97,10.66,-0.18,0.03,2.91,1.08,0,"1 nonsynonymous","A42Y",1
"lib2","SARS-CoV-2","AATACTTATTAGTACT",15,177.73,9.28,-1.56,0.07,2.47,1.05,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","AATACTTGATAAGCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3R C150*",2
"lib2","SARS-CoV-2","AATACTTGTACCTTTC",4,120.62,10.29,-0.55,0.03,2.86,1.01,0,">1 nonsynonymous","T3Y N64A G83T",3
"lib2","SARS-CoV-2","AATACTTGTATTCAAT",10,11.74,NA,NA,NA,NA,NA,NA,"stop","C49Q A81*",2
"lib2","SARS-CoV-2","AATACTTGTCATGTTT",10,79.28,10.78,-0.06,0.03,2.88,1.13,0,">1 nonsynonymous","V37K T63N",2
"lib2","SARS-CoV-2","AATACTTTAAGCCACA",4,42.53,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37S L95S G152I",3
"lib2","SARS-CoV-2","AATACTTTGGGTACAT",11,237.78,10.79,-0.05,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATACTTTGGTTAATT",3,66.92,10.75,-0.08,0.04,2.9,1.11,0,"1 nonsynonymous","P7E",1
"lib2","SARS-CoV-2","AATACTTTTTATGCCT",2,36.7,8.15,-2.68,0.18,1.63,1.12,0.02,">1 nonsynonymous","L57M T148L Q176L",3
"lib2","SARS-CoV-2","AATAGAAAAATAACGT",2,9.34,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F44L I88N N110L L125M G174W",5
"lib2","SARS-CoV-2","AATAGAAAATTGTGCG",5,19.74,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V65L L95R K114Y Y165E",4
"lib2","SARS-CoV-2","AATAGAAAGGCATAGA",1,24.62,9.86,-0.98,0.14,2.27,1.05,0.01,">1 nonsynonymous","A105C G146A",2
"lib2","SARS-CoV-2","AATAGAAATCTGAATA",5,2.64,NA,NA,NA,NA,NA,NA,"stop","F8W D90* L95E N107V",4
"lib2","SARS-CoV-2","AATAGAACAGACTGAC",6,100.35,8.39,-2.44,0.23,1.5,1.03,0.02,">1 nonsynonymous","L5I L38R S45D R136W",4
"lib2","SARS-CoV-2","AATAGAACGAAAATAA",1,4.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","AATAGAACGAGATAAC",2,18.51,10.67,-0.16,0.05,3,1.01,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","AATAGAACGTAATGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83Y P96* A105V N120V",4
"lib2","SARS-CoV-2","AATAGAACTGTACTAA",7,75.95,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","AATAGAAGACCGAAAG",3,118.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W23S I142D P177F",3
"lib2","SARS-CoV-2","AATAGAAGACGTACTT",1,14.57,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L57G V77L Q144L C158Y",4
"lib2","SARS-CoV-2","AATAGAAGCTCCATAA",1,13.07,6,-4.84,2,1.53,1.03,0.01,">1 nonsynonymous","S19M P54I Y91T K114N Y119S T148S",6
"lib2","SARS-CoV-2","AATAGAAGCTTGCCGA",15,295,8.42,-2.41,0.1,2.43,1.04,0,"1 nonsynonymous","Q176V",1
"lib2","SARS-CoV-2","AATAGAATAGCAAATG",3,10.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9N V77W D97R K128V A145L",5
"lib2","SARS-CoV-2","AATAGAATATAGGGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","A89R V103K K132* G152I",4
"lib2","SARS-CoV-2","AATAGAATCAATTATC",3,52.93,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","K87T P96R V115G G146P G174N Y178T",6
"lib2","SARS-CoV-2","AATAGAATCTGTTCGT",1,11.07,8.64,-2.19,0.16,1.78,1.09,0.01,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","AATAGAATTGAAGCTT",12,136.81,7.97,-2.86,0.15,1.5,1.11,0.01,">1 nonsynonymous","D98H N107T S129M F156H A192T",5
"lib2","SARS-CoV-2","AATAGAATTGCCTCTA",1,29.25,10.33,-0.51,0.06,2.96,1.08,0,">1 nonsynonymous","A18E F156A",2
"lib2","SARS-CoV-2","AATAGACAATATACAC",6,37.08,8.21,-2.62,0.32,1.5,1,0.04,">1 nonsynonymous","W23M G174K",2
"lib2","SARS-CoV-2","AATAGACACATACATG",1,5.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L P82Q S139P P149L",4
"lib2","SARS-CoV-2","AATAGACACCTGTGGC",2,14.88,10.93,0.09,0.12,2.81,1.19,0,">1 nonsynonymous","L5I S53Q",2
"lib2","SARS-CoV-2","AATAGACCGACGATGC",10,27.93,6.72,-4.11,0.35,2.05,1.16,0.02,">1 nonsynonymous","A42S Y93L N120Y P197L",4
"lib2","SARS-CoV-2","AATAGACCGCTTTAAG",11,144.16,7.86,-2.97,0.11,2.07,1.06,0,">1 nonsynonymous","T3V Y123S N157R",3
"lib2","SARS-CoV-2","AATAGACCTACCCATA",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V I80T V103H R124P V173I",5
"lib2","SARS-CoV-2","AATAGACGATACGACT",5,109.38,10.87,0.03,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGACGGTAGCTTT",9,64.57,6.53,-4.31,0.59,1.5,1.28,0.04,">1 nonsynonymous","F62Y C102L G152I",3
"lib2","SARS-CoV-2","AATAGACGTAATAAGC",14,217.67,10.03,-0.81,0.06,2.37,1.06,0,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","AATAGACGTCTCTAGA",7,75.25,9.69,-1.15,0.1,1.91,1.08,0,"1 nonsynonymous","R127M",1
"lib2","SARS-CoV-2","AATAGACTACAAGGAC",2,20.44,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","AATAGACTCGGTAGCG",6,87.34,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","K48T P96T N110T P161G",4
"lib2","SARS-CoV-2","AATAGACTGGTAATGT",11,95.26,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","F62D F99L C150F",3
"lib2","SARS-CoV-2","AATAGACTGTCAATAA",2,8.62,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","P7H E10N G86T C150N",4
"lib2","SARS-CoV-2","AATAGAGATACCATTG",2,34.91,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y35S Y119V L162N S184L",4
"lib2","SARS-CoV-2","AATAGAGATATAGAAA",8,166.06,10.79,-0.04,0.05,2.91,1.08,0,"1 nonsynonymous","T201D",1
"lib2","SARS-CoV-2","AATAGAGGGTGGTAAA",2,23.88,10.08,-0.75,0.11,2.48,1,0.01,">1 nonsynonymous","T46R R136L L188K",3
"lib2","SARS-CoV-2","AATAGAGTATACCGGG",1,15.19,8.82,-2.01,0.16,2.42,1,0.01,">1 nonsynonymous","T55M D98T K132T Y143I",4
"lib2","SARS-CoV-2","AATAGAGTCTACGAAC",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S Q84M V103M S113G P161T",5
"lib2","SARS-CoV-2","AATAGAGTTAAAGGAA",4,176.02,8.42,-2.42,0.08,2.37,1.09,0,">1 nonsynonymous","S41R K56L G155P K198W",4
"lib2","SARS-CoV-2","AATAGAGTTATACTTG",15,214.9,10.22,-0.62,0.03,2.83,1.08,0,">1 nonsynonymous","N109V N118V",2
"lib2","SARS-CoV-2","AATAGATAAGAACGCC",2,102.62,10.64,-0.2,0.05,2.9,1,0,">1 nonsynonymous","A42S D59Y",2
"lib2","SARS-CoV-2","AATAGATAATCACAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","AATAGATAATCCGCAG",3,118.61,10.47,-0.37,0.06,2.91,1.04,0,">1 nonsynonymous","F62C G155M",2
"lib2","SARS-CoV-2","AATAGATAATGATGCG",3,89.55,10.76,-0.07,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGATATGCCAATG",8,2.19,NA,NA,NA,NA,NA,NA,"stop","A14N F62D D68E Q163*",4
"lib2","SARS-CoV-2","AATAGATCAAAAGCAC",1,1.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","AATAGATCATATATGC",1,8.98,6.55,-4.28,0.53,1.5,1.07,0.04,">1 nonsynonymous","C102A N118V R127C",3
"lib2","SARS-CoV-2","AATAGATCTTCTGGTA",4,82.4,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F12L K26T A42T V77S Y91G",5
"lib2","SARS-CoV-2","AATAGATGAAAACGCA",15,82.74,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A42W Y66P",2
"lib2","SARS-CoV-2","AATAGATGAAAGGAAG",4,15.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S69H V77G G146R F160P",4
"lib2","SARS-CoV-2","AATAGATGTAACCTAT",1,21.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46P L95R P149A",3
"lib2","SARS-CoV-2","AATAGATTGGTGCACT",6,22.34,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N30K V65Q T100S S108L",4
"lib2","SARS-CoV-2","AATAGCAAAAGAGCGG",14,127.63,6.08,-4.75,0.68,1.5,1.15,0.01,">1 nonsynonymous","G86M I142T",2
"lib2","SARS-CoV-2","AATAGCAAGAAAAACA",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I T15Y F99S Y121S G152Y",5
"lib2","SARS-CoV-2","AATAGCAATAACCTCG",3,74.35,10.09,-0.75,0.05,2.85,1.05,0,">1 nonsynonymous","G116R S184H A190C",3
"lib2","SARS-CoV-2","AATAGCAATGCTCCCG",1,12.87,10.76,-0.08,0.08,2.78,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGCACCAGTAACA",2,30.81,10.62,-0.21,0.07,2.91,1.09,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","AATAGCACGCCTACAT",5,52.97,10.24,-0.6,0.04,2.92,1.09,0,">1 nonsynonymous","V37Y K128A G174K",3
"lib2","SARS-CoV-2","AATAGCACTGATTACT",6,39.32,9.97,-0.87,0.11,2.82,1,0.01,">1 nonsynonymous","D34C I142Y",2
"lib2","SARS-CoV-2","AATAGCAGCCTCCCCC",3,39.25,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86S G116S D137K",3
"lib2","SARS-CoV-2","AATAGCAGTTTTCACA",26,310.74,10.32,-0.52,0.03,2.79,1.03,0,">1 nonsynonymous","N4R Y39H L162M",3
"lib2","SARS-CoV-2","AATAGCATAACATGCT",1,27.49,8.42,-2.42,0.1,2.11,1.05,0,">1 nonsynonymous","F44N G51R L60S G116Q",4
"lib2","SARS-CoV-2","AATAGCATCAACATCC",5,62.36,10.17,-0.66,0.05,2.76,1.05,0,">1 nonsynonymous","T100L P133F",2
"lib2","SARS-CoV-2","AATAGCATCTTGTGTG",10,57.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56L G86K K132V",3
"lib2","SARS-CoV-2","AATAGCATGTCAGGAA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","G9P Y91*",2
"lib2","SARS-CoV-2","AATAGCATTTTCAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G Q84N A89H",3
"lib2","SARS-CoV-2","AATAGCCAACGCTGCT",6,78.46,10.85,0.02,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGCCAAGCCGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","P7T Y91* D98A",3
"lib2","SARS-CoV-2","AATAGCCACTCATCAA",3,65.64,10.52,-0.31,0.06,2.89,1.09,0,">1 nonsynonymous","P54Y S164V",2
"lib2","SARS-CoV-2","AATAGCCATAAGCCAG",8,1.54,NA,NA,NA,NA,NA,NA,"stop","G9N K26* Y119T L183R",4
"lib2","SARS-CoV-2","AATAGCCATGTAAGAT",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R Y119V P149Y",3
"lib2","SARS-CoV-2","AATAGCCCACCAAATA",7,81.76,9.01,-1.83,0.04,2.87,1.09,0,">1 nonsynonymous","N110R T140L T170L",3
"lib2","SARS-CoV-2","AATAGCCGATTATAAG",1,3.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","AATAGCCGGAGACCCA",4,15.83,9.66,-1.17,0.06,2.89,1.08,0,">1 nonsynonymous","T3P Y119T",2
"lib2","SARS-CoV-2","AATAGCCTAGGTATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","I2A N110G E141P C150* N157R",5
"lib2","SARS-CoV-2","AATAGCGAATTTGGAA",15,267.13,10.79,-0.05,0.04,2.94,1.06,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","AATAGCGCAAACGGGA",3,14.99,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F8R R127N",2
"lib2","SARS-CoV-2","AATAGCGCGAATGCGA",2,16.58,9.21,-1.63,0.14,2.43,1,0.01,">1 nonsynonymous","V153Q F167L",2
"lib2","SARS-CoV-2","AATAGCGGTACTGAAC",1,62.76,10.85,0.02,0.05,2.99,1.02,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","AATAGCGTCCCACGAA",7,212.42,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N64S T100W Y178G",3
"lib2","SARS-CoV-2","AATAGCGTGACCTTGG",6,115.27,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S69V Y143N",2
"lib2","SARS-CoV-2","AATAGCTACTATGACG",1,21.62,8.71,-2.13,0.08,2.74,1.12,0,">1 nonsynonymous","Y119L I142F",2
"lib2","SARS-CoV-2","AATAGCTAGCCTCCTG",2,38.74,6.3,-4.54,0.64,1.5,1.15,0.03,">1 nonsynonymous","L5A W23N F44V L57T",4
"lib2","SARS-CoV-2","AATAGCTCTTATTAAC",3,35.34,6.03,-4.8,0.73,1.5,1.13,0.01,">1 nonsynonymous","D90F Y165R",2
"lib2","SARS-CoV-2","AATAGCTGAAGAATAC",6,149.66,10.71,-0.12,0.03,2.94,1.09,0,">1 nonsynonymous","G83R V153M",2
"lib2","SARS-CoV-2","AATAGCTGTATAATAA",9,53.43,8.7,-2.13,0.37,1.5,1,0.06,">1 nonsynonymous","N4R T55I L183T",3
"lib2","SARS-CoV-2","AATAGCTGTTGATATG",1,9.31,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","K56M T100W S139V C158S",4
"lib2","SARS-CoV-2","AATAGCTTAGTGATAG",4,78.67,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24M I104K Y119L",3
"lib2","SARS-CoV-2","AATAGCTTCAACTAGT",8,4.18,NA,NA,NA,NA,NA,NA,"stop","G86L L95* N120K N130C",4
"lib2","SARS-CoV-2","AATAGCTTTCTTTTAA",12,2.25,NA,NA,NA,NA,NA,NA,"stop","P7N Q84M N120* N171* S184*",5
"lib2","SARS-CoV-2","AATAGGAACAATGCAA",8,58.89,6.21,-4.62,0.8,1.5,1.17,0.02,">1 nonsynonymous","Y143S P161S",2
"lib2","SARS-CoV-2","AATAGGAACATCGTTC",8,65.27,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T3G K48P G83E S147V V173S",5
"lib2","SARS-CoV-2","AATAGGAACGAGATCA",2,17.4,10.73,-0.11,0.07,2.93,1.08,0,">1 nonsynonymous","T46N I72V",2
"lib2","SARS-CoV-2","AATAGGAATAAAAGTA",1,60.72,9.37,-1.46,0.04,2.87,1.16,0,">1 nonsynonymous","G9V T85S F156A G174K",4
"lib2","SARS-CoV-2","AATAGGACTTTTAAGA",10,6.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15M L183E",2
"lib2","SARS-CoV-2","AATAGGAGATGCACAC",8,60.01,8.84,-2,0.24,1.5,1.17,0.03,">1 nonsynonymous","R179T T201D",2
"lib2","SARS-CoV-2","AATAGGAGGAGTTACC",16,2.8,NA,NA,NA,NA,NA,NA,"stop","F12A S41L V115* F134C T201L",5
"lib2","SARS-CoV-2","AATAGGATTCATGACC",5,81.17,10.82,-0.02,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGGCAAAACTACG",5,34.74,10.95,0.12,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGGCAAAGCTGGC",5,0.42,NA,NA,NA,NA,NA,NA,"stop","K48* F99S K128S V173F",4
"lib2","SARS-CoV-2","AATAGGCATGACGCAA",11,195.11,10.78,-0.06,0.05,2.94,1.08,0,"1 nonsynonymous","Y39E",1
"lib2","SARS-CoV-2","AATAGGCCAACAAGAG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","S41L C49D T63F E135* N157S",5
"lib2","SARS-CoV-2","AATAGGCGAATTCTGA",3,0.78,NA,NA,NA,NA,NA,NA,"stop","P7* T15F N92L W106E L131N I138R",6
"lib2","SARS-CoV-2","AATAGGCGAGTATGAG",8,45.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V D34A N107H",3
"lib2","SARS-CoV-2","AATAGGCGCGGACATC",7,32.89,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Q79G P96H Y119R P161L",4
"lib2","SARS-CoV-2","AATAGGCTTCACCAAC",4,116.06,10.09,-0.74,0.06,2.6,1,0,">1 nonsynonymous","K48G T55L S129G P197K",4
"lib2","SARS-CoV-2","AATAGGGAACACTGTA",17,191.17,10.86,0.03,0.04,2.96,1.06,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","AATAGGGACCCCTTCA",1,29.16,8.63,-2.2,0.07,2.96,1.09,0,"1 nonsynonymous","N157M",1
"lib2","SARS-CoV-2","AATAGGGATAGCTGGG",6,65.27,10.9,0.06,0.06,2.85,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGGGCAAAAATTC",1,5.96,6,-4.84,1.32,1.5,1.03,0,">1 nonsynonymous","F47V F126D",2
"lib2","SARS-CoV-2","AATAGGGGCCGACCGG",9,109.67,9.92,-0.92,0.08,2.41,1.1,0,">1 nonsynonymous","T3G N30R P54N A190R",4
"lib2","SARS-CoV-2","AATAGGGGTAACCTAG",10,24.58,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","C49Y W106R K198L",3
"lib2","SARS-CoV-2","AATAGGGTGGCGTGAG",4,104.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K128L C150V",2
"lib2","SARS-CoV-2","AATAGGGTTAAGGACG",11,173.79,10.77,-0.07,0.04,2.92,1.08,0,"1 nonsynonymous","S139Q",1
"lib2","SARS-CoV-2","AATAGGTAGAACAAGG",4,0.73,NA,NA,NA,NA,NA,NA,"stop","A14K N40Q T55*",3
"lib2","SARS-CoV-2","AATAGGTAGGTATGCT",6,79.48,7.5,-3.33,0.42,1.5,1,0.07,">1 nonsynonymous","N4L R73M N107W",3
"lib2","SARS-CoV-2","AATAGGTGTCTCTTAA",4,8.36,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L60T D68M F185C",3
"lib2","SARS-CoV-2","AATAGGTTCAATATAA",2,38.29,6.16,-4.67,0.56,1.5,1.14,0.01,">1 nonsynonymous","V37A C61W G146N C158R",4
"lib2","SARS-CoV-2","AATAGTAAAATAAGTA",6,75.9,9.98,-0.86,0.08,2.25,1,0,"1 nonsynonymous","V180A",1
"lib2","SARS-CoV-2","AATAGTAACAATATGT",7,42.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116S L183G",2
"lib2","SARS-CoV-2","AATAGTAAGACAATCT",2,18.77,6.53,-4.3,0.67,1.5,1.12,0.06,">1 nonsynonymous","R25L G86H V115P",3
"lib2","SARS-CoV-2","AATAGTACAAACAGAC",1,13.6,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A105R Q168K",2
"lib2","SARS-CoV-2","AATAGTACAACACATG",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17P A89L F99D R127S P161I",5
"lib2","SARS-CoV-2","AATAGTACCACTTATG",10,188.75,9.98,-0.86,0.08,2.46,1.05,0,">1 nonsynonymous","C61E A81L",2
"lib2","SARS-CoV-2","AATAGTACCTACATCT",5,51.49,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V77G K94Y P149G L183Y",4
"lib2","SARS-CoV-2","AATAGTACCTCACTAA",2,49.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60P I88K Y119N",3
"lib2","SARS-CoV-2","AATAGTACGTAATAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52P T140L",2
"lib2","SARS-CoV-2","AATAGTACTAACCTTT",6,92.65,10.53,-0.31,0.05,2.87,1.07,0,">1 nonsynonymous","I2Q A81M T85R S200H",4
"lib2","SARS-CoV-2","AATAGTACTCACCCTT",1,82.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K87E G172S",2
"lib2","SARS-CoV-2","AATAGTACTCTATATG",3,36.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44L P96F",2
"lib2","SARS-CoV-2","AATAGTAGATTCACCC",15,133.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11I Y93H G146A G174P",4
"lib2","SARS-CoV-2","AATAGTAGCAATATGA",6,155.71,8.89,-1.94,0.07,2.83,1.12,0,">1 nonsynonymous","D59E S113V",2
"lib2","SARS-CoV-2","AATAGTAGTCAATAAC",4,83.14,10.15,-0.69,0.09,2.56,1.08,0,">1 nonsynonymous","T3R E141N L183V",3
"lib2","SARS-CoV-2","AATAGTATAAACCATC",3,31.45,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6A K94S S108T V180S",4
"lib2","SARS-CoV-2","AATAGTATCGTTAATT",6,42.29,9.34,-1.49,0.1,2.02,1.07,0,">1 nonsynonymous","Q84R Y121R",2
"lib2","SARS-CoV-2","AATAGTATGATTCCCC",1,6.56,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","V11Y P82S",2
"lib2","SARS-CoV-2","AATAGTATTTTAGTAT",14,11.03,NA,NA,NA,NA,NA,NA,"stop","I2R F12T W23E S113T G146F P197*",6
"lib2","SARS-CoV-2","AATAGTCAATTCAAGG",8,148.31,10.12,-0.72,0.03,2.85,1.03,0,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","AATAGTCACGACCATT",2,37.28,9.01,-1.83,0.14,1.73,1.09,0.01,">1 nonsynonymous","P82T A190C",2
"lib2","SARS-CoV-2","AATAGTCATAAGGCTA",6,10.68,6,-4.84,2,2.28,1.15,0.02,">1 nonsynonymous","A14M W23L F99S P133S L162I P197L",6
"lib2","SARS-CoV-2","AATAGTCATCGTTCAA",5,0,NA,NA,NA,NA,NA,NA,"stop","C49H D68* N107I K132N V180S",5
"lib2","SARS-CoV-2","AATAGTCATTACGACA",3,52.99,10.24,-0.6,0.06,2.77,1.11,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","AATAGTCCAGACATCT",13,82.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10C S41D R73G L95H",4
"lib2","SARS-CoV-2","AATAGTCCGCCTATTT",4,17.12,10.73,-0.11,0.06,2.97,1,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","AATAGTCGCTAACCAC",1,25.27,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36A G83N V103M P133K",4
"lib2","SARS-CoV-2","AATAGTCTAAAACCAA",3,132.52,10.24,-0.59,0.04,2.77,1.07,0,">1 nonsynonymous","A18S A105W F160R",3
"lib2","SARS-CoV-2","AATAGTCTTGAAAGCA",18,279.92,9.78,-1.06,0.05,1.99,1.06,0,">1 nonsynonymous","S45T P82K T100V",3
"lib2","SARS-CoV-2","AATAGTCTTGAAGCTG",7,88.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50D G83F T100D C150A",4
"lib2","SARS-CoV-2","AATAGTCTTGAATTCC",4,63.76,10.28,-0.55,0.07,2.75,1.07,0,">1 nonsynonymous","D59G A81C K199M",3
"lib2","SARS-CoV-2","AATAGTGAGATGGGCG",4,1,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","AATAGTGATGTAGAAA",8,9.08,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D34L V103Q",2
"lib2","SARS-CoV-2","AATAGTGCATGACTAG",2,32.19,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G86V N118D",2
"lib2","SARS-CoV-2","AATAGTGCCTAATGAA",3,21.14,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","G146A L183P",2
"lib2","SARS-CoV-2","AATAGTGGTAAATACC",1,30.03,10.58,-0.26,0.06,2.79,1.18,0,">1 nonsynonymous","I2N E141I",2
"lib2","SARS-CoV-2","AATAGTGTTACTAGTA",2,6.8,6.18,-4.66,0.74,3,1.14,0.02,">1 nonsynonymous","V37R V103N",2
"lib2","SARS-CoV-2","AATAGTTACTTTACGC",2,17.93,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V52R K94A N120M R136M L162V",5
"lib2","SARS-CoV-2","AATAGTTAGAAGATCA",9,51.89,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N4V K128Y C150D",3
"lib2","SARS-CoV-2","AATAGTTATAAGCCGT",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C F44L",2
"lib2","SARS-CoV-2","AATAGTTATATAATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64S S147Y",2
"lib2","SARS-CoV-2","AATAGTTCTACTCAAA",1,55.44,10.9,0.06,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATAGTTGAGATGAAT",5,17.95,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G9P C49R L60R",3
"lib2","SARS-CoV-2","AATAGTTGGTCAGCAA",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53V P149E",2
"lib2","SARS-CoV-2","AATAGTTGTCAACGAT",3,9.67,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34L D68T I88W K94F G146W F167G",6
"lib2","SARS-CoV-2","AATAGTTTTGCGAAAT",1,2.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","AATATAAAAAGCACTT",3,60.59,10.44,-0.4,0.08,2.84,1.09,0,">1 nonsynonymous","E10A N120F",2
"lib2","SARS-CoV-2","AATATAAAAATGCGCG",7,101.62,6,-4.84,1.79,1.5,1.19,0.01,">1 nonsynonymous","G86Y C158G",2
"lib2","SARS-CoV-2","AATATAAAAATGTACA",1,6.8,9.22,-1.61,0.14,2.81,1.02,0,">1 nonsynonymous","D98E I142R",2
"lib2","SARS-CoV-2","AATATAAAACAAAGAA",4,33.94,8.2,-2.64,0.31,1.5,1,0.05,"1 nonsynonymous","L183H",1
"lib2","SARS-CoV-2","AATATAAAACCTTCGA",10,0.84,NA,NA,NA,NA,NA,NA,"stop","Y50K K56T Y119L S129* G146S",5
"lib2","SARS-CoV-2","AATATAAAAGATTGGC",4,36.71,6.74,-4.09,0.37,1.5,1.16,0.02,">1 nonsynonymous","I2G C61A P96R A105T P149L",5
"lib2","SARS-CoV-2","AATATAAAAGTTACAA",2,10.76,10.98,0.14,0.1,2.95,1.06,0.01,"synonymous","",0
"lib2","SARS-CoV-2","AATATAAAATAAAGTA",6,46.24,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","I80H R136F Q176T",3
"lib2","SARS-CoV-2","AATATAAAATTATCGC",4,3.74,NA,NA,NA,NA,NA,NA,"stop","K132* Q144M G152L T201C",4
"lib2","SARS-CoV-2","AATATAAACCGAGTTA",5,50.64,10.74,-0.09,0.03,3,1,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","AATATAAACGAATAGT",1,16.95,6,-4.84,2,1.5,1.09,0.03,"1 nonsynonymous","R127W",1
"lib2","SARS-CoV-2","AATATAAACGCGAGAT",3,40.26,10.77,-0.07,0.05,2.93,1.09,0,"1 nonsynonymous","S41Q",1
"lib2","SARS-CoV-2","AATATAAATAGGTATT",4,59.29,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","C6I E10M Y39G C150I",4
"lib2","SARS-CoV-2","AATATAAATATGAAAA",3,13.55,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","P82L D98M G116D K128H G174W",5
"lib2","SARS-CoV-2","AATATAAATCATAAGC",1,2.1,NA,NA,NA,NA,NA,NA,"stop","S41E K114* T148*",3
"lib2","SARS-CoV-2","AATATAAATCCAAGGA",2,6.14,10.62,-0.21,0.07,3,1.01,0,">1 nonsynonymous","S41N Y123A T201C",3
"lib2","SARS-CoV-2","AATATAAATGAGATTG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92W I104Y G146S T201K",4
"lib2","SARS-CoV-2","AATATAAATTATGAAT",16,192.3,10.81,-0.02,0.03,2.89,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AATATAACACTTTACG",11,98.11,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N58I N64T Y91T P96R G174T",5
"lib2","SARS-CoV-2","AATATAACCAACGGCT",5,25.16,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C61W Y93P G146S",3
"lib2","SARS-CoV-2","AATATAACCAATAATT",6,99.4,10.35,-0.49,0.04,2.85,1.06,0,">1 nonsynonymous","S29L D59T",2
"lib2","SARS-CoV-2","AATATAACCCTTGATA",5,37.08,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V32K T100P K128N F156R",4
"lib2","SARS-CoV-2","AATATAACCTGAGAAT",4,74.14,8.34,-2.49,0.12,2.07,1.08,0.01,">1 nonsynonymous","S53Y G117L S164M",3
"lib2","SARS-CoV-2","AATATAACGATTACTT",1,15.25,6.21,-4.63,1.56,3,1.12,0.01,">1 nonsynonymous","P82H Y143W",2
"lib2","SARS-CoV-2","AATATAACGTTCCTCT",10,132.76,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y39K F99N V115F",3
"lib2","SARS-CoV-2","AATATAACTTGACCAG",10,21.73,7.79,-3.04,0.35,1.5,1,0.06,">1 nonsynonymous","L60F Y91A F99I I142L P149Q C195W",6
"lib2","SARS-CoV-2","AATATAAGAATTCCCA",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149F G155A Y178T",3
"lib2","SARS-CoV-2","AATATAAGGCTTCCGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","AATATAAGTGTAATAG",13,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D Y93N",2
"lib2","SARS-CoV-2","AATATAATAAAGCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M C61R N118T E141L",4
"lib2","SARS-CoV-2","AATATAATAAAGCCGC",10,141.7,9.93,-0.9,0.06,2.08,1.08,0,">1 nonsynonymous","R16V V37L G51Y",3
"lib2","SARS-CoV-2","AATATAATATCAGACC",2,33.43,9.96,-0.88,0.11,2.25,1.19,0.01,">1 nonsynonymous","A81R Y91K L122S",3
"lib2","SARS-CoV-2","AATATAATATCTGAGT",1,10.42,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","N30V C61A D98F Q168I",4
"lib2","SARS-CoV-2","AATATAATGAACACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6M F47C K128S I138* V182D",5
"lib2","SARS-CoV-2","AATATAATGCATCTAA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","L5* D97P",2
"lib2","SARS-CoV-2","AATATAATGGTGCTCC",6,22.36,6,-4.84,1.74,1.5,1.15,0.02,">1 nonsynonymous","P82R A89I T201N",3
"lib2","SARS-CoV-2","AATATAATGTAAATAG",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R L57A G86K S139Q A145C V181G",6
"lib2","SARS-CoV-2","AATATAATGTAAGCAT",2,9.54,11.1,0.27,0.11,2.98,1.06,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","AATATAATTAACAAAG",2,18.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33S F99S S164A T170R",4
"lib2","SARS-CoV-2","AATATAATTAATCTCT",9,41.34,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y66T C102G",2
"lib2","SARS-CoV-2","AATATAATTGGTTAAA",1,12.66,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","I72Q T170Y",2
"lib2","SARS-CoV-2","AATATAATTTGCTCAC",2,77.19,10.05,-0.79,0.05,2.67,1.03,0,">1 nonsynonymous","Y66A D98S K114R S129E",4
"lib2","SARS-CoV-2","AATATAATTTTCACGA",9,66.64,6,-4.84,2,3,1.24,0,">1 nonsynonymous","K56A C102H",2
"lib2","SARS-CoV-2","AATATAATTTTGTTAC",11,53.09,8.83,-2.01,0.16,1.5,1,0.01,">1 nonsynonymous","V103A N110G",2
"lib2","SARS-CoV-2","AATATACAAACTCTTC",19,58.74,6.75,-4.09,0.46,1.5,1.16,0.04,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","AATATACAAATCAGGA",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K I142F Q176L",3
"lib2","SARS-CoV-2","AATATACAACACTTTT",4,29.64,9.65,-1.19,0.2,1.83,1.06,0.01,">1 nonsynonymous","A22T Y123T",2
"lib2","SARS-CoV-2","AATATACACCAGAAGG",3,69.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P D75L",2
"lib2","SARS-CoV-2","AATATACACGTCATCA",2,71.65,9.31,-1.53,0.04,2.88,1.11,0,">1 nonsynonymous","N157S T201Q",2
"lib2","SARS-CoV-2","AATATACAGATGTGTA",7,195.22,10.88,0.04,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATACAGGAATTTT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","L5T T55Q G152* S184R",4
"lib2","SARS-CoV-2","AATATACAGTAACAGG",5,29.22,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S147Y F167K N171P",3
"lib2","SARS-CoV-2","AATATACAGTGCTTTT",1,50.32,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50A I142S",2
"lib2","SARS-CoV-2","AATATACATAACAAAA",1,22.75,7.91,-2.93,0.33,1.6,1.19,0.03,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","AATATACATATATGCA",8,151.47,10.09,-0.75,0.04,2.79,1.1,0,">1 nonsynonymous","R27W Y121L",2
"lib2","SARS-CoV-2","AATATACATGGCGTGT",1,57.18,10.38,-0.46,0.03,2.93,1.03,0,">1 nonsynonymous","P7V C61R",2
"lib2","SARS-CoV-2","AATATACCAACATTTC",2,35.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50T Q176P",2
"lib2","SARS-CoV-2","AATATACCAATCGCCA",11,111.02,6.58,-4.26,0.43,1.5,1.21,0.01,">1 nonsynonymous","S41R L95F T140S",3
"lib2","SARS-CoV-2","AATATACCACGATCCT",7,1,NA,NA,NA,NA,NA,NA,"stop","K26Q S36* S147* S164N",4
"lib2","SARS-CoV-2","AATATACCCCGCCATT",6,10.45,NA,NA,NA,NA,NA,NA,"stop","P7N S43* T55N A81R",4
"lib2","SARS-CoV-2","AATATACCCGGCATCA",3,0.97,NA,NA,NA,NA,NA,NA,"stop","N30Y K56A R73K N120*",4
"lib2","SARS-CoV-2","AATATACCGAATGGCG",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F K56H V77I L95N Y143T",5
"lib2","SARS-CoV-2","AATATACCGATGTCAT",9,251.59,8.82,-2.01,0.05,2.62,1.08,0,"1 nonsynonymous","Q176C",1
"lib2","SARS-CoV-2","AATATACCGGGACATG",9,89.58,10.04,-0.8,0.05,2.69,1.02,0,">1 nonsynonymous","N1Y C31M L122G",3
"lib2","SARS-CoV-2","AATATACCGGGCGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83* R124Q",2
"lib2","SARS-CoV-2","AATATACCGGTATTGG",2,29.5,10.4,-0.44,0.09,2.91,1.04,0,">1 nonsynonymous","W106F E141D",2
"lib2","SARS-CoV-2","AATATACCTAGCCAAC",6,27.01,6.67,-4.17,0.47,1.5,1.13,0.04,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","AATATACGAACAAGGG",2,24.54,7.22,-3.62,0.31,1.5,1.22,0.02,">1 nonsynonymous","I28G N64T N120M Y143H F160G",5
"lib2","SARS-CoV-2","AATATACGCCATATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib2","SARS-CoV-2","AATATACTACCTTACC",5,60.92,8.17,-2.67,0.13,2.28,1.1,0.01,">1 nonsynonymous","T15N S113V",2
"lib2","SARS-CoV-2","AATATACTATAAAACC",6,42.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L Y123V F134S A145R",4
"lib2","SARS-CoV-2","AATATAGAAATAAATA",1,60.92,10.37,-0.46,0.03,2.94,1.06,0,">1 nonsynonymous","N64Y S147R F156H",3
"lib2","SARS-CoV-2","AATATAGAAATGTGCG",7,5.9,NA,NA,NA,NA,NA,NA,"stop","I2* D90W E135R",3
"lib2","SARS-CoV-2","AATATAGAACAGATAT",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76F K87L D97N Q168K",4
"lib2","SARS-CoV-2","AATATAGACTACTTAC",4,43.33,10.75,-0.09,0.08,2.8,1.21,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","AATATAGAGAGACAGG",1,13.01,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y66G A105F S129Y",3
"lib2","SARS-CoV-2","AATATAGAGCACACTA",6,14.27,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13F N30T Y93H",3
"lib2","SARS-CoV-2","AATATAGATGCGTATT",13,127.71,9.2,-1.64,0.08,1.76,1.08,0,"1 nonsynonymous","V77S",1
"lib2","SARS-CoV-2","AATATAGCAACGTACT",4,24.37,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S19E F44H D112N",3
"lib2","SARS-CoV-2","AATATAGCCTAATTAC",2,35.48,10.78,-0.06,0.03,3,1.03,0,">1 nonsynonymous","R27V D97H T148F",3
"lib2","SARS-CoV-2","AATATAGGACAATTTG",7,44.92,10.07,-0.76,0.07,2.92,1.04,0,">1 nonsynonymous","A145R T201K",2
"lib2","SARS-CoV-2","AATATAGGACATGTCA",12,67.74,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G51V A81R D90M W106P S113V N120S F160G K199G",8
"lib2","SARS-CoV-2","AATATAGGGATAACTA",3,7.43,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","N13S G101I Y143T",3
"lib2","SARS-CoV-2","AATATAGTAGCACGGT",5,134.1,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G83D I104D Q163E Y178K",4
"lib2","SARS-CoV-2","AATATAGTAGTATCGA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W G83S E141W N151I G155V",5
"lib2","SARS-CoV-2","AATATAGTAGTGCATT",17,137.94,10.55,-0.29,0.05,2.95,1.04,0,"1 nonsynonymous","S45K",1
"lib2","SARS-CoV-2","AATATAGTATCTCCCA",6,45.92,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","A67S R124L Q176M",3
"lib2","SARS-CoV-2","AATATAGTGGGCTAAA",1,7.68,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L57Y D68S",2
"lib2","SARS-CoV-2","AATATAGTGGTGGACA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N40P F99L G146* N171T Y178R",5
"lib2","SARS-CoV-2","AATATAGTTACAACAA",6,32.75,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S43Y E76T L95Y Y119L G146Y",5
"lib2","SARS-CoV-2","AATATAGTTTAACGAG",2,19.41,10.84,0,0.09,2.73,1.28,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATATAACATGCAT",1,145.37,10.85,0.01,0.05,2.92,1.1,0,"1 nonsynonymous","F62Y",1
"lib2","SARS-CoV-2","AATATATAACGGGGCA",15,250.17,10.59,-0.24,0.03,2.92,1.06,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","AATATATAATAACCCA",5,13.73,9.27,-1.57,0.21,1.59,1.04,0.02,">1 nonsynonymous","I2E A22H V77Q K132I T201R",5
"lib2","SARS-CoV-2","AATATATAATGCAAAT",6,57.82,10.2,-0.63,0.04,2.93,1.06,0,">1 nonsynonymous","S29A A42E G174T",3
"lib2","SARS-CoV-2","AATATATACACAAAGG",12,135.77,10.81,-0.03,0.03,2.91,1.1,0,">1 nonsynonymous","D59Y K198M",2
"lib2","SARS-CoV-2","AATATATACACAGCAT",3,7.55,9.77,-1.07,0.09,3,1.04,0,">1 nonsynonymous","C61N F156N",2
"lib2","SARS-CoV-2","AATATATACCATCGGT",4,26.72,11.12,0.28,0.09,3,1.02,0,">1 nonsynonymous","V37S Y143H N171Y",3
"lib2","SARS-CoV-2","AATATATACCGAGGTG",6,0.11,NA,NA,NA,NA,NA,NA,"stop","D90* R127T C150V V173S",4
"lib2","SARS-CoV-2","AATATATACTGGCAAA",7,50.87,6.94,-3.9,0.27,1.5,1.14,0.02,">1 nonsynonymous","Y50L T100N",2
"lib2","SARS-CoV-2","AATATATATAACCGCT",11,56.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2R F44Q F99T I142M",4
"lib2","SARS-CoV-2","AATATATATACTAAGA",1,19.73,10.71,-0.13,0.13,2.91,1.11,0.01,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AATATATATCCTTCGA",5,20.27,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N107L C150K",2
"lib2","SARS-CoV-2","AATATATATTAACTTC",3,10.73,10.11,-0.73,0.1,2.84,1,0.01,">1 nonsynonymous","I2T V37M G51E",3
"lib2","SARS-CoV-2","AATATATCCATTAGGT",1,14.68,9.38,-1.45,0.1,2.72,1.04,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","AATATATCGAAGTTAG",7,58.52,10.91,0.07,0.03,2.91,1.09,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","AATATATCTAGCTATT",12,270.19,8.92,-1.91,0.05,2.91,1.11,0,">1 nonsynonymous","L5A N157H",2
"lib2","SARS-CoV-2","AATATATCTATAGAGC",2,23.74,10.68,-0.15,0.04,2.99,1.05,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","AATATATCTTAACGAG",2,4.21,NA,NA,NA,NA,NA,NA,"stop","F8G T15* S29R C49* G83S Y93S E135R",7
"lib2","SARS-CoV-2","AATATATGAAATAGCA",7,34.62,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N64R R78L G86L L131V T148Y",5
"lib2","SARS-CoV-2","AATATATGCTAGCGAA",2,80.07,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G83K C158L F167S",3
"lib2","SARS-CoV-2","AATATATGGTATGGCC",1,40.08,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L125Q I138C C158L",3
"lib2","SARS-CoV-2","AATATATGTAAAGAAT",2,4.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","AATATATTACTAAAAA",7,287.83,10.84,0,0.04,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATATTGAAGTGAT",4,24.53,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P96M Y143L G152N",3
"lib2","SARS-CoV-2","AATATATTGCGTAACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L R127L",2
"lib2","SARS-CoV-2","AATATATTGGGCACTC",1,15.13,10.35,-0.48,0.06,2.95,1.01,0,">1 nonsynonymous","S41L G152M",2
"lib2","SARS-CoV-2","AATATATTTGGCTTGT",3,9.92,10.65,-0.18,0.1,2.86,1.02,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATATCAAAATAGGGG",6,46.49,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","R127V Q176K",2
"lib2","SARS-CoV-2","AATATCAACACACTCC",8,101,9.06,-1.78,0.07,2,1.06,0,">1 nonsynonymous","T15C G83R G116V",3
"lib2","SARS-CoV-2","AATATCAACTGTCAAA",7,14.69,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","T46F A105R",2
"lib2","SARS-CoV-2","AATATCAAGTCCGAAG",6,17.83,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N64M F99K A105N G172Q T193A G196S",6
"lib2","SARS-CoV-2","AATATCACATAGTGGA",7,87.38,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F99M R124F",2
"lib2","SARS-CoV-2","AATATCAGACAAAATA",6,30.81,7.32,-3.51,0.24,1.5,1.11,0.01,">1 nonsynonymous","A14R Y121F Y165R",3
"lib2","SARS-CoV-2","AATATCAGAGTGAACG",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91H C102R K114S G172W P191Q T201K",6
"lib2","SARS-CoV-2","AATATCAGATGGGTAA",4,101.14,10.14,-0.7,0.04,2.96,1.02,0,"1 nonsynonymous","V11Y",1
"lib2","SARS-CoV-2","AATATCAGCAAATTGG",2,13.59,9.7,-1.13,0.08,2.96,1,0,"1 nonsynonymous","G116C",1
"lib2","SARS-CoV-2","AATATCAGTCTACACA",10,101.52,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9S R25A T63F K94F I104Y",5
"lib2","SARS-CoV-2","AATATCATAATTTATA",16,155.57,10.86,0.02,0.05,2.9,1.08,0,"1 nonsynonymous","A42G",1
"lib2","SARS-CoV-2","AATATCATAGAAGTAT",4,71.93,10.93,0.09,0.05,2.92,1.09,0,">1 nonsynonymous","S41T L122S",2
"lib2","SARS-CoV-2","AATATCATCATATCAA",9,6.78,NA,NA,NA,NA,NA,NA,"stop","G9K F44L P82C Y93A R124A E141Q G146* T170R S200M",9
"lib2","SARS-CoV-2","AATATCATGATTACAT",3,43.02,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y143S Q168C Y178I",3
"lib2","SARS-CoV-2","AATATCATGTGTATTA",4,83.32,10.3,-0.54,0.05,2.81,1.1,0,">1 nonsynonymous","A14T S147R",2
"lib2","SARS-CoV-2","AATATCATTCTTAACC",4,8.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40I F99G L183F",3
"lib2","SARS-CoV-2","AATATCATTGAAAAGC",6,167.02,10.15,-0.69,0.02,2.82,1.07,0,"1 nonsynonymous","C6Y",1
"lib2","SARS-CoV-2","AATATCCAAAAGCCCT",10,185.51,10.74,-0.1,0.04,2.91,1.08,0,">1 nonsynonymous","V65L N110L",2
"lib2","SARS-CoV-2","AATATCCAAGGTGCAT",8,53.64,10.68,-0.16,0.03,2.87,1.07,0,">1 nonsynonymous","T15F P197V",2
"lib2","SARS-CoV-2","AATATCCACAATATGG",1,33.8,10.16,-0.68,0.09,2.52,1,0,">1 nonsynonymous","L57R T63H",2
"lib2","SARS-CoV-2","AATATCCAGAAACTTT",12,83.5,10.83,0,0.05,2.92,1.09,0,">1 nonsynonymous","P54R L95V",2
"lib2","SARS-CoV-2","AATATCCAGCGCAGCG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","F12Y T55V T85* S129A G152N",5
"lib2","SARS-CoV-2","AATATCCATACAATTA",3,46.17,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L38Q G116P L131Q",3
"lib2","SARS-CoV-2","AATATCCATGAACAGC",9,76.92,9.7,-1.14,0.07,2.02,1.05,0,">1 nonsynonymous","A89Q K199N",2
"lib2","SARS-CoV-2","AATATCCCAAATATCA",2,25.81,10.06,-0.78,0.1,2.46,1,0,">1 nonsynonymous","S53P L60V F134A",3
"lib2","SARS-CoV-2","AATATCCCAAGTTTGA",3,67.04,10.41,-0.43,0.03,2.94,1.07,0,"1 nonsynonymous","A145M",1
"lib2","SARS-CoV-2","AATATCCCACCTATGC",1,1.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","AATATCCCAGCCGAAA",12,232.06,9.72,-1.12,0.08,2.1,1.06,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AATATCCCTGAAACAG",1,18.43,8.46,-2.38,0.24,1.79,1.27,0.02,">1 nonsynonymous","P133T I142W",2
"lib2","SARS-CoV-2","AATATCCGAACCCCTG",7,92.35,10.28,-0.55,0.03,2.88,1.08,0,">1 nonsynonymous","N1Y G116E P149V",3
"lib2","SARS-CoV-2","AATATCCTAAGGTGAC",9,77.88,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D68V P82L E154L H189C",4
"lib2","SARS-CoV-2","AATATCCTACCACTGG",1,23.22,10.18,-0.65,0.06,2.99,1,0,">1 nonsynonymous","N107P T148R",2
"lib2","SARS-CoV-2","AATATCCTACTTTAGG",3,36.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V37L V115F L162T G172T",4
"lib2","SARS-CoV-2","AATATCCTAGTAACCC",4,119.52,10.25,-0.59,0.05,2.8,1.03,0,">1 nonsynonymous","E10T R27Y G83R",3
"lib2","SARS-CoV-2","AATATCCTCACAACCT",2,0.33,NA,NA,NA,NA,NA,NA,"stop","F17* K26R A33S S45Y W106P Y119T P177H",7
"lib2","SARS-CoV-2","AATATCCTCCTACGTC",7,99.58,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","R127S C150Y K199Q",3
"lib2","SARS-CoV-2","AATATCCTTACGTACG",3,22.6,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N1T A89P C158I",3
"lib2","SARS-CoV-2","AATATCGACTGACAAT",17,16.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17L S19Q S36Y",3
"lib2","SARS-CoV-2","AATATCGATTGGACAT",2,31.61,10.9,0.06,0.06,2.98,1.06,0,"1 nonsynonymous","K48Q",1
"lib2","SARS-CoV-2","AATATCGCAGGTAATT",5,137.69,10.89,0.06,0.05,2.97,1.06,0,"1 nonsynonymous","Y39M",1
"lib2","SARS-CoV-2","AATATCGCGTAACCGA",2,4.67,NA,NA,NA,NA,NA,NA,"stop","S43T Q168* Y178*",3
"lib2","SARS-CoV-2","AATATCGCGTACAGTA",14,59.94,10.25,-0.58,0.04,2.86,1.12,0,">1 nonsynonymous","K56E A89S G174K",3
"lib2","SARS-CoV-2","AATATCGTATCTCCAA",2,66.8,10.33,-0.5,0.05,2.85,1.08,0,">1 nonsynonymous","T46G S184T",2
"lib2","SARS-CoV-2","AATATCGTATCTGCAG",10,123.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5H A18H F44N I80R A105I G117T",6
"lib2","SARS-CoV-2","AATATCGTCTCAGTAT",6,35.14,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","R16Y N64A P96L A105P P149Q",5
"lib2","SARS-CoV-2","AATATCTAACAAATAT",3,16.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5S R27Y Y121N E141Y T201P",5
"lib2","SARS-CoV-2","AATATCTACTATACGA",4,112.63,8.29,-2.55,0.14,1.72,1.1,0.01,">1 nonsynonymous","F8V V115P Y121P",3
"lib2","SARS-CoV-2","AATATCTATATAGAAG",1,17.33,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","Y50R L57C F167C Q176M",4
"lib2","SARS-CoV-2","AATATCTCGTGCCTGA",13,83.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10M C61Y W106L Y119I",4
"lib2","SARS-CoV-2","AATATCTGAGCTCGGG",2,25.1,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7L N107F F126I",3
"lib2","SARS-CoV-2","AATATCTTCACATCAG",4,22.94,8.94,-1.9,0.27,1.56,1.17,0.02,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","AATATCTTTAAAAACT",5,4.13,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","AATATCTTTCCACGTG",1,24.12,10.8,-0.03,0.08,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATGAAAAATCCAA",12,26.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N13F G86K",2
"lib2","SARS-CoV-2","AATATGAAAAGTAATA",5,16.36,9.84,-0.99,0.06,2.88,1,0,">1 nonsynonymous","N13K L125G K132S",3
"lib2","SARS-CoV-2","AATATGAAAGGCAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","V115L T201*",2
"lib2","SARS-CoV-2","AATATGAAATGAGATG",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48P K198A",2
"lib2","SARS-CoV-2","AATATGAACGTATGAA",6,25.61,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27V I72N P169H",3
"lib2","SARS-CoV-2","AATATGAAGAGATGTG",10,3.72,NA,NA,NA,NA,NA,NA,"stop","N40* F167A",2
"lib2","SARS-CoV-2","AATATGAAGCATACAA",4,165.41,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V11D G166S V182A",3
"lib2","SARS-CoV-2","AATATGACGTACCAGC",10,34.48,6,-4.84,2,3,1.27,0.03,">1 nonsynonymous","I72W A105S",2
"lib2","SARS-CoV-2","AATATGAGGCAGCCCG",14,226.32,10.8,-0.03,0.04,2.9,1.07,0,">1 nonsynonymous","T100F K199N",2
"lib2","SARS-CoV-2","AATATGAGTATAAACT",1,12.65,10.7,-0.13,0.07,2.76,1.26,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATGATACAGTTGT",4,5.91,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15H K87T L95A S113L Y123T",5
"lib2","SARS-CoV-2","AATATGATACCAAATG",2,8.13,10.6,-0.24,0.07,2.97,1.03,0,">1 nonsynonymous","A42H C61A",2
"lib2","SARS-CoV-2","AATATGATACCCTGAC",8,36.39,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12P G83F D97Y I142V",4
"lib2","SARS-CoV-2","AATATGATAGACTACC",13,90.38,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y50K I88F",2
"lib2","SARS-CoV-2","AATATGATAGCCCTAT",5,52.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23P K87M A145D T170L",4
"lib2","SARS-CoV-2","AATATGATATTACGGC",12,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S Y66C F99D E141N F156I",5
"lib2","SARS-CoV-2","AATATGATTACTAAAT",2,24.17,8.86,-1.98,0.38,1.96,1.15,0.06,">1 nonsynonymous","Q84F D98L I142P V153S S200A",5
"lib2","SARS-CoV-2","AATATGCAAAAACAAT",11,42.3,8.05,-2.79,0.31,1.5,1.17,0.03,">1 nonsynonymous","L5V P82V N107G",3
"lib2","SARS-CoV-2","AATATGCCAGCATAGC",11,74.29,8.32,-2.51,0.1,1.64,1.04,0,">1 nonsynonymous","I2G I104S Y143M F156L",4
"lib2","SARS-CoV-2","AATATGCCAGTCCGTG",2,16.31,9.51,-1.33,0.14,2.01,1.18,0.01,">1 nonsynonymous","Y91S S129W",2
"lib2","SARS-CoV-2","AATATGCGATCCGGGC",3,8.31,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","A22T A42C K56T I88S V173K",5
"lib2","SARS-CoV-2","AATATGCGTACTAGAC",5,140.54,9.81,-1.03,0.04,2.76,1.04,0,">1 nonsynonymous","N1G S129C G152C",3
"lib2","SARS-CoV-2","AATATGCGTATACACA",7,6.82,7.11,-3.73,0.61,1.97,1.08,0.04,">1 nonsynonymous","S19K I72Y P133V T148I P177E",5
"lib2","SARS-CoV-2","AATATGGAAACCATAA",11,181.22,10.3,-0.53,0.03,2.83,1.03,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","AATATGGAAATTAGTA",2,97.28,10.52,-0.31,0.04,2.92,1.07,0,">1 nonsynonymous","L38W A190E",2
"lib2","SARS-CoV-2","AATATGGACAAATTGA",2,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R K128V E141C",3
"lib2","SARS-CoV-2","AATATGGAGGCGATTG",2,42.31,8.5,-2.33,0.1,2.01,1.11,0,">1 nonsynonymous","W106R T170F",2
"lib2","SARS-CoV-2","AATATGGCTACTAATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","AATATGGTACAACCCT",12,39.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2L E76F Y93V V153H",4
"lib2","SARS-CoV-2","AATATGTAAATGGATA",6,132.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S108L T148M Y165D",3
"lib2","SARS-CoV-2","AATATGTACCTATACT",2,29.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N13L L60S Y66N V103C",4
"lib2","SARS-CoV-2","AATATGTAGATGCGAA",6,104.71,9.88,-0.95,0.04,2.96,1.07,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","AATATGTCACTCATGA",3,1.4,NA,NA,NA,NA,NA,NA,"stop","K26* L122V Y165P",3
"lib2","SARS-CoV-2","AATATGTCTCCAACCC",3,10.43,9.63,-1.21,0.21,2,1.16,0.02,">1 nonsynonymous","Y91N G152Y",2
"lib2","SARS-CoV-2","AATATGTGTCTTCTGT",4,74.61,10.67,-0.17,0.09,2.92,1.02,0,"1 nonsynonymous","P7M",1
"lib2","SARS-CoV-2","AATATGTTAAGCACTT",2,7.45,7.98,-2.85,0.47,1.5,1,0.07,">1 nonsynonymous","V180E S184G",2
"lib2","SARS-CoV-2","AATATGTTATACACTA",25,49.6,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","F12V V52Q G83K V103R",4
"lib2","SARS-CoV-2","AATATGTTTCCAAGAA",2,5.71,7.36,-3.48,0.54,1.88,1,0.06,">1 nonsynonymous","G51V W106A L183W T201M",4
"lib2","SARS-CoV-2","AATATTAAAATCAGTC",14,211.65,10.87,0.03,0.05,2.89,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AATATTAAAGCTGTTA",6,52.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A42T G51R K94F S108F",4
"lib2","SARS-CoV-2","AATATTAACAAATGTT",4,35.16,9.97,-0.87,0.07,2.04,1.06,0,">1 nonsynonymous","V103T T140A",2
"lib2","SARS-CoV-2","AATATTAACCCACTTT",9,162.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22S Q84S Q176P",3
"lib2","SARS-CoV-2","AATATTAACGCACCTA",1,40.4,10.24,-0.59,0.04,2.99,1,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","AATATTAACTCCGACA",1,5085.7,8.23,-2.6,0.09,2.56,1.02,0,">1 nonsynonymous","N58S Y119K Q163D",3
"lib2","SARS-CoV-2","AATATTAATCCAAATA",8,32.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181Q",1
"lib2","SARS-CoV-2","AATATTAATCCTCGAC",1,19.08,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Q79H F99Y S113V Y178Q",4
"lib2","SARS-CoV-2","AATATTAATCGCTTGG",8,74.5,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","A89S V103G",2
"lib2","SARS-CoV-2","AATATTAATGGTTTAC",2,10.12,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","R25K V37A F47K W106S A145Y",5
"lib2","SARS-CoV-2","AATATTAATTATTAAA",3,34.32,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N58T G101V S108C F134K L162R",5
"lib2","SARS-CoV-2","AATATTACCATAGGGT",8,169.16,10.83,-0.01,0.06,2.85,1.13,0,"1 nonsynonymous","K198H",1
"lib2","SARS-CoV-2","AATATTACGTAACTTA",10,102.27,10.88,0.04,0.06,2.9,1.07,0,">1 nonsynonymous","K114L T201S",2
"lib2","SARS-CoV-2","AATATTACTGAAAAGT",2,14.47,9.46,-1.37,0.16,2.56,1.03,0.01,">1 nonsynonymous","C61T L131C",2
"lib2","SARS-CoV-2","AATATTAGGACTAACA",4,41.66,6.31,-4.52,0.74,1.5,1.21,0.02,">1 nonsynonymous","S19L L60R",2
"lib2","SARS-CoV-2","AATATTAGGCCGATAA",9,6.18,NA,NA,NA,NA,NA,NA,"stop","F70* T170* K198V",3
"lib2","SARS-CoV-2","AATATTAGTCGTATTA",4,1.98,NA,NA,NA,NA,NA,NA,"stop","L5R G83I A89M F99L N130*",5
"lib2","SARS-CoV-2","AATATTATAAAATAGA",4,39.33,9.64,-1.2,0.09,1.9,1.1,0,">1 nonsynonymous","Y91V F134L",2
"lib2","SARS-CoV-2","AATATTATAAGACTTG",5,118.43,10.87,0.04,0.04,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATTATACCCTTAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","N40W Q84T P96* N120L I138Y",5
"lib2","SARS-CoV-2","AATATTATAGAGCATT",2,57.42,10.04,-0.8,0.06,2.85,1.04,0,">1 nonsynonymous","D98C Y143H",2
"lib2","SARS-CoV-2","AATATTATAGGAAAAT",3,11.94,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C49K I88C C102G W106R K114R K132I Y178V",7
"lib2","SARS-CoV-2","AATATTATATGAGTTT",9,5.01,NA,NA,NA,NA,NA,NA,"stop","S36Y L60* I104C G117L Y123R",5
"lib2","SARS-CoV-2","AATATTATCAAAAACC",3,39.67,10.87,0.03,0.05,2.8,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATTATCTTACTAC",1,19.61,10.18,-0.66,0.09,2.91,1.09,0,">1 nonsynonymous","D90N P96S T201K",3
"lib2","SARS-CoV-2","AATATTATTATAAACG",3,15.71,6,-4.84,2,3,1.39,0.02,">1 nonsynonymous","P96N I104Y Y143S",3
"lib2","SARS-CoV-2","AATATTATTTGACGAT",4,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P S19L F99K F185K",4
"lib2","SARS-CoV-2","AATATTCAAGCATACC",4,96.93,10.56,-0.28,0.04,2.93,1.06,0,">1 nonsynonymous","T55S Q84R D98A",3
"lib2","SARS-CoV-2","AATATTCAAGTTTCCT",7,122.9,10.89,0.06,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATTCAGTTGGAAG",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V Y50L D97T Y123M",4
"lib2","SARS-CoV-2","AATATTCCAAGACCAA",10,321.77,10.69,-0.15,0.03,2.95,1.07,0,"1 nonsynonymous","K132M",1
"lib2","SARS-CoV-2","AATATTCCAGCCACAC",11,97.65,9.55,-1.29,0.07,1.77,1.14,0,">1 nonsynonymous","D75H L162V F185L",3
"lib2","SARS-CoV-2","AATATTCCCTACTGTG",1,43.86,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","S69V Y121N R136N Y178S",4
"lib2","SARS-CoV-2","AATATTCCGGCAACAT",4,88.32,10.4,-0.44,0.07,2.75,1.05,0,"1 nonsynonymous","D98F",1
"lib2","SARS-CoV-2","AATATTCCTACTGACA",3,80.84,10.76,-0.08,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATATTCGAGCCCGGC",1,39.13,10.77,-0.06,0.04,2.95,1.07,0,">1 nonsynonymous","K128V K198P",2
"lib2","SARS-CoV-2","AATATTCGCAAATAAC",5,36.7,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","K26L S43D C61R F99P N120E S129L",6
"lib2","SARS-CoV-2","AATATTCGCCACAAGT",1,2.41,NA,NA,NA,NA,NA,NA,"stop","S41V L60* G86R",3
"lib2","SARS-CoV-2","AATATTCGGATTTATG",8,193.62,10.59,-0.25,0.03,2.96,1.02,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","AATATTCGGCTATCAA",2,62.54,10.54,-0.3,0.07,2.94,1.02,0,">1 nonsynonymous","T3A G83L",2
"lib2","SARS-CoV-2","AATATTCGTGGACCAT",8,4.93,NA,NA,NA,NA,NA,NA,"stop","P7* N40L Y93P",3
"lib2","SARS-CoV-2","AATATTCGTTGCGTTG",33,324.92,10.71,-0.12,0.04,2.93,1.06,0,"1 nonsynonymous","F185L",1
"lib2","SARS-CoV-2","AATATTCTAAAGAACT",2,30.85,6.01,-4.83,0.87,1.5,1.13,0.01,">1 nonsynonymous","F47N G51V P149R L162V",4
"lib2","SARS-CoV-2","AATATTCTAAGACTGG",1,14.78,9.34,-1.49,0.17,1.95,1.03,0.01,">1 nonsynonymous","N40Y A89S P133S",3
"lib2","SARS-CoV-2","AATATTGAAAATATAT",5,3.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23L",1
"lib2","SARS-CoV-2","AATATTGAAGGGAGTT",4,60.3,9.17,-1.66,0.07,2.65,1.13,0,">1 nonsynonymous","D98M Y143L",2
"lib2","SARS-CoV-2","AATATTGACATCAACG",1,69.33,NA,NA,NA,NA,NA,NA,"stop","F12Y Y121*",2
"lib2","SARS-CoV-2","AATATTGACGTTGTAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180N",1
"lib2","SARS-CoV-2","AATATTGAGCCGCTAG",1,18.95,9.87,-0.97,0.13,2.88,1.01,0.01,">1 nonsynonymous","C6V G155K",2
"lib2","SARS-CoV-2","AATATTGCAATTTGGC",7,81.64,8.7,-2.13,0.06,2.98,1.05,0,">1 nonsynonymous","G9W S41L G166M",3
"lib2","SARS-CoV-2","AATATTGCCCTATACT",8,169.68,10.63,-0.21,0.04,2.94,1.06,0,">1 nonsynonymous","L5Y T15A",2
"lib2","SARS-CoV-2","AATATTGCTACGCAAA",7,25.85,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","G51W T100H V103D D112K T201A",5
"lib2","SARS-CoV-2","AATATTGGAATTTCGC",7,71.43,7.35,-3.49,0.35,1.5,1.06,0.04,">1 nonsynonymous","I2F E10A V71E",3
"lib2","SARS-CoV-2","AATATTGGGCACCCCA",1,57.53,9.22,-1.62,0.11,1.81,1.12,0,">1 nonsynonymous","S36Y N92S",2
"lib2","SARS-CoV-2","AATATTGGGGAAGTTA",3,224.57,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F99A G116D",2
"lib2","SARS-CoV-2","AATATTGGTCTCACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S53L D68* R73A R136V Q144G T201E",6
"lib2","SARS-CoV-2","AATATTGGTTGCAAAA",2,21.54,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I80L V103T F126I Y159R",4
"lib2","SARS-CoV-2","AATATTGTACGACCTT",1,24.26,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L60F R124F",2
"lib2","SARS-CoV-2","AATATTGTATCCGATA",22,234.25,7.84,-3,0.12,2.37,1.1,0.01,">1 nonsynonymous","S29T C158S",2
"lib2","SARS-CoV-2","AATATTGTGAATCTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","P7Y N92W D137M V182*",4
"lib2","SARS-CoV-2","AATATTGTGGAGAAAG",2,41.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N107R Y119V Y165K P177N",4
"lib2","SARS-CoV-2","AATATTGTTGTAGCCG",3,30.2,10.84,0,0.09,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AATATTTAAACCGGCA",8,48.6,7.33,-3.51,0.4,1.5,1.18,0.05,">1 nonsynonymous","S53L A81T Y93F",3
"lib2","SARS-CoV-2","AATATTTAATTACAAA",11,87.66,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T15M V37L F99L V103C",4
"lib2","SARS-CoV-2","AATATTTAGTAGTTGA",1,30.58,10.71,-0.13,0.04,3,1.03,0,">1 nonsynonymous","R16W L122W",2
"lib2","SARS-CoV-2","AATATTTATGATTACA",5,64.09,10.06,-0.77,0.08,2.39,1.09,0,">1 nonsynonymous","D34N E135N",2
"lib2","SARS-CoV-2","AATATTTCAGAGGAAT",6,15.72,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N13T D98G R179M",3
"lib2","SARS-CoV-2","AATATTTCCACAACAA",2,14.74,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","K94T F99I N120D Y121G N151V T201S",6
"lib2","SARS-CoV-2","AATATTTCCATCTTAA",5,72.93,10.7,-0.14,0.07,2.85,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AATATTTCTAGTCTGA",7,28.15,NA,NA,NA,NA,NA,NA,"stop","A14M T46* N92S E141Q",4
"lib2","SARS-CoV-2","AATATTTCTGAGTATG",2,2.29,NA,NA,NA,NA,NA,NA,"stop","R27* N120G V173A",3
"lib2","SARS-CoV-2","AATATTTGAACCAACT",4,35.62,9.9,-0.94,0.12,2.42,1.12,0.01,">1 nonsynonymous","Y35P A105T L187P",3
"lib2","SARS-CoV-2","AATATTTGAACCCCAT",2,78.29,9.79,-1.05,0.09,2.05,1.06,0,">1 nonsynonymous","S29R A105F",2
"lib2","SARS-CoV-2","AATATTTGATTGAGAT",1,37.17,10.33,-0.5,0.06,2.9,1.04,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","AATATTTGTACAGTCT",7,20.26,8.53,-2.31,0.23,1.5,1.14,0.03,">1 nonsynonymous","A14R F44A T85K R136S",4
"lib2","SARS-CoV-2","AATATTTTAATGGTTT",5,105.19,8.39,-2.45,0.17,2.4,1.11,0.01,">1 nonsynonymous","K56Q R127H G166R",3
"lib2","SARS-CoV-2","AATATTTTAGCTGTCT",6,81.37,10.36,-0.47,0.05,2.92,1.04,0,">1 nonsynonymous","S129G Y178V",2
"lib2","SARS-CoV-2","AATATTTTCACTGCAA",10,104.38,8.49,-2.34,0.09,2.85,1.04,0,">1 nonsynonymous","N130F Y175Q",2
"lib2","SARS-CoV-2","AATATTTTGGATCAGT",1,12.82,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","AATATTTTGGCAGACC",9,74.73,10.64,-0.19,0.04,2.95,1.04,0,">1 nonsynonymous","N1E A22C",2
"lib2","SARS-CoV-2","AATATTTTGTGGCACT",5,1.09,NA,NA,NA,NA,NA,NA,"stop","C49* P133G",2
"lib2","SARS-CoV-2","AATATTTTTAGAACTC",10,39.25,10.77,-0.07,0.05,2.98,1.04,0,">1 nonsynonymous","R16N K128V G146S",3
"lib2","SARS-CoV-2","AATATTTTTGAATAGG",6,3.69,NA,NA,NA,NA,NA,NA,"stop","T15H F44H L60* N107E S139Q G146A",6
"lib2","SARS-CoV-2","AATCAAAAAACACACG",3,72.53,6,-4.84,1.68,1.5,1.27,0.03,">1 nonsynonymous","G9V D59V A81L G86D",4
"lib2","SARS-CoV-2","AATCAAAAAATCCATG",3,62.6,10.06,-0.78,0.06,2.54,1.01,0,"1 nonsynonymous","L95C",1
"lib2","SARS-CoV-2","AATCAAAAAGTGGTCT",14,140.69,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9S A14K N30E F99L S139C F156H Y165F",7
"lib2","SARS-CoV-2","AATCAAAAATCCGGGA",4,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101P I104T P149K",3
"lib2","SARS-CoV-2","AATCAAAAATGGTAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T S108H Y119S G146H",4
"lib2","SARS-CoV-2","AATCAAAACAGACTTC",2,14.9,10.27,-0.57,0.09,2.77,1,0,">1 nonsynonymous","F8I F134L T140S",3
"lib2","SARS-CoV-2","AATCAAAACCTAATAA",9,109.8,10.28,-0.56,0.04,3,1.03,0,">1 nonsynonymous","S43T K87Q",2
"lib2","SARS-CoV-2","AATCAAAACTATTGAA",5,72.46,8.78,-2.06,0.11,1.91,1.07,0,">1 nonsynonymous","Y35R T140V P169Q",3
"lib2","SARS-CoV-2","AATCAAAACTCCAAGT",4,6.98,7.78,-3.06,0.45,2.52,1.18,0.03,">1 nonsynonymous","F44V C49S D90A V103R N171R",5
"lib2","SARS-CoV-2","AATCAAAATATTTGTA",4,119.03,9.28,-1.56,0.04,2.85,1.12,0,"1 nonsynonymous","G117V",1
"lib2","SARS-CoV-2","AATCAAAATGTTACTA",13,186.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38H L131K",2
"lib2","SARS-CoV-2","AATCAAACAGAATAGT",2,26.23,10.43,-0.41,0.09,2.93,1.02,0,">1 nonsynonymous","A42N G155A A192L",3
"lib2","SARS-CoV-2","AATCAAACCCGAACCA",2,11.29,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","A14W Y35I L60V I104K",4
"lib2","SARS-CoV-2","AATCAAACGGGTTTGA",18,246.03,10.83,-0.01,0.04,2.93,1.06,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","AATCAAACTACTAAGC",2,8.26,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6Y F99E S139D",3
"lib2","SARS-CoV-2","AATCAAACTTATTACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Y50S D59Y V103* G146E",4
"lib2","SARS-CoV-2","AATCAAAGAACTGAGC",2,16.55,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T55F Y93L N151L",3
"lib2","SARS-CoV-2","AATCAAAGCCGAAAAT",2,10.69,6.79,-4.04,0.55,1.5,1.03,0.04,">1 nonsynonymous","G9K F99T",2
"lib2","SARS-CoV-2","AATCAAAGGGTTACAG",6,80.71,9.63,-1.21,0.07,2.86,1,0,"1 nonsynonymous","N118F",1
"lib2","SARS-CoV-2","AATCAAAGTAGGCTGT",1,13.4,10.71,-0.13,0.1,2.96,1.07,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","AATCAAATACCTAATA",8,187.31,10.62,-0.22,0.02,2.94,1.05,0,"1 nonsynonymous","I138P",1
"lib2","SARS-CoV-2","AATCAAATATAATCCG",1,0.17,NA,NA,NA,NA,NA,NA,"stop","S41* D59F I72F D90R",4
"lib2","SARS-CoV-2","AATCAAATCAATGGAG",3,47.45,10.77,-0.07,0.07,2.91,1.11,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","AATCAAATCCCTGACT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S Y93A S113Q T170I",4
"lib2","SARS-CoV-2","AATCAAATTACTCATA",6,133.08,6,-4.84,2,3,1.17,0,">1 nonsynonymous","E10N F17V N30R V37A L95G N107P G166Q Y175D",8
"lib2","SARS-CoV-2","AATCAAATTCAATAGT",1,8.13,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G9S N13Y G83V K94V T201N",5
"lib2","SARS-CoV-2","AATCAAATTCATTTTT",2,21.16,6,-4.84,2,1.5,1.39,0.05,">1 nonsynonymous","C102Y V153G P177S",3
"lib2","SARS-CoV-2","AATCAAATTGTGCGTT",1,1.53,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATCAAATTTACAAGA",4,42.5,9.21,-1.63,0.07,2.9,1.06,0,">1 nonsynonymous","T3F R73T L125A",3
"lib2","SARS-CoV-2","AATCAACAATAATGCA",3,42.36,9.98,-0.86,0.05,2.91,1.04,0,">1 nonsynonymous","V173D Y178S",2
"lib2","SARS-CoV-2","AATCAACAATACAACA",2,72.23,10.82,-0.01,0.08,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCAACAGAACAGCC",2,30.11,9.37,-1.47,0.09,2,1.1,0,">1 nonsynonymous","V37S K56I F99L K114Q",4
"lib2","SARS-CoV-2","AATCAACCACGATTCT",1,3.34,NA,NA,NA,NA,NA,NA,"stop","F8E K56Q G86C L95* G101V",5
"lib2","SARS-CoV-2","AATCAACCGAAATTAA",7,115.71,10.74,-0.1,0.05,2.89,1.12,0,">1 nonsynonymous","E10D E141Q",2
"lib2","SARS-CoV-2","AATCAACCGCTAAGGA",7,101.63,6,-4.84,2,3,1.18,0,">1 nonsynonymous","I2M F17S Y50T Y119S T148P",5
"lib2","SARS-CoV-2","AATCAACCGTGCGCGA",2,78.3,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R16L P177M",2
"lib2","SARS-CoV-2","AATCAACGAGCCCCCA",1,14.72,7.84,-2.99,0.38,1.5,1.07,0.05,">1 nonsynonymous","I2Q E10A T55A L57S T148L Y178V",6
"lib2","SARS-CoV-2","AATCAACGCGAACCGA",6,79.51,9.53,-1.31,0.04,2.25,1.07,0,">1 nonsynonymous","R27G I104V G116S",3
"lib2","SARS-CoV-2","AATCAACGCTTAACAC",5,10.54,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3N S41D Y50K F99L",4
"lib2","SARS-CoV-2","AATCAACTCTTCACCA",3,17.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F99P K199C",2
"lib2","SARS-CoV-2","AATCAACTGAGTCGAG",5,38.37,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","F44A Y93P Y119W",3
"lib2","SARS-CoV-2","AATCAACTGTGTATAT",9,70.95,8.3,-2.53,0.23,1.5,1.11,0.02,">1 nonsynonymous","N4L T46V S69L L122R T140R",5
"lib2","SARS-CoV-2","AATCAACTTAAACAAG",9,43.3,10.66,-0.18,0.02,2.99,1.03,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","AATCAAGAACTAACAT",5,41.11,6.82,-4.02,0.43,1.5,1.19,0.03,">1 nonsynonymous","L5W F12D D97Q T170S",4
"lib2","SARS-CoV-2","AATCAAGACTTCCGGT",9,183.25,6.19,-4.65,0.61,1.5,1.22,0.01,">1 nonsynonymous","Y39N K56C S69I",3
"lib2","SARS-CoV-2","AATCAAGAGGAATTCT",11,188.97,10.75,-0.09,0.04,2.93,1.06,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","AATCAAGATGTACTAA",4,65.87,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F44L L60C A105L L111Q K128S G166P",6
"lib2","SARS-CoV-2","AATCAAGCCCCGTAAA",14,157.7,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S53F A81Y Y119L",3
"lib2","SARS-CoV-2","AATCAAGCCTCCCAAC",2,13.26,10.81,-0.03,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCAAGCCTGTACCA",6,42.8,8.39,-2.45,0.18,2,1.09,0.01,">1 nonsynonymous","A67S K87E E141N",3
"lib2","SARS-CoV-2","AATCAAGCTGAATTTT",2,6.08,10.64,-0.2,0.3,2.68,1,0.02,">1 nonsynonymous","S41T A81G T140G",3
"lib2","SARS-CoV-2","AATCAAGGATAGCTGG",5,13.78,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L187S",1
"lib2","SARS-CoV-2","AATCAAGGCTTGAAAA",2,9.72,9.97,-0.87,0.17,2.59,1,0.02,"1 nonsynonymous","D34M",1
"lib2","SARS-CoV-2","AATCAAGTAAATAAAT",1,34.88,8.5,-2.33,0.11,2.9,1.01,0.01,">1 nonsynonymous","L122K A145S Y175R",3
"lib2","SARS-CoV-2","AATCAAGTATATCAAA",3,1.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116L",1
"lib2","SARS-CoV-2","AATCAAGTCCATACCA",13,464.05,10.83,-0.01,0.03,2.96,1.06,0,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","AATCAAGTGGTATTAT",3,64.05,8.59,-2.25,0.08,2.96,1.07,0,">1 nonsynonymous","I88V G166W",2
"lib2","SARS-CoV-2","AATCAAGTTAAGATGG",9,25.54,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","AATCAATAAATCAGCA",10,39.31,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","I2K P82Q G101N L122P Q168E",5
"lib2","SARS-CoV-2","AATCAATAAGGTGACC",3,39.25,9.16,-1.68,0.17,1.5,1.18,0.01,">1 nonsynonymous","N92A N110Y",2
"lib2","SARS-CoV-2","AATCAATACTGATGCC",4,164.15,10.25,-0.59,0.02,2.94,1.04,0,">1 nonsynonymous","Y119R Q168S",2
"lib2","SARS-CoV-2","AATCAATATAAAATAG",1,12.28,10.8,-0.04,0.07,2.98,1.03,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","AATCAATATCGATTCT",7,17.1,6.83,-4.01,0.22,1.62,1.2,0.01,">1 nonsynonymous","N30H C61K E76R S129G",4
"lib2","SARS-CoV-2","AATCAATCACACACTT",4,62.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L38S D112K R136Y",3
"lib2","SARS-CoV-2","AATCAATCCTCCGCAT",3,108.35,10.14,-0.69,0.05,2.7,1.07,0,">1 nonsynonymous","T3R C61G T140L",3
"lib2","SARS-CoV-2","AATCAATGAAATAAGA",1,12.06,8.23,-2.6,0.16,2.13,1.07,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","AATCAATGAGCGCTTC",5,11.58,7.17,-3.67,0.39,1.5,1.21,0.03,">1 nonsynonymous","Y50E I88N",2
"lib2","SARS-CoV-2","AATCAATGGGTATTGT",4,101.87,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C61T N157A V173F G174V",4
"lib2","SARS-CoV-2","AATCAATTATGAGTGG",1,62.47,10.1,-0.73,0.07,2.72,1.16,0,">1 nonsynonymous","K48V E135T",2
"lib2","SARS-CoV-2","AATCAATTTTAACACA",2,17.21,6,-4.84,2,3,1.08,0,">1 nonsynonymous","W23R D90F K199I",3
"lib2","SARS-CoV-2","AATCAATTTTTGAATA",4,21.19,6,-4.84,2,1.5,1.41,0.04,">1 nonsynonymous","E10C V71I D90S R127I",4
"lib2","SARS-CoV-2","AATCACAAACAGAGTA",1,0.53,NA,NA,NA,NA,NA,NA,"stop","N1S C49Q I80Q A81S N110* N120E",6
"lib2","SARS-CoV-2","AATCACAAAGGCCCAG",5,83.94,10.8,-0.03,0.05,2.95,1.07,0,">1 nonsynonymous","S41T N151K",2
"lib2","SARS-CoV-2","AATCACAACAATATTA",3,98.7,10.78,-0.06,0.04,2.99,1.04,0,"1 nonsynonymous","S129N",1
"lib2","SARS-CoV-2","AATCACAACAATTCGA",3,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C P96R S139P P197T",4
"lib2","SARS-CoV-2","AATCACAAGACTGAGC",7,47.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65R A105F S129E",3
"lib2","SARS-CoV-2","AATCACAGAAACTTAT",10,129.4,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T55E G74E P82S T85H G117A S147P Q176T",7
"lib2","SARS-CoV-2","AATCACAGAACGTAAA",4,17.01,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","P82N P161L Q168D",3
"lib2","SARS-CoV-2","AATCACAGAATGGAAG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","C61I A81Y K87A F99* Y121A G155A T170L Q176W",8
"lib2","SARS-CoV-2","AATCACAGCAATAGAT",10,63.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3V T100C N107F V115S P169V",5
"lib2","SARS-CoV-2","AATCACAGCCCGCATA",15,97.73,9.74,-1.1,0.06,1.95,1.08,0,">1 nonsynonymous","K56R F99H",2
"lib2","SARS-CoV-2","AATCACATAAAATTAA",1,12.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4F Y35K S43Y F99C N157K",5
"lib2","SARS-CoV-2","AATCACATGTGTCTTT",1,0.96,NA,NA,NA,NA,NA,NA,"stop","G83K T148*",2
"lib2","SARS-CoV-2","AATCACATTTGTTGCT",5,187.93,10.75,-0.09,0.03,2.97,1.04,0,"1 nonsynonymous","F134M",1
"lib2","SARS-CoV-2","AATCACCAAAAAAAAA",12,121.94,10.02,-0.82,0.05,2.77,1.06,0,">1 nonsynonymous","V37L C61T E135V",3
"lib2","SARS-CoV-2","AATCACCAAGGGGGTA",16,447.76,NA,NA,NA,NA,NA,NA,"stop","K48* F70* V77L",3
"lib2","SARS-CoV-2","AATCACCCCACAGAAG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","I2V I28* W106L T201*",4
"lib2","SARS-CoV-2","AATCACCCGTAATACG",4,12.86,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44I I72A V180S",3
"lib2","SARS-CoV-2","AATCACCGACAGATAA",9,296.95,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S41R N120L K128I F160R Y175L",5
"lib2","SARS-CoV-2","AATCACCGCATTGATT",15,43.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15Y D59G N92A",3
"lib2","SARS-CoV-2","AATCACCGTACCTGAC",1,30.95,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N64P N107I V115Q P133K",4
"lib2","SARS-CoV-2","AATCACCGTCGTTTAT",3,130.8,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10T N107Y R179T",3
"lib2","SARS-CoV-2","AATCACCTACTCAGAA",5,115.45,10.77,-0.06,0.09,2.45,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCACGCATCGCTAA",7,40.47,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V37R Y50N Y123V L183A",4
"lib2","SARS-CoV-2","AATCACGCGCTAGCCT",10,45.73,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G9T G51W G146L K199Q",4
"lib2","SARS-CoV-2","AATCACGCTCCCACCT",10,136.02,6,-4.84,1.04,1.5,1.24,0.02,">1 nonsynonymous","Y21G T63E K114A S164W V173Q",5
"lib2","SARS-CoV-2","AATCACGCTGCATAAG",3,13.99,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","W106P E141V",2
"lib2","SARS-CoV-2","AATCACGTACCTGGTC",2,41.71,9.89,-0.95,0.14,2.61,1.08,0.01,">1 nonsynonymous","G9L G116I",2
"lib2","SARS-CoV-2","AATCACGTACTAGTGA",7,161.75,10.11,-0.73,0.04,2.82,1,0,">1 nonsynonymous","A42G S139C G146A",3
"lib2","SARS-CoV-2","AATCACGTCAGTGATA",3,18.34,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F44C Q84P N110L",3
"lib2","SARS-CoV-2","AATCACGTGGCAAATC",3,47.56,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Q79E F99G N107C",3
"lib2","SARS-CoV-2","AATCACGTGGCAGATG",2,9.87,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","T55L A105R S129E G152D Y165V",5
"lib2","SARS-CoV-2","AATCACGTTACTAGTG",4,24.02,9.54,-1.3,0.17,1.55,1.1,0.01,">1 nonsynonymous","S41C F99I",2
"lib2","SARS-CoV-2","AATCACTAACCATCAA",14,342.11,10.11,-0.73,0.04,2.6,1.06,0,">1 nonsynonymous","G146Y Q163L",2
"lib2","SARS-CoV-2","AATCACTATCTTTCAT",1,0.34,NA,NA,NA,NA,NA,NA,"stop","S41M C61R I88H N107* Q168A",5
"lib2","SARS-CoV-2","AATCACTATGCGACAT",4,40.59,10.77,-0.07,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCACTCAATTGTAA",2,31.09,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","AATCACTCTACACAAG",3,74.16,10.58,-0.25,0.04,2.91,1.11,0,">1 nonsynonymous","A89V L122S",2
"lib2","SARS-CoV-2","AATCACTGAACAGGGA",3,7.8,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","F47V Y91P C150W C158T",4
"lib2","SARS-CoV-2","AATCACTGAATTAATT",10,150.62,10.84,0.01,0.04,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCAGAAAAGGCGAA",4,7.12,9.74,-1.1,0.11,3,1.05,0,">1 nonsynonymous","K87F T140V F156K",3
"lib2","SARS-CoV-2","AATCAGAATCTCCAAT",2,12.41,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V20M N64R L95G G117S K128C T148F",6
"lib2","SARS-CoV-2","AATCAGAATTACAATG",6,44.72,10.52,-0.31,0.05,3,1,0,">1 nonsynonymous","T15D S147I",2
"lib2","SARS-CoV-2","AATCAGACAAATTTAG",4,10.56,6.98,-3.86,0.3,1.5,1.11,0.03,">1 nonsynonymous","A89K P149L",2
"lib2","SARS-CoV-2","AATCAGACAGCTAAAG",4,79.97,9.28,-1.55,0.05,2.8,1.06,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","AATCAGACATATTCAA",15,38.24,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S41V G86M K94S N120T E154H",5
"lib2","SARS-CoV-2","AATCAGACTACATATG",2,86.21,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C49M I104L N110A Y178I",4
"lib2","SARS-CoV-2","AATCAGAGTACATTGG",9,59.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4L P82H Y119A F185T",4
"lib2","SARS-CoV-2","AATCAGATCCATAGAA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V D98I Q144C",3
"lib2","SARS-CoV-2","AATCAGATTCATCACA",1,58.69,10.16,-0.68,0.07,2.76,1.11,0,">1 nonsynonymous","N92S L122R E186W",3
"lib2","SARS-CoV-2","AATCAGATTTCGACAC",1,5.4,10.74,-0.09,0.03,3,1,0,"1 nonsynonymous","N151F",1
"lib2","SARS-CoV-2","AATCAGCAACATTTGT",15,87.84,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89D K94R G116Y K128C Q168L",5
"lib2","SARS-CoV-2","AATCAGCACAAAAAGT",1,7.31,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","A14W S19Y T85L D112C T148S",5
"lib2","SARS-CoV-2","AATCAGCATTTATATT",1,13.4,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","L60T V65I E76S K128L S147G E154L",6
"lib2","SARS-CoV-2","AATCAGCCAAGCTCAA",9,82.06,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V32F I138Y V181K",3
"lib2","SARS-CoV-2","AATCAGCGGAAGTTAG",3,74.73,9.88,-0.95,0.08,2.84,1.04,0,">1 nonsynonymous","Y91F I142C",2
"lib2","SARS-CoV-2","AATCAGCGTACCCCCA",4,57.9,10.66,-0.17,0.03,2.99,1.03,0,">1 nonsynonymous","N4A N64L",2
"lib2","SARS-CoV-2","AATCAGGAAGAAATCT",4,45.24,10.58,-0.26,0.07,2.92,1.08,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","AATCAGGGTACACCCA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y W23F D34L F99N A105S K114W N120P",7
"lib2","SARS-CoV-2","AATCAGGTTCTGAATA",6,58.47,10.48,-0.35,0.07,2.91,1.12,0,"1 nonsynonymous","T148C",1
"lib2","SARS-CoV-2","AATCAGTCACTCCCTT",3,9.78,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","Y121G N157F",2
"lib2","SARS-CoV-2","AATCAGTCTGGTCACA",3,34.16,10.76,-0.07,0.04,2.99,1.03,0,"1 nonsynonymous","T148D",1
"lib2","SARS-CoV-2","AATCAGTCTTTACAAG",9,47.29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A67S D90L T148L Y165L",4
"lib2","SARS-CoV-2","AATCAGTTACTCATAC",14,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102M",1
"lib2","SARS-CoV-2","AATCAGTTGGCCACCA",10,185.55,10.8,-0.04,0.03,2.97,1.04,0,">1 nonsynonymous","I104F P149M",2
"lib2","SARS-CoV-2","AATCATAAAACCACAG",5,24.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D34V N92R T100D",3
"lib2","SARS-CoV-2","AATCATAAAGACTACG",2,26.07,6.23,-4.61,0.6,1.5,1.13,0.01,">1 nonsynonymous","S41K D68R F99D P161V",4
"lib2","SARS-CoV-2","AATCATAAAGCGACCA",1,73.8,10.9,0.06,0.06,2.91,1.12,0,">1 nonsynonymous","S36D T140S",2
"lib2","SARS-CoV-2","AATCATAAGAGTAAGT",2,51.35,9.62,-1.21,0.11,1.9,1.02,0.01,">1 nonsynonymous","T15N N58M C102I",3
"lib2","SARS-CoV-2","AATCATAATTAATTCA",8,34.96,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9Q K48G Q84T W106Q N118M P197T",6
"lib2","SARS-CoV-2","AATCATACAAACACAC",5,56.18,10.8,-0.04,0.05,2.94,1.07,0,">1 nonsynonymous","A22K A190E",2
"lib2","SARS-CoV-2","AATCATACAAATCATT",5,9.12,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C6L T15L G155C V173G V180F",5
"lib2","SARS-CoV-2","AATCATACCGTAAAAC",5,89.82,10.88,0.04,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCATACCGTATCTA",1,0.5,NA,NA,NA,NA,NA,NA,"stop","L188*",1
"lib2","SARS-CoV-2","AATCATACTAATAGCA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","D34L S41K K128* S139P",4
"lib2","SARS-CoV-2","AATCATACTAGAACCT",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I P54L D112F G117A A145L K198A",6
"lib2","SARS-CoV-2","AATCATACTCTTATTT",4,69.93,10.85,0.01,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCATAGAAAAAATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","AATCATAGGGATTAGA",3,100.46,9.68,-1.15,0.04,2.73,1.08,0,">1 nonsynonymous","K56L G155F",2
"lib2","SARS-CoV-2","AATCATATAACTACAA",2,49.82,10.39,-0.45,0.05,2.92,1.05,0,">1 nonsynonymous","G9S D98N P149G G155A",4
"lib2","SARS-CoV-2","AATCATATAATTATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y L122M S129V",3
"lib2","SARS-CoV-2","AATCATATACTCAAGC",18,332.33,9.27,-1.57,0.05,2.87,1.09,0,">1 nonsynonymous","Y119V K132T",2
"lib2","SARS-CoV-2","AATCATATGAATATCA",6,77.61,10.56,-0.28,0.04,2.93,1.06,0,">1 nonsynonymous","S53L L60M V173F G196S",4
"lib2","SARS-CoV-2","AATCATATTAATCCCC",1,21.65,9.95,-0.89,0.08,2.79,1.04,0,">1 nonsynonymous","L5G N40I T201C",3
"lib2","SARS-CoV-2","AATCATCAAACTCGCG",6,28.27,9.75,-1.09,0.05,2.98,1.01,0,">1 nonsynonymous","K56R T170F",2
"lib2","SARS-CoV-2","AATCATCAATGACGAT",6,113.08,10.88,0.05,0.06,2.8,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCATCACAAGGCCA",2,7.59,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F17R C61L F99Q",3
"lib2","SARS-CoV-2","AATCATCAGAGTAGCA",5,63.35,10.73,-0.11,0.04,2.89,1.11,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AATCATCCATAACCAT",11,145.9,8.12,-2.71,0.22,1.5,1.02,0.02,">1 nonsynonymous","F12R N40H T140F",3
"lib2","SARS-CoV-2","AATCATCCCATCCTAC",3,5.86,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","Y93K A105N S164D",3
"lib2","SARS-CoV-2","AATCATCCCATCGTGA",7,92.58,10.77,-0.07,0.03,2.95,1.07,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","AATCATCCGAGAGGCC",3,34.75,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","W106L C158D",2
"lib2","SARS-CoV-2","AATCATCCGTATGTCA",7,15.72,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7T T46C D68R K87R R136E Q168S L183S",7
"lib2","SARS-CoV-2","AATCATCGAACAAAGC",15,189.11,6.68,-4.16,0.11,1.5,1.12,0,"1 nonsynonymous","C158G",1
"lib2","SARS-CoV-2","AATCATCTAAATAGTC",6,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I T15N S41C K56S K94C",5
"lib2","SARS-CoV-2","AATCATCTAACAGTAC",3,1.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATCATCTAAGCAGAG",1,10.42,10.49,-0.34,0.05,2.94,1.05,0,">1 nonsynonymous","T140R S164F",2
"lib2","SARS-CoV-2","AATCATCTGGGGTCAA",15,5.73,NA,NA,NA,NA,NA,NA,"stop","F12S S53P S184*",3
"lib2","SARS-CoV-2","AATCATGAAAATGTAC",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y V77L I88V K94L",4
"lib2","SARS-CoV-2","AATCATGAATCCAATT",2,5.77,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L60N I104K L188Y",3
"lib2","SARS-CoV-2","AATCATGAGGTGCGGG",6,239.16,9.46,-1.38,0.03,2.83,1.06,0,">1 nonsynonymous","N30R T63Y G166S",3
"lib2","SARS-CoV-2","AATCATGATCACTAAT",10,206.56,10.15,-0.68,0.03,2.97,1.03,0,">1 nonsynonymous","G155T V180I",2
"lib2","SARS-CoV-2","AATCATGATGTCCTAC",5,0.1,NA,NA,NA,NA,NA,NA,"stop","I72S N92Y N107R K128*",4
"lib2","SARS-CoV-2","AATCATGCAAGAGTAG",4,28.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5C N92I W106K K132R S139R Y165N",6
"lib2","SARS-CoV-2","AATCATGCCAAAACAA",5,42.79,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L5E S53L S69W T85N W106A G174Y",6
"lib2","SARS-CoV-2","AATCATGCCAGTTGAA",2,24.62,8.7,-2.13,0.12,2.19,1.1,0.01,">1 nonsynonymous","D90Y N118Y",2
"lib2","SARS-CoV-2","AATCATGCGTACTTTC",2,6.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K87L P177W C195R",4
"lib2","SARS-CoV-2","AATCATGCTTTAACAG",10,180.01,10.2,-0.64,0.08,2.35,1.02,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","AATCATGGAGGAGATA",3,9.79,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","R25L F44S K94E D137G A145I V173R",6
"lib2","SARS-CoV-2","AATCATGGCAGGCATT",1,0.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","AATCATGGTCTTTAGA",8,101.53,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D34G P149M P161T L162I F167G",5
"lib2","SARS-CoV-2","AATCATGTACCACCAA",9,1.31,NA,NA,NA,NA,NA,NA,"stop","F17Q L38E C102* F134H",4
"lib2","SARS-CoV-2","AATCATGTCCACAAAA",2,12.19,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","W23G Y66L G86S Y91D D112C K132N K199Y",7
"lib2","SARS-CoV-2","AATCATTAACAGATGG",1,46.52,10.74,-0.1,0.05,2.98,1.02,0,"1 nonsynonymous","T15R",1
"lib2","SARS-CoV-2","AATCATTACGATTGCA",1,8.26,8.64,-2.2,0.16,2.88,1.15,0,">1 nonsynonymous","G117F H189L T201D",3
"lib2","SARS-CoV-2","AATCATTCCGTCAACA",2,23.61,10.75,-0.08,0.08,2.9,1.15,0,"1 nonsynonymous","T85E",1
"lib2","SARS-CoV-2","AATCATTTAATGAGCA",5,38.12,6,-4.84,1.38,1.5,1.18,0.02,">1 nonsynonymous","C49G F99H T148P",3
"lib2","SARS-CoV-2","AATCATTTTACAGGTA",13,17.85,6.27,-4.57,0.68,3,1.16,0.01,">1 nonsynonymous","T3K S41F P96M F126S",4
"lib2","SARS-CoV-2","AATCCAAAAAGTCGAT",10,402.92,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","V37N D98F S129F Y165S",4
"lib2","SARS-CoV-2","AATCCAAAACGGGAAA",7,1.42,NA,NA,NA,NA,NA,NA,"stop","S53R L95E I104L G146* C150M",5
"lib2","SARS-CoV-2","AATCCAAAAGTTGAGA",2,5.28,NA,NA,NA,NA,NA,NA,"stop","V77* W106M Y121L",3
"lib2","SARS-CoV-2","AATCCAAACCGGATAT",8,113.36,9.44,-1.4,0.07,2.72,1.14,0,">1 nonsynonymous","A33M K87R N120A K128S N151V G174K",6
"lib2","SARS-CoV-2","AATCCAAAGAACATTC",10,110.35,6,-4.84,2,1.5,1.25,0.02,"1 nonsynonymous","Y178G",1
"lib2","SARS-CoV-2","AATCCAAAGCTGTTAA",3,107.12,10.11,-0.73,0.04,2.91,1.04,0,"1 nonsynonymous","N118M",1
"lib2","SARS-CoV-2","AATCCAAAGGGCTTAT",6,1.35,NA,NA,NA,NA,NA,NA,"stop","F12* S53L N120F I138N P161R",5
"lib2","SARS-CoV-2","AATCCAACAATTTCGA",6,26.92,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A14L C61M Q84K L95M Y119M L162A",6
"lib2","SARS-CoV-2","AATCCAACCATCGTAA",10,80.27,10.74,-0.09,0.04,2.93,1.08,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","AATCCAACGAACCCCA",17,5.33,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2N A42I T63P V173A",4
"lib2","SARS-CoV-2","AATCCAACTCGACTAA",3,38.58,10.64,-0.2,0.06,2.8,1.21,0,">1 nonsynonymous","T15E V37G V115L",3
"lib2","SARS-CoV-2","AATCCAACTGTTATTG",1,25.22,6,-4.84,2,3,1.06,0,">1 nonsynonymous","E10T Y50L Y93E A105Y N120T Y178Q",6
"lib2","SARS-CoV-2","AATCCAAGAAATACCT",2,41.62,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L125R Y175M",2
"lib2","SARS-CoV-2","AATCCAAGCGAATATA",4,14.43,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G9R Q84N F99S",3
"lib2","SARS-CoV-2","AATCCAAGGATGAGCT",9,55.54,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N4C S41C G86S",3
"lib2","SARS-CoV-2","AATCCAATACATGACC",1,7.85,7.83,-3,0.32,2.28,1.24,0.02,">1 nonsynonymous","C61I N64K A81I P149T",4
"lib2","SARS-CoV-2","AATCCAATATCAAACA",7,72.57,10.78,-0.06,0.05,2.93,1.08,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","AATCCAATCCAAAGCG",13,88.69,8.18,-2.65,0.22,1.5,1.01,0.02,">1 nonsynonymous","D68M E135A",2
"lib2","SARS-CoV-2","AATCCAATGAATCGCG",7,113.45,10.8,-0.04,0.04,3,1.02,0,"1 nonsynonymous","K199R",1
"lib2","SARS-CoV-2","AATCCAATGTCTGATT",17,109.68,10.46,-0.38,0.02,2.91,1.06,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","AATCCACAAACGTGAC",2,17.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R Y143F",2
"lib2","SARS-CoV-2","AATCCACAATTACCTC",1,5.1,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N4A A105D T201L",3
"lib2","SARS-CoV-2","AATCCACACTTTATGC",5,97.3,9.25,-1.59,0.05,2.92,1.09,0,"1 nonsynonymous","Y119I",1
"lib2","SARS-CoV-2","AATCCACAGTTAACAA",3,81.5,10.59,-0.24,0.05,2.91,1.07,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","AATCCACCAGACAAAA",2,31.33,8.28,-2.55,0.1,2.34,1.11,0,">1 nonsynonymous","N24E A105V G174V",3
"lib2","SARS-CoV-2","AATCCACCAGTATAAG",7,55.58,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A89R Y143C",2
"lib2","SARS-CoV-2","AATCCACCATCACAAT",18,62.43,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F62V I104E P149Q G155N",4
"lib2","SARS-CoV-2","AATCCACCCAACAAAA",3,27.51,10.72,-0.12,0.05,2.96,1.06,0,">1 nonsynonymous","T55G T100I",2
"lib2","SARS-CoV-2","AATCCACCCGCACACG",1,14.18,10.69,-0.15,0.05,3,1.03,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","AATCCACCGGCACAAA",2,56.28,10.85,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCCACCTGTGGCCT",12,123.19,10.67,-0.17,0.05,2.9,1.11,0,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","AATCCACGAAAGCCAC",3,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W Y21I Y91A N130L G174V",5
"lib2","SARS-CoV-2","AATCCACGCACATGGG",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V L57T T85A",3
"lib2","SARS-CoV-2","AATCCACGCGACTGAC",7,49.78,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","P82T P96E",2
"lib2","SARS-CoV-2","AATCCACGCTTCCGAA",9,104.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y119H C158L",2
"lib2","SARS-CoV-2","AATCCACTACCTTTCC",7,95.35,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E141Q F167P",2
"lib2","SARS-CoV-2","AATCCACTAGAGATTC",3,32.97,9.74,-1.09,0.1,2.33,1.05,0.01,">1 nonsynonymous","A14T A33K T100L",3
"lib2","SARS-CoV-2","AATCCACTCACAACAA",4,14.89,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","K87V C102V W106R E141Y",4
"lib2","SARS-CoV-2","AATCCACTCCGAATAA",2,14.35,10.48,-0.36,0.09,3,1.04,0,">1 nonsynonymous","L5A E10K I138D K199L",4
"lib2","SARS-CoV-2","AATCCACTTCATGTAT",1,15.92,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T3V A14S S43G S108D Y119L E141N G174S",7
"lib2","SARS-CoV-2","AATCCAGAGCATACAC",2,20.07,9.26,-1.58,0.23,1.65,1.14,0.03,">1 nonsynonymous","F8N A42W",2
"lib2","SARS-CoV-2","AATCCAGCATCGACAG",15,84.28,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","N1L S29F V71W G116S",4
"lib2","SARS-CoV-2","AATCCAGGACGGCACC",4,48.76,10,-0.84,0.07,2.82,1.03,0,">1 nonsynonymous","Y35S K48S",2
"lib2","SARS-CoV-2","AATCCAGGATGATAAA",8,123.82,10.47,-0.37,0.06,2.87,1.08,0,">1 nonsynonymous","L5M Q84L T100K T201F",4
"lib2","SARS-CoV-2","AATCCAGGCTATTGTG",7,78.12,10.79,-0.05,0.08,2.9,1.07,0,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","AATCCAGTATGAACAT",6,50.5,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y21T G83T V103I E135M V153L",5
"lib2","SARS-CoV-2","AATCCATAATTTGAGA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N K56C Y91D G174F",4
"lib2","SARS-CoV-2","AATCCATACAACTTAT",2,73.48,8.71,-2.13,0.05,2.98,1.06,0,">1 nonsynonymous","I104F I138E Y175N",3
"lib2","SARS-CoV-2","AATCCATACCAACCAT",3,0,NA,NA,NA,NA,NA,NA,"stop","A42I F62* Y178F",3
"lib2","SARS-CoV-2","AATCCATATAAATAAG",2,16.12,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","N13T I80K I88L G117V G155Y",5
"lib2","SARS-CoV-2","AATCCATATACCTCTA",1,20.18,7.12,-3.71,0.37,1.5,1.06,0.03,">1 nonsynonymous","N1S D137R V173M",3
"lib2","SARS-CoV-2","AATCCATATGGCCCTT",7,52.12,6,-4.84,0.8,1.5,1.14,0.01,">1 nonsynonymous","A14F S36F D98L G152N V173Q",5
"lib2","SARS-CoV-2","AATCCATGTCATCATT",3,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R G86V V180W",3
"lib2","SARS-CoV-2","AATCCATTCGAAAAGG",6,90.66,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y121G L131N",2
"lib2","SARS-CoV-2","AATCCATTGCATTTCG",3,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G C150L V182Y",3
"lib2","SARS-CoV-2","AATCCATTGGGCATTT",4,53.85,6,-4.84,1.95,3,1.2,0.01,">1 nonsynonymous","S19K I80V P177S",3
"lib2","SARS-CoV-2","AATCCATTTATGCCCA",5,41.79,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","I2V C61L V103R Y143E G174W",5
"lib2","SARS-CoV-2","AATCCCAAAAGCACAA",4,12.94,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9L S36E F99M A105F S129N",5
"lib2","SARS-CoV-2","AATCCCAAACGTCAGG",5,129.8,10.36,-0.47,0.04,2.97,1.04,0,">1 nonsynonymous","N1G G155N T201G",3
"lib2","SARS-CoV-2","AATCCCAAATAAAGTA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","D75L P82*",2
"lib2","SARS-CoV-2","AATCCCAACGTAGGCA",3,5.14,6.7,-4.14,2,1.5,1.22,0.05,">1 nonsynonymous","D90L R136E",2
"lib2","SARS-CoV-2","AATCCCAAGCTTTACA",6,35.47,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D75Y N107D S139W P149M S164L",5
"lib2","SARS-CoV-2","AATCCCAAGTGCTCTA",3,108.17,9.21,-1.62,0.05,2.92,1.12,0,"1 nonsynonymous","G117L",1
"lib2","SARS-CoV-2","AATCCCACAAGTTACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148D",1
"lib2","SARS-CoV-2","AATCCCACATTAACTA",7,107.09,10.17,-0.67,0.05,2.55,1.02,0,">1 nonsynonymous","E10V D98P K199R",3
"lib2","SARS-CoV-2","AATCCCACTTGTAATC",9,213.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37E V65G P177F",3
"lib2","SARS-CoV-2","AATCCCAGAAAATAAT",9,79.65,6,-4.84,1.58,1.5,1.21,0.02,">1 nonsynonymous","L5R E10I L38H F44C C61L T148N",6
"lib2","SARS-CoV-2","AATCCCAGAAACGCAA",2,77.2,8.91,-1.92,0.07,1.66,1.07,0,">1 nonsynonymous","F44C D59V Y66W T148A",4
"lib2","SARS-CoV-2","AATCCCAGTTATGACG",10,62.27,11.06,0.23,0.06,2.96,1.06,0,">1 nonsynonymous","E10S N171Y",2
"lib2","SARS-CoV-2","AATCCCATAAAAACGA",5,7.96,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F8L K87N G152I L183Q",4
"lib2","SARS-CoV-2","AATCCCATCCTGACCG",2,18.57,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S45Q V77K Y119L",3
"lib2","SARS-CoV-2","AATCCCCACAACTAAA",2,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58F F156T",2
"lib2","SARS-CoV-2","AATCCCCACAAGTCAC",1,26.45,8.56,-2.28,0.14,2.06,1.08,0.01,">1 nonsynonymous","N30T K48I R73A",3
"lib2","SARS-CoV-2","AATCCCCATAAATTGT",4,60.95,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y39V K48M T55P R136E V181N",5
"lib2","SARS-CoV-2","AATCCCCATTTTCCGT",1,16.24,8.37,-2.46,0.2,2.94,1,0.02,"1 nonsynonymous","F126S",1
"lib2","SARS-CoV-2","AATCCCCCGGCTTAGA",1,8.05,9.45,-1.39,0.42,2.19,1.21,0.03,"1 nonsynonymous","V71I",1
"lib2","SARS-CoV-2","AATCCCCTAAAATAAC",3,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S G166N V182E T201I",4
"lib2","SARS-CoV-2","AATCCCCTACACCGAA",7,179.56,10.73,-0.11,0.02,3,1.02,0,">1 nonsynonymous","S36E E135A",2
"lib2","SARS-CoV-2","AATCCCGAAAAACAGG",6,157.55,10.66,-0.17,0.05,2.82,1.11,0,">1 nonsynonymous","L5F A42I",2
"lib2","SARS-CoV-2","AATCCCGAGAACCAAC",2,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P N58L V65W A89G Y175L",5
"lib2","SARS-CoV-2","AATCCCGAGAATGTAC",6,16.35,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99P N107Q P133V F156T G174L R179I",6
"lib2","SARS-CoV-2","AATCCCGCCAGTATAA",5,55.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20M N107E Q168K T201H",4
"lib2","SARS-CoV-2","AATCCCGTAATTGTAC",1,22.25,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","S36I K114L L162F Q176P V180H",5
"lib2","SARS-CoV-2","AATCCCGTAGATTTAA",5,6.53,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib2","SARS-CoV-2","AATCCCTATACATCAA",6,5.61,NA,NA,NA,NA,NA,NA,"stop","D75E G86D V103* Q176K",4
"lib2","SARS-CoV-2","AATCCCTCATTGAGTG",7,68.24,10.29,-0.55,0.03,2.83,1.07,0,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","AATCCCTTAGCAATCG",11,99.82,7.04,-3.79,0.14,1.5,1.13,0,">1 nonsynonymous","A18S S129V Y165G",3
"lib2","SARS-CoV-2","AATCCCTTTATCAGAG",2,40.74,10.11,-0.72,0.07,2.84,1.04,0,">1 nonsynonymous","F99Y V153L",2
"lib2","SARS-CoV-2","AATCCGAAAATCATAT",5,61.89,10.81,-0.02,0.08,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCCGAACAGGGGTA",11,68.15,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","L95N",1
"lib2","SARS-CoV-2","AATCCGAACATACGAC",18,226.79,10.1,-0.74,0.07,2.55,1.01,0,">1 nonsynonymous","N13F S129Y",2
"lib2","SARS-CoV-2","AATCCGAACCGATTCA",4,55.65,10.74,-0.1,0.04,2.95,1.06,0,"1 nonsynonymous","F134M",1
"lib2","SARS-CoV-2","AATCCGAACGTATCTT",7,72.86,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G116N R136G N171R",3
"lib2","SARS-CoV-2","AATCCGAAGTAGGCAA",2,104.99,9.12,-1.72,0.09,2.58,1.05,0,">1 nonsynonymous","V37R F44G Y143M",3
"lib2","SARS-CoV-2","AATCCGAAGTCCTCGG",8,70.09,9.7,-1.13,0.08,1.88,1.12,0,">1 nonsynonymous","V37S F62V S69K",3
"lib2","SARS-CoV-2","AATCCGAATAAATGCT",4,98.31,8.12,-2.71,0.12,2.13,1.03,0.01,">1 nonsynonymous","F44N F62T N118E P149Q",4
"lib2","SARS-CoV-2","AATCCGACAGAATAAA",4,41.12,10.99,0.15,0.06,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AATCCGACCGTGGACA",7,1.86,NA,NA,NA,NA,NA,NA,"stop","N13L T55L L122* K128F",4
"lib2","SARS-CoV-2","AATCCGAGATGTATAT",9,192.05,10.26,-0.57,0.04,2.98,1.03,0,">1 nonsynonymous","S43K S113G",2
"lib2","SARS-CoV-2","AATCCGATAACTATCA",6,201.91,10.15,-0.69,0.06,2.61,1.01,0,">1 nonsynonymous","V37L V77C",2
"lib2","SARS-CoV-2","AATCCGATACACATGG",16,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M N58I G86K K94C S139V L162K Y175I",7
"lib2","SARS-CoV-2","AATCCGCAGCCTCACA",8,114.23,10.75,-0.09,0.02,2.95,1.05,0,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","AATCCGCCCATTGCTT",5,48.87,7.78,-3.05,0.24,1.5,1.16,0.02,">1 nonsynonymous","A14V F99L",2
"lib2","SARS-CoV-2","AATCCGCTAATCCCGC",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R S45G L60V C150L K198A",5
"lib2","SARS-CoV-2","AATCCGCTTGGTAGAA",8,47.38,8.98,-1.85,0.27,1.5,1.1,0.03,">1 nonsynonymous","V103M P149L",2
"lib2","SARS-CoV-2","AATCCGGAAACAGATC",4,28.48,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C49M R136P",2
"lib2","SARS-CoV-2","AATCCGGCAATCCTTG",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K W106F K132S T140S",4
"lib2","SARS-CoV-2","AATCCGGCGAGAACTG",7,123.64,10.46,-0.38,0.04,2.88,1.08,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","AATCCGGTACGACTCT",15,136.69,7.18,-3.65,0.25,1.5,1.21,0.01,">1 nonsynonymous","C6L F12P F126V P197T",4
"lib2","SARS-CoV-2","AATCCGTAGAGCACAG",4,21.13,6.19,-4.64,1.21,1.5,1.17,0.05,">1 nonsynonymous","E10I D98F W106C N118H",4
"lib2","SARS-CoV-2","AATCCGTCAATATCAC",8,85.13,8.45,-2.39,0.08,2.13,1.09,0,">1 nonsynonymous","A14S A33C K56F K114W Y119D",5
"lib2","SARS-CoV-2","AATCCGTCGTCGGTTT",4,4.24,NA,NA,NA,NA,NA,NA,"stop","S19V N92L Q168K Y175* V180E",5
"lib2","SARS-CoV-2","AATCCGTGAAACCCCA",2,31.83,9.54,-1.3,0.13,2.63,1.12,0.01,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","AATCCGTGCTATCTGT",18,192.54,9.78,-1.06,0.04,2.15,1.08,0,">1 nonsynonymous","S29T I88T T201V",3
"lib2","SARS-CoV-2","AATCCTAAATGAGTCT",2,0.65,NA,NA,NA,NA,NA,NA,"stop","F99C Q144* Q176L",3
"lib2","SARS-CoV-2","AATCCTAACCGATAAA",8,99.89,7.7,-3.14,0.15,1.55,1.14,0.01,">1 nonsynonymous","G86L H189S",2
"lib2","SARS-CoV-2","AATCCTACCCATCCTA",7,235.24,9.18,-1.65,0.04,2.84,1.1,0,">1 nonsynonymous","K128M G166C",2
"lib2","SARS-CoV-2","AATCCTACGTGTTCTA",7,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S R16H S36P C61Y V77T Y119L T201K",7
"lib2","SARS-CoV-2","AATCCTAGAGAATCTA",5,23.38,6,-4.84,1.15,1.5,1.09,0.02,">1 nonsynonymous","Y21Q V37L P82T",3
"lib2","SARS-CoV-2","AATCCTATAATAGAAC",8,1.42,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","AATCCTATATTGGCAT",4,111,9.65,-1.18,0.05,2.87,1.04,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","AATCCTATCAACAAAA",3,36.92,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","N4Q G9N C49D F70E L95E",5
"lib2","SARS-CoV-2","AATCCTATCCTTTCGA",9,54.15,10.71,-0.13,0.05,2.91,1.1,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","AATCCTATTACAGAGG",4,57.4,10.83,0,0.03,2.97,1.02,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","AATCCTCACAGAGAGT",13,86.6,10.48,-0.35,0.04,2.9,1.1,0,">1 nonsynonymous","A42T N151F",2
"lib2","SARS-CoV-2","AATCCTCATCCAATCT",4,21.89,9.43,-1.4,0.07,2.07,1,0,">1 nonsynonymous","T3L S45I D97S",3
"lib2","SARS-CoV-2","AATCCTCATGCGACAC",15,90.6,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C6L V65R G86A Y165E V173T",5
"lib2","SARS-CoV-2","AATCCTCTTCGTAGTA",10,119.43,10.73,-0.11,0.04,2.88,1.1,0,">1 nonsynonymous","L5S S36I",2
"lib2","SARS-CoV-2","AATCCTGAGGAGATGA",3,34.04,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y121S G146K T201S",3
"lib2","SARS-CoV-2","AATCCTGATCCCCCAT",2,102.19,10.19,-0.64,0.04,2.95,1.05,0,"1 nonsynonymous","P169Q",1
"lib2","SARS-CoV-2","AATCCTGATTTTGACA",2,28.84,8.18,-2.65,0.14,2.44,1.07,0.01,">1 nonsynonymous","S19D G166W G196A",3
"lib2","SARS-CoV-2","AATCCTGTATTAACGA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","AATCCTGTCGACACCG",9,100.04,9.32,-1.52,0.06,2.88,1.11,0,"1 nonsynonymous","L125Y",1
"lib2","SARS-CoV-2","AATCCTTAACTTCTAA",5,42.14,10.08,-0.76,0.15,2.16,1.21,0.01,">1 nonsynonymous","G9N V181A",2
"lib2","SARS-CoV-2","AATCCTTAAGACGCTT",10,557.35,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14S F62K Q176L",3
"lib2","SARS-CoV-2","AATCCTTAAGTGAAGT",3,3.42,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATCCTTCCCGTCAAG",13,26.05,6.89,-3.94,0.54,1.5,1.09,0.06,">1 nonsynonymous","A42S S69E F156Y V181A",4
"lib2","SARS-CoV-2","AATCCTTCCTATAGTA",3,58.53,10.72,-0.12,0.04,2.94,1.06,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","AATCCTTCTAAAAAAT",5,15.64,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N13V D59R K114T L131K F160R S200W",6
"lib2","SARS-CoV-2","AATCCTTGCGCCTCCT",2,14.89,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","C61P A105K Y165M",3
"lib2","SARS-CoV-2","AATCCTTGCTGCAGGC",2,65.93,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S36D K56I I80K N120R",4
"lib2","SARS-CoV-2","AATCCTTTAACCTAGT",13,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N D112Y Y175W",3
"lib2","SARS-CoV-2","AATCCTTTTTTAAGTC",3,15.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G83I G116Y K128M",3
"lib2","SARS-CoV-2","AATCGAAATTCCCGCA",3,15.82,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","C49I N107I",2
"lib2","SARS-CoV-2","AATCGAACAAAAAATT",3,50.74,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L38F P54C K94Q L162A",4
"lib2","SARS-CoV-2","AATCGAACGATTTATT",12,130.58,6,-4.84,1.59,1.5,1.17,0.01,">1 nonsynonymous","S36I S41F K56I Y165T",4
"lib2","SARS-CoV-2","AATCGAACTGTAACTT",4,26.9,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","Y21C K56L V103G P169T",4
"lib2","SARS-CoV-2","AATCGAAGACCATAAT",2,9.28,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7V Y143R",2
"lib2","SARS-CoV-2","AATCGAATCTCGGGTG",7,159.46,8.71,-2.13,0.07,2.9,1.09,0,">1 nonsynonymous","G74E P169S",2
"lib2","SARS-CoV-2","AATCGAATTTGAGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","D68N D90L F134*",3
"lib2","SARS-CoV-2","AATCGACACCTAGCAA",6,120.5,8.93,-1.91,0.08,2.92,1.12,0,"1 nonsynonymous","L125R",1
"lib2","SARS-CoV-2","AATCGACATCTTTAAA",2,66.74,10.12,-0.72,0.08,2.6,1.04,0,">1 nonsynonymous","T148Y L162V A190C",3
"lib2","SARS-CoV-2","AATCGACCCAACCACT",6,72.26,10.38,-0.46,0.05,2.81,1.09,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","AATCGACCTACCAACT",6,66.49,8.75,-2.08,0.09,2.97,1.11,0,">1 nonsynonymous","L122K I142K F156E",3
"lib2","SARS-CoV-2","AATCGACGAAATTGTA",10,98.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35R A81Y G146M N157M",4
"lib2","SARS-CoV-2","AATCGACTATGACATA",3,11.89,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I72D I142W",2
"lib2","SARS-CoV-2","AATCGACTCCCCAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* C61R",2
"lib2","SARS-CoV-2","AATCGACTGATGGACC",6,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","AATCGACTTACAGTAA",2,53.57,10.81,-0.03,0.06,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCGACTTTTAAGGA",4,0,NA,NA,NA,NA,NA,NA,"stop","S113Q Y121* K199I",3
"lib2","SARS-CoV-2","AATCGAGAATCATAAG",6,72.35,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F62R F70L G117L V173D F185I",5
"lib2","SARS-CoV-2","AATCGAGACTGATTGT",2,1.55,NA,NA,NA,NA,NA,NA,"stop","T3A Y39R G86F Y91F I104Y S147V C150S F160*",8
"lib2","SARS-CoV-2","AATCGAGAGGACCCAG",2,17.35,10.79,-0.05,0.05,2.99,1.04,0,">1 nonsynonymous","I138K S200A",2
"lib2","SARS-CoV-2","AATCGAGCATAATCCC",6,93.77,10.71,-0.12,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCGAGGAGACCCCT",4,3.66,NA,NA,NA,NA,NA,NA,"stop","A33* N64L I88S A89T R127W G146S T201L",7
"lib2","SARS-CoV-2","AATCGAGGATACTTAG",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V N24H N107G N120I",4
"lib2","SARS-CoV-2","AATCGAGGCGGTCCCT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","P7* R27E N58S R136W Q163A",5
"lib2","SARS-CoV-2","AATCGAGTAATTATCC",6,146.72,9.68,-1.15,0.03,2.9,1.06,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","AATCGATAATACTAGG",2,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57E D68N G83I K87W G117K N151C",6
"lib2","SARS-CoV-2","AATCGATACCTGACAA",2,33.58,10.89,0.05,0.05,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCGATACCTTCAAG",2,33.98,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N1K G51A G83S W106M P197E",5
"lib2","SARS-CoV-2","AATCGATAGGTATAAC",2,16.52,7.43,-3.41,0.24,1.85,1.03,0.02,">1 nonsynonymous","S43L N64V G86T",3
"lib2","SARS-CoV-2","AATCGATGATTTATCA",1,27.35,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","N120I C158R Q168D",3
"lib2","SARS-CoV-2","AATCGATGGCCACAGG",1,39.54,9.54,-1.3,0.08,1.84,1.06,0,">1 nonsynonymous","L95T K132M A192T",3
"lib2","SARS-CoV-2","AATCGATTACTTTCTA",1,30.61,10.73,-0.11,0.04,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCGATTCTGAATCC",3,20.79,10.79,-0.05,0.07,3,1.03,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","AATCGCAAAAATCCAC",8,29.24,6,-4.84,2,3,1.23,0,">1 nonsynonymous","C6W S41G T63R D97N D112F",5
"lib2","SARS-CoV-2","AATCGCAACTCACTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","F47Y F99Q Y165G Q168*",4
"lib2","SARS-CoV-2","AATCGCAATAATTTTC",14,44.6,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y66G D90P Q144R C158T",4
"lib2","SARS-CoV-2","AATCGCACATTAATAA",10,87.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50T Y66F S139C V173H T201S",5
"lib2","SARS-CoV-2","AATCGCACTATAGACG",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F L60Y I104T C158N",4
"lib2","SARS-CoV-2","AATCGCAGATACAATA",1,11.16,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A14D T63C I88Y W106H D137C",5
"lib2","SARS-CoV-2","AATCGCATCACTCAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","F99L W106* Y119P N157I",4
"lib2","SARS-CoV-2","AATCGCATTAGGTGCG",3,31.57,10.55,-0.29,0.06,2.98,1.01,0,">1 nonsynonymous","N1I G152S",2
"lib2","SARS-CoV-2","AATCGCCAAAATTATA",5,84.43,10.23,-0.6,0.05,2.83,1.07,0,">1 nonsynonymous","G51R N64I E141V",3
"lib2","SARS-CoV-2","AATCGCCATAGATCTA",7,29.49,8.86,-1.98,0.24,1.5,1,0.03,">1 nonsynonymous","P82S Y91L K199M",3
"lib2","SARS-CoV-2","AATCGCCATTTCTTAC",9,91.85,9.77,-1.07,0.07,1.95,1.04,0,">1 nonsynonymous","L38Y D90G L122F L187M",4
"lib2","SARS-CoV-2","AATCGCCCATATACCG",10,68.08,9.42,-1.41,0.07,1.75,1.09,0,">1 nonsynonymous","T55R S69T K94A W106F",4
"lib2","SARS-CoV-2","AATCGCGACATCATGG",2,10.71,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","N64Q I104R K128I G152C",4
"lib2","SARS-CoV-2","AATCGCGAGCAAAGAA",2,6.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60T F134M",2
"lib2","SARS-CoV-2","AATCGCGATTTAAATA",1,60.27,10.27,-0.56,0.05,2.8,1.01,0,">1 nonsynonymous","S45C N110R T148E",3
"lib2","SARS-CoV-2","AATCGCGGAGACGAAA",2,22.01,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","K128V Q176I V181D",3
"lib2","SARS-CoV-2","AATCGCTACACACATT",7,65.85,10.93,0.09,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCGCTATATCTGGA",7,253.15,10.1,-0.73,0.05,2.6,1.04,0,">1 nonsynonymous","R136T V173R A190H",3
"lib2","SARS-CoV-2","AATCGGAAAGGCATTA",14,298.67,10.82,-0.02,0.03,2.96,1.06,0,">1 nonsynonymous","R16T V173F K198T",3
"lib2","SARS-CoV-2","AATCGGAAATGTCCAT",1,16.13,10.5,-0.33,0.1,2.68,1.3,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","AATCGGAAGCAGGGGG",5,147,10.57,-0.26,0.03,2.95,1.03,0,"1 nonsynonymous","F47Y",1
"lib2","SARS-CoV-2","AATCGGACACTGTCCT",2,15.89,10.67,-0.17,0.1,2.9,1.13,0.01,"1 nonsynonymous","S45H",1
"lib2","SARS-CoV-2","AATCGGACTGATACAT",3,9.76,8.58,-2.26,0.43,2.29,1,0.07,">1 nonsynonymous","L5D S41N Y123T E135V P149T",5
"lib2","SARS-CoV-2","AATCGGAGCATATCCA",2,37.99,9.64,-1.19,0.09,2.1,1,0,">1 nonsynonymous","F8S S139G",2
"lib2","SARS-CoV-2","AATCGGCAACACCATA",3,8.74,6,-4.84,2,3,1.29,0.02,">1 nonsynonymous","G9V V103S Y121T F185L",4
"lib2","SARS-CoV-2","AATCGGCCAGGGGTAG",1,17.22,9.92,-0.92,0.11,2.93,1.02,0.01,">1 nonsynonymous","L5D A67L P96S F156I",4
"lib2","SARS-CoV-2","AATCGGCCGACCTGTT",7,1.27,NA,NA,NA,NA,NA,NA,"stop","W23* F44A Y50P P82T K94L",5
"lib2","SARS-CoV-2","AATCGGCTAACCGATA",4,0.7,NA,NA,NA,NA,NA,NA,"stop","F47D V77*",2
"lib2","SARS-CoV-2","AATCGGCTCAAAGCCT",1,6.91,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G116R K128H Y159R E186I C195Y",5
"lib2","SARS-CoV-2","AATCGGGGTATACGCT",3,49.42,9.74,-1.09,0.06,2.27,1.01,0,">1 nonsynonymous","A42G V65F A67S S200L",4
"lib2","SARS-CoV-2","AATCGGGGTATTACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","F44P P133* T170*",3
"lib2","SARS-CoV-2","AATCGGTAGCAACCTA",7,175.74,10.78,-0.06,0.03,2.92,1.09,0,">1 nonsynonymous","T3N T148A A192S",3
"lib2","SARS-CoV-2","AATCGGTTCAACCAAC",6,62.83,9.32,-1.52,0.06,2.93,1.12,0,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","AATCGTAAAATCCTAA",4,2.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","AATCGTAAACTTCAGG",10,105.49,7.88,-2.95,0.17,1.5,1.13,0.01,">1 nonsynonymous","P133R Y143L",2
"lib2","SARS-CoV-2","AATCGTAAATGCTTGA",4,60.12,10.37,-0.47,0.04,2.94,1.03,0,">1 nonsynonymous","N64R N120L N151E",3
"lib2","SARS-CoV-2","AATCGTAACGCTTCTT",7,58.49,6,-4.84,1.77,1.5,1.18,0.01,">1 nonsynonymous","A89L L95C",2
"lib2","SARS-CoV-2","AATCGTAACTTATGTA",8,56.79,8.75,-2.08,0.15,1.5,1.08,0.01,">1 nonsynonymous","I2K Y35E C102V",3
"lib2","SARS-CoV-2","AATCGTAAGCACATAA",3,86.08,8.25,-2.58,0.11,2.75,1.04,0,">1 nonsynonymous","Y143I P149L G155T",3
"lib2","SARS-CoV-2","AATCGTACAAAACTCA",3,9.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100W R179I K198S",3
"lib2","SARS-CoV-2","AATCGTACAAACTAAA",3,18.76,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F8A K48I D97A D112G N120Q N171K",6
"lib2","SARS-CoV-2","AATCGTACAAATAAAA",7,16.81,6.52,-4.31,0.77,1.5,1.21,0.03,">1 nonsynonymous","K56M P96I N151L",3
"lib2","SARS-CoV-2","AATCGTAGATAGTACC",9,212.17,6,-4.84,1.86,1.5,1.24,0.02,">1 nonsynonymous","P82R N92W Y119T I138H",4
"lib2","SARS-CoV-2","AATCGTAGCTATAGAA",13,201.22,10.64,-0.19,0.03,2.96,1.02,0,"1 nonsynonymous","A81R",1
"lib2","SARS-CoV-2","AATCGTAGGACGTCAT",3,115.83,10.69,-0.14,0.04,2.92,1.11,0,">1 nonsynonymous","I2V S41R",2
"lib2","SARS-CoV-2","AATCGTATCAAAGGAT",2,11.37,6,-4.84,2,3,1.05,0,">1 nonsynonymous","T85M W106P L122P S147Y",4
"lib2","SARS-CoV-2","AATCGTCACTTTTCTC",1,12,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","S41A C61V E76N G86V",4
"lib2","SARS-CoV-2","AATCGTCAGAGGTGCA",13,270.29,10.29,-0.54,0.03,2.95,1.03,0,"1 nonsynonymous","G152V",1
"lib2","SARS-CoV-2","AATCGTCATTTCTAGA",2,24.82,10.44,-0.4,0.06,2.88,1.05,0,">1 nonsynonymous","F47C I138M",2
"lib2","SARS-CoV-2","AATCGTCCATCCAGTC",4,96.6,10.58,-0.26,0.04,2.85,1.05,0,">1 nonsynonymous","N4A Y178T",2
"lib2","SARS-CoV-2","AATCGTCGCGAATAAA",7,122.03,9.96,-0.88,0.04,2.57,1.02,0,">1 nonsynonymous","A22V L95V",2
"lib2","SARS-CoV-2","AATCGTCTTTTACGGT",4,60.26,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3K K48I N64E Y93M K128P N157I V182K",7
"lib2","SARS-CoV-2","AATCGTGCTACGATAT",8,65.35,8.11,-2.72,0.21,1.5,1.08,0.01,"1 nonsynonymous","I88F",1
"lib2","SARS-CoV-2","AATCGTTCCATATATT",7,104,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G9Y G101L",2
"lib2","SARS-CoV-2","AATCGTTGAAATGTAT",9,78.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59Y R124D S139R G152H",4
"lib2","SARS-CoV-2","AATCGTTTTACTACAC",1,14.2,9.33,-1.5,0.14,2.24,1.13,0.01,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","AATCTAAAAACAAACT",9,100.03,10.8,-0.04,0.04,2.94,1.07,0,">1 nonsynonymous","S43K Q144K",2
"lib2","SARS-CoV-2","AATCTAAAAGAAATGA",1,62.57,10.83,0,0.05,2.94,1.07,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","AATCTAAAAGGCAGAA",3,54.5,7.34,-3.49,0.32,1.5,1.1,0.02,">1 nonsynonymous","G86S L122S S184E",3
"lib2","SARS-CoV-2","AATCTAAAGAACCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49* D112L",2
"lib2","SARS-CoV-2","AATCTAACACCGCGAT",2,7.5,9.67,-1.17,0.18,2.76,1.07,0.02,">1 nonsynonymous","P7F C61N G152T",3
"lib2","SARS-CoV-2","AATCTAAGATCTGGAT",2,59.47,10.82,-0.01,0.06,3,1.03,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","AATCTAAGCCAGGGTT",8,9.39,NA,NA,NA,NA,NA,NA,"stop","I72L P82S S139*",3
"lib2","SARS-CoV-2","AATCTAAGGAATTGAT",8,55.75,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F12D R127V K132P N151C L187P",5
"lib2","SARS-CoV-2","AATCTAAGTGCGCAAT",10,22.79,10.72,-0.11,0.05,2.82,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTAATCGCTAAAT",12,77.35,9.14,-1.69,0.11,1.77,1.09,0.01,">1 nonsynonymous","D90H N107R",2
"lib2","SARS-CoV-2","AATCTAATGCGCAACA",1,9,10.49,-0.35,0.13,2.76,1.24,0.01,">1 nonsynonymous","F17W K56R V115H H189Y",4
"lib2","SARS-CoV-2","AATCTAATGGTAGGCA",3,122.17,7.73,-3.11,0.08,1.65,1.11,0,">1 nonsynonymous","Y121E P133F",2
"lib2","SARS-CoV-2","AATCTAATTAAAACAA",1,11.1,11.14,0.3,0.07,2.98,1.02,0,">1 nonsynonymous","T3P T85S V173R",3
"lib2","SARS-CoV-2","AATCTACAAAAGTATA",9,68.64,8.11,-2.73,0.16,1.97,1.11,0.01,">1 nonsynonymous","V32I Y121L Y159M T170S",4
"lib2","SARS-CoV-2","AATCTACAAGAAGTTG",4,44.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L G51V R124E",3
"lib2","SARS-CoV-2","AATCTACAAGTTACTA",3,64.98,9.22,-1.62,0.08,1.73,1.08,0,">1 nonsynonymous","Y91R K114R P133Y H189N",4
"lib2","SARS-CoV-2","AATCTACAATGCAATC",3,21.19,9.14,-1.69,0.12,2.92,1.07,0,">1 nonsynonymous","I2C G117F",2
"lib2","SARS-CoV-2","AATCTACACGTCTTTA",2,10.24,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L60S L131S L162K T201V",4
"lib2","SARS-CoV-2","AATCTACATCGACGGA",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21V D97A Y165T",3
"lib2","SARS-CoV-2","AATCTACATCTACTAG",2,22.47,10.72,-0.12,0.11,2.83,1.15,0,">1 nonsynonymous","E141T A192M",2
"lib2","SARS-CoV-2","AATCTACATGATATCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","AATCTACCAAGACCAT",3,47.56,8.34,-2.5,0.12,2.2,1.06,0.01,"1 nonsynonymous","Y165A",1
"lib2","SARS-CoV-2","AATCTACCAAGCAATG",8,171.28,8.27,-2.56,0.12,2.15,1.07,0.01,">1 nonsynonymous","T148S G155F G174F",3
"lib2","SARS-CoV-2","AATCTACCTAATGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* F160D",2
"lib2","SARS-CoV-2","AATCTACGAGGTGGGT",7,113.37,9.95,-0.88,0.04,2.86,1.08,0,">1 nonsynonymous","G83L N118A",2
"lib2","SARS-CoV-2","AATCTACTCGAGACAC",4,34.75,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","G83N G86A Y121V",3
"lib2","SARS-CoV-2","AATCTACTTGAAAGAC",11,327.79,10.25,-0.59,0.04,2.77,1.03,0,">1 nonsynonymous","R16V F99Y",2
"lib2","SARS-CoV-2","AATCTAGACAGTAAAT",1,59.44,10.86,0.02,0.08,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AATCTAGACCCAAGCA",15,135.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G51P N64Y F70Y F156D G166A",5
"lib2","SARS-CoV-2","AATCTAGACTCTAGGA",3,16.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S29M C49S P54N A81F T100S",5
"lib2","SARS-CoV-2","AATCTAGAGCCGTCCT",7,171.24,10.85,0.01,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AATCTAGAGTTGAAAT",4,28.3,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","F99C G117Q G152N",3
"lib2","SARS-CoV-2","AATCTAGATCTTACAA",6,67.5,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","D34H V37L C150M E154P",4
"lib2","SARS-CoV-2","AATCTAGATTCAATGA",4,19.99,6,-4.84,2,3,1.07,0,">1 nonsynonymous","R27Q D59G P96S Y123L P161I",5
"lib2","SARS-CoV-2","AATCTAGCATGGTCTG",5,253.76,9.45,-1.39,0.05,2.77,1.08,0,">1 nonsynonymous","S53F P177A S184T",3
"lib2","SARS-CoV-2","AATCTAGCCACTAACA",5,34.16,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","D68N R73T A105L T170F",4
"lib2","SARS-CoV-2","AATCTAGTCACAGTCA",12,179.09,10.05,-0.78,0.1,2.47,1.01,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","AATCTATAAAATCGAG",8,135.28,10.51,-0.33,0.04,2.99,1.03,0,">1 nonsynonymous","F8L D97C T201S",3
"lib2","SARS-CoV-2","AATCTATAAATTCCCG",2,14.33,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","R16I V115F Y123I P177L",4
"lib2","SARS-CoV-2","AATCTATAAGTAGGAA",6,73.44,6,-4.84,1.4,1.5,1.14,0.01,">1 nonsynonymous","Y35T S53F N107R Y178T",4
"lib2","SARS-CoV-2","AATCTATAGCAAACGC",2,28.3,10.87,0.03,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTATATGACCAAA",6,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P G86K D98F S113L",4
"lib2","SARS-CoV-2","AATCTATCATGAACGA",8,95.61,10.74,-0.1,0.05,2.93,1.08,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","AATCTATCCATCCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","AATCTATCTGCGCTAT",18,253.99,9.69,-1.14,0.05,2.02,1.07,0,">1 nonsynonymous","T3P V11E T55S",3
"lib2","SARS-CoV-2","AATCTATGGGAATTCA",1,11.68,11.13,0.3,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTATTAAATCGGT",8,43.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37N S43N P82V K94L",4
"lib2","SARS-CoV-2","AATCTATTACAACTTT",5,44.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R124K C150F",2
"lib2","SARS-CoV-2","AATCTCAAACATTGCG",1,54.94,10.47,-0.36,0.03,2.94,1.05,0,"1 nonsynonymous","I104C",1
"lib2","SARS-CoV-2","AATCTCAAAGCACTGA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","L5* K128T",2
"lib2","SARS-CoV-2","AATCTCAAATGTAACA",2,107.9,8.78,-2.06,0.06,2.02,1.08,0,">1 nonsynonymous","P149Q Q176R",2
"lib2","SARS-CoV-2","AATCTCAAGCGCTATG",14,3.63,NA,NA,NA,NA,NA,NA,"stop","W23L F99* N107A Y165T",4
"lib2","SARS-CoV-2","AATCTCAAGCTACAGA",2,14.75,9.19,-1.65,0.15,1.98,1.17,0.01,">1 nonsynonymous","D112V T148S",2
"lib2","SARS-CoV-2","AATCTCACCTGCCCAC",3,21.88,8.86,-1.98,0.17,1.84,1.1,0.01,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","AATCTCACGATAAAAG",15,241,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Q144W G172M",2
"lib2","SARS-CoV-2","AATCTCACGGCCCCAA",4,88.11,9.15,-1.69,0.1,1.86,1.06,0,">1 nonsynonymous","W23Q P54R I138L V173L",4
"lib2","SARS-CoV-2","AATCTCACGTTTAAGA",7,25.73,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","N13W V103F Y143T N157T",4
"lib2","SARS-CoV-2","AATCTCACTAAATTCA",8,79.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64L P82L P177F",3
"lib2","SARS-CoV-2","AATCTCAGCCTGAATC",4,31.72,10.16,-0.68,0.08,2.94,1.05,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","AATCTCAGTCGCCGGT",2,10.68,9.36,-1.48,0.09,2.92,1.08,0,">1 nonsynonymous","L60T N171L",2
"lib2","SARS-CoV-2","AATCTCATAGCACCAG",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P S19W D90R V115R",4
"lib2","SARS-CoV-2","AATCTCATCATATAAG",6,140.87,10.46,-0.38,0.05,2.84,1.05,0,">1 nonsynonymous","L57I G83N D97N",3
"lib2","SARS-CoV-2","AATCTCATGTATAAAG",1,8.97,6.11,-4.73,0.36,3,1.09,0,">1 nonsynonymous","T85K D98P A105Q",3
"lib2","SARS-CoV-2","AATCTCCACCGTATTT",9,6.89,NA,NA,NA,NA,NA,NA,"stop","N64* Y119A",2
"lib2","SARS-CoV-2","AATCTCCACTTACCCA",8,102.62,10.21,-0.62,0.03,2.98,1.04,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","AATCTCCAGTAAAGTG",1,0.97,NA,NA,NA,NA,NA,NA,"stop","T15* T55M T170V",3
"lib2","SARS-CoV-2","AATCTCCCCGTCCCTA",4,12.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F44A Y121D E141T",3
"lib2","SARS-CoV-2","AATCTCCCTTTTCAAC",5,88.84,9.05,-1.79,0.09,1.74,1.06,0,">1 nonsynonymous","F12R R78C",2
"lib2","SARS-CoV-2","AATCTCCGGCATCTTA",6,0.07,NA,NA,NA,NA,NA,NA,"stop","L95S K114*",2
"lib2","SARS-CoV-2","AATCTCCTATTCGCAG",8,106.87,10.81,-0.03,0.05,2.94,1.06,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","AATCTCGAACCAGATG",2,7.94,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","W106D Y121I",2
"lib2","SARS-CoV-2","AATCTCGACTGTGTCG",5,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L V103Q G146Y",3
"lib2","SARS-CoV-2","AATCTCGATGTAGAAA",2,21.24,10.72,-0.12,0.07,2.88,1.13,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","AATCTCTAAGCAGGAT",1,10.8,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T3P A14R C31Y V115R P161T",5
"lib2","SARS-CoV-2","AATCTCTAATAGATAT",1,31.87,6.69,-4.15,0.59,1.5,1.18,0.04,">1 nonsynonymous","N30C S53V Y165I",3
"lib2","SARS-CoV-2","AATCTCTAGAACCAGA",5,126.06,10.82,-0.02,0.04,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTCTCATGCTGGT",8,98.96,9.67,-1.16,0.08,2.69,1.06,0,">1 nonsynonymous","D90L G146D",2
"lib2","SARS-CoV-2","AATCTCTCCGGTGTTA",4,48.5,9.67,-1.16,0.08,2.3,1.05,0,">1 nonsynonymous","D34T P54Q G152T",3
"lib2","SARS-CoV-2","AATCTCTCCTTCTTGA",6,82.13,8.18,-2.65,0.12,2.43,1.07,0.01,">1 nonsynonymous","C61W G166V Q176M",3
"lib2","SARS-CoV-2","AATCTCTCGGCCATTG",1,22.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E R25S A89N P96H P133R L187Y",6
"lib2","SARS-CoV-2","AATCTCTCGTAGGTGG",9,58.12,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2C G9I T55S D97Q G101I Y165G",6
"lib2","SARS-CoV-2","AATCTCTCGTCTACGT",3,0.86,NA,NA,NA,NA,NA,NA,"stop","D59W W106N S164N K198*",4
"lib2","SARS-CoV-2","AATCTCTCTATGCAAG",1,23.14,10.56,-0.28,0.08,2.92,1.08,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","AATCTCTGACCGACTA",21,69.14,6,-4.84,1.48,1.5,1.21,0.02,"1 nonsynonymous","L183Q",1
"lib2","SARS-CoV-2","AATCTCTGTCAAGCTG",2,14.54,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F17I Y66R Y123N V173S",4
"lib2","SARS-CoV-2","AATCTCTGTGTTGACT",10,28.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15I F99S T140S F167L",4
"lib2","SARS-CoV-2","AATCTCTTAACACATC",5,214.85,10.59,-0.25,0.03,2.97,1.01,0,">1 nonsynonymous","K26L G146A",2
"lib2","SARS-CoV-2","AATCTCTTCCTCGATT",9,85.82,10.86,0.02,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTGAAAAGCTGAT",6,50.29,10.38,-0.45,0.05,2.78,1.07,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","AATCTGAACCTACTCT",6,63.17,10.42,-0.42,0.05,2.92,1.05,0,">1 nonsynonymous","K26T Y39L S45M S139D",4
"lib2","SARS-CoV-2","AATCTGAAGCGACCCA",4,101.72,10.52,-0.32,0.04,2.93,1.05,0,">1 nonsynonymous","T55S D98T N120V",3
"lib2","SARS-CoV-2","AATCTGAAGTAATACA",6,117.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12S R124V Y143C G172N",4
"lib2","SARS-CoV-2","AATCTGATAAAAACGC",5,84.32,9.37,-1.47,0.05,2.78,1.11,0,">1 nonsynonymous","N120R G146Q",2
"lib2","SARS-CoV-2","AATCTGATAAGAAAAG",4,67.34,6,-4.84,1.87,1.5,1.27,0.02,">1 nonsynonymous","F8T K26E S113L G146C",4
"lib2","SARS-CoV-2","AATCTGATAGAAAAGT",7,3.94,NA,NA,NA,NA,NA,NA,"stop","T15N Y21* D90F N107G Y119E",5
"lib2","SARS-CoV-2","AATCTGATCTTTCAGC",4,69.13,10.62,-0.21,0.02,2.96,1.05,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","AATCTGATGATGCGAC",16,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R G117S E154G G174N",4
"lib2","SARS-CoV-2","AATCTGCCATCCCGTA",4,214.12,8.91,-1.92,0.05,2.79,1.05,0,">1 nonsynonymous","N4C G174V",2
"lib2","SARS-CoV-2","AATCTGCGAGAACATG",1,8.22,NA,NA,NA,NA,NA,NA,"stop","F70G E76* T140* E154L",4
"lib2","SARS-CoV-2","AATCTGCGTAAACATA",1,5.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M A81I T100Y L162W",4
"lib2","SARS-CoV-2","AATCTGCTACGTTGAT",6,107.43,10.78,-0.06,0.06,2.83,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AATCTGGAAACTCGTC",10,3010.58,10.79,-0.04,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTGGAACAAAACT",4,0,NA,NA,NA,NA,NA,NA,"stop","L60M K114S E141Q T148N T201*",5
"lib2","SARS-CoV-2","AATCTGGATTGCCCCT",1,12.56,9.5,-1.34,0.19,2.03,1.03,0.01,">1 nonsynonymous","K56M V77T D90S T148V",4
"lib2","SARS-CoV-2","AATCTGGCTGAGAACT",7,59.38,9.82,-1.01,0.09,2.35,1.03,0,"1 nonsynonymous","Y123G",1
"lib2","SARS-CoV-2","AATCTGGGTACCCACA",1,46.65,8.34,-2.49,0.11,2.82,1.06,0,">1 nonsynonymous","R16I E135S Q168K",3
"lib2","SARS-CoV-2","AATCTGGTCTGCTTAG",3,49.33,10.79,-0.05,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTGTAACATGTTG",5,73.89,9.4,-1.44,0.06,2.92,1.04,0,">1 nonsynonymous","F12L F156N",2
"lib2","SARS-CoV-2","AATCTGTAGATATTCA",4,88.09,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A33L Y91N P177G",3
"lib2","SARS-CoV-2","AATCTGTCCACAATGT",4,12.67,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I2Q C49V Y66D G86V S147L G172V T201R",7
"lib2","SARS-CoV-2","AATCTGTCCAGCCATT",3,59.34,10.61,-0.22,0.05,2.87,1.11,0,">1 nonsynonymous","N30K S41Y",2
"lib2","SARS-CoV-2","AATCTGTGAAAAGCAA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F12* A145F F167P",3
"lib2","SARS-CoV-2","AATCTGTGACGCGAAA",8,1.5,NA,NA,NA,NA,NA,NA,"stop","L5* C49G G101R V153N",4
"lib2","SARS-CoV-2","AATCTGTGATCCCACA",12,43.39,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A42K D68W Y165I",3
"lib2","SARS-CoV-2","AATCTTAAACAACATG",6,143.89,8.16,-2.67,0.09,1.95,1.1,0,">1 nonsynonymous","N107H V115W",2
"lib2","SARS-CoV-2","AATCTTAAACTAAATT",2,20.84,10.59,-0.24,0.17,2.5,1.09,0.01,">1 nonsynonymous","N58D Y66D",2
"lib2","SARS-CoV-2","AATCTTAAATACGCGC",5,23.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V32G A89R G101R",3
"lib2","SARS-CoV-2","AATCTTAAATGGGCAA",5,13.81,6,-4.84,2,3,1.23,0,">1 nonsynonymous","N13Y K26P Y50C R127L",4
"lib2","SARS-CoV-2","AATCTTAAATTTAAAT",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152S Q163M",2
"lib2","SARS-CoV-2","AATCTTAACCATCTAT",4,26.98,7.76,-3.07,0.13,1.61,1.04,0.01,">1 nonsynonymous","K114V Y121D",2
"lib2","SARS-CoV-2","AATCTTAAGGGTCAAT",2,29.12,9.74,-1.1,0.08,2.52,1.03,0,">1 nonsynonymous","Y121K N151L",2
"lib2","SARS-CoV-2","AATCTTAATGCTAAAT",2,55.87,9.02,-1.82,0.2,1.5,1.05,0.02,">1 nonsynonymous","Y35W L95P G196A",3
"lib2","SARS-CoV-2","AATCTTAATTGGACAA",1,115.9,10.75,-0.08,0.02,2.95,1.06,0,"1 nonsynonymous","Q163R",1
"lib2","SARS-CoV-2","AATCTTACAAGTATTG",14,76.73,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G51Y R73P R127A F134I I142Y Q168L V181E",7
"lib2","SARS-CoV-2","AATCTTACGCGGCGAG",3,12.27,6.59,-4.25,0.75,1.5,1.23,0.07,">1 nonsynonymous","D34N N107R Q176T",3
"lib2","SARS-CoV-2","AATCTTACTCTTTTAC",5,65.8,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A67V D97V W106R L111D F167D T201N",6
"lib2","SARS-CoV-2","AATCTTACTGTCTCCT",6,164.64,10.53,-0.3,0.03,2.96,1.01,0,">1 nonsynonymous","F62V T140P",2
"lib2","SARS-CoV-2","AATCTTAGCAGAGGCA",13,165.32,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","K56R S113R N157K V173G",4
"lib2","SARS-CoV-2","AATCTTAGCGTGCTAG",8,39.95,10.91,0.07,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTTAGTAAGAAGC",3,24.51,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C61W S69G Y165G",3
"lib2","SARS-CoV-2","AATCTTATAATAACCG",14,3.11,NA,NA,NA,NA,NA,NA,"stop","F47T L95S V103* G117K",4
"lib2","SARS-CoV-2","AATCTTATGGTGATCT",1,5.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122S K128R",2
"lib2","SARS-CoV-2","AATCTTCAGAAAGTTT",3,1.11,NA,NA,NA,NA,NA,NA,"stop","E76D K94T L131*",3
"lib2","SARS-CoV-2","AATCTTCAGTACCACC",3,79.35,10.8,-0.04,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTTCATAAAACAG",4,51.94,10.32,-0.52,0.07,2.71,1.01,0,">1 nonsynonymous","A33D Y39L",2
"lib2","SARS-CoV-2","AATCTTCCAGACATAG",2,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142K G155V",2
"lib2","SARS-CoV-2","AATCTTCCGTTCCCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* D34R G83Y",3
"lib2","SARS-CoV-2","AATCTTCGGGTTCACT",2,66.78,10.35,-0.48,0.06,2.93,1.06,0,">1 nonsynonymous","S45A L60R",2
"lib2","SARS-CoV-2","AATCTTCTATCGTATT",5,77.32,10.81,-0.02,0.04,2.96,1.06,0,">1 nonsynonymous","L5E T63L",2
"lib2","SARS-CoV-2","AATCTTCTCAAACCAA",2,33.52,10.44,-0.39,0.06,2.99,1,0,">1 nonsynonymous","I2Q S43T D90L L122N",4
"lib2","SARS-CoV-2","AATCTTCTGCCATAAA",15,6.8,NA,NA,NA,NA,NA,NA,"stop","G51A L60* N110R G117W",4
"lib2","SARS-CoV-2","AATCTTGACCCATACA",7,1.6,NA,NA,NA,NA,NA,NA,"stop","V20L I80H T100M N107* G155S",5
"lib2","SARS-CoV-2","AATCTTGGGACCGATT",3,100.43,6.84,-3.99,0.3,1.5,1.17,0.01,">1 nonsynonymous","F12D N30V",2
"lib2","SARS-CoV-2","AATCTTGTATCCGATG",2,11.83,9.03,-1.81,0.31,1.5,1,0.05,">1 nonsynonymous","K94L K128Y",2
"lib2","SARS-CoV-2","AATCTTGTGGCCGCTA",4,47.22,10.91,0.07,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTTGTTATTAGCA",2,90.58,10.97,0.13,0.06,2.9,1.11,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","AATCTTTAAACCATCT",6,84.78,10.83,0,0.07,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AATCTTTACTTATAGT",1,30.64,9.66,-1.18,0.11,2.88,1.02,0.01,">1 nonsynonymous","P7S N58G K87M E135M",4
"lib2","SARS-CoV-2","AATCTTTAGCATTAGC",15,145.01,6.44,-4.39,0.38,1.5,1.16,0.01,">1 nonsynonymous","R124H F160R",2
"lib2","SARS-CoV-2","AATGAAAAAACCAATC",9,70.07,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P96C N157I",2
"lib2","SARS-CoV-2","AATGAAAAAAGTTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Y Y35F Q84L Y143F",4
"lib2","SARS-CoV-2","AATGAAAAACAAATTG",1,18.44,8.75,-2.09,0.22,1.68,1.16,0.02,">1 nonsynonymous","D34I A89V",2
"lib2","SARS-CoV-2","AATGAAAAAGTACTCT",9,153.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F134V N151V Y175E",3
"lib2","SARS-CoV-2","AATGAAAAATACTATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I P149S Q168T",3
"lib2","SARS-CoV-2","AATGAAAAATGTGAGG",12,87.37,8.17,-2.67,0.28,1.5,1.09,0.03,">1 nonsynonymous","F12N Y121M",2
"lib2","SARS-CoV-2","AATGAAAACAGATCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K87* D98T N110D P133Y G174E",5
"lib2","SARS-CoV-2","AATGAAAACTACTATT",7,53.23,10.8,-0.03,0.06,2.91,1.1,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","AATGAAAAGTCTTAAC",2,1.95,NA,NA,NA,NA,NA,NA,"stop","Y21A Y39V K48F C61*",4
"lib2","SARS-CoV-2","AATGAAAATACCTTAA",3,11.48,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A33P C49G",2
"lib2","SARS-CoV-2","AATGAAACAAAGTGTG",4,3.1,NA,NA,NA,NA,NA,NA,"stop","Y39R T55* K128G",3
"lib2","SARS-CoV-2","AATGAAACAATCGCGG",3,13.89,9.64,-1.2,0.29,1.88,1.04,0.04,"1 nonsynonymous","Y66G",1
"lib2","SARS-CoV-2","AATGAAACACAATTAT",3,24.16,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F44L F70A R124I V173C F185Y",5
"lib2","SARS-CoV-2","AATGAAACAGGGACAC",9,135.11,10.28,-0.56,0.05,2.8,1.04,0,">1 nonsynonymous","P54S S184E",2
"lib2","SARS-CoV-2","AATGAAACATATCGAG",8,118.43,10.83,0,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGAAACCACCCGTA",3,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D59I V77L G172T",4
"lib2","SARS-CoV-2","AATGAAACGCATGTGT",6,272.66,10.63,-0.2,0.02,2.92,1.06,0,">1 nonsynonymous","A42I K132S",2
"lib2","SARS-CoV-2","AATGAAACTGCTCTTT",6,73.32,10.71,-0.12,0.05,2.85,1.08,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AATGAAAGTACAATTA",2,11.49,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G86R W106V T148L Y165N",4
"lib2","SARS-CoV-2","AATGAAAGTGAACGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","AATGAAATAAACCGAG",4,110.03,10.69,-0.15,0.03,2.96,1.03,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","AATGAAATATTACCAA",7,51.72,10,-0.84,0.08,2.8,1.07,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","AATGAAATCCTGAAAC",1,83.44,9.82,-1.02,0.04,2.86,1.09,0,">1 nonsynonymous","R16N F160S P169F G174S",4
"lib2","SARS-CoV-2","AATGAAATTACGTCCT",1,3.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AATGAAATTATGAATA",7,29.11,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88R F126I P133L Y175P",4
"lib2","SARS-CoV-2","AATGAAATTCCCTTGA",5,0.49,NA,NA,NA,NA,NA,NA,"stop","I28* K56G V103Y Y119D T140H Q176R",6
"lib2","SARS-CoV-2","AATGAAATTTATTGCG",5,88.81,10.05,-0.79,0.07,2.53,1.04,0,">1 nonsynonymous","F62R D90K",2
"lib2","SARS-CoV-2","AATGAACACAGAATCT",6,7.02,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y35P K56S",2
"lib2","SARS-CoV-2","AATGAACAGCAAAAAA",1,8.45,6,-4.84,2,3,1.09,0,">1 nonsynonymous","I72P Q144S",2
"lib2","SARS-CoV-2","AATGAACATCATGCAT",3,42.77,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","D68M C102W",2
"lib2","SARS-CoV-2","AATGAACCATCCCGCA",2,26.39,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","I104P I138R P169I Y175S",4
"lib2","SARS-CoV-2","AATGAACCCCTTAATT",9,93.22,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","F167P",1
"lib2","SARS-CoV-2","AATGAACCTGAACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135F G174T",2
"lib2","SARS-CoV-2","AATGAACGAACAAAAA",5,0.3,NA,NA,NA,NA,NA,NA,"stop","V71Q V115L K132W Y159* P169*",5
"lib2","SARS-CoV-2","AATGAACGCAAAAGAC",2,7.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5R V37T P191E",3
"lib2","SARS-CoV-2","AATGAACGCGTGGTTA",15,225.54,8.63,-2.21,0.05,2.83,1.07,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","AATGAACGCTCGTACT",6,6.02,NA,NA,NA,NA,NA,NA,"stop","P54T L57* N157F",3
"lib2","SARS-CoV-2","AATGAACGGTTTCACT",4,56.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61I I88T R136Y S200Q",4
"lib2","SARS-CoV-2","AATGAACGTTGGCAAG",14,71.02,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","C6S A105V L162F",3
"lib2","SARS-CoV-2","AATGAACGTTTTAATA",2,19.55,10.91,0.07,0.06,2.97,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AATGAACTAGAATACG",6,8.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N A42N T100P T201P",4
"lib2","SARS-CoV-2","AATGAACTAGGACCAA",2,17.01,9.94,-0.9,0.1,2.74,1.16,0.01,">1 nonsynonymous","F44D D97L K132L N151D",4
"lib2","SARS-CoV-2","AATGAACTGCCGATTA",7,70.09,9.93,-0.9,0.13,2.25,1.05,0.01,">1 nonsynonymous","F12T K198L",2
"lib2","SARS-CoV-2","AATGAACTTCACTAAA",2,9.57,10.61,-0.23,0.11,2.73,1.2,0.01,">1 nonsynonymous","V32A E141G",2
"lib2","SARS-CoV-2","AATGAACTTGAAAAGG",4,36.08,10.84,0.01,0.05,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AATGAACTTTAACAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","G9C A14* V20D G83R F99*",5
"lib2","SARS-CoV-2","AATGAAGAACTTAATT",15,37.76,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","R27G F167S C195F",3
"lib2","SARS-CoV-2","AATGAAGACCTTAAAA",11,94.65,10.35,-0.49,0.06,2.64,1.07,0,">1 nonsynonymous","D75A T100A E154S",3
"lib2","SARS-CoV-2","AATGAAGATAAATATG",10,60.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F17A Y91V G174V",3
"lib2","SARS-CoV-2","AATGAAGCAGAAACAC",2,43.93,10.38,-0.46,0.05,2.93,1.1,0,">1 nonsynonymous","I2V G174K",2
"lib2","SARS-CoV-2","AATGAAGCGGTACCAG",3,1.69,NA,NA,NA,NA,NA,NA,"stop","T15G V32Y G51L Y66* F126I",5
"lib2","SARS-CoV-2","AATGAAGGAAGCGTTG",9,180.97,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19W Y39C F44P P54K",4
"lib2","SARS-CoV-2","AATGAAGGTCTCAAGG",9,171.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V20E V77H T85P",3
"lib2","SARS-CoV-2","AATGAAGTAAACTCAT",2,23.38,8.71,-2.13,0.27,1.5,1.17,0.02,">1 nonsynonymous","N64R K114T P133N G152S S200V",5
"lib2","SARS-CoV-2","AATGAAGTGTACGATC",3,55.84,8.59,-2.25,0.19,1.5,1.06,0.01,">1 nonsynonymous","D97H V103L",2
"lib2","SARS-CoV-2","AATGAAGTTATATACA",8,34.92,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S19E V181F",2
"lib2","SARS-CoV-2","AATGAAGTTATCATTC",4,27.05,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S45T I88S K132Y",3
"lib2","SARS-CoV-2","AATGAATACATCGCTA",4,111.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35G G86L P133N",3
"lib2","SARS-CoV-2","AATGAATACGCGAGAT",5,44.54,9.78,-1.05,0.11,2.18,1,0.01,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","AATGAATCAATGGAGC",1,28.8,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S19L R25L N64S Y175F",4
"lib2","SARS-CoV-2","AATGAATCATACGGAA",2,43.24,8.93,-1.91,0.11,2.64,1.13,0,">1 nonsynonymous","A18T Y66F Y119V Q163K",4
"lib2","SARS-CoV-2","AATGAATCCTCAAAAG",4,137.62,9.43,-1.41,0.03,2.91,1.1,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","AATGAATCGACGTATG",13,202.53,10.06,-0.78,0.05,2.69,1.09,0,">1 nonsynonymous","G9T K56P",2
"lib2","SARS-CoV-2","AATGAATGATCAATGA",4,42.62,6.18,-4.65,0.6,1.58,1.15,0.01,">1 nonsynonymous","Y143K E154D",2
"lib2","SARS-CoV-2","AATGAATGCTTAGTAA",7,23.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D34L I80E P96C W106S",4
"lib2","SARS-CoV-2","AATGAATTAACCTTGA",1,928.96,10.06,-0.77,0.04,2.61,1,0,">1 nonsynonymous","A14N L60V Q144D",3
"lib2","SARS-CoV-2","AATGAATTAGACAGTC",4,0.83,NA,NA,NA,NA,NA,NA,"stop","P96I N107L Y119T C150*",4
"lib2","SARS-CoV-2","AATGAATTAGCATTGG",3,39.54,9.49,-1.35,0.08,1.79,1.11,0,">1 nonsynonymous","D90L S139L",2
"lib2","SARS-CoV-2","AATGAATTCAATGTGA",2,0.33,NA,NA,NA,NA,NA,NA,"stop","P7V L122F K132W G155V C195* K199T",6
"lib2","SARS-CoV-2","AATGAATTGAAAATAG",5,38.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6M W23S Y35R F44V E76S K199L",6
"lib2","SARS-CoV-2","AATGAATTTCTCATGA",5,37,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","C6L N92I T140S",3
"lib2","SARS-CoV-2","AATGACAAAACACGAT",1,30.71,10.82,-0.01,0.07,2.89,1.14,0,">1 nonsynonymous","N24K C61N",2
"lib2","SARS-CoV-2","AATGACAAACATCATA",10,132.91,10.14,-0.69,0.05,2.86,1.06,0,">1 nonsynonymous","Y35D T201L",2
"lib2","SARS-CoV-2","AATGACAAACCGACCC",1,33.42,9.72,-1.12,0.12,1.98,1.13,0.01,"1 nonsynonymous","F17T",1
"lib2","SARS-CoV-2","AATGACAAACTAACAA",6,106.26,10.39,-0.44,0.04,2.89,1.1,0,"1 nonsynonymous","Y35P",1
"lib2","SARS-CoV-2","AATGACAACAAATTAG",23,352.7,10.41,-0.43,0.04,2.94,1.05,0,">1 nonsynonymous","L111Q S139N F160P",3
"lib2","SARS-CoV-2","AATGACAACAATACAT",5,30.93,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K56L A89R D97P T140V K198L",5
"lib2","SARS-CoV-2","AATGACAAGAATGACC",3,16.91,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V103R K114L G166C H189L",4
"lib2","SARS-CoV-2","AATGACAATAATAACC",6,118.29,9.45,-1.38,0.1,1.74,1.07,0,">1 nonsynonymous","I2N P82R E141D",3
"lib2","SARS-CoV-2","AATGACAATATCTTAC",4,80.77,10.56,-0.28,0.09,2.78,1.12,0,">1 nonsynonymous","F12L Y35L T55F",3
"lib2","SARS-CoV-2","AATGACAATTCCTTGA",2,17.19,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9K W106D D137I",3
"lib2","SARS-CoV-2","AATGACAATTTGAATC",6,104.31,10.8,-0.04,0.09,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGACACCCCAAGAC",2,15.37,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y50T Y91T L95M G152N",4
"lib2","SARS-CoV-2","AATGACACCTTCACTA",4,286.89,10.29,-0.55,0.03,2.88,1.02,0,">1 nonsynonymous","S29V A105T",2
"lib2","SARS-CoV-2","AATGACACTGATGTAA",16,170.7,10.84,0.01,0.05,2.97,1.05,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","AATGACAGCCTCGAGG",2,20.62,10.55,-0.29,0.12,2.82,1.2,0.01,"synonymous","",0
"lib2","SARS-CoV-2","AATGACAGCTGGTATA",1,82.71,9.6,-1.24,0.05,2.94,1.1,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","AATGACAGTGGTAGCT",16,145,10.8,-0.03,0.05,2.95,1.07,0,">1 nonsynonymous","E10D F62A",2
"lib2","SARS-CoV-2","AATGACATAAAACCAT",1,9.12,6.2,-4.63,0.8,3,1.1,0.03,">1 nonsynonymous","Y93H Y143G",2
"lib2","SARS-CoV-2","AATGACATCGCGCCGA",1,6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6W R27C N40Y N92R E135K",5
"lib2","SARS-CoV-2","AATGACATTAATAAAT",4,0.67,NA,NA,NA,NA,NA,NA,"stop","N120* A145T",2
"lib2","SARS-CoV-2","AATGACATTAGTACCA",4,31.25,10.77,-0.07,0.07,2.97,1.01,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","AATGACCAAAAACACA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36T C61* Q79G A105G",4
"lib2","SARS-CoV-2","AATGACCATACTTTCA",3,98.77,10.13,-0.71,0.06,2.63,1.1,0,">1 nonsynonymous","D90I K199N T201K",3
"lib2","SARS-CoV-2","AATGACCATTTTAACG",3,0.72,NA,NA,NA,NA,NA,NA,"stop","S41V F47L V103K T201*",4
"lib2","SARS-CoV-2","AATGACCCACGCATTT",1,75.49,10.44,-0.4,0.04,2.91,1.02,0,">1 nonsynonymous","S43F Q84L",2
"lib2","SARS-CoV-2","AATGACCCCGTCACTA",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S L122R",2
"lib2","SARS-CoV-2","AATGACCCGCCATTAT",2,4.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","AATGACCCGGTTGATA",2,26.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39C A89C W106C",3
"lib2","SARS-CoV-2","AATGACCGATATAAAC",7,2.93,NA,NA,NA,NA,NA,NA,"stop","W23* V71L D90V I104*",4
"lib2","SARS-CoV-2","AATGACCTGCATTGTG",1,18.61,10.15,-0.68,0.11,2.78,1.03,0.01,"1 nonsynonymous","D59W",1
"lib2","SARS-CoV-2","AATGACGAATAACGCT",5,28.38,9.69,-1.15,0.06,2.84,1.16,0,"1 nonsynonymous","K114P",1
"lib2","SARS-CoV-2","AATGACGACCTCTTAC",4,67.85,6,-4.84,0.72,2.1,1.13,0,">1 nonsynonymous","F12W N157R",2
"lib2","SARS-CoV-2","AATGACGAGAAGGGCA",4,46.44,9.76,-1.08,0.04,2.8,1.04,0,">1 nonsynonymous","F8Y N109L Y121L",3
"lib2","SARS-CoV-2","AATGACGAGTCCCGCA",1,8.49,6.31,-4.52,2,1.5,1.04,0.05,">1 nonsynonymous","N4M V65A L95G Y123D",4
"lib2","SARS-CoV-2","AATGACGATTAGAAAT",2,39.85,9.97,-0.87,0.08,2.97,1,0,">1 nonsynonymous","E10A Q168T",2
"lib2","SARS-CoV-2","AATGACGCGACCTCGC",6,72.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N30V S41P G83R Y93S L188S",5
"lib2","SARS-CoV-2","AATGACGCTGCCCGAA",1,11.64,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A14V W23R Q168V",3
"lib2","SARS-CoV-2","AATGACGGCAATGTTA",2,71.09,10.7,-0.13,0.04,2.94,1.08,0,">1 nonsynonymous","A14K T201R",2
"lib2","SARS-CoV-2","AATGACTAAAAGGATA",8,117.62,10.42,-0.41,0.06,2.97,1.01,0,">1 nonsynonymous","K56S P96N",2
"lib2","SARS-CoV-2","AATGACTAATACACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S45N K56* S69T K114S",4
"lib2","SARS-CoV-2","AATGACTAATGGAACC",4,14.39,6,-4.84,1.19,3,1.11,0.02,">1 nonsynonymous","G9L R124A V153G",3
"lib2","SARS-CoV-2","AATGACTACAACTAAC",22,329.73,8.94,-1.9,0.05,2.92,1.08,0,">1 nonsynonymous","C61L D97G Y119P",3
"lib2","SARS-CoV-2","AATGACTAGAAAACAA",6,64.29,10.31,-0.52,0.03,2.86,1.03,0,">1 nonsynonymous","L38F S41P F47M",3
"lib2","SARS-CoV-2","AATGACTAGATGTGCC",3,87.69,10.22,-0.62,0.05,2.92,1.05,0,">1 nonsynonymous","A42V P169V",2
"lib2","SARS-CoV-2","AATGACTATAAACGAT",7,86.95,6,-4.84,2,1.5,1.36,0.04,">1 nonsynonymous","T3V G86V F126V F156L",4
"lib2","SARS-CoV-2","AATGACTCAAGTAGTC",7,30.01,6,-4.84,2,3,1.1,0,">1 nonsynonymous","E76L P96D R127C Y143M P177V",5
"lib2","SARS-CoV-2","AATGACTCCTCCGGCA",2,9.39,8.97,-1.87,0.06,3,1.01,0,">1 nonsynonymous","T55S A105G Y119N",3
"lib2","SARS-CoV-2","AATGACTCGAAAAATA",1,60.34,9.73,-1.11,0.09,2.34,1,0,">1 nonsynonymous","E135W E154I",2
"lib2","SARS-CoV-2","AATGACTCTTAAGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib2","SARS-CoV-2","AATGACTGAATCTAGC",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y F44C A81L V103M A105D K114L G146R",7
"lib2","SARS-CoV-2","AATGACTGCATAGAAA",4,11.68,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","F8D S19T F99I F156Y",4
"lib2","SARS-CoV-2","AATGACTTATCAAAAC",11,212.99,10.75,-0.09,0.04,2.9,1.1,0,"1 nonsynonymous","T55W",1
"lib2","SARS-CoV-2","AATGACTTGCCTTGAT",1,26.02,8.68,-2.16,0.27,1.8,1.04,0.02,">1 nonsynonymous","N58S D137N",2
"lib2","SARS-CoV-2","AATGACTTTAATACTA",7,45.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S43V Y178P",2
"lib2","SARS-CoV-2","AATGAGAAAATCCTTA",5,154.13,10.83,-0.01,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGAGAACAACAGAT",8,34.56,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C61Y F70W Y121N",3
"lib2","SARS-CoV-2","AATGAGAAGAGAGACT",3,49.96,6,-4.84,1.67,1.5,1.21,0.03,">1 nonsynonymous","I28R R136F A190S P197R",4
"lib2","SARS-CoV-2","AATGAGAATACACCCT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","S147*",1
"lib2","SARS-CoV-2","AATGAGAATATAAGGC",5,71.67,9.44,-1.4,0.05,2.93,1.07,0,">1 nonsynonymous","Y119S S200G",2
"lib2","SARS-CoV-2","AATGAGAATGAGATGA",6,0.67,NA,NA,NA,NA,NA,NA,"stop","Y93* T100M",2
"lib2","SARS-CoV-2","AATGAGAATTGGCATA",1,8.35,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","I2S V37R N58H G86Y G101D",5
"lib2","SARS-CoV-2","AATGAGACACACCTAC",3,9.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S43R T85H D137R",4
"lib2","SARS-CoV-2","AATGAGACGCTAAGGA",3,9.43,9.34,-1.5,0.38,1.58,1.27,0.03,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","AATGAGAGACAATAAT",8,194.69,8.52,-2.32,0.07,1.92,1.1,0,">1 nonsynonymous","C6K N13Y F126V",3
"lib2","SARS-CoV-2","AATGAGAGGCACGAGA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y Y50E F99C S113K T148V N171S",6
"lib2","SARS-CoV-2","AATGAGATCTATTGAA",2,26.79,10.68,-0.15,0.08,2.96,1.04,0,"1 nonsynonymous","T63D",1
"lib2","SARS-CoV-2","AATGAGCACTCACTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104Y E135L Y159A",3
"lib2","SARS-CoV-2","AATGAGCAGTTCGATA",6,161.36,9.19,-1.65,0.04,2.94,1.05,0,"1 nonsynonymous","G117Y",1
"lib2","SARS-CoV-2","AATGAGCATCTTAAAA",6,142.7,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F160T G172L P177L",3
"lib2","SARS-CoV-2","AATGAGCCAGCGTACG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35L G86* S129P",3
"lib2","SARS-CoV-2","AATGAGCCCGGATGCG",1,44.31,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S36L E76G W106G T170A",4
"lib2","SARS-CoV-2","AATGAGCCCTAACGAG",1,0.63,NA,NA,NA,NA,NA,NA,"stop","Y119* R179T",2
"lib2","SARS-CoV-2","AATGAGCCGATCAATA",2,17.15,9.13,-1.71,0.34,1.5,1.01,0.08,"1 nonsynonymous","C102Y",1
"lib2","SARS-CoV-2","AATGAGCTGCTGTAAA",2,89.15,10.8,-0.04,0.04,2.9,1.12,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","AATGAGCTTATCTAGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114W",1
"lib2","SARS-CoV-2","AATGAGGAAAAACAGA",3,45.98,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S36P K114N D137V",3
"lib2","SARS-CoV-2","AATGAGGAACCAGCAT",6,0.43,NA,NA,NA,NA,NA,NA,"stop","F8* V37*",2
"lib2","SARS-CoV-2","AATGAGGAAGTCTCAG",3,36.41,10.28,-0.56,0.07,2.77,1,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","AATGAGGAGGAGATGT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y L57A Y66L",3
"lib2","SARS-CoV-2","AATGAGGGATGTGCAA",4,7.64,NA,NA,NA,NA,NA,NA,"stop","K114* C150H",2
"lib2","SARS-CoV-2","AATGAGTAAGTGTCCA",1,7.42,9.55,-1.29,0.21,1.92,1.01,0.02,"1 nonsynonymous","F12D",1
"lib2","SARS-CoV-2","AATGAGTACCTCTCCA",2,20.02,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D112K I142H",2
"lib2","SARS-CoV-2","AATGAGTAGAAATGAT",3,41.25,9.1,-1.74,0.17,1.81,1.11,0.01,">1 nonsynonymous","C6L E141W",2
"lib2","SARS-CoV-2","AATGAGTATTGTTACA",3,29.85,6.01,-4.83,1.15,2.01,1.22,0.02,">1 nonsynonymous","W23G K26E C31T V180I",4
"lib2","SARS-CoV-2","AATGAGTCGCGAAATT",2,17.62,6,-4.84,2,3,1.07,0,">1 nonsynonymous","I28F I80T K128I C158H",4
"lib2","SARS-CoV-2","AATGAGTCGTTTAAGT",6,103.03,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8W A14F V77M N107F K128E",5
"lib2","SARS-CoV-2","AATGAGTGCCAAAAGG",5,2.81,NA,NA,NA,NA,NA,NA,"stop","A18F L95*",2
"lib2","SARS-CoV-2","AATGAGTTTAAATACA",1,11.45,10.42,-0.41,0.09,2.82,1.21,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","AATGATAAAGAACAAC",1,8.62,6.58,-4.25,2,1.5,1.13,0.03,">1 nonsynonymous","L5M N58T I104P N151M",4
"lib2","SARS-CoV-2","AATGATAAAGTAATGC",2,13.87,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","L60T N64A V77S P82N G146M",5
"lib2","SARS-CoV-2","AATGATAAATAGACAA",5,48.42,6,-4.84,1.13,1.5,1.11,0,">1 nonsynonymous","S113G D137L",2
"lib2","SARS-CoV-2","AATGATAACACTTTAG",2,80.84,10.18,-0.65,0.04,2.99,1.04,0,">1 nonsynonymous","I138N T170Q T201V",3
"lib2","SARS-CoV-2","AATGATAACCCCTATA",9,78.15,6,-4.84,2,3,1.2,0,">1 nonsynonymous","W23S L60Q P96L",3
"lib2","SARS-CoV-2","AATGATAAGACCAAAT",26,109.47,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I88K V103F L122G",3
"lib2","SARS-CoV-2","AATGATAAGAGCAAAG",21,68.2,6.28,-4.55,0.83,1.5,1.23,0.03,">1 nonsynonymous","F44H L95P",2
"lib2","SARS-CoV-2","AATGATAAGGTGACTG",6,45.2,7.88,-2.95,0.14,1.69,1.13,0.01,">1 nonsynonymous","G86L N120D T201L",3
"lib2","SARS-CoV-2","AATGATAAGGTTACTA",3,31.84,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F8K S69P P96Q N107I",4
"lib2","SARS-CoV-2","AATGATAATGATAGCT",2,44.84,10.72,-0.12,0.04,3,1,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","AATGATACTAAAAATA",13,58.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49K D68L Y119R Y159P",4
"lib2","SARS-CoV-2","AATGATACTAAGTACT",3,32.52,10.74,-0.1,0.08,2.81,1.22,0,"1 nonsynonymous","S147A",1
"lib2","SARS-CoV-2","AATGATAGAAAATTAA",5,23.71,10.35,-0.49,0.09,2.97,1.04,0,">1 nonsynonymous","S43N G83D",2
"lib2","SARS-CoV-2","AATGATATAAAAAACC",13,216.05,10.6,-0.24,0.03,2.96,1.04,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","AATGATATCCCCCGAC",4,74.46,10.28,-0.55,0.04,2.8,1,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","AATGATATCGAACCCT",1,65.12,10.75,-0.09,0.04,2.96,1.07,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","AATGATATCGATAGAT",7,0.27,NA,NA,NA,NA,NA,NA,"stop","L5H N40V T85* P96L N107T E154F",6
"lib2","SARS-CoV-2","AATGATATGCGCTAAT",1,17.53,10.48,-0.36,0.08,3,1,0,">1 nonsynonymous","N1D V115G T148L",3
"lib2","SARS-CoV-2","AATGATATGCGGGGAA",5,4.86,NA,NA,NA,NA,NA,NA,"stop","A14* C61S",2
"lib2","SARS-CoV-2","AATGATATTTGACATT",4,4.36,NA,NA,NA,NA,NA,NA,"stop","V11L C49* K94H C102K G152I",5
"lib2","SARS-CoV-2","AATGATCAAACCATTT",7,124.18,9.3,-1.54,0.05,1.73,1.08,0,">1 nonsynonymous","F8E Y35S S41R V173I",4
"lib2","SARS-CoV-2","AATGATCAAATTCAAG",4,26.23,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","C6L S19Q F99G N118P S200N",5
"lib2","SARS-CoV-2","AATGATCAAGGGACGC",3,34.86,10.19,-0.65,0.04,2.99,1,0,">1 nonsynonymous","G155V F160R",2
"lib2","SARS-CoV-2","AATGATCAATATGAAT",2,22.71,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","G101Y G117F S129G A192T",4
"lib2","SARS-CoV-2","AATGATCACTACCCAC",2,31.44,10.7,-0.13,0.05,2.81,1.21,0,"1 nonsynonymous","S29G",1
"lib2","SARS-CoV-2","AATGATCCAAATAACA",9,31.21,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D59A I88W K94V G146M",4
"lib2","SARS-CoV-2","AATGATCCGGGATTAC",3,60.34,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","L5A S29T K94G P177E",4
"lib2","SARS-CoV-2","AATGATCTTATACCCA",17,134.66,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35E D90C G152C",3
"lib2","SARS-CoV-2","AATGATCTTATATGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* S113R P149Q",3
"lib2","SARS-CoV-2","AATGATGATATAGTTA",7,37.21,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L57F Y91L D137P",3
"lib2","SARS-CoV-2","AATGATGGGGAGTGAT",3,61.01,9.67,-1.17,0.07,2.3,1.05,0,">1 nonsynonymous","G9L L60I R136M",3
"lib2","SARS-CoV-2","AATGATGGTCGATTCC",4,70.28,10.29,-0.54,0.06,2.86,1.04,0,">1 nonsynonymous","T85M D90C",2
"lib2","SARS-CoV-2","AATGATGTATTTCTGA",2,11.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","AATGATGTTTAATCAC",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58G T85M Y91N Q144A P149H",5
"lib2","SARS-CoV-2","AATGATTAGAATTACT",5,13.56,8.32,-2.52,0.36,1.5,1,0.08,">1 nonsynonymous","A14F G51Q A145R C158V S184T",5
"lib2","SARS-CoV-2","AATGATTCAACCAGTA",2,62.05,6.08,-4.75,1.11,1.5,1.17,0.02,">1 nonsynonymous","Y39I N157Y G166V",3
"lib2","SARS-CoV-2","AATGATTCGAGCAGTA",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A42F G86T G117M F156S",5
"lib2","SARS-CoV-2","AATGATTGGATGGCTA",8,145.08,9.95,-0.89,0.04,2.89,1.03,0,"1 nonsynonymous","Q176H",1
"lib2","SARS-CoV-2","AATGATTTAAACGACT",1,9.92,11.03,0.19,0.11,2.93,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATGATTTTTCTATAA",6,70.82,10.68,-0.15,0.03,2.98,1.04,0,"1 nonsynonymous","T46F",1
"lib2","SARS-CoV-2","AATGCAAACAAATAAG",3,9.13,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","Q84L W106L F167Q",3
"lib2","SARS-CoV-2","AATGCAAAGAGTAACT",4,1.57,NA,NA,NA,NA,NA,NA,"stop","C6* T55N E141I",3
"lib2","SARS-CoV-2","AATGCAAAGGACGGGA",7,38.59,8.67,-2.17,0.39,1.5,1.03,0.08,">1 nonsynonymous","L5R C49E Q163G T201E",4
"lib2","SARS-CoV-2","AATGCAAATGAAAGGT",2,52.06,10.86,0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCAAATGATGCAT",7,73.22,9.05,-1.78,0.14,1.84,1.09,0.01,">1 nonsynonymous","F8D A14N F62V P149T G174S",5
"lib2","SARS-CoV-2","AATGCAAATGCTCCAG",17,96.87,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C49F Y91Q",2
"lib2","SARS-CoV-2","AATGCAACAATAGGCC",6,110.85,9.61,-1.22,0.04,2.93,1.06,0,"1 nonsynonymous","F126I",1
"lib2","SARS-CoV-2","AATGCAACATAAATCA",1,20.95,6.88,-3.96,0.29,1.96,1.09,0.02,">1 nonsynonymous","D34R S41H K56L P96T",4
"lib2","SARS-CoV-2","AATGCAACATATACCA",5,57.33,8.04,-2.8,0.18,1.5,1.11,0.01,">1 nonsynonymous","I2L G51A G117W",3
"lib2","SARS-CoV-2","AATGCAACATTTAGGT",1,18.24,10.93,0.09,0.08,3,1,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","AATGCAACGCAGTAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4T E10V K94* Q144H P161Q",5
"lib2","SARS-CoV-2","AATGCAACTGCAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","F12R A33E S41V Y159*",4
"lib2","SARS-CoV-2","AATGCAAGCAAAATAG",2,8.98,10.64,-0.19,0.06,2.9,1.12,0,">1 nonsynonymous","T3S D97H",2
"lib2","SARS-CoV-2","AATGCAAGCAACATGA",11,71.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91I G174I V181F",3
"lib2","SARS-CoV-2","AATGCAAGGCGTTTTG",1,29.02,9.51,-1.33,0.11,2.47,1.07,0.01,">1 nonsynonymous","D90T A145I",2
"lib2","SARS-CoV-2","AATGCAAGTGTGCCTT",3,62.89,8.08,-2.76,0.19,1.72,1.1,0.01,">1 nonsynonymous","A67S G155P",2
"lib2","SARS-CoV-2","AATGCAATAAATTACA",3,27.89,10,-0.84,0.19,2.27,1.11,0.02,">1 nonsynonymous","S41Y F47M D90H N130M",4
"lib2","SARS-CoV-2","AATGCAATACAGAAAA",2,16.34,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","Y39K A89K N107S E141S",4
"lib2","SARS-CoV-2","AATGCAATACGATCCA",11,192.77,10.26,-0.57,0.03,2.99,1.03,0,">1 nonsynonymous","L125G K132L P197K",3
"lib2","SARS-CoV-2","AATGCAATCTCAACAG",8,171.28,10.38,-0.46,0.02,2.82,1.09,0,">1 nonsynonymous","I2P D97V S184R",3
"lib2","SARS-CoV-2","AATGCAATGGAAACAT",3,94.91,10.79,-0.05,0.03,2.92,1.09,0,"1 nonsynonymous","K199G",1
"lib2","SARS-CoV-2","AATGCAATGGATAGAA",1,61.8,10.77,-0.06,0.06,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AATGCACAGAGAAATA",1,9.98,8.3,-2.54,0.18,2.38,1.1,0.01,">1 nonsynonymous","C61L N157F",2
"lib2","SARS-CoV-2","AATGCACATTCCCGCG",2,41.4,8.6,-2.24,0.08,2.64,1.09,0,">1 nonsynonymous","K94A S113T",2
"lib2","SARS-CoV-2","AATGCACCAACTAATT",7,85.26,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G101S Y175V",2
"lib2","SARS-CoV-2","AATGCACCACACCGCG",3,67.53,8.42,-2.41,0.16,2.53,1.16,0.01,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","AATGCACTAAATCCTA",11,116.64,10.71,-0.13,0.03,2.95,1.04,0,">1 nonsynonymous","A42N S43Y",2
"lib2","SARS-CoV-2","AATGCAGAAATGTACC",1,77.58,10.29,-0.55,0.06,2.67,1.05,0,">1 nonsynonymous","F134L P149L E154K",3
"lib2","SARS-CoV-2","AATGCAGACAAAGATT",5,35.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A89D P96M R136S",3
"lib2","SARS-CoV-2","AATGCAGATGAACCAA",2,12.88,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","AATGCAGCATGTAGAA",10,148.45,7.51,-3.33,0.14,1.5,1.13,0.01,">1 nonsynonymous","E10N I80M Y119N",3
"lib2","SARS-CoV-2","AATGCAGCCCCAGATT",4,31.52,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V77A R127E P133T",3
"lib2","SARS-CoV-2","AATGCAGGCCGTAAAA",4,47.85,6,-4.84,0.94,1.5,1.07,0.01,">1 nonsynonymous","L60K D68V A89T F99M I104F N110A N120Q",7
"lib2","SARS-CoV-2","AATGCAGTAGAATGTT",2,1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","AATGCAGTCACCAAAT",4,16.86,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","P7C N64T T85C F167I",4
"lib2","SARS-CoV-2","AATGCAGTCACTTAAT",5,6,9.3,-1.54,0.07,2.01,1.03,0,">1 nonsynonymous","N4V A81G T100V N120V S139G G152S",6
"lib2","SARS-CoV-2","AATGCAGTTTTTTGAT",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P C49K",2
"lib2","SARS-CoV-2","AATGCATACCCAAACC",3,57.36,9.27,-1.57,0.11,1.85,1.1,0,">1 nonsynonymous","Y50N S184H",2
"lib2","SARS-CoV-2","AATGCATATCTGTAAC",4,49.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44N Y50C Y93C L95T W106R L162W",6
"lib2","SARS-CoV-2","AATGCATATTCCATAT",3,61.51,10.95,0.12,0.06,2.95,1.04,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","AATGCATCAGTAGGGA",4,36.47,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y50C D90H V103W S139L",4
"lib2","SARS-CoV-2","AATGCATCATAGTAAA",3,31.37,10.75,-0.09,0.05,3,1.01,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AATGCATCTAAGTAAA",2,19.17,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S29V I88T L131R P177S L188T",5
"lib2","SARS-CoV-2","AATGCATGCAGACGTA",2,17.71,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C49S F99Y V115L Y143R V173A",5
"lib2","SARS-CoV-2","AATGCATGCTAAAGTA",2,64.79,7.72,-3.11,0.13,1.66,1.07,0.01,">1 nonsynonymous","F99H Y119R F160P",3
"lib2","SARS-CoV-2","AATGCATGTATGTTTG",4,18.69,10.83,-0.01,0.07,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCATGTTGGCGAA",3,58.74,10.56,-0.27,0.05,2.94,1.06,0,">1 nonsynonymous","Y39T F47C",2
"lib2","SARS-CoV-2","AATGCATGTTGGGTTA",2,24.1,10.62,-0.21,0.05,2.94,1.07,0,">1 nonsynonymous","C61P P197L",2
"lib2","SARS-CoV-2","AATGCATTAATCAAAA",2,89.3,10.15,-0.69,0.06,2.96,1.04,0,">1 nonsynonymous","Y35L K87T Y121M",3
"lib2","SARS-CoV-2","AATGCATTCGGTTGCC",5,28.53,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","E10V D97N C102R",3
"lib2","SARS-CoV-2","AATGCATTGGAATAAT",2,95.81,9.48,-1.36,0.11,1.84,1.08,0,">1 nonsynonymous","K48C D137E P197S",3
"lib2","SARS-CoV-2","AATGCATTGTTCACCA",5,99.99,10.45,-0.39,0.06,2.92,1.05,0,">1 nonsynonymous","P54N L60A",2
"lib2","SARS-CoV-2","AATGCATTTTACAAGG",5,42.73,9.62,-1.22,0.1,2.09,1,0.01,">1 nonsynonymous","G83S Y91A",2
"lib2","SARS-CoV-2","AATGCCAAAATCACAC",1,40.71,10.34,-0.5,0.06,2.96,1.01,0,"1 nonsynonymous","E135N",1
"lib2","SARS-CoV-2","AATGCCAAACTAGACC",3,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59W E76P E135L",3
"lib2","SARS-CoV-2","AATGCCAACATACCAT",4,67.78,10.71,-0.12,0.06,2.98,1.07,0,">1 nonsynonymous","V37N C61D S164A",3
"lib2","SARS-CoV-2","AATGCCAACTCCGACG",4,39.08,7.43,-3.41,0.42,1.5,1.13,0.05,">1 nonsynonymous","R25A K56A K132S",3
"lib2","SARS-CoV-2","AATGCCAAGAAATGGC",1,17.93,6,-4.84,2,3,1.13,0.01,"1 nonsynonymous","I104P",1
"lib2","SARS-CoV-2","AATGCCAAGAATTATA",1,7.45,10.75,-0.09,0.11,3,1.03,0.01,">1 nonsynonymous","S129G C195S",2
"lib2","SARS-CoV-2","AATGCCAAGCACGTTT",6,89.23,9.54,-1.29,0.03,2.94,1.03,0,">1 nonsynonymous","S53Y G146T",2
"lib2","SARS-CoV-2","AATGCCAAGGGAATTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120R F134S E141W S147T F156I",5
"lib2","SARS-CoV-2","AATGCCAATATTGCAG",3,9.14,NA,NA,NA,NA,NA,NA,"stop","I28S G74* T85A P149V",4
"lib2","SARS-CoV-2","AATGCCAGACCTCTAA",4,51.18,9.76,-1.07,0.09,2.09,1.08,0,">1 nonsynonymous","S45I G146A",2
"lib2","SARS-CoV-2","AATGCCAGAGGTAGTG",10,148.55,9.14,-1.7,0.04,2.89,1.11,0,"1 nonsynonymous","G166R",1
"lib2","SARS-CoV-2","AATGCCATAATTCAGT",4,29.05,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L38V I88M L131R",3
"lib2","SARS-CoV-2","AATGCCCGAAGAGTAA",10,163.69,10.12,-0.72,0.06,2.72,1.03,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","AATGCCCGAATAGTTT",9,639.96,8.76,-2.08,0.05,2.92,1.06,0,">1 nonsynonymous","C61F Y119D G166F",3
"lib2","SARS-CoV-2","AATGCCCGATACAGAG",8,4.86,NA,NA,NA,NA,NA,NA,"stop","C6* Y21W Y50M",3
"lib2","SARS-CoV-2","AATGCCCGGAATCCTG",3,86.05,6,-4.84,1.41,1.5,1.13,0.02,">1 nonsynonymous","K26E Y50P N58P D90M Y178G",5
"lib2","SARS-CoV-2","AATGCCCGGGCTCTTA",2,21,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W106H C158V",2
"lib2","SARS-CoV-2","AATGCCCGGGCTTTGA",4,64.34,10.9,0.06,0.07,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCCCGTCTAGTAC",3,18.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S69G S129C S139I",3
"lib2","SARS-CoV-2","AATGCCCGTGATGACA",12,135.53,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S19T V37T T63C Y93H D97E",5
"lib2","SARS-CoV-2","AATGCCCTAATTGTGC",3,36.92,10.54,-0.3,0.04,2.9,1.11,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","AATGCCCTCCTGATGG",9,1.23,NA,NA,NA,NA,NA,NA,"stop","L60P F134*",2
"lib2","SARS-CoV-2","AATGCCCTTGCGAGGA",8,23.45,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F47A L95Q N107K S129Y N151F F160S",6
"lib2","SARS-CoV-2","AATGCCGCACCCCGGG",3,32.23,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A81Y Y91R F134W Y165W T170A",5
"lib2","SARS-CoV-2","AATGCCGGCTTGATAA",1,2.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","AATGCCGTCTTAGAAC",5,16.4,6,-4.84,2,1.5,1.22,0.05,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","AATGCCGTTTGTGTTA",4,189.37,6.42,-4.41,0.25,1.5,1.12,0,">1 nonsynonymous","C150L A190R",2
"lib2","SARS-CoV-2","AATGCCTAAAATCTGA",7,29.6,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T3S L38S K56L K87H W106H L122P E141T",7
"lib2","SARS-CoV-2","AATGCCTCACTCGGAC",6,143.85,10.33,-0.51,0.03,2.9,1.03,0,">1 nonsynonymous","F12I N24V N130A",3
"lib2","SARS-CoV-2","AATGCCTGACAATACA",8,54.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99R A105Y",2
"lib2","SARS-CoV-2","AATGCCTGAGTCGGAT",6,37.65,10.69,-0.15,0.03,2.99,1.02,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","AATGCCTTAACATTGG",6,28.52,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N1L I80Y G155E",3
"lib2","SARS-CoV-2","AATGCCTTACGTTGTC",3,175.51,10.63,-0.21,0.06,2.8,1.08,0,"1 nonsynonymous","Y39P",1
"lib2","SARS-CoV-2","AATGCGAAGGAAACAA",9,180.04,10.87,0.03,0.07,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCGAGATGCCTAT",1,5.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107T P191F",2
"lib2","SARS-CoV-2","AATGCGAGTCTGAGAA",6,114.25,10.84,0.01,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCGCAGCCGAAGG",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84S D98F I138V",3
"lib2","SARS-CoV-2","AATGCGCATGAACCGC",1,14.65,8.29,-2.55,0.12,2.38,1,0.01,">1 nonsynonymous","E10L N107D",2
"lib2","SARS-CoV-2","AATGCGCCCTATAACA",22,236.67,7.36,-3.48,0.21,1.5,1.08,0.01,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","AATGCGCCTCACTTAT",2,18.49,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N13I G51K D97L T100I Y119Q",5
"lib2","SARS-CoV-2","AATGCGCTACGCTGTA",3,123.9,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N24S E154L Q176F",3
"lib2","SARS-CoV-2","AATGCGCTCGCAACGG",3,49.74,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I104G S113V Y123V I142L",4
"lib2","SARS-CoV-2","AATGCGGACTTGGCAA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F44W G51K P82A A89V K128R Q168R",7
"lib2","SARS-CoV-2","AATGCGGCACCAAGAA",4,4.53,NA,NA,NA,NA,NA,NA,"stop","C6V F17T S41L F99R G117L K128F D137Y T148* G152Y L162N T201K",11
"lib2","SARS-CoV-2","AATGCGGCGTGAATAC",5,27.81,10.76,-0.08,0.08,2.79,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCGGCTGATCCAA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I Y143S",2
"lib2","SARS-CoV-2","AATGCGGGCTAGCCTT",1,20.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16S F44L R124H Y143R P161H",5
"lib2","SARS-CoV-2","AATGCGGTCCAAGTCA",2,10.57,10.49,-0.35,0.23,2.23,1.1,0.02,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","AATGCGTAACTGCGCA",9,81.79,10.82,-0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCGTCAATTAATG",7,0.13,NA,NA,NA,NA,NA,NA,"stop","F47L T55L T170*",3
"lib2","SARS-CoV-2","AATGCGTCTCTCTGGC",1,27.85,9.86,-0.98,0.15,2.39,1.13,0.01,">1 nonsynonymous","F62W I104G",2
"lib2","SARS-CoV-2","AATGCGTTACAACTCA",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S G86Q W106K K128W",4
"lib2","SARS-CoV-2","AATGCTAAAACAAATC",2,78.84,10.65,-0.19,0.02,2.98,1.02,0,"1 nonsynonymous","P54C",1
"lib2","SARS-CoV-2","AATGCTAAAATTAAAT",12,149.35,10.79,-0.05,0.02,2.94,1.06,0,"1 nonsynonymous","V32F",1
"lib2","SARS-CoV-2","AATGCTACTATACTAC",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121N F185A",2
"lib2","SARS-CoV-2","AATGCTACTATTGACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","G9P L38P T201*",3
"lib2","SARS-CoV-2","AATGCTAGGATATTCT",2,22.14,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F70S Y119F",2
"lib2","SARS-CoV-2","AATGCTATAAGCCGTA",8,51.75,6.63,-4.21,0.39,1.5,1.14,0.02,">1 nonsynonymous","F8Y I28A V77S S139R S184Y",5
"lib2","SARS-CoV-2","AATGCTATAATATATT",15,131.15,6.1,-4.74,0.68,1.5,1.16,0.01,">1 nonsynonymous","A14R C31H A89Y",3
"lib2","SARS-CoV-2","AATGCTATAATTATGT",1,12.74,10.77,-0.07,0.11,2.76,1.25,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATGCTATCCGTTGAA",15,159.67,9.17,-1.66,0.08,2.88,1.08,0,">1 nonsynonymous","L5C F156C",2
"lib2","SARS-CoV-2","AATGCTATCGGTCAAG",9,111.73,8.52,-2.32,0.07,2.4,1.04,0,">1 nonsynonymous","V77M G117R N130A",3
"lib2","SARS-CoV-2","AATGCTATCGTCTTCA",9,111.64,6.02,-4.81,0.95,1.5,1.18,0.02,">1 nonsynonymous","Y35A I72V T85Y I138S G152L",5
"lib2","SARS-CoV-2","AATGCTCAAGGCTGGT",5,54.92,9.06,-1.78,0.06,2.83,1.15,0,">1 nonsynonymous","V32K L122Q I142D",3
"lib2","SARS-CoV-2","AATGCTCAATGCATTG",2,0.54,NA,NA,NA,NA,NA,NA,"stop","C61V Q84* Y91T",3
"lib2","SARS-CoV-2","AATGCTCAATTACAAA",10,353.42,10.82,-0.02,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCTCAATTATAAA",6,70.99,10.86,0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGCTCATATAAATA",2,28.94,9.37,-1.46,0.14,2.41,1.11,0.01,">1 nonsynonymous","R27G I104V G116S",3
"lib2","SARS-CoV-2","AATGCTCCAACGTTCA",4,80.8,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56W N118L I142D",3
"lib2","SARS-CoV-2","AATGCTCGCACATAAT",1,0.96,NA,NA,NA,NA,NA,NA,"stop","G83L D90S W106S R127*",4
"lib2","SARS-CoV-2","AATGCTCGCCTGGCGA",8,92.7,10.87,0.03,0.04,2.95,1.08,0,">1 nonsynonymous","K56A L187S",2
"lib2","SARS-CoV-2","AATGCTCTAAAATAGT",13,30.58,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D97R V103L I138L G152C",4
"lib2","SARS-CoV-2","AATGCTCTACATTTTT",9,0.66,NA,NA,NA,NA,NA,NA,"stop","N1W Y35C D59E F70T T85F N120* V173Y",7
"lib2","SARS-CoV-2","AATGCTGAAAAGGCGG",4,16.6,6,-4.84,2,1.5,1.13,0.04,"1 nonsynonymous","I80K",1
"lib2","SARS-CoV-2","AATGCTGAAAGAAGCA",1,8.5,6.81,-4.02,0.48,1.5,1.01,0.04,"1 nonsynonymous","Y159T",1
"lib2","SARS-CoV-2","AATGCTGAGGCCTAAT",2,0.36,NA,NA,NA,NA,NA,NA,"stop","L95C E154*",2
"lib2","SARS-CoV-2","AATGCTGGTCAATACC",6,37.26,9.95,-0.88,0.09,2.56,1.04,0,">1 nonsynonymous","A22I S43G T140N",3
"lib2","SARS-CoV-2","AATGCTGTCGCACAGG",2,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I I72A V180S",3
"lib2","SARS-CoV-2","AATGCTTACATTAGCA",2,13.13,10.75,-0.09,0.11,2.96,1.05,0,">1 nonsynonymous","L5P N171I",2
"lib2","SARS-CoV-2","AATGCTTTAAATGTGT",18,388.76,6,-4.84,1.94,1.5,1.19,0.01,">1 nonsynonymous","L38T S45T S129F P149R Q176M",5
"lib2","SARS-CoV-2","AATGCTTTTATCAGTA",9,57.22,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I88P A190T",2
"lib2","SARS-CoV-2","AATGGAAATGACCTAG",5,85.32,6.17,-4.67,0.28,1.5,1.09,0,">1 nonsynonymous","D97E C150I N157L",3
"lib2","SARS-CoV-2","AATGGAACAAAACAAA",5,75.36,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","G101M",1
"lib2","SARS-CoV-2","AATGGAAGCTTACTAA",1,16.98,7.5,-3.33,0.23,1.5,1.04,0.02,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","AATGGAATACCATAGG",4,20.92,9.27,-1.57,0.22,1.74,1.11,0.03,">1 nonsynonymous","L57S F62T S139A P197S",4
"lib2","SARS-CoV-2","AATGGAATCACAACCA",1,23.94,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N4T E10G R27T S36L F99C Y121W",6
"lib2","SARS-CoV-2","AATGGAATGTTGAAGT",2,13.82,9.91,-0.93,0.14,2.72,1.09,0.01,">1 nonsynonymous","V11A K87Y K198I",3
"lib2","SARS-CoV-2","AATGGACAATAAAGTC",3,24.48,9.28,-1.56,0.14,1.85,1.12,0.01,">1 nonsynonymous","A14F T100Q",2
"lib2","SARS-CoV-2","AATGGACACAAGACCT",2,57.54,10.81,-0.03,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGGACACTCGAGAT",13,6.39,10.26,-0.58,0.11,2.99,1.05,0,">1 nonsynonymous","P7L F99R",2
"lib2","SARS-CoV-2","AATGGACAGTGCCGTA",27,506.4,10.8,-0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGGACCTATCCCTA",6,28.56,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F47M P82E Y93E G101L Y143V",5
"lib2","SARS-CoV-2","AATGGACTTGATGTTA",6,0.32,NA,NA,NA,NA,NA,NA,"stop","T15* F44V L95W Y123S E141D T148L",6
"lib2","SARS-CoV-2","AATGGAGAAAACGTGA",4,67.13,9.89,-0.94,0.09,2.36,1.07,0,">1 nonsynonymous","A18W T63M",2
"lib2","SARS-CoV-2","AATGGAGAATGTCTAA",2,129.54,10.69,-0.15,0.02,2.93,1.08,0,">1 nonsynonymous","K56V K128T",2
"lib2","SARS-CoV-2","AATGGAGACTCTAGAA",1,103.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A81S T148S G172R",3
"lib2","SARS-CoV-2","AATGGAGTAAATACAA",10,192.68,10.01,-0.83,0.05,2.93,1.05,0,">1 nonsynonymous","I28M T85M L122W G155E",4
"lib2","SARS-CoV-2","AATGGAGTCTATATAG",2,65.83,9.61,-1.22,0.04,2.89,1.07,0,">1 nonsynonymous","F8I R16D L125S F134A",4
"lib2","SARS-CoV-2","AATGGAGTTGTGGCAA",3,29.28,10.34,-0.5,0.12,1.96,1,0.01,">1 nonsynonymous","Y66D V71L",2
"lib2","SARS-CoV-2","AATGGATACTTAATAT",9,172.22,10.84,0.01,0.03,3,1.02,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","AATGGATAGATCAGCC",3,7.8,6.06,-4.78,1.62,1.5,1.06,0.02,">1 nonsynonymous","D34V Y121C S164M",3
"lib2","SARS-CoV-2","AATGGATAGTTGTGGC",3,18.43,10.52,-0.32,0.22,2.51,1.09,0.02,">1 nonsynonymous","D90V D98K",2
"lib2","SARS-CoV-2","AATGGATATTTCCGAG",1,0.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","AATGGATATTTCTAAA",4,40.34,7.73,-3.1,0.22,1.5,1.24,0.02,">1 nonsynonymous","N1K W23L V37L",3
"lib2","SARS-CoV-2","AATGGATTAAAACATA",8,51.28,9.35,-1.49,0.09,1.79,1.03,0,">1 nonsynonymous","A18I I104V",2
"lib2","SARS-CoV-2","AATGGATTAAAATATG",8,87.09,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N107I R124V",2
"lib2","SARS-CoV-2","AATGGATTCGATTTAT",1,5.91,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","D34S C150N",2
"lib2","SARS-CoV-2","AATGGATTGCAACATA",8,51.17,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12Y I28K K48M F126G Q168T",5
"lib2","SARS-CoV-2","AATGGATTGCAAGGTG",5,169.39,11.14,0.31,0.05,2.91,1.09,0,"1 nonsynonymous","N171Y",1
"lib2","SARS-CoV-2","AATGGCAAAGAGATGT",3,0.68,NA,NA,NA,NA,NA,NA,"stop","N110G K132*",2
"lib2","SARS-CoV-2","AATGGCAAATAGATAA",6,61.76,8.74,-2.09,0.16,1.5,1.13,0.01,">1 nonsynonymous","P96F T201Q",2
"lib2","SARS-CoV-2","AATGGCAAATCCGTAA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","N4R Y123S P149*",3
"lib2","SARS-CoV-2","AATGGCAACTTTCGCG",1,26.64,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A22S V77E V103L V153W",4
"lib2","SARS-CoV-2","AATGGCACGACTGGTC",4,32.07,10.6,-0.23,0.05,3,1.01,0,"1 nonsynonymous","K94A",1
"lib2","SARS-CoV-2","AATGGCACTCGAGCCT",13,75.42,6,-4.84,1.26,1.5,1.17,0.01,">1 nonsynonymous","F44I L95A S129R E141I V173M",5
"lib2","SARS-CoV-2","AATGGCATCAAGAGAA",1,35.2,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","C61R G83I I88Y S139G A192E",5
"lib2","SARS-CoV-2","AATGGCATGTAAGCAG",6,143.23,10.58,-0.25,0.04,2.94,1.05,0,">1 nonsynonymous","F62Q H189S",2
"lib2","SARS-CoV-2","AATGGCCACTATAGTA",6,107.22,10.15,-0.68,0.06,2.8,1.07,0,">1 nonsynonymous","T3Y T46D T148R T201S",4
"lib2","SARS-CoV-2","AATGGCCATGTATAAG",4,17.76,7.27,-3.56,0.26,1.52,1.14,0.02,">1 nonsynonymous","K94I E154L P191N",3
"lib2","SARS-CoV-2","AATGGCCCAGATTATA",1,6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59H T170M S200F",3
"lib2","SARS-CoV-2","AATGGCCCTACACGCG",13,221.43,10.8,-0.04,0.04,2.88,1.1,0,">1 nonsynonymous","K48N P197A",2
"lib2","SARS-CoV-2","AATGGCCTCAACAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","C31E L38H L60* G83Y V153F",5
"lib2","SARS-CoV-2","AATGGCGAGTAAGTTT",2,33.18,8.47,-2.37,0.15,3,1.06,0.01,">1 nonsynonymous","I2G K87N G117D",3
"lib2","SARS-CoV-2","AATGGCGCATCAACGC",4,35.06,6.2,-4.64,0.37,3,1.23,0.01,">1 nonsynonymous","F62K G83S A89M D98Y A145T",5
"lib2","SARS-CoV-2","AATGGCTAACCCTTGA",1,19.49,10.39,-0.44,0.07,2.9,1,0,">1 nonsynonymous","N13F C61K V173D",3
"lib2","SARS-CoV-2","AATGGCTACCAAAAAG",3,0.96,NA,NA,NA,NA,NA,NA,"stop","A42K T100D N120* F160I",4
"lib2","SARS-CoV-2","AATGGCTATACGAAGA",1,12.48,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N4E F70T N110C N130K",4
"lib2","SARS-CoV-2","AATGGCTATTTGCGGA",3,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A33R D34N L60Q T85E P96C",6
"lib2","SARS-CoV-2","AATGGCTCACGTTAAG",13,129.07,9.91,-0.92,0.08,2.12,1,0,">1 nonsynonymous","N40I T63Q D97A",3
"lib2","SARS-CoV-2","AATGGCTTTTTATCAA",10,106.12,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","C6G N107L",2
"lib2","SARS-CoV-2","AATGGGAAACTACCCA",7,85.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A42H F167T Q176A T201W",4
"lib2","SARS-CoV-2","AATGGGACGAATGTAT",7,5.51,6.08,-4.75,0.69,3,1.12,0,">1 nonsynonymous","T3M N13I G83C C158P",4
"lib2","SARS-CoV-2","AATGGGACGGCACAAG",2,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168G",1
"lib2","SARS-CoV-2","AATGGGAGAATAGACC",6,48.04,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A105L S113C",2
"lib2","SARS-CoV-2","AATGGGAGACTACTCA",16,235.92,9.55,-1.29,0.05,1.95,1.07,0,"1 nonsynonymous","V11K",1
"lib2","SARS-CoV-2","AATGGGCAAAAGGCTA",4,59.69,7.82,-3.01,0.13,1.5,1.08,0.01,">1 nonsynonymous","W23Q T46F",2
"lib2","SARS-CoV-2","AATGGGCAGCTCCGAT",8,27.88,10.84,0.01,0.08,2.9,1.06,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","AATGGGCTAAATCGCA",5,37.85,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14T N107S G117R F134A",4
"lib2","SARS-CoV-2","AATGGGCTAGGCGGTG",7,36.69,6,-4.84,2,3,1.22,0,">1 nonsynonymous","P133T S139M A145T T170I",4
"lib2","SARS-CoV-2","AATGGGCTCGGCCGTT",6,14.23,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","I104E F134P N157D",3
"lib2","SARS-CoV-2","AATGGGGCAAAAAGAG",14,13.75,NA,NA,NA,NA,NA,NA,"stop","K48M T85* C158L",3
"lib2","SARS-CoV-2","AATGGGGCCATATTAG",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D P96L D137T",3
"lib2","SARS-CoV-2","AATGGGGCCGGTTTCC",8,8.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103E",1
"lib2","SARS-CoV-2","AATGGGTAAGCAAGAT",1,7.31,10.43,-0.41,0.08,2.96,1.07,0,">1 nonsynonymous","F17Y S200Y",2
"lib2","SARS-CoV-2","AATGGGTATCCTAAGG",4,19.79,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","G51S T85D E141K C150A",4
"lib2","SARS-CoV-2","AATGGGTATGAGATCC",10,207.51,10.26,-0.58,0.03,2.85,1.04,0,">1 nonsynonymous","N58R N130V P149W",3
"lib2","SARS-CoV-2","AATGGGTTCCCATAAT",1,163.39,10.66,-0.17,0.04,2.88,1.1,0,">1 nonsynonymous","A33L T201M",2
"lib2","SARS-CoV-2","AATGGGTTCTCGAAAC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","P54R N92L G116* G146T",4
"lib2","SARS-CoV-2","AATGGTAAAATTCAAT",4,23.3,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","A81P",1
"lib2","SARS-CoV-2","AATGGTAAAGCGACAA",1,20.28,9.8,-1.04,0.15,2.04,1.06,0.01,">1 nonsynonymous","N64T C102L S129R P149V",4
"lib2","SARS-CoV-2","AATGGTAACTGAAAAT",12,108.06,6.27,-4.57,0.4,1.5,1.12,0.01,">1 nonsynonymous","D59S R124S T201S",3
"lib2","SARS-CoV-2","AATGGTAATAGCTCCC",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W G51M Y66C I88V I104H",5
"lib2","SARS-CoV-2","AATGGTACACAATTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","K128* T170C",2
"lib2","SARS-CoV-2","AATGGTACCCAGTCTC",2,0.91,NA,NA,NA,NA,NA,NA,"stop","A33R V115*",2
"lib2","SARS-CoV-2","AATGGTAGAGGTAAAT",4,67.45,10.06,-0.78,0.07,2.75,1.11,0,">1 nonsynonymous","T63G D97Q N120W",3
"lib2","SARS-CoV-2","AATGGTATAGATAAAT",3,35.77,10.43,-0.41,0.07,2.93,1.09,0.01,">1 nonsynonymous","C61D E154N",2
"lib2","SARS-CoV-2","AATGGTATATATAACC",10,33.6,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Y50K N58Y R124H D137Y G196R",5
"lib2","SARS-CoV-2","AATGGTATCAACCTAG",4,52.94,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N4H F17I G51C K87V Y119P L125S V173N",7
"lib2","SARS-CoV-2","AATGGTATGAAAGTCA",3,42.92,8.84,-2,0.25,1.5,1.04,0.02,">1 nonsynonymous","W23F G83H F134I",3
"lib2","SARS-CoV-2","AATGGTATTACACTAT",4,57.42,7.76,-3.07,0.21,1.61,1.24,0.01,">1 nonsynonymous","A18T V37N Y165S",3
"lib2","SARS-CoV-2","AATGGTCCATCCACAC",24,510.5,10.58,-0.26,0.03,2.91,1.06,0,">1 nonsynonymous","R16L K56R V115R S147I",4
"lib2","SARS-CoV-2","AATGGTCGCTCAAGGC",7,164.78,10.48,-0.36,0.03,2.86,1.07,0,">1 nonsynonymous","F44Q T201R",2
"lib2","SARS-CoV-2","AATGGTCGCTTAGCCT",9,15.12,7.11,-3.72,0.45,1.5,1.02,0.06,">1 nonsynonymous","C49A N58M C61L D112L P133T",5
"lib2","SARS-CoV-2","AATGGTCGTTCGCCTA",6,46.32,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8R N157I",2
"lib2","SARS-CoV-2","AATGGTCTAGGGCAGG",13,63.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1T V20M K114S S129V T201R",5
"lib2","SARS-CoV-2","AATGGTCTCGGTTAAG",8,143.2,10.73,-0.1,0.03,2.95,1.07,0,">1 nonsynonymous","Y39N L122E",2
"lib2","SARS-CoV-2","AATGGTGATTCCACCC",3,6.87,10.76,-0.08,0.08,3,1,0,"1 nonsynonymous","V32H",1
"lib2","SARS-CoV-2","AATGGTGCGCACTGTG",1,13.69,10.78,-0.05,0.05,2.81,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGGTGCGGGAGGAC",4,9.23,8.53,-2.31,0.31,1.5,1.1,0.04,">1 nonsynonymous","S29G G83V P191F",3
"lib2","SARS-CoV-2","AATGGTTACAAGGTGA",7,3.68,NA,NA,NA,NA,NA,NA,"stop","G9F C49Y L57K I80R T201*",5
"lib2","SARS-CoV-2","AATGGTTATCTTACTT",3,46.36,10.87,0.03,0.07,2.87,1.15,0,"1 nonsynonymous","H189E",1
"lib2","SARS-CoV-2","AATGGTTCCGCAAAAA",14,75.01,8.33,-2.5,0.2,1.5,1.02,0.02,">1 nonsynonymous","W106G G116T",2
"lib2","SARS-CoV-2","AATGGTTCGTTAGTCA",8,42.55,9.54,-1.29,0.11,1.97,1.07,0,">1 nonsynonymous","F99I T140S",2
"lib2","SARS-CoV-2","AATGGTTGACATCACA",8,42.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6N R25F D68N N107I Q168I",5
"lib2","SARS-CoV-2","AATGGTTGAGTTCTAC",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","AATGGTTTATTATAAT",3,29.68,10.74,-0.1,0.06,3,1.02,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","AATGTAAAAACACACA",2,32.1,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L38M D59A A81L T85I D137A K198F",6
"lib2","SARS-CoV-2","AATGTAAAAGACTTCG",4,48.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9K Q84F D90L N107Y",4
"lib2","SARS-CoV-2","AATGTAAAATTATTCC",4,40.1,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","G101C Q144W",2
"lib2","SARS-CoV-2","AATGTAAACAAGAATG",5,52.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49Q K94M L122K P169H P191N",5
"lib2","SARS-CoV-2","AATGTAAAGCACTTAG",7,73.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49V Y91S G155H",3
"lib2","SARS-CoV-2","AATGTAAATGTTTGAA",1,11.78,8.91,-1.93,0.25,1.57,1.05,0.03,">1 nonsynonymous","V77F G83R K128S",3
"lib2","SARS-CoV-2","AATGTAACCTCGGCGG",2,25.14,6,-4.84,2,3,1.17,0,">1 nonsynonymous","E10V R25V L57G F99V",4
"lib2","SARS-CoV-2","AATGTAACGATGCCGA",5,46.59,8.91,-1.92,0.12,1.5,1.09,0.01,">1 nonsynonymous","R16H S36T Y50Q",3
"lib2","SARS-CoV-2","AATGTAACGTACCCTC",8,125.93,9.3,-1.53,0.05,2.87,1.13,0,">1 nonsynonymous","C61T L125H",2
"lib2","SARS-CoV-2","AATGTAACTAAACTTG",2,63.68,10.39,-0.44,0.05,2.88,1.06,0,">1 nonsynonymous","A18M R27L",2
"lib2","SARS-CoV-2","AATGTAACTATAAAGC",1,5.95,10.96,0.12,0.14,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTAAGCACGAAGT",1,35.93,10.78,-0.05,0.09,2.85,1.11,0,">1 nonsynonymous","V32K T201C",2
"lib2","SARS-CoV-2","AATGTAAGTGTAACAA",4,47.45,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A14W V52S A89L G152K L183V K198M",6
"lib2","SARS-CoV-2","AATGTAATACTATTGA",3,93.49,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61K I138P G155V F167L",4
"lib2","SARS-CoV-2","AATGTAATATGCCCCC",10,8.23,NA,NA,NA,NA,NA,NA,"stop","L38V Y50D W106K E141*",4
"lib2","SARS-CoV-2","AATGTAATCGGTGAGG",2,21.26,8.05,-2.78,0.4,1.5,1.02,0.07,">1 nonsynonymous","N4G F17L P96N F156S",4
"lib2","SARS-CoV-2","AATGTAATCTAATGAG",3,24.47,9.69,-1.14,0.06,2.82,1.01,0,">1 nonsynonymous","K56D V153I T170R",3
"lib2","SARS-CoV-2","AATGTAATTTGCAAAG",8,141.74,8.65,-2.18,0.07,2.8,1.1,0,"1 nonsynonymous","S113M",1
"lib2","SARS-CoV-2","AATGTACAAATAGATC",6,21.69,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G86S Y91L G146M",3
"lib2","SARS-CoV-2","AATGTACAATACACCA",2,49.73,9.73,-1.1,0.07,2.67,1.05,0,">1 nonsynonymous","A42L N107K",2
"lib2","SARS-CoV-2","AATGTACAATTACTGA",1,8.05,9.52,-1.31,0.15,1.96,1.05,0.01,">1 nonsynonymous","A33V N107P E135M",3
"lib2","SARS-CoV-2","AATGTACATCACCGCA",1,19.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99N G146L",2
"lib2","SARS-CoV-2","AATGTACATGTGAAAG",3,37.22,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y35L L95S D112V",3
"lib2","SARS-CoV-2","AATGTACCAAAAAATT",4,1.48,NA,NA,NA,NA,NA,NA,"stop","A42M N58K K87* P96V R179P",5
"lib2","SARS-CoV-2","AATGTACCAGCGAATT",1,19.74,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10T D68A L95G N107S",4
"lib2","SARS-CoV-2","AATGTACCGAATTCAA",1,6.58,6,-4.84,2,1.5,1.02,0.01,">1 nonsynonymous","C49Q K56E N130R F167A",4
"lib2","SARS-CoV-2","AATGTACCTCCCCAGT",15,81.92,7.81,-3.02,0.48,1.5,1,0.08,">1 nonsynonymous","P7L A89H S113G Y123A N130A",5
"lib2","SARS-CoV-2","AATGTACTCCCAAAGC",4,2.49,NA,NA,NA,NA,NA,NA,"stop","E10F S36L A42E S129G V173*",5
"lib2","SARS-CoV-2","AATGTACTCGCCAAAT",6,49.96,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I72G Q84T E135G F156P",4
"lib2","SARS-CoV-2","AATGTACTGAACAGTG",9,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S G86Y K132S T148V S200C",5
"lib2","SARS-CoV-2","AATGTAGACAATATCG",2,37.05,10.58,-0.25,0.05,2.94,1.03,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","AATGTAGCACATCTAA",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G V77K G86C W106A G116Y G152N",6
"lib2","SARS-CoV-2","AATGTAGCCTAAAAAC",5,14.41,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y35Q A42E F62I I104N S139C",5
"lib2","SARS-CoV-2","AATGTATACGAGACCA",10,65.17,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P82A V103T P149L V173M K199E",5
"lib2","SARS-CoV-2","AATGTATCTTGTTTAA",5,18.89,11,0.16,0.07,3,1.01,0,">1 nonsynonymous","R16D Y35L N58T",3
"lib2","SARS-CoV-2","AATGTATGATATGACA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","S19K K94* G146H",3
"lib2","SARS-CoV-2","AATGTATGATATTAAT",2,12.4,9.12,-1.72,0.17,1.79,1.05,0.01,">1 nonsynonymous","C61T P133L",2
"lib2","SARS-CoV-2","AATGTATGATTTGACG",4,96.1,10.72,-0.12,0.04,2.92,1.07,0,">1 nonsynonymous","I2L A33L K198M",3
"lib2","SARS-CoV-2","AATGTATTAACATATT",6,25,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","S19L I72K V103G G166Y",4
"lib2","SARS-CoV-2","AATGTATTAGTCCAAA",14,190.77,10.69,-0.14,0.03,2.95,1.06,0,">1 nonsynonymous","S45D T85H A89S T140K",4
"lib2","SARS-CoV-2","AATGTATTCCGAATAT",2,7.18,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","V153S",1
"lib2","SARS-CoV-2","AATGTATTTGCCGTAT",5,36.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9I R25F I80S N107S",4
"lib2","SARS-CoV-2","AATGTCAAAACGAAAT",3,36.91,6,-4.84,2,3,1.07,0,"1 nonsynonymous","N92K",1
"lib2","SARS-CoV-2","AATGTCAAATAATGAA",2,1.22,NA,NA,NA,NA,NA,NA,"stop","S36Q Y50Q L95* F126L",4
"lib2","SARS-CoV-2","AATGTCAACCAGCGGG",3,17.43,8.57,-2.27,0.16,1.6,1.01,0.01,">1 nonsynonymous","C6P S53K F62Y G83E",4
"lib2","SARS-CoV-2","AATGTCACAAAAATAG",4,31.58,9.74,-1.1,0.11,2.24,1.05,0.01,">1 nonsynonymous","D34Y L60M N120Y",3
"lib2","SARS-CoV-2","AATGTCATGCGTACCA",1,6.98,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N64D N107Y T201L",3
"lib2","SARS-CoV-2","AATGTCATTGAGCTAC",8,5.43,NA,NA,NA,NA,NA,NA,"stop","V37* F62T N157D F185C",4
"lib2","SARS-CoV-2","AATGTCCAAATAAGTA",4,11.07,6.65,-4.18,0.59,1.5,1.08,0.06,">1 nonsynonymous","G51S N64L F99M",3
"lib2","SARS-CoV-2","AATGTCCAACCCTCAC",4,14.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T85S E135Y R179G S184L T201D",5
"lib2","SARS-CoV-2","AATGTCCAGTTTGTTC",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H G51T Y119L N171Y",4
"lib2","SARS-CoV-2","AATGTCCATACCCAGC",1,29.96,10.2,-0.63,0.06,2.76,1.02,0,">1 nonsynonymous","G9T C49W",2
"lib2","SARS-CoV-2","AATGTCCGAGTGTTTT",7,87.7,9.39,-1.44,0.09,2.08,1.03,0,">1 nonsynonymous","V11N K114E",2
"lib2","SARS-CoV-2","AATGTCCTAATCGGTT",6,37.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R73L K87L K128R F134R A192H",5
"lib2","SARS-CoV-2","AATGTCCTACCAGCTT",8,4.78,NA,NA,NA,NA,NA,NA,"stop","D90N V115* Q176M",3
"lib2","SARS-CoV-2","AATGTCGAAATACTGT",3,104.68,10.69,-0.15,0.06,2.87,1.08,0,">1 nonsynonymous","S43R K87R",2
"lib2","SARS-CoV-2","AATGTCGCAAGCTTTA",7,2.87,NA,NA,NA,NA,NA,NA,"stop","G116* V180M",2
"lib2","SARS-CoV-2","AATGTCGCCTCTAATC",5,31.47,10.82,-0.02,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTCTAACCTGACA",15,186.73,8.39,-2.44,0.07,1.81,1.11,0,">1 nonsynonymous","F156M Y178Q P191I C195L",4
"lib2","SARS-CoV-2","AATGTCTATTAATAGT",1,48.54,10.73,-0.1,0.05,2.95,1.07,0,">1 nonsynonymous","A42T V77L T85R",3
"lib2","SARS-CoV-2","AATGTCTCAAAGGTGG",8,69.57,10.02,-0.81,0.08,2.72,1.11,0,">1 nonsynonymous","D90R F156K S200L",3
"lib2","SARS-CoV-2","AATGTCTTAAGGCCAG",10,167.36,10.34,-0.5,0.03,2.94,1.06,0,">1 nonsynonymous","F62V K132L G174R",3
"lib2","SARS-CoV-2","AATGTCTTATATAAGT",3,0.42,NA,NA,NA,NA,NA,NA,"stop","A18* Y66I I104L V115L S129D",5
"lib2","SARS-CoV-2","AATGTGAACTATCAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I2A R16* G101Y",3
"lib2","SARS-CoV-2","AATGTGAACTTCTGGT",6,16.68,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","G101Q",1
"lib2","SARS-CoV-2","AATGTGAATCAGTATA",6,29.59,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12A D59R F99V",3
"lib2","SARS-CoV-2","AATGTGAATTACCTGC",10,74.84,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","T15L F47C T55L R136T N157F",5
"lib2","SARS-CoV-2","AATGTGACACTCAACA",11,145.6,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","D97L Y175G V180R C195I",4
"lib2","SARS-CoV-2","AATGTGACACTCCGGG",14,110.18,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I28K N157W",2
"lib2","SARS-CoV-2","AATGTGACTATACTCT",3,14.07,8.44,-2.4,0.17,1.91,1.12,0.01,">1 nonsynonymous","N13F K94H P149Q G174Q",4
"lib2","SARS-CoV-2","AATGTGAGTATTGAAA",6,0.22,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib2","SARS-CoV-2","AATGTGAGTGCTTACT",9,38.71,6.04,-4.79,0.74,1.93,1.17,0.01,">1 nonsynonymous","P82F S184K",2
"lib2","SARS-CoV-2","AATGTGAGTTAATGAA",2,27.57,8.88,-1.95,0.21,1.58,1.11,0.02,">1 nonsynonymous","T85I N107T",2
"lib2","SARS-CoV-2","AATGTGATTGGACTCA",1,13.27,10.73,-0.11,0.08,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTGCACTTCAATT",5,76.42,9.13,-1.7,0.13,2.59,1.11,0.01,">1 nonsynonymous","G51H N64L L125C",3
"lib2","SARS-CoV-2","AATGTGCATAAAATCT",3,46.25,6.72,-4.11,0.29,1.5,1.11,0.01,">1 nonsynonymous","E10R S29I N107M",3
"lib2","SARS-CoV-2","AATGTGCCCACCGGTA",6,73.65,10.45,-0.39,0.04,2.94,1.04,0,">1 nonsynonymous","V11I F126M",2
"lib2","SARS-CoV-2","AATGTGCCCCACCCGT",2,11.21,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6V F17A V103G K128V D137V",5
"lib2","SARS-CoV-2","AATGTGCGGGATGTAT",2,3.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94D",1
"lib2","SARS-CoV-2","AATGTGCGGGGGAATC",3,0,NA,NA,NA,NA,NA,NA,"stop","V37K F99* L122G V173T",4
"lib2","SARS-CoV-2","AATGTGGCTAGAGCCT",4,2.09,NA,NA,NA,NA,NA,NA,"stop","I28R D98*",2
"lib2","SARS-CoV-2","AATGTGTAAGCTAACT",5,1.13,NA,NA,NA,NA,NA,NA,"stop","F17T D90* G172W V180*",4
"lib2","SARS-CoV-2","AATGTGTTACCCGACA",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G Y35D F99T V173A",4
"lib2","SARS-CoV-2","AATGTGTTCCGATATA",5,42.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D34A C49A G83N",3
"lib2","SARS-CoV-2","AATGTTAACTAAAATT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","K87Y Y159*",2
"lib2","SARS-CoV-2","AATGTTAACTAACAAG",1,30.71,8.32,-2.52,0.13,2.69,1.06,0.01,">1 nonsynonymous","G146N G174F",2
"lib2","SARS-CoV-2","AATGTTAAGAAAGAGA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","S43C A89R I104* V173C",4
"lib2","SARS-CoV-2","AATGTTAAGTGTCACA",23,206.62,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","Y39P V103K",2
"lib2","SARS-CoV-2","AATGTTACTATGCCAC",1,41.77,10.02,-0.81,0.06,2.82,1.12,0,">1 nonsynonymous","A42S A145T Q168A",3
"lib2","SARS-CoV-2","AATGTTACTATGTATT",3,86.05,10.24,-0.59,0.06,2.78,1.09,0,"1 nonsynonymous","F167Y",1
"lib2","SARS-CoV-2","AATGTTAGCTATCATT",1,21.25,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K48T Y93S S129D",3
"lib2","SARS-CoV-2","AATGTTAGTGGATTTT",1,31.84,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N64V V77Y G152V Y159S",4
"lib2","SARS-CoV-2","AATGTTATAGACAAAA",11,152.13,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V32G K48E P54I D112T",4
"lib2","SARS-CoV-2","AATGTTATCATTTGTG",1,16.49,8.88,-1.96,0.17,1.88,1.14,0.01,">1 nonsynonymous","A105G N120Y S184R",3
"lib2","SARS-CoV-2","AATGTTATGGTTTATG",2,40.42,10.8,-0.04,0.07,2.84,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTTATTAACTTTG",4,3.94,NA,NA,NA,NA,NA,NA,"stop","D59S D98C E135*",3
"lib2","SARS-CoV-2","AATGTTATTTAGAGAG",2,19.3,6.88,-3.96,0.35,1.5,1.09,0.03,">1 nonsynonymous","L5S Y93L F160L",3
"lib2","SARS-CoV-2","AATGTTCACGGTATGA",3,8.33,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","S45G Y66I D137L T148V V173F",5
"lib2","SARS-CoV-2","AATGTTCATGAAGAAC",9,197.04,10.83,-0.01,0.04,2.95,1.06,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AATGTTCCACCTCCAT",13,91.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N30M V52G N107G",3
"lib2","SARS-CoV-2","AATGTTCGAATAGTAG",1,8.48,9.02,-1.82,0.2,2.99,1.06,0.01,">1 nonsynonymous","Q168L T201N",2
"lib2","SARS-CoV-2","AATGTTCGCAAATAGT",6,40.11,6.29,-4.55,0.52,1.5,1.12,0.01,">1 nonsynonymous","K48Q D90C D97C P169F",4
"lib2","SARS-CoV-2","AATGTTCGTTATAGGG",6,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M G86P",2
"lib2","SARS-CoV-2","AATGTTCTTCTCAATA",10,112.33,10.69,-0.15,0.05,2.86,1.04,0,"1 nonsynonymous","A81E",1
"lib2","SARS-CoV-2","AATGTTGACAGTGAAG",4,31.63,8.9,-1.94,0.11,2.19,1.04,0,">1 nonsynonymous","N4V A18S N118I",3
"lib2","SARS-CoV-2","AATGTTGACCCACAAT",1,5.68,10.37,-0.46,0.11,3,1.04,0,">1 nonsynonymous","C6Y K87T L122N",3
"lib2","SARS-CoV-2","AATGTTGCTCTCGCAA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","C102H R127*",2
"lib2","SARS-CoV-2","AATGTTGGCCCGGCGT",5,40.38,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T55V C61T D68L D90G Y119Q P161L",6
"lib2","SARS-CoV-2","AATGTTGTACGAGGTG",9,74.46,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10V R25G S41P C49S Y123C P149C",6
"lib2","SARS-CoV-2","AATGTTGTGATTTTTT",2,38.22,10.65,-0.18,0.04,3,1.03,0,">1 nonsynonymous","L57I N151K",2
"lib2","SARS-CoV-2","AATGTTTAAGAATGAA",6,100.3,10.91,0.07,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTTTAATAAAATA",15,7.43,NA,NA,NA,NA,NA,NA,"stop","N13S V37*",2
"lib2","SARS-CoV-2","AATGTTTACCCTCTCA",6,160.86,8.61,-2.23,0.08,2.62,1.07,0,">1 nonsynonymous","Y21L V37F S43Q Q168L",4
"lib2","SARS-CoV-2","AATGTTTATATATCGA",8,173.55,9.8,-1.04,0.05,1.97,1.08,0,"1 nonsynonymous","C49I",1
"lib2","SARS-CoV-2","AATGTTTATGGAAATA",9,110.51,10.82,-0.02,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATGTTTCCCAACATG",13,268.27,8.87,-1.97,0.08,2.69,1.09,0,">1 nonsynonymous","A14H Y159F",2
"lib2","SARS-CoV-2","AATGTTTCCTTTTAGT",3,25.93,6,-4.84,0.51,3,1.1,0,">1 nonsynonymous","I28S P96S T170M",3
"lib2","SARS-CoV-2","AATGTTTCTATATCAA",1,7.14,7.54,-3.3,0.4,1.88,1.2,0.03,">1 nonsynonymous","A14D E141L G152A",3
"lib2","SARS-CoV-2","AATGTTTCTGCGTGGT",9,176.73,9.82,-1.02,0.03,2.93,1.05,0,"1 nonsynonymous","P169D",1
"lib2","SARS-CoV-2","AATGTTTGAAGTCGAG",4,18.43,10.06,-0.78,0.1,1.88,1.04,0.01,">1 nonsynonymous","P7L T55R N64R P191L",4
"lib2","SARS-CoV-2","AATGTTTGCATAACCG",6,132.15,10.76,-0.08,0.04,2.93,1.08,0,"1 nonsynonymous","N151E",1
"lib2","SARS-CoV-2","AATGTTTGTAATCTAA",5,67.26,9.04,-1.79,0.06,1.85,1.07,0,">1 nonsynonymous","I80M G155T",2
"lib2","SARS-CoV-2","AATTAAAAAAAGTATA",7,0,NA,NA,NA,NA,NA,NA,"stop","F44W D68* N118S G146Y",4
"lib2","SARS-CoV-2","AATTAAAAAATTCTAC",4,27.97,8.93,-1.91,0.06,3,1.05,0,">1 nonsynonymous","F62S Y119S N151W",3
"lib2","SARS-CoV-2","AATTAAAAACAGTGTG",1,39.61,10.11,-0.73,0.11,2.58,1.01,0,">1 nonsynonymous","T55S A89I",2
"lib2","SARS-CoV-2","AATTAAAAACCATCCA",3,20.89,9.47,-1.37,0.12,1.82,1,0.01,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","AATTAAAAACGAAGAT",2,39.83,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P7C G117R P149F E154H",4
"lib2","SARS-CoV-2","AATTAAAAATAAGGGG",5,23.27,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K94C W106V L111R N120L E135L",5
"lib2","SARS-CoV-2","AATTAAAAATAGACTG",1,99.23,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44L G174E P177L",3
"lib2","SARS-CoV-2","AATTAAAAATCGTATC",2,14.03,6.34,-4.49,1.16,1.5,1.25,0.05,">1 nonsynonymous","G83S N107C Y119L",3
"lib2","SARS-CoV-2","AATTAAAAATTGAAAG",6,179.81,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25L S36G N157W",3
"lib2","SARS-CoV-2","AATTAAAACAATTGCG",4,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R N110L C150F H189T",4
"lib2","SARS-CoV-2","AATTAAAACACCTTGA",7,84.19,10.85,0.02,0.05,2.87,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTAAAACTCCATAT",1,12.19,9.63,-1.21,0.08,2.97,1.1,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","AATTAAAAGATAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* L122M",2
"lib2","SARS-CoV-2","AATTAAAAGCTACGGT",11,148.48,10.19,-0.64,0.03,2.91,1.02,0,">1 nonsynonymous","F44D G83H G196T",3
"lib2","SARS-CoV-2","AATTAAAATCGCTATA",1,26.78,10.92,0.08,0.06,2.94,1.07,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","AATTAAACAGAACGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V E141Y",2
"lib2","SARS-CoV-2","AATTAAACCTAGAGCA",1,27.72,10.71,-0.12,0.06,2.87,1.08,0,">1 nonsynonymous","P54L T63G T100L",3
"lib2","SARS-CoV-2","AATTAAACGTCCAACT",4,82.65,10.34,-0.49,0.05,2.94,1.05,0,">1 nonsynonymous","T3H E10N N64T P149S",4
"lib2","SARS-CoV-2","AATTAAACTCTGACAA",8,141.06,10.64,-0.2,0.04,2.95,1.05,0,">1 nonsynonymous","R16S T46K",2
"lib2","SARS-CoV-2","AATTAAACTTACTCTC",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I V77M K87S G117V G146K",5
"lib2","SARS-CoV-2","AATTAAAGAATAACTT",7,34.79,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y50S L57K C102Y F126W S200A",5
"lib2","SARS-CoV-2","AATTAAAGACGAGCAG",3,96.76,9.2,-1.63,0.13,2.3,1.05,0.01,">1 nonsynonymous","G152D R179K",2
"lib2","SARS-CoV-2","AATTAAAGAGTATGCT",5,33.08,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F12C G74W",2
"lib2","SARS-CoV-2","AATTAAAGCCTTAAAA",3,60.17,10.96,0.12,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAAAGGACACCAC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","G51N C61* T201G",3
"lib2","SARS-CoV-2","AATTAAAGTAAACCTA",4,3.16,NA,NA,NA,NA,NA,NA,"stop","I2F T15C Y66F N107* G146Q L162E",6
"lib2","SARS-CoV-2","AATTAAATCCTAAACC",6,98.08,8.36,-2.47,0.09,2.09,1.04,0,">1 nonsynonymous","V37I K56F K87S I142A",4
"lib2","SARS-CoV-2","AATTAAATGCCCGTCA",2,21.68,8.91,-1.92,0.12,1.78,1.15,0.01,">1 nonsynonymous","C49Y K114Y",2
"lib2","SARS-CoV-2","AATTAAATTGAAAAAC",4,15.24,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","S43L K87L V103H V115L",4
"lib2","SARS-CoV-2","AATTAAATTTAAAATT",2,12.47,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V65S E76G F99T",3
"lib2","SARS-CoV-2","AATTAAATTTACCTAG",5,0.38,NA,NA,NA,NA,NA,NA,"stop","C6I V52M G83I G86A S139* N157*",6
"lib2","SARS-CoV-2","AATTAAATTTCTAATA",8,19.19,NA,NA,NA,NA,NA,NA,"stop","F44I F99*",2
"lib2","SARS-CoV-2","AATTAAATTTTCCTTT",2,30.67,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V37H G101W",2
"lib2","SARS-CoV-2","AATTAACAAAAACCAA",3,1.15,NA,NA,NA,NA,NA,NA,"stop","E10* C61L G101I F126K",4
"lib2","SARS-CoV-2","AATTAACAAAGAGACA",6,80.63,10.85,0.02,0.04,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTAACAAGCTGACG",1,0.93,NA,NA,NA,NA,NA,NA,"stop","C61S D90E L122*",3
"lib2","SARS-CoV-2","AATTAACAATCAAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","P54* N110L S139I G174V",4
"lib2","SARS-CoV-2","AATTAACAATCGGCCG",9,70.38,10.09,-0.74,0.06,2.83,1.03,0,">1 nonsynonymous","K56W E154P",2
"lib2","SARS-CoV-2","AATTAACACAAATCGT",5,1.3,NA,NA,NA,NA,NA,NA,"stop","A14P T85* I142M S184L",4
"lib2","SARS-CoV-2","AATTAACAGAGATATA",2,103.08,6.47,-4.37,0.44,1.5,1.18,0.02,">1 nonsynonymous","N4Y Y119L G146N",3
"lib2","SARS-CoV-2","AATTAACAGGGAACCG",5,90.97,9.6,-1.24,0.09,2.05,1.02,0,"1 nonsynonymous","A105N",1
"lib2","SARS-CoV-2","AATTAACATCAGTGAA",4,194.18,9.33,-1.5,0.02,2.94,1.05,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","AATTAACATCGAAATT",10,139.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y21A D68L K128D N151S",4
"lib2","SARS-CoV-2","AATTAACATCTATATA",1,7.96,9.51,-1.32,0.17,2.1,1,0.01,">1 nonsynonymous","G9Q V52C N58Q P133V",4
"lib2","SARS-CoV-2","AATTAACATGCCTGTA",6,18.74,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N4W S69G F99E",3
"lib2","SARS-CoV-2","AATTAACATGGCGACA",1,14.06,7.91,-2.92,0.41,1.5,1.11,0.06,">1 nonsynonymous","T15S T55L R78T R127C",4
"lib2","SARS-CoV-2","AATTAACCAAACACCA",7,63.31,10.57,-0.27,0.13,2.83,1.08,0.01,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","AATTAACCAGTCCGCA",9,1.76,NA,NA,NA,NA,NA,NA,"stop","N92G N107* C158V",3
"lib2","SARS-CoV-2","AATTAACCCGAAAGTT",10,8.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R C31D V103K Y165V",4
"lib2","SARS-CoV-2","AATTAACCCGAAATAA",10,118.19,6.09,-4.75,0.54,1.5,1.17,0.01,">1 nonsynonymous","A105E G174C",2
"lib2","SARS-CoV-2","AATTAACCTACTAAGT",4,55.54,9.71,-1.13,0.12,2.17,1.06,0.01,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","AATTAACCTCGACCAA",5,59.91,6,-4.84,1.86,1.5,1.15,0.01,">1 nonsynonymous","L38Y R124T A190G",3
"lib2","SARS-CoV-2","AATTAACGATCATTAT",1,6.12,10.53,-0.31,0.24,2.77,1.03,0.01,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","AATTAACGATTGAGGT",12,243.12,7.41,-3.43,0.12,1.78,1.14,0,">1 nonsynonymous","P7V I28M L60H Y175S",4
"lib2","SARS-CoV-2","AATTAACGCCACAGAA",2,66.43,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y35L G101I",2
"lib2","SARS-CoV-2","AATTAACGCTGCTTTC",1,7.38,10.57,-0.26,0.11,2.94,1.05,0,"1 nonsynonymous","V115S",1
"lib2","SARS-CoV-2","AATTAACTATGACTTT",1,15.12,10.32,-0.51,0.14,2.69,1.12,0.01,">1 nonsynonymous","W106M K199I",2
"lib2","SARS-CoV-2","AATTAACTCAGCGTCA",1,96.33,10.73,-0.1,0.08,2.86,1.07,0,">1 nonsynonymous","N1L T85R",2
"lib2","SARS-CoV-2","AATTAACTTAAAGACA",3,35.18,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D97I N107I P161N Y178H E186G",5
"lib2","SARS-CoV-2","AATTAACTTATCCCGG",12,300.65,8.32,-2.52,0.1,2.9,1.07,0,">1 nonsynonymous","Y159I G174S",2
"lib2","SARS-CoV-2","AATTAAGAACATTTCG",3,17.21,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L5W V11Y R25N F126L V173I V180P F185Y",7
"lib2","SARS-CoV-2","AATTAAGACTACTACA",3,32.77,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44P Y91D D98E",3
"lib2","SARS-CoV-2","AATTAAGATGATCGAC",2,3.03,NA,NA,NA,NA,NA,NA,"stop","P7* F12K S19Y K56T Y119S N151L",6
"lib2","SARS-CoV-2","AATTAAGATGCAGGAC",4,108.58,10.74,-0.1,0.07,2.8,1.12,0,">1 nonsynonymous","L5A K198S",2
"lib2","SARS-CoV-2","AATTAAGATTACGTTA",4,22.08,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","G83V L122N S129H F134S F160L T201L",6
"lib2","SARS-CoV-2","AATTAAGCAGAAAAAC",2,60.71,10.38,-0.46,0.05,2.91,1.04,0,"1 nonsynonymous","Y35C",1
"lib2","SARS-CoV-2","AATTAAGCCAGAAGAC",11,25.4,8.82,-2.01,0.24,1.59,1.12,0.03,">1 nonsynonymous","E10Y T46I S139Y",3
"lib2","SARS-CoV-2","AATTAAGGAAATAAGC",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F D137F",2
"lib2","SARS-CoV-2","AATTAAGGAGCCCTAT",16,88.43,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5V E76V G86L",3
"lib2","SARS-CoV-2","AATTAAGGAGGGAAAG",2,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y S19H Y50T L60V C102L",5
"lib2","SARS-CoV-2","AATTAAGGAGTCCCAA",11,229.52,10.82,-0.02,0.05,2.98,1.04,0,">1 nonsynonymous","G9S V32T T140K",3
"lib2","SARS-CoV-2","AATTAAGGGCACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N171*",1
"lib2","SARS-CoV-2","AATTAAGTAACAATAC",9,217.44,9.64,-1.19,0.03,2.9,1.09,0,">1 nonsynonymous","G116H G166V",2
"lib2","SARS-CoV-2","AATTAAGTAACCTAAA",10,67.36,8.11,-2.72,0.13,1.55,1.07,0.01,">1 nonsynonymous","G83R Y91K V103I L122D",4
"lib2","SARS-CoV-2","AATTAAGTAAGAATAG",2,12.43,10.27,-0.57,0.11,2.86,1,0,">1 nonsynonymous","T100D S164P",2
"lib2","SARS-CoV-2","AATTAAGTATATGGAC",2,41.33,10.87,0.03,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAAGTCACTTACA",5,50.09,10.89,0.06,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAAGTGCGGACAT",1,17.73,9.19,-1.65,0.12,2.41,1.07,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","AATTAATAAAAAATAT",8,13.5,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90M D97T",2
"lib2","SARS-CoV-2","AATTAATACCACCGAT",2,71.53,9.42,-1.42,0.08,2.75,1.05,0,">1 nonsynonymous","D75E T100S S129G G174L",4
"lib2","SARS-CoV-2","AATTAATACGCCGGAA",5,48.97,7.2,-3.64,0.17,1.52,1.15,0.01,">1 nonsynonymous","F44K P96R L125F",3
"lib2","SARS-CoV-2","AATTAATACTACCGAT",4,48.54,10.9,0.07,0.07,2.91,1.12,0,"1 nonsynonymous","Q84G",1
"lib2","SARS-CoV-2","AATTAATAGCAAATAC",24,377.54,10.83,-0.01,0.04,2.96,1.06,0,">1 nonsynonymous","I28M S36R",2
"lib2","SARS-CoV-2","AATTAATATAAAGTAA",3,55.37,9.94,-0.9,0.05,2.92,1.07,0,">1 nonsynonymous","Y119R E141K",2
"lib2","SARS-CoV-2","AATTAATATGTTTTAA",6,87.67,10.68,-0.15,0.04,2.9,1.11,0,">1 nonsynonymous","F44L T201I",2
"lib2","SARS-CoV-2","AATTAATCACGAAATA",3,32.41,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R136T P177K",2
"lib2","SARS-CoV-2","AATTAATCACGGGAAC",2,89.94,10.18,-0.66,0.03,3,1.04,0,">1 nonsynonymous","N4T A42R E154V",3
"lib2","SARS-CoV-2","AATTAATCTATCGCCA",1,3.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","AATTAATCTTAGAGGC",4,26.35,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","R73T G83P S139I P169Y",4
"lib2","SARS-CoV-2","AATTAATGAACGACAT",6,150.09,8.4,-2.44,0.09,2.07,1.04,0,">1 nonsynonymous","N24V S53L P96S F156G",4
"lib2","SARS-CoV-2","AATTAATGACACTTAT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","C6K I28* Y119M",3
"lib2","SARS-CoV-2","AATTAATGAGTACAGT",7,76.89,9.38,-1.45,0.06,2.78,1.07,0,">1 nonsynonymous","I2K A33Y G74Y V115M",4
"lib2","SARS-CoV-2","AATTAATTACTATAAC",2,50.35,10.96,0.12,0.06,2.93,1.09,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","AATTAATTACTTTTTG",2,11.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101W N118I N157L T201C",4
"lib2","SARS-CoV-2","AATTAATTCGCATATA",1,14.3,10.83,-0.01,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAATTGATCCCGA",5,77.96,10.16,-0.68,0.05,2.51,1.11,0,"1 nonsynonymous","W106Q",1
"lib2","SARS-CoV-2","AATTAATTGTGAGTTA",2,47.14,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","P54S L60A A105F E135A",4
"lib2","SARS-CoV-2","AATTAATTTAGAGAAC",1,24.28,10.61,-0.23,0.07,3,1,0,">1 nonsynonymous","D98G Q163S",2
"lib2","SARS-CoV-2","AATTAATTTAGGCACA",2,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L C102P R136Y",3
"lib2","SARS-CoV-2","AATTACAAAAAACTGA",4,39.76,10.92,0.09,0.06,2.95,1.05,0,">1 nonsynonymous","I104W L122A",2
"lib2","SARS-CoV-2","AATTACAAACTATTCA",8,70.35,7.55,-3.29,0.36,1.5,1.21,0.03,">1 nonsynonymous","Y35L Y123M V182L A190S",4
"lib2","SARS-CoV-2","AATTACAAATAGAAAT",5,40.21,10.03,-0.8,0.07,2.85,1.05,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","AATTACAACCAAAAGA",5,29.51,8.51,-2.32,0.17,1.5,1.17,0.01,">1 nonsynonymous","W106L P149L G152N T170S",4
"lib2","SARS-CoV-2","AATTACAACCAGTTGG",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I Y35T S139H S184H",4
"lib2","SARS-CoV-2","AATTACAAGCTATCAC",1,18.12,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","G86L E141I",2
"lib2","SARS-CoV-2","AATTACAATCCCCCAA",3,32.31,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N64Y L95G G172A",3
"lib2","SARS-CoV-2","AATTACAATGTGATCT",13,189.64,10.82,-0.02,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTACACACAGCATT",1,15.75,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","G9I S45L F62S P149Q G166Q P169T",6
"lib2","SARS-CoV-2","AATTACACAGTAGACA",2,79.94,10.47,-0.37,0.05,2.86,1.09,0,">1 nonsynonymous","N4M N64V L95V",3
"lib2","SARS-CoV-2","AATTACACTAGATCTA",8,61.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F8L G86R K94C R124V Y143L G155Y K198Q",7
"lib2","SARS-CoV-2","AATTACACTCCACAAG",10,1166.77,10.37,-0.47,0.03,2.96,1.05,0,">1 nonsynonymous","V37A K87W G116P",3
"lib2","SARS-CoV-2","AATTACAGACTTGCAG",12,89.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A P133I",2
"lib2","SARS-CoV-2","AATTACATAACCTCAG",4,150.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23T F47I G116L P177K",4
"lib2","SARS-CoV-2","AATTACATAATATGCC",1,9.52,7,-3.83,0.31,1.5,1.04,0.04,">1 nonsynonymous","C6E Y39P L111R P133S F156V",5
"lib2","SARS-CoV-2","AATTACATCTTAATAA",3,39.31,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14S S29N S36L N64G F70S V173D",6
"lib2","SARS-CoV-2","AATTACATGGCTAGCT",3,24.87,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V11C T46L N92P",3
"lib2","SARS-CoV-2","AATTACATTTTACTAA",1,56.94,7.27,-3.57,0.24,1.5,1.08,0.01,">1 nonsynonymous","C31Y D90Y Y119S",3
"lib2","SARS-CoV-2","AATTACCAGTACAAAA",10,83.23,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F99N N107H",2
"lib2","SARS-CoV-2","AATTACCCAACGAAAG",8,79.34,9.93,-0.91,0.1,2.29,1.02,0,">1 nonsynonymous","R16V V181M",2
"lib2","SARS-CoV-2","AATTACCCACCCCGTA",1,36.93,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N64H D97I G172L",3
"lib2","SARS-CoV-2","AATTACCCATAACATT",9,192.37,10.79,-0.05,0.04,2.9,1.1,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","AATTACCCCGAAATTT",5,90.82,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36C N107R D112S",3
"lib2","SARS-CoV-2","AATTACCCGGCCATAT",5,69.17,9.55,-1.28,0.05,2,1.13,0,">1 nonsynonymous","S41P F134C G196M",3
"lib2","SARS-CoV-2","AATTACCGACATTAGG",15,3.21,NA,NA,NA,NA,NA,NA,"stop","N92D W106*",2
"lib2","SARS-CoV-2","AATTACCGATAGAATA",8,237.1,10.14,-0.7,0.05,2.68,1.03,0,">1 nonsynonymous","K56A D90Y D97E T201N",4
"lib2","SARS-CoV-2","AATTACCTAAACGTGT",6,37.32,10.85,0.02,0.06,3,1.02,0,">1 nonsynonymous","G9V T85R P197T",3
"lib2","SARS-CoV-2","AATTACCTATAATGAA",3,34.16,11.15,0.31,0.05,2.97,1.01,0,">1 nonsynonymous","N64Y N110S Q168H",3
"lib2","SARS-CoV-2","AATTACGAATACCACA",2,19.66,10.36,-0.48,0.08,2.95,1.08,0,">1 nonsynonymous","N58V S129H",2
"lib2","SARS-CoV-2","AATTACGAATCCCAGG",2,9.18,6,-4.84,2,3,1.04,0,">1 nonsynonymous","I28E S45C N92Q",3
"lib2","SARS-CoV-2","AATTACGAATTTGATA",4,37.54,10.59,-0.25,0.06,2.93,1.04,0,">1 nonsynonymous","A14G Y35I D59T I138L",4
"lib2","SARS-CoV-2","AATTACGACCAAATCA",6,26.63,7.87,-2.96,0.45,1.5,1.03,0.06,">1 nonsynonymous","A14F V65M S139Y",3
"lib2","SARS-CoV-2","AATTACGATAGAAGGT",8,37.65,8.43,-2.41,0.38,1.5,1,0.06,">1 nonsynonymous","Y50L E141D P191I",3
"lib2","SARS-CoV-2","AATTACGATGTTATAC",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V F126L",2
"lib2","SARS-CoV-2","AATTACGCGTTACATA",3,42.96,10.89,0.05,0.06,2.95,1.06,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","AATTACGCTTAATTGG",1,6.48,9.84,-1,0.24,2.21,1.24,0.01,">1 nonsynonymous","F12L K26V A105W K128S",4
"lib2","SARS-CoV-2","AATTACGGCACCTGCT",5,11.51,9.82,-1.02,0.16,1.97,1,0.01,">1 nonsynonymous","A14V V37I W106T S200I",4
"lib2","SARS-CoV-2","AATTACGGCCTTTAAC",7,180.51,10.82,-0.02,0.04,2.95,1.05,0,"1 nonsynonymous","G196E",1
"lib2","SARS-CoV-2","AATTACGTAAAACAAA",4,62.15,9.6,-1.24,0.07,2,1.03,0,">1 nonsynonymous","P7L S139F",2
"lib2","SARS-CoV-2","AATTACGTGCATTAGG",4,62.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59F S164T G172V",3
"lib2","SARS-CoV-2","AATTACGTGCGAACTA",13,190.11,10.3,-0.54,0.05,2.56,1.07,0,">1 nonsynonymous","D75A A81R Q163T",3
"lib2","SARS-CoV-2","AATTACTAAAAAAACC",4,13.19,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","N120G V182F",2
"lib2","SARS-CoV-2","AATTACTAACAAGGCG",7,135.77,10.45,-0.38,0.03,2.86,1.04,0,">1 nonsynonymous","D34N S129N F160T",3
"lib2","SARS-CoV-2","AATTACTACATGAAGG",4,1.31,NA,NA,NA,NA,NA,NA,"stop","T3L I104* K128H",3
"lib2","SARS-CoV-2","AATTACTAGGACTTCC",6,30.51,9.53,-1.31,0.03,2.89,1.09,0,">1 nonsynonymous","G83C Y119F",2
"lib2","SARS-CoV-2","AATTACTATTGAAAGC",6,76.85,8.59,-2.25,0.08,1.78,1.11,0,">1 nonsynonymous","S36L D112V",2
"lib2","SARS-CoV-2","AATTACTCGATATACA",8,70.28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9Q V20R Y178H",3
"lib2","SARS-CoV-2","AATTACTCTAAGGATC",4,1.3,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib2","SARS-CoV-2","AATTACTGCGGATATG",3,115.78,10.4,-0.43,0.04,2.97,1.04,0,">1 nonsynonymous","G174M Y178F",2
"lib2","SARS-CoV-2","AATTACTGCTCACAGA",1,33.03,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V115G S129C L131N I138H N151L",5
"lib2","SARS-CoV-2","AATTACTGGCAATCTT",1,16.42,7.52,-3.32,0.25,1.5,1.05,0.02,">1 nonsynonymous","A22R L60K D137N",3
"lib2","SARS-CoV-2","AATTACTTAATAATCG",21,9.4,NA,NA,NA,NA,NA,NA,"stop","D90I G172*",2
"lib2","SARS-CoV-2","AATTACTTAATATACA",2,53.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N64I W106P I142N",3
"lib2","SARS-CoV-2","AATTAGAAAATAATAG",2,83.33,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","T3C F17N R27M S184Y K198F",5
"lib2","SARS-CoV-2","AATTAGAACATCCTTG",8,94.34,10.84,0,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAGAAGTAGTCAA",5,113.28,7.53,-3.3,0.22,1.5,1.1,0.02,">1 nonsynonymous","S43V D112I G166Y",3
"lib2","SARS-CoV-2","AATTAGACAAGGGTTG",4,16.64,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","K56Y D112F Y119W L131V L183Y",5
"lib2","SARS-CoV-2","AATTAGACTTCCGAAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N40L T46* D59Q F134L S200R",5
"lib2","SARS-CoV-2","AATTAGAGTGGTGACC",6,81.47,9.85,-0.99,0.04,2.16,1.03,0,"1 nonsynonymous","F99H",1
"lib2","SARS-CoV-2","AATTAGAGTTACAATA",1,10.59,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I138A C150L P169A",3
"lib2","SARS-CoV-2","AATTAGATACAACTCC",3,37.98,10.1,-0.73,0.06,2.75,1.06,0,">1 nonsynonymous","Y35A D90K",2
"lib2","SARS-CoV-2","AATTAGATACTTAACA",3,29.5,6.22,-4.61,0.98,1.5,1.15,0.04,">1 nonsynonymous","A18L Y35P V65E R124T",4
"lib2","SARS-CoV-2","AATTAGATATTACACT",1,18.24,11.03,0.2,0.09,2.94,1.07,0,"1 nonsynonymous","P197F",1
"lib2","SARS-CoV-2","AATTAGATCATACCAT",1,8.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29F D112A I142Q F167L",4
"lib2","SARS-CoV-2","AATTAGCAAAACCAGG",4,40.12,10.8,-0.04,0.08,2.86,1.1,0,"1 nonsynonymous","Y50F",1
"lib2","SARS-CoV-2","AATTAGCAACTCAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","K132* I142* N151I",3
"lib2","SARS-CoV-2","AATTAGCACACCTATA",3,68.8,10.82,-0.02,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTAGCACTCATAGA",6,61.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V20S V32K G51K D68T T100L K114S",6
"lib2","SARS-CoV-2","AATTAGCAGCTACACA",3,63.53,9.92,-0.92,0.07,2.19,1.07,0,">1 nonsynonymous","N1F Y35R",2
"lib2","SARS-CoV-2","AATTAGCAGTCCTAAT",4,39.88,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S53M G86V P96C G101V K132S P161V",6
"lib2","SARS-CoV-2","AATTAGCATTTGCTGA",10,0.59,NA,NA,NA,NA,NA,NA,"stop","G9* F44W V77* P82Q C102R",5
"lib2","SARS-CoV-2","AATTAGCCATTAACCC",8,150.92,8.74,-2.1,0.05,2.96,1.06,0,">1 nonsynonymous","L122M I142E G152Q",3
"lib2","SARS-CoV-2","AATTAGCCGAGTTCTA",6,31.25,10.71,-0.13,0.03,2.98,1.04,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","AATTAGCCTAACAGAT",9,87.8,10.17,-0.67,0.03,2.89,1.03,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","AATTAGCGACAGCCAG",2,10.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y F99M W106H N120L",4
"lib2","SARS-CoV-2","AATTAGCGGATTACGC",2,18.3,6,-4.84,2,3,1.04,0,">1 nonsynonymous","R27L Y35V T55A G101M N107Q D112N R136P T201L",8
"lib2","SARS-CoV-2","AATTAGCGTATTATAT",2,20.58,10.27,-0.57,0.06,2.94,1.05,0,">1 nonsynonymous","V37M S45V",2
"lib2","SARS-CoV-2","AATTAGCTATGTTCAT",5,1.24,NA,NA,NA,NA,NA,NA,"stop","E10A G74T G86K F99I S113* T193Q",6
"lib2","SARS-CoV-2","AATTAGGAAACTTTTT",7,160.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35R Y93F R136P",3
"lib2","SARS-CoV-2","AATTAGGAACTTTCAA",9,74.17,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51P K56F Y121S G172R",4
"lib2","SARS-CoV-2","AATTAGGAAGTCAAGT",4,14.16,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41V D137G K198Y",3
"lib2","SARS-CoV-2","AATTAGGACTTAGATA",2,14.56,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y91P N109F G174K",3
"lib2","SARS-CoV-2","AATTAGGATAAAAAAA",2,34.42,10.72,-0.12,0.04,2.91,1.08,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","AATTAGGCCGCCACAT",5,48.21,10.09,-0.74,0.08,2.76,1.06,0,"1 nonsynonymous","P133K",1
"lib2","SARS-CoV-2","AATTAGGGACTGCAGT",2,37.03,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V20A T46L P161H",3
"lib2","SARS-CoV-2","AATTAGGGGTTGACAC",1,9.61,10.07,-0.77,0.22,2.08,1.07,0.01,">1 nonsynonymous","T15D Y21F Y66A",3
"lib2","SARS-CoV-2","AATTAGGGTTCCATGT",6,29.05,8.82,-2.01,0.08,2.13,1.04,0.01,">1 nonsynonymous","L60D I142K T201A",3
"lib2","SARS-CoV-2","AATTAGGTAAGTTATG",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T F99Y",2
"lib2","SARS-CoV-2","AATTAGGTACCGACAT",11,224.02,10.58,-0.26,0.05,2.91,1.04,0,">1 nonsynonymous","T63L D97K Y178F",3
"lib2","SARS-CoV-2","AATTAGTACGGACATA",2,17.94,10.32,-0.52,0.06,2.96,1.07,0,">1 nonsynonymous","A42R K87M T100S",3
"lib2","SARS-CoV-2","AATTAGTAGCGTTCTG",4,39.23,7.79,-3.05,0.41,1.5,1.06,0.07,">1 nonsynonymous","C6A A67V S113I N151L F156R Y178A",6
"lib2","SARS-CoV-2","AATTAGTCAATTGCGC",5,17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94V V181S",2
"lib2","SARS-CoV-2","AATTAGTCACTAAGAC",10,117.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63L Y123L A145F G152S",4
"lib2","SARS-CoV-2","AATTAGTCTCATAATA",8,57.8,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","G101W",1
"lib2","SARS-CoV-2","AATTAGTGCTTAACAT",5,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S I104G R127S",3
"lib2","SARS-CoV-2","AATTAGTTGCAACTCG",1,27.78,10.7,-0.14,0.06,2.96,1.02,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","AATTAGTTTGTGATAA",1,0.81,NA,NA,NA,NA,NA,NA,"stop","K26L G51T F62* N157C",4
"lib2","SARS-CoV-2","AATTATAAAAGCGGTA",10,243.45,10.53,-0.31,0.04,2.93,1.05,0,">1 nonsynonymous","L60A N120L",2
"lib2","SARS-CoV-2","AATTATAAATACCTGA",1,16.67,10.29,-0.55,0.13,2.07,1.12,0.01,">1 nonsynonymous","R136T V173N",2
"lib2","SARS-CoV-2","AATTATAACAGTGTGT",8,51.83,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y35I K56Y G86C Y93L N107W P169L",6
"lib2","SARS-CoV-2","AATTATAACATAAATA",8,65.19,10.06,-0.78,0.08,2.78,1.05,0,">1 nonsynonymous","S45F S147N G166S",3
"lib2","SARS-CoV-2","AATTATAAGAAGTAGA",2,43.26,8.37,-2.46,0.14,2.7,1.06,0.01,">1 nonsynonymous","K87I K94F Y119P",3
"lib2","SARS-CoV-2","AATTATAAGAGTAATC",1,59.06,11.13,0.29,0.04,3,1.01,0,">1 nonsynonymous","A42M L122K I138L",3
"lib2","SARS-CoV-2","AATTATAAGATCTCTC",3,27.12,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","I80H F99H N120E",3
"lib2","SARS-CoV-2","AATTATAAGCAGTTAC",7,127.72,8.63,-2.2,0.1,1.5,1.11,0,">1 nonsynonymous","N24V L162Y",2
"lib2","SARS-CoV-2","AATTATAAGGCGACAA",5,33.49,10.15,-0.68,0.08,2.66,1.13,0,">1 nonsynonymous","S19G A42M",2
"lib2","SARS-CoV-2","AATTATAATACTCGGC",6,37.86,10.85,0.01,0.07,2.94,1.07,0,"1 nonsynonymous","D59G",1
"lib2","SARS-CoV-2","AATTATAATTCAACTG",7,34.83,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y39G F47L K56R N107L",4
"lib2","SARS-CoV-2","AATTATACAACCTCAC",4,54.54,10.26,-0.58,0.05,2.99,1.04,0,"1 nonsynonymous","F156M",1
"lib2","SARS-CoV-2","AATTATACAGGGGACT",3,62.7,10.28,-0.56,0.05,2.76,1.05,0,">1 nonsynonymous","L5T W106Y",2
"lib2","SARS-CoV-2","AATTATACAGTGTAAA",2,5.83,6.23,-4.61,1.76,1.5,1.3,0.08,">1 nonsynonymous","G9E F99P",2
"lib2","SARS-CoV-2","AATTATACCACCAGCG",10,77.37,6.51,-4.33,0.41,1.5,1.17,0.02,">1 nonsynonymous","G9E S45L F99Y Y119T",4
"lib2","SARS-CoV-2","AATTATACCCACACAA",2,23.2,10.2,-0.63,0.07,2.98,1.02,0,">1 nonsynonymous","A14S T170S",2
"lib2","SARS-CoV-2","AATTATACCCCTATCC",6,57.15,9.17,-1.67,0.2,1.66,1.18,0.02,">1 nonsynonymous","S41H Q84W D90T",3
"lib2","SARS-CoV-2","AATTATACTCACGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11P R73M D90S P169V G174*",5
"lib2","SARS-CoV-2","AATTATAGAAATATTA",8,149.31,9.54,-1.3,0.07,1.89,1.06,0,">1 nonsynonymous","R16N A81N D90R",3
"lib2","SARS-CoV-2","AATTATAGAATCCACC",6,23.93,7.94,-2.9,0.45,1.5,1,0.05,">1 nonsynonymous","W106A K128R P161S",3
"lib2","SARS-CoV-2","AATTATAGAGTACTTA",4,15.27,6.07,-4.76,2,1.5,1.15,0.03,">1 nonsynonymous","E10T K94V G152H F156M",4
"lib2","SARS-CoV-2","AATTATAGCACAAACA",1,16.5,7.05,-3.78,0.58,1.5,1.05,0.07,">1 nonsynonymous","F8G S45Y R127D E141W N157L",5
"lib2","SARS-CoV-2","AATTATATACTAATAA",1,23.57,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F17L Y91L Y119P F167T",4
"lib2","SARS-CoV-2","AATTATATATACTTAT",2,35.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33P F99S Y175T",3
"lib2","SARS-CoV-2","AATTATATGGCCCTAA",11,148.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S53M L60T Y91T L131M T201Q",5
"lib2","SARS-CoV-2","AATTATATGGGACGGC",1,67.11,10.42,-0.42,0.07,2.91,1.07,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","AATTATATTCTAGACG",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M K87F F134M V182D",4
"lib2","SARS-CoV-2","AATTATATTTGAAGAT",2,31.98,9.93,-0.91,0.09,2.65,1,0,">1 nonsynonymous","A81R G116L",2
"lib2","SARS-CoV-2","AATTATCAAAAATGCC",1,11.18,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A14T V71L G101R",3
"lib2","SARS-CoV-2","AATTATCAAAGTAGTG",4,29.52,8.87,-1.96,0.08,2.5,1.02,0,"1 nonsynonymous","Y165V",1
"lib2","SARS-CoV-2","AATTATCAACACCTCG",3,43.44,10.84,0,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTATCATGTACTAG",4,53.81,9.92,-0.92,0.06,2.76,1.01,0,">1 nonsynonymous","S29I E141N Q168M",3
"lib2","SARS-CoV-2","AATTATCCATGTCTTA",5,155.03,10.77,-0.06,0.04,2.91,1.07,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","AATTATCCCAGAAATT",2,91.96,8.42,-2.42,0.13,3,1.07,0.01,"1 nonsynonymous","N157R",1
"lib2","SARS-CoV-2","AATTATCCCTGATTTC",6,95.58,10.82,-0.02,0.05,2.91,1.1,0,">1 nonsynonymous","D97T S200L",2
"lib2","SARS-CoV-2","AATTATCGAGTGGTGC",4,72.39,10.34,-0.49,0.04,2.93,1.04,0,"1 nonsynonymous","T15I",1
"lib2","SARS-CoV-2","AATTATCGCCACGCCT",2,27.12,9.72,-1.11,0.19,2.25,1,0.01,">1 nonsynonymous","S36P G152V",2
"lib2","SARS-CoV-2","AATTATCGCGATTGCG",3,33.58,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","E10L R127E I142V",3
"lib2","SARS-CoV-2","AATTATCTATGCAGCA",9,98.98,10.71,-0.13,0.04,3,1.03,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","AATTATCTCGCTCACC",4,51.68,6,-4.84,1.18,1.5,1.12,0.01,">1 nonsynonymous","D98S S108P",2
"lib2","SARS-CoV-2","AATTATCTGTCTGTAA",13,269.58,8.93,-1.91,0.05,2.84,1.08,0,">1 nonsynonymous","L60P Y119F",2
"lib2","SARS-CoV-2","AATTATCTTACTTAGC",2,28.2,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","P133E V180E",2
"lib2","SARS-CoV-2","AATTATGAAAAGACTT",18,246.29,10.85,0.01,0.04,2.92,1.07,0,"1 nonsynonymous","S200D",1
"lib2","SARS-CoV-2","AATTATGAACACGAAA",2,15.82,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","C31A F167H",2
"lib2","SARS-CoV-2","AATTATGAAGACCAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S45R C61A F126* A190T",4
"lib2","SARS-CoV-2","AATTATGAAGGGTATT",2,7.21,8.81,-2.03,0.48,1.68,1.2,0.07,">1 nonsynonymous","L38C D97G P149A",3
"lib2","SARS-CoV-2","AATTATGAGAGTTTGA",1,22.5,6,-4.84,1.43,1.5,1.22,0.02,">1 nonsynonymous","T63I P82K Y123S T140G N151Q P161A",6
"lib2","SARS-CoV-2","AATTATGCAGCTTACG",3,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121N D137I",2
"lib2","SARS-CoV-2","AATTATGCTGGGTTAA",10,10.18,NA,NA,NA,NA,NA,NA,"stop","A33* T55C K94Y N157R",4
"lib2","SARS-CoV-2","AATTATGGGTCTCTTT",7,21.28,6.59,-4.25,0.39,1.99,1.15,0.01,">1 nonsynonymous","L5W Y66Q R124W E141I P149A",5
"lib2","SARS-CoV-2","AATTATGTATAAAAGC",9,216.22,10.42,-0.42,0.04,2.96,1.05,0,">1 nonsynonymous","C61M G155A",2
"lib2","SARS-CoV-2","AATTATGTATAAGCCG",11,174.34,9.93,-0.91,0.06,2.19,1.09,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","AATTATGTGAGATATT",1,47.77,10.78,-0.06,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTATGTTAACGGCT",5,76.64,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43W N64L Q144Y F160C G172L",5
"lib2","SARS-CoV-2","AATTATTAAACAACTG",3,37.72,10.77,-0.06,0.18,2.83,1,0.01,">1 nonsynonymous","N1A K56D G83L",3
"lib2","SARS-CoV-2","AATTATTAAGACATGG",4,47.67,10.06,-0.78,0.07,2.48,1.08,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AATTATTAAGGTTTTT",7,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G L60M N120G",3
"lib2","SARS-CoV-2","AATTATTAATTGAATT",2,6.62,10.22,-0.62,0.34,2.86,1.05,0.05,">1 nonsynonymous","N107R S129N",2
"lib2","SARS-CoV-2","AATTATTACTAACAAA",2,39.1,10.82,-0.02,0.07,2.89,1.14,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","AATTATTAGTTTGGCT",6,77.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39E P133W E141C T148W V182I",5
"lib2","SARS-CoV-2","AATTATTATAGAGTGG",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R A33V N58I D112T",4
"lib2","SARS-CoV-2","AATTATTATTCCCTTA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","T15I R124F F160P C195*",4
"lib2","SARS-CoV-2","AATTATTATTGATTGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113G S129M N157D",3
"lib2","SARS-CoV-2","AATTATTCAAAGTACT",2,14.69,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","Y35I V71I A105K",3
"lib2","SARS-CoV-2","AATTATTCGAATACCG",5,126.11,10.45,-0.39,0.03,2.79,1.08,0,">1 nonsynonymous","T3R N109K F134N",3
"lib2","SARS-CoV-2","AATTATTCTTTGAAGT",6,38.97,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N4H T46D Y91Q D98S G146L",5
"lib2","SARS-CoV-2","AATTATTGAAAAAGAA",1,10.12,10.81,-0.03,0.12,2.87,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATTATTGAAAACACA",1,22.55,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y35Q F99Y N107S R124S",4
"lib2","SARS-CoV-2","AATTATTGAACAATTT",6,53.27,7.01,-3.83,0.32,1.5,1.23,0.02,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","AATTATTGATGTTTAT",8,1.56,NA,NA,NA,NA,NA,NA,"stop","D59A P96*",2
"lib2","SARS-CoV-2","AATTATTGCATTTGAT",15,85.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V20M S41Q I72A V77F D98S",5
"lib2","SARS-CoV-2","AATTATTGCTTTTTCG",1,29.41,10.71,-0.13,0.06,2.95,1.04,0,">1 nonsynonymous","G9F T140R K198R",3
"lib2","SARS-CoV-2","AATTATTTAAACTGAT",4,54.6,10.49,-0.34,0.03,2.99,1.02,0,">1 nonsynonymous","Q84R K87V E135A",3
"lib2","SARS-CoV-2","AATTATTTACTAGGCA",10,44.85,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S45P L122P T201A",3
"lib2","SARS-CoV-2","AATTATTTGTATGCAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I T100G W106Q Y119L",4
"lib2","SARS-CoV-2","AATTATTTTCAGCCGC",3,19.27,10.01,-0.83,0.12,2.53,1,0.01,">1 nonsynonymous","V37S V52A A81Q",3
"lib2","SARS-CoV-2","AATTATTTTTGCATAA",1,16.94,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D75R A105R N151H C158V",4
"lib2","SARS-CoV-2","AATTCAAAAGGCCCAA",1,154.08,10.59,-0.25,0.04,2.96,1,0,">1 nonsynonymous","K128S Y178M T201V",3
"lib2","SARS-CoV-2","AATTCAAAAGTATTAA",1,9.53,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R16Y T55N G83L F167L",4
"lib2","SARS-CoV-2","AATTCAAAGTAAACAG",1,24.84,10.43,-0.4,0.04,2.97,1.03,0,">1 nonsynonymous","F47I N64I",2
"lib2","SARS-CoV-2","AATTCAAATCTCCACT",8,60.32,10.01,-0.82,0.16,2.31,1.04,0.01,">1 nonsynonymous","P133S L162V",2
"lib2","SARS-CoV-2","AATTCAAATTAAAAAC",4,133.12,9.76,-1.08,0.05,2.65,1.03,0,">1 nonsynonymous","D90L I104M G116S",3
"lib2","SARS-CoV-2","AATTCAACCACACAGT",2,4.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49W",1
"lib2","SARS-CoV-2","AATTCAAGACATAACT",2,62.52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25F Y35H G74F A89N D98F Y178V",6
"lib2","SARS-CoV-2","AATTCAAGACCTGTAT",4,45.95,7.73,-3.11,0.2,1.57,1.11,0.01,">1 nonsynonymous","A42T T55I D97E P133G G155C",5
"lib2","SARS-CoV-2","AATTCAAGAGTGATAG",1,76.74,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","V37S A89F S108P Y119T",4
"lib2","SARS-CoV-2","AATTCAAGTAATTATT",9,38.35,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","P82D T148S G152F",3
"lib2","SARS-CoV-2","AATTCAAGTCATTTGT",6,70.81,10.65,-0.18,0.05,2.9,1.1,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","AATTCAATGCATGGTC",10,51.39,6,-4.84,1.22,3,1.08,0,">1 nonsynonymous","I28A P54T D90F C102N T140S P149S",6
"lib2","SARS-CoV-2","AATTCAATGTAGTGTA",7,0.27,NA,NA,NA,NA,NA,NA,"stop","F17* V103R P149W L183*",4
"lib2","SARS-CoV-2","AATTCAATTGCAATTT",23,282.24,10.53,-0.3,0.03,2.95,1.03,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","AATTCAATTTTTTGCA",4,0,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib2","SARS-CoV-2","AATTCACAACACCTTT",11,197.48,9.07,-1.76,0.08,1.75,1.11,0,">1 nonsynonymous","C6A F12H",2
"lib2","SARS-CoV-2","AATTCACATACATAGA",9,163.06,10.66,-0.17,0.03,2.93,1.07,0,"1 nonsynonymous","Y39N",1
"lib2","SARS-CoV-2","AATTCACATACTGTTA",7,34.44,8.64,-2.2,0.18,1.66,1.15,0.01,">1 nonsynonymous","F12A K128I I138K S147N",4
"lib2","SARS-CoV-2","AATTCACATAGGATGG",1,7.03,8.71,-2.13,0.25,1.87,1,0.03,"1 nonsynonymous","C102A",1
"lib2","SARS-CoV-2","AATTCACCACACAAGG",7,80.73,10.74,-0.1,0.04,2.92,1.11,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AATTCACCACACTAGT",8,52.3,8.11,-2.72,0.33,1.5,1.2,0.03,">1 nonsynonymous","A89Y Y119V",2
"lib2","SARS-CoV-2","AATTCACCAGACATCA",3,25.16,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T46P L60S C102V Y119I",4
"lib2","SARS-CoV-2","AATTCACCCCAAGAAT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","R27* A33W",2
"lib2","SARS-CoV-2","AATTCACGCTTTCTAG",24,364.92,10.83,0,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTCACTAATACTTT",2,16.63,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","N24K V52M W106P",3
"lib2","SARS-CoV-2","AATTCACTGTTTTGAA",2,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","AATTCACTTGAAAGAC",2,37.23,10.8,-0.03,0.05,2.95,1.08,0,">1 nonsynonymous","A42M K56R S200T",3
"lib2","SARS-CoV-2","AATTCAGAGTAAATGA",4,40.02,10.9,0.06,0.06,2.98,1.03,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","AATTCAGATAGTGACC",2,9.61,6.33,-4.51,0.94,1.5,1.26,0.03,">1 nonsynonymous","P82T D98V",2
"lib2","SARS-CoV-2","AATTCAGCAAACACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35V W106* Y123N Y175I",4
"lib2","SARS-CoV-2","AATTCAGCTTCCCAAT",9,172.39,10.81,-0.02,0.04,2.84,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTCAGGGGCTAAAA",1,6.85,10.97,0.14,0.18,2.72,1.31,0.01,">1 nonsynonymous","A42K K198I",2
"lib2","SARS-CoV-2","AATTCAGTATTTCTAC",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98W Y121C",2
"lib2","SARS-CoV-2","AATTCATAATAAACGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5P N107I P149Y V181*",4
"lib2","SARS-CoV-2","AATTCATACTACGCGA",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P R124Y C158V G166I",4
"lib2","SARS-CoV-2","AATTCATCAAACACAG",6,6.26,8.17,-2.66,0.5,1.5,1.03,0.06,">1 nonsynonymous","T46L I104K",2
"lib2","SARS-CoV-2","AATTCATGCAATGATA",3,9.26,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","T85W E141P P161R R179F",4
"lib2","SARS-CoV-2","AATTCATGGTTATAAG",3,16.41,10.14,-0.7,0.11,2.74,1.07,0.01,">1 nonsynonymous","G83D I138Q",2
"lib2","SARS-CoV-2","AATTCATGTTAATTTT",4,15.27,10.59,-0.24,0.08,2.7,1.26,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","AATTCATTAAAAAAAA",7,96.71,10.9,0.06,0.06,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTCATTGTTACAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H S69R R124I T201S",4
"lib2","SARS-CoV-2","AATTCATTTATGTAAG",8,93.7,8.88,-1.96,0.06,2.71,1.06,0,">1 nonsynonymous","A18K N157S",2
"lib2","SARS-CoV-2","AATTCCAAAATGAAAC",9,0,NA,NA,NA,NA,NA,NA,"stop","G51V V71* G83I E135S V153S",5
"lib2","SARS-CoV-2","AATTCCAACATGCACA",13,0,NA,NA,NA,NA,NA,NA,"stop","F17* V37Q L111*",3
"lib2","SARS-CoV-2","AATTCCAACATTGGCA",8,119.87,8.36,-2.48,0.11,2.47,1.05,0,">1 nonsynonymous","L5F T55S S113L",3
"lib2","SARS-CoV-2","AATTCCAAGCCGAAAG",3,0.67,NA,NA,NA,NA,NA,NA,"stop","N4K W23T D90A Y123*",4
"lib2","SARS-CoV-2","AATTCCACAGAAACCA",7,7.03,NA,NA,NA,NA,NA,NA,"stop","L5W S69W A105* P133N",4
"lib2","SARS-CoV-2","AATTCCACATAATAGT",6,60.02,6,-4.84,2,1.5,1.18,0.03,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","AATTCCACCAAAACAA",3,23.71,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13Y K87Y F99S R124L Q144H Q176L",6
"lib2","SARS-CoV-2","AATTCCACCCACAACA",5,91.96,10.38,-0.46,0.04,2.88,1.02,0,"1 nonsynonymous","P133D",1
"lib2","SARS-CoV-2","AATTCCACTCTAACAC",3,0.98,NA,NA,NA,NA,NA,NA,"stop","P7C E141*",2
"lib2","SARS-CoV-2","AATTCCACTTTGAATA",13,83.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58R V103L",2
"lib2","SARS-CoV-2","AATTCCAGAATACAGG",3,13.03,6,-4.84,1.71,1.5,1.02,0,">1 nonsynonymous","S19L D90L",2
"lib2","SARS-CoV-2","AATTCCAGTCCTAGTA",12,144.97,10.71,-0.13,0.03,2.92,1.05,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","AATTCCAGTTAATACC",4,57.37,8.93,-1.91,0.07,2.83,1.11,0,">1 nonsynonymous","G117M K128S T148I",3
"lib2","SARS-CoV-2","AATTCCATCTTGACCT",1,8.66,10.72,-0.11,0.05,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTCCATGTTCGAAT",6,75.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6V L38P D90C N171C",4
"lib2","SARS-CoV-2","AATTCCATTCCCTATA",3,36.96,10.76,-0.07,0.04,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTCCATTGATTAGA",5,1.86,NA,NA,NA,NA,NA,NA,"stop","C6* S43M",2
"lib2","SARS-CoV-2","AATTCCCAAAGTTAGA",2,15.06,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","N13I F62A S113N Y121L N151C",5
"lib2","SARS-CoV-2","AATTCCCAATTGGAAG",1,5.92,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","G51I T140Q E154R F167A Q176L",5
"lib2","SARS-CoV-2","AATTCCCATTGAAGAA",4,15.22,10.26,-0.58,0.22,2.54,1,0.01,">1 nonsynonymous","N4P L95V N151I",3
"lib2","SARS-CoV-2","AATTCCCCCGTTTAGC",2,26.44,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","F70R",1
"lib2","SARS-CoV-2","AATTCCCCTGTACTAA",1,5.27,9.36,-1.47,0.26,2,1.09,0.01,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","AATTCCCGACAAGTAG",1,51.91,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A67G R127T R136M Y178V",4
"lib2","SARS-CoV-2","AATTCCCGGAAAAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","N13A K26* N107*",3
"lib2","SARS-CoV-2","AATTCCCGGATTGCGC",12,99.23,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","S129C V182K",2
"lib2","SARS-CoV-2","AATTCCCTGCAGCTAA",1,54.91,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","R73T A105R K132F F167V",4
"lib2","SARS-CoV-2","AATTCCCTGCCTGCTG",7,1.37,NA,NA,NA,NA,NA,NA,"stop","C31F C61L I80V K114S K128* R136S",6
"lib2","SARS-CoV-2","AATTCCGAAAGATATA",2,27.71,10.22,-0.61,0.08,2.78,1.12,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","AATTCCGACATATAAG",3,14.27,6,-4.84,1.87,3,1.06,0,">1 nonsynonymous","F12E S53F D97A N118G R136I",5
"lib2","SARS-CoV-2","AATTCCGCACACGATA",4,13.14,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","A33D P96I I138T",3
"lib2","SARS-CoV-2","AATTCCGCCCCGGTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87G P161T",2
"lib2","SARS-CoV-2","AATTCCGGGAATACGT",6,60.23,9.54,-1.29,0.11,1.77,1.06,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","AATTCCGGGTTTCTGT",1,24.07,6,-4.84,1.88,1.5,1.13,0.01,">1 nonsynonymous","V52G N58F K128E T140S N157T",5
"lib2","SARS-CoV-2","AATTCCGTACCTGTAA",8,62.95,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A14V N40A Y50S A105R S113A N118F Y121C G146R",8
"lib2","SARS-CoV-2","AATTCCTATACGAAAG",5,25.22,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R16A N92D A105L I142Q G174V",5
"lib2","SARS-CoV-2","AATTCCTATGTGGTAA",6,71.64,10.86,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTCCTCATAAATTC",8,2.26,NA,NA,NA,NA,NA,NA,"stop","W106T L131M I138* V180E",4
"lib2","SARS-CoV-2","AATTCCTGCCTAAAGC",5,142.35,10.64,-0.2,0.05,2.92,1.08,0,"1 nonsynonymous","D59W",1
"lib2","SARS-CoV-2","AATTCCTGCTCTCGTC",2,8.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N13A V52Q G83Y Y91I",4
"lib2","SARS-CoV-2","AATTCGACAATACGGG",10,45.77,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","G9H V20L S29T L57Q S200L",5
"lib2","SARS-CoV-2","AATTCGACATGCGGTT",3,31.23,8.54,-2.29,0.11,2.33,1.08,0,">1 nonsynonymous","S36T G51S T55S Y119A P149V T201L",6
"lib2","SARS-CoV-2","AATTCGAGCATTCTCA",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V N151P",2
"lib2","SARS-CoV-2","AATTCGAGCCACTAAT",3,26.17,10.62,-0.22,0.08,2.83,1.02,0,"1 nonsynonymous","D59I",1
"lib2","SARS-CoV-2","AATTCGATATTAAAAT",1,5.36,9.5,-1.33,0.54,1.5,1.16,0.06,"1 nonsynonymous","P96F",1
"lib2","SARS-CoV-2","AATTCGATCATGCCAC",9,82.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6V N109S K132N P161H",4
"lib2","SARS-CoV-2","AATTCGATTGCGACAT",5,38.92,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L57D V103H Y119V E135R",4
"lib2","SARS-CoV-2","AATTCGCAAAACCTCG",4,0,NA,NA,NA,NA,NA,NA,"stop","L60Q C150*",2
"lib2","SARS-CoV-2","AATTCGCCCTGATTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A N107Q D112C T201F",4
"lib2","SARS-CoV-2","AATTCGCCGCCTATTG",1,41.76,9.61,-1.22,0.08,2.77,1.02,0,">1 nonsynonymous","T100L N120R Q144Y A192T",4
"lib2","SARS-CoV-2","AATTCGCGAGTGGACT",6,89.54,10.13,-0.71,0.05,2.62,1,0,"1 nonsynonymous","Q79T",1
"lib2","SARS-CoV-2","AATTCGGAACTCCGCG",15,69.29,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y50T I80M D97F S129V T170I",5
"lib2","SARS-CoV-2","AATTCGGAATTGGAAA",2,29.52,8.59,-2.25,0.13,1.85,1,0.01,">1 nonsynonymous","N107A G155V S200L",3
"lib2","SARS-CoV-2","AATTCGGATGATCCGT",1,16.73,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","L57N K94V L125G T140I I142F",5
"lib2","SARS-CoV-2","AATTCGGGATCACCAA",7,2.41,NA,NA,NA,NA,NA,NA,"stop","L5T I80E D90L S113T N157S G174*",6
"lib2","SARS-CoV-2","AATTCGGGTCATGATA",5,1.45,NA,NA,NA,NA,NA,NA,"stop","S19* L162T",2
"lib2","SARS-CoV-2","AATTCGGTGATATTTA",2,56.52,9.01,-1.82,0.08,2.72,1.04,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","AATTCGGTGCGTAACC",4,0,NA,NA,NA,NA,NA,NA,"stop","V77A G116*",2
"lib2","SARS-CoV-2","AATTCGGTTATAACAC",9,133.62,10.63,-0.21,0.04,2.87,1.14,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","AATTCGTAAATTTTCC",14,140.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I88M L125R G146I",3
"lib2","SARS-CoV-2","AATTCGTAACAACACA",5,0.46,NA,NA,NA,NA,NA,NA,"stop","A14S R25F K114E K128*",4
"lib2","SARS-CoV-2","AATTCGTACACAAGGC",2,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V103E T201K",3
"lib2","SARS-CoV-2","AATTCGTAGCATTATA",5,32.97,9.44,-1.39,0.19,1.63,1.13,0.01,">1 nonsynonymous","Y35S G83V",2
"lib2","SARS-CoV-2","AATTCGTGTTTACAGG",3,60.56,10.09,-0.75,0.07,2.56,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTCGTTAAAATCTA",11,18.66,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N13L Y35R C49S K199Q",4
"lib2","SARS-CoV-2","AATTCGTTAATCGTAA",1,40.88,10.82,-0.01,0.08,2.83,1.19,0,">1 nonsynonymous","V37W K56T N64S N151E",4
"lib2","SARS-CoV-2","AATTCGTTACACATTC",8,52.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G51H N92A R136A",3
"lib2","SARS-CoV-2","AATTCTAAAACCGGAT",9,222.5,8.24,-2.6,0.1,2.39,1.07,0,">1 nonsynonymous","F62Y Q176T",2
"lib2","SARS-CoV-2","AATTCTAAAATTTAAA",13,94.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39L S69R I104T S139N Y178V",5
"lib2","SARS-CoV-2","AATTCTAAATTATCCT",6,137.32,8.91,-1.92,0.06,2.94,1.1,0,">1 nonsynonymous","I2R Y35L F156D",3
"lib2","SARS-CoV-2","AATTCTAACAGTGCAC",2,8.18,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","N64L Y91S D112M A145T L188R",5
"lib2","SARS-CoV-2","AATTCTAACTCTAACC",4,64.44,10.13,-0.71,0.06,2.79,1.09,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","AATTCTAATTTCACTT",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H K48L K132E",3
"lib2","SARS-CoV-2","AATTCTACAAAATTTC",4,66.07,9.95,-0.88,0.08,2.16,1.02,0,">1 nonsynonymous","L5M E10L F17W K94S L122M",5
"lib2","SARS-CoV-2","AATTCTACAACGCTTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y G101N P133L T140N T148V",5
"lib2","SARS-CoV-2","AATTCTACCAACCAGT",4,53.08,6,-4.84,1.35,1.5,1.12,0.03,">1 nonsynonymous","S29A Y39L G152L T170Y Q176M",5
"lib2","SARS-CoV-2","AATTCTACTTACAATG",3,2206.89,6,-4.84,1.44,1.5,1.15,0.01,">1 nonsynonymous","A81K F99I P197D",3
"lib2","SARS-CoV-2","AATTCTAGGCCGGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S29*",1
"lib2","SARS-CoV-2","AATTCTAGTCTGATCC",1,14.63,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F12S D68T W106E",3
"lib2","SARS-CoV-2","AATTCTATACCCCAAG",2,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D D98E L183S",3
"lib2","SARS-CoV-2","AATTCTATAGTCCTTG",5,0.33,NA,NA,NA,NA,NA,NA,"stop","Y91V N107* G146T",3
"lib2","SARS-CoV-2","AATTCTATATGGACGT",2,35.82,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","A33E G86F",2
"lib2","SARS-CoV-2","AATTCTCAGGACTTGA",3,44.46,8.37,-2.47,0.21,2.2,1.1,0.02,">1 nonsynonymous","I2N N157V",2
"lib2","SARS-CoV-2","AATTCTCAGTAACGCA",2,5.32,7.95,-2.88,0.41,1.5,1,0.04,">1 nonsynonymous","V103T S108T N120S P169R",4
"lib2","SARS-CoV-2","AATTCTCATAAGACAT",1,15.78,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37H K48M N64L Q168Y H189I",5
"lib2","SARS-CoV-2","AATTCTCCAAAGTGCA",8,22.45,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G101N Y119L",2
"lib2","SARS-CoV-2","AATTCTCCAATGGACT",5,193.7,10.8,-0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTCTCTAGTCTTTA",4,47.19,10.71,-0.13,0.04,2.87,1.14,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","AATTCTCTCGAGAATT",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I I88L L95I N118I",4
"lib2","SARS-CoV-2","AATTCTCTTTAGGCAA",5,48.03,6,-4.84,1.81,1.5,1.11,0.01,">1 nonsynonymous","I88F K94L",2
"lib2","SARS-CoV-2","AATTCTGACAATAATT",1,35.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P7F R16I S29R P96L Q144V",5
"lib2","SARS-CoV-2","AATTCTGATGAGAAAT",4,30.79,6,-4.84,2,1.5,1.19,0.05,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","AATTCTGATTGCGTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87D K198E",2
"lib2","SARS-CoV-2","AATTCTGATTTGAAAA",3,21.75,7.33,-3.51,0.42,1.5,1.07,0.06,">1 nonsynonymous","Q84W Y121H T140L V173C",4
"lib2","SARS-CoV-2","AATTCTGCAACCGCAT",3,64.24,9.65,-1.19,0.07,2.92,1.03,0,">1 nonsynonymous","S53Y G146T",2
"lib2","SARS-CoV-2","AATTCTGCTCAAATAA",1,10.85,9.14,-1.7,0.08,2.58,1.03,0,">1 nonsynonymous","T100N Y119I",2
"lib2","SARS-CoV-2","AATTCTGTGGACCTGA",10,311.28,10.8,-0.04,0.03,2.96,1.06,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","AATTCTTACACGATGC",2,1.43,NA,NA,NA,NA,NA,NA,"stop","E10A N110* Y123*",3
"lib2","SARS-CoV-2","AATTCTTACTGCAAAG",2,0.12,NA,NA,NA,NA,NA,NA,"stop","I28* L57S N157S",3
"lib2","SARS-CoV-2","AATTCTTGCCACTAAA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","T3V S19F V103G Q144* L187N",5
"lib2","SARS-CoV-2","AATTGAAAACGCTTAG",1,24.82,10.76,-0.07,0.07,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGAAACGCCTAAC",4,95.58,10.58,-0.25,0.05,2.94,1.08,0,">1 nonsynonymous","Q84S D90F",2
"lib2","SARS-CoV-2","AATTGAAACGGTAGAT",7,111.08,10.83,0,0.04,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGAAAGCCCACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y S53T A89K W106S K114W",5
"lib2","SARS-CoV-2","AATTGAAAGGAGGATA",2,31.26,10.12,-0.71,0.06,2.82,1.04,0,">1 nonsynonymous","T55A K128T P169F",3
"lib2","SARS-CoV-2","AATTGAAATAACAAAT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N13Q R127*",2
"lib2","SARS-CoV-2","AATTGAAATCAATCCA",10,5.88,NA,NA,NA,NA,NA,NA,"stop","N58C F99E P149* Q168R",4
"lib2","SARS-CoV-2","AATTGAAATGCATATA",1,30.63,10.37,-0.46,0.05,2.84,1.14,0,">1 nonsynonymous","F12V V37L",2
"lib2","SARS-CoV-2","AATTGAACAGACCGAG",2,69.13,10.82,-0.02,0.05,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AATTGAACATATACGA",18,286.33,10.68,-0.15,0.02,2.94,1.06,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","AATTGAACATCTCTAT",3,75.61,10.19,-0.65,0.04,3,1.04,0,">1 nonsynonymous","K56S Y91F Q168M",3
"lib2","SARS-CoV-2","AATTGAACCTAGGGGC",2,45.8,9.73,-1.1,0.09,2.03,1.07,0,">1 nonsynonymous","Y35R A105T N130I",3
"lib2","SARS-CoV-2","AATTGAACGCATTTGC",2,7.16,8.02,-2.82,0.39,2,1.26,0.05,">1 nonsynonymous","F44G A81M Y119A",3
"lib2","SARS-CoV-2","AATTGAACTGCAAAAA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M P96G Q176L",3
"lib2","SARS-CoV-2","AATTGAAGCACAAAAA",4,25.83,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","L57S I104N G146V",3
"lib2","SARS-CoV-2","AATTGAAGCCCGAAAT",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T V77G I104K S147T P169V",5
"lib2","SARS-CoV-2","AATTGAAGGAACTATC",6,1.29,NA,NA,NA,NA,NA,NA,"stop","I2S S43I T170P K198*",4
"lib2","SARS-CoV-2","AATTGAAGGTTGACTA",4,97.45,10.84,0,0.05,2.93,1.06,0,">1 nonsynonymous","S129G V173M",2
"lib2","SARS-CoV-2","AATTGAAGTAATCGTG",5,79.34,7.74,-3.1,0.28,1.67,1.21,0.02,">1 nonsynonymous","N107H F126Y",2
"lib2","SARS-CoV-2","AATTGAATAAGTTGAC",22,315.09,10.76,-0.08,0.04,2.93,1.08,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AATTGAATTATAAGCC",3,53.26,10.67,-0.17,0.04,2.91,1.08,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","AATTGAATTATCATTA",1,97.81,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","F44L Y50S I138G",3
"lib2","SARS-CoV-2","AATTGAATTGTACCAG",3,24.89,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","T15A L95R I138V",3
"lib2","SARS-CoV-2","AATTGACACGTCCTGG",2,22.63,10.78,-0.06,0.08,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGACAGGGAATCC",3,25.82,9.34,-1.5,0.06,2.87,1.03,0,">1 nonsynonymous","L60T N171L",2
"lib2","SARS-CoV-2","AATTGACCCATCATCA",3,16.99,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","E10P Q84R Y119V C150F",4
"lib2","SARS-CoV-2","AATTGACCCGATTGCG",2,23.51,10.7,-0.14,0.1,2.96,1.06,0,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","AATTGACGACATCCTT",6,47.68,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","I88R T148A F156H K199H",4
"lib2","SARS-CoV-2","AATTGACGACATCTAC",8,126.43,10.41,-0.42,0.03,2.89,1.06,0,">1 nonsynonymous","F44G N110Y T201Y",3
"lib2","SARS-CoV-2","AATTGAGAACCACATA",4,55.3,10.83,-0.01,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGAGCAAGTCGAT",8,162.11,10.41,-0.43,0.04,2.9,1.04,0,">1 nonsynonymous","A42P C61Y G83Y",3
"lib2","SARS-CoV-2","AATTGAGCCCAGATAA",7,39.13,10.04,-0.8,0.1,2.34,1.1,0,"1 nonsynonymous","A81F",1
"lib2","SARS-CoV-2","AATTGAGCTAACACAA",6,33.55,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","K56A D90L I142T P149H L162G",5
"lib2","SARS-CoV-2","AATTGAGCTTTTAACG",8,102.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","AATTGAGGCTGTATGA",5,113.82,10.14,-0.69,0.07,2.35,1.07,0,">1 nonsynonymous","N4V P96D",2
"lib2","SARS-CoV-2","AATTGAGGGAATCACA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","T15N S129N E141* R179V",4
"lib2","SARS-CoV-2","AATTGAGGGCCAGGAG",2,73.97,8.01,-2.82,0.32,1.5,1,0.04,">1 nonsynonymous","G83N A89D",2
"lib2","SARS-CoV-2","AATTGAGTAGAACTAA",14,42.56,7.85,-2.99,0.33,1.5,1.07,0.04,">1 nonsynonymous","T55P F99V K128G",3
"lib2","SARS-CoV-2","AATTGAGTATTCCAAC",4,111.48,9.66,-1.18,0.08,2.37,1.02,0,">1 nonsynonymous","C6Y I28W A42M",3
"lib2","SARS-CoV-2","AATTGAGTGGATCCTT",18,1144.18,10.57,-0.27,0.02,2.86,1.07,0,">1 nonsynonymous","A33Y A81S",2
"lib2","SARS-CoV-2","AATTGATAATCATATT",1,11.3,8.35,-2.49,0.14,2.83,1,0.01,">1 nonsynonymous","E141L G152M T170H",3
"lib2","SARS-CoV-2","AATTGATACAGAACGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H K26G P82M A89M P96V W106M",6
"lib2","SARS-CoV-2","AATTGATATAACTATA",4,145.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5E F12P Q176L",3
"lib2","SARS-CoV-2","AATTGATATTAGTAGA",4,42.9,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","C61L F99P L131A T201L",4
"lib2","SARS-CoV-2","AATTGATATTGCACTA",8,35.5,6,-4.84,2,3,1.21,0,">1 nonsynonymous","S19H F99P G116W",3
"lib2","SARS-CoV-2","AATTGATCATGTAAAA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","D112L G117L G172W S184*",4
"lib2","SARS-CoV-2","AATTGATCCTAAGAAT",5,59.03,7.94,-2.89,0.36,1.5,1.08,0.03,">1 nonsynonymous","F8S K48N K87G",3
"lib2","SARS-CoV-2","AATTGATGCCAGCTAC",5,46.87,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","Y35A D90F R124K",3
"lib2","SARS-CoV-2","AATTGATGCCTATCCA",3,128.52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D34G G172S",2
"lib2","SARS-CoV-2","AATTGATGCTTACTAA",3,47.9,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P82L R127G Y178N",3
"lib2","SARS-CoV-2","AATTGATGGTGTACAG",2,70.91,10.77,-0.06,0.05,2.95,1.08,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","AATTGATTACATTAAA",5,53.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2F N92K N120M",3
"lib2","SARS-CoV-2","AATTGATTACCCCTGG",11,71.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17E Q84K T140P Q168D",4
"lib2","SARS-CoV-2","AATTGATTATGACTTT",16,73.46,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y21G K56P Y119W T170C",4
"lib2","SARS-CoV-2","AATTGATTGGAAGTAT",2,42.12,10.07,-0.76,0.08,2.5,1.08,0,"1 nonsynonymous","V71M",1
"lib2","SARS-CoV-2","AATTGATTTACAGAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K Y91P S113L",3
"lib2","SARS-CoV-2","AATTGCAAAGGACAGA",9,68.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29V Q79P",2
"lib2","SARS-CoV-2","AATTGCAACACACGAT",1,16.35,6.65,-4.18,0.51,1.5,1.04,0.04,">1 nonsynonymous","K56L C150M K198T",3
"lib2","SARS-CoV-2","AATTGCAAGCTAACTG",4,154.39,10.75,-0.09,0.07,2.82,1.16,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","AATTGCAATCCGAATG",2,15.47,8.7,-2.14,0.09,2.87,1.18,0,"1 nonsynonymous","T170V",1
"lib2","SARS-CoV-2","AATTGCACACAAGCTA",2,18.83,8.29,-2.55,0.19,1.96,1.06,0.01,"1 nonsynonymous","Y121D",1
"lib2","SARS-CoV-2","AATTGCACCACGGCGA",4,91.22,10.83,0,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGCACCTTTACGT",5,25.88,9.84,-1,0.09,2.41,1,0,">1 nonsynonymous","C102L K128P P149Q K198N",4
"lib2","SARS-CoV-2","AATTGCATAGACTTCA",9,2.16,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","AATTGCATCCCGCCCC",2,28.83,10.92,0.08,0.2,2.75,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATTGCATGAGAGACA",2,31,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2N P149S R179Y S200L",4
"lib2","SARS-CoV-2","AATTGCCACTAAAAAC",7,2.11,NA,NA,NA,NA,NA,NA,"stop","T55K T63I K128I Y178*",4
"lib2","SARS-CoV-2","AATTGCCAGTAAAAGA",4,33.52,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","V103T F126V N157F",3
"lib2","SARS-CoV-2","AATTGCCATATGTATC",2,31.62,8.24,-2.6,0.21,1.66,1.03,0.02,">1 nonsynonymous","Y35N I142N",2
"lib2","SARS-CoV-2","AATTGCCCAAAACAAA",7,60.91,10.9,0.06,0.08,2.85,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGCCCAGTTCATG",4,23,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V52I V103S S139P",3
"lib2","SARS-CoV-2","AATTGCCCCGGTCCGA",11,167.24,9.97,-0.86,0.08,2.42,1.08,0,">1 nonsynonymous","C6S T100Y L122S S129Y V173L S184C",6
"lib2","SARS-CoV-2","AATTGCCCTCCCTAGG",3,80.78,10.77,-0.06,0.05,2.95,1.07,0,">1 nonsynonymous","I28L Y35L L60Y V173D",4
"lib2","SARS-CoV-2","AATTGCCGGATCGGGG",1,83.9,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A42E Q84K L122P C150S",4
"lib2","SARS-CoV-2","AATTGCCTATCTGGCG",4,24.81,6,-4.84,1.83,3,1.22,0.01,">1 nonsynonymous","C61N I104K S129G Y165K",4
"lib2","SARS-CoV-2","AATTGCGAAAAGTCAC",8,125.64,10.39,-0.45,0.03,2.95,1.07,0,">1 nonsynonymous","Y39L K56S K87V I104L N151V",5
"lib2","SARS-CoV-2","AATTGCGCCAGCTATT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","L5K A81* G83L F160A G172L T201I",6
"lib2","SARS-CoV-2","AATTGCGCGATATGAT",4,40.71,9.58,-1.26,0.11,1.9,1.1,0.01,">1 nonsynonymous","R27L N64I P133M",3
"lib2","SARS-CoV-2","AATTGCGTACGTAAAA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K G74S T85Y Y119Q",4
"lib2","SARS-CoV-2","AATTGCTAGGGGCGAA",8,1.58,NA,NA,NA,NA,NA,NA,"stop","N13F C31M P54R G83Y T100* H189R",6
"lib2","SARS-CoV-2","AATTGCTTAAAGCCGT",10,89.21,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6G V11D R25Q D90S",4
"lib2","SARS-CoV-2","AATTGGAAATCTGACC",2,33.59,10.13,-0.7,0.14,2.23,1.04,0.01,">1 nonsynonymous","A89Y T201N",2
"lib2","SARS-CoV-2","AATTGGAAATTACCAA",4,11.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G86K R136I",2
"lib2","SARS-CoV-2","AATTGGAACGAATACC",3,95,8.54,-2.3,0.14,1.84,1.12,0.01,">1 nonsynonymous","V11I R27S A105F G174T A190S",5
"lib2","SARS-CoV-2","AATTGGAAGTACCAGA",6,70.23,6,-4.84,1.25,1.5,1.16,0.01,">1 nonsynonymous","I2L P7L A105L N118V",4
"lib2","SARS-CoV-2","AATTGGACAAGTTGCA",4,60.57,9.41,-1.43,0.13,1.92,1.05,0.01,">1 nonsynonymous","A81S A105I",2
"lib2","SARS-CoV-2","AATTGGATACGCCCAA",4,20.29,10.85,0.01,0.1,2.81,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AATTGGATATGACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7L W23* F47H F70E D90G",5
"lib2","SARS-CoV-2","AATTGGATGGCCGCGA",2,23.22,10.16,-0.67,0.1,2.61,1.02,0.01,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AATTGGCAAACCTTAG",6,67.6,10.36,-0.47,0.04,2.92,1.08,0,">1 nonsynonymous","C6D L188V",2
"lib2","SARS-CoV-2","AATTGGCAAGCTACAC",6,83.86,10.67,-0.16,0.05,2.89,1.12,0,">1 nonsynonymous","A42R V103I",2
"lib2","SARS-CoV-2","AATTGGCACGAACCTT",12,71.64,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F167V V180F",2
"lib2","SARS-CoV-2","AATTGGCAGGCGTATA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","C6* F44C I138F",3
"lib2","SARS-CoV-2","AATTGGCCAGTATTGG",3,0.47,NA,NA,NA,NA,NA,NA,"stop","S36* F47L E76T A105L F134R P169L",6
"lib2","SARS-CoV-2","AATTGGCCTGCTCCGT",5,109.28,6.04,-4.8,0.59,1.5,1.14,0.01,">1 nonsynonymous","S36G N120R Y178P",3
"lib2","SARS-CoV-2","AATTGGCGCAGATCCT",12,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","AATTGGCGTATATAAA",1,11.7,10.78,-0.06,0.11,2.86,1.13,0,"1 nonsynonymous","N130G",1
"lib2","SARS-CoV-2","AATTGGCTAGGCACCG",2,58.1,10.88,0.04,0.05,2.95,1.06,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","AATTGGCTTAAAGGAA",3,35.96,9.28,-1.56,0.04,2.96,1.08,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","AATTGGGAAAGAAAGT",2,21.38,10.37,-0.46,0.16,2.63,1.23,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AATTGGGAACATTTAT",1,8.31,10.2,-0.63,0.17,2.84,1,0.01,">1 nonsynonymous","I2D K94Q",2
"lib2","SARS-CoV-2","AATTGGGACTCTGCAT",2,40.48,10.16,-0.68,0.05,2.91,1.07,0,"1 nonsynonymous","G166S",1
"lib2","SARS-CoV-2","AATTGGGAGATGTAAT",3,60.52,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V20P N118L V153M Y175N",4
"lib2","SARS-CoV-2","AATTGGTACTATCAAA",11,6.83,NA,NA,NA,NA,NA,NA,"stop","V20M F99* Q168I",3
"lib2","SARS-CoV-2","AATTGGTATTGGTATC",7,204.41,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F62M G86M N92T",3
"lib2","SARS-CoV-2","AATTGGTCTACAACAT",4,85.02,6.41,-4.43,0.36,1.5,1.15,0.01,">1 nonsynonymous","G86D N120H Q144R",3
"lib2","SARS-CoV-2","AATTGTAAAAAGTAAA",1,74.51,10.4,-0.44,0.04,2.88,1.03,0,">1 nonsynonymous","R27P A42T F160A G196V T201K",5
"lib2","SARS-CoV-2","AATTGTAACAGCAAAA",13,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K C61S L183R",3
"lib2","SARS-CoV-2","AATTGTAAGACGGTTG",11,0.51,NA,NA,NA,NA,NA,NA,"stop","L5R K128D T201*",3
"lib2","SARS-CoV-2","AATTGTAATCTTACCG",3,30.5,6.09,-4.74,0.99,1.5,1.24,0.02,">1 nonsynonymous","S41G T46S Y121W R136M Q163E",5
"lib2","SARS-CoV-2","AATTGTAATGAGACAA",2,159.16,9.12,-1.71,0.04,2.94,1.03,0,">1 nonsynonymous","I2R Y119V S184I",3
"lib2","SARS-CoV-2","AATTGTAGCAAAAACT",2,2.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102T",1
"lib2","SARS-CoV-2","AATTGTAGCTGTATTC",5,65.49,11.08,0.25,0.06,3,1,0,">1 nonsynonymous","Y35F Y123K",2
"lib2","SARS-CoV-2","AATTGTATAGGGTTAG",13,101.18,10.56,-0.28,0.03,2.94,1.05,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","AATTGTATCAACGAAT",5,1.45,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib2","SARS-CoV-2","AATTGTATCAGACACT",4,0.85,NA,NA,NA,NA,NA,NA,"stop","Y35A K87C T100* G146* T201L",5
"lib2","SARS-CoV-2","AATTGTATCTCCCCAG",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H P96L E186S",3
"lib2","SARS-CoV-2","AATTGTATTATGGTTC",7,33.67,8.8,-2.03,0.21,1.51,1.05,0.03,">1 nonsynonymous","G9W S69K E154Q",3
"lib2","SARS-CoV-2","AATTGTCAACTAAGGC",2,39.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F17K V52S R73D D90N N118T H189I",6
"lib2","SARS-CoV-2","AATTGTCACTATCAAA",7,83.93,10.67,-0.17,0.04,2.97,1.05,0,"1 nonsynonymous","D59C",1
"lib2","SARS-CoV-2","AATTGTCCATTTCTTA",8,97.44,10.96,0.12,0.06,2.94,1.07,0,">1 nonsynonymous","N1L Y35W I138T",3
"lib2","SARS-CoV-2","AATTGTCCCAATTGTC",12,141.8,10.4,-0.44,0.04,2.88,1.07,0,"1 nonsynonymous","N13Y",1
"lib2","SARS-CoV-2","AATTGTCCGCAACTCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","AATTGTCCGCTTTAAA",2,50.73,10.71,-0.12,0.04,2.94,1.04,0,">1 nonsynonymous","K56T G83F",2
"lib2","SARS-CoV-2","AATTGTCTACGTTCGT",6,0.02,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","AATTGTCTGCCCAAAT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","S29* L95H K114L Y121V K128M",5
"lib2","SARS-CoV-2","AATTGTCTGGATTAAG",7,130.22,10.83,0,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGTGAAAAAAATA",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K G86S V115S Y143I",4
"lib2","SARS-CoV-2","AATTGTGAAATCGGTA",3,12.85,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F70A S113V",2
"lib2","SARS-CoV-2","AATTGTGAAATCTTTT",4,129.18,10.19,-0.65,0.05,2.84,1.04,0,">1 nonsynonymous","L60V Y178V",2
"lib2","SARS-CoV-2","AATTGTGACTCCAATA",2,64.29,9.37,-1.47,0.09,2.76,1.07,0,">1 nonsynonymous","N1L F126V S129R F160T",4
"lib2","SARS-CoV-2","AATTGTGAGAACCCAA",10,2.26,NA,NA,NA,NA,NA,NA,"stop","D97N W106* P133S",3
"lib2","SARS-CoV-2","AATTGTGAGCGAAATG",4,72.82,10.42,-0.41,0.04,2.89,1.09,0,"1 nonsynonymous","N13A",1
"lib2","SARS-CoV-2","AATTGTGCAGATAACT",4,149.29,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2L S41T E141C Q163G G172A P177L",6
"lib2","SARS-CoV-2","AATTGTGCTAGCACGC",1,178.87,10.78,-0.06,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTGTGCTAGCGTAA",2,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40G T55I K94I N130A E141Q V180K",6
"lib2","SARS-CoV-2","AATTGTGCTATTCCCT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","T46L D98A Y119* K128H T201Q",5
"lib2","SARS-CoV-2","AATTGTGGAAACCTAA",7,0.73,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","AATTGTGGAGTTGGCG",1,50.89,9.43,-1.4,0.05,2.97,1.03,0,"1 nonsynonymous","E154F",1
"lib2","SARS-CoV-2","AATTGTGGGTCTGTCT",1,49.75,10.09,-0.75,0.08,2.92,1.05,0,">1 nonsynonymous","G83F Y119R",2
"lib2","SARS-CoV-2","AATTGTTAACTCTAAA",2,25.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E10Y D98A L125C Q168I L188R",5
"lib2","SARS-CoV-2","AATTGTTAATTAATCA",2,23.58,9.32,-1.52,0.13,1.87,1.06,0.01,">1 nonsynonymous","S45L Y91N",2
"lib2","SARS-CoV-2","AATTGTTAGATATGGG",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V P96I F156D",3
"lib2","SARS-CoV-2","AATTGTTCAACATAGC",10,167.59,10.33,-0.51,0.05,2.95,1.02,0,">1 nonsynonymous","I2V N58V A190W T201K",4
"lib2","SARS-CoV-2","AATTGTTCACACGCCA",8,149.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A145V P177I",2
"lib2","SARS-CoV-2","AATTGTTTATAGCGAG",8,27.08,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S19P L95R K132A",3
"lib2","SARS-CoV-2","AATTTAAAAATCAAAT",5,69.01,7.87,-2.97,0.27,1.5,1.06,0.02,">1 nonsynonymous","N107W K198T",2
"lib2","SARS-CoV-2","AATTTAAAATAATAGA",2,33.87,10.03,-0.8,0.07,2.86,1.01,0,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","AATTTAAACAGACTAA",8,37.47,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","D90W G101R Y143K",3
"lib2","SARS-CoV-2","AATTTAAACGTGATTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","P96R Q168V T201*",3
"lib2","SARS-CoV-2","AATTTAAACTTCCCCA",1,36.14,10.38,-0.46,0.06,3,1.01,0,">1 nonsynonymous","C61N G116L K198G",3
"lib2","SARS-CoV-2","AATTTAAAGAGCAGCC",1,14.68,10.7,-0.14,0.09,2.88,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTAAAGTGCTATT",4,52.43,9.46,-1.38,0.1,2.37,1.02,0,">1 nonsynonymous","T3D F17S R78E",3
"lib2","SARS-CoV-2","AATTTAAATAAAGAAT",4,27.09,6.27,-4.56,0.59,1.5,1.14,0.01,">1 nonsynonymous","T63I P96L",2
"lib2","SARS-CoV-2","AATTTAAATAACTATA",6,58.77,9.03,-1.81,0.14,1.59,1.05,0.01,"1 nonsynonymous","G86E",1
"lib2","SARS-CoV-2","AATTTAAATATGAGAC",12,225.31,9.7,-1.14,0.06,2.47,1.07,0,">1 nonsynonymous","F12V G152C",2
"lib2","SARS-CoV-2","AATTTAAATATTGTCC",9,39.58,6.11,-4.73,0.59,1.5,1.13,0.01,">1 nonsynonymous","A14W K56F D98N V103N A145R S184F",6
"lib2","SARS-CoV-2","AATTTAAATTCAATGA",1,18.46,6.57,-4.26,0.42,1.5,1.11,0.02,">1 nonsynonymous","D97C R127E",2
"lib2","SARS-CoV-2","AATTTAAATTTACAGC",16,0.5,NA,NA,NA,NA,NA,NA,"stop","T15Y Y50S D98F V153R K199*",5
"lib2","SARS-CoV-2","AATTTAACACATGAAA",2,7.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G155Y Y165L",2
"lib2","SARS-CoV-2","AATTTAACAGCATAGT",4,46.03,6,-4.84,1.72,1.5,1.13,0.02,">1 nonsynonymous","L5I F17C S29T N64Y G101L S113L I142L G155W G166Y",9
"lib2","SARS-CoV-2","AATTTAACGAGGAAAT",7,104.92,6.15,-4.68,0.5,1.5,1.13,0.01,"1 nonsynonymous","C158D",1
"lib2","SARS-CoV-2","AATTTAAGAACTTTGC",5,48.78,10.72,-0.12,0.04,2.9,1.05,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","AATTTAAGATCCAACA",2,9.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17Q N64L",2
"lib2","SARS-CoV-2","AATTTAAGATGGTGAA",5,2.51,NA,NA,NA,NA,NA,NA,"stop","T3M P7V N92* D98V Y121P G152V S164Y S184D",8
"lib2","SARS-CoV-2","AATTTAAGCTAAAACC",2,6.77,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V103N T140W K198G",3
"lib2","SARS-CoV-2","AATTTAAGGCTAAAAA",13,86.05,6,-4.84,1.51,1.5,1.29,0.02,">1 nonsynonymous","V103A K128E S164C",3
"lib2","SARS-CoV-2","AATTTAAGGTTAGTGA",4,11.76,10.72,-0.11,0.08,2.9,1.13,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","AATTTAAGTCTATAGT",7,80.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L P82G P149N",3
"lib2","SARS-CoV-2","AATTTAATAACAAAAC",16,61,8.02,-2.81,0.1,1.94,1.12,0,">1 nonsynonymous","N58W D98S E154D Q168T",4
"lib2","SARS-CoV-2","AATTTAATAACCAAAC",2,70.81,9.07,-1.77,0.17,1.5,1.06,0.01,">1 nonsynonymous","P82R L122V",2
"lib2","SARS-CoV-2","AATTTAATAATCGCAA",24,221.04,9.2,-1.63,0.05,2.92,1.14,0,">1 nonsynonymous","Y119E S129N",2
"lib2","SARS-CoV-2","AATTTAATACAACTCT",1,19.77,6,-4.84,2,3,1.22,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","AATTTAATACAGGAGT",10,159.88,7.54,-3.29,0.21,1.5,1.07,0.01,">1 nonsynonymous","R16S N110K G117P G146Y",4
"lib2","SARS-CoV-2","AATTTAATATCTCCAC",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Y V103I F126A S147E V182Q",5
"lib2","SARS-CoV-2","AATTTAATCAAATTGA",3,9.75,10.63,-0.21,0.13,2.84,1.1,0.01,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","AATTTAATCTAAAATG",2,23.24,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V77M K94S D98Y S184M",4
"lib2","SARS-CoV-2","AATTTAATCTATTAAG",4,1.01,NA,NA,NA,NA,NA,NA,"stop","S19F N30* V37A V52I R78S K114S",6
"lib2","SARS-CoV-2","AATTTAATGTCTCACA",7,74,9.74,-1.1,0.09,2.29,1.06,0,">1 nonsynonymous","S53V D90S F134E",3
"lib2","SARS-CoV-2","AATTTAATTCTTCCAA",6,0.12,NA,NA,NA,NA,NA,NA,"stop","S36* N130R P149I",3
"lib2","SARS-CoV-2","AATTTAATTGTGACCA",10,63.41,10.87,0.04,0.07,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTACAAGCATACG",2,9.99,7.19,-3.64,0.25,1.5,1.02,0.03,">1 nonsynonymous","N4T S19V S43H R73S",4
"lib2","SARS-CoV-2","AATTTACAAGGCCGTT",3,6.82,NA,NA,NA,NA,NA,NA,"stop","K26* S41Q I104N D112R A145T",5
"lib2","SARS-CoV-2","AATTTACAATAACACC",3,18.27,6.62,-4.21,0.49,1.5,1.07,0.03,">1 nonsynonymous","C6S S113R",2
"lib2","SARS-CoV-2","AATTTACACAGGAATT",2,38.71,10.89,0.05,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTACAGGATCGAC",11,110.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V71L D137S G146L T148N T201M",5
"lib2","SARS-CoV-2","AATTTACATACCTCGG",3,14.16,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A33D G83F D112R N130I D137G",5
"lib2","SARS-CoV-2","AATTTACCGGTTAAAT",4,11.82,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","P133R P161K",2
"lib2","SARS-CoV-2","AATTTACCTCAAGCAA",2,69.93,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K26I K48P P82Q L95A F167R",5
"lib2","SARS-CoV-2","AATTTACCTCACTAGG",8,53.54,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N4F A42Q C61M R78W G83H Y143R",6
"lib2","SARS-CoV-2","AATTTACCTCGACCAT",6,32.4,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Q84L F99Y N157H",3
"lib2","SARS-CoV-2","AATTTACGATGCCTTT",19,299.3,10.11,-0.72,0.02,2.87,1.05,0,">1 nonsynonymous","Y121F S129A P149C K199L",4
"lib2","SARS-CoV-2","AATTTACTAAACACGG",8,32.6,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G51A N64G G101H S113K K128I R136C",6
"lib2","SARS-CoV-2","AATTTACTAAATGGAT",13,205.14,10.86,0.02,0.04,2.92,1.08,0,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","AATTTACTAGACACCA",2,27.34,9.98,-0.86,0.06,2.3,1.02,0,">1 nonsynonymous","V32I T63D V180L",3
"lib2","SARS-CoV-2","AATTTACTATCAACGT",5,18.54,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S43W C61F I104S P133S N151C Y159H Q168I",7
"lib2","SARS-CoV-2","AATTTACTGAAAACTT",3,70.82,10.8,-0.04,0.05,2.94,1.08,0,"1 nonsynonymous","G83N",1
"lib2","SARS-CoV-2","AATTTACTGACTTATG",16,42.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y P96L Q163D V180G",4
"lib2","SARS-CoV-2","AATTTAGAATTCCCTC",2,51.99,8.84,-2,0.08,3,1.06,0,">1 nonsynonymous","G116A Q168L",2
"lib2","SARS-CoV-2","AATTTAGACGCGACGA",3,27.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40T V52T R136G G152L Q163N",5
"lib2","SARS-CoV-2","AATTTAGATAGTAGAA",9,151.75,9.42,-1.42,0.09,2.26,1.14,0,">1 nonsynonymous","L5V R16K D90V G155S",4
"lib2","SARS-CoV-2","AATTTAGATATGAATA",5,43.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S41R D98F L111P Y165S",4
"lib2","SARS-CoV-2","AATTTAGCAAGATACT",2,15.86,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A89S C150T",2
"lib2","SARS-CoV-2","AATTTAGCCGTACATT",17,205.08,9.34,-1.5,0.04,2.89,1.12,0,">1 nonsynonymous","Y39F G117M",2
"lib2","SARS-CoV-2","AATTTAGCTTAAAAAA",3,69.41,10.58,-0.25,0.04,2.95,1.06,0,">1 nonsynonymous","T63I P149K",2
"lib2","SARS-CoV-2","AATTTAGGCAGAATAA",1,33.52,10.36,-0.48,0.08,2.92,1.08,0,"1 nonsynonymous","T46A",1
"lib2","SARS-CoV-2","AATTTAGGCTCCCCCC",1,27.73,9.69,-1.15,0.14,2,1,0.01,">1 nonsynonymous","F8L T100I Y123L P133V",4
"lib2","SARS-CoV-2","AATTTAGTAACCTTAT",4,36.69,8.29,-2.55,0.11,1.97,1.1,0.01,">1 nonsynonymous","D90S N107V",2
"lib2","SARS-CoV-2","AATTTAGTACAAACAT",4,15.8,9.66,-1.18,0.32,1.5,1,0.05,">1 nonsynonymous","G51S F99Y S200R",3
"lib2","SARS-CoV-2","AATTTAGTCTAAATAA",8,74.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C61W D90V Y175G",3
"lib2","SARS-CoV-2","AATTTAGTTATAGCCA",11,88.21,7.29,-3.54,0.18,1.68,1.1,0.01,">1 nonsynonymous","C31K Y175S",2
"lib2","SARS-CoV-2","AATTTATAACAGTCAA",2,30.62,7.74,-3.1,0.22,1.5,1,0.02,">1 nonsynonymous","A18T D112N",2
"lib2","SARS-CoV-2","AATTTATAGCACGAAA",2,30.72,10.2,-0.64,0.05,2.95,1.06,0,">1 nonsynonymous","V37D T55S Y121I T201I",4
"lib2","SARS-CoV-2","AATTTATAGTAAGCAA",2,12.87,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","L38I F47I K94L I142Y",4
"lib2","SARS-CoV-2","AATTTATATAAAACAG",6,19.8,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V11S S41D Y50P D90H K114R E141L",6
"lib2","SARS-CoV-2","AATTTATCCGGTGCAA",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","AATTTATGACTGAACT",7,77.16,10.08,-0.75,0.08,2.7,1.05,0,">1 nonsynonymous","T55V A81V",2
"lib2","SARS-CoV-2","AATTTATTATTGATTC",3,24.62,9.47,-1.36,0.17,1.85,1.19,0.01,">1 nonsynonymous","S45F E186F",2
"lib2","SARS-CoV-2","AATTTATTCTTGAAAA",15,316.74,10.11,-0.73,0.05,2.68,1.03,0,">1 nonsynonymous","G51A G152S",2
"lib2","SARS-CoV-2","AATTTATTTTACCTAT",6,106.71,10.21,-0.63,0.05,2.78,1.02,0,">1 nonsynonymous","E10V K48V",2
"lib2","SARS-CoV-2","AATTTCAAAACACTAT",5,2.95,NA,NA,NA,NA,NA,NA,"stop","V32L D59V T100*",3
"lib2","SARS-CoV-2","AATTTCAAAGAGATGC",2,44.24,10.61,-0.23,0.07,2.88,1.08,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AATTTCAAATTTCAAC",3,87.11,10.24,-0.6,0.06,2.77,1.11,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","AATTTCAAGACACTGG",4,48.62,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T63I I88C S108M G116R G196W T201E",6
"lib2","SARS-CoV-2","AATTTCAAGACTTCCA",10,111.59,10.65,-0.19,0.03,2.91,1.09,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","AATTTCACAAAACGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S Y93A S113Q T170I",4
"lib2","SARS-CoV-2","AATTTCACCCGATTAG",5,46.21,10.83,-0.01,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTCACGTGCAATA",7,157.77,10.29,-0.55,0.03,2.93,1.04,0,">1 nonsynonymous","P7F K56S",2
"lib2","SARS-CoV-2","AATTTCACTGCTGTCG",9,130.7,10.64,-0.2,0.03,2.97,1.04,0,">1 nonsynonymous","C61R S69T D98N",3
"lib2","SARS-CoV-2","AATTTCAGAAATAACA",3,33.58,10.47,-0.37,0.08,2.9,1.06,0,"1 nonsynonymous","V65T",1
"lib2","SARS-CoV-2","AATTTCAGAAGAAGAC",4,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W V103P V182T",3
"lib2","SARS-CoV-2","AATTTCAGCGATAGAT",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H D59L F70L",3
"lib2","SARS-CoV-2","AATTTCAGGGCAGGCA",3,24.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N58P Y119V V182L",3
"lib2","SARS-CoV-2","AATTTCATAGTCTCTT",5,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80W Y121M E135F",3
"lib2","SARS-CoV-2","AATTTCATTGAAAAAA",2,18.25,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","Y39H G86S N151L H189F",4
"lib2","SARS-CoV-2","AATTTCCAAACATCCA",5,79.52,6.48,-4.35,0.44,1.5,1.14,0.02,">1 nonsynonymous","K94W I138T",2
"lib2","SARS-CoV-2","AATTTCCAGTATTGTA",2,36.84,6,-4.84,2,1.5,1.21,0.03,"1 nonsynonymous","I80E",1
"lib2","SARS-CoV-2","AATTTCCAGTTAACTG",5,0.53,NA,NA,NA,NA,NA,NA,"stop","I2F Y91*",2
"lib2","SARS-CoV-2","AATTTCCAGTTGTGTT",4,48.92,6,-4.84,1.37,3,1.2,0,">1 nonsynonymous","C49G G86K",2
"lib2","SARS-CoV-2","AATTTCCATACCGCAG",2,62.64,8.83,-2.01,0.12,2.72,1.2,0.01,">1 nonsynonymous","T63M V115M G146T",3
"lib2","SARS-CoV-2","AATTTCCGCGAGTATA",3,9.38,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I28T G51N R127G Y178E",4
"lib2","SARS-CoV-2","AATTTCCTAAGATCTT",5,116.37,9.95,-0.88,0.07,2.63,1.02,0,">1 nonsynonymous","I28C A105T",2
"lib2","SARS-CoV-2","AATTTCGAAGGTAGCA",6,56.91,10.24,-0.6,0.08,2.6,1.03,0,"1 nonsynonymous","D34I",1
"lib2","SARS-CoV-2","AATTTCGAATACACCA",14,96.04,6.17,-4.67,0.73,1.5,1.19,0.02,">1 nonsynonymous","I2M Q168M V182S G196S",4
"lib2","SARS-CoV-2","AATTTCGACCTTCAGC",2,52.42,9.58,-1.26,0.13,1.93,1.11,0.01,">1 nonsynonymous","C49L S147A",2
"lib2","SARS-CoV-2","AATTTCGACGCCATTA",13,254.2,10.79,-0.04,0.03,2.93,1.03,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","AATTTCGTAATCACTT",7,0.02,NA,NA,NA,NA,NA,NA,"stop","A42* D68C",2
"lib2","SARS-CoV-2","AATTTCTAAACTAGGC",10,149.19,9.29,-1.54,0.05,1.87,1.07,0,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","AATTTCTATGTAAATG",3,23.52,8.9,-1.94,0.35,1.5,1.05,0.06,">1 nonsynonymous","K56M R127C",2
"lib2","SARS-CoV-2","AATTTCTCAAGTTCAT",14,70.69,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E10K G86N L95R",3
"lib2","SARS-CoV-2","AATTTCTCGGCTAGAA",1,25.76,7.55,-3.28,0.32,1.5,1.11,0.03,">1 nonsynonymous","C61M L95T Y119R T140R",4
"lib2","SARS-CoV-2","AATTTCTCTCAACAGG",3,8.27,10.26,-0.57,0.08,3,1,0,">1 nonsynonymous","N4K G174R",2
"lib2","SARS-CoV-2","AATTTCTGAGCACTCT",12,308.8,6,-4.84,0.58,1.5,1.11,0,">1 nonsynonymous","C6W G83H N120V Y175N",4
"lib2","SARS-CoV-2","AATTTCTGGGCTCCCA",12,132.98,10.17,-0.67,0.05,2.86,1.06,0,">1 nonsynonymous","L5M N107A",2
"lib2","SARS-CoV-2","AATTTGAACCCGAACA",14,155.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I88Q Y123N N130G",3
"lib2","SARS-CoV-2","AATTTGAACGTGAACA",6,41.52,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","K56E Y93L F99D R136S Q144W P161Y",6
"lib2","SARS-CoV-2","AATTTGAATAACGAAA",1,31.88,6.75,-4.08,0.29,1.5,1.09,0.01,">1 nonsynonymous","S113R F134R",2
"lib2","SARS-CoV-2","AATTTGAATGATAAAC",3,0.23,NA,NA,NA,NA,NA,NA,"stop","Y35* G146D C158M",3
"lib2","SARS-CoV-2","AATTTGACATGAAACT",8,75.2,10.34,-0.49,0.04,2.91,1.02,0,"1 nonsynonymous","N40V",1
"lib2","SARS-CoV-2","AATTTGAGCCGGACTA",2,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46F R127S",2
"lib2","SARS-CoV-2","AATTTGAGCTAAGATC",2,31.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4S C49H K94F A105M V194I",5
"lib2","SARS-CoV-2","AATTTGAGCTACAGGC",1,51.14,9.13,-1.7,0.16,1.76,1.1,0.01,">1 nonsynonymous","S19K K48N I142L",3
"lib2","SARS-CoV-2","AATTTGATGAGTCCGA",4,24.61,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C31N F44L T55D V77T P96C P191T",6
"lib2","SARS-CoV-2","AATTTGATGTGTAACG",7,120.39,10.43,-0.4,0.03,2.98,1.04,0,">1 nonsynonymous","A33S Y175F P197A",3
"lib2","SARS-CoV-2","AATTTGATTCTCGAAA",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y W106E",2
"lib2","SARS-CoV-2","AATTTGATTTTTTTCA",3,2.8,NA,NA,NA,NA,NA,NA,"stop","V20E S45G L60R A89*",4
"lib2","SARS-CoV-2","AATTTGCATTAGAGGT",10,41.05,8.55,-2.29,0.24,1.78,1.14,0.01,">1 nonsynonymous","C6D N58S F134D P191K K199H",5
"lib2","SARS-CoV-2","AATTTGCCAGAGCAAA",5,34.07,9.09,-1.74,0.12,1.95,1.08,0.01,">1 nonsynonymous","F8I F44C L122N E154K A190H",5
"lib2","SARS-CoV-2","AATTTGCCTAAACTAA",3,0.12,NA,NA,NA,NA,NA,NA,"stop","S41* K94Y N107L N120A",4
"lib2","SARS-CoV-2","AATTTGCCTTTTGAAC",2,10.2,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V103A W106S",2
"lib2","SARS-CoV-2","AATTTGCTCCAGTCTC",1,7.83,6,-4.84,2,3,1.03,0,">1 nonsynonymous","G83Y F99S S113I Y178K",4
"lib2","SARS-CoV-2","AATTTGCTCCATGACA",1,27.86,6.13,-4.71,0.99,1.5,1.16,0.03,">1 nonsynonymous","G9L S36E F99M A105F S129N",5
"lib2","SARS-CoV-2","AATTTGCTGTGAAAAC",1,15.46,10.53,-0.31,0.06,2.89,1.09,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","AATTTGGACCAACTAT",7,135.54,10.14,-0.69,0.04,2.78,1.07,0,">1 nonsynonymous","T3P N24R K56P",3
"lib2","SARS-CoV-2","AATTTGGCTCAATCGT",1,11.52,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23Q P54S",2
"lib2","SARS-CoV-2","AATTTGGGGCTCATCG",1,25.66,10.73,-0.11,0.09,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTGGTATCTCAAT",9,197.45,9.47,-1.37,0.05,2.88,1.05,0,">1 nonsynonymous","E10T A42V L125P",3
"lib2","SARS-CoV-2","AATTTGGTCCACCTAA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","L5R Y35L C49N K56* L95G",5
"lib2","SARS-CoV-2","AATTTGTACATATTAG",2,31.23,8.45,-2.38,0.25,1.8,1.1,0.02,">1 nonsynonymous","N4V S113F",2
"lib2","SARS-CoV-2","AATTTGTATGACAAGT",6,82.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7S W23T V37D N157W T201G",5
"lib2","SARS-CoV-2","AATTTGTCCCATCTGC",1,14.87,9.65,-1.18,0.08,2.98,1.03,0,">1 nonsynonymous","T46V C61Y Q168G",3
"lib2","SARS-CoV-2","AATTTGTGTAAGAAGG",7,76.53,10.83,-0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTGTTCCGAATAG",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E S184L",2
"lib2","SARS-CoV-2","AATTTGTTTGCTCAAA",2,34.8,9.95,-0.89,0.12,2.65,1.06,0.01,">1 nonsynonymous","N64S E141G P169F",3
"lib2","SARS-CoV-2","AATTTTAAACGAAAAA",1,46.28,10.36,-0.48,0.06,2.86,1.15,0,"1 nonsynonymous","F156Y",1
"lib2","SARS-CoV-2","AATTTTAACGTAACGT",1,52.9,6.77,-4.06,0.27,1.5,1.11,0.01,">1 nonsynonymous","D98R L125E G174I",3
"lib2","SARS-CoV-2","AATTTTAAGAAGTTGT",3,50.68,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C6F R27A T46L I80F G83V N92Q D97S L122A Q176H",9
"lib2","SARS-CoV-2","AATTTTAAGATCATTA",10,171.2,10.18,-0.66,0.03,2.95,1.03,0,">1 nonsynonymous","L60Q K87T A105S H189W",4
"lib2","SARS-CoV-2","AATTTTAATATTATCA",13,2.34,NA,NA,NA,NA,NA,NA,"stop","R16C K94E N107*",3
"lib2","SARS-CoV-2","AATTTTAATTCACAAG",20,272.06,10.74,-0.09,0.04,2.96,1.04,0,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","AATTTTACACACGCCG",5,61.86,9.7,-1.14,0.06,2.86,1.1,0,">1 nonsynonymous","Y35W A42M Y119N",3
"lib2","SARS-CoV-2","AATTTTACGAATATAT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","C102R T148P P169*",3
"lib2","SARS-CoV-2","AATTTTACTACGTCCA",7,58.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51T S139P",2
"lib2","SARS-CoV-2","AATTTTACTCCCGTAG",12,77.13,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5K L38F V103G",3
"lib2","SARS-CoV-2","AATTTTAGAAATTGAA",11,131.65,9.25,-1.59,0.04,2.03,1.08,0,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","AATTTTAGCAGCTCGT",2,19.03,9.18,-1.65,0.34,1.5,1,0.05,">1 nonsynonymous","A18S A81D P96A",3
"lib2","SARS-CoV-2","AATTTTAGCATATTTG",8,161.45,8.29,-2.55,0.14,1.74,1.11,0.01,">1 nonsynonymous","K87E Y123I T148R",3
"lib2","SARS-CoV-2","AATTTTAGGAAGTCTC",7,95.37,9.7,-1.13,0.04,2.89,1.05,0,">1 nonsynonymous","A42R G146T N151M",3
"lib2","SARS-CoV-2","AATTTTATATAAACAC",7,100.66,9.52,-1.32,0.06,2.17,1.06,0,">1 nonsynonymous","I28L Y91T A192S",3
"lib2","SARS-CoV-2","AATTTTATCCTCACCG",2,54.26,9.56,-1.28,0.06,2.97,1.07,0,"1 nonsynonymous","Q168V",1
"lib2","SARS-CoV-2","AATTTTATCTAAGTAT",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F A33K G83T Q144R",4
"lib2","SARS-CoV-2","AATTTTATTCGTATCA",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A F44Y N130S P149M R179C",5
"lib2","SARS-CoV-2","AATTTTCAAATGCCAA",2,45.89,10.56,-0.28,0.04,2.88,1.09,0,">1 nonsynonymous","K114V N151F",2
"lib2","SARS-CoV-2","AATTTTCCAAATTTCG",9,109.2,10.8,-0.04,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AATTTTCCTTAACGGC",3,76.59,10.7,-0.13,0.08,2.79,1.23,0,">1 nonsynonymous","P7A V37K V115R P197K",4
"lib2","SARS-CoV-2","AATTTTCTGTTTACCA",6,69.12,6,-4.84,1.32,1.5,1.1,0,">1 nonsynonymous","K26T T55P P82T N92E",4
"lib2","SARS-CoV-2","AATTTTCTTAATAAGA",9,91.13,9.43,-1.41,0.07,1.98,1.04,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AATTTTCTTAGAAACA",10,138.9,6.48,-4.36,0.27,1.5,1.11,0.01,">1 nonsynonymous","L162K Q176M",2
"lib2","SARS-CoV-2","AATTTTGAACCTAGAA",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y E141T G146M C158R",4
"lib2","SARS-CoV-2","AATTTTGACACACGTG",3,40.53,7.01,-3.83,0.2,1.5,1.06,0.01,">1 nonsynonymous","R16Y D112N V173D",3
"lib2","SARS-CoV-2","AATTTTGATCTAATTT",2,98.4,10.66,-0.17,0.06,2.9,1.1,0,">1 nonsynonymous","K132S T140H",2
"lib2","SARS-CoV-2","AATTTTGCAAAACATG",2,7.17,6,-4.84,2,3,1.24,0.01,"1 nonsynonymous","V103G",1
"lib2","SARS-CoV-2","AATTTTGCATTCAATG",2,15.75,9.56,-1.28,0.14,2.36,1,0.01,">1 nonsynonymous","Y121W T140V",2
"lib2","SARS-CoV-2","AATTTTGCGTACTATG",1,126.13,9.07,-1.77,0.05,2.93,1.09,0,"1 nonsynonymous","G117F",1
"lib2","SARS-CoV-2","AATTTTGTAGCGAGAG",2,66.35,10.1,-0.74,0.09,2.44,1.02,0,"1 nonsynonymous","A81I",1
"lib2","SARS-CoV-2","AATTTTTAAAAAAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12K N110M T201*",3
"lib2","SARS-CoV-2","AATTTTTAAATGTAGA",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y K128S Q144D F160V",4
"lib2","SARS-CoV-2","AATTTTTATGGTAAAA",1,36.37,10.09,-0.74,0.11,2.24,1.11,0.01,">1 nonsynonymous","E10W T55G D97L K128S",4
"lib2","SARS-CoV-2","AATTTTTATTAGAATA",1,24.23,6.63,-4.2,0.35,1.5,1.17,0.01,">1 nonsynonymous","A22K G74N D90Q Y119R S139T",5
"lib2","SARS-CoV-2","AATTTTTCTATAGGCG",1,1.1,NA,NA,NA,NA,NA,NA,"stop","N4M Y35* C49N Q84A T201D",5
"lib2","SARS-CoV-2","AATTTTTGTTACCTTG",2,5.55,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y35R K94L R136L E141L G166V",5
"lib2","SARS-CoV-2","AATTTTTTCGAAAAGC",11,115.4,8.05,-2.79,0.26,1.5,1.09,0.03,">1 nonsynonymous","S41T T46R G117R P149F",4
"lib2","SARS-CoV-2","AATTTTTTTGGTAAAC",9,65.7,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9Q N24T K48L K87P C158T Y175C",6
"lib2","SARS-CoV-2","ACAAAAAAAAGAAATA",3,106.78,8.53,-2.3,0.08,2.87,1.05,0,">1 nonsynonymous","V37F N110P Y175V",3
"lib2","SARS-CoV-2","ACAAAAAAAAGGGACC",2,54.7,10.9,0.06,0.11,2.86,1.06,0,">1 nonsynonymous","R16Y T100Y",2
"lib2","SARS-CoV-2","ACAAAAAAAATGCAGT",1,10.95,10.07,-0.77,0.08,2.92,1.02,0,">1 nonsynonymous","E10M D75E S200E",3
"lib2","SARS-CoV-2","ACAAAAAAAATTAAAA",1,14.57,10.76,-0.08,0.06,2.94,1.07,0,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","ACAAAAAAAATTAATA",2,69.39,10.78,-0.06,0.04,2.9,1.05,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","ACAAAAAAACAAATTT",3,14.93,6,-4.84,2,2.21,1.18,0.01,">1 nonsynonymous","C31S Y91F F99L G117P Y143K",5
"lib2","SARS-CoV-2","ACAAAAAAACTTGAAT",7,244.64,10.19,-0.64,0.04,2.74,1.04,0,">1 nonsynonymous","A14I T100Y",2
"lib2","SARS-CoV-2","ACAAAAAAAGCTACGG",2,88.8,6,-4.84,2,1.5,1.15,0,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","ACAAAAAAAGCTGAAG",6,0.21,NA,NA,NA,NA,NA,NA,"stop","I2T K114T P149S N157S A192T T201*",6
"lib2","SARS-CoV-2","ACAAAAAAAGTTTAGA",15,40.53,6,-4.84,2,2.14,1.12,0.01,">1 nonsynonymous","R16P L122W V182F",3
"lib2","SARS-CoV-2","ACAAAAAACACTTAAT",3,0.4,NA,NA,NA,NA,NA,NA,"stop","K56T C61I S108I Y121* R136S S200Y",6
"lib2","SARS-CoV-2","ACAAAAAACCACGGGC",1,20.82,10.76,-0.08,0.04,2.97,1.04,0,"1 nonsynonymous","D98H",1
"lib2","SARS-CoV-2","ACAAAAAACCGCAGGA",2,22.25,6,-4.84,2,1.5,1.15,0.08,">1 nonsynonymous","V37E N58F N120D P149Y N157V",5
"lib2","SARS-CoV-2","ACAAAAAACGCGCGAG",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y Q84M D90V I104N L122R Y165W",6
"lib2","SARS-CoV-2","ACAAAAAACTAAGTGA",1,12.85,6,-4.84,2,3,1.1,0,">1 nonsynonymous","P54Y D68T I142Y",3
"lib2","SARS-CoV-2","ACAAAAAACTTTAAAG",3,22.59,10.88,0.04,0.06,3,1.03,0,"1 nonsynonymous","L122E",1
"lib2","SARS-CoV-2","ACAAAAAAGAGTCCCT",9,72.24,10.26,-0.57,0.03,2.82,1.08,0,">1 nonsynonymous","T55I F185Y",2
"lib2","SARS-CoV-2","ACAAAAAAGGTATAGA",2,6.24,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C49R G83Y F99R S139T T170D",5
"lib2","SARS-CoV-2","ACAAAAAAGTTGATTG",8,65.14,10.88,0.05,0.07,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAAATAAGGCGA",10,236.18,10.88,0.05,0.03,2.92,1.08,0,">1 nonsynonymous","D59E K198N",2
"lib2","SARS-CoV-2","ACAAAAAATAGAAATA",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23T P96M",2
"lib2","SARS-CoV-2","ACAAAAAATTTAAGCC",1,27.44,7.91,-2.92,0.22,2.35,1.04,0.02,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","ACAAAAAATTTTATAC",7,131.71,9.9,-0.93,0.05,2.87,1.04,0,">1 nonsynonymous","S139A G155N",2
"lib2","SARS-CoV-2","ACAAAAACAAACATGG",3,17.36,6,-4.84,1.3,1.5,1.15,0.02,">1 nonsynonymous","V37K N64L A105P",3
"lib2","SARS-CoV-2","ACAAAAACAATCTAAA",1,14.66,10.28,-0.56,0.05,2.87,1.06,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","ACAAAAACATGAGCAA",1,16.16,10.8,-0.04,0.04,3,1.02,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","ACAAAAACATTCTTGC",3,79,10.32,-0.52,0.05,2.84,1.08,0,"1 nonsynonymous","R127A",1
"lib2","SARS-CoV-2","ACAAAAACCACGCATA",4,7.84,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T55Y P82L K87C T100R P149N",5
"lib2","SARS-CoV-2","ACAAAAACCCAGTGGC",2,83.32,8.45,-2.38,0.14,2.41,1.02,0.01,"1 nonsynonymous","Q176V",1
"lib2","SARS-CoV-2","ACAAAAACCTTTGCCA",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30P N107K",2
"lib2","SARS-CoV-2","ACAAAAACGACATGTT",7,69.47,10.54,-0.29,0.07,2.82,1.13,0,"1 nonsynonymous","E186T",1
"lib2","SARS-CoV-2","ACAAAAACGATCTGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* A14L N92D S139T",4
"lib2","SARS-CoV-2","ACAAAAACTGAACCGA",4,7.61,9.24,-1.6,0.22,2.7,1.33,0.01,">1 nonsynonymous","C61Y A145R",2
"lib2","SARS-CoV-2","ACAAAAACTGTCACTT",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E A42I P54L G86Q T140K S184V C195K",7
"lib2","SARS-CoV-2","ACAAAAACTTATGCAT",1,9.31,10.46,-0.38,0.13,2.73,1.3,0.01,"1 nonsynonymous","Y39E",1
"lib2","SARS-CoV-2","ACAAAAAGAAAAGCTA",5,77.15,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y39L I72K I80L D90L T140F",5
"lib2","SARS-CoV-2","ACAAAAAGAATTCCCA",2,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D F70I",2
"lib2","SARS-CoV-2","ACAAAAAGCGTATTTA",5,2.53,NA,NA,NA,NA,NA,NA,"stop","N13Y S41W Y91E L95N G152*",5
"lib2","SARS-CoV-2","ACAAAAAGCTACTACT",3,30.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A F47P K87R C158F P191T",5
"lib2","SARS-CoV-2","ACAAAAAGCTCTACTA",7,161.93,8.94,-1.89,0.05,1.92,1.1,0,">1 nonsynonymous","D90Y N107K K128V P197L",4
"lib2","SARS-CoV-2","ACAAAAAGTACATAGC",7,141.53,10.65,-0.18,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAAGTCAACATT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K S41M V52N E76Q V182K T201C",6
"lib2","SARS-CoV-2","ACAAAAAGTCACTAGT",4,8.57,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3L D34H P54N N107Y D137V",5
"lib2","SARS-CoV-2","ACAAAAAGTGTTAGTT",1,5.17,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","R16T P96N E135L",3
"lib2","SARS-CoV-2","ACAAAAATAAATACAG",5,81.74,10.26,-0.57,0.02,3,1.02,0,">1 nonsynonymous","I2T I142F G155S",3
"lib2","SARS-CoV-2","ACAAAAATAGGCAGAC",4,106.62,9.33,-1.51,0.07,2.78,1.04,0,">1 nonsynonymous","V20A F126V",2
"lib2","SARS-CoV-2","ACAAAAATAGGGCTAT",1,43.27,10.3,-0.54,0.09,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAATATTGTGCA",10,54.22,6,-4.84,2,3,1.21,0,">1 nonsynonymous","T85H I104S Y121G",3
"lib2","SARS-CoV-2","ACAAAAATCATAACAT",5,152.62,10.92,0.09,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAATCCAAAGGA",1,11.17,10.73,-0.11,0.11,2.85,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAATGAACATAA",5,49.11,10.62,-0.22,0.07,2.92,1.09,0,">1 nonsynonymous","N4C C61N",2
"lib2","SARS-CoV-2","ACAAAAATGCCCCAAA",4,28.53,10.76,-0.08,0.07,2.88,1.14,0,"1 nonsynonymous","G116K",1
"lib2","SARS-CoV-2","ACAAAAATGTCACCAG",11,52.89,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P96Y N107C V173G",3
"lib2","SARS-CoV-2","ACAAAAATTATCTTGT",4,37.01,6,-4.84,0.82,3,1.18,0.01,"1 nonsynonymous","F167A",1
"lib2","SARS-CoV-2","ACAAAAATTTTTAGTT",1,101,9.91,-0.93,0.03,2.89,1.02,0,">1 nonsynonymous","K56H T63S K128V I142P",4
"lib2","SARS-CoV-2","ACAAAACAATCAACAG",5,96.57,6,-4.84,2,3,1.19,0,">1 nonsynonymous","T85M G86M L131H G172A P177W",5
"lib2","SARS-CoV-2","ACAAAACAGAAATCCA",3,21.47,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C61Q A81S E135M F167G",4
"lib2","SARS-CoV-2","ACAAAACATATAACCG",3,174.98,10.91,0.07,0.04,2.94,1.07,0,">1 nonsynonymous","L5E F160K",2
"lib2","SARS-CoV-2","ACAAAACATGTGCTGT",11,205.22,10.68,-0.16,0.02,2.96,1.06,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","ACAAAACATTAAACAA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","Y35H G83* L95W G146* Y165L",5
"lib2","SARS-CoV-2","ACAAAACCAGTGTATT",2,22.64,10.81,-0.03,0.06,2.88,1.13,0,"1 nonsynonymous","V115R",1
"lib2","SARS-CoV-2","ACAAAACCATTCGATT",2,428.59,8.88,-1.95,0.1,1.71,1.07,0,">1 nonsynonymous","Y21H F44R Y91L",3
"lib2","SARS-CoV-2","ACAAAACCCCAAATAG",2,9.34,10.58,-0.26,0.09,3,1.02,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","ACAAAACCTTCTAGAC",4,0.91,NA,NA,NA,NA,NA,NA,"stop","A22W V37G F44I D90I S164T F185* P197V",7
"lib2","SARS-CoV-2","ACAAAACGAAAGACAG",8,59.67,10.47,-0.36,0.05,2.97,1.06,0,"1 nonsynonymous","N58F",1
"lib2","SARS-CoV-2","ACAAAACGACGGGTAA",7,61.93,6,-4.84,0.86,1.5,1.1,0,">1 nonsynonymous","F17E K114F R136E",3
"lib2","SARS-CoV-2","ACAAAACGCAATTATA",15,186.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S36W S69R T100S S147Y",4
"lib2","SARS-CoV-2","ACAAAACGCGAACTAA",6,100.66,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K56M L95P P133E F156S",4
"lib2","SARS-CoV-2","ACAAAACGTTAGGTCA",5,47.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G86L N107T L122S L131P",4
"lib2","SARS-CoV-2","ACAAAACTGACTAATT",4,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R K56A L95D A105G N120K",5
"lib2","SARS-CoV-2","ACAAAACTTAAGTGCA",5,61.86,9.98,-0.85,0.06,2.92,1.08,0,"1 nonsynonymous","G146N",1
"lib2","SARS-CoV-2","ACAAAACTTACCCAAT",2,5.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S Q79P I142R",3
"lib2","SARS-CoV-2","ACAAAACTTATCTAGC",2,24.37,9.57,-1.27,0.06,3,1.01,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","ACAAAACTTCATCGGG",7,128.45,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","T3C A18N K56V N120I E141K G152I",6
"lib2","SARS-CoV-2","ACAAAAGAATCTGCCT",7,43.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3V R16A G83V D90W W106S R127F G152T G166R",8
"lib2","SARS-CoV-2","ACAAAAGAGATCCTCT",4,0.51,NA,NA,NA,NA,NA,NA,"stop","N92E V115T Y123I Q144R N157K F185L K198*",7
"lib2","SARS-CoV-2","ACAAAAGAGGGCCAAG",5,18.13,6.51,-4.32,0.3,1.5,1.07,0.01,">1 nonsynonymous","W23G Y50V",2
"lib2","SARS-CoV-2","ACAAAAGAGTATTGAA",1,23.18,6.42,-4.41,0.71,1.5,1.15,0.02,">1 nonsynonymous","A89N I142C",2
"lib2","SARS-CoV-2","ACAAAAGATACTGACA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92S G152P",2
"lib2","SARS-CoV-2","ACAAAAGCAATGTCTT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","V11M I28*",2
"lib2","SARS-CoV-2","ACAAAAGCATAAATAC",1,84.92,10.85,0.01,0.06,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAAGCCACTAGAC",3,9.48,9.99,-0.85,0.08,2.99,1,0,">1 nonsynonymous","G9V A33Q N130H P149S T201Q",5
"lib2","SARS-CoV-2","ACAAAAGCGCACATCT",2,8.86,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","Y21Q K56L F99S N118E",4
"lib2","SARS-CoV-2","ACAAAAGCGGAAAAGT",2,35.16,9.49,-1.35,0.06,2.93,1.05,0,">1 nonsynonymous","Y119I Q163K",2
"lib2","SARS-CoV-2","ACAAAAGGCTGTATGC",13,94.5,6,-4.84,1.43,1.5,1.18,0.01,">1 nonsynonymous","T15I W23Y V32L Y66K L122R K132F",6
"lib2","SARS-CoV-2","ACAAAAGGGCGCTAGT",9,51.04,8.16,-2.68,0.13,2.42,1.09,0.01,"1 nonsynonymous","S113E",1
"lib2","SARS-CoV-2","ACAAAAGTAAAAATCT",15,194.43,10.76,-0.07,0.05,2.85,1.11,0,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","ACAAAAGTCACACGTT",6,2.89,NA,NA,NA,NA,NA,NA,"stop","S19P G51V K56* N130P",4
"lib2","SARS-CoV-2","ACAAAAGTCCTACGAC",4,9.77,10.54,-0.29,0.19,2.7,1.25,0.02,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","ACAAAATAAATTTGGG",4,140.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4Y Y119A Y175L",3
"lib2","SARS-CoV-2","ACAAAATAACGGAATC",6,130.97,8.4,-2.44,0.1,2.44,1.08,0,">1 nonsynonymous","L38W G146E K198I",3
"lib2","SARS-CoV-2","ACAAAATAATAGCACT",2,22.7,9.61,-1.23,0.14,2.84,1.13,0.01,">1 nonsynonymous","Y119S V173R",2
"lib2","SARS-CoV-2","ACAAAATACGAGAAAA",12,95.01,9.61,-1.23,0.07,2.01,1.05,0,">1 nonsynonymous","F99M G116R",2
"lib2","SARS-CoV-2","ACAAAATATGCCAAAG",3,71.81,9.47,-1.37,0.09,1.99,1.09,0,">1 nonsynonymous","L38S K56A I104L",3
"lib2","SARS-CoV-2","ACAAAATCACAATATG",2,37.32,10.16,-0.68,0.09,2.55,1.05,0,">1 nonsynonymous","N30T S43Q A67F",3
"lib2","SARS-CoV-2","ACAAAATCACTACACT",25,116.1,8.96,-1.88,0.25,1.5,1,0.03,">1 nonsynonymous","P96G A105V N151R",3
"lib2","SARS-CoV-2","ACAAAATCAGTATTGA",5,126.37,10.22,-0.62,0.05,2.48,1.02,0,"1 nonsynonymous","P82V",1
"lib2","SARS-CoV-2","ACAAAATCATCTCCAA",11,9.17,NA,NA,NA,NA,NA,NA,"stop","V20M V71*",2
"lib2","SARS-CoV-2","ACAAAATCTAGCCACG",9,83.03,8.54,-2.3,0.09,2.03,1.1,0,">1 nonsynonymous","Y39L Y119R P149K F185H G196N",5
"lib2","SARS-CoV-2","ACAAAATCTCAAGCGT",7,128.64,10.91,0.07,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAATCTGGAGCCG",1,38.31,10.04,-0.8,0.12,2.48,1.02,0.01,">1 nonsynonymous","Y21M S36R",2
"lib2","SARS-CoV-2","ACAAAATGCACTAAAA",3,12.3,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51F G86S I104K D137K",4
"lib2","SARS-CoV-2","ACAAAATGCGTGAAAT",8,210.58,9.52,-1.32,0.07,2.46,1.08,0,">1 nonsynonymous","L60P G116F K199Y",3
"lib2","SARS-CoV-2","ACAAAATGGAATCAAT",1,23.73,9.86,-0.98,0.11,2.49,1.1,0.01,">1 nonsynonymous","C6Q G155F",2
"lib2","SARS-CoV-2","ACAAAATGGCACGGGG",5,29.61,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C102L D112E T170N K199W",4
"lib2","SARS-CoV-2","ACAAAATGTAATTCAA",9,104.94,7.23,-3.6,0.11,1.5,1.09,0,">1 nonsynonymous","K48R G86L",2
"lib2","SARS-CoV-2","ACAAAATTAACTTACA",4,1.01,NA,NA,NA,NA,NA,NA,"stop","E141* L162*",2
"lib2","SARS-CoV-2","ACAAAATTAAGGCTTT",4,30.96,9.71,-1.12,0.27,1.92,1,0.03,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","ACAAAATTATAGTAAC",4,102.76,10.62,-0.22,0.02,2.96,1.04,0,">1 nonsynonymous","T55S D90L Y123K",3
"lib2","SARS-CoV-2","ACAAAATTCACAAACT",7,15.67,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C49Y G101H A105T Y121L S139T S184H",6
"lib2","SARS-CoV-2","ACAAAATTCCGCGGGG",6,60.4,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","Y93L S113M",2
"lib2","SARS-CoV-2","ACAAAATTGAAAGAAA",1,20.3,10.38,-0.46,0.05,3,1.01,0,">1 nonsynonymous","I2A N64G A81G",3
"lib2","SARS-CoV-2","ACAAAATTTCGTGACA",10,75.65,10.28,-0.55,0.04,2.77,1.05,0,">1 nonsynonymous","K128N G152C",2
"lib2","SARS-CoV-2","ACAAACAAAGACTTTC",5,28.75,6,-4.84,1.34,3,1.07,0,">1 nonsynonymous","G86F F99C Y119F T201S",4
"lib2","SARS-CoV-2","ACAAACAACATACGAC",5,23.86,7.84,-3,0.27,1.5,1.09,0.03,">1 nonsynonymous","A14S A89W",2
"lib2","SARS-CoV-2","ACAAACAACATGATTA",5,130.22,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S53L Y175P",2
"lib2","SARS-CoV-2","ACAAACAAGAACAAAT",4,10.34,6.01,-4.83,2,3,1.26,0.02,">1 nonsynonymous","N64Y K132S V180Y",3
"lib2","SARS-CoV-2","ACAAACAATAAGTGGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S45I V77L F99I P197*",4
"lib2","SARS-CoV-2","ACAAACAATTAGAAAA",5,232.05,10.79,-0.05,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAACACAGACCTGT",3,61.91,10.53,-0.31,0.05,2.91,1.07,0,"1 nonsynonymous","D90W",1
"lib2","SARS-CoV-2","ACAAACACAGATTCTG",4,6.23,6,-4.84,1.82,3,1,0.01,">1 nonsynonymous","Y35P A105D Y175F",3
"lib2","SARS-CoV-2","ACAAACACCCCAAATG",14,168.61,10.86,0.02,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAACACTATCCTGC",1,15.39,8.93,-1.91,0.19,2.2,1.11,0.02,">1 nonsynonymous","V20T N120S",2
"lib2","SARS-CoV-2","ACAAACACTTAACGCA",2,27.22,10.78,-0.06,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAACACTTTTCATA",9,21.85,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","E10L V77P P149N",3
"lib2","SARS-CoV-2","ACAAACAGAATACATA",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72P L122R F134H A190P",4
"lib2","SARS-CoV-2","ACAAACATGACACAAA",16,199.4,9.59,-1.25,0.03,2.87,1.11,0,">1 nonsynonymous","L5R S113T",2
"lib2","SARS-CoV-2","ACAAACATTAACCGGG",4,59.63,9.19,-1.64,0.13,1.72,1.04,0.01,"1 nonsynonymous","Q79I",1
"lib2","SARS-CoV-2","ACAAACATTAATTTAA",8,42.68,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N4H A14E D59M A105P P169G",5
"lib2","SARS-CoV-2","ACAAACATTCGAATGA",6,1.86,NA,NA,NA,NA,NA,NA,"stop","I28A S139N P149* V153S F160L",5
"lib2","SARS-CoV-2","ACAAACCAAAGACAAA",3,13.3,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","P7V D137T",2
"lib2","SARS-CoV-2","ACAAACCAACATTTCC",4,53.65,8.68,-2.16,0.25,1.5,1.1,0.03,">1 nonsynonymous","E10T R25K K87R",3
"lib2","SARS-CoV-2","ACAAACCAAGATTACA",3,29.37,8.72,-2.11,0.3,1.5,1,0.03,">1 nonsynonymous","S69F R136Y",2
"lib2","SARS-CoV-2","ACAAACCAAGGATAAT",10,77.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F47G G86Q P197E",3
"lib2","SARS-CoV-2","ACAAACCACCGCTACA",7,255.14,10.67,-0.17,0.04,2.95,1.06,0,">1 nonsynonymous","T3K N64Y G83Q",3
"lib2","SARS-CoV-2","ACAAACCACGAAATAC",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y L95M V103N A190L",4
"lib2","SARS-CoV-2","ACAAACCAGGTATTAA",2,60.96,8.84,-2,0.1,1.73,1.1,0,">1 nonsynonymous","K56L G86S S129D",3
"lib2","SARS-CoV-2","ACAAACCATGTCACGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3L A22* F44A D59G",4
"lib2","SARS-CoV-2","ACAAACCATTCCCGTA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","I28A K48* V103R",3
"lib2","SARS-CoV-2","ACAAACCATTTACCTA",2,40.34,10.68,-0.15,0.06,2.99,1.01,0,">1 nonsynonymous","C61S P149R",2
"lib2","SARS-CoV-2","ACAAACCCAACACTCT",10,74.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48Y S113W",2
"lib2","SARS-CoV-2","ACAAACCCACAATTTC",6,21.18,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V11W K87W K128Q D137R",4
"lib2","SARS-CoV-2","ACAAACCCATATGTGT",2,85.42,10.85,0.01,0.03,2.92,1.08,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","ACAAACCCATCACCTT",4,8.66,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","ACAAACCCCCCTTTTA",2,4.32,NA,NA,NA,NA,NA,NA,"stop","T15M S19E S29* S53C Y119T",5
"lib2","SARS-CoV-2","ACAAACCGCAGTCAAG",3,82.13,10.06,-0.77,0.06,2.93,1,0,">1 nonsynonymous","D75V N130L",2
"lib2","SARS-CoV-2","ACAAACCGCATAGACC",11,65.14,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G51C Y143T G174V",3
"lib2","SARS-CoV-2","ACAAACCGCCATACAG",13,2.43,NA,NA,NA,NA,NA,NA,"stop","A14R Y39T N64T L125P P149S G196*",6
"lib2","SARS-CoV-2","ACAAACCGCCGGTCCG",5,55.19,10.48,-0.35,0.04,3,1.01,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","ACAAACCGGAACAATG",3,35.85,10.13,-0.71,0.17,2.6,1.17,0.01,">1 nonsynonymous","N1W K114M K128D",3
"lib2","SARS-CoV-2","ACAAACCGGTATTCTG",1,40.17,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10V Y21A R73A A105G T148N",5
"lib2","SARS-CoV-2","ACAAACCTACCTAACT",6,98.4,10.74,-0.09,0.05,2.9,1.08,0,">1 nonsynonymous","V37T S129I",2
"lib2","SARS-CoV-2","ACAAACCTCTACACCT",1,32.63,6,-4.84,2,3,1.1,0,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","ACAAACCTGTGCTATA",2,24.3,10.85,0.01,0.06,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAAACCTTACAGTAC",1,10.24,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D59M K87P G116L G152V S184R",5
"lib2","SARS-CoV-2","ACAAACCTTGTTTTTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","ACAAACGAAAAATACA",1,47.88,10.49,-0.35,0.06,2.91,1.12,0,">1 nonsynonymous","E10R N120K",2
"lib2","SARS-CoV-2","ACAAACGAAAACAAAT",3,127.26,10.24,-0.59,0.06,2.75,1.04,0,">1 nonsynonymous","G51S E141V",2
"lib2","SARS-CoV-2","ACAAACGAACGTGATC",9,221.93,10.51,-0.32,0.03,2.91,1.08,0,"1 nonsynonymous","Y178V",1
"lib2","SARS-CoV-2","ACAAACGACAGGGTCT",6,70.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4R N40Y A81H D90T I142A P177Q",6
"lib2","SARS-CoV-2","ACAAACGACATATGCT",2,6.59,7.07,-3.76,0.27,1.91,1.06,0.02,">1 nonsynonymous","P7E G83R P96W",3
"lib2","SARS-CoV-2","ACAAACGACATCAAGT",2,74.18,10.92,0.09,0.04,2.94,1.06,0,"1 nonsynonymous","S29G",1
"lib2","SARS-CoV-2","ACAAACGACCCTACAA",14,62.87,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","G101C G196K",2
"lib2","SARS-CoV-2","ACAAACGACGTAGTCA",3,7.08,10.72,-0.12,0.07,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAACGATACAGGCC",1,83.6,10.04,-0.8,0.04,2.91,1.06,0,">1 nonsynonymous","A42D Y175H",2
"lib2","SARS-CoV-2","ACAAACGATCAACACT",2,30.29,8.1,-2.74,0.19,2.19,1.14,0.02,">1 nonsynonymous","E135G G146M",2
"lib2","SARS-CoV-2","ACAAACGATTCGACTG",5,45.08,8.85,-1.98,0.24,1.5,1,0.03,">1 nonsynonymous","I28V Y91L L131T",3
"lib2","SARS-CoV-2","ACAAACGCAACTTATG",2,22,10.2,-0.63,0.09,2.91,1.05,0,"1 nonsynonymous","P169Q",1
"lib2","SARS-CoV-2","ACAAACGCAATTACGT",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R F156K",2
"lib2","SARS-CoV-2","ACAAACGCAGATATAT",7,22.2,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N92K T201S",2
"lib2","SARS-CoV-2","ACAAACGGTTACCACT",11,5.53,NA,NA,NA,NA,NA,NA,"stop","C31Y S184*",2
"lib2","SARS-CoV-2","ACAAACTAACACTATA",4,238.21,10.26,-0.58,0.03,2.81,1.04,0,">1 nonsynonymous","T3K D98C V173F",3
"lib2","SARS-CoV-2","ACAAACTACAATACCG",17,274.93,9.21,-1.63,0.03,2.88,1.11,0,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","ACAAACTACATATAAT",2,8.7,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N58R K94L T148Q",3
"lib2","SARS-CoV-2","ACAAACTATAGTTCTC",14,42.09,9.51,-1.33,0.1,2.15,1.12,0,">1 nonsynonymous","K87F S129I R136V S200R",4
"lib2","SARS-CoV-2","ACAAACTATTACTTTG",3,18.83,10.13,-0.7,0.08,2.95,1,0,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","ACAAACTCAATATGTT",10,40.11,9.66,-1.17,0.46,1.5,1,0.07,">1 nonsynonymous","V103R K114M",2
"lib2","SARS-CoV-2","ACAAACTCAGGTTCCC",2,18.38,9.65,-1.19,0.19,2.05,1,0.01,">1 nonsynonymous","F44W Y91S S139G",3
"lib2","SARS-CoV-2","ACAAACTCATGAAGTA",7,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K G86L F99E G166L",4
"lib2","SARS-CoV-2","ACAAACTCCTCAGCCT",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144K G152L",2
"lib2","SARS-CoV-2","ACAAACTGATCAGCCA",14,10.93,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15R C49S Y123W",3
"lib2","SARS-CoV-2","ACAAACTGCCGATAAG",11,156.29,10.82,-0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAACTGCTAAAATA",3,17.67,9.89,-0.95,0.14,2.24,1,0.01,">1 nonsynonymous","F44P G83E",2
"lib2","SARS-CoV-2","ACAAACTGGACATAGC",8,40.96,8.97,-1.87,0.16,1.5,1.08,0.02,">1 nonsynonymous","S45P D90V",2
"lib2","SARS-CoV-2","ACAAACTGGATCCGAC",1,18.39,8.48,-2.36,0.14,1.96,1.08,0.01,">1 nonsynonymous","S36L D97E L125P E135C",4
"lib2","SARS-CoV-2","ACAAACTGGCCGGTAG",4,133.55,8.57,-2.27,0.06,2.46,1.08,0,">1 nonsynonymous","G83S G146V P197K",3
"lib2","SARS-CoV-2","ACAAACTTATGTTGAA",1,17.63,7.5,-3.34,0.16,1.57,1.09,0.01,">1 nonsynonymous","N1P C150V",2
"lib2","SARS-CoV-2","ACAAACTTGCATTACA",2,41.81,9.62,-1.22,0.27,1.5,1,0.04,">1 nonsynonymous","D90K A105G I138S V180M",4
"lib2","SARS-CoV-2","ACAAACTTGTAACGGA",5,37.52,6.54,-4.3,0.55,1.5,1.22,0.04,">1 nonsynonymous","Y21L L38A",2
"lib2","SARS-CoV-2","ACAAACTTTCCGACGC",1,7.63,6,-4.84,2,3,1.1,0.02,">1 nonsynonymous","F70V D90I N107R L122Y",4
"lib2","SARS-CoV-2","ACAAACTTTGCCAAGA",1,29.68,10.54,-0.3,0.07,2.95,1.07,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","ACAAACTTTTGTAATT",5,97.22,8.57,-2.27,0.09,1.84,1.12,0,">1 nonsynonymous","S29I Y123A F156V S164C",4
"lib2","SARS-CoV-2","ACAAAGAAAGAGTTTA",8,150.13,10.8,-0.03,0.04,2.88,1.13,0,"1 nonsynonymous","E141D",1
"lib2","SARS-CoV-2","ACAAAGAACACGGACA",1,17.18,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","N107A R136M I142K",3
"lib2","SARS-CoV-2","ACAAAGAACCATAAAA",5,0.33,NA,NA,NA,NA,NA,NA,"stop","D98* A105I",2
"lib2","SARS-CoV-2","ACAAAGACAGATATAA",6,50.24,9.81,-1.03,0.07,2.23,1.06,0,">1 nonsynonymous","G9A A18T F44C",3
"lib2","SARS-CoV-2","ACAAAGACCAACAATC",1,5.92,11.11,0.27,0.18,2.72,1.26,0.01,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","ACAAAGAGTCAGAAAT",3,11.36,9.32,-1.52,0.17,1.91,1.01,0.02,">1 nonsynonymous","T46L S139T F185Q",3
"lib2","SARS-CoV-2","ACAAAGAGTTGAAAGT",4,3.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","ACAAAGATACCGGGAG",9,76.89,10.72,-0.12,0.03,2.92,1.08,0,">1 nonsynonymous","A42E T85I E141D",3
"lib2","SARS-CoV-2","ACAAAGATGTACACCT",10,35.48,10.9,0.06,0.04,2.86,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAGATTCCACTAG",7,61.46,10.48,-0.35,0.08,2.82,1.06,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","ACAAAGATTTGGGAAA",12,182.44,10.35,-0.48,0.02,2.9,1.03,0,">1 nonsynonymous","A22T D97R",2
"lib2","SARS-CoV-2","ACAAAGCAAAAAAATA",2,1.38,NA,NA,NA,NA,NA,NA,"stop","D68K A89G T100* N107Q",4
"lib2","SARS-CoV-2","ACAAAGCAAGTACCTG",9,60.02,10.81,-0.02,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAGCAGACAAAGT",10,93.53,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86E Y93G T100F F160C",4
"lib2","SARS-CoV-2","ACAAAGCATATACAAT",2,28.07,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14E Y35Q K94T S113C V181Y",5
"lib2","SARS-CoV-2","ACAAAGCCTAAATGAT",8,171.85,6.01,-4.82,0.86,1.5,1.2,0.01,">1 nonsynonymous","F12L V77A P133Q",3
"lib2","SARS-CoV-2","ACAAAGCGACCAGACG",8,85.52,10.19,-0.65,0.07,2.5,1,0,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","ACAAAGCGATCATGCC",3,95.55,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V37M Q84P D97Y Q168S Y178T",5
"lib2","SARS-CoV-2","ACAAAGCGGATTATGA",4,52.91,6,-4.84,1.62,1.5,1.22,0.04,">1 nonsynonymous","I88L K132P F167Y",3
"lib2","SARS-CoV-2","ACAAAGCGTAGGATTA",1,8.13,9.69,-1.15,0.1,2.91,1.06,0,">1 nonsynonymous","L95I G174C A192L",3
"lib2","SARS-CoV-2","ACAAAGCTAAAAAACA",5,75.71,10.57,-0.26,0.05,2.97,1.05,0,"1 nonsynonymous","F156P",1
"lib2","SARS-CoV-2","ACAAAGCTATGGCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","K94* Q144R",2
"lib2","SARS-CoV-2","ACAAAGCTGTAATATC",3,28.12,10.43,-0.4,0.06,2.97,1.04,0,">1 nonsynonymous","K87T T201C",2
"lib2","SARS-CoV-2","ACAAAGCTTATAAATA",5,60.35,6,-4.84,1.81,1.5,1.13,0.03,">1 nonsynonymous","P7S D59A D112A V115M Y143G F156P",6
"lib2","SARS-CoV-2","ACAAAGGACACAGGCA",10,191.35,10.84,0.01,0.04,2.95,1.06,0,">1 nonsynonymous","S43L Q163T A192I",3
"lib2","SARS-CoV-2","ACAAAGGATTTTCCAA",9,8.69,NA,NA,NA,NA,NA,NA,"stop","L131* T148S F156A Q168T G196K",5
"lib2","SARS-CoV-2","ACAAAGGCAAAACTAA",3,23.04,10.93,0.09,0.05,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAGGCCGGATGGA",9,121.78,10.87,0.03,0.05,2.94,1.07,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","ACAAAGGGCAAATGAA",3,11.44,9.75,-1.09,0.23,2.7,1.15,0.02,">1 nonsynonymous","G117Q K132D E154Q",3
"lib2","SARS-CoV-2","ACAAAGGTACACCGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85E K94V P191S",3
"lib2","SARS-CoV-2","ACAAAGGTGAATGAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5C A14R P149*",3
"lib2","SARS-CoV-2","ACAAAGGTGTGCATAC",4,85.02,10.84,0,0.06,2.84,1.06,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","ACAAAGGTTACCGATT",3,99.03,10.49,-0.34,0.05,2.95,1.02,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","ACAAAGGTTTAGATTG",4,5.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99E Q168N",2
"lib2","SARS-CoV-2","ACAAAGTACACAATAG",2,10.48,10.88,0.05,0.05,3,1.01,0,">1 nonsynonymous","C61V E186D",2
"lib2","SARS-CoV-2","ACAAAGTAGGAGACGG",8,115.76,10.5,-0.33,0.03,2.85,1.08,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","ACAAAGTCACCTCCCG",5,42.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7M A14V V71S",3
"lib2","SARS-CoV-2","ACAAAGTCAGATTTAG",1,10.45,10.19,-0.65,0.14,2.65,1,0.01,">1 nonsynonymous","N4Y W106F",2
"lib2","SARS-CoV-2","ACAAAGTCCCTCTCGG",3,0,NA,NA,NA,NA,NA,NA,"stop","V37P K198*",2
"lib2","SARS-CoV-2","ACAAAGTGACAATATT",1,69.99,10.7,-0.14,0.03,2.93,1.06,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","ACAAAGTGATCCCTGA",9,89.12,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K87R D97V V103L Q163A Q168I",5
"lib2","SARS-CoV-2","ACAAAGTGCAGCCGTT",19,169.78,6.98,-3.86,0.3,1.5,1.16,0.02,"1 nonsynonymous","R127P",1
"lib2","SARS-CoV-2","ACAAAGTGCGGACTTA",1,15.92,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V77Q N92T I138T G174T",4
"lib2","SARS-CoV-2","ACAAAGTGGAGACTTA",3,43.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K56V P82Q K87T T100A Q168E",5
"lib2","SARS-CoV-2","ACAAAGTGGCCGGACG",7,113.07,10.85,0.01,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAAGTTACAAACTC",4,60.41,6.02,-4.81,1.33,1.5,1.2,0.03,">1 nonsynonymous","Y39E D90V S139F",3
"lib2","SARS-CoV-2","ACAAAGTTAGTCTCTA",7,145.98,9.29,-1.54,0.04,2.78,1.06,0,">1 nonsynonymous","C6P T46H K87S",3
"lib2","SARS-CoV-2","ACAAAGTTCAAATCGA",3,15.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Q Y121K",2
"lib2","SARS-CoV-2","ACAAAGTTTAGCCGAA",8,243.71,10.7,-0.13,0.02,2.95,1.06,0,">1 nonsynonymous","G9A A81Q",2
"lib2","SARS-CoV-2","ACAAATAAAAAACGTT",14,173.57,10.41,-0.43,0.05,2.9,1.07,0,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","ACAAATAAACGAGTCA",1,7.32,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y39P C61R Q84M V103N K132R",5
"lib2","SARS-CoV-2","ACAAATAAAGAAAGAT",10,10.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3M C49Y F62Y T140A S200L",5
"lib2","SARS-CoV-2","ACAAATAACCAAAGAA",10,77.27,9.64,-1.19,0.05,2.01,1.04,0,">1 nonsynonymous","L5R W106H",2
"lib2","SARS-CoV-2","ACAAATAAGAAAAGCG",2,64.26,10.75,-0.09,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAATAAGGAAATGT",4,13.09,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","A42V P96T N120V P169I",4
"lib2","SARS-CoV-2","ACAAATAATAATATAC",2,52.92,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D97E C150D S164N",3
"lib2","SARS-CoV-2","ACAAATAATGGATACA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","A33S P96L K114G L125T R136N Q168*",6
"lib2","SARS-CoV-2","ACAAATAATGTGATAT",1,62.5,6,-4.84,2,3,1.2,0,">1 nonsynonymous","V37S F70M P177E",3
"lib2","SARS-CoV-2","ACAAATAATTTGCATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R N110T Y119V R127S V173L",5
"lib2","SARS-CoV-2","ACAAATACATTGCGAG",4,25.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N107F T148Q",2
"lib2","SARS-CoV-2","ACAAATACCGAAACTA",2,52.29,7.88,-2.96,0.16,1.64,1.1,0.01,">1 nonsynonymous","S113F Y119A",2
"lib2","SARS-CoV-2","ACAAATACCTATAAAT",8,136.73,10.09,-0.75,0.03,2.95,1.02,0,">1 nonsynonymous","T15N S19P V37M K87T",4
"lib2","SARS-CoV-2","ACAAATACCTTTATAT",7,86.41,10.98,0.14,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAATACGAGTAGAC",3,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F Y50S Q84K V181K",4
"lib2","SARS-CoV-2","ACAAATAGAAAACCTT",3,23.53,7.51,-3.33,0.42,1.5,1.08,0.06,">1 nonsynonymous","R27E F99A",2
"lib2","SARS-CoV-2","ACAAATAGAAAATCGC",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ACAAATATAATCATCA",3,3.1,NA,NA,NA,NA,NA,NA,"stop","G86S P177*",2
"lib2","SARS-CoV-2","ACAAATATAGAAGCAT",6,28.94,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N107Y N130W G152L N157T",4
"lib2","SARS-CoV-2","ACAAATATAGCCATAC",5,35.8,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","A81F Y119V L188W",3
"lib2","SARS-CoV-2","ACAAATATGCAACATC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88K A105Q K128F G152F",4
"lib2","SARS-CoV-2","ACAAATATGCCACAAT",3,84.46,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5T F167V N171T Q176L",4
"lib2","SARS-CoV-2","ACAAATATTAGCTACG",7,15.32,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","T3L S41E D68S P96R",4
"lib2","SARS-CoV-2","ACAAATATTATACGCC",10,7.68,NA,NA,NA,NA,NA,NA,"stop","T3E K87A G116* Q176R",4
"lib2","SARS-CoV-2","ACAAATATTATAGAGA",3,42.83,10.5,-0.34,0.08,2.9,1.05,0,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","ACAAATATTTTTCCTT",1,11.32,6.07,-4.76,0.85,1.5,1.03,0.02,">1 nonsynonymous","K26C Y123M D137R",3
"lib2","SARS-CoV-2","ACAAATCAAACCTGTA",1,22.63,6.69,-4.15,0.45,1.7,1.22,0.02,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","ACAAATCAACCATTTC",3,42.94,6,-4.84,2,3,1.19,0,">1 nonsynonymous","T15E N107Q S139Y C150T",4
"lib2","SARS-CoV-2","ACAAATCACCCATACG",3,22.19,10.25,-0.59,0.03,2.95,1.05,0,">1 nonsynonymous","N4F Q84R",2
"lib2","SARS-CoV-2","ACAAATCACTAAAAAA",1,0.84,NA,NA,NA,NA,NA,NA,"stop","T15V Q84K T201*",3
"lib2","SARS-CoV-2","ACAAATCAGGAGGTCA",7,24.57,6,-4.84,2,3,1.22,0,">1 nonsynonymous","K56R Y93A",2
"lib2","SARS-CoV-2","ACAAATCAGGGCTAAA",4,69.43,10.31,-0.52,0.08,2.89,1.02,0,">1 nonsynonymous","C61W I104L N120S",3
"lib2","SARS-CoV-2","ACAAATCATACTTGCA",2,22.87,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S19Q V37I L95Y",3
"lib2","SARS-CoV-2","ACAAATCCAAACCATA",14,3.61,NA,NA,NA,NA,NA,NA,"stop","S19M S29F V37G F47I K87Y E154* Q176S",7
"lib2","SARS-CoV-2","ACAAATCCCAGAATGA",2,80.51,10.72,-0.12,0.09,2.86,1.13,0,">1 nonsynonymous","Y39W T55Y",2
"lib2","SARS-CoV-2","ACAAATCCCATACCAA",13,53.3,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","T3C F44V K56L D98Y Y119A Q168N",6
"lib2","SARS-CoV-2","ACAAATCCGGCTAGAG",4,56.67,10.87,0.03,0.07,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAATCCGTTCATGT",3,59.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39L D90N L131R T148F",4
"lib2","SARS-CoV-2","ACAAATCCTCATAACA",1,28.68,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S69K Y175M",2
"lib2","SARS-CoV-2","ACAAATCGTCAACAAT",8,0.57,NA,NA,NA,NA,NA,NA,"stop","A14N Y35* L60* T100R G174T",5
"lib2","SARS-CoV-2","ACAAATCTATTTGATG",12,160.67,10.19,-0.65,0.05,2.69,1.03,0,">1 nonsynonymous","T46R E186R",2
"lib2","SARS-CoV-2","ACAAATCTCAACCGCA",8,79.14,10.88,0.04,0.08,2.91,1.1,0,">1 nonsynonymous","V11I S36N F62Y",3
"lib2","SARS-CoV-2","ACAAATCTCAGTCCTG",1,17.88,7.25,-3.59,0.25,1.5,1.06,0.02,"1 nonsynonymous","C49Q",1
"lib2","SARS-CoV-2","ACAAATCTGAATTATT",2,0.6,NA,NA,NA,NA,NA,NA,"stop","R16G D59* I80F",3
"lib2","SARS-CoV-2","ACAAATCTTTGAGATG",1,24.76,9.9,-0.93,0.08,2.85,1.03,0,">1 nonsynonymous","L5M Y165M",2
"lib2","SARS-CoV-2","ACAAATCTTTGCTAGC",1,19.31,10.84,0.01,0.06,2.93,1.1,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","ACAAATGAACTAGATA",16,196.69,10.2,-0.64,0.07,2.63,1.06,0,">1 nonsynonymous","N4Q N107K N120S S164R",4
"lib2","SARS-CoV-2","ACAAATGAATATATAT",2,23.61,10.08,-0.76,0.04,2.55,1,0,">1 nonsynonymous","K56R T100I L131T",3
"lib2","SARS-CoV-2","ACAAATGACCAAGCAC",3,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17P A89L F99D R127S P161I",5
"lib2","SARS-CoV-2","ACAAATGACCGTGCTT",5,55.72,10.15,-0.69,0.07,2.63,1.01,0,">1 nonsynonymous","A42M E135I",2
"lib2","SARS-CoV-2","ACAAATGAGAGACTCA",4,44.31,10.01,-0.83,0.06,2.06,1.05,0,">1 nonsynonymous","K26S A67C Y178N S200A",4
"lib2","SARS-CoV-2","ACAAATGAGTCCTTCC",4,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S45P R73L Q84H D98V",5
"lib2","SARS-CoV-2","ACAAATGATAGTCACG",6,28.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9V D34L A42E F62S W106T Y119S",6
"lib2","SARS-CoV-2","ACAAATGCAACTATCC",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107D N120Y C158V",3
"lib2","SARS-CoV-2","ACAAATGCGGAAACAG",2,114.33,10.92,0.09,0.05,2.88,1.1,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","ACAAATGCGGTACGGA",4,1.24,NA,NA,NA,NA,NA,NA,"stop","A14I V77E I104*",3
"lib2","SARS-CoV-2","ACAAATGCTTACTGCG",1,19.46,10.57,-0.27,0.11,2.82,1.14,0.01,">1 nonsynonymous","T3Q S36W V173L",3
"lib2","SARS-CoV-2","ACAAATGGACAAATAT",7,48.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K56L A105K G152N F156C S200L",5
"lib2","SARS-CoV-2","ACAAATGGTTCCTACA",3,10.83,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","L60T G116T D137L G155M Q168S C195L",6
"lib2","SARS-CoV-2","ACAAATGTACATTGAC",1,61.38,10.84,0,0.05,2.84,1.16,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","ACAAATGTATACTATA",1,12.67,8.27,-2.57,0.42,1.5,1.03,0.03,">1 nonsynonymous","Y50T N64S N120P",3
"lib2","SARS-CoV-2","ACAAATGTATTGACTG",2,4.14,NA,NA,NA,NA,NA,NA,"stop","V37G K87G G155*",3
"lib2","SARS-CoV-2","ACAAATGTGGCCACGT",21,121.12,6,-4.84,1.44,1.5,1.12,0,">1 nonsynonymous","S43C F99V K132T C158L",4
"lib2","SARS-CoV-2","ACAAATTAAAAAGAAT",8,25.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9M Q84H V103T Y159D Q168L",5
"lib2","SARS-CoV-2","ACAAATTAAGTGGCTG",6,145.48,9.87,-0.96,0.07,2.19,1.07,0,">1 nonsynonymous","R25S Y39E",2
"lib2","SARS-CoV-2","ACAAATTAATTTATAA",9,72.37,10.53,-0.3,0.04,2.91,1.1,0,">1 nonsynonymous","I138P V173R",2
"lib2","SARS-CoV-2","ACAAATTACACTATAC",4,7.04,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib2","SARS-CoV-2","ACAAATTACTACCCCT",2,9.88,NA,NA,NA,NA,NA,NA,"stop","G9R S45R E76K A89Y F99*",5
"lib2","SARS-CoV-2","ACAAATTATCCGTTGG",8,51.89,9.69,-1.14,0.07,2.06,1.08,0,">1 nonsynonymous","N1R F62M S139I",3
"lib2","SARS-CoV-2","ACAAATTATTGCCTGG",3,41.09,9.08,-1.75,0.05,2.86,1.15,0,">1 nonsynonymous","Y119V K128V",2
"lib2","SARS-CoV-2","ACAAATTCAAATTTAT",4,16.28,6.7,-4.14,0.45,1.5,1.14,0.02,">1 nonsynonymous","N4F W23M",2
"lib2","SARS-CoV-2","ACAAATTCCCGCGGTT",3,133.32,9.85,-0.98,0.06,2.22,1.05,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","ACAAATTCTGACGGTA",6,2.22,NA,NA,NA,NA,NA,NA,"stop","N1K F44T C61N G117* Y175M",5
"lib2","SARS-CoV-2","ACAAATTGATAGCATA",4,23.45,10.83,0,0.09,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAATTGCGTCTTAA",1,37.4,9.3,-1.54,0.1,2.22,1.05,0,">1 nonsynonymous","V37T P54N Y121A",3
"lib2","SARS-CoV-2","ACAAATTGTTACATAA",3,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L V52D I80R Y121I",4
"lib2","SARS-CoV-2","ACAAATTTACAAAATT",5,82.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F62L D112N E141L P149L V173A",5
"lib2","SARS-CoV-2","ACAAATTTATGTTGTC",6,46.28,6.71,-4.13,0.08,2.05,1.08,0,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","ACAAATTTGCCTAACT",7,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M A42N P54F N92G P149L",5
"lib2","SARS-CoV-2","ACAACAAAAGCTATAG",11,124.64,10.86,0.03,0.05,2.93,1.07,0,">1 nonsynonymous","T3I I138T",2
"lib2","SARS-CoV-2","ACAACAAAATACCGCA",8,0.32,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","ACAACAAACATCATCA",4,52.09,8.67,-2.16,0.09,2.96,1.08,0,">1 nonsynonymous","S113Q S200L",2
"lib2","SARS-CoV-2","ACAACAAATACCCAAG",9,2.41,NA,NA,NA,NA,NA,NA,"stop","D68I K94A Y175*",3
"lib2","SARS-CoV-2","ACAACAACAAATAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M K94N G101W P149Q",4
"lib2","SARS-CoV-2","ACAACAACAAATAAGG",3,13.35,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9L L95Q A145L",3
"lib2","SARS-CoV-2","ACAACAACCACTAGCA",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F R124S",2
"lib2","SARS-CoV-2","ACAACAACTCGGCGAC",18,156.04,6,-4.84,1.28,1.5,1.16,0,">1 nonsynonymous","Y21W Y119L D137L",3
"lib2","SARS-CoV-2","ACAACAACTTAGGGCG",21,209.83,9.31,-1.52,0.05,1.97,1.04,0,">1 nonsynonymous","Y35G N130E T140F F160T",4
"lib2","SARS-CoV-2","ACAACAAGAAGGTCCA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","R127F G146Y A192*",3
"lib2","SARS-CoV-2","ACAACAAGAATGCCAA",7,83.24,10.82,-0.02,0.05,2.9,1.12,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","ACAACAAGACGGCTAC",12,9.26,10.48,-0.35,0.47,2.08,1,0.07,">1 nonsynonymous","N1T W106H T140E V173S",4
"lib2","SARS-CoV-2","ACAACAAGAGCGACCA",8,65.12,7.61,-3.23,0.26,1.5,1.14,0.02,">1 nonsynonymous","A18L E141K E186Y K198A",4
"lib2","SARS-CoV-2","ACAACAAGCGTCCAAA",13,39.2,7.12,-3.72,0.44,1.5,1.18,0.05,">1 nonsynonymous","G9R F47T S69N T85M V103Y E141R T148L",7
"lib2","SARS-CoV-2","ACAACAAGTAAGAAGT",4,37.07,9.43,-1.4,0.15,1.71,1.08,0.01,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","ACAACAATAAAGGTTT",3,0.79,NA,NA,NA,NA,NA,NA,"stop","K26T S43L G101C W106S K198*",5
"lib2","SARS-CoV-2","ACAACAATAACAGAAT",1,6.94,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","P82N D90C L183E",3
"lib2","SARS-CoV-2","ACAACAATACCCGTCA",1,30.01,9.75,-1.08,0.1,2.04,1.04,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","ACAACAATCGACGAGT",6,73.46,9.02,-1.82,0.15,1.5,1.07,0.01,">1 nonsynonymous","T3N S19L",2
"lib2","SARS-CoV-2","ACAACAATCTATGGAA",13,312.51,10.18,-0.66,0.02,2.85,1.02,0,">1 nonsynonymous","Y39L S45V Y178V",3
"lib2","SARS-CoV-2","ACAACAATGTCTAACG",12,5.53,NA,NA,NA,NA,NA,NA,"stop","C61* G86T L95R I138E",4
"lib2","SARS-CoV-2","ACAACACAAGGTACCT",10,173.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9R I88Y N107Y Y119L",4
"lib2","SARS-CoV-2","ACAACACACCGCACTG",8,98.11,10.81,-0.03,0.07,2.8,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACACAGACGATTA",12,249.96,10.79,-0.05,0.04,2.9,1.11,0,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","ACAACACAGGAAGTGA",11,181.92,10.84,0.01,0.05,2.95,1.08,0,"1 nonsynonymous","S184T",1
"lib2","SARS-CoV-2","ACAACACATAAACTCA",3,17.77,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V71R K114D",2
"lib2","SARS-CoV-2","ACAACACATATATTCT",23,470.44,10.84,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACACATGCAAGCG",2,1.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","ACAACACCAAACCCTA",8,69.1,8.33,-2.5,0.15,2.66,1.04,0.01,">1 nonsynonymous","F62Y Q84I Y175S",3
"lib2","SARS-CoV-2","ACAACACCGGGCCACG",5,37.17,10.19,-0.65,0.06,2.87,1.05,0,">1 nonsynonymous","T140I T148P",2
"lib2","SARS-CoV-2","ACAACACCTGGATCTG",5,85.37,10.26,-0.58,0.04,2.95,1.01,0,">1 nonsynonymous","V37A F47T N120S",3
"lib2","SARS-CoV-2","ACAACACGCCGATCTA",4,23.49,9.04,-1.8,0.08,2.82,1.12,0,">1 nonsynonymous","D90H T170K",2
"lib2","SARS-CoV-2","ACAACACGGCTATATT",7,94.25,10.84,0,0.04,2.93,1.08,0,">1 nonsynonymous","N151R L188M",2
"lib2","SARS-CoV-2","ACAACACGTAAATAAT",6,62.75,9.36,-1.48,0.07,2.79,1.14,0,">1 nonsynonymous","L122R G146V",2
"lib2","SARS-CoV-2","ACAACACGTAACATGC",5,44.44,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V77N G116F E135H",3
"lib2","SARS-CoV-2","ACAACACGTTGTCCAA",2,40.6,9.77,-1.06,0.09,2.08,1.02,0,">1 nonsynonymous","S41P Y91V",2
"lib2","SARS-CoV-2","ACAACACTACATTTTA",3,53.55,10.86,0.02,0.03,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACACTATGTCAGT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1E I80N T140A",3
"lib2","SARS-CoV-2","ACAACACTTCCCAAAG",14,58.3,9.57,-1.26,0.06,1.92,1.09,0,">1 nonsynonymous","L5R C102V P149V",3
"lib2","SARS-CoV-2","ACAACACTTTAGCAAG",5,25.74,9.25,-1.58,0.23,1.88,1.05,0.01,">1 nonsynonymous","R136S N151P",2
"lib2","SARS-CoV-2","ACAACAGAAGCCGATT",15,63.91,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","P7F G152Y V182Q",3
"lib2","SARS-CoV-2","ACAACAGACACGCCGT",13,205.18,10.82,-0.02,0.06,2.91,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACAGACATGTGAA",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I C49G P96L K128Y",4
"lib2","SARS-CoV-2","ACAACAGATTCCGCCA",9,125.61,6,-4.84,1.05,1.5,1.14,0.01,">1 nonsynonymous","V11P T55S D68V C102M R136G T148K T201C",7
"lib2","SARS-CoV-2","ACAACAGCGACACCGT",1,84.64,10.69,-0.15,0.04,2.9,1.07,0,">1 nonsynonymous","N4H N151S",2
"lib2","SARS-CoV-2","ACAACAGCGCGAATGT",1,34.57,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","D68V I104V D112V C150K G172L",5
"lib2","SARS-CoV-2","ACAACAGCTTGAATAA",2,32.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40G L131R Y143N F167N",4
"lib2","SARS-CoV-2","ACAACAGGCAGTTAGA",2,8.77,9.89,-0.95,0.22,2.27,1,0.01,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","ACAACAGGGTCTAAGA",3,70.83,10.13,-0.7,0.05,3,1.01,0,">1 nonsynonymous","D97V G166S",2
"lib2","SARS-CoV-2","ACAACAGGTATCACAG",21,185.4,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F44I G51D I104Y F134D",4
"lib2","SARS-CoV-2","ACAACAGTCAAGAAAC",3,37.99,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","Q79R Y143S V181C",3
"lib2","SARS-CoV-2","ACAACAGTCTGCACCG",13,113.69,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L60V A105K N130D E141A Y165K Q176R",6
"lib2","SARS-CoV-2","ACAACAGTGTCCCATT",4,97.66,10.89,0.05,0.06,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAACAGTTCAAGTAG",2,20.18,8.44,-2.4,0.12,2.7,1.08,0.01,">1 nonsynonymous","Q79K T170N",2
"lib2","SARS-CoV-2","ACAACATAAACGATAG",3,30.11,9.87,-0.96,0.1,2.47,1,0.01,">1 nonsynonymous","K56P L57F E141K",3
"lib2","SARS-CoV-2","ACAACATAACGGTCAC",10,129.26,10.83,0,0.06,2.83,1.05,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","ACAACATACGAATAAA",10,129.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y35R L162D",2
"lib2","SARS-CoV-2","ACAACATACGCGAATT",9,53.65,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K56W R124H R136M",3
"lib2","SARS-CoV-2","ACAACATATAAAACTA",4,0.68,NA,NA,NA,NA,NA,NA,"stop","S41* T85I S200M",3
"lib2","SARS-CoV-2","ACAACATATCCGAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A81T E154G L183*",3
"lib2","SARS-CoV-2","ACAACATATTGTTCAG",1,7.12,NA,NA,NA,NA,NA,NA,"stop","P82K F126R T140* C150R",4
"lib2","SARS-CoV-2","ACAACATGAGTTACCA",1,13.82,8.2,-2.64,0.23,1.58,1.14,0.02,">1 nonsynonymous","E10F C31V N58L N130L",4
"lib2","SARS-CoV-2","ACAACATGGACACGGA",2,51.21,10.59,-0.25,0.03,2.89,1.09,0,">1 nonsynonymous","A33Y E141H",2
"lib2","SARS-CoV-2","ACAACATGGTTATTCC",4,52.2,8.59,-2.24,0.1,1.62,1.07,0.01,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","ACAACATTGAATAAAC",13,109.93,10.82,-0.01,0.04,2.94,1.06,0,">1 nonsynonymous","R27T D97L",2
"lib2","SARS-CoV-2","ACAACATTTTACAGAG",3,53.27,10.48,-0.35,0.05,2.97,1,0,">1 nonsynonymous","D98E K128L",2
"lib2","SARS-CoV-2","ACAACATTTTGCCATC",5,3.46,NA,NA,NA,NA,NA,NA,"stop","C6S S29L C195S K199*",4
"lib2","SARS-CoV-2","ACAACCAAACCACTTA",6,58.04,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F47Y A89K",2
"lib2","SARS-CoV-2","ACAACCAAGAGTTCTA",4,24.21,10.84,0,0.08,2.95,1.1,0,">1 nonsynonymous","I2Y G9Q N130F N171Y",4
"lib2","SARS-CoV-2","ACAACCAAGGCTGTCT",7,76.75,10.13,-0.71,0.07,2.32,1,0,">1 nonsynonymous","F44L G83E T140S",3
"lib2","SARS-CoV-2","ACAACCAATCAGGTCA",7,53.87,10.78,-0.06,0.07,2.88,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAACCAATGAAAGCA",2,67.27,7.5,-3.34,0.29,1.5,1.1,0.02,">1 nonsynonymous","G86D D98G",2
"lib2","SARS-CoV-2","ACAACCAATTGATAAA",13,130.15,6.06,-4.78,0.63,1.5,1.15,0.01,">1 nonsynonymous","E10M V20M D90T N171S",4
"lib2","SARS-CoV-2","ACAACCACGGACCTGA",15,262.59,10.76,-0.08,0.04,2.93,1.08,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","ACAACCAGCAATAAAA",3,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y T63S G86L W106R P133I G155Y",6
"lib2","SARS-CoV-2","ACAACCAGCACCCAAG",9,94.31,10.83,0,0.05,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACCAGCGAACGAT",2,42.39,9.46,-1.37,0.11,2.44,1.11,0.01,">1 nonsynonymous","T55V T140M G155F",3
"lib2","SARS-CoV-2","ACAACCAGTTACGATA",4,65.94,10.68,-0.16,0.03,2.86,1.11,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","ACAACCATATTACTTA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S41R A81S K114*",3
"lib2","SARS-CoV-2","ACAACCATCTGTGACA",6,49.5,6.16,-4.67,0.8,1.5,1.19,0.02,">1 nonsynonymous","W106R S113M T201M",3
"lib2","SARS-CoV-2","ACAACCATTAAACAAG",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64C N120G S200L",3
"lib2","SARS-CoV-2","ACAACCATTACCCTTG",3,29.14,10.89,0.06,0.05,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACCCACAAACCGT",8,108.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39L F44I V103N D112E N130L",5
"lib2","SARS-CoV-2","ACAACCCCCCACCTTT",5,29.54,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T63H I88G G172A",3
"lib2","SARS-CoV-2","ACAACCCCTCAAAGAA",7,11.61,10.37,-0.46,0.37,2.41,1,0.04,">1 nonsynonymous","D90Y S139L F167T",3
"lib2","SARS-CoV-2","ACAACCCGCTCGACAT",2,38.82,10.75,-0.09,0.04,2.93,1.08,0,">1 nonsynonymous","T46Y S53F",2
"lib2","SARS-CoV-2","ACAACCCTACCGAAAA",7,101.78,10.53,-0.31,0.06,2.87,1.05,0,"1 nonsynonymous","F185I",1
"lib2","SARS-CoV-2","ACAACCCTACTAGGCC",1,76.24,10.79,-0.05,0.07,2.92,1.09,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","ACAACCCTCGTACTTT",2,50.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9H I28N Y93F P133T T201L",5
"lib2","SARS-CoV-2","ACAACCCTGAGATAAT",1,22.38,6,-4.84,1.76,1.5,1.19,0.04,">1 nonsynonymous","A14K K114A T140R C158S",4
"lib2","SARS-CoV-2","ACAACCCTTCCTAGGT",8,36.27,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P82S G116H P149L",3
"lib2","SARS-CoV-2","ACAACCGACATATGAT",1,42.78,10.17,-0.67,0.05,2.89,1.05,0,">1 nonsynonymous","K114R K132Y E141S T148I",4
"lib2","SARS-CoV-2","ACAACCGACGAATTAT",14,35.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G101W T201L",2
"lib2","SARS-CoV-2","ACAACCGAGCCTACAA",2,5.87,9.59,-1.24,0.11,2.78,1.03,0,">1 nonsynonymous","S41I I142P F185Y",3
"lib2","SARS-CoV-2","ACAACCGATCAGAAGT",4,44.34,10.84,0,0.06,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACCGCAGAAAATT",4,18.23,6,-4.84,2,1.5,1.05,0.04,">1 nonsynonymous","I72N G146A",2
"lib2","SARS-CoV-2","ACAACCGCTAAAACTT",2,53.06,10.86,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACCGGACACTAAT",8,110.46,10.56,-0.28,0.03,2.93,1.04,0,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","ACAACCGTAAAACTCG",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E L183P",2
"lib2","SARS-CoV-2","ACAACCTAACATTAAT",6,24.3,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G83M V103A P149Q",3
"lib2","SARS-CoV-2","ACAACCTACATGTTGA",6,180.48,10.83,-0.01,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACCTACTACTTAT",2,20.42,8.75,-2.09,0.1,2.36,1,0,">1 nonsynonymous","T63R R73I P197R",3
"lib2","SARS-CoV-2","ACAACCTCAAGCATAA",1,113.5,10.01,-0.83,0.07,2.68,1.07,0,">1 nonsynonymous","F8Y G51K D90N Y121L",4
"lib2","SARS-CoV-2","ACAACCTGCCATTGAA",7,66.93,9.98,-0.85,0.08,2.58,1.05,0,"1 nonsynonymous","I28G",1
"lib2","SARS-CoV-2","ACAACCTGTGCTTGAA",2,15.72,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","K94W G101M",2
"lib2","SARS-CoV-2","ACAACCTTATTTAAAA",13,4.53,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","ACAACCTTCCGGATTC",6,114.61,10.86,0.02,0.05,2.97,1.04,0,">1 nonsynonymous","R27C S36D",2
"lib2","SARS-CoV-2","ACAACCTTGCCATAGG",4,25.66,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N4T Y35K Y93N F156I",4
"lib2","SARS-CoV-2","ACAACGAAAAATAAAT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","P7*",1
"lib2","SARS-CoV-2","ACAACGAATTACGAAG",1,7.41,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","P7L R16P P82T P96G Y143A",5
"lib2","SARS-CoV-2","ACAACGACAATCACAA",9,160.75,10.52,-0.31,0.05,2.9,1.08,0,">1 nonsynonymous","G9R V37L F47I C61R S200E",5
"lib2","SARS-CoV-2","ACAACGACAGCACCAT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25Q V103I T201G",3
"lib2","SARS-CoV-2","ACAACGACCGATGTTC",10,181.32,6,-4.84,2,1.5,1.35,0.03,">1 nonsynonymous","C102R F167K Y178I",3
"lib2","SARS-CoV-2","ACAACGACTTAAGTGT",20,370.74,10.64,-0.2,0.02,2.95,1.05,0,"1 nonsynonymous","V65G",1
"lib2","SARS-CoV-2","ACAACGAGTAAGTTAG",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W F167I V173Q",3
"lib2","SARS-CoV-2","ACAACGATAAGTCTGC",2,6.9,6.12,-4.72,1.84,3,1.04,0,">1 nonsynonymous","T55P E135M N157I",3
"lib2","SARS-CoV-2","ACAACGATACGATGCA",4,12.38,8.85,-1.99,0.44,1.5,1.18,0.07,">1 nonsynonymous","N1H P96L",2
"lib2","SARS-CoV-2","ACAACGATATAACTTA",4,31.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I88A P177L",2
"lib2","SARS-CoV-2","ACAACGATCGCCGTCT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","K56S V71* S164I",3
"lib2","SARS-CoV-2","ACAACGCAAGGTCTAA",3,17.43,10.55,-0.29,0.1,2.81,1.01,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","ACAACGCAATTAATTG",3,12.51,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","D90V R127L V153M Q168K",4
"lib2","SARS-CoV-2","ACAACGCATGAAATCT",12,112.07,10.74,-0.1,0.05,2.95,1.06,0,">1 nonsynonymous","A22N F62V",2
"lib2","SARS-CoV-2","ACAACGCCTAACTAGT",16,207.87,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","L5S S36E S41H A105D Y121L Q176A H189C",7
"lib2","SARS-CoV-2","ACAACGCGTCATAATA",4,72.46,9.86,-0.98,0.06,2.64,1,0,">1 nonsynonymous","C6I V37T N110M",3
"lib2","SARS-CoV-2","ACAACGCGTTTTTCAA",1,6.14,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","N13K R25G S41V N120F",4
"lib2","SARS-CoV-2","ACAACGCTCATGCAAT",1,17.8,10.79,-0.05,0.04,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACGCTGTTCCCTG",7,85.25,6.17,-4.66,0.54,1.5,1.17,0.01,">1 nonsynonymous","V20G T55G R136D F156I P197Q",5
"lib2","SARS-CoV-2","ACAACGCTTCTAAAAT",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L D34S A105R S113K N120P",5
"lib2","SARS-CoV-2","ACAACGGAGAGGACGG",3,31.68,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S45P L95M D137Y N157A",4
"lib2","SARS-CoV-2","ACAACGGCCACACAGG",9,26.82,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","L5S L57P G74K R127S",4
"lib2","SARS-CoV-2","ACAACGGCTACAGGTT",1,10.34,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","I2F A18W P96Y",3
"lib2","SARS-CoV-2","ACAACGGTAAACAGTC",5,10.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y F8Y D90E C102N",4
"lib2","SARS-CoV-2","ACAACGGTCAGTAGAA",4,10.51,9.63,-1.21,0.17,2.81,1.22,0,">1 nonsynonymous","Y50I K132T",2
"lib2","SARS-CoV-2","ACAACGGTGAGCCAAA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S C61N K94S S139Y S147F",5
"lib2","SARS-CoV-2","ACAACGTAAGTATCCA",1,25.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L111I K114T N120E V180H",4
"lib2","SARS-CoV-2","ACAACGTATAGATTAT",2,25.8,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","S29M A89H C102E F156S",4
"lib2","SARS-CoV-2","ACAACGTCAATAAACG",2,11.4,10.85,0.02,0.08,3,1.01,0,">1 nonsynonymous","T148A Q163A",2
"lib2","SARS-CoV-2","ACAACGTCTCATTGAG",18,93.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95A",1
"lib2","SARS-CoV-2","ACAACGTGACATAATG",8,67.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14D T85S N92K W106F Y143A",5
"lib2","SARS-CoV-2","ACAACGTGAGATTACT",3,6.69,6,-4.84,2,3,1.36,0.02,">1 nonsynonymous","T3W S113W L125P C158N V173I T201R",6
"lib2","SARS-CoV-2","ACAACGTGATTGAGAG",5,26.84,9.75,-1.09,0.11,1.78,1.08,0.01,">1 nonsynonymous","F12S A33N",2
"lib2","SARS-CoV-2","ACAACTAAACAATTAG",6,27.37,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T63C G101A E141M G146F H189D",5
"lib2","SARS-CoV-2","ACAACTAAAGACTCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146F S184I",2
"lib2","SARS-CoV-2","ACAACTAAAGGACTGT",5,51.41,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S43C G86K",2
"lib2","SARS-CoV-2","ACAACTAAAGTATTTC",30,249.48,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K94D G101V E141G F156S",4
"lib2","SARS-CoV-2","ACAACTAACAAACTAG",19,276.8,10.4,-0.43,0.05,2.91,1.05,0,">1 nonsynonymous","K87H G116R L188V",3
"lib2","SARS-CoV-2","ACAACTAACCACACAA",4,26.77,10.34,-0.49,0.06,2.94,1,0,">1 nonsynonymous","N30K S129I",2
"lib2","SARS-CoV-2","ACAACTAACCTTGATC",1,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52R V71K A89N N107G",4
"lib2","SARS-CoV-2","ACAACTAAGGTATAAA",5,76.06,10.86,0.03,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACTAATTATAGAC",7,116.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168H",1
"lib2","SARS-CoV-2","ACAACTACACACAGAA",1,11.89,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","V11K A33K S45T S113Y T140K",5
"lib2","SARS-CoV-2","ACAACTACCGCAAAAA",2,63.49,8.48,-2.36,0.11,2.79,1.08,0.01,">1 nonsynonymous","Y93F Y119D",2
"lib2","SARS-CoV-2","ACAACTACCGGCTATG",8,154.72,10.65,-0.19,0.04,2.95,1.02,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","ACAACTACGTGGCTAG",8,62.97,6,-4.84,1.12,1.5,1.15,0.01,">1 nonsynonymous","S113K C158N S184V",3
"lib2","SARS-CoV-2","ACAACTACTGAAACAA",2,39.48,8.06,-2.77,0.31,1.85,1.23,0.03,">1 nonsynonymous","C6T L38I F44V N118L",4
"lib2","SARS-CoV-2","ACAACTACTTCCGCGT",5,52.95,6.68,-4.16,0.51,1.5,1.12,0.04,">1 nonsynonymous","F99Y Q176R V182Y S200K",4
"lib2","SARS-CoV-2","ACAACTAGGAAAAATA",3,60.25,10.01,-0.83,0.1,2.33,1.1,0,">1 nonsynonymous","V52R L188M",2
"lib2","SARS-CoV-2","ACAACTAGGCTATTAG",7,90.57,10.81,-0.02,0.05,2.89,1.11,0,"1 nonsynonymous","N120G",1
"lib2","SARS-CoV-2","ACAACTATACAATAAC",1,9.57,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","C6L A14Y C61T D97S N107I",5
"lib2","SARS-CoV-2","ACAACTATACACACTG",16,107.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9K G101L",2
"lib2","SARS-CoV-2","ACAACTATACGCCAAA",4,119.9,10.84,0,0.04,2.94,1.07,0,"1 nonsynonymous","A42K",1
"lib2","SARS-CoV-2","ACAACTATAGCTACAT",4,56.05,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","R25G K87R N151R Y159A",4
"lib2","SARS-CoV-2","ACAACTATCGACGTGA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","F17T Y50* D90N G174E S200V",5
"lib2","SARS-CoV-2","ACAACTATGAAAGATG",1,13.11,10.01,-0.83,0.09,2.41,1.01,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","ACAACTCAATAATCTA",6,15.5,6.53,-4.31,0.58,1.5,1.26,0.03,">1 nonsynonymous","D90N F99V K114W N171I",4
"lib2","SARS-CoV-2","ACAACTCAATCCGTCG",3,20.8,9.97,-0.86,0.1,2.64,1.03,0.01,">1 nonsynonymous","S43P P54S G152V",3
"lib2","SARS-CoV-2","ACAACTCACCACTCTT",2,50.26,9.7,-1.14,0.21,1.75,1.1,0.02,">1 nonsynonymous","D97V N107T K128G",3
"lib2","SARS-CoV-2","ACAACTCAGAAGTACT",9,20.84,6.04,-4.79,0.5,3,1.15,0.01,">1 nonsynonymous","P96L G116R",2
"lib2","SARS-CoV-2","ACAACTCAGAATAAAT",4,10.53,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","P96I A105G",2
"lib2","SARS-CoV-2","ACAACTCAGATTTTAA",7,66.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T85M P149S L162E",3
"lib2","SARS-CoV-2","ACAACTCAGGCAGTGG",12,34.49,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G101D G116R G174L",3
"lib2","SARS-CoV-2","ACAACTCATCTACTAC",7,76.38,8.64,-2.19,0.11,2.45,1.1,0,">1 nonsynonymous","C6G L60H E154Y",3
"lib2","SARS-CoV-2","ACAACTCCAAACTGGA",10,63.29,10.02,-0.81,0.06,2.99,1.01,0,">1 nonsynonymous","G9W A14T V37L K87L",4
"lib2","SARS-CoV-2","ACAACTCCCCATGAGG",1,38.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G74C L122T Y175T",3
"lib2","SARS-CoV-2","ACAACTCGGCCAGAGC",10,132.74,10.76,-0.08,0.06,2.88,1.06,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","ACAACTCGTTTGATCT",3,87.4,9.87,-0.97,0.11,2.09,1,0.01,">1 nonsynonymous","R136S V153W",2
"lib2","SARS-CoV-2","ACAACTCTAGGAACAA",3,11.15,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","G83S Y121Q D137T",3
"lib2","SARS-CoV-2","ACAACTCTCAAGTTTA",3,0.17,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","ACAACTGAAACACGCA",10,140.51,10.63,-0.2,0.06,2.89,1.07,0,">1 nonsynonymous","K48I L131V H189N",3
"lib2","SARS-CoV-2","ACAACTGAAAGACGAA",9,130.42,10.51,-0.33,0.02,2.94,1.06,0,">1 nonsynonymous","T15N T201W",2
"lib2","SARS-CoV-2","ACAACTGAAATACTCA",10,98.03,9.52,-1.31,0.11,1.74,1.09,0.01,">1 nonsynonymous","N40H T100A S139L",3
"lib2","SARS-CoV-2","ACAACTGATTTTTAGC",2,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129P P191L",2
"lib2","SARS-CoV-2","ACAACTGCAAGGATGG",5,32.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D59W Y93P",2
"lib2","SARS-CoV-2","ACAACTGGCATGTCCA",1,35.39,10.86,0.03,0.04,3,1,0,"1 nonsynonymous","Y39F",1
"lib2","SARS-CoV-2","ACAACTGTAACATTGT",1,23.36,10.68,-0.15,0.06,3,1.03,0,">1 nonsynonymous","G83Y S147I",2
"lib2","SARS-CoV-2","ACAACTTAATTTTGTA",8,73.79,10.9,0.07,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAACTTAGCATTGAT",6,3.59,NA,NA,NA,NA,NA,NA,"stop","V32* C49S G146V",3
"lib2","SARS-CoV-2","ACAACTTAGCTCGCCG",4,11.08,9.9,-0.93,0.35,1.89,1.11,0.04,">1 nonsynonymous","A42H P54T V180A",3
"lib2","SARS-CoV-2","ACAACTTCAACAGACA",11,185.26,10.08,-0.75,0.08,2.68,1.04,0,">1 nonsynonymous","A33L D59A P96N",3
"lib2","SARS-CoV-2","ACAACTTCCACAAATA",6,15.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2Y N13Y F70L Y91P",4
"lib2","SARS-CoV-2","ACAACTTCTTGTTGTG",19,103.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5Q R16F G83P",3
"lib2","SARS-CoV-2","ACAACTTTAAACACCT",4,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S N107A",2
"lib2","SARS-CoV-2","ACAACTTTAATAAGTT",11,37.07,6,-4.84,2,3,1.41,0.01,">1 nonsynonymous","T15C G101M D112Y",3
"lib2","SARS-CoV-2","ACAACTTTCGATTAAA",6,9.83,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S19K D34N G86L E154N L183C",5
"lib2","SARS-CoV-2","ACAACTTTCGTTTCAG",5,39.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44G L131R",2
"lib2","SARS-CoV-2","ACAACTTTTCATTACG",8,66.39,6.1,-4.73,1,1.5,1.22,0.02,">1 nonsynonymous","F99A V173Q",2
"lib2","SARS-CoV-2","ACAACTTTTGCCTATG",1,60.46,10.78,-0.05,0.05,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGAAAAAATTATT",8,36.09,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","W106R P161D",2
"lib2","SARS-CoV-2","ACAAGAAAAATACCTC",2,76.34,10.1,-0.74,0.05,2.48,1,0,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","ACAAGAAAAATGGGTG",4,115.83,10.76,-0.07,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAAGAAAACACATGC",9,70.13,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G9R S19C P161G",3
"lib2","SARS-CoV-2","ACAAGAAAACGAAGGC",2,37.43,10.84,0.01,0.06,3,1.03,0,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","ACAAGAAAAGTACTGT",5,64.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K87R D97V V103L Q163A Q168I",5
"lib2","SARS-CoV-2","ACAAGAAAATGCGATG",1,5.57,11.17,0.34,0.07,2.84,1.18,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","ACAAGAAAATTAATAC",2,113.67,10.8,-0.03,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGAAACTACTGAG",7,92.29,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K94Q N107F A145C G152I",4
"lib2","SARS-CoV-2","ACAAGAAAGAAACAAT",4,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K A14G I104A R136L T148Y",5
"lib2","SARS-CoV-2","ACAAGAAAGTATAAGT",5,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y C158D Y175G V182R A190E K199G",6
"lib2","SARS-CoV-2","ACAAGAAAGTTGAGGA",5,116.59,10.23,-0.61,0.05,2.68,1.06,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","ACAAGAAATCGAATCC",5,54.71,6,-4.84,0.8,3,1.12,0,">1 nonsynonymous","K56L C150G",2
"lib2","SARS-CoV-2","ACAAGAACAAGTTTAG",4,0.14,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib2","SARS-CoV-2","ACAAGAACATTATGAG",2,13.92,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T85Y P96L C102L",3
"lib2","SARS-CoV-2","ACAAGAACCCGAATAA",2,6.81,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","I88R P96N V103F S164D",4
"lib2","SARS-CoV-2","ACAAGAACCGGATTTT",15,204.82,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A14L G83P A89D Q176M",4
"lib2","SARS-CoV-2","ACAAGAACGCAATAAA",4,0.25,NA,NA,NA,NA,NA,NA,"stop","N1* L57H",2
"lib2","SARS-CoV-2","ACAAGAAGCATCATAT",2,33.48,9.46,-1.38,0.12,2.55,1.11,0.01,">1 nonsynonymous","S43N K48H V65S",3
"lib2","SARS-CoV-2","ACAAGAAGCCCAGAAT",1,6,9.9,-0.94,0.48,2.3,1.36,0.03,">1 nonsynonymous","N13K K56C T201Q",3
"lib2","SARS-CoV-2","ACAAGAAGCGAAACCA",11,152.73,10.7,-0.14,0.03,2.9,1.1,0,">1 nonsynonymous","Y123S T201P",2
"lib2","SARS-CoV-2","ACAAGAAGCGAACAGT",6,84.94,9.37,-1.47,0.09,2.07,1.08,0,">1 nonsynonymous","I28T F160V",2
"lib2","SARS-CoV-2","ACAAGAAGGGGCTCCA",9,5.61,NA,NA,NA,NA,NA,NA,"stop","F47G C61T D90* D98K S129V Y143F",6
"lib2","SARS-CoV-2","ACAAGAATAAACCTAG",4,114.42,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","G172T",1
"lib2","SARS-CoV-2","ACAAGAATACAGACGT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N30A T201S",3
"lib2","SARS-CoV-2","ACAAGAATAGAAGGGG",3,5.4,NA,NA,NA,NA,NA,NA,"stop","S41H G116N T148*",3
"lib2","SARS-CoV-2","ACAAGAATATAACTTA",5,28.41,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","P7F G51W K128T E135S F167L",5
"lib2","SARS-CoV-2","ACAAGAATATACATTT",1,20.53,10.68,-0.16,0.07,2.92,1.11,0,">1 nonsynonymous","D98S P149L",2
"lib2","SARS-CoV-2","ACAAGAATATCCAAGT",1,38.26,8.54,-2.3,0.07,2.74,1.03,0,"1 nonsynonymous","S113R",1
"lib2","SARS-CoV-2","ACAAGAATCATGAAAA",8,2.02,NA,NA,NA,NA,NA,NA,"stop","F12R Y39* V77M E154V",4
"lib2","SARS-CoV-2","ACAAGAATGATAATAA",2,165,8.42,-2.41,0.08,2.41,1.08,0,">1 nonsynonymous","W106M F126T",2
"lib2","SARS-CoV-2","ACAAGAATGCCACATT",1,45.1,8.65,-2.18,0.06,2.75,1.07,0,">1 nonsynonymous","G116R G146R L187N",3
"lib2","SARS-CoV-2","ACAAGAATTCATCTAA",5,0,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib2","SARS-CoV-2","ACAAGACAAAAATGCG",1,4.05,NA,NA,NA,NA,NA,NA,"stop","S29E V103I G146S F160C G196*",5
"lib2","SARS-CoV-2","ACAAGACAACAACGAC",3,82.79,10.05,-0.78,0.07,2.68,1.01,0,">1 nonsynonymous","S41A F62H I88V",3
"lib2","SARS-CoV-2","ACAAGACAATATACCC",1,7.43,10.55,-0.29,0.14,2.52,1.37,0.01,">1 nonsynonymous","A42C D98G T201H",3
"lib2","SARS-CoV-2","ACAAGACACAGATAAA",8,148.14,10.69,-0.15,0.04,2.95,1.06,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","ACAAGACATCCAATAC",7,78.36,10.91,0.07,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGACATTCTATCT",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82I Y91R T201N",3
"lib2","SARS-CoV-2","ACAAGACCCTATAATT",8,12.64,6,-4.84,2,1.5,1.11,0.06,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","ACAAGACCCTTACATA",5,39.31,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L60K G152T V180A",3
"lib2","SARS-CoV-2","ACAAGACCTAGGTAAA",1,37.86,10.26,-0.57,0.05,2.96,1.05,0,">1 nonsynonymous","S41P K87M",2
"lib2","SARS-CoV-2","ACAAGACGCCGACAGA",5,72.52,10.71,-0.13,0.04,2.94,1.06,0,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","ACAAGACGTGAATTTG",1,20.35,10.89,0.05,0.11,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGACTGGGAACAA",3,10.52,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","D34C L60P P82V",3
"lib2","SARS-CoV-2","ACAAGAGACACGCGGG",2,19.39,10.7,-0.13,0.06,2.86,1.12,0,">1 nonsynonymous","C61R Q144S",2
"lib2","SARS-CoV-2","ACAAGAGACTGGGACA",4,5.1,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F62W W106S P177L L183T V194I",5
"lib2","SARS-CoV-2","ACAAGAGAGAATACCA",13,3.08,NA,NA,NA,NA,NA,NA,"stop","Y91* A105R",2
"lib2","SARS-CoV-2","ACAAGAGATTTGAATT",6,16.09,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L95G C102S G116S S164K P197S",5
"lib2","SARS-CoV-2","ACAAGAGCAAGTAAGC",5,17.48,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F44V Y50R A81L L131R T201P",5
"lib2","SARS-CoV-2","ACAAGAGCCCCACTCC",12,99.96,8.45,-2.39,0.23,1.5,1.03,0.03,">1 nonsynonymous","L5D E76V E135M",3
"lib2","SARS-CoV-2","ACAAGAGCGCATCCCT",4,34.31,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F8R F17G V65F F70R E141G",5
"lib2","SARS-CoV-2","ACAAGAGTCATTCCAT",12,135.48,7.07,-3.77,0.19,1.5,1.1,0.01,">1 nonsynonymous","W23G G116M T201R",3
"lib2","SARS-CoV-2","ACAAGATAAAAGATTG",3,37.65,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C6E Y66F I88S C102A",4
"lib2","SARS-CoV-2","ACAAGATAAGGTATAT",9,36.1,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L57S V103K",2
"lib2","SARS-CoV-2","ACAAGATAATAAAGTA",1,12.91,10.25,-0.59,0.1,2.8,1.19,0.01,">1 nonsynonymous","T3L N120S A145S",3
"lib2","SARS-CoV-2","ACAAGATAATGTTTCA",4,37.1,10.82,-0.02,0.07,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGATACTACATCC",12,134.25,10.18,-0.65,0.05,2.73,1.01,0,">1 nonsynonymous","N13E A22K S36R",3
"lib2","SARS-CoV-2","ACAAGATACTATACGC",2,48.69,9.81,-1.03,0.05,2.82,1.13,0,">1 nonsynonymous","T55A K128T P169F",3
"lib2","SARS-CoV-2","ACAAGATATACACCAA",7,58.63,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N4W S69G F99E",3
"lib2","SARS-CoV-2","ACAAGATCACCTACTG",3,145.64,10.06,-0.78,0.05,2.4,1.03,0,">1 nonsynonymous","K94S N110T",2
"lib2","SARS-CoV-2","ACAAGATCGCCTATAT",6,59.03,9.07,-1.76,0.14,1.56,1.11,0.01,">1 nonsynonymous","P7Q Y66L T85D R136L",4
"lib2","SARS-CoV-2","ACAAGATGAAATCATT",5,0.98,NA,NA,NA,NA,NA,NA,"stop","S36I L60M P133* E154Y Y178H",5
"lib2","SARS-CoV-2","ACAAGATGCCAGTAAC",4,84.52,6.76,-4.08,0.33,1.5,1.21,0.02,">1 nonsynonymous","S36F S45P I80M T201Q",4
"lib2","SARS-CoV-2","ACAAGATGGACGAGAT",9,138.35,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L57N D90S S113D Q176M",4
"lib2","SARS-CoV-2","ACAAGATGTAGCAAAT",1,15.49,9.5,-1.33,0.2,2.28,1.03,0.01,">1 nonsynonymous","Y35K T100E",2
"lib2","SARS-CoV-2","ACAAGATTACAAAGAC",2,7.06,6.02,-4.82,0.77,3,1.02,0.01,">1 nonsynonymous","A18P R25L T46S T85V G101V Q144R G174A",7
"lib2","SARS-CoV-2","ACAAGATTAGAGGCCG",3,30.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5S S113V F167R",3
"lib2","SARS-CoV-2","ACAAGATTCCTCGTTA",1,19.38,8.36,-2.48,0.36,1.5,1.04,0.05,">1 nonsynonymous","Y123S F156N Q168C",3
"lib2","SARS-CoV-2","ACAAGCAAGACTTGAA",6,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E I104H Y159D N171M",4
"lib2","SARS-CoV-2","ACAAGCAAGCCTTATG",3,57.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N110E Y121E R127F Q144S P177M",5
"lib2","SARS-CoV-2","ACAAGCAATTCAATGA",7,70.51,10.81,-0.02,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGCACAAAACGAG",9,125.13,10.07,-0.77,0.06,2.66,1.01,0,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","ACAAGCACATTGTGAA",3,66.17,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","I28V C61L R127V",3
"lib2","SARS-CoV-2","ACAAGCAGTAATCGGT",4,49.43,8.68,-2.16,0.07,2.61,1.07,0,">1 nonsynonymous","E135D P149N F156A G174W",4
"lib2","SARS-CoV-2","ACAAGCATATTCCGTT",3,22.38,10.66,-0.17,0.06,2.89,1.1,0,"1 nonsynonymous","F12I",1
"lib2","SARS-CoV-2","ACAAGCATCTACTAAC",3,53.02,6,-4.84,1.95,3,1.14,0,">1 nonsynonymous","R16G S108H G155A R179F",4
"lib2","SARS-CoV-2","ACAAGCATTACATAGC",2,11.87,10.85,0.01,0.06,2.94,1.09,0,">1 nonsynonymous","V32T T201K",2
"lib2","SARS-CoV-2","ACAAGCCAGCAATAAA",6,101.98,9.04,-1.79,0.05,2.92,1.13,0,">1 nonsynonymous","R27K S43C N157G",3
"lib2","SARS-CoV-2","ACAAGCCATCAAAATG",4,29.28,7.33,-3.5,0.35,1.5,1.08,0.04,">1 nonsynonymous","D90N N107W S200Q",3
"lib2","SARS-CoV-2","ACAAGCCATCTCCCCC",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H K26L Y39F",3
"lib2","SARS-CoV-2","ACAAGCCCCACTATTG",5,60.73,10.61,-0.23,0.05,3,1,0,">1 nonsynonymous","T140C G196R",2
"lib2","SARS-CoV-2","ACAAGCCCCTGTCGTA",15,3.74,NA,NA,NA,NA,NA,NA,"stop","C61* Q144K",2
"lib2","SARS-CoV-2","ACAAGCCCTTGGACTA",14,222.9,10.83,-0.01,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGCCCTTTAATCA",1,0.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145E",1
"lib2","SARS-CoV-2","ACAAGCCGAAAGAATA",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R L95V Y119S E141F",4
"lib2","SARS-CoV-2","ACAAGCCGCTATCGAA",7,3.37,NA,NA,NA,NA,NA,NA,"stop","A22V Y39* N120S",3
"lib2","SARS-CoV-2","ACAAGCCGGTCTCAAA",2,28.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y91R Y123P T140F",3
"lib2","SARS-CoV-2","ACAAGCCGTTAATATA",7,80.69,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F99V G117L G166I",3
"lib2","SARS-CoV-2","ACAAGCCTTAAGCCTT",27,688.6,10.51,-0.32,0.02,2.92,1.06,0,">1 nonsynonymous","Y39V V77I F160L",3
"lib2","SARS-CoV-2","ACAAGCCTTCCTGGAC",15,260.31,10.85,0.02,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGCGCCAACACAA",1,1.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","ACAAGCGGTGAGTTTG",3,46.02,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D34R D59S A67N Q144L",4
"lib2","SARS-CoV-2","ACAAGCTCAAAACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18V P149*",2
"lib2","SARS-CoV-2","ACAAGCTCATGCTAAT",4,30.64,7.44,-3.39,0.28,1.5,1.1,0.03,"1 nonsynonymous","L95A",1
"lib2","SARS-CoV-2","ACAAGCTCGACTAACG",3,12.12,6,-4.84,2,3,1.02,0,">1 nonsynonymous","S29W V52D T170P",3
"lib2","SARS-CoV-2","ACAAGCTGGGACCAAG",6,106.37,10.75,-0.08,0.04,2.94,1.08,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","ACAAGGAATAAACGAC",3,52.87,10.88,0.04,0.07,2.88,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAAGGAATTCTCTTG",7,60.07,8.3,-2.53,0.27,1.5,1.05,0.03,">1 nonsynonymous","N107V G116R",2
"lib2","SARS-CoV-2","ACAAGGACATTAATCT",8,109.72,10.12,-0.72,0.03,2.87,1.07,0,">1 nonsynonymous","C6T N64H A190R",3
"lib2","SARS-CoV-2","ACAAGGACGCGGAACT",2,43.23,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F44V Y93R T100K V173M",4
"lib2","SARS-CoV-2","ACAAGGACTACCTGAC",6,125.63,9.86,-0.97,0.09,2.36,1.05,0,">1 nonsynonymous","C6S D59S D97F",3
"lib2","SARS-CoV-2","ACAAGGACTTTCAAAC",1,27.99,9.44,-1.4,0.08,2.8,1.11,0,">1 nonsynonymous","I2D K26M D59T Q84K K132M F156S V173R",7
"lib2","SARS-CoV-2","ACAAGGAGATAAGGCA",1,34.17,10.65,-0.18,0.04,2.99,1,0,">1 nonsynonymous","S29N F47M",2
"lib2","SARS-CoV-2","ACAAGGAGTAATTACT",5,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19D I28M F126L K132M I142V",5
"lib2","SARS-CoV-2","ACAAGGATAAAAACAA",4,86.65,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y50T D68L D90S",3
"lib2","SARS-CoV-2","ACAAGGATGTATAGTT",6,29.29,8.4,-2.43,0.18,1.86,1.12,0.02,">1 nonsynonymous","T15L C31I V37L N64I S139K",5
"lib2","SARS-CoV-2","ACAAGGCATGAATCAT",6,105.42,10.57,-0.27,0.06,2.94,1.07,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","ACAAGGCCAAATATAT",2,11.61,10.35,-0.48,0.07,2.9,1.12,0,">1 nonsynonymous","R78H F156H",2
"lib2","SARS-CoV-2","ACAAGGCCATTCTGTC",2,13.45,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D90L P96F T100S E154L",4
"lib2","SARS-CoV-2","ACAAGGCCCAAAACTG",4,0.68,NA,NA,NA,NA,NA,NA,"stop","I2F V11A G101V I142* K199N",5
"lib2","SARS-CoV-2","ACAAGGCCCAAACAAC",2,40.99,6.4,-4.43,0.85,1.5,1.12,0.06,">1 nonsynonymous","C150G L162S",2
"lib2","SARS-CoV-2","ACAAGGCCTCAAGGCT",13,1.97,NA,NA,NA,NA,NA,NA,"stop","R16* N151V",2
"lib2","SARS-CoV-2","ACAAGGCTGGTAATAC",2,58.26,10.12,-0.72,0.07,2.77,1.02,0,">1 nonsynonymous","V11M G83R",2
"lib2","SARS-CoV-2","ACAAGGGAAACTAACA",4,68.14,8.46,-2.37,0.1,2.02,1.12,0,">1 nonsynonymous","K48N S139V T170M",3
"lib2","SARS-CoV-2","ACAAGGGACATATGTA",2,63.5,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y21L N40L Y159F",3
"lib2","SARS-CoV-2","ACAAGGGCCGATAGGG",4,44.97,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C61W G86L Y143S V181L",4
"lib2","SARS-CoV-2","ACAAGGGCTTTTGAAT",1,5.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48D I80N R127T",3
"lib2","SARS-CoV-2","ACAAGGGGAGTCCAAT",14,85.02,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y50N L95G T140V",3
"lib2","SARS-CoV-2","ACAAGGGGGATTCAAA",5,81.21,10.29,-0.54,0.03,2.86,1.05,0,">1 nonsynonymous","A89T D97A",2
"lib2","SARS-CoV-2","ACAAGGGTACTTCAGA",2,1.52,NA,NA,NA,NA,NA,NA,"stop","R25M A33* G116T",3
"lib2","SARS-CoV-2","ACAAGGGTGCAGGAGT",3,0.44,NA,NA,NA,NA,NA,NA,"stop","G9S P197*",2
"lib2","SARS-CoV-2","ACAAGGTAGGCTCTGG",1,27.34,6.08,-4.75,1.12,1.5,1.16,0.03,">1 nonsynonymous","R16V D112R N157R",3
"lib2","SARS-CoV-2","ACAAGGTCCCGACCGA",5,10.56,6,-4.84,2,1.5,1.19,0.08,">1 nonsynonymous","C6Y F99G Y123C S139H V153C",5
"lib2","SARS-CoV-2","ACAAGGTGTGTCTTGC",3,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y F62R V103E Y121T",4
"lib2","SARS-CoV-2","ACAAGTAAAGCCCTGA",10,236.66,10.22,-0.61,0.04,2.8,1.03,0,">1 nonsynonymous","L5A Y91A",2
"lib2","SARS-CoV-2","ACAAGTAACATCCACA",3,75.08,8.71,-2.12,0.07,2.76,1.07,0,">1 nonsynonymous","D90R Y143V V173D",3
"lib2","SARS-CoV-2","ACAAGTACACGAGACA",4,1.85,NA,NA,NA,NA,NA,NA,"stop","V37H P133*",2
"lib2","SARS-CoV-2","ACAAGTACCCATTTAA",4,90.51,10.76,-0.08,0.04,2.9,1.09,0,">1 nonsynonymous","R27M F160H",2
"lib2","SARS-CoV-2","ACAAGTACTGGACGGA",11,126.19,7.63,-3.21,0.29,1.5,1.06,0.03,">1 nonsynonymous","N24P P54G N64A N118S",4
"lib2","SARS-CoV-2","ACAAGTATAAAATCAA",30,137.63,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G83F K94L S139N Y143R",4
"lib2","SARS-CoV-2","ACAAGTCACCCATAGG",2,14.29,10.34,-0.49,0.08,2.71,1.21,0,">1 nonsynonymous","T3C S43I K114Y",3
"lib2","SARS-CoV-2","ACAAGTCACCTTTGTT",3,26.42,9.33,-1.5,0.05,2.87,1.06,0,">1 nonsynonymous","L5V K87L N118C",3
"lib2","SARS-CoV-2","ACAAGTCAGCAAAACG",4,53.54,9.22,-1.62,0.03,2.93,1.09,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ACAAGTCATCGCGAAC",5,31.05,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","N58Y D68K W106S S113F A145Y",5
"lib2","SARS-CoV-2","ACAAGTCCAACTACAA",2,26.65,10.13,-0.7,0.1,2.69,1.04,0,">1 nonsynonymous","A81V L122C S147Q",3
"lib2","SARS-CoV-2","ACAAGTCTAAGTTTAG",3,14.13,6.66,-4.17,0.35,2.44,1.21,0.02,"1 nonsynonymous","F99A",1
"lib2","SARS-CoV-2","ACAAGTCTGCCTCCCT",1,1.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180G",1
"lib2","SARS-CoV-2","ACAAGTGACTTTCCTG",9,62.08,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A89D G117S",2
"lib2","SARS-CoV-2","ACAAGTGAGCGCTAAA",4,87.02,10.7,-0.14,0.05,2.91,1.09,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","ACAAGTGATAATAGTG",2,14,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","R73G A81L Y123D",3
"lib2","SARS-CoV-2","ACAAGTGATACATCAT",3,13.46,NA,NA,NA,NA,NA,NA,"stop","A81* D98Y N151V",3
"lib2","SARS-CoV-2","ACAAGTGCGCGTACAG",1,23.64,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","A89T V103E T148D",3
"lib2","SARS-CoV-2","ACAAGTGTCAGCTTAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A14* C102V",2
"lib2","SARS-CoV-2","ACAAGTGTCTCTTTAT",1,21.37,6,-4.84,2,1.5,1.3,0.04,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","ACAAGTGTCTGCAACC",3,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R R16C C61E N107P",4
"lib2","SARS-CoV-2","ACAAGTTAACGACATT",4,39.28,10.64,-0.19,0.05,2.91,1.06,0,">1 nonsynonymous","T63F S129T",2
"lib2","SARS-CoV-2","ACAAGTTAATAAGCCA",8,75.98,9.89,-0.95,0.06,2.66,1.04,0,">1 nonsynonymous","L5M S108T Y121I",3
"lib2","SARS-CoV-2","ACAAGTTACCTAAAAA",10,180.02,6,-4.84,0.86,1.5,1.13,0,">1 nonsynonymous","K56S Y121F S129K C150S G166T",5
"lib2","SARS-CoV-2","ACAAGTTAGAGTCACA",9,366.46,10.67,-0.17,0.03,2.97,1.04,0,">1 nonsynonymous","A33P N58S Y143F K199I",4
"lib2","SARS-CoV-2","ACAAGTTATACTTGTC",2,32.76,10.46,-0.38,0.06,2.83,1.09,0,"1 nonsynonymous","G152W",1
"lib2","SARS-CoV-2","ACAAGTTATCCTTCGT",1,6.65,NA,NA,NA,NA,NA,NA,"stop","R27Q L38M D98F K114* P133* G146L V173W Y178D",8
"lib2","SARS-CoV-2","ACAAGTTATGCCATTT",4,40.78,8.08,-2.75,0.2,1.56,1.18,0.01,">1 nonsynonymous","C61L F167L",2
"lib2","SARS-CoV-2","ACAAGTTCAACACGAA",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S N120H G146N",3
"lib2","SARS-CoV-2","ACAAGTTCAATTCCAG",18,271.92,9.81,-1.03,0.03,2.84,1.1,0,"1 nonsynonymous","I142C",1
"lib2","SARS-CoV-2","ACAAGTTCTTCCCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8L Y39P I142*",3
"lib2","SARS-CoV-2","ACAAGTTGACAAAATA",1,49.18,9.54,-1.3,0.05,2.82,1.12,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ACAAGTTTGACGCTCG",5,14.81,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1K G86R Y121L T201Q",4
"lib2","SARS-CoV-2","ACAAGTTTGTCCTACC",1,17.25,6,-4.84,0.81,2.73,1.07,0,">1 nonsynonymous","G9V N107V G146I",3
"lib2","SARS-CoV-2","ACAAGTTTTATCGGCA",3,31.6,10.84,0,0.08,2.97,1.04,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","ACAATAAAAAAACTAC",4,35.83,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25F A33R G51L A105D G146R",5
"lib2","SARS-CoV-2","ACAATAAAAACACTAG",3,28.4,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N64D N107I Y119L C158D",4
"lib2","SARS-CoV-2","ACAATAAAAGAAATGA",7,2.04,NA,NA,NA,NA,NA,NA,"stop","N1S R25S Y39G L57N P96S P191R S200*",7
"lib2","SARS-CoV-2","ACAATAAAAGATGTGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G A18D N64W Y119R",4
"lib2","SARS-CoV-2","ACAATAAAAGTGTTCC",4,68.72,10.68,-0.15,0.03,2.9,1.12,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","ACAATAAAATATAGTA",4,33.35,10.53,-0.31,0.06,2.94,1.06,0,">1 nonsynonymous","T85A H189I",2
"lib2","SARS-CoV-2","ACAATAAAATATATTA",2,54.86,10.21,-0.63,0.05,2.82,1.17,0,"1 nonsynonymous","A67F",1
"lib2","SARS-CoV-2","ACAATAAAATTCTGGC",4,72.8,10.74,-0.1,0.03,2.94,1.07,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","ACAATAAACATAAGTC",2,5.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W D34H C49K",3
"lib2","SARS-CoV-2","ACAATAAACCCAATAA",4,31.02,6.3,-4.54,0.7,1.5,1.12,0.03,">1 nonsynonymous","G83T I104Y R124G",3
"lib2","SARS-CoV-2","ACAATAAAGAGTGAAT",12,60,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y66Q W106A D112M",3
"lib2","SARS-CoV-2","ACAATAAAGTTTCAAG",4,19.96,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","C49P",1
"lib2","SARS-CoV-2","ACAATAAATATGACCT",4,113.08,9.96,-0.87,0.09,2.41,1.07,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","ACAATAAATCATTAAT",15,75.42,7.32,-3.51,0.34,1.5,1.07,0.05,">1 nonsynonymous","T3K V77R R136C",3
"lib2","SARS-CoV-2","ACAATAAATTGCATCG",8,509.15,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S69L L122E R127I",3
"lib2","SARS-CoV-2","ACAATAAATTTTTTGT",16,4.34,NA,NA,NA,NA,NA,NA,"stop","Q176* Y178E",2
"lib2","SARS-CoV-2","ACAATAACAAGGCTTG",5,47.35,6,-4.84,0.86,1.5,1.2,0.01,">1 nonsynonymous","D137S F167L",2
"lib2","SARS-CoV-2","ACAATAACACCATATC",3,1.47,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","ACAATAACACGGGGAT",3,56.41,9.93,-0.91,0.06,2.74,1.02,0,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","ACAATAACCAAGAACT",7,59.33,10.51,-0.33,0.05,2.9,1.07,0,">1 nonsynonymous","G83Y F160L",2
"lib2","SARS-CoV-2","ACAATAAGAATATACA",6,56.45,9.73,-1.11,0.09,2.19,1.06,0,">1 nonsynonymous","T15L S36V G152T",3
"lib2","SARS-CoV-2","ACAATAAGAGATTCAT",1,42.86,10.81,-0.03,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATAAGCAAGTACT",5,53.76,6.26,-4.58,0.46,1.99,1.18,0.01,">1 nonsynonymous","R25G S43P E76T K128Q H189G",5
"lib2","SARS-CoV-2","ACAATAAGCATACATA",16,139.88,10.12,-0.71,0.07,2.68,1.01,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","ACAATAAGTATGACAG",2,22.82,7.95,-2.89,0.16,2.47,1,0.01,">1 nonsynonymous","T3A E154V Y159I",3
"lib2","SARS-CoV-2","ACAATAAGTGAGTAGG",13,106.55,8.59,-2.25,0.14,1.5,1.13,0.01,">1 nonsynonymous","R16Q D90S S139I P149R V153E",5
"lib2","SARS-CoV-2","ACAATAAGTTTGCCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G L60V",2
"lib2","SARS-CoV-2","ACAATAATCAAACTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","R27* K114S",2
"lib2","SARS-CoV-2","ACAATAATGCAATTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","F8K C61* N64K K94V C158I",5
"lib2","SARS-CoV-2","ACAATAATGCATCCCG",2,12,10.55,-0.28,0.05,2.94,1.06,0,">1 nonsynonymous","I142F K199V",2
"lib2","SARS-CoV-2","ACAATAATTCTCAACC",13,82.06,6.15,-4.69,0.97,1.5,1.25,0.03,">1 nonsynonymous","G74A D97T V103T",3
"lib2","SARS-CoV-2","ACAATAATTGATTTAT",3,28.26,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","C6V I88L F99S",3
"lib2","SARS-CoV-2","ACAATACAAAAACAAA",6,83.7,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","F17P A22E Y119V F134P T201D",5
"lib2","SARS-CoV-2","ACAATACAAAACTATT",11,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S N13M K48L N107L V181S",5
"lib2","SARS-CoV-2","ACAATACAAAATAGTG",1,87.93,10.35,-0.49,0.04,3,1.03,0,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","ACAATACAAGCAAGTG",6,102.58,9.79,-1.04,0.09,2.14,1.03,0,">1 nonsynonymous","Y35R I104C A190S",3
"lib2","SARS-CoV-2","ACAATACAAGTGAGAA",3,35.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R78C Y121M K132S Y159S",4
"lib2","SARS-CoV-2","ACAATACACAGCATAA",6,114.43,8.99,-1.85,0.04,2.93,1.08,0,">1 nonsynonymous","L60I Q168L",2
"lib2","SARS-CoV-2","ACAATACACGACATAG",7,181.81,10.79,-0.04,0.03,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATACACTTAGCAA",2,5.06,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","F12Y T15N D34Y S41V A105P G155H",6
"lib2","SARS-CoV-2","ACAATACCACCACCAA",6,50.02,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F12W C31K F99I W106Y",4
"lib2","SARS-CoV-2","ACAATACCACGTATTA",18,413.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D112S E154Y Q176L",3
"lib2","SARS-CoV-2","ACAATACCATATGATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L G86Q A105T N120V P161L",5
"lib2","SARS-CoV-2","ACAATACCGCCTCTAT",8,205.79,10.84,0,0.06,2.86,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATACCTAGGAAAG",4,34.46,10.84,0.01,0.03,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATACCTGCTGAAA",4,21.83,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L57P G146V",2
"lib2","SARS-CoV-2","ACAATACCTTTGTCCT",2,54.39,10.2,-0.64,0.08,2.66,1.02,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","ACAATACGCAATTTAA",5,35.56,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K114C L131R N171C",3
"lib2","SARS-CoV-2","ACAATACGGCCTACAC",2,77.08,9.97,-0.87,0.06,2.48,1.02,0,">1 nonsynonymous","D34P G83Q E141D",3
"lib2","SARS-CoV-2","ACAATACGGTTATTAA",6,89.16,10.56,-0.28,0.04,2.87,1.02,0,">1 nonsynonymous","V37F E135L",2
"lib2","SARS-CoV-2","ACAATACGTAACCGGG",3,23.86,10.32,-0.51,0.04,2.93,1,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","ACAATACTAACTAAAG",6,65.4,10.84,0.01,0.06,3,1.02,0,">1 nonsynonymous","V52F L188T",2
"lib2","SARS-CoV-2","ACAATACTACTTAGCG",13,6,NA,NA,NA,NA,NA,NA,"stop","Y91A Y123K G166*",3
"lib2","SARS-CoV-2","ACAATACTCACAGTTA",15,253.6,10.28,-0.56,0.03,2.96,1.05,0,">1 nonsynonymous","C6N A42G",2
"lib2","SARS-CoV-2","ACAATACTCTTCGCTG",9,44.57,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L95R S184Q",2
"lib2","SARS-CoV-2","ACAATAGAATAGCAGT",8,70.03,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","P7I G83N Q176R S184L",4
"lib2","SARS-CoV-2","ACAATAGACACGTGGG",10,1.41,NA,NA,NA,NA,NA,NA,"stop","Y66T A105R Y119* Y143E V153* P197S",6
"lib2","SARS-CoV-2","ACAATAGACGAAAGGA",2,12.2,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14C C49L N120R G155Y",4
"lib2","SARS-CoV-2","ACAATAGACTAAAAAA",5,155.46,8.44,-2.39,0.13,2.23,1.07,0.01,">1 nonsynonymous","T100D N120P",2
"lib2","SARS-CoV-2","ACAATAGAGTACCGAG",8,108.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N107G Y119T Y165R K199V",4
"lib2","SARS-CoV-2","ACAATAGATAAACCAG",5,0.11,NA,NA,NA,NA,NA,NA,"stop","N30S E141*",2
"lib2","SARS-CoV-2","ACAATAGATCTAAAAA",2,163.89,11.02,0.18,0.12,2.82,1.08,0,">1 nonsynonymous","A42S Q163V",2
"lib2","SARS-CoV-2","ACAATAGATTTATAAA",10,56.25,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D59P V103M",2
"lib2","SARS-CoV-2","ACAATAGCCGCAACAG",6,66.53,6.52,-4.32,0.35,1.5,1.14,0.01,">1 nonsynonymous","F8L G83T F156K Q163R V180T",5
"lib2","SARS-CoV-2","ACAATAGGTGAGCAAA",14,101.85,8.97,-1.87,0.16,1.66,1.08,0.01,">1 nonsynonymous","F8R P54I",2
"lib2","SARS-CoV-2","ACAATAGTGCAGACAG",10,95.14,10.85,0.02,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATAGTGTGTGTAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","V11L Y50L V77* F99E R136Q",5
"lib2","SARS-CoV-2","ACAATATAACGGTAGT",2,34.36,10.81,-0.02,0.04,3,1.01,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","ACAATATAACTAAACT",3,5.15,10.42,-0.42,0.33,1.85,1,0.04,">1 nonsynonymous","D34S W106M A145G",3
"lib2","SARS-CoV-2","ACAATATAACTGACCC",7,24.66,8.23,-2.6,0.33,1.5,1,0.06,"1 nonsynonymous","I104D",1
"lib2","SARS-CoV-2","ACAATATAATCACACG",3,20.16,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G51E N64K E154V P161Y",4
"lib2","SARS-CoV-2","ACAATATACAATCATA",1,61.9,8.26,-2.58,0.1,2.75,1.07,0.01,">1 nonsynonymous","R16P Y175N K199I",3
"lib2","SARS-CoV-2","ACAATATACAGTGTAA",3,50.76,10.85,0.01,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATATACATATCTT",1,7.9,10.91,0.07,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATATACCGTCGCC",13,206.39,10.3,-0.53,0.02,2.88,1.06,0,">1 nonsynonymous","D90V I104F",2
"lib2","SARS-CoV-2","ACAATATACTTATTAT",9,25.56,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F8V N58V Q84T Y93P F99A D112L",6
"lib2","SARS-CoV-2","ACAATATAGTACGTAA",19,146.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18F V32G L38N T100P",4
"lib2","SARS-CoV-2","ACAATATATTGACCAC",19,63.91,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C49N D59R F99Y",3
"lib2","SARS-CoV-2","ACAATATATTTACTAA",1,51.17,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3E I28P Y119F",3
"lib2","SARS-CoV-2","ACAATATCGAAGATAA",3,57.84,10.72,-0.12,0.03,2.88,1.14,0,">1 nonsynonymous","Y35L N40A P149E",3
"lib2","SARS-CoV-2","ACAATATGAAGTCAAG",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35W K128G",2
"lib2","SARS-CoV-2","ACAATATGATCGACAA",4,1.3,NA,NA,NA,NA,NA,NA,"stop","V77N R127* N157D",3
"lib2","SARS-CoV-2","ACAATATGCCTAATTA",1,30.46,10.21,-0.62,0.06,2.74,1.13,0,">1 nonsynonymous","K94H P191L",2
"lib2","SARS-CoV-2","ACAATATGGTAACCAT",1,40,7.55,-3.28,0.28,1.5,1.12,0.03,">1 nonsynonymous","S36P R78I D90H E154L",4
"lib2","SARS-CoV-2","ACAATATGTGGGCAAT",4,0.22,NA,NA,NA,NA,NA,NA,"stop","I2A T15S A42T A89T C102L S108W K132*",7
"lib2","SARS-CoV-2","ACAATATGTTAAAATA",1,5.98,10.83,-0.01,0.08,2.96,1,0,">1 nonsynonymous","S45K L60Y",2
"lib2","SARS-CoV-2","ACAATATTACACTTGA",7,35.56,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","E76S W106M Q144H G166N",4
"lib2","SARS-CoV-2","ACAATATTACAGGTAT",2,21.45,6,-4.84,2,3,1.05,0,">1 nonsynonymous","R25D N58T A67Y",3
"lib2","SARS-CoV-2","ACAATATTACCAAAAT",3,36.6,10.85,0.01,0.07,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATATTATTTTGGT",1,9.02,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L38R D59I S69G D90H",4
"lib2","SARS-CoV-2","ACAATATTCATTGATG",2,24.49,10.52,-0.31,0.06,2.89,1.04,0,"1 nonsynonymous","N107P",1
"lib2","SARS-CoV-2","ACAATATTTCTTCGTG",4,2.96,NA,NA,NA,NA,NA,NA,"stop","T100P L122* K132S T201K",4
"lib2","SARS-CoV-2","ACAATATTTGTACACA",9,117.04,10.8,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","ACAATATTTTCCTGGA",2,104.38,10.33,-0.5,0.06,2.84,1.08,0,">1 nonsynonymous","I2M K56W",2
"lib2","SARS-CoV-2","ACAATCAAAACTTACA",2,1.24,NA,NA,NA,NA,NA,NA,"stop","C6G V77R N110* Y119* G166S",5
"lib2","SARS-CoV-2","ACAATCAAAGACTTAG",5,112.14,9.41,-1.42,0.05,1.84,1.08,0,">1 nonsynonymous","A14M P133K",2
"lib2","SARS-CoV-2","ACAATCAAAGTTGCCA",5,150.4,8.85,-1.99,0.06,2.37,1.07,0,">1 nonsynonymous","N64T D112V Y123R P197A",4
"lib2","SARS-CoV-2","ACAATCAATACGGAAC",5,26.93,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6S A18T D59A S69C Y123L",5
"lib2","SARS-CoV-2","ACAATCACAATAACGC",3,23.46,10.58,-0.26,0.06,2.93,1.04,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","ACAATCACATGTTCCA",6,62.4,10.38,-0.45,0.06,2.83,1,0,">1 nonsynonymous","T55G D97K G152F",3
"lib2","SARS-CoV-2","ACAATCACCAAGCAGT",6,71.2,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36L F47V P96N Y143W G152V K198S",6
"lib2","SARS-CoV-2","ACAATCAGACCACAGT",1,25.4,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F12K N92F Y119T I142N",4
"lib2","SARS-CoV-2","ACAATCAGAGCAATCT",6,12.75,6.47,-4.36,0.62,1.5,1.12,0.04,">1 nonsynonymous","G9R T15P D98T V103Y",4
"lib2","SARS-CoV-2","ACAATCAGCCGAGAAT",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K A33K G86M N107G Y119S T201W",6
"lib2","SARS-CoV-2","ACAATCAGTCTTTCAT",1,1.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58A",1
"lib2","SARS-CoV-2","ACAATCAGTGACAATA",2,63.7,9.89,-0.95,0.06,2.46,1.05,0,">1 nonsynonymous","D34E S41G T55I C61K P149E V173K",6
"lib2","SARS-CoV-2","ACAATCATACGACAAG",5,16.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y21T C49S G86L",3
"lib2","SARS-CoV-2","ACAATCATCCCCACGA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9K I28V A105Q D112* V182A",5
"lib2","SARS-CoV-2","ACAATCATCGGCAATC",1,2.63,NA,NA,NA,NA,NA,NA,"stop","F17* A89R Y93S Y119M P133T",5
"lib2","SARS-CoV-2","ACAATCATTCCAACTT",19,116.28,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C6L S43T A67T R127L",4
"lib2","SARS-CoV-2","ACAATCCAAAACAGAG",4,0.91,NA,NA,NA,NA,NA,NA,"stop","N24* L38M I104G",3
"lib2","SARS-CoV-2","ACAATCCAAAGCCGCA",2,15.73,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N30R S36N W106K R136T F156W",5
"lib2","SARS-CoV-2","ACAATCCAAGAAAGTC",1,10.6,11.22,0.38,0.09,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATCCAGCAATGAC",9,64.34,10.8,-0.03,0.06,2.93,1.08,0,">1 nonsynonymous","I28M S45A L122E Y143F",4
"lib2","SARS-CoV-2","ACAATCCAGTTCACGC",2,21.39,8.22,-2.62,0.22,1.5,1.14,0.02,">1 nonsynonymous","V20L D97P",2
"lib2","SARS-CoV-2","ACAATCCATATATACT",9,58.57,8.86,-1.97,0.08,2.89,1.04,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","ACAATCCCAACATATA",13,241.83,10.18,-0.65,0.02,2.88,1.07,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","ACAATCCCTCCAAGTC",1,19.93,10.68,-0.16,0.11,2.64,1.37,0.01,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","ACAATCCCTCTATGTG",11,1.6,NA,NA,NA,NA,NA,NA,"stop","V77G F99L D112I N130R E141F V173S V180K T201*",8
"lib2","SARS-CoV-2","ACAATCCGGGCTTCAA",15,77.28,8.86,-1.97,0.1,1.87,1.13,0,">1 nonsynonymous","I2K V37M D112V P149H",4
"lib2","SARS-CoV-2","ACAATCCGTTCGCACT",6,1.67,NA,NA,NA,NA,NA,NA,"stop","G86L N109* F167A",3
"lib2","SARS-CoV-2","ACAATCCTACCTTAGC",2,75.47,8.09,-2.75,0.21,1.61,1.18,0.02,">1 nonsynonymous","D112V Y119Q",2
"lib2","SARS-CoV-2","ACAATCCTCAATAAAT",4,28.23,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L57W F70K",2
"lib2","SARS-CoV-2","ACAATCCTTAGTTACA",2,15.01,11.02,0.18,0.09,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAATCGAAATATGGC",7,41.63,6.49,-4.34,0.33,1.5,1.09,0.01,">1 nonsynonymous","I2F I28G Y35V C150L L183N",5
"lib2","SARS-CoV-2","ACAATCGACCCTCTCT",9,136.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38W C49M N120T",3
"lib2","SARS-CoV-2","ACAATCGAGCAAGGTC",9,79.35,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F12H D112N F126L",3
"lib2","SARS-CoV-2","ACAATCGAGGCTCCTA",2,15.18,10.34,-0.5,0.16,2.23,1.09,0.01,">1 nonsynonymous","C6K N40A",2
"lib2","SARS-CoV-2","ACAATCGATAAACTTC",1,12.78,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","ACAATCGATACTCGCA",2,7.69,10.83,-0.01,0.16,2.88,1.12,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","ACAATCGATCGTCTTT",7,20.93,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N171S V182F",2
"lib2","SARS-CoV-2","ACAATCGCTAAAATTC",5,32.82,10.8,-0.04,0.14,2.57,1.05,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACAATCGGCGTGCACC",3,12.61,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","S29F S53L L95Y R136V",4
"lib2","SARS-CoV-2","ACAATCGTACCGACTC",6,182.53,10.21,-0.62,0.03,2.79,1.05,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","ACAATCGTCGGTGACG",1,63.75,10.84,0,0.05,2.98,1.04,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","ACAATCTAAGCCATGC",3,20.2,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F62M D68M V77L S129M S147A Q163C",6
"lib2","SARS-CoV-2","ACAATCTAATACAACC",2,60.31,10.76,-0.07,0.04,2.92,1.07,0,"1 nonsynonymous","V153D",1
"lib2","SARS-CoV-2","ACAATCTAATTCTTAT",2,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T G86K",2
"lib2","SARS-CoV-2","ACAATCTACATTGTAA",13,203.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28P K128E I142G",3
"lib2","SARS-CoV-2","ACAATCTACTTTAATT",3,20.96,10.9,0.06,0.04,2.95,1.06,0,">1 nonsynonymous","I2L S129G",2
"lib2","SARS-CoV-2","ACAATCTATGAACTGC",7,82.73,10.84,0.01,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATCTCCTGTTTAA",5,8.66,7.76,-3.08,0.27,1.5,1.09,0.03,">1 nonsynonymous","K56R Q84R V182S H189Q",4
"lib2","SARS-CoV-2","ACAATCTCGGTAAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","A33*",1
"lib2","SARS-CoV-2","ACAATCTCTTGCCTAA",2,19.86,6.54,-4.3,0.64,1.5,1.19,0.06,">1 nonsynonymous","L57R D97F P133E",3
"lib2","SARS-CoV-2","ACAATCTCTTTTGGAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36F G155S",2
"lib2","SARS-CoV-2","ACAATCTGACAGTTAA",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q S45T A89W",3
"lib2","SARS-CoV-2","ACAATCTGCATTTTCT",3,53.45,8.25,-2.59,0.28,1.5,1,0.03,">1 nonsynonymous","I2V A22V D59M Q168C",4
"lib2","SARS-CoV-2","ACAATCTGCGAGGAGG",5,0.03,NA,NA,NA,NA,NA,NA,"stop","S29T Y91* K128S",3
"lib2","SARS-CoV-2","ACAATCTTAAATTCAG",9,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R Q168C",2
"lib2","SARS-CoV-2","ACAATGAAAAAGCAGT",7,122.22,9.2,-1.64,0.03,2.99,1.04,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","ACAATGAAACTCGCGA",11,26.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3D T46L V181S",3
"lib2","SARS-CoV-2","ACAATGAAAGAATATG",6,106.06,7.62,-3.22,0.14,2.06,1.15,0.01,">1 nonsynonymous","G146P G155S",2
"lib2","SARS-CoV-2","ACAATGAAATGGAAAC",2,0.64,NA,NA,NA,NA,NA,NA,"stop","L60* A89Q R124S V153I",4
"lib2","SARS-CoV-2","ACAATGAAGAAGCGTT",1,57.88,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G172M K198S",2
"lib2","SARS-CoV-2","ACAATGACAAGTAACT",2,67.73,6,-4.84,1.47,1.5,1.14,0.01,">1 nonsynonymous","Y91S N157H",2
"lib2","SARS-CoV-2","ACAATGACACATCTGG",7,109.02,6,-4.84,0.89,1.5,1.16,0.01,">1 nonsynonymous","C61M F126D G152N",3
"lib2","SARS-CoV-2","ACAATGACGACTTTGA",2,9.77,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","V71Y K87Y L95K E154Y P177S",5
"lib2","SARS-CoV-2","ACAATGACGGCACCTT",5,26.23,9.78,-1.06,0.07,2.93,1.1,0,">1 nonsynonymous","L38F T55E T170K",3
"lib2","SARS-CoV-2","ACAATGAGAATTATGG",1,18.83,10.73,-0.11,0.06,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATGAGCCGAGCGA",1,23.91,10.27,-0.57,0.12,2.64,1.08,0.01,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","ACAATGAGCGGGGAGG",18,69.96,6,-4.84,1.86,1.5,1.27,0.04,">1 nonsynonymous","K87A N130W E135V V153Q L183T",5
"lib2","SARS-CoV-2","ACAATGAGTACATATA",6,51.43,8.76,-2.08,0.28,1.5,1,0.04,">1 nonsynonymous","S43L G101A L122S S129T",4
"lib2","SARS-CoV-2","ACAATGAGTACCACTA",2,18.68,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","P96F A105S L122A C195S",4
"lib2","SARS-CoV-2","ACAATGAGTGTCACAA",6,44.64,9.61,-1.23,0.12,1.9,1.02,0.01,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","ACAATGAGTTATTACT",2,23.53,7.97,-2.87,0.22,1.5,1.05,0.02,">1 nonsynonymous","W23V S36Y V37P",3
"lib2","SARS-CoV-2","ACAATGAGTTCAAAAA",9,0.76,NA,NA,NA,NA,NA,NA,"stop","D34* R73Q A81C Y91C S200Y",5
"lib2","SARS-CoV-2","ACAATGATACACTGCG",3,81.21,10.81,-0.03,0.05,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATGATAGATTGAC",1,33.14,10.5,-0.33,0.07,2.81,1.1,0,">1 nonsynonymous","S41L D90S L187A",3
"lib2","SARS-CoV-2","ACAATGATATATGCAG",2,14.28,6,-4.84,2,1.5,1.16,0.04,"1 nonsynonymous","K94W",1
"lib2","SARS-CoV-2","ACAATGATGGTCAGGG",18,313.36,10.89,0.06,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATGATTAAAATAA",4,0,NA,NA,NA,NA,NA,NA,"stop","L5* F12D C49V",3
"lib2","SARS-CoV-2","ACAATGATTACAAAAA",11,3.34,NA,NA,NA,NA,NA,NA,"stop","N1* S19Q L122K T170K",4
"lib2","SARS-CoV-2","ACAATGATTACAAAGG",4,28.87,10.68,-0.15,0.05,3,1,0,">1 nonsynonymous","I2L S184A",2
"lib2","SARS-CoV-2","ACAATGATTAGCCCCC",9,132.82,10.82,-0.01,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATGCACGCCATTA",1,5.66,10.7,-0.14,0.08,3,1,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","ACAATGCATAAGTTTT",9,51.56,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C6A K94S S108T V180S",4
"lib2","SARS-CoV-2","ACAATGCCAAATCCCA",7,37.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51W V103T G116D",3
"lib2","SARS-CoV-2","ACAATGCCCTCTAAGA",6,69.21,10.39,-0.45,0.05,3,1.02,0,"1 nonsynonymous","A14C",1
"lib2","SARS-CoV-2","ACAATGCGGACGAGTT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","I142Q S147* V153L Q163L",4
"lib2","SARS-CoV-2","ACAATGCGGTCTCTAC",5,35.48,10.8,-0.04,0.07,2.9,1.09,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","ACAATGCGTAGAATCT",8,0.65,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib2","SARS-CoV-2","ACAATGCTCCTAAACC",6,46.36,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y21S A42D V77G G117Y R127S",5
"lib2","SARS-CoV-2","ACAATGGAGACATTGA",4,46.5,10.33,-0.51,0.08,2.87,1.01,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","ACAATGGCAAATCGGA",10,60.34,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","I80E",1
"lib2","SARS-CoV-2","ACAATGGCAGTATGAC",14,18.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13E R16S R73V S129G Y165G",5
"lib2","SARS-CoV-2","ACAATGGCCCACAGCA",3,26.03,7.91,-2.93,0.16,1.71,1.12,0.01,">1 nonsynonymous","C31T Y123T",2
"lib2","SARS-CoV-2","ACAATGGTAGTCGATT",9,132.56,10.71,-0.13,0.04,2.93,1.08,0,">1 nonsynonymous","R78S S184V",2
"lib2","SARS-CoV-2","ACAATGGTATGACGAC",15,241.54,9.02,-1.81,0.04,2.95,1.06,0,">1 nonsynonymous","S43L N120P V153S",3
"lib2","SARS-CoV-2","ACAATGTAAAATTTAT",3,170.01,10.2,-0.64,0.04,2.48,1.02,0,">1 nonsynonymous","T3R T85Q G152Y Q163T",4
"lib2","SARS-CoV-2","ACAATGTACATTAAAG",5,60.67,8.47,-2.36,0.13,1.5,1.05,0.01,">1 nonsynonymous","P82V Y123A G174S K199S",4
"lib2","SARS-CoV-2","ACAATGTCTGACTATA",1,17.98,10.49,-0.35,0.09,2.82,1.04,0.01,">1 nonsynonymous","A33N N151L",2
"lib2","SARS-CoV-2","ACAATGTGAATTGAAG",6,82.75,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F62C L131R",2
"lib2","SARS-CoV-2","ACAATGTTAACCATAA",19,306.04,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V32L G101R Y121N Q176R L183F",5
"lib2","SARS-CoV-2","ACAATGTTAGAACGGA",19,237.89,9.16,-1.67,0.05,2.58,1.04,0,">1 nonsynonymous","R78T P96N G155D",3
"lib2","SARS-CoV-2","ACAATGTTTAAACGAA",5,41.08,8.37,-2.47,0.13,2.53,1.1,0.01,">1 nonsynonymous","S36R Y119L P149Y S164A",4
"lib2","SARS-CoV-2","ACAATGTTTTTATCGG",7,64.95,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P54Q N92R",2
"lib2","SARS-CoV-2","ACAATTAAAAAATACT",9,184.6,10.79,-0.05,0.05,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTAACACACTAT",4,39.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T46Y Y50L N64L G101L R127V T201V",6
"lib2","SARS-CoV-2","ACAATTAACTTGTAAA",1,8.88,10.79,-0.05,0.09,3,1.04,0,">1 nonsynonymous","N4Q T100H",2
"lib2","SARS-CoV-2","ACAATTAAGCCCGGTG",5,186.84,10.61,-0.22,0.03,2.92,1.07,0,">1 nonsynonymous","S41I I142L",2
"lib2","SARS-CoV-2","ACAATTAATCCCTGTT",9,134.69,9.95,-0.89,0.08,2.19,1,0,">1 nonsynonymous","V77R S184N",2
"lib2","SARS-CoV-2","ACAATTACAATTGTGC",1,54.77,10.36,-0.48,0.06,2.88,1.05,0,"1 nonsynonymous","L183V",1
"lib2","SARS-CoV-2","ACAATTACAGAATGCA",1,16.78,10.86,0.02,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTACCAACGACA",11,0,NA,NA,NA,NA,NA,NA,"stop","C6* C49H V115C S129Y T140*",5
"lib2","SARS-CoV-2","ACAATTACCCAACAGA",6,18.93,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T55M K87T Y93S G172V",4
"lib2","SARS-CoV-2","ACAATTACTAAGCCCT",1,21.82,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C49G N58L N120R",3
"lib2","SARS-CoV-2","ACAATTAGAGTTGGCA",2,37.59,10.78,-0.05,0.08,2.94,1.08,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","ACAATTAGGTAAGGAT",7,96.37,10.86,0.02,0.07,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTAGTCTGAAAC",4,71.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40H L95R E141R G152F",4
"lib2","SARS-CoV-2","ACAATTATACATCACA",4,49.12,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V37I S45A A89V C158S",4
"lib2","SARS-CoV-2","ACAATTATATAGTAAC",6,75.65,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7V W23K R27E D68T Y91V G155P",6
"lib2","SARS-CoV-2","ACAATTATCTCACTGT",1,22.05,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G9V S53R Q168P",3
"lib2","SARS-CoV-2","ACAATTATGCGTCTAC",5,74.96,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","T85S F99G Y123I",3
"lib2","SARS-CoV-2","ACAATTATTAAGAAAT",3,13.78,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F12Q T46S A81K T85A D90N S129A P169W V173I",8
"lib2","SARS-CoV-2","ACAATTATTCATACGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N120* I138T E186F",3
"lib2","SARS-CoV-2","ACAATTCAAAAATGCC",6,104.77,8.24,-2.6,0.27,1.5,1,0.03,">1 nonsynonymous","L57C P96D",2
"lib2","SARS-CoV-2","ACAATTCACTTACATG",7,36.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K48W L60I D68F Y119C F156L V180S T201P",7
"lib2","SARS-CoV-2","ACAATTCAGGAATTGT",2,25.56,10.95,0.11,0.08,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTCCAAGAACGG",4,9.2,6,-4.84,1.26,1.5,1.15,0.02,">1 nonsynonymous","F62T I104N",2
"lib2","SARS-CoV-2","ACAATTCCCAGTGTAC",11,121.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86V G146Q",2
"lib2","SARS-CoV-2","ACAATTCCTGTTTATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","ACAATTCGCGGATCAC",6,44.28,9.27,-1.56,0.07,2.82,1.02,0,">1 nonsynonymous","R73L I138L",2
"lib2","SARS-CoV-2","ACAATTCGCTTGGCAA",11,7.3,NA,NA,NA,NA,NA,NA,"stop","Y39* P149H P197R",3
"lib2","SARS-CoV-2","ACAATTCGGATATGAA",6,33.72,10.68,-0.15,0.02,2.97,1.05,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","ACAATTCTACTAGATG",6,10.36,7.71,-3.13,0.31,1.5,1.01,0.04,">1 nonsynonymous","A14N D34Y F134H E154C",4
"lib2","SARS-CoV-2","ACAATTCTCTCTCGAC",6,129.68,9.67,-1.17,0.07,1.99,1.06,0,">1 nonsynonymous","C61T V77R D98N K128L",4
"lib2","SARS-CoV-2","ACAATTCTGAATAAGG",11,156.5,9.23,-1.61,0.03,2.91,1.09,0,">1 nonsynonymous","Y119H G155Q",2
"lib2","SARS-CoV-2","ACAATTGAAGGTACAA",4,0.43,NA,NA,NA,NA,NA,NA,"stop","T15I K87* R179*",3
"lib2","SARS-CoV-2","ACAATTGAATAGGATC",3,34.74,9.92,-0.91,0.07,2.65,1.05,0,">1 nonsynonymous","N24M V37A T46Q Y178S",4
"lib2","SARS-CoV-2","ACAATTGACACGCAGC",6,41.78,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","ACAATTGACTAAATAA",11,69.89,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N58D V103L F134L",3
"lib2","SARS-CoV-2","ACAATTGATAAGACAA",3,23.98,8.05,-2.78,0.25,1.84,1.07,0.02,">1 nonsynonymous","F126P V173R",2
"lib2","SARS-CoV-2","ACAATTGCGCGTCACG",4,36.69,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I72Y T148A N157M",3
"lib2","SARS-CoV-2","ACAATTGCGTATTTAC",3,46.53,6.75,-4.09,0.44,1.5,1.17,0.03,">1 nonsynonymous","E76K Y119M",2
"lib2","SARS-CoV-2","ACAATTGCTGTACTTT",4,0.09,NA,NA,NA,NA,NA,NA,"stop","Y35Q S41L C61* T148P",4
"lib2","SARS-CoV-2","ACAATTGGCTAGATTA",10,28.15,NA,NA,NA,NA,NA,NA,"stop","S36V P96C S129* T170R",4
"lib2","SARS-CoV-2","ACAATTGTCTTTGTGT",9,148.92,6.5,-4.34,0.2,1.94,1.14,0,">1 nonsynonymous","N120R C150D",2
"lib2","SARS-CoV-2","ACAATTTAACATAGGA",2,65.36,10.4,-0.44,0.07,2.95,1.03,0,">1 nonsynonymous","A33V S41R S200T",3
"lib2","SARS-CoV-2","ACAATTTAATAACACA",4,18.61,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C49Q T140G",2
"lib2","SARS-CoV-2","ACAATTTAATTGGCGG",2,33.51,10.66,-0.18,0.04,2.93,1.08,0,"1 nonsynonymous","Q163R",1
"lib2","SARS-CoV-2","ACAATTTACAGGAATG",5,85.88,10.68,-0.16,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTTCAACTAAAC",7,73.8,10.94,0.1,0.07,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTTCAGAGGAAG",5,36.95,7.02,-3.82,0.18,1.5,1.09,0.01,">1 nonsynonymous","R16Y D112N V173D",3
"lib2","SARS-CoV-2","ACAATTTCCAACACTG",10,48.3,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","L5N D98G G101T",3
"lib2","SARS-CoV-2","ACAATTTCTTTTGAAC",9,70.72,9.28,-1.55,0.08,2.35,1.08,0,">1 nonsynonymous","I2M Y35W G155Y V181L P197Y",5
"lib2","SARS-CoV-2","ACAATTTGAGTCTTAG",1,92.97,6,-4.84,1.99,1.68,1.13,0.01,">1 nonsynonymous","A33W L60N N92T R136M Q163I Y178L V182S",7
"lib2","SARS-CoV-2","ACAATTTGCAACTAAC",1,6.63,11.05,0.21,0.2,2.58,1.14,0.01,">1 nonsynonymous","S45T N64F",2
"lib2","SARS-CoV-2","ACAATTTGCAAGCTCG",3,33.64,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G51L L95I F134R N157T",4
"lib2","SARS-CoV-2","ACAATTTGCGTACAAA",3,51.95,10.84,0,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAATTTTACGCAACG",4,26.98,9.05,-1.79,0.23,1.5,1.01,0.02,">1 nonsynonymous","R78V W106T S139H E154P",4
"lib2","SARS-CoV-2","ACAATTTTGCAGTAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S I28Q",2
"lib2","SARS-CoV-2","ACAATTTTTTGAGCCG",2,6.13,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","R27Q N40Q E76A Y119S E141R",5
"lib2","SARS-CoV-2","ACACAAAAAAAGCAAA",1,46.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88V G146D N157V",3
"lib2","SARS-CoV-2","ACACAAAAAGAACGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* G83V K87L",3
"lib2","SARS-CoV-2","ACACAAAAAGCCCTAG",1,8.08,10.11,-0.73,0.07,3,1,0,">1 nonsynonymous","Y39K S45V",2
"lib2","SARS-CoV-2","ACACAAAAATATACGG",4,37.66,10.84,0,0.09,2.78,1.22,0,">1 nonsynonymous","V37S T85S",2
"lib2","SARS-CoV-2","ACACAAAAATTGGAAA",2,1.16,NA,NA,NA,NA,NA,NA,"stop","T3R A105L I142Q N151* L183I H189D",6
"lib2","SARS-CoV-2","ACACAAAACCACCTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* I80T D97V Y175S",4
"lib2","SARS-CoV-2","ACACAAAAGGGAGAGT",2,42.13,8.93,-1.91,0.07,2.93,1.11,0,">1 nonsynonymous","A14K K87I Y119N S200D",4
"lib2","SARS-CoV-2","ACACAAAAGTAGAATT",6,55.18,6.24,-4.6,0.71,1.5,1.25,0.02,">1 nonsynonymous","F8G T55Y A81G Q168N T201R",5
"lib2","SARS-CoV-2","ACACAAAAGTGCGTTG",6,58.72,10.71,-0.13,0.04,2.82,1.18,0,">1 nonsynonymous","G9H C61L",2
"lib2","SARS-CoV-2","ACACAAACAAACCTCT",2,8.27,10.15,-0.69,0.16,2.82,1.15,0.01,"1 nonsynonymous","S184R",1
"lib2","SARS-CoV-2","ACACAAACAATCCAGG",8,96.76,10.83,0,0.05,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","ACACAAACAATGTAAC",4,37.04,10.99,0.16,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACAAACACCTGAGG",4,49.8,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23G T46F P96F N107D F134V",5
"lib2","SARS-CoV-2","ACACAAACAGAGGTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S45D P54V V115*",3
"lib2","SARS-CoV-2","ACACAAACCTTGAAAA",7,1.64,NA,NA,NA,NA,NA,NA,"stop","A81S T100H N107* D137Y",4
"lib2","SARS-CoV-2","ACACAAAGACTTACAA",10,18.98,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L57V A89Q S164I",3
"lib2","SARS-CoV-2","ACACAAAGCCGGTCAT",1,19.37,8.08,-2.76,0.27,1.5,1.05,0.03,">1 nonsynonymous","D90R N107G Q168L T201S",4
"lib2","SARS-CoV-2","ACACAAAGCTATCATA",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F A14F S139Y C158Y",4
"lib2","SARS-CoV-2","ACACAAAGTGCTCTCC",12,91.82,9.06,-1.78,0.14,1.5,1.1,0.01,"1 nonsynonymous","A67R",1
"lib2","SARS-CoV-2","ACACAAATACAGTTTA",1,17.16,10.49,-0.34,0.16,2.72,1.02,0.01,">1 nonsynonymous","I2S P54T D90N D97M",4
"lib2","SARS-CoV-2","ACACAAATCAGTAAAT",4,77.58,9.99,-0.85,0.04,2.71,1.02,0,">1 nonsynonymous","T3S Q79R",2
"lib2","SARS-CoV-2","ACACAACAAAGTTCAG",6,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D T85W P96M L122Q T148G",5
"lib2","SARS-CoV-2","ACACAACAAATTCAGG",7,257.02,10.05,-0.79,0.06,2.38,1.05,0,">1 nonsynonymous","N4P F8L V32I S139I",4
"lib2","SARS-CoV-2","ACACAACAGTTCCAGC",3,21.93,9.99,-0.84,0.12,2.1,1,0,">1 nonsynonymous","K94A A105S L122G S184F",4
"lib2","SARS-CoV-2","ACACAACATCTGTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27P P54L P82R F99A",4
"lib2","SARS-CoV-2","ACACAACCAGCACAAA",1,41.16,9.97,-0.86,0.06,2.9,1.08,0,">1 nonsynonymous","L5A N107Q",2
"lib2","SARS-CoV-2","ACACAACCAGTCCACC",4,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L S69R A89Y",3
"lib2","SARS-CoV-2","ACACAACCCTCCTATT",1,43.46,9.15,-1.69,0.13,1.82,1.09,0.01,">1 nonsynonymous","F12Y S36N Q144P",3
"lib2","SARS-CoV-2","ACACAACCTTACACTA",3,0,NA,NA,NA,NA,NA,NA,"stop","N40A A105*",2
"lib2","SARS-CoV-2","ACACAACGAGTTCCTT",4,45.74,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","C61R F70D D137P",3
"lib2","SARS-CoV-2","ACACAACGTAAAACGC",1,7.96,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C31S G83F N107T N120L R179I V180F",6
"lib2","SARS-CoV-2","ACACAACTAATTCAGA",7,97.76,10.03,-0.81,0.05,2.76,1.05,0,">1 nonsynonymous","D98R N151P",2
"lib2","SARS-CoV-2","ACACAACTACGTACCG",6,256.3,8.17,-2.67,0.12,2.52,1.08,0.01,">1 nonsynonymous","E10P Y175M",2
"lib2","SARS-CoV-2","ACACAACTATGCCAGC",1,27.31,10.88,0.04,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACAACTCAAGATCC",2,12.49,10.25,-0.58,0.06,3,1.06,0,">1 nonsynonymous","S45Q G152T",2
"lib2","SARS-CoV-2","ACACAACTCGACAGAA",6,6.01,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","V20S T85I I104S V153Q",4
"lib2","SARS-CoV-2","ACACAACTGACGATAG",17,273.93,10.57,-0.27,0.04,2.91,1.06,0,">1 nonsynonymous","R78S K87H K199M",3
"lib2","SARS-CoV-2","ACACAACTGCAAACCA",3,6.59,6.22,-4.62,0.81,1.5,1.06,0.01,">1 nonsynonymous","K48R V103S N151T T170L",4
"lib2","SARS-CoV-2","ACACAACTTGACGAGG",2,160.98,9.47,-1.37,0.08,2.4,1.09,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","ACACAAGAAAAAAGAG",1,9.57,9.89,-0.95,0.12,2.91,1.17,0.01,">1 nonsynonymous","L5S E141F L183I",3
"lib2","SARS-CoV-2","ACACAAGAAATCGAAG",3,20.5,10.35,-0.49,0.18,2.15,1.05,0.01,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","ACACAAGAAGAACACA",6,1.19,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","ACACAAGAAGATATAT",1,14.43,9.76,-1.07,0.1,2.14,1.01,0,">1 nonsynonymous","N1P P7L F44Y Y91M L122H",5
"lib2","SARS-CoV-2","ACACAAGAATGATGAT",1,35.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F70S K94V C102W V115L",4
"lib2","SARS-CoV-2","ACACAAGATAAATAAG",1,75.24,9.2,-1.64,0.06,2.83,1.11,0,">1 nonsynonymous","A14R G174C",2
"lib2","SARS-CoV-2","ACACAAGATACCTTTC",5,11.39,NA,NA,NA,NA,NA,NA,"stop","T15Q A33R D59* A89N R136H",5
"lib2","SARS-CoV-2","ACACAAGATGTAAAGT",2,59.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19E R127H Q176S",3
"lib2","SARS-CoV-2","ACACAAGATTCCGTGT",1,42.83,10.77,-0.06,0.06,2.92,1.11,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","ACACAAGATTTATATA",8,45.33,10.02,-0.81,0.1,2.05,1.08,0,">1 nonsynonymous","N4S F8S",2
"lib2","SARS-CoV-2","ACACAAGCTATACATC",5,56.73,10.57,-0.27,0.08,2.85,1.03,0,">1 nonsynonymous","A81R S200C",2
"lib2","SARS-CoV-2","ACACAAGCTTGTGTCC",2,0.62,NA,NA,NA,NA,NA,NA,"stop","S19* F62T D98H",3
"lib2","SARS-CoV-2","ACACAAGGTACCTGTT",2,20.4,10.61,-0.22,0.08,2.8,1.18,0.01,">1 nonsynonymous","I2A G9W D97F",3
"lib2","SARS-CoV-2","ACACAAGGTGACTCTA",10,66.72,10.76,-0.07,0.04,3,1.03,0,">1 nonsynonymous","N40Q S129V",2
"lib2","SARS-CoV-2","ACACAAGTAGATGGCG",3,29.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S69Q I142A N157Q Q163G",4
"lib2","SARS-CoV-2","ACACAAGTCTGATTGA",3,45.98,10.79,-0.05,0.07,2.84,1.12,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","ACACAATAAAGAACAA",3,28.24,8.95,-1.89,0.21,2.08,1.05,0.02,">1 nonsynonymous","N4K E10A N107T",3
"lib2","SARS-CoV-2","ACACAATACCAGTAGA",19,233.26,6,-4.84,0.68,1.5,1.16,0.01,">1 nonsynonymous","D68W P149R",2
"lib2","SARS-CoV-2","ACACAATACGCATCCT",9,157.39,10.21,-0.62,0.02,2.79,1,0,">1 nonsynonymous","P7F D34R",2
"lib2","SARS-CoV-2","ACACAATATGAGATGC",2,9.73,8.66,-2.17,0.11,3,1.04,0.01,">1 nonsynonymous","V37I N118C L125H",3
"lib2","SARS-CoV-2","ACACAATCATCTGATG",1,33.88,10.81,-0.03,0.04,2.89,1.11,0,">1 nonsynonymous","D59E S129V",2
"lib2","SARS-CoV-2","ACACAATCGAACTCTA",4,0.36,NA,NA,NA,NA,NA,NA,"stop","K26* V37L A81E N157R",4
"lib2","SARS-CoV-2","ACACAATCTTAATCGA",3,58.26,10.79,-0.04,0.05,2.95,1.09,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","ACACAATCTTTGCGAT",1,0.64,NA,NA,NA,NA,NA,NA,"stop","K26A L60A D90I G152*",4
"lib2","SARS-CoV-2","ACACAATGAACCTAGC",8,39.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T46H F70N R78V E135W",4
"lib2","SARS-CoV-2","ACACAATGCCACATGA",3,15.44,7.11,-3.73,0.31,1.53,1.13,0.03,">1 nonsynonymous","I2L R127W K198T",3
"lib2","SARS-CoV-2","ACACAATGTAACCGTT",15,164.91,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9E R16L N151L P161R T201V",5
"lib2","SARS-CoV-2","ACACAATTAATGAAAA",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K K56Y",2
"lib2","SARS-CoV-2","ACACAATTAATGTTTA",7,53.01,10.51,-0.33,0.04,2.95,1.08,0,">1 nonsynonymous","L5H G155T K199H",3
"lib2","SARS-CoV-2","ACACAATTATAACGTT",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D P149S N171K",3
"lib2","SARS-CoV-2","ACACAATTGGAATACT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","C6P V181*",2
"lib2","SARS-CoV-2","ACACAATTTCCCATTG",1,16.74,8.94,-1.9,0.37,1.5,1.07,0.06,">1 nonsynonymous","C61P P96M",2
"lib2","SARS-CoV-2","ACACAATTTTATATGA",1,15.58,10.72,-0.12,0.04,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACACAAAAACCTGT",10,123.11,9.99,-0.85,0.07,2.27,1.04,0,"1 nonsynonymous","A81Y",1
"lib2","SARS-CoV-2","ACACACAACACCGGAT",3,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S D112A",2
"lib2","SARS-CoV-2","ACACACAACTGTGGAA",3,88.88,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N4K L5V R25C T46I P149R Y178S",6
"lib2","SARS-CoV-2","ACACACAAGCCATACC",3,3.86,NA,NA,NA,NA,NA,NA,"stop","T15S K87* P169S",3
"lib2","SARS-CoV-2","ACACACACACAATATG",3,20.54,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D112V K128T C158T",3
"lib2","SARS-CoV-2","ACACACACATTAACCG",5,66.16,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","N130Y S139T F167G",3
"lib2","SARS-CoV-2","ACACACACCTCTTATG",11,5.52,NA,NA,NA,NA,NA,NA,"stop","D59G D68* K114R P177K",4
"lib2","SARS-CoV-2","ACACACACGAACCCCC",5,10.65,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","G86C Y119M F126Y",3
"lib2","SARS-CoV-2","ACACACACTGTTGACC",8,221.89,10.15,-0.68,0.02,2.87,1.03,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","ACACACAGGTTCGACA",2,41.38,10.91,0.07,0.07,2.91,1.1,0,">1 nonsynonymous","L5S P149S",2
"lib2","SARS-CoV-2","ACACACAGTTACGAGT",1,6.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G F44V D137L",3
"lib2","SARS-CoV-2","ACACACATAAATTAAC",6,47.29,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A42C F99Y F134E T170F",4
"lib2","SARS-CoV-2","ACACACATAATCTATA",14,50.78,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","I2Y W23Q F62S G83S V103R L125A",6
"lib2","SARS-CoV-2","ACACACATTAAAACCG",15,26.57,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S41V Y66P F99E V173W",4
"lib2","SARS-CoV-2","ACACACATTTTATATA",6,52.56,8.66,-2.18,0.15,1.5,1.12,0.01,">1 nonsynonymous","D75L A105F",2
"lib2","SARS-CoV-2","ACACACCAAAGGTAGC",4,19.01,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","F44L I80A Y119N G152N F156T",5
"lib2","SARS-CoV-2","ACACACCAAGGCTGTC",8,79.19,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22T I80K N120L",3
"lib2","SARS-CoV-2","ACACACCAAGTCCTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","D90* Y119P",2
"lib2","SARS-CoV-2","ACACACCACACCCGTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","ACACACCACGTAGCAA",6,42.11,9.28,-1.55,0.15,1.9,1.01,0.01,">1 nonsynonymous","A18T A33R F44G K198G",4
"lib2","SARS-CoV-2","ACACACCAGAAACGAA",1,21.53,10.26,-0.58,0.07,2.99,1.02,0,">1 nonsynonymous","F62A K87V Y91S",3
"lib2","SARS-CoV-2","ACACACCATAAGCGAA",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D G155C P169L",3
"lib2","SARS-CoV-2","ACACACCATACACCCG",1,5.22,6.18,-4.66,0.34,3,1.01,0,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","ACACACCCCATAAGTA",8,36.59,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N13I Y165L",2
"lib2","SARS-CoV-2","ACACACCCGGAGCGCA",2,25.03,9.72,-1.11,0.11,1.84,1.17,0,">1 nonsynonymous","T3L R27W D90C",3
"lib2","SARS-CoV-2","ACACACCGCTAAACCC",16,558.39,10.77,-0.06,0.03,2.95,1.05,0,">1 nonsynonymous","D59G T100M",2
"lib2","SARS-CoV-2","ACACACCTCTATCAAT",7,27.5,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A33S D68I Y119N T170V",4
"lib2","SARS-CoV-2","ACACACCTTTGCATTT",3,30.37,10.73,-0.1,0.08,3,1.04,0,"1 nonsynonymous","Q84E",1
"lib2","SARS-CoV-2","ACACACGAACGTCCGC",5,5.36,7.86,-2.98,0.72,1.5,1,0.01,">1 nonsynonymous","A22V S139W",2
"lib2","SARS-CoV-2","ACACACGAATACAGGC",1,6.11,10.14,-0.69,0.33,2.37,1,0.01,">1 nonsynonymous","F8M N13R F47I",3
"lib2","SARS-CoV-2","ACACACGCAATTACCC",2,61.2,10.71,-0.13,0.04,2.92,1.08,0,"1 nonsynonymous","S45E",1
"lib2","SARS-CoV-2","ACACACGCGGTGAATA",11,23.64,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L57R V103S",2
"lib2","SARS-CoV-2","ACACACGCTCATTATA",2,1.94,NA,NA,NA,NA,NA,NA,"stop","C6L F12* N130S G146L F160S R179C",6
"lib2","SARS-CoV-2","ACACACGGCACCATAC",4,137.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L38F T55W S69A W106L R124V",5
"lib2","SARS-CoV-2","ACACACGGTGCACTCC",6,67.2,10.85,0.02,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACACGGTGTGTCCT",10,65.05,8.42,-2.41,0.08,1.73,1.09,0,">1 nonsynonymous","D97V P161V T201K",3
"lib2","SARS-CoV-2","ACACACGTTAAGGTTG",5,72.26,8.84,-2,0.06,1.97,1.07,0,">1 nonsynonymous","C6K V37H L122E S164Y",4
"lib2","SARS-CoV-2","ACACACTAACGACCGT",3,22.23,10.75,-0.08,0.1,2.81,1.18,0,">1 nonsynonymous","G152R A192E",2
"lib2","SARS-CoV-2","ACACACTACTTATCGG",9,13.88,NA,NA,NA,NA,NA,NA,"stop","S41V C49* K114I",3
"lib2","SARS-CoV-2","ACACACTCAACGGTAT",1,9.82,9.26,-1.57,0.28,1.73,1.27,0.03,">1 nonsynonymous","F8S R27Q C61R D97R V115K C195R",6
"lib2","SARS-CoV-2","ACACACTCTAACTTCA",3,0.21,NA,NA,NA,NA,NA,NA,"stop","K94* K114L R136F P169H",4
"lib2","SARS-CoV-2","ACACACTGGTGGCAAT",6,14.53,8.76,-2.08,0.33,1.86,1.1,0.04,">1 nonsynonymous","D59N G86S S129H",3
"lib2","SARS-CoV-2","ACACACTTTACAACCC",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S D59G S69M C158R",4
"lib2","SARS-CoV-2","ACACAGAACAAGTGGC",8,49.28,10.34,-0.49,0.07,2.84,1.06,0,">1 nonsynonymous","A22W S129A",2
"lib2","SARS-CoV-2","ACACAGAACTTTCGAT",9,128.87,10.2,-0.64,0.07,2.68,1.03,0,">1 nonsynonymous","I2S G9Y L38W D97I",4
"lib2","SARS-CoV-2","ACACAGAATAAATTAT",3,20.37,7.85,-2.98,0.14,1.55,1.19,0.01,">1 nonsynonymous","V11G I142K T201G",3
"lib2","SARS-CoV-2","ACACAGAATATCCCGA",1,15.08,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A22S T46P Y91D K132V T170A",5
"lib2","SARS-CoV-2","ACACAGAATCACACAA",3,45,6.17,-4.67,0.46,1.5,1.14,0.01,">1 nonsynonymous","P96S C158I",2
"lib2","SARS-CoV-2","ACACAGACCCATGCTA",12,111.59,7,-3.84,0.3,1.5,1.12,0.02,"1 nonsynonymous","R179I",1
"lib2","SARS-CoV-2","ACACAGACGTATATTA",1,77.27,10.64,-0.2,0.06,2.94,1.06,0,">1 nonsynonymous","L131M T201G",2
"lib2","SARS-CoV-2","ACACAGACTCAGTATG",1,27.9,7.58,-3.26,0.15,1.52,1.14,0.01,">1 nonsynonymous","C61A S69K F156G",3
"lib2","SARS-CoV-2","ACACAGAGCTGAAGAA",6,44.08,10.8,-0.04,0.06,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACAGATAAATATAG",3,11.33,10.91,0.07,0.08,2.89,1.13,0,">1 nonsynonymous","L5H K48R T100I T201V",4
"lib2","SARS-CoV-2","ACACAGCACAAACTAC",5,141.08,10.86,0.02,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACAGCACTACGTGC",2,17.64,10.56,-0.27,0.09,2.93,1.04,0.01,">1 nonsynonymous","E10T T140L E154R",3
"lib2","SARS-CoV-2","ACACAGCCAGAAACAT",1,60.56,10.51,-0.33,0.03,2.95,1.03,0,">1 nonsynonymous","V32K S45H G196F",3
"lib2","SARS-CoV-2","ACACAGCCTCCTTGGA",5,120.94,10.66,-0.18,0.02,2.96,1.04,0,">1 nonsynonymous","D59E Y66C",2
"lib2","SARS-CoV-2","ACACAGCGATCGTAAC",5,89.72,10.43,-0.4,0.04,2.9,1.03,0,">1 nonsynonymous","D59V K128T",2
"lib2","SARS-CoV-2","ACACAGCGCACACCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V71* G146W",2
"lib2","SARS-CoV-2","ACACAGCGCTCTTATC",3,65.86,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N130Q P161R",2
"lib2","SARS-CoV-2","ACACAGCTTAACGCTG",4,11.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2H F8C F99I",3
"lib2","SARS-CoV-2","ACACAGGAATGATTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A89* L125F P161I",3
"lib2","SARS-CoV-2","ACACAGGAGTACGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V A105R G146S",3
"lib2","SARS-CoV-2","ACACAGGAGTGTCTAA",2,39.15,9.83,-1,0.11,2.32,1.03,0.01,">1 nonsynonymous","L38H S43I",2
"lib2","SARS-CoV-2","ACACAGGATCACTGCA",5,1.34,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","ACACAGGCTATACACG",3,41.03,9.25,-1.58,0.14,2.3,1.08,0.01,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","ACACAGGCTATGAATG",2,81.41,10.32,-0.51,0.04,2.87,1.06,0,">1 nonsynonymous","L38F T46R S129R",3
"lib2","SARS-CoV-2","ACACAGGTACCACTAA",6,47.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2S A42R L95F W106L A145T",5
"lib2","SARS-CoV-2","ACACAGGTCAATGGAT",31,482.62,8.13,-2.71,0.1,1.91,1.06,0,">1 nonsynonymous","P7A T55V T100K T170I",4
"lib2","SARS-CoV-2","ACACAGGTCTACCCGG",2,96.23,10.71,-0.13,0.05,2.92,1.07,0,">1 nonsynonymous","L5V S43V D97V",3
"lib2","SARS-CoV-2","ACACAGGTGAATAGAC",5,1.52,NA,NA,NA,NA,NA,NA,"stop","D68* T100H",2
"lib2","SARS-CoV-2","ACACAGTAAACAAACT",1,4.05,NA,NA,NA,NA,NA,NA,"stop","G9* Y21I V37R Y123W G146C Y159L V182H",7
"lib2","SARS-CoV-2","ACACAGTAATACGGTG",4,119.11,9.93,-0.91,0.06,2.29,1.03,0,">1 nonsynonymous","A18R D90Q T100A",3
"lib2","SARS-CoV-2","ACACAGTAGATATTTT",8,73.59,9.8,-1.03,0.09,2.18,1.07,0,">1 nonsynonymous","V52F L131F",2
"lib2","SARS-CoV-2","ACACAGTGAGTTATAA",8,472.5,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N4S N24W N64A R127C Y178K",5
"lib2","SARS-CoV-2","ACACAGTTAATATCTG",4,20.87,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A33W P133V G146L K199Q",4
"lib2","SARS-CoV-2","ACACAGTTCATATAAT",6,100.97,10.51,-0.32,0.05,2.87,1.09,0,">1 nonsynonymous","D90S N151S",2
"lib2","SARS-CoV-2","ACACAGTTGTTGTACC",3,48.85,8.57,-2.26,0.16,1.66,1.09,0.01,">1 nonsynonymous","W23K I28W T148A",3
"lib2","SARS-CoV-2","ACACAGTTTTATCTAA",16,47.29,6,-4.84,0.84,1.5,1.14,0.01,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","ACACATAAAAACATTC",5,29.37,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V37T P82T R124Y",3
"lib2","SARS-CoV-2","ACACATAAACCTAACG",1,5.54,10.85,0.01,0.17,3,1,0.01,">1 nonsynonymous","V115A N130P T201A",3
"lib2","SARS-CoV-2","ACACATAACCCCGCGG",1,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","ACACATAAGATAGCAT",3,16.19,6,-4.84,2,3,1.33,0.02,">1 nonsynonymous","N40S I104R N130A P149W",4
"lib2","SARS-CoV-2","ACACATAAGTGCATCA",13,66.77,10.63,-0.21,0.04,2.83,1.16,0,">1 nonsynonymous","T55N E141A T148I",3
"lib2","SARS-CoV-2","ACACATAATAGTAGGT",9,206.8,9.78,-1.06,0.07,2.47,1.05,0,">1 nonsynonymous","F44E I138G",2
"lib2","SARS-CoV-2","ACACATAATGCCATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V C61I F99M K128P",4
"lib2","SARS-CoV-2","ACACATAATGTAACAA",5,0.46,NA,NA,NA,NA,NA,NA,"stop","A42Q T55C D90Y T170* P197K",5
"lib2","SARS-CoV-2","ACACATACAGAATCAA",7,82.44,6,-4.84,1.25,1.5,1.11,0,">1 nonsynonymous","K87D Y143P Y175V",3
"lib2","SARS-CoV-2","ACACATACGCACTCTT",3,36.27,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39M C61I R124S D137R",4
"lib2","SARS-CoV-2","ACACATAGACCGAAAT",3,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D G51T F99C N171D",4
"lib2","SARS-CoV-2","ACACATAGCAATTAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S41D F99D A190* K199H",4
"lib2","SARS-CoV-2","ACACATAGGATTTCCC",6,78.3,9.91,-0.93,0.08,2.13,1.04,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","ACACATATCCTAGAAT",8,77.52,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K94I Y119G S129H S139N G155C G166M",6
"lib2","SARS-CoV-2","ACACATATTTCCCCGA",2,27.07,10.76,-0.08,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACATCAAAACAGTG",3,15.38,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","I2N S41T N64L N92F A105V",5
"lib2","SARS-CoV-2","ACACATCAAAGGTAAA",5,117.74,9.53,-1.31,0.04,2.9,1.1,0,">1 nonsynonymous","Y119N P149L",2
"lib2","SARS-CoV-2","ACACATCAAGGCCGCA",5,46.19,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C6V N13Y Y21I Y39M S45L A67L C102L F134N",8
"lib2","SARS-CoV-2","ACACATCACCGTCCCC",4,94.3,10.8,-0.03,0.06,2.88,1.14,0,">1 nonsynonymous","N4G T201P",2
"lib2","SARS-CoV-2","ACACATCAGCTAGTTA",9,87.45,9.96,-0.88,0.03,2.99,1.02,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","ACACATCATAACACCA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S K87A C102M S147I",4
"lib2","SARS-CoV-2","ACACATCATATACATA",4,11.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C49Q V180N",2
"lib2","SARS-CoV-2","ACACATCCCACGTTTA",1,20.31,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A81E Q176P",2
"lib2","SARS-CoV-2","ACACATCCTAAAACCC",8,3.6,NA,NA,NA,NA,NA,NA,"stop","W23S I72* I88R F167V",4
"lib2","SARS-CoV-2","ACACATCCTTTGATAA",5,1.86,NA,NA,NA,NA,NA,NA,"stop","K94* D98F",2
"lib2","SARS-CoV-2","ACACATCTACTCTTAC",2,34.1,9.68,-1.16,0.08,2.95,1.07,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","ACACATCTCCGGACTA",10,5.86,NA,NA,NA,NA,NA,NA,"stop","S41N A105L S113T N157* Q168S S200Q",6
"lib2","SARS-CoV-2","ACACATCTGTAAAGGA",9,79.33,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R27A Y93N G146P",3
"lib2","SARS-CoV-2","ACACATGACACCTTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14K A33C A42M T63*",4
"lib2","SARS-CoV-2","ACACATGCCTGAGGGA",24,2.09,NA,NA,NA,NA,NA,NA,"stop","T55Q S69V Y93S W106* N118K",5
"lib2","SARS-CoV-2","ACACATGCGTTCGGGA",5,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F L38W Y91V K114E F160L Y178I",6
"lib2","SARS-CoV-2","ACACATGGCTAGTAAC",2,7.02,8.18,-2.65,0.4,1.5,1,0.04,">1 nonsynonymous","G51C S53L S139Q",3
"lib2","SARS-CoV-2","ACACATGGTATAAAAA",3,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53C D112S",2
"lib2","SARS-CoV-2","ACACATGTACGCAGAA",4,21.74,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","L60W G101W L122F A190T",4
"lib2","SARS-CoV-2","ACACATGTATTTTGCG",6,22.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41M G83S D90T N118A E135C S184N",6
"lib2","SARS-CoV-2","ACACATTAACACCGTG",2,40.21,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S36F A105F G146K L183N",4
"lib2","SARS-CoV-2","ACACATTAGGAAGCCT",3,6.39,NA,NA,NA,NA,NA,NA,"stop","E10* N40C V77A",3
"lib2","SARS-CoV-2","ACACATTATAGCTAAT",14,218.51,9.89,-0.94,0.07,2.37,1.06,0,"1 nonsynonymous","V20S",1
"lib2","SARS-CoV-2","ACACATTATGAACAGA",5,22.71,10.71,-0.13,0.07,2.97,1.06,0,">1 nonsynonymous","A42F T55S",2
"lib2","SARS-CoV-2","ACACATTCACACAGAA",11,140.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R127Q G166F",2
"lib2","SARS-CoV-2","ACACATTCCAACATAA",2,14.03,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","C31F I80N P96L",3
"lib2","SARS-CoV-2","ACACATTCCTGTTGAC",2,15.35,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","W23G T55D S129R P169G",4
"lib2","SARS-CoV-2","ACACATTCTCATACTT",2,9.89,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","G101N R127H",2
"lib2","SARS-CoV-2","ACACATTGAAGGATGG",6,29.38,9.81,-1.02,0.11,2.14,1,0,">1 nonsynonymous","A18F K94H P191Y",3
"lib2","SARS-CoV-2","ACACATTGTCTGCCAT",1,0.27,NA,NA,NA,NA,NA,NA,"stop","V77W D137G V153*",3
"lib2","SARS-CoV-2","ACACATTGTTATTTAC",9,101.22,10.73,-0.11,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACATTTCAGATTTC",7,1.79,NA,NA,NA,NA,NA,NA,"stop","Y66* A81I L122S Q144K",4
"lib2","SARS-CoV-2","ACACCAAAAAACATCT",7,96.04,9.48,-1.36,0.11,1.94,1.05,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","ACACCAAAAAACCGGC",2,88.96,7.74,-3.09,0.15,2.02,1.23,0.01,">1 nonsynonymous","K87I C158A",2
"lib2","SARS-CoV-2","ACACCAAAAATCATCT",2,17.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y39T I138W C158T",3
"lib2","SARS-CoV-2","ACACCAAAACACTGCT",11,161.52,10.78,-0.05,0.04,2.86,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCAAAACCATATT",2,29.87,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6R G117F R127M G155R",4
"lib2","SARS-CoV-2","ACACCAAAATACTTAG",4,3.84,NA,NA,NA,NA,NA,NA,"stop","I2K C61K D97T R124* V181R",5
"lib2","SARS-CoV-2","ACACCAAACAAAAGAT",6,117.3,9.73,-1.11,0.03,2.91,1.09,0,">1 nonsynonymous","I28M N40G K87M Y91M I104L",5
"lib2","SARS-CoV-2","ACACCAAAGAACGCGG",3,47.11,8.47,-2.37,0.3,1.5,1,0.04,">1 nonsynonymous","G9A R25W",2
"lib2","SARS-CoV-2","ACACCAAAGCACACGG",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q F12R S41M F47C",4
"lib2","SARS-CoV-2","ACACCAACATGCTACC",2,0,NA,NA,NA,NA,NA,NA,"stop","D59M K87E F99* K128* S139F Y175L",6
"lib2","SARS-CoV-2","ACACCAACGACACATA",8,87.67,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C61R Q84S Y93D N107V Q144C",5
"lib2","SARS-CoV-2","ACACCAAGCGAGGCTT",26,389.84,10.21,-0.62,0.04,2.81,1.03,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","ACACCAAGTCTTGCAT",6,51.06,8.5,-2.34,0.17,2.5,1.2,0.01,">1 nonsynonymous","N4S E10T L60G G166V P197S",5
"lib2","SARS-CoV-2","ACACCAATAAATGATG",1,45.26,10.8,-0.04,0.04,2.89,1.09,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","ACACCAATAAGACAAA",8,172.74,10.81,-0.02,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCAATAAGCCCTT",8,145.62,10.87,0.03,0.04,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCAATGTTTAACT",8,59.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13R N64L G86L N107K F185I A192P",6
"lib2","SARS-CoV-2","ACACCAATTAGATAAC",2,9.23,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V103P S113T L188H",3
"lib2","SARS-CoV-2","ACACCAATTCATTAGC",5,102.12,10.82,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCACATAGGACGG",5,29.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R27L K48A A89Q Y123T S129F",5
"lib2","SARS-CoV-2","ACACCACCAAGTCGCA",1,45.28,9.44,-1.4,0.16,1.72,1.08,0.01,">1 nonsynonymous","A14T L38N",2
"lib2","SARS-CoV-2","ACACCACCCCATGAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41R T55V I80* F99L Q168M",5
"lib2","SARS-CoV-2","ACACCACCCGAGTAGA",2,44.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9L R27P T46Q P161S Y178K",5
"lib2","SARS-CoV-2","ACACCACCGGGATGGT",6,6.79,NA,NA,NA,NA,NA,NA,"stop","F12* N40G",2
"lib2","SARS-CoV-2","ACACCACCTTTCTAAT",2,13.51,10.27,-0.57,0.07,2.4,1,0,">1 nonsynonymous","V37S E135L",2
"lib2","SARS-CoV-2","ACACCACGCAACTAGC",8,73.97,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8P V103E V173S",3
"lib2","SARS-CoV-2","ACACCACTAAGCGGGT",9,127.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56V N64E A89N R136Y I142N",5
"lib2","SARS-CoV-2","ACACCAGAACGCACGC",6,91.72,10.23,-0.6,0.05,2.85,1.05,0,">1 nonsynonymous","C6V T201S",2
"lib2","SARS-CoV-2","ACACCAGAATATCTCA",5,13.88,9.51,-1.32,0.2,2.07,1.26,0.02,">1 nonsynonymous","K26S V77T",2
"lib2","SARS-CoV-2","ACACCAGACGAAGGTA",5,47.2,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","T3D F12L Y35Q V103Y",4
"lib2","SARS-CoV-2","ACACCAGATGACGTTC",4,32.4,6,-4.84,2,1.5,1.22,0.03,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","ACACCAGATGGGCTTT",8,128.09,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","G74D S139A L162R F167K",4
"lib2","SARS-CoV-2","ACACCAGATTCTTAAA",4,58.77,7.82,-3.01,0.28,1.5,1.12,0.02,">1 nonsynonymous","A89N D98L F156V",3
"lib2","SARS-CoV-2","ACACCAGCACCGTTGC",1,24.67,7.98,-2.86,0.09,1.92,1.05,0,">1 nonsynonymous","S113L G117D N151Q",3
"lib2","SARS-CoV-2","ACACCAGCCAAGTCGA",15,11.41,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A42N I88N F134M",3
"lib2","SARS-CoV-2","ACACCAGCCCGACAGT",21,279.43,9.56,-1.27,0.05,2.92,1.06,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","ACACCAGCTTATCATT",7,67.66,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G9R V20M K48I T100Y",4
"lib2","SARS-CoV-2","ACACCAGGACAGGGTA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","L38Q K87M T100* N118S",4
"lib2","SARS-CoV-2","ACACCAGGTCCTGGTA",3,51.56,10.8,-0.04,0.06,2.94,1.07,0,">1 nonsynonymous","S53I V153F T201N",3
"lib2","SARS-CoV-2","ACACCAGTTATAGTTT",7,2.53,NA,NA,NA,NA,NA,NA,"stop","F44L F156Y T170*",3
"lib2","SARS-CoV-2","ACACCAGTTTTAACCC",2,5.95,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","W106D Q176E V182F",3
"lib2","SARS-CoV-2","ACACCATAAAAAATTC",4,0.19,NA,NA,NA,NA,NA,NA,"stop","N13H C49L C61V N107* N120M",5
"lib2","SARS-CoV-2","ACACCATAAGACCGAT",8,0,NA,NA,NA,NA,NA,NA,"stop","T15C Y143* L162P V194A",4
"lib2","SARS-CoV-2","ACACCATACAACGCAT",2,16.01,10.71,-0.13,0.07,3,1.04,0,">1 nonsynonymous","K56A T201F",2
"lib2","SARS-CoV-2","ACACCATATAAGATTA",2,23.27,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","Y21Q A105R F167L",3
"lib2","SARS-CoV-2","ACACCATATCGAAAAT",5,72.9,10.86,0.03,0.05,3,1.03,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","ACACCATATGCCAACG",6,60.97,9.94,-0.9,0.06,2.89,1,0,"1 nonsynonymous","Y121A",1
"lib2","SARS-CoV-2","ACACCATATGCGAGTC",2,19.81,6.18,-4.65,0.55,2.57,1.21,0.03,">1 nonsynonymous","L57A L162Q",2
"lib2","SARS-CoV-2","ACACCATCACAAATAT",3,91.7,9.38,-1.45,0.08,2.15,1.09,0,">1 nonsynonymous","D90F D98I I142L",3
"lib2","SARS-CoV-2","ACACCATCCTATAACA",9,177.49,10.73,-0.11,0.04,2.94,1.05,0,">1 nonsynonymous","I104V T201A",2
"lib2","SARS-CoV-2","ACACCATGCAGAGAAT",1,21.81,10.58,-0.25,0.04,2.92,1.06,0,">1 nonsynonymous","L38V V153Y",2
"lib2","SARS-CoV-2","ACACCATTCCGCAAAT",11,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W E10G T55I T148I",4
"lib2","SARS-CoV-2","ACACCATTTAGACTTT",2,32.99,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C61K R124C P197S",3
"lib2","SARS-CoV-2","ACACCCAAACATATGA",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H G101D S108K",3
"lib2","SARS-CoV-2","ACACCCAAATGCTTAA",1,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N I104E F160A",3
"lib2","SARS-CoV-2","ACACCCAAGTGTTCCG",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G A14L I80W",3
"lib2","SARS-CoV-2","ACACCCAATAAGACAA",3,40.56,10.07,-0.77,0.09,2.67,1.06,0,">1 nonsynonymous","F44E F62T",2
"lib2","SARS-CoV-2","ACACCCAATAAGGAGA",1,30.46,10.76,-0.08,0.06,2.77,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCCAATACCTCAA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","D68M A105T Q144* L183F",4
"lib2","SARS-CoV-2","ACACCCAATGATAATT",6,65.19,9.3,-1.54,0.09,1.94,1.06,0,">1 nonsynonymous","P7L N24G T55W D98A",4
"lib2","SARS-CoV-2","ACACCCACCTAGCCAA",4,49.08,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N40S F62K K94E V103L I142E N157F",6
"lib2","SARS-CoV-2","ACACCCACGATATGTA",4,27.04,9.95,-0.89,0.08,2.17,1,0,">1 nonsynonymous","C61M Y91R",2
"lib2","SARS-CoV-2","ACACCCACTGCACTGA",2,7.07,6,-4.84,2,3,1.01,0,">1 nonsynonymous","L5M N58S P133D L162R",4
"lib2","SARS-CoV-2","ACACCCCAACCGCTAG",3,10.67,7.39,-3.44,0.32,1.72,1.19,0.02,">1 nonsynonymous","V11L Y91L T100L Y121C",4
"lib2","SARS-CoV-2","ACACCCCCCCATACTA",1,7.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46A G86I G146R F156H",4
"lib2","SARS-CoV-2","ACACCCCCGCTCAGAA",2,10.43,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F12E A89L",2
"lib2","SARS-CoV-2","ACACCCCGCGTACAGC",4,68.81,10.23,-0.6,0.05,2.81,1.02,0,"1 nonsynonymous","D34A",1
"lib2","SARS-CoV-2","ACACCCCTCGCGGTGG",3,80.89,10.8,-0.03,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCCGACGGACTTG",10,0.38,NA,NA,NA,NA,NA,NA,"stop","V37* T170Q R179Q",3
"lib2","SARS-CoV-2","ACACCCGATGCTTAAC",4,173.73,8.74,-2.09,0.08,2.9,1.1,0,">1 nonsynonymous","D90K F126R",2
"lib2","SARS-CoV-2","ACACCCGCCTTGCGAT",21,6.51,NA,NA,NA,NA,NA,NA,"stop","K26* P161V",2
"lib2","SARS-CoV-2","ACACCCGTCGATGAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59R S139H",2
"lib2","SARS-CoV-2","ACACCCTACTGTGAAA",8,85.59,9.84,-1,0.06,2.86,1.01,0,">1 nonsynonymous","N58Y V115G",2
"lib2","SARS-CoV-2","ACACCCTAGTCTAGTT",13,81.88,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F12R S113L",2
"lib2","SARS-CoV-2","ACACCCTCAGAATCTC",5,130.35,9.63,-1.2,0.06,2.12,1.04,0,">1 nonsynonymous","F12T R27D",2
"lib2","SARS-CoV-2","ACACCCTCGAAACCTA",6,13.97,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C61F G86Q K94P V103N G116Y F134E",6
"lib2","SARS-CoV-2","ACACCCTTATGGAAAG",9,118.13,9.8,-1.04,0.08,2.16,1.05,0,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","ACACCGAAGCATAACA",7,2.01,NA,NA,NA,NA,NA,NA,"stop","W23T D59K P82* Y91Q V103P L162K",6
"lib2","SARS-CoV-2","ACACCGACAATCCTAA",3,60.78,10.05,-0.78,0.07,2.66,1.06,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","ACACCGACAGCCCAAG",10,145.86,10.64,-0.2,0.06,2.87,1.1,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","ACACCGCCACTGTGAA",16,189.63,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","A18N L60K A67S P96S W106M N151F",6
"lib2","SARS-CoV-2","ACACCGCGCAACTAGC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","W23* W106Y P161T G172Y",4
"lib2","SARS-CoV-2","ACACCGCGCACATACA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* C61Q G166S",3
"lib2","SARS-CoV-2","ACACCGCTAACCCATT",6,0.6,NA,NA,NA,NA,NA,NA,"stop","T63S Y66D D98A K132W T170*",5
"lib2","SARS-CoV-2","ACACCGCTGCAGAGGG",13,75.73,7.87,-2.96,0.29,1.5,1.08,0.03,">1 nonsynonymous","C6V K87N C102L G152D",4
"lib2","SARS-CoV-2","ACACCGCTGCCCATGA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","K128* C150M Y159T",3
"lib2","SARS-CoV-2","ACACCGGAAATGAGTT",1,52.87,10.65,-0.19,0.05,2.89,1.11,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","ACACCGGAGGCAATTT",15,344.8,8.79,-2.04,0.05,2.85,1.1,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","ACACCGGATCAACTAG",6,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y Y165S",2
"lib2","SARS-CoV-2","ACACCGGGTGCTACGA",2,11.7,6.23,-4.61,0.7,3,1.19,0.02,">1 nonsynonymous","C61N D68Q",2
"lib2","SARS-CoV-2","ACACCGTAACCACCAT",4,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110F I138G P149C E154Y L183R",5
"lib2","SARS-CoV-2","ACACCGTAATTAAACT",4,74.36,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G101V G146T V180R E186D P197L",5
"lib2","SARS-CoV-2","ACACCGTCTGAGCAAA",1,10.25,9.48,-1.36,0.34,1.5,1,0.05,">1 nonsynonymous","F17L T55K Y121H",3
"lib2","SARS-CoV-2","ACACCGTTACTCAATA",1,19.93,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","E10R P82M F99N G152V L162Q",5
"lib2","SARS-CoV-2","ACACCTAAGAAACTAT",11,103.14,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V77Y G83S A145I",3
"lib2","SARS-CoV-2","ACACCTAAGGCAAAAT",2,32.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D90F R124Q",2
"lib2","SARS-CoV-2","ACACCTACACGGGTCA",4,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P S45I D90K K94F L95V G116V T148Y",7
"lib2","SARS-CoV-2","ACACCTACCGACTGGA",3,35.4,9.64,-1.2,0.15,1.8,1.1,0.01,"1 nonsynonymous","G86A",1
"lib2","SARS-CoV-2","ACACCTACCGCTTATA",7,4.84,NA,NA,NA,NA,NA,NA,"stop","A22T A42T Y91L T201*",4
"lib2","SARS-CoV-2","ACACCTACCGGGAGAG",2,24.25,6.14,-4.7,0.78,1.5,1.08,0.02,">1 nonsynonymous","F62T C150W",2
"lib2","SARS-CoV-2","ACACCTACTAGAACGC",2,72.78,10.85,0.01,0.06,2.92,1.08,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","ACACCTACTCAAAAAT",2,36.56,9.64,-1.19,0.1,2.01,1,0,"1 nonsynonymous","P96V",1
"lib2","SARS-CoV-2","ACACCTACTGGGCAGT",6,56.46,8.07,-2.76,0.13,1.5,1.04,0.01,">1 nonsynonymous","G9E A89D",2
"lib2","SARS-CoV-2","ACACCTAGGCGTAAAC",4,169.32,10.01,-0.82,0.03,2.84,1.03,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","ACACCTATACGGTTTA",6,30.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M C49V D90M P149S C195F",5
"lib2","SARS-CoV-2","ACACCTATAGAGAGAT",7,21.23,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C6L I88G N151G",3
"lib2","SARS-CoV-2","ACACCTATCTACATTT",9,22.2,6,-4.84,1.2,1.5,1.18,0.02,">1 nonsynonymous","T15F G86A P149S",3
"lib2","SARS-CoV-2","ACACCTATTACATGAA",5,0.83,NA,NA,NA,NA,NA,NA,"stop","S36G L60* T201R",3
"lib2","SARS-CoV-2","ACACCTCAACTGAAAC",1,1.62,NA,NA,NA,NA,NA,NA,"stop","F12L Y39* F47H V103I D112W Q144A",6
"lib2","SARS-CoV-2","ACACCTCAAGACCAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","P54T N64* N120K I138D C158L F167Y",6
"lib2","SARS-CoV-2","ACACCTCAGTGATCTA",3,17.37,9.49,-1.35,0.14,2.53,1.06,0.01,">1 nonsynonymous","C6L K114L",2
"lib2","SARS-CoV-2","ACACCTCCCATTTTAG",3,34.45,9.45,-1.39,0.11,1.98,1.06,0.01,">1 nonsynonymous","G51R K94Y",2
"lib2","SARS-CoV-2","ACACCTCGAAATACGA",5,52.09,10.9,0.06,0.07,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACCTCGAATGGTAT",7,133.5,10.72,-0.11,0.03,2.92,1.07,0,">1 nonsynonymous","P54N N130A",2
"lib2","SARS-CoV-2","ACACCTCTAACCTCAA",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C E141K G155N",3
"lib2","SARS-CoV-2","ACACCTCTCTAAGTTA",11,6.01,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","ACACCTCTCTTTTGCG",2,51.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T140I P177M S184V",3
"lib2","SARS-CoV-2","ACACCTCTGTATCGTA",4,36.09,9.6,-1.24,0.08,2.29,1.09,0,">1 nonsynonymous","Y35T N58D T85L",3
"lib2","SARS-CoV-2","ACACCTGACAATCTAA",9,156.57,10.76,-0.07,0.04,2.93,1.05,0,"1 nonsynonymous","S41E",1
"lib2","SARS-CoV-2","ACACCTGACTGTACGA",3,56.42,10.59,-0.24,0.06,2.84,1.1,0,">1 nonsynonymous","D98V S129R T148K",3
"lib2","SARS-CoV-2","ACACCTGCCATATGAT",4,44.92,6.35,-4.49,0.71,1.5,1.27,0.03,"1 nonsynonymous","V77N",1
"lib2","SARS-CoV-2","ACACCTGTGCTACAGC",5,41.25,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D34R G101R N171A T201L",4
"lib2","SARS-CoV-2","ACACCTGTTATTAACA",3,40.76,6,-4.84,2,3,1.23,0,">1 nonsynonymous","V32F F44L N58S Y66E T85L",5
"lib2","SARS-CoV-2","ACACCTTAACAAATGC",9,61.68,8.66,-2.18,0.13,2.44,1.06,0.01,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","ACACCTTACGTTATAG",3,5.55,NA,NA,NA,NA,NA,NA,"stop","G9S Y35R K114* Y119C Y143L",5
"lib2","SARS-CoV-2","ACACCTTCATCTCTAA",5,76.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30A F47V V65K",3
"lib2","SARS-CoV-2","ACACCTTCCACGTGAG",3,29.01,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","C6K A89K G155E",3
"lib2","SARS-CoV-2","ACACCTTGCGTGTATA",2,10.78,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11I N120K P133L R179A V180I",5
"lib2","SARS-CoV-2","ACACCTTTACCCATGT",7,1.04,NA,NA,NA,NA,NA,NA,"stop","K114S Y143H P149* S200D",4
"lib2","SARS-CoV-2","ACACCTTTACTTATAA",12,183.13,9.27,-1.56,0.02,2.9,1.07,0,">1 nonsynonymous","K56V K87S F156W Q168S",4
"lib2","SARS-CoV-2","ACACGAAAAAATACTG",2,10.38,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5P S29M G101L R127S G146L C158S",6
"lib2","SARS-CoV-2","ACACGAAAAATTAAGC",3,42.31,10.84,0,0.06,2.86,1.16,0,">1 nonsynonymous","R27K N120K",2
"lib2","SARS-CoV-2","ACACGAAAATATCACG",4,11.09,6.51,-4.33,0.61,1.5,1.14,0.03,">1 nonsynonymous","P54R F70K D90N A105D G146A A190S",6
"lib2","SARS-CoV-2","ACACGAAACGCCCTGA",16,121.42,10.84,0.01,0.05,2.95,1.07,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","ACACGAAACGTAGAAA",24,193.2,6.44,-4.39,0.25,1.51,1.15,0,">1 nonsynonymous","A14R R124S",2
"lib2","SARS-CoV-2","ACACGAAATTGTTGCA",5,55.32,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D98Y Y119P R127W V173T",4
"lib2","SARS-CoV-2","ACACGAACAAGAACCA",2,88.97,10.83,-0.01,0.06,2.9,1.08,0,"1 nonsynonymous","L122F",1
"lib2","SARS-CoV-2","ACACGAACACGCATAG",3,41.57,8.42,-2.41,0.15,1.9,1.04,0.01,">1 nonsynonymous","R127S N171G",2
"lib2","SARS-CoV-2","ACACGAAGAGATGGTA",3,13.35,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","S19L Y119T R136P V181H",4
"lib2","SARS-CoV-2","ACACGAAGATAATCAT",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E N58D K87T P96Q T170S",5
"lib2","SARS-CoV-2","ACACGAAGCGCCATTT",2,20.91,10.66,-0.17,0.08,2.9,1.11,0,">1 nonsynonymous","S43L C61Y",2
"lib2","SARS-CoV-2","ACACGAAGTTGAAGAT",7,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T A33M C49Y W106M T170N",5
"lib2","SARS-CoV-2","ACACGAATATATGCAA",11,76.85,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D90V D112K R127L Y143H G152V",5
"lib2","SARS-CoV-2","ACACGAATTGGAATTA",1,18.9,10.69,-0.15,0.1,2.7,1.3,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACGACAACCCTGAT",3,57.58,10.93,0.09,0.06,2.96,1.05,0,"1 nonsynonymous","K128E",1
"lib2","SARS-CoV-2","ACACGACATATCACGG",5,44.55,8.85,-1.98,0.12,1.5,1.15,0.01,">1 nonsynonymous","F12K R16L",2
"lib2","SARS-CoV-2","ACACGACATCCCATTA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L N40C A81T D97M K132P",5
"lib2","SARS-CoV-2","ACACGACATGTATGGA",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A C6M V182L",3
"lib2","SARS-CoV-2","ACACGACCAAACTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N24P S41* K132T G146K G166K",5
"lib2","SARS-CoV-2","ACACGACCAAATATTG",5,65.86,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S108P Y121L T170S",3
"lib2","SARS-CoV-2","ACACGACCAATAAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91D K128I P133R",3
"lib2","SARS-CoV-2","ACACGACCATGGACAT",2,92.98,9.95,-0.88,0.07,2.39,1.05,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","ACACGACCGGTGCGAA",5,40.52,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","ACACGACTAACGCTCT",9,0.15,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","ACACGACTAATGTTAG",13,93.05,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N13L K26T C49Y F70S A89E R127D P133H",7
"lib2","SARS-CoV-2","ACACGACTAGCAATTC",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q K87I W106S N151Q",4
"lib2","SARS-CoV-2","ACACGACTCATAACAA",6,46.54,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4F S36T S41A G86W F160Y",5
"lib2","SARS-CoV-2","ACACGACTGGCCTCGA",5,79.67,10.69,-0.15,0.03,2.94,1.05,0,">1 nonsynonymous","T55V T85R V173C",3
"lib2","SARS-CoV-2","ACACGACTTCAGTTTC",2,26.89,8.77,-2.07,0.37,1.5,1.09,0.08,"1 nonsynonymous","V181S",1
"lib2","SARS-CoV-2","ACACGAGATGTATGCG",16,3.15,NA,NA,NA,NA,NA,NA,"stop","C6K K56* C61S T170A",4
"lib2","SARS-CoV-2","ACACGAGCACAAGAAA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","I28S L95R Y121*",3
"lib2","SARS-CoV-2","ACACGAGCTTGCAAAG",2,7.89,6.71,-4.13,0.44,2.24,1.13,0.01,">1 nonsynonymous","T3L T46K V103T S108D C158Q",5
"lib2","SARS-CoV-2","ACACGAGGATATTAAG",3,1.11,NA,NA,NA,NA,NA,NA,"stop","S36L S45L T55* Y143T",4
"lib2","SARS-CoV-2","ACACGAGTAACAACTA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70Q T170K",2
"lib2","SARS-CoV-2","ACACGAGTCATTCTGT",8,48.11,6.03,-4.81,1.03,1.5,1.2,0.01,">1 nonsynonymous","R27S L131P",2
"lib2","SARS-CoV-2","ACACGAGTCCATCACT",5,0.61,NA,NA,NA,NA,NA,NA,"stop","G9C I28*",2
"lib2","SARS-CoV-2","ACACGATAACCTCGAG",6,0.49,NA,NA,NA,NA,NA,NA,"stop","P161R Q168*",2
"lib2","SARS-CoV-2","ACACGATCGTCTAAAT",6,140.37,10.82,-0.02,0.05,2.93,1.08,0,">1 nonsynonymous","N4A T201S",2
"lib2","SARS-CoV-2","ACACGATTCACAGGTG",10,276.57,10.12,-0.71,0.03,2.81,1.07,0,">1 nonsynonymous","N58T E141C H189Q",3
"lib2","SARS-CoV-2","ACACGATTGCAACAGG",7,107.35,9.87,-0.97,0.03,2.88,1.05,0,">1 nonsynonymous","D90E P169A",2
"lib2","SARS-CoV-2","ACACGATTGCATCGGA",2,1.36,NA,NA,NA,NA,NA,NA,"stop","L5Y D59* C102L V115L",4
"lib2","SARS-CoV-2","ACACGCAAGAGAAATA",11,274.84,10.01,-0.83,0.03,2.84,1.07,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","ACACGCACAAAAAAAC",10,126.22,9.08,-1.76,0.05,2.78,1.11,0,">1 nonsynonymous","D34R A42M G166V",3
"lib2","SARS-CoV-2","ACACGCACCTGAATTT",1,17.9,8.65,-2.19,0.18,2.78,1.07,0.02,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","ACACGCAGAAAAGATG",1,20.36,9.97,-0.86,0.1,2.14,1.05,0,">1 nonsynonymous","G9M R27T D90Y T140L",4
"lib2","SARS-CoV-2","ACACGCAGACATGCAT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39I T46L T63Y K114D P161C Q168S",6
"lib2","SARS-CoV-2","ACACGCATAGCTGGTT",5,17.49,7.72,-3.11,0.49,1.5,1.05,0.07,">1 nonsynonymous","G51E G83T P96K",3
"lib2","SARS-CoV-2","ACACGCATTTGTATGT",7,36.14,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F8N A22T K48S N58P T140D Q168L",6
"lib2","SARS-CoV-2","ACACGCCAAAATTAGG",9,123.35,10.28,-0.56,0.02,2.96,1.04,0,">1 nonsynonymous","K87N T140L",2
"lib2","SARS-CoV-2","ACACGCCAGCGACCAC",6,206.8,8.99,-1.84,0.06,2.72,1.07,0,">1 nonsynonymous","F44A N171G",2
"lib2","SARS-CoV-2","ACACGCCAGTCGGATT",3,10.63,6,-4.84,2,1.5,1.28,0.05,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","ACACGCCCTATCCGCC",9,96.77,10.36,-0.48,0.04,2.9,1.11,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","ACACGCCGAAAAACGT",11,5.51,NA,NA,NA,NA,NA,NA,"stop","I88N G101C S139T V173N Q176*",5
"lib2","SARS-CoV-2","ACACGCCTAATAACCT",4,16.5,10.29,-0.54,0.06,2.87,1.07,0,">1 nonsynonymous","Q144L Q168W",2
"lib2","SARS-CoV-2","ACACGCCTATTACTTG",3,24.16,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L5S R25S Y93T S184R",4
"lib2","SARS-CoV-2","ACACGCCTCATTTCCC",1,55.8,6.99,-3.85,0.27,1.5,1.11,0.02,">1 nonsynonymous","S36N L60F C158A",3
"lib2","SARS-CoV-2","ACACGCCTTCTACAGG",3,12.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R K94N R136K F185R A190R",5
"lib2","SARS-CoV-2","ACACGCGGACTTCAAG",12,113.34,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","E135I P177H",2
"lib2","SARS-CoV-2","ACACGCGTAAAATAGG",11,60.4,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60T G116E F167K",3
"lib2","SARS-CoV-2","ACACGCGTCCTTAATC",6,47.13,10.68,-0.15,0.05,2.91,1.04,0,"1 nonsynonymous","G51Q",1
"lib2","SARS-CoV-2","ACACGCTACAGGCTTT",3,17.49,8.5,-2.33,0.3,2.35,1.44,0.03,">1 nonsynonymous","D59F V71L",2
"lib2","SARS-CoV-2","ACACGGAAACACTACC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACACGGAAATCAAAAG",7,114.41,10.26,-0.58,0.05,2.85,1.06,0,">1 nonsynonymous","G9A A18Y A33F S41E Q79T",5
"lib2","SARS-CoV-2","ACACGGACATTTTTAC",8,97.48,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I28Q N171P",2
"lib2","SARS-CoV-2","ACACGGAGGAAACGGA",1,38.51,9.79,-1.04,0.1,2.72,1,0,">1 nonsynonymous","C6K T201K",2
"lib2","SARS-CoV-2","ACACGGATAGCTTACG",5,109.26,10.86,0.02,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACGGCATAGGCCAT",5,52.38,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F12S R27F L38W G86L K128A E141R F167T",7
"lib2","SARS-CoV-2","ACACGGCTGATAAAGA",6,61.79,10.58,-0.26,0.05,2.91,1.05,0,"1 nonsynonymous","A33I",1
"lib2","SARS-CoV-2","ACACGGCTTTAAAAAC",2,32.21,9.74,-1.09,0.04,2.9,1,0,">1 nonsynonymous","T3L L125G S184D",3
"lib2","SARS-CoV-2","ACACGGGAAAAAAACA",4,42.74,6,-4.84,1.89,1.5,1.17,0.02,">1 nonsynonymous","G9Q I138T C150W",3
"lib2","SARS-CoV-2","ACACGGGAACAACCGC",6,12.4,6.61,-4.23,2,3,1.23,0.01,">1 nonsynonymous","F99R W106M F167S",3
"lib2","SARS-CoV-2","ACACGGGACACTTAAA",6,8.93,8,-2.84,0.31,1.71,1.18,0.03,">1 nonsynonymous","T15W W106S",2
"lib2","SARS-CoV-2","ACACGGGAGAAGGTCC",1,3.71,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACACGGGAGCAGCACT",4,41.52,8.9,-1.94,0.13,2.12,1.06,0.01,">1 nonsynonymous","C61P D98Y Y121I S147A",4
"lib2","SARS-CoV-2","ACACGGGCTGAATCAG",1,2.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","ACACGGTAATGAAAGG",1,2.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11P",1
"lib2","SARS-CoV-2","ACACGGTGGTACAGAA",8,40.87,9.08,-1.75,0.09,2.09,1.05,0,">1 nonsynonymous","W106S S147G S164G",3
"lib2","SARS-CoV-2","ACACGGTTAAACTTGG",4,26.3,9.77,-1.07,0.16,2.26,1.06,0.01,">1 nonsynonymous","C6V T15A D97C",3
"lib2","SARS-CoV-2","ACACGTACCAAGAAGG",5,189.88,9.19,-1.65,0.06,2.93,1.09,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","ACACGTACTAACGTAA",4,92.79,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N64F I88N Q144V F167S",4
"lib2","SARS-CoV-2","ACACGTAGATTAGCAA",5,40.63,9.99,-0.84,0.07,2.77,1.01,0,">1 nonsynonymous","V11Y D59A",2
"lib2","SARS-CoV-2","ACACGTAGTTTTTGAT",5,28.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D34G V77C P82V",3
"lib2","SARS-CoV-2","ACACGTATTGGTGGCT",4,70.73,10.83,-0.01,0.04,2.99,1.02,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","ACACGTCAAAAATAAA",5,88.39,8.77,-2.07,0.13,1.53,1.14,0.01,">1 nonsynonymous","N40L D90R N151S S164F",4
"lib2","SARS-CoV-2","ACACGTCAATAAACAA",3,20.5,9.54,-1.3,0.1,2.85,1.14,0.01,">1 nonsynonymous","Y121L G174R",2
"lib2","SARS-CoV-2","ACACGTCACAACTCAT",1,39.86,10.85,0.01,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACGTCACTGTACAA",1,12.22,7.47,-3.36,0.52,1.59,1.23,0.04,">1 nonsynonymous","N13E G83N I88M",3
"lib2","SARS-CoV-2","ACACGTCCCAGCACAC",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G A81T Y91S S113Q",4
"lib2","SARS-CoV-2","ACACGTCCTACCATAA",3,27.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50Q L60F T85P P149Y V153S H189F",6
"lib2","SARS-CoV-2","ACACGTCGAGGGCACA",3,37.5,9.3,-1.54,0.16,1.5,1.06,0.01,">1 nonsynonymous","C49Y Y50F",2
"lib2","SARS-CoV-2","ACACGTCTTAGGCTAA",1,21.3,9.93,-0.91,0.27,1.79,1.12,0.05,">1 nonsynonymous","D34L F134S",2
"lib2","SARS-CoV-2","ACACGTGAATAAGATA",4,105.04,8.29,-2.55,0.11,2.32,1.06,0,">1 nonsynonymous","S41D L122K P161R",3
"lib2","SARS-CoV-2","ACACGTGAGGAGCGCC",1,0.17,NA,NA,NA,NA,NA,NA,"stop","K56I S69L K87H R136*",4
"lib2","SARS-CoV-2","ACACGTGATGCCATGA",2,72.46,10.59,-0.25,0.06,2.79,1.12,0,">1 nonsynonymous","N64P I138R T201N",3
"lib2","SARS-CoV-2","ACACGTGCAAGCAGTG",4,119.9,9.74,-1.09,0.04,2.87,1.08,0,">1 nonsynonymous","N110L Y143W",2
"lib2","SARS-CoV-2","ACACGTGCAGAACACA",6,41.9,10.69,-0.15,0.11,2.8,1.12,0,">1 nonsynonymous","G9N F134L",2
"lib2","SARS-CoV-2","ACACGTGCGTCAATAC",2,52.08,10.8,-0.03,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACGTTCCCTTTCGA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S G101S",2
"lib2","SARS-CoV-2","ACACGTTGAACGACGA",4,7.17,6.21,-4.62,1.12,3,1.14,0,">1 nonsynonymous","V71T L122Y P133L",3
"lib2","SARS-CoV-2","ACACGTTTCGCGTTGG",2,17.89,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C61L W106F Y119D G146M",4
"lib2","SARS-CoV-2","ACACGTTTGAATCGTT",13,148.82,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P96S V103K Y119P N151L",4
"lib2","SARS-CoV-2","ACACTAAAAAGATGGT",2,12.26,10.24,-0.6,0.09,2.95,1,0,">1 nonsynonymous","D98L G152H",2
"lib2","SARS-CoV-2","ACACTAAAAGGTTTCT",3,73.12,10.75,-0.09,0.06,2.83,1.16,0,"1 nonsynonymous","T140V",1
"lib2","SARS-CoV-2","ACACTAAAATCGAAGT",8,78.7,8.74,-2.1,0.09,2.9,1.05,0,">1 nonsynonymous","Y123F K132V Y175L",3
"lib2","SARS-CoV-2","ACACTAAACATGAGTG",6,74.98,8.75,-2.09,0.11,1.52,1.1,0.01,">1 nonsynonymous","A105I E135T",2
"lib2","SARS-CoV-2","ACACTAAACATGGTAT",1,41.12,6,-4.84,2,1.5,1.38,0.03,">1 nonsynonymous","T3A Y35R K132T I142G Y178K S184E",6
"lib2","SARS-CoV-2","ACACTAAACCGGTACC",3,30.79,9,-1.84,0.35,1.5,1.07,0.07,">1 nonsynonymous","V11S K26M T100S",3
"lib2","SARS-CoV-2","ACACTAAACTTAATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* E141N P149V",3
"lib2","SARS-CoV-2","ACACTAACGAATGGAA",4,7.65,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L60G S69E P82A",3
"lib2","SARS-CoV-2","ACACTAACTAACCGGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36K D112F P133D Y165K",4
"lib2","SARS-CoV-2","ACACTAACTTAATTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5* T55Q P191Q",3
"lib2","SARS-CoV-2","ACACTAACTTCGTATG",6,133.66,10.06,-0.78,0.05,2.82,1.08,0,"1 nonsynonymous","T170M",1
"lib2","SARS-CoV-2","ACACTAACTTTCACCC",17,59.15,6,-4.84,2,1.5,1.25,0.01,"1 nonsynonymous","I80K",1
"lib2","SARS-CoV-2","ACACTAATAAAAGTCC",10,162.2,9.31,-1.53,0.12,1.5,1.06,0.01,">1 nonsynonymous","V11S F17H",2
"lib2","SARS-CoV-2","ACACTAATAGAATTAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13T",1
"lib2","SARS-CoV-2","ACACTAATCCTGGAGT",7,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K S41I I104F",3
"lib2","SARS-CoV-2","ACACTAATCGCCAGAG",6,0.09,NA,NA,NA,NA,NA,NA,"stop","G9* F44V K87R G101W",4
"lib2","SARS-CoV-2","ACACTAATGTTTTAGC",6,584.75,8.31,-2.52,0.12,2.29,1.03,0.01,">1 nonsynonymous","G9L Y119N E135V",3
"lib2","SARS-CoV-2","ACACTAATTGCCTAAA",5,54.59,6,-4.84,1.71,1.5,1.14,0.01,">1 nonsynonymous","Y91H S108I",2
"lib2","SARS-CoV-2","ACACTACAAAATCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40L S53* Y91F N107L",4
"lib2","SARS-CoV-2","ACACTACAAAGAACAA",2,14.32,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A22W K87R D112M S129L F160P",5
"lib2","SARS-CoV-2","ACACTACAGTGTCTGA",4,121.15,9.3,-1.54,0.05,2.81,1.12,0,">1 nonsynonymous","A42M E141N G174V",3
"lib2","SARS-CoV-2","ACACTACATCAGCCCA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","C6* E10V V71S",3
"lib2","SARS-CoV-2","ACACTACCCAGGCCCC",1,40.15,6.2,-4.64,0.99,1.5,1.07,0.05,">1 nonsynonymous","D75Y G86I L122S T201S",4
"lib2","SARS-CoV-2","ACACTACCGGACTCGT",1,44.6,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C61L D90F N107S N120W K128L",5
"lib2","SARS-CoV-2","ACACTACGAGACACCC",1,43.81,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G155I Y159V G174I",3
"lib2","SARS-CoV-2","ACACTACGATAAGTGT",2,23.76,7.5,-3.33,0.2,1.5,1.03,0.01,">1 nonsynonymous","V65N Y119L L122F",3
"lib2","SARS-CoV-2","ACACTACGGACTGACA",3,1.89,NA,NA,NA,NA,NA,NA,"stop","Y39C F156*",2
"lib2","SARS-CoV-2","ACACTACGTATTTCTC",2,22.74,10.57,-0.26,0.08,2.81,1.15,0,">1 nonsynonymous","A42T D90R",2
"lib2","SARS-CoV-2","ACACTACTATAAAGGT",10,48.39,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49A Q84L",2
"lib2","SARS-CoV-2","ACACTACTATACTACT",7,4.31,NA,NA,NA,NA,NA,NA,"stop","A14P D59N G101Y W106*",4
"lib2","SARS-CoV-2","ACACTACTTCGGGGTC",6,45.03,10.68,-0.16,0.06,2.92,1.09,0,"1 nonsynonymous","D98H",1
"lib2","SARS-CoV-2","ACACTAGAACAAATCG",2,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T D112V",2
"lib2","SARS-CoV-2","ACACTAGAATGGCTAA",7,312.28,8.53,-2.31,0.1,2.98,1.04,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","ACACTAGATACTTGCC",1,28.34,10.09,-0.75,0.09,2.64,1.02,0,">1 nonsynonymous","T15V I138G",2
"lib2","SARS-CoV-2","ACACTAGATAGAGCAA",11,118.53,8.33,-2.51,0.11,1.94,1.09,0,">1 nonsynonymous","N4A T100C N107L T201E",4
"lib2","SARS-CoV-2","ACACTAGGCCAAACCT",10,28.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6N K48F A67P E135A I142Y",5
"lib2","SARS-CoV-2","ACACTAGGGAAATTGA",14,96.97,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","R179P",1
"lib2","SARS-CoV-2","ACACTAGTCAATACAA",2,45.95,8.48,-2.35,0.14,1.96,1.07,0.01,"1 nonsynonymous","Y121G",1
"lib2","SARS-CoV-2","ACACTATAAGTGCAAT",1,19.42,6,-4.84,2,1.5,1.25,0.06,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","ACACTATACTAACGAT",3,32.63,6,-4.84,2,3,1.06,0,">1 nonsynonymous","G86T C150N G172R P197S",4
"lib2","SARS-CoV-2","ACACTATAGAAACAAG",3,20.87,9.84,-1,0.1,2.08,1.01,0.01,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","ACACTATAGGTAACAC",16,130.26,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K87A Y93S",2
"lib2","SARS-CoV-2","ACACTATCGACCTGGC",17,146.6,9.15,-1.68,0.05,2.63,1.04,0,">1 nonsynonymous","Y91V I104L F156V",3
"lib2","SARS-CoV-2","ACACTATCTAATCATG",1,19.86,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D112L D137S Q163F",3
"lib2","SARS-CoV-2","ACACTATCTCGGTCCG",1,15.14,10.67,-0.16,0.18,2.77,1.17,0.02,">1 nonsynonymous","T3K S41H Y175F",3
"lib2","SARS-CoV-2","ACACTATCTGCCATCT",2,24.68,10.87,0.03,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTATGGCCGGGAT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86K R136I",2
"lib2","SARS-CoV-2","ACACTCAAACATGCAC",1,14.01,10.31,-0.53,0.09,2.86,1.03,0.01,">1 nonsynonymous","S41N F99M T140G",3
"lib2","SARS-CoV-2","ACACTCAAAGAAGGGT",3,51.91,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F12S L60H L111T G155I",4
"lib2","SARS-CoV-2","ACACTCAACTTCTTCA",14,279.54,9.93,-0.91,0.06,2.3,1.01,0,">1 nonsynonymous","V11H S200L",2
"lib2","SARS-CoV-2","ACACTCAAGATGACCA",5,0.62,NA,NA,NA,NA,NA,NA,"stop","S53* E154N S164R Y175F K198H",5
"lib2","SARS-CoV-2","ACACTCAATTCACAAA",10,206.04,9.9,-0.93,0.06,2.38,1.07,0,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","ACACTCACACCAGGGT",2,76.43,8.69,-2.14,0.1,1.7,1.07,0,">1 nonsynonymous","C6H V173S",2
"lib2","SARS-CoV-2","ACACTCACAGCTATGG",3,58.24,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R73C R127H S139Y",3
"lib2","SARS-CoV-2","ACACTCACAGTTCCAA",2,25.61,10.39,-0.45,0.11,2.75,1.18,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","ACACTCACCTATCGAA",4,15.08,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D68A P96Y C102S D112V V153Y T170Q",6
"lib2","SARS-CoV-2","ACACTCAGAGGATAAT",7,1.18,NA,NA,NA,NA,NA,NA,"stop","R27I F44L R78S F99T Q168V V182S T201*",7
"lib2","SARS-CoV-2","ACACTCATATTTAGTT",2,46.2,10.74,-0.1,0.04,2.93,1.07,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","ACACTCATGTTAGAAA",15,91.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2Y D137K C150S N157Q G166H",5
"lib2","SARS-CoV-2","ACACTCCAACGTAGAC",1,6.94,10.72,-0.12,0.1,3,1.03,0,">1 nonsynonymous","K114M L122S Y178V",3
"lib2","SARS-CoV-2","ACACTCCAATTGTGCA",1,35.36,10,-0.83,0.12,2.35,1.07,0,"1 nonsynonymous","G51F",1
"lib2","SARS-CoV-2","ACACTCCATGTGGAAC",8,56.54,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S36M A89M Q144I C150R T201L",5
"lib2","SARS-CoV-2","ACACTCCGATACCCAA",12,67.34,6.49,-4.34,0.58,1.5,1.24,0.03,">1 nonsynonymous","I88F Y121L",2
"lib2","SARS-CoV-2","ACACTCCTACACATAG",2,12.12,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","N171K",1
"lib2","SARS-CoV-2","ACACTCCTTAGTAATG",11,8.65,NA,NA,NA,NA,NA,NA,"stop","C6D Q84F Y91G F99P Y119* T170S",6
"lib2","SARS-CoV-2","ACACTCGACGGTTTTG",5,93.47,9.33,-1.51,0.03,2.96,1.07,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ACACTCGTACAGAGGA",1,13.32,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y35C S43L G51A F185C",4
"lib2","SARS-CoV-2","ACACTCGTGCGAGTTG",2,78.77,10.28,-0.56,0.03,2.99,1.02,0,">1 nonsynonymous","C61W P149S G174A",3
"lib2","SARS-CoV-2","ACACTCGTTCGCATTA",1,8.85,8.07,-2.77,0.13,1.5,1,0,">1 nonsynonymous","C6G K56V K87Q Y119F P133H A192T",6
"lib2","SARS-CoV-2","ACACTCTATGTGAGAG",9,126.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G146L V173S",2
"lib2","SARS-CoV-2","ACACTCTGAGTATACG",4,58.16,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","F17I S43F L57E D90A T140M",5
"lib2","SARS-CoV-2","ACACTCTGTATACAAG",2,0.58,NA,NA,NA,NA,NA,NA,"stop","V32E Y50I W106* G117L P149M",5
"lib2","SARS-CoV-2","ACACTCTTGTACAACT",2,7.89,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19A E76T E141F",3
"lib2","SARS-CoV-2","ACACTGAAAACCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L188N T201K",2
"lib2","SARS-CoV-2","ACACTGAACAACTAAC",3,101.24,10.49,-0.35,0.04,2.97,1.05,0,"1 nonsynonymous","K87W",1
"lib2","SARS-CoV-2","ACACTGAACATCACTA",1,0.83,NA,NA,NA,NA,NA,NA,"stop","N24Y S139N K199*",3
"lib2","SARS-CoV-2","ACACTGAACATGATAT",4,11.96,9.87,-0.97,0.15,2.1,1,0.01,">1 nonsynonymous","I72L V182C",2
"lib2","SARS-CoV-2","ACACTGAATTGTGGGA",2,16.52,9.51,-1.33,0.08,2.86,1.16,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","ACACTGACCAGAGAGC",17,141.1,8.67,-2.17,0.21,1.5,1.03,0.02,">1 nonsynonymous","A81H W106M",2
"lib2","SARS-CoV-2","ACACTGACGTCGAAAT",6,47.15,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5V L95P Y143M G152L",4
"lib2","SARS-CoV-2","ACACTGACTGTGCATA",3,1.45,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib2","SARS-CoV-2","ACACTGAGACACGTAA",12,208.95,10.49,-0.35,0.03,2.94,1.05,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","ACACTGAGCTTGAAAG",5,26.19,8.83,-2,0.22,1.5,1,0.02,">1 nonsynonymous","S36A P82S V153A",3
"lib2","SARS-CoV-2","ACACTGATAAACTCAA",1,13.68,10.87,0.03,0.07,2.82,1.21,0,"synonymous","",0
"lib2","SARS-CoV-2","ACACTGATATTTAACT",9,201.1,10.6,-0.24,0.04,2.94,1.05,0,">1 nonsynonymous","L122R G146W",2
"lib2","SARS-CoV-2","ACACTGATCAAACCTA",1,5.37,10.12,-0.72,0.4,2.4,1,0.02,">1 nonsynonymous","D90N F99Y",2
"lib2","SARS-CoV-2","ACACTGCAAACTGACA",22,143.15,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C31N N58Q T100F V180A T201C",5
"lib2","SARS-CoV-2","ACACTGCAGTACCCTG",8,137.79,9.92,-0.91,0.06,2.53,1.06,0,">1 nonsynonymous","G9Q I28S",2
"lib2","SARS-CoV-2","ACACTGCATTAAACGT",3,3.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","ACACTGCCCTATACAG",8,169.55,10.15,-0.69,0.05,2.71,1.02,0,">1 nonsynonymous","S53F I138S P149Q",3
"lib2","SARS-CoV-2","ACACTGCCGAGGCCCT",8,181.8,10.83,-0.01,0.05,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTGCCGATGTAAA",5,95.48,10.72,-0.12,0.07,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTGCGGGCGTGAC",9,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K D112E T140N G155S S184Y",5
"lib2","SARS-CoV-2","ACACTGCTACGACTAA",6,60.65,7.11,-3.72,0.24,1.5,1.16,0.01,">1 nonsynonymous","I72T W106V",2
"lib2","SARS-CoV-2","ACACTGCTCTTGCTAA",4,29.64,8.3,-2.53,0.32,1.5,1.01,0.05,">1 nonsynonymous","E10L R127S I142W",3
"lib2","SARS-CoV-2","ACACTGGAAAATTATC",10,192.25,10.82,-0.01,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTGGCATCGATAG",12,64.22,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I2F V20E A81I Q163N",4
"lib2","SARS-CoV-2","ACACTGGCGAAGAATT",2,15.86,10.48,-0.35,0.06,2.9,1.05,0,">1 nonsynonymous","A18F Y39W",2
"lib2","SARS-CoV-2","ACACTGGGGTGTGACC",7,64.88,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","I2N S139I F156I R179L",4
"lib2","SARS-CoV-2","ACACTGTAAATGTTTA",7,34.6,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A81Q I88Y G116N G146I",4
"lib2","SARS-CoV-2","ACACTGTCAAACCATA",2,6.2,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","T15C K94R N107V R127H",4
"lib2","SARS-CoV-2","ACACTGTTACGAACAG",12,94.28,6,-4.84,1.08,1.5,1.23,0.01,">1 nonsynonymous","I2N S45H C49G F62G G117S Q176R",6
"lib2","SARS-CoV-2","ACACTTAAAAACCAAA",1,8.44,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","Y35K N58L N92H P197S",4
"lib2","SARS-CoV-2","ACACTTAAATAAATCC",6,93.73,7.12,-3.72,0.14,1.99,1.1,0,"1 nonsynonymous","C150K",1
"lib2","SARS-CoV-2","ACACTTAAATATAATC",3,2.93,NA,NA,NA,NA,NA,NA,"stop","S43P P54H F62C P96* N107P T148P V153C",7
"lib2","SARS-CoV-2","ACACTTAACTTTTAAT",5,98.52,6.02,-4.82,1.01,1.5,1.21,0.01,">1 nonsynonymous","K94I V153D E186D",3
"lib2","SARS-CoV-2","ACACTTAAGCCCCTTT",3,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43I Y91F Y119A L183A",4
"lib2","SARS-CoV-2","ACACTTAATACCAAGT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","L5* P96Q P149T",3
"lib2","SARS-CoV-2","ACACTTACCGAGGTGA",3,12.64,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I2L K56F A105D",3
"lib2","SARS-CoV-2","ACACTTACGAACAATC",3,24.38,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","L5R L38T S113L T140N",4
"lib2","SARS-CoV-2","ACACTTACGGCGCAAT",8,93.61,10.85,0.01,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTTACTAAAATTA",1,24.15,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F8Y A14C D112S D137I P169W G174R",6
"lib2","SARS-CoV-2","ACACTTACTTATGAGG",5,92.35,9.8,-1.04,0.06,2.07,1.06,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","ACACTTATATAACTGA",2,8.33,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","D75I Q84D",2
"lib2","SARS-CoV-2","ACACTTATCAGACCTA",5,6.6,6,-4.84,2,3,1.24,0.03,">1 nonsynonymous","I104Q Y159A F167R P177S",4
"lib2","SARS-CoV-2","ACACTTATGCTCGGCC",2,8.34,8.08,-2.75,0.19,2.14,1.16,0.01,">1 nonsynonymous","T3A L5M N13T V37L Y119K G152R S200V",7
"lib2","SARS-CoV-2","ACACTTCAAATGAAAC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","N64T L131*",2
"lib2","SARS-CoV-2","ACACTTCACTGGATAC",3,25.46,6.45,-4.38,0.48,1.5,1.24,0.02,">1 nonsynonymous","D34T A81H S139G",3
"lib2","SARS-CoV-2","ACACTTCATGCTACCC",1,33.35,10.17,-0.67,0.06,2.96,1,0,"1 nonsynonymous","L57N",1
"lib2","SARS-CoV-2","ACACTTCCGGTAATCT",1,1.23,NA,NA,NA,NA,NA,NA,"stop","D68V P96* C195V",3
"lib2","SARS-CoV-2","ACACTTCCTGAATAGT",5,63.29,10.82,-0.02,0.07,2.92,1.07,0,">1 nonsynonymous","L5M S36M",2
"lib2","SARS-CoV-2","ACACTTCGTATTAATT",3,45.91,8.41,-2.42,0.15,3,1.08,0.01,"1 nonsynonymous","F126N",1
"lib2","SARS-CoV-2","ACACTTCTCAATCATT",3,89.9,8.14,-2.7,0.16,1.71,1.12,0.01,">1 nonsynonymous","S113R N120T",2
"lib2","SARS-CoV-2","ACACTTGAACCAAGCT",4,42.09,10.79,-0.04,0.04,2.97,1.05,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","ACACTTGAATGAAAAA",12,19.46,7.61,-3.23,0.31,1.5,1.04,0.04,">1 nonsynonymous","T3I W106G S129R G174L",4
"lib2","SARS-CoV-2","ACACTTGGATGGACCT",1,1.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134G",1
"lib2","SARS-CoV-2","ACACTTGGGCATTAGG",15,221.92,10.85,0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTTGGGCGTCAAA",3,0.99,NA,NA,NA,NA,NA,NA,"stop","G9V K48* T140S",3
"lib2","SARS-CoV-2","ACACTTGTACGGTCAC",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y L122K",2
"lib2","SARS-CoV-2","ACACTTTAATCCCCTG",1,3.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","ACACTTTCATGTAGAA",3,39.36,10.89,0.05,0.07,2.95,1.05,0,"1 nonsynonymous","S200C",1
"lib2","SARS-CoV-2","ACACTTTGACACCTAT",3,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R N130D",2
"lib2","SARS-CoV-2","ACACTTTGACGCGGAT",11,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y V65M W106R I142A",4
"lib2","SARS-CoV-2","ACACTTTGTCGCGATA",2,9.21,10.74,-0.1,0.06,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACACTTTTGACACCCA",3,0,NA,NA,NA,NA,NA,NA,"stop","E10* S43R P54* S129C F156M L183F",6
"lib2","SARS-CoV-2","ACAGAAAAAAACTTAT",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M A33Y S41A C49S D112Q",5
"lib2","SARS-CoV-2","ACAGAAAAAATTGATG",7,90.91,9.18,-1.65,0.08,1.66,1.1,0,">1 nonsynonymous","S36H Y91G N130M",3
"lib2","SARS-CoV-2","ACAGAAAAACAGCAAG",4,9.55,8.08,-2.76,0.39,1.65,1.31,0.06,">1 nonsynonymous","I28E K87P N151T",3
"lib2","SARS-CoV-2","ACAGAAAACAGATGAA",7,18.63,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C49G P96F T100L W106S G174V T201N",6
"lib2","SARS-CoV-2","ACAGAAAACAGTCTTT",8,96.81,6.01,-4.83,0.85,1.5,1.13,0.01,">1 nonsynonymous","F62S C150S",2
"lib2","SARS-CoV-2","ACAGAAAACTGGTGCT",3,28.58,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V37L G51Q I80K I142K",4
"lib2","SARS-CoV-2","ACAGAAAAGAACCTCC",5,103.85,10.78,-0.06,0.03,2.99,1.03,0,">1 nonsynonymous","T3H S53L",2
"lib2","SARS-CoV-2","ACAGAAAAGAATAAAT",3,80.65,10.66,-0.18,0.04,2.89,1.14,0,">1 nonsynonymous","T63E D98E",2
"lib2","SARS-CoV-2","ACAGAAAAGACCGCTA",2,124.25,10.54,-0.29,0.02,2.96,1.05,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","ACAGAAAAGAGATTGA",7,48.72,7.99,-2.85,0.25,1.5,1,0.02,">1 nonsynonymous","S36N A105L R136K",3
"lib2","SARS-CoV-2","ACAGAAAAGCTACACG",2,97.93,9.64,-1.19,0.06,2.61,1.04,0,">1 nonsynonymous","N107V L122S",2
"lib2","SARS-CoV-2","ACAGAAAATCAGCGGA",3,91.72,10,-0.84,0.06,2.36,1.08,0,">1 nonsynonymous","P7L I28V N64C",3
"lib2","SARS-CoV-2","ACAGAAAATTCTAATA",1,8.17,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6R T55P D98A K132V",4
"lib2","SARS-CoV-2","ACAGAAACAACCAGAC",1,63.04,10.55,-0.28,0.05,2.87,1.12,0,">1 nonsynonymous","D97Y N130K Q144R",3
"lib2","SARS-CoV-2","ACAGAAACCACATTTA",5,40.19,6,-4.84,1.72,3,1.22,0.01,">1 nonsynonymous","C6N R25V C61S",3
"lib2","SARS-CoV-2","ACAGAAACCAGTGCTT",5,239.03,9.11,-1.72,0.03,2.94,1.09,0,">1 nonsynonymous","C61K G117V P197Q S200P",4
"lib2","SARS-CoV-2","ACAGAAACTAAAAGAG",3,65.67,9.93,-0.91,0.11,2.35,1.1,0.01,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","ACAGAAAGAACATAGT",1,44.08,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","F70N N120K K128F N157F S184C",5
"lib2","SARS-CoV-2","ACAGAAAGCGGATCCC",6,40.95,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L38M A81Q I88S G174E S184D",5
"lib2","SARS-CoV-2","ACAGAAAGGAAGGAGT",4,61.23,10.87,0.04,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGAAAGTCCACAAA",4,80.3,10.27,-0.57,0.04,2.91,1.02,0,"1 nonsynonymous","V11T",1
"lib2","SARS-CoV-2","ACAGAAAGTCCTAGTC",14,136.06,6,-4.84,2,3,1.17,0,">1 nonsynonymous","R27S C49V L60S I80W A105F",5
"lib2","SARS-CoV-2","ACAGAAATATAACGAC",8,70.77,9.33,-1.5,0.04,2.88,1.13,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","ACAGAAATATGCGTGA",1,20.77,10.89,0.06,0.1,2.98,1.02,0,">1 nonsynonymous","V37S T148S",2
"lib2","SARS-CoV-2","ACAGAAATGCCCATGG",8,85.68,9.48,-1.35,0.1,2.25,1.05,0,">1 nonsynonymous","K94V S147R Q163R",3
"lib2","SARS-CoV-2","ACAGAAATTAACATAA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","L5* Y35R D98F G174N",4
"lib2","SARS-CoV-2","ACAGAAATTACACGAC",8,51.95,8.69,-2.15,0.21,1.5,1.07,0.01,">1 nonsynonymous","R25A C61V",2
"lib2","SARS-CoV-2","ACAGAACAAGGGATGC",7,1.35,NA,NA,NA,NA,NA,NA,"stop","Q84V N92V F99* C150* F167I",5
"lib2","SARS-CoV-2","ACAGAACAAGTTAGCG",11,90.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N T63Y Y91I A105Y",4
"lib2","SARS-CoV-2","ACAGAACACCTTGTTG",13,5.99,NA,NA,NA,NA,NA,NA,"stop","T85V D97S K128* G155C G166L Q176R",6
"lib2","SARS-CoV-2","ACAGAACCCTATGCTT",2,22.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K26P F44V Q84L A89K L95Q",5
"lib2","SARS-CoV-2","ACAGAACGACACTCGG",1,5.22,7.99,-2.85,0.33,3,1.13,0.02,">1 nonsynonymous","Y143V T170E",2
"lib2","SARS-CoV-2","ACAGAACGCAATTAAG",1,19.86,6,-4.84,2,3,1.16,0.03,">1 nonsynonymous","L57S Y91S D97P F156S",4
"lib2","SARS-CoV-2","ACAGAACGCACCTCAA",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105N P149M",2
"lib2","SARS-CoV-2","ACAGAACGCCTAGCCG",11,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y L122V",2
"lib2","SARS-CoV-2","ACAGAACTAGGATAAC",3,50.48,8.5,-2.33,0.1,1.69,1.1,0,">1 nonsynonymous","D137W V173K",2
"lib2","SARS-CoV-2","ACAGAACTATAAGGTT",5,0.52,NA,NA,NA,NA,NA,NA,"stop","V65W G86K D112* L125R L131P",5
"lib2","SARS-CoV-2","ACAGAAGAAGACAAAG",6,0,NA,NA,NA,NA,NA,NA,"stop","N13R Y35* N40K L60E L95F G152Q",6
"lib2","SARS-CoV-2","ACAGAAGAATCAGATT",2,45.8,10.73,-0.1,0.04,2.97,1.06,0,">1 nonsynonymous","T3P P54S",2
"lib2","SARS-CoV-2","ACAGAAGAGATTCTAA",2,33.97,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Q79F G86R K128W V173N G196R",5
"lib2","SARS-CoV-2","ACAGAAGAGTCTAACC",1,1.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","ACAGAAGATACATCAA",3,62.21,7.6,-3.24,0.21,1.6,1.12,0.02,">1 nonsynonymous","F8I S113L",2
"lib2","SARS-CoV-2","ACAGAAGGGACAGCTA",4,20.64,6.44,-4.39,0.18,2.93,1.1,0,">1 nonsynonymous","I2S K87M Y165E",3
"lib2","SARS-CoV-2","ACAGAAGGTAATAAAC",2,7.12,8.41,-2.42,0.32,1.63,1,0.02,">1 nonsynonymous","Y91H K128W N151S S200C",4
"lib2","SARS-CoV-2","ACAGAAGTCAACGGCC",14,60.6,8.36,-2.48,0.23,1.5,1.02,0.03,">1 nonsynonymous","F12M V180A",2
"lib2","SARS-CoV-2","ACAGAAGTTACCTATT",3,9.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S45W K94N T170M",3
"lib2","SARS-CoV-2","ACAGAATACAACACAC",6,15.01,10.78,-0.06,0.12,3,1.02,0.01,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","ACAGAATACTGTGTTT",3,84.59,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6S C102M Y119L Q176S",4
"lib2","SARS-CoV-2","ACAGAATAGTGCTCTG",3,22.56,7.12,-3.71,0.25,1.71,1.05,0.01,">1 nonsynonymous","C61W C150L G155V",3
"lib2","SARS-CoV-2","ACAGAATATATTGTGG",7,30.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V65Y D90M D98L Y119S P149R N157V",6
"lib2","SARS-CoV-2","ACAGAATATCCTACGT",6,11.14,9.34,-1.5,0.27,1.58,1.12,0.03,">1 nonsynonymous","N13S S19K A33M",3
"lib2","SARS-CoV-2","ACAGAATATGAAACTT",8,116.49,10.86,0.03,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGAATATTGTTGAA",6,20.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15Y N40I Y91C",3
"lib2","SARS-CoV-2","ACAGAATCAAAGTTAT",20,108.12,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N1S S19T K87L R124M",4
"lib2","SARS-CoV-2","ACAGAATCGTATAAAA",10,141.29,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11F R78P K94S T100R I142W",5
"lib2","SARS-CoV-2","ACAGAATCTGCCCCGG",3,32.25,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A18R R124L N151S G172A",4
"lib2","SARS-CoV-2","ACAGAATCTTCGCTAG",7,113.75,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F8K V20D N130M Q176G",4
"lib2","SARS-CoV-2","ACAGAATGAAACTCGA",3,22.02,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","N30I A42P Y91R V103I G152P S164F",6
"lib2","SARS-CoV-2","ACAGAATGAACCAGTA",2,79.59,10.73,-0.1,0.04,2.95,1.07,0,"1 nonsynonymous","N130D",1
"lib2","SARS-CoV-2","ACAGAATGAGAAAACT",8,6.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9P T15L V52L A105H T170P L183R",6
"lib2","SARS-CoV-2","ACAGAATGTAACTAAA",3,38.93,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","G51C T85F S113P A145W G152L",5
"lib2","SARS-CoV-2","ACAGAATGTTAGCGAC",4,5.54,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G51V R78C N107F R127L",4
"lib2","SARS-CoV-2","ACAGAATTAAGTTACG",2,5.38,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","N13F G51W W106C N151L F167V",5
"lib2","SARS-CoV-2","ACAGAATTCTCGAAAG",2,26.19,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R27C Y119A R124L P149T",4
"lib2","SARS-CoV-2","ACAGACAAAAGAATAT",2,52.6,9.83,-1.01,0.08,2.78,1.08,0,">1 nonsynonymous","L60K K87M E141W",3
"lib2","SARS-CoV-2","ACAGACAACAACCGAT",4,48.06,10.57,-0.27,0.05,2.85,1.02,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","ACAGACAACAATTAAA",1,23.15,9.02,-1.82,0.2,2.66,1.18,0.01,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","ACAGACAACATACCAT",8,48.52,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L60V V103C N118R",3
"lib2","SARS-CoV-2","ACAGACAAGGTACCGC",12,1.26,NA,NA,NA,NA,NA,NA,"stop","G9F S36* P54C C61V T85S Y119S Q163V",7
"lib2","SARS-CoV-2","ACAGACACATGAAAAG",1,30.99,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G101V S139V G174Y",3
"lib2","SARS-CoV-2","ACAGACAGAACGGGAA",4,7.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12D F70K Y93R T100P",4
"lib2","SARS-CoV-2","ACAGACATATATGCTA",6,14.4,7.09,-3.74,0.23,1.5,1.09,0.01,"1 nonsynonymous","V103Y",1
"lib2","SARS-CoV-2","ACAGACCAAACGGGTA",1,6.7,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G86D L122V H189R",3
"lib2","SARS-CoV-2","ACAGACCACAGCCTAA",5,32.77,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F8S Y143T",2
"lib2","SARS-CoV-2","ACAGACCAGCTAACGG",2,47.04,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","Y50C Y91N G101N A105N",4
"lib2","SARS-CoV-2","ACAGACCTAAAAGAAA",1,31.25,6.1,-4.74,0.61,1.5,1.14,0.01,">1 nonsynonymous","N24R F47S R73P T148D",4
"lib2","SARS-CoV-2","ACAGACCTACTACATG",10,140.21,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","V115C E141V Y159S",3
"lib2","SARS-CoV-2","ACAGACCTACTGATCC",5,76.41,8.01,-2.83,0.2,1.5,1.05,0.02,">1 nonsynonymous","D34G S43G T63F W106M",4
"lib2","SARS-CoV-2","ACAGACGATTAGACCA",1,126.25,10.63,-0.21,0.04,2.92,1.06,0,">1 nonsynonymous","K114S E154A",2
"lib2","SARS-CoV-2","ACAGACGATTCGATCT",2,75.48,10.59,-0.25,0.04,3,1.01,0,">1 nonsynonymous","Y66T R78E K132M",3
"lib2","SARS-CoV-2","ACAGACGCAACTAAAG",4,31.18,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F17T I28E L57W G146V",4
"lib2","SARS-CoV-2","ACAGACGTTCTCGAAC",9,100.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6V R27Q C158D",3
"lib2","SARS-CoV-2","ACAGACTAACACTCAA",8,86.72,6,-4.84,1.35,1.5,1.14,0.01,">1 nonsynonymous","A22R C150L",2
"lib2","SARS-CoV-2","ACAGACTCGAGCCCGA",1,10.86,6.11,-4.72,0.5,3,1.15,0.01,">1 nonsynonymous","F17H N58R D98N N107I Y165E",5
"lib2","SARS-CoV-2","ACAGACTTCTCTAGAA",10,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D34T C61S D112M",4
"lib2","SARS-CoV-2","ACAGACTTGTGTTTGC",6,167.27,10.76,-0.07,0.03,2.89,1.12,0,">1 nonsynonymous","L5I T46L T201P",3
"lib2","SARS-CoV-2","ACAGAGAAATCAATGA",2,83.02,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28E G51F",2
"lib2","SARS-CoV-2","ACAGAGAAGCGACACA",16,50.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14D Y50V R136N N157S",4
"lib2","SARS-CoV-2","ACAGAGAAGTATCTAT",6,79.69,10.74,-0.1,0.08,2.77,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGAGAAGTCTTTCA",8,18.9,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2C E10S Y35A A105T P149L F167R",6
"lib2","SARS-CoV-2","ACAGAGACACAGCAAA",1,10.49,10.67,-0.16,0.06,3,1.02,0,">1 nonsynonymous","R27V F44V",2
"lib2","SARS-CoV-2","ACAGAGACGAAACTGT",2,6.42,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","ACAGAGACGAATAAAA",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R W106I Y121N G155C C158E",5
"lib2","SARS-CoV-2","ACAGAGATAAAATTAT",2,40.08,10.74,-0.1,0.08,2.8,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGAGATACAACGCG",7,130.46,8.63,-2.21,0.07,2.83,1.14,0,">1 nonsynonymous","S139N N157H",2
"lib2","SARS-CoV-2","ACAGAGATATAATACC",1,3.46,NA,NA,NA,NA,NA,NA,"stop","K26* Y165H",2
"lib2","SARS-CoV-2","ACAGAGCAAGACAACA",6,72.18,10.3,-0.53,0.05,2.83,1.01,0,">1 nonsynonymous","G83Y R136L",2
"lib2","SARS-CoV-2","ACAGAGCAAGGTTCTG",1,25.25,10.52,-0.31,0.07,2.94,1.07,0,">1 nonsynonymous","Y35A K198S",2
"lib2","SARS-CoV-2","ACAGAGGACAGACCCA",8,55.6,10.52,-0.32,0.05,2.93,1.07,0,"1 nonsynonymous","L57W",1
"lib2","SARS-CoV-2","ACAGAGGACGGAATGG",2,31.62,10.32,-0.51,0.11,2.73,1.02,0.01,">1 nonsynonymous","C31V V37L S129T",3
"lib2","SARS-CoV-2","ACAGAGGCAGGCAAAT",1,1.38,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACAGAGGCGAGTCGAG",10,110.62,8.47,-2.36,0.13,1.69,1.13,0.01,">1 nonsynonymous","T100S N107V",2
"lib2","SARS-CoV-2","ACAGAGGTAAAAAGAT",1,26.37,7.39,-3.45,0.24,1.5,1.09,0.02,">1 nonsynonymous","G86D N151T",2
"lib2","SARS-CoV-2","ACAGAGGTTAACCGGA",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A G83C F99N P133L",4
"lib2","SARS-CoV-2","ACAGAGTCAACACGAG",10,80.75,10.58,-0.25,0.04,3,1,0,">1 nonsynonymous","S45T C61L",2
"lib2","SARS-CoV-2","ACAGAGTCAGCCCAAT",8,22.63,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","Y21L P96S V115L",3
"lib2","SARS-CoV-2","ACAGAGTGTGCCATAT",5,83.98,10.63,-0.21,0.13,2.63,1.1,0.01,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","ACAGAGTTAGTCCTCC",9,135.53,10.76,-0.07,0.03,2.92,1.09,0,">1 nonsynonymous","A81E Y123K",2
"lib2","SARS-CoV-2","ACAGAGTTAGTTGCGC",5,52.02,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y35K N107I",2
"lib2","SARS-CoV-2","ACAGAGTTTTATAACT",7,9.94,6.09,-4.75,2,3,1.23,0.01,">1 nonsynonymous","A42M N120K V173F V182Y",4
"lib2","SARS-CoV-2","ACAGATAAACTAACAA",6,75.36,10.31,-0.53,0.05,2.86,1.06,0,">1 nonsynonymous","V173S P197S",2
"lib2","SARS-CoV-2","ACAGATAACACTAGAA",13,263.97,10.73,-0.11,0.03,2.94,1.07,0,">1 nonsynonymous","E10D R136Q",2
"lib2","SARS-CoV-2","ACAGATAAGACCAGAA",12,138.4,10.81,-0.02,0.05,2.87,1.13,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","ACAGATAAGCCGAGGT",9,139.54,9.44,-1.39,0.06,2.52,1.03,0,">1 nonsynonymous","G83I Y121L",2
"lib2","SARS-CoV-2","ACAGATAAGCTAAATT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","S53* A67S V115I",3
"lib2","SARS-CoV-2","ACAGATAATTAAGAAA",3,24.04,9.24,-1.59,0.23,1.96,1.11,0.02,">1 nonsynonymous","L57R T63Q K87P K94R",4
"lib2","SARS-CoV-2","ACAGATACAAGAAAAG",3,23.54,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36N F126Q L131R C158L L187Q A192M",6
"lib2","SARS-CoV-2","ACAGATACTCTCGAAG",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70T R78G D98A",3
"lib2","SARS-CoV-2","ACAGATATAATTACAA",2,70.85,6.21,-4.63,0.46,1.5,1.11,0.01,">1 nonsynonymous","C61T D112G",2
"lib2","SARS-CoV-2","ACAGATATATAGCTAA",2,64.98,10.61,-0.23,0.05,2.93,1.03,0,">1 nonsynonymous","G9L T55S",2
"lib2","SARS-CoV-2","ACAGATATATCCAAAT",3,32.81,8.05,-2.78,0.31,1.5,1.07,0.04,">1 nonsynonymous","W23K T85H",2
"lib2","SARS-CoV-2","ACAGATATTACGAACG",4,9.58,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14F V180E P191F",3
"lib2","SARS-CoV-2","ACAGATATTCATCTTA",1,14.7,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C158T F167D G196R",3
"lib2","SARS-CoV-2","ACAGATCAACGTATGT",3,8.88,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G74N P82N Y121A",3
"lib2","SARS-CoV-2","ACAGATCACCCTCTTG",6,87.16,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44A G83T S113D R124V R136V Q168T",6
"lib2","SARS-CoV-2","ACAGATCACTCTCTGA",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18I T63W E186H",3
"lib2","SARS-CoV-2","ACAGATCCGTGCAAGA",3,10.02,8.91,-1.93,0.2,1.62,1.11,0.02,">1 nonsynonymous","I28Y K94E",2
"lib2","SARS-CoV-2","ACAGATCTAAATGAAT",12,59.23,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","N4G W23A S43V A81C N151K P191I",6
"lib2","SARS-CoV-2","ACAGATGAGTAAAAAA",2,18.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45A P161Y",2
"lib2","SARS-CoV-2","ACAGATGATCTTTAAA",12,92.88,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V37Y G83S V103F P133F P169M",5
"lib2","SARS-CoV-2","ACAGATGCCCCTAAAT",15,4.17,NA,NA,NA,NA,NA,NA,"stop","A33* C102A L122P T140N T148L R179N",6
"lib2","SARS-CoV-2","ACAGATGGCAATAATA",2,49.74,6.01,-4.83,1.11,1.5,1.17,0.04,">1 nonsynonymous","I28R S108T G152Y F156N T201S",5
"lib2","SARS-CoV-2","ACAGATGGCGCATTGA",6,46.06,9.89,-0.95,0.07,2.02,1.02,0,">1 nonsynonymous","G83F W106L",2
"lib2","SARS-CoV-2","ACAGATGTAGCCAACG",3,22.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I28T K48D C61P L95R",4
"lib2","SARS-CoV-2","ACAGATGTATTTGTTG",13,73.37,10.83,0,0.02,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGATTAAGACTCCT",5,82.71,10.83,0,0.05,2.95,1.07,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","ACAGATTAGACGGCAT",4,95.45,8.21,-2.62,0.13,2.58,1.1,0.01,">1 nonsynonymous","G146P T201I",2
"lib2","SARS-CoV-2","ACAGATTAGAGCTGAT",19,4.87,NA,NA,NA,NA,NA,NA,"stop","V11R D68* L95V L122M G146N Y178V",6
"lib2","SARS-CoV-2","ACAGATTCAACTCATT",2,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ACAGATTCGATCATGA",5,25.96,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C49Y F62S P149M",3
"lib2","SARS-CoV-2","ACAGATTGAAGCTGAA",6,12.57,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T55S C61A F70N P169C",4
"lib2","SARS-CoV-2","ACAGATTGATCATAGG",2,0.26,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACAGATTGCGGGTTTT",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y P82N R127S K132S I142Q C150F V182F",7
"lib2","SARS-CoV-2","ACAGATTGTTCATAAC",3,0.83,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","ACAGATTTACGAATCG",2,67.84,10.6,-0.23,0.03,2.93,1.05,0,">1 nonsynonymous","I104T L122Q S129K T140S S147M",5
"lib2","SARS-CoV-2","ACAGATTTACGAATTT",6,129.54,10.11,-0.73,0.04,2.91,1.05,0,">1 nonsynonymous","L122Q P177S K199S",3
"lib2","SARS-CoV-2","ACAGATTTCAAGATAT",26,357.54,10.21,-0.63,0.03,2.76,1.09,0,">1 nonsynonymous","A14I P149H",2
"lib2","SARS-CoV-2","ACAGATTTTTGCTCAG",9,61.72,8.77,-2.07,0.13,1.5,1.04,0.01,">1 nonsynonymous","D59F L95T",2
"lib2","SARS-CoV-2","ACAGCAAAAAGGTGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87M I138R N157E",3
"lib2","SARS-CoV-2","ACAGCAAAAGGCAGAC",6,66.47,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Y21K N40H K94S",3
"lib2","SARS-CoV-2","ACAGCAAACAACCCAC",4,64.34,9.38,-1.46,0.04,2.92,1.04,0,">1 nonsynonymous","T3M K56R L125P N151Y",4
"lib2","SARS-CoV-2","ACAGCAACAGTTAGCA",3,52.99,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","A14C L131E",2
"lib2","SARS-CoV-2","ACAGCAAGAATTCTAA",8,0.27,NA,NA,NA,NA,NA,NA,"stop","N92* Y143S",2
"lib2","SARS-CoV-2","ACAGCAATACTACCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39I D75T G174S",3
"lib2","SARS-CoV-2","ACAGCAATACTTGTAG",5,15.16,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F99S S129L T148S",3
"lib2","SARS-CoV-2","ACAGCAATCAGGACTG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","N1V F8C R127* T170A Y175T",5
"lib2","SARS-CoV-2","ACAGCAATCCTAAAGT",4,36.92,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","S53F G83R S113C N118F",4
"lib2","SARS-CoV-2","ACAGCAATCTCGAACA",5,55.56,10.51,-0.32,0.05,2.88,1.11,0,">1 nonsynonymous","N58Q D90C L122Y",3
"lib2","SARS-CoV-2","ACAGCAATGTTAGAGA",2,16.39,9.8,-1.03,0.1,2.79,1.12,0,">1 nonsynonymous","C61E A89S P149S G155D P197I",5
"lib2","SARS-CoV-2","ACAGCACCCATTGTGT",4,72.77,9.99,-0.85,0.06,2.77,1.08,0,">1 nonsynonymous","L5C D90Y",2
"lib2","SARS-CoV-2","ACAGCACCCTTTCTAG",2,31.6,10.2,-0.64,0.09,2.9,1.01,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","ACAGCACCTGCACCAA",2,53.08,10.31,-0.52,0.05,2.98,1,0,"1 nonsynonymous","N171C",1
"lib2","SARS-CoV-2","ACAGCACGAATAGGGT",14,8.49,NA,NA,NA,NA,NA,NA,"stop","F8A T148*",2
"lib2","SARS-CoV-2","ACAGCACTACTTACTA",5,70.28,10.57,-0.27,0.05,2.83,1.14,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","ACAGCACTGATAAAGG",2,22.95,6.86,-3.97,0.19,1.5,1.05,0.01,">1 nonsynonymous","A18R R25K L60G",3
"lib2","SARS-CoV-2","ACAGCACTGTATAATA",8,83.38,10.7,-0.13,0.04,2.89,1.07,0,">1 nonsynonymous","T3V T63G Q163F",3
"lib2","SARS-CoV-2","ACAGCAGAAAAGTGCA",4,69.91,9.56,-1.28,0.07,2.84,1.13,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","ACAGCAGAACCTCTAA",7,45.57,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","T55M F99N N110I",3
"lib2","SARS-CoV-2","ACAGCAGAGGAAGACT",9,142.94,10.83,-0.01,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCAGCCCAATCTA",9,53.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37E S45H L60R A81F K94M",5
"lib2","SARS-CoV-2","ACAGCAGCCTGATGAC",5,72.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T55S N64L G83K V103I T170M Y175E",6
"lib2","SARS-CoV-2","ACAGCAGCGGTAAGAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35L V65* G83Y",3
"lib2","SARS-CoV-2","ACAGCAGGAAAAAAGT",3,99.54,10.44,-0.4,0.05,2.92,1.05,0,">1 nonsynonymous","L60R K132C S200Y",3
"lib2","SARS-CoV-2","ACAGCAGTAAGTATGC",3,15.05,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","N4W E10N V77Q D90P S113R N120G C158W",7
"lib2","SARS-CoV-2","ACAGCAGTTCGATCTT",1,5.52,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S19E D34N S41L N107L D112C",5
"lib2","SARS-CoV-2","ACAGCATAAACCTGAT",1,106.08,10.8,-0.04,0.06,2.91,1.09,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","ACAGCATATTCTTATT",5,24.94,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","L5G Y50K L57H P82R S129L",5
"lib2","SARS-CoV-2","ACAGCATGCATTAACG",1,50.49,10.8,-0.03,0.07,2.97,1.04,0,">1 nonsynonymous","D59T Y66L H189D",3
"lib2","SARS-CoV-2","ACAGCATTAGACAGAG",3,40.09,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F99L L162V G172V",3
"lib2","SARS-CoV-2","ACAGCATTTATCGCCA",12,72.33,8.61,-2.23,0.1,1.79,1.1,0,">1 nonsynonymous","N4F T100D G166N",3
"lib2","SARS-CoV-2","ACAGCCAATTCCCACC",7,8.01,NA,NA,NA,NA,NA,NA,"stop","I2* Y91M S139Y Q176C",4
"lib2","SARS-CoV-2","ACAGCCAATTTCAGGC",1,8.66,10.19,-0.65,0.08,3,1,0,">1 nonsynonymous","T55A C61L E154D",3
"lib2","SARS-CoV-2","ACAGCCACAACCGCGC",6,52.3,6.36,-4.47,0.55,1.5,1.13,0.02,">1 nonsynonymous","T3W V11D Y119D",3
"lib2","SARS-CoV-2","ACAGCCACATATCACC",13,139.87,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A14S G83V D90Y P169E",4
"lib2","SARS-CoV-2","ACAGCCACCTGAGATA",5,68.25,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35V S41N G86W W106A R124C Q144I G166R",7
"lib2","SARS-CoV-2","ACAGCCAGCTTAGAAC",7,107.01,8.33,-2.5,0.12,1.68,1.09,0.01,">1 nonsynonymous","G9V W106C G174S",3
"lib2","SARS-CoV-2","ACAGCCAGGATAACAT",8,105.58,10.15,-0.69,0.05,2.86,1.06,0,">1 nonsynonymous","Y119R G152R Q163L",3
"lib2","SARS-CoV-2","ACAGCCATACTTCGAA",10,1.26,NA,NA,NA,NA,NA,NA,"stop","Y91N Y119* N157S",3
"lib2","SARS-CoV-2","ACAGCCATAGATAGAA",8,32.22,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","V77R G86R Y91L D98Y F126R",5
"lib2","SARS-CoV-2","ACAGCCATTAACGTCA",7,86.11,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y50S G116I Y178I",3
"lib2","SARS-CoV-2","ACAGCCATTCTACGGA",5,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N A67F D90T Y119V S129G F134P V173L",7
"lib2","SARS-CoV-2","ACAGCCATTGCAGACC",2,19.2,9.84,-1,0.16,2.05,1.03,0.01,">1 nonsynonymous","N40D F134I G152D",3
"lib2","SARS-CoV-2","ACAGCCCAAAGTAACA",4,33.42,8.94,-1.89,0.29,1.5,1,0.03,">1 nonsynonymous","W106K A145P",2
"lib2","SARS-CoV-2","ACAGCCCCGAATGCAA",9,70.22,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I2P N107Y P161V Y178P",4
"lib2","SARS-CoV-2","ACAGCCCTGCACTCAC",3,0.79,NA,NA,NA,NA,NA,NA,"stop","F47* P54C",2
"lib2","SARS-CoV-2","ACAGCCGAATTTAATG",1,21.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36V C49A D75E D98I N120I S184L",6
"lib2","SARS-CoV-2","ACAGCCGGGTCTAGCT",4,113.87,10.9,0.06,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCCGTCCTTCGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","ACAGCCTACCCAAGTT",3,0.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","ACAGCCTACGAACTTA",2,66.72,10.83,-0.01,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCCTATTAAGATA",2,17.21,8.88,-1.96,0.1,2.84,1.03,0.01,">1 nonsynonymous","T3A G83Y K87L G117A F126L Q168S",6
"lib2","SARS-CoV-2","ACAGCCTTTACAAATC",4,0,NA,NA,NA,NA,NA,NA,"stop","T3V N40H F47L D90* N107G G117R Y123S E141L P149C Q168F G174*",11
"lib2","SARS-CoV-2","ACAGCCTTTCTTAAAC",9,43.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35W V77E L95P",3
"lib2","SARS-CoV-2","ACAGCCTTTTCAGGGT",2,42.81,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","I72R D97R Y119H K198A",4
"lib2","SARS-CoV-2","ACAGCGACAACCCAAC",10,0.25,NA,NA,NA,NA,NA,NA,"stop","W23* F44V",2
"lib2","SARS-CoV-2","ACAGCGAGACTACGAT",2,8.56,10.95,0.11,0.11,3,1,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","ACAGCGATGGTAAAAA",4,64.49,10.42,-0.42,0.03,2.97,1,0,">1 nonsynonymous","S43M L60S G116T",3
"lib2","SARS-CoV-2","ACAGCGCCATCTACGG",10,137.73,10.79,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","ACAGCGCTGAAATTCC",3,109.7,6,-4.84,1.05,1.5,1.11,0.01,">1 nonsynonymous","K26H Q84V L95Y",3
"lib2","SARS-CoV-2","ACAGCGGAAGTCCTAT",6,51.68,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N30T Y50T F160V",3
"lib2","SARS-CoV-2","ACAGCGGACGTGGGCC",9,2.62,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","ACAGCGGCTGACCCAA",1,133.24,10.32,-0.52,0.04,2.9,1.03,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","ACAGCGGTATGGGTTA",6,90.01,10.19,-0.65,0.05,2.72,1.01,0,">1 nonsynonymous","L5V D34V S41A",3
"lib2","SARS-CoV-2","ACAGCGGTGCCAGTCC",1,16.82,7.1,-3.73,0.35,1.5,1.07,0.02,">1 nonsynonymous","A33S D90C W106K",3
"lib2","SARS-CoV-2","ACAGCGTACCTTAAAT",2,27.55,10.86,0.02,0.14,2.85,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCGTTAATAACTT",2,27.35,10.85,0.01,0.06,2.99,1.04,0,"1 nonsynonymous","P197R",1
"lib2","SARS-CoV-2","ACAGCGTTGACTATCT",9,82.16,10.49,-0.35,0.04,2.89,1.09,0,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","ACAGCGTTTAATTACA",3,30.35,10.13,-0.7,0.07,2.68,1.13,0,">1 nonsynonymous","E10A A33K",2
"lib2","SARS-CoV-2","ACAGCGTTTCCCAAAA",11,96.66,6,-4.84,0.88,1.5,1.12,0.01,">1 nonsynonymous","N1Y A22L L38Q Y119V",4
"lib2","SARS-CoV-2","ACAGCTAAACACCAGC",1,13.74,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","T46A R179P",2
"lib2","SARS-CoV-2","ACAGCTACCTATTGCG",6,8.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P7I R27I L95I S113F L122E",5
"lib2","SARS-CoV-2","ACAGCTACGATTCATA",7,56.36,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A14Y N64S P96Q Y165Q",4
"lib2","SARS-CoV-2","ACAGCTATAAACGTGT",1,38.29,10.91,0.07,0.06,2.84,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCTATAGGCCAAG",5,14.21,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D59I I72D P149S",3
"lib2","SARS-CoV-2","ACAGCTATCAGTTACT",7,61.7,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V37C K56R P161Y",3
"lib2","SARS-CoV-2","ACAGCTCAACAATACG",1,7.91,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F12K F99Y",2
"lib2","SARS-CoV-2","ACAGCTCACAACAACT",4,29.38,6,-4.84,0.61,3,1.09,0,">1 nonsynonymous","W23S G146T F156K",3
"lib2","SARS-CoV-2","ACAGCTCCGCTACTTG",1,18.6,10.88,0.05,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGCTGACACCCTGA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L W106V",2
"lib2","SARS-CoV-2","ACAGCTGACTACATCA",4,22.52,10.92,0.09,0.07,2.91,1.09,0,"1 nonsynonymous","Q163G",1
"lib2","SARS-CoV-2","ACAGCTGAGATCCACA",1,7.58,10.71,-0.13,0.15,2.95,1.13,0.01,">1 nonsynonymous","T46I I142V",2
"lib2","SARS-CoV-2","ACAGCTGCAATTAAAT",2,17.43,10.73,-0.11,0.06,3,1.02,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","ACAGCTGCTCTATTGC",4,15.01,8.49,-2.34,0.2,1.5,1.03,0.02,">1 nonsynonymous","A105C Q144I",2
"lib2","SARS-CoV-2","ACAGCTGGAAACTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R T85* V103S G155C",4
"lib2","SARS-CoV-2","ACAGCTGTTTTTAAAA",6,53.91,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","Y93H",1
"lib2","SARS-CoV-2","ACAGCTTATTAGCCAA",7,84.38,6,-4.84,1.25,1.5,1.2,0.01,">1 nonsynonymous","C6D S19V C61I D97L R136H T170F",6
"lib2","SARS-CoV-2","ACAGCTTCCACCCAAA",4,51.06,9.06,-1.77,0.25,1.5,1,0.03,">1 nonsynonymous","N40S Y66A A81T",3
"lib2","SARS-CoV-2","ACAGGAAAACGTTTAA",4,41.47,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F17P C49P",2
"lib2","SARS-CoV-2","ACAGGAAAGCCAACAA",10,86.99,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A105L L122C S129V F134L F156V",5
"lib2","SARS-CoV-2","ACAGGAAATCCGACAT",2,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A V11K W106E N151G",4
"lib2","SARS-CoV-2","ACAGGAAATCGCACCA",3,197.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N92R S129C E141C P161N P177S L183V",6
"lib2","SARS-CoV-2","ACAGGAACAACCTTAC",4,21.48,8.08,-2.76,0.12,1.5,1.04,0.01,">1 nonsynonymous","D137Y F160L",2
"lib2","SARS-CoV-2","ACAGGAACACAAAGGG",3,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A A105S S139I G146A",4
"lib2","SARS-CoV-2","ACAGGAATCCCAAATA",2,14.68,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I88S D137H S147V",3
"lib2","SARS-CoV-2","ACAGGAATGAAGGTAT",13,134.66,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4S L38H D90Q T140S N157I P191V C195S",7
"lib2","SARS-CoV-2","ACAGGAATGGTGAACA",4,137.87,10.75,-0.09,0.03,2.89,1.07,0,">1 nonsynonymous","N110L T148L",2
"lib2","SARS-CoV-2","ACAGGACACTTGATCA",1,88.73,7.99,-2.85,0.08,2.52,1.13,0,">1 nonsynonymous","N120I Y175S",2
"lib2","SARS-CoV-2","ACAGGACCAACTCAAA",3,35.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T15I N40P G51V V65S Y143F",5
"lib2","SARS-CoV-2","ACAGGACGAATTCTAG",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y S129M E141K G174Q K198C",5
"lib2","SARS-CoV-2","ACAGGACTGACTGTAC",7,95.95,9.35,-1.49,0.06,2.75,1.07,0,">1 nonsynonymous","F8T V37D I104F K114R L122R F156K",6
"lib2","SARS-CoV-2","ACAGGAGAATCCACGA",10,13.5,6.2,-4.64,1.27,1.5,1.29,0.03,">1 nonsynonymous","D68K F99H V173I V182S",4
"lib2","SARS-CoV-2","ACAGGAGCCCCTCCAG",6,6.3,NA,NA,NA,NA,NA,NA,"stop","V37T N107* F134K",3
"lib2","SARS-CoV-2","ACAGGAGCCGTCCACC",14,327.02,10.38,-0.45,0.04,2.84,1.02,0,">1 nonsynonymous","K56V K128W",2
"lib2","SARS-CoV-2","ACAGGAGGCCAAAAGC",1,26.77,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I72R A81S G86L K114S P149L",5
"lib2","SARS-CoV-2","ACAGGAGTAAGCAGTA",2,18.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y K48S D98I Y119M",4
"lib2","SARS-CoV-2","ACAGGAGTACAAACTG",2,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F P82A T100D W106R",4
"lib2","SARS-CoV-2","ACAGGATAACAACCTT",10,15.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I N13C P54T P96L",4
"lib2","SARS-CoV-2","ACAGGATAATGCCTAG",11,175.37,10.32,-0.52,0.04,2.91,1.08,0,">1 nonsynonymous","D90N I104M I138S",3
"lib2","SARS-CoV-2","ACAGGATACGCAGACT",1,8.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L T100S L125R S147N T170V",5
"lib2","SARS-CoV-2","ACAGGATATAAGGCGG",9,241.65,10.49,-0.35,0.04,2.95,1.04,0,">1 nonsynonymous","K56Y N58S",2
"lib2","SARS-CoV-2","ACAGGATATGGTAGTG",13,169.55,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I88P Y119F",2
"lib2","SARS-CoV-2","ACAGGATCCTAAACCA",10,57.83,9.77,-1.07,0.26,1.5,1,0.05,">1 nonsynonymous","C6F V181F",2
"lib2","SARS-CoV-2","ACAGGATCTTAACCAT",4,7.61,9.33,-1.51,0.63,1.5,1,0.05,">1 nonsynonymous","T3V A14R N58V I104L S139V",5
"lib2","SARS-CoV-2","ACAGGATGAACAGATG",1,8.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H Y165F",2
"lib2","SARS-CoV-2","ACAGGCAAACAAAATT",4,48.85,6,-4.84,2,1.5,1.24,0.04,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","ACAGGCACTAAATCTA",2,79.3,9.82,-1.01,0.04,2.92,1.07,0,">1 nonsynonymous","T170H S200H",2
"lib2","SARS-CoV-2","ACAGGCAGCCCCTTCA",4,19.52,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14G F47W G116L K128Y F134E",5
"lib2","SARS-CoV-2","ACAGGCATTACAGTGA",5,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C F70L P149L G172N F185R A190I P197L",7
"lib2","SARS-CoV-2","ACAGGCATTGGACGAA",2,9.27,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S19T L60P D97N I104N",4
"lib2","SARS-CoV-2","ACAGGCCATCTGCTGA",1,24.17,6.05,-4.79,0.77,1.5,1.12,0.01,">1 nonsynonymous","C6H V52S G101D N107R P161H L187C",6
"lib2","SARS-CoV-2","ACAGGCCCAGTGAATT",3,51.81,10.1,-0.74,0.07,2.86,1.14,0,">1 nonsynonymous","K87Q K132D",2
"lib2","SARS-CoV-2","ACAGGCCGTGCTTCGA",5,101.65,10.61,-0.23,0.03,2.9,1.1,0,">1 nonsynonymous","S41T Q168S",2
"lib2","SARS-CoV-2","ACAGGCCTAAATACCC",4,113.11,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50T D97E Y119C K128I R136Q",5
"lib2","SARS-CoV-2","ACAGGCGCAATTGTGC",1,8.1,8.64,-2.2,0.44,2.38,1.5,0.08,">1 nonsynonymous","V37T Y121F N130D",3
"lib2","SARS-CoV-2","ACAGGCGGCCCAAACA",2,38.66,10.82,-0.02,0.08,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGGCGGGTAACCAA",3,52.44,10.84,0,0.08,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGGCTAACATAGAA",5,24.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L57H G172M",2
"lib2","SARS-CoV-2","ACAGGCTATTATCAGT",1,5.3,6,-4.84,2,1.5,1.06,0.05,">1 nonsynonymous","N64K W106G Q144C Q163S P197V",5
"lib2","SARS-CoV-2","ACAGGCTGTATAAACC",2,105.96,10.81,-0.02,0.06,2.91,1.1,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","ACAGGGAAAGCGATGA",2,14.57,10.35,-0.48,0.06,2.94,1,0,">1 nonsynonymous","L5G S129L P149D",3
"lib2","SARS-CoV-2","ACAGGGAACACGCTTA",4,14.88,6,-4.84,1.38,3,1.18,0.01,">1 nonsynonymous","K26W K87E I104T E154I",4
"lib2","SARS-CoV-2","ACAGGGAACACTCGTA",8,88.35,10.46,-0.38,0.04,2.97,1.04,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","ACAGGGAATTAGACAG",12,58.01,7.89,-2.95,0.19,1.5,1.03,0.01,">1 nonsynonymous","E10R G86S T140L",3
"lib2","SARS-CoV-2","ACAGGGACATTACATG",1,22.16,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A81S Y93H S113P",3
"lib2","SARS-CoV-2","ACAGGGAGAAAAGTCT",4,64.63,10.62,-0.21,0.05,2.84,1.17,0,">1 nonsynonymous","C61Q G146A",2
"lib2","SARS-CoV-2","ACAGGGAGCGAATCTA",3,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A W23E A42Y C61I L95G F134S",6
"lib2","SARS-CoV-2","ACAGGGAGGTGCGCCA",2,14.03,8.5,-2.34,0.17,2.63,1,0.01,">1 nonsynonymous","N40T G146V",2
"lib2","SARS-CoV-2","ACAGGGATCTCTCACT",5,150.66,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R73L V77P P82D L95T",4
"lib2","SARS-CoV-2","ACAGGGATTCTTGCTG",1,11.76,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","F62K N118I Y178Q",3
"lib2","SARS-CoV-2","ACAGGGCATCCATCTG",1,19.25,10.66,-0.18,0.07,2.93,1.07,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","ACAGGGCTCACGAAAA",1,27.58,10.2,-0.64,0.04,2.94,1.07,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","ACAGGGGAAGCAAGGG",5,57.63,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F62L Y93L Y119K Y143V G155L T201S",6
"lib2","SARS-CoV-2","ACAGGGGACCCAGAAT",18,64.79,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T3V V37L D90K N107V R136M F160D",6
"lib2","SARS-CoV-2","ACAGGGTAATATGGCA",6,48.57,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35S G86Q D98S",3
"lib2","SARS-CoV-2","ACAGGGTAATATGTTT",5,129.74,10.76,-0.07,0.04,2.95,1.08,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","ACAGGGTCTAACTTAT",6,107.01,10.05,-0.79,0.03,2.67,1.08,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","ACAGGGTGAATACGAA",8,104.35,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N4F N120Q R127W F185D",4
"lib2","SARS-CoV-2","ACAGGGTTAATCAGCA",3,0.68,NA,NA,NA,NA,NA,NA,"stop","R73N E141L C150* F156S",4
"lib2","SARS-CoV-2","ACAGGGTTTGGGGGCG",4,2.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","ACAGGTAAGGAGCACG",5,38.07,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I2F V20Q N151L",3
"lib2","SARS-CoV-2","ACAGGTATCAACAAAG",16,312.85,10.85,0.01,0.05,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGGTATTATAGCGG",3,13.72,9.49,-1.34,0.12,2.82,1.28,0.01,">1 nonsynonymous","K87D D97N",2
"lib2","SARS-CoV-2","ACAGGTCACTAAAACT",6,25.53,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4M T15S K26S G86R G101N S139V",6
"lib2","SARS-CoV-2","ACAGGTCACTAAGCGG",2,76.93,10.3,-0.54,0.04,2.9,1.05,0,">1 nonsynonymous","A22N Y35Q",2
"lib2","SARS-CoV-2","ACAGGTCATCGAGGAT",1,10.06,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L95R S139Q P149D T170W",4
"lib2","SARS-CoV-2","ACAGGTCCCGCGTAAG",1,65.94,10.85,0.02,0.06,2.92,1.1,0,">1 nonsynonymous","L5M Y39V",2
"lib2","SARS-CoV-2","ACAGGTCCGTATACAA",1,32.47,10.67,-0.16,0.07,2.9,1.13,0,">1 nonsynonymous","I2H C61A",2
"lib2","SARS-CoV-2","ACAGGTCGTTTCGCCA",3,5.24,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","G51I C61L W106P I142S S184L",5
"lib2","SARS-CoV-2","ACAGGTGACTAAAACA",9,189.13,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","F12L I28A S108I Y178K",4
"lib2","SARS-CoV-2","ACAGGTGGAAGTGGTG",12,150.25,11.05,0.21,0.05,2.91,1.1,0,">1 nonsynonymous","N64T Q163M",2
"lib2","SARS-CoV-2","ACAGGTGGACCTACCC",7,69.87,7.71,-3.13,0.23,1.5,1.09,0.02,"1 nonsynonymous","R124A",1
"lib2","SARS-CoV-2","ACAGGTGGTCACAACA",7,30.7,6.2,-4.63,0.97,1.5,1.17,0.03,">1 nonsynonymous","A67S V103Y Y159Q",3
"lib2","SARS-CoV-2","ACAGGTGTAATCCACT",5,43.16,10.12,-0.72,0.07,2.36,1,0,">1 nonsynonymous","T15R N64R Y91N",3
"lib2","SARS-CoV-2","ACAGGTGTAATCGATA",2,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T P82W",2
"lib2","SARS-CoV-2","ACAGGTGTATTGCCGT",5,34,9.35,-1.49,0.31,1.5,1.11,0.06,">1 nonsynonymous","A14S S43V F62V D90Y N107S T140N",6
"lib2","SARS-CoV-2","ACAGGTTCTGTAGATT",14,55.08,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L95Y P96L Q168V",3
"lib2","SARS-CoV-2","ACAGGTTGCAGCCCAA",10,85.34,9.96,-0.87,0.08,2.17,1.06,0,">1 nonsynonymous","A14E A33L S41I F47L D97T N151G",6
"lib2","SARS-CoV-2","ACAGGTTGTTCAACCG",2,28.62,10.49,-0.35,0.05,2.84,1.15,0,">1 nonsynonymous","A33Y E141H",2
"lib2","SARS-CoV-2","ACAGGTTTATCAGGCA",3,72.08,10.53,-0.31,0.06,2.92,1,0,">1 nonsynonymous","K56R G155T",2
"lib2","SARS-CoV-2","ACAGGTTTCATCATTT",4,14.8,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C61W V103D S108I V115S L187P",5
"lib2","SARS-CoV-2","ACAGGTTTTCGAAATA",1,6.45,NA,NA,NA,NA,NA,NA,"stop","D75L A89* E141S",3
"lib2","SARS-CoV-2","ACAGTAAAAAATAATG",4,48.24,6,-4.84,0.87,1.5,1.09,0.01,">1 nonsynonymous","F47I G86Q T100P I138L Q176M T201S",6
"lib2","SARS-CoV-2","ACAGTAAAAACCCAAT",5,117.34,10.03,-0.81,0.05,2.76,1.04,0,">1 nonsynonymous","N107S P149Q",2
"lib2","SARS-CoV-2","ACAGTAAAGCCACGCT",4,75.93,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N4F A42R F47N L60V S139C",5
"lib2","SARS-CoV-2","ACAGTAAAGGGCACAG",2,22.89,9.41,-1.42,0.09,2.99,1.05,0.01,">1 nonsynonymous","C31A Y123R",2
"lib2","SARS-CoV-2","ACAGTAAATCCATCTC",5,16.78,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","K94H C102K Y143L",3
"lib2","SARS-CoV-2","ACAGTAACACTCGCAA",7,50.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95P L183F",2
"lib2","SARS-CoV-2","ACAGTAACATCCGCAA",2,16.66,6.8,-4.03,0.25,1.5,1.04,0.02,">1 nonsynonymous","I2W C150Y",2
"lib2","SARS-CoV-2","ACAGTAACCATAGCCG",2,7.77,9.85,-0.98,0.18,2.45,1.27,0.01,">1 nonsynonymous","N13L T148Q",2
"lib2","SARS-CoV-2","ACAGTAAGCACGTTGT",16,90.18,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","V77G F126Q",2
"lib2","SARS-CoV-2","ACAGTAAGGCGAATCA",4,45.69,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44P G86L P149G",3
"lib2","SARS-CoV-2","ACAGTAATCATTATAA",8,52.74,6,-4.84,2,3,1.21,0,">1 nonsynonymous","S36L Y66K C150S",3
"lib2","SARS-CoV-2","ACAGTAATTCCTGGAG",1,21.25,8.5,-2.34,0.15,2.51,1.07,0.01,">1 nonsynonymous","G9V Q144M G155P",3
"lib2","SARS-CoV-2","ACAGTAATTTAAAAAT",3,31.88,10.99,0.16,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGTACAATATGGCG",4,74.94,9.44,-1.39,0.09,1.88,1.09,0,">1 nonsynonymous","Y39F S43L I88A",3
"lib2","SARS-CoV-2","ACAGTACCACCATATA",5,70.54,9.76,-1.08,0.07,1.99,1.06,0,">1 nonsynonymous","F44V Y66R",2
"lib2","SARS-CoV-2","ACAGTACCGTACAAAG",18,4.26,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","ACAGTACGAATAAACT",3,6.99,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","T3K K87R D98L R127P Y143R",5
"lib2","SARS-CoV-2","ACAGTACGGTAGACAG",27,118.37,6.04,-4.8,1.04,1.5,1.27,0.02,">1 nonsynonymous","N13F W23S T201K",3
"lib2","SARS-CoV-2","ACAGTACTGCCAAATT",15,11.21,10.05,-0.79,0.29,2.77,1,0.04,">1 nonsynonymous","C61S P96L N130F G155S",4
"lib2","SARS-CoV-2","ACAGTAGAAGTAATTA",4,1.81,NA,NA,NA,NA,NA,NA,"stop","N1* V20S T63D Y93F",4
"lib2","SARS-CoV-2","ACAGTAGAGAAATAGG",2,35.15,10.83,-0.01,0.03,2.87,1.16,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","ACAGTAGATAAACTGA",12,124.41,10.49,-0.35,0.04,2.94,1.02,0,">1 nonsynonymous","A22E V37P K114L",3
"lib2","SARS-CoV-2","ACAGTAGCAGATCATG",2,6.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K I104M S129L D137V V153L A190P",6
"lib2","SARS-CoV-2","ACAGTAGCATACCTCT",2,50.38,9,-1.84,0.08,2.71,1.11,0,">1 nonsynonymous","L60R D75F F156G P197Q",4
"lib2","SARS-CoV-2","ACAGTAGGTCACCAAA",1,107.28,10.86,0.03,0.05,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTAGGTGGTCCCT",10,67.47,10.05,-0.79,0.07,2.76,1.03,0,">1 nonsynonymous","Y35K K48H C61V",3
"lib2","SARS-CoV-2","ACAGTATAAAAGCTGG",6,76.77,10.09,-0.74,0.07,2.57,1.08,0,">1 nonsynonymous","R27S R127A",2
"lib2","SARS-CoV-2","ACAGTATAAGCATGTG",5,46.06,8.37,-2.46,0.2,2.02,1.05,0.02,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","ACAGTATACGGAGAAT",4,26.68,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V71S I88C",2
"lib2","SARS-CoV-2","ACAGTATCAACTTGCA",2,67.9,10.81,-0.03,0.04,2.93,1.08,0,"1 nonsynonymous","A67L",1
"lib2","SARS-CoV-2","ACAGTATGAAACTCTT",3,12.12,6,-4.84,0.81,3,1.1,0.01,">1 nonsynonymous","I72S R124N",2
"lib2","SARS-CoV-2","ACAGTATGATAAACAA",2,25.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35S Y121M G152I Q176L",4
"lib2","SARS-CoV-2","ACAGTATGCGAGAACC",1,30.49,8.02,-2.82,0.27,1.5,1,0.03,">1 nonsynonymous","N13F F47A G116F",3
"lib2","SARS-CoV-2","ACAGTATGGCGAAAAC",1,25.68,10.29,-0.55,0.07,2.85,1.11,0,">1 nonsynonymous","F62L K87N",2
"lib2","SARS-CoV-2","ACAGTATTCATAACAG",7,499.75,8.66,-2.18,0.13,1.5,1.03,0.01,">1 nonsynonymous","V77S I142L",2
"lib2","SARS-CoV-2","ACAGTATTGAACTTAA",2,32.81,9.17,-1.67,0.03,3,1.05,0,">1 nonsynonymous","N40R Y119S V173N",3
"lib2","SARS-CoV-2","ACAGTATTTAACCATA",2,13.81,9.74,-1.1,0.35,1.51,1.14,0.07,">1 nonsynonymous","A14G C49L L122K T148I",4
"lib2","SARS-CoV-2","ACAGTCAAAATATTTA",16,1.25,NA,NA,NA,NA,NA,NA,"stop","F8* Y66T N120T",3
"lib2","SARS-CoV-2","ACAGTCAAACTGATAG",6,115.8,10.27,-0.56,0.04,2.83,1.06,0,">1 nonsynonymous","E10V F62L",2
"lib2","SARS-CoV-2","ACAGTCAACCACTAGG",5,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V D97L",2
"lib2","SARS-CoV-2","ACAGTCATTCTTCCAA",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P P54T",2
"lib2","SARS-CoV-2","ACAGTCCAAAGTGAAA",1,33.38,9.28,-1.56,0.09,2.83,1.17,0,"1 nonsynonymous","G117V",1
"lib2","SARS-CoV-2","ACAGTCCATAATGTAT",7,119.49,10.87,0.03,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTCCCCCAGCCAT",7,123.83,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23D I88R K114L S139V Q176P",5
"lib2","SARS-CoV-2","ACAGTCCCGACGCGAA",14,108.68,9.33,-1.51,0.07,1.96,1.07,0,">1 nonsynonymous","N107S F134A",2
"lib2","SARS-CoV-2","ACAGTCCTAATAGACC",7,275.05,9.54,-1.3,0.04,1.98,1.05,0,">1 nonsynonymous","A18R L57G",2
"lib2","SARS-CoV-2","ACAGTCGAAACTCTTA",7,2.24,NA,NA,NA,NA,NA,NA,"stop","I88S V103I P133*",3
"lib2","SARS-CoV-2","ACAGTCGGAAATAATC",9,135.12,10.81,-0.03,0.05,2.91,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTCGGGTACTAAC",3,51.25,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","L57S L131H G146K",3
"lib2","SARS-CoV-2","ACAGTCGTACCGCCTT",11,143.22,10.89,0.06,0.05,2.92,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTCGTCCACGGTA",6,29.38,8.49,-2.35,0.15,2.12,1.08,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","ACAGTCTACATAAAAA",1,2.01,NA,NA,NA,NA,NA,NA,"stop","D97V S139* G155L P169S",4
"lib2","SARS-CoV-2","ACAGTCTATGCAAGCT",13,87.1,9.17,-1.66,0.03,2.94,1.07,0,"1 nonsynonymous","G117L",1
"lib2","SARS-CoV-2","ACAGTCTCCTAGCTTG",7,233.77,10.82,-0.01,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGTCTTTCAAAAGT",8,221.91,9.69,-1.15,0.03,2.92,1.06,0,">1 nonsynonymous","K114P S200F",2
"lib2","SARS-CoV-2","ACAGTGAAACATGCTT",3,51.03,6.24,-4.6,0.51,1.5,1.09,0.01,">1 nonsynonymous","A14V L162R P169N",3
"lib2","SARS-CoV-2","ACAGTGAATGAACGAA",3,51.25,9.79,-1.05,0.06,2.01,1.03,0,">1 nonsynonymous","L5R F44T A105I",3
"lib2","SARS-CoV-2","ACAGTGAATTACTAAT",2,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L V103M Y143S",3
"lib2","SARS-CoV-2","ACAGTGACATACTAAC",1,0.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","ACAGTGAGAAGCCTCT",5,45.6,8.83,-2.01,0.07,2.69,1.04,0,">1 nonsynonymous","T63R D97G G174V",3
"lib2","SARS-CoV-2","ACAGTGATGAACTATA",6,59.61,10.03,-0.8,0.07,2.65,1,0,">1 nonsynonymous","E10R A33S K56M",3
"lib2","SARS-CoV-2","ACAGTGATTATTTGGG",3,43.42,10.74,-0.1,0.05,2.89,1.11,0,"1 nonsynonymous","T140I",1
"lib2","SARS-CoV-2","ACAGTGCATGACCACT",2,41.5,8.55,-2.28,0.2,1.57,1.11,0.01,">1 nonsynonymous","A89V G116L P149L",3
"lib2","SARS-CoV-2","ACAGTGCATTGGCCGT",2,17.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D90L L183S T201K",3
"lib2","SARS-CoV-2","ACAGTGCCGATAAGAA",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K C61A D97S Y165D",4
"lib2","SARS-CoV-2","ACAGTGCCTACAAAAG",7,125.31,9.59,-1.24,0.07,2.08,1.06,0,">1 nonsynonymous","N24A A89N",2
"lib2","SARS-CoV-2","ACAGTGCCTACTTCCA",1,6.56,10.59,-0.25,0.12,2.73,1.3,0,"wildtype","",0
"lib2","SARS-CoV-2","ACAGTGCGAGATAATA",3,40.63,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R27T S36E K94H G101S T140I G155F",6
"lib2","SARS-CoV-2","ACAGTGCTATCAACAA",10,80.87,10.21,-0.63,0.03,2.87,1.06,0,">1 nonsynonymous","C61S T100N L111H",3
"lib2","SARS-CoV-2","ACAGTGCTGGAACGAA",2,15.99,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","L5S P96M C150L V153Q",4
"lib2","SARS-CoV-2","ACAGTGGACAATGATA",8,129.46,10.82,-0.02,0.04,2.89,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTGTATAGATTTA",9,25.46,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","I2D I80T G117L F160I A190S",5
"lib2","SARS-CoV-2","ACAGTGTCACGACATC",7,122.12,6.18,-4.66,0.57,1.5,1.15,0.01,">1 nonsynonymous","G9S C61G S113M S129C F156L",5
"lib2","SARS-CoV-2","ACAGTGTCGAAATACC",5,96.46,10.84,0,0.05,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ACAGTGTCTTAGGTAT",6,12.52,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S139R Y143S Y175I E186I",4
"lib2","SARS-CoV-2","ACAGTGTGGCAGTAAG",8,60.59,8.25,-2.58,0.14,1.5,1.03,0.01,">1 nonsynonymous","Q84L Y178R",2
"lib2","SARS-CoV-2","ACAGTTAAAAAAACAT",5,41.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I72K I80Y N118G K198P",4
"lib2","SARS-CoV-2","ACAGTTAAAATTCATT",5,151.14,9.69,-1.14,0.04,2.79,1.09,0,">1 nonsynonymous","V37S F44W P177S T201L",4
"lib2","SARS-CoV-2","ACAGTTAACATACCCA",3,31.4,10.21,-0.63,0.06,2.9,1,0,">1 nonsynonymous","V37Y S113A Y178T",3
"lib2","SARS-CoV-2","ACAGTTAACGATAAAG",2,10.2,10.2,-0.63,0.17,2.71,1.12,0.02,">1 nonsynonymous","P7L A33N",2
"lib2","SARS-CoV-2","ACAGTTAATAAATACT",9,44.08,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y91V F99D Q163F",3
"lib2","SARS-CoV-2","ACAGTTACCACGCAGC",5,110.36,10.91,0.08,0.06,2.9,1.12,0,"1 nonsynonymous","L111V",1
"lib2","SARS-CoV-2","ACAGTTACCGTCCAAA",10,266.1,10.87,0.03,0.05,2.92,1.1,0,">1 nonsynonymous","S36N S184T",2
"lib2","SARS-CoV-2","ACAGTTACGAAAAGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S V37T G116K Q176K",4
"lib2","SARS-CoV-2","ACAGTTACGTAGTAGT",8,100.26,9.01,-1.83,0.16,1.5,1.02,0.01,">1 nonsynonymous","S19E Y123L",2
"lib2","SARS-CoV-2","ACAGTTAGTGTGTCTA",7,64.68,6,-4.84,1.36,1.5,1.07,0,">1 nonsynonymous","Q84H Y175I",2
"lib2","SARS-CoV-2","ACAGTTATAACGACGC",8,29.97,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A14W N157K",2
"lib2","SARS-CoV-2","ACAGTTATAATATCTT",14,319.28,9.97,-0.87,0.04,2.71,1.06,0,">1 nonsynonymous","N1V G116T P149F",3
"lib2","SARS-CoV-2","ACAGTTATTTTAAAAA",3,5.64,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N151L L183R",2
"lib2","SARS-CoV-2","ACAGTTCAAGACATTG",3,66.52,10.77,-0.07,0.03,2.9,1.1,0,"1 nonsynonymous","A42W",1
"lib2","SARS-CoV-2","ACAGTTCCCTGTTATG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G C61D",2
"lib2","SARS-CoV-2","ACAGTTCCGTTCAGTA",5,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F G51Y R124Y K132C F156L",5
"lib2","SARS-CoV-2","ACAGTTCTACATTGTG",2,8.52,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","Y50T L57I T85K F99K G146S G166W",6
"lib2","SARS-CoV-2","ACAGTTCTAGTAGAAT",3,31.88,7.84,-2.99,0.29,1.5,1,0.03,">1 nonsynonymous","Q84R P96Y",2
"lib2","SARS-CoV-2","ACAGTTCTGAACTCAC",2,19.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4G G101S",2
"lib2","SARS-CoV-2","ACAGTTCTGAGCACAA",2,15.28,9.52,-1.32,0.14,1.91,1.14,0.01,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","ACAGTTGAGCTATTAA",3,46.8,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F17H V71Q N92H R136Y H189Y",5
"lib2","SARS-CoV-2","ACAGTTGATACGATCT",14,157.17,10.8,-0.04,0.04,2.98,1.04,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","ACAGTTGCAGATAGCA",9,74.91,6,-4.84,2,1.5,1.11,0,"1 nonsynonymous","F167V",1
"lib2","SARS-CoV-2","ACAGTTGCATTATCCT",1,5.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L38S F44T F99R",3
"lib2","SARS-CoV-2","ACAGTTGGACTACCCC",5,20.43,10.86,0.02,0.07,2.92,1.08,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","ACAGTTTAATATCAAT",9,56.28,10.74,-0.09,0.05,2.91,1.05,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","ACAGTTTAATGACAGA",4,37.97,7.68,-3.15,0.46,1.5,1.24,0.07,">1 nonsynonymous","A33R S108V G155R",3
"lib2","SARS-CoV-2","ACAGTTTACAAGAAAA",1,5.52,6.19,-4.65,2,3,1.02,0,">1 nonsynonymous","K56R S69E N120T C195D",4
"lib2","SARS-CoV-2","ACAGTTTGTGCTTACC",1,9.72,10.72,-0.11,0.09,2.92,1.13,0,"1 nonsynonymous","T3R",1
"lib2","SARS-CoV-2","ACATAAAAAATGTAGT",15,142.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","E10L P82F K199Y",3
"lib2","SARS-CoV-2","ACATAAAAGATGGCAT",3,145.44,10.81,-0.02,0.05,2.9,1.11,0,"1 nonsynonymous","S147G",1
"lib2","SARS-CoV-2","ACATAAAAGCAACCTA",13,98.75,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T3A S53R D68M A145N",4
"lib2","SARS-CoV-2","ACATAAAAGCAACTTA",8,166.22,10.73,-0.11,0.03,2.93,1.08,0,">1 nonsynonymous","G116T P197S",2
"lib2","SARS-CoV-2","ACATAAAAGCCCCTGT",6,72.93,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A81D C102Y F156L P197T",4
"lib2","SARS-CoV-2","ACATAAAAGTTACTAC",5,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E K56L I88D V103G L162W",5
"lib2","SARS-CoV-2","ACATAAAAGTTCTGTA",2,23.12,10.75,-0.09,0.14,2.5,1.12,0.02,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","ACATAAAATAACCGAC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","V71L T85E P96L Y121* Y178* T201S",6
"lib2","SARS-CoV-2","ACATAAAATACCAAAC",4,84.02,7.66,-3.18,0.21,1.5,1.05,0.01,">1 nonsynonymous","V11R V37S Y178S",3
"lib2","SARS-CoV-2","ACATAAAATACGACCA",2,21.56,9.4,-1.44,0.1,1.96,1,0.01,">1 nonsynonymous","F8S I138N",2
"lib2","SARS-CoV-2","ACATAAAATCCAAGAC",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S184A",1
"lib2","SARS-CoV-2","ACATAAAATGTAACAC",6,81.78,10.61,-0.23,0.04,2.97,1.04,0,">1 nonsynonymous","A33G L188Y",2
"lib2","SARS-CoV-2","ACATAAACATAATTAT",2,26.66,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G86S L122H R136S",3
"lib2","SARS-CoV-2","ACATAAACATTTACAA",2,20.61,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","G101N N107M S139Y T201Y",4
"lib2","SARS-CoV-2","ACATAAACGATTTGAC",3,55.89,10.82,-0.01,0.05,2.96,1.05,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","ACATAAACTAGACCCT",7,19.95,6,-4.84,2,3,1.21,0,">1 nonsynonymous","Y66P D90T S200M",3
"lib2","SARS-CoV-2","ACATAAACTTAAACTT",6,31.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6Y N58F A105Q G117R",4
"lib2","SARS-CoV-2","ACATAAAGAATATTTG",1,53.46,10.25,-0.58,0.06,2.86,1.06,0,">1 nonsynonymous","V65F D98Q",2
"lib2","SARS-CoV-2","ACATAAAGCAAGAAGT",3,59.08,10.9,0.07,0.05,2.97,1.04,0,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","ACATAAAGGTGACCAG",4,57.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18L R27L Y35T L60S S129T P169I",6
"lib2","SARS-CoV-2","ACATAAAGTATTGCTC",8,0.65,NA,NA,NA,NA,NA,NA,"stop","S19* P169T",2
"lib2","SARS-CoV-2","ACATAAAGTGCTACAT",1,20.02,9.25,-1.58,0.13,2.91,1.17,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","ACATAAAGTGTTTCAG",12,199.74,9.7,-1.14,0.09,2.18,1.05,0,">1 nonsynonymous","T55S R78Y P96Q",3
"lib2","SARS-CoV-2","ACATAAATATAACATA",8,1.37,NA,NA,NA,NA,NA,NA,"stop","C61* Y123*",2
"lib2","SARS-CoV-2","ACATAAATATAAGTCG",5,101.03,9.05,-1.79,0.19,1.5,1.07,0.02,">1 nonsynonymous","V103L K114M",2
"lib2","SARS-CoV-2","ACATAAATATGTCGCG",6,65.95,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N107W P133R",2
"lib2","SARS-CoV-2","ACATAAATATTATGAA",2,10.92,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A33Q P96G A105K K114L S164P",5
"lib2","SARS-CoV-2","ACATAAATGTTAAAAA",16,80.23,7.25,-3.59,0.36,1.5,1.19,0.03,">1 nonsynonymous","L5F G51C A145G F160C",4
"lib2","SARS-CoV-2","ACATAAATTCGATAGA",7,80.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40I I88K V173K",3
"lib2","SARS-CoV-2","ACATAAATTTCAAAAA",9,132.48,10.86,0.02,0.04,2.94,1.07,0,">1 nonsynonymous","N130P S184V",2
"lib2","SARS-CoV-2","ACATAAATTTCATGTA",12,8.64,NA,NA,NA,NA,NA,NA,"stop","Y35I N40* T46A C102L",4
"lib2","SARS-CoV-2","ACATAACAAATGAATA",1,34.93,10.79,-0.05,0.06,2.92,1.01,0,"1 nonsynonymous","N120W",1
"lib2","SARS-CoV-2","ACATAACAATATTACA",1,6.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33I L95T K128N Q168L",4
"lib2","SARS-CoV-2","ACATAACACCAACAAA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P C150M",2
"lib2","SARS-CoV-2","ACATAACACGCTTGCG",5,49.27,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38W Q176F",2
"lib2","SARS-CoV-2","ACATAACACTATATCC",2,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y K87T",2
"lib2","SARS-CoV-2","ACATAACCAAAAAACC",9,189.29,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K26T F62L D68C F99R A105L E135V",6
"lib2","SARS-CoV-2","ACATAACCACGTAACA",2,8.68,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","ACATAACCATTAATCT",8,2.84,NA,NA,NA,NA,NA,NA,"stop","C49V L60* T85F G146T N151I",5
"lib2","SARS-CoV-2","ACATAACCGTCCTGTG",6,131.92,10.44,-0.39,0.05,2.87,1.07,0,"1 nonsynonymous","S164G",1
"lib2","SARS-CoV-2","ACATAACGCGTTAACC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147I",1
"lib2","SARS-CoV-2","ACATAACGTAACTTGT",4,88.72,10.97,0.13,0.04,3,1.02,0,"1 nonsynonymous","K128D",1
"lib2","SARS-CoV-2","ACATAACGTTTAATCA",8,98.58,10.76,-0.08,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAACTATTAGAAC",2,35.3,6.16,-4.68,1.29,1.57,1.21,0.06,">1 nonsynonymous","S43M I88W",2
"lib2","SARS-CoV-2","ACATAACTATTTTAAA",4,99.01,10.54,-0.29,0.05,2.98,1.02,0,">1 nonsynonymous","K26T K114N E154N",3
"lib2","SARS-CoV-2","ACATAACTCAACACCC",5,3.52,NA,NA,NA,NA,NA,NA,"stop","C6E S29W F62* G86T K198V",5
"lib2","SARS-CoV-2","ACATAACTGAAAATCT",15,117.59,10.75,-0.09,0.05,2.92,1.07,0,">1 nonsynonymous","F44I N64T F134Y",3
"lib2","SARS-CoV-2","ACATAACTGAATCATT",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101K G152I T201E",3
"lib2","SARS-CoV-2","ACATAACTTACCTGTT",2,52.6,10.9,0.06,0.07,2.96,1.05,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","ACATAACTTAGTAAAA",7,69.04,10.86,0.03,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAAGAATATGTAA",1,9.56,6.87,-3.97,0.57,1.5,1,0.05,">1 nonsynonymous","F8C L95G N107L",3
"lib2","SARS-CoV-2","ACATAAGACCCCTCCC",1,16.57,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D90Y F99V Y175T T201S",4
"lib2","SARS-CoV-2","ACATAAGACTTTAAGC",6,27.34,10.78,-0.06,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAAGATTGAAAAA",5,71.2,10.49,-0.35,0.04,2.98,1.02,0,"1 nonsynonymous","E154M",1
"lib2","SARS-CoV-2","ACATAAGCATTAAGGG",3,134.36,8.65,-2.19,0.09,2.87,1.08,0,">1 nonsynonymous","T85Y Q168L Y175F",3
"lib2","SARS-CoV-2","ACATAAGCTCAACAGA",4,73.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9T F167S",2
"lib2","SARS-CoV-2","ACATAAGGATATTAAA",5,33.58,10.94,0.11,0.05,2.97,1.05,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","ACATAAGGATGCCATA",2,12.75,7.46,-3.37,0.54,1.67,1.22,0.05,">1 nonsynonymous","Y39I T63S L183R",3
"lib2","SARS-CoV-2","ACATAAGTAAAAAGTA",7,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T T15Q A33F S43L D59R P96F S113K",7
"lib2","SARS-CoV-2","ACATAAGTAACCGCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* Y21W G51F G83I F126M",5
"lib2","SARS-CoV-2","ACATAAGTAGAATGGA",5,63.88,6.86,-3.98,0.23,1.5,1.06,0.01,">1 nonsynonymous","R27C Y121I I142A G155A",4
"lib2","SARS-CoV-2","ACATAAGTCCCCACCA",5,91.17,10.05,-0.79,0.06,2.56,1.07,0,">1 nonsynonymous","G9A G51V",2
"lib2","SARS-CoV-2","ACATAAGTGACACTGA",8,232.76,10.15,-0.69,0.03,2.95,1.05,0,">1 nonsynonymous","P54R K87S N120I",3
"lib2","SARS-CoV-2","ACATAAGTGCCTATGA",9,63.58,7.39,-3.45,0.16,1.5,1.04,0.01,">1 nonsynonymous","A22C K87Y N107L",3
"lib2","SARS-CoV-2","ACATAAGTTCCTAGTT",1,61.41,10.8,-0.04,0.05,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAAGTTGTAACAA",8,107.61,7.83,-3,0.14,1.72,1.11,0.01,"1 nonsynonymous","R73F",1
"lib2","SARS-CoV-2","ACATAATAACAACTAA",1,11.43,10.3,-0.54,0.08,3,1.03,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","ACATAATAGCTCAGCT",4,94.69,9.84,-0.99,0.07,2.65,1.02,0,"1 nonsynonymous","I28G",1
"lib2","SARS-CoV-2","ACATAATATTATCGTA",13,89.96,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F12T P82L N92V",3
"lib2","SARS-CoV-2","ACATAATCAAATGAGA",7,15.94,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","I104K P133Q S139N S147R F156L",5
"lib2","SARS-CoV-2","ACATAATCGAGATCAT",9,95.16,6.1,-4.74,1,1.5,1.23,0.03,">1 nonsynonymous","S36N L95F Y123W",3
"lib2","SARS-CoV-2","ACATAATTACGCCGCA",1,18.78,8,-2.84,0.22,1.85,1.1,0.02,">1 nonsynonymous","Y39D L60E V181L",3
"lib2","SARS-CoV-2","ACATAATTGAGAGCAG",2,45.4,8.75,-2.08,0.08,2.69,1.13,0,"1 nonsynonymous","P161N",1
"lib2","SARS-CoV-2","ACATAATTTATGAAAA",3,56.67,10.79,-0.04,0.06,2.89,1.11,0,"1 nonsynonymous","P7E",1
"lib2","SARS-CoV-2","ACATACAAACCTTCCG",4,21.93,8.17,-2.66,0.24,1.5,1.07,0.02,">1 nonsynonymous","T55Y G86E K198Q",3
"lib2","SARS-CoV-2","ACATACAAACTCGTCG",1,84.64,10.86,0.03,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATACAAGCATCAAA",1,48.06,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L38G G172L",2
"lib2","SARS-CoV-2","ACATACACACAAGCCG",2,44.74,8.52,-2.32,0.12,2.59,1.01,0,">1 nonsynonymous","S41Y G117Q G152Y",3
"lib2","SARS-CoV-2","ACATACACACCTAGCG",2,23.4,10.64,-0.2,0.05,2.84,1.17,0,">1 nonsynonymous","K48Q T55M N120S",3
"lib2","SARS-CoV-2","ACATACAGAAAACCTT",1,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71S D90S A105G",3
"lib2","SARS-CoV-2","ACATACAGAGATTCAA",2,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T K56T",2
"lib2","SARS-CoV-2","ACATACAGCCCATAAA",12,256.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I138L C150L G172A",3
"lib2","SARS-CoV-2","ACATACAGCCTAACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35K D98* N110T L131G C158W",5
"lib2","SARS-CoV-2","ACATACATATAACGTA",5,23.29,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACATACATATCACTAG",1,3.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132I",1
"lib2","SARS-CoV-2","ACATACATCAATCAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C6H A89T P96R N107D N120L K132P S139*",7
"lib2","SARS-CoV-2","ACATACATCAGAACCT",5,68.61,10.96,0.12,0.04,2.92,1.08,0,"1 nonsynonymous","I104F",1
"lib2","SARS-CoV-2","ACATACATCCCACAGC",5,52.16,8.71,-2.12,0.19,1.5,1.11,0.01,">1 nonsynonymous","K48Y K132V Q144V",3
"lib2","SARS-CoV-2","ACATACATGGACGTGA",5,39.76,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","R25V N107K Y119Q N130M T201Y",5
"lib2","SARS-CoV-2","ACATACATTCGGGGAT",8,188.25,9.82,-1.01,0.07,2.36,1.06,0,">1 nonsynonymous","G83C E154G V181I",3
"lib2","SARS-CoV-2","ACATACCAATAGTATA",7,1.29,NA,NA,NA,NA,NA,NA,"stop","C61L D98F L122*",3
"lib2","SARS-CoV-2","ACATACCAGGCGTGGA",5,42.98,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L95M W106C Y119P K132V",4
"lib2","SARS-CoV-2","ACATACCCAACGTCCG",3,96.2,10.14,-0.7,0.05,2.73,1.01,0,">1 nonsynonymous","A14T D97G",2
"lib2","SARS-CoV-2","ACATACCCCCCTTTAC",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118L P191F",2
"lib2","SARS-CoV-2","ACATACCCTTATCGTA",4,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T R73G Y93V D112R",4
"lib2","SARS-CoV-2","ACATACCGATAACTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V D98S V103P",3
"lib2","SARS-CoV-2","ACATACCTAGCAATCG",2,102.39,10.85,0.01,0.05,2.9,1.11,0,">1 nonsynonymous","G83L Q163A K199T",3
"lib2","SARS-CoV-2","ACATACCTATTGACAA",4,93.34,10.59,-0.25,0.04,2.84,1.1,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","ACATACCTCCACTCTT",4,113.04,10.8,-0.03,0.06,2.89,1.07,0,">1 nonsynonymous","I2K E141S",2
"lib2","SARS-CoV-2","ACATACGAACAGATTC",5,41.51,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A105D E141T P161I V173R",4
"lib2","SARS-CoV-2","ACATACGAAGCCGACA",7,107.65,9.66,-1.18,0.05,1.88,1.06,0,">1 nonsynonymous","N1C R16L N107S",3
"lib2","SARS-CoV-2","ACATACGCAACAAAGC",1,5.96,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50I A81S V103I V115T F126K",5
"lib2","SARS-CoV-2","ACATACGCAAGCGAGG",8,8.01,NA,NA,NA,NA,NA,NA,"stop","C31Q S45L T63H K87S V103* S184F",6
"lib2","SARS-CoV-2","ACATACGGAGGACTCA",8,0.1,NA,NA,NA,NA,NA,NA,"stop","S43* A89N L122V",3
"lib2","SARS-CoV-2","ACATACGGCTACCCAT",5,20.68,6.1,-4.74,1.13,1.5,1.12,0.03,">1 nonsynonymous","C49S N120T C150S C158S",4
"lib2","SARS-CoV-2","ACATACGGTACTGAAT",9,64.88,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N24Y P82C R136G",3
"lib2","SARS-CoV-2","ACATACGGTTAATCTG",2,26.26,10.86,0.03,0.08,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATACGTACGTGTCG",4,39.97,10.65,-0.19,0.07,2.99,1.02,0,"1 nonsynonymous","S53W",1
"lib2","SARS-CoV-2","ACATACGTACTCGTGA",6,90.48,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","N92R",1
"lib2","SARS-CoV-2","ACATACGTAGGGTTGT",3,1.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20E",1
"lib2","SARS-CoV-2","ACATACGTCTGCGACC",4,40.44,10.45,-0.39,0.05,2.88,1.11,0,">1 nonsynonymous","Y39F P54T G83S",3
"lib2","SARS-CoV-2","ACATACTAAAACGAGT",2,46.84,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G9H I28N Y93F P133T T201L",5
"lib2","SARS-CoV-2","ACATACTACAGTTCAA",8,20.52,10.8,-0.04,0.08,2.67,1.35,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATACTACCGGCCTG",3,15.82,8.28,-2.55,0.43,1.5,1.02,0.07,"1 nonsynonymous","V182L",1
"lib2","SARS-CoV-2","ACATACTCAATGTGCC",4,46.92,6.92,-3.91,0.34,1.5,1.26,0.02,">1 nonsynonymous","W23H D68M",2
"lib2","SARS-CoV-2","ACATACTCTGAGGCAT",6,98.26,10.56,-0.28,0.05,2.92,1.02,0,">1 nonsynonymous","T140M V180I",2
"lib2","SARS-CoV-2","ACATACTTAGACGTCA",15,212.69,10.68,-0.15,0.05,2.9,1.1,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","ACATACTTATAGATCT",3,53.27,8.19,-2.65,0.14,2.75,1.05,0.01,">1 nonsynonymous","E10L T100I N157T",3
"lib2","SARS-CoV-2","ACATACTTGGAGACTT",10,32.73,9.74,-1.1,0.11,2.14,1,0.01,">1 nonsynonymous","F44S A81V",2
"lib2","SARS-CoV-2","ACATACTTTCATTGGT",22,5.41,NA,NA,NA,NA,NA,NA,"stop","Y50T Y119* R136G V173P",4
"lib2","SARS-CoV-2","ACATAGAAAATATGCA",4,2.12,NA,NA,NA,NA,NA,NA,"stop","L122D K132* K199A",3
"lib2","SARS-CoV-2","ACATAGAAACAGTTCT",4,68.1,6,-4.84,1.25,1.5,1.2,0.01,">1 nonsynonymous","P82C P96S N110L Y178N",4
"lib2","SARS-CoV-2","ACATAGAAACTTCAGT",4,34.8,10.71,-0.12,0.07,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAGAAAGACTAAG",2,0.35,NA,NA,NA,NA,NA,NA,"stop","C6K V11I W23* S45F Y91T N118L S139V",7
"lib2","SARS-CoV-2","ACATAGAACCAATTGA",5,23.09,7.87,-2.97,0.17,1.5,1.02,0.01,">1 nonsynonymous","A42R N120K R127L G152E",4
"lib2","SARS-CoV-2","ACATAGAACCCGCTAG",4,62.08,8.78,-2.05,0.08,2.42,1.1,0,"1 nonsynonymous","Y165V",1
"lib2","SARS-CoV-2","ACATAGAACGTCCATC",8,96.32,10.81,-0.02,0.06,2.91,1.1,0,">1 nonsynonymous","L5H R16V N110Q",3
"lib2","SARS-CoV-2","ACATAGAAGCTACTAA",2,10.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G101V T201K",2
"lib2","SARS-CoV-2","ACATAGACAACTGACA",1,40.88,9.95,-0.89,0.06,2.87,1.08,0,">1 nonsynonymous","D34K Y175F",2
"lib2","SARS-CoV-2","ACATAGACACCACAAT",4,40.24,10.85,0.02,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAGACCAAAAAAA",11,193.88,10.86,0.02,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATAGACGCAAATCT",12,205.67,8.89,-1.95,0.05,2.95,1.06,0,">1 nonsynonymous","A105S F126K",2
"lib2","SARS-CoV-2","ACATAGACGTAAATGG",5,77.78,10.81,-0.02,0.06,2.87,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATAGACTACAGCAT",3,125.68,10.71,-0.12,0.04,2.93,1.07,0,">1 nonsynonymous","A18T K132R P197R",3
"lib2","SARS-CoV-2","ACATAGACTTACCCGG",9,157.28,10.72,-0.12,0.03,2.97,1.04,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","ACATAGAGAGAACCCG",15,183.41,10.27,-0.56,0.04,2.91,1.03,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","ACATAGATAATCTATC",4,46.58,6.27,-4.57,0.47,1.5,1.09,0.01,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","ACATAGATCAATACAG",3,14.63,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C49T L60V A89L G172E S184R",5
"lib2","SARS-CoV-2","ACATAGATTAAATCAC",10,26.95,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V103H T170M",2
"lib2","SARS-CoV-2","ACATAGCAATACTGCG",6,74.61,6.49,-4.34,0.3,2.12,1.25,0.01,">1 nonsynonymous","S113R G155C K199R",3
"lib2","SARS-CoV-2","ACATAGCACAAATGCT",6,5.76,NA,NA,NA,NA,NA,NA,"stop","T55C A145S C150*",3
"lib2","SARS-CoV-2","ACATAGCACCCAAGTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94N",1
"lib2","SARS-CoV-2","ACATAGCCCCCAAAAC",6,26.22,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4L S19L E135G",3
"lib2","SARS-CoV-2","ACATAGCCCCCCAGAC",5,32.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50L Y175D",2
"lib2","SARS-CoV-2","ACATAGCTCATTTACT",1,5.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","ACATAGCTCCTAGTAC",11,7.78,NA,NA,NA,NA,NA,NA,"stop","N4* R127* E141G",3
"lib2","SARS-CoV-2","ACATAGCTTATATACC",6,29.71,6,-4.84,1.41,1.88,1.1,0,">1 nonsynonymous","A14F A105Q L183Y",3
"lib2","SARS-CoV-2","ACATAGGAAAACGACA",16,149.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L131E I138Q",2
"lib2","SARS-CoV-2","ACATAGGAACTTGATA",2,7.71,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","S43I F47L C61G A81E A105L",5
"lib2","SARS-CoV-2","ACATAGGACCAGACAG",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S D98A D112L V181G",4
"lib2","SARS-CoV-2","ACATAGGCATTAATGC",1,56.36,10.3,-0.54,0.06,2.89,1.02,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","ACATAGGCGCGCAGCG",3,1.52,NA,NA,NA,NA,NA,NA,"stop","C31S K114* V173F",3
"lib2","SARS-CoV-2","ACATAGGCTAGTGGTT",5,60.14,9.59,-1.24,0.07,1.95,1.04,0,">1 nonsynonymous","A105N S200D",2
"lib2","SARS-CoV-2","ACATAGGGACTAAAGA",3,8.65,10.73,-0.1,0.05,3,1,0,">1 nonsynonymous","P7V F17W A42R E141T",4
"lib2","SARS-CoV-2","ACATAGGGCACTAGGG",2,20.2,10.63,-0.21,0.05,2.94,1.04,0,"1 nonsynonymous","N64S",1
"lib2","SARS-CoV-2","ACATAGGGCGACCAAA",11,297.12,10.17,-0.67,0.05,2.72,1.01,0,">1 nonsynonymous","I88L S184V",2
"lib2","SARS-CoV-2","ACATAGGTCGATAATA",3,0,NA,NA,NA,NA,NA,NA,"stop","T3L A14* D75M L95K",4
"lib2","SARS-CoV-2","ACATAGTAAATCCCTT",15,75.8,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T100P N151P",2
"lib2","SARS-CoV-2","ACATAGTCATAGCCAC",4,98.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N110E G155I G172A",3
"lib2","SARS-CoV-2","ACATAGTCCTCAAAAA",2,47.44,10.22,-0.61,0.06,2.84,1.05,0,">1 nonsynonymous","F8Y C61T A89S N130M",4
"lib2","SARS-CoV-2","ACATAGTGAAAACTCA",4,52.24,10.87,0.03,0.06,2.88,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATAGTGCGGCCACC",7,53.67,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44R N58S T85H Q144R G152R F167R",6
"lib2","SARS-CoV-2","ACATAGTTTTCTGTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","P7* A14I R124C N130L",4
"lib2","SARS-CoV-2","ACATATAAATACTATC",4,252.88,10.19,-0.64,0.05,2.62,1.04,0,">1 nonsynonymous","D90L D97I T100L",3
"lib2","SARS-CoV-2","ACATATAACCCAGCAA",5,21.52,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D90S V103T C150S L187F",4
"lib2","SARS-CoV-2","ACATATAACCGATTGC",8,94.04,6.77,-4.07,0.36,1.5,1.16,0.02,">1 nonsynonymous","L60N W106C K114N",3
"lib2","SARS-CoV-2","ACATATAAGAACGCCA",7,91.89,8.8,-2.03,0.08,2.79,1.11,0,">1 nonsynonymous","G146K G152N K199L",3
"lib2","SARS-CoV-2","ACATATAAGACGTAGT",4,60.64,9.87,-0.97,0.07,2.29,1.05,0,">1 nonsynonymous","N1R L57G T85A",3
"lib2","SARS-CoV-2","ACATATAAGCCGACAA",1,36.98,10.27,-0.57,0.06,2.89,1.07,0,">1 nonsynonymous","Y39Q S45Y E141Q",3
"lib2","SARS-CoV-2","ACATATAATAGCATTT",2,1.9,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","ACATATAATATCCTAC",1,80.25,8.65,-2.19,0.09,2.96,1.05,0,">1 nonsynonymous","Y119S K128I F156R",3
"lib2","SARS-CoV-2","ACATATACATTCCATG",1,48.28,10.77,-0.06,0.07,2.87,1.14,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","ACATATACATTGTTTC",4,49.49,10.6,-0.24,0.05,2.9,1.08,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","ACATATACCACTACCC",9,598.15,7.13,-3.7,0.09,1.62,1.1,0,"1 nonsynonymous","C150P",1
"lib2","SARS-CoV-2","ACATATACCAGGACAT",4,17.63,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F12Y L60S P82R F167M",4
"lib2","SARS-CoV-2","ACATATACTCAAGCAA",2,12.03,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","I72F S108I K128G",3
"lib2","SARS-CoV-2","ACATATACTTCTATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K A22S V37E",3
"lib2","SARS-CoV-2","ACATATAGATCTGTTT",5,18.34,7.95,-2.89,0.3,1.5,1.06,0.03,">1 nonsynonymous","P96Q E141W",2
"lib2","SARS-CoV-2","ACATATAGCACTTCCT",1,41.65,6.58,-4.26,0.41,1.5,1.19,0.02,">1 nonsynonymous","K26R I142S Q163P",3
"lib2","SARS-CoV-2","ACATATAGCATGGACT",3,76.48,10.66,-0.18,0.03,2.96,1.06,0,">1 nonsynonymous","T3I Q163S",2
"lib2","SARS-CoV-2","ACATATAGGTAATCAA",4,18.94,6,-4.84,1.21,1.5,1.1,0.01,">1 nonsynonymous","F12R K114R D137F C150Y",4
"lib2","SARS-CoV-2","ACATATAGTCCAACCT",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P A33V G83T",3
"lib2","SARS-CoV-2","ACATATAGTGGATTAT",14,68.42,8.56,-2.28,0.25,1.5,1,0.03,">1 nonsynonymous","S45M A81F L122Q E141K",4
"lib2","SARS-CoV-2","ACATATAGTTAGCATC",3,23.66,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G116I R127M P161T",3
"lib2","SARS-CoV-2","ACATATATAAGAACCC",8,22.02,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T55A F156L F167I",3
"lib2","SARS-CoV-2","ACATATATAGTACTAC",3,63.92,8.94,-1.89,0.12,1.87,1.16,0,">1 nonsynonymous","N13S G83Y I142P N151F",4
"lib2","SARS-CoV-2","ACATATATATGAAATC",4,1.03,NA,NA,NA,NA,NA,NA,"stop","N4G R16L I28K N58V G174*",5
"lib2","SARS-CoV-2","ACATATATCGACGGGC",1,0.71,NA,NA,NA,NA,NA,NA,"stop","Y66T V103C N171*",3
"lib2","SARS-CoV-2","ACATATATGGTGGAAA",10,109.66,10.8,-0.04,0.06,2.9,1.1,0,">1 nonsynonymous","Y39R P149D",2
"lib2","SARS-CoV-2","ACATATATTAGACTTA",9,2.75,NA,NA,NA,NA,NA,NA,"stop","A18T Y50* A81E P82* V182Q",5
"lib2","SARS-CoV-2","ACATATATTGCATGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","D97F G117D F134* F160L",4
"lib2","SARS-CoV-2","ACATATATTGTCAAAA",2,14.05,9.66,-1.17,0.12,2.29,1.05,0.01,"1 nonsynonymous","F8G",1
"lib2","SARS-CoV-2","ACATATCAACATAAAA",2,80.76,10.36,-0.48,0.06,2.82,1.03,0,">1 nonsynonymous","I28M W106G L122K",3
"lib2","SARS-CoV-2","ACATATCAACGGGTTA",1,16.72,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F12R C150L T201N",3
"lib2","SARS-CoV-2","ACATATCACAAGTGGC",6,119.01,10.83,-0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATATCCCGAAAAAG",6,0.2,NA,NA,NA,NA,NA,NA,"stop","D34A N109I Q176*",3
"lib2","SARS-CoV-2","ACATATCCTAAAACGT",8,52.08,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T3L P133S C150V N157L",4
"lib2","SARS-CoV-2","ACATATCCTACAAGAA",5,96.49,10.72,-0.12,0.03,2.94,1.02,0,">1 nonsynonymous","T63V V153L",2
"lib2","SARS-CoV-2","ACATATCCTCTCACCA",13,143.54,10.28,-0.56,0.06,2.8,1,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","ACATATCGACTGACAT",5,57.18,9.04,-1.79,0.22,1.5,1.04,0.02,">1 nonsynonymous","I72T T140I S164Y Y178F",4
"lib2","SARS-CoV-2","ACATATCGCCCTGCGT",1,18.81,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T3Y P82L E154T",3
"lib2","SARS-CoV-2","ACATATCTACATTTCA",3,39.4,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F44N D75L L95M F134L",4
"lib2","SARS-CoV-2","ACATATCTACGCAATA",2,99.24,8.75,-2.08,0.06,2.87,1.1,0,">1 nonsynonymous","L122Y N171P",2
"lib2","SARS-CoV-2","ACATATCTATACGTGG",5,0.49,NA,NA,NA,NA,NA,NA,"stop","G9* Y39W T46V",3
"lib2","SARS-CoV-2","ACATATCTGAGAAAAA",3,1.91,NA,NA,NA,NA,NA,NA,"stop","N4S T15W K48* V173T T201S",5
"lib2","SARS-CoV-2","ACATATGACCCCCACA",1,39.03,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I28Q D98S F167L",3
"lib2","SARS-CoV-2","ACATATGAGAATACCA",1,4.1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACATATGATTGTCAAA",4,42.01,9.56,-1.27,0.22,1.57,1.04,0.03,">1 nonsynonymous","T15H T55H Y178R",3
"lib2","SARS-CoV-2","ACATATGCACGAAATA",6,25.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89P F99K",2
"lib2","SARS-CoV-2","ACATATGCAGAATAAG",2,9.62,9.77,-1.07,0.15,2.74,1,0.01,">1 nonsynonymous","I2D K26M D59T Q84K K132M F156S V173R",7
"lib2","SARS-CoV-2","ACATATGGCCGATAAG",1,19.29,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G9W C49V P96K T100P Y119G R136S",6
"lib2","SARS-CoV-2","ACATATGGTGCCGCCG",12,135.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L57K N157I",2
"lib2","SARS-CoV-2","ACATATGTACGACAAA",4,21.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5A Y93E W106G",3
"lib2","SARS-CoV-2","ACATATGTATCACAAA",2,37.86,10.85,0.01,0.09,2.84,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACATATGTATGTCCTA",3,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G S41E Q84G F134K",4
"lib2","SARS-CoV-2","ACATATGTATTGCTAC",4,88.26,10.86,0.02,0.07,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATATTAACCACTAA",7,103.73,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y21L C158Y F167G G196R",4
"lib2","SARS-CoV-2","ACATATTATCAATGGG",3,19.88,6,-4.84,2,1.5,1.39,0.06,">1 nonsynonymous","D68V G155A",2
"lib2","SARS-CoV-2","ACATATTCATCCATAC",5,33.87,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P82D T148S G152F",3
"lib2","SARS-CoV-2","ACATATTCATGTACCT",14,268.62,10.8,-0.04,0.03,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATATTCTGACATCA",2,15.37,9.98,-0.86,0.16,2.59,1.12,0.01,">1 nonsynonymous","N1V F62N P149M",3
"lib2","SARS-CoV-2","ACATATTGACACAAGT",3,19.27,6.87,-3.97,0.6,1.5,1.24,0.06,">1 nonsynonymous","D90V F167Q V173N",3
"lib2","SARS-CoV-2","ACATATTGCGGGCATA",3,35.45,10.73,-0.1,0.06,2.98,1.04,0,">1 nonsynonymous","T15E P149S",2
"lib2","SARS-CoV-2","ACATATTGGTGCCAAG",5,39.17,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L131N G146V",2
"lib2","SARS-CoV-2","ACATATTTCCTTTATG",11,252.53,10.46,-0.37,0.04,2.86,1.09,0,">1 nonsynonymous","A42L N120V",2
"lib2","SARS-CoV-2","ACATATTTTAACATCT",7,45.1,9.39,-1.45,0.2,1.5,1.11,0.02,">1 nonsynonymous","N1K C61S A89F",3
"lib2","SARS-CoV-2","ACATATTTTTGCAGCC",6,18.58,6.65,-4.19,0.42,2.01,1.14,0.03,">1 nonsynonymous","T15Y D68I I104S",3
"lib2","SARS-CoV-2","ACATCAAAAAATTGGG",1,8.25,8.24,-2.59,0.59,1.5,1.19,0.05,">1 nonsynonymous","V77K T85G L95F G116H S129F",5
"lib2","SARS-CoV-2","ACATCAAAAGTATGGA",1,46.75,10.22,-0.62,0.05,2.87,1,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","ACATCAAAATCACGGA",4,94.11,10.63,-0.2,0.03,3,1.03,0,">1 nonsynonymous","C61R Q84K",2
"lib2","SARS-CoV-2","ACATCAAACAGTCACA",7,1.06,NA,NA,NA,NA,NA,NA,"stop","R25G V37F C49S Y93C Y119V A145*",6
"lib2","SARS-CoV-2","ACATCAAACGATATAT",3,2.64,NA,NA,NA,NA,NA,NA,"stop","K26L A105* L122R L131G P177S",5
"lib2","SARS-CoV-2","ACATCAAAGCCCCGAA",2,0.99,NA,NA,NA,NA,NA,NA,"stop","D97E S164N G174*",3
"lib2","SARS-CoV-2","ACATCAAATAACTTAT",10,26.7,10.7,-0.13,0.05,2.88,1.12,0,">1 nonsynonymous","G116E N130L",2
"lib2","SARS-CoV-2","ACATCAAATAGCTACC",7,77.25,8.62,-2.22,0.17,1.57,1.1,0.01,">1 nonsynonymous","T55S D137G",2
"lib2","SARS-CoV-2","ACATCAACAGACAGCC",5,45.43,6.61,-4.22,0.36,1.5,1.11,0.01,">1 nonsynonymous","N4D F99V Y119M",3
"lib2","SARS-CoV-2","ACATCAAGAAACCTCT",7,2.56,NA,NA,NA,NA,NA,NA,"stop","D59G G86L W106* G155I Q163L Q176*",6
"lib2","SARS-CoV-2","ACATCAAGAATAATCG",19,39.43,6,-4.84,2,2.14,1.14,0,">1 nonsynonymous","V71M V180K",2
"lib2","SARS-CoV-2","ACATCAAGCGCAAAGA",11,143.74,10.63,-0.21,0.05,2.88,1.12,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","ACATCAAGGATAGGTG",14,1.75,NA,NA,NA,NA,NA,NA,"stop","C6* Y50L T140W",3
"lib2","SARS-CoV-2","ACATCAATAGTCTACG",3,40.09,9.46,-1.38,0.09,1.93,1.16,0,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","ACATCAATATGGCTTT",6,54.66,10.1,-0.74,0.07,2.96,1.05,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","ACATCAATGGGGATTT",4,72.74,10.8,-0.03,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCAATTACACACC",11,139.04,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R16I R124Y",2
"lib2","SARS-CoV-2","ACATCAATTAGTACAA",1,10.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13I F62A S113N Y121L N151C",5
"lib2","SARS-CoV-2","ACATCACAAAGTACAC",2,85.65,8.06,-2.78,0.17,1.85,1.14,0.01,">1 nonsynonymous","R25S E141D T170C",3
"lib2","SARS-CoV-2","ACATCACAACTAATCG",4,40.44,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L60I A67F S139I P149C",4
"lib2","SARS-CoV-2","ACATCACAATAGTTGA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3R D98* N110A F167L",4
"lib2","SARS-CoV-2","ACATCACAGACAGAAC",4,59.51,7.4,-3.44,0.13,2.25,1.11,0.01,">1 nonsynonymous","Y143I P149S T170C",3
"lib2","SARS-CoV-2","ACATCACAGCTCAGTG",1,5.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","ACATCACCAAATTGCC",5,23.24,7.55,-3.29,0.43,1.5,1,0.06,">1 nonsynonymous","N1K N4W R16T V103L P149V Q176L",6
"lib2","SARS-CoV-2","ACATCACCAGTAGTTG",1,11.17,10.38,-0.46,0.08,2.73,1.09,0.01,">1 nonsynonymous","G51S P54H",2
"lib2","SARS-CoV-2","ACATCACCGGGTGACA",1,14.34,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D68M P161T",2
"lib2","SARS-CoV-2","ACATCACCTTGAATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y K114R T140Y Y178K T201S",5
"lib2","SARS-CoV-2","ACATCACGAACAGCCT",1,74.36,9.67,-1.17,0.08,2.1,1.04,0,">1 nonsynonymous","G9E L38R V65G",3
"lib2","SARS-CoV-2","ACATCACGAGCCAATA",3,69.6,6.04,-4.8,0.89,1.5,1.09,0.02,">1 nonsynonymous","R124W L131Y",2
"lib2","SARS-CoV-2","ACATCACTGGAACGTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76S R127W Q163F G172N",4
"lib2","SARS-CoV-2","ACATCACTTCAATTAG",3,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y L60T R127G",3
"lib2","SARS-CoV-2","ACATCACTTGAACAAT",7,90.94,10.14,-0.69,0.1,2.33,1,0,">1 nonsynonymous","N1Q L38I G51A",3
"lib2","SARS-CoV-2","ACATCAGACCTAATAA",4,113.97,8.34,-2.5,0.1,2.23,1.04,0,">1 nonsynonymous","Q84V D112E Y119N P169R",4
"lib2","SARS-CoV-2","ACATCAGATTTCTATA",3,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S Y123S C158T",3
"lib2","SARS-CoV-2","ACATCAGCAAACATTA",2,38.62,10.71,-0.12,0.09,2.94,1.08,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","ACATCAGTGCGCAGAG",5,35.81,10.46,-0.38,0.1,2.84,1.05,0.01,">1 nonsynonymous","S41R V65F",2
"lib2","SARS-CoV-2","ACATCATATGACGATA",2,41.67,10.17,-0.66,0.07,2.79,1.09,0,"1 nonsynonymous","Y35E",1
"lib2","SARS-CoV-2","ACATCATCCTACCCAC",2,19.43,10.06,-0.78,0.16,2.06,1.04,0.01,">1 nonsynonymous","Y91K E141P",2
"lib2","SARS-CoV-2","ACATCATCTACTGACA",3,102.4,9.89,-0.95,0.08,2.34,1.08,0,">1 nonsynonymous","C6V D59Y",2
"lib2","SARS-CoV-2","ACATCATCTTATGCCA",5,48.55,7.07,-3.76,0.24,1.5,1.12,0.01,">1 nonsynonymous","N58L F167L",2
"lib2","SARS-CoV-2","ACATCATGAATACAAT",6,52.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D98E I104Y E141M P161V",4
"lib2","SARS-CoV-2","ACATCATGTCATAGCA",6,43.02,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A89N R124P V180R",3
"lib2","SARS-CoV-2","ACATCATTACCAAGGA",10,48.36,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y50N G51S",2
"lib2","SARS-CoV-2","ACATCATTGCGCGGTA",10,135.31,10.62,-0.22,0.04,2.89,1.08,0,">1 nonsynonymous","N1Y V115Y S129R",3
"lib2","SARS-CoV-2","ACATCATTTCCCTATT",3,131.85,10.87,0.03,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCATTTCGTACGC",4,21.84,10.07,-0.76,0.07,2.78,1.2,0,">1 nonsynonymous","G116D T148V S200E",3
"lib2","SARS-CoV-2","ACATCCAAAAATATTT",6,118.71,9.51,-1.32,0.07,1.83,1.06,0,">1 nonsynonymous","R16F L38F F134V",3
"lib2","SARS-CoV-2","ACATCCAAAATCTACG",4,35.32,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G86F C150M",2
"lib2","SARS-CoV-2","ACATCCAAATGACGGT",4,68.57,10.71,-0.13,0.06,2.9,1.09,0,"1 nonsynonymous","S41Q",1
"lib2","SARS-CoV-2","ACATCCAACAAGCGTA",14,222.22,8.79,-2.04,0.06,2.98,1.1,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","ACATCCAACTTATGGC",10,55.88,6.17,-4.67,0.96,1.5,1.24,0.03,">1 nonsynonymous","Y93P N118I T148N",3
"lib2","SARS-CoV-2","ACATCCAACTTGAACA",2,37.45,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L95R K114S E154R",3
"lib2","SARS-CoV-2","ACATCCACAAGTAAAA",2,36.29,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A33E P82L S108D A145C P161G",5
"lib2","SARS-CoV-2","ACATCCACATGTAACT",6,204.24,10.18,-0.65,0.04,2.81,1.04,0,">1 nonsynonymous","K56D D97I I142L P149Y L188I",5
"lib2","SARS-CoV-2","ACATCCACTACATCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21T K128N",2
"lib2","SARS-CoV-2","ACATCCATACAAGACA",5,112.32,10.08,-0.76,0.06,2.28,1.01,0,"1 nonsynonymous","Y50I",1
"lib2","SARS-CoV-2","ACATCCATCACGTCAA",11,147.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R73H D112V Y119E P149N T201S",5
"lib2","SARS-CoV-2","ACATCCATCTGACGAA",5,18.84,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C49N P54A P82G",3
"lib2","SARS-CoV-2","ACATCCCAAATGCTTT",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N T100G A105G Y123L E141R",5
"lib2","SARS-CoV-2","ACATCCCCAAATTTAT",3,50.94,10.65,-0.19,0.04,2.94,1.06,0,"1 nonsynonymous","K132W",1
"lib2","SARS-CoV-2","ACATCCCCAACCCCCT",1,42.06,10.86,0.02,0.07,2.88,1.11,0,">1 nonsynonymous","K26R V173Y",2
"lib2","SARS-CoV-2","ACATCCCCCGACTAAA",9,166.7,9.98,-0.86,0.22,1.5,1.09,0.02,"1 nonsynonymous","Y35D",1
"lib2","SARS-CoV-2","ACATCCCCCTAATCGA",9,190.47,9.79,-1.05,0.03,2.9,1.08,0,">1 nonsynonymous","N4K A42M G83N L125Q",4
"lib2","SARS-CoV-2","ACATCCCCGCTAGTAA",3,76.66,10.14,-0.69,0.06,2.69,1.04,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","ACATCCCCTTCAACAA",2,36.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S19L P96D A105Y C150W",4
"lib2","SARS-CoV-2","ACATCCCGAACAGGAG",8,38.9,10.86,0.02,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCCCGATAAAATT",3,55.48,10.13,-0.7,0.07,2.96,1.03,0,">1 nonsynonymous","A105T G174K",2
"lib2","SARS-CoV-2","ACATCCCGCCCCAGAT",4,46.87,9.22,-1.62,0.13,1.74,1.09,0.01,">1 nonsynonymous","S45Y P96K",2
"lib2","SARS-CoV-2","ACATCCCGCCTCTGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35A G86S Y121* K128L T170A A190V",6
"lib2","SARS-CoV-2","ACATCCCTAGAGATTT",3,28.81,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F99L V103L",2
"lib2","SARS-CoV-2","ACATCCCTTAATATAG",4,30.17,9.96,-0.88,0.1,2.54,1.07,0,"1 nonsynonymous","S139W",1
"lib2","SARS-CoV-2","ACATCCCTTCAGCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V I138P",2
"lib2","SARS-CoV-2","ACATCCGAATAGCGAG",5,0.93,NA,NA,NA,NA,NA,NA,"stop","A22W N40* S43L N107M E141S",5
"lib2","SARS-CoV-2","ACATCCGCAATAACAT",14,198.99,10.85,0.02,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCCGTAAATTATG",2,27.21,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V77K N92T",2
"lib2","SARS-CoV-2","ACATCCGTCTTTGCCG",1,77.03,8.31,-2.53,0.11,2.59,1.07,0,">1 nonsynonymous","E141Q N157Y",2
"lib2","SARS-CoV-2","ACATCCTATGGGTTCT",14,160.43,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","K26W C61A I88N L125G E141W",5
"lib2","SARS-CoV-2","ACATCCTCGAATATAA",3,42.26,10.99,0.15,0.06,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCCTTTACTAACC",1,17.67,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","ACATCCTTTTCAATAA",7,101.63,9.89,-0.95,0.03,2.86,1.04,0,">1 nonsynonymous","K132C Y159H",2
"lib2","SARS-CoV-2","ACATCGAACGCGTGCC",5,158.11,10.26,-0.57,0.05,2.61,1.05,0,">1 nonsynonymous","D98T K128P G152S Q163T",4
"lib2","SARS-CoV-2","ACATCGAGGCAAAAGT",3,85.46,7.57,-3.26,0.21,1.5,1.17,0.01,">1 nonsynonymous","C31K I88L",2
"lib2","SARS-CoV-2","ACATCGCATAATATCG",7,3.12,NA,NA,NA,NA,NA,NA,"stop","G9C C102Q Y123*",3
"lib2","SARS-CoV-2","ACATCGCATCCAACCC",5,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C F44W C49F G86I N118R V180Y",6
"lib2","SARS-CoV-2","ACATCGCTGCTGCTAC",2,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48S I88T N107V C150D",4
"lib2","SARS-CoV-2","ACATCGCTTATGAGTA",1,19.42,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","Q144P V182L",2
"lib2","SARS-CoV-2","ACATCGGAACAAAAGG",6,74.06,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G74P S113R Q144E",3
"lib2","SARS-CoV-2","ACATCGGATCAATGCG",13,0.18,NA,NA,NA,NA,NA,NA,"stop","D59L Y119T C158*",3
"lib2","SARS-CoV-2","ACATCGGTAACATACC",2,35.69,9.38,-1.46,0.06,2.9,1.06,0,">1 nonsynonymous","Y119L T201R",2
"lib2","SARS-CoV-2","ACATCGTAGCCTCTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V N64S N107G",3
"lib2","SARS-CoV-2","ACATCGTAGTAAAGCC",11,328.01,10.34,-0.49,0.04,2.94,1.08,0,"1 nonsynonymous","N118Q",1
"lib2","SARS-CoV-2","ACATCGTCATATTATT",12,103,9.13,-1.71,0.25,1.5,1,0.03,">1 nonsynonymous","F47S Y178C",2
"lib2","SARS-CoV-2","ACATCGTTAGAACCCA",11,135.44,10.75,-0.09,0.03,3,1,0,">1 nonsynonymous","T55P F62W K114F",3
"lib2","SARS-CoV-2","ACATCTAACCACCAAT",2,23.59,10.65,-0.19,0.1,2.85,1.14,0,">1 nonsynonymous","T15H T85R",2
"lib2","SARS-CoV-2","ACATCTAACTTAGCTT",8,1.35,NA,NA,NA,NA,NA,NA,"stop","N13H C49G E76D V103* G155N P191L",6
"lib2","SARS-CoV-2","ACATCTAATCTTCTAA",6,53.02,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V71E Y91L P96Q F126R",4
"lib2","SARS-CoV-2","ACATCTAATGCAATCT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","N4F L122*",2
"lib2","SARS-CoV-2","ACATCTAATGTAAGCT",4,0,NA,NA,NA,NA,NA,NA,"stop","N13I A22T L125S L131*",4
"lib2","SARS-CoV-2","ACATCTAATTGAATTC",15,4.43,NA,NA,NA,NA,NA,NA,"stop","N4* K26T N64S D90C N107M",5
"lib2","SARS-CoV-2","ACATCTACTAAACACG",4,46.19,10.72,-0.11,0.03,2.98,1.04,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","ACATCTAGACCCAGAA",2,55.77,10.77,-0.07,0.06,2.89,1.04,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","ACATCTAGCATAATGA",9,129.91,9.22,-1.62,0.06,1.88,1.11,0,">1 nonsynonymous","N30T K128W S164G",3
"lib2","SARS-CoV-2","ACATCTAGTAAAATGA",3,10.78,9.65,-1.19,0.2,1.51,1.01,0.03,">1 nonsynonymous","N58L G83D K132F",3
"lib2","SARS-CoV-2","ACATCTATAATTTCTT",18,30.75,8.5,-2.33,0.2,1.5,1,0.02,">1 nonsynonymous","I2V W106D",2
"lib2","SARS-CoV-2","ACATCTATGAATAAGT",2,9.14,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","I2S V37R N58H G86Y G101D",5
"lib2","SARS-CoV-2","ACATCTATGTAATCAG",5,42.07,9.13,-1.71,0.11,1.89,1.08,0.01,">1 nonsynonymous","V71L L111S",2
"lib2","SARS-CoV-2","ACATCTCCACATTCTG",2,38.29,10.57,-0.27,0.07,2.71,1.09,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","ACATCTCCAGGTAAGT",5,13.81,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","F12V F99T",2
"lib2","SARS-CoV-2","ACATCTCCCGCTCACT",3,13.48,7.2,-3.64,0.35,1.5,1,0.03,">1 nonsynonymous","D68Q T140D",2
"lib2","SARS-CoV-2","ACATCTCGCAACGACT",12,83.02,10.68,-0.15,0.05,2.82,1.19,0,">1 nonsynonymous","I2V P54G",2
"lib2","SARS-CoV-2","ACATCTCTGTGACACC",5,105.06,10.11,-0.72,0.06,2.54,1.06,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","ACATCTCTTCAATACT",10,93.77,6.04,-4.79,0.66,1.5,1.1,0.01,">1 nonsynonymous","G51V Y165N G174E",3
"lib2","SARS-CoV-2","ACATCTGAAAGAAGAT",14,198.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38Q P82N R127L",3
"lib2","SARS-CoV-2","ACATCTGAAATAATAC",3,30.19,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S19V Y93T S108F T148S",4
"lib2","SARS-CoV-2","ACATCTGAAGACGTAC",3,70.14,10.14,-0.7,0.05,2.92,1.07,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","ACATCTGACCTACTGT",7,166.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9C A105L Y159S Y175R L188V T201V",6
"lib2","SARS-CoV-2","ACATCTGACTGTATGC",4,40.89,7.63,-3.21,0.23,1.5,1.11,0.02,">1 nonsynonymous","R127Y S164N",2
"lib2","SARS-CoV-2","ACATCTGATAAACAGT",3,74.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6T S139F G166K",3
"lib2","SARS-CoV-2","ACATCTGCTTTATAAT",11,58.09,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A22F C61Q F167S A190D",4
"lib2","SARS-CoV-2","ACATCTGGACACCCAA",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N C49Q Y91M V115T",4
"lib2","SARS-CoV-2","ACATCTTACAAAATCC",7,93.19,10.36,-0.47,0.06,2.96,1.04,0,">1 nonsynonymous","D97C K132M",2
"lib2","SARS-CoV-2","ACATCTTACACAACAA",14,311.96,10.49,-0.34,0.04,2.93,1.07,0,">1 nonsynonymous","V37L G116F",2
"lib2","SARS-CoV-2","ACATCTTACGTCAGCA",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F I72K",2
"lib2","SARS-CoV-2","ACATCTTAGCTGCAAA",8,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R A18W D34L K56S D90L G101D P133D Y143I",8
"lib2","SARS-CoV-2","ACATCTTGAAATATAA",17,143.82,9.67,-1.16,0.04,2.13,1.03,0,">1 nonsynonymous","Y35N K56H C61S S129L",4
"lib2","SARS-CoV-2","ACATCTTGCGCCTAGC",6,29.16,10.94,0.11,0.06,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATCTTTACCGACGA",2,65.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L Y143F G172C",3
"lib2","SARS-CoV-2","ACATCTTTAGAACTCT",5,23.24,7.17,-3.67,0.18,1.86,1.12,0.01,">1 nonsynonymous","G9C D59S N107V",3
"lib2","SARS-CoV-2","ACATCTTTATTTTCAA",3,1.08,NA,NA,NA,NA,NA,NA,"stop","T15P V103E N120P N151*",4
"lib2","SARS-CoV-2","ACATGAAAAAACAAGC",4,71.51,8.77,-2.07,0.08,2.97,1.04,0,">1 nonsynonymous","D90L S129D G166R",3
"lib2","SARS-CoV-2","ACATGAAAAAATCATA",5,16.77,6.11,-4.73,1.4,1.5,1.16,0.06,">1 nonsynonymous","Y39L T55V N92T I142R Q176S",5
"lib2","SARS-CoV-2","ACATGAAAACCATTAT",8,1.93,NA,NA,NA,NA,NA,NA,"stop","E10S T100* Q144R Y175G T201W",5
"lib2","SARS-CoV-2","ACATGAAACATGCGGC",8,49.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103N Y119M",2
"lib2","SARS-CoV-2","ACATGAAAGACAACGG",1,26.09,7.04,-3.79,0.13,2.08,1.13,0.01,">1 nonsynonymous","L5P C158G",2
"lib2","SARS-CoV-2","ACATGAAATCTTCACA",19,312.12,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8S S36L N118I Q176K",4
"lib2","SARS-CoV-2","ACATGAAATGACCGAA",8,186.94,10.77,-0.06,0.05,2.92,1.07,0,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","ACATGAAATGTTCCAG",1,7.45,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G74I S113F",2
"lib2","SARS-CoV-2","ACATGAAATTGAATTC",5,31.02,7.42,-3.42,0.25,1.5,1.04,0.02,">1 nonsynonymous","Y123I N157L",2
"lib2","SARS-CoV-2","ACATGAACAGAAGAAA",3,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E N118I P191L P197M",4
"lib2","SARS-CoV-2","ACATGAATCTCCAAAA",5,36.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94I Q144T P149T P161V",4
"lib2","SARS-CoV-2","ACATGACATTGGTTCC",8,35.45,7.82,-3.02,0.32,1.5,1.07,0.04,">1 nonsynonymous","T3L S45V V65R",3
"lib2","SARS-CoV-2","ACATGACCATGCAAGG",5,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G T15R V37C I88C K94D Y159C",6
"lib2","SARS-CoV-2","ACATGACCCAATCGTT",1,97.02,9.87,-0.96,0.06,2.83,1.08,0,">1 nonsynonymous","F12I N118A T201D",3
"lib2","SARS-CoV-2","ACATGACGACTGGTTA",12,255.6,10.06,-0.78,0.06,2.55,1.05,0,">1 nonsynonymous","F12V Y35S S200V",3
"lib2","SARS-CoV-2","ACATGACGCAAACCCT",6,68.25,10.81,-0.03,0.06,2.92,1.09,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","ACATGACGTAGCACGT",4,59.56,10.81,-0.03,0.06,2.93,1.05,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","ACATGACGTGCTCCAT",1,12.71,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D68K R136K G146S G152T",4
"lib2","SARS-CoV-2","ACATGACTAAACACAA",10,110.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I88M L122S Y165P",3
"lib2","SARS-CoV-2","ACATGACTAATCAAGA",5,57.37,10.9,0.07,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATGACTAGATTATA",2,11.66,9.76,-1.08,0.13,2.61,1.11,0.01,">1 nonsynonymous","A33L L122W F134I",3
"lib2","SARS-CoV-2","ACATGACTCAAAAAAT",8,35.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16I L38Y S43P D68R R136E",5
"lib2","SARS-CoV-2","ACATGACTCAAAAATC",2,14.25,10.42,-0.42,0.07,2.93,1.08,0,">1 nonsynonymous","I2N K56I Y66F",3
"lib2","SARS-CoV-2","ACATGACTCAAACGCT",2,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102K S113D K132D",3
"lib2","SARS-CoV-2","ACATGACTCAATATGT",3,67.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12C C61F Y159W Y175E",4
"lib2","SARS-CoV-2","ACATGACTCTTTAGAA",5,66.32,10.94,0.1,0.12,2.71,1.05,0.01,"synonymous","",0
"lib2","SARS-CoV-2","ACATGAGAACGCTTTA",8,66.09,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6G K26V D59S P82F",4
"lib2","SARS-CoV-2","ACATGAGACACAAGAA",12,51.05,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D90L Y123S R127L P149K",4
"lib2","SARS-CoV-2","ACATGAGAGTAAGAAA",13,113.23,10.17,-0.66,0.03,2.84,1.07,0,">1 nonsynonymous","N4Y G155R",2
"lib2","SARS-CoV-2","ACATGAGCAGCCTGAA",13,278.77,10.8,-0.04,0.05,2.92,1.08,0,">1 nonsynonymous","N24K C61N",2
"lib2","SARS-CoV-2","ACATGAGCATATATTT",14,198.66,7.92,-2.92,0.31,1.5,1.06,0.04,">1 nonsynonymous","A67V R78S L95A",3
"lib2","SARS-CoV-2","ACATGAGCATATTATA",7,66.5,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N1Y L122E R136Q Y143L Y178V G196R",6
"lib2","SARS-CoV-2","ACATGAGTCACAAATT",3,53.05,10.57,-0.26,0.07,2.94,1.03,0,">1 nonsynonymous","F62T S129F",2
"lib2","SARS-CoV-2","ACATGAGTTAGTAGGG",1,56.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6W R16S G172W",3
"lib2","SARS-CoV-2","ACATGATAAATGAAAT",5,32.72,6,-4.84,1.19,3,1.1,0.01,">1 nonsynonymous","W23L Y91Q L131Q Y178K",4
"lib2","SARS-CoV-2","ACATGATAAATTAGTC",4,16.21,6.02,-4.82,0.76,1.5,1.07,0.01,">1 nonsynonymous","N40R F99N W106V D112F",4
"lib2","SARS-CoV-2","ACATGATACAAATAAA",16,99.04,8.44,-2.4,0.1,1.56,1.08,0.01,">1 nonsynonymous","K94E T201G",2
"lib2","SARS-CoV-2","ACATGATATCAGCATT",3,18.93,10.15,-0.69,0.08,2.84,1.08,0,">1 nonsynonymous","A22S V52L G174R",3
"lib2","SARS-CoV-2","ACATGATCGCGAAGCT",13,117.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6K N107D N118D H189S",4
"lib2","SARS-CoV-2","ACATGATGAAATGCGA",10,97.38,10.4,-0.43,0.04,2.87,1.11,0,">1 nonsynonymous","D97N T170S",2
"lib2","SARS-CoV-2","ACATGATGTAAAACTG",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K S29L F47L T55F G83Q N118F",6
"lib2","SARS-CoV-2","ACATGATTAAAGTTTA",3,116.29,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L38D I80S D90N N107L G166L Q176L",6
"lib2","SARS-CoV-2","ACATGATTAAGAACAT",4,11.49,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","V52G Y123G C195Q",3
"lib2","SARS-CoV-2","ACATGATTGCTTGCCA",1,5.88,9.1,-1.73,0.35,2.19,1,0.03,">1 nonsynonymous","N13F N30I F156S",3
"lib2","SARS-CoV-2","ACATGCAAAAATCAAT",10,64.45,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T3R V20Q N118V",3
"lib2","SARS-CoV-2","ACATGCAATGACCGCA",20,191.38,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I2R Y35S I72L D98V Q168K",5
"lib2","SARS-CoV-2","ACATGCAATGTCAACG",2,74.07,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61V G86F E141C F167S",4
"lib2","SARS-CoV-2","ACATGCACAATATCTT",8,77.89,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A81S C150Y",2
"lib2","SARS-CoV-2","ACATGCACATCGCTAA",6,30.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95A V103R Q144G",3
"lib2","SARS-CoV-2","ACATGCACCAAAATAA",5,58.7,8.29,-2.55,0.23,1.5,1.02,0.02,">1 nonsynonymous","P82G G174L",2
"lib2","SARS-CoV-2","ACATGCACGCACCATA",3,70.54,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7L W23S S36L V71T E76Y T148F G174N",7
"lib2","SARS-CoV-2","ACATGCACGCCAATAT",3,87.92,10.71,-0.12,0.03,2.97,1.03,0,"1 nonsynonymous","P191F",1
"lib2","SARS-CoV-2","ACATGCACGGGATAAG",21,3.28,NA,NA,NA,NA,NA,NA,"stop","N120*",1
"lib2","SARS-CoV-2","ACATGCATTCTATAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","T63H W106L L122V Y143K K198*",5
"lib2","SARS-CoV-2","ACATGCATTGGTAATA",7,25.21,10.74,-0.1,0.06,2.8,1.15,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","ACATGCATTTTTTTAT",1,8.2,10.48,-0.36,0.24,1.83,1.01,0.03,">1 nonsynonymous","C6A S41A F62K I104W",4
"lib2","SARS-CoV-2","ACATGCCAAGAGACGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W G74E W106V S147Y",4
"lib2","SARS-CoV-2","ACATGCCATTTTAAAA",3,24.98,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","ACATGCCCATTCCTTA",9,143.08,8.53,-2.3,0.12,2.3,1.05,0.01,">1 nonsynonymous","Y35D Q168I",2
"lib2","SARS-CoV-2","ACATGCCTACACTCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T G86R",2
"lib2","SARS-CoV-2","ACATGCCTGATAGAAT",4,63.52,9.92,-0.91,0.06,2.8,1.08,0,">1 nonsynonymous","F62P Q176M",2
"lib2","SARS-CoV-2","ACATGCCTTCCTAATA",3,56.01,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K94V E141H Y175L V181G",4
"lib2","SARS-CoV-2","ACATGCGAACACAAAT",10,111.5,9.29,-1.54,0.06,2.68,1.08,0,">1 nonsynonymous","N1S I142R",2
"lib2","SARS-CoV-2","ACATGCGACACGAGAA",5,15.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6E A105W S129P",3
"lib2","SARS-CoV-2","ACATGCGATTATCGCA",10,70.69,10.52,-0.31,0.05,2.93,1.07,0,"1 nonsynonymous","P191I",1
"lib2","SARS-CoV-2","ACATGCGGGATGAACC",6,25.59,6,-4.84,1.63,1.5,1.14,0.04,">1 nonsynonymous","N4R A18S S45A N118S P133R",5
"lib2","SARS-CoV-2","ACATGCGGTAAAGCAC",8,185.35,10.13,-0.71,0.04,2.54,1.03,0,">1 nonsynonymous","N58P S69W",2
"lib2","SARS-CoV-2","ACATGCGTAATCCCGG",2,11.9,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N58L Y66S Y91C Y119T G155I",5
"lib2","SARS-CoV-2","ACATGCTAACAGCAAT",1,35.71,10.1,-0.73,0.05,2.98,1.07,0,">1 nonsynonymous","K48R F156K",2
"lib2","SARS-CoV-2","ACATGCTAGAATACAC",3,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y L60P Y93A D98I S164V T170R G174C",7
"lib2","SARS-CoV-2","ACATGCTATGATTTCA",2,33.78,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C61T G83L A105R C158G",4
"lib2","SARS-CoV-2","ACATGCTCATATCTTA",23,14.22,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","A14G A42I P82H G86V Y119S",5
"lib2","SARS-CoV-2","ACATGCTCCCAGGGGA",6,5.21,NA,NA,NA,NA,NA,NA,"stop","N4T A14D D59N L95*",4
"lib2","SARS-CoV-2","ACATGGAAACAAAACA",8,30.94,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49E A89R",2
"lib2","SARS-CoV-2","ACATGGAAACACGAAA",25,9.13,NA,NA,NA,NA,NA,NA,"stop","S69* G172L",2
"lib2","SARS-CoV-2","ACATGGAATACAAACC",6,50.53,10.76,-0.08,0.05,2.96,1.06,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","ACATGGAATATCGTCG",3,42.56,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","I2R G9Y V32W G101A I138E P197S",6
"lib2","SARS-CoV-2","ACATGGAATCACTGTC",7,3.01,NA,NA,NA,NA,NA,NA,"stop","V11Y C49* N58S Y91L V153A",5
"lib2","SARS-CoV-2","ACATGGAATCCCCTTA",6,87.58,6.11,-4.73,0.77,1.5,1.22,0.02,">1 nonsynonymous","N58L L95R",2
"lib2","SARS-CoV-2","ACATGGACAGAATGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","ACATGGACCATAACTG",4,2.6,NA,NA,NA,NA,NA,NA,"stop","N58V N151* G155V",3
"lib2","SARS-CoV-2","ACATGGACCGAATGAC",10,74.62,9.28,-1.56,0.07,2.04,1.09,0,">1 nonsynonymous","D90L R136V",2
"lib2","SARS-CoV-2","ACATGGAGACTCCCTT",12,141.45,10.59,-0.24,0.04,2.95,1.05,0,">1 nonsynonymous","N13G K56S",2
"lib2","SARS-CoV-2","ACATGGAGAGTGTATT",10,129.48,9.66,-1.18,0.06,2.54,1.08,0,">1 nonsynonymous","D59P K114N P149L",3
"lib2","SARS-CoV-2","ACATGGATAAATGTAG",4,22.29,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9V Y35N N64P D112I",4
"lib2","SARS-CoV-2","ACATGGATATACATTA",7,2.2,NA,NA,NA,NA,NA,NA,"stop","Y50S A105N T170*",3
"lib2","SARS-CoV-2","ACATGGCAATAATAAG",5,34.23,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D97F N107G G146E V173S T201Y",5
"lib2","SARS-CoV-2","ACATGGCATGGATCTA",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23I F99Q G155H",3
"lib2","SARS-CoV-2","ACATGGCCAACACGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18V Q84H K114* T201K",4
"lib2","SARS-CoV-2","ACATGGCCTATCCACC",6,110.57,9.69,-1.15,0.05,2.95,1.05,0,">1 nonsynonymous","K114G N130M",2
"lib2","SARS-CoV-2","ACATGGCGCCTCACGC",9,5.44,NA,NA,NA,NA,NA,NA,"stop","A14D S45V C61A T100* R127P",5
"lib2","SARS-CoV-2","ACATGGCGTTTAAAAC",5,76.17,10.88,0.04,0.05,2.91,1.11,0,"1 nonsynonymous","P197G",1
"lib2","SARS-CoV-2","ACATGGGACACTATTT",8,50.31,8.42,-2.42,0.22,1.5,1.01,0.02,">1 nonsynonymous","V37Q Y93L",2
"lib2","SARS-CoV-2","ACATGGGCATACTCAG",2,9.1,9.9,-0.94,0.22,2.43,1.1,0.01,">1 nonsynonymous","P149C Y178C",2
"lib2","SARS-CoV-2","ACATGGGGGAAAAGAA",8,29.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9Y S41W A105W D137F",4
"lib2","SARS-CoV-2","ACATGGGTCAGGAGCC",2,37.96,10.24,-0.59,0.17,2.75,1.26,0.01,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","ACATGGTCCTGTATAG",6,37.71,6,-4.84,1.55,1.5,1.06,0.01,">1 nonsynonymous","F134M G146P V173Y L187R",4
"lib2","SARS-CoV-2","ACATGGTCTATAGAAC",1,5.65,9.24,-1.6,0.1,2,1.04,0,">1 nonsynonymous","T15R P133I",2
"lib2","SARS-CoV-2","ACATGGTGGCCGATAA",1,39.9,10.91,0.08,0.06,2.98,1.03,0,"1 nonsynonymous","N130E",1
"lib2","SARS-CoV-2","ACATGGTGGGGACATC",8,669.03,7.87,-2.97,0.11,1.68,1.05,0,">1 nonsynonymous","F134H Y175K",2
"lib2","SARS-CoV-2","ACATGGTGTCTCCTCA",16,76.08,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L5I C49I N64R Y93A N118Y G155S",6
"lib2","SARS-CoV-2","ACATGGTTCTGGTAGA",6,60.58,9.07,-1.77,0.09,1.64,1.11,0,">1 nonsynonymous","G51T Y66L D90Q V173F",4
"lib2","SARS-CoV-2","ACATGGTTTGTACATT",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88D G117T",2
"lib2","SARS-CoV-2","ACATGTAAAGTTTGAG",3,78.18,8.76,-2.08,0.17,2.13,1.1,0.01,">1 nonsynonymous","D90Y G117P",2
"lib2","SARS-CoV-2","ACATGTAACTCATGTC",6,2.79,NA,NA,NA,NA,NA,NA,"stop","G9W A42* G51P C61G",4
"lib2","SARS-CoV-2","ACATGTACATACGAAA",5,33.37,10.5,-0.33,0.11,3,1.04,0,">1 nonsynonymous","S36F I138E K199H",3
"lib2","SARS-CoV-2","ACATGTACGTCCTTTT",1,10.9,9.11,-1.73,0.16,1.8,1.09,0,">1 nonsynonymous","F17I D90R A192V",3
"lib2","SARS-CoV-2","ACATGTATAACTCCAC",2,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H N92L D112K",3
"lib2","SARS-CoV-2","ACATGTATACAAGACG",10,80.96,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G51S G86I L122E",3
"lib2","SARS-CoV-2","ACATGTATTATATCGT",1,23.96,10.41,-0.43,0.09,2.8,1,0,">1 nonsynonymous","A14V T46V I138L",3
"lib2","SARS-CoV-2","ACATGTCAAGAGTCAA",1,40.7,8.78,-2.06,0.15,2.4,1.13,0.01,">1 nonsynonymous","C6L C31E S113T S164R",4
"lib2","SARS-CoV-2","ACATGTCAATATTTAG",1,6.55,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","N4T V20W I28S L60V F70N P149T",6
"lib2","SARS-CoV-2","ACATGTCATAAAAAAT",3,68.98,10.24,-0.59,0.04,2.88,1.05,0,">1 nonsynonymous","F44R F62V",2
"lib2","SARS-CoV-2","ACATGTCGAGTCGCTT",8,65.23,9.8,-1.04,0.1,2.18,1.07,0,">1 nonsynonymous","D98R E135T P149S",3
"lib2","SARS-CoV-2","ACATGTCTAAAACCAC",3,27.1,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","K128L R136E Y165M",3
"lib2","SARS-CoV-2","ACATGTCTACTGTTCG",7,45.66,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","Y93H R124K K128A K198P",4
"lib2","SARS-CoV-2","ACATGTCTTACCTAGA",3,33.01,11.11,0.28,0.06,2.88,1.11,0,">1 nonsynonymous","N4S T55D Y91F Y123K",4
"lib2","SARS-CoV-2","ACATGTCTTATCCTGA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","P7A T63* F160V",3
"lib2","SARS-CoV-2","ACATGTGAAAATGATA",10,260.75,10,-0.84,0.03,2.79,1.06,0,">1 nonsynonymous","C6L A33K T201K",3
"lib2","SARS-CoV-2","ACATGTGAACATATAT",1,14.12,8.98,-1.85,0.1,2.94,1.07,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","ACATGTGATCTCTGAG",1,5.35,10.64,-0.19,0.15,2.67,1.36,0.01,">1 nonsynonymous","T3K F44W T55S N64K",4
"lib2","SARS-CoV-2","ACATGTGCACCCTTCA",4,10.96,6,-4.84,0.52,3,1.04,0,">1 nonsynonymous","S139I N171R",2
"lib2","SARS-CoV-2","ACATGTGGAGGACATA",1,48.11,10.85,0.02,0.07,2.89,1.13,0,"1 nonsynonymous","S147Y",1
"lib2","SARS-CoV-2","ACATGTTAAACAGTAT",2,30.6,9.62,-1.21,0.06,3,1.02,0,">1 nonsynonymous","A145K S200P",2
"lib2","SARS-CoV-2","ACATGTTATAACCCTG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","G83* A89S Y119V R136L V180I",5
"lib2","SARS-CoV-2","ACATGTTATCTCTCGG",4,60.85,10.72,-0.12,0.05,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATGTTGAAGGTACC",6,128.88,9.47,-1.36,0.06,1.88,1.09,0,">1 nonsynonymous","Y35K T63C D98T T201H",4
"lib2","SARS-CoV-2","ACATGTTGACCTTAAT",18,46.38,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","D97L V103L G117P N130L",4
"lib2","SARS-CoV-2","ACATGTTGAGATTAAC",2,39.45,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G86Y Y121C K132T G146K",4
"lib2","SARS-CoV-2","ACATGTTGATGAACTG",14,103.48,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y91K C158P",2
"lib2","SARS-CoV-2","ACATGTTTAGTGAAAT",19,149.51,6.85,-3.98,0.22,1.5,1.16,0.01,">1 nonsynonymous","Y39K L162G",2
"lib2","SARS-CoV-2","ACATGTTTCACCTGCA",6,25.92,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y35A F62H F70P",3
"lib2","SARS-CoV-2","ACATGTTTTATAAATT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","G83S T201*",2
"lib2","SARS-CoV-2","ACATTAAAAAACATGA",7,62.46,10.74,-0.09,0.05,2.91,1.07,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","ACATTAAAAAGACCCG",7,25.57,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","I80A L95R",2
"lib2","SARS-CoV-2","ACATTAAAAGCACTCC",6,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57V N92K G116K P149T Y165K S200R",6
"lib2","SARS-CoV-2","ACATTAAAATTCGACA",1,31.18,10.37,-0.47,0.08,2.82,1.07,0,">1 nonsynonymous","E135K T201K",2
"lib2","SARS-CoV-2","ACATTAAACATAGCCA",6,166.07,8.63,-2.21,0.08,2.39,1.05,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","ACATTAAACATCCAAA",4,50.68,7.53,-3.3,0.26,1.5,1.06,0.02,">1 nonsynonymous","R73L K132P",2
"lib2","SARS-CoV-2","ACATTAAAGATAGCGT",4,67.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R127I Q176A",2
"lib2","SARS-CoV-2","ACATTAAATAAGATCC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P S45R G51V D98Q D137Y",5
"lib2","SARS-CoV-2","ACATTAAATTTTTCAT",3,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G L95P E141N V153F",4
"lib2","SARS-CoV-2","ACATTAACCATCATAT",2,26.18,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","K56F C102G",2
"lib2","SARS-CoV-2","ACATTAACGTCCTTCA",2,38.73,10.15,-0.69,0.11,2.64,1.13,0.01,">1 nonsynonymous","R127S T148R",2
"lib2","SARS-CoV-2","ACATTAAGACGGAGCT",1,37.33,10.23,-0.6,0.04,2.89,1.04,0,">1 nonsynonymous","P7M L122C P149S",3
"lib2","SARS-CoV-2","ACATTAAGCTTAATAG",2,34.67,10.81,-0.02,0.07,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTAAGGCAACGAC",13,1.32,NA,NA,NA,NA,NA,NA,"stop","D90* T100V G152D",3
"lib2","SARS-CoV-2","ACATTAAGTGAGGTTA",9,48.89,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","E10Q T63H D112Y P149W",4
"lib2","SARS-CoV-2","ACATTAATAACCAATA",28,365.06,10.83,-0.01,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTAATATTACGCA",3,29.49,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L60T V103N T140P Y143L",4
"lib2","SARS-CoV-2","ACATTAATGCACAACG",12,92.91,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T46I P133V R179M T201M",4
"lib2","SARS-CoV-2","ACATTAATGTACCAAG",11,82.04,8.24,-2.6,0.16,1.82,1.06,0.01,">1 nonsynonymous","A33D Y119W S164Y",3
"lib2","SARS-CoV-2","ACATTAATGTTTTAGA",5,3.39,NA,NA,NA,NA,NA,NA,"stop","T3N Y39* L122* K132F E141A R179W",6
"lib2","SARS-CoV-2","ACATTAATTATATTTA",18,6.22,NA,NA,NA,NA,NA,NA,"stop","L5F Q84S N107G S129*",4
"lib2","SARS-CoV-2","ACATTACAAGTAATTA",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S A105T",2
"lib2","SARS-CoV-2","ACATTACAATCTCGCG",5,58.91,10.79,-0.04,0.04,2.95,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ACATTACACGGAAAGG",5,59.81,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C49V V103L V153Y",3
"lib2","SARS-CoV-2","ACATTACACTAAAGGC",3,10.98,7.19,-3.65,0.36,1.5,1.15,0.02,">1 nonsynonymous","V37M V52D E135V",3
"lib2","SARS-CoV-2","ACATTACATGGCGGCA",2,0.95,NA,NA,NA,NA,NA,NA,"stop","V71K G116* F156N",3
"lib2","SARS-CoV-2","ACATTACATTGTTATC",1,109.9,10.04,-0.8,0.06,2.72,1.03,0,">1 nonsynonymous","Y35R K114S",2
"lib2","SARS-CoV-2","ACATTACCAATTTCAG",2,15.03,10.13,-0.71,0.12,2.76,1.08,0.01,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","ACATTACCACATGTAC",3,50.38,10.27,-0.57,0.02,3,1.02,0,">1 nonsynonymous","C6F V37S T63R",3
"lib2","SARS-CoV-2","ACATTACCCATTCTTA",12,161.39,9.96,-0.87,0.07,2.63,1.07,0,">1 nonsynonymous","K26D T100N T201N",3
"lib2","SARS-CoV-2","ACATTACCCGATTCGG",2,32.86,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","D59S D97A R124V",3
"lib2","SARS-CoV-2","ACATTACCCTCGGTTT",4,12.1,10.88,0.05,0.06,2.78,1.22,0,">1 nonsynonymous","N64S L122Q",2
"lib2","SARS-CoV-2","ACATTACCTACATTGC",2,30.2,8.69,-2.15,0.18,1.97,1.12,0.01,">1 nonsynonymous","A89H L125C V173D",3
"lib2","SARS-CoV-2","ACATTACGCCACAAAG",2,5.83,7.42,-3.42,0.19,2.33,1.02,0.02,">1 nonsynonymous","D34L S43N G166T",3
"lib2","SARS-CoV-2","ACATTACTTCCCGGGA",8,2.89,NA,NA,NA,NA,NA,NA,"stop","L5K T46* K132R",3
"lib2","SARS-CoV-2","ACATTAGAAGCTACAG",3,126.6,6.16,-4.68,0.62,1.5,1.2,0.01,">1 nonsynonymous","Q163L P177V",2
"lib2","SARS-CoV-2","ACATTAGACAAAGTAA",5,42.57,9.77,-1.06,0.04,2.98,1,0,"1 nonsynonymous","N118R",1
"lib2","SARS-CoV-2","ACATTAGATGTCGGCC",3,0.29,NA,NA,NA,NA,NA,NA,"stop","L60W G83D D97*",3
"lib2","SARS-CoV-2","ACATTAGATTACACTA",3,72.1,10.76,-0.08,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTAGCACCCCGTT",11,182.62,10.42,-0.42,0.04,2.89,1.05,0,">1 nonsynonymous","A14E S129V",2
"lib2","SARS-CoV-2","ACATTAGCATCTCACG",7,33.04,8.25,-2.59,0.08,2.54,1.03,0,">1 nonsynonymous","L5A F44E N58A I72L N157D",5
"lib2","SARS-CoV-2","ACATTAGCGTTAGTAA",1,7.18,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","I88A D137S",2
"lib2","SARS-CoV-2","ACATTAGGATATGTCA",1,19.16,8.29,-2.55,0.22,1.57,1.12,0.02,">1 nonsynonymous","L5S D90R W106C",3
"lib2","SARS-CoV-2","ACATTAGTCAGAAGCT",5,0,NA,NA,NA,NA,NA,NA,"stop","F62S D68L D112* A145D Q176A",5
"lib2","SARS-CoV-2","ACATTAGTCCAACAGC",6,62.91,9.41,-1.42,0.13,1.7,1.12,0.01,">1 nonsynonymous","C6P D34L C195F",3
"lib2","SARS-CoV-2","ACATTAGTTAGGCGGT",4,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H T55C G155V",3
"lib2","SARS-CoV-2","ACATTATAGCGTGTCC",5,82.46,10.46,-0.37,0.05,2.9,1.09,0,">1 nonsynonymous","K56D V115G",2
"lib2","SARS-CoV-2","ACATTATCAGTACGAA",3,67.92,10.79,-0.04,0.07,2.88,1.13,0,"1 nonsynonymous","V115A",1
"lib2","SARS-CoV-2","ACATTATCGCACTGCA",8,178.89,10.75,-0.09,0.03,2.94,1.08,0,"1 nonsynonymous","T15P",1
"lib2","SARS-CoV-2","ACATTATCTCAGAAAA",2,28.26,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","Y39G C150A Q168S T201N",4
"lib2","SARS-CoV-2","ACATTATGATTCTAAA",1,0.46,NA,NA,NA,NA,NA,NA,"stop","N4Y G9S C61* F99K",4
"lib2","SARS-CoV-2","ACATTATTCACGCGCG",2,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102T R136A",2
"lib2","SARS-CoV-2","ACATTATTCTTTTTTA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","V37* P96M N120H Q163W",4
"lib2","SARS-CoV-2","ACATTATTGCACAAAC",2,3.03,NA,NA,NA,NA,NA,NA,"stop","A14L A22* N58V I104D",4
"lib2","SARS-CoV-2","ACATTCAACAATTGAC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","N4L Y50I S108I G116M F134G T201*",6
"lib2","SARS-CoV-2","ACATTCAAGCACGCAT",5,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y S41I I104Q S139T",4
"lib2","SARS-CoV-2","ACATTCAATTACATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A22* Q84R T170F S184P",4
"lib2","SARS-CoV-2","ACATTCACAACTCTAC",2,98.54,10.82,-0.02,0.03,2.96,1.06,0,">1 nonsynonymous","I2S S129K",2
"lib2","SARS-CoV-2","ACATTCAGCAATATAA",2,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M T46R V173Y",3
"lib2","SARS-CoV-2","ACATTCAGTCTATCCA",11,5.31,NA,NA,NA,NA,NA,NA,"stop","L5M Q79* L95G R124K Q176E",5
"lib2","SARS-CoV-2","ACATTCAGTCTCAACG",17,214.81,7.45,-3.39,0.12,1.8,1.13,0.01,">1 nonsynonymous","Q144I Y175C",2
"lib2","SARS-CoV-2","ACATTCATAAAATCTA",5,34.95,9.47,-1.37,0.16,2.05,1.1,0.01,">1 nonsynonymous","N13L F62G",2
"lib2","SARS-CoV-2","ACATTCATGGGGGAAT",1,69.07,10.49,-0.34,0.05,2.78,1.19,0,"1 nonsynonymous","G155T",1
"lib2","SARS-CoV-2","ACATTCCCCGTCGATA",2,58.76,10.83,-0.01,0.04,2.93,1.09,0,">1 nonsynonymous","V37G D59T",2
"lib2","SARS-CoV-2","ACATTCCCGATGAACC",6,84.36,9.55,-1.29,0.15,1.82,1.02,0.01,">1 nonsynonymous","F8S A33R S41N T140K L187V",5
"lib2","SARS-CoV-2","ACATTCCCGTAAATCC",2,10.41,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A42V G51Y V77M",3
"lib2","SARS-CoV-2","ACATTCCTTTGCATCC",6,86.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61S K87S Y165S",3
"lib2","SARS-CoV-2","ACATTCGAATCAAATA",1,63.93,10.36,-0.47,0.05,2.81,1.09,0,">1 nonsynonymous","D97K R136T N171M",3
"lib2","SARS-CoV-2","ACATTCGATCCTAAAC",22,161.57,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S41Q V77G C102I L131V L187P",5
"lib2","SARS-CoV-2","ACATTCGGCCTCTGAT",11,1.06,NA,NA,NA,NA,NA,NA,"stop","C6I K56* V103Y K114R R136T",5
"lib2","SARS-CoV-2","ACATTCGGTTTCCTCC",11,2.21,NA,NA,NA,NA,NA,NA,"stop","T140* Y175*",2
"lib2","SARS-CoV-2","ACATTCGTGGAAGTTC",6,125.76,9.18,-1.65,0.08,1.69,1.1,0,">1 nonsynonymous","L95C N120L",2
"lib2","SARS-CoV-2","ACATTCGTTTCAGATG",11,308.13,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y39K D68T A89F G101S R127D E141S",6
"lib2","SARS-CoV-2","ACATTCTAATAATTTA",1,22.75,10.91,0.08,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTCTCAGGAGTAG",3,68.71,10.74,-0.1,0.07,2.85,1.11,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","ACATTCTGCTAATACA",9,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80E P149F T170Y",3
"lib2","SARS-CoV-2","ACATTGAACCAAATAC",10,113.92,8.64,-2.19,0.18,1.5,1.1,0.01,">1 nonsynonymous","Y35R N40K A105F",3
"lib2","SARS-CoV-2","ACATTGAACCGAAGGC",4,72.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D137A Y175T P197V",3
"lib2","SARS-CoV-2","ACATTGAACTCTTAAC",2,52.53,9.56,-1.28,0.05,1.95,1.06,0,">1 nonsynonymous","N4V V77Q",2
"lib2","SARS-CoV-2","ACATTGACTACCAAAA",1,5.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63V F99K C158T",3
"lib2","SARS-CoV-2","ACATTGACTGGTTGGG",8,65.45,9.49,-1.35,0.06,1.88,1.07,0,">1 nonsynonymous","F8Q S129V S200K",3
"lib2","SARS-CoV-2","ACATTGAGGAAGACCT",5,36.93,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3S S69W L95C W106T P149T T201W",6
"lib2","SARS-CoV-2","ACATTGAGTTCGCTAC",3,99.45,8.16,-2.68,0.16,1.82,1.01,0.01,">1 nonsynonymous","F17L Y119D",2
"lib2","SARS-CoV-2","ACATTGAGTTTAACCA",5,114.48,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N24L G83S I88K F167N",4
"lib2","SARS-CoV-2","ACATTGATATACCCAA",10,302.14,10.44,-0.39,0.04,2.97,1.03,0,"1 nonsynonymous","G174P",1
"lib2","SARS-CoV-2","ACATTGATGCACCGGT",8,90.98,6.03,-4.8,1.2,1.5,1.2,0.02,">1 nonsynonymous","D97S N109L T148R Y165N",4
"lib2","SARS-CoV-2","ACATTGCAAACAATCT",8,140.3,10.19,-0.64,0.04,2.92,1.05,0,">1 nonsynonymous","V37L E154I",2
"lib2","SARS-CoV-2","ACATTGCAGAGATGCA",3,4.7,NA,NA,NA,NA,NA,NA,"stop","Q84M D90* Y143S",3
"lib2","SARS-CoV-2","ACATTGCAGATTCAAC",2,18.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1F A89L Q163S",3
"lib2","SARS-CoV-2","ACATTGCCCACTGCAA",8,0.53,NA,NA,NA,NA,NA,NA,"stop","C49I K56*",2
"lib2","SARS-CoV-2","ACATTGCCGTAAACCG",5,107.95,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A14D N24L D97F R127H V173L",5
"lib2","SARS-CoV-2","ACATTGCGAACGATAG",4,21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T63P R127L S139D",3
"lib2","SARS-CoV-2","ACATTGCGTTCACAAA",1,10.09,6.8,-4.04,0.31,1.59,1.08,0.01,">1 nonsynonymous","R16Y F62G P82D L122Y R136C",5
"lib2","SARS-CoV-2","ACATTGCTCAAACAAG",6,132.25,10.79,-0.04,0.03,2.9,1.1,0,"1 nonsynonymous","D75K",1
"lib2","SARS-CoV-2","ACATTGCTGTTCGTGC",6,3.32,NA,NA,NA,NA,NA,NA,"stop","N40* K114H",2
"lib2","SARS-CoV-2","ACATTGGAAAGCCTGA",1,8.96,8.52,-2.31,0.15,2.09,1.05,0.01,">1 nonsynonymous","T3V R16T K56H D90F Q144R Q168E T201G",7
"lib2","SARS-CoV-2","ACATTGGAAGCCCATT",13,349.89,8.43,-2.41,0.09,2.35,1.08,0,">1 nonsynonymous","F44S G155P",2
"lib2","SARS-CoV-2","ACATTGGACACGATGT",2,43.42,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N40I G83Y C158G",3
"lib2","SARS-CoV-2","ACATTGGTGACTGCAG",3,24.25,6,-4.84,1.39,1.5,1.21,0.03,">1 nonsynonymous","V32G Y50I L60I",3
"lib2","SARS-CoV-2","ACATTGTACTGCCTCA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","I72R K128L Y143*",3
"lib2","SARS-CoV-2","ACATTGTATTGAACAC",3,93.62,10.44,-0.39,0.05,2.96,1.02,0,"1 nonsynonymous","D34C",1
"lib2","SARS-CoV-2","ACATTGTTAAATAAAG",2,11.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35E R78L Q168I T201D",4
"lib2","SARS-CoV-2","ACATTGTTGCAAAAAC",21,134.29,8.52,-2.32,0.19,1.5,1.05,0.01,">1 nonsynonymous","P54R A89L",2
"lib2","SARS-CoV-2","ACATTTAAACTATGAT",1,40.13,10.78,-0.06,0.03,3,1,0,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","ACATTTAACGAGAACT",1,1.67,NA,NA,NA,NA,NA,NA,"stop","S41H R73M N107V Y119T F126A Y143* P149V",7
"lib2","SARS-CoV-2","ACATTTAACGCCAACA",1,1.19,NA,NA,NA,NA,NA,NA,"stop","F12C F44Q Q84* E141G N171D",5
"lib2","SARS-CoV-2","ACATTTAACTACACAG",2,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R I88T R127S N157S",4
"lib2","SARS-CoV-2","ACATTTAAGAATATAA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","F8T Y93W G146* T170M R179E",5
"lib2","SARS-CoV-2","ACATTTAAGTTTAGTT",5,78.14,10.87,0.03,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTTACACGGCATA",1,17.7,8.37,-2.47,0.11,2.26,1.03,0.01,">1 nonsynonymous","P7I Y119E G174Q",3
"lib2","SARS-CoV-2","ACATTTACATAACGAA",12,129.24,9.82,-1.01,0.05,2.07,1.05,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","ACATTTACCCATAGAG",3,31.57,10.78,-0.06,0.07,3,1.02,0,">1 nonsynonymous","S36N S41M",2
"lib2","SARS-CoV-2","ACATTTACCTTTTTAT",2,6.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P L95A",2
"lib2","SARS-CoV-2","ACATTTACGACCAAAC",6,2.85,NA,NA,NA,NA,NA,NA,"stop","K48V Y50* T170N",3
"lib2","SARS-CoV-2","ACATTTACTAAGTTCA",2,20.28,6.11,-4.73,1.32,1.5,1.21,0.04,">1 nonsynonymous","C6F F17L K128C V181W",4
"lib2","SARS-CoV-2","ACATTTACTAGGATAC",3,23.21,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","W106V K114A D137Q",3
"lib2","SARS-CoV-2","ACATTTAGATGACAAA",6,93.95,9.73,-1.1,0.09,2.22,1.11,0,">1 nonsynonymous","V52T Y121N",2
"lib2","SARS-CoV-2","ACATTTAGCAAAGCCT",13,240.02,10.23,-0.6,0.04,2.75,1.02,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","ACATTTAGTAAATACG",15,167.61,9.25,-1.59,0.06,1.81,1.1,0,">1 nonsynonymous","V37M A105L T201L",3
"lib2","SARS-CoV-2","ACATTTATAACTGTCT",4,27.34,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V103C C150R",2
"lib2","SARS-CoV-2","ACATTTATACTCTCAT",5,98.2,8.47,-2.37,0.1,2.74,1.1,0,">1 nonsynonymous","N120S F126G K199Q",3
"lib2","SARS-CoV-2","ACATTTATAGACCCAA",6,37.52,8.66,-2.17,0.1,1.72,1.08,0.01,">1 nonsynonymous","C6L A33V T46N I138R",4
"lib2","SARS-CoV-2","ACATTTATATAAGAAA",1,7.92,6,-4.84,2,1.5,1.11,0.06,"1 nonsynonymous","I88G",1
"lib2","SARS-CoV-2","ACATTTATTCATCTAT",6,64.61,10.88,0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTTATTTTGACAG",7,89.59,10.13,-0.71,0.06,2.83,1.06,0,">1 nonsynonymous","D90Y T148G",2
"lib2","SARS-CoV-2","ACATTTCAAGGAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66* T100F N120L",3
"lib2","SARS-CoV-2","ACATTTCACCCAGCAA",1,5.7,8.62,-2.22,0.23,1.72,1.32,0.02,">1 nonsynonymous","A89M K114H",2
"lib2","SARS-CoV-2","ACATTTCAGCTAATGA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","T15N N24F G101W S129Q Y165* T201I",6
"lib2","SARS-CoV-2","ACATTTCATGGCATCG",2,36.41,10.42,-0.42,0.04,2.96,1.07,0,"1 nonsynonymous","K87I",1
"lib2","SARS-CoV-2","ACATTTCCAACGAGAA",2,13.49,10.24,-0.59,0.06,3,1.03,0,">1 nonsynonymous","L60R L122D",2
"lib2","SARS-CoV-2","ACATTTCCATCACACA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","D90* P177K",2
"lib2","SARS-CoV-2","ACATTTCCGTTTAACC",3,140.22,10.88,0.05,0.06,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTTCCTAGACCAG",1,48.14,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V77R L95K",2
"lib2","SARS-CoV-2","ACATTTCGGAGTCTAA",1,26.24,10.86,0.02,0.09,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACATTTCTCCCTACAA",6,273.3,9.94,-0.89,0.08,2.32,1.03,0,">1 nonsynonymous","A42F P149S Y178L",3
"lib2","SARS-CoV-2","ACATTTGAAAACACTC",2,51.68,10.88,0.05,0.04,2.94,1.07,0,">1 nonsynonymous","G9I N120E N130K",3
"lib2","SARS-CoV-2","ACATTTGACCAAAATG",4,1.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","ACATTTGGGAACTCGT",1,3.3,NA,NA,NA,NA,NA,NA,"stop","S19V Y35* T63E G196W",4
"lib2","SARS-CoV-2","ACATTTGTAATGCCCC",12,74.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39S L131E T140M V153N",4
"lib2","SARS-CoV-2","ACATTTGTCCGTCCAA",13,1.11,NA,NA,NA,NA,NA,NA,"stop","G117A G166*",2
"lib2","SARS-CoV-2","ACATTTGTGTGGTAAC",7,110.91,8.64,-2.2,0.12,2.21,1.05,0,">1 nonsynonymous","N4Y T55S D90Y F126I",4
"lib2","SARS-CoV-2","ACATTTTACCAAGCGG",4,50.86,9.45,-1.39,0.12,1.92,1.06,0,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","ACATTTTACTCTATTT",14,158.96,10.72,-0.12,0.02,3,1.01,0,"1 nonsynonymous","S129M",1
"lib2","SARS-CoV-2","ACATTTTACTTGATAG",3,0.66,NA,NA,NA,NA,NA,NA,"stop","A42S G86R I142*",3
"lib2","SARS-CoV-2","ACATTTTAGAAGGGAG",1,20.66,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","C6F Y66S P96G P149Q G155M Y165R",6
"lib2","SARS-CoV-2","ACATTTTAGACTGACA",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M G86L",2
"lib2","SARS-CoV-2","ACATTTTCAAATCAAC",3,51.44,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6M P161C",2
"lib2","SARS-CoV-2","ACATTTTCTGCCCCGA",3,40.23,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","R25E G83V",2
"lib2","SARS-CoV-2","ACATTTTGCTCAGAAG",8,0.43,NA,NA,NA,NA,NA,NA,"stop","N4* A14* P82*",3
"lib2","SARS-CoV-2","ACATTTTGTCATTATC",5,45.56,8.39,-2.45,0.19,1.83,1.06,0.01,">1 nonsynonymous","W106F G117F K198Y",3
"lib2","SARS-CoV-2","ACATTTTTACGTGGGG",8,2.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","ACATTTTTCCATACTA",1,21.34,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8D P82F A105N A145T",4
"lib2","SARS-CoV-2","ACATTTTTGGCCAACA",4,76.85,10.45,-0.39,0.04,2.88,1.04,0,">1 nonsynonymous","S139Y P197R",2
"lib2","SARS-CoV-2","ACATTTTTTCAACTCG",2,38.99,9.93,-0.91,0.09,2.66,1,0,">1 nonsynonymous","E10M L57F",2
"lib2","SARS-CoV-2","ACATTTTTTTAGAGGT",6,1.96,NA,NA,NA,NA,NA,NA,"stop","N1S Y93* V182R",3
"lib2","SARS-CoV-2","ACCAAAAAAAATTATA",8,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105T E154N",2
"lib2","SARS-CoV-2","ACCAAAAAAATAGTCA",1,32.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S45E D59I T85N E154V Y175L",5
"lib2","SARS-CoV-2","ACCAAAAAACAGCCAT",3,155.54,10.85,0.01,0.04,2.95,1.03,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","ACCAAAAAATCTTAAA",8,71.23,9.25,-1.59,0.06,1.92,1.11,0,">1 nonsynonymous","C61H T85L W106Y T140E K199V",5
"lib2","SARS-CoV-2","ACCAAAAAATTTAAAC",2,24.48,10.98,0.14,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAAAACTACTGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W K94E R127S",3
"lib2","SARS-CoV-2","ACCAAAAACTTATTAG",1,28.98,8.85,-1.99,0.08,1.82,1.05,0,">1 nonsynonymous","F12Y V37K N120C S200F",4
"lib2","SARS-CoV-2","ACCAAAAAGAGTTAGG",4,19.76,10.72,-0.12,0.11,2.98,1.02,0,">1 nonsynonymous","T55R A105T Q163A",3
"lib2","SARS-CoV-2","ACCAAAAATATGGTCT",8,47.82,6.38,-4.46,0.51,1.5,1.21,0.01,">1 nonsynonymous","A89F Y143R P149E",3
"lib2","SARS-CoV-2","ACCAAAACAAAGCAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107A Y175G",2
"lib2","SARS-CoV-2","ACCAAAACCGATTCGG",1,31.78,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I28Q Q84K A89L Y119A",4
"lib2","SARS-CoV-2","ACCAAAACCGTATAAA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C A81K F134V V153W",4
"lib2","SARS-CoV-2","ACCAAAACCTAACGGA",9,135.23,10.85,0.02,0.05,2.92,1.09,0,">1 nonsynonymous","I2E Y35L",2
"lib2","SARS-CoV-2","ACCAAAAGAAAGTTAG",2,37.72,6.64,-4.19,0.16,1.5,1.06,0,">1 nonsynonymous","I2H C158L",2
"lib2","SARS-CoV-2","ACCAAAAGGCTAACGA",2,50.62,7.85,-2.99,0.2,1.51,1.12,0.02,">1 nonsynonymous","G9L R73T T100E L187I",4
"lib2","SARS-CoV-2","ACCAAAAGTCAACGTC",8,143.07,9.75,-1.08,0.06,2.15,1.03,0,">1 nonsynonymous","S29D F44L P133S",3
"lib2","SARS-CoV-2","ACCAAAATAAAAATGG",8,229.05,8.5,-2.33,0.1,2.98,1.1,0,">1 nonsynonymous","G9S N157R",2
"lib2","SARS-CoV-2","ACCAAAATACCTGAAA",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ACCAAAATAGCAAGTG",1,17.57,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N92C Y119V F126V T148H",4
"lib2","SARS-CoV-2","ACCAAAATATTAGGTA",2,26.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82V A89C A105P",3
"lib2","SARS-CoV-2","ACCAAAATATTTTAAA",15,237.5,8,-2.83,0.11,2.27,1.09,0,">1 nonsynonymous","N4S Y175K",2
"lib2","SARS-CoV-2","ACCAAAATCCACCATG",4,24.45,6,-4.84,1.39,3,1.21,0.01,">1 nonsynonymous","A14Y Y21R L57E D98F",4
"lib2","SARS-CoV-2","ACCAAAATCCATTGGG",6,100.26,10.37,-0.46,0.05,2.94,1.04,0,">1 nonsynonymous","S43C F47I",2
"lib2","SARS-CoV-2","ACCAAAATCTTTAAGC",2,40.09,9.33,-1.5,0.15,1.84,1.12,0.01,">1 nonsynonymous","S45N L60S A81S E154N",4
"lib2","SARS-CoV-2","ACCAAACAAAGCAAGT",19,277.58,10.83,-0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAACAACACGAAC",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L R127S G146Q P149L",4
"lib2","SARS-CoV-2","ACCAAACAACCTCGAA",11,1.12,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib2","SARS-CoV-2","ACCAAACAACGGATAG",4,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T A105W L162M",3
"lib2","SARS-CoV-2","ACCAAACAATCCTATA",4,48.55,6.27,-4.57,0.94,1.5,1.22,0.04,">1 nonsynonymous","C6I Y50R K94T R136I I142M",5
"lib2","SARS-CoV-2","ACCAAACACAGTGCAC",3,25.79,10.48,-0.35,0.12,2.77,1.14,0.01,"1 nonsynonymous","A14I",1
"lib2","SARS-CoV-2","ACCAAACAGCTACAGA",3,70.27,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6Q E141I P177N",3
"lib2","SARS-CoV-2","ACCAAACAGCTGCCTA",4,41.18,10.73,-0.1,0.06,2.8,1.22,0,">1 nonsynonymous","S36T V173D",2
"lib2","SARS-CoV-2","ACCAAACAGTAGGGTG",2,18.25,10.84,0.01,0.06,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCAAACATGACCCAA",24,213.41,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56S F99T V153T T170L",4
"lib2","SARS-CoV-2","ACCAAACATTACTTCT",2,24.6,6.34,-4.5,0.26,3,1.17,0,">1 nonsynonymous","P7Y E141S Q176L",3
"lib2","SARS-CoV-2","ACCAAACATTAGAGTA",7,32.71,9.91,-0.93,0.08,2.1,1,0,">1 nonsynonymous","C102Y L122Q T201L",3
"lib2","SARS-CoV-2","ACCAAACCAACGTAAA",9,123.37,9.84,-1,0.07,2.22,1.02,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","ACCAAACCTCACTAAC",3,27.39,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19L S29C F99P",3
"lib2","SARS-CoV-2","ACCAAACCTTAGTCAT",7,97.98,10.16,-0.67,0.07,2.61,1,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","ACCAAACGAAAAATAA",6,116.44,10.18,-0.65,0.06,2.76,1.05,0,">1 nonsynonymous","A18T K26T V37Y D98R",4
"lib2","SARS-CoV-2","ACCAAACGAAACATTC",9,263.58,10.2,-0.64,0.03,2.94,1.03,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","ACCAAACGGGCAACGG",1,33.13,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","G117R F126I C158L",3
"lib2","SARS-CoV-2","ACCAAACTACGCTCTG",2,23.58,10.76,-0.07,0.08,2.88,1.09,0,"1 nonsynonymous","A42I",1
"lib2","SARS-CoV-2","ACCAAACTATTTGAAT",1,14.41,10.34,-0.5,0.24,2.48,1.14,0.02,"1 nonsynonymous","E135S",1
"lib2","SARS-CoV-2","ACCAAACTCCAATAGC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C6* T15N S36* I72S C150A",5
"lib2","SARS-CoV-2","ACCAAACTGTCTCACG",7,56.67,7.02,-3.81,0.49,1.5,1.13,0.05,">1 nonsynonymous","K56N D112M G146R",3
"lib2","SARS-CoV-2","ACCAAACTTAAAATCC",4,29.57,10.76,-0.07,0.1,2.93,1.11,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","ACCAAAGAAAGATTCT",4,66.44,9.71,-1.12,0.06,2.65,1,0,">1 nonsynonymous","G9S S147P Q176R",3
"lib2","SARS-CoV-2","ACCAAAGAAGTAATGT",5,10.53,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F99I C102S",2
"lib2","SARS-CoV-2","ACCAAAGACCGAAACT",2,101.17,10.87,0.03,0.08,2.9,1.04,0,">1 nonsynonymous","T55E N120R I138L",3
"lib2","SARS-CoV-2","ACCAAAGAGGGAACAC",11,24.75,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","I2P E10A S43T V71K N110K C158L T170P",7
"lib2","SARS-CoV-2","ACCAAAGATACTTATT",1,6.93,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L5A V173N K198S",3
"lib2","SARS-CoV-2","ACCAAAGCACACTAAA",15,1.92,NA,NA,NA,NA,NA,NA,"stop","T55C Y66K G146*",3
"lib2","SARS-CoV-2","ACCAAAGCGCTATTCG",3,13.96,10.55,-0.29,0.1,2.79,1.05,0,">1 nonsynonymous","T15Y I138V",2
"lib2","SARS-CoV-2","ACCAAAGGAAACAGGA",3,7.44,6.09,-4.75,1.92,1.5,1.22,0.07,">1 nonsynonymous","K94P P149S S200G",3
"lib2","SARS-CoV-2","ACCAAAGGATGAAGGG",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C K56T C102K K114N",4
"lib2","SARS-CoV-2","ACCAAAGGTCATACGG",2,89.2,10.15,-0.69,0.05,2.81,1.01,0,"1 nonsynonymous","R136Y",1
"lib2","SARS-CoV-2","ACCAAAGGTTGCATAT",6,126.89,10.84,0.01,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAAGTATATCGTC",1,10.33,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","N13S G51F I104C N151C",4
"lib2","SARS-CoV-2","ACCAAAGTATATGCGA",8,43.98,6,-4.84,1.11,1.5,1.08,0.01,">1 nonsynonymous","D68G Y119A Q144R N151T",4
"lib2","SARS-CoV-2","ACCAAAGTATTGACAT",4,42.74,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","F12P Y21W Q84P",3
"lib2","SARS-CoV-2","ACCAAAGTCGCGAACT",4,8.64,6,-4.84,2,1.5,1.42,0.06,">1 nonsynonymous","A33D I104L E135A G174T",4
"lib2","SARS-CoV-2","ACCAAAGTGAACCTTT",4,20.69,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","L60H G146Y G166T V180Q A190W",5
"lib2","SARS-CoV-2","ACCAAATACAAGAGAG",3,52.85,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S19L Q176F A192P K198N",4
"lib2","SARS-CoV-2","ACCAAATACTCCAGGA",3,20.69,6,-4.84,1.48,1.5,1.07,0.01,">1 nonsynonymous","F8N T63W D68C K132M S164D",5
"lib2","SARS-CoV-2","ACCAAATACTGCATGT",4,23.89,7.63,-3.2,0.21,1.5,1.05,0.01,">1 nonsynonymous","V32R S41W G146L",3
"lib2","SARS-CoV-2","ACCAAATATAAATTAA",3,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62A C102S L122W C158S",4
"lib2","SARS-CoV-2","ACCAAATATAAGGAGG",13,8.42,NA,NA,NA,NA,NA,NA,"stop","C6S S43I E76* K87P C158G",5
"lib2","SARS-CoV-2","ACCAAATATACGTAAA",2,174.46,10.46,-0.38,0.03,3,1.01,0,"1 nonsynonymous","F12M",1
"lib2","SARS-CoV-2","ACCAAATCAAATTACA",10,90.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A42T G86E A105N",3
"lib2","SARS-CoV-2","ACCAAATGAATCCATT",3,120.82,10.78,-0.06,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAATGCTTCTTCA",3,19.84,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","G83P G146V Y165C",3
"lib2","SARS-CoV-2","ACCAAATGTATGATGT",12,107.28,6.26,-4.58,0.8,1.5,1.26,0.03,"1 nonsynonymous","V182L",1
"lib2","SARS-CoV-2","ACCAAATTAAAATATA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C N107C",2
"lib2","SARS-CoV-2","ACCAAATTATTTGGTT",1,12.77,7.13,-3.71,0.38,1.53,1.18,0.05,">1 nonsynonymous","N92Y V103S Y119A",3
"lib2","SARS-CoV-2","ACCAAATTCTAGACGA",2,29.79,10.89,0.05,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAATTGACACAAC",2,27.24,8.45,-2.39,0.17,1.91,1.02,0.01,">1 nonsynonymous","E10I A33G G146K",3
"lib2","SARS-CoV-2","ACCAAATTTTACCATG",17,179.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S69G G166D R179S",3
"lib2","SARS-CoV-2","ACCAACAAAAGAATAT",9,119.32,10.21,-0.62,0.04,2.89,1.05,0,">1 nonsynonymous","S53W F160L",2
"lib2","SARS-CoV-2","ACCAACAAGGAACCCA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L C102P",2
"lib2","SARS-CoV-2","ACCAACAATACAATCT",7,41.01,8.31,-2.53,0.13,2.21,1.06,0.01,">1 nonsynonymous","Y91K A145F",2
"lib2","SARS-CoV-2","ACCAACAATGACCTAC",4,41.92,6,-4.84,1.19,1.5,1.13,0.02,">1 nonsynonymous","F17S R27Q S139I G155V R179K S200H",6
"lib2","SARS-CoV-2","ACCAACACATATCTTA",11,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S F70R K94I C102W Y121S",5
"lib2","SARS-CoV-2","ACCAACACTACGTAAC",19,175.36,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y21N N40S L57K Y121T Q144T",5
"lib2","SARS-CoV-2","ACCAACAGTACCAAAG",1,11.92,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","Y66R R179A",2
"lib2","SARS-CoV-2","ACCAACAGTTTCAACA",1,36.29,9.84,-0.99,0.09,2.89,1,0,">1 nonsynonymous","R16H T148I P149T G155M",4
"lib2","SARS-CoV-2","ACCAACATCGCCTCAG",3,27.16,10.71,-0.13,0.06,2.97,1,0,">1 nonsynonymous","L5T L60T S147A",3
"lib2","SARS-CoV-2","ACCAACATCTGCTGAC",2,65.4,10.7,-0.13,0.03,2.92,1.09,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","ACCAACATTAGAAAAA",2,13.75,10.56,-0.27,0.06,3,1.01,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","ACCAACATTGGCAAGA",11,48.69,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A14I Y91R N107H",3
"lib2","SARS-CoV-2","ACCAACCAGCAACAGC",11,0,NA,NA,NA,NA,NA,NA,"stop","T3P K87M G101* K128V",4
"lib2","SARS-CoV-2","ACCAACCATTGGAATA",1,3.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161H",1
"lib2","SARS-CoV-2","ACCAACCCCACGCACC",1,80.51,8.37,-2.46,0.28,1.5,1,0.03,"1 nonsynonymous","R179S",1
"lib2","SARS-CoV-2","ACCAACCGAGTCAAAA",5,23.26,6.24,-4.59,1,1.5,1.12,0.05,">1 nonsynonymous","E10P C49G T55Y P82L K87N R127I",6
"lib2","SARS-CoV-2","ACCAACCTAAGAGAGT",3,89.28,10.85,0.01,0.05,2.96,1.07,0,"1 nonsynonymous","F62Y",1
"lib2","SARS-CoV-2","ACCAACCTGACTGACA",1,22.76,8.78,-2.05,0.22,2.12,1.14,0.03,">1 nonsynonymous","K56Q R73A K128E E135V",4
"lib2","SARS-CoV-2","ACCAACCTGTACTTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","N58Q D98C A105* L162K",4
"lib2","SARS-CoV-2","ACCAACCTTAAGCCTA",9,4.7,NA,NA,NA,NA,NA,NA,"stop","L95R Y143*",2
"lib2","SARS-CoV-2","ACCAACCTTAGTACAA",5,37.42,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N4G Y35R T63C G172S",4
"lib2","SARS-CoV-2","ACCAACGATACTGAAG",4,46.99,10.67,-0.17,0.03,2.88,1.13,0,"1 nonsynonymous","R78V",1
"lib2","SARS-CoV-2","ACCAACGATCTACAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K56L D98Y I104K",4
"lib2","SARS-CoV-2","ACCAACGCGAACATAG",1,3.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","ACCAACGGTACTTAAC",3,78.51,10.88,0.04,0.05,2.9,1.11,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","ACCAACGGTGTAGTAC",13,5.72,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6W N40V G86H D112V N118I V173P",6
"lib2","SARS-CoV-2","ACCAACGTCCTATAAC",2,20.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V52N N107H",2
"lib2","SARS-CoV-2","ACCAACTAACATACAG",2,0.41,NA,NA,NA,NA,NA,NA,"stop","F12C G116H V182* K199M",4
"lib2","SARS-CoV-2","ACCAACTACAATCACT",3,9.2,9.79,-1.04,0.25,1.72,1.13,0.03,">1 nonsynonymous","A33I K94A R136V",3
"lib2","SARS-CoV-2","ACCAACTAGCCAAGAG",2,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N N40I G83C I88G",4
"lib2","SARS-CoV-2","ACCAACTCAATAAAAC",4,76.92,10.7,-0.14,0.05,2.91,1.09,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","ACCAACTCGACAGTAA",6,72.91,10.35,-0.48,0.05,2.87,1.06,0,"1 nonsynonymous","A18W",1
"lib2","SARS-CoV-2","ACCAAGAAACTAGATG",12,199.94,10.67,-0.16,0.02,2.9,1.1,0,">1 nonsynonymous","T55H G155A",2
"lib2","SARS-CoV-2","ACCAAGAACCGTAATT",1,42.91,10.27,-0.57,0.07,2.9,1.03,0,">1 nonsynonymous","G9R E141L",2
"lib2","SARS-CoV-2","ACCAAGAACTACTAGG",5,38.6,9.67,-1.17,0.11,2,1.02,0,">1 nonsynonymous","C49Y T63S",2
"lib2","SARS-CoV-2","ACCAAGAATGAGGCTA",6,35.19,9.13,-1.71,0.16,1.5,1.12,0.01,">1 nonsynonymous","S43C F99V",2
"lib2","SARS-CoV-2","ACCAAGAATTAATAAA",8,98.59,8.73,-2.1,0.24,1.5,1,0.02,">1 nonsynonymous","L5Q E10L A89R",3
"lib2","SARS-CoV-2","ACCAAGACATATCATG",6,12.09,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N13G S53L Q79G F99V T148I",5
"lib2","SARS-CoV-2","ACCAAGAGGCCCATGG",18,127.19,7.93,-2.9,0.19,1.5,1.11,0.01,">1 nonsynonymous","N4R F62V A81L T148P",4
"lib2","SARS-CoV-2","ACCAAGAGGCGTTAGA",4,26.89,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K48F F99S F126R",3
"lib2","SARS-CoV-2","ACCAAGAGTGATCCCG",1,12.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F17G R136C",2
"lib2","SARS-CoV-2","ACCAAGATACCACAAA",16,128.86,8.39,-2.45,0.1,2.16,1.1,0,">1 nonsynonymous","Y35N C61L N120T",3
"lib2","SARS-CoV-2","ACCAAGATAGGGAAGG",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38V S69L D75Y V103P T140L",5
"lib2","SARS-CoV-2","ACCAAGCCAAAAATCC",1,23.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85R D137W P197H",3
"lib2","SARS-CoV-2","ACCAAGCCCAAAATCT",3,7.18,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","D112I G166P",2
"lib2","SARS-CoV-2","ACCAAGCCGACGCGTG",3,63.16,10.64,-0.2,0.06,2.89,1.11,0,"1 nonsynonymous","S129W",1
"lib2","SARS-CoV-2","ACCAAGCCTCCTAAAA",4,1.42,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","ACCAAGGAACAGCAAT",4,6.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N24T I80K A105Y",3
"lib2","SARS-CoV-2","ACCAAGGACACACTAC",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q D137Y G166S",3
"lib2","SARS-CoV-2","ACCAAGGAGAACCAAA",6,60.41,9.28,-1.55,0.12,1.63,1.08,0.01,">1 nonsynonymous","R27G R127H",2
"lib2","SARS-CoV-2","ACCAAGGATACGGCGG",3,0,NA,NA,NA,NA,NA,NA,"stop","F8* D59K S129C",3
"lib2","SARS-CoV-2","ACCAAGGCCATGGAAT",1,10.39,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","A33S G86K E135G S164F",4
"lib2","SARS-CoV-2","ACCAAGGCCGAGTGAC",1,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A G101V N120M",3
"lib2","SARS-CoV-2","ACCAAGGCGTCCGCAA",18,231.03,10.55,-0.29,0.03,2.92,1.07,0,">1 nonsynonymous","Q84T Y143H",2
"lib2","SARS-CoV-2","ACCAAGGCGTCCTAAA",4,9.14,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A42L L57Y A89V R127V V181R",5
"lib2","SARS-CoV-2","ACCAAGGGATGTTCTA",2,67.06,10.8,-0.04,0.05,2.91,1.11,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","ACCAAGGTAAATTTGC",3,79.09,9.45,-1.38,0.07,2.25,1.12,0,">1 nonsynonymous","K26R I88C N151H S164Y P197Y",5
"lib2","SARS-CoV-2","ACCAAGGTTATATGAC",1,11.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S53A L95P",2
"lib2","SARS-CoV-2","ACCAAGTAAGGCTTAC",8,199.43,10.85,0.01,0.05,2.88,1.09,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","ACCAAGTACAGTAATT",5,8.7,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3R G9R G83P W106R",4
"lib2","SARS-CoV-2","ACCAAGTATGTCCAAT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","F12* G86T L125G Y143F",4
"lib2","SARS-CoV-2","ACCAAGTCGAAGCTAC",2,3.52,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","ACCAAGTGGAAGGTAT",8,72.81,8.49,-2.35,0.08,1.76,1.07,0,">1 nonsynonymous","L5H Y39R Y66M I72M K87M",5
"lib2","SARS-CoV-2","ACCAAGTTAACACCTT",13,131.57,9.93,-0.91,0.08,2.11,1.08,0,">1 nonsynonymous","N1Q G51C",2
"lib2","SARS-CoV-2","ACCAAGTTAGACGAAT",4,50.01,10.81,-0.03,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAAGTTCACTAATT",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62G L131S R179N",3
"lib2","SARS-CoV-2","ACCAATAAAAACGAAA",3,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96G D112V",2
"lib2","SARS-CoV-2","ACCAATAAACAGAAAG",21,176.27,9.51,-1.33,0.04,2.41,1.05,0,">1 nonsynonymous","F44P Y121F F126L",3
"lib2","SARS-CoV-2","ACCAATAAACGATTAT",20,220.9,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Q84L Y143N P149C",3
"lib2","SARS-CoV-2","ACCAATAAACTTCGAC",9,40.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E141Y Y165S V181R",3
"lib2","SARS-CoV-2","ACCAATAAGATTTAGC",27,219.8,6.37,-4.47,0.3,1.5,1.14,0.01,">1 nonsynonymous","T3E G83S C158S",3
"lib2","SARS-CoV-2","ACCAATAATTCCTCCG",1,25.09,10.63,-0.21,0.03,2.82,1.2,0,"1 nonsynonymous","H189C",1
"lib2","SARS-CoV-2","ACCAATAGAAGCGCAA",9,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K A14S F99D",3
"lib2","SARS-CoV-2","ACCAATAGCTATATCC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Y35* S129C T140R G155M",4
"lib2","SARS-CoV-2","ACCAATAGTCCTCGCT",11,27.23,10.7,-0.14,0.03,2.99,1,0,">1 nonsynonymous","T100I F134A",2
"lib2","SARS-CoV-2","ACCAATATAAGGTAGC",7,10.42,10.14,-0.7,0.38,1.5,1,0.08,">1 nonsynonymous","D59W N107V",2
"lib2","SARS-CoV-2","ACCAATATACTAGAAA",13,133.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19E K87R Y119R Q176S",4
"lib2","SARS-CoV-2","ACCAATATATGAATTC",2,0.07,NA,NA,NA,NA,NA,NA,"stop","N4K L5V A89*",3
"lib2","SARS-CoV-2","ACCAATATCCACCGCT",2,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S T3K P96I T100V Y119M L131A",6
"lib2","SARS-CoV-2","ACCAATATGACGAAAA",9,150.04,9.87,-0.97,0.06,2.27,1,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","ACCAATATGAGACTAT",7,47.93,9.71,-1.13,0.27,1.5,1.02,0.02,"1 nonsynonymous","F17K",1
"lib2","SARS-CoV-2","ACCAATATTCACGTGC",8,258.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y91S N151T F167T",3
"lib2","SARS-CoV-2","ACCAATCAATGCCAAT",1,7.33,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","C6R S43L G83V Y119M",4
"lib2","SARS-CoV-2","ACCAATCGAATGCTGT",10,213.39,10.64,-0.2,0.03,2.94,1.06,0,">1 nonsynonymous","I104M T148R V153S",3
"lib2","SARS-CoV-2","ACCAATCGAGTATTTC",10,1.49,NA,NA,NA,NA,NA,NA,"stop","V20M S29G R78C E135* T148R",5
"lib2","SARS-CoV-2","ACCAATCGGCGAAGTT",5,18.21,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P82V F99H F185H",3
"lib2","SARS-CoV-2","ACCAATCGGCGTTTTT",7,104.48,10.69,-0.15,0.02,2.95,1.05,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","ACCAATCGGTTGACAT",2,47.07,10.65,-0.18,0.11,2.86,1,0,"1 nonsynonymous","G9I",1
"lib2","SARS-CoV-2","ACCAATCTTATAATGC",5,119.54,10.51,-0.33,0.06,2.83,1.07,0,">1 nonsynonymous","S129W A192T",2
"lib2","SARS-CoV-2","ACCAATGAAAGAGGTA",6,101.59,10.75,-0.09,0.03,3,1.01,0,"1 nonsynonymous","N58H",1
"lib2","SARS-CoV-2","ACCAATGAACTGCTAT",7,59.1,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Q84L F99A W106T T201A",4
"lib2","SARS-CoV-2","ACCAATGAATGAATAG",1,8.1,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N24A A33Q G101N C150R",4
"lib2","SARS-CoV-2","ACCAATGACATTAAAC",9,73.75,10.72,-0.12,0.02,2.97,1.03,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","ACCAATGACTAATTTG",6,40.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","R25D C150D",2
"lib2","SARS-CoV-2","ACCAATGATATCGCGG",4,31.31,9.35,-1.49,0.19,1.72,1.09,0.02,">1 nonsynonymous","I88C Y123K",2
"lib2","SARS-CoV-2","ACCAATGATGCACGTA",1,25.35,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C61T L95T R124S F156I",4
"lib2","SARS-CoV-2","ACCAATGATGCGGGGT",2,14.23,10.78,-0.05,0.03,3,1,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","ACCAATGATTAGAGAA",7,62.35,9.59,-1.24,0.07,2.85,1.08,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","ACCAATGCCTGGCTGA",1,24.67,9.69,-1.15,0.05,2.91,1.07,0,"1 nonsynonymous","Y143I",1
"lib2","SARS-CoV-2","ACCAATGCGCAGAACG",14,153.96,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y35S D137Y Y175G",3
"lib2","SARS-CoV-2","ACCAATGGAACGTATT",4,105.63,10.82,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAATGGAAGGAATG",10,82.85,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C102L Y123T L131F",3
"lib2","SARS-CoV-2","ACCAATGGAATTAATT",2,24.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2R F8R G83D",3
"lib2","SARS-CoV-2","ACCAATGGGTTTACAT",4,86.63,9.78,-1.06,0.04,2.9,1.11,0,">1 nonsynonymous","L125S P149V",2
"lib2","SARS-CoV-2","ACCAATGTCCATTTTC",2,30.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53K E76R F126M E141N G155V",5
"lib2","SARS-CoV-2","ACCAATGTCCGACGGA",3,71.98,10.74,-0.1,0.05,2.95,1.07,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","ACCAATTAAACGGCAA",9,127.31,10.29,-0.55,0.05,2.84,1.1,0,">1 nonsynonymous","F62L Q144F Q168H",3
"lib2","SARS-CoV-2","ACCAATTAAATACAAC",5,63.76,6.11,-4.73,0.66,1.5,1.14,0.01,">1 nonsynonymous","F8N K26P V52A P96L Y119K I142S S184V",7
"lib2","SARS-CoV-2","ACCAATTAACCACGCG",8,144.6,10.9,0.06,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAATTAACCGAAGT",11,43.24,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","L95T V103S W106M P149I",4
"lib2","SARS-CoV-2","ACCAATTAGCTAATGC",2,28.71,10.76,-0.08,0.06,2.87,1.13,0,">1 nonsynonymous","T3G S36L K48R K128R P197A",5
"lib2","SARS-CoV-2","ACCAATTAGTCGCAAA",2,5.99,8.63,-2.21,0.31,1.84,1.13,0.02,">1 nonsynonymous","L60S P96C",2
"lib2","SARS-CoV-2","ACCAATTATAACTCAG",2,8.87,9.58,-1.25,0.13,1.75,1.21,0.01,">1 nonsynonymous","W106C N151E",2
"lib2","SARS-CoV-2","ACCAATTCCTGAAACT",2,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R D90C V103L",3
"lib2","SARS-CoV-2","ACCAATTCGCCTTCAT",4,0,NA,NA,NA,NA,NA,NA,"stop","G9M L38* G152A",3
"lib2","SARS-CoV-2","ACCAATTCTCTATAGG",2,14.06,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6S F99R",2
"lib2","SARS-CoV-2","ACCAATTTACCTCTAC",1,12.55,6.12,-4.72,1.03,1.5,1.08,0.04,">1 nonsynonymous","A33S L95Y Q168T K199M",4
"lib2","SARS-CoV-2","ACCAATTTCAAAAAGT",3,46.01,10.77,-0.07,0.04,2.95,1.03,0,">1 nonsynonymous","P7G A42C I104C L122K",4
"lib2","SARS-CoV-2","ACCAATTTCCATAACT",6,84.48,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F8W W106E G155I",3
"lib2","SARS-CoV-2","ACCACAAAACAAATGA",6,201.13,10.01,-0.83,0.04,2.66,1.03,0,">1 nonsynonymous","T3C F134R V153S",3
"lib2","SARS-CoV-2","ACCACAAAAGCGGAAT",4,27.63,10.81,-0.02,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCACAAAGGAACGGG",3,16.47,8.22,-2.62,0.24,1.5,1.13,0.03,">1 nonsynonymous","L5N L57F R127H",3
"lib2","SARS-CoV-2","ACCACAACAGGTATAA",13,110.64,10.89,0.05,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCACAACCTGCCAAA",3,10.89,7.57,-3.27,0.32,1.5,1.21,0.04,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","ACCACAAGAAGCTCAC",5,56.79,10.74,-0.1,0.05,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCACAAGTACGCTAA",10,77.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1P V77Y G86V P133V Q168F",5
"lib2","SARS-CoV-2","ACCACAATAAAGGAAA",2,46.18,9.44,-1.4,0.06,2.93,1.09,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","ACCACAATATACACGG",4,44.21,10.7,-0.13,0.06,2.96,1,0,">1 nonsynonymous","N4Q E186G",2
"lib2","SARS-CoV-2","ACCACAATTAATGTAG",11,216.3,8.55,-2.29,0.09,2.63,1.04,0,">1 nonsynonymous","N1R N118D S129P G174K",4
"lib2","SARS-CoV-2","ACCACACAAAAGAAAC",17,130.98,10.63,-0.21,0.03,2.93,1.08,0,"1 nonsynonymous","N30R",1
"lib2","SARS-CoV-2","ACCACACAAACATAGA",14,131.35,6,-4.84,2,1.5,1.15,0,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","ACCACACACGGATGGT",6,0.6,NA,NA,NA,NA,NA,NA,"stop","C49S K87*",2
"lib2","SARS-CoV-2","ACCACACAGTATTCTG",13,267.33,10.84,0,0.03,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCACACATTAAGGTA",3,39.39,10.42,-0.42,0.05,2.98,1.04,0,"1 nonsynonymous","N58C",1
"lib2","SARS-CoV-2","ACCACACCACACTCTG",6,1.52,NA,NA,NA,NA,NA,NA,"stop","T100* N120C E141K L187I",4
"lib2","SARS-CoV-2","ACCACACCACTACATC",4,146.09,8.26,-2.57,0.12,2.54,1.04,0.01,">1 nonsynonymous","R136H N157K V173R L188A",4
"lib2","SARS-CoV-2","ACCACACCGGAAAAAA",4,153.09,10.86,0.02,0.04,2.83,1.17,0,"1 nonsynonymous","T148R",1
"lib2","SARS-CoV-2","ACCACACGTCTTAATC",1,28.96,8.63,-2.21,0.07,3,1.04,0,">1 nonsynonymous","Y91F G166Y",2
"lib2","SARS-CoV-2","ACCACACTCGGGTAAG",2,26.49,7.5,-3.33,0.18,1.5,1.03,0.02,">1 nonsynonymous","Y121I P133Y F160Y P169F",4
"lib2","SARS-CoV-2","ACCACACTCTTCACTT",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N N130A S200T",3
"lib2","SARS-CoV-2","ACCACAGAAAACGCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y121* S129G D137N",3
"lib2","SARS-CoV-2","ACCACAGAACACTTTA",1,14.27,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C158L V180Y",2
"lib2","SARS-CoV-2","ACCACAGAAGATTTGT",2,55.45,8.45,-2.39,0.11,2.94,1.08,0.01,">1 nonsynonymous","T3S Y175M",2
"lib2","SARS-CoV-2","ACCACAGAATATCACA",1,40.58,8.73,-2.11,0.12,2.15,1.06,0.01,">1 nonsynonymous","N4M C61V Q176S",3
"lib2","SARS-CoV-2","ACCACAGCACGGACAA",23,509.21,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I88V Y165V P177M",3
"lib2","SARS-CoV-2","ACCACAGCTAAAGTTA",2,5.27,NA,NA,NA,NA,NA,NA,"stop","R25V V32E G86* F99L Y123V",5
"lib2","SARS-CoV-2","ACCACAGCTAGTGACC",5,98.49,8.64,-2.2,0.11,1.95,1.09,0,">1 nonsynonymous","D112L E141K",2
"lib2","SARS-CoV-2","ACCACAGCTGAGAAAA",2,6.32,6,-4.84,2,1.5,1,0,">1 nonsynonymous","T55C C61F I88Q Y119M S139G",5
"lib2","SARS-CoV-2","ACCACAGGACCTTATC",7,104.73,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N4W S36C A105T G117S K128H E154P Q176F",7
"lib2","SARS-CoV-2","ACCACAGGAGATCCGT",4,16.24,9.9,-0.94,0.11,2.66,1,0.01,">1 nonsynonymous","V65W T201G",2
"lib2","SARS-CoV-2","ACCACAGGGCAACGAA",3,45.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y39S G101N W106C Y121F Y143N",5
"lib2","SARS-CoV-2","ACCACAGGGCATTTAG",4,51.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T55V Q84L K128D N151S C158R",5
"lib2","SARS-CoV-2","ACCACAGTTACAACTT",10,209.46,10.85,0.01,0.04,2.91,1.1,0,">1 nonsynonymous","Y35F N120S",2
"lib2","SARS-CoV-2","ACCACATAAAGCTGGC",8,292.1,9.02,-1.82,0.03,2.9,1.07,0,">1 nonsynonymous","S43I F126Q F160A",3
"lib2","SARS-CoV-2","ACCACATAAATGGATC",4,86.68,8.45,-2.38,0.12,2.6,1.06,0.01,">1 nonsynonymous","P7S K87A G117Y E154V",4
"lib2","SARS-CoV-2","ACCACATACCTACTAT",4,36.39,10.84,0,0.06,2.95,1.08,0,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","ACCACATAGGGTTTGT",9,0.18,NA,NA,NA,NA,NA,NA,"stop","G9T S41L A67S T85A S113R Y123*",6
"lib2","SARS-CoV-2","ACCACATCTATCCCCG",6,13.36,6.18,-4.65,2,3,1.1,0,">1 nonsynonymous","D34R A89E F156L",3
"lib2","SARS-CoV-2","ACCACATGACAAGGTT",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E F47S N118V P197V",4
"lib2","SARS-CoV-2","ACCACATGACCAGTGT",4,65.03,6.07,-4.76,0.94,1.5,1.21,0.01,">1 nonsynonymous","F12L D137L",2
"lib2","SARS-CoV-2","ACCACATGTGCACTTG",2,2.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","ACCACATTAATGACGC",3,12.55,7.97,-2.87,0.46,1.5,1,0.06,">1 nonsynonymous","I28L T46P D59V V115I",4
"lib2","SARS-CoV-2","ACCACCAAACATCACA",4,110.91,8.94,-1.9,0.06,2.89,1.02,0,">1 nonsynonymous","Y121S G174K K199R",3
"lib2","SARS-CoV-2","ACCACCAACAATGGAA",2,38.21,9.86,-0.98,0.11,2.02,1.06,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","ACCACCAACCGGTTGG",9,143.05,10.18,-0.66,0.03,2.95,1.03,0,">1 nonsynonymous","G9W S164L",2
"lib2","SARS-CoV-2","ACCACCAACGGGATTA",5,56.72,9.95,-0.89,0.09,2.39,1.06,0,">1 nonsynonymous","K48F D90S T201Q",3
"lib2","SARS-CoV-2","ACCACCACTACTCCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* Y93I C102R",3
"lib2","SARS-CoV-2","ACCACCACTAGTTGTT",1,24.59,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","Y21S P54A V103E N130E N151F C158V",6
"lib2","SARS-CoV-2","ACCACCACTCACACCA",1,21.35,10.49,-0.35,0.12,2.86,1,0.01,">1 nonsynonymous","Y39E N120L",2
"lib2","SARS-CoV-2","ACCACCACTCACTTTC",6,75.48,10.85,0.01,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCACCAGAATAATGA",8,54.89,8.48,-2.36,0.2,1.5,1.06,0.01,">1 nonsynonymous","F44E D90L K114C P149L",4
"lib2","SARS-CoV-2","ACCACCATCGTCACCG",1,44.16,10.49,-0.34,0.08,2.9,1.07,0,">1 nonsynonymous","K26M T100S",2
"lib2","SARS-CoV-2","ACCACCATGTAATTGG",11,136.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y66C K128S C158K",3
"lib2","SARS-CoV-2","ACCACCATTAAATAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","L5* V37S G83N K128H",4
"lib2","SARS-CoV-2","ACCACCCAGCGGATTG",1,1.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L125D",1
"lib2","SARS-CoV-2","ACCACCCATCAGACAA",4,1.32,NA,NA,NA,NA,NA,NA,"stop","I72* D97A Y119L",3
"lib2","SARS-CoV-2","ACCACCCCATACAACA",8,1.98,NA,NA,NA,NA,NA,NA,"stop","V77M N92V Y123* K128L",4
"lib2","SARS-CoV-2","ACCACCCCATCTAAAC",4,193.81,6.26,-4.58,0.18,1.72,1.13,0,">1 nonsynonymous","P177V A192V",2
"lib2","SARS-CoV-2","ACCACCCGATAAACTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L V11D",2
"lib2","SARS-CoV-2","ACCACCCTAAAAGCCG",3,92.83,10.62,-0.22,0.04,2.89,1.1,0,">1 nonsynonymous","P7N A33Y T55N",3
"lib2","SARS-CoV-2","ACCACCCTAAAAGGAA",5,66.64,9.36,-1.48,0.11,1.79,1.07,0.01,">1 nonsynonymous","V77A D98S",2
"lib2","SARS-CoV-2","ACCACCCTCGATAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","D75L P82*",2
"lib2","SARS-CoV-2","ACCACCCTCGCAACCG",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S R25W",2
"lib2","SARS-CoV-2","ACCACCCTTAACATAC",6,115.13,10.63,-0.21,0.04,2.89,1.09,0,"1 nonsynonymous","G116E",1
"lib2","SARS-CoV-2","ACCACCGACCGTATAT",3,68.53,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T46F L122R P161F Y175W T201N",5
"lib2","SARS-CoV-2","ACCACCGAGATTAAGG",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E P96V Y119L K132F",4
"lib2","SARS-CoV-2","ACCACCGCAACGCTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V F44S L60V",3
"lib2","SARS-CoV-2","ACCACCGGCGCATACG",2,14.48,9.17,-1.67,0.18,2.74,1.1,0.01,">1 nonsynonymous","C6G Y39Q P169Y P197T",4
"lib2","SARS-CoV-2","ACCACCTAATTATGCA",6,0.27,NA,NA,NA,NA,NA,NA,"stop","T85* S139L P169R T201S",4
"lib2","SARS-CoV-2","ACCACCTACAATCTGA",3,53.54,6,-4.84,2,2.3,1.11,0,">1 nonsynonymous","S36F L95Q",2
"lib2","SARS-CoV-2","ACCACCTCAACTACAT",4,49.79,10.84,0,0.04,2.96,1.06,0,"1 nonsynonymous","T46V",1
"lib2","SARS-CoV-2","ACCACCTCCAATCCGA",3,40.47,6.3,-4.54,1.13,1.5,1.29,0.06,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","ACCACCTGACCAAACA",2,13.86,9.95,-0.89,0.15,2.35,1,0.01,">1 nonsynonymous","C61K E135V E141S",3
"lib2","SARS-CoV-2","ACCACCTGCGAGGAAG",2,31.21,10.57,-0.26,0.04,2.84,1.19,0,">1 nonsynonymous","S36N D90L",2
"lib2","SARS-CoV-2","ACCACGAAAAAAATTG",6,137.41,10.1,-0.73,0.05,2.81,1.06,0,">1 nonsynonymous","E10R L60S",2
"lib2","SARS-CoV-2","ACCACGAACCCAACAT",5,32.76,9.14,-1.7,0.12,2.81,1.16,0.01,"1 nonsynonymous","A145Y",1
"lib2","SARS-CoV-2","ACCACGAACGCTTGCG",11,69.43,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N4P L162P",2
"lib2","SARS-CoV-2","ACCACGACAATGTCTC",2,18.88,10.05,-0.78,0.1,2.67,1,0,">1 nonsynonymous","A14G L60G",2
"lib2","SARS-CoV-2","ACCACGAGGAACAAAG",6,1.26,NA,NA,NA,NA,NA,NA,"stop","F44L G86R F99D G117A L122*",5
"lib2","SARS-CoV-2","ACCACGATTTAACTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S V52P C61L Y93S",4
"lib2","SARS-CoV-2","ACCACGCAACATAAAG",5,69.42,9.15,-1.68,0.18,1.5,1.01,0.01,">1 nonsynonymous","Y35S G51V P197S",3
"lib2","SARS-CoV-2","ACCACGCGGAAAACCC",5,15.57,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","ACCACGCGGGATGAAG",2,53.17,10.62,-0.22,0.03,2.99,1,0,">1 nonsynonymous","T3S V37M S43Y N151V",4
"lib2","SARS-CoV-2","ACCACGGAGAAAATCT",16,364.6,10.81,-0.03,0.04,2.96,1.06,0,">1 nonsynonymous","L60M S139G T201M",3
"lib2","SARS-CoV-2","ACCACGGCAAGGGCGA",1,23.67,10.74,-0.1,0.05,3,1.02,0,">1 nonsynonymous","A22M P54S",2
"lib2","SARS-CoV-2","ACCACGGCATCTTGCG",3,12.48,8.97,-1.86,0.47,2.28,1.09,0.07,">1 nonsynonymous","S36Y S41M R124S F156R R179K S200C",6
"lib2","SARS-CoV-2","ACCACGGCTCTCTCAG",6,42.46,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F134A P149F T170V S200D",4
"lib2","SARS-CoV-2","ACCACGGGCCAACGGC",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A Y50V A105G Y123V T170V T201N",6
"lib2","SARS-CoV-2","ACCACGGGTTACTTAT",9,162.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73Q A81M G86E V103E K114R A145S Q163S G172C Y178T",9
"lib2","SARS-CoV-2","ACCACGGTAAGCTAAA",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M P54Y L95S P133S A190E",5
"lib2","SARS-CoV-2","ACCACGGTCCAAAGGT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N13H F44V E135* G146T",4
"lib2","SARS-CoV-2","ACCACGGTGAAACTTA",2,33.75,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C49W R136P",2
"lib2","SARS-CoV-2","ACCACGGTTTTCTTTA",6,7.71,6.3,-4.53,0.62,3,1.19,0.01,">1 nonsynonymous","C6R F99T I104T K128Q",4
"lib2","SARS-CoV-2","ACCACGTACTGAGATT",12,73.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C49L A89Y A105T V194I",4
"lib2","SARS-CoV-2","ACCACGTATAAAACCA",5,104.44,10.53,-0.31,0.05,2.91,1.07,0,">1 nonsynonymous","L122G G152L",2
"lib2","SARS-CoV-2","ACCACGTGTATTTCAA",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D P96N D97Y V103F",4
"lib2","SARS-CoV-2","ACCACTAACTTACAAA",7,139.56,10.35,-0.48,0.04,2.98,1.05,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","ACCACTAATATTAAAA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T85* Y165K",2
"lib2","SARS-CoV-2","ACCACTAATCCTAGCC",3,22.73,8.34,-2.49,0.2,1.63,1.09,0.02,">1 nonsynonymous","S29C W106F G174I",3
"lib2","SARS-CoV-2","ACCACTAATCGGATAG",2,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R F160W",2
"lib2","SARS-CoV-2","ACCACTAATGACTCCC",9,104.92,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28V G83V Y121K",3
"lib2","SARS-CoV-2","ACCACTACCAACAACC",7,11.59,6.59,-4.25,0.78,1.61,1.19,0.06,">1 nonsynonymous","F62C Q84W V103G A105S D112E P197A",6
"lib2","SARS-CoV-2","ACCACTACCAAGCCGC",2,30.1,6.49,-4.34,0.43,1.5,1.12,0.02,">1 nonsynonymous","V32P S41A P82I",3
"lib2","SARS-CoV-2","ACCACTACGAATAAAA",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97C S113K",2
"lib2","SARS-CoV-2","ACCACTATAACTAACG",11,93.19,9.54,-1.29,0.09,1.88,1.07,0,">1 nonsynonymous","Y50C F160Y P197E",3
"lib2","SARS-CoV-2","ACCACTATAGAAAATG",3,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99D A105T",2
"lib2","SARS-CoV-2","ACCACTATCAAGTTTA",1,13.38,8.87,-1.96,0.26,1.55,1.11,0.03,">1 nonsynonymous","C6Y K26V F185S",3
"lib2","SARS-CoV-2","ACCACTATCCTATTGT",4,11.97,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6I Y91S K128L P133T",4
"lib2","SARS-CoV-2","ACCACTATCTATAAAA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","Y21N Y39* G86D L95P Y123P T140M F156*",7
"lib2","SARS-CoV-2","ACCACTATTGAGTGTT",13,1.66,NA,NA,NA,NA,NA,NA,"stop","T3Q G9W G101N Q176*",4
"lib2","SARS-CoV-2","ACCACTCAAAATATGA",12,120.54,10.86,0.03,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCACTCAGACCAAGG",4,64.08,10.73,-0.1,0.05,2.96,1.07,0,">1 nonsynonymous","S43I N64R",2
"lib2","SARS-CoV-2","ACCACTCATCGTCACT",6,155.88,10.61,-0.22,0.03,2.88,1.12,0,">1 nonsynonymous","N64K T85M S129E",3
"lib2","SARS-CoV-2","ACCACTCCAAGCATAC",10,133.6,10.79,-0.05,0.03,2.87,1.13,0,">1 nonsynonymous","N110K N151A",2
"lib2","SARS-CoV-2","ACCACTCCCAACAGAG",3,9.23,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","G86F N157C",2
"lib2","SARS-CoV-2","ACCACTCCCCAAGTAG",2,48.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I72R E141S",2
"lib2","SARS-CoV-2","ACCACTCGACAGGAGA",4,22.27,9.78,-1.05,0.09,2.06,1.02,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","ACCACTCTAAAGTTCC",12,100.7,10.16,-0.67,0.04,2.85,1.05,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","ACCACTCTAGCCTTTT",16,183.25,10.38,-0.45,0.02,2.92,1.07,0,">1 nonsynonymous","Y121L T148I",2
"lib2","SARS-CoV-2","ACCACTCTTCCGCGAG",9,185.25,10.45,-0.39,0.04,2.89,1.06,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","ACCACTGAGAATCTTG",7,189.18,10.81,-0.02,0.04,2.92,1.1,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","ACCACTGAGTCACTAA",1,15.79,9.4,-1.43,0.11,1.9,1.11,0.01,">1 nonsynonymous","G9V V37K D90V",3
"lib2","SARS-CoV-2","ACCACTGAGTGTGTAG",6,100.8,8.4,-2.43,0.13,2.5,1.02,0.01,">1 nonsynonymous","Q84K Y143S",2
"lib2","SARS-CoV-2","ACCACTGCTGGTTAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y Y39L P96T",3
"lib2","SARS-CoV-2","ACCACTGTATGTTCGT",8,198.94,8.85,-1.99,0.11,1.9,1.09,0.01,">1 nonsynonymous","L5R Y21F Q176K",3
"lib2","SARS-CoV-2","ACCACTGTCCATGAGT",3,49.45,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S19R I28E S53T K128L N151D V181Y",6
"lib2","SARS-CoV-2","ACCACTTAAATCTGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V P133S",2
"lib2","SARS-CoV-2","ACCACTTACACTGAGT",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D98S L131Y",3
"lib2","SARS-CoV-2","ACCACTTACGCTCAAT",3,130.15,9.1,-1.74,0.07,2.92,1.08,0,"1 nonsynonymous","F156D",1
"lib2","SARS-CoV-2","ACCACTTACGTCAAAC",1,64.73,8.2,-2.64,0.18,1.78,1.18,0.01,">1 nonsynonymous","K94A Y119T E154Y T201W",4
"lib2","SARS-CoV-2","ACCACTTACTTACAAC",7,149.35,10.76,-0.08,0.05,2.91,1.12,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","ACCACTTCAGAGTTCT",1,22.98,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A81L F167R L187R",3
"lib2","SARS-CoV-2","ACCACTTCCGGCTCAA",3,34.23,7.4,-3.43,0.44,1.5,1.1,0.06,">1 nonsynonymous","P82Y G174L",2
"lib2","SARS-CoV-2","ACCACTTCTACCAACT",6,50,6,-4.84,1.84,1.5,1.19,0.02,">1 nonsynonymous","F12N G83C S184F",3
"lib2","SARS-CoV-2","ACCACTTTAAGATTCT",8,35.95,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","T3E N40L G86K W106S R127S",5
"lib2","SARS-CoV-2","ACCAGAAAGACTATTA",5,32.51,10.33,-0.51,0.06,2.87,1.06,0,"1 nonsynonymous","A67T",1
"lib2","SARS-CoV-2","ACCAGAAATCTAAAAG",17,1.38,NA,NA,NA,NA,NA,NA,"stop","R78F A105E Y123*",3
"lib2","SARS-CoV-2","ACCAGAACAAGACAAC",1,16.56,10.35,-0.48,0.07,3,1.05,0,">1 nonsynonymous","F62W E154C",2
"lib2","SARS-CoV-2","ACCAGAACAGAGCGCT",1,19.94,10.48,-0.36,0.08,2.92,1.04,0,">1 nonsynonymous","P96S N120R",2
"lib2","SARS-CoV-2","ACCAGAACTGAATAAT",6,33.6,6.91,-3.93,0.29,1.5,1.05,0.02,">1 nonsynonymous","C6L A42L K48R R136E",4
"lib2","SARS-CoV-2","ACCAGAATAACATTCA",1,10.23,8.64,-2.2,0.35,1.79,1.03,0.06,">1 nonsynonymous","A14K L60R F156I T170K",4
"lib2","SARS-CoV-2","ACCAGAATAACTCCAA",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P P82L P197A T201I",4
"lib2","SARS-CoV-2","ACCAGAATAGACCCGA",19,190.27,6.19,-4.64,0.44,1.5,1.16,0.01,">1 nonsynonymous","L38N Y119W S184F",3
"lib2","SARS-CoV-2","ACCAGAATTAACCGTA",2,67.27,9.69,-1.14,0.11,2,1.11,0.01,">1 nonsynonymous","G9T D97L Y178R",3
"lib2","SARS-CoV-2","ACCAGACAAAAAACCG",4,15.54,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T15A L131W",2
"lib2","SARS-CoV-2","ACCAGACCACTAGTAT",7,0.03,NA,NA,NA,NA,NA,NA,"stop","V11R P96L E186*",3
"lib2","SARS-CoV-2","ACCAGACCATTGAGAG",2,107.24,10.82,-0.01,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAGACGCGCTGCTT",3,7.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F70C S147H S200I",3
"lib2","SARS-CoV-2","ACCAGAGAATTACCAT",22,215.77,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","Y93G",1
"lib2","SARS-CoV-2","ACCAGAGTTTACAAAC",14,139.02,10.98,0.14,0.05,2.94,1.07,0,">1 nonsynonymous","N171V L188W",2
"lib2","SARS-CoV-2","ACCAGATGACTAGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","R16*",1
"lib2","SARS-CoV-2","ACCAGATTAAAGGATT",5,45.76,10.79,-0.05,0.07,2.94,1.08,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","ACCAGATTAGCTAAAG",1,11.38,6,-4.84,2,3,1.05,0,">1 nonsynonymous","N92F I138S Y178R",3
"lib2","SARS-CoV-2","ACCAGATTCACCAAGG",1,51.92,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V52I S113R Q168K",3
"lib2","SARS-CoV-2","ACCAGATTCCCAACCA",5,44.06,6.17,-4.66,0.79,1.5,1.1,0.02,">1 nonsynonymous","Y35L D112Y P161S",3
"lib2","SARS-CoV-2","ACCAGCAAAACGTTGA",1,27.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10L S43V F99S",3
"lib2","SARS-CoV-2","ACCAGCAAAGTCCGAA",4,34.25,8.75,-2.09,0.14,1.81,1.06,0.01,">1 nonsynonymous","V11F T85L D98H I104V",4
"lib2","SARS-CoV-2","ACCAGCAACCGTTTAA",2,35.56,8.57,-2.27,0.12,1.78,1.13,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","ACCAGCAGCGCTCAAA",6,130.7,10.42,-0.41,0.04,2.93,1.06,0,">1 nonsynonymous","E10S K128A S184I",3
"lib2","SARS-CoV-2","ACCAGCAGTCAATCTG",10,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110V P169Q",2
"lib2","SARS-CoV-2","ACCAGCATGTTACGGG",6,240.6,10.34,-0.5,0.03,2.84,1.08,0,">1 nonsynonymous","N4K K48Y",2
"lib2","SARS-CoV-2","ACCAGCCAATTCAATA",5,99.1,10.78,-0.06,0.05,2.96,1.06,0,"1 nonsynonymous","T3I",1
"lib2","SARS-CoV-2","ACCAGCCACTAAAGTG",3,45.39,9.69,-1.14,0.06,2.13,1.01,0,">1 nonsynonymous","A89Y K198Q",2
"lib2","SARS-CoV-2","ACCAGCCAGAACAGAA",8,46.18,9.42,-1.42,0.07,1.91,1.05,0,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","ACCAGCCAGCAACTCA",1,20.26,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","K87S N107T K114N P177A",4
"lib2","SARS-CoV-2","ACCAGCCCGTACAATC",2,48.67,10.7,-0.14,0.07,2.82,1.13,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","ACCAGCCCTCTAAATA",14,72.06,9.76,-1.07,0.08,2.01,1,0,">1 nonsynonymous","E10V F47M P54M D90N S129A Q144E",6
"lib2","SARS-CoV-2","ACCAGCCGAACACCAC",14,338.03,10.13,-0.7,0.05,2.97,1.02,0,">1 nonsynonymous","N58P D97V Q168N",3
"lib2","SARS-CoV-2","ACCAGCGACTCGGTCT",5,62.5,6,-4.84,2,1.58,1.13,0.01,">1 nonsynonymous","L95D E154Y",2
"lib2","SARS-CoV-2","ACCAGCGATCGTCCGA",5,74.52,10.7,-0.14,0.05,2.94,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAGCGCGATCCATT",1,33.47,8.46,-2.38,0.18,1.5,1,0.01,">1 nonsynonymous","L60P D90V T201Q",3
"lib2","SARS-CoV-2","ACCAGCGCTCAAAAGC",5,20.02,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N24R S69G V103E R127C V180P",5
"lib2","SARS-CoV-2","ACCAGCGGTGATGCTA",1,59.4,10.74,-0.09,0.04,3,1.02,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ACCAGCGTAACTCGAG",16,290.43,10.13,-0.7,0.01,2.94,1.06,0,">1 nonsynonymous","N40S A145M G196R",3
"lib2","SARS-CoV-2","ACCAGCTCCATTAACT",5,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18V C61L S69K Y123T S184F",5
"lib2","SARS-CoV-2","ACCAGCTGGCGATTCC",1,20.32,10.21,-0.63,0.09,2.87,1,0,">1 nonsynonymous","F44S L60Q",2
"lib2","SARS-CoV-2","ACCAGCTTCACACATC",10,48.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A81T I88N D112W",3
"lib2","SARS-CoV-2","ACCAGCTTGGGCCACA",6,225.6,6.62,-4.22,0.26,1.5,1.12,0.01,">1 nonsynonymous","L60P K114M Q176S",3
"lib2","SARS-CoV-2","ACCAGGAAAAGTATGT",10,106.73,10.72,-0.11,0.02,2.94,1.06,0,">1 nonsynonymous","G9K T55S",2
"lib2","SARS-CoV-2","ACCAGGAATCCAATTC",12,37.61,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y39H T55N S69L P133F E186L",5
"lib2","SARS-CoV-2","ACCAGGATCATTTTAA",6,122.12,8.8,-2.03,0.06,2.77,1.11,0,">1 nonsynonymous","L5H S53V D98Y Y159F",4
"lib2","SARS-CoV-2","ACCAGGATCCCAATCC",5,52.2,10.69,-0.14,0.03,2.95,1.05,0,">1 nonsynonymous","S41R L111Q N130I",3
"lib2","SARS-CoV-2","ACCAGGATTTATCACA",3,33.12,NA,NA,NA,NA,NA,NA,"stop","G9D G86E K132F P177* A192*",5
"lib2","SARS-CoV-2","ACCAGGCATGCGCCTA",7,31.93,8.26,-2.58,0.31,1.5,1.14,0.03,">1 nonsynonymous","T3F V77R T85M F156T",4
"lib2","SARS-CoV-2","ACCAGGGAAGAATGAT",3,41.69,9.06,-1.78,0.1,1.94,1.11,0,">1 nonsynonymous","C61F A89H",2
"lib2","SARS-CoV-2","ACCAGGGATCGATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P F167L",2
"lib2","SARS-CoV-2","ACCAGGGTGCCTTGGA",5,50.68,10.53,-0.31,0.07,2.97,1.04,0,">1 nonsynonymous","K128S Q144D",2
"lib2","SARS-CoV-2","ACCAGGTACCCACAAA",3,14.86,6.01,-4.83,1.63,1.5,1.12,0.05,">1 nonsynonymous","L5P T63R G101C H189F",4
"lib2","SARS-CoV-2","ACCAGGTATCCCGAAC",3,83.14,10.12,-0.72,0.06,2.63,1.02,0,"1 nonsynonymous","W106Q",1
"lib2","SARS-CoV-2","ACCAGGTCTGAACTAA",1,8.29,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44P F62H A89P F167G",4
"lib2","SARS-CoV-2","ACCAGGTGAATATTTC",2,15.8,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F47N D68P",2
"lib2","SARS-CoV-2","ACCAGGTTTAAAACAA",4,46.36,10.7,-0.13,0.07,2.84,1.12,0,">1 nonsynonymous","I2R A89S",2
"lib2","SARS-CoV-2","ACCAGTAAAACCACTT",2,0,NA,NA,NA,NA,NA,NA,"stop","F8* K56* S147I N157Q",4
"lib2","SARS-CoV-2","ACCAGTAAGATCCGCA",2,55.41,10.8,-0.03,0.03,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCAGTAAGTACTTAG",3,42.18,9.03,-1.8,0.14,1.74,1.05,0.01,">1 nonsynonymous","V11H Y35L D137S",3
"lib2","SARS-CoV-2","ACCAGTACGAACGCCC",4,72.85,9.86,-0.97,0.09,2.32,1.06,0,">1 nonsynonymous","C61S I80L S184Q T193R",4
"lib2","SARS-CoV-2","ACCAGTACTATACATG",3,80.64,10.81,-0.03,0.05,2.91,1.12,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","ACCAGTAGTAACAACA",20,387.92,10.54,-0.3,0.04,2.91,1.04,0,">1 nonsynonymous","S41M P149I",2
"lib2","SARS-CoV-2","ACCAGTAGTCCGTACA",1,16.34,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","P82Q N120T Q144S",3
"lib2","SARS-CoV-2","ACCAGTATGACAACAA",1,36.1,10.9,0.06,0.06,2.89,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCAGTATGAGTTTGC",4,13.49,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13V I28V F99V S139L P197S",5
"lib2","SARS-CoV-2","ACCAGTATGATGTACT",2,99.31,8.48,-2.35,0.13,2.85,1.04,0.01,">1 nonsynonymous","G117A Y143W",2
"lib2","SARS-CoV-2","ACCAGTCAAAATTGCC",3,72.49,7.2,-3.64,0.24,1.76,1.17,0.01,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","ACCAGTCACACCCACC",3,15.64,7.47,-3.36,0.25,1.5,1.03,0.02,">1 nonsynonymous","P82S F160S S164F",3
"lib2","SARS-CoV-2","ACCAGTCACATTTTTA",10,148.12,10.08,-0.76,0.05,2.66,1.02,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","ACCAGTCAGATTAACT",1,52.33,10.84,0.01,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAGTCATAATTAGA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","G9S S43R D59K P133F F167* V173T",6
"lib2","SARS-CoV-2","ACCAGTCCAGACGGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42D L95V D112A Y121K Q168N L188*",6
"lib2","SARS-CoV-2","ACCAGTCGAATAACAA",5,83.12,10.87,0.03,0.04,2.92,1.1,0,">1 nonsynonymous","N1P N130M",2
"lib2","SARS-CoV-2","ACCAGTCGCAGCCACA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","Y35* S129C T140R G155M",4
"lib2","SARS-CoV-2","ACCAGTCTAAACGATA",8,48.55,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D34W A67S W106G",3
"lib2","SARS-CoV-2","ACCAGTGATAAGGATT",9,184.52,10.05,-0.78,0.03,2.85,1.07,0,">1 nonsynonymous","C61M G152W Q163R",3
"lib2","SARS-CoV-2","ACCAGTGATATATAAT",4,25.64,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","R16G F44L N58D N92E V115G K132T S147R N151T P169F",9
"lib2","SARS-CoV-2","ACCAGTGCACTCCTCA",2,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A V37R",2
"lib2","SARS-CoV-2","ACCAGTGCGAGCTGGC",13,125.59,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27E D97S R136L Y143R Y175M",5
"lib2","SARS-CoV-2","ACCAGTGTAAAATTCA",9,112.05,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","T55A E141L C158F",3
"lib2","SARS-CoV-2","ACCAGTGTCAGAGCCT",4,22.37,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","A14L D68G D90S G196S",4
"lib2","SARS-CoV-2","ACCAGTTACCATACTA",3,21.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T46Y P96I F134Y Y165L",4
"lib2","SARS-CoV-2","ACCAGTTAGACACATA",5,92.77,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C61R I72A A81F K94T",4
"lib2","SARS-CoV-2","ACCAGTTATCGCTACC",5,85.27,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V20W V115Y Y159D",3
"lib2","SARS-CoV-2","ACCAGTTCATTCGCAT",14,124.76,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K87S S108F P149S",3
"lib2","SARS-CoV-2","ACCAGTTCCATAAATA",4,92.86,10.86,0.02,0.06,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCAGTTGCCAAAAAC",1,25.81,10.76,-0.07,0.05,3,1,0,">1 nonsynonymous","S45A N64I",2
"lib2","SARS-CoV-2","ACCAGTTGTCCCCCAA",6,35,9.38,-1.46,0.08,2.02,1.06,0,">1 nonsynonymous","F8T V37P",2
"lib2","SARS-CoV-2","ACCAGTTTAATCCTCA",1,32.03,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F99T P149Q",2
"lib2","SARS-CoV-2","ACCAGTTTATTCACCG",4,75.74,9.88,-0.96,0.07,2.13,1.04,0,">1 nonsynonymous","P96Q N120R N130K E141K",4
"lib2","SARS-CoV-2","ACCATAAAAAACAAAT",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V65R R73D L95Q P149*",4
"lib2","SARS-CoV-2","ACCATAAAAGTTTATA",17,105.95,6,-4.84,1.31,1.5,1.25,0.02,">1 nonsynonymous","K26G V65R",2
"lib2","SARS-CoV-2","ACCATAAAATCTACAT",2,21.15,10.24,-0.59,0.11,2.71,1.12,0.01,">1 nonsynonymous","E10Y K26R",2
"lib2","SARS-CoV-2","ACCATAAACACAGAAC",4,3.41,NA,NA,NA,NA,NA,NA,"stop","P54T G146* N151Y Y178H",4
"lib2","SARS-CoV-2","ACCATAAACATTGCAG",10,95.44,6.72,-4.11,0.24,1.5,1.13,0.01,">1 nonsynonymous","S45T G86L F156V",3
"lib2","SARS-CoV-2","ACCATAAATATAGAGT",1,7.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G9K P96L N118I K128M P149K S184T",6
"lib2","SARS-CoV-2","ACCATAAATCAATGAA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","I2D C49M G117E A192* P197V",5
"lib2","SARS-CoV-2","ACCATAAATCTTAGCC",4,25.58,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T15S G51Y I88E I104L V153A",5
"lib2","SARS-CoV-2","ACCATAAATTAATGAA",8,79.55,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R16S L60T V103G G174A",4
"lib2","SARS-CoV-2","ACCATAACACCATAGC",6,125.78,10.9,0.06,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATAACATAAGTCC",3,42.01,9.96,-0.87,0.08,2.47,1.08,0,"1 nonsynonymous","S113A",1
"lib2","SARS-CoV-2","ACCATAACATAATAGA",7,68.74,10.87,0.04,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATAACATGATGGG",7,49.24,10.81,-0.02,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATAACCGCCTTCA",3,46.8,10.27,-0.57,0.11,2.48,1.05,0.01,">1 nonsynonymous","K56I P96A",2
"lib2","SARS-CoV-2","ACCATAACCTCTCCCG",7,121.19,10.88,0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATAAGACTCGTAT",1,35.49,6.78,-4.06,0.31,1.5,1.12,0.01,">1 nonsynonymous","V181N T201E",2
"lib2","SARS-CoV-2","ACCATAATAATCCACG",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121R E186I",2
"lib2","SARS-CoV-2","ACCATAATACATAGTC",3,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H S113Q N120S P149E",4
"lib2","SARS-CoV-2","ACCATAATAGACACGC",9,122.95,10.68,-0.16,0.03,2.96,1.05,0,">1 nonsynonymous","D59R L122I",2
"lib2","SARS-CoV-2","ACCATAATATTAAAAA",1,3.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86F",1
"lib2","SARS-CoV-2","ACCATAATCGGCCTAT",2,10.47,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T46K R179S",2
"lib2","SARS-CoV-2","ACCATAATCTGCCGTG",1,24.32,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G9H Y66S R124L G152I",4
"lib2","SARS-CoV-2","ACCATAATGTCTCTAC",1,36.83,10.8,-0.03,0.06,2.95,1.06,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","ACCATACACCTCTTCG",1,61.61,8.22,-2.61,0.1,2.35,1.16,0,">1 nonsynonymous","T3S L125Q G146V",3
"lib2","SARS-CoV-2","ACCATACACTTGAACA",1,19.49,7.09,-3.75,0.17,2.08,1.07,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","ACCATACAGGACCAAC",10,145.72,10.77,-0.06,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATACAGTAAAAAA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N13G T55* E141V",3
"lib2","SARS-CoV-2","ACCATACAGTCGTACG",3,21.52,9.09,-1.75,0.22,1.5,1.12,0.02,">1 nonsynonymous","S19Q S45F N130R",3
"lib2","SARS-CoV-2","ACCATACCAATTTTTG",3,19.9,6,-4.84,2,1.5,1.14,0.05,"1 nonsynonymous","C102D",1
"lib2","SARS-CoV-2","ACCATACCTAATACTA",1,47.84,10.76,-0.08,0.06,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATACGCTTAAAAA",1,48.93,10.26,-0.57,0.05,2.82,1.13,0,">1 nonsynonymous","F12I P169S",2
"lib2","SARS-CoV-2","ACCATACGGGGCACTA",5,32.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4D N92Q F185P",3
"lib2","SARS-CoV-2","ACCATACGTTCCTCAT",1,12.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43M Y50F N58M E141G Q176R",5
"lib2","SARS-CoV-2","ACCATACTAAAGAAAA",3,36.06,6,-4.84,2,1.5,1.42,0.06,">1 nonsynonymous","Y21M I88F L162Q G174E",4
"lib2","SARS-CoV-2","ACCATACTGCGACGAA",4,48.86,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F8S E141I L162G",3
"lib2","SARS-CoV-2","ACCATACTTGTTCTAA",4,62.75,10.09,-0.74,0.09,2.47,1.04,0,">1 nonsynonymous","T100Y W106R",2
"lib2","SARS-CoV-2","ACCATAGAATTTATGT",8,97.22,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D90H D98T N157Y",3
"lib2","SARS-CoV-2","ACCATAGACTTTGGGA",4,30.4,6.51,-4.33,0.32,1.5,1.32,0.01,">1 nonsynonymous","K48S A81S V115M P133Y I142L",5
"lib2","SARS-CoV-2","ACCATAGAGACTTTAC",5,67.41,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F12T K48L Y119R R127C F134E",5
"lib2","SARS-CoV-2","ACCATAGATGTATAAT",9,171.48,10.77,-0.07,0.03,2.97,1.06,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","ACCATAGATTCCGTAC",2,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E F44R D90N Q168S",4
"lib2","SARS-CoV-2","ACCATAGCTGACCAGC",4,84.97,9.99,-0.84,0.07,2.61,1.02,0,"1 nonsynonymous","I28G",1
"lib2","SARS-CoV-2","ACCATAGGAAGAACTC",2,2.03,NA,NA,NA,NA,NA,NA,"stop","N4A N109* P197L",3
"lib2","SARS-CoV-2","ACCATAGGCCTGCATG",2,47.92,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","S19T Y143S",2
"lib2","SARS-CoV-2","ACCATAGTAAGCAGAT",1,10.33,6,-4.84,2,3,1.08,0,">1 nonsynonymous","P7L T46M G86R",3
"lib2","SARS-CoV-2","ACCATAGTATAGTCCT",6,48.38,8.63,-2.21,0.26,1.5,1.12,0.03,">1 nonsynonymous","L5Y A14Q I28P D97A L122R",5
"lib2","SARS-CoV-2","ACCATAGTCACTACGA",7,3.34,NA,NA,NA,NA,NA,NA,"stop","F99V I142*",2
"lib2","SARS-CoV-2","ACCATAGTCCAACCTT",2,35.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37G Y121I G146I Y178I",4
"lib2","SARS-CoV-2","ACCATAGTTAACAAGT",6,37.58,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N13M C31P D68L Y93W",4
"lib2","SARS-CoV-2","ACCATAGTTCACGACA",9,157.98,10.02,-0.82,0.07,2.1,1.03,0,">1 nonsynonymous","N1K L5V R16A A81H",4
"lib2","SARS-CoV-2","ACCATATAAAGAGTTA",5,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I V71G G83R D90R I104N D137T L183P",7
"lib2","SARS-CoV-2","ACCATATAAATCATTA",5,24.95,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L5Q A89Q P96S Y165C T170N",5
"lib2","SARS-CoV-2","ACCATATAACGAGAAT",5,89.59,9.72,-1.12,0.02,2.94,1.07,0,"1 nonsynonymous","P169C",1
"lib2","SARS-CoV-2","ACCATATACTTATTAT",3,3.1,NA,NA,NA,NA,NA,NA,"stop","F8* V37K D59V",3
"lib2","SARS-CoV-2","ACCATATATTTATACA",5,64.48,10.88,0.04,0.07,2.87,1.15,0,"1 nonsynonymous","S129K",1
"lib2","SARS-CoV-2","ACCATATCCCTTACCC",3,97.58,10.82,-0.02,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATATCTATTAACA",4,19.16,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49K N130F F156W",3
"lib2","SARS-CoV-2","ACCATATGCCTGAATA",2,51.73,10.42,-0.41,0.06,2.86,1.06,0,"1 nonsynonymous","L60D",1
"lib2","SARS-CoV-2","ACCATATTATCTGATC",1,35.65,9.08,-1.76,0.03,2.9,1.1,0,">1 nonsynonymous","S36L Y119V",2
"lib2","SARS-CoV-2","ACCATATTTGTCAAAA",5,11.88,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G83S A89M P149A T170R",4
"lib2","SARS-CoV-2","ACCATCAAATACGGAC",19,32.32,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","V103Q E154T",2
"lib2","SARS-CoV-2","ACCATCAACCAATCAT",2,12.43,9.18,-1.65,0.16,2.72,1.1,0.01,">1 nonsynonymous","G146E V194A",2
"lib2","SARS-CoV-2","ACCATCAAGTATCCAT",2,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N S53G Y91T D98Y G174T",5
"lib2","SARS-CoV-2","ACCATCAATCAACGGA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","P54G Y91H A105L L122* G155V",5
"lib2","SARS-CoV-2","ACCATCAATGTGAGTG",6,36.94,9.34,-1.5,0.05,2.48,1.03,0,">1 nonsynonymous","C6M F44I K114V",3
"lib2","SARS-CoV-2","ACCATCACATTGTGAA",10,198.36,10.83,-0.01,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATCACGGCAAAGT",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23Q D59M D98I",3
"lib2","SARS-CoV-2","ACCATCAGAGTCAATT",1,10.83,10.71,-0.13,0.07,3,1,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","ACCATCATATTCGTTT",6,58.17,10.8,-0.03,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATCATTAACGAGA",3,1.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","ACCATCATTGCTTGGG",11,227.3,8.29,-2.55,0.12,2.5,1.04,0.01,">1 nonsynonymous","V37A T63V K94N S129V T170D",5
"lib2","SARS-CoV-2","ACCATCCAATTATCTA",5,66.28,8.47,-2.37,0.24,1.5,1.05,0.02,">1 nonsynonymous","D90N N110I R136P",3
"lib2","SARS-CoV-2","ACCATCCACGACCCGA",16,19.94,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42P C49Y K56A V103I N107K F134D",6
"lib2","SARS-CoV-2","ACCATCCAGAATGGAT",7,67.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55H F62S I104S N157F",4
"lib2","SARS-CoV-2","ACCATCCTGCATCAAT",4,9.01,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P7A Y93H A105Y",3
"lib2","SARS-CoV-2","ACCATCGCATCATTGG",1,25.97,10.76,-0.07,0.04,2.96,1.07,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","ACCATCGTATTGTTAA",4,45.41,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2D R25G S45Y L57W",4
"lib2","SARS-CoV-2","ACCATCTAAGAAATAA",3,63.43,10.92,0.08,0.07,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATCTACTACAGCT",11,19.2,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","S41H Y50V D112V Y121M K128L V173G",6
"lib2","SARS-CoV-2","ACCATCTACTAGCTGC",2,34.86,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","S19L R27G R127H",3
"lib2","SARS-CoV-2","ACCATCTATAAACTTA",6,12.12,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","C6I N30K Y50H G146W F167S",5
"lib2","SARS-CoV-2","ACCATCTATAAGAACC",1,51.1,9.79,-1.04,0.07,2.65,1.05,0,">1 nonsynonymous","F62A A105V",2
"lib2","SARS-CoV-2","ACCATCTCAGCCTCCA",6,58.82,8.68,-2.16,0.27,1.5,1.04,0.03,">1 nonsynonymous","N13L T63I T85N V115S A145V A192T T201K",7
"lib2","SARS-CoV-2","ACCATCTCATCCACGT",13,144.35,10.8,-0.03,0.04,2.91,1.07,0,"1 nonsynonymous","A192W",1
"lib2","SARS-CoV-2","ACCATCTCTTGTTATC",7,1.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACCATCTGGTTGATAA",12,89.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16V S139W Y165S",3
"lib2","SARS-CoV-2","ACCATCTTACCGACGC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161L",1
"lib2","SARS-CoV-2","ACCATCTTACTGTCTA",2,42.59,10.17,-0.66,0.05,2.99,1.05,0,">1 nonsynonymous","C6Y S43R",2
"lib2","SARS-CoV-2","ACCATCTTGTTCCTCC",5,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H N13V A42N C61L A105S S139P",6
"lib2","SARS-CoV-2","ACCATGAAGAACACCG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","A42K Y91V G196D T201*",4
"lib2","SARS-CoV-2","ACCATGAATGCCATAT",6,102.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T3Q S36F K128S G172V",4
"lib2","SARS-CoV-2","ACCATGAATTCAACAG",2,57.55,9.8,-1.04,0.17,1.9,1.04,0.02,">1 nonsynonymous","G51V N120Y",2
"lib2","SARS-CoV-2","ACCATGACAAAATGCA",6,45.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W K94V C158R",3
"lib2","SARS-CoV-2","ACCATGATACTTATCG",1,38.73,10.1,-0.73,0.16,2.23,1.03,0.01,">1 nonsynonymous","N4G A81L",2
"lib2","SARS-CoV-2","ACCATGATCAAAACAC",1,18.81,9.02,-1.81,0.08,1.82,1.05,0,">1 nonsynonymous","A22L E135R",2
"lib2","SARS-CoV-2","ACCATGATCAACAACT",3,7.64,6.97,-3.87,0.37,1.55,1.23,0.03,">1 nonsynonymous","C6G W23S S43L",3
"lib2","SARS-CoV-2","ACCATGATCCAAAATG",3,26.9,9.55,-1.29,0.07,2.99,1.04,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ACCATGATGGGACTAT",1,6.07,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I28M L38H T100L R136F C150L",5
"lib2","SARS-CoV-2","ACCATGCTCCCCACCA",7,1.05,NA,NA,NA,NA,NA,NA,"stop","R78* G83C L95R L188Q",4
"lib2","SARS-CoV-2","ACCATGGAGAATACGT",12,129.31,10.57,-0.26,0.06,2.9,1.11,0,">1 nonsynonymous","I2E K132L F160D",3
"lib2","SARS-CoV-2","ACCATGGCTACCCGCA",3,16.32,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y91W N118K G146K G174K L183V",5
"lib2","SARS-CoV-2","ACCATGGTTATGTGGT",9,49.61,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","T55N G86R V103L V153G",4
"lib2","SARS-CoV-2","ACCATGTAATTATGAT",12,13.09,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D34H D90T C102L F167Q",4
"lib2","SARS-CoV-2","ACCATGTGTACTCCAA",1,18.32,6,-4.84,2,3,1.06,0,">1 nonsynonymous","I2G Y39R T55S N107V P149V T170L P177S",7
"lib2","SARS-CoV-2","ACCATGTTCTATAATA",13,265.76,10.38,-0.45,0.04,2.85,1.08,0,">1 nonsynonymous","V37I S45M",2
"lib2","SARS-CoV-2","ACCATGTTCTGTGGAT",7,154.3,9.77,-1.07,0.08,2.14,1.07,0,">1 nonsynonymous","S36V C61W E141F",3
"lib2","SARS-CoV-2","ACCATGTTTAGTGTTC",10,125.96,10.66,-0.18,0.04,2.9,1.1,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","ACCATTAAAAGCGAAG",4,42.33,10.87,0.03,0.07,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCATTAAACCCAACC",10,1.55,NA,NA,NA,NA,NA,NA,"stop","C150* F156Q",2
"lib2","SARS-CoV-2","ACCATTAAAGTTGATA",12,269.74,10.73,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","H189F",1
"lib2","SARS-CoV-2","ACCATTAACTCACTAA",12,4.66,NA,NA,NA,NA,NA,NA,"stop","T85V D90*",2
"lib2","SARS-CoV-2","ACCATTAATAGTAGGC",3,30.85,9.81,-1.02,0.19,2.57,1.07,0.01,"1 nonsynonymous","N107E",1
"lib2","SARS-CoV-2","ACCATTACCGACTGAT",3,26.6,6.07,-4.77,1.06,1.5,1.16,0.03,">1 nonsynonymous","A89Y G146Q",2
"lib2","SARS-CoV-2","ACCATTACGACGGAAT",8,169.52,10.9,0.06,0.06,2.96,1.05,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","ACCATTACGGGACGGT",3,89.96,10.57,-0.26,0.02,2.95,1.04,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","ACCATTACGTTTCCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","K48D P96* P161S T201R",4
"lib2","SARS-CoV-2","ACCATTAGCGATAATG",6,57.69,10.8,-0.04,0.05,2.91,1.05,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","ACCATTAGTCGTTTTT",8,0.28,NA,NA,NA,NA,NA,NA,"stop","F17N Y39* P169W",3
"lib2","SARS-CoV-2","ACCATTATAAACGTCG",1,9.11,10.72,-0.11,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATTATACACCCTT",6,72.18,10.93,0.09,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATTATACCCATCG",9,38.45,6,-4.84,1.34,3,1.24,0.01,">1 nonsynonymous","F99S S139P T148H",3
"lib2","SARS-CoV-2","ACCATTATATTATACG",8,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136P N151S S184R",3
"lib2","SARS-CoV-2","ACCATTATCCCTATCT",3,51.05,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","L5G I72G D98G S129L",4
"lib2","SARS-CoV-2","ACCATTATCCGATCCA",4,39.61,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K26F T85I N120W G166F G174E",5
"lib2","SARS-CoV-2","ACCATTATTGCTAGAG",6,73.45,10.59,-0.25,0.05,2.91,1.07,0,">1 nonsynonymous","S29Y T46I",2
"lib2","SARS-CoV-2","ACCATTCAGAGTAACT",21,189.01,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N4A C6L G9A D97N F167T",5
"lib2","SARS-CoV-2","ACCATTCCATGATGTA",2,6.45,6,-4.84,2,1.5,1.04,0.04,">1 nonsynonymous","N58I G83D I88E T100D",4
"lib2","SARS-CoV-2","ACCATTCGACGTAAGG",7,0.69,NA,NA,NA,NA,NA,NA,"stop","K48* G155R F167L",3
"lib2","SARS-CoV-2","ACCATTCTCAAGATGA",18,54.45,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","F8R V103S L122Q F156L",4
"lib2","SARS-CoV-2","ACCATTGAACGAAAGC",3,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D I88C P169Y",3
"lib2","SARS-CoV-2","ACCATTGCACAACTCT",6,7.79,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","V11S P54Y D97N V103L G117R Y121W",6
"lib2","SARS-CoV-2","ACCATTGCCCCAGTAA",2,20.63,10.74,-0.1,0.06,2.97,1.05,0,">1 nonsynonymous","S41C P54E L60Y",3
"lib2","SARS-CoV-2","ACCATTGCGAGAAAAA",2,13.15,10.4,-0.44,0.07,2.86,1.1,0,">1 nonsynonymous","F8L T15L L60R",3
"lib2","SARS-CoV-2","ACCATTGGACTACAAA",9,57.2,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14R F99T",2
"lib2","SARS-CoV-2","ACCATTGTACGGTGTG",8,47.21,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S36E A67P G86R",3
"lib2","SARS-CoV-2","ACCATTGTCCTGAGAA",3,76.98,8.56,-2.28,0.04,2.97,1.03,0,">1 nonsynonymous","K26V S113Y",2
"lib2","SARS-CoV-2","ACCATTGTCTCAGCCA",8,3.16,NA,NA,NA,NA,NA,NA,"stop","N4* S41Y P54I E141G T201L",5
"lib2","SARS-CoV-2","ACCATTGTGAATCGTG",3,71.1,10.85,0.02,0.07,2.85,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATTGTGCACGCCA",2,67.5,8.56,-2.28,0.1,2.92,1.1,0,"1 nonsynonymous","S113N",1
"lib2","SARS-CoV-2","ACCATTTAAGTAGCCC",7,60.9,6.16,-4.68,0.65,1.5,1.17,0.02,">1 nonsynonymous","G101V Y119L N157T",3
"lib2","SARS-CoV-2","ACCATTTAATCGCACG",11,3.43,NA,NA,NA,NA,NA,NA,"stop","N13Y A42T K56* W106S S113P T140A N151H",7
"lib2","SARS-CoV-2","ACCATTTACTGTAAAC",4,96.02,10.77,-0.07,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATTTATAACCTAT",3,26.88,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","V103W",1
"lib2","SARS-CoV-2","ACCATTTATGTGACAA",5,32.21,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","C6L N40I V65W I142M",4
"lib2","SARS-CoV-2","ACCATTTATTAAACTA",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q W23R G83W K128V",4
"lib2","SARS-CoV-2","ACCATTTCCCGAACTT",3,0.55,NA,NA,NA,NA,NA,NA,"stop","N1G A33G P149* V153Y",4
"lib2","SARS-CoV-2","ACCATTTCTCAAAAAA",7,57.37,10.85,0.01,0.07,2.92,1.08,0,"1 nonsynonymous","P54F",1
"lib2","SARS-CoV-2","ACCATTTGCGACCGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T85* F99P G116S",3
"lib2","SARS-CoV-2","ACCATTTGCGTTTAGA",5,67.28,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","I80E V180Y",2
"lib2","SARS-CoV-2","ACCATTTTAAAAAATA",3,82.83,10.87,0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCATTTTAAGACCTG",4,21.43,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","C31S C49K P54T A105G N109L S129K Y178E A190G P197M",9
"lib2","SARS-CoV-2","ACCATTTTATGCCACT",10,83.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I2V V71R V77I W106F T201H",5
"lib2","SARS-CoV-2","ACCATTTTTATGATAA",1,11.99,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","F17K Q168V",2
"lib2","SARS-CoV-2","ACCATTTTTGGGGACC",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Q W106S L183N",3
"lib2","SARS-CoV-2","ACCCAAAAAAGACCTA",8,98.7,9.32,-1.51,0.03,2.96,1.05,0,">1 nonsynonymous","N118R N151S T201Q",3
"lib2","SARS-CoV-2","ACCCAAAAACCAATAA",12,59.92,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V20W I142T P149L",3
"lib2","SARS-CoV-2","ACCCAAAAATGTTATC",2,21.31,8.7,-2.14,0.27,1.5,1.07,0.03,"1 nonsynonymous","K94I",1
"lib2","SARS-CoV-2","ACCCAAAACACCTAGG",10,121.99,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F8L R124M",2
"lib2","SARS-CoV-2","ACCCAAAACGTACCAT",2,0.17,NA,NA,NA,NA,NA,NA,"stop","S41N L60* K128L",3
"lib2","SARS-CoV-2","ACCCAAAACGTGCATA",9,0.51,NA,NA,NA,NA,NA,NA,"stop","P7V K48P D112M R127E E141* G166L V182F",7
"lib2","SARS-CoV-2","ACCCAAAAGTGTATGC",3,16.13,6.51,-4.33,0.49,1.5,1.09,0.02,">1 nonsynonymous","G51I L131R",2
"lib2","SARS-CoV-2","ACCCAAAATAAAACTT",4,9.59,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C31F Y50Q L57Q E135S",4
"lib2","SARS-CoV-2","ACCCAAAATATTCCGA",4,18.6,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","I88K A105D G146T K198Q",4
"lib2","SARS-CoV-2","ACCCAAAATCCACCGC",1,19.3,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A81E Q176P",2
"lib2","SARS-CoV-2","ACCCAAAATTTGAGAC",4,35.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C61L K114N R127C",3
"lib2","SARS-CoV-2","ACCCAAACATTGTAAA",5,46.22,8.25,-2.58,0.25,1.5,1.06,0.03,"1 nonsynonymous","Y21R",1
"lib2","SARS-CoV-2","ACCCAAACCACATCCC",2,32.23,6.16,-4.67,0.66,1.5,1.2,0.02,">1 nonsynonymous","L57F G86H V173F",3
"lib2","SARS-CoV-2","ACCCAAACGGTATTGT",2,67.35,10.02,-0.81,0.06,2.4,1.03,0,">1 nonsynonymous","L57P S184N",2
"lib2","SARS-CoV-2","ACCCAAAGGGTCCAAC",9,109.87,10.51,-0.33,0.04,2.92,1.05,0,">1 nonsynonymous","A33I L60T S129G",3
"lib2","SARS-CoV-2","ACCCAAATACAAGAAA",1,26.45,10.59,-0.25,0.07,2.88,1.14,0,"1 nonsynonymous","Y39P",1
"lib2","SARS-CoV-2","ACCCAAATATTATATA",3,44.36,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","K48N F70D",2
"lib2","SARS-CoV-2","ACCCAAATCACCCCAC",2,14.18,10.89,0.06,0.09,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCAAATCCAAGATC",3,57.57,9.6,-1.24,0.1,2.05,1.06,0,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","ACCCAAATTACTGACT",1,26.29,10.8,-0.03,0.08,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCAACAAATTAACG",14,261.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V77R V115Y G146V Q176M",4
"lib2","SARS-CoV-2","ACCCAACACCAGATAG",1,9.08,6,-4.84,2,3,1.15,0.02,">1 nonsynonymous","F70E D90N G117D K132T T140I G155I G166E K198S",8
"lib2","SARS-CoV-2","ACCCAACACCATCTAA",13,212.53,10.74,-0.09,0.02,2.95,1.04,0,"1 nonsynonymous","A22M",1
"lib2","SARS-CoV-2","ACCCAACCACATCATA",6,43.06,6,-4.84,1.72,1.5,1.26,0.04,">1 nonsynonymous","G86D L162V",2
"lib2","SARS-CoV-2","ACCCAACCCCTAAAAC",3,44.11,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F8P V37I G86E D97C L122T K128N",6
"lib2","SARS-CoV-2","ACCCAACCGCATTATA",8,26.47,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A14H G86K T100L",3
"lib2","SARS-CoV-2","ACCCAACGCACAATTA",1,11.66,9.2,-1.64,0.1,2.79,1.02,0,">1 nonsynonymous","Q84L L125R",2
"lib2","SARS-CoV-2","ACCCAACGGAGGTTCG",1,10.14,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9E G51H N64R F99L V173S",5
"lib2","SARS-CoV-2","ACCCAACGTTTACGAG",14,65.06,9.23,-1.61,0.39,1.5,1,0.08,">1 nonsynonymous","T15S A42D G83D V103G G116V I142Y V173Q",7
"lib2","SARS-CoV-2","ACCCAACTAGGACAAC",8,81.2,10.26,-0.57,0.08,2.44,1,0,">1 nonsynonymous","T3I F12V",2
"lib2","SARS-CoV-2","ACCCAACTATTGCCGT",3,89.73,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","ACCCAAGAACAGACGG",4,5.29,10.24,-0.59,0.22,2.3,1.5,0.02,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","ACCCAAGAATACCGGA",16,92.78,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9T L57V V103S N151L V173T",5
"lib2","SARS-CoV-2","ACCCAAGATATCAGAA",6,89.02,10.5,-0.33,0.05,2.96,1.01,0,">1 nonsynonymous","T15N G83N",2
"lib2","SARS-CoV-2","ACCCAAGATCACTCAA",4,85.38,8.48,-2.35,0.13,2.36,1.14,0.01,">1 nonsynonymous","N30T N40P Y119S",3
"lib2","SARS-CoV-2","ACCCAAGCACCACACT",2,27.2,9.3,-1.53,0.09,1.91,1.11,0,">1 nonsynonymous","C6D N30D S41T K48V D97R K128E",6
"lib2","SARS-CoV-2","ACCCAAGGAAATGCCA",4,10.29,8.24,-2.6,0.78,1.76,1.18,0.07,">1 nonsynonymous","N1K G9S S45L S139I P149V P197F",6
"lib2","SARS-CoV-2","ACCCAAGGATGCTCCA",4,26.75,7.05,-3.79,0.41,1.5,1.11,0.04,">1 nonsynonymous","S45F Y165A",2
"lib2","SARS-CoV-2","ACCCAAGGCGCGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","F62*",1
"lib2","SARS-CoV-2","ACCCAAGGCTTAAAAA",12,193.74,10.21,-0.62,0.03,2.92,1.05,0,">1 nonsynonymous","C6T V37M",2
"lib2","SARS-CoV-2","ACCCAAGGTAATTGTA",4,27.07,6.53,-4.3,0.28,1.5,1.09,0.01,">1 nonsynonymous","C49N D90S G101S S184W",4
"lib2","SARS-CoV-2","ACCCAAGTATCCTACG",16,1.3,NA,NA,NA,NA,NA,NA,"stop","A18L D112W R124* Y159S K199N",5
"lib2","SARS-CoV-2","ACCCAAGTGAAGCACT",8,41.96,9.83,-1.01,0.07,1.99,1.02,0,">1 nonsynonymous","N4S C49V",2
"lib2","SARS-CoV-2","ACCCAAGTTCATATGC",1,48.28,10.93,0.09,0.07,2.88,1.07,0,"1 nonsynonymous","F8W",1
"lib2","SARS-CoV-2","ACCCAATAAGCCTTTC",2,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y E10F D90E",3
"lib2","SARS-CoV-2","ACCCAATACTAAGACC",7,24.75,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S45V N92R",2
"lib2","SARS-CoV-2","ACCCAATACTAGGTAT",9,123.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11D G83M C158Y",3
"lib2","SARS-CoV-2","ACCCAATAGTGTCCTT",8,58.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S41G R78W G86K P161I",5
"lib2","SARS-CoV-2","ACCCAATATCTGACGA",3,20.88,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","T63L S108Y G117T E154R",4
"lib2","SARS-CoV-2","ACCCAATATGAAGCAT",1,13.11,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V77N N120W S139E",3
"lib2","SARS-CoV-2","ACCCAATATGCCCTAA",13,182.69,10.84,0,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCCAATATGTGTATA",9,0.26,NA,NA,NA,NA,NA,NA,"stop","F8*",1
"lib2","SARS-CoV-2","ACCCAATATTAACCAG",1,97.51,10.79,-0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCAATCATACGAAC",3,46.87,10.88,0.04,0.05,2.9,1.09,0,">1 nonsynonymous","R27Q S139K N171W",3
"lib2","SARS-CoV-2","ACCCAATCGAATTTAG",5,2.7,NA,NA,NA,NA,NA,NA,"stop","L60* A81S T140Q",3
"lib2","SARS-CoV-2","ACCCAATGAACCAGGT",4,49.29,10.7,-0.14,0.06,2.92,1.07,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","ACCCAATGCTACCCCC",2,76.7,9.89,-0.95,0.03,2.9,1.1,0,">1 nonsynonymous","A81S Q168N",2
"lib2","SARS-CoV-2","ACCCAATGCTTTTTTT",3,98.7,10.81,-0.03,0.05,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCAATGGGTACCGA",2,39.85,9.13,-1.71,0.07,2.86,1.08,0,">1 nonsynonymous","R27K A42N Y119N",3
"lib2","SARS-CoV-2","ACCCAATTGGAATGAA",3,7.68,NA,NA,NA,NA,NA,NA,"stop","A33* T140D G152Y",3
"lib2","SARS-CoV-2","ACCCACAAAAAGAAAA",2,30.34,10.44,-0.39,0.09,2.76,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCACAACAAGTTGG",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T R136V",2
"lib2","SARS-CoV-2","ACCCACAACAGCTAAA",4,11.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8V R179L",2
"lib2","SARS-CoV-2","ACCCACAACTGCGCCG",2,14.88,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V37K K87S Y119E R127D Y165W",5
"lib2","SARS-CoV-2","ACCCACAAGAAAACTA",11,247.09,10.16,-0.67,0.04,2.73,1.04,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","ACCCACAATTAAACGA",5,17.9,6,-4.84,1.67,3,1.18,0,">1 nonsynonymous","P149L L162S",2
"lib2","SARS-CoV-2","ACCCACACCGCTTAAA",8,31.41,8.15,-2.68,0.33,1.5,1.18,0.04,">1 nonsynonymous","S45W K128T Y165F",3
"lib2","SARS-CoV-2","ACCCACACGGCCAAAT",3,65.79,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44S P96F Y121L V173D T201L",5
"lib2","SARS-CoV-2","ACCCACACTTAGACAC",13,10.85,NA,NA,NA,NA,NA,NA,"stop","V65* I104T",2
"lib2","SARS-CoV-2","ACCCACAGTAGTACAA",5,1.29,NA,NA,NA,NA,NA,NA,"stop","F62* Y91A N120C N130Y E154L E186I",6
"lib2","SARS-CoV-2","ACCCACATCAACTTTA",4,80.95,10.62,-0.21,0.09,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCACATTATGCCGA",3,122.08,10.27,-0.57,0.04,2.82,1.05,0,">1 nonsynonymous","N64Y D90T I104L",3
"lib2","SARS-CoV-2","ACCCACCAATATAAAA",14,191.31,10.74,-0.1,0.02,3,1.02,0,">1 nonsynonymous","D59N N110L",2
"lib2","SARS-CoV-2","ACCCACCACCCTAAAT",1,0.54,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","ACCCACCCCGTTTCGA",1,19.12,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y93Q G117D G146C L162S",4
"lib2","SARS-CoV-2","ACCCACCCTCCCCCGC",4,1.14,NA,NA,NA,NA,NA,NA,"stop","A14P K56* F62K G86K",4
"lib2","SARS-CoV-2","ACCCACCCTTATACAT",2,29.61,6.09,-4.75,0.67,1.97,1.2,0.01,">1 nonsynonymous","V37W K48R P96M T100V W106I",5
"lib2","SARS-CoV-2","ACCCACCTCAATAATT",19,142.5,10.67,-0.17,0.04,2.91,1.06,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","ACCCACGAAACGGGCG",3,33.65,9.4,-1.43,0.12,1.94,1.05,0.01,">1 nonsynonymous","L60T A81W S184L",3
"lib2","SARS-CoV-2","ACCCACGACTTCAAAT",2,49.42,7.98,-2.86,0.14,1.69,1.08,0.01,">1 nonsynonymous","T63Y N107P N120P",3
"lib2","SARS-CoV-2","ACCCACGATACCACTG",7,88.38,9.85,-0.98,0.1,1.92,1.06,0,">1 nonsynonymous","D97F V115D R136N S147P",4
"lib2","SARS-CoV-2","ACCCACGATTAGATGG",2,65.03,10.24,-0.59,0.06,2.62,1.08,0,">1 nonsynonymous","A14K T100A",2
"lib2","SARS-CoV-2","ACCCACGCATTAGGAT",2,63.18,9.49,-1.35,0.12,1.96,1.1,0.01,">1 nonsynonymous","E10G S45V S53L",3
"lib2","SARS-CoV-2","ACCCACGGTGGCGGAC",4,50.69,7.64,-3.2,0.22,1.74,1.05,0.01,">1 nonsynonymous","D90T Y175L",2
"lib2","SARS-CoV-2","ACCCACTATCACTCAC",5,25.85,6.39,-4.45,0.85,1.5,1.22,0.04,">1 nonsynonymous","N64R W106Q Y121M K128V",4
"lib2","SARS-CoV-2","ACCCACTCCCATGATC",5,32.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12Y Y39L Y50S G86R N92S N157T R179P",7
"lib2","SARS-CoV-2","ACCCACTCGATCCAAA",5,47.89,8.47,-2.36,0.17,1.55,1.12,0.01,">1 nonsynonymous","A42R N107Y",2
"lib2","SARS-CoV-2","ACCCACTCGTTGCAAT",7,43.3,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V20L G83H V103T T140Q",4
"lib2","SARS-CoV-2","ACCCACTCTCGATGAA",10,83.31,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S29V G51Y F99Y N118S",4
"lib2","SARS-CoV-2","ACCCACTGATATGCCC",4,122.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V37Q L57I Y66C S69N Q144E V180C",6
"lib2","SARS-CoV-2","ACCCACTGCCGTATAT",3,90.4,10.26,-0.58,0.06,2.83,1.1,0,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","ACCCACTGTGACTTCC",3,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17D P96R",2
"lib2","SARS-CoV-2","ACCCAGAAGTAGTACT",17,103.88,6.99,-3.84,0.23,1.5,1.16,0.01,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","ACCCAGACTTGTATAC",8,63.61,10.85,0.01,0.06,2.9,1.11,0,">1 nonsynonymous","S36V F160N",2
"lib2","SARS-CoV-2","ACCCAGAGAGCTGTGA",3,49.96,8.44,-2.4,0.12,1.59,1.14,0.01,">1 nonsynonymous","V11N V32R P169A",3
"lib2","SARS-CoV-2","ACCCAGATTAGAACTC",2,10.3,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N1C P96S P149L C158N",4
"lib2","SARS-CoV-2","ACCCAGCAAAAACGTA",1,13.83,9.35,-1.49,0.16,2.08,1.06,0.01,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","ACCCAGCATGCAGGCA",3,13.52,6.61,-4.22,0.64,2.29,1.15,0.02,">1 nonsynonymous","N30I S43G S139F T148S",4
"lib2","SARS-CoV-2","ACCCAGCATTGTTCGG",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T V77C",2
"lib2","SARS-CoV-2","ACCCAGCCCAAAACCG",2,41.04,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","L95M L162G",2
"lib2","SARS-CoV-2","ACCCAGCCGAAATGCG",8,26.24,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L5Q L131Y P149M T170L",4
"lib2","SARS-CoV-2","ACCCAGCGGAATTCAT",3,40.79,8.38,-2.45,0.22,1.5,1.09,0.02,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ACCCAGCGGGAATTAC",4,44.77,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8L T85A N120L P161M",4
"lib2","SARS-CoV-2","ACCCAGCTTGTACACC",6,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S L125S",2
"lib2","SARS-CoV-2","ACCCAGGAAATATGTA",1,16.26,10.13,-0.7,0.13,2.58,1.02,0.01,">1 nonsynonymous","T63N T85N Y121I N171Q T201F",5
"lib2","SARS-CoV-2","ACCCAGGAAGCCAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","K114Q K199*",2
"lib2","SARS-CoV-2","ACCCAGGTACAATAGT",2,19.62,10.77,-0.07,0.05,2.96,1.07,0,"1 nonsynonymous","T3A",1
"lib2","SARS-CoV-2","ACCCAGGTTACGGTAA",15,106.61,9.45,-1.39,0.09,1.87,1.1,0,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","ACCCAGTCGCTATATG",4,47.72,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R25D S43M L57G N157K",4
"lib2","SARS-CoV-2","ACCCAGTTAAAAATAA",12,106.44,9.71,-1.13,0.05,1.98,1.02,0,">1 nonsynonymous","S36D G51D K128V P149T",4
"lib2","SARS-CoV-2","ACCCATAAAAACTGTC",7,89.56,9.35,-1.49,0.07,2.02,1.07,0,">1 nonsynonymous","A81I Y121L",2
"lib2","SARS-CoV-2","ACCCATAACATAACTA",4,77.23,10.65,-0.18,0.04,2.88,1.07,0,">1 nonsynonymous","A33T T201K",2
"lib2","SARS-CoV-2","ACCCATAAGACCAATC",1,6.85,10.7,-0.13,0.17,2.74,1.21,0.02,">1 nonsynonymous","T3S G152F",2
"lib2","SARS-CoV-2","ACCCATAAGGGAAGGC",4,11.82,8.89,-1.94,0.57,1.5,1,0.06,">1 nonsynonymous","V52F S129Y F156P L183T",4
"lib2","SARS-CoV-2","ACCCATAATCCTGATC",2,19.84,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7V Y119L T140N E141G G174L",5
"lib2","SARS-CoV-2","ACCCATAATGATCCAG",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H D59L F70L",3
"lib2","SARS-CoV-2","ACCCATACCAATGCAA",7,109.75,9.73,-1.1,0.08,2.61,1.09,0,">1 nonsynonymous","Y66T D75L Q84S S129V",4
"lib2","SARS-CoV-2","ACCCATACTTAAAACA",5,28.44,10.15,-0.68,0.13,2.45,1.06,0.01,">1 nonsynonymous","L5G N40I T201C",3
"lib2","SARS-CoV-2","ACCCATATACGTCCGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T K94V",2
"lib2","SARS-CoV-2","ACCCATATGCCCTAAA",18,83.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61G V103W G172E",3
"lib2","SARS-CoV-2","ACCCATATTGCCAAAA",2,12.08,10.96,0.12,0.07,2.95,1.05,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","ACCCATCAATCGCATA",5,86.43,10.71,-0.12,0.02,2.91,1.08,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","ACCCATCAGCTACATT",2,44.54,7.05,-3.79,0.39,1.5,1.12,0.03,">1 nonsynonymous","I2Y L57K G83K D90S S139K",5
"lib2","SARS-CoV-2","ACCCATCATAAAATTG",4,0.81,NA,NA,NA,NA,NA,NA,"stop","D34A G74S W106V K114* R127S",5
"lib2","SARS-CoV-2","ACCCATCCAAGATGAT",11,93.52,8.49,-2.34,0.24,1.5,1.13,0.02,">1 nonsynonymous","A22L Y91A K128S",3
"lib2","SARS-CoV-2","ACCCATCCATACTACA",4,0,NA,NA,NA,NA,NA,NA,"stop","F12V W23R N40S L125M T201*",5
"lib2","SARS-CoV-2","ACCCATCCTCATTATG",3,7.35,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","N1F S45M G86L T140D L162W G174T V182C",7
"lib2","SARS-CoV-2","ACCCATCGAATTCACG",15,133.64,10.85,0.02,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCATCGTCGCCGAG",2,21.57,10.5,-0.34,0.07,2.89,1.09,0,"1 nonsynonymous","D34N",1
"lib2","SARS-CoV-2","ACCCATCTAATAATCC",17,254.95,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","T55E I142H Y165N N171I",4
"lib2","SARS-CoV-2","ACCCATCTAATTACAA",4,0.56,NA,NA,NA,NA,NA,NA,"stop","V37T D90Y N118* F126Y",4
"lib2","SARS-CoV-2","ACCCATGACGCTAACA",4,66.77,7.86,-2.98,0.23,1.5,1.06,0.02,">1 nonsynonymous","S19K R25S K48R",3
"lib2","SARS-CoV-2","ACCCATGAGCAATTAT",3,20.45,6.94,-3.9,0.34,1.5,1.11,0.03,">1 nonsynonymous","S43L T63Y P82T K94R",4
"lib2","SARS-CoV-2","ACCCATGCACCAACCA",3,20.31,10.92,0.09,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCATGCCTTAACGA",3,33.5,10.74,-0.09,0.05,2.99,1,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","ACCCATGCTAAGAATA",8,60.11,10.83,-0.01,0.08,2.98,1.05,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","ACCCATGCTAAGGGTT",4,3.7,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","ACCCATGCTACAATAA",4,20.76,10.56,-0.28,0.1,2.94,1,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","ACCCATGGAGCCTTTA",6,98.92,8.98,-1.86,0.05,2.82,1.04,0,">1 nonsynonymous","Y39M T63P G117T",3
"lib2","SARS-CoV-2","ACCCATGGCGTTATCA",6,161.43,10.86,0.02,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCATGTACCCGATT",14,126.14,9.32,-1.51,0.06,1.98,1.07,0,">1 nonsynonymous","F47S D59C K87R T201R",4
"lib2","SARS-CoV-2","ACCCATGTCCCGATAA",9,106.58,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y39S L60T G86L G152T",4
"lib2","SARS-CoV-2","ACCCATTAAAAGATAT",5,77.12,10.84,0,0.08,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCATTAACACCGCA",15,66.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L95R T100G",2
"lib2","SARS-CoV-2","ACCCATTGCATATGCA",5,67.22,6.95,-3.89,0.14,1.5,1.06,0,">1 nonsynonymous","K94E G116P",2
"lib2","SARS-CoV-2","ACCCATTTAACATGTA",4,59.98,10.81,-0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCATTTCCGTTCAA",2,12.75,8.1,-2.74,0.43,1.98,1.35,0.06,">1 nonsynonymous","N157L G174R",2
"lib2","SARS-CoV-2","ACCCCAAAAGGGACAT",3,55.59,10.7,-0.13,0.05,2.97,1.03,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","ACCCCAAAGATACCAT",4,52.04,10.77,-0.07,0.05,2.94,1.08,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","ACCCCAAATCCAGACT",6,52.55,10.73,-0.11,0.05,2.91,1.11,0,"1 nonsynonymous","F62A",1
"lib2","SARS-CoV-2","ACCCCAACGCGAAAAG",3,42.04,9.31,-1.52,0.17,1.62,1.21,0.01,">1 nonsynonymous","T3V V11F W106V",3
"lib2","SARS-CoV-2","ACCCCAACTCAACTCA",5,25.73,7.16,-3.68,0.29,1.5,1.09,0.03,">1 nonsynonymous","S41R G86R",2
"lib2","SARS-CoV-2","ACCCCAAGACAAGATG",6,326.37,10.19,-0.64,0.02,2.89,1.05,0,">1 nonsynonymous","A42M Q176M",2
"lib2","SARS-CoV-2","ACCCCAAGACTAATAA",8,121.83,10.27,-0.57,0.03,2.92,1.02,0,">1 nonsynonymous","F12V S129V",2
"lib2","SARS-CoV-2","ACCCCAAGCACCTTAC",2,69.85,9.95,-0.89,0.06,2.02,1.1,0,">1 nonsynonymous","T100M W106S N151H",3
"lib2","SARS-CoV-2","ACCCCAAGTAATGTCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44S K56W E141M E154K",4
"lib2","SARS-CoV-2","ACCCCAAGTCTAATAA",1,1.28,NA,NA,NA,NA,NA,NA,"stop","A18E V71* A145R C150I E154M",5
"lib2","SARS-CoV-2","ACCCCAATGATTCCAT",1,50.57,9.27,-1.56,0.05,2.94,1.05,0,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","ACCCCACAAATCATAG",1,6.91,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","T3L Y91K N109L L125P A145S",5
"lib2","SARS-CoV-2","ACCCCACAATTAGTAG",3,31.27,10.84,0.01,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCCACACTCTTACC",4,27.3,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A81E L131K I142A H189T",4
"lib2","SARS-CoV-2","ACCCCACATATTAATT",1,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70I N92L",2
"lib2","SARS-CoV-2","ACCCCACATTTTTTAT",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A K128S Q176V",3
"lib2","SARS-CoV-2","ACCCCACCAAGCCCTA",5,7.43,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N1C L57E Y93K Y121W T201S",5
"lib2","SARS-CoV-2","ACCCCACCTTTTAACT",11,2.2,NA,NA,NA,NA,NA,NA,"stop","N13* A22P C61V A81Y",4
"lib2","SARS-CoV-2","ACCCCACGAATATATG",2,69.56,10.2,-0.64,0.03,2.83,1.04,0,"1 nonsynonymous","R127S",1
"lib2","SARS-CoV-2","ACCCCACGGGAATGTA",5,76.49,10.75,-0.08,0.02,2.94,1.07,0,"1 nonsynonymous","F62H",1
"lib2","SARS-CoV-2","ACCCCACTCGAGACCG",3,15.03,NA,NA,NA,NA,NA,NA,"stop","N1* F44I T85L V103Q I138Q",5
"lib2","SARS-CoV-2","ACCCCAGACGAGTATA",2,55.87,10.02,-0.82,0.1,2.43,1.09,0,">1 nonsynonymous","Y39S F99L S184V",3
"lib2","SARS-CoV-2","ACCCCAGAGCTATTAC",3,55.2,10.82,-0.02,0.04,3,1.01,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","ACCCCAGCGAATCGCA",1,44.71,8.81,-2.03,0.11,2.01,1.09,0,">1 nonsynonymous","C61W G83R K128L Q144R N171S",5
"lib2","SARS-CoV-2","ACCCCAGCGCAATTGC",5,1.04,NA,NA,NA,NA,NA,NA,"stop","Y121S K199*",2
"lib2","SARS-CoV-2","ACCCCAGCGGGATATA",2,8.28,10.55,-0.29,0.19,2.53,1.37,0.02,">1 nonsynonymous","T63L D98N K128A",3
"lib2","SARS-CoV-2","ACCCCAGTACCTAGCT",17,25.64,NA,NA,NA,NA,NA,NA,"stop","Y21K R27K L38F C61Y D68N D98K D112* Y119V T201M",9
"lib2","SARS-CoV-2","ACCCCAGTGGAAAGAT",3,41.7,10.85,0.01,0.08,2.93,1.09,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","ACCCCAGTGTATGCTA",3,64.31,9.95,-0.88,0.07,2.46,1,0,">1 nonsynonymous","S45L A105F",2
"lib2","SARS-CoV-2","ACCCCAGTTTGCCACT",3,54.03,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R127K C158S",2
"lib2","SARS-CoV-2","ACCCCATATCCGAACT",12,88.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46L D75Y P82D N92G Y121S",5
"lib2","SARS-CoV-2","ACCCCATGAATCAGAC",5,38.05,7.68,-3.16,0.24,1.5,1.16,0.02,">1 nonsynonymous","N40F T63L Q84K I142H E154D",5
"lib2","SARS-CoV-2","ACCCCATGTACATTTT",5,40.98,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V37N L60R F167D",3
"lib2","SARS-CoV-2","ACCCCATTAAATAGAA",3,24.57,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","N107D R127C",2
"lib2","SARS-CoV-2","ACCCCATTAACTTATG",1,72.54,10.01,-0.83,0.08,2.64,1.07,0,">1 nonsynonymous","P7E S36F G152Y",3
"lib2","SARS-CoV-2","ACCCCATTTAGAGAAA",10,23.27,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A42T K94Y V103C T201G",4
"lib2","SARS-CoV-2","ACCCCCAAGTCAACGA",6,77.98,6,-4.84,1.3,1.5,1.12,0.01,">1 nonsynonymous","K56L G86I D98V",3
"lib2","SARS-CoV-2","ACCCCCACAGTGTTAA",7,0.28,NA,NA,NA,NA,NA,NA,"stop","V77C Y119L E135M K198*",4
"lib2","SARS-CoV-2","ACCCCCAGGACCATTT",18,121.19,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","G51Y N64L R136W",3
"lib2","SARS-CoV-2","ACCCCCAGGCTTTTTA",11,6.62,NA,NA,NA,NA,NA,NA,"stop","T15A I138* F156L",3
"lib2","SARS-CoV-2","ACCCCCATGAGAGGAT",4,87.39,10.01,-0.83,0.05,2.82,1.05,0,">1 nonsynonymous","Y35A A42S E141T V173A",4
"lib2","SARS-CoV-2","ACCCCCCCAACCTTGT",2,28.79,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","S113K E141S P149G Q163S V173Q",5
"lib2","SARS-CoV-2","ACCCCCCCAAGTAGAT",11,179.72,10.82,-0.02,0.04,2.9,1.1,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","ACCCCCCGAACAGTAT",4,23.48,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","V181K",1
"lib2","SARS-CoV-2","ACCCCCCTGCAATCGA",5,27.33,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6Y C49E G86S N92R",4
"lib2","SARS-CoV-2","ACCCCCGATTACCATA",1,36.12,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N4M E10Y D59K V103F",4
"lib2","SARS-CoV-2","ACCCCCGCTTGCCACA",1,2.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100R",1
"lib2","SARS-CoV-2","ACCCCCGGCACTCAAT",14,219.7,8.62,-2.22,0.07,2.38,1.07,0,">1 nonsynonymous","Y91S L125P",2
"lib2","SARS-CoV-2","ACCCCCGTAACCTCGC",4,2.85,NA,NA,NA,NA,NA,NA,"stop","N4* Y66S",2
"lib2","SARS-CoV-2","ACCCCCGTTGAGGGCC",9,51.15,6.61,-4.23,0.59,1.5,1.15,0.04,">1 nonsynonymous","K94L V103A",2
"lib2","SARS-CoV-2","ACCCCCGTTGTATTAC",3,32.3,6,-4.84,2,3,1.05,0,">1 nonsynonymous","F17K S108E",2
"lib2","SARS-CoV-2","ACCCCCTAATGTATCT",5,66.92,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T140N A145C Y175I P197Y",4
"lib2","SARS-CoV-2","ACCCCCTCTAAAATTA",6,11.33,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","W23R D90V C158Y T201D",4
"lib2","SARS-CoV-2","ACCCCCTGGGTCAGAA",3,106.57,10.47,-0.37,0.04,2.93,1.02,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","ACCCCCTTCAATCTAG",14,71.92,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","F44H S108P G116L E141S T148E P191I",6
"lib2","SARS-CoV-2","ACCCCCTTGGACCTAG",4,110.73,10.24,-0.59,0.03,2.97,1.04,0,">1 nonsynonymous","S41N T55Q E154I",3
"lib2","SARS-CoV-2","ACCCCCTTTGAACAAC",9,139.74,10.89,0.05,0.05,2.89,1.08,0,">1 nonsynonymous","S53N E154T K199Y",3
"lib2","SARS-CoV-2","ACCCCGAGAACGTACT",5,17.26,8.41,-2.43,0.09,1.96,1.02,0,"1 nonsynonymous","F167M",1
"lib2","SARS-CoV-2","ACCCCGAGCTAGCGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91M I142F K198C",3
"lib2","SARS-CoV-2","ACCCCGAGGATGGTAC",2,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V L95P T140K",3
"lib2","SARS-CoV-2","ACCCCGAGGCCTTAAA",7,228.06,10.83,0,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCCGAGTTTGGAAT",2,17.15,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C61L A105T D137A",3
"lib2","SARS-CoV-2","ACCCCGATGCACAACG",7,113.36,10.8,-0.03,0.03,3,1.01,0,"1 nonsynonymous","D98E",1
"lib2","SARS-CoV-2","ACCCCGATTATATCGC",6,52.42,9.54,-1.3,0.12,1.95,1.04,0.01,">1 nonsynonymous","F44L D90V N130S",3
"lib2","SARS-CoV-2","ACCCCGCAAATTAAAT",1,8.36,9.68,-1.16,0.15,1.92,1,0,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","ACCCCGCACAGTAATA",1,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131F",1
"lib2","SARS-CoV-2","ACCCCGCATTAACAAG",2,34.23,9.97,-0.86,0.1,2.17,1.03,0.01,">1 nonsynonymous","A22V N64M N110K I138L",4
"lib2","SARS-CoV-2","ACCCCGCCCAGCGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R N130G T148F",3
"lib2","SARS-CoV-2","ACCCCGCGACACTTGA",2,30.32,10.27,-0.56,0.11,2.81,1,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","ACCCCGGAGCGCAGCC",8,76.1,10.87,0.04,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCCGGCGCCACCCA",7,0,NA,NA,NA,NA,NA,NA,"stop","N13C W23R S41D Y91R F167*",5
"lib2","SARS-CoV-2","ACCCCGGCTCATAGAA",5,54.77,10.67,-0.17,0.03,2.97,1.04,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","ACCCCGTGAGAAAAAA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","N64T V77*",2
"lib2","SARS-CoV-2","ACCCCGTTCGCTATCA",6,42.65,6,-4.84,1.71,1.5,1.11,0.01,">1 nonsynonymous","N4W S53R S129Y E141V Q168L",5
"lib2","SARS-CoV-2","ACCCCTAAACAAAGAA",6,48,10.86,0.02,0.06,2.92,1.07,0,"1 nonsynonymous","A192H",1
"lib2","SARS-CoV-2","ACCCCTAAACGAGTAT",14,30.32,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F99V V182P",2
"lib2","SARS-CoV-2","ACCCCTAACCGTGCGT",3,9.26,6.45,-4.38,1.47,1.5,1.05,0.03,">1 nonsynonymous","V65M I72K",2
"lib2","SARS-CoV-2","ACCCCTAAGAACTAAA",7,95.87,8.15,-2.69,0.22,1.5,1.13,0.02,">1 nonsynonymous","V20P P96A W106Y N171S S184I",5
"lib2","SARS-CoV-2","ACCCCTACAGGGGGTT",5,42.11,9.79,-1.05,0.1,2.06,1.01,0,">1 nonsynonymous","Y35L F62S W106R G152A",4
"lib2","SARS-CoV-2","ACCCCTACTAAGTTAC",2,39.54,9.6,-1.23,0.1,2.24,1.1,0,">1 nonsynonymous","A33E K56I",2
"lib2","SARS-CoV-2","ACCCCTATAAGACCGA",15,382.59,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C150I Y175M",2
"lib2","SARS-CoV-2","ACCCCTATATCTCGAA",3,41.01,6,-4.84,2,3,1.22,0,">1 nonsynonymous","I2A G86F N118L",3
"lib2","SARS-CoV-2","ACCCCTATCCGGTCCA",7,117.74,10.51,-0.33,0.04,2.96,1.04,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","ACCCCTATTCTCATAC",5,1.11,NA,NA,NA,NA,NA,NA,"stop","N58* T201E",2
"lib2","SARS-CoV-2","ACCCCTCAAGTAAACG",9,184.38,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I80T S113Q Q176S",3
"lib2","SARS-CoV-2","ACCCCTCATGATCTAT",6,7.13,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","N1H C61T I104P",3
"lib2","SARS-CoV-2","ACCCCTCGAGCGCTGA",5,3.09,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib2","SARS-CoV-2","ACCCCTCTAACCGTCC",12,134.83,6.48,-4.36,0.26,1.5,1.16,0.01,">1 nonsynonymous","G86D E141V G174R",3
"lib2","SARS-CoV-2","ACCCCTGAAAAGTGAG",2,40.37,9.16,-1.68,0.07,2.19,1.02,0,">1 nonsynonymous","S53G N107A G116E",3
"lib2","SARS-CoV-2","ACCCCTGCACGGATTA",4,60.99,10.18,-0.66,0.08,2.78,1.12,0,">1 nonsynonymous","F44Q K114L",2
"lib2","SARS-CoV-2","ACCCCTGCCTATTCTC",5,0.6,NA,NA,NA,NA,NA,NA,"stop","N64R V71L I138S T201*",4
"lib2","SARS-CoV-2","ACCCCTGCTCTACACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M V37G K94W V103A K114E",5
"lib2","SARS-CoV-2","ACCCCTTAACCTCGCA",4,1.3,NA,NA,NA,NA,NA,NA,"stop","L5S A42T G51A K87* W106V I138F T148K C195S",8
"lib2","SARS-CoV-2","ACCCCTTACATATTAA",1,7.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49G Y119T E141R",3
"lib2","SARS-CoV-2","ACCCCTTATCAAGCCT",1,87.03,9.61,-1.23,0.09,2.62,1.03,0,">1 nonsynonymous","F44C T100L G116T",3
"lib2","SARS-CoV-2","ACCCCTTTATCCCCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43I P54H W106* Y121* Q144M V173S",6
"lib2","SARS-CoV-2","ACCCCTTTCAACCCCG",3,24.79,9.33,-1.51,0.09,2.25,1.04,0,">1 nonsynonymous","G9M I28G K87M K128Y",4
"lib2","SARS-CoV-2","ACCCGAAAAAGCAGGT",2,97.94,10.66,-0.17,0.03,2.98,1.04,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","ACCCGAAAAGAACTAG",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R R136W V181R",3
"lib2","SARS-CoV-2","ACCCGAAAATATTCAA",10,0.21,NA,NA,NA,NA,NA,NA,"stop","N4A P82V S113*",3
"lib2","SARS-CoV-2","ACCCGAAACAGGGCGC",2,45.05,10.7,-0.13,0.06,2.92,1.03,0,">1 nonsynonymous","G9Q C61N V77L",3
"lib2","SARS-CoV-2","ACCCGAAACGATGTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27G L131T G174I",3
"lib2","SARS-CoV-2","ACCCGAACCTACCGAT",8,49.24,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R27G D90S R127F N151L F156P",5
"lib2","SARS-CoV-2","ACCCGAACGATTAGAA",4,9.53,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","S19L Y91L R136D A192V",4
"lib2","SARS-CoV-2","ACCCGAACTATTGCGG",3,70.69,10.75,-0.08,0.04,2.97,1.05,0,">1 nonsynonymous","D59A T201L",2
"lib2","SARS-CoV-2","ACCCGAACTCAAAAAA",13,320.46,9.57,-1.27,0.07,2.81,1.12,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","ACCCGAAGACACCTCC",8,87.44,10.73,-0.11,0.06,2.86,1.15,0,"1 nonsynonymous","R78A",1
"lib2","SARS-CoV-2","ACCCGAATAGAGCATG",7,38.74,6,-4.84,2,1.5,1.4,0.05,">1 nonsynonymous","T46A A81N N118T L183S K198P T201K",6
"lib2","SARS-CoV-2","ACCCGACAAATTTCAA",7,57.61,10.74,-0.1,0.09,2.87,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCGACCCGCAAAAT",6,104.81,10.52,-0.32,0.05,2.8,1.13,0,">1 nonsynonymous","G9A L162M",2
"lib2","SARS-CoV-2","ACCCGACCTAATATAG",5,47.89,6.1,-4.74,0.93,1.5,1.19,0.02,">1 nonsynonymous","K48P K87L D98L E154V",4
"lib2","SARS-CoV-2","ACCCGACCTACAGCAA",1,6.26,10.68,-0.16,0.09,2.62,1.41,0,"1 nonsynonymous","R78T",1
"lib2","SARS-CoV-2","ACCCGACTGAACACAA",4,118.05,10.83,-0.01,0.05,2.84,1.08,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","ACCCGACTGTTTGTTT",9,61.73,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L38R W106C E186K",3
"lib2","SARS-CoV-2","ACCCGAGCATTTAACG",2,39.2,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F99T D112V N118H R136S",4
"lib2","SARS-CoV-2","ACCCGAGCTCTATAAC",1,9.03,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","D112R V173E",2
"lib2","SARS-CoV-2","ACCCGAGTATGGATTT",2,33.26,10.16,-0.68,0.12,2.43,1.03,0.01,">1 nonsynonymous","N58S V173S",2
"lib2","SARS-CoV-2","ACCCGAGTCGATAAAG",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37H Y123P",2
"lib2","SARS-CoV-2","ACCCGAGTGATGAGAT",6,1.02,NA,NA,NA,NA,NA,NA,"stop","D34P G101Y K128*",3
"lib2","SARS-CoV-2","ACCCGAGTGGTCTGGT",8,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K Y119V R127A Q144L",4
"lib2","SARS-CoV-2","ACCCGATGCTCTCCCA",7,3.12,NA,NA,NA,NA,NA,NA,"stop","G83N N92* N157S K198T",4
"lib2","SARS-CoV-2","ACCCGATTAATAAAGT",13,56.11,10.24,-0.6,0.06,2.91,1.05,0,">1 nonsynonymous","K87S N120S T148M",3
"lib2","SARS-CoV-2","ACCCGATTGACCAAAG",1,11.27,10.48,-0.35,0.04,3,1.01,0,">1 nonsynonymous","Q84C T100K",2
"lib2","SARS-CoV-2","ACCCGATTGTTACGGA",12,185.74,10.65,-0.19,0.04,2.91,1.09,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","ACCCGATTTACACTAT",7,9.41,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41R C49S Y178S C195F",4
"lib2","SARS-CoV-2","ACCCGATTTATGCCTA",22,167.69,9,-1.84,0.11,1.63,1.1,0,">1 nonsynonymous","C61L A105V V115T S129F",4
"lib2","SARS-CoV-2","ACCCGATTTTTGCGCT",8,2.21,NA,NA,NA,NA,NA,NA,"stop","K56Q Y121T Y175*",3
"lib2","SARS-CoV-2","ACCCGCAAATAGTCGC",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65P D90M",2
"lib2","SARS-CoV-2","ACCCGCAAATCTAAGT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V D98H",2
"lib2","SARS-CoV-2","ACCCGCAAATTGCGAA",2,5.38,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","R179E",1
"lib2","SARS-CoV-2","ACCCGCACCGACAACA",8,144.9,10.87,0.03,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCGCAGCTGTGGCC",10,51.64,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C49L G86S F99I",3
"lib2","SARS-CoV-2","ACCCGCCAATAGGGAT",3,49.17,10.05,-0.78,0.06,2.75,1.11,0,">1 nonsynonymous","Q79H L188H",2
"lib2","SARS-CoV-2","ACCCGCCCATAACGGA",8,40.32,6.53,-4.31,0.34,1.5,1.18,0.01,">1 nonsynonymous","Y91I C102L S129Y",3
"lib2","SARS-CoV-2","ACCCGCGAACTCTTTC",6,51.65,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","K114M V180R",2
"lib2","SARS-CoV-2","ACCCGCGATTGCCAAA",9,152.89,10.09,-0.74,0.06,2.74,1.05,0,">1 nonsynonymous","F17M S139N",2
"lib2","SARS-CoV-2","ACCCGCTCCCTAGACC",1,5.69,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","K48M P82S T85S K128E",4
"lib2","SARS-CoV-2","ACCCGCTGATTACTTA",10,141.35,6,-4.84,1.19,1.5,1.28,0.02,">1 nonsynonymous","K56E S69L S129L G174L E186H",5
"lib2","SARS-CoV-2","ACCCGCTGCAGCATAT",5,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54A V103R G146V S200K",4
"lib2","SARS-CoV-2","ACCCGGAAATATCCGG",2,30.1,10.07,-0.77,0.1,2.68,1.05,0,">1 nonsynonymous","W23F F47Y",2
"lib2","SARS-CoV-2","ACCCGGAACCAAAACG",9,98.52,6.29,-4.55,0.38,1.5,1.11,0.01,">1 nonsynonymous","D34W R124C K128Q P149G",4
"lib2","SARS-CoV-2","ACCCGGAATTCTAATT",2,66.61,6.69,-4.15,0.39,1.5,1.14,0.02,">1 nonsynonymous","T46R G146M Q168N T201K",4
"lib2","SARS-CoV-2","ACCCGGACTGATACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","F70E T100N A192*",3
"lib2","SARS-CoV-2","ACCCGGATTGTACAAG",1,15.7,7.51,-3.32,0.19,1.76,1.05,0.01,">1 nonsynonymous","N92S V115M G116A I138N",4
"lib2","SARS-CoV-2","ACCCGGTACATAAGCA",3,29.39,10.06,-0.77,0.04,2.78,1.04,0,">1 nonsynonymous","S43V N107R",2
"lib2","SARS-CoV-2","ACCCGGTGACTCACAA",11,193,6,-4.84,1.92,1.5,1.13,0.01,">1 nonsynonymous","Y121K D137Y",2
"lib2","SARS-CoV-2","ACCCGTAAAAAATTAA",2,17.86,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L95T S113H",2
"lib2","SARS-CoV-2","ACCCGTAAAATCATGA",1,38.18,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","L60A V77N D112T F160P",4
"lib2","SARS-CoV-2","ACCCGTACAAATAAGG",2,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P N92F",2
"lib2","SARS-CoV-2","ACCCGTACTGTTAACA",5,49.12,8.83,-2.01,0.14,1.87,1.12,0.01,">1 nonsynonymous","C6R R27E Q144H",3
"lib2","SARS-CoV-2","ACCCGTATAAATGCGA",1,83.27,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F44K G172V",2
"lib2","SARS-CoV-2","ACCCGTATAACCCTTA",1,40.94,9.8,-1.03,0.09,2.18,1.09,0,">1 nonsynonymous","Y121N E141V",2
"lib2","SARS-CoV-2","ACCCGTATCTGAGAAA",3,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y C49Y L111A",3
"lib2","SARS-CoV-2","ACCCGTATGAGCATTA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","I2A E76* D137L",3
"lib2","SARS-CoV-2","ACCCGTCAATTCCCAG",10,0.09,NA,NA,NA,NA,NA,NA,"stop","Y123* T140I R179Y",3
"lib2","SARS-CoV-2","ACCCGTCTTCCACGCT",1,14.61,6,-4.84,2,3,1.13,0.02,">1 nonsynonymous","G86L G152V",2
"lib2","SARS-CoV-2","ACCCGTGAATCGCAGT",29,203.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1L G51F C61F N120T P149V",5
"lib2","SARS-CoV-2","ACCCGTGGGGTGCAAA",1,15.68,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","V65P R127I",2
"lib2","SARS-CoV-2","ACCCGTTGCGTTTGTA",4,26.14,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15W N64I G83I T100I Y143G",5
"lib2","SARS-CoV-2","ACCCGTTTAAGGGCCG",12,78.34,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","Y91E I104T F160L",3
"lib2","SARS-CoV-2","ACCCGTTTGATCTTGT",2,13.21,9.09,-1.75,0.42,1.65,1.13,0.07,">1 nonsynonymous","D68L Y91N V103L G155F",4
"lib2","SARS-CoV-2","ACCCTAAAAATTCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2R D112P R136N P161*",4
"lib2","SARS-CoV-2","ACCCTAAACCTTTTAT",6,2.15,NA,NA,NA,NA,NA,NA,"stop","I104T S113L P133N E141S N151S T201*",6
"lib2","SARS-CoV-2","ACCCTAAACGCAGTGA",3,31.67,10.83,0,0.07,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCTAAATGAAAAAC",7,35.52,10.85,0.01,0.06,3,1.03,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","ACCCTAACTAAAATCA",1,17.73,10.74,-0.1,0.06,2.88,1.12,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","ACCCTAAGAAAGCTGA",2,54.17,10.13,-0.71,0.07,2.76,1.03,0,">1 nonsynonymous","L5M A33Q D98L F160Q",4
"lib2","SARS-CoV-2","ACCCTAAGTCACCAAA",2,7.81,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","D34Y V71I R127L P149E",4
"lib2","SARS-CoV-2","ACCCTAAGTTGATCAA",6,92.69,10.23,-0.6,0.04,2.86,1.05,0,">1 nonsynonymous","F44K V173F",2
"lib2","SARS-CoV-2","ACCCTAATACCTCCTA",3,21.8,9.98,-0.86,0.1,2.03,1.05,0,"1 nonsynonymous","Q84P",1
"lib2","SARS-CoV-2","ACCCTAATTAGTTACA",1,2.52,NA,NA,NA,NA,NA,NA,"stop","K48V L60T L122* T148E G166I",5
"lib2","SARS-CoV-2","ACCCTAATTGCCATTA",5,51.54,10.65,-0.18,0.06,2.93,1.01,0,"1 nonsynonymous","G9I",1
"lib2","SARS-CoV-2","ACCCTACACCGTTAAA",2,7.63,10.38,-0.45,0.03,2.98,1,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","ACCCTACAGGGTAACG",31,633.79,8.31,-2.53,0.11,2.45,1.06,0,">1 nonsynonymous","C61M S113V T140M",3
"lib2","SARS-CoV-2","ACCCTACATCACAAAC",16,214.44,10.72,-0.11,0.03,2.95,1.06,0,">1 nonsynonymous","N4F P197R",2
"lib2","SARS-CoV-2","ACCCTACCACAACCTA",7,113.32,7.77,-3.06,0.13,1.5,1.15,0.01,">1 nonsynonymous","P7L A14C Y35C N120V",4
"lib2","SARS-CoV-2","ACCCTACCACTATTTC",1,10.57,9.55,-1.29,0.33,1.5,1,0.06,">1 nonsynonymous","G51E A105W L122G",3
"lib2","SARS-CoV-2","ACCCTACCTATCCTAT",2,13.71,9.43,-1.41,0.36,1.76,1.12,0.05,">1 nonsynonymous","G83A P96S V181P",3
"lib2","SARS-CoV-2","ACCCTACGAAGAACAA",16,1.47,NA,NA,NA,NA,NA,NA,"stop","N13V S29L S45N D68K S108* D112T",6
"lib2","SARS-CoV-2","ACCCTACGACATGCCT",4,82.1,10.58,-0.25,0.07,2.9,1.09,0,">1 nonsynonymous","T15K S36T",2
"lib2","SARS-CoV-2","ACCCTACGCCGCGCCC",3,52.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S43N K48A V103C S139I P149R",5
"lib2","SARS-CoV-2","ACCCTACGTGCCATCG",5,0.63,NA,NA,NA,NA,NA,NA,"stop","L5N T55E I80R T100Q L111*",5
"lib2","SARS-CoV-2","ACCCTACTCCTAGTAA",9,0,NA,NA,NA,NA,NA,NA,"stop","D68* F160T",2
"lib2","SARS-CoV-2","ACCCTAGACACCAAAC",5,55.29,10.76,-0.07,0.03,2.95,1.07,0,">1 nonsynonymous","S36N L60Y T100H",3
"lib2","SARS-CoV-2","ACCCTAGACATACGCA",1,2.29,NA,NA,NA,NA,NA,NA,"stop","G9R K56* D90M P96T S113H T140M",6
"lib2","SARS-CoV-2","ACCCTAGATAAATCAT",13,91.68,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N107L Y121S E141I F156C",4
"lib2","SARS-CoV-2","ACCCTAGATAACGAAT",9,86.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68V K94V Y143S",3
"lib2","SARS-CoV-2","ACCCTAGCAACATTCA",9,3.82,NA,NA,NA,NA,NA,NA,"stop","D34E T100*",2
"lib2","SARS-CoV-2","ACCCTAGCAGGACATA",8,41.13,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y39G F70Q A81F L95T",4
"lib2","SARS-CoV-2","ACCCTAGGGCGACAAT",8,19.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y35P C49L R127A",3
"lib2","SARS-CoV-2","ACCCTAGGTCTCGGAT",9,176.11,10.15,-0.69,0.06,2.74,1.01,0,">1 nonsynonymous","E10A V37P N64T D90L",4
"lib2","SARS-CoV-2","ACCCTAGTAACAAGTA",5,62.56,10.2,-0.64,0.07,2.73,1.14,0,">1 nonsynonymous","R16V R27P L122T K132I T148I",5
"lib2","SARS-CoV-2","ACCCTAGTGATAATTG",2,7.41,9.17,-1.67,0.39,1.54,1.15,0.04,">1 nonsynonymous","A18L D34W",2
"lib2","SARS-CoV-2","ACCCTATAAAGTCACG",9,152.42,8.7,-2.13,0.09,2.14,1.09,0,">1 nonsynonymous","E10F V32S P149T G174R",4
"lib2","SARS-CoV-2","ACCCTATACATGCAGC",4,110.25,8.32,-2.52,0.09,2.48,1.09,0,">1 nonsynonymous","G74Q N120T",2
"lib2","SARS-CoV-2","ACCCTATGAATTATAA",11,305.32,10.62,-0.22,0.03,2.87,1.07,0,">1 nonsynonymous","T3M A33Y I80L",3
"lib2","SARS-CoV-2","ACCCTATGGACTAGAA",4,44.77,6.47,-4.37,0.4,1.5,1.16,0.01,">1 nonsynonymous","Y39G L95M Y143S",3
"lib2","SARS-CoV-2","ACCCTATTAAACTCCG",10,130.05,9.79,-1.04,0.08,2.29,1.13,0,"1 nonsynonymous","F8T",1
"lib2","SARS-CoV-2","ACCCTATTAAACTGCA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","D97* V153L T170V Y178V",4
"lib2","SARS-CoV-2","ACCCTCAATAAGCTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D34* V173S",2
"lib2","SARS-CoV-2","ACCCTCAATTTAACAC",1,13.73,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S29A N120G F156M Q168V Y175A",5
"lib2","SARS-CoV-2","ACCCTCAGGCTTAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","F8Q L60*",2
"lib2","SARS-CoV-2","ACCCTCATATTTCCTA",8,34.58,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T3A S45L Y50I P149T",4
"lib2","SARS-CoV-2","ACCCTCATGAACAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R N64D D97M",3
"lib2","SARS-CoV-2","ACCCTCCAAATGCATA",10,169,10.23,-0.61,0.03,2.94,1.07,0,">1 nonsynonymous","Y35L G155D",2
"lib2","SARS-CoV-2","ACCCTCCCCCGATCTT",3,53.1,10.75,-0.08,0.05,2.91,1.05,0,"1 nonsynonymous","L60N",1
"lib2","SARS-CoV-2","ACCCTCCGAACCAAAT",2,53.58,6.24,-4.6,0.7,1.5,1.14,0.02,">1 nonsynonymous","S19R N24D V52F D59F P169K",5
"lib2","SARS-CoV-2","ACCCTCGCCACAGGTC",9,75.09,6.98,-3.86,0.17,1.5,1.13,0.01,">1 nonsynonymous","I72L Y123Q G152V",3
"lib2","SARS-CoV-2","ACCCTCGCCTTACTAT",2,11.98,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G9E L95S T148N Q176I V181T",5
"lib2","SARS-CoV-2","ACCCTCGCTGATGTGT",2,23.26,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K94I N107C",2
"lib2","SARS-CoV-2","ACCCTCGTACTCGCCA",1,48.02,10.78,-0.06,0.06,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCTCTAAGAAGATT",3,35.61,10.66,-0.18,0.08,2.91,1.1,0,"1 nonsynonymous","S164F",1
"lib2","SARS-CoV-2","ACCCTCTAAGCGCTAG",1,1.39,NA,NA,NA,NA,NA,NA,"stop","S36* Q84W S129C",3
"lib2","SARS-CoV-2","ACCCTCTATAAAGCAT",7,88.92,9.76,-1.08,0.09,2.08,1.05,0,">1 nonsynonymous","A14F S147L",2
"lib2","SARS-CoV-2","ACCCTCTATGCGGTAT",1,18.19,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I80T D98T E135S P177T",4
"lib2","SARS-CoV-2","ACCCTCTCACCTACTT",7,4.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","ACCCTCTCCCGGGCTA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56V D90P V103K F185R",4
"lib2","SARS-CoV-2","ACCCTCTTCATGCGGG",2,5.38,6.66,-4.18,0.58,2.33,1.1,0.03,">1 nonsynonymous","A33T L60F R124S Q144L A190N",5
"lib2","SARS-CoV-2","ACCCTGAACATGTAAC",2,22.16,9.32,-1.52,0.28,1.5,1.1,0.06,">1 nonsynonymous","D75Q P82F K199I",3
"lib2","SARS-CoV-2","ACCCTGACATTTTTGT",4,44.8,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","P7S T55N F99Y S129T G172S",5
"lib2","SARS-CoV-2","ACCCTGACTAAATATT",10,139.45,9.25,-1.59,0.06,1.89,1.09,0,">1 nonsynonymous","S41L T46Q V77R K114T",4
"lib2","SARS-CoV-2","ACCCTGACTCAATAAG",9,222.89,6.63,-4.21,0.34,1.5,1.17,0.02,">1 nonsynonymous","C6S F12L Q176S",3
"lib2","SARS-CoV-2","ACCCTGAGAGCATCCC",8,155.49,10.84,0,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCTGAGCTATATAA",5,0.03,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib2","SARS-CoV-2","ACCCTGATGATGCTAA",2,21.81,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","F47Y F99V R124T F156A",4
"lib2","SARS-CoV-2","ACCCTGCCACAACACA",4,49.66,10.8,-0.04,0.05,2.95,1,0,"1 nonsynonymous","R27M",1
"lib2","SARS-CoV-2","ACCCTGCCTGAGCCGA",4,33.2,8.31,-2.53,0.13,1.88,1.04,0.01,">1 nonsynonymous","N4I V37A F44M C61V G83Q K87Q",6
"lib2","SARS-CoV-2","ACCCTGCGGATGGATA",7,140.23,10.28,-0.56,0.03,2.87,1.07,0,">1 nonsynonymous","F44S Q84T",2
"lib2","SARS-CoV-2","ACCCTGCTATACTGCG",13,216.93,10.7,-0.14,0.04,2.93,1.09,0,">1 nonsynonymous","N58K T201S",2
"lib2","SARS-CoV-2","ACCCTGGAATCAAGAT",9,58.54,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V52R D68Q L95P R127C V153I G196A",6
"lib2","SARS-CoV-2","ACCCTGTAACACACGA",2,42.49,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T100L N107K Y123G",3
"lib2","SARS-CoV-2","ACCCTGTATATCAAAT",8,67.52,10.47,-0.36,0.05,2.88,1.07,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","ACCCTGTCAAGGATAA",5,44.53,10.88,0.04,0.05,2.99,1.03,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","ACCCTGTTGCCATCAG",3,57.51,8.83,-2,0.1,1.77,1.17,0,">1 nonsynonymous","T46L I142A S184R",3
"lib2","SARS-CoV-2","ACCCTTAAATAAACAA",4,41.29,8.32,-2.52,0.23,1.5,1,0.02,">1 nonsynonymous","S43L L57F T63N T85F G152C",5
"lib2","SARS-CoV-2","ACCCTTAACCTGACAA",1,19.26,9.89,-0.95,0.15,2.13,1.02,0.01,">1 nonsynonymous","S29Q K94M",2
"lib2","SARS-CoV-2","ACCCTTAATACCAGAT",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K V37A G155T",3
"lib2","SARS-CoV-2","ACCCTTAATTATCAAT",13,173.39,8.56,-2.27,0.08,2.03,1.1,0,">1 nonsynonymous","F17L Y119H E141S",3
"lib2","SARS-CoV-2","ACCCTTACCGACATAT",6,16.84,6.19,-4.65,0.56,3,1.16,0.01,">1 nonsynonymous","G9H Y66P L95V E135M",4
"lib2","SARS-CoV-2","ACCCTTACTATTACAC",10,99.24,10.83,0,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCCTTATACGCATGC",3,17.21,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","N13C D68V E141M Q176R",4
"lib2","SARS-CoV-2","ACCCTTATATGCTAAT",9,97.71,8.17,-2.67,0.16,1.99,1.07,0.01,">1 nonsynonymous","Q84S E135C Y143V",3
"lib2","SARS-CoV-2","ACCCTTCCAACAAGTG",3,27.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6L A81V Q176R",3
"lib2","SARS-CoV-2","ACCCTTCCCGAACTAA",3,9.58,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6V L60Y G101R G172Y",4
"lib2","SARS-CoV-2","ACCCTTCCGACGCAAT",2,10.73,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","Y50V L57P",2
"lib2","SARS-CoV-2","ACCCTTCGCACACGCT",8,98.27,7.94,-2.9,0.16,1.5,1.18,0.01,">1 nonsynonymous","R78N P96L G152N",3
"lib2","SARS-CoV-2","ACCCTTCGTAAGGGCT",3,30.49,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C6R Y93S",2
"lib2","SARS-CoV-2","ACCCTTCTATATGCAT",4,45.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6D F12T Y39G P96Y Y121L G172C",6
"lib2","SARS-CoV-2","ACCCTTCTCAGAAATA",3,49.73,9.42,-1.42,0.18,1.61,1.03,0.01,">1 nonsynonymous","N4V P7T W106M T201V",4
"lib2","SARS-CoV-2","ACCCTTGAAAACTAAA",15,307.02,10.46,-0.38,0.03,2.95,1.04,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","ACCCTTGAAAGTGAAT",3,88.59,6.24,-4.59,0.7,1.5,1.22,0.02,">1 nonsynonymous","D68E K87Y S139R K199S",4
"lib2","SARS-CoV-2","ACCCTTGAACCCAATT",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A V37S L95D V115R P133S F185T",6
"lib2","SARS-CoV-2","ACCCTTGGGAAAGATA",13,437.09,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S43Y D97N N107E Y143P Q163G",5
"lib2","SARS-CoV-2","ACCCTTGGTCTCAAAA",5,158.99,10.9,0.06,0.05,2.88,1.14,0,">1 nonsynonymous","V37W T63K",2
"lib2","SARS-CoV-2","ACCCTTGTAGACTGCC",9,117,9.97,-0.86,0.07,2.71,1.04,0,">1 nonsynonymous","E10A N107S",2
"lib2","SARS-CoV-2","ACCCTTTAACGTAGAG",31,377.16,10.63,-0.2,0.03,2.91,1.06,0,">1 nonsynonymous","L60F A105S",2
"lib2","SARS-CoV-2","ACCCTTTAATGGCTGA",2,16.79,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","S139F P169V Q176I",3
"lib2","SARS-CoV-2","ACCCTTTATGAGGAGT",3,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K W106G L111Q",3
"lib2","SARS-CoV-2","ACCCTTTATGTACACT",2,64.01,9.94,-0.9,0.05,2.86,1.09,0,">1 nonsynonymous","N64V Y143L",2
"lib2","SARS-CoV-2","ACCCTTTCAGCCCTAT",5,30.76,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y39G F70S V77E N107S",4
"lib2","SARS-CoV-2","ACCCTTTCTCGGTTAA",8,2.23,NA,NA,NA,NA,NA,NA,"stop","L5* T15Y N92E E154S",4
"lib2","SARS-CoV-2","ACCCTTTTCCTCTGAA",6,114.63,10.76,-0.08,0.03,2.93,1.09,0,"1 nonsynonymous","T148N",1
"lib2","SARS-CoV-2","ACCGAAAAAAGACCCA",4,61.83,9.74,-1.1,0.09,2.05,1,0,">1 nonsynonymous","V11G P197W",2
"lib2","SARS-CoV-2","ACCGAAAAACAAGAGA",3,17.68,6.28,-4.56,0.57,1.5,1.14,0.02,">1 nonsynonymous","A33R T85A P96S N118S",4
"lib2","SARS-CoV-2","ACCGAAAACGCAGGCA",6,87.28,8.2,-2.64,0.22,1.5,1.13,0.02,">1 nonsynonymous","F12P Y35P",2
"lib2","SARS-CoV-2","ACCGAAAATACATTCT",9,27.71,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","F47I S139G C150G",3
"lib2","SARS-CoV-2","ACCGAAAATTAACGTA",2,12.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G86T C150R",2
"lib2","SARS-CoV-2","ACCGAAAATTCACTTG",11,237.32,10.53,-0.31,0.03,2.93,1.05,0,"1 nonsynonymous","D59V",1
"lib2","SARS-CoV-2","ACCGAAACAATAAAAG",5,34.8,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G83R L95R",2
"lib2","SARS-CoV-2","ACCGAAACAATTAGAG",3,42.62,10.02,-0.82,0.07,2.31,1.05,0,">1 nonsynonymous","A18R G152L",2
"lib2","SARS-CoV-2","ACCGAAACAGGACCAG",8,2.73,NA,NA,NA,NA,NA,NA,"stop","T15C G83V K87* G117L Y178M",5
"lib2","SARS-CoV-2","ACCGAAACATAAAAGG",4,9.56,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","A14L R73F",2
"lib2","SARS-CoV-2","ACCGAAACATACCCAG",4,18.42,10.94,0.11,0.05,2.94,1.05,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","ACCGAAACGATAATCG",1,39.09,10.23,-0.61,0.05,2.88,1.05,0,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","ACCGAAATAGATACAA",14,70.23,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G74H C102W Y121S S147T N151K F156V F160S V173D",8
"lib2","SARS-CoV-2","ACCGAAATATTCTCTA",2,10.46,10.26,-0.58,0.27,1.96,1.05,0.03,">1 nonsynonymous","L60R D97Q",2
"lib2","SARS-CoV-2","ACCGAAATGAAAAACA",6,104.14,7.66,-3.17,0.23,1.76,1.18,0.02,">1 nonsynonymous","S41C F62N N109H G166C S200P",5
"lib2","SARS-CoV-2","ACCGAACAGTAGAATG",4,9.5,7.83,-3,0.44,1.86,1.07,0.06,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","ACCGAACATACAACTA",10,2.43,NA,NA,NA,NA,NA,NA,"stop","A14* S19V K26T G83R",4
"lib2","SARS-CoV-2","ACCGAACATCTGGCAG",15,75.7,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5M F44R A89L",3
"lib2","SARS-CoV-2","ACCGAACCCACTGTAG",7,71.71,10.2,-0.64,0.07,2.61,1.04,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","ACCGAACTATCACAGT",9,124.17,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G101Q G146L",2
"lib2","SARS-CoV-2","ACCGAACTCCTATAAA",2,40.37,10.94,0.1,0.06,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGAATAAGCACAGA",3,79.29,10.76,-0.08,0.05,2.89,1.14,0,"1 nonsynonymous","S147V",1
"lib2","SARS-CoV-2","ACCGAATACAAAGCTG",3,74.24,9.83,-1,0.08,2.13,1.08,0,">1 nonsynonymous","L38N T100I",2
"lib2","SARS-CoV-2","ACCGAATATCTTATGC",4,278.71,10.3,-0.54,0.02,2.91,1.04,0,">1 nonsynonymous","D59E Y178I",2
"lib2","SARS-CoV-2","ACCGAATCAAATTAGT",5,36.28,10.88,0.05,0.07,2.92,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGAATCACCCCACT",4,48.6,9.39,-1.45,0.13,1.64,1.12,0.01,"1 nonsynonymous","N13P",1
"lib2","SARS-CoV-2","ACCGAATCCTCGTACT",7,159.78,7.92,-2.92,0.12,2.3,1.09,0,">1 nonsynonymous","N64Y C158Q",2
"lib2","SARS-CoV-2","ACCGAATCGACACCCA",9,29.86,9.67,-1.17,0.11,2,1.09,0.01,">1 nonsynonymous","A33D T85L",2
"lib2","SARS-CoV-2","ACCGAATGAAAAAATG",1,32.46,9.56,-1.27,0.1,2.16,1.04,0,">1 nonsynonymous","L5P D137N",2
"lib2","SARS-CoV-2","ACCGAATTTCATGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S I28K K128R",3
"lib2","SARS-CoV-2","ACCGACAACGAATGAT",1,23.53,10.9,0.06,0.09,2.88,1.11,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","ACCGACAATATGTATT",1,7.83,6.19,-4.64,0.47,2.46,1.13,0.01,">1 nonsynonymous","A22I F44N T85N F156M",4
"lib2","SARS-CoV-2","ACCGACAATGTCCCCA",2,52.73,9.4,-1.43,0.1,1.96,1.07,0,">1 nonsynonymous","A67S F126L S139T",3
"lib2","SARS-CoV-2","ACCGACACAGAAAAAC",2,12.86,10.34,-0.5,0.09,2.76,1.01,0,">1 nonsynonymous","E135S T148G",2
"lib2","SARS-CoV-2","ACCGACACCTGCTTCT",7,118.95,10.85,0.01,0.05,2.92,1.08,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","ACCGACACTGCACTGC",13,200.72,6,-4.84,0.8,1.5,1.1,0,">1 nonsynonymous","N110S C158I",2
"lib2","SARS-CoV-2","ACCGACAGTAATCCTA",11,101.45,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N92V P169T",2
"lib2","SARS-CoV-2","ACCGACATACACCAAG",8,52.51,7.95,-2.89,0.37,1.5,1,0.05,">1 nonsynonymous","T15E Q84R N107Q R127A",4
"lib2","SARS-CoV-2","ACCGACATGTGAGAAT",1,35.83,9.62,-1.21,0.13,2.15,1.12,0.01,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","ACCGACCAAGAAGTAA",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R Q163L",2
"lib2","SARS-CoV-2","ACCGACCAGGTTTCCG",4,30.86,10.51,-0.33,0.05,2.95,1.06,0,">1 nonsynonymous","I2S A105S E141G",3
"lib2","SARS-CoV-2","ACCGACCATGGACTTT",3,64.81,10.78,-0.06,0.05,2.9,1.12,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","ACCGACCATTTTATGT",14,494.12,10.15,-0.68,0.03,2.67,1.04,0,">1 nonsynonymous","T148A V173S",2
"lib2","SARS-CoV-2","ACCGACCCAAGACTGT",3,19.96,10.75,-0.09,0.05,3,1.02,0,">1 nonsynonymous","R16K S184Y",2
"lib2","SARS-CoV-2","ACCGACCCCAGACCTA",7,4.69,NA,NA,NA,NA,NA,NA,"stop","A14W R27A S45M N151*",4
"lib2","SARS-CoV-2","ACCGACGAGAAGCCGT",4,63.59,10.48,-0.36,0.05,2.94,1.03,0,">1 nonsynonymous","G9M L60S",2
"lib2","SARS-CoV-2","ACCGACGATGTATACA",2,47.67,10.27,-0.56,0.06,2.85,1,0,"1 nonsynonymous","K94Q",1
"lib2","SARS-CoV-2","ACCGACGCACGAAATC",7,0.67,NA,NA,NA,NA,NA,NA,"stop","G51T E154G T201*",3
"lib2","SARS-CoV-2","ACCGACGCATATAAAA",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P R136V V173C",3
"lib2","SARS-CoV-2","ACCGACGCCAAACCCC",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F L38S K56I Q79H Y93F E141N",6
"lib2","SARS-CoV-2","ACCGACGCGTAACTCT",6,40.75,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41P N64T D75R T148M C158L T170D",6
"lib2","SARS-CoV-2","ACCGACGTTCATGTAA",10,152.65,10.77,-0.07,0.02,2.96,1.05,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","ACCGACTCATACTGCA",2,0.89,NA,NA,NA,NA,NA,NA,"stop","A33H L60*",2
"lib2","SARS-CoV-2","ACCGACTCCCTCACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","R16S A42* I142S",3
"lib2","SARS-CoV-2","ACCGACTTTATTAAAG",2,61.26,10.26,-0.58,0.05,2.82,1.06,0,">1 nonsynonymous","T3G T15A C61K S129A N151K",5
"lib2","SARS-CoV-2","ACCGAGAACAAATAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib2","SARS-CoV-2","ACCGAGAATATTCTAG",10,10.34,NA,NA,NA,NA,NA,NA,"stop","C61* T100S G146F",3
"lib2","SARS-CoV-2","ACCGAGAATTTAATAT",6,63.18,8.1,-2.74,0.14,1.79,1.07,0.01,">1 nonsynonymous","C6D V37S N118L",3
"lib2","SARS-CoV-2","ACCGAGACACAACAAG",3,11.12,6,-4.84,2,3,1.19,0.02,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","ACCGAGAGAGGAGTCT",8,93.13,10.67,-0.17,0.05,3,1.01,0,"1 nonsynonymous","E135T",1
"lib2","SARS-CoV-2","ACCGAGAGGAGGGATT",5,23.03,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A18T Y50P L60A I72S",4
"lib2","SARS-CoV-2","ACCGAGAGTCTCAGGT",4,50.09,10.84,0.01,0.06,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGAGATATAACTAA",3,28.59,8.46,-2.38,0.25,1.68,1.12,0.03,">1 nonsynonymous","F12T C61R T100R A105T",4
"lib2","SARS-CoV-2","ACCGAGCACATTTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V G9S A42G A105L L122P",5
"lib2","SARS-CoV-2","ACCGAGCATAGATATT",1,25.95,8.78,-2.05,0.21,1.5,1.06,0.02,">1 nonsynonymous","N4K A18W Y39L C102I G166S",5
"lib2","SARS-CoV-2","ACCGAGCATGGGCCTG",16,4.08,NA,NA,NA,NA,NA,NA,"stop","P54* V181P",2
"lib2","SARS-CoV-2","ACCGAGCCGTCCGTTA",3,82.64,9.99,-0.84,0.12,2.45,1.05,0.01,">1 nonsynonymous","T85F Y178V",2
"lib2","SARS-CoV-2","ACCGAGGCACTACCGT",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30T T85R D98S G117S F167T",5
"lib2","SARS-CoV-2","ACCGAGTAAATCACCG",2,11.18,7.63,-3.2,0.47,1.5,1.01,0.05,">1 nonsynonymous","W23L T85N D90S V181W",4
"lib2","SARS-CoV-2","ACCGAGTAAGATAACC",4,53.21,10.89,0.06,0.04,2.96,1.05,0,"1 nonsynonymous","L122N",1
"lib2","SARS-CoV-2","ACCGAGTACACGTAAA",3,55.79,10.19,-0.64,0.08,2.6,1.03,0,">1 nonsynonymous","T3Y G83E N120G T140E",4
"lib2","SARS-CoV-2","ACCGAGTCCTAAACAG",5,22.55,6.13,-4.7,1.63,1.5,1.23,0.07,">1 nonsynonymous","D34W V77R D112F",3
"lib2","SARS-CoV-2","ACCGAGTGACCCAGAA",4,134.45,10.87,0.03,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGAGTGATACCGTG",9,220.45,8.52,-2.32,0.11,2.99,1.06,0.01,">1 nonsynonymous","L5P V37L Y175M",3
"lib2","SARS-CoV-2","ACCGATAAATCAATAA",2,106.86,8.72,-2.12,0.08,2.8,1.15,0,">1 nonsynonymous","A42T S129K A145K G174S",4
"lib2","SARS-CoV-2","ACCGATAACATATTCA",2,8.51,8.64,-2.19,0.21,2.03,1.16,0.02,">1 nonsynonymous","Q84F D98L I142P V153S S200A",5
"lib2","SARS-CoV-2","ACCGATAACGCTAAAC",1,11.38,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N92C C150T",2
"lib2","SARS-CoV-2","ACCGATAACGGAGATA",1,4.78,NA,NA,NA,NA,NA,NA,"stop","T46D N110* N157R",3
"lib2","SARS-CoV-2","ACCGATAAGTAGACGG",3,37,10.16,-0.67,0.11,2.62,1.05,0.01,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","ACCGATACATATGAAT",3,0.93,NA,NA,NA,NA,NA,NA,"stop","A18D W23C Q176V T201*",4
"lib2","SARS-CoV-2","ACCGATACATTGAACA",3,10.01,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9I P82M Y119L S129T",4
"lib2","SARS-CoV-2","ACCGATACCGTCATCC",4,25.81,6.19,-4.64,0.31,1.5,1.03,0,">1 nonsynonymous","N107R L131A",2
"lib2","SARS-CoV-2","ACCGATACTCAGATGT",4,32.52,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","C61S L95T D98S C102Y P169R",5
"lib2","SARS-CoV-2","ACCGATAGTTATGTCG",7,70.28,10.85,0.02,0.06,2.87,1.11,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","ACCGATATAGACGATA",2,69.82,8.35,-2.49,0.14,2.12,1.07,0.01,">1 nonsynonymous","T3V Y35E S41R G166K",4
"lib2","SARS-CoV-2","ACCGATATGATAATAA",2,35.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F G146V G155L",3
"lib2","SARS-CoV-2","ACCGATCAACGGTCAG",5,38.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F70L R179T",2
"lib2","SARS-CoV-2","ACCGATCCAGCGAAAG",4,102.48,10.14,-0.7,0.02,2.85,1.03,0,">1 nonsynonymous","Y35Q N120H",2
"lib2","SARS-CoV-2","ACCGATCCAGCTTAAA",4,35.52,10.62,-0.22,0.09,2.79,1.17,0,">1 nonsynonymous","N120D I138P",2
"lib2","SARS-CoV-2","ACCGATCCCAAAACGT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","F44N D59E Q168*",3
"lib2","SARS-CoV-2","ACCGATCCTCATATAT",2,6.16,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C49N T85P P149Y",3
"lib2","SARS-CoV-2","ACCGATCTAATCGCCA",2,2.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","ACCGATCTCTTTTAAT",8,76.31,8.25,-2.58,0.12,2.08,1.12,0.01,">1 nonsynonymous","Y123S G146F",2
"lib2","SARS-CoV-2","ACCGATCTTTTATTTA",10,87.91,10.75,-0.08,0.02,2.96,1.05,0,">1 nonsynonymous","L57M S164A",2
"lib2","SARS-CoV-2","ACCGATGAAATTCAAG",5,28.72,8.57,-2.27,0.28,1.5,1,0.04,">1 nonsynonymous","G9R G86S R136K",3
"lib2","SARS-CoV-2","ACCGATGGAACAACTA",3,20.65,10.6,-0.23,0.07,2.97,1.04,0,"1 nonsynonymous","K87L",1
"lib2","SARS-CoV-2","ACCGATGTATGGAGCG",6,6.91,6.53,-4.31,1.45,1.5,1.12,0.03,">1 nonsynonymous","T15Q P133D G152C",3
"lib2","SARS-CoV-2","ACCGATGTTTATGAGG",1,23.67,10.75,-0.08,0.12,2.91,1.12,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACCGATTAAATTTTAC",2,17.64,10.79,-0.05,0.04,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGATTATCATAAAA",16,83.81,6.21,-4.62,1.2,1.5,1.24,0.05,">1 nonsynonymous","L95R A105P S113G Y119G T201I",5
"lib2","SARS-CoV-2","ACCGATTGATTTAGAT",7,79.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2R N58Y D90I L122Q N157L L162D G174Q T201N",8
"lib2","SARS-CoV-2","ACCGATTGCATGAACC",6,98.66,10.46,-0.38,0.13,2.7,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACCGATTTTGAAATGA",3,31.54,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40R N157L Q168C",3
"lib2","SARS-CoV-2","ACCGCAAAAAAGAACT",4,64.21,10.48,-0.36,0.06,2.87,1.03,0,">1 nonsynonymous","N4V K132F",2
"lib2","SARS-CoV-2","ACCGCAAAATAATCAT",7,6.37,10.86,0.02,0.4,2.14,1.04,0.05,">1 nonsynonymous","N40D R127V",2
"lib2","SARS-CoV-2","ACCGCAAACGATCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D34L F62N Q176*",3
"lib2","SARS-CoV-2","ACCGCAAAGTAGAAAA",6,81.15,9.62,-1.21,0.07,2.58,1.09,0,">1 nonsynonymous","Y35M T100D V153P",3
"lib2","SARS-CoV-2","ACCGCAAATACCACCA",6,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80L D90G V173P",3
"lib2","SARS-CoV-2","ACCGCAACAGGCTAGG",3,9.94,9.16,-1.68,0.3,1.6,1.1,0.03,">1 nonsynonymous","F8Y F99I",2
"lib2","SARS-CoV-2","ACCGCAACTAACTAAT",10,80.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16L G86M P96Y N118T G174L",5
"lib2","SARS-CoV-2","ACCGCAAGAATTCCAA",9,118.36,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10Q S43C L95T N118T",4
"lib2","SARS-CoV-2","ACCGCACAAAACGTGA",7,23.27,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D97G V103Q T140W",3
"lib2","SARS-CoV-2","ACCGCACATAAGGAAA",3,16.77,6,-4.84,0.7,3,1.06,0,">1 nonsynonymous","D97M A105P",2
"lib2","SARS-CoV-2","ACCGCACATTACGGCC",2,70.2,10.16,-0.68,0.07,2.76,1,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","ACCGCACCCATCTGGT",3,39.44,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A14H C31T I80K D97I L122R C158H R179M",7
"lib2","SARS-CoV-2","ACCGCACTAGTAATTG",3,9.95,6.6,-4.24,1.68,3,1.13,0.02,">1 nonsynonymous","S36C S43A V103G T201V",4
"lib2","SARS-CoV-2","ACCGCACTGAACAAAA",14,156.3,8.07,-2.77,0.13,1.54,1.11,0.01,">1 nonsynonymous","D90V G166W",2
"lib2","SARS-CoV-2","ACCGCAGACTAAGCCA",15,208.09,9.81,-1.03,0.07,2.24,1.03,0,"1 nonsynonymous","L38D",1
"lib2","SARS-CoV-2","ACCGCAGAGAATAGTA",8,45.9,9.76,-1.08,0.06,1.96,1.11,0,">1 nonsynonymous","E10D N24I D59P",3
"lib2","SARS-CoV-2","ACCGCAGAGATCCACT",2,7.01,9.19,-1.64,0.31,2.29,1.24,0.03,">1 nonsynonymous","L5G G74M",2
"lib2","SARS-CoV-2","ACCGCAGCTACGCAAC",2,1.63,NA,NA,NA,NA,NA,NA,"stop","Y39* C61G R124N I142K Y165V",5
"lib2","SARS-CoV-2","ACCGCAGTTTATGGAA",15,326.18,10.16,-0.67,0.06,2.55,1.02,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","ACCGCATAAAATGTGC",9,75.05,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39N G51H F62T D68R E76S R136M G146V C150L",8
"lib2","SARS-CoV-2","ACCGCATAATTCACAT",10,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104F E141I",2
"lib2","SARS-CoV-2","ACCGCATATAACTCAC",4,85.45,9.28,-1.56,0.05,2.96,1.09,0,">1 nonsynonymous","D90N Y119S",2
"lib2","SARS-CoV-2","ACCGCATCACATGTCG",4,91.16,10.53,-0.31,0.05,2.96,1,0,">1 nonsynonymous","T3G G116M",2
"lib2","SARS-CoV-2","ACCGCATCCAAAACCA",1,35.14,8.84,-2,0.06,2.95,1.09,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","ACCGCATGAATTCTAA",3,58.08,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L60G A105G C150I",3
"lib2","SARS-CoV-2","ACCGCATGTACACCCG",5,6.51,NA,NA,NA,NA,NA,NA,"stop","G86A L122Y T201*",3
"lib2","SARS-CoV-2","ACCGCCACAACCAAGG",2,9.73,10.76,-0.07,0.09,3,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGCCACCGAACCAC",2,18.5,10.22,-0.61,0.15,2.62,1,0.01,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","ACCGCCAGTCGGGTCA",1,1.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACCGCCATACGTTGAA",3,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M A89N I104Q G117Q Q176R",5
"lib2","SARS-CoV-2","ACCGCCATTAATTCTG",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V R16E W23K V37C F167S",5
"lib2","SARS-CoV-2","ACCGCCCAAGTACAAG",4,42.1,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39F C102N D112E L125R Q176P",5
"lib2","SARS-CoV-2","ACCGCCCATCAACACA",9,24.76,6.42,-4.42,0.41,1.98,1.25,0.01,">1 nonsynonymous","I88T T100N L183N",3
"lib2","SARS-CoV-2","ACCGCCCCAACTTACT",1,27.13,10.58,-0.25,0.08,2.97,1.05,0,">1 nonsynonymous","I2N A42T T55K E141R",4
"lib2","SARS-CoV-2","ACCGCCCTCGCTAATA",9,157.44,10.87,0.03,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGCCGAGGATCTCA",15,129.27,10.59,-0.24,0.03,2.88,1.09,0,"1 nonsynonymous","P54N",1
"lib2","SARS-CoV-2","ACCGCCTACAGATTGA",6,54.66,10.88,0.05,0.05,3,1.03,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","ACCGCCTACGTGTCAA",8,122.8,10.45,-0.39,0.04,2.96,1.04,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","ACCGCCTCTTACAGGA",3,55.8,10.88,0.04,0.07,2.99,1.03,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","ACCGCCTTGGAATAAA",2,23.96,6.69,-4.15,0.33,1.5,1.07,0.02,">1 nonsynonymous","A14W P54A P161E",3
"lib2","SARS-CoV-2","ACCGCGATACACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","ACCGCGCCTTTCACCA",11,15.52,NA,NA,NA,NA,NA,NA,"stop","N1* D34L A81F N107F Q163P",5
"lib2","SARS-CoV-2","ACCGCGCGGACTTAAA",1,84.67,9.82,-1.01,0.06,2.35,1.09,0,">1 nonsynonymous","F44S Y178V",2
"lib2","SARS-CoV-2","ACCGCGGCCAACAATT",4,9.15,10.1,-0.74,0.13,3,1,0.01,">1 nonsynonymous","C31M T201P",2
"lib2","SARS-CoV-2","ACCGCGGTTTGCACAT",6,44.29,10.62,-0.21,0.06,2.82,1.14,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","ACCGCTAAAAGAACCT",4,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16D D34M Y93Q P191A",4
"lib2","SARS-CoV-2","ACCGCTAACCAATTGA",16,146.74,10.74,-0.1,0.03,2.92,1.08,0,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","ACCGCTAATCGCCTTA",9,62.86,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T63L I80K Y91V N120K T201K",5
"lib2","SARS-CoV-2","ACCGCTACGCAGTCCA",4,58.81,10.61,-0.23,0.07,2.87,1.13,0,">1 nonsynonymous","G9Y I138S",2
"lib2","SARS-CoV-2","ACCGCTCAGGGTAATA",5,16.38,10.17,-0.66,0.16,2.48,1,0.01,">1 nonsynonymous","P133C E141H P197N",3
"lib2","SARS-CoV-2","ACCGCTCATAAGCGAT",2,22.85,6.09,-4.74,0.75,1.5,1.14,0.01,">1 nonsynonymous","Y35C G86C",2
"lib2","SARS-CoV-2","ACCGCTCCACCATCGA",6,18.93,6,-4.84,1.43,1.5,1.16,0.01,">1 nonsynonymous","D68G D90G G146F F160T",4
"lib2","SARS-CoV-2","ACCGCTCCTAATCGTT",9,1.33,NA,NA,NA,NA,NA,NA,"stop","G9P Y91*",2
"lib2","SARS-CoV-2","ACCGCTCCTGGCTTAT",1,36.16,8.56,-2.27,0.35,1.5,1,0.06,">1 nonsynonymous","L38V Y50E Y91D Y119L",4
"lib2","SARS-CoV-2","ACCGCTCTCTCAAGGA",2,21.81,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","K48L C61L N92A Y159E T201Y",5
"lib2","SARS-CoV-2","ACCGCTCTTATTAGTT",8,190.46,8.26,-2.57,0.1,2.13,1.11,0,">1 nonsynonymous","C6R L125C",2
"lib2","SARS-CoV-2","ACCGCTCTTTAGCAGC",5,57.25,9.92,-0.92,0.08,2.43,1.05,0,">1 nonsynonymous","Y35R L57G",2
"lib2","SARS-CoV-2","ACCGCTGACCGTACCG",8,69.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38Q G51R D98F K128F C158S",5
"lib2","SARS-CoV-2","ACCGCTGCTGATCGCC",8,120.59,10.79,-0.04,0.04,2.98,1.05,0,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","ACCGCTTTGGATGTAG",12,112.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35A D68R G146A Y175S",4
"lib2","SARS-CoV-2","ACCGGAAACTCTCATC",2,10.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W106K R136V",2
"lib2","SARS-CoV-2","ACCGGAAAGGGGTTCC",3,71.26,10.85,0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGAAATATAAACG",2,14.57,10.73,-0.1,0.09,3,1,0,">1 nonsynonymous","G9M V37S",2
"lib2","SARS-CoV-2","ACCGGAACCATCTTGA",1,12.29,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","I2F A14I D112I S164L K199Y",5
"lib2","SARS-CoV-2","ACCGGAAGCGGAAGCC",13,132.37,10.82,-0.02,0.06,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGAAGCTTTTTGG",9,185.68,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C6F N13T Y159N",3
"lib2","SARS-CoV-2","ACCGGAAGGTTAGTCT",17,384.69,10.59,-0.25,0.03,2.91,1.09,0,">1 nonsynonymous","S41L F160N",2
"lib2","SARS-CoV-2","ACCGGAATGTTTTATA",7,113.6,9.62,-1.21,0.03,2.92,1.08,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","ACCGGACCTATCCTAT",4,76.6,10.39,-0.44,0.04,2.96,1.03,0,">1 nonsynonymous","N40S G116K T140H",3
"lib2","SARS-CoV-2","ACCGGACGGACCCCGC",2,55.29,10.61,-0.23,0.07,2.83,1.16,0,">1 nonsynonymous","S41C V153D",2
"lib2","SARS-CoV-2","ACCGGACTAAGTGAAT",11,184.53,10.84,0,0.03,2.9,1.1,0,">1 nonsynonymous","N58L L122K",2
"lib2","SARS-CoV-2","ACCGGAGAAACAGAAC",25,171.67,7.78,-3.06,0.22,1.5,1.12,0.02,">1 nonsynonymous","F44L Y50V",2
"lib2","SARS-CoV-2","ACCGGAGAACAATATG",4,124.19,10.81,-0.03,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGAGAACTTTCCG",16,230.75,10.6,-0.24,0.02,2.94,1.05,0,">1 nonsynonymous","D98L L187Q",2
"lib2","SARS-CoV-2","ACCGGAGACTTTCAAT",4,14.08,10.82,-0.02,0.09,2.79,1.23,0.01,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ACCGGAGATGCATATT",3,21.37,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D68R A89L N118L V181W",4
"lib2","SARS-CoV-2","ACCGGAGCTGCATCTC",2,49.62,8.58,-2.26,0.19,1.96,1.07,0.02,">1 nonsynonymous","I2D A89C G155D Y178N",4
"lib2","SARS-CoV-2","ACCGGAGGTTATTCCT",9,135.39,10.82,-0.02,0.03,2.97,1.03,0,"1 nonsynonymous","T55W",1
"lib2","SARS-CoV-2","ACCGGAGTGTCTAAAA",9,48.16,9.23,-1.6,0.23,1.5,1.1,0.02,">1 nonsynonymous","V11G K94A",2
"lib2","SARS-CoV-2","ACCGGATAACATTCCA",10,166.13,10.52,-0.32,0.05,2.99,1.02,0,">1 nonsynonymous","S36M C61L T201P",3
"lib2","SARS-CoV-2","ACCGGATACAAAGTAA",2,26,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","F12S L95S K114F G172S T201V",5
"lib2","SARS-CoV-2","ACCGGATAGAGCATTG",7,51.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P54Q G101H",2
"lib2","SARS-CoV-2","ACCGGATCCGATCGAG",3,70.86,10.29,-0.55,0.05,2.96,1.04,0,">1 nonsynonymous","V52F A67I L122V Q168S",4
"lib2","SARS-CoV-2","ACCGGATCCGGTTGAA",8,102.71,10.64,-0.19,0.04,2.95,1.03,0,">1 nonsynonymous","F62S T85A",2
"lib2","SARS-CoV-2","ACCGGCAGCCGCTTTT",7,51.12,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I2A N64R A105V I142N S184F",5
"lib2","SARS-CoV-2","ACCGGCATCTGTTGTG",4,25.38,8.26,-2.58,0.19,1.5,1.07,0.01,">1 nonsynonymous","L5G P96N N107Q",3
"lib2","SARS-CoV-2","ACCGGCGAGTTCGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* I138S",2
"lib2","SARS-CoV-2","ACCGGCGCCAGCCTAA",15,47.71,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A14L F62L G86V Y93T D112V I142L C150G",7
"lib2","SARS-CoV-2","ACCGGCTAAATTCTTA",5,88.46,10.88,0.04,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGGAAAAAACAAA",11,244.76,8.54,-2.3,0.09,2.89,1.08,0,"1 nonsynonymous","G166E",1
"lib2","SARS-CoV-2","ACCGGGAAAAGGGAGT",3,13.36,10.87,0.04,0.1,2.95,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGGAAAGGGTGCA",5,41.53,8.58,-2.26,0.26,1.5,1.06,0.03,">1 nonsynonymous","S53Y D59R F99V S184T",4
"lib2","SARS-CoV-2","ACCGGGCGCTTGGGAA",1,43.86,10.52,-0.31,0.04,2.92,1.02,0,">1 nonsynonymous","A22M K87V",2
"lib2","SARS-CoV-2","ACCGGGGTATTTGATA",3,69.52,9.92,-0.91,0.05,2.92,1.07,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","ACCGGGTGCTTAGATC",17,50.72,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","F12E D34I F62I D68Q A81D G86D T100N I104Q C150M",9
"lib2","SARS-CoV-2","ACCGGGTTCTATCTAA",8,48.16,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S113V R124S",2
"lib2","SARS-CoV-2","ACCGGGTTCTGACACG",6,59.76,9.52,-1.32,0.07,2.13,1.01,0,">1 nonsynonymous","C6L C61W Q144E P149S",4
"lib2","SARS-CoV-2","ACCGGTAAGAGCCGAT",4,93.7,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T15A T85P A145N",3
"lib2","SARS-CoV-2","ACCGGTAAGGGCCTAA",2,49.51,9.77,-1.07,0.05,2.92,1.03,0,">1 nonsynonymous","C61E T100L E141F T148P G152N",5
"lib2","SARS-CoV-2","ACCGGTAATCCCTTTA",1,4.02,NA,NA,NA,NA,NA,NA,"stop","C61S W106*",2
"lib2","SARS-CoV-2","ACCGGTCACAGAACTA",1,16.99,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F17M W23M V37L L57I I72L",5
"lib2","SARS-CoV-2","ACCGGTCTACTAATAG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","ACCGGTCTCATGCCAA",1,34.63,9.94,-0.9,0.12,2.74,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACCGGTGAGAACTGCC",4,34.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D112Q I138C",2
"lib2","SARS-CoV-2","ACCGGTGAGGTCCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56P Y91V P169Y V182W",4
"lib2","SARS-CoV-2","ACCGGTGTGGTAACTT",6,0.29,NA,NA,NA,NA,NA,NA,"stop","Y143W N151* S184I",3
"lib2","SARS-CoV-2","ACCGGTGTGTCGGCAG",3,22.45,9.04,-1.79,0.13,1.91,1.11,0,">1 nonsynonymous","L5R D59S G86S",3
"lib2","SARS-CoV-2","ACCGGTTAAAAAATTG",5,1.39,NA,NA,NA,NA,NA,NA,"stop","C31* N40D C49L P82D Y91T P149T",6
"lib2","SARS-CoV-2","ACCGTAAAAACCCGGA",3,21.45,7.65,-3.19,0.36,1.5,1.09,0.04,">1 nonsynonymous","K26I N118F G152F",3
"lib2","SARS-CoV-2","ACCGTAAAGTTGATTA",5,13.36,9.15,-1.68,0.24,1.5,1.08,0.03,">1 nonsynonymous","A33L K94E L122R",3
"lib2","SARS-CoV-2","ACCGTAAATAAATCTA",12,85.98,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V32K Y93H Y121K A145V F185P",5
"lib2","SARS-CoV-2","ACCGTAAATCATGAAA",3,0.47,NA,NA,NA,NA,NA,NA,"stop","G9V I28L N64I R73Q A89* P191T",6
"lib2","SARS-CoV-2","ACCGTAACCCCGGAGT",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K N13M L60Q K114Q Y178N",5
"lib2","SARS-CoV-2","ACCGTAAGAAAAAATA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","C61L P96L Q176*",3
"lib2","SARS-CoV-2","ACCGTAAGGACAAAAT",14,3.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","ACCGTAAGTAGGTTAA",2,3.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181N",1
"lib2","SARS-CoV-2","ACCGTAAGTCTTAACT",2,52.3,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R16D R25M V77M Y165L",4
"lib2","SARS-CoV-2","ACCGTAATATGGAACG",4,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D V103Y T140M C195S",4
"lib2","SARS-CoV-2","ACCGTAATCCCGTAAA",3,1.82,NA,NA,NA,NA,NA,NA,"stop","D112* G174W",2
"lib2","SARS-CoV-2","ACCGTAATTCACCCGG",3,52.55,10.74,-0.1,0.03,2.95,1.08,0,"1 nonsynonymous","T55M",1
"lib2","SARS-CoV-2","ACCGTAATTGAAATCG",7,21.02,10.75,-0.08,0.06,2.97,1.04,0,"1 nonsynonymous","K48V",1
"lib2","SARS-CoV-2","ACCGTACATAAGAAAG",7,75.6,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N1I I80R W106T",3
"lib2","SARS-CoV-2","ACCGTACCACCTATAA",4,57.22,10.86,0.02,0.04,2.93,1.08,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","ACCGTACGAAGAGGCG",1,14.93,10.8,-0.04,0.07,3,1.03,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","ACCGTACTCAACCACA",4,75.36,10.79,-0.05,0.06,2.89,1.11,0,">1 nonsynonymous","S41Y S45T",2
"lib2","SARS-CoV-2","ACCGTACTCATCCAAC",4,32.41,10.44,-0.4,0.09,2.84,1.04,0,">1 nonsynonymous","R16G T55M P169S",3
"lib2","SARS-CoV-2","ACCGTACTGAGAGAAC",1,21.21,9.97,-0.86,0.13,2.36,1.14,0.01,">1 nonsynonymous","I72M K198N",2
"lib2","SARS-CoV-2","ACCGTAGAATTTTGTC",3,13.19,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G9I P82W I88A D98L R136L",5
"lib2","SARS-CoV-2","ACCGTAGGAGTTCTTA",7,42.98,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2P R73A G101A V173T",4
"lib2","SARS-CoV-2","ACCGTAGGATGGTATA",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R F8L I104D P161C P169N",5
"lib2","SARS-CoV-2","ACCGTAGGCCTTATTT",6,101.02,8.56,-2.28,0.1,2.96,1.03,0,">1 nonsynonymous","C6G T170G L187V",3
"lib2","SARS-CoV-2","ACCGTAGGGCGTGCGC",3,21.8,10.28,-0.56,0.09,2.83,1.08,0,">1 nonsynonymous","Y39S V180I",2
"lib2","SARS-CoV-2","ACCGTAGTAAGTCATA",1,37.58,10.81,-0.03,0.06,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGTATAAAAGATTG",6,99.09,8.6,-2.24,0.05,2.11,1.05,0,">1 nonsynonymous","A42P V153F Q176R",3
"lib2","SARS-CoV-2","ACCGTATAAACCGAAA",3,8.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I L60I V103N G116P R136F Q176A",6
"lib2","SARS-CoV-2","ACCGTATGGTAAATCC",2,77.6,8.65,-2.18,0.1,2.24,1.12,0,">1 nonsynonymous","E10R P54A L60K A145K T201R",5
"lib2","SARS-CoV-2","ACCGTCAATCTACACG",4,68.74,8.38,-2.46,0.15,1.95,1.08,0.01,">1 nonsynonymous","D98A G146V",2
"lib2","SARS-CoV-2","ACCGTCACAACTTAGA",2,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y F44N Y143T",3
"lib2","SARS-CoV-2","ACCGTCACAGAGAAAT",1,18.22,10.77,-0.07,0.1,2.89,1.13,0,">1 nonsynonymous","V115I T140C P149S",3
"lib2","SARS-CoV-2","ACCGTCACCATAATTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","N118T V153* P169R",3
"lib2","SARS-CoV-2","ACCGTCACTTCCAGAG",1,9.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACCGTCAGTATGTATG",2,40.04,10.7,-0.14,0.06,2.87,1.03,0,">1 nonsynonymous","A22R T55S",2
"lib2","SARS-CoV-2","ACCGTCATACCCGCAC",6,85.44,10.78,-0.05,0.03,2.97,1.05,0,"1 nonsynonymous","S29K",1
"lib2","SARS-CoV-2","ACCGTCATTAGTATAA",11,27.99,8.06,-2.78,0.4,1.5,1,0.07,">1 nonsynonymous","G51T N92S",2
"lib2","SARS-CoV-2","ACCGTCCAATCCTCAA",2,5.77,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","D59L K87V Y91K E141Y Y159C T201V",6
"lib2","SARS-CoV-2","ACCGTCCACACTACTG",2,10.51,10.15,-0.68,0.17,2.32,1.05,0.01,">1 nonsynonymous","T3M S45L",2
"lib2","SARS-CoV-2","ACCGTCCATCTTAAAC",11,38.91,6.55,-4.29,0.41,1.5,1.15,0.02,">1 nonsynonymous","P96R L162M",2
"lib2","SARS-CoV-2","ACCGTCGCACACACGT",1,11.79,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","Y35R G83A C102P F156R V173F",5
"lib2","SARS-CoV-2","ACCGTCGCACTACGTA",10,154.44,10.44,-0.39,0.04,2.89,1.08,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","ACCGTCTAATAATTTC",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N S43I L57S G86L W106S L131V T201S",7
"lib2","SARS-CoV-2","ACCGTCTATACTCAAC",19,50.26,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3K G9Q I88S F99M R136M S200L",6
"lib2","SARS-CoV-2","ACCGTCTATGAATGTA",4,57.89,7.52,-3.32,0.32,1.5,1.11,0.03,">1 nonsynonymous","A14R P96V",2
"lib2","SARS-CoV-2","ACCGTCTTATAAAGAT",2,24.71,10.09,-0.75,0.08,2.91,1.04,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","ACCGTCTTTCCCCTTA",3,53.98,9.48,-1.36,0.12,1.98,1.02,0.01,">1 nonsynonymous","T55M A81D F156R Q163C A192T",5
"lib2","SARS-CoV-2","ACCGTGAATTTAAATT",3,67.66,10.22,-0.62,0.03,2.96,1.08,0,">1 nonsynonymous","S53T G174T T201R",3
"lib2","SARS-CoV-2","ACCGTGACCGCAGGTC",6,65.67,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83W A105E H189V",3
"lib2","SARS-CoV-2","ACCGTGCAACAAACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* E141R G152F R179T",4
"lib2","SARS-CoV-2","ACCGTGCACTACCAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P S36V T63I K114S",4
"lib2","SARS-CoV-2","ACCGTGCGCAATCGCA",5,39.03,10.84,0.01,0.06,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGTGCTACGTAATT",1,30.11,6,-4.84,1.46,1.5,1.29,0.03,">1 nonsynonymous","K94V N107S",2
"lib2","SARS-CoV-2","ACCGTGGAAGACACCT",5,71.92,9.34,-1.5,0.09,1.74,1.05,0,">1 nonsynonymous","V37Y P96V",2
"lib2","SARS-CoV-2","ACCGTGGAATAGGACT",2,6.94,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N13I N58Q T85L N120G T170C S184R",6
"lib2","SARS-CoV-2","ACCGTGGCAACCCAGA",7,66.86,10.76,-0.07,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGTTAACCGGCACA",8,25.92,6.33,-4.51,0.4,1.5,1.12,0.01,">1 nonsynonymous","T15C A89L T148I S184Y",4
"lib2","SARS-CoV-2","ACCGTTAATATCCCCA",1,19.61,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","S29R S36K W106G L131Q N157L T201H",6
"lib2","SARS-CoV-2","ACCGTTACTCATCAAC",7,73.97,10.36,-0.47,0.06,2.87,1.03,0,">1 nonsynonymous","G83Y E141A P149L",3
"lib2","SARS-CoV-2","ACCGTTACTGTGCCCA",6,76.23,9.58,-1.25,0.08,1.85,1.02,0,">1 nonsynonymous","E10F N107S",2
"lib2","SARS-CoV-2","ACCGTTAGATGGAGTT",3,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V C158T V173Q",3
"lib2","SARS-CoV-2","ACCGTTATGTTATTTG",6,92.19,10.76,-0.08,0.03,2.94,1.06,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","ACCGTTATTTACTACA",10,81.99,9.26,-1.57,0.19,1.6,1.1,0.01,"1 nonsynonymous","Y165K",1
"lib2","SARS-CoV-2","ACCGTTCCTTGATATA",6,126,10.8,-0.03,0.04,2.96,1.05,0,"1 nonsynonymous","K132A",1
"lib2","SARS-CoV-2","ACCGTTCGATTCAGTG",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68S D98L N107V",3
"lib2","SARS-CoV-2","ACCGTTCTGTGTATCG",20,4.35,NA,NA,NA,NA,NA,NA,"stop","C6F K56*",2
"lib2","SARS-CoV-2","ACCGTTGCGGCAGACC",6,131.05,10.84,0,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCGTTGCGGCGTTGC",16,120.86,8.67,-2.17,0.09,2.02,1.08,0,">1 nonsynonymous","N58A Y165L",2
"lib2","SARS-CoV-2","ACCGTTGCGGGCTAGG",8,92.11,10.77,-0.06,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCGTTTCACAGTACC",1,1.33,NA,NA,NA,NA,NA,NA,"stop","N4T T100* G166L",3
"lib2","SARS-CoV-2","ACCGTTTTACAATACG",2,1056.95,10.21,-0.62,0.03,2.72,1.02,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","ACCGTTTTCGATAAGG",5,67.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S69E D97M G117W V173I",4
"lib2","SARS-CoV-2","ACCTAAAAAATTAGTT",12,57.63,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I2H L95R N107P K132A T140G",5
"lib2","SARS-CoV-2","ACCTAAAAATTAAACG",1,12.42,10.37,-0.47,0.21,2.59,1.4,0.02,">1 nonsynonymous","T100I L125F",2
"lib2","SARS-CoV-2","ACCTAAAAATTTGAGA",3,30.91,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I28V T85L C150N",3
"lib2","SARS-CoV-2","ACCTAAAACTGAAATT",3,42.74,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L38T V52G N120G P149C T201S",5
"lib2","SARS-CoV-2","ACCTAAAATCAACATT",2,0.12,NA,NA,NA,NA,NA,NA,"stop","D98* Y178E V182C",3
"lib2","SARS-CoV-2","ACCTAAAATCCACTTA",9,145.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14T I72T A89G Y175K",4
"lib2","SARS-CoV-2","ACCTAAAATGAAACAC",4,16.29,6.89,-3.94,0.55,1.5,1.13,0.01,">1 nonsynonymous","Y35S F99S G116W",3
"lib2","SARS-CoV-2","ACCTAAACATAGAAGT",6,62.59,10.32,-0.51,0.05,2.84,1.04,0,">1 nonsynonymous","L5W W106F",2
"lib2","SARS-CoV-2","ACCTAAACATTAACCA",6,16.31,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N64D K87R P96V D112E S129K",5
"lib2","SARS-CoV-2","ACCTAAACTATTCCTG",1,24.58,8.97,-1.86,0.1,2.75,1.09,0.01,">1 nonsynonymous","I2C S113T Y121F T201L",4
"lib2","SARS-CoV-2","ACCTAAACTGACCGAA",6,45.33,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36M P96R F167T",3
"lib2","SARS-CoV-2","ACCTAAAGAACTTTGC",10,218.83,10.22,-0.62,0.03,2.89,1.05,0,">1 nonsynonymous","C6W C61N E154T",3
"lib2","SARS-CoV-2","ACCTAAAGCAACAAAG",3,23.56,10.27,-0.57,0.07,2.88,1.05,0,">1 nonsynonymous","F12V N58S",2
"lib2","SARS-CoV-2","ACCTAAAGCAGTACCT",9,143.74,6,-4.84,1.35,1.5,1.17,0,">1 nonsynonymous","T63F D75V D98N P161V",4
"lib2","SARS-CoV-2","ACCTAAAGTATATGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N4V E10* H189Y",3
"lib2","SARS-CoV-2","ACCTAAATAAGCAATG",10,49.45,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y91D L95C P149S",3
"lib2","SARS-CoV-2","ACCTAAATACGATATA",4,44.98,9.03,-1.8,0.1,1.78,1.14,0,">1 nonsynonymous","T3S R27V D34A C61P G116R",5
"lib2","SARS-CoV-2","ACCTAAATAGAGTAAG",2,56.54,10.23,-0.61,0.11,2.52,1.03,0.01,">1 nonsynonymous","N30T D97F",2
"lib2","SARS-CoV-2","ACCTAAATAGCGGGCG",7,52,10.83,-0.01,0.08,2.79,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTAAATATATTGGA",6,172.75,10.24,-0.59,0.03,2.85,1.06,0,">1 nonsynonymous","F44D F134H",2
"lib2","SARS-CoV-2","ACCTAAATATTGAAGA",13,0.6,NA,NA,NA,NA,NA,NA,"stop","A22T Y35R A105F L122*",4
"lib2","SARS-CoV-2","ACCTAAATCCTAAATA",15,261.77,10.72,-0.11,0.04,2.9,1.09,0,">1 nonsynonymous","L60E T201Q",2
"lib2","SARS-CoV-2","ACCTAAATGGTAGTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","F62R D90L N110*",3
"lib2","SARS-CoV-2","ACCTAACAATAAATAA",4,47.69,10.71,-0.13,0.04,2.84,1.14,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","ACCTAACACCAGTAGC",5,95.63,10.49,-0.35,0.03,2.94,1.05,0,">1 nonsynonymous","T63A D98Y",2
"lib2","SARS-CoV-2","ACCTAACACCTCAGAT",11,69.23,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107Q A145V C158R",3
"lib2","SARS-CoV-2","ACCTAACACGTCAGAC",10,101.86,8.5,-2.34,0.12,2.42,1.08,0,">1 nonsynonymous","A42M G117S P149S T170N",4
"lib2","SARS-CoV-2","ACCTAACATAGGATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13S V37L N92* G116R",4
"lib2","SARS-CoV-2","ACCTAACATGAAACCA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14T A105V V173*",3
"lib2","SARS-CoV-2","ACCTAACATGGTCGTT",2,21.15,9.05,-1.78,0.06,2.97,1.02,0,">1 nonsynonymous","T170K G174L",2
"lib2","SARS-CoV-2","ACCTAACCCGGTCTGC",7,90.82,9.04,-1.8,0.07,2.76,1.09,0,">1 nonsynonymous","G51S K87D",2
"lib2","SARS-CoV-2","ACCTAACCGTCTGTGT",1,11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23E Y91E N120L",3
"lib2","SARS-CoV-2","ACCTAACCTTGTCTTC",9,193.25,6.37,-4.46,0.22,1.5,1.14,0,">1 nonsynonymous","Y39G R127F",2
"lib2","SARS-CoV-2","ACCTAACGACAATAAT",2,91.47,8.19,-2.64,0.11,1.75,1.06,0.01,">1 nonsynonymous","S29K K48T N107L P197R",4
"lib2","SARS-CoV-2","ACCTAACGCAATGCAG",1,71.17,10.8,-0.03,0.05,2.88,1.11,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","ACCTAACGCATTAATT",8,105.07,7.83,-3,0.16,1.56,1.15,0.01,">1 nonsynonymous","F12L Y119H F185T",3
"lib2","SARS-CoV-2","ACCTAACGTACGTCAT",17,5.23,NA,NA,NA,NA,NA,NA,"stop","L5S G86R L122S Y123* S147H",5
"lib2","SARS-CoV-2","ACCTAACTCCCTACAT",1,3.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142Q",1
"lib2","SARS-CoV-2","ACCTAACTGAGGTACT",4,32.79,10.09,-0.75,0.11,2.21,1.04,0.01,">1 nonsynonymous","R27F F167Y",2
"lib2","SARS-CoV-2","ACCTAACTGGCTATGT",11,43.11,9.83,-1,0.12,2.32,1.02,0.01,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","ACCTAAGAAGCAAAAG",1,16.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N G101F K128T H189L",4
"lib2","SARS-CoV-2","ACCTAAGACATCCTTA",4,0,NA,NA,NA,NA,NA,NA,"stop","P54*",1
"lib2","SARS-CoV-2","ACCTAAGAGACTAGAC",2,25.73,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N4C Y91L C102F V173A T201L",5
"lib2","SARS-CoV-2","ACCTAAGAGCCATAGC",9,79.85,10.8,-0.04,0.03,3,1.02,0,">1 nonsynonymous","K56T T140A T201M",3
"lib2","SARS-CoV-2","ACCTAAGAGTCCATCT",5,36.77,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2S C6L D59I V103G G166A",5
"lib2","SARS-CoV-2","ACCTAAGATAATGTTC",6,86.73,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N4M V37G K94I T201C",4
"lib2","SARS-CoV-2","ACCTAAGCCACTATCG",6,55.86,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V37R N92A D112E N120F",4
"lib2","SARS-CoV-2","ACCTAAGCTTTGCCGA",15,70.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60H V77G G86H T170F",4
"lib2","SARS-CoV-2","ACCTAAGGTAAAAGGG",5,15.49,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S36A D59V Y121N G155N",4
"lib2","SARS-CoV-2","ACCTAAGTAAACCATT",6,221.53,10.14,-0.69,0.04,2.84,1.04,0,">1 nonsynonymous","A33L I104L Y178W",3
"lib2","SARS-CoV-2","ACCTAAGTAGAGACTG",1,5.56,9.75,-1.08,0.33,2.1,1.11,0.02,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","ACCTAATAGAGCTGTA",11,150.6,8.58,-2.26,0.06,2.97,1.07,0,"1 nonsynonymous","Y143A",1
"lib2","SARS-CoV-2","ACCTAATAGCCATCCT",2,28.07,10.78,-0.06,0.07,2.96,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTAATAGTCCAGTT",6,4.24,NA,NA,NA,NA,NA,NA,"stop","C6P A14L R25C S41* L57S Y119H S147H C150W Y178C",9
"lib2","SARS-CoV-2","ACCTAATATGCTAAAA",1,3.8,NA,NA,NA,NA,NA,NA,"stop","T63H S129* R179P",3
"lib2","SARS-CoV-2","ACCTAATATGTTACTG",4,31.2,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F8K F47V G86S V180K",4
"lib2","SARS-CoV-2","ACCTAATCACCACTAC",9,262.4,9.59,-1.25,0.03,2.93,1.08,0,">1 nonsynonymous","N4V Y119K",2
"lib2","SARS-CoV-2","ACCTAATCTATTACCT",1,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C Y66N R124S",3
"lib2","SARS-CoV-2","ACCTAATGGATCATTT",1,13.51,8.17,-2.67,0.22,2.49,1.27,0.02,">1 nonsynonymous","C61R Y119P I142K",3
"lib2","SARS-CoV-2","ACCTAATTTTTGAATA",3,1.36,NA,NA,NA,NA,NA,NA,"stop","S113R L122T S129M E135F Y143* R179D",6
"lib2","SARS-CoV-2","ACCTACAAAAAAAATT",7,181.22,10.73,-0.1,0.03,2.96,1.05,0,">1 nonsynonymous","G196V K198V",2
"lib2","SARS-CoV-2","ACCTACAAAATCCACT",6,5.82,NA,NA,NA,NA,NA,NA,"stop","F44S L122* T140R V194I",4
"lib2","SARS-CoV-2","ACCTACAAACATCTAC",6,44.91,10.76,-0.08,0.07,2.88,1.14,0,">1 nonsynonymous","I2N F62T Q168R",3
"lib2","SARS-CoV-2","ACCTACAACGGAATAG",11,1.38,NA,NA,NA,NA,NA,NA,"stop","N107I N157*",2
"lib2","SARS-CoV-2","ACCTACAAGAGTAATC",8,0,NA,NA,NA,NA,NA,NA,"stop","C6* R73I V103D V173F",4
"lib2","SARS-CoV-2","ACCTACAAGTCATTAG",1,18.82,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D34K S43T L95R E141S",4
"lib2","SARS-CoV-2","ACCTACAAGTGAGCAG",5,24.7,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","Y93R F126H",2
"lib2","SARS-CoV-2","ACCTACACAAAATAAC",10,130.5,7.88,-2.96,0.15,2,1.05,0.01,">1 nonsynonymous","T3L Y143R",2
"lib2","SARS-CoV-2","ACCTACACACTCAACA",3,136.2,10.27,-0.57,0.05,2.83,1.07,0,">1 nonsynonymous","S43D T85W P133A",3
"lib2","SARS-CoV-2","ACCTACACACTCTCCG",3,82.48,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G172L L188I",2
"lib2","SARS-CoV-2","ACCTACACAGCGTGCA",3,47.23,10.28,-0.56,0.06,2.95,1.05,0,">1 nonsynonymous","V32I F62D",2
"lib2","SARS-CoV-2","ACCTACACCCATGCTT",7,78.13,10.75,-0.09,0.03,2.89,1.12,0,">1 nonsynonymous","K56E Q163R",2
"lib2","SARS-CoV-2","ACCTACACGAAATAAT",1,12.02,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Q84D S129R G172C",3
"lib2","SARS-CoV-2","ACCTACACTCCTCCCA",1,15.97,10.47,-0.37,0.07,2.93,1.07,0,">1 nonsynonymous","N1K F44V",2
"lib2","SARS-CoV-2","ACCTACAGAAAAAAAG",2,7.66,6,-4.84,2,1.5,1.08,0.06,">1 nonsynonymous","S45L P96W K132M P197S",4
"lib2","SARS-CoV-2","ACCTACAGGGAAGTTA",8,72.94,10.86,0.02,0.05,2.86,1.15,0,">1 nonsynonymous","K114W L122S",2
"lib2","SARS-CoV-2","ACCTACAGGTAATTGT",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152I G172V",2
"lib2","SARS-CoV-2","ACCTACAGTAAACAAA",5,81.76,6,-4.84,1.21,1.5,1.13,0.01,">1 nonsynonymous","Y21L V32N T100E",3
"lib2","SARS-CoV-2","ACCTACCAACTACAAG",16,53.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3C I28T C61G Y119V",4
"lib2","SARS-CoV-2","ACCTACCACAAACATA",4,42.37,9.01,-1.83,0.26,1.5,1,0.03,">1 nonsynonymous","N4S K26G R136I V173L",4
"lib2","SARS-CoV-2","ACCTACCAGACTCTAA",9,143.15,10.4,-0.43,0.04,2.88,1.07,0,">1 nonsynonymous","Y35M S41Y D98L K198F",4
"lib2","SARS-CoV-2","ACCTACCATGCGTAAA",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29Y V37L D90L V103D P149Q",5
"lib2","SARS-CoV-2","ACCTACCATTTGCACA",3,4.27,NA,NA,NA,NA,NA,NA,"stop","D68R G86W L162* V173L",4
"lib2","SARS-CoV-2","ACCTACCCTCCTTCCT",2,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118M P161F",2
"lib2","SARS-CoV-2","ACCTACCCTTTGGGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* Y119T Y165K",3
"lib2","SARS-CoV-2","ACCTACCGTGGGACTG",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W Y50H N130S T140Y P191Y",5
"lib2","SARS-CoV-2","ACCTACCTTGACCGCT",2,43.27,7.94,-2.9,0.27,1.68,1.2,0.02,">1 nonsynonymous","A18D S113Y",2
"lib2","SARS-CoV-2","ACCTACGAAAAGCGTA",1,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","ACCTACGAAGTTGACA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","Y39* N151K T201M",3
"lib2","SARS-CoV-2","ACCTACGCAATGCGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26P D90H Y119* S147* K198M",5
"lib2","SARS-CoV-2","ACCTACGTTAATAGGT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F12* S36A G86R F156H",4
"lib2","SARS-CoV-2","ACCTACTAGACAACCT",9,78.12,6.55,-4.28,0.31,1.5,1.09,0.01,">1 nonsynonymous","G9R K56L A89S N130A D137T",5
"lib2","SARS-CoV-2","ACCTACTCACTAAATT",4,51.84,9.35,-1.49,0.08,1.98,1.05,0,">1 nonsynonymous","L38S S139G",2
"lib2","SARS-CoV-2","ACCTACTCATCAGTTG",3,1.01,NA,NA,NA,NA,NA,NA,"stop","K94* L131W G155W",3
"lib2","SARS-CoV-2","ACCTACTCCCCCCAAT",6,60.12,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10S D112P Y121N",3
"lib2","SARS-CoV-2","ACCTACTTTTCCCTCA",20,166.31,8.63,-2.2,0.18,1.5,1.09,0.01,">1 nonsynonymous","F12V E76Y",2
"lib2","SARS-CoV-2","ACCTAGAAAACCAAGT",3,126.46,8.34,-2.49,0.09,2.65,1.06,0,">1 nonsynonymous","F126T L162V",2
"lib2","SARS-CoV-2","ACCTAGAAAGTCACAA",4,6.53,10.33,-0.51,0.28,1.63,1.08,0.05,">1 nonsynonymous","T15Y S45Y Y123K T140L",4
"lib2","SARS-CoV-2","ACCTAGAAGAAGAAAT",4,56.02,10.8,-0.03,0.06,2.97,1.07,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","ACCTAGAAGCTAATGC",3,25.16,10.41,-0.42,0.17,2.71,1.24,0.02,">1 nonsynonymous","D59Y S184R",2
"lib2","SARS-CoV-2","ACCTAGAAGTGCAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S41K F62*",2
"lib2","SARS-CoV-2","ACCTAGAAGTGCACAT",3,69.75,6,-4.84,0.7,1.5,1.09,0,">1 nonsynonymous","G86Y Y178D",2
"lib2","SARS-CoV-2","ACCTAGAATTGAACTT",4,18.72,6.24,-4.6,0.95,1.5,1.09,0.06,">1 nonsynonymous","T15M S53E G86F V103W",4
"lib2","SARS-CoV-2","ACCTAGACCACTAGAT",3,19.78,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N13C L57W N64W Y178L",4
"lib2","SARS-CoV-2","ACCTAGAGTGCACACA",7,0.14,NA,NA,NA,NA,NA,NA,"stop","C6Y A33V K132*",3
"lib2","SARS-CoV-2","ACCTAGATCCCTAACT",2,29.47,10.13,-0.7,0.13,2.35,1.05,0.01,">1 nonsynonymous","E10F D97S",2
"lib2","SARS-CoV-2","ACCTAGCTCTGGCATT",4,36.96,8.41,-2.42,0.24,1.69,1.16,0.02,">1 nonsynonymous","L5S R27Y Y121N E141Y",4
"lib2","SARS-CoV-2","ACCTAGGCCCCCCATT",14,97.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S147A C150W T170R",3
"lib2","SARS-CoV-2","ACCTAGTATAAACGGG",11,36.3,7.56,-3.28,0.22,1.55,1.07,0.02,">1 nonsynonymous","A33L K128L D137I",3
"lib2","SARS-CoV-2","ACCTAGTATTGACAAC",7,57.99,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","P82Q N171L",2
"lib2","SARS-CoV-2","ACCTAGTCTGTCCAAG",3,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A T15Y C102Y C158H",4
"lib2","SARS-CoV-2","ACCTAGTGATAAAAAT",6,14.81,6.25,-4.58,0.75,1.97,1.1,0.03,">1 nonsynonymous","K114Q R127P T201M",3
"lib2","SARS-CoV-2","ACCTATAAACCAGGGC",3,151.64,9.88,-0.95,0.03,2.87,1.06,0,">1 nonsynonymous","D98R Y119R",2
"lib2","SARS-CoV-2","ACCTATAAATAAATCT",9,84.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35H I72A R78D C102L",4
"lib2","SARS-CoV-2","ACCTATAAATGAAATT",8,171.62,10.59,-0.24,0.04,2.89,1.06,0,"1 nonsynonymous","G155T",1
"lib2","SARS-CoV-2","ACCTATAAATGACCTG",17,176.61,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I28S D59L I72F D98A N107T Y123Q",6
"lib2","SARS-CoV-2","ACCTATAACCATGAAC",8,65.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4T T55D D68L N92S",4
"lib2","SARS-CoV-2","ACCTATAAGCATAGGA",3,36.67,7.35,-3.48,0.19,1.5,1.09,0.01,">1 nonsynonymous","Y123G G146C",2
"lib2","SARS-CoV-2","ACCTATACAAATCAAT",3,34.19,10.93,0.1,0.08,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTATACCAAACTCG",4,25.19,10.79,-0.05,0.07,2.88,1.15,0,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","ACCTATACCTTACTAG",3,57.13,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R27T G83I R124F Y143F F156Q G166D",6
"lib2","SARS-CoV-2","ACCTATAGAAATTACA",9,48.03,9.94,-0.89,0.09,2.02,1.07,0,">1 nonsynonymous","A14G N110M E141Y",3
"lib2","SARS-CoV-2","ACCTATAGATGCACGA",10,138.61,10.25,-0.58,0.05,2.96,1.04,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","ACCTATATATCGGCAA",4,49.74,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","E10S Y93P",2
"lib2","SARS-CoV-2","ACCTATATATGCCAGG",10,136.53,10.37,-0.46,0.05,2.92,1.08,0,">1 nonsynonymous","G9N G174T",2
"lib2","SARS-CoV-2","ACCTATATATTCCAGA",15,101.27,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A22E C61V D68W F160S N171S",5
"lib2","SARS-CoV-2","ACCTATATCAGAGTAC",3,24.71,8.88,-1.96,0.13,2.75,1.12,0.01,">1 nonsynonymous","T15L G117A L125M",3
"lib2","SARS-CoV-2","ACCTATATCGACCATC",2,23.71,6,-4.84,2,3,1.25,0,">1 nonsynonymous","C6S A105R E141F",3
"lib2","SARS-CoV-2","ACCTATATCGCGGCAA",1,18.55,10.56,-0.27,0.05,3,1.02,0,"1 nonsynonymous","I142Y",1
"lib2","SARS-CoV-2","ACCTATATGCAACACG",10,173.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y143S C150E",2
"lib2","SARS-CoV-2","ACCTATCAAAAAATAA",2,15.97,9.89,-0.95,0.11,3,1.05,0,">1 nonsynonymous","N58D R73S",2
"lib2","SARS-CoV-2","ACCTATCAAAATCATC",2,15.85,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A18L I28G Y91R",3
"lib2","SARS-CoV-2","ACCTATCACAACATCT",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50E C61T K199R",3
"lib2","SARS-CoV-2","ACCTATCACTAAAACA",2,88,6,-4.84,2,3,1.37,0.01,">1 nonsynonymous","R16A T140F F167Q",3
"lib2","SARS-CoV-2","ACCTATCAGCTGATAC",4,27.74,10.58,-0.26,0.07,2.97,1,0,">1 nonsynonymous","T3L G152R",2
"lib2","SARS-CoV-2","ACCTATCATTACGCTA",3,5.39,6,-4.84,2,1.5,1.09,0.02,"1 nonsynonymous","V103D",1
"lib2","SARS-CoV-2","ACCTATCGACCTTCGA",1,70.79,10.43,-0.41,0.05,2.9,1.04,0,">1 nonsynonymous","T100V T170S",2
"lib2","SARS-CoV-2","ACCTATCGTAACTAAT",3,58.08,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R124E T201V",2
"lib2","SARS-CoV-2","ACCTATCTGAGGGAAT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","T3M I104Y Y121H Y178L K198N K199*",6
"lib2","SARS-CoV-2","ACCTATGAACTAGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N120* V153F",2
"lib2","SARS-CoV-2","ACCTATGAAGACACTT",3,45.14,10.85,0.01,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTATGACAGAAGTC",3,1.09,NA,NA,NA,NA,NA,NA,"stop","P149* A190T",2
"lib2","SARS-CoV-2","ACCTATGATGTTAAAT",8,120.55,6,-4.84,1.1,2.61,1.16,0,">1 nonsynonymous","T3C Y21K S36L K48L",4
"lib2","SARS-CoV-2","ACCTATGCAGAACTCG",12,146.72,9.82,-1.01,0.05,2.96,1.07,0,">1 nonsynonymous","S36G F156N",2
"lib2","SARS-CoV-2","ACCTATGCTAACAGAA",5,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G Y93N V180E",3
"lib2","SARS-CoV-2","ACCTATGGAACCAGCA",7,33.65,6.88,-3.95,0.43,1.5,1.16,0.04,">1 nonsynonymous","T3H V11Y R127S P133H T201W",5
"lib2","SARS-CoV-2","ACCTATTAGTAAAATG",6,57.73,9.88,-0.96,0.1,2.23,1,0.01,"1 nonsynonymous","R127N",1
"lib2","SARS-CoV-2","ACCTATTCATAACATG",3,0,NA,NA,NA,NA,NA,NA,"stop","R27* P96W K198R",3
"lib2","SARS-CoV-2","ACCTATTGAATACTTT",1,13.97,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F8N V37K V103E N118F K198R",5
"lib2","SARS-CoV-2","ACCTATTGCAATCAGA",3,14.09,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9C W23M K94L Y119V Y143L T148L",6
"lib2","SARS-CoV-2","ACCTATTTAAACGTGA",3,44.93,10.85,0.01,0.08,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTATTTATCGCACT",12,55.01,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D98V W106D Y119T N151G",4
"lib2","SARS-CoV-2","ACCTATTTATGGCACG",13,317.76,9.05,-1.78,0.04,2.91,1.05,0,">1 nonsynonymous","P7N T55R G117L A190M G196K",5
"lib2","SARS-CoV-2","ACCTATTTCGGAACCT",12,106.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12V D112R R127G",3
"lib2","SARS-CoV-2","ACCTCAAAACCCCTCA",9,86.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51I D98L C158M",3
"lib2","SARS-CoV-2","ACCTCAAAAGAAAAAC",1,18.13,9.24,-1.6,0.09,1.97,1.03,0.01,">1 nonsynonymous","S19M A67C",2
"lib2","SARS-CoV-2","ACCTCAAAATTACTAA",8,48.55,9.99,-0.85,0.11,2.21,1,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","ACCTCAAACCGGGTGC",1,23.82,10.62,-0.22,0.06,3,1.01,0,">1 nonsynonymous","A33V N58Q",2
"lib2","SARS-CoV-2","ACCTCAAATTTAACGG",9,30.7,9.69,-1.15,0.12,1.8,1.02,0.01,">1 nonsynonymous","E10L N13S V115K S184C",4
"lib2","SARS-CoV-2","ACCTCAAATTTTAGGG",1,5.15,9.5,-1.34,0.26,2.39,1,0.01,"1 nonsynonymous","A81Y",1
"lib2","SARS-CoV-2","ACCTCAAATTTTTCAA",5,23.26,NA,NA,NA,NA,NA,NA,"stop","A33R G51* S113Y",3
"lib2","SARS-CoV-2","ACCTCAAGCATACGCA",2,22.19,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V37D N151Q L162P",3
"lib2","SARS-CoV-2","ACCTCAATCAACAGAA",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19V L95P N151V G155I",4
"lib2","SARS-CoV-2","ACCTCAATCTACAGTA",7,127,9.86,-0.98,0.05,2.9,1.03,0,">1 nonsynonymous","I104Y Y119K",2
"lib2","SARS-CoV-2","ACCTCAATCTTATGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","G86L K114* F185N",3
"lib2","SARS-CoV-2","ACCTCAATGACTATGT",6,0.65,NA,NA,NA,NA,NA,NA,"stop","C6* A81K D90H",3
"lib2","SARS-CoV-2","ACCTCAATTTAGCAAG",9,94.73,7.96,-2.87,0.13,1.63,1.09,0.01,">1 nonsynonymous","Y50I T63I Q168E K198H",4
"lib2","SARS-CoV-2","ACCTCACAAGTACAAA",10,31.24,6,-4.84,0.73,3,1.11,0,">1 nonsynonymous","L57V D68R",2
"lib2","SARS-CoV-2","ACCTCACAATCATAGG",12,157.97,8.82,-2.02,0.23,1.51,1.13,0.02,">1 nonsynonymous","A42W F62L Y123L Y178V A190R T201K",6
"lib2","SARS-CoV-2","ACCTCACATACTACCC",2,15.16,10.76,-0.08,0.13,2.99,1.01,0.01,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","ACCTCACGATCCATAC",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S R73T Q79L S139Y",4
"lib2","SARS-CoV-2","ACCTCACTTCATTGGG",1,3.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","ACCTCAGAAAACGGTC",7,85.99,8.85,-1.99,0.3,1.5,1,0.05,">1 nonsynonymous","N4R R25F",2
"lib2","SARS-CoV-2","ACCTCAGAAAAGGGAT",3,28.91,9.08,-1.75,0.14,1.92,1,0.01,">1 nonsynonymous","S41H T63M C102L F160R",4
"lib2","SARS-CoV-2","ACCTCAGAAATAAGAG",2,36.13,8.98,-1.86,0.1,2.86,1.06,0,">1 nonsynonymous","N58H N157S",2
"lib2","SARS-CoV-2","ACCTCAGACGGAAGCC",6,31.23,6.11,-4.73,0.69,1.5,1.18,0.02,">1 nonsynonymous","Y50T T55S D98A R179S",4
"lib2","SARS-CoV-2","ACCTCATAAAAGCTAC",4,94.53,10.36,-0.48,0.02,2.94,1.05,0,">1 nonsynonymous","Y123S L183I",2
"lib2","SARS-CoV-2","ACCTCATAAATTGTGA",4,46.55,6.04,-4.8,1.72,1.5,1.18,0.05,">1 nonsynonymous","S19Y R127W I138S Q144R L187F",5
"lib2","SARS-CoV-2","ACCTCATAATGTAGTG",2,41.64,10.79,-0.04,0.04,2.92,1.09,0,"1 nonsynonymous","S36H",1
"lib2","SARS-CoV-2","ACCTCATACTAGGGCC",2,46.23,9.36,-1.47,0.07,2.82,1.08,0,">1 nonsynonymous","T140G G152V",2
"lib2","SARS-CoV-2","ACCTCATACTATTGCC",3,59.2,8.3,-2.54,0.16,1.8,1.07,0.01,">1 nonsynonymous","N107K N118M",2
"lib2","SARS-CoV-2","ACCTCATACTGTCTCT",6,45.04,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N58I A105P K114R",3
"lib2","SARS-CoV-2","ACCTCATATTTCAGCC",2,64.98,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V11T V115L K132R C150T P161R Q176V",6
"lib2","SARS-CoV-2","ACCTCATGATGCCTCA",1,5.29,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","F99R F126Q",2
"lib2","SARS-CoV-2","ACCTCATGTACCTACA",4,30.24,10.3,-0.53,0.14,2.64,1,0.01,">1 nonsynonymous","L5M L60N T100S P149N",4
"lib2","SARS-CoV-2","ACCTCATTATACGCTT",2,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F Y66A A89S F99R S113Y F167C",6
"lib2","SARS-CoV-2","ACCTCCACGCATGGCC",1,3.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144R",1
"lib2","SARS-CoV-2","ACCTCCACGTGTAAAC",6,57.46,9.28,-1.56,0.09,2.07,1.18,0,">1 nonsynonymous","P7M A33H Y91W",3
"lib2","SARS-CoV-2","ACCTCCATATCTTACG",3,57.86,10.75,-0.08,0.04,2.95,1.05,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","ACCTCCATCAGACAAA",1,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N L60D G174T",3
"lib2","SARS-CoV-2","ACCTCCATTTAAATTT",7,61.9,8.19,-2.64,0.2,1.66,1.14,0.01,">1 nonsynonymous","A89T T140W P169V",3
"lib2","SARS-CoV-2","ACCTCCATTTTTAAAG",6,55.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G51I G86E K114A",3
"lib2","SARS-CoV-2","ACCTCCCGCCATCACA",1,8.3,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y35A V71R K132E K198S",4
"lib2","SARS-CoV-2","ACCTCCCTCACATGGA",4,51.55,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2Q L131R G152W",3
"lib2","SARS-CoV-2","ACCTCCCTCCGTACTT",6,64.07,8.34,-2.49,0.21,2.48,1.12,0.02,">1 nonsynonymous","K87V G116S N157S S164V",4
"lib2","SARS-CoV-2","ACCTCCGAAAAGCAGT",2,12.38,NA,NA,NA,NA,NA,0.27,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","ACCTCCTAATACCCCT",5,37.98,7.27,-3.56,0.33,1.5,1.01,0.03,">1 nonsynonymous","E10A I104W L122P",3
"lib2","SARS-CoV-2","ACCTCCTACCACTCGC",1,16.28,10.63,-0.2,0.04,3,1.04,0,">1 nonsynonymous","L122Y E135M",2
"lib2","SARS-CoV-2","ACCTCCTCTGGCGTTA",1,15.91,10.94,0.1,0.14,2.86,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACCTCGAAAGAAGGCT",6,73.07,10.29,-0.55,0.03,2.94,1.07,0,">1 nonsynonymous","C6N T201P",2
"lib2","SARS-CoV-2","ACCTCGACACCATGGA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","A22*",1
"lib2","SARS-CoV-2","ACCTCGACCACCTGAG",6,33.6,6.04,-4.8,1.06,1.5,1.21,0.02,">1 nonsynonymous","A105D L122K P149L F160L",4
"lib2","SARS-CoV-2","ACCTCGCAGATTCTGC",4,27.83,10.6,-0.23,0.05,2.89,1.11,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","ACCTCGCCCGACTCAA",6,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A R136S",2
"lib2","SARS-CoV-2","ACCTCGGACCCACAAG",1,21.99,10.07,-0.77,0.18,2.42,1.22,0.02,">1 nonsynonymous","C61V V153L",2
"lib2","SARS-CoV-2","ACCTCGGAGGAATACA",6,0.62,NA,NA,NA,NA,NA,NA,"stop","K56* N130S K198F",3
"lib2","SARS-CoV-2","ACCTCGGGCTCTCGAC",14,203.44,10.85,0.02,0.06,2.93,1.07,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","ACCTCGTAAAATCCTA",14,120.51,10.93,0.09,0.05,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTCGTAGAGGTACA",8,91.69,10.49,-0.34,0.06,2.91,1.03,0,">1 nonsynonymous","R27M I104A L122M",3
"lib2","SARS-CoV-2","ACCTCGTCCTGCAAAG",9,72.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103T N109R K128V K199I",4
"lib2","SARS-CoV-2","ACCTCTACATAATAAG",3,10.69,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","W23R A42P A81I K87C S164M",5
"lib2","SARS-CoV-2","ACCTCTACCAACCGTT",3,55.03,10.8,-0.04,0.1,2.82,1.1,0,">1 nonsynonymous","T148N T201N",2
"lib2","SARS-CoV-2","ACCTCTAGAACAATGG",4,0.74,NA,NA,NA,NA,NA,NA,"stop","N92G S113E T201*",3
"lib2","SARS-CoV-2","ACCTCTAGATTCGTCA",2,71.07,9.83,-1.01,0.09,2.46,1.04,0,"1 nonsynonymous","V65K",1
"lib2","SARS-CoV-2","ACCTCTAGGACGTTTT",12,241.99,10.84,0,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTCTAGTCACCAAT",3,113.31,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4F D34W G116A Y165A V173I",5
"lib2","SARS-CoV-2","ACCTCTATACGGGACT",3,27.16,9.78,-1.05,0.14,1.97,1.08,0.02,">1 nonsynonymous","F62L A105F",2
"lib2","SARS-CoV-2","ACCTCTATTCAATATA",3,41.56,7.16,-3.68,0.15,1.73,1.14,0.01,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","ACCTCTCATCAAACTG",5,49.36,9.22,-1.62,0.12,1.81,1.06,0.01,">1 nonsynonymous","N13K S19A K56I",3
"lib2","SARS-CoV-2","ACCTCTCCAGAGATGC",5,45.59,10.7,-0.14,0.05,2.97,1.04,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","ACCTCTCCTTGCACGT",10,7.25,NA,NA,NA,NA,NA,NA,"stop","Y35* K87I K94Y L122N",4
"lib2","SARS-CoV-2","ACCTCTCGATATATTG",2,27.83,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T63N L95F E141M P169M",4
"lib2","SARS-CoV-2","ACCTCTCGCTACCGAC",3,34.98,10.49,-0.34,0.05,2.89,1.02,0,">1 nonsynonymous","R27P S139N",2
"lib2","SARS-CoV-2","ACCTCTGCACAGCACA",2,94.5,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D112W F156D",2
"lib2","SARS-CoV-2","ACCTCTGTGATAGGGG",8,44.56,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","G9S G152A V182N",3
"lib2","SARS-CoV-2","ACCTCTTAGGATCCTG",5,30.23,6.3,-4.54,0.57,1.5,1.11,0.02,">1 nonsynonymous","D90F C102F F160R F167C",4
"lib2","SARS-CoV-2","ACCTCTTATAGCCTAA",4,61.96,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A14Y G101Y S164A",3
"lib2","SARS-CoV-2","ACCTCTTATTGATGTA",12,0.72,NA,NA,NA,NA,NA,NA,"stop","T15G Y66V I88V A190H P197*",5
"lib2","SARS-CoV-2","ACCTCTTCACATGGAG",2,0.17,NA,NA,NA,NA,NA,NA,"stop","A14D A105* N157Y P177S",4
"lib2","SARS-CoV-2","ACCTCTTGAACATAAT",5,11.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N107P S113L L183T",3
"lib2","SARS-CoV-2","ACCTCTTGACCTATTC",1,11.61,6.08,-4.75,1.67,1.5,1.34,0.05,">1 nonsynonymous","D68I R179S",2
"lib2","SARS-CoV-2","ACCTGAAAATTATTCG",3,21.08,10.93,0.1,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGAAAGCCATATC",3,43.67,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G86V Y119S P161M",3
"lib2","SARS-CoV-2","ACCTGAAATCCTAAGG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","V11F I72N A81F R127* E135L",5
"lib2","SARS-CoV-2","ACCTGAACGATGAATA",10,144.75,9.17,-1.67,0.03,2.98,1.08,0,">1 nonsynonymous","K87T N118S L122T",3
"lib2","SARS-CoV-2","ACCTGAACTATGGGTA",10,701.02,10.37,-0.46,0.02,2.88,1.01,0,">1 nonsynonymous","L60F P149I P191H",3
"lib2","SARS-CoV-2","ACCTGAAGCAAATTCA",2,25.7,8.84,-2,0.17,1.59,1.05,0.02,">1 nonsynonymous","F12A G152Y",2
"lib2","SARS-CoV-2","ACCTGAATACAGGATG",6,46.09,10.12,-0.72,0.11,2.67,1.1,0,">1 nonsynonymous","T100H E141I G155S",3
"lib2","SARS-CoV-2","ACCTGAATCAACCCTT",2,45.92,10.57,-0.27,0.04,2.95,1.07,0,">1 nonsynonymous","G83C G152S",2
"lib2","SARS-CoV-2","ACCTGAATCGAGGACC",2,134.41,10.78,-0.06,0.04,2.96,1.05,0,">1 nonsynonymous","S43R I138L",2
"lib2","SARS-CoV-2","ACCTGAATCGATAATA",4,10.43,10.72,-0.11,0.1,2.81,1.19,0.01,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","ACCTGACACATCATTC",10,0.42,NA,NA,NA,NA,NA,NA,"stop","R16F T46N A105* F167*",4
"lib2","SARS-CoV-2","ACCTGACCCCACCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1Q Y50* D98S S139R",4
"lib2","SARS-CoV-2","ACCTGACGTAAGGTGA",4,87.25,10.88,0.04,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGACTATATGATC",3,41.16,10.79,-0.05,0.06,3,1.03,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","ACCTGACTATATTAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","ACCTGAGCTTTAAACA",10,37.36,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","V20K K26E S41Y L122S S129R",5
"lib2","SARS-CoV-2","ACCTGAGGACAAAAGT",2,49.42,8.21,-2.63,0.26,1.55,1.15,0.03,">1 nonsynonymous","C6I D90S Y119A",3
"lib2","SARS-CoV-2","ACCTGAGGAGAAACAT",13,120.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F99M A145V C150L",3
"lib2","SARS-CoV-2","ACCTGATACCATATTC",9,111.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R73A K94I G174K V182M",4
"lib2","SARS-CoV-2","ACCTGATACGACCTTA",7,0.97,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","ACCTGATATAGTCAAG",7,86.02,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14D N40Q D90F T100D N107V Y143W",6
"lib2","SARS-CoV-2","ACCTGATTGACTTATT",4,149.27,10.86,0.02,0.04,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGATTTAGCTAGC",2,93.12,10.79,-0.05,0.05,2.91,1.1,0,">1 nonsynonymous","A42R V71I",2
"lib2","SARS-CoV-2","ACCTGCAAACCGTTCC",8,83.36,9.11,-1.73,0.07,1.87,1.03,0,">1 nonsynonymous","F134C F185G",2
"lib2","SARS-CoV-2","ACCTGCACATAGGTTT",8,81.39,10.61,-0.22,0.05,2.95,1.05,0,">1 nonsynonymous","C61H I80V",2
"lib2","SARS-CoV-2","ACCTGCAGGAAACGAA",3,20.64,10.57,-0.26,0.13,2.85,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGCATACCAATAC",1,36.3,10.78,-0.06,0.03,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGCCAAAACCAGC",5,57.05,10.52,-0.31,0.05,2.86,1.07,0,">1 nonsynonymous","G83Y Y123W",2
"lib2","SARS-CoV-2","ACCTGCCATTTATGAT",4,105.17,10.22,-0.62,0.04,2.89,1.02,0,">1 nonsynonymous","A14I S184I",2
"lib2","SARS-CoV-2","ACCTGCCCGCGCGATT",3,104.47,8.14,-2.7,0.14,2.34,1.11,0.01,">1 nonsynonymous","A89C Y175M",2
"lib2","SARS-CoV-2","ACCTGCCGAGCTACAG",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L L162F",2
"lib2","SARS-CoV-2","ACCTGCCTCAAGATAA",1,16.02,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","C6R S45L R136L",3
"lib2","SARS-CoV-2","ACCTGCCTTAGGAGGT",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGCCTTCGTTACA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","T3E T15* A81S Y93* C158Y",5
"lib2","SARS-CoV-2","ACCTGCCTTCTCGACT",1,5.59,9.43,-1.4,0.32,1.67,1.38,0.04,">1 nonsynonymous","T85S L95N W106S F160G Y175W K199R",6
"lib2","SARS-CoV-2","ACCTGCCTTGATCTTG",2,12.46,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N1L D59L N92K S113D L131P",5
"lib2","SARS-CoV-2","ACCTGCGACAACGTTA",1,16.96,6,-4.84,1.22,1.5,1.17,0.01,">1 nonsynonymous","P96W L111T P197W",3
"lib2","SARS-CoV-2","ACCTGCGAGTTAGCAT",9,166.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55N C158I",2
"lib2","SARS-CoV-2","ACCTGCGCACTGAAAA",5,18.42,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","S41P K56E F167S P197A",4
"lib2","SARS-CoV-2","ACCTGCGTTACACAAT",5,24.84,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","G51E Y91L Y121I K132Y",4
"lib2","SARS-CoV-2","ACCTGCTCCGGATGTG",1,9.93,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A14T Y50L K128R S184E T201L",5
"lib2","SARS-CoV-2","ACCTGGACGTAATTCG",5,55.34,9.54,-1.3,0.08,1.97,1.07,0,">1 nonsynonymous","A105N S129N",2
"lib2","SARS-CoV-2","ACCTGGATACATTTGA",6,108.54,9.71,-1.13,0.06,2.29,1.06,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","ACCTGGATCACCTCAA",4,5.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42F F99T V103S G117S Y123W",5
"lib2","SARS-CoV-2","ACCTGGCACGTGACCA",2,23.41,8.68,-2.16,0.07,2.87,1.05,0,">1 nonsynonymous","D90T G166M",2
"lib2","SARS-CoV-2","ACCTGGCAGAACCTTA",6,210.28,10.05,-0.79,0.04,2.81,1.03,0,">1 nonsynonymous","T3R F44S Y175F",3
"lib2","SARS-CoV-2","ACCTGGGCAGGATCTA",2,21.36,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L5F V115W G146A L183C",4
"lib2","SARS-CoV-2","ACCTGGGCCCCGCCAA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","Y35* I88* Y119W C158T",4
"lib2","SARS-CoV-2","ACCTGGTCCTCTTGTT",4,101.7,6.19,-4.64,0.62,1.5,1.08,0.01,">1 nonsynonymous","Y39S Y121R F134C",3
"lib2","SARS-CoV-2","ACCTGTAACTTGAACT",11,104.18,9.49,-1.34,0.06,2.84,1.13,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","ACCTGTACTAAAACTG",2,7.25,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V20L S45D P96Y L131F",4
"lib2","SARS-CoV-2","ACCTGTATAAGTAAGA",1,54.97,10.84,0,0.04,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTGTATGATATACA",3,42.91,10.23,-0.6,0.07,2.74,1,0,">1 nonsynonymous","S139I T201K",2
"lib2","SARS-CoV-2","ACCTGTCCATAGACGG",4,18.55,7.79,-3.05,0.24,1.55,1.21,0.02,">1 nonsynonymous","N1M I88L S164C",3
"lib2","SARS-CoV-2","ACCTGTCCCTGCGGAT",9,25.75,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A18M A42T A89P C102Q S129V",5
"lib2","SARS-CoV-2","ACCTGTGAATAGACAC",2,90.09,9.82,-1.01,0.09,2.33,1.05,0,">1 nonsynonymous","T63K A89G",2
"lib2","SARS-CoV-2","ACCTGTGAATCACATT",12,208.33,8.48,-2.35,0.09,2.49,1.07,0,">1 nonsynonymous","A14L L125Y",2
"lib2","SARS-CoV-2","ACCTGTTAACGAAAAA",6,1.89,NA,NA,NA,NA,NA,NA,"stop","F17* P96* P149T Q176D",4
"lib2","SARS-CoV-2","ACCTGTTACATTTGTC",5,113.02,8.16,-2.67,0.15,1.8,1.09,0.01,">1 nonsynonymous","G9R N107L",2
"lib2","SARS-CoV-2","ACCTGTTCAAAATTAT",2,9.02,10.88,0.04,0.09,2.95,1.09,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","ACCTGTTGAAATTAGC",2,26.99,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S45W G86I G101N G146N",4
"lib2","SARS-CoV-2","ACCTGTTTAAATTAAA",6,1.86,NA,NA,NA,NA,NA,NA,"stop","A14Y N64* D98H",3
"lib2","SARS-CoV-2","ACCTGTTTAACCGGGC",4,14.39,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N13M G51D R136V",3
"lib2","SARS-CoV-2","ACCTTAAAAAGCAATC",1,0.65,NA,NA,NA,NA,NA,NA,"stop","G9* N110V N120G P133M Y178L S184E",6
"lib2","SARS-CoV-2","ACCTTAAAATAAAACA",9,22.72,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K94L G101P K132Y",3
"lib2","SARS-CoV-2","ACCTTAAAATTGCTAT",19,269.82,9.79,-1.05,0.04,2.91,1.08,0,">1 nonsynonymous","T46Y K87E",2
"lib2","SARS-CoV-2","ACCTTAAACCTTCAAG",5,57.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I80F Y178G T201L",3
"lib2","SARS-CoV-2","ACCTTAAACGCAAGTA",5,83.07,10.47,-0.37,0.04,2.92,1.05,0,">1 nonsynonymous","F62T S129P",2
"lib2","SARS-CoV-2","ACCTTAAAGTAGAACT",1,24.47,6,-4.84,2,3,1.13,0,"1 nonsynonymous","Y159S",1
"lib2","SARS-CoV-2","ACCTTAACAAATGCGC",5,100.2,10.81,-0.02,0.04,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCTTAACAAGTCCGC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","G9D L60* N151Q F185V",4
"lib2","SARS-CoV-2","ACCTTAACCCGTAAAA",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T S19V V115T",3
"lib2","SARS-CoV-2","ACCTTAAGAAAACTAG",3,34.92,8.4,-2.44,0.18,1.52,1.11,0.02,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","ACCTTAAGAAGAAAGC",9,35.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14V P54S G83A Y119A N130K I138F",6
"lib2","SARS-CoV-2","ACCTTAAGCACGTACA",1,15.25,7.02,-3.81,0.36,1.5,1.15,0.03,">1 nonsynonymous","Y119S N157M",2
"lib2","SARS-CoV-2","ACCTTAATAAAAATTA",3,70.01,9.67,-1.17,0.06,1.78,1.08,0,">1 nonsynonymous","S41T N58R Q84W T148A",4
"lib2","SARS-CoV-2","ACCTTAATAAGACGAA",14,290.7,10.81,-0.03,0.03,2.94,1.07,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","ACCTTAATACTCTGTT",2,63.46,10.66,-0.18,0.04,2.87,1.13,0,">1 nonsynonymous","K56V E141N",2
"lib2","SARS-CoV-2","ACCTTAATGAGATTTT",12,96.59,6.48,-4.36,0.4,1.5,1.21,0.01,">1 nonsynonymous","F17W S45R Y93F S108T I142M G152N",6
"lib2","SARS-CoV-2","ACCTTAATTGGATAAA",1,10.7,10.48,-0.36,0.08,2.96,1.04,0,">1 nonsynonymous","D98G T148M",2
"lib2","SARS-CoV-2","ACCTTACACTATCTTT",6,74.6,9.84,-1,0.04,2.85,1.06,0,">1 nonsynonymous","P149Q G155C",2
"lib2","SARS-CoV-2","ACCTTACAGATCACAT",1,9.34,10.66,-0.18,0.25,2.44,1.01,0.02,">1 nonsynonymous","K26M A105Y",2
"lib2","SARS-CoV-2","ACCTTACAGTCACGAA",4,54.91,10.71,-0.12,0.05,2.85,1.12,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","ACCTTACATCGCCATT",3,1.06,NA,NA,NA,NA,NA,NA,"stop","S19L S36L W106N Y119*",4
"lib2","SARS-CoV-2","ACCTTACCATTTCTTA",11,148.95,8.41,-2.42,0.14,2.6,1.09,0.01,">1 nonsynonymous","N157C T201G",2
"lib2","SARS-CoV-2","ACCTTACCGACTGGAC",3,58.2,8.78,-2.05,0.08,1.88,1.07,0,">1 nonsynonymous","C6R A14I T55A V173G",4
"lib2","SARS-CoV-2","ACCTTACGGATGGGAG",2,6.68,11.02,0.19,0.17,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTTACTATTATGGC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","ACCTTAGACGAACATG",9,108.44,10.71,-0.12,0.05,2.93,1.08,0,">1 nonsynonymous","V52L A192K T201V",3
"lib2","SARS-CoV-2","ACCTTAGACTAGTGAG",4,1.03,NA,NA,NA,NA,NA,NA,"stop","Y21S V115*",2
"lib2","SARS-CoV-2","ACCTTAGGACTCGAGT",3,3.68,NA,NA,NA,NA,NA,NA,"stop","T85P D97* C158V",3
"lib2","SARS-CoV-2","ACCTTATAAAAAATAT",7,31.43,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F62I Y93S",2
"lib2","SARS-CoV-2","ACCTTATAAAGAAACA",3,60.54,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G9Y A22E T85R C150L",4
"lib2","SARS-CoV-2","ACCTTATAAGTACAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","ACCTTATACACCGAAT",6,85.34,8.62,-2.22,0.08,3,1.04,0,">1 nonsynonymous","F160P T170L L187Y T201E",4
"lib2","SARS-CoV-2","ACCTTATAGAAGGAAT",3,37.3,10.81,-0.02,0.12,2.84,1.13,0.01,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ACCTTATCGAGTTTAG",9,208.29,10.32,-0.52,0.04,2.87,1.05,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","ACCTTATGAAATAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W C49N D90R W106G",4
"lib2","SARS-CoV-2","ACCTTATTACAAAACA",1,12.7,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F47V D68E N107V I142Y",4
"lib2","SARS-CoV-2","ACCTTCAAAAGATAGA",5,42.02,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D68V Y91E E135S",3
"lib2","SARS-CoV-2","ACCTTCAACAAGAGAG",5,1.07,NA,NA,NA,NA,NA,NA,"stop","T170L Y178*",2
"lib2","SARS-CoV-2","ACCTTCAAGAGACAGA",1,11.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K W106C Y119R",3
"lib2","SARS-CoV-2","ACCTTCACATACAGGC",18,192.78,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P82K N157T",2
"lib2","SARS-CoV-2","ACCTTCATAAAGTATA",6,79.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33H N109M Y143K F160T",4
"lib2","SARS-CoV-2","ACCTTCATATAATACA",16,0.96,NA,NA,NA,NA,NA,NA,"stop","K94S R127T K132*",3
"lib2","SARS-CoV-2","ACCTTCATTACAGGAG",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L T46K V103T S108D C158Q",5
"lib2","SARS-CoV-2","ACCTTCCAAAGTCCCG",1,51.24,10.83,-0.01,0.06,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","ACCTTCCACTCTTGCG",16,248.36,10.8,-0.03,0.05,2.94,1.07,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","ACCTTCCAGATAGGCG",9,35.68,6.52,-4.31,0.45,1.5,1.23,0.02,">1 nonsynonymous","F12V A42W Y50K K94A N120P G152S E186W T201P",8
"lib2","SARS-CoV-2","ACCTTCCGGTTTAATA",10,100.11,6.21,-4.62,0.8,1.5,1.21,0.03,">1 nonsynonymous","I2T G51A D112C N130W E154L",5
"lib2","SARS-CoV-2","ACCTTCGAACATCAAA",5,18.19,11,0.16,0.08,2.93,1.06,0,">1 nonsynonymous","G9S Q168W",2
"lib2","SARS-CoV-2","ACCTTCGAACCACAGT",1,38.69,10.7,-0.14,0.03,3,1.02,0,">1 nonsynonymous","L5P F160L",2
"lib2","SARS-CoV-2","ACCTTCGATAGATAGA",3,16.32,10.79,-0.04,0.07,2.88,1.08,0,">1 nonsynonymous","N1D F160P",2
"lib2","SARS-CoV-2","ACCTTCGCGACTACTT",6,44.61,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V71K V77L S108T G155Y A190C",5
"lib2","SARS-CoV-2","ACCTTCGGGGCTCGTT",6,24.77,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y35S N64T G86L N120A",4
"lib2","SARS-CoV-2","ACCTTCGTAAGCCTAC",17,114.28,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","L60R V103F G152V",3
"lib2","SARS-CoV-2","ACCTTCTAATAAAAGT",1,1.93,NA,NA,NA,NA,NA,NA,"stop","C6E Y39S E76* N130A K198F",5
"lib2","SARS-CoV-2","ACCTTCTATGCTTCCG",18,240.08,10.88,0.05,0.05,2.9,1.07,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","ACCTTCTATGGTGTCG",3,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G N64S K87T L95T L122F G146W",6
"lib2","SARS-CoV-2","ACCTTCTCGAAGTCTA",12,126.21,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","F167I",1
"lib2","SARS-CoV-2","ACCTTCTGAGCTATTC",4,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V C102E P149S",3
"lib2","SARS-CoV-2","ACCTTCTGCGTCCATC",9,37.58,6,-4.84,1.07,3,1.18,0.01,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","ACCTTCTGGTAGGCCG",15,48.93,8.48,-2.36,0.1,1.75,1.12,0,">1 nonsynonymous","A33T P133A G152L T170Y",4
"lib2","SARS-CoV-2","ACCTTCTTCCTACATC",6,134,10.71,-0.13,0.02,2.9,1.1,0,"1 nonsynonymous","H189I",1
"lib2","SARS-CoV-2","ACCTTGAAAAGAAAAA",5,19.84,8.25,-2.58,0.22,1.5,1.09,0.03,">1 nonsynonymous","A67Y A81G A89S",3
"lib2","SARS-CoV-2","ACCTTGAAAAGTCATT",3,9.87,10.81,-0.02,0.07,3,1.02,0,">1 nonsynonymous","K48R K128N S184H",3
"lib2","SARS-CoV-2","ACCTTGAAAATGCCAT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","F62N G83V V115*",3
"lib2","SARS-CoV-2","ACCTTGAAAGTCCCAA",10,76.84,6,-4.84,2,3,1.21,0,">1 nonsynonymous","P82A G172L",2
"lib2","SARS-CoV-2","ACCTTGAAATGCAGCC",18,5.56,NA,NA,NA,NA,NA,NA,"stop","Y93S G117* Q144S",3
"lib2","SARS-CoV-2","ACCTTGAATCCATCTT",4,24.48,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A33G F44M A67P T85S D112T",5
"lib2","SARS-CoV-2","ACCTTGATAATTACGA",1,15.85,10.33,-0.51,0.07,2.89,1.08,0,">1 nonsynonymous","V65L G83D T201V",3
"lib2","SARS-CoV-2","ACCTTGATCACATCAA",6,15.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77W Y93M V103H E135D",4
"lib2","SARS-CoV-2","ACCTTGATCGACCGCG",4,72.66,10.97,0.14,0.06,2.95,1.04,0,">1 nonsynonymous","A190V P197I",2
"lib2","SARS-CoV-2","ACCTTGCAACGTTAAA",10,38.37,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D97R G116S R124H",3
"lib2","SARS-CoV-2","ACCTTGCCAACCCCTA",4,25.96,6.18,-4.65,0.29,1.5,1.06,0,">1 nonsynonymous","P7T S36M A105D",3
"lib2","SARS-CoV-2","ACCTTGCGCGATACAC",1,18.52,10.86,0.02,0.06,2.98,1.03,0,"1 nonsynonymous","K48N",1
"lib2","SARS-CoV-2","ACCTTGCTCCAAACAA",6,45.15,8.18,-2.65,0.24,1.5,1.1,0.02,"1 nonsynonymous","I72S",1
"lib2","SARS-CoV-2","ACCTTGCTTATGAAAT",5,106.95,8.59,-2.25,0.08,2.82,1.07,0,"1 nonsynonymous","Y143N",1
"lib2","SARS-CoV-2","ACCTTGGCCGCGAACA",5,64.95,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y21G I88S H189Y",3
"lib2","SARS-CoV-2","ACCTTGGCTATTCACG",14,13.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22I D112Q",2
"lib2","SARS-CoV-2","ACCTTGGGACAAAATG",6,148.12,9.24,-1.59,0.09,2.54,1.1,0,">1 nonsynonymous","Y35T K87N F134S",3
"lib2","SARS-CoV-2","ACCTTGGGCCACTTTA",2,19.58,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10H C49F C61M G86P",4
"lib2","SARS-CoV-2","ACCTTGGGTTTTTTAT",6,49.29,6,-4.84,1.33,1.5,1.16,0.02,">1 nonsynonymous","F47M S147R F156S F167R F185T",5
"lib2","SARS-CoV-2","ACCTTGGTATCCTAGT",6,180.55,10.15,-0.69,0.05,2.82,1.01,0,">1 nonsynonymous","G9K D34T",2
"lib2","SARS-CoV-2","ACCTTGTCGCACATTC",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S D34T Y143L",3
"lib2","SARS-CoV-2","ACCTTTAAATATGAAG",3,50.35,10.79,-0.04,0.06,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTTTAAGTCCTACC",18,357.38,10.84,0.01,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTTTAATCCCCGAC",3,10.26,11.09,0.25,0.11,2.98,1,0.01,">1 nonsynonymous","N110K N120S",2
"lib2","SARS-CoV-2","ACCTTTAATTGTAGGC",1,40.39,8.76,-2.07,0.08,2.95,1.09,0,">1 nonsynonymous","N1T G155T G166Q",3
"lib2","SARS-CoV-2","ACCTTTACACGCTTCC",6,65.98,8.29,-2.54,0.15,2.55,1.18,0.01,">1 nonsynonymous","N120V G146K",2
"lib2","SARS-CoV-2","ACCTTTACAGGTAGAC",1,6.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L S113L G174S",3
"lib2","SARS-CoV-2","ACCTTTACCTTTAACT",2,25.77,9.27,-1.57,0.1,1.89,1.14,0,">1 nonsynonymous","K87F D137C",2
"lib2","SARS-CoV-2","ACCTTTACGTGTCCTT",9,167.72,10.49,-0.35,0.05,2.92,1.04,0,">1 nonsynonymous","L5R E10H",2
"lib2","SARS-CoV-2","ACCTTTACTACATCAC",4,21.82,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V71D Q84R",2
"lib2","SARS-CoV-2","ACCTTTACTTAATCCA",9,101.17,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35K G51C R73V",3
"lib2","SARS-CoV-2","ACCTTTAGCCAAAATA",2,40.14,10.85,0.01,0.06,2.94,1.03,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","ACCTTTAGCGTACAGT",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S N92R K114M N151Q",4
"lib2","SARS-CoV-2","ACCTTTAGTTGAAACA",4,49.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37A P82N F134I",3
"lib2","SARS-CoV-2","ACCTTTATAATAAGCT",5,31.41,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","F12H K87S V103Q",3
"lib2","SARS-CoV-2","ACCTTTCAATTCGACC",3,46.16,9.2,-1.64,0.07,2.82,1.05,0,">1 nonsynonymous","A42C K87D N120A",3
"lib2","SARS-CoV-2","ACCTTTCATGTCTTGA",3,28.17,7.71,-3.13,0.32,1.5,1.08,0.03,">1 nonsynonymous","G74V V173M",2
"lib2","SARS-CoV-2","ACCTTTCCATCATGTG",10,89.07,10.82,-0.01,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTTTCGATTGTGGT",2,59.81,10.49,-0.34,0.05,2.9,1.1,0,">1 nonsynonymous","V37E K87T A105S P149V",4
"lib2","SARS-CoV-2","ACCTTTCTAATACAAT",5,84.22,10.78,-0.06,0.03,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACCTTTCTCTCCGTCG",9,199.26,7.83,-3.01,0.13,1.64,1.1,0.01,">1 nonsynonymous","N4T F62P G116Y P149C N157Q",5
"lib2","SARS-CoV-2","ACCTTTCTGTCCCACA",10,0.92,NA,NA,NA,NA,NA,NA,"stop","N24Y Y93S G146*",3
"lib2","SARS-CoV-2","ACCTTTGAAGAGACTT",4,134.68,8.67,-2.17,0.04,2.75,1.05,0,">1 nonsynonymous","S36P C61L T140M G166S V173E",5
"lib2","SARS-CoV-2","ACCTTTGACAGGTAAC",1,17.93,10.49,-0.34,0.1,2.52,1.31,0.01,">1 nonsynonymous","T15Q N64E",2
"lib2","SARS-CoV-2","ACCTTTGATAAGATAA",9,97.73,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14V Y39N F44P A89S D90L G117S",6
"lib2","SARS-CoV-2","ACCTTTGCAAGGGAGG",3,24.83,10.83,0,0.1,2.89,1.12,0,"1 nonsynonymous","K198A",1
"lib2","SARS-CoV-2","ACCTTTGCACTCTCCT",1,5.47,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","F12N N107H",2
"lib2","SARS-CoV-2","ACCTTTGGAGTCCAGG",4,2.54,NA,NA,NA,NA,NA,NA,"stop","A18* D97E A105* I142T",4
"lib2","SARS-CoV-2","ACCTTTGGCGGCTACC",7,32.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103W E154G",2
"lib2","SARS-CoV-2","ACCTTTTAATATAGTA",9,224.24,9.93,-0.9,0.05,2.67,1.06,0,"1 nonsynonymous","Y21Q",1
"lib2","SARS-CoV-2","ACCTTTTAGGGATGTG",1,17.32,9.87,-0.97,0.47,1.5,1.08,0.07,">1 nonsynonymous","F8H S53F",2
"lib2","SARS-CoV-2","ACCTTTTATCTAAACA",5,69.09,8.57,-2.26,0.18,2.34,1.11,0.01,">1 nonsynonymous","A14C D90S Y119T",3
"lib2","SARS-CoV-2","ACCTTTTTAACGTCTA",11,210.5,10.84,0,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAAAAAAAAAGGGA",3,36.87,10.96,0.12,0.07,3,1.02,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","ACGAAAAAAACCAATA",6,53.33,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2R Y50L D98W F126V",4
"lib2","SARS-CoV-2","ACGAAAAACATGACGT",7,80.34,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y50S Y123I",2
"lib2","SARS-CoV-2","ACGAAAAACGGTTTTA",2,19.42,9.22,-1.62,0.16,2.09,1.08,0.01,">1 nonsynonymous","L38Y N107K",2
"lib2","SARS-CoV-2","ACGAAAAACTACTAAT",9,96.67,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F44L Y50S I138G",3
"lib2","SARS-CoV-2","ACGAAAAAGTAAAATT",6,29.75,6.82,-4.01,0.34,1.5,1.21,0.02,">1 nonsynonymous","C61W A105L V115T",3
"lib2","SARS-CoV-2","ACGAAAAATAATGCCT",2,99.44,10.45,-0.39,0.05,2.94,1.04,0,">1 nonsynonymous","G9K F44L",2
"lib2","SARS-CoV-2","ACGAAAAATATATAGC",4,67.11,9.76,-1.07,0.04,3,1,0,">1 nonsynonymous","D98M F156S",2
"lib2","SARS-CoV-2","ACGAAAAATCCAATCA",1,7.11,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","Y50Q G155N V181A",3
"lib2","SARS-CoV-2","ACGAAAAATTCGGTTA",2,11.04,10.54,-0.29,0.09,2.14,1,0,">1 nonsynonymous","L38R C61T",2
"lib2","SARS-CoV-2","ACGAAAACAAATCAAT",20,152.22,6.89,-3.94,0.23,1.5,1.15,0.01,">1 nonsynonymous","Y21S D97L G117L",3
"lib2","SARS-CoV-2","ACGAAAACAATAATCG",6,13.13,NA,NA,NA,NA,NA,NA,"stop","L5* S69K N107T",3
"lib2","SARS-CoV-2","ACGAAAACCCTCTGTA",3,12.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T55N G74T V103S Y165A",4
"lib2","SARS-CoV-2","ACGAAAACCGAACTGT",18,85.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4L T15L P82D R136H",4
"lib2","SARS-CoV-2","ACGAAAACGATGTTAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","Y50T T55* F62R",3
"lib2","SARS-CoV-2","ACGAAAACGCTAAAAT",6,43.39,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T63D S147L C150Y E154D T170A",5
"lib2","SARS-CoV-2","ACGAAAAGATGAATTG",10,1.97,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACGAAAATATCCAATA",4,31.13,10.62,-0.21,0.09,2.94,1.11,0,">1 nonsynonymous","L5Q L60G T85K",3
"lib2","SARS-CoV-2","ACGAAACAACCAATCC",5,11.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T46G D98L E154A",3
"lib2","SARS-CoV-2","ACGAAACAATGTTTAC",2,12.19,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L38A S69Y Y93N T140P",4
"lib2","SARS-CoV-2","ACGAAACACGAAATAA",6,0.57,NA,NA,NA,NA,NA,NA,"stop","Y66* V77L W106S L122F V182H",5
"lib2","SARS-CoV-2","ACGAAACAGATTGTTA",5,109.92,10.07,-0.77,0.06,2.15,1.04,0,">1 nonsynonymous","W106L T201S",2
"lib2","SARS-CoV-2","ACGAAACAGTGTATTT",1,21.93,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","Y39R C61A D97A W106S N118T T148V",6
"lib2","SARS-CoV-2","ACGAAACATAATGTAA",9,114.64,8.04,-2.8,0.15,1.5,1.06,0.01,">1 nonsynonymous","F44S D90S N118Y T148S",4
"lib2","SARS-CoV-2","ACGAAACATACTTTTC",4,19.19,10.45,-0.38,0.08,2.83,1.16,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","ACGAAACATTAAATTT",1,9.78,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","I2V A42M D137T Y165I K198G",5
"lib2","SARS-CoV-2","ACGAAACCAGAATCAA",1,9.43,6.88,-3.96,0.28,2.26,1.13,0.01,">1 nonsynonymous","Y39K G86L",2
"lib2","SARS-CoV-2","ACGAAACCCTTAGTTT",4,28.67,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y35E P54K D68G D97V V103G K114L Y123F F167S",8
"lib2","SARS-CoV-2","ACGAAACCTGATGATT",6,7.51,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","F17S I142Y F156A F167R",4
"lib2","SARS-CoV-2","ACGAAACGAAGGATAA",4,58.36,8.63,-2.21,0.1,3,1.03,0,"1 nonsynonymous","N157M",1
"lib2","SARS-CoV-2","ACGAAACGCACTGAAA",3,57.93,6.98,-3.85,0.43,1.5,1.15,0.03,"1 nonsynonymous","D137R",1
"lib2","SARS-CoV-2","ACGAAACTGACACACC",3,34.95,6.13,-4.7,1.61,1.5,1.33,0.05,">1 nonsynonymous","F62Y Y93M",2
"lib2","SARS-CoV-2","ACGAAACTTAAAGCTT",6,72.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V103I Y121C L162E",3
"lib2","SARS-CoV-2","ACGAAAGAACTAGCGT",20,350.19,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39A K56F A89V E141I F167W",5
"lib2","SARS-CoV-2","ACGAAAGAAGGAATTT",2,37.95,10.81,-0.02,0.06,2.9,1.12,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","ACGAAAGATAACCTAG",3,60.96,10.22,-0.62,0.04,2.84,1.01,0,"1 nonsynonymous","Q144Y",1
"lib2","SARS-CoV-2","ACGAAAGATCTCTCTT",6,68.94,10.39,-0.45,0.05,2.84,1.11,0,">1 nonsynonymous","A18G S41N F47Y P54M",4
"lib2","SARS-CoV-2","ACGAAAGCAATTTTAA",4,40.95,10.46,-0.38,0.05,2.95,1.01,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","ACGAAAGCTGGCCACT",2,28.98,9.82,-1.02,0.12,2.59,1.17,0.01,">1 nonsynonymous","F44C N130Q",2
"lib2","SARS-CoV-2","ACGAAAGCTTGTACTT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","L60M I88F D97* G117K",4
"lib2","SARS-CoV-2","ACGAAAGGGTGTTGCC",8,142.12,6.11,-4.72,0.5,1.5,1.19,0.01,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","ACGAAAGGTGATCGCT",4,72.1,10.69,-0.15,0.03,2.94,1.09,0,"1 nonsynonymous","T140G",1
"lib2","SARS-CoV-2","ACGAAAGTAAAGTCAT",13,150.84,8.23,-2.61,0.1,2.18,1.06,0,">1 nonsynonymous","F126Y P161T",2
"lib2","SARS-CoV-2","ACGAAAGTTGAAACAT",1,9.92,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P7V S45K P96M V103Y V153L Y165H V173D",7
"lib2","SARS-CoV-2","ACGAAATAACAGATGT",5,94.55,10.66,-0.18,0.04,2.91,1.07,0,"1 nonsynonymous","K114D",1
"lib2","SARS-CoV-2","ACGAAATAACATAGGA",8,37.98,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","V32Q P82A W106H",3
"lib2","SARS-CoV-2","ACGAAATAATCCAGCG",5,19.96,6,-4.84,1.41,1.5,1.31,0.03,">1 nonsynonymous","A18T T55D F156S L183S",4
"lib2","SARS-CoV-2","ACGAAATATATCAAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib2","SARS-CoV-2","ACGAAATATTAACATA",1,2.17,NA,NA,NA,NA,NA,NA,"stop","T3G D90M F99M N107C S129* P169G",6
"lib2","SARS-CoV-2","ACGAAATATTTGATTG",2,15.05,10.75,-0.09,0.1,3,1.02,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","ACGAAATGCCATCTAT",10,219.71,9.32,-1.51,0.06,2.4,1.08,0,">1 nonsynonymous","Y121T K199E",2
"lib2","SARS-CoV-2","ACGAAATGCCTCGACA",4,55.83,10.81,-0.03,0.06,2.93,1.09,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","ACGAAATGGAAAAACT",2,21.54,9.91,-0.92,0.11,2.69,1.07,0,">1 nonsynonymous","N58S A89V",2
"lib2","SARS-CoV-2","ACGAAATGGTAATATA",8,38.08,6.76,-4.08,0.25,1.5,1.1,0.01,">1 nonsynonymous","T3N C61G G146L",3
"lib2","SARS-CoV-2","ACGAAATGTTGACAAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","S45T F99* E186I",3
"lib2","SARS-CoV-2","ACGAAATTAGTAAGAT",6,43.84,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A14S L95R",2
"lib2","SARS-CoV-2","ACGAAATTGATGCGCG",2,27.82,10.14,-0.7,0.08,2.38,1.03,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","ACGAAATTTGGATATC",3,29.83,9.86,-0.98,0.12,1.81,1.08,0.01,">1 nonsynonymous","P82M P197S T201L",3
"lib2","SARS-CoV-2","ACGAACAAAACCCCTA",1,17.49,10.57,-0.26,0.11,2.83,1.03,0.01,"1 nonsynonymous","F12M",1
"lib2","SARS-CoV-2","ACGAACAAAACTCTAA",4,141.99,10.85,0.01,0.05,2.84,1.13,0,"1 nonsynonymous","P197R",1
"lib2","SARS-CoV-2","ACGAACAAAGCATTGA",6,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","ACGAACAAGGATACTG",6,62.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P82A N118C I138A",3
"lib2","SARS-CoV-2","ACGAACAATTGGAACT",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R V103L R136D Q144T Y175I",5
"lib2","SARS-CoV-2","ACGAACACATTAAAGA",1,12.69,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","L38C T140H F167L V180H",4
"lib2","SARS-CoV-2","ACGAACACCAACTTTA",12,25.7,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","C49Y A81M",2
"lib2","SARS-CoV-2","ACGAACACCATTCCAA",4,30.63,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A67Y G86T D112R E135S",4
"lib2","SARS-CoV-2","ACGAACACGCCTCTTA",1,28.97,8.94,-1.9,0.11,2.4,1.1,0,">1 nonsynonymous","D98R I142N",2
"lib2","SARS-CoV-2","ACGAACACTCTAATAT",13,237.92,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N1E S45V N120T P161S Q176R",5
"lib2","SARS-CoV-2","ACGAACATAACACGTG",4,146.87,10.15,-0.68,0.05,2.64,1.02,0,">1 nonsynonymous","N30G R127S V173L",3
"lib2","SARS-CoV-2","ACGAACATAGTTGTCG",6,51.25,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y91M G101W R127E",3
"lib2","SARS-CoV-2","ACGAACATGAGATATT",4,29.22,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L5T A42R N64Y N118S F167H",5
"lib2","SARS-CoV-2","ACGAACATTCCTCGAA",7,56.44,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T55N P82E D90T N118M",4
"lib2","SARS-CoV-2","ACGAACCACGAATAAC",4,17.11,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N4L K48N P149I F167S",4
"lib2","SARS-CoV-2","ACGAACCAGGAGATTT",7,80.78,10.1,-0.74,0.05,2.89,1.07,0,">1 nonsynonymous","C31V D59Q",2
"lib2","SARS-CoV-2","ACGAACCATACTTCAT",3,28.84,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V11P G86T D98P F160N",4
"lib2","SARS-CoV-2","ACGAACCATGGCTAAG",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60N K128Y G155V V173P F185S",5
"lib2","SARS-CoV-2","ACGAACCCCAATTTAA",7,136.15,10.82,-0.02,0.04,2.94,1.05,0,">1 nonsynonymous","P54K L122D N130A",3
"lib2","SARS-CoV-2","ACGAACCCTACCTATA",4,56.63,10.12,-0.72,0.07,2.88,1,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","ACGAACCCTCCACCCT",9,90.23,6.32,-4.52,0.59,1.5,1.18,0.02,">1 nonsynonymous","V37L T55E V71D T201R",4
"lib2","SARS-CoV-2","ACGAACGACATAAAGT",7,57.58,10.84,0.01,0.05,3,1.03,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","ACGAACGCAAAATTAA",13,154.04,6,-4.84,1.01,1.5,1.18,0.01,">1 nonsynonymous","N4K Y21K S41C Y50Q K56S W106M Y121G",7
"lib2","SARS-CoV-2","ACGAACGCACAACGAC",1,20.61,10.32,-0.52,0.16,2.45,1.08,0.01,">1 nonsynonymous","D90N N107G",2
"lib2","SARS-CoV-2","ACGAACTAAAACCGAC",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8C R127S S147Q",3
"lib2","SARS-CoV-2","ACGAACTAAATCTACC",1,29.97,10.87,0.03,0.04,2.93,1.05,0,"1 nonsynonymous","N30G",1
"lib2","SARS-CoV-2","ACGAACTAGCCAGATA",2,51.03,10.76,-0.07,0.04,2.95,1.03,0,">1 nonsynonymous","S41H L60H",2
"lib2","SARS-CoV-2","ACGAACTAGCCGTATA",2,27.85,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91G N107S V153M P161D",4
"lib2","SARS-CoV-2","ACGAACTATATAGATA",8,1.2,NA,NA,NA,NA,NA,NA,"stop","N4* V153P",2
"lib2","SARS-CoV-2","ACGAACTTACTGTAAA",4,54.4,8.59,-2.25,0.12,1.89,1.07,0.01,">1 nonsynonymous","F8T G116F",2
"lib2","SARS-CoV-2","ACGAACTTCTAATAAG",22,196.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D98K D112R P177Y",3
"lib2","SARS-CoV-2","ACGAAGAAAAAACGCA",6,28.41,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5T S41L G86F",3
"lib2","SARS-CoV-2","ACGAAGAAAACCAAAT",3,2.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A67F",1
"lib2","SARS-CoV-2","ACGAAGAAAAGAAACA",10,3.84,NA,NA,NA,NA,NA,NA,"stop","I2F V37* A89F",3
"lib2","SARS-CoV-2","ACGAAGAAAATCATAC",5,92.71,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19P I88V Y119E N157S",4
"lib2","SARS-CoV-2","ACGAAGAAACCCATCG",1,0.77,NA,NA,NA,NA,NA,NA,"stop","A42M D90S Y119M E141* E154Y",5
"lib2","SARS-CoV-2","ACGAAGAAATACCAAT",10,75.25,8.75,-2.09,0.1,1.93,1.11,0,">1 nonsynonymous","A42D P82T G174L",3
"lib2","SARS-CoV-2","ACGAAGAACAAACTGA",8,2.93,NA,NA,NA,NA,NA,NA,"stop","L57S W106A D112* F160T",4
"lib2","SARS-CoV-2","ACGAAGAAGAAGAGAG",3,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S F134M",2
"lib2","SARS-CoV-2","ACGAAGACAAAACGCA",4,71.48,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D59L G74E G146V",3
"lib2","SARS-CoV-2","ACGAAGACACCACAGT",7,109.05,10.51,-0.32,0.03,2.84,1.13,0,">1 nonsynonymous","L5K I28F N40S D59F D98T",5
"lib2","SARS-CoV-2","ACGAAGACCTCCGTTA",10,60.42,10.26,-0.58,0.11,2.01,1.07,0.01,"1 nonsynonymous","P82A",1
"lib2","SARS-CoV-2","ACGAAGAGATGAGAAT",4,102.71,10.68,-0.16,0.03,2.94,1.07,0,">1 nonsynonymous","G9P T201R",2
"lib2","SARS-CoV-2","ACGAAGAGCAATGAGT",9,54.85,8.03,-2.81,0.24,1.5,1,0.03,">1 nonsynonymous","Y50I N107R",2
"lib2","SARS-CoV-2","ACGAAGAGTCCGTAAT",2,21.42,9.4,-1.43,0.26,2.28,1.05,0.03,">1 nonsynonymous","N151V G155L",2
"lib2","SARS-CoV-2","ACGAAGATATAATGTT",7,78.21,6.69,-4.15,0.46,1.5,1.21,0.02,">1 nonsynonymous","R16L S139Y G152C",3
"lib2","SARS-CoV-2","ACGAAGATTGATGATA",12,213.98,9.05,-1.78,0.08,2.36,1.05,0,">1 nonsynonymous","N4A A89Q L122S F156I",4
"lib2","SARS-CoV-2","ACGAAGATTGCTGATT",1,18.61,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","S36P F99T T201R",3
"lib2","SARS-CoV-2","ACGAAGCAAGAGTGGA",1,19.8,6.17,-4.66,0.7,1.5,1.16,0.01,">1 nonsynonymous","C61P K94V N118G Y123V",4
"lib2","SARS-CoV-2","ACGAAGCACAAGGCCA",3,1.05,NA,NA,NA,NA,NA,NA,"stop","P54R C61* F167L",3
"lib2","SARS-CoV-2","ACGAAGCACCTAAATT",7,22.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16K K87H I104E",3
"lib2","SARS-CoV-2","ACGAAGCAGAGGTATA",3,127.17,8.84,-2,0.05,2.95,1.07,0,"1 nonsynonymous","T170V",1
"lib2","SARS-CoV-2","ACGAAGCCTATTAGAA",1,13.98,10.5,-0.34,0.08,2.85,1.09,0,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","ACGAAGCTAAACTAAA",7,44.67,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A105S R136E Y159S",3
"lib2","SARS-CoV-2","ACGAAGGAACCACAAT",13,200.65,10.44,-0.4,0.03,2.89,1.06,0,"1 nonsynonymous","F44P",1
"lib2","SARS-CoV-2","ACGAAGGCATGATTGA",3,68.89,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V52P F167M",2
"lib2","SARS-CoV-2","ACGAAGGGCTAATACA",1,16.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88S P96C A105T N110M",4
"lib2","SARS-CoV-2","ACGAAGTAAAAATGCG",1,0.75,NA,NA,NA,NA,NA,NA,"stop","G51K L122* I142S",3
"lib2","SARS-CoV-2","ACGAAGTCAAAACAAG",1,34.73,10.29,-0.55,0.06,2.68,1.14,0,">1 nonsynonymous","L5A R127S",2
"lib2","SARS-CoV-2","ACGAAGTGAAGTATAA",16,211.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N Q163A",2
"lib2","SARS-CoV-2","ACGAAGTTAACAACCG",7,49.95,7.76,-3.08,0.23,1.5,1.11,0.02,">1 nonsynonymous","L38A N109K E135S T170E S200R",5
"lib2","SARS-CoV-2","ACGAAGTTACCAAATC",5,56.71,10.83,0,0.05,2.96,1.06,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","ACGAAGTTATAGATAT",2,98.16,9.76,-1.08,0.07,2.5,1.03,0,">1 nonsynonymous","C61G Y178L",2
"lib2","SARS-CoV-2","ACGAATAAACCTAATG",3,46.47,10.25,-0.58,0.03,2.99,1.04,0,">1 nonsynonymous","R27I G155N",2
"lib2","SARS-CoV-2","ACGAATAAATACTACA",5,0.37,NA,NA,NA,NA,NA,NA,"stop","C6S A22Y I88* D112Y P197L",5
"lib2","SARS-CoV-2","ACGAATAAGCGATTTG",2,17.35,10.93,0.09,0.08,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAATACAATAGTCA",6,119.01,10.31,-0.52,0.06,2.72,1.06,0,">1 nonsynonymous","D90S T100E",2
"lib2","SARS-CoV-2","ACGAATAGATAATCTG",2,17.19,6.56,-4.27,0.27,1.52,1.13,0.02,">1 nonsynonymous","C102Q F126M G152V",3
"lib2","SARS-CoV-2","ACGAATAGCTGACCAT",10,172.19,10.07,-0.77,0.08,2.58,1.07,0,">1 nonsynonymous","S53D Y66M V77L W106T",4
"lib2","SARS-CoV-2","ACGAATATATTCCTCT",12,117.82,8.74,-2.1,0.05,2.65,1.11,0,">1 nonsynonymous","D34Y Y123K F156E A190V T201R",5
"lib2","SARS-CoV-2","ACGAATATGTATGCCG",3,17.95,10.54,-0.29,0.15,2.84,1.17,0.01,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","ACGAATATTAGATATG",1,51.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27Q A42M C158P T201I",4
"lib2","SARS-CoV-2","ACGAATATTTCCGTCA",1,13.63,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","G83V S113E",2
"lib2","SARS-CoV-2","ACGAATCCATAATCAT",10,57.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","P96Y N107Y Y165V",3
"lib2","SARS-CoV-2","ACGAATCTACTCTCAA",11,138.38,10.61,-0.22,0.04,2.93,1.07,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","ACGAATCTATTTCCTA",2,155.01,10.82,-0.02,0.07,2.79,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAATCTTTCTTATA",7,45.73,6,-4.84,2,1.83,1.13,0,">1 nonsynonymous","P96Q G146K Y159R",3
"lib2","SARS-CoV-2","ACGAATGAAAATTAAA",1,9.57,10.59,-0.24,0.12,2.79,1.23,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGAATGAACATCTGA",3,59.95,10.29,-0.55,0.06,2.95,1.01,0,">1 nonsynonymous","V37H K87G",2
"lib2","SARS-CoV-2","ACGAATGACCGGTCTA",4,22.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F8I K87Y D98L R127L F185S",5
"lib2","SARS-CoV-2","ACGAATGCCGACTAGT",1,15.9,6.38,-4.46,0.34,2.58,1.11,0.01,">1 nonsynonymous","T3W T46I C61M I138C Y159M",5
"lib2","SARS-CoV-2","ACGAATGCCGTAGGAC",9,107.88,10.43,-0.4,0.04,2.95,1.02,0,">1 nonsynonymous","I2N N58S G116R",3
"lib2","SARS-CoV-2","ACGAATGCGATATGCA",3,69.09,10.75,-0.08,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAATGCTGTATTAA",3,10.34,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G9T K56F N157P",3
"lib2","SARS-CoV-2","ACGAATGGAACCGGAC",7,87.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9K D90G Y121L C150N F185I",5
"lib2","SARS-CoV-2","ACGAATGGGCCAAAAT",3,38.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5K Y50S N118K G155K",4
"lib2","SARS-CoV-2","ACGAATGGTTTAGATA",2,61.29,10.9,0.06,0.05,2.89,1.12,0,">1 nonsynonymous","T55D D97G P197K",3
"lib2","SARS-CoV-2","ACGAATGTACACGGGT",6,111.68,10.64,-0.19,0.03,2.97,1.03,0,">1 nonsynonymous","L60V D98T",2
"lib2","SARS-CoV-2","ACGAATGTCTGCTCTA",2,18.03,8.55,-2.28,0.21,1.61,1.16,0.02,">1 nonsynonymous","F12P P191T P197V",3
"lib2","SARS-CoV-2","ACGAATGTGGGGCCTA",11,82.98,10.14,-0.7,0.1,2.35,1.1,0,">1 nonsynonymous","N4M F47R N171M",3
"lib2","SARS-CoV-2","ACGAATTCCGCCGGCT",6,76.39,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37K F44L D90K D97S V103D",5
"lib2","SARS-CoV-2","ACGAATTGCTTCGTTC",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F G116E N130V",3
"lib2","SARS-CoV-2","ACGAATTGGACACCTT",3,8.56,NA,NA,NA,NA,NA,NA,"stop","P96* I104*",2
"lib2","SARS-CoV-2","ACGAATTGTTTCTAGG",4,0.68,NA,NA,NA,NA,NA,NA,"stop","S19G A33G G74A T85M V115K R136D I142*",7
"lib2","SARS-CoV-2","ACGAATTTTAAACCAT",2,55.81,9.22,-1.62,0.06,2.82,1.11,0,">1 nonsynonymous","S41Y Y119P",2
"lib2","SARS-CoV-2","ACGAATTTTGAATACC",5,82.2,10.12,-0.72,0.05,2.43,1.07,0,"1 nonsynonymous","L131T",1
"lib2","SARS-CoV-2","ACGACAAAAGAGAATT",6,81.07,9.45,-1.38,0.06,2.29,1.04,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","ACGACAAACGCACGAG",7,107.99,10.16,-0.67,0.05,2.64,1.03,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","ACGACAAAGACTGCAT",5,20.89,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S29L V71P",2
"lib2","SARS-CoV-2","ACGACAAAGAGACCTT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","S129* V182F",2
"lib2","SARS-CoV-2","ACGACAAATGCAAGAT",5,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S G116E R179M P191S",4
"lib2","SARS-CoV-2","ACGACAACACAAACCT",1,14.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6P Y35L D90E L95Q",4
"lib2","SARS-CoV-2","ACGACAACATCTCCAT",7,82.26,9.75,-1.08,0.09,2.05,1.06,0,">1 nonsynonymous","V77R T85G L122F",3
"lib2","SARS-CoV-2","ACGACAACCACTAGCA",15,0.78,NA,NA,NA,NA,NA,NA,"stop","P7* N58R C150I T201R",4
"lib2","SARS-CoV-2","ACGACAACTCGTTTAT",14,73.74,9.15,-1.69,0.18,1.6,1.1,0.01,">1 nonsynonymous","F44R N120I L183V",3
"lib2","SARS-CoV-2","ACGACAAGACCAAAAG",2,12.53,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P82Q G86Q E141M P161G",4
"lib2","SARS-CoV-2","ACGACAAGGCACAATA",4,15.46,6.47,-4.36,0.47,2.14,1.09,0.06,">1 nonsynonymous","I2K Y91I V103D Y165Q",4
"lib2","SARS-CoV-2","ACGACAAGGTGATACG",3,41.34,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K48R P96Y P149L A192E",4
"lib2","SARS-CoV-2","ACGACAATCCTTTCCA",2,12.6,9.13,-1.7,0.08,2.84,1.07,0,"1 nonsynonymous","N107H",1
"lib2","SARS-CoV-2","ACGACAATCGCTGGAA",12,48.37,9.23,-1.6,0.03,2.97,1.07,0,">1 nonsynonymous","Y119H L125M",2
"lib2","SARS-CoV-2","ACGACACAAATTCGTG",2,33.96,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11S F44M Y50V G83R",4
"lib2","SARS-CoV-2","ACGACACAAGAGATCT",3,79.58,10.49,-0.34,0.05,2.88,1.1,0,">1 nonsynonymous","D59R N64M",2
"lib2","SARS-CoV-2","ACGACACAGATTACGC",7,41.14,8.4,-2.44,0.32,1.5,1.04,0.05,">1 nonsynonymous","C49L G116W",2
"lib2","SARS-CoV-2","ACGACACATTGACAAC",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K L60V D97I F126E Y175I T201Q",6
"lib2","SARS-CoV-2","ACGACACCAGAGTACC",1,8.03,8.47,-2.36,0.27,1.57,1.08,0.04,">1 nonsynonymous","A81L S139H",2
"lib2","SARS-CoV-2","ACGACACGTAGTGCCA",7,57.44,10.82,-0.01,0.07,2.85,1.16,0,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","ACGACACTATTATCCG",5,0,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib2","SARS-CoV-2","ACGACACTGGATAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","A81* K198V",2
"lib2","SARS-CoV-2","ACGACACTTTTCATAC",5,22.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S N40A W106R G146S",4
"lib2","SARS-CoV-2","ACGACAGAACTAGAAT",4,14.38,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","L60D G83F A89R G116L",4
"lib2","SARS-CoV-2","ACGACAGAATTTGCGA",3,55.68,9.5,-1.34,0.06,2.86,1.14,0,">1 nonsynonymous","R16M L125H V153G",3
"lib2","SARS-CoV-2","ACGACAGACATTTAGA",1,34.19,6.52,-4.31,0.54,1.5,1.04,0.03,">1 nonsynonymous","L38K N118L Y143G",3
"lib2","SARS-CoV-2","ACGACAGAGTGTAACT",3,64.66,10.79,-0.05,0.03,2.96,1.06,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","ACGACAGGAAAGTGTT",1,15.47,6,-4.84,2,1.5,1.16,0.03,"1 nonsynonymous","R124Q",1
"lib2","SARS-CoV-2","ACGACAGGTATAACCT",3,0,NA,NA,NA,NA,NA,NA,"stop","T100G R136* P149D",3
"lib2","SARS-CoV-2","ACGACAGTAGGGAGAA",2,18.15,10.6,-0.23,0.4,2.12,1.13,0.07,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","ACGACAGTCACATTTA",5,67.54,9.44,-1.39,0.08,1.85,1.09,0,"1 nonsynonymous","D68T",1
"lib2","SARS-CoV-2","ACGACATATTCACCTA",10,119.6,10.85,0.01,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGACATCGGCAATAA",4,65.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F62G A81C S129R P149C Q176I",5
"lib2","SARS-CoV-2","ACGACATCGGTATGTG",2,22.69,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","I2S F8V C150G V153P",4
"lib2","SARS-CoV-2","ACGACATCTCTCGCAA",9,14.19,NA,NA,NA,NA,NA,NA,"stop","N1D F12* Y21H",3
"lib2","SARS-CoV-2","ACGACATCTTTTCCAT",4,159.01,10.69,-0.14,0.04,2.97,1.04,0,">1 nonsynonymous","L5C K56R",2
"lib2","SARS-CoV-2","ACGACATGCAATCGAA",9,57.65,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V20E N58P P82E F99L D137Y",5
"lib2","SARS-CoV-2","ACGACATTAAGCCATT",2,26.21,8.69,-2.15,0.16,1.66,1.12,0.02,">1 nonsynonymous","L5G A67T E135S",3
"lib2","SARS-CoV-2","ACGACATTACTCCCTA",3,56.58,10.21,-0.62,0.05,2.8,1,0,">1 nonsynonymous","E10T T46H L60K C195W",4
"lib2","SARS-CoV-2","ACGACCAAAAAATCTT",6,94.4,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A22Q F70N Y119N F156T",4
"lib2","SARS-CoV-2","ACGACCAAAGGTATAA",5,191.16,10.84,0.01,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGACCAAATTACGAC",1,9.05,10.95,0.11,0.11,3,1.05,0,">1 nonsynonymous","V37H T55P",2
"lib2","SARS-CoV-2","ACGACCAAGCACGCAC",1,14.74,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A18L G83V N107I",3
"lib2","SARS-CoV-2","ACGACCAAGGGCTGGT",8,80.88,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9L G51A L60S F99L K199P",5
"lib2","SARS-CoV-2","ACGACCAATTCTGCTT",3,8.03,6,-4.84,1.68,3,1.22,0.02,">1 nonsynonymous","A14C C61Y I80M A105Y Q168S",5
"lib2","SARS-CoV-2","ACGACCACACGCATAA",2,26.28,8.51,-2.33,0.13,3,1.12,0.01,">1 nonsynonymous","V77L N118P A192T",3
"lib2","SARS-CoV-2","ACGACCACTATCAGGG",17,3.02,NA,NA,NA,NA,NA,NA,"stop","C6V S19* C49V C61L G166L",5
"lib2","SARS-CoV-2","ACGACCATACCAAGGC",3,82.74,6.28,-4.56,0.38,1.5,1.13,0.01,">1 nonsynonymous","N4S G166L Y178R",3
"lib2","SARS-CoV-2","ACGACCATTACACCGT",3,12.15,7.13,-3.7,0.51,1.93,1.17,0.07,">1 nonsynonymous","R25A G101R",2
"lib2","SARS-CoV-2","ACGACCATTACACTGT",5,59.94,10.38,-0.46,0.08,2.72,1,0,">1 nonsynonymous","F8I T85L Q163M",3
"lib2","SARS-CoV-2","ACGACCATTTAAAATT",9,119.72,8.31,-2.53,0.17,1.5,1.11,0.01,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","ACGACCCAGACACAGT",6,74.37,10.5,-0.33,0.05,2.85,1.11,0,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","ACGACCCAGAGTTATT",12,1.36,NA,NA,NA,NA,NA,NA,"stop","F8* Y178F",2
"lib2","SARS-CoV-2","ACGACCCAGCTTACAA",9,136.23,8.32,-2.52,0.28,1.5,1.02,0.04,">1 nonsynonymous","C61E D90I V173S",3
"lib2","SARS-CoV-2","ACGACCCATAGATTAA",8,2.3,NA,NA,NA,NA,NA,NA,"stop","L5V W23V K87G P96*",4
"lib2","SARS-CoV-2","ACGACCCATTATCTTT",5,51.16,10.91,0.07,0.09,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGACCCCTGACAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* K56G V77L Q79E E135L T201R",6
"lib2","SARS-CoV-2","ACGACCGAAACCTTTT",11,140.19,10.73,-0.1,0.05,2.91,1.06,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","ACGACCGAAGTGGTAA",9,134.76,10.65,-0.18,0.03,2.95,1.04,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","ACGACCGATGAACTAT",10,134.3,10.8,-0.03,0.05,2.88,1.13,0,"1 nonsynonymous","K114T",1
"lib2","SARS-CoV-2","ACGACCTAAGTTATAT",12,257.34,10.4,-0.44,0.04,2.89,1.07,0,">1 nonsynonymous","V37N L57K L122S",3
"lib2","SARS-CoV-2","ACGACCTATGGGCCGA",1,18.76,8.99,-1.84,0.13,2.85,1.12,0.01,">1 nonsynonymous","S43L I142W G174D",3
"lib2","SARS-CoV-2","ACGACCTGCTCTACAA",4,82.02,7.1,-3.74,0.19,1.5,1.06,0.01,">1 nonsynonymous","Y50T N120D T170L",3
"lib2","SARS-CoV-2","ACGACCTTAAGGAGGG",13,127.37,10.78,-0.06,0.06,2.87,1.14,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","ACGACGAAAATCCGCT",7,86.71,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S36F C49N S69W G83R",4
"lib2","SARS-CoV-2","ACGACGAACTATCAGC",3,78.01,10.87,0.04,0.08,2.97,1.05,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","ACGACGAAGGGCTACT",3,24.74,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K87M L95C T100P Y121D T148M",5
"lib2","SARS-CoV-2","ACGACGAATCCAGTAA",2,8.56,8.89,-1.95,0.35,1.91,1.07,0.06,">1 nonsynonymous","S45F Y91A",2
"lib2","SARS-CoV-2","ACGACGAATGAAGTCG",4,57.1,10.04,-0.79,0.07,2.74,1.04,0,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","ACGACGAATTACAATT",2,9.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q S113D P149S E154Y G166M",5
"lib2","SARS-CoV-2","ACGACGACTTTCAGGT",12,171.07,9.14,-1.69,0.06,2.02,1.11,0,">1 nonsynonymous","V37N K87W D98L L131V",4
"lib2","SARS-CoV-2","ACGACGCATTTATTAG",8,71.96,10.11,-0.73,0.05,2.83,1.05,0,">1 nonsynonymous","T15L R136H P197A",3
"lib2","SARS-CoV-2","ACGACGCTCTCTAGAA",1,13.83,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","K87V P96S D112N Y119M",4
"lib2","SARS-CoV-2","ACGACGCTCTTCCTTT",6,43.73,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V20L C61A D112M",3
"lib2","SARS-CoV-2","ACGACGGGCGGACTAC",8,103.91,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4F Y123S N157S G166I",4
"lib2","SARS-CoV-2","ACGACGGGGCTTGAGC",3,29.7,10.42,-0.42,0.05,2.95,1,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","ACGACGGTGTAAGACA",1,14.2,9.14,-1.69,0.09,2.98,1,0,">1 nonsynonymous","Q84S S113T F160M",3
"lib2","SARS-CoV-2","ACGACGTAATACTCAT",5,43.17,10.68,-0.16,0.08,2.91,1.02,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","ACGACGTGTTTAATAA",4,0.2,NA,NA,NA,NA,NA,NA,"stop","W23N S36M C49Y T55K G101*",5
"lib2","SARS-CoV-2","ACGACGTTCACTCATG",5,56.81,8.39,-2.44,0.14,2.97,1.07,0.01,"1 nonsynonymous","F126S",1
"lib2","SARS-CoV-2","ACGACTAAGTTAGAAG",9,71.49,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F17P N92T S164H",3
"lib2","SARS-CoV-2","ACGACTAGTGCTCTCT",1,16.73,6.56,-4.28,0.58,1.5,1.09,0.03,">1 nonsynonymous","N58F A67I Y91P",3
"lib2","SARS-CoV-2","ACGACTATATAACACG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","ACGACTATCCCGACGG",7,102.04,10.85,0.01,0.04,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGACTATGACATGTG",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130P N157A",2
"lib2","SARS-CoV-2","ACGACTATGAGATCCT",3,53.39,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F12H F62E L95P",3
"lib2","SARS-CoV-2","ACGACTCAACAAACTG",8,70.53,10.6,-0.23,0.02,2.92,1.09,0,">1 nonsynonymous","T3Y Q84S P149S",3
"lib2","SARS-CoV-2","ACGACTCAACCACAGC",8,142.27,9.84,-1,0.07,2.24,1.04,0,">1 nonsynonymous","I2T I28G F160C",3
"lib2","SARS-CoV-2","ACGACTCAATTCCACC",4,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S Y175G",2
"lib2","SARS-CoV-2","ACGACTCACCCGGGAT",1,6.33,10.57,-0.26,0.09,2.99,1,0,"1 nonsynonymous","D98M",1
"lib2","SARS-CoV-2","ACGACTCCACACCGCC",1,33.73,8.22,-2.62,0.16,2.59,1.08,0.01,">1 nonsynonymous","V37M Y143R",2
"lib2","SARS-CoV-2","ACGACTCGTTTCTGTG",7,94.78,10.42,-0.41,0.05,2.73,1.22,0,">1 nonsynonymous","C61L D90S",2
"lib2","SARS-CoV-2","ACGACTCTCTGCAGTA",9,254.59,9.02,-1.81,0.05,1.77,1.07,0,">1 nonsynonymous","V37I P82T Y175F",3
"lib2","SARS-CoV-2","ACGACTCTTACGGGTG",1,11.56,10.2,-0.64,0.09,2.82,1.16,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","ACGACTCTTATCCACT",9,5.08,NA,NA,NA,NA,NA,NA,"stop","F44D N109* L122W",3
"lib2","SARS-CoV-2","ACGACTGATATTTTTA",2,66.32,10.7,-0.14,0.03,2.96,1.05,0,">1 nonsynonymous","E141H P149L K199G",3
"lib2","SARS-CoV-2","ACGACTGCAAACGCTT",3,33.63,10.33,-0.51,0.05,2.92,1.08,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","ACGACTGCGGCTCGAG",1,16.23,9.82,-1.01,0.15,2.36,1.05,0.01,">1 nonsynonymous","F44K G116I K198Y",3
"lib2","SARS-CoV-2","ACGACTGCTATGAGTG",22,123.54,8.72,-2.12,0.09,1.65,1.1,0,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","ACGACTTATAGTAAGG",6,75.88,8.96,-1.88,0.17,1.55,1.06,0.01,">1 nonsynonymous","N4K A89F P149S F160A",4
"lib2","SARS-CoV-2","ACGACTTCAAAGAAAC",9,93.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K26P Y39T I142K",3
"lib2","SARS-CoV-2","ACGAGAAAAAGTTTAC",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S N64R A81V N92I",4
"lib2","SARS-CoV-2","ACGAGAAAAATGCATA",1,8.23,10.92,0.08,0.09,2.93,1.05,0,"1 nonsynonymous","S43H",1
"lib2","SARS-CoV-2","ACGAGAAAATGCGCGA",1,26.75,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6Y Y50E Y91A I142M",4
"lib2","SARS-CoV-2","ACGAGAAACAAGAAGG",3,58.53,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","C102Y T140V E186A",3
"lib2","SARS-CoV-2","ACGAGAAACCATCTCC",2,9.37,6.42,-4.41,1.68,1.5,1.11,0.03,">1 nonsynonymous","K26P D112P E186F",3
"lib2","SARS-CoV-2","ACGAGAAACGAGTGGC",6,14.29,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T85M F99D N151P",3
"lib2","SARS-CoV-2","ACGAGAACGCCTTACA",2,1.84,NA,NA,NA,NA,NA,NA,"stop","C61L L162*",2
"lib2","SARS-CoV-2","ACGAGAACGTAAATTG",14,67.38,9.35,-1.48,0.09,1.5,1.11,0,">1 nonsynonymous","C49L I104V",2
"lib2","SARS-CoV-2","ACGAGAACTTGCAATC",1,49.87,10.8,-0.04,0.05,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAGAAGATTTAAAA",4,13.75,8.38,-2.46,0.27,1.69,1.12,0.04,">1 nonsynonymous","C6K D98L",2
"lib2","SARS-CoV-2","ACGAGAAGCTAGGGTC",2,2.62,NA,NA,NA,NA,NA,NA,"stop","P7T F44I G83A Y93G E141* S147*",6
"lib2","SARS-CoV-2","ACGAGAAGGGATAGGA",7,64.28,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A105M G116H R124K G146A",4
"lib2","SARS-CoV-2","ACGAGAAGTACGCGGT",1,37.13,10.16,-0.68,0.06,2.87,1.14,0,">1 nonsynonymous","F12W L122S",2
"lib2","SARS-CoV-2","ACGAGAATAAGAAAAG",1,14.21,7.59,-3.25,0.27,1.5,1.08,0.03,">1 nonsynonymous","S45T L60C A89Q",3
"lib2","SARS-CoV-2","ACGAGAATCAATATCT",2,6.52,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","Y66F A105D G116S Y121R",4
"lib2","SARS-CoV-2","ACGAGAATCTCACGGA",1,10.34,10.61,-0.22,0.08,2.98,1,0,"1 nonsynonymous","S36Y",1
"lib2","SARS-CoV-2","ACGAGAATGACTAGTT",9,16.34,NA,NA,NA,NA,NA,NA,"stop","S113* S139R S147F K199L",4
"lib2","SARS-CoV-2","ACGAGAATGGCTAAAT",2,26.32,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","I2M R16D F99S T140Y A145S",5
"lib2","SARS-CoV-2","ACGAGAATTGAATAAT",5,0.03,NA,NA,NA,NA,NA,NA,"stop","Y35* K56I G83F L122I G174W",5
"lib2","SARS-CoV-2","ACGAGACAACAGAAGG",12,114.11,9.02,-1.82,0.08,1.94,1.08,0,">1 nonsynonymous","Y91S P169R",2
"lib2","SARS-CoV-2","ACGAGACGTTACTTAT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69N R136D P197R",3
"lib2","SARS-CoV-2","ACGAGAGGCTGTTACA",2,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18M I88Y G172R",3
"lib2","SARS-CoV-2","ACGAGAGGGCCATATA",6,64.52,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N107H R124C T170K",3
"lib2","SARS-CoV-2","ACGAGAGTACTCTAAA",3,84.89,10.4,-0.44,0.05,2.84,1.13,0,">1 nonsynonymous","L57I N110V",2
"lib2","SARS-CoV-2","ACGAGATAAATATCCA",5,9.71,10.45,-0.38,0.07,2.86,1.16,0,">1 nonsynonymous","P7Q V173H",2
"lib2","SARS-CoV-2","ACGAGATCGAGAACCT",9,177.61,10.05,-0.78,0.08,2.48,1.08,0,">1 nonsynonymous","P82V T100M",2
"lib2","SARS-CoV-2","ACGAGATCTAATACCT",8,0.69,NA,NA,NA,NA,NA,NA,"stop","D112* L131Y C158F",3
"lib2","SARS-CoV-2","ACGAGATCTGGCAGTG",5,96.85,10.75,-0.09,0.05,2.89,1.14,0,">1 nonsynonymous","A22H S200I",2
"lib2","SARS-CoV-2","ACGAGATTACAAGCCA",9,134.12,10.83,-0.01,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGAGATTCTGCATAG",6,135.68,10.27,-0.57,0.07,2.62,1.05,0,"1 nonsynonymous","P133W",1
"lib2","SARS-CoV-2","ACGAGCAAACTATCAA",10,5.37,NA,NA,NA,NA,NA,NA,"stop","F12G S29G G101V D112* F134Y",5
"lib2","SARS-CoV-2","ACGAGCAATAAAAAAA",6,71.86,9.26,-1.58,0.09,2.31,1.09,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","ACGAGCACCAAACTGC",5,52.11,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6S N64S C150M G174R",4
"lib2","SARS-CoV-2","ACGAGCAGATTCAACT",2,27.66,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","S43F K56H A81D K114S Q144G G174I",6
"lib2","SARS-CoV-2","ACGAGCAGTTACCTGT",6,89.35,10.86,0.03,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAGCATATGCACAA",1,26.17,10.53,-0.31,0.08,3,1.02,0,"1 nonsynonymous","F156A",1
"lib2","SARS-CoV-2","ACGAGCATTTTGGGAT",13,90.32,10.44,-0.39,0.05,2.81,1.12,0,">1 nonsynonymous","A33I V77L",2
"lib2","SARS-CoV-2","ACGAGCCATAACTGCA",3,18.37,9.84,-1,0.13,2.08,1,0.01,">1 nonsynonymous","D34L S184L",2
"lib2","SARS-CoV-2","ACGAGCCGCCAGATAT",1,21.6,9.7,-1.14,0.12,1.99,1.03,0,">1 nonsynonymous","V11W S41Q A89C Q163Y",4
"lib2","SARS-CoV-2","ACGAGCCGGAATTAAT",7,37.07,9.11,-1.72,0.07,2.97,1.03,0,">1 nonsynonymous","D97A I142Q F156L",3
"lib2","SARS-CoV-2","ACGAGCGCCCTTTCGA",5,130.57,10.94,0.11,0.05,2.94,1.07,0,">1 nonsynonymous","N4K Y123K",2
"lib2","SARS-CoV-2","ACGAGCGCGTTTTCAC",2,37.4,10.7,-0.14,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGAGCGTTGAACCCG",1,27.59,9.32,-1.52,0.2,1.58,1.06,0.02,">1 nonsynonymous","L38P F44S",2
"lib2","SARS-CoV-2","ACGAGCTACCTTCATA",3,15.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82M S139R Y178W L183Q",4
"lib2","SARS-CoV-2","ACGAGCTCTTACCGAT",5,23.03,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T3G L60P G86Y D97Y F167Y A192F",6
"lib2","SARS-CoV-2","ACGAGCTGAGACACCT",25,418.91,9.69,-1.15,0.05,2.59,1.07,0,">1 nonsynonymous","V11Y C61V K128R E141V",4
"lib2","SARS-CoV-2","ACGAGCTTCACACCAA",2,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92Y K114F",2
"lib2","SARS-CoV-2","ACGAGCTTTACATACC",3,26.01,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","L38M L95R",2
"lib2","SARS-CoV-2","ACGAGGAACACACACA",3,50.4,9.94,-0.9,0.07,2.77,1.02,0,">1 nonsynonymous","T3K Y35T N120V S139T",4
"lib2","SARS-CoV-2","ACGAGGAACGAGCCAA",16,68.78,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F99R N118F G174R",3
"lib2","SARS-CoV-2","ACGAGGAATAATGACG",3,47.68,8.77,-2.06,0.13,2.54,1.02,0.01,">1 nonsynonymous","S41Y K56E Q176T",3
"lib2","SARS-CoV-2","ACGAGGACAGTACATC",4,24.45,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C61P G101L I138Q N157V",4
"lib2","SARS-CoV-2","ACGAGGAGATTACGCC",2,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R A105T L122Y E141W",4
"lib2","SARS-CoV-2","ACGAGGAGCACCCCTT",3,19.11,10.84,0,0.38,1.77,1,0.05,">1 nonsynonymous","V11D F44P S113D N120F P169S",5
"lib2","SARS-CoV-2","ACGAGGAGGATACACA",1,20.85,10.58,-0.26,0.08,2.97,1.06,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","ACGAGGATTGATAGAC",10,32.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A22D V77N S113V",3
"lib2","SARS-CoV-2","ACGAGGCAACCGACTA",7,41.65,9.23,-1.61,0.13,1.82,1,0.01,">1 nonsynonymous","A42V N58K D90N W106R",4
"lib2","SARS-CoV-2","ACGAGGCACTAATAAA",15,175.28,10.58,-0.26,0.03,2.91,1.07,0,">1 nonsynonymous","I28F D98Y I138Y",3
"lib2","SARS-CoV-2","ACGAGGCGCCTGGCAC",15,97.46,6,-4.84,1.84,1.5,1.2,0.01,">1 nonsynonymous","G51N D98S D137I Q168N",4
"lib2","SARS-CoV-2","ACGAGGCTATAAGACA",2,0.58,NA,NA,NA,NA,NA,NA,"stop","L5* F17T P82M G146L",4
"lib2","SARS-CoV-2","ACGAGGGAATCCTAGA",1,16.56,6,-4.84,2,3,1.06,0,">1 nonsynonymous","Y91A N157K",2
"lib2","SARS-CoV-2","ACGAGGGAATTTCTTA",7,21.97,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N4P E10D C102W N118Y Y123S R136N V173A",7
"lib2","SARS-CoV-2","ACGAGGGCAAAAATCA",10,39.11,6.42,-4.41,0.5,1.5,1.17,0.02,"1 nonsynonymous","I88Y",1
"lib2","SARS-CoV-2","ACGAGGGCAAGCTTAA",5,47.33,10.79,-0.04,0.03,2.99,1.03,0,">1 nonsynonymous","A14S V37L",2
"lib2","SARS-CoV-2","ACGAGGGCTTAACCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E V181F",2
"lib2","SARS-CoV-2","ACGAGGGTACTTCGAA",4,75.07,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A22S Y39G V103L Q176S",4
"lib2","SARS-CoV-2","ACGAGGTTCCCGAGAC",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T D90L W106S T140E G174V",5
"lib2","SARS-CoV-2","ACGAGTAAACAATTTG",7,147.14,10.27,-0.57,0.04,2.84,1.02,0,">1 nonsynonymous","D90G T201V",2
"lib2","SARS-CoV-2","ACGAGTAAAGGCGGAC",20,501.97,8.74,-2.09,0.06,3,1.08,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","ACGAGTAAGGTTCTCC",5,68.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9S W23N L95M Y123K I142L",5
"lib2","SARS-CoV-2","ACGAGTAATATAATAG",10,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T G86L D90T V103A G152N",5
"lib2","SARS-CoV-2","ACGAGTACGACAGTGT",1,5.55,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5M F12K N107I D137N",4
"lib2","SARS-CoV-2","ACGAGTACTCTACGAC",9,41.31,9.37,-1.47,0.14,1.95,1.11,0.01,">1 nonsynonymous","C61E W106E",2
"lib2","SARS-CoV-2","ACGAGTAGTGTCTATA",1,44.43,9.83,-1.01,0.1,2.22,1,0.01,">1 nonsynonymous","I28S L95I N120R S139T P197K",5
"lib2","SARS-CoV-2","ACGAGTATCCACTATG",9,20.23,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V77T I104T L162K",3
"lib2","SARS-CoV-2","ACGAGTCCTAAAGCAT",10,94.06,10.83,0,0.05,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGAGTCGACAACCAC",2,16.3,8.68,-2.16,0.16,2.21,1.08,0.01,">1 nonsynonymous","K56L N107T",2
"lib2","SARS-CoV-2","ACGAGTCTGGCTAACA",5,47.03,10.77,-0.07,0.07,2.96,1.04,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","ACGAGTGAGGCACGCA",8,64.71,8.26,-2.58,0.24,1.54,1.07,0.02,">1 nonsynonymous","P133I G146R",2
"lib2","SARS-CoV-2","ACGAGTGCGTTGCCTG",4,66.6,6.36,-4.48,0.35,1.5,1.11,0.01,">1 nonsynonymous","N1G V65S L95W C102I G152H L162P Y175N",7
"lib2","SARS-CoV-2","ACGAGTGTACAGATAA",9,140.74,10.23,-0.61,0.05,2.76,1.08,0,">1 nonsynonymous","D90H Q144A",2
"lib2","SARS-CoV-2","ACGAGTTAGGTTCCTT",3,0.18,NA,NA,NA,NA,NA,NA,"stop","V37F G74*",2
"lib2","SARS-CoV-2","ACGAGTTCGAACTGGC",2,45.14,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","S41P G86A T100E A105M",4
"lib2","SARS-CoV-2","ACGAGTTCTCAAGCTA",3,13.37,10.77,-0.07,0.06,2.98,1.02,0,">1 nonsynonymous","L60M Q144M",2
"lib2","SARS-CoV-2","ACGAGTTGAATGACAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77T",1
"lib2","SARS-CoV-2","ACGAGTTGACGAGATG",1,19.12,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V103E C150H",2
"lib2","SARS-CoV-2","ACGAGTTGGTCGATTT",5,77.17,10.08,-0.75,0.09,2.62,1.02,0,">1 nonsynonymous","N1Q S45L",2
"lib2","SARS-CoV-2","ACGAGTTGTCACTGAG",3,94.26,6.02,-4.81,0.88,1.5,1.24,0.01,">1 nonsynonymous","N13F S19V Y39M V115R",4
"lib2","SARS-CoV-2","ACGAGTTTAGACTAAG",9,2.15,NA,NA,NA,NA,NA,NA,"stop","Y35H S43F K56* T100G V115K F167S",6
"lib2","SARS-CoV-2","ACGATAAAAAATCTAT",6,31.08,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V103W T201Y",2
"lib2","SARS-CoV-2","ACGATAAAATTCAATA",8,91.7,9.4,-1.43,0.07,1.91,1.11,0,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","ACGATAAACATGGGAA",10,23.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13V D90N Y121S P133S Q144A",5
"lib2","SARS-CoV-2","ACGATAAACCCAGGCC",7,79.58,10.82,-0.02,0.04,2.94,1.06,0,">1 nonsynonymous","L95V S200M",2
"lib2","SARS-CoV-2","ACGATAAAGGTTGCTA",15,84.01,7.25,-3.58,0.33,1.5,1.04,0.03,">1 nonsynonymous","S19Y L60E V115M",3
"lib2","SARS-CoV-2","ACGATAAATCGAGTCT",9,76.75,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F12S D59L N110S Y121Q F156L Y165Q F185L",7
"lib2","SARS-CoV-2","ACGATAAATGGTATTT",2,37.76,10.53,-0.31,0.03,2.96,1.02,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","ACGATAACGTGCGTAC",4,2990.74,10.78,-0.05,0.04,2.97,1.05,0,">1 nonsynonymous","G9E N120K",2
"lib2","SARS-CoV-2","ACGATAAGATACGGAG",1,38.18,8.3,-2.53,0.08,2.79,1.07,0,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","ACGATAATGTAAATCT",7,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V N58R I80Y",3
"lib2","SARS-CoV-2","ACGATAATTATTGTGA",3,15.57,10.8,-0.04,0.07,3,1.04,0,"1 nonsynonymous","N171Q",1
"lib2","SARS-CoV-2","ACGATACAATTGGAGA",2,21.4,9.38,-1.46,0.11,1.54,1.06,0.01,">1 nonsynonymous","L38S S184K",2
"lib2","SARS-CoV-2","ACGATACACAGACTAA",8,54.97,8.9,-1.94,0.1,1.67,1.18,0,">1 nonsynonymous","N4S E154L V181A",3
"lib2","SARS-CoV-2","ACGATACATATCCGAA",4,89.2,8.67,-2.17,0.26,1.5,1,0.03,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","ACGATACCCCCTACCT",1,50.04,9.04,-1.8,0.05,2.95,1.04,0,">1 nonsynonymous","R27K G166L",2
"lib2","SARS-CoV-2","ACGATACCCCTGACAC",5,34.95,6,-4.84,2,3,1.09,0,">1 nonsynonymous","S29K L95W",2
"lib2","SARS-CoV-2","ACGATACCTGACGGGA",4,54.72,10.72,-0.12,0.05,2.87,1.11,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","ACGATACTAACGCCTA",8,51.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29V L38T S69E S113L S129K",5
"lib2","SARS-CoV-2","ACGATACTACTTGAGT",6,0.14,NA,NA,NA,NA,NA,NA,"stop","C6W C61* D68L",3
"lib2","SARS-CoV-2","ACGATACTAGATCCTT",6,134.57,10.85,0.01,0.05,2.91,1.1,0,">1 nonsynonymous","T3V V37M",2
"lib2","SARS-CoV-2","ACGATACTTAAATAAA",8,2.3,NA,NA,NA,NA,NA,NA,"stop","K48E D68Q G116*",3
"lib2","SARS-CoV-2","ACGATAGAACCCTGCC",14,133.57,10.7,-0.14,0.03,2.92,1.09,0,">1 nonsynonymous","S129I S200I",2
"lib2","SARS-CoV-2","ACGATAGACAAAGCCC",2,24.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W D34K A42K L95N W106M V115T",6
"lib2","SARS-CoV-2","ACGATAGACAAGACTT",4,68.01,7.52,-3.32,0.14,1.74,1.1,0,">1 nonsynonymous","Y39Q G146K T170R",3
"lib2","SARS-CoV-2","ACGATAGCAAAAGAGA",3,57.82,9.99,-0.85,0.07,3,1,0,">1 nonsynonymous","Y35C L125A",2
"lib2","SARS-CoV-2","ACGATAGCCTAGAACT",4,61.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19T I88Q",2
"lib2","SARS-CoV-2","ACGATAGTAAGAAACT",4,16.32,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D112Y L183A",2
"lib2","SARS-CoV-2","ACGATAGTATAGAAAT",2,0.74,NA,NA,NA,NA,NA,NA,"stop","F47Y S69Q W106I E141* P161H",5
"lib2","SARS-CoV-2","ACGATAGTCGGTCCTA",7,17.35,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G9H Y21N A67F E135R",4
"lib2","SARS-CoV-2","ACGATAGTTGCTGCAT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","W23* V77M L122F P149S",4
"lib2","SARS-CoV-2","ACGATATAACTGATTC",8,54.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2Q R27G S36Y C61I S69W T148Y F156P",7
"lib2","SARS-CoV-2","ACGATATACTACCGGC",6,50.47,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S36L D59E G86C Y165W",4
"lib2","SARS-CoV-2","ACGATATAGCCTGCTT",14,326.21,10.67,-0.16,0.03,2.92,1.08,0,">1 nonsynonymous","G116N Y143F T201S",3
"lib2","SARS-CoV-2","ACGATATAGTGAGTGA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","C6D I28W D90E E135* K199M",5
"lib2","SARS-CoV-2","ACGATATATTGCTCCA",1,31.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25I N40A E141A F156S",4
"lib2","SARS-CoV-2","ACGATATCCCTGATTA",2,75.83,10.86,0.02,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGATATCTATCTCAA",16,101.36,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F44S L60A T100G",3
"lib2","SARS-CoV-2","ACGATATGCACATAGA",5,48.73,8.56,-2.27,0.12,2.67,1.11,0,">1 nonsynonymous","S19T G83R F156K",3
"lib2","SARS-CoV-2","ACGATATGCCGCCGAC",2,2.24,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACGATATGTTAAGTGT",7,75.34,10.45,-0.38,0.05,2.76,1.18,0,">1 nonsynonymous","Y91N D97L",2
"lib2","SARS-CoV-2","ACGATATTAAGAGTGA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","ACGATATTATTTCTAG",2,200.17,10.51,-0.33,0.04,2.9,1.02,0,">1 nonsynonymous","N4A G116T",2
"lib2","SARS-CoV-2","ACGATCAAAAGCATGA",2,20.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L57M N107L Y123S F160S",4
"lib2","SARS-CoV-2","ACGATCAAAGAATTGA",19,9.78,NA,NA,NA,NA,NA,NA,"stop","T63* R78T A145Q",3
"lib2","SARS-CoV-2","ACGATCAATATGCAAT",2,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D C158W",2
"lib2","SARS-CoV-2","ACGATCACAACCCTAC",14,188.9,9.66,-1.18,0.05,2.05,1.04,0,"1 nonsynonymous","F17T",1
"lib2","SARS-CoV-2","ACGATCACATAAATCA",3,48.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F134S P177W",2
"lib2","SARS-CoV-2","ACGATCACTTCCGACA",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87M P96N I104Q V115E",4
"lib2","SARS-CoV-2","ACGATCAGGGCACGGG",13,60.39,6.27,-4.57,0.65,1.5,1.12,0.03,">1 nonsynonymous","C49F Y91G",2
"lib2","SARS-CoV-2","ACGATCATACAGTTTA",1,12.32,10.09,-0.74,0.11,2.88,1.04,0,">1 nonsynonymous","P54R E135D G174K",3
"lib2","SARS-CoV-2","ACGATCATATACGACG",1,62.2,10.68,-0.16,0.07,2.86,1.14,0,">1 nonsynonymous","S41W T55D N110V",3
"lib2","SARS-CoV-2","ACGATCATCAAAAAAA",1,12.62,10.15,-0.68,0.12,2.81,1,0.01,">1 nonsynonymous","F8V Y39V",2
"lib2","SARS-CoV-2","ACGATCATTAAAAATA",2,25.75,10.92,0.09,0.07,3,1.02,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","ACGATCATTAAACTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I L57W F134S E141G N151S",5
"lib2","SARS-CoV-2","ACGATCCAGTACAGAA",2,37.18,6,-4.84,0.67,3,1.26,0,">1 nonsynonymous","D34K D68M F185M",3
"lib2","SARS-CoV-2","ACGATCCGTCAAATTT",3,77.09,8.47,-2.37,0.08,2.87,1.05,0,">1 nonsynonymous","S41A D59N F156D Y178N",4
"lib2","SARS-CoV-2","ACGATCCTAAGCCGAT",4,1.06,NA,NA,NA,NA,NA,NA,"stop","V37M V52L Y91* A105T N120K Y178R A192S",7
"lib2","SARS-CoV-2","ACGATCCTAATCTAAT",7,112.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C150S Y178S T201N",3
"lib2","SARS-CoV-2","ACGATCGTACGATTAA",5,53.97,10.18,-0.66,0.05,2.92,1,0,">1 nonsynonymous","R16S T85E N120L S147R",4
"lib2","SARS-CoV-2","ACGATCTACAGATCTT",4,0.44,NA,NA,NA,NA,NA,NA,"stop","N58E L122* T170V",3
"lib2","SARS-CoV-2","ACGATCTTTAATAGTT",8,1.72,NA,NA,NA,NA,NA,NA,"stop","F44* L122R F156V",3
"lib2","SARS-CoV-2","ACGATCTTTGGAGGCC",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I P96S",2
"lib2","SARS-CoV-2","ACGATGAAAATACACA",2,12.82,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y39Q K56R T85L D97A G172L",5
"lib2","SARS-CoV-2","ACGATGAAATATCTGC",10,15.35,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","T3L R73L W106F Q168L",4
"lib2","SARS-CoV-2","ACGATGAAATTTACAC",1,95.3,10.13,-0.71,0.09,2.47,1.05,0,">1 nonsynonymous","S108M N120K N171F",3
"lib2","SARS-CoV-2","ACGATGAACTAGTAAG",6,189.06,8.62,-2.22,0.05,2.96,1.08,0,">1 nonsynonymous","F62T Y159I",2
"lib2","SARS-CoV-2","ACGATGAATATATTAT",1,9.25,6,-4.84,0.62,3,1,0,">1 nonsynonymous","T15V D59A A145R G152V",4
"lib2","SARS-CoV-2","ACGATGACAGGAGTCA",9,2.33,NA,NA,NA,NA,NA,NA,"stop","L5N D97N N120* E141V",4
"lib2","SARS-CoV-2","ACGATGAGGATTGCGG",10,51.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V71Q T100Y E154G",3
"lib2","SARS-CoV-2","ACGATGAGTATCGAAC",12,83.01,8.73,-2.1,0.27,1.5,1.09,0.03,">1 nonsynonymous","F99T T201N",2
"lib2","SARS-CoV-2","ACGATGATGGAGACCA",2,34.22,10.68,-0.15,0.07,2.98,1.01,0,"1 nonsynonymous","F134A",1
"lib2","SARS-CoV-2","ACGATGCAACAACTGA",2,47.45,10.96,0.13,0.06,2.95,1.03,0,"1 nonsynonymous","I2P",1
"lib2","SARS-CoV-2","ACGATGCATACAGGGA",1,2.51,NA,NA,NA,NA,NA,NA,"stop","F17* R25G S45T Y50* I104T R127H T201*",7
"lib2","SARS-CoV-2","ACGATGCCCGAATTCG",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P P96M",2
"lib2","SARS-CoV-2","ACGATGCGCTCCTAAA",2,21.56,6.14,-4.7,1.41,1.5,1.24,0.05,">1 nonsynonymous","E10R N107V N130A C158R",4
"lib2","SARS-CoV-2","ACGATGCTAATTCGAC",6,0.47,NA,NA,NA,NA,NA,NA,"stop","Y119* T201Q",2
"lib2","SARS-CoV-2","ACGATGGAAGCTCTCG",5,32.46,6,-4.84,1,1.5,1.11,0.01,">1 nonsynonymous","A18G L57H N130C C158W",4
"lib2","SARS-CoV-2","ACGATGGAGGCCGCAA",4,36.96,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D59V V77K D112F",3
"lib2","SARS-CoV-2","ACGATGGCAACAAGTA",3,72.99,10.07,-0.76,0.08,2.56,1.02,0,">1 nonsynonymous","L5K V52D",2
"lib2","SARS-CoV-2","ACGATGGCAAGTACGA",5,0.71,NA,NA,NA,NA,NA,NA,"stop","A14S D137*",2
"lib2","SARS-CoV-2","ACGATGGCTGATTTAA",6,2.75,NA,NA,NA,NA,NA,NA,"stop","T3P K26R D59S F99V Y119V F160I Q168W L183*",8
"lib2","SARS-CoV-2","ACGATGGTTAACTCCC",8,86.26,6.69,-4.15,0.54,1.5,1.18,0.04,">1 nonsynonymous","T3H A22I S53C Y165D P177W",5
"lib2","SARS-CoV-2","ACGATGTCCAGAACCC",4,4.58,NA,NA,NA,NA,NA,NA,"stop","G9L Y50* S129L D137Q F156R V173P",6
"lib2","SARS-CoV-2","ACGATGTGATAACCTT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44Q D59* I142A G166V",4
"lib2","SARS-CoV-2","ACGATGTTAGAAAAGT",4,56.58,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L38S I88F",2
"lib2","SARS-CoV-2","ACGATGTTATGAAAAT",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E A42N F70L P96K L183P",5
"lib2","SARS-CoV-2","ACGATGTTGGTGCATA",2,26.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95W N107E S129V N151T",4
"lib2","SARS-CoV-2","ACGATGTTTAAAGCTT",4,1.03,NA,NA,NA,NA,NA,NA,"stop","A89Y D98V S129T P169L E186T T201*",6
"lib2","SARS-CoV-2","ACGATTAAAAAACCGT",2,49.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F47T K94T",2
"lib2","SARS-CoV-2","ACGATTAAACGTGTGC",5,46.31,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2D S69R R127D",3
"lib2","SARS-CoV-2","ACGATTAAAGACCAGT",8,59.83,9.18,-1.66,0.14,1.5,1.07,0.01,"1 nonsynonymous","L131H",1
"lib2","SARS-CoV-2","ACGATTAACCTTTGAG",3,50.99,8.88,-1.95,0.08,1.94,1.05,0,">1 nonsynonymous","F12S K87L",2
"lib2","SARS-CoV-2","ACGATTAAGATGACTT",2,11.49,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F70Y Y93W F156L",3
"lib2","SARS-CoV-2","ACGATTAAGTAAATCA",3,21.47,10.65,-0.19,0.07,2.93,1.09,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","ACGATTAAGTATTCAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","P7G V32H Q84E I88* L95R A105E",6
"lib2","SARS-CoV-2","ACGATTACACTTATTG",1,19.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V65T A89R G117P",3
"lib2","SARS-CoV-2","ACGATTACGGCGTACA",7,0,NA,NA,NA,NA,NA,NA,"stop","N4* V65M G86I N120L",4
"lib2","SARS-CoV-2","ACGATTAGTAGTCAGG",1,64.12,10.87,0.03,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGATTATAACATCCG",6,48.65,8.1,-2.74,0.24,1.5,1.07,0.02,">1 nonsynonymous","K56A R179Q",2
"lib2","SARS-CoV-2","ACGATTATAACCATGC",6,16.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T55N D98R R124A",3
"lib2","SARS-CoV-2","ACGATTATAAGAGAGT",10,254.88,10.75,-0.09,0.04,2.97,1.05,0,">1 nonsynonymous","I2V I104M",2
"lib2","SARS-CoV-2","ACGATTATCTAATGTA",2,26.35,9.46,-1.38,0.24,1.85,1.12,0.02,">1 nonsynonymous","N1I P96Q",2
"lib2","SARS-CoV-2","ACGATTATGAAGGCCT",8,36.29,6.86,-3.97,0.29,1.5,1.11,0.01,">1 nonsynonymous","Y39H D59V F99M",3
"lib2","SARS-CoV-2","ACGATTATGATTATAC",1,15.72,10.64,-0.2,0.08,2.81,1.16,0,">1 nonsynonymous","L60F S147F",2
"lib2","SARS-CoV-2","ACGATTCACTGTCTAT",5,38.05,9.05,-1.79,0.11,2.54,1.07,0.01,">1 nonsynonymous","N4M D112E",2
"lib2","SARS-CoV-2","ACGATTGATTCCATCG",2,13.17,10.44,-0.39,0.07,2.85,1.17,0,">1 nonsynonymous","F47L K56S F160Y",3
"lib2","SARS-CoV-2","ACGATTGCATGAGAAC",4,1.25,NA,NA,NA,NA,NA,NA,"stop","C49* F134C",2
"lib2","SARS-CoV-2","ACGATTGGCAGTTGTA",11,100.58,10.16,-0.68,0.05,2.79,1.08,0,">1 nonsynonymous","R27N Q84Y",2
"lib2","SARS-CoV-2","ACGATTGGGAACTCAA",6,12.79,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N13T N64I S69F I88L G101W",5
"lib2","SARS-CoV-2","ACGATTGTACATTACT",10,208.64,10.46,-0.38,0.03,2.9,1.03,0,">1 nonsynonymous","T55Y K94N",2
"lib2","SARS-CoV-2","ACGATTGTGGGTAATA",11,208.24,9.49,-1.35,0.04,2.9,1.07,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ACGATTTAATGCGGAG",8,30.16,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C31T D68N P161F",3
"lib2","SARS-CoV-2","ACGATTTACTATCAGG",1,42.63,10.81,-0.03,0.07,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGATTTATTCATTGA",6,68.13,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","T85V P96M P177H",3
"lib2","SARS-CoV-2","ACGATTTATTCGAGTT",1,3.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102H",1
"lib2","SARS-CoV-2","ACGATTTCACTCTCCC",4,69.88,10.86,0.02,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGATTTCATCCTGCG",8,92.18,10.87,0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGATTTCTTTTCGGC",4,25.47,6.11,-4.73,0.78,1.5,1.14,0.02,">1 nonsynonymous","S69L G74M G101E F156S",4
"lib2","SARS-CoV-2","ACGATTTGTGAAGGAC",6,133.42,7.77,-3.07,0.2,1.5,1.07,0.01,">1 nonsynonymous","V20L K114D",2
"lib2","SARS-CoV-2","ACGATTTTACAAAGGA",2,9.99,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N13C V37N S43Y P82N N130T G155D",6
"lib2","SARS-CoV-2","ACGATTTTACTCAAAT",10,135.3,9.59,-1.25,0.07,2.15,1.09,0,">1 nonsynonymous","S129W R136I P149K",3
"lib2","SARS-CoV-2","ACGATTTTTCCTACCG",7,59.75,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y50R G116V P169H Q176G",4
"lib2","SARS-CoV-2","ACGCAAAAACCCCATG",2,28.9,9.21,-1.63,0.16,2.57,1.21,0.01,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","ACGCAAAACAGTTGAA",6,112.57,6,-4.84,2,1.5,1.18,0,"1 nonsynonymous","F167T",1
"lib2","SARS-CoV-2","ACGCAAAACCACGGCA",3,113.2,10.88,0.04,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCAAAATTATCATT",1,19.97,6.44,-4.4,0.44,1.58,1.07,0.03,">1 nonsynonymous","S113T C158E",2
"lib2","SARS-CoV-2","ACGCAAACAATCCTAT",2,29.4,9.78,-1.05,0.09,1.97,1.04,0,">1 nonsynonymous","I2V L131A",2
"lib2","SARS-CoV-2","ACGCAAACGAATAAGC",3,168.79,8.79,-2.04,0.07,2.85,1.09,0,">1 nonsynonymous","N58L G166Q",2
"lib2","SARS-CoV-2","ACGCAAAGACATGGTG",6,46.26,10.28,-0.56,0.06,2.82,1.09,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","ACGCAAAGCTCAGCGG",7,21.98,6.55,-4.28,0.53,1.5,1.23,0.03,">1 nonsynonymous","N92T N151H N171Y",3
"lib2","SARS-CoV-2","ACGCAAATAAAAAACG",7,38.04,9.45,-1.39,0.08,2.05,1.01,0,">1 nonsynonymous","C6K G51R P149L",3
"lib2","SARS-CoV-2","ACGCAAATCAATAAAA",12,73.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S43M G117Y F134A I142T N171I",5
"lib2","SARS-CoV-2","ACGCAAATCCCAGTCT",10,6.14,NA,NA,NA,NA,NA,NA,"stop","C6N L162* P197S",3
"lib2","SARS-CoV-2","ACGCAAATCTACCTCG",5,65.27,10.27,-0.57,0.04,2.83,1.04,0,">1 nonsynonymous","R27M F44T",2
"lib2","SARS-CoV-2","ACGCAAATGTCAGATG",3,49.02,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7Q F99D K114L",3
"lib2","SARS-CoV-2","ACGCAACATACGTAGT",3,36.63,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S45R K128I C158F T170M P177T",5
"lib2","SARS-CoV-2","ACGCAACGAAATCGGT",13,0.44,NA,NA,NA,NA,NA,NA,"stop","P169* R179K",2
"lib2","SARS-CoV-2","ACGCAACGCGAGAAAC",1,35.14,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C61L N92K L125C A192Y",4
"lib2","SARS-CoV-2","ACGCAACGGTGGCCTG",3,65.87,10.12,-0.71,0.09,2.71,1.01,0,">1 nonsynonymous","Y21W F62N",2
"lib2","SARS-CoV-2","ACGCAACTAACATCTT",5,4.56,NA,NA,NA,NA,NA,NA,"stop","G83* G101D Y178H",3
"lib2","SARS-CoV-2","ACGCAACTAACGATTA",3,29.3,6,-4.84,2,3,1.25,0,">1 nonsynonymous","S29G L95Q Y175I",3
"lib2","SARS-CoV-2","ACGCAACTCCGAACAA",2,33.1,9.57,-1.27,0.1,2.63,1.07,0,">1 nonsynonymous","D59P K114N P149L",3
"lib2","SARS-CoV-2","ACGCAACTGAACGACA",1,6.91,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A42R A89L L131Q F167I",4
"lib2","SARS-CoV-2","ACGCAAGAAATTTATG",2,8.73,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ACGCAAGAATCACGTC",5,0.48,NA,NA,NA,NA,NA,NA,"stop","T3* L95P F156V Y165D",4
"lib2","SARS-CoV-2","ACGCAAGCACAGCTTT",3,53.57,10.23,-0.61,0.07,2.57,1.05,0,">1 nonsynonymous","D90G K128P",2
"lib2","SARS-CoV-2","ACGCAAGGAACTCAAT",4,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127G N151T",2
"lib2","SARS-CoV-2","ACGCAAGGCGATTTGA",1,30.68,10.09,-0.74,0.1,2.55,1.02,0.01,">1 nonsynonymous","V32G E135H",2
"lib2","SARS-CoV-2","ACGCAAGGCGGCTCAG",6,45.78,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S113I Y159L",2
"lib2","SARS-CoV-2","ACGCAAGTACACAAGT",5,90.71,10.93,0.1,0.05,2.86,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGCAAGTTACATAGA",4,1.1,NA,NA,NA,NA,NA,NA,"stop","T15E W23G S108* K114H E154C Q176V",6
"lib2","SARS-CoV-2","ACGCAATAAAGGAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","N4R N92Y F99* N118T S139N C150Y C158M",7
"lib2","SARS-CoV-2","ACGCAATAATCTCGCA",16,3.39,NA,NA,NA,NA,NA,NA,"stop","T63V T100A S113*",3
"lib2","SARS-CoV-2","ACGCAATCAAATATTT",2,24.31,7.13,-3.7,0.27,1.65,1.13,0.04,">1 nonsynonymous","K94F I142V L162I",3
"lib2","SARS-CoV-2","ACGCAATCACGAGCTG",3,17.41,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F12C Y121H F167W A190S",4
"lib2","SARS-CoV-2","ACGCAATCCACATTTT",2,9.21,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","G86S A105E S200E",3
"lib2","SARS-CoV-2","ACGCAATGCCCAATGT",6,29.02,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6G P82H G166M",3
"lib2","SARS-CoV-2","ACGCAATGTGTACTCT",1,17.99,9.64,-1.2,0.15,2.65,1.01,0.01,">1 nonsynonymous","I2V N64D I142Q Q163S",4
"lib2","SARS-CoV-2","ACGCAATTACCCACAA",3,39.49,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","Y39L Q84L P169D Q176L H189C",5
"lib2","SARS-CoV-2","ACGCAATTTCTGACGA",3,32.63,10.68,-0.15,0.04,2.99,1.05,0,">1 nonsynonymous","T55P P149N",2
"lib2","SARS-CoV-2","ACGCACAAATCAGGCC",4,112.15,10.71,-0.12,0.03,2.88,1.11,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","ACGCACAAGAATTCCC",10,1.26,NA,NA,NA,NA,NA,NA,"stop","N13V L162*",2
"lib2","SARS-CoV-2","ACGCACACGTCCCCTT",12,317.03,10.84,0,0.05,2.91,1.1,0,">1 nonsynonymous","S184T S200Y",2
"lib2","SARS-CoV-2","ACGCACAGTAAAAATC",1,5.01,6.61,-4.23,0.88,3,1.15,0.02,">1 nonsynonymous","T55I G83D G101T",3
"lib2","SARS-CoV-2","ACGCACAGTAATAATC",4,97.82,10.88,0.05,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCACATAATTTTAA",4,46.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A18P G83N N120Q N130S Y159S",5
"lib2","SARS-CoV-2","ACGCACATGTAATTGG",14,90.82,6.28,-4.55,0.84,1.5,1.26,0.03,"1 nonsynonymous","F47D",1
"lib2","SARS-CoV-2","ACGCACCAATTAAAGT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106Q S184E",2
"lib2","SARS-CoV-2","ACGCACCATCCTCACT",7,131.83,8.61,-2.23,0.08,2.09,1.1,0,">1 nonsynonymous","G9F G83V Y119R",3
"lib2","SARS-CoV-2","ACGCACCCATTGCACG",4,9.57,7.66,-3.17,0.46,1.5,1.15,0.06,">1 nonsynonymous","A42S L183H",2
"lib2","SARS-CoV-2","ACGCACCCCAGGGGGA",4,27.21,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T46K L60P R127H",3
"lib2","SARS-CoV-2","ACGCACCGAACGAATC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46K S69T Q84F D98L",4
"lib2","SARS-CoV-2","ACGCACCTCGGCAACA",5,25.07,10.82,-0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCACCTTCTAACTT",6,145.7,9.65,-1.19,0.07,1.99,1.04,0,"1 nonsynonymous","I28E",1
"lib2","SARS-CoV-2","ACGCACGAACCAAAAG",14,135.7,10.86,0.03,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCACGACTACGATT",6,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E G83V C158L Q168I",4
"lib2","SARS-CoV-2","ACGCACGTCTCGATTA",1,39.42,9.17,-1.66,0.15,1.92,1.12,0.01,">1 nonsynonymous","S19K G51R S200L",3
"lib2","SARS-CoV-2","ACGCACTCGTTTAACA",2,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169C",1
"lib2","SARS-CoV-2","ACGCACTTAATCGAAC",33,318.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R124V I138M",2
"lib2","SARS-CoV-2","ACGCACTTGCCCGAGA",9,38.61,10.17,-0.67,0.1,2.44,1.04,0.01,">1 nonsynonymous","A14N F44V N64K",3
"lib2","SARS-CoV-2","ACGCAGAATAACACAG",14,61.94,6.35,-4.49,0.62,1.5,1.16,0.03,">1 nonsynonymous","T63M A81K Y91W E141I",4
"lib2","SARS-CoV-2","ACGCAGAATAATTCGC",9,0.44,NA,NA,NA,NA,NA,NA,"stop","I2* P82Y",2
"lib2","SARS-CoV-2","ACGCAGAATTTGCAAT",4,48.68,9.16,-1.68,0.07,2,1.08,0,">1 nonsynonymous","R27K R124K T148W",3
"lib2","SARS-CoV-2","ACGCAGACAGCACATA",1,34.41,10.58,-0.25,0.05,2.9,1.1,0,"1 nonsynonymous","F185Y",1
"lib2","SARS-CoV-2","ACGCAGAGGAAAAAAT",3,79.4,10.88,0.04,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGCAGAGGAAGCCTA",1,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q163V",1
"lib2","SARS-CoV-2","ACGCAGATACTTTTAA",2,7.41,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","K94E F126P",2
"lib2","SARS-CoV-2","ACGCAGATGTAACTAA",6,62.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20Y S36M R127K",3
"lib2","SARS-CoV-2","ACGCAGCAAGACGTTA",4,139.27,10.7,-0.14,0.05,2.94,1.08,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","ACGCAGCGAAAGATAA",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D N92K Y159V P169V S200R",5
"lib2","SARS-CoV-2","ACGCAGCGGGATCAGG",6,188.3,10.64,-0.2,0.04,2.92,1.08,0,"1 nonsynonymous","F12I",1
"lib2","SARS-CoV-2","ACGCAGCTTATGTCCT",5,72.14,10.13,-0.71,0.05,2.5,1.03,0,">1 nonsynonymous","D34G T193I",2
"lib2","SARS-CoV-2","ACGCAGGGTTTGGATG",6,1.84,NA,NA,NA,NA,NA,NA,"stop","C6A I28P S36W N107L S129T R136* S147H F160R V173M V181E",10
"lib2","SARS-CoV-2","ACGCAGTAAAAATACT",6,88.25,10.77,-0.06,0.05,2.81,1.2,0,">1 nonsynonymous","L5A Y91F D97L",3
"lib2","SARS-CoV-2","ACGCAGTGCTACTAGT",1,70.27,10.75,-0.09,0.03,2.99,1.03,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","ACGCAGTTGCTGTATA",5,59.9,8.07,-2.76,0.13,1.92,1.08,0.01,">1 nonsynonymous","C6H R27Y L122C N151S N171Q",5
"lib2","SARS-CoV-2","ACGCATAACACTCCAT",4,70.77,9.7,-1.13,0.11,1.67,1.05,0.01,">1 nonsynonymous","S36W N107H N120R Q163Y N171W A192L",6
"lib2","SARS-CoV-2","ACGCATACACATATGA",9,114.62,10.83,-0.01,0.03,2.92,1.06,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","ACGCATACACTTGCGG",4,31.09,10.7,-0.13,0.05,3,1.05,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","ACGCATACTGCCATAC",3,0.16,NA,NA,NA,NA,NA,NA,"stop","S29G D34* A67C G116T T201R",5
"lib2","SARS-CoV-2","ACGCATAGAACTTGCA",1,7.86,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F44L G51F Y91G",3
"lib2","SARS-CoV-2","ACGCATATATCGCATC",5,77.07,9.8,-1.03,0.07,1.94,1.1,0,">1 nonsynonymous","K56L A89I",2
"lib2","SARS-CoV-2","ACGCATATCCTTACCG",5,0,NA,NA,NA,NA,NA,NA,"stop","G9T Y39K L57I K87* P96F",5
"lib2","SARS-CoV-2","ACGCATATTAAGGCTA",3,78.44,10.13,-0.71,0.09,2.4,1.03,0,">1 nonsynonymous","G9Q W106R",2
"lib2","SARS-CoV-2","ACGCATATTCGTGCCT",1,49.33,10.26,-0.58,0.07,2.65,1.02,0,">1 nonsynonymous","I2L N107A",2
"lib2","SARS-CoV-2","ACGCATATTGTTATGA",2,20.67,6,-4.84,0.83,3,1.14,0.01,">1 nonsynonymous","P82L F134N P149T F160S",4
"lib2","SARS-CoV-2","ACGCATCAGACTGGTA",1,40.05,7.42,-3.42,0.2,1.6,1.09,0.01,">1 nonsynonymous","N107L I138R",2
"lib2","SARS-CoV-2","ACGCATCCAGGCACTG",1,15.1,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","G51N F62R D68G F134I N151S",5
"lib2","SARS-CoV-2","ACGCATCGAGCAGCCG",4,0.52,NA,NA,NA,NA,NA,NA,"stop","T15M W23L N58V R73A D112S R127* R136Y P149Q S200G",9
"lib2","SARS-CoV-2","ACGCATCGTAACTCAG",8,27.37,7.66,-3.18,0.26,1.5,1.02,0.04,">1 nonsynonymous","S19R K94M S129E",3
"lib2","SARS-CoV-2","ACGCATGAACTCCTTA",3,26.79,10.57,-0.27,0.05,3,1.04,0,">1 nonsynonymous","S29F Y39K N120K",3
"lib2","SARS-CoV-2","ACGCATGGATGTCCCA",2,32.96,9.5,-1.34,0.23,1.65,1.02,0.03,">1 nonsynonymous","K94L N120G",2
"lib2","SARS-CoV-2","ACGCATTAAAAAAATC",9,54.76,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T15G V37N A89W",3
"lib2","SARS-CoV-2","ACGCATTACAATGTCC",16,47,6.12,-4.72,1.26,1.5,1.22,0.05,">1 nonsynonymous","D97N V103Q Q144R P161Q",4
"lib2","SARS-CoV-2","ACGCATTAGTAAATAC",8,17.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A W106S S129M",3
"lib2","SARS-CoV-2","ACGCATTATTTAGAAA",6,81.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9N G86I D112L T140I",4
"lib2","SARS-CoV-2","ACGCATTTCGAGACAA",4,25.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2Y S45F G86E D112E",4
"lib2","SARS-CoV-2","ACGCCAAACTCGTCCA",3,30.61,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C49Y D90C D97I",3
"lib2","SARS-CoV-2","ACGCCAACATGGCTAG",5,103.6,10.23,-0.6,0.06,2.78,1.04,0,">1 nonsynonymous","L5S N13H P149L",3
"lib2","SARS-CoV-2","ACGCCAACTACCCGCA",3,63.86,9.85,-0.98,0.11,2.17,1.03,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","ACGCCAACTTAACAGA",5,49.76,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8N S45E N118G D137F Q168T",5
"lib2","SARS-CoV-2","ACGCCAATAACACATC",17,103.17,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S69M K94S V153I P169C",4
"lib2","SARS-CoV-2","ACGCCAATACACTAAC",1,38.65,10.83,-0.01,0.04,2.98,1.04,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","ACGCCAATCAGTCTCA",2,47.63,10.1,-0.74,0.09,2.67,1.05,0,">1 nonsynonymous","F8L A42S V65L F99L",4
"lib2","SARS-CoV-2","ACGCCACAACATAACA",3,39.22,10.4,-0.43,0.06,2.8,1.04,0,">1 nonsynonymous","L60W D90M",2
"lib2","SARS-CoV-2","ACGCCACAGACCAATT",6,67.76,9.42,-1.42,0.04,2.93,1.1,0,">1 nonsynonymous","P54R N157S",2
"lib2","SARS-CoV-2","ACGCCACATGAAAAAA",16,145.06,10.79,-0.05,0.04,2.93,1.07,0,">1 nonsynonymous","I2K D98G",2
"lib2","SARS-CoV-2","ACGCCACATGTAAAAT",2,48.4,10.16,-0.67,0.06,2.85,1.07,0,"1 nonsynonymous","C6A",1
"lib2","SARS-CoV-2","ACGCCACCGACCATGC",12,0.25,NA,NA,NA,NA,NA,NA,"stop","A18T K56*",2
"lib2","SARS-CoV-2","ACGCCACCGTAGTAGG",9,66.44,10.26,-0.58,0.06,2.73,1.08,0,">1 nonsynonymous","A42S K48Y",2
"lib2","SARS-CoV-2","ACGCCACGTCCCCAGG",2,15.82,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15N N107Q Y119I G174S",4
"lib2","SARS-CoV-2","ACGCCAGCACCCAACA",1,20.58,10.65,-0.19,0.05,2.98,1,0,">1 nonsynonymous","N1T A81S",2
"lib2","SARS-CoV-2","ACGCCAGTAGTAGTAA",8,170.61,10.24,-0.59,0.04,2.83,1.1,0,">1 nonsynonymous","K56T P133S I142V",3
"lib2","SARS-CoV-2","ACGCCATGACACTAAT",11,114.25,9.94,-0.89,0.07,2.55,1.04,0,">1 nonsynonymous","A42S C61S F99Y",3
"lib2","SARS-CoV-2","ACGCCATGGTGCGGTG",3,35.97,10.73,-0.11,0.08,2.89,1.05,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","ACGCCATTAAAACGGA",1,14.83,6,-4.84,2,3,1.05,0,">1 nonsynonymous","G51L G86D G155H",3
"lib2","SARS-CoV-2","ACGCCATTACATATAG",16,133.33,6,-4.84,1.43,1.5,1.23,0.03,">1 nonsynonymous","F12N N118S",2
"lib2","SARS-CoV-2","ACGCCCAAGATAACAT",1,6.26,6.69,-4.14,0.28,1.93,1,0.01,">1 nonsynonymous","L125S C158R",2
"lib2","SARS-CoV-2","ACGCCCAGTGTACATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22G S45T C61S",3
"lib2","SARS-CoV-2","ACGCCCAGTTCAACAA",9,96.78,8.68,-2.16,0.26,1.5,1.02,0.02,">1 nonsynonymous","V11S R16T K48A C61Q R78H G83A K128T V173L",8
"lib2","SARS-CoV-2","ACGCCCCAATCAATAT",5,36.84,8.91,-1.92,0.24,1.55,1.16,0.02,"1 nonsynonymous","V65P",1
"lib2","SARS-CoV-2","ACGCCCCTATTCGCAT",2,34.69,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F12N L57T S69Q C158L",4
"lib2","SARS-CoV-2","ACGCCCCTTTTATATA",7,2.39,NA,NA,NA,NA,NA,NA,"stop","L60T G86V S113L N120* G174V",5
"lib2","SARS-CoV-2","ACGCCCGGCCAATTAC",1,7,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","Y35G G83D S113F",3
"lib2","SARS-CoV-2","ACGCCCGTCTATACAG",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73K I88V Y123R V182F A190T",5
"lib2","SARS-CoV-2","ACGCCCTGGACTCACC",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M N92C Q176V",3
"lib2","SARS-CoV-2","ACGCCCTTATCATACC",5,0,NA,NA,NA,NA,NA,NA,"stop","I28* W106M S200T",3
"lib2","SARS-CoV-2","ACGCCGATAGAAATCA",3,52.16,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V65P C102V S164C",3
"lib2","SARS-CoV-2","ACGCCGTGATAGTGAT",5,71.08,8.83,-2.01,0.09,2.03,1.06,0,">1 nonsynonymous","N118L K128F",2
"lib2","SARS-CoV-2","ACGCCGTTGAGACGTT",5,13.76,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5E Y119I C150I S164F E186Y",5
"lib2","SARS-CoV-2","ACGCCTAAAGAACATG",26,501.36,10.23,-0.61,0.03,2.72,1.05,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","ACGCCTAACCGCAAAT",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M Y143P",2
"lib2","SARS-CoV-2","ACGCCTAATGAGCGAG",3,36.71,6.63,-4.2,0.36,1.5,1.16,0.02,">1 nonsynonymous","G9E I88W",2
"lib2","SARS-CoV-2","ACGCCTACGCAAAAAA",1,17.05,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A89Y G117T Y123V I138C F167I Y178S",6
"lib2","SARS-CoV-2","ACGCCTAGAATTAAAC",2,37.52,10.16,-0.67,0.09,2.31,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","ACGCCTCAACAAAACC",5,155.8,10.75,-0.08,0.03,2.95,1.04,0,">1 nonsynonymous","L5R F62P",2
"lib2","SARS-CoV-2","ACGCCTCATAAATGAC",5,33.02,10.82,-0.02,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCCTCCATTACCGA",5,48.33,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","T63A V77N T140D G166L",4
"lib2","SARS-CoV-2","ACGCCTCTCCAAACAG",3,7.48,10.79,-0.05,0.04,3,1.01,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","ACGCCTGATGAAAGTA",1,13.45,6.45,-4.39,0.55,1.5,1.08,0.04,">1 nonsynonymous","C6W G83V L95R Q163E",4
"lib2","SARS-CoV-2","ACGCCTGTGCCCTAAG",5,30.02,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95C G101L",2
"lib2","SARS-CoV-2","ACGCCTTAAACCCCAT",2,25.49,9.9,-0.94,0.21,1.77,1.04,0.03,">1 nonsynonymous","D59G G83F T100D I138N",4
"lib2","SARS-CoV-2","ACGCCTTAATCAATGC",1,40.05,9.6,-1.24,0.3,1.55,1.05,0.03,"1 nonsynonymous","F17E",1
"lib2","SARS-CoV-2","ACGCCTTACATAAATC",1,10.1,6.7,-4.14,0.63,1.5,1.18,0.07,">1 nonsynonymous","A18T S69K A145F",3
"lib2","SARS-CoV-2","ACGCCTTGCAATGTGG",1,26.21,10.63,-0.21,0.08,2.81,1.19,0,">1 nonsynonymous","C61S N120M",2
"lib2","SARS-CoV-2","ACGCGAAAAACCAAAT",1,15.24,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","E135P G166T",2
"lib2","SARS-CoV-2","ACGCGAAACGCTGACG",10,70.16,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G146T F167L",2
"lib2","SARS-CoV-2","ACGCGAATAGGTATGC",2,17.97,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","V11L S29Q S41W S69L R78S I88W L122G",7
"lib2","SARS-CoV-2","ACGCGACAAATGAGAA",9,195.87,10.75,-0.09,0.05,2.94,1.07,0,">1 nonsynonymous","N1R S147F",2
"lib2","SARS-CoV-2","ACGCGACAACTACAAA",1,39.53,10.7,-0.14,0.03,2.93,1.09,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","ACGCGACAATTGGTCT",7,86.3,10.82,-0.02,0.04,2.92,1.05,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","ACGCGACATAAAACAT",8,108.1,10.87,0.04,0.07,2.91,1.11,0,"1 nonsynonymous","K199F",1
"lib2","SARS-CoV-2","ACGCGACCCGCCATAC",3,70.24,9.46,-1.38,0.08,2.15,1.06,0,">1 nonsynonymous","N107K Q163W",2
"lib2","SARS-CoV-2","ACGCGACTACATAGTT",3,111.1,10.04,-0.79,0.08,2.48,1.04,0,">1 nonsynonymous","G51N R127A N151S",3
"lib2","SARS-CoV-2","ACGCGACTGATAAATA",2,9.39,6,-4.84,2,3,1.35,0.02,">1 nonsynonymous","Y50N I138K",2
"lib2","SARS-CoV-2","ACGCGAGAAAAATAAG",8,45.3,8.98,-1.85,0.2,1.74,1.09,0.02,">1 nonsynonymous","D90I G116I",2
"lib2","SARS-CoV-2","ACGCGAGAGAGTTCAT",1,40.78,10.73,-0.11,0.03,2.99,1.03,0,"1 nonsynonymous","Q144N",1
"lib2","SARS-CoV-2","ACGCGAGCTTTTCTGT",3,111.73,9.16,-1.67,0.04,2.99,1.03,0,">1 nonsynonymous","E10L Y119E P197A",3
"lib2","SARS-CoV-2","ACGCGAGTTAAAAACC",2,103.43,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V37L G86Y N107L E154D K198E",5
"lib2","SARS-CoV-2","ACGCGATACAATCATA",5,65.91,10.8,-0.03,0.1,2.78,1,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","ACGCGATATAATAACT",14,76.18,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3K V37L T85G L95W T100A N118C Q176K",7
"lib2","SARS-CoV-2","ACGCGATATTGGCTTG",18,119.4,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R78S Y91G P96R R179G",4
"lib2","SARS-CoV-2","ACGCGCAATAGTACCA",3,27.39,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","K48Y A89L L122C E186M",4
"lib2","SARS-CoV-2","ACGCGCAATCAACTGA",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47D T100M V173F",3
"lib2","SARS-CoV-2","ACGCGCATATCGAACA",3,40.87,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T46L P82M N157S",3
"lib2","SARS-CoV-2","ACGCGCATTCCGATAG",14,303.9,8.11,-2.72,0.11,2.07,1.15,0,">1 nonsynonymous","S45M Y175A",2
"lib2","SARS-CoV-2","ACGCGCATTCGATCTA",3,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N13H S43M I88Y S184G",5
"lib2","SARS-CoV-2","ACGCGCCAATAGTCAG",24,101.46,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","F12R Y91H A105P E135C",4
"lib2","SARS-CoV-2","ACGCGCCAGGATGATA",9,71.44,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","Y50A A81H",2
"lib2","SARS-CoV-2","ACGCGCCATGCACCAT",4,31.32,10.75,-0.09,0.06,2.92,1.1,0,"1 nonsynonymous","C195F",1
"lib2","SARS-CoV-2","ACGCGCCCAACTTCAT",2,7.45,8.47,-2.36,0.16,2.08,1,0.01,">1 nonsynonymous","L60S P149G G174V K199N",4
"lib2","SARS-CoV-2","ACGCGCGCAAATACAA",2,41.9,10.55,-0.29,0.05,2.93,1,0,">1 nonsynonymous","A18R A33L H189T P197V",4
"lib2","SARS-CoV-2","ACGCGCGCGGCATAAA",7,121.42,7.87,-2.97,0.09,1.76,1.11,0,">1 nonsynonymous","N4G D34G D90H F156T",4
"lib2","SARS-CoV-2","ACGCGCGTGCGAATAT",5,64.32,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11C S45V G86C D90K",4
"lib2","SARS-CoV-2","ACGCGCTAAACAAAGT",7,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V F167I",2
"lib2","SARS-CoV-2","ACGCGCTATGGGCACT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12T T55L R73A V103T Y123V T140S Y165*",7
"lib2","SARS-CoV-2","ACGCGCTCCGAATTAC",12,186.75,10.85,0.02,0.04,2.94,1.08,0,"1 nonsynonymous","K199G",1
"lib2","SARS-CoV-2","ACGCGCTGGATTCCTC",2,18.16,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","E10F R27E Y35G D59G G101M",5
"lib2","SARS-CoV-2","ACGCGGACCCCCAACG",8,183.12,10.85,0.02,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCGGACGGGAGTTT",7,37.4,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G9E A89Y L95T A105T E154V",5
"lib2","SARS-CoV-2","ACGCGGATTAACCAAA",1,16.53,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G51I N64L Y119I R127K",4
"lib2","SARS-CoV-2","ACGCGGGTATAATACG",6,68.3,10.11,-0.72,0.04,2.9,1.1,0,">1 nonsynonymous","K87T S139I",2
"lib2","SARS-CoV-2","ACGCGGGTGTGTACAA",6,109.2,10.77,-0.06,0.06,2.88,1.13,0,">1 nonsynonymous","T85G T201V",2
"lib2","SARS-CoV-2","ACGCGGTCAGTATCTA",3,44.62,9.54,-1.3,0.09,2.87,1.1,0,"1 nonsynonymous","Q168V",1
"lib2","SARS-CoV-2","ACGCGTAAAAGACCCA",3,64.09,10.62,-0.22,0.04,2.89,1.12,0,">1 nonsynonymous","I2Q G9M",2
"lib2","SARS-CoV-2","ACGCGTATATCTGTCT",9,0,NA,NA,NA,NA,NA,NA,"stop","V103S V153*",2
"lib2","SARS-CoV-2","ACGCGTCACGCACAGG",6,157.4,10.88,0.05,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCGTCCAAAGAATT",1,35.2,10.65,-0.19,0.05,2.97,1.02,0,"1 nonsynonymous","S129F",1
"lib2","SARS-CoV-2","ACGCGTCCAGTCCATA",11,116.34,10.64,-0.2,0.04,2.99,1,0,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","ACGCGTGAAACCCTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K T63N Y175E V182R",4
"lib2","SARS-CoV-2","ACGCGTGCGCACGGTA",2,12.96,10.83,0,0.06,2.86,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGCGTGTTCGACTAA",1,40.23,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","K26A G83H F99C",3
"lib2","SARS-CoV-2","ACGCGTTAATCGCACG",4,76.33,10.79,-0.05,0.04,3,1.02,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","ACGCGTTAGTCTGCCC",3,34.15,10.82,-0.02,0.12,2.84,1.15,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","ACGCGTTTCAATATAA",4,28.81,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","G51L N58F P82L K87R",4
"lib2","SARS-CoV-2","ACGCTAAAAACAGCTG",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V P96G",2
"lib2","SARS-CoV-2","ACGCTAAACGCAGATA",1,8.42,6,-4.84,0.89,3,1.05,0.01,">1 nonsynonymous","N4L P82S T148V",3
"lib2","SARS-CoV-2","ACGCTAACGGATCTTA",3,15.88,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y21W C150L",2
"lib2","SARS-CoV-2","ACGCTAACGGTCTTAA",3,9.78,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","C49S W106M S113P",3
"lib2","SARS-CoV-2","ACGCTAACTGATCAAA",3,19.85,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","F8L G51V V77P K128G",4
"lib2","SARS-CoV-2","ACGCTAAGAAAATCTT",6,81.21,9.59,-1.24,0.06,2.94,1.04,0,">1 nonsynonymous","Y35I Y119N Y178F",3
"lib2","SARS-CoV-2","ACGCTAAGCTAAAATG",9,16.74,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V103S Y119V T201Y",3
"lib2","SARS-CoV-2","ACGCTAAGGATAATAA",14,235.62,10.85,0.01,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ACGCTAAGGCTAGCCT",5,19,6.13,-4.7,0.92,1.5,1.08,0.03,">1 nonsynonymous","I2M A42I N92Y",3
"lib2","SARS-CoV-2","ACGCTAATACCAATCT",7,22,10.04,-0.79,0.29,1.83,1.06,0.04,">1 nonsynonymous","N13Y N64W R73M D97L",4
"lib2","SARS-CoV-2","ACGCTAATTAGTTACT",3,43.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86V D112Q",2
"lib2","SARS-CoV-2","ACGCTACAAATTGACT",1,30.75,10.52,-0.32,0.08,2.9,1.06,0,">1 nonsynonymous","N40S N120L",2
"lib2","SARS-CoV-2","ACGCTACACTTATACC",2,22.31,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","E10T N30R A67R T148S S164L R179T",6
"lib2","SARS-CoV-2","ACGCTACATATTCAAT",3,33.06,10.57,-0.27,0.06,3,1.02,0,">1 nonsynonymous","C61L N120R",2
"lib2","SARS-CoV-2","ACGCTACGGTGATAGG",1,13.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F V37E I88N S139I A192T",5
"lib2","SARS-CoV-2","ACGCTACTATATTGCA",2,28.26,10.84,0,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCTACTTTTCCCCA",7,1.26,NA,NA,NA,NA,NA,NA,"stop","V32A D98* V180K",3
"lib2","SARS-CoV-2","ACGCTAGAAATGAAAT",6,0.56,NA,NA,NA,NA,NA,NA,"stop","L57S V77K K87R D98P S113L Y123* T148M",7
"lib2","SARS-CoV-2","ACGCTAGATAATGATG",4,51.6,10.33,-0.5,0.05,2.79,1.08,0,">1 nonsynonymous","S36P T63S T100Y A190V P197S",5
"lib2","SARS-CoV-2","ACGCTAGTTAGAAGTA",2,12.15,6,-4.84,2,1.5,1.22,0.08,"1 nonsynonymous","F47M",1
"lib2","SARS-CoV-2","ACGCTATACTACTTAT",3,28.29,6,-4.84,1.15,1.5,1.07,0.01,">1 nonsynonymous","N40Y Q79R Y119L P149N Q168N",5
"lib2","SARS-CoV-2","ACGCTATCCGAGTCCC",3,5.51,8.62,-2.22,0.15,2.78,1.08,0.01,"1 nonsynonymous","I142G",1
"lib2","SARS-CoV-2","ACGCTATGGTAGTAAA",5,13.03,6,-4.84,0.79,2.86,1.04,0,">1 nonsynonymous","C61R K94W P161Q",3
"lib2","SARS-CoV-2","ACGCTATTATAAATCA",9,163.06,10.84,0.01,0.03,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCTCAAACATTATG",1,21.29,9.81,-1.03,0.1,2.09,1.04,0,">1 nonsynonymous","N64M W106Y T140M",3
"lib2","SARS-CoV-2","ACGCTCAATCTGACAT",2,28.03,7.48,-3.35,0.39,1.5,1.07,0.05,">1 nonsynonymous","S19A T85Y S113C",3
"lib2","SARS-CoV-2","ACGCTCACCCGATCAC",2,9.1,10.5,-0.34,0.09,2.74,1.3,0,"1 nonsynonymous","A190I",1
"lib2","SARS-CoV-2","ACGCTCATTCGTACAT",25,241.22,10.83,-0.01,0.04,2.93,1.08,0,">1 nonsynonymous","S41T L122A G152E",3
"lib2","SARS-CoV-2","ACGCTCCAACCCTAAC",11,234.59,10.83,-0.01,0.04,2.99,1.02,0,"1 nonsynonymous","S129N",1
"lib2","SARS-CoV-2","ACGCTCCCAAATATGA",2,0.38,NA,NA,NA,NA,NA,NA,"stop","D97S N110* P133Q S147F V181P",5
"lib2","SARS-CoV-2","ACGCTCCGGTTGCCGC",2,0.17,NA,NA,NA,NA,NA,NA,"stop","C6N S41F T63N D90P P96* A105R",6
"lib2","SARS-CoV-2","ACGCTCCTATACCTGT",1,12.9,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","C61R A89F N130V D137Y",4
"lib2","SARS-CoV-2","ACGCTCCTCAAGGTTG",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E N92H L122I P161Y",4
"lib2","SARS-CoV-2","ACGCTCCTGGCAGAAA",6,31.47,7.41,-3.42,0.37,1.5,1.16,0.04,">1 nonsynonymous","G9N K26Q I88F L122W S129F V173A",6
"lib2","SARS-CoV-2","ACGCTCGAAATAAAAG",11,149.89,10.86,0.03,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCTCGCGGTGCCCA",3,24.33,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","D90P I104V",2
"lib2","SARS-CoV-2","ACGCTCTTCAGTCTTC",3,95.73,10.76,-0.07,0.04,2.96,1.04,0,">1 nonsynonymous","K48N K199N",2
"lib2","SARS-CoV-2","ACGCTGACTGTCCGAC",3,67.09,9.13,-1.7,0.34,1.71,1.22,0.07,">1 nonsynonymous","T15N Y39P G155C Y178R",4
"lib2","SARS-CoV-2","ACGCTGATACCTCTCT",7,130.84,9.29,-1.55,0.11,1.87,1.1,0,">1 nonsynonymous","T55K W106V P149I",3
"lib2","SARS-CoV-2","ACGCTGATTACAGTCC",8,95.13,9.19,-1.65,0.05,1.9,1.13,0,">1 nonsynonymous","F8L Y35N N58R G116V T140S",5
"lib2","SARS-CoV-2","ACGCTGATTCGCATAA",2,34.2,9.68,-1.16,0.06,2.8,1.18,0,">1 nonsynonymous","Y91F I142C",2
"lib2","SARS-CoV-2","ACGCTGATTTATAGAC",12,83.95,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","F47D S129F G172V",3
"lib2","SARS-CoV-2","ACGCTGCACAGAATAA",2,68.72,10.91,0.07,0.06,3,1.01,0,">1 nonsynonymous","S129Q T201S",2
"lib2","SARS-CoV-2","ACGCTGCAGTGTGCCA",3,58.16,7.42,-3.42,0.15,1.5,1.02,0.01,"1 nonsynonymous","N107Y",1
"lib2","SARS-CoV-2","ACGCTGCCCCCCCAAA",3,0.94,NA,NA,NA,NA,NA,NA,"stop","K26G K48*",2
"lib2","SARS-CoV-2","ACGCTGCGAACCAGTA",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y D68V C102Q Y121G E141R",5
"lib2","SARS-CoV-2","ACGCTGCGGGATCTTT",2,11.81,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","I28N S36G K48D Q84W D112I S139I",6
"lib2","SARS-CoV-2","ACGCTGCGGTGTACAT",3,20.73,10.01,-0.83,0.13,2.24,1.09,0.01,"1 nonsynonymous","F8T",1
"lib2","SARS-CoV-2","ACGCTGGAACATCTAA",4,34.71,9.56,-1.27,0.13,2.32,1.07,0.01,">1 nonsynonymous","N64H I88M N130I",3
"lib2","SARS-CoV-2","ACGCTGGGACGGGGAC",3,13.78,9.36,-1.47,0.32,1.81,1,0.02,">1 nonsynonymous","N30S C61L W106L V115P",4
"lib2","SARS-CoV-2","ACGCTGGGTTGTCTTA",3,6.8,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","G9S T55L T63P P82F",4
"lib2","SARS-CoV-2","ACGCTGGTAAATATTT",8,0.43,NA,NA,NA,NA,NA,NA,"stop","S19* G74K P82S E141F T201N",5
"lib2","SARS-CoV-2","ACGCTGGTGATGAACA",2,7.85,7.1,-3.73,0.12,2.37,1.01,0,">1 nonsynonymous","C6L Y91F S139V",3
"lib2","SARS-CoV-2","ACGCTGTAAAACCAAG",2,25.28,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","G9C V37L I88G N157M",4
"lib2","SARS-CoV-2","ACGCTGTCCTACTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L N40A G172R",3
"lib2","SARS-CoV-2","ACGCTTAAAACGCGTA",8,107.61,10.39,-0.44,0.03,2.97,1.04,0,">1 nonsynonymous","T148P V173D",2
"lib2","SARS-CoV-2","ACGCTTAAACCTGACG",5,1.76,NA,NA,NA,NA,NA,NA,"stop","V52L N120M L183*",3
"lib2","SARS-CoV-2","ACGCTTACACGATACT",8,32.88,9.58,-1.26,0.09,2.37,1.07,0,">1 nonsynonymous","N1F C6W",2
"lib2","SARS-CoV-2","ACGCTTACACGGGAAT",5,49.65,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K56D L95Q D97E F99L Y121W N171S",6
"lib2","SARS-CoV-2","ACGCTTACCGAATAAA",6,93.05,9.77,-1.06,0.07,2.07,1.02,0,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","ACGCTTAGGGATATAT",13,73.81,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G101S Q168N",2
"lib2","SARS-CoV-2","ACGCTTATACAATACT",6,98.87,6.18,-4.65,0.82,1.5,1.22,0.02,">1 nonsynonymous","L38K F62M G83A",3
"lib2","SARS-CoV-2","ACGCTTATGGCTAAAA",2,28.14,9.29,-1.54,0.07,2.95,1.05,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","ACGCTTCCACATCTAC",6,16.07,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A33D N58K I104N Y123M N171D Y175R",6
"lib2","SARS-CoV-2","ACGCTTCGATTAGAAA",4,18.17,9.47,-1.36,0.26,1.67,1.03,0.04,">1 nonsynonymous","T100A V180L",2
"lib2","SARS-CoV-2","ACGCTTCTTCACGACT",10,201.12,10.15,-0.68,0.03,2.85,1.05,0,">1 nonsynonymous","N4C N130Y G196W",3
"lib2","SARS-CoV-2","ACGCTTGAAAACCTCA",2,6.17,6,-4.84,2,3,1.28,0.01,"1 nonsynonymous","I88R",1
"lib2","SARS-CoV-2","ACGCTTGATAGAATTA",21,6.68,NA,NA,NA,NA,NA,NA,"stop","V37A N120V L131* P149T P177N T193Y V194G",7
"lib2","SARS-CoV-2","ACGCTTGCACAAGAAG",6,110.52,10.83,0,0.05,2.88,1.13,0,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","ACGCTTGGAAATAACT",5,2.4,NA,NA,NA,NA,NA,NA,"stop","P149* Y175M",2
"lib2","SARS-CoV-2","ACGCTTGGTATGATAA",5,42.69,9.35,-1.49,0.11,2.17,1.17,0.01,">1 nonsynonymous","D112V V173M",2
"lib2","SARS-CoV-2","ACGCTTTATAGCAGTT",1,35.43,10.75,-0.09,0.11,2.8,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGCTTTCATAAGCTT",12,140.09,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4V R127T V180S",3
"lib2","SARS-CoV-2","ACGCTTTCCAATTCCT",7,146.4,10.82,-0.02,0.05,2.96,1.06,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","ACGCTTTCCCTATAAC",10,153.62,10.38,-0.45,0.04,2.92,1.04,0,">1 nonsynonymous","L57V E186D",2
"lib2","SARS-CoV-2","ACGCTTTCGACAATCT",1,7.21,10.71,-0.12,0.1,2.87,1.11,0,"1 nonsynonymous","A33H",1
"lib2","SARS-CoV-2","ACGCTTTGAACATTTT",4,0.55,NA,NA,NA,NA,NA,NA,"stop","Y93I V103* N118A",3
"lib2","SARS-CoV-2","ACGGAAAAAATATGTT",1,22.23,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","L95M S108F",2
"lib2","SARS-CoV-2","ACGGAAAAAGATTTGC",5,75.2,8.4,-2.44,0.17,1.5,1.07,0.01,">1 nonsynonymous","C49Y G174T",2
"lib2","SARS-CoV-2","ACGGAAAACATACCAA",15,442.68,10.84,0.01,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAAAAGTGACTGA",11,33.49,8.61,-2.23,0.38,1.5,1,0.06,">1 nonsynonymous","F44C T63I G146W",3
"lib2","SARS-CoV-2","ACGGAAAATACGCCAA",5,68.52,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S29G F44T K94I N107Y",4
"lib2","SARS-CoV-2","ACGGAAACAAAAAGCA",2,6.76,10.66,-0.17,0.14,2.64,1.39,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAAACAACATAAC",2,82.77,10.86,0.03,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAAACATTTCACA",13,96.15,6,-4.84,2,1.76,1.24,0.01,">1 nonsynonymous","F17V S43M K94I",3
"lib2","SARS-CoV-2","ACGGAAACCTCTGCAT",3,50.25,10.64,-0.2,0.07,2.91,1.11,0,">1 nonsynonymous","L5S K56F F62W",3
"lib2","SARS-CoV-2","ACGGAAAGCGACCAAG",4,40.25,10.79,-0.05,0.04,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAAAGTTATGACA",13,16.25,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","A14W D34F I138F G155L",4
"lib2","SARS-CoV-2","ACGGAAATCAGTAGCC",8,148.99,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9V S36L P82H G116T G146R Y178D T201M",7
"lib2","SARS-CoV-2","ACGGAAATCTGTTGAA",8,124.79,10.92,0.08,0.05,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAAATTCGTCCAG",1,11.34,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","E10V T46L V52F C61R V115S Y165F Y175I K198S",8
"lib2","SARS-CoV-2","ACGGAAATTTTTATAA",10,183.05,10.52,-0.31,0.04,2.92,1.04,0,"1 nonsynonymous","S19A",1
"lib2","SARS-CoV-2","ACGGAACCTGCTGGCG",8,2.22,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","ACGGAACTAGTTTTAG",2,1.22,NA,NA,NA,NA,NA,NA,"stop","W106R K128S P133* A145V P161S",5
"lib2","SARS-CoV-2","ACGGAACTATGTCCGA",1,10.55,8.41,-2.43,0.35,1.5,1,0.07,">1 nonsynonymous","P7S P96Y",2
"lib2","SARS-CoV-2","ACGGAACTTGCATTCT",1,0.64,NA,NA,NA,NA,NA,NA,"stop","N107S F134* G155R",3
"lib2","SARS-CoV-2","ACGGAAGGTGTTACAC",10,69.84,10.49,-0.35,0.04,3,1.01,0,"1 nonsynonymous","F156Y",1
"lib2","SARS-CoV-2","ACGGAAGGTTAAAAGT",15,46.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N13S A18C S113T Y119C K128R",5
"lib2","SARS-CoV-2","ACGGAAGTTAAAGTTG",11,97,9.79,-1.05,0.07,2.22,1.07,0,">1 nonsynonymous","A14L N120L",2
"lib2","SARS-CoV-2","ACGGAATAAATAAATA",8,76.82,6,-4.83,1.2,1.5,1.25,0.02,">1 nonsynonymous","W23K N92R",2
"lib2","SARS-CoV-2","ACGGAATAACACACTT",2,8.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L38S A67D P82L T100C P149S F160N",6
"lib2","SARS-CoV-2","ACGGAATACGCCTATA",5,36.41,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","T15F Y39E I80N P82S R124C",5
"lib2","SARS-CoV-2","ACGGAATATGGTCACA",7,0.15,NA,NA,NA,NA,NA,NA,"stop","N1* S43D G152* L188S",4
"lib2","SARS-CoV-2","ACGGAATCGATAATCG",2,31.66,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61P D90K G152S F167S",4
"lib2","SARS-CoV-2","ACGGAATGTGATGCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q A67I F185N",3
"lib2","SARS-CoV-2","ACGGAATTAGTCTCAA",7,154.76,10.21,-0.62,0.04,2.84,1.05,0,"1 nonsynonymous","L57E",1
"lib2","SARS-CoV-2","ACGGACAATAGATTAG",2,6.63,6.25,-4.59,2,1.5,1.41,0.06,">1 nonsynonymous","A18Y L60F F99M",3
"lib2","SARS-CoV-2","ACGGACACACTCTAAA",6,41.72,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V103W Y121N",2
"lib2","SARS-CoV-2","ACGGACACTTTCTGAA",2,48.35,10.82,-0.02,0.06,2.98,1.04,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","ACGGACAGTCGAGACA",4,63.82,10.8,-0.04,0.04,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGACATATGAGCGG",23,5.4,NA,NA,NA,NA,NA,NA,"stop","I2* T63K V182A",3
"lib2","SARS-CoV-2","ACGGACCAGTAACGAC",7,11.25,NA,NA,NA,NA,NA,NA,"stop","T100N A105* N130S",3
"lib2","SARS-CoV-2","ACGGACCCCATACAAC",8,2.21,NA,NA,NA,NA,NA,NA,"stop","V71* P96C F167R",3
"lib2","SARS-CoV-2","ACGGACCGAATGACAT",4,102.37,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","Y21N V37M K48R D68E D97Y C150L F167R",7
"lib2","SARS-CoV-2","ACGGACGATTAAAGTG",6,98.29,8.61,-2.22,0.11,1.81,1.06,0,">1 nonsynonymous","K114V R127C A190G",3
"lib2","SARS-CoV-2","ACGGACTATCTTCTAA",3,8.18,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F70L R179F",2
"lib2","SARS-CoV-2","ACGGACTCTGAGCAAG",5,15.76,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","F12W V71W T100C",3
"lib2","SARS-CoV-2","ACGGAGAATTCAGTTA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","W23K V77K P96R Y143* G146E",5
"lib2","SARS-CoV-2","ACGGAGACACAACTAC",5,36.89,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y66L C150P T201K",3
"lib2","SARS-CoV-2","ACGGAGACAGGCGCAA",4,26.03,9.53,-1.3,0.21,1.92,1.2,0.02,">1 nonsynonymous","V11D S41V",2
"lib2","SARS-CoV-2","ACGGAGCAATGGGCAT",1,22.42,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V37S P177W",2
"lib2","SARS-CoV-2","ACGGAGCAGGCTATTA",3,15.74,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","L95A P191C T201C",3
"lib2","SARS-CoV-2","ACGGAGCTAGGACACG",5,260.59,10.44,-0.4,0.03,2.91,1.07,0,">1 nonsynonymous","G83D K198T",2
"lib2","SARS-CoV-2","ACGGAGGAATCATGAG",17,213.95,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","G9V R16A N118F L131K",4
"lib2","SARS-CoV-2","ACGGAGGCTGGGTAAA",8,152.94,10.8,-0.04,0.04,2.96,1.06,0,"1 nonsynonymous","L188P",1
"lib2","SARS-CoV-2","ACGGAGGTATACACGT",5,70.17,10.79,-0.05,0.04,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGAGGTCTAGCAAC",3,8.31,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F70D F99S A105R",3
"lib2","SARS-CoV-2","ACGGAGTAAGCAAACA",2,7.92,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9F N130T I142E P161S V173S",5
"lib2","SARS-CoV-2","ACGGAGTACCAAACAG",7,157.61,10.78,-0.06,0.02,2.98,1.03,0,"1 nonsynonymous","G152K",1
"lib2","SARS-CoV-2","ACGGAGTATGCTTAAA",6,20.1,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A14S A22M S147W L183C",4
"lib2","SARS-CoV-2","ACGGAGTATGTAATAT",2,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S F156L",2
"lib2","SARS-CoV-2","ACGGAGTCACCCAACA",1,22.85,10.33,-0.5,0.04,2.89,1.03,0,">1 nonsynonymous","F44P L187S K198C",3
"lib2","SARS-CoV-2","ACGGAGTCACTGGGTG",4,2.22,NA,NA,NA,NA,NA,NA,"stop","I2Y A14V F17L S41P N64* V103L F185D",7
"lib2","SARS-CoV-2","ACGGAGTGGAAACTCG",13,135.55,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","P177E V182W",2
"lib2","SARS-CoV-2","ACGGATAAATACAGAG",8,161.3,10.85,0.01,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGATAGAGGACTTC",8,46.04,6.26,-4.58,0.46,1.67,1.21,0.01,">1 nonsynonymous","D34I D59L D90R Y178C",4
"lib2","SARS-CoV-2","ACGGATAGGTATTCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","R25P L95K F99S F160* P169D Q176L",6
"lib2","SARS-CoV-2","ACGGATATAACAATTG",2,33.69,10.79,-0.05,0.08,2.93,1.06,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","ACGGATATCTGCTAAT",2,28.6,10.78,-0.06,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGATCCACACAGTG",4,2.74,NA,NA,NA,NA,NA,NA,"stop","D97T Y123* N130K V173G",4
"lib2","SARS-CoV-2","ACGGATCCCTCCAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib2","SARS-CoV-2","ACGGATCCGAAACAAA",2,40.42,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","G146E P161N Y175F",3
"lib2","SARS-CoV-2","ACGGATCGCCTTCGTT",14,152.93,10.85,0.02,0.03,2.96,1.04,0,">1 nonsynonymous","Y39L T201S",2
"lib2","SARS-CoV-2","ACGGATGAATAAGCCA",13,185.19,10.17,-0.67,0.03,2.93,1.05,0,">1 nonsynonymous","V37L K56T Y119R",3
"lib2","SARS-CoV-2","ACGGATGATGTTGAGC",4,53.09,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N107T N118D Y121I K128F G155L Y165F",6
"lib2","SARS-CoV-2","ACGGATGATTAATTTG",4,13.82,7.04,-3.8,0.48,1.5,1.01,0.07,">1 nonsynonymous","C6R L95R N151A N157Y",4
"lib2","SARS-CoV-2","ACGGATGCTTGAGTTA",12,1.24,NA,NA,NA,NA,NA,NA,"stop","I28P S41T Y91* T100*",4
"lib2","SARS-CoV-2","ACGGATTAAACTAACA",4,60.09,9.82,-1.02,0.08,2.13,1.06,0,">1 nonsynonymous","L5A F99I",2
"lib2","SARS-CoV-2","ACGGATTACTCAAAAA",3,12.41,7.97,-2.86,0.25,2.49,1.4,0.02,">1 nonsynonymous","D59Q K128A Y143C",3
"lib2","SARS-CoV-2","ACGGATTTACCAGACT",2,14.38,10.03,-0.8,0.1,2,1.02,0,">1 nonsynonymous","L5E F17Q",2
"lib2","SARS-CoV-2","ACGGATTTCGGTTAAG",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100H N120V E135D V173K",4
"lib2","SARS-CoV-2","ACGGCAAAAACAGTAG",2,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V Y93T L122M F160G",4
"lib2","SARS-CoV-2","ACGGCAAAGGGCATCT",1,43.44,10.3,-0.54,0.16,2.41,1.22,0.01,">1 nonsynonymous","C6T F12C T63S",3
"lib2","SARS-CoV-2","ACGGCAACCTTTCAAA",1,59.86,10.85,0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGCAACTAGCAACT",7,21.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T D68R I138M P149A Q163R",5
"lib2","SARS-CoV-2","ACGGCAAGAAAACAAT",4,24.09,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A33K N58I V77Q A81D C102W",5
"lib2","SARS-CoV-2","ACGGCAATGAGAGGAA",7,26.57,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R73A Y93N D112K N171R Y175Q",5
"lib2","SARS-CoV-2","ACGGCACAGCATCAAA",1,43.19,10.25,-0.58,0.06,3,1.03,0,">1 nonsynonymous","F8L A145I",2
"lib2","SARS-CoV-2","ACGGCACCGAAATAGA",3,18.7,10.54,-0.3,0.1,2.86,1.17,0,">1 nonsynonymous","R78L I138M",2
"lib2","SARS-CoV-2","ACGGCACGGGGCGGCG",1,88.33,10.65,-0.18,0.03,2.98,1.03,0,">1 nonsynonymous","T140R A190F",2
"lib2","SARS-CoV-2","ACGGCACTGAAATCTA",8,187.74,9.13,-1.71,0.1,2.41,1.07,0,">1 nonsynonymous","F44T N118Y",2
"lib2","SARS-CoV-2","ACGGCAGATTTCAGTT",1,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N58L P82L K87D",4
"lib2","SARS-CoV-2","ACGGCAGCCCACGTTT",8,187.86,7.08,-3.76,0.25,1.5,1.16,0.02,">1 nonsynonymous","S113R I138R V173Q",3
"lib2","SARS-CoV-2","ACGGCAGGAGCGACTT",16,166.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56S V71E K94W T100Y",4
"lib2","SARS-CoV-2","ACGGCATAATATCGCC",7,116.92,10.5,-0.33,0.03,2.9,1.09,0,">1 nonsynonymous","D98Y V173D T201H",3
"lib2","SARS-CoV-2","ACGGCATACCATGAAC",7,97.65,7.69,-3.15,0.27,1.5,1.04,0.02,"1 nonsynonymous","V71Q",1
"lib2","SARS-CoV-2","ACGGCATAGCACATTA",6,212.42,9.92,-0.92,0.05,2.71,1.05,0,">1 nonsynonymous","C6R D98N",2
"lib2","SARS-CoV-2","ACGGCATAGCGAACAA",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81E I104A F167M",3
"lib2","SARS-CoV-2","ACGGCATCAAATGATC",1,179.52,10.87,0.04,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGCATCACAGACTC",2,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I G83F V103Y N110T G146L",5
"lib2","SARS-CoV-2","ACGGCATCCGCCCCAA",2,23.23,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","R25M V32G L60V Y93C K114M P197V",6
"lib2","SARS-CoV-2","ACGGCATTAAAGACAA",1,9.14,9.11,-1.72,0.23,1.62,1,0.03,">1 nonsynonymous","S36M A67F N107S",3
"lib2","SARS-CoV-2","ACGGCATTACAAAAAC",2,51.38,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K128V F167K K198M",3
"lib2","SARS-CoV-2","ACGGCATTCAAACTCG",5,2.05,NA,NA,NA,NA,NA,NA,"stop","T46L N64K Y91P F99L R136K V180*",6
"lib2","SARS-CoV-2","ACGGCATTGGTAAGGC",4,0.45,NA,NA,NA,NA,NA,NA,"stop","A18G F70G D98W A105V G146*",5
"lib2","SARS-CoV-2","ACGGCCAAACACATGA",12,51.3,9.6,-1.24,0.1,1.9,1.02,0,">1 nonsynonymous","I104N P197A",2
"lib2","SARS-CoV-2","ACGGCCAAATTTAACA",8,46.2,7.28,-3.56,0.31,1.5,1.23,0.03,">1 nonsynonymous","K56D T85K D90Q V103L T140K",5
"lib2","SARS-CoV-2","ACGGCCACCAGGCCTC",4,7.9,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K48F V115C I142E T201M",4
"lib2","SARS-CoV-2","ACGGCCCAATCATGAA",2,45.28,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y93C F99W P197D",3
"lib2","SARS-CoV-2","ACGGCCCACGTATCTA",24,31.33,6.28,-4.56,0.84,1.5,1.26,0.03,">1 nonsynonymous","N1Y C6N S41P E141W P149Q",5
"lib2","SARS-CoV-2","ACGGCCCCGAAGATTG",3,15.23,9.71,-1.12,0.18,2.73,1.04,0.01,">1 nonsynonymous","C6I V37T N110M",3
"lib2","SARS-CoV-2","ACGGCCCGCGCTTAAA",7,117.08,7.5,-3.34,0.12,1.5,1.11,0,">1 nonsynonymous","N24V G117D I142F",3
"lib2","SARS-CoV-2","ACGGCCCGGCCTACAT",5,56.34,10.68,-0.15,0.04,2.93,1.09,0,">1 nonsynonymous","E154N T201V",2
"lib2","SARS-CoV-2","ACGGCCGAAGTCATCA",6,2.14,NA,NA,NA,NA,NA,NA,"stop","D59N P82N Q144* G155S",4
"lib2","SARS-CoV-2","ACGGCCTAATTAGTAT",2,23.23,10.81,-0.03,0.08,2.94,1.09,0,"1 nonsynonymous","K199D",1
"lib2","SARS-CoV-2","ACGGCCTCGGGTATCT",3,7.1,10.47,-0.37,0.14,2.83,1.18,0.01,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","ACGGCGAAACACTTAA",3,65.23,9.29,-1.55,0.08,2.43,1.05,0,">1 nonsynonymous","C6G F134R T201G",3
"lib2","SARS-CoV-2","ACGGCGAAGATGAGAA",4,34.81,10.71,-0.13,0.05,2.87,1.11,0,"1 nonsynonymous","D34N",1
"lib2","SARS-CoV-2","ACGGCGAATAACCATA",13,181.72,10.7,-0.14,0.03,2.96,1.05,0,">1 nonsynonymous","R16Q N58T",2
"lib2","SARS-CoV-2","ACGGCGACGAATATAA",1,15.33,10.1,-0.74,0.19,2.73,1.08,0.01,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","ACGGCGCACAGAGAAA",3,85.07,10.78,-0.06,0.06,2.96,1.07,0,">1 nonsynonymous","K114A L122A",2
"lib2","SARS-CoV-2","ACGGCGCCAAATAATA",7,143.22,10.52,-0.32,0.05,2.95,1.05,0,">1 nonsynonymous","V37Y T148C",2
"lib2","SARS-CoV-2","ACGGCGCGATATGTAA",12,43.04,6.32,-4.51,0.79,1.5,1.29,0.03,">1 nonsynonymous","T3M W23A P149L F156Y S200R",5
"lib2","SARS-CoV-2","ACGGCGGAAAGGTCTA",1,22.76,6,-4.84,2,3,1.07,0,">1 nonsynonymous","W23A L95A",2
"lib2","SARS-CoV-2","ACGGCGGAGACCAAAT",2,20.45,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","S29K S45V R73M V182A",4
"lib2","SARS-CoV-2","ACGGCGGTCGTATACA",2,14.17,8.87,-1.97,0.17,1.73,1.17,0.01,">1 nonsynonymous","L38T D59P T85H H189C",4
"lib2","SARS-CoV-2","ACGGCGTGACAAACGG",7,40.79,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N64R R73M G83V D90Y G116A L131I C150H T201N",8
"lib2","SARS-CoV-2","ACGGCTAAATATATCG",5,103.87,9.86,-0.97,0.07,2.12,1.02,0,"1 nonsynonymous","R136G",1
"lib2","SARS-CoV-2","ACGGCTAACACCGTAT",6,106.71,10.86,0.02,0.05,2.89,1.12,0,">1 nonsynonymous","V37F K56W D97V V153K",4
"lib2","SARS-CoV-2","ACGGCTATCACGTGGC",9,175.25,10.49,-0.35,0.04,2.9,1.05,0,">1 nonsynonymous","Y50F N64I T201G",3
"lib2","SARS-CoV-2","ACGGCTATCACTCGAC",7,129.55,10.65,-0.18,0.03,2.96,1.06,0,">1 nonsynonymous","V153L F160E",2
"lib2","SARS-CoV-2","ACGGCTCATCACATTC",5,11.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P D97Y K199V",3
"lib2","SARS-CoV-2","ACGGCTCTCAACCCCC",6,0.17,NA,NA,NA,NA,NA,NA,"stop","D34N Y35* K94W N151S",4
"lib2","SARS-CoV-2","ACGGCTCTCACTTAAT",3,32.81,10.84,0,0.07,2.96,1.07,0,"1 nonsynonymous","T148M",1
"lib2","SARS-CoV-2","ACGGCTGATTCCGGTA",3,26.94,8.4,-2.43,0.41,1.5,1,0.06,">1 nonsynonymous","F99Y N107K I138M K198A",4
"lib2","SARS-CoV-2","ACGGCTTAATTATAAA",3,30.96,9.47,-1.36,0.17,1.89,1,0.01,">1 nonsynonymous","C61L V77A",2
"lib2","SARS-CoV-2","ACGGCTTAGAAGCGCA",7,171.76,10.02,-0.82,0.05,2.77,1.04,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","ACGGCTTGAACCGTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","V77A A89H L131* T148S P169V",5
"lib2","SARS-CoV-2","ACGGCTTGAGCGACAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105E",1
"lib2","SARS-CoV-2","ACGGCTTTTAACCAAG",5,27.28,10.77,-0.07,0.03,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGGAAAGTTTATAA",7,1.09,NA,NA,NA,NA,NA,NA,"stop","G116* S139R V180N",3
"lib2","SARS-CoV-2","ACGGGAAATGCCAAAA",3,49.24,9.91,-0.93,0.1,2.1,1,0,">1 nonsynonymous","L60Q A89G P149E",3
"lib2","SARS-CoV-2","ACGGGAACAATATATA",2,32.93,10.81,-0.03,0.05,3,1,0,">1 nonsynonymous","I2E S19P N151K V173L",4
"lib2","SARS-CoV-2","ACGGGAACTGTATAAG",2,10.66,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T46N S69L G116D E141T Q163M V173A E186Y",7
"lib2","SARS-CoV-2","ACGGGAATACACTTAT",11,95.2,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N1V D68G P133S P161T",4
"lib2","SARS-CoV-2","ACGGGAATATCTTTCG",6,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C S129C P161T",3
"lib2","SARS-CoV-2","ACGGGACAACCACCGT",2,29.68,10.51,-0.32,0.05,2.98,1.03,0,">1 nonsynonymous","G83C K114A P149Q",3
"lib2","SARS-CoV-2","ACGGGACAATTTACAT",9,48.95,9.03,-1.8,0.32,1.5,1,0.06,">1 nonsynonymous","K56C V103M",2
"lib2","SARS-CoV-2","ACGGGACGCATTGACT",1,40.9,9.07,-1.76,0.13,2.8,1.12,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","ACGGGAGAGAAATATA",11,5.3,NA,NA,NA,NA,NA,NA,"stop","F44H T85* R136T Q168E F185R T201L",6
"lib2","SARS-CoV-2","ACGGGAGGTCACTAAG",8,141.43,10.7,-0.14,0.06,2.85,1.15,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","ACGGGAGTTTTACACG",2,30.05,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F8S D97W S113V",3
"lib2","SARS-CoV-2","ACGGGATACCCCTTCA",2,19.95,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Q79T F99W L122V C150T P197L",5
"lib2","SARS-CoV-2","ACGGGATAGCTAAATT",12,109.9,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G86R P133H C158D",3
"lib2","SARS-CoV-2","ACGGGATCACACTACC",1,40.14,6,-4.84,0.69,3,1.17,0.01,">1 nonsynonymous","G74D Y165G L188D",3
"lib2","SARS-CoV-2","ACGGGCAAAAAAATAA",3,35.36,10.36,-0.47,0.06,2.98,1.01,0,">1 nonsynonymous","S29E Q84R G116P",3
"lib2","SARS-CoV-2","ACGGGCAACAGTTTTA",5,55.5,7.54,-3.29,0.36,1.5,1.17,0.04,">1 nonsynonymous","C61M V77R A105N T148E",4
"lib2","SARS-CoV-2","ACGGGCAACCCTTAGC",4,49.42,9.67,-1.17,0.08,1.86,1.13,0,">1 nonsynonymous","G51M P191L",2
"lib2","SARS-CoV-2","ACGGGCCAAGGTAAAA",8,0.27,NA,NA,NA,NA,NA,NA,"stop","I28* Y50N K128P G166L P197T",5
"lib2","SARS-CoV-2","ACGGGCCACCTCGCTT",3,11.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3M F99A",2
"lib2","SARS-CoV-2","ACGGGCCCCCGGTGAT",3,26.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106N R127E",2
"lib2","SARS-CoV-2","ACGGGCCCTATGTACG",3,1.95,NA,NA,NA,NA,NA,NA,"stop","L38* L95* A105C P133G",4
"lib2","SARS-CoV-2","ACGGGCCCTCGTTCTA",1,9.8,7.36,-3.48,0.33,1.5,1.11,0.02,">1 nonsynonymous","N40G T85L Y121L G155C",4
"lib2","SARS-CoV-2","ACGGGCCGAAACGAGA",8,40.57,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","A22R T46I N107D R136H",4
"lib2","SARS-CoV-2","ACGGGCCTAAGTGTCT",1,6.47,10.58,-0.25,0.08,3,1.05,0,">1 nonsynonymous","Y21W S41R N110K",3
"lib2","SARS-CoV-2","ACGGGCGACGATCAAT",4,33.79,6,-4.84,2,1.5,1.21,0.02,"1 nonsynonymous","V180S",1
"lib2","SARS-CoV-2","ACGGGCGATAAAGGAA",3,228.44,9.87,-0.96,0.05,2.62,1.05,0,">1 nonsynonymous","A33R A42W",2
"lib2","SARS-CoV-2","ACGGGGAACTTTATGA",3,14.27,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","T15F R124E N130S T140C",4
"lib2","SARS-CoV-2","ACGGGGCAGATAATCA",7,41.61,10.39,-0.44,0.04,2.94,1.04,0,">1 nonsynonymous","L60T P149L V194L",3
"lib2","SARS-CoV-2","ACGGGGCGCCCAAATT",3,12.97,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A14L P96L P161G",3
"lib2","SARS-CoV-2","ACGGGGCTAACGAGTT",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T148H G166L",2
"lib2","SARS-CoV-2","ACGGGGGACCGCAAAG",3,15.61,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V52R Y91G K128N L183F K198V",5
"lib2","SARS-CoV-2","ACGGGGTAACAGTCAT",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S V37L S45L P96Y",4
"lib2","SARS-CoV-2","ACGGGTAACGATCCAG",1,34.19,8.7,-2.13,0.08,2.7,1.09,0,">1 nonsynonymous","E10T A14I S139T T170N",4
"lib2","SARS-CoV-2","ACGGGTACTTAGAGGA",3,25.93,11.04,0.2,0.07,3,1,0,">1 nonsynonymous","G9Q N109V L122Q S129R",4
"lib2","SARS-CoV-2","ACGGGTATAACATCGC",6,23.18,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V32D D68K F99I",3
"lib2","SARS-CoV-2","ACGGGTATACCATCAT",5,51.26,8.66,-2.18,0.08,2.88,1.05,0,">1 nonsynonymous","C61I L95I G117K",3
"lib2","SARS-CoV-2","ACGGGTCCGAATGAAT",3,51.67,9.63,-1.21,0.12,2.22,1.07,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","ACGGGTCGAATATACT",7,202.38,10.77,-0.07,0.04,2.95,1.06,0,">1 nonsynonymous","N58H S129Q",2
"lib2","SARS-CoV-2","ACGGGTCTTAATCATA",5,2.4,NA,NA,NA,NA,NA,NA,"stop","E10N C61* N107S L162S",4
"lib2","SARS-CoV-2","ACGGGTGCCACAGCAA",3,12.64,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A81P T85E L122P P169H",4
"lib2","SARS-CoV-2","ACGGGTGGATCAAATT",12,58.26,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","C6P S19A N151P",3
"lib2","SARS-CoV-2","ACGGGTTAAGATGATA",2,26.08,6.72,-4.12,0.45,1.5,1.15,0.03,">1 nonsynonymous","A18E A105L",2
"lib2","SARS-CoV-2","ACGGGTTCTACAATGG",5,88.5,10.49,-0.35,0.07,2.84,1.12,0,">1 nonsynonymous","C6S D59E Y91F L122R",4
"lib2","SARS-CoV-2","ACGGGTTTCTATCGAC",7,51.65,10.78,-0.06,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGTAAACGACGGTA",2,15.34,6,-4.84,2,3,1.15,0.02,">1 nonsynonymous","A81Q G116W I142G",3
"lib2","SARS-CoV-2","ACGGTAAATGCCTTTA",3,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E I80M G86W D98R Y119P E141R",6
"lib2","SARS-CoV-2","ACGGTAACGATTCTTA",5,1.36,NA,NA,NA,NA,NA,NA,"stop","C49A G116L Q168*",3
"lib2","SARS-CoV-2","ACGGTAACGGAAAACT",5,9.93,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","V77N V103D",2
"lib2","SARS-CoV-2","ACGGTAATAAAATGTT",6,25.92,6.31,-4.53,0.91,1.5,1.17,0.03,">1 nonsynonymous","L57E A89C P149R",3
"lib2","SARS-CoV-2","ACGGTAATAATTATGG",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L T55S T201S",3
"lib2","SARS-CoV-2","ACGGTAATACTACCAC",6,83.08,6.22,-4.62,0.54,1.53,1.11,0.01,">1 nonsynonymous","S45L G146K F160C",3
"lib2","SARS-CoV-2","ACGGTAATGACTAGCA",1,14.62,10.43,-0.4,0.11,2.84,1,0.01,">1 nonsynonymous","R27A N120I",2
"lib2","SARS-CoV-2","ACGGTACAGTAAACCT",16,288.06,9.72,-1.12,0.01,2.93,1.05,0,">1 nonsynonymous","K114N P149R G174K",3
"lib2","SARS-CoV-2","ACGGTACATGTGTGAA",4,67.13,9.34,-1.49,0.12,1.78,1.07,0.01,"1 nonsynonymous","Y50N",1
"lib2","SARS-CoV-2","ACGGTACCAACGTTAC",1,27.95,6,-4.84,1.04,3,1.1,0.01,">1 nonsynonymous","N110P P149T N157V T170Y",4
"lib2","SARS-CoV-2","ACGGTACCCACCAATT",6,47.04,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","ACGGTACGAAAGCGGT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V11G R16*",2
"lib2","SARS-CoV-2","ACGGTACTCGCATGCA",2,156.1,9.43,-1.41,0.06,2.81,1.07,0,">1 nonsynonymous","S129K Q176A",2
"lib2","SARS-CoV-2","ACGGTAGGGAATATTC",11,73.24,8.73,-2.1,0.17,1.5,1.06,0.01,">1 nonsynonymous","F8H D90N Y121Q",3
"lib2","SARS-CoV-2","ACGGTATAACATTCTT",2,18.86,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","W106L G155L P169T Y175I R179F",5
"lib2","SARS-CoV-2","ACGGTATAAGACCCAA",4,177.85,9.21,-1.63,0.03,2.9,1.08,0,">1 nonsynonymous","G117S G196W",2
"lib2","SARS-CoV-2","ACGGTATGGAACATTT",1,19.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16Y I72L L95R Y119L",4
"lib2","SARS-CoV-2","ACGGTATTCCCATAGT",2,2.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","ACGGTCAAAGGACACG",10,115.9,6.5,-4.33,0.43,1.5,1.15,0.02,">1 nonsynonymous","A22T Y93I",2
"lib2","SARS-CoV-2","ACGGTCAATGGAAAAG",8,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M Y50S L57P I80T C102S",5
"lib2","SARS-CoV-2","ACGGTCAATTGGGTTG",6,129.91,10.8,-0.04,0.05,2.92,1.07,0,">1 nonsynonymous","A81R L122M",2
"lib2","SARS-CoV-2","ACGGTCACTACTTCAT",3,48.44,10.72,-0.12,0.05,2.97,1.04,0,">1 nonsynonymous","N1R C195F",2
"lib2","SARS-CoV-2","ACGGTCACTTTCAATC",8,64.7,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","F44T D68C T148S",3
"lib2","SARS-CoV-2","ACGGTCATACTACCCT",11,5.07,NA,NA,NA,NA,NA,NA,"stop","S69* K87*",2
"lib2","SARS-CoV-2","ACGGTCCAGAAATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T Y50T I80G Y143W",4
"lib2","SARS-CoV-2","ACGGTCCAGTGAACTA",4,57.47,9.85,-0.98,0.05,2.93,1.05,0,">1 nonsynonymous","F44H K87Q",2
"lib2","SARS-CoV-2","ACGGTCCCTCCAAGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","G116* F134D",2
"lib2","SARS-CoV-2","ACGGTCGAACTATCAT",10,0.15,NA,NA,NA,NA,NA,NA,"stop","N4* C61I Q84K K132T G146E G174H",6
"lib2","SARS-CoV-2","ACGGTCGACAAACGTA",7,56.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T85F C150N F160R P191V",4
"lib2","SARS-CoV-2","ACGGTCGCGACATACT",4,50.56,6,-4.84,1.28,1.5,1.12,0.01,">1 nonsynonymous","Y21G Y119V",2
"lib2","SARS-CoV-2","ACGGTCTACGCATTAG",6,38.42,10.54,-0.29,0.03,2.93,1,0,">1 nonsynonymous","S45V P54K",2
"lib2","SARS-CoV-2","ACGGTCTGATAACTGC",7,117.35,8.22,-2.62,0.17,1.73,1.07,0.01,">1 nonsynonymous","T63D D90G F126I I142M",4
"lib2","SARS-CoV-2","ACGGTCTGGGGTTAGA",13,130.49,10.6,-0.24,0.03,2.88,1.09,0,">1 nonsynonymous","A81G D97M",2
"lib2","SARS-CoV-2","ACGGTGAAACGCGCCA",9,115.79,9.46,-1.38,0.08,1.9,1.07,0,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","ACGGTGAAATTCATAG",5,96.53,10.82,-0.01,0.04,2.93,1.07,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","ACGGTGAAGACATGAT",2,12.87,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G174W R179M",2
"lib2","SARS-CoV-2","ACGGTGAATACTGATC",2,56.34,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y165V Y175P T201N",3
"lib2","SARS-CoV-2","ACGGTGACCAAGACCT",1,5.8,9.92,-0.91,0.35,2.9,1.1,0.02,">1 nonsynonymous","A105P G146N",2
"lib2","SARS-CoV-2","ACGGTGAGTTCACAAT",2,78.28,10.37,-0.46,0.06,2.84,1.08,0,">1 nonsynonymous","R16G R27T T140L",3
"lib2","SARS-CoV-2","ACGGTGCACATCAAAA",13,291.52,10.65,-0.18,0.04,2.91,1.09,0,"1 nonsynonymous","Q84I",1
"lib2","SARS-CoV-2","ACGGTGCCTCTTGAAC",3,10.45,9.68,-1.16,0.41,1.54,1,0.05,">1 nonsynonymous","G51T G83L K128M",3
"lib2","SARS-CoV-2","ACGGTGCCTGCGATAG",4,13.07,6.28,-4.55,0.28,3,1.13,0.01,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","ACGGTGCTTTGACACG",6,27.94,8.09,-2.75,0.19,1.55,1.2,0.02,">1 nonsynonymous","Y91R G116L L122V S200T",4
"lib2","SARS-CoV-2","ACGGTGGCTTCAGCGT",5,78.14,10.17,-0.67,0.08,2.72,1.05,0,">1 nonsynonymous","S41H D59K D90Y",3
"lib2","SARS-CoV-2","ACGGTGGGACCTTTTT",5,69.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F44I G86V L125F",3
"lib2","SARS-CoV-2","ACGGTGTTACAGTCAG",7,61.49,10.88,0.04,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGGTGTTGGTCGCGA",7,35.78,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","S41L N64S S113N R127M",4
"lib2","SARS-CoV-2","ACGGTTAAATAAACAA",8,1.29,NA,NA,NA,NA,NA,NA,"stop","A105* L122W K128V",3
"lib2","SARS-CoV-2","ACGGTTAAGAATCGCT",1,33.88,9.24,-1.6,0.19,1.63,1.09,0.01,">1 nonsynonymous","G51R Y91V S139D",3
"lib2","SARS-CoV-2","ACGGTTCACCAGCAGC",3,62.2,9.54,-1.3,0.05,2.84,1.02,0,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","ACGGTTCATGAGTGAA",7,37.38,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35R N107K K128F S139F",4
"lib2","SARS-CoV-2","ACGGTTCTCACTTTAC",4,37.75,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D112L Y143S T201L",3
"lib2","SARS-CoV-2","ACGGTTCTGTTGAATA",10,1.76,NA,NA,NA,NA,NA,NA,"stop","S53* T100I G155W",3
"lib2","SARS-CoV-2","ACGGTTGAACAAGCGA",4,25.38,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","T85D R136G V181G",3
"lib2","SARS-CoV-2","ACGGTTGGTTAAACCT",8,106.26,10.59,-0.24,0.07,2.87,1.1,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","ACGGTTTAAACCGTCC",3,51.08,10.84,0,0.06,2.91,1.08,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","ACGGTTTCAGTCGGAC",1,37.09,8.31,-2.53,0.11,2.55,1.05,0.01,">1 nonsynonymous","P54S A145P G174S",3
"lib2","SARS-CoV-2","ACGTAAAAAAATGGAA",15,109.64,8.21,-2.62,0.18,1.5,1.04,0.01,">1 nonsynonymous","A67Y G116Q F134L S184L",4
"lib2","SARS-CoV-2","ACGTAAAAATAAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K I142F Q176L",3
"lib2","SARS-CoV-2","ACGTAAAAATAGCTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G166W P191N",2
"lib2","SARS-CoV-2","ACGTAAAAATATGTAG",2,83.57,10.78,-0.06,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTAAAACGGCACTT",19,354.6,10.44,-0.4,0.03,2.89,1.05,0,">1 nonsynonymous","K114S L122Q L162R P197T",4
"lib2","SARS-CoV-2","ACGTAAAACGTAGCGC",11,3.25,NA,NA,NA,NA,NA,NA,"stop","F8* L95C T148S V173R",4
"lib2","SARS-CoV-2","ACGTAAAAGAGTACAA",10,70.38,6,-4.84,1.85,1.5,1.14,0.01,">1 nonsynonymous","P82W S108C N118H",3
"lib2","SARS-CoV-2","ACGTAAAATAAGAACG",6,24.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","ACGTAAAATTCAACCT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N40K L60V R73* R136* S200Q",5
"lib2","SARS-CoV-2","ACGTAAAATTTACCCT",1,76.92,9.91,-0.93,0.05,2.7,1.09,0,">1 nonsynonymous","C6H V77L D97M H189T",4
"lib2","SARS-CoV-2","ACGTAAACAAAACAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","K94V I104* S129N",3
"lib2","SARS-CoV-2","ACGTAAACGTAAATTA",2,28.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56R I88D L95T",3
"lib2","SARS-CoV-2","ACGTAAACTAGTGAAG",8,90.39,9.63,-1.2,0.07,2.59,1.05,0,">1 nonsynonymous","V37C G83N N107S F160R",4
"lib2","SARS-CoV-2","ACGTAAAGTAATCCTC",3,4.68,NA,NA,NA,NA,NA,NA,"stop","S41D R78* D90L A105C T140V T201M",6
"lib2","SARS-CoV-2","ACGTAAAGTACTCGAT",1,5.92,6,-4.84,2,1.5,1.13,0.04,"1 nonsynonymous","Y93G",1
"lib2","SARS-CoV-2","ACGTAAAGTCATCATA",11,3.61,NA,NA,NA,NA,NA,NA,"stop","P96* K114A P177S",3
"lib2","SARS-CoV-2","ACGTAAAGTTCTAGTA",9,174.89,10.74,-0.1,0.03,2.91,1.06,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","ACGTAAATAAAATCAA",1,81.45,8.41,-2.43,0.16,2.97,1,0.01,">1 nonsynonymous","N40S Y175Q",2
"lib2","SARS-CoV-2","ACGTAAATACGAAACC",12,1.49,NA,NA,NA,NA,NA,NA,"stop","F17* V153P",2
"lib2","SARS-CoV-2","ACGTAAATAGGACAAG",3,59.25,10.07,-0.77,0.05,2.56,1.07,0,">1 nonsynonymous","A89C Q144M",2
"lib2","SARS-CoV-2","ACGTAAATCAGACTAG",2,89.07,10.79,-0.05,0.04,2.94,1.08,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","ACGTAACACAGGATTA",14,25.1,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","C6E S41Y Q84I F99S G152N",5
"lib2","SARS-CoV-2","ACGTAACATTAAATAT",5,0,NA,NA,NA,NA,NA,NA,"stop","A18* I28R L122I Y175N",4
"lib2","SARS-CoV-2","ACGTAACATTCCTGAA",8,23.62,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D97L R179W",2
"lib2","SARS-CoV-2","ACGTAACCCCGACATA",12,2.78,NA,NA,NA,NA,NA,NA,"stop","K94* I142L",2
"lib2","SARS-CoV-2","ACGTAACTAACAACTT",19,166.08,10.66,-0.17,0.03,2.95,1.05,0,">1 nonsynonymous","L5H S43A A145G",3
"lib2","SARS-CoV-2","ACGTAACTCCATAATG",4,130.22,10.78,-0.05,0.06,2.9,1.12,0,"1 nonsynonymous","K198P",1
"lib2","SARS-CoV-2","ACGTAAGCAAATTCAG",1,8.6,6.33,-4.51,1.02,1.5,1,0.07,">1 nonsynonymous","A14V S41I G83W R127S F156K Q176L",6
"lib2","SARS-CoV-2","ACGTAAGGAAATAAAA",5,19.71,9.07,-1.76,0.32,1.5,1,0.06,">1 nonsynonymous","F12L A67F G83Y I104V K132L I138M",6
"lib2","SARS-CoV-2","ACGTAAGGACACACTT",4,42.91,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Y91T D97R V103I Q176L",4
"lib2","SARS-CoV-2","ACGTAAGTAATCACAT",15,150.36,6.13,-4.71,0.65,1.5,1.15,0.01,">1 nonsynonymous","T3P S36C S113I",3
"lib2","SARS-CoV-2","ACGTAAGTGGCTCCAA",1,45.45,10.79,-0.04,0.05,2.99,1.03,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","ACGTAATAATAATTCA",2,52.56,10.86,0.02,0.04,2.96,1.05,0,"1 nonsynonymous","S129A",1
"lib2","SARS-CoV-2","ACGTAATACATAACGA",11,113.66,6.65,-4.19,0.34,1.5,1.17,0.01,">1 nonsynonymous","F44I G86E T100K T201Y",4
"lib2","SARS-CoV-2","ACGTAATGCATATGTT",1,51.82,10.79,-0.05,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTAATGTATAATAT",5,26.23,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G117Y P161R",2
"lib2","SARS-CoV-2","ACGTAATTTTTTTTCA",9,151.16,9.85,-0.98,0.07,2.33,1.02,0,">1 nonsynonymous","A89G K114Q",2
"lib2","SARS-CoV-2","ACGTACAAAGGCTTAA",7,64.43,6,-4.84,1.78,1.61,1.25,0.02,">1 nonsynonymous","L57F A105Q Y121W T201P",4
"lib2","SARS-CoV-2","ACGTACAACCATACAC",1,72.84,10.3,-0.54,0.06,2.88,1.07,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","ACGTACAAGCTCATGT",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R V103D C158M T201K",4
"lib2","SARS-CoV-2","ACGTACACATTCATTG",2,70.81,10.62,-0.22,0.04,2.91,1.03,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","ACGTACAGGAATCCTA",9,30.98,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","S69K L95Y G101N N157P T201I",5
"lib2","SARS-CoV-2","ACGTACCAGAAATCCT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y N40H F99I V173G",4
"lib2","SARS-CoV-2","ACGTACCATCGGATAC",6,100.21,10.9,0.06,0.05,2.89,1.11,0,"1 nonsynonymous","K56E",1
"lib2","SARS-CoV-2","ACGTACCCAAACAAAT",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G K56A",2
"lib2","SARS-CoV-2","ACGTACCCGGAAACAC",1,36.01,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L60D A81P A145D",3
"lib2","SARS-CoV-2","ACGTACCCTAGAATAT",3,87.89,10.82,-0.02,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTACCTCAAGCGGA",6,90.87,9.61,-1.22,0.08,1.82,1.1,0,">1 nonsynonymous","A14F S36E N120M",3
"lib2","SARS-CoV-2","ACGTACCTCCATTGGG",5,157.09,8.3,-2.53,0.13,2.65,1.05,0.01,">1 nonsynonymous","A42N N157K K198C",3
"lib2","SARS-CoV-2","ACGTACCTGGTCAGTA",3,23.91,6.67,-4.17,0.1,2.22,1.01,0,">1 nonsynonymous","N1P L60V C150N P197A",4
"lib2","SARS-CoV-2","ACGTACGACAAAATAC",2,22.39,9.3,-1.53,0.15,1.98,1.08,0.01,">1 nonsynonymous","P7L V65W",2
"lib2","SARS-CoV-2","ACGTACGGTATCCAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","I72* A89S N171L F185S",4
"lib2","SARS-CoV-2","ACGTACGGTCCTCCAA",3,60.54,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C6Q C61F Y119L Q144D",4
"lib2","SARS-CoV-2","ACGTACTAAGGCGGTG",1,22,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y66L D112A Q144T R179I",4
"lib2","SARS-CoV-2","ACGTACTCGAGTATCA",8,36.06,9.54,-1.3,0.3,1.5,1.02,0.04,">1 nonsynonymous","I80M K114S I142Y",3
"lib2","SARS-CoV-2","ACGTACTTTGTTCAAT",2,95.83,10.15,-0.69,0.06,2.72,1.04,0,"1 nonsynonymous","L57P",1
"lib2","SARS-CoV-2","ACGTAGAATTCCCCGC",3,25.83,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F8S T100P F156C",3
"lib2","SARS-CoV-2","ACGTAGAATTCTCGAT",4,26.26,10.99,0.15,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTAGACAAAACATA",3,29.2,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V77G P96T E154F C195G",4
"lib2","SARS-CoV-2","ACGTAGACAACGTGGA",5,45.57,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C49Y S139I T201C",3
"lib2","SARS-CoV-2","ACGTAGACGCATAGAA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","N1* R27K P169Y",3
"lib2","SARS-CoV-2","ACGTAGAGCCACAATA",4,2.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","ACGTAGATATAAGTAA",1,57.48,10.25,-0.59,0.04,2.82,1.09,0,">1 nonsynonymous","A14K K94A S129T",3
"lib2","SARS-CoV-2","ACGTAGCAAAAACCGA",1,51.75,10.7,-0.13,0.06,2.97,1.02,0,">1 nonsynonymous","R25S L122K",2
"lib2","SARS-CoV-2","ACGTAGCAAAAAGTAG",4,32.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L I88G L122K",3
"lib2","SARS-CoV-2","ACGTAGCACCCGTGAA",4,55.03,8.91,-1.93,0.12,1.8,1.08,0.01,"1 nonsynonymous","V77Y",1
"lib2","SARS-CoV-2","ACGTAGCCTAATCAAA",2,7.01,9.56,-1.27,0.11,2.43,1.01,0.01,">1 nonsynonymous","L95C T140R",2
"lib2","SARS-CoV-2","ACGTAGCGAAGGTGTG",13,113.64,10.7,-0.14,0.04,2.88,1.03,0,">1 nonsynonymous","E10N A42G",2
"lib2","SARS-CoV-2","ACGTAGCGGGATGTAT",2,21.04,10.95,0.12,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTAGCGTTAATTCG",4,24.74,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","R25G D34N W106T E154S",4
"lib2","SARS-CoV-2","ACGTAGCTAACAGCCC",6,60.97,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44C S113L",2
"lib2","SARS-CoV-2","ACGTAGCTTATTACTC",1,9.35,6,-4.84,2,1.5,1,0,">1 nonsynonymous","N58P P82H D97Y Q176M T201V",5
"lib2","SARS-CoV-2","ACGTAGGACACTTACA",9,1.33,NA,NA,NA,NA,NA,NA,"stop","V37* Y91R",2
"lib2","SARS-CoV-2","ACGTAGGTTCATTTGA",3,61.31,9.1,-1.73,0.13,1.62,1.08,0.01,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","ACGTAGTACAATGGAA",3,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167R",1
"lib2","SARS-CoV-2","ACGTAGTTTTACAGCA",4,41.32,6.63,-4.2,0.55,1.5,1.14,0.04,">1 nonsynonymous","V20T G83M A105F",3
"lib2","SARS-CoV-2","ACGTATAAATAGGCAA",15,243.41,8.7,-2.13,0.06,2.91,1.08,0,">1 nonsynonymous","I142D T201R",2
"lib2","SARS-CoV-2","ACGTATAAGTAAAAAA",6,17.73,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T100Y L131W",2
"lib2","SARS-CoV-2","ACGTATAATAGCGAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S36* V77W",2
"lib2","SARS-CoV-2","ACGTATAGGACATGAG",2,24.3,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R73V N92F V115M N157I",4
"lib2","SARS-CoV-2","ACGTATATATGTTGTG",2,14.08,10.26,-0.58,0.18,1.91,1.04,0.01,">1 nonsynonymous","E76H L95T",2
"lib2","SARS-CoV-2","ACGTATATCGACTCGT",1,1.39,NA,NA,NA,NA,NA,NA,"stop","S45I G51* N92L D97E Y175C",5
"lib2","SARS-CoV-2","ACGTATATGTGCATAT",4,50.72,10.18,-0.66,0.07,2.81,1.01,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","ACGTATCCATCCTCTA",3,46.61,8.49,-2.34,0.17,2.43,1.07,0.01,">1 nonsynonymous","Y39L A81R N157T",3
"lib2","SARS-CoV-2","ACGTATCCCAAATCAG",2,24.16,6.12,-4.71,1.12,1.5,1.1,0.04,">1 nonsynonymous","V11S D97Y V115P Y165L Y175S",5
"lib2","SARS-CoV-2","ACGTATCCCACTCAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","P133* F167R V173L",3
"lib2","SARS-CoV-2","ACGTATCCTCTCCCCA",8,157.05,10.84,0,0.04,2.93,1.09,0,"1 nonsynonymous","S184T",1
"lib2","SARS-CoV-2","ACGTATGATAAAGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","I88H L95S P149W G155V L162* K199R",6
"lib2","SARS-CoV-2","ACGTATGATATAGGTT",1,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118F",1
"lib2","SARS-CoV-2","ACGTATGTAGGCTAAT",7,80.65,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G86W P133Q E154G",3
"lib2","SARS-CoV-2","ACGTATGTATTCGACA",4,15.53,9.53,-1.3,0.15,2.16,1.09,0.01,">1 nonsynonymous","F70D F160W",2
"lib2","SARS-CoV-2","ACGTATGTCCAGTGTG",9,97.05,10.82,-0.02,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTATGTGACTGGAA",4,135.89,10.82,-0.01,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTATTCGGGACAAT",1,19.1,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L5G L60K S129A R136H N157I",5
"lib2","SARS-CoV-2","ACGTATTGAGATACAT",7,139.87,10.82,-0.02,0.05,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTATTGATTAAAAG",1,13.15,8.45,-2.39,0.14,2.05,1.01,0.01,">1 nonsynonymous","A14P S41L Y119T",3
"lib2","SARS-CoV-2","ACGTATTTGAAGATTT",1,26.2,10.18,-0.66,0.13,2.62,1.18,0.01,">1 nonsynonymous","T3C S43I K114Y",3
"lib2","SARS-CoV-2","ACGTCAAAAGTGCTCT",2,73.91,10.54,-0.3,0.06,2.96,1.06,0,"1 nonsynonymous","L122D",1
"lib2","SARS-CoV-2","ACGTCAAACCGATACA",7,135.02,9.98,-0.85,0.07,2.67,1.01,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","ACGTCAAACGACGAAA",1,18.95,6.91,-3.92,0.29,1.78,1.17,0.02,">1 nonsynonymous","G83N N107R G117D",3
"lib2","SARS-CoV-2","ACGTCAACGTTTTGAG",4,0.05,NA,NA,NA,NA,NA,NA,"stop","N107H P169*",2
"lib2","SARS-CoV-2","ACGTCAAGAATAATAA",5,185.15,10.78,-0.05,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTCAAGCCTATAGC",2,66.63,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R27L F62G D68P A89D",4
"lib2","SARS-CoV-2","ACGTCAATGGACGCGG",10,191.37,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N64G Y93V S129L Y143P G152V Y175C",6
"lib2","SARS-CoV-2","ACGTCAATTAAATAAT",8,41,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S45K V103T Y143L",3
"lib2","SARS-CoV-2","ACGTCAATTTACAGCG",10,93.38,8.05,-2.78,0.13,1.58,1.09,0,">1 nonsynonymous","R27E S41L N107L",3
"lib2","SARS-CoV-2","ACGTCACATTCCACTT",11,96.25,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N1I R16L G101I Y165F",4
"lib2","SARS-CoV-2","ACGTCACTTACAAGAG",1,36.04,8.66,-2.18,0.08,2.33,1.09,0,">1 nonsynonymous","D97H Q176L",2
"lib2","SARS-CoV-2","ACGTCAGCAGATTATT",4,29.44,10.8,-0.04,0.06,3,1.03,0,"1 nonsynonymous","Q144N",1
"lib2","SARS-CoV-2","ACGTCATAAGAAAGAG",1,10.05,9.38,-1.46,0.28,2.43,1.14,0.04,">1 nonsynonymous","C61I A89C T100K",3
"lib2","SARS-CoV-2","ACGTCATCCGTGTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G A105G S113A C158V T170M",5
"lib2","SARS-CoV-2","ACGTCATTACAGGTAC",8,28.61,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C61L I80W G116P",3
"lib2","SARS-CoV-2","ACGTCCAAAGAAATGA",9,85.05,10.89,0.06,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTCCAAGATAATAC",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M Y93S R124Q",3
"lib2","SARS-CoV-2","ACGTCCACAAACTGAG",1,6.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88N D112K I138A",3
"lib2","SARS-CoV-2","ACGTCCACGCCTTTCA",11,1.82,NA,NA,NA,NA,NA,NA,"stop","S19P A42R K56* V115W P149S",5
"lib2","SARS-CoV-2","ACGTCCATACACTTAG",5,84.09,9.62,-1.21,0.07,1.87,1.05,0,">1 nonsynonymous","A33G A81D",2
"lib2","SARS-CoV-2","ACGTCCATTTCGCTTA",1,7.27,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5R G101C S113H",3
"lib2","SARS-CoV-2","ACGTCCGACCATCAAT",9,8.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15Q V103T Q168L",3
"lib2","SARS-CoV-2","ACGTCCTAACACCCCA",6,204.85,7.99,-2.84,0.14,2.08,1.07,0.01,">1 nonsynonymous","L5C C61R Y143N",3
"lib2","SARS-CoV-2","ACGTCCTCTCTACTGT",17,28.96,6,-4.84,1.6,1.83,1.26,0.03,">1 nonsynonymous","S29C L38S G83L",3
"lib2","SARS-CoV-2","ACGTCGAAGCGACATC",2,5.73,10.83,-0.01,0.09,3,1.04,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","ACGTCGAAGTTTATAG",6,53.01,10.16,-0.68,0.06,2.76,1.14,0,"1 nonsynonymous","L57T",1
"lib2","SARS-CoV-2","ACGTCGATATTAGATG",1,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C V182L",2
"lib2","SARS-CoV-2","ACGTCGATATTGTGCT",3,86.47,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","E10W A18V A42G C49V K94T S129I A145T",7
"lib2","SARS-CoV-2","ACGTCGCCGAAAAGAG",6,54.88,10.74,-0.09,0.03,2.93,1.05,0,">1 nonsynonymous","V37A S45Y",2
"lib2","SARS-CoV-2","ACGTCGCGCCAAGTTA",2,1.89,NA,NA,NA,NA,NA,NA,"stop","C31Q G51L G116T R124* I142M R179P",6
"lib2","SARS-CoV-2","ACGTCGGCAGGCCCGT",4,7.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5H S43G F99C G172W",4
"lib2","SARS-CoV-2","ACGTCTAAAACCAAAA",1,24.79,10.69,-0.14,0.06,2.9,1.13,0,">1 nonsynonymous","L5V P149S",2
"lib2","SARS-CoV-2","ACGTCTAACAAACGAA",1,28.72,10.74,-0.1,0.04,2.87,1.13,0,"1 nonsynonymous","N151R",1
"lib2","SARS-CoV-2","ACGTCTACTAAAGCAT",5,43.57,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N107L G117C S139R",3
"lib2","SARS-CoV-2","ACGTCTCAGCTCGTGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y C61G D90K R124W T201S",5
"lib2","SARS-CoV-2","ACGTCTCGTATCAAAT",3,40.14,7.97,-2.86,0.26,1.5,1.14,0.02,">1 nonsynonymous","N107G R136I",2
"lib2","SARS-CoV-2","ACGTCTCTAGCCCAAC",6,124.01,10.9,0.06,0.05,2.91,1.1,0,"1 nonsynonymous","Q163K",1
"lib2","SARS-CoV-2","ACGTCTCTATAGAGTA",8,118.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Q79R A105L Q144W C150S Q176T",5
"lib2","SARS-CoV-2","ACGTCTGAATATACAT",3,11.8,10.69,-0.14,0.11,2.84,1.14,0.01,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","ACGTCTTAAACGCAAA",2,14.09,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N24T V77C G83S A105N T170Q Y175C",6
"lib2","SARS-CoV-2","ACGTCTTAAACTTTCC",3,60.65,10.78,-0.06,0.06,2.92,1.06,0,">1 nonsynonymous","V115I G152R",2
"lib2","SARS-CoV-2","ACGTGAATAATACACT",15,76.02,9.14,-1.69,0.14,1.6,1.09,0.01,"1 nonsynonymous","W23Q",1
"lib2","SARS-CoV-2","ACGTGACAGAAAACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","I72K N110H Y119* T148I",4
"lib2","SARS-CoV-2","ACGTGACGAAGTGTAA",3,39.39,8.72,-2.11,0.18,1.87,1.12,0.01,">1 nonsynonymous","S108I V173L",2
"lib2","SARS-CoV-2","ACGTGACGGAGGCGGG",7,79.18,9.16,-1.68,0.1,2.3,1.06,0,">1 nonsynonymous","C6A Q84H K87I L111K",4
"lib2","SARS-CoV-2","ACGTGAGCAAAAGTTT",3,25.13,6,-4.84,2,3,1.08,0,">1 nonsynonymous","D112L D137L",2
"lib2","SARS-CoV-2","ACGTGAGGTCAACTTA",2,5.56,NA,NA,NA,NA,NA,NA,"stop","A33* V103N",2
"lib2","SARS-CoV-2","ACGTGATACAATTCCC",3,45.4,10.8,-0.03,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTGATATAAAGGGT",14,158.77,10.83,-0.01,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTGATCAAGCCCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","D68G D90N D97P V103E Y123M K128* F160D",7
"lib2","SARS-CoV-2","ACGTGATGTGAAGAAC",8,74.61,8.58,-2.25,0.11,1.84,1.09,0.01,">1 nonsynonymous","V65R Y121P",2
"lib2","SARS-CoV-2","ACGTGCACAGAGTGGT",11,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F L95R",2
"lib2","SARS-CoV-2","ACGTGCGAGTACGGTG",2,30.32,8.59,-2.25,0.17,2.08,1.07,0.01,">1 nonsynonymous","N24I C61L T170L P197L",4
"lib2","SARS-CoV-2","ACGTGCTCGCAGACGA",5,79.98,10.35,-0.49,0.03,2.9,1.06,0,">1 nonsynonymous","Y91L G152R",2
"lib2","SARS-CoV-2","ACGTGCTCTGCCAGTA",2,49.97,10.76,-0.07,0.03,3,1,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","ACGTGGAACGCGTAGT",2,25.85,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F44I D68T I104A K132Q A192H",5
"lib2","SARS-CoV-2","ACGTGGCTATTACGAT",2,24.82,10.76,-0.08,0.04,2.88,1.12,0,"1 nonsynonymous","V115Q",1
"lib2","SARS-CoV-2","ACGTGTCTATCCAAAC",3,55.87,10.76,-0.08,0.06,2.86,1.16,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","ACGTTAAACAATCTAG",4,123.74,10.63,-0.2,0.03,3,1.01,0,">1 nonsynonymous","K87H P149L",2
"lib2","SARS-CoV-2","ACGTTAAAGGTACCTA",3,8.94,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","A67D K87S",2
"lib2","SARS-CoV-2","ACGTTAAATGGATAGC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","N92H Y121* I138H",3
"lib2","SARS-CoV-2","ACGTTAAATTGACGTC",7,43.75,9.25,-1.59,0.12,2.18,1.04,0.01,">1 nonsynonymous","V37D F62D G152C",3
"lib2","SARS-CoV-2","ACGTTAACCAGGTAGT",12,2.76,NA,NA,NA,NA,NA,NA,"stop","C102V T201*",2
"lib2","SARS-CoV-2","ACGTTAAGATTAACGT",2,11.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85R D137W P197H",3
"lib2","SARS-CoV-2","ACGTTAAGTAGCTAGT",3,60.63,8.28,-2.56,0.17,1.8,1.03,0.01,">1 nonsynonymous","D90S S113Q",2
"lib2","SARS-CoV-2","ACGTTAATAACCTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P54L I72V A81M S113V F156*",5
"lib2","SARS-CoV-2","ACGTTAATAGAGAATT",6,110.41,10.79,-0.04,0.04,2.96,1.06,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","ACGTTACAAACTCCCG",2,2.5,NA,NA,NA,NA,NA,NA,"stop","V37S V71* A81H",3
"lib2","SARS-CoV-2","ACGTTACAAGAACTAG",2,19.08,10.44,-0.39,0.05,2.93,1.05,0,">1 nonsynonymous","G174T T201N",2
"lib2","SARS-CoV-2","ACGTTACCAAGCCATA",2,42.36,10.38,-0.46,0.07,2.75,1.05,0,">1 nonsynonymous","D34Q A42P",2
"lib2","SARS-CoV-2","ACGTTACCCAGGTAAA",7,30.35,6.77,-4.07,0.59,1.5,1.12,0.07,">1 nonsynonymous","C31S C49I",2
"lib2","SARS-CoV-2","ACGTTACCCAGTCGAG",3,21.95,9.76,-1.08,0.28,1.72,1.05,0.04,">1 nonsynonymous","K48N S69L D97M",3
"lib2","SARS-CoV-2","ACGTTACCCTCTCAAA",1,11.49,10.47,-0.36,0.09,2.95,1.09,0,"1 nonsynonymous","I138W",1
"lib2","SARS-CoV-2","ACGTTACCGAATTAAT",3,59.55,10.81,-0.03,0.06,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTTACGTCACTTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","D90G L122*",2
"lib2","SARS-CoV-2","ACGTTACTCATATGTA",4,35.16,10.83,0,0.06,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTTAGAAAGTGCCT",2,5.19,8.9,-1.94,0.32,1.5,1.09,0.03,">1 nonsynonymous","L5M K94L S184R",3
"lib2","SARS-CoV-2","ACGTTAGAACCGTGTT",5,66.15,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K94S F99L S184H",3
"lib2","SARS-CoV-2","ACGTTAGAAGCTTGCG",3,0.75,NA,NA,NA,NA,NA,NA,"stop","G74L P149*",2
"lib2","SARS-CoV-2","ACGTTAGCCTTCCCTT",2,21.57,10.67,-0.17,0.07,2.99,1,0,"1 nonsynonymous","D59K",1
"lib2","SARS-CoV-2","ACGTTATATATGTCAG",1,23.8,10.48,-0.36,0.04,2.93,1.01,0,">1 nonsynonymous","K56T G152L",2
"lib2","SARS-CoV-2","ACGTTATGGGCTCTAC",5,46.66,10.27,-0.57,0.03,2.87,1.14,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","ACGTTATGTACCAGCT",2,69.78,10.67,-0.17,0.05,2.97,1.05,0,">1 nonsynonymous","T55V E141H K199I",3
"lib2","SARS-CoV-2","ACGTTATTATCAGTCA",1,5.92,10.29,-0.55,0.18,2.33,1,0.01,"1 nonsynonymous","E76N",1
"lib2","SARS-CoV-2","ACGTTATTTATCGGGT",5,108.87,10.8,-0.04,0.04,2.94,1.05,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","ACGTTCAAGCGCGGAA",2,39.68,10.45,-0.38,0.06,2.91,1.06,0,">1 nonsynonymous","S36L K48V",2
"lib2","SARS-CoV-2","ACGTTCAATAATTCTA",6,14.42,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K94G R124H",2
"lib2","SARS-CoV-2","ACGTTCAGTGTGTATC",7,69.27,9.6,-1.24,0.1,2.54,1.05,0,">1 nonsynonymous","G9V Y35I A67F N109M S184T",5
"lib2","SARS-CoV-2","ACGTTCATACATTAGA",2,6.93,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","N1E P96L F126L",3
"lib2","SARS-CoV-2","ACGTTCATGATCATGG",8,111.17,8.77,-2.06,0.15,1.6,1.1,0.01,">1 nonsynonymous","S19M T63P",2
"lib2","SARS-CoV-2","ACGTTCATTCATATGT",1,11.01,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V52S S113P",2
"lib2","SARS-CoV-2","ACGTTCCAAATAACAG",8,71.43,10.81,-0.03,0.04,3,1.03,0,">1 nonsynonymous","N24A N120G",2
"lib2","SARS-CoV-2","ACGTTCCACGTTACAG",3,32.58,11.21,0.38,0.14,2.9,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACGTTCCCTGAGTACT",13,124.34,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","F167K",1
"lib2","SARS-CoV-2","ACGTTCCTTTGGCCCA",9,100.38,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F17P T55G C61I G172L",4
"lib2","SARS-CoV-2","ACGTTCGACTATACGT",7,0.72,NA,NA,NA,NA,NA,NA,"stop","L38K T55S D68* G152K P197F",5
"lib2","SARS-CoV-2","ACGTTCGCATATACAC",5,52.54,10.32,-0.51,0.09,2.51,1.02,0,">1 nonsynonymous","G86D Q168H",2
"lib2","SARS-CoV-2","ACGTTCGGAATCAGGT",8,41.58,6.81,-4.03,0.3,1.5,1.08,0.02,">1 nonsynonymous","T15Y S129Q Y165N",3
"lib2","SARS-CoV-2","ACGTTCGTCCGCCTAC",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F N157A K199N",3
"lib2","SARS-CoV-2","ACGTTCTACTAAACCA",7,60.81,10.35,-0.49,0.06,2.86,1.06,0,">1 nonsynonymous","N13H S36R",2
"lib2","SARS-CoV-2","ACGTTCTATAGATACT",5,29.32,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","N24F V77A K94N L183Q",4
"lib2","SARS-CoV-2","ACGTTCTGATTTGTCA",3,39.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A81L R179V",2
"lib2","SARS-CoV-2","ACGTTCTTATAATCGT",9,38.11,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C31Q F62V K94D E186S",4
"lib2","SARS-CoV-2","ACGTTCTTGCGGTCCA",5,49.93,9.36,-1.48,0.06,2.74,1.13,0,">1 nonsynonymous","E10A L60I Y159W",3
"lib2","SARS-CoV-2","ACGTTGAATACACCAA",18,244.03,10.44,-0.39,0.02,2.93,1.04,0,">1 nonsynonymous","D59L P149Q",2
"lib2","SARS-CoV-2","ACGTTGACAATCAATG",7,51.07,10.85,0.02,0.06,2.94,1.09,0,"1 nonsynonymous","N130A",1
"lib2","SARS-CoV-2","ACGTTGACAATCCAGC",8,126.91,9.82,-1.01,0.04,2.92,1.09,0,">1 nonsynonymous","N30H A145Q",2
"lib2","SARS-CoV-2","ACGTTGACCGATGACC",2,31.77,10.45,-0.38,0.06,2.84,1.12,0,">1 nonsynonymous","T55I L162V",2
"lib2","SARS-CoV-2","ACGTTGAGACTAGAAT",6,22.1,10.54,-0.29,0.41,2.29,1.07,0.06,">1 nonsynonymous","F12L N130V I138S",3
"lib2","SARS-CoV-2","ACGTTGAGAGAATGCC",5,185.3,9.71,-1.13,0.03,2.89,1.09,0,">1 nonsynonymous","E141T T170F",2
"lib2","SARS-CoV-2","ACGTTGAGTGGAACTT",3,54.32,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F62Y F70G T100H D112S T201N",5
"lib2","SARS-CoV-2","ACGTTGATATTTTTTC",2,19.1,9.66,-1.18,0.09,2.43,1.12,0,">1 nonsynonymous","C61Y T85L P149M",3
"lib2","SARS-CoV-2","ACGTTGATTAACGATA",8,104.38,10.28,-0.56,0.04,2.89,1.04,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","ACGTTGCAAAGCCTGA",2,15.43,6.06,-4.77,1.35,1.5,1.15,0.05,">1 nonsynonymous","A14C D34L D98K V103L C150Y",5
"lib2","SARS-CoV-2","ACGTTGCACAAAGATC",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S S53C V71H I88Y D98Y I138G S147Y",7
"lib2","SARS-CoV-2","ACGTTGCGCGGCTGGT",5,106.47,10.73,-0.1,0.02,2.94,1.09,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","ACGTTGGATATAACCT",3,59.91,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y39F K56N G101I A145Y",4
"lib2","SARS-CoV-2","ACGTTGGGAATTCAAA",12,184.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N58F A145K G152T Q168K",4
"lib2","SARS-CoV-2","ACGTTGTAATGTGATA",2,28.66,10.81,-0.03,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACGTTGTACAATGCAA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib2","SARS-CoV-2","ACGTTGTATCCCTACT",3,56.15,9.71,-1.12,0.07,2.44,1.12,0,">1 nonsynonymous","T55C N130I S184E",3
"lib2","SARS-CoV-2","ACGTTGTCTTGTGCAT",2,56.07,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F47D N58S V173I P177M",4
"lib2","SARS-CoV-2","ACGTTGTTAGCGCCTA",3,22.76,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G51P C102S R136M",3
"lib2","SARS-CoV-2","ACGTTGTTGCGACCAC",2,55.63,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","ACGTTGTTGTCCACCC",7,98.99,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14F S36F F99L F167T",4
"lib2","SARS-CoV-2","ACGTTTAAATCCAGAC",2,12.86,9.22,-1.61,0.13,2.74,1.12,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ACGTTTAATATTATAA",3,24.86,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N1K Y39R I88D F134L P161Y",5
"lib2","SARS-CoV-2","ACGTTTATGGGATTAG",4,37.92,10.61,-0.22,0.05,2.93,1.08,0,"1 nonsynonymous","L125F",1
"lib2","SARS-CoV-2","ACGTTTCAGCCTGGGT",1,13.93,10.27,-0.57,0.16,2.95,1.07,0.01,">1 nonsynonymous","F44L K56R",2
"lib2","SARS-CoV-2","ACGTTTCAGGTGGGCA",5,71.87,9.31,-1.53,0.15,1.51,1.06,0.01,">1 nonsynonymous","K26W R136W",2
"lib2","SARS-CoV-2","ACGTTTCTGAACATGC",2,21.77,9.34,-1.5,0.1,1.9,1.11,0.01,">1 nonsynonymous","E76F T85N",2
"lib2","SARS-CoV-2","ACGTTTCTGCCAACAT",5,31.86,6.67,-4.16,0.26,1.5,1.13,0.01,">1 nonsynonymous","C61S L162S",2
"lib2","SARS-CoV-2","ACGTTTGAAAGCATAA",1,11.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77M T85E P96Q",3
"lib2","SARS-CoV-2","ACGTTTGATATGTTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P N24T L125I Q168D",4
"lib2","SARS-CoV-2","ACGTTTGGAACGCCCG",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","ACGTTTGTATTTCAGG",1,18.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F17S D68E S147I F160N Y178S S184C",6
"lib2","SARS-CoV-2","ACGTTTGTTAAAAAAC",6,48.86,9.84,-1,0.1,2.47,1.03,0.01,">1 nonsynonymous","Q84V D98G I138P",3
"lib2","SARS-CoV-2","ACGTTTTACAATTGAG",5,72.26,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4W F12I A105M Y121C",4
"lib2","SARS-CoV-2","ACGTTTTACACAGGTT",7,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9I F62D P82T",3
"lib2","SARS-CoV-2","ACGTTTTCAAGTTTTA",6,98.88,9.08,-1.76,0.08,1.89,1.1,0,">1 nonsynonymous","F17G G116A",2
"lib2","SARS-CoV-2","ACGTTTTCTACGATAA",10,8.15,NA,NA,NA,NA,NA,NA,"stop","Y35M K56* C102V K199F",4
"lib2","SARS-CoV-2","ACGTTTTTAAAAGACA",1,5.1,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","V37H Y50C C158R",3
"lib2","SARS-CoV-2","ACTAAAAACTAAAATT",12,100.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61K A89H I104A A145Y P177W",5
"lib2","SARS-CoV-2","ACTAAAAAGAAAAAAA",6,28.61,10.83,0,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAAAAGCAAATCG",6,70.58,7.06,-3.77,0.17,1.5,1.19,0.01,">1 nonsynonymous","S45R T55G D90M Y119C",4
"lib2","SARS-CoV-2","ACTAAAACAAGTCTGC",1,13.15,10.25,-0.59,0.07,2.99,1.05,0,"1 nonsynonymous","Y35H",1
"lib2","SARS-CoV-2","ACTAAAACACTATACC",1,50.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12G W106R G116E",3
"lib2","SARS-CoV-2","ACTAAAACACTGGTTT",11,171.96,10.18,-0.66,0.03,2.8,1.11,0,">1 nonsynonymous","F44G C61N T85N K198A",4
"lib2","SARS-CoV-2","ACTAAAACAGAATTCT",1,34.87,10.52,-0.31,0.06,3,1.01,0,">1 nonsynonymous","G9Y N110S K128I",3
"lib2","SARS-CoV-2","ACTAAAACGCTATAGC",4,20.83,9.33,-1.51,0.19,2.18,1.01,0.02,">1 nonsynonymous","A14I G155V",2
"lib2","SARS-CoV-2","ACTAAAAGAAAACTTA",3,11.14,9.92,-0.92,0.16,2.3,1,0.01,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","ACTAAAAGACCTGGGT",4,15.47,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D59G F99R T140A",3
"lib2","SARS-CoV-2","ACTAAAAGCGCCAAGC",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S R127G P133M",3
"lib2","SARS-CoV-2","ACTAAAAGTACAAACC",6,0.6,NA,NA,NA,NA,NA,NA,"stop","T3K L57* V77E Q176P",4
"lib2","SARS-CoV-2","ACTAAAAGTGCCGGCG",2,32.59,9.85,-0.99,0.1,2.33,1.02,0,">1 nonsynonymous","G9E P96L L122Q K198L",4
"lib2","SARS-CoV-2","ACTAAAATAAAACGCA",4,14.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P F167V",2
"lib2","SARS-CoV-2","ACTAAAATAAAGTTAT",2,7.01,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42K K48N R73K G83R Y91V N107H P149L",7
"lib2","SARS-CoV-2","ACTAAAATAAGAATAT",2,26.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139G N171T",2
"lib2","SARS-CoV-2","ACTAAAATAAGATAAT",17,283.45,10.42,-0.42,0.02,2.87,1.09,0,">1 nonsynonymous","L122Q L162R",2
"lib2","SARS-CoV-2","ACTAAAATACACACTA",7,83.37,8.58,-2.25,0.12,2.88,1.11,0.01,"1 nonsynonymous","T170I",1
"lib2","SARS-CoV-2","ACTAAAATCTTTAACA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","I2* A14C",2
"lib2","SARS-CoV-2","ACTAAAATGTTTTTAG",4,89.8,10.39,-0.44,0.07,2.72,1.08,0,">1 nonsynonymous","T85R P133F",2
"lib2","SARS-CoV-2","ACTAAACAAATCATGC",5,53,10.27,-0.57,0.05,2.8,1,0,">1 nonsynonymous","N1G A22E D34S",3
"lib2","SARS-CoV-2","ACTAAACAAGTTCTAA",4,36.41,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","I28V Y39S G86L L122S",4
"lib2","SARS-CoV-2","ACTAAACAATCGTTTA",9,2.94,NA,NA,NA,NA,NA,NA,"stop","Y35E G174N Y178*",3
"lib2","SARS-CoV-2","ACTAAACACGAGCCAG",1,35.7,10.62,-0.22,0.05,2.93,1.07,0,">1 nonsynonymous","K56Q G174D",2
"lib2","SARS-CoV-2","ACTAAACACTAAGGGC",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N C61N V77M W106F K114M G117C R136G",7
"lib2","SARS-CoV-2","ACTAAACAGCATTAAT",5,45,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40T L95Y",2
"lib2","SARS-CoV-2","ACTAAACATGAATGTA",3,35.63,11.02,0.19,0.07,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAACATTGTTAAT",8,83.61,9.92,-0.92,0.08,2.2,1.01,0,">1 nonsynonymous","N4T L95T",2
"lib2","SARS-CoV-2","ACTAAACCCGTCGGAT",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K T55N F99R G172L",4
"lib2","SARS-CoV-2","ACTAAACCGCACACAC",4,23.96,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C49F N107I P169S",3
"lib2","SARS-CoV-2","ACTAAACCGTACTAGT",19,107.01,8.2,-2.63,0.15,1.5,1.11,0.01,">1 nonsynonymous","F12M S129I P161G",3
"lib2","SARS-CoV-2","ACTAAACCTCGACTAA",2,58.53,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30L Y66G Y91A G146R",4
"lib2","SARS-CoV-2","ACTAAACGGACGAGAC",2,32.31,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N30K R127L Y165R",3
"lib2","SARS-CoV-2","ACTAAACGGACGATTG",3,41.58,6,-4.84,0.78,3,1.07,0,">1 nonsynonymous","V37S L57C P82S W106V Y123W",5
"lib2","SARS-CoV-2","ACTAAACGTGAATACG",7,95.64,10.83,-0.01,0.05,2.93,1.09,0,"1 nonsynonymous","T63K",1
"lib2","SARS-CoV-2","ACTAAACTCCTCTTGG",7,44.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S29T N107Y C150L H189S",4
"lib2","SARS-CoV-2","ACTAAACTGACAATGA",5,75.26,10.88,0.05,0.06,2.98,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTAAACTGATTTCAG",1,23.39,9.89,-0.94,0.11,2.71,1.06,0.01,">1 nonsynonymous","Y35A S43F C61E F185I",4
"lib2","SARS-CoV-2","ACTAAACTGTGCAAAG",13,421.26,9.34,-1.5,0.07,2.43,1.07,0,">1 nonsynonymous","K132P G174Y",2
"lib2","SARS-CoV-2","ACTAAACTTGCTGATA",7,0.35,NA,NA,NA,NA,NA,NA,"stop","R73P A81T T85A D137* Y175S V181E S200L",7
"lib2","SARS-CoV-2","ACTAAAGAAAGACGAT",3,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A A42W I104G Y143F",4
"lib2","SARS-CoV-2","ACTAAAGCACCATCAA",3,3.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAAGCCGTACAAA",1,66.35,10.8,-0.03,0.06,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAAGCTAGTTCAT",7,106.63,10.42,-0.41,0.03,2.94,1.07,0,">1 nonsynonymous","S53T K87M",2
"lib2","SARS-CoV-2","ACTAAAGGCCCTAATT",2,21.37,10.19,-0.64,0.04,2.85,1,0,">1 nonsynonymous","G9R N24Y",2
"lib2","SARS-CoV-2","ACTAAAGGCTCATTCA",8,80.01,9.43,-1.41,0.07,1.77,1.07,0,">1 nonsynonymous","G9R L95T",2
"lib2","SARS-CoV-2","ACTAAAGGTTTAATTT",1,47.81,8.75,-2.09,0.1,2.73,1.13,0,">1 nonsynonymous","I142S P149L E154H",3
"lib2","SARS-CoV-2","ACTAAAGTAGCTCAAA",4,110.79,10.13,-0.71,0.06,2.77,1.05,0,">1 nonsynonymous","C61L D90Y",2
"lib2","SARS-CoV-2","ACTAAAGTCAAATCAT",5,36.05,10.88,0.04,0.07,2.85,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAAGTGCCGTCCA",2,40.26,9.23,-1.61,0.13,1.64,1.02,0.01,">1 nonsynonymous","T46L I104S N130I S184F",4
"lib2","SARS-CoV-2","ACTAAATAAAAAAATA",3,23.9,10.69,-0.15,0.05,2.88,1.12,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","ACTAAATAAACCACTA",2,16.95,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","A105R N130V E141S Y165R",4
"lib2","SARS-CoV-2","ACTAAATAAGATAACA",5,16.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3S T15I F62N K87N A105L T170Y",6
"lib2","SARS-CoV-2","ACTAAATAATTAATTG",19,97.53,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S41A A81S G117F N151S G166I",5
"lib2","SARS-CoV-2","ACTAAATACTTTATTC",8,47.17,10.77,-0.07,0.08,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAAATAGGTCTATC",2,46.13,9.73,-1.1,0.22,1.89,1.06,0.03,">1 nonsynonymous","I2A G9R W106L S184N",4
"lib2","SARS-CoV-2","ACTAAATATAAACAAA",4,2.37,NA,NA,NA,NA,NA,NA,"stop","D68* V103A",2
"lib2","SARS-CoV-2","ACTAAATCAAAAATCA",5,85.55,10.59,-0.24,0.04,2.91,1.11,0,">1 nonsynonymous","L5S D90L",2
"lib2","SARS-CoV-2","ACTAAATCATTTCCAG",1,10.9,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A33Y S43R N118S R124D",4
"lib2","SARS-CoV-2","ACTAAATCCCTCCTAA",9,89.99,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y93G Y121E",2
"lib2","SARS-CoV-2","ACTAAATCCGGTTGAT",2,8.81,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25L L162D",2
"lib2","SARS-CoV-2","ACTAAATCGACCACAA",5,29.82,8.31,-2.53,0.31,1.5,1.11,0.03,">1 nonsynonymous","N24V G83N F185K",3
"lib2","SARS-CoV-2","ACTAAATCGCAACCCA",14,216.48,10.65,-0.19,0.04,2.95,1.05,0,"1 nonsynonymous","N58M",1
"lib2","SARS-CoV-2","ACTAAATGAAAGACCC",5,34.97,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V32Y V103Q G155R",3
"lib2","SARS-CoV-2","ACTAAATGATAAGGAA",2,16.09,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","K94P T100F A105S E141G E186H",5
"lib2","SARS-CoV-2","ACTAAATTATTAACGA",20,178.7,8.65,-2.19,0.05,1.74,1.08,0,">1 nonsynonymous","L5N C61S D90G G116F T201S",5
"lib2","SARS-CoV-2","ACTAACAAAATTCATA",14,300.56,10.26,-0.58,0.02,2.88,1.03,0,">1 nonsynonymous","S69T E135A",2
"lib2","SARS-CoV-2","ACTAACAAACGAGGTT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Y R124S E135V I142T P169T Q176P K199C",7
"lib2","SARS-CoV-2","ACTAACAACCTGATGT",15,120.71,6,-4.84,1.37,1.5,1.26,0.02,">1 nonsynonymous","G51Y K94D V103Y",3
"lib2","SARS-CoV-2","ACTAACACATTTATCT",4,5.78,10.77,-0.07,0.14,2.75,1.29,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACTAACACTAGTCCGG",16,246.12,7.4,-3.43,0.09,1.66,1.13,0,">1 nonsynonymous","T55C I104V S129G N157R",4
"lib2","SARS-CoV-2","ACTAACAGCATGACAA",9,70.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A89W V180M",2
"lib2","SARS-CoV-2","ACTAACAGGCTCCTCG",2,0.75,NA,NA,NA,NA,NA,NA,"stop","C61S T85W V115* F160T T201*",5
"lib2","SARS-CoV-2","ACTAACATAAAAGACT",4,55.47,6,-4.84,1.46,1.5,1.26,0.02,">1 nonsynonymous","R16V N58S G86S P177E",4
"lib2","SARS-CoV-2","ACTAACATCGCATCAG",6,19.9,7.04,-3.8,0.33,1.5,1.13,0.02,">1 nonsynonymous","N1W V103L",2
"lib2","SARS-CoV-2","ACTAACATTCCTATGT",8,44.14,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","ACTAACCAAATAATCC",1,32.42,6.61,-4.23,0.25,1.5,1.07,0.01,">1 nonsynonymous","F17M Y119V L125R",3
"lib2","SARS-CoV-2","ACTAACCAGACGCGAC",2,36.74,9.84,-1,0.09,2.11,1.03,0,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","ACTAACCAGCACACTT",11,107.68,9.46,-1.37,0.1,1.8,1.07,0,">1 nonsynonymous","A89R T140K",2
"lib2","SARS-CoV-2","ACTAACCCAATCAAGA",1,37.79,9.1,-1.74,0.06,2.96,1.04,0,">1 nonsynonymous","Y35G T170H K199C",3
"lib2","SARS-CoV-2","ACTAACCCGATAAAAT",2,35.08,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","G101D A145V",2
"lib2","SARS-CoV-2","ACTAACCCTCTCCTTT",7,163.31,10.93,0.09,0.06,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTAACCCTGTGTGGT",2,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R S45L K56P I80K V103D",5
"lib2","SARS-CoV-2","ACTAACCTCCTATATG",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R S184D",2
"lib2","SARS-CoV-2","ACTAACGAACCAGGCG",5,77.8,10.82,-0.01,0.05,2.92,1.09,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","ACTAACGAAGGTATCG",3,15.14,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3S V71S Y121N",3
"lib2","SARS-CoV-2","ACTAACGACACATCAA",4,24.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4V V71E G155W L183H",4
"lib2","SARS-CoV-2","ACTAACGCCTTACCTA",4,76.18,9.62,-1.21,0.06,1.84,1.05,0,">1 nonsynonymous","V37A P82Q",2
"lib2","SARS-CoV-2","ACTAACGCTTTCGAAC",11,226.6,10.11,-0.73,0.07,2.36,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","ACTAACGGGACGTCCA",1,18.76,10.89,0.06,0.08,2.88,1.12,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","ACTAACGTAAGGCCAC",1,21.84,9.14,-1.69,0.12,2.76,1.09,0.01,">1 nonsynonymous","L60N N110T N130K Q176S",4
"lib2","SARS-CoV-2","ACTAACGTCTGCACAT",4,63.35,10.73,-0.11,0.09,2.78,1.15,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","ACTAACTAAATTCTAT",1,32.98,10.35,-0.48,0.06,3,1.03,0,">1 nonsynonymous","V37S P96D",2
"lib2","SARS-CoV-2","ACTAACTACGAATACC",13,100.82,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L60P G86K F134S G152I",4
"lib2","SARS-CoV-2","ACTAACTGAAAAGAGA",24,318.77,9.85,-0.99,0.04,2.36,1.04,0,">1 nonsynonymous","S41L A105I",2
"lib2","SARS-CoV-2","ACTAACTGCAGGGTTA",10,128.53,10.63,-0.21,0.07,2.85,1.08,0,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","ACTAACTGCCTCAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41F R127* E135Y",3
"lib2","SARS-CoV-2","ACTAAGAACATAATTG",1,21.64,9.02,-1.82,0.09,2.95,1.05,0,">1 nonsynonymous","Y143C P197F",2
"lib2","SARS-CoV-2","ACTAAGAAGGACTCTT",6,92.67,10.76,-0.07,0.05,2.87,1.08,0,">1 nonsynonymous","G83L S200T",2
"lib2","SARS-CoV-2","ACTAAGAAGTTACCAA",4,48.84,6,-4.84,2,3,1.11,0,">1 nonsynonymous","Y91T Y119I Y143V",3
"lib2","SARS-CoV-2","ACTAAGAATAAACACT",4,31.77,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A14S P133D L162S",3
"lib2","SARS-CoV-2","ACTAAGAATCTAAACA",5,60.39,10.75,-0.08,0.05,2.95,1.03,0,"1 nonsynonymous","A192V",1
"lib2","SARS-CoV-2","ACTAAGACACGTTAGT",18,208.97,10.56,-0.27,0.05,2.96,1.04,0,">1 nonsynonymous","S43N T55P N110S",3
"lib2","SARS-CoV-2","ACTAAGAGAGCCGTAG",2,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y F44Q V103E G196W",4
"lib2","SARS-CoV-2","ACTAAGATAAAGAGAA",10,167.91,10.01,-0.82,0.08,2.19,1.01,0,">1 nonsynonymous","F8V K128M S164Q",3
"lib2","SARS-CoV-2","ACTAAGATACAGTATC",12,805.7,10.84,0,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTAAGATCAGGAGTG",11,71.34,10.73,-0.11,0.05,2.95,1.06,0,">1 nonsynonymous","T100Y A190F",2
"lib2","SARS-CoV-2","ACTAAGATTAATTATA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","K94A Y121*",2
"lib2","SARS-CoV-2","ACTAAGCAAAGCGATA",8,6.47,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N4P A33D I88L E135M",4
"lib2","SARS-CoV-2","ACTAAGCAATCCGTTC",6,74.33,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K26V S53F C150R",3
"lib2","SARS-CoV-2","ACTAAGCAATTTCTTG",6,134.86,10.06,-0.78,0.05,2.89,1.01,0,">1 nonsynonymous","C6G V37K",2
"lib2","SARS-CoV-2","ACTAAGCAGGTATGCT",2,46.64,9.4,-1.44,0.08,2.77,1.17,0,">1 nonsynonymous","G155C T170Q",2
"lib2","SARS-CoV-2","ACTAAGCATACTTCCG",3,18.81,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L5P R124G",2
"lib2","SARS-CoV-2","ACTAAGCCACACTGGC",6,31.58,10.01,-0.83,0.11,2.22,1,0,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","ACTAAGCCATATCAAG",1,12.45,9.82,-1.02,0.26,1.63,1.07,0.03,"1 nonsynonymous","Y50D",1
"lib2","SARS-CoV-2","ACTAAGCGAACCGCAG",3,22.78,9.25,-1.58,0.14,1.95,1.1,0.01,">1 nonsynonymous","R136A Q144G",2
"lib2","SARS-CoV-2","ACTAAGCGCTACCCTA",2,35,10.26,-0.57,0.05,2.89,1,0,">1 nonsynonymous","R27V P133T",2
"lib2","SARS-CoV-2","ACTAAGCTATGAATAG",4,60.31,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G83C I88L A105T L131R F185V",5
"lib2","SARS-CoV-2","ACTAAGCTTCCCGAAA",3,21.65,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A42S Y93S",2
"lib2","SARS-CoV-2","ACTAAGGAACAAAACA",2,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E T170M R179F",3
"lib2","SARS-CoV-2","ACTAAGGAAGTAAGGA",2,92.72,6,-4.84,1.73,1.5,1.15,0.01,">1 nonsynonymous","K128L Q144F Y175D E186S",4
"lib2","SARS-CoV-2","ACTAAGGAATTTCTGC",9,94.27,9.32,-1.51,0.1,1.89,1.09,0,">1 nonsynonymous","D34E V65Y",2
"lib2","SARS-CoV-2","ACTAAGGAGATCTAAA",3,17.5,10.25,-0.58,0.08,2.97,1,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","ACTAAGGATGCTTCGC",6,21.8,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A33V P133E Q176L T201M",4
"lib2","SARS-CoV-2","ACTAAGGCATGCTTAT",16,105.81,8.7,-2.13,0.07,2.8,1.02,0,">1 nonsynonymous","A22Q K128W T170E",3
"lib2","SARS-CoV-2","ACTAAGGGTGCCACCG",13,303.92,10.74,-0.1,0.03,2.93,1.05,0,">1 nonsynonymous","F62W N120S S139R",3
"lib2","SARS-CoV-2","ACTAAGGGTTGGCATA",15,148.06,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S69V L95P Y121H P169M Y175L",5
"lib2","SARS-CoV-2","ACTAAGGTCAAGGAAA",2,33.85,10.79,-0.05,0.06,2.8,1.21,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","ACTAAGTAAGAAGAAA",16,100.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A22E G83H D90T T100C W106L",5
"lib2","SARS-CoV-2","ACTAAGTAGCTATGAA",2,31.34,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2S G9T Q79H G86M N151L",5
"lib2","SARS-CoV-2","ACTAAGTATTCCTTGT",2,2.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150R",1
"lib2","SARS-CoV-2","ACTAAGTCGTTAATAT",14,109.34,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Y39P N64A L131R",3
"lib2","SARS-CoV-2","ACTAAGTCTTGTGACG",7,123.17,9.84,-1,0.07,2.34,1.07,0,">1 nonsynonymous","R16K D90M F134R V153S",4
"lib2","SARS-CoV-2","ACTAAGTCTTTAAAAA",14,203.9,10.94,0.11,0.06,2.93,1.07,0,">1 nonsynonymous","A33W T201H",2
"lib2","SARS-CoV-2","ACTAAGTTCTCACTTT",2,2.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","ACTAATAAAAGATGTC",3,95.78,10.17,-0.67,0.04,2.95,1,0,">1 nonsynonymous","C6W C61V",2
"lib2","SARS-CoV-2","ACTAATAAATCGATCA",11,55.63,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G86F G116P P197T",3
"lib2","SARS-CoV-2","ACTAATACCAAACAAC",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N R136T T170Y",3
"lib2","SARS-CoV-2","ACTAATACGGCAGAAT",1,20,10.22,-0.61,0.09,2.65,1,0,">1 nonsynonymous","Y66E F160D",2
"lib2","SARS-CoV-2","ACTAATAGAAGGAGTA",8,176.78,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10M C61K Y119L F134S T170S P177R",6
"lib2","SARS-CoV-2","ACTAATAGACCTACAC",3,8.18,10.46,-0.38,0.28,1.9,1,0.03,">1 nonsynonymous","N4L A42L D59I",3
"lib2","SARS-CoV-2","ACTAATAGGAATAAGT",3,36.98,9.61,-1.23,0.03,2.85,1.12,0,">1 nonsynonymous","T3D N157D",2
"lib2","SARS-CoV-2","ACTAATAGGCGAGTCG",7,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R S53T F62L G86C",4
"lib2","SARS-CoV-2","ACTAATAGGTAGCTAT",8,79.64,6.16,-4.68,0.88,1.5,1.27,0.02,">1 nonsynonymous","T15S W106F Q144P E154V G166L",5
"lib2","SARS-CoV-2","ACTAATAGTCCCATAA",1,9.03,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S19E D59V G146T V173T",4
"lib2","SARS-CoV-2","ACTAATATAAATCTTA",6,19.09,6,-4.84,2,3,1.31,0,">1 nonsynonymous","F70I I104S I142F A190S",4
"lib2","SARS-CoV-2","ACTAATATACACCCGT",3,43.98,9.95,-0.89,0.11,2.43,1.03,0,">1 nonsynonymous","A81N K114A",2
"lib2","SARS-CoV-2","ACTAATATACCCACAT",3,63.97,8.25,-2.59,0.24,1.5,1.03,0.02,">1 nonsynonymous","L38H F44L D90S Y143F",4
"lib2","SARS-CoV-2","ACTAATATACTTCATC",4,27.69,6,-4.84,2,1.5,1.27,0.08,">1 nonsynonymous","T15W Y123R C150G",3
"lib2","SARS-CoV-2","ACTAATATTTTTCTAT",3,29.16,8.73,-2.11,0.2,1.5,1.01,0.02,">1 nonsynonymous","S41E P149S G152L Y178S",4
"lib2","SARS-CoV-2","ACTAATCAATTTCAAT",8,35.09,7.25,-3.59,0.4,1.5,1.19,0.04,">1 nonsynonymous","P82N T170F",2
"lib2","SARS-CoV-2","ACTAATCACAACACTT",1,7.2,9.55,-1.29,0.5,1.52,1.02,0.06,">1 nonsynonymous","S36Y G117V",2
"lib2","SARS-CoV-2","ACTAATCAGCATACCC",6,68.2,10.88,0.05,0.03,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAATCATAAATGCA",1,11.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86C D90G Q168K",3
"lib2","SARS-CoV-2","ACTAATCATGAAAGGA",3,33.79,10.81,-0.02,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAATCGAATTTATC",3,56.97,9.86,-0.98,0.06,2.41,1.01,0,">1 nonsynonymous","G9A F47C F134W T140C",4
"lib2","SARS-CoV-2","ACTAATCGACAAACCG",11,162.23,10.84,0,0.05,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTAATCGGTATAGGC",19,472.31,10.24,-0.6,0.03,2.85,1.04,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","ACTAATCGTAAGACTG",4,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R N151S R179W",3
"lib2","SARS-CoV-2","ACTAATCTGGACTCAA",3,19.37,8.34,-2.49,0.18,1.5,1.04,0.02,">1 nonsynonymous","C61F A67F P133H",3
"lib2","SARS-CoV-2","ACTAATCTTGCGAGCC",14,114.67,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","I2Y N13D R127C",3
"lib2","SARS-CoV-2","ACTAATGACAGACCTA",2,94.98,10.89,0.06,0.06,2.99,1.04,0,">1 nonsynonymous","P7D D90R",2
"lib2","SARS-CoV-2","ACTAATGAGCACCGGT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","Y91* G101E",2
"lib2","SARS-CoV-2","ACTAATGATATAAATG",6,16.72,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y21L K87G C158L",3
"lib2","SARS-CoV-2","ACTAATGATGCATAAT",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K D98F L122R P169G",4
"lib2","SARS-CoV-2","ACTAATGCCTAACCTG",3,10.82,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V11C W23A P161W",3
"lib2","SARS-CoV-2","ACTAATGCTCGAACAT",11,113.75,10.83,-0.01,0.03,2.97,1.04,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","ACTAATGCTGTCGAGA",13,172.57,6,-4.84,0.42,1.5,1.09,0,">1 nonsynonymous","F126V E135G N157M",3
"lib2","SARS-CoV-2","ACTAATGCTGTTTGCT",19,214.22,9.98,-0.86,0.05,2.75,1.05,0,">1 nonsynonymous","C6V T55S K132S",3
"lib2","SARS-CoV-2","ACTAATGGCCAAGTGA",6,9.93,NA,NA,NA,NA,NA,NA,"stop","S29* Y50E D90L N109L",4
"lib2","SARS-CoV-2","ACTAATGGTGACGAGT",3,49.51,10.54,-0.3,0.06,2.97,1.04,0,">1 nonsynonymous","L38F K56L F160S",3
"lib2","SARS-CoV-2","ACTAATGTAAATACTA",1,22.49,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9T G51W G146L K199Q",4
"lib2","SARS-CoV-2","ACTAATGTAATATCCG",2,25.72,10.15,-0.68,0.07,2.84,1.07,0,"1 nonsynonymous","Y35E",1
"lib2","SARS-CoV-2","ACTAATGTGACTGAAT",1,6.59,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","N4A V11R R27A D137H G146L G155F V182T",7
"lib2","SARS-CoV-2","ACTAATTAAAATTTTA",30,44.07,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9V A14G C61R D97Y I104S K114R E135G",7
"lib2","SARS-CoV-2","ACTAATTCCTAGATTG",2,29.27,10.77,-0.07,0.08,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAATTTAAGCATAC",9,3.48,NA,NA,NA,NA,NA,NA,"stop","E10R Y39* Y93D N157K",4
"lib2","SARS-CoV-2","ACTAATTTAGTTGAAA",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72F G155A",2
"lib2","SARS-CoV-2","ACTACAAAAAACGACA",8,47.76,6,-4.84,2,3,1.22,0,">1 nonsynonymous","D59L N92S A105H T201C",4
"lib2","SARS-CoV-2","ACTACAAAAATTCTAA",1,8.52,10.94,0.11,0.09,3,1.01,0,">1 nonsynonymous","Y39L K114R",2
"lib2","SARS-CoV-2","ACTACAAAACCCGCAT",3,38.29,7.64,-3.2,0.33,1.5,1.15,0.03,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","ACTACAAACAAACAGG",1,78.35,9.47,-1.36,0.06,2.84,1.13,0,">1 nonsynonymous","S113C T148A P169R T201V",4
"lib2","SARS-CoV-2","ACTACAAACCCTTACC",4,1.09,NA,NA,NA,NA,NA,NA,"stop","N4* A105C T170A",3
"lib2","SARS-CoV-2","ACTACAAAGCGACTAG",4,12.27,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","K56T K94D I138R Q168M",4
"lib2","SARS-CoV-2","ACTACAAAGGGGGAGA",7,112.21,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G86F D98G Y123V",3
"lib2","SARS-CoV-2","ACTACAACAAGTATAG",9,208.65,10.79,-0.05,0.06,2.87,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTACAAGAAAACGCC",4,27.04,10.45,-0.38,0.05,2.97,1.04,0,">1 nonsynonymous","E10Y P197M",2
"lib2","SARS-CoV-2","ACTACAAGAGGATTAT",7,58.15,6.18,-4.65,0.72,1.5,1.22,0.01,">1 nonsynonymous","F12S G86V P149Q",3
"lib2","SARS-CoV-2","ACTACAAGATACGACA",1,11.71,10.52,-0.32,0.11,2.9,1.05,0,">1 nonsynonymous","A89S K198W",2
"lib2","SARS-CoV-2","ACTACAAGGTATTGTT",3,41.29,9.55,-1.29,0.06,2.91,1.06,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","ACTACAAGTGCTGCGA",3,58.34,10.96,0.12,0.06,2.88,1.1,0,"1 nonsynonymous","T55E",1
"lib2","SARS-CoV-2","ACTACAATACTCCGGT",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N G83A L95T G146Y",4
"lib2","SARS-CoV-2","ACTACAATATACATAG",1,43.02,6.6,-4.24,0.55,1.5,1.19,0.05,">1 nonsynonymous","P96D S113N G166A",3
"lib2","SARS-CoV-2","ACTACAATCAAACTCA",3,3.23,NA,NA,NA,NA,NA,NA,"stop","D34L D59L G83R K87* Y143L K198S",6
"lib2","SARS-CoV-2","ACTACAATCCTTGACT",7,68.97,10.69,-0.15,0.04,3,1.02,0,">1 nonsynonymous","N40D C61L",2
"lib2","SARS-CoV-2","ACTACACACCTTATGA",1,6.65,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F99H Y175K",2
"lib2","SARS-CoV-2","ACTACACATTATCACG",3,16.17,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","N13L C61T G86V T100P P149H G174L",6
"lib2","SARS-CoV-2","ACTACACCATAAAGAA",9,171.13,9.21,-1.62,0.03,2.86,1.15,0,">1 nonsynonymous","F156E T201P",2
"lib2","SARS-CoV-2","ACTACACGAATCTAAT",8,36.49,10.82,-0.02,0.07,3,1,0,">1 nonsynonymous","N4P V153I K198G",3
"lib2","SARS-CoV-2","ACTACACGACGAAAAA",2,2.89,NA,NA,NA,NA,NA,NA,"stop","D97* P197K",2
"lib2","SARS-CoV-2","ACTACACTATTATCGG",1,31.87,10.6,-0.23,0.05,2.95,1.03,0,"1 nonsynonymous","D98W",1
"lib2","SARS-CoV-2","ACTACACTGCACATAG",5,13.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106N N120S F160R",3
"lib2","SARS-CoV-2","ACTACACTGTGGCAAG",13,282.6,10.78,-0.06,0.04,2.91,1.11,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","ACTACACTTACTATCA",1,54.78,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S36P S41A N107Y E141L",4
"lib2","SARS-CoV-2","ACTACACTTGTTAAAT",2,33.64,10.72,-0.12,0.05,2.91,1.12,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","ACTACAGACAAAATTG",10,70.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K114A R136N G146L",3
"lib2","SARS-CoV-2","ACTACAGGATTTAACC",2,87.4,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y35I P161V Q176R",3
"lib2","SARS-CoV-2","ACTACAGGTTCGATAA",6,68.43,6,-4.84,1.19,1.5,1.2,0.02,">1 nonsynonymous","N64G I88Q S139T",3
"lib2","SARS-CoV-2","ACTACAGTAGGTCCAA",2,23.26,9.99,-0.85,0.12,2.52,1,0.01,"1 nonsynonymous","A81I",1
"lib2","SARS-CoV-2","ACTACATACTACCACG",5,47.46,9.66,-1.17,0.11,1.92,1.08,0.01,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","ACTACATATATCTTAG",1,8.36,9.21,-1.63,0.07,3,1.05,0,">1 nonsynonymous","S53E Y119E",2
"lib2","SARS-CoV-2","ACTACATATTTAATGT",7,25.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F47W K94A N107L C158F",4
"lib2","SARS-CoV-2","ACTACATCTAAAACCG",1,15.32,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","G101R W106S K128I Y165M",4
"lib2","SARS-CoV-2","ACTACATCTTCAAATT",2,29.26,10.91,0.07,0.09,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTACATGCCATACTG",6,1.39,NA,NA,NA,NA,NA,NA,"stop","T15F P54S A81* D98V Q144I",5
"lib2","SARS-CoV-2","ACTACATGCGCAAAAG",2,1.75,NA,NA,NA,NA,NA,NA,"stop","N4S P54T G83C I104* T148K T201M",6
"lib2","SARS-CoV-2","ACTACATGGCAATTAT",17,111.34,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N107L F134L P161L",3
"lib2","SARS-CoV-2","ACTACATTCTTACGTC",7,79.47,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R25W T55N D98R",3
"lib2","SARS-CoV-2","ACTACATTGCACCTAT",3,19.35,9.06,-1.78,0.19,1.5,1.13,0.02,">1 nonsynonymous","F99L G152V",2
"lib2","SARS-CoV-2","ACTACCAAAGCACGTG",1,14.18,10.04,-0.79,0.09,2.86,1.06,0,">1 nonsynonymous","T15N N24G",2
"lib2","SARS-CoV-2","ACTACCAAATACTAAG",2,17.72,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C6V R25N V52F L60S E186Y",5
"lib2","SARS-CoV-2","ACTACCAAATGTCGCA",5,45.96,8.22,-2.62,0.16,1.5,1.11,0.01,">1 nonsynonymous","P7F N24Q C49W K114F T140I",5
"lib2","SARS-CoV-2","ACTACCAAGGATATCT",1,30.55,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","A18E A42E P177F",3
"lib2","SARS-CoV-2","ACTACCACCTTCCGAC",4,45.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56P G101A",2
"lib2","SARS-CoV-2","ACTACCACGCCGTTTA",1,42.88,10.84,0.01,0.06,2.99,1.03,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","ACTACCACTATATGTT",2,45.82,10.78,-0.05,0.06,3,1.03,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","ACTACCAGATGTACCA",1,47.84,7.94,-2.9,0.19,2.26,1.12,0.02,">1 nonsynonymous","P54K C150N",2
"lib2","SARS-CoV-2","ACTACCAGGCAAATAT",4,44.11,6,-4.84,1.23,1.5,1.12,0.02,">1 nonsynonymous","N40D F99S K114L Y121N",4
"lib2","SARS-CoV-2","ACTACCAGTGTGCTAT",1,31.76,10.81,-0.03,0.07,2.91,1.05,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","ACTACCATGATTACGG",2,46.74,10.76,-0.07,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTACCATTGAGTGCT",3,63.89,7.85,-2.98,0.23,1.5,1.2,0.02,">1 nonsynonymous","K56L G86A K114N",3
"lib2","SARS-CoV-2","ACTACCCACCGACATT",6,5.44,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","T15S T63P I72K D98S N151T",5
"lib2","SARS-CoV-2","ACTACCCAGACAAGGA",2,67.67,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","D68I S129L Y178A H189F",4
"lib2","SARS-CoV-2","ACTACCCCGCGAATCA",8,0.43,NA,NA,NA,NA,NA,NA,"stop","N4K F99I N107* S139F F167A",5
"lib2","SARS-CoV-2","ACTACCCCTTCCGATG",12,187.24,9.3,-1.54,0.05,1.83,1.12,0,">1 nonsynonymous","F12M L38K",2
"lib2","SARS-CoV-2","ACTACCCGGCTGCCAC",5,70.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y39K L60T P82M Y93V A105L",5
"lib2","SARS-CoV-2","ACTACCCGTACCGGCC",18,204.17,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","F44V P161R",2
"lib2","SARS-CoV-2","ACTACCCGTTAGTCCA",10,1.41,NA,NA,NA,NA,NA,NA,"stop","S147*",1
"lib2","SARS-CoV-2","ACTACCGAAGTACCCC",1,26.04,6,-4.84,1.54,1.5,1.04,0.01,">1 nonsynonymous","G9K Y119L F167V",3
"lib2","SARS-CoV-2","ACTACCGAATTTTAAC",9,134.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82D Y121F G174E",3
"lib2","SARS-CoV-2","ACTACCGACGTAGTAG",1,10.39,10.95,0.11,0.12,3,1.04,0,">1 nonsynonymous","L95W I104K S139Y",3
"lib2","SARS-CoV-2","ACTACCGCTGCCAACT",3,1.1,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","ACTACCGGAGATCAAT",1,6.73,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K56F F70V A81G A105I Y119V E141W",6
"lib2","SARS-CoV-2","ACTACCGGCTACTGCA",11,114.73,10.39,-0.45,0.03,2.85,1.08,0,"1 nonsynonymous","E135N",1
"lib2","SARS-CoV-2","ACTACCGTATCAGGCC",9,263.03,10.23,-0.61,0.03,2.8,1.08,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","ACTACCGTGATGAGGT",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N Y123W Q144F N171M",4
"lib2","SARS-CoV-2","ACTACCTCAAGCAAAT",3,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S F99K T170L",3
"lib2","SARS-CoV-2","ACTACCTGAAGACTTA",3,29.57,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I88G R127C K199L",3
"lib2","SARS-CoV-2","ACTACCTGCTCGTTAT",3,16.72,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","K26W G101S G146A",3
"lib2","SARS-CoV-2","ACTACCTGGAAGTAAA",3,33.82,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","N30A S43Y K48R D97F K128W G172F",6
"lib2","SARS-CoV-2","ACTACCTTCGGAGATT",1,106.45,8.54,-2.29,0.06,2.89,1.07,0,">1 nonsynonymous","N4T T85V Y119D N151V L187Y",5
"lib2","SARS-CoV-2","ACTACCTTGAGTGTAA",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S V77G N120I",3
"lib2","SARS-CoV-2","ACTACGAAAGCAGACG",3,74.66,10.81,-0.03,0.05,2.96,1.06,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","ACTACGAGAATCATTT",2,13.9,6,-4.84,2,1.5,1.29,0.08,">1 nonsynonymous","A105F V181R",2
"lib2","SARS-CoV-2","ACTACGATACAGGAAG",2,56.81,6,-4.84,2,3,1.2,0,">1 nonsynonymous","G9E R27P F70W D90N L111A",5
"lib2","SARS-CoV-2","ACTACGATTGTAGAGC",9,105.18,10.78,-0.05,0.04,2.96,1.05,0,">1 nonsynonymous","Q163R T201G",2
"lib2","SARS-CoV-2","ACTACGCACCTCCTAC",11,147.76,10.79,-0.05,0.04,2.94,1.07,0,">1 nonsynonymous","N1R K56T",2
"lib2","SARS-CoV-2","ACTACGCGTTCGACAA",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T P82L K94N G116N Y123L V173I",6
"lib2","SARS-CoV-2","ACTACGGCCCCATTAG",3,58.39,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T63Y L95S S129G",3
"lib2","SARS-CoV-2","ACTACGGCGAACAAAG",8,133.39,9.72,-1.11,0.08,2.8,1.09,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","ACTACGTACGATATGT",1,9.69,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L95R K114V L122K",3
"lib2","SARS-CoV-2","ACTACGTAGAAATATT",7,3.47,NA,NA,NA,NA,NA,NA,"stop","V11I T15Q T55S I88V D98M C150V L162R T170*",8
"lib2","SARS-CoV-2","ACTACGTGAATTTGGA",3,40.53,10.7,-0.13,0.03,3,1.03,0,"1 nonsynonymous","A42V",1
"lib2","SARS-CoV-2","ACTACGTGCCGCTCCT",2,2.39,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","ACTACTAAAACAAACA",3,9.54,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F134I L162S",2
"lib2","SARS-CoV-2","ACTACTAAGCCGTAAC",14,310.41,9.56,-1.28,0.08,1.64,1.09,0,">1 nonsynonymous","N40L K56Y N64S Y123L",4
"lib2","SARS-CoV-2","ACTACTAGAAGATTAT",3,29.87,9.97,-0.86,0.13,2.2,1.02,0.01,">1 nonsynonymous","F17P L60Y G116T S129T S164R",5
"lib2","SARS-CoV-2","ACTACTATAATCAGAA",2,35.91,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10M V37T Y50Q",3
"lib2","SARS-CoV-2","ACTACTATAGTCGAGT",2,17.88,6.41,-4.43,0.32,1.87,1.09,0.01,">1 nonsynonymous","N118W T170L",2
"lib2","SARS-CoV-2","ACTACTATATGACACA",7,63.98,6,-4.84,1.45,1.5,1.1,0.01,">1 nonsynonymous","T3W F12A S19F R27T G51R Y66I D98F T140I F167G",9
"lib2","SARS-CoV-2","ACTACTATCGACGACG",10,0.57,NA,NA,NA,NA,NA,NA,"stop","N4V P7H N92F N120* S129R D137K C158A",7
"lib2","SARS-CoV-2","ACTACTATTAAACAAC",13,51.03,6.19,-4.64,0.57,1.5,1.13,0.01,">1 nonsynonymous","T100S R127P",2
"lib2","SARS-CoV-2","ACTACTATTCATTGCA",18,76.99,6.22,-4.62,0.54,1.5,1.18,0.01,">1 nonsynonymous","L95P G146D T201L",3
"lib2","SARS-CoV-2","ACTACTCATTATGCTA",5,65.37,10.86,0.03,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTACTCGAACTTAAC",4,58.07,9.23,-1.61,0.15,1.8,1.1,0.01,">1 nonsynonymous","N64L P96S I104A L188W",4
"lib2","SARS-CoV-2","ACTACTCGAATTAGAT",8,0.1,NA,NA,NA,NA,NA,NA,"stop","A14Y D90* Y178G C195F",4
"lib2","SARS-CoV-2","ACTACTGAATAATTTC",6,41.4,9.05,-1.78,0.17,1.79,1.24,0.01,">1 nonsynonymous","N13Y D98T K128M G196K",4
"lib2","SARS-CoV-2","ACTACTGACAAATTAT",6,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D S41F N171I R179P",4
"lib2","SARS-CoV-2","ACTACTGGAACAATAA",7,118.3,8.24,-2.6,0.13,1.5,1.05,0.01,">1 nonsynonymous","S29Y Y35P L57R G83K Q163R V173Y",6
"lib2","SARS-CoV-2","ACTACTGTCAGGCACC",1,107.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37D T170R P177T",3
"lib2","SARS-CoV-2","ACTACTGTCTGTATTG",4,89.34,10.61,-0.23,0.03,2.93,1.06,0,"1 nonsynonymous","S36Y",1
"lib2","SARS-CoV-2","ACTACTGTTCGCGTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","ACTACTTAGCCATAAA",6,18.87,9.46,-1.38,0.21,1.91,1.05,0.02,">1 nonsynonymous","E10S S43V W106L",3
"lib2","SARS-CoV-2","ACTACTTGGTCCCCCA",12,55.91,6.54,-4.3,0.75,1.5,1.11,0.05,">1 nonsynonymous","D59Q A81L D112W Y119D",4
"lib2","SARS-CoV-2","ACTACTTGTTTCTAAT",3,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K Y66I T85K P96F",4
"lib2","SARS-CoV-2","ACTAGAAACTTGGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L D59A Y66F L162M V173I",5
"lib2","SARS-CoV-2","ACTAGAAATCTATAGT",6,1.8,NA,NA,NA,NA,NA,NA,"stop","P133E V153*",2
"lib2","SARS-CoV-2","ACTAGAACCACAGTTA",5,24.28,7.66,-3.17,0.31,1.5,1.19,0.03,">1 nonsynonymous","S41T A89L",2
"lib2","SARS-CoV-2","ACTAGAACGAGCTCTG",6,12.17,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N40C Y50A L95A Y165I G172W F185S",6
"lib2","SARS-CoV-2","ACTAGAAGAATAACAC",18,177.45,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","Y39S S45D V52G F70K F156K",5
"lib2","SARS-CoV-2","ACTAGAAGATGGGCGA",7,199.63,10.78,-0.05,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGAATAAATAGCC",1,13.44,10.18,-0.65,0.18,1.87,1.04,0.01,">1 nonsynonymous","D90R R127H",2
"lib2","SARS-CoV-2","ACTAGAATAAGAATTT",3,8.3,NA,NA,NA,NA,NA,0.39,"1 nonsynonymous","P82F",1
"lib2","SARS-CoV-2","ACTAGAATATGCGCGG",5,11.68,8.09,-2.75,0.31,1.5,1.33,0.03,">1 nonsynonymous","P7N A14C S41C T100D",4
"lib2","SARS-CoV-2","ACTAGAATATTATCGG",12,81.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S69V G101T",2
"lib2","SARS-CoV-2","ACTAGAATGGTGAACT",9,64.79,10.78,-0.05,0.06,2.83,1.18,0,">1 nonsynonymous","L5M D98S",2
"lib2","SARS-CoV-2","ACTAGAATTTACGTAT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","G9* C61N",2
"lib2","SARS-CoV-2","ACTAGAATTTGTAAAA",6,101.47,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N24Y P82L F156T",3
"lib2","SARS-CoV-2","ACTAGACACTATGCAC",13,16.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13P V103E G196R",3
"lib2","SARS-CoV-2","ACTAGACAGCACAGAT",7,1.66,NA,NA,NA,NA,NA,NA,"stop","R16I S36* S41Q L125M S129I",5
"lib2","SARS-CoV-2","ACTAGACCAAAAATCA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","A14* C31S A89I L95W",4
"lib2","SARS-CoV-2","ACTAGACCTACGATAC",7,62.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P54R C158F F167G",3
"lib2","SARS-CoV-2","ACTAGACGACATGATT",3,30.52,6.67,-4.17,0.22,1.5,1.13,0.01,">1 nonsynonymous","S41V G51N N157P",3
"lib2","SARS-CoV-2","ACTAGACTACGGTGGA",4,27.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11N F47Y D112A R127E Y143S",5
"lib2","SARS-CoV-2","ACTAGACTGTCCGCCT",3,0.63,NA,NA,NA,NA,NA,NA,"stop","I2Q R27* V37D T63G F99W",5
"lib2","SARS-CoV-2","ACTAGACTGTTCAGGA",6,110.82,8.43,-2.41,0.12,3,1.11,0.01,">1 nonsynonymous","N24D Y159V",2
"lib2","SARS-CoV-2","ACTAGACTTACAAGAT",3,1.15,NA,NA,NA,NA,NA,NA,"stop","N4K G101V A105C Y165* Q176K",5
"lib2","SARS-CoV-2","ACTAGAGACTTACCCA",2,16.05,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T15N L60F L95Q F134T",4
"lib2","SARS-CoV-2","ACTAGAGAGACCAACA",4,31.96,11.02,0.18,0.07,2.97,1.04,0,"1 nonsynonymous","N64S",1
"lib2","SARS-CoV-2","ACTAGAGCAAATGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y T100S",2
"lib2","SARS-CoV-2","ACTAGAGCTACCGAAT",12,109.39,10.02,-0.81,0.07,2.19,1.03,0,">1 nonsynonymous","W23H Q163G",2
"lib2","SARS-CoV-2","ACTAGAGTACAGCAAT",10,4.03,NA,NA,NA,NA,NA,NA,"stop","G51D F62L I72* G83D Q144A C158*",6
"lib2","SARS-CoV-2","ACTAGAGTTCTTTGCC",1,12.45,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","R25A F47D Y121N Y159T",4
"lib2","SARS-CoV-2","ACTAGAGTTTAAAGGC",9,56.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A33C C61S E135W P169T L183W",5
"lib2","SARS-CoV-2","ACTAGATAAATTTGTG",6,3.16,NA,NA,NA,NA,NA,NA,"stop","A14S F99N F156S Q176*",4
"lib2","SARS-CoV-2","ACTAGATACCACCAAT",6,63.75,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T3G Y39P A81L D98L I142M P197N",6
"lib2","SARS-CoV-2","ACTAGATACTCATACC",1,8.68,6.4,-4.44,0.77,1.5,1.07,0.06,">1 nonsynonymous","T15V F47Y V52S L60I Y91P P149N Y178L P197A",8
"lib2","SARS-CoV-2","ACTAGATAGTGCATAA",3,76.79,10.68,-0.16,0.11,2.41,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGATCAAGGCAAT",4,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L L95R L125N V153S Y165N",5
"lib2","SARS-CoV-2","ACTAGATCATAGATCC",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R Y123W",2
"lib2","SARS-CoV-2","ACTAGATGATTCGTAA",3,51.12,10.77,-0.06,0.04,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGATTGGACATAA",5,51.1,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V20M A42W K48L T140L G174T",5
"lib2","SARS-CoV-2","ACTAGATTGTTGCCCG",3,94.13,10.81,-0.02,0.05,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGCAAAATACCAA",15,128.64,6,-4.84,1.8,1.5,1.23,0.01,">1 nonsynonymous","K48R F99A P149R",3
"lib2","SARS-CoV-2","ACTAGCAAGTAGCAAA",6,25.63,8.77,-2.06,0.29,1.5,1.09,0.04,">1 nonsynonymous","C6T I28E I138E",3
"lib2","SARS-CoV-2","ACTAGCAAGTTAAATT",4,54.18,10.84,0.01,0.06,3,1.02,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","ACTAGCACCCAATCAA",9,88.77,9.83,-1.01,0.08,2.36,1.06,0,">1 nonsynonymous","S19A L60P D98N",3
"lib2","SARS-CoV-2","ACTAGCACGGTATCTT",4,64.25,8.93,-1.91,0.09,1.72,1.08,0,"1 nonsynonymous","S19Y",1
"lib2","SARS-CoV-2","ACTAGCACGGTGCACA",5,87.2,10.81,-0.02,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGCAGCTTCATCC",9,128.41,10.81,-0.03,0.06,2.85,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGCATGAAAATCC",5,12.67,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","D90V R127L V153M Q168K",4
"lib2","SARS-CoV-2","ACTAGCATTGATTTCG",5,59,6,-4.84,2,1.5,1.21,0.03,"1 nonsynonymous","G101I",1
"lib2","SARS-CoV-2","ACTAGCCAGCCCTACA",4,19.18,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D90S V103T C150S L187F",4
"lib2","SARS-CoV-2","ACTAGCCATGACATAT",2,47.93,10.76,-0.07,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGCCCCAACTCAC",2,58.27,10.34,-0.5,0.03,2.86,1.12,0,">1 nonsynonymous","K48A K56T I138S",3
"lib2","SARS-CoV-2","ACTAGCCCGATGTTTA",6,23.98,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S41A V103S",2
"lib2","SARS-CoV-2","ACTAGCCGGATCCTAA",4,73.08,9.65,-1.19,0.09,2.4,1,0,">1 nonsynonymous","Y91T S147I P197T",3
"lib2","SARS-CoV-2","ACTAGCCTAACAACCG",16,264.12,10.86,0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGCCTCCAGATAA",4,115.92,6,-4.84,1.28,1.5,1.18,0.01,">1 nonsynonymous","R25G N64R D90E F160W S184I",5
"lib2","SARS-CoV-2","ACTAGCCTGGCATCTT",4,37.41,9.76,-1.07,0.09,2.11,1.05,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","ACTAGCGAGGCTTGCT",9,112.69,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G51D S69R A89E Y143Q",4
"lib2","SARS-CoV-2","ACTAGCGCCCATGACG",2,45.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5R Y50L G83P D97K R127A I142M S164Y Y178S H189Y",9
"lib2","SARS-CoV-2","ACTAGCGGGTGCTGCG",1,6.8,10.37,-0.47,0.35,1.9,1,0.03,">1 nonsynonymous","C102M T140I",2
"lib2","SARS-CoV-2","ACTAGCTAAATAAAAA",8,50.47,8.64,-2.2,0.09,2.09,1.07,0,">1 nonsynonymous","T15Y R73S I80V N110R",4
"lib2","SARS-CoV-2","ACTAGCTAACTGTTTT",5,18.12,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C61S A67D P96Q A105N N151F",5
"lib2","SARS-CoV-2","ACTAGCTACAAATATA",5,81.53,9.53,-1.31,0.05,2.36,1.05,0,">1 nonsynonymous","V11L I28L C61Y V153C Y178N K199I",6
"lib2","SARS-CoV-2","ACTAGCTACGGACAAA",5,35.97,10.26,-0.57,0.05,2.89,1.09,0,">1 nonsynonymous","N4Y T55N K87A",3
"lib2","SARS-CoV-2","ACTAGCTACTGCTGAA",16,173.18,10.76,-0.08,0.03,3,1.02,0,">1 nonsynonymous","K48R D59M",2
"lib2","SARS-CoV-2","ACTAGCTGAAAAAAGG",2,15.14,6,-4.84,2,3,1.18,0,">1 nonsynonymous","W106S P177T A190R",3
"lib2","SARS-CoV-2","ACTAGGACAGCCTACT",6,192.29,9.17,-1.67,0.03,2.93,1.08,0,">1 nonsynonymous","S36D Y119C",2
"lib2","SARS-CoV-2","ACTAGGATACTAAAAA",1,7.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGGATCTGGGTGC",3,14.07,6.04,-4.8,1.18,1.5,1.16,0.02,">1 nonsynonymous","A18S L95P D97V",3
"lib2","SARS-CoV-2","ACTAGGCAGATTTAGT",9,140.18,8.95,-1.89,0.06,2.05,1.12,0,">1 nonsynonymous","T63L G83D D97W K128E F156L",5
"lib2","SARS-CoV-2","ACTAGGCATATGGACA",1,2.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","ACTAGGCCAAATCCAA",5,142.56,10.13,-0.7,0.04,2.65,1.03,0,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","ACTAGGCTCGATAAAC",5,28.24,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F62N A67S C158V",3
"lib2","SARS-CoV-2","ACTAGGGATAATTAAA",6,149.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5Q I28F P177Y",3
"lib2","SARS-CoV-2","ACTAGGGTTACAGCGG",6,37.86,7.73,-3.11,0.36,1.5,1.11,0.06,">1 nonsynonymous","I2Q D90V K132L Y178S",4
"lib2","SARS-CoV-2","ACTAGGTAACTAAATG",1,16.32,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","I80T F99L Q176V",3
"lib2","SARS-CoV-2","ACTAGGTATAAAGGAA",1,58.98,10.83,0,0.05,3,1.03,0,">1 nonsynonymous","L122V A190P",2
"lib2","SARS-CoV-2","ACTAGGTCGCTTTACC",3,9.2,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D34S F47Y K56W V77E K94Q",5
"lib2","SARS-CoV-2","ACTAGGTTCACGTGAA",4,30.88,6.3,-4.54,0.55,1.9,1.18,0.02,">1 nonsynonymous","K48C Y66I W106C",3
"lib2","SARS-CoV-2","ACTAGTAACTATCACA",3,41.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19K V37N D59N I88R F99W",5
"lib2","SARS-CoV-2","ACTAGTACAAAACCAC",2,77.73,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R78G S113P E135K Q176R",4
"lib2","SARS-CoV-2","ACTAGTACCCTTAACT",3,61.37,9.31,-1.53,0.04,2.92,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ACTAGTAGTTAGCAAC",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Y D112L Y119R R127S V173I",5
"lib2","SARS-CoV-2","ACTAGTATTTATCGTG",2,16.05,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K26L L57Y R124T",3
"lib2","SARS-CoV-2","ACTAGTCAAGTAATCA",10,92.42,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S53Q D68I Y119F",3
"lib2","SARS-CoV-2","ACTAGTCACATACTTA",1,0.85,NA,NA,NA,NA,NA,NA,"stop","P82Q I88G G116E K199*",4
"lib2","SARS-CoV-2","ACTAGTCCACGAATTT",9,7.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36Y E76K S164A",3
"lib2","SARS-CoV-2","ACTAGTCCGCTGTTCT",2,22.7,8.34,-2.49,0.16,1.5,1.16,0.02,">1 nonsynonymous","S19K S53A I104M L125F",4
"lib2","SARS-CoV-2","ACTAGTCCGGAAGTCA",4,0,NA,NA,NA,NA,NA,NA,"stop","R27T G83S L95* F156Y",4
"lib2","SARS-CoV-2","ACTAGTCCGTATAAGG",3,48.73,10.73,-0.11,0.05,2.91,1.1,0,">1 nonsynonymous","C61V T148V",2
"lib2","SARS-CoV-2","ACTAGTCGAGTTACCA",3,54.96,8,-2.84,0.27,1.77,1.2,0.02,">1 nonsynonymous","N107T Q176L",2
"lib2","SARS-CoV-2","ACTAGTCGCTTATTAT",18,4.51,NA,NA,NA,NA,NA,NA,"stop","S41* P54S G166A",3
"lib2","SARS-CoV-2","ACTAGTCTAAAAAACC",7,487.19,10.79,-0.04,0.03,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTAGTCTATAGCCAA",1,29.6,10.76,-0.08,0.08,2.92,1,0,">1 nonsynonymous","N120G T201N",2
"lib2","SARS-CoV-2","ACTAGTCTTAAGGTAT",1,6.34,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S29T C49G",2
"lib2","SARS-CoV-2","ACTAGTGAATATAAAT",4,258.2,10.53,-0.31,0.04,2.94,1.03,0,">1 nonsynonymous","T46S E141M",2
"lib2","SARS-CoV-2","ACTAGTGAATCTTCCC",1,0.19,NA,NA,NA,NA,NA,NA,"stop","T55* A89Y D137C T201K",4
"lib2","SARS-CoV-2","ACTAGTGATACACTAC",3,139.5,7.04,-3.8,0.13,1.5,1.09,0,">1 nonsynonymous","T55I Y143T Q168D",3
"lib2","SARS-CoV-2","ACTAGTGATCCGAGTT",9,173.31,9.13,-1.7,0.04,2.91,1.11,0,">1 nonsynonymous","Y119V V153D",2
"lib2","SARS-CoV-2","ACTAGTGGACAGCAAG",5,57.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L P161N T170S",3
"lib2","SARS-CoV-2","ACTAGTGGTGAGATAA",3,26.89,10.33,-0.51,0.15,2.15,1.1,0.01,">1 nonsynonymous","V71L D98R",2
"lib2","SARS-CoV-2","ACTAGTTAAATGAAAC",9,94.01,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P82A Q176S",2
"lib2","SARS-CoV-2","ACTAGTTACTGAGGAT",4,90.13,8.66,-2.18,0.12,1.53,1.11,0.01,">1 nonsynonymous","F12V N107T",2
"lib2","SARS-CoV-2","ACTAGTTATAGTCGTA",9,152.32,10.79,-0.05,0.05,2.96,1.05,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","ACTAGTTATTAGATAC",10,107.21,10.11,-0.72,0.04,2.62,1.04,0,">1 nonsynonymous","D98L Y121Q",2
"lib2","SARS-CoV-2","ACTAGTTCACGGAACG",5,41.05,6.36,-4.47,0.49,1.54,1.17,0.01,">1 nonsynonymous","S19T D97S P133M E141C",4
"lib2","SARS-CoV-2","ACTAGTTCTAATAGAA",5,106.15,10.64,-0.2,0.05,2.94,1.06,0,"1 nonsynonymous","S184M",1
"lib2","SARS-CoV-2","ACTAGTTTACTGCTAA",1,7.99,7.11,-3.72,0.64,1.5,1,0.07,">1 nonsynonymous","I2C F17Q R124S",3
"lib2","SARS-CoV-2","ACTATAAAAAAATTCA",5,26.13,6.21,-4.63,0.6,1.5,1.14,0.02,">1 nonsynonymous","L57V K87E N107G",3
"lib2","SARS-CoV-2","ACTATAAAACTTTAAC",6,0.97,NA,NA,NA,NA,NA,NA,"stop","C49F D68* Q84* Y178I",4
"lib2","SARS-CoV-2","ACTATAAAAGAACCCT",4,40.58,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K56R G86C D98N G172E",4
"lib2","SARS-CoV-2","ACTATAAAATGAGCTA",1,18.71,10.63,-0.21,0.06,3,1.04,0,">1 nonsynonymous","T46K T148K",2
"lib2","SARS-CoV-2","ACTATAAACAATACTA",6,77.89,10.76,-0.08,0.03,2.98,1.04,0,"1 nonsynonymous","T148V",1
"lib2","SARS-CoV-2","ACTATAAAGTCTGCAT",3,74.32,10.84,0,0.06,2.98,1.04,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","ACTATAAAGTGAGTTG",14,249.21,10.72,-0.11,0.04,2.9,1.1,0,">1 nonsynonymous","P54Y D97L",2
"lib2","SARS-CoV-2","ACTATAAAGTTACCGG",4,24.03,9.07,-1.76,0.15,1.5,1.1,0.01,">1 nonsynonymous","S29M K56G L131F",3
"lib2","SARS-CoV-2","ACTATAAATAAAACAC",11,146.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F99M Y119M Y159K",3
"lib2","SARS-CoV-2","ACTATAAATAGACAAC",1,65.33,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3S Q79A D137E G155R T201Q",5
"lib2","SARS-CoV-2","ACTATAAATTATAGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","ACTATAACACCTGCCA",3,38.69,9.51,-1.32,0.05,2.92,1.07,0,">1 nonsynonymous","I2P Y66L Y119F S129N",4
"lib2","SARS-CoV-2","ACTATAACCACATCAA",1,48.73,10.81,-0.03,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATAACCAGGACAA",14,182.43,10.83,0,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATAACGGTGCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","ACTATAACTAAGTTCA",4,30.97,8.47,-2.37,0.16,1.68,1.12,0.01,">1 nonsynonymous","E10S A105M E141L",3
"lib2","SARS-CoV-2","ACTATAAGATGCTATA",3,34.82,7.76,-3.08,0.3,1.5,1.04,0.03,">1 nonsynonymous","A18V S113Q",2
"lib2","SARS-CoV-2","ACTATAAGCACATTTG",6,154.05,9.9,-0.94,0.05,2.36,1.07,0,">1 nonsynonymous","L5F N13S K26V G83A",4
"lib2","SARS-CoV-2","ACTATAAGGACATATT",9,42.23,10.84,0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATAAGGGTTATCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76F L111S",2
"lib2","SARS-CoV-2","ACTATAAGTTAATTTA",3,9.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127T P149E V153G",3
"lib2","SARS-CoV-2","ACTATAATAAACTGTA",4,40.8,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6A K94E L125S Q176W",4
"lib2","SARS-CoV-2","ACTATAATACCCATAC",6,4.09,NA,NA,NA,NA,NA,NA,"stop","R16G A105F K114* Q168P",4
"lib2","SARS-CoV-2","ACTATAATCCTCTAAC",7,25.4,8.68,-2.15,0.17,1.5,1.11,0.02,">1 nonsynonymous","A33R T63A G83V T201S",4
"lib2","SARS-CoV-2","ACTATACACATTATCC",7,25.79,8.71,-2.13,0.13,1.63,1.18,0.01,">1 nonsynonymous","G9I N13M V37K V153A V173C",5
"lib2","SARS-CoV-2","ACTATACACTAAACAG",2,7.03,9.84,-0.99,0.36,1.72,1,0.04,">1 nonsynonymous","S45Q E141G V180L",3
"lib2","SARS-CoV-2","ACTATACATCAGTCCA",2,18.76,6.6,-4.24,0.44,1.5,1.07,0.03,">1 nonsynonymous","S41V G51V D68R R73Y Y119G K132P A145N A190V",8
"lib2","SARS-CoV-2","ACTATACCAACCGCAT",7,52.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R T15G V71Y F126L V153I",5
"lib2","SARS-CoV-2","ACTATACTCGACGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11R E135R A192*",3
"lib2","SARS-CoV-2","ACTATAGAAAAGATTG",4,60.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6K Y91S N118V Y178N",4
"lib2","SARS-CoV-2","ACTATAGAATTAAAAT",7,0.06,NA,NA,NA,NA,NA,NA,"stop","D97* A145L K199T",3
"lib2","SARS-CoV-2","ACTATAGACGTAGAGG",2,25.52,9.48,-1.35,0.15,1.94,1.01,0.01,">1 nonsynonymous","A14F D98K",2
"lib2","SARS-CoV-2","ACTATAGCAAAATATA",3,28.02,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N58K D68E L95G I142G",4
"lib2","SARS-CoV-2","ACTATAGCGCTAAAGT",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G S53V P82T N120E",4
"lib2","SARS-CoV-2","ACTATAGGCCTAATAC",14,162.67,10.65,-0.18,0.04,2.92,1.06,0,"1 nonsynonymous","R136H",1
"lib2","SARS-CoV-2","ACTATAGGCTATTAGG",4,52.44,6,-4.84,1.63,1.5,1.09,0,">1 nonsynonymous","D68T Y165S",2
"lib2","SARS-CoV-2","ACTATAGTAAATCCAT",16,195.49,10.17,-0.66,0.05,2.67,1.04,0,">1 nonsynonymous","L57F D97Y",2
"lib2","SARS-CoV-2","ACTATAGTAGTGTGTA",4,41.22,10.79,-0.05,0.05,3,1.02,0,">1 nonsynonymous","V173D L188H",2
"lib2","SARS-CoV-2","ACTATAGTGTCAAGAC",15,195.03,9.17,-1.67,0.03,2.92,1.07,0,">1 nonsynonymous","G116R N120P",2
"lib2","SARS-CoV-2","ACTATATAAATAGGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28M Y91*",2
"lib2","SARS-CoV-2","ACTATATACAAAAGCG",7,52.46,6.02,-4.82,1.01,1.5,1.13,0.01,">1 nonsynonymous","C6Y F44L G86I L122G E154M",5
"lib2","SARS-CoV-2","ACTATATACACACCGC",3,62.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L38S L95P T201S",3
"lib2","SARS-CoV-2","ACTATATCATCACCGC",12,202.09,7.09,-3.75,0.15,1.55,1.1,0,">1 nonsynonymous","S69Q D97L Y175S",3
"lib2","SARS-CoV-2","ACTATATCTTGCATCG",4,35.93,7.02,-3.81,0.25,1.57,1.1,0.01,">1 nonsynonymous","W23K A33S Y39Q",3
"lib2","SARS-CoV-2","ACTATATGAATCCAAT",4,0.38,NA,NA,NA,NA,NA,NA,"stop","C49* T63R D97A K132I V173R",5
"lib2","SARS-CoV-2","ACTATATGTCATTAAT",2,23.14,10.69,-0.14,0.08,2.99,1.04,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","ACTATATTGCTTGATC",3,50.87,6.67,-4.17,0.36,1.5,1.2,0.03,">1 nonsynonymous","K48V R127D",2
"lib2","SARS-CoV-2","ACTATATTTTTTTATT",1,19.86,10.82,-0.01,0.1,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATCAAAAAATACA",3,54.49,10.75,-0.08,0.04,2.95,1.07,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","ACTATCAATCTTCAAA",1,12.95,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A89L D97R N120I",3
"lib2","SARS-CoV-2","ACTATCACCTAGACCT",1,139.61,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S29E D90S Y121D Y143Q Y178I",5
"lib2","SARS-CoV-2","ACTATCATCATCCGCT",9,18.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15H W106M L122F V181T",4
"lib2","SARS-CoV-2","ACTATCATGTCGAACA",11,57.99,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N40F L60H P96Y G116F",4
"lib2","SARS-CoV-2","ACTATCATTACATCCT",4,105.45,9.71,-1.12,0.04,2.85,1.04,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","ACTATCCATCCTAGAA",8,0.95,NA,NA,NA,NA,NA,NA,"stop","I2W D59* V77Q P82T G101R L122N",6
"lib2","SARS-CoV-2","ACTATCCATTTCGACT",16,237.7,10.73,-0.11,0.03,2.95,1.06,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","ACTATCCCTACTCATC",2,89.66,10.61,-0.23,0.03,3,1,0,">1 nonsynonymous","N109M S129R",2
"lib2","SARS-CoV-2","ACTATCCTAACAAAAA",2,22.29,10.96,0.13,0.08,2.89,1.09,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","ACTATCCTGAAGTTCA",3,38.16,10.86,0.02,0.1,2.78,1.17,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","ACTATCGAGTTTAATC",3,15.52,10.42,-0.42,0.08,2.96,1.08,0,">1 nonsynonymous","F44S T201Q",2
"lib2","SARS-CoV-2","ACTATCGCACAATAGC",13,185.01,9.74,-1.1,0.07,2.15,1.06,0,"1 nonsynonymous","L38P",1
"lib2","SARS-CoV-2","ACTATCGCAGGTTGGC",3,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R F62S D90L E135A P149S Y159V Q168V",7
"lib2","SARS-CoV-2","ACTATCGCAGTTCAAA",3,45.06,10.99,0.16,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATCTATCTTCTAT",3,104.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40C G51Y P82H P177L",4
"lib2","SARS-CoV-2","ACTATCTCGGGCCGAG",5,2.14,NA,NA,NA,NA,NA,NA,"stop","Y50* D98L",2
"lib2","SARS-CoV-2","ACTATCTTAAATATAA",8,131.99,10.81,-0.03,0.04,2.89,1.11,0,">1 nonsynonymous","V32K T148R",2
"lib2","SARS-CoV-2","ACTATCTTAATATCTT",2,50.88,10.81,-0.03,0.08,2.89,1.06,0,"1 nonsynonymous","P149G",1
"lib2","SARS-CoV-2","ACTATCTTATGAACCG",3,13.42,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C6S R25V F134W",3
"lib2","SARS-CoV-2","ACTATCTTTGATCTGC",8,23.01,10.44,-0.4,0.32,1.5,1,0.06,">1 nonsynonymous","C6R E141I E154S P169R",4
"lib2","SARS-CoV-2","ACTATGAACACTAAAT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","I2M V11G A81M G86* P149I",5
"lib2","SARS-CoV-2","ACTATGAAGCAAGGCC",2,123.14,8.06,-2.77,0.15,2.09,1.06,0.01,">1 nonsynonymous","S43W G146E G152L",3
"lib2","SARS-CoV-2","ACTATGAGCTGATTCT",3,161.08,9.1,-1.73,0.04,2.92,1.09,0,">1 nonsynonymous","L5T N58E Y119D",3
"lib2","SARS-CoV-2","ACTATGCATCTCAACA",2,46.39,10.15,-0.68,0.08,2.67,1.06,0,"1 nonsynonymous","N13C",1
"lib2","SARS-CoV-2","ACTATGCATTTCATGA",1,53.29,10.71,-0.13,0.05,2.97,1.02,0,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","ACTATGCATTTGTAGA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","L38* K56L L122P C158S",4
"lib2","SARS-CoV-2","ACTATGCCCGCTATAA",7,177.72,10.88,0.05,0.05,2.9,1.09,0,">1 nonsynonymous","V37Y T100F K199L",3
"lib2","SARS-CoV-2","ACTATGCTTTGAGTGT",13,39.4,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T15E P82S A89G N151L G166A",5
"lib2","SARS-CoV-2","ACTATGGAACAGTTAC",1,346.92,9.94,-0.9,0.05,2.9,1.04,0,">1 nonsynonymous","T3N S45D Y175H",3
"lib2","SARS-CoV-2","ACTATGGAAGTAAGCA",4,9.17,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F8R F99S",2
"lib2","SARS-CoV-2","ACTATGGATAGATTAC",6,44.03,6.69,-4.15,0.41,1.5,1.19,0.02,">1 nonsynonymous","D34Y Y91L G166L",3
"lib2","SARS-CoV-2","ACTATGGCAAAAGAAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K I142H",2
"lib2","SARS-CoV-2","ACTATGGTAACAAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* K26* C31F G146K Y165K V194I",6
"lib2","SARS-CoV-2","ACTATGGTGCTAGCCT",4,40.42,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I88R G117L",2
"lib2","SARS-CoV-2","ACTATGTGGAACCTTA",6,97.3,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N30V A89R Y178S",3
"lib2","SARS-CoV-2","ACTATGTTTGTGGGTA",5,62.9,9.43,-1.41,0.12,1.69,1.08,0.01,">1 nonsynonymous","I2T K132Q V173T",3
"lib2","SARS-CoV-2","ACTATTAAACACACCC",2,42.07,10.66,-0.18,0.05,2.98,1,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","ACTATTAAACTGATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T Y39S K48R",3
"lib2","SARS-CoV-2","ACTATTAAAGACGACC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N1Q Y50* D98S S139R",4
"lib2","SARS-CoV-2","ACTATTAACCATCAAT",3,0.04,NA,NA,NA,NA,NA,NA,"stop","S41N D59G D90C A145H G152*",5
"lib2","SARS-CoV-2","ACTATTAACGTACTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* L131F S139E P149T Y178C S184*",6
"lib2","SARS-CoV-2","ACTATTAAGATAGATA",7,37.14,7.83,-3,0.27,1.5,1.14,0.03,">1 nonsynonymous","Y50N E154L",2
"lib2","SARS-CoV-2","ACTATTAAGCATTGCT",1,19.83,10.41,-0.43,0.14,2.75,1.19,0.01,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","ACTATTAAGTGACCGA",6,73.59,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40R N157L Q168C",3
"lib2","SARS-CoV-2","ACTATTAATATAAGTG",9,300.33,10.81,-0.02,0.05,2.88,1.11,0,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","ACTATTAATCCAAAGA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","L5A N92P Q163*",3
"lib2","SARS-CoV-2","ACTATTAATGGACTTT",5,11.09,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3G K114N F167T",3
"lib2","SARS-CoV-2","ACTATTACAAGAACCT",10,52.54,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6S G101R G166A",3
"lib2","SARS-CoV-2","ACTATTACCGGCCCCT",7,37.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K94I L131Q Y178C",3
"lib2","SARS-CoV-2","ACTATTACGATTAATA",5,59.99,10.76,-0.07,0.07,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTATTAGTTTACGAG",3,23.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F12N R16S E76S S139T",4
"lib2","SARS-CoV-2","ACTATTATAAATACAA",8,63.37,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T63K D68K N120D L122A",4
"lib2","SARS-CoV-2","ACTATTATATCTTTGG",4,1.34,NA,NA,NA,NA,NA,NA,"stop","D34T Y50P V71D I138V Y175L T201*",6
"lib2","SARS-CoV-2","ACTATTCAACTTTAAA",2,9.73,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","I2D S41L G86W D98Q N110L F134N I142A",7
"lib2","SARS-CoV-2","ACTATTCATAGAACCA",2,38.83,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V20N V173S",2
"lib2","SARS-CoV-2","ACTATTCATCAAGTAT",1,26.96,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","A18R D68E P96S T201I",4
"lib2","SARS-CoV-2","ACTATTCCCAGAAAGC",10,65.88,8.5,-2.33,0.13,1.5,1.05,0.01,">1 nonsynonymous","D98S N120C P133T P149N",4
"lib2","SARS-CoV-2","ACTATTCCGCGCTAAA",14,264.12,9.2,-1.63,0.04,2.9,1.1,0,">1 nonsynonymous","F62Y G166I",2
"lib2","SARS-CoV-2","ACTATTCTATGACACG",8,58,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I72H W106S V115K",3
"lib2","SARS-CoV-2","ACTATTGAATCGTTAA",3,176.47,10.41,-0.43,0.04,2.93,1.05,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","ACTATTGACACTAAAT",3,27.69,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V52G Y93N S184H",3
"lib2","SARS-CoV-2","ACTATTGACACTTGAG",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S F99S T170L",3
"lib2","SARS-CoV-2","ACTATTGCCAACGGTA",3,17.34,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S36L C49R T100N A105C",4
"lib2","SARS-CoV-2","ACTATTGCCAATCTCA",13,271.56,9.7,-1.13,0.07,2.08,1.05,0,">1 nonsynonymous","S19R V37R",2
"lib2","SARS-CoV-2","ACTATTGCCGTCAGTT",7,31.71,10.16,-0.68,0.08,2.77,1,0,">1 nonsynonymous","N107S K128T",2
"lib2","SARS-CoV-2","ACTATTGCCTGTTGTA",3,55.1,9.43,-1.41,0.11,1.88,1.05,0.01,">1 nonsynonymous","V37G D98H P133K",3
"lib2","SARS-CoV-2","ACTATTGGAATTCACT",1,12.98,9.48,-1.36,0.19,1.55,1.01,0.02,">1 nonsynonymous","F8K Y91L",2
"lib2","SARS-CoV-2","ACTATTGTATCTATAG",1,71.74,10.25,-0.58,0.08,2.65,1.05,0,">1 nonsynonymous","V11T T46I D97G L122R",4
"lib2","SARS-CoV-2","ACTATTGTGTAATATC",12,83.07,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","L57N P82G Y93T F126A C158L",5
"lib2","SARS-CoV-2","ACTATTTAAGTCCAAG",1,53.45,6,-4.84,2,3,1.24,0,">1 nonsynonymous","S45C I72G R124I",3
"lib2","SARS-CoV-2","ACTATTTACCAAAAAG",3,19.95,10.13,-0.71,0.12,2.46,1.04,0.01,">1 nonsynonymous","R16I K48E F185C C195R",4
"lib2","SARS-CoV-2","ACTATTTCAATAATAA",7,64.44,10.79,-0.05,0.06,2.98,1.04,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","ACTATTTCACGAGCTT",6,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y G51Q C158D G174F",4
"lib2","SARS-CoV-2","ACTATTTCTACTGAGC",1,52.74,10.42,-0.42,0.06,2.93,1.09,0,">1 nonsynonymous","S45Y E154R",2
"lib2","SARS-CoV-2","ACTATTTCTTTAAATC",3,33.28,9.59,-1.25,0.11,2.47,1.1,0.01,">1 nonsynonymous","A42Y K48H I104M I138W V153T",5
"lib2","SARS-CoV-2","ACTATTTGAGTGCTAG",5,59.71,6,-4.84,1.48,2.08,1.14,0,">1 nonsynonymous","G117W I142N C158V",3
"lib2","SARS-CoV-2","ACTATTTTAACCGCAC",3,131.63,8.53,-2.31,0.08,2.88,1.06,0,">1 nonsynonymous","S113F A190E",2
"lib2","SARS-CoV-2","ACTATTTTCGACCAAG",8,111.57,10.69,-0.14,0.06,2.95,1.07,0,">1 nonsynonymous","P96G L122S",2
"lib2","SARS-CoV-2","ACTATTTTTGCGAATT",3,27.44,10.82,-0.02,0.05,2.95,1.07,0,">1 nonsynonymous","T85L P197K",2
"lib2","SARS-CoV-2","ACTATTTTTTCCCCAA",6,63.01,10.16,-0.68,0.04,2.93,1.04,0,">1 nonsynonymous","V37Y S53V K87V F126L",4
"lib2","SARS-CoV-2","ACTCAAAAAAATTAAT",6,87.33,9.79,-1.05,0.08,2.29,1.06,0,">1 nonsynonymous","A42T S69N T148W",3
"lib2","SARS-CoV-2","ACTCAAAAAAGATGTA",4,41.99,6,-4.84,0.68,3,1.12,0,">1 nonsynonymous","L38M C158K",2
"lib2","SARS-CoV-2","ACTCAAAAACCAGAGC",5,79.6,10.79,-0.04,0.05,2.94,1.08,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","ACTCAAAACGATTTAT",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R K128I E154Y",3
"lib2","SARS-CoV-2","ACTCAAAAGATCAAAG",1,13.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136L G172S",2
"lib2","SARS-CoV-2","ACTCAAAAGATCTGAG",4,58.69,10.66,-0.18,0.07,2.78,1.1,0,"1 nonsynonymous","N1W",1
"lib2","SARS-CoV-2","ACTCAAACATTCTACA",3,21.03,9.99,-0.84,0.12,2.33,1,0.01,">1 nonsynonymous","R16P D90T",2
"lib2","SARS-CoV-2","ACTCAAACCATGGCAT",3,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A A89T N130S S139I G155R",5
"lib2","SARS-CoV-2","ACTCAAACGTAACGAC",11,20.71,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","A42K T100P A145C L162W",4
"lib2","SARS-CoV-2","ACTCAAACTAATACAC",1,1.75,NA,NA,NA,NA,NA,NA,"stop","D98S A105* P177E A192S",4
"lib2","SARS-CoV-2","ACTCAAAGAACCTAAT",6,192.79,10.29,-0.55,0.03,2.9,1.1,0,"1 nonsynonymous","N118A",1
"lib2","SARS-CoV-2","ACTCAAAGATTTATGA",4,0.61,NA,NA,NA,NA,NA,NA,"stop","S43* I72K N92C",3
"lib2","SARS-CoV-2","ACTCAAAGCCGAGCAA",2,25.55,10.29,-0.55,0.07,2.99,1.03,0,">1 nonsynonymous","G51K K87N",2
"lib2","SARS-CoV-2","ACTCAAATACGAAACA",5,85.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19K L60M V71W N107T E141K F167V",6
"lib2","SARS-CoV-2","ACTCAAATACGGGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","D34* K132M",2
"lib2","SARS-CoV-2","ACTCAAATCACACCTC",1,36.01,9.71,-1.13,0.13,2.04,1.03,0.01,">1 nonsynonymous","L5R G83D L162M",3
"lib2","SARS-CoV-2","ACTCAAATCTGATATG",9,39.39,9.34,-1.5,0.1,2.69,1.07,0,">1 nonsynonymous","A14S R78D T100V G116S Y178I",5
"lib2","SARS-CoV-2","ACTCAACAAATCACCG",1,10.9,10.96,0.13,0.05,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCAACACAATTTAA",11,276.25,10.71,-0.13,0.04,2.93,1.08,0,"1 nonsynonymous","E10A",1
"lib2","SARS-CoV-2","ACTCAACACCCTCGAT",4,82.58,8.7,-2.14,0.11,2.28,1.07,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","ACTCAACAGTACCAAT",9,215.27,10.44,-0.4,0.05,2.92,1.09,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","ACTCAACCACACAAAG",2,13.71,10.28,-0.56,0.16,2.51,1.12,0.01,">1 nonsynonymous","F62L E135K L187T",3
"lib2","SARS-CoV-2","ACTCAACCCGAAATTA",1,36.4,10.81,-0.02,0.07,2.98,1.06,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","ACTCAACCTCCACTAA",3,38.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P54L N118D G172E S200D",4
"lib2","SARS-CoV-2","ACTCAACCTGCCAAGA",6,34.56,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8L S41L A81F Y121Q",4
"lib2","SARS-CoV-2","ACTCAAGACTCCCAAG",2,47,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G9E Y35E A81R D90V D97Y N107W N151T",7
"lib2","SARS-CoV-2","ACTCAAGATATGTAAA",11,133.6,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14R C49T L57T F70N D98C G152V P177T",7
"lib2","SARS-CoV-2","ACTCAAGCTGAAACAA",5,72.01,10.92,0.08,0.1,2.84,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCAAGGAAATTAGT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","N58S D68V T140*",3
"lib2","SARS-CoV-2","ACTCAAGTGGCACAGG",7,27.3,6,-4.84,1.06,1.5,1.05,0,">1 nonsynonymous","S45F T100P S139C",3
"lib2","SARS-CoV-2","ACTCAATATGAGAAAG",8,18.83,8.53,-2.31,0.3,1.5,1.07,0.05,">1 nonsynonymous","R25Q Y91H",2
"lib2","SARS-CoV-2","ACTCAATTAACTTAAT",1,8.46,10.77,-0.07,0.06,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCAATTACAGAATA",5,1.55,NA,NA,NA,NA,NA,NA,"stop","D98N Y121N Q176*",3
"lib2","SARS-CoV-2","ACTCAATTATGTATAA",18,72.95,6,-4.84,2,1.5,1.36,0.04,">1 nonsynonymous","L95I I104K I142A",3
"lib2","SARS-CoV-2","ACTCAATTCGAGCAAC",3,15.41,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","D112Y N120P D137P Q168R",4
"lib2","SARS-CoV-2","ACTCAATTCTCCCTAA",4,84.95,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y35N N110K R124G H189A C195P",5
"lib2","SARS-CoV-2","ACTCACAAAAGTCGAG",5,148.56,10.52,-0.32,0.03,2.96,1.04,0,">1 nonsynonymous","P7Q Q84S K128Q E141S",4
"lib2","SARS-CoV-2","ACTCACAAAGCAGAAT",4,51.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L38P F44S F134T",3
"lib2","SARS-CoV-2","ACTCACAAAGGTCGAA",6,0.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","ACTCACAATCTAATAT",16,1.85,NA,NA,NA,NA,NA,NA,"stop","T3K I80*",2
"lib2","SARS-CoV-2","ACTCACAATTCATTGG",10,31.36,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","R16N D98K W106A N118P S129T G146L",6
"lib2","SARS-CoV-2","ACTCACACATATAACT",4,65.5,8.56,-2.27,0.1,2.93,1.1,0,">1 nonsynonymous","N157K Q168A Y178H",3
"lib2","SARS-CoV-2","ACTCACACCACCTAGA",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L T148F",2
"lib2","SARS-CoV-2","ACTCACAGACCAACTG",7,48.76,6,-4.84,2,3,1.13,0,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","ACTCACATAAAACAGA",12,87.97,10.86,0.03,0.06,2.97,1.03,0,"1 nonsynonymous","I28W",1
"lib2","SARS-CoV-2","ACTCACATAGACACCG",5,30.11,7.61,-3.22,0.28,1.5,1.09,0.02,">1 nonsynonymous","R124S F160N",2
"lib2","SARS-CoV-2","ACTCACCAGTAATTCG",4,0.91,NA,NA,NA,NA,NA,NA,"stop","S69N L122R P149L C150Y S200*",5
"lib2","SARS-CoV-2","ACTCACCCATTAAGAA",1,7.42,8.7,-2.14,0.19,2.26,1.03,0.01,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","ACTCACCGGGGAAAGC",3,168.99,10.3,-0.54,0.03,2.83,1.07,0,">1 nonsynonymous","G83R F134L V153E",3
"lib2","SARS-CoV-2","ACTCACCGTTATTCTT",6,126.45,9.91,-0.93,0.05,2.31,1.05,0,">1 nonsynonymous","S19K P54A",2
"lib2","SARS-CoV-2","ACTCACCTATCCCGAA",21,187.95,10.88,0.04,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCACCTGCACAACA",13,141.41,10.76,-0.07,0.06,2.87,1.14,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","ACTCACGAAATTTAAA",12,151,10.62,-0.22,0.02,2.94,1.05,0,">1 nonsynonymous","T3S D75N",2
"lib2","SARS-CoV-2","ACTCACGACCTATACG",6,0.06,NA,NA,NA,NA,NA,NA,"stop","N1Y T55G K94M Y159* F167K",5
"lib2","SARS-CoV-2","ACTCACGATGCATCAA",1,23.01,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","A18G S53I G86P A105S I142Q N171L",6
"lib2","SARS-CoV-2","ACTCACGCCAAAAATC",10,148.52,10.02,-0.81,0.04,2.85,1.06,0,">1 nonsynonymous","S29T Y121V",2
"lib2","SARS-CoV-2","ACTCACGCTAGGTAGA",16,161.38,10.81,-0.03,0.05,2.97,1.06,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","ACTCACGGATTCTTAC",2,101.26,10.85,0.01,0.04,2.83,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCACGTTTCTAGAA",1,82.28,8.27,-2.56,0.07,2.12,1.04,0,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","ACTCACTAGCCGTTAA",8,72.22,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","E135S P161I",2
"lib2","SARS-CoV-2","ACTCACTATCCTACAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S I138D S164L",3
"lib2","SARS-CoV-2","ACTCACTTTCCGGTGT",6,80.81,9.33,-1.5,0.04,2.9,1.11,0,">1 nonsynonymous","V37R Y119M",2
"lib2","SARS-CoV-2","ACTCAGAAACAAGTCT",19,11.55,NA,NA,NA,NA,NA,NA,"stop","C102R K128* G146W V182P",4
"lib2","SARS-CoV-2","ACTCAGAATACTGTTA",3,39.64,6.27,-4.57,0.44,1.5,1.17,0.01,">1 nonsynonymous","V37A P133G P177C",3
"lib2","SARS-CoV-2","ACTCAGACCCTGCAAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","V103* G116A P133C",3
"lib2","SARS-CoV-2","ACTCAGACCGTATGAC",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107H K128S",2
"lib2","SARS-CoV-2","ACTCAGAGACATGGGA",1,136.04,10.35,-0.49,0.02,2.9,1.07,0,">1 nonsynonymous","T85D G146S E154S",3
"lib2","SARS-CoV-2","ACTCAGAGGGAAGTAA",4,57.72,10.8,-0.04,0.04,2.95,1.06,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","ACTCAGAGTTAGAAAG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","A33* K94N Y119R",3
"lib2","SARS-CoV-2","ACTCAGCAATCACTGA",2,74.02,10.29,-0.55,0.06,2.89,1,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","ACTCAGCTGTGATTAC",6,25.41,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6L V52N F70D A89N",4
"lib2","SARS-CoV-2","ACTCAGGAATCTTATT",3,44.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9F D59V S113L P133Y Y165L S184F",6
"lib2","SARS-CoV-2","ACTCAGGACGAATGCA",2,14.38,9.16,-1.68,0.14,1.96,1,0.01,">1 nonsynonymous","D90L P149K N157V T201Q",4
"lib2","SARS-CoV-2","ACTCAGGATGAATGGC",7,58.01,9.94,-0.9,0.07,2.92,1.01,0,">1 nonsynonymous","F44P K87S",2
"lib2","SARS-CoV-2","ACTCAGGTCCGAATAG",6,75.76,8.92,-1.92,0.1,2.33,1.06,0,">1 nonsynonymous","L111S S139H",2
"lib2","SARS-CoV-2","ACTCAGTATGTGAACG",2,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D A89E N109V K114F E135W",5
"lib2","SARS-CoV-2","ACTCAGTATTTTTCAA",5,158.02,10.35,-0.49,0.04,2.92,1.06,0,">1 nonsynonymous","Y35C S41Q S200K",3
"lib2","SARS-CoV-2","ACTCAGTCACTCATAA",6,99.43,10.28,-0.55,0.06,2.76,1.03,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","ACTCAGTGTTGAGACA",3,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y F99S R179T",3
"lib2","SARS-CoV-2","ACTCATAAAGGTTGAC",3,76.56,9.64,-1.19,0.12,2.22,1.1,0,">1 nonsynonymous","I2S K128F F160I S184M",4
"lib2","SARS-CoV-2","ACTCATAACGCGACAA",8,219.89,10.86,0.03,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCATAAGGCGATTT",2,8.4,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","ACTCATAATACTGAAT",6,192.51,9.19,-1.64,0.03,2.95,1.04,0,">1 nonsynonymous","I2V K87N P177A T201N",4
"lib2","SARS-CoV-2","ACTCATAATCACTATT",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116N N151K",2
"lib2","SARS-CoV-2","ACTCATAGACAATACC",9,143.84,8.99,-1.84,0.06,1.99,1.09,0,"1 nonsynonymous","P161V",1
"lib2","SARS-CoV-2","ACTCATATAAATGAAA",11,31.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P7G A33T Y121R P149S S184G",5
"lib2","SARS-CoV-2","ACTCATATCGTAAATC",3,0.58,NA,NA,NA,NA,NA,NA,"stop","P7D I28Q D68M D90Q F99S Y178*",6
"lib2","SARS-CoV-2","ACTCATCCAAAAAAAC",1,47.04,10.47,-0.37,0.06,2.88,1.06,0,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","ACTCATCCACGAAAGG",1,25.17,10.68,-0.16,0.04,2.97,1.06,0,"1 nonsynonymous","I138K",1
"lib2","SARS-CoV-2","ACTCATCCCAACCGAG",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D T55S E154M",3
"lib2","SARS-CoV-2","ACTCATCCCCTACTTG",7,119.01,10.86,0.02,0.06,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCATCCCGCGTTAA",1,38.06,9.89,-0.95,0.07,2.77,1.04,0,"1 nonsynonymous","C6P",1
"lib2","SARS-CoV-2","ACTCATCCCTGCCATT",2,15.1,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","T63L N92L P161Y",3
"lib2","SARS-CoV-2","ACTCATCTGCGATGCT",1,1.03,NA,NA,NA,NA,NA,NA,"stop","A18* V103N S108M K128F Y159H",5
"lib2","SARS-CoV-2","ACTCATGAATGAAGTA",3,84.75,8.94,-1.9,0.08,2.91,1.1,0,"1 nonsynonymous","G146C",1
"lib2","SARS-CoV-2","ACTCATGATATAGACG",2,7.72,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V20D Y39M D98V",3
"lib2","SARS-CoV-2","ACTCATGCACCCAATT",8,135.23,10.41,-0.42,0.05,2.85,1.08,0,">1 nonsynonymous","K56G D97P G116S",3
"lib2","SARS-CoV-2","ACTCATGGTTCACTTA",8,29.84,8.58,-2.25,0.23,1.5,1.07,0.02,">1 nonsynonymous","P7F G51D",2
"lib2","SARS-CoV-2","ACTCATGTGCTAGTGA",11,132.75,9.66,-1.18,0.09,2.47,1.04,0,">1 nonsynonymous","C31W N64K P149N",3
"lib2","SARS-CoV-2","ACTCATTAAACTTTGC",1,50.45,10.16,-0.68,0.05,2.93,1.05,0,">1 nonsynonymous","C31D V37H",2
"lib2","SARS-CoV-2","ACTCATTAAATTCTGT",2,28.83,10.6,-0.24,0.1,2.71,1.03,0,"1 nonsynonymous","S139M",1
"lib2","SARS-CoV-2","ACTCATTCAGTTTCCG",20,8.95,NA,NA,NA,NA,NA,NA,"stop","F44T R136*",2
"lib2","SARS-CoV-2","ACTCATTCCATTTTAT",2,61.53,10.85,0.02,0.07,2.9,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTCATTCTGGAAAAG",16,249.89,10.89,0.05,0.03,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCATTGCTGCCTGG",2,114.88,8.86,-1.97,0.08,2.4,1.1,0,">1 nonsynonymous","L60T N118I V173L A192T",4
"lib2","SARS-CoV-2","ACTCATTTATTGGGAA",3,0.72,NA,NA,NA,NA,NA,NA,"stop","L5Y Y39G I80S Q163*",4
"lib2","SARS-CoV-2","ACTCATTTCACCCTGC",1,5.65,NA,NA,NA,NA,NA,NA,"stop","Y50F G86L N151* T201K",4
"lib2","SARS-CoV-2","ACTCATTTGATGATCC",2,55.15,8.82,-2.02,0.14,1.78,1.13,0.01,">1 nonsynonymous","V32L Y35H F47L I138Q",4
"lib2","SARS-CoV-2","ACTCCAAAATTCAAAT",3,54.44,10.29,-0.55,0.05,2.77,1.12,0,"1 nonsynonymous","S139V",1
"lib2","SARS-CoV-2","ACTCCAACCTATGTCA",2,11.8,9.81,-1.03,0.16,2.66,1.07,0.01,">1 nonsynonymous","C6I L60S",2
"lib2","SARS-CoV-2","ACTCCAACCTGACGGG",9,112.6,10.8,-0.03,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCCAACGCGGATAA",3,148.35,10.48,-0.36,0.03,2.92,1.08,0,">1 nonsynonymous","G9T L60K A192D",3
"lib2","SARS-CoV-2","ACTCCAACGGAAAAAA",7,1.35,NA,NA,NA,NA,NA,NA,"stop","N13T S41L C61K Y93*",4
"lib2","SARS-CoV-2","ACTCCAACTTATCCAT",3,63.77,9.13,-1.7,0.13,1.89,1.06,0.01,">1 nonsynonymous","C6E V37Y S53W P149Q",4
"lib2","SARS-CoV-2","ACTCCAAGCTAGGGTT",1,46.75,9.13,-1.71,0.09,1.97,1.06,0,">1 nonsynonymous","L5P G86D V115Q",3
"lib2","SARS-CoV-2","ACTCCAATGCAAACAT",6,112.56,8.3,-2.53,0.13,2.8,1.09,0.01,">1 nonsynonymous","L5S D90E I138T N157K",4
"lib2","SARS-CoV-2","ACTCCAATTCAAGGCG",4,50.89,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","S43G Y93N L125M G166M R179W",5
"lib2","SARS-CoV-2","ACTCCAATTCGAGGCT",4,65.9,9.55,-1.29,0.04,2.88,1.09,0,">1 nonsynonymous","A14R V115L T170A",3
"lib2","SARS-CoV-2","ACTCCACAATACAGGA",1,10.53,8.14,-2.7,0.26,1.5,1.11,0.03,">1 nonsynonymous","F12C Q84I G174D",3
"lib2","SARS-CoV-2","ACTCCACACAGAAACT",4,10.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14P L57W",2
"lib2","SARS-CoV-2","ACTCCACCCCCCACTG",2,0.52,NA,NA,NA,NA,NA,NA,"stop","S41* W106K N120V",3
"lib2","SARS-CoV-2","ACTCCACGTTATTCCC",7,8.46,7.64,-3.19,0.49,1.5,1,0.06,">1 nonsynonymous","T15S V103N V115W L131H I138L",5
"lib2","SARS-CoV-2","ACTCCACTAATCCCCA",5,1.21,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib2","SARS-CoV-2","ACTCCACTGACCATTA",2,14.1,9.6,-1.24,0.14,2.16,1.11,0.01,">1 nonsynonymous","G9V A33G L57S",3
"lib2","SARS-CoV-2","ACTCCAGATAATCAGA",5,135.03,10.63,-0.2,0.05,2.88,1.1,0,">1 nonsynonymous","T15S E135G",2
"lib2","SARS-CoV-2","ACTCCAGTAATAAGAA",1,34.08,10.46,-0.37,0.06,3,1,0,"1 nonsynonymous","C31P",1
"lib2","SARS-CoV-2","ACTCCAGTTAAAAAAC",4,9.16,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C102G N107S Q144N",3
"lib2","SARS-CoV-2","ACTCCATATCTCTCAT",8,116.31,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4Q P82N A89T L95D D112V R136G Y143K T148I Y178W A190I",10
"lib2","SARS-CoV-2","ACTCCATTATAGGACA",13,96.56,8.75,-2.09,0.15,1.5,1.08,0.01,"1 nonsynonymous","W23K",1
"lib2","SARS-CoV-2","ACTCCCAAATGTGTGT",9,11.85,NA,NA,NA,NA,NA,NA,"stop","E10T Y21F D97E N107Q Q144W G152*",6
"lib2","SARS-CoV-2","ACTCCCAACGGGACAG",4,0.58,NA,NA,NA,NA,NA,NA,"stop","R27* F44D D90P L122V G146W",5
"lib2","SARS-CoV-2","ACTCCCAATATAAGTA",2,14.29,6.94,-3.9,0.35,1.5,1,0.03,">1 nonsynonymous","F134P Q144R G152N N157S T170V",5
"lib2","SARS-CoV-2","ACTCCCAATCGGCGAT",3,53.28,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F134V F167H H189S",3
"lib2","SARS-CoV-2","ACTCCCACAGACCCCA",2,23.51,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","C49S N64E P82R E135S F167W V173S",6
"lib2","SARS-CoV-2","ACTCCCAGTTTTCTCT",18,78.56,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","D137R P161R P191R",3
"lib2","SARS-CoV-2","ACTCCCATCATAGTCC",4,23.73,9.65,-1.19,0.12,1.86,1.06,0.01,">1 nonsynonymous","A105N S200D",2
"lib2","SARS-CoV-2","ACTCCCATTACAACGA",10,165.57,10.03,-0.81,0.05,2.78,1.06,0,">1 nonsynonymous","T46W T85L Q168R",3
"lib2","SARS-CoV-2","ACTCCCCATCGGCCTT",2,41.2,10.83,0,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCCCGAAACCTAAC",2,15.93,9.24,-1.59,0.18,1.91,1.12,0.02,">1 nonsynonymous","F62D F167Y",2
"lib2","SARS-CoV-2","ACTCCCGAACTGTGGG",12,159.83,10.76,-0.07,0.07,2.73,1.1,0,">1 nonsynonymous","G152D F160R",2
"lib2","SARS-CoV-2","ACTCCCGACCCAGTAA",4,97.03,7.56,-3.28,0.17,1.5,1.11,0.01,">1 nonsynonymous","T55Y S113L G152H",3
"lib2","SARS-CoV-2","ACTCCCGATAAAAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104P N120L N157R",3
"lib2","SARS-CoV-2","ACTCCCGATCTGGCGG",10,99.48,9.09,-1.74,0.13,1.73,1.11,0.01,">1 nonsynonymous","S53K W106S N120S",3
"lib2","SARS-CoV-2","ACTCCCGATGCACGCA",5,115.57,10.7,-0.14,0.04,2.88,1.1,0,"1 nonsynonymous","E154N",1
"lib2","SARS-CoV-2","ACTCCCGCCAACATCC",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84A V180K",2
"lib2","SARS-CoV-2","ACTCCCTTCAATTTGA",3,1.38,NA,NA,NA,NA,NA,NA,"stop","Q84C G116C G146L E154*",4
"lib2","SARS-CoV-2","ACTCCCTTTATCGTAG",1,9.74,9.81,-1.03,0.06,2.96,1.04,0,">1 nonsynonymous","N30V V37K N130R G174D",4
"lib2","SARS-CoV-2","ACTCCGAAGCCACTAC",2,0.39,NA,NA,NA,NA,NA,NA,"stop","N13I S19M C31T L57* N151L",5
"lib2","SARS-CoV-2","ACTCCGAATTCTTCTT",8,131.11,6.01,-4.82,1.03,1.5,1.19,0.02,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","ACTCCGATGAACAGGA",13,141.57,6.87,-3.97,0.26,1.5,1.16,0.01,">1 nonsynonymous","E10L F17W Y35N N107A E141G A190V",6
"lib2","SARS-CoV-2","ACTCCGCCAATATTAA",1,31.35,10.03,-0.81,0.07,2.31,1.08,0,">1 nonsynonymous","Y66T G83Y Y91C",3
"lib2","SARS-CoV-2","ACTCCGCTGAATTATG",18,277.89,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D90T N118L F160Y G172L",4
"lib2","SARS-CoV-2","ACTCCGGCAAGAAATA",1,25.74,10.87,0.04,0.07,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCCGGGCGTTCAGC",9,167.54,10.51,-0.33,0.05,2.9,1.07,0,">1 nonsynonymous","Y121F P149R",2
"lib2","SARS-CoV-2","ACTCCGGTGTGACACT",1,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N L95E W106V S184I",4
"lib2","SARS-CoV-2","ACTCCGTACAAAAAGC",2,107.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29E T46N K56Y K94A S113G K132A",6
"lib2","SARS-CoV-2","ACTCCTAAGGAAATAA",5,93.68,10.64,-0.2,0.03,2.96,1.04,0,">1 nonsynonymous","F8L A89S",2
"lib2","SARS-CoV-2","ACTCCTACAGCGAGAG",1,27.01,9.11,-1.72,0.09,2.69,1.12,0,">1 nonsynonymous","I2K D34V L125T",3
"lib2","SARS-CoV-2","ACTCCTATACGACTGA",3,0.96,NA,NA,NA,NA,NA,NA,"stop","P82A D97Y N107L Y143* Q168L",5
"lib2","SARS-CoV-2","ACTCCTCACACACATA",4,28.49,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N107S C158W",2
"lib2","SARS-CoV-2","ACTCCTCCGCCGTAAA",8,56.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82T K94D A105T",3
"lib2","SARS-CoV-2","ACTCCTCCTACAAGAA",13,139.5,6.24,-4.59,0.41,1.5,1.15,0.01,">1 nonsynonymous","A33F Y39S N107S L122P",4
"lib2","SARS-CoV-2","ACTCCTCTTAAGACAA",1,61,10.54,-0.3,0.07,2.97,1.01,0,">1 nonsynonymous","D97Y A105S S200Y",3
"lib2","SARS-CoV-2","ACTCCTGAAAGACGCG",6,55.38,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","D112P",1
"lib2","SARS-CoV-2","ACTCCTGATGCTTACT",3,49.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A105L T148P P161R",3
"lib2","SARS-CoV-2","ACTCCTGGCCAATACG",3,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q W106D Q168P V173R",4
"lib2","SARS-CoV-2","ACTCCTTAAAATAACA",6,1.54,NA,NA,NA,NA,NA,NA,"stop","F44L Q84* A89H G152F F156T",5
"lib2","SARS-CoV-2","ACTCCTTACCAAACCA",2,73.01,10.34,-0.5,0.06,2.86,1.04,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","ACTCCTTTAATTGATA",7,53.08,10.61,-0.22,0.05,2.9,1.08,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","ACTCCTTTCCCTAGAC",11,133.07,10.89,0.05,0.06,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCCTTTCCGACTGC",5,76.38,10.85,0.01,0.03,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTCCTTTTTACGGAT",6,65.8,6.67,-4.17,0.41,1.5,1.09,0.03,">1 nonsynonymous","N13T K94S Q176W",3
"lib2","SARS-CoV-2","ACTCGAAAAGAAAAAG",3,58.44,10.72,-0.11,0.06,2.8,1.14,0,"1 nonsynonymous","H189I",1
"lib2","SARS-CoV-2","ACTCGAAAAGTAGAGT",4,111.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y39D S43P N107H E141P P161V",5
"lib2","SARS-CoV-2","ACTCGAAAGAACCCAC",11,234.04,10.67,-0.17,0.03,2.89,1.04,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","ACTCGAAAGTTGTAAC",4,42.9,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S43K K94L P161T",3
"lib2","SARS-CoV-2","ACTCGAAATACAATAT",11,0.6,NA,NA,NA,NA,NA,NA,"stop","A18S K56F G86M Y91N Y121M G152*",6
"lib2","SARS-CoV-2","ACTCGAAATCATTTAA",1,126.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K F62W T148A Q176N",4
"lib2","SARS-CoV-2","ACTCGAACATCTAAAC",13,275.04,10.34,-0.49,0.04,2.78,1.06,0,">1 nonsynonymous","E135R T201V",2
"lib2","SARS-CoV-2","ACTCGAAGATACACGA",8,41.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18R P82M N110L",3
"lib2","SARS-CoV-2","ACTCGAAGCTCAACTG",7,109.14,10.23,-0.61,0.03,2.71,1.03,0,">1 nonsynonymous","V71L S129Y",2
"lib2","SARS-CoV-2","ACTCGAAGTGTAAATC",7,98.94,10.71,-0.12,0.03,2.98,1.03,0,">1 nonsynonymous","S29M S129R",2
"lib2","SARS-CoV-2","ACTCGAAGTTAGCTAG",6,63.5,6,-4.84,1.23,1.5,1.18,0.02,">1 nonsynonymous","S29Q A81M A89F Q163L",4
"lib2","SARS-CoV-2","ACTCGAATATATGTAA",1,12.45,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N107L N110H F160L",3
"lib2","SARS-CoV-2","ACTCGACACCTTCATG",5,35.31,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9M W23R C61G S129L T170R",5
"lib2","SARS-CoV-2","ACTCGACCACAAGCTA",6,54.04,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R25G Y35T K114M N151C G174M",5
"lib2","SARS-CoV-2","ACTCGACCATAACGCT",4,58.15,8.48,-2.36,0.2,1.88,1.11,0.01,">1 nonsynonymous","R27E G83H K128Y G174V A190L",5
"lib2","SARS-CoV-2","ACTCGACCCCGGTAAG",1,0.99,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ACTCGACGCCACTTAA",10,59.4,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A14Y S41K D59E N64V I88Y K198P",6
"lib2","SARS-CoV-2","ACTCGACGCGTTCTTC",5,68.86,10.65,-0.18,0.03,2.93,1.06,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","ACTCGACTAGGAAATT",3,1.2,NA,NA,NA,NA,NA,NA,"stop","V71* G83K T100F A105Y S113Y A192L",6
"lib2","SARS-CoV-2","ACTCGACTAGTTAAAC",3,0.45,NA,NA,NA,NA,NA,NA,"stop","F8V V52S G83F W106K N120* N157K T201P",7
"lib2","SARS-CoV-2","ACTCGAGGAAACCTAA",2,23.14,8.83,-2.01,0.37,1.5,1,0.06,">1 nonsynonymous","C6I Y35F K56L D68Q G86F W106G G117W T170Q",8
"lib2","SARS-CoV-2","ACTCGAGGTCAATTAA",3,1.09,NA,NA,NA,NA,NA,NA,"stop","P82E I88* I104L",3
"lib2","SARS-CoV-2","ACTCGATGAACTATTT",3,25.31,9.15,-1.68,0.13,2.11,1,0,">1 nonsynonymous","N107V A192S",2
"lib2","SARS-CoV-2","ACTCGATTATGGTAGG",6,33.01,10.84,0,0.06,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCGATTTAACCTGG",3,79.51,10.78,-0.05,0.03,2.98,1.06,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","ACTCGCAAGTATCATG",8,80.58,10.17,-0.67,0.04,2.94,1.04,0,">1 nonsynonymous","R27I N110T G174F",3
"lib2","SARS-CoV-2","ACTCGCACTTCAACGC",2,29.74,10.81,-0.02,0.1,2.73,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCGCAGATACCGAC",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S139N Y165T",3
"lib2","SARS-CoV-2","ACTCGCCTGTGCCTCT",3,75.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119F Y175P",2
"lib2","SARS-CoV-2","ACTCGCGATACACACA",4,7.79,10.34,-0.49,0.16,2.06,1,0,">1 nonsynonymous","D90S N107G",2
"lib2","SARS-CoV-2","ACTCGCGATATATACT",4,27.46,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I28E Y35H D97S S164L",4
"lib2","SARS-CoV-2","ACTCGCGCAGGTACAG",1,76.91,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N58F S113M P169R Y175L",4
"lib2","SARS-CoV-2","ACTCGCGCCATAAATA",3,82.94,10.68,-0.16,0.03,2.95,1.04,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","ACTCGCGTCCGATAGC",8,106.75,10.86,0.03,0.08,2.9,1.11,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","ACTCGCGTTCCTACCG",2,0,NA,NA,NA,NA,NA,NA,"stop","F12* Y35S T63* N130D A190S",5
"lib2","SARS-CoV-2","ACTCGCTATGATTCCA",2,50.54,10.4,-0.44,0.05,2.92,1.01,0,">1 nonsynonymous","A14G A42D",2
"lib2","SARS-CoV-2","ACTCGCTCCTACGCTG",1,25.42,10.78,-0.05,0.06,2.99,1.03,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","ACTCGCTGGGACAAAA",1,27.03,9.55,-1.29,0.18,2.24,1,0.02,">1 nonsynonymous","S41T A145N",2
"lib2","SARS-CoV-2","ACTCGCTTTATATGAA",4,166.29,10.26,-0.58,0.03,2.97,1.04,0,"1 nonsynonymous","R73M",1
"lib2","SARS-CoV-2","ACTCGGAGCTTGATTG",7,70.22,9.93,-0.9,0.08,2.48,1.06,0,">1 nonsynonymous","G51D T63R",2
"lib2","SARS-CoV-2","ACTCGGATATGGCACG",5,17.83,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P82M K87E",2
"lib2","SARS-CoV-2","ACTCGGATCAATCCCA",4,11.9,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C158T G172T L183G C195G",4
"lib2","SARS-CoV-2","ACTCGGATTATCAGAC",13,213.85,10.42,-0.42,0.04,2.93,1.04,0,">1 nonsynonymous","T15D T140L T201M",3
"lib2","SARS-CoV-2","ACTCGGATTTCTCATA",2,6.42,9.74,-1.1,0.27,1.9,1.48,0.04,">1 nonsynonymous","S53L Y91G L122M",3
"lib2","SARS-CoV-2","ACTCGGCATTCTTCAG",3,0.68,NA,NA,NA,NA,NA,NA,"stop","I2P N13S Y35I T46K L57F D90* F99N",7
"lib2","SARS-CoV-2","ACTCGGTCGACAATAA",3,0.69,NA,NA,NA,NA,NA,NA,"stop","A89* P96R T201Y",3
"lib2","SARS-CoV-2","ACTCGTAAACTGGGCC",3,35.94,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","F12T R25D L131N P149A",4
"lib2","SARS-CoV-2","ACTCGTAACGCACATA",3,47.41,10.93,0.09,0.06,2.93,1.09,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","ACTCGTAAGTAGGTTT",2,53.51,10.4,-0.44,0.04,2.85,1.03,0,">1 nonsynonymous","A42I T100A",2
"lib2","SARS-CoV-2","ACTCGTAATATAGCAA",14,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D C6F A33T S41L L95R F160P V173P A190I",8
"lib2","SARS-CoV-2","ACTCGTAATTTAATTG",16,200.05,8.61,-2.22,0.08,2.9,1.08,0,">1 nonsynonymous","K56M T85V N171R T201S",4
"lib2","SARS-CoV-2","ACTCGTACGACATAAA",12,142.97,10.84,0,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTCGTAGAAGCCGCC",10,60.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36F D68E N107Y G116R",4
"lib2","SARS-CoV-2","ACTCGTGCACTTACGA",9,54.07,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V77M L95F S139L P177S",4
"lib2","SARS-CoV-2","ACTCGTTACATCTGGG",23,91.81,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F44P C49G G116S G146L K198Q",5
"lib2","SARS-CoV-2","ACTCGTTACTTTATAG",2,27.88,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","I88Q K114N",2
"lib2","SARS-CoV-2","ACTCGTTAGAGACACA",14,280.92,10.81,-0.02,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCGTTCGACTAACA",2,8.14,11.01,0.18,0.17,2.82,1.18,0.01,"1 nonsynonymous","S43G",1
"lib2","SARS-CoV-2","ACTCGTTTAATTCATC",5,82.61,10.84,0,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCGTTTGCCGCATG",2,52.47,7.19,-3.65,0.22,1.5,1.09,0.01,">1 nonsynonymous","I2G G9L L38T F160A G166K",5
"lib2","SARS-CoV-2","ACTCTAAAAGTATATT",9,75.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19E G86Y Y121L",3
"lib2","SARS-CoV-2","ACTCTAAACTTGCCTG",5,87.89,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S69G Q176S",2
"lib2","SARS-CoV-2","ACTCTAAATCTTATGA",3,20.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26R F44D Y159F G166R Y178L",5
"lib2","SARS-CoV-2","ACTCTAAATTTAACAA",2,17.18,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R16F S69M D112E G117T Q144N",5
"lib2","SARS-CoV-2","ACTCTAACATGTTGGC",1,10.88,10.04,-0.8,0.05,2.97,1.04,0,">1 nonsynonymous","N110V F156T",2
"lib2","SARS-CoV-2","ACTCTAACATTAACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61S N118D G155* Y175W",4
"lib2","SARS-CoV-2","ACTCTAACGACAGTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85D K94I P149L",3
"lib2","SARS-CoV-2","ACTCTAAGTAACCTAA",4,81.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35R K87E P96A G166Y",4
"lib2","SARS-CoV-2","ACTCTAATGGGCGAGT",4,86.83,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","W106P S113K Y165T Q176G T201L",5
"lib2","SARS-CoV-2","ACTCTACACTGACATC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","R127I Q176*",2
"lib2","SARS-CoV-2","ACTCTACGAGTGATAC",3,14.51,6.64,-4.19,0.76,1.5,1.26,0.05,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","ACTCTAGAAGAAAACG",4,19.46,9.76,-1.08,0.1,2.31,1,0.01,">1 nonsynonymous","N4Q D34L S43P D59W T201D",5
"lib2","SARS-CoV-2","ACTCTAGCTAGTCTAG",21,116.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R78L D112L L122A E135V A190V",5
"lib2","SARS-CoV-2","ACTCTAGTATGATACA",2,63.9,8.11,-2.73,0.12,2.64,1.01,0.01,">1 nonsynonymous","N151D N157K G174S",3
"lib2","SARS-CoV-2","ACTCTAGTATTGGCGA",14,106.76,7.96,-2.87,0.13,1.83,1.06,0.01,">1 nonsynonymous","C61I G116Y E141N G155L",4
"lib2","SARS-CoV-2","ACTCTAGTTGTCGACA",4,59.17,10.88,0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCTATAAACACACT",11,74.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25G D98L",2
"lib2","SARS-CoV-2","ACTCTATAAACCAAAC",2,60.09,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L5I A14Y V20N V32K T46I E141A L183W",7
"lib2","SARS-CoV-2","ACTCTATATAAATTTC",1,41.3,10.28,-0.55,0.08,2.36,1.03,0,"1 nonsynonymous","W23P",1
"lib2","SARS-CoV-2","ACTCTATATCTATATC",3,5.81,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","I2T S45K T55M A81V C102S",5
"lib2","SARS-CoV-2","ACTCTATCGATTACAA",4,27.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16L L60K D98I S139H T201K",5
"lib2","SARS-CoV-2","ACTCTATGACGATCCC",1,22.94,6,-4.84,1.38,3,1.17,0.01,">1 nonsynonymous","D137L G152R Q176F",3
"lib2","SARS-CoV-2","ACTCTCAAAGAAAAGA",1,32.81,6,-4.84,2,3,1.19,0,">1 nonsynonymous","P54Q R124D F134G",3
"lib2","SARS-CoV-2","ACTCTCAAGCAGCACG",11,47.38,9.55,-1.29,0.17,1.8,1.05,0.01,">1 nonsynonymous","E10V A105G E154S G196A",4
"lib2","SARS-CoV-2","ACTCTCACGATCCCTA",2,43.7,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P82E G117D K128S G155L F167G",5
"lib2","SARS-CoV-2","ACTCTCACTCATGTAC",5,93.38,10.88,0.05,0.05,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTCTCATACCCCGAA",4,17.13,10.67,-0.16,0.07,3,1.06,0,"1 nonsynonymous","K48I",1
"lib2","SARS-CoV-2","ACTCTCATCTGTGGGC",1,19.84,10.81,-0.02,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCTCCTAAGAAACG",3,90.42,8.17,-2.66,0.12,1.95,1.07,0,">1 nonsynonymous","F44A R127G G174E",3
"lib2","SARS-CoV-2","ACTCTCGGTAAAACCA",1,21.89,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15K T100S Y123T P133A N157L",5
"lib2","SARS-CoV-2","ACTCTCGGTACATAAT",5,53.95,8.52,-2.31,0.1,2.45,1.13,0,">1 nonsynonymous","Q84K P161T",2
"lib2","SARS-CoV-2","ACTCTCTAACAAAAGA",2,163.99,10.59,-0.24,0.03,2.91,1.07,0,">1 nonsynonymous","T55S L95I F134L",3
"lib2","SARS-CoV-2","ACTCTCTACCGATTGA",4,68.6,8.85,-1.98,0.09,2.73,1.06,0,">1 nonsynonymous","N4K T63A A89S N157S",4
"lib2","SARS-CoV-2","ACTCTCTACTCTTAAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57H P177W",2
"lib2","SARS-CoV-2","ACTCTCTGGTATGCAA",6,125.36,10.61,-0.23,0.04,2.93,1.04,0,"1 nonsynonymous","E135S",1
"lib2","SARS-CoV-2","ACTCTCTGTCACTCCC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","G9Q T63F L131S F185*",4
"lib2","SARS-CoV-2","ACTCTGAAAGTAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D97* S113V",2
"lib2","SARS-CoV-2","ACTCTGAATCACCGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","ACTCTGACTCTCACCT",6,71.55,10.69,-0.15,0.02,2.95,1.05,0,">1 nonsynonymous","N24R K128T I138K",3
"lib2","SARS-CoV-2","ACTCTGACTGAACCAT",5,11.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S45L V103K K114V F160Y S200L",6
"lib2","SARS-CoV-2","ACTCTGAGCCATAATT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C G74R P96T Q168L",4
"lib2","SARS-CoV-2","ACTCTGATTAATCTTA",6,2.62,NA,NA,NA,NA,NA,NA,"stop","I2D C49M G117E A192* P197V",5
"lib2","SARS-CoV-2","ACTCTGCAATATACGC",2,12.15,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","T63W F70I",2
"lib2","SARS-CoV-2","ACTCTGCATCAGTCAA",19,187.44,9.8,-1.03,0.07,2.18,1.04,0,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","ACTCTGCCAAGGGACC",2,43.02,10.88,0.04,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCTGCCAGATGCTA",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y Y121N Y175F",3
"lib2","SARS-CoV-2","ACTCTGCCCCGGCTCA",7,133.98,10.49,-0.35,0.04,2.92,1.06,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","ACTCTGCTGATATTCA",2,31.41,8.5,-2.34,0.13,1.79,1.19,0.01,">1 nonsynonymous","A33S N107H",2
"lib2","SARS-CoV-2","ACTCTGCTTGTCTTTA",7,2.5,NA,NA,NA,NA,NA,NA,"stop","Y39L I88L L95* Y178I",4
"lib2","SARS-CoV-2","ACTCTGGAAAGGCAGC",1,40.76,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P82T A89S S129F F156L",4
"lib2","SARS-CoV-2","ACTCTGGAGACATCAC",8,117.17,6,-4.84,1.62,1.5,1.13,0.01,"1 nonsynonymous","D112P",1
"lib2","SARS-CoV-2","ACTCTGGATGAAGTAT",3,36.96,9.07,-1.76,0.14,1.79,1.04,0.01,">1 nonsynonymous","R27Q D34N K94V",3
"lib2","SARS-CoV-2","ACTCTGGGTCAACGTT",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98S N118I L183G",3
"lib2","SARS-CoV-2","ACTCTGGTCAGGTTCA",6,60.18,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","S19M F62C T85M G101K",4
"lib2","SARS-CoV-2","ACTCTGGTTAGAATTA",1,1.1,NA,NA,NA,NA,NA,NA,"stop","N4G Y91S F167P E186*",4
"lib2","SARS-CoV-2","ACTCTGTACACATGCT",8,35.86,7.88,-2.95,0.25,1.5,1.12,0.02,">1 nonsynonymous","F44V T55P Q176A",3
"lib2","SARS-CoV-2","ACTCTGTAGTTCCCGA",2,42.17,10.95,0.11,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCTGTCCCTCTCCG",10,25.07,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","S41F N92R R127S",3
"lib2","SARS-CoV-2","ACTCTGTGAATTTAAG",13,4.43,NA,NA,NA,NA,NA,NA,"stop","T15G G86E S129C I138R P149L Q163*",6
"lib2","SARS-CoV-2","ACTCTGTTGTGCATAA",10,163.16,8.39,-2.44,0.1,2.83,1.09,0,">1 nonsynonymous","T148V G166P",2
"lib2","SARS-CoV-2","ACTCTGTTTAACGAAC",8,79.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39P V103S",2
"lib2","SARS-CoV-2","ACTCTTAAAGCAAGAC",3,12.66,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D98I W106E T170V",3
"lib2","SARS-CoV-2","ACTCTTACCCACCTCG",8,155.07,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","S53I D68P P82E K87M L125T P149R S164M Q176L",8
"lib2","SARS-CoV-2","ACTCTTACGAGTGTAT",6,1.2,NA,NA,NA,NA,NA,NA,"stop","D98* L125S",2
"lib2","SARS-CoV-2","ACTCTTACTCAATATT",7,5.97,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","N13Y I80F G146R",3
"lib2","SARS-CoV-2","ACTCTTACTTATTTTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R P96E E141A P149Y V153C",5
"lib2","SARS-CoV-2","ACTCTTATAGATTACT",8,53.65,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","N40K F47S W106C",3
"lib2","SARS-CoV-2","ACTCTTATTAAGTGTA",6,46.61,9.7,-1.13,0.15,2.04,1.07,0.01,">1 nonsynonymous","Y91N Y143L",2
"lib2","SARS-CoV-2","ACTCTTCCAGCGCTCA",4,83.71,10.27,-0.57,0.03,2.98,1.03,0,">1 nonsynonymous","L5T S45Q G174Q",3
"lib2","SARS-CoV-2","ACTCTTCCATGTTCGT",11,192.28,10.47,-0.37,0.04,2.96,1.01,0,">1 nonsynonymous","V37Y D97V T140I",3
"lib2","SARS-CoV-2","ACTCTTCTATTACCCG",2,56.29,10.91,0.07,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTCTTCTTTCCTCAA",12,53.66,8.13,-2.7,0.19,1.5,1.1,0.02,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","ACTCTTGAGACCAAAC",2,16.3,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G172W P177I",2
"lib2","SARS-CoV-2","ACTCTTGAGTCCACTA",9,94.17,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36W I72L T148Y N157V T170F V173I",6
"lib2","SARS-CoV-2","ACTCTTGCGTAACCCT",6,71.77,9.46,-1.37,0.04,2.93,1.1,0,">1 nonsynonymous","Y119S E141T",2
"lib2","SARS-CoV-2","ACTCTTGTTGACCAAA",2,44.1,10.16,-0.68,0.07,2.71,1.04,0,">1 nonsynonymous","Y39R K48F",2
"lib2","SARS-CoV-2","ACTCTTTAATTGCCTG",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T T85S F126I V180Y",4
"lib2","SARS-CoV-2","ACTCTTTCAACGAAGA",3,51.66,10.79,-0.05,0.04,3,1,0,">1 nonsynonymous","S36L V115R",2
"lib2","SARS-CoV-2","ACTCTTTTCTAGACAA",6,98.39,9.8,-1.04,0.08,2.42,1.05,0,">1 nonsynonymous","A81D K114M",2
"lib2","SARS-CoV-2","ACTGAAAAAAATATAT",3,23.28,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14L I28V D90V G101A",4
"lib2","SARS-CoV-2","ACTGAAAAATCTTTTA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","R16V L122V Q168*",3
"lib2","SARS-CoV-2","ACTGAAAACGTCAAAC",6,54.74,10.83,-0.01,0.05,2.89,1.12,0,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","ACTGAAAACTCATTCA",8,86.74,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19M K94V N157L K198W",4
"lib2","SARS-CoV-2","ACTGAAACAAATAGTC",12,87.2,9.65,-1.19,0.03,2.87,1.11,0,">1 nonsynonymous","N4M F126W",2
"lib2","SARS-CoV-2","ACTGAAACATGAATAT",5,1.22,NA,NA,NA,NA,NA,NA,"stop","L57* D112S P149Y F167V K199N",5
"lib2","SARS-CoV-2","ACTGAAACCTTTACCG",6,115.42,9.94,-0.89,0.08,2.22,1.02,0,">1 nonsynonymous","N4R I28E Y39R",3
"lib2","SARS-CoV-2","ACTGAAAGGACGCCGA",5,1.64,NA,NA,NA,NA,NA,NA,"stop","T140* S164R",2
"lib2","SARS-CoV-2","ACTGAAAGGTGAGGGC",7,61.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S29L V37L G86E F134L",4
"lib2","SARS-CoV-2","ACTGAAAGTTGCAAAG",5,71.6,10.47,-0.37,0.06,2.83,1.07,0,">1 nonsynonymous","S45G N130Q N151K",3
"lib2","SARS-CoV-2","ACTGAAATCCTAATTA",2,23.61,10.98,0.15,0.11,2.88,1.11,0,"1 nonsynonymous","L122E",1
"lib2","SARS-CoV-2","ACTGAACAAACTGTGT",11,94.01,6.07,-4.76,0.85,1.5,1.22,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","ACTGAACAACGAAACG",1,11.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y G86S S113I E154I",4
"lib2","SARS-CoV-2","ACTGAACACTTCGCTA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M R16W Y93S D112L",4
"lib2","SARS-CoV-2","ACTGAACATATCCGTT",10,181.57,10.21,-0.63,0.04,2.75,1.04,0,"1 nonsynonymous","R136W",1
"lib2","SARS-CoV-2","ACTGAACATCTCCATT",4,42.4,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","K94F A105S I138H",3
"lib2","SARS-CoV-2","ACTGAACCGGCTTGAA",4,74.78,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L131W Y178V T201L",3
"lib2","SARS-CoV-2","ACTGAACCTCATGATA",3,43.73,8.17,-2.66,0.37,1.5,1.02,0.05,">1 nonsynonymous","E10S K94H G116V R136N",4
"lib2","SARS-CoV-2","ACTGAACTACGACGGC",18,380.83,10.83,-0.01,0.04,2.94,1.08,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","ACTGAACTAGATCAGC",7,61.61,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N4C F12I N40H D59Y A81L Y91G I104S N107L S129D",9
"lib2","SARS-CoV-2","ACTGAACTCTAGGCGA",1,17.83,10.27,-0.57,0.08,2.85,1,0,">1 nonsynonymous","G9V T55N N130F L188Y",4
"lib2","SARS-CoV-2","ACTGAACTTATAATAG",9,0.93,NA,NA,NA,NA,NA,NA,"stop","S45Y G86L A105F S113G G152R G172*",6
"lib2","SARS-CoV-2","ACTGAAGAAAACAGAC",6,191.34,10.22,-0.62,0.03,2.91,1.06,0,"1 nonsynonymous","E76W",1
"lib2","SARS-CoV-2","ACTGAAGAACTGACGT",3,16.33,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","S139N Y159S",2
"lib2","SARS-CoV-2","ACTGAAGCCCCCGGGA",17,256.18,10.49,-0.35,0.03,2.9,1.07,0,">1 nonsynonymous","T140L Q163L S184H",3
"lib2","SARS-CoV-2","ACTGAAGCCTTTACGA",7,160.8,10.68,-0.15,0.03,2.96,1.05,0,">1 nonsynonymous","S53H D98A",2
"lib2","SARS-CoV-2","ACTGAAGGCCAAAAGA",1,30.27,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S113P R136A G146C C158L",4
"lib2","SARS-CoV-2","ACTGAAGGCGAAATTA",1,30.66,10.86,0.02,0.05,3,1.01,0,"1 nonsynonymous","S53V",1
"lib2","SARS-CoV-2","ACTGAAGTAAACGGTG",2,24.02,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T85L P177M",2
"lib2","SARS-CoV-2","ACTGAATAAAATATAT",5,129.1,10.81,-0.03,0.02,2.98,1.03,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","ACTGAATACGTTTGAA",12,62.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21I Y35R I138P P149T",4
"lib2","SARS-CoV-2","ACTGAATAGAGCCGTT",12,98.6,10.86,0.02,0.05,2.93,1.08,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","ACTGAATAGTAAACCT",8,30.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L F99L K128W",3
"lib2","SARS-CoV-2","ACTGAATATAACGTAA",17,139.58,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L95I G101C C150F G166N",4
"lib2","SARS-CoV-2","ACTGAATCCATGATAA",3,42.45,10.45,-0.38,0.08,2.98,1.07,0,">1 nonsynonymous","C61W K199A",2
"lib2","SARS-CoV-2","ACTGAATCGTCTAATG",5,8.75,NA,NA,NA,NA,NA,NA,"stop","V180*",1
"lib2","SARS-CoV-2","ACTGAATGAAGATATA",3,8.8,6,-4.84,1.43,1.5,1.08,0.01,">1 nonsynonymous","D90L N107S N118T Q144G P161N C195V",6
"lib2","SARS-CoV-2","ACTGAATGCATCACAA",1,10.93,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","W23S N30M F99T G166R",4
"lib2","SARS-CoV-2","ACTGAATGCTCGACTT",8,55.95,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","I28S A105Y F134V F167P",4
"lib2","SARS-CoV-2","ACTGAATTGGTAACAG",2,30.04,10.91,0.07,0.06,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGAATTGGTTAACA",2,2.44,NA,NA,NA,NA,NA,NA,"stop","N64H A105F N110* S129R T140* V180A",6
"lib2","SARS-CoV-2","ACTGAATTTACCAACC",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114S I138C F160H Q163H",4
"lib2","SARS-CoV-2","ACTGACAAACTCCTTG",2,13.81,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D68P C158E",2
"lib2","SARS-CoV-2","ACTGACAAAGACCAGT",4,11.03,6,-4.84,2,3,1.03,0,">1 nonsynonymous","A89R A105H P149C S184R",4
"lib2","SARS-CoV-2","ACTGACAACCTATCTG",15,735.37,9.55,-1.29,0.02,2.93,1.06,0,">1 nonsynonymous","S41D E154S Q168E",3
"lib2","SARS-CoV-2","ACTGACAGAGTGAGAA",10,187.32,6.85,-3.98,0.16,1.5,1.11,0.01,"1 nonsynonymous","Y175P",1
"lib2","SARS-CoV-2","ACTGACAGGACAAAAA",1,42.74,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I28K I72L D112T F126L",4
"lib2","SARS-CoV-2","ACTGACATAATACCGC",3,2.72,NA,NA,NA,NA,NA,NA,"stop","Y39D N92R P161*",3
"lib2","SARS-CoV-2","ACTGACATAGAAAGAA",1,10.9,10.81,-0.02,0.07,2.91,1.07,0,"1 nonsynonymous","N151H",1
"lib2","SARS-CoV-2","ACTGACATATGTTATT",1,3.67,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ACTGACCAGCTCCGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S69V G101D A105*",3
"lib2","SARS-CoV-2","ACTGACCATGGGTAAA",4,34.15,6,-4.84,1.1,3,1.13,0.01,">1 nonsynonymous","V20G T85W N110V S139L",4
"lib2","SARS-CoV-2","ACTGACCATGGTTTCA",13,77.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S29P N64P D68V G74I K87I I104N",6
"lib2","SARS-CoV-2","ACTGACCCCTCCCAGG",8,58.54,8.85,-1.98,0.11,1.74,1.11,0.01,">1 nonsynonymous","S45V F62D G83H",3
"lib2","SARS-CoV-2","ACTGACCTAACGCGGT",2,92.68,10.59,-0.25,0.04,2.93,1.06,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","ACTGACCTAAGGCTGT",1,18.78,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61A N107M R124C A145V",4
"lib2","SARS-CoV-2","ACTGACCTAGCGCAGT",2,29.53,10.11,-0.73,0.21,2.58,1.12,0.01,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","ACTGACCTCTACGAAT",3,47.86,10.03,-0.8,0.08,2.96,1.01,0,">1 nonsynonymous","N64M Q79K K87T",3
"lib2","SARS-CoV-2","ACTGACGAACCTCCTG",3,27.1,10.83,0,0.09,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGACGAGAAACGGC",6,270.58,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","E10V G51I A105Y T140S Y178S",5
"lib2","SARS-CoV-2","ACTGACGTCAATTATG",1,20.81,10.14,-0.7,0.09,2.86,1.05,0,">1 nonsynonymous","R16I S29V F47I T201E",4
"lib2","SARS-CoV-2","ACTGACTAACCAATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85R Y119T N130M",3
"lib2","SARS-CoV-2","ACTGACTACAACGATA",8,74.32,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","N24F D59I D137S P161R",4
"lib2","SARS-CoV-2","ACTGACTACGGACCAT",4,19.8,6.01,-4.82,2,1.5,1.3,0.06,">1 nonsynonymous","F8N F17L P149M",3
"lib2","SARS-CoV-2","ACTGACTACTATTGTG",11,161.61,9.89,-0.95,0.05,2.1,1.04,0,">1 nonsynonymous","N64Q L95C Q163K",3
"lib2","SARS-CoV-2","ACTGACTAGTCTGCCT",3,57.73,10.68,-0.16,0.04,2.93,1.07,0,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","ACTGACTCATAAGATA",1,33.04,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K94Q D112A",2
"lib2","SARS-CoV-2","ACTGACTCATCACGTT",13,78.88,8.39,-2.45,0.39,1.5,1,0.07,">1 nonsynonymous","P7I T15D T100S Q163P",4
"lib2","SARS-CoV-2","ACTGACTCGCCCAAGG",4,29.38,9.71,-1.12,0.12,1.99,1.07,0.01,">1 nonsynonymous","A81I D97G",2
"lib2","SARS-CoV-2","ACTGACTCGCGTCCCT",2,18.16,9.9,-0.94,0.11,2.9,1.02,0.01,"1 nonsynonymous","G74H",1
"lib2","SARS-CoV-2","ACTGACTGCCTCTCGC",15,327.66,10.77,-0.06,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGACTTCAGGTAGT",4,133.04,10.23,-0.61,0.03,2.9,1.04,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","ACTGACTTTCTGACGC",3,30.48,10.75,-0.09,0.04,2.98,1.04,0,">1 nonsynonymous","N40G Q163T",2
"lib2","SARS-CoV-2","ACTGAGAACTCCTACC",6,6.12,NA,NA,NA,NA,NA,NA,"stop","L60T G83S Y119* F126K E154* S184V H189Y",7
"lib2","SARS-CoV-2","ACTGAGAATATCCCCG",1,55.37,9.35,-1.48,0.07,2.61,1.1,0,">1 nonsynonymous","L5C K48I L60W Q84M G174L",5
"lib2","SARS-CoV-2","ACTGAGAATCCGAATG",7,18.81,6,-4.84,1.93,3,1.08,0.01,">1 nonsynonymous","D34A N64R Y121R V181P",4
"lib2","SARS-CoV-2","ACTGAGACCCTTCACA",4,1.69,NA,NA,NA,NA,NA,NA,"stop","K26S I104* S129Y",3
"lib2","SARS-CoV-2","ACTGAGACGCCATTGG",5,94.4,10.83,0,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGAGAGAAAAAGTA",9,125.74,11.04,0.21,0.03,2.91,1.09,0,"1 nonsynonymous","E154K",1
"lib2","SARS-CoV-2","ACTGAGAGCTTTATAA",6,1.02,NA,NA,NA,NA,NA,NA,"stop","F160N V180* T201F",3
"lib2","SARS-CoV-2","ACTGAGAGTCCCAAGT",1,10.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S108R N118D G166F",3
"lib2","SARS-CoV-2","ACTGAGAGTTGAAGGA",3,99.68,10.08,-0.76,0.05,2.85,1.04,0,">1 nonsynonymous","S41V L122M N151C F160E",4
"lib2","SARS-CoV-2","ACTGAGATAAAAGACG",1,6.33,6,-4.84,2,3,1.07,0,">1 nonsynonymous","K56W A105K V115R Y119K",4
"lib2","SARS-CoV-2","ACTGAGATCCAACTAG",20,181.97,10.77,-0.06,0.03,2.92,1.07,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","ACTGAGCCGTCTAACT",7,131.61,7.67,-3.17,0.22,1.5,1.16,0.01,">1 nonsynonymous","S41L S113P",2
"lib2","SARS-CoV-2","ACTGAGGATACCACAA",5,38.71,10.62,-0.22,0.08,2.89,1.12,0,">1 nonsynonymous","V37F L60R E141G",3
"lib2","SARS-CoV-2","ACTGAGGCAAGCTCAT",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M N157Y",2
"lib2","SARS-CoV-2","ACTGAGGCGACTTGTT",10,128.53,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F44P Y50L T201A",3
"lib2","SARS-CoV-2","ACTGAGGCGTAATATA",5,29.19,10.11,-0.72,0.08,2.68,1.1,0,">1 nonsynonymous","V11T N120D T140D",3
"lib2","SARS-CoV-2","ACTGAGGTCTTCCACA",2,63.79,10.26,-0.58,0.07,2.69,1.02,0,">1 nonsynonymous","V71L G196W",2
"lib2","SARS-CoV-2","ACTGAGTAACCTATTT",5,10.47,9.19,-1.65,0.22,1.74,1,0.01,">1 nonsynonymous","A14G P133G T140Y T148V",4
"lib2","SARS-CoV-2","ACTGAGTACCCAACAT",5,51.6,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S45L F62S P96L L122C V182F G196V",6
"lib2","SARS-CoV-2","ACTGAGTATGGTAGAA",1,13.65,10.7,-0.14,0.06,3,1.01,0,"1 nonsynonymous","S147M",1
"lib2","SARS-CoV-2","ACTGAGTCAAAGCCTT",8,191.37,10.88,0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGAGTCTCATGAGC",3,6.62,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","S69K V77S N130V C150V",4
"lib2","SARS-CoV-2","ACTGAGTGACGAATGC",1,14.69,9.33,-1.51,0.23,1.82,1.13,0.03,">1 nonsynonymous","T3N Y91T Q168R",3
"lib2","SARS-CoV-2","ACTGATAAAAATGGTA",5,39.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L57S A89G R136G",3
"lib2","SARS-CoV-2","ACTGATAACCTAATAA",5,9.69,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A42K D90E F99S N151L",4
"lib2","SARS-CoV-2","ACTGATAAGGGCAACG",1,1.15,NA,NA,NA,NA,NA,NA,"stop","A22V D59* R73C",3
"lib2","SARS-CoV-2","ACTGATAATATAGATT",7,3.31,NA,NA,NA,NA,NA,NA,"stop","R27N I88Y L131P G174* P191H",5
"lib2","SARS-CoV-2","ACTGATACGAACCTAT",10,78.46,6.67,-4.16,0.49,1.5,1.31,0.03,">1 nonsynonymous","I2N F99T",2
"lib2","SARS-CoV-2","ACTGATACGATGACCC",7,42.12,6,-4.84,1.38,1.5,1.17,0.01,">1 nonsynonymous","G86R K94N N109R K128E",4
"lib2","SARS-CoV-2","ACTGATAGTCAACAAA",3,27.5,7.13,-3.7,0.23,1.5,1.13,0.01,">1 nonsynonymous","G9V Y50S L188P",3
"lib2","SARS-CoV-2","ACTGATATGCACAGAT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74P D90W R124S L162S T201Q",5
"lib2","SARS-CoV-2","ACTGATCAAAACTTGG",2,27.66,10.24,-0.59,0.07,2.83,1.08,0,"1 nonsynonymous","Q84F",1
"lib2","SARS-CoV-2","ACTGATCACCAATAGT",9,108.15,9.39,-1.44,0.05,2.79,1.1,0,">1 nonsynonymous","F156I P161S",2
"lib2","SARS-CoV-2","ACTGATCAGGAAAGCT",2,21.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106G N151L K198P",3
"lib2","SARS-CoV-2","ACTGATCATAATGGTA",23,105.44,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V65E R73C",2
"lib2","SARS-CoV-2","ACTGATCATTCTTAAG",3,84.11,10.23,-0.6,0.04,2.93,1.05,0,">1 nonsynonymous","G9K A33S N64K",3
"lib2","SARS-CoV-2","ACTGATCCAGGTCCCC",2,22.85,9.24,-1.59,0.21,1.63,1.05,0.02,">1 nonsynonymous","V37F P96Q N109L P149T",4
"lib2","SARS-CoV-2","ACTGATCCTAACTAGC",3,25.02,6,-4.84,1.88,1.5,1.1,0.04,">1 nonsynonymous","I88F N107F Q163H V181L",4
"lib2","SARS-CoV-2","ACTGATCGAACTACCA",3,3.2,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACTGATCGGGTTTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M N107K N120I G155C",4
"lib2","SARS-CoV-2","ACTGATCGTCGAATTG",4,48.21,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9L C31S T55S R127I G155E G174A",6
"lib2","SARS-CoV-2","ACTGATCTCTAGTATC",4,40.13,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Q84F K87C P96W I104N L111S",5
"lib2","SARS-CoV-2","ACTGATGAGACAAAAT",9,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R C49H A89I V103P L162W",5
"lib2","SARS-CoV-2","ACTGATGCTAAGTTTA",2,17.75,9.35,-1.49,0.19,1.5,1,0.02,">1 nonsynonymous","K56T V182S",2
"lib2","SARS-CoV-2","ACTGATGGCACCAGCA",4,28.82,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12S N64M L95T",3
"lib2","SARS-CoV-2","ACTGATGGGAACTATA",3,66.81,10.74,-0.1,0.03,2.94,1.09,0,">1 nonsynonymous","I2T Y35F A81E",3
"lib2","SARS-CoV-2","ACTGATGGTTTCCCCC",3,54.49,10.76,-0.07,0.04,2.99,1.03,0,">1 nonsynonymous","N4T D75R F134Y",3
"lib2","SARS-CoV-2","ACTGATGTATCAGATC",11,65.62,6,-4.84,1.78,1.5,1.1,0.01,">1 nonsynonymous","Y50S V103K Y123V N130P",4
"lib2","SARS-CoV-2","ACTGATGTGAAGTGTA",2,16.45,8.92,-1.91,0.24,1.5,1.12,0.04,">1 nonsynonymous","A18M K87R W106T L188M",4
"lib2","SARS-CoV-2","ACTGATTAACAAAGGC",8,83.8,9.38,-1.46,0.18,1.52,1.06,0.01,">1 nonsynonymous","E10V F44V V77M",3
"lib2","SARS-CoV-2","ACTGATTCACTATTTT",3,62.28,10.84,0,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGATTCGAGACTCC",3,61.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G101I L125K G152L",3
"lib2","SARS-CoV-2","ACTGATTCTTACTACA",9,42.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82C Y93R",2
"lib2","SARS-CoV-2","ACTGATTGACAAATGC",1,7.08,10.2,-0.63,0.1,2.91,1,0,">1 nonsynonymous","G51Q V115Y T140L",3
"lib2","SARS-CoV-2","ACTGATTTCAAACAGC",1,21.63,9.11,-1.72,0.28,2.25,1.1,0.05,">1 nonsynonymous","F47T G146E",2
"lib2","SARS-CoV-2","ACTGATTTGTGACTGC",16,204.69,10.24,-0.6,0.02,2.9,1.07,0,"1 nonsynonymous","C31T",1
"lib2","SARS-CoV-2","ACTGCAAAACTGCATA",5,0.1,NA,NA,NA,NA,NA,NA,"stop","F12V N24L A33* T46P",4
"lib2","SARS-CoV-2","ACTGCAAAATGCCAAA",3,51.85,8.07,-2.76,0.37,1.5,1.01,0.05,">1 nonsynonymous","V37Y D97N S139Q L162Y",4
"lib2","SARS-CoV-2","ACTGCAAAATTCCGTA",8,182.55,10.1,-0.73,0.06,2.59,1.08,0,">1 nonsynonymous","P7L S139H",2
"lib2","SARS-CoV-2","ACTGCAAACCTAGGCA",5,37.87,6.43,-4.4,0.34,1.5,1.07,0.01,">1 nonsynonymous","S41G C49Q T55P K87G E141D A190S",6
"lib2","SARS-CoV-2","ACTGCAAAGATGAAAA",11,64.05,7.03,-3.81,0.13,1.78,1.07,0,">1 nonsynonymous","G117V P149Q T170P",3
"lib2","SARS-CoV-2","ACTGCAAATAATGAAC",9,112.32,8.52,-2.32,0.08,2.48,1.09,0,">1 nonsynonymous","S45N Y143T P191R",3
"lib2","SARS-CoV-2","ACTGCAAATTAAACGA",11,69.34,6.32,-4.52,0.55,1.5,1.19,0.02,">1 nonsynonymous","D68Q K87S L125W F134I T201Y",5
"lib2","SARS-CoV-2","ACTGCAACAACGTGAC",6,28.94,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I80C D112P E154V",3
"lib2","SARS-CoV-2","ACTGCAACTGAGTAGG",5,136.25,6.32,-4.52,0.31,1.5,1.13,0.01,">1 nonsynonymous","N118H Y143S",2
"lib2","SARS-CoV-2","ACTGCAATAGGATTTA",7,40.73,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I28E S36K F44R T85F",4
"lib2","SARS-CoV-2","ACTGCACACAAGTCTT",2,36.73,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","I72R P149C Q176K",3
"lib2","SARS-CoV-2","ACTGCACACGTAACCA",9,202.8,10.6,-0.23,0.04,2.91,1.09,0,">1 nonsynonymous","E10L V37E",2
"lib2","SARS-CoV-2","ACTGCACATCTGTCCC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","I2* L95M",2
"lib2","SARS-CoV-2","ACTGCACCTCGGCGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S41V K114R Y121P K128F Q163* K198N",6
"lib2","SARS-CoV-2","ACTGCACTCCGAGACT",2,7.64,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","C6M F44Y R73M D137V",4
"lib2","SARS-CoV-2","ACTGCAGAAATACCAA",1,15.85,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","E10I Q84W P96L N110G L131G",5
"lib2","SARS-CoV-2","ACTGCAGAGATAGATT",6,3.7,NA,NA,NA,NA,NA,NA,"stop","T55L P82L Y93L Y123V K128*",5
"lib2","SARS-CoV-2","ACTGCAGAGGTTTCTT",3,8.69,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","A14G D68W R127T N171G",4
"lib2","SARS-CoV-2","ACTGCAGGTACGAGTA",12,161.82,9.75,-1.08,0.07,2.24,1.04,0,">1 nonsynonymous","A105Y K128Y Y175F",3
"lib2","SARS-CoV-2","ACTGCAGTGAAAAGAG",9,102.27,10.21,-0.63,0.03,2.91,1.01,0,">1 nonsynonymous","L5V D97F P169S",3
"lib2","SARS-CoV-2","ACTGCATAAGAAGCCT",7,133.37,9.18,-1.66,0.07,1.92,1.09,0,">1 nonsynonymous","L57H R78N G83C G152A",4
"lib2","SARS-CoV-2","ACTGCATCTGGGAGAT",3,7.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T100P T148Y",2
"lib2","SARS-CoV-2","ACTGCATGATATATCG",1,5.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V D68R L95S D98V",4
"lib2","SARS-CoV-2","ACTGCATGCTTTCTAC",1,12.55,9.74,-1.09,0.27,1.8,1.13,0.01,">1 nonsynonymous","F17S F44Y",2
"lib2","SARS-CoV-2","ACTGCATTCATAAATA",5,25.22,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","ACTGCATTCTCCCCCA",2,11.59,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13P Y50I",2
"lib2","SARS-CoV-2","ACTGCCACCATTGTTC",4,7.1,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","ACTGCCAGTAAGAAGC",6,112.26,10.22,-0.62,0.04,2.89,1.09,0,">1 nonsynonymous","D90S G155T",2
"lib2","SARS-CoV-2","ACTGCCATGTAAATCT",8,156.96,10.31,-0.52,0.04,2.91,1.07,0,">1 nonsynonymous","R16Y F44R",2
"lib2","SARS-CoV-2","ACTGCCCCACCAGAAA",3,23.29,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V20R K26V",2
"lib2","SARS-CoV-2","ACTGCCCCCTCTTTGT",4,17.45,9.74,-1.1,0.17,1.76,1,0.02,">1 nonsynonymous","C49V I138S",2
"lib2","SARS-CoV-2","ACTGCCCCGTCGGTCG",1,19.48,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S53Y T85M G116P D137Q Q176M",5
"lib2","SARS-CoV-2","ACTGCCCGGTTAAATA",9,50.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F70L D90S",2
"lib2","SARS-CoV-2","ACTGCCCTATCTCCCC",4,22.64,9.61,-1.23,0.07,2.14,1.04,0,">1 nonsynonymous","L5T A42R D97V R124K",4
"lib2","SARS-CoV-2","ACTGCCGAAAACTCCA",4,34.24,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88C S108F I142L",3
"lib2","SARS-CoV-2","ACTGCCGCAGGGGCCC",7,88.07,8.96,-1.87,0.04,2.88,1.09,0,">1 nonsynonymous","N40E K56A P169Y G174T",4
"lib2","SARS-CoV-2","ACTGCGAACACTTAGC",2,40.23,9.51,-1.33,0.06,1.93,1.04,0,"1 nonsynonymous","A89R",1
"lib2","SARS-CoV-2","ACTGCGAAGCCATGAA",11,134.78,10.84,0,0.04,2.94,1.06,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","ACTGCGACTGACCGTT",3,13.79,7.32,-3.52,0.55,1.72,1.23,0.05,">1 nonsynonymous","T15V Y35A G101M V103M G146S",5
"lib2","SARS-CoV-2","ACTGCGATATAATCAT",6,69.78,6.33,-4.51,0.81,1.5,1.23,0.03,">1 nonsynonymous","I28G C49H E154A",3
"lib2","SARS-CoV-2","ACTGCGATTTATCAAA",4,138.61,10.41,-0.43,0.03,2.97,1.03,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","ACTGCGCCCACACGAT",7,64.46,10.49,-0.35,0.04,3,1,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","ACTGCGCTGAATTAGG",9,85.77,10.78,-0.06,0.04,2.94,1.08,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","ACTGCGGAAAAGTGAC",2,11.9,9.42,-1.42,0.1,2.92,1,0,">1 nonsynonymous","V37I S41W E154F",3
"lib2","SARS-CoV-2","ACTGCTAGTAGGCTAC",5,44.53,8.89,-1.94,0.18,1.55,1.09,0.01,">1 nonsynonymous","N1P A22L Y91H T100M",4
"lib2","SARS-CoV-2","ACTGCTCCGAGCGAAT",17,191.75,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N109A L122G R127H S139W G146R",5
"lib2","SARS-CoV-2","ACTGCTGACCAGCTAT",5,2.64,NA,NA,NA,NA,NA,NA,"stop","G9R N40* K56Y D68A R179L",5
"lib2","SARS-CoV-2","ACTGCTGAGAGCAAAT",5,90.82,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R78L F99I R179L K198Q",4
"lib2","SARS-CoV-2","ACTGCTGCAAATCCAA",1,21.99,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F70P R127C G155D",3
"lib2","SARS-CoV-2","ACTGCTGCTCTGAAAA",7,29.97,9.1,-1.74,0.17,1.97,1.07,0.01,">1 nonsynonymous","Y91S K114R E141H",3
"lib2","SARS-CoV-2","ACTGCTTAATGAGCAA",1,17.71,10.21,-0.62,0.19,2.24,1.21,0.01,">1 nonsynonymous","A14C F62T P149H",3
"lib2","SARS-CoV-2","ACTGCTTCGCAATGAC",2,19.14,10.06,-0.77,0.07,2.86,1.03,0,">1 nonsynonymous","A18E L57F",2
"lib2","SARS-CoV-2","ACTGCTTCGCCAAAAT",10,12.37,8.18,-2.65,0.29,2.98,1.17,0.03,">1 nonsynonymous","A14N Y50F R127Q E141L Y165V Y175D",6
"lib2","SARS-CoV-2","ACTGCTTTAGATAAAA",3,31.99,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","F70V V173S",2
"lib2","SARS-CoV-2","ACTGCTTTAGCTCCGA",15,285.63,10.63,-0.21,0.02,2.85,1.07,0,">1 nonsynonymous","S43D S139H",2
"lib2","SARS-CoV-2","ACTGGAAAACGCTCTA",6,60.57,10.96,0.12,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGGAAAACTCCATA",10,170.8,10.05,-0.79,0.08,2.39,1.01,0,">1 nonsynonymous","N1I F17V N24K S41Y S129T",5
"lib2","SARS-CoV-2","ACTGGAAAATCACTGA",6,7,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T15I S41H L60I P96H Y121G C150Y",6
"lib2","SARS-CoV-2","ACTGGAAATTGATGCA",1,5.45,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","N30G V65E F126T Y143L",4
"lib2","SARS-CoV-2","ACTGGAACATTATTCA",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P F62L Y178S",3
"lib2","SARS-CoV-2","ACTGGAACCTAGAATA",3,84.86,10.83,-0.01,0.06,2.99,1.04,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","ACTGGAACTTGGAGAA",5,26.9,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6S N13V T55Q I88L P149I",5
"lib2","SARS-CoV-2","ACTGGAAGCGAGGATA",13,208.83,10.83,0,0.06,2.86,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGGAAGGGTATTAA",5,41.61,10.78,-0.06,0.06,2.8,1.18,0,">1 nonsynonymous","S43I L60M",2
"lib2","SARS-CoV-2","ACTGGAAGTAGGCGCA",8,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I R16K N40K V173Y",4
"lib2","SARS-CoV-2","ACTGGAAGTGGACATG",10,166.05,10.79,-0.05,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGGAATCAGATTTT",1,45.25,10.01,-0.83,0.07,2.93,1.01,0,">1 nonsynonymous","E154I S184R",2
"lib2","SARS-CoV-2","ACTGGACACAAGATAC",1,15.11,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F17C P82K T100G",3
"lib2","SARS-CoV-2","ACTGGACAGTAAAACA",1,2.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","ACTGGACCAAGATAAC",4,19.76,9.5,-1.33,0.18,1.63,1.1,0.02,">1 nonsynonymous","P7L T100H G155W",3
"lib2","SARS-CoV-2","ACTGGACCTTACACGA",3,27.53,9.43,-1.41,0.17,1.5,1,0.01,">1 nonsynonymous","S41R P82A L122F",3
"lib2","SARS-CoV-2","ACTGGACGAAGGACAG",4,17.62,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14C K94D W106I P177T",4
"lib2","SARS-CoV-2","ACTGGACGGACTTCCT",3,21.34,6.37,-4.46,0.36,1.5,1.11,0.01,">1 nonsynonymous","N92Q F160L",2
"lib2","SARS-CoV-2","ACTGGACGGCGGCACA",6,73.25,10.53,-0.3,0.05,2.9,1.09,0,">1 nonsynonymous","R136I P191T P197A",3
"lib2","SARS-CoV-2","ACTGGACGGCTCGGGG",7,19.36,6.27,-4.56,1.15,3,1.45,0.01,">1 nonsynonymous","N1S G101S",2
"lib2","SARS-CoV-2","ACTGGACTTCACATTC",9,68.1,9.87,-0.97,0.11,1.99,1.07,0,">1 nonsynonymous","W106A K114R",2
"lib2","SARS-CoV-2","ACTGGAGAAAGTTAAT",6,134.54,7.92,-2.91,0.1,1.85,1.14,0,">1 nonsynonymous","L111D G172A",2
"lib2","SARS-CoV-2","ACTGGAGCCGGAATTT",7,73.36,10.75,-0.09,0.05,2.9,1.11,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","ACTGGAGCCTCTAGAC",1,18.1,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A14T R25V K132R G146W",4
"lib2","SARS-CoV-2","ACTGGAGTCAACACAC",2,0.89,NA,NA,NA,NA,NA,NA,"stop","N4* R25H E141F P161G",4
"lib2","SARS-CoV-2","ACTGGATACAGAAAGC",1,1.71,NA,NA,NA,NA,NA,NA,"stop","T3R T55L Y119T V153*",4
"lib2","SARS-CoV-2","ACTGGATATCTGAAAA",14,250.71,9.13,-1.71,0.03,2.94,1.08,0,">1 nonsynonymous","Q168T G174L",2
"lib2","SARS-CoV-2","ACTGGATTAAACTAAT",1,7.5,10.36,-0.48,0.17,3,1,0.01,"1 nonsynonymous","P169L",1
"lib2","SARS-CoV-2","ACTGGCAACACCGATT",1,14.97,9.71,-1.13,0.27,1.5,1.22,0.04,">1 nonsynonymous","T3F K56R V115K Y123I",4
"lib2","SARS-CoV-2","ACTGGCAACGTTATCT",1,75.44,10.52,-0.32,0.04,2.98,1.02,0,">1 nonsynonymous","T55P I138K",2
"lib2","SARS-CoV-2","ACTGGCAGAACCTTGG",1,43.62,9.93,-0.91,0.06,2.86,1.13,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","ACTGGCAGTTTGAAAA",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N4* K26T V37A S43Y K87D E141D F160L",7
"lib2","SARS-CoV-2","ACTGGCCCACTCAGAA",7,151.68,8.78,-2.06,0.07,2.77,1.11,0,">1 nonsynonymous","K26S K87V Q176L",3
"lib2","SARS-CoV-2","ACTGGCCCCCCATTTT",17,36.19,6.8,-4.03,0.52,1.5,1.27,0.03,">1 nonsynonymous","A33D K56W L95R",3
"lib2","SARS-CoV-2","ACTGGCCCCCTCGTAT",9,17.78,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","A42T F70T I88T T201R",4
"lib2","SARS-CoV-2","ACTGGCCTATCCAAAA",2,17.01,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L38M L60V A81L L111S",4
"lib2","SARS-CoV-2","ACTGGCGAACGTTTTA",1,5.21,NA,NA,NA,NA,NA,NA,"stop","A22T A81* L95A Y119E G152S L162V",6
"lib2","SARS-CoV-2","ACTGGCGATACCTGAT",6,62.93,10.57,-0.26,0.06,2.84,1.14,0,">1 nonsynonymous","V37I S43C N151Y",3
"lib2","SARS-CoV-2","ACTGGCGCGTGCTCAA",1,46.57,8.61,-2.22,0.11,3,1.04,0,">1 nonsynonymous","T148V G166F",2
"lib2","SARS-CoV-2","ACTGGCGGCCTAAAAA",6,22.85,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V37K G86N Y93W G155T",4
"lib2","SARS-CoV-2","ACTGGCGTCCGTAGTA",7,61.17,10.86,0.03,0.06,2.92,1.08,0,">1 nonsynonymous","S43Q K48M",2
"lib2","SARS-CoV-2","ACTGGCTAATTATCAA",6,46.42,9.4,-1.44,0.07,2.79,1.19,0,">1 nonsynonymous","D98Y L125V P149E Q168F",4
"lib2","SARS-CoV-2","ACTGGCTATAGTCCAT",3,57.3,8.43,-2.4,0.1,2.41,1.09,0,"1 nonsynonymous","F167M",1
"lib2","SARS-CoV-2","ACTGGCTCATAGACCA",9,150.1,10.61,-0.22,0.04,2.89,1.07,0,">1 nonsynonymous","D97G P149N K199E",3
"lib2","SARS-CoV-2","ACTGGGAAATATCCCT",5,69.56,10.84,0.01,0.04,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGGGACCAAAGTCT",19,56.84,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A33N F44I T100K N107S F156C",5
"lib2","SARS-CoV-2","ACTGGGACCTGCTCAA",1,1.22,NA,NA,NA,NA,NA,NA,"stop","A14S Y91* T100D R136C T170W",5
"lib2","SARS-CoV-2","ACTGGGAGCCTACATT",6,39.55,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T15C C158V K198T",3
"lib2","SARS-CoV-2","ACTGGGATGGTGTATA",7,110.23,10.8,-0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGGGCCATATTGTT",5,2.08,NA,NA,NA,NA,NA,NA,"stop","C6L Y91T V103*",3
"lib2","SARS-CoV-2","ACTGGGCTACCGTGGT",7,86.3,9.92,-0.91,0.1,1.99,1.06,0,">1 nonsynonymous","P82R L122F V173I",3
"lib2","SARS-CoV-2","ACTGGGGAGTTCAGCC",1,57.93,10.74,-0.1,0.02,2.93,1.04,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","ACTGGGGCAAAGCTCA",7,3,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","ACTGGGGCTAAGGGGC",3,24.75,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","Y91M P149V Y165L",3
"lib2","SARS-CoV-2","ACTGGGGTTATTCCAA",4,36.85,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T63L L131P S139N C150Q",4
"lib2","SARS-CoV-2","ACTGGGGTTCAGACTT",5,44.76,9.71,-1.12,0.05,2.6,1.01,0,"1 nonsynonymous","P161Q",1
"lib2","SARS-CoV-2","ACTGGGTAGCTAGTTT",10,186.61,9.14,-1.7,0.08,2.46,1.07,0,">1 nonsynonymous","I2F F99Y Q168T T201N",4
"lib2","SARS-CoV-2","ACTGGGTTCAGTATAC",10,127.69,8.7,-2.13,0.16,1.59,1.16,0.01,">1 nonsynonymous","P54Q T63S P82V K87C T100Y",5
"lib2","SARS-CoV-2","ACTGGTAAGCATAGAT",12,25.72,7.83,-3.01,0.25,1.5,1.04,0.03,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","ACTGGTAATGTAGCCA",1,17.42,10.02,-0.82,0.15,2.47,1.02,0.02,">1 nonsynonymous","I2R A89N",2
"lib2","SARS-CoV-2","ACTGGTACAAATATGT",7,13.82,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15I D34S K48N I88L S113A",5
"lib2","SARS-CoV-2","ACTGGTAGCGATCCCT",5,51.93,10.28,-0.56,0.04,2.88,1.06,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","ACTGGTATCAAAAAAT",1,6.78,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L95K L188M",2
"lib2","SARS-CoV-2","ACTGGTATTAATGATT",11,229.32,8.02,-2.81,0.15,1.86,1.09,0.01,">1 nonsynonymous","V77Q Y159M",2
"lib2","SARS-CoV-2","ACTGGTATTATGAAAA",10,0.1,NA,NA,NA,NA,NA,NA,"stop","T3L G9R G83C Y119* R136E C150S",6
"lib2","SARS-CoV-2","ACTGGTATTCGGTCAC",16,5.59,NA,NA,NA,NA,NA,NA,"stop","I28M D137*",2
"lib2","SARS-CoV-2","ACTGGTCGAGATAAAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E S53V F62P",3
"lib2","SARS-CoV-2","ACTGGTGCCTATTAAA",11,180.62,10.61,-0.22,0.05,2.94,1.05,0,">1 nonsynonymous","N4R E10S T148A",3
"lib2","SARS-CoV-2","ACTGGTGTGGAACAAA",6,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M R136L T170Y L183S",4
"lib2","SARS-CoV-2","ACTGGTTAAAAGGAGA",3,80.19,9.99,-0.84,0.05,2.93,1.06,0,">1 nonsynonymous","K87Q S129H R136Q",3
"lib2","SARS-CoV-2","ACTGGTTAGCTATCTA",13,133.44,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S43C S108K Q176C",3
"lib2","SARS-CoV-2","ACTGGTTGACGTACAA",11,33.09,6.13,-4.71,1.05,1.5,1.25,0.04,">1 nonsynonymous","I104G T140G N171I",3
"lib2","SARS-CoV-2","ACTGGTTGCGAAACCC",2,45.79,10.76,-0.07,0.09,2.91,1.05,0,">1 nonsynonymous","T148V T201N",2
"lib2","SARS-CoV-2","ACTGTAAAAAAATAAT",2,18.24,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","K48P C61A N109G F134P",4
"lib2","SARS-CoV-2","ACTGTAAAAGAACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25C F62I N107D N120K R127L",5
"lib2","SARS-CoV-2","ACTGTAAAATACCTGT",4,38.46,10.34,-0.5,0.06,2.9,1.04,0,">1 nonsynonymous","V37E L183V",2
"lib2","SARS-CoV-2","ACTGTAAACGTAAGCA",2,17.1,6.49,-4.35,0.94,1.5,1.3,0.06,">1 nonsynonymous","N1R P96M K128E G146V",4
"lib2","SARS-CoV-2","ACTGTAAAGACGATAA",4,124.28,9.06,-1.77,0.1,2.73,1.07,0,">1 nonsynonymous","Y91S G166A",2
"lib2","SARS-CoV-2","ACTGTAAATTGCAACG",6,68.59,10.31,-0.53,0.05,2.82,1.07,0,">1 nonsynonymous","P96Q P197K",2
"lib2","SARS-CoV-2","ACTGTAACAGGTGTCC",5,160.87,10.75,-0.09,0.03,2.96,1.06,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","ACTGTAACCAACAACC",3,67.81,9.51,-1.33,0.03,1.87,1.1,0,">1 nonsynonymous","G9K I72A",2
"lib2","SARS-CoV-2","ACTGTAACTAATAAAT",1,7.14,6,-4.84,2,3,1.06,0,">1 nonsynonymous","V20H N58I P96D N107L Q163P",5
"lib2","SARS-CoV-2","ACTGTAAGTTACTAAG",8,29.47,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V52H A89R E135C Y143L P169N",5
"lib2","SARS-CoV-2","ACTGTAAGTTTCGTCC",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F G83Q R179V",3
"lib2","SARS-CoV-2","ACTGTAATACCACTTG",4,10.11,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","I2G L95R A105R Y165V",4
"lib2","SARS-CoV-2","ACTGTAATTAATTACG",8,102.21,9.62,-1.21,0.04,1.84,1.05,0,">1 nonsynonymous","T63F W106F P149H",3
"lib2","SARS-CoV-2","ACTGTACAATAGAGTG",2,5.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ACTGTACACGCTTGAA",3,22.62,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","V32M Y50C G152V",3
"lib2","SARS-CoV-2","ACTGTACATAAATAGG",1,9.02,10.4,-0.44,0.21,2.93,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ACTGTACATTACCGTA",10,2.9,NA,NA,NA,NA,NA,NA,"stop","F99I N110*",2
"lib2","SARS-CoV-2","ACTGTACCAAGCTTAT",16,82.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D98F S113L P133V A190H",4
"lib2","SARS-CoV-2","ACTGTACCGAAAAGAA",3,4.29,NA,NA,NA,NA,NA,NA,"stop","C6S A22Y I88* D112Y P197L",5
"lib2","SARS-CoV-2","ACTGTACGGGCGAAGG",15,66.59,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L5G N92V N107H T201M",4
"lib2","SARS-CoV-2","ACTGTACTACAATTTA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","S36V P54L K56* F126S T140F",5
"lib2","SARS-CoV-2","ACTGTAGAAACTTACC",3,16.56,10.83,-0.01,0.09,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGTAGAAGAGATAC",8,77.18,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V77T C150K T201E",3
"lib2","SARS-CoV-2","ACTGTATAACAAATAA",4,28.61,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","F17V Q84P Y119V",3
"lib2","SARS-CoV-2","ACTGTATAAGCAAGAA",10,158.75,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","P177N",1
"lib2","SARS-CoV-2","ACTGTATCTAGTTCAT",9,45.61,10.6,-0.24,0.1,2.64,1.19,0,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","ACTGTATTAATATTTA",1,5.23,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","I2N Y121S L131S G146R G166R",5
"lib2","SARS-CoV-2","ACTGTCAAATCTGAGG",3,16.37,6,-4.84,2,3,1.05,0,">1 nonsynonymous","C6T P54T I142M P177Y",4
"lib2","SARS-CoV-2","ACTGTCACAATCCATA",24,208.11,9.22,-1.61,0.07,1.69,1.09,0,">1 nonsynonymous","Y66V D137S",2
"lib2","SARS-CoV-2","ACTGTCACGACTAATC",5,111.35,10.19,-0.65,0.02,2.97,1.02,0,">1 nonsynonymous","S41V F156V",2
"lib2","SARS-CoV-2","ACTGTCCCAATTCATG",8,143.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L S36N A89F",3
"lib2","SARS-CoV-2","ACTGTCCTAAAAAAAC",8,0.84,NA,NA,NA,NA,NA,NA,"stop","K48G T85* C102R K132S",4
"lib2","SARS-CoV-2","ACTGTCGAGTTAGGAC",5,69.04,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","ACTGTCGATAGCCTTT",3,72.36,10.85,0.01,0.05,2.9,1.11,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","ACTGTCGATCCATAAA",2,32.82,10.78,-0.06,0.06,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGTCGGCACTAAAA",5,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65K K87G Y119E",3
"lib2","SARS-CoV-2","ACTGTCTAATTGACGG",11,9.21,NA,NA,NA,NA,NA,NA,"stop","S53G K94E W106M L122* Q144T V182A",6
"lib2","SARS-CoV-2","ACTGTCTCCGAATGAC",2,94.32,10.71,-0.12,0.07,2.82,1.05,0,">1 nonsynonymous","S36W S129T K198E",3
"lib2","SARS-CoV-2","ACTGTCTGTTTGTCAG",4,73.55,9.81,-1.02,0.08,2.01,1.08,0,">1 nonsynonymous","F12V A81K",2
"lib2","SARS-CoV-2","ACTGTCTTAGTATGAA",3,33.77,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N120T N151Y G174I F185G",4
"lib2","SARS-CoV-2","ACTGTCTTGCCTAAAC",5,63.95,10.77,-0.07,0.06,2.8,1.21,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","ACTGTCTTGCCTTTCT",4,13.8,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N1F A42K I104N L122P",4
"lib2","SARS-CoV-2","ACTGTGAATCACAGAT",1,13.33,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V71Q V194I",2
"lib2","SARS-CoV-2","ACTGTGAGAAGGCAAG",3,63.56,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6I K94P A105F Y143T",4
"lib2","SARS-CoV-2","ACTGTGATAACGTTTA",5,31.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3E S29L L60G P149K G155M P169W",6
"lib2","SARS-CoV-2","ACTGTGATACCTTGTG",6,25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15W I80S",2
"lib2","SARS-CoV-2","ACTGTGCACCCTCCCA",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L P82T D90W D97T E135G T170G V182D",7
"lib2","SARS-CoV-2","ACTGTGCCAGGTAGAC",1,11.98,10.28,-0.56,0.09,2.84,1,0,">1 nonsynonymous","T55M P96S G152S",3
"lib2","SARS-CoV-2","ACTGTGCGACATCGTT",2,46.14,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","G51S I80G",2
"lib2","SARS-CoV-2","ACTGTGCGAGAGAGAA",3,13.93,10.85,0.01,0.1,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTGTGCTCTACTATA",1,50.58,9.16,-1.68,0.08,2.1,1.07,0,">1 nonsynonymous","V37Y P54V N107V",3
"lib2","SARS-CoV-2","ACTGTGTGTCTTACAA",3,12.59,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","Y50I R127P",2
"lib2","SARS-CoV-2","ACTGTGTTATAGAACA",2,40.9,10.89,0.06,0.06,3,1.03,0,">1 nonsynonymous","L60Y N130K",2
"lib2","SARS-CoV-2","ACTGTTAAAGGTTTTA",11,120.97,9.52,-1.32,0.07,2.12,1.03,0,">1 nonsynonymous","Y91S A145S S200V",3
"lib2","SARS-CoV-2","ACTGTTAACAACTCCA",15,25.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15L A81I Y91N I104Y S129L F160T Q168F",7
"lib2","SARS-CoV-2","ACTGTTAATTGAGGTC",14,1.3,NA,NA,NA,NA,NA,NA,"stop","K48G D90L N107* R127S",4
"lib2","SARS-CoV-2","ACTGTTACAGGCCGAG",1,7.34,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","C6D W23M N58F N92I C102W A145T",6
"lib2","SARS-CoV-2","ACTGTTAGAGAGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D68* Y121L",2
"lib2","SARS-CoV-2","ACTGTTCACACTCAGC",7,51.46,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T15P Y121V Q176S",3
"lib2","SARS-CoV-2","ACTGTTCTGCGGTCCA",9,52.88,10.04,-0.79,0.1,2.25,1.09,0,">1 nonsynonymous","R127H T140Q",2
"lib2","SARS-CoV-2","ACTGTTGAACACCGAC",5,21.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G74W D97N V103C Q168R",4
"lib2","SARS-CoV-2","ACTGTTGATGAACCCT",4,10.81,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14C K87G G101Y",3
"lib2","SARS-CoV-2","ACTGTTGTTAAACTTA",5,31.65,8.1,-2.74,0.33,1.5,1.02,0.05,">1 nonsynonymous","K26S E76R T201R",3
"lib2","SARS-CoV-2","ACTGTTGTTACTCAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","P7S Y50S A67V F99A G174*",5
"lib2","SARS-CoV-2","ACTGTTTAAATGCCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S P133C I142R T201E",4
"lib2","SARS-CoV-2","ACTGTTTACACAGCGA",9,29.52,7.35,-3.49,0.4,1.5,1,0.05,">1 nonsynonymous","L5F D34I D112L",3
"lib2","SARS-CoV-2","ACTGTTTACCTTCAGC",12,115.32,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","P7Q F99D K114L",3
"lib2","SARS-CoV-2","ACTGTTTGTGACCAGC",12,259.9,10.06,-0.77,0.04,2.8,1.05,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","ACTGTTTTAACTACAG",4,103.23,11.01,0.17,0.06,2.95,1.05,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","ACTGTTTTTGTATCGA",3,103.06,9.89,-0.95,0.07,2.5,1.02,0,">1 nonsynonymous","P7L A14E L57W",3
"lib2","SARS-CoV-2","ACTTAAAAAATTTTCC",1,47.72,6,-4.84,1.38,1.5,1.2,0.01,">1 nonsynonymous","Y50A K56R A190V",3
"lib2","SARS-CoV-2","ACTTAAAAAGCTCACG",2,43.64,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R127I T148F P161S",3
"lib2","SARS-CoV-2","ACTTAAAAATGAAAAA",13,228.93,7.12,-3.71,0.15,1.5,1.1,0.01,">1 nonsynonymous","D59R Y175T",2
"lib2","SARS-CoV-2","ACTTAAAAGATGCCCA",4,58.54,6,-4.84,1.34,1.5,1.11,0.01,">1 nonsynonymous","T46A E141R C150T",3
"lib2","SARS-CoV-2","ACTTAAACGTTTGCAG",1,29.08,10.96,0.13,0.1,2.89,1.13,0.01,">1 nonsynonymous","G51R P197S",2
"lib2","SARS-CoV-2","ACTTAAACTATCACAA",3,41.09,10.63,-0.21,0.07,2.91,1.08,0,">1 nonsynonymous","A145G G196P",2
"lib2","SARS-CoV-2","ACTTAAAGAAAATTCA",14,112.14,9.49,-1.35,0.08,2.21,1.12,0,">1 nonsynonymous","T15C G152T",2
"lib2","SARS-CoV-2","ACTTAAAGACATCAGT",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G Y165Q G172A",3
"lib2","SARS-CoV-2","ACTTAAAGACGATGTA",1,31.08,10.88,0.04,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAAAGACTATGTA",1,13.02,9.32,-1.51,0.21,2.15,1.08,0.01,">1 nonsynonymous","Q84M Y119I E141S G152F",4
"lib2","SARS-CoV-2","ACTTAAAGAGTATATT",12,40.92,9.62,-1.21,0.08,2.08,1.03,0,"1 nonsynonymous","F8D",1
"lib2","SARS-CoV-2","ACTTAAATACAAAATA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","I2L T55* G86F E141V Y178L",5
"lib2","SARS-CoV-2","ACTTAAATCAACAAAT",13,46.86,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T15D L57H P82R",3
"lib2","SARS-CoV-2","ACTTAAATGGTACACT",2,36.44,10.64,-0.2,0.08,3,1,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","ACTTAACAAATGAATA",13,115.07,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F44T T100K C150K",3
"lib2","SARS-CoV-2","ACTTAACAACGAGTAA",6,150.97,10.65,-0.19,0.03,2.98,1.03,0,">1 nonsynonymous","Y35L Q84L",2
"lib2","SARS-CoV-2","ACTTAACAATGCAGTC",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59T V77A V103A T201W",4
"lib2","SARS-CoV-2","ACTTAACACCTAGACT",14,57.2,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","P96M P133Q",2
"lib2","SARS-CoV-2","ACTTAACAGTTGATGG",8,68.76,8.6,-2.23,0.18,1.5,1.14,0.01,">1 nonsynonymous","G83C S139I P149L",3
"lib2","SARS-CoV-2","ACTTAACATAATAGAT",8,39.48,7.36,-3.47,0.52,1.5,1,0.06,">1 nonsynonymous","F44V D68K L122W E141S",4
"lib2","SARS-CoV-2","ACTTAACATGCTACGC",2,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N Y165M",2
"lib2","SARS-CoV-2","ACTTAACCAAACTCAG",10,162.78,9.9,-0.93,0.05,2.5,1.05,0,">1 nonsynonymous","S19M S129R",2
"lib2","SARS-CoV-2","ACTTAACCACTAACCA",6,15.08,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","A89L I104C",2
"lib2","SARS-CoV-2","ACTTAACCCATCTATG",3,17.72,6,-4.84,2,3,1.05,0,">1 nonsynonymous","C61I R73G Y93K W106L S113G K128Q I142W C150G",8
"lib2","SARS-CoV-2","ACTTAACGCAGAAGAC",18,256.44,10.76,-0.07,0.05,2.92,1.1,0,">1 nonsynonymous","E10S L122M",2
"lib2","SARS-CoV-2","ACTTAACGCATAACAA",8,150.71,10.26,-0.57,0.06,2.74,1,0,">1 nonsynonymous","T3I T15L",2
"lib2","SARS-CoV-2","ACTTAACGCTATAGGT",2,29.84,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95R E141T",2
"lib2","SARS-CoV-2","ACTTAACGTCCCTCAT",7,156.61,10.75,-0.08,0.04,2.95,1.03,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","ACTTAACTAACCCCGT",6,68.36,6,-4.84,2,1.5,1.2,0,">1 nonsynonymous","V37T N64K Y119W R136M G152L",5
"lib2","SARS-CoV-2","ACTTAACTAGCATAAA",3,50.97,9.67,-1.17,0.13,1.85,1.16,0.01,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","ACTTAACTAGTATACA",7,91.57,10.8,-0.04,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAAGAAAGCAACA",1,23.78,6.24,-4.6,0.7,1.5,1.05,0.03,">1 nonsynonymous","F12Y G51P N109W P149G",4
"lib2","SARS-CoV-2","ACTTAAGAAGCTTTCA",1,10.46,10.68,-0.16,0.08,3,1,0,"1 nonsynonymous","P54D",1
"lib2","SARS-CoV-2","ACTTAAGACCTAAAAA",1,6.07,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","G51L N64H S129Y F167V",4
"lib2","SARS-CoV-2","ACTTAAGACTTCCTAA",2,15.46,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","N4L A22R S129H C150V N171L",5
"lib2","SARS-CoV-2","ACTTAAGAGTTAGCTA",1,25.79,10.95,0.11,0.06,3,1.03,0,"1 nonsynonymous","L122Q",1
"lib2","SARS-CoV-2","ACTTAAGATAAAAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84* Q163H",2
"lib2","SARS-CoV-2","ACTTAAGATAGTCTCC",6,54.43,10.18,-0.65,0.03,2.89,1.12,0,">1 nonsynonymous","G166S H189N",2
"lib2","SARS-CoV-2","ACTTAAGCACTTATGG",4,202.29,10.84,0,0.05,2.93,1.09,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","ACTTAAGCGAGATAAA",2,12.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17D I88S Y123A E186V",4
"lib2","SARS-CoV-2","ACTTAAGGGGGGGCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14R D34Y L60T S129H P149Q Q168*",6
"lib2","SARS-CoV-2","ACTTAAGTAAACACCG",4,112.92,10.78,-0.06,0.03,2.9,1.09,0,"1 nonsynonymous","G83Y",1
"lib2","SARS-CoV-2","ACTTAAGTACGTATGA",6,122.65,10.86,0.02,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAATAACTCGTGC",8,155.84,10.85,0.01,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAATACCTAACCA",1,17.11,9.8,-1.04,0.19,2.05,1.08,0.02,">1 nonsynonymous","N4T V52L F99L",3
"lib2","SARS-CoV-2","ACTTAATACGAGCTTA",10,88.9,10.74,-0.1,0.05,2.94,1.08,0,"1 nonsynonymous","F160C",1
"lib2","SARS-CoV-2","ACTTAATAGCCAAATA",13,334.91,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N120Y G152F Y175G",3
"lib2","SARS-CoV-2","ACTTAATATACCTTTT",1,6.46,10.68,-0.15,0.18,2.86,1.14,0.01,">1 nonsynonymous","S43L P133E",2
"lib2","SARS-CoV-2","ACTTAATATTGAATAA",8,116.58,8.2,-2.64,0.08,2.2,1.08,0,">1 nonsynonymous","C31N I142Q",2
"lib2","SARS-CoV-2","ACTTAATCAGGCTTAA",16,282.23,10.56,-0.28,0.03,2.86,1.05,0,"1 nonsynonymous","E10V",1
"lib2","SARS-CoV-2","ACTTAATCTTTCATAA",4,112.55,10.82,-0.01,0.02,2.98,1.04,0,">1 nonsynonymous","A18S V37K",2
"lib2","SARS-CoV-2","ACTTAATGATTAACTC",5,1.63,NA,NA,NA,NA,NA,NA,"stop","F70Y P82S I88S Y159*",4
"lib2","SARS-CoV-2","ACTTAATTAACCTTTT",6,73.09,10.87,0.03,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAATTAAGGCATT",1,17.21,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7L V20A D90N D112I L122V G166L",6
"lib2","SARS-CoV-2","ACTTAATTAATAAACC",8,3.86,NA,NA,NA,NA,NA,NA,"stop","Y39* L111S",2
"lib2","SARS-CoV-2","ACTTAATTCAAATCAT",3,16.92,9.96,-0.88,0.15,2.4,1,0.01,">1 nonsynonymous","C6A A14T C61M",3
"lib2","SARS-CoV-2","ACTTAATTTAAGCCTA",10,128.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23T T140A Y178S S184D",4
"lib2","SARS-CoV-2","ACTTACAAATAATATT",3,36.18,7.16,-3.68,0.32,2.37,1.16,0.02,">1 nonsynonymous","E141P Y175D",2
"lib2","SARS-CoV-2","ACTTACAAGAATTCCT",2,98.57,8.74,-2.09,0.15,1.52,1.07,0.01,">1 nonsynonymous","F17I N107S",2
"lib2","SARS-CoV-2","ACTTACAAGAGAAAAG",3,44.87,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","V103P R179E",2
"lib2","SARS-CoV-2","ACTTACACAAGATGCT",1,52.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35S F62G R73K I88P K94H T201S",6
"lib2","SARS-CoV-2","ACTTACACGACCTGCC",11,171.28,8.42,-2.41,0.12,2.61,1.07,0,">1 nonsynonymous","D98G Y143H Q168M N171L",4
"lib2","SARS-CoV-2","ACTTACAGACTAGACT",1,54.65,10.77,-0.07,0.04,2.92,1.09,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","ACTTACAGAGTTATCT",6,120.37,10.82,-0.01,0.05,2.99,1.03,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","ACTTACAGCAATTTGC",3,89.13,8.82,-2.01,0.11,1.8,1.09,0,">1 nonsynonymous","V37S G86T",2
"lib2","SARS-CoV-2","ACTTACAGGAGGTTCA",3,8.27,6,-4.84,2,1.5,1.07,0.05,">1 nonsynonymous","N4T I104K G146I T170Y",4
"lib2","SARS-CoV-2","ACTTACAGGAGTATCA",3,34.24,10.88,0.04,0.08,2.88,1.07,0,">1 nonsynonymous","I2S V11I K199I",3
"lib2","SARS-CoV-2","ACTTACATACGTTACC",3,16,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15P N92R A105I D112K I138S",5
"lib2","SARS-CoV-2","ACTTACATCGTAATCC",3,26.99,8.81,-2.03,0.12,2.18,1.08,0.01,">1 nonsynonymous","A18T V153L S164L G174K",4
"lib2","SARS-CoV-2","ACTTACATTAAAAGGG",7,70.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7T S36M A105D",3
"lib2","SARS-CoV-2","ACTTACATTAGCCAAA",4,93.14,10.83,0,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTACATTATTAGAG",14,6.43,NA,NA,NA,NA,NA,NA,"stop","V115Y L122M F134*",3
"lib2","SARS-CoV-2","ACTTACCAACCCGCAT",7,163.66,10.85,0.02,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTACCAAGGTTATC",3,167.57,10.84,0,0.05,2.89,1.12,0,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","ACTTACCAATGGCCCA",6,67.57,8.85,-1.99,0.09,2.81,1.13,0,"1 nonsynonymous","R73E",1
"lib2","SARS-CoV-2","ACTTACCACCGCCCTA",26,180.96,9.66,-1.18,0.06,2.04,1.08,0,">1 nonsynonymous","L5R E10A A89V P149T",4
"lib2","SARS-CoV-2","ACTTACCAGAAATAGC",1,10.02,8.54,-2.29,0.27,1.54,1.09,0.02,">1 nonsynonymous","G9P K56W D98V K199V",4
"lib2","SARS-CoV-2","ACTTACCAGAGACTTT",13,170.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N58S Y93N",2
"lib2","SARS-CoV-2","ACTTACCAGCTACACG",13,322.28,10.81,-0.02,0.04,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTACCCGTGAAAAC",3,48.08,10.87,0.04,0.06,3,1,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","ACTTACCCGTTTACAC",1,28.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2L N30I A42P G51A G86Y Y178R",6
"lib2","SARS-CoV-2","ACTTACCCTCCTAGGG",1,31.49,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","N58T I104N P161L",3
"lib2","SARS-CoV-2","ACTTACCGCATGTATG",8,62.42,10.87,0.03,0.05,3,1.01,0,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","ACTTACCGCCAGTTCT",1,32.09,9.19,-1.65,0.24,1.71,1.15,0.02,">1 nonsynonymous","K94A P161S",2
"lib2","SARS-CoV-2","ACTTACCGTTGATAAA",20,82.72,6,-4.84,2,2.19,1.17,0,">1 nonsynonymous","R27C K87W W106K K132P E141R",5
"lib2","SARS-CoV-2","ACTTACCTAACCTTTA",2,58.84,8.66,-2.18,0.11,2.87,1.07,0,">1 nonsynonymous","F12L G166M",2
"lib2","SARS-CoV-2","ACTTACCTAGACGAAA",4,22.05,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","F99S L188P T201S",3
"lib2","SARS-CoV-2","ACTTACCTGTCCGAAA",14,150.34,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","P54W A89K S113N",3
"lib2","SARS-CoV-2","ACTTACCTTTTTTACT",2,40.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R16L N24M N58I F70I A192E",5
"lib2","SARS-CoV-2","ACTTACTAATGTGAAA",8,101.97,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A81K G101L P177E",3
"lib2","SARS-CoV-2","ACTTACTACCAAACGT",1,49.5,10.76,-0.07,0.05,2.93,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTTACTATACGATAA",15,111.48,7.19,-3.64,0.21,1.5,1.13,0.01,">1 nonsynonymous","F99V Q168V",2
"lib2","SARS-CoV-2","ACTTACTCGAGCTGAA",4,7.37,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3N S29Y E141T L183S",4
"lib2","SARS-CoV-2","ACTTAGAAACCCTCAA",3,55.19,10.82,-0.02,0.06,2.89,1.1,0,">1 nonsynonymous","S53Q N151F",2
"lib2","SARS-CoV-2","ACTTAGAACTCTGACA",7,216.36,10.46,-0.38,0.04,2.94,1.03,0,">1 nonsynonymous","Y39S N151I",2
"lib2","SARS-CoV-2","ACTTAGACCACTGTGA",13,145.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91D Y123G S129C F160C",4
"lib2","SARS-CoV-2","ACTTAGAGAGTTATAA",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E N40H L60Y K94S F134A Q176H H189R",7
"lib2","SARS-CoV-2","ACTTAGAGGATATACC",11,7.41,NA,NA,NA,NA,NA,NA,"stop","W106L K128*",2
"lib2","SARS-CoV-2","ACTTAGATAAATCCCG",2,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16F D75L G86I D97C",4
"lib2","SARS-CoV-2","ACTTAGATAACCCAAG",1,6.58,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","D68V I104V D112V C150K G172L",5
"lib2","SARS-CoV-2","ACTTAGCAAATTAAGG",5,98.3,8.01,-2.82,0.26,1.5,1.15,0.02,">1 nonsynonymous","Y35V N107I",2
"lib2","SARS-CoV-2","ACTTAGCAACAACGCA",2,5.14,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","T15W P96Q L131V G172R",4
"lib2","SARS-CoV-2","ACTTAGCAAGTAGTAT",1,12.34,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13V W23L F156V",3
"lib2","SARS-CoV-2","ACTTAGCACCTCAACT",5,170.07,10.26,-0.58,0.02,2.94,1.05,0,">1 nonsynonymous","I2S S53L P149Q V173G",4
"lib2","SARS-CoV-2","ACTTAGCCTCAATAAA",8,73.78,10.6,-0.23,0.03,2.92,1.05,0,">1 nonsynonymous","F44M V153E",2
"lib2","SARS-CoV-2","ACTTAGCCTGGGACAG",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R Y121I K128V S184K T201R",5
"lib2","SARS-CoV-2","ACTTAGCGACACTATA",9,45.05,6,-4.84,2,3,1.11,0,"1 nonsynonymous","W106P",1
"lib2","SARS-CoV-2","ACTTAGCGATTTGCCT",3,26.9,8.51,-2.32,0.16,2.16,1.07,0.01,">1 nonsynonymous","F99L K114G N171S",3
"lib2","SARS-CoV-2","ACTTAGCGTAGGCAAT",7,123.3,10.81,-0.03,0.06,2.92,1.08,0,"1 nonsynonymous","V32L",1
"lib2","SARS-CoV-2","ACTTAGCTACATGGCA",1,16.87,9.21,-1.63,0.09,2.88,1.02,0,">1 nonsynonymous","F47W F62T G166V",3
"lib2","SARS-CoV-2","ACTTAGGATACGAGGA",6,52.76,10.85,0.02,0.06,2.95,1.07,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","ACTTAGGATCACTTAC",2,11.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G51E S69K Q84L",3
"lib2","SARS-CoV-2","ACTTAGGCACCCAGTC",1,80.49,6,-4.84,1.96,3,1.15,0,">1 nonsynonymous","Y165R P177R",2
"lib2","SARS-CoV-2","ACTTAGGCTACCCTTA",15,0.38,NA,NA,NA,NA,NA,NA,"stop","V71L Q84* K198T",3
"lib2","SARS-CoV-2","ACTTAGGGACGCCAAA",4,6.81,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C31E T55S N107W Y143L P161V Y175I",6
"lib2","SARS-CoV-2","ACTTAGGTCATATGAA",6,2.99,NA,NA,NA,NA,NA,NA,"stop","V37M L60R L95A S113A Y121* P149L",6
"lib2","SARS-CoV-2","ACTTAGGTGAGAGACA",6,12.17,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V103A Y123I",2
"lib2","SARS-CoV-2","ACTTAGTAGCTGTCAG",14,3.75,NA,NA,NA,NA,NA,NA,"stop","D98F L122* V181T",3
"lib2","SARS-CoV-2","ACTTAGTCTATCCACA",1,59.49,10.77,-0.07,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTAGTTAGTTTTAG",1,1.34,NA,NA,NA,NA,NA,NA,"stop","A33G D98W V103C S108* L122R N130V R136I G146L C158M",9
"lib2","SARS-CoV-2","ACTTAGTTATCTGGCC",1,34.14,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N4G F12V N30R T55E N107G E141C",6
"lib2","SARS-CoV-2","ACTTAGTTCATAGAGA",11,136.22,8.45,-2.38,0.15,2.56,1.09,0.01,">1 nonsynonymous","P54R D98E Y119C K132C",4
"lib2","SARS-CoV-2","ACTTATAAAAACCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V P54Q I88C V103R C158G",5
"lib2","SARS-CoV-2","ACTTATAAACTATCAA",4,117.75,9.14,-1.7,0.08,2.87,1.1,0,">1 nonsynonymous","N58Y T100V S147P F156E",4
"lib2","SARS-CoV-2","ACTTATAACGGACCCG",12,55.43,6.54,-4.29,0.51,1.5,1.2,0.03,"1 nonsynonymous","F99P",1
"lib2","SARS-CoV-2","ACTTATAAGACCCAAA",8,0.27,NA,NA,NA,NA,NA,NA,"stop","L5V Y119*",2
"lib2","SARS-CoV-2","ACTTATAAGCGGGATA",5,28.91,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N92H I142D",2
"lib2","SARS-CoV-2","ACTTATACAGACTACC",17,228.85,8.3,-2.54,0.15,1.5,1.1,0.01,">1 nonsynonymous","V11L Y178D",2
"lib2","SARS-CoV-2","ACTTATACGAGCATGA",7,105.63,8.9,-1.94,0.09,2.51,1.16,0,">1 nonsynonymous","T46V A145N V173L",3
"lib2","SARS-CoV-2","ACTTATACTCTACACG",4,6.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M S164L V181L",3
"lib2","SARS-CoV-2","ACTTATAGATCAACGT",6,170.14,10.83,0,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTATAGCATATAGT",5,24.71,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103R L122H K132P K199I",4
"lib2","SARS-CoV-2","ACTTATATAATTAAAA",2,20.33,9.62,-1.22,0.11,1.75,1.05,0.01,">1 nonsynonymous","G51V P191I",2
"lib2","SARS-CoV-2","ACTTATATATTTAACC",1,30.5,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y119H S139V F167A",3
"lib2","SARS-CoV-2","ACTTATATCCTACTGA",12,91.95,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","Q84T F134E P161N G172W",4
"lib2","SARS-CoV-2","ACTTATATTCATGAAT",12,0.93,NA,NA,NA,NA,NA,NA,"stop","L5F N30* S41D P133L E141L",5
"lib2","SARS-CoV-2","ACTTATATTCGCCAAT",12,71.83,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N92F F99E I142R",3
"lib2","SARS-CoV-2","ACTTATATTGCCGAGC",16,59.63,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N64I C102K T201R",3
"lib2","SARS-CoV-2","ACTTATCAACGCACCT",3,27.3,9.2,-1.63,0.17,2.53,1.04,0.01,">1 nonsynonymous","T55P D98P F156T",3
"lib2","SARS-CoV-2","ACTTATCAAGAAGGAA",7,165.86,10.59,-0.24,0.03,2.97,1.03,0,">1 nonsynonymous","G83C G152S",2
"lib2","SARS-CoV-2","ACTTATCATATAAGAT",5,10.35,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S53M E76P V103T S147Y C150F",5
"lib2","SARS-CoV-2","ACTTATCCAAACCTAC",3,39.87,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V52T N107T P149T",3
"lib2","SARS-CoV-2","ACTTATCCGAAATCGT",4,47.58,8.92,-1.91,0.15,1.62,1.08,0.01,">1 nonsynonymous","S36L W106V T148Y",3
"lib2","SARS-CoV-2","ACTTATCCGCGAGGAT",7,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K A42I I88S G146Y P149L T201S",6
"lib2","SARS-CoV-2","ACTTATCCGGTCCCGC",2,72.25,10.66,-0.18,0.05,2.97,1.04,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","ACTTATCTAGATACCT",19,254.28,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C31M C49T V52L D97V Q176H",5
"lib2","SARS-CoV-2","ACTTATCTATACTCCT",15,146.79,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P161A Y178R",2
"lib2","SARS-CoV-2","ACTTATGCCTAGAAAT",1,78.51,8.97,-1.87,0.11,2.64,1.08,0,">1 nonsynonymous","F12V L57T L125S",3
"lib2","SARS-CoV-2","ACTTATGCTATTCAAA",4,25.46,10.86,0.02,0.08,2.88,1.14,0,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","ACTTATGTATATTGAG",1,8.5,10.33,-0.51,0.19,2.48,1.08,0.01,">1 nonsynonymous","E10P T15M",2
"lib2","SARS-CoV-2","ACTTATTAAATACCAG",6,25.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R P54S N107G Y123I",4
"lib2","SARS-CoV-2","ACTTATTCCCGGAGGA",13,3.51,NA,NA,NA,NA,NA,NA,"stop","N13G Q176*",2
"lib2","SARS-CoV-2","ACTTATTCTCCGTAAC",9,112.79,10.78,-0.05,0.06,2.89,1.11,0,"1 nonsynonymous","F44Y",1
"lib2","SARS-CoV-2","ACTTATTCTTAGCGAA",2,54.92,6,-4.84,1.35,1.5,1.25,0.02,">1 nonsynonymous","V20R A67G C102I G174Y",4
"lib2","SARS-CoV-2","ACTTATTGATCTTATC",2,0,NA,NA,NA,NA,NA,NA,"stop","A33R Y143* T148K G174*",4
"lib2","SARS-CoV-2","ACTTATTGTCTATACA",8,98.39,10.83,0,0.04,2.92,1.09,0,">1 nonsynonymous","R16I E154Q S200A",3
"lib2","SARS-CoV-2","ACTTATTTAGCTAAGT",4,31.22,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F17A S45R K114N D137S K198I",5
"lib2","SARS-CoV-2","ACTTATTTGGAGCTCT",1,16.32,10.86,0.03,0.11,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTCAAAAAAGAAAC",6,0.02,NA,NA,NA,NA,NA,NA,"stop","F47M P133* A190T",3
"lib2","SARS-CoV-2","ACTTCAAAAAATAACG",9,83.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50T L57I T85K F99K G146S G166W",6
"lib2","SARS-CoV-2","ACTTCAAACAATAGAC",4,31.91,10.39,-0.44,0.08,2.9,1.11,0,"1 nonsynonymous","I142H",1
"lib2","SARS-CoV-2","ACTTCAAATCCGTCAT",1,10.08,9.13,-1.71,0.08,3,1.04,0.01,"1 nonsynonymous","T170C",1
"lib2","SARS-CoV-2","ACTTCAAATTAGAATA",13,119.59,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6N L38K K48E A81Y G86L",5
"lib2","SARS-CoV-2","ACTTCAACCAAAAATT",6,54.62,10.3,-0.53,0.09,2.79,1,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","ACTTCAATAGAAACTG",3,16.76,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N1F F44C V103N P149H",4
"lib2","SARS-CoV-2","ACTTCAATATATAAGT",15,238.11,10.14,-0.69,0.03,2.81,1.06,0,">1 nonsynonymous","P7I K128T",2
"lib2","SARS-CoV-2","ACTTCACATATAAACG",2,64.53,10.72,-0.12,0.05,2.91,1.1,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","ACTTCACCTCTAATGC",9,51.79,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","E10A S113L R136I",3
"lib2","SARS-CoV-2","ACTTCACTCCTTTCTA",1,12.71,6.97,-3.86,1.39,3,1.07,0.04,">1 nonsynonymous","F47V P82V N110V I138P V180F K199M",6
"lib2","SARS-CoV-2","ACTTCACTGCATGCCG",5,139.02,10.24,-0.59,0.04,2.82,1.06,0,">1 nonsynonymous","A42T S129W P149A",3
"lib2","SARS-CoV-2","ACTTCACTGCTTAAAG",13,86.67,6,-4.84,0.95,1.5,1.22,0.01,">1 nonsynonymous","C49L L95H H189Y",3
"lib2","SARS-CoV-2","ACTTCACTTATTCGAA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T Y35K G101W E186G",4
"lib2","SARS-CoV-2","ACTTCAGAAAAACCAA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","L38* T148R V182S",3
"lib2","SARS-CoV-2","ACTTCAGAAAGAAACG",5,73.5,8.52,-2.32,0.13,1.63,1.09,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","ACTTCAGACTACGGTA",1,17.95,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V65E K87R G146C",3
"lib2","SARS-CoV-2","ACTTCAGATTCTCTAT",1,7.07,NA,NA,NA,NA,NA,NA,"stop","I72* Y165P T201L",3
"lib2","SARS-CoV-2","ACTTCAGGCAAAGTTG",1,31.27,10.76,-0.08,0.05,2.93,1.07,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","ACTTCAGGCCGTGCCT",15,90.51,6,-4.84,2,3,1.2,0,">1 nonsynonymous","K48C P96H I142D",3
"lib2","SARS-CoV-2","ACTTCAGTAGACAAAA",1,39.58,10.88,0.04,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTCATAATAGCACG",2,11.9,10.71,-0.12,0.06,3,1.04,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","ACTTCATAGTTTTTTT",5,23.72,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","F62H F99N",2
"lib2","SARS-CoV-2","ACTTCATGATCATCTT",18,229.05,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y21A D59N T148Y S164R Q176H",5
"lib2","SARS-CoV-2","ACTTCATTAACTTGCA",2,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T A81C Y91S",3
"lib2","SARS-CoV-2","ACTTCATTTAACCCTA",3,40.4,10.96,0.13,0.06,2.98,1.03,0,">1 nonsynonymous","Y39F K198G",2
"lib2","SARS-CoV-2","ACTTCATTTGCTCCTC",4,20.94,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G51Y G86R I104S Y165A",4
"lib2","SARS-CoV-2","ACTTCCAAACGCCTAA",13,195.34,10.71,-0.13,0.04,2.93,1.09,0,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","ACTTCCAAATATTCAA",4,1.46,NA,NA,NA,NA,NA,NA,"stop","V65* I88G",2
"lib2","SARS-CoV-2","ACTTCCAACCTTAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107M N118E T140S",3
"lib2","SARS-CoV-2","ACTTCCAATTACCTTA",4,88.71,8.45,-2.39,0.12,3,1.07,0.01,"1 nonsynonymous","N157R",1
"lib2","SARS-CoV-2","ACTTCCACATATAAAG",7,69.18,10.57,-0.26,0.06,2.92,1.09,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","ACTTCCACTCATATAG",1,12.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A105M V180Q T201V",3
"lib2","SARS-CoV-2","ACTTCCAGACGAATGT",1,9.57,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y121G G146I",2
"lib2","SARS-CoV-2","ACTTCCAGAGATAACC",5,17.87,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C6G S45W C61M S69Q L162S",5
"lib2","SARS-CoV-2","ACTTCCATAACCATCA",1,42.43,10.06,-0.77,0.09,2.78,1.12,0,">1 nonsynonymous","L5V V11L S53H S129R F134S",5
"lib2","SARS-CoV-2","ACTTCCATTTTCTCCG",3,46.68,9.2,-1.63,0.15,1.51,1.21,0.01,">1 nonsynonymous","E10L T55S F99L",3
"lib2","SARS-CoV-2","ACTTCCCAAACAGAAG",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F A33Y L122P",3
"lib2","SARS-CoV-2","ACTTCCCCAAAATTTC",1,8.65,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L5K T46R N107W R127N C158G",5
"lib2","SARS-CoV-2","ACTTCCCCAGCCACAG",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32W I72Y V77R I104E I138L",5
"lib2","SARS-CoV-2","ACTTCCCGACCCCCCT",3,20.18,10.79,-0.05,0.09,3,1.02,0,">1 nonsynonymous","T55L A192L",2
"lib2","SARS-CoV-2","ACTTCCCGCCACCGAT",10,97.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L95P C102V L131A F156C",4
"lib2","SARS-CoV-2","ACTTCCGAAACGACAA",3,52.48,6.3,-4.53,0.6,1.5,1.15,0.02,">1 nonsynonymous","C6M S36C T140L E154Y",4
"lib2","SARS-CoV-2","ACTTCCGAACATACCA",1,16.88,10.09,-0.75,0.12,2.75,1.01,0,">1 nonsynonymous","C6Y V37I C61G",3
"lib2","SARS-CoV-2","ACTTCCGAGAAATAGC",4,38.67,6,-4.84,2,2.76,1.17,0.01,">1 nonsynonymous","A18K N107G E141W P177R",4
"lib2","SARS-CoV-2","ACTTCCGATCAAAGCA",2,24.32,10.93,0.09,0.07,2.97,1.04,0,"1 nonsynonymous","V173M",1
"lib2","SARS-CoV-2","ACTTCCGGAAACACAT",7,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y Y93T N120F",3
"lib2","SARS-CoV-2","ACTTCCGGACGCGACA",5,28.91,6,-4.84,2,1.7,1.27,0.02,">1 nonsynonymous","L95A E141L",2
"lib2","SARS-CoV-2","ACTTCCGGCTTCCACC",2,14.11,10.87,0.03,0.03,2.99,1.01,0,">1 nonsynonymous","G146S T201A",2
"lib2","SARS-CoV-2","ACTTCCTACAGAACCT",3,61.76,8.12,-2.71,0.15,1.74,1.07,0.01,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","ACTTCCTCTGTGTCTA",1,81.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5G C61F N157Y Q168N",4
"lib2","SARS-CoV-2","ACTTCCTGACATTGAT",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S45C E141S C158A",4
"lib2","SARS-CoV-2","ACTTCCTGATCATATA",8,16.08,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","P82V E141Y E186I",3
"lib2","SARS-CoV-2","ACTTCCTGGAGCACCT",3,101.1,10.04,-0.8,0.06,2.74,1.04,0,">1 nonsynonymous","G9K G116S K128L",3
"lib2","SARS-CoV-2","ACTTCGAATACCAGTG",3,50.45,9.93,-0.91,0.07,2.32,1.04,0,">1 nonsynonymous","S41R I80V D98K A190V",4
"lib2","SARS-CoV-2","ACTTCGAATTAAATAA",7,31.71,10.21,-0.62,0.06,2.8,1.09,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","ACTTCGAATTCATAGA",7,36.43,7.77,-3.07,0.37,1.5,1.21,0.04,">1 nonsynonymous","A105F R136L",2
"lib2","SARS-CoV-2","ACTTCGACCACCGTGG",2,0.14,NA,NA,NA,NA,NA,NA,"stop","D68G A105G F160*",3
"lib2","SARS-CoV-2","ACTTCGACTCTTGTTA",13,121.4,6.94,-3.89,0.33,1.5,1.17,0.02,">1 nonsynonymous","P96F H189L",2
"lib2","SARS-CoV-2","ACTTCGAGTATTTGAA",13,219.25,6.39,-4.45,0.45,1.5,1.16,0.02,">1 nonsynonymous","C61W D68V S113G P149M",4
"lib2","SARS-CoV-2","ACTTCGATAATCTGAT",5,24.71,8.86,-1.98,0.14,1.93,1.05,0.01,">1 nonsynonymous","I88L Q144T",2
"lib2","SARS-CoV-2","ACTTCGATCACAATGC",9,43.45,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D90I V103I N151I N171K",4
"lib2","SARS-CoV-2","ACTTCGCCTAATATCG",7,126.35,10.98,0.15,0.06,2.9,1.1,0,"1 nonsynonymous","S43Q",1
"lib2","SARS-CoV-2","ACTTCGGCCTTTAAAT",5,0.91,NA,NA,NA,NA,NA,NA,"stop","Y35A G174W T201*",3
"lib2","SARS-CoV-2","ACTTCGGGTCTACGTT",8,37.74,6,-4.84,2,3,1.06,0,">1 nonsynonymous","F62S Y93L G155V P169N Y178H",5
"lib2","SARS-CoV-2","ACTTCGGTTGCAGGCT",4,81.35,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y123T I138A G155V A190T",4
"lib2","SARS-CoV-2","ACTTCGTAAGACTAAA",1,67.83,10.79,-0.04,0.04,2.97,1.05,0,">1 nonsynonymous","N24K N130Y",2
"lib2","SARS-CoV-2","ACTTCGTAATACACAA",20,163.22,10.59,-0.25,0.03,2.94,1.02,0,">1 nonsynonymous","R136M T201N",2
"lib2","SARS-CoV-2","ACTTCTAAAAATTATA",6,9.81,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","C6F S41L V65S T170I",4
"lib2","SARS-CoV-2","ACTTCTAATGTAAAGA",12,60.38,6.11,-4.72,0.52,1.5,1.16,0.01,">1 nonsynonymous","T15S Y50F V77A V103F",4
"lib2","SARS-CoV-2","ACTTCTACTCCAGCAG",2,2.18,NA,NA,NA,NA,NA,NA,"stop","A33N A81* N157S",3
"lib2","SARS-CoV-2","ACTTCTACTGCCGCAT",6,79.32,9.78,-1.05,0.1,2.25,1.04,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","ACTTCTCCCGATCAGT",7,86.12,10.85,0.01,0.04,2.9,1.1,0,">1 nonsynonymous","Y35M Y91F",2
"lib2","SARS-CoV-2","ACTTCTCGAAAACTTC",8,170.74,10.35,-0.48,0.05,2.83,1.1,0,"1 nonsynonymous","A22I",1
"lib2","SARS-CoV-2","ACTTCTGACAGAGCCA",2,25.38,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6I A33R V37D A89R N120L F156D",6
"lib2","SARS-CoV-2","ACTTCTGAGTAATAAA",4,49.86,10.78,-0.06,0.05,2.99,1,0,"1 nonsynonymous","S36Q",1
"lib2","SARS-CoV-2","ACTTCTGGATTTCGGA",4,34.44,10.2,-0.63,0.08,2.75,1.03,0,">1 nonsynonymous","F62K K87M S164M",3
"lib2","SARS-CoV-2","ACTTCTTACCTTCCTG",5,38.42,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S41T D68W K87Q Y143V",4
"lib2","SARS-CoV-2","ACTTCTTAGATGCCTG",2,9.46,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","V37T I88R",2
"lib2","SARS-CoV-2","ACTTCTTCATACATTA",4,68.09,10.83,0,0.05,2.89,1.1,0,">1 nonsynonymous","L5K S36L",2
"lib2","SARS-CoV-2","ACTTGAAAAATATCAA",1,29.7,7.37,-3.46,0.32,1.5,1.16,0.02,">1 nonsynonymous","C6V T85L P96S",3
"lib2","SARS-CoV-2","ACTTGAAAAGCACATC",4,20.07,6,-4.84,1.1,3,1.04,0,">1 nonsynonymous","I2A R27T S36M T46S G86R Y93N",6
"lib2","SARS-CoV-2","ACTTGAAAATGTCTAT",2,29.16,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V20T D75L D137Y",3
"lib2","SARS-CoV-2","ACTTGAAACATTATCT",11,132.4,10.79,-0.05,0.07,2.92,1.08,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","ACTTGAAATGTAGCGT",3,47.8,10.75,-0.09,0.07,2.97,1.05,0,"1 nonsynonymous","L5W",1
"lib2","SARS-CoV-2","ACTTGAACAACACCTC",7,2.78,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","ACTTGAACCAGAACAT",6,20.88,9.34,-1.49,0.42,1.5,1.06,0.08,">1 nonsynonymous","N1E F8G Y123A",3
"lib2","SARS-CoV-2","ACTTGAACCAGTCTAC",5,0.53,NA,NA,NA,NA,NA,NA,"stop","N4W A42I D59* F156T G172V",5
"lib2","SARS-CoV-2","ACTTGAACTACTACCA",6,0.25,NA,NA,NA,NA,NA,NA,"stop","F12K S129* C150F",3
"lib2","SARS-CoV-2","ACTTGAACTCCCAGAA",9,100.61,7.82,-3.01,0.33,1.5,1.02,0.04,">1 nonsynonymous","L38Y C102L",2
"lib2","SARS-CoV-2","ACTTGAACTTCTCTGA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89M N120D G152M G174Y",4
"lib2","SARS-CoV-2","ACTTGAAGTCGACACG",4,90.3,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S41P I142S F160D F167A",4
"lib2","SARS-CoV-2","ACTTGAAGTTTTATTT",8,88.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E P54W D59P D112T",4
"lib2","SARS-CoV-2","ACTTGAATATACTTGC",3,2.09,NA,NA,NA,NA,NA,NA,"stop","C102* L122I G166Q",3
"lib2","SARS-CoV-2","ACTTGAATCGACGTTT",2,22.27,10.82,-0.01,0.05,2.91,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTTGAATGAAACGAT",3,73.74,10.65,-0.19,0.04,2.94,1.08,0,">1 nonsynonymous","C61P T140R",2
"lib2","SARS-CoV-2","ACTTGAATGATGAAAT",6,16.02,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D59K I104T V173I R179E",4
"lib2","SARS-CoV-2","ACTTGAATGTTCTTCA",2,26.56,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y91C D137M Q176L",3
"lib2","SARS-CoV-2","ACTTGAATTCGTTAAT",7,56.54,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S36M I88M L95E",3
"lib2","SARS-CoV-2","ACTTGACAAAAGGAGT",1,10.99,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99G N110G G174L",3
"lib2","SARS-CoV-2","ACTTGACCTTAACTTG",16,0.95,NA,NA,NA,NA,NA,NA,"stop","T15* I104N",2
"lib2","SARS-CoV-2","ACTTGACGGACGATGT",2,37.96,10.71,-0.12,0.04,2.94,1.03,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","ACTTGACGTCACATCA",5,36.19,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","S36G C49A V103G Y175R",4
"lib2","SARS-CoV-2","ACTTGACTAAATCTCA",3,106.6,10.78,-0.06,0.04,3,1.02,0,">1 nonsynonymous","V37F D90F",2
"lib2","SARS-CoV-2","ACTTGAGAAAAAACTG",1,22.77,9.83,-1.01,0.05,2.74,1.01,0,">1 nonsynonymous","C31A L60C",2
"lib2","SARS-CoV-2","ACTTGAGAACTGAACG",2,126.71,10.3,-0.53,0.03,2.89,1.06,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","ACTTGAGTAACTTAAC",12,5.46,NA,NA,NA,NA,NA,NA,"stop","Y35P K114* L162E",3
"lib2","SARS-CoV-2","ACTTGATAACCTGTCT",4,0,NA,NA,NA,NA,NA,NA,"stop","V11* I88V R136T T201S",4
"lib2","SARS-CoV-2","ACTTGATACTGTAAAA",8,106.07,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C61W W106F S129Y D137T P177R",5
"lib2","SARS-CoV-2","ACTTGATAGAGGATTC",3,18.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5W S41G C61W T100L V173L Y178D",6
"lib2","SARS-CoV-2","ACTTGATCCCACGTTA",5,60.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23I T46G G74I R136P",4
"lib2","SARS-CoV-2","ACTTGATCGTCCACTC",1,20.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5P V11S S29K P82K V103S L122E P133L",7
"lib2","SARS-CoV-2","ACTTGATGACAAGATT",11,98.56,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1C S43N T46K D68N S108K N120H N157I V181K",8
"lib2","SARS-CoV-2","ACTTGATGCCGGTTAG",10,42.43,8.37,-2.47,0.17,1.61,1.2,0.01,">1 nonsynonymous","P7L A22M N58D N107A K198M",5
"lib2","SARS-CoV-2","ACTTGATTAGGATCGA",11,98.97,8.5,-2.34,0.2,1.5,1.09,0.01,">1 nonsynonymous","S45Y D97E L162T",3
"lib2","SARS-CoV-2","ACTTGATTGCTTTATA",3,47.3,10.9,0.06,0.08,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTGCAAAACAGAGG",6,0.39,NA,NA,NA,NA,NA,NA,"stop","L5V I28W S69* Y175* K199I",5
"lib2","SARS-CoV-2","ACTTGCACTAAACGTA",1,15.59,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G83H N107T G117C Y175E",4
"lib2","SARS-CoV-2","ACTTGCAGGGGCCACA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2N F17D I138*",3
"lib2","SARS-CoV-2","ACTTGCATACACGAAT",4,85.78,10.01,-0.83,0.08,2.52,1.03,0,">1 nonsynonymous","Y35F P133Y G152R",3
"lib2","SARS-CoV-2","ACTTGCCAACAAACTT",2,119.16,10.06,-0.77,0.04,2.79,1.08,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","ACTTGCCAATGAGGCA",3,15.29,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3P F99N L125Y I142Y C195M",5
"lib2","SARS-CoV-2","ACTTGCCCAAGATCTT",9,90.61,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A89C T140S Y165Q",3
"lib2","SARS-CoV-2","ACTTGCCCTTCTCCTT",6,40.7,6.97,-3.86,0.53,1.5,1.16,0.06,">1 nonsynonymous","S43M G117Y F134A I142T N171I",5
"lib2","SARS-CoV-2","ACTTGCCGATCCTTTA",4,47.73,9.69,-1.14,0.07,2.22,1.07,0,">1 nonsynonymous","A89Y I138V",2
"lib2","SARS-CoV-2","ACTTGCCTATGCAAGA",1,36.45,10.71,-0.13,0.08,2.75,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTGCCTCTTGAAAC",4,110.84,10.84,0.01,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTGCGATCCTCCAT",7,103.56,10.7,-0.13,0.03,2.94,1.08,0,">1 nonsynonymous","I2A C61Q L95V",3
"lib2","SARS-CoV-2","ACTTGCTAACCGGTAC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","W23L S43Y V77D G83* I88E",5
"lib2","SARS-CoV-2","ACTTGCTCACAATCCA",1,15.84,10.94,0.1,0.08,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTGCTGATCTGAGG",6,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97K F126V R179I S184V",4
"lib2","SARS-CoV-2","ACTTGGAACGCCCACA",3,21.92,9.04,-1.79,0.2,2.51,1.15,0.01,">1 nonsynonymous","A14E C31P K87T D98E F134L",5
"lib2","SARS-CoV-2","ACTTGGAACGTTCGTT",1,4.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","ACTTGGACGATAAAAA",4,69.57,8.55,-2.29,0.05,2.77,1.06,0,">1 nonsynonymous","P54S C61L G117Y",3
"lib2","SARS-CoV-2","ACTTGGAGCATGAGCC",5,60.51,8.24,-2.59,0.09,2.78,1.06,0,">1 nonsynonymous","V37D Y143N",2
"lib2","SARS-CoV-2","ACTTGGCAACTTCGAA",12,151.08,10.72,-0.12,0.04,2.92,1.1,0,">1 nonsynonymous","Y66T Q163S",2
"lib2","SARS-CoV-2","ACTTGGGAAAGGAGGA",5,1.26,NA,NA,NA,NA,NA,NA,"stop","S53* P82V K128S A192N",4
"lib2","SARS-CoV-2","ACTTGGGAATTCAGCA",10,6.45,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","ACTTGGGAGTAAATGA",2,54.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V20Q N64A D90I Y175M",4
"lib2","SARS-CoV-2","ACTTGGGGGTAAATTA",4,66.52,9.41,-1.43,0.11,1.77,1.11,0.01,">1 nonsynonymous","V11G K56R T63Q S184Y",4
"lib2","SARS-CoV-2","ACTTGGGTCTATTAAA",6,1.51,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib2","SARS-CoV-2","ACTTGGTCATACTCCT",4,18.6,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","G86D S113K K132V D137S",4
"lib2","SARS-CoV-2","ACTTGGTGCGGTGCAA",9,165.78,10.57,-0.27,0.04,2.93,1.03,0,">1 nonsynonymous","F62L T140G",2
"lib2","SARS-CoV-2","ACTTGGTTGTCCACTT",2,26.48,9.1,-1.73,0.16,1.5,1.17,0.01,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","ACTTGTAAATGTAGGG",5,45.59,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E135L R179G",2
"lib2","SARS-CoV-2","ACTTGTATTGAGAATG",2,86.31,10.7,-0.13,0.04,2.96,1.02,0,"1 nonsynonymous","D34N",1
"lib2","SARS-CoV-2","ACTTGTATTGCATCTT",3,8.55,10.79,-0.05,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTGTCCAAATTTTT",3,35.36,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L5S G101S N107E",3
"lib2","SARS-CoV-2","ACTTGTCGCAATGCAA",4,23.31,10.18,-0.65,0.14,2.44,1.03,0.01,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","ACTTGTCTCCTAGGAC",7,88.23,10.45,-0.38,0.03,2.91,1.08,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","ACTTGTGAATCACTCA",20,91.05,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N4W A42T D137R F160V",4
"lib2","SARS-CoV-2","ACTTGTGATCTAAGAA",3,45.59,10.53,-0.3,0.04,2.93,1.08,0,">1 nonsynonymous","N40K V52L S53P C61V S164P",5
"lib2","SARS-CoV-2","ACTTGTGGATCACAAT",1,93.64,10.86,0.02,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ACTTGTGTTCAACAAA",11,204.97,8.85,-1.99,0.12,1.5,1.06,0.01,">1 nonsynonymous","N1Q G86T",2
"lib2","SARS-CoV-2","ACTTGTGTTTACACAA",4,20.19,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","W23D F99K",2
"lib2","SARS-CoV-2","ACTTGTTACCCCGAAT",2,7.54,6,-4.84,2,3,1.05,0,">1 nonsynonymous","R16P W23R Y121Q",3
"lib2","SARS-CoV-2","ACTTGTTCATCGATGT",1,25.69,10.33,-0.51,0.06,2.89,1.03,0,">1 nonsynonymous","C6V T201S",2
"lib2","SARS-CoV-2","ACTTGTTGCCAAATTT",17,141.99,6,-4.84,0.67,1.5,1.2,0.01,">1 nonsynonymous","P7V S45K D97C G166D",4
"lib2","SARS-CoV-2","ACTTGTTGTTTTCGGC",2,11.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9F W23S C61K",3
"lib2","SARS-CoV-2","ACTTGTTTTTAAATCG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","C6* A89V F99*",3
"lib2","SARS-CoV-2","ACTTTAAATAAATCAA",3,11.25,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","W23L Y91A",2
"lib2","SARS-CoV-2","ACTTTAAATAATACGA",6,2.62,NA,NA,NA,NA,NA,NA,"stop","A14S F99I S129* N171E Y175L",5
"lib2","SARS-CoV-2","ACTTTAACAAATCGCA",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16M T201N",2
"lib2","SARS-CoV-2","ACTTTAACAAGACAAT",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67N R78L L122D",3
"lib2","SARS-CoV-2","ACTTTAACCTGTAGGA",7,137.37,10.86,0.02,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTAACTGGGATTC",1,32.22,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T55K G86V Y175V",3
"lib2","SARS-CoV-2","ACTTTAAGATCAGCAA",8,86.74,10.61,-0.22,0.03,2.94,1.04,0,">1 nonsynonymous","T85S Y123L",2
"lib2","SARS-CoV-2","ACTTTAAGTAACAGTA",12,169.86,10.36,-0.47,0.04,2.94,1.03,0,">1 nonsynonymous","T3A T46D",2
"lib2","SARS-CoV-2","ACTTTAATACCAAGAA",4,20.56,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","C31K N130H F167T",3
"lib2","SARS-CoV-2","ACTTTAATCTACACTG",10,93.43,9.46,-1.38,0.11,1.86,1.06,0,">1 nonsynonymous","A14V D90G",2
"lib2","SARS-CoV-2","ACTTTACATCATACAC",2,5.2,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","L95R W106D",2
"lib2","SARS-CoV-2","ACTTTACCAAAATCAG",4,53.22,10.79,-0.05,0.06,2.97,1.06,0,">1 nonsynonymous","R16M S200P",2
"lib2","SARS-CoV-2","ACTTTACCATATCCCA",3,13.04,7.06,-3.78,0.29,1.5,1.01,0.01,">1 nonsynonymous","L5A V37K S43G A105R",4
"lib2","SARS-CoV-2","ACTTTACGAACTCACA",2,17.04,10.54,-0.3,0.1,3,1,0,">1 nonsynonymous","Q84R K114N",2
"lib2","SARS-CoV-2","ACTTTACGAATGTAAT",3,22.97,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","ACTTTACGGCGCTATT",1,10.49,10.74,-0.1,0.03,3,1,0,">1 nonsynonymous","Y123L Q163S",2
"lib2","SARS-CoV-2","ACTTTACTAAACCTAA",2,70.83,10.74,-0.1,0.05,2.95,1.08,0,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","ACTTTACTAATTGCCT",14,219.08,10.41,-0.43,0.04,2.9,1.07,0,">1 nonsynonymous","N58W T201L",2
"lib2","SARS-CoV-2","ACTTTACTGATACCTG",2,47.44,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y35K F62G D112R",3
"lib2","SARS-CoV-2","ACTTTACTGGGACCTA",2,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W I104S Y119G P161I",4
"lib2","SARS-CoV-2","ACTTTAGAAAGTTGGA",13,104.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27L L38F G51R P96I N118V F134S",6
"lib2","SARS-CoV-2","ACTTTAGAAGCAGTAT",1,16.11,10.32,-0.52,0.12,2.61,1.04,0.01,">1 nonsynonymous","G83V T201W",2
"lib2","SARS-CoV-2","ACTTTAGACAAAAATT",1,16.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T46M L95S P197E",3
"lib2","SARS-CoV-2","ACTTTAGCACCGGTGT",4,1.26,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib2","SARS-CoV-2","ACTTTAGGATTTGCGG",11,184.32,10.93,0.09,0.06,2.86,1.14,0,">1 nonsynonymous","V37G N130K",2
"lib2","SARS-CoV-2","ACTTTAGGTGTACCCC",1,33.74,10.22,-0.62,0.06,2.96,1.05,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","ACTTTATGAGGCAAAC",10,63.1,9.19,-1.65,0.2,1.5,1.05,0.02,">1 nonsynonymous","I2A T15F N107R K128P",4
"lib2","SARS-CoV-2","ACTTTATGTAACACCT",3,13.06,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","E10N S69G A89F L162V",4
"lib2","SARS-CoV-2","ACTTTCAAATCAGGTC",6,115.47,10.81,-0.02,0.07,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTCAAATGTTCAT",5,122.38,10.26,-0.58,0.03,2.94,1.04,0,">1 nonsynonymous","G166S K199V",2
"lib2","SARS-CoV-2","ACTTTCAATGACTCAC",2,47.37,10.86,0.02,0.05,2.88,1.14,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","ACTTTCAGTAGAATTG",2,48.34,9.68,-1.16,0.1,2.18,1.04,0,">1 nonsynonymous","L60R N107S K132N",3
"lib2","SARS-CoV-2","ACTTTCATAAAGCAGA",2,73.26,10.51,-0.33,0.06,2.87,1.09,0,">1 nonsynonymous","L60S T148I",2
"lib2","SARS-CoV-2","ACTTTCCAATACCGTT",4,74.13,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G86S G152S C158E Q176P",4
"lib2","SARS-CoV-2","ACTTTCCACAACCCCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36G",1
"lib2","SARS-CoV-2","ACTTTCCAGTATTGTA",2,0.78,NA,NA,NA,NA,NA,NA,"stop","G51P S113*",2
"lib2","SARS-CoV-2","ACTTTCCCCTTGATCT",7,77.08,8.47,-2.36,0.11,2.57,1.08,0,">1 nonsynonymous","Y119S S139I",2
"lib2","SARS-CoV-2","ACTTTCCCGGCGTCCA",5,71.83,10.65,-0.18,0.04,2.92,1.11,0,">1 nonsynonymous","N40K C61M",2
"lib2","SARS-CoV-2","ACTTTCCTGCTTTAAC",1,8.23,8.2,-2.63,0.28,1.71,1.23,0.02,">1 nonsynonymous","N64A R73V K128Y",3
"lib2","SARS-CoV-2","ACTTTCCTTAAATGTA",9,81.36,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N4W D68M E141V C195L",4
"lib2","SARS-CoV-2","ACTTTCGAAAAAAATA",1,20.54,8.94,-1.9,0.32,1.5,1.04,0.06,">1 nonsynonymous","V77M C102L",2
"lib2","SARS-CoV-2","ACTTTCGAAAACGCAA",1,4.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","ACTTTCGATCCATTAC",11,90.25,10.8,-0.03,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTCGCCGACTTTT",3,45.51,10.96,0.12,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTCGCTGTACCAA",9,106.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35V C61Y F134R C150R",4
"lib2","SARS-CoV-2","ACTTTCGGTCATTCGT",3,52.99,10.88,0.04,0.07,2.97,1.06,0,"1 nonsynonymous","A190H",1
"lib2","SARS-CoV-2","ACTTTCTAATTGTGCC",7,108.24,10.64,-0.2,0.05,2.83,1.18,0,">1 nonsynonymous","K114S Q163S",2
"lib2","SARS-CoV-2","ACTTTCTACACAGCAC",2,20.96,9.75,-1.08,0.12,2.57,1.12,0.01,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","ACTTTCTAGTTAGACA",15,120.94,10.81,-0.03,0.04,2.94,1.08,0,">1 nonsynonymous","S36L K56E",2
"lib2","SARS-CoV-2","ACTTTCTATACATCAC",10,233.87,10.24,-0.59,0.05,2.8,1.09,0,">1 nonsynonymous","S45P E141S",2
"lib2","SARS-CoV-2","ACTTTCTCAAAAGCGA",8,25.7,8.34,-2.5,0.28,1.5,1.1,0.03,">1 nonsynonymous","S41V P96T S113W N151L",4
"lib2","SARS-CoV-2","ACTTTCTCGAAAGTGG",1,42.05,10.41,-0.42,0.09,2.78,1.11,0,">1 nonsynonymous","T3D Y35T",2
"lib2","SARS-CoV-2","ACTTTCTGTAATCGGG",6,15.13,7.48,-3.35,0.29,1.5,1.02,0.04,">1 nonsynonymous","K87F W106L D112E",3
"lib2","SARS-CoV-2","ACTTTCTTAATTCAAA",28,331.61,10.65,-0.19,0.04,2.91,1.09,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","ACTTTCTTCTTATCAC",1,43.33,9.8,-1.04,0.03,2.97,1.04,0,">1 nonsynonymous","V37L Q168E",2
"lib2","SARS-CoV-2","ACTTTGAATCGATTTG",8,139.28,9.13,-1.71,0.07,2.78,1.14,0,">1 nonsynonymous","N151S G166H",2
"lib2","SARS-CoV-2","ACTTTGAATTCTTGAA",3,146.16,10.83,-0.01,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTGAATTTTTCAG",12,172.19,6.63,-4.21,0.36,1.5,1.18,0.02,">1 nonsynonymous","I28P C61F",2
"lib2","SARS-CoV-2","ACTTTGAGAATACCCC",9,1.62,NA,NA,NA,NA,NA,NA,"stop","W106* E186G T201A",3
"lib2","SARS-CoV-2","ACTTTGAGAATGTACA",2,7.02,9.48,-1.36,0.17,1.78,1.04,0.01,">1 nonsynonymous","Y35I S41C L131F Q163G",4
"lib2","SARS-CoV-2","ACTTTGAGGAATAACA",1,30.21,8.75,-2.08,0.08,2.7,1.07,0,">1 nonsynonymous","D98C N109Y K198R",3
"lib2","SARS-CoV-2","ACTTTGATAATGTTGA",11,126.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10T V32S D97S V153Q C158G",5
"lib2","SARS-CoV-2","ACTTTGATGATTGACA",7,126.86,10.09,-0.74,0.03,3,1.02,0,">1 nonsynonymous","A14N F156M",2
"lib2","SARS-CoV-2","ACTTTGATTAATTTTT",4,27.14,10.37,-0.47,0.05,2.9,1.11,0,">1 nonsynonymous","N40M S43C",2
"lib2","SARS-CoV-2","ACTTTGCAAGGCCTAA",3,15.58,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N30F S41H P82D D98G L122Q",5
"lib2","SARS-CoV-2","ACTTTGCACTGATATT",4,67.71,8.25,-2.58,0.09,2.93,1.06,0,">1 nonsynonymous","V32E K87T Y159V T201M",4
"lib2","SARS-CoV-2","ACTTTGCATAACACCT",3,16.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2V C6V T55Y A105D N120M E141L Y178V",7
"lib2","SARS-CoV-2","ACTTTGCATACGTAAA",3,25.51,6,-4.84,1.93,1.5,1.21,0.02,">1 nonsynonymous","D90F D97F G146T",3
"lib2","SARS-CoV-2","ACTTTGCCCCAGTATA",2,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S29A W106F G152L",4
"lib2","SARS-CoV-2","ACTTTGCTAAAAACTG",9,3.54,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib2","SARS-CoV-2","ACTTTGGAACTGCCCC",7,82.4,9.92,-0.92,0.1,2.32,1.04,0,">1 nonsynonymous","K56R I88M",2
"lib2","SARS-CoV-2","ACTTTGGATACTTTGC",15,83.61,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","N13S T63D Y91L S147A N157L",5
"lib2","SARS-CoV-2","ACTTTGGGAACTACAG",1,2.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141A",1
"lib2","SARS-CoV-2","ACTTTGGGGCCCCTCC",1,25.52,10.44,-0.39,0.05,2.94,1.06,0,">1 nonsynonymous","L60S F160V",2
"lib2","SARS-CoV-2","ACTTTGTACACCGCCA",8,77.43,9.61,-1.22,0.06,2.71,1.04,0,">1 nonsynonymous","V37Q F44V Y121I",3
"lib2","SARS-CoV-2","ACTTTGTCACTTTCGG",13,245.93,10.8,-0.03,0.04,2.92,1.08,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","ACTTTTAAAAAAGAAT",8,0.69,NA,NA,NA,NA,NA,NA,"stop","N4E V65R T201*",3
"lib2","SARS-CoV-2","ACTTTTAACAAAACCA",15,4.15,NA,NA,NA,NA,NA,NA,"stop","S113H N120P C195* G196T T201L",5
"lib2","SARS-CoV-2","ACTTTTAAGACCCACA",4,38.77,9.66,-1.18,0.1,2.34,1.1,0,">1 nonsynonymous","K128V Q144L",2
"lib2","SARS-CoV-2","ACTTTTAATATATCAT",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96D V103A Y121L",3
"lib2","SARS-CoV-2","ACTTTTAATTACTAGA",3,25.51,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","L38R I104L I142R",3
"lib2","SARS-CoV-2","ACTTTTACCCAGAATC",6,44.78,10.25,-0.58,0.05,2.95,1.01,0,">1 nonsynonymous","Y35P K128R",2
"lib2","SARS-CoV-2","ACTTTTAGCTACAATA",4,20.76,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N30K A89W E141C",3
"lib2","SARS-CoV-2","ACTTTTAGTCGTGACC",7,97.13,10.48,-0.35,0.04,2.9,1.02,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","ACTTTTATAATCTCTG",3,0,NA,NA,NA,NA,NA,NA,"stop","C31* K56A N107A S147Y F160P",5
"lib2","SARS-CoV-2","ACTTTTATACGACGTA",1,39.66,10.8,-0.04,0.05,2.98,1.04,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","ACTTTTATCTCCTGCG",3,45.02,6.97,-3.87,0.38,1.5,1.18,0.03,"1 nonsynonymous","V65D",1
"lib2","SARS-CoV-2","ACTTTTATCTCGGCCT",1,19.85,10.86,0.02,0.06,2.91,1.11,0,">1 nonsynonymous","Y39V P149T",2
"lib2","SARS-CoV-2","ACTTTTATGCGTTCCT",7,25.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9N C61N Y93P A105Y C150A",5
"lib2","SARS-CoV-2","ACTTTTCAGTATAAAG",4,22.48,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N1R R124L I138V V180L",4
"lib2","SARS-CoV-2","ACTTTTCATTATCACC",2,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M D90S S113V G155M",4
"lib2","SARS-CoV-2","ACTTTTCGGACCGTTG",1,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L N92S P161Q",3
"lib2","SARS-CoV-2","ACTTTTCGGATATCTA",4,134.13,10.87,0.03,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ACTTTTCGTAATTCAC",1,15.72,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L5I N40R D75W V181L",4
"lib2","SARS-CoV-2","ACTTTTCGTATTTCCA",7,75.42,7.22,-3.62,0.29,1.5,1.16,0.02,">1 nonsynonymous","N13L L60S Y66N V103C",4
"lib2","SARS-CoV-2","ACTTTTCGTCCATAAC",1,90.89,10.72,-0.11,0.1,2.81,1.04,0,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","ACTTTTGAATAACGTA",6,346.07,10.24,-0.59,0.03,2.75,1.03,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","ACTTTTGAGTGAATCT",6,67.37,8.22,-2.62,0.23,1.5,1.05,0.02,">1 nonsynonymous","K94R L131S",2
"lib2","SARS-CoV-2","ACTTTTGTCACTTTAC",3,1.64,NA,NA,NA,NA,NA,NA,"stop","I2P S43* L95S G101Y N107L Y178I",6
"lib2","SARS-CoV-2","ACTTTTTAAATCTTTT",3,19.04,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D68L Y119A T201L",3
"lib2","SARS-CoV-2","ACTTTTTAACACAACG",11,13.83,NA,NA,NA,NA,NA,NA,"stop","A81H T85R R124*",3
"lib2","SARS-CoV-2","ACTTTTTACTACTAAC",7,47.16,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y35I F99S L122F Y175W",4
"lib2","SARS-CoV-2","ACTTTTTATTCAAAAA",1,67.62,10.49,-0.35,0.04,2.9,1.06,0,">1 nonsynonymous","F12V R16T",2
"lib2","SARS-CoV-2","ACTTTTTGACACTGTG",2,30.8,6,-4.84,2,2.7,1.16,0.01,">1 nonsynonymous","G86S L131F",2
"lib2","SARS-CoV-2","ACTTTTTGCCTGGAAG",1,18.49,8.83,-2.01,0.18,2.11,1.07,0.01,">1 nonsynonymous","Y119F K128R F167Y",3
"lib2","SARS-CoV-2","ACTTTTTTAACACGCT",2,7.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3M N4K V103L",3
"lib2","SARS-CoV-2","ACTTTTTTGTATGTTA",5,122.14,10.79,-0.05,0.03,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAAAAAAACTTGGC",4,49.75,10.66,-0.18,0.06,2.97,1,0,">1 nonsynonymous","I2V G9P",2
"lib2","SARS-CoV-2","AGAAAAAAAGCTTTAT",7,79.12,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23G A105K K132S",3
"lib2","SARS-CoV-2","AGAAAAAACAATCGCG",1,9.54,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5S V103Q K128A",3
"lib2","SARS-CoV-2","AGAAAAAACATAACCG",5,47.53,6.49,-4.35,0.53,1.5,1.13,0.03,">1 nonsynonymous","S41T Y91A Y121D R136G",4
"lib2","SARS-CoV-2","AGAAAAAACCCAACTG",1,75.84,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D34G G116H S147F Y175Q",4
"lib2","SARS-CoV-2","AGAAAAAACTCACAGC",4,16.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4T K87A G101A",3
"lib2","SARS-CoV-2","AGAAAAAATAAAATTT",3,58.21,9.94,-0.89,0.09,2.38,1.04,0,">1 nonsynonymous","L57H S129V E141Q",3
"lib2","SARS-CoV-2","AGAAAAAATAACAATA",6,109.82,10.62,-0.22,0.03,2.91,1.07,0,">1 nonsynonymous","A81Q P149N",2
"lib2","SARS-CoV-2","AGAAAAAATCAATTCC",9,73.87,6.01,-4.82,1.09,1.5,1.14,0.02,">1 nonsynonymous","S19L D90R Y119H A145E",4
"lib2","SARS-CoV-2","AGAAAAAATCCGTATA",2,43.92,10.3,-0.54,0.04,2.9,1.03,0,">1 nonsynonymous","T3S P7V N58R",3
"lib2","SARS-CoV-2","AGAAAAAATTACCCCA",5,81.78,10.84,0.01,0.07,2.94,1.06,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","AGAAAAACAAGCAGAA",11,1.08,NA,NA,NA,NA,NA,NA,"stop","A67V D68* N92T D137S",4
"lib2","SARS-CoV-2","AGAAAAACATATGTTC",3,16.35,10.58,-0.25,0.06,2.98,1.01,0,">1 nonsynonymous","G9F P149L",2
"lib2","SARS-CoV-2","AGAAAAACATCACGGT",3,107.24,10.58,-0.26,0.04,2.93,1.07,0,">1 nonsynonymous","T3W E141N",2
"lib2","SARS-CoV-2","AGAAAAACCCAAAACA",23,149.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K48M A67S D97E L122V F160C F167Y",6
"lib2","SARS-CoV-2","AGAAAAACGAATCGGC",7,11.85,9.7,-1.14,0.07,2.91,1.06,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","AGAAAAACGATCTCAA",2,9.76,10.3,-0.54,0.53,1.61,1,0.04,">1 nonsynonymous","L60P A81H",2
"lib2","SARS-CoV-2","AGAAAAACTCCTAACA",7,161.9,10.01,-0.83,0.06,2.6,1.08,0,">1 nonsynonymous","A18L K198L",2
"lib2","SARS-CoV-2","AGAAAAAGAGCGCATT",8,0.77,NA,NA,NA,NA,NA,NA,"stop","Y93* T100C",2
"lib2","SARS-CoV-2","AGAAAAAGCAACCACC",5,0.1,NA,NA,NA,NA,NA,NA,"stop","I28* V182W",2
"lib2","SARS-CoV-2","AGAAAAAGTAGGATTC",13,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P Y39V L60P R73A T170V F185L",6
"lib2","SARS-CoV-2","AGAAAAAGTCCCTCCC",10,272.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10S I72L C102R R127G P169C K199H",6
"lib2","SARS-CoV-2","AGAAAAATAATCCTGT",6,19.03,9.07,-1.77,0.25,1.82,1.15,0.02,">1 nonsynonymous","Y91R Y121H T148N",3
"lib2","SARS-CoV-2","AGAAAAATAATTTGTT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","R136* V173R K198N",3
"lib2","SARS-CoV-2","AGAAAAATATCTACCG",7,2.18,NA,NA,NA,NA,NA,NA,"stop","P96* A105Q G117D",3
"lib2","SARS-CoV-2","AGAAAAATATGAAACG",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I G51S D112K",3
"lib2","SARS-CoV-2","AGAAAAATCAAGTGGT",5,50.8,9.66,-1.18,0.06,1.88,1.07,0,">1 nonsynonymous","F44V D90V",2
"lib2","SARS-CoV-2","AGAAAAATGAACTATA",3,18.13,10.64,-0.2,0.05,3,1.01,0,">1 nonsynonymous","G9L K198Q",2
"lib2","SARS-CoV-2","AGAAAAATGCTTCACA",2,62.95,9.91,-0.93,0.08,2.65,1.06,0,">1 nonsynonymous","S41K T140Y G155A",3
"lib2","SARS-CoV-2","AGAAAAATGTCCCCAG",5,73.71,10.79,-0.05,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAAATTGTGAAGT",5,47.99,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N92M N157K T170G",3
"lib2","SARS-CoV-2","AGAAAAATTTTTTTCG",3,24.55,10.63,-0.21,0.04,2.98,1.05,0,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","AGAAAACAAAAGAACA",15,1.98,NA,NA,NA,NA,NA,NA,"stop","I72V I142* K198*",3
"lib2","SARS-CoV-2","AGAAAACACGTGAGAA",3,27.79,10.89,0.06,0.09,2.89,1.09,0,">1 nonsynonymous","P54Q T201M",2
"lib2","SARS-CoV-2","AGAAAACACTAATACG",4,59.65,10.76,-0.08,0.04,2.96,1.03,0,">1 nonsynonymous","F62W G116W",2
"lib2","SARS-CoV-2","AGAAAACACTTTCTAC",10,60.29,8.9,-1.94,0.1,1.89,1.04,0,">1 nonsynonymous","F44V L60A N107G T201A",4
"lib2","SARS-CoV-2","AGAAAACAGACCAGTA",9,54.57,10.64,-0.2,0.08,2.67,1.15,0,">1 nonsynonymous","E141H Q163L",2
"lib2","SARS-CoV-2","AGAAAACATGCTTCCC",1,49.81,10.44,-0.4,0.06,2.8,1.13,0,">1 nonsynonymous","G9K N40S N64K",3
"lib2","SARS-CoV-2","AGAAAACCAATACCTG",2,47,10.44,-0.39,0.06,2.83,1.11,0,">1 nonsynonymous","T3R S129L",2
"lib2","SARS-CoV-2","AGAAAACCACTATATA",9,70.83,10.26,-0.58,0.04,2.75,1.04,0,">1 nonsynonymous","Y39H D90H",2
"lib2","SARS-CoV-2","AGAAAACCAGCGTCAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Q T201L",2
"lib2","SARS-CoV-2","AGAAAACCGCCCGTAA",1,23.98,10.66,-0.18,0.08,2.87,1.13,0,">1 nonsynonymous","I104M E141N",2
"lib2","SARS-CoV-2","AGAAAACCGCGGGGCA",3,0.68,NA,NA,NA,NA,NA,NA,"stop","I28* L60Y N118A",3
"lib2","SARS-CoV-2","AGAAAACGAAATTAAA",8,101.45,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37S K48P I104M S139C",4
"lib2","SARS-CoV-2","AGAAAACGAATAGGTT",5,22.92,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","A14F N40Y C49L",3
"lib2","SARS-CoV-2","AGAAAACGACCAAATC",8,88.09,9.78,-1.05,0.09,2.4,1.06,0,">1 nonsynonymous","V37T A42D Y91S K128D",4
"lib2","SARS-CoV-2","AGAAAACGATCAAGCA",2,24.7,6,-4.84,1.13,1.5,1.1,0,">1 nonsynonymous","A89R C150K",2
"lib2","SARS-CoV-2","AGAAAACGTAACCAGA",4,20.97,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42E S53L E76W W106T Y165L",5
"lib2","SARS-CoV-2","AGAAAACTCCCAATTA",3,29.48,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V37N F99P F134K Q168A",4
"lib2","SARS-CoV-2","AGAAAACTGTAGGGTC",6,43.62,6,-4.84,2,1.5,1.25,0.08,">1 nonsynonymous","S45M D59G V103T Y178I",4
"lib2","SARS-CoV-2","AGAAAACTTGGACCGC",1,1.26,NA,NA,NA,NA,NA,NA,"stop","T100H I104* G152D N157M",4
"lib2","SARS-CoV-2","AGAAAAGAAAGCGTAA",11,168.95,6,-4.84,1,1.5,1.16,0,">1 nonsynonymous","F12N S41G F156C",3
"lib2","SARS-CoV-2","AGAAAAGAAATGGAAG",3,35.74,9.9,-0.94,0.1,2.13,1.12,0,">1 nonsynonymous","T15V L38M K48L",3
"lib2","SARS-CoV-2","AGAAAAGAATAGGCAA",1,8.41,10.83,-0.01,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAAGACATGTAAT",17,739.05,8.11,-2.73,0.07,1.65,1.07,0,"1 nonsynonymous","Q176Y",1
"lib2","SARS-CoV-2","AGAAAAGCACACTACA",4,131.16,10.22,-0.62,0.03,2.94,1.05,0,">1 nonsynonymous","K87S D97R S147R",3
"lib2","SARS-CoV-2","AGAAAAGCGATTCTGG",5,5.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y R127C T140Y",3
"lib2","SARS-CoV-2","AGAAAAGGAAATTAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","G9A S19* G51D K56S D97Q",5
"lib2","SARS-CoV-2","AGAAAAGGCCCTATTA",7,0.53,NA,NA,NA,NA,NA,NA,"stop","V37A V115T Y121M L131S P197S T201*",6
"lib2","SARS-CoV-2","AGAAAAGGCCTCAGAC",2,23.97,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","P96H Y159G",2
"lib2","SARS-CoV-2","AGAAAAGTAAACGAAA",1,7.52,11.04,0.2,0.1,2.8,1.18,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","AGAAAAGTAAAGAGAA",5,35.42,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","P7G R27V S113L N120H F160I",5
"lib2","SARS-CoV-2","AGAAAAGTATCACCAA",7,7.54,NA,NA,NA,NA,NA,NA,"stop","F44* G86K N92F N151L",4
"lib2","SARS-CoV-2","AGAAAAGTATGTAAAA",4,29.52,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","Y93I G117D",2
"lib2","SARS-CoV-2","AGAAAAGTGTGGCACC",2,42.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9S F99C G116R",3
"lib2","SARS-CoV-2","AGAAAATAATCAAAAT",2,81.13,10.78,-0.05,0.06,2.98,1.03,0,">1 nonsynonymous","S41V S147N",2
"lib2","SARS-CoV-2","AGAAAATACATGGTAG",3,57.11,6.05,-4.79,0.89,1.5,1.19,0.01,">1 nonsynonymous","G83V A89N Y178R",3
"lib2","SARS-CoV-2","AGAAAATATATCTATT",4,6.38,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F47I L60M V103Y S139V Y175H",5
"lib2","SARS-CoV-2","AGAAAATATCCTAGTT",3,24.3,9.83,-1,0.09,2.61,1.13,0,">1 nonsynonymous","I28L G83N I88L",3
"lib2","SARS-CoV-2","AGAAAATCTTTAGAAG",20,174.48,9.49,-1.35,0.1,1.71,1.05,0,">1 nonsynonymous","N1R V11W Y123I N130T",4
"lib2","SARS-CoV-2","AGAAAATGAATATATT",1,5.96,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T55F G117P Y123T N151I",4
"lib2","SARS-CoV-2","AGAAAATGAGCAGAGT",2,30.54,10.04,-0.8,0.09,2.03,1.01,0,">1 nonsynonymous","V103M Q163V",2
"lib2","SARS-CoV-2","AGAAAATGCTTAAAAT",10,150.1,9.76,-1.07,0.06,2.21,1.06,0,">1 nonsynonymous","N40W F62E",2
"lib2","SARS-CoV-2","AGAAAATGGCAAGAAC",8,45.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8K A81L W106S",3
"lib2","SARS-CoV-2","AGAAAATGTCTGGATA",1,15.96,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","A14I R25E Y50L T55C T85M A89F P177K T201V",8
"lib2","SARS-CoV-2","AGAAAATTAATATAGT",1,63.73,10.81,-0.02,0.04,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAATTAATGAAGT",2,81.98,10.35,-0.49,0.06,2.81,1.04,0,">1 nonsynonymous","R27L N40T K128A P149L",4
"lib2","SARS-CoV-2","AGAAAATTAGTTAAAA",4,18.02,7.08,-3.76,0.61,1.5,1.02,0.08,">1 nonsynonymous","S69T G101L R179G",3
"lib2","SARS-CoV-2","AGAAAATTATGGATAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","F12* W106L Y119L",3
"lib2","SARS-CoV-2","AGAAAATTATGTCCCA",4,26.28,9.68,-1.16,0.09,2.57,1.01,0,">1 nonsynonymous","A81S T148N G155H",3
"lib2","SARS-CoV-2","AGAAAATTATTTACGA",2,10.07,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","T46N F70V K128L F134N Y159I",5
"lib2","SARS-CoV-2","AGAAAATTCAGACATA",5,329.37,8.86,-1.97,0.06,2.47,1.1,0,">1 nonsynonymous","A33C Q176L",2
"lib2","SARS-CoV-2","AGAAAATTCAGACATT",2,14.74,6.56,-4.27,0.5,1.5,1.06,0.02,">1 nonsynonymous","D90K L162E",2
"lib2","SARS-CoV-2","AGAAAATTTAAGATTT",1,34.73,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","I104L S113I Y143L P149C",4
"lib2","SARS-CoV-2","AGAAACAAAAACTGCT",9,39.04,9.38,-1.45,0.17,1.71,1.1,0.02,">1 nonsynonymous","N1D A105Q",2
"lib2","SARS-CoV-2","AGAAACAAAATTGATA",6,6.98,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N13H F70S P149Y",3
"lib2","SARS-CoV-2","AGAAACAAACCCAGAG",16,123.54,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","F160M V181D",2
"lib2","SARS-CoV-2","AGAAACAAACTCATAT",8,66.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8S P54H N92S G155A",4
"lib2","SARS-CoV-2","AGAAACAACAAAGGAT",10,87.43,10.81,-0.03,0.07,2.96,1.04,0,">1 nonsynonymous","N58Q P149D",2
"lib2","SARS-CoV-2","AGAAACAACCAACACC",4,89.76,6.46,-4.38,0.31,1.5,1.15,0.01,"1 nonsynonymous","Y159G",1
"lib2","SARS-CoV-2","AGAAACAACCAATCCG",15,3.16,NA,NA,NA,NA,NA,NA,"stop","T170R L183*",2
"lib2","SARS-CoV-2","AGAAACAACGCTGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P S41Q A89S I104C N120K F126H",6
"lib2","SARS-CoV-2","AGAAACAAGCGAAAAA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","AGAAACAAGTCAGTGG",2,5.01,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T15R N107T F134D E141R",4
"lib2","SARS-CoV-2","AGAAACAAGTTATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","K48T Q163N T201*",3
"lib2","SARS-CoV-2","AGAAACAATAAACACT",4,61.4,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y39K L60T P82M Y93V A105L",5
"lib2","SARS-CoV-2","AGAAACAATTTAGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37D S69L Y91R F99L Y143* R179L",6
"lib2","SARS-CoV-2","AGAAACACAACGGGTG",3,22.75,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S43Y L95S D97V Y121N S164Y",5
"lib2","SARS-CoV-2","AGAAACACAACTGACA",12,146.53,6.2,-4.64,0.6,1.5,1.19,0.01,">1 nonsynonymous","I2S F12G N118F",3
"lib2","SARS-CoV-2","AGAAACACACATCCAT",13,7.7,NA,NA,NA,NA,NA,NA,"stop","S36* F62I E141T E154F",4
"lib2","SARS-CoV-2","AGAAACACGCATAACT",9,95.06,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L162A Y175L",2
"lib2","SARS-CoV-2","AGAAACACTACCTGCA",6,100.34,7.95,-2.89,0.1,2.38,1.13,0,">1 nonsynonymous","V37L C158S",2
"lib2","SARS-CoV-2","AGAAACACTCTAGGCA",4,76.39,10.58,-0.26,0.04,2.87,1.14,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","AGAAACAGAAAGGAAT",1,81.83,10.86,0.02,0.04,2.96,1.06,0,">1 nonsynonymous","A42M N64V",2
"lib2","SARS-CoV-2","AGAAACAGAACGGCCG",6,90.67,9.34,-1.5,0.04,2.92,1.08,0,">1 nonsynonymous","Y39V D75F G166R T201L",4
"lib2","SARS-CoV-2","AGAAACAGGATTACTT",10,122.49,9.93,-0.9,0.07,2.13,1.02,0,">1 nonsynonymous","A105F K132A",2
"lib2","SARS-CoV-2","AGAAACAGTAATCTTA",11,143.9,10.2,-0.63,0.05,2.81,1.01,0,">1 nonsynonymous","D59E F99L",2
"lib2","SARS-CoV-2","AGAAACATAAAAAACC",3,34.07,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L5F K26Q S36L I72F",4
"lib2","SARS-CoV-2","AGAAACATAAAAGCTA",20,278.72,10.24,-0.59,0.03,2.95,1.07,0,"1 nonsynonymous","E154H",1
"lib2","SARS-CoV-2","AGAAACCAAAATATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E R124G I142S Q168H Q176P",5
"lib2","SARS-CoV-2","AGAAACCAACTCATTA",8,158.2,10.36,-0.48,0.04,2.88,1.07,0,"1 nonsynonymous","Y178Q",1
"lib2","SARS-CoV-2","AGAAACCACGAACGAT",9,148.5,10.7,-0.13,0.03,2.94,1.07,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","AGAAACCAGTACAGTG",3,9.48,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F99S F134Y",2
"lib2","SARS-CoV-2","AGAAACCATCATATGC",1,15.76,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S69Q F99S L131I S200I",4
"lib2","SARS-CoV-2","AGAAACCCAGACTGTT",8,75.94,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","R27M A89V P133F Y175T",4
"lib2","SARS-CoV-2","AGAAACCCCCCCACTA",8,273.73,9.57,-1.26,0.02,2.93,1.08,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","AGAAACCCGACTTAAG",7,15.84,10.15,-0.69,0.2,2.25,1.08,0.03,">1 nonsynonymous","D34M T100S",2
"lib2","SARS-CoV-2","AGAAACCGAACCACCT",3,64.82,8.79,-2.05,0.09,2.64,1.02,0,">1 nonsynonymous","D98L G116M S147P G166M",4
"lib2","SARS-CoV-2","AGAAACCTCGCTTGAG",20,340.68,10.2,-0.63,0.04,2.75,1.03,0,">1 nonsynonymous","D98S Q144A S184M",3
"lib2","SARS-CoV-2","AGAAACCTGACAATGC",1,5.66,6.09,-4.75,0.75,3,1,0.01,">1 nonsynonymous","S19W V103Q G116A F126A L162T T170F",6
"lib2","SARS-CoV-2","AGAAACCTGATTCACG",2,17.82,10.1,-0.74,0.08,3,1.03,0.01,"1 nonsynonymous","A145C",1
"lib2","SARS-CoV-2","AGAAACCTTAGTTCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A F62Q V103K F126M",4
"lib2","SARS-CoV-2","AGAAACCTTATGTAAG",10,12.87,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2Y P54T Q84R I104G Y121M I138G",6
"lib2","SARS-CoV-2","AGAAACCTTCCACTTT",4,144.64,10.66,-0.17,0.04,2.88,1.05,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","AGAAACGAAACCTCTA",8,92.79,10.92,0.08,0.05,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAACGCATTTTAGG",19,11.62,9.34,-1.49,0.36,2.05,1.04,0.05,">1 nonsynonymous","A14S S19P K26N D59N D90H I138T",6
"lib2","SARS-CoV-2","AGAAACGGCATCAATT",4,114.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V77W E135A A145V K199N",4
"lib2","SARS-CoV-2","AGAAACGTACACATAC",2,15.81,9.1,-1.74,0.06,3,1.03,0,">1 nonsynonymous","R27K N109Y T170A",3
"lib2","SARS-CoV-2","AGAAACGTACACCGTA",3,0.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGAAACGTCCCCCCAA",3,11.81,10.07,-0.77,0.12,2.74,1.11,0.01,">1 nonsynonymous","T3S A14T L38F",3
"lib2","SARS-CoV-2","AGAAACTAAACGAACA",8,5.3,NA,NA,NA,NA,NA,NA,"stop","V37L G86S T100R N120* D137W",5
"lib2","SARS-CoV-2","AGAAACTAACTTGGGA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","C6W R124S F126* G172I",4
"lib2","SARS-CoV-2","AGAAACTAAGCCGAAA",8,102.37,6.92,-3.92,0.23,1.5,1.18,0.01,">1 nonsynonymous","L57T N171D",2
"lib2","SARS-CoV-2","AGAAACTAATGATGCC",2,1.87,NA,NA,NA,NA,NA,NA,"stop","G9K T15C D34C A42Y T55A G83M S113* Y123* T201C",9
"lib2","SARS-CoV-2","AGAAACTAATTAGATT",6,58.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6F T46A A81I T100I",4
"lib2","SARS-CoV-2","AGAAACTATATTCTGG",2,23.39,9.02,-1.81,0.26,1.52,1.01,0.03,"1 nonsynonymous","W23E",1
"lib2","SARS-CoV-2","AGAAACTATCGTACAT",4,145.67,9.68,-1.15,0.06,2.42,1,0,">1 nonsynonymous","I2D F47I T63L P149I V153I",5
"lib2","SARS-CoV-2","AGAAACTCTTCGTAAT",2,54.9,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T3S N107M G166L G174E",4
"lib2","SARS-CoV-2","AGAAACTGCCTATATT",3,14.7,6,-4.84,1.43,1.5,1.09,0.02,">1 nonsynonymous","N1W F99P Y175M",3
"lib2","SARS-CoV-2","AGAAACTGGCGTGAAG",9,212.45,9.65,-1.18,0.04,2.8,1.14,0,"1 nonsynonymous","G146Q",1
"lib2","SARS-CoV-2","AGAAACTGTCTGCAAA",4,22.81,10.75,-0.08,0.05,2.95,1.07,0,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","AGAAACTTAATGAGCA",6,7.06,NA,NA,NA,NA,NA,NA,"stop","R25* Y35E Y123C E154L S200L",5
"lib2","SARS-CoV-2","AGAAACTTACTGTGGA",8,92.59,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F8S V77E N157V",3
"lib2","SARS-CoV-2","AGAAACTTTAGACCGG",1,27.32,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2L P161F",2
"lib2","SARS-CoV-2","AGAAACTTTTACGACT",1,6.48,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","S19L G146A V181P",3
"lib2","SARS-CoV-2","AGAAAGAAATAGAAAA",5,38.62,10.36,-0.48,0.05,2.87,1.15,0,">1 nonsynonymous","S41V N120H P149Q",3
"lib2","SARS-CoV-2","AGAAAGAACCCAATTT",8,152.6,10.8,-0.04,0.05,2.88,1.13,0,"1 nonsynonymous","T140L",1
"lib2","SARS-CoV-2","AGAAAGAATGATACAC",4,8.58,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F17Q S69C G86R G116V",4
"lib2","SARS-CoV-2","AGAAAGAATGCTAACA",7,2.78,NA,NA,NA,NA,NA,NA,"stop","T3R Y119L D137* Q144L",4
"lib2","SARS-CoV-2","AGAAAGAATTAAATCA",1,8.2,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAGACAATAGAAG",8,105.08,8.48,-2.36,0.12,2.13,1.14,0.01,">1 nonsynonymous","C6R P169Y",2
"lib2","SARS-CoV-2","AGAAAGACACAGCACC",3,102.31,10.66,-0.18,0.03,2.92,1.08,0,">1 nonsynonymous","P7K G83R",2
"lib2","SARS-CoV-2","AGAAAGAGAATGGTAG",5,119.62,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G86L I138P T201I",3
"lib2","SARS-CoV-2","AGAAAGAGATTTCGTA",11,98.4,10.92,0.08,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAAGATCTGTATAT",10,170.9,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A22C D90L Y178R",3
"lib2","SARS-CoV-2","AGAAAGATGACCGGAC",7,43.6,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","F8N N107T E154G",3
"lib2","SARS-CoV-2","AGAAAGATGCAGTCTT",2,32.73,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","G86V N151T",2
"lib2","SARS-CoV-2","AGAAAGATGCCGATTA",4,80.23,6.39,-4.44,0.55,1.5,1.15,0.02,">1 nonsynonymous","A105S S139F A145C",3
"lib2","SARS-CoV-2","AGAAAGATTAAACTCA",4,1.9,NA,NA,NA,NA,NA,NA,"stop","F62T G86V L162* Y178*",4
"lib2","SARS-CoV-2","AGAAAGATTAACGAAC",5,16.39,10.72,-0.11,0.06,3,1.01,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AGAAAGATTCAACGTT",10,247.93,10.78,-0.06,0.02,2.98,1.04,0,">1 nonsynonymous","K56Q T201H",2
"lib2","SARS-CoV-2","AGAAAGCACACTTATG",4,37.54,6,-4.84,1.5,1.5,1.18,0.01,">1 nonsynonymous","F44P A81C Q144W",3
"lib2","SARS-CoV-2","AGAAAGCAGCCCAACA",3,61.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19Q D98W A105R P177S",4
"lib2","SARS-CoV-2","AGAAAGCAGCCTGCTA",5,47.64,10.84,0,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAGCATGCGAAGC",12,178.5,10.79,-0.04,0.04,2.94,1.06,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","AGAAAGCATTGCTCGT",2,33.39,10.14,-0.69,0.09,2.78,1.16,0,">1 nonsynonymous","G9E A105M",2
"lib2","SARS-CoV-2","AGAAAGCCAACTGGTA",3,56.36,9.9,-0.94,0.11,2.38,1.05,0.01,">1 nonsynonymous","N64D P133N",2
"lib2","SARS-CoV-2","AGAAAGCCATCTAGTG",5,28.63,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","F62E N118K R136M P177V",4
"lib2","SARS-CoV-2","AGAAAGCCTACCAAAA",3,73.14,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N4T N40T L95A R136Y F156L",5
"lib2","SARS-CoV-2","AGAAAGCGAAAATGGA",2,28.28,8.29,-2.55,0.15,1.9,1.1,0.01,">1 nonsynonymous","G86T D97M",2
"lib2","SARS-CoV-2","AGAAAGCTGACAAAAT",9,43.33,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V37L F62A V77N L131E",4
"lib2","SARS-CoV-2","AGAAAGCTGATGCTCT",9,282.55,8.92,-1.92,0.07,2.53,1.08,0,">1 nonsynonymous","D98E N118I",2
"lib2","SARS-CoV-2","AGAAAGCTGTTACAGT",6,48.85,10.86,0.02,0.07,2.87,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAAGGAAAAGTCCT",3,6.25,7.62,-3.22,0.29,1.5,1,0,">1 nonsynonymous","A105T G117N F134K",3
"lib2","SARS-CoV-2","AGAAAGGAAACTATGT",4,50.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10M C49D Y91L P197L",4
"lib2","SARS-CoV-2","AGAAAGGAACTAAAAT",3,21.76,9.31,-1.52,0.11,2.57,1.1,0,">1 nonsynonymous","F8I Q84S N118C",3
"lib2","SARS-CoV-2","AGAAAGGACATTCTGA",1,18.86,9.85,-0.99,0.14,2.58,1.09,0.01,">1 nonsynonymous","Y35T A42D E141L",3
"lib2","SARS-CoV-2","AGAAAGGATCCCGACG",1,16.77,10.62,-0.21,0.06,2.77,1.25,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAAGGCAATTCCCT",6,85.67,10.85,0.01,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAAGGTACATCTCA",5,2.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175D",1
"lib2","SARS-CoV-2","AGAAAGGTCATTAACA",2,21.29,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C61E D90S F99Q P161S",4
"lib2","SARS-CoV-2","AGAAAGTAACGTATCC",2,29.26,6,-4.84,2,3,1.21,0,">1 nonsynonymous","E10A L162D",2
"lib2","SARS-CoV-2","AGAAAGTAACGTGGAC",10,1.46,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","AGAAAGTAGATAGCAA",1,25.94,6,-4.84,2,1.5,1.26,0.05,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","AGAAAGTAGGAATACG",4,46.18,10.79,-0.04,0.08,2.8,1.08,0,"1 nonsynonymous","C195S",1
"lib2","SARS-CoV-2","AGAAAGTATGTTATAA",4,36.59,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L60K R127I",2
"lib2","SARS-CoV-2","AGAAAGTATTCTTGTA",1,24,10.95,0.11,0.05,2.96,1.04,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","AGAAAGTCCACACTGT",4,32.56,10.65,-0.18,0.08,2.85,1.11,0,"1 nonsynonymous","A22Y",1
"lib2","SARS-CoV-2","AGAAAGTGAAAAGTCC",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S P169F P177L",3
"lib2","SARS-CoV-2","AGAAAGTGAACTACAT",1,7.29,9.43,-1.4,0.16,2.01,1,0.01,">1 nonsynonymous","K94Y T140L",2
"lib2","SARS-CoV-2","AGAAAGTGATAAGAAG",4,25.42,6.33,-4.5,0.61,1.5,1.09,0.01,">1 nonsynonymous","F17I N107F N171W L188V",4
"lib2","SARS-CoV-2","AGAAAGTGCCTAGACT",2,22.59,9.56,-1.28,0.13,1.79,1.07,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AGAAAGTGCTAGGAGC",14,194.77,10.32,-0.52,0.03,2.89,1.03,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","AGAAAGTGGACATATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M N107Q G152R",3
"lib2","SARS-CoV-2","AGAAAGTGGCGCTAAA",1,22.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41R G51Y C61S K87G D137F Q163S Q176R",7
"lib2","SARS-CoV-2","AGAAAGTGTAAGAGAT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N S41N D90L R124L",4
"lib2","SARS-CoV-2","AGAAAGTGTATCATCC",3,69.95,10.65,-0.19,0.05,2.9,1.09,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","AGAAAGTTTCGCGGAT",12,6.55,NA,NA,NA,NA,NA,NA,"stop","L57M L95* V115L T170A",4
"lib2","SARS-CoV-2","AGAAATAAACTTAGGA",1,18.42,8.5,-2.34,0.39,1.5,1,0.05,">1 nonsynonymous","F44P L60R A67Y F99I",4
"lib2","SARS-CoV-2","AGAAATAAATAGTCTC",8,210.66,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L162E Q176A",2
"lib2","SARS-CoV-2","AGAAATAAGAGTACGA",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S V52L P96V K114V N120F G172F",6
"lib2","SARS-CoV-2","AGAAATAATAAGTATT",8,92.57,10.18,-0.66,0.08,2.66,1.01,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","AGAAATACCATAAAAC",8,40.7,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R78Q G83W Y93T",3
"lib2","SARS-CoV-2","AGAAATACCATTTTTT",5,0.55,NA,NA,NA,NA,NA,NA,"stop","S41* K198P",2
"lib2","SARS-CoV-2","AGAAATACCCTAAACA",1,15.61,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","V11S K56M G117R G172V",4
"lib2","SARS-CoV-2","AGAAATACCCTCGACT",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31K Y50N G172L",3
"lib2","SARS-CoV-2","AGAAATACGATTTTAA",1,10.17,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","AGAAATACGCAATTGA",5,0.06,NA,NA,NA,NA,NA,NA,"stop","P7M F12*",2
"lib2","SARS-CoV-2","AGAAATACTCATTCAT",1,26.22,8.29,-2.55,0.17,1.5,1.15,0.01,">1 nonsynonymous","G86K Y143F",2
"lib2","SARS-CoV-2","AGAAATAGATATGATT",4,54.45,6,-4.84,2,3,1.22,0,">1 nonsynonymous","S129N G172H",2
"lib2","SARS-CoV-2","AGAAATAGATATTACG",9,4.79,NA,NA,NA,NA,NA,NA,"stop","P7I V20T Y66* P96Y V153L P161C T201N",7
"lib2","SARS-CoV-2","AGAAATAGCCATATAC",3,25.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5E T63L R124F Q144R T148Q",5
"lib2","SARS-CoV-2","AGAAATAGCGTTCGTC",1,51.76,8.09,-2.75,0.22,1.52,1.14,0.01,">1 nonsynonymous","E10Y N118L",2
"lib2","SARS-CoV-2","AGAAATAGGGAATATG",15,199.49,9.12,-1.72,0.05,1.86,1.1,0,">1 nonsynonymous","L38T I142F T201I",3
"lib2","SARS-CoV-2","AGAAATAGGTATAGAC",4,18.88,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T63F D90N C158G",3
"lib2","SARS-CoV-2","AGAAATAGTTAATAAA",2,52.25,10.16,-0.68,0.05,2.8,1.06,0,">1 nonsynonymous","T100K N107A",2
"lib2","SARS-CoV-2","AGAAATATAAGCGACT",1,15.64,6,-4.84,1.91,3,1.04,0,">1 nonsynonymous","S19K R124E",2
"lib2","SARS-CoV-2","AGAAATATAGGTAATC",4,0.51,NA,NA,NA,NA,NA,NA,"stop","L38F Y91*",2
"lib2","SARS-CoV-2","AGAAATATATAAGATA",1,8.17,10.53,-0.3,0.13,2.9,1.1,0.01,">1 nonsynonymous","D90S N130I",2
"lib2","SARS-CoV-2","AGAAATATCCAACAGA",10,53.29,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","L122P L131T",2
"lib2","SARS-CoV-2","AGAAATATCTATGAGT",6,62.82,10.68,-0.16,0.03,2.94,1.05,0,">1 nonsynonymous","S45H K56H",2
"lib2","SARS-CoV-2","AGAAATATCTTCTAAA",4,1.21,NA,NA,NA,NA,NA,NA,"stop","S41P S45L C61K Y91S A105R E154K S184*",7
"lib2","SARS-CoV-2","AGAAATATGAATCGAC",6,136.55,10.44,-0.39,0.05,2.88,1.04,0,">1 nonsynonymous","N58A F160R",2
"lib2","SARS-CoV-2","AGAAATATGGAATATG",17,168.42,9.21,-1.63,0.09,1.96,1.09,0,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","AGAAATATGGTATGGA",5,42.14,8.33,-2.51,0.22,1.5,1.18,0.01,">1 nonsynonymous","T3V A42P T55N K128D D137Y",5
"lib2","SARS-CoV-2","AGAAATATGTACAATC",1,60.89,10.3,-0.53,0.05,2.92,1.06,0,">1 nonsynonymous","C61S R136L",2
"lib2","SARS-CoV-2","AGAAATATTAAAAGAC",3,12.33,10.8,-0.03,0.04,3,1.01,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","AGAAATATTGAAAAGA",1,38.47,10.74,-0.1,0.04,2.93,1.04,0,">1 nonsynonymous","N1R V115M",2
"lib2","SARS-CoV-2","AGAAATATTGACCGTA",4,37.86,10.75,-0.09,0.05,3,1,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","AGAAATCAACTAAATT",12,205.47,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D68R A89T Q163L",3
"lib2","SARS-CoV-2","AGAAATCAATAACGAA",3,41.53,10.51,-0.33,0.03,2.9,1.09,0,">1 nonsynonymous","S45R T201M",2
"lib2","SARS-CoV-2","AGAAATCAATGGGCAT",20,125.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86I V103L",2
"lib2","SARS-CoV-2","AGAAATCAGTACCACT",2,10.5,8.74,-2.09,0.21,2.75,1.08,0.01,">1 nonsynonymous","D90M S113C",2
"lib2","SARS-CoV-2","AGAAATCCAATTAAAT",3,2.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","AGAAATCCTAAAAAAG",7,21.28,8.87,-1.96,0.36,1.5,1,0.07,">1 nonsynonymous","N13L N92V D112M K132A",4
"lib2","SARS-CoV-2","AGAAATCGAAATGTAT",4,2.48,NA,NA,NA,NA,NA,NA,"stop","D97Y N157*",2
"lib2","SARS-CoV-2","AGAAATCTATCATACC",4,79.25,10.61,-0.23,0.04,2.92,1.11,0,"1 nonsynonymous","I138R",1
"lib2","SARS-CoV-2","AGAAATCTTTAACCAT",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78N R127Y",2
"lib2","SARS-CoV-2","AGAAATGAAAGGACCA",2,6.16,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D90Y D97M N110H G116A I142T",5
"lib2","SARS-CoV-2","AGAAATGAAATAGGAT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E L122F N130S T140R G155L L162M V180F P191F",8
"lib2","SARS-CoV-2","AGAAATGAATTCAGGC",2,27.99,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V20L K56C Q84Y L122C N157T V173I",6
"lib2","SARS-CoV-2","AGAAATGACCGCAGGA",1,34.91,NA,NA,NA,NA,NA,NA,"stop","I104M T140H G146L V173*",4
"lib2","SARS-CoV-2","AGAAATGCCCAATGAA",15,48.38,7.98,-2.86,0.17,1.5,1.08,0.01,">1 nonsynonymous","T3P R16S R25M A42D N130A T201L",6
"lib2","SARS-CoV-2","AGAAATGCGAACAAGG",1,15.9,8.09,-2.75,0.23,1.5,1.02,0.02,">1 nonsynonymous","D98T R127Q",2
"lib2","SARS-CoV-2","AGAAATGGCCCGCTGA",2,32.69,10.23,-0.61,0.06,2.89,1.1,0,">1 nonsynonymous","I2D A81S S129I T201S",4
"lib2","SARS-CoV-2","AGAAATGGCTATAAAT",2,64.61,6,-4.84,2,3,1.17,0,">1 nonsynonymous","P7Y T46Q F99I N120T S184C S200L",6
"lib2","SARS-CoV-2","AGAAATGTAGTAATAG",2,57.34,9.81,-1.02,0.08,2.56,1.05,0,">1 nonsynonymous","C6S S29G I104Y P191N K199Y",5
"lib2","SARS-CoV-2","AGAAATGTATTTATGA",6,26.94,6,-4.84,2,3,1.23,0,">1 nonsynonymous","S45P D90T C158W T170F",4
"lib2","SARS-CoV-2","AGAAATGTTGTACATA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L Y121D",2
"lib2","SARS-CoV-2","AGAAATTACTCCCGGT",11,45.65,8.7,-2.14,0.14,1.6,1.08,0.01,">1 nonsynonymous","W106C K128M",2
"lib2","SARS-CoV-2","AGAAATTAGCAGTACA",1,13.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P96L L162F",2
"lib2","SARS-CoV-2","AGAAATTCAAGACACC",10,89.47,10.75,-0.09,0.07,2.92,1.07,0,"1 nonsynonymous","S139E",1
"lib2","SARS-CoV-2","AGAAATTCACAATTGA",4,49.64,7.49,-3.35,0.32,1.5,1.2,0.02,">1 nonsynonymous","I28R F134R",2
"lib2","SARS-CoV-2","AGAAATTCGAATACAG",9,45.84,8.16,-2.68,0.31,1.5,1.15,0.03,">1 nonsynonymous","T55L Y121D",2
"lib2","SARS-CoV-2","AGAAATTGAATACGTC",18,5.21,NA,NA,NA,NA,NA,NA,"stop","N4* G174R S184V",3
"lib2","SARS-CoV-2","AGAAATTGAGCAAACA",9,75.93,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I2L W23V Y35V Y50I I88R P96N R179F",7
"lib2","SARS-CoV-2","AGAAATTGATACTAGG",10,81.13,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G117T C158S",2
"lib2","SARS-CoV-2","AGAAATTGATCAAGAA",5,156.71,9.87,-0.97,0.05,2.95,1.06,0,"1 nonsynonymous","T170G",1
"lib2","SARS-CoV-2","AGAAATTTGAATAAAG",4,48.81,7.28,-3.56,0.3,1.5,1.14,0.02,">1 nonsynonymous","N1T E10T L38S K56T I72V E141L",6
"lib2","SARS-CoV-2","AGAAATTTTTTATACT",3,94.97,10.86,0.03,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACAAAAATAATTA",2,3.44,NA,NA,NA,NA,NA,NA,"stop","T85A V103* T148W F167S",4
"lib2","SARS-CoV-2","AGAACAAAAATATACT",1,1.57,NA,NA,NA,NA,NA,NA,"stop","N1* C6V N120V",3
"lib2","SARS-CoV-2","AGAACAAAACCAACCC",1,59.66,8.95,-1.89,0.07,2.91,1.05,0,"1 nonsynonymous","F167W",1
"lib2","SARS-CoV-2","AGAACAAAACCATATT",3,63.51,10.9,0.07,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAACAAAACGAACAT",16,297.91,9.94,-0.89,0.02,2.9,1.08,0,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","AGAACAAACACAAGCC",2,29.87,10.85,0.02,0.11,2.67,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGAACAAACTACAGAG",3,29.28,10.21,-0.62,0.08,2.36,1,0,">1 nonsynonymous","L60A D90G",2
"lib2","SARS-CoV-2","AGAACAAACTATCAAC",5,14.97,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C102R Q163L",2
"lib2","SARS-CoV-2","AGAACAAATAATTTTT",6,44.9,9.79,-1.04,0.04,2.34,1,0,">1 nonsynonymous","T15F S41I T46N",3
"lib2","SARS-CoV-2","AGAACAAATTCATTTA",9,230.56,10.01,-0.83,0.04,2.86,1.06,0,">1 nonsynonymous","L5V A33L N109Q N130R",4
"lib2","SARS-CoV-2","AGAACAAATTGAGAAT",1,11.95,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C6S P96T V103W",3
"lib2","SARS-CoV-2","AGAACAACAATTGAGG",3,42.32,10.44,-0.4,0.07,2.92,1.06,0,">1 nonsynonymous","S36Q N110L I138P",3
"lib2","SARS-CoV-2","AGAACAACACTTCAAG",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V V37F",2
"lib2","SARS-CoV-2","AGAACAACATAAATGT",1,10.5,9.32,-1.51,0.3,1.58,1.08,0.02,">1 nonsynonymous","V52E T85R R136L",3
"lib2","SARS-CoV-2","AGAACAACCCAAAGTC",1,10.82,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","L183A",1
"lib2","SARS-CoV-2","AGAACAACTACGGATT",2,48.03,7.94,-2.9,0.2,1.5,1.08,0.02,">1 nonsynonymous","L5S D90W N107V T201M",4
"lib2","SARS-CoV-2","AGAACAACTCTAAGTG",3,35.24,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L5E S36L Y50G K128S",4
"lib2","SARS-CoV-2","AGAACAAGACACATAA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K L122M L162D",3
"lib2","SARS-CoV-2","AGAACAAGATAGTCAA",3,0.87,NA,NA,NA,NA,NA,NA,"stop","K48P T55* Y93G",3
"lib2","SARS-CoV-2","AGAACAAGCCGCGAAG",4,40.62,6.18,-4.66,0.25,2.09,1.04,0,">1 nonsynonymous","D98E P177R",2
"lib2","SARS-CoV-2","AGAACAAGCCTTAAGG",6,0.33,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib2","SARS-CoV-2","AGAACAAGGTTTTTTT",5,40.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35K E76D F99N",3
"lib2","SARS-CoV-2","AGAACAAGTACGCCGA",4,32.59,7.94,-2.89,0.17,1.91,1.11,0.01,">1 nonsynonymous","A14T G146V",2
"lib2","SARS-CoV-2","AGAACAAGTATGTCCT",3,39.54,10.01,-0.83,0.13,2.54,1.03,0.01,">1 nonsynonymous","C6N N13K",2
"lib2","SARS-CoV-2","AGAACAAGTTTATTAC",4,51.21,7.53,-3.31,0.15,1.53,1.1,0.01,">1 nonsynonymous","I2R A81L N120T",3
"lib2","SARS-CoV-2","AGAACAAGTTTTGATT",7,60.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12V K87C I104K I142R",4
"lib2","SARS-CoV-2","AGAACAATACTATTGC",1,47.23,10.32,-0.52,0.07,2.84,1.08,0,">1 nonsynonymous","L5S A81V",2
"lib2","SARS-CoV-2","AGAACAATATATGTGA",14,252.5,10.51,-0.33,0.04,2.89,1.07,0,">1 nonsynonymous","L60G N120S",2
"lib2","SARS-CoV-2","AGAACAATCAAACGAA",3,53.58,9.83,-1,0.08,2.14,1.04,0,">1 nonsynonymous","A18R G83L K128L",3
"lib2","SARS-CoV-2","AGAACAATCAACTGTC",6,45.91,10.81,-0.03,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACAATCTAGTTAT",20,142.56,6,-4.84,2,2.54,1.16,0,">1 nonsynonymous","G9T N92L",2
"lib2","SARS-CoV-2","AGAACAATCTCTTTAT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","W23A T85P R127S L183*",4
"lib2","SARS-CoV-2","AGAACAATTCAGTCCT",5,47.32,8.94,-1.9,0.14,1.68,1.18,0.01,">1 nonsynonymous","T85L S139Y K199T",3
"lib2","SARS-CoV-2","AGAACAATTCGCATGA",16,136.51,9.59,-1.25,0.07,1.91,1.04,0,"1 nonsynonymous","R136D",1
"lib2","SARS-CoV-2","AGAACAATTGTATGCT",14,1.58,NA,NA,NA,NA,NA,NA,"stop","R78G Q84* S139G A190P",4
"lib2","SARS-CoV-2","AGAACACAAAATTTAA",22,8.67,NA,NA,NA,NA,NA,NA,"stop","F99* Y119* D137Q P149C",4
"lib2","SARS-CoV-2","AGAACACAATATTGTA",5,37.1,10.83,-0.01,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACACACAATACCA",5,19.44,6.24,-4.6,1.57,2.68,1.12,0.01,">1 nonsynonymous","N13V V20Q",2
"lib2","SARS-CoV-2","AGAACACACGATAAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N13L P82T G86D N92* N107P L122M R136I",7
"lib2","SARS-CoV-2","AGAACACACGTTCTGT",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P V103K Y143T",3
"lib2","SARS-CoV-2","AGAACACAGATACCAG",2,14.79,9.69,-1.14,0.19,2.4,1.01,0.01,">1 nonsynonymous","I88T S200F",2
"lib2","SARS-CoV-2","AGAACACAGATAGCAG",15,93.42,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V65P K87R I104M N157V",4
"lib2","SARS-CoV-2","AGAACACAGATCCAAG",7,10.72,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A14S C49F V71K D90S N118V",5
"lib2","SARS-CoV-2","AGAACACAGCAAGCAG",9,81.48,9.16,-1.67,0.05,2.84,1.15,0,">1 nonsynonymous","A145L L183M P197A",3
"lib2","SARS-CoV-2","AGAACACCAATCAGAC",10,228.46,8.33,-2.51,0.09,2.5,1.12,0,">1 nonsynonymous","A14C K87N S129A G166R",4
"lib2","SARS-CoV-2","AGAACACCCGATATCT",10,185.81,9.58,-1.25,0.07,1.87,1.05,0,">1 nonsynonymous","P54S W106V",2
"lib2","SARS-CoV-2","AGAACACCTGCACTAA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","A81* K94C",2
"lib2","SARS-CoV-2","AGAACACGAACAATTG",3,1.56,NA,NA,NA,NA,NA,NA,"stop","S45L Y50F Y143V N151*",4
"lib2","SARS-CoV-2","AGAACACGCAATTTTG",1,13.51,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Q84K G101S L122Y E135A",4
"lib2","SARS-CoV-2","AGAACACGCTAAGAGG",6,88,10.83,-0.01,0.04,2.91,1.09,0,"1 nonsynonymous","L60Y",1
"lib2","SARS-CoV-2","AGAACACGTTTCCGTA",7,63.72,10.65,-0.19,0.04,2.85,1.14,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","AGAACACTACATGAAG",3,65.85,6,-4.84,0.6,1.67,1.07,0,">1 nonsynonymous","R27E P161R",2
"lib2","SARS-CoV-2","AGAACACTCCCACCCG",5,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P I104Q Y121P",3
"lib2","SARS-CoV-2","AGAACACTCTATAACA",1,5.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C102Y P191R",2
"lib2","SARS-CoV-2","AGAACAGACAGAACAG",1,45.07,9.4,-1.44,0.07,2.91,1.08,0,">1 nonsynonymous","G83F N118S V173D",3
"lib2","SARS-CoV-2","AGAACAGATTATACTT",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A14T S45V N58M G86L L125I R136V G146S T201V",9
"lib2","SARS-CoV-2","AGAACAGCAAGCTCAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N L60N P96V R124K",4
"lib2","SARS-CoV-2","AGAACAGCCGACCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10V R73* T140L",3
"lib2","SARS-CoV-2","AGAACAGTGCCCAGTG",4,0.29,NA,NA,NA,NA,NA,NA,"stop","S19R P82* G86R",3
"lib2","SARS-CoV-2","AGAACATAAGTATACT",6,41.98,10.24,-0.59,0.08,2.5,1.05,0,">1 nonsynonymous","N13Q P149F",2
"lib2","SARS-CoV-2","AGAACATAATACAATA",4,25.89,6,-4.84,2,2.95,1.23,0.01,">1 nonsynonymous","D68W I88R K94R A105H K128W",5
"lib2","SARS-CoV-2","AGAACATAATTTAGGA",2,28.43,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","W106C R124T C150R F160K A190R",5
"lib2","SARS-CoV-2","AGAACATACAACAAGT",6,36.2,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","A22F N92K",2
"lib2","SARS-CoV-2","AGAACATAGATTTAAA",5,67.07,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","L131K Q163C F167R",3
"lib2","SARS-CoV-2","AGAACATATTTCGTGT",3,27.3,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","L5D V11T W106H Q168P",4
"lib2","SARS-CoV-2","AGAACATCCGCAAAAT",9,31.04,6,-4.84,0.67,2.87,1.11,0,">1 nonsynonymous","C61A P96F Y119N E141N",4
"lib2","SARS-CoV-2","AGAACATCCTACCGTA",2,11.07,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","C6K C61S D68P F156T",4
"lib2","SARS-CoV-2","AGAACATGCCAAGGAA",6,0.81,NA,NA,NA,NA,NA,NA,"stop","C6P T63S I80Q D90L L122S S164*",6
"lib2","SARS-CoV-2","AGAACATGTGTCTAAG",7,49.13,6,-4.84,0.97,1.5,1.12,0.01,">1 nonsynonymous","P82K P177W",2
"lib2","SARS-CoV-2","AGAACATTAAGGATTA",7,46.39,9.93,-0.9,0.06,2.28,1.06,0,">1 nonsynonymous","R136A P149R",2
"lib2","SARS-CoV-2","AGAACATTAGTTTTAG",2,10.79,9.87,-0.97,0.13,2.2,1.05,0,">1 nonsynonymous","N13V S29T",2
"lib2","SARS-CoV-2","AGAACATTCCTTTGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* K94W C150V R179Q",4
"lib2","SARS-CoV-2","AGAACATTGATCACTA",7,196.17,10.82,-0.02,0.03,2.92,1.09,0,"1 nonsynonymous","N120E",1
"lib2","SARS-CoV-2","AGAACCAAAGTAAAAA",5,104.3,6,-4.84,1.46,1.5,1.15,0.01,">1 nonsynonymous","V11G R25V D68H R124V D137G F156L",6
"lib2","SARS-CoV-2","AGAACCAACAGTAAAA",10,62.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12N S36E I88A G117T",4
"lib2","SARS-CoV-2","AGAACCAAGACTTAAC",2,27.72,10.55,-0.28,0.09,2.99,1.03,0,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","AGAACCAAGGTTGAAA",5,22.58,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S29K W106V G116N R136L",4
"lib2","SARS-CoV-2","AGAACCACCAAACAAA",2,34.39,10.55,-0.28,0.08,2.84,1.17,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","AGAACCACCCCATCTA",2,19.28,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","A14R R136Y G166R P177R T201P",5
"lib2","SARS-CoV-2","AGAACCACCTGCCAAA",4,22.97,10.59,-0.25,0.08,2.88,1.16,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","AGAACCACTACAGTAT",8,121.65,6.87,-3.97,0.19,1.5,1.12,0.01,">1 nonsynonymous","F62Y R73W",2
"lib2","SARS-CoV-2","AGAACCAGAAAAATCT",4,52.44,9.03,-1.8,0.07,2.6,1.1,0,">1 nonsynonymous","G9T G74R",2
"lib2","SARS-CoV-2","AGAACCAGGCTTACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102H G117R E141G",3
"lib2","SARS-CoV-2","AGAACCAGTTCTATTA",2,32.68,10.83,-0.01,0.06,3,1.02,0,"1 nonsynonymous","K199I",1
"lib2","SARS-CoV-2","AGAACCATGGTACTGA",3,54.67,10.18,-0.65,0.06,2.79,1.08,0,">1 nonsynonymous","T85G D98I V173L",3
"lib2","SARS-CoV-2","AGAACCATGGTCAATT",15,236.66,10.78,-0.06,0.04,2.91,1.1,0,"1 nonsynonymous","D97K",1
"lib2","SARS-CoV-2","AGAACCATGTCTTATA",15,55,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A14L F44V Y91R Q144R G166N",5
"lib2","SARS-CoV-2","AGAACCATTACCATAA",2,58.33,8.18,-2.65,0.21,2.17,1.12,0.02,">1 nonsynonymous","L122G G146L",2
"lib2","SARS-CoV-2","AGAACCATTTTAACTG",10,55.57,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","F8I A22C P96S N120H G155Y",5
"lib2","SARS-CoV-2","AGAACCCAATTTCCAA",7,70.74,10.08,-0.76,0.08,2.39,1.01,0,">1 nonsynonymous","D97R F167Y",2
"lib2","SARS-CoV-2","AGAACCCACAGAGAAG",6,0.85,NA,NA,NA,NA,NA,NA,"stop","E10* R16C I142P S184V",4
"lib2","SARS-CoV-2","AGAACCCAGCAATAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","L95M L122*",2
"lib2","SARS-CoV-2","AGAACCCAGCTTACGT",2,27.08,11.17,0.33,0.05,3,1,0,">1 nonsynonymous","P54R Y123K",2
"lib2","SARS-CoV-2","AGAACCCAGGCGGTAC",11,89.64,10.86,0.02,0.06,2.93,1.07,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","AGAACCCATTGGCATA",2,21.79,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","L57A L95T",2
"lib2","SARS-CoV-2","AGAACCCCAAGCTAAG",1,18.36,10.18,-0.66,0.1,2.72,1.07,0.01,">1 nonsynonymous","A105T T148W",2
"lib2","SARS-CoV-2","AGAACCCCACCAGCCA",3,47.9,7.88,-2.95,0.08,1.74,1.08,0,">1 nonsynonymous","K87N G116W R136S C195S",4
"lib2","SARS-CoV-2","AGAACCCCACTCGAAA",20,252.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D90R D137R P177L K199W",4
"lib2","SARS-CoV-2","AGAACCCCCAAAGGTA",5,48.05,6,-4.84,1.16,3,1.12,0,">1 nonsynonymous","I88V F99S",2
"lib2","SARS-CoV-2","AGAACCCCGAGCATTT",4,9.66,6.31,-4.53,0.73,1.5,1.15,0.02,">1 nonsynonymous","D90F N107R E135T",3
"lib2","SARS-CoV-2","AGAACCCCTAGAACCG",10,54.55,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L95R G174D",2
"lib2","SARS-CoV-2","AGAACCCCTCCCGTAA",2,12.74,9.66,-1.18,0.07,3,1,0,">1 nonsynonymous","N118Q F156Y",2
"lib2","SARS-CoV-2","AGAACCCGAATCTGCT",18,166.14,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T3V G83C L95Q Y175P A190G",5
"lib2","SARS-CoV-2","AGAACCCGCCAGATGA",5,47.24,10.77,-0.07,0.1,2.85,1.16,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","AGAACCCTAGTAGCCG",12,132.97,6.05,-4.78,1.05,1.5,1.24,0.02,">1 nonsynonymous","D34K V115K Y143N V153H",4
"lib2","SARS-CoV-2","AGAACCGAACACGATA",4,45.49,10.25,-0.58,0.08,2.77,1.09,0,">1 nonsynonymous","S41I T63Q T85I",3
"lib2","SARS-CoV-2","AGAACCGAACCTAGCA",9,88.13,10.16,-0.67,0.03,2.95,1.06,0,">1 nonsynonymous","K26T A81C F156V",3
"lib2","SARS-CoV-2","AGAACCGAAGCATAAT",1,23.32,10.66,-0.18,0.08,3,1.03,0,">1 nonsynonymous","N1S A18P N40R G83R",4
"lib2","SARS-CoV-2","AGAACCGAGATTCCAA",12,1421.46,10.54,-0.3,0.03,2.94,1.04,0,"1 nonsynonymous","G9I",1
"lib2","SARS-CoV-2","AGAACCGTGAAAAAAG",8,75,9.47,-1.37,0.1,1.83,1.07,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","AGAACCGTGATGACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6I K87*",2
"lib2","SARS-CoV-2","AGAACCGTGCGCATAG",3,27.69,10.8,-0.04,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACCTAAAAAAAAC",3,10.35,8.05,-2.79,0.32,1.53,1.15,0.04,">1 nonsynonymous","G9R G83I V103I N130L",4
"lib2","SARS-CoV-2","AGAACCTCAAAATATG",9,33.03,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N1Y P133T C158T",3
"lib2","SARS-CoV-2","AGAACCTGAAATTAAA",5,53.87,6,-4.84,1.08,1.5,1.11,0.01,">1 nonsynonymous","S45P A67N L131F",3
"lib2","SARS-CoV-2","AGAACCTGAAATTTCA",10,38.2,10.84,0,0.05,2.94,1.06,0,">1 nonsynonymous","R16S K56S G83N",3
"lib2","SARS-CoV-2","AGAACCTTAGCGCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3F A22T S41*",3
"lib2","SARS-CoV-2","AGAACCTTCGGTAGCT",2,111.76,9.03,-1.8,0.06,2.93,1.09,0,">1 nonsynonymous","K87T Y143I",2
"lib2","SARS-CoV-2","AGAACGAAAAAATGGG",19,89.03,8.19,-2.64,0.31,1.5,1,0.03,">1 nonsynonymous","N4R P96S Y121K T140I",4
"lib2","SARS-CoV-2","AGAACGAAAACCCCCA",1,16.03,9.81,-1.03,0.16,2.09,1.09,0.01,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","AGAACGAACTAACTTG",14,211.19,10.96,0.13,0.06,2.95,1.06,0,"1 nonsynonymous","Y35W",1
"lib2","SARS-CoV-2","AGAACGACAGACAGCA",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S I88E N120L P149Q",4
"lib2","SARS-CoV-2","AGAACGACATCGACAG",1,34.66,9.38,-1.46,0.09,2.97,1.04,0.01,"1 nonsynonymous","Q176A",1
"lib2","SARS-CoV-2","AGAACGACCTCAACGG",21,170.86,9.94,-0.9,0.06,2.13,1.08,0,">1 nonsynonymous","L5N Q84W",2
"lib2","SARS-CoV-2","AGAACGACTAAGTGCC",13,146.41,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51V Y66S Y143M G174T",4
"lib2","SARS-CoV-2","AGAACGAGCATTATAT",4,42.01,10.54,-0.3,0.05,2.91,1.08,0,">1 nonsynonymous","K94H K198E",2
"lib2","SARS-CoV-2","AGAACGATGGCCGACT",1,72.2,10.14,-0.69,0.02,2.97,1.01,0,">1 nonsynonymous","S139R E154V",2
"lib2","SARS-CoV-2","AGAACGATTCTTGAAC",3,38.44,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F8L S69L A145W N157I",4
"lib2","SARS-CoV-2","AGAACGCATAGACATA",6,59.52,9.33,-1.51,0.11,2.51,1.05,0,">1 nonsynonymous","N64T K114E Y121V S129G",4
"lib2","SARS-CoV-2","AGAACGCATTCGTTGA",6,27.64,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","AGAACGCCCCAGTGAA",5,83.26,9.81,-1.03,0.06,2.75,1,0,">1 nonsynonymous","E76A Y175H",2
"lib2","SARS-CoV-2","AGAACGCCCTTACTGT",6,34.41,9.76,-1.07,0.08,2.8,1.14,0,">1 nonsynonymous","K56R T170F",2
"lib2","SARS-CoV-2","AGAACGCCTATCGCAT",6,57.03,7.68,-3.16,0.3,1.5,1.07,0.03,">1 nonsynonymous","V20G L60S",2
"lib2","SARS-CoV-2","AGAACGCGAAAATAGA",1,38.22,10.23,-0.6,0.06,2.69,1.08,0,"1 nonsynonymous","L57E",1
"lib2","SARS-CoV-2","AGAACGCGAATGCAAA",6,69.04,8.25,-2.59,0.17,2.08,1.01,0.01,">1 nonsynonymous","F44A G146S N151L N157S",4
"lib2","SARS-CoV-2","AGAACGCGACACGCCG",1,7.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K F99H",2
"lib2","SARS-CoV-2","AGAACGCGATTAATGT",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y V103A",2
"lib2","SARS-CoV-2","AGAACGCGCTATTTTG",6,78.51,10.23,-0.61,0.04,2.83,1.03,0,">1 nonsynonymous","Y39P G83F N151F",3
"lib2","SARS-CoV-2","AGAACGCTACGATATA",3,50.54,10.67,-0.16,0.05,2.96,1.08,0,">1 nonsynonymous","L5H L95V",2
"lib2","SARS-CoV-2","AGAACGCTCACATGGG",8,0.39,NA,NA,NA,NA,NA,NA,"stop","L5N G74F N120* K132G G166T",5
"lib2","SARS-CoV-2","AGAACGCTGACCTAAA",10,91.84,10.79,-0.04,0.04,2.9,1.11,0,">1 nonsynonymous","D59M L122K P169T S200A",4
"lib2","SARS-CoV-2","AGAACGGAAAAAATTC",3,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F N13K T55L Y121L G152P S200R",6
"lib2","SARS-CoV-2","AGAACGGAAACCGACT",12,115.69,6,-4.84,1.52,1.5,1.24,0.01,">1 nonsynonymous","N24F C31A K56E D98F P161L",5
"lib2","SARS-CoV-2","AGAACGGAACGTGAAA",3,13.61,7.27,-3.56,0.32,1.5,1.12,0.03,">1 nonsynonymous","G9R K94E N151H",3
"lib2","SARS-CoV-2","AGAACGGTGGCGTATG",8,95.81,9.35,-1.49,0.05,2.78,1.07,0,">1 nonsynonymous","A33V N118L",2
"lib2","SARS-CoV-2","AGAACGTATTCCTAGT",6,52.81,8.27,-2.57,0.17,1.86,1.13,0.01,">1 nonsynonymous","Y91D F156I",2
"lib2","SARS-CoV-2","AGAACGTGCAAACAAC",10,131.09,10.85,0.01,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACGTGTCCGTTAT",2,2.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","AGAACGTGTTCAACCG",1,14.54,9.6,-1.24,0.17,2.09,1.01,0.01,">1 nonsynonymous","C49F K128I T201D",3
"lib2","SARS-CoV-2","AGAACTAAAACGCCGA",2,9.34,6,-4.84,2,1.5,1.11,0.07,">1 nonsynonymous","R27K D59Y F167A",3
"lib2","SARS-CoV-2","AGAACTAAAAGACCCT",3,64.52,8.18,-2.66,0.09,2.27,1.04,0,">1 nonsynonymous","G117L G152L",2
"lib2","SARS-CoV-2","AGAACTAAAATAATCC",10,157.47,10.76,-0.08,0.03,2.98,1.03,0,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","AGAACTAACTGAAACA",2,46,10.83,-0.01,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAACTAAGCTTAGCC",2,44.29,6.85,-3.99,0.21,1.5,1.1,0.01,">1 nonsynonymous","S19V R127L",2
"lib2","SARS-CoV-2","AGAACTAATACTGTAC",2,22.53,9.14,-1.69,0.31,1.5,1.01,0.03,">1 nonsynonymous","R27M A33P I72M",3
"lib2","SARS-CoV-2","AGAACTAATTATCGAT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","L5* C61L K94Q A105L",4
"lib2","SARS-CoV-2","AGAACTACGCTAAATC",2,19.03,10.14,-0.69,0.08,2.05,1.11,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","AGAACTACTGTACACT",5,130.66,10.63,-0.2,0.03,2.93,1.08,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","AGAACTATAAACACCG",3,5.66,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","Y21R S41Y F44H L57K G86C",5
"lib2","SARS-CoV-2","AGAACTATAGACCTAT",6,22.69,6.99,-3.84,0.6,1.5,1.17,0.06,">1 nonsynonymous","D90N F99D Q168S",3
"lib2","SARS-CoV-2","AGAACTATCCACTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35S S69* L95R T201L",4
"lib2","SARS-CoV-2","AGAACTATCGTCTACG",5,14.95,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F8T F12V C49Y R73S G146E",5
"lib2","SARS-CoV-2","AGAACTATTTTGTCAG",4,68.33,10.72,-0.12,0.04,2.87,1.15,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AGAACTCAAAATTACA",13,48.14,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V103G Y121H",2
"lib2","SARS-CoV-2","AGAACTCAAATCGGCC",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L T15N P82S K87V L122K K128L N151Y",7
"lib2","SARS-CoV-2","AGAACTCAACACAAAC",3,18.44,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G116C F167L",2
"lib2","SARS-CoV-2","AGAACTCACAATCATT",3,7.67,6,-4.84,2,1.5,1,0,">1 nonsynonymous","C61M L95T G101Y",3
"lib2","SARS-CoV-2","AGAACTCACATCACAG",2,45.97,10.37,-0.47,0.05,2.89,1.05,0,">1 nonsynonymous","E10S D90L",2
"lib2","SARS-CoV-2","AGAACTCAGACCGGCC",2,9.95,10.89,0.05,0.1,2.93,1.07,0,">1 nonsynonymous","P54L K114H T201W",3
"lib2","SARS-CoV-2","AGAACTCAGGCGGACA",5,3.9,NA,NA,NA,NA,NA,NA,"stop","C31R S36K G51N C61Y N110H K128L E154*",7
"lib2","SARS-CoV-2","AGAACTCATAATAACA",2,48.41,10.45,-0.38,0.05,2.97,1,0,">1 nonsynonymous","A81S T100Q",2
"lib2","SARS-CoV-2","AGAACTCATTGGGAAG",4,17.09,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N4T C61E G101S",3
"lib2","SARS-CoV-2","AGAACTCCACAAGTTC",2,10.7,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F12R T55K T100S I142A P149R",5
"lib2","SARS-CoV-2","AGAACTCGCGCCAACG",9,73.07,8.38,-2.46,0.12,2.08,1.1,0.01,">1 nonsynonymous","V37P Y50H K56L F126H",4
"lib2","SARS-CoV-2","AGAACTCTGGACACTT",14,315.42,9.68,-1.15,0.02,2.94,1.05,0,"1 nonsynonymous","R73A",1
"lib2","SARS-CoV-2","AGAACTCTGTACCACG",4,3.91,NA,NA,NA,NA,NA,NA,"stop","G9* Y93T N107C Y121L F134S Y143L V173G",7
"lib2","SARS-CoV-2","AGAACTCTTCTGCATT",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I S41V K56D K114L S139H L183S",6
"lib2","SARS-CoV-2","AGAACTGAACGCTCCG",10,112.26,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P96T N171P",2
"lib2","SARS-CoV-2","AGAACTGATCAGTTAT",3,60.75,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y35D P96T N107T",3
"lib2","SARS-CoV-2","AGAACTGCACGAAAGG",18,438.21,10.49,-0.34,0.03,2.93,1.07,0,">1 nonsynonymous","N1P G174M",2
"lib2","SARS-CoV-2","AGAACTGCACTGTGAA",11,91.64,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S45N R124I",2
"lib2","SARS-CoV-2","AGAACTGCCTTTTTGT",13,150.53,6,-4.84,1.13,1.5,1.18,0.01,">1 nonsynonymous","F17K V37N G83S Q144S",4
"lib2","SARS-CoV-2","AGAACTGGAACACTAA",3,13.06,6,-4.84,2,3,1.08,0,">1 nonsynonymous","D90V S113L",2
"lib2","SARS-CoV-2","AGAACTGGCCATAAGG",2,21.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T55P G83I Y91L S184R",4
"lib2","SARS-CoV-2","AGAACTGTGGACTAAA",13,92.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45Y Y93V L122A",3
"lib2","SARS-CoV-2","AGAACTTACCGAATGC",1,14.97,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","L57C P96L N107Y",3
"lib2","SARS-CoV-2","AGAACTTAGAGATACA",2,55.14,10.08,-0.75,0.13,2.36,1.01,0.01,">1 nonsynonymous","N30S T55A G83T",3
"lib2","SARS-CoV-2","AGAACTTAGTATTATT",6,56.34,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L5G R25S N92Q D98G",4
"lib2","SARS-CoV-2","AGAACTTATCTAGTCA",2,96.34,10.38,-0.45,0.05,2.82,1.05,0,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","AGAACTTCCCCTAGCG",5,42.22,7.43,-3.4,0.27,1.5,1.18,0.02,">1 nonsynonymous","N40I Y91Q",2
"lib2","SARS-CoV-2","AGAACTTCGTAACTGA",11,54.67,6.13,-4.7,0.61,1.5,1.14,0.01,">1 nonsynonymous","P7A N92M",2
"lib2","SARS-CoV-2","AGAACTTCTTGGAAAC",5,42.54,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F8H D98L N151Y C158L",4
"lib2","SARS-CoV-2","AGAACTTGAAAAAGGT",4,70.33,9.96,-0.88,0.09,2.5,1.03,0,">1 nonsynonymous","Y91V Q163H",2
"lib2","SARS-CoV-2","AGAACTTGATATGACT",2,13.7,8.6,-2.24,0.2,1.81,1.03,0.02,">1 nonsynonymous","L5K A81I D98L",3
"lib2","SARS-CoV-2","AGAACTTGATGCGAAG",1,6.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95D V103R",2
"lib2","SARS-CoV-2","AGAACTTGCACAGCCT",4,37.09,8.61,-2.22,0.16,2.08,1.04,0.01,">1 nonsynonymous","G9R Y91K Y119Q G174A",4
"lib2","SARS-CoV-2","AGAACTTTGTTCTATC",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V F44N F99T G146K Y175W",5
"lib2","SARS-CoV-2","AGAAGAAAATAGTCAA",1,46.71,10.75,-0.09,0.04,2.91,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGAAACAACCAGG",10,55.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51M E154V V182G",3
"lib2","SARS-CoV-2","AGAAGAAACCTAAAGG",4,32.37,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C6Y A14L S45A G74F A105M",5
"lib2","SARS-CoV-2","AGAAGAAACCTAATAC",7,119.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14T S29P D90F L125T F134I",5
"lib2","SARS-CoV-2","AGAAGAAACGGTCTGT",2,16.3,8.6,-2.24,0.28,2.15,1.11,0.05,">1 nonsynonymous","G83Y G117H T140G",3
"lib2","SARS-CoV-2","AGAAGAAAGTAAACAA",10,19.47,6.3,-4.54,0.49,3,1.17,0.01,">1 nonsynonymous","V11S F17R S41I K56Y Y66N I138K",6
"lib2","SARS-CoV-2","AGAAGAAATCGGATTT",6,51.83,8.81,-2.03,0.44,1.5,1.11,0.07,">1 nonsynonymous","A14D P82W L95M F156S F160R",5
"lib2","SARS-CoV-2","AGAAGAAATTAGTGAG",7,69.54,8.42,-2.42,0.09,1.95,1.11,0,">1 nonsynonymous","Y35T G74S",2
"lib2","SARS-CoV-2","AGAAGAACACGAACTA",5,48.93,10.59,-0.24,0.04,2.87,1.11,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","AGAAGAACATAATGTC",8,129.23,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V32M G83S I88L G146V Y159L Y175T",6
"lib2","SARS-CoV-2","AGAAGAACCTCAACCC",1,30.28,10.6,-0.24,0.06,2.97,1.01,0,">1 nonsynonymous","T3K G9T K56R S147Y",4
"lib2","SARS-CoV-2","AGAAGAACCTTTTATT",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64V L95K",2
"lib2","SARS-CoV-2","AGAAGAAGAGGTACGT",1,2.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V153S",1
"lib2","SARS-CoV-2","AGAAGAAGCAGAGAGC",11,151.82,9.6,-1.24,0.06,1.99,1.07,0,"1 nonsynonymous","F8N",1
"lib2","SARS-CoV-2","AGAAGAAGTTCACGCT",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGAATAAAAAATT",5,26.4,10.58,-0.26,0.09,2.72,1.27,0,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","AGAAGAATAGTAATTT",6,0.28,NA,NA,NA,NA,NA,NA,"stop","N4H G9* Y91T",3
"lib2","SARS-CoV-2","AGAAGAATATACTATC",2,41.23,10.48,-0.36,0.05,2.91,1.1,0,">1 nonsynonymous","S43F K87T D97R G146S",4
"lib2","SARS-CoV-2","AGAAGAATCAACACGT",8,152.83,6,-4.84,2,3,1.16,0,"1 nonsynonymous","Y159T",1
"lib2","SARS-CoV-2","AGAAGAATCATAACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S36L Q168*",2
"lib2","SARS-CoV-2","AGAAGAATTGTTCTAG",3,11.77,6,-4.84,2,1.5,1.08,0.07,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","AGAAGACATTCCAATG",4,28.7,10.33,-0.5,0.07,2.96,1,0,">1 nonsynonymous","N107C T148M",2
"lib2","SARS-CoV-2","AGAAGACATTTACAAA",8,72.27,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Q84H L131W",2
"lib2","SARS-CoV-2","AGAAGACCAATCGTAC",3,12.72,9.75,-1.09,0.18,2.28,1.01,0.02,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","AGAAGACCCGGTTCCG",1,38.09,9.62,-1.22,0.08,2.03,1.02,0,">1 nonsynonymous","I28L S45I N64I",3
"lib2","SARS-CoV-2","AGAAGACCGCGATAAA",1,26.92,6.97,-3.87,0.35,1.5,1.24,0.03,">1 nonsynonymous","E76V V77M T85R V103N A145F S164L",6
"lib2","SARS-CoV-2","AGAAGACCTAAATCAT",8,29.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6G D90L L122V D137S",4
"lib2","SARS-CoV-2","AGAAGACCTAGGTTAC",4,0.59,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","AGAAGACCTTATTATT",5,56.41,10.7,-0.13,0.04,2.93,1.1,0,">1 nonsynonymous","Y35M D97I E141S",3
"lib2","SARS-CoV-2","AGAAGACTAAAATCTA",3,46.59,10.82,-0.02,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGACTCCAGTAAG",9,30.03,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R25T F99P V103S",3
"lib2","SARS-CoV-2","AGAAGACTCTCTGCAT",4,20.16,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S69E L95D P149V G155R A190T",5
"lib2","SARS-CoV-2","AGAAGACTTTTGGTTC",8,114.65,10.73,-0.1,0.05,2.9,1.08,0,">1 nonsynonymous","I2L K56M P149L",3
"lib2","SARS-CoV-2","AGAAGAGAAATTGATG",4,83.99,10.78,-0.06,0.04,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAGAGACAAAAAAT",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G I142S",2
"lib2","SARS-CoV-2","AGAAGAGAGGGTTCAG",1,1.99,NA,NA,NA,NA,NA,NA,"stop","T85F D98V L122*",3
"lib2","SARS-CoV-2","AGAAGAGCAAAACTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","F12S V32I S36* D90R",4
"lib2","SARS-CoV-2","AGAAGAGGACCTGAAA",2,18.3,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N1L V103F",2
"lib2","SARS-CoV-2","AGAAGAGTACATAGCA",4,70.43,10.87,0.03,0.03,2.93,1.07,0,"1 nonsynonymous","T63S",1
"lib2","SARS-CoV-2","AGAAGATAAAAAGGAT",1,41.26,10.89,0.06,0.04,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAAGATACAATTTGA",4,36.69,10.89,0.06,0.07,2.94,1.02,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","AGAAGATAGGGTAAAC",10,88.54,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G51I G117F G174K",3
"lib2","SARS-CoV-2","AGAAGATGATGATTAA",1,7.57,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","G51D L60C N107R S113M I142S",5
"lib2","SARS-CoV-2","AGAAGATGATGTTTAA",5,41.19,9.03,-1.81,0.34,1.71,1.13,0.05,">1 nonsynonymous","N1A W106L N118L",3
"lib2","SARS-CoV-2","AGAAGATGGGAAAACC",7,15.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15I N107S I142P F160L",4
"lib2","SARS-CoV-2","AGAAGATTAAGCGTAT",12,43.76,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","A67N G117A F167R",3
"lib2","SARS-CoV-2","AGAAGATTGAAAATAA",2,65.76,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T100D C158S K198A",3
"lib2","SARS-CoV-2","AGAAGATTGAAGATTG",5,1.79,NA,NA,NA,NA,NA,NA,"stop","P7A N64* F70K T85Q S129E F160K",6
"lib2","SARS-CoV-2","AGAAGATTTTTAGAGA",3,12.28,9.58,-1.26,0.26,2.78,1.03,0.04,">1 nonsynonymous","T3F T63L Y119R S200Y",4
"lib2","SARS-CoV-2","AGAAGCAACCAAAAAA",3,46.21,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","K26P F99S R136K",3
"lib2","SARS-CoV-2","AGAAGCAACGTTTATA",1,6.84,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F62R V71E G116L F160V Q176M",5
"lib2","SARS-CoV-2","AGAAGCAATAAATTAT",4,10.67,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14S S43F T63F I88L Y93C P149T T201A",7
"lib2","SARS-CoV-2","AGAAGCACATCCATAG",2,48.34,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39W G86R F126Y",3
"lib2","SARS-CoV-2","AGAAGCACATCTTGAA",6,5.91,NA,NA,NA,NA,NA,NA,"stop","L57A P96N A105W K132S G172*",5
"lib2","SARS-CoV-2","AGAAGCACTACGTTAC",16,8.83,9.08,-1.75,0.25,2.68,1.13,0.02,">1 nonsynonymous","V20R N157D",2
"lib2","SARS-CoV-2","AGAAGCAGGTGTAATA",10,107.51,10.8,-0.04,0.06,2.92,1.07,0,">1 nonsynonymous","V65I L187Y",2
"lib2","SARS-CoV-2","AGAAGCATGGATATAA",3,100.18,7.6,-3.23,0.19,1.5,1.11,0.01,">1 nonsynonymous","T3F T85R N107P G116Q P177A",5
"lib2","SARS-CoV-2","AGAAGCATTCAAAAAT",3,20.34,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K114E C150W G174K",3
"lib2","SARS-CoV-2","AGAAGCCATACATTGA",10,57.18,10.82,-0.01,0.05,2.94,1.06,0,">1 nonsynonymous","V32Y N151K",2
"lib2","SARS-CoV-2","AGAAGCCATGTGAAGA",3,129.02,10.78,-0.06,0.05,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGCCCACGGCTAC",2,36.56,6.17,-4.67,0.57,1.5,1.18,0.02,">1 nonsynonymous","S45T Y93S G101A G117A G146V Q176K",6
"lib2","SARS-CoV-2","AGAAGCCCTCTGAGGC",3,18.81,11.07,0.24,0.08,2.81,1.19,0,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","AGAAGCCGAACTGTAC",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86M F160D",2
"lib2","SARS-CoV-2","AGAAGCCGCCTGAATG",2,17.72,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","N13Y D59L T100G G116F",4
"lib2","SARS-CoV-2","AGAAGCCTTATAACCA",6,107.97,10.16,-0.68,0.05,2.73,1.06,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","AGAAGCCTTCCTCCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T R25I R27P C49L K87Q C158A",6
"lib2","SARS-CoV-2","AGAAGCCTTTTACGAT",6,72.84,6,-4.84,1.66,3,1.09,0,">1 nonsynonymous","F12I A145D P169G",3
"lib2","SARS-CoV-2","AGAAGCGCAGCAACAC",6,70.97,10.53,-0.31,0.05,2.82,1.15,0,">1 nonsynonymous","T100H Y123S S184I P197T",4
"lib2","SARS-CoV-2","AGAAGCGTACGCAAAA",3,17.72,7.3,-3.54,0.33,1.5,1.08,0.03,">1 nonsynonymous","N64I K94Y G116S K128V N171Y",5
"lib2","SARS-CoV-2","AGAAGCGTCACGAATC",17,133.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5T G51A W106L A145T Q168R",5
"lib2","SARS-CoV-2","AGAAGCGTGTAAGGGT",1,35.98,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19K G146L",2
"lib2","SARS-CoV-2","AGAAGCGTGTTGTACT",9,100.61,9.48,-1.36,0.04,2.94,1.06,0,">1 nonsynonymous","Q84E F126I",2
"lib2","SARS-CoV-2","AGAAGCGTTTGATTAT",4,29.72,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D68V K94F L122P T140L",4
"lib2","SARS-CoV-2","AGAAGCTAATTATACA",5,60.47,10.86,0.02,0.07,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGCTACACCTAAA",12,133.19,10.05,-0.79,0.07,2.57,1.03,0,">1 nonsynonymous","N64E P96N N110Y E186G",4
"lib2","SARS-CoV-2","AGAAGCTGACAATACC",5,56.21,10.92,0.08,0.05,3,1.01,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","AGAAGCTGATATAACA",2,83.74,9.49,-1.34,0.08,2.51,1.09,0,">1 nonsynonymous","C6D N58S Y178W",3
"lib2","SARS-CoV-2","AGAAGCTGCCTTGGGA",1,30,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V20H N58I P96D N107L Q163P",5
"lib2","SARS-CoV-2","AGAAGCTTTAACAGAC",10,54.69,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T46S I88G T140W P161L",4
"lib2","SARS-CoV-2","AGAAGGAAAGACTCAC",1,36.81,8.27,-2.56,0.2,1.56,1.07,0.02,">1 nonsynonymous","P82T Y119K",2
"lib2","SARS-CoV-2","AGAAGGAACAACTTAC",3,43.4,10.73,-0.11,0.04,2.99,1.03,0,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","AGAAGGACAAGACAAG",3,15.73,6.93,-3.9,0.49,1.5,1.15,0.02,">1 nonsynonymous","R16G R127C",2
"lib2","SARS-CoV-2","AGAAGGACAAGACATC",25,148.73,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y50M P96K",2
"lib2","SARS-CoV-2","AGAAGGACAAGCAACA",7,45.53,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C49K T100Y K114L S129L",4
"lib2","SARS-CoV-2","AGAAGGACCATAAAAT",2,15.41,9.1,-1.73,0.24,1.86,1.22,0.03,"1 nonsynonymous","N13P",1
"lib2","SARS-CoV-2","AGAAGGAGTGAAACCA",2,70.28,10.62,-0.22,0.03,2.92,1.05,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","AGAAGGATAAGCACAA",9,117.81,10.74,-0.1,0.06,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGGATTCTCCTTA",9,64.38,10.72,-0.12,0.07,2.88,1.06,0,">1 nonsynonymous","A42P D90S",2
"lib2","SARS-CoV-2","AGAAGGATTTTTAATA",3,207.55,10.14,-0.7,0.06,2.72,1.04,0,">1 nonsynonymous","N64L F134E T201K",3
"lib2","SARS-CoV-2","AGAAGGCAGAGAATCT",12,112.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A14T K94S D137Y A145G",4
"lib2","SARS-CoV-2","AGAAGGCAGTATTTAA",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y P82L G86I F156R",4
"lib2","SARS-CoV-2","AGAAGGCCAACGCAGG",22,82.05,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","D68Q D90F C102R R127S",4
"lib2","SARS-CoV-2","AGAAGGCCATAGGTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L Q84Y Y91S",3
"lib2","SARS-CoV-2","AGAAGGCCGGGCCCCC",3,115.1,10.52,-0.32,0.04,2.94,1.02,0,">1 nonsynonymous","P54R A81V",2
"lib2","SARS-CoV-2","AGAAGGCCTGGATGCC",5,23.87,7.41,-3.43,0.39,1.5,1.2,0.05,">1 nonsynonymous","Y66M A105L",2
"lib2","SARS-CoV-2","AGAAGGCGAGCCCTTG",6,129.36,6.07,-4.76,0.62,1.5,1.17,0.01,">1 nonsynonymous","K56I F126S Y178I",3
"lib2","SARS-CoV-2","AGAAGGCGATGTGCAG",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R E154R",2
"lib2","SARS-CoV-2","AGAAGGCTGAACCAAA",15,158.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38F D90S G101L N110E T201R",5
"lib2","SARS-CoV-2","AGAAGGGAAATGTTTG",6,98.49,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T55S N92F",2
"lib2","SARS-CoV-2","AGAAGGGACAGTTCAT",3,28.65,8.81,-2.03,0.17,1.81,1.08,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","AGAAGGGACGGGTTAG",6,60.14,10.82,-0.01,0.06,2.97,1.06,0,"1 nonsynonymous","S200K",1
"lib2","SARS-CoV-2","AGAAGGGATTGGATAG",2,49.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A105T V115Y P161C",3
"lib2","SARS-CoV-2","AGAAGGTAATACTGAA",4,47.46,6,-4.84,2,1.5,1.21,0.03,"1 nonsynonymous","I88E",1
"lib2","SARS-CoV-2","AGAAGGTAGACAATTT",6,16.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L G51I K128R",3
"lib2","SARS-CoV-2","AGAAGGTATACCATAG",1,15.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K48P N58L G174V S200F",4
"lib2","SARS-CoV-2","AGAAGGTCTCTCGAAT",8,61.15,8.95,-1.89,0.06,2.94,1.08,0,">1 nonsynonymous","L60Y I138A T170L",3
"lib2","SARS-CoV-2","AGAAGGTGCGGAGCCC",6,66.04,7.94,-2.9,0.14,1.73,1.07,0.01,">1 nonsynonymous","C6S S29M L57F Y66F G174M",5
"lib2","SARS-CoV-2","AGAAGTAAAAAACATT",6,106.13,10.58,-0.26,0.04,2.85,1.09,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","AGAAGTAAAAACGATA",2,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K26R F134Q S164F",4
"lib2","SARS-CoV-2","AGAAGTAAATGTAACG",11,204.44,10.82,-0.02,0.06,2.97,1.05,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","AGAAGTAAATTACATG",13,95.71,9.91,-0.93,0.09,2.19,1.03,0,">1 nonsynonymous","T15F S129P",2
"lib2","SARS-CoV-2","AGAAGTACAAGAGACT",2,154.91,9.6,-1.24,0.05,2.85,1.08,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","AGAAGTACACTCCTTA",1,16.82,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R25C G86A",2
"lib2","SARS-CoV-2","AGAAGTACACTTAAAA",4,95.59,10.91,0.07,0.06,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGTACCATAAACG",5,99.54,10.87,0.03,0.07,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAAGTACGCTGACTG",1,1.05,NA,NA,NA,NA,NA,NA,"stop","G9A E10* Y50W S113F K198I",5
"lib2","SARS-CoV-2","AGAAGTAGATTTAAAG",9,64.63,6.42,-4.42,0.42,1.5,1.13,0.02,">1 nonsynonymous","G86T S139H",2
"lib2","SARS-CoV-2","AGAAGTAGGAATTAAC",10,10.76,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","V11D V77L D98T C102D G116T P133H Q163H",7
"lib2","SARS-CoV-2","AGAAGTAGGCAACGAC",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K N40L L95M I142C",4
"lib2","SARS-CoV-2","AGAAGTATAATTGTTA",3,18.1,8.41,-2.43,0.17,1.64,1.19,0.03,">1 nonsynonymous","C6T F47S",2
"lib2","SARS-CoV-2","AGAAGTATACGACTGT",1,19.83,10.79,-0.05,0.06,2.99,1.04,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","AGAAGTATACTTAGAT",7,181.13,9.45,-1.38,0.03,2.94,1.08,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","AGAAGTATATCAAGTA",9,108.96,6.1,-4.74,0.46,1.5,1.12,0.01,">1 nonsynonymous","L5F Y123S Y159R P197S",4
"lib2","SARS-CoV-2","AGAAGTATTGACACCC",2,48.13,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I80W I88T",2
"lib2","SARS-CoV-2","AGAAGTCAAGTTCTTG",7,133.08,10.19,-0.65,0.06,2.76,1.03,0,">1 nonsynonymous","E10V R27T A33T",3
"lib2","SARS-CoV-2","AGAAGTCATAGCACAA",14,34.21,6,-4.84,1.12,1.5,1.25,0.01,">1 nonsynonymous","W106T Q144L P149M",3
"lib2","SARS-CoV-2","AGAAGTCATTTTTGGA",14,104.76,10.74,-0.1,0.03,2.98,1.03,0,">1 nonsynonymous","I2R G9F",2
"lib2","SARS-CoV-2","AGAAGTCCCAGAATGT",12,63.84,9.5,-1.34,0.08,1.9,1.09,0,"1 nonsynonymous","P96V",1
"lib2","SARS-CoV-2","AGAAGTCCTTACCAAA",2,186.69,10.4,-0.44,0.02,2.92,1.03,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","AGAAGTCGGATAGTTT",5,38.81,7.89,-2.94,0.13,2.05,1.07,0.01,">1 nonsynonymous","T15E T63H G146N V153W",4
"lib2","SARS-CoV-2","AGAAGTCGTTTTTAAG",2,37.33,10.88,0.05,0.09,2.93,1.08,0,"1 nonsynonymous","N24S",1
"lib2","SARS-CoV-2","AGAAGTCTAGGATCAA",12,4.63,NA,NA,NA,NA,NA,NA,"stop","A67H L95*",2
"lib2","SARS-CoV-2","AGAAGTCTGTGGTCAA",3,25.36,8.01,-2.83,0.38,1.5,1,0.08,"1 nonsynonymous","Y50D",1
"lib2","SARS-CoV-2","AGAAGTCTTGGATGCT",18,3.15,NA,NA,NA,NA,NA,NA,"stop","N58V A89P S129* G152C",4
"lib2","SARS-CoV-2","AGAAGTGAAAAGCCGA",5,56.44,10.8,-0.04,0.08,2.97,1.04,0,">1 nonsynonymous","G9T R27V T140A",3
"lib2","SARS-CoV-2","AGAAGTGAAACGGTAG",3,41.36,9.43,-1.41,0.16,1.71,1.19,0.01,"1 nonsynonymous","L95F",1
"lib2","SARS-CoV-2","AGAAGTGAAATGGATA",2,14.19,6.21,-4.62,0.59,1.5,1.16,0.01,">1 nonsynonymous","A14L T46P",2
"lib2","SARS-CoV-2","AGAAGTGAGCTAGACT",8,83.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A22E N107D A145P",3
"lib2","SARS-CoV-2","AGAAGTGATAAAGATA",4,85.13,8.15,-2.68,0.13,2.34,1.03,0.01,">1 nonsynonymous","Q84R A145S N171R",3
"lib2","SARS-CoV-2","AGAAGTGATCTTACTT",1,44.14,7.07,-3.76,0.17,2.02,1.06,0.01,">1 nonsynonymous","V37I Y121P T170D",3
"lib2","SARS-CoV-2","AGAAGTGATGGATCAA",4,68.6,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","T55L K94V S147Y L162W",4
"lib2","SARS-CoV-2","AGAAGTGCCGAGAATC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","R25* G174R",2
"lib2","SARS-CoV-2","AGAAGTGCTGTTAAAC",1,17.65,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","G9P V103P Y175H",3
"lib2","SARS-CoV-2","AGAAGTTCAAATATTC",5,27.34,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","L38P P161Y",2
"lib2","SARS-CoV-2","AGAAGTTCTCAAGACA",6,44.27,6,-4.84,2,3,1.22,0,">1 nonsynonymous","L5W V32L G101K N157M V182L",5
"lib2","SARS-CoV-2","AGAAGTTGTTCCATAG",4,13.94,6,-4.84,1.44,1.5,1.2,0.03,">1 nonsynonymous","D90V D98F C102F G117N",4
"lib2","SARS-CoV-2","AGAAGTTTAGAAATAA",9,140.38,10.72,-0.12,0.04,2.85,1.14,0,">1 nonsynonymous","T85N E186D T201H",3
"lib2","SARS-CoV-2","AGAAGTTTATTTTCAC",6,1.25,NA,NA,NA,NA,NA,NA,"stop","W23R Y39L D97*",3
"lib2","SARS-CoV-2","AGAAGTTTGACCAAAT",6,172.08,10.88,0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATAAAAACCAATT",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D R27L G146S N151E Y178F K199F",6
"lib2","SARS-CoV-2","AGAATAAAACTGACAA",16,253.86,10.83,-0.01,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATAAAAGAAATGA",3,93.14,10.82,-0.01,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATAAAATATTGTG",5,52.67,6.89,-3.95,0.36,1.5,1.29,0.02,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","AGAATAAAATCCAGTT",13,185.96,8.72,-2.12,0.07,2.03,1.08,0,">1 nonsynonymous","V65N G166A",2
"lib2","SARS-CoV-2","AGAATAAAATGCCATA",3,23.78,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9P C49Y G86F G172M",4
"lib2","SARS-CoV-2","AGAATAAACAACACAA",2,47.14,6.66,-4.17,0.51,1.5,1.18,0.04,">1 nonsynonymous","R25E Q144V",2
"lib2","SARS-CoV-2","AGAATAAACGTCTACA",3,40.3,9.77,-1.06,0.14,2.6,1.09,0.01,">1 nonsynonymous","T100L N120R Q144Y A192T",4
"lib2","SARS-CoV-2","AGAATAAAGCCATTGT",5,68.21,8.22,-2.62,0.19,1.5,1.04,0.01,"1 nonsynonymous","R127I",1
"lib2","SARS-CoV-2","AGAATAAATCAACATT",6,0.17,NA,NA,NA,NA,NA,NA,"stop","D34Y Y66I A81* N92Q",4
"lib2","SARS-CoV-2","AGAATAAATGGTAACA",6,47.71,9.21,-1.62,0.1,1.84,1.06,0,">1 nonsynonymous","G9W W106K Y143H",3
"lib2","SARS-CoV-2","AGAATAACAACATTCT",8,100.67,10.19,-0.64,0.04,3,1.03,0,"1 nonsynonymous","Y91W",1
"lib2","SARS-CoV-2","AGAATAACAATAACAG",7,165.83,10.78,-0.06,0.04,2.96,1.05,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","AGAATAACATAATAAA",1,15.13,10.49,-0.34,0.05,2.93,1.05,0,">1 nonsynonymous","K87R E135M",2
"lib2","SARS-CoV-2","AGAATAAGAAACGGGG",9,47.41,10.84,0,0.41,1.73,1,0.05,">1 nonsynonymous","G9L N64R L95Y E141A",4
"lib2","SARS-CoV-2","AGAATAAGAAAGCCTT",5,32.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G101V C150W",2
"lib2","SARS-CoV-2","AGAATAAGACAAAGCC",1,32.17,9.26,-1.58,0.07,2.69,1.03,0,">1 nonsynonymous","L5V T85R Y121I Q144T",4
"lib2","SARS-CoV-2","AGAATAAGAGAGAAAG",12,181.95,10.25,-0.59,0.03,2.9,1.03,0,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","AGAATAAGGCAAGTAA",11,95.91,10.71,-0.13,0.02,2.94,1.05,0,">1 nonsynonymous","A18K T100F",2
"lib2","SARS-CoV-2","AGAATAAGTCCCAAGA",4,34.23,6.23,-4.6,0.57,1.5,1.11,0.02,">1 nonsynonymous","Y39V A89R F99R L131S",4
"lib2","SARS-CoV-2","AGAATAATACGATTAT",1,24.63,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S53Y N64I F167T",3
"lib2","SARS-CoV-2","AGAATAATATAACCAC",2,29.51,6,-4.84,2,3,1.17,0,">1 nonsynonymous","R16L V52Y A67V T100M C158H",5
"lib2","SARS-CoV-2","AGAATAATCTACGATT",3,7.49,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","F44L F70R A89M F126A",4
"lib2","SARS-CoV-2","AGAATAATGAAATTAC",1,7.67,10.99,0.16,0.09,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATAATGTGAAATT",2,6.48,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R27V C49N",2
"lib2","SARS-CoV-2","AGAATACAAATCATGA",12,6.58,NA,NA,NA,NA,NA,NA,"stop","L5* P7H V173I",3
"lib2","SARS-CoV-2","AGAATACAAGTGTTAA",7,164.07,10.12,-0.72,0.02,2.94,1.04,0,">1 nonsynonymous","C61V S129V F156L",3
"lib2","SARS-CoV-2","AGAATACAATAGTGCG",1,16.3,9.45,-1.38,0.19,2.07,1.02,0.02,">1 nonsynonymous","Y39D D97Y N110G G146H",4
"lib2","SARS-CoV-2","AGAATACATCAGTAAC",1,40.23,10.55,-0.28,0.04,2.94,1.08,0,">1 nonsynonymous","T140I L187E T201M",3
"lib2","SARS-CoV-2","AGAATACCACAAGAAA",24,205.7,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K56P Y91G S113M",3
"lib2","SARS-CoV-2","AGAATACCTCAGGGTA",7,157.55,10.39,-0.45,0.02,2.88,1.07,0,">1 nonsynonymous","G83T V153N",2
"lib2","SARS-CoV-2","AGAATACGACATCTAC",3,34.95,10.77,-0.07,0.12,2.95,1,0,"1 nonsynonymous","S139A",1
"lib2","SARS-CoV-2","AGAATACGCAATCAGG",5,117.69,10.82,-0.01,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATACGGACTTGCC",5,120.81,9.6,-1.23,0.03,2.94,1.03,0,">1 nonsynonymous","I104V Y119K N130Q",3
"lib2","SARS-CoV-2","AGAATACTACAAGCAG",7,30.52,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","L60K R124C",2
"lib2","SARS-CoV-2","AGAATACTACAGCAAA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D N40V",2
"lib2","SARS-CoV-2","AGAATACTAGACTAAT",1,9.55,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N30I A42P Y91R V103I G152P S164F",6
"lib2","SARS-CoV-2","AGAATACTATACAAGG",9,128.18,10.85,0.01,0.05,2.99,1.03,0,">1 nonsynonymous","N1A E154T",2
"lib2","SARS-CoV-2","AGAATACTATCCAATT",7,85.75,10.65,-0.18,0.05,2.95,1.02,0,">1 nonsynonymous","L5Q T63I Q84S",3
"lib2","SARS-CoV-2","AGAATACTTTGGTAGT",19,184.63,6.83,-4.01,0.18,1.5,1.12,0.01,">1 nonsynonymous","T100Y L122V K128L I138M G146V N151K",6
"lib2","SARS-CoV-2","AGAATAGAAAACCTTG",7,171.66,10.42,-0.42,0.03,2.92,1.03,0,"1 nonsynonymous","Y66S",1
"lib2","SARS-CoV-2","AGAATAGAACCGAGCC",3,10.73,11.41,0.57,0.17,2.98,1,0.01,">1 nonsynonymous","G83F T201N",2
"lib2","SARS-CoV-2","AGAATAGAAGGTCGGT",3,13.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P82G Y121E",2
"lib2","SARS-CoV-2","AGAATAGAGAAAACAC",6,67.42,8.26,-2.58,0.18,2.3,1.13,0.01,">1 nonsynonymous","N1D G146I",2
"lib2","SARS-CoV-2","AGAATAGAGCTTTCCC",7,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R V32Y N40S Y121T F156R V180T H189Y",7
"lib2","SARS-CoV-2","AGAATAGATAAAGAAA",1,8.18,9.69,-1.15,0.04,2.96,1.06,0,">1 nonsynonymous","A42G G117L F160Y V173L",4
"lib2","SARS-CoV-2","AGAATAGATAAGCACG",2,39.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35S K128I N157V",3
"lib2","SARS-CoV-2","AGAATAGATTGTCATA",1,48.93,10.7,-0.14,0.05,2.94,1.08,0,">1 nonsynonymous","D98T T201W",2
"lib2","SARS-CoV-2","AGAATAGCGGCTATGA",6,65.8,9.92,-0.92,0.09,2.18,1.04,0,">1 nonsynonymous","N4L F44P V115L",3
"lib2","SARS-CoV-2","AGAATAGCGTAGTCGC",1,0.58,NA,NA,NA,NA,NA,NA,"stop","G9M T15R D34S S45* V65R T85R G101D D112H I142T E154T V173P",11
"lib2","SARS-CoV-2","AGAATAGGAAAGTAAG",3,33.46,6.89,-3.94,0.45,1.5,1.22,0.03,">1 nonsynonymous","E10F A89H",2
"lib2","SARS-CoV-2","AGAATAGGCAAGTGAC",3,11.5,9.85,-0.98,0.14,2.05,1.09,0.01,">1 nonsynonymous","G9K T15V Y91K",3
"lib2","SARS-CoV-2","AGAATAGGGAAACCGG",4,0.39,NA,NA,NA,NA,NA,NA,"stop","Y50C D59* D68E L122* Q176K",5
"lib2","SARS-CoV-2","AGAATAGTAAAAACCG",18,78.42,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I88S R127T",2
"lib2","SARS-CoV-2","AGAATAGTAAAAGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I N40T I88R",3
"lib2","SARS-CoV-2","AGAATAGTAATTGTAG",8,86.01,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N40L Y91S S139V P149S K198M",5
"lib2","SARS-CoV-2","AGAATAGTATCCGGCA",1,9.28,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y50M E154W Y165T A190V",4
"lib2","SARS-CoV-2","AGAATAGTATTCTAGA",10,2.61,NA,NA,NA,NA,NA,NA,"stop","Q84K D90V D97K P149*",4
"lib2","SARS-CoV-2","AGAATAGTGAGGAGAG",3,18.68,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G9L I28Q E76N F185Y",4
"lib2","SARS-CoV-2","AGAATAGTGGATAATC",2,1.82,NA,NA,NA,NA,NA,NA,"stop","A89E Q144*",2
"lib2","SARS-CoV-2","AGAATAGTTTAGATTT",6,56.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5G I28K A89N V115R P149F G155S",6
"lib2","SARS-CoV-2","AGAATATAACCTTGAA",5,88.35,10.82,-0.01,0.06,2.89,1.11,0,"1 nonsynonymous","V115T",1
"lib2","SARS-CoV-2","AGAATATAATAAAGAA",3,33.94,8.8,-2.04,0.07,2.94,1.13,0,">1 nonsynonymous","Y39S N120D Y143W G174D",4
"lib2","SARS-CoV-2","AGAATATAGAACATTT",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T S129V V180E",3
"lib2","SARS-CoV-2","AGAATATAGTATTCAT",3,38.74,10.83,0,0.1,2.73,1.06,0.01,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","AGAATATAGTTCTTCA",2,39.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F D112K",2
"lib2","SARS-CoV-2","AGAATATCAAGGTTGA",3,16.85,8.63,-2.2,0.17,2.79,1,0.01,">1 nonsynonymous","V37S S113L",2
"lib2","SARS-CoV-2","AGAATATCAATGAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R V103D K128M T140L",4
"lib2","SARS-CoV-2","AGAATATCATAAAGCA",2,49.29,10.69,-0.15,0.03,2.99,1.04,0,"1 nonsynonymous","E141Y",1
"lib2","SARS-CoV-2","AGAATATCTGAGCTGG",5,36.74,10.05,-0.78,0.1,2.69,1.06,0,">1 nonsynonymous","K87Y N107R",2
"lib2","SARS-CoV-2","AGAATATGAGAAAGAT",7,155.84,10.41,-0.43,0.05,2.87,1.07,0,">1 nonsynonymous","N64L H189W S200F",3
"lib2","SARS-CoV-2","AGAATATGCCCCAAAG",2,40.9,10.79,-0.05,0.06,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAATATTAATGATCC",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P D75N D112N",3
"lib2","SARS-CoV-2","AGAATATTAATGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28P D97* N120G",3
"lib2","SARS-CoV-2","AGAATATTCCTTATCT",3,25.25,9.26,-1.58,0.06,2.9,1.01,0,">1 nonsynonymous","Y35G T170H K199C",3
"lib2","SARS-CoV-2","AGAATATTGATAACAT",4,28.2,8.9,-1.93,0.13,2.87,1.17,0.01,">1 nonsynonymous","N64S Y119F G174L",3
"lib2","SARS-CoV-2","AGAATATTTACCCTTA",8,0.88,NA,NA,NA,NA,NA,NA,"stop","R25* T55L F62L G83L K94M V115F R136S G172M S184G",9
"lib2","SARS-CoV-2","AGAATCAAACCCTACG",5,46.88,10.46,-0.38,0.05,2.97,1.05,0,"1 nonsynonymous","P169Y",1
"lib2","SARS-CoV-2","AGAATCAAATACCCAA",6,65.48,6.03,-4.8,0.32,1.5,1.08,0,">1 nonsynonymous","L38D S43R G86Q T100C V115S K199V",6
"lib2","SARS-CoV-2","AGAATCAAATTTCGAA",3,100.31,9.06,-1.78,0.06,2.3,1.01,0,">1 nonsynonymous","T55A K128N Q176L T201A",4
"lib2","SARS-CoV-2","AGAATCAAGCAATAAA",7,5.2,NA,NA,NA,NA,NA,NA,"stop","R27P P82I G101H K114* L122N K128L N171I",7
"lib2","SARS-CoV-2","AGAATCAAGCAGAGTT",2,89.63,10,-0.84,0.08,2.58,1.06,0,">1 nonsynonymous","G83D F134M",2
"lib2","SARS-CoV-2","AGAATCAATTGATACG",3,24.39,10.93,0.09,0.07,2.91,1.08,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","AGAATCACAAAAAGCG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","AGAATCACAAAAGCCC",4,0.62,NA,NA,NA,NA,NA,NA,"stop","N40R T100L Y123* N151D Y165C",5
"lib2","SARS-CoV-2","AGAATCACACATAGAA",2,8.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51V A81V K128S",3
"lib2","SARS-CoV-2","AGAATCACCAACTCGG",11,99.34,9.13,-1.71,0.17,1.5,1.09,0.01,">1 nonsynonymous","T3S F12W S29V P54N V173K",5
"lib2","SARS-CoV-2","AGAATCACGACAAATC",3,31.29,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N64M Y93D G146L",3
"lib2","SARS-CoV-2","AGAATCAGACTTTGAA",4,1.87,NA,NA,NA,NA,NA,NA,"stop","V153* P169M T201M",3
"lib2","SARS-CoV-2","AGAATCAGGCACGATA",1,56.71,10.05,-0.79,0.09,2.19,1.02,0,">1 nonsynonymous","L5T E76T",2
"lib2","SARS-CoV-2","AGAATCAGTCTACACA",5,48.95,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y21R G51L L122A",3
"lib2","SARS-CoV-2","AGAATCATATCAAAGT",12,63.18,7.49,-3.35,0.2,1.5,1.09,0.01,">1 nonsynonymous","A22K N92G R136K",3
"lib2","SARS-CoV-2","AGAATCATGCTGCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","AGAATCATTATTGGCG",12,6.99,NA,NA,NA,NA,NA,NA,"stop","K87* D98* L122R",3
"lib2","SARS-CoV-2","AGAATCCAATAGATAA",2,90.39,10.82,-0.02,0.05,2.97,1.07,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","AGAATCCACAGCTTTT",10,115.19,10.88,0.04,0.06,2.83,1.17,0,"1 nonsynonymous","N1P",1
"lib2","SARS-CoV-2","AGAATCCAGTTCTACT",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K K87M",2
"lib2","SARS-CoV-2","AGAATCCCAGGTTATA",1,25.51,10.67,-0.17,0.07,2.89,1.11,0,">1 nonsynonymous","A67S L122K V173L L187Q",4
"lib2","SARS-CoV-2","AGAATCCCCGACAGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q79E K87W G172* T201R",4
"lib2","SARS-CoV-2","AGAATCCGATCCCTTC",9,87.76,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G51Y N64E F70N I88G S129R Q144L",6
"lib2","SARS-CoV-2","AGAATCCGGTATTTAA",2,9.12,10.43,-0.41,0.34,2.48,1,0.08,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","AGAATCCTAAATCAAC",1,44.29,9.01,-1.83,0.09,2.92,1.06,0,">1 nonsynonymous","P149M Q168L",2
"lib2","SARS-CoV-2","AGAATCCTGCCTAATT",6,95.26,10.81,-0.02,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATCGAAATAGAAA",7,32.45,10.94,0.1,0.24,2.6,1.04,0.02,">1 nonsynonymous","G51N T140L",2
"lib2","SARS-CoV-2","AGAATCGAACAATAAG",2,18.77,9.83,-1.01,0.1,2.86,1.02,0,">1 nonsynonymous","R73A N120L",2
"lib2","SARS-CoV-2","AGAATCGAGGTGAAAA",1,70.69,10.75,-0.09,0.04,2.92,1.1,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","AGAATCGAGTGGAGGC",5,115.25,9.23,-1.61,0.06,2.81,1.07,0,">1 nonsynonymous","V37C N109F",2
"lib2","SARS-CoV-2","AGAATCGATACTGCAC",3,1.28,NA,NA,NA,NA,NA,NA,"stop","V37D D97N L125* V181*",4
"lib2","SARS-CoV-2","AGAATCGCCTAGCGCA",1,17.23,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9W G86F Q168P",3
"lib2","SARS-CoV-2","AGAATCGTAACCCACC",2,14.96,10.22,-0.61,0.06,2.96,1,0,">1 nonsynonymous","V37L R73M T140A",3
"lib2","SARS-CoV-2","AGAATCGTGCGGTAAT",12,88,6,-4.84,1.06,2.13,1.3,0.02,">1 nonsynonymous","S19L A33P G116S",3
"lib2","SARS-CoV-2","AGAATCTAAAGTCACT",2,0.46,NA,NA,NA,NA,NA,NA,"stop","E10G F99* N157C",3
"lib2","SARS-CoV-2","AGAATCTAAATAGAGT",10,134,10.39,-0.44,0.04,2.91,1.04,0,">1 nonsynonymous","A89C L122W",2
"lib2","SARS-CoV-2","AGAATCTAACATCGCT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","K56* G83S Q144L K198S",4
"lib2","SARS-CoV-2","AGAATCTAGTTATGGC",7,54.78,10.79,-0.05,0.04,3,1.02,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","AGAATCTCACAGAAGC",12,81.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28M Y35V K48S Y66H G83V N120K Y143G",7
"lib2","SARS-CoV-2","AGAATCTCAGACGGAG",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D T15Y D98K Y121L",4
"lib2","SARS-CoV-2","AGAATCTGTGATAAAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V52* K94C F126T",3
"lib2","SARS-CoV-2","AGAATCTTGTACCGAT",3,17.46,6.32,-4.51,1.79,1.5,1.31,0.02,">1 nonsynonymous","A105P N151M N157F",3
"lib2","SARS-CoV-2","AGAATCTTTGGTATAG",2,39.21,10.88,0.04,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATGAACCGACAAT",5,56.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L95N P133S",2
"lib2","SARS-CoV-2","AGAATGAACCGATCGT",9,60.78,8.59,-2.25,0.2,1.5,1.15,0.02,">1 nonsynonymous","N4S P96I S147T",3
"lib2","SARS-CoV-2","AGAATGAATACCAAAT",5,62.16,8.55,-2.29,0.13,1.84,1.13,0.01,">1 nonsynonymous","A18Y Y121V T140E",3
"lib2","SARS-CoV-2","AGAATGACAAACGCCA",4,4.57,NA,NA,NA,NA,NA,NA,"stop","L5D G86*",2
"lib2","SARS-CoV-2","AGAATGACACCAAACA",4,41.47,10.77,-0.07,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATGACGAATAATG",2,50.27,10.24,-0.59,0.05,2.87,1.06,0,">1 nonsynonymous","D98Y N120L",2
"lib2","SARS-CoV-2","AGAATGAGAATTCTAC",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63C V103H N120F G146R",4
"lib2","SARS-CoV-2","AGAATGAGCCGTAAAC",22,228.17,6,-4.84,0.6,1.5,1.14,0,">1 nonsynonymous","V11Q V71G Y91N K128M P149L",5
"lib2","SARS-CoV-2","AGAATGATTAATGGAC",6,68.24,10.83,-0.01,0.07,2.89,1.13,0,">1 nonsynonymous","N24Q T201L",2
"lib2","SARS-CoV-2","AGAATGATTAGGATTG",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L E76F A81S",3
"lib2","SARS-CoV-2","AGAATGCAAAGCCAGT",4,79.54,9.43,-1.4,0.05,2.78,1.2,0,">1 nonsynonymous","F62A Y119T",2
"lib2","SARS-CoV-2","AGAATGCACACCGTGG",4,0.43,NA,NA,NA,NA,NA,NA,"stop","F8* S41Q N107L G166P",4
"lib2","SARS-CoV-2","AGAATGCACGTGAGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6S A105V N130* G152T T201*",5
"lib2","SARS-CoV-2","AGAATGCAGATACTGC",1,20.04,10.77,-0.06,0.06,2.95,1.08,0,"1 nonsynonymous","D90Q",1
"lib2","SARS-CoV-2","AGAATGCAGTATAATG",4,59.01,7.9,-2.94,0.21,1.5,1.08,0.01,">1 nonsynonymous","V11F D68M",2
"lib2","SARS-CoV-2","AGAATGCAGTCAGCAT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","P7V F99I W106R I142* F167E",5
"lib2","SARS-CoV-2","AGAATGCATTGAAGAA",8,0.87,NA,NA,NA,NA,NA,NA,"stop","S36Y G152*",2
"lib2","SARS-CoV-2","AGAATGCCAAAATTAG",1,5.61,6,-4.84,2,3,1.05,0,">1 nonsynonymous","F99H D137P G172L",3
"lib2","SARS-CoV-2","AGAATGCCAGGGATGT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","R16K N30A A42L A89L Y175*",5
"lib2","SARS-CoV-2","AGAATGCGACCACTAC",3,23.99,7.61,-3.22,0.17,1.87,1.11,0.01,">1 nonsynonymous","N24K C49T C61S T170E",4
"lib2","SARS-CoV-2","AGAATGCTATTCCCAG",4,83.07,8.74,-2.1,0.07,2.97,1.05,0,">1 nonsynonymous","G166I Y178C",2
"lib2","SARS-CoV-2","AGAATGCTCCGCAAAT",7,193.18,10.71,-0.12,0.04,2.93,1.06,0,">1 nonsynonymous","L5S Y123S",2
"lib2","SARS-CoV-2","AGAATGCTTCGACACG",2,18.65,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","A18T C31M N64V A89C Y121S F167D",6
"lib2","SARS-CoV-2","AGAATGCTTGATATGT",8,95.27,6.55,-4.29,0.42,1.5,1.2,0.02,">1 nonsynonymous","K56H L131H P169H",3
"lib2","SARS-CoV-2","AGAATGGAACATGTTT",1,19.51,10.84,0,0.08,2.82,1.15,0,">1 nonsynonymous","G9S T55L",2
"lib2","SARS-CoV-2","AGAATGGAGCTTCACA",4,119.12,7.02,-3.81,0.16,1.5,1.09,0.01,">1 nonsynonymous","A105V Y159I K198I",3
"lib2","SARS-CoV-2","AGAATGGATGAAGGGG",10,66.95,9.77,-1.07,0.02,2.95,1.03,0,">1 nonsynonymous","I138Y Q168M",2
"lib2","SARS-CoV-2","AGAATGGATTGTCTTT",9,59.33,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T15K S69I D112V",3
"lib2","SARS-CoV-2","AGAATGGCACTTTTTG",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N K87I I104V S164M",4
"lib2","SARS-CoV-2","AGAATGGCCTCCCGGA",6,42.7,6.09,-4.74,0.96,1.5,1.13,0.03,">1 nonsynonymous","E10M D90V C158W F167Q",4
"lib2","SARS-CoV-2","AGAATGGTAATCTTGT",9,130.1,10.37,-0.47,0.04,2.87,1.05,0,">1 nonsynonymous","N120W P149T",2
"lib2","SARS-CoV-2","AGAATGGTATATCAGA",4,0.23,NA,NA,NA,NA,NA,NA,"stop","I2S G83* G117R Y165N",4
"lib2","SARS-CoV-2","AGAATGGTCTGGAAAT",1,15.79,9.63,-1.2,0.09,1.9,1,0,">1 nonsynonymous","V37Y F44G A81V",3
"lib2","SARS-CoV-2","AGAATGGTCTTCTGAC",3,30.14,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F70G N157P",2
"lib2","SARS-CoV-2","AGAATGGTTTAGATAT",2,31.55,10.59,-0.25,0.08,2.82,1.11,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","AGAATGTAAAGTTGAA",6,4.59,NA,NA,NA,NA,NA,NA,"stop","T55K N110*",2
"lib2","SARS-CoV-2","AGAATGTAACTCACAA",2,39.95,10.68,-0.16,0.04,3,1.01,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","AGAATGTACAAACGAA",2,64.18,10.43,-0.41,0.06,2.82,1.15,0,">1 nonsynonymous","K87Y D98G E186Q",3
"lib2","SARS-CoV-2","AGAATGTAGGTTTTTC",9,51.83,8.65,-2.19,0.32,1.5,1,0.04,">1 nonsynonymous","Y91D D98H",2
"lib2","SARS-CoV-2","AGAATGTATGGATGGC",6,1.98,NA,NA,NA,NA,NA,NA,"stop","G9P L60Y T85N K94* Q144D",5
"lib2","SARS-CoV-2","AGAATGTGCATGTTAT",13,93.94,6,-4.84,1.55,1.5,1.14,0.01,">1 nonsynonymous","I88S N118S I138R",3
"lib2","SARS-CoV-2","AGAATGTTACGCAGTG",2,6.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L P82Y D90G",3
"lib2","SARS-CoV-2","AGAATGTTCAAATGGG",3,135.13,9.89,-0.94,0.09,2.37,1.06,0,">1 nonsynonymous","F17V Y35L F44D",3
"lib2","SARS-CoV-2","AGAATGTTGAAAGATG",12,190.37,10.71,-0.13,0.03,2.91,1.09,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","AGAATGTTTATAAAGT",3,63.36,10.82,-0.02,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATTAAAAAAGCAA",7,29.39,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S69V S108N",2
"lib2","SARS-CoV-2","AGAATTAAATAACAGC",4,17.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68V P82Q K132R",3
"lib2","SARS-CoV-2","AGAATTAAATTACAGG",12,62.41,10.43,-0.4,0.03,2.94,1.06,0,">1 nonsynonymous","N1Y G152R",2
"lib2","SARS-CoV-2","AGAATTAACATTCTCA",8,8.83,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","F62R P96V F160G R179L",4
"lib2","SARS-CoV-2","AGAATTAACTTATCAG",3,83.1,10.86,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAATTACCAATTACA",4,54.48,8.97,-1.87,0.08,2.83,1.11,0,">1 nonsynonymous","L5Q D59L Y143V",3
"lib2","SARS-CoV-2","AGAATTACTAAAGCAC",1,55.76,8.52,-2.31,0.38,1.5,1,0.07,">1 nonsynonymous","S43M Y178G",2
"lib2","SARS-CoV-2","AGAATTACTAACGCAT",6,254.26,9.35,-1.49,0.04,2.11,1.05,0,">1 nonsynonymous","L5Y F99L E154V",3
"lib2","SARS-CoV-2","AGAATTAGAGAATCAC",15,94.72,9.69,-1.14,0.22,1.5,1.02,0.03,"1 nonsynonymous","S19W",1
"lib2","SARS-CoV-2","AGAATTAGTGAGCTTG",1,14.38,9.26,-1.58,0.19,2.06,1.01,0.03,">1 nonsynonymous","F8Y G83K S139C F160G",4
"lib2","SARS-CoV-2","AGAATTATAAGATATG",6,61.61,10.61,-0.23,0.07,2.91,1.04,0,">1 nonsynonymous","F44W T85A",2
"lib2","SARS-CoV-2","AGAATTATAGATCAAT",3,16.4,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N4S N107Q V115L P149L Q168P",5
"lib2","SARS-CoV-2","AGAATTATGCCAAGAA",6,46.16,7.65,-3.19,0.13,1.5,1.11,0,">1 nonsynonymous","Q79R L131F",2
"lib2","SARS-CoV-2","AGAATTATTAACAACA",2,26.12,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","N120I F167S",2
"lib2","SARS-CoV-2","AGAATTATTATTCTGT",14,214.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46D A81R G86I G116D",4
"lib2","SARS-CoV-2","AGAATTCAAATATCTA",3,36.63,9.45,-1.39,0.08,2.36,1.02,0,">1 nonsynonymous","Q84C T100S G116Y",3
"lib2","SARS-CoV-2","AGAATTCAACGGCTTA",6,56.1,8.35,-2.49,0.14,2.44,1.11,0.01,">1 nonsynonymous","G83S Y175C",2
"lib2","SARS-CoV-2","AGAATTCAATACCACA",1,10.51,10.6,-0.24,0.12,2.82,1.14,0,">1 nonsynonymous","Y39K P149G",2
"lib2","SARS-CoV-2","AGAATTCAGGTAATCG",8,75.56,10.59,-0.24,0.04,2.83,1.13,0,">1 nonsynonymous","T55H F156P",2
"lib2","SARS-CoV-2","AGAATTCATTACTTGT",5,7.25,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","W23L Q168L",2
"lib2","SARS-CoV-2","AGAATTCTCGTTTTTA",1,8.77,9.16,-1.68,0.1,2.73,1.34,0.01,">1 nonsynonymous","S43T G51H Y119P",3
"lib2","SARS-CoV-2","AGAATTCTGAGTACAG",3,150.57,10.38,-0.46,0.03,2.87,1.06,0,">1 nonsynonymous","D34E K128A",2
"lib2","SARS-CoV-2","AGAATTCTGATGATAG",8,81.22,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","L57V D98T T148P N171R S184Y T201M",6
"lib2","SARS-CoV-2","AGAATTGAAACCATGC",4,86.73,10.47,-0.36,0.04,2.87,1.13,0,">1 nonsynonymous","T3E K128Y C195M",3
"lib2","SARS-CoV-2","AGAATTGAATATCACG",6,137.84,10.48,-0.35,0.03,2.93,1.06,0,">1 nonsynonymous","T15L N24S D98S L125M",4
"lib2","SARS-CoV-2","AGAATTGACGAAGAAC",7,47.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R27M V37N Y91L I104R Y119L R136I",6
"lib2","SARS-CoV-2","AGAATTGAGAAACAAA",1,54.54,8.67,-2.17,0.1,2.36,1.05,0,">1 nonsynonymous","I2C Y66A Q168T",3
"lib2","SARS-CoV-2","AGAATTGATTGGATTA",3,2.12,NA,NA,NA,NA,NA,NA,"stop","P96S Y165*",2
"lib2","SARS-CoV-2","AGAATTGCACTGGATG",2,42.5,10.71,-0.13,0.07,2.9,1.13,0,"1 nonsynonymous","Q84V",1
"lib2","SARS-CoV-2","AGAATTGGAGTAAGGT",1,76.76,8.93,-1.9,0.06,3,1.03,0,">1 nonsynonymous","N40D Y119W Q144S",3
"lib2","SARS-CoV-2","AGAATTGGATATTAAT",10,112.18,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V20M Y39P N130I N151L",4
"lib2","SARS-CoV-2","AGAATTGGCATGTAAA",5,12.56,6.07,-4.77,0.4,3,1.03,0,">1 nonsynonymous","S36H G83D S139I G146S",4
"lib2","SARS-CoV-2","AGAATTGTAGTTATCA",2,33.08,10.91,0.08,0.14,2.6,1.08,0.01,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","AGAATTGTCCAAATCT",1,9.46,8.99,-1.84,0.38,1.5,1.05,0.06,">1 nonsynonymous","A105N P149M",2
"lib2","SARS-CoV-2","AGAATTGTGAAAAAAA",1,74.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5A L60P Y66T G74L G83D L122T",6
"lib2","SARS-CoV-2","AGAATTGTTGGGCAAA",10,12.46,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","L183E",1
"lib2","SARS-CoV-2","AGAATTTAAGACCGAC",20,131.28,8,-2.84,0.2,1.5,1.15,0.01,">1 nonsynonymous","F8S K114E N120C",3
"lib2","SARS-CoV-2","AGAATTTAAGGAGAAT",4,29.11,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","G9K V20N P96F A105F",4
"lib2","SARS-CoV-2","AGAATTTAATATTTTG",1,14.63,10.19,-0.64,0.06,3,1,0,">1 nonsynonymous","L125M Y165H",2
"lib2","SARS-CoV-2","AGAATTTGCCTACACA",1,0,NA,NA,NA,NA,NA,NA,"stop","I88M A105* A192T",3
"lib2","SARS-CoV-2","AGAATTTTCAAACACT",2,11.03,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C61S T148N P161D G172S",4
"lib2","SARS-CoV-2","AGACAAAAAAGAGGTA",3,42.48,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","AGACAAAAATACTAAT",7,64.47,6,-4.84,1.46,1.5,1.11,0,"1 nonsynonymous","F167T",1
"lib2","SARS-CoV-2","AGACAAAACCAGACTG",2,18.68,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","P82Q S184R",2
"lib2","SARS-CoV-2","AGACAAAACGCTATAA",4,31.54,9.06,-1.77,0.21,1.56,1.13,0.03,">1 nonsynonymous","E10A P82L",2
"lib2","SARS-CoV-2","AGACAAAAGAACACAA",2,38.95,8.43,-2.41,0.09,2.83,1.01,0.01,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","AGACAAAAGCCCGATA",18,117.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E Y119A T201K",3
"lib2","SARS-CoV-2","AGACAAAATAAACTAC",16,9.14,NA,NA,NA,NA,NA,NA,"stop","C31P V37* S41* D59V S113T G172W",6
"lib2","SARS-CoV-2","AGACAAAATAACCCGG",10,113.98,9.71,-1.12,0.14,1.7,1.04,0.01,">1 nonsynonymous","G51I Y66L I138T",3
"lib2","SARS-CoV-2","AGACAAAATCCCATCG",8,179.7,9.97,-0.86,0.06,2.43,1.03,0,">1 nonsynonymous","G9S S45Y D90F K198N",4
"lib2","SARS-CoV-2","AGACAAAATCTAGAAT",3,8.13,11,0.16,0.09,2.9,1.09,0,"1 nonsynonymous","I2P",1
"lib2","SARS-CoV-2","AGACAAACACAAATTG",2,46.46,9.8,-1.03,0.08,2.39,1.04,0,">1 nonsynonymous","A22L V37D S45T D97I",4
"lib2","SARS-CoV-2","AGACAAACGCGAGCCT",3,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V C61E K87I D98E P197T",5
"lib2","SARS-CoV-2","AGACAAACTAACTGCA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V37S N64C E141Q N157I",5
"lib2","SARS-CoV-2","AGACAAACTTTTATGG",2,7.42,10.93,0.09,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACAAAGAAAAACGG",1,36.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V32K T55M D137R T201L",4
"lib2","SARS-CoV-2","AGACAAAGAGCAATGT",8,17.58,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C49A A89M K114M",3
"lib2","SARS-CoV-2","AGACAAAGATCTACCT",3,65.46,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","C6T V103A",2
"lib2","SARS-CoV-2","AGACAAAGTGAAGATC",3,54.67,7.45,-3.39,0.38,1.5,1.06,0.06,">1 nonsynonymous","N107R L131A",2
"lib2","SARS-CoV-2","AGACAAATGGAAAAAT",10,2.2,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","AGACAAATGGACAGCG",2,8.83,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D34V P96F N110Y",3
"lib2","SARS-CoV-2","AGACAACAACATCGCG",2,18.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7S F12N F44N D98L V153R",5
"lib2","SARS-CoV-2","AGACAACAACGCAATT",2,28.07,9.28,-1.55,0.14,2.24,1.22,0.01,">1 nonsynonymous","S41N T85M L125S R136G E154T",5
"lib2","SARS-CoV-2","AGACAACACACTTCTA",7,2.62,NA,NA,NA,NA,NA,NA,"stop","A14G V32* N118I",3
"lib2","SARS-CoV-2","AGACAACGACAAATAA",8,403.58,9.17,-1.67,0.05,2.58,1.06,0,">1 nonsynonymous","T3V C61I K114G P149L",4
"lib2","SARS-CoV-2","AGACAACTATAAAAAA",2,69.34,10.84,0,0.07,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACAACTATAAACCC",3,0.18,NA,NA,NA,NA,NA,NA,"stop","C6D N24I K87* K114P",4
"lib2","SARS-CoV-2","AGACAACTATACTCAG",3,11.37,11.05,0.21,0.09,2.97,1.03,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","AGACAACTTTCAACAG",1,3.67,NA,NA,NA,NA,NA,NA,"stop","V37* N107P C158D",3
"lib2","SARS-CoV-2","AGACAAGAGAATTGAT",3,81.26,8.5,-2.33,0.1,3,1.04,0,">1 nonsynonymous","L122K Y175L",2
"lib2","SARS-CoV-2","AGACAAGATACACATA",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H T140E",2
"lib2","SARS-CoV-2","AGACAAGCAGCCTGAG",5,81.91,9.05,-1.79,0.06,2.59,1.07,0,">1 nonsynonymous","K87D Y91N K114S",3
"lib2","SARS-CoV-2","AGACAAGCTTATATAA",6,0.08,NA,NA,NA,NA,NA,NA,"stop","A14Y T85S K198*",3
"lib2","SARS-CoV-2","AGACAAGGCTTGCCTT",2,13.35,8.13,-2.7,0.29,2.03,1.08,0.03,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","AGACAAGGGGAAGGAC",2,15.59,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","S19E C102L",2
"lib2","SARS-CoV-2","AGACAAGGGTACGGGC",6,199.55,10.23,-0.61,0.05,2.78,1,0,">1 nonsynonymous","F12L W106F",2
"lib2","SARS-CoV-2","AGACAAGTTCAAAAAG",11,84.2,9.62,-1.22,0.1,1.9,1.08,0,">1 nonsynonymous","N1L V32S L60I F134T",4
"lib2","SARS-CoV-2","AGACAATACCTAGAAA",3,2.42,NA,NA,NA,NA,NA,NA,"stop","A14W S43* W106V P149L F167V",5
"lib2","SARS-CoV-2","AGACAATATATAGAAA",10,67.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119I Y165L G196W",3
"lib2","SARS-CoV-2","AGACAATATGAAACGT",1,14.7,10.82,-0.02,0.08,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACAATCAATATCAC",9,0.74,NA,NA,NA,NA,NA,NA,"stop","V77L F99* S113K Y121H N157R L188S",6
"lib2","SARS-CoV-2","AGACAATGAAAAAAGC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","L5* C49M T55G G86S D98S F160S",6
"lib2","SARS-CoV-2","AGACAATGAGTATCAC",4,82.03,10.32,-0.51,0.08,2.79,1.12,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","AGACAATGGCAAGAAA",10,101.21,10.83,-0.01,0.05,2.97,1.06,0,">1 nonsynonymous","F44W F160H",2
"lib2","SARS-CoV-2","AGACAATTAACATTCG",1,22.94,10.79,-0.04,0.06,2.87,1.14,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","AGACAATTGAATTAGA",8,88.97,8.27,-2.56,0.11,1.55,1.08,0.01,">1 nonsynonymous","L5V W106G G174K",3
"lib2","SARS-CoV-2","AGACAATTTATCAGAC",10,130.36,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9V G51T G83I I138N",4
"lib2","SARS-CoV-2","AGACACAAAGTAAAGT",3,67.97,10.87,0.03,0.07,2.92,1.07,0,">1 nonsynonymous","V37L Y91F",2
"lib2","SARS-CoV-2","AGACACAAATGCTTGC",7,104.59,10.82,-0.02,0.06,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACACAAGCATGAAA",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V G86N",2
"lib2","SARS-CoV-2","AGACACACAATCAATA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","Y35V K56D Y143* V173N",4
"lib2","SARS-CoV-2","AGACACACACACAATC",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V S113V L122A Q163S S184H",5
"lib2","SARS-CoV-2","AGACACACGCTACCGA",3,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81M R124M",2
"lib2","SARS-CoV-2","AGACACAGAACAGTCA",13,55.73,6,-4.84,1.9,1.5,1.12,0.01,">1 nonsynonymous","C6R R27A I80W I88G G117F I138N",6
"lib2","SARS-CoV-2","AGACACAGCGGCAGTT",9,146.1,10.61,-0.22,0.02,2.95,1.06,0,">1 nonsynonymous","S45H V115T",2
"lib2","SARS-CoV-2","AGACACAGGCTCCCAC",10,188.94,9.25,-1.59,0.04,2.81,1.14,0,">1 nonsynonymous","F156N G174S",2
"lib2","SARS-CoV-2","AGACACATACGATTAT",8,43.64,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T3M V37M L95W P161S Y165A T201Y",6
"lib2","SARS-CoV-2","AGACACATACTTGAAT",7,42.12,9.18,-1.65,0.14,1.7,1.1,0.01,">1 nonsynonymous","P7A F62T D97E V181M A190V",5
"lib2","SARS-CoV-2","AGACACATATAAACAC",15,143.07,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V37P G51M A105M",3
"lib2","SARS-CoV-2","AGACACATGATTTAAC",10,163.86,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V37S A67H N120G P177G",4
"lib2","SARS-CoV-2","AGACACATTTGATTGA",1,21.91,10.46,-0.37,0.06,2.98,1.06,0,"1 nonsynonymous","V115Y",1
"lib2","SARS-CoV-2","AGACACCAGGGTCCAA",4,125.96,10.86,0.03,0.04,2.86,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACACCATCAGGGGC",16,4.93,NA,NA,NA,NA,NA,NA,"stop","G166* S200*",2
"lib2","SARS-CoV-2","AGACACCGAACACAGG",5,82.44,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S113D G146M",2
"lib2","SARS-CoV-2","AGACACCTCAACATAT",3,45.22,10.79,-0.05,0.06,2.96,1.05,0,">1 nonsynonymous","R27E I138V G152D",3
"lib2","SARS-CoV-2","AGACACCTGGAATCAT",5,1.44,NA,NA,NA,NA,NA,NA,"stop","N130*",1
"lib2","SARS-CoV-2","AGACACGAAGGACAGA",6,130.73,8.39,-2.45,0.12,2.09,1.04,0.01,"1 nonsynonymous","N157V",1
"lib2","SARS-CoV-2","AGACACGAATGCATTC",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95N E135M G196W",3
"lib2","SARS-CoV-2","AGACACGAGATAACCA",4,61.64,10.8,-0.04,0.06,2.99,1.05,0,">1 nonsynonymous","D98V N130K",2
"lib2","SARS-CoV-2","AGACACGATAACTCAA",1,39.09,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","K56P S113R G152M Y178N",4
"lib2","SARS-CoV-2","AGACACGCACATGCTG",1,102.03,10.7,-0.13,0.04,2.96,1.03,0,">1 nonsynonymous","T63A G83S V173K",3
"lib2","SARS-CoV-2","AGACACGCTTCTTTGA",11,145.8,10.81,-0.03,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACACGGATTCGAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","P7R R27* Y66S T100S N109P",5
"lib2","SARS-CoV-2","AGACACGGCAAATTGT",9,59.34,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C61Y D98I S113P G146P",4
"lib2","SARS-CoV-2","AGACACGTACAAAGTA",5,118.43,10.46,-0.37,0.07,2.87,1.09,0,"1 nonsynonymous","F134C",1
"lib2","SARS-CoV-2","AGACACTAAAGTAGGT",1,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8D N64F S129Y",3
"lib2","SARS-CoV-2","AGACACTAAATTCTTT",7,134.95,9.75,-1.08,0.03,2.89,1.1,0,">1 nonsynonymous","Y119K P149S",2
"lib2","SARS-CoV-2","AGACACTACGACCGTT",1,33.23,10.72,-0.12,0.08,2.92,1.12,0,"1 nonsynonymous","S36A",1
"lib2","SARS-CoV-2","AGACACTATCCAGAAA",10,119.66,10.97,0.14,0.06,2.89,1.12,0,"1 nonsynonymous","E154R",1
"lib2","SARS-CoV-2","AGACACTATTCGCGAC",7,53.76,10.8,-0.03,0.04,2.94,1.07,0,">1 nonsynonymous","N1T Y66F",2
"lib2","SARS-CoV-2","AGACACTCAGATTCTT",3,806.2,10.79,-0.05,0.03,2.97,1.05,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","AGACACTCTGAACAAC",5,50.63,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N40F L95N",2
"lib2","SARS-CoV-2","AGACACTGACCAGTCT",3,49.71,6.49,-4.34,0.39,1.5,1.08,0.02,">1 nonsynonymous","Y21E D34H V37I T55F",4
"lib2","SARS-CoV-2","AGACACTGCGCATTTA",3,77.76,8.78,-2.06,0.07,2.74,1.06,0,">1 nonsynonymous","C6A T170K",2
"lib2","SARS-CoV-2","AGACACTGGACTCTTG",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M S41E K56L I80L K94E",5
"lib2","SARS-CoV-2","AGACACTGTGAGATGT",3,91.8,10.8,-0.03,0.04,2.96,1.07,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","AGACACTTACATTCTT",2,65.82,10.89,0.05,0.06,2.94,1.09,0,"1 nonsynonymous","I104F",1
"lib2","SARS-CoV-2","AGACACTTATAGTCTG",2,0.52,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AGACAGAAAATCATTA",12,77.56,10.72,-0.12,0.04,2.89,1.11,0,">1 nonsynonymous","Q84K L95V",2
"lib2","SARS-CoV-2","AGACAGAATCACAAAA",3,125.63,9.82,-1.01,0.06,2.48,1.03,0,">1 nonsynonymous","A33K K56Y",2
"lib2","SARS-CoV-2","AGACAGAATTCGATCG",2,17.45,6.34,-4.5,0.89,1.5,1.19,0.04,">1 nonsynonymous","K94D I104W",2
"lib2","SARS-CoV-2","AGACAGACACATTCTA",10,0.5,NA,NA,NA,NA,NA,NA,"stop","A14F A33H Q79* P149L",4
"lib2","SARS-CoV-2","AGACAGACAGAATACC",4,56.24,9.06,-1.78,0.32,1.5,1,0.04,">1 nonsynonymous","E76T D98V T140S G155E",4
"lib2","SARS-CoV-2","AGACAGAGAAAGCATT",21,5.7,NA,NA,NA,NA,NA,NA,"stop","V11F P133*",2
"lib2","SARS-CoV-2","AGACAGAGTTCAAAGA",6,119.38,10.85,0.02,0.05,2.87,1.1,0,">1 nonsynonymous","L5P S43A",2
"lib2","SARS-CoV-2","AGACAGATAAAAATCT",1,35.49,9.86,-0.97,0.09,2.09,1.07,0,">1 nonsynonymous","V37T G51T A105S F160P",4
"lib2","SARS-CoV-2","AGACAGATATATTTGA",7,34.41,9.25,-1.59,0.13,1.83,1.09,0.01,">1 nonsynonymous","L57S D98F",2
"lib2","SARS-CoV-2","AGACAGATCCCAATTG",9,199.1,9.76,-1.08,0.03,2.79,1.03,0,">1 nonsynonymous","D34C K132L G155S",3
"lib2","SARS-CoV-2","AGACAGATCGATAACC",4,55.31,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G86Q S108Y",2
"lib2","SARS-CoV-2","AGACAGCAATTCTGCA",2,25.69,10.7,-0.14,0.05,2.88,1.14,0,"1 nonsynonymous","L111H",1
"lib2","SARS-CoV-2","AGACAGCCCGACCCTA",17,93.8,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S69V G101N Q144A T201G",4
"lib2","SARS-CoV-2","AGACAGCCGAAACTTT",7,38.45,6.6,-4.23,0.25,1.84,1.09,0.01,">1 nonsynonymous","A42L N107Q S139C F156Q",4
"lib2","SARS-CoV-2","AGACAGCTAGGAGGTG",4,41.57,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V20R I80W N110K Y143I F156L F167T",6
"lib2","SARS-CoV-2","AGACAGGAAAAAAATC",3,11.33,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","Y66M D137V Y165S",3
"lib2","SARS-CoV-2","AGACAGGAGTCGAAAA",4,40.32,9.39,-1.44,0.14,1.59,1.04,0.01,">1 nonsynonymous","D59L W106R",2
"lib2","SARS-CoV-2","AGACAGGCAGTAGTAA",2,48.3,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T55G D68V N118I",3
"lib2","SARS-CoV-2","AGACAGGCATGTAAGT",1,25.53,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S69R C102L G166K T201C",4
"lib2","SARS-CoV-2","AGACAGGGTGCGGCTA",10,88.84,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S43M D59V S69I S129L",4
"lib2","SARS-CoV-2","AGACAGGTCCATCCAA",9,134.56,8.53,-2.3,0.27,1.5,1,0.03,">1 nonsynonymous","S41W D97M L122R P133H Y178A",5
"lib2","SARS-CoV-2","AGACAGTAATGAACAA",3,10.82,9.81,-1.03,0.17,2.47,1.25,0.01,">1 nonsynonymous","R25T P54R D98H",3
"lib2","SARS-CoV-2","AGACAGTACTGATTGC",3,23.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F44S K56S A89N D98V K199F",5
"lib2","SARS-CoV-2","AGACAGTACTTAACCA",4,34.51,10.62,-0.21,0.07,2.98,1,0,">1 nonsynonymous","L60D K199G",2
"lib2","SARS-CoV-2","AGACAGTATAAAGACT",2,28.58,10.11,-0.72,0.08,2.68,1.05,0,">1 nonsynonymous","V11I E135W",2
"lib2","SARS-CoV-2","AGACATAAAAATGTAT",1,10.05,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F99L Y165P",2
"lib2","SARS-CoV-2","AGACATAAAATAGAGC",2,36.36,10.75,-0.09,0.06,2.89,1.11,0,"1 nonsynonymous","K114N",1
"lib2","SARS-CoV-2","AGACATAAACACTAAT",6,22.92,6.25,-4.58,1.15,1.5,1.25,0.06,">1 nonsynonymous","F70R F99S T148A V173A",4
"lib2","SARS-CoV-2","AGACATAAATTACAAC",1,4.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70L",1
"lib2","SARS-CoV-2","AGACATAAGCATAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* Q176C",2
"lib2","SARS-CoV-2","AGACATAATATTACCT",3,61.91,10.73,-0.1,0.03,2.91,1.1,0,"1 nonsynonymous","T46I",1
"lib2","SARS-CoV-2","AGACATACAAAACAGC",2,0,NA,NA,NA,NA,NA,NA,"stop","L38R K87* P149L L187I",4
"lib2","SARS-CoV-2","AGACATACAAGGGCAG",3,4.57,NA,NA,NA,NA,NA,NA,"stop","N24M Y35* G116V",3
"lib2","SARS-CoV-2","AGACATACATCATGAA",2,0.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","AGACATACTAGAAATC",6,78.5,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K87L C158F",2
"lib2","SARS-CoV-2","AGACATAGAAGCGAAA",7,69.33,10.76,-0.08,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACATAGAGCTTTGA",15,208.64,9.9,-0.94,0.03,2.8,1.04,0,">1 nonsynonymous","C6W L187A",2
"lib2","SARS-CoV-2","AGACATAGGATCATTA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22F F44D T140S",3
"lib2","SARS-CoV-2","AGACATAGTCAAACAA",2,0.46,NA,NA,NA,NA,NA,NA,"stop","G9D F156* T201F",3
"lib2","SARS-CoV-2","AGACATAGTCAAGGCG",6,206.87,10.65,-0.19,0.02,2.95,1.06,0,">1 nonsynonymous","K114C T148L",2
"lib2","SARS-CoV-2","AGACATAGTCGATAAA",1,9.22,10.85,0.01,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACATATAACGTTAA",5,1.2,NA,NA,NA,NA,NA,NA,"stop","N4* F8S T201L",3
"lib2","SARS-CoV-2","AGACATATCCTTGGAC",10,69.19,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","E10T T15E Y35K L60E F167W",5
"lib2","SARS-CoV-2","AGACATATGGCTCTCC",5,7.26,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N64C V77N D98T",3
"lib2","SARS-CoV-2","AGACATATGTACTACG",1,6.78,6,-4.84,2,3,1.01,0,">1 nonsynonymous","C6V T55E F70L K94Y T140D T148N Y159F V180N",8
"lib2","SARS-CoV-2","AGACATATTATTTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102D G152F P197W",3
"lib2","SARS-CoV-2","AGACATCAAAGCAAAC",7,0.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R R124C V180M",3
"lib2","SARS-CoV-2","AGACATCAAATGTTTT",4,39.05,10.08,-0.75,0.08,2.81,1.15,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","AGACATCAACGTCCCA",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S G101W N107S",3
"lib2","SARS-CoV-2","AGACATCAATTAAAGA",1,11.3,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T55V A81L F167P",3
"lib2","SARS-CoV-2","AGACATCACCGATAAA",1,15.18,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","E10H G86P N110F",3
"lib2","SARS-CoV-2","AGACATCATATGGGGG",4,53.33,10.39,-0.44,0.04,2.89,1.1,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","AGACATCCAAAACTAT",4,58.12,10.79,-0.05,0.05,2.9,1.11,0,"1 nonsynonymous","A190S",1
"lib2","SARS-CoV-2","AGACATCCAAGATCAT",2,60.98,10.7,-0.14,0.03,2.95,1.02,0,">1 nonsynonymous","L122V Q144R",2
"lib2","SARS-CoV-2","AGACATCCATACACCG",2,65.12,9.4,-1.44,0.06,1.87,1.09,0,">1 nonsynonymous","L38C D98S",2
"lib2","SARS-CoV-2","AGACATCGCCGAATGA",5,70.7,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N40L I142L Y175G V180Y",4
"lib2","SARS-CoV-2","AGACATCGTCCACTCA",2,25.23,8.88,-1.95,0.09,1.84,1.04,0,">1 nonsynonymous","A42L T85L G155F",3
"lib2","SARS-CoV-2","AGACATCTGATGTTCA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K D137V S164D T201L",4
"lib2","SARS-CoV-2","AGACATGAATCCCATT",3,27.93,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N24C V71E A105S N157M",4
"lib2","SARS-CoV-2","AGACATGACAATAAAC",11,224.25,10.45,-0.38,0.04,2.9,1.08,0,">1 nonsynonymous","S45M K87Y",2
"lib2","SARS-CoV-2","AGACATGATCTCGGCT",2,17.62,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28R A42S A105R",3
"lib2","SARS-CoV-2","AGACATGCAAACGTGA",8,1.72,NA,NA,NA,NA,NA,NA,"stop","L5P R73F S113*",3
"lib2","SARS-CoV-2","AGACATGCAGATCATG",1,11.08,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","G83P G146T",2
"lib2","SARS-CoV-2","AGACATGCCAGTAAAA",4,50.25,10.9,0.06,0.05,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACATGTGAATTCAC",9,130.21,9.94,-0.89,0.05,2.14,1.05,0,"1 nonsynonymous","E76K",1
"lib2","SARS-CoV-2","AGACATGTGGTGTAAT",4,72.92,10.31,-0.53,0.06,2.89,1.03,0,">1 nonsynonymous","P133K K198N",2
"lib2","SARS-CoV-2","AGACATTAATATATAT",4,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D34S F62S D75T",4
"lib2","SARS-CoV-2","AGACATTACAACATTA",10,0.15,NA,NA,NA,NA,NA,NA,"stop","S41* Y119* N157R",3
"lib2","SARS-CoV-2","AGACATTACATAAACA",9,34.35,6.13,-4.71,0.8,1.5,1.17,0.01,">1 nonsynonymous","V37G V77L P82L G166C",4
"lib2","SARS-CoV-2","AGACATTATGAACTAA",1,21.29,10.91,0.07,0.07,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACATTCATGACAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S45* G51K G86I F134T P161S",5
"lib2","SARS-CoV-2","AGACATTCTGCAGTGG",6,34.29,9.79,-1.05,0.16,2.51,1.04,0.01,">1 nonsynonymous","N40L T46Y T55P C61N D97F G196W",6
"lib2","SARS-CoV-2","AGACATTCTTCAAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A S139Y P149S P161V",4
"lib2","SARS-CoV-2","AGACATTGCAGCAAAC",2,37.3,10.81,-0.02,0.05,3,1.03,0,">1 nonsynonymous","Y35F C61E T100M",3
"lib2","SARS-CoV-2","AGACATTGCCAAATAC",5,82.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2G Y93K T100S",3
"lib2","SARS-CoV-2","AGACATTGCGTATCAC",1,15.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9Y F99H D137C Y143R G174L",5
"lib2","SARS-CoV-2","AGACATTGTATCAAAA",7,118.32,9.25,-1.59,0.06,1.92,1.06,0,">1 nonsynonymous","P7N C31Q N107G",3
"lib2","SARS-CoV-2","AGACATTTTCCATAAT",5,234.73,10.82,-0.01,0.05,2.93,1.09,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","AGACCAAAAACTTTTC",5,18.93,8.37,-2.46,0.29,1.52,1.29,0.03,">1 nonsynonymous","A105I Y119F S129I K198R",4
"lib2","SARS-CoV-2","AGACCAAAATTCAACG",4,0.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158P",1
"lib2","SARS-CoV-2","AGACCAAACGCAATTA",3,43.71,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R16V T46C N64K N92F R179V",5
"lib2","SARS-CoV-2","AGACCAAAGAAACAAC",12,269.24,8.36,-2.47,0.11,2.45,1.05,0,">1 nonsynonymous","Y35S T46F Y119E",3
"lib2","SARS-CoV-2","AGACCAAAGAACTGGC",1,27.54,10.02,-0.82,0.11,2.33,1,0.01,">1 nonsynonymous","A42V D90E P96G",3
"lib2","SARS-CoV-2","AGACCAACAATTTCAT",10,185.72,9.85,-0.99,0.07,2.36,1.06,0,"1 nonsynonymous","F8C",1
"lib2","SARS-CoV-2","AGACCAACATAACAAG",8,85.77,8.29,-2.55,0.12,2.48,1.07,0.01,">1 nonsynonymous","G9S T100A S113N",3
"lib2","SARS-CoV-2","AGACCAAGAGTTCTTT",5,59.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12K A42G N64L G146P",4
"lib2","SARS-CoV-2","AGACCAAGCTGCATCA",9,69.94,10.77,-0.07,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCAATAACCGGAC",3,42.65,9.65,-1.19,0.04,2.98,1.03,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","AGACCAATACCTATGA",3,37.31,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A42G N107C F167T",3
"lib2","SARS-CoV-2","AGACCAATTCATGAAT",5,147.18,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A105H P177T",2
"lib2","SARS-CoV-2","AGACCACAAGGATAAT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","N40G T63W Q84* Y123I K132W T140D",6
"lib2","SARS-CoV-2","AGACCACAATTGGTAC",2,52.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60Q C150M N157C",3
"lib2","SARS-CoV-2","AGACCACAGAATTCCC",15,5.44,NA,NA,NA,NA,NA,NA,"stop","A18* K26L D34W L122M K128D V180N",6
"lib2","SARS-CoV-2","AGACCACAGGTCCTCA",5,120.4,8.4,-2.44,0.15,2.16,1.07,0.01,">1 nonsynonymous","N118I F160L",2
"lib2","SARS-CoV-2","AGACCACCTATCATTA",9,145.82,10.74,-0.1,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCACGACGGTCAG",3,196.37,10.85,0.02,0.05,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCACGCAAGTCCC",2,22.13,10.49,-0.35,0.09,2.84,1.11,0,"1 nonsynonymous","D34E",1
"lib2","SARS-CoV-2","AGACCACGCTACGGCA",1,73.46,10.92,0.08,0.05,2.95,1.06,0,">1 nonsynonymous","R16S N130S",2
"lib2","SARS-CoV-2","AGACCACGGAAACAAA",6,3.35,NA,NA,NA,NA,NA,NA,"stop","I2S A18P Y50* L60C G86M E154N G166D",7
"lib2","SARS-CoV-2","AGACCACGTACAAAAT",1,69.62,8.58,-2.26,0.13,1.73,1.12,0.01,">1 nonsynonymous","C6G Y39E S139L",3
"lib2","SARS-CoV-2","AGACCAGAAGGATCGG",11,315.55,10.45,-0.38,0.03,2.93,1.04,0,">1 nonsynonymous","T15R F62I T100Y",3
"lib2","SARS-CoV-2","AGACCAGAAGTTTGCA",5,58.23,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","F99L K128L C158Y",3
"lib2","SARS-CoV-2","AGACCAGAGACATAAA",3,17.35,6.84,-4,0.5,1.5,1.22,0.03,">1 nonsynonymous","V77Y K87S K199E",3
"lib2","SARS-CoV-2","AGACCAGATACAACCT",6,154.83,10.35,-0.49,0.04,2.84,1.06,0,">1 nonsynonymous","V32E E135A",2
"lib2","SARS-CoV-2","AGACCAGATTCGTTAT",1,34.11,6.63,-4.21,0.26,1.75,1.14,0.01,">1 nonsynonymous","N118V A145P S184C",3
"lib2","SARS-CoV-2","AGACCAGCCACCAACA",9,50.47,7.74,-3.1,0.35,1.5,1,0.04,">1 nonsynonymous","S108R P149M",2
"lib2","SARS-CoV-2","AGACCAGTATACCGTG",6,42.25,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2S Y66M P82N P96R",4
"lib2","SARS-CoV-2","AGACCAGTTAAGCAAT",7,281.84,9.32,-1.52,0.03,2.73,1.09,0,">1 nonsynonymous","G9E S36Y T170Y",3
"lib2","SARS-CoV-2","AGACCATAACCGATTG",5,0.59,NA,NA,NA,NA,NA,NA,"stop","N58L F167Y T201*",3
"lib2","SARS-CoV-2","AGACCATAACGCAACA",1,6.45,7.88,-2.96,0.3,2.07,1.04,0.04,">1 nonsynonymous","T15K S139P",2
"lib2","SARS-CoV-2","AGACCATAATCATTCT",10,94.36,9.97,-0.86,0.1,2.16,1.07,0,">1 nonsynonymous","T3Y N13L",2
"lib2","SARS-CoV-2","AGACCATACACTAAAG",1,11.55,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L60T R73G Y93G",3
"lib2","SARS-CoV-2","AGACCATAGCACACGT",5,51.12,8.58,-2.26,0.19,1.5,1.15,0.02,">1 nonsynonymous","T85K Q144L S184E",3
"lib2","SARS-CoV-2","AGACCATCAAATCCGT",2,7,10.05,-0.78,0.26,2.6,1,0.02,">1 nonsynonymous","F44V K132W",2
"lib2","SARS-CoV-2","AGACCATCCCCTAACT",2,83.94,10.85,0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCATGAACCCAGC",1,9.71,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29L E141K T170I F185D",4
"lib2","SARS-CoV-2","AGACCATGGTACCAGT",3,41.19,6,-4.84,1.81,1.5,1.22,0.02,">1 nonsynonymous","W23H N40I V52E Q79H",4
"lib2","SARS-CoV-2","AGACCCAAACATAAAG",2,14.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L57R R179M",2
"lib2","SARS-CoV-2","AGACCCAAAGACACTG",6,38.37,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V11H S41P N107C F156V",4
"lib2","SARS-CoV-2","AGACCCAAGGAATTAT",1,7.97,10.74,-0.09,0.07,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCCAAGTGTCCGT",4,1.67,NA,NA,NA,NA,NA,NA,"stop","F8I K87* C102R N118T C158G",5
"lib2","SARS-CoV-2","AGACCCACGGCCTGGG",4,27.23,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T63Q V77P P82L T170P",4
"lib2","SARS-CoV-2","AGACCCAGCAATCTCC",3,72.12,9.73,-1.11,0.12,1.75,1.15,0.01,">1 nonsynonymous","Y39S Q84H D97F P149G",4
"lib2","SARS-CoV-2","AGACCCAGTAAATCAC",12,155,8.44,-2.4,0.07,1.94,1.09,0,">1 nonsynonymous","P82R F156K",2
"lib2","SARS-CoV-2","AGACCCATGGGCTAAT",18,197.29,10.48,-0.35,0.03,2.92,1.08,0,"1 nonsynonymous","K87W",1
"lib2","SARS-CoV-2","AGACCCATGTAAAAAA",5,41.35,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C61Y D68P E154L",3
"lib2","SARS-CoV-2","AGACCCCAAGAAATAC",4,44.59,10.82,-0.02,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCCCAATATCACT",11,116.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4W E10M Y35E S108Y E186H",5
"lib2","SARS-CoV-2","AGACCCCATCTTTCCC",5,230.42,9.56,-1.28,0.05,2.79,1.08,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","AGACCCCCAAAATATG",3,8.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L C6S D68K P161E",4
"lib2","SARS-CoV-2","AGACCCCCCCCCATCT",1,0.81,NA,NA,NA,NA,NA,NA,"stop","S43I K48E F62R K114* Q168S Y178N",6
"lib2","SARS-CoV-2","AGACCCCGATGGGTCT",8,63.22,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N64Y G101W",2
"lib2","SARS-CoV-2","AGACCCCTCGAGGAGC",2,29.78,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44L G51R C102L I142S F160Y",5
"lib2","SARS-CoV-2","AGACCCCTCGTCAACC",9,86.16,8.72,-2.12,0.08,1.55,1.15,0,">1 nonsynonymous","F44L N107C P149Y",3
"lib2","SARS-CoV-2","AGACCCCTTAAGTTCA",4,61.62,10.76,-0.08,0.05,2.96,1.05,0,">1 nonsynonymous","Y39K T55G T100C",3
"lib2","SARS-CoV-2","AGACCCCTTTAAAGAT",3,63.9,10.7,-0.13,0.09,2.68,1.06,0,">1 nonsynonymous","P149H H189I",2
"lib2","SARS-CoV-2","AGACCCGAAGGTCACA",12,91.86,8.31,-2.53,0.21,1.5,1,0.02,">1 nonsynonymous","G9F F134P",2
"lib2","SARS-CoV-2","AGACCCGAATGCAATG",11,4.38,NA,NA,NA,NA,NA,NA,"stop","Q84H C102W D112* A190S",4
"lib2","SARS-CoV-2","AGACCCGAATTTGACC",4,42.99,9.28,-1.56,0.09,1.67,1.09,0,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","AGACCCGGTTTATTAA",16,4.42,NA,NA,NA,NA,NA,NA,"stop","F12G V65S K128*",3
"lib2","SARS-CoV-2","AGACCCGTTACCAGGG",3,25.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S113K R136T N171K",3
"lib2","SARS-CoV-2","AGACCCTAACGACGAA",13,217.48,10.2,-0.63,0.05,2.74,1.05,0,">1 nonsynonymous","L57E K114R",2
"lib2","SARS-CoV-2","AGACCCTACAAGTCCA",1,55.92,10.08,-0.75,0.08,2.61,1.06,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","AGACCCTACATTTTCC",3,0.9,NA,NA,NA,NA,NA,NA,"stop","G51P L57P D68* D98A Y119R S139V Y165K T170M V180A",9
"lib2","SARS-CoV-2","AGACCCTATACAAAAC",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F12N P82T Y91G",4
"lib2","SARS-CoV-2","AGACCCTCATCATGAT",1,15.46,6,-4.84,1.44,1.5,1.13,0.02,">1 nonsynonymous","K56Y Y123D",2
"lib2","SARS-CoV-2","AGACCCTCCTACAAAA",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24Y K56L V65F",3
"lib2","SARS-CoV-2","AGACCCTGACACTCCC",3,37.63,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V11G P133I C150L E154N F185V",5
"lib2","SARS-CoV-2","AGACCGAAAACTCTCG",6,143.53,10.29,-0.55,0.04,2.84,1.03,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","AGACCGAAAGTTACCA",7,135.15,10.54,-0.29,0.04,2.89,1.08,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","AGACCGAACTAGTTGA",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L S129R E135L",3
"lib2","SARS-CoV-2","AGACCGAGGCAGTAAA",3,5.39,10.05,-0.79,0.15,2.79,1,0.01,">1 nonsynonymous","G9P G152C",2
"lib2","SARS-CoV-2","AGACCGAGTTCCAGTG",9,138.01,9.1,-1.73,0.09,1.75,1.08,0,">1 nonsynonymous","L57Y I142H",2
"lib2","SARS-CoV-2","AGACCGATAGCGTATG",8,95.02,8.5,-2.34,0.14,1.77,1.12,0.01,">1 nonsynonymous","C6G G117C S200E",3
"lib2","SARS-CoV-2","AGACCGATAGTACCTG",10,107.89,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A81N Y119L N157I",3
"lib2","SARS-CoV-2","AGACCGCAACATGAGG",8,45.34,8.56,-2.28,0.19,1.6,1.2,0.01,">1 nonsynonymous","R136S G152M V173N",3
"lib2","SARS-CoV-2","AGACCGCAAGGTGAGC",4,32.65,6.56,-4.27,0.34,1.5,1.12,0.01,">1 nonsynonymous","L38A V77E N120L",3
"lib2","SARS-CoV-2","AGACCGCAGGTGCCGG",11,76.81,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V65E D97G T140P T201M",4
"lib2","SARS-CoV-2","AGACCGCCAAACATTA",5,1.23,NA,NA,NA,NA,NA,NA,"stop","S19K S36G A42*",3
"lib2","SARS-CoV-2","AGACCGCCACATACGC",1,8.01,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","A14L V77M R127M",3
"lib2","SARS-CoV-2","AGACCGCCGTAGGTCT",5,63.85,10.83,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCGCGCTGTTAAT",2,20.27,9.87,-0.97,0.09,1.92,1.08,0,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","AGACCGGATGTTTGTG",6,131.26,10.85,0.02,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCGGCCAATCAGG",3,5.05,6,-4.84,2,3,1,0,">1 nonsynonymous","T55I R78M Y91T F126W",4
"lib2","SARS-CoV-2","AGACCGGGCTTTAGTG",4,17.19,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F12Y L38P I72R",3
"lib2","SARS-CoV-2","AGACCGGGGCCACTTG",2,17.82,10.4,-0.43,0.07,2.94,1.11,0,"1 nonsynonymous","F44A",1
"lib2","SARS-CoV-2","AGACCGTAGTTTAGCT",6,49.32,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T63V K87M L131H",3
"lib2","SARS-CoV-2","AGACCGTATCTGCTAC",2,0.09,NA,NA,NA,NA,NA,NA,"stop","F44S N120* T148Y Q168H V180G",5
"lib2","SARS-CoV-2","AGACCGTGAAATAGCT",6,48.21,6,-4.84,2,1.5,1.39,0.05,">1 nonsynonymous","I2E C6Y L60A D137K",4
"lib2","SARS-CoV-2","AGACCTAAGGGGGGAA",6,49.41,6,-4.84,1.79,1.5,1.1,0.03,">1 nonsynonymous","A42V D90F D137N F160S",4
"lib2","SARS-CoV-2","AGACCTAAGTTAATAC",5,67.78,10.8,-0.03,0.04,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCTAGCTATGTGA",4,55.06,9.52,-1.31,0.06,2.21,1.06,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AGACCTATGCCTCATA",6,36.6,8.37,-2.46,0.33,1.5,1.01,0.05,">1 nonsynonymous","G9I T15V L122C R136M N171T G174A",6
"lib2","SARS-CoV-2","AGACCTCATGGTGAAT",8,77.73,6.88,-3.96,0.31,1.5,1.11,0.02,">1 nonsynonymous","D137E P161S L188Q",3
"lib2","SARS-CoV-2","AGACCTCCCAAGCAAT",7,64.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S53M F70G G74Y N118V",4
"lib2","SARS-CoV-2","AGACCTCCGAGTAATT",6,60.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N110E G155I G172A",3
"lib2","SARS-CoV-2","AGACCTCTCTAAATTC",11,69.3,6,-4.84,2,3,1.21,0,">1 nonsynonymous","P96E F99Y",2
"lib2","SARS-CoV-2","AGACCTGAAGTTGAAT",5,49.54,10.44,-0.39,0.05,2.86,1.04,0,">1 nonsynonymous","N24M D97N",2
"lib2","SARS-CoV-2","AGACCTGACATGATAA",7,46.68,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S19E V181F",2
"lib2","SARS-CoV-2","AGACCTGACGATCCTT",1,5.43,10.86,0.02,0.1,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACCTGCTAGCCGTA",4,14.85,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","Y50C L162R Q168P",3
"lib2","SARS-CoV-2","AGACCTGGCAACCACA",4,24.6,7.17,-3.66,0.33,1.5,1.05,0.03,">1 nonsynonymous","N4L D75V D90F K198R",4
"lib2","SARS-CoV-2","AGACCTGGTGACCTCT",13,46.74,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C49R T100N G116V T148P Q168L",5
"lib2","SARS-CoV-2","AGACCTGTATGTAAAT",11,32.73,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","L95E D98N N109K L131I",4
"lib2","SARS-CoV-2","AGACCTGTGCTTGGGC",3,19.08,7.54,-3.3,0.32,1.5,1.13,0.04,">1 nonsynonymous","T3K Q144D Y165I",3
"lib2","SARS-CoV-2","AGACCTTAGCATTATT",2,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W I104S F160Q",3
"lib2","SARS-CoV-2","AGACCTTCAATGTCTC",3,49.88,6.2,-4.63,0.95,1.5,1.22,0.04,">1 nonsynonymous","Y50A Y121P",2
"lib2","SARS-CoV-2","AGACCTTTATTTGAGG",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L N120S P149M F160G",4
"lib2","SARS-CoV-2","AGACCTTTCAGTCCTT",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P197D",1
"lib2","SARS-CoV-2","AGACGAAAAGTTACCC",4,5.32,NA,NA,NA,NA,NA,NA,"stop","K26* L60I G155H",3
"lib2","SARS-CoV-2","AGACGAAACAGTAGGG",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64W S113Q",2
"lib2","SARS-CoV-2","AGACGAAATCAGGCCA",13,0.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","AGACGAAATCCACCGT",9,57,9.55,-1.29,0.08,1.78,1.07,0,">1 nonsynonymous","T3C R136F",2
"lib2","SARS-CoV-2","AGACGAACAACTGAAT",3,32.7,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T15E R27V K87Q F99D Y123I S129Q",6
"lib2","SARS-CoV-2","AGACGAACTGCAAATT",12,246.14,10,-0.84,0.05,2.67,1.04,0,">1 nonsynonymous","R27Q S108V",2
"lib2","SARS-CoV-2","AGACGAATGAAATTAG",3,67.38,10.78,-0.06,0.03,2.98,1.04,0,">1 nonsynonymous","G51N D98H",2
"lib2","SARS-CoV-2","AGACGAATGTGATAAA",4,51.99,8.6,-2.24,0.1,3,1.1,0,">1 nonsynonymous","L5M F126Y G174M L187A",4
"lib2","SARS-CoV-2","AGACGAATTTGCGCCA",14,0.25,NA,NA,NA,NA,NA,NA,"stop","C6D A89* N107R S139D",4
"lib2","SARS-CoV-2","AGACGACAAAACTAGT",3,31.79,10.9,0.06,0.08,2.9,1.1,0,">1 nonsynonymous","S41N A190V",2
"lib2","SARS-CoV-2","AGACGACAATGTCTAT",2,23.72,10.78,-0.05,0.05,2.99,1,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","AGACGACAGCCGGAAA",7,98.99,10.1,-0.74,0.08,2.15,1.06,0,">1 nonsynonymous","E76A E141G",2
"lib2","SARS-CoV-2","AGACGACATACAAACT",13,275.72,9.28,-1.56,0.04,2.53,1.09,0,">1 nonsynonymous","A14P T55E G166S",3
"lib2","SARS-CoV-2","AGACGACCGACAGTTG",4,39.56,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F8N I80S A81V G101Q K128C P161Q",6
"lib2","SARS-CoV-2","AGACGACGAAAGAAAT",3,46.24,10.81,-0.03,0.04,3,1.01,0,"1 nonsynonymous","N40G",1
"lib2","SARS-CoV-2","AGACGACGGAACACTT",6,17.41,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","P7R V11K S45C A67F K87M F99L T140S",7
"lib2","SARS-CoV-2","AGACGACGGAATGGAC",3,99.24,10.11,-0.73,0.09,2.39,1,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","AGACGACGTAACACGT",14,64.11,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D68N Y119Q",2
"lib2","SARS-CoV-2","AGACGACTCGGCAAAA",1,10.65,9.96,-0.88,0.18,2.09,1,0.02,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","AGACGACTCTGTGTCG",2,15.61,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","S45F V103S",2
"lib2","SARS-CoV-2","AGACGACTGGCGAAAA",2,64.17,10.76,-0.08,0.07,2.96,1.07,0,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","AGACGAGCAGAGAACT",3,53.63,9.86,-0.98,0.1,2.08,1,0,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","AGACGAGCCGTAGATC",1,78.93,8.79,-2.05,0.08,3,1.04,0,">1 nonsynonymous","C61S T170V",2
"lib2","SARS-CoV-2","AGACGAGTAAACGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib2","SARS-CoV-2","AGACGAGTCAGACGTG",3,68.13,10.11,-0.72,0.12,2.76,1,0.01,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","AGACGATAATATCCCG",7,188.21,9.22,-1.61,0.04,2.56,1.04,0,">1 nonsynonymous","G83F N118L",2
"lib2","SARS-CoV-2","AGACGATACAATGACT",15,150.25,9.64,-1.19,0.06,2.27,1.03,0,">1 nonsynonymous","R136W P149V",2
"lib2","SARS-CoV-2","AGACGATACAGATGTG",7,125.65,10.53,-0.3,0.06,2.85,1.07,0,"1 nonsynonymous","P169T",1
"lib2","SARS-CoV-2","AGACGATAGGAATATT",2,37.71,10.52,-0.31,0.04,2.98,1,0,">1 nonsynonymous","T63S V71L",2
"lib2","SARS-CoV-2","AGACGATATAATCCGA",1,11.6,10.95,0.11,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACGATGTAAATAGG",16,199.18,10.76,-0.08,0.03,2.94,1.07,0,">1 nonsynonymous","N110M L188V",2
"lib2","SARS-CoV-2","AGACGATTTGCAGAAC",1,1.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AGACGCAACAAAACAA",2,20.63,6.1,-4.74,0.5,3,1.21,0.01,">1 nonsynonymous","R25V N120G",2
"lib2","SARS-CoV-2","AGACGCACAAAAACAT",23,401.47,10.21,-0.62,0.02,2.9,1.04,0,"1 nonsynonymous","G155W",1
"lib2","SARS-CoV-2","AGACGCACAATACAAA",3,22.62,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGACGCACTCCTTCCT",5,201.1,9.68,-1.15,0.04,2.86,1.07,0,">1 nonsynonymous","F44R G174E",2
"lib2","SARS-CoV-2","AGACGCATATACCAGC",6,52.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16Y L38N N120P E141H",4
"lib2","SARS-CoV-2","AGACGCATATACGCCA",5,15.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63R D68G F160C",3
"lib2","SARS-CoV-2","AGACGCCAAGTTTAAA",4,26.96,10.01,-0.82,0.08,2.59,1.01,0,">1 nonsynonymous","S45E D90W D97L",3
"lib2","SARS-CoV-2","AGACGCCAGACCAAAC",2,1.19,NA,NA,NA,NA,NA,NA,"stop","T55N G146*",2
"lib2","SARS-CoV-2","AGACGCCAGATAACCA",1,19.33,9.74,-1.1,0.12,2.65,1,0.01,">1 nonsynonymous","K128T Y165M",2
"lib2","SARS-CoV-2","AGACGCCCGATGACAT",5,98.57,10.84,0.01,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACGCCGACCAGTGA",6,86.86,10.11,-0.73,0.09,2.39,1.03,0,">1 nonsynonymous","Y39C F160N Y178S L188I",4
"lib2","SARS-CoV-2","AGACGCGATTCTGCTG",3,14.99,6.82,-4.02,1.06,1.52,1.14,0.03,">1 nonsynonymous","S45F G86M W106Q G116V P169W R179M",6
"lib2","SARS-CoV-2","AGACGCGATTTAATGC",9,217.23,10.37,-0.47,0.03,2.88,1.07,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","AGACGCGCACCGACAA",13,0.65,NA,NA,NA,NA,NA,NA,"stop","N64L K128* T201N",3
"lib2","SARS-CoV-2","AGACGCGGAAAAACTT",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I F99L A192L",3
"lib2","SARS-CoV-2","AGACGCGTGCAAAGTA",5,39.16,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S69A A89Y K128E G155W",4
"lib2","SARS-CoV-2","AGACGCTCACACTAGT",5,34.23,6.52,-4.32,0.6,1.5,1.24,0.06,">1 nonsynonymous","S45N T55S F62R V71P T100L E141R T201N",7
"lib2","SARS-CoV-2","AGACGCTCACAGGTGA",28,263.41,10.51,-0.33,0.03,2.89,1.04,0,">1 nonsynonymous","F12I D97S",2
"lib2","SARS-CoV-2","AGACGCTCCGAAACCA",3,60,9.98,-0.86,0.05,2.92,1.01,0,">1 nonsynonymous","K56W K87H N151T",3
"lib2","SARS-CoV-2","AGACGCTGAAATAAAA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L S19M S36Y L57R E154R G166L",6
"lib2","SARS-CoV-2","AGACGCTTACTTGAAA",11,116.8,10.29,-0.55,0.03,2.92,1.03,0,">1 nonsynonymous","C6T T201E",2
"lib2","SARS-CoV-2","AGACGCTTGAATCGCC",1,10.63,10.01,-0.82,0.14,2.8,1.01,0,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","AGACGCTTTTCGATAT",3,9.74,6.11,-4.72,2,3,1.06,0.01,">1 nonsynonymous","P96L L111C L122A G146I S184P",5
"lib2","SARS-CoV-2","AGACGGAAAACTATGC",4,78.38,6.29,-4.54,0.61,1.5,1.22,0.02,">1 nonsynonymous","C61R D90G Y159I",3
"lib2","SARS-CoV-2","AGACGGAAAATTAAAC",1,20.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F44S R78Q V103D N110I",4
"lib2","SARS-CoV-2","AGACGGAACAATTCGA",4,114.43,10.09,-0.75,0.06,2.5,1.06,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AGACGGAACGCCAACT",8,71.86,6.23,-4.61,0.81,1.5,1.2,0.04,">1 nonsynonymous","D68L R136V",2
"lib2","SARS-CoV-2","AGACGGAAGGTGCCCT",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A C49S W106Y",3
"lib2","SARS-CoV-2","AGACGGAATCATCAAT",19,328.2,10.73,-0.11,0.03,2.93,1.07,0,"1 nonsynonymous","G196R",1
"lib2","SARS-CoV-2","AGACGGAATGATAAAG",7,18.5,6,-4.84,1.22,3,1.1,0.01,">1 nonsynonymous","N40H V182G",2
"lib2","SARS-CoV-2","AGACGGACAAGAGTTT",4,87.58,8.65,-2.19,0.07,2.92,1.1,0,">1 nonsynonymous","T63G N157H K199Y",3
"lib2","SARS-CoV-2","AGACGGACAGAAATCC",16,159.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44T Y50H G166M",3
"lib2","SARS-CoV-2","AGACGGACATATTAAG",2,10.62,6,-4.84,2,3,1.16,0.03,">1 nonsynonymous","A81G F99R G116L",3
"lib2","SARS-CoV-2","AGACGGACCATCGACC",2,42.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5A Y119C C158S",3
"lib2","SARS-CoV-2","AGACGGACCTAAAGAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","G9* K94W",2
"lib2","SARS-CoV-2","AGACGGCCAAGGCTAA",4,17.93,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3N S41H G86S G152L H189N",5
"lib2","SARS-CoV-2","AGACGGCCGCAATAAA",5,65.54,10.87,0.03,0.06,2.84,1.18,0,">1 nonsynonymous","I2R V37E T201C",3
"lib2","SARS-CoV-2","AGACGGCGATATTAAT",6,47.99,10.18,-0.66,0.06,2.72,1.02,0,">1 nonsynonymous","L5R L57K P149A",3
"lib2","SARS-CoV-2","AGACGGCGGCCAGTCA",6,60.19,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91E F99T C158L",3
"lib2","SARS-CoV-2","AGACGGCTTCGTACCT",2,178.84,10.3,-0.54,0.03,2.91,1.05,0,">1 nonsynonymous","T100R N118A",2
"lib2","SARS-CoV-2","AGACGGCTTTACATTA",9,1.52,NA,NA,NA,NA,NA,NA,"stop","A18* G166L",2
"lib2","SARS-CoV-2","AGACGGGAAATGAGAA",2,13.13,9.35,-1.48,0.27,1.61,1.08,0.04,">1 nonsynonymous","P133T I142W",2
"lib2","SARS-CoV-2","AGACGGGAGGTTAACA",1,30.65,9.97,-0.86,0.2,2.19,1.05,0.01,">1 nonsynonymous","E10A S36R T46A D59M Q168R K198F",6
"lib2","SARS-CoV-2","AGACGGGGACAGTTCT",3,50.71,10.54,-0.3,0.07,2.9,1.08,0,">1 nonsynonymous","I88V K132H",2
"lib2","SARS-CoV-2","AGACGGGGTTTGCAAA",2,41.96,10.85,0.01,0.05,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACGGGTCCCCATAA",7,43.54,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","W106S R127P D137V",3
"lib2","SARS-CoV-2","AGACGGTACAACCCAG",3,8.19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6D A14Y D34I F44L K128L",5
"lib2","SARS-CoV-2","AGACGTAAAGTGAAGG",13,104.75,8.45,-2.39,0.13,1.66,1.11,0.01,">1 nonsynonymous","C6S F44C T140V",3
"lib2","SARS-CoV-2","AGACGTAAATGAGTTG",1,40.81,8.29,-2.54,0.12,2.82,1.06,0.01,">1 nonsynonymous","T46Y G117E S184L",3
"lib2","SARS-CoV-2","AGACGTAATTTAAAAT",3,34.51,8.99,-1.84,0.08,2.45,1.12,0,">1 nonsynonymous","E141Y S164D",2
"lib2","SARS-CoV-2","AGACGTACGATATTAT",4,39.61,10.92,0.08,0.08,2.93,1.06,0,">1 nonsynonymous","V153F V173R T201N",3
"lib2","SARS-CoV-2","AGACGTAGACCTAATT",9,89.53,9.95,-0.89,0.07,2.56,1.01,0,">1 nonsynonymous","S53Y Y121Q G146S G196K",4
"lib2","SARS-CoV-2","AGACGTAGCGTGCATT",4,59.74,10.77,-0.07,0.06,2.96,1.06,0,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","AGACGTAGTACACTAG",1,47.67,10.41,-0.42,0.07,3,1,0,">1 nonsynonymous","C61V A89C",2
"lib2","SARS-CoV-2","AGACGTAGTGACGTAA",6,57.24,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R27F V37E Q79K D90N P96R I104L",6
"lib2","SARS-CoV-2","AGACGTATACTCCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* F44S D90L T100S",4
"lib2","SARS-CoV-2","AGACGTATTGTAAACA",9,56.81,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F47S D68R K94N P161K",4
"lib2","SARS-CoV-2","AGACGTCTATATCCTC",2,44.5,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I138T P177N",2
"lib2","SARS-CoV-2","AGACGTGACCTACTTA",10,23.17,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T3K R16M A33S I72S A105C Y143L",6
"lib2","SARS-CoV-2","AGACGTGGACCGTCAC",4,15.01,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y91D F99I E141W L162T",4
"lib2","SARS-CoV-2","AGACGTGGGGAAAGGC",12,44.29,9.42,-1.42,0.08,2.59,1.11,0,"1 nonsynonymous","G74Y",1
"lib2","SARS-CoV-2","AGACGTTAACCTCCTA",8,75.15,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V37C K56R P161Y",3
"lib2","SARS-CoV-2","AGACGTTGGTTACGCC",10,114.68,10.84,0,0.06,2.88,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACGTTGTATCGAAG",3,20.88,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T3P F99I P149T F167D",4
"lib2","SARS-CoV-2","AGACGTTTGTGTTGGT",5,127.07,6.98,-3.86,0.37,1.5,1.18,0.03,">1 nonsynonymous","N40E W106I Y119I T201L",4
"lib2","SARS-CoV-2","AGACTAAACCTCCATA",2,66.46,10.26,-0.58,0.05,2.93,1.06,0,">1 nonsynonymous","E10G K87F F160Q T201E",4
"lib2","SARS-CoV-2","AGACTAAAGAGGCCGC",4,7.59,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","F12T D59R V103L T140I",4
"lib2","SARS-CoV-2","AGACTAAATATTATGT",2,42.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V65P D112T K132T",3
"lib2","SARS-CoV-2","AGACTAACCAGTTACG",9,68.27,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V20M G86F C150T F185C",4
"lib2","SARS-CoV-2","AGACTAACGAAGTAGT",2,24.09,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A105K N157G",2
"lib2","SARS-CoV-2","AGACTAACTCCGTTGA",5,106.76,10.86,0.02,0.05,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AGACTAAGATCCCGAG",8,46.05,9.92,-0.92,0.11,1.93,1,0.01,">1 nonsynonymous","V103M S184W",2
"lib2","SARS-CoV-2","AGACTAAGCTACTTGC",1,52.86,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","E10G Y39N T55F L95Q R136S",5
"lib2","SARS-CoV-2","AGACTAATAATATAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","Y119* G166C P177S",3
"lib2","SARS-CoV-2","AGACTAATATGACTAA",5,15.63,6.28,-4.55,1.28,1.5,1.21,0.04,">1 nonsynonymous","S41G K56S G86E I104D P149L G174Y",6
"lib2","SARS-CoV-2","AGACTAATCCCTGAAA",5,66.12,9.36,-1.47,0.07,1.76,1.1,0,">1 nonsynonymous","I2L L131S",2
"lib2","SARS-CoV-2","AGACTACAAAACACGA",3,35.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9C T15M Y66E S108Y Y123L",5
"lib2","SARS-CoV-2","AGACTACACAAGAGTT",1,40.69,10.57,-0.26,0.06,2.87,1.11,0,">1 nonsynonymous","D75R K132E",2
"lib2","SARS-CoV-2","AGACTACACGTACTTA",11,79.01,7.54,-3.3,0.3,1.5,1.17,0.02,">1 nonsynonymous","G86M K132S",2
"lib2","SARS-CoV-2","AGACTACATGGAAATG",11,22.49,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F44R I88C C158Q G172P",4
"lib2","SARS-CoV-2","AGACTACCCAAATTTA",6,60.27,10.55,-0.28,0.05,2.86,1.14,0,"1 nonsynonymous","S129W",1
"lib2","SARS-CoV-2","AGACTACCTATTAAAT",9,272.02,9.95,-0.89,0.05,2.39,1.06,0,">1 nonsynonymous","P7V Y66S",2
"lib2","SARS-CoV-2","AGACTACCTCAAGAAA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","G9M T63H K87* A105S L183P",5
"lib2","SARS-CoV-2","AGACTACCTGAACACA",8,40.53,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","P82E G101S Y165S P197R",4
"lib2","SARS-CoV-2","AGACTACGGTGCGGCT",1,44.46,10.28,-0.56,0.11,2.73,1.06,0.01,">1 nonsynonymous","V20A N110M",2
"lib2","SARS-CoV-2","AGACTACGTCACAATC",3,52.44,9.25,-1.59,0.11,2.27,1.11,0,">1 nonsynonymous","N1M V37N G146R",3
"lib2","SARS-CoV-2","AGACTACGTGAAAACG",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L I80R C102Y P149H",4
"lib2","SARS-CoV-2","AGACTACTCGAGATTC",7,189.6,10.75,-0.08,0.03,2.94,1.06,0,">1 nonsynonymous","P54Y K198S",2
"lib2","SARS-CoV-2","AGACTAGAAACAAAGT",4,35.27,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F47N C61P N92R Q144S V153T",5
"lib2","SARS-CoV-2","AGACTAGATGAGTAGG",8,121.62,10.73,-0.11,0.05,2.86,1.1,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","AGACTAGGATGACGCG",13,181.25,10.81,-0.03,0.04,2.97,1.05,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","AGACTATAATAAGACT",9,225.13,10.44,-0.4,0.03,2.85,1.11,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","AGACTATAATAGACTA",2,34.96,9.74,-1.09,0.04,2.95,1.07,0,"1 nonsynonymous","T170R",1
"lib2","SARS-CoV-2","AGACTATACATTTTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35G A42W Q79* K87Y P96S S200E",6
"lib2","SARS-CoV-2","AGACTATATATCGTTA",1,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","AGACTATTCTAATTAA",5,40.82,8.22,-2.62,0.23,1.59,1.06,0.02,">1 nonsynonymous","G51T Y143C",2
"lib2","SARS-CoV-2","AGACTATTTAAATATT",2,109.29,10.17,-0.66,0.04,2.99,1.01,0,">1 nonsynonymous","I2T F126V",2
"lib2","SARS-CoV-2","AGACTCAATACCCCAC",1,20.17,10.88,0.05,0.07,2.75,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACTCAGACTTGTGT",2,63.53,9.29,-1.54,0.1,2.73,1.08,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","AGACTCAGATACGACA",10,159.69,10.24,-0.59,0.03,2.78,1.07,0,">1 nonsynonymous","V32T T100D K198R",3
"lib2","SARS-CoV-2","AGACTCAGCAGTTAGC",5,42.5,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N1Q C61D N107Y L187S",4
"lib2","SARS-CoV-2","AGACTCAGGATCAAGT",5,79.35,6.54,-4.3,0.38,1.5,1.1,0.02,">1 nonsynonymous","L5I I72C Y159C",3
"lib2","SARS-CoV-2","AGACTCATAAAATCAA",3,18.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S19K F44V I80G T85V",4
"lib2","SARS-CoV-2","AGACTCATAAAGAAAC",7,94.53,10.77,-0.06,0.08,2.84,1.06,0,">1 nonsynonymous","Y39T D97F V173R",3
"lib2","SARS-CoV-2","AGACTCATACAGTCAT",2,61.98,10.05,-0.78,0.35,1.5,1,0.05,">1 nonsynonymous","S19W K114V Y121L S200W",4
"lib2","SARS-CoV-2","AGACTCATATTGCACC",6,103.27,10.79,-0.05,0.04,2.96,1.04,0,"1 nonsynonymous","R16L",1
"lib2","SARS-CoV-2","AGACTCATGAAGACTA",10,83.41,6.26,-4.58,0.43,1.5,1.16,0.01,">1 nonsynonymous","V77E G152L",2
"lib2","SARS-CoV-2","AGACTCCAACACTTGC",13,91.06,9.54,-1.29,0.1,2.24,1.06,0,">1 nonsynonymous","N1Y K56E C61D N107P F160S",5
"lib2","SARS-CoV-2","AGACTCCAACTAAAAT",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L G101A N107A E141S",4
"lib2","SARS-CoV-2","AGACTCCATGAATCGT",7,26.49,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S41L Y93T Y143T",3
"lib2","SARS-CoV-2","AGACTCCCAGAAGTAT",1,74.59,10,-0.84,0.05,2.47,1.13,0,">1 nonsynonymous","F62A Y123I",2
"lib2","SARS-CoV-2","AGACTCCCGTAACACA",1,10.61,10.24,-0.59,0.06,3,1.07,0,">1 nonsynonymous","Y39I S43N F62K",3
"lib2","SARS-CoV-2","AGACTCCCTTAACCAG",12,31.1,9.36,-1.47,0.41,1.73,1.15,0.08,">1 nonsynonymous","F17V S41L F185K",3
"lib2","SARS-CoV-2","AGACTCCTAAGGTCGG",3,8.66,7.59,-3.24,0.97,1.5,1.06,0.04,"1 nonsynonymous","V181P",1
"lib2","SARS-CoV-2","AGACTCCTGCTATATA",3,65.34,10.82,-0.02,0.07,3,1.02,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","AGACTCCTTTGCTCTG",1,45.13,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y93P F160V",2
"lib2","SARS-CoV-2","AGACTCGACCTATATA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48V Y91S T100I S164Y",4
"lib2","SARS-CoV-2","AGACTCGCACTTCTTA",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106I C158Y",2
"lib2","SARS-CoV-2","AGACTCGCAGAAACTC",1,64.71,8.84,-2,0.17,1.5,1.04,0.01,">1 nonsynonymous","V65Y Y178I",2
"lib2","SARS-CoV-2","AGACTCGCGAACAGAT",13,128.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V52I L60P S108C Y165L",4
"lib2","SARS-CoV-2","AGACTCGGAATTAATA",1,17.46,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","I2L A18S V32S G86I Y165C",5
"lib2","SARS-CoV-2","AGACTCGTCATCTCCA",5,51.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2L W23L Y50P S53F N64G N157Y",6
"lib2","SARS-CoV-2","AGACTCGTCTACACCC",5,0.68,NA,NA,NA,NA,NA,NA,"stop","R16V K56*",2
"lib2","SARS-CoV-2","AGACTCTACAAACAAC",7,105.05,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12Y N92P N120R Y165I N171V",5
"lib2","SARS-CoV-2","AGACTCTACGGATCCT",3,39.29,10.59,-0.25,0.07,2.95,1.04,0,">1 nonsynonymous","I2T A42S D97S",3
"lib2","SARS-CoV-2","AGACTCTATGACCAAT",20,363.71,7.91,-2.93,0.06,2.48,1.09,0,">1 nonsynonymous","K87E Y159L",2
"lib2","SARS-CoV-2","AGACTCTCGAACTTAG",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83Y L131C S139A C150F",4
"lib2","SARS-CoV-2","AGACTCTTTAAGACAA",2,21.22,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R16Q F99Y R179G",3
"lib2","SARS-CoV-2","AGACTCTTTGCACATT",4,33.87,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G117R Q176K L187F",3
"lib2","SARS-CoV-2","AGACTGAAACATTCGA",2,21.9,8.46,-2.37,0.14,3,1.08,0.01,">1 nonsynonymous","N120E N157L",2
"lib2","SARS-CoV-2","AGACTGAAGACATGAA",6,1.35,NA,NA,NA,NA,NA,NA,"stop","A14G Y35E D59* D68L A81* Y123L",6
"lib2","SARS-CoV-2","AGACTGAAGGCCTCTT",2,19.21,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F62H Y91H K94L F134I V180S",5
"lib2","SARS-CoV-2","AGACTGACAATAACAT",7,40.14,6,-4.84,1.47,1.5,1.14,0.01,">1 nonsynonymous","Y50L S113L Y119Q R136S G155F S200V",6
"lib2","SARS-CoV-2","AGACTGACATAGCCCA",2,806.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3K A22T P133A V173T S200F",5
"lib2","SARS-CoV-2","AGACTGACCAGATGGC",8,14.79,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R127V I138T",2
"lib2","SARS-CoV-2","AGACTGACCCGTACCC",4,101.28,10.89,0.06,0.04,2.92,1.09,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","AGACTGACGACCACTA",3,21.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V N120L N151T",3
"lib2","SARS-CoV-2","AGACTGAGAATTATCG",1,18.92,10.29,-0.54,0.08,2.82,1.05,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","AGACTGAGAGGTTAAG",5,36.83,10.88,0.05,0.04,2.91,1.09,0,">1 nonsynonymous","T148A T201N",2
"lib2","SARS-CoV-2","AGACTGAGGATGTACA",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M N13I F99H T140E N151K",5
"lib2","SARS-CoV-2","AGACTGAGTTTCGTAA",2,20.28,10.07,-0.77,0.09,2.73,1.01,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","AGACTGATAATCCTCC",1,7.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L P133G G166V Y178P",4
"lib2","SARS-CoV-2","AGACTGATACAAACAA",5,120.45,10.8,-0.04,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGACTGATAGTTTAGT",3,5.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y L60R G86W",3
"lib2","SARS-CoV-2","AGACTGCAAATTTCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Q C102L",2
"lib2","SARS-CoV-2","AGACTGCATGTTCGAC",10,71.13,10.62,-0.21,0.03,2.93,1.06,0,">1 nonsynonymous","G83S N130I",2
"lib2","SARS-CoV-2","AGACTGGAAATGATTT",1,18.26,10.26,-0.57,0.09,2.77,1,0,">1 nonsynonymous","N13E N151V",2
"lib2","SARS-CoV-2","AGACTGGAGGACCCCG",3,18.31,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9R A89R Y119W P149A",4
"lib2","SARS-CoV-2","AGACTGGATATAAACC",12,8.8,NA,NA,NA,NA,NA,NA,"stop","F44* K87P W106* G146V",4
"lib2","SARS-CoV-2","AGACTGGCAACAATAG",4,50.99,10.82,-0.01,0.04,2.93,1.1,0,"1 nonsynonymous","T85N",1
"lib2","SARS-CoV-2","AGACTGGGCATGAATC",4,25.72,10.6,-0.24,0.08,2.94,1.05,0,">1 nonsynonymous","P7Q V52F T100N",3
"lib2","SARS-CoV-2","AGACTGTACTATAATT",1,12.4,6,-4.84,1.51,3,1.08,0.01,">1 nonsynonymous","D90S V103L S139L Q163K",4
"lib2","SARS-CoV-2","AGACTGTATTTGACGT",2,11.3,6,-4.84,0.84,1.5,1.06,0,">1 nonsynonymous","I80K S200V",2
"lib2","SARS-CoV-2","AGACTGTCGTTGCAGT",4,29.52,9.12,-1.71,0.21,1.5,1.11,0.02,">1 nonsynonymous","F17C K26W",2
"lib2","SARS-CoV-2","AGACTGTCTACTATTA",7,80.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5R T85L N120I R127L I142R",5
"lib2","SARS-CoV-2","AGACTGTTGGATTGCT",6,111.84,10.12,-0.72,0.06,2.46,1.05,0,">1 nonsynonymous","W106T T201P",2
"lib2","SARS-CoV-2","AGACTTAAAACGAAAG",6,51.41,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36L D112T G146L",3
"lib2","SARS-CoV-2","AGACTTAACCAAAGGG",9,25.62,9.6,-1.24,0.16,1.98,1.12,0.02,">1 nonsynonymous","C61Y D90L F160G",3
"lib2","SARS-CoV-2","AGACTTAACGCCTAAC",4,66.65,10.73,-0.11,0.06,2.95,1.05,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","AGACTTAAGTAGATAT",1,0.69,NA,NA,NA,NA,NA,NA,"stop","S45* A89K I142P L162E",4
"lib2","SARS-CoV-2","AGACTTAATAAATCCG",4,20.38,10.26,-0.58,0.05,2.9,1.1,0,"1 nonsynonymous","G152V",1
"lib2","SARS-CoV-2","AGACTTAATAAGATCA",7,82.5,10.93,0.09,0.05,2.95,1.05,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","AGACTTAATAGCTTGG",8,84.86,6.25,-4.59,0.53,1.5,1.17,0.01,">1 nonsynonymous","N1W A105T L162Y",3
"lib2","SARS-CoV-2","AGACTTACTCAAAAGG",16,138.38,6,-4.84,1.74,1.5,1.21,0.01,">1 nonsynonymous","V37L N58S D68V T148M",4
"lib2","SARS-CoV-2","AGACTTAGAACAAGTC",1,37.01,10.23,-0.6,0.07,2.85,1.05,0,">1 nonsynonymous","L5P K56L F185Y",3
"lib2","SARS-CoV-2","AGACTTAGAACCATGG",10,139.8,10.88,0.04,0.06,2.89,1.08,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","AGACTTAGAAGTTAGC",2,59.98,10.68,-0.15,0.03,2.88,1.09,0,">1 nonsynonymous","P149L F160T",2
"lib2","SARS-CoV-2","AGACTTAGGATAGCCA",1,9.8,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","AGACTTAGTGTATGCC",9,157.06,10.13,-0.7,0.05,2.79,1.08,0,">1 nonsynonymous","F8V I104M F160R",3
"lib2","SARS-CoV-2","AGACTTAGTTGCCAAA",4,30.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17V T63N F70V N92T S147K",5
"lib2","SARS-CoV-2","AGACTTATACAGCAAA",5,117.02,10.75,-0.09,0.08,2.9,1.08,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","AGACTTATACATTTGA",2,39.7,10.35,-0.49,0.05,2.95,1.03,0,">1 nonsynonymous","S36V D98S A190P",3
"lib2","SARS-CoV-2","AGACTTATATATAAGG",11,1.36,NA,NA,NA,NA,NA,NA,"stop","S19* L57N",2
"lib2","SARS-CoV-2","AGACTTATATATGAGG",5,37.57,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","D59I L95R V180Q",3
"lib2","SARS-CoV-2","AGACTTATGATGTGAA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","R124H S139R P149*",3
"lib2","SARS-CoV-2","AGACTTCAAACGCAGG",5,96.02,10.01,-0.83,0.06,2.44,1.03,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","AGACTTCAAAGACCGG",5,53.63,9.6,-1.24,0.09,2.57,1.09,0,">1 nonsynonymous","G9M R16I S36K G152N G174P S200L",6
"lib2","SARS-CoV-2","AGACTTCAGTGATGCG",2,54.71,10.87,0.03,0.04,3,1.03,0,">1 nonsynonymous","I28L L122A",2
"lib2","SARS-CoV-2","AGACTTCCCTAAAATT",11,3.08,NA,NA,NA,NA,NA,NA,"stop","R16F D90* D98G V103Q Q176R",5
"lib2","SARS-CoV-2","AGACTTCCTAGTCATG",2,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L L60R P133Q F185Y",4
"lib2","SARS-CoV-2","AGACTTCGAATAGGTC",4,40,9.94,-0.89,0.13,2.34,1.03,0.01,">1 nonsynonymous","A14C G152L",2
"lib2","SARS-CoV-2","AGACTTCTACTCATAT",7,91.62,6.32,-4.52,0.49,1.5,1.11,0.02,">1 nonsynonymous","F8D G117V",2
"lib2","SARS-CoV-2","AGACTTCTCATTCGCC",5,89.24,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V32N S45L Y91L A105G",4
"lib2","SARS-CoV-2","AGACTTGAAAAACAGT",1,27.29,8,-2.83,0.18,1.52,1.18,0.02,">1 nonsynonymous","S129T C150T",2
"lib2","SARS-CoV-2","AGACTTGAATATTGTA",11,277.99,10.53,-0.31,0.02,2.89,1.09,0,"1 nonsynonymous","G116L",1
"lib2","SARS-CoV-2","AGACTTGGCCGGAACT",15,328.68,10.63,-0.2,0.02,2.98,1.02,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AGACTTGTATTTAAAA",2,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N L38S Q163I S200R",4
"lib2","SARS-CoV-2","AGACTTGTCTGCAGGA",2,27.96,10.71,-0.12,0.07,2.9,1.07,0,">1 nonsynonymous","N1Y G196A",2
"lib2","SARS-CoV-2","AGACTTGTGAACCTCA",1,14.07,10.94,0.1,0.08,2.82,1.18,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","AGACTTGTGCCGAGAT",6,15.3,7.82,-3.01,0.38,1.5,1,0.05,">1 nonsynonymous","S19T A105L",2
"lib2","SARS-CoV-2","AGACTTGTGTCCAAAG",8,109.67,8.71,-2.13,0.07,2.02,1.05,0,">1 nonsynonymous","E10L N107D",2
"lib2","SARS-CoV-2","AGACTTTATCCTAAGG",9,81.57,6,-4.84,1.32,1.5,1.1,0,">1 nonsynonymous","I2L D112M G117P L125P",4
"lib2","SARS-CoV-2","AGACTTTGAGTCCAGG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57C P96L N107Y",3
"lib2","SARS-CoV-2","AGACTTTTATCAATGA",8,0.36,NA,NA,NA,NA,NA,NA,"stop","Y35H L60*",2
"lib2","SARS-CoV-2","AGACTTTTCTCGCAAA",4,25.59,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","C49S A89V N130L I138P P149Y P161V",6
"lib2","SARS-CoV-2","AGAGAAAAATTTTTAG",4,0.63,NA,NA,NA,NA,NA,NA,"stop","K48F G155*",2
"lib2","SARS-CoV-2","AGAGAAAAGGATTTGA",9,82.73,10.32,-0.52,0.06,2.88,1.03,0,">1 nonsynonymous","R27L T55V F126V S147N",4
"lib2","SARS-CoV-2","AGAGAAAATATTTCCC",7,92.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T55Y R127E P161M",3
"lib2","SARS-CoV-2","AGAGAAAATTCAAAAA",12,4.4,NA,NA,NA,NA,NA,NA,"stop","I2Q Y39K T46Y I104S L111T S139*",6
"lib2","SARS-CoV-2","AGAGAAACAAAATAGG",2,7.38,9.42,-1.42,0.17,2.6,1,0.01,">1 nonsynonymous","L5K K128C I138V P169W",4
"lib2","SARS-CoV-2","AGAGAAACATCTCTGG",4,92.14,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N120E G172L P197Y",3
"lib2","SARS-CoV-2","AGAGAAACATGTAACT",6,4.28,NA,NA,NA,NA,NA,NA,"stop","N1* L5K V11Y S45R A105T",5
"lib2","SARS-CoV-2","AGAGAAACGAGACAAG",7,57.85,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","C61R F156G L162T",3
"lib2","SARS-CoV-2","AGAGAAACTGCTACTT",3,1.18,NA,NA,NA,NA,NA,NA,"stop","N107G S139*",2
"lib2","SARS-CoV-2","AGAGAAACTGGAGGTT",5,39.01,10.18,-0.65,0.05,2.9,1.07,0,">1 nonsynonymous","V37I P169L V173E",3
"lib2","SARS-CoV-2","AGAGAAAGAAAAACAA",17,180.25,10.76,-0.07,0.04,2.92,1.11,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","AGAGAAAGCCTTCATA",1,8.32,9.45,-1.39,0.31,2.06,1.21,0.03,">1 nonsynonymous","A81S P133Q",2
"lib2","SARS-CoV-2","AGAGAAAGTCAACGCA",12,147.96,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11N W23M N107K R179S",4
"lib2","SARS-CoV-2","AGAGAAATGCAGAGTG",2,28.37,10.49,-0.35,0.06,2.83,1.19,0,">1 nonsynonymous","F44D N64Y S139T",3
"lib2","SARS-CoV-2","AGAGAAATTAAAGTAA",3,33.07,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","K56L Y93S N118V Y119H V173R A190N",6
"lib2","SARS-CoV-2","AGAGAAATTACCCACC",2,13.46,9.76,-1.07,0.19,2.05,1.12,0.01,">1 nonsynonymous","F62E D90H",2
"lib2","SARS-CoV-2","AGAGAACAAATTAGAG",12,5.74,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I2L Y50E D98I E186I",4
"lib2","SARS-CoV-2","AGAGAACAGAGGACTT",9,1.13,NA,NA,NA,NA,NA,NA,"stop","F62A L131* Q144L",3
"lib2","SARS-CoV-2","AGAGAACATATCGTCA",5,47.48,9.71,-1.12,0.09,2.29,1.05,0,">1 nonsynonymous","S41G E135W F160A",3
"lib2","SARS-CoV-2","AGAGAACATTAAACCG",5,68.76,10.78,-0.06,0.04,2.95,1.05,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","AGAGAACCAACCGCTA",2,24.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2E R124G T148N",3
"lib2","SARS-CoV-2","AGAGAACCAATTCAAG",5,106.41,10.86,0.02,0.06,2.92,1.09,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","AGAGAACCCCTTGGGT",13,0.75,NA,NA,NA,NA,NA,NA,"stop","D90R C102W N120* C150I",4
"lib2","SARS-CoV-2","AGAGAACCGGAATCTA",4,64.27,9.33,-1.51,0.04,2.89,1.05,0,">1 nonsynonymous","S41R Y119S",2
"lib2","SARS-CoV-2","AGAGAACCTTTTAATC",15,196.62,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A33W P161C G166P",3
"lib2","SARS-CoV-2","AGAGAACGAAGCAAAC",7,93.87,9.03,-1.8,0.06,1.87,1.04,0,">1 nonsynonymous","S19R F126L S200I",3
"lib2","SARS-CoV-2","AGAGAACTAGCACAGG",10,76.67,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N24I S108P",2
"lib2","SARS-CoV-2","AGAGAAGAAATGCACT",3,91.83,10.25,-0.59,0.06,2.79,1.08,0,">1 nonsynonymous","K26V T85L L95V",3
"lib2","SARS-CoV-2","AGAGAAGAAGCTAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L S69L V77M G83M A89P K94S",6
"lib2","SARS-CoV-2","AGAGAAGAATTAGCGA",11,86.42,10.81,-0.03,0.07,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGAAGACTCTGTCA",3,15.2,10.8,-0.03,0.08,3,1.02,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","AGAGAAGAGGTAACAC",10,8.62,NA,NA,NA,NA,NA,NA,"stop","S36L A105* P149H G152V Y165W A190V",6
"lib2","SARS-CoV-2","AGAGAAGCATATACGC",12,32.21,6,-4.84,1.58,1.5,1.16,0,">1 nonsynonymous","D59G S113M G174D S184F",4
"lib2","SARS-CoV-2","AGAGAAGCATGCAACT",12,48.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V115R S139T P177G",3
"lib2","SARS-CoV-2","AGAGAAGCGTTTACTT",5,52.21,6.34,-4.49,0.58,1.5,1.19,0.02,">1 nonsynonymous","E10P S53L W106R N151T",4
"lib2","SARS-CoV-2","AGAGAAGGTATTCTCA",4,50.37,7.28,-3.55,0.3,1.5,1.1,0.03,">1 nonsynonymous","A89D N151S",2
"lib2","SARS-CoV-2","AGAGAAGTAGGCGCGG",2,37.07,9.09,-1.74,0.06,2.63,1.05,0,">1 nonsynonymous","C6Y G155N",2
"lib2","SARS-CoV-2","AGAGAAGTCAGCAAAA",2,56.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K48W S69G L95I D112E P149S",5
"lib2","SARS-CoV-2","AGAGAATAAGCGCAAT",1,26.28,8.91,-1.92,0.24,1.69,1.08,0.02,"1 nonsynonymous","L162W",1
"lib2","SARS-CoV-2","AGAGAATACTCAAACA",13,53.69,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N64R I104T Y165L",3
"lib2","SARS-CoV-2","AGAGAATAGCTGTTTA",3,25.14,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23L I88S D98E N120S",4
"lib2","SARS-CoV-2","AGAGAATATATATTGG",4,54.75,10.91,0.08,0.06,2.89,1.12,0,"1 nonsynonymous","L187K",1
"lib2","SARS-CoV-2","AGAGAATATGCGACTA",1,5.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C D97S K132N Y165R V173D T193Y V194G",7
"lib2","SARS-CoV-2","AGAGAATCATCTCTAT",8,71.36,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L60S P82M Y91N",3
"lib2","SARS-CoV-2","AGAGAATGAGATACAT",2,24.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56W G83L G152T R179V",4
"lib2","SARS-CoV-2","AGAGAATGCACGTTCT",7,8.07,NA,NA,NA,NA,NA,NA,"stop","G9Q K56* D68R T85V Q163T",5
"lib2","SARS-CoV-2","AGAGAATTAAGGACTC",11,140.21,10.8,-0.04,0.03,2.92,1.09,0,"1 nonsynonymous","S43G",1
"lib2","SARS-CoV-2","AGAGAATTCACATTTA",8,201.43,9.01,-1.83,0.07,2.41,1.07,0,">1 nonsynonymous","T3A Q176L",2
"lib2","SARS-CoV-2","AGAGAATTTTTAGCCC",4,41.14,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S43V C61K I72W N120M A145L",5
"lib2","SARS-CoV-2","AGAGACAATAACAGGT",2,8.69,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","D90V P96L A105F",3
"lib2","SARS-CoV-2","AGAGACAATTTATCTG",6,60.22,10.05,-0.79,0.07,2.7,1.03,0,">1 nonsynonymous","R27K S69Q Q144S",3
"lib2","SARS-CoV-2","AGAGACACATACATAT",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L G9M S41K K56S C61L Y93P T100S",7
"lib2","SARS-CoV-2","AGAGACAGAGCACAAG",1,11.51,6.85,-3.99,0.61,1.65,1.09,0.05,">1 nonsynonymous","G51D F126I A145F L183T T201K",5
"lib2","SARS-CoV-2","AGAGACATAACCAGAA",7,183.25,10.55,-0.28,0.02,2.93,1.07,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","AGAGACATAATAGTCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L C150L G172V",3
"lib2","SARS-CoV-2","AGAGACATATAAAATT",1,10.8,6.52,-4.31,0.32,1.73,1.25,0.02,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","AGAGACCAAATAATAA",2,5.02,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","K132Y P149K P177Q",3
"lib2","SARS-CoV-2","AGAGACCACCAAAGAA",5,23.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49N T55E N64M F160S",4
"lib2","SARS-CoV-2","AGAGACCATATGCATA",1,0.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101I",1
"lib2","SARS-CoV-2","AGAGACCCAAAATTGT",1,7.35,10.7,-0.14,0.02,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAGACCTACAAGCTT",4,37.28,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K48M T55I I72A V77A P161A",5
"lib2","SARS-CoV-2","AGAGACCTGACATAAA",1,27.85,10.17,-0.66,0.06,2.88,1.06,0,">1 nonsynonymous","G51H F156Y",2
"lib2","SARS-CoV-2","AGAGACCTTTTACCGT",1,39.34,8.56,-2.28,0.07,2.92,1.07,0,">1 nonsynonymous","F44L T55V K87Y G166R",4
"lib2","SARS-CoV-2","AGAGACGAAAAAAAAT",5,104.95,10.29,-0.54,0.04,2.79,1.05,0,"1 nonsynonymous","S45F",1
"lib2","SARS-CoV-2","AGAGACGAATCAGAGA",2,26.04,10.7,-0.14,0.06,3,1.01,0,"1 nonsynonymous","Y39C",1
"lib2","SARS-CoV-2","AGAGACGACGAACCTA",1,42.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36G A42P P96R G155C G166S",5
"lib2","SARS-CoV-2","AGAGACGATCAATGCG",7,61.55,9.13,-1.71,0.05,2.81,1.11,0,">1 nonsynonymous","N130W N157D",2
"lib2","SARS-CoV-2","AGAGACGCAAAAAGCC",1,46.29,10.8,-0.04,0.07,2.97,1.02,0,">1 nonsynonymous","N4L S43I Q168Y",3
"lib2","SARS-CoV-2","AGAGACGTTTCCAGCA",1,19.24,10.25,-0.58,0.06,2.85,1,0,">1 nonsynonymous","V37R N130A P161S",3
"lib2","SARS-CoV-2","AGAGACTAAAATTAAT",3,29.13,8.65,-2.19,0.23,1.5,1.06,0.02,"1 nonsynonymous","I28P",1
"lib2","SARS-CoV-2","AGAGACTACACCTAAT",7,84.85,9.18,-1.65,0.09,1.64,1.12,0,">1 nonsynonymous","I2V R27S C49V",3
"lib2","SARS-CoV-2","AGAGACTCACAATGGT",7,84.57,10.72,-0.12,0.03,2.94,1.07,0,"1 nonsynonymous","Q84C",1
"lib2","SARS-CoV-2","AGAGACTCCGAAATGA",21,2.87,NA,NA,NA,NA,NA,NA,"stop","N40* A105E D112P S139T",4
"lib2","SARS-CoV-2","AGAGACTGAAACATAT",6,25.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A105E Y119T",2
"lib2","SARS-CoV-2","AGAGACTGGACTATTG",12,198.91,8.45,-2.39,0.12,1.8,1.11,0,">1 nonsynonymous","T15H V37S N120D Q176K",4
"lib2","SARS-CoV-2","AGAGAGAAGACAATCT",6,121.41,9.8,-1.04,0.04,1.97,1.05,0,">1 nonsynonymous","G51A N64R S184A K198S",4
"lib2","SARS-CoV-2","AGAGAGAAGCTGGCAT",3,10.99,6,-4.84,1.63,3,1.14,0.01,">1 nonsynonymous","D34R G101C N157Y",3
"lib2","SARS-CoV-2","AGAGAGAGGCACTAAG",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M W106D Q168A",3
"lib2","SARS-CoV-2","AGAGAGCAAACTACTT",3,24.91,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R27G S41D S45K N58E Y91G F167S",6
"lib2","SARS-CoV-2","AGAGAGCAAGGCAAAC",8,0.21,NA,NA,NA,NA,NA,NA,"stop","Y35R V103* Y143V",3
"lib2","SARS-CoV-2","AGAGAGCCTAAACGAG",3,46.39,6.87,-3.96,0.44,1.5,1.2,0.05,">1 nonsynonymous","V71P C158T",2
"lib2","SARS-CoV-2","AGAGAGCCTGGTCACT",2,13.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V153M R179M",2
"lib2","SARS-CoV-2","AGAGAGCTAAACAAGA",1,76.24,9.09,-1.75,0.09,2.73,1.03,0,">1 nonsynonymous","T55N Y143T",2
"lib2","SARS-CoV-2","AGAGAGCTGCGCCAAT",1,21.88,10.86,0.02,0.08,2.92,1.05,0,"1 nonsynonymous","D98K",1
"lib2","SARS-CoV-2","AGAGAGGAAGAAACTA",4,49.79,6.93,-3.9,0.22,1.5,1.1,0.01,">1 nonsynonymous","S41V G51N N157P",3
"lib2","SARS-CoV-2","AGAGAGGACCGACATC",1,51.39,10.42,-0.42,0.07,2.83,1.01,0,">1 nonsynonymous","S29T Q176N",2
"lib2","SARS-CoV-2","AGAGAGGACTTCCCCT",6,38.82,9.62,-1.21,0.07,1.99,1.03,0,">1 nonsynonymous","N13S V37Y K56F G152N",4
"lib2","SARS-CoV-2","AGAGAGGCAAGGAAGG",3,26.99,8.46,-2.37,0.15,2.24,1.05,0.01,">1 nonsynonymous","E10N N130T A145P",3
"lib2","SARS-CoV-2","AGAGAGGTAAAATGAA",4,46.37,10.61,-0.22,0.09,2.83,1.07,0,">1 nonsynonymous","A14E P197Q",2
"lib2","SARS-CoV-2","AGAGAGGTGCCCCCAA",6,23.22,6.79,-4.04,0.25,1.5,1.05,0.01,">1 nonsynonymous","T3R E76P Y119R",3
"lib2","SARS-CoV-2","AGAGAGTGTTGAATGA",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60N V65N D90S G117R V181S",5
"lib2","SARS-CoV-2","AGAGAGTTCGAACAAA",5,149.92,10.74,-0.09,0.02,2.88,1.11,0,"1 nonsynonymous","K128M",1
"lib2","SARS-CoV-2","AGAGAGTTTAAGAGTG",7,112.9,10.88,0.05,0.04,2.94,1.07,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","AGAGATAAAACAAATA",6,49.44,8.67,-2.16,0.07,2.98,1.12,0,">1 nonsynonymous","T15P S36D K87T Q168I",4
"lib2","SARS-CoV-2","AGAGATAAACCCTACG",18,192.86,9.08,-1.76,0.05,2.01,1.09,0,">1 nonsynonymous","Y91M N107S",2
"lib2","SARS-CoV-2","AGAGATAAGAATAAAT",3,14.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S D98S W106R D112T F156H",5
"lib2","SARS-CoV-2","AGAGATAATGCTCAAA",10,131.52,10.77,-0.06,0.04,2.94,1.08,0,">1 nonsynonymous","I2D N64E",2
"lib2","SARS-CoV-2","AGAGATACTTTAACAG",7,1.12,NA,NA,NA,NA,NA,NA,"stop","A14* C102V",2
"lib2","SARS-CoV-2","AGAGATAGATTCCGAA",2,28.97,6,-4.84,1.95,1.5,1.27,0.03,">1 nonsynonymous","E10N A18T G83A K94L",4
"lib2","SARS-CoV-2","AGAGATAGGAGAAGAA",5,34.02,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K87C L122P Y143E",3
"lib2","SARS-CoV-2","AGAGATAGGATGAGAT",4,16.65,9.36,-1.47,0.08,2.77,1.14,0,">1 nonsynonymous","K56T I142K",2
"lib2","SARS-CoV-2","AGAGATATGAATAAAA",4,28.91,9.14,-1.7,0.13,1.68,1.12,0.01,">1 nonsynonymous","V11N S184C",2
"lib2","SARS-CoV-2","AGAGATATTAAGCAAC",12,146.67,9.76,-1.08,0.08,2.16,1.11,0,">1 nonsynonymous","D90T G152L",2
"lib2","SARS-CoV-2","AGAGATATTTAAGGAC",4,17.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83Y Y93L W106S",3
"lib2","SARS-CoV-2","AGAGATCAAACTATAA",11,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","AGAGATCAAATACTCG",9,186.65,10.57,-0.26,0.02,2.94,1.06,0,"1 nonsynonymous","K128W",1
"lib2","SARS-CoV-2","AGAGATCAACATAATC",4,32.03,9.85,-0.98,0.11,2.23,1.04,0,">1 nonsynonymous","A14C T55I E141V L188V",4
"lib2","SARS-CoV-2","AGAGATCACATATAGG",5,12.71,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F8L I88R L131K",3
"lib2","SARS-CoV-2","AGAGATCACGACACGC",11,75.29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1R F12L R25D Y119W N151A",5
"lib2","SARS-CoV-2","AGAGATCAGTTAACTA",2,7.19,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","R25E G101E",2
"lib2","SARS-CoV-2","AGAGATCCGATTTAAT",14,196.68,10,-0.83,0.04,2.63,1.02,0,">1 nonsynonymous","N24I N64A D90L",3
"lib2","SARS-CoV-2","AGAGATCCTTAGATAT",6,60.7,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A18T R124D R136W",3
"lib2","SARS-CoV-2","AGAGATCCTTGCAGCC",16,137.25,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A14S R73Q G117V K128E N157I",5
"lib2","SARS-CoV-2","AGAGATCTCACCTTAG",9,181.95,10.52,-0.32,0.05,2.96,1.03,0,"1 nonsynonymous","K87L",1
"lib2","SARS-CoV-2","AGAGATCTTACCGAAC",6,4.99,NA,NA,NA,NA,NA,NA,"stop","N13P Y50* N120H",3
"lib2","SARS-CoV-2","AGAGATGACGTAACTT",5,16.92,9.11,-1.73,0.2,1.8,1.12,0.01,">1 nonsynonymous","K94F K114L",2
"lib2","SARS-CoV-2","AGAGATGACTTTACAA",3,67.96,9.74,-1.09,0.07,2.75,1.04,0,">1 nonsynonymous","A67V N120Q V173P",3
"lib2","SARS-CoV-2","AGAGATGCCTGATAAG",3,24.92,9.66,-1.17,0.17,1.94,1.09,0.01,">1 nonsynonymous","C61W P96T",2
"lib2","SARS-CoV-2","AGAGATGTAAGATATT",1,7.09,7.1,-3.73,0.28,1.91,1.06,0.02,">1 nonsynonymous","N1S G86L",2
"lib2","SARS-CoV-2","AGAGATGTATACCCGT",2,43.59,9.19,-1.64,0.09,2.81,1.07,0,">1 nonsynonymous","A145N P149H",2
"lib2","SARS-CoV-2","AGAGATTAAGCTAAAC",16,197.5,10.66,-0.18,0.04,2.93,1.07,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AGAGATTAGGCAAAAG",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S F17E V182A",3
"lib2","SARS-CoV-2","AGAGATTATATAGAAA",1,53.09,6.33,-4.5,0.42,1.5,1.13,0.01,">1 nonsynonymous","V20W S43R Y91L",3
"lib2","SARS-CoV-2","AGAGATTATGCTCATA",10,268.49,10.73,-0.11,0.03,2.89,1.1,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","AGAGATTATTCCACAA",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T A81S S113V Y123N",4
"lib2","SARS-CoV-2","AGAGATTCCAGTTACG",1,6.6,10.56,-0.28,0.12,2.9,1.04,0,">1 nonsynonymous","L122Q F134S",2
"lib2","SARS-CoV-2","AGAGATTTAAAAGCCT",1,17.72,9.22,-1.61,0.09,2.87,1.05,0,">1 nonsynonymous","K26R C61L N107E",3
"lib2","SARS-CoV-2","AGAGATTTAAACTACA",7,56.59,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Y93L G146L A190D",3
"lib2","SARS-CoV-2","AGAGATTTGATTCTGG",7,35.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36F A42K D90T F99S L188K",5
"lib2","SARS-CoV-2","AGAGCAAATCCTGCGT",4,95.7,10.67,-0.16,0.04,2.93,1.07,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","AGAGCAAATCGAATCA",12,57.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24V G101Y",2
"lib2","SARS-CoV-2","AGAGCAACCGACGCAA",9,130.62,10.5,-0.34,0.03,2.94,1.05,0,">1 nonsynonymous","F12M I104L",2
"lib2","SARS-CoV-2","AGAGCAATAGGAGGAC",14,1.86,NA,NA,NA,NA,NA,NA,"stop","S36P S41Y W106R G116*",4
"lib2","SARS-CoV-2","AGAGCAATATTAAGTA",6,0.84,NA,NA,NA,NA,NA,NA,"stop","Y39N L95T K128*",3
"lib2","SARS-CoV-2","AGAGCAATTCTTTCGG",3,32,10.91,0.08,0.06,2.94,1.08,0,"1 nonsynonymous","I2R",1
"lib2","SARS-CoV-2","AGAGCAATTGATTCTA",1,69.8,10.9,0.06,0.05,2.97,1.04,0,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","AGAGCACATTCGAAGC",2,7.18,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F8A C49R P149T",3
"lib2","SARS-CoV-2","AGAGCACCACTACCAT",9,108.65,9.95,-0.88,0.09,2.21,1.03,0,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","AGAGCACGCGGACGTC",2,12.71,6.8,-4.04,0.32,1.5,1.07,0.05,">1 nonsynonymous","F47R C158A",2
"lib2","SARS-CoV-2","AGAGCACTTAATATGA",3,71.45,10.89,0.06,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGCAGACAGGCATA",3,65.87,10.78,-0.06,0.05,2.93,1.07,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","AGAGCAGATAATTAGA",1,13.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33G N40S D112N S129A P169G",5
"lib2","SARS-CoV-2","AGAGCAGCTAGAATCC",2,35.43,10.21,-0.62,0.11,2.68,1,0.01,"1 nonsynonymous","K94Q",1
"lib2","SARS-CoV-2","AGAGCAGCTCCGCACG",8,39.11,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K56P Q168M V182E K198G",4
"lib2","SARS-CoV-2","AGAGCATAAAGAATTA",2,147.66,10.78,-0.05,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGCATATAACGTAA",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T C158N F167S",3
"lib2","SARS-CoV-2","AGAGCATATCTTGAGA",2,114.65,10.82,-0.01,0.06,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGCATTCTCAACAC",10,1.39,NA,NA,NA,NA,NA,NA,"stop","N107A K132* G155R",3
"lib2","SARS-CoV-2","AGAGCCAAAAGGAGCA",1,15.38,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T85W W106F G116F G146F",4
"lib2","SARS-CoV-2","AGAGCCAACTCAGGAA",2,25.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2T F62L P82E P96D A145K",5
"lib2","SARS-CoV-2","AGAGCCAATAACCTAG",3,76.93,10.56,-0.28,0.03,2.94,1.02,0,">1 nonsynonymous","N1S T55S F134S",3
"lib2","SARS-CoV-2","AGAGCCACACTAATTA",4,0,NA,NA,NA,NA,NA,NA,"stop","C61V Q84G I88S N120* Y159D",5
"lib2","SARS-CoV-2","AGAGCCACGACTAAAA",5,72.73,9.55,-1.29,0.12,2.22,1.06,0,">1 nonsynonymous","G86S E141D",2
"lib2","SARS-CoV-2","AGAGCCATTGGTCTAA",7,53.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17L C61D V71L I88P S129D T170S L183I T201D",8
"lib2","SARS-CoV-2","AGAGCCATTTTGGATT",18,332.83,10.85,0.02,0.04,2.9,1.11,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","AGAGCCCCTATACAAA",5,35.63,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Y91H F134S N151I S164W",4
"lib2","SARS-CoV-2","AGAGCCCTTATAATTG",6,108.86,10.59,-0.25,0.04,3,1.01,0,">1 nonsynonymous","G9S S29R P169T",3
"lib2","SARS-CoV-2","AGAGCCGAGCCGTAAC",17,221.77,9.86,-0.98,0.06,2.14,1.01,0,">1 nonsynonymous","L131T P149A",2
"lib2","SARS-CoV-2","AGAGCCGTTGACTTAA",2,36.27,10.66,-0.18,0.05,2.92,1.08,0,">1 nonsynonymous","P7S V11I S147N P169I",4
"lib2","SARS-CoV-2","AGAGCCTCAATTGTCA",3,3.13,NA,NA,NA,NA,NA,NA,"stop","S139D S147*",2
"lib2","SARS-CoV-2","AGAGCGAATGCAAAAT",11,107.74,10.82,-0.01,0.05,2.93,1.09,0,">1 nonsynonymous","S113A T201S",2
"lib2","SARS-CoV-2","AGAGCGAGCTGTCGCG",3,120.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86L G116V",2
"lib2","SARS-CoV-2","AGAGCGAGGGCGCAAA",11,266.48,9.37,-1.47,0.04,2.95,1.07,0,">1 nonsynonymous","I28L F126Y",2
"lib2","SARS-CoV-2","AGAGCGAGTGCAGCCA",2,29.77,10.01,-0.83,0.14,2.22,1.07,0.01,">1 nonsynonymous","S53P G83V",2
"lib2","SARS-CoV-2","AGAGCGATAAAAAAAA",2,13.79,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A89M P149R E186I",3
"lib2","SARS-CoV-2","AGAGCGCAGAATCTAT",8,102.97,10.82,-0.02,0.07,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGCGCCAGCTGTCG",3,99.08,6.4,-4.44,0.33,1.5,1.1,0.01,">1 nonsynonymous","Y35V W106M L122Y Y175R",4
"lib2","SARS-CoV-2","AGAGCGCGATGCGGTA",5,47.63,9.46,-1.38,0.08,1.76,1.1,0,">1 nonsynonymous","V103M K128P F134Y E154P",4
"lib2","SARS-CoV-2","AGAGCGCTTACTTAAC",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K F47A",2
"lib2","SARS-CoV-2","AGAGCGGACCCATATT",7,68.83,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D34Q F47K R136S F167G",4
"lib2","SARS-CoV-2","AGAGCGGGAATGTCAC",4,6.99,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","L5P E10A V20H V37N G74S E141P N157W G196D",8
"lib2","SARS-CoV-2","AGAGCGGTATCGCGTT",8,55.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4Y D59S W106L N118Y T170A",5
"lib2","SARS-CoV-2","AGAGCGTATACAAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* A14R P54Q P82N",4
"lib2","SARS-CoV-2","AGAGCGTTCCTCAGAC",11,109.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14F I80K Y175L",3
"lib2","SARS-CoV-2","AGAGCTAAACTATGCA",2,13.84,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D112A N157S",2
"lib2","SARS-CoV-2","AGAGCTAATGAAGTAA",2,45.1,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","K56F Y121E F167R",3
"lib2","SARS-CoV-2","AGAGCTATACGAATAG",4,25.94,8.82,-2.02,0.21,1.5,1.1,0.02,">1 nonsynonymous","F8G L60V E154M",3
"lib2","SARS-CoV-2","AGAGCTATTTGAGGAG",2,9.43,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","A14D C49V I104C P149M",4
"lib2","SARS-CoV-2","AGAGCTCAATAATTTT",6,56.15,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37R A42T N64E G101L",4
"lib2","SARS-CoV-2","AGAGCTCCAACAGATC",6,25.1,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","F44N P82N L183T",3
"lib2","SARS-CoV-2","AGAGCTCGCATTAGTT",6,95.18,10.69,-0.14,0.02,2.98,1.03,0,">1 nonsynonymous","I104V E141H K199H",3
"lib2","SARS-CoV-2","AGAGCTCTACAGAGCA",4,25.79,6,-4.84,0.54,1.5,1.02,0,">1 nonsynonymous","G86W L122N",2
"lib2","SARS-CoV-2","AGAGCTGAAATCCTTG",3,73.06,10.76,-0.07,0.04,2.99,1.04,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","AGAGCTGATTTAGCAA",14,178.64,8.37,-2.46,0.11,2.49,1.04,0,">1 nonsynonymous","K87S I138P A145T",3
"lib2","SARS-CoV-2","AGAGCTGCAAGATTTT",5,81.18,9.72,-1.11,0.06,2.38,1.09,0,">1 nonsynonymous","S41P S69T N120F",3
"lib2","SARS-CoV-2","AGAGCTGGATTGCTTA",3,16.44,10.91,0.07,0.08,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGCTGTAACTGCCC",5,108.22,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F47Y G86D Y175K",3
"lib2","SARS-CoV-2","AGAGCTGTAGACTATC",2,31.14,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N58L L162G",2
"lib2","SARS-CoV-2","AGAGCTTAATGCCGCT",22,1149.25,10.64,-0.2,0.02,2.96,1.04,0,">1 nonsynonymous","G9S S41K N120G K198R",4
"lib2","SARS-CoV-2","AGAGCTTACATACCCC",4,107.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y123T Y175G A190P",3
"lib2","SARS-CoV-2","AGAGCTTACGTAACCC",11,92.37,6.09,-4.75,1.02,1.5,1.15,0.03,">1 nonsynonymous","F12W K48Q T55D I80K G117P F134R",6
"lib2","SARS-CoV-2","AGAGCTTGACAGGGAG",15,129.61,10.83,0,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGGAAACAAGCAAA",1,0.43,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib2","SARS-CoV-2","AGAGGAAAGAGTGCAT",3,33.42,10.79,-0.05,0.05,2.96,1.08,0,"1 nonsynonymous","L131V",1
"lib2","SARS-CoV-2","AGAGGAACGCTCAATG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","K94* N109F S139*",3
"lib2","SARS-CoV-2","AGAGGAACGGCGTAAA",2,1.57,NA,NA,NA,NA,NA,NA,"stop","E76S V103L S113N K132*",4
"lib2","SARS-CoV-2","AGAGGAAGACAATGAT",2,15.43,6.2,-4.63,0.58,3,1.1,0.01,">1 nonsynonymous","Y21L Q79P F160E",3
"lib2","SARS-CoV-2","AGAGGAAGTAAATGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","AGAGGAATCCCAGTCC",1,17.44,9.43,-1.4,0.1,2.84,1.08,0,">1 nonsynonymous","G9F R73A",2
"lib2","SARS-CoV-2","AGAGGACAACAGCGCA",3,4.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGAGGACCCCACCGAA",3,31.6,10.71,-0.13,0.06,2.98,1.05,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","AGAGGACTGGACAAAA",7,140.96,8.47,-2.36,0.13,2.94,1.06,0.01,"1 nonsynonymous","Y175M",1
"lib2","SARS-CoV-2","AGAGGAGACAGCTTGC",6,19.46,10.99,0.15,0.06,3,1.03,0,">1 nonsynonymous","P54K Q163L",2
"lib2","SARS-CoV-2","AGAGGAGAGACCAAGT",3,6.23,NA,NA,NA,NA,NA,NA,"stop","S36I P54T A105*",3
"lib2","SARS-CoV-2","AGAGGAGTACACCGAA",1,13.42,9.89,-0.94,0.17,2.54,1.09,0.01,">1 nonsynonymous","W106R I138L V153S K198Y",4
"lib2","SARS-CoV-2","AGAGGAGTCAATTAGA",12,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G F62L D98G R136Y G152N F185N G196K",7
"lib2","SARS-CoV-2","AGAGGATACAATGATT",13,43.25,6,-4.84,1.96,1.5,1.14,0.01,">1 nonsynonymous","P7F L60I C61F L95A E141P T201I",6
"lib2","SARS-CoV-2","AGAGGATCCACGCTAC",6,68.99,10.68,-0.16,0.03,2.99,1.02,0,"1 nonsynonymous","Q144G",1
"lib2","SARS-CoV-2","AGAGGATGACCTACAA",5,55.14,6.8,-4.04,0.21,1.5,1.12,0.01,">1 nonsynonymous","A18K N40R S113H G152K",4
"lib2","SARS-CoV-2","AGAGGATGAGTTATAA",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N D90R F99N R127E R136C",5
"lib2","SARS-CoV-2","AGAGGATGCATCGGGC",3,17.04,7.35,-3.49,0.34,1.58,1.11,0.02,">1 nonsynonymous","L5K R78M G83K D137V F156H",5
"lib2","SARS-CoV-2","AGAGGATGCGGCTGTT",7,35.55,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N30R C61L P82L Y91K D97I F134S Y159S",7
"lib2","SARS-CoV-2","AGAGGCACAGAGAGGC",2,25.9,10.62,-0.22,0.06,3,1.01,0,">1 nonsynonymous","I2N F44D",2
"lib2","SARS-CoV-2","AGAGGCACTCCAAAAA",1,11.85,10.86,0.02,0.08,2.97,1.07,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","AGAGGCAGCTCCAAAA",8,1.83,NA,NA,NA,NA,NA,NA,"stop","T63* R127L C158R",3
"lib2","SARS-CoV-2","AGAGGCATAATTGAAA",1,36.08,8.03,-2.8,0.14,2.58,1.01,0.01,">1 nonsynonymous","F12L R73S F156G",3
"lib2","SARS-CoV-2","AGAGGCGAATATAACA",33,254.99,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N4I V37A F99S E135T P149V",5
"lib2","SARS-CoV-2","AGAGGCGACATTTCCT",5,33.34,6.67,-4.16,0.84,1.5,1.24,0.07,">1 nonsynonymous","Y93A R127N E135L",3
"lib2","SARS-CoV-2","AGAGGCGCAAGCTGAT",2,0.63,NA,NA,NA,NA,NA,NA,"stop","V11R F44L G86V W106*",4
"lib2","SARS-CoV-2","AGAGGGACACCTTACT",2,43.88,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y66D Y143R",2
"lib2","SARS-CoV-2","AGAGGGACACGAAACC",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L S45A A105P Y123V Q144L F156E",6
"lib2","SARS-CoV-2","AGAGGGATAAGAACCC",11,147.35,7.41,-3.42,0.18,1.5,1.08,0.01,">1 nonsynonymous","N24F G51M G174L",3
"lib2","SARS-CoV-2","AGAGGGATCCTTAAAT",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L D98E",2
"lib2","SARS-CoV-2","AGAGGGATGACACGGC",4,183.51,10.33,-0.5,0.03,2.89,1.05,0,">1 nonsynonymous","E10V D97S",2
"lib2","SARS-CoV-2","AGAGGGCCATTAACAT",12,171.78,10.86,0.02,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGGGCTGTTCCCTG",12,81.08,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F44P C61V K87S C158Y",4
"lib2","SARS-CoV-2","AGAGGGCTTGAAAATT",5,62.29,9.17,-1.66,0.19,1.5,1,0.02,">1 nonsynonymous","S43Y F185D",2
"lib2","SARS-CoV-2","AGAGGGGCCACCTGCC",1,12.94,9.98,-0.85,0.09,2.39,1.04,0,">1 nonsynonymous","D98L Y178V",2
"lib2","SARS-CoV-2","AGAGGGGCCGCCTCAA",4,0.38,NA,NA,NA,NA,NA,NA,"stop","F12I I104S Y165*",3
"lib2","SARS-CoV-2","AGAGGGGCGTACGAGC",7,119.28,9.89,-0.95,0.14,2.18,1.08,0,">1 nonsynonymous","W106R K132L",2
"lib2","SARS-CoV-2","AGAGGGGGCGCGGTAC",2,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V A81D T100S L122R C150Y T201Q",6
"lib2","SARS-CoV-2","AGAGGGGTACGGATAC",8,67.34,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11S V103C Y123K",3
"lib2","SARS-CoV-2","AGAGGGGTTTACTTCA",3,1.29,NA,NA,NA,NA,NA,NA,"stop","T100I F126W Y143* Q168K",4
"lib2","SARS-CoV-2","AGAGGGTAAACTACTT",6,37.32,10.9,0.07,0.05,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AGAGGGTACACTCAAA",8,93.68,10.15,-0.69,0.06,2.77,1.03,0,">1 nonsynonymous","S29V S139N G152K",3
"lib2","SARS-CoV-2","AGAGGGTAGCCAAGAT",1,6.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R D137R G146A A190F",4
"lib2","SARS-CoV-2","AGAGGTAAGAAACAAA",8,195.44,10.82,-0.02,0.06,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGGTAAGGACGAGA",3,7.23,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Y66S P96S Y119L V181A F185T",5
"lib2","SARS-CoV-2","AGAGGTACAATATAGT",2,2.68,NA,NA,NA,NA,NA,NA,"stop","F12* V103K T140K",3
"lib2","SARS-CoV-2","AGAGGTACATAGAATG",3,9.8,9.18,-1.66,0.19,2.12,1.1,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","AGAGGTACATGTAAAC",16,114.19,10.3,-0.54,0.02,2.89,1.03,0,">1 nonsynonymous","N1Y S41I K56T N109V S129Q",5
"lib2","SARS-CoV-2","AGAGGTACGACTGCAA",7,149.16,8.81,-2.03,0.08,1.88,1.11,0,">1 nonsynonymous","I2D A89C G155D Y178N",4
"lib2","SARS-CoV-2","AGAGGTATAAAGTCTT",1,8.69,10,-0.84,0.22,2.67,1.35,0.01,"1 nonsynonymous","V153T",1
"lib2","SARS-CoV-2","AGAGGTATTGACGACA",7,99.77,9.19,-1.64,0.05,2.86,1.11,0,">1 nonsynonymous","S41M Y119A",2
"lib2","SARS-CoV-2","AGAGGTCAAAGCCGTA",5,88.94,10.78,-0.06,0.09,2.86,1.1,0,">1 nonsynonymous","I2P P149R",2
"lib2","SARS-CoV-2","AGAGGTCAATGCCGAA",6,40.25,6,-4.84,2,3,1.06,0,">1 nonsynonymous","V20L D97L Y119W C158I",4
"lib2","SARS-CoV-2","AGAGGTCCCCAACAGG",6,30.62,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9M V52P A89I K114L",4
"lib2","SARS-CoV-2","AGAGGTCCGACACACG",3,14.66,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y93R G101P",2
"lib2","SARS-CoV-2","AGAGGTCGGCAGGCGG",1,5.06,6,-4.84,2,1.5,1.02,0.01,">1 nonsynonymous","R127S L183P",2
"lib2","SARS-CoV-2","AGAGGTCTAACAAAAT",5,35.31,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5V Y66M P96F D98H",4
"lib2","SARS-CoV-2","AGAGGTCTCATTCGCT",2,12.7,10.02,-0.82,0.35,2.52,1.5,0.05,">1 nonsynonymous","S41R Q84I",2
"lib2","SARS-CoV-2","AGAGGTGCACATTAGA",1,27.89,7.6,-3.24,0.25,1.5,1.16,0.02,">1 nonsynonymous","S36R N58R Y123G S129L",4
"lib2","SARS-CoV-2","AGAGGTGCTGCAATAC",6,50.13,10.53,-0.3,0.05,2.85,1.14,0,"1 nonsynonymous","Y66C",1
"lib2","SARS-CoV-2","AGAGGTGTAAAATACA",12,6.19,NA,NA,NA,NA,NA,NA,"stop","K94* K128* N157T Y178N",4
"lib2","SARS-CoV-2","AGAGGTGTGTTTTAAT",7,81.53,6,-4.84,1.98,1.5,1.15,0.01,">1 nonsynonymous","K56N A89N D98S R136E G155Y Q176R",6
"lib2","SARS-CoV-2","AGAGGTTAATCACACC",13,23.71,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","D90P C150E G166L",3
"lib2","SARS-CoV-2","AGAGGTTCAAGTATAT",5,40.06,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F62L I80S A89L K198S",4
"lib2","SARS-CoV-2","AGAGGTTCACGTATGG",8,118.79,9.21,-1.63,0.05,2.85,1.06,0,">1 nonsynonymous","K128N I142S",2
"lib2","SARS-CoV-2","AGAGGTTCATTAGCCA",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M V103N",2
"lib2","SARS-CoV-2","AGAGGTTTAGACGCTG",6,48.62,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9Q R16W N64L W106P Q144S Q163E",6
"lib2","SARS-CoV-2","AGAGGTTTCAACGGCA",17,3.04,NA,NA,NA,NA,NA,NA,"stop","D98* S113Q",2
"lib2","SARS-CoV-2","AGAGTAAAACCACGAT",5,121.3,10.01,-0.82,0.04,2.94,1.07,0,">1 nonsynonymous","K26M Q168T",2
"lib2","SARS-CoV-2","AGAGTAAAGAAAAGGT",2,31.64,6.19,-4.65,0.51,1.5,1.12,0.01,">1 nonsynonymous","G9Y Y35V F47L C61Q L131Q",5
"lib2","SARS-CoV-2","AGAGTAACAACAATAG",3,42.93,9.98,-0.86,0.06,2.84,1.15,0,"1 nonsynonymous","N118T",1
"lib2","SARS-CoV-2","AGAGTAACACCTTTAT",6,17.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R27H G83Y V103R E135L",4
"lib2","SARS-CoV-2","AGAGTAACGAGGTGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90S D97G W106*",3
"lib2","SARS-CoV-2","AGAGTAAGATTGGATT",6,101.93,9.02,-1.81,0.07,2.8,1.07,0,">1 nonsynonymous","L5S G155M G174C T201S",4
"lib2","SARS-CoV-2","AGAGTAAGCAAAAACT",4,48.35,10.53,-0.31,0.04,2.98,1.03,0,">1 nonsynonymous","T46V E141L",2
"lib2","SARS-CoV-2","AGAGTAAGCCATCGAC",5,3.34,NA,NA,NA,NA,NA,NA,"stop","S69* I88* F99Y L122* L183D",5
"lib2","SARS-CoV-2","AGAGTAATAGCTGGCA",9,92.44,10.83,-0.01,0.05,2.92,1.1,0,"1 nonsynonymous","R16K",1
"lib2","SARS-CoV-2","AGAGTAATATAAAAAT",3,52.37,10.61,-0.23,0.05,2.89,1.13,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","AGAGTACAGATTATAA",6,69.18,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","T3L S53R N92M S113K N120Y Y143N A192S K199W",8
"lib2","SARS-CoV-2","AGAGTACAGCTAACAC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","L38* K87C",2
"lib2","SARS-CoV-2","AGAGTACCCTCAGAAG",1,9.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9R F99R N107V Q176H",4
"lib2","SARS-CoV-2","AGAGTACTATAAGCAG",2,7.8,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P82R I88G F156R Y178I",4
"lib2","SARS-CoV-2","AGAGTACTGATAAGAA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F17* Y35I T100P S139R F156A",5
"lib2","SARS-CoV-2","AGAGTACTTAAATTGA",7,60.89,8.05,-2.79,0.27,1.5,1.03,0.03,">1 nonsynonymous","A22E K26G A81G T85Q",4
"lib2","SARS-CoV-2","AGAGTACTTACAGATA",2,26.61,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y39K A81C N110I P133R",4
"lib2","SARS-CoV-2","AGAGTAGACTAACCAG",2,21.05,8.23,-2.6,0.12,2.05,1.05,0,">1 nonsynonymous","D34V F126S",2
"lib2","SARS-CoV-2","AGAGTAGCAAACTGCT",2,0.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","AGAGTAGCGACATTAC",7,29,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L38N W106V S129C",3
"lib2","SARS-CoV-2","AGAGTAGCGTGAATCA",8,182.98,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12P L38K S53L",3
"lib2","SARS-CoV-2","AGAGTAGGTATACTGT",3,19.1,6.13,-4.71,0.6,1.5,1.07,0.01,">1 nonsynonymous","E10L S43A K56L I72D I88G N110D",6
"lib2","SARS-CoV-2","AGAGTATAAAGATCAA",2,51.36,8.75,-2.08,0.1,2.2,1.03,0,">1 nonsynonymous","N13D V37G F44Y G166V",4
"lib2","SARS-CoV-2","AGAGTATAACTAGCTC",1,5.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M I88M T100F",3
"lib2","SARS-CoV-2","AGAGTATGACTATAAT",1,16.58,10.11,-0.73,0.14,2.11,1.38,0.02,">1 nonsynonymous","F12W S53L F160W N171F",4
"lib2","SARS-CoV-2","AGAGTATTTATTCTAG",12,199.75,10.27,-0.57,0.03,2.88,1.04,0,">1 nonsynonymous","V77L A81C",2
"lib2","SARS-CoV-2","AGAGTCACTTATTAAG",2,27.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L95A N107L G152L",3
"lib2","SARS-CoV-2","AGAGTCAGTTCAACGC",4,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T E10W N40S K87F",4
"lib2","SARS-CoV-2","AGAGTCCAAAAATGGG",3,9.48,8.96,-1.88,0.33,1.5,1,0.04,">1 nonsynonymous","G9W P82R K198T",3
"lib2","SARS-CoV-2","AGAGTCCAACTTTTAT",3,114.7,8.9,-1.93,0.05,2.9,1.13,0,">1 nonsynonymous","V37F K56R T85D S164I G174L",5
"lib2","SARS-CoV-2","AGAGTCCACTATCAAT",1,32.92,10.46,-0.37,0.07,2.94,1.05,0,"1 nonsynonymous","F134T",1
"lib2","SARS-CoV-2","AGAGTCCCAATAGACT",6,11.89,6,-4.84,2,2.69,1.07,0.01,">1 nonsynonymous","T15I A33L D59G C158S",4
"lib2","SARS-CoV-2","AGAGTCCCGATTTAAC",3,30.17,10.12,-0.71,0.16,2.69,1.11,0.01,"1 nonsynonymous","K56P",1
"lib2","SARS-CoV-2","AGAGTCCCTTGTAATT",13,90.84,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y93H E141R",2
"lib2","SARS-CoV-2","AGAGTCCGATACGTCC",5,42.17,9.08,-1.76,0.14,1.77,1.1,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","AGAGTCCGCCGATTTG",2,77.16,9.17,-1.67,0.12,2.29,1.08,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","AGAGTCGCTAACGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V65M K114* C150A S200L",4
"lib2","SARS-CoV-2","AGAGTCGGATTCTAGG",2,74.15,8.82,-2.01,0.08,2.77,1.12,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","AGAGTCGGCCCATTAT",6,1.97,NA,NA,NA,NA,NA,NA,"stop","S41F S53M C61W G83Y I88L P96G V173* L183C",8
"lib2","SARS-CoV-2","AGAGTCGTTCCACACA",3,0,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","AGAGTCTAATAGTTAG",3,13.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1T A105L R127T E135P E154V H189Y",6
"lib2","SARS-CoV-2","AGAGTCTATTACTACG",2,8.38,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37C K94I",2
"lib2","SARS-CoV-2","AGAGTCTCTTCAGCTA",5,116.65,9.55,-1.29,0.07,2.3,1.06,0,">1 nonsynonymous","F44C Y121Q",2
"lib2","SARS-CoV-2","AGAGTCTTAGCAAATA",13,116.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T L183Y",2
"lib2","SARS-CoV-2","AGAGTCTTAGCTGAAA",2,31.59,9.55,-1.29,0.09,2.01,1.01,0,">1 nonsynonymous","N4R F47W P96K",3
"lib2","SARS-CoV-2","AGAGTCTTGTCCTAAA",3,19.8,6.53,-4.31,0.46,1.5,1.1,0.03,">1 nonsynonymous","Y123P F134M P149Y",3
"lib2","SARS-CoV-2","AGAGTGAAATTACTAA",12,3.59,NA,NA,NA,NA,NA,NA,"stop","V37L I80L Y159*",3
"lib2","SARS-CoV-2","AGAGTGAACCAAGACA",7,98.77,10.15,-0.69,0.06,2.81,1.03,0,">1 nonsynonymous","V11F A14L",2
"lib2","SARS-CoV-2","AGAGTGACGATATACC",3,15.91,10.46,-0.38,0.15,2.64,1.25,0.01,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","AGAGTGAGCAAGCATG",12,175.63,9.38,-1.46,0.05,2.85,1.05,0,">1 nonsynonymous","N118S C195I",2
"lib2","SARS-CoV-2","AGAGTGAGCTACAATG",4,53.61,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44D A89V N92F P133L",4
"lib2","SARS-CoV-2","AGAGTGAGTGGTCCAT",1,76.37,10.51,-0.32,0.06,2.93,1.07,0,">1 nonsynonymous","S41V I72L",2
"lib2","SARS-CoV-2","AGAGTGAGTTTCCAGC",3,28.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R124F G146M",2
"lib2","SARS-CoV-2","AGAGTGATAAATATTA",4,60.35,10.84,0,0.04,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGTGATGGGCTTGT",6,3.82,NA,NA,NA,NA,NA,NA,"stop","A33* T140D G152Y",3
"lib2","SARS-CoV-2","AGAGTGCACTTGATTT",3,23.5,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","A14S R127P V181H",3
"lib2","SARS-CoV-2","AGAGTGCAGACATATC",1,232.04,10.83,-0.01,0.04,2.95,1.06,0,"1 nonsynonymous","L187Q",1
"lib2","SARS-CoV-2","AGAGTGCCACGTTAAC",1,25.34,8.55,-2.28,0.11,2.69,1.04,0,">1 nonsynonymous","S164I T170Y",2
"lib2","SARS-CoV-2","AGAGTGCGACTCGAAA",9,57.97,6.49,-4.34,0.36,1.5,1.17,0.01,">1 nonsynonymous","F12L Y39L K94G T170N",4
"lib2","SARS-CoV-2","AGAGTGCGTCAAGTAC",4,49.96,8.15,-2.69,0.14,1.56,1.09,0.01,">1 nonsynonymous","C31S D98L N171E",3
"lib2","SARS-CoV-2","AGAGTGCTCCGAGAGC",2,70.4,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y121R F167Q Y175G",3
"lib2","SARS-CoV-2","AGAGTGCTGAAGCACA",9,50.79,8.45,-2.39,0.14,1.91,1.12,0.01,">1 nonsynonymous","L60Q Y165L",2
"lib2","SARS-CoV-2","AGAGTGGCACAGACAG",2,7.52,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13D S43W N92S T140G V182N",5
"lib2","SARS-CoV-2","AGAGTGGCTTACACAT",6,0.61,NA,NA,NA,NA,NA,NA,"stop","L57* G174V",2
"lib2","SARS-CoV-2","AGAGTGGTAAAATACC",4,54.59,9.21,-1.62,0.17,1.77,1.08,0.01,">1 nonsynonymous","F8N P54L",2
"lib2","SARS-CoV-2","AGAGTGTGATCAAAAA",1,24.26,10.24,-0.6,0.08,2.63,1.04,0.01,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AGAGTTAAAACATCAG",4,44.4,8.92,-1.92,0.15,1.84,1.09,0.01,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","AGAGTTAAAGAAGTAT",2,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43N T85S Y119A C158T",4
"lib2","SARS-CoV-2","AGAGTTAATACAAAGA",2,78.81,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37L L95P A145F",3
"lib2","SARS-CoV-2","AGAGTTAATTTGAATT",4,37.45,10.6,-0.24,0.05,2.96,1.06,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","AGAGTTACAGCAAAAA",6,69.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61F F99K N120L T148R",4
"lib2","SARS-CoV-2","AGAGTTACGTAAACGA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S A14I V115M S129C",4
"lib2","SARS-CoV-2","AGAGTTACTATCAGCT",10,80.07,9.84,-1,0.08,2.1,1.04,0,">1 nonsynonymous","G51C K56M D97M",3
"lib2","SARS-CoV-2","AGAGTTAGAAGCGTAT",3,0.92,NA,NA,NA,NA,NA,NA,"stop","D98* Q163R K199N",3
"lib2","SARS-CoV-2","AGAGTTAGAGGTTGCC",2,57.52,10.87,0.03,0.08,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGAGTTATAATATCAG",8,76.71,10.43,-0.4,0.06,2.87,1.04,0,">1 nonsynonymous","S43I T140Y P149I",3
"lib2","SARS-CoV-2","AGAGTTCACTGACTCA",5,32.43,7.2,-3.63,0.37,1.5,1.18,0.03,">1 nonsynonymous","C6A V65K T201L",3
"lib2","SARS-CoV-2","AGAGTTCATCTTATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54A A105Y",2
"lib2","SARS-CoV-2","AGAGTTCCAACATTTA",4,25.04,6.25,-4.59,0.61,1.5,1.14,0.02,">1 nonsynonymous","S69E L125R",2
"lib2","SARS-CoV-2","AGAGTTCCGGCTGAAT",2,33.41,7.94,-2.9,0.16,2.45,1.12,0.01,">1 nonsynonymous","G83S N157F",2
"lib2","SARS-CoV-2","AGAGTTCCTGTCCATA",13,213.47,8.2,-2.64,0.11,2.12,1.09,0,">1 nonsynonymous","A18C N40E G166Y",3
"lib2","SARS-CoV-2","AGAGTTCTCACGGTCT",6,53.22,9.93,-0.91,0.12,2.51,1.06,0.01,">1 nonsynonymous","N64K P133N",2
"lib2","SARS-CoV-2","AGAGTTCTCTATTCTC",1,20.27,8.62,-2.22,0.26,1.54,1.1,0.03,">1 nonsynonymous","N4T I88Q",2
"lib2","SARS-CoV-2","AGAGTTCTGACATCCT",3,31.58,10.29,-0.55,0.07,2.76,1.13,0,">1 nonsynonymous","E10Q T55S D98K S108G L187Q P197I",6
"lib2","SARS-CoV-2","AGAGTTCTTTTGAAGA",5,93.64,10.3,-0.54,0.06,2.84,1.06,0,">1 nonsynonymous","A81G T100N",2
"lib2","SARS-CoV-2","AGAGTTGGAACAGAGT",14,196.54,8.7,-2.14,0.1,1.61,1.1,0,">1 nonsynonymous","K56R Y91T A145G",3
"lib2","SARS-CoV-2","AGAGTTGGCATATTCG",8,96.21,10.17,-0.67,0.07,2.75,1.04,0,">1 nonsynonymous","P54R S69R",2
"lib2","SARS-CoV-2","AGAGTTGGGCTACGCT",1,12.87,9.5,-1.33,0.18,1.73,1.05,0.01,">1 nonsynonymous","N4R R16N I88M G146A",4
"lib2","SARS-CoV-2","AGAGTTGTACATTCAT",1,19.68,9.41,-1.42,0.12,1.66,1.17,0.01,">1 nonsynonymous","C6V R27K S45L A190T",4
"lib2","SARS-CoV-2","AGAGTTGTTCACTTAC",10,3.08,NA,NA,NA,NA,NA,NA,"stop","L162R P177* L187T",3
"lib2","SARS-CoV-2","AGAGTTTATTGAAATC",1,8.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22E S45G N64Q G74K G86T N110Y F160D",7
"lib2","SARS-CoV-2","AGAGTTTCCCGAGTAA",5,90.2,10.63,-0.21,0.03,2.97,1.03,0,">1 nonsynonymous","G83C Y91F Q144S",3
"lib2","SARS-CoV-2","AGAGTTTTGCAAAACC",6,59.58,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N40V G117A Y175N",3
"lib2","SARS-CoV-2","AGATAAAAACCCGATG",2,69.8,9.79,-1.05,0.09,2.12,1.08,0,">1 nonsynonymous","L57W P133W",2
"lib2","SARS-CoV-2","AGATAAAAAGCGCGAA",10,48.89,10.3,-0.54,0.07,2.66,1.11,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","AGATAAAACACATTGC",3,10.82,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F99N L122S S139D C158Y",4
"lib2","SARS-CoV-2","AGATAAAACGCAGCCG",4,23.51,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68K D98P R136M",3
"lib2","SARS-CoV-2","AGATAAAACTCAATTA",2,20.22,10.71,-0.12,0.06,2.85,1.09,0,">1 nonsynonymous","R27P N110G",2
"lib2","SARS-CoV-2","AGATAAAAGAATACGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R V71L G83D A190T",4
"lib2","SARS-CoV-2","AGATAAAAGCAACGAC",2,9.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15H R25L E154W P161K",4
"lib2","SARS-CoV-2","AGATAAACATATAATG",2,25.03,9.7,-1.13,0.12,2.02,1.16,0.01,">1 nonsynonymous","V32L I104S",2
"lib2","SARS-CoV-2","AGATAAACCGACTGAC",3,16.68,8.1,-2.73,0.22,1.5,1,0.03,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","AGATAAACCGTGTGAA",8,2.21,NA,NA,NA,NA,NA,NA,"stop","N40T V77* A89*",3
"lib2","SARS-CoV-2","AGATAAACCTAAGTAG",6,6.67,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3A N24C V103N",3
"lib2","SARS-CoV-2","AGATAAACCTGATTAA",7,161.61,10.22,-0.62,0.04,2.81,1.06,0,">1 nonsynonymous","S45K N130C T140Q",3
"lib2","SARS-CoV-2","AGATAAACGAATAGGT",11,8,NA,NA,NA,NA,NA,NA,"stop","S41M A105* S113F G174Q S184Q A190L",6
"lib2","SARS-CoV-2","AGATAAACTTCCTACA",1,48.72,8.61,-2.22,0.11,1.85,1.06,0.01,">1 nonsynonymous","T15M Y121V K198I",3
"lib2","SARS-CoV-2","AGATAAAGCCTGTCCG",8,173.29,8.55,-2.29,0.1,2.99,1.09,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","AGATAAAGGAACGCAG",3,19.86,10.45,-0.39,0.09,2.81,1.06,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","AGATAAATGATAAGGA",7,85.21,10.81,-0.02,0.03,2.98,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATAACAAGGGATCT",2,7.98,6.01,-4.83,0.82,3,1.08,0.01,">1 nonsynonymous","N1Q W106G Y121T T140C P149T",5
"lib2","SARS-CoV-2","AGATAACAAGTCACAA",21,153.19,9.86,-0.98,0.08,2.26,1.08,0,">1 nonsynonymous","T55L L162T",2
"lib2","SARS-CoV-2","AGATAACAGAACTAAA",1,10.63,9.07,-1.77,0.19,1.72,1.17,0.01,">1 nonsynonymous","C6V F12G",2
"lib2","SARS-CoV-2","AGATAACAGATTTAGC",15,8.32,NA,NA,NA,NA,NA,NA,"stop","A22* D90L",2
"lib2","SARS-CoV-2","AGATAACATATATAAT",3,22.28,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I28R V181S",2
"lib2","SARS-CoV-2","AGATAACATGATCAGG",13,255.82,10,-0.83,0.05,2.87,1.05,0,">1 nonsynonymous","G9V K87R K114T E186T",4
"lib2","SARS-CoV-2","AGATAACCCGGTAGGG",2,29.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E10F A33C V52T I80E A89V T148N",6
"lib2","SARS-CoV-2","AGATAACCGTACGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70I E141P",2
"lib2","SARS-CoV-2","AGATAACGACGTATTA",2,8.1,10.72,-0.12,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATAACGCGGCTAAT",3,28.09,10.09,-0.75,0.08,2.83,1.12,0,">1 nonsynonymous","T85M G174L",2
"lib2","SARS-CoV-2","AGATAACGTACCAGAG",3,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83H E141K T148L Q168S",4
"lib2","SARS-CoV-2","AGATAACTAAACAACC",2,16.79,9.47,-1.36,0.11,2.82,1.05,0.01,">1 nonsynonymous","F44L S129R T170F",3
"lib2","SARS-CoV-2","AGATAACTATCAAATT",1,7.48,10.9,0.07,0.12,3,1,0,"1 nonsynonymous","K56H",1
"lib2","SARS-CoV-2","AGATAACTATTTAAAT",15,1.01,NA,NA,NA,NA,NA,NA,"stop","T15R S36* G101S V103M G117A P177T A190L",7
"lib2","SARS-CoV-2","AGATAACTCGCTGACG",10,76.79,10.34,-0.49,0.05,2.8,1.1,0,">1 nonsynonymous","T15G N30H",2
"lib2","SARS-CoV-2","AGATAACTTAGCTCAA",4,32.27,10.42,-0.42,0.04,2.87,1.12,0,">1 nonsynonymous","T3A A42H L60A T148F",4
"lib2","SARS-CoV-2","AGATAAGAACCGACTG",6,70.82,6,-4.84,1.42,1.5,1.14,0.01,">1 nonsynonymous","Y39S G86K T170S V181N",4
"lib2","SARS-CoV-2","AGATAAGAAGAAAAAT",14,106.21,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25Q V37M P82Q Y119L V153N",5
"lib2","SARS-CoV-2","AGATAAGACGTCATTG",11,114.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43V F167N",2
"lib2","SARS-CoV-2","AGATAAGATTCCGATA",7,62.19,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","AGATAAGATTTACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L R78S L95C G116Y E154Y",5
"lib2","SARS-CoV-2","AGATAAGCACCGGCCG",1,113.53,9.9,-0.94,0.08,2.26,1.01,0,">1 nonsynonymous","C61S A81L",2
"lib2","SARS-CoV-2","AGATAAGGTAACGAGT",18,18.92,NA,NA,NA,NA,NA,NA,"stop","V11R K26Q K128*",3
"lib2","SARS-CoV-2","AGATAAGTAAAAAATC",2,18.45,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","W23E Y93R",2
"lib2","SARS-CoV-2","AGATAAGTAAACCGTG",5,12.23,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C6N A81P S139L",3
"lib2","SARS-CoV-2","AGATAAGTTGCTGGAG",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F C49W A105L",3
"lib2","SARS-CoV-2","AGATAATAAAACGCCA",10,175.91,9.51,-1.33,0.09,2.3,1.02,0,">1 nonsynonymous","F8M Q144L",2
"lib2","SARS-CoV-2","AGATAATAAAAGCAGT",5,20.06,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C6L G83I A105Q N120D P133M T148R",6
"lib2","SARS-CoV-2","AGATAATAAAGGGACA",5,44.88,10.84,0,0.06,3,1.03,0,">1 nonsynonymous","V115N L122A",2
"lib2","SARS-CoV-2","AGATAATAACCACACT",1,6.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92S W106L Q168R",3
"lib2","SARS-CoV-2","AGATAATAAGAACCAA",9,55.21,8.69,-2.14,0.14,1.51,1.1,0.01,">1 nonsynonymous","G83C S139I P149L",3
"lib2","SARS-CoV-2","AGATAATACTTCGCAG",1,0.56,NA,NA,NA,NA,NA,NA,"stop","N24F T55V D98*",3
"lib2","SARS-CoV-2","AGATAATATAAGGTGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K N120K S139G G152S Y165L",5
"lib2","SARS-CoV-2","AGATAATATCCAATCC",9,42.72,6,-4.84,2,3,1.09,0,">1 nonsynonymous","S41Y F62M N120L S147D C158L",5
"lib2","SARS-CoV-2","AGATAATATCTTTGGG",5,72.82,8.37,-2.47,0.11,2.81,1.07,0,">1 nonsynonymous","G51T Y159M P197T",3
"lib2","SARS-CoV-2","AGATAATATGCGGATT",2,56.06,10.73,-0.11,0.04,3,1.02,0,">1 nonsynonymous","T85V S129V",2
"lib2","SARS-CoV-2","AGATAATCAAATATAA",1,5.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14F R25W T55W D98F Q144R",5
"lib2","SARS-CoV-2","AGATAATCATAAACAT",4,13.1,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G86V T100C C158G",3
"lib2","SARS-CoV-2","AGATAATGAAAGAAAA",1,20.1,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","T3Y K87T Y93N Y123P N151A",5
"lib2","SARS-CoV-2","AGATAATGAATCTGAG",13,22.57,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","E10L C49L I104P",3
"lib2","SARS-CoV-2","AGATAATGATGTCCTG",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I T100P G146W",3
"lib2","SARS-CoV-2","AGATAATGGAGTACGG",11,167.41,10.92,0.09,0.05,2.89,1.1,0,"1 nonsynonymous","S147W",1
"lib2","SARS-CoV-2","AGATAATGGTATACAC",3,52.7,10.62,-0.21,0.06,2.9,1.11,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","AGATAATTAATTTTCG",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S W23R R78H I104M Y178H",5
"lib2","SARS-CoV-2","AGATAATTGCTGCTGA",2,39.66,10.7,-0.13,0.07,2.89,1.14,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","AGATAATTGTTCTCTG",6,2.22,NA,NA,NA,NA,NA,NA,"stop","T55L Y91K C102* G174T",4
"lib2","SARS-CoV-2","AGATACAAAGGCAAAT",1,0.89,NA,NA,NA,NA,NA,NA,"stop","Q84R T100* S129E R136A C195I",5
"lib2","SARS-CoV-2","AGATACAACCAAGGTA",3,8.35,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C49K G74L Y175R",3
"lib2","SARS-CoV-2","AGATACAACCGTTAAG",6,65.01,8.41,-2.43,0.15,2.27,1.09,0.01,">1 nonsynonymous","K56R D112T",2
"lib2","SARS-CoV-2","AGATACAATAAGTCTA",1,22.06,6.76,-4.07,0.57,1.5,1.32,0.04,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","AGATACAATTGTAATG",11,83.43,7.68,-3.16,0.27,1.5,1.09,0.03,">1 nonsynonymous","F8S R25H",2
"lib2","SARS-CoV-2","AGATACACAGGACTTG",15,82.31,9.62,-1.21,0.23,1.55,1.04,0.02,">1 nonsynonymous","G51V I138G",2
"lib2","SARS-CoV-2","AGATACAGAAACCCGA",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R G86H G174R",3
"lib2","SARS-CoV-2","AGATACAGAAAGTATA",1,10.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11S S19G D34S T55N V71W Q84L D137M",7
"lib2","SARS-CoV-2","AGATACAGAACACTAC",3,16.52,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V11D L38P D112H",3
"lib2","SARS-CoV-2","AGATACAGACCGGTGT",6,34.61,6,-4.84,1.52,1.5,1.14,0.02,">1 nonsynonymous","A33S T55L N107H Y165C",4
"lib2","SARS-CoV-2","AGATACAGAGGGATTA",4,16.57,8.24,-2.6,0.3,1.5,1.03,0.03,">1 nonsynonymous","P7H N40S G51T K56F",4
"lib2","SARS-CoV-2","AGATACAGCGTAATCA",1,10.21,9.83,-1,0.18,2.47,1.09,0.01,">1 nonsynonymous","F99L E141N",2
"lib2","SARS-CoV-2","AGATACAGGAATCCGA",6,35.54,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","R27K C49N F70R",3
"lib2","SARS-CoV-2","AGATACAGTGAAGGCA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","F12A G83C K128* C158S",4
"lib2","SARS-CoV-2","AGATACATAAAGAATT",5,113.39,10.36,-0.48,0.05,2.9,1.06,0,">1 nonsynonymous","K87W S147Y",2
"lib2","SARS-CoV-2","AGATACATCAAACCTA",13,31.68,6.24,-4.59,0.92,1.5,1.22,0.04,">1 nonsynonymous","D34S D98E C102W F134G C150Y",5
"lib2","SARS-CoV-2","AGATACATCAGGTCGC",9,30.1,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","G9V N130H A145G F167S",4
"lib2","SARS-CoV-2","AGATACATTATCCCAT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","D90Y Q176R S200*",3
"lib2","SARS-CoV-2","AGATACCAAACATCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* Y159E Y175D",3
"lib2","SARS-CoV-2","AGATACCAAATCCCAA",3,17.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34W A67S G83M",3
"lib2","SARS-CoV-2","AGATACCAACGGATAC",2,11.78,9.55,-1.28,0.07,2.98,1,0,">1 nonsynonymous","N118T E154G",2
"lib2","SARS-CoV-2","AGATACCAAGCAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S A89F D98F I104M",4
"lib2","SARS-CoV-2","AGATACCAGACTATGA",9,85.64,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29R A67S P96Y L111T S184H",5
"lib2","SARS-CoV-2","AGATACCCAAAATAAA",2,46.37,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","A14G K26V A89R D98T A105R E141Y T148V Y178G",8
"lib2","SARS-CoV-2","AGATACCCATCTAATG",1,7.56,9.81,-1.02,0.47,2.3,1.08,0.06,">1 nonsynonymous","N120Q R127N K198P",3
"lib2","SARS-CoV-2","AGATACCCGAATTCCT",5,5.02,NA,NA,NA,NA,NA,NA,"stop","F12L S108I G174W K199*",4
"lib2","SARS-CoV-2","AGATACCGAAATGATA",1,18.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60F I72D K94P",3
"lib2","SARS-CoV-2","AGATACCGCAATGTCC",4,34.34,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A42L P161M P177S",3
"lib2","SARS-CoV-2","AGATACCGCAGACTCC",4,24.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Q84W A89S N107V Q168A",4
"lib2","SARS-CoV-2","AGATACCGGGTGTTAT",3,165.61,10.36,-0.48,0.03,2.96,1.05,0,">1 nonsynonymous","K87T N120S V173D",3
"lib2","SARS-CoV-2","AGATACCGGTTATCCG",5,0,NA,NA,NA,NA,NA,NA,"stop","T15* T85P Q176M T201C",4
"lib2","SARS-CoV-2","AGATACCGTATAAAGT",4,12.95,7.67,-3.17,0.23,1.5,1.08,0.02,">1 nonsynonymous","N1M N40T A81Y T100M",4
"lib2","SARS-CoV-2","AGATACCGTGCGTACT",9,81.84,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I2F C6E Y66F N118K L162E",5
"lib2","SARS-CoV-2","AGATACCGTTGTTGTA",1,22.34,10.81,-0.03,0.07,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATACCTATACTTGA",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G V103K",2
"lib2","SARS-CoV-2","AGATACCTCAGATTGT",1,35.84,9.19,-1.65,0.12,2.37,1.07,0,">1 nonsynonymous","D34G P169N",2
"lib2","SARS-CoV-2","AGATACCTGGCCGTAG",9,40.99,6,-4.84,2,3,1.13,0,">1 nonsynonymous","D68V V182C",2
"lib2","SARS-CoV-2","AGATACCTTACAAATT",11,259.29,10.84,0.01,0.04,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATACCTTCCACAAA",2,69.95,10.7,-0.13,0.02,2.97,1.03,0,">1 nonsynonymous","T55A G146A",2
"lib2","SARS-CoV-2","AGATACGAAATTAGTA",9,104.1,10.79,-0.04,0.05,2.91,1.11,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","AGATACGACTAGGCAC",2,15.93,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","I88F Y123C",2
"lib2","SARS-CoV-2","AGATACGCATATACCA",9,210.23,10.52,-0.31,0.02,2.95,1.03,0,">1 nonsynonymous","A42S D98S N120K",3
"lib2","SARS-CoV-2","AGATACGGAGTAAATT",5,56.15,10.32,-0.52,0.03,2.91,1.08,0,">1 nonsynonymous","S45N N58R",2
"lib2","SARS-CoV-2","AGATACGGCCTAAATG",13,94.02,10.82,-0.02,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATACGTAATAACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","I72* L122Q",2
"lib2","SARS-CoV-2","AGATACGTGCCGCCAA",1,37.9,10.96,0.12,0.05,2.97,1.03,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","AGATACTAAAAAGGCC",5,20.68,6.8,-4.03,0.54,1.5,1.2,0.04,">1 nonsynonymous","Y35R V65A V71N G166R",4
"lib2","SARS-CoV-2","AGATACTAAAACATGA",3,0,NA,NA,NA,NA,NA,NA,"stop","T15S R25* F44T P197W",4
"lib2","SARS-CoV-2","AGATACTAATTGGGGA",5,18.63,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","D34N I88W L95K G101I N107G",5
"lib2","SARS-CoV-2","AGATACTAGTATTGAG",1,28.54,10,-0.83,0.07,2.88,1.08,0,">1 nonsynonymous","T15W Y35L G166A",3
"lib2","SARS-CoV-2","AGATACTCCATGGAAT",11,219.33,10.05,-0.79,0.06,2.66,1.04,0,"1 nonsynonymous","S19T",1
"lib2","SARS-CoV-2","AGATACTCTAACGTTA",1,29.87,9.84,-0.99,0.09,2.65,1.1,0.01,">1 nonsynonymous","T85C I138K P149L K198Q",4
"lib2","SARS-CoV-2","AGATACTGCAATTCTC",6,177.89,10.87,0.04,0.04,2.9,1.12,0,">1 nonsynonymous","S53L N130K",2
"lib2","SARS-CoV-2","AGATACTGTAACTGAA",4,74.09,8.55,-2.28,0.18,1.54,1.12,0.01,"1 nonsynonymous","Y178D",1
"lib2","SARS-CoV-2","AGATACTGTGAACCTA",13,13.09,NA,NA,NA,NA,NA,NA,"stop","Y39* T46L T100M Q176G",4
"lib2","SARS-CoV-2","AGATACTTCATACCAC",2,19.17,9.78,-1.06,0.13,2.33,1.05,0.01,">1 nonsynonymous","C6R D90K F134Y",3
"lib2","SARS-CoV-2","AGATACTTCCAGGCAT",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L K87R Q168T",3
"lib2","SARS-CoV-2","AGATACTTGAAAATTT",1,14.1,10.66,-0.18,0.07,2.84,1.1,0,">1 nonsynonymous","T85Q Y121F",2
"lib2","SARS-CoV-2","AGATAGAAAATGAAAC",8,50.67,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","A14T E76Y G86F D137A",4
"lib2","SARS-CoV-2","AGATAGAAACCACCCG",4,46.64,8.9,-1.93,0.07,2.82,1.13,0,">1 nonsynonymous","A89S E141G Y159F",3
"lib2","SARS-CoV-2","AGATAGAAATAATGGA",2,45.13,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6Q S41R Y119L Y175R P197N",5
"lib2","SARS-CoV-2","AGATAGAACGACTAAA",1,43.52,9.67,-1.17,0.08,2.71,1.07,0,">1 nonsynonymous","A14I A145T",2
"lib2","SARS-CoV-2","AGATAGAAGATTACAG",10,1.12,NA,NA,NA,NA,NA,NA,"stop","V103T S113T Y121P L188Y T201*",5
"lib2","SARS-CoV-2","AGATAGAAGGCAGCTG",4,9.17,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N92R I104S F167T V182F",4
"lib2","SARS-CoV-2","AGATAGAATAAGTAAA",11,133.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119Q S139I F156E Y165L",4
"lib2","SARS-CoV-2","AGATAGACATAGGCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S147R N171I P197*",3
"lib2","SARS-CoV-2","AGATAGACTTATGATG",7,38.95,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N40I F99G",2
"lib2","SARS-CoV-2","AGATAGATATTGATTA",2,29.62,9.04,-1.79,0.18,2.13,1.1,0.01,">1 nonsynonymous","D90V L125F V153N",3
"lib2","SARS-CoV-2","AGATAGATGGGTTCTG",8,60.6,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5A I142V F167S",3
"lib2","SARS-CoV-2","AGATAGCAAACTTAAT",1,37.33,10.9,0.06,0.08,2.93,1.09,0,"1 nonsynonymous","S129Q",1
"lib2","SARS-CoV-2","AGATAGCACCTTAAAC",3,25.58,6.64,-4.19,0.56,1.5,1.3,0.04,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","AGATAGCCATAGTATA",8,204.79,10.36,-0.48,0.03,2.87,1.04,0,">1 nonsynonymous","A33H N151F T201G",3
"lib2","SARS-CoV-2","AGATAGCGGCGACGCC",4,61.12,9.98,-0.85,0.04,2.87,1.03,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","AGATAGCTCAGTATCT",12,190.58,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S36A S41A F47L F99T A145T G166V",6
"lib2","SARS-CoV-2","AGATAGGAATAATGAC",3,58.55,10.72,-0.12,0.05,2.96,1.08,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","AGATAGGAATTGCAAA",10,108.46,10.53,-0.31,0.04,2.89,1.11,0,">1 nonsynonymous","K87T K132S",2
"lib2","SARS-CoV-2","AGATAGGATAACGTCC",7,39.36,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S36G S45C A67D N120E I138F",5
"lib2","SARS-CoV-2","AGATAGGGACAATAAA",5,60.53,9.61,-1.23,0.08,1.98,1.07,0,"1 nonsynonymous","F185S",1
"lib2","SARS-CoV-2","AGATAGGTACACGATA",4,9.38,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A14F T100G G172M",3
"lib2","SARS-CoV-2","AGATAGGTATAAAAAT",4,53.75,10.81,-0.03,0.08,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATAGGTGCATACTT",7,107.35,10,-0.84,0.05,2.68,1.05,0,">1 nonsynonymous","N30M L57W",2
"lib2","SARS-CoV-2","AGATAGTACAGTTCAA",7,98.78,6.13,-4.7,0.63,1.5,1.19,0.01,">1 nonsynonymous","S29N F44L Q176W",3
"lib2","SARS-CoV-2","AGATAGTGAACATCCC",4,0,NA,NA,NA,NA,NA,NA,"stop","I88* P197S",2
"lib2","SARS-CoV-2","AGATAGTGATGTCCTT",14,4.51,NA,NA,NA,NA,NA,NA,"stop","F12I S41G D112L K128M F134M I142E T148Y P169*",8
"lib2","SARS-CoV-2","AGATATAAAATTATAG",2,1.22,NA,NA,NA,NA,NA,NA,"stop","G146* G172L P177R",3
"lib2","SARS-CoV-2","AGATATAAACCTGCTA",8,140.11,10.61,-0.23,0.04,2.86,1.1,0,">1 nonsynonymous","A33Y G83V E154S",3
"lib2","SARS-CoV-2","AGATATAAGAATTCTT",5,25.16,6.21,-4.62,0.69,1.5,1.14,0.02,">1 nonsynonymous","S69E I88V T100H",3
"lib2","SARS-CoV-2","AGATATAAGTCCTATA",9,102.91,10.63,-0.21,0.02,2.96,1.06,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","AGATATAATATATGAC",8,199.33,6.19,-4.64,0.52,1.5,1.13,0.01,">1 nonsynonymous","S29V N157W G166A",3
"lib2","SARS-CoV-2","AGATATAATCGTTTAC",7,62.13,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6V Y121T N130S F167S",4
"lib2","SARS-CoV-2","AGATATAATCTAATTA",7,69.84,10.06,-0.78,0.1,2.47,1,0,">1 nonsynonymous","N40C T63L Y143F A190E",4
"lib2","SARS-CoV-2","AGATATAATGTTCTCT",7,171.6,10.87,0.03,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATATACACAAGATA",5,3.5,NA,NA,NA,NA,NA,NA,"stop","T15K K26*",2
"lib2","SARS-CoV-2","AGATATACATTGCGTA",6,104.58,10.68,-0.16,0.09,2.77,1.12,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","AGATATACCCATTAAA",3,48.38,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L60V P82Y N107W F134S",4
"lib2","SARS-CoV-2","AGATATACTCGAAGTT",1,6.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123F",1
"lib2","SARS-CoV-2","AGATATACTGACAGAA",5,74.67,10.9,0.06,0.05,2.89,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATATACTTCGATAA",4,10.88,9.97,-0.87,0.13,2.79,1.04,0.01,">1 nonsynonymous","L5V G146Q",2
"lib2","SARS-CoV-2","AGATATAGTAGAAGCC",11,207.69,10.33,-0.5,0.04,2.92,1.04,0,">1 nonsynonymous","N4F T55R T148I",3
"lib2","SARS-CoV-2","AGATATATAAAACTTA",4,19.24,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12D P96N W106G K132N C158L",5
"lib2","SARS-CoV-2","AGATATATAATCCAAT",5,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R K114M Y121L L183S",4
"lib2","SARS-CoV-2","AGATATATACTGGCAG",3,29.4,10.03,-0.8,0.07,2.84,1.02,0,">1 nonsynonymous","L5A N120K Q144F",3
"lib2","SARS-CoV-2","AGATATATTTTCTTAC",12,128.37,10.19,-0.65,0.07,2.5,1.03,0,">1 nonsynonymous","P82T P197A",2
"lib2","SARS-CoV-2","AGATATCAAAAGCCTA",3,5.97,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","K26T V103P F156S",3
"lib2","SARS-CoV-2","AGATATCAGACTGAAA",1,42.51,7.71,-3.12,0.23,1.5,1.09,0.01,">1 nonsynonymous","C6P S108A Y119W",3
"lib2","SARS-CoV-2","AGATATCAGCTCAACT",2,44.12,10.84,0.01,0.06,2.93,1.08,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","AGATATCAGTTCAACA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104P K114P S139D",3
"lib2","SARS-CoV-2","AGATATCCAGCATGTA",7,101.73,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N4V N30G F167P",3
"lib2","SARS-CoV-2","AGATATCCCGAGAAAT",2,43.59,8.57,-2.27,0.1,3,1.03,0,">1 nonsynonymous","R27Y K128S G166F T201M",4
"lib2","SARS-CoV-2","AGATATCGCCAAAAAA",7,19.3,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","F12P W106R",2
"lib2","SARS-CoV-2","AGATATCTTTCCTACA",6,20.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89H L95C F134I",3
"lib2","SARS-CoV-2","AGATATGACAAACATC",3,80.01,10.68,-0.15,0.02,2.93,1.08,0,">1 nonsynonymous","R27I V37R P149L",3
"lib2","SARS-CoV-2","AGATATGACGTAGTTG",5,18.64,6,-4.84,2,2.36,1.33,0.01,">1 nonsynonymous","A33S S43F I88G A192T",4
"lib2","SARS-CoV-2","AGATATGCGAAAGACA",1,45.81,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y91N Y123K E135K",3
"lib2","SARS-CoV-2","AGATATGCGACCGTTT",6,108.47,10.42,-0.42,0.04,2.87,1.06,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","AGATATGGAAATCTCG",10,125.19,9.31,-1.52,0.03,2.95,1.04,0,">1 nonsynonymous","S41H Y119S",2
"lib2","SARS-CoV-2","AGATATGTTAAGGAGG",3,23.86,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S19M C31L P149T S200Y",4
"lib2","SARS-CoV-2","AGATATGTTACACAAT",4,25.12,6.41,-4.42,0.81,1.57,1.24,0.03,">1 nonsynonymous","P82R N120F G174Q S184F",4
"lib2","SARS-CoV-2","AGATATGTTATGCGAG",3,42.26,9.01,-1.83,0.07,2.6,1.09,0,">1 nonsynonymous","R127G G166V",2
"lib2","SARS-CoV-2","AGATATGTTGGAAACA",9,108.22,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28V A67S Q144R Q176W F185H",5
"lib2","SARS-CoV-2","AGATATTAAGTAGGAC",1,15.42,9.39,-1.45,0.35,1.5,1,0.07,">1 nonsynonymous","A81M D112I H189P",3
"lib2","SARS-CoV-2","AGATATTACAGCTTAG",8,167.92,10.72,-0.12,0.04,2.97,1.06,0,"1 nonsynonymous","S139A",1
"lib2","SARS-CoV-2","AGATATTATCGACGTG",4,26.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R T85K W106S Q144C",4
"lib2","SARS-CoV-2","AGATATTATTGGAACC",22,182.72,10.45,-0.38,0.03,2.94,1.05,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","AGATATTCCAATGACC",1,48.09,9.29,-1.55,0.05,2.95,1.07,0,">1 nonsynonymous","V11I Q168L",2
"lib2","SARS-CoV-2","AGATATTCCTGTCCAT",3,12.86,10.69,-0.15,0.08,3,1.03,0,">1 nonsynonymous","I138G T201L",2
"lib2","SARS-CoV-2","AGATATTGGTACTGCC",14,251.12,10.62,-0.21,0.02,2.94,1.05,0,"1 nonsynonymous","L57I",1
"lib2","SARS-CoV-2","AGATATTTAAGATCCT",3,113.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H Q168H",2
"lib2","SARS-CoV-2","AGATATTTATGGGACA",3,34.4,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y50F T140P F167S",3
"lib2","SARS-CoV-2","AGATATTTCATTCCCC",5,46.91,10.69,-0.14,0.04,2.95,1.07,0,">1 nonsynonymous","L5K K56R N64R",3
"lib2","SARS-CoV-2","AGATATTTTTGATTGA",2,83,9.38,-1.46,0.04,2.89,1.06,0,">1 nonsynonymous","I2S R78P Q84S N109F",4
"lib2","SARS-CoV-2","AGATCAAAACTAATAA",10,229.11,10.05,-0.79,0.03,2.91,1.03,0,">1 nonsynonymous","L57K K87T",2
"lib2","SARS-CoV-2","AGATCAAAACTGTTAG",3,5.86,NA,NA,NA,NA,NA,NA,"stop","N110*",1
"lib2","SARS-CoV-2","AGATCAAAAGACAAGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","AGATCAAAATAAATAC",2,63.52,7.36,-3.47,0.24,1.5,1.07,0.02,">1 nonsynonymous","V77Q Q144P G174W",3
"lib2","SARS-CoV-2","AGATCAAAATGCCTAT",14,45.61,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y21S D34P I142S A145S S164R P197A",6
"lib2","SARS-CoV-2","AGATCAAACTCTCCGC",2,25.27,9.91,-0.93,0.12,2.12,1.02,0.01,">1 nonsynonymous","P7K K26M W106R T201M",4
"lib2","SARS-CoV-2","AGATCAAAGGTTTATC",5,1.92,NA,NA,NA,NA,NA,NA,"stop","Y35* D97E G101E G146E",4
"lib2","SARS-CoV-2","AGATCAAAGTATGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I28P L60S G83S F126* R136E",5
"lib2","SARS-CoV-2","AGATCAACGTGCCCCA",13,212.47,10.32,-0.52,0.03,2.92,1.03,0,">1 nonsynonymous","R16I Y35T",2
"lib2","SARS-CoV-2","AGATCAAGCATACGTT",9,95.13,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","L95A Q176K",2
"lib2","SARS-CoV-2","AGATCAAGGTCTTAAT",3,114.09,10.47,-0.37,0.04,2.86,1.07,0,">1 nonsynonymous","L122G T140P",2
"lib2","SARS-CoV-2","AGATCAATAATACTAA",5,118.43,10.84,0,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATCAATATAAAAGT",21,6.73,NA,NA,NA,NA,NA,NA,"stop","T85* F99D E141*",3
"lib2","SARS-CoV-2","AGATCAATCAAATAAA",1,18.11,10.66,-0.18,0.07,3,1.04,0,"1 nonsynonymous","S200R",1
"lib2","SARS-CoV-2","AGATCAATCAATACTT",2,44.77,10.38,-0.46,0.06,2.84,1.09,0,">1 nonsynonymous","Y66H Q168S",2
"lib2","SARS-CoV-2","AGATCAATTATCACGT",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167Q A190G T201C",3
"lib2","SARS-CoV-2","AGATCACAAAAGCCAG",3,56.24,10.6,-0.24,0.05,2.85,1.15,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","AGATCACAGACTAGTA",4,58.15,10.63,-0.21,0.05,2.91,1.07,0,">1 nonsynonymous","N1E F44M Q168Y",3
"lib2","SARS-CoV-2","AGATCACCGCGCTCAA",5,126.43,9.84,-1,0.04,2.93,1.05,0,"1 nonsynonymous","P169W",1
"lib2","SARS-CoV-2","AGATCACCGGGTGAAT",7,71.41,8.08,-2.76,0.14,2.14,1.06,0.01,">1 nonsynonymous","R73H K128T",2
"lib2","SARS-CoV-2","AGATCACCGTATACCG",40,236.49,6.08,-4.75,0.45,1.5,1.14,0.01,">1 nonsynonymous","T3S S43N G51S V71E N107Y F185S",6
"lib2","SARS-CoV-2","AGATCACGAAATTCCT",1,55.1,9,-1.84,0.08,2.77,1.19,0,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","AGATCACGCAAAAACA",1,8.59,9.17,-1.66,0.17,2.22,1.02,0.01,">1 nonsynonymous","D97Y Y121N Y175F",3
"lib2","SARS-CoV-2","AGATCACTCATACGGG",3,5.36,9.8,-1.04,0.15,1.95,1.06,0.01,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","AGATCAGACGTTTTCG",5,55.62,10.07,-0.77,0.1,2.33,1.02,0,">1 nonsynonymous","P54V V65K P197T",3
"lib2","SARS-CoV-2","AGATCAGAGCCAGGAA",1,25.48,10.83,-0.01,0.07,2.65,1.33,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATCAGCATGATAAA",2,15.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C102K F167V",2
"lib2","SARS-CoV-2","AGATCAGCGATCATGG",5,67.29,10.65,-0.19,0.07,2.8,1.21,0,">1 nonsynonymous","L122R K132M P149C",3
"lib2","SARS-CoV-2","AGATCAGTCATAAACT",4,10.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15L R27E V52N G83Y Q144T P197T",6
"lib2","SARS-CoV-2","AGATCATAACCAAAAG",5,46.78,9.53,-1.31,0.06,2.93,1.07,0,">1 nonsynonymous","K87V Y121S K132H",3
"lib2","SARS-CoV-2","AGATCATACAGGACCA",3,13.98,6,-4.84,2,2.09,1.09,0,">1 nonsynonymous","S36P C61M T100P N110R G172A",5
"lib2","SARS-CoV-2","AGATCATACTTACATA",2,90.72,6,-4.84,2,3,1.2,0,">1 nonsynonymous","D112V Y165V",2
"lib2","SARS-CoV-2","AGATCATATACACGCC",5,8.13,NA,NA,NA,NA,NA,NA,"stop","E10* K114G L125H E135R",4
"lib2","SARS-CoV-2","AGATCATATCAAAACA",1,32.9,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","R16W N40I N120S S184P",4
"lib2","SARS-CoV-2","AGATCATATGTGTTAA",1,8.28,10.64,-0.2,0.08,2.9,1.07,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","AGATCATATTATGGTG",2,0.92,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","AGATCATCATGACTTG",3,24.15,6,-4.84,1.33,1.5,1.15,0.01,">1 nonsynonymous","A18R K56C R73L",3
"lib2","SARS-CoV-2","AGATCATCGTATCCTT",2,7.3,10.76,-0.08,0.08,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATCATGATGTTGAC",6,113.21,10.49,-0.34,0.03,2.91,1.1,0,"1 nonsynonymous","F12M",1
"lib2","SARS-CoV-2","AGATCATGTTAACTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G N107R Q144H F160D",4
"lib2","SARS-CoV-2","AGATCATTGTACAAAC",6,73.25,9.87,-0.97,0.11,1.64,1.12,0.01,">1 nonsynonymous","T3N D59Y E76S",3
"lib2","SARS-CoV-2","AGATCCAAAAACCAAA",6,7.09,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T55P L95G W106L P161Q V181Y",5
"lib2","SARS-CoV-2","AGATCCAAAACATACG",6,19.52,9.95,-0.88,0.36,1.67,1.01,0.05,">1 nonsynonymous","G9A A42Y L95A T201N",4
"lib2","SARS-CoV-2","AGATCCAAACTTGGCA",1,8.67,10.28,-0.55,0.19,2.02,1.12,0.02,">1 nonsynonymous","N13F T55S D97Y",3
"lib2","SARS-CoV-2","AGATCCAATGACCAAG",2,75.28,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C61T N107T G117A Q144S",4
"lib2","SARS-CoV-2","AGATCCACCTAGCAAG",7,0.4,NA,NA,NA,NA,NA,NA,"stop","G9K L57C K87E S113* R127G P133S C158Q",7
"lib2","SARS-CoV-2","AGATCCCATAACCCAT",3,16.19,8.84,-1.99,0.34,1.5,1.16,0.06,">1 nonsynonymous","E10T N64H D137N",3
"lib2","SARS-CoV-2","AGATCCCATATGTGGG",3,103.85,10.8,-0.03,0.05,2.9,1.13,0,"1 nonsynonymous","K128Q",1
"lib2","SARS-CoV-2","AGATCCCCCATGAACT",4,60.19,10.7,-0.14,0.06,2.86,1.12,0,">1 nonsynonymous","S69T S200W",2
"lib2","SARS-CoV-2","AGATCCCCTATGAGAA",1,69.93,10.79,-0.04,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATCCGAGGACCTCA",16,110.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V20W P82K N92R D112L F134G",5
"lib2","SARS-CoV-2","AGATCCGATCATCTAA",3,8.46,11.06,0.22,0.12,2.91,1.05,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGATCCGCAATACTGC",9,89.95,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F44S F160M V180F",3
"lib2","SARS-CoV-2","AGATCCGTAAAAAATA",3,27.5,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","F44L N107Y Q168W",3
"lib2","SARS-CoV-2","AGATCCGTTTGAAACA",3,14.92,6,-4.84,0.6,3,1.02,0.01,">1 nonsynonymous","L57M E135T C150Y",3
"lib2","SARS-CoV-2","AGATCCTACAAGTAAA",3,45.11,6.87,-3.97,0.25,1.5,1.09,0.01,">1 nonsynonymous","S45L D90N G146K",3
"lib2","SARS-CoV-2","AGATCCTCATCTATAA",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E A67D P149L A190P",4
"lib2","SARS-CoV-2","AGATCCTTAACAGTCA",9,5.38,NA,NA,NA,NA,NA,NA,"stop","C6L I88*",2
"lib2","SARS-CoV-2","AGATCGAACATAGCCA",15,106.38,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","W23H V37M W106V G146L",4
"lib2","SARS-CoV-2","AGATCGAACGCTCAGC",7,146.02,10.89,0.05,0.05,3,1.02,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","AGATCGAAGCAAATAA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","I28W Y39*",2
"lib2","SARS-CoV-2","AGATCGAAGGTAAACC",1,5.34,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D112G T140W",2
"lib2","SARS-CoV-2","AGATCGAGATATATTA",6,151.41,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","P7F D98V Y119Q Y175M T201S",5
"lib2","SARS-CoV-2","AGATCGATTACTATAA",3,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D L122V S129G V173P",4
"lib2","SARS-CoV-2","AGATCGCACTTCTCCA",8,38.03,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","P7E Y21G C61M G83Q",4
"lib2","SARS-CoV-2","AGATCGCAGCCAATCA",2,22.4,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","Y50D N109P",2
"lib2","SARS-CoV-2","AGATCGCAGTAGTTAT",6,15.48,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C49V I88E F99T C158V F167D",5
"lib2","SARS-CoV-2","AGATCGCGATCACAAT",10,131.55,10.55,-0.28,0.05,2.93,1.04,0,">1 nonsynonymous","G9S N58L",2
"lib2","SARS-CoV-2","AGATCGCGCCTCACAG",12,7.63,NA,NA,NA,NA,NA,NA,"stop","N24L Y39S E135P G174* A190C",5
"lib2","SARS-CoV-2","AGATCGCTTAGTTACA",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y L60A G74R P96S P149L",5
"lib2","SARS-CoV-2","AGATCGGGACTAAGGC",6,62.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2N Y35P K87A F99Y R136S L162M",6
"lib2","SARS-CoV-2","AGATCGTAAAATTTCG",6,51.33,9.6,-1.24,0.11,2.55,1.02,0,">1 nonsynonymous","K56W G146H",2
"lib2","SARS-CoV-2","AGATCGTATTGAGAGC",1,34.76,8.03,-2.81,0.19,2.24,1.12,0.01,">1 nonsynonymous","F12M Y143T",2
"lib2","SARS-CoV-2","AGATCGTTTACGCACT",1,0.72,NA,NA,NA,NA,NA,NA,"stop","L60M Q79M A105* Y121T G172D",5
"lib2","SARS-CoV-2","AGATCTAAAACCCTAG",6,83.67,6.93,-3.9,0.43,1.5,1.17,0.03,">1 nonsynonymous","A14H A42T D137Q",3
"lib2","SARS-CoV-2","AGATCTAAATACCATT",12,1579.7,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V71Y I80S",2
"lib2","SARS-CoV-2","AGATCTAAATAGCATG",2,91.04,9.63,-1.21,0.07,1.81,1.08,0,">1 nonsynonymous","L5I K26G F47I",3
"lib2","SARS-CoV-2","AGATCTAAATCTGGCA",2,8.3,9.98,-0.85,0.18,2.23,1.13,0.01,">1 nonsynonymous","L5W S19V D34N F99D S184R",5
"lib2","SARS-CoV-2","AGATCTAAGTTAATAT",3,22.26,6,-4.84,2,1.5,1.38,0.06,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","AGATCTAATTGACAAA",5,56.97,8.94,-1.9,0.08,1.87,1.05,0,">1 nonsynonymous","V37I R127L",2
"lib2","SARS-CoV-2","AGATCTAATTTAAATA",1,26.37,9.58,-1.26,0.26,1.76,1.06,0.03,">1 nonsynonymous","K48S R136F",2
"lib2","SARS-CoV-2","AGATCTACAATGTTAA",6,41.27,9.59,-1.25,0.08,1.89,1.07,0,">1 nonsynonymous","F17H T201S",2
"lib2","SARS-CoV-2","AGATCTACATAAAGGA",8,127.2,9.39,-1.45,0.04,2.83,1.09,0,">1 nonsynonymous","N58C K87E",2
"lib2","SARS-CoV-2","AGATCTACCCAAAAAT",1,25.58,10.58,-0.26,0.09,2.96,1.02,0,">1 nonsynonymous","I2K D59E P169L",3
"lib2","SARS-CoV-2","AGATCTACCTAAGAAT",1,2.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199V",1
"lib2","SARS-CoV-2","AGATCTACTAAATCGA",6,180.69,9.79,-1.05,0.07,2.52,1.04,0,">1 nonsynonymous","P7I G83N A105S K128T",4
"lib2","SARS-CoV-2","AGATCTAGAGGAGGAG",1,10.14,9.25,-1.59,0.11,2.55,1.13,0.01,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","AGATCTATAACTTCTC",3,21.45,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F12S A42W G51Q Q84N",4
"lib2","SARS-CoV-2","AGATCTATAAGTGCAA",8,129.21,10.53,-0.31,0.03,2.88,1.04,0,">1 nonsynonymous","N1W A22K S164Q S184T T201S",5
"lib2","SARS-CoV-2","AGATCTATGAAACAGT",6,107.1,10.44,-0.4,0.04,2.98,1.03,0,">1 nonsynonymous","F8L V77M",2
"lib2","SARS-CoV-2","AGATCTCCTCGCAATT",11,58.24,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V103T G117P E141A",3
"lib2","SARS-CoV-2","AGATCTCTACACATCA",12,49.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N58H P82Q D98S",3
"lib2","SARS-CoV-2","AGATCTGAATATGCAG",1,17.63,8.7,-2.13,0.19,1.63,1.12,0.01,">1 nonsynonymous","T85S V115G P133R",3
"lib2","SARS-CoV-2","AGATCTGGCCTCAAAG",1,18.5,9.86,-0.97,0.22,2.33,1.14,0.02,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","AGATCTGGGAACAAAT",2,45.71,10.31,-0.53,0.04,2.93,1.06,0,">1 nonsynonymous","A42C C61I",2
"lib2","SARS-CoV-2","AGATCTGTTTGAAAAT",1,21.38,10.45,-0.38,0.08,2.9,1.05,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","AGATCTTACACCTTAA",3,82.33,8.94,-1.9,0.07,2.39,1.1,0,">1 nonsynonymous","T63Y I142S",2
"lib2","SARS-CoV-2","AGATCTTCAAAAAGTT",3,3.78,NA,NA,NA,NA,NA,NA,"stop","V11T Y39T S139L P149*",4
"lib2","SARS-CoV-2","AGATCTTCAAAATTCA",4,80.41,9.51,-1.33,0.09,2.4,1.08,0,">1 nonsynonymous","V52S A145T",2
"lib2","SARS-CoV-2","AGATCTTCGGGAAATA",3,2.74,NA,NA,NA,NA,NA,NA,"stop","Y39H A42V A105L Y121* F160P",5
"lib2","SARS-CoV-2","AGATCTTGTTAACGGT",4,833.78,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F12K A67N Y178I",3
"lib2","SARS-CoV-2","AGATCTTTAACTGGTG",7,133.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9R I28Q I142W Y175N",4
"lib2","SARS-CoV-2","AGATGAAAAAACTTCT",1,88.05,8.52,-2.31,0.17,2.89,1.03,0.01,">1 nonsynonymous","T148N N157R",2
"lib2","SARS-CoV-2","AGATGAAAAGACAACT",1,15.56,10.34,-0.5,0.14,2.71,1.08,0.01,">1 nonsynonymous","T3V L5P D90F G152D",4
"lib2","SARS-CoV-2","AGATGAAAAGTATTGC",3,29.55,10.77,-0.06,0.04,2.87,1.09,0,">1 nonsynonymous","N4S L60V F160Y",3
"lib2","SARS-CoV-2","AGATGAAACAAAAGTT",5,57.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S41R T85E G172V",3
"lib2","SARS-CoV-2","AGATGAAACAAGAACG",10,137.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1K V52D Q176P L187C",4
"lib2","SARS-CoV-2","AGATGAAACATATCAT",1,13.34,6.25,-4.58,0.62,3,1.14,0.01,">1 nonsynonymous","V11A S69V N151R",3
"lib2","SARS-CoV-2","AGATGAAACGATAGAG",5,38.85,10.73,-0.1,0.04,2.97,1.02,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","AGATGAAACGCTACGG",13,75.28,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D112L Y119K Y143A T201V",4
"lib2","SARS-CoV-2","AGATGAAATAGTGTAA",7,1.5,NA,NA,NA,NA,NA,NA,"stop","S69R K132T G166* P197R",4
"lib2","SARS-CoV-2","AGATGAACGAGGATAC",14,186.08,9.93,-0.91,0.05,2.27,1.07,0,">1 nonsynonymous","D59R P133W G196S",3
"lib2","SARS-CoV-2","AGATGAAGATATAGGA",4,50.13,10.73,-0.11,0.03,3,1,0,">1 nonsynonymous","S41T P149G",2
"lib2","SARS-CoV-2","AGATGAATACCCGGAA",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V N13K C61I D68V",4
"lib2","SARS-CoV-2","AGATGAATACTTGCTA",1,27.23,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A89K R136I E141C",3
"lib2","SARS-CoV-2","AGATGAATGCTGGAGG",8,74.43,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","D59Y I88K",2
"lib2","SARS-CoV-2","AGATGAATGCTTCCAT",6,0,NA,NA,NA,NA,NA,NA,"stop","C6A N110E L122*",3
"lib2","SARS-CoV-2","AGATGACACCCACTAC",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V Y121Q T201W",3
"lib2","SARS-CoV-2","AGATGACCAAACGTGC",6,52.03,10.19,-0.65,0.07,2.54,1.04,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AGATGACCCAGCTCTG",8,23.16,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N13L W23R D98V",3
"lib2","SARS-CoV-2","AGATGACCCGGCTAAG",1,0.71,NA,NA,NA,NA,NA,NA,"stop","F8* D98L C102M",3
"lib2","SARS-CoV-2","AGATGACCTATTAACC",10,45.38,8.64,-2.2,0.27,1.5,1,0.03,">1 nonsynonymous","G86S K114S L122A P149L",4
"lib2","SARS-CoV-2","AGATGACGACGACAGG",5,84.69,9.98,-0.86,0.04,2.67,1.06,0,">1 nonsynonymous","N110L G116S S129A E141Y",4
"lib2","SARS-CoV-2","AGATGACGGATGACAA",1,27.02,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F99K F156S",2
"lib2","SARS-CoV-2","AGATGACTGATGAGAT",2,22.52,7.28,-3.55,0.18,1.87,1.08,0.01,">1 nonsynonymous","T3Y C61V S113P",3
"lib2","SARS-CoV-2","AGATGACTGTTATGCA",7,49.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10Q K26S V52Y K94I",4
"lib2","SARS-CoV-2","AGATGAGAACAAGCAA",3,10.02,10.16,-0.67,0.15,2.87,1,0,">1 nonsynonymous","S139L G146S",2
"lib2","SARS-CoV-2","AGATGAGACTTGATAG",5,54.09,10.89,0.05,0.07,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATGAGCCACCTACA",9,30.04,10.63,-0.2,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGAGCTTGGAACC",1,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9T",1
"lib2","SARS-CoV-2","AGATGAGGACCAATAT",2,52.47,10.88,0.04,0.03,2.92,1.1,0,">1 nonsynonymous","I2P N130V",2
"lib2","SARS-CoV-2","AGATGAGGTTGCCAAA",14,168.82,10.8,-0.04,0.02,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGATCAAGGTAAT",8,0.05,NA,NA,NA,NA,NA,NA,"stop","D68R Y123* N151I",3
"lib2","SARS-CoV-2","AGATGATGTACGCAAC",2,0.67,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib2","SARS-CoV-2","AGATGATTAGCACGGA",11,178.23,10.88,0.04,0.04,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGATTATAACGCT",6,140.71,10.31,-0.53,0.03,2.97,1.04,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","AGATGATTCTCCAGGA",2,17.03,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A14L V77M R127M",3
"lib2","SARS-CoV-2","AGATGATTGCTCGGCA",4,51.3,9.37,-1.46,0.12,1.53,1.06,0.01,">1 nonsynonymous","N24A V32A V52S",3
"lib2","SARS-CoV-2","AGATGATTGGGAGTAA",1,25.23,10.81,-0.03,0.06,2.99,1,0,">1 nonsynonymous","K48E L111I",2
"lib2","SARS-CoV-2","AGATGCACCTTGTTAG",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W L183N",2
"lib2","SARS-CoV-2","AGATGCAGCCCAGTCT",15,311.79,8.01,-2.82,0.13,1.89,1.05,0.01,">1 nonsynonymous","Y35V D97K S113K",3
"lib2","SARS-CoV-2","AGATGCATAAGAGCTT",5,64.84,10.75,-0.08,0.09,2.83,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGCATATATACAG",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S L95R W106L",3
"lib2","SARS-CoV-2","AGATGCCACTGGAACA",8,178.47,8.75,-2.08,0.07,2.37,1.08,0,">1 nonsynonymous","N107T F156R",2
"lib2","SARS-CoV-2","AGATGCCATTCGATTA",9,87.14,10.78,-0.06,0.08,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATGCCCCACCACAC",8,61.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R78S A105H P133S T140K G152Y",5
"lib2","SARS-CoV-2","AGATGCCCCTTTCTTG",3,11.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19I C61G E141S",3
"lib2","SARS-CoV-2","AGATGCGAAAAAGAAT",3,1.49,NA,NA,NA,NA,NA,NA,"stop","L38M N64*",2
"lib2","SARS-CoV-2","AGATGCGACCACACTG",2,15.31,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","T46Y L122P R179F",3
"lib2","SARS-CoV-2","AGATGCGACTATGATT",12,60.84,9.19,-1.64,0.17,1.58,1.06,0.01,">1 nonsynonymous","S69G T148C",2
"lib2","SARS-CoV-2","AGATGCGCAAATAAAA",4,71.51,10.51,-0.33,0.05,2.89,1.11,0,">1 nonsynonymous","A42L T140L",2
"lib2","SARS-CoV-2","AGATGCGCTAAGCAAC",2,28.08,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N107D Y121S G166R",3
"lib2","SARS-CoV-2","AGATGCGCTAGTGGGG",1,10.45,9.53,-1.31,0.19,1.87,1.2,0.03,">1 nonsynonymous","R16T A33P K48N Q79R",4
"lib2","SARS-CoV-2","AGATGCGTTACTCGCA",4,75.66,10.78,-0.05,0.06,2.87,1.12,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","AGATGCTAAGTACATA",3,0,NA,NA,NA,NA,NA,NA,"stop","N1M D34K G51T V103S W106* D137T F160S",7
"lib2","SARS-CoV-2","AGATGCTAATAATAAC",3,28.89,9.53,-1.3,0.23,1.77,1.17,0.02,">1 nonsynonymous","P96Q W106Q Y119L I142P S200L",5
"lib2","SARS-CoV-2","AGATGCTAGACAAACA",1,0.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","AGATGCTAGTCTAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib2","SARS-CoV-2","AGATGCTATGTTAAAC",10,184.51,8.32,-2.52,0.15,2,1.08,0.01,">1 nonsynonymous","I28H Y143I K198E",3
"lib2","SARS-CoV-2","AGATGCTATTTTAATG",5,40.99,10.37,-0.47,0.04,2.78,1.13,0,">1 nonsynonymous","I138V E186F",2
"lib2","SARS-CoV-2","AGATGCTTGTATACCT",1,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A A42L K48N F134K",4
"lib2","SARS-CoV-2","AGATGGAAAACTGAAA",9,5.25,NA,NA,NA,NA,NA,NA,"stop","N4D D34R Y159* T201H",4
"lib2","SARS-CoV-2","AGATGGAGTGTAGTGA",6,26.09,9.23,-1.61,0.09,2.7,1.18,0,">1 nonsynonymous","A145C F160E",2
"lib2","SARS-CoV-2","AGATGGAGTTTAAACG",12,49.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L G9Y V32A S43L C49R",5
"lib2","SARS-CoV-2","AGATGGATTACTAGCA",8,43.18,9.25,-1.59,0.13,1.73,1.14,0.01,">1 nonsynonymous","C61V Y123F R136P",3
"lib2","SARS-CoV-2","AGATGGCAAACCGATG",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K P96T",2
"lib2","SARS-CoV-2","AGATGGCAAATATAGA",2,30.77,10.76,-0.08,0.07,2.76,1.27,0,">1 nonsynonymous","F160Y T201N",2
"lib2","SARS-CoV-2","AGATGGCAAGTGCTTT",4,76.37,10.56,-0.27,0.05,2.97,1.03,0,"1 nonsynonymous","P96G",1
"lib2","SARS-CoV-2","AGATGGCAGCATTCGG",10,150.92,10.64,-0.2,0.06,2.89,1.11,0,">1 nonsynonymous","F44Y N151C",2
"lib2","SARS-CoV-2","AGATGGGGGGCCCCTG",8,28.77,6,-4.84,2,1.5,1.31,0.08,">1 nonsynonymous","Y35W K56L Y93D V103E P149L",5
"lib2","SARS-CoV-2","AGATGGGGTGACCACA",8,81.17,9.2,-1.63,0.08,2.96,1.11,0,"1 nonsynonymous","Q163D",1
"lib2","SARS-CoV-2","AGATGGGGTGGGAAAC",2,41.46,10.64,-0.2,0.06,2.91,1.07,0,">1 nonsynonymous","T148M Q163W",2
"lib2","SARS-CoV-2","AGATGGGTATCGAAAT",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P P82M T148V",3
"lib2","SARS-CoV-2","AGATGGGTCCTGGACT",4,24.81,10.24,-0.6,0.09,2.69,1.02,0.01,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","AGATGGGTGTGTTAGT",3,37.36,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","I28E Q144K G152I T201N",4
"lib2","SARS-CoV-2","AGATGGGTTCTCTATC",8,38.11,8.07,-2.77,0.11,1.85,1.08,0,">1 nonsynonymous","D97K Q168T V181L",3
"lib2","SARS-CoV-2","AGATGGTAAACTGAAA",5,2.36,NA,NA,NA,NA,NA,NA,"stop","W23L K56M F99L W106R L111*",5
"lib2","SARS-CoV-2","AGATGGTAAATCCGAG",2,12.58,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C49L K132P V182M",3
"lib2","SARS-CoV-2","AGATGGTACAATTTAT",5,26.41,6.67,-4.17,0.42,1.5,1.13,0.02,">1 nonsynonymous","N64A V180R",2
"lib2","SARS-CoV-2","AGATGGTACAGTCCCA",5,129.88,10.82,-0.02,0.04,2.95,1.06,0,"1 nonsynonymous","N120K",1
"lib2","SARS-CoV-2","AGATGGTATATGAGAC",20,1.28,NA,NA,NA,NA,NA,NA,"stop","R25Q S41Y N64* G86R T148E",5
"lib2","SARS-CoV-2","AGATGGTCTGGGCAAT",1,13.71,10.76,-0.07,0.09,2.87,1.11,0,"1 nonsynonymous","L60C",1
"lib2","SARS-CoV-2","AGATGTAAATAACGTC",4,29.55,10.7,-0.14,0.05,2.77,1.23,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","AGATGTAAATAGTTCC",3,45.7,8.27,-2.56,0.14,1.94,1.16,0.01,">1 nonsynonymous","V11T V37S A105S Y119A E141N",5
"lib2","SARS-CoV-2","AGATGTAATTTATAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C61T G86N N120* R127L K199Y",5
"lib2","SARS-CoV-2","AGATGTACATGAAACC",7,37.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S53P P96L C102F",3
"lib2","SARS-CoV-2","AGATGTATAATGAAAC",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L N58R D98R S113Q K128W P133L Q168N",7
"lib2","SARS-CoV-2","AGATGTATAGAAGGTG",1,27.85,8.25,-2.58,0.11,2.75,1,0,">1 nonsynonymous","D34V C61V L125A G174V",4
"lib2","SARS-CoV-2","AGATGTATCAATCAAA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K F156L G166D",3
"lib2","SARS-CoV-2","AGATGTCAACGAAACT",6,30.76,6,-4.84,1.4,1.5,1.16,0.02,">1 nonsynonymous","K87G R127T",2
"lib2","SARS-CoV-2","AGATGTCAGAACGTTT",2,24.86,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","A81V L95S V115Q",3
"lib2","SARS-CoV-2","AGATGTCCATAAAATA",3,62.78,10.83,0,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGTCCCTTTATAA",1,18.01,9.14,-1.69,0.16,1.99,1.04,0.01,">1 nonsynonymous","A81Y E154L",2
"lib2","SARS-CoV-2","AGATGTCTATCAAAGT",3,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N I72K K94E E141W T170M",5
"lib2","SARS-CoV-2","AGATGTGATGAGAAAA",1,20.12,10.78,-0.06,0.06,2.95,1,0,"1 nonsynonymous","Y123V",1
"lib2","SARS-CoV-2","AGATGTGCCAGAACAG",1,16.67,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G51V C61M I88Y",3
"lib2","SARS-CoV-2","AGATGTGTCGGCAACA",5,87.96,9.94,-0.89,0.07,2.58,1,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","AGATGTTAATGAGAAC",12,174.89,9.71,-1.12,0.03,2.73,1.1,0,">1 nonsynonymous","R78C N107P V153Y K198R",4
"lib2","SARS-CoV-2","AGATGTTACAATTAAC",9,95.23,7.1,-3.73,0.33,1.5,1.07,0.03,">1 nonsynonymous","K87E S139R S164C T170M L187M P191T",6
"lib2","SARS-CoV-2","AGATGTTCATAGCAGT",15,175.72,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9F R25I Y35V A105E",4
"lib2","SARS-CoV-2","AGATGTTCCAGAATTC",3,9.99,9.7,-1.13,0.15,3,1.03,0,"1 nonsynonymous","Y119M",1
"lib2","SARS-CoV-2","AGATGTTCCAGTACAT",4,30.05,10.81,-0.03,0.06,2.86,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATGTTGAGGCCGGG",1,26.88,10.86,0.02,0.04,2.91,1.12,0,">1 nonsynonymous","S129R V173W P197L",3
"lib2","SARS-CoV-2","AGATGTTGCACGGACT",3,26.74,7.79,-3.05,0.27,1.5,1.07,0.02,">1 nonsynonymous","A89S A105N",2
"lib2","SARS-CoV-2","AGATTAAAAACTTTGT",3,26.2,6,-4.84,1.81,1.5,1.12,0.03,">1 nonsynonymous","K56N Y119M A145V P161T",4
"lib2","SARS-CoV-2","AGATTAAAATATTGAA",11,167.95,10.41,-0.43,0.02,2.93,1.03,0,">1 nonsynonymous","F44M V173F",2
"lib2","SARS-CoV-2","AGATTAACAAAACTAT",2,36.18,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","I80R V173L",2
"lib2","SARS-CoV-2","AGATTAACACTCAGAG",1,0.75,NA,NA,NA,NA,NA,NA,"stop","F8R W23* Y35* T85L N107R",5
"lib2","SARS-CoV-2","AGATTAAGCATATAAA",2,98.01,10.7,-0.14,0.03,2.92,1.06,0,">1 nonsynonymous","D75S T148Y",2
"lib2","SARS-CoV-2","AGATTAAGGTTATGTA",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R G117V P161T V173N",4
"lib2","SARS-CoV-2","AGATTAATAGATCTAT",9,145.06,10.89,0.05,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTAATGCAAACCA",4,35.01,9.47,-1.36,0.11,2.43,1.18,0.01,">1 nonsynonymous","S19D V37P Y39H",3
"lib2","SARS-CoV-2","AGATTAATGCAATCGT",1,16.08,10.88,0.05,0.14,2.85,1.1,0.01,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","AGATTAATGTCTTGAC",5,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K T55L F99H E135R N151Y Y165R",6
"lib2","SARS-CoV-2","AGATTACAAGTAGTAA",1,23.37,10.19,-0.64,0.13,2.51,1,0.01,">1 nonsynonymous","D90H K128I",2
"lib2","SARS-CoV-2","AGATTACACAAGACCA",9,68.57,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A14E V37S Y50I T85W N107H T201S",6
"lib2","SARS-CoV-2","AGATTACATGACGACC",6,41.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S113W I142G T148D T201E",4
"lib2","SARS-CoV-2","AGATTACATGAGGGAT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","S45W V77* D90V Y165E R179T",5
"lib2","SARS-CoV-2","AGATTACATGCAAGGA",3,17.62,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N64G N118K R124T",3
"lib2","SARS-CoV-2","AGATTACCACCCTTAA",10,211.61,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","R16G K87R D112Q P149L",4
"lib2","SARS-CoV-2","AGATTACCCCACAAAT",11,102.6,10.65,-0.19,0.03,2.93,1.06,0,">1 nonsynonymous","F62Y Q144R",2
"lib2","SARS-CoV-2","AGATTACCTATATAAA",1,22.49,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G83I A105T N157F",3
"lib2","SARS-CoV-2","AGATTACGAAAACACC",13,182.72,9.06,-1.78,0.03,2.96,1.07,0,">1 nonsynonymous","P54L T100Y G117D",3
"lib2","SARS-CoV-2","AGATTACGAGCAAAGT",2,13.63,8.98,-1.86,0.17,1.89,1.12,0.01,">1 nonsynonymous","C6E V37L D75L",3
"lib2","SARS-CoV-2","AGATTACGCTCAAACA",6,153.55,9.22,-1.61,0.07,2.83,1.16,0,">1 nonsynonymous","Y39N S129H T170E",3
"lib2","SARS-CoV-2","AGATTACGTTTTGGCC",5,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S F99I N120W",3
"lib2","SARS-CoV-2","AGATTACTATCAACTT",2,50.56,10.24,-0.6,0.03,2.95,1.04,0,">1 nonsynonymous","A81G V115G",2
"lib2","SARS-CoV-2","AGATTACTCTCCTATA",9,68.03,7.6,-3.24,0.19,1.5,1.04,0.01,">1 nonsynonymous","A89S Y143R",2
"lib2","SARS-CoV-2","AGATTACTGGGCATAG",2,6.44,10.33,-0.5,0.12,2.96,1,0,"1 nonsynonymous","D59P",1
"lib2","SARS-CoV-2","AGATTACTGTAAACGG",10,87.91,10.29,-0.55,0.06,2.66,1.04,0,">1 nonsynonymous","A42G E135F T201P",3
"lib2","SARS-CoV-2","AGATTAGAAATCAAAA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45W Y93G",2
"lib2","SARS-CoV-2","AGATTAGAGGACATTT",2,15.92,6,-4.84,2,2.11,1.21,0.02,">1 nonsynonymous","F8A Y123C",2
"lib2","SARS-CoV-2","AGATTAGCAGTGCCCT",2,31.44,9,-1.84,0.18,2.33,1.03,0.01,">1 nonsynonymous","G9T I72C L122M I142S K198N",5
"lib2","SARS-CoV-2","AGATTAGCATAAGTTC",1,12.71,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","AGATTAGCCGTCAGTA",7,67.7,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9T T63Q G86I P96N C102L",5
"lib2","SARS-CoV-2","AGATTAGCGACTTAAA",5,72.83,6.38,-4.46,0.36,1.5,1.08,0.01,">1 nonsynonymous","G83L D112H",2
"lib2","SARS-CoV-2","AGATTAGCGCCAAGAA",9,85.03,8.25,-2.58,0.21,1.5,1,0.02,">1 nonsynonymous","F17L Y91V F156K A190E T201H",5
"lib2","SARS-CoV-2","AGATTAGGATCGCGTG",7,1.87,NA,NA,NA,NA,NA,NA,"stop","L38* V71E",2
"lib2","SARS-CoV-2","AGATTAGGGCATTCTA",16,123.65,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S45V A67P I104A P149S F167R",5
"lib2","SARS-CoV-2","AGATTAGTAACGCTGT",2,73.18,10.73,-0.11,0.07,2.81,1.21,0,"1 nonsynonymous","V115Y",1
"lib2","SARS-CoV-2","AGATTAGTGTTACCTG",3,38.83,9.64,-1.2,0.2,1.5,1.09,0.02,">1 nonsynonymous","D68T V77L",2
"lib2","SARS-CoV-2","AGATTAGTTCCATATC",7,37.23,10.8,-0.04,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTAGTTTAATTTG",3,0.46,NA,NA,NA,NA,NA,NA,"stop","N13* R27K D137P P169D",4
"lib2","SARS-CoV-2","AGATTATAATCAGTTT",5,147.17,10.85,0.01,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTATACATTAGCT",16,159.85,6,-4.84,0.91,1.5,1.16,0.01,">1 nonsynonymous","G101N N107I K128V",3
"lib2","SARS-CoV-2","AGATTATAGAACATTT",1,13.16,9.02,-1.82,0.14,2.66,1.06,0.01,">1 nonsynonymous","S129A Q144W F156S",3
"lib2","SARS-CoV-2","AGATTATAGTATTCTG",12,106.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C31I G86F N157S",3
"lib2","SARS-CoV-2","AGATTATATAGGTTAA",2,37.84,10.25,-0.59,0.05,2.89,1.07,0,"1 nonsynonymous","F167Y",1
"lib2","SARS-CoV-2","AGATTATATGTAAGTT",2,31.83,10.52,-0.32,0.06,2.9,1.08,0,">1 nonsynonymous","I2V T15E S36D K87T",4
"lib2","SARS-CoV-2","AGATTATCATGAATTG",5,17.44,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","T3A F44N C61G I80P",4
"lib2","SARS-CoV-2","AGATTATGGTGCGAGA",1,38.4,10.87,0.03,0.08,2.83,1.18,0,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","AGATTATTACATAATC",3,31.39,10.33,-0.51,0.07,2.79,1.12,0,">1 nonsynonymous","N1Q K56L F62S",3
"lib2","SARS-CoV-2","AGATTATTATTGTTGG",16,102.83,6,-4.84,2,3,1.19,0,">1 nonsynonymous","D68G T100L G117F Q144L V181L G196T",6
"lib2","SARS-CoV-2","AGATTATTCCGCGTAA",6,106.17,10.18,-0.66,0.04,2.89,1.05,0,">1 nonsynonymous","C6D P7T T46I",3
"lib2","SARS-CoV-2","AGATTATTCGTAGATA",6,103.5,10.2,-0.63,0.04,3,1.04,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","AGATTCAACACTACAG",3,16.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10I C31L V77G C150V F156A",5
"lib2","SARS-CoV-2","AGATTCAAGGACTTCG",1,7.35,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L60Q P169D V182Y",3
"lib2","SARS-CoV-2","AGATTCACATACTACG",2,32.78,10.31,-0.53,0.07,3,1,0,">1 nonsynonymous","N1M P169L",2
"lib2","SARS-CoV-2","AGATTCACGATAAATT",4,105.36,10.56,-0.28,0.06,2.9,1.05,0,">1 nonsynonymous","R27H K56M F160I",3
"lib2","SARS-CoV-2","AGATTCACGTAGTAGG",8,30.05,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","I2R P7S S36N L95R I104N G117T",6
"lib2","SARS-CoV-2","AGATTCACTACTTATA",2,9.76,10.25,-0.58,0.15,2.94,1,0.01,">1 nonsynonymous","F12M V65A",2
"lib2","SARS-CoV-2","AGATTCAGCCCCCCAT",2,7.64,6.31,-4.52,2,1.58,1.28,0.05,">1 nonsynonymous","K56F I88E N120K R127S K198M",5
"lib2","SARS-CoV-2","AGATTCATCGCTGATT",7,54.35,9.42,-1.42,0.17,1.55,1.01,0.01,">1 nonsynonymous","N4S P82Q",2
"lib2","SARS-CoV-2","AGATTCATGAACTGTG",7,34.78,6,-4.84,0.61,1.5,1.05,0,">1 nonsynonymous","G51R D75F I80V R127H",4
"lib2","SARS-CoV-2","AGATTCATGAGCTTCT",8,0.62,NA,NA,NA,NA,NA,NA,"stop","Q84* I88T K128L F134S V182M",5
"lib2","SARS-CoV-2","AGATTCATTGTAAGCT",1,28.64,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G9E G51H N64R F99L V173S",5
"lib2","SARS-CoV-2","AGATTCCCTAGCGAAA",3,28.2,10.78,-0.06,0.05,3,1.05,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","AGATTCCCTTAACAGA",3,23.77,6,-4.84,2,1.5,1.4,0.05,">1 nonsynonymous","A33K N58I V77Q A81D C102W",5
"lib2","SARS-CoV-2","AGATTCCGGCCAACAA",6,158.39,10.12,-0.72,0.06,2.75,1.01,0,">1 nonsynonymous","T15C A192T",2
"lib2","SARS-CoV-2","AGATTCCTCGCCTATT",4,35.72,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T55Q A105E H189W",3
"lib2","SARS-CoV-2","AGATTCCTTCAAAAAA",6,80.63,10.85,0.02,0.05,2.95,1.06,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","AGATTCGAACCAAAAC",1,43.32,10.77,-0.06,0.04,3,1.02,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","AGATTCGACGGACCCT",2,44.13,10.11,-0.73,0.09,2.57,1,0,"1 nonsynonymous","P82V",1
"lib2","SARS-CoV-2","AGATTCGACTGGTAAA",3,35.29,10.86,0.02,0.06,2.9,1.13,0,">1 nonsynonymous","V37F L38I T55R",3
"lib2","SARS-CoV-2","AGATTCGCCGATAACA",23,632.54,8.48,-2.36,0.1,2.92,1.06,0,"1 nonsynonymous","Y175Q",1
"lib2","SARS-CoV-2","AGATTCGTTACTCGAA",3,34.51,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","S29E G51W F99I L125T",4
"lib2","SARS-CoV-2","AGATTCTAACTTACTG",15,125.85,10.73,-0.1,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTCTAATCATAAT",5,7.15,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15D K48Y I88T Y121N",4
"lib2","SARS-CoV-2","AGATTCTACATTTCTG",6,31.73,9.76,-1.07,0.23,1.74,1.09,0.03,">1 nonsynonymous","L95V F99V",2
"lib2","SARS-CoV-2","AGATTCTCTAAGATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103P N130Y",2
"lib2","SARS-CoV-2","AGATTCTGGTCATATA",5,43.9,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y66W R73T G83S A89M D112V Q176L",6
"lib2","SARS-CoV-2","AGATTCTTTAACATCT",3,14.31,10.62,-0.22,0.08,2.97,1.04,0,"1 nonsynonymous","P169L",1
"lib2","SARS-CoV-2","AGATTGAAAATGAATT",3,77.43,8.72,-2.12,0.12,1.6,1.09,0.01,">1 nonsynonymous","F8D I28F S164V",3
"lib2","SARS-CoV-2","AGATTGAACAAGAATC",9,194.92,10.75,-0.09,0.05,2.94,1.08,0,"1 nonsynonymous","A14Q",1
"lib2","SARS-CoV-2","AGATTGAAGACACCTA",9,25.15,8.47,-2.36,0.41,1.5,1.06,0.07,">1 nonsynonymous","I2T K87T D97N Q144I N151K V181Q",6
"lib2","SARS-CoV-2","AGATTGAAGATAAATG",3,23.24,10.74,-0.09,0.07,3,1.04,0,">1 nonsynonymous","T85N D97L",2
"lib2","SARS-CoV-2","AGATTGAAGATAGCGC",4,40.85,7.75,-3.09,0.37,1.5,1,0.05,">1 nonsynonymous","N4L A33S L95G",3
"lib2","SARS-CoV-2","AGATTGAATGGAATTT",2,41.71,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82K L131D E141S",3
"lib2","SARS-CoV-2","AGATTGACCTTCGATT",1,2.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","AGATTGAGTCTTAAAT",6,58.71,10.19,-0.65,0.08,2.79,1.06,0,"1 nonsynonymous","Y35W",1
"lib2","SARS-CoV-2","AGATTGATCTTATTGC",16,141.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G V103M",2
"lib2","SARS-CoV-2","AGATTGATTTCCTAAA",2,7.43,10.31,-0.52,0.05,3,1,0,"1 nonsynonymous","G155N",1
"lib2","SARS-CoV-2","AGATTGCCTAATACCA",5,19.31,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13K I88F",2
"lib2","SARS-CoV-2","AGATTGCGCAGTAATA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","I28* F44Y D90I P149M P197T",5
"lib2","SARS-CoV-2","AGATTGCGCCCCAAGA",3,58.67,10.79,-0.05,0.05,2.88,1.15,0,"1 nonsynonymous","S113A",1
"lib2","SARS-CoV-2","AGATTGCTTTACCAAT",1,48.24,10.72,-0.12,0.05,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTGGAAAAATTAG",3,18.45,10.11,-0.73,0.14,2.61,1,0.01,"1 nonsynonymous","D34I",1
"lib2","SARS-CoV-2","AGATTGGGTCACAACA",6,34.46,9.18,-1.65,0.07,1.86,1.05,0,"1 nonsynonymous","G86A",1
"lib2","SARS-CoV-2","AGATTGGTATGCTGGA",6,20.28,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","F70V Y121K Y143M A192G",4
"lib2","SARS-CoV-2","AGATTGGTATTAAAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","F8V S36L S45C N64Q F70* G83I D90M",7
"lib2","SARS-CoV-2","AGATTGTCATAAATGC",1,104.02,10.83,0,0.04,2.88,1.06,0,"1 nonsynonymous","I2H",1
"lib2","SARS-CoV-2","AGATTGTCCGCAAAGC",3,21.17,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S36L F70T F99N N120L Y165F",5
"lib2","SARS-CoV-2","AGATTGTCCTCGATTC",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N P54L G155H",3
"lib2","SARS-CoV-2","AGATTGTCCTCTCCAA",6,57.88,10.89,0.06,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTGTCTATCTAAA",3,122.02,9.77,-1.07,0.09,2.24,1.13,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","AGATTGTGACGCAAAG",2,12.47,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1V C49R",2
"lib2","SARS-CoV-2","AGATTGTTGTAGGTGA",6,76.78,9.23,-1.61,0.05,2.91,1.09,0,">1 nonsynonymous","S43F Y119V",2
"lib2","SARS-CoV-2","AGATTGTTGTGCAATC",2,34.95,10.75,-0.09,0.05,2.99,1.04,0,">1 nonsynonymous","N120K T201A",2
"lib2","SARS-CoV-2","AGATTTAAACGTTGCA",5,35.52,6,-4.84,1.47,1.5,1.16,0.02,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","AGATTTAAAGAGGTCG",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T P169Y",2
"lib2","SARS-CoV-2","AGATTTAAATACGCAT",4,2369.69,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y91Q W106C",2
"lib2","SARS-CoV-2","AGATTTAAATAGATTT",11,4.26,NA,NA,NA,NA,NA,NA,"stop","T55L V71*",2
"lib2","SARS-CoV-2","AGATTTAAATATTATT",3,37.58,10.67,-0.16,0.12,2.86,1.02,0.01,">1 nonsynonymous","K56A K114R",2
"lib2","SARS-CoV-2","AGATTTAATTAACATA",6,59.54,10.07,-0.76,0.06,2.49,1.05,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AGATTTAATTATATGA",9,71.63,9.68,-1.16,0.08,1.79,1.13,0,">1 nonsynonymous","V37S P82L",2
"lib2","SARS-CoV-2","AGATTTACATGTACTA",3,72.38,10.9,0.06,0.06,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGATTTACTCAATCGC",2,73.39,10.89,0.05,0.05,2.99,1.02,0,">1 nonsynonymous","L122F H189S",2
"lib2","SARS-CoV-2","AGATTTACTTTCGATT",4,72.09,11.09,0.25,0.06,2.87,1.11,0,">1 nonsynonymous","N120S N171T",2
"lib2","SARS-CoV-2","AGATTTAGAGTGGACA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","N58* T148* K198L",3
"lib2","SARS-CoV-2","AGATTTAGTCTACATA",3,57.14,9.25,-1.59,0.08,2.7,1.06,0,">1 nonsynonymous","R136T F156M",2
"lib2","SARS-CoV-2","AGATTTATAAGAAAAA",7,90.46,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A89D G146M",2
"lib2","SARS-CoV-2","AGATTTATCGACATCA",1,9.92,10.61,-0.23,0.08,3,1,0,">1 nonsynonymous","A42N D90N",2
"lib2","SARS-CoV-2","AGATTTATTGGCCCAC",5,83.46,10.76,-0.08,0.03,2.95,1.04,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","AGATTTCACTATTGTA",4,30.86,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","E10F A89F P133L",3
"lib2","SARS-CoV-2","AGATTTCCCCAAATCA",5,36.07,8.26,-2.57,0.28,1.73,1.18,0.02,">1 nonsynonymous","S53N Y91S A105G",3
"lib2","SARS-CoV-2","AGATTTCGCCTACCTA",7,77.2,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20E V37L G172P",3
"lib2","SARS-CoV-2","AGATTTCGGACCGTAG",8,153.24,8.67,-2.17,0.07,1.93,1.1,0,">1 nonsynonymous","C6Y L60F R73M",3
"lib2","SARS-CoV-2","AGATTTCTATGAGTAT",3,20.77,10.64,-0.2,0.07,3,1.05,0,">1 nonsynonymous","R27Q F134Q",2
"lib2","SARS-CoV-2","AGATTTCTCCTATGCT",4,80.35,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6P Y93D N157Y",3
"lib2","SARS-CoV-2","AGATTTCTGGTACGAA",4,88.15,10.61,-0.22,0.03,2.94,1.06,0,">1 nonsynonymous","T55I N151Y",2
"lib2","SARS-CoV-2","AGATTTGAACGCAATC",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S41A F47N E154S V181C",5
"lib2","SARS-CoV-2","AGATTTGAACTATATA",4,1.8,NA,NA,NA,NA,NA,NA,"stop","C6I P82T N107Y Y165*",4
"lib2","SARS-CoV-2","AGATTTGACCCGAATT",1,10.89,10.32,-0.52,0.09,2.98,1,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","AGATTTGATCACGGAC",11,164.38,10.04,-0.79,0.04,2.89,1.04,0,">1 nonsynonymous","G9R Y121L R136K",3
"lib2","SARS-CoV-2","AGATTTGCTACATCGG",4,11.02,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F126V Q144S F156S G172R T201W",5
"lib2","SARS-CoV-2","AGATTTGGTGTTCTGA",4,83.64,9.1,-1.73,0.06,2.31,1.05,0,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","AGATTTTAACCACAAC",1,30.82,10.22,-0.62,0.08,2.81,1,0,">1 nonsynonymous","S45M E141G",2
"lib2","SARS-CoV-2","AGATTTTACACTCAAT",3,50.86,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23Q S43Q G83W Y93D C102V S113M V153Q Y175H",8
"lib2","SARS-CoV-2","AGATTTTAGATCATAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","L5* D97I T148N",3
"lib2","SARS-CoV-2","AGATTTTAGTAATGGA",8,6.9,NA,NA,NA,NA,NA,NA,"stop","S43* C102L",2
"lib2","SARS-CoV-2","AGATTTTATAGCTTAT",13,91.09,9.4,-1.43,0.05,1.92,1.09,0,"1 nonsynonymous","A105Q",1
"lib2","SARS-CoV-2","AGATTTTATTCCAACT",4,8.94,10.76,-0.08,0.05,3,1.01,0,">1 nonsynonymous","N4H T46F L122R T148D",4
"lib2","SARS-CoV-2","AGATTTTCCACCGCGA",5,22.79,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F44G G83L A89V Y165S",4
"lib2","SARS-CoV-2","AGATTTTCTGAGGAGC",1,30.23,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y50D N58F D98N V115S Y175Q T201Q",6
"lib2","SARS-CoV-2","AGATTTTTAACAAACG",4,48.69,10.86,0.02,0.06,2.83,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","AGATTTTTACAGAGAG",6,8.28,NA,NA,NA,NA,NA,NA,"stop","G9T L131* Y143L",3
"lib2","SARS-CoV-2","AGCAAAAAAGCTATGC",14,85.52,10.83,0,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAAAAAGTCACAC",7,73.55,6.22,-4.61,0.57,1.5,1.16,0.01,">1 nonsynonymous","P96T G146L",2
"lib2","SARS-CoV-2","AGCAAAAAATAGTTGA",2,15.96,7.13,-3.7,0.3,1.51,1.13,0.02,">1 nonsynonymous","S108R P149M",2
"lib2","SARS-CoV-2","AGCAAAAACAATGTAT",1,54.9,10.84,0.01,0.07,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCAAAAACTAACCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C31S C61A F99T G174*",4
"lib2","SARS-CoV-2","AGCAAAAACTGGGAAA",2,34.89,10.67,-0.16,0.03,3,1.02,0,">1 nonsynonymous","S53L D59A",2
"lib2","SARS-CoV-2","AGCAAAAAGAGAACGC",8,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H P82L D90A",3
"lib2","SARS-CoV-2","AGCAAAAAGATTCCGA",11,112.71,9.33,-1.5,0.08,2.44,1.09,0,">1 nonsynonymous","L5R S139I T170S",3
"lib2","SARS-CoV-2","AGCAAAAAGTAGAGCC",1,44,10.69,-0.14,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAAAATACATGAC",9,47.62,8.97,-1.87,0.07,2.92,1.1,0,">1 nonsynonymous","I2L S29C Q168L",3
"lib2","SARS-CoV-2","AGCAAAAATATGAATA",6,37.02,9.72,-1.11,0.07,2.26,1,0,">1 nonsynonymous","E10W G51K",2
"lib2","SARS-CoV-2","AGCAAAAATTAACGGA",6,121.75,10.77,-0.06,0.04,2.95,1.07,0,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","AGCAAAACAGCAACTA",6,30.11,8.72,-2.12,0.38,1.5,1.14,0.06,">1 nonsynonymous","I88C V103R S139F",3
"lib2","SARS-CoV-2","AGCAAAACCTCAGGGC",13,107.59,6.69,-4.15,0.32,1.5,1.19,0.01,">1 nonsynonymous","G9K F17S P96D",3
"lib2","SARS-CoV-2","AGCAAAACGATCAAGA",8,15.28,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S19A A105I L131A P149S",4
"lib2","SARS-CoV-2","AGCAAAACTACCCCTG",2,0.72,NA,NA,NA,NA,NA,NA,"stop","A14F S36W D59* F99I V182S",5
"lib2","SARS-CoV-2","AGCAAAACTAGAACAG",1,24.53,10.8,-0.03,0.04,3,1.02,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","AGCAAAACTTAGCTGA",3,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T D112C",2
"lib2","SARS-CoV-2","AGCAAAAGTGTTGGTT",4,0,NA,NA,NA,NA,NA,NA,"stop","I2A P82*",2
"lib2","SARS-CoV-2","AGCAAAATACCTTCAA",7,15.85,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y66R D112T G174P V180S",4
"lib2","SARS-CoV-2","AGCAAAATACTACACA",25,167.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S53M D68A Y119L G155Y T170I",5
"lib2","SARS-CoV-2","AGCAAAATATCACTAT",9,62.48,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40P I80E I88Y W106K E141Q G152H",6
"lib2","SARS-CoV-2","AGCAAAATCATGCTGG",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y D59L T148S",3
"lib2","SARS-CoV-2","AGCAAAATCATGGGAA",2,32.22,8.48,-2.35,0.32,1.5,1.07,0.04,">1 nonsynonymous","V103L E154L",2
"lib2","SARS-CoV-2","AGCAAAATCTAGACTA",3,29.38,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","T46S G83P N92R",3
"lib2","SARS-CoV-2","AGCAAAATGTGAAAAT",6,80.11,9.93,-0.91,0.06,2.16,1.06,0,"1 nonsynonymous","V65N",1
"lib2","SARS-CoV-2","AGCAAAATTACCATAA",1,114.98,9.24,-1.6,0.05,2.69,1.07,0,">1 nonsynonymous","Y91V E154V",2
"lib2","SARS-CoV-2","AGCAAAATTCACTGAA",2,20.98,8.63,-2.2,0.24,1.8,1.15,0.04,">1 nonsynonymous","A14G F62L D75I A192T",4
"lib2","SARS-CoV-2","AGCAAAATTCGGCCAT",6,67.39,9.48,-1.36,0.08,1.96,1.06,0,">1 nonsynonymous","T3K C6G E10T S36T T55I",5
"lib2","SARS-CoV-2","AGCAAACAAGACGCCA",3,11.07,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","F17I T46Y I104C D137M",4
"lib2","SARS-CoV-2","AGCAAACAATTGGTGG",7,158.67,9.6,-1.24,0.07,2.16,1.04,0,">1 nonsynonymous","C6K E10K",2
"lib2","SARS-CoV-2","AGCAAACAGTGGCCTG",5,68.47,6,-4.84,2,3,1.22,0,">1 nonsynonymous","A81G N110Q P161R",3
"lib2","SARS-CoV-2","AGCAAACATAAAAAAA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib2","SARS-CoV-2","AGCAAACATCAAACCA",13,173.56,10.75,-0.09,0.07,2.81,1.14,0,"1 nonsynonymous","A190S",1
"lib2","SARS-CoV-2","AGCAAACCCAAAATCA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAACCCTAGACCT",5,63.55,10.75,-0.09,0.02,3,1,0,">1 nonsynonymous","T85L P197K",2
"lib2","SARS-CoV-2","AGCAAACCTATAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* F160S",2
"lib2","SARS-CoV-2","AGCAAACCTTACAAGG",2,22.35,10.7,-0.14,0.08,2.83,1.14,0,">1 nonsynonymous","Y39T C61S Y121F",3
"lib2","SARS-CoV-2","AGCAAACGGAAAAATA",1,3.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","AGCAAAGAGACGACAT",2,19.84,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19E D59V G146T V173T",4
"lib2","SARS-CoV-2","AGCAAAGCATCCAAGC",9,124.72,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V103T Y119D P177T",3
"lib2","SARS-CoV-2","AGCAAAGCTCACGGGT",6,11.66,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","F8A P54Y K114W F160G V180S",5
"lib2","SARS-CoV-2","AGCAAAGGGACCCATC",8,49.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46I D90L N107L E141T",4
"lib2","SARS-CoV-2","AGCAAAGGTAATACAA",4,5.21,6,-4.84,1.64,3,1.13,0.01,">1 nonsynonymous","E10K D34N Q84W T148C G155T",5
"lib2","SARS-CoV-2","AGCAAAGGTTACTAAT",16,72.98,6,-4.84,1.56,1.5,1.12,0.01,">1 nonsynonymous","A81D C102R Y119D I142A G155P F167V",6
"lib2","SARS-CoV-2","AGCAAAGTAGCAAACC",10,113.12,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","E10A C31S F70E",3
"lib2","SARS-CoV-2","AGCAAAGTCCTGCACG",11,158.97,10.87,0.04,0.06,2.91,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAAGTGGTCACAG",2,7.54,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L38I N58K A89Y P133R T170Q",5
"lib2","SARS-CoV-2","AGCAAATAAATATTAA",7,37.29,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44A K56L N120F K128F R136M V153C",6
"lib2","SARS-CoV-2","AGCAAATAAATTTCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14P P149* V173D",3
"lib2","SARS-CoV-2","AGCAAATAACTATGAT",2,76.88,10.21,-0.63,0.05,2.92,1.03,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","AGCAAATAATTACCAA",3,13.61,9.63,-1.2,0.13,1.88,1.09,0.01,">1 nonsynonymous","E141R F185P",2
"lib2","SARS-CoV-2","AGCAAATAATTTTACT",7,303.27,10.13,-0.7,0.08,2.38,1.03,0,">1 nonsynonymous","V37Q Y178R K198S",3
"lib2","SARS-CoV-2","AGCAAATACACAATTC",3,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S F126L S164W P197G",4
"lib2","SARS-CoV-2","AGCAAATACACGTTTT",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F126N L162S",3
"lib2","SARS-CoV-2","AGCAAATACCCCATAA",6,33.23,9.26,-1.57,0.19,1.72,1.12,0.02,">1 nonsynonymous","V65W N120E S164Y E186P G196V",5
"lib2","SARS-CoV-2","AGCAAATATGACTCTA",4,73.14,10.65,-0.18,0.04,2.94,1.04,0,">1 nonsynonymous","G116P F134Y F160P A192S",4
"lib2","SARS-CoV-2","AGCAAATCAAGAAGGT",1,15.39,6,-4.84,2,3,1.12,0.07,">1 nonsynonymous","Y35L G74R K94R N107L V182H",5
"lib2","SARS-CoV-2","AGCAAATCAAGGGTCA",2,60.67,10.32,-0.52,0.05,2.83,1.01,0,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","AGCAAATCATTCATCG",3,26.11,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8S N13I R73S P82W Y123V C158F",6
"lib2","SARS-CoV-2","AGCAAATCCGGAGATT",1,8.22,NA,NA,NA,NA,NA,0.09,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAATCTAGTTCCC",5,0,NA,NA,NA,NA,NA,NA,"stop","V115M S139*",2
"lib2","SARS-CoV-2","AGCAAATCTCATGGGA",10,184.62,10.89,0.06,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAATGAGGTTACG",7,94.33,9.17,-1.66,0.04,2.91,1.08,0,">1 nonsynonymous","Y119L K132L",2
"lib2","SARS-CoV-2","AGCAAATGATATCAAC",12,144.47,10.78,-0.06,0.03,2.95,1.06,0,">1 nonsynonymous","P54L K114L",2
"lib2","SARS-CoV-2","AGCAAATGCAATAGAA",1,22.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S19E T55P D98T K114L",4
"lib2","SARS-CoV-2","AGCAAATGTGATCAAA",6,33.52,6,-4.84,2,1.65,1.21,0.05,">1 nonsynonymous","I2G D34P G86P E135P",4
"lib2","SARS-CoV-2","AGCAAATGTTGAAACA",13,118.46,9.9,-0.94,0.05,2.23,1.03,0,">1 nonsynonymous","N58R I104S F134Y",3
"lib2","SARS-CoV-2","AGCAAATTACAGGCGT",4,32.09,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","P7K A42K L95T F99C A105N E141R F167Q",7
"lib2","SARS-CoV-2","AGCAAATTCAAGCGGA",2,98.01,10.89,0.06,0.05,2.95,1.07,0,">1 nonsynonymous","L5E L60R V173K",3
"lib2","SARS-CoV-2","AGCAAATTCGGTGTGC",6,47.69,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L38Q Y50T G86P F99Y E135N S200G",6
"lib2","SARS-CoV-2","AGCAAATTGTGCACGT",5,1.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88K",1
"lib2","SARS-CoV-2","AGCAACAAAACGACAC",15,7.75,NA,NA,NA,NA,NA,NA,"stop","P82* P133N",2
"lib2","SARS-CoV-2","AGCAACAAACCTGCAA",7,36.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G101D F156S",2
"lib2","SARS-CoV-2","AGCAACAACCTATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I88* N120R",2
"lib2","SARS-CoV-2","AGCAACAACGGCAATC",1,3.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","AGCAACAAGCAATATA",2,26.73,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L38W A105F R127K V173W",4
"lib2","SARS-CoV-2","AGCAACAAGTAGCAGG",1,25.76,6,-4.84,1.71,1.5,1.1,0.03,">1 nonsynonymous","A42E F62L D68L Y91V F99V V103L E141Y",7
"lib2","SARS-CoV-2","AGCAACACAACAAATA",5,31.39,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","A89R F99S",2
"lib2","SARS-CoV-2","AGCAACACATTTAACC",9,208.06,10.6,-0.24,0.03,2.98,1.04,0,"1 nonsynonymous","T46D",1
"lib2","SARS-CoV-2","AGCAACACGCTAATCT",7,135.12,10.76,-0.08,0.06,2.82,1.19,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","AGCAACACTAATAGTC",2,2.06,NA,NA,NA,NA,NA,NA,"stop","E10* R124F",2
"lib2","SARS-CoV-2","AGCAACAGGGTCGAAT",2,17.98,10.78,-0.06,0.09,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAACAGTTTCTAAA",7,70.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35C S41P I88N F185A",4
"lib2","SARS-CoV-2","AGCAACATAATTACAT",5,56.6,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10S Y50I Y91I Y143I",4
"lib2","SARS-CoV-2","AGCAACATAGAACACG",1,8.67,10.22,-0.62,0.14,3,1.03,0.01,">1 nonsynonymous","L5A N58H V173A",3
"lib2","SARS-CoV-2","AGCAACATATAAGCAG",18,253.31,10.69,-0.14,0.02,2.92,1.08,0,">1 nonsynonymous","T55G T193F",2
"lib2","SARS-CoV-2","AGCAACATATGCTTTA",4,86.96,9.71,-1.12,0.09,2,1.08,0,">1 nonsynonymous","A14K W106V",2
"lib2","SARS-CoV-2","AGCAACATGTCTGTAG",5,10.53,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","K26P A33N A81T I142H F160C",5
"lib2","SARS-CoV-2","AGCAACATTCATAACA",1,20.78,9.93,-0.91,0.12,2.1,1.11,0.01,">1 nonsynonymous","N13V K56E C61Y T201M",4
"lib2","SARS-CoV-2","AGCAACCAAACCGTTA",8,67.27,8.55,-2.28,0.11,2.13,1.1,0,">1 nonsynonymous","G9V A14R N107S F156A",4
"lib2","SARS-CoV-2","AGCAACCAAGAGAAGG",4,54.15,9.95,-0.89,0.08,2.73,1.04,0,">1 nonsynonymous","T85D G152Y",2
"lib2","SARS-CoV-2","AGCAACCACTTAAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* G146F",2
"lib2","SARS-CoV-2","AGCAACCAGACATTGC",3,50.28,8.47,-2.36,0.07,2.7,1.1,0,">1 nonsynonymous","S19N F126R",2
"lib2","SARS-CoV-2","AGCAACCATAACAATA",6,1.17,NA,NA,NA,NA,NA,NA,"stop","I2P G146*",2
"lib2","SARS-CoV-2","AGCAACCATTAAAAAT",16,155.25,8.28,-2.55,0.19,1.5,1.02,0.01,">1 nonsynonymous","G9R V182S",2
"lib2","SARS-CoV-2","AGCAACCCCAAGAAGT",2,27.66,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","A105E N151V",2
"lib2","SARS-CoV-2","AGCAACCCTCAAAAAC",2,18.49,10.24,-0.59,0.11,2.65,1,0.01,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","AGCAACCGCATATCTC",3,30.96,9.49,-1.34,0.12,1.85,1.07,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AGCAACCGGAAGACGT",3,61.5,8.55,-2.28,0.1,2.97,1.03,0,">1 nonsynonymous","V11P C61E L125H",3
"lib2","SARS-CoV-2","AGCAACGAAATTGACT",5,31.98,9.65,-1.19,0.25,1.5,1.02,0.03,">1 nonsynonymous","N1K W23R T100F",3
"lib2","SARS-CoV-2","AGCAACGAGACTGAAC",4,26.21,10.82,-0.01,0.09,2.93,1.09,0,">1 nonsynonymous","R16N V32E",2
"lib2","SARS-CoV-2","AGCAACGATTAAGAAT",5,9.06,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","F44R D68G G166W T201Y",4
"lib2","SARS-CoV-2","AGCAACGCAAACCGCA",4,81.64,8.84,-2,0.15,1.7,1.16,0.01,">1 nonsynonymous","R16T I28K S139N",3
"lib2","SARS-CoV-2","AGCAACGGAGGATTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C6F F44Y A89* G146P",4
"lib2","SARS-CoV-2","AGCAACGGCGTAGACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V Q84S P191R",3
"lib2","SARS-CoV-2","AGCAACGGTACCCATA",10,59.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59Q R124Q",2
"lib2","SARS-CoV-2","AGCAACTAATTATAAC",7,22.05,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T3H D68K",2
"lib2","SARS-CoV-2","AGCAACTACAACACAT",1,21.5,7.16,-3.68,0.29,1.5,1.15,0.04,">1 nonsynonymous","V103A L162I",2
"lib2","SARS-CoV-2","AGCAACTCTACACCAC",5,80.23,8.54,-2.3,0.13,2.04,1.07,0,">1 nonsynonymous","K26F F160I P177A",3
"lib2","SARS-CoV-2","AGCAACTGACCTAACC",5,20.65,8.13,-2.71,0.24,1.5,1,0.04,">1 nonsynonymous","T63N D90E D112L K128N K132R Q168F",6
"lib2","SARS-CoV-2","AGCAACTGATAGACAA",6,16.24,8.91,-1.92,0.22,2,1.13,0.02,">1 nonsynonymous","A33S P161G A190C",3
"lib2","SARS-CoV-2","AGCAACTTAATGGGAC",2,14.97,10.13,-0.71,0.1,2.95,1,0,">1 nonsynonymous","E141R N151I",2
"lib2","SARS-CoV-2","AGCAACTTGCAACCGT",2,60.01,9.6,-1.23,0.17,1.79,1.05,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","AGCAACTTTGCGAAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","AGCAACTTTTCGAATA",12,8.43,NA,NA,NA,NA,NA,NA,"stop","I2M A67T T85I P133*",4
"lib2","SARS-CoV-2","AGCAAGAAACATCGTA",2,13.88,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","N1P D59P S69V N107S Y143L L188M H189Y",7
"lib2","SARS-CoV-2","AGCAAGAACGAATCTA",3,11.61,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T3C S19F",2
"lib2","SARS-CoV-2","AGCAAGAATGGATTTA",12,108.32,7.68,-3.15,0.16,1.5,1.09,0.01,">1 nonsynonymous","N1R L5N G155R P161Q",4
"lib2","SARS-CoV-2","AGCAAGACCTTTGTAA",1,22.71,6,-4.84,1.62,1.5,1.11,0.03,">1 nonsynonymous","C61V A67S V103F K114S D137T",5
"lib2","SARS-CoV-2","AGCAAGACTAATGATA",1,14.53,10.82,-0.02,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAAGACTCCAGTAT",3,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V P82E V115S F134S",4
"lib2","SARS-CoV-2","AGCAAGATAACAACTT",13,97.46,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Q84R A105Y Q176R",3
"lib2","SARS-CoV-2","AGCAAGATAAGACTCT",11,111.54,10.1,-0.74,0.07,2.48,1.03,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","AGCAAGATTGTAAATT",2,35.14,7.69,-3.14,0.21,1.72,1.16,0.01,">1 nonsynonymous","E141Y Q176R",2
"lib2","SARS-CoV-2","AGCAAGCAATGCCACT",4,3.3,NA,NA,NA,NA,NA,NA,"stop","L5* T46L L57D P96L E141A",5
"lib2","SARS-CoV-2","AGCAAGCACAAACGGT",4,99.3,10.63,-0.2,0.02,2.97,1.02,0,">1 nonsynonymous","A42I P149H",2
"lib2","SARS-CoV-2","AGCAAGCACATTTCTG",21,34.62,NA,NA,NA,NA,NA,NA,"stop","T3Q R16G C61A K87L C150*",5
"lib2","SARS-CoV-2","AGCAAGCCAATGTAAC",3,109.83,10.69,-0.14,0.05,2.95,1.06,0,">1 nonsynonymous","E10R T148S P197Y",3
"lib2","SARS-CoV-2","AGCAAGCCACGACCAT",1,7.02,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","F99A W106S G117W T148E",4
"lib2","SARS-CoV-2","AGCAAGCCAGGCCCCT",4,65.73,8.21,-2.63,0.13,2.51,1.07,0.01,">1 nonsynonymous","E10K A33P G166L",3
"lib2","SARS-CoV-2","AGCAAGCCGGTCCCAT",6,29.95,6,-4.84,0.82,3,1.1,0,">1 nonsynonymous","I28Q A81Q I88R T100W",4
"lib2","SARS-CoV-2","AGCAAGCGATTCTCGG",2,40.39,10.76,-0.08,0.06,2.9,1.11,0,">1 nonsynonymous","C61T P149S",2
"lib2","SARS-CoV-2","AGCAAGCTGAAGGCTA",1,30.88,8.49,-2.34,0.24,1.5,1.16,0.02,"1 nonsynonymous","E76R",1
"lib2","SARS-CoV-2","AGCAAGGAACACCAAG",10,121.4,8.62,-2.21,0.06,2.14,1.1,0,">1 nonsynonymous","P133N T170Y",2
"lib2","SARS-CoV-2","AGCAAGGCCTGCTAGC",8,1.24,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib2","SARS-CoV-2","AGCAAGTTAGACGGTT",3,87.41,10.8,-0.04,0.05,2.93,1.09,0,">1 nonsynonymous","Y35L C61I",2
"lib2","SARS-CoV-2","AGCAAGTTCTCGAAAC",2,67.56,9.77,-1.06,0.03,2.83,1.04,0,">1 nonsynonymous","E10K G83Y G174P",3
"lib2","SARS-CoV-2","AGCAATAAAAACCTCA",3,12.96,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y66C Q84S K94M I104C Y119S G146V R179F",7
"lib2","SARS-CoV-2","AGCAATAAAATATTTA",6,52.38,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A42G R73I G83Y D90L I138E",5
"lib2","SARS-CoV-2","AGCAATAAAGAATAAT",14,148.43,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G101P L122S Q168M",3
"lib2","SARS-CoV-2","AGCAATAAGCATACTC",1,11.19,10.59,-0.25,0.09,2.95,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGCAATAAGCGTTCCG",5,40.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W F12D D97Q T170S",4
"lib2","SARS-CoV-2","AGCAATACACATACTG",2,10.59,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6D L60W V77E C102L",4
"lib2","SARS-CoV-2","AGCAATACCCGCCAAT",7,39.35,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N64L K94G G101T R127H",4
"lib2","SARS-CoV-2","AGCAATAGCTAGTAAC",8,127.03,10.81,-0.02,0.04,2.93,1.06,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","AGCAATAGTAGTCACT",9,201.5,10.86,0.03,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAATATAGATAGCT",4,51.99,10.58,-0.25,0.14,2.6,1,0.01,"1 nonsynonymous","D34C",1
"lib2","SARS-CoV-2","AGCAATATCAAAGATA",2,56.58,10.82,-0.02,0.05,2.93,1.09,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","AGCAATATCACATTGA",7,39.24,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N1P G86V",2
"lib2","SARS-CoV-2","AGCAATATGAAACTCT",2,66.36,10.48,-0.35,0.05,2.83,1.19,0,">1 nonsynonymous","N1H F156Y",2
"lib2","SARS-CoV-2","AGCAATATGTAACGAA",11,184.74,7.16,-3.68,0.25,1.52,1.14,0.01,">1 nonsynonymous","P133A Y143K",2
"lib2","SARS-CoV-2","AGCAATATTTAAAAAC",5,70.68,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T55I V77E P82L L122H",4
"lib2","SARS-CoV-2","AGCAATCAACCCGGGC",15,71.91,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L38M L95P F126S",3
"lib2","SARS-CoV-2","AGCAATCAAGTATAAA",1,55.4,8.44,-2.39,0.15,1.89,1.11,0.01,">1 nonsynonymous","I2A N107H K128S G196S",4
"lib2","SARS-CoV-2","AGCAATCAGTCGTAAT",5,22.23,10.41,-0.42,0.06,2.98,1.01,0,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","AGCAATCATATGAAGT",6,42.23,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F12N Y50C T140D T148D Y165I Y178C",6
"lib2","SARS-CoV-2","AGCAATCATCAACATA",2,71.07,9.62,-1.21,0.07,2.68,1.03,0,">1 nonsynonymous","I2H T55R S129P P169F",4
"lib2","SARS-CoV-2","AGCAATCATTAGGTAA",6,82.52,10.88,0.04,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAATCGCCACAAGG",3,2.6,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","AGCAATCTAACTCGAA",9,62.53,9.36,-1.48,0.11,1.67,1.1,0.01,"1 nonsynonymous","C49A",1
"lib2","SARS-CoV-2","AGCAATCTATGATCTC",12,158.09,9.94,-0.9,0.05,2.89,1.08,0,">1 nonsynonymous","L122S T170R",2
"lib2","SARS-CoV-2","AGCAATCTGCCTTATG",5,36.28,6,-4.84,2,1.5,1.22,0.01,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","AGCAATCTTAATCGTG",1,8.8,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D59M A81Q F99A",3
"lib2","SARS-CoV-2","AGCAATGAATTCACAG",5,1.93,NA,NA,NA,NA,NA,NA,"stop","Y50S G174*",2
"lib2","SARS-CoV-2","AGCAATGACTTCATTT",6,57.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6Q L95Q N130K",3
"lib2","SARS-CoV-2","AGCAATGAGATTCAGT",1,1.65,NA,NA,NA,NA,NA,NA,"stop","F17* Y35C Y39N L95E A105T D112S",6
"lib2","SARS-CoV-2","AGCAATGCCATCAAAT",10,94.82,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","L38N K48L W106L D137M",4
"lib2","SARS-CoV-2","AGCAATGCCCGGACCT",15,176.59,9.65,-1.19,0.06,2.33,1.06,0,">1 nonsynonymous","P96H V115D",2
"lib2","SARS-CoV-2","AGCAATGTTATTTCAA",2,35.83,10.88,0.05,0.06,2.95,1.05,0,">1 nonsynonymous","T55D T85R",2
"lib2","SARS-CoV-2","AGCAATGTTTGGAGTC",2,73.28,10.8,-0.04,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAATTATTTGCAAC",1,21.34,8.7,-2.13,0.16,1.56,1.18,0.01,">1 nonsynonymous","F99Y K128V Q144G",3
"lib2","SARS-CoV-2","AGCAATTTTAAGAATT",9,149.91,10.28,-0.56,0.03,2.97,1.03,0,">1 nonsynonymous","C6F V153Q",2
"lib2","SARS-CoV-2","AGCACAAAACTCCTGT",13,141.06,8.25,-2.58,0.13,2.26,1.08,0.01,">1 nonsynonymous","A89T G117I",2
"lib2","SARS-CoV-2","AGCACAAAATTAAACT",4,104.73,8.93,-1.91,0.06,2.92,1.05,0,">1 nonsynonymous","E10P Y143V",2
"lib2","SARS-CoV-2","AGCACAAACAGTATTA",4,0.33,NA,NA,NA,NA,NA,NA,"stop","F12C F99N L125*",3
"lib2","SARS-CoV-2","AGCACAAAGCATAATC",3,5.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R N13V F44V P82Y G116H",5
"lib2","SARS-CoV-2","AGCACAAATGAACTGT",12,55.45,6.29,-4.55,0.55,1.5,1.1,0.02,">1 nonsynonymous","C6S A89S Y175Q V181L",4
"lib2","SARS-CoV-2","AGCACAAATGAGTATA",2,0.87,NA,NA,NA,NA,NA,NA,"stop","C6V L60M R127* L183Q",4
"lib2","SARS-CoV-2","AGCACAACAAACAAAT",4,37.77,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","I88M K94Y F134L G152S",4
"lib2","SARS-CoV-2","AGCACAACGAACAACC",4,56.48,9.67,-1.16,0.09,2.13,1.06,0,"1 nonsynonymous","L38N",1
"lib2","SARS-CoV-2","AGCACAACGATTTGAA",2,62.33,10.9,0.07,0.04,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCACAAGCACTAAAC",17,162.59,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F8T S113N G152Q G172Y",4
"lib2","SARS-CoV-2","AGCACAAGCGGTAAAA",5,2.37,NA,NA,NA,NA,NA,NA,"stop","C6A S45D I88* T100Q S139I G146N G152S",7
"lib2","SARS-CoV-2","AGCACAAGCTCTAACA",3,31.13,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G101S Y119T",2
"lib2","SARS-CoV-2","AGCACACAAAGAAGGT",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R D75R W106L F160K",4
"lib2","SARS-CoV-2","AGCACACACCAAATAC",4,27.86,10.66,-0.18,0.07,2.84,1.09,0,">1 nonsynonymous","K26W Y123F",2
"lib2","SARS-CoV-2","AGCACACATAGCCCCC",9,2.96,NA,NA,NA,NA,NA,NA,"stop","N92* G174R",2
"lib2","SARS-CoV-2","AGCACACCTGACCTAG",2,181.65,7.99,-2.84,0.13,2.33,1.09,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","AGCACACTATCCCCAA",2,11.21,9.44,-1.39,0.18,2.08,1.13,0.02,">1 nonsynonymous","T15D A33L F62C A105I",4
"lib2","SARS-CoV-2","AGCACACTATTAGTAG",2,6.23,8.77,-2.06,0.97,1.5,1.02,0.07,">1 nonsynonymous","A42P V71Q",2
"lib2","SARS-CoV-2","AGCACAGAAAGTGTAT",6,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y I88P A105R P133M",4
"lib2","SARS-CoV-2","AGCACAGAATCCCTGG",2,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K G146D",2
"lib2","SARS-CoV-2","AGCACAGATTACAGAT",3,6.95,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","P82H",1
"lib2","SARS-CoV-2","AGCACAGATTACAGTA",4,14.46,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N4Y V77S I104P",3
"lib2","SARS-CoV-2","AGCACAGCTTGAAAAC",4,85.32,8.78,-2.05,0.08,2.42,1.06,0,">1 nonsynonymous","N58H K87R L162F P169R",4
"lib2","SARS-CoV-2","AGCACAGGCGATTGCG",5,83.79,10.8,-0.03,0.06,2.92,1.09,0,">1 nonsynonymous","S41P T55Q D98N I104W",4
"lib2","SARS-CoV-2","AGCACAGGTTCTTGAT",4,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E Q84M G101D W106R Y159L Y165C T170Q",7
"lib2","SARS-CoV-2","AGCACAGTAACCCGAT",11,296.18,9.84,-0.99,0.05,2.75,1.02,0,">1 nonsynonymous","C6L L122Y H189Y A192T",4
"lib2","SARS-CoV-2","AGCACAGTATCCTAAA",15,129.84,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G9L D59Y G101C N130E T201R",5
"lib2","SARS-CoV-2","AGCACATATACAACTT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","L5S C49* C61L R127L",4
"lib2","SARS-CoV-2","AGCACATCAACCAACC",3,51.23,10.92,0.09,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCACATCCACTATAA",2,21.36,10.26,-0.57,0.2,2.33,1.02,0.02,">1 nonsynonymous","A42R A105I N130M",3
"lib2","SARS-CoV-2","AGCACATGACACAACA",3,46.47,10.61,-0.23,0.06,2.81,1.17,0,">1 nonsynonymous","T3Y D98S",2
"lib2","SARS-CoV-2","AGCACATGCTTCGTCT",5,98.08,10.21,-0.63,0.07,2.65,1,0,">1 nonsynonymous","E135S G152S",2
"lib2","SARS-CoV-2","AGCACATGGAAGCCTG",2,20.26,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61Y V71G D90N I104L Q144T",5
"lib2","SARS-CoV-2","AGCACATGTCTACTTC",2,9.36,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14S W23V D34V D90V F160R",5
"lib2","SARS-CoV-2","AGCACATGTGCATAGT",3,84.88,8.05,-2.79,0.14,2.42,1.05,0.01,">1 nonsynonymous","C6Q K48T F156D",3
"lib2","SARS-CoV-2","AGCACATTATAATCAC",12,447.5,6.58,-4.26,0.27,1.5,1.11,0.01,">1 nonsynonymous","Y91L Q176D",2
"lib2","SARS-CoV-2","AGCACATTCGAAATAA",3,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S G101R",2
"lib2","SARS-CoV-2","AGCACCAATTCTACCT",3,0,NA,NA,NA,NA,NA,NA,"stop","N24* F62S G86* Q144F",4
"lib2","SARS-CoV-2","AGCACCACAAGCAATC",6,124.18,9.7,-1.13,0.08,2.53,1.04,0,">1 nonsynonymous","V11L N107R V173H",3
"lib2","SARS-CoV-2","AGCACCACACCACTTA",3,34.67,10.8,-0.04,0.05,2.96,1.06,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","AGCACCACCAAATCGG",4,13.72,6.37,-4.47,0.71,1.5,1.02,0.05,">1 nonsynonymous","A14D F62V Y165G Q176K",4
"lib2","SARS-CoV-2","AGCACCATAAACAAGC",9,162.03,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F44L F70R A89M F126A",4
"lib2","SARS-CoV-2","AGCACCATTAAAAACC",7,112.92,10.69,-0.14,0.04,2.92,1.07,0,"1 nonsynonymous","Y66M",1
"lib2","SARS-CoV-2","AGCACCCAAAGAGTTA",8,34.07,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V103K S147T E154G V173A",4
"lib2","SARS-CoV-2","AGCACCCAGTGGTCCT",2,47.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16C Q84K D90I A105S L125Y",5
"lib2","SARS-CoV-2","AGCACCCCTAAAGAGG",7,65.97,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","N30R D97Y W106R N107M K128L",5
"lib2","SARS-CoV-2","AGCACCCCTAATCCAT",2,20.8,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1F W23N E141D T170M",4
"lib2","SARS-CoV-2","AGCACCCTATTCTCGT",2,18.41,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S36F D68K C102N C158W",4
"lib2","SARS-CoV-2","AGCACCCTGGCACCAT",4,6.06,10.6,-0.24,0.34,2.72,1.21,0.05,">1 nonsynonymous","S36Y A42L A89F L162I",4
"lib2","SARS-CoV-2","AGCACCCTTATTATTA",3,48.5,10.87,0.04,0.05,2.88,1.12,0,"1 nonsynonymous","C195F",1
"lib2","SARS-CoV-2","AGCACCCTTTTAGGCT",3,41.69,10.95,0.12,0.07,2.87,1.11,0,"1 nonsynonymous","T85R",1
"lib2","SARS-CoV-2","AGCACCGAAAATATAT",3,7.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y35R T85C K94Y N107L N120Y",5
"lib2","SARS-CoV-2","AGCACCGTAAGACGCC",2,8.32,NA,NA,NA,NA,NA,NA,"stop","C6N S53* F70V",3
"lib2","SARS-CoV-2","AGCACCTAAATATGAA",6,103.49,9.51,-1.33,0.05,2.03,1.05,0,">1 nonsynonymous","G9V W106L",2
"lib2","SARS-CoV-2","AGCACCTAACACGACA",1,8.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Y L122P",2
"lib2","SARS-CoV-2","AGCACCTAATCATTTT",7,68.82,10.81,-0.03,0.04,2.98,1.04,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","AGCACCTATTCTGTAA",7,121.47,9.22,-1.61,0.05,2.88,1.11,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","AGCACCTGGTTTTGTT",1,21.18,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y35G F70M I138F T201S",4
"lib2","SARS-CoV-2","AGCACGAAAAGAGTAG",13,4.33,NA,NA,NA,NA,NA,NA,"stop","G51* R124A D137* Y165V",4
"lib2","SARS-CoV-2","AGCACGAACAGATTTA",1,31.12,10.89,0.05,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCACGAAGCACGCCA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","N30K G146* Y165L",3
"lib2","SARS-CoV-2","AGCACGACTATCAGAA",7,127.57,10.76,-0.08,0.03,2.93,1.09,0,">1 nonsynonymous","S53K G83K",2
"lib2","SARS-CoV-2","AGCACGAGAGCTCGTG",3,31.98,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A105I R127L G146L A190E",4
"lib2","SARS-CoV-2","AGCACGATAGTGCCCT",7,194.04,10.64,-0.2,0.03,2.93,1.06,0,">1 nonsynonymous","S36L G174N",2
"lib2","SARS-CoV-2","AGCACGATTATTTTAA",6,66.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2G D59V D68T Y121S N171K T201I",6
"lib2","SARS-CoV-2","AGCACGATTGTCTGGA",4,57.13,10.27,-0.56,0.08,2.87,1.13,0,">1 nonsynonymous","N1R Q144H G166N S200N",4
"lib2","SARS-CoV-2","AGCACGCGGCAGAGGT",18,5.35,NA,NA,NA,NA,NA,NA,"stop","N4W C61P D97C Y123* T148L N171H",6
"lib2","SARS-CoV-2","AGCACGCGGGACAACG",3,22.36,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9L N24H K87G R127G H189Y",5
"lib2","SARS-CoV-2","AGCACGGAGCTCGATA",6,11.29,7.23,-3.61,0.59,1.5,1.22,0.07,">1 nonsynonymous","G9L S139P N157V V173P F185H L188V",6
"lib2","SARS-CoV-2","AGCACGGATACAAAAT",8,148.58,10.31,-0.52,0.02,2.98,1.04,0,">1 nonsynonymous","Y35M A145I",2
"lib2","SARS-CoV-2","AGCACGGCCCCGCCAA",7,154.91,10.84,0.01,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCACGGGGGCCAATC",2,20.41,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","D75R T140L C150V",3
"lib2","SARS-CoV-2","AGCACGGTTATATCAG",3,57.69,8.88,-1.96,0.09,2.01,1.11,0,">1 nonsynonymous","F44I V115L G155Y P191H",4
"lib2","SARS-CoV-2","AGCACGTAGCTTAACA",4,27.47,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","P82N P169Y",2
"lib2","SARS-CoV-2","AGCACGTCTATGAGAT",8,38.5,9.71,-1.13,0.1,1.88,1.15,0,">1 nonsynonymous","T46Y I104Q",2
"lib2","SARS-CoV-2","AGCACGTGAGGATAAG",1,10.22,10.07,-0.76,0.13,2.95,1,0,">1 nonsynonymous","N24V D97Y",2
"lib2","SARS-CoV-2","AGCACGTTAAATGTAA",13,42.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N30K N92W L122D G152R",4
"lib2","SARS-CoV-2","AGCACGTTATCCTGTT",7,29.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y91L R124G",2
"lib2","SARS-CoV-2","AGCACTAAAACTCTTA",3,30.69,7.77,-3.07,0.25,1.5,1.01,0.03,">1 nonsynonymous","G9V N30R V37P W106V",4
"lib2","SARS-CoV-2","AGCACTAAACATAGTG",12,98.39,10.6,-0.24,0.05,2.91,1.06,0,">1 nonsynonymous","A18M S43T",2
"lib2","SARS-CoV-2","AGCACTAAGAATGCTA",3,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L L125S C158N G172D",4
"lib2","SARS-CoV-2","AGCACTAAGACTTCAG",15,217.34,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N120C Y165G",2
"lib2","SARS-CoV-2","AGCACTACTAATATAG",7,173.45,10.8,-0.04,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCACTAGAATGCAAG",2,62.62,10.73,-0.11,0.05,2.91,1.09,0,"1 nonsynonymous","V115F",1
"lib2","SARS-CoV-2","AGCACTAGCATAAGGG",4,29.24,6.96,-3.87,0.31,1.5,1.03,0.02,">1 nonsynonymous","D97H S108N Y143L F160S V173L",5
"lib2","SARS-CoV-2","AGCACTAGTTCAACAC",10,83.98,9.8,-1.03,0.09,2.11,1.01,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","AGCACTCAAACCGACT",4,11.55,10.62,-0.21,0.17,2.79,1.17,0.01,">1 nonsynonymous","Y39I S129R I138A",3
"lib2","SARS-CoV-2","AGCACTCATGATACAA",8,104.13,10.19,-0.65,0.07,2.84,1.02,0,">1 nonsynonymous","G9V C61I K128Y",3
"lib2","SARS-CoV-2","AGCACTCCAACTTCCA",10,107.25,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","D68G T100L W106Q",3
"lib2","SARS-CoV-2","AGCACTCCTTATTCAG",3,33.77,10.92,0.08,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCACTCGTCTACACG",7,49.79,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N120T R127I",2
"lib2","SARS-CoV-2","AGCACTGAATTATAAA",7,71.61,10.73,-0.11,0.06,2.89,1.11,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","AGCACTGCTCGAACAT",33,168.54,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K94S N109A N118H C158V G166R",5
"lib2","SARS-CoV-2","AGCACTGGAGGATCTG",3,83.64,10.88,0.05,0.05,2.99,1.03,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","AGCACTGTCAAACAAT",1,13.6,8.95,-1.88,0.19,1.88,1.13,0.02,">1 nonsynonymous","R78L L122G E135S F185W",4
"lib2","SARS-CoV-2","AGCACTTAAACTATAC",1,25.1,9.7,-1.13,0.09,2.02,1.01,0,">1 nonsynonymous","N4K N24C T100S N151T",4
"lib2","SARS-CoV-2","AGCACTTAAAGAATTA",1,5.07,10.47,-0.37,0.2,2.71,1.32,0.01,">1 nonsynonymous","P7K Y39A",2
"lib2","SARS-CoV-2","AGCACTTATTTTCCGA",2,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V E154V E186I",3
"lib2","SARS-CoV-2","AGCACTTCATAGAACG",1,12.6,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S19E K48S D90R",3
"lib2","SARS-CoV-2","AGCACTTGATGCAAAT",8,158.68,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37Y N92H",2
"lib2","SARS-CoV-2","AGCAGAAAACTTAGGA",3,36.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2C A22E R127L",3
"lib2","SARS-CoV-2","AGCAGAAAATACTCTA",11,237.42,8.77,-2.07,0.07,2.04,1.08,0,">1 nonsynonymous","P54T Y165I",2
"lib2","SARS-CoV-2","AGCAGAAAATTTATAG",2,13.03,6.72,-4.12,0.26,2.42,1.18,0.02,">1 nonsynonymous","S41C S45C S53L K87D L95I S129V",6
"lib2","SARS-CoV-2","AGCAGAAACACCCACC",6,44.46,10.79,-0.04,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAGAAACTTCTATA",1,18.32,9.93,-0.91,0.08,2.8,1.18,0,">1 nonsynonymous","T46Q C61L E154L",3
"lib2","SARS-CoV-2","AGCAGAAAGAAATCAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q V37D G86F T140W P169S",5
"lib2","SARS-CoV-2","AGCAGAAATAGGGTTG",6,68.91,10.42,-0.41,0.06,3,1,0,">1 nonsynonymous","A33P P133A",2
"lib2","SARS-CoV-2","AGCAGAAATTTTGGCA",5,81.14,7,-3.84,0.18,1.86,1.12,0.01,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","AGCAGAACATTCGAGG",31,5.01,NA,NA,NA,NA,NA,NA,"stop","V71W V103* Y123I",3
"lib2","SARS-CoV-2","AGCAGAAGCACATCAG",3,72.84,10.63,-0.21,0.05,2.93,1.04,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","AGCAGAAGTATGTCCG",1,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H V103L F134L",3
"lib2","SARS-CoV-2","AGCAGAATAAAATGCA",9,112.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9S Y93L D112P G166S",4
"lib2","SARS-CoV-2","AGCAGAATCACTTCAG",12,167.4,10.8,-0.04,0.04,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAGACAAAATCAAT",7,176.26,10.11,-0.73,0.04,2.95,1.05,0,">1 nonsynonymous","K87Q D98Q",2
"lib2","SARS-CoV-2","AGCAGACCATCTGATT",3,34.51,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D68Q I142W G174V",3
"lib2","SARS-CoV-2","AGCAGACCTGTAATTT",7,22.38,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","W23S F47N G101I",3
"lib2","SARS-CoV-2","AGCAGACGTAATTGTG",2,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E T201C",2
"lib2","SARS-CoV-2","AGCAGACTAAACTAAT",10,161.99,10.77,-0.07,0.03,2.94,1.09,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","AGCAGACTAAATCTCA",2,40.23,10.71,-0.12,0.02,2.98,1,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","AGCAGACTTGATAACT",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M W106D Q168A",3
"lib2","SARS-CoV-2","AGCAGAGTACAAAATG",2,31.81,10.3,-0.54,0.06,2.85,1.02,0,">1 nonsynonymous","D34E S147Y",2
"lib2","SARS-CoV-2","AGCAGAGTGTGAACCC",5,27.36,8.87,-1.97,0.21,1.65,1.17,0.02,">1 nonsynonymous","P54R N110S D137H",3
"lib2","SARS-CoV-2","AGCAGATACATACAAT",2,26.59,10.75,-0.09,0.07,3,1.07,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","AGCAGATATGAACTAG",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K S36L T63F P82E T100M A105P F156K",7
"lib2","SARS-CoV-2","AGCAGATGATAGGAAT",1,13.7,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N40Y D97R P161F L162I",4
"lib2","SARS-CoV-2","AGCAGATGGACTTTGA",18,4.17,NA,NA,NA,NA,NA,NA,"stop","A14* S43A N64V R127P D137* G155V",6
"lib2","SARS-CoV-2","AGCAGCAAACACACTA",6,92.64,10.79,-0.05,0.06,2.91,1.07,0,"1 nonsynonymous","Q144M",1
"lib2","SARS-CoV-2","AGCAGCAAAGATAAAT",4,45.27,10.32,-0.52,0.05,3,1,0,">1 nonsynonymous","F62S K87N",2
"lib2","SARS-CoV-2","AGCAGCAAAGGAGATA",5,205.09,10.67,-0.17,0.03,2.94,1.04,0,"1 nonsynonymous","A67V",1
"lib2","SARS-CoV-2","AGCAGCAACGCTAGTT",4,65.18,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G9A V77L T85M K94P",4
"lib2","SARS-CoV-2","AGCAGCATAAAAAACT",2,36.1,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y39I T46L T63Y K114D P161C Q168S",6
"lib2","SARS-CoV-2","AGCAGCATTAACGGAG",11,112.82,10.43,-0.41,0.05,2.74,1.13,0,">1 nonsynonymous","N110I Q144P",2
"lib2","SARS-CoV-2","AGCAGCCAAACGACCA",7,82,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T100H S139L Y143A P161A",4
"lib2","SARS-CoV-2","AGCAGCCCCAATCCAG",8,63.58,8.72,-2.12,0.15,1.5,1.15,0.01,"1 nonsynonymous","I104Q",1
"lib2","SARS-CoV-2","AGCAGCCTATTAGGAA",3,41.09,10.82,-0.01,0.07,2.98,1.05,0,">1 nonsynonymous","L5F Y39T",2
"lib2","SARS-CoV-2","AGCAGCCTCGCGAGTG",4,0.31,NA,NA,NA,NA,NA,NA,"stop","F47* Y91V",2
"lib2","SARS-CoV-2","AGCAGCGATCTAACCC",3,54.91,9.26,-1.57,0.1,2.33,1.02,0.01,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","AGCAGCGCAATACCAA",1,14.31,6.61,-4.23,0.54,1.5,1.18,0.04,">1 nonsynonymous","C49T L60P",2
"lib2","SARS-CoV-2","AGCAGCTAAGTGCCTA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A L122M L131N",3
"lib2","SARS-CoV-2","AGCAGCTAGACCTACA",4,17.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3C G9M A81H T170C",4
"lib2","SARS-CoV-2","AGCAGCTCCAACATTC",14,82.52,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S19I S45C E154L",3
"lib2","SARS-CoV-2","AGCAGCTGCCCCTGGT",13,135.68,8.1,-2.74,0.16,1.5,1.07,0.01,">1 nonsynonymous","N1D D98Y N157L",3
"lib2","SARS-CoV-2","AGCAGGAACGCTACCT",4,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I W23T E141H L183D",4
"lib2","SARS-CoV-2","AGCAGGAACGTGGCGC",8,82.42,10.51,-0.33,0.04,2.96,1.04,0,"1 nonsynonymous","S19A",1
"lib2","SARS-CoV-2","AGCAGGACAATTACTT",8,74.06,10.48,-0.36,0.04,2.94,1.04,0,">1 nonsynonymous","F44T L122Y T148F",3
"lib2","SARS-CoV-2","AGCAGGACACGAACAA",2,42.89,10.84,0,0.04,2.97,1.07,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","AGCAGGACGTTAGCGT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","D59F L95Q G101* C150S F160G",5
"lib2","SARS-CoV-2","AGCAGGAGAAACAAAT",8,93.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V32C N58M S69T N92F",4
"lib2","SARS-CoV-2","AGCAGGAGACTACCGG",3,43.46,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N13D W23A D112C",3
"lib2","SARS-CoV-2","AGCAGGAGAGAGAATG",9,75.53,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T3R W23L I28G D59N S200M",5
"lib2","SARS-CoV-2","AGCAGGAGTACTACAA",2,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E S19T C61E Y93V I104M",5
"lib2","SARS-CoV-2","AGCAGGATTAGAAACT",9,178.01,9.54,-1.3,0.03,2.88,1.07,0,">1 nonsynonymous","S53C Q168G A190H",3
"lib2","SARS-CoV-2","AGCAGGCTAGAGCCGG",18,289.97,10.26,-0.57,0.02,2.93,1.05,0,">1 nonsynonymous","C6Q L122G",2
"lib2","SARS-CoV-2","AGCAGGCTGTGAAGGG",1,80.31,9.59,-1.25,0.07,2.84,1.08,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","AGCAGGGTGGTGTGAT",6,56.24,10.53,-0.3,0.07,2.88,1.11,0,">1 nonsynonymous","V77L G146A",2
"lib2","SARS-CoV-2","AGCAGGTAAAAATTCA",13,131.91,10.38,-0.45,0.05,2.89,1.05,0,">1 nonsynonymous","S45K S147L",2
"lib2","SARS-CoV-2","AGCAGGTAAAATACCA",11,106.07,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F44D I72D",2
"lib2","SARS-CoV-2","AGCAGGTGAATGATAA",11,20.86,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","D34I Y50A D112Y",3
"lib2","SARS-CoV-2","AGCAGGTGGTCTATTG",9,190.19,10.44,-0.39,0.05,2.94,1.05,0,">1 nonsynonymous","F47V K56L",2
"lib2","SARS-CoV-2","AGCAGGTTAGCTATCC",1,7.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2P T15S T63N G83S D97K E135W",6
"lib2","SARS-CoV-2","AGCAGTAAAACTCATA",5,41.75,10.92,0.09,0.08,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAGTAAACATCAAT",4,0.34,NA,NA,NA,NA,NA,NA,"stop","N1G C6* C61R Q168M",4
"lib2","SARS-CoV-2","AGCAGTAAGCAGTAGG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","R27M Y91C D112H K128*",4
"lib2","SARS-CoV-2","AGCAGTACGATAAACA",4,64.45,6,-4.84,2,3,1.13,0,">1 nonsynonymous","D98P N107K Y159M",3
"lib2","SARS-CoV-2","AGCAGTAGTCCTCAAA",5,8.99,9.71,-1.13,0.22,2.04,1.08,0.02,">1 nonsynonymous","L60G S139Y",2
"lib2","SARS-CoV-2","AGCAGTATAAACAAAA",10,39.8,7.58,-3.26,0.3,1.5,1.12,0.02,">1 nonsynonymous","E10K A33M N107H P149T",4
"lib2","SARS-CoV-2","AGCAGTATATGATAAA",3,14.26,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6Q A14D F99S N107T G174L L188H",6
"lib2","SARS-CoV-2","AGCAGTATATTATCAG",1,58.57,8.91,-1.93,0.05,2.92,1.08,0,">1 nonsynonymous","Y39D L60H Y119S F160Y",4
"lib2","SARS-CoV-2","AGCAGTCACCATCCCT",8,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T A33N D59M P96A I104P",5
"lib2","SARS-CoV-2","AGCAGTCATTTACTCC",7,31.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","AGCAGTCCCATTAAGG",1,25.63,9.05,-1.79,0.1,2.84,1.09,0.01,">1 nonsynonymous","Y119S S129L F160H",3
"lib2","SARS-CoV-2","AGCAGTCCTATAGACT",1,17.84,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A14V A42V P96K V153D",4
"lib2","SARS-CoV-2","AGCAGTCGCTATGAAT",7,30.91,7.98,-2.86,0.36,1.5,1.16,0.04,">1 nonsynonymous","S53T T100P",2
"lib2","SARS-CoV-2","AGCAGTGAACTGATAC",2,22.14,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L38R A145P",2
"lib2","SARS-CoV-2","AGCAGTGGAAGCACAA",8,83.82,9.66,-1.18,0.08,2.28,1.04,0,">1 nonsynonymous","D98H R136A T201E",3
"lib2","SARS-CoV-2","AGCAGTGGCCACCAAA",3,53.48,10.8,-0.03,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCAGTGGTTAATCAC",6,137.2,10.42,-0.41,0.04,2.82,1.06,0,">1 nonsynonymous","A33N S43R P149V L188I",4
"lib2","SARS-CoV-2","AGCAGTTACTTAGTGT",6,123.24,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S36K C49R V173S",3
"lib2","SARS-CoV-2","AGCAGTTGATATGACA",4,49.52,8.78,-2.06,0.11,2.48,1.03,0,">1 nonsynonymous","L162F P169V",2
"lib2","SARS-CoV-2","AGCAGTTTATCACATT",1,19.27,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","I88Y D112C",2
"lib2","SARS-CoV-2","AGCAGTTTCGGTGCCG",7,72.52,8.76,-2.08,0.14,1.5,1.02,0.01,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","AGCAGTTTTATACGAC",3,105.54,8.5,-2.33,0.14,2.55,1.06,0.01,">1 nonsynonymous","F44R Y119H G166L",3
"lib2","SARS-CoV-2","AGCATAAAACCGTCAA",2,1.36,NA,NA,NA,NA,NA,NA,"stop","S36Y F62P T100* G155R",4
"lib2","SARS-CoV-2","AGCATAAAGACCAGTT",15,109.78,7.89,-2.95,0.17,1.5,1.12,0.01,">1 nonsynonymous","Y35T A81R Y121I",3
"lib2","SARS-CoV-2","AGCATAAATCTCCAAG",10,93.28,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y66S P96F G117R S129L S164G",5
"lib2","SARS-CoV-2","AGCATAACCATCTGCC",8,83.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D98Y N107R Y121A L131S V173D",5
"lib2","SARS-CoV-2","AGCATAACCATGAGAT",2,12.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138D R179G K199I",3
"lib2","SARS-CoV-2","AGCATAACCCAAAATT",3,152.77,10.18,-0.65,0.04,2.86,1.06,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","AGCATAACTAAACTTA",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R G51I L60M T100K T170I V173G",6
"lib2","SARS-CoV-2","AGCATAACTAAATTTC",1,67.22,10.7,-0.14,0.02,2.95,1.06,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","AGCATAATAATGAATG",4,69.09,10.1,-0.74,0.06,2.42,1.09,0,"1 nonsynonymous","W23P",1
"lib2","SARS-CoV-2","AGCATAATATGTGGGA",1,13.32,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5H F47V I104R S129T F167A T201L",6
"lib2","SARS-CoV-2","AGCATAATCCTACCGA",7,95.69,10.37,-0.46,0.04,2.89,1.05,0,">1 nonsynonymous","N64P V115Y L122I",3
"lib2","SARS-CoV-2","AGCATAATGAGACGCC",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G G86R L95H P149T",4
"lib2","SARS-CoV-2","AGCATAATTCAAGACG",6,52.87,10.83,0,0.05,3,1.02,0,">1 nonsynonymous","I2M Y39T",2
"lib2","SARS-CoV-2","AGCATACAAATCAGTC",3,1.71,NA,NA,NA,NA,NA,NA,"stop","S19Q T55* R127L Q144T Y159V",5
"lib2","SARS-CoV-2","AGCATACAAGGATAAG",8,121.37,10.81,-0.03,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCATACCGTGAATGA",6,5.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V103N D137L",2
"lib2","SARS-CoV-2","AGCATACTAAGCGTCT",1,17.53,10.94,0.11,0.07,2.99,1.03,0,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","AGCATACTAATCACCT",2,25.09,9.83,-1.01,0.18,2.49,1.17,0.01,">1 nonsynonymous","Y35E S139I",2
"lib2","SARS-CoV-2","AGCATACTCGCAATCA",2,37.12,9.2,-1.63,0.08,2.23,1.15,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","AGCATACTGAATTTTC",23,97.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S43P F70I",2
"lib2","SARS-CoV-2","AGCATACTTTTAGTAA",4,52.9,9.01,-1.83,0.22,1.88,1.28,0.02,">1 nonsynonymous","N58L D90I",2
"lib2","SARS-CoV-2","AGCATAGAAAGCACCT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I Y123M",2
"lib2","SARS-CoV-2","AGCATAGAACGACCGC",5,38.28,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N58L V77D R136S",3
"lib2","SARS-CoV-2","AGCATAGACCACGTCA",3,8.93,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","E10F P54G C61M D90A F185A",5
"lib2","SARS-CoV-2","AGCATAGACCTAGAAT",2,33.78,10.81,-0.03,0.06,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCATAGCATAGACCA",3,6697.05,9.32,-1.52,0.04,2.76,1.04,0,">1 nonsynonymous","N118I T201R",2
"lib2","SARS-CoV-2","AGCATAGCCTGAGCGG",7,0.51,NA,NA,NA,NA,NA,NA,"stop","C6H Y91S I142P L162* N171Y",5
"lib2","SARS-CoV-2","AGCATAGCTGTCTCTG",10,75.39,8.1,-2.73,0.12,1.5,1.1,0.01,">1 nonsynonymous","G86H K128F",2
"lib2","SARS-CoV-2","AGCATAGTACCAAGAA",3,91.15,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","P7L R25S T46P",3
"lib2","SARS-CoV-2","AGCATAGTTGTTACGA",11,48.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106S C150P",2
"lib2","SARS-CoV-2","AGCATATAACTAAGAA",2,49.44,10.76,-0.07,0.06,2.9,1.02,0,">1 nonsynonymous","G51N N151R",2
"lib2","SARS-CoV-2","AGCATATAAGCATACC",5,90.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38C N110D Q144R N157L F167L",5
"lib2","SARS-CoV-2","AGCATATATAAATTTA",1,9.4,10.46,-0.38,0.1,2.86,1.03,0,">1 nonsynonymous","G174L K198M",2
"lib2","SARS-CoV-2","AGCATATATATAAATA",1,14.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I80R Q163K",2
"lib2","SARS-CoV-2","AGCATATCAAGCCCAG",21,6.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24K Y91V W106I G146Y Q163Y",5
"lib2","SARS-CoV-2","AGCATATCGGATATCT",2,40.89,10.83,-0.01,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCATATCTAATGGTG",10,216.71,9.72,-1.12,0.03,2.92,1.09,0,">1 nonsynonymous","T148K T170F T201C",3
"lib2","SARS-CoV-2","AGCATATCTGAGTACC",4,52.87,10.68,-0.16,0.03,2.97,1.05,0,"1 nonsynonymous","S184K",1
"lib2","SARS-CoV-2","AGCATATGACGCTGAC",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K N13V A42W T100S",4
"lib2","SARS-CoV-2","AGCATATGGAAGACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* R78I I88Q T140R T170*",5
"lib2","SARS-CoV-2","AGCATATGTAAAGTAT",3,47.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86V S113P Y121R",3
"lib2","SARS-CoV-2","AGCATATTACCAAAAT",4,61.4,10.57,-0.27,0.05,2.92,1.08,0,">1 nonsynonymous","L5R K56A F160V",3
"lib2","SARS-CoV-2","AGCATATTAGAGAGTT",11,145.73,10.29,-0.55,0.03,2.9,1.04,0,">1 nonsynonymous","E10S G152Y",2
"lib2","SARS-CoV-2","AGCATATTAGCAATCG",5,1.8,NA,NA,NA,NA,NA,NA,"stop","T3* P82V",2
"lib2","SARS-CoV-2","AGCATATTATAAGATA",5,122.68,10.31,-0.52,0.03,2.88,1.06,0,">1 nonsynonymous","I2V L38W S129G V173L K199L",5
"lib2","SARS-CoV-2","AGCATATTTCAACCTA",4,49.89,10.72,-0.11,0.05,2.98,1.01,0,">1 nonsynonymous","L187E C195S",2
"lib2","SARS-CoV-2","AGCATATTTCACCAGC",11,44.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S45R R124S S139H G146W",4
"lib2","SARS-CoV-2","AGCATCAAAACTCATC",1,27.11,9.15,-1.69,0.07,2.94,1.04,0,">1 nonsynonymous","D75N T170L",2
"lib2","SARS-CoV-2","AGCATCAAAAGTACTA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","F70L Y123* K199N",3
"lib2","SARS-CoV-2","AGCATCAACCATCACC",8,68.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44Y G86V Q144K T201S",4
"lib2","SARS-CoV-2","AGCATCAAGTTGAACC",11,176.85,10.62,-0.21,0.03,2.95,1.05,0,">1 nonsynonymous","I2A A67V",2
"lib2","SARS-CoV-2","AGCATCACATAGCTAT",7,0.06,NA,NA,NA,NA,NA,NA,"stop","S45T T63* I72K D98T V103M N110L C158L",7
"lib2","SARS-CoV-2","AGCATCATTTATAAAC",1,2.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","AGCATCCAAGGCGGGC",14,0.59,NA,NA,NA,NA,NA,NA,"stop","Y21R N30* Y119V",3
"lib2","SARS-CoV-2","AGCATCCAGATGACCT",3,60.09,10.08,-0.76,0.04,2.84,1,0,">1 nonsynonymous","S36V S43L Y123A A190S",4
"lib2","SARS-CoV-2","AGCATCCATTACGCTA",1,37.13,10.76,-0.08,0.06,2.99,1.07,0,"1 nonsynonymous","L60A",1
"lib2","SARS-CoV-2","AGCATCCTTACCGGGA",13,108.76,8.16,-2.68,0.17,1.93,1.09,0.01,">1 nonsynonymous","F12R V37F Y119S L188S",4
"lib2","SARS-CoV-2","AGCATCGAAGTCATAG",2,10.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103E G146V",2
"lib2","SARS-CoV-2","AGCATCTAGGAGGTAA",2,2.34,NA,NA,NA,NA,NA,NA,"stop","K26L Y66M S129* P149Q R179C K198Q",6
"lib2","SARS-CoV-2","AGCATCTAGTAACCTA",3,4.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","AGCATCTCGTACTGAG",9,5.29,NA,NA,NA,NA,NA,NA,"stop","S45* P82R K132S L162S P169R V194E T201E",7
"lib2","SARS-CoV-2","AGCATGAACAGGCACT",5,2.12,NA,NA,NA,NA,NA,NA,"stop","I80R K87* E141K P161R Y178G",5
"lib2","SARS-CoV-2","AGCATGAATAAACTCA",11,153.57,10.56,-0.27,0.04,2.88,1.07,0,">1 nonsynonymous","N109L N120S S200V",3
"lib2","SARS-CoV-2","AGCATGAATGACTTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I142S T201*",2
"lib2","SARS-CoV-2","AGCATGAGGTCCGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y Y50S L95Q V103N D112R",5
"lib2","SARS-CoV-2","AGCATGAGTAAAGGAG",3,26.96,10.68,-0.15,0.07,2.87,1.14,0,">1 nonsynonymous","Y39S L60C T148E",3
"lib2","SARS-CoV-2","AGCATGATGAATTATA",19,79.99,8.1,-2.73,0.28,1.5,1.05,0.03,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","AGCATGATTACCAATA",5,35.86,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6G F62A G116L F134L C150H",5
"lib2","SARS-CoV-2","AGCATGCAACCCGGCT",6,137.01,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R25V A67I F134C N151L",4
"lib2","SARS-CoV-2","AGCATGCAAGATACAT",3,38.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25G S36L L183Q",3
"lib2","SARS-CoV-2","AGCATGCCCAGACCTA",12,58.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P96M L122V C158L",3
"lib2","SARS-CoV-2","AGCATGGAAATTATTC",1,25.99,9.94,-0.89,0.11,2.57,1.12,0.01,">1 nonsynonymous","A33R S41C N64T",3
"lib2","SARS-CoV-2","AGCATGGACTAGCGAC",6,163.59,6,-4.84,0.71,1.5,1.13,0.01,">1 nonsynonymous","N30M Y39A Y143G",3
"lib2","SARS-CoV-2","AGCATGGCCCTGTACC",10,95.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F12L S36L P96F W106V Y121N",5
"lib2","SARS-CoV-2","AGCATGGGCACCTATA",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N92D L95G D98N",4
"lib2","SARS-CoV-2","AGCATGTAAAAGAATT",3,29.56,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V11F R73E P169L Y175M",4
"lib2","SARS-CoV-2","AGCATGTATGTACAGC",6,288.8,9.83,-1.01,0.07,2.6,1.01,0,">1 nonsynonymous","E10S C31A N120M I138L",4
"lib2","SARS-CoV-2","AGCATGTCACAAACCT",2,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74R Q144Y V173W V181T",4
"lib2","SARS-CoV-2","AGCATGTGAATAATAT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","S43T T100Y S164* R179F",4
"lib2","SARS-CoV-2","AGCATGTGCTGCTAGT",8,1.62,NA,NA,NA,NA,NA,NA,"stop","N107C K128A S184* T201F",4
"lib2","SARS-CoV-2","AGCATGTGCTGTGGTG",2,38.73,10.36,-0.48,0.07,2.95,1.06,0,"1 nonsynonymous","K87W",1
"lib2","SARS-CoV-2","AGCATGTGTCGTTTGT",2,17.08,6.04,-4.8,0.76,1.5,1.15,0.02,"1 nonsynonymous","A67D",1
"lib2","SARS-CoV-2","AGCATTAAAGCACCCA",2,42.3,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","W106R E141W Y175R",3
"lib2","SARS-CoV-2","AGCATTAAGAATATCC",2,1.54,NA,NA,NA,NA,NA,NA,"stop","N1Y T55V D97* N107L",4
"lib2","SARS-CoV-2","AGCATTACCGTCCTCA",5,3.72,NA,NA,NA,NA,NA,NA,"stop","C6T S19G L60C L122*",4
"lib2","SARS-CoV-2","AGCATTACGAGAACCA",2,22.03,8.97,-1.86,0.19,1.61,1.01,0.02,">1 nonsynonymous","T3V S19M L60G N130L",4
"lib2","SARS-CoV-2","AGCATTAGACGACAAA",5,65.87,10.95,0.11,0.05,2.87,1.13,0,"1 nonsynonymous","S147H",1
"lib2","SARS-CoV-2","AGCATTAGTACTAATC",4,3.1,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","AGCATTATGATTTCCT",3,21.65,10.7,-0.14,0.07,2.97,1.06,0,">1 nonsynonymous","L5D T15Y V32K L122S",4
"lib2","SARS-CoV-2","AGCATTATGCTTAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61P F70* G83A",3
"lib2","SARS-CoV-2","AGCATTATTTCTCTTA",6,33.04,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","S41E N107H S113P",3
"lib2","SARS-CoV-2","AGCATTATTTTGACAT",1,10.51,10.95,0.11,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCATTCAGATAACTG",8,121.17,10.78,-0.05,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCATTCCAATTGTCT",3,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31F D97A A105L",3
"lib2","SARS-CoV-2","AGCATTCGAAAAATCT",7,0.29,NA,NA,NA,NA,NA,NA,"stop","V32P A42R K87V C150* A192R",5
"lib2","SARS-CoV-2","AGCATTCTAAACTTAT",2,86.07,7.8,-3.04,0.14,1.5,1.13,0.01,"1 nonsynonymous","R179Q",1
"lib2","SARS-CoV-2","AGCATTCTATTTATCT",22,308.65,11.12,0.29,0.04,2.95,1.06,0,"1 nonsynonymous","Q168Y",1
"lib2","SARS-CoV-2","AGCATTGACATATTAC",3,8.73,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","G9L D68H K87S R179G",4
"lib2","SARS-CoV-2","AGCATTGACCAACTTT",8,142.92,8.56,-2.28,0.06,2.83,1.06,0,">1 nonsynonymous","D98P G166L",2
"lib2","SARS-CoV-2","AGCATTGAGTTAGATT",4,70.74,10.74,-0.09,0.06,2.9,1.11,0,"1 nonsynonymous","Y66V",1
"lib2","SARS-CoV-2","AGCATTGCATTCGTAG",4,25.91,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S19K C61S P96K G101E",4
"lib2","SARS-CoV-2","AGCATTGCTAGTGACT",11,99.18,10.09,-0.74,0.08,2.35,1.03,0,">1 nonsynonymous","V11S V153Q",2
"lib2","SARS-CoV-2","AGCATTGCTCCGATAT",6,15.74,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C61S N92T S113L Y119P",4
"lib2","SARS-CoV-2","AGCATTGTAGCCTTTT",2,44.17,10.66,-0.17,0.06,2.93,1.09,0,"1 nonsynonymous","Y178N",1
"lib2","SARS-CoV-2","AGCATTGTTGAATATT",2,11.89,8.78,-2.06,0.14,2.09,1.05,0.01,">1 nonsynonymous","F8T G155E",2
"lib2","SARS-CoV-2","AGCATTTAAAATTGCT",6,2.91,NA,NA,NA,NA,NA,NA,"stop","A22* C49L G86L E135L",4
"lib2","SARS-CoV-2","AGCATTTAAACTTAGA",5,12.83,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","G51N N58T Y91L P96S D98Y T100H I142V",7
"lib2","SARS-CoV-2","AGCATTTACCAAAGAC",3,24.77,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F12R D137R H189R",3
"lib2","SARS-CoV-2","AGCATTTATAAGCCAC",4,27.74,8.12,-2.72,0.25,1.63,1.13,0.02,">1 nonsynonymous","L60A N107I",2
"lib2","SARS-CoV-2","AGCATTTCCTAACCCA",2,6.98,6.08,-4.75,0.63,3,1.01,0,">1 nonsynonymous","I2W N107F Q168D",3
"lib2","SARS-CoV-2","AGCATTTTGCGAGTAT",4,0.31,NA,NA,NA,NA,NA,NA,"stop","G86S P133* K199T",3
"lib2","SARS-CoV-2","AGCCAAAAAACTCCCC",5,24.5,6.63,-4.21,0.56,1.91,1.2,0.05,">1 nonsynonymous","S29G T55L S69H D137Y",4
"lib2","SARS-CoV-2","AGCCAAAAACCATTGG",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S R25Y G117A",3
"lib2","SARS-CoV-2","AGCCAAAAAGACCTCT",2,9.08,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","S41H K87D P149Y C150F",4
"lib2","SARS-CoV-2","AGCCAAAACATGATTT",3,23.2,7.26,-3.58,0.44,1.5,1,0.06,">1 nonsynonymous","D34V N64R Y121S P149L",4
"lib2","SARS-CoV-2","AGCCAAAACCAATACT",4,27.82,9.2,-1.64,0.06,2.85,1.07,0,"1 nonsynonymous","G117M",1
"lib2","SARS-CoV-2","AGCCAAAATTCGCCCT",2,40.07,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","S36V C49L K198E",3
"lib2","SARS-CoV-2","AGCCAAACAGATGCGA",5,104.91,10.99,0.15,0.07,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCAAATAACCCTTA",4,90.76,10.88,0.04,0.05,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCCAAATAATACACC",3,23.1,10.71,-0.13,0.04,2.97,1.04,0,">1 nonsynonymous","L5R C61P",2
"lib2","SARS-CoV-2","AGCCAAATCATCGTGA",5,0.69,NA,NA,NA,NA,NA,NA,"stop","S36* V52F C61T P149A Y159C",5
"lib2","SARS-CoV-2","AGCCAAATGAACTCAT",11,36.75,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L60V V181E",2
"lib2","SARS-CoV-2","AGCCAACATTTACTTT",1,23.25,11.08,0.25,0.06,3,1,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","AGCCAACCAGTCTCCT",2,20.3,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","I88P K114G L122E",3
"lib2","SARS-CoV-2","AGCCAACGAACTACCT",2,83.02,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","F17R Y159S",2
"lib2","SARS-CoV-2","AGCCAACGCTGGCCAA",3,52.6,10.14,-0.7,0.36,1.5,1,0.07,">1 nonsynonymous","L5W S43R G86M Y119A N151F",5
"lib2","SARS-CoV-2","AGCCAACGGGATTATA",1,18.36,10.74,-0.09,0.08,3,1,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","AGCCAACTATGAAAAC",4,0.08,NA,NA,NA,NA,NA,NA,"stop","T63E C102I N120* T140H",4
"lib2","SARS-CoV-2","AGCCAACTCAAATGAT",6,27.35,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P7L A14L D34S Y175Q V181P",5
"lib2","SARS-CoV-2","AGCCAACTCGCTTGTC",9,48.47,8.07,-2.77,0.24,1.5,1.08,0.03,"1 nonsynonymous","R179S",1
"lib2","SARS-CoV-2","AGCCAAGACCACTTAC",8,91.26,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","T3R L38M K94V Y123E Y175C",5
"lib2","SARS-CoV-2","AGCCAAGATGACATAA",5,162.13,6,-4.84,2,3,1.17,0,"1 nonsynonymous","P177N",1
"lib2","SARS-CoV-2","AGCCAAGCCATCCATT",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I Y21R D90S N118G G172V P197T",6
"lib2","SARS-CoV-2","AGCCAAGCTCAGACTA",2,20.22,10.84,0.01,0.07,3,1,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","AGCCAAGGCGCTGCGC",3,82.04,6.86,-3.98,0.21,1.5,1.15,0.01,"1 nonsynonymous","C158G",1
"lib2","SARS-CoV-2","AGCCAAGTACGCAGAT",2,13.99,7.75,-3.09,0.25,2.39,1.03,0.02,">1 nonsynonymous","K87L C158S K198T",3
"lib2","SARS-CoV-2","AGCCAAGTCAAGTTAG",2,6.77,6.9,-3.93,2,1.5,1.21,0.05,">1 nonsynonymous","S41K V103D",2
"lib2","SARS-CoV-2","AGCCAAGTGAATACCG",2,99.13,10.48,-0.36,0.05,2.85,1.04,0,">1 nonsynonymous","S69T S139K",2
"lib2","SARS-CoV-2","AGCCAATAAAGAAACT",3,59.72,8.69,-2.15,0.1,2.71,1.09,0,">1 nonsynonymous","E10S N118D P169Q",3
"lib2","SARS-CoV-2","AGCCAATACAAATCTA",3,34.94,10.6,-0.23,0.04,2.94,1.08,0,">1 nonsynonymous","V65F T201D",2
"lib2","SARS-CoV-2","AGCCAATAGAGACTAT",19,246.01,10.2,-0.63,0.03,2.93,1.05,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","AGCCAATCACCAGGTC",7,38.32,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S19L K56P A105D C158R G174L H189P",6
"lib2","SARS-CoV-2","AGCCAATTAGAGTACG",2,8.46,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V20W K128C I142D G174T",4
"lib2","SARS-CoV-2","AGCCAATTTAATATTA",1,31.95,10.17,-0.66,0.09,2.74,1.03,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","AGCCAATTTGTGTTTA",8,85.66,9.92,-0.91,0.06,2.03,1.05,0,">1 nonsynonymous","N1K K56T A67Y S184Y",4
"lib2","SARS-CoV-2","AGCCAATTTTCAAACT",2,17.92,10.9,0.06,0.09,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCACAAACATGTGA",4,15.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80R W106S R127L",3
"lib2","SARS-CoV-2","AGCCACAAACGAAATT",11,68.46,8,-2.84,0.14,1.63,1.05,0.01,">1 nonsynonymous","L5Y S113H E141F P169A",4
"lib2","SARS-CoV-2","AGCCACAAGGTCCATT",6,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F A105V",2
"lib2","SARS-CoV-2","AGCCACACAATCGTTG",4,103.21,8.59,-2.24,0.08,2.71,1.07,0,">1 nonsynonymous","V37F S69K Y119A",3
"lib2","SARS-CoV-2","AGCCACACGGCTCGTG",3,10.18,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2L S45L C158N",3
"lib2","SARS-CoV-2","AGCCACAGAGATTCAT",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H R16D S45D G51V C158T A192R",6
"lib2","SARS-CoV-2","AGCCACCATGTAAAAT",6,26.16,7.26,-3.58,0.48,1.61,1.24,0.05,">1 nonsynonymous","T15H V37Y A67D",3
"lib2","SARS-CoV-2","AGCCACCCTCGCCACC",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R V20G D68H D97Y V103M F167T",6
"lib2","SARS-CoV-2","AGCCACCGCCAACATT",4,38.46,9.56,-1.28,0.14,2.27,1.13,0.01,">1 nonsynonymous","S45P R78H V115T G152A K198T",5
"lib2","SARS-CoV-2","AGCCACCTACTCTCTA",8,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L N64V Y119R P169S",4
"lib2","SARS-CoV-2","AGCCACGGAAACATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* T201S",2
"lib2","SARS-CoV-2","AGCCACGGGAAATGCA",1,12.19,9.89,-0.95,0.16,2.52,1.39,0.01,">1 nonsynonymous","F12L S36L",2
"lib2","SARS-CoV-2","AGCCACGGTCCCTAAC",11,191.34,9.74,-1.1,0.03,2.83,1.06,0,">1 nonsynonymous","N118M N130L",2
"lib2","SARS-CoV-2","AGCCACTACTGTTCAT",4,77.29,10.63,-0.2,0.05,2.87,1.1,0,">1 nonsynonymous","A42I P149H",2
"lib2","SARS-CoV-2","AGCCACTATTGCATAG",1,5.61,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F47R G83I",2
"lib2","SARS-CoV-2","AGCCACTATTTGACAT",1,13.55,10.67,-0.16,0.05,2.85,1.17,0,"1 nonsynonymous","G174N",1
"lib2","SARS-CoV-2","AGCCACTGAAACTCCT",1,6.15,8.53,-2.31,0.31,1.5,1.2,0.04,">1 nonsynonymous","F44R N58T N109L G152N V173N",5
"lib2","SARS-CoV-2","AGCCACTGAACTTCGC",6,80.44,9.73,-1.11,0.1,2.21,1.09,0,">1 nonsynonymous","N40R G51L",2
"lib2","SARS-CoV-2","AGCCACTGAGCCTTCT",1,33.17,9.39,-1.44,0.07,2.93,1.09,0,">1 nonsynonymous","A33W G117V",2
"lib2","SARS-CoV-2","AGCCACTTACTCACCA",1,20.05,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","AGCCACTTGCCGGACA",1,7.14,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","D112W E141A",2
"lib2","SARS-CoV-2","AGCCAGAAAAAAATCT",3,49.37,10.66,-0.18,0.03,2.96,1.03,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","AGCCAGAAGACGAACT",4,90.59,10.76,-0.08,0.04,2.97,1.05,0,"1 nonsynonymous","D59G",1
"lib2","SARS-CoV-2","AGCCAGACGAAACACC",2,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V Y50M V77S D97I C102L R124L E141T",7
"lib2","SARS-CoV-2","AGCCAGCAAGTAAAAG",2,6.54,8.26,-2.58,0.18,1.79,1.03,0.02,">1 nonsynonymous","L5F A33G S139I G174E",4
"lib2","SARS-CoV-2","AGCCAGCACCCCCCTA",4,1.43,NA,NA,NA,NA,NA,NA,"stop","Y91* L162A Y165T",3
"lib2","SARS-CoV-2","AGCCAGCATACAGGAG",8,35.02,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L57V L95R E141D S200L",4
"lib2","SARS-CoV-2","AGCCAGCATTAGCCAA",3,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M A33N Y39W C102S P161N",5
"lib2","SARS-CoV-2","AGCCAGCGCAGAAATG",2,15.27,10.49,-0.35,0.05,2.9,1.08,0,"1 nonsynonymous","N107P",1
"lib2","SARS-CoV-2","AGCCAGCTACCATGCA",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S T63L",2
"lib2","SARS-CoV-2","AGCCAGCTGATGGCAT",5,1.5,NA,NA,NA,NA,NA,NA,"stop","F17P C61* F99Q",3
"lib2","SARS-CoV-2","AGCCAGCTTACAGACA",6,52.07,9.06,-1.77,0.09,2.86,1.05,0,">1 nonsynonymous","D90H F126Y",2
"lib2","SARS-CoV-2","AGCCAGGAAAGAAGCA",3,23.39,10.3,-0.54,0.05,2.97,1,0,">1 nonsynonymous","A14T P149T",2
"lib2","SARS-CoV-2","AGCCAGGATGACTATG",4,66.81,8.4,-2.44,0.1,2.63,1.07,0,">1 nonsynonymous","A105T K114I F156C",3
"lib2","SARS-CoV-2","AGCCAGGATTCACGGG",3,33.67,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","K56R F70N Q84S E186K",4
"lib2","SARS-CoV-2","AGCCAGGCATAGACCG",2,10.12,8.79,-2.04,0.15,2.09,1,0.02,">1 nonsynonymous","F8D G116K",2
"lib2","SARS-CoV-2","AGCCAGGTGGTAATTC",5,57.94,10.61,-0.23,0.07,2.95,1.04,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","AGCCAGTAACCATCCT",6,54.15,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y39V D59G L131R L188R",4
"lib2","SARS-CoV-2","AGCCAGTACTCAGTCT",7,49.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23K L57I",2
"lib2","SARS-CoV-2","AGCCAGTATTAGAAAA",21,145.67,6.04,-4.79,1.01,1.5,1.27,0.02,">1 nonsynonymous","N1S G83A C150Y P177M",4
"lib2","SARS-CoV-2","AGCCAGTGCCAATAGT",1,35.98,7.21,-3.63,0.3,1.75,1.14,0.02,">1 nonsynonymous","A14K C158S",2
"lib2","SARS-CoV-2","AGCCAGTTAGAACATT",5,10.14,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I2S Y91I R136P",3
"lib2","SARS-CoV-2","AGCCATAAACAATTAA",1,20.93,10.71,-0.12,0.09,2.9,1.09,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","AGCCATAACAAGCTCG",12,163.87,9.64,-1.2,0.08,2.53,1.02,0,">1 nonsynonymous","I2C T46C T140M F160D",4
"lib2","SARS-CoV-2","AGCCATAACCAAAAAG",7,0,NA,NA,NA,NA,NA,NA,"stop","L60* V180C",2
"lib2","SARS-CoV-2","AGCCATAAGCGAATTA",2,46.28,10.79,-0.05,0.06,2.85,1.13,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","AGCCATAATAACGTAC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I2A G9L G83D N110E Q163W S200*",6
"lib2","SARS-CoV-2","AGCCATAATGCGCGCG",1,19.99,8.59,-2.24,0.18,1.87,1.08,0.02,">1 nonsynonymous","Y50T Q168M",2
"lib2","SARS-CoV-2","AGCCATAATTACACGA",10,46.09,6.01,-4.83,1.59,1.5,1.35,0.03,">1 nonsynonymous","N4M D59S P82L",3
"lib2","SARS-CoV-2","AGCCATACAGTTTTAA",2,5.51,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","T85L S113T C158M K198Q",4
"lib2","SARS-CoV-2","AGCCATACATACCCAG",5,73.52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T55D S69M V77S D98E N120M K198T",6
"lib2","SARS-CoV-2","AGCCATACCACTGATT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","I28A T46I L131* K199S",4
"lib2","SARS-CoV-2","AGCCATACCATCCGCG",3,7.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6S D68V D97L",3
"lib2","SARS-CoV-2","AGCCATACCATGTCAC",7,121.67,8.24,-2.6,0.11,2.33,1.07,0,">1 nonsynonymous","K132R G146T N151S G155V",4
"lib2","SARS-CoV-2","AGCCATACTAGACTGC",2,18.17,10.6,-0.23,0.11,3,1.03,0.01,">1 nonsynonymous","R16D L125W",2
"lib2","SARS-CoV-2","AGCCATAGACCCCCAC",8,90.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F N107R R136T",3
"lib2","SARS-CoV-2","AGCCATAGGGCCCCCC",4,12.92,6,-4.84,2,1.5,1.17,0.08,">1 nonsynonymous","Q84R V103K Y123V E154T",4
"lib2","SARS-CoV-2","AGCCATCACATGTTCA",3,7.97,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","K26P D112T F134V Y143F",4
"lib2","SARS-CoV-2","AGCCATCACTGATCAG",5,67.96,10.07,-0.76,0.08,2.52,1.08,0,"1 nonsynonymous","F47R",1
"lib2","SARS-CoV-2","AGCCATCTTAGACAAT",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L P96N Y119T",3
"lib2","SARS-CoV-2","AGCCATGACGAGTGAC",1,14.56,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","E10T G86R Y91T D137Y",4
"lib2","SARS-CoV-2","AGCCATGAGAGAATAT",2,49.24,10.88,0.04,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCATGATACCTGTG",12,182.26,8.49,-2.35,0.11,2.94,1.07,0,">1 nonsynonymous","A42R L95V G117D Q168K",4
"lib2","SARS-CoV-2","AGCCATGCTTGGACAC",2,0.62,NA,NA,NA,NA,NA,NA,"stop","N1Y F99* N118T P133T",4
"lib2","SARS-CoV-2","AGCCATGGTAATAGGT",4,43.02,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48T N64M I88M F99V",4
"lib2","SARS-CoV-2","AGCCATGTAATTCTTA",3,35.86,6.06,-4.78,1.19,1.5,1.26,0.02,">1 nonsynonymous","I28S K87T A105C",3
"lib2","SARS-CoV-2","AGCCATGTGCTAAAGT",4,36.2,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P149H C158P Q168E",3
"lib2","SARS-CoV-2","AGCCATTAAATACTTA",8,45.95,6,-4.84,2,3,1.11,0,">1 nonsynonymous","W106L R127S Y143N",3
"lib2","SARS-CoV-2","AGCCATTACATGTGAA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","N64*",1
"lib2","SARS-CoV-2","AGCCATTATATCTCAC",1,0.6,NA,NA,NA,NA,NA,NA,"stop","A33E N107*",2
"lib2","SARS-CoV-2","AGCCATTGAAAAGAAC",3,101.23,10.66,-0.18,0.04,2.98,1.06,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","AGCCATTGCATGGATA",2,179.49,9.38,-1.45,0.06,2.72,1.05,0,">1 nonsynonymous","R16D Y91M D97S G174S",4
"lib2","SARS-CoV-2","AGCCATTTACCCGTCA",1,20.03,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A14L D68V E141D F160S",4
"lib2","SARS-CoV-2","AGCCCAAAAACCAGAT",11,55.46,9.85,-0.99,0.11,1.79,1.05,0,"1 nonsynonymous","L131A",1
"lib2","SARS-CoV-2","AGCCCAAAATGTTATT",3,0,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","AGCCCAAATAATTCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* I28S V153I",3
"lib2","SARS-CoV-2","AGCCCAAATACAAAAC",2,34.98,10.68,-0.16,0.06,2.95,1.07,0,">1 nonsynonymous","G9A Y39R Y66W",3
"lib2","SARS-CoV-2","AGCCCAACCTCTAGTG",1,24.79,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V71M A145C Q168L",3
"lib2","SARS-CoV-2","AGCCCAAGTGTCAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","D68* E154R G174M",3
"lib2","SARS-CoV-2","AGCCCAATAACGATAG",5,41.92,10.32,-0.52,0.1,2.67,1.06,0,">1 nonsynonymous","R16W K132P",2
"lib2","SARS-CoV-2","AGCCCAATCCATTTTA",10,40.97,6.74,-4.09,0.39,1.5,1.13,0.02,">1 nonsynonymous","I104E R136M Y175L L188W A190R",5
"lib2","SARS-CoV-2","AGCCCAATTACAATTG",6,1.57,NA,NA,NA,NA,NA,NA,"stop","L5G I104* K114G",3
"lib2","SARS-CoV-2","AGCCCACATGAGCGTA",4,24.53,9.47,-1.37,0.19,1.66,1.19,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","AGCCCACCCCAAGTTC",2,13.26,9.76,-1.07,0.13,2.21,1.02,0.01,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","AGCCCACCCGTCAGCG",2,99.96,10.84,0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCCACGACATAATT",7,7.27,NA,NA,NA,NA,NA,NA,"stop","G86* D90Y W106T",3
"lib2","SARS-CoV-2","AGCCCACGATCACTAG",10,94.8,10.73,-0.1,0.06,2.91,1.11,0,">1 nonsynonymous","A22K S43T T85S",3
"lib2","SARS-CoV-2","AGCCCACGATCCATTT",8,102.97,10.8,-0.03,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCCACTACCCACGA",1,17.38,6,-4.84,2,1.5,1.26,0.04,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","AGCCCAGAATCATCAG",6,7.61,6,-4.84,2,3,1.17,0.05,">1 nonsynonymous","N4T W23G G51E",3
"lib2","SARS-CoV-2","AGCCCAGACATATGAA",5,49.43,10.45,-0.39,0.06,2.95,1.05,0,">1 nonsynonymous","G9N F44S",2
"lib2","SARS-CoV-2","AGCCCAGACGAGGACA",1,12.89,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98F Y143T",2
"lib2","SARS-CoV-2","AGCCCAGCTCCATTAA",12,129.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20L I28L S36I I80K",4
"lib2","SARS-CoV-2","AGCCCAGGCTAGCTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L G172V",2
"lib2","SARS-CoV-2","AGCCCAGTTGGAGATC",3,34.49,10.7,-0.13,0.03,2.97,1.05,0,">1 nonsynonymous","V37M C61P",2
"lib2","SARS-CoV-2","AGCCCATAAATAAGTA",1,5.23,11.03,0.2,0.13,2.72,1.3,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCCATAACGCTAAC",1,24.38,10.82,-0.01,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCCATACGGCCCCG",9,20.29,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","R16Y A22R P96I Y178I F185P",5
"lib2","SARS-CoV-2","AGCCCATCGCTGCACC",3,12.39,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","F70P N120R L183Y",3
"lib2","SARS-CoV-2","AGCCCATGCACAGAAA",3,59.34,10.28,-0.56,0.06,2.76,1.1,0,">1 nonsynonymous","E10M D34N",2
"lib2","SARS-CoV-2","AGCCCATTACACACAA",11,52.99,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","Y121A T148G L162I E186A",4
"lib2","SARS-CoV-2","AGCCCATTACTCATGT",4,33.72,10.74,-0.1,0.08,2.85,1.11,0,"1 nonsynonymous","E76D",1
"lib2","SARS-CoV-2","AGCCCCAAAAATGGCA",6,76.08,10.44,-0.39,0.06,2.9,1.06,0,">1 nonsynonymous","N4A E10R T63S",3
"lib2","SARS-CoV-2","AGCCCCAAACGCAATC",10,21.62,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib2","SARS-CoV-2","AGCCCCAACACAAACT",5,60.01,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G86L G166L",2
"lib2","SARS-CoV-2","AGCCCCAATATGGAAA",7,59.95,7.53,-3.3,0.25,1.5,1.02,0.02,">1 nonsynonymous","P7L N24R S69L A81V",4
"lib2","SARS-CoV-2","AGCCCCACACACTAAT",8,71.04,7.28,-3.56,0.39,1.5,1.05,0.04,">1 nonsynonymous","L57D D97V G117N L122V",4
"lib2","SARS-CoV-2","AGCCCCACGGCGCGCA",3,144.63,10.48,-0.35,0.03,2.98,1.03,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","AGCCCCAGCGCTATAC",5,61.5,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","K56L P177T",2
"lib2","SARS-CoV-2","AGCCCCAGTGAACAGA",6,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107W V173P",2
"lib2","SARS-CoV-2","AGCCCCATAGTTGCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","H189T",1
"lib2","SARS-CoV-2","AGCCCCCAAGGCGTGA",1,7.06,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","D34I L95N L122R T148E",4
"lib2","SARS-CoV-2","AGCCCCCATGGTCATA",3,63.92,10.05,-0.79,0.1,2.71,1.01,0,">1 nonsynonymous","S19A A33N K114A L122Q T140E",5
"lib2","SARS-CoV-2","AGCCCCCGGAACGACA",8,34.57,6,-4.84,2,1.5,1.14,0.02,"1 nonsynonymous","I80W",1
"lib2","SARS-CoV-2","AGCCCCCTTAAACGTC",4,118.2,10.57,-0.26,0.04,2.89,1.1,0,">1 nonsynonymous","K87T S147F",2
"lib2","SARS-CoV-2","AGCCCCGACCGATACG",20,4.52,NA,NA,NA,NA,NA,NA,"stop","Y91K Y119*",2
"lib2","SARS-CoV-2","AGCCCCGACTCTAAAA",6,91.98,10.85,0.01,0.07,2.83,1.2,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCCCCGCAGATAAGC",3,68.03,6,-4.84,1.37,1.5,1.16,0.01,">1 nonsynonymous","D112R V173E",2
"lib2","SARS-CoV-2","AGCCCCGCAGATACAG",14,1043.62,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S41H L57S G83F L95V Y119Q Y175R",6
"lib2","SARS-CoV-2","AGCCCCTAATGAAATC",4,51.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20S R25G G116S Y123L K199M",5
"lib2","SARS-CoV-2","AGCCCCTATCGGAGGT",4,9.34,6.04,-4.8,1.66,1.5,1.16,0.04,">1 nonsynonymous","F47C D98C E135T",3
"lib2","SARS-CoV-2","AGCCCCTGCCACCTGG",13,109.53,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","R16N F167S L183C",3
"lib2","SARS-CoV-2","AGCCCCTTACCTATGT",16,248.26,10.86,0.03,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCCGAAGCGAATTC",5,64.97,8.75,-2.08,0.07,2.28,1.05,0,">1 nonsynonymous","L38I F47K K87E",3
"lib2","SARS-CoV-2","AGCCCGAAGCGAGTTG",5,119.8,10.31,-0.53,0.06,2.73,1.08,0,"1 nonsynonymous","N24L",1
"lib2","SARS-CoV-2","AGCCCGAAGGATAGAA",3,7.47,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","I2P N58V A89L",3
"lib2","SARS-CoV-2","AGCCCGCAACTACTAC",5,33.66,9.12,-1.72,0.06,2.96,1.09,0,">1 nonsynonymous","I2T G166R S200Y",3
"lib2","SARS-CoV-2","AGCCCGCCAATTCACA",14,112.85,8.59,-2.25,0.13,1.63,1.14,0.01,">1 nonsynonymous","A22S I88A",2
"lib2","SARS-CoV-2","AGCCCGCCGCCTCTAG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","S29Y T63* K87N G146L Q168* L188*",6
"lib2","SARS-CoV-2","AGCCCGGAGTATAGGG",8,204.7,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","R16K K48Y W106S R127G",4
"lib2","SARS-CoV-2","AGCCCGGATCTGCTCA",2,83.87,10.72,-0.12,0.04,2.99,1.04,0,"1 nonsynonymous","F47W",1
"lib2","SARS-CoV-2","AGCCCGGCCAAAATCT",2,38.5,8.79,-2.05,0.07,2.91,1.07,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","AGCCCGTAGAAATGGT",3,80.72,6.13,-4.7,0.61,1.5,1.14,0.01,">1 nonsynonymous","G9R P54S Q176D",3
"lib2","SARS-CoV-2","AGCCCGTTTAAAAATG",1,22.4,10.76,-0.08,0.1,2.84,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCCCGTTTTTACATA",3,5.4,6.68,-4.16,0.45,1.5,1,0.01,">1 nonsynonymous","T15R S36W A89N D97T",4
"lib2","SARS-CoV-2","AGCCCTAGCAAACCTG",5,73.02,10.57,-0.27,0.04,2.89,1.04,0,">1 nonsynonymous","R127K T201K",2
"lib2","SARS-CoV-2","AGCCCTATTAGCCTCT",12,173.01,10.64,-0.2,0.03,2.94,1.02,0,">1 nonsynonymous","D98K N120S",2
"lib2","SARS-CoV-2","AGCCCTCTTTACATCT",6,106.67,10.84,0,0.04,2.94,1.07,0,"1 nonsynonymous","F160R",1
"lib2","SARS-CoV-2","AGCCCTGAGTAAATAG",6,33.65,8.37,-2.47,0.32,1.5,1,0.05,"1 nonsynonymous","Y93M",1
"lib2","SARS-CoV-2","AGCCCTGCAGTGTCCA",12,76.15,9.44,-1.39,0.07,2.05,1.04,0,"1 nonsynonymous","D137V",1
"lib2","SARS-CoV-2","AGCCCTGTGGTAATAC",4,34.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P96K A105D F134G",3
"lib2","SARS-CoV-2","AGCCCTTCAGAATCCA",1,8.15,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7L Y35L N58H W106K R127I G174V",6
"lib2","SARS-CoV-2","AGCCCTTCTCCGGACC",3,23.47,10.2,-0.64,0.07,2.86,1,0,">1 nonsynonymous","S36R F47C",2
"lib2","SARS-CoV-2","AGCCCTTGAAAATGCA",5,8.13,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I28M L38Q T63L P96H L131S G152I",6
"lib2","SARS-CoV-2","AGCCCTTTCAACAGTT",2,63.62,10.38,-0.45,0.05,2.96,1.06,0,">1 nonsynonymous","R27A S36W S139T",3
"lib2","SARS-CoV-2","AGCCGAAAAACAAAGC",13,92.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23Q A81K P82T N130K V173E",5
"lib2","SARS-CoV-2","AGCCGAAAAGTAGAGA",3,1.59,NA,NA,NA,NA,NA,NA,"stop","G74I N120L N130P N171* T201L",5
"lib2","SARS-CoV-2","AGCCGAAAAGTTTTAG",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Q G51E D59N D68V N107S N120P G152S",7
"lib2","SARS-CoV-2","AGCCGAAACGCATAGT",6,146.27,10.02,-0.81,0.07,2.4,1.03,0,">1 nonsynonymous","T46D F62G",2
"lib2","SARS-CoV-2","AGCCGAACACACAACC",15,125.82,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","S69W R78Y K94S G101N",4
"lib2","SARS-CoV-2","AGCCGAACACTCACTG",13,50.17,9.54,-1.3,0.16,1.83,1.11,0.01,">1 nonsynonymous","F47G G83K",2
"lib2","SARS-CoV-2","AGCCGAACTAGGCCAT",3,17.19,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L95W L162K",2
"lib2","SARS-CoV-2","AGCCGAACTTTATACT",7,45.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F G86D",2
"lib2","SARS-CoV-2","AGCCGAAGAAATTTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* E135H Y143L Y178F",4
"lib2","SARS-CoV-2","AGCCGAAGCGGGACCT",2,64.43,9.64,-1.19,0.08,2.54,1.09,0,">1 nonsynonymous","Y66E K87T V103I",3
"lib2","SARS-CoV-2","AGCCGAATTACGAAAC",10,157.15,10.88,0.05,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCGAATTACTGAAC",4,65.54,10.83,-0.01,0.04,2.9,1.12,0,"1 nonsynonymous","S200R",1
"lib2","SARS-CoV-2","AGCCGACAAACTAAAA",4,87.6,10.82,-0.02,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCGACAATAACAAT",7,153.96,10.87,0.03,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCGACACTAGGTTC",3,90.06,9.57,-1.26,0.03,2.92,1.08,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","AGCCGACCTTGTCGAT",4,129.91,10.86,0.03,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCGACGCTATTACA",5,86.08,6.14,-4.7,0.41,1.5,1.12,0.01,">1 nonsynonymous","L5N F44P G86R S139W P197T",5
"lib2","SARS-CoV-2","AGCCGAGAAAACCCAT",2,42.35,10.14,-0.7,0.09,2.86,1.02,0,"1 nonsynonymous","G51M",1
"lib2","SARS-CoV-2","AGCCGAGATATAATAA",2,0.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12I",1
"lib2","SARS-CoV-2","AGCCGATAACTTAACA",4,84.35,9.67,-1.16,0.09,2.08,1.06,0,">1 nonsynonymous","F44L L60N N120Y",3
"lib2","SARS-CoV-2","AGCCGATATGAAAGTA",6,28.38,6.24,-4.6,0.36,3,1.19,0.01,">1 nonsynonymous","Y35N A81D D90R P96V C102V C150K N157M",7
"lib2","SARS-CoV-2","AGCCGATCACAAAAAA",1,38.86,10.61,-0.23,0.05,2.96,1.06,0,">1 nonsynonymous","F12L A42K",2
"lib2","SARS-CoV-2","AGCCGATCATATTATG",9,65.83,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F8K P133T A190V T201R",4
"lib2","SARS-CoV-2","AGCCGATGAAAGGAAA",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L Y50F N64T P96I C102V T201I",6
"lib2","SARS-CoV-2","AGCCGATTATACGGCA",20,75.34,6.19,-4.64,0.69,1.5,1.26,0.01,">1 nonsynonymous","N4Q A42D A89D L122R K128L P149L",6
"lib2","SARS-CoV-2","AGCCGATTCAAATAAA",9,15.39,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A42I T63P A105K S113G",4
"lib2","SARS-CoV-2","AGCCGATTGGACAACC",1,0.65,NA,NA,NA,NA,NA,NA,"stop","N4Y A81L Y119*",3
"lib2","SARS-CoV-2","AGCCGCAAAAAAGACT",4,0.8,NA,NA,NA,NA,NA,NA,"stop","I2R D34* F47L E154R Y165P",5
"lib2","SARS-CoV-2","AGCCGCAAAATCCTAG",1,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K D68Q N157C",3
"lib2","SARS-CoV-2","AGCCGCATGAAGAAAA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","S113* Y175E",2
"lib2","SARS-CoV-2","AGCCGCCACAGAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V32P N110Y N151*",3
"lib2","SARS-CoV-2","AGCCGCGACAGTGCCC",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104E K128S",2
"lib2","SARS-CoV-2","AGCCGCGCACCATGAA",9,61.46,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Q84P A105P",2
"lib2","SARS-CoV-2","AGCCGCGCTGGAGGCA",11,301.61,7.34,-3.5,0.2,1.5,1.09,0.01,">1 nonsynonymous","S69M A145N T201K",3
"lib2","SARS-CoV-2","AGCCGCTAAGACTGAA",12,195.39,10.48,-0.36,0.04,2.88,1.06,0,">1 nonsynonymous","T3A P54Q T63L",3
"lib2","SARS-CoV-2","AGCCGCTCTCCGACAT",7,51.4,6,-4.84,0.53,1.5,1.13,0.01,">1 nonsynonymous","E10T T15G L38Q R73V N92D",5
"lib2","SARS-CoV-2","AGCCGGAAACGTTACT",1,51,10.82,-0.02,0.06,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCGGAACTACGTCT",1,39.79,7.75,-3.09,0.13,2.51,1.09,0.01,"1 nonsynonymous","Y143G",1
"lib2","SARS-CoV-2","AGCCGGACTCTTAGGA",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G N58T T100H W106T P169L",5
"lib2","SARS-CoV-2","AGCCGGCCCCCAATTT",6,0,NA,NA,NA,NA,NA,NA,"stop","F44Y F47* A89Q V153K",4
"lib2","SARS-CoV-2","AGCCGGGTATTCCCGC",2,44.36,9.67,-1.17,0.09,2.05,1.01,0,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","AGCCGGGTCTAAAGCC",2,68.41,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Y39E S45P C49V T140L V153Q",5
"lib2","SARS-CoV-2","AGCCGGTCAAACCTAA",2,2.52,NA,NA,NA,NA,NA,NA,"stop","L60* V71L Y93N Q144I Y175E Q176K V181C",7
"lib2","SARS-CoV-2","AGCCGTACATTCTTTA",2,46.32,9.24,-1.59,0.07,2.82,1.05,0,">1 nonsynonymous","T15I L122T T170F",3
"lib2","SARS-CoV-2","AGCCGTATAAACAAAT",3,60.05,9.71,-1.12,0.12,2.76,1.08,0.01,">1 nonsynonymous","C6G L60T K132S",3
"lib2","SARS-CoV-2","AGCCGTATCCAGAAAC",4,0.4,NA,NA,NA,NA,NA,NA,"stop","V37* D75Y D97H G146C",4
"lib2","SARS-CoV-2","AGCCGTCACTGAACAA",8,60.11,8.45,-2.38,0.16,2.74,1.17,0.01,"1 nonsynonymous","N171D",1
"lib2","SARS-CoV-2","AGCCGTCTAAATGCCT",3,92.3,10.58,-0.26,0.05,2.83,1.07,0,">1 nonsynonymous","N1F P133A",2
"lib2","SARS-CoV-2","AGCCGTGGATTCCAAA",5,75.97,8.23,-2.61,0.18,1.87,1.05,0.01,">1 nonsynonymous","Y35D N58P Q168L",3
"lib2","SARS-CoV-2","AGCCGTTATACCAGCA",2,19.14,9.84,-0.99,0.18,2.09,1.02,0.02,">1 nonsynonymous","G9S T15C N24S S41L C61N P149W",6
"lib2","SARS-CoV-2","AGCCGTTGAGCAACTC",3,41.95,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","F8S Y91H K132A S164G",4
"lib2","SARS-CoV-2","AGCCGTTTCAAGTATT",11,46.96,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F70L P82C G86R N120S F167G A190C",6
"lib2","SARS-CoV-2","AGCCGTTTTCGTTACC",6,81.17,10.37,-0.46,0.04,2.94,1.06,0,">1 nonsynonymous","G174L T201Q",2
"lib2","SARS-CoV-2","AGCCTAAAAAGAAATT",5,32.76,9.93,-0.9,0.08,2.88,1.08,0,">1 nonsynonymous","T3C G9S L60V N151Q F156H",5
"lib2","SARS-CoV-2","AGCCTAAAACATAGCT",8,0.57,NA,NA,NA,NA,NA,NA,"stop","V32Q S45* T55K",3
"lib2","SARS-CoV-2","AGCCTAAAATAATCCA",5,42.31,6,-4.84,1.95,1.5,1.17,0.02,">1 nonsynonymous","V52L Y123C G146F",3
"lib2","SARS-CoV-2","AGCCTAAACCAAAATA",1,66.51,10.52,-0.31,0.08,2.95,1,0,"1 nonsynonymous","Y178V",1
"lib2","SARS-CoV-2","AGCCTAAACGCTGCCT",1,8.81,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","C49N Y119C C150K",3
"lib2","SARS-CoV-2","AGCCTAAATACACATA",3,34.86,7.2,-3.64,0.54,1.5,1.15,0.07,">1 nonsynonymous","L57W R127V A145E",3
"lib2","SARS-CoV-2","AGCCTAACTAAGATGA",4,60.25,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A18T C31M N64V A89C Y121S F167D",6
"lib2","SARS-CoV-2","AGCCTAACTAATGGAG",9,266.62,10.85,0.01,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCTAAGAATATTAT",2,7.17,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S43T C102S",2
"lib2","SARS-CoV-2","AGCCTAAGGACGAATG",7,124.29,10.17,-0.67,0.03,2.9,1.07,0,"1 nonsynonymous","C6Y",1
"lib2","SARS-CoV-2","AGCCTAAGGCCTGGCT",6,77.6,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F62D S69R L125E N151Y P161C N171P",6
"lib2","SARS-CoV-2","AGCCTAAGTTAACTGT",11,38.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68L T85S N110P",3
"lib2","SARS-CoV-2","AGCCTAATACAGGTTT",12,217.32,9.7,-1.14,0.02,2.95,1.05,0,"1 nonsynonymous","N157D",1
"lib2","SARS-CoV-2","AGCCTAATCTATTTAG",15,193.84,10.43,-0.41,0.03,2.93,1.06,0,">1 nonsynonymous","I2L G83D",2
"lib2","SARS-CoV-2","AGCCTACAAAGCATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","F17T C102*",2
"lib2","SARS-CoV-2","AGCCTACACACTTATT",3,53.47,10.25,-0.59,0.08,2.71,1.06,0,">1 nonsynonymous","T15F S43T",2
"lib2","SARS-CoV-2","AGCCTACCAACTTATA",4,59.5,9.49,-1.35,0.06,2.72,1.06,0,">1 nonsynonymous","N64S E154F",2
"lib2","SARS-CoV-2","AGCCTAGAAGAAAAAG",5,53.56,9.52,-1.32,0.06,2.85,1.1,0,">1 nonsynonymous","K87V N107T",2
"lib2","SARS-CoV-2","AGCCTAGGAATCAAGT",7,102.23,10.8,-0.03,0.04,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCTAGGACTAAAGT",1,38.95,10.81,-0.02,0.05,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCCTATAACACTAAG",7,71.45,9.67,-1.16,0.04,2.91,1.04,0,">1 nonsynonymous","T3L S41G K87S T148N S200R",5
"lib2","SARS-CoV-2","AGCCTATAATCAGTTA",4,15.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88M G101C N107T",3
"lib2","SARS-CoV-2","AGCCTATACGAATAAA",6,112.94,9.06,-1.78,0.09,1.59,1.1,0,">1 nonsynonymous","S139R N151A Y178I H189R",4
"lib2","SARS-CoV-2","AGCCTATGAGGAACGA",6,114.34,8.53,-2.31,0.06,2.04,1.07,0,">1 nonsynonymous","L5I L60M G83I Q163E C195P",5
"lib2","SARS-CoV-2","AGCCTATGCAGCATTC",9,38.7,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F12L D68E K87Y T100K P169I K199Q",6
"lib2","SARS-CoV-2","AGCCTATTAATTACAG",4,0.29,NA,NA,NA,NA,NA,NA,"stop","A42Q T148A F156*",3
"lib2","SARS-CoV-2","AGCCTCAAAGATATTC",3,22.45,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14Y G101N P133L T140N T148V",5
"lib2","SARS-CoV-2","AGCCTCAAGACAATAA",1,32.81,10.69,-0.14,0.05,2.86,1.14,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","AGCCTCAGAACTTGCG",4,25.07,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","E135S P161I",2
"lib2","SARS-CoV-2","AGCCTCAGTATTCCAA",14,94.76,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T63N L95R N120C",3
"lib2","SARS-CoV-2","AGCCTCATCCGTCCGT",6,75,10.75,-0.08,0.04,2.9,1.11,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","AGCCTCCGAATCTGAT",1,0.42,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","AGCCTCCTTGAACCCG",6,75.11,10.76,-0.07,0.04,3,1.01,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","AGCCTCTACAGAAATC",2,13.48,10.2,-0.63,0.1,2.91,1.01,0,">1 nonsynonymous","C6I N24K K56N",3
"lib2","SARS-CoV-2","AGCCTCTATACTTACC",3,19.58,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","T85Y G101N",2
"lib2","SARS-CoV-2","AGCCTCTGCTGGGATA",2,34.32,8.82,-2.02,0.28,1.5,1.1,0.03,">1 nonsynonymous","T63E G74C D90F",3
"lib2","SARS-CoV-2","AGCCTCTGTAAGTTGG",2,5.28,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L5A C49K Y143S P169L V194A",5
"lib2","SARS-CoV-2","AGCCTCTGTTGATTTC",5,33.17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4P D68E E135L",3
"lib2","SARS-CoV-2","AGCCTGAAGGGAGTCT",2,37.13,10.75,-0.09,0.09,2.86,1.15,0,"1 nonsynonymous","F160G",1
"lib2","SARS-CoV-2","AGCCTGAGATATCCAT",6,76.99,9.9,-0.93,0.06,2.51,1.04,0,">1 nonsynonymous","L60S V65W",2
"lib2","SARS-CoV-2","AGCCTGCGTAAAAAAA",5,55.78,6.46,-4.38,0.34,1.5,1.07,0.01,">1 nonsynonymous","Y35F F167C",2
"lib2","SARS-CoV-2","AGCCTGCTGACCCCGC",7,38.38,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K48N Y91H D98N W106G K114F L122K G172L",7
"lib2","SARS-CoV-2","AGCCTGGTACGACAGG",3,64.6,10.87,0.03,0.05,2.9,1.11,0,"1 nonsynonymous","D59Q",1
"lib2","SARS-CoV-2","AGCCTGTAGCTGTCTC",2,25.89,8.82,-2.02,0.08,2.84,1.12,0,">1 nonsynonymous","L60I V77L G117D",3
"lib2","SARS-CoV-2","AGCCTGTCCTTGAAAC",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S T15V G86H F99P N171R",5
"lib2","SARS-CoV-2","AGCCTGTGGCTGATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F C61W P133S",3
"lib2","SARS-CoV-2","AGCCTTAACCCCAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V32F G116* N157Y",3
"lib2","SARS-CoV-2","AGCCTTAATTTAAGAC",5,27.99,6.09,-4.75,1.16,1.5,1.1,0.06,">1 nonsynonymous","Q84R Y121V L162R",3
"lib2","SARS-CoV-2","AGCCTTACCACTACAG",1,34.25,10.84,0.01,0.08,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCTTATAGTAATGA",12,97.99,8.09,-2.75,0.18,1.61,1.11,0.01,">1 nonsynonymous","D98R Y119S F185V",3
"lib2","SARS-CoV-2","AGCCTTATGATCCCGC",12,81.82,9.81,-1.03,0.08,2.42,1.05,0,">1 nonsynonymous","N1V W106F N171S",3
"lib2","SARS-CoV-2","AGCCTTATTTGTTGTA",5,142.59,9.82,-1.02,0.05,2.9,1.08,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","AGCCTTCAGACATTGA",6,81.2,10.77,-0.06,0.05,2.97,1.05,0,">1 nonsynonymous","N4V L122N K198G",3
"lib2","SARS-CoV-2","AGCCTTCCAAGATGGG",5,61.54,9.71,-1.12,0.07,2.78,1,0,">1 nonsynonymous","A81S S164L S200E",3
"lib2","SARS-CoV-2","AGCCTTCGATGCTTTA",1,16.44,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D97Y D137T F156V",3
"lib2","SARS-CoV-2","AGCCTTCGCAACTAAT",4,40.44,10.39,-0.44,0.04,2.95,1.06,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","AGCCTTCTAAACTAGC",4,0.85,NA,NA,NA,NA,NA,NA,"stop","S41H Y119K Q168*",3
"lib2","SARS-CoV-2","AGCCTTCTTATAACCT",1,46.99,10.87,0.03,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCTTGCATAATTAC",4,64.38,10.1,-0.74,0.05,2.83,1.01,0,">1 nonsynonymous","G83I F160C K198N",3
"lib2","SARS-CoV-2","AGCCTTGTATTCACGG",1,5.06,7.22,-3.62,0.45,1.5,1,0.03,">1 nonsynonymous","G86F L122S Q168S S200A",4
"lib2","SARS-CoV-2","AGCCTTGTGCATATAG",8,0.05,NA,NA,NA,NA,NA,NA,"stop","A33* N64G K94V T201N",4
"lib2","SARS-CoV-2","AGCCTTTACCATTCAA",2,41.65,10.91,0.08,0.11,2.86,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCCTTTAGTCGACAG",4,20.94,9.7,-1.14,0.12,2.54,1.06,0.01,">1 nonsynonymous","C6N N58P N64Q",3
"lib2","SARS-CoV-2","AGCCTTTCAAAGCTCG",3,58.49,10.68,-0.15,0.06,2.89,1.05,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","AGCCTTTGATAAAATC",1,57.21,10,-0.84,0.11,2.3,1.04,0,">1 nonsynonymous","D90C E135H S200L",3
"lib2","SARS-CoV-2","AGCGAAAACATAAATA",4,52.02,9.73,-1.1,0.07,2.08,1.06,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","AGCGAAAAGATATGGC",11,162.22,10.36,-0.48,0.04,2.85,1.03,0,">1 nonsynonymous","Y91L N130G",2
"lib2","SARS-CoV-2","AGCGAAAATCAAAAGC",2,8.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D112V T140G E154P",3
"lib2","SARS-CoV-2","AGCGAAACACGGACGC",6,200.61,10.76,-0.07,0.02,2.91,1.09,0,"1 nonsynonymous","E141Q",1
"lib2","SARS-CoV-2","AGCGAAACGACCCACA",3,21.58,11,0.16,0.09,2.78,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAAAGGACCTATA",6,80.05,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y21P S29L S36C G101Y",4
"lib2","SARS-CoV-2","AGCGAAAGGCTGTTCC",1,35.64,9.78,-1.06,0.09,2.37,1.11,0,">1 nonsynonymous","N64Q L95M K128M P149K",4
"lib2","SARS-CoV-2","AGCGAAAGTTCCGGCG",7,98.18,8.61,-2.23,0.07,2.98,1.03,0,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","AGCGAAAGTTCTGGCG",7,87.36,10.8,-0.04,0.03,2.9,1.1,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","AGCGAAATTCCTAAAA",8,41.78,9.45,-1.39,0.13,1.9,1.16,0.01,">1 nonsynonymous","T3C S45I",2
"lib2","SARS-CoV-2","AGCGAACAACGACACA",6,29.48,6,-4.84,1.65,1.5,1.14,0.01,">1 nonsynonymous","P96M A105E",2
"lib2","SARS-CoV-2","AGCGAACAAGATAAAT",11,57.48,8.16,-2.68,0.19,1.5,1.08,0.01,">1 nonsynonymous","Y123L K128Y I138S Q144H",4
"lib2","SARS-CoV-2","AGCGAACACAAATAGC",2,28.4,6.73,-4.11,0.5,1.5,1.16,0.05,">1 nonsynonymous","L5C D112F",2
"lib2","SARS-CoV-2","AGCGAACAGACTGAAA",4,70.08,10.07,-0.76,0.06,2.75,1,0,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","AGCGAACATAAAAAAT",2,42.92,10.85,0.02,0.06,2.86,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAACATATAAATA",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F P54Q N64I N109I L122G S139D",6
"lib2","SARS-CoV-2","AGCGAACCTTCTTCAA",3,36.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28T S45Y W106M",3
"lib2","SARS-CoV-2","AGCGAACCTTGATGCA",6,62.31,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6D S45R L60N W106L Y175E",5
"lib2","SARS-CoV-2","AGCGAACTTTTGGGAG",2,3.91,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAAGAGGCTAATT",2,41.97,6.06,-4.78,1.05,1.5,1.2,0.03,">1 nonsynonymous","L125T E141R C158R",3
"lib2","SARS-CoV-2","AGCGAAGATGCAATAT",9,71.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y93P N110V E141S L188K",4
"lib2","SARS-CoV-2","AGCGAAGCGTTGCTAA",4,66.85,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36W K48G P96T P149R",4
"lib2","SARS-CoV-2","AGCGAAGTACCAACTA",10,147.75,6.67,-4.17,0.26,1.5,1.13,0.01,">1 nonsynonymous","E10K D112S",2
"lib2","SARS-CoV-2","AGCGAATAAAGTACAT",5,41.79,10.29,-0.54,0.04,2.8,1.07,0,"1 nonsynonymous","E135K",1
"lib2","SARS-CoV-2","AGCGAATAATAATTGA",5,23.67,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G51S L60V L183K",3
"lib2","SARS-CoV-2","AGCGAATCTGAACGCG",10,215.77,10.58,-0.26,0.04,2.87,1.06,0,">1 nonsynonymous","A14K R27N",2
"lib2","SARS-CoV-2","AGCGAATTACTCTCTG",7,21.73,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A42E T55A T140K C150K E186I",5
"lib2","SARS-CoV-2","AGCGAATTATGACAAC",2,0.33,NA,NA,NA,NA,NA,NA,"stop","C6* V11D S29R K87C D97S C102F",6
"lib2","SARS-CoV-2","AGCGAATTCTGTGGCG",10,280.76,10.75,-0.08,0.03,2.95,1.06,0,"1 nonsynonymous","C195F",1
"lib2","SARS-CoV-2","AGCGACAACTATTATT",2,5.39,7.04,-3.79,2,1.5,1.13,0.03,">1 nonsynonymous","F99G T201N",2
"lib2","SARS-CoV-2","AGCGACAGACGACGAA",4,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144Y",1
"lib2","SARS-CoV-2","AGCGACATGGTCATCA",4,28.6,6,-4.84,1.49,1.5,1.17,0.02,">1 nonsynonymous","S45A D112F R136E",3
"lib2","SARS-CoV-2","AGCGACCAACCACAAC",1,48.15,8.78,-2.05,0.14,1.69,1.11,0.01,">1 nonsynonymous","V65F D98E Y121V",3
"lib2","SARS-CoV-2","AGCGACCAACGTTCAA",8,0.93,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","AGCGACCATACTCTGC",7,55.39,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55P K114L Y165D",3
"lib2","SARS-CoV-2","AGCGACCGACAGCCAA",7,1.07,NA,NA,NA,NA,NA,NA,"stop","E10H N64Q K94* S113E",4
"lib2","SARS-CoV-2","AGCGACCGACAGGAAC",4,50.8,10.81,-0.02,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGACCGCTGAAAGA",4,15.95,9.08,-1.76,0.26,1.5,1.07,0.05,">1 nonsynonymous","T15A T63A T100G",3
"lib2","SARS-CoV-2","AGCGACTACACGTACA",6,170.47,10.75,-0.09,0.04,2.97,1.06,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","AGCGACTAGCCTCCAA",3,22.96,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","G83V Y121C V181N",3
"lib2","SARS-CoV-2","AGCGACTATGCATAAG",7,41.43,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","P96S C102L K132Q G196S",4
"lib2","SARS-CoV-2","AGCGACTCACACCACT",2,36.48,10.66,-0.18,0.08,2.87,1.13,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","AGCGACTCCTAGTGCA",5,34.31,6,-4.84,1.04,1.5,1.11,0,">1 nonsynonymous","T3L V37H L57T F99H Y175L",5
"lib2","SARS-CoV-2","AGCGACTTACAACTCC",10,110.8,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6F Y39D L95G G117S E141P G152P",6
"lib2","SARS-CoV-2","AGCGACTTGTTCACCA",3,21.74,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","L5T C61V A89R Y119L P169F",5
"lib2","SARS-CoV-2","AGCGAGAAAAGAGTAT",4,43.46,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","C61P G74P T201N",3
"lib2","SARS-CoV-2","AGCGAGAACATACACA",2,33.64,10.88,0.04,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAGAACCCTAGAG",3,2.26,NA,NA,NA,NA,NA,NA,"stop","N40W G51I G116* Q144P C195S",5
"lib2","SARS-CoV-2","AGCGAGACAATATACT",14,144.73,10.82,-0.02,0.04,2.81,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAGAGTTAAGCAA",10,34.2,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","C61Q V65R R179L",3
"lib2","SARS-CoV-2","AGCGAGATCAAACCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S V52H G83P V103T T148L",5
"lib2","SARS-CoV-2","AGCGAGATGAATGTTT",2,7.22,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49V P54H Q84T N130W D137M",5
"lib2","SARS-CoV-2","AGCGAGATTCATGGTT",2,22.96,10.24,-0.6,0.07,2.88,1.08,0,">1 nonsynonymous","D59V S184Y",2
"lib2","SARS-CoV-2","AGCGAGATTCATGTAA",1,21.91,10.82,-0.02,0.05,3,1,0,">1 nonsynonymous","R27V G152N",2
"lib2","SARS-CoV-2","AGCGAGCCGGATTGCG",1,0.18,NA,NA,NA,NA,NA,NA,"stop","R27* L60H G172T",3
"lib2","SARS-CoV-2","AGCGAGCCGGTTAAAA",1,0.35,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","AGCGAGCTGATAAACT",12,13.92,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D97I V103D S129M",3
"lib2","SARS-CoV-2","AGCGAGCTTACACCCA",3,6.78,10.71,-0.12,0.1,2.8,1.18,0.01,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","AGCGAGGATGCAATAT",10,60.41,6,-4.84,2,2.86,1.34,0.01,">1 nonsynonymous","F8K N107T A190W",3
"lib2","SARS-CoV-2","AGCGAGGGCACTACTT",10,113.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5F N157F Q176I",3
"lib2","SARS-CoV-2","AGCGAGGTAACACGAT",2,45.09,10.4,-0.43,0.04,2.89,1.07,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","AGCGAGTAAAGCAGTT",14,1330.11,9.46,-1.37,0.04,2.86,1.09,0,">1 nonsynonymous","K132S F156C",2
"lib2","SARS-CoV-2","AGCGAGTATAACCACC",1,14.51,10.47,-0.36,0.07,3,1.03,0,">1 nonsynonymous","S36L L187W",2
"lib2","SARS-CoV-2","AGCGAGTCCACCAAAA",24,314.44,10.84,0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGAGTCTCACATCT",5,161.24,10.77,-0.06,0.04,2.96,1.04,0,"1 nonsynonymous","N130F",1
"lib2","SARS-CoV-2","AGCGATAAATAAGATC",3,102.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9L A18L A105Y N120A G166C P177V T193Y V194G",8
"lib2","SARS-CoV-2","AGCGATAAATAGAAAG",4,0.22,NA,NA,NA,NA,NA,NA,"stop","N13* D34R C61N N157W G166R T201H",6
"lib2","SARS-CoV-2","AGCGATAAATCTATAA",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q P82E W106R N109I K132L",5
"lib2","SARS-CoV-2","AGCGATAACCACCTTT",2,24.87,10.29,-0.55,0.08,2.87,1.05,0,">1 nonsynonymous","K94N L187V",2
"lib2","SARS-CoV-2","AGCGATAAGATAACAA",1,77.44,10.35,-0.48,0.09,2.7,1.1,0,">1 nonsynonymous","A89S S184A",2
"lib2","SARS-CoV-2","AGCGATAATAACACGG",12,87.97,6,-4.84,2,2.5,1.22,0,"1 nonsynonymous","F70S",1
"lib2","SARS-CoV-2","AGCGATAATCAGAACT",2,3.18,NA,NA,NA,NA,NA,NA,"stop","Y21* P82H N120L",3
"lib2","SARS-CoV-2","AGCGATACAACTTCCC",11,6.36,NA,NA,NA,NA,NA,NA,"stop","S29* N64D A89D Y119A V173R T201S",6
"lib2","SARS-CoV-2","AGCGATACGTAGTGAT",1,26.48,6.02,-4.81,0.99,1.5,1.11,0.02,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","AGCGATACTTTACCAT",1,38.99,10.96,0.12,0.22,2.45,1.02,0.02,">1 nonsynonymous","N58D K198P",2
"lib2","SARS-CoV-2","AGCGATAGAACATGGC",9,188.94,8.54,-2.29,0.09,1.86,1.06,0,">1 nonsynonymous","E76N K87V Q176H",3
"lib2","SARS-CoV-2","AGCGATATCCCAGATT",1,11.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y50I G86V A145K",3
"lib2","SARS-CoV-2","AGCGATATCTATTCAA",1,5.65,6.3,-4.53,0.56,1.5,1.08,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","AGCGATCATGGGTGAG",7,47.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K56C G83N Y165G",3
"lib2","SARS-CoV-2","AGCGATGAAACATATA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","C61* A105Q S113H I138S",4
"lib2","SARS-CoV-2","AGCGATGCAACACTAC",2,56.81,9.92,-0.92,0.1,2.34,1.03,0,">1 nonsynonymous","N58S N151F L183V",3
"lib2","SARS-CoV-2","AGCGATGCCTATACAG",9,127.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N171F",1
"lib2","SARS-CoV-2","AGCGATTAAATTACTA",1,11.6,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A105G Y143E P149L",3
"lib2","SARS-CoV-2","AGCGATTACTCTCCGA",1,44.26,10.98,0.14,0.06,2.94,1.06,0,"1 nonsynonymous","L122Q",1
"lib2","SARS-CoV-2","AGCGATTGCGCTGTAA",4,42.1,8.74,-2.09,0.33,1.51,1.04,0.05,">1 nonsynonymous","S19T F44L F160D",3
"lib2","SARS-CoV-2","AGCGATTGGAATCTGC",2,39.33,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N4V V11R D98S N151T",4
"lib2","SARS-CoV-2","AGCGATTTCTGTTCCC",4,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y L38R Y50I G117I F156E",5
"lib2","SARS-CoV-2","AGCGCAAAGCCTGGCA",1,17.17,7.37,-3.47,0.32,1.5,1.04,0.03,">1 nonsynonymous","S43Y C61Q D137L",3
"lib2","SARS-CoV-2","AGCGCAAATAAGACTT",3,51.82,10.87,0.04,0.05,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCGCAACCGATACCC",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E P54K D68G D97V V103G K114L Y123F F167S",8
"lib2","SARS-CoV-2","AGCGCACATATTAATT",3,8.35,6.12,-4.72,1,1.5,1.06,0.01,">1 nonsynonymous","D90Y V103L",2
"lib2","SARS-CoV-2","AGCGCACTACCAAAAA",2,21.05,10.93,0.09,0.1,2.85,1.12,0,">1 nonsynonymous","R16S T55Y",2
"lib2","SARS-CoV-2","AGCGCACTATATCTCC",2,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C F44G I88T A105D V173R A190V",6
"lib2","SARS-CoV-2","AGCGCACTTTTTTTTA",1,24.89,10.32,-0.52,0.08,2.83,1,0,"1 nonsynonymous","P133C",1
"lib2","SARS-CoV-2","AGCGCATAAACAAGAA",12,164.81,10.49,-0.35,0.02,2.94,1.04,0,"1 nonsynonymous","Y123A",1
"lib2","SARS-CoV-2","AGCGCATAAGATAAGC",6,1.25,NA,NA,NA,NA,NA,NA,"stop","S19P A89F L95*",3
"lib2","SARS-CoV-2","AGCGCATACTTAACAA",1,23.42,10.09,-0.75,0.09,2.53,1,0,">1 nonsynonymous","I2E Y66L G83Y T100N E141T",5
"lib2","SARS-CoV-2","AGCGCATCCGTTCGCA",2,7.46,9.83,-1.01,0.17,1.97,1.14,0.02,">1 nonsynonymous","V37S A67F S139N S147Y",4
"lib2","SARS-CoV-2","AGCGCATGGGGCGGTA",1,14.55,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","T3R V20L V37N K56T E76T Y119S",6
"lib2","SARS-CoV-2","AGCGCATTAGCCCGAC",2,48.87,10.06,-0.77,0.12,2.49,1.01,0.01,">1 nonsynonymous","T3Y Y123T S200I",3
"lib2","SARS-CoV-2","AGCGCATTGCCCCGTA",7,54.19,10.86,0.03,0.05,2.99,1.02,0,"1 nonsynonymous","T55E",1
"lib2","SARS-CoV-2","AGCGCCAACATAAGAA",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L D68V I80M E135V N151V G155H H189S",7
"lib2","SARS-CoV-2","AGCGCCAAGTATTAGA",10,315.28,6,-4.84,2,1.5,1.11,0,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","AGCGCCAATCCTTGTG",2,18.09,8.49,-2.34,0.18,1.61,1.15,0.02,">1 nonsynonymous","P7T Y121W S184L",3
"lib2","SARS-CoV-2","AGCGCCACTATAAAAC",1,0.04,NA,NA,NA,NA,NA,NA,"stop","D59* D90M T201M",3
"lib2","SARS-CoV-2","AGCGCCAGAAACTCAT",2,10.25,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","K132V L183P",2
"lib2","SARS-CoV-2","AGCGCCATTCCTAAAG",4,20.27,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F99G Y119F G152R",3
"lib2","SARS-CoV-2","AGCGCCCGATAAAACA",3,80.68,10.18,-0.66,0.02,2.88,1.11,0,">1 nonsynonymous","V11F R78A",2
"lib2","SARS-CoV-2","AGCGCCGCGGAGGATT",4,154.05,9.75,-1.09,0.06,2.26,1.05,0,">1 nonsynonymous","C6R N64V",2
"lib2","SARS-CoV-2","AGCGCCTCACGATGGG",5,26.54,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","K87N L95S S139D",3
"lib2","SARS-CoV-2","AGCGCCTTACTAGTTG",8,73.73,6,-4.84,1.2,1.5,1.13,0.01,">1 nonsynonymous","K128T F134R P177F T201V",4
"lib2","SARS-CoV-2","AGCGCGAAACCTAAGT",2,2.02,NA,NA,NA,NA,NA,NA,"stop","Y35* C49A A105M",3
"lib2","SARS-CoV-2","AGCGCGAAGATAGTGC",5,61.31,10.81,-0.03,0.04,2.94,1.09,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","AGCGCGAAGCTAATGT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","I28Q C49G N64F A81* T100N",5
"lib2","SARS-CoV-2","AGCGCGCAGCAACAAA",4,27.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50S F62A A105S L122V I138L T148K Q176N",7
"lib2","SARS-CoV-2","AGCGCGCCCCACCCCA",3,4.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","AGCGCGGAGAAACACT",4,26.92,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P149N G152L F156G F167C",4
"lib2","SARS-CoV-2","AGCGCGGTACCGCAAA",8,0.74,NA,NA,NA,NA,NA,NA,"stop","T3D G9*",2
"lib2","SARS-CoV-2","AGCGCGTGCTTATACT",1,17.29,6,-4.84,2,3,1.22,0,">1 nonsynonymous","E10W V71E N110K",3
"lib2","SARS-CoV-2","AGCGCGTTAATACAAG",13,266.47,10.79,-0.05,0.03,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGCTAGACGAACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M S41A A67D",3
"lib2","SARS-CoV-2","AGCGCTAGCAACTAAA",7,0,NA,NA,NA,NA,NA,NA,"stop","F8Y V32H V37L N58K A81T T100P S108*",7
"lib2","SARS-CoV-2","AGCGCTAGTAGTTCTT",12,28.56,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","F44S L57Y I104P E154P",4
"lib2","SARS-CoV-2","AGCGCTATCCCTCGCT",7,139.37,10.64,-0.19,0.03,2.9,1.1,0,">1 nonsynonymous","T85R G155S",2
"lib2","SARS-CoV-2","AGCGCTATCGACGATC",2,26.1,11,0.17,0.11,2.76,1.25,0,"1 nonsynonymous","P197Q",1
"lib2","SARS-CoV-2","AGCGCTCCCGCCACGT",1,31.79,10.84,0.01,0.06,3,1.01,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","AGCGCTCTGTCCTACG",4,2.96,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib2","SARS-CoV-2","AGCGCTCTTACGTTTT",1,17.2,9.88,-0.95,0.1,2.21,1,0.01,">1 nonsynonymous","L38A F44P",2
"lib2","SARS-CoV-2","AGCGCTGCATCTATAC",13,201.44,10.74,-0.09,0.04,2.96,1.05,0,"1 nonsynonymous","G152R",1
"lib2","SARS-CoV-2","AGCGCTGCTGACACAG",6,0.43,NA,NA,NA,NA,NA,NA,"stop","C61T R127F G152*",3
"lib2","SARS-CoV-2","AGCGCTTCTTACGATA",6,149.28,10.81,-0.02,0.05,2.96,1.05,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","AGCGCTTGAACAAATA",1,0.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","AGCGCTTGAGATGACA",2,46.42,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F44P Q84N Y91N Y143I",4
"lib2","SARS-CoV-2","AGCGCTTTACAATATC",2,36.71,10.31,-0.52,0.05,2.79,1,0,">1 nonsynonymous","F134V T201L",2
"lib2","SARS-CoV-2","AGCGCTTTTATTTTCT",4,125.75,8,-2.83,0.08,1.63,1.1,0,">1 nonsynonymous","V32P T55L R73P",3
"lib2","SARS-CoV-2","AGCGGAAATTAGAATA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68L D98V Y143T",3
"lib2","SARS-CoV-2","AGCGGAAATTGGTTAT",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77C P149S Y165L",3
"lib2","SARS-CoV-2","AGCGGAACAGGCAGAT",2,12.55,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D75V F99M P149Q T170K P177Y",5
"lib2","SARS-CoV-2","AGCGGAACCAATTAAT",5,51.46,6.58,-4.25,0.3,1.5,1.14,0.01,">1 nonsynonymous","N40R F99T",2
"lib2","SARS-CoV-2","AGCGGAACTATTAACA",3,13,8.52,-2.32,0.12,2.87,1.01,0.01,">1 nonsynonymous","R73N Y119S",2
"lib2","SARS-CoV-2","AGCGGAATAGGAAACA",8,40.97,10.98,0.14,0.07,2.92,1.06,0,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","AGCGGAATCTAGAATC",1,12.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D59T D90S T100D N107Q I142L G155T",6
"lib2","SARS-CoV-2","AGCGGACCCACAGGAC",5,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I T140K",2
"lib2","SARS-CoV-2","AGCGGACCTATCACAA",1,56.24,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Q176P G196W",2
"lib2","SARS-CoV-2","AGCGGAGACAAATATT",4,59.11,6.3,-4.53,0.57,1.5,1.2,0.02,">1 nonsynonymous","F17I L38Y G86V D137S",4
"lib2","SARS-CoV-2","AGCGGAGGCCGGACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P Y35N N58G N157T",4
"lib2","SARS-CoV-2","AGCGGATAGGCCCCGA",3,11.37,10.73,-0.11,0.06,2.93,1.09,0,">1 nonsynonymous","K26E Y39F T201R",3
"lib2","SARS-CoV-2","AGCGGATAGTAACAGC",2,43.01,8.57,-2.27,0.08,2.27,1.06,0,">1 nonsynonymous","G51D Y66F G116N G174Q",4
"lib2","SARS-CoV-2","AGCGGATATCCAAGAG",3,25.56,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F8M V77Q W106Q K132N",4
"lib2","SARS-CoV-2","AGCGGATCGGTAATTG",2,41.82,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S36L W106L R136F",3
"lib2","SARS-CoV-2","AGCGGATTAAAAACTA",8,82.29,9.42,-1.42,0.05,2.93,1.07,0,">1 nonsynonymous","F44Q L125V",2
"lib2","SARS-CoV-2","AGCGGCAAACCTTGTG",3,51.33,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N109V G117F G146V",3
"lib2","SARS-CoV-2","AGCGGCATCATGTCGA",6,0.23,NA,NA,NA,NA,NA,NA,"stop","K56F T140A R179*",3
"lib2","SARS-CoV-2","AGCGGCATCCAACCAT",2,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S Y159E",2
"lib2","SARS-CoV-2","AGCGGCCCTAGTGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","R73*",1
"lib2","SARS-CoV-2","AGCGGCCTAGCCTACA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V R136T P197M",3
"lib2","SARS-CoV-2","AGCGGCGCGATCCATA",8,80.01,10.12,-0.71,0.05,2.8,1.04,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","AGCGGCTTAAAAGACG",6,3.72,NA,NA,NA,NA,NA,NA,"stop","I2V I28* W106L T201*",4
"lib2","SARS-CoV-2","AGCGGCTTGACTCCGG",9,239.28,10.85,0.02,0.04,2.89,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCGGGAAACTAGGAG",16,85.82,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S45R L95S",2
"lib2","SARS-CoV-2","AGCGGGAATAGTATTG",3,36.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14E L38P F47L T55A Q168R Q176S",6
"lib2","SARS-CoV-2","AGCGGGAGTCAGCCAC",1,35,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","I80A D90Y",2
"lib2","SARS-CoV-2","AGCGGGCAGTCTATAG",2,5.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43P R124P",2
"lib2","SARS-CoV-2","AGCGGGCCAAGTCCTC",8,33.42,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V65L I80T I142Y L188P",4
"lib2","SARS-CoV-2","AGCGGGCTCCCTAATT",3,45.05,10.17,-0.67,0.08,2.73,1.03,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","AGCGGGCTGAGAACAT",4,2.21,NA,NA,NA,NA,NA,NA,"stop","Y39S S45M K87E C158*",4
"lib2","SARS-CoV-2","AGCGGGTAAGATTGAT",3,22.3,9.58,-1.26,0.06,2.5,1,0,">1 nonsynonymous","P133N V153G S200G",3
"lib2","SARS-CoV-2","AGCGGTAACAAACTCG",1,33.28,10.74,-0.1,0.06,2.84,1.14,0,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","AGCGGTAACTAATAAG",2,5.23,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","V77E N107S S139N",3
"lib2","SARS-CoV-2","AGCGGTACTCTTGACC",1,44.67,10.11,-0.72,0.08,2.69,1.08,0,">1 nonsynonymous","L5H P149R S164L",3
"lib2","SARS-CoV-2","AGCGGTCTCTTCAACT",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L K114W",2
"lib2","SARS-CoV-2","AGCGGTCTTACACAAT",10,115.04,6.2,-4.63,0.53,1.5,1.19,0.01,">1 nonsynonymous","D90Y N107L",2
"lib2","SARS-CoV-2","AGCGGTCTTTCCTATT",2,11.59,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","G51K Q84N L95W K128T",4
"lib2","SARS-CoV-2","AGCGGTGACGATAGAC",11,0.46,NA,NA,NA,NA,NA,NA,"stop","Y35C D90* W106M V173N",4
"lib2","SARS-CoV-2","AGCGGTGACTCTGCCC",15,627.97,9.7,-1.14,0.03,2.94,1.06,0,"1 nonsynonymous","Y119F",1
"lib2","SARS-CoV-2","AGCGGTGAGAAAACAG",4,30.05,7.52,-3.32,0.25,1.5,1.14,0.02,">1 nonsynonymous","C6S P54I T63W E141C",4
"lib2","SARS-CoV-2","AGCGGTTAGAGCCAAA",1,12.04,9.71,-1.13,0.19,2.34,1.07,0.02,">1 nonsynonymous","S45I K114F",2
"lib2","SARS-CoV-2","AGCGGTTCATTAATCC",3,222.92,9.09,-1.75,0.04,2.91,1.1,0,">1 nonsynonymous","T100I A145Y",2
"lib2","SARS-CoV-2","AGCGTAAACTTGTAAA",12,301.33,9.63,-1.2,0.03,2.93,1.07,0,">1 nonsynonymous","A145L P197L",2
"lib2","SARS-CoV-2","AGCGTAAATGCAGTCC",2,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G C49V I88G S108L E135G Y178R",6
"lib2","SARS-CoV-2","AGCGTAACGCAAGATT",8,104.9,10.4,-0.44,0.05,2.88,1.07,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","AGCGTAACGTCTGTCA",8,127.96,10.6,-0.23,0.02,2.97,1.04,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","AGCGTAAGGGTCACAC",6,32.15,9.16,-1.68,0.18,2.18,1.08,0.02,">1 nonsynonymous","F8A A14S L125A",3
"lib2","SARS-CoV-2","AGCGTAATAAATTCGG",5,34.06,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6G C49Y G155H",3
"lib2","SARS-CoV-2","AGCGTACAAAGGTCCG",7,117.56,10.16,-0.67,0.02,2.92,1.05,0,">1 nonsynonymous","C6S L122N",2
"lib2","SARS-CoV-2","AGCGTACTAAAATATA",6,29.64,6.4,-4.43,0.4,1.5,1.19,0.01,">1 nonsynonymous","V37H N64T D90S L122S Q144L S164L",6
"lib2","SARS-CoV-2","AGCGTAGAACAAAGTA",3,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V F160V",2
"lib2","SARS-CoV-2","AGCGTAGAACGCTGTC",3,19.36,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D34R Y121G",2
"lib2","SARS-CoV-2","AGCGTAGTCCATTGTA",2,14.12,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","N13Q V37D G51V I88V D90Y",5
"lib2","SARS-CoV-2","AGCGTATAAACGTACA",7,143.92,10.83,-0.01,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGTATAACTAAAGG",5,43.57,6,-4.84,1.77,1.5,1.19,0.02,">1 nonsynonymous","S41M G83S D90T N118A E135C S184N",6
"lib2","SARS-CoV-2","AGCGTATGAAGCCGAC",6,56.84,10.56,-0.27,0.07,2.84,1.16,0,">1 nonsynonymous","N40M N110E",2
"lib2","SARS-CoV-2","AGCGTATTATATGAAA",5,1.55,NA,NA,NA,NA,NA,NA,"stop","L57S Q84G L122* Q144K A190H",5
"lib2","SARS-CoV-2","AGCGTATTCATAAGAC",1,8.9,10.14,-0.7,0.08,2.95,1.09,0.01,">1 nonsynonymous","F44I L95I",2
"lib2","SARS-CoV-2","AGCGTCTTGACCGGCC",17,285.26,10.84,0,0.03,2.96,1.06,0,"1 nonsynonymous","K199F",1
"lib2","SARS-CoV-2","AGCGTGAACCAAAAAT",3,84.46,10.08,-0.75,0.1,2.44,1,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","AGCGTGACCAATTTAA",4,51.71,10.86,0.02,0.05,3,1.01,0,">1 nonsynonymous","G9N I138L",2
"lib2","SARS-CoV-2","AGCGTGACGTATGTAT",5,15.02,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","V32I C49S R78L D98Y K128A R136I",6
"lib2","SARS-CoV-2","AGCGTGATTGGAAGTA",14,120.07,9.02,-1.82,0.27,1.5,1,0.03,">1 nonsynonymous","D98S F134I E141Y K198S",4
"lib2","SARS-CoV-2","AGCGTGCAAAACTTAG",9,146.85,10.7,-0.14,0.02,2.99,1.02,0,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","AGCGTGCAACCTAATC",1,215.41,10.75,-0.08,0.03,3,1.02,0,">1 nonsynonymous","K56V T201E",2
"lib2","SARS-CoV-2","AGCGTGCACAGAGACA",1,14.53,9.18,-1.66,0.36,1.88,1.04,0.01,">1 nonsynonymous","A22T Q79R",2
"lib2","SARS-CoV-2","AGCGTGCCTTTCTCCT",2,27.44,10.29,-0.54,0.07,2.79,1.19,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","AGCGTGCGCCGAATTT",1,11.66,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95T D112K G152C",3
"lib2","SARS-CoV-2","AGCGTGTCAAAATGCT",2,40.17,10.84,0,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGTGTTTGGCTGCA",7,68.53,9.35,-1.48,0.1,2.33,1.11,0,">1 nonsynonymous","L5W S41R K132L E141T P149G G174R",6
"lib2","SARS-CoV-2","AGCGTTAAAAAGACTG",8,179.49,10.32,-0.52,0.03,2.81,1.07,0,">1 nonsynonymous","S41A Y91N L125I",3
"lib2","SARS-CoV-2","AGCGTTAAAATAATGG",4,9.45,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V37H C49G D90N A145V",4
"lib2","SARS-CoV-2","AGCGTTAAGCTAAAAC",3,5.09,9.92,-0.92,0.23,2.35,1,0.03,">1 nonsynonymous","D34S D98L",2
"lib2","SARS-CoV-2","AGCGTTATACGGTTAC",3,94.93,10.12,-0.71,0.07,2.34,1.03,0,">1 nonsynonymous","Y91R K128P",2
"lib2","SARS-CoV-2","AGCGTTCAAATAATTA",8,155.48,10.25,-0.58,0.05,2.85,1.04,0,">1 nonsynonymous","F47T G146S",2
"lib2","SARS-CoV-2","AGCGTTCACAACTCAA",6,82.31,10.13,-0.71,0.04,2.91,1.05,0,"1 nonsynonymous","R73T",1
"lib2","SARS-CoV-2","AGCGTTCCGTAAGCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26R",1
"lib2","SARS-CoV-2","AGCGTTCTCGCATCCC",10,75.18,10.33,-0.5,0.04,2.9,1.05,0,"1 nonsynonymous","G83T",1
"lib2","SARS-CoV-2","AGCGTTCTTGGAAATG",11,100.07,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S19I D98H V115T P161N",4
"lib2","SARS-CoV-2","AGCGTTGAAAAATTGC",4,123.79,9.14,-1.7,0.05,2.6,1.06,0,">1 nonsynonymous","K87G T140W P149Q",3
"lib2","SARS-CoV-2","AGCGTTGAAGTGGATA",3,109.62,10.82,-0.02,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCGTTGAGTCTTCGA",4,8.04,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S36E V77P I88L P191T",4
"lib2","SARS-CoV-2","AGCGTTTGGGCTTCAT",2,10.31,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","K48S G86W P96A",3
"lib2","SARS-CoV-2","AGCTAAAAAAATCACA",3,21.61,10.33,-0.51,0.04,2.93,1.03,0,">1 nonsynonymous","N40W S139N",2
"lib2","SARS-CoV-2","AGCTAAAAACAATAGC",5,74.2,10.81,-0.03,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTAAAAGCCCCGTC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","L5T D112W N120E K128* A145C",5
"lib2","SARS-CoV-2","AGCTAAAAGGCTGACT",1,12.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41L Q84T I104K",3
"lib2","SARS-CoV-2","AGCTAAAATAACTACC",2,9.51,10.29,-0.55,0.71,1.84,1,0.07,">1 nonsynonymous","Y91E T201L",2
"lib2","SARS-CoV-2","AGCTAAACATAATCAA",4,126.13,10.69,-0.14,0.05,2.89,1.15,0,">1 nonsynonymous","R78V T148N",2
"lib2","SARS-CoV-2","AGCTAAACATGTGATT",1,40.27,10.8,-0.03,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTAAACCCAGCCGC",1,18.52,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R27V N64S Y93P T140S N151R",5
"lib2","SARS-CoV-2","AGCTAAAGAAAAAACC",1,5.89,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14R T46W P82W K198T",4
"lib2","SARS-CoV-2","AGCTAAATAGGGCGGA",1,21.39,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V65D K128I",2
"lib2","SARS-CoV-2","AGCTAACACAAGATGA",2,21.3,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D90S P96D Q144R F156K L162N",5
"lib2","SARS-CoV-2","AGCTAACACCTTATAT",2,46.5,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D98S V103C S129P P169E",4
"lib2","SARS-CoV-2","AGCTAACAGTTAATCG",2,63.58,9.35,-1.48,0.12,1.7,1.07,0,">1 nonsynonymous","L38R L60C K114A",3
"lib2","SARS-CoV-2","AGCTAACATATTCTTA",2,52.11,10.41,-0.43,0.06,2.95,1.07,0,">1 nonsynonymous","K56G D90C T201Q",3
"lib2","SARS-CoV-2","AGCTAACATGGAATCT",11,108.45,10.67,-0.17,0.03,2.94,1.04,0,">1 nonsynonymous","S29F D97A",2
"lib2","SARS-CoV-2","AGCTAACCAAGCTTGA",1,21.24,9.88,-0.95,0.14,2.08,1.07,0.01,">1 nonsynonymous","P7L E135F",2
"lib2","SARS-CoV-2","AGCTAACCATGATGGC",13,162.61,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L57Q P177V",2
"lib2","SARS-CoV-2","AGCTAACCTGGTCTTT",5,66.83,9.46,-1.37,0.06,2.83,1.14,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","AGCTAACTGAAACAAG",5,36.62,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L38T N58S V65W A89T G152R",5
"lib2","SARS-CoV-2","AGCTAACTTCCTGGAG",8,24.72,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F12K N58G D98N V103K L162C",5
"lib2","SARS-CoV-2","AGCTAAGATACATTAA",2,1.54,NA,NA,NA,NA,NA,NA,"stop","S41R Y66H L131* Y165S",4
"lib2","SARS-CoV-2","AGCTAAGCACTGTAAA",6,128.77,10.8,-0.04,0.03,2.96,1.03,0,"1 nonsynonymous","V52C",1
"lib2","SARS-CoV-2","AGCTAAGCTCTCACTG",5,14.31,10.68,-0.16,0.09,2.72,1.29,0,"1 nonsynonymous","V37Q",1
"lib2","SARS-CoV-2","AGCTAAGGAGGGCTAC",2,20.2,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V52C G86T A105V",3
"lib2","SARS-CoV-2","AGCTAAGGCAAATTGA",4,3.34,NA,NA,NA,NA,NA,NA,"stop","A18* V37T Y66I G83L W106V T201V",6
"lib2","SARS-CoV-2","AGCTAAGTAGAGAATC",2,9.24,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V52H C61S D68I G101D",4
"lib2","SARS-CoV-2","AGCTAAGTCAGTTTCA",14,74.59,6,-4.84,1.65,2.39,1.18,0,">1 nonsynonymous","C31S S41Y C49V N107S P197T",5
"lib2","SARS-CoV-2","AGCTAAGTCCAGGTAA",5,58.65,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14T T100A R127P",3
"lib2","SARS-CoV-2","AGCTAATAAAGGCATG",4,115.83,10.9,0.06,0.06,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTAATAAATAAATA",9,5.52,NA,NA,NA,NA,NA,NA,"stop","N64G I72* V77A T100G W106R A190P T201Y",7
"lib2","SARS-CoV-2","AGCTAATATTCACAAT",10,62.36,9.28,-1.56,0.14,1.63,1.13,0.01,">1 nonsynonymous","A81L G152R",2
"lib2","SARS-CoV-2","AGCTAATCAAATATCA",8,64.63,10.17,-0.66,0.09,2.37,1,0,">1 nonsynonymous","T15S T85N F99Y",3
"lib2","SARS-CoV-2","AGCTAATCGCAAAACG",1,0.53,NA,NA,NA,NA,NA,NA,"stop","V11P R73M D90S P169V G174*",5
"lib2","SARS-CoV-2","AGCTAATGCGATTAGT",5,202.62,10.87,0.03,0.04,2.98,1.04,0,">1 nonsynonymous","Y35L T201M",2
"lib2","SARS-CoV-2","AGCTAATTAGCCTAGG",1,49.04,8.38,-2.46,0.14,2.27,1.08,0.01,">1 nonsynonymous","C6K G166V",2
"lib2","SARS-CoV-2","AGCTAATTATGACCCA",5,28.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L38S F62G D68R A89E S139C",5
"lib2","SARS-CoV-2","AGCTACAAAAAATAAA",2,13.36,9.66,-1.18,0.26,1.62,1.1,0.04,">1 nonsynonymous","W106E Q168R T201Q",3
"lib2","SARS-CoV-2","AGCTACAAAACAGAAG",14,4.61,NA,NA,NA,NA,NA,NA,"stop","R27* D98E",2
"lib2","SARS-CoV-2","AGCTACAACATTGGTG",5,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L E154N",2
"lib2","SARS-CoV-2","AGCTACAGCCCTAACA",6,9.27,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3K S45G S69G N107R T201S",5
"lib2","SARS-CoV-2","AGCTACAGGGCTCTAA",5,0.85,NA,NA,NA,NA,NA,NA,"stop","L5T N13I T55Y S129G C150*",5
"lib2","SARS-CoV-2","AGCTACATAGAGCATT",4,17.66,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","R78S R136P Q168P",3
"lib2","SARS-CoV-2","AGCTACATTCTACGAT",10,188.22,8.58,-2.25,0.08,2.73,1.05,0,">1 nonsynonymous","G9D V37H F134T G166L",4
"lib2","SARS-CoV-2","AGCTACCAAATCAAAC",3,99.73,10.79,-0.04,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTACCAACGCGATG",7,53.14,10.51,-0.33,0.04,2.94,1.06,0,"1 nonsynonymous","V115G",1
"lib2","SARS-CoV-2","AGCTACCACTCTTTAC",1,8.26,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I80G N107R F126V",3
"lib2","SARS-CoV-2","AGCTACCCCGTTCCTA",10,44.04,6,-4.84,0.56,2.23,1.18,0,">1 nonsynonymous","V77A P82A",2
"lib2","SARS-CoV-2","AGCTACCGCGGACTTC",4,2.96,NA,NA,NA,NA,NA,NA,"stop","C6* V103C S139L T148R",4
"lib2","SARS-CoV-2","AGCTACCTAGGCCACA",12,1035.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19M E76Y",2
"lib2","SARS-CoV-2","AGCTACGACGTTGCAT",2,13.48,10.91,0.07,0.12,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTACGATATGTAAT",4,64.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39W F47P D68A W106A Y143M",5
"lib2","SARS-CoV-2","AGCTACGATCAAATAT",6,53.69,6,-4.84,1.36,1.5,1.09,0.01,">1 nonsynonymous","R25S C49N",2
"lib2","SARS-CoV-2","AGCTACGCACTGTTGG",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y F44M N120E K128E P177T",5
"lib2","SARS-CoV-2","AGCTACTACATCACCG",4,19.65,6.36,-4.47,0.62,1.5,1.13,0.02,">1 nonsynonymous","C6G C49T",2
"lib2","SARS-CoV-2","AGCTACTCGAACATTG",17,226.63,10.67,-0.17,0.04,2.92,1.07,0,">1 nonsynonymous","Q84T K87R",2
"lib2","SARS-CoV-2","AGCTACTCGTACAATA",2,24.91,10.85,0.01,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCTACTGAGGATATT",5,150.89,8.28,-2.56,0.09,2.38,1.1,0,">1 nonsynonymous","S36M Y175V",2
"lib2","SARS-CoV-2","AGCTACTGGCTGATCT",12,162.08,9.87,-0.97,0.04,2.53,1.06,0,">1 nonsynonymous","A14V S41C H189V",3
"lib2","SARS-CoV-2","AGCTACTTTATTAGAT",5,77.4,9.98,-0.86,0.05,2.89,1.11,0,">1 nonsynonymous","S41A T55H G83K P169F",4
"lib2","SARS-CoV-2","AGCTAGAAAGTGATGA",21,225.94,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A105M N130D R136V",3
"lib2","SARS-CoV-2","AGCTAGACCCACCAAT",4,7.51,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","S19F S113H N120Y",3
"lib2","SARS-CoV-2","AGCTAGAGAACAAAAA",3,83.34,10.84,0,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTAGAGAATTATCA",1,1.26,NA,NA,NA,NA,NA,NA,"stop","S43* D112G",2
"lib2","SARS-CoV-2","AGCTAGAGACGGGTGC",3,52.53,9.73,-1.11,0.12,2.04,1.06,0,">1 nonsynonymous","C31R S41W T85G",3
"lib2","SARS-CoV-2","AGCTAGATAAAAGCCA",1,9.03,9.68,-1.15,0.13,2.09,1.07,0.01,">1 nonsynonymous","N13T A105G S200I",3
"lib2","SARS-CoV-2","AGCTAGATAATTGTAT",4,56.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36K A67N D98Q F160R",4
"lib2","SARS-CoV-2","AGCTAGATAATTTAGT",4,0.04,NA,NA,NA,NA,NA,NA,"stop","I138R Y165*",2
"lib2","SARS-CoV-2","AGCTAGCACGACCTCG",6,55.72,10,-0.84,0.07,2.82,1.08,0,">1 nonsynonymous","Y121W L122F",2
"lib2","SARS-CoV-2","AGCTAGCCAACCCTAT",12,86.72,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C31R W106E D112R",3
"lib2","SARS-CoV-2","AGCTAGGAATGTAAAG",1,23.29,10.87,0.04,0.09,2.96,1.07,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","AGCTAGGACTTTCGTA",5,108.4,9.18,-1.66,0.09,2.24,1.1,0,">1 nonsynonymous","V37A N107T E141S",3
"lib2","SARS-CoV-2","AGCTAGGAGGCCGGTT",4,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T Y66C T85D Y119L R127V Y143L",6
"lib2","SARS-CoV-2","AGCTAGGGAAGTGTAA",2,42.98,10.66,-0.17,0.08,2.97,1.08,0,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","AGCTAGGGTTAGTTCA",8,105.31,7.37,-3.46,0.16,1.5,1.14,0.01,">1 nonsynonymous","C31S V115A Y121N",3
"lib2","SARS-CoV-2","AGCTAGGTTGTGAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","E76V N130* I142F P149T",4
"lib2","SARS-CoV-2","AGCTATAAAATCCCTT",11,36.53,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1L A14I S41G Y143G P161T",5
"lib2","SARS-CoV-2","AGCTATAAAGACAAGG",6,29.28,10.85,0.02,0.08,2.96,1.05,0,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","AGCTATAACTACCATA",1,18.5,8.93,-1.9,0.09,2.94,1.1,0,">1 nonsynonymous","L5R F134Y T170C",3
"lib2","SARS-CoV-2","AGCTATAAGAAGCTAT",2,6.47,10.02,-0.82,0.37,2.21,1,0.04,">1 nonsynonymous","Q84W K198F",2
"lib2","SARS-CoV-2","AGCTATAATCATTTAA",5,47.07,10.22,-0.62,0.07,2.88,1.11,0,">1 nonsynonymous","S53Y E141Y",2
"lib2","SARS-CoV-2","AGCTATACACATAATA",5,52.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N92M Y165G",2
"lib2","SARS-CoV-2","AGCTATACATTCGCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N4V C61Y D98* D112Y K128F",5
"lib2","SARS-CoV-2","AGCTATACTAAACCTG",2,16.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F12K K94S P149N F185G",4
"lib2","SARS-CoV-2","AGCTATAGAAAAGAAA",6,42.3,10.82,-0.01,0.04,3,1.01,0,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","AGCTATAGACTAAATA",9,54.49,6,-4.84,1.22,1.5,1.16,0.01,">1 nonsynonymous","R25T Y93M",2
"lib2","SARS-CoV-2","AGCTATAGTTGACATA",6,45.93,10.34,-0.49,0.07,2.94,1.06,0,"1 nonsynonymous","A81M",1
"lib2","SARS-CoV-2","AGCTATATGATGATTA",14,257.73,10.03,-0.8,0.03,2.85,1.06,0,">1 nonsynonymous","L38I D90T G174N",3
"lib2","SARS-CoV-2","AGCTATCAAAAAAAAA",8,183.83,9.85,-0.98,0.08,2.33,1.08,0,">1 nonsynonymous","G9A R16Y F62G L95M",4
"lib2","SARS-CoV-2","AGCTATCCCCCCGAAT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","T63F N92* T100L",3
"lib2","SARS-CoV-2","AGCTATCCCGACACGC",1,30.53,10.74,-0.09,0.07,2.82,1.19,0,">1 nonsynonymous","I28L S200Y",2
"lib2","SARS-CoV-2","AGCTATGATTAGCAAA",2,34.83,10.45,-0.39,0.08,2.81,1.02,0,">1 nonsynonymous","A14C K56M",2
"lib2","SARS-CoV-2","AGCTATGCCATAATTT",14,169.67,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","G172R",1
"lib2","SARS-CoV-2","AGCTATGCTTGTAAGG",2,1.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106E",1
"lib2","SARS-CoV-2","AGCTATGGTGGCCCAT",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N92D N110T I138A F156*",4
"lib2","SARS-CoV-2","AGCTATTATAATGCCT",6,33.59,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D90Y F99V G146P",3
"lib2","SARS-CoV-2","AGCTATTCCTTTTAGT",5,91.92,10.84,0,0.06,2.91,1.09,0,">1 nonsynonymous","F160R A190H",2
"lib2","SARS-CoV-2","AGCTATTTAAAGTAAA",1,10.12,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","R25P T140C",2
"lib2","SARS-CoV-2","AGCTATTTAGAACCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10T F47* K128R F156L",4
"lib2","SARS-CoV-2","AGCTATTTCCTGGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3* A33V L122A I138G A190T",5
"lib2","SARS-CoV-2","AGCTCAACGATTAAAA",8,1.97,NA,NA,NA,NA,NA,NA,"stop","D34* I88C L95T Y119D",4
"lib2","SARS-CoV-2","AGCTCAACGGTTTTAA",1,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106D",1
"lib2","SARS-CoV-2","AGCTCAAGCAATCACT",6,75.73,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V103T G166E",2
"lib2","SARS-CoV-2","AGCTCAAGGTTTTATA",10,143.72,10.25,-0.59,0.03,2.94,1.09,0,">1 nonsynonymous","K114N G166N",2
"lib2","SARS-CoV-2","AGCTCAAGTCCGCTAG",8,18.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S45I P82V L122I S129K",4
"lib2","SARS-CoV-2","AGCTCAATATCATGGA",2,43.55,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D68V G146T",2
"lib2","SARS-CoV-2","AGCTCAATTCACTTCC",4,61.65,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D34Q S113V Q144T",3
"lib2","SARS-CoV-2","AGCTCACAATAAGACC",1,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","AGCTCACACCTTCTCG",8,96.21,7.28,-3.55,0.2,1.5,1.14,0.01,">1 nonsynonymous","L5H V32E S113P",3
"lib2","SARS-CoV-2","AGCTCACAGAGTTTGA",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y F44A Y119T",3
"lib2","SARS-CoV-2","AGCTCACATCAAATAG",1,41.31,10.79,-0.04,0.06,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTCACCACAAGTTT",4,26.54,6,-4.84,2,1.5,1.1,0.02,"1 nonsynonymous","P177F",1
"lib2","SARS-CoV-2","AGCTCACCGACATTAA",1,12.58,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A81L I142V P161T H189L",4
"lib2","SARS-CoV-2","AGCTCACCTACGACCT",3,47.34,10.92,0.08,0.06,2.98,1.03,0,"1 nonsynonymous","K198V",1
"lib2","SARS-CoV-2","AGCTCACGAACTACAT",2,17.95,10.87,0.04,0.06,3,1.02,0,"1 nonsynonymous","T148H",1
"lib2","SARS-CoV-2","AGCTCACGAATGTTCT",1,42.22,8.48,-2.35,0.13,2.99,1.04,0.01,">1 nonsynonymous","G83R G117D L122S G166E",4
"lib2","SARS-CoV-2","AGCTCACTACTCTAAT",8,42.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V S41G A81N A145S",4
"lib2","SARS-CoV-2","AGCTCACTCCAGGGGC",1,29.56,10.24,-0.59,0.11,2.64,1.12,0.01,">1 nonsynonymous","N40W S129F",2
"lib2","SARS-CoV-2","AGCTCACTGTTACCTA",5,81.32,7.43,-3.4,0.3,1.5,1.08,0.03,">1 nonsynonymous","G9W D90S R136P",3
"lib2","SARS-CoV-2","AGCTCACTTATATATT",6,5.93,NA,NA,NA,NA,NA,NA,"stop","G9D K48I A81R V103W P133R K199*",6
"lib2","SARS-CoV-2","AGCTCACTTCTCATTG",10,99.88,9.97,-0.87,0.08,2.33,1.02,0,">1 nonsynonymous","Y39L K48A V71L A105W",4
"lib2","SARS-CoV-2","AGCTCAGACTTTGGTC",4,56.11,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L60T Q84I K94E N107L Y121H",5
"lib2","SARS-CoV-2","AGCTCAGAGAAGTGAC",8,13.59,6.7,-4.13,0.58,3,1.5,0.02,">1 nonsynonymous","C6D T15F V37M K56L K87R P96H W106A P177S",8
"lib2","SARS-CoV-2","AGCTCAGATACACGAA",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E K114H Y121E E135T I142Y",5
"lib2","SARS-CoV-2","AGCTCAGGATACTACT",2,91.51,10.92,0.08,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTCAGGTTAAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K Y35P Y121T",3
"lib2","SARS-CoV-2","AGCTCAGTATGACAAA",8,137.65,10.11,-0.73,0.04,2.9,1.05,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","AGCTCATAAACTATAA",10,132.21,10.16,-0.68,0.06,2.7,1.06,0,">1 nonsynonymous","A14E Y66T S139N",3
"lib2","SARS-CoV-2","AGCTCATAATGTCTTA",1,32.54,10.8,-0.04,0.05,3,1.01,0,">1 nonsynonymous","Y123V Q163G T201Y",3
"lib2","SARS-CoV-2","AGCTCATCTCCAGACT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q K94W K132Y",3
"lib2","SARS-CoV-2","AGCTCATGGGAGATAA",8,22.88,9.81,-1.03,0.27,1.63,1.05,0.07,">1 nonsynonymous","V20G S41Q Y93M",3
"lib2","SARS-CoV-2","AGCTCATTAATGGACA",11,202.39,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y50V Q176K",2
"lib2","SARS-CoV-2","AGCTCCAATGTTATGA",2,19.95,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S19L P82R",2
"lib2","SARS-CoV-2","AGCTCCACACCGATGC",4,105.02,10.86,0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTCCCCCACAGATA",2,35.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43W K87L L95N N110L Y175G",5
"lib2","SARS-CoV-2","AGCTCCCCCCCAAATG",1,49.12,10.52,-0.31,0.05,2.92,1.07,0,">1 nonsynonymous","P7D K26M F44R",3
"lib2","SARS-CoV-2","AGCTCCCCCGCGCAGT",2,44.67,10.58,-0.26,0.07,2.91,1.04,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","AGCTCCCTCAGTACTG",3,36.04,10.75,-0.09,0.06,3,1.02,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","AGCTCCGATTGAACTA",2,29.39,10.92,0.09,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTCCGTGAATTCTG",3,8.47,6.26,-4.58,2,1.5,1.13,0.05,">1 nonsynonymous","T15N P82K P96S",3
"lib2","SARS-CoV-2","AGCTCCTACCGCGAGA",5,0.34,NA,NA,NA,NA,NA,NA,"stop","T3* C158R",2
"lib2","SARS-CoV-2","AGCTCGAAAAGACTCA",4,34.51,9.03,-1.81,0.22,1.5,1,0.02,">1 nonsynonymous","A14V S29F A81K",3
"lib2","SARS-CoV-2","AGCTCGAAATCGGTCC",14,62.57,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F17E S36E P54D K94M T100G",5
"lib2","SARS-CoV-2","AGCTCGAGTCTCTTGA",20,339.03,10.18,-0.66,0.02,2.98,1.03,0,">1 nonsynonymous","N4A G155D",2
"lib2","SARS-CoV-2","AGCTCGAGTGAATTAA",12,254.11,9.71,-1.12,0.03,2.89,1.04,0,">1 nonsynonymous","Y119R L162M",2
"lib2","SARS-CoV-2","AGCTCGATTATTGGCG",4,15.15,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","AGCTCGCAAAGATGTG",3,142.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V32R Y123D R136L Y159P",4
"lib2","SARS-CoV-2","AGCTCGCTCCGACATG",9,160.15,10.79,-0.04,0.03,2.99,1.04,0,">1 nonsynonymous","T46H P149L P197N",3
"lib2","SARS-CoV-2","AGCTCGGTCTAACCAT",11,82.32,10.18,-0.66,0.06,2.68,1.02,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","AGCTCGTAAGCGTGCA",7,60.24,9.63,-1.2,0.05,2.13,1.01,0,">1 nonsynonymous","P7H N40H T85E T100E L125M",5
"lib2","SARS-CoV-2","AGCTCGTACTGGGAGA",6,66.34,9.59,-1.25,0.08,1.84,1.08,0,">1 nonsynonymous","N58Y Q84L S184I",3
"lib2","SARS-CoV-2","AGCTCGTCAATATAGC",2,46.04,9.7,-1.14,0.08,2.4,1.1,0,">1 nonsynonymous","D90K G116Y P149S",3
"lib2","SARS-CoV-2","AGCTCTAAAATGCATT",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y K114F",2
"lib2","SARS-CoV-2","AGCTCTAAAGTGATCT",5,140.28,6.64,-4.2,0.21,1.5,1.11,0.01,">1 nonsynonymous","D59V Y119E F126A",3
"lib2","SARS-CoV-2","AGCTCTACATATTCTT",2,23.67,10.74,-0.09,0.09,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTCTACCACAGACT",3,27.01,6.95,-3.89,0.69,1.5,1.21,0.07,">1 nonsynonymous","T3K Y50Q T140W",3
"lib2","SARS-CoV-2","AGCTCTAGAAACTGAC",6,32.61,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A67N Q84A",2
"lib2","SARS-CoV-2","AGCTCTAGACAATTTA",4,67.55,10.69,-0.15,0.04,2.95,1.07,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","AGCTCTAGATTCTAAT",3,30.45,10.78,-0.05,0.11,2.86,1.07,0.01,"1 nonsynonymous","T63E",1
"lib2","SARS-CoV-2","AGCTCTAGTAGGTTAC",3,50.11,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K26L S43Y G86Q G146M",4
"lib2","SARS-CoV-2","AGCTCTAGTCCATAAG",2,104.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31F S41P R78E N120I Q176R",5
"lib2","SARS-CoV-2","AGCTCTCACAAATCCG",7,7.91,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","P7N V103P G166L",3
"lib2","SARS-CoV-2","AGCTCTCGTACATGCA",3,12.17,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C6A F99H N151L Q163G",4
"lib2","SARS-CoV-2","AGCTCTCTGAGGTACT",2,12.81,7.95,-2.89,0.23,1.5,1.2,0.02,">1 nonsynonymous","L5M N40R S45Q A89V E141R E154T",6
"lib2","SARS-CoV-2","AGCTCTCTTCAAATCT",3,29.42,10.69,-0.14,0.03,2.94,1.04,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","AGCTCTCTTGATAGAA",2,39.11,9.9,-0.93,0.13,2.32,1.02,0.01,">1 nonsynonymous","P96K N151Q",2
"lib2","SARS-CoV-2","AGCTCTGAACAAAAGT",16,127.35,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C102A S139A C195A",3
"lib2","SARS-CoV-2","AGCTCTGAACAAACAG",3,2,NA,NA,NA,NA,NA,NA,"stop","L57* G83V",2
"lib2","SARS-CoV-2","AGCTCTGCATGTATTA",10,7.22,NA,NA,NA,NA,NA,NA,"stop","D34I N58* K94V Y119T L162R",5
"lib2","SARS-CoV-2","AGCTCTTAAAGCTATA",3,199.29,9.03,-1.8,0.06,2.91,1.09,0,">1 nonsynonymous","P7S G116F Y175H K199T",4
"lib2","SARS-CoV-2","AGCTCTTAACGTTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A22C G86* G174Q",3
"lib2","SARS-CoV-2","AGCTCTTACTCATTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","F12Q D97V G155R V173*",4
"lib2","SARS-CoV-2","AGCTCTTGTAAAAATG",2,20.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N1I P82R A89V L131R",4
"lib2","SARS-CoV-2","AGCTCTTTTTTTACAT",1,25.41,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S43T Y93P W106L Q176H",4
"lib2","SARS-CoV-2","AGCTGAAAACAGTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* D34S T148V F160I",4
"lib2","SARS-CoV-2","AGCTGAAACGGAGAAA",14,71.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D68L L95P K114P",3
"lib2","SARS-CoV-2","AGCTGAAAGCCCCTTT",3,147.6,9.11,-1.72,0.07,2.34,1.06,0,">1 nonsynonymous","N1E Q176R",2
"lib2","SARS-CoV-2","AGCTGAAATCCCCATC",2,30.53,10.89,0.05,0.07,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTGAAGAACATCAA",5,104.13,10.66,-0.17,0.03,2.9,1.1,0,">1 nonsynonymous","R78C A192T",2
"lib2","SARS-CoV-2","AGCTGAATATATCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F S129F",2
"lib2","SARS-CoV-2","AGCTGAATCCAGGTAG",6,33.49,6.01,-4.83,0.9,3,1.2,0.01,">1 nonsynonymous","K94W P149I",2
"lib2","SARS-CoV-2","AGCTGAATGGGACGTC",4,71.34,9.02,-1.82,0.08,2.8,1.05,0,"1 nonsynonymous","G146C",1
"lib2","SARS-CoV-2","AGCTGACATGGGAATG",4,2.93,NA,NA,NA,NA,NA,NA,"stop","C49* L131V Y143N",3
"lib2","SARS-CoV-2","AGCTGACCATCGCAGT",10,53.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33P A42S T100F P161T F185A",5
"lib2","SARS-CoV-2","AGCTGACTACTAACAT",1,12.68,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","D90L N107S N118T Q144G P161N C195V",6
"lib2","SARS-CoV-2","AGCTGAGCACTGTGGC",3,33.25,9.96,-0.87,0.09,2.72,1,0,">1 nonsynonymous","N4T D34R D59S",3
"lib2","SARS-CoV-2","AGCTGAGCCATAAAAT",6,55.07,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","L60N A105P G146L G152L F160S",5
"lib2","SARS-CoV-2","AGCTGAGCTACTTATG",4,27.89,10.17,-0.66,0.06,2.87,1,0,">1 nonsynonymous","P96G G155S",2
"lib2","SARS-CoV-2","AGCTGATAAACATAAT",8,71.15,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T3K N30L K94D Y143A",4
"lib2","SARS-CoV-2","AGCTGATAAAGTTTAG",7,177.1,10.75,-0.09,0.03,2.94,1.08,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","AGCTGATAGACTGACA",1,5.36,6,-4.84,2,3,1.01,0,">1 nonsynonymous","A14T G51W C102L V181F T201E",5
"lib2","SARS-CoV-2","AGCTGATCACATAGAG",3,58.73,10.81,-0.03,0.06,2.91,1.11,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","AGCTGATCCAACCTCC",7,59.32,9.71,-1.13,0.05,2.48,1.04,0,">1 nonsynonymous","P7L F134M A145S",3
"lib2","SARS-CoV-2","AGCTGATGATCAATTT",2,39.12,10.76,-0.08,0.15,2.91,1,0.01,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","AGCTGCACATAATCAC",8,48.63,9.83,-1,0.09,2.65,1.04,0.01,"1 nonsynonymous","Y121W",1
"lib2","SARS-CoV-2","AGCTGCACATGACCTG",6,57.05,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14E I80V G117S G172C",4
"lib2","SARS-CoV-2","AGCTGCAGCAGCAAAA",4,103.56,9.17,-1.66,0.05,2.88,1.11,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","AGCTGCCGTATAAAAA",5,26.88,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13I S129V G146Q S200N",4
"lib2","SARS-CoV-2","AGCTGCGCCCTAAAGC",1,17.73,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R124E E154L",2
"lib2","SARS-CoV-2","AGCTGCGGTAAATGGA",3,22.15,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L95N E135M G196W",3
"lib2","SARS-CoV-2","AGCTGCGTAGATTAAC",3,32.17,10.75,-0.08,0.17,2.74,1.08,0.01,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","AGCTGCTAAAACCCAA",1,4.49,NA,NA,NA,NA,NA,NA,"stop","C6N A33Q S43* D59* V115L V153C",6
"lib2","SARS-CoV-2","AGCTGCTAACTTAATA",8,124.69,6.55,-4.28,0.21,1.5,1.13,0,">1 nonsynonymous","I2C G86C",2
"lib2","SARS-CoV-2","AGCTGCTAATAAGAAC",11,90.41,9.73,-1.1,0.06,2.52,1.09,0,">1 nonsynonymous","N58D N107R K114R",3
"lib2","SARS-CoV-2","AGCTGCTGAGCTGAGA",7,75.23,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3D V52Y G172R",3
"lib2","SARS-CoV-2","AGCTGCTGTCTAAAAT",2,1.07,NA,NA,NA,NA,NA,NA,"stop","Y121* Y175N K198G",3
"lib2","SARS-CoV-2","AGCTGGATTGCTACGG",6,66.76,10.85,0.01,0.04,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCTGGCAAATGTACG",9,108.52,10.89,0.05,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTGGCTACTAAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N157F T170*",2
"lib2","SARS-CoV-2","AGCTGGGAACACACGC",5,82.72,10.21,-0.62,0.08,2.8,1.04,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","AGCTGGGATTAAAACA",1,13.9,8.33,-2.5,0.12,2.56,1.16,0.01,">1 nonsynonymous","D90I F126Y",2
"lib2","SARS-CoV-2","AGCTGGTATAACAACT",2,32.12,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","I2L G9K T15S P96L V103H Y165T",6
"lib2","SARS-CoV-2","AGCTGGTCCGAGTCAA",5,138.82,10.33,-0.51,0.03,2.89,1.06,0,">1 nonsynonymous","S19P E141G",2
"lib2","SARS-CoV-2","AGCTGGTTATAGAAGC",5,59.56,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F62S D90I G146V",3
"lib2","SARS-CoV-2","AGCTGTAGTAAATACC",2,3.49,NA,NA,NA,NA,NA,NA,"stop","L60* G174I",2
"lib2","SARS-CoV-2","AGCTGTCAAGTCACAT",2,2.82,NA,NA,NA,NA,NA,NA,"stop","A33* F134T",2
"lib2","SARS-CoV-2","AGCTGTCAGAATATAC",4,37.4,8.53,-2.3,0.25,1.52,1.1,0.03,">1 nonsynonymous","C6W S41P T46S D97T F156L V173F",6
"lib2","SARS-CoV-2","AGCTGTCAGGGCATCG",6,31.92,10.51,-0.33,0.04,2.91,1.08,0,">1 nonsynonymous","P7S I142L",2
"lib2","SARS-CoV-2","AGCTGTCCACAAGATT",2,172.6,9.8,-1.04,0.05,2.88,1.04,0,">1 nonsynonymous","K128N P169D",2
"lib2","SARS-CoV-2","AGCTGTGAAAATAGTA",5,6.5,9.94,-0.89,0.14,2.43,1,0.01,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","AGCTGTGAGTAAGAGT",5,21.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S19K R27L C49G",3
"lib2","SARS-CoV-2","AGCTGTGATATATACA",3,40.85,10.82,-0.02,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTGTGTATATTTAC",6,13.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N1V L95T N107K S200L",4
"lib2","SARS-CoV-2","AGCTGTTAAACTTACG",1,28.5,10.84,0,0.19,2.68,1.12,0.01,">1 nonsynonymous","V65M P197L",2
"lib2","SARS-CoV-2","AGCTGTTATAAGTATC",3,53.47,10.41,-0.42,0.04,2.89,1.05,0,">1 nonsynonymous","A33I V37I F134D",3
"lib2","SARS-CoV-2","AGCTGTTCATCTGAAA",3,73.77,10.83,0,0.07,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCTGTTGGTAAGGTA",8,132.71,10.16,-0.67,0.03,2.87,1.02,0,">1 nonsynonymous","T15F T148D",2
"lib2","SARS-CoV-2","AGCTTAAAAAGACTCG",1,9.97,10.24,-0.6,0.1,2.7,1.24,0,">1 nonsynonymous","A42V Q84H T201N",3
"lib2","SARS-CoV-2","AGCTTAAACTAAGATT",9,153.18,8.4,-2.43,0.09,2.77,1.06,0,">1 nonsynonymous","L125K N151L",2
"lib2","SARS-CoV-2","AGCTTAAATACCTTCA",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K T46A L131N",3
"lib2","SARS-CoV-2","AGCTTAAATCCAGGTG",3,66.86,10.69,-0.14,0.06,2.91,1.07,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","AGCTTAAATTCAATGT",8,20.49,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V11R K87S V173S",3
"lib2","SARS-CoV-2","AGCTTAACACTTGACA",6,94.89,6,-4.84,2,3,1.11,0,">1 nonsynonymous","E10K S43Y G101F Y165S S184A",5
"lib2","SARS-CoV-2","AGCTTAACCAAATTTA",1,15.01,10.87,0.03,0.06,3,1,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","AGCTTAACCGGGTTCT",3,72.87,8.68,-2.16,0.09,2.81,1.06,0,">1 nonsynonymous","A42G N58S R136H Q168I",4
"lib2","SARS-CoV-2","AGCTTAACGCATAGAA",2,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K C31G S41L Y91L W106A R127S",6
"lib2","SARS-CoV-2","AGCTTAACTGTGTCCT",1,3.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49W",1
"lib2","SARS-CoV-2","AGCTTAACTTCTGTTT",2,17.11,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","I88S Y159L",2
"lib2","SARS-CoV-2","AGCTTACAACCAATAC",3,52.88,10.51,-0.32,0.06,2.89,1.04,0,">1 nonsynonymous","D34N S184G",2
"lib2","SARS-CoV-2","AGCTTACAAGAAAGCA",4,49.73,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L162P V180I",2
"lib2","SARS-CoV-2","AGCTTACACTGCCCTC",3,16.67,9.11,-1.73,0.19,1.76,1.03,0.01,">1 nonsynonymous","T3F E10G G51L S129V",4
"lib2","SARS-CoV-2","AGCTTACAGATTTAAA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L L95Y V103L P161Y L188P S200L",6
"lib2","SARS-CoV-2","AGCTTACATCAAGAGA",20,193.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D59T N107H N120I Y143K",4
"lib2","SARS-CoV-2","AGCTTACGGGGTAACG",6,28.85,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","N4I R16L L95H",3
"lib2","SARS-CoV-2","AGCTTACGGGTAAGTT",11,208.07,10.46,-0.38,0.03,2.94,1.04,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","AGCTTACTACACGGAT",4,41.2,10.69,-0.15,0.06,2.98,1.04,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","AGCTTACTAGAACAAA",3,41.11,10.35,-0.49,0.06,2.87,1.09,0,"1 nonsynonymous","L38Y",1
"lib2","SARS-CoV-2","AGCTTACTATCATTAA",3,1.62,NA,NA,NA,NA,NA,NA,"stop","T3F A42* Y91A",3
"lib2","SARS-CoV-2","AGCTTAGAATAAGATC",3,12,9.66,-1.18,0.13,1.83,1.15,0.01,">1 nonsynonymous","N58L P133T",2
"lib2","SARS-CoV-2","AGCTTAGACGTTCCCA",2,15.71,6.01,-4.83,0.6,3,1.13,0.01,">1 nonsynonymous","A42T N64Y R124P",3
"lib2","SARS-CoV-2","AGCTTAGATAAGGGAA",9,132.63,9.77,-1.07,0.08,2.4,1.03,0,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","AGCTTAGGAAAAGATT",10,202.86,10.86,0.02,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGCTTAGTACGGCCTG",1,40.44,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A105T S113L A145T",3
"lib2","SARS-CoV-2","AGCTTAGTTCAGCGCC",16,89.96,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","D34F G86A Y165W",3
"lib2","SARS-CoV-2","AGCTTATATGATAGCA",2,0.87,NA,NA,NA,NA,NA,NA,"stop","F12R S45* P54V D75S P96S W106L Y165E",7
"lib2","SARS-CoV-2","AGCTTATCAACTACAT",2,9.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N24S Y50P D90C",3
"lib2","SARS-CoV-2","AGCTTATTTTAGGAGA",4,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K S53P G86Y N92G T140G",5
"lib2","SARS-CoV-2","AGCTTCAAACAAATTT",5,108.63,8.58,-2.26,0.06,2.57,1.08,0,">1 nonsynonymous","S43N C61S N107V",3
"lib2","SARS-CoV-2","AGCTTCAAACTAATAC",7,23.85,6,-4.84,2,1.95,1.24,0.02,">1 nonsynonymous","A22T A42L L57M I88F",4
"lib2","SARS-CoV-2","AGCTTCAAAGGATCCT",4,7.05,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T15S F99R",2
"lib2","SARS-CoV-2","AGCTTCAACAGGGGAG",4,6.96,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","T55I Y93S D112V",3
"lib2","SARS-CoV-2","AGCTTCAATCTCGCAG",1,23.76,6,-4.84,2,3,1.25,0.03,"1 nonsynonymous","P177Y",1
"lib2","SARS-CoV-2","AGCTTCACAAAAACCT",7,96.43,10.74,-0.1,0.03,2.97,1.05,0,"1 nonsynonymous","S43C",1
"lib2","SARS-CoV-2","AGCTTCACCCGAGTAT",7,1031.77,9.8,-1.03,0.03,2.85,1.05,0,">1 nonsynonymous","R73A T100C N171I",3
"lib2","SARS-CoV-2","AGCTTCACCTAGGTAT",16,139.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F62E C150Y",2
"lib2","SARS-CoV-2","AGCTTCAGAGGGCAAT",9,79.2,10.76,-0.07,0.07,2.92,1.07,0,">1 nonsynonymous","F62L E141N",2
"lib2","SARS-CoV-2","AGCTTCAGATAATAAA",2,61.81,10.71,-0.13,0.05,2.92,1.12,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","AGCTTCATCCTGTACC",3,27.73,10.78,-0.06,0.04,3,1.03,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","AGCTTCCAGCAACGTA",9,105.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N157T Q168P",2
"lib2","SARS-CoV-2","AGCTTCCCTATCTCAA",7,6.79,NA,NA,NA,NA,NA,NA,"stop","N58* N107G F156Q",3
"lib2","SARS-CoV-2","AGCTTCCCTGCTACTA",1,20.9,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","C61N T85A A105S E135P P161L",5
"lib2","SARS-CoV-2","AGCTTCCGAGAAGTTT",6,153.65,10.75,-0.09,0.04,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGCTTCCTACTTATAC",1,15.01,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K87L P149V Y159R R179T",4
"lib2","SARS-CoV-2","AGCTTCGGTATACTAA",2,6.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K V103D",2
"lib2","SARS-CoV-2","AGCTTCGTCGACTCGC",1,22.37,10.85,0.01,0.23,2.48,1.1,0.03,"1 nonsynonymous","A190D",1
"lib2","SARS-CoV-2","AGCTTCGTCTTGAAGC",2,95.25,8.53,-2.31,0.08,2.28,1.07,0,">1 nonsynonymous","A81D Y119F",2
"lib2","SARS-CoV-2","AGCTTCTGTCGGCTTC",5,0.33,NA,NA,NA,NA,NA,NA,"stop","K48* C61S G83T V103G F126N C158V G166L",7
"lib2","SARS-CoV-2","AGCTTCTTTACAACTA",8,44.46,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","S19L G101D K114T L125S E141N Y175M",6
"lib2","SARS-CoV-2","AGCTTGACTAAACAAT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","D97L L122*",2
"lib2","SARS-CoV-2","AGCTTGATAGAGTTCA",10,5.78,NA,NA,NA,NA,NA,NA,"stop","F12H N92* S139L",3
"lib2","SARS-CoV-2","AGCTTGATATTTCATT",7,139.55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6V R25I P177M",3
"lib2","SARS-CoV-2","AGCTTGCGACTCGTAA",14,395.18,10.44,-0.39,0.03,2.93,1.06,0,">1 nonsynonymous","T55N A67I T148L",3
"lib2","SARS-CoV-2","AGCTTGGAAACACTAA",3,25.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94D C158N",2
"lib2","SARS-CoV-2","AGCTTGGAACACTAAA",15,90.49,8.88,-1.96,0.08,1.56,1.09,0,">1 nonsynonymous","F12D R27A",2
"lib2","SARS-CoV-2","AGCTTGGCATCCCGCG",4,26.9,10.74,-0.1,0.06,2.74,1.28,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","AGCTTGGCTGAGAGGA",3,40.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G83S D97N F99S S129M",4
"lib2","SARS-CoV-2","AGCTTGTAACAGCATT",12,139.04,10.09,-0.74,0.07,2.56,1,0,">1 nonsynonymous","S139N V180T T201G",3
"lib2","SARS-CoV-2","AGCTTGTAACCGCCGT",3,61.87,6.91,-3.93,0.21,1.85,1.14,0.01,">1 nonsynonymous","C61E Y123C N157L",3
"lib2","SARS-CoV-2","AGCTTGTATACATCCA",23,161.83,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y91R Y165A S200C",3
"lib2","SARS-CoV-2","AGCTTGTCAATGAACA",5,40.62,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K56W E76V D90V",3
"lib2","SARS-CoV-2","AGCTTTAAAAAAAAAG",10,91.74,10.15,-0.69,0.06,2.84,1.07,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","AGCTTTAAAACGACAA",14,100.11,9.64,-1.2,0.08,2.01,1.1,0,">1 nonsynonymous","K48W D97E G152A",3
"lib2","SARS-CoV-2","AGCTTTAACCGTAATT",5,55,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A33G P82S G117Q",3
"lib2","SARS-CoV-2","AGCTTTACTCATCCCA",1,8.44,10.35,-0.49,0.11,2.91,1,0.01,">1 nonsynonymous","L5V F12M D97E K198G",4
"lib2","SARS-CoV-2","AGCTTTAGAAACGAGG",1,17.44,9.44,-1.39,0.11,2.78,1.16,0.01,">1 nonsynonymous","A42V Y119S E141T L187T",4
"lib2","SARS-CoV-2","AGCTTTAGACCTTCTA",2,10.72,9.66,-1.17,0.16,2.91,1.08,0.01,">1 nonsynonymous","T3D A190V",2
"lib2","SARS-CoV-2","AGCTTTAGGCCTACTG",10,57.1,6.15,-4.69,0.61,1.5,1.12,0.01,">1 nonsynonymous","R124T T148V Q163S",3
"lib2","SARS-CoV-2","AGCTTTATCACGCGTA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","D34A N109I Q176*",3
"lib2","SARS-CoV-2","AGCTTTATTATTAACA",3,50.86,7.77,-3.06,0.18,1.5,1.19,0.01,">1 nonsynonymous","S29V Q84R S139V G155A",4
"lib2","SARS-CoV-2","AGCTTTCAAGGAATCA",9,106.08,6.06,-4.78,0.79,1.5,1.17,0.01,">1 nonsynonymous","F62T P96F",2
"lib2","SARS-CoV-2","AGCTTTCACGAACAAA",2,13.42,9.37,-1.46,0.15,2.5,1.09,0.01,">1 nonsynonymous","Y121V P149H",2
"lib2","SARS-CoV-2","AGCTTTGAATACTGAA",4,12.72,8.61,-2.22,0.24,1.5,1,0.02,">1 nonsynonymous","E76R K87N",2
"lib2","SARS-CoV-2","AGCTTTGACTCTAACA",11,132.71,9.67,-1.17,0.06,2.77,1.05,0,">1 nonsynonymous","T63C Y91W",2
"lib2","SARS-CoV-2","AGCTTTGATAAACACA",5,67.78,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N58Y Y91K A105Y",3
"lib2","SARS-CoV-2","AGCTTTGTCGTAATCG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","C61S A81I R136* A192T",4
"lib2","SARS-CoV-2","AGCTTTTAGAGTTACC",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A18E W23L P54S L131A S139T F156T T201Q",8
"lib2","SARS-CoV-2","AGCTTTTAGGGCAGAG",9,74.8,9.09,-1.74,0.07,1.73,1.1,0,">1 nonsynonymous","I2H S36G G86S",3
"lib2","SARS-CoV-2","AGCTTTTCCCACATTA",2,8.09,9.83,-1,0.19,2.66,1.22,0.01,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","AGCTTTTCTTACGAAC",5,39.85,10.21,-0.62,0.07,2.91,1.07,0,">1 nonsynonymous","K48Q L60P",2
"lib2","SARS-CoV-2","AGCTTTTTCAAGATAA",6,129.31,10.01,-0.82,0.05,2.59,1.02,0,">1 nonsynonymous","R27W V37A V173S",3
"lib2","SARS-CoV-2","AGCTTTTTCAATAACA",14,222.7,9.43,-1.4,0.05,2.78,1.06,0,">1 nonsynonymous","A105V F156L",2
"lib2","SARS-CoV-2","AGCTTTTTTAAAGGAA",15,482.22,10.7,-0.13,0.03,2.92,1.07,0,">1 nonsynonymous","S41Y D97K N110R",3
"lib2","SARS-CoV-2","AGGAAAAACCTGGGTC",1,35.71,10.92,0.08,0.05,2.98,1,0,"1 nonsynonymous","T85K",1
"lib2","SARS-CoV-2","AGGAAAAACGACGACT",5,167.13,10.19,-0.65,0.06,2.62,1.07,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","AGGAAAAACGCGATAT",9,3.76,NA,NA,NA,NA,NA,NA,"stop","T140* G166F",2
"lib2","SARS-CoV-2","AGGAAAAAGTAATAGT",8,24.21,8.87,-1.97,0.12,1.6,1.07,0.01,">1 nonsynonymous","P7S Q84L I88L",3
"lib2","SARS-CoV-2","AGGAAAAATCCCTTGA",10,139.2,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6R A89Q I138R",3
"lib2","SARS-CoV-2","AGGAAAACAAGAACAG",2,40.42,10.76,-0.08,0.04,2.89,1.14,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","AGGAAAACACTCTGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39H K56Y I72V P133*",4
"lib2","SARS-CoV-2","AGGAAAACGACTAAAG",8,61.57,10.84,0.01,0.04,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAAACGATCACAT",2,41.03,10.46,-0.38,0.04,2.95,1.06,0,">1 nonsynonymous","F17W K87M",2
"lib2","SARS-CoV-2","AGGAAAACGGCTTTGA",6,12.78,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Q79K I88S",2
"lib2","SARS-CoV-2","AGGAAAAGAATGCAGG",5,59.76,9.08,-1.76,0.18,1.5,1.06,0.02,">1 nonsynonymous","S45F V173S V194A",3
"lib2","SARS-CoV-2","AGGAAAAGACCGCCCG",2,20.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G83N T170I Y178L",3
"lib2","SARS-CoV-2","AGGAAAAGAGAACCAA",8,11.49,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S29G N130R D137G P149D E186I",5
"lib2","SARS-CoV-2","AGGAAAATACGGGCTT",3,29.71,8.83,-2,0.18,1.68,1.16,0.02,">1 nonsynonymous","Y21H P96K",2
"lib2","SARS-CoV-2","AGGAAAATATCAAGCC",1,6.83,6,-4.84,2,1.5,1.21,0.08,">1 nonsynonymous","L95R Y119D",2
"lib2","SARS-CoV-2","AGGAAAATTAAATGTT",2,35.99,10.71,-0.13,0.05,2.93,1.07,0,">1 nonsynonymous","A105S K114R",2
"lib2","SARS-CoV-2","AGGAAAATTGAATAAA",7,2.05,NA,NA,NA,NA,NA,NA,"stop","N1R V32* F160A F167V",4
"lib2","SARS-CoV-2","AGGAAACAATAAGTCC",11,178.82,10.82,-0.01,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGAAACACCCAATAT",9,75.45,10.88,0.04,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAACACCGCCTAA",2,30.33,7.64,-3.19,0.14,1.79,1.12,0.01,">1 nonsynonymous","S113P E141N",2
"lib2","SARS-CoV-2","AGGAAACAGGCGTTGT",4,23.98,6,-4.84,2,3,1.1,0,">1 nonsynonymous","E10K S19K L38N F99Y G146M",5
"lib2","SARS-CoV-2","AGGAAACATATTAACT",1,13.84,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","L5A V37A F44C N64G G83Y K94A D137S V173E",8
"lib2","SARS-CoV-2","AGGAAACATATTATTT",6,40.15,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","I72T L122W S129T G155D L162S",5
"lib2","SARS-CoV-2","AGGAAACATTATGAAT",2,9.84,10.95,0.11,0.07,2.97,1.06,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","AGGAAACATTTCTGCC",7,114.68,9.15,-1.68,0.05,2.88,1.12,0,">1 nonsynonymous","N58D G166I",2
"lib2","SARS-CoV-2","AGGAAACCAAGGGTCA",13,83.09,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6Q F44M N92L P161T",4
"lib2","SARS-CoV-2","AGGAAACCGATATAAA",9,70.99,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","N1I A105K",2
"lib2","SARS-CoV-2","AGGAAACGATTAGGAA",9,126.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V37I I72S V103M Y175F",4
"lib2","SARS-CoV-2","AGGAAACGCACTAGAG",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R S41P N64L S129T",4
"lib2","SARS-CoV-2","AGGAAACGCTGTCTAT",7,59.57,7.55,-3.29,0.27,1.5,1.13,0.03,">1 nonsynonymous","A81F G86N I142L L187R",4
"lib2","SARS-CoV-2","AGGAAACGCTTATTCT",10,227.11,7.21,-3.63,0.09,1.89,1.1,0,"1 nonsynonymous","C150P",1
"lib2","SARS-CoV-2","AGGAAACGGGCTCATC",2,28.8,9.68,-1.16,0.21,1.96,1.03,0.02,">1 nonsynonymous","Y39S S45R D90C",3
"lib2","SARS-CoV-2","AGGAAACGTCTAATTG",2,86.4,9.49,-1.35,0.05,2.81,1.13,0,"1 nonsynonymous","R73P",1
"lib2","SARS-CoV-2","AGGAAACTCACAATAG",9,169.56,10.59,-0.25,0.02,2.93,1.04,0,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","AGGAAACTCCAAGAGC",7,63.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I Q84L D112W",3
"lib2","SARS-CoV-2","AGGAAAGAACATTGAA",2,17.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4F E141W F167Y",3
"lib2","SARS-CoV-2","AGGAAAGAATGGCCGA",1,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F W106R P161T S200G",4
"lib2","SARS-CoV-2","AGGAAAGAGACCCACA",3,108.99,10.56,-0.27,0.02,2.96,1.05,0,">1 nonsynonymous","K87I P96N V153N Q168F",4
"lib2","SARS-CoV-2","AGGAAAGATGCTCTCA",9,118.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37N F62R D90S W106E P197S",5
"lib2","SARS-CoV-2","AGGAAAGCGAATTTGA",9,180.67,9.22,-1.62,0.06,2.45,1.06,0,">1 nonsynonymous","C61F D90S P169V",3
"lib2","SARS-CoV-2","AGGAAAGCGCCCGACG",6,39.83,6,-4.84,1.1,3,1.13,0.01,">1 nonsynonymous","T15S V71A N118F R124D P149H G196P",6
"lib2","SARS-CoV-2","AGGAAAGCTCAGTTAA",4,37.61,10.54,-0.29,0.07,2.85,1.14,0,">1 nonsynonymous","D98Y T201V",2
"lib2","SARS-CoV-2","AGGAAAGCTTAAGTTG",5,3.34,NA,NA,NA,NA,NA,NA,"stop","N58D T85Y T170* P177V K198G",5
"lib2","SARS-CoV-2","AGGAAAGGAACTAAGG",1,22.97,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","V77P N107I Y121S R127L Y159A S184D",6
"lib2","SARS-CoV-2","AGGAAAGGGAGTGACA",7,118.82,10.87,0.03,0.06,2.94,1.08,0,">1 nonsynonymous","R27C L122M",2
"lib2","SARS-CoV-2","AGGAAAGGTCCAATTA",1,36.07,10.48,-0.36,0.03,2.87,1.14,0,">1 nonsynonymous","F44L Q168R",2
"lib2","SARS-CoV-2","AGGAAAGTGCATAGAG",12,18.9,6.2,-4.64,1.49,1.5,1.14,0.06,">1 nonsynonymous","G74W G83W",2
"lib2","SARS-CoV-2","AGGAAATAATGTGAAA",1,19.01,9.31,-1.52,0.06,3,1.04,0,">1 nonsynonymous","T55R Y119I",2
"lib2","SARS-CoV-2","AGGAAATAATTTGGCC",6,11.07,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6P D59L A81D",3
"lib2","SARS-CoV-2","AGGAAATACCAAAAAC",5,28.54,9.43,-1.41,0.09,1.95,1.05,0.01,">1 nonsynonymous","I2P R16F D34F G116A V173Q",5
"lib2","SARS-CoV-2","AGGAAATACTCAATTT",5,114.98,9.35,-1.49,0.08,1.94,1.08,0,">1 nonsynonymous","N30Q T46N Q144P V173D",4
"lib2","SARS-CoV-2","AGGAAATCATAAATGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L G9F A42C R73F S139R V182C",6
"lib2","SARS-CoV-2","AGGAAATCGCGTATAT",4,1.11,NA,NA,NA,NA,NA,NA,"stop","N24V F99P W106* Y119L Q176L",5
"lib2","SARS-CoV-2","AGGAAATGAGGAAACC",2,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Q K87T P96L S129V",4
"lib2","SARS-CoV-2","AGGAAATGCTAACTCG",5,36.67,9.95,-0.89,0.09,2.2,1,0,">1 nonsynonymous","N1R Y35K T55N Q84V Q163L",5
"lib2","SARS-CoV-2","AGGAAATTAGGTCGAG",2,42.82,10.89,0.05,0.08,2.91,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAATTATGCAGAG",5,87.17,10.79,-0.04,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAATTCCAAGTGA",13,61.48,6,-4.84,1.5,1.5,1.16,0.02,">1 nonsynonymous","N4S V11A W23E P96T C150R",5
"lib2","SARS-CoV-2","AGGAAATTTAAACATG",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57P G83L",2
"lib2","SARS-CoV-2","AGGAACAAAACAGTGA",4,23.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36Y S45I T85V N120V",4
"lib2","SARS-CoV-2","AGGAACAAAATTACCG",5,78.6,10.7,-0.13,0.07,2.8,1.12,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","AGGAACAAGCCTAATA",6,81.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K87D Y123A G146R N151I",4
"lib2","SARS-CoV-2","AGGAACAATGTAGAAC",9,41.34,6.21,-4.63,0.55,3,1.26,0.01,">1 nonsynonymous","D34S S139M Q176S",3
"lib2","SARS-CoV-2","AGGAACACAAGTACGT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","Y21* P82N Y121D R127K",4
"lib2","SARS-CoV-2","AGGAACACACACAAAA",2,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R L95R F134S",3
"lib2","SARS-CoV-2","AGGAACACTCGTCCAC",3,149.21,9.92,-0.92,0.07,2.5,1.04,0,">1 nonsynonymous","A14T T63L Q144A",3
"lib2","SARS-CoV-2","AGGAACACTGATTGCA",2,73.82,10.84,0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAACCAAGGGTGAA",2,32.95,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C6Q S41R Y119L Y175R P197N",5
"lib2","SARS-CoV-2","AGGAACCACAAGCGGA",3,18.91,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61R D112G",2
"lib2","SARS-CoV-2","AGGAACCACAGGAAAA",5,6.34,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G83K I88V D98Y I104E D112Y",5
"lib2","SARS-CoV-2","AGGAACCATAAAAACT",3,28.48,8.05,-2.78,0.13,2.44,1,0.01,">1 nonsynonymous","A14K N157F K199L",3
"lib2","SARS-CoV-2","AGGAACCCAAAAGATT",1,81.09,10.88,0.05,0.03,2.98,1.04,0,"1 nonsynonymous","F62A",1
"lib2","SARS-CoV-2","AGGAACCCGAAAACCA",6,57.07,10.49,-0.35,0.03,2.95,1.05,0,">1 nonsynonymous","P7S G174S",2
"lib2","SARS-CoV-2","AGGAACCCTGAAAATT",4,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S K56V S69N E141A",4
"lib2","SARS-CoV-2","AGGAACCGATAGAGAT",3,34.25,10.67,-0.16,0.06,2.9,1.1,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","AGGAACCGCGAATCAA",6,73.39,10.92,0.08,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAACCTCTAATCCC",1,85.54,9.95,-0.89,0.05,2.8,1.08,0,">1 nonsynonymous","L60Q V173P",2
"lib2","SARS-CoV-2","AGGAACCTCTTAGTTT",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S P96L C102M K128Q L183K",5
"lib2","SARS-CoV-2","AGGAACGAAAAAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40W S45M S53L F62K W106I L122* G152N V180S",8
"lib2","SARS-CoV-2","AGGAACGCGAAGCACG",7,50.85,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F99S G166W",2
"lib2","SARS-CoV-2","AGGAACGCGTTGTTTC",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24G S129W P149S",3
"lib2","SARS-CoV-2","AGGAACGTATCATTCC",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Y L95T G117L",3
"lib2","SARS-CoV-2","AGGAACGTTTGACATG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34A A42*",2
"lib2","SARS-CoV-2","AGGAACTATTAGTAAC",7,171.72,9.24,-1.6,0.05,2.87,1.07,0,"1 nonsynonymous","G117L",1
"lib2","SARS-CoV-2","AGGAACTCCACAAACC",4,75.42,10.23,-0.6,0.05,2.8,1.08,0,">1 nonsynonymous","I2R L57F P149R K199N",4
"lib2","SARS-CoV-2","AGGAACTGAATGAGAT",1,15.05,9.49,-1.34,0.19,2.58,1.05,0.01,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","AGGAACTGACTGCAAG",2,0.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGGAACTGTTTAAAGA",5,93.94,10.85,0.01,0.08,2.94,1.08,0,">1 nonsynonymous","Y39V T140S",2
"lib2","SARS-CoV-2","AGGAACTTAACAGATA",16,2245.19,6,-4.84,1.55,1.5,1.2,0.02,">1 nonsynonymous","A42G F70H Y143R G155F",4
"lib2","SARS-CoV-2","AGGAACTTAATTCAAC",6,47.9,10.79,-0.05,0.04,3,1.03,0,"1 nonsynonymous","V153N",1
"lib2","SARS-CoV-2","AGGAACTTCAACCACC",3,67.48,10.1,-0.74,0.07,2.9,1.12,0,">1 nonsynonymous","K87V I142F",2
"lib2","SARS-CoV-2","AGGAAGAAAAAGATGC",8,48.12,10.11,-0.73,0.09,2.64,1.02,0,">1 nonsynonymous","P133M Q168A",2
"lib2","SARS-CoV-2","AGGAAGAAAGCTTTGG",25,349.86,10.85,0.01,0.05,2.94,1.06,0,">1 nonsynonymous","L122R S147V",2
"lib2","SARS-CoV-2","AGGAAGAAGAACATTC",3,55.3,9.93,-0.91,0.08,2.6,1,0,">1 nonsynonymous","N107S P149T",2
"lib2","SARS-CoV-2","AGGAAGAGGAATGGTT",20,6.68,NA,NA,NA,NA,NA,NA,"stop","F44D Y91A R127*",3
"lib2","SARS-CoV-2","AGGAAGATAGAGAATT",6,75.44,10.9,0.07,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAGATATAGAGAA",2,27.55,8.93,-1.91,0.2,1.5,1,0.03,">1 nonsynonymous","A105F K132W",2
"lib2","SARS-CoV-2","AGGAAGATATAGGACA",2,34.39,10.84,0.01,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAGATATCAAAAA",4,38.13,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","A14D K132L T140K P161F",4
"lib2","SARS-CoV-2","AGGAAGATCATAAAAT",2,42.81,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25V Y39R L60T K94G F156S",5
"lib2","SARS-CoV-2","AGGAAGATCTTTACCT",8,112.9,10.82,-0.02,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAGCAGACACTAT",9,114.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2D N92Y I104F Q144Y Y175G L188Y",6
"lib2","SARS-CoV-2","AGGAAGCAGCATCCAA",2,56.28,10.49,-0.35,0.05,2.84,1.1,0,">1 nonsynonymous","T15S F47M",2
"lib2","SARS-CoV-2","AGGAAGCGATGGAATG",2,14.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A81Y R127L",2
"lib2","SARS-CoV-2","AGGAAGCTGGTAATGA",2,0.81,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","AGGAAGGAAGATGGCT",9,123.2,10.83,0,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAAGGATAGAGAAA",2,34.66,10.02,-0.82,0.1,2.59,1.08,0.01,">1 nonsynonymous","N120G V173S T201N",3
"lib2","SARS-CoV-2","AGGAAGGGGGTGCCCT",3,32.65,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","R27V Y35Q Y91D",3
"lib2","SARS-CoV-2","AGGAAGGTCATGAAGC",7,54.35,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T63Y G86F T148L",3
"lib2","SARS-CoV-2","AGGAAGTAAACAACCT",8,38.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P82A W106K G146K P197R",4
"lib2","SARS-CoV-2","AGGAAGTAAACGCAAA",12,330.7,10.11,-0.73,0.03,2.85,1.03,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","AGGAAGTACAGACAGA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","D59A D68* R127Y Q163R Y175M",5
"lib2","SARS-CoV-2","AGGAAGTATTAGTTAT",3,48.04,10.78,-0.06,0.06,2.88,1.1,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","AGGAAGTCAACATTAA",11,2.54,NA,NA,NA,NA,NA,NA,"stop","I2D F62* P82L N120S P133T",5
"lib2","SARS-CoV-2","AGGAAGTCCCCTACGG",3,51.78,10.64,-0.2,0.05,2.99,1,0,">1 nonsynonymous","S43M V77M K199R",3
"lib2","SARS-CoV-2","AGGAAGTTCATATTAT",9,178.64,10.79,-0.04,0.03,2.95,1.05,0,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","AGGAAGTTGGAAAGCC",4,57.18,10.84,0,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAATAAAACTCCCA",8,124.19,8.14,-2.69,0.29,1.5,1.04,0.04,">1 nonsynonymous","G9V K48I Y91V N130M",4
"lib2","SARS-CoV-2","AGGAATAAAATTGACC",1,8.78,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y119R G146M S164G",3
"lib2","SARS-CoV-2","AGGAATAACACAGGGT",3,29.43,10.92,0.08,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAATAATCTTCGAC",3,13.57,10.67,-0.17,0.04,3,1,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","AGGAATAATGATAGCA",3,20.48,9.46,-1.38,0.11,2.77,1.06,0,">1 nonsynonymous","Y66T Y119Q",2
"lib2","SARS-CoV-2","AGGAATAATTTGTAAG",6,115.83,9.7,-1.14,0.05,2.09,1.03,0,">1 nonsynonymous","G9H F70Y V153I",3
"lib2","SARS-CoV-2","AGGAATACAGCACTTC",3,16.32,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9D D90Q P96Q F99T K198N",5
"lib2","SARS-CoV-2","AGGAATACGCGGTTAT",2,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F V77R C102Q Y119D",4
"lib2","SARS-CoV-2","AGGAATACTATAGGTA",8,37.4,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16P S43G D68L D90E R124K",5
"lib2","SARS-CoV-2","AGGAATACTATGGTCC",6,227.5,10.73,-0.11,0.04,2.98,1.03,0,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","AGGAATAGTCGCTGAT",8,24.95,8.25,-2.59,0.21,1.71,1.13,0.02,">1 nonsynonymous","A42L C61N Y91T P149S",4
"lib2","SARS-CoV-2","AGGAATATCTTATGGA",2,41.86,10.8,-0.03,0.05,2.95,1.08,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","AGGAATATGTAAAGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G S69M L95F W106M R127W",5
"lib2","SARS-CoV-2","AGGAATATTACTGAGA",7,106.13,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N30A Y50Q G86R T140S",4
"lib2","SARS-CoV-2","AGGAATATTCAGGAAC",3,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S V103T",2
"lib2","SARS-CoV-2","AGGAATCAAAAAGTGG",5,57.82,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A14N S29L A42G V52A I80L G117Q",6
"lib2","SARS-CoV-2","AGGAATCAAGCCACGA",5,51.17,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V71H G83N Y121R T201S",4
"lib2","SARS-CoV-2","AGGAATCAATCAAAAG",1,0.49,NA,NA,NA,NA,NA,NA,"stop","S69* W106S K198L",3
"lib2","SARS-CoV-2","AGGAATCAGTGGACAC",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107T P191F",2
"lib2","SARS-CoV-2","AGGAATCATTGTCGTT",4,27.8,10.56,-0.28,0.11,2.91,1.11,0,">1 nonsynonymous","G116S S164Q",2
"lib2","SARS-CoV-2","AGGAATCCAACTATTT",2,24.8,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6H G86Y S129C",3
"lib2","SARS-CoV-2","AGGAATCCCCTTATTT",10,85.66,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","Y91L S113G E141C N157I",4
"lib2","SARS-CoV-2","AGGAATCTAGATTCCT",2,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P L38M F99S G116W G146V",5
"lib2","SARS-CoV-2","AGGAATCTCTTACATT",2,2.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","AGGAATGAATACATCA",2,43.38,8.86,-1.98,0.1,2.43,1.04,0,">1 nonsynonymous","G83L N118I",2
"lib2","SARS-CoV-2","AGGAATGACCAACAAC",18,77.38,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y50H Y143R N157E T201P",4
"lib2","SARS-CoV-2","AGGAATGACGAGTGCT",13,237.16,9.59,-1.24,0.06,2.51,1.05,0,">1 nonsynonymous","A42P E154I E186I",3
"lib2","SARS-CoV-2","AGGAATGAGGGTAAAT",8,1.41,NA,NA,NA,NA,NA,NA,"stop","Y50* D59V Y121D",3
"lib2","SARS-CoV-2","AGGAATGCATCACCTT",1,7.58,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A33G S45R P82L L162D",4
"lib2","SARS-CoV-2","AGGAATGCTTCGTCAC",8,45.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R W23S N64T G83N L95P",5
"lib2","SARS-CoV-2","AGGAATGGATGGGACG",6,29.1,8.67,-2.17,0.19,1.5,1,0.02,">1 nonsynonymous","Y50N N130M Q168R",3
"lib2","SARS-CoV-2","AGGAATGGTCTGTACT",16,245.2,8.78,-2.05,0.2,1.5,1,0.02,">1 nonsynonymous","I28L R124V",2
"lib2","SARS-CoV-2","AGGAATTAAAATTACG",3,11.69,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A81Y R127L",2
"lib2","SARS-CoV-2","AGGAATTAACAACGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H P54C",2
"lib2","SARS-CoV-2","AGGAATTACCGATGGA",2,4.33,NA,NA,NA,NA,NA,NA,"stop","P82Q E186*",2
"lib2","SARS-CoV-2","AGGAATTGACTCCCGC",1,10.37,10.35,-0.49,0.18,2.79,1.22,0.01,">1 nonsynonymous","I2R S41R Q144K",3
"lib2","SARS-CoV-2","AGGAATTGTCAATTAA",7,29.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15F F44L V77M G83D P161I",5
"lib2","SARS-CoV-2","AGGAATTTAAAATACC",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V52R",1
"lib2","SARS-CoV-2","AGGAATTTAAATCAGC",7,83.62,10.61,-0.22,0.04,3,1,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","AGGAATTTATAAAATT",3,33.97,7.94,-2.89,0.41,1.5,1,0.06,">1 nonsynonymous","C49I N120P",2
"lib2","SARS-CoV-2","AGGACAAATAAATTAA",4,0.58,NA,NA,NA,NA,NA,NA,"stop","D68H A81G W106* L188P",4
"lib2","SARS-CoV-2","AGGACAAATTATTAAA",6,79.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N92V F99I Q176I",3
"lib2","SARS-CoV-2","AGGACAAATTCGGTAT",1,14.26,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T15D V20L P149C L188V",4
"lib2","SARS-CoV-2","AGGACAACAAATTCAC",5,30.9,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V11D R124C",2
"lib2","SARS-CoV-2","AGGACAACCAAAAGAA",5,3.68,NA,NA,NA,NA,NA,NA,"stop","N30* V77Q G116I V181A",4
"lib2","SARS-CoV-2","AGGACAAGAAAACAGG",4,140.94,10.85,0.01,0.04,2.96,1.04,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","AGGACAAGCTTTAGGT",6,2.04,NA,NA,NA,NA,NA,NA,"stop","C6M I72* P82L I88N L95F",5
"lib2","SARS-CoV-2","AGGACAAGTACATAAT",21,6.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68A W106K",2
"lib2","SARS-CoV-2","AGGACAATCACACCCT",6,39.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T T85L D97N S200T",4
"lib2","SARS-CoV-2","AGGACAATTGAAGGAA",2,16.58,6,-4.84,2,1.5,1.11,0.03,"1 nonsynonymous","D68K",1
"lib2","SARS-CoV-2","AGGACAATTTCGAATA",4,45.1,6,-4.84,1.03,1.5,1.1,0,">1 nonsynonymous","N64P G86M G152Y",3
"lib2","SARS-CoV-2","AGGACACAAGCTAATC",8,136.15,10.68,-0.15,0.03,2.93,1.1,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","AGGACACCCTAAGTGG",3,44.62,8.69,-2.15,0.14,2.8,1.07,0.01,">1 nonsynonymous","I2V G9T P96S Y119S",4
"lib2","SARS-CoV-2","AGGACACCCTATGGAG",3,29.89,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S43G G51H Y93S",3
"lib2","SARS-CoV-2","AGGACACCGGAAAAGG",1,33.01,10.66,-0.17,0.05,2.99,1.07,0,"1 nonsynonymous","L57M",1
"lib2","SARS-CoV-2","AGGACACTGATATTAA",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y S41P N110A",3
"lib2","SARS-CoV-2","AGGACAGATACCAAAC",2,9.83,9.86,-0.98,0.11,3,1.03,0.01,">1 nonsynonymous","G83N L122C F156K",3
"lib2","SARS-CoV-2","AGGACAGCAGATATTA",3,88.39,8.13,-2.7,0.17,2.39,1.08,0.01,">1 nonsynonymous","T15Q K56C S113C F156P",4
"lib2","SARS-CoV-2","AGGACAGGACGATGCG",1,56.3,9.78,-1.06,0.08,2.04,1.06,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","AGGACAGGGTGAAGTT",8,227.81,10.6,-0.24,0.03,2.97,1.02,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","AGGACAGTAAACATTA",7,72.62,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6M P133K Q176M",3
"lib2","SARS-CoV-2","AGGACAGTAAGATATC",10,60.28,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T15V Y35A V103H Y121M",4
"lib2","SARS-CoV-2","AGGACAGTATTTTAAA",2,12.63,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","V11K S41L C158I",3
"lib2","SARS-CoV-2","AGGACAGTCGATCCAT",1,28.37,10.73,-0.1,0.09,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGACAGTGCACTCCT",10,45.58,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","E10W I28R S129G V181R",4
"lib2","SARS-CoV-2","AGGACATAAGTTAAAA",1,34.26,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","A81I Y175E",2
"lib2","SARS-CoV-2","AGGACATAAGTTGCGA",3,29.98,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C61L L95C N120F Y159F G166R",5
"lib2","SARS-CoV-2","AGGACATACCTTTATG",4,1.99,NA,NA,NA,NA,NA,NA,"stop","F70*",1
"lib2","SARS-CoV-2","AGGACATAGGTCGATA",3,75.55,11,0.16,0.09,2.84,1.03,0,">1 nonsynonymous","R27K Y39W",2
"lib2","SARS-CoV-2","AGGACATAGTAGTAGT",7,102.71,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N107Y S139E E154R T170L V173A",5
"lib2","SARS-CoV-2","AGGACATGTAAGGACT",2,24.58,10.75,-0.09,0.04,2.98,1.02,0,">1 nonsynonymous","S41N V115R",2
"lib2","SARS-CoV-2","AGGACCAAACAAGCCC",3,29.62,7.95,-2.89,0.34,1.5,1.2,0.04,">1 nonsynonymous","W106V Y143I",2
"lib2","SARS-CoV-2","AGGACCAAACTAACTA",4,34.01,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N40V T63Q I72C D98L K128R T170L Y178S",7
"lib2","SARS-CoV-2","AGGACCACAGAATAAG",4,48.47,10.77,-0.06,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGACCACCAAATGTG",10,132.05,10.19,-0.64,0.05,2.74,1.12,0,">1 nonsynonymous","T3L Y123Q",2
"lib2","SARS-CoV-2","AGGACCAGAGACCAGC",8,148.64,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2S I28R R127L",3
"lib2","SARS-CoV-2","AGGACCATTATTGGAT",3,0.86,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","AGGACCATTCGCCACG",3,15.08,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I88K T100C P197R",3
"lib2","SARS-CoV-2","AGGACCCAAATCTAAA",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V Q144M G155P",3
"lib2","SARS-CoV-2","AGGACCCAACTATGCC",2,29.82,9.37,-1.46,0.13,1.69,1.04,0.01,">1 nonsynonymous","V32G V77R",2
"lib2","SARS-CoV-2","AGGACCCACCAGGCAG",4,114.8,8.69,-2.14,0.08,2.87,1.1,0,">1 nonsynonymous","S41R Q168L V173F",3
"lib2","SARS-CoV-2","AGGACCCCGAAATGAC",15,227.86,6.26,-4.58,0.22,1.5,1.13,0,">1 nonsynonymous","G9S N120R C150F",3
"lib2","SARS-CoV-2","AGGACCCCTGGACTCT",1,27.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G116D S139Q Q176P",3
"lib2","SARS-CoV-2","AGGACCCGACAAAAAA",11,185.2,9.88,-0.96,0.05,2.21,1.03,0,"1 nonsynonymous","Y50T",1
"lib2","SARS-CoV-2","AGGACCCGAGAGTAAC",5,58.59,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S19V G51T G174V",3
"lib2","SARS-CoV-2","AGGACCCTATCTGGAC",6,36.39,9.31,-1.53,0.08,1.9,1.02,0,">1 nonsynonymous","D137Y Y178H",2
"lib2","SARS-CoV-2","AGGACCGAAAAATAAA",3,27.93,10.25,-0.58,0.05,2.9,1.05,0,">1 nonsynonymous","T63H F156L",2
"lib2","SARS-CoV-2","AGGACCGAACAGCTCT",1,4.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","AGGACCGATTCTTAAA",7,45.49,8.29,-2.54,0.19,1.52,1.12,0.01,">1 nonsynonymous","N120F D137S",2
"lib2","SARS-CoV-2","AGGACCGCTGCGACAT",6,59.06,6,-4.84,0.89,1.5,1.1,0.01,">1 nonsynonymous","F12K T63Q Q84Y D90T I142S V173Q",6
"lib2","SARS-CoV-2","AGGACCGGGCCCGTGC",7,0,NA,NA,NA,NA,NA,NA,"stop","L5Q N13F A42* G86C G174R",5
"lib2","SARS-CoV-2","AGGACCTAAACACCTT",3,48.08,8.81,-2.02,0.13,1.5,1.19,0.01,">1 nonsynonymous","L5V G9Q A22G Q79T",4
"lib2","SARS-CoV-2","AGGACCTGACCAAAAA",13,127.99,10.07,-0.76,0.07,2.61,1.06,0,"1 nonsynonymous","D112I",1
"lib2","SARS-CoV-2","AGGACCTGATGTACAT",4,7.16,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","A14S Y50D V77M K87W N120L S139I",6
"lib2","SARS-CoV-2","AGGACCTTTTGGGGAG",8,40.97,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A14I K26V N107M R124Q P197G",5
"lib2","SARS-CoV-2","AGGACGAAAGGTTAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","F44S N64* I104K G117K G146R S164G",6
"lib2","SARS-CoV-2","AGGACGAAATAAGGAG",1,9.81,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","Y35G N151T L183T",3
"lib2","SARS-CoV-2","AGGACGAAGGAGTGTT",4,41.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9L D34N D68E S108P R124K",5
"lib2","SARS-CoV-2","AGGACGACGAACTTTG",5,67.24,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38S F62G D68R A89E",4
"lib2","SARS-CoV-2","AGGACGAGTTAATCAC",8,1.71,NA,NA,NA,NA,NA,NA,"stop","L95Q S129* L162F",3
"lib2","SARS-CoV-2","AGGACGATAGATAAGT",5,13.47,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6M D112R",2
"lib2","SARS-CoV-2","AGGACGATATCATAAC",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q S36P F44C K94E G117V E141K V153E L183T",8
"lib2","SARS-CoV-2","AGGACGCCCCACCTAA",5,20.61,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S41L D137R V153D",3
"lib2","SARS-CoV-2","AGGACGGATATACACA",15,250.21,10.28,-0.55,0.03,2.96,1.05,0,"1 nonsynonymous","P169M",1
"lib2","SARS-CoV-2","AGGACGGATATATCAG",1,23.04,10.45,-0.39,0.13,2.65,1.05,0.01,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","AGGACGGCCAAAACAA",7,105.86,9.33,-1.5,0.03,2.91,1.07,0,">1 nonsynonymous","T15S K87T A105W P169S",4
"lib2","SARS-CoV-2","AGGACGTATACATACC",4,29.43,10.84,0.01,0.04,3,1.01,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","AGGACGTCATTATAAA",4,53.61,10.54,-0.29,0.06,2.88,1.11,0,"1 nonsynonymous","S139C",1
"lib2","SARS-CoV-2","AGGACTAAAAATTAAA",7,29.36,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","C6A V37M S53T G152Y L183E L188E",6
"lib2","SARS-CoV-2","AGGACTACGAAAGATC",8,91.16,10.34,-0.5,0.04,2.89,1.05,0,">1 nonsynonymous","A42F S53Y K114S K198L",4
"lib2","SARS-CoV-2","AGGACTAGAACTTAGT",3,51.05,10.67,-0.16,0.05,2.84,1.11,0,">1 nonsynonymous","A81Q N120A",2
"lib2","SARS-CoV-2","AGGACTAGGATAGAGT",5,9.85,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C102K Y119L G146T N151K",4
"lib2","SARS-CoV-2","AGGACTAGTTAATAGC",2,29.38,10.44,-0.4,0.06,2.88,1.12,0,">1 nonsynonymous","E10L K87H L122Y",3
"lib2","SARS-CoV-2","AGGACTATGAAAAAGT",5,58.84,9.8,-1.04,0.11,1.91,1.11,0,">1 nonsynonymous","W106T E141V",2
"lib2","SARS-CoV-2","AGGACTATTTTATGAA",3,90.77,8.15,-2.69,0.13,2.07,1.14,0.01,">1 nonsynonymous","S113Q K128A F156L",3
"lib2","SARS-CoV-2","AGGACTCCACCCTGGG",5,69.45,8.89,-1.95,0.18,1.64,1.08,0.01,">1 nonsynonymous","C6G F99Y T148V",3
"lib2","SARS-CoV-2","AGGACTCCATAATTTG",33,492.59,9.6,-1.24,0.02,2.92,1.08,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","AGGACTCTTATATTAG",1,2.63,NA,NA,NA,NA,NA,NA,"stop","L60* P191L",2
"lib2","SARS-CoV-2","AGGACTGACGACCTGA",7,45.67,10.19,-0.64,0.04,2.96,1.04,0,">1 nonsynonymous","S36N E154V",2
"lib2","SARS-CoV-2","AGGACTGATAAAATAA",7,42.78,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","D34Q S45L F99Y P161L",4
"lib2","SARS-CoV-2","AGGACTGTGAATTTAG",2,14.92,8.41,-2.43,0.16,1.81,1.12,0.01,">1 nonsynonymous","C6N A89V L187V T201Y",4
"lib2","SARS-CoV-2","AGGACTTAAAAGTGTC",6,1.04,NA,NA,NA,NA,NA,NA,"stop","I142L G174R S184*",3
"lib2","SARS-CoV-2","AGGACTTAACCAGTTT",4,73.08,10.22,-0.61,0.06,2.79,1.06,0,">1 nonsynonymous","A42S N107P",2
"lib2","SARS-CoV-2","AGGACTTAATTAAAAC",12,182.53,10.12,-0.72,0.04,2.65,1.09,0,">1 nonsynonymous","T63P N120F T201K",3
"lib2","SARS-CoV-2","AGGACTTATGTCGAAC",4,81.27,10.79,-0.05,0.05,2.89,1.13,0,"1 nonsynonymous","N130F",1
"lib2","SARS-CoV-2","AGGACTTCAACAATGG",3,48.26,10.75,-0.08,0.05,3,1,0,"1 nonsynonymous","V180C",1
"lib2","SARS-CoV-2","AGGACTTGAACTAAAT",5,1.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","AGGACTTTATAGAAAT",6,54.65,9.61,-1.22,0.06,1.92,1.04,0,">1 nonsynonymous","G51F T100L",2
"lib2","SARS-CoV-2","AGGACTTTCGACATGG",11,8.79,NA,NA,NA,NA,NA,NA,"stop","C102R D112G N120P P197*",4
"lib2","SARS-CoV-2","AGGACTTTGATAGAAA",5,41.89,6.44,-4.4,0.46,1.5,1.08,0.02,">1 nonsynonymous","S45Y Y143N G166D",3
"lib2","SARS-CoV-2","AGGACTTTGCGCTACG",11,4.26,NA,NA,NA,NA,NA,NA,"stop","N58* P82L P197S",3
"lib2","SARS-CoV-2","AGGAGAAAAATTGCAT",4,118.55,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C61Y N157L Y165G Q176E",4
"lib2","SARS-CoV-2","AGGAGAAACCCATAAA",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D C61V A145L C158M",4
"lib2","SARS-CoV-2","AGGAGAAACGGACCTG",10,1.96,NA,NA,NA,NA,NA,NA,"stop","Y91T N107D L122H C158*",4
"lib2","SARS-CoV-2","AGGAGAAACTAATAGT",5,38.61,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","Y21Q Y39K N107P N157L",4
"lib2","SARS-CoV-2","AGGAGAAAGATCAATA",4,10.52,NA,NA,NA,NA,NA,NA,"stop","R25* V32A L95Y",3
"lib2","SARS-CoV-2","AGGAGAACAAGACCAT",3,15.99,6.05,-4.79,0.77,1.5,1.07,0.01,">1 nonsynonymous","P7A R127H T148M L162H",4
"lib2","SARS-CoV-2","AGGAGAAGATACAAAC",2,173.64,9.78,-1.06,0.03,2.81,1.04,0,">1 nonsynonymous","C6M E154P S200I",3
"lib2","SARS-CoV-2","AGGAGAAGGACCTTAT",1,14.15,10.7,-0.14,0.06,2.98,1,0,">1 nonsynonymous","S53L I104M",2
"lib2","SARS-CoV-2","AGGAGAAGTTCGATAA",10,67.27,10.77,-0.07,0.07,2.99,1.04,0,"1 nonsynonymous","S139A",1
"lib2","SARS-CoV-2","AGGAGAATAACATATA",6,46.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C49N D90I G116K G172E",4
"lib2","SARS-CoV-2","AGGAGAATTATATAAA",10,103.69,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90Y N157W",2
"lib2","SARS-CoV-2","AGGAGAATTTTCTTGC",11,76.03,7.5,-3.33,0.21,1.5,1.1,0.01,">1 nonsynonymous","S41V K48D Y123S Q144K N151A",5
"lib2","SARS-CoV-2","AGGAGACAGTATATAC",3,25.61,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","A81C A89R V103L Y119T",4
"lib2","SARS-CoV-2","AGGAGACGACCCTAAC",7,98.11,9.86,-0.98,0.11,2.09,1.12,0.01,">1 nonsynonymous","L38Q C61V",2
"lib2","SARS-CoV-2","AGGAGAGATACACTTG",10,35.93,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F17A V115N Y165L",3
"lib2","SARS-CoV-2","AGGAGAGCCTCAGGGA",2,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S N157K T201Q",3
"lib2","SARS-CoV-2","AGGAGAGTATATAAAG",6,9.66,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I104K V181L",2
"lib2","SARS-CoV-2","AGGAGATACCCAAATC",6,15.95,NA,NA,NA,NA,NA,NA,"stop","D34Y Q84* V103N K132V C195F",5
"lib2","SARS-CoV-2","AGGAGATATAGTAAAT",7,114.83,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N40S V77H K94P Y121V R136N N171T Y178T",7
"lib2","SARS-CoV-2","AGGAGATATTAAGAAT",15,12.64,NA,NA,NA,NA,NA,NA,"stop","I2* Q79P",2
"lib2","SARS-CoV-2","AGGAGATCCAGAACAA",5,0.2,NA,NA,NA,NA,NA,NA,"stop","P54*",1
"lib2","SARS-CoV-2","AGGAGATCTACTATAG",1,20.49,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5S S113V F167R",3
"lib2","SARS-CoV-2","AGGAGATGCAGCCGCA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","P7T F17* K87E",3
"lib2","SARS-CoV-2","AGGAGATTATAACAAA",10,52.9,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A14V S41T V103W F126L C195Y",5
"lib2","SARS-CoV-2","AGGAGATTTAATCGCA",6,14.54,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","V103G D112L C195F",3
"lib2","SARS-CoV-2","AGGAGCAAATAACAAC",22,367.9,10.04,-0.8,0.06,2.35,1.03,0,">1 nonsynonymous","R16D R127G L188Y",3
"lib2","SARS-CoV-2","AGGAGCAAGTAAAATC",5,155.74,10.72,-0.11,0.05,2.96,1.04,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","AGGAGCATGTACTAGA",1,36.41,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C49V C61E D68M S129V",4
"lib2","SARS-CoV-2","AGGAGCATGTTTCACA",3,73,6.05,-4.78,1.03,1.5,1.11,0.02,">1 nonsynonymous","K48F S113C N120L G146T G152R T201N",6
"lib2","SARS-CoV-2","AGGAGCCAACAGGAAT",1,0.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib2","SARS-CoV-2","AGGAGCCAACGGTACC",3,30.01,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A89V Q168P A190R",3
"lib2","SARS-CoV-2","AGGAGCCATCTGGAAA",6,149.96,10.84,0.01,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAGCCGACTTTCAT",3,97.02,9.37,-1.46,0.04,2.91,1.07,0,"1 nonsynonymous","S113C",1
"lib2","SARS-CoV-2","AGGAGCCTATCGACTA",7,33.61,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","F70L L95I P161L",3
"lib2","SARS-CoV-2","AGGAGCCTGGATTTAT",4,60.61,10.82,-0.01,0.04,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAGCGAATGATATC",4,73.35,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R27D Y39S E76N Q84M N107I",5
"lib2","SARS-CoV-2","AGGAGCGAGCAACATC",1,52.05,6,-4.84,2,2.02,1.17,0.01,">1 nonsynonymous","E10S S36N K114F P161F V182G",5
"lib2","SARS-CoV-2","AGGAGCGCTCCACACA",5,51.22,6,-4.84,1.74,1.5,1.22,0.04,">1 nonsynonymous","F12N N40I N64S S147L T201R",5
"lib2","SARS-CoV-2","AGGAGCTACAAGCACT",2,24.17,10.21,-0.62,0.09,2.25,1,0.01,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","AGGAGCTCATTGTATA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6N S19L C31* F47I G174K",5
"lib2","SARS-CoV-2","AGGAGGACCAGGAATA",8,69.41,10.01,-0.83,0.08,2.32,1.03,0,"1 nonsynonymous","F185P",1
"lib2","SARS-CoV-2","AGGAGGAGACCCTCCA",17,88.5,9.02,-1.82,0.26,1.5,1.08,0.03,">1 nonsynonymous","T3L F99V S129G",3
"lib2","SARS-CoV-2","AGGAGGATAATCAAGC",8,93.44,10.74,-0.09,0.06,2.97,1.05,0,"1 nonsynonymous","L60E",1
"lib2","SARS-CoV-2","AGGAGGATGATAAAGT",6,38.41,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T63Q C158K T170W",3
"lib2","SARS-CoV-2","AGGAGGCACCGCAGAC",26,9.18,NA,NA,NA,NA,NA,NA,"stop","C6Y F99L N107* K132S",4
"lib2","SARS-CoV-2","AGGAGGCACGACAATC",6,92.73,10.86,0.03,0.05,2.91,1.08,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","AGGAGGCAGCAGCATA",1,8.47,6.07,-4.77,1.02,1.5,1.02,0.03,">1 nonsynonymous","E10W K94V V103T F160L",4
"lib2","SARS-CoV-2","AGGAGGCATAGAAAAA",1,6.88,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T15D D68G C150K",3
"lib2","SARS-CoV-2","AGGAGGCGAAATTAAC",11,29.91,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6S G86S D97N V103P",4
"lib2","SARS-CoV-2","AGGAGGCTGAACGGAT",10,29.74,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T100P G117H L125H I142T",4
"lib2","SARS-CoV-2","AGGAGGCTGATTCTCT",2,0.96,NA,NA,NA,NA,NA,NA,"stop","K94* F99V N151* T201Y",4
"lib2","SARS-CoV-2","AGGAGGGAAAAATCGT",6,51.01,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F62E F99L I138M T148C Q176M P197T",6
"lib2","SARS-CoV-2","AGGAGGGATCAAAAAG",4,11.91,9.51,-1.32,0.13,2.03,1.05,0.01,">1 nonsynonymous","A18M N110S S139Y",3
"lib2","SARS-CoV-2","AGGAGGGGAATCCTGC",4,1.71,NA,NA,NA,NA,NA,NA,"stop","F44S W106T E141S F156K T170* G174L",6
"lib2","SARS-CoV-2","AGGAGGTAACACCGTG",3,91.46,10.78,-0.06,0.03,2.92,1.09,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","AGGAGGTATAATGTAA",6,52.34,8.81,-2.03,0.06,2.95,1.11,0,">1 nonsynonymous","G117S Q168L",2
"lib2","SARS-CoV-2","AGGAGGTTAATGGCTG",1,60.99,9.73,-1.11,0.15,2.12,1.1,0.01,">1 nonsynonymous","D90S F99L",2
"lib2","SARS-CoV-2","AGGAGTAAAATATACA",6,20.89,10.45,-0.38,0.04,2.97,1.01,0,">1 nonsynonymous","S36F K87R",2
"lib2","SARS-CoV-2","AGGAGTAACAAGCGAC",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S F134R P149M",3
"lib2","SARS-CoV-2","AGGAGTAACTAGGTGT",5,8.21,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","AGGAGTAATAGAAGCG",8,106.82,9.21,-1.63,0.09,1.67,1.08,0,">1 nonsynonymous","D59T N130H D137Y",3
"lib2","SARS-CoV-2","AGGAGTACACTTCCGG",2,33.44,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K94L Y121C Y143T",3
"lib2","SARS-CoV-2","AGGAGTACAGCGATCC",3,10.15,9.55,-1.29,0.06,2,1,0,">1 nonsynonymous","S45K A81T I138L",3
"lib2","SARS-CoV-2","AGGAGTACGGGAAGTA",11,21.09,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44Q P82L I104S",3
"lib2","SARS-CoV-2","AGGAGTAGCTCCCATA",6,31.99,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","F70N T140R",2
"lib2","SARS-CoV-2","AGGAGTATAACGGGCT",4,97.43,10.82,-0.01,0.03,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGAGTATAATTCACG",2,21.59,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41L F47T T85V G117L L131C G152L",6
"lib2","SARS-CoV-2","AGGAGTATGTTGTAGT",5,168.4,8.63,-2.2,0.06,2.49,1.06,0,">1 nonsynonymous","G74K S113A P149V",3
"lib2","SARS-CoV-2","AGGAGTCAGAACCATT",1,2.8,NA,NA,NA,NA,NA,NA,"stop","N1H E10P R27G E76Q A89R C195*",6
"lib2","SARS-CoV-2","AGGAGTCATGTAACAG",1,15.37,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L38P L60Q D97N T170L G196S",5
"lib2","SARS-CoV-2","AGGAGTCCCCGAATTT",1,35.5,10.92,0.08,0.05,2.95,1.07,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","AGGAGTCCTAATAGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A22G N58M T100S L122*",4
"lib2","SARS-CoV-2","AGGAGTCGCGTGGCAA",1,6.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38D D90R F99W R124E",4
"lib2","SARS-CoV-2","AGGAGTCTTACTTTCG",2,7.67,9,-1.83,0.79,2.06,1,0.05,">1 nonsynonymous","T46P D59Q G83Y",3
"lib2","SARS-CoV-2","AGGAGTCTTTTACTCG",11,50.73,6,-4.84,2,1.5,1.18,0.03,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","AGGAGTGAAGGATACA",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117K I142H",2
"lib2","SARS-CoV-2","AGGAGTGAAGTATCTT",1,33.02,10.79,-0.05,0.11,2.86,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAGTGAAGTGACAC",2,21.5,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","Y93R Y119R",2
"lib2","SARS-CoV-2","AGGAGTGACGTCCGAA",5,37.08,7.4,-3.44,0.45,1.5,1.07,0.05,">1 nonsynonymous","G86R N171S",2
"lib2","SARS-CoV-2","AGGAGTGCCTGAACTC",2,62.46,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","I2L V20A W106M P161R Y165N Q176G",6
"lib2","SARS-CoV-2","AGGAGTGTGATGGTGC",2,12.47,9.89,-0.95,0.08,2.72,1,0,">1 nonsynonymous","C31A C61R N110S P149T",4
"lib2","SARS-CoV-2","AGGAGTGTTATAAAAT",4,23.21,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49R R127Y F134E",3
"lib2","SARS-CoV-2","AGGAGTTACCTATTAA",3,23.48,9.42,-1.41,0.1,1.88,1,0.01,">1 nonsynonymous","Y50T Q144S",2
"lib2","SARS-CoV-2","AGGAGTTCAATGAACT",5,52.06,10.81,-0.03,0.04,2.97,1.05,0,">1 nonsynonymous","I2A D90S T201S",3
"lib2","SARS-CoV-2","AGGAGTTCACACTAGC",1,18.8,10.79,-0.05,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGAGTTTATTACGGA",5,39.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61D D68K T100L",3
"lib2","SARS-CoV-2","AGGATAAAAACACCCT",1,54.83,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89N F160Y Y175L H189S",4
"lib2","SARS-CoV-2","AGGATAAAACCAATAA",3,57.26,10.22,-0.62,0.06,2.76,1.01,0,">1 nonsynonymous","S29I Y66S",2
"lib2","SARS-CoV-2","AGGATAAAACGAATGA",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124N I142N",2
"lib2","SARS-CoV-2","AGGATAAACCCTGATG",4,21.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5V D34Y K48R T55V S69A C150N T201I",7
"lib2","SARS-CoV-2","AGGATAAATAGATGAT",2,29.98,8.91,-1.93,0.11,2.32,1.03,0,">1 nonsynonymous","T100S D112E",2
"lib2","SARS-CoV-2","AGGATAACGGCTTACT",5,1.16,NA,NA,NA,NA,NA,NA,"stop","K26* S43T V71T G101H Y159S S164F G174H H189F",8
"lib2","SARS-CoV-2","AGGATAAGGAGGCCCC",1,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L111Y",1
"lib2","SARS-CoV-2","AGGATAAGTAAGCTAA",7,25.98,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A81L L95R T148K",3
"lib2","SARS-CoV-2","AGGATAATAACTGTGC",14,52.09,8.78,-2.06,0.07,2.76,1.03,0,">1 nonsynonymous","K128S P161T",2
"lib2","SARS-CoV-2","AGGATAATTTGCATCA",6,101.57,10.85,0.01,0.06,2.87,1.08,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","AGGATACATTACGTGA",2,18.26,8.31,-2.52,0.16,1.95,1.08,0.01,">1 nonsynonymous","K26W R73T T140A",3
"lib2","SARS-CoV-2","AGGATACCAAAACTAC",5,67.79,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L60S E141L Q168P Q176M",4
"lib2","SARS-CoV-2","AGGATACCGATGGCGC",1,14.16,10.72,-0.11,0.08,2.9,1.11,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","AGGATACCTCTTTTCG",2,26.31,9.71,-1.12,0.07,2.94,1.12,0,"1 nonsynonymous","F126W",1
"lib2","SARS-CoV-2","AGGATACCTGAGTATA",4,40.89,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F12A A22L K87I F99T",4
"lib2","SARS-CoV-2","AGGATACGTCTAGGCA",1,10.75,9.84,-1,0.06,2.93,1,0,">1 nonsynonymous","C6N L60R",2
"lib2","SARS-CoV-2","AGGATACTACCCCAAA",12,43.61,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T3E A67P",2
"lib2","SARS-CoV-2","AGGATAGAAATTCCCA",34,26.19,NA,NA,NA,NA,NA,NA,"stop","F8W F99* W106P S139F",4
"lib2","SARS-CoV-2","AGGATAGAGTCTCAGG",1,55.85,10.49,-0.34,0.07,2.84,1.1,0,">1 nonsynonymous","S41Y K87W T100F",3
"lib2","SARS-CoV-2","AGGATAGCAAAAACTA",1,25.98,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F17V Y35F I88C F126V T170K",5
"lib2","SARS-CoV-2","AGGATAGGCCCTCTAG",13,2.46,NA,NA,NA,NA,NA,NA,"stop","G83T I104* N171L",3
"lib2","SARS-CoV-2","AGGATAGGTCATTCGC",3,39.9,10.49,-0.34,0.06,2.88,1.07,0,">1 nonsynonymous","T85L S129G",2
"lib2","SARS-CoV-2","AGGATAGTAACGCTAC",3,175.17,10.78,-0.05,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGATAGTAACTCATC",2,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R T140F",2
"lib2","SARS-CoV-2","AGGATAGTATTGAACG",5,58.51,10.16,-0.68,0.07,2.76,1.03,0,"1 nonsynonymous","A33D",1
"lib2","SARS-CoV-2","AGGATAGTGGTAGAGA",2,32.33,9.11,-1.72,0.12,2.22,1.09,0.01,">1 nonsynonymous","S19A S36R E154H",3
"lib2","SARS-CoV-2","AGGATATAGAAGCTTG",2,35.31,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S43L G116L L122S C158V",4
"lib2","SARS-CoV-2","AGGATATCGACACTCA",3,44.64,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","C6A F44S I104S Y178K",4
"lib2","SARS-CoV-2","AGGATATCGGACCCTT",5,52.13,6.41,-4.42,0.31,1.5,1.11,0.01,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","AGGATATGCTTTGGAA",4,168.45,10.92,0.08,0.04,2.93,1.07,0,">1 nonsynonymous","I2K P54K",2
"lib2","SARS-CoV-2","AGGATATGTGTAACGT",7,44.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20K N40L S129R P149S T170L",5
"lib2","SARS-CoV-2","AGGATATTTTTTACGT",16,249.31,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","E10H N107T E141N P149L Y165P",5
"lib2","SARS-CoV-2","AGGATCAAAAAACCAC",7,100.58,10.38,-0.46,0.04,2.91,1.1,0,"1 nonsynonymous","K87C",1
"lib2","SARS-CoV-2","AGGATCAACGAAATGG",8,191.85,10.81,-0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGATCAATGGGATAA",7,103.52,8.71,-2.13,0.07,2.83,1.09,0,">1 nonsynonymous","Y165H T170S",2
"lib2","SARS-CoV-2","AGGATCACATATATAG",10,54.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P82N K128I Q168L",3
"lib2","SARS-CoV-2","AGGATCATACCCATAA",1,13.94,6.8,-4.04,0.59,1.5,1.14,0.06,">1 nonsynonymous","K94E E135I",2
"lib2","SARS-CoV-2","AGGATCATTTACAATT",1,2.37,NA,NA,NA,NA,NA,NA,"stop","F8P R16P D90* R124Q P161V",5
"lib2","SARS-CoV-2","AGGATCCAATATGAAA",5,2.57,NA,NA,NA,NA,NA,NA,"stop","W23T A33P K87R N107*",4
"lib2","SARS-CoV-2","AGGATCCAGTAAGATT",1,29.23,9.66,-1.18,0.1,2.8,1.04,0,">1 nonsynonymous","D75L Y121L",2
"lib2","SARS-CoV-2","AGGATCCGACCCGTGC",3,29.87,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","L5V F12S G51P Y119C G196R K199M",6
"lib2","SARS-CoV-2","AGGATCGCACTATGAA",1,37.03,10.46,-0.38,0.06,2.9,1.02,0,">1 nonsynonymous","E141G Q163W",2
"lib2","SARS-CoV-2","AGGATCGCTAAAGCAA",8,136.9,10.29,-0.54,0.04,2.91,1.04,0,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","AGGATCGCTGCGAATT",4,40.65,8.72,-2.11,0.24,1.5,1,0.02,">1 nonsynonymous","F17W S43G I80V W106G",4
"lib2","SARS-CoV-2","AGGATCTAAGGGAATT",1,40.92,10.68,-0.15,0.08,2.9,1.12,0,">1 nonsynonymous","V37Y I104V",2
"lib2","SARS-CoV-2","AGGATCTACAGATTAA",8,166.02,10.01,-0.83,0.06,2.74,1.02,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","AGGATCTATTTCGCCT",1,20.44,10.32,-0.52,0.18,2.59,1.1,0.02,"wildtype","",0
"lib2","SARS-CoV-2","AGGATCTGTCCATGAG",6,67.49,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C61N L95C A145Y C158V",4
"lib2","SARS-CoV-2","AGGATCTTAAGAGTTG",2,19.56,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","P7E L57S G83F R136P G146L",5
"lib2","SARS-CoV-2","AGGATCTTAGGAGTTT",5,0.36,NA,NA,NA,NA,NA,NA,"stop","N40H Q84* Q144* G172F",4
"lib2","SARS-CoV-2","AGGATCTTATTAAGTT",4,46.77,6,-4.84,1.19,1.5,1.14,0.02,">1 nonsynonymous","Y21L N40A W106T Y143Q P149T",5
"lib2","SARS-CoV-2","AGGATGAAAACAGAAG",3,2.76,NA,NA,NA,NA,NA,NA,"stop","F47E G117*",2
"lib2","SARS-CoV-2","AGGATGAAGACCATTC",5,75.75,10.9,0.06,0.04,2.96,1.05,0,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","AGGATGACTAAGCCCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R K56W T140P P191I",4
"lib2","SARS-CoV-2","AGGATGATGGCAAACT",8,100.37,10.07,-0.77,0.07,2.7,1.05,0,">1 nonsynonymous","P7L D34N K114L",3
"lib2","SARS-CoV-2","AGGATGATTTGAGATG",6,60.18,8.57,-2.27,0.15,1.92,1.13,0.01,">1 nonsynonymous","G74C S129L",2
"lib2","SARS-CoV-2","AGGATGCATAGAACCA",6,6.01,NA,NA,NA,NA,NA,NA,"stop","A14* Y21R I88L V103L L122M L187T",6
"lib2","SARS-CoV-2","AGGATGCCTTCATTCT",3,4.56,NA,NA,NA,NA,NA,NA,"stop","T3Y C61* Y165V T201A",4
"lib2","SARS-CoV-2","AGGATGCTAGTAGGAA",17,213.85,10.64,-0.2,0.03,2.97,1.03,0,">1 nonsynonymous","F12V Y35W G155K",3
"lib2","SARS-CoV-2","AGGATGGAGACGAAAG",12,5.36,NA,NA,NA,NA,NA,NA,"stop","V37P N58T R73*",3
"lib2","SARS-CoV-2","AGGATGGAGTGCCTAT",2,46.72,10.09,-0.74,0.11,2.33,1,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","AGGATGGTAAGATTTT",4,35.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T55C Y165I V182S",3
"lib2","SARS-CoV-2","AGGATGTAACGGACTA",12,95.39,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","W23T P82H N107G N130W",4
"lib2","SARS-CoV-2","AGGATGTACGCTCTCC",1,4.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","AGGATTAAAAGTCAAA",8,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E D98L",2
"lib2","SARS-CoV-2","AGGATTAAAGTGATAG",8,97.06,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S19E K56P K198T",3
"lib2","SARS-CoV-2","AGGATTAACCAATAAC",7,21.51,10.02,-0.82,0.15,2.42,1,0.01,">1 nonsynonymous","A33P S53M L60K T140I",4
"lib2","SARS-CoV-2","AGGATTAAGGACCCAG",4,0.28,NA,NA,NA,NA,NA,NA,"stop","S29L A42I Y93* N107R Y159L",5
"lib2","SARS-CoV-2","AGGATTAATAATCCCA",5,160.12,10.24,-0.59,0.02,2.82,1.07,0,">1 nonsynonymous","D59W T100S T201R",3
"lib2","SARS-CoV-2","AGGATTACCAGCCGAC",8,119.84,10.14,-0.7,0.03,2.95,1.02,0,">1 nonsynonymous","N64I Q144G G174A T201W",4
"lib2","SARS-CoV-2","AGGATTACTAAGTTAT",3,162.76,10.75,-0.09,0.04,3,1.03,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","AGGATTAGGTTGGCAA",4,61.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16N F62S G86F P96G",4
"lib2","SARS-CoV-2","AGGATTATAGTCCGCT",4,94.99,10.85,0.01,0.06,2.85,1.12,0,">1 nonsynonymous","A18S L60Y K198Y",3
"lib2","SARS-CoV-2","AGGATTATTCAAACAC",7,68.75,8.68,-2.16,0.08,2.38,1.04,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","AGGATTATTTAAAAGT",8,142.39,10.85,0.02,0.05,2.94,1.07,0,">1 nonsynonymous","I2G P54T",2
"lib2","SARS-CoV-2","AGGATTCAAACCCTCT",9,65.34,6,-4.84,2,3,1.08,0,">1 nonsynonymous","K94T N171I",2
"lib2","SARS-CoV-2","AGGATTCACTCGCAGT",14,22.95,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T3F A42T R73F P96C S129T N151L",6
"lib2","SARS-CoV-2","AGGATTCCATTTCATA",6,7.75,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","F12G S113R Y121H",3
"lib2","SARS-CoV-2","AGGATTCGACAATGCG",3,56.45,10.79,-0.04,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGATTCGGCAGATTG",3,45.43,7.34,-3.5,0.19,1.51,1.09,0.01,">1 nonsynonymous","L5R L162G",2
"lib2","SARS-CoV-2","AGGATTCTAACACAAC",11,92.56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35R P133R A145N",3
"lib2","SARS-CoV-2","AGGATTCTAGGACGGG",10,246.86,7.17,-3.67,0.16,1.66,1.13,0.01,">1 nonsynonymous","K56H N157I",2
"lib2","SARS-CoV-2","AGGATTCTATTTCAAA",9,31.19,10.94,0.1,0.07,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGATTCTTCAAACCT",8,2.11,NA,NA,NA,NA,NA,NA,"stop","A14R A42L E141Q C158*",4
"lib2","SARS-CoV-2","AGGATTGAACAGGCCA",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F C49S F99H C150S",4
"lib2","SARS-CoV-2","AGGATTGAACCGAGTG",5,68.02,10.73,-0.11,0.04,2.84,1.12,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","AGGATTGAATATTATT",4,68.96,10.25,-0.59,0.1,2.84,1.14,0,"1 nonsynonymous","G116Y",1
"lib2","SARS-CoV-2","AGGATTGAATGTTAAA",7,48.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S45T G86F S113Q V182N E186N",5
"lib2","SARS-CoV-2","AGGATTGCAACAAAAC",17,167.94,6.6,-4.23,0.33,1.5,1.18,0.01,">1 nonsynonymous","S19W V37R K87R D97S S129N F156R",6
"lib2","SARS-CoV-2","AGGATTGCACTAGAAA",12,108.07,6.46,-4.37,0.57,1.5,1.28,0.03,">1 nonsynonymous","I2P A33R L38R D68E",4
"lib2","SARS-CoV-2","AGGATTGGAAATTGCA",8,23.92,6.91,-3.92,0.46,1.5,1.13,0.03,">1 nonsynonymous","N1K K48G D97P E141L",4
"lib2","SARS-CoV-2","AGGATTGTGAATTTAA",2,11.31,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V103Q R124D",2
"lib2","SARS-CoV-2","AGGATTGTGACGCATA",10,6.5,NA,NA,NA,NA,NA,NA,"stop","G86* L162C",2
"lib2","SARS-CoV-2","AGGATTTACACCTGTT",10,80.8,6,-4.84,1.78,1.5,1.13,0.01,">1 nonsynonymous","K87N T100I C150F F167C",4
"lib2","SARS-CoV-2","AGGATTTACGACACTA",5,69.88,9.07,-1.76,0.11,1.59,1.11,0,">1 nonsynonymous","N24R S45M L60K T100R F185I",5
"lib2","SARS-CoV-2","AGGATTTATACTTGGT",12,108.09,9.1,-1.74,0.16,1.5,1.02,0.01,">1 nonsynonymous","F70Y E141P",2
"lib2","SARS-CoV-2","AGGATTTATGACGAAG",7,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P Y93L P177S A192F",4
"lib2","SARS-CoV-2","AGGATTTCTAATTAAC",9,48.16,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3L V77P Y91V F156T H189P",5
"lib2","SARS-CoV-2","AGGATTTCTGTATCGG",3,5.79,7.27,-3.57,0.39,1.5,1.08,0.03,">1 nonsynonymous","C49L Q84R F156I",3
"lib2","SARS-CoV-2","AGGATTTTAGCAAATA",3,39.07,9.32,-1.51,0.35,1.75,1.33,0.07,">1 nonsynonymous","F8L P82M",2
"lib2","SARS-CoV-2","AGGCAAAAAAATCCAT",6,65.41,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R27M R73G S113F Y119D",4
"lib2","SARS-CoV-2","AGGCAAAAAATCGAAC",4,36.63,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V11P V52Y T85L",3
"lib2","SARS-CoV-2","AGGCAAAACAAATACA",9,31.06,7.34,-3.5,0.36,1.5,1.19,0.05,">1 nonsynonymous","G9K I88A G116S",3
"lib2","SARS-CoV-2","AGGCAAAAGCTCAGTA",2,36.18,6,-4.84,2,2.3,1.19,0.01,">1 nonsynonymous","Y93T S129A Y175L S200F",4
"lib2","SARS-CoV-2","AGGCAAAATTGAGAAA",6,53.04,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7D R124G K128S",3
"lib2","SARS-CoV-2","AGGCAAACATAATAAC",2,11.48,8.49,-2.35,0.21,2.54,1,0.02,">1 nonsynonymous","C6Q F156E",2
"lib2","SARS-CoV-2","AGGCAAACGAGTACTT",19,2.87,NA,NA,NA,NA,NA,NA,"stop","T3A L60F G83V A89R V115N Q144S Q163* S200L",8
"lib2","SARS-CoV-2","AGGCAAACGTCACTAA",5,39.34,6,-4.84,2,1.5,1.22,0.01,"1 nonsynonymous","N92M",1
"lib2","SARS-CoV-2","AGGCAAACTACTTTAC",9,171.64,10.68,-0.16,0.03,2.93,1.07,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","AGGCAAACTCCTAACT",2,86.41,9.82,-1.02,0.08,2.46,1.03,0,">1 nonsynonymous","D98S L183V",2
"lib2","SARS-CoV-2","AGGCAAACTTATTAAT",11,79.09,7.48,-3.36,0.21,1.5,1.11,0.02,">1 nonsynonymous","V11H Q84L Y119Q",3
"lib2","SARS-CoV-2","AGGCAAAGGTGTGTGA",2,136.91,9.92,-0.92,0.04,2.8,1.03,0,"1 nonsynonymous","Y165M",1
"lib2","SARS-CoV-2","AGGCAAAGTACTTTGC",5,61.68,7.28,-3.56,0.32,1.5,1.09,0.03,">1 nonsynonymous","N1Y A14V G117P",3
"lib2","SARS-CoV-2","AGGCAAATGGCTGAAT",10,51.22,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y21T R25K I88L V115A E135R",5
"lib2","SARS-CoV-2","AGGCAACAAACATTTC",4,44.18,6.04,-4.8,1.19,1.5,1.25,0.04,">1 nonsynonymous","N64P S69G K128A",3
"lib2","SARS-CoV-2","AGGCAACAAAGAATTT",3,16.66,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y50N S108P Q163K S200D",4
"lib2","SARS-CoV-2","AGGCAACAAGCAGTAT",3,12.09,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G51Y A89G R127I",3
"lib2","SARS-CoV-2","AGGCAACAGTACAAAC",3,24.74,9.33,-1.51,0.18,1.64,1.06,0.02,">1 nonsynonymous","D112V P133F",2
"lib2","SARS-CoV-2","AGGCAACAGTATCAAC",4,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L T55D N107S F185V",4
"lib2","SARS-CoV-2","AGGCAACCTATGGTTG",4,7.37,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Y50D T63K V71A T140A",4
"lib2","SARS-CoV-2","AGGCAACTAAGACTTG",14,124.12,8.26,-2.58,0.08,1.84,1.08,0,">1 nonsynonymous","I2R C49V K56M Y119H",4
"lib2","SARS-CoV-2","AGGCAAGAAAAAAGAT",7,7.69,NA,NA,NA,NA,NA,NA,"stop","V77* D90R P96V",3
"lib2","SARS-CoV-2","AGGCAAGAGATATGAA",5,35.56,10.93,0.09,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCAAGGACTGGGGC",5,83.87,10.22,-0.61,0.06,2.73,1.04,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","AGGCAAGTGCATATAT",13,281.18,10.22,-0.62,0.05,2.8,1.03,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","AGGCAATAAAAATAAC",13,196.73,10.14,-0.69,0.03,2.66,1.01,0,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","AGGCAATAAACCATAA",8,12.37,6.77,-4.07,0.67,3,1.11,0,">1 nonsynonymous","I2F L183Q",2
"lib2","SARS-CoV-2","AGGCAATAAATTGTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","V52P N58R G117* G146L",4
"lib2","SARS-CoV-2","AGGCAATACATGGCGA",1,10.87,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","G51T P82I D97L L122M E186D",5
"lib2","SARS-CoV-2","AGGCAATATAAGCAGT",3,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M V71L D90S C150Y",4
"lib2","SARS-CoV-2","AGGCAATATATCAATA",1,100.75,9.58,-1.26,0.03,2.89,1.11,0,">1 nonsynonymous","E10D K48E K87R F156M A192T T201V",6
"lib2","SARS-CoV-2","AGGCAATGGACGAGAG",11,213.12,10.84,0,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCAATGTACTAGGA",7,185.86,10.7,-0.14,0.04,2.91,1.05,0,">1 nonsynonymous","Y123L T201S",2
"lib2","SARS-CoV-2","AGGCAATGTCTGAAAG",5,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58K S113T N151V F185T",4
"lib2","SARS-CoV-2","AGGCAATTACACCACA",2,102.97,9.96,-0.88,0.03,2.86,1.1,0,">1 nonsynonymous","F44H F156L",2
"lib2","SARS-CoV-2","AGGCAATTATGAGCTA",1,34.65,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N4R R27A K56L Y93V S139T T201Q",6
"lib2","SARS-CoV-2","AGGCACAAATTCGCTA",3,155.92,10.16,-0.67,0.04,2.66,1,0,">1 nonsynonymous","K94N E141G",2
"lib2","SARS-CoV-2","AGGCACAAATTCTCTA",1,0.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141A",1
"lib2","SARS-CoV-2","AGGCACAAGGATTACC",8,2.8,NA,NA,NA,NA,NA,NA,"stop","I80T S129*",2
"lib2","SARS-CoV-2","AGGCACAATGGCGTAA",1,39.96,10.82,-0.01,0.06,2.9,1.03,0,">1 nonsynonymous","P149A K198S",2
"lib2","SARS-CoV-2","AGGCACACTAAACCTC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92G",1
"lib2","SARS-CoV-2","AGGCACAGACTCGGCC",1,115.14,10.78,-0.05,0.04,2.92,1.09,0,"1 nonsynonymous","N151H",1
"lib2","SARS-CoV-2","AGGCACAGCCTACACA",16,244.86,6,-4.84,2,3,1.12,0,"1 nonsynonymous","G172R",1
"lib2","SARS-CoV-2","AGGCACAGTCAAGCAA",11,165.04,10.4,-0.43,0.05,2.84,1.07,0,">1 nonsynonymous","N1V D90L",2
"lib2","SARS-CoV-2","AGGCACATAACAACAC",1,47.27,10.78,-0.06,0.04,2.97,1.05,0,">1 nonsynonymous","R78H T201Y",2
"lib2","SARS-CoV-2","AGGCACATAAGTAATT",5,1.27,NA,NA,NA,NA,NA,NA,"stop","D59K A81* W106S T140L P149F K199D",6
"lib2","SARS-CoV-2","AGGCACATCGTCAGGT",1,75.14,10.8,-0.04,0.03,2.96,1.03,0,"1 nonsynonymous","C195S",1
"lib2","SARS-CoV-2","AGGCACATCTATACCA",3,73.36,9.45,-1.38,0.08,1.87,1.1,0,"1 nonsynonymous","W106E",1
"lib2","SARS-CoV-2","AGGCACCAACAACAGG",10,135.34,10.81,-0.02,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCACCACTTCCACA",15,185.97,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35P F62A A89F R136D S164F",5
"lib2","SARS-CoV-2","AGGCACCAGGAAGACA",2,54.3,7.65,-3.18,0.21,1.72,1.09,0.02,">1 nonsynonymous","P54I C150R",2
"lib2","SARS-CoV-2","AGGCACCATATCAAGT",1,26.78,9.02,-1.82,0.07,2.86,1.12,0,">1 nonsynonymous","N1M G9D Y119E V173Y",4
"lib2","SARS-CoV-2","AGGCACCGAAATTGAC",3,75.8,10.23,-0.6,0.09,2.54,1,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","AGGCACGCATAAAAAG",13,378.5,10.53,-0.3,0.03,2.9,1.09,0,">1 nonsynonymous","L5A E10S G196W",3
"lib2","SARS-CoV-2","AGGCACGCGATCCAAC",7,100.29,10.88,0.04,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCACGGTACAAACA",27,1037.36,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S43C G51V I72H P133S P149S V153S H189N",7
"lib2","SARS-CoV-2","AGGCACGTACCCGGTC",6,87.33,10.79,-0.05,0.09,2.77,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCACTGACTTTCAA",2,25.19,10.73,-0.11,0.08,2.9,1.1,0,"1 nonsynonymous","S43F",1
"lib2","SARS-CoV-2","AGGCACTGCGCAGTGC",7,155.52,10.65,-0.19,0.05,2.92,1.06,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","AGGCAGAAAAAATTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","F12A I142*",2
"lib2","SARS-CoV-2","AGGCAGACCGCCAAGT",6,68.74,10.82,-0.02,0.06,2.97,1.05,0,"1 nonsynonymous","S36G",1
"lib2","SARS-CoV-2","AGGCAGACGAGAATGA",8,82.8,9.42,-1.42,0.06,2.87,1.13,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","AGGCAGAGATATTGAC",18,7.42,NA,NA,NA,NA,NA,NA,"stop","E10* F160I P177V",3
"lib2","SARS-CoV-2","AGGCAGATTATTGAAG",4,47.85,10.1,-0.74,0.05,2.95,1.05,0,">1 nonsynonymous","A42W F156M T201Y",3
"lib2","SARS-CoV-2","AGGCAGCATAAACGTG",4,156.48,10.5,-0.34,0.04,2.88,1.05,0,">1 nonsynonymous","V37R V103I",2
"lib2","SARS-CoV-2","AGGCAGGAAAGTATTC",2,40.46,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16I G51Y K87I A105Y I138M C150S",6
"lib2","SARS-CoV-2","AGGCAGGAGATACTTA",3,32.04,10.73,-0.1,0.08,2.92,1.11,0,">1 nonsynonymous","V37F G116P S200C",3
"lib2","SARS-CoV-2","AGGCAGTAAAGTACGC",2,0.48,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib2","SARS-CoV-2","AGGCAGTCGATGCTCA",1,19.18,10.81,-0.03,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCAGTCTACTGTTA",12,139.19,10.8,-0.03,0.03,2.98,1.04,0,"1 nonsynonymous","F62P",1
"lib2","SARS-CoV-2","AGGCATAAACTGCTTT",4,59.51,10.24,-0.6,0.05,2.79,1.05,0,">1 nonsynonymous","T55I T85L",2
"lib2","SARS-CoV-2","AGGCATAACAAGTACA",17,41.79,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","C6V T15L I80A",3
"lib2","SARS-CoV-2","AGGCATAACGACAGAA",1,47.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N58V I72L G86D W106M G116V S147K Q163A",7
"lib2","SARS-CoV-2","AGGCATAGACGCCAAA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","S19N S41* L122Y I138Y",4
"lib2","SARS-CoV-2","AGGCATATTAATAAAG",4,27.35,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","S69E T100D Y119V",3
"lib2","SARS-CoV-2","AGGCATCGGCGTTATA",2,91.13,10.79,-0.05,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCATCTATTGCCGC",17,198.43,10.06,-0.78,0.05,2.26,1.02,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","AGGCATGATGCGAGTA",5,54.83,10.88,0.04,0.03,3,1.01,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","AGGCATGGCAGTGGCT",6,37.42,9.66,-1.18,0.19,1.86,1.03,0.01,">1 nonsynonymous","N1C V77M D98T T148S",4
"lib2","SARS-CoV-2","AGGCATGTAACCAACC",4,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105H K128W",2
"lib2","SARS-CoV-2","AGGCATGTTTTATAAA",3,44.72,10.27,-0.57,0.04,2.98,1.06,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","AGGCATTCGCATTATA",3,36.23,8.87,-1.96,0.12,1.92,1.05,0.01,">1 nonsynonymous","I2S F8D N151T",3
"lib2","SARS-CoV-2","AGGCATTGAAGATCAA",10,75.41,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","Y35R K94L R136L E141L G166V",5
"lib2","SARS-CoV-2","AGGCATTTAATCAATG",21,280.02,10.82,-0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCCAAAAGGATCGC",2,31.84,10.25,-0.59,0.06,2.85,1,0,">1 nonsynonymous","T85F F134N",2
"lib2","SARS-CoV-2","AGGCCAACAAATGAAA",8,4.38,NA,NA,NA,NA,NA,NA,"stop","Y91P L95* V103L F160H",4
"lib2","SARS-CoV-2","AGGCCACAACCAACTT",1,26.76,10.73,-0.1,0.07,3,1.05,0,"1 nonsynonymous","I138D",1
"lib2","SARS-CoV-2","AGGCCACACAGTTTCA",6,28.99,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C61E I88Y I138Q",3
"lib2","SARS-CoV-2","AGGCCACCAGTAAATA",4,61.73,10.21,-0.62,0.05,2.93,1.08,0,">1 nonsynonymous","K114V G174P",2
"lib2","SARS-CoV-2","AGGCCACGCGGATATG",5,31.54,9.38,-1.45,0.19,1.81,1.17,0.01,">1 nonsynonymous","R27V S45T N92S V153G",4
"lib2","SARS-CoV-2","AGGCCACGGCCTTATA",2,0.86,NA,NA,NA,NA,NA,NA,"stop","A14Y K26S V115*",3
"lib2","SARS-CoV-2","AGGCCACTAGGTGTCC",2,0.66,NA,NA,NA,NA,NA,NA,"stop","F8S R16M T85G F99* T148A F156L",6
"lib2","SARS-CoV-2","AGGCCAGGCATGCCGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93M",1
"lib2","SARS-CoV-2","AGGCCAGGGATGAGCT",4,31.09,9.62,-1.22,0.06,2.9,1.08,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","AGGCCAGTACGCGGGA",2,3.18,NA,NA,NA,NA,NA,NA,"stop","F12C T55R G117*",3
"lib2","SARS-CoV-2","AGGCCAGTCATCATTT",3,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106G L125V",2
"lib2","SARS-CoV-2","AGGCCAGTTATACCAA",2,58.69,10.75,-0.08,0.04,2.88,1.14,0,">1 nonsynonymous","G9D N120M N151H",3
"lib2","SARS-CoV-2","AGGCCATACGTGCCAA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F T85D C102N",3
"lib2","SARS-CoV-2","AGGCCATAGGTTCATA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","I28* N107Q L188G",3
"lib2","SARS-CoV-2","AGGCCATCATTCTGCG",18,12.94,NA,NA,NA,NA,NA,NA,"stop","Y21* S45D S200C",3
"lib2","SARS-CoV-2","AGGCCATGAAATAGTG",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S T15W R25T P54T R78L",5
"lib2","SARS-CoV-2","AGGCCATTACAGTTAA",3,26.76,10.29,-0.55,0.09,2.92,1.11,0,">1 nonsynonymous","V37N E154D",2
"lib2","SARS-CoV-2","AGGCCCACGAGTTATA",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112R R127T F156M S200D",4
"lib2","SARS-CoV-2","AGGCCCAGAGGTTAAT",3,48.05,10.23,-0.6,0.07,2.82,1.07,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","AGGCCCATAAGATATG",10,4.12,NA,NA,NA,NA,NA,NA,"stop","I28* V37G G83R T140P Y178D",5
"lib2","SARS-CoV-2","AGGCCCATCCTGAACC",3,6.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R124A L162W",2
"lib2","SARS-CoV-2","AGGCCCCATTAGCAGT",2,2.86,NA,NA,NA,NA,NA,NA,"stop","C61* G83H C102R",3
"lib2","SARS-CoV-2","AGGCCCCTAGAGGGAG",13,139.88,10.68,-0.15,0.03,2.93,1.08,0,"1 nonsynonymous","N24G",1
"lib2","SARS-CoV-2","AGGCCCGATTGTTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P82L S129P F134* S164M",4
"lib2","SARS-CoV-2","AGGCCCGCGCACTGCA",12,110.91,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","S19K P54L Y165M",3
"lib2","SARS-CoV-2","AGGCCCGGAGGTCTCC",1,16.91,8.24,-2.6,0.1,2.93,1.07,0,">1 nonsynonymous","I2M P133V F156D",3
"lib2","SARS-CoV-2","AGGCCCTAACTTCCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85F K87N Y178C T201V",4
"lib2","SARS-CoV-2","AGGCCCTATCCGCTGA",11,10.26,NA,NA,NA,NA,NA,NA,"stop","G9* N120Y P149F",3
"lib2","SARS-CoV-2","AGGCCCTGATAGTAAG",3,20.65,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","AGGCCCTTGCAAAAGA",4,75.23,10.25,-0.58,0.04,2.88,1.02,0,">1 nonsynonymous","I2K C31Y",2
"lib2","SARS-CoV-2","AGGCCGATAGAACAGG",4,107.46,10.22,-0.61,0.02,2.85,1.07,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","AGGCCGGCTCTGCTTT",3,33.36,10.09,-0.75,0.09,2.83,1.11,0,">1 nonsynonymous","L60S E141S F156R",3
"lib2","SARS-CoV-2","AGGCCGGTTGACAAAC",3,0.84,NA,NA,NA,NA,NA,NA,"stop","S29V L60* L162V",3
"lib2","SARS-CoV-2","AGGCCGTACCCTCGGC",3,54.78,10.76,-0.07,0.04,2.93,1.07,0,">1 nonsynonymous","Y35F F62I",2
"lib2","SARS-CoV-2","AGGCCGTACCGATTGT",3,5.34,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","T15N D90S R127F F185H",4
"lib2","SARS-CoV-2","AGGCCGTACTGCATTT",8,2.2,NA,NA,NA,NA,NA,NA,"stop","E10Y N110* L122G K199I",4
"lib2","SARS-CoV-2","AGGCCGTCAAACGTAA",1,5.29,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","A14S S41N C102I Y121G F156S F160T",6
"lib2","SARS-CoV-2","AGGCCGTTCAACGCAT",1,7.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F Y66A L125G",3
"lib2","SARS-CoV-2","AGGCCTAAAATAAGAT",5,13.23,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6L L95N",2
"lib2","SARS-CoV-2","AGGCCTAACACTACAG",5,45.33,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9C D34G P54Q G83T Y178L",5
"lib2","SARS-CoV-2","AGGCCTACGACAACAG",16,207.37,6,-4.84,0.7,1.5,1.14,0.01,">1 nonsynonymous","G9L K26L Y175E",3
"lib2","SARS-CoV-2","AGGCCTAGAAAGGAAC",5,33.61,10.93,0.09,0.07,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGCCTATTTATCCAG",2,46.83,8.45,-2.38,0.18,1.5,1.04,0.01,">1 nonsynonymous","F17A K26R R136A",3
"lib2","SARS-CoV-2","AGGCCTCAAGTAAACA",2,15.68,10.76,-0.08,0.07,2.65,1.37,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCCTCCGTATCAAT",4,9.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D34F W106S V115L F156I",5
"lib2","SARS-CoV-2","AGGCCTCCTCAACATT",4,55.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K Y178T",2
"lib2","SARS-CoV-2","AGGCCTCTCCCCAGAA",14,241.73,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6G N120F P161T T201E",4
"lib2","SARS-CoV-2","AGGCCTGACAAAACCC",3,74.76,10.8,-0.04,0.05,2.78,1.23,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","AGGCCTTACTCTAATT",17,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S D34R R179L A190V",4
"lib2","SARS-CoV-2","AGGCGAAAACCTTATA",3,99.82,8.51,-2.33,0.08,2.2,1.08,0,">1 nonsynonymous","K87E R127S",2
"lib2","SARS-CoV-2","AGGCGAAAATCAGAAG",7,35.74,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A33S Q84H C102V",3
"lib2","SARS-CoV-2","AGGCGAAATGCCTAAA",17,189.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I138A R179S",2
"lib2","SARS-CoV-2","AGGCGAACTAACACCC",13,219.92,10.85,0.02,0.05,2.95,1.06,0,">1 nonsynonymous","I2E N151K",2
"lib2","SARS-CoV-2","AGGCGAAGGAGAAAAA",2,14.36,10.65,-0.19,0.06,2.94,1.02,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","AGGCGACAGGACGTTA",11,88.56,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T63M F70S",2
"lib2","SARS-CoV-2","AGGCGACAGTCATAAA",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S S43L V65S L183A",4
"lib2","SARS-CoV-2","AGGCGACCAGGATATG",7,17.98,6,-4.84,2,1.5,1.14,0.03,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","AGGCGAGACACCCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q L95D",2
"lib2","SARS-CoV-2","AGGCGAGATATTATAG",7,4.47,NA,NA,NA,NA,NA,NA,"stop","D34H S147*",2
"lib2","SARS-CoV-2","AGGCGAGGATTAGAAC",1,28.72,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N4C T46S G146L",3
"lib2","SARS-CoV-2","AGGCGAGGGCACGAAA",4,20.63,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C49G P133L",2
"lib2","SARS-CoV-2","AGGCGATAATGTTGTC",1,16.45,6.11,-4.73,2,1.5,1.24,0.05,">1 nonsynonymous","T55P Y93P Q163I",3
"lib2","SARS-CoV-2","AGGCGATAGATACTCG",5,25.72,10.56,-0.28,0.07,2.88,1.03,0,">1 nonsynonymous","T3S G116M",2
"lib2","SARS-CoV-2","AGGCGATATGAGAACA",4,23.79,10.65,-0.19,0.11,2.74,1.26,0,"1 nonsynonymous","C195F",1
"lib2","SARS-CoV-2","AGGCGATGTACGAGCT",14,269.14,10.7,-0.13,0.03,2.96,1.03,0,">1 nonsynonymous","I2F S147R V153S",3
"lib2","SARS-CoV-2","AGGCGATGTCTTGTAC",19,233.04,8.31,-2.53,0.13,2.73,1.1,0.01,"1 nonsynonymous","Y175R",1
"lib2","SARS-CoV-2","AGGCGCAACTCACTGT",2,35.09,8.32,-2.51,0.23,1.5,1.08,0.02,"1 nonsynonymous","A89W",1
"lib2","SARS-CoV-2","AGGCGCACGGATCCTG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","K26R C49* D137P",3
"lib2","SARS-CoV-2","AGGCGCATCATAACAT",2,11.52,6,-4.84,2,3,1.26,0.03,">1 nonsynonymous","L57H L95Q W106M Y143C",4
"lib2","SARS-CoV-2","AGGCGCCATATCCTGC",8,37.89,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","V103R P149V",2
"lib2","SARS-CoV-2","AGGCGCCATATGATAG",6,64.17,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F99S E154L T170I",3
"lib2","SARS-CoV-2","AGGCGCCATGAATTTC",1,50.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63P F70R F99S Q176M",4
"lib2","SARS-CoV-2","AGGCGCCGATTAGACC",4,63.04,6.89,-3.95,0.25,1.5,1.13,0.01,">1 nonsynonymous","L5M D34A A67F K94A T100V",5
"lib2","SARS-CoV-2","AGGCGCCTACAGCGTA",4,47.5,10.73,-0.11,0.05,2.86,1.15,0,"1 nonsynonymous","N64K",1
"lib2","SARS-CoV-2","AGGCGCCTCGACAAAA",1,59.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F17G T55S N64M T100P G172Y",5
"lib2","SARS-CoV-2","AGGCGCCTGTTACCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","P149M S184*",2
"lib2","SARS-CoV-2","AGGCGCGAACCTGGTT",7,43.44,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R73K Q84D D98M R124N P133E",5
"lib2","SARS-CoV-2","AGGCGCGACTGCCCTT",6,45.17,10.56,-0.27,0.03,2.94,1.07,0,">1 nonsynonymous","K56G S184C",2
"lib2","SARS-CoV-2","AGGCGCGATCGCCATG",14,186.56,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F167D T201G",2
"lib2","SARS-CoV-2","AGGCGCGTAACAGCCA",8,97.29,10.79,-0.04,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCGCGTTAAATTAT",5,0.55,NA,NA,NA,NA,NA,NA,"stop","N13Y V37* V115F F134V Y178D",5
"lib2","SARS-CoV-2","AGGCGCTATACAACAT",3,82.65,6.13,-4.71,0.73,1.5,1.15,0.02,">1 nonsynonymous","A89R Y178L",2
"lib2","SARS-CoV-2","AGGCGCTCGCAACATA",1,9.83,9.7,-1.13,0.31,2.48,1,0.02,">1 nonsynonymous","G9W F62T D90G",3
"lib2","SARS-CoV-2","AGGCGGACGTAGTTCC",6,39.06,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","R27A D59L G74V S139R",4
"lib2","SARS-CoV-2","AGGCGGACTATAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L95T P133* E141T",3
"lib2","SARS-CoV-2","AGGCGGACTCATTCTA",5,109.08,10.85,0.02,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCGGATTGCACACT",3,0,NA,NA,NA,NA,NA,NA,"stop","V77* V115A Q163V P169*",4
"lib2","SARS-CoV-2","AGGCGGCGACCGAGAC",5,32.34,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S69I D97M F134S Y159Q F167I",5
"lib2","SARS-CoV-2","AGGCGGCGAGAATGCT",13,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140K V173Y",2
"lib2","SARS-CoV-2","AGGCGGGACACAAAAC",2,1.72,NA,NA,NA,NA,NA,NA,"stop","L60I R136*",2
"lib2","SARS-CoV-2","AGGCGGGCGCAAACTT",3,41.97,10.42,-0.42,0.07,2.96,1,0,"1 nonsynonymous","C102I",1
"lib2","SARS-CoV-2","AGGCGGTAACGAAAAA",7,49.01,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4S S43R T55I A89E I104Y R179N",6
"lib2","SARS-CoV-2","AGGCGGTAATTCAACT",2,22.49,10.52,-0.32,0.13,2.92,1.06,0.01,">1 nonsynonymous","V37S P54N I104Y K132A",4
"lib2","SARS-CoV-2","AGGCGGTGCGACCATA",7,40.59,9.74,-1.1,0.15,1.83,1.04,0.01,">1 nonsynonymous","Y50S S139T S164R",3
"lib2","SARS-CoV-2","AGGCGGTGTTAGTGTT",8,24.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G86L F99M W106K",3
"lib2","SARS-CoV-2","AGGCGGTTCACATAAC",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43D S53P N58L N107G",4
"lib2","SARS-CoV-2","AGGCGGTTGTAAGAAT",2,6.71,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L57G D90N T100P",3
"lib2","SARS-CoV-2","AGGCGTAACGAAATAT",2,41.66,10.85,0.01,0.09,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGCGTAATAACAATG",10,60.57,10.8,-0.03,0.06,2.95,1.08,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","AGGCGTATCAGCCTAA",1,30.7,10.26,-0.58,0.04,2.92,1,0,"1 nonsynonymous","L57G",1
"lib2","SARS-CoV-2","AGGCGTCACTAAACTA",9,151.31,10.24,-0.59,0.06,2.76,1.04,0,">1 nonsynonymous","A14S A81W",2
"lib2","SARS-CoV-2","AGGCGTGCGTATATAG",6,69.86,9.5,-1.34,0.06,1.82,1.1,0,">1 nonsynonymous","V32F W106S K114R",3
"lib2","SARS-CoV-2","AGGCGTGTGACTTAAA",9,235.89,10.67,-0.17,0.03,2.91,1.04,0,">1 nonsynonymous","T3L S139N",2
"lib2","SARS-CoV-2","AGGCGTTAAAACGGAG",5,22.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K S53F P161V",3
"lib2","SARS-CoV-2","AGGCGTTCGATTCAAA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","A42* G166P",2
"lib2","SARS-CoV-2","AGGCGTTCTTGATTCA",4,23.89,10.26,-0.58,0.12,2.05,1.07,0.01,">1 nonsynonymous","T55G C61E E76V L188P",4
"lib2","SARS-CoV-2","AGGCTAAAACTCACAA",8,88.55,10.8,-0.03,0.04,2.94,1.05,0,"1 nonsynonymous","T201D",1
"lib2","SARS-CoV-2","AGGCTAAACTTGTAAC",13,87.62,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L5A F8S G86Y N157Y V182T",5
"lib2","SARS-CoV-2","AGGCTAAAGGCAAACC",2,13.45,10.15,-0.68,0.11,2.79,1.25,0.01,">1 nonsynonymous","R78L T100Y L125F",3
"lib2","SARS-CoV-2","AGGCTAATGAAGTTAA",12,136.6,10.69,-0.14,0.03,2.92,1.07,0,"1 nonsynonymous","T85F",1
"lib2","SARS-CoV-2","AGGCTAATGCGATAAA",1,13.09,10.83,-0.01,0.11,2.93,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGGCTAATTTAACATC",6,116.78,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C150A P161M",2
"lib2","SARS-CoV-2","AGGCTACAAGTGCTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10M T15C Q144*",3
"lib2","SARS-CoV-2","AGGCTACAGCCTAAGT",8,44.78,9.06,-1.78,0.13,1.75,1.07,0.01,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","AGGCTACATCATAGAA",3,31.72,10.19,-0.65,0.1,2.57,1.03,0.01,">1 nonsynonymous","A89T L122D",2
"lib2","SARS-CoV-2","AGGCTACCACCAAATA",3,110.11,10.24,-0.6,0.03,2.98,1.02,0,">1 nonsynonymous","E10G E154N",2
"lib2","SARS-CoV-2","AGGCTACCCAATATTA",11,48.26,6.3,-4.54,0.29,1.5,1.15,0.01,">1 nonsynonymous","V77Q P82W Y119S T201L",4
"lib2","SARS-CoV-2","AGGCTACCTATTTCAG",7,54.39,8.75,-2.09,0.11,1.83,1.11,0.01,">1 nonsynonymous","N151F Y165I",2
"lib2","SARS-CoV-2","AGGCTACGAGAACATT",6,133.39,10.38,-0.46,0.03,2.92,1.04,0,">1 nonsynonymous","V37W G83V",2
"lib2","SARS-CoV-2","AGGCTAGAACAGTAAT",8,39.82,8.44,-2.39,0.38,1.5,1,0.05,">1 nonsynonymous","A14P Y39R Q79R A190P",4
"lib2","SARS-CoV-2","AGGCTAGCCAGAGCCA",11,174.7,10.66,-0.18,0.04,2.89,1.06,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","AGGCTAGCTTAAGTTG",7,101.17,9.68,-1.16,0.06,2.1,1.06,0,">1 nonsynonymous","Q84L D90L",2
"lib2","SARS-CoV-2","AGGCTAGTCAAGAAAC",7,169.14,10.25,-0.58,0.04,2.93,1.1,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","AGGCTAGTCAGATATA",4,25.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A G86V K114T Y165S",4
"lib2","SARS-CoV-2","AGGCTATAAGAGCTAA",9,60.2,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50L K94S P149L",3
"lib2","SARS-CoV-2","AGGCTATATTTCTGTA",3,30.05,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","F17L I28A N157T Y165M",4
"lib2","SARS-CoV-2","AGGCTATCCAAACATC",3,104.52,8.63,-2.2,0.08,2.54,1.11,0,">1 nonsynonymous","L111T I138F",2
"lib2","SARS-CoV-2","AGGCTATGACCTGACC",4,53.02,8.49,-2.34,0.09,2.43,1.12,0,">1 nonsynonymous","G51S N58F L125H",3
"lib2","SARS-CoV-2","AGGCTATGATAAAAGG",4,63.75,8.58,-2.25,0.08,1.67,1.05,0,">1 nonsynonymous","T3S Y35V S45E A81Q K87T A105V E141V T148A",8
"lib2","SARS-CoV-2","AGGCTCAAACAGCCTT",14,3.19,NA,NA,NA,NA,NA,NA,"stop","Y35V F44S L57F W106V C158V Y175*",6
"lib2","SARS-CoV-2","AGGCTCACAACTTTTT",5,129.5,8.79,-2.05,0.07,1.97,1.07,0,">1 nonsynonymous","E10R P177S",2
"lib2","SARS-CoV-2","AGGCTCATAACAACAC",2,39.28,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5K G83F K87D S113L P177W",5
"lib2","SARS-CoV-2","AGGCTCCCCTAAAGCT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","L5T N58T N64L G83N P133* K199Y",6
"lib2","SARS-CoV-2","AGGCTCCGAGCCTAGT",4,11.86,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","W106D",1
"lib2","SARS-CoV-2","AGGCTCGACACTATAG",4,2.82,NA,NA,NA,NA,NA,NA,"stop","N64H G86*",2
"lib2","SARS-CoV-2","AGGCTCGTGGGGTTTC",4,33.27,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","L38M G83R N92H",3
"lib2","SARS-CoV-2","AGGCTGAAGCAATATT",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I T55L A67R W106Y R124V",5
"lib2","SARS-CoV-2","AGGCTGACTGAAATCC",3,24.57,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S19K A89S S113T T201L",4
"lib2","SARS-CoV-2","AGGCTGATTAAGTGCT",9,66.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37I F44R Y91C E135M",4
"lib2","SARS-CoV-2","AGGCTGATTACAGAAG",1,10.83,6,-4.84,2,2.49,1.21,0.01,">1 nonsynonymous","C49F D90S D112A Y119V",4
"lib2","SARS-CoV-2","AGGCTGCAGGTATATG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4D T201*",2
"lib2","SARS-CoV-2","AGGCTGCCATTACGGT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","N4Y A14Y V20E K56T F62I N107* L122P",7
"lib2","SARS-CoV-2","AGGCTGCGAGGCGACT",4,71.5,9.15,-1.69,0.12,2.74,1.13,0.01,">1 nonsynonymous","Y121S G174K K199R",3
"lib2","SARS-CoV-2","AGGCTGGCTCTATCTA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","L122S Y143* T170L",3
"lib2","SARS-CoV-2","AGGCTGGGCACTCACA",1,48.55,10.62,-0.22,0.05,2.95,1.07,0,"1 nonsynonymous","N58K",1
"lib2","SARS-CoV-2","AGGCTGGTTTCCGGAT",2,113.56,8.88,-1.96,0.06,2.89,1.09,0,">1 nonsynonymous","P7E F160G G166T Y175F",4
"lib2","SARS-CoV-2","AGGCTGTAAAACTGAA",7,19.67,9.22,-1.62,0.18,1.5,1.06,0.02,">1 nonsynonymous","S29A L60H C102F",3
"lib2","SARS-CoV-2","AGGCTGTACGAAAATT",1,74.68,10.81,-0.03,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGCTGTTGTTTCGCG",13,25.5,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N13G N58F P96L",3
"lib2","SARS-CoV-2","AGGCTGTTTACGTATG",26,7.34,NA,NA,NA,NA,NA,NA,"stop","N4R W23Q L95P D112* Y123* R127P P149Q C158N N171R",9
"lib2","SARS-CoV-2","AGGCTTAAAAATAAAA",2,50.2,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A18E V65K N157H",3
"lib2","SARS-CoV-2","AGGCTTAAATCATTTT",3,42.9,6.24,-4.6,0.83,1.5,1.22,0.03,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","AGGCTTAAGGTGATCG",6,66.11,9.96,-0.87,0.04,2.79,1.01,0,">1 nonsynonymous","Y39M A42S P54T K94H K114T V173C S200T",7
"lib2","SARS-CoV-2","AGGCTTACACCCCAAA",2,5.4,10.35,-0.49,0.06,3,1,0,">1 nonsynonymous","F44D K128V",2
"lib2","SARS-CoV-2","AGGCTTACGATACAAC",3,99.3,10.88,0.04,0.06,2.93,1.1,0,"1 nonsynonymous","Y39K",1
"lib2","SARS-CoV-2","AGGCTTAGATTTCATT",8,30.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V77D P149S",2
"lib2","SARS-CoV-2","AGGCTTCACACAACTA",5,8.92,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","F44R G51L T63W D90T",4
"lib2","SARS-CoV-2","AGGCTTCGATAAAACG",1,35.71,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L38W Y123P",2
"lib2","SARS-CoV-2","AGGCTTCGCGATATGA",8,40.16,10.05,-0.78,0.07,2.61,1.03,0,">1 nonsynonymous","K56S A81N",2
"lib2","SARS-CoV-2","AGGCTTGACAATCGAC",3,39.49,9.72,-1.12,0.11,2.22,1.07,0.01,">1 nonsynonymous","V11R Y35L E141S",3
"lib2","SARS-CoV-2","AGGCTTGACGTACCAA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","G155C G166*",2
"lib2","SARS-CoV-2","AGGCTTGGGAAGATCA",11,56.53,6,-4.84,2,1.68,1.19,0.01,">1 nonsynonymous","G86D N130S G152D V180Y",4
"lib2","SARS-CoV-2","AGGCTTGGGGCGCAAG",1,11.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6I R16I K56V V103F",4
"lib2","SARS-CoV-2","AGGCTTTAAAAGTAAG",7,77.84,6,-4.84,1.11,1.5,1.16,0.02,">1 nonsynonymous","F126I P133A Y143K",3
"lib2","SARS-CoV-2","AGGCTTTAACATATTA",5,9.41,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E154T F185K",2
"lib2","SARS-CoV-2","AGGCTTTACAATTGTG",4,38.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2T C49D D90L G152A F160Y Y178T",6
"lib2","SARS-CoV-2","AGGCTTTAGTACCGTG",15,174.84,9.02,-1.81,0.11,1.65,1.07,0,">1 nonsynonymous","N110V E135I H189F",3
"lib2","SARS-CoV-2","AGGCTTTGACAACCTT",1,7.71,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","L38M Y93G",2
"lib2","SARS-CoV-2","AGGGAAAAAACTCAAA",8,78.14,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Q84D F99G I138T K198T",4
"lib2","SARS-CoV-2","AGGGAAAATGAGACGA",7,68.54,8.41,-2.42,0.18,1.5,1.11,0.01,">1 nonsynonymous","T15S A81T R127G",3
"lib2","SARS-CoV-2","AGGGAAACCCAGGAAT",3,2.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59C",1
"lib2","SARS-CoV-2","AGGGAAAGATAATTCA",4,26.51,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L60F N92Y G116W P161V V173I",5
"lib2","SARS-CoV-2","AGGGAAAGATACCTAG",5,123.96,10.85,0.01,0.05,2.95,1.06,0,"1 nonsynonymous","V173Q",1
"lib2","SARS-CoV-2","AGGGAAAGGCGAAATT",5,87.95,10.7,-0.13,0.03,2.95,1.06,0,"1 nonsynonymous","G51Q",1
"lib2","SARS-CoV-2","AGGGAAATAAAAAACT",12,101.06,7.23,-3.61,0.24,1.5,1.18,0.01,">1 nonsynonymous","T3N C150P",2
"lib2","SARS-CoV-2","AGGGAAATATGATTAC",4,60.25,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I88N F126L A145P G155Y",4
"lib2","SARS-CoV-2","AGGGAACAATCACATG",3,21.58,10.65,-0.18,0.05,2.97,1,0,">1 nonsynonymous","Q84R D97T I104L",3
"lib2","SARS-CoV-2","AGGGAACATACTAAAA",6,7.48,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A67Y K87R I104S E141G Y178L F185S",6
"lib2","SARS-CoV-2","AGGGAACATTAGTCTA",10,91.1,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N30K T63F D97T N107H",4
"lib2","SARS-CoV-2","AGGGAACCAACGAATT",10,2.52,NA,NA,NA,NA,NA,NA,"stop","V11D D68N C102Y D112G Y175* K198C",6
"lib2","SARS-CoV-2","AGGGAACGAAGCCTTA",1,7.17,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","I28R D112T Y119K",3
"lib2","SARS-CoV-2","AGGGAAGAACATAAAT",6,110.22,10.7,-0.13,0.03,2.96,1.02,0,"1 nonsynonymous","F134N",1
"lib2","SARS-CoV-2","AGGGAAGCAACGAATA",7,161.69,10.29,-0.55,0.04,2.9,1.1,0,">1 nonsynonymous","N4M K87V K114R T201I",4
"lib2","SARS-CoV-2","AGGGAAGCAACTGTCT",6,37.49,6.39,-4.45,0.77,1.5,1.29,0.04,">1 nonsynonymous","F8T T46I D112L",3
"lib2","SARS-CoV-2","AGGGAAGGAACTAAAA",2,96.04,10.93,0.09,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGAAGGGCAGAGTG",8,20.57,6,-4.84,0.83,3,1.13,0.01,">1 nonsynonymous","G83L D97S V103Y G117T R127L",5
"lib2","SARS-CoV-2","AGGGAAGGTAATACAT",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F K56V D90I F99S T140S N151K",6
"lib2","SARS-CoV-2","AGGGAAGTCATAAACC",7,136.61,6.29,-4.55,0.37,1.83,1.17,0.01,">1 nonsynonymous","K132R C150R",2
"lib2","SARS-CoV-2","AGGGAAGTTATCATTA",1,21.71,6,-4.84,1.73,1.5,1.2,0.03,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","AGGGAATAGTATGTTA",1,8.08,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","D34Q D112W",2
"lib2","SARS-CoV-2","AGGGAATATCTATAAT",8,138.77,10.84,0,0.07,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGAATCATTAATCA",10,4.17,NA,NA,NA,NA,NA,NA,"stop","L95G R136C N151*",3
"lib2","SARS-CoV-2","AGGGAATGCTCTGAAC",14,137.45,6.1,-4.74,0.47,1.5,1.15,0,">1 nonsynonymous","I2F T63Q D112S Q168R",4
"lib2","SARS-CoV-2","AGGGAATGTGGGGTTT",6,58.17,10.54,-0.3,0.16,2.57,1.21,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGGGAATTCTCACATA",5,0.04,NA,NA,NA,NA,NA,NA,"stop","A33R A42G D59G Y66W Q84W N157H S184* T201*",8
"lib2","SARS-CoV-2","AGGGACAAAGCGCCTT",21,197.46,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F17V A18P N24L P96R G166N R179K",6
"lib2","SARS-CoV-2","AGGGACAAATCTGGAC",3,116.62,10.75,-0.09,0.05,2.88,1.08,0,">1 nonsynonymous","T3I C61N",2
"lib2","SARS-CoV-2","AGGGACACATTTTTCA",6,18.96,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G74V D137L",2
"lib2","SARS-CoV-2","AGGGACATATCGTAAC",8,123.12,10.06,-0.78,0.05,2.59,1.04,0,">1 nonsynonymous","E10F S36A",2
"lib2","SARS-CoV-2","AGGGACATTTAAGTAG",2,27.98,6.05,-4.79,1.46,1.5,1.22,0.04,">1 nonsynonymous","L5A K132D D137M",3
"lib2","SARS-CoV-2","AGGGACCAGACGTGAT",17,351.71,6.13,-4.71,0.49,1.5,1.17,0.01,">1 nonsynonymous","E10A N118S F156D Y178V",4
"lib2","SARS-CoV-2","AGGGACCAGCTGCAAA",14,144.72,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L95T Y178L",2
"lib2","SARS-CoV-2","AGGGACCTGTGTTGAT",2,13.65,6.08,-4.75,2,1.5,1.17,0.05,">1 nonsynonymous","R25Q N92G L122G G152T",4
"lib2","SARS-CoV-2","AGGGACGATAGTACAA",1,14.3,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","N4H G86Y K128L G152D L188P",5
"lib2","SARS-CoV-2","AGGGACGCACTACAAA",7,35.04,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L5M K56Q Y93D",3
"lib2","SARS-CoV-2","AGGGACGTTAGATCCC",1,0.5,NA,NA,NA,NA,NA,NA,"stop","S43* T85N K114R Y121E",4
"lib2","SARS-CoV-2","AGGGACTAAATAATCC",5,0,NA,NA,NA,NA,NA,NA,"stop","I80L G116*",2
"lib2","SARS-CoV-2","AGGGACTACAACAGAA",3,13.55,6.11,-4.73,0.38,2.59,1.1,0,">1 nonsynonymous","C49F A89W D137A",3
"lib2","SARS-CoV-2","AGGGACTATCTCTACA",10,110.64,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35W S108P V115G E135T V173L R179S",6
"lib2","SARS-CoV-2","AGGGACTCACAACCTA",4,44.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R73K D97G C150T",3
"lib2","SARS-CoV-2","AGGGAGAACGAGAAAT",3,45.92,10.83,-0.01,0.12,2.73,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGAGACCGCAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14I S19P I28A G51F D75A K128* Q163M",7
"lib2","SARS-CoV-2","AGGGAGCACCAAGACC",8,91.02,8.28,-2.55,0.17,2.12,1.18,0.01,">1 nonsynonymous","D98S G146I",2
"lib2","SARS-CoV-2","AGGGAGCCCCACTTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8E L122I Y175K",3
"lib2","SARS-CoV-2","AGGGAGCCTTGATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49N R78P A89M D97* G116T",5
"lib2","SARS-CoV-2","AGGGAGCGCCCTGCAC",4,114.17,8.53,-2.31,0.1,2.81,1.08,0,">1 nonsynonymous","D90F G166R",2
"lib2","SARS-CoV-2","AGGGAGGATGAACAAA",3,65.34,10.91,0.07,0.06,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGGAGGGCGCAGTAG",1,5.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R27G S45L N58H A89S D97G Y119P P149M",7
"lib2","SARS-CoV-2","AGGGAGGTATACAATA",11,185.04,10.87,0.03,0.05,2.89,1.11,0,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","AGGGAGTAAAATACCA",9,56.76,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T3Y V77R D112S T201N",4
"lib2","SARS-CoV-2","AGGGAGTAAACGTTCT",11,78.17,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14G G86Q Y123I",3
"lib2","SARS-CoV-2","AGGGAGTCGATCCTTA",2,46.64,10.58,-0.26,0.07,2.79,1.04,0,"1 nonsynonymous","N58L",1
"lib2","SARS-CoV-2","AGGGAGTCTGTAAGAG",9,69.36,6.03,-4.81,0.55,1.5,1.12,0,">1 nonsynonymous","Y121M Y165S",2
"lib2","SARS-CoV-2","AGGGAGTTATTAAAGC",9,47.91,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","G9I F99G I104G",3
"lib2","SARS-CoV-2","AGGGATAAATATAAAA",3,73.76,10.81,-0.03,0.04,2.92,1.1,0,"1 nonsynonymous","C195G",1
"lib2","SARS-CoV-2","AGGGATAAGAGTACAT",4,1.59,NA,NA,NA,NA,NA,NA,"stop","F8T Y93W G146* T170M R179E",5
"lib2","SARS-CoV-2","AGGGATAATATCGGAT",8,210.46,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y39R P96A L111S K132W",4
"lib2","SARS-CoV-2","AGGGATAGGTAGCCAT",10,0,NA,NA,NA,NA,NA,NA,"stop","K48S D68* Y165T",3
"lib2","SARS-CoV-2","AGGGATATAAGAGTCA",7,0.42,NA,NA,NA,NA,NA,NA,"stop","N24F C49R S147*",3
"lib2","SARS-CoV-2","AGGGATATTCAAGGAA",3,109.81,10.83,-0.01,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGATCCCGAAAGTA",3,40.67,10.63,-0.2,0.05,3,1,0,">1 nonsynonymous","T3K G174A",2
"lib2","SARS-CoV-2","AGGGATCCCTTTTAAA",3,123.4,10.79,-0.04,0.04,2.92,1.09,0,">1 nonsynonymous","S36M I138V",2
"lib2","SARS-CoV-2","AGGGATCGCTAGGTCA",7,225.41,6.27,-4.57,0.72,1.5,1.23,0.03,">1 nonsynonymous","Y119F C158F Y165E",3
"lib2","SARS-CoV-2","AGGGATCGTTAATGTT",3,103.2,10.05,-0.79,0.06,2.79,1.04,0,">1 nonsynonymous","C6K T15R",2
"lib2","SARS-CoV-2","AGGGATCTATTCTTTT",3,27.29,10.68,-0.16,0.08,2.81,1.06,0,">1 nonsynonymous","Y35V T55F",2
"lib2","SARS-CoV-2","AGGGATCTTAAATTTA",6,51.44,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","P7F D97F C102Q P149F V173S",5
"lib2","SARS-CoV-2","AGGGATGAGGGTAGGG",3,29.75,6.13,-4.71,0.7,1.5,1.18,0.02,">1 nonsynonymous","C49K D97Y",2
"lib2","SARS-CoV-2","AGGGATGGCCATAAGA",5,40.92,6.11,-4.73,0.78,1.5,1.24,0.02,">1 nonsynonymous","W106S Y143K T170S",3
"lib2","SARS-CoV-2","AGGGATGTAGACCTGA",11,139.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5K Y39L F47L G86D V103M",5
"lib2","SARS-CoV-2","AGGGATTAAAGCGATA",5,20.51,9.72,-1.12,0.22,1.5,1.03,0.03,"1 nonsynonymous","W23Q",1
"lib2","SARS-CoV-2","AGGGATTACGCCATCC",7,3.66,NA,NA,NA,NA,NA,NA,"stop","Y66* K198S",2
"lib2","SARS-CoV-2","AGGGATTATGCCTAAA",6,40.09,6,-4.84,1.25,3,1.06,0,">1 nonsynonymous","A22S Y91L P149I F167L",4
"lib2","SARS-CoV-2","AGGGATTCCATAACCA",12,128.05,10.86,0.02,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGCAAAATCAAATG",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L E141P P161C",3
"lib2","SARS-CoV-2","AGGGCAACCTCCTACC",4,6.73,6.99,-3.85,0.61,1.5,1,0.08,">1 nonsynonymous","G9Y N13A F47L Y93R T100Y R127D F134C Y143L",8
"lib2","SARS-CoV-2","AGGGCAAGTATGTATG",4,1.88,NA,NA,NA,NA,NA,NA,"stop","Y35R K87* P197R",3
"lib2","SARS-CoV-2","AGGGCAATCAGCGCGT",7,122.47,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3R W23I T63H Y119C",4
"lib2","SARS-CoV-2","AGGGCAATCGAGAATG",1,114.71,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Q79R A105L D112P Q176N",4
"lib2","SARS-CoV-2","AGGGCAATCTAAGGTA",11,436.34,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10G L95A G146N",3
"lib2","SARS-CoV-2","AGGGCAATTATACGTG",1,11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36I L60E N107C Q144Y",4
"lib2","SARS-CoV-2","AGGGCACAGTGAGAAC",13,177.02,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K94A N109F G172L",3
"lib2","SARS-CoV-2","AGGGCACGAACTTACC",6,121.09,10.52,-0.31,0.03,2.91,1.06,0,"1 nonsynonymous","D98F",1
"lib2","SARS-CoV-2","AGGGCAGACACCTAGG",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E V103A",2
"lib2","SARS-CoV-2","AGGGCAGCTCCCAGAC",7,2.56,NA,NA,NA,NA,NA,NA,"stop","T100* F185T",2
"lib2","SARS-CoV-2","AGGGCATAGTAAACAG",1,7.68,6.05,-4.79,1.02,1.5,1.13,0.03,">1 nonsynonymous","C49Q L125D",2
"lib2","SARS-CoV-2","AGGGCATGGGATAAAC",5,6.04,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K87Y G152L F167A",3
"lib2","SARS-CoV-2","AGGGCCACGCTGACGG",2,26.41,10.72,-0.12,0.08,2.88,1.1,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","AGGGCCATACACATGG",1,43.63,8.72,-2.11,0.13,2.34,1.08,0.01,">1 nonsynonymous","N13Y Y39S K56A T100V G117A",5
"lib2","SARS-CoV-2","AGGGCCATCTCCCCCT",10,462.59,10.81,-0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGCCATTTTTACCC",2,53.1,8.07,-2.77,0.23,1.5,1.13,0.02,">1 nonsynonymous","A89S Q144K N157M G166N",4
"lib2","SARS-CoV-2","AGGGCCCCATGTGATT",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L V153L",2
"lib2","SARS-CoV-2","AGGGCCGAACTCCATT",1,10.96,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P54M K94V N107S P169C A190Y K198M",6
"lib2","SARS-CoV-2","AGGGCCGAAGAGATAA",3,93.49,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","P82V Y93C S108N Y119F Y175S",5
"lib2","SARS-CoV-2","AGGGCCGGCCCCTCCA",8,52.4,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K114L C158F G174I",3
"lib2","SARS-CoV-2","AGGGCCGTTCTGTAAC",2,36.68,11.02,0.19,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGCGACAACTTACT",1,21.31,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","T55P K87L A105K Y121G",4
"lib2","SARS-CoV-2","AGGGCGATTATCGAGT",5,159.5,10.66,-0.18,0.03,2.96,1.02,0,"1 nonsynonymous","A22G",1
"lib2","SARS-CoV-2","AGGGCGCCAAGTCATC",4,51.78,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48Y R127T T170M",3
"lib2","SARS-CoV-2","AGGGCGCTACAAATCA",8,78,10.24,-0.6,0.04,2.86,1.05,0,"1 nonsynonymous","P7I",1
"lib2","SARS-CoV-2","AGGGCGTCAAAATAAC",1,31.22,10.83,0,0.05,3,1.02,0,">1 nonsynonymous","L5R T193Y V194G",3
"lib2","SARS-CoV-2","AGGGCGTTGTACATGA",1,57.99,10.07,-0.77,0.08,2.93,1.02,0,">1 nonsynonymous","C61G G116F",2
"lib2","SARS-CoV-2","AGGGCTAAGGATTTCA",3,44.13,10.61,-0.22,0.06,2.88,1.09,0,">1 nonsynonymous","P7H G51N A105S",3
"lib2","SARS-CoV-2","AGGGCTACTAAACCAA",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I G146M",2
"lib2","SARS-CoV-2","AGGGCTAGCCCCATTT",9,123.66,9.17,-1.67,0.11,1.72,1.12,0.01,">1 nonsynonymous","F17Y C61K Q84N V115S",4
"lib2","SARS-CoV-2","AGGGCTCACCCCTATA",3,33.66,9.25,-1.59,0.27,1.8,1.27,0.04,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","AGGGCTCCAGCGTCCG",1,17.69,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y91H D98V W106L R136M C158P Y178T",6
"lib2","SARS-CoV-2","AGGGCTGCATTCACAA",2,38.91,9.24,-1.59,0.16,1.55,1.12,0.01,">1 nonsynonymous","I72M K132I",2
"lib2","SARS-CoV-2","AGGGCTGTAAATATGC",2,0.4,NA,NA,NA,NA,NA,NA,"stop","F44L S69M A81* G86T R136T S147F T201P",7
"lib2","SARS-CoV-2","AGGGCTGTGAATCTGA",7,129.03,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","R25P Y178T",2
"lib2","SARS-CoV-2","AGGGCTTAAACCACAT",1,0.11,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","AGGGCTTAAAGGCGAA",7,180.51,10.68,-0.15,0.03,2.94,1.08,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","AGGGCTTCCTCACCTG",4,24.14,10.05,-0.79,0.14,2.14,1.02,0.02,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","AGGGCTTCTTCCTATA",1,80.95,10.3,-0.54,0.04,3,1.02,0,">1 nonsynonymous","C61L K87L",2
"lib2","SARS-CoV-2","AGGGCTTGTCTGATTC",9,43.67,8.52,-2.31,0.23,1.65,1.16,0.02,">1 nonsynonymous","Y21F S41V T148F G155L",4
"lib2","SARS-CoV-2","AGGGGAAAGGGACCTG",3,51.37,10.39,-0.44,0.05,2.95,1.06,0,"1 nonsynonymous","T15M",1
"lib2","SARS-CoV-2","AGGGGAAATGTTATGC",2,57.75,10.85,0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGGAACACCGAAAG",1,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48G",1
"lib2","SARS-CoV-2","AGGGGAACAGTTTTGA",7,37.86,10.31,-0.53,0.07,2.81,1.08,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","AGGGGAACATACTTAT",19,37.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13K D68E K87L P133S I142K P149T",6
"lib2","SARS-CoV-2","AGGGGAACCCTTTGAA",6,88.81,8.72,-2.12,0.09,1.5,1.12,0,">1 nonsynonymous","T15S V77W",2
"lib2","SARS-CoV-2","AGGGGAACGAATTCTA",12,1.89,NA,NA,NA,NA,NA,NA,"stop","N64* W106I",2
"lib2","SARS-CoV-2","AGGGGAACTAGTAGAG",6,195.02,10.69,-0.14,0.03,2.93,1.06,0,">1 nonsynonymous","S41Y D98H",2
"lib2","SARS-CoV-2","AGGGGAAGATTTCCTG",6,44.14,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G9F T46Q I72H A105V S129K V153K",6
"lib2","SARS-CoV-2","AGGGGAAGTACTGGTT",5,16.83,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A42S D68A K87A R136A",4
"lib2","SARS-CoV-2","AGGGGAATATCCGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S69* G83M F99P F156P",4
"lib2","SARS-CoV-2","AGGGGAATTTTTACGA",6,109.42,6.42,-4.41,0.57,1.5,1.24,0.03,">1 nonsynonymous","C6W D90G S129H Q163E",4
"lib2","SARS-CoV-2","AGGGGACAAGTGTAAT",6,72.04,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E10L S36A C158I",3
"lib2","SARS-CoV-2","AGGGGACACTCATCCA",2,17.64,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","G51E S69I P96R",3
"lib2","SARS-CoV-2","AGGGGACAGTGACGCA",2,93.6,10.21,-0.63,0.06,2.68,1.09,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","AGGGGACATTAAGAGA",7,83.4,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","K87N N109L N118S P133L",4
"lib2","SARS-CoV-2","AGGGGACCAACCGCCT",4,56.63,8.49,-2.35,0.13,1.85,1.08,0.01,">1 nonsynonymous","N107H P149L",2
"lib2","SARS-CoV-2","AGGGGACTGGACGAAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGGGGAGCTAGCCACG",4,60.63,10.64,-0.2,0.09,2.77,1.12,0,">1 nonsynonymous","I80V T100V T140Y",3
"lib2","SARS-CoV-2","AGGGGAGGATAACGTT",4,188.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F167V A192C",2
"lib2","SARS-CoV-2","AGGGGAGTGATTGCCG",3,29.27,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","L5A V65D K87V Y121V E186D",5
"lib2","SARS-CoV-2","AGGGGATAACCAGGCG",4,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGGGGATGTTGCAAAC",17,123.63,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37L I80N I104S",3
"lib2","SARS-CoV-2","AGGGGATTATTTTAGT",9,69.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38P Q79A A105L",3
"lib2","SARS-CoV-2","AGGGGCCAAGAAAAGT",5,22.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15Q D68K Y119V F167Q",4
"lib2","SARS-CoV-2","AGGGGCCGCCCAAATA",6,65.16,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41R T46F S113L K128T G152P",5
"lib2","SARS-CoV-2","AGGGGCGATCGCCGGT",11,172.52,10.79,-0.04,0.04,2.93,1.06,0,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","AGGGGCTAAGCTGACA",4,2.3,NA,NA,NA,NA,NA,NA,"stop","L5F R27Y L95G F99E P149H Y175* F185L",7
"lib2","SARS-CoV-2","AGGGGGCAACCATAAA",4,48.17,9.15,-1.69,0.05,2.31,1.04,0,">1 nonsynonymous","C6K S36M F160L",3
"lib2","SARS-CoV-2","AGGGGGCCGCGCCAAA",3,15.96,6,-4.84,2,1.53,1.16,0.01,">1 nonsynonymous","G51R G86M F99I S147L",4
"lib2","SARS-CoV-2","AGGGGGGCTACGCGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T55S L95R I138*",3
"lib2","SARS-CoV-2","AGGGGGTTGAGAGGCA",3,24.71,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C61G Y123S G172A",3
"lib2","SARS-CoV-2","AGGGGTAAATACATAT",15,208.86,10.26,-0.58,0.03,2.82,1.04,0,">1 nonsynonymous","K56Y D98G T201E",3
"lib2","SARS-CoV-2","AGGGGTACACCTTCCT",10,113,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1I C150W T201N",3
"lib2","SARS-CoV-2","AGGGGTACCCCCTGGA",5,98.23,10,-0.83,0.08,2.13,1.07,0,"1 nonsynonymous","Y21L",1
"lib2","SARS-CoV-2","AGGGGTATTAAACAAC",4,82.32,10.76,-0.08,0.06,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGGTATTATCGCAC",2,58.47,8.26,-2.58,0.1,2.81,1.03,0.01,">1 nonsynonymous","P7S K87A G117Y E154V",4
"lib2","SARS-CoV-2","AGGGGTCAACAAACAT",4,50.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53L P96M I104L A190S",4
"lib2","SARS-CoV-2","AGGGGTCGCACGATGT",3,18.11,6.96,-3.87,0.34,1.5,1.05,0.04,">1 nonsynonymous","N1T I28K T55A D98Y",4
"lib2","SARS-CoV-2","AGGGGTGAGACATATC",10,194.77,8.67,-2.17,0.07,2.84,1.08,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","AGGGGTGCATGATAAA",4,4.66,NA,NA,NA,NA,NA,NA,"stop","S41* E141S",2
"lib2","SARS-CoV-2","AGGGGTTCTTAAAGTT",5,25.64,10.7,-0.14,0.06,2.81,1.17,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","AGGGGTTGCTCTCCTA",5,18.97,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N64V D90R G101D P197V",4
"lib2","SARS-CoV-2","AGGGTAAAAAAGTGAG",3,0.21,NA,NA,NA,NA,NA,NA,"stop","I88W T140V C158H T201*",4
"lib2","SARS-CoV-2","AGGGTAAAAAATGTCG",14,103.95,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R25T C61W D68A Y165F",4
"lib2","SARS-CoV-2","AGGGTAAAAGAACGTC",7,177.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2F N30P I72K V103C F126N G166I Q176L",7
"lib2","SARS-CoV-2","AGGGTAAACACGTACA",2,44.74,10.31,-0.53,0.06,2.92,1.04,0,">1 nonsynonymous","K48C C61M",2
"lib2","SARS-CoV-2","AGGGTAAAGCCTATTA",5,28.39,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V77W T170C",2
"lib2","SARS-CoV-2","AGGGTAACGGTAATTT",2,50.84,10.66,-0.17,0.05,2.85,1.14,0,">1 nonsynonymous","S53P K128T",2
"lib2","SARS-CoV-2","AGGGTAACGTGACAAT",5,60.11,10.12,-0.71,0.08,2.85,1.01,0,">1 nonsynonymous","C6I S53H",2
"lib2","SARS-CoV-2","AGGGTAAGAATCTGTT",3,60.1,7.93,-2.9,0.27,1.5,1.07,0.03,">1 nonsynonymous","S41P D98P Y123E",3
"lib2","SARS-CoV-2","AGGGTAAGCATGGACA",8,66.4,9.36,-1.47,0.1,1.95,1.05,0.01,">1 nonsynonymous","K56A L122W D137A",3
"lib2","SARS-CoV-2","AGGGTAAGTATAACTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83N",1
"lib2","SARS-CoV-2","AGGGTAATAGTAAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V N64L L95T T100L G174D",5
"lib2","SARS-CoV-2","AGGGTAATGGGTTGTG",10,85.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40W F99S N130A",3
"lib2","SARS-CoV-2","AGGGTAATGTATACCA",8,27.47,6.09,-4.74,0.77,3,1.14,0.01,">1 nonsynonymous","Y35K G74I",2
"lib2","SARS-CoV-2","AGGGTACCCCAATAGT",1,15.36,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","A42G C102S K198L",3
"lib2","SARS-CoV-2","AGGGTACCTATCCCAG",6,29.57,8.84,-2,0.13,1.84,1.07,0.01,">1 nonsynonymous","L5K N13M L60Q K114Q Y178N",5
"lib2","SARS-CoV-2","AGGGTACGTTGGTCGA",4,14.39,6,-4.84,2,1.91,1.05,0.02,">1 nonsynonymous","K56C G83D Y165V",3
"lib2","SARS-CoV-2","AGGGTAGATGAATACA",1,27.8,10.52,-0.32,0.1,3,1,0,">1 nonsynonymous","A42C S53I S129H",3
"lib2","SARS-CoV-2","AGGGTAGCACAATAGA",2,11.32,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A33L F99S Q163M Y175E",4
"lib2","SARS-CoV-2","AGGGTATCCGCATTTT",10,121.95,10.25,-0.58,0.02,2.96,1.04,0,">1 nonsynonymous","G155Q F160L",2
"lib2","SARS-CoV-2","AGGGTATCTCCGGTCG",11,181.43,10.02,-0.81,0.05,2.52,1.07,0,">1 nonsynonymous","D98I P149W",2
"lib2","SARS-CoV-2","AGGGTATGAAAGATAT",3,36.15,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K94N W106S S139G",3
"lib2","SARS-CoV-2","AGGGTATGGAGCATAC",1,2.22,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AGGGTCACGCTGTTCG",16,172.81,10.17,-0.67,0.03,2.74,1.02,0,">1 nonsynonymous","Y123L E154M",2
"lib2","SARS-CoV-2","AGGGTCATGATATAAG",5,104,6,-4.84,0.69,1.5,1.14,0,">1 nonsynonymous","K56R Y91D Y178I L188S",4
"lib2","SARS-CoV-2","AGGGTCATTCAGTATC",13,1.52,NA,NA,NA,NA,NA,NA,"stop","I2* R25L G152A",3
"lib2","SARS-CoV-2","AGGGTCATTCCCAAAT",2,18.5,10.81,-0.02,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGTCCCGGTTTGTC",9,188.43,10.3,-0.53,0.05,2.83,1.03,0,">1 nonsynonymous","Y91L E141F",2
"lib2","SARS-CoV-2","AGGGTCCGTGTGCGAA",1,22.83,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15S L38W K56G L131S",4
"lib2","SARS-CoV-2","AGGGTCCTATAGATGG",9,69.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F70T C150D",2
"lib2","SARS-CoV-2","AGGGTCCTTTATGGCC",1,34.65,10.85,0.02,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGTCGCAAGTAGAT",2,41.94,10.63,-0.21,0.05,2.98,1.03,0,">1 nonsynonymous","L5D D98V",2
"lib2","SARS-CoV-2","AGGGTCGTATCTGGAA",5,39.76,9.02,-1.82,0.12,1.77,1.02,0.01,">1 nonsynonymous","C6L W106L A190D",3
"lib2","SARS-CoV-2","AGGGTCTAGATATGTA",6,150.54,9.84,-1,0.06,2.3,1.12,0,">1 nonsynonymous","L5Q Y39F P96D G152H",4
"lib2","SARS-CoV-2","AGGGTCTGGGCCAAAT",4,81.42,7.4,-3.44,0.15,1.69,1.14,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","AGGGTGAAACAAAATT",5,97.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39H V71Q",2
"lib2","SARS-CoV-2","AGGGTGAACCTTGAAA",4,39.03,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","G74P",1
"lib2","SARS-CoV-2","AGGGTGAGACAGAGAA",10,97.27,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y21V S29T V71W K132S F156E",5
"lib2","SARS-CoV-2","AGGGTGATCAACGCTG",3,52.22,6.1,-4.73,0.92,1.5,1.17,0.03,">1 nonsynonymous","F70T Q176S",2
"lib2","SARS-CoV-2","AGGGTGATTAAGAGGA",5,187.55,10.73,-0.1,0.03,2.91,1.08,0,">1 nonsynonymous","Q84R Q163L",2
"lib2","SARS-CoV-2","AGGGTGCCGTTGATTG",10,131.96,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S113P G146I",2
"lib2","SARS-CoV-2","AGGGTGCCTTCGCCTG",2,8.42,10.85,0.01,0.15,2.88,1.16,0.01,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","AGGGTGCGGAGAAGGA",6,179.94,9.56,-1.28,0.04,2.82,1.11,0,">1 nonsynonymous","S36P L125S G152Q",3
"lib2","SARS-CoV-2","AGGGTGCTGAAAGAAG",3,0.39,NA,NA,NA,NA,NA,NA,"stop","Y39I V77W K128*",3
"lib2","SARS-CoV-2","AGGGTGGAACCTATCA",9,96.18,10.66,-0.18,0.05,2.88,1.12,0,">1 nonsynonymous","N64Y T100N",2
"lib2","SARS-CoV-2","AGGGTGGGCATAACAG",5,8.52,NA,NA,NA,NA,NA,NA,"stop","N1* G9W F44R S53* G86N",5
"lib2","SARS-CoV-2","AGGGTGGGCTTCATAG",4,19.38,6.07,-4.77,0.7,1.5,1.14,0.01,">1 nonsynonymous","F62I I72D Q168Y P197G",4
"lib2","SARS-CoV-2","AGGGTGGTAACCTACG",3,7.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V D112K",2
"lib2","SARS-CoV-2","AGGGTTAAAAATAAGG",2,17.77,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D59L R73L N109D P133W F156P",5
"lib2","SARS-CoV-2","AGGGTTAAAATAGGAA",12,155.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35K D112K P161A T201I",4
"lib2","SARS-CoV-2","AGGGTTAAAGGAATGA",3,32.59,6.76,-4.07,0.19,1.5,1.11,0,">1 nonsynonymous","I2D A14F N64V G152I",4
"lib2","SARS-CoV-2","AGGGTTAGTAAGAGAA",3,19.69,10.4,-0.44,0.08,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGGTTAGTACGCCAT",8,97.19,9.92,-0.92,0.07,2.4,1.03,0,">1 nonsynonymous","A81L S200P",2
"lib2","SARS-CoV-2","AGGGTTATACGTGGGC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGGGTTATATCAAAAG",5,42.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G51E G83C N107D T201M",4
"lib2","SARS-CoV-2","AGGGTTCCATTGTCAT",10,210.96,8.66,-2.17,0.09,1.86,1.14,0,">1 nonsynonymous","R27A T63Y P169T Y178I",4
"lib2","SARS-CoV-2","AGGGTTCGGAGCAAAT",11,97.19,10.58,-0.25,0.04,2.9,1.09,0,"1 nonsynonymous","E186P",1
"lib2","SARS-CoV-2","AGGGTTGACAGTTTGA",5,47.32,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","V52I V77Q G86S",3
"lib2","SARS-CoV-2","AGGGTTGAGGGCCCAA",5,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y175M P197D",2
"lib2","SARS-CoV-2","AGGGTTGATGAAATAC",7,32.99,7.95,-2.89,0.15,1.62,1.11,0.01,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","AGGGTTGCATTGTTCC",8,10.85,NA,NA,NA,NA,NA,NA,"stop","F17* S41I G86C P96R S139N",5
"lib2","SARS-CoV-2","AGGGTTGGCAGAAGCA",1,31.17,10.02,-0.81,0.07,2.77,1.05,0,">1 nonsynonymous","A33E T63Y",2
"lib2","SARS-CoV-2","AGGGTTTATTAAGTTC",4,6.85,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y50K Y93K G152H",3
"lib2","SARS-CoV-2","AGGGTTTTCCGTGCAA",4,1.05,NA,NA,NA,NA,NA,NA,"stop","F134* Q168S",2
"lib2","SARS-CoV-2","AGGTAAAAAACATCTA",1,48.01,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17S Y35S D112L K128F",4
"lib2","SARS-CoV-2","AGGTAAAATAATATTC",3,35.17,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39C T85Y D98H S129A C150F",5
"lib2","SARS-CoV-2","AGGTAAAATACAATGT",5,99.26,10.67,-0.17,0.05,2.96,1.06,0,">1 nonsynonymous","G51K L187I",2
"lib2","SARS-CoV-2","AGGTAAAATATAGTAT",3,63.42,10.48,-0.36,0.04,2.95,1.06,0,">1 nonsynonymous","V37E F62L K87I L187M",4
"lib2","SARS-CoV-2","AGGTAAAATCCAACAG",7,106.63,10.09,-0.75,0.04,2.8,1.06,0,">1 nonsynonymous","C31L N64D",2
"lib2","SARS-CoV-2","AGGTAAAATGATTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* F8G",2
"lib2","SARS-CoV-2","AGGTAAACTAGCAAAG",1,8.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L A22K A33Y G101C",4
"lib2","SARS-CoV-2","AGGTAAACTCACCCTT",10,13.8,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","AGGTAAAGAACTTAAA",9,3.16,NA,NA,NA,NA,NA,NA,"stop","A33V P54L C61* N120K Y175*",5
"lib2","SARS-CoV-2","AGGTAAAGTCGCGTAT",8,56.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10N N92Q L162D T201V",4
"lib2","SARS-CoV-2","AGGTAAATAAAGAGAA",3,39.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11I Q84S N92R V103C H189V",5
"lib2","SARS-CoV-2","AGGTAAATACCAAGAT",8,4.29,NA,NA,NA,NA,NA,NA,"stop","N30K N40*",2
"lib2","SARS-CoV-2","AGGTAAATAGAAATGA",6,113.78,10.29,-0.54,0.03,2.81,1.04,0,">1 nonsynonymous","I88L Y178H",2
"lib2","SARS-CoV-2","AGGTAAATTGATAAGC",1,20.86,10.73,-0.11,0.06,2.95,1.09,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","AGGTAACCAATTAATA",3,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64V D90R G101D P197V",4
"lib2","SARS-CoV-2","AGGTAACCATTAGGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R C102L",2
"lib2","SARS-CoV-2","AGGTAACTACACTTGA",2,0.44,NA,NA,NA,NA,NA,NA,"stop","S36D S41D D112* S147T",4
"lib2","SARS-CoV-2","AGGTAACTCCTGCGCA",5,69.33,10.2,-0.64,0.12,2.54,1,0.01,">1 nonsynonymous","F17P Y178H",2
"lib2","SARS-CoV-2","AGGTAACTGAAGAATC",8,84.48,9.23,-1.6,0.05,2.91,1.1,0,">1 nonsynonymous","Y119T V153T S200E",3
"lib2","SARS-CoV-2","AGGTAAGAACACTTTA",6,55.18,6,-4.84,1.83,1.5,1.11,0,">1 nonsynonymous","F44H N92K G152V",3
"lib2","SARS-CoV-2","AGGTAAGGACTCCTAT",14,129.42,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29Y D90H L95W",3
"lib2","SARS-CoV-2","AGGTAAGGAGCTAGTC",27,385.89,8.18,-2.65,0.13,2.2,1.08,0.01,">1 nonsynonymous","I2C G9V T46Y G146R F160S",5
"lib2","SARS-CoV-2","AGGTAAGGCGAACTTT",1,44.36,8.76,-2.07,0.11,2.85,1.17,0.01,">1 nonsynonymous","K26T N157L",2
"lib2","SARS-CoV-2","AGGTAAGGGTAACGTA",2,26.69,9.34,-1.5,0.14,2.61,1.1,0.01,">1 nonsynonymous","F44V L125H",2
"lib2","SARS-CoV-2","AGGTAAGTGAAGAGAT",2,0.47,NA,NA,NA,NA,NA,NA,"stop","A14S S41L A105* Y159P",4
"lib2","SARS-CoV-2","AGGTAATAGTGGGTAT",1,10.09,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F44S N92D R127V R136L K198L",5
"lib2","SARS-CoV-2","AGGTAATATGGCCTGT",3,66.74,8.35,-2.49,0.22,2.06,1.16,0.02,">1 nonsynonymous","G117N R136V",2
"lib2","SARS-CoV-2","AGGTAATCTATAAGAT",5,68.01,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12V S45W K128M F160L P177N",5
"lib2","SARS-CoV-2","AGGTAATGAACCTAGA",1,14.62,10.12,-0.71,0.07,2.91,1.07,0,">1 nonsynonymous","Y35K N58H",2
"lib2","SARS-CoV-2","AGGTACAAAACTGCGC",4,11.84,9.84,-0.99,0.19,1.76,1.28,0.02,">1 nonsynonymous","A33V S41L A105L",3
"lib2","SARS-CoV-2","AGGTACAACTAACAAG",3,14.51,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D68T V71A V181A H189D",4
"lib2","SARS-CoV-2","AGGTACAAGGCCACCA",3,37.47,10.83,0,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTACAATAAAATGC",16,202.79,8.12,-2.72,0.14,1.87,1.06,0.01,">1 nonsynonymous","F62R N107P Y119A",3
"lib2","SARS-CoV-2","AGGTACACATACCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L K56L T85L K94P V153G",5
"lib2","SARS-CoV-2","AGGTACACCCACAATC",2,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V R124M Y143N G155N P191W",5
"lib2","SARS-CoV-2","AGGTACACGCCCCATA",5,114.16,10.19,-0.65,0.03,2.89,1.01,0,">1 nonsynonymous","D98G G116M",2
"lib2","SARS-CoV-2","AGGTACAGGAGAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87V C102S G172D S184A T201I",5
"lib2","SARS-CoV-2","AGGTACAGGAGCCGAG",7,8.73,6,-4.84,1.58,1.5,1.26,0.02,">1 nonsynonymous","C6D D75R L95A N107W P169R P191R",6
"lib2","SARS-CoV-2","AGGTACAGTTATAATG",2,7.76,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","Y93S Y119D T201R",3
"lib2","SARS-CoV-2","AGGTACATCTGAAAAC",2,50.37,9.98,-0.86,0.04,2.81,1.08,0,">1 nonsynonymous","R16W Y35F D98V N120C",4
"lib2","SARS-CoV-2","AGGTACATTAGAATTT",11,32.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A22V D90T T100F G117A F134G Q168M",6
"lib2","SARS-CoV-2","AGGTACATTCAGAAAG",1,35.74,8.49,-2.34,0.17,1.84,1.12,0.01,">1 nonsynonymous","F12Y D34S G174L",3
"lib2","SARS-CoV-2","AGGTACCAGCATATAT",1,15.27,8.96,-1.88,0.07,3,1.02,0,">1 nonsynonymous","F62G Y119T",2
"lib2","SARS-CoV-2","AGGTACCCCTAAACAA",2,37.88,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D68T G101V G174V",3
"lib2","SARS-CoV-2","AGGTACCTGTTTCGTA",3,17.33,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V37L C49M C61F S108I G117E N157F",6
"lib2","SARS-CoV-2","AGGTACGATCTCCTAC",5,3.53,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","AGGTACGATGAAGACT",1,17.73,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N107T F167V",2
"lib2","SARS-CoV-2","AGGTACGATTCTGAGG",7,72.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K128L P149Q P161D",3
"lib2","SARS-CoV-2","AGGTACGCACTACAAT",8,64.01,10.21,-0.62,0.07,2.5,1.04,0,">1 nonsynonymous","S43V P96H",2
"lib2","SARS-CoV-2","AGGTACGCTCGAGAGT",11,152.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31S A42R F134Y C150E",4
"lib2","SARS-CoV-2","AGGTACGTATTCACTT",2,13.86,8.45,-2.38,0.34,1.5,1.02,0.04,">1 nonsynonymous","L38A D98W",2
"lib2","SARS-CoV-2","AGGTACTAAAACATCG",5,28.04,9.12,-1.72,0.1,2.9,1.16,0,">1 nonsynonymous","K87V N120C G155D",3
"lib2","SARS-CoV-2","AGGTACTAACTAACCA",4,0,NA,NA,NA,NA,NA,NA,"stop","A22L P197*",2
"lib2","SARS-CoV-2","AGGTACTAGTTAGTCT",9,22.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44C C49E D90F",3
"lib2","SARS-CoV-2","AGGTACTTATGGCAAC",12,197.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P82D P177L",2
"lib2","SARS-CoV-2","AGGTACTTTCGAAAAA",3,50.24,10.1,-0.74,0.05,3,1.03,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","AGGTAGACCTTGGCAG",6,197.97,9.76,-1.07,0.05,2.1,1.04,0,">1 nonsynonymous","K26W Y178T",2
"lib2","SARS-CoV-2","AGGTAGAGGTCTTAGA",3,76.73,10.19,-0.64,0.03,2.88,1.09,0,">1 nonsynonymous","F62N V65F",2
"lib2","SARS-CoV-2","AGGTAGATCATTGCTC",3,54.26,10.86,0.02,0.06,2.88,1.13,0,">1 nonsynonymous","T3P V11I L60Y",3
"lib2","SARS-CoV-2","AGGTAGCATATTCCAC",2,75.22,9.97,-0.86,0.1,2.2,1,0,">1 nonsynonymous","V32T N40V D90L",3
"lib2","SARS-CoV-2","AGGTAGCCTCCAGCCA",2,9.6,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","D90H D137T P149H",3
"lib2","SARS-CoV-2","AGGTAGCTGATACAAA",4,909.44,10.83,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTAGCTTCCGTTAG",5,25.32,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L5T I88Y V103A G166Q",4
"lib2","SARS-CoV-2","AGGTAGGGGCTGGAAA",1,12.22,10.77,-0.06,0.09,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTAGGTCATAGCAT",4,79.81,10.39,-0.45,0.04,2.94,1.06,0,">1 nonsynonymous","F44R T201W",2
"lib2","SARS-CoV-2","AGGTAGTAACATATTA",3,31.37,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R73T N107G G172W",3
"lib2","SARS-CoV-2","AGGTAGTAATGGTGAC",3,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89K F99S",2
"lib2","SARS-CoV-2","AGGTAGTAGAAAAAAA",7,147.82,9.27,-1.56,0.05,2.97,1.09,0,">1 nonsynonymous","C61Q G117S T201I",3
"lib2","SARS-CoV-2","AGGTAGTCCATCCAGC",17,80.47,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C49V Q144G P169W S200L",4
"lib2","SARS-CoV-2","AGGTAGTCGCCATTTA",13,119.29,10.8,-0.04,0.06,2.91,1.11,0,"1 nonsynonymous","F62Y",1
"lib2","SARS-CoV-2","AGGTATAAGAAAAATT",2,14.61,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","I80S",1
"lib2","SARS-CoV-2","AGGTATAAGAGTTATG",2,19.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47T V52H D59W E76F",4
"lib2","SARS-CoV-2","AGGTATACCACCCGAT",4,42.88,10.81,-0.02,0.06,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGTATACTTATGTGC",1,2.37,NA,NA,NA,NA,NA,NA,"stop","I88* K114P",2
"lib2","SARS-CoV-2","AGGTATAGTGACAATA",6,235.49,10.77,-0.06,0.04,2.96,1.07,0,">1 nonsynonymous","F8L C61D",2
"lib2","SARS-CoV-2","AGGTATATCCCTAAAT",8,94.38,6.44,-4.39,0.43,1.5,1.14,0.02,">1 nonsynonymous","D97H C150L",2
"lib2","SARS-CoV-2","AGGTATATGCGCAAAG",6,61.98,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F8Q I28T N118T Q144Y",4
"lib2","SARS-CoV-2","AGGTATCCGAACCAAA",7,74.54,10.85,0.01,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTATCGAATTCCGG",6,8.59,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13T F99T P149Y H189Y",4
"lib2","SARS-CoV-2","AGGTATCGAGCACAGC",3,20.28,6.05,-4.78,1.5,1.5,1.17,0.03,">1 nonsynonymous","P96S W106R R136S",3
"lib2","SARS-CoV-2","AGGTATGAAGCGAAAA",14,201.44,10.73,-0.1,0.04,2.91,1.08,0,">1 nonsynonymous","Y121F T201L",2
"lib2","SARS-CoV-2","AGGTATGAATAATGCT",11,55.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59N I72E T85K",3
"lib2","SARS-CoV-2","AGGTATGATCTGAGCG",1,12.13,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N30M N120T R127P T170L",4
"lib2","SARS-CoV-2","AGGTATGCATAGATAA",2,21.17,10.67,-0.17,0.07,2.95,1.07,0,">1 nonsynonymous","Y91L N130K",2
"lib2","SARS-CoV-2","AGGTATGTTCAGCACT",3,10.28,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","D112W N118A V180A L187S",4
"lib2","SARS-CoV-2","AGGTATTAAGCGTGCC",8,84.18,10.07,-0.77,0.05,2.86,1.06,0,">1 nonsynonymous","A14C A145S",2
"lib2","SARS-CoV-2","AGGTATTAGTCCTCAA",19,558.53,10.49,-0.34,0.03,2.92,1.05,0,"1 nonsynonymous","Y178A",1
"lib2","SARS-CoV-2","AGGTATTATTAATTCT",2,12.17,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91F N107Y",2
"lib2","SARS-CoV-2","AGGTATTCAGACACAC",4,148.14,10.41,-0.42,0.05,2.9,1.1,0,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","AGGTATTCCAATATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26I Y91R G101R",3
"lib2","SARS-CoV-2","AGGTATTGTAATGTAG",6,163.52,9.2,-1.63,0.13,1.9,1.07,0.01,">1 nonsynonymous","E141A Q176K",2
"lib2","SARS-CoV-2","AGGTATTTCCAATCTA",2,0.81,NA,NA,NA,NA,NA,NA,"stop","Y39* R73I N120R F167T",4
"lib2","SARS-CoV-2","AGGTATTTCGGGATTC",13,147.25,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F44T R78P V180F",3
"lib2","SARS-CoV-2","AGGTATTTTTGATAGC",11,188.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T85M P96N G116R R124V L131F",5
"lib2","SARS-CoV-2","AGGTCAAAAAAAGACC",3,35.36,9.13,-1.7,0.16,1.5,1,0.01,"1 nonsynonymous","C102Y",1
"lib2","SARS-CoV-2","AGGTCAAAAGCTAGTA",2,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T A105H",2
"lib2","SARS-CoV-2","AGGTCAAACAGATCGA",2,15.18,10.18,-0.66,0.17,2.48,1.05,0.01,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","AGGTCAAACATACTTG",12,46.64,8.58,-2.26,0.16,1.94,1.14,0.01,">1 nonsynonymous","F62R G155Y",2
"lib2","SARS-CoV-2","AGGTCAAACGGCTATT",8,106.77,10.5,-0.34,0.03,2.94,1.06,0,">1 nonsynonymous","T3S C61I P149R",3
"lib2","SARS-CoV-2","AGGTCAACAAACGGGT",6,128.85,8.3,-2.53,0.08,2.42,1.06,0,">1 nonsynonymous","W23F A42V G117D",3
"lib2","SARS-CoV-2","AGGTCAAGCAGACCAG",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46R Q168R",2
"lib2","SARS-CoV-2","AGGTCAATACAAAACA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","L5M N58H L95H I104E K132* Y143W",6
"lib2","SARS-CoV-2","AGGTCAATGCTATGAG",12,153.65,9.9,-0.94,0.07,2.51,1.04,0,">1 nonsynonymous","F12M V180C",2
"lib2","SARS-CoV-2","AGGTCACAAGAGATAT",5,61.73,10.92,0.09,0.03,2.94,1.07,0,"1 nonsynonymous","S147N",1
"lib2","SARS-CoV-2","AGGTCACACAAAAGAA",3,21.75,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20M P169L",2
"lib2","SARS-CoV-2","AGGTCACACAGCAACA",1,52.32,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","T3D K94S C158R",3
"lib2","SARS-CoV-2","AGGTCACATTGTTCAA",1,23.27,9.08,-1.76,0.1,2.78,1.17,0,">1 nonsynonymous","I28M Y119C",2
"lib2","SARS-CoV-2","AGGTCACCTGGGCTTG",4,31.09,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F17R F47G Y143G T170R",4
"lib2","SARS-CoV-2","AGGTCACGCGTTAAAT",1,12.81,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V11H S41A D68R V77P Y123S",5
"lib2","SARS-CoV-2","AGGTCACTATGCAATG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K P169W",2
"lib2","SARS-CoV-2","AGGTCAGACCCTTGCG",8,41.53,8.03,-2.8,0.22,1.5,1.13,0.03,">1 nonsynonymous","F44A C61F G83T A145V C195F",5
"lib2","SARS-CoV-2","AGGTCAGATGTTGAAT",3,16.83,6.8,-4.04,0.23,1.5,1.05,0.01,">1 nonsynonymous","E10F G155P G166S",3
"lib2","SARS-CoV-2","AGGTCAGTGGACCCCT",8,82.66,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49V S129L E154Y",3
"lib2","SARS-CoV-2","AGGTCATAAGATATTT",6,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G V71E A89G P133T",4
"lib2","SARS-CoV-2","AGGTCATAGGACTGAT",3,76.78,9.73,-1.11,0.06,2.68,1.02,0,">1 nonsynonymous","C31L T46I",2
"lib2","SARS-CoV-2","AGGTCCAACTCTATAA",1,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L A42P D98E",3
"lib2","SARS-CoV-2","AGGTCCAATTGCTGCA",4,46.98,10.62,-0.22,0.04,3,1.03,0,">1 nonsynonymous","V37N Y66M",2
"lib2","SARS-CoV-2","AGGTCCCGTCAGCCAA",5,2.1,NA,NA,NA,NA,NA,NA,"stop","G9* S41H Q84S S139R E186H",5
"lib2","SARS-CoV-2","AGGTCCGAAACTCACA",7,26.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35A D59W P96S R124Y",4
"lib2","SARS-CoV-2","AGGTCCGAAAGATGTT",9,69.72,6.11,-4.72,0.48,1.5,1.1,0.01,">1 nonsynonymous","Y123M P149N L183C T201R",4
"lib2","SARS-CoV-2","AGGTCCGAACAACAGA",2,0.58,NA,NA,NA,NA,NA,NA,"stop","A14D P54* T85Y",3
"lib2","SARS-CoV-2","AGGTCCGTGACACGCA",10,48.34,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N1S F70R Y143P",3
"lib2","SARS-CoV-2","AGGTCCTATTAATGCT",2,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20N C49H D59R P96F",4
"lib2","SARS-CoV-2","AGGTCCTTCGTAAGCC",1,18.6,10.73,-0.1,0.05,2.79,1.22,0,">1 nonsynonymous","L5R T201C",2
"lib2","SARS-CoV-2","AGGTCGAAAGAGAAAC",5,98.61,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","K26W P82T A89G G174R R179G",5
"lib2","SARS-CoV-2","AGGTCGAAGACAATCC",20,265.29,10.61,-0.23,0.03,2.92,1.08,0,">1 nonsynonymous","T3D S29R K87V T201S",4
"lib2","SARS-CoV-2","AGGTCGAATCAATTCG",2,19.74,10.01,-0.83,0.28,2.01,1,0.05,">1 nonsynonymous","D34T C61S P149G S184V",4
"lib2","SARS-CoV-2","AGGTCGAATCTCACAC",6,1.97,NA,NA,NA,NA,NA,NA,"stop","L5R K87T T100F V115R G166*",5
"lib2","SARS-CoV-2","AGGTCGATATCCAAAG",6,49.16,6,-4.84,2,3,1.2,0,">1 nonsynonymous","V37D A105E R179F",3
"lib2","SARS-CoV-2","AGGTCGATGATTGGGA",3,32.76,10.85,0.01,0.07,2.91,1.06,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","AGGTCGATGCCGCACA",5,270.36,10.19,-0.65,0.03,2.89,1.1,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","AGGTCGATTCGAGCAC",11,72.27,6.05,-4.79,1.27,1.5,1.31,0.03,">1 nonsynonymous","A14Y I88N",2
"lib2","SARS-CoV-2","AGGTCGCATAATATCG",6,57.22,7.35,-3.48,0.38,1.5,1.16,0.05,">1 nonsynonymous","V11P T55S S113L",3
"lib2","SARS-CoV-2","AGGTCGCTACTCTAAG",3,71.29,9.64,-1.19,0.05,2.92,1.06,0,"1 nonsynonymous","T170R",1
"lib2","SARS-CoV-2","AGGTCTACCTTCCCAA",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59R P96Y",2
"lib2","SARS-CoV-2","AGGTCTATAATTACAT",19,36.03,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14I K87S V103G",3
"lib2","SARS-CoV-2","AGGTCTATGGACTTTC",15,181.74,10.18,-0.66,0.05,2.31,1,0,">1 nonsynonymous","V103L L122Q",2
"lib2","SARS-CoV-2","AGGTCTCAATATACCC",8,88.88,6.95,-3.88,0.32,1.5,1.18,0.03,">1 nonsynonymous","N24T D90V F99Y",3
"lib2","SARS-CoV-2","AGGTCTCGTATGCAAC",2,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T P96L Y175V",3
"lib2","SARS-CoV-2","AGGTCTGAAAAGTATT",3,71.95,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F167H R179K",2
"lib2","SARS-CoV-2","AGGTCTTCACAATTAA",3,31.1,10.83,-0.01,0.05,2.98,1.04,0,">1 nonsynonymous","L5Q T55S",2
"lib2","SARS-CoV-2","AGGTCTTCATGAGATA",3,25.61,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","T3Y L5I K94I T140G V173I",5
"lib2","SARS-CoV-2","AGGTGAACCCCAATTT",3,11.97,NA,NA,NA,NA,NA,NA,"stop","C6S C61* D90Y P161V",4
"lib2","SARS-CoV-2","AGGTGAAGACTGAATT",4,27.5,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C49G K87G",2
"lib2","SARS-CoV-2","AGGTGAATGCATTAAC",2,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y S45D D68V D98S",4
"lib2","SARS-CoV-2","AGGTGACGATTTCCTG",1,34.3,9.42,-1.42,0.1,1.85,1.03,0.01,">1 nonsynonymous","T46D R136Y",2
"lib2","SARS-CoV-2","AGGTGACGCTCAACAA",2,15.12,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","E10H A42R C49A P149F N171K",5
"lib2","SARS-CoV-2","AGGTGAGACAACATTT",5,9.21,NA,NA,NA,NA,NA,NA,"stop","L5T A14Y S41D R73P Q176* T201R",6
"lib2","SARS-CoV-2","AGGTGAGATCATATAT",20,88.48,8.89,-1.95,0.13,1.5,1.12,0.01,">1 nonsynonymous","A14L K56S Y123M P149F",4
"lib2","SARS-CoV-2","AGGTGAGTCCCCCCGT",6,128.62,10.54,-0.3,0.04,2.92,1.04,0,">1 nonsynonymous","L38F T55Y D97I G146S",4
"lib2","SARS-CoV-2","AGGTGATAAATTACCC",4,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K S41P I104S",3
"lib2","SARS-CoV-2","AGGTGATACCTAACAA",23,6.72,NA,NA,NA,NA,NA,NA,"stop","S108F I142N G155C T201*",4
"lib2","SARS-CoV-2","AGGTGATGGCGGGCAC",6,10.35,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C61Y I104E",2
"lib2","SARS-CoV-2","AGGTGATGTTACATTT",5,88.59,10.36,-0.48,0.04,2.93,1.02,0,">1 nonsynonymous","Y66I G83D",2
"lib2","SARS-CoV-2","AGGTGATTAAACAGAA",1,9.88,10.84,0,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGTGCAACGTTTTCG",2,107.05,9.48,-1.36,0.05,2.91,1.07,0,"1 nonsynonymous","G117T",1
"lib2","SARS-CoV-2","AGGTGCAGAATATCAA",1,7.42,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","L122M S139G C158Y Y165A Q176S",5
"lib2","SARS-CoV-2","AGGTGCCAACGCGATT",6,13.42,6,-4.84,1.36,1.5,1.09,0.04,">1 nonsynonymous","R27E L57P V71R",3
"lib2","SARS-CoV-2","AGGTGCCCGAATTCAC",4,16.85,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","N30K G51V C61G D68A V103K S108P G117Y A145S",8
"lib2","SARS-CoV-2","AGGTGCCCGTTGGGCT",18,157.05,10.83,-0.01,0.03,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGTGCCCTCACAAAC",7,155.14,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9L R16Q S36V P54V P96M",5
"lib2","SARS-CoV-2","AGGTGCCGTAATTCCA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","C61H P96D P149H P177*",4
"lib2","SARS-CoV-2","AGGTGCGACCATCAGC",4,0.76,NA,NA,NA,NA,NA,NA,"stop","C195*",1
"lib2","SARS-CoV-2","AGGTGCGCAAGTTTAA",15,161.77,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N92W I142V G174D",3
"lib2","SARS-CoV-2","AGGTGCGCACTATATG",4,0,NA,NA,NA,NA,NA,NA,"stop","P133* N157R",2
"lib2","SARS-CoV-2","AGGTGCGTAATGAGAG",1,5.45,10.74,-0.09,0.1,2.96,1,0,">1 nonsynonymous","S29Y S147C",2
"lib2","SARS-CoV-2","AGGTGCGTACATTTAC",3,57.91,10.47,-0.36,0.03,2.9,1.1,0,">1 nonsynonymous","K56D V115G",2
"lib2","SARS-CoV-2","AGGTGCGTATACCATC",4,25.22,6,-4.84,2,3,1.3,0.04,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","AGGTGCTTCACATTGG",12,58.84,9.66,-1.17,0.13,1.86,1.13,0.01,">1 nonsynonymous","T3R F8V D90N L122H P149S S184Q",6
"lib2","SARS-CoV-2","AGGTGCTTGACCAATA",12,91.54,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60A Y123D P133G I142K",4
"lib2","SARS-CoV-2","AGGTGCTTGATGTTGT",4,57.55,9.18,-1.65,0.14,1.74,1.17,0.01,"1 nonsynonymous","V71S",1
"lib2","SARS-CoV-2","AGGTGGAACCAGCTCA",5,28.55,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","V37L F99N N120H N130V",4
"lib2","SARS-CoV-2","AGGTGGATTAGGTGGA",10,120.62,10.38,-0.46,0.04,2.88,1.07,0,">1 nonsynonymous","P7T K56S E141R",3
"lib2","SARS-CoV-2","AGGTGGCACCCCAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28M N107E G116K F134*",4
"lib2","SARS-CoV-2","AGGTGGCATTAACCAG",6,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A G51T Q168I",3
"lib2","SARS-CoV-2","AGGTGGCGAGATACAG",3,46.85,8.2,-2.64,0.29,1.5,1.09,0.03,">1 nonsynonymous","S113P P149S",2
"lib2","SARS-CoV-2","AGGTGGCTACTAATGT",2,42.4,7.57,-3.27,0.39,1.5,1.1,0.04,">1 nonsynonymous","R27G C49V",2
"lib2","SARS-CoV-2","AGGTGGCTCACAGCCT",2,64.95,10.67,-0.16,0.05,2.89,1.13,0,">1 nonsynonymous","L5W A18S R78D T201S",4
"lib2","SARS-CoV-2","AGGTGGTATGTTTGTA",5,167.35,8.27,-2.57,0.11,2.36,1.02,0,">1 nonsynonymous","A81G Q176E",2
"lib2","SARS-CoV-2","AGGTGGTGGAACCTAT",21,313.06,10.35,-0.49,0.03,2.86,1.05,0,">1 nonsynonymous","T3L A22G",2
"lib2","SARS-CoV-2","AGGTGGTTACTCTGTT",9,3.08,NA,NA,NA,NA,NA,NA,"stop","C61* C150L",2
"lib2","SARS-CoV-2","AGGTGTAATACACGAT",3,34.63,9.81,-1.03,0.12,2.45,1.05,0.01,">1 nonsynonymous","D90H K114A N120L",3
"lib2","SARS-CoV-2","AGGTGTATAGCCATAT",6,115.34,10.85,0.02,0.05,2.93,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGTGTATGACACAGT",7,19.46,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","E10A G51W S69R A81S N120Y",5
"lib2","SARS-CoV-2","AGGTGTCCCCCCATAG",1,3.48,NA,NA,NA,NA,NA,NA,"stop","A14E F44E K56* K94V N157D",5
"lib2","SARS-CoV-2","AGGTGTGACAACGACC",2,0,NA,NA,NA,NA,NA,NA,"stop","G51P C61G Y178F T201*",4
"lib2","SARS-CoV-2","AGGTGTGATATGAGAA",2,27.45,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P7L N58Y A89W A105N",4
"lib2","SARS-CoV-2","AGGTGTTCTATCGTTT",8,3.67,NA,NA,NA,NA,NA,NA,"stop","T3C A14* V65* N151I",4
"lib2","SARS-CoV-2","AGGTGTTGTAAAATCT",8,0.74,NA,NA,NA,NA,NA,NA,"stop","F12Y N40A Q84F T140R G146* V153L",6
"lib2","SARS-CoV-2","AGGTGTTTATGGGGTC",1,58.52,10.57,-0.26,0.04,2.97,1.06,0,">1 nonsynonymous","Y35L Y66S L162I",3
"lib2","SARS-CoV-2","AGGTTAAAAATTGACT",15,4.87,NA,NA,NA,NA,NA,NA,"stop","T3S S41Q V65* V77R T85K T100I K128L",7
"lib2","SARS-CoV-2","AGGTTAAACAGATTAA",1,0.87,NA,NA,NA,NA,NA,NA,"stop","L5H V65L A89* D98E S139R T148* P197L",7
"lib2","SARS-CoV-2","AGGTTAAACCAAAATT",1,31.68,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S19M F99I",2
"lib2","SARS-CoV-2","AGGTTAAATCCATGCA",10,130.14,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F44K L95K Q168R",3
"lib2","SARS-CoV-2","AGGTTAACACAGAATT",9,56.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S29L F47R S69V T201Q",4
"lib2","SARS-CoV-2","AGGTTAAGAAATCAAC",6,72.6,9.95,-0.88,0.07,2.17,1.07,0,">1 nonsynonymous","K48G K128S",2
"lib2","SARS-CoV-2","AGGTTACAAAAATTAA",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P F99A L122E S139E",4
"lib2","SARS-CoV-2","AGGTTACAAGCCAGAC",8,112.14,10.24,-0.6,0.03,2.81,1.08,0,">1 nonsynonymous","A42N I104F Y121F F160L",4
"lib2","SARS-CoV-2","AGGTTACATTAAATGA",2,42.89,7.16,-3.67,0.16,2.06,1.17,0.01,"1 nonsynonymous","R73F",1
"lib2","SARS-CoV-2","AGGTTACGTAAGCTAA",1,4.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","AGGTTACGTAATAATA",5,67.91,10.62,-0.21,0.08,2.89,1.13,0,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","AGGTTACGTAGACCTG",5,210.61,8.44,-2.39,0.12,2.87,1.06,0.01,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","AGGTTACTAACTCTGT",11,236.77,10.21,-0.62,0.04,2.96,1.03,0,">1 nonsynonymous","F8L K87Q",2
"lib2","SARS-CoV-2","AGGTTACTACCCTATC",6,156.01,8.79,-2.05,0.07,2.97,1.08,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","AGGTTACTTAATACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","N4K K128Q E141*",3
"lib2","SARS-CoV-2","AGGTTAGACACTTAAA",3,64.05,9.64,-1.19,0.06,2.76,1.05,0,">1 nonsynonymous","R136S G174Q",2
"lib2","SARS-CoV-2","AGGTTAGATAAAAAAA",2,26.31,8.58,-2.25,0.1,2.64,1.08,0,">1 nonsynonymous","F62A G146V",2
"lib2","SARS-CoV-2","AGGTTAGATTCTTTCC",4,102.94,10.79,-0.04,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTTAGCCAACTTGT",2,29.54,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F44S A89I R127K",3
"lib2","SARS-CoV-2","AGGTTAGTCTCCACCA",12,99.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35I N92Q K132Y",3
"lib2","SARS-CoV-2","AGGTTATCCGACATAT",2,14.54,10.71,-0.12,0.06,2.94,1.08,0,">1 nonsynonymous","V65M K198S",2
"lib2","SARS-CoV-2","AGGTTATGATGTTCTG",1,33.33,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","Y91L P177V",2
"lib2","SARS-CoV-2","AGGTTATGTCCTATCA",2,18.63,6.93,-3.91,0.43,1.5,1.07,0.04,"1 nonsynonymous","Y93E",1
"lib2","SARS-CoV-2","AGGTTCAAATAGTTTT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52R N92V S129F Y178P",4
"lib2","SARS-CoV-2","AGGTTCAACAATAAGG",6,65.87,10.58,-0.26,0.04,2.89,1.06,0,">1 nonsynonymous","T3R E141L",2
"lib2","SARS-CoV-2","AGGTTCAACTATATAT",2,51.9,10.24,-0.6,0.05,2.75,1.08,0,">1 nonsynonymous","C6V K198P",2
"lib2","SARS-CoV-2","AGGTTCAAGGCGCAAG",2,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L K87Y R136W Q168C",4
"lib2","SARS-CoV-2","AGGTTCAGATATTGGT",1,2.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","AGGTTCATCAGAATTA",2,0.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22V",1
"lib2","SARS-CoV-2","AGGTTCCAAGATGTCA",6,14.67,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","I2A K48F S69R N107F S184K",5
"lib2","SARS-CoV-2","AGGTTCGACAGGCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2L S36Q F44* G51V A89* N107H V153L",7
"lib2","SARS-CoV-2","AGGTTCGAGACGGACT",11,59.14,6,-4.84,2,2.01,1.28,0.02,">1 nonsynonymous","R25M V153I V182A",3
"lib2","SARS-CoV-2","AGGTTCTGAACCTATA",4,45.98,8.06,-2.77,0.15,2.42,1.08,0.01,">1 nonsynonymous","N4R E154S C158S",3
"lib2","SARS-CoV-2","AGGTTCTGGGTTAACC",2,42.49,10.3,-0.54,0.07,2.78,1,0,">1 nonsynonymous","F8I A22T",2
"lib2","SARS-CoV-2","AGGTTGAAGAATGCTA",7,88.57,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4T A81D I88L C150R C158L K199G",6
"lib2","SARS-CoV-2","AGGTTGAAGGCAGTAG",2,43.18,10.94,0.11,0.03,2.96,1.04,0,"1 nonsynonymous","Y35W",1
"lib2","SARS-CoV-2","AGGTTGAATGTGGAAA",12,306.65,8.85,-1.98,0.05,2.43,1.1,0,">1 nonsynonymous","G83L N118I",2
"lib2","SARS-CoV-2","AGGTTGAGAGGACCTA",15,95.73,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","T55L D90Q L95P T140S",4
"lib2","SARS-CoV-2","AGGTTGAGCTTGATTT",4,2.22,NA,NA,NA,NA,NA,NA,"stop","T100* Y175F",2
"lib2","SARS-CoV-2","AGGTTGATTACATTAC",4,43.2,6.37,-4.46,0.4,1.56,1.14,0.03,">1 nonsynonymous","G51V F99A I142F",3
"lib2","SARS-CoV-2","AGGTTGATTGCTTAAG",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R V77M D90Y D97V",4
"lib2","SARS-CoV-2","AGGTTGCAAAAATGAA",1,85.07,9.72,-1.11,0.08,1.79,1.04,0,">1 nonsynonymous","V173T K198T",2
"lib2","SARS-CoV-2","AGGTTGCAAAACCCAA",10,165.85,10.76,-0.08,0.04,2.9,1.06,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","AGGTTGCGAACACAAT",1,30.42,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","F12S L38T Q84Y A89D N107L F167L T201L",7
"lib2","SARS-CoV-2","AGGTTGTGGATATGTA",3,13.85,8.3,-2.54,0.25,1.77,1.14,0.03,">1 nonsynonymous","F17I N107S",2
"lib2","SARS-CoV-2","AGGTTTACGCTGACAC",7,93.24,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N64M A67D T85A G116F K198V",5
"lib2","SARS-CoV-2","AGGTTTAGATGCACCA",2,39.88,10.72,-0.11,0.06,2.83,1.1,0,">1 nonsynonymous","N120G T201N",2
"lib2","SARS-CoV-2","AGGTTTAGGCCAGCAT",1,24.77,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y35L C158A",2
"lib2","SARS-CoV-2","AGGTTTAGTTCTATGG",1,8.58,11.06,0.23,0.05,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","AGGTTTATAGCCTGCT",4,96.62,10.43,-0.41,0.06,2.9,1.08,0,">1 nonsynonymous","T46S L60T",2
"lib2","SARS-CoV-2","AGGTTTATGATGTTTG",9,5.96,NA,NA,NA,NA,NA,NA,"stop","N4A V77M Y91L V103* I142M",5
"lib2","SARS-CoV-2","AGGTTTCATCTGTGGC",5,42.08,10.77,-0.06,0.07,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AGGTTTCTCATTCACA",1,34.12,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G51Q N64I A89T G101L E154L",5
"lib2","SARS-CoV-2","AGGTTTCTGAGGCCCC",3,47.43,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","W106Y L122K P149C Q176P",4
"lib2","SARS-CoV-2","AGGTTTGCACGTATAT",1,28.32,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","L95K P177T",2
"lib2","SARS-CoV-2","AGGTTTGCGACAACGC",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G D68R N171F",3
"lib2","SARS-CoV-2","AGGTTTGCGCAGCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6V N120I S147* F167S",4
"lib2","SARS-CoV-2","AGGTTTTCAATATGGA",9,118.23,9.74,-1.1,0.09,2.27,1.02,0,">1 nonsynonymous","C49V K114E",2
"lib2","SARS-CoV-2","AGGTTTTCCATAACGA",12,191.61,10.82,-0.02,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTAAAAAACTTCACT",4,32.41,8.8,-2.03,0.14,1.96,1.12,0.01,">1 nonsynonymous","N40S C61S V103T F156A",4
"lib2","SARS-CoV-2","AGTAAAAAACTTGCGT",7,45.4,9.01,-1.82,0.05,1.97,1.01,0,"1 nonsynonymous","F8R",1
"lib2","SARS-CoV-2","AGTAAAAAATTATCTG",14,54.39,8.95,-1.89,0.18,1.5,1.06,0.01,">1 nonsynonymous","A14Y C49W G196R T201V",4
"lib2","SARS-CoV-2","AGTAAAAACATACATT",1,34.05,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","R124L E141S",2
"lib2","SARS-CoV-2","AGTAAAAACTATGCAA",3,1.03,NA,NA,NA,NA,NA,NA,"stop","P7D N13* K114R Y121Q",4
"lib2","SARS-CoV-2","AGTAAAAAGGTAGAAC",4,67.48,10.83,0,0.06,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAAAATACACAAT",6,0.81,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","AGTAAAACCAGAGTAT",4,61.33,10.84,0,0.05,2.88,1.12,0,"1 nonsynonymous","A42V",1
"lib2","SARS-CoV-2","AGTAAAACTGTATACG",6,46.94,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","V180G",1
"lib2","SARS-CoV-2","AGTAAAAGAGAAAGGA",11,181.17,10.62,-0.21,0.03,2.92,1.07,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","AGTAAAAGCACCTAAC",5,46.23,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K56S N64A I138H F167D G174H",5
"lib2","SARS-CoV-2","AGTAAAAGTCATACAG",8,223.79,10.62,-0.21,0.03,2.95,1.05,0,">1 nonsynonymous","L5M K114L",2
"lib2","SARS-CoV-2","AGTAAAATACAAATTG",7,82.06,9.74,-1.1,0.06,2.78,1.04,0,">1 nonsynonymous","V37R K56R N107Q",3
"lib2","SARS-CoV-2","AGTAAAATACTGAAGC",2,37.57,10.69,-0.15,0.05,2.94,1.03,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","AGTAAAATAGACCCAT",1,1.99,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAAATCGAAAATG",3,51.11,10.09,-0.75,0.03,2.9,1,0,">1 nonsynonymous","I2W R73T T201M",3
"lib2","SARS-CoV-2","AGTAAAATCGAACCGA",5,0.32,NA,NA,NA,NA,NA,NA,"stop","T15C R27* D34N S43D",4
"lib2","SARS-CoV-2","AGTAAAATGTGAAAAA",1,11.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T140I G146C E186I",3
"lib2","SARS-CoV-2","AGTAAAATGTTAGATC",3,39.37,10.84,0.01,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAAATTCGGCAAC",3,16.11,8.91,-1.93,0.14,2.48,1.11,0.01,">1 nonsynonymous","N107K V115N",2
"lib2","SARS-CoV-2","AGTAAACAAATTACCT",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H T100N",2
"lib2","SARS-CoV-2","AGTAAACAAGAAGCCA",3,37.65,8.09,-2.75,0.21,1.5,1.1,0.02,">1 nonsynonymous","C6L W106S",2
"lib2","SARS-CoV-2","AGTAAACAAGCTGACG",1,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28M D90S",2
"lib2","SARS-CoV-2","AGTAAACAGCAGCACA",1,21.44,10.09,-0.75,0.15,2.38,1.12,0.02,">1 nonsynonymous","K56I T85D D97I",3
"lib2","SARS-CoV-2","AGTAAACCAAAAATAA",10,2.79,NA,NA,NA,NA,NA,NA,"stop","I88* N92I F99*",3
"lib2","SARS-CoV-2","AGTAAACCAACAACAA",6,11.75,6,-4.84,2,3,1.01,0,">1 nonsynonymous","F99S Y119L G152I",3
"lib2","SARS-CoV-2","AGTAAACCAGCTATCA",4,39.62,7.07,-3.76,0.34,1.5,1.16,0.03,">1 nonsynonymous","R25W N130F",2
"lib2","SARS-CoV-2","AGTAAACCAGTGTAAC",1,44.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37L D137F T170L",3
"lib2","SARS-CoV-2","AGTAAACCATAAGTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","V65* L95M",2
"lib2","SARS-CoV-2","AGTAAACGAATAGTAT",4,5.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I V65I G86R Y93M G155A",5
"lib2","SARS-CoV-2","AGTAAACGATAAAAAA",4,133.95,9.15,-1.69,0.04,2.84,1.09,0,">1 nonsynonymous","Y119H R136S",2
"lib2","SARS-CoV-2","AGTAAACTTAACAAAA",2,2.1,NA,NA,NA,NA,NA,NA,"stop","L125E G172*",2
"lib2","SARS-CoV-2","AGTAAAGAAGTAAAAC",2,9.68,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","G101V W106H",2
"lib2","SARS-CoV-2","AGTAAAGACCAATGCG",2,15.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12N L95P S113I G152P G174S",5
"lib2","SARS-CoV-2","AGTAAAGACTTCCAAT",7,113.87,10.79,-0.05,0.05,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTAAAGATCACAGGC",1,6.82,8.36,-2.48,0.52,1.5,1,0.07,">1 nonsynonymous","S41W N157H V181F",3
"lib2","SARS-CoV-2","AGTAAAGCTGTTTAGG",1,11.33,9.53,-1.3,0.19,1.9,1.15,0.01,">1 nonsynonymous","T15P N64R S129L T148I V173C",5
"lib2","SARS-CoV-2","AGTAAAGCTTAGTATC",2,25.97,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F44P C61W G117K F167T",4
"lib2","SARS-CoV-2","AGTAAAGGAAAGACAT",3,45.38,9.67,-1.17,0.08,2.74,1.05,0,">1 nonsynonymous","S41K F62L G174H",3
"lib2","SARS-CoV-2","AGTAAAGGAAGCAGCA",14,3.89,NA,NA,NA,NA,NA,NA,"stop","D68* P96A R127Y",3
"lib2","SARS-CoV-2","AGTAAAGTCTACTACA",6,92.01,9.03,-1.8,0.06,2.84,1.11,0,"1 nonsynonymous","G117P",1
"lib2","SARS-CoV-2","AGTAAAGTGCAGTTAC",14,5.87,NA,NA,NA,NA,NA,NA,"stop","I2R K26V L38* I88Y T140K F156A",6
"lib2","SARS-CoV-2","AGTAAAGTTCAATGGT",1,17.39,6.53,-4.3,0.53,1.5,1.09,0.02,">1 nonsynonymous","Y165L Y178I",2
"lib2","SARS-CoV-2","AGTAAAGTTGTAATCG",1,16.93,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","Y21W T46V D112S Y123T S139G",5
"lib2","SARS-CoV-2","AGTAAATATAGTTGTA",5,52.47,9.84,-1,0.11,2.17,1.07,0,">1 nonsynonymous","V37R K94G",2
"lib2","SARS-CoV-2","AGTAAATCAACTTGAT",10,11.88,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15L A81K D97L A105Y Y123E",5
"lib2","SARS-CoV-2","AGTAAATCAATTTTCA",2,40.3,8.61,-2.23,0.12,2.88,1.04,0,">1 nonsynonymous","Q168L Y178A",2
"lib2","SARS-CoV-2","AGTAAATCGAAAACTC",3,105.05,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33R F47W R124D D137W",4
"lib2","SARS-CoV-2","AGTAAATGAACAAGGA",5,82.2,9.3,-1.54,0.09,1.77,1.08,0,">1 nonsynonymous","D90H F99Y",2
"lib2","SARS-CoV-2","AGTAAATGACACTATG",1,1.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23L",1
"lib2","SARS-CoV-2","AGTAAATGACCAGAAC",3,27.84,10.69,-0.14,0.05,2.91,1.06,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","AGTAAATGTGGGAATT",10,47.11,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","V20W D34N F167V",3
"lib2","SARS-CoV-2","AGTAAATTAGATAGAG",3,93.64,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N109D P169S Y175S A190P",4
"lib2","SARS-CoV-2","AGTAAATTAGTTTTAA",6,2.17,NA,NA,NA,NA,NA,NA,"stop","T3C S19* F62* I88P A105D G146R P197F",7
"lib2","SARS-CoV-2","AGTAAATTATAGCGAC",7,50.17,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","V11L A67D",2
"lib2","SARS-CoV-2","AGTAACAAGAAAAAAC",3,0.34,NA,NA,NA,NA,NA,NA,"stop","S41Y T100V Y121H Y175*",4
"lib2","SARS-CoV-2","AGTAACAAGCGGGGCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19G",1
"lib2","SARS-CoV-2","AGTAACAAGGCTTAGC",6,88.76,8.99,-1.85,0.07,2.82,1.1,0,">1 nonsynonymous","I2L N30C T170F",3
"lib2","SARS-CoV-2","AGTAACACGGCGGTAC",16,216.65,10.46,-0.37,0.04,2.94,1.05,0,">1 nonsynonymous","G9T N40R N120M",3
"lib2","SARS-CoV-2","AGTAACACTACCGGGC",1,0.59,NA,NA,NA,NA,NA,NA,"stop","K87* A105I W106L",3
"lib2","SARS-CoV-2","AGTAACAGTAACCCAT",5,205.39,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","I80G Q176M",2
"lib2","SARS-CoV-2","AGTAACAGTGAAACCG",7,38.29,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T63Q N92R Q144I",3
"lib2","SARS-CoV-2","AGTAACAGTGCGTGCC",10,111.28,9.82,-1.02,0.06,2.17,1.02,0,">1 nonsynonymous","A14L A89S",2
"lib2","SARS-CoV-2","AGTAACATAACAACAA",2,9.88,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","V180R",1
"lib2","SARS-CoV-2","AGTAACATACTAGACA",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Q G146I G174Q",3
"lib2","SARS-CoV-2","AGTAACCAAGGAACAT",3,29.28,6.22,-4.62,1.31,1.5,1.1,0.08,">1 nonsynonymous","R25L N107M N157Y",3
"lib2","SARS-CoV-2","AGTAACCCCTATAGCG",6,61.98,10.6,-0.24,0.05,2.83,1.06,0,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","AGTAACCCGTATATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N58* Q176R",2
"lib2","SARS-CoV-2","AGTAACCGTATCCATG",19,48.5,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","L5H R16M A33L V77S L111D L162F",6
"lib2","SARS-CoV-2","AGTAACCTATAACAGA",9,122.55,10.8,-0.04,0.06,2.93,1.09,0,">1 nonsynonymous","T15S V37F G83A C195F",4
"lib2","SARS-CoV-2","AGTAACCTGCTAGACC",5,1.76,NA,NA,NA,NA,NA,NA,"stop","F8S C49V Y66* R73T F167Y V181R K199V",7
"lib2","SARS-CoV-2","AGTAACGAAAACTAGT",1,17.05,10.21,-0.62,0.1,2.54,1.07,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","AGTAACGAAGATTAAT",6,114.02,10.81,-0.03,0.06,2.89,1.12,0,">1 nonsynonymous","C61R F160K",2
"lib2","SARS-CoV-2","AGTAACGAGTTGACTA",3,26.1,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","A14M V77T P133R K198V",4
"lib2","SARS-CoV-2","AGTAACGCAATAAAAC",1,82.26,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N64I P82S R124V",3
"lib2","SARS-CoV-2","AGTAACGCACGATCCT",5,27.01,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G86P Y121T",2
"lib2","SARS-CoV-2","AGTAACGCCTCTTGAA",5,34.1,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","L5E F70W D90A D98R W106L Y123S",6
"lib2","SARS-CoV-2","AGTAACGTATTTTAAA",10,71.77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G74S Y91T V173D",3
"lib2","SARS-CoV-2","AGTAACGTTCAAGTGA",5,27.44,9.58,-1.25,0.12,2,1.1,0.01,">1 nonsynonymous","L5R E10R S41M R136M",4
"lib2","SARS-CoV-2","AGTAACTAATATATCG",2,20.32,10.26,-0.58,0.07,2.96,1.07,0,">1 nonsynonymous","K87Y V180T",2
"lib2","SARS-CoV-2","AGTAACTACTTTACGT",10,68.43,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F134L T148F C158Y",3
"lib2","SARS-CoV-2","AGTAACTCATAAAAGA",7,3.36,NA,NA,NA,NA,NA,NA,"stop","S43A K87R G146*",3
"lib2","SARS-CoV-2","AGTAACTGGAGATTCC",10,100.16,8.4,-2.44,0.1,1.85,1.06,0,">1 nonsynonymous","F12L G74R N120A",3
"lib2","SARS-CoV-2","AGTAAGAAACATAAAA",4,155.28,10.11,-0.73,0.05,2.68,1.03,0,">1 nonsynonymous","N4P K56I E135D",3
"lib2","SARS-CoV-2","AGTAAGAACCACGGTT",1,21.77,10.97,0.13,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAGAACGATAATT",4,107.48,8.89,-1.94,0.06,2.8,1.05,0,">1 nonsynonymous","L122T G146V",2
"lib2","SARS-CoV-2","AGTAAGAACTAGGAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G L60K",2
"lib2","SARS-CoV-2","AGTAAGAAGTATTTAA",7,95.6,6.33,-4.51,0.31,1.5,1.13,0.01,">1 nonsynonymous","A14R L38T R73N",3
"lib2","SARS-CoV-2","AGTAAGACCCAAGTCG",7,14.44,8.37,-2.46,0.3,1.63,1.02,0.03,">1 nonsynonymous","P54F N107G K128F A192S",4
"lib2","SARS-CoV-2","AGTAAGACCTATGATT",5,82.27,9.58,-1.26,0.09,2.04,1.05,0,">1 nonsynonymous","F8S I138L",2
"lib2","SARS-CoV-2","AGTAAGACGACCAATG",1,98.98,10.75,-0.08,0.04,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAGACGTAGTAAG",3,58.42,10.78,-0.06,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAAGACTCAAATAC",2,2.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","AGTAAGAGAAGTCTAA",6,0.37,NA,NA,NA,NA,NA,NA,"stop","E10V D97* N107S",3
"lib2","SARS-CoV-2","AGTAAGATACAAAAAT",2,84.48,10.15,-0.68,0.06,2.5,1.06,0,"1 nonsynonymous","W106Q",1
"lib2","SARS-CoV-2","AGTAAGATAGGAGAGT",7,52.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3S S69W L95C W106T P149T T201W",6
"lib2","SARS-CoV-2","AGTAAGATAGGGTTTA",5,94.54,10.84,0.01,0.04,2.93,1.07,0,">1 nonsynonymous","V37L N64F",2
"lib2","SARS-CoV-2","AGTAAGATTCACGTTG",1,27.32,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","Y50V Y91A Q176N",3
"lib2","SARS-CoV-2","AGTAAGCAACCAAGAA",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69A I104Y G152F P191G",4
"lib2","SARS-CoV-2","AGTAAGCCCCTATGAG",3,48.07,10.83,0,0.07,2.91,1.11,0,"1 nonsynonymous","A42Q",1
"lib2","SARS-CoV-2","AGTAAGCCGATAAAAT",9,102.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50F G101C N118M T170F",4
"lib2","SARS-CoV-2","AGTAAGCGAATTGTTT",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V P149S",2
"lib2","SARS-CoV-2","AGTAAGCGAGCTAATA",1,0.59,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","AGTAAGCGCACGATAG",4,77.63,10.24,-0.59,0.05,2.74,1,0,"1 nonsynonymous","Y93F",1
"lib2","SARS-CoV-2","AGTAAGCGGGAAATTC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","V20* S41N A89C Q144S",4
"lib2","SARS-CoV-2","AGTAAGGCAAAAACTT",8,83.15,6,-4.84,1.13,1.5,1.14,0.01,">1 nonsynonymous","T3S F12Q N120P G155Q",4
"lib2","SARS-CoV-2","AGTAAGGCGCGAGATA",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D L122V S129G V173P",4
"lib2","SARS-CoV-2","AGTAAGGCTAATTCGT",1,23.06,10.24,-0.59,0.09,2.5,1,0.01,">1 nonsynonymous","C6S E10Q A42E Q163Y",4
"lib2","SARS-CoV-2","AGTAAGGTAACATTAG",4,13.76,7.46,-3.38,0.37,1.5,1.09,0.03,">1 nonsynonymous","C6R L38N K56A T140A",4
"lib2","SARS-CoV-2","AGTAAGGTAAGTGAAG",1,9.82,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","S41R D98F L111P Y165S",4
"lib2","SARS-CoV-2","AGTAAGGTACGCATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K S164T",2
"lib2","SARS-CoV-2","AGTAAGTAAGAATCTT",5,29.85,6.94,-3.9,0.41,1.91,1.19,0.03,">1 nonsynonymous","N4Y Y165V S184F",3
"lib2","SARS-CoV-2","AGTAAGTATAGCACAA",1,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V D98W V173S",3
"lib2","SARS-CoV-2","AGTAAGTCAATAAACA",1,27.65,7.48,-3.35,0.24,1.5,1.04,0.03,">1 nonsynonymous","R78P N118V Q176L",3
"lib2","SARS-CoV-2","AGTAAGTGCTGTTAAA",3,0.65,NA,NA,NA,NA,NA,NA,"stop","C49* R73C",2
"lib2","SARS-CoV-2","AGTAAGTTCCTGCTAT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23P D90K",2
"lib2","SARS-CoV-2","AGTAATAAACATAAGA",1,57.78,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N120G C158L",2
"lib2","SARS-CoV-2","AGTAATAAAGTAAACA",1,46.31,10.14,-0.69,0.06,2.93,1.07,0,">1 nonsynonymous","S53A N64I Q168N",3
"lib2","SARS-CoV-2","AGTAATAACAACAATT",1,2.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","AGTAATAACGCACCCT",2,29.98,9.39,-1.45,0.09,2.79,1.12,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","AGTAATAACGGTTGTC",2,10.47,7.87,-2.96,0.27,1.91,1.17,0.04,">1 nonsynonymous","G9F V37S F167L",3
"lib2","SARS-CoV-2","AGTAATAACTTAAGGA",9,270.95,9.94,-0.9,0.04,2.8,1.06,0,">1 nonsynonymous","T55C Y178T",2
"lib2","SARS-CoV-2","AGTAATAAGGTTTACC",6,98.62,9.78,-1.05,0.05,3,1,0,">1 nonsynonymous","N118G N151R",2
"lib2","SARS-CoV-2","AGTAATAATAATCATA",6,82.77,6,-4.84,1.35,1.5,1.17,0.01,">1 nonsynonymous","P7T D112Y T170S",3
"lib2","SARS-CoV-2","AGTAATAATATCTAGC",2,40.92,11.22,0.38,0.04,2.93,1.07,0,"1 nonsynonymous","Y123F",1
"lib2","SARS-CoV-2","AGTAATAATCATCACA",7,115.07,10.8,-0.04,0.05,2.89,1.08,0,"1 nonsynonymous","D90Q",1
"lib2","SARS-CoV-2","AGTAATAATGGTAAAA",4,74.28,9.24,-1.6,0.06,2.67,1.12,0,">1 nonsynonymous","S36K G74R",2
"lib2","SARS-CoV-2","AGTAATAATTACATCC",10,116.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I88N Y175V",2
"lib2","SARS-CoV-2","AGTAATACAACTGCTA",10,198.26,10.04,-0.79,0.05,2.68,1.03,0,">1 nonsynonymous","C6V L60H T201S",3
"lib2","SARS-CoV-2","AGTAATACACTTCGAA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","W106M P161*",2
"lib2","SARS-CoV-2","AGTAATACAGTGGTCT",2,2.68,NA,NA,NA,NA,NA,NA,"stop","G74* Q84F K199*",3
"lib2","SARS-CoV-2","AGTAATACGTAATAAA",2,35.87,10.66,-0.18,0.04,3,1,0,">1 nonsynonymous","D98V S129R T148K",3
"lib2","SARS-CoV-2","AGTAATACTGAATTGT",9,174.21,10.85,0.02,0.05,2.92,1.11,0,"1 nonsynonymous","T46H",1
"lib2","SARS-CoV-2","AGTAATACTTGATGAC",1,9.52,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","Q84W D112Q F167S T201L",4
"lib2","SARS-CoV-2","AGTAATAGAAAAAGAA",8,672.55,8.41,-2.43,0.09,2.68,1.02,0,"1 nonsynonymous","S113I",1
"lib2","SARS-CoV-2","AGTAATAGAATACTCT",3,17.03,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41W C102W E141G P161A E186V K198T",6
"lib2","SARS-CoV-2","AGTAATAGATAAACCC",4,24.67,7.21,-3.63,0.48,1.5,1.16,0.06,">1 nonsynonymous","C6R F12S A81R",3
"lib2","SARS-CoV-2","AGTAATAGCATGACGA",1,57.85,10.71,-0.13,0.04,3,1.03,0,">1 nonsynonymous","V37A S45E L60S",3
"lib2","SARS-CoV-2","AGTAATAGGTGTCTAA",4,72.71,10.62,-0.21,0.04,2.9,1.11,0,">1 nonsynonymous","V65A S129N",2
"lib2","SARS-CoV-2","AGTAATAGTACAGAAT",1,11.07,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G86W N120I",2
"lib2","SARS-CoV-2","AGTAATAGTTTCTCGA",2,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84S K94T G116T A145S A190E P197E",6
"lib2","SARS-CoV-2","AGTAATATACCCCATG",14,196.51,8.35,-2.49,0.14,2.53,1.07,0.01,">1 nonsynonymous","L57E G166R T201S",3
"lib2","SARS-CoV-2","AGTAATATAGAAGCGG",7,118.55,10.22,-0.62,0.02,2.87,1.04,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","AGTAATATATAATTAA",3,49.81,10.64,-0.19,0.04,2.98,1.05,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","AGTAATATATGAAGTA",1,37.4,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63L V182G",2
"lib2","SARS-CoV-2","AGTAATATGCCCTCAA",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L A105Y N151F C158L",4
"lib2","SARS-CoV-2","AGTAATATTGGTAACT",5,0,NA,NA,NA,NA,NA,NA,"stop","A14D V20M G83H I88*",4
"lib2","SARS-CoV-2","AGTAATCCATCCCGAC",1,21.75,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","L5W Y39E D59W A105L",4
"lib2","SARS-CoV-2","AGTAATCTTACATACA",8,54.91,6,-4.84,2,3,1.12,0,">1 nonsynonymous","E141G R179Y",2
"lib2","SARS-CoV-2","AGTAATGAACCGTAAA",4,51.01,10.5,-0.34,0.03,2.92,1.05,0,">1 nonsynonymous","N4Y D90R",2
"lib2","SARS-CoV-2","AGTAATGACTTGTTGT",7,93.83,8.94,-1.89,0.17,1.96,1.12,0.01,">1 nonsynonymous","E10R R73P L122T",3
"lib2","SARS-CoV-2","AGTAATGCCCAGTTAT",1,7.64,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","F44L D137P V173M",3
"lib2","SARS-CoV-2","AGTAATGCTGGACCTA",3,33.4,10.88,0.05,0.1,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAATGGATGGTACC",11,105.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4W P54L Y123T S139L V180W",5
"lib2","SARS-CoV-2","AGTAATGGGACGCCAA",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K V71P T148R",3
"lib2","SARS-CoV-2","AGTAATGTAACATAAG",1,8.05,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","K56S P177R S184M",3
"lib2","SARS-CoV-2","AGTAATGTAACTTCAC",4,110.19,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A89D Y159G G166A",3
"lib2","SARS-CoV-2","AGTAATGTACGGGGCC",3,1.07,NA,NA,NA,NA,NA,NA,"stop","Q79M P149*",2
"lib2","SARS-CoV-2","AGTAATGTGAAAATCA",1,37.95,10.26,-0.58,0.07,2.7,1.04,0,">1 nonsynonymous","K132M Y178Q",2
"lib2","SARS-CoV-2","AGTAATGTGCCCCAAG",11,209.1,9.83,-1.01,0.04,2.85,1.09,0,">1 nonsynonymous","A42T L57I N110S L125G",4
"lib2","SARS-CoV-2","AGTAATGTTACTAAAG",4,86.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18T S36I K48E V77D G83C R136W",6
"lib2","SARS-CoV-2","AGTAATGTTCTCTTTG",6,67.26,10.57,-0.26,0.03,2.9,1.04,0,"1 nonsynonymous","V71L",1
"lib2","SARS-CoV-2","AGTAATTAACCAGTGT",4,72.09,10.86,0.03,0.06,2.91,1.09,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","AGTAATTAGCGCGAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","F12A I142*",2
"lib2","SARS-CoV-2","AGTAATTCAACTCGCG",2,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T N58S A81C",3
"lib2","SARS-CoV-2","AGTAATTCGAACTGAG",4,8.27,NA,NA,NA,NA,NA,NA,"stop","S41W C61* C102F",3
"lib2","SARS-CoV-2","AGTAATTGAGAACCAA",15,195.34,10.74,-0.09,0.04,2.96,1.03,0,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","AGTAATTTAAAAGGAT",1,11.41,7.63,-3.2,0.44,1.7,1.29,0.08,">1 nonsynonymous","T3C C31K S69K N110L R136L N151L",6
"lib2","SARS-CoV-2","AGTACAAACACAGCTT",16,158.24,7.31,-3.53,0.3,1.5,1.12,0.03,">1 nonsynonymous","N58L S69W E135S",3
"lib2","SARS-CoV-2","AGTACAAACTAAATAC",6,138.9,9.4,-1.43,0.07,2.05,1.11,0,">1 nonsynonymous","S36T T55F A89V K114C",4
"lib2","SARS-CoV-2","AGTACAAACTAGACTA",1,49.65,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W23Q D112V Y123L E141V",4
"lib2","SARS-CoV-2","AGTACAAAGAATCTTC",3,11.5,6.39,-4.45,2,1.5,1.04,0,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","AGTACAAAGGAAATTG",2,6.95,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3I K56I P82L K87M V182A",5
"lib2","SARS-CoV-2","AGTACAAATGATGAAG",5,21.89,10.12,-0.71,0.12,2.4,1.01,0.01,">1 nonsynonymous","A14T S184R",2
"lib2","SARS-CoV-2","AGTACAAATTTCATCG",6,172.65,10.29,-0.54,0.03,2.78,1.09,0,">1 nonsynonymous","T85G D98I V173L",3
"lib2","SARS-CoV-2","AGTACAACCGCTTGCT",7,102.62,6.22,-4.61,0.51,1.5,1.12,0.01,">1 nonsynonymous","L5F Y21L G146P",3
"lib2","SARS-CoV-2","AGTACAACGCGAGGGT",4,4.42,NA,NA,NA,NA,NA,NA,"stop","D59R I80R Y119* R136*",4
"lib2","SARS-CoV-2","AGTACAAGACGCCAAC",1,14.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N92Y W106G V115S I142Q V153A",5
"lib2","SARS-CoV-2","AGTACAAGTATGATAG",1,8.94,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","I2A I72Q S113T",3
"lib2","SARS-CoV-2","AGTACAATCACATAGA",7,129.48,10.79,-0.04,0.03,2.91,1.09,0,"1 nonsynonymous","S147V",1
"lib2","SARS-CoV-2","AGTACAATCTCATCTT",3,25.54,10.17,-0.67,0.05,3,1.01,0,">1 nonsynonymous","F156M P191T",2
"lib2","SARS-CoV-2","AGTACAATGGTTAGCA",6,72.26,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30K G101D R124I P149I",4
"lib2","SARS-CoV-2","AGTACAATGTAACTAA",19,191.82,6.38,-4.45,0.4,1.5,1.13,0.01,">1 nonsynonymous","G146K Y159L",2
"lib2","SARS-CoV-2","AGTACAATGTTAATCA",8,171.29,8.88,-1.96,0.05,2.86,1.07,0,">1 nonsynonymous","L60R G117R",2
"lib2","SARS-CoV-2","AGTACACAAAATTGAA",1,87.29,10.69,-0.14,0.02,2.98,1.04,0,">1 nonsynonymous","S41T C61S",2
"lib2","SARS-CoV-2","AGTACACAAGCTACAC",6,86.3,7.83,-3.01,0.18,1.5,1.05,0.01,">1 nonsynonymous","S69E G174R",2
"lib2","SARS-CoV-2","AGTACACAAGTGCCAA",11,81.44,9.27,-1.57,0.12,1.64,1.15,0.01,">1 nonsynonymous","I2L D34S A89G",3
"lib2","SARS-CoV-2","AGTACACACAAAAGTT",12,195.03,10.8,-0.03,0.02,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACACAGACCTACA",1,8.8,10.75,-0.09,0.12,2.87,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGTACACCACAGCTAA",7,103.16,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C6L D112K S164H T170C Q176R",5
"lib2","SARS-CoV-2","AGTACACGAAATTTCC",8,118.32,10.3,-0.54,0.03,2.95,1.03,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","AGTACACGTGTTGTAA",4,35.93,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V77E I142H",2
"lib2","SARS-CoV-2","AGTACACTATACCTTG",1,5.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D F12T K56W D90L A105Q F126P",6
"lib2","SARS-CoV-2","AGTACACTTCAAAATA",4,107.24,10.8,-0.04,0.05,2.9,1.1,0,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","AGTACAGAAACAGGCC",16,213.84,10.19,-0.65,0.05,2.69,1.05,0,">1 nonsynonymous","L60G D90K V115L",3
"lib2","SARS-CoV-2","AGTACAGAATCTATCC",3,40.12,10.75,-0.08,0.11,2.79,1.11,0,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","AGTACAGGAAAGATTT",6,143.03,10.72,-0.12,0.03,2.9,1.12,0,">1 nonsynonymous","C61R L122F T201E",3
"lib2","SARS-CoV-2","AGTACAGGCATAACCA",4,60.14,9.93,-0.9,0.07,2.14,1.03,0,">1 nonsynonymous","I2G L38Q",2
"lib2","SARS-CoV-2","AGTACAGGTTATTTAT",2,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73E P149Q L162F",3
"lib2","SARS-CoV-2","AGTACAGTTGCATCCA",3,58.09,6.5,-4.34,0.34,1.5,1.17,0.01,">1 nonsynonymous","G152Y C158H",2
"lib2","SARS-CoV-2","AGTACATAGAATGTAA",15,198.64,10.83,0,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACATATCAAAACT",1,22.04,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A81G K94L W106G Y121C",4
"lib2","SARS-CoV-2","AGTACATCACACATTC",5,49.73,9.11,-1.73,0.39,1.5,1.11,0.05,"1 nonsynonymous","I28P",1
"lib2","SARS-CoV-2","AGTACATGTCGACTGA",4,31.74,9.98,-0.86,0.08,2.44,1.01,0,">1 nonsynonymous","V37G D90I",2
"lib2","SARS-CoV-2","AGTACATTCCTTTCTA",5,24.78,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","AGTACATTGGGCTAGG",4,55.13,9.16,-1.67,0.13,2.35,1.14,0.01,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","AGTACATTTCGCGGTA",1,9.44,9.63,-1.21,0.18,1.97,1.04,0.02,">1 nonsynonymous","Y39D K56S A105V",3
"lib2","SARS-CoV-2","AGTACCAAACTGGTTC",12,223.75,10.77,-0.07,0.03,2.98,1.04,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","AGTACCACCCAATACT",1,19.82,10.88,0.04,0.06,3,1,0,">1 nonsynonymous","F44W T201K",2
"lib2","SARS-CoV-2","AGTACCAGAATTGAAG",3,10.07,9.22,-1.62,0.52,1.5,1,0.07,">1 nonsynonymous","F47L K94F T201L",3
"lib2","SARS-CoV-2","AGTACCAGTAGCCATC",4,18.28,6,-4.84,2,3,1.26,0.02,"1 nonsynonymous","V180D",1
"lib2","SARS-CoV-2","AGTACCATAAGAAAGG",1,39.7,10.68,-0.16,0.06,2.98,1.05,0,">1 nonsynonymous","A22H Y35M L60I K198N S200I",5
"lib2","SARS-CoV-2","AGTACCATGCGTAGCC",19,87.28,6.47,-4.37,0.52,1.5,1.27,0.02,">1 nonsynonymous","A42M D68L",2
"lib2","SARS-CoV-2","AGTACCATTTACCTGA",14,129.74,9.74,-1.09,0.06,2.21,1.06,0,">1 nonsynonymous","A33F K114A L162N",3
"lib2","SARS-CoV-2","AGTACCCCACCGAGAT",2,40.72,10.85,0.01,0.06,2.84,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACCCGATTAAACT",3,66,10.24,-0.6,0.04,2.74,1.04,0,"1 nonsynonymous","L57G",1
"lib2","SARS-CoV-2","AGTACCCTATCCACAT",1,0.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2R",1
"lib2","SARS-CoV-2","AGTACCCTGAAAAGCA",6,113.24,6,-4.84,1.34,1.5,1.17,0.01,">1 nonsynonymous","E10V S36D A42E K56L N64V S139K G166Y K199D",8
"lib2","SARS-CoV-2","AGTACCCTTGCAAACA",3,46.08,9.02,-1.82,0.07,2.57,1.07,0,">1 nonsynonymous","D98C N109Y K198R",3
"lib2","SARS-CoV-2","AGTACCGGCTGGCTAG",1,0.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","AGTACCGGGTGTTGGG",2,1.62,NA,NA,NA,NA,NA,NA,"stop","E10L K56W E141* E154L G174E",5
"lib2","SARS-CoV-2","AGTACCTACACAACTT",7,11.23,6.16,-4.67,1.3,1.5,1.14,0.03,">1 nonsynonymous","I2G V103T Y165M",3
"lib2","SARS-CoV-2","AGTACCTGAAAGATAA",6,48.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P133R I142P N157Y",3
"lib2","SARS-CoV-2","AGTACCTGTTCACTGA",1,15.13,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","T3W S41T D59V N107L G155C",5
"lib2","SARS-CoV-2","AGTACCTTACATACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92A F156N",2
"lib2","SARS-CoV-2","AGTACCTTGAAGGTAT",2,4.33,NA,NA,NA,NA,NA,NA,"stop","Y50T G117*",2
"lib2","SARS-CoV-2","AGTACCTTGACCTAAA",6,84.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48N A81T G101T V173S",4
"lib2","SARS-CoV-2","AGTACGAACGGTTGTT",5,59.67,10.18,-0.66,0.06,2.48,1.01,0,">1 nonsynonymous","T3Q R136V G196R",3
"lib2","SARS-CoV-2","AGTACGAATAGTGATC",9,100.77,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12W L38P K87D D97L G166T L187K T201M",7
"lib2","SARS-CoV-2","AGTACGAATATAGGTT",1,15.04,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95T R136P",2
"lib2","SARS-CoV-2","AGTACGACAACGACCT",4,53.13,10.82,-0.01,0.07,2.83,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACGACAAGGGAGG",2,145.67,9.27,-1.57,0.08,2.4,1.06,0,">1 nonsynonymous","L38T F156H",2
"lib2","SARS-CoV-2","AGTACGACGTATTAAT",3,63.89,6.74,-4.09,0.27,1.5,1.13,0.01,">1 nonsynonymous","L5T T55Q Y91L I104F Y159C",5
"lib2","SARS-CoV-2","AGTACGATTCGCGCGG",1,11.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y39L R127I Q144S P149M",4
"lib2","SARS-CoV-2","AGTACGCAAACTCGCT",2,23.48,10.61,-0.23,0.07,2.88,1.04,0,">1 nonsynonymous","D98K S164Y",2
"lib2","SARS-CoV-2","AGTACGCACAGACTGC",11,157.06,10.87,0.03,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACGCCTACATACT",4,28.45,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F12L S45Q D59Y Y175E",4
"lib2","SARS-CoV-2","AGTACGCCTGATAATA",7,134.26,8.61,-2.23,0.1,3,1.05,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","AGTACGCGTACCCTTA",2,14.76,9.66,-1.18,0.14,2.37,1,0.01,">1 nonsynonymous","C6D S41E S139R",3
"lib2","SARS-CoV-2","AGTACGCTATCATAAA",5,20.87,8.86,-1.98,0.32,1.7,1.21,0.03,">1 nonsynonymous","T15Y S45F G83N",3
"lib2","SARS-CoV-2","AGTACGGATGACTATG",2,50.64,10.53,-0.31,0.05,2.92,1.08,0,"1 nonsynonymous","A22F",1
"lib2","SARS-CoV-2","AGTACGGCAACAAAGC",10,292.48,9.35,-1.49,0.03,2.9,1.08,0,">1 nonsynonymous","K56L Y143V",2
"lib2","SARS-CoV-2","AGTACGGCTAAGCAGG",2,16.45,6,-4.84,2,3,1.14,0.01,"1 nonsynonymous","R124I",1
"lib2","SARS-CoV-2","AGTACGGGAAAATCAA",2,53.47,6.98,-3.86,0.42,1.5,1.15,0.04,">1 nonsynonymous","R25G N40S",2
"lib2","SARS-CoV-2","AGTACGGGCAATGCGA",1,55.9,10.89,0.06,0.04,2.92,1.08,0,">1 nonsynonymous","T3V V37M",2
"lib2","SARS-CoV-2","AGTACGTTATTGAAAC",9,163.42,10.8,-0.04,0.05,2.94,1.08,0,">1 nonsynonymous","L5V V173Q",2
"lib2","SARS-CoV-2","AGTACGTTTAGTACTA",2,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M S41L D90I A190W",4
"lib2","SARS-CoV-2","AGTACTAAACCGATCT",6,78.73,10.82,-0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACTAACGCAATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* L95P",2
"lib2","SARS-CoV-2","AGTACTAACTAAACGT",15,128.69,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I28Q S41L P82K G101A S113M F126L",6
"lib2","SARS-CoV-2","AGTACTAAGCTTGGAA",5,169.08,10.1,-0.74,0.04,2.99,1.01,0,">1 nonsynonymous","F44S K56S K87V P149Y",4
"lib2","SARS-CoV-2","AGTACTAAGTAAGGAA",4,34.62,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L131W S139C",2
"lib2","SARS-CoV-2","AGTACTACAAAAATAT",16,165.61,10.83,0,0.06,2.86,1.14,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","AGTACTACATAGTCTA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E L60T G83Y A89C",4
"lib2","SARS-CoV-2","AGTACTACGAACTTCG",2,39.17,10.69,-0.14,0.05,2.98,1.01,0,">1 nonsynonymous","A81E T201G",2
"lib2","SARS-CoV-2","AGTACTAGATAACTCG",5,35.37,9.39,-1.45,0.14,1.75,1.11,0.01,">1 nonsynonymous","C61Y N107S I138L S147W",4
"lib2","SARS-CoV-2","AGTACTAGTGTAAACC",1,27.99,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I80F P177L",2
"lib2","SARS-CoV-2","AGTACTATAGGCATAC",5,41.44,6,-4.84,2,3,1.11,0,">1 nonsynonymous","Y93V Y119P S129V F156H",4
"lib2","SARS-CoV-2","AGTACTATGAGTAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* R16D F44* L57K E135L P149L",6
"lib2","SARS-CoV-2","AGTACTATGTGGTCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","I2G A14* R73L V103F Y119I I138H Q144K",7
"lib2","SARS-CoV-2","AGTACTCAAATCAACA",1,17.12,8.35,-2.49,0.14,3,1,0.01,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","AGTACTCACCTACAAT",1,10.37,8.13,-2.7,0.44,1.55,1.04,0.05,">1 nonsynonymous","C49F Y119T Q144D",3
"lib2","SARS-CoV-2","AGTACTCATAGACCAT",4,24.17,8.7,-2.14,0.27,1.5,1.19,0.04,">1 nonsynonymous","N1P N13V Y35G",3
"lib2","SARS-CoV-2","AGTACTCCAGTCGATA",10,227.86,10.07,-0.77,0.05,2.67,1.05,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","AGTACTCCCAATAAAC",10,183.6,10.8,-0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACTCCCACTCACA",3,75.01,10.27,-0.57,0.06,2.77,1.04,0,">1 nonsynonymous","S41C Y91N",2
"lib2","SARS-CoV-2","AGTACTCGGTATTAGA",9,160.15,9.13,-1.71,0.12,1.55,1.13,0.01,">1 nonsynonymous","A67G V173H",2
"lib2","SARS-CoV-2","AGTACTCTAAAGCTAA",13,1.28,NA,NA,NA,NA,NA,NA,"stop","C6F Y39L F44I P54* A89S",5
"lib2","SARS-CoV-2","AGTACTCTATTTCCGG",1,12.15,9.69,-1.15,0.23,2.11,1.01,0.02,">1 nonsynonymous","G9N G51W N64K",3
"lib2","SARS-CoV-2","AGTACTCTTCATGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A W106N Y123T T201I",4
"lib2","SARS-CoV-2","AGTACTCTTTCGCTAG",11,137.34,10.84,0,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACTGACGCAGCAA",5,36.72,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T46Q D59R N107L Y119V",4
"lib2","SARS-CoV-2","AGTACTGCAATAAGCG",4,77.5,10.89,0.05,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTACTGGATAACTAA",1,20.17,6,-4.84,2,3,1.11,0,">1 nonsynonymous","K56T L131R F160L",3
"lib2","SARS-CoV-2","AGTACTGGCAATTTAG",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L S45H I88N K94N Y123V K128S",6
"lib2","SARS-CoV-2","AGTACTGGGAAGAAAT",7,56.17,9.85,-0.99,0.13,2.07,1.11,0.01,"1 nonsynonymous","F17Q",1
"lib2","SARS-CoV-2","AGTACTGGTACACTGG",1,27.28,9.69,-1.15,0.11,2.52,1.1,0.01,">1 nonsynonymous","N40A N107R",2
"lib2","SARS-CoV-2","AGTACTGTACATGTTA",2,32.48,9.86,-0.98,0.11,2.38,1,0.01,">1 nonsynonymous","L5D A105F T201E",3
"lib2","SARS-CoV-2","AGTACTGTGACATGGA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","T55G G155T G172*",3
"lib2","SARS-CoV-2","AGTACTTACAAAATCG",7,0.91,NA,NA,NA,NA,NA,NA,"stop","S41L E76I N107L S184* T201L",5
"lib2","SARS-CoV-2","AGTACTTATAACAAAC",5,113.72,9.52,-1.32,0.09,2.4,1.06,0,">1 nonsynonymous","E10T A33Q D75V L122S",4
"lib2","SARS-CoV-2","AGTACTTGAACCTGAG",2,18.46,10.88,0.04,0.08,2.85,1.16,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","AGTACTTTTAAACAAC",7,87.25,8.46,-2.38,0.09,1.59,1.1,0,">1 nonsynonymous","A18M T85V I138K G155W",4
"lib2","SARS-CoV-2","AGTAGAAAAAAAACCA",2,5.11,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9I K48L D90K F126N Q176L R179S T201V",7
"lib2","SARS-CoV-2","AGTAGAAAACAACGGA",7,83.34,10.78,-0.06,0.05,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAGAACCTAGCTGT",2,6.88,10.11,-0.72,0.29,2.18,1,0.05,">1 nonsynonymous","S41R C61W E186L",3
"lib2","SARS-CoV-2","AGTAGAACCTCCCATG",7,57.72,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S45V A105P F156Q R179S",4
"lib2","SARS-CoV-2","AGTAGAAGACATGCAT",8,104.21,8.79,-2.04,0.04,2.81,1.09,0,">1 nonsynonymous","S113T I142V S184Y T201N",4
"lib2","SARS-CoV-2","AGTAGAAGATGTGCAG",3,34.9,6,-4.84,2,2.28,1.14,0,">1 nonsynonymous","N13F D90Y A105L N120C K128F",5
"lib2","SARS-CoV-2","AGTAGAAGCCCTCTGA",1,38.1,9.97,-0.87,0.14,2.33,1,0.01,">1 nonsynonymous","A22L Y35T",2
"lib2","SARS-CoV-2","AGTAGAAGCGTAAATA",4,41.39,8.43,-2.41,0.12,2.25,1.12,0.01,">1 nonsynonymous","P133H A145L P197T",3
"lib2","SARS-CoV-2","AGTAGAATTTTATGAC",2,23.32,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44L D68W L122D",3
"lib2","SARS-CoV-2","AGTAGACACGTCAATA",9,23.8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13V T55P W106K S113R",4
"lib2","SARS-CoV-2","AGTAGACAGTGCCCAC",3,59.58,7.76,-3.08,0.2,1.5,1.14,0.01,">1 nonsynonymous","K87S Y121A P149C",3
"lib2","SARS-CoV-2","AGTAGACCGGATCCTC",1,18.56,9.42,-1.41,0.18,1.89,1.11,0.01,">1 nonsynonymous","A33E D98L T201D",3
"lib2","SARS-CoV-2","AGTAGACGTTTCCCCA",12,211.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112N S184I",2
"lib2","SARS-CoV-2","AGTAGACTTCACCTAA",1,11.06,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","R25V F99S Q163Y",3
"lib2","SARS-CoV-2","AGTAGAGAGGAGTATT",3,28.9,8.88,-1.96,0.07,2.47,1,0,">1 nonsynonymous","G9Y P161N",2
"lib2","SARS-CoV-2","AGTAGAGGAAGGATTA",4,27.13,10.89,0.05,0.06,2.97,1.04,0,"1 nonsynonymous","P197V",1
"lib2","SARS-CoV-2","AGTAGAGGACACCTGA",1,37.28,10.18,-0.65,0.07,2.88,1.02,0,">1 nonsynonymous","E10T R27Y G83R",3
"lib2","SARS-CoV-2","AGTAGAGTAGAGAATT",5,44.63,9.62,-1.22,0.05,2.84,1,0,">1 nonsynonymous","Y39D L60K Y121L",3
"lib2","SARS-CoV-2","AGTAGAGTCCTTTAGG",8,12.15,NA,NA,NA,NA,NA,NA,"stop","V52G Q163*",2
"lib2","SARS-CoV-2","AGTAGAGTCTCGCTCG",2,16.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A33G R73A G83V L95K I104Y I138N",6
"lib2","SARS-CoV-2","AGTAGATAAGTTATAG",6,3.16,NA,NA,NA,NA,NA,NA,"stop","A42S W106R P133C N151A G155*",5
"lib2","SARS-CoV-2","AGTAGATTCCATCTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34* V173S",2
"lib2","SARS-CoV-2","AGTAGCAAAAGGCGGG",2,52.69,10.9,0.07,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAGCAAGGAGATTG",9,44.71,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","T46S T63G I72E Y93E",4
"lib2","SARS-CoV-2","AGTAGCAAGTGCTGAA",3,70.95,10.77,-0.07,0.04,2.92,1.09,0,"1 nonsynonymous","L5N",1
"lib2","SARS-CoV-2","AGTAGCAAGTGTTGAG",3,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M I28T",2
"lib2","SARS-CoV-2","AGTAGCACACGCGGTG",2,62.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15S T63M T100A S113P S129G Y159S",6
"lib2","SARS-CoV-2","AGTAGCACATTTCAAT",5,60.48,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y21D N64T A145P N157R T201G",5
"lib2","SARS-CoV-2","AGTAGCACGCTCACGT",19,204.73,9.59,-1.25,0.05,1.93,1.06,0,">1 nonsynonymous","D97V C102F T201L",3
"lib2","SARS-CoV-2","AGTAGCAGGAGGTTAC",7,119.29,10.8,-0.03,0.05,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTAGCATCAGAATCC",6,88.58,10.34,-0.5,0.02,2.85,1.07,0,">1 nonsynonymous","L5R D97W F160G",3
"lib2","SARS-CoV-2","AGTAGCATGCAAATCA",4,47.44,10.7,-0.14,0.06,2.7,1.31,0,"1 nonsynonymous","G152R",1
"lib2","SARS-CoV-2","AGTAGCCATAACGAAT",10,74.66,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34R C49L L57W E141R",4
"lib2","SARS-CoV-2","AGTAGCCTCAGCACTA",4,54.81,10.6,-0.24,0.08,2.82,1.12,0,">1 nonsynonymous","V32A S129R",2
"lib2","SARS-CoV-2","AGTAGCCTTCAGAACC",10,8.74,NA,NA,NA,NA,NA,NA,"stop","V20K D34I Y91C G101R S129C F156*",6
"lib2","SARS-CoV-2","AGTAGCGTATAACGTA",4,100.04,9.63,-1.21,0.07,2.45,1.02,0,">1 nonsynonymous","I2F Y121R",2
"lib2","SARS-CoV-2","AGTAGCTAATGTATCT",14,31.57,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","D90P Y119L",2
"lib2","SARS-CoV-2","AGTAGCTACTATCGGT",3,195.28,10.69,-0.15,0.02,2.97,1,0,">1 nonsynonymous","D97Y P149N",2
"lib2","SARS-CoV-2","AGTAGCTGACTGTACA",8,52.99,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y91F Y143P G152N L162T",4
"lib2","SARS-CoV-2","AGTAGGAGCAACAAAA",2,15.54,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C6V V37G I72D E141V",4
"lib2","SARS-CoV-2","AGTAGGATATTATAGG",13,89.6,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","N40K I80Q F99N N118D G155Y T193Y V194G",7
"lib2","SARS-CoV-2","AGTAGGCCGGATTGAA",4,50.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2W F17E F167D T201S",4
"lib2","SARS-CoV-2","AGTAGGTAAGATTTCA",3,16.4,6.54,-4.3,0.28,1.5,1.06,0.01,">1 nonsynonymous","R124M N157W V173T",3
"lib2","SARS-CoV-2","AGTAGGTAGATCTTTG",7,80.79,9.29,-1.55,0.04,2.92,1.1,0,">1 nonsynonymous","Q168L P197R",2
"lib2","SARS-CoV-2","AGTAGTAAAATAAAGT",1,11.25,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","I2K C6L G83W A105D P161Y",5
"lib2","SARS-CoV-2","AGTAGTAACATAGTCA",1,71.68,10.08,-0.76,0.07,2.8,1.05,0,"1 nonsynonymous","Y123N",1
"lib2","SARS-CoV-2","AGTAGTAATCTCACCG",6,163.5,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","P7L A18R R25N F44W G86Y G174V",6
"lib2","SARS-CoV-2","AGTAGTAGAAATACCT",8,64.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84F S113L Y159L",3
"lib2","SARS-CoV-2","AGTAGTAGGTTTTGGT",5,15.31,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G86S D98L G172R",3
"lib2","SARS-CoV-2","AGTAGTCACTTATGAT",3,11.67,6.69,-4.15,0.52,2.8,1.28,0.05,">1 nonsynonymous","V32L L57R L95S V103C",4
"lib2","SARS-CoV-2","AGTAGTCAGTAGGATC",14,1.01,NA,NA,NA,NA,NA,NA,"stop","V37* D90A N151*",3
"lib2","SARS-CoV-2","AGTAGTCCCAGATAAG",2,27.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M Y39V",2
"lib2","SARS-CoV-2","AGTAGTCTAACAAAAA",2,30.71,10.5,-0.34,0.06,2.97,1.03,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","AGTAGTGAAAATAAAT",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8N",1
"lib2","SARS-CoV-2","AGTAGTGAATACTGTA",9,72.82,10.34,-0.5,0.04,2.87,1.1,0,">1 nonsynonymous","C6T V32Q",2
"lib2","SARS-CoV-2","AGTAGTGCAAATGAGC",1,77.89,10.85,0.01,0.07,2.94,1.09,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","AGTAGTGCTTAATAAG",2,5.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50M D90M",2
"lib2","SARS-CoV-2","AGTAGTTATAATTGAC",8,153.96,10.79,-0.05,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTAGTTGACACAATA",3,7.21,11.11,0.27,0.06,3,1,0,">1 nonsynonymous","V37N Q168Y",2
"lib2","SARS-CoV-2","AGTAGTTTAAAGTAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","AGTATAAAAAAATCCC",4,50,10.88,0.05,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTATAAACAAATCAT",17,100.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T63M T85G D112P P133S G155T",5
"lib2","SARS-CoV-2","AGTATAAACCACGATC",3,85.31,8.51,-2.32,0.08,2.17,1.08,0,">1 nonsynonymous","I2E N13I K87R F126M K199M",5
"lib2","SARS-CoV-2","AGTATAAACTTAATCC",3,70.65,9.68,-1.16,0.1,2,1.09,0.01,"1 nonsynonymous","W23S",1
"lib2","SARS-CoV-2","AGTATAAAGTACTTGC",6,79.75,9.48,-1.35,0.08,1.97,1.01,0,">1 nonsynonymous","N40I G51K G83K",3
"lib2","SARS-CoV-2","AGTATAAAGTTATCAT",8,144.53,10.63,-0.21,0.04,2.93,1.04,0,">1 nonsynonymous","P149A E154N",2
"lib2","SARS-CoV-2","AGTATAAATAAGTAAT",1,156.05,10.15,-0.69,0.04,2.78,1.01,0,">1 nonsynonymous","D90H N151F A192E",3
"lib2","SARS-CoV-2","AGTATAACCTAAACCA",6,50.25,9.83,-1,0.1,2.01,1.03,0,">1 nonsynonymous","Y39L T55I W106V",3
"lib2","SARS-CoV-2","AGTATAACGAGAAAAT",5,112.12,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T55W A105V E154A G172W",4
"lib2","SARS-CoV-2","AGTATAACGATCTTAA",5,124.82,9.87,-0.97,0.04,2.89,1.04,0,">1 nonsynonymous","K56L D90S Q168N",3
"lib2","SARS-CoV-2","AGTATAACTAGAATAA",4,8.35,9.91,-0.93,0.34,2.76,1.02,0.01,">1 nonsynonymous","S19A E141R",2
"lib2","SARS-CoV-2","AGTATAACTATATGAA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19I S41L K56R Y91S",4
"lib2","SARS-CoV-2","AGTATAAGTAATAGAT",2,111.42,10.54,-0.3,0.05,2.87,1.08,0,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","AGTATAATAAAGATTG",3,154.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N107H L111E N120Y E154S Q176L",5
"lib2","SARS-CoV-2","AGTATAATATAAAGTA",3,51.64,10.78,-0.06,0.05,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTATAATCAATCACC",3,37.39,10.39,-0.44,0.06,2.93,1,0,">1 nonsynonymous","C61V A89C",2
"lib2","SARS-CoV-2","AGTATACAAAAACTAA",2,13.07,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G9N Y50F G83M I104F R127V",5
"lib2","SARS-CoV-2","AGTATACACAGATGAA",2,17.09,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V11G I80S N157C",3
"lib2","SARS-CoV-2","AGTATACACCGAGACA",3,41.43,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N30R D68G F156G",3
"lib2","SARS-CoV-2","AGTATACATATATGGC",17,339.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4H V37L P82S E135F G155H P177C",6
"lib2","SARS-CoV-2","AGTATACATGAGCGAA",2,21.45,9.03,-1.81,0.14,1.7,1.07,0.01,">1 nonsynonymous","L60S V77T G155A",3
"lib2","SARS-CoV-2","AGTATACATTCCCGAA",2,25.02,6,-4.84,2,2.35,1.09,0,">1 nonsynonymous","S29F S69E V77K",3
"lib2","SARS-CoV-2","AGTATACCCAGATATT",8,51.91,9.19,-1.64,0.09,1.93,1.17,0,">1 nonsynonymous","P7S I88T",2
"lib2","SARS-CoV-2","AGTATACCCTACAAGG",13,77.94,9.98,-0.86,0.08,2.39,1,0,"1 nonsynonymous","V181L",1
"lib2","SARS-CoV-2","AGTATACTACCTGATT",12,99.62,10.77,-0.07,0.07,2.79,1.16,0,">1 nonsynonymous","Y39S F160R",2
"lib2","SARS-CoV-2","AGTATAGACTAAGTAA",5,6.77,10.02,-0.82,0.23,2.16,1.08,0.02,">1 nonsynonymous","N107G P149F",2
"lib2","SARS-CoV-2","AGTATAGCAACGACTA",2,21.06,7.99,-2.85,0.29,1.5,1.08,0.04,">1 nonsynonymous","V65R Y91I E154C S200Y",4
"lib2","SARS-CoV-2","AGTATAGCCAAATACT",8,131.96,7.91,-2.92,0.21,1.5,1.05,0.02,">1 nonsynonymous","T15V Q176T",2
"lib2","SARS-CoV-2","AGTATAGGATTCAGTT",2,104.07,10.46,-0.37,0.03,2.9,1.05,0,">1 nonsynonymous","Y178L K198N",2
"lib2","SARS-CoV-2","AGTATAGGCTTGGGTT",12,191.64,10.7,-0.14,0.04,2.94,1.07,0,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","AGTATAGTAAGGAAAT",9,121.36,10.74,-0.1,0.03,2.92,1.1,0,"1 nonsynonymous","I138D",1
"lib2","SARS-CoV-2","AGTATAGTGATCTCCA",2,482.38,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S36A G166I Y175L",3
"lib2","SARS-CoV-2","AGTATAGTTTTGCCGC",6,98.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T46Y P54R N64V G172W",4
"lib2","SARS-CoV-2","AGTATATAACTCTTTC",8,1.47,NA,NA,NA,NA,NA,NA,"stop","S36E C61V D112*",3
"lib2","SARS-CoV-2","AGTATATAAGAAAACA",10,26.11,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","L5A V20G A105L D137T",4
"lib2","SARS-CoV-2","AGTATATAGAAATGGT",7,64.96,9.73,-1.1,0.06,1.99,1.06,0,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","AGTATATAGCTTGGCC",2,49.5,10.65,-0.18,0.02,2.96,1.05,0,">1 nonsynonymous","V52I Y123V",2
"lib2","SARS-CoV-2","AGTATATATCTAACAA",6,82.46,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","V71P",1
"lib2","SARS-CoV-2","AGTATATATTGAACGC",4,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V Y50N Y123M A190N",4
"lib2","SARS-CoV-2","AGTATATCAACAATTA",3,0.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","AGTATATCCGAGTGTA",11,96.64,8.68,-2.16,0.12,1.95,1.13,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","AGTATATCCTCAAAGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y L60E D98F L122R P161R F167S Y175L V182I",8
"lib2","SARS-CoV-2","AGTATATCTAACGAAA",5,43.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L122S Q144R V182L",3
"lib2","SARS-CoV-2","AGTATATCTGAGGAAG",4,85.88,10.84,0,0.04,2.94,1.07,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","AGTATCACCCTTTCAT",1,12.9,9.81,-1.03,0.2,2,1.05,0.01,">1 nonsynonymous","F44S Y121H K132F",3
"lib2","SARS-CoV-2","AGTATCACGAAATTAA",6,93.26,10.73,-0.11,0.05,2.95,1.07,0,">1 nonsynonymous","S36A T100C K198Y",3
"lib2","SARS-CoV-2","AGTATCAGCGAATGAT",1,6.08,9.97,-0.86,0.22,2.32,1,0.02,">1 nonsynonymous","L60R Y119K",2
"lib2","SARS-CoV-2","AGTATCAGTAATTAAA",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73P Y121P",2
"lib2","SARS-CoV-2","AGTATCATGGTACCCA",9,138.85,7.5,-3.34,0.26,1.5,1.1,0.02,">1 nonsynonymous","G9C R16G Y35G S69L",4
"lib2","SARS-CoV-2","AGTATCATGTGTGAGG",1,37.38,9.83,-1.01,0.09,2.79,1.04,0,">1 nonsynonymous","K128G G155T S164G T201V",4
"lib2","SARS-CoV-2","AGTATCATTACGACAC",10,80.55,9.21,-1.63,0.06,1.86,1.08,0,">1 nonsynonymous","I28V T63W Q144H",3
"lib2","SARS-CoV-2","AGTATCATTTCACATA",24,5.63,8.53,-2.31,0.33,2.63,1.17,0.03,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","AGTATCCAACGAAGTG",3,25.59,6.99,-3.84,0.44,1.5,1.05,0.07,">1 nonsynonymous","Y50S R127N",2
"lib2","SARS-CoV-2","AGTATCCAGTCATTGC",4,22.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23M F44V D112N",3
"lib2","SARS-CoV-2","AGTATCCCTAATTGCC",1,35.9,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","Y35H D90S Y121K",3
"lib2","SARS-CoV-2","AGTATCCGCCACCGCC",8,2.83,NA,NA,NA,NA,NA,NA,"stop","N13M F47P G51Y C61Y S113* E135*",6
"lib2","SARS-CoV-2","AGTATCCTAAAGTTAA",3,19.67,10.74,-0.1,0.09,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTATCCTAACACATT",14,100.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F47K V65L N92L F156L",4
"lib2","SARS-CoV-2","AGTATCGAATTAATAA",24,240.65,8.4,-2.44,0.13,2.5,1.05,0.01,">1 nonsynonymous","V37A K56H G146L",3
"lib2","SARS-CoV-2","AGTATCGACATATAAA",3,121.17,10.9,0.06,0.05,2.97,1.04,0,">1 nonsynonymous","A190E K198Y",2
"lib2","SARS-CoV-2","AGTATCGCAGCACTGA",8,132.89,9.41,-1.42,0.03,2.8,1.07,0,">1 nonsynonymous","N64Y N109S",2
"lib2","SARS-CoV-2","AGTATCGCCTCCTAGA",4,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L D112Y",2
"lib2","SARS-CoV-2","AGTATCGGCACTGCTT",6,93.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38R L60T P96D K128L",4
"lib2","SARS-CoV-2","AGTATCGGGCCATTAT",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P G155F",2
"lib2","SARS-CoV-2","AGTATCTACACAAATT",6,69.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11H D68F",2
"lib2","SARS-CoV-2","AGTATCTACGACAAAC",3,33.26,10.75,-0.08,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTATCTAGAGTCTGA",10,213.11,7.71,-3.13,0.1,2.38,1.09,0,">1 nonsynonymous","Q84M Y175D T201M",3
"lib2","SARS-CoV-2","AGTATCTATGAAGAAT",2,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K V77E P82S I88H P149I N171P",6
"lib2","SARS-CoV-2","AGTATCTGACAACCTC",2,107.95,8.9,-1.94,0.04,2.97,1.04,0,">1 nonsynonymous","I2T G166L",2
"lib2","SARS-CoV-2","AGTATCTTTAGCACAG",3,97.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E135P F160H G166W",3
"lib2","SARS-CoV-2","AGTATGAAAAAAGATG",1,23.01,8.38,-2.45,0.13,2.54,1.09,0.01,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","AGTATGAAACCTTACA",1,11.88,9.25,-1.59,0.17,1.53,1.06,0.02,">1 nonsynonymous","A18T L38S",2
"lib2","SARS-CoV-2","AGTATGAATTCTAAAC",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22H F62W W106N",3
"lib2","SARS-CoV-2","AGTATGACACGCACAA",7,38.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5C I28Y Y39L F44I D90H V103N N107I Q168E R179T",9
"lib2","SARS-CoV-2","AGTATGACTAAGCTAT",2,13.24,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","K56A D98E P149R V182R",4
"lib2","SARS-CoV-2","AGTATGAGAAGCCTAT",2,54.2,6,-4.84,2,3,1.14,0,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","AGTATGAGTAGTTTAA",11,1.02,NA,NA,NA,NA,NA,NA,"stop","E10Y K26E A42E Y91*",4
"lib2","SARS-CoV-2","AGTATGATACGATTTT",2,24.18,10.87,0.03,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTATGATACGTGCCG",9,161.17,9.82,-1.01,0.08,2.19,1.01,0,">1 nonsynonymous","R27M A105V A192T",3
"lib2","SARS-CoV-2","AGTATGATCAAAACGT",9,46.37,6.12,-4.71,0.53,3,1.28,0.01,">1 nonsynonymous","A33P Y123G I138S",3
"lib2","SARS-CoV-2","AGTATGATTTTACGTA",3,62.68,10.8,-0.04,0.07,2.87,1.11,0,"1 nonsynonymous","L60A",1
"lib2","SARS-CoV-2","AGTATGCAAATCCAAT",1,12,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V103F N118V E141A F156W G166I",5
"lib2","SARS-CoV-2","AGTATGCAATCTATCT",15,131.87,6,-4.84,2,1.5,1.17,0,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","AGTATGCAGCGACTAG",5,25.08,10.78,-0.06,0.07,2.97,1.06,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","AGTATGCAGTTAACGT",3,32.26,10.31,-0.53,0.09,2.85,1.09,0,">1 nonsynonymous","G83Y T100S",2
"lib2","SARS-CoV-2","AGTATGCCATACGTAG",5,121.62,8.32,-2.51,0.16,1.75,1.09,0.01,">1 nonsynonymous","G116M N130C N157T T201H",4
"lib2","SARS-CoV-2","AGTATGCCGTCATATT",8,169.43,10.09,-0.75,0.05,2.93,1.06,0,">1 nonsynonymous","T85N G155D G196R",3
"lib2","SARS-CoV-2","AGTATGCTCCAAAGAG",3,16.9,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T63M S69M A81L F99W",4
"lib2","SARS-CoV-2","AGTATGGCTGGGTCGG",6,13.79,9.19,-1.64,0.08,2.94,1.08,0,">1 nonsynonymous","Y119L I142V",2
"lib2","SARS-CoV-2","AGTATGGTAAATGAAC",5,13.98,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","I88C K94G V103M Y119N P161R Q168H",6
"lib2","SARS-CoV-2","AGTATGGTCGCATGCA",8,37.17,6,-4.84,2,3,1.18,0,">1 nonsynonymous","I2C V20R N58F Y165A",4
"lib2","SARS-CoV-2","AGTATGGTGAAAAGAG",5,46.66,10.04,-0.79,0.06,2.98,1.03,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","AGTATGTAATTCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D G152D C158E G166K T201Q",5
"lib2","SARS-CoV-2","AGTATGTAGTCTAATA",9,3.34,NA,NA,NA,NA,NA,NA,"stop","L95* T148S P161R G174S",4
"lib2","SARS-CoV-2","AGTATGTATGACCTAT",5,107.19,9.82,-1.01,0.02,2.99,1.01,0,"1 nonsynonymous","N118G",1
"lib2","SARS-CoV-2","AGTATGTGAACATATC",8,96.38,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","A14V Y35E P96L H189A",4
"lib2","SARS-CoV-2","AGTATGTTAAGCTAAA",1,17.77,10.66,-0.18,0.13,2.69,1.35,0.01,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","AGTATGTTCCTCCGGC",2,33.33,8.65,-2.18,0.11,2.95,1.13,0.01,">1 nonsynonymous","L60S F126T K199I",3
"lib2","SARS-CoV-2","AGTATTAACGACAGAC",1,83.03,10.25,-0.59,0.07,2.74,1.05,0,"1 nonsynonymous","Y178I",1
"lib2","SARS-CoV-2","AGTATTAAGTGTGTTT",3,3.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34H",1
"lib2","SARS-CoV-2","AGTATTACTCCCATTT",2,38.34,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","S45P K94V N118P I138A",4
"lib2","SARS-CoV-2","AGTATTATCACTGAAA",11,158.45,6,-4.84,1.64,3,1.22,0,">1 nonsynonymous","A145N C150M",2
"lib2","SARS-CoV-2","AGTATTATGCTATCAG",14,35.77,7.5,-3.33,0.47,1.5,1.07,0.07,">1 nonsynonymous","A33F F47D N92K F126E",4
"lib2","SARS-CoV-2","AGTATTCAAGGGGGAT",9,5.17,NA,NA,NA,NA,NA,NA,"stop","T15W T55Y S164*",3
"lib2","SARS-CoV-2","AGTATTCACTCGCAAG",8,14.36,NA,NA,NA,NA,NA,NA,"stop","I2Y W23* L60M D90F A192W",5
"lib2","SARS-CoV-2","AGTATTCAGTAAAATA",1,29.83,9.58,-1.26,0.08,2.06,1.04,0,">1 nonsynonymous","N13C R27Y K56R",3
"lib2","SARS-CoV-2","AGTATTCATAAACTTC",2,23.21,10.82,-0.01,0.07,3,1.04,0,"1 nonsynonymous","G196V",1
"lib2","SARS-CoV-2","AGTATTCCACCTAATT",1,6.64,NA,NA,NA,NA,NA,NA,"stop","E10* D34M T170C",3
"lib2","SARS-CoV-2","AGTATTCCACTGAAAT",5,38.53,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L95G N107S G116S F126P T170L",5
"lib2","SARS-CoV-2","AGTATTCTAATAGAAA",1,0.8,NA,NA,NA,NA,NA,NA,"stop","T55* A89C P149S C158* G166A Y178V",6
"lib2","SARS-CoV-2","AGTATTGAAATCATCA",7,20.16,6,-4.84,2,1.68,1.23,0.01,">1 nonsynonymous","S43R Y50S T55V R124S S139Q",5
"lib2","SARS-CoV-2","AGTATTGAATCATTTT",12,84.3,8.61,-2.22,0.09,1.58,1.09,0,">1 nonsynonymous","A33E N92S",2
"lib2","SARS-CoV-2","AGTATTGATCCGAGAC",8,117.76,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31V T55F P82H S147Y",4
"lib2","SARS-CoV-2","AGTATTGCAGAAAAGG",6,104.13,9.47,-1.37,0.05,2.69,1.07,0,">1 nonsynonymous","N107K N120R",2
"lib2","SARS-CoV-2","AGTATTGGTGATACTG",1,10.55,9.1,-1.73,0.41,1.5,1,0.07,">1 nonsynonymous","A42V I72S S164P",3
"lib2","SARS-CoV-2","AGTATTTAAAACCTAA",6,10.64,6,-4.84,2,3,1,0,">1 nonsynonymous","C6S N13V F99S G146K",4
"lib2","SARS-CoV-2","AGTATTTAGAAAAATA",9,3.01,NA,NA,NA,NA,NA,NA,"stop","F99* Y119G",2
"lib2","SARS-CoV-2","AGTATTTCAAGCAACA",3,11.72,6,-4.84,0.71,3,1.16,0.01,">1 nonsynonymous","C61V D98V I104H I142R G155R S200V",6
"lib2","SARS-CoV-2","AGTATTTCCTTACTAG",3,69.02,10.48,-0.35,0.06,2.98,1.02,0,"1 nonsynonymous","N13H",1
"lib2","SARS-CoV-2","AGTATTTCGCACTATT",1,13.07,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","K48M P82W K94T K132A",4
"lib2","SARS-CoV-2","AGTATTTTAAACATAT",8,40.32,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S45I D68S T140R",3
"lib2","SARS-CoV-2","AGTCAAAAATCAAATC",3,127.04,6,-4.84,1.27,1.5,1.12,0.01,">1 nonsynonymous","R27K K87M F126E C158V",4
"lib2","SARS-CoV-2","AGTCAAAAATTTAAAG",1,34.28,11.01,0.17,0.05,2.93,1.08,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","AGTCAAAATTTAACGT",4,71.45,9.89,-0.94,0.06,2.7,1.04,0,">1 nonsynonymous","T55M D75E A89C",3
"lib2","SARS-CoV-2","AGTCAAAATTTTGACT",2,37.53,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C6A T63L A89T T140S N157T",5
"lib2","SARS-CoV-2","AGTCAAAATTTTTGAC",7,119.84,10.85,0.01,0.05,2.92,1.1,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","AGTCAAACACCTACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41N L60* K128L",3
"lib2","SARS-CoV-2","AGTCAAACAGACCATA",7,53.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S53M Y93N",2
"lib2","SARS-CoV-2","AGTCAAAGCACAGTCC",2,13.61,10.73,-0.1,0.08,2.91,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTCAAAGCACTCACA",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88K P169M K198L",3
"lib2","SARS-CoV-2","AGTCAAATAGCAAACC",3,71.31,10.19,-0.65,0.07,2.87,1.07,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","AGTCAAATATGAGAAG",7,10.08,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F99S I104D K128P A190N",4
"lib2","SARS-CoV-2","AGTCAAATTAACAAAC",3,46.77,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P54N G101R L125K S147H",4
"lib2","SARS-CoV-2","AGTCAACAGCTACCTC",4,49.79,10.77,-0.06,0.06,2.86,1.07,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","AGTCAACATAAGGGAC",6,65.51,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","A14C L95R",2
"lib2","SARS-CoV-2","AGTCAACATTACCGAA",3,14.69,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L38Q D98K E141F V153D G174P",5
"lib2","SARS-CoV-2","AGTCAACATTGATTTA",2,14.61,9.84,-0.99,0.09,2.27,1,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","AGTCAACCAAGACTGA",6,73.66,10.69,-0.14,0.07,2.93,1.09,0,">1 nonsynonymous","V37A P191L K198R",3
"lib2","SARS-CoV-2","AGTCAAGTATCCTATC",2,175.03,10.92,0.08,0.05,2.94,1.08,0,">1 nonsynonymous","V37F L122M",2
"lib2","SARS-CoV-2","AGTCAAGTGATGGCCA",2,75.19,10.85,0.02,0.03,2.95,1.04,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","AGTCAAGTGTATATTT",19,172.67,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S36T G86L N157V",3
"lib2","SARS-CoV-2","AGTCAAGTTTTCCTAA",7,37.72,9.58,-1.25,0.18,1.68,1.11,0.01,"1 nonsynonymous","G86A",1
"lib2","SARS-CoV-2","AGTCAATAGTAGTACC",1,0.62,NA,NA,NA,NA,NA,NA,"stop","N13F C61* V77G Y121P",4
"lib2","SARS-CoV-2","AGTCAATCAAACAAAC",1,8.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","AGTCAATCTATTATAA",12,441.21,10.66,-0.18,0.03,2.85,1.09,0,"1 nonsynonymous","Y178N",1
"lib2","SARS-CoV-2","AGTCAATGAGCTATAA",7,33.64,9.33,-1.51,0.1,2.3,1.03,0,">1 nonsynonymous","Y35P N107P S129G",3
"lib2","SARS-CoV-2","AGTCACAACCAAGCCC",1,25.78,10.83,0,0.06,3,1,0,">1 nonsynonymous","D90K D98N",2
"lib2","SARS-CoV-2","AGTCACAACTTGGACC",6,2.24,NA,NA,NA,NA,NA,NA,"stop","S41T V71E K87R G116K G166* V182N",6
"lib2","SARS-CoV-2","AGTCACAAGCACAACA",11,177.63,9.57,-1.26,0.08,2.44,1.05,0,">1 nonsynonymous","C61L Y91V E154V Q168F",4
"lib2","SARS-CoV-2","AGTCACACAGGTCATG",7,87.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37I K48P K94C A105E",4
"lib2","SARS-CoV-2","AGTCACACGACGAGAG",13,108.79,10.74,-0.1,0.03,2.87,1.09,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","AGTCACACGACTAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S36H K56T D90Y S113D E154* V173S",6
"lib2","SARS-CoV-2","AGTCACAGCATATTGA",3,10.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43V W106S F167Y",3
"lib2","SARS-CoV-2","AGTCACAGTGCAGTAA",2,8.01,10.99,0.16,0.06,2.95,1.04,0,"1 nonsynonymous","D97H",1
"lib2","SARS-CoV-2","AGTCACATAATATATA",1,32.11,7.21,-3.63,0.34,1.5,1.18,0.03,">1 nonsynonymous","W106T R136S",2
"lib2","SARS-CoV-2","AGTCACATATACTAAC",7,1.46,NA,NA,NA,NA,NA,NA,"stop","L60F I138*",2
"lib2","SARS-CoV-2","AGTCACATTGAGCTAA",3,14.22,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R27W D34V V37W D68R C102S",5
"lib2","SARS-CoV-2","AGTCACATTGGTGATC",5,134.96,9.6,-1.23,0.03,2.84,1.04,0,">1 nonsynonymous","A81C Y119R K128H",3
"lib2","SARS-CoV-2","AGTCACCCAAATGAGA",23,222.3,10.09,-0.75,0.05,2.6,1.01,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","AGTCACCCCACACTAG",19,368.65,9.25,-1.59,0.06,2.49,1.06,0,">1 nonsynonymous","P7C F44R K87S",3
"lib2","SARS-CoV-2","AGTCACCCTAACCCTT",2,6.82,10.85,0.02,0.13,2.78,1.24,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","AGTCACCGTTGTTCGA",2,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L S45V V65T P149G F167T",5
"lib2","SARS-CoV-2","AGTCACCTTATGGCAA",10,147.78,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9D V115R C158Y",3
"lib2","SARS-CoV-2","AGTCACGCCGGAATCA",2,6.83,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V71M G86M",2
"lib2","SARS-CoV-2","AGTCACGCTCTACTAA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","F17* D97S",2
"lib2","SARS-CoV-2","AGTCACTACCCTACCT",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22S K56L",2
"lib2","SARS-CoV-2","AGTCACTCATAGAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E G51R D90Q I138T H189N",5
"lib2","SARS-CoV-2","AGTCACTCGCCTCGAA",2,12.15,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K48T K56N A67D K94A",4
"lib2","SARS-CoV-2","AGTCAGAAACAAAACG",5,34.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G101N K114G",2
"lib2","SARS-CoV-2","AGTCAGAAACCGAGGG",35,121.25,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1C V71P L162Q",3
"lib2","SARS-CoV-2","AGTCAGATGATCTTTC",2,14.18,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V20R V115K P197A K199E",4
"lib2","SARS-CoV-2","AGTCAGCATAATGTGG",1,9.68,6.31,-4.52,2,1.5,1.17,0.03,">1 nonsynonymous","G101V L162A",2
"lib2","SARS-CoV-2","AGTCAGCCGCCACTAC",12,129.78,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V11Y L38S L57R N120D Y175V S200D",6
"lib2","SARS-CoV-2","AGTCAGCCGGCGCAAG",6,78.15,10.22,-0.62,0.03,2.82,1.03,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","AGTCAGGGATTGTAAT",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150G F167V F185G",3
"lib2","SARS-CoV-2","AGTCAGTATCCCAGTA",10,1.67,NA,NA,NA,NA,NA,NA,"stop","S53* C61R D112V R124F",4
"lib2","SARS-CoV-2","AGTCAGTTAGCCCTGT",10,47.84,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K87P Y93K",2
"lib2","SARS-CoV-2","AGTCAGTTCGGTCCAA",3,64.13,8.59,-2.24,0.08,2.96,1.04,0,"1 nonsynonymous","Q176E",1
"lib2","SARS-CoV-2","AGTCATAAAAAACTCG",4,50.38,10.16,-0.67,0.06,2.89,1.1,0,">1 nonsynonymous","K87M E141L",2
"lib2","SARS-CoV-2","AGTCATAAAAATAGCC",4,80.25,6,-4.84,0.93,1.5,1.1,0.01,">1 nonsynonymous","S29L T46G K56L S113G",4
"lib2","SARS-CoV-2","AGTCATAAAGATAAAG",7,60.6,10.68,-0.15,0.04,2.81,1.17,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","AGTCATAAATACCATT",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K G86T K94L",3
"lib2","SARS-CoV-2","AGTCATAAGCATAGTG",2,49.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F47S D68N K132E",3
"lib2","SARS-CoV-2","AGTCATAATATACTCA",16,64.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13L G86L D90Y Y121L",4
"lib2","SARS-CoV-2","AGTCATAATCCGGATG",4,24.53,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","AGTCATACACACCATT",6,24.81,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V52R K56P D68A F160S T201N",5
"lib2","SARS-CoV-2","AGTCATACATAAAAGT",6,148.87,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F12V G86C L162D G172H",4
"lib2","SARS-CoV-2","AGTCATACGAGAACGA",5,6.02,NA,NA,NA,NA,NA,NA,"stop","N120*",1
"lib2","SARS-CoV-2","AGTCATAGACCTCACT",2,38.37,10.85,0.01,0.06,2.92,1.08,0,">1 nonsynonymous","V52F D59R Y123K",3
"lib2","SARS-CoV-2","AGTCATAGTTATATTT",5,2.11,NA,NA,NA,NA,NA,NA,"stop","S53A F99M N118* Y178L",4
"lib2","SARS-CoV-2","AGTCATATAATGTGGA",8,170.11,10.63,-0.21,0.06,2.94,1.06,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","AGTCATATCACCCCTG",1,19.42,8.54,-2.3,0.15,2.06,1,0.01,">1 nonsynonymous","A14S A81Y F156R",3
"lib2","SARS-CoV-2","AGTCATCAAGTGCTAA",5,218.09,10.22,-0.62,0.01,2.86,1.05,0,"1 nonsynonymous","Y178I",1
"lib2","SARS-CoV-2","AGTCATCACGCTAAAC",5,2.3,NA,NA,NA,NA,NA,NA,"stop","A14I F99Y I142*",3
"lib2","SARS-CoV-2","AGTCATCATAGTAACT",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGTCATCATGGCGAGT",4,20.83,9.42,-1.42,0.22,1.67,1.17,0.05,">1 nonsynonymous","G51T G83L K128M",3
"lib2","SARS-CoV-2","AGTCATCCAAAGTCTG",11,94.76,10.24,-0.6,0.06,2.77,1.09,0,">1 nonsynonymous","D34F F160Y S200W",3
"lib2","SARS-CoV-2","AGTCATGGAATCAAAT",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y V180L",2
"lib2","SARS-CoV-2","AGTCATGGCCGCAAAT",1,132.2,10.01,-0.83,0.04,2.74,1.05,0,">1 nonsynonymous","V11M S43K D97C",3
"lib2","SARS-CoV-2","AGTCATTCAAAACAGT",6,133.35,7.94,-2.89,0.09,1.5,1.11,0,">1 nonsynonymous","D97L K114W S129C Y165V",4
"lib2","SARS-CoV-2","AGTCATTGGGGGCCTG",1,83.77,10.8,-0.04,0.04,2.86,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTCATTGTAATAATC",9,65.17,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","P82S I88V D98S N120Y Q144Y",5
"lib2","SARS-CoV-2","AGTCATTTGTCGATTT",2,30.54,9.92,-0.92,0.07,2.96,1.03,0,">1 nonsynonymous","F126V P149L",2
"lib2","SARS-CoV-2","AGTCCAAAATGGTATT",3,16.49,6.71,-4.13,0.47,1.5,1.24,0.03,">1 nonsynonymous","Q144R C150T",2
"lib2","SARS-CoV-2","AGTCCAACATTTCCAT",1,18.7,6.57,-4.27,0.58,1.5,1.1,0.03,">1 nonsynonymous","F44R V103S G196V",3
"lib2","SARS-CoV-2","AGTCCAACCCACAACA",9,37.31,6.52,-4.31,0.63,1.5,1.22,0.04,">1 nonsynonymous","I2M R16L G86K",3
"lib2","SARS-CoV-2","AGTCCAACCTTGCACC",5,4.87,NA,NA,NA,NA,NA,NA,"stop","A81* Y91H",2
"lib2","SARS-CoV-2","AGTCCAATTGCGTGGC",3,31.21,10.22,-0.61,0.06,2.98,1.04,0,"1 nonsynonymous","Q168G",1
"lib2","SARS-CoV-2","AGTCCACCACCCGCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I L60C F160A",3
"lib2","SARS-CoV-2","AGTCCACCACGCTGCT",1,53.12,10.8,-0.03,0.11,2.86,1.04,0,"1 nonsynonymous","T85I",1
"lib2","SARS-CoV-2","AGTCCACGATTCATGT",11,51.25,7.37,-3.47,0.24,1.5,1.15,0.02,">1 nonsynonymous","F99I Y143M",2
"lib2","SARS-CoV-2","AGTCCACTCGCATAAT",5,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C A33I V77Y I104M G116V S200V",6
"lib2","SARS-CoV-2","AGTCCAGCCTTCGATT",3,23.91,9.43,-1.4,0.17,1.74,1,0.01,">1 nonsynonymous","F12S K128N",2
"lib2","SARS-CoV-2","AGTCCAGCTCTTACTA",10,119.77,10.77,-0.07,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCCAGTCTCACAAT",6,87.96,10.91,0.07,0.06,2.89,1.12,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","AGTCCATAATGGAAAC",4,44.02,10.73,-0.1,0.02,2.99,1.03,0,"1 nonsynonymous","Y39C",1
"lib2","SARS-CoV-2","AGTCCATAGGTTAAAC",1,11.67,8.73,-2.11,0.29,2.37,1,0.04,">1 nonsynonymous","S41W S113Y",2
"lib2","SARS-CoV-2","AGTCCATCAACTCCCC",3,7.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V37G Y91V",2
"lib2","SARS-CoV-2","AGTCCATCGATCGTTT",1,80.1,10.31,-0.52,0.04,2.94,1.08,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","AGTCCATCTGTACACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48S C150T",2
"lib2","SARS-CoV-2","AGTCCATTTGATAAAA",3,16.11,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","I2P S53F I80M C102I G174R R179S",6
"lib2","SARS-CoV-2","AGTCCCAAGCACCTAA",12,159.25,9.93,-0.9,0.04,2.77,1.04,0,">1 nonsynonymous","C6S N110I F160S",3
"lib2","SARS-CoV-2","AGTCCCACTCAAAGTT",1,2.17,NA,NA,NA,NA,NA,NA,"stop","N4L V11R T46N P54I K198*",5
"lib2","SARS-CoV-2","AGTCCCATACTAAAAA",4,93.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8T N171K",2
"lib2","SARS-CoV-2","AGTCCCATCAAGCATC",4,33.72,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A105K P177L V180F",3
"lib2","SARS-CoV-2","AGTCCCCATAACTCAT",3,130.7,10.89,0.06,0.05,2.94,1.08,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","AGTCCCCCATATTAAC",1,6.11,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A33P G86Q",2
"lib2","SARS-CoV-2","AGTCCCCGCACAGGCA",3,135.92,10.83,-0.01,0.05,2.9,1.12,0,">1 nonsynonymous","L5Q T201S",2
"lib2","SARS-CoV-2","AGTCCCGCTAAAATGA",3,96.07,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90S S113L N120R G174R",4
"lib2","SARS-CoV-2","AGTCCCGGGCTGCAAA",13,164.21,10.27,-0.57,0.03,2.8,1.06,0,">1 nonsynonymous","G9V D98R",2
"lib2","SARS-CoV-2","AGTCCCGTATCTTGGG",2,13.56,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A67T Y93T",2
"lib2","SARS-CoV-2","AGTCCCTTATTCCGAG",9,0.18,NA,NA,NA,NA,NA,NA,"stop","V37H T63M G83M L122D F156*",5
"lib2","SARS-CoV-2","AGTCCCTTTCATTTCT",5,28.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34C I88M P96L",3
"lib2","SARS-CoV-2","AGTCCGAAGTCGCAGG",4,20.1,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P96V E135I Y175N",3
"lib2","SARS-CoV-2","AGTCCGACTGAATAAA",12,3.53,NA,NA,NA,NA,NA,NA,"stop","K48I D97V A105T Y143Q P149* G172E",6
"lib2","SARS-CoV-2","AGTCCGATGAAATTTT",18,20.76,NA,NA,NA,NA,NA,NA,"stop","C61G G86S Q176*",3
"lib2","SARS-CoV-2","AGTCCGCAAGGAGATG",1,48.05,10.79,-0.04,0.06,2.86,1.15,0,"1 nonsynonymous","K114Y",1
"lib2","SARS-CoV-2","AGTCCGCATGGTACAT",15,210.12,8.11,-2.73,0.17,1.51,1.09,0.01,">1 nonsynonymous","I104Y N110H N157F S184L",4
"lib2","SARS-CoV-2","AGTCCGCCAGGACTAT",3,15.33,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","F47A G86V Q168L L183S",4
"lib2","SARS-CoV-2","AGTCCGCTGCAAAGAT",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R N107V",2
"lib2","SARS-CoV-2","AGTCCGGATTCACATC",8,232.27,10.16,-0.67,0.01,2.97,1.02,0,">1 nonsynonymous","G9S S41L K87S",3
"lib2","SARS-CoV-2","AGTCCGGGAGAATAAC",4,54.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A22L D97R N107W",3
"lib2","SARS-CoV-2","AGTCCGTAGTATATCC",5,98.37,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C61G K94S Q176L",3
"lib2","SARS-CoV-2","AGTCCTAAGGTTCTTT",3,0.68,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","AGTCCTAATAGGATGC",2,5.59,10.75,-0.08,0.32,2.54,1.45,0.01,">1 nonsynonymous","Y35L D59W",2
"lib2","SARS-CoV-2","AGTCCTACAGACCGAA",2,57,10.79,-0.04,0.03,2.96,1.05,0,">1 nonsynonymous","R16T G116A",2
"lib2","SARS-CoV-2","AGTCCTAGAAAACAAT",8,45.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N24R N92G I104N Q168I C195K",5
"lib2","SARS-CoV-2","AGTCCTAGCATTTCTT",9,124.95,10.78,-0.05,0.04,2.87,1.06,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","AGTCCTAGTACAAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L P169L V173F",3
"lib2","SARS-CoV-2","AGTCCTATAAGATGAT",4,106.95,7.95,-2.88,0.09,2.28,1.08,0,">1 nonsynonymous","I2K C158A",2
"lib2","SARS-CoV-2","AGTCCTATACATGATC",3,53.88,9.53,-1.3,0.07,2.9,1.07,0,">1 nonsynonymous","F8I T170K A192Q",3
"lib2","SARS-CoV-2","AGTCCTATCTGTATCT",1,17.48,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I88G W106S F134L P149A F160M",5
"lib2","SARS-CoV-2","AGTCCTATTCTATAAC",8,50.62,10.43,-0.41,0.07,2.86,1.1,0,">1 nonsynonymous","L5P P54L",2
"lib2","SARS-CoV-2","AGTCCTCACACTACCC",3,131.6,10.32,-0.52,0.03,2.85,1.05,0,">1 nonsynonymous","P96T S147P",2
"lib2","SARS-CoV-2","AGTCCTCACTCACTCA",2,52.72,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4F A22H V37R Y91C Y143E",5
"lib2","SARS-CoV-2","AGTCCTCAGATTCAAT",5,42.55,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","AGTCCTCTGAATCTCT",2,22.75,10.8,-0.04,0.24,2.55,1.1,0.03,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","AGTCCTGGGTTGCCAG",8,9.89,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T55K P149F P197E",3
"lib2","SARS-CoV-2","AGTCCTGTTAATGGGC",1,12.75,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","N107Y",1
"lib2","SARS-CoV-2","AGTCCTTAACAGGAAT",3,0.5,NA,NA,NA,NA,NA,NA,"stop","P54M F99C A105P K199*",4
"lib2","SARS-CoV-2","AGTCCTTATGTGTTCA",3,19.57,6.6,-4.24,0.43,1.5,1.06,0.02,">1 nonsynonymous","I88Y L125F A190S",3
"lib2","SARS-CoV-2","AGTCCTTCATCATATG",4,81.22,10.79,-0.04,0.07,2.85,1.14,0,">1 nonsynonymous","A42G F134G",2
"lib2","SARS-CoV-2","AGTCCTTCGCATATTA",5,0.43,NA,NA,NA,NA,NA,NA,"stop","P82Y F99S I104*",3
"lib2","SARS-CoV-2","AGTCCTTCTGGACCCA",6,34.36,6.06,-4.77,0.55,1.5,1.08,0.01,">1 nonsynonymous","F44I D59N E76G P133L Y178F",5
"lib2","SARS-CoV-2","AGTCCTTGCCTAAAGG",5,2.87,NA,NA,NA,NA,NA,NA,"stop","F44N Y91* Y143*",3
"lib2","SARS-CoV-2","AGTCGAAAACTAACTA",21,556.74,9.41,-1.43,0.03,2.91,1.07,0,">1 nonsynonymous","L5N E141G N171L",3
"lib2","SARS-CoV-2","AGTCGAAAAGAAACAA",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118I R127I D137G T170R",4
"lib2","SARS-CoV-2","AGTCGAAAATTAGTAA",10,167.65,10.67,-0.16,0.02,2.94,1.02,0,">1 nonsynonymous","A33F D34N E141L",3
"lib2","SARS-CoV-2","AGTCGAAAATTCTCCT",3,48.24,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V11N F99D F160L Q176L",4
"lib2","SARS-CoV-2","AGTCGAACCTACGCTA",1,107.84,8.74,-2.09,0.09,2.76,1.09,0,">1 nonsynonymous","Y91I N157G",2
"lib2","SARS-CoV-2","AGTCGAACTCAAGCGA",5,43.03,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I2N F44I N58P A105L R179L",5
"lib2","SARS-CoV-2","AGTCGACACGAAGAAT",4,60.44,10.37,-0.47,0.05,2.81,1.1,0,">1 nonsynonymous","A33P N40R P149R",3
"lib2","SARS-CoV-2","AGTCGACCCGACGTAC",4,12.69,8.05,-2.79,0.33,1.5,1,0.04,">1 nonsynonymous","I28W S43L G86S S139E N171I",5
"lib2","SARS-CoV-2","AGTCGACCCTACCGCT",10,123.86,10.09,-0.74,0.06,2.67,1.08,0,">1 nonsynonymous","G9A N13D F44A F160A",4
"lib2","SARS-CoV-2","AGTCGACCTCAGTAGG",9,195.27,9.88,-0.95,0.07,2.43,1.04,0,">1 nonsynonymous","Y35P D90L",2
"lib2","SARS-CoV-2","AGTCGACGCCTTAATA",6,121,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K94A W106Y L122V R127M F185R",5
"lib2","SARS-CoV-2","AGTCGAGATGGAGGCT",3,31.3,10.72,-0.11,0.05,2.89,1.13,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","AGTCGATATTCGGTAA",3,21.07,9.42,-1.41,0.16,1.89,1.15,0.01,">1 nonsynonymous","K48Y T55S L183F K198S",4
"lib2","SARS-CoV-2","AGTCGATTAGCATCAG",7,62.81,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S43I L57Q I72T F99V D112H",5
"lib2","SARS-CoV-2","AGTCGCAAAATTCTTA",13,157.34,10.09,-0.74,0.04,2.92,1,0,">1 nonsynonymous","Y91L I142Y",2
"lib2","SARS-CoV-2","AGTCGCACAATAGCTT",2,21.74,9.55,-1.28,0.38,1.5,1,0.06,">1 nonsynonymous","Q84D Q144R",2
"lib2","SARS-CoV-2","AGTCGCACCATTAAAT",2,29.24,10.25,-0.59,0.1,2.78,1.09,0,">1 nonsynonymous","D90F E141Q",2
"lib2","SARS-CoV-2","AGTCGCCATCAAGTGT",2,93.4,9.69,-1.15,0.06,2.12,1.04,0,">1 nonsynonymous","E10K S36V Y91M",3
"lib2","SARS-CoV-2","AGTCGCCGATACGTTT",13,130.27,6,-4.84,2,2.56,1.21,0.01,">1 nonsynonymous","C6F T55R A81N Y119N",4
"lib2","SARS-CoV-2","AGTCGCCGCAACAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T N120V S129N",3
"lib2","SARS-CoV-2","AGTCGCCGGACTATTT",19,190.05,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C150S L162V",2
"lib2","SARS-CoV-2","AGTCGCCTACAGTTAG",3,20.25,9.52,-1.32,0.08,3,1.01,0,">1 nonsynonymous","E141R A145L P197M",3
"lib2","SARS-CoV-2","AGTCGCGAAAATTACT",4,60.77,9.25,-1.58,0.1,1.69,1.08,0.01,">1 nonsynonymous","G83V D90G",2
"lib2","SARS-CoV-2","AGTCGCTCAAGTTAAG",3,26.75,10.91,0.07,0.05,2.94,1.05,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","AGTCGCTGCCCTCTAT",11,146.55,9.33,-1.51,0.03,2.98,1.06,0,">1 nonsynonymous","Y119W Q168R",2
"lib2","SARS-CoV-2","AGTCGGACGATATCAT",1,8.09,9.1,-1.73,0.16,1.85,1.13,0.01,"1 nonsynonymous","P82S",1
"lib2","SARS-CoV-2","AGTCGGAGACTGACGC",4,42.23,10.98,0.14,0.06,3,1,0,"1 nonsynonymous","N64S",1
"lib2","SARS-CoV-2","AGTCGGAGTTTCAATT",5,93.8,6,-4.83,0.62,1.5,1.14,0.01,">1 nonsynonymous","P82M N130D P149N",3
"lib2","SARS-CoV-2","AGTCGGCAAGTTCCCA",9,94.82,10.88,0.04,0.05,2.94,1.08,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","AGTCGGCAATACTTAA",2,37.51,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9V A22L Q79H Y121M P149N",5
"lib2","SARS-CoV-2","AGTCGGCTGCTCTGAT",3,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C N64I D112I P149M",4
"lib2","SARS-CoV-2","AGTCGGGACACTGTTT",6,31.18,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Q79R C158R G172M",3
"lib2","SARS-CoV-2","AGTCGGGCGATCCCTC",27,222.24,6.18,-4.66,0.5,1.5,1.22,0.01,">1 nonsynonymous","G83Y D98L N107V",3
"lib2","SARS-CoV-2","AGTCGGGTTAGAAATG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","P7N A42S T170*",3
"lib2","SARS-CoV-2","AGTCGGTGCTTGAAAA",3,136.74,8.89,-1.94,0.05,2.94,1.07,0,">1 nonsynonymous","Y39L L122R Q176G",3
"lib2","SARS-CoV-2","AGTCGTAAAGTTAACG",5,0.31,NA,NA,NA,NA,NA,NA,"stop","W106S N120*",2
"lib2","SARS-CoV-2","AGTCGTAAGAACTTTA",10,31.7,9.97,-0.87,0.11,2.57,1,0.01,">1 nonsynonymous","A22N V181L",2
"lib2","SARS-CoV-2","AGTCGTACAAAATTAG",2,35.11,9.97,-0.87,0.09,2.13,1.05,0,"1 nonsynonymous","S69L",1
"lib2","SARS-CoV-2","AGTCGTACCGAAGCTA",7,55.69,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I72T K94F E141P",3
"lib2","SARS-CoV-2","AGTCGTCATCGATTTT",1,19.56,8.97,-1.86,0.18,2.19,1.06,0.02,">1 nonsynonymous","P82V T170K",2
"lib2","SARS-CoV-2","AGTCGTCCGGGTACTG",10,87.42,10.67,-0.17,0.04,2.97,1.05,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","AGTCGTGTCATATTAA",10,107.27,9.48,-1.36,0.09,1.6,1.11,0,">1 nonsynonymous","I104V R136G",2
"lib2","SARS-CoV-2","AGTCGTTAATCATGTC",2,0.34,NA,NA,NA,NA,NA,NA,"stop","D97Y S139D S184*",3
"lib2","SARS-CoV-2","AGTCGTTACATTCCAT",1,48.28,8.95,-1.89,0.13,2.45,1.09,0.01,">1 nonsynonymous","S36Y Y175N",2
"lib2","SARS-CoV-2","AGTCTAAAAATAAACC",2,107.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5N F12V Y39S Y93M G174S",5
"lib2","SARS-CoV-2","AGTCTAAACATGTTAC",4,17.18,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T3L Y35R D90R D112L F134P",5
"lib2","SARS-CoV-2","AGTCTAAACCAAACGT",8,121.32,9.6,-1.24,0.05,2.13,1.07,0,"1 nonsynonymous","R179H",1
"lib2","SARS-CoV-2","AGTCTAAAGTTGCAGG",4,14.11,9.38,-1.46,0.47,1.5,1.09,0.05,">1 nonsynonymous","V77F D98E",2
"lib2","SARS-CoV-2","AGTCTAAATTTACTTT",1,22.49,10.57,-0.26,0.04,2.93,1.07,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","AGTCTAACATGACTAC",4,15.54,7.61,-3.23,0.31,1.5,1.25,0.05,">1 nonsynonymous","F12D A18P V71P",3
"lib2","SARS-CoV-2","AGTCTAACGGGGGCAA",10,85.38,10.76,-0.07,0.05,2.91,1.08,0,"1 nonsynonymous","S36M",1
"lib2","SARS-CoV-2","AGTCTAATGACGTGAC",1,202.25,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","P177H",1
"lib2","SARS-CoV-2","AGTCTAATGATCATAG",3,23.03,6.56,-4.28,0.41,1.5,1.16,0.01,">1 nonsynonymous","Y21G S36H P169T",3
"lib2","SARS-CoV-2","AGTCTAATTCGTGGAT",1,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N L122M P149L V173K V181F",5
"lib2","SARS-CoV-2","AGTCTAATTTCCGGCA",7,57.4,10.4,-0.44,0.08,2.76,1.09,0,">1 nonsynonymous","L5Q A14I G83H",3
"lib2","SARS-CoV-2","AGTCTACAGACTTGAC",15,752.42,10.72,-0.12,0.03,2.94,1.07,0,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","AGTCTACAGGAGATAA",8,98.19,6.46,-4.38,0.41,1.5,1.16,0.01,">1 nonsynonymous","L162W T170K T201E",3
"lib2","SARS-CoV-2","AGTCTACATATGCACC",2,11.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6Y Y50S I88V",3
"lib2","SARS-CoV-2","AGTCTACGAAAGTGCA",7,7.6,NA,NA,NA,NA,NA,NA,"stop","K56* D90S N130K",3
"lib2","SARS-CoV-2","AGTCTAGAAAAAGACC",3,45.71,10.71,-0.12,0.11,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTAGTAACATCTG",2,2.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","AGTCTATAAGTCATGA",3,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101R Q144K G155D F167G",4
"lib2","SARS-CoV-2","AGTCTATAATTCGTTA",5,31.86,7.03,-3.81,0.42,1.5,1.07,0.04,"1 nonsynonymous","V103F",1
"lib2","SARS-CoV-2","AGTCTATAATTGATTC",1,14.02,9.03,-1.81,0.17,1.95,1.09,0.02,">1 nonsynonymous","A18M F62Y N92S",3
"lib2","SARS-CoV-2","AGTCTATACCTGATAC",2,48.09,10.85,0.02,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTATATAACTCAT",7,154.38,10.78,-0.05,0.04,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTATCAATCGTTA",4,0.25,NA,NA,NA,NA,NA,NA,"stop","L57Q E76* N151S",3
"lib2","SARS-CoV-2","AGTCTATCAGAGAGGG",9,92.63,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P161L G172V",2
"lib2","SARS-CoV-2","AGTCTATGCATCAAGT",1,12.1,7.74,-3.1,0.25,1.5,1.16,0.03,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","AGTCTATTAGATACGG",18,185.65,8.67,-2.16,0.21,1.5,1,0.02,">1 nonsynonymous","V11M T46A T55D D90S D97Y",5
"lib2","SARS-CoV-2","AGTCTATTGGATGTAA",6,1.6,NA,NA,NA,NA,NA,NA,"stop","I2D T15I R25* F44S G51N P133R S147R F160C Q168*",9
"lib2","SARS-CoV-2","AGTCTATTTAGTCCAA",7,1377.5,10.43,-0.41,0.02,2.9,1.01,0,">1 nonsynonymous","Y66M S184Y",2
"lib2","SARS-CoV-2","AGTCTCAACAAGACCA",6,53.22,8.26,-2.58,0.13,2.44,1,0.01,">1 nonsynonymous","K87W Y121P",2
"lib2","SARS-CoV-2","AGTCTCACAATATTTG",4,22.61,7.08,-3.76,0.3,2.58,1.38,0.03,">1 nonsynonymous","F70S N118R Y165S",3
"lib2","SARS-CoV-2","AGTCTCAGAAAGAAAT",4,6.66,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","AGTCTCAGAAGTCAAG",11,2.34,NA,NA,NA,NA,NA,NA,"stop","S45L V52* A67I A89V S129W V153N",6
"lib2","SARS-CoV-2","AGTCTCAGCAGGATCG",8,1.81,NA,NA,NA,NA,NA,NA,"stop","K94Y S200*",2
"lib2","SARS-CoV-2","AGTCTCCAAAAAGATT",4,149.72,7.87,-2.96,0.28,1.5,1.09,0.03,">1 nonsynonymous","N24Y D137Q",2
"lib2","SARS-CoV-2","AGTCTCCGCGATATAC",3,37.82,8.36,-2.48,0.13,2.84,1.02,0.01,">1 nonsynonymous","L125K E141F",2
"lib2","SARS-CoV-2","AGTCTCCTTCAGATCC",4,33.73,9.55,-1.29,0.11,2.03,1.05,0,">1 nonsynonymous","Y35H I138F",2
"lib2","SARS-CoV-2","AGTCTCGAGGAAAGAG",6,84.76,8.81,-2.03,0.1,1.74,1.08,0,">1 nonsynonymous","A33R E135W",2
"lib2","SARS-CoV-2","AGTCTCGTCAGAGAAA",1,17.95,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","N92T V103C",2
"lib2","SARS-CoV-2","AGTCTCTAGGACGAAC",6,37.32,6,-4.84,2,3,1.09,0,">1 nonsynonymous","I2T I80A P96S T201A",4
"lib2","SARS-CoV-2","AGTCTCTCAACTCATC",7,54.57,10.94,0.1,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTCTTTATGCGTT",3,56.92,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N4S V37L T85D K94G S108P G152Y L162S K199N",8
"lib2","SARS-CoV-2","AGTCTGAAAACGAAAG",1,39,9.82,-1.02,0.06,2.93,1.09,0,">1 nonsynonymous","V37I L125T",2
"lib2","SARS-CoV-2","AGTCTGAACCACATAA",21,150.49,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y91P L95S N118V",3
"lib2","SARS-CoV-2","AGTCTGAAGGCCTAGA",1,41.72,6,-4.84,0.94,1.5,1.12,0.01,">1 nonsynonymous","A14M S113L",2
"lib2","SARS-CoV-2","AGTCTGAATAGACAAT",3,11.87,10.08,-0.76,0.1,2.66,1.31,0.01,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","AGTCTGAATATAAGTG",9,104.97,10.23,-0.6,0.04,2.88,1.04,0,">1 nonsynonymous","N1L G9Y T46E C61E",4
"lib2","SARS-CoV-2","AGTCTGAATCAAAAAC",1,6.64,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19L Y121F V173F",3
"lib2","SARS-CoV-2","AGTCTGACAGCAAAAT",1,11.25,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y21P F44L R78L D98Y Y121A Y165S",6
"lib2","SARS-CoV-2","AGTCTGAGAAAAACCT",2,26.57,9.79,-1.05,0.14,1.87,1.04,0.01,">1 nonsynonymous","F44S A105G",2
"lib2","SARS-CoV-2","AGTCTGATGCCACCCT",6,45.8,6,-4.84,2,1.5,1.28,0.04,"1 nonsynonymous","Y93E",1
"lib2","SARS-CoV-2","AGTCTGCAATTAATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","K26V D90* E135D Y165R",4
"lib2","SARS-CoV-2","AGTCTGCGAGGCTAAA",17,250.15,9.73,-1.11,0.06,2.13,1.05,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","AGTCTGCTATACCAAC",4,14.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S A105L S139C N157D T201Y",5
"lib2","SARS-CoV-2","AGTCTGCTTGCAAAGT",4,21.24,10.81,-0.02,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTGGTAACTCTGA",4,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L N64V Y119R P169S",4
"lib2","SARS-CoV-2","AGTCTGTAAATGCAGC",2,19.96,6,-4.84,2,1.5,1.37,0.06,">1 nonsynonymous","N4G P96F S113A",3
"lib2","SARS-CoV-2","AGTCTGTTCACATTAT",12,112.87,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35L C61H I72T E76G T100L F134I N157L L162K",8
"lib2","SARS-CoV-2","AGTCTGTTCTAATATA",5,49.94,10.1,-0.73,0.09,2.66,1.07,0,">1 nonsynonymous","P96R Q163R",2
"lib2","SARS-CoV-2","AGTCTTAAATGTTCTA",4,24.91,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y35N S41V N64L P82K Y91G T148M",6
"lib2","SARS-CoV-2","AGTCTTAAGCGGTTCA",4,147.93,10.45,-0.38,0.04,2.86,1.09,0,">1 nonsynonymous","L5D K128T N151F L188F A192I",5
"lib2","SARS-CoV-2","AGTCTTACATTAGTAC",4,88.3,10.73,-0.11,0.04,2.89,1.12,0,">1 nonsynonymous","L60H N120G P149E Y175W S200N",5
"lib2","SARS-CoV-2","AGTCTTACCCCGATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* N13I",2
"lib2","SARS-CoV-2","AGTCTTATAACGGTAT",3,40.55,10.53,-0.3,0.09,2.77,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTCTTATGATGACTG",1,28.88,10.27,-0.56,0.11,2.59,1,0.01,">1 nonsynonymous","I2W V77T",2
"lib2","SARS-CoV-2","AGTCTTATTCAGAAAA",1,12.99,6.21,-4.63,0.76,1.5,1.08,0.04,">1 nonsynonymous","R16M F99T N120T V153F",4
"lib2","SARS-CoV-2","AGTCTTATTGTCTGGA",1,61.29,10.25,-0.59,0.03,2.94,1.03,0,">1 nonsynonymous","R16Y G51H Y123S",3
"lib2","SARS-CoV-2","AGTCTTCAATGCCTGT",6,58.48,10.18,-0.66,0.09,2.3,1.01,0,">1 nonsynonymous","S139L P149H",2
"lib2","SARS-CoV-2","AGTCTTCAGATTGACA",13,91.5,6.15,-4.69,0.87,1.5,1.19,0.02,">1 nonsynonymous","P7A V52S L57T N107C",4
"lib2","SARS-CoV-2","AGTCTTCATATGTAAG",16,6.49,NA,NA,NA,NA,NA,NA,"stop","C49V S108* Q168T K199T",4
"lib2","SARS-CoV-2","AGTCTTCATCAAAAAA",2,31.03,10.44,-0.4,0.07,2.92,1.05,0,">1 nonsynonymous","I104M E135G",2
"lib2","SARS-CoV-2","AGTCTTCCGGTGCCAG",3,32.4,10.84,0.01,0.07,2.94,1.1,0,"1 nonsynonymous","L5T",1
"lib2","SARS-CoV-2","AGTCTTCCTTCAGACT",19,184.52,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S19K K26R V173H P177S",4
"lib2","SARS-CoV-2","AGTCTTCGGAAATAAC",8,420.6,10.84,0.01,0.04,2.92,1.09,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","AGTCTTCTATGCGGAG",3,9.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5K A14K Y35N S129I P191F K199M",6
"lib2","SARS-CoV-2","AGTCTTGACTTATCGC",3,24.74,8.74,-2.1,0.08,2.92,1.09,0,">1 nonsynonymous","C61Y A145Y",2
"lib2","SARS-CoV-2","AGTCTTGAGAACATTA",2,20.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y21F K56M D68A T201H",4
"lib2","SARS-CoV-2","AGTCTTGGAAATGCAA",2,18.64,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G86H R136T",2
"lib2","SARS-CoV-2","AGTCTTGGTCTTATTT",2,24.79,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","R25Y T85L",2
"lib2","SARS-CoV-2","AGTCTTGTTCAGCGTA",1,41.85,7.9,-2.94,0.18,1.73,1.12,0.01,">1 nonsynonymous","N58R A89H P133M",3
"lib2","SARS-CoV-2","AGTCTTTAAGTTGATC",1,0.22,NA,NA,NA,NA,NA,NA,"stop","Q84* Y93* R124Q",3
"lib2","SARS-CoV-2","AGTCTTTAATAACTTT",2,19.56,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","G9K N151Y V153L G172N",4
"lib2","SARS-CoV-2","AGTCTTTAGTATCTTC",10,131.47,8.74,-2.09,0.07,2.9,1.14,0,">1 nonsynonymous","L5M F44I N157D N171S",4
"lib2","SARS-CoV-2","AGTCTTTATGGAAAGT",1,43.49,10.92,0.08,0.06,2.87,1.13,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","AGTCTTTCGATAACGT",7,53.17,7.49,-3.35,0.17,1.5,1.14,0.01,">1 nonsynonymous","G83S L131V I142Y G146T",4
"lib2","SARS-CoV-2","AGTCTTTGGCACGCCT",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16Y Y93K D98N",3
"lib2","SARS-CoV-2","AGTGAAAACTAGTACT",6,46.76,9.02,-1.82,0.16,1.82,1.1,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","AGTGAAAAGATCAAAC",3,31.06,10.52,-0.32,0.07,2.89,1.08,0,">1 nonsynonymous","E135M T201D",2
"lib2","SARS-CoV-2","AGTGAAAAGCGCACAT",6,147.55,10.61,-0.23,0.05,2.95,1.05,0,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","AGTGAAACAAACTATA",2,17.41,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","S41C I104E I142T N157Y",4
"lib2","SARS-CoV-2","AGTGAAACACGATGGT",1,35.26,9.84,-1,0.07,2.04,1.08,0,">1 nonsynonymous","D97H C102M",2
"lib2","SARS-CoV-2","AGTGAAACTCAGAACT",4,21.07,10.19,-0.65,0.08,2.69,1.06,0,">1 nonsynonymous","N40C D97M",2
"lib2","SARS-CoV-2","AGTGAAAGTCGCGAAA",3,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P F47R D59Q S129N N157C",5
"lib2","SARS-CoV-2","AGTGAAATAAACTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L60S L95M K128* R136C",4
"lib2","SARS-CoV-2","AGTGAACAAAAACACG",10,222.39,10.85,0.01,0.07,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGAACAAGTGTATA",7,0.47,NA,NA,NA,NA,NA,NA,"stop","E76R A105* N118M L131V F167M",5
"lib2","SARS-CoV-2","AGTGAACACACAACTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F V103M K114V",3
"lib2","SARS-CoV-2","AGTGAACATCTTACGC",19,2.18,NA,NA,NA,NA,NA,NA,"stop","D68G I88* L187K P197K",4
"lib2","SARS-CoV-2","AGTGAACCAGTCAGAA",1,65.19,10.25,-0.58,0.07,2.24,1.05,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","AGTGAACCCGTTTTCT",2,1,NA,NA,NA,NA,NA,NA,"stop","C31K C61L G86*",3
"lib2","SARS-CoV-2","AGTGAACCTACATTAA",6,11.62,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","Y21V I72D T100C T170G",4
"lib2","SARS-CoV-2","AGTGAACCTAGTTTTA",1,41.04,8.77,-2.06,0.11,3,1.08,0.01,">1 nonsynonymous","N1S Y159L",2
"lib2","SARS-CoV-2","AGTGAACTATATCAAT",1,22.17,10.87,0.03,0.06,2.88,1.06,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","AGTGAACTTGAATGCC",3,10.22,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Y93H N130S",2
"lib2","SARS-CoV-2","AGTGAAGAAAGAATAC",5,22.61,9.1,-1.74,0.17,1.82,1.16,0.01,">1 nonsynonymous","R16V P96S D97Y F160L",4
"lib2","SARS-CoV-2","AGTGAAGAACTGTACC",5,85.53,10.62,-0.21,0.03,2.86,1.1,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","AGTGAATAAACTAAAG",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80S Y119R",2
"lib2","SARS-CoV-2","AGTGAATAAGAAAAAT",1,30.41,10.51,-0.32,0.06,2.85,1.06,0,">1 nonsynonymous","P96N T201M",2
"lib2","SARS-CoV-2","AGTGAATAAGCATTAA",8,2.94,NA,NA,NA,NA,NA,NA,"stop","W23* V37G V153*",3
"lib2","SARS-CoV-2","AGTGAATATCGAGTAC",6,51.63,9.85,-0.98,0.09,2.25,1.02,0,">1 nonsynonymous","L5C V11D Y35F H189Y",4
"lib2","SARS-CoV-2","AGTGAATCAAAGAGAC",4,98.36,10.89,0.05,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGAATGCAGTTTGC",1,6.07,9.33,-1.51,0.31,2.09,1,0.02,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","AGTGAATTGTACAAAC",1,15.53,6.82,-4.02,0.39,1.5,1.12,0.03,">1 nonsynonymous","R16F F70H N171S",3
"lib2","SARS-CoV-2","AGTGAATTGTTACATG",8,47.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37N T85M Y93G Y123T N130T E141T G146T",7
"lib2","SARS-CoV-2","AGTGAATTTATGTTGT",4,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L I104S S129P Y165T S184R",5
"lib2","SARS-CoV-2","AGTGAATTTCAAGTTA",2,6.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F K132D",2
"lib2","SARS-CoV-2","AGTGAATTTGGTTAAA",3,57.41,9.7,-1.13,0.1,2.16,1,0,">1 nonsynonymous","C49W S164W",2
"lib2","SARS-CoV-2","AGTGACAACAACTATG",4,78.16,10.74,-0.1,0.04,2.98,1.06,0,">1 nonsynonymous","V37D C61S T140K",3
"lib2","SARS-CoV-2","AGTGACAACCAACCAT",2,114.54,10.8,-0.04,0.04,2.92,1.11,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","AGTGACAAGAGGTATT",3,109,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C31L D90W G166D",3
"lib2","SARS-CoV-2","AGTGACAATCAACATA",2,14.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R D98G C102L S147I V173H",5
"lib2","SARS-CoV-2","AGTGACAATCGCCAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","G101T F134S Q144* G152R F160H N171D",6
"lib2","SARS-CoV-2","AGTGACACCAAACATT",2,33.34,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F8I D112E Y175T",3
"lib2","SARS-CoV-2","AGTGACACGGTCAACC",2,34.63,9.84,-1,0.07,2.14,1.03,0,">1 nonsynonymous","G83V E141Y",2
"lib2","SARS-CoV-2","AGTGACAGAAACAGTT",4,45.79,9.93,-0.9,0.11,2.15,1.16,0.01,">1 nonsynonymous","F99Y E141V",2
"lib2","SARS-CoV-2","AGTGACATATAACGGA",4,7.69,10.92,0.08,0.12,2.9,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTGACATCAAACTAT",3,40.39,6.64,-4.19,0.36,1.5,1.11,0.02,">1 nonsynonymous","V37S L122G N151K L162S",4
"lib2","SARS-CoV-2","AGTGACATGAGGCACA",6,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A A42V V77D R127A E141V",5
"lib2","SARS-CoV-2","AGTGACCACCTTAATA",6,115.63,9.16,-1.68,0.09,1.86,1.12,0,">1 nonsynonymous","R16M A67I Q84K D97C P149N",5
"lib2","SARS-CoV-2","AGTGACCCCTAAGCAG",3,13.47,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T15R R27L L38C K56S D90P D97S",6
"lib2","SARS-CoV-2","AGTGACCGACCTTGAC",7,9.52,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","C6R P82L D90W V103T",4
"lib2","SARS-CoV-2","AGTGACCTGATTGCTG",1,0.32,NA,NA,NA,NA,NA,NA,"stop","C49G T55G I72V R127*",4
"lib2","SARS-CoV-2","AGTGACGACGACCCAG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F8R V37* Y50H P82T I104Q K132V",6
"lib2","SARS-CoV-2","AGTGACGATTTCGTGA",6,19.44,6,-4.83,0.73,3,1.28,0.01,">1 nonsynonymous","R27I D59Y A89R T140E",4
"lib2","SARS-CoV-2","AGTGACTCTAAATGTC",1,18.1,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","E10R D68L E135L L162R",4
"lib2","SARS-CoV-2","AGTGACTTTATAAACA",9,60.57,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F70C G116E T201H",3
"lib2","SARS-CoV-2","AGTGACTTTCAACGAT",3,55.94,10.69,-0.14,0.05,3,1.01,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","AGTGAGAAAATGAAAG",6,3.2,NA,NA,NA,NA,NA,NA,"stop","N1W A42P C49* K56D A89V",5
"lib2","SARS-CoV-2","AGTGAGAAAGGGGAAA",5,113.58,6,-4.84,2,3,1.2,0,">1 nonsynonymous","A18E Y35V F99K G146Q S164G",5
"lib2","SARS-CoV-2","AGTGAGAAATTTAATG",2,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F F62D E141A",3
"lib2","SARS-CoV-2","AGTGAGAACCATTATG",11,248.88,10.73,-0.11,0.04,2.96,1.06,0,">1 nonsynonymous","K56G F62S",2
"lib2","SARS-CoV-2","AGTGAGCACCACGATT",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T N58R G86N S113T",4
"lib2","SARS-CoV-2","AGTGAGCTAGTTTGTC",15,83.67,9.09,-1.74,0.22,1.5,1,0.02,">1 nonsynonymous","N1M K94L",2
"lib2","SARS-CoV-2","AGTGAGGAAAGAATCG",4,7.32,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","F12S C49T Y123S E141Y",4
"lib2","SARS-CoV-2","AGTGAGGATACGACAA",7,75.28,10.66,-0.17,0.02,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTGAGTAACAGAGTA",7,49.4,8.62,-2.21,0.17,1.82,1.19,0.01,">1 nonsynonymous","A14P V103I G174S",3
"lib2","SARS-CoV-2","AGTGAGTACCGAAAAC",2,0.47,NA,NA,NA,NA,NA,NA,"stop","A14S I142N T201*",3
"lib2","SARS-CoV-2","AGTGAGTGAGGTTCTT",4,59.03,6,-4.84,1.84,1.5,1.11,0,">1 nonsynonymous","Y39L Y50L A105W N120C L187P",5
"lib2","SARS-CoV-2","AGTGAGTTACACGTTT",4,17.94,10.18,-0.65,0.05,3,1.02,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","AGTGATAAAATAACCG",7,8.34,NA,NA,NA,NA,NA,NA,"stop","D68Y L95M W106*",3
"lib2","SARS-CoV-2","AGTGATAAATAATCTA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","T46* D90C",2
"lib2","SARS-CoV-2","AGTGATAAGGAGCGCG",3,31.14,8.73,-2.11,0.05,2.82,1.02,0,">1 nonsynonymous","G51S Q168L",2
"lib2","SARS-CoV-2","AGTGATAAGGTATGAA",5,486.68,7.19,-3.65,0.16,1.5,1.06,0.01,">1 nonsynonymous","V103M L125A F134T",3
"lib2","SARS-CoV-2","AGTGATACACAGCGAT",13,5.08,NA,NA,NA,NA,NA,NA,"stop","G51* N92E G172M",3
"lib2","SARS-CoV-2","AGTGATAGATGAAGTT",1,13.17,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","S36R K87T D98K R124W P133I",5
"lib2","SARS-CoV-2","AGTGATAGTATACAAC",8,183.78,6.4,-4.44,0.43,1.5,1.16,0.01,"1 nonsynonymous","Y178G",1
"lib2","SARS-CoV-2","AGTGATATACTTAGAA",1,29.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20G I28N Q84S",3
"lib2","SARS-CoV-2","AGTGATATCATGTGAG",6,52.44,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","I88F V173H R179L",3
"lib2","SARS-CoV-2","AGTGATCACTGGTGAC",8,149.39,10.81,-0.02,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGATCAGTTAGGCA",15,1.42,NA,NA,NA,NA,NA,NA,"stop","E10G F44* P82S N120G K132L I138M N157A Y175F",8
"lib2","SARS-CoV-2","AGTGATCCTACGAACA",2,1.74,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","AGTGATCCTTAGAGTT",16,316.34,10.31,-0.52,0.03,2.91,1.09,0,">1 nonsynonymous","N1G S36L G116D",3
"lib2","SARS-CoV-2","AGTGATCTGTTGCCAG",3,25.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6R A14L Y50N T55L G146T",5
"lib2","SARS-CoV-2","AGTGATGAATCAGCAT",10,168.32,8.24,-2.6,0.11,2.08,1.1,0,">1 nonsynonymous","D98H N157Y",2
"lib2","SARS-CoV-2","AGTGATGATTTGAGAT",5,57.83,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D34R T55G G146I",3
"lib2","SARS-CoV-2","AGTGATGCGAAACATG",2,0,NA,NA,NA,NA,NA,NA,"stop","V11L F44L F99*",3
"lib2","SARS-CoV-2","AGTGATGCTCCAATGG",8,45.98,6,-4.84,1.75,1.5,1.2,0.03,">1 nonsynonymous","I88F Q144S",2
"lib2","SARS-CoV-2","AGTGATGGCCCGACAT",3,48.97,8.6,-2.24,0.18,1.73,1.21,0.01,">1 nonsynonymous","N1I N107M",2
"lib2","SARS-CoV-2","AGTGATTAATTAAAAC",1,13.35,10.59,-0.25,0.15,2.83,1.17,0.02,">1 nonsynonymous","F17W K56R V115H H189Y",4
"lib2","SARS-CoV-2","AGTGATTAGTATAAAA",1,12.34,10.42,-0.41,0.19,2.38,1.11,0.02,">1 nonsynonymous","T3L N107S",2
"lib2","SARS-CoV-2","AGTGATTATGAGATAA",13,123,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N30L P82A V115M",3
"lib2","SARS-CoV-2","AGTGATTCAAACTCCT",6,181.38,9.37,-1.46,0.06,2.77,1.1,0,">1 nonsynonymous","Q84V F160P G174Y T201R",4
"lib2","SARS-CoV-2","AGTGATTGAAAATAAA",5,1.19,NA,NA,NA,NA,NA,NA,"stop","G9S K48Y T55N A105N Y119* Y143N V182R",7
"lib2","SARS-CoV-2","AGTGATTTCACTTGAA",6,111.49,10.86,0.02,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGCAAAGCTTAACC",1,6.76,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F44V C102L Y119V",3
"lib2","SARS-CoV-2","AGTGCAACTAAAGTGT",3,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T C49L T63W Q84N V103D R136Y L183S",7
"lib2","SARS-CoV-2","AGTGCAACTTAACTTT",4,77.23,9.32,-1.52,0.07,1.83,1.06,0,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","AGTGCAAGAATTATAG",1,5.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","AGTGCAAGTTAAATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S I80L Y91C F99E Y119A C150Y",6
"lib2","SARS-CoV-2","AGTGCACACTACCCAA",3,5.32,6.26,-4.57,0.77,3,1.06,0.02,">1 nonsynonymous","D90E Y91A N107W",3
"lib2","SARS-CoV-2","AGTGCACATCCCTCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95M S139N",2
"lib2","SARS-CoV-2","AGTGCACCAAGATTTG",4,34.35,6.89,-3.94,0.26,1.96,1.13,0.02,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","AGTGCACGACGCTGCC",2,49.05,9.98,-0.85,0.13,2.17,1.04,0.01,">1 nonsynonymous","P54E D112I",2
"lib2","SARS-CoV-2","AGTGCACGCGGTCCTC",3,0.55,NA,NA,NA,NA,NA,NA,"stop","K48A T55L T63* N151I",4
"lib2","SARS-CoV-2","AGTGCATAGTAAGATG",7,25.29,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","I2G V52W C150V",3
"lib2","SARS-CoV-2","AGTGCATATATAATTA",2,35.64,10.54,-0.3,0.06,2.91,1.04,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","AGTGCATATCGCCTAA",9,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y C102H N118F",3
"lib2","SARS-CoV-2","AGTGCATATGACACTA",5,36.68,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C49Y Y143C L162M P177Q",4
"lib2","SARS-CoV-2","AGTGCATGAGTCCCAG",2,34.12,10.67,-0.17,0.02,2.98,1.02,0,">1 nonsynonymous","N4H T85I",2
"lib2","SARS-CoV-2","AGTGCATGGTAAATAA",2,5.24,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V32Q Y123Q I138G",3
"lib2","SARS-CoV-2","AGTGCATTAACGATGT",2,49.13,9.91,-0.93,0.08,2.7,1.03,0,">1 nonsynonymous","Y66L Y91H",2
"lib2","SARS-CoV-2","AGTGCATTTACCAAAG",6,114.49,9.69,-1.14,0.06,2.62,1.07,0,">1 nonsynonymous","Q84L L131V G174S",3
"lib2","SARS-CoV-2","AGTGCATTTATCCTAA",6,9.5,6.13,-4.71,0.86,1.5,1.12,0.03,">1 nonsynonymous","Y21L S69V S113M E135A",4
"lib2","SARS-CoV-2","AGTGCATTTGAAAATG",18,199.87,9.27,-1.56,0.03,2.94,1.07,0,"1 nonsynonymous","G117N",1
"lib2","SARS-CoV-2","AGTGCATTTGCCGGCT",1,6.58,8.53,-2.3,0.33,1.5,1,0.03,">1 nonsynonymous","I2Y N30V T46L G152V",4
"lib2","SARS-CoV-2","AGTGCCATATAAAATA",18,1.72,NA,NA,NA,NA,NA,NA,"stop","K94N G174*",2
"lib2","SARS-CoV-2","AGTGCCCCAACCAGTT",4,100.65,9.1,-1.74,0.08,2.62,1.13,0,">1 nonsynonymous","D97F N120T P149S",3
"lib2","SARS-CoV-2","AGTGCCCCACGTTAAA",8,101.62,9.74,-1.09,0.04,2.91,1.08,0,">1 nonsynonymous","N58S I142F F160S",3
"lib2","SARS-CoV-2","AGTGCCCCACTTAGTA",12,112.2,10.58,-0.26,0.03,2.97,1.04,0,">1 nonsynonymous","K87T I138M",2
"lib2","SARS-CoV-2","AGTGCCCCCCGAAACC",1,21.8,6.09,-4.75,0.91,3,1.19,0.02,">1 nonsynonymous","N1M Y93I N118F",3
"lib2","SARS-CoV-2","AGTGCCCCGATAACAA",4,28.94,6.14,-4.69,0.67,1.5,1.12,0.01,">1 nonsynonymous","E10T G74C Q84H S164V",4
"lib2","SARS-CoV-2","AGTGCCCGGCTCGCGA",14,246.3,10.86,0.02,0.05,2.95,1.07,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","AGTGCCCTTATGACTT",7,7.8,9.19,-1.65,0.56,1.5,1,0.05,">1 nonsynonymous","S41I A81F S139N",3
"lib2","SARS-CoV-2","AGTGCCCTTCTCAATC",2,94.71,9.12,-1.72,0.21,1.73,1.12,0.02,">1 nonsynonymous","R27L Y165R",2
"lib2","SARS-CoV-2","AGTGCCGACGATAAAG",11,32.28,6.9,-3.94,0.39,1.5,1.13,0.02,">1 nonsynonymous","V11K A33F K114L F126S",4
"lib2","SARS-CoV-2","AGTGCCGCACACTTAA",13,64.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R P96Q E141F",3
"lib2","SARS-CoV-2","AGTGCCGGAATAAGCA",2,54.52,9.16,-1.67,0.13,1.74,1.18,0.01,"1 nonsynonymous","F8R",1
"lib2","SARS-CoV-2","AGTGCCTAATACTTAC",3,0.32,NA,NA,NA,NA,NA,NA,"stop","N30W K198*",2
"lib2","SARS-CoV-2","AGTGCCTCCAGCATGG",1,52.59,10.57,-0.27,0.07,2.96,1.05,0,">1 nonsynonymous","A42G I138Y",2
"lib2","SARS-CoV-2","AGTGCGAATCGGTAAC",5,40.8,10.23,-0.61,0.06,2.84,1.05,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","AGTGCGACCTATACAT",1,32.1,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N40F F47R F70M G155I T201N",5
"lib2","SARS-CoV-2","AGTGCGATAATTGGGC",4,64.24,10.37,-0.46,0.05,2.92,1.03,0,">1 nonsynonymous","S53M V65M E141Y",3
"lib2","SARS-CoV-2","AGTGCGATATGAAATG",2,11.47,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","T63G F167T",2
"lib2","SARS-CoV-2","AGTGCGATCGACAATG",8,134.36,10.8,-0.03,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGCGCAAATTTACG",16,340.62,6.85,-3.98,0.26,1.5,1.15,0.01,">1 nonsynonymous","E10F R16N G51H G166H",4
"lib2","SARS-CoV-2","AGTGCGCAAGGGACCT",1,22.97,9.24,-1.6,0.16,1.84,1.11,0.01,">1 nonsynonymous","L38S F62G",2
"lib2","SARS-CoV-2","AGTGCGCCATATGCGT",2,14.84,9.94,-0.89,0.14,2.25,1.09,0.01,">1 nonsynonymous","F12V C61N E135S T201S",4
"lib2","SARS-CoV-2","AGTGCGCCCTTATTTA",4,9.04,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y119P L183P",2
"lib2","SARS-CoV-2","AGTGCGCTATGTATGA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","S41A G83N P96* G146S",4
"lib2","SARS-CoV-2","AGTGCGGATTTCAAAA",2,14.24,9.8,-1.04,0.08,2.89,1.14,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","AGTGCGGATTTCCGTA",3,30.79,10.87,0.03,0.07,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGCGTCTATCATAC",6,74.94,9.29,-1.55,0.06,2.93,1.07,0,">1 nonsynonymous","L5H S43F P149T T170F",4
"lib2","SARS-CoV-2","AGTGCTAAACTATTAG",2,20.68,7.32,-3.52,0.4,1.5,1.21,0.04,">1 nonsynonymous","Y123S F156N Q168C",3
"lib2","SARS-CoV-2","AGTGCTACACCTTAAC",2,29.83,11,0.16,0.08,2.83,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGCTACCTATGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* D137S T170L",3
"lib2","SARS-CoV-2","AGTGCTACGATATGAA",17,753.42,9.53,-1.31,0.04,2.07,1.02,0,"1 nonsynonymous","A89Q",1
"lib2","SARS-CoV-2","AGTGCTACTATGTGGA",2,21.76,6,-4.84,2,1.5,1.45,0.07,">1 nonsynonymous","A22D G101Q L131Y",3
"lib2","SARS-CoV-2","AGTGCTAGCTTTGAGT",3,39.65,7.91,-2.92,0.1,2.12,1.08,0.01,">1 nonsynonymous","S113L G117D N151Q",3
"lib2","SARS-CoV-2","AGTGCTCGCGATTTCC",6,163.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40T S45Q T85D Q144G Q176T T201M",6
"lib2","SARS-CoV-2","AGTGCTGACACACACA",1,35.5,10.79,-0.04,0.05,2.95,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGCTGATTCCGACT",9,95.02,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F12E V37C N107Y R127L",4
"lib2","SARS-CoV-2","AGTGCTGCTTGTCGAG",18,137.9,6,-4.84,0.6,1.5,1.2,0,">1 nonsynonymous","V11S P54L I104W Y121D S200Y",5
"lib2","SARS-CoV-2","AGTGCTGGCAGCTCCA",3,76.46,10.76,-0.08,0.05,2.98,1.06,0,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","AGTGCTGTTCATTCAG",3,43.47,8.99,-1.85,0.13,2.65,1.15,0.01,">1 nonsynonymous","N118L F160A",2
"lib2","SARS-CoV-2","AGTGCTTAGGCTAATA",3,32.78,8.7,-2.14,0.11,2.59,1,0.01,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","AGTGCTTATCAATTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61* Y93P F99D",3
"lib2","SARS-CoV-2","AGTGCTTTAATCACAG",4,92.09,10.58,-0.26,0.04,2.96,1.02,0,">1 nonsynonymous","S36Y N58K T201M",3
"lib2","SARS-CoV-2","AGTGGAAAAACCTATA",13,65.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T55E L131W T170S",3
"lib2","SARS-CoV-2","AGTGGAAAGCTTCACT",7,5.05,NA,NA,NA,NA,NA,NA,"stop","S108L N118S Q176*",3
"lib2","SARS-CoV-2","AGTGGAACTTGAGCAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D Y119V",2
"lib2","SARS-CoV-2","AGTGGAAGGCGCCAGT",16,229.28,10.83,0,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTGGAATCAGAAAAT",2,24.78,6.37,-4.47,0.5,2.04,1.24,0.01,">1 nonsynonymous","V11L A42K Y50R G83H A89I D98G E154S",7
"lib2","SARS-CoV-2","AGTGGAATGAAGTAAT",9,44.15,8.85,-1.98,0.38,1.5,1.02,0.06,">1 nonsynonymous","D34T V103A N157A",3
"lib2","SARS-CoV-2","AGTGGACAAAAACCTG",8,43.5,8.26,-2.58,0.27,1.5,1.24,0.02,">1 nonsynonymous","G9K D59G W106A V194I",4
"lib2","SARS-CoV-2","AGTGGACCTAAAGGCA",3,1.78,NA,NA,NA,NA,NA,NA,"stop","N4* N58L H189L A192S",4
"lib2","SARS-CoV-2","AGTGGACCTGTAACCC",5,6.04,NA,NA,NA,NA,NA,NA,"stop","C6M T100* Y123R I142*",4
"lib2","SARS-CoV-2","AGTGGACGCTTCATTG",3,20.63,10.37,-0.46,0.07,3,1.03,0.01,">1 nonsynonymous","T55L F156R",2
"lib2","SARS-CoV-2","AGTGGACTCGAATAGA",8,74.96,9.91,-0.93,0.04,2.81,1.01,0,">1 nonsynonymous","F8I D90S A145S T201M",4
"lib2","SARS-CoV-2","AGTGGAGGGTAATCCA",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S V103F",2
"lib2","SARS-CoV-2","AGTGGAGTATAAATTG",6,72.67,9.91,-0.92,0.07,2.75,1.13,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","AGTGGATAAATATCTG",1,20.42,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N58K G86F Y121F",3
"lib2","SARS-CoV-2","AGTGGATAGAACTATT",5,16.95,8.51,-2.33,0.44,1.5,1.09,0.05,">1 nonsynonymous","L5H C61M P82T T201I",4
"lib2","SARS-CoV-2","AGTGGATATAAGAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* T55F L122P",3
"lib2","SARS-CoV-2","AGTGGATGGAATCAGT",10,53.94,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V52Y S113D I142A",3
"lib2","SARS-CoV-2","AGTGGATTTAGCCGCA",10,61.39,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T63S F99S R136Y P149E V173T",5
"lib2","SARS-CoV-2","AGTGGCAAACTATTAA",7,38.79,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D68M D137V G146S C150G G166L",5
"lib2","SARS-CoV-2","AGTGGCAAAGGGTTAT",3,49.4,6.89,-3.95,0.31,1.5,1.1,0.02,">1 nonsynonymous","N4I S45K I80L F134G",4
"lib2","SARS-CoV-2","AGTGGCAACAGCCCCA",11,195.23,10.83,-0.01,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGCACCACACGTG",6,66.7,9.56,-1.28,0.1,1.91,1.04,0.01,">1 nonsynonymous","S43T S69V",2
"lib2","SARS-CoV-2","AGTGGCAGAATGATAT",5,93.72,6,-4.84,1.62,1.5,1.16,0.01,">1 nonsynonymous","S53F N130C T148C Y175L",4
"lib2","SARS-CoV-2","AGTGGCCATTAAAACG",5,57.26,9.36,-1.47,0.1,1.94,1.13,0,">1 nonsynonymous","F12C Y39V L187D",3
"lib2","SARS-CoV-2","AGTGGCCCCCTACAGC",3,5.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84Y N120F F134N T148N A190F",5
"lib2","SARS-CoV-2","AGTGGCTAAATTTAAA",7,56.22,10.84,0.01,0.05,2.92,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGCTAGAATACGA",7,70.45,10.96,0.13,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGCTGTCTGCAAC",5,91.82,10.92,0.08,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGCTGTGGGTCGA",14,288.37,10.69,-0.15,0.03,2.98,1.03,0,"1 nonsynonymous","N58M",1
"lib2","SARS-CoV-2","AGTGGGACGAAGAGAA",5,90.75,9.77,-1.06,0.03,2.93,1.06,0,">1 nonsynonymous","G116T E154V P169N",3
"lib2","SARS-CoV-2","AGTGGGAGATTAGTCT",2,13.99,10.79,-0.05,0.04,3,1.03,0,">1 nonsynonymous","G9D P133S",2
"lib2","SARS-CoV-2","AGTGGGAGTAGTATAT",1,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","AGTGGGATGCAAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F99K Y123* G155L S200M",4
"lib2","SARS-CoV-2","AGTGGGGGTACATTGT",3,46.15,10.78,-0.06,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGGTACTCTACTA",1,2.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","AGTGGGTCGCATCCTT",1,59.2,10.75,-0.09,0.05,2.93,1.07,0,">1 nonsynonymous","D90T V173L",2
"lib2","SARS-CoV-2","AGTGGTAACATCTAAT",14,181.74,10.85,0.02,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGTAGTATCATAT",1,65.53,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N4M I28R V37D Y50S A81R L95V G166A",7
"lib2","SARS-CoV-2","AGTGGTATACATACAT",5,117.95,10.8,-0.04,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGGTATTAATGATA",2,16.21,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","V52S I88R F126K C150Y",4
"lib2","SARS-CoV-2","AGTGGTCTAAATATCA",5,40.84,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","G9Q I138T C150W",3
"lib2","SARS-CoV-2","AGTGGTTCGATTCTAA",14,166.27,10.54,-0.3,0.03,2.95,1.04,0,"1 nonsynonymous","G116I",1
"lib2","SARS-CoV-2","AGTGGTTTGTAACCCC",6,118.58,10.8,-0.04,0.05,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTGTAAGAATGCCTA",13,50.04,7.8,-3.04,0.33,1.5,1.04,0.05,">1 nonsynonymous","G83C F99H S129Y K198Q",4
"lib2","SARS-CoV-2","AGTGTACGAGGGGAGA",7,144.8,10.3,-0.54,0.04,2.91,1.09,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","AGTGTAGTAAAAGAGG",5,43.77,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D68W K94I K128S E135A F185A",5
"lib2","SARS-CoV-2","AGTGTATGAACATTTG",4,24.45,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","W23K D90F N109Q L122G N130I",5
"lib2","SARS-CoV-2","AGTGTATTTGATGTGA",12,105.96,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T100N W106S Q176L",3
"lib2","SARS-CoV-2","AGTGTCAACACAATAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81M R124M",2
"lib2","SARS-CoV-2","AGTGTCCAGACACCAA",2,37.99,10.09,-0.74,0.1,2.81,1,0,">1 nonsynonymous","D59I K128G",2
"lib2","SARS-CoV-2","AGTGTCCTACGAAAAA",5,27.33,6,-4.84,2,3,1.11,0,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","AGTGTCCTCGCGTACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L A67F P161M",3
"lib2","SARS-CoV-2","AGTGTCGCCGCCCTAC",6,100.64,10.49,-0.35,0.05,2.85,1.07,0,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","AGTGTCTCAGAATCAA",2,70.52,10.03,-0.81,0.07,2.57,1.09,0,">1 nonsynonymous","Y66A D98S K114R S129E",4
"lib2","SARS-CoV-2","AGTGTCTCAGACGTGA",5,203.38,10.6,-0.23,0.05,2.92,1.06,0,"1 nonsynonymous","Y66H",1
"lib2","SARS-CoV-2","AGTGTCTGAAAACCTA",10,5.32,NA,NA,NA,NA,NA,NA,"stop","N4M A81T Y119* S139G",4
"lib2","SARS-CoV-2","AGTGTCTTCAACCGAC",4,16.82,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","F44L V71L N120T P149L",4
"lib2","SARS-CoV-2","AGTGTCTTTCATAACT",4,23.42,10.78,-0.05,0.07,2.88,1.16,0,"1 nonsynonymous","N130R",1
"lib2","SARS-CoV-2","AGTGTGATATCATTAG",8,34.55,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C6N L57Y S69W P82K F99I Q168N",6
"lib2","SARS-CoV-2","AGTGTGTAAGTGTACA",2,12.58,8.58,-2.26,0.27,1.5,1.04,0.04,">1 nonsynonymous","N1L S36P T100W K132A",4
"lib2","SARS-CoV-2","AGTGTTAAGTTTTAGA",3,40.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S43W N64L Q144Y F160C G172L",5
"lib2","SARS-CoV-2","AGTGTTACTCCACTAC",13,217.25,10.06,-0.78,0.06,2.51,1.02,0,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","AGTGTTAGACGGCCCG",6,52.21,9.81,-1.02,0.15,2,1.07,0.01,">1 nonsynonymous","Y66I D90N P96R T201W",4
"lib2","SARS-CoV-2","AGTGTTCAAAACGTTA",5,4.04,NA,NA,NA,NA,NA,NA,"stop","P7K R16P W23* T201R",4
"lib2","SARS-CoV-2","AGTGTTCCGAATCAAT",20,247.06,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S29C K94T",2
"lib2","SARS-CoV-2","AGTGTTCGAACTAGAA",2,38.67,10.13,-0.71,0.12,2.92,1,0,"1 nonsynonymous","G155V",1
"lib2","SARS-CoV-2","AGTGTTCGCCCTTGTT",15,336.04,10.61,-0.23,0.03,2.87,1.11,0,">1 nonsynonymous","S45H N120S T201N",3
"lib2","SARS-CoV-2","AGTGTTGAGGAACCTA",14,291.38,7.33,-3.5,0.14,1.9,1.14,0,">1 nonsynonymous","I142L Y175E",2
"lib2","SARS-CoV-2","AGTGTTGATGTAAGTG",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q A14L V20P C61M T201S",5
"lib2","SARS-CoV-2","AGTGTTGCAAAGTATT",3,30.93,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L60G R124L",2
"lib2","SARS-CoV-2","AGTGTTGGCGAAAACA",4,25.63,10.87,0.03,0.09,2.78,1.16,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","AGTGTTGTTAGTCATT",4,73.31,10.33,-0.5,0.03,2.97,1.06,0,">1 nonsynonymous","S36T K87W I138E",3
"lib2","SARS-CoV-2","AGTGTTTAACTCGGGA",5,2.66,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","AGTGTTTACGCACATA",7,59.34,9.18,-1.65,0.1,1.5,1.03,0.01,">1 nonsynonymous","A22Y S29G A105Y",3
"lib2","SARS-CoV-2","AGTGTTTGGCTATACG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23H A33Y C49P C61F S139G K199T",6
"lib2","SARS-CoV-2","AGTGTTTTTGATCAGG",1,15.03,9.56,-1.28,0.42,1.54,1.06,0.07,">1 nonsynonymous","A33G L57G D90T",3
"lib2","SARS-CoV-2","AGTTAAAAAGAGAGAA",3,2.82,NA,NA,NA,NA,NA,NA,"stop","I2T P7* K56L Q84P W106M S113M Y143* V153R",8
"lib2","SARS-CoV-2","AGTTAAAAAGCATTTT",7,39.04,6.11,-4.73,0.6,1.5,1.12,0.01,">1 nonsynonymous","G9E I88K S184A",3
"lib2","SARS-CoV-2","AGTTAAAAATAGACAC",1,18.99,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A42C T55C Y165H N171L",4
"lib2","SARS-CoV-2","AGTTAAAATAACACAC",13,436.61,10.13,-0.71,0.03,2.94,1.07,0,">1 nonsynonymous","V37R G51N G146D",3
"lib2","SARS-CoV-2","AGTTAAAATTAACGCA",1,11.89,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C6V K87R Y93L I138V P197T",5
"lib2","SARS-CoV-2","AGTTAAAATTCATGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26W",1
"lib2","SARS-CoV-2","AGTTAAACCCGAGACT",5,109.94,10.62,-0.22,0.04,2.97,1.05,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","AGTTAAACTGACAAGT",1,5.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M K48G D97S Y123Q",4
"lib2","SARS-CoV-2","AGTTAAAGACATTCCC",3,62.77,10.06,-0.78,0.11,2.11,1.12,0.01,">1 nonsynonymous","G83I N107R L122K",3
"lib2","SARS-CoV-2","AGTTAAAGCTGGTAAG",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S N13M K48L N107L V181S",5
"lib2","SARS-CoV-2","AGTTAAAGCTTAAAAG",1,71.85,10.93,0.09,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTAAATAACATCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L E141R P169H",3
"lib2","SARS-CoV-2","AGTTAAATAATCGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27T F134*",2
"lib2","SARS-CoV-2","AGTTAAATATGGTTAC",3,73.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V37S I138L G172W",3
"lib2","SARS-CoV-2","AGTTAAATCCCCCGAC",1,12.12,10.46,-0.37,0.07,2.88,1.1,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","AGTTAAATCGGGTGGT",4,87.87,10.18,-0.66,0.06,2.62,1.03,0,"1 nonsynonymous","F47R",1
"lib2","SARS-CoV-2","AGTTAAATTGAAGACT",6,91.36,8.6,-2.24,0.06,2.99,1.04,0,">1 nonsynonymous","F126Y I138M Q163E",3
"lib2","SARS-CoV-2","AGTTAAATTTGCTCCT",1,45.23,6.4,-4.43,0.62,1.5,1.2,0.03,">1 nonsynonymous","Y35Q D90H N120I",3
"lib2","SARS-CoV-2","AGTTAACAAGTCAAGG",3,50.97,10.09,-0.75,0.09,2.66,1.03,0,">1 nonsynonymous","D34T N58F",2
"lib2","SARS-CoV-2","AGTTAACAATTCCACA",7,53.49,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G9L G74F P82F G116M E141M",5
"lib2","SARS-CoV-2","AGTTAACATTCGAAAC",11,147.37,10.82,-0.01,0.03,2.97,1.04,0,"1 nonsynonymous","K56T",1
"lib2","SARS-CoV-2","AGTTAACCCACTCCCC",11,76.79,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","P82L G86R V173Y",3
"lib2","SARS-CoV-2","AGTTAACCCTCTTGGT",14,133.84,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9S F62H A81L Y159G S184I",5
"lib2","SARS-CoV-2","AGTTAACGCAAACGAA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","E10G L57* I88* K114E E154D",5
"lib2","SARS-CoV-2","AGTTAACGCTAGAGTT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","S45* F62* F156T",3
"lib2","SARS-CoV-2","AGTTAACGTTAATCCT",3,32.73,9.79,-1.05,0.13,2.26,1.07,0.01,">1 nonsynonymous","E10K F62R N151F",3
"lib2","SARS-CoV-2","AGTTAACTAGGGCCGT",3,58.94,10.85,0.01,0.04,2.94,1.03,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","AGTTAACTCTATGAAA",7,131.98,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2P E10W Y39N R73E R127V R136G V153F",7
"lib2","SARS-CoV-2","AGTTAAGAAAACAAAT",3,2.82,NA,NA,NA,NA,NA,NA,"stop","I28* F44Y F62S S139G F167Y",5
"lib2","SARS-CoV-2","AGTTAAGACTAAGCGG",14,146.32,10.81,-0.03,0.03,2.96,1.06,0,"1 nonsynonymous","D97H",1
"lib2","SARS-CoV-2","AGTTAAGAGTTATGTG",12,355.89,10.4,-0.44,0.05,2.9,1.05,0,">1 nonsynonymous","T3D D90S K114E S129R",4
"lib2","SARS-CoV-2","AGTTAAGATAGCCGTG",7,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V C61R L95A",3
"lib2","SARS-CoV-2","AGTTAAGATCAGGGCT",5,110.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y66P P82Q G101C R179M",4
"lib2","SARS-CoV-2","AGTTAAGGAACATATT",8,98.63,10.69,-0.14,0.02,2.9,1.09,0,"1 nonsynonymous","Y121H",1
"lib2","SARS-CoV-2","AGTTAAGTCACATATG",5,47.97,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","K56G W106R P133D G172E",4
"lib2","SARS-CoV-2","AGTTAAGTGACATTTT",11,68.29,6.62,-4.22,0.58,1.5,1.27,0.04,">1 nonsynonymous","K56T P161V T170F",3
"lib2","SARS-CoV-2","AGTTAAGTGCCCGCAA",3,23.93,9.99,-0.84,0.15,2.04,1,0.01,">1 nonsynonymous","S45D A81S Y178L",3
"lib2","SARS-CoV-2","AGTTAAGTTAATCTGA",6,39.14,6.45,-4.38,0.73,1.5,1.19,0.04,">1 nonsynonymous","K56R G83V Y123E K199Q",4
"lib2","SARS-CoV-2","AGTTAATATCAATTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","AGTTAATATGGCCCGT",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M S69L K94T N120G E154G",5
"lib2","SARS-CoV-2","AGTTAATTCCAACAAA",8,129.6,9.36,-1.47,0.04,2.87,1.15,0,">1 nonsynonymous","V37L Y119Q S147M",3
"lib2","SARS-CoV-2","AGTTAATTCTAGACAG",11,128.48,6,-4.84,2,1.5,1.14,0,"1 nonsynonymous","R124E",1
"lib2","SARS-CoV-2","AGTTAATTTAGAACTT",4,60.46,6,-4.84,0.63,3,1.07,0,">1 nonsynonymous","T63N A81M N107H Y175F",4
"lib2","SARS-CoV-2","AGTTACAAACGAATAC",2,9.62,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F70S A89S L122R Y165R",4
"lib2","SARS-CoV-2","AGTTACAAATTACAAA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","C49* N58S V153I",3
"lib2","SARS-CoV-2","AGTTACAACGAGACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* R25L",2
"lib2","SARS-CoV-2","AGTTACAATGTGAATT",3,71.73,6.81,-4.03,0.22,1.5,1.11,0.01,"1 nonsynonymous","G172D",1
"lib2","SARS-CoV-2","AGTTACACAATTAGCT",7,0,NA,NA,NA,NA,NA,NA,"stop","Y39T N58P P96V Y123M I142*",5
"lib2","SARS-CoV-2","AGTTACAGATGAAATA",2,25.09,8.73,-2.11,0.05,2.86,1.04,0,">1 nonsynonymous","N120R N157H",2
"lib2","SARS-CoV-2","AGTTACATCTGGTACT",4,22.48,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93T R124L Y178F",3
"lib2","SARS-CoV-2","AGTTACCAATACAAAA",17,151.85,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","R27C D98C V103L",3
"lib2","SARS-CoV-2","AGTTACCCTTCGTAGA",1,15.91,10.83,-0.01,0.08,2.89,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTTACCGAATTATGG",20,359.13,10.34,-0.49,0.03,2.87,1.08,0,">1 nonsynonymous","Q84C S129F",2
"lib2","SARS-CoV-2","AGTTACCTCGAAAAGA",3,13.35,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","I2R P7S I80W E141P",4
"lib2","SARS-CoV-2","AGTTACCTTGTGTGCG",7,111.64,10.22,-0.62,0.04,2.91,1,0,">1 nonsynonymous","N1C K56G T85I",3
"lib2","SARS-CoV-2","AGTTACGGAACACTAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H S113Q N120S P149E",4
"lib2","SARS-CoV-2","AGTTACTATCTCTTAG",9,120.24,10.57,-0.27,0.03,2.96,1.03,0,">1 nonsynonymous","I2P F156I",2
"lib2","SARS-CoV-2","AGTTACTCACCCAAAA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C G83V A105L G116H",4
"lib2","SARS-CoV-2","AGTTACTGTTTAACCA",6,90.46,8.57,-2.27,0.1,2.82,1.04,0,"1 nonsynonymous","S113R",1
"lib2","SARS-CoV-2","AGTTACTTGATGAGGG",4,38.76,9.71,-1.13,0.1,2.05,1.07,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","AGTTAGAAACCCTAGG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","V37G K48* D98R P133H T201S",5
"lib2","SARS-CoV-2","AGTTAGAAAGTTCTAC",3,9.32,6,-4.84,1.82,3,1.14,0.01,">1 nonsynonymous","E10A A42G Y93S",3
"lib2","SARS-CoV-2","AGTTAGAACAGGGGAC",1,7.9,6,-4.84,2,3,1.05,0,">1 nonsynonymous","E10S W23K G101L S129R Y143K",5
"lib2","SARS-CoV-2","AGTTAGACCAGACCTT",4,36.73,10.92,0.08,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTAGATTAAATATT",1,61.51,10.5,-0.33,0.05,2.95,1.02,0,">1 nonsynonymous","T55N D98F",2
"lib2","SARS-CoV-2","AGTTAGCAAAAATAAC",1,4.07,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","AGTTAGCATGGGAACA",8,243.48,10.24,-0.59,0.03,2.93,1.07,0,">1 nonsynonymous","D98N P149H F156L",3
"lib2","SARS-CoV-2","AGTTAGCCTGAAAAAA",2,44.46,8.67,-2.17,0.18,1.5,1.09,0.01,">1 nonsynonymous","F62R R78T I138R S164F",4
"lib2","SARS-CoV-2","AGTTAGCGATATAAAT",8,44.58,10.74,-0.09,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTAGGAAGCTGTCT",8,149.82,10.82,-0.01,0.1,2.8,1.09,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","AGTTAGGAGCCGGTGA",2,9.58,6,-4.84,2,1.5,1.03,0.03,">1 nonsynonymous","Y39G N107T D137R",3
"lib2","SARS-CoV-2","AGTTAGGTAAAAAAAA",1,0.06,NA,NA,NA,NA,NA,NA,"stop","Y39* K87L",2
"lib2","SARS-CoV-2","AGTTAGTATAATGAAG",8,144.71,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38P C49L F126L A145N Q176W",5
"lib2","SARS-CoV-2","AGTTAGTCCTTTGAAT",25,471.43,8.41,-2.43,0.12,2.43,1.13,0.01,">1 nonsynonymous","D112S K198N K199Y",3
"lib2","SARS-CoV-2","AGTTAGTCTTCTTCTG",2,40.92,10.07,-0.77,0.12,2.26,1.06,0.01,">1 nonsynonymous","T140H Q163P",2
"lib2","SARS-CoV-2","AGTTAGTTAAACTATT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","A14* Q144L",2
"lib2","SARS-CoV-2","AGTTAGTTAATATAAG",6,3.39,NA,NA,NA,NA,NA,NA,"stop","G86R Y119* V153S",3
"lib2","SARS-CoV-2","AGTTAGTTGTTGATGT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G V103M Y121R",3
"lib2","SARS-CoV-2","AGTTAGTTTAACGGTC",7,45.84,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","K56W Y91L L131K T140N P177M",5
"lib2","SARS-CoV-2","AGTTAGTTTGAAAGAC",5,11.15,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14K C61Y I72Q D112T F156V N171S",6
"lib2","SARS-CoV-2","AGTTATAAAGTAACTT",5,63.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23T S45L Y121C Y143N T201P",5
"lib2","SARS-CoV-2","AGTTATAACCAATATT",13,346.31,10.71,-0.13,0.02,2.98,1.04,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","AGTTATAACCACTACA",5,66.32,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8L C158V",2
"lib2","SARS-CoV-2","AGTTATAAGCCAATCT",2,14.18,7.85,-2.98,0.34,1.5,1,0.06,">1 nonsynonymous","N130T L162G P197Q T201K",4
"lib2","SARS-CoV-2","AGTTATAATAGGCTAG",3,21.35,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R16V Y50N N58R P82G",4
"lib2","SARS-CoV-2","AGTTATAATATTTAGA",10,3.22,NA,NA,NA,NA,NA,NA,"stop","N4Y R25* Y35G R73E P82N",5
"lib2","SARS-CoV-2","AGTTATACAATAAGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","A33Q L60*",2
"lib2","SARS-CoV-2","AGTTATACAATTGAGC",5,138.02,9.98,-0.86,0.05,2.88,1.07,0,">1 nonsynonymous","L5A K48M Y175H",3
"lib2","SARS-CoV-2","AGTTATACGGTTCAGG",7,53.56,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","D68G N109G",2
"lib2","SARS-CoV-2","AGTTATACTAATCGAA",1,7.54,6,-4.84,2,3,1.02,0,">1 nonsynonymous","G9T L95N V115L S129L L183I T201C",6
"lib2","SARS-CoV-2","AGTTATAGTCGAGATA",1,29.79,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V37R G74T Y91I",3
"lib2","SARS-CoV-2","AGTTATAGTCTACAAA",1,6.67,9.62,-1.22,0.37,1.5,1.05,0.07,">1 nonsynonymous","V37S D68V",2
"lib2","SARS-CoV-2","AGTTATATATTAAGTC",2,32.09,9.67,-1.16,0.08,1.97,1.09,0,">1 nonsynonymous","N13D N64W E141Y",3
"lib2","SARS-CoV-2","AGTTATATCATTCACT",4,31.79,8.25,-2.59,0.19,1.78,1.09,0.02,">1 nonsynonymous","R16L D97N N157Y",3
"lib2","SARS-CoV-2","AGTTATCCAACATAAT",12,201.66,10.71,-0.12,0.04,2.91,1.1,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","AGTTATCCTTAGCAAA",3,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112L T140V",2
"lib2","SARS-CoV-2","AGTTATCCTTATTCGA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","A14C Y35F F134* L162E",4
"lib2","SARS-CoV-2","AGTTATCCTTTACGTG",4,65.33,6.02,-4.82,1.31,1.5,1.16,0.02,">1 nonsynonymous","Y39D N64Y G146V V181W T201S",5
"lib2","SARS-CoV-2","AGTTATCGAACTACGA",1,92.7,8.21,-2.62,0.15,2.25,1.01,0.01,">1 nonsynonymous","D97E A105S T140I Y159L Y178F",5
"lib2","SARS-CoV-2","AGTTATCTACGCTCGA",4,49.97,10.68,-0.16,0.06,2.99,1.04,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","AGTTATGAACTACTTC",6,146.65,10.28,-0.56,0.05,2.73,1.04,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","AGTTATGAGATGCCAT",7,2.54,NA,NA,NA,NA,NA,NA,"stop","C49L C150*",2
"lib2","SARS-CoV-2","AGTTATGCAGGGAGGA",10,115.11,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","K26Q L38H D75Y P133S P149L",5
"lib2","SARS-CoV-2","AGTTATGGACAGTAAG",3,38.52,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N30L P149C Y175I",3
"lib2","SARS-CoV-2","AGTTATGGGATTGGAC",1,19.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N D112H Y121A S139E",4
"lib2","SARS-CoV-2","AGTTATGGTTATCAAA",5,228.79,8.2,-2.63,0.11,2.16,1.08,0,">1 nonsynonymous","T46V N157H Q168T",3
"lib2","SARS-CoV-2","AGTTATGTACATTTAA",8,134.54,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6I A145L Y175T",3
"lib2","SARS-CoV-2","AGTTATTACCTAAATT",1,8.44,6.03,-4.81,0.79,1.5,1.14,0.01,">1 nonsynonymous","W23R I142L V173N",3
"lib2","SARS-CoV-2","AGTTATTACGGTTAAG",3,96.18,9.35,-1.48,0.08,1.74,1.09,0,">1 nonsynonymous","V173T K198T",2
"lib2","SARS-CoV-2","AGTTATTATAATTATA",9,173.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2G G172L",2
"lib2","SARS-CoV-2","AGTTATTATTTAAACC",3,12.02,NA,NA,NA,NA,NA,NA,"stop","Y119* K132F P177S",3
"lib2","SARS-CoV-2","AGTTATTGAAAGCGTA",3,37.34,9.45,-1.39,0.12,2.16,1.04,0.01,">1 nonsynonymous","C31F Q84L",2
"lib2","SARS-CoV-2","AGTTATTTTTAAGGTA",7,52.38,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","V77T G101P Y159T",3
"lib2","SARS-CoV-2","AGTTCAAAACTAATAG",7,170.64,10.73,-0.1,0.03,2.97,1.03,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","AGTTCAAAATACAGAA",5,59.9,10.96,0.12,0.05,2.95,1.06,0,">1 nonsynonymous","K114S P169R",2
"lib2","SARS-CoV-2","AGTTCAAAGACAAAAT",2,20.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S45P V182K",2
"lib2","SARS-CoV-2","AGTTCAAAGGTTCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K D112W N120S G152K",4
"lib2","SARS-CoV-2","AGTTCAAAGTAACATG",18,228.8,9.77,-1.07,0.05,2.07,1.04,0,">1 nonsynonymous","S41R F99M",2
"lib2","SARS-CoV-2","AGTTCAAATATCAAAG",1,16.31,10.59,-0.24,0.09,2.76,1.16,0,">1 nonsynonymous","A42I F126L",2
"lib2","SARS-CoV-2","AGTTCAAGACTTTATG",6,26.47,6,-4.84,2,3,1.37,0.01,">1 nonsynonymous","C6S D98F V103G P133K",4
"lib2","SARS-CoV-2","AGTTCAAGCATACGAC",26,852.95,9.8,-1.04,0.03,2.03,1.05,0,">1 nonsynonymous","T3P E10K A18M N151L",4
"lib2","SARS-CoV-2","AGTTCAAGTCACTAGA",5,41.68,9.24,-1.6,0.17,1.5,1.07,0.01,">1 nonsynonymous","N40G T55W A81Y",3
"lib2","SARS-CoV-2","AGTTCACACCCTAACT",7,134.31,10.85,0.02,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","AGTTCACAGATTTTTG",6,138.37,10.8,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTCACAGTCCAGAG",11,1.37,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","AGTTCACTATTCAACA",3,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I W106C G166C",3
"lib2","SARS-CoV-2","AGTTCACTGCCATGCA",8,100.04,9.41,-1.42,0.08,1.73,1.12,0,">1 nonsynonymous","R27W C61H W106I T201Y",4
"lib2","SARS-CoV-2","AGTTCAGAAATACTGC",11,121.76,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4Y F44R K87M G101I G152R K199T",6
"lib2","SARS-CoV-2","AGTTCAGAAGTTATAC",2,27.86,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8D P82Q R136D",3
"lib2","SARS-CoV-2","AGTTCAGACCGGGATA",5,14.76,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G101V D112L S164L",3
"lib2","SARS-CoV-2","AGTTCAGCACCGCTTT",9,114.5,9.73,-1.1,0.06,2.49,1.04,0,">1 nonsynonymous","C6I N64I V153E",3
"lib2","SARS-CoV-2","AGTTCATAAAACGCGA",6,25.5,6.28,-4.56,0.52,1.5,1.15,0.02,">1 nonsynonymous","S43P G86C W106N P149G",4
"lib2","SARS-CoV-2","AGTTCATATAAAACGA",3,49.17,6.27,-4.56,0.62,1.5,1.19,0.02,">1 nonsynonymous","W106L G166L",2
"lib2","SARS-CoV-2","AGTTCATGCCGACTTT",5,67.07,10.73,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","R27D",1
"lib2","SARS-CoV-2","AGTTCATGTACAATAA",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V D90H W106L F167Y",4
"lib2","SARS-CoV-2","AGTTCATTGTAAGATT",7,30.71,6,-4.84,2,2.13,1.14,0.02,">1 nonsynonymous","V65E P82S K114L L125V E154V",5
"lib2","SARS-CoV-2","AGTTCCAACACACGCA",12,299.91,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S147Y E154F Y159L T201N",4
"lib2","SARS-CoV-2","AGTTCCACATCAAGAA",6,163.46,8.85,-1.98,0.05,2.26,1.03,0,">1 nonsynonymous","D98W I142S",2
"lib2","SARS-CoV-2","AGTTCCACTTAATTGA",3,30.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23G R124A V173Q",3
"lib2","SARS-CoV-2","AGTTCCAGTCTAGTCC",7,137.08,10.87,0.04,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTCCATCTATCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90* G117L Q144R",3
"lib2","SARS-CoV-2","AGTTCCATTTCCCCGT",3,14.62,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","F44C D137Q E154S V173T L183V",5
"lib2","SARS-CoV-2","AGTTCCCAACCACTAT",2,17.41,8.02,-2.82,0.12,2.85,1,0.01,">1 nonsynonymous","K87I L125D",2
"lib2","SARS-CoV-2","AGTTCCCAAGTCTTAA",1,16.39,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","W23K R124C I142P Y159E",4
"lib2","SARS-CoV-2","AGTTCCCACGGTCCCG",1,2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N130I",1
"lib2","SARS-CoV-2","AGTTCCCGACTTTCAG",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S G166F G172L",3
"lib2","SARS-CoV-2","AGTTCCCGATTTATAT",15,65.66,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F12V R73I D112L F185T",4
"lib2","SARS-CoV-2","AGTTCCGAAAAGAAAT",5,64.81,9.28,-1.56,0.06,2.9,1.08,0,">1 nonsynonymous","S45T Y119N T140F",3
"lib2","SARS-CoV-2","AGTTCCGAGATAACCC",11,191.62,10.36,-0.47,0.04,2.94,1.02,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","AGTTCCGGAGGCCAAA",2,69.69,10.79,-0.05,0.04,2.94,1.08,0,">1 nonsynonymous","T55L K198L",2
"lib2","SARS-CoV-2","AGTTCCGTACTAACAA",2,6.19,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I2T T15E F44H I72K Y93R N130C",6
"lib2","SARS-CoV-2","AGTTCCTATTCGGGCC",2,31.43,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F70L G86I L95A N120L",4
"lib2","SARS-CoV-2","AGTTCCTGCATTATCC",1,39.08,10.2,-0.64,0.04,2.89,1,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","AGTTCGCACAGACGTT",12,334.56,10.05,-0.78,0.05,2.68,1.04,0,">1 nonsynonymous","I28V V181I",2
"lib2","SARS-CoV-2","AGTTCGCCAAAGAAAC",10,69.3,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","K56Y R124T E141Q Q168G",4
"lib2","SARS-CoV-2","AGTTCGCCAGAGAACG",3,89.71,7.13,-3.71,0.24,1.5,1.1,0.01,">1 nonsynonymous","K26S T55M G146L",3
"lib2","SARS-CoV-2","AGTTCGCTACCAATTT",3,63.79,8.55,-2.28,0.11,2.15,1.05,0,">1 nonsynonymous","N107H T140N",2
"lib2","SARS-CoV-2","AGTTCGCTATCACTAA",14,8.65,NA,NA,NA,NA,NA,NA,"stop","I104* L122A F156T",3
"lib2","SARS-CoV-2","AGTTCGGCATCGGTAT",1,27.63,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","AGTTCGGTACCAAAAG",15,3.57,NA,NA,NA,NA,NA,NA,"stop","S41A N58S P82R W106*",4
"lib2","SARS-CoV-2","AGTTCGTAACTATACT",2,27.14,6.63,-4.21,0.27,2,1.18,0.01,">1 nonsynonymous","R127H G155F",2
"lib2","SARS-CoV-2","AGTTCTAAACCTATAG",10,67.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10V L60S Q168P",3
"lib2","SARS-CoV-2","AGTTCTAATAACCTAT",2,53.44,10.74,-0.09,0.03,2.94,1.05,0,"1 nonsynonymous","G116E",1
"lib2","SARS-CoV-2","AGTTCTAGAAACTGGA",19,370.9,10.36,-0.48,0.03,2.93,1.07,0,">1 nonsynonymous","A42S L122K Y143L",3
"lib2","SARS-CoV-2","AGTTCTAGACGCTAAT",6,33.43,9.54,-1.3,0.12,1.71,1.16,0.01,">1 nonsynonymous","T3I P54V T63V Q84F",4
"lib2","SARS-CoV-2","AGTTCTAGAGGCGGCA",7,11.73,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S19G S41K G83S V103L L125W",5
"lib2","SARS-CoV-2","AGTTCTAGATATAAAG",1,12.94,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","N1Q G86L N92M",3
"lib2","SARS-CoV-2","AGTTCTAGGTAAATAA",4,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57I I104R V182C",3
"lib2","SARS-CoV-2","AGTTCTATCCACGGAA",1,41.43,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C31Y Y39E L60I W106R Y121L",5
"lib2","SARS-CoV-2","AGTTCTCAACCAACTT",1,19.79,9.34,-1.5,0.21,1.73,1.22,0.02,">1 nonsynonymous","W106L Q144P P149E",3
"lib2","SARS-CoV-2","AGTTCTCAAGCACTAC",2,56.02,6.26,-4.58,0.66,1.5,1.1,0.02,">1 nonsynonymous","E10M Y35W P82W G174N",4
"lib2","SARS-CoV-2","AGTTCTCCGATATCAA",2,2.54,NA,NA,NA,NA,NA,NA,"stop","D68* R127L K128Y",3
"lib2","SARS-CoV-2","AGTTCTCGAGAACGGG",4,63.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6Y V52S R136A G146K G166V",5
"lib2","SARS-CoV-2","AGTTCTCGCGACTTAC",12,2.13,NA,NA,NA,NA,NA,NA,"stop","N58S V103* L162* G174L L187A K199G",6
"lib2","SARS-CoV-2","AGTTCTGCCCCAATGA",30,1008.45,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R16D P54V P169N P177L",4
"lib2","SARS-CoV-2","AGTTCTGTACAAAGTT",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M T46C P161M Y178L",4
"lib2","SARS-CoV-2","AGTTCTTCCCTATCCT",3,21.85,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","L57C I88F I104T",3
"lib2","SARS-CoV-2","AGTTCTTGGAATGTAA",13,102.03,6,-4.84,2,1.5,1.39,0.03,">1 nonsynonymous","V11P L38N G174R A190C",4
"lib2","SARS-CoV-2","AGTTCTTTCACCGACC",8,0.63,NA,NA,NA,NA,NA,NA,"stop","P161* Y175*",2
"lib2","SARS-CoV-2","AGTTCTTTTTCTAGAC",1,55.07,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F17P V37T F44R K87A L122C A145C T201V",7
"lib2","SARS-CoV-2","AGTTGAAAAGAACTAG",5,22.97,9.68,-1.15,0.17,2.14,1.07,0.01,">1 nonsynonymous","T15R S45C G146A",3
"lib2","SARS-CoV-2","AGTTGAAACCCTCGCA",18,482.63,10.6,-0.24,0.03,2.93,1.04,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","AGTTGAAAGGCATACC",21,386.24,10.78,-0.05,0.02,2.94,1.07,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","AGTTGAAATATGCTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","T15Y I104*",2
"lib2","SARS-CoV-2","AGTTGAAATGTAACCC",6,1.48,NA,NA,NA,NA,NA,NA,"stop","A14V S53C I138S G152H Q176*",5
"lib2","SARS-CoV-2","AGTTGAACAAAAACTT",2,88.62,10.72,-0.12,0.03,2.93,1.05,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","AGTTGAACAAGAAGCC",7,122.5,10.06,-0.78,0.03,2.87,1.04,0,">1 nonsynonymous","S45N Y123R G152Q",3
"lib2","SARS-CoV-2","AGTTGAACATTAAACA",6,74.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S53E L131W V173S V180G",4
"lib2","SARS-CoV-2","AGTTGAACCCCCTTGC",2,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I S19Y F99H",3
"lib2","SARS-CoV-2","AGTTGAACGTTGATTG",2,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L C49D T140D R179L",4
"lib2","SARS-CoV-2","AGTTGAAGAATATTCC",5,220.41,10.08,-0.76,0.03,2.95,1.05,0,"1 nonsynonymous","N118D",1
"lib2","SARS-CoV-2","AGTTGAATCTCACGAA",6,97.7,10.54,-0.29,0.05,2.94,1,0,">1 nonsynonymous","V77M T85S",2
"lib2","SARS-CoV-2","AGTTGACAGAATAGTG",11,172.02,10.82,-0.01,0.04,2.93,1.07,0,">1 nonsynonymous","K128R T201H",2
"lib2","SARS-CoV-2","AGTTGACATATAAGCC",4,53.19,8.14,-2.69,0.12,1.66,1.14,0.01,">1 nonsynonymous","C6N D34E Y178V",3
"lib2","SARS-CoV-2","AGTTGACATCCTCAAT",6,167.37,10.59,-0.25,0.02,2.94,1.05,0,">1 nonsynonymous","G9T I138N V194I",3
"lib2","SARS-CoV-2","AGTTGACCTAATGAAG",3,20.22,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6A V37N C49D",3
"lib2","SARS-CoV-2","AGTTGACCTTCGGCCA",5,25.66,9.31,-1.53,0.13,2.47,1.07,0.01,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","AGTTGACGAACCAGTT",7,40.02,6.65,-4.19,0.41,1.5,1.1,0.02,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","AGTTGACTAGAATTTA",4,3.62,NA,NA,NA,NA,NA,NA,"stop","V71* V180R",2
"lib2","SARS-CoV-2","AGTTGAGAACGTGACT",7,100.02,10.82,-0.01,0.02,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTGAGACAATGGAT",2,62.96,10.55,-0.28,0.04,2.96,1.02,0,">1 nonsynonymous","A33F P96R",2
"lib2","SARS-CoV-2","AGTTGAGACCCGCATT",3,24.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29Q A105Y R179S",3
"lib2","SARS-CoV-2","AGTTGAGATAAATTGA",10,133.94,8.73,-2.11,0.08,1.59,1.08,0,">1 nonsynonymous","F12E V115F",2
"lib2","SARS-CoV-2","AGTTGAGGGAATCAAC",3,42.48,10.84,0.01,0.04,2.94,1.07,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","AGTTGAGTCCGCGTGA",7,110.13,10.53,-0.3,0.04,2.98,1.03,0,">1 nonsynonymous","I2T Y39G C61T Q84S",4
"lib2","SARS-CoV-2","AGTTGAGTTAGTGTAC",12,3.27,NA,NA,NA,NA,NA,NA,"stop","A81K E154* G174V",3
"lib2","SARS-CoV-2","AGTTGAGTTTAAACTG",2,78.06,10.15,-0.68,0.1,2.39,1.05,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","AGTTGATAATCAGACT",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125M D137Y",2
"lib2","SARS-CoV-2","AGTTGATCAAATAGAA",13,152.35,10.69,-0.14,0.03,2.92,1.08,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","AGTTGATCATTGTAGC",15,156.34,10.79,-0.05,0.05,2.92,1.09,0,">1 nonsynonymous","R78S K198S",2
"lib2","SARS-CoV-2","AGTTGATGGACCCGTG",2,26.07,10.03,-0.81,0.09,2.71,1,0,">1 nonsynonymous","S139I P149E",2
"lib2","SARS-CoV-2","AGTTGATTGAAAAGCC",1,24.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9W L60Y V77G P133R P161S G166V E186N",7
"lib2","SARS-CoV-2","AGTTGCAACATAGATA",16,49.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V77L P82F D98V",3
"lib2","SARS-CoV-2","AGTTGCAATGTGCATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Y A89K T170I",3
"lib2","SARS-CoV-2","AGTTGCAATTAACGCA",3,51.39,8.47,-2.36,0.2,1.5,1.02,0.02,">1 nonsynonymous","R16K F99C",2
"lib2","SARS-CoV-2","AGTTGCACAATTTGAA",8,104.13,9.56,-1.27,0.14,1.74,1.13,0.01,">1 nonsynonymous","R25Q S53R",2
"lib2","SARS-CoV-2","AGTTGCACCGGTTACC",6,117.61,10.33,-0.51,0.04,2.84,1.08,0,">1 nonsynonymous","E10M Y50F",2
"lib2","SARS-CoV-2","AGTTGCATTACAATTC",1,6.24,11.17,0.33,0.19,2.87,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","AGTTGCCACTCCAAGT",6,124.22,9.87,-0.97,0.08,2.33,1.04,0,">1 nonsynonymous","F8L S53Y L60Y A89G",4
"lib2","SARS-CoV-2","AGTTGCCATAAAAGAA",7,187.04,9.71,-1.12,0.05,2.77,1.11,0,"1 nonsynonymous","A145K",1
"lib2","SARS-CoV-2","AGTTGCCGAACTATAT",5,68.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N92I W106Q K128F",3
"lib2","SARS-CoV-2","AGTTGCGAAAAAGACT",10,48.05,7.28,-3.56,0.3,1.5,1.08,0.03,">1 nonsynonymous","C6W V52K T63V",3
"lib2","SARS-CoV-2","AGTTGCGCAAAGCCCC",2,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y S41R P96T V103P S113V Y119V I142L G152R",8
"lib2","SARS-CoV-2","AGTTGCTTAATTTTAT",5,23.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8I N13L Y66N D90L",4
"lib2","SARS-CoV-2","AGTTGGAAAGTTCGGG",2,43.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6Y N107S L162R T201Q",4
"lib2","SARS-CoV-2","AGTTGGAAGGCTGCAC",10,299.9,10.78,-0.06,0.05,2.92,1.09,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","AGTTGGAATTACTAAT",3,64.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E135H F167D",2
"lib2","SARS-CoV-2","AGTTGGACGTAACACA",17,103.38,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S45C V103S V115D G155S",4
"lib2","SARS-CoV-2","AGTTGGACTCAGTTAG",5,46.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T85P L95R",2
"lib2","SARS-CoV-2","AGTTGGAGACGACGTC",5,149.27,10.75,-0.09,0.04,2.92,1.05,0,"1 nonsynonymous","A33G",1
"lib2","SARS-CoV-2","AGTTGGAGCCCCACAG",5,25.62,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6L S45W C102L V115T N157I G172V",6
"lib2","SARS-CoV-2","AGTTGGCGACATCAGG",10,177.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N107R N120V R127G Y178S",4
"lib2","SARS-CoV-2","AGTTGGCTTAAGCAGC",3,69.25,10.81,-0.02,0.05,2.98,1.02,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","AGTTGGCTTATTATTC",12,74.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G83D Q84R S113I E141W S184L",5
"lib2","SARS-CoV-2","AGTTGGGATTACGCTA",2,40.84,9.84,-1,0.09,2.52,1,0,">1 nonsynonymous","T15F K48V",2
"lib2","SARS-CoV-2","AGTTGGGGCGTAGTAG",1,11.64,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","L57R D97S K114V G152F",4
"lib2","SARS-CoV-2","AGTTGGGTCTAAGAGT",4,115.85,10.76,-0.08,0.03,2.95,1.06,0,">1 nonsynonymous","A33F F44Y",2
"lib2","SARS-CoV-2","AGTTGGTATAAATGAC",2,21.53,9.07,-1.76,0.17,1.81,1.04,0.01,">1 nonsynonymous","S69E T201E",2
"lib2","SARS-CoV-2","AGTTGGTGAGAAGCAA",1,7.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N64L I88K K198E",3
"lib2","SARS-CoV-2","AGTTGGTGAGAATCAT",10,2.4,NA,NA,NA,NA,NA,NA,"stop","C61S N118*",2
"lib2","SARS-CoV-2","AGTTGTAAAAAACGCA",3,11.1,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","G9V P54G Q84W R127T V173S",5
"lib2","SARS-CoV-2","AGTTGTATGACCACTG",3,56.14,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39L Y121V R136F Q168T Y175S",5
"lib2","SARS-CoV-2","AGTTGTCACACTAACA",5,15.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103G G152M G172K",3
"lib2","SARS-CoV-2","AGTTGTCATAGCCAGA",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90E S129C E135R E141Q H189T",5
"lib2","SARS-CoV-2","AGTTGTCATATCAACC",8,131.76,10.64,-0.19,0.03,2.89,1.04,0,">1 nonsynonymous","S45Q D97P N110R",3
"lib2","SARS-CoV-2","AGTTGTCATTATTAAT",1,17.11,9.04,-1.8,0.06,1.91,1.09,0,">1 nonsynonymous","A89C R136V",2
"lib2","SARS-CoV-2","AGTTGTGACAGTTGAA",5,84.76,10.86,0.02,0.04,2.93,1.09,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","AGTTGTGATTGCAAGG",15,232.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S N120G F134A S147I",4
"lib2","SARS-CoV-2","AGTTGTTAAGCATAGT",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87C Q144H",2
"lib2","SARS-CoV-2","AGTTGTTAGGACCGCA",2,20.29,7.9,-2.93,0.58,1.5,1.06,0.08,">1 nonsynonymous","G51L K56F N118S",3
"lib2","SARS-CoV-2","AGTTGTTCAAGTGAAA",2,18.74,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","W23S I142T Y178V",3
"lib2","SARS-CoV-2","AGTTGTTCCAGTAGAA",7,117.68,10.34,-0.5,0.04,2.9,1.09,0,"1 nonsynonymous","A145I",1
"lib2","SARS-CoV-2","AGTTGTTGAAGCAGTT",4,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y N92Y R179C E186F",4
"lib2","SARS-CoV-2","AGTTGTTTAACCTCTC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S53* K87T Y143Q",3
"lib2","SARS-CoV-2","AGTTTAAAGGCTCCCT",20,135.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16G F47H D98S G117S Y159S",5
"lib2","SARS-CoV-2","AGTTTAAAGTTACAGT",9,99.88,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","C6V D97M Y143T G155T",4
"lib2","SARS-CoV-2","AGTTTAAATAACGTTA",5,133.1,10.81,-0.03,0.05,2.89,1.11,0,"1 nonsynonymous","G9T",1
"lib2","SARS-CoV-2","AGTTTAACTAATGAGA",4,59.98,10.51,-0.33,0.03,2.95,1.06,0,">1 nonsynonymous","G9W A18Y",2
"lib2","SARS-CoV-2","AGTTTAACTAGACTAC",5,79.52,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S36G S45C A67D N120E I138F",5
"lib2","SARS-CoV-2","AGTTTAAGTCGGAAAC",3,6.08,10.87,0.04,0.1,2.73,1.29,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","AGTTTAATATGTTGTG",6,1.73,NA,NA,NA,NA,NA,NA,"stop","S53V N110* G174S",3
"lib2","SARS-CoV-2","AGTTTAATCCTTCGTG",7,201.66,8.92,-1.92,0.05,2.82,1.09,0,">1 nonsynonymous","Y39P T55M K114P",3
"lib2","SARS-CoV-2","AGTTTACACACATTAA",1,26.31,9.88,-0.95,0.14,2.17,1.05,0.01,">1 nonsynonymous","D59S N64P K94C",3
"lib2","SARS-CoV-2","AGTTTACCAAAACATA",6,91.54,9.42,-1.42,0.07,1.83,1.09,0,">1 nonsynonymous","N4H Q84W G116L",3
"lib2","SARS-CoV-2","AGTTTACTCGAGAACA",4,30.23,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31Q K87S E135W",3
"lib2","SARS-CoV-2","AGTTTACTGATTTATA",5,25.83,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","C6L A42V A89T P96N",4
"lib2","SARS-CoV-2","AGTTTACTTATCCCAG",2,11.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L L162K T201V",3
"lib2","SARS-CoV-2","AGTTTACTTCAGAAAA",6,0.44,NA,NA,NA,NA,NA,NA,"stop","F99A Y119L G166* L188T K199Y",5
"lib2","SARS-CoV-2","AGTTTACTTCCCCGAA",4,41.1,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D68W D112I S147Y F156T",4
"lib2","SARS-CoV-2","AGTTTACTTCTTTTGG",10,121.36,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","G9R C61V Y93V C150A L183V",5
"lib2","SARS-CoV-2","AGTTTACTTTAACGTG",3,35.02,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","G86V N118M P149C G174K",4
"lib2","SARS-CoV-2","AGTTTACTTTCGCTAG",4,25.47,10.84,0,0.08,2.94,1.05,0,"1 nonsynonymous","K132N",1
"lib2","SARS-CoV-2","AGTTTAGACATCGCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","D137* N151L N157K",3
"lib2","SARS-CoV-2","AGTTTAGACTACCAAC",1,0.47,NA,NA,NA,NA,NA,NA,"stop","Y21S K114H S139*",3
"lib2","SARS-CoV-2","AGTTTAGAGTATCGTT",15,4.64,NA,NA,NA,NA,NA,NA,"stop","V11S G101T Q144K F160*",4
"lib2","SARS-CoV-2","AGTTTAGAGTATTTGA",2,25.33,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V11S K87W G155Y",3
"lib2","SARS-CoV-2","AGTTTAGATGGTCAGA",13,146.15,8.72,-2.12,0.24,1.5,1,0.03,">1 nonsynonymous","F12D Y35K",2
"lib2","SARS-CoV-2","AGTTTAGGTTATCAAT",2,28.61,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N1K T55R G101V",3
"lib2","SARS-CoV-2","AGTTTAGTTACAAAAT",3,38.06,7.21,-3.63,0.29,1.5,1.21,0.02,">1 nonsynonymous","T3L N120C G152T G166L",4
"lib2","SARS-CoV-2","AGTTTAGTTTAACCTG",6,63.49,6.51,-4.32,0.39,1.5,1.19,0.01,"1 nonsynonymous","C102T",1
"lib2","SARS-CoV-2","AGTTTATAAAACCAAG",19,157.74,8.05,-2.78,0.2,1.5,1.03,0.01,">1 nonsynonymous","V32T E135N P161S",3
"lib2","SARS-CoV-2","AGTTTATAATAACATA",4,72.62,10.73,-0.1,0.05,2.88,1.1,0,"1 nonsynonymous","Y66N",1
"lib2","SARS-CoV-2","AGTTTATGACAGAATG",1,58.69,10.81,-0.03,0.06,2.95,1.07,0,"1 nonsynonymous","V115A",1
"lib2","SARS-CoV-2","AGTTTCAAAACCGATG",6,85.32,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I88A P177L",2
"lib2","SARS-CoV-2","AGTTTCAAATAGCAAT",6,120.67,10.84,0.01,0.07,2.87,1.09,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","AGTTTCAACGATGTCG",2,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","AGTTTCAAGCTACACC",1,21.82,8.78,-2.06,0.07,2.7,1.1,0,">1 nonsynonymous","Y119L T140G",2
"lib2","SARS-CoV-2","AGTTTCACTACTTCAT",2,2.24,NA,NA,NA,NA,NA,NA,"stop","Y35* P96G",2
"lib2","SARS-CoV-2","AGTTTCAGCTTGCCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124V P197A",2
"lib2","SARS-CoV-2","AGTTTCATAATTGAAA",18,2.41,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","AGTTTCATCTCCTCGA",1,39.66,8.36,-2.48,0.12,2.12,1.03,0.01,">1 nonsynonymous","Y165T T201E",2
"lib2","SARS-CoV-2","AGTTTCATTCACACAA",6,0.07,NA,NA,NA,NA,NA,NA,"stop","R16* Y21A T55Y",3
"lib2","SARS-CoV-2","AGTTTCCAGAACCAGG",3,59.11,9.86,-0.98,0.06,2.87,1.02,0,">1 nonsynonymous","C6F G155S",2
"lib2","SARS-CoV-2","AGTTTCCGCCTGATCT",3,81.58,10.31,-0.53,0.04,2.84,1,0,">1 nonsynonymous","S43T Y50F F134R",3
"lib2","SARS-CoV-2","AGTTTCCGGTTAAAAA",6,179.34,10.83,0,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTTCCGTACAACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15D A42* Y91N",3
"lib2","SARS-CoV-2","AGTTTCCTCGTTTAAG",8,26.94,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C6Q E135S E141G G146E",4
"lib2","SARS-CoV-2","AGTTTCGATTAATGAA",8,0.04,NA,NA,NA,NA,NA,NA,"stop","Y143V P161* G172F",3
"lib2","SARS-CoV-2","AGTTTCGCTTAGGTTA",4,48.51,9.82,-1.02,0.06,2.02,1.03,0,">1 nonsynonymous","T15N P133C",2
"lib2","SARS-CoV-2","AGTTTCGGGACTCGGG",3,7.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12E S41A F47S G83V T201R",5
"lib2","SARS-CoV-2","AGTTTCGGGATATGCA",11,57.67,10.92,0.08,0.06,2.94,1.06,0,">1 nonsynonymous","I2K Q84S",2
"lib2","SARS-CoV-2","AGTTTCGTAGTGAACG",1,12.87,10.91,0.07,0.07,2.9,1.12,0,">1 nonsynonymous","R16K D97N Y175W",3
"lib2","SARS-CoV-2","AGTTTCGTGCGCAAAT",6,59.64,7.22,-3.61,0.3,1.5,1.22,0.02,">1 nonsynonymous","T3S E10S W23G V153L",4
"lib2","SARS-CoV-2","AGTTTCTCTATGAATG",5,105.16,10.36,-0.48,0.08,2.71,1.09,0,">1 nonsynonymous","T55P N58L",2
"lib2","SARS-CoV-2","AGTTTCTCTGACAACT",5,172.77,8.17,-2.67,0.14,2.34,1.09,0.01,">1 nonsynonymous","Y143K T201M",2
"lib2","SARS-CoV-2","AGTTTCTGAGCCACAA",9,168.55,10.12,-0.72,0.06,2.49,1.05,0,">1 nonsynonymous","R27A N40V K56S",3
"lib2","SARS-CoV-2","AGTTTCTTTTAGTAGA",11,144.25,10.19,-0.65,0.04,2.8,1,0,">1 nonsynonymous","F17M P54T",2
"lib2","SARS-CoV-2","AGTTTGACAAATTAAA",8,33.68,10.01,-0.82,0.07,2.4,1.06,0,">1 nonsynonymous","S41L K56N K114E Y123L",4
"lib2","SARS-CoV-2","AGTTTGAGAAAGAACT",3,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L K94E V103S P169I G174E",5
"lib2","SARS-CoV-2","AGTTTGATCTTTATCG",9,119.16,6.04,-4.8,0.73,1.5,1.15,0.01,">1 nonsynonymous","T55L N64T I104M Y119E F134C N151V",6
"lib2","SARS-CoV-2","AGTTTGCCCTGCGGCT",1,37,6.94,-3.89,0.37,1.5,1.19,0.04,">1 nonsynonymous","R25L S53R",2
"lib2","SARS-CoV-2","AGTTTGCTTGGAGAAC",7,135.21,9.16,-1.67,0.08,1.86,1.09,0,">1 nonsynonymous","L57E D90Y L187V",3
"lib2","SARS-CoV-2","AGTTTGGATGACCAAT",2,129.93,10.33,-0.5,0.06,2.84,1.14,0,">1 nonsynonymous","T63D R78E T100N",3
"lib2","SARS-CoV-2","AGTTTGGTTGCAAACG",7,137.74,10.81,-0.02,0.05,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","AGTTTGTAGAGTCGAT",7,17.97,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","S113A G172L",2
"lib2","SARS-CoV-2","AGTTTGTATGGTGTGT",11,23.62,9.74,-1.09,0.09,2.81,1.04,0,">1 nonsynonymous","C6S S45R K56W G83F G155F",5
"lib2","SARS-CoV-2","AGTTTGTCATTTTCAT",2,6.2,10.35,-0.48,0.09,3,1,0,">1 nonsynonymous","R27G E154S",2
"lib2","SARS-CoV-2","AGTTTGTTTTAAGTGC",5,61.58,10.05,-0.78,0.06,2.6,1.02,0,">1 nonsynonymous","N40Y Y66F N120C I138T",4
"lib2","SARS-CoV-2","AGTTTTAACTCATCCA",6,76.77,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86D C158R",2
"lib2","SARS-CoV-2","AGTTTTAAGCCGTGAC",1,5.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R179G P197T",2
"lib2","SARS-CoV-2","AGTTTTACACAAACAA",13,90.91,10.74,-0.1,0.05,2.92,1.06,0,">1 nonsynonymous","A81G T201L",2
"lib2","SARS-CoV-2","AGTTTTACATGCACGA",2,16.17,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","Y123D",1
"lib2","SARS-CoV-2","AGTTTTACCATAACCA",2,36.96,10.71,-0.13,0.06,2.95,1.07,0,"1 nonsynonymous","V173C",1
"lib2","SARS-CoV-2","AGTTTTACGATGACCA",8,162.83,10.9,0.06,0.04,2.88,1.12,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","AGTTTTAGAACCCCCT",1,56.12,8.84,-1.99,0.18,1.6,1.1,0.01,">1 nonsynonymous","G83S W106K Y178F",3
"lib2","SARS-CoV-2","AGTTTTATGCACGATA",7,29.65,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N118I K132R P149H N157P",4
"lib2","SARS-CoV-2","AGTTTTCAAAGTATCC",3,2.88,NA,NA,NA,NA,NA,NA,"stop","Y35* Y91E",2
"lib2","SARS-CoV-2","AGTTTTCGGTATACTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S139T Q163*",2
"lib2","SARS-CoV-2","AGTTTTCTAATACAAA",1,2.05,NA,NA,NA,NA,NA,NA,"stop","Y91I L183* P197Y",3
"lib2","SARS-CoV-2","AGTTTTCTTATTATAG",5,0.44,NA,NA,NA,NA,NA,NA,"stop","L5I K26L D34F F62I D98T Q144*",6
"lib2","SARS-CoV-2","AGTTTTGATAAATATA",5,30.71,6.09,-4.75,0.71,1.5,1.16,0.01,">1 nonsynonymous","I104M P149R C158M",3
"lib2","SARS-CoV-2","AGTTTTGATAAGTAAA",5,187.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C158A G174V",2
"lib2","SARS-CoV-2","AGTTTTGCACACTACG",4,0.07,NA,NA,NA,NA,NA,NA,"stop","I104Y Y119N Y143R K198*",4
"lib2","SARS-CoV-2","AGTTTTGGGAAATGAG",1,9.49,10.89,0.05,0.08,2.88,1.12,0.01,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","AGTTTTTACGGTCATA",5,24.4,10.79,-0.05,0.12,2.8,1.13,0,"1 nonsynonymous","I138E",1
"lib2","SARS-CoV-2","AGTTTTTAGTAAACAC",3,44.37,6,-4.84,1.35,1.5,1.07,0.02,">1 nonsynonymous","G9L N92V E141A G196T",4
"lib2","SARS-CoV-2","AGTTTTTCATCGATCG",19,126.3,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5D N92I",2
"lib2","SARS-CoV-2","AGTTTTTCGGTGCGCC",4,59.99,10.64,-0.19,0.03,2.99,1.04,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","AGTTTTTCTAGTAGGG",3,16.68,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D98V N107Q K132L P133T",4
"lib2","SARS-CoV-2","AGTTTTTGACGTTTAC",1,0.08,NA,NA,NA,NA,NA,NA,"stop","S53* K87T Y143Q",3
"lib2","SARS-CoV-2","AGTTTTTTTAAAAACC",6,13.69,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A42Q G86E D112N G166L S200W",5
"lib2","SARS-CoV-2","ATAAAAAAAACCTAAA",7,113.16,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","C6M S29W T85W C102N Q168K",5
"lib2","SARS-CoV-2","ATAAAAAAACAAAAGC",8,84.86,6,-4.84,1.31,1.5,1.09,0.01,">1 nonsynonymous","A67S P96C Y175I",3
"lib2","SARS-CoV-2","ATAAAAAAAGAAGGAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L N13L D97I Q144F",4
"lib2","SARS-CoV-2","ATAAAAAAATAAGGAA",4,1.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K199D",1
"lib2","SARS-CoV-2","ATAAAAAACAAATCGA",2,26.15,9.29,-1.54,0.12,2.83,1.11,0,">1 nonsynonymous","L5Y N24L L125N",3
"lib2","SARS-CoV-2","ATAAAAAACAGTCCTC",6,23.84,6.2,-4.63,0.52,3,1.14,0.01,">1 nonsynonymous","I2H T140W Y165R L183R T201I",5
"lib2","SARS-CoV-2","ATAAAAAACGCGAACA",5,52.81,10.82,-0.01,0.04,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAAAACGTGTTCG",2,27.77,10.67,-0.17,0.03,2.97,1.05,0,"1 nonsynonymous","T15A",1
"lib2","SARS-CoV-2","ATAAAAAACTATATAA",7,41.98,10.12,-0.71,0.09,2.74,1.07,0,">1 nonsynonymous","D59N L122V I142H",3
"lib2","SARS-CoV-2","ATAAAAAACTCATTGT",2,11.97,6.09,-4.75,0.41,3,1.08,0,">1 nonsynonymous","I72P V115L E135Q",3
"lib2","SARS-CoV-2","ATAAAAAAGGGACCAT",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22G Y93K T140L",3
"lib2","SARS-CoV-2","ATAAAAAATACAGACA",7,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E V103A E135S C158S S200Q",5
"lib2","SARS-CoV-2","ATAAAAAATAGTTATA",9,73.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P L60T K87F D90Y I142V",5
"lib2","SARS-CoV-2","ATAAAAAATATATTAA",19,234.65,9.58,-1.25,0.08,1.92,1.06,0,"1 nonsynonymous","L162Q",1
"lib2","SARS-CoV-2","ATAAAAAATCCGCAAG",2,22.17,10.7,-0.14,0.09,2.92,1.08,0,"1 nonsynonymous","E10N",1
"lib2","SARS-CoV-2","ATAAAAAATGAAATAA",2,58.14,9.42,-1.42,0.15,1.87,1.09,0.01,">1 nonsynonymous","T3L A18L L122V",3
"lib2","SARS-CoV-2","ATAAAAAATGAGGCAT",4,37.15,10.32,-0.52,0.06,2.83,1,0,">1 nonsynonymous","F12V T140H",2
"lib2","SARS-CoV-2","ATAAAAACAACCTTAA",1,13.8,7.86,-2.97,0.45,1.5,1.13,0.04,"1 nonsynonymous","R124A",1
"lib2","SARS-CoV-2","ATAAAAACAATCCACG",12,194.51,9.83,-1,0.08,2.23,1.09,0,">1 nonsynonymous","L60H W106Y N151L",3
"lib2","SARS-CoV-2","ATAAAAACAATTAATA",3,8.92,10.21,-0.62,0.06,2.97,1.01,0,">1 nonsynonymous","N64Q A89T G174N",3
"lib2","SARS-CoV-2","ATAAAAACAGCCCTTT",5,51.73,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S45T N58I Q84K K94S N107P S113G K132C",7
"lib2","SARS-CoV-2","ATAAAAACCACAGGGT",2,9.61,8.87,-1.96,0.21,1.75,1.05,0.02,">1 nonsynonymous","F8V F12S",2
"lib2","SARS-CoV-2","ATAAAAACCACTACAA",7,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V P96F R136I",3
"lib2","SARS-CoV-2","ATAAAAACCTCACGTT",3,54.02,10.66,-0.18,0.05,2.92,1.08,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","ATAAAAACGATTGTAA",3,25.54,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35K D68R G86C W106R Y121T Y143Q C158P",7
"lib2","SARS-CoV-2","ATAAAAACTCAGTTAA",3,87.9,10.18,-0.65,0.04,2.98,1.05,0,">1 nonsynonymous","L5Q D75N K87T",3
"lib2","SARS-CoV-2","ATAAAAACTCATTCAA",3,80.86,10.15,-0.69,0.07,2.67,1,0,">1 nonsynonymous","A42L V180T L188H",3
"lib2","SARS-CoV-2","ATAAAAAGACTTCAGG",4,19.58,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","V37K G86F P149T",3
"lib2","SARS-CoV-2","ATAAAAAGATACGAAT",2,46.7,9.13,-1.71,0.08,2.83,1.16,0,"1 nonsynonymous","G146K",1
"lib2","SARS-CoV-2","ATAAAAAGCAGGTCAT",5,51.61,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","N4V I80S T140R",3
"lib2","SARS-CoV-2","ATAAAAAGCTACCTCA",3,15.08,9.04,-1.8,0.24,1.57,1.05,0.03,">1 nonsynonymous","T63Y F99H F156R",3
"lib2","SARS-CoV-2","ATAAAAAGCTATATGT",7,57.23,10.06,-0.78,0.06,2.76,1.07,0,">1 nonsynonymous","E10S Q84H V115Q",3
"lib2","SARS-CoV-2","ATAAAAAGGAAACAGA",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G N13I K56S G83V D90C F126I P133S",7
"lib2","SARS-CoV-2","ATAAAAAGGATGCGAT",5,129.53,10.72,-0.12,0.04,2.9,1.06,0,"1 nonsynonymous","P133A",1
"lib2","SARS-CoV-2","ATAAAAAGGCCACGAA",3,19.55,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9T S19Q K94H S108F G166A",5
"lib2","SARS-CoV-2","ATAAAAAGTAAAGGTG",2,23.24,10.7,-0.14,0.08,2.9,1.12,0,"1 nonsynonymous","A42H",1
"lib2","SARS-CoV-2","ATAAAAAGTCGGGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","D97* P169T V173L",3
"lib2","SARS-CoV-2","ATAAAAAGTTCTCTAT",4,21.54,8.83,-2.01,0.08,2.99,1.11,0,">1 nonsynonymous","Y119G G152C A192Y",3
"lib2","SARS-CoV-2","ATAAAAAGTTTAACCC",1,117.35,9.77,-1.06,0.06,2.05,1.04,0,">1 nonsynonymous","C49I N64C I138L",3
"lib2","SARS-CoV-2","ATAAAAAGTTTAGTCA",6,27.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90Y K114E R179L G196M",4
"lib2","SARS-CoV-2","ATAAAAATAAAAGATC",1,14.48,10.22,-0.62,0.08,2.84,1.01,0.01,">1 nonsynonymous","A18K F62M S139D",3
"lib2","SARS-CoV-2","ATAAAAATAACTAAAA",2,14.99,10.11,-0.72,0.07,2.7,1.01,0,">1 nonsynonymous","K56N L57R T100S V173L",4
"lib2","SARS-CoV-2","ATAAAAATAAGCCGGC",3,25.49,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S41V I72V K94Q F134L Y143L",5
"lib2","SARS-CoV-2","ATAAAAATAATATCGT",5,30.19,9.72,-1.12,0.08,2.5,1.08,0,">1 nonsynonymous","C6M S147Y",2
"lib2","SARS-CoV-2","ATAAAAATACATGAAG",1,5.97,6.26,-4.58,2,3,1.18,0.01,">1 nonsynonymous","G51H V77L F167S K199W",4
"lib2","SARS-CoV-2","ATAAAAATAGCAAAAA",8,154.2,10.82,-0.02,0.05,2.92,1.09,0,">1 nonsynonymous","V115I P197E",2
"lib2","SARS-CoV-2","ATAAAAATAGTGAACG",1,46.45,10.73,-0.11,0.05,2.99,1.02,0,">1 nonsynonymous","I2F T85A T100Y",3
"lib2","SARS-CoV-2","ATAAAAATATATCAAA",1,32.91,8.47,-2.36,0.25,1.5,1.2,0.02,">1 nonsynonymous","V11D D90G L125F S147P",4
"lib2","SARS-CoV-2","ATAAAAATATGATTGA",3,45.94,6,-4.84,2,3,1.13,0,">1 nonsynonymous","K56S N109D Y143S",3
"lib2","SARS-CoV-2","ATAAAAATCATAAAAA",1,5.01,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ATAAAAATCCCTTCCA",2,13.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12D A67I D90T G155R L162Y",5
"lib2","SARS-CoV-2","ATAAAAATCGCGAATG",3,13.13,7.76,-3.07,0.31,1.74,1.12,0.04,">1 nonsynonymous","V11M D68T G174N",3
"lib2","SARS-CoV-2","ATAAAAATGAAAACTT",5,84.39,9.13,-1.71,0.05,2.9,1.06,0,">1 nonsynonymous","N157H V173K",2
"lib2","SARS-CoV-2","ATAAAAATGTTATCGG",5,54.09,9.75,-1.08,0.08,2.36,1.09,0,">1 nonsynonymous","F12C A42M",2
"lib2","SARS-CoV-2","ATAAAAATTAAAACGA",4,2.87,NA,NA,NA,NA,NA,NA,"stop","F62A Y143L P161*",3
"lib2","SARS-CoV-2","ATAAAACAAAAAGCCA",7,85.44,10.66,-0.18,0.04,2.94,1.08,0,"1 nonsynonymous","L60W",1
"lib2","SARS-CoV-2","ATAAAACAAAAAGGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F T55P C158V",3
"lib2","SARS-CoV-2","ATAAAACAAAACCACG",2,60.71,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G83Q I88R F134E",3
"lib2","SARS-CoV-2","ATAAAACAAAGGTAAT",16,58.41,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C49S Y91L T201R",3
"lib2","SARS-CoV-2","ATAAAACAATAAACGA",3,25.51,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N1F V11I C31Y Q84D F167S",5
"lib2","SARS-CoV-2","ATAAAACAATCAGAAC",3,36.98,8.67,-2.17,0.11,2.91,1.04,0.01,"1 nonsynonymous","S113M",1
"lib2","SARS-CoV-2","ATAAAACAATTGGACC",2,16.34,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49N Q84L S139L V173I",4
"lib2","SARS-CoV-2","ATAAAACACCGACATT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","F70S W106* Y121S",3
"lib2","SARS-CoV-2","ATAAAACAGGCTATGA",9,26.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T3L G9D I80K G116A G174R P197T",6
"lib2","SARS-CoV-2","ATAAAACATTGTATTT",3,4.14,NA,NA,NA,NA,NA,NA,"stop","C6* Y50* G74A A89T",4
"lib2","SARS-CoV-2","ATAAAACCAAAATAGC",1,3.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAACCAAACATAT",13,166.35,10.4,-0.44,0.03,2.91,1.04,0,"1 nonsynonymous","F44P",1
"lib2","SARS-CoV-2","ATAAAACCCATGAAGC",8,13.07,9.71,-1.13,0.3,2.31,1.06,0.02,">1 nonsynonymous","A33Y R127D V173M",3
"lib2","SARS-CoV-2","ATAAAACCCCGCCGAA",6,60.46,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T46S T63Y V77M D90H D97Y Q168V",6
"lib2","SARS-CoV-2","ATAAAACCCGTAATGA",7,188.68,10.79,-0.05,0.05,2.96,1.06,0,">1 nonsynonymous","Y35I I138M",2
"lib2","SARS-CoV-2","ATAAAACCCGTGCATT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","W106I R136I P149*",3
"lib2","SARS-CoV-2","ATAAAACCCTAACAAA",1,29.48,10.29,-0.55,0.08,2.93,1,0,">1 nonsynonymous","K87I P197V",2
"lib2","SARS-CoV-2","ATAAAACCGAAAGAAC",1,11.86,6.11,-4.73,0.63,1.5,1.16,0.02,">1 nonsynonymous","N40G Y50A",2
"lib2","SARS-CoV-2","ATAAAACCGCATCATT",5,34.49,10.71,-0.12,0.06,2.91,1.12,0,"1 nonsynonymous","F160E",1
"lib2","SARS-CoV-2","ATAAAACCTAGCCTTT",5,122.86,10.57,-0.27,0.03,2.96,1.04,0,">1 nonsynonymous","G9D T15L D59R",3
"lib2","SARS-CoV-2","ATAAAACGAACATCAC",1,13.07,10.9,0.06,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAACGAAGTCAAA",10,223.2,9.47,-1.36,0.05,2.69,1.12,0,">1 nonsynonymous","A42G T148K P177S",3
"lib2","SARS-CoV-2","ATAAAACGCGTTACAT",6,49.88,8.28,-2.55,0.16,2.51,1.1,0.01,"1 nonsynonymous","Y175L",1
"lib2","SARS-CoV-2","ATAAAACGGATAAATC",6,119.68,9.33,-1.5,0.03,2.92,1.1,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","ATAAAACGTAGTTTAG",2,10.99,10.93,0.09,0.09,2.76,1.23,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","ATAAAACGTGAATTAG",5,16.27,6.86,-3.97,0.48,1.5,1.08,0.06,">1 nonsynonymous","C61P A105P C158I",3
"lib2","SARS-CoV-2","ATAAAACTACAGGAAA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F12* S53L N120F I138N P161R",5
"lib2","SARS-CoV-2","ATAAAACTACCCTGAT",8,30.4,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L183E",1
"lib2","SARS-CoV-2","ATAAAACTACGAGTAT",6,47.56,10.12,-0.72,0.06,2.68,1,0,">1 nonsynonymous","F44S K48L",2
"lib2","SARS-CoV-2","ATAAAACTAGGACAAG",13,2.43,NA,NA,NA,NA,NA,NA,"stop","A14* S19W P169G",3
"lib2","SARS-CoV-2","ATAAAACTCGAACAAC",5,105.73,11.1,0.26,0.05,2.94,1.05,0,">1 nonsynonymous","N120L Q163V",2
"lib2","SARS-CoV-2","ATAAAACTCGCTTATC",4,70.97,10.43,-0.41,0.06,2.83,1.05,0,">1 nonsynonymous","A42E T85L T140S",3
"lib2","SARS-CoV-2","ATAAAACTGACGACGA",1,19.77,9.96,-0.88,0.18,2.19,1.04,0.01,">1 nonsynonymous","L60R D97Q",2
"lib2","SARS-CoV-2","ATAAAACTGATGGCAA",2,22.01,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A18G L60T F99L",3
"lib2","SARS-CoV-2","ATAAAACTGTGACAAA",11,159.15,9.61,-1.23,0.04,2.84,1.03,0,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","ATAAAACTTAATACTA",4,110.37,10.63,-0.21,0.05,2.93,1.08,0,">1 nonsynonymous","A42V K132D",2
"lib2","SARS-CoV-2","ATAAAACTTGTTATTG",8,77.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y21M C61G I138P C150R",4
"lib2","SARS-CoV-2","ATAAAAGAAATGTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* E141D Q168D",3
"lib2","SARS-CoV-2","ATAAAAGAACCCACCA",4,25.71,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","S41V F47V G117R G155V",4
"lib2","SARS-CoV-2","ATAAAAGAAGGTCCAG",7,85.27,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C6S L95M Y123S E141W Y175P G196C",6
"lib2","SARS-CoV-2","ATAAAAGAATGGCTCA",1,31.99,8.74,-2.09,0.11,2.63,1.15,0.01,">1 nonsynonymous","A14R T100S T170G",3
"lib2","SARS-CoV-2","ATAAAAGACCTCTGCC",1,10.48,10.03,-0.81,0.18,2.65,1.23,0.01,">1 nonsynonymous","C6V F62W K198R",3
"lib2","SARS-CoV-2","ATAAAAGACGCAAATA",11,485.28,10.77,-0.07,0.03,2.94,1.07,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","ATAAAAGAGATTACCA",5,28.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89R T170R",2
"lib2","SARS-CoV-2","ATAAAAGAGTACTTAG",6,0.8,NA,NA,NA,NA,NA,NA,"stop","C49* N58S V153I",3
"lib2","SARS-CoV-2","ATAAAAGATGATCATT",1,33.9,10.8,-0.03,0.06,2.98,1.05,0,">1 nonsynonymous","Y39R P149D",2
"lib2","SARS-CoV-2","ATAAAAGATTCCTGAG",1,5.07,9.62,-1.22,0.23,3,1.05,0.01,">1 nonsynonymous","N120W T201H",2
"lib2","SARS-CoV-2","ATAAAAGCATGAACGT",7,83.26,9.73,-1.11,0.1,1.86,1.09,0,">1 nonsynonymous","A105N V153L",2
"lib2","SARS-CoV-2","ATAAAAGCCAATACAC",2,50.69,9.64,-1.2,0.12,1.95,1.04,0.01,">1 nonsynonymous","P7L A89G",2
"lib2","SARS-CoV-2","ATAAAAGCCTACAGTA",10,34.22,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","I104T R124V C158A P169W",4
"lib2","SARS-CoV-2","ATAAAAGCTTACCAAT",5,68.55,10.25,-0.58,0.06,2.85,1.03,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","ATAAAAGGAACTAAAA",10,24.94,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","A33S D68L V77M K199N",4
"lib2","SARS-CoV-2","ATAAAAGGAAGTTGAT",1,12.84,10.28,-0.56,0.09,2.82,1.14,0,">1 nonsynonymous","R27L P169A",2
"lib2","SARS-CoV-2","ATAAAAGGCTAGTTGT",2,7.3,10.86,0.02,0.08,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAAGGGCGTGTTT",5,39.46,6.06,-4.77,1.05,1.5,1.18,0.02,">1 nonsynonymous","S69I A81T",2
"lib2","SARS-CoV-2","ATAAAAGGGTTATCCA",3,37.78,9.03,-1.81,0.08,2.32,1.09,0,">1 nonsynonymous","G51A G146T",2
"lib2","SARS-CoV-2","ATAAAAGGTGTGGATC",1,14.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V77G N151I",2
"lib2","SARS-CoV-2","ATAAAAGTAATTGAAT",6,42.94,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","F8L Y93S",2
"lib2","SARS-CoV-2","ATAAAAGTAGTTCGAT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","L5W F12Y A33* N40F F44S D59G A105L K198M",8
"lib2","SARS-CoV-2","ATAAAAGTATATCATA",6,62.64,10.51,-0.33,0.06,2.92,1,0,">1 nonsynonymous","S43T G116N S184L",3
"lib2","SARS-CoV-2","ATAAAAGTATCGTCCC",2,21.84,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F44Q T170M R179C",3
"lib2","SARS-CoV-2","ATAAAAGTATTCCAAA",2,48.25,9,-1.84,0.21,1.5,1.12,0.02,">1 nonsynonymous","I28T A105S S184F",3
"lib2","SARS-CoV-2","ATAAAAGTCAGATAAG",1,13.2,10.32,-0.52,0.19,2.56,1.04,0.01,">1 nonsynonymous","E10Y P149H",2
"lib2","SARS-CoV-2","ATAAAAGTCCAAGTGG",1,17.67,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F12G Y50F F99H F167I",4
"lib2","SARS-CoV-2","ATAAAAGTCGCGACAA",8,111.81,10.93,0.09,0.09,2.85,1.02,0,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","ATAAAATAAAAATAAA",7,62.19,6,-4.84,1.76,2.2,1.12,0,">1 nonsynonymous","A22L G101I E135G Q168I",4
"lib2","SARS-CoV-2","ATAAAATAAACAATTT",2,19.6,10.87,0.04,0.08,2.96,1.07,0,">1 nonsynonymous","V37K G51N",2
"lib2","SARS-CoV-2","ATAAAATAAATACAGC",1,0.94,NA,NA,NA,NA,NA,NA,"stop","S45Q T63A I138*",3
"lib2","SARS-CoV-2","ATAAAATAACACTGGG",4,80.64,8.44,-2.4,0.13,2.07,1.09,0.01,"1 nonsynonymous","Y165A",1
"lib2","SARS-CoV-2","ATAAAATAACCGTAAT",5,2.07,NA,NA,NA,NA,NA,NA,"stop","L5N G9* S69W P149C",4
"lib2","SARS-CoV-2","ATAAAATAATGTCTAA",2,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","ATAAAATACAATAAAT",4,74.22,10.86,0.02,0.04,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAAATACACACTCA",4,46.02,8.19,-2.64,0.23,1.5,1.11,0.03,">1 nonsynonymous","T15D Y35K R127G",3
"lib2","SARS-CoV-2","ATAAAATACAGTGCGC",7,80.93,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y35I C150N G172R",3
"lib2","SARS-CoV-2","ATAAAATACCCGTAAA",1,14.76,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G86S S108D",2
"lib2","SARS-CoV-2","ATAAAATAGAAGTTCC",5,43.43,8.52,-2.31,0.12,2.89,1.09,0.01,">1 nonsynonymous","S129I N157M",2
"lib2","SARS-CoV-2","ATAAAATAGCGTTATC",4,20.43,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10Q S53E L95A T100N S113G G117D C158N",7
"lib2","SARS-CoV-2","ATAAAATATAATAAGA",3,45.29,10.75,-0.09,0.02,3,1,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","ATAAAATATAATCTTA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P K56A K199N",3
"lib2","SARS-CoV-2","ATAAAATATAGAATGT",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y K56H A105S N171I",4
"lib2","SARS-CoV-2","ATAAAATATCATTCTG",17,105.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F8G A18M F47T",3
"lib2","SARS-CoV-2","ATAAAATATCCTACTA",5,16.56,6.39,-4.44,0.63,1.5,1.21,0.03,">1 nonsynonymous","C61R L95A V103N T201R",4
"lib2","SARS-CoV-2","ATAAAATATTGTCCGT",6,39.86,9.51,-1.32,0.05,2.79,1.08,0,">1 nonsynonymous","N118T E154G",2
"lib2","SARS-CoV-2","ATAAAATCCAATACGG",6,22.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7A T15F I28A K48W G116N T201V",6
"lib2","SARS-CoV-2","ATAAAATCCATGTAGA",3,28.37,10.82,-0.02,0.07,2.82,1.2,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","ATAAAATCCTTTATCA",13,128.94,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G9L Y93P P133K R179G",4
"lib2","SARS-CoV-2","ATAAAATCGGGGGGCC",1,46.82,10.6,-0.23,0.06,2.94,1.05,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","ATAAAATCTAAGGTAA",5,31.95,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A14V F62I A89R G117V G146E",5
"lib2","SARS-CoV-2","ATAAAATCTATAACCT",18,144.19,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","L5D F12R T140E C150S G166M",5
"lib2","SARS-CoV-2","ATAAAATCTCCCTTAT",2,22.46,7.95,-2.89,0.34,1.5,1,0.04,">1 nonsynonymous","A67V A105V N118F T148H",4
"lib2","SARS-CoV-2","ATAAAATGAAAAGGAC",5,22.67,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","V52H N58Y I88E P96L V103S",5
"lib2","SARS-CoV-2","ATAAAATGCCCAGCCA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R D98L T148S",3
"lib2","SARS-CoV-2","ATAAAATGGTAACTAA",3,46.25,10.83,0,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAATGTAATATTC",9,34.76,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K26Q Y35N C61F W106P",4
"lib2","SARS-CoV-2","ATAAAATGTACAACCA",7,137.6,10.89,0.06,0.05,2.91,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAATGTCACAAAA",7,28.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C31W L131Q V173S",3
"lib2","SARS-CoV-2","ATAAAATGTGAAGACA",4,23.76,7.01,-3.83,0.33,1.5,1.14,0.03,">1 nonsynonymous","F8L D98G N118Q F126P P149N",5
"lib2","SARS-CoV-2","ATAAAATTAAACTAAG",4,6.24,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","L57H P177W",2
"lib2","SARS-CoV-2","ATAAAATTACATGCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y G116S",2
"lib2","SARS-CoV-2","ATAAAATTGAATGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3N D59* I88K",3
"lib2","SARS-CoV-2","ATAAAATTGAGCAACC",12,277.32,10.63,-0.21,0.02,2.96,1.04,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","ATAAAATTTAGTGCCT",2,36.13,9.92,-0.92,0.05,2.63,1.05,0,">1 nonsynonymous","R27S Y35K",2
"lib2","SARS-CoV-2","ATAAAATTTCTTGGCT",15,3.08,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","ATAAAATTTGAACCTG",3,11.04,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","F12L S41L Y121G",3
"lib2","SARS-CoV-2","ATAAACAAAAATAATT",3,29.75,6,-4.84,1.78,1.5,1.19,0.02,">1 nonsynonymous","S45K Y123N E186Y",3
"lib2","SARS-CoV-2","ATAAACAAAAGGTATG",7,109.29,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P7D P96L Y123E",3
"lib2","SARS-CoV-2","ATAAACAAAATGACCA",1,10.2,9.92,-0.91,0.1,2.76,1.18,0.01,">1 nonsynonymous","V11C V32H S41N P54I T201M",5
"lib2","SARS-CoV-2","ATAAACAACAATTGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","ATAAACAACCTTATAA",2,68.66,9.37,-1.47,0.09,2.84,1.17,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","ATAAACAACGCGACAA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G G86R",2
"lib2","SARS-CoV-2","ATAAACAACTCAGTTG",2,9.72,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","G86L C102S G117R L131A",4
"lib2","SARS-CoV-2","ATAAACAAGAAACAGG",9,1.89,NA,NA,NA,NA,NA,NA,"stop","S147P Q176* K198L",3
"lib2","SARS-CoV-2","ATAAACAAGACAATAT",2,24.34,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","E141S Q176P",2
"lib2","SARS-CoV-2","ATAAACAATATAGCAG",11,120.47,10.69,-0.14,0.04,2.87,1.1,0,">1 nonsynonymous","T3S A42F",2
"lib2","SARS-CoV-2","ATAAACACAAACTGAT",6,72.25,8.34,-2.49,0.15,1.5,1.05,0.01,">1 nonsynonymous","F44S N107R E135M",3
"lib2","SARS-CoV-2","ATAAACACAGGAAATC",8,56.88,9.34,-1.49,0.11,2.15,1.05,0.01,">1 nonsynonymous","P7S E135V Y143M",3
"lib2","SARS-CoV-2","ATAAACACCGAAAAGG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F D90A K114R K128A",4
"lib2","SARS-CoV-2","ATAAACACTGGCAAAA",8,161.8,10.12,-0.72,0.05,2.77,1.04,0,"1 nonsynonymous","S69Q",1
"lib2","SARS-CoV-2","ATAAACACTTACCAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib2","SARS-CoV-2","ATAAACAGACTTTAAA",29,294.57,9.45,-1.38,0.05,2.4,1.07,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","ATAAACAGATAGAGAT",16,154.79,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5R N24H I80T P82L",4
"lib2","SARS-CoV-2","ATAAACAGATATTAGA",7,36.53,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A42W I88R N107C",3
"lib2","SARS-CoV-2","ATAAACATAAATATCT",9,136.66,8.75,-2.09,0.05,2.91,1.12,0,">1 nonsynonymous","N24T S113V T201Y",3
"lib2","SARS-CoV-2","ATAAACATAACTAGAT",1,26.8,9.84,-0.99,0.11,2.2,1,0.01,">1 nonsynonymous","L57C D97S K128D",3
"lib2","SARS-CoV-2","ATAAACATAGACAAAT",3,58.09,10.26,-0.58,0.05,3,1.04,0,">1 nonsynonymous","S69T K87N",2
"lib2","SARS-CoV-2","ATAAACATAGTAATAA",2,193.15,8.14,-2.69,0.11,2.31,1.07,0,">1 nonsynonymous","G9L V115I T140R G166F",4
"lib2","SARS-CoV-2","ATAAACATGGATGCCG",3,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F C102D P149Y",3
"lib2","SARS-CoV-2","ATAAACATGTCACTAA",1,4.28,NA,NA,NA,NA,NA,NA,"stop","K26L L60R I104P S113K S129R Y175*",6
"lib2","SARS-CoV-2","ATAAACATTAATCCAC",6,7.32,NA,NA,NA,NA,NA,NA,"stop","F17L E135K E154Y Q168* V180A",5
"lib2","SARS-CoV-2","ATAAACATTACCGAAT",12,7.92,NA,NA,NA,NA,NA,NA,"stop","N40F C158*",2
"lib2","SARS-CoV-2","ATAAACCAATTAAAAA",4,179.5,9.51,-1.32,0.12,2.28,1.05,0.01,"1 nonsynonymous","Y178E",1
"lib2","SARS-CoV-2","ATAAACCACCACTGGA",3,22.6,10.55,-0.29,0.05,2.98,1,0,">1 nonsynonymous","L5Q S36C",2
"lib2","SARS-CoV-2","ATAAACCACTAATCCG",7,1.34,NA,NA,NA,NA,NA,NA,"stop","A33* L131V",2
"lib2","SARS-CoV-2","ATAAACCATAAGCTGA",1,21.96,9.21,-1.62,0.06,2.97,1.02,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","ATAAACCATTAGGAGG",1,32.8,10.43,-0.41,0.12,2.8,1.2,0.01,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","ATAAACCCCTATTTTC",8,126.81,10.79,-0.05,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAACCCGCCTCCAA",11,77.33,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F12D N157S",2
"lib2","SARS-CoV-2","ATAAACCGAACAAAAA",3,69.92,10.86,0.02,0.05,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAACCGCCAACGAG",2,67.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18L A33S C61R A105I Q176P",5
"lib2","SARS-CoV-2","ATAAACCGGCTTATGT",19,305.88,10.8,-0.03,0.04,2.9,1.11,0,"1 nonsynonymous","V115P",1
"lib2","SARS-CoV-2","ATAAACCGTCGCCTAA",10,75.21,6.32,-4.52,0.82,1.5,1.31,0.03,">1 nonsynonymous","K56R Y93S D98Y N107G E141V",5
"lib2","SARS-CoV-2","ATAAACCTACCACGAG",2,44.1,10.96,0.13,0.08,2.91,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAACCTGGCTAGAA",11,165.86,10.33,-0.5,0.04,2.9,1.07,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","ATAAACCTTACAAACA",3,22.77,10.83,-0.01,0.09,2.8,1.15,0,"1 nonsynonymous","R27T",1
"lib2","SARS-CoV-2","ATAAACCTTCACCTTA",15,6.58,NA,NA,NA,NA,NA,NA,"stop","D137* G152Q",2
"lib2","SARS-CoV-2","ATAAACCTTCTCACTT",15,198.88,10.27,-0.57,0.03,2.73,1.05,0,"1 nonsynonymous","Y35H",1
"lib2","SARS-CoV-2","ATAAACGAAACGTTAT",1,9.14,10.87,0.03,0.12,2.79,1.22,0.01,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","ATAAACGAACCCAACG",5,1.08,NA,NA,NA,NA,NA,NA,"stop","N92R T148* N157F",3
"lib2","SARS-CoV-2","ATAAACGAATATTGGT",9,43.3,10.29,-0.55,0.1,2.58,1,0.01,">1 nonsynonymous","A42Y K132W G155K",3
"lib2","SARS-CoV-2","ATAAACGCAAGCCTAA",10,210.82,10.86,0.02,0.05,2.89,1.09,0,">1 nonsynonymous","R16T T201R",2
"lib2","SARS-CoV-2","ATAAACGCACTCAAAT",1,439.31,8.28,-2.55,0.12,2.05,1.05,0,"1 nonsynonymous","Y165C",1
"lib2","SARS-CoV-2","ATAAACGCACTTACTT",1,8.13,6,-4.84,2,3,1.01,0,">1 nonsynonymous","G86V F167H",2
"lib2","SARS-CoV-2","ATAAACGCCGCCCGAA",4,78.37,8.12,-2.72,0.11,1.94,1.05,0.01,">1 nonsynonymous","L5A Y119R Y165Q L187Q",4
"lib2","SARS-CoV-2","ATAAACGCGACCAAAT",10,149.41,10.12,-0.72,0.05,2.68,1.01,0,">1 nonsynonymous","A81V N151S K198P",3
"lib2","SARS-CoV-2","ATAAACGCTATTCCTA",6,24.92,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y50P P54Q R73S Y91P",4
"lib2","SARS-CoV-2","ATAAACGGAGTAGAGT",6,25.16,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T85M D90G F99L A105P V181M",5
"lib2","SARS-CoV-2","ATAAACGGATTGGGAA",10,3.35,NA,NA,NA,NA,NA,NA,"stop","Y35V G51A T100M F160* N171L T201Y",6
"lib2","SARS-CoV-2","ATAAACGTACACAGAT",8,130.53,10.89,0.05,0.06,2.93,1.08,0,"1 nonsynonymous","K26R",1
"lib2","SARS-CoV-2","ATAAACGTCACTTTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","T15D A22* L125F",3
"lib2","SARS-CoV-2","ATAAACGTTAATCGCT",3,94.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45V Y93W P133H S139L",4
"lib2","SARS-CoV-2","ATAAACGTTGATTGGG",6,77.85,8.91,-1.92,0.22,1.5,1,0.03,">1 nonsynonymous","K56W I72M",2
"lib2","SARS-CoV-2","ATAAACTAAGGAGAAG",4,87.11,6.29,-4.54,0.61,1.5,1.13,0.02,">1 nonsynonymous","A81C V115N N130D Q144T G152S F167R",6
"lib2","SARS-CoV-2","ATAAACTAAGGCTACG",10,116.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59V I142F Y165R",3
"lib2","SARS-CoV-2","ATAAACTACACGACGC",7,59.82,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S45A F70G",2
"lib2","SARS-CoV-2","ATAAACTACCGGGTAT",5,51.27,6,-4.84,1.94,3,1.18,0.01,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","ATAAACTACGTACGCC",2,293.51,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","D34W Q84D P177L K199E",4
"lib2","SARS-CoV-2","ATAAACTAGAGTACTT",2,11.3,10.75,-0.09,0.05,2.98,1.07,0,"1 nonsynonymous","P149W",1
"lib2","SARS-CoV-2","ATAAACTAGGCAAGCA",5,32.5,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6I W23K F44T K56L G86S T148V F167L T201A",8
"lib2","SARS-CoV-2","ATAAACTCAACTTTAA",2,47.42,6,-4.84,2,1.5,1.1,0.02,"1 nonsynonymous","N92M",1
"lib2","SARS-CoV-2","ATAAACTCACCCTAAC",2,21.93,10.73,-0.11,0.06,2.97,1.06,0,">1 nonsynonymous","C61L L188R",2
"lib2","SARS-CoV-2","ATAAACTCGACAACGA",7,148.8,9.66,-1.18,0.05,2.51,1.02,0,">1 nonsynonymous","A14C F44L V77L",3
"lib2","SARS-CoV-2","ATAAACTCGGCATATG",2,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E V115I",2
"lib2","SARS-CoV-2","ATAAACTGAAGGTATT",1,36.91,6.18,-4.65,0.97,1.5,1.12,0.04,">1 nonsynonymous","Y21L R127H E141V",3
"lib2","SARS-CoV-2","ATAAACTGACTTGCTA",11,35.72,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","T55W V103T Y123D F156N",4
"lib2","SARS-CoV-2","ATAAACTGCTACGATG",6,257.15,9.23,-1.6,0.08,2.82,1.06,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","ATAAACTGGACTAAGA",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G Y35K K48L P96M S184A K198Q",6
"lib2","SARS-CoV-2","ATAAACTGTGCGAACG",3,68.44,10.35,-0.49,0.07,2.88,1.08,0,"1 nonsynonymous","L125G",1
"lib2","SARS-CoV-2","ATAAACTGTTCCTCAC",5,23.1,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N40E P82I L183A",3
"lib2","SARS-CoV-2","ATAAACTGTTCGATCG",2,53.25,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T63L Q176K V181R",3
"lib2","SARS-CoV-2","ATAAACTTAAAGATAG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","C31* Y91V R136E",3
"lib2","SARS-CoV-2","ATAAACTTACAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6Y E10R D112V L122*",4
"lib2","SARS-CoV-2","ATAAACTTACTACGCG",2,40.7,6.24,-4.59,0.53,1.5,1.12,0.01,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","ATAAACTTATGTGTAA",4,34.74,6.3,-4.54,0.61,1.5,1.15,0.01,">1 nonsynonymous","V37L F44N P82T",3
"lib2","SARS-CoV-2","ATAAACTTCAAAGACG",4,53.93,8.31,-2.53,0.13,2.57,1.08,0.01,">1 nonsynonymous","L5A R16S A22C C31G K56D K114R F156N",7
"lib2","SARS-CoV-2","ATAAACTTCACTGAGT",9,244.7,10.84,0.01,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAACTTTACATAGT",3,49.37,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K26A D34Q P82L F99S P169D",5
"lib2","SARS-CoV-2","ATAAACTTTTGTATTA",2,27.38,9.98,-0.86,0.14,2.48,1.06,0.01,">1 nonsynonymous","I88L S129A",2
"lib2","SARS-CoV-2","ATAAAGAAAAGTCCTA",2,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F K87Y V103Q",3
"lib2","SARS-CoV-2","ATAAAGAAACTCGTTT",5,35.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y21K D68L S147G",3
"lib2","SARS-CoV-2","ATAAAGAAAGTGGACT",4,14.12,10.22,-0.61,0.09,2.81,1.01,0,">1 nonsynonymous","N13F L187F",2
"lib2","SARS-CoV-2","ATAAAGAAATAAACAT",6,33.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C102W S113F P149T P197S",4
"lib2","SARS-CoV-2","ATAAAGAAATACAATG",11,158.52,10.21,-0.63,0.04,2.83,1.04,0,"1 nonsynonymous","Y121K",1
"lib2","SARS-CoV-2","ATAAAGAAATCGTGGG",2,26.94,8.52,-2.32,0.31,1.5,1.16,0.04,">1 nonsynonymous","A14Y A81K",2
"lib2","SARS-CoV-2","ATAAAGAACAATATAT",3,10.72,10.61,-0.23,0.08,2.91,1,0,">1 nonsynonymous","S41L C61V",2
"lib2","SARS-CoV-2","ATAAAGAACCAGACCC",8,101.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A18L R25C V32A D90I",4
"lib2","SARS-CoV-2","ATAAAGAACCTTAACT",8,82.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D97H N107L Y143R T148L",4
"lib2","SARS-CoV-2","ATAAAGAACGCTCTAC",16,68.51,6,-4.84,2,3,1.24,0,">1 nonsynonymous","I28K A42F W106S",3
"lib2","SARS-CoV-2","ATAAAGAAGGAAAGAG",3,77.79,10.09,-0.75,0.04,2.96,1.02,0,">1 nonsynonymous","K87I I104T A190I K199I",4
"lib2","SARS-CoV-2","ATAAAGAAGTAAACTA",1,10.31,6.09,-4.75,1.98,1.5,1.12,0.01,">1 nonsynonymous","S19F V52Y",2
"lib2","SARS-CoV-2","ATAAAGAAGTGAATTA",5,21.99,6,-4.84,1.93,1.5,1.13,0.01,">1 nonsynonymous","W106M Y143R F156V",3
"lib2","SARS-CoV-2","ATAAAGAATAAATCTA",6,41.39,8.77,-2.07,0.1,2.93,1.11,0,">1 nonsynonymous","G9V D59E N120P",3
"lib2","SARS-CoV-2","ATAAAGAATATAGGTT",3,52.6,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86K P96R",2
"lib2","SARS-CoV-2","ATAAAGAATATGACCT",15,299.83,10.31,-0.52,0.03,2.98,1.05,0,">1 nonsynonymous","V37K C61H K87G N110T L122S",5
"lib2","SARS-CoV-2","ATAAAGAATCGCGATG",9,0.9,NA,NA,NA,NA,NA,NA,"stop","P133* E141S",2
"lib2","SARS-CoV-2","ATAAAGAATCTGGTGC",1,14.4,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","Y35P I72S",2
"lib2","SARS-CoV-2","ATAAAGAATGTGACAA",8,10.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C31Y C49R Q84L C158S",4
"lib2","SARS-CoV-2","ATAAAGACAATTAATA",17,213.46,10.43,-0.41,0.05,2.89,1.08,0,">1 nonsynonymous","L5F P54A N120C",3
"lib2","SARS-CoV-2","ATAAAGACATGTACTA",1,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V P96L Y121V K198T",4
"lib2","SARS-CoV-2","ATAAAGACGCGGCGGC",4,0.23,NA,NA,NA,NA,NA,NA,"stop","T55Y G83* N107D F167*",4
"lib2","SARS-CoV-2","ATAAAGACTCAGTATA",2,29.08,7.61,-3.23,0.35,1.5,1.16,0.05,">1 nonsynonymous","N40W Q176R",2
"lib2","SARS-CoV-2","ATAAAGAGAAAGGTAT",1,55.05,10.03,-0.8,0.08,2.42,1.05,0,">1 nonsynonymous","F62S I104A",2
"lib2","SARS-CoV-2","ATAAAGAGAAATCTTG",4,26.84,6.02,-4.81,1.15,1.5,1.2,0.04,">1 nonsynonymous","R27N S41V G83Q S147V P161N",5
"lib2","SARS-CoV-2","ATAAAGAGAACAATAC",9,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28D F44L G83I K94L Y121P",5
"lib2","SARS-CoV-2","ATAAAGAGCAAAGCCG",4,78.44,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","G9W N120T Q176R",3
"lib2","SARS-CoV-2","ATAAAGATAATCGTTA",3,5.58,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V37P C102G N107F Y121H K128Q G146R",6
"lib2","SARS-CoV-2","ATAAAGATAGGAGTAA",4,91.5,8.03,-2.81,0.18,1.91,1.12,0.01,">1 nonsynonymous","C61F Q176C",2
"lib2","SARS-CoV-2","ATAAAGATATCAACTG",3,30.65,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","R25S T63S Y91R E135K P169F",5
"lib2","SARS-CoV-2","ATAAAGATGATAAACC",17,373.44,10.16,-0.68,0.04,2.74,1.04,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","ATAAAGATGTAATCGT",3,45.66,10.68,-0.15,0.04,2.96,1,0,"1 nonsynonymous","Y66H",1
"lib2","SARS-CoV-2","ATAAAGATTGTTCTAC",6,42.6,6.05,-4.79,1.07,1.5,1.24,0.02,"1 nonsynonymous","R124T",1
"lib2","SARS-CoV-2","ATAAAGCAAATAAAAC",2,52.42,6.4,-4.44,0.44,1.5,1.22,0.01,">1 nonsynonymous","K48R I88T G146H V153D",4
"lib2","SARS-CoV-2","ATAAAGCAAATATAAT",4,7.1,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","A89R F99N",2
"lib2","SARS-CoV-2","ATAAAGCAAGAAATAA",6,84.89,10.85,0.01,0.04,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAAGCAAGACAAGG",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K V173F",2
"lib2","SARS-CoV-2","ATAAAGCACAAACCCA",21,5.68,NA,NA,NA,NA,NA,NA,"stop","N40Y S147* L162D P197R",4
"lib2","SARS-CoV-2","ATAAAGCACTTAACAC",4,92.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25T N40V T100N G116E L187Q",5
"lib2","SARS-CoV-2","ATAAAGCAGATTTGAC",19,98.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N D68E D97P Q144S",4
"lib2","SARS-CoV-2","ATAAAGCATGACAACT",4,92.75,9.29,-1.54,0.08,2.51,1.06,0,">1 nonsynonymous","C49V C61E K87I D98E P197T",5
"lib2","SARS-CoV-2","ATAAAGCCAATCGTGC",2,7.89,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","C49D K56Y",2
"lib2","SARS-CoV-2","ATAAAGCCACATTGGC",9,221.43,10.84,0.01,0.02,2.93,1.08,0,">1 nonsynonymous","K56A T201L",2
"lib2","SARS-CoV-2","ATAAAGCCACTATCAT",3,23.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2S A42G L95T G116W R136E Q168L",6
"lib2","SARS-CoV-2","ATAAAGCCCACCCTTT",3,35.57,10.6,-0.23,0.08,2.88,1.07,0,">1 nonsynonymous","A18K V37T P149K",3
"lib2","SARS-CoV-2","ATAAAGCCGCCTAGCA",10,225.15,9.75,-1.09,0.03,2.89,1.1,0,">1 nonsynonymous","N118S K128R",2
"lib2","SARS-CoV-2","ATAAAGCCTCAAAGAT",4,6.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15I R25I Y121V",3
"lib2","SARS-CoV-2","ATAAAGCCTTCTCATT",5,114.31,10.82,-0.02,0.05,2.95,1.06,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","ATAAAGCGAAGTAAAC",2,25.38,10.59,-0.25,0.1,2.96,1.02,0,">1 nonsynonymous","G116H S129K L187E",3
"lib2","SARS-CoV-2","ATAAAGCGTGTTTTCT",5,7.43,6.87,-3.97,2,3,1.08,0.01,">1 nonsynonymous","N13G V77L F134C Y165P A192Q S200L",6
"lib2","SARS-CoV-2","ATAAAGCTGCAGTGTG",3,40.28,10.62,-0.22,0.06,2.98,1,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","ATAAAGGAATATGACT",3,26.75,10.77,-0.07,0.03,2.99,1.04,0,"1 nonsynonymous","R16A",1
"lib2","SARS-CoV-2","ATAAAGGACAGCCCAA",6,34.93,9.53,-1.31,0.17,1.6,1.13,0.01,">1 nonsynonymous","W23V S43R F160M",3
"lib2","SARS-CoV-2","ATAAAGGACTCCCAGA",1,66.38,10.92,0.09,0.05,2.97,1.05,0,">1 nonsynonymous","L122Q T201I",2
"lib2","SARS-CoV-2","ATAAAGGAGAGTACAC",1,6.26,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","F12C W106N",2
"lib2","SARS-CoV-2","ATAAAGGATAAGATCT",3,87.18,7.25,-3.59,0.16,1.5,1.13,0.01,">1 nonsynonymous","Y35A T55G V173W Q176K",4
"lib2","SARS-CoV-2","ATAAAGGATCCGTTGT",5,102.16,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S19V N171A G196W",3
"lib2","SARS-CoV-2","ATAAAGGATTTAATGA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","N4I R16N Y35*",3
"lib2","SARS-CoV-2","ATAAAGGCCCTAGCCA",9,0.4,NA,NA,NA,NA,NA,NA,"stop","L122E S129P C158*",3
"lib2","SARS-CoV-2","ATAAAGGCCTCACGGT",5,51.45,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F62R G86Y P161W",3
"lib2","SARS-CoV-2","ATAAAGGCTTTGTAAG",5,104.51,10.61,-0.23,0.04,2.95,1.05,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","ATAAAGGGTACATAAA",7,2.94,NA,NA,NA,NA,NA,NA,"stop","L5* A42V E141T P149S",4
"lib2","SARS-CoV-2","ATAAAGGTACTGACGA",12,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176V",1
"lib2","SARS-CoV-2","ATAAAGGTAGGGGTAA",6,0.69,NA,NA,NA,NA,NA,NA,"stop","N40T K48T N107K G174* A190G",5
"lib2","SARS-CoV-2","ATAAAGGTGCCATACG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","G9C S19E T46N L60* N118L",5
"lib2","SARS-CoV-2","ATAAAGGTGCCTAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101N T148Y",2
"lib2","SARS-CoV-2","ATAAAGTAAAGGAAAG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","R16V N64G A81N S129C K199*",5
"lib2","SARS-CoV-2","ATAAAGTAACCAAATC",2,16.26,6.04,-4.8,2,1.5,1.12,0.04,">1 nonsynonymous","L5G A81E K94E K132G",4
"lib2","SARS-CoV-2","ATAAAGTAACCATCGA",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99E N118R P149L",3
"lib2","SARS-CoV-2","ATAAAGTAATAACTAA",5,49.47,10.91,0.07,0.07,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAAGTAATGATTCA",6,56.29,6.47,-4.36,0.57,1.5,1.19,0.03,">1 nonsynonymous","S19E R27L Y121H I138N",4
"lib2","SARS-CoV-2","ATAAAGTAATTTAATA",3,55.55,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F44I W106I P149N G172K",4
"lib2","SARS-CoV-2","ATAAAGTATAAAGGAG",12,72.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48C K87S W106P Y123N",4
"lib2","SARS-CoV-2","ATAAAGTATCCTTAGA",3,16.35,7.3,-3.54,0.43,1.5,1.05,0.07,">1 nonsynonymous","T63G I88R T201F",3
"lib2","SARS-CoV-2","ATAAAGTATTATTTAG",3,49.23,10.45,-0.39,0.05,2.85,1.14,0,">1 nonsynonymous","C61M D90R",2
"lib2","SARS-CoV-2","ATAAAGTCACCTTACT",9,143.14,8.74,-2.09,0.07,2.97,1.07,0,">1 nonsynonymous","Y119S N130D N171L",3
"lib2","SARS-CoV-2","ATAAAGTCCATGCCTA",4,161.02,10.19,-0.64,0.03,2.95,1.03,0,"1 nonsynonymous","G155W",1
"lib2","SARS-CoV-2","ATAAAGTCTACTGTGA",8,47,6,-4.84,1.96,3,1.14,0,">1 nonsynonymous","D98V C102Y S129K E141Y",4
"lib2","SARS-CoV-2","ATAAAGTCTTGATGCA",8,0.92,NA,NA,NA,NA,NA,NA,"stop","T46P R73* D98N W106R",4
"lib2","SARS-CoV-2","ATAAAGTGGTCCTTAA",9,285.25,8.46,-2.37,0.1,2.96,1.08,0,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","ATAAAGTGGTTATACA",4,16.03,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","G83Y P96L Y123D K132M",4
"lib2","SARS-CoV-2","ATAAAGTTCGAATTCG",3,25.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25N D90T",2
"lib2","SARS-CoV-2","ATAAAGTTCTACCACC",7,21.34,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","K48W K56G C102T S129T",4
"lib2","SARS-CoV-2","ATAAAGTTCTCTAATA",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18F Y39W",2
"lib2","SARS-CoV-2","ATAAAGTTGGGACCAC",3,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F V20A",2
"lib2","SARS-CoV-2","ATAAAGTTTTACCGAA",4,45.69,9.96,-0.88,0.04,2.83,1.17,0,">1 nonsynonymous","C61W G174K",2
"lib2","SARS-CoV-2","ATAAATAAAAACCCAT",1,10.38,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T55S K87A P96A A145E G174F T201Y",6
"lib2","SARS-CoV-2","ATAAATAAAACTATCA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M D98L T140R G155R",4
"lib2","SARS-CoV-2","ATAAATAAAATTCTAT",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72H P96Q Y121K F156G",4
"lib2","SARS-CoV-2","ATAAATAAACACTTTT",7,170.39,9.68,-1.15,0.05,2.88,1.07,0,">1 nonsynonymous","N109T T201D",2
"lib2","SARS-CoV-2","ATAAATAAACTAAACA",7,14.21,6,-4.84,2,1.5,1.35,0.08,">1 nonsynonymous","N1G K87M V103S",3
"lib2","SARS-CoV-2","ATAAATAAACTTAAAG",6,35.36,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N13C C61V C150G",3
"lib2","SARS-CoV-2","ATAAATAAGATGGGCT",10,77.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19A D68T G101M G117V C150L P197S",6
"lib2","SARS-CoV-2","ATAAATAAGTCGACTA",12,134.63,10.64,-0.19,0.04,2.89,1.08,0,"1 nonsynonymous","F134N",1
"lib2","SARS-CoV-2","ATAAATAATAAATCGT",1,13.08,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G9T C49S G86K E154D",4
"lib2","SARS-CoV-2","ATAAATAATCTAACGT",1,31.06,10.75,-0.08,0.06,2.89,1.13,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","ATAAATACACGCAAAC",2,17.25,10.76,-0.07,0.05,2.99,1.03,0,">1 nonsynonymous","T3I G146S",2
"lib2","SARS-CoV-2","ATAAATACACTTCAAA",10,181.45,8.77,-2.07,0.07,1.62,1.1,0,">1 nonsynonymous","R136M G155I",2
"lib2","SARS-CoV-2","ATAAATACATAACCCA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","A14P T85* I142M S184L",4
"lib2","SARS-CoV-2","ATAAATACATTCTAAA",7,69.28,9.49,-1.35,0.09,2.77,1.11,0,">1 nonsynonymous","N4T N120T",2
"lib2","SARS-CoV-2","ATAAATACCCATATGT",2,38.08,9.17,-1.67,0.1,1.77,1.05,0.01,">1 nonsynonymous","N13S C61H G86C",3
"lib2","SARS-CoV-2","ATAAATACGTCTTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120Y N130V",2
"lib2","SARS-CoV-2","ATAAATACGTTAAAAG",5,70.09,10.85,0.01,0.09,2.86,1.12,0,">1 nonsynonymous","N1K L5D",2
"lib2","SARS-CoV-2","ATAAATACTGTACACG",20,59.04,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5D A42T P82K Y93V G117P Y123L V182E",7
"lib2","SARS-CoV-2","ATAAATACTTTTAGAT",3,0.87,NA,NA,NA,NA,NA,NA,"stop","Y35S G86* N107R N171D",4
"lib2","SARS-CoV-2","ATAAATAGACCCGGCA",1,90.91,9.59,-1.25,0.05,2.93,1.03,0,">1 nonsynonymous","T3S N110R Y143V",3
"lib2","SARS-CoV-2","ATAAATAGACTAATGG",10,585.82,7.34,-3.49,0.18,1.5,1.13,0.01,">1 nonsynonymous","K48R T100L Q144S R179T",4
"lib2","SARS-CoV-2","ATAAATAGATTCCAGT",1,19.82,8.13,-2.71,0.29,1.78,1.16,0.04,">1 nonsynonymous","S41V S69K F134W",3
"lib2","SARS-CoV-2","ATAAATAGCAATAGAA",9,218.18,6.35,-4.49,0.41,1.5,1.2,0.01,">1 nonsynonymous","Y123M C158T",2
"lib2","SARS-CoV-2","ATAAATAGCGCTATCC",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S P96H A105Y G116H",4
"lib2","SARS-CoV-2","ATAAATATAACCAAAT",2,11.49,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D59M F99Q",2
"lib2","SARS-CoV-2","ATAAATATAAGTCATA",1,42.17,9.3,-1.54,0.08,2.7,1.1,0,">1 nonsynonymous","L60Y T85K T100N T170R",4
"lib2","SARS-CoV-2","ATAAATATATAACGAG",1,28.61,10.26,-0.58,0.08,2.62,1.16,0,">1 nonsynonymous","P133Y V153M",2
"lib2","SARS-CoV-2","ATAAATATCTGGTACC",7,173.26,10.89,0.06,0.05,2.97,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAATATGACACATT",11,130.36,10.61,-0.23,0.02,2.99,1.01,0,">1 nonsynonymous","S129E I142Y",2
"lib2","SARS-CoV-2","ATAAATATGACTGAGA",4,235.08,9.2,-1.64,0.05,1.8,1.07,0,">1 nonsynonymous","P7L A22E S36W D90M",4
"lib2","SARS-CoV-2","ATAAATATGATAGCGG",13,6.18,NA,NA,NA,NA,NA,NA,"stop","I28L N58* W106R K114M",4
"lib2","SARS-CoV-2","ATAAATATTAAGAGCC",13,734.91,9.31,-1.52,0.05,2.68,1.07,0,">1 nonsynonymous","V37E Q176L",2
"lib2","SARS-CoV-2","ATAAATATTATACCTA",5,32.2,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","E10L S41W Y91P W106L",4
"lib2","SARS-CoV-2","ATAAATATTGGATCAT",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S N24S D34P D90N D112Q L183V",6
"lib2","SARS-CoV-2","ATAAATCAAATAAGTG",6,36.33,10.84,0.01,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAATCAATACGGCG",8,93.17,10.7,-0.13,0.02,2.94,1.08,0,">1 nonsynonymous","V37L L125F",2
"lib2","SARS-CoV-2","ATAAATCACATCTATT",2,42.31,10.72,-0.12,0.07,2.97,1.04,0,"1 nonsynonymous","T148E",1
"lib2","SARS-CoV-2","ATAAATCATACTCACG",1,32.79,10.9,0.07,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAATCATGTACTAG",7,25.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S43M C61P K114R F126P K132M N151H",6
"lib2","SARS-CoV-2","ATAAATCCAACATCTA",2,24.36,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","F12G Y143S Q176S L187D",4
"lib2","SARS-CoV-2","ATAAATCCAATAATAT",14,143.39,8.6,-2.23,0.06,2.57,1.08,0,">1 nonsynonymous","R78N G146M N151M",3
"lib2","SARS-CoV-2","ATAAATCCATGCAAGT",7,112.39,10.31,-0.53,0.04,2.79,1.05,0,">1 nonsynonymous","T15L R27Q A42Y",3
"lib2","SARS-CoV-2","ATAAATCCATTGAACT",1,8.07,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14Y F99N",2
"lib2","SARS-CoV-2","ATAAATCCCAGTGCTT",14,0.21,NA,NA,NA,NA,NA,NA,"stop","V52G D90L N151D T201*",4
"lib2","SARS-CoV-2","ATAAATCCCGACGTTA",4,20.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2L S19R G83P G116M V182H",5
"lib2","SARS-CoV-2","ATAAATCCTACCACTT",1,18.01,8.57,-2.26,0.23,1.5,1.11,0.03,">1 nonsynonymous","R25A T148M",2
"lib2","SARS-CoV-2","ATAAATCCTGGTAAAC",17,218.89,10.81,-0.03,0.05,2.93,1.08,0,">1 nonsynonymous","T55D C61V",2
"lib2","SARS-CoV-2","ATAAATCGACATAACT",9,90.8,10.83,-0.01,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAATCGCAATTAGA",3,62.28,10.78,-0.06,0.05,2.93,1.06,0,"1 nonsynonymous","L111D",1
"lib2","SARS-CoV-2","ATAAATCGCCGTACAA",1,15.61,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A14V K87F V115S I142G P149C",5
"lib2","SARS-CoV-2","ATAAATCTAAAAAACG",7,74.9,8.94,-1.9,0.17,1.5,1.01,0.01,">1 nonsynonymous","V37A G86R",2
"lib2","SARS-CoV-2","ATAAATCTAAAATAAT",4,64.94,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V65C D97E R124H G174E L187Q",5
"lib2","SARS-CoV-2","ATAAATCTATAGGATG",9,55.63,10.02,-0.82,0.1,2.54,1.06,0,">1 nonsynonymous","Y66K N130F",2
"lib2","SARS-CoV-2","ATAAATCTGGGGCAAT",4,26.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S V77E A81M A145T T201I",5
"lib2","SARS-CoV-2","ATAAATCTGTCTTCCC",5,9.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C61T I104Y G117S L162T",4
"lib2","SARS-CoV-2","ATAAATCTTACACCAG",10,2.53,NA,NA,NA,NA,NA,NA,"stop","F44I N107* R136F",3
"lib2","SARS-CoV-2","ATAAATCTTATGACTT",7,52.28,10.69,-0.15,0.06,2.96,1.01,0,">1 nonsynonymous","I2E G9P",2
"lib2","SARS-CoV-2","ATAAATCTTTGAAAAT",4,33.41,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","W106V K114A D137Q",3
"lib2","SARS-CoV-2","ATAAATGAAAGAGTGA",1,57.24,10.77,-0.06,0.04,2.88,1.11,0,">1 nonsynonymous","T63A G83S V173K",3
"lib2","SARS-CoV-2","ATAAATGAAATGGCCA",5,61.56,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6I C61Y Y119L G174Y L183I",5
"lib2","SARS-CoV-2","ATAAATGAAGATCTAA",8,53.69,6,-4.84,1.6,1.5,1.13,0.01,">1 nonsynonymous","S53N I72T S113H L131R S164Y T170L",6
"lib2","SARS-CoV-2","ATAAATGAAGCTCGAA",3,13.81,10.82,-0.02,0.09,3,1,0,"1 nonsynonymous","E154N",1
"lib2","SARS-CoV-2","ATAAATGACAAAGAAT",5,13.9,6.12,-4.72,0.8,1.66,1.17,0.02,">1 nonsynonymous","S19I S45F C102R",3
"lib2","SARS-CoV-2","ATAAATGACTCATAAC",21,174.64,10.74,-0.09,0.04,2.96,1.06,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","ATAAATGAGTCACGAT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","V32* V65* T140M S164N",4
"lib2","SARS-CoV-2","ATAAATGATAATACTC",3,7.81,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","D98W F134L P161L",3
"lib2","SARS-CoV-2","ATAAATGATCCCTTCT",2,27.93,8.49,-2.35,0.17,1.71,1.02,0.01,">1 nonsynonymous","A33S T85E N120E P149L G155Y",5
"lib2","SARS-CoV-2","ATAAATGCAGATATTG",9,108.61,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","K56L N107Y G117T",3
"lib2","SARS-CoV-2","ATAAATGCATATGACT",4,44,10.85,0.01,0.06,2.96,1.06,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","ATAAATGCCAACGTAA",9,91.17,8.56,-2.28,0.32,1.5,1,0.04,"1 nonsynonymous","R25F",1
"lib2","SARS-CoV-2","ATAAATGCTAAAGCGA",12,85.48,7.9,-2.93,0.15,1.57,1.13,0.01,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","ATAAATGGATACTATT",2,3.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183S",1
"lib2","SARS-CoV-2","ATAAATGGTAGACAGC",1,1.1,NA,NA,NA,NA,NA,NA,"stop","N92Y Y143*",2
"lib2","SARS-CoV-2","ATAAATGGTGACGACT",21,347.43,10.67,-0.17,0.03,2.9,1.1,0,">1 nonsynonymous","Q144T L188N",2
"lib2","SARS-CoV-2","ATAAATGGTGTTGTGT",2,14.29,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","E10S R73S P96I V115P F185S",5
"lib2","SARS-CoV-2","ATAAATGGTTCCGATT",5,89.71,9.09,-1.75,0.08,2.86,1.11,0,">1 nonsynonymous","G83S G117A",2
"lib2","SARS-CoV-2","ATAAATGTAGAGTCGA",6,1.6,NA,NA,NA,NA,NA,NA,"stop","L5G V32* F156H",3
"lib2","SARS-CoV-2","ATAAATGTATGCCTAG",3,10.24,9.4,-1.43,0.28,1.79,1.23,0.03,">1 nonsynonymous","F12T S41Y",2
"lib2","SARS-CoV-2","ATAAATGTCCATCAGA",1,5.68,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","N92Q P169A A190E",3
"lib2","SARS-CoV-2","ATAAATTAAAAAACAG",1,9.88,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I28R Q84D L95P S139T P197L",5
"lib2","SARS-CoV-2","ATAAATTAAAGCCAAA",8,94.58,10.85,0.01,0.05,2.92,1.06,0,"1 nonsynonymous","D59N",1
"lib2","SARS-CoV-2","ATAAATTACACCAACA",1,46.62,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23S L38T F44S Y91R L122R N151T F156E",7
"lib2","SARS-CoV-2","ATAAATTACCTCCCTG",4,36.94,9.41,-1.43,0.11,2.27,1.13,0.01,">1 nonsynonymous","C6V R27K S45L A190T",4
"lib2","SARS-CoV-2","ATAAATTACTCCAGCT",4,55.89,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D112E N151Y F160M F167N G172F",5
"lib2","SARS-CoV-2","ATAAATTAGAACAAGC",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E F160N",2
"lib2","SARS-CoV-2","ATAAATTAGGATTATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C C49Q",2
"lib2","SARS-CoV-2","ATAAATTATTCCCCAC",6,44.58,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89L P161N",2
"lib2","SARS-CoV-2","ATAAATTCAAAAGTCC",2,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G C49F C61K P96W K128S C158R",6
"lib2","SARS-CoV-2","ATAAATTCAACACAAG",1,34.7,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C31L I104K C150R T201Y",4
"lib2","SARS-CoV-2","ATAAATTCAATAATTC",4,45.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P E135K F160T",3
"lib2","SARS-CoV-2","ATAAATTCATAATTTT",1,7.56,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R27V A89R G146Y T201L",4
"lib2","SARS-CoV-2","ATAAATTCCATAGGAA",2,15.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R27G N64R V77S N171S",4
"lib2","SARS-CoV-2","ATAAATTCGGTAGCCG",5,26.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6D S19R C49P N64R L131A",5
"lib2","SARS-CoV-2","ATAAATTCGTAGATGC",4,95.56,6,-4.84,1.72,1.5,1.15,0,">1 nonsynonymous","E135L T170W Y178L",3
"lib2","SARS-CoV-2","ATAAATTCTAAGAAAG",21,54.88,6,-4.84,2,1.5,1.38,0.03,">1 nonsynonymous","Y50S V103S",2
"lib2","SARS-CoV-2","ATAAATTCTACTTCCA",3,0.68,NA,NA,NA,NA,NA,NA,"stop","Y39* I72T T100W Q163F Y175E",5
"lib2","SARS-CoV-2","ATAAATTGAGCATCTT",7,45.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F70L K94P N110I S129L",4
"lib2","SARS-CoV-2","ATAAATTGAGGCGGTT",6,43.99,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K94Y R127H S139I",3
"lib2","SARS-CoV-2","ATAAATTGGATAAATA",5,33.71,9.07,-1.77,0.14,1.5,1,0.01,">1 nonsynonymous","F12D E141M",2
"lib2","SARS-CoV-2","ATAAATTGTCCCGTTG",17,2.38,NA,NA,NA,NA,NA,NA,"stop","N4S C49R K199*",3
"lib2","SARS-CoV-2","ATAAATTGTTAACTGC",8,25.12,6,-4.84,2,1.5,1.21,0.07,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","ATAAATTTAAGTAATA",7,18.4,8.03,-2.81,0.18,1.5,1.05,0.02,">1 nonsynonymous","A22M Y165R",2
"lib2","SARS-CoV-2","ATAAATTTACTTCGCA",2,20.81,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R127V Q176K",2
"lib2","SARS-CoV-2","ATAAATTTATATATAT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F160V N171*",2
"lib2","SARS-CoV-2","ATAAATTTATCATTTT",1,88.53,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89N E154D Y175P",3
"lib2","SARS-CoV-2","ATAAATTTCATACCTA",5,0.75,NA,NA,NA,NA,NA,NA,"stop","P54T N107Y G146T E154S Q176*",5
"lib2","SARS-CoV-2","ATAAATTTGAATTTGT",2,19.33,10.26,-0.57,0.09,2.86,1.14,0,"1 nonsynonymous","A145I",1
"lib2","SARS-CoV-2","ATAAATTTTAAACACT",4,65.88,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N1M F167T",2
"lib2","SARS-CoV-2","ATAAATTTTACAGAAT",3,18.49,10.4,-0.44,0.14,2.62,1.26,0.01,"1 nonsynonymous","V181I",1
"lib2","SARS-CoV-2","ATAAATTTTCCTATTA",1,21.54,10.71,-0.12,0.09,2.7,1.34,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAATTTTTGATGAC",4,9.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5V V71D V103L N120M L131N I138G",6
"lib2","SARS-CoV-2","ATAACAAAACTTCAGT",1,14.04,10.77,-0.07,0.08,2.87,1.11,0,">1 nonsynonymous","V52L D90L Q163V",3
"lib2","SARS-CoV-2","ATAACAAAATGCTACA",7,46.28,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","K94H V103D G174E",3
"lib2","SARS-CoV-2","ATAACAAAATTAGCCG",9,0.15,NA,NA,NA,NA,NA,NA,"stop","L60F A67N S129I Q176*",4
"lib2","SARS-CoV-2","ATAACAAACAGACCAT",8,37.62,9.71,-1.12,0.07,2.07,1.03,0,">1 nonsynonymous","L38Q P54K E141R",3
"lib2","SARS-CoV-2","ATAACAAACCAAACAC",10,63.97,6.43,-4.4,0.51,1.5,1.12,0.03,">1 nonsynonymous","P96D W106S Y123W",3
"lib2","SARS-CoV-2","ATAACAAACGAATAGG",4,79.83,10.86,0.03,0.06,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAACAAACTAAACCA",4,7.2,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","G86Y P96T P149V",3
"lib2","SARS-CoV-2","ATAACAAACTATCATT",3,21.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68A K94Q S164K",3
"lib2","SARS-CoV-2","ATAACAAACTGGCTAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R A145D E186F",3
"lib2","SARS-CoV-2","ATAACAAAGAAGAGCC",7,87.41,10.8,-0.03,0.04,2.93,1.08,0,">1 nonsynonymous","L5I S200L",2
"lib2","SARS-CoV-2","ATAACAAAGGATGATA",2,1.8,NA,NA,NA,NA,NA,NA,"stop","S36* S200*",2
"lib2","SARS-CoV-2","ATAACAAAGGGTACAT",3,15.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K E141L",2
"lib2","SARS-CoV-2","ATAACAAATAAGTAAG",1,0.79,NA,NA,NA,NA,NA,NA,"stop","T46* C61K P96R K114H D137N",5
"lib2","SARS-CoV-2","ATAACAAATAATGCTA",11,105.14,10.35,-0.49,0.04,2.92,1.1,0,">1 nonsynonymous","V37F K114A G155N",3
"lib2","SARS-CoV-2","ATAACAAATACTTCAC",3,2.86,NA,NA,NA,NA,NA,NA,"stop","V37* L122M",2
"lib2","SARS-CoV-2","ATAACAAATAGATATC",15,162.2,9.3,-1.54,0.08,1.9,1.07,0,">1 nonsynonymous","N24A C61T K128C P149T Q163L",5
"lib2","SARS-CoV-2","ATAACAAATAGTGTAT",4,30.7,10.73,-0.11,0.06,2.88,1.13,0,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","ATAACAAATGAGATCT",7,45.1,8.93,-1.91,0.19,1.53,1.2,0.01,">1 nonsynonymous","L57R D90C",2
"lib2","SARS-CoV-2","ATAACAAATTGCACTT",5,8.5,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","L95Q Y119H T170L",3
"lib2","SARS-CoV-2","ATAACAACAATAACAT",4,1.07,NA,NA,NA,NA,NA,NA,"stop","N1Q S43* P54T N151T",4
"lib2","SARS-CoV-2","ATAACAACCGGGGCAG",2,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Q W106Q Y119L I142P S200L",5
"lib2","SARS-CoV-2","ATAACAACCTCCCAAG",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G R27G Y175H L188V",4
"lib2","SARS-CoV-2","ATAACAACGATACATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","ATAACAACGATTTGTG",2,52.8,6.2,-4.64,0.53,1.67,1.16,0.01,">1 nonsynonymous","L5N R124S",2
"lib2","SARS-CoV-2","ATAACAACGCCACTAC",3,25.38,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","C6F T46K I72Y",3
"lib2","SARS-CoV-2","ATAACAACGGTTGATA",3,10.51,9.63,-1.21,0.14,2.83,1.05,0.01,">1 nonsynonymous","A18Q N58W Q84S",3
"lib2","SARS-CoV-2","ATAACAACGGTTTGCA",2,13.72,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14N N64F V71I D112F",4
"lib2","SARS-CoV-2","ATAACAACTACGTTAA",5,49.36,10.89,0.06,0.07,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACAACTGGGTAGC",3,56.13,10.91,0.08,0.07,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACAACTGTACTGC",1,11.07,7.85,-2.99,0.42,1.5,1.17,0.06,"1 nonsynonymous","D112F",1
"lib2","SARS-CoV-2","ATAACAACTTAAATTA",10,214.51,10.78,-0.06,0.04,3,1.02,0,">1 nonsynonymous","T140A K198W",2
"lib2","SARS-CoV-2","ATAACAACTTTCAAAG",7,53.26,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L60G R124H C158F",3
"lib2","SARS-CoV-2","ATAACAAGATCTATGA",3,24.46,10.77,-0.07,0.1,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACAAGCACAACAT",5,78.58,9.57,-1.27,0.1,2.23,1.07,0,">1 nonsynonymous","C102L L122W G174N",3
"lib2","SARS-CoV-2","ATAACAAGCACTCACG",5,34.37,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F17L S53I R179A",3
"lib2","SARS-CoV-2","ATAACAAGCTCACAAA",17,204.57,10.66,-0.17,0.03,2.91,1.08,0,"1 nonsynonymous","E135D",1
"lib2","SARS-CoV-2","ATAACAAGGGGTGATG",1,20.46,8.23,-2.61,0.09,1.63,1.06,0.01,">1 nonsynonymous","I2Q S41R K56A L122R T148N F156L L183T",7
"lib2","SARS-CoV-2","ATAACAAGTTAGAGTC",4,38.7,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","V32Q F99L S113D",3
"lib2","SARS-CoV-2","ATAACAATATAATTAC",10,75.15,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4T S108G Y119S P133G P149H",5
"lib2","SARS-CoV-2","ATAACAATATATAACA",12,1.57,NA,NA,NA,NA,NA,NA,"stop","L5E T100* I104C F160W T201I",5
"lib2","SARS-CoV-2","ATAACAATCATCTCAC",2,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N A89S G166K",3
"lib2","SARS-CoV-2","ATAACAATCCAATTAC",2,16.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83R F134K G146M",3
"lib2","SARS-CoV-2","ATAACAATCTGCCAGT",3,65.33,6,-4.84,2,1.65,1.24,0,">1 nonsynonymous","P54S R179N",2
"lib2","SARS-CoV-2","ATAACAATGAAAAAAA",4,39.76,9.76,-1.08,0.1,2.29,1.02,0.01,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","ATAACAATTAAATACA",6,120.49,9.83,-1.01,0.09,2.26,1.04,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","ATAACAATTCCGCCAT",8,3.62,NA,NA,NA,NA,NA,NA,"stop","N1R S19V N24S L57* G101H N130V",6
"lib2","SARS-CoV-2","ATAACAATTGCGAAAA",3,80.35,8.59,-2.24,0.13,3,1.06,0.01,">1 nonsynonymous","Y35M K87Q T170N",3
"lib2","SARS-CoV-2","ATAACAATTTACATCT",4,48,10.64,-0.19,0.05,2.92,1.04,0,"1 nonsynonymous","R127K",1
"lib2","SARS-CoV-2","ATAACACAACATACCT",2,8.63,10.53,-0.3,0.1,3,1.03,0.01,">1 nonsynonymous","T3R T100C A105S",3
"lib2","SARS-CoV-2","ATAACACAACGTGGTA",1,101.21,10.93,0.09,0.08,2.88,1.06,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","ATAACACAAGATCTAG",3,43.28,10.94,0.11,0.06,2.99,1.05,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","ATAACACAATACCATT",3,29.58,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","W23I S45I K128L Q163P",4
"lib2","SARS-CoV-2","ATAACACAATGCGACA",13,190.35,10.8,-0.03,0.03,2.92,1.1,0,"1 nonsynonymous","L188Y",1
"lib2","SARS-CoV-2","ATAACACACACGTCAT",8,117.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38N T63K K94D T140L P149S G196N",6
"lib2","SARS-CoV-2","ATAACACACATAAAAC",1,33.77,8.06,-2.77,0.15,2.04,1.05,0.01,">1 nonsynonymous","Y39K G146L",2
"lib2","SARS-CoV-2","ATAACACACGAACGTA",2,9.86,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","F17R P82R Y93D A105T Y165K",5
"lib2","SARS-CoV-2","ATAACACATGAAACTT",3,166.04,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","ATAACACCAAGCACCC",9,45.05,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","R16M K56M A89L E141F G172V",5
"lib2","SARS-CoV-2","ATAACACCACAACCCT",8,49.1,6.19,-4.65,0.68,1.5,1.16,0.02,">1 nonsynonymous","I72L D97F I142Q G155Y",4
"lib2","SARS-CoV-2","ATAACACGAAAGCGTA",9,16.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I104S C158R N171V",3
"lib2","SARS-CoV-2","ATAACACGAGTATAGA",6,107.37,6.03,-4.81,1.26,1.5,1.27,0.03,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","ATAACACGCACATGAA",1,67.26,9.65,-1.19,0.04,2.89,1.09,0,">1 nonsynonymous","T3P Y119T",2
"lib2","SARS-CoV-2","ATAACACGCATCGAGC",5,70.78,8.14,-2.7,0.15,2.36,1.05,0.01,">1 nonsynonymous","S41L L125T G155P",3
"lib2","SARS-CoV-2","ATAACACGCTGCCAAA",6,95.97,9.5,-1.33,0.09,1.86,1.11,0,">1 nonsynonymous","Y35G F47S",2
"lib2","SARS-CoV-2","ATAACACTCTGAAGAC",3,46.94,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y91W L131C F156S",3
"lib2","SARS-CoV-2","ATAACACTCTGAGAAA",2,14.21,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","E10D Y66V D90I T100P N107T L122K F126I I138E",8
"lib2","SARS-CoV-2","ATAACACTGAATTAAT",4,34.23,10.15,-0.68,0.05,2.81,1.11,0,"1 nonsynonymous","G155V",1
"lib2","SARS-CoV-2","ATAACAGAAATAATAA",3,19.89,9.5,-1.33,0.18,1.86,1.16,0.01,">1 nonsynonymous","D59K V103T",2
"lib2","SARS-CoV-2","ATAACAGAAGATAAAC",6,84.47,10.68,-0.16,0.04,3,1,0,"1 nonsynonymous","A42I",1
"lib2","SARS-CoV-2","ATAACAGAATAAGAAA",4,62.34,10.46,-0.38,0.05,2.89,1.07,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","ATAACAGAATTTGAAA",3,27.62,8.93,-1.9,0.08,1.84,1.12,0,">1 nonsynonymous","C6M D90C",2
"lib2","SARS-CoV-2","ATAACAGACATCTTAA",7,1.55,NA,NA,NA,NA,NA,NA,"stop","F12A W23R L57P N120* K128R",5
"lib2","SARS-CoV-2","ATAACAGACATCTTTA",4,108.47,10.77,-0.07,0.03,2.98,1.04,0,">1 nonsynonymous","T55F N120Q L188V",3
"lib2","SARS-CoV-2","ATAACAGAGAAGACAA",3,3.62,NA,NA,NA,NA,NA,NA,"stop","C6S R27K A105E T140*",4
"lib2","SARS-CoV-2","ATAACAGAGCTACGAA",16,265.3,10.79,-0.05,0.04,2.95,1.06,0,"1 nonsynonymous","F44Y",1
"lib2","SARS-CoV-2","ATAACAGAGTTGTCCG",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T Y35M Y93E G146C",4
"lib2","SARS-CoV-2","ATAACAGATAGGGCAC",2,41.98,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C6L S53V P82L N107A N120Y S147Y",6
"lib2","SARS-CoV-2","ATAACAGATTAACACG",6,21.04,9.9,-0.93,0.1,2.66,1.03,0,">1 nonsynonymous","C61E P96R V115I",3
"lib2","SARS-CoV-2","ATAACAGCTTTATGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32P G86E D97Y",3
"lib2","SARS-CoV-2","ATAACAGGACATGCGC",2,16.31,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C6F F12I N120P C158P",4
"lib2","SARS-CoV-2","ATAACAGGAGTCTAAA",6,5.69,7.52,-3.31,0.48,2.56,1.2,0.05,">1 nonsynonymous","T15I A42D F62K P96Q G174Q",5
"lib2","SARS-CoV-2","ATAACAGGCACGAATG",9,192.68,10.71,-0.13,0.04,2.89,1.12,0,"1 nonsynonymous","N120Y",1
"lib2","SARS-CoV-2","ATAACAGGTGTTTTCC",4,0.58,NA,NA,NA,NA,NA,NA,"stop","F44H Y50*",2
"lib2","SARS-CoV-2","ATAACAGGTTGTAACG",2,10.09,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","L60R A81E W106Q P169L",4
"lib2","SARS-CoV-2","ATAACAGGTTTCACAT",9,24.56,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F99L A105F E141R P161A",4
"lib2","SARS-CoV-2","ATAACAGTAAAAGATA",5,84.39,10.6,-0.24,0.04,2.96,1.04,0,">1 nonsynonymous","A33P V115E",2
"lib2","SARS-CoV-2","ATAACAGTAACCGTTC",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V R16I A105S",3
"lib2","SARS-CoV-2","ATAACAGTCCGTGTGA",15,147.33,8.7,-2.14,0.06,2.96,1.08,0,">1 nonsynonymous","C61K S129I T170C",3
"lib2","SARS-CoV-2","ATAACAGTGCATACAC",12,56.25,9.73,-1.1,0.26,1.62,1.02,0.03,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","ATAACAGTTTCTCTAA",3,10.84,10.13,-0.7,0.15,2.54,1,0.01,">1 nonsynonymous","N40V P149Y",2
"lib2","SARS-CoV-2","ATAACATAAATGGAAT",6,63.99,10.65,-0.18,0.02,2.98,1.02,0,">1 nonsynonymous","N1Y C61Q",2
"lib2","SARS-CoV-2","ATAACATAAATGTAGA",15,175.45,10.39,-0.45,0.03,2.85,1.11,0,">1 nonsynonymous","N4M N40P",2
"lib2","SARS-CoV-2","ATAACATAAGGAAATT",9,47.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P54T G86C D97V N157R",4
"lib2","SARS-CoV-2","ATAACATAATTAGACT",1,23.49,9.92,-0.92,0.07,2.83,1.01,0,">1 nonsynonymous","F44W Y165M",2
"lib2","SARS-CoV-2","ATAACATAATTGCAAA",11,202.62,9.91,-0.93,0.05,2.81,1.13,0,">1 nonsynonymous","G9S L131V G146D",3
"lib2","SARS-CoV-2","ATAACATACACAACTG",1,14.3,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5P W23M P54T R179I",4
"lib2","SARS-CoV-2","ATAACATAGACGCAGA",7,177.85,10.45,-0.38,0.02,2.89,1.06,0,">1 nonsynonymous","E141L N151Y",2
"lib2","SARS-CoV-2","ATAACATAGCTCATGT",12,120.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D112L R127H E141K G155R",4
"lib2","SARS-CoV-2","ATAACATATAACCTTT",14,167.31,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S36F L60S P96T Y121I",4
"lib2","SARS-CoV-2","ATAACATATGACCCAC",8,0.55,NA,NA,NA,NA,NA,NA,"stop","T46A A81T C102S Y119C F134*",5
"lib2","SARS-CoV-2","ATAACATCAAATAAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8D N64F S129Y",3
"lib2","SARS-CoV-2","ATAACATCAAATGTTC",7,101.63,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","ATAACATCACAAACTC",1,46.94,10.39,-0.45,0.04,2.91,1.05,0,">1 nonsynonymous","K94A C195K",2
"lib2","SARS-CoV-2","ATAACATCGCGAGGAC",3,39.17,10.6,-0.23,0.07,2.82,1.17,0,"1 nonsynonymous","D59K",1
"lib2","SARS-CoV-2","ATAACATGAAGTGTCC",6,14.43,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G83N F99T P197H",3
"lib2","SARS-CoV-2","ATAACATGAGTGTCAA",10,116.88,10.87,0.04,0.05,2.89,1.1,0,"1 nonsynonymous","A190S",1
"lib2","SARS-CoV-2","ATAACATTAAAAAGAC",2,5.85,10.04,-0.79,0.38,1.98,1.1,0.06,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","ATAACATTAAATTCAT",7,10,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S A42C Q84S R127K F185S",5
"lib2","SARS-CoV-2","ATAACATTACTAATAT",4,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E P96K G117T",3
"lib2","SARS-CoV-2","ATAACATTATATACCT",1,11.56,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","G9Q V20E N64S H189S",4
"lib2","SARS-CoV-2","ATAACATTGTATGGAG",12,85.43,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L131E G166S V173G V180F",4
"lib2","SARS-CoV-2","ATAACATTTAGACCTA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78H N109K R124H",3
"lib2","SARS-CoV-2","ATAACATTTGTTTACA",12,92.52,9.71,-1.12,0.06,2.05,1.03,0,">1 nonsynonymous","F17P V115R",2
"lib2","SARS-CoV-2","ATAACATTTTATGATG",4,88.7,10.9,0.06,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACCAAAAACTCGC",8,156.7,6.88,-3.96,0.16,1.5,1.12,0,">1 nonsynonymous","Y21D N40G L125S T201W",4
"lib2","SARS-CoV-2","ATAACCAAAAATAAAA",9,54.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21W P149Y G155A V182M",4
"lib2","SARS-CoV-2","ATAACCAAACAAAACA",4,38.96,6.08,-4.76,0.69,1.5,1.11,0.01,">1 nonsynonymous","I28K T85N D112C E135Y V173F",5
"lib2","SARS-CoV-2","ATAACCAACCATCAAT",4,69.96,8.41,-2.43,0.11,2.5,1.07,0,">1 nonsynonymous","F70M Y119E",2
"lib2","SARS-CoV-2","ATAACCAAGTATTCCG",2,23.36,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F62R G86H D112R V181M",4
"lib2","SARS-CoV-2","ATAACCAATAAAACTG",9,159.63,9.91,-0.93,0.06,2.5,1.04,0,">1 nonsynonymous","T3L G9V Y35R",3
"lib2","SARS-CoV-2","ATAACCACCCGCATTC",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T F126N G146L G155R T170S",5
"lib2","SARS-CoV-2","ATAACCACGAGTATGG",9,88.82,6.48,-4.36,0.33,1.5,1.15,0.01,">1 nonsynonymous","N92T V173M",2
"lib2","SARS-CoV-2","ATAACCACTGATAGAT",7,108.87,10.8,-0.04,0.04,2.93,1.08,0,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","ATAACCAGCAATTAAT",17,19.65,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","A42Q K87T I104N R136L G196W S200G",6
"lib2","SARS-CoV-2","ATAACCAGCCTTAAAT",8,5.25,NA,NA,NA,NA,NA,NA,"stop","N64I V115S C195*",3
"lib2","SARS-CoV-2","ATAACCAGTATTAATA",10,80.93,8.53,-2.3,0.21,1.5,1.03,0.02,">1 nonsynonymous","P7S Q84P G146S",3
"lib2","SARS-CoV-2","ATAACCATACGTGGAA",9,26.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A81S W106R N120R L162R",4
"lib2","SARS-CoV-2","ATAACCATAGCAATTT",10,0.87,NA,NA,NA,NA,NA,NA,"stop","F8* L122G",2
"lib2","SARS-CoV-2","ATAACCATATGAACCT",1,28.5,10.24,-0.6,0.08,2.84,1.09,0.01,">1 nonsynonymous","A33R Y39F",2
"lib2","SARS-CoV-2","ATAACCATTGCTGTCT",1,29.57,10.46,-0.37,0.05,2.92,1.07,0,">1 nonsynonymous","P7A I142T",2
"lib2","SARS-CoV-2","ATAACCCAAATGCGGT",2,32.79,10.06,-0.77,0.14,2.1,1.1,0.01,">1 nonsynonymous","T63R I104S",2
"lib2","SARS-CoV-2","ATAACCCAAGCGGGAG",1,20.98,6.38,-4.46,0.96,1.5,1.2,0.05,">1 nonsynonymous","N58S P82Y T148V",3
"lib2","SARS-CoV-2","ATAACCCAGGAACATT",8,107.38,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","E10L Y35V V77R G83P",4
"lib2","SARS-CoV-2","ATAACCCATAATACAA",2,66.68,10.46,-0.38,0.06,2.89,1.07,0,">1 nonsynonymous","N4K Y178A",2
"lib2","SARS-CoV-2","ATAACCCATCCAAGGA",2,60.53,10.77,-0.07,0.06,2.93,1.08,0,"1 nonsynonymous","V153W",1
"lib2","SARS-CoV-2","ATAACCCATGATATAA",2,12.54,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","S45T D59F V71G T85L F134I Y143N",6
"lib2","SARS-CoV-2","ATAACCCCATCCGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5P I142*",2
"lib2","SARS-CoV-2","ATAACCCCCCTGGCTA",2,21.57,10.82,-0.01,0.08,2.91,1.13,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","ATAACCCCTATTTTTT",4,310.39,10.71,-0.13,0.02,2.99,1,0,">1 nonsynonymous","K56T G83L",2
"lib2","SARS-CoV-2","ATAACCCCTCTTCAAA",7,63.19,9.87,-0.96,0.06,2.06,1.09,0,">1 nonsynonymous","T15L S69C",2
"lib2","SARS-CoV-2","ATAACCCTAAGCGTAC",1,9.9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6G F99S Y178L",3
"lib2","SARS-CoV-2","ATAACCCTCAATAATA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S G86N S129I F167L",4
"lib2","SARS-CoV-2","ATAACCCTCTAGTACA",1,40.53,8.44,-2.39,0.1,2.27,1.04,0,">1 nonsynonymous","P82K F156T",2
"lib2","SARS-CoV-2","ATAACCCTGGATGCAA",8,72.12,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23A A42G T55F T63R K94Q D112R",6
"lib2","SARS-CoV-2","ATAACCGAAGAATTCC",6,70.85,8.2,-2.64,0.12,1.8,1.07,0,">1 nonsynonymous","D112E E141W",2
"lib2","SARS-CoV-2","ATAACCGATATCGAGG",16,260.74,9.99,-0.85,0.04,2.82,1.05,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","ATAACCGCGCCGTAAC",1,13.05,NA,NA,NA,NA,NA,NA,"stop","K26E A190*",2
"lib2","SARS-CoV-2","ATAACCGCTTTGTCCC",4,27.65,10.93,0.1,0.08,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACCGGTGAGTGGA",7,3.54,NA,NA,NA,NA,NA,NA,"stop","G9L T15W T85* Y119G Y178K",5
"lib2","SARS-CoV-2","ATAACCGTACTTACCG",11,100.33,10.92,0.08,0.03,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACCGTGATCAAAA",4,15.83,6.61,-4.22,0.54,1.58,1.3,0.03,">1 nonsynonymous","N40V C49S V77L T85G",4
"lib2","SARS-CoV-2","ATAACCGTGCAGCAAA",3,14.38,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R136A I142K C150R L183G",4
"lib2","SARS-CoV-2","ATAACCGTGTGTAGTA",7,2.24,NA,NA,NA,NA,NA,NA,"stop","I2D R27* A105T S139I N157P",5
"lib2","SARS-CoV-2","ATAACCTAACAAAGCG",2,19.61,10.7,-0.13,0.04,3,1,0,">1 nonsynonymous","K48S L131I",2
"lib2","SARS-CoV-2","ATAACCTACATCTTGA",2,36.09,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N107R S113P",2
"lib2","SARS-CoV-2","ATAACCTAGAGGAGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","N107Y N120* Q144V Y178H",4
"lib2","SARS-CoV-2","ATAACCTATACCGCTA",1,7.88,10.71,-0.13,0.26,2.79,1.22,0.01,">1 nonsynonymous","G152S P197D",2
"lib2","SARS-CoV-2","ATAACCTATTGAAGGT",10,218.55,9.87,-0.97,0.09,2.29,1.03,0,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","ATAACCTCGTGGCCAG",5,39.85,8.14,-2.7,0.15,2.22,1.07,0.01,">1 nonsynonymous","G83N S113E",2
"lib2","SARS-CoV-2","ATAACCTTCTGTAAAC",8,4.66,NA,NA,NA,NA,NA,NA,"stop","S113* P133D",2
"lib2","SARS-CoV-2","ATAACCTTCTTCTGAC",4,51.06,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C61R N107I T148P G174W",4
"lib2","SARS-CoV-2","ATAACCTTGTTATAAT",4,151.54,10.22,-0.62,0.02,2.98,1.02,0,">1 nonsynonymous","I28W G155V",2
"lib2","SARS-CoV-2","ATAACCTTTCGTACCT",5,165.64,8.8,-2.03,0.06,2.98,1.04,0,">1 nonsynonymous","L125R E141Y",2
"lib2","SARS-CoV-2","ATAACCTTTTAGTAAT",17,120.33,8.49,-2.34,0.09,1.5,1.11,0,">1 nonsynonymous","A14I K56Q N64D N130H Y165F",5
"lib2","SARS-CoV-2","ATAACGAAATCGTTAA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","N13I R127*",2
"lib2","SARS-CoV-2","ATAACGAACATGATTT",9,4.27,NA,NA,NA,NA,NA,NA,"stop","G9R S19Q S29* K128L Q144L G152I",6
"lib2","SARS-CoV-2","ATAACGAACTGGCGAG",3,0.78,NA,NA,NA,NA,NA,NA,"stop","E10* N24E S41V T63K S113Y",5
"lib2","SARS-CoV-2","ATAACGAAGCCCTAAA",9,21.45,8.75,-2.08,0.24,1.5,1.18,0.04,">1 nonsynonymous","T15P T85Y W106R",3
"lib2","SARS-CoV-2","ATAACGACATCTTCGT",13,5.91,NA,NA,NA,NA,NA,NA,"stop","A18* S45D T85F F167L",4
"lib2","SARS-CoV-2","ATAACGACGCCAGCCG",2,5.09,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P7D V71S Y91V L162M K198N",5
"lib2","SARS-CoV-2","ATAACGAGATTCACCC",4,10.25,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1F L5I K56I S69R R124Q",5
"lib2","SARS-CoV-2","ATAACGAGGGTGGTAA",2,6.08,NA,NA,NA,NA,NA,NA,"stop","G117E T140*",2
"lib2","SARS-CoV-2","ATAACGATAAAGAATC",8,113.42,10.87,0.03,0.06,2.96,1.05,0,"1 nonsynonymous","L60Y",1
"lib2","SARS-CoV-2","ATAACGATATAGAGAC",12,95.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N64K G101I S113N",3
"lib2","SARS-CoV-2","ATAACGATGAGCAAAG",18,159.16,10.93,0.09,0.06,2.92,1.09,0,">1 nonsynonymous","S36E T85S",2
"lib2","SARS-CoV-2","ATAACGATTAAAAATA",3,20.17,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","D59I I72D P149S",3
"lib2","SARS-CoV-2","ATAACGATTTAAATAA",3,44.45,10.77,-0.06,0.06,2.85,1.13,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","ATAACGCAAAGACTAA",2,48.95,9.76,-1.08,0.08,2.22,1.03,0,">1 nonsynonymous","E10W G51K",2
"lib2","SARS-CoV-2","ATAACGCAATAATTGG",8,36.92,6.2,-4.64,0.79,1.5,1.15,0.02,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","ATAACGCAATTGCTAC",7,64.04,10.88,0.04,0.03,2.95,1.07,0,"1 nonsynonymous","Q163K",1
"lib2","SARS-CoV-2","ATAACGCACATAGAGT",8,0.45,NA,NA,NA,NA,NA,NA,"stop","S41Y L122S P149L Y165*",4
"lib2","SARS-CoV-2","ATAACGCACGCCGTAC",10,152.86,9.84,-0.99,0.05,2,1,0,"1 nonsynonymous","F70Y",1
"lib2","SARS-CoV-2","ATAACGCAGAGGAAGG",20,5.17,NA,NA,NA,NA,NA,NA,"stop","N4R Y35M P54*",3
"lib2","SARS-CoV-2","ATAACGCAGTGTTAAA",10,190.02,6,-4.84,1.94,1.5,1.15,0.01,">1 nonsynonymous","V37I S43R C150N G166M",4
"lib2","SARS-CoV-2","ATAACGCATAAGTAAC",5,44.02,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","D68A V77L",2
"lib2","SARS-CoV-2","ATAACGCCCATGATGG",25,247.43,8.75,-2.09,0.08,2.48,1.1,0,">1 nonsynonymous","S41Q S108E",2
"lib2","SARS-CoV-2","ATAACGCCTTTTGTCC",4,72.66,10.2,-0.63,0.04,2.9,1.01,0,">1 nonsynonymous","T85L K114L",2
"lib2","SARS-CoV-2","ATAACGCGCAGAGGAT",6,1.16,NA,NA,NA,NA,NA,NA,"stop","A14* G155L",2
"lib2","SARS-CoV-2","ATAACGCGCTCTGCAA",2,20.53,10.76,-0.08,0.07,2.94,1.07,0,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","ATAACGCTACTAAATG",4,93.23,10.76,-0.08,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACGCTAGACATGA",3,105.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V77Q I104L Q176L T201I",4
"lib2","SARS-CoV-2","ATAACGCTCTCATATT",7,123.67,10.85,0.02,0.06,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACGGAAAAGTCAC",10,132.34,10.87,0.03,0.04,2.97,1.04,0,">1 nonsynonymous","K56A T148R",2
"lib2","SARS-CoV-2","ATAACGGAACCCAAGA",6,0.4,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib2","SARS-CoV-2","ATAACGGACAGGTTCA",1,7.81,10,-0.84,0.29,1.95,1,0.06,"1 nonsynonymous","V182S",1
"lib2","SARS-CoV-2","ATAACGGACCGACATA",2,8.62,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G86F A105V G174I",3
"lib2","SARS-CoV-2","ATAACGGATAACATAA",7,42.3,10.7,-0.14,0.04,3,1.03,0,">1 nonsynonymous","S29K G83R",2
"lib2","SARS-CoV-2","ATAACGGCAGTGAGTA",1,13.08,9.83,-1.01,0.08,2.32,1,0,"1 nonsynonymous","S69G",1
"lib2","SARS-CoV-2","ATAACGGCTAAATTAT",6,21.11,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","S45D N92G R127W T201Y",4
"lib2","SARS-CoV-2","ATAACGGCTATAAAAA",6,52.26,8.05,-2.78,0.16,2.26,1.1,0.01,"1 nonsynonymous","C158Q",1
"lib2","SARS-CoV-2","ATAACGGGAAAACAAC",13,210.25,9.3,-1.53,0.07,1.83,1.12,0,">1 nonsynonymous","C6S P96S N120S",3
"lib2","SARS-CoV-2","ATAACGTAACTGTACC",7,145.86,10.87,0.04,0.05,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAACGTAGGAGGCGC",4,47.05,10.78,-0.05,0.04,2.99,1,0,">1 nonsynonymous","G116R E154R",2
"lib2","SARS-CoV-2","ATAACGTATATATACC",3,31.48,6.09,-4.75,1.26,1.5,1.21,0.02,">1 nonsynonymous","N64L F99H L122M Y159Q",4
"lib2","SARS-CoV-2","ATAACGTCAAGACGCA",4,15.51,10.7,-0.13,0.12,2.86,1.15,0.01,">1 nonsynonymous","S41D P149L",2
"lib2","SARS-CoV-2","ATAACGTTGAGATCCA",3,59.82,8.16,-2.67,0.14,2.25,1.08,0.01,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","ATAACGTTGGCCTGAT",2,57.59,9.02,-1.81,0.07,1.83,1.05,0,">1 nonsynonymous","L60R Q84S D90S N107R",4
"lib2","SARS-CoV-2","ATAACGTTTTAAACTT",3,20.54,8.23,-2.61,0.12,2.81,1.05,0.01,">1 nonsynonymous","T3P L125R Y159H",3
"lib2","SARS-CoV-2","ATAACGTTTTTTGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55L D75* D90H",3
"lib2","SARS-CoV-2","ATAACTAAAAGAATTA",2,66.06,10.78,-0.06,0.06,2.91,1.09,0,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","ATAACTAAACATATTA",1,77.86,10.32,-0.51,0.02,2.93,1.01,0,">1 nonsynonymous","L5R A14M",2
"lib2","SARS-CoV-2","ATAACTAAACTTAAAC",1,35.85,10.57,-0.27,0.06,2.93,1.02,0,">1 nonsynonymous","P133A A190V",2
"lib2","SARS-CoV-2","ATAACTAAAGATAACA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","A33G Y39* D98A T140G",4
"lib2","SARS-CoV-2","ATAACTAAAGGTAAAA",2,11.71,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G86C W106G Y143L N151M N171C",5
"lib2","SARS-CoV-2","ATAACTAAATATGACG",14,120.33,6.02,-4.82,0.38,1.5,1.12,0,">1 nonsynonymous","V11G R16M N24K K87N F99Y L125P Y178L",7
"lib2","SARS-CoV-2","ATAACTAAATGGACGA",5,41.16,6.82,-4.02,0.3,1.58,1.15,0.02,">1 nonsynonymous","V37E A42P C150P Y178F",4
"lib2","SARS-CoV-2","ATAACTACAAAAGCAG",5,69.74,6.95,-3.89,0.32,1.5,1.13,0.02,">1 nonsynonymous","D90V Y119V E141S",3
"lib2","SARS-CoV-2","ATAACTACAAACGTTT",10,96.82,10.63,-0.21,0.05,2.91,1.1,0,">1 nonsynonymous","S45K V65I",2
"lib2","SARS-CoV-2","ATAACTACAGAACTGA",2,77.24,10.08,-0.75,0.06,2.87,1,0,">1 nonsynonymous","K87T W106R K198S",3
"lib2","SARS-CoV-2","ATAACTACATCCTAAC",1,8.26,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A22M D68L D90C F167N A192R",5
"lib2","SARS-CoV-2","ATAACTACCTATAACC",4,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N F44L N64Y C102T",4
"lib2","SARS-CoV-2","ATAACTACTCTATCCA",1,8.37,6,-4.83,0.93,3,1.06,0.02,">1 nonsynonymous","L38S S45H C61G K87D F99L A192T",6
"lib2","SARS-CoV-2","ATAACTAGAGCCTCTT",2,49.64,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T46D L60E Q79H G166D V173M",5
"lib2","SARS-CoV-2","ATAACTAGATGTGCTA",2,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G K87N T100P",3
"lib2","SARS-CoV-2","ATAACTAGCAGGCTTA",6,73.16,9.33,-1.51,0.07,2.86,1.1,0,">1 nonsynonymous","S113T F160S",2
"lib2","SARS-CoV-2","ATAACTAGGAACAACT",5,39.99,6.1,-4.74,0.83,1.5,1.23,0.02,">1 nonsynonymous","F44P Y66S T140M N151L P169H",5
"lib2","SARS-CoV-2","ATAACTAGTGTCTCCA",1,17.91,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G86A T100A I138P G155M",4
"lib2","SARS-CoV-2","ATAACTATAAAGCCCA",3,40.93,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I80R Y143S",2
"lib2","SARS-CoV-2","ATAACTATACTCTACT",14,85.11,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E10K F99S",2
"lib2","SARS-CoV-2","ATAACTATACTCTATT",3,7.49,9.65,-1.19,0.19,2.15,1,0.02,"1 nonsynonymous","R136G",1
"lib2","SARS-CoV-2","ATAACTATGCTGAATA",1,56.46,10.8,-0.04,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACTATTCAAACGA",5,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V C49Y F62Q C102K S129I S164K V180N",7
"lib2","SARS-CoV-2","ATAACTATTCTAGTAT",10,84.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11G R16F G146V",3
"lib2","SARS-CoV-2","ATAACTCAAAAAACAA",12,189.19,10.55,-0.28,0.03,2.9,1.08,0,"1 nonsynonymous","Y66H",1
"lib2","SARS-CoV-2","ATAACTCAACCGCTGC",6,90.55,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35T P96V N107P",3
"lib2","SARS-CoV-2","ATAACTCACCCTCCAC",5,45.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R16H A105K Q144R",3
"lib2","SARS-CoV-2","ATAACTCATTAAGTAA",4,47.28,10.7,-0.14,0.04,2.87,1.13,0,">1 nonsynonymous","D59R G146S",2
"lib2","SARS-CoV-2","ATAACTCCCACATATA",5,175.55,10.31,-0.52,0.04,2.96,1.05,0,"1 nonsynonymous","L125A",1
"lib2","SARS-CoV-2","ATAACTCGAAGGATTA",4,40.12,10.92,0.08,0.05,3,1.02,0,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","ATAACTCGATGACCTA",4,79.36,10.33,-0.5,0.07,2.74,1.11,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","ATAACTCTAAAGGGTA",4,0.17,NA,NA,NA,NA,NA,NA,"stop","T3V C49K N120*",3
"lib2","SARS-CoV-2","ATAACTCTTATAGCAC",5,23.34,10.14,-0.69,0.08,2.88,1.03,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","ATAACTCTTTGCTTAT",3,2.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","ATAACTGAATGTTCCG",1,15.71,10.87,0.03,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACTGACTTGCCCG",10,5.32,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","N13Y D98I V103A",3
"lib2","SARS-CoV-2","ATAACTGCCCGGGACC",5,73.03,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D98W Y159T",2
"lib2","SARS-CoV-2","ATAACTGCTTGAAATA",7,83.93,9.3,-1.53,0.04,2.91,1.05,0,">1 nonsynonymous","T63L N118Y F156P",3
"lib2","SARS-CoV-2","ATAACTGGTAAAGAGT",9,117.28,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V11D N40T S53A C61G R124L",5
"lib2","SARS-CoV-2","ATAACTGTCCCCTCAA",8,69.14,8.02,-2.82,0.25,1.5,1.02,0.02,">1 nonsynonymous","F8M T15L N109D P149T F156H",5
"lib2","SARS-CoV-2","ATAACTGTTATCTCTA",7,44.28,7.18,-3.66,0.4,1.5,1.12,0.04,">1 nonsynonymous","F44Y K56P Y121P",3
"lib2","SARS-CoV-2","ATAACTTAAAAAATTC",7,137.11,10.87,0.03,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAACTTACAGTGATA",6,9.2,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","A14V K48E T148P L162M",4
"lib2","SARS-CoV-2","ATAACTTACATGTTAA",5,102.93,10.6,-0.24,0.11,2.72,1.1,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","ATAACTTACCAGCGGG",6,30.21,6.23,-4.6,1.46,1.5,1.33,0.08,">1 nonsynonymous","F12W G117N V153L F185N",4
"lib2","SARS-CoV-2","ATAACTTACCCGTTAA",4,0.44,NA,NA,NA,NA,NA,NA,"stop","F8V Y39N F99S K128Y T201*",5
"lib2","SARS-CoV-2","ATAACTTACGCTAAAT",7,97.7,10.76,-0.08,0.06,2.93,1.1,0,">1 nonsynonymous","C61S A192E",2
"lib2","SARS-CoV-2","ATAACTTAGGAAAATT",12,12.76,NA,NA,NA,NA,NA,NA,"stop","K87* Y121L H189S",3
"lib2","SARS-CoV-2","ATAACTTAGGGACTAC",5,19.04,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","P54K V103D",2
"lib2","SARS-CoV-2","ATAACTTATTCTCACA",7,36.37,6,-4.84,2,3,1.21,0,">1 nonsynonymous","K87Y Y123P L187S",3
"lib2","SARS-CoV-2","ATAACTTCAATCTCCA",9,57.56,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14N C31G S45P D59C N107W N171A",6
"lib2","SARS-CoV-2","ATAACTTGCACTCTTC",4,78.33,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","E76A N92V N107K Q176L",4
"lib2","SARS-CoV-2","ATAACTTGCGCTAATA",6,24.2,10.76,-0.08,0.1,2.75,1.22,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","ATAACTTGTATTCACA",4,35.16,6,-4.84,1.66,1.5,1.08,0.01,">1 nonsynonymous","F44R D68N W106P N120K",4
"lib2","SARS-CoV-2","ATAACTTTCCCAATTG",7,108.77,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P133I F160C P169F Y175K",4
"lib2","SARS-CoV-2","ATAACTTTTAATGAGT",5,96.87,10.63,-0.2,0.04,2.96,1.02,0,"1 nonsynonymous","K94A",1
"lib2","SARS-CoV-2","ATAACTTTTGATCGAG",4,0,NA,NA,NA,NA,NA,NA,"stop","T55* D98G K128P C158M Y165K",5
"lib2","SARS-CoV-2","ATAAGAAAAGGTACAA",4,167.57,10.11,-0.72,0.04,2.7,1.05,0,">1 nonsynonymous","T3P R27M P96S N120D K198M",5
"lib2","SARS-CoV-2","ATAAGAAAAGTAACTT",9,144.29,10.83,0,0.05,2.93,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAGAAAATTGATAT",7,95.52,9.5,-1.34,0.06,2.11,1.07,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","ATAAGAAACGATCATT",2,35.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R136C P161R",2
"lib2","SARS-CoV-2","ATAAGAAAGGAAGATA",7,59.41,10.72,-0.12,0.06,2.91,1.05,0,">1 nonsynonymous","N1C C61D",2
"lib2","SARS-CoV-2","ATAAGAAAGTCTGTAT",1,11.63,8.53,-2.31,0.38,1.5,1.12,0.07,">1 nonsynonymous","C6F R16F S45L",3
"lib2","SARS-CoV-2","ATAAGAAATCTATCAA",2,16.21,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","N58G I88T T100R D137L G152V",5
"lib2","SARS-CoV-2","ATAAGAACAAAAGAGA",4,19.68,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A22P F99V N157M",3
"lib2","SARS-CoV-2","ATAAGAACAGAGTCTG",4,19.83,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I88N S113L S164N",3
"lib2","SARS-CoV-2","ATAAGAACGACACCTC",2,99.37,10.73,-0.1,0.03,2.95,1.06,0,">1 nonsynonymous","L187K C195N",2
"lib2","SARS-CoV-2","ATAAGAACTAGATTTA",8,0.81,NA,NA,NA,NA,NA,NA,"stop","V65* C150I",2
"lib2","SARS-CoV-2","ATAAGAAGATACCAAG",6,49.83,8.28,-2.56,0.2,1.82,1.15,0.02,">1 nonsynonymous","G9S R27I I28W D98E G117V A190T S200I",7
"lib2","SARS-CoV-2","ATAAGAAGCTATAGCA",9,99.59,10.32,-0.52,0.03,2.92,1.04,0,"1 nonsynonymous","P161A",1
"lib2","SARS-CoV-2","ATAAGAAGTACTTCGC",5,99.64,8.73,-2.11,0.05,2.85,1.07,0,">1 nonsynonymous","N120L N157A",2
"lib2","SARS-CoV-2","ATAAGAAGTATTAGTT",1,35.17,9.97,-0.87,0.1,2.76,1.02,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","ATAAGAATAGTGGACA",4,0.99,NA,NA,NA,NA,NA,NA,"stop","F44S A81L K128I P133S Q144*",5
"lib2","SARS-CoV-2","ATAAGAATCCAAAAGT",5,1.38,NA,NA,NA,NA,NA,NA,"stop","C6N S36V K48* P54H Y119P T201K",6
"lib2","SARS-CoV-2","ATAAGAATCCCGAGAT",5,38.97,6.05,-4.78,1.65,1.5,1.21,0.05,">1 nonsynonymous","A22R D68C P82T F99L G155N",5
"lib2","SARS-CoV-2","ATAAGAATCGTATATC",8,127.76,8.14,-2.69,0.13,2.41,1.07,0.01,"1 nonsynonymous","S113D",1
"lib2","SARS-CoV-2","ATAAGAATGAGCCGTT",6,24.41,8.8,-2.04,0.37,1.5,1.1,0.04,">1 nonsynonymous","A33C Q79K P96S N120K",4
"lib2","SARS-CoV-2","ATAAGAATGCTCACAT",2,86.73,10.05,-0.79,0.06,2.4,1.03,0,">1 nonsynonymous","N13G R27G T100V L122F",4
"lib2","SARS-CoV-2","ATAAGAATTGACGGTA",13,206.68,10.1,-0.74,0.04,2.84,1.07,0,">1 nonsynonymous","A33S G174K",2
"lib2","SARS-CoV-2","ATAAGACAAAAAAGCC",2,1.72,NA,NA,NA,NA,NA,NA,"stop","P54A F62* E76N Y123W S200F",5
"lib2","SARS-CoV-2","ATAAGACAAACTCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135A C150A N171L",3
"lib2","SARS-CoV-2","ATAAGACAACTGATCG",3,57.51,6,-4.84,1.01,1.5,1.17,0.01,">1 nonsynonymous","I28T L131A",2
"lib2","SARS-CoV-2","ATAAGACAAGTTAAGT",14,217.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R78I C158V",2
"lib2","SARS-CoV-2","ATAAGACACAATAAAT",5,166.89,10.64,-0.2,0.02,2.93,1.06,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","ATAAGACATCTCAGGT",4,2.96,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib2","SARS-CoV-2","ATAAGACATTAAATCG",1,0,NA,NA,NA,NA,NA,NA,"stop","R25* Y93R Y178G",3
"lib2","SARS-CoV-2","ATAAGACCGCAGCTGG",4,99.31,6.08,-4.75,0.66,1.5,1.15,0.01,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","ATAAGACGCACAATAT",15,36.44,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Q84T F134E P161N G172W",4
"lib2","SARS-CoV-2","ATAAGACGCCAACCAC",5,45.67,10.56,-0.28,0.09,2.73,1.13,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","ATAAGACGGCCTTAAA",9,505.72,10.17,-0.66,0.05,2.62,1.01,0,">1 nonsynonymous","A89I I104F",2
"lib2","SARS-CoV-2","ATAAGACGTACACACG",24,113.83,9.21,-1.63,0.26,1.5,1,0.03,">1 nonsynonymous","F12L D59Y L60V K94N",4
"lib2","SARS-CoV-2","ATAAGACGTCTAAAAT",4,75.37,9.98,-0.86,0.06,2.9,1.06,0,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","ATAAGACTATCTAGCT",3,2.89,NA,NA,NA,NA,NA,NA,"stop","N107* D112F C150Q P177S C195D",5
"lib2","SARS-CoV-2","ATAAGACTCGCTAGAA",3,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36R F99R",2
"lib2","SARS-CoV-2","ATAAGACTTACTAAAA",9,129.64,11.15,0.31,0.03,2.95,1.06,0,"1 nonsynonymous","Q168Y",1
"lib2","SARS-CoV-2","ATAAGAGAAGGCGAAA",2,12.24,8.84,-1.99,0.19,2.14,1,0.01,">1 nonsynonymous","N64P W106S",2
"lib2","SARS-CoV-2","ATAAGAGAAGTTAATG",7,53.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17A N40V L122S P161S Y178T",5
"lib2","SARS-CoV-2","ATAAGAGACCCTATCC",2,12.67,6,-4.84,2,3,1.07,0,">1 nonsynonymous","E10K A105P L187H",3
"lib2","SARS-CoV-2","ATAAGAGAGTTATGAG",12,75.86,9.79,-1.05,0.12,2.57,1.09,0,">1 nonsynonymous","S129T E141F S164I",3
"lib2","SARS-CoV-2","ATAAGAGCCATGTACA",2,81.18,9.91,-0.93,0.04,2.88,1.12,0,">1 nonsynonymous","N4H E154A G166S",3
"lib2","SARS-CoV-2","ATAAGAGCCTATGGCC",7,81.2,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N64E Q84L D98M C150K",4
"lib2","SARS-CoV-2","ATAAGAGCTAAATGGG",5,105.14,10.2,-0.64,0.07,2.8,1.05,0,">1 nonsynonymous","Y35H A42P",2
"lib2","SARS-CoV-2","ATAAGAGGCAGCAATT",9,205.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2V L162S Q176L",3
"lib2","SARS-CoV-2","ATAAGAGGCGATCATA",12,153.97,7.15,-3.68,0.25,1.5,1.09,0.01,">1 nonsynonymous","D97L G116Q F167L",3
"lib2","SARS-CoV-2","ATAAGAGTCATATATT",2,25.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D F99V",2
"lib2","SARS-CoV-2","ATAAGATAAGGCAAGT",3,109.43,10.91,0.07,0.03,2.97,1.03,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","ATAAGATAAGTATCGA",5,12.19,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5F F99L D137N",3
"lib2","SARS-CoV-2","ATAAGATAATAAGCAT",1,4.59,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGATAGATCTAGT",4,97.29,8.64,-2.2,0.05,2.57,1.06,0,">1 nonsynonymous","Y119K S139A I142T",3
"lib2","SARS-CoV-2","ATAAGATATCAAAGCA",3,40.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28C A145V C150L P169R",4
"lib2","SARS-CoV-2","ATAAGATCAATGAAAG",5,6.73,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S43P F47W S53G G83M Y121I N151T",6
"lib2","SARS-CoV-2","ATAAGATCTACCCATG",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G D137Y F160H G174R P197S",5
"lib2","SARS-CoV-2","ATAAGATGCAAACACG",6,90.05,10.18,-0.66,0.04,2.95,1.04,0,">1 nonsynonymous","Y35A P169T",2
"lib2","SARS-CoV-2","ATAAGATGCAGCCCGG",3,108.14,10.75,-0.09,0.06,2.83,1.1,0,">1 nonsynonymous","P149T T201V",2
"lib2","SARS-CoV-2","ATAAGATGCTGATCAA",1,28.3,10.71,-0.12,0.09,2.92,1.06,0,">1 nonsynonymous","S43E N58R",2
"lib2","SARS-CoV-2","ATAAGATTATACGAGT",1,129.64,10.66,-0.17,0.13,2.84,1.18,0.01,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","ATAAGATTGACTTAGT",1,59.52,9.61,-1.22,0.07,2.66,1.07,0,">1 nonsynonymous","A33R Y66F Y121F",3
"lib2","SARS-CoV-2","ATAAGATTTATAACTA",17,125.81,6,-4.84,2,1.81,1.2,0.01,">1 nonsynonymous","G86E Y119W L188S",3
"lib2","SARS-CoV-2","ATAAGATTTGAAAAAT",1,13.38,10.62,-0.21,0.08,2.84,1.16,0,"1 nonsynonymous","F134W",1
"lib2","SARS-CoV-2","ATAAGATTTGACTATG",7,19.15,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A33P V103K",2
"lib2","SARS-CoV-2","ATAAGCAAAAACTTCG",14,110.01,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C49I P82S Y175R T201G",4
"lib2","SARS-CoV-2","ATAAGCAAAGTTTTTA",2,48.81,10.83,-0.01,0.06,2.96,1.06,0,">1 nonsynonymous","T3L P54I",2
"lib2","SARS-CoV-2","ATAAGCAACGTTTCCG",5,47.89,8.42,-2.41,0.23,1.5,1.08,0.02,">1 nonsynonymous","N4E N58R T63Q R127L",4
"lib2","SARS-CoV-2","ATAAGCAATAAATCTT",6,29.67,6,-4.84,2,1.5,1.27,0.04,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","ATAAGCAATCAACAGC",18,277.74,10.72,-0.11,0.03,2.94,1.07,0,"1 nonsynonymous","G174N",1
"lib2","SARS-CoV-2","ATAAGCAATCCCAACC",1,10.34,10.17,-0.66,0.12,2.43,1.05,0.01,">1 nonsynonymous","T3V D34A",2
"lib2","SARS-CoV-2","ATAAGCACAACATCTA",2,21.85,9.9,-0.94,0.12,2.08,1.06,0,">1 nonsynonymous","N1T P7L S45P",3
"lib2","SARS-CoV-2","ATAAGCACATGCCCTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","F12S Y35* F44W Y50C",4
"lib2","SARS-CoV-2","ATAAGCACTAACTCCA",7,50.06,10.6,-0.24,0.03,2.91,1.09,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","ATAAGCATACCACGAC",1,18.91,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9M S69L K94T N120G E154G",5
"lib2","SARS-CoV-2","ATAAGCATACCTTCAA",4,85.63,9.29,-1.54,0.08,2.6,1.03,0,">1 nonsynonymous","S41H K132V G155S Q168S S184L",5
"lib2","SARS-CoV-2","ATAAGCATCGCCCACG",3,125.46,10.85,0.02,0.04,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCATGATTTAGT",1,31.68,NA,NA,NA,NA,NA,0.09,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCATTACAAACT",3,75.15,10.75,-0.09,0.06,2.81,1.14,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","ATAAGCATTGAAGGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98S S113Q C150Y P161R",4
"lib2","SARS-CoV-2","ATAAGCATTTAATTGT",3,75.55,10.87,0.03,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCATTTAGCTAT",3,84.76,7.3,-3.53,0.2,1.5,1.11,0.01,">1 nonsynonymous","S19M Y39L K48C T170A",4
"lib2","SARS-CoV-2","ATAAGCCAAACTTGTA",3,48.84,10.87,0.04,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCCAATAATAAT",1,33.85,9.82,-1.02,0.14,2.45,1.05,0.01,">1 nonsynonymous","A18Y K48A P149C",3
"lib2","SARS-CoV-2","ATAAGCCAATTCCATA",1,43.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60Q L95Q G155I",3
"lib2","SARS-CoV-2","ATAAGCCACCACTGCA",6,3.01,NA,NA,NA,NA,NA,NA,"stop","S41P K128* Y143C F160N L188A",5
"lib2","SARS-CoV-2","ATAAGCCATACGTAAT",5,38.61,6,-4.84,1.53,1.5,1.22,0.01,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","ATAAGCCCAAAAAGGA",2,18.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L R136T F167M V180G",4
"lib2","SARS-CoV-2","ATAAGCCCCCGTAACG",2,38.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1Y V103I G146I",3
"lib2","SARS-CoV-2","ATAAGCCCGCCATTTA",2,75.08,10.83,-0.01,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCCGTACTGAAA",1,29.43,8.23,-2.61,0.2,1.56,1.12,0.01,">1 nonsynonymous","L5A N130W G146V",3
"lib2","SARS-CoV-2","ATAAGCCTAAAGCGTA",6,75.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7M S36T G101D G117R",4
"lib2","SARS-CoV-2","ATAAGCCTATGCTGGT",7,4.72,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","ATAAGCCTGGAGCCAA",2,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R I104R",2
"lib2","SARS-CoV-2","ATAAGCCTTAGGGTAA",5,24.46,10.82,-0.01,0.08,2.98,1.04,0,"1 nonsynonymous","H189P",1
"lib2","SARS-CoV-2","ATAAGCCTTGCCAGAA",10,1.13,NA,NA,NA,NA,NA,NA,"stop","V11C R25V I80Q G86W I142F Q176*",6
"lib2","SARS-CoV-2","ATAAGCGCATATTCAA",10,48.29,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","W23K A67P V115Y F156S S200L",5
"lib2","SARS-CoV-2","ATAAGCGCCCACCAAT",5,98.57,10.24,-0.6,0.05,2.89,1.08,0,">1 nonsynonymous","S41L A81E",2
"lib2","SARS-CoV-2","ATAAGCGCCTGCTAAA",8,34.67,6.33,-4.51,0.81,1.5,1.21,0.03,">1 nonsynonymous","A33V C49K C150P",3
"lib2","SARS-CoV-2","ATAAGCGGGACACCAT",6,146.71,9.88,-0.96,0.05,2.55,1.02,0,">1 nonsynonymous","S69Q Q168S",2
"lib2","SARS-CoV-2","ATAAGCGGTATTCATG",1,33.41,9.6,-1.23,0.06,2.92,1.06,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","ATAAGCGTGACCAATA",1,35.62,10.8,-0.03,0.07,2.91,1.09,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","ATAAGCTAATTTTAAG",9,66.17,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V11H N64Q V71L Y119D V182S",5
"lib2","SARS-CoV-2","ATAAGCTCGGACATAA",3,116.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86V Y119M G146R Y175S",4
"lib2","SARS-CoV-2","ATAAGCTCTAACCGAA",1,11.85,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","A42S T63S D98L N107F Y119K",5
"lib2","SARS-CoV-2","ATAAGCTCTTTATGAG",1,82.7,10.76,-0.07,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAGCTGATATCAGG",5,25.66,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F8D L95G P149D",3
"lib2","SARS-CoV-2","ATAAGCTGATTACTAG",3,40.04,11.01,0.17,0.08,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGCTGCTAAATTT",1,27.9,8.68,-2.16,0.27,1.5,1,0.03,"1 nonsynonymous","A89W",1
"lib2","SARS-CoV-2","ATAAGCTTAAGCAATA",9,197.25,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F44S A81S N171K",3
"lib2","SARS-CoV-2","ATAAGCTTAAGTAAGC",1,0.51,NA,NA,NA,NA,NA,NA,"stop","A33* T85V",2
"lib2","SARS-CoV-2","ATAAGCTTTCTATGGG",9,111.67,8.29,-2.55,0.1,1.97,1.14,0,">1 nonsynonymous","G9Y E141L G146Y",3
"lib2","SARS-CoV-2","ATAAGGAAAAATTTTA",1,6.39,10.89,0.06,0.16,2.88,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGGAATATTGTAT",2,25.98,7.84,-2.99,0.18,1.5,1.01,0.01,">1 nonsynonymous","N64D K87E Y123V E154L",4
"lib2","SARS-CoV-2","ATAAGGACATATCACT",6,18.13,9.24,-1.6,0.2,1.84,1.09,0.02,">1 nonsynonymous","T15F R27G T201L",3
"lib2","SARS-CoV-2","ATAAGGACCGTGCGGG",8,49.03,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2G C61L V103F",3
"lib2","SARS-CoV-2","ATAAGGACTAGAGACC",7,99.94,10.83,-0.01,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGGAGAACCGTAG",8,146.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S129P I142D Y178S P197K",4
"lib2","SARS-CoV-2","ATAAGGAGAGACAATA",6,14.12,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C49H K56S T85M N107M",4
"lib2","SARS-CoV-2","ATAAGGAGAGAGATTG",10,87.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81K D90Y W106Y",3
"lib2","SARS-CoV-2","ATAAGGAGTGATGATA",4,50.73,8.72,-2.12,0.09,2.03,1.06,0,">1 nonsynonymous","N107T P149R",2
"lib2","SARS-CoV-2","ATAAGGATACCGAATT",3,41.36,9.41,-1.43,0.12,2.04,1.12,0.01,">1 nonsynonymous","G86S K198P T201Y",3
"lib2","SARS-CoV-2","ATAAGGATAGCAACGC",3,13.83,10.88,0.04,0.06,2.98,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGGATAGCCTATA",2,0.74,NA,NA,NA,NA,NA,NA,"stop","N1* G86W",2
"lib2","SARS-CoV-2","ATAAGGATTTAACACG",12,260.21,10.3,-0.54,0.03,2.83,1.06,0,">1 nonsynonymous","A33T V115T I138C N151G",4
"lib2","SARS-CoV-2","ATAAGGCACAAACCAA",8,24.34,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C49K C61T C102W W106L F167L",5
"lib2","SARS-CoV-2","ATAAGGCACAAAGCCG",7,62.01,10.75,-0.09,0.04,3,1,0,"1 nonsynonymous","K132T",1
"lib2","SARS-CoV-2","ATAAGGCATCATAATT",11,92.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D112N K128G Y143L T201E",4
"lib2","SARS-CoV-2","ATAAGGCCAAATTGTA",8,77.49,10.47,-0.36,0.04,2.93,1,0,">1 nonsynonymous","D90Y T140E",2
"lib2","SARS-CoV-2","ATAAGGCCACTTGTAT",2,25.75,10.58,-0.25,0.15,2.81,1.11,0.02,">1 nonsynonymous","D59N K87T P149E",3
"lib2","SARS-CoV-2","ATAAGGCCTACATTAA",6,134.17,10.64,-0.19,0.03,2.89,1.05,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","ATAAGGCCTTTGTAGA",5,36.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44V D68E L95G K128V A145L",5
"lib2","SARS-CoV-2","ATAAGGCGGCTCACAA",6,137.16,8.37,-2.47,0.14,2.57,1.06,0.01,">1 nonsynonymous","F126T P149V F160C",3
"lib2","SARS-CoV-2","ATAAGGCTAAGGATTT",4,0.13,NA,NA,NA,NA,NA,NA,"stop","K56R V153M T201*",3
"lib2","SARS-CoV-2","ATAAGGCTCGGCAACT",6,117.94,9.96,-0.88,0.07,2.02,1.05,0,">1 nonsynonymous","N1R G83L W106Y K128L P197L",5
"lib2","SARS-CoV-2","ATAAGGGCACCATTTG",3,17.87,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V20Q H189N",2
"lib2","SARS-CoV-2","ATAAGGGCCCACACTT",7,94.94,8.52,-2.31,0.09,3,1.12,0,"1 nonsynonymous","Y159I",1
"lib2","SARS-CoV-2","ATAAGGGCCCTCCCTG",2,16.92,10.6,-0.24,0.07,2.89,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGGGTCATTCACT",1,25.34,10.79,-0.05,0.08,2.93,1.08,0,">1 nonsynonymous","C61M V65L",2
"lib2","SARS-CoV-2","ATAAGGTACCATTACT",9,96.78,10.81,-0.02,0.06,2.91,1.08,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","ATAAGGTACGATAGCC",5,60.77,9.21,-1.63,0.11,1.95,1.04,0.01,">1 nonsynonymous","A42I K48W K114N N120M K198L",5
"lib2","SARS-CoV-2","ATAAGGTAGACTTAAG",5,69.39,10.17,-0.66,0.03,2.93,1.06,0,">1 nonsynonymous","N64D G174L",2
"lib2","SARS-CoV-2","ATAAGGTCAGCCCAGC",11,267.58,10.66,-0.18,0.03,2.9,1.08,0,">1 nonsynonymous","A42E G83S",2
"lib2","SARS-CoV-2","ATAAGGTCGAATCTAC",3,55.98,10.87,0.04,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGGTCTCATACCT",1,18.37,10.19,-0.65,0.13,2.74,1,0.01,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","ATAAGGTCTCATTTTT",10,182.27,10.05,-0.78,0.04,2.94,1.05,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","ATAAGGTGAAACGGAT",7,82.76,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G117R P149A Y178K E186H",4
"lib2","SARS-CoV-2","ATAAGGTGAAACTGTA",1,9.87,10.83,-0.01,0.12,3,1,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","ATAAGGTGAAGAAATA",2,6.03,9.61,-1.22,0.47,1.79,1.22,0.08,">1 nonsynonymous","V37W L131S S200V",3
"lib2","SARS-CoV-2","ATAAGGTGCGACTCGT",9,41.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I138D R179L",2
"lib2","SARS-CoV-2","ATAAGGTTTAATAAAT",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S43N D112R K128N",4
"lib2","SARS-CoV-2","ATAAGGTTTAATATAA",5,20.95,8.73,-2.1,0.09,2.79,1.04,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","ATAAGTAAAAGCATAA",1,20.88,7.46,-3.38,0.34,1.5,1,0.04,">1 nonsynonymous","Y39L R124S",2
"lib2","SARS-CoV-2","ATAAGTAAACTAACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y P96T Y175N",3
"lib2","SARS-CoV-2","ATAAGTAAAGCCAGCC",3,139.76,10.57,-0.27,0.03,2.89,1.06,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","ATAAGTAAGCTTACAG",4,25.8,10.87,0.04,0.08,2.96,1.04,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","ATAAGTAAGGTTATGA",2,18.46,6,-4.84,1.33,3,1.04,0.01,">1 nonsynonymous","F12A T85D R136I E154Y L162R T170V",6
"lib2","SARS-CoV-2","ATAAGTAATCCAAGCG",10,128.49,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V11S L122V T170E Y178D",4
"lib2","SARS-CoV-2","ATAAGTACATATTCAG",1,22.63,10.85,0.02,0.06,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGTACCTCACAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15S C49* G86L",3
"lib2","SARS-CoV-2","ATAAGTACGTAATACC",3,59.86,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T3A N40V Y143W Y178L",4
"lib2","SARS-CoV-2","ATAAGTAGACAATTAC",4,86.62,10.82,-0.01,0.06,2.92,1.09,0,"1 nonsynonymous","K114M",1
"lib2","SARS-CoV-2","ATAAGTAGCAAGTACC",1,0.85,NA,NA,NA,NA,NA,NA,"stop","Q84* P149S S200H",3
"lib2","SARS-CoV-2","ATAAGTAGCATAGACA",1,21.09,9.22,-1.62,0.12,2.11,1.15,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","ATAAGTAGCTGACTTA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","T3S D97V V115R I142* P149Q N171P",6
"lib2","SARS-CoV-2","ATAAGTAGTCTGGAAA",5,41.46,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","K56M S69K G155F",3
"lib2","SARS-CoV-2","ATAAGTATACAGAGAC",3,25.58,10.17,-0.66,0.05,2.96,1.03,0,">1 nonsynonymous","C31F N130V",2
"lib2","SARS-CoV-2","ATAAGTATAGAATTTG",3,11.88,8.95,-1.89,0.18,1.64,1.08,0.02,">1 nonsynonymous","E10R W106K P197G T201R",4
"lib2","SARS-CoV-2","ATAAGTATATGTTGAC",6,1,NA,NA,NA,NA,NA,NA,"stop","Q163N G174*",2
"lib2","SARS-CoV-2","ATAAGTATATTACTAA",8,94.46,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","P177E",1
"lib2","SARS-CoV-2","ATAAGTATCACGAGAA",8,39.47,10.17,-0.66,0.08,2.78,1.08,0,"1 nonsynonymous","T15F",1
"lib2","SARS-CoV-2","ATAAGTATGTTTCCAA",10,188.9,10.07,-0.77,0.02,2.92,1.06,0,">1 nonsynonymous","G83L N120K T140M F156Y",4
"lib2","SARS-CoV-2","ATAAGTATTATACTAA",3,32.52,6,-4.84,2,3,1.17,0,"1 nonsynonymous","V20D",1
"lib2","SARS-CoV-2","ATAAGTATTCAACTAG",11,47.96,8.36,-2.48,0.3,1.5,1,0.04,">1 nonsynonymous","D90Q R127M T148Y",3
"lib2","SARS-CoV-2","ATAAGTATTCACTATT",1,44.91,10.86,0.02,0.06,2.95,1.06,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","ATAAGTCAAATTATCA",10,108.88,8.88,-1.96,0.03,2.91,1.11,0,">1 nonsynonymous","P54I Y119L F160E",3
"lib2","SARS-CoV-2","ATAAGTCAATGTAAGC",5,99.68,10.87,0.03,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAAGTCAGCACCTTT",4,107.28,10.11,-0.73,0.07,2.32,1.05,0,">1 nonsynonymous","F99L K198W",2
"lib2","SARS-CoV-2","ATAAGTCCCATATAAC",2,32.94,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y21W C31W F70E",3
"lib2","SARS-CoV-2","ATAAGTCCCCCCTAGA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","I2Y P7L V37* S45T L60H V77T",6
"lib2","SARS-CoV-2","ATAAGTCCCCTTCAAA",9,94.25,8.89,-1.94,0.08,1.64,1.12,0,">1 nonsynonymous","F8Y V77T P149L V173F",4
"lib2","SARS-CoV-2","ATAAGTCCTAGTCTTA",4,1.88,NA,NA,NA,NA,NA,NA,"stop","G9R K56T D112*",3
"lib2","SARS-CoV-2","ATAAGTCGATATAAAG",1,19.26,7.73,-3.11,0.11,2,1.11,0,">1 nonsynonymous","S29A S53I C61A Y175D",4
"lib2","SARS-CoV-2","ATAAGTCGTACAGCTG",3,58.54,8.73,-2.1,0.09,2.61,1.15,0,">1 nonsynonymous","I2V G9T P96S Y119S",4
"lib2","SARS-CoV-2","ATAAGTCTAATCGAAC",3,25.34,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S45D T55L V77M W106M Y119V Y143Q",6
"lib2","SARS-CoV-2","ATAAGTCTCCAAACGC",2,31.9,10.9,0.06,0.08,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAAGTCTCCGAGCGT",6,51.52,10.84,0.01,0.05,2.86,1.14,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","ATAAGTCTGTCAAACG",14,76.18,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","P82V D98C S129P",3
"lib2","SARS-CoV-2","ATAAGTCTTGACAAGT",10,56.56,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D90I D97M C102M Y119S C150S",5
"lib2","SARS-CoV-2","ATAAGTGAAAAACTTG",7,1.51,NA,NA,NA,NA,NA,NA,"stop","E135V Y143R Q144* T148*",4
"lib2","SARS-CoV-2","ATAAGTGAAGAATGAT",4,31.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99T N107V C150S",3
"lib2","SARS-CoV-2","ATAAGTGAAGATGGAG",9,134.69,7.87,-2.97,0.12,1.68,1.14,0,">1 nonsynonymous","K48S D59R Y119V K128C",4
"lib2","SARS-CoV-2","ATAAGTGATTGCTACG",7,31.81,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L5P K48S I104R",3
"lib2","SARS-CoV-2","ATAAGTGCCTCTTGAA",2,11.01,10.62,-0.21,0.05,3,1.04,0,">1 nonsynonymous","Y66N N171I",2
"lib2","SARS-CoV-2","ATAAGTTAAAAAATAA",6,12.02,6.1,-4.73,0.4,2.02,1.12,0,">1 nonsynonymous","S41R S69N W106R",3
"lib2","SARS-CoV-2","ATAAGTTAAAAATTTG",4,21.17,9.72,-1.12,0.15,2.04,1.13,0.01,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","ATAAGTTACCTAACCA",7,52.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D34V I88S N107H",3
"lib2","SARS-CoV-2","ATAAGTTACTACCTTC",9,1.32,NA,NA,NA,NA,NA,NA,"stop","F8* P96Y V153Y F167R",4
"lib2","SARS-CoV-2","ATAAGTTAGCTTATAT",5,57.67,10.44,-0.4,0.05,2.9,1.01,0,">1 nonsynonymous","N4L N151W",2
"lib2","SARS-CoV-2","ATAAGTTATACCCCAT",9,64.59,8.69,-2.15,0.12,1.81,1.09,0.01,">1 nonsynonymous","C6G C102M T201C",3
"lib2","SARS-CoV-2","ATAAGTTATCTGTAAT",3,58.39,10.67,-0.17,0.07,2.9,1.04,0,">1 nonsynonymous","N120V F160S",2
"lib2","SARS-CoV-2","ATAAGTTCGCGCTCAT",2,15.76,8.27,-2.56,0.14,2.04,1.01,0.01,">1 nonsynonymous","S108T N157C",2
"lib2","SARS-CoV-2","ATAAGTTGCACGAGTA",13,214.15,10.68,-0.16,0.02,2.93,1.05,0,">1 nonsynonymous","R16T T46A",2
"lib2","SARS-CoV-2","ATAAGTTTAAAGCGAG",8,33.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19I L57G V71M A81N T148Q",5
"lib2","SARS-CoV-2","ATAAGTTTGGAAAAAG",7,57.97,9.66,-1.18,0.09,2.04,1.05,0,">1 nonsynonymous","C61V Y91K A105T",3
"lib2","SARS-CoV-2","ATAAGTTTGTAAGTAC",3,6.76,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","P54L I80E Y93Q G152H N157Y",5
"lib2","SARS-CoV-2","ATAAGTTTTTCACCGT",3,415.23,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6Y D90F Y121T V181A A190L",5
"lib2","SARS-CoV-2","ATAATAAAAAACAACC",13,144.58,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S19T R27T S113G R124V C150R V153Y Y178H",7
"lib2","SARS-CoV-2","ATAATAAAAAATAGCT",1,24.11,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V37Q G86S V103P N118A K198F",5
"lib2","SARS-CoV-2","ATAATAAAAACATATA",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N D68P",2
"lib2","SARS-CoV-2","ATAATAAAAACCTATT",1,12.09,NA,NA,NA,NA,NA,NA,"stop","A105S T170*",2
"lib2","SARS-CoV-2","ATAATAAAAAGCGGAA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110L Y175G",2
"lib2","SARS-CoV-2","ATAATAAAACTAATGG",2,12.15,6,-4.84,1.21,3,1.17,0.01,">1 nonsynonymous","F70Y N92L F160V",3
"lib2","SARS-CoV-2","ATAATAAAACTTCTCT",2,18.07,10.02,-0.82,0.15,2.3,1.02,0.01,">1 nonsynonymous","T100A T140P P149E",3
"lib2","SARS-CoV-2","ATAATAAAAGAACAAA",11,132.91,9.79,-1.05,0.07,1.94,1.06,0,">1 nonsynonymous","K48R W106E",2
"lib2","SARS-CoV-2","ATAATAAAAGTCTGAC",2,31.19,7.77,-3.06,0.4,1.5,1,0.05,">1 nonsynonymous","G86S L122V I138W",3
"lib2","SARS-CoV-2","ATAATAAAATTCTCAC",10,33.48,8.5,-2.33,0.23,1.66,1.26,0.03,">1 nonsynonymous","S43G G51P Q163F",3
"lib2","SARS-CoV-2","ATAATAAACAGAACAG",1,5.45,9.99,-0.85,0.17,2.92,1.02,0.01,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","ATAATAAACTGACGGT",6,118.83,10.18,-0.66,0.05,2.62,1.01,0,"1 nonsynonymous","D112I",1
"lib2","SARS-CoV-2","ATAATAAAGGAATTTG",14,11.92,NA,NA,NA,NA,NA,NA,"stop","L60P D97K P169* V173R",4
"lib2","SARS-CoV-2","ATAATAAAGGACCAAT",3,79.78,7.83,-3,0.15,2.22,1.18,0.01,">1 nonsynonymous","I104Y Y159N A192E",3
"lib2","SARS-CoV-2","ATAATAAATACCACGT",8,46.25,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","V11P I28Y P54S K87E E141R P149T",6
"lib2","SARS-CoV-2","ATAATAAATACCTTCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49Q",1
"lib2","SARS-CoV-2","ATAATAAATATACGCT",4,22.98,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","V37T I88R",2
"lib2","SARS-CoV-2","ATAATAAATATCGGGC",3,17.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49D D90W D98Q S129R",4
"lib2","SARS-CoV-2","ATAATAAATTTTAATT",1,1.1,NA,NA,NA,NA,NA,NA,"stop","V32L S43F Y91* E186Y",4
"lib2","SARS-CoV-2","ATAATAACAAAAGCGT",7,706.47,9.84,-0.99,0.05,2.16,1.01,0,">1 nonsynonymous","F8L A14S P96T",3
"lib2","SARS-CoV-2","ATAATAACAAATACAG",1,3.13,NA,NA,NA,NA,NA,NA,"stop","D68* Q84S V180N S200L",4
"lib2","SARS-CoV-2","ATAATAACACAAAGAA",1,5.9,10.74,-0.1,0.14,2.9,1,0.01,">1 nonsynonymous","V32A Y39S K56R V173R",4
"lib2","SARS-CoV-2","ATAATAACACCCCTAT",11,138.02,10.81,-0.02,0.04,2.96,1.06,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","ATAATAACCAAGACAG",3,53.34,9.06,-1.77,0.12,1.87,1.09,0.01,"1 nonsynonymous","S19Y",1
"lib2","SARS-CoV-2","ATAATAACCGGAGGCC",8,208.7,9.72,-1.11,0.04,2.69,1.04,0,">1 nonsynonymous","Y39M K132T Q176M",3
"lib2","SARS-CoV-2","ATAATAACCTGAACAC",2,22.72,10.22,-0.61,0.11,2.89,1,0.01,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","ATAATAACGAATAATT",2,23.23,10.83,-0.01,0.06,3,1.03,0,"1 nonsynonymous","E141D",1
"lib2","SARS-CoV-2","ATAATAACGAGAAGCG",8,55.72,9.63,-1.2,0.07,2.23,1.06,0,">1 nonsynonymous","C6V T15A D97C",3
"lib2","SARS-CoV-2","ATAATAACTGTAAACA",2,1.49,NA,NA,NA,NA,NA,NA,"stop","N64* D90G Y119E",3
"lib2","SARS-CoV-2","ATAATAAGAATTACAG",5,100.84,9,-1.84,0.05,2.87,1.1,0,">1 nonsynonymous","A42L G166R",2
"lib2","SARS-CoV-2","ATAATAAGACCGACTG",1,41.77,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58I G101I",2
"lib2","SARS-CoV-2","ATAATAAGAGCCTGTC",6,129.17,10.17,-0.66,0.03,2.96,1.04,0,">1 nonsynonymous","Y121F P169S",2
"lib2","SARS-CoV-2","ATAATAATAAATGTCT",4,134.93,8.64,-2.2,0.09,2.35,1.11,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","ATAATAATAACACTGA",7,87.29,10.52,-0.32,0.04,2.84,1.12,0,">1 nonsynonymous","A22H F160P",2
"lib2","SARS-CoV-2","ATAATAATAAGAACAG",6,206.37,8.65,-2.18,0.06,2.76,1.06,0,">1 nonsynonymous","L60N G117L",2
"lib2","SARS-CoV-2","ATAATAATACCACACA",3,14.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68G T100N",2
"lib2","SARS-CoV-2","ATAATAATACCTAAAC",20,235.23,8.97,-1.86,0.11,1.63,1.11,0,"1 nonsynonymous","I28D",1
"lib2","SARS-CoV-2","ATAATAATGACTCCGA",11,0.15,NA,NA,NA,NA,NA,NA,"stop","D59* A81T L122P G166L",4
"lib2","SARS-CoV-2","ATAATAATGCAGCCTA",2,19.38,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99K C158A",2
"lib2","SARS-CoV-2","ATAATAATGTGTTATA",3,13.12,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","F17K S41I G86T K94V L125S G152T T170N",7
"lib2","SARS-CoV-2","ATAATAATTGGGACTA",12,1.75,NA,NA,NA,NA,NA,NA,"stop","Y50C Y175*",2
"lib2","SARS-CoV-2","ATAATACAAAAAGGAG",2,20.67,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","L122M S129Y E154L G172V",4
"lib2","SARS-CoV-2","ATAATACAAACACCAA",3,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98I N120G",2
"lib2","SARS-CoV-2","ATAATACAAATAGTGC",6,70.46,8.75,-2.09,0.11,1.87,1.1,0,">1 nonsynonymous","K87R T100L L131I Y165L",4
"lib2","SARS-CoV-2","ATAATACAAATCTAGA",6,73.2,9.98,-0.85,0.08,2.25,1.07,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","ATAATACAATCCAATA",9,124.11,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y119S Y143S F156N",3
"lib2","SARS-CoV-2","ATAATACACAAAATAA",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y N24Y K56L W106Q",4
"lib2","SARS-CoV-2","ATAATACACAAATAAA",5,43.24,8.7,-2.13,0.12,1.64,1.13,0.01,">1 nonsynonymous","V103A I142L",2
"lib2","SARS-CoV-2","ATAATACACCTATTAG",10,83.22,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P7F V37W V71K L122Q G146V C150Y F167V",7
"lib2","SARS-CoV-2","ATAATACACGTGAGCC",3,5.09,8.89,-1.94,0.29,1.93,1,0.01,">1 nonsynonymous","T3H A14W P149G",3
"lib2","SARS-CoV-2","ATAATACAGAAAGAGA",1,20.77,10.57,-0.27,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATACAGACTGTTC",16,85.68,6.07,-4.77,1.13,1.5,1.29,0.03,">1 nonsynonymous","D90S P96L",2
"lib2","SARS-CoV-2","ATAATACAGATATGGA",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W L38Y G116K E135L",4
"lib2","SARS-CoV-2","ATAATACAGGATTCAA",5,96.02,10.81,-0.02,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATACCATCTAAGA",5,205.87,10.65,-0.19,0.04,2.89,1.09,0,">1 nonsynonymous","K56D A89S T100I T148L",4
"lib2","SARS-CoV-2","ATAATACCCACTATTC",5,8.3,NA,NA,NA,NA,NA,NA,"stop","T3K A14E I138R Y165I Y175* C195Y",6
"lib2","SARS-CoV-2","ATAATACGATTACAAA",1,31.29,10.67,-0.17,0.04,2.88,1.1,0,"1 nonsynonymous","Y178W",1
"lib2","SARS-CoV-2","ATAATACGCACTCCAT",5,68.37,10.85,0.02,0.04,2.94,1.05,0,">1 nonsynonymous","I2G K48A T100L P197F",4
"lib2","SARS-CoV-2","ATAATACGCGAGATCA",6,41.84,10.57,-0.27,0.08,2.81,1.16,0,">1 nonsynonymous","L5N E141F",2
"lib2","SARS-CoV-2","ATAATACGGGAACTTA",4,36.87,10.19,-0.64,0.09,2.63,1.02,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","ATAATACTAGGAAAAC",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G D68T T100P",3
"lib2","SARS-CoV-2","ATAATACTGTGGCGGG",2,53.99,9.13,-1.7,0.06,2.86,1.13,0,"1 nonsynonymous","G117E",1
"lib2","SARS-CoV-2","ATAATACTTATTTAGG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","A89* N107M",2
"lib2","SARS-CoV-2","ATAATACTTCCAAAGC",4,40.38,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V77M N107H N157L",3
"lib2","SARS-CoV-2","ATAATAGAAACGGACT",1,15.73,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V11F A22P",2
"lib2","SARS-CoV-2","ATAATAGAACAAGAAG",8,28.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S184P T201L",2
"lib2","SARS-CoV-2","ATAATAGAATAAACGT",1,7.62,7.88,-2.95,0.29,2.98,1.06,0.01,">1 nonsynonymous","I2N Q79R G116L",3
"lib2","SARS-CoV-2","ATAATAGACATAGCGT",3,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P F99K I138N L188M",4
"lib2","SARS-CoV-2","ATAATAGACTGATCCT",3,17.64,9.8,-1.03,0.11,2.9,1.06,0.01,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","ATAATAGAGCAACATC",6,47.34,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40Q D68P A105Y N130E",4
"lib2","SARS-CoV-2","ATAATAGAGGAATAAA",12,100.51,10.71,-0.13,0.04,2.9,1.09,0,">1 nonsynonymous","K132I A190D",2
"lib2","SARS-CoV-2","ATAATAGAGGTGTTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","S41F G86* Q176R",3
"lib2","SARS-CoV-2","ATAATAGAGTAGAGGT",3,38.13,6,-4.84,1.93,1.5,1.15,0.01,">1 nonsynonymous","N1T F17S P161L",3
"lib2","SARS-CoV-2","ATAATAGAGTTACTCT",2,31.93,10.8,-0.03,0.06,2.81,1.21,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAATAGATAAAATCG",9,309.11,8.7,-2.14,0.07,3,1.04,0,"1 nonsynonymous","N171R",1
"lib2","SARS-CoV-2","ATAATAGATGAATGAA",2,68.83,9.65,-1.18,0.1,2.17,1.12,0,">1 nonsynonymous","K87T L122G K132F Y165F",4
"lib2","SARS-CoV-2","ATAATAGCGGTACATA",2,46.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64S A89Y P96T Y165W T201G",5
"lib2","SARS-CoV-2","ATAATAGGCAAGAAAT",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L N64Y Q144H T201L",4
"lib2","SARS-CoV-2","ATAATAGGGAACAACA",4,41.45,7.76,-3.07,0.17,1.89,1.17,0.01,">1 nonsynonymous","W106K K114P Q168A T201S",4
"lib2","SARS-CoV-2","ATAATAGGGACGGACG",3,65.36,9.26,-1.58,0.06,2.82,1.17,0,">1 nonsynonymous","K26Q S41K K87E",3
"lib2","SARS-CoV-2","ATAATAGGTGTGCTTA",3,29.33,9.74,-1.1,0.14,1.86,1.08,0.01,">1 nonsynonymous","N40K V103T V153F K198S",4
"lib2","SARS-CoV-2","ATAATAGGTTCCCACA",3,41.49,10.82,-0.02,0.07,2.97,1.04,0,">1 nonsynonymous","I2G L188F",2
"lib2","SARS-CoV-2","ATAATAGTAATTACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* T140*",2
"lib2","SARS-CoV-2","ATAATAGTAGTTGAGA",5,76.47,6,-4.84,1.8,1.5,1.18,0.03,">1 nonsynonymous","N30L Y91F V103L R127D T148V G172V",6
"lib2","SARS-CoV-2","ATAATAGTATACATAT",9,1.3,NA,NA,NA,NA,NA,NA,"stop","G9* R16N S41V S45G D59G W106S G117D T201S",8
"lib2","SARS-CoV-2","ATAATAGTCTTATGGT",2,11.19,10.72,-0.11,0.07,2.94,1.09,0,"1 nonsynonymous","I138R",1
"lib2","SARS-CoV-2","ATAATAGTTGCTTTTT",1,63.13,10.68,-0.15,0.04,2.94,1.03,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","ATAATATAAAAACACA",8,58.83,10.78,-0.06,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATATAACAACCAG",4,128.87,9.93,-0.91,0.06,2.35,1.03,0,">1 nonsynonymous","F47A G196W",2
"lib2","SARS-CoV-2","ATAATATAATGACCCC",4,22.33,6.95,-3.89,0.34,1.5,1.16,0.02,">1 nonsynonymous","V11N W106F K128Y E135A",4
"lib2","SARS-CoV-2","ATAATATACACAGAAT",9,178.04,10.69,-0.15,0.06,2.91,1.07,0,">1 nonsynonymous","K132E S139D",2
"lib2","SARS-CoV-2","ATAATATACACATCCC",1,13.5,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D34G D59S P96Y G116I",4
"lib2","SARS-CoV-2","ATAATATATAGAACAA",1,6.79,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","A33P Y119K G146P",3
"lib2","SARS-CoV-2","ATAATATATCAGGGTT",3,33.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4R F70K V77E A89T C158R",5
"lib2","SARS-CoV-2","ATAATATATCTGCCAT",2,13.31,10.78,-0.05,0.08,3,1.03,0,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","ATAATATCAAATCCGT",2,0.73,NA,NA,NA,NA,NA,NA,"stop","W23Q Y35T K56* G83S K94G Y119A R124L R136L",8
"lib2","SARS-CoV-2","ATAATATCAAGGCTAC",5,21.36,9.82,-1.02,0.23,1.85,1,0.02,">1 nonsynonymous","A33S L122G G146C",3
"lib2","SARS-CoV-2","ATAATATCATCACTTA",2,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C V52N F62I Y119W R127L",5
"lib2","SARS-CoV-2","ATAATATCGAAACGAT",4,8.38,NA,NA,NA,NA,NA,NA,"stop","T85Y Y178*",2
"lib2","SARS-CoV-2","ATAATATCTGCAAAAA",7,38.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14V G146A C158P",3
"lib2","SARS-CoV-2","ATAATATCTGCTACTA",5,101.54,10.88,0.05,0.07,3,1.03,0,"1 nonsynonymous","P197H",1
"lib2","SARS-CoV-2","ATAATATCTTTAGCGT",2,35.06,10.45,-0.39,0.07,2.91,1.06,0,">1 nonsynonymous","A22R Y121Q",2
"lib2","SARS-CoV-2","ATAATATGCCCCATAT",2,35.97,10.71,-0.13,0.05,2.94,1.06,0,">1 nonsynonymous","R16F T201R",2
"lib2","SARS-CoV-2","ATAATATGCTCACGAA",3,63.77,10.24,-0.59,0.05,2.73,1.01,0,">1 nonsynonymous","V71L G196W",2
"lib2","SARS-CoV-2","ATAATATTACTCTGTA",5,32.45,10.87,0.03,0.05,2.98,1.04,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","ATAATATTAGCCAGTT",3,6.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14Y Y35M V103S I138M",4
"lib2","SARS-CoV-2","ATAATATTATACTTAG",6,72.66,7.21,-3.62,0.13,1.87,1.09,0,"1 nonsynonymous","C158M",1
"lib2","SARS-CoV-2","ATAATATTCTACTTGT",1,83.37,10.82,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","V32E",1
"lib2","SARS-CoV-2","ATAATATTCTCACTAA",3,48.21,10.77,-0.06,0.05,2.94,1.06,0,">1 nonsynonymous","G83Y T140E",2
"lib2","SARS-CoV-2","ATAATATTGAATGTAT",2,83.83,9.76,-1.07,0.09,2.16,1.07,0,">1 nonsynonymous","V103L L122S",2
"lib2","SARS-CoV-2","ATAATATTTCGTCAGT",17,120.27,6.24,-4.6,0.53,1.5,1.17,0.01,"1 nonsynonymous","G101Y",1
"lib2","SARS-CoV-2","ATAATCAAAAACCACG",4,37.59,8.74,-2.09,0.09,2.01,1.09,0,">1 nonsynonymous","G9K A89N V115D",3
"lib2","SARS-CoV-2","ATAATCAAACATAATT",5,0.69,NA,NA,NA,NA,NA,NA,"stop","P82* K87W G152L",3
"lib2","SARS-CoV-2","ATAATCAAAGCGTTGC",3,33.55,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","E10W S19L S129N",3
"lib2","SARS-CoV-2","ATAATCAAATTTTGCC",2,61.02,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G101L F160M Q176H",3
"lib2","SARS-CoV-2","ATAATCAACCTCATAT",2,46.24,10.76,-0.08,0.07,2.98,1.06,0,"1 nonsynonymous","L187N",1
"lib2","SARS-CoV-2","ATAATCAAGAATAACG",9,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I V103E Q176S",3
"lib2","SARS-CoV-2","ATAATCAAGTTATACA",1,7.32,6.41,-4.42,0.33,1.5,1.09,0.01,">1 nonsynonymous","L57W S69W I104Y K128F",4
"lib2","SARS-CoV-2","ATAATCAATAGCCACT",1,9.08,10.36,-0.48,0.09,2.86,1.05,0,">1 nonsynonymous","V37T N107C",2
"lib2","SARS-CoV-2","ATAATCAATTAATAGA",2,35.46,10.62,-0.22,0.07,2.85,1.15,0,">1 nonsynonymous","T100C T140R",2
"lib2","SARS-CoV-2","ATAATCACAACTAAGG",4,69.55,8.27,-2.56,0.32,1.5,1.07,0.05,">1 nonsynonymous","N110L Y159W T170V",3
"lib2","SARS-CoV-2","ATAATCACCAAATTTG",4,16.69,6,-4.84,2,1.91,1.09,0,">1 nonsynonymous","N1S V20L C49S Q84L N107P G146L",6
"lib2","SARS-CoV-2","ATAATCACTCGAGGCA",3,0.85,NA,NA,NA,NA,NA,NA,"stop","D90V F126*",2
"lib2","SARS-CoV-2","ATAATCAGAATAAAGG",13,102.74,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F99R L122I",2
"lib2","SARS-CoV-2","ATAATCAGCTCATATG",9,145.82,10.53,-0.31,0.05,2.94,1.07,0,"1 nonsynonymous","K87I",1
"lib2","SARS-CoV-2","ATAATCAGGATTCATA",1,18.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A18R I72R N157V",3
"lib2","SARS-CoV-2","ATAATCATAAAAACCA",14,45.58,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G101I W106R G117T",3
"lib2","SARS-CoV-2","ATAATCATAACCCCAG",2,22.62,10.74,-0.1,0.09,2.82,1.19,0,"1 nonsynonymous","G152N",1
"lib2","SARS-CoV-2","ATAATCATAAGCTACT",4,25.67,6.45,-4.39,0.63,1.5,1.15,0.03,">1 nonsynonymous","K48P T201K",2
"lib2","SARS-CoV-2","ATAATCATGAAAGACA",3,35.62,8.51,-2.33,0.18,2.1,1.11,0.01,">1 nonsynonymous","F8M T85S R127M T201M",4
"lib2","SARS-CoV-2","ATAATCATTAGATTAT",3,4.89,NA,NA,NA,NA,NA,NA,"stop","G83*",1
"lib2","SARS-CoV-2","ATAATCATTCATTCAA",7,92.88,10.23,-0.61,0.07,2.57,1.08,0,">1 nonsynonymous","A42S Y123L P149R",3
"lib2","SARS-CoV-2","ATAATCATTTTCCGAA",11,51.63,9.77,-1.07,0.1,2.17,1.04,0.01,">1 nonsynonymous","T15M D34P L60V",3
"lib2","SARS-CoV-2","ATAATCCAATTTCGTG",4,74.9,10.66,-0.18,0.07,2.89,1.11,0,"1 nonsynonymous","N151F",1
"lib2","SARS-CoV-2","ATAATCCAGCACAAAA",2,6.93,6.57,-4.26,0.3,2.39,1.18,0.01,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","ATAATCCATAATAACT",4,2.24,NA,NA,NA,NA,NA,NA,"stop","V20G A42* V65* D98Q T140S",5
"lib2","SARS-CoV-2","ATAATCCATAATAGAA",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G T85P T170Q",3
"lib2","SARS-CoV-2","ATAATCCATACTCAAG",6,51.92,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","ATAATCCATTCTTTAA",6,27.85,9.15,-1.68,0.25,1.51,1.01,0.03,">1 nonsynonymous","T63S T100M K114W P161V T201F",5
"lib2","SARS-CoV-2","ATAATCCCCAAAAACG",2,104.39,10.03,-0.81,0.05,2.81,1.05,0,">1 nonsynonymous","Y91H V173A",2
"lib2","SARS-CoV-2","ATAATCCCCGAAACCA",2,30.94,10.83,-0.01,0.04,2.94,1.08,0,">1 nonsynonymous","K128E N130E",2
"lib2","SARS-CoV-2","ATAATCCGATCAACGG",9,42.57,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C49K D98F Y119S",3
"lib2","SARS-CoV-2","ATAATCCGCAATAACT",4,64.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R27M P82S Y123G Y178T",4
"lib2","SARS-CoV-2","ATAATCCTACCAAAAC",6,79.32,10.62,-0.22,0.04,2.93,1.07,0,">1 nonsynonymous","S129Y P149H",2
"lib2","SARS-CoV-2","ATAATCCTCGACAGTA",2,43.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9V T100V W106E G116I P133G C150P",6
"lib2","SARS-CoV-2","ATAATCCTTAAGAATA",4,75.92,10,-0.84,0.07,2.61,1.06,0,">1 nonsynonymous","A33K F62G",2
"lib2","SARS-CoV-2","ATAATCGAAAAAAGAG",3,81.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F62V R136L Y165K",3
"lib2","SARS-CoV-2","ATAATCGACAATTTTT",4,3.12,NA,NA,NA,NA,NA,NA,"stop","P7Y N40A Y50* P96I F160V",5
"lib2","SARS-CoV-2","ATAATCGAGCACATTT",4,69.95,10.77,-0.06,0.06,2.94,1.09,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","ATAATCGATATGCAGT",1,20.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G51V R73C E141G P169I S184H",5
"lib2","SARS-CoV-2","ATAATCGATCATGTGT",4,71.49,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11C F17K K198I",3
"lib2","SARS-CoV-2","ATAATCGCACACAATA",5,83.85,9.98,-0.85,0.04,2.84,1.06,0,">1 nonsynonymous","Y121V I138V",2
"lib2","SARS-CoV-2","ATAATCGCTGATGACA",4,53.09,10.4,-0.44,0.04,2.86,1.09,0,">1 nonsynonymous","N1I K114N K132L",3
"lib2","SARS-CoV-2","ATAATCGCTGGTGACT",1,14.76,10.68,-0.16,0.07,3,1.05,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","ATAATCGGGTCAAACA",4,103.96,10.77,-0.07,0.03,2.97,1.04,0,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","ATAATCGGTAAATACC",10,26.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11T I88S D98C N110I G174R",5
"lib2","SARS-CoV-2","ATAATCGTTACTCCTA",6,23.93,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L60M Y91F R127I Y159R",4
"lib2","SARS-CoV-2","ATAATCTACAATTTAA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","F17I S43P I80* T140D G146* F167*",6
"lib2","SARS-CoV-2","ATAATCTAGTAATAAG",5,30.55,9.08,-1.76,0.33,1.5,1,0.06,">1 nonsynonymous","V37K T46E S69I",3
"lib2","SARS-CoV-2","ATAATCTATACCTCAT",5,100.14,10.67,-0.17,0.03,2.92,1.06,0,">1 nonsynonymous","N130D R136Q",2
"lib2","SARS-CoV-2","ATAATCTCAGACCTAT",13,173.94,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D68V Y143R",2
"lib2","SARS-CoV-2","ATAATCTGGTGGGGTT",2,17.95,6.42,-4.42,0.45,1.69,1.08,0.02,">1 nonsynonymous","K56M N64T K94M Y119Q R136S L162P",6
"lib2","SARS-CoV-2","ATAATCTGTAATGGCC",2,15.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13H R25V F62S N110S P177V",5
"lib2","SARS-CoV-2","ATAATCTGTGCGAGCA",10,206.85,10.89,0.05,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATCTGTTGTTGCC",6,46.46,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","V181R",1
"lib2","SARS-CoV-2","ATAATCTTAATAGTGT",8,145.22,10.67,-0.16,0.04,2.93,1.06,0,">1 nonsynonymous","S36W S43K T55P",3
"lib2","SARS-CoV-2","ATAATCTTTCACAAAA",5,72.19,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S43D F156V P177T",3
"lib2","SARS-CoV-2","ATAATGAAAAACAAGT",1,2.18,NA,NA,NA,NA,NA,NA,"stop","V77* L122S N157T",3
"lib2","SARS-CoV-2","ATAATGAAACGTCAGT",2,35.15,8.49,-2.35,0.31,1.5,1.1,0.04,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","ATAATGAAATCAATTA",2,23.08,10.07,-0.76,0.12,2.02,1,0.01,">1 nonsynonymous","S41L P96R",2
"lib2","SARS-CoV-2","ATAATGAATAGGAGTT",10,135.11,10.84,0.01,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATGAATATTCAAC",1,12.65,6.93,-3.9,0.64,1.5,1.11,0.05,">1 nonsynonymous","S19T R73E Q163T",3
"lib2","SARS-CoV-2","ATAATGAATCGATCAT",2,1.62,NA,NA,NA,NA,NA,NA,"stop","I104* P149K",2
"lib2","SARS-CoV-2","ATAATGAATTCAGACC",4,20.66,9.02,-1.82,0.09,2.93,1.05,0,">1 nonsynonymous","P149M Q168L",2
"lib2","SARS-CoV-2","ATAATGACACCTCGAT",4,32.35,9.71,-1.13,0.1,2.17,1,0,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","ATAATGACAGACAAGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L N40K I88M K94M I104G Y121H G146L L183K",8
"lib2","SARS-CoV-2","ATAATGACAGCCCAAG",5,89.12,8.47,-2.37,0.1,1.94,1.05,0,">1 nonsynonymous","L162T G174H",2
"lib2","SARS-CoV-2","ATAATGACATAACTAC",3,19.97,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","T3V F12N K48S K87M S113V S129T Y175C",7
"lib2","SARS-CoV-2","ATAATGACATACTTTT",17,280.8,10.23,-0.61,0.03,2.89,1.1,0,"1 nonsynonymous","Q168M",1
"lib2","SARS-CoV-2","ATAATGACATCACCTA",9,236.44,10.83,0,0.05,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATGACATTCGGAG",3,57.88,10.69,-0.14,0.06,2.95,1.03,0,">1 nonsynonymous","T3G N58P P149T",3
"lib2","SARS-CoV-2","ATAATGACCACACCAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATAATGACGGAAAATT",7,139.39,9.58,-1.25,0.04,2.78,1.05,0,">1 nonsynonymous","P149F G155V",2
"lib2","SARS-CoV-2","ATAATGACTAACGTCG",8,60.83,8.81,-2.03,0.22,1.5,1.09,0.02,">1 nonsynonymous","N40T D97H F185A",3
"lib2","SARS-CoV-2","ATAATGACTGCAAATA",8,55.36,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A81N F99W P161R",3
"lib2","SARS-CoV-2","ATAATGAGGTTGAACC",9,92.24,6,-4.84,2,3,1.25,0,">1 nonsynonymous","Y91P D98Y V173C",3
"lib2","SARS-CoV-2","ATAATGAGTTATTTAA",2,12.02,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","S45Y R78G T100H Q176T V181Y",5
"lib2","SARS-CoV-2","ATAATGATAGACCCGG",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I Y123M E186Y",3
"lib2","SARS-CoV-2","ATAATGATATAGCTAT",7,77.57,6,-4.84,1.47,1.5,1.12,0,">1 nonsynonymous","V32N Y91S K114G R136S K198A",5
"lib2","SARS-CoV-2","ATAATGATATGGGCAG",9,1.55,NA,NA,NA,NA,NA,NA,"stop","T3E F44S E141* C158Y T201P",5
"lib2","SARS-CoV-2","ATAATGATCGCCTAGT",6,73.29,10.05,-0.79,0.05,2.33,1.07,0,">1 nonsynonymous","N40L G51L P197V",3
"lib2","SARS-CoV-2","ATAATGCAAACCCGTT",7,39.82,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","Q79R V103S S139K",3
"lib2","SARS-CoV-2","ATAATGCAATCATTCA",8,268.47,10.77,-0.07,0.03,2.96,1.05,0,">1 nonsynonymous","L5K T63S P149K",3
"lib2","SARS-CoV-2","ATAATGCACACCTATA",4,28.76,9.23,-1.6,0.18,1.5,1.02,0.02,">1 nonsynonymous","N58T Y66G",2
"lib2","SARS-CoV-2","ATAATGCAGACTAATC",9,0.62,NA,NA,NA,NA,NA,NA,"stop","I2G S164* G174K",3
"lib2","SARS-CoV-2","ATAATGCAGACTAGCG",18,186.72,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S36V D59V C61F A89L",4
"lib2","SARS-CoV-2","ATAATGCAGTACGAAC",11,43.19,6.3,-4.54,0.39,1.5,1.12,0.01,">1 nonsynonymous","G101Q F160S",2
"lib2","SARS-CoV-2","ATAATGCATAGTTTGA",5,12.69,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33T Y93N G101S",3
"lib2","SARS-CoV-2","ATAATGCCAAACGAGA",10,12.17,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I2D V71A P96Y A145W G152Q P197W",6
"lib2","SARS-CoV-2","ATAATGCCCCAAGGGT",8,108.24,10.26,-0.57,0.04,2.78,1.14,0,">1 nonsynonymous","S36L E186G",2
"lib2","SARS-CoV-2","ATAATGCGCGCCGATC",9,28.7,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L38Q Y123P E141C",3
"lib2","SARS-CoV-2","ATAATGCGGACCAACG",1,38.34,11.03,0.2,0.07,2.99,1.01,0,">1 nonsynonymous","I2S I28F",2
"lib2","SARS-CoV-2","ATAATGCTAATATGGA",6,1.02,NA,NA,NA,NA,NA,NA,"stop","G51S G146H Q176* V182A",4
"lib2","SARS-CoV-2","ATAATGCTACTACAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","ATAATGCTGACACCTA",6,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I D68E V103Q S129I",4
"lib2","SARS-CoV-2","ATAATGGAAACTAAAC",1,50.94,NA,NA,NA,NA,NA,NA,"stop","S29A N64G K94*",3
"lib2","SARS-CoV-2","ATAATGGATATACTAA",8,281.59,8.5,-2.34,0.09,2.75,1.03,0,">1 nonsynonymous","Y119T P177S",2
"lib2","SARS-CoV-2","ATAATGGATATATAAA",11,69.83,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P7V C102R",2
"lib2","SARS-CoV-2","ATAATGGCATCGATGT",4,88.39,7.54,-3.3,0.14,1.64,1.1,0.01,"1 nonsynonymous","C150P",1
"lib2","SARS-CoV-2","ATAATGGCCATTAAGA",7,234.01,10.18,-0.66,0.05,2.77,1.06,0,">1 nonsynonymous","A22E F47Y C61A E154K",4
"lib2","SARS-CoV-2","ATAATGGCCCACAAAA",2,54.43,10.47,-0.37,0.06,2.81,1.18,0,">1 nonsynonymous","N151I F160A",2
"lib2","SARS-CoV-2","ATAATGGCGAACCATG",10,72.4,10.79,-0.05,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATGGGACGTCTAA",17,83.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M G152I K198R",3
"lib2","SARS-CoV-2","ATAATGGTGAGCGATG",13,5.84,NA,NA,NA,NA,NA,NA,"stop","E10* P82L P96M G117K N130A Y178D",6
"lib2","SARS-CoV-2","ATAATGTAATAAATTT",4,36.04,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9A S53F Y93R",3
"lib2","SARS-CoV-2","ATAATGTAATACACCT",3,1.22,NA,NA,NA,NA,NA,NA,"stop","G9T K56* V77L",3
"lib2","SARS-CoV-2","ATAATGTATAATTGAC",20,244.07,10.81,-0.03,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATGTCAAAAAGTG",3,19.25,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D98W F134L P161L",3
"lib2","SARS-CoV-2","ATAATGTCTAGAGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T N118A Y165S",3
"lib2","SARS-CoV-2","ATAATGTCTAGGACTA",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24S P133F N151R",3
"lib2","SARS-CoV-2","ATAATGTGCCCTATAG",6,153.84,10.79,-0.05,0.03,2.99,1.04,0,">1 nonsynonymous","R27S S45D",2
"lib2","SARS-CoV-2","ATAATGTGTGCGAAAG",8,77.57,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S53Q N64F G83S K87I C158M",5
"lib2","SARS-CoV-2","ATAATGTTAAACATTC",2,109.24,10.83,0,0.03,2.96,1.06,0,"1 nonsynonymous","I2G",1
"lib2","SARS-CoV-2","ATAATGTTATAAATTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86I V181T",2
"lib2","SARS-CoV-2","ATAATGTTCATATCAG",2,81.8,10.34,-0.5,0.07,2.77,1.03,0,">1 nonsynonymous","S43D T85W P133A",3
"lib2","SARS-CoV-2","ATAATGTTTGACCTTT",6,16.56,NA,NA,NA,NA,NA,NA,"stop","S19H D34A G86* L95M Y143F",5
"lib2","SARS-CoV-2","ATAATTAACAGCAAGG",4,0.71,NA,NA,NA,NA,NA,NA,"stop","N24V C150*",2
"lib2","SARS-CoV-2","ATAATTAACATCAAAT",5,151.04,10.71,-0.12,0.05,2.9,1.1,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","ATAATTAAGACGCTGA",3,6.64,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15N V20K R27V S36Y I104W F134L",6
"lib2","SARS-CoV-2","ATAATTAAGCCTAATG",2,69.03,10.8,-0.04,0.07,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTAAGTTGTGGT",6,32.63,7.43,-3.41,0.38,1.5,1.03,0.04,">1 nonsynonymous","T15R K56Q D137G Y143W",4
"lib2","SARS-CoV-2","ATAATTAATCACGAGT",1,7.31,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","Y143N R179S",2
"lib2","SARS-CoV-2","ATAATTACACAATATG",10,46,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6Y D90I Y121R L131Y A145C",5
"lib2","SARS-CoV-2","ATAATTACACCTGAAG",7,100.63,9.97,-0.86,0.11,2.01,1,0,">1 nonsynonymous","F8L S41L A81V N109K",4
"lib2","SARS-CoV-2","ATAATTACCAACTCAG",4,77.47,10.83,-0.01,0.07,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTACCTTTTGGA",1,15.01,9.64,-1.19,0.16,1.97,1.11,0.01,">1 nonsynonymous","N13G S139V",2
"lib2","SARS-CoV-2","ATAATTACTAGGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6K V65*",2
"lib2","SARS-CoV-2","ATAATTACTGGTGAGG",14,276.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35Q D90T N120V G146C T201E",5
"lib2","SARS-CoV-2","ATAATTACTGTAAAGA",10,3.13,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","ATAATTAGCCAAAAGT",4,99.63,10.61,-0.22,0.04,2.91,1.06,0,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","ATAATTAGCTACAACA",3,3.08,NA,NA,NA,NA,NA,NA,"stop","A18* I138* P169W",3
"lib2","SARS-CoV-2","ATAATTAGGACAATTA",8,135.38,8.04,-2.79,0.18,1.68,1.1,0.01,">1 nonsynonymous","T85K P133C G155R G174E",4
"lib2","SARS-CoV-2","ATAATTAGGGCCACCG",6,76.08,10.81,-0.03,0.04,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTATAAATGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S43I Y50D L60E T85P D98* Q144M",6
"lib2","SARS-CoV-2","ATAATTATACTTGCAA",14,173.68,10.88,0.05,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTATATAACATA",1,49.4,9.02,-1.82,0.1,2.8,1.07,0,">1 nonsynonymous","K56A F167W S200P",3
"lib2","SARS-CoV-2","ATAATTATCAAACCTA",5,26.59,7.09,-3.74,0.46,1.5,1.03,0.07,">1 nonsynonymous","A42M Y91E A145S R179M",4
"lib2","SARS-CoV-2","ATAATTATCAATGTTC",11,81.02,9.38,-1.45,0.13,1.5,1.03,0.01,">1 nonsynonymous","P82L V115T",2
"lib2","SARS-CoV-2","ATAATTATCGACATTA",2,58.04,9.82,-1.02,0.09,2.22,1.05,0,">1 nonsynonymous","F12Y A190V",2
"lib2","SARS-CoV-2","ATAATTATCTACAATA",2,46.43,10.16,-0.68,0.09,2.73,1.01,0,">1 nonsynonymous","N30T T140G",2
"lib2","SARS-CoV-2","ATAATTATGATTATTA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","T3A F8* A14P S36E D59T G83R",6
"lib2","SARS-CoV-2","ATAATTATTAAGGATA",1,6.62,8.31,-2.52,0.12,2.64,1.06,0,">1 nonsynonymous","C61A N118M Q168K P197Q",4
"lib2","SARS-CoV-2","ATAATTATTACAAGAA",2,10,6.61,-4.23,0.4,1.94,1.17,0.02,">1 nonsynonymous","V52S Y119W G146H",3
"lib2","SARS-CoV-2","ATAATTCAAAACGTAA",9,128.41,10.57,-0.27,0.05,2.93,1.08,0,"1 nonsynonymous","T55C",1
"lib2","SARS-CoV-2","ATAATTCAACCAGAAA",5,106.47,10.78,-0.06,0.04,2.94,1.07,0,"1 nonsynonymous","K26L",1
"lib2","SARS-CoV-2","ATAATTCAACCTAAAA",1,38.22,10.69,-0.15,0.06,2.88,1.09,0,">1 nonsynonymous","G83Y K114E",2
"lib2","SARS-CoV-2","ATAATTCAATACCCCC",2,64.42,10.83,0,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTCACACAGATA",5,65.82,10.69,-0.14,0.04,2.92,1.1,0,"1 nonsynonymous","S184C",1
"lib2","SARS-CoV-2","ATAATTCAGAGCAGGC",11,71.78,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S41R T85R D98F R124W P161S",5
"lib2","SARS-CoV-2","ATAATTCAGCGATCCT",9,205.46,10.86,0.02,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTCAGGGGACAT",8,60.16,10.04,-0.8,0.11,2.39,1.19,0.01,">1 nonsynonymous","S36Y S41P",2
"lib2","SARS-CoV-2","ATAATTCCATCCCCCC",21,417.03,10.82,-0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTCCCATTAAAC",6,32.21,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D59I A89Q T100C N107R K128R",5
"lib2","SARS-CoV-2","ATAATTCCGAGACCTA",2,22.93,9.45,-1.38,0.15,1.68,1.02,0.01,"1 nonsynonymous","F17R",1
"lib2","SARS-CoV-2","ATAATTCCGATGACCA",27,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K N107L R127M",3
"lib2","SARS-CoV-2","ATAATTCCGATTGTTA",2,1.16,NA,NA,NA,NA,NA,NA,"stop","F156V K198*",2
"lib2","SARS-CoV-2","ATAATTCCGTCGAACT",14,138.19,8.01,-2.83,0.16,1.5,1.11,0.01,">1 nonsynonymous","L57T T100L N109D",3
"lib2","SARS-CoV-2","ATAATTCGCAACAACA",4,0,NA,NA,NA,NA,NA,NA,"stop","F44* V52I A67T Y91L S129T L183S A192W",7
"lib2","SARS-CoV-2","ATAATTCGTAAATCAT",5,22.58,6,-4.84,2,2.76,1.11,0,">1 nonsynonymous","Y35N A81D D90R P96V C102V C150K N157M",7
"lib2","SARS-CoV-2","ATAATTCGTACCCCAC",12,6.11,NA,NA,NA,NA,NA,NA,"stop","Y119* P149*",2
"lib2","SARS-CoV-2","ATAATTCTAAACCCGT",2,50.11,9.07,-1.77,0.09,2.74,1.15,0,">1 nonsynonymous","N4Q L60S N151T N171L P197Q",5
"lib2","SARS-CoV-2","ATAATTCTAAACGTTG",8,107.31,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G166W P177E",2
"lib2","SARS-CoV-2","ATAATTCTGGACAATC",1,77.22,10.71,-0.12,0.03,2.91,1.11,0,"1 nonsynonymous","S53P",1
"lib2","SARS-CoV-2","ATAATTGAAAACTAAT",5,22.13,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Q84R K87S L131R",3
"lib2","SARS-CoV-2","ATAATTGAAAGGACAA",12,456.75,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10H S29L R78L Q176V",4
"lib2","SARS-CoV-2","ATAATTGAAAGGCTTA",3,8.58,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I28A F70T",2
"lib2","SARS-CoV-2","ATAATTGAAGTTTTAA",1,23.81,9.59,-1.25,0.17,2.4,1.01,0.01,">1 nonsynonymous","L5G C31W S129L",3
"lib2","SARS-CoV-2","ATAATTGACTACTACT",4,40.25,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L38P K128M G146F P169R",4
"lib2","SARS-CoV-2","ATAATTGAGTCAGTGA",2,39.73,8.7,-2.13,0.19,1.5,1.07,0.02,">1 nonsynonymous","A14L V32H P96N V173R",4
"lib2","SARS-CoV-2","ATAATTGATACTTGCT",13,204.04,10.86,0.02,0.05,2.92,1.07,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","ATAATTGATCCCACAG",4,0.92,NA,NA,NA,NA,NA,NA,"stop","A33Q N92A K128* I138K",4
"lib2","SARS-CoV-2","ATAATTGCAAACGATT",19,3.14,NA,NA,NA,NA,NA,NA,"stop","G9* Y39V",2
"lib2","SARS-CoV-2","ATAATTGGATAGGGGC",1,23.45,10.13,-0.7,0.05,3,1,0,">1 nonsynonymous","E141M E154I",2
"lib2","SARS-CoV-2","ATAATTGGCACTGCCA",1,27.87,10.7,-0.13,0.04,2.93,1.1,0,"1 nonsynonymous","K48V",1
"lib2","SARS-CoV-2","ATAATTGGCCCCGATA",5,9.17,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y91M L183R",2
"lib2","SARS-CoV-2","ATAATTGGCTCTTGAA",13,222.46,10.81,-0.03,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAATTGTAGGCTGCT",6,46.03,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K87R G101H V115L T193I",4
"lib2","SARS-CoV-2","ATAATTGTGATAAAAC",8,3.35,NA,NA,NA,NA,NA,NA,"stop","K48T Q144*",2
"lib2","SARS-CoV-2","ATAATTTAAACGAATG",5,96.18,9.91,-0.92,0.03,2.88,1.07,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","ATAATTTAACGATAGC",4,93.07,9.85,-0.99,0.06,2.5,1.04,0,">1 nonsynonymous","R78S A105N",2
"lib2","SARS-CoV-2","ATAATTTAATAATCAT",1,14.9,9.89,-0.94,0.18,2.33,1,0.01,">1 nonsynonymous","A33P S129I L183F",3
"lib2","SARS-CoV-2","ATAATTTACCAGTAAC",2,1.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","ATAATTTACGAAGACT",4,55.12,10.24,-0.59,0.04,2.97,1.01,0,">1 nonsynonymous","G9S L60P",2
"lib2","SARS-CoV-2","ATAATTTACTAGTTAT",1,13.84,10,-0.83,0.2,1.97,1,0.01,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","ATAATTTAGAATCCAA",2,50.22,9.25,-1.58,0.04,2.97,1.05,0,">1 nonsynonymous","S41A G117T",2
"lib2","SARS-CoV-2","ATAATTTAGTAGGCTT",1,1.72,NA,NA,NA,NA,NA,NA,"stop","L5T V52C A105* L122C P149C",5
"lib2","SARS-CoV-2","ATAATTTATTGAAGCG",6,0.68,NA,NA,NA,NA,NA,NA,"stop","W23G P96G G117* Q176R T201*",5
"lib2","SARS-CoV-2","ATAATTTCACAACTAA",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Q Y121H N157F",3
"lib2","SARS-CoV-2","ATAATTTCACTAAATC",3,123.38,9.23,-1.6,0.07,2.55,1.08,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","ATAATTTCCAACTTAG",2,29.77,10.58,-0.26,0.05,2.95,1.06,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","ATAATTTCTAACCTAA",1,36.75,10.51,-0.33,0.06,2.94,1.05,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","ATAATTTGACAATTTG",10,305.64,10.68,-0.16,0.03,2.91,1.09,0,">1 nonsynonymous","N64Y S184K",2
"lib2","SARS-CoV-2","ATAATTTGATGAAGTT",12,100.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51S N107R Y123V",3
"lib2","SARS-CoV-2","ATAATTTGCCAATACT",17,90.32,6.24,-4.6,0.68,1.5,1.16,0.03,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","ATAATTTGTGATATAA",7,68.87,10.71,-0.13,0.05,2.94,1.06,0,">1 nonsynonymous","G9E V37D N64C",3
"lib2","SARS-CoV-2","ATAATTTTCGCTGATC",10,74.59,9.13,-1.71,0.08,1.8,1.06,0,">1 nonsynonymous","T85G P96N A105T",3
"lib2","SARS-CoV-2","ATAATTTTCGTATATA",4,26.89,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","F70D",1
"lib2","SARS-CoV-2","ATAATTTTTTAAAAAA",4,137.1,10.16,-0.68,0.05,2.85,1.08,0,"1 nonsynonymous","C31R",1
"lib2","SARS-CoV-2","ATACAAAAACATCTTT",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y N130R G152A C158W",4
"lib2","SARS-CoV-2","ATACAAAAACCGTATG",2,13.03,9.38,-1.46,0.09,2.44,1,0.01,">1 nonsynonymous","T55N L57A P169H",3
"lib2","SARS-CoV-2","ATACAAAAATATAGCG",5,52.46,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","R27Y N40F D68P N109I Y123T",5
"lib2","SARS-CoV-2","ATACAAAACAGAGATG",6,66.61,10.79,-0.04,0.06,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAAAACATACTTA",2,14.98,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","D34N K87I Y93L S113M E154T",5
"lib2","SARS-CoV-2","ATACAAAAGAAAACTA",6,40.22,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y21K N120I A145M",3
"lib2","SARS-CoV-2","ATACAAAAGAGCGTTC",1,18.18,10.16,-0.68,0.06,2.99,1.01,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","ATACAAAATCTCTGTG",5,95.13,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37I W106C Y159Q",3
"lib2","SARS-CoV-2","ATACAAAATTGTTCAT",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D S43W Y66S T85M V103N S113H H189I",7
"lib2","SARS-CoV-2","ATACAAACAACAAGAT",4,29.98,7.21,-3.62,0.38,1.5,1.12,0.04,">1 nonsynonymous","L38I A105L P149L",3
"lib2","SARS-CoV-2","ATACAAACCAAAAGAC",8,51.11,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N24G G86V",2
"lib2","SARS-CoV-2","ATACAAACCCACAAGA",6,51.3,10.79,-0.05,0.04,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAAACCCCAAGAC",9,63.51,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2Y V37L F99T I104P Y143V Y159W",6
"lib2","SARS-CoV-2","ATACAAACGAGTTTGC",4,2.68,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib2","SARS-CoV-2","ATACAAACTACAATAC",2,57.17,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F44T L60V N107V G166V",4
"lib2","SARS-CoV-2","ATACAAACTATATATG",4,26.69,10.76,-0.08,0.08,2.72,1.24,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAAACTGCAAGTT",14,108.3,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6I S69A P133Q",3
"lib2","SARS-CoV-2","ATACAAACTGGACACT",1,26.35,10.75,-0.09,0.07,2.9,1.13,0,">1 nonsynonymous","N64S D97L P149S",3
"lib2","SARS-CoV-2","ATACAAAGAGTCCGAC",1,35.02,10.89,0.05,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAAAGATAATAAA",8,19.7,8.89,-1.94,0.26,1.5,1.07,0.04,">1 nonsynonymous","A33D F99Y",2
"lib2","SARS-CoV-2","ATACAAAGATCGTATC",4,87.47,8.15,-2.69,0.14,2.24,1.1,0.01,">1 nonsynonymous","L5D Y35I Q176V",3
"lib2","SARS-CoV-2","ATACAAAGCCCACTGT",2,8.64,10.72,-0.11,0.1,3,1.03,0,"1 nonsynonymous","T46L",1
"lib2","SARS-CoV-2","ATACAAAGCGATTCGA",1,26.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12S T46Y R127T T201P",4
"lib2","SARS-CoV-2","ATACAAAGCTACCCAC",4,16.43,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N1F C49V Y91M W106L",4
"lib2","SARS-CoV-2","ATACAAATAGCTTGAA",1,18.57,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","R16L I28L Y35T F70T Y165E",5
"lib2","SARS-CoV-2","ATACAAATGGCCATTA",18,243.15,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T3S L38W T46C T85L N120W",5
"lib2","SARS-CoV-2","ATACAAATGTAATAAG",2,10.2,8.58,-2.25,0.13,2.61,1,0.01,">1 nonsynonymous","F167L P197G",2
"lib2","SARS-CoV-2","ATACAAATGTACAGAA",4,3.04,NA,NA,NA,NA,NA,NA,"stop","G83* N118Y Y143R",3
"lib2","SARS-CoV-2","ATACAAATGTACGGTT",4,105.16,10.76,-0.07,0.04,2.96,1.05,0,">1 nonsynonymous","G9S S139N",2
"lib2","SARS-CoV-2","ATACAAATTAAAGGCG",7,3.14,NA,NA,NA,NA,NA,NA,"stop","S69* Y121F",2
"lib2","SARS-CoV-2","ATACAACAATGCCTTG",13,101.49,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V11G A105K Y121Q",3
"lib2","SARS-CoV-2","ATACAACACAGAAATT",11,52.97,6,-4.84,2,3,1.15,0,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","ATACAACACCAGTGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y L57M D90K W106M",4
"lib2","SARS-CoV-2","ATACAACAGAAAGATC",3,25.61,9.5,-1.34,0.11,2.76,1.19,0.01,"1 nonsynonymous","K114P",1
"lib2","SARS-CoV-2","ATACAACAGATAAAGT",3,15.24,6,-4.84,2,1.5,1.08,0.05,">1 nonsynonymous","R27V I72M A89N K114L",4
"lib2","SARS-CoV-2","ATACAACATGTAGGCA",2,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118E R179S S184K T201S",4
"lib2","SARS-CoV-2","ATACAACCATAATTGG",3,47.39,10.8,-0.04,0.04,2.99,1.04,0,"1 nonsynonymous","V115T",1
"lib2","SARS-CoV-2","ATACAACCATAGTAAG",1,23.77,7.01,-3.82,0.57,1.5,1.21,0.05,">1 nonsynonymous","L5G E76N K87R L131T",4
"lib2","SARS-CoV-2","ATACAACCCGATATCA",2,43.99,9.37,-1.47,0.1,2.11,1.06,0.01,">1 nonsynonymous","Q84Y Y121I",2
"lib2","SARS-CoV-2","ATACAACCTAACCATT",11,143.77,10.66,-0.18,0.03,2.86,1.12,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","ATACAACCTATTGGCT",1,36.24,10.86,0.02,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAACGCTATATAA",5,29.79,9.74,-1.09,0.16,2.66,1.08,0.01,">1 nonsynonymous","F62I N107R T201H",3
"lib2","SARS-CoV-2","ATACAACGTACTCCGC",12,79.68,10.16,-0.68,0.06,2.81,1.08,0,">1 nonsynonymous","V65L G152I",2
"lib2","SARS-CoV-2","ATACAACTACAAGTCA",8,60.36,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F44S P177R",2
"lib2","SARS-CoV-2","ATACAACTATGCTATG",1,9.58,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","D34R K94F S113V R136N",4
"lib2","SARS-CoV-2","ATACAACTCGATAATG",5,81.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4C G9R L38P N64W F134N E141I T170C",7
"lib2","SARS-CoV-2","ATACAACTGACAAAAC",2,59.8,8.8,-2.03,0.08,2.96,1.06,0,">1 nonsynonymous","G83S K87C T170K",3
"lib2","SARS-CoV-2","ATACAACTTCAACTAA",10,113.08,10.19,-0.65,0.02,2.91,1.06,0,">1 nonsynonymous","C6R Y35W",2
"lib2","SARS-CoV-2","ATACAACTTCGGTATG",4,33.61,10.16,-0.68,0.1,2.66,1.04,0,">1 nonsynonymous","D90N V173S",2
"lib2","SARS-CoV-2","ATACAAGATGCCTCCG",2,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22P D68T G83D W106F",4
"lib2","SARS-CoV-2","ATACAAGGACCTCTGT",14,129.5,10.82,-0.01,0.06,2.85,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAAGGCACGGCAA",9,74.28,8.94,-1.89,0.05,2.92,1.05,0,">1 nonsynonymous","F62M G117H",2
"lib2","SARS-CoV-2","ATACAAGGGCAGCACA",3,31.35,7.78,-3.06,0.2,1.59,1.05,0.01,">1 nonsynonymous","G9W A14V Y119N G152V Y178F",5
"lib2","SARS-CoV-2","ATACAAGGGGAATAAA",13,162.11,10.76,-0.07,0.03,2.98,1.04,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","ATACAAGGTCCTAAGA",1,20.7,6.67,-4.17,0.56,1.5,1.07,0.05,">1 nonsynonymous","P54K F70L W106S",3
"lib2","SARS-CoV-2","ATACAAGGTTTGCACA",2,37.72,10.12,-0.71,0.08,2.79,1.03,0,">1 nonsynonymous","N1H A14V",2
"lib2","SARS-CoV-2","ATACAAGTCGACAACA",1,4.92,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATACAATAATTCAATA",17,87.24,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","T3S R25Y N107E",3
"lib2","SARS-CoV-2","ATACAATACCTAATAC",1,0.14,NA,NA,NA,NA,NA,NA,"stop","F17* V37L S139G G172V T201*",5
"lib2","SARS-CoV-2","ATACAATAGAATCTGT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","C61* K87* K114D E141S",4
"lib2","SARS-CoV-2","ATACAATAGCAACTGA",6,75.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W23M G83F T170M",3
"lib2","SARS-CoV-2","ATACAATATAGAATGA",9,133.59,9.06,-1.77,0.07,2.03,1.11,0,">1 nonsynonymous","F62M A105W E154L",3
"lib2","SARS-CoV-2","ATACAATCAATACCCA",7,39.11,8.17,-2.66,0.43,1.5,1.08,0.08,">1 nonsynonymous","V77N P169G",2
"lib2","SARS-CoV-2","ATACAATCAATGATAC",11,112.21,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R16L N92W W106L E135P C158A",5
"lib2","SARS-CoV-2","ATACAATCCACACAAA",6,0.25,NA,NA,NA,NA,NA,NA,"stop","T55V Y119*",2
"lib2","SARS-CoV-2","ATACAATCCAGAATTA",6,52.72,10.01,-0.83,0.09,2.29,1.08,0,">1 nonsynonymous","R16L V52G P197Y",3
"lib2","SARS-CoV-2","ATACAATCTATAGGAT",7,2.93,NA,NA,NA,NA,NA,NA,"stop","P54T D98* F126I R136*",4
"lib2","SARS-CoV-2","ATACAATTCAAACCCT",3,2.31,NA,NA,NA,NA,NA,NA,"stop","A67F Y175*",2
"lib2","SARS-CoV-2","ATACAATTCACAAGAA",10,2.36,NA,NA,NA,NA,NA,NA,"stop","I72T F99R Q163* T201M",4
"lib2","SARS-CoV-2","ATACAATTCCCACAAC",8,87.61,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V20E S69M Y123K D137W",4
"lib2","SARS-CoV-2","ATACAATTGAGGAAAT",4,2.88,NA,NA,NA,NA,NA,NA,"stop","I72F I104R T201*",3
"lib2","SARS-CoV-2","ATACAATTGTATATAG",4,25.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35T Y50P G74D N107S C150F",5
"lib2","SARS-CoV-2","ATACACAAAAAGCGCT",5,46.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6N I28R V37K N120A S139L P161Y Y165I P177W",8
"lib2","SARS-CoV-2","ATACACAAAACCTAAA",2,20.69,10.85,0.01,0.09,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACAAAGTTTATA",7,45.59,8.03,-2.8,0.2,1.5,1.11,0.01,">1 nonsynonymous","A14S W23R V153A T201S",4
"lib2","SARS-CoV-2","ATACACAACCGCACCC",5,24.28,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F17P N40K G86E I142Q F185V T201M",6
"lib2","SARS-CoV-2","ATACACAACCTAGGGG",3,46.7,6,-4.84,2,2.47,1.17,0.01,">1 nonsynonymous","A22Q K87S Y175I",3
"lib2","SARS-CoV-2","ATACACAACGCTTACT",3,26.66,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4D K114N D137L V153M",4
"lib2","SARS-CoV-2","ATACACAACTATCCTG",1,22.26,8.96,-1.88,0.08,2.78,1.21,0,"1 nonsynonymous","N157A",1
"lib2","SARS-CoV-2","ATACACAAGACGATAA",1,11.34,10.85,0.02,0.08,2.91,1.07,0.01,">1 nonsynonymous","A33V A42R C61L L122A",4
"lib2","SARS-CoV-2","ATACACAATAATGCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","I88H N107R E141D P161V R179*",5
"lib2","SARS-CoV-2","ATACACAATTCACACA",5,155.63,9.62,-1.22,0.03,2.86,1.08,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","ATACACAATTCACCAA",1,13.89,10.93,0.09,0.06,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACACAAGAACTA",1,46.03,10.51,-0.33,0.04,2.93,1.02,0,">1 nonsynonymous","N30E T140L",2
"lib2","SARS-CoV-2","ATACACACAGAACTAA",3,71.63,10.82,-0.01,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACACAGAGGCTA",4,67.99,9.57,-1.27,0.08,1.83,1.09,0,">1 nonsynonymous","L5V A14L T85L",3
"lib2","SARS-CoV-2","ATACACACCACTAACA",4,24.12,9.05,-1.79,0.11,2.87,1.17,0.01,">1 nonsynonymous","T100S N157G",2
"lib2","SARS-CoV-2","ATACACACTATAGAGG",1,6.38,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","A14T V37I T46D K87C V182T",5
"lib2","SARS-CoV-2","ATACACAGCTCCACCT",4,64.67,9.04,-1.79,0.1,2.63,1.1,0,">1 nonsynonymous","K94N L122K Y143N P197A",4
"lib2","SARS-CoV-2","ATACACAGTCTAACCA",1,24.14,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S36L F62M Y119V P177Y",4
"lib2","SARS-CoV-2","ATACACATAAGAAGAT",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P V103K",2
"lib2","SARS-CoV-2","ATACACATAGATTAAT",11,12.59,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T3H I80G D97L N130E P191Y",5
"lib2","SARS-CoV-2","ATACACATAGTATGCA",1,24.22,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T55Y L131S S139T G166L",4
"lib2","SARS-CoV-2","ATACACATATGTTAAA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","L5R E76T A89L I138S Q168* L187Q P197E",7
"lib2","SARS-CoV-2","ATACACATGAATCCAA",9,38.93,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A14D L57E G86S G116E",4
"lib2","SARS-CoV-2","ATACACATGGGAAAAG",4,10.26,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","N64Q I72T D90H D98M E141T G152D F156L F167D",8
"lib2","SARS-CoV-2","ATACACATTCAAAAGA",2,72.25,9.13,-1.7,0.13,2.63,1.07,0.01,">1 nonsynonymous","P54G T63Y K87E",3
"lib2","SARS-CoV-2","ATACACATTTCAACTT",4,24.99,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N1F Y35T S53I P82H N92W",5
"lib2","SARS-CoV-2","ATACACCACACAAATG",7,16.34,6.58,-4.25,0.45,1.5,1.01,0.02,">1 nonsynonymous","T3K F99Q E154M",3
"lib2","SARS-CoV-2","ATACACCACCATCTAA",10,3.35,NA,NA,NA,NA,NA,NA,"stop","N13W A33M T46L G116* S139R Y178Q",6
"lib2","SARS-CoV-2","ATACACCACGGACCCT",3,77.63,8.81,-2.03,0.14,1.65,1.11,0.01,">1 nonsynonymous","K56Q G86E",2
"lib2","SARS-CoV-2","ATACACCATACAAATA",6,3.48,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib2","SARS-CoV-2","ATACACCATATGATCC",8,150.07,10.9,0.06,0.05,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACCCAGGTGGTA",2,16.73,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C61D G74T G152V",3
"lib2","SARS-CoV-2","ATACACCCGATAGACA",4,135.61,10.82,-0.01,0.04,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACCTAGCGGACT",6,0.69,NA,NA,NA,NA,NA,NA,"stop","T3I A81* T85F",3
"lib2","SARS-CoV-2","ATACACCTAGTCAGAA",6,88.72,8.51,-2.33,0.11,2.04,1.08,0,"1 nonsynonymous","Y165C",1
"lib2","SARS-CoV-2","ATACACCTCAAGATGG",2,10.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55I R136M P149W",3
"lib2","SARS-CoV-2","ATACACCTTTGTACTG",1,64.14,8.41,-2.43,0.11,2.75,1.03,0.01,">1 nonsynonymous","C61G Y175S",2
"lib2","SARS-CoV-2","ATACACGAAAACCGGG",2,3.61,NA,NA,NA,NA,NA,NA,"stop","C61D Y175*",2
"lib2","SARS-CoV-2","ATACACGACCAACATA",9,24.26,9.86,-0.97,0.4,1.5,1.07,0.07,">1 nonsynonymous","C49I R73L K132H",3
"lib2","SARS-CoV-2","ATACACGAGACACTAA",7,1.32,NA,NA,NA,NA,NA,NA,"stop","F44H Y91* F99*",3
"lib2","SARS-CoV-2","ATACACGATAAGGAGA",4,24.48,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A105R I138N",2
"lib2","SARS-CoV-2","ATACACGCACGTTATC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","D34H K56G I80* T85E V103T Y119P Q144P",7
"lib2","SARS-CoV-2","ATACACGCGGGTCCCC",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R N58D P82K P149N",4
"lib2","SARS-CoV-2","ATACACGGGCCTAATT",3,32.04,6,-4.84,0.94,1.5,1.1,0,">1 nonsynonymous","S41G G86V A105I N151G",4
"lib2","SARS-CoV-2","ATACACGGTATCAATT",6,19.07,9.25,-1.58,0.1,2.2,1,0,">1 nonsynonymous","C6Y P96S K198H",3
"lib2","SARS-CoV-2","ATACACGTAAAGTCAA",5,9.57,NA,NA,NA,NA,NA,NA,"stop","N4Y G9L A22S Q168*",4
"lib2","SARS-CoV-2","ATACACGTTTCTGTTT",26,463.39,10.89,0.05,0.05,2.91,1.1,0,">1 nonsynonymous","T55D V173R",2
"lib2","SARS-CoV-2","ATACACTAAAAAGAAA",1,13.85,10.76,-0.08,0.04,3,1,0,">1 nonsynonymous","G83N K198Q",2
"lib2","SARS-CoV-2","ATACACTAATGAAAAC",2,13.47,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G86F D98E Q176R",3
"lib2","SARS-CoV-2","ATACACTAGGTTATCT",3,81.68,10.96,0.12,0.06,2.91,1.1,0,">1 nonsynonymous","S53E T85K",2
"lib2","SARS-CoV-2","ATACACTAGTTTGAAA",5,63.16,10.71,-0.13,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACACTCATACACCG",7,72.66,6,-4.84,0.68,1.53,1.1,0,">1 nonsynonymous","A22K G83A Q168P K199T",4
"lib2","SARS-CoV-2","ATACACTCGAAACGCA",6,65.96,8.01,-2.82,0.24,1.5,1.09,0.02,">1 nonsynonymous","I28E T170H",2
"lib2","SARS-CoV-2","ATACACTCGCCACTTG",4,60.04,10.68,-0.15,0.05,2.92,1.07,0,">1 nonsynonymous","N64R K128G",2
"lib2","SARS-CoV-2","ATACACTGATTGAACT",5,7.55,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T55N R73V P82Y A145L",4
"lib2","SARS-CoV-2","ATACACTGGTAACCTT",2,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R S19E P54L D90I L122V Y143R Y178S",7
"lib2","SARS-CoV-2","ATACACTGTATTCCTA",18,60.02,6,-4.84,2,3,1.24,0,">1 nonsynonymous","A14R P82R N107H E135K Q168T",5
"lib2","SARS-CoV-2","ATACACTGTGAAAATG",11,165.2,10.83,-0.01,0.03,2.89,1.1,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","ATACAGAAACATACCG",4,67.25,9.83,-1.01,0.03,2.83,1.07,0,">1 nonsynonymous","N120C P149C",2
"lib2","SARS-CoV-2","ATACAGAAACCCAGTA",34,400.71,10.77,-0.07,0.03,2.95,1.07,0,">1 nonsynonymous","T3R F62M",2
"lib2","SARS-CoV-2","ATACAGAACAAACAAC",5,2.42,NA,NA,NA,NA,NA,NA,"stop","I28G T55* F99V K114P Y178M",5
"lib2","SARS-CoV-2","ATACAGAACGAATATA",12,5.02,NA,NA,NA,NA,NA,NA,"stop","Y50T Y93K S129L P149* V173L",5
"lib2","SARS-CoV-2","ATACAGAATAAATTGA",4,31.74,9.34,-1.5,0.17,1.86,1.15,0.01,">1 nonsynonymous","C6R N120I",2
"lib2","SARS-CoV-2","ATACAGACAGTGAACA",12,245.65,10.04,-0.8,0.05,2.58,1.06,0,">1 nonsynonymous","I104H V115L",2
"lib2","SARS-CoV-2","ATACAGACGGCCTGAG",4,41.76,10.85,0.01,0.07,2.93,1.1,0,"1 nonsynonymous","I72V",1
"lib2","SARS-CoV-2","ATACAGACGTCAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N58R T148*",2
"lib2","SARS-CoV-2","ATACAGACTATAAGAA",1,2.19,NA,NA,NA,NA,NA,NA,"stop","L60* I104L",2
"lib2","SARS-CoV-2","ATACAGAGGACGGTCT",9,39.83,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9T I72K K87V Y121H",4
"lib2","SARS-CoV-2","ATACAGAGTAAAAACA",5,76.46,10.89,0.05,0.03,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","ATACAGAGTGGATCTA",3,55.91,10.75,-0.09,0.04,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGATACAAAGCA",14,87.77,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49R T55Y G152L",3
"lib2","SARS-CoV-2","ATACAGATAGGCTTAA",11,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T Y39R G86R G116T",4
"lib2","SARS-CoV-2","ATACAGATATTTACAG",2,22.22,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S19L Y175V A192T",3
"lib2","SARS-CoV-2","ATACAGATGATCTTAT",2,14.66,10.42,-0.41,0.12,2.8,1,0,">1 nonsynonymous","L57M D97F",2
"lib2","SARS-CoV-2","ATACAGATTCACTTAT",2,115.38,10.49,-0.34,0.03,2.94,1.05,0,"1 nonsynonymous","Y66D",1
"lib2","SARS-CoV-2","ATACAGATTGCGTAAA",4,131.52,10.82,-0.02,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGATTTTTCCTA",5,74.91,10.88,0.05,0.07,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATACAGCAATACCCAA",1,10.27,10.74,-0.09,0.1,3,1.03,0,">1 nonsynonymous","N40K A192T",2
"lib2","SARS-CoV-2","ATACAGCATAAAAGTG",17,247.5,6.85,-3.98,0.18,1.5,1.11,0.01,">1 nonsynonymous","A14M Y175L",2
"lib2","SARS-CoV-2","ATACAGCATAATTACT",2,50.69,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","G9S Y91D D112T",3
"lib2","SARS-CoV-2","ATACAGCATATCTATT",1,56.8,10.66,-0.18,0.06,2.92,1.08,0,">1 nonsynonymous","S41L S200F",2
"lib2","SARS-CoV-2","ATACAGCATCAAAGTG",1,58.45,8.58,-2.26,0.06,2.89,1.06,0,">1 nonsynonymous","F44T N157S",2
"lib2","SARS-CoV-2","ATACAGCATCGATGGT",3,77.24,10.71,-0.12,0.03,2.94,1.04,0,"1 nonsynonymous","N120F",1
"lib2","SARS-CoV-2","ATACAGCCAATATGGC",4,2.06,NA,NA,NA,NA,NA,NA,"stop","S19* T85N",2
"lib2","SARS-CoV-2","ATACAGCCTCCTTTGA",4,35.73,8.8,-2.03,0.17,1.68,1.12,0.01,">1 nonsynonymous","W23P G155N",2
"lib2","SARS-CoV-2","ATACAGCCTGTAAGTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","W23* V37G V153*",3
"lib2","SARS-CoV-2","ATACAGCCTTTGGCCT",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A D34L L57Y A67S S200C",5
"lib2","SARS-CoV-2","ATACAGCTCGTGGCCC",5,0.15,NA,NA,NA,NA,NA,NA,"stop","N92F D112* V115A",3
"lib2","SARS-CoV-2","ATACAGCTGGAATACG",7,138.82,10.46,-0.38,0.05,2.93,1.06,0,">1 nonsynonymous","N40S F47L",2
"lib2","SARS-CoV-2","ATACAGGATTTCAAAA",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L C61I",2
"lib2","SARS-CoV-2","ATACAGGCCTGTCTGG",6,108.78,8.54,-2.3,0.06,2.75,1.08,0,">1 nonsynonymous","T85S Y143N",2
"lib2","SARS-CoV-2","ATACAGGGATACGTCT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","G9Q R16C G146* V173K",4
"lib2","SARS-CoV-2","ATACAGGGCGGCCTTA",6,93.69,10.84,0.01,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGGGGAAACGTC",8,89.54,6,-4.84,1.26,1.5,1.2,0.02,">1 nonsynonymous","G9N D59S Y91L S129V G146I L188M",6
"lib2","SARS-CoV-2","ATACAGGGGAACTAAA",5,44.56,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F17N D90R T100L",3
"lib2","SARS-CoV-2","ATACAGGGGGCAGCTT",1,7.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S19T R127L",2
"lib2","SARS-CoV-2","ATACAGTAAAGGATAT",22,205.92,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G51F P149R P161L",3
"lib2","SARS-CoV-2","ATACAGTACATGCCTT",2,1.14,NA,NA,NA,NA,NA,NA,"stop","A81P P96D G117F P149H T201*",5
"lib2","SARS-CoV-2","ATACAGTACCTAGCCG",15,3.1,NA,NA,NA,NA,NA,NA,"stop","V37S S113V L131F Y143T Y175*",5
"lib2","SARS-CoV-2","ATACAGTATAGGATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N40*",1
"lib2","SARS-CoV-2","ATACAGTCCGCTGCAA",7,108.65,10,-0.84,0.04,2.9,1,0,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","ATACAGTCTTCGAGAC",3,84.81,10.87,0.03,0.05,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGTGAACTGTTC",7,97.6,10.83,-0.01,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGTGGACATAGC",3,66.54,10.68,-0.16,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACAGTGGACGAGTT",3,30.44,9.97,-0.87,0.07,2.08,1.05,0.01,">1 nonsynonymous","T15M T46M D97W",3
"lib2","SARS-CoV-2","ATACAGTGTTTTGTCC",4,49.15,10.48,-0.35,0.04,2.82,1.19,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","ATACAGTTATATCTTG",1,59.65,10.37,-0.46,0.06,2.86,1.1,0,">1 nonsynonymous","F126L P149H",2
"lib2","SARS-CoV-2","ATACATAAAAACTTGA",4,88.37,9.92,-0.91,0.07,2.82,1.12,0,">1 nonsynonymous","K128G G174F L188R",3
"lib2","SARS-CoV-2","ATACATAAAGAATGAA",12,50.77,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","E76M K87C W106C R136S",4
"lib2","SARS-CoV-2","ATACATAAATAGATGA",2,30.99,6.36,-4.48,0.63,1.5,1.22,0.02,">1 nonsynonymous","K26M V77M Q84W E154R N171H",5
"lib2","SARS-CoV-2","ATACATAACACATTTA",5,84.41,10.08,-0.75,0.03,2.89,1.08,0,">1 nonsynonymous","T63S Q144Y",2
"lib2","SARS-CoV-2","ATACATAACTAAATGT",2,21.76,9.62,-1.21,0.23,1.58,1.05,0.02,">1 nonsynonymous","Y35W K56A A105P",3
"lib2","SARS-CoV-2","ATACATAAGACCCCTA",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109L Y143E P149D",3
"lib2","SARS-CoV-2","ATACATAAGCTGATGG",19,433.5,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T3A K48E C150M S200V",4
"lib2","SARS-CoV-2","ATACATACAAATCTTT",1,21.55,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","K128V F167K K198M",3
"lib2","SARS-CoV-2","ATACATACGTTTCACT",6,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I R136P",2
"lib2","SARS-CoV-2","ATACATACTACCCGGG",1,52.93,8.56,-2.28,0.11,2.88,1.01,0.01,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","ATACATAGAAATCAAG",5,16.45,8.44,-2.4,0.23,1.5,1,0.03,">1 nonsynonymous","D34G S45K P149N F160C",4
"lib2","SARS-CoV-2","ATACATAGAACAATTA",5,23.63,6.03,-4.81,0.86,1.5,1.12,0.02,">1 nonsynonymous","F62M D68M V77L S129M S147A Q163C",6
"lib2","SARS-CoV-2","ATACATAGATGCAGAA",1,7.51,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","D34R Y121G",2
"lib2","SARS-CoV-2","ATACATAGATTGAATC",2,96.67,10.7,-0.13,0.05,2.96,1.05,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","ATACATAGGCATGACT",5,5.77,NA,NA,NA,NA,NA,NA,"stop","V65L A105*",2
"lib2","SARS-CoV-2","ATACATATGAATGAAA",2,8.88,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I2M G9C A33R C49K D68A",5
"lib2","SARS-CoV-2","ATACATATTATAGTGT",3,58.94,10.62,-0.22,0.06,2.94,1.05,0,"1 nonsynonymous","S184F",1
"lib2","SARS-CoV-2","ATACATATTATCAAAA",7,68.23,9.32,-1.52,0.05,2.07,1,0,">1 nonsynonymous","C6V F12R T55D",3
"lib2","SARS-CoV-2","ATACATATTCAACGAT",4,45.12,8.76,-2.08,0.09,1.97,1.13,0,">1 nonsynonymous","R136A P169M",2
"lib2","SARS-CoV-2","ATACATATTGCCCCCA",2,24.87,10.34,-0.49,0.1,2.1,1.02,0.01,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","ATACATATTTACCACA",3,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S T46H G83T",3
"lib2","SARS-CoV-2","ATACATATTTCCAACC",4,92.1,10.73,-0.11,0.04,2.95,1.04,0,"1 nonsynonymous","A145G",1
"lib2","SARS-CoV-2","ATACATCAAGCGAATA",5,35.14,10.79,-0.04,0.07,2.85,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACATCACCAACGTA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K F99Y",2
"lib2","SARS-CoV-2","ATACATCAGGATCGAT",8,74.68,6,-4.84,2,3,1.17,0,">1 nonsynonymous","W23L F47S Y119M G146P",4
"lib2","SARS-CoV-2","ATACATCCCAAACGGT",10,2.24,NA,NA,NA,NA,NA,NA,"stop","S69K Y119* I142R",3
"lib2","SARS-CoV-2","ATACATCCCCTATAAA",8,83.46,10.76,-0.08,0.03,2.98,1.05,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","ATACATCCGTTTACAA",2,27.19,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","S41T G83F V103I Y143H Y165R V181A",6
"lib2","SARS-CoV-2","ATACATCCTACTTAGT",21,111.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50T L95T",2
"lib2","SARS-CoV-2","ATACATCGAATAAGTC",6,43.73,10.76,-0.07,0.09,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACATCTGACTAATA",10,2.04,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib2","SARS-CoV-2","ATACATCTTAACTCTA",10,152.09,10.96,0.13,0.05,2.89,1.11,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","ATACATCTTCCTTATG",6,38.35,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A89D F99R Y119D G155S T201L",5
"lib2","SARS-CoV-2","ATACATGACATTTTAG",2,51.37,9.91,-0.93,0.07,2.75,1.06,0,">1 nonsynonymous","C31K P149H",2
"lib2","SARS-CoV-2","ATACATGACCCTGAAG",2,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N D68A",2
"lib2","SARS-CoV-2","ATACATGAGGGTCCGC",8,87.86,9.59,-1.24,0.09,2.14,1.07,0,">1 nonsynonymous","V11N A18G",2
"lib2","SARS-CoV-2","ATACATGCAGCAAGAC",3,12.93,9.75,-1.09,0.05,3,1.02,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","ATACATGCATGCACTG",5,36.77,8.89,-1.95,0.06,2.84,1.01,0,">1 nonsynonymous","K56L F156K V173S",3
"lib2","SARS-CoV-2","ATACATGCATTAAGCA",3,64.23,10.61,-0.23,0.05,2.94,1,0,">1 nonsynonymous","N1V L5Q V32L T55F",4
"lib2","SARS-CoV-2","ATACATGCGATAAAGG",5,56.16,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I88N R179Y",2
"lib2","SARS-CoV-2","ATACATGGGAAGCTAA",4,1.19,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","ATACATGTTAAACTAA",2,19.42,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y93L W106T D112C Y143L T201V",5
"lib2","SARS-CoV-2","ATACATTACAGCTCGA",3,43.59,10.22,-0.62,0.05,2.91,1.04,0,">1 nonsynonymous","K56D T63F S164Y",3
"lib2","SARS-CoV-2","ATACATTACCTGACTA",4,17.04,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","W23V D137W",2
"lib2","SARS-CoV-2","ATACATTAGACAGAGT",1,28.63,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","V37T F44L Y50H L162Q",4
"lib2","SARS-CoV-2","ATACATTAGTTGATGG",5,1.05,NA,NA,NA,NA,NA,NA,"stop","S41* S139I A145C Y159H G174D",5
"lib2","SARS-CoV-2","ATACATTATATTATGA",7,62.73,10.84,0.01,0.08,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACATTATGTTAACG",10,163.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73T Y178K",2
"lib2","SARS-CoV-2","ATACATTCACTCAAAA",1,33.85,10.16,-0.67,0.12,2.62,1.03,0.01,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","ATACATTCCATCCTAA",6,94.74,9.04,-1.8,0.05,2.93,1.06,0,">1 nonsynonymous","C61N E141Q G174V",3
"lib2","SARS-CoV-2","ATACATTCCATTCCTA",1,37.09,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","Y50D V77Y Q84M L95C P149F G155W",6
"lib2","SARS-CoV-2","ATACATTCTCATTCTA",1,13.48,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N24P D75A A105I Q168R",4
"lib2","SARS-CoV-2","ATACATTGAAAACAAA",3,111.72,10.86,0.03,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACATTGAGTTTACC",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L R179F S200W",3
"lib2","SARS-CoV-2","ATACATTTAAGAATAC",3,1.4,NA,NA,NA,NA,NA,NA,"stop","N40* S139G N171S",3
"lib2","SARS-CoV-2","ATACATTTCTAACAAT",3,67.5,10.89,0.05,0.09,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCAAAATCACAAA",3,45.04,10.77,-0.07,0.09,2.77,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCAAAGGTACATA",5,37.96,10.74,-0.1,0.05,2.9,1.12,0,">1 nonsynonymous","I2N G9R",2
"lib2","SARS-CoV-2","ATACCAAAGTCGATCC",11,94.62,9.51,-1.32,0.08,1.77,1.09,0,"1 nonsynonymous","Y50Q",1
"lib2","SARS-CoV-2","ATACCAAATAAAAAAT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S C61R F99S",3
"lib2","SARS-CoV-2","ATACCAAATATATGGT",8,66.93,8.98,-1.85,0.1,1.95,1.04,0,">1 nonsynonymous","L5H N107V P191T",3
"lib2","SARS-CoV-2","ATACCAAATCAGAAAT",10,155.51,10.8,-0.04,0.03,2.93,1.09,0,">1 nonsynonymous","T100F S139E",2
"lib2","SARS-CoV-2","ATACCAAATCGAACAT",8,72.77,7.72,-3.12,0.34,1.5,1.03,0.04,">1 nonsynonymous","A89K K128I A190V",3
"lib2","SARS-CoV-2","ATACCAAATGAAAGTC",2,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N K56W R136K G155E",4
"lib2","SARS-CoV-2","ATACCAAATGGGCATA",10,53.98,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G86D T100D N107H R127C Q144V",5
"lib2","SARS-CoV-2","ATACCAAATTGTTCAC",1,64.42,10.47,-0.36,0.05,2.95,1.02,0,">1 nonsynonymous","T15I T201M",2
"lib2","SARS-CoV-2","ATACCAACACGACTGA",1,55.41,10.82,-0.01,0.05,2.93,1.06,0,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","ATACCAACATATCTAG",8,61.55,10.62,-0.21,0.03,2.96,1.05,0,">1 nonsynonymous","K132T C195V",2
"lib2","SARS-CoV-2","ATACCAACATCTAAAT",1,16.17,6.56,-4.28,0.42,2.19,1.16,0.01,">1 nonsynonymous","D97Y S113P",2
"lib2","SARS-CoV-2","ATACCAACCAATAAAG",9,226.13,10.81,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCAACCACTATCA",1,37.7,9.5,-1.33,0.1,2.42,1.04,0,">1 nonsynonymous","Q176K T201W",2
"lib2","SARS-CoV-2","ATACCAACGCTTCGTA",4,46.95,10.56,-0.28,0.09,2.87,1.14,0,">1 nonsynonymous","E141G S184N",2
"lib2","SARS-CoV-2","ATACCAACTCGCATGT",9,36.82,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D97Y V103N",2
"lib2","SARS-CoV-2","ATACCAAGATCAATAT",4,54.62,10.09,-0.75,0.05,2.71,1,0,">1 nonsynonymous","S36M V52F D98L",3
"lib2","SARS-CoV-2","ATACCAAGGACGACTA",5,54.42,6.19,-4.65,0.5,1.5,1.07,0.01,">1 nonsynonymous","R16V P82V L125E P169M",4
"lib2","SARS-CoV-2","ATACCAAGGAGCTATG",10,167.45,9.45,-1.38,0.07,2.53,1.06,0,">1 nonsynonymous","N40A Y50F Y123T G166N",4
"lib2","SARS-CoV-2","ATACCAAGTAGACCTA",4,23.32,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","P82M I88R G146P",3
"lib2","SARS-CoV-2","ATACCAAGTTCGTCCG",1,24.57,10.36,-0.48,0.06,2.82,1.03,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","ATACCAAGTTGCTGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","N13S L95P Y175* K198V",4
"lib2","SARS-CoV-2","ATACCAATACACATTT",3,76.69,8.87,-1.97,0.04,2.81,1.05,0,">1 nonsynonymous","Y35P L57T T170G",3
"lib2","SARS-CoV-2","ATACCAATAGTTCATA",6,0.07,NA,NA,NA,NA,NA,NA,"stop","F99* S113A I138E V153G P161L Q168R",6
"lib2","SARS-CoV-2","ATACCAATATGACATG",4,91.91,10.86,0.02,0.05,2.96,1.06,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","ATACCAATTGAAAGTG",10,158.83,10.9,0.07,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCAATTTACCAAG",2,9.75,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L95G W106L P133I A192V",4
"lib2","SARS-CoV-2","ATACCACAACTAAATA",3,46.39,9.62,-1.22,0.07,2.9,1.15,0,">1 nonsynonymous","Y39K C61A T170Y",3
"lib2","SARS-CoV-2","ATACCACATGACTCGG",14,237.73,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56N A105E G116R P177F",4
"lib2","SARS-CoV-2","ATACCACGCCAGTCCG",2,25.67,8.37,-2.47,0.2,1.5,1.02,0.03,">1 nonsynonymous","N40Y A67F N107S",3
"lib2","SARS-CoV-2","ATACCACTAAATATAT",15,48.76,6,-4.84,1.34,1.5,1.13,0.01,">1 nonsynonymous","D34S L95R L122S I142R",4
"lib2","SARS-CoV-2","ATACCAGAAATCGCTA",5,27.06,8.62,-2.22,0.23,1.59,1.04,0.01,"1 nonsynonymous","D137G",1
"lib2","SARS-CoV-2","ATACCAGAGTCAATTA",2,29.63,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V11A F44R F99S A105L",4
"lib2","SARS-CoV-2","ATACCAGCATTTGTTC",1,20.96,10.5,-0.33,0.07,2.92,1.07,0,">1 nonsynonymous","L5N S41G",2
"lib2","SARS-CoV-2","ATACCAGCCTTACGCG",7,146.53,10.07,-0.77,0.05,2.93,1.06,0,"1 nonsynonymous","T170K",1
"lib2","SARS-CoV-2","ATACCAGGAAGCCATG",3,88.15,10.05,-0.79,0.04,2.89,1.04,0,"1 nonsynonymous","G155F",1
"lib2","SARS-CoV-2","ATACCAGGAGTTACAA",11,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29D K87E G101Y W106G S139G",5
"lib2","SARS-CoV-2","ATACCAGGATAAGATT",3,34.6,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y121Q G146M G174V",3
"lib2","SARS-CoV-2","ATACCAGGCATTTCTC",3,13.96,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","L38F I88K G172S",3
"lib2","SARS-CoV-2","ATACCAGGCGGCACTG",2,17,10.07,-0.76,0.08,2.87,1,0,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","ATACCAGGGCCGGTGA",12,64.87,7.52,-3.31,0.22,1.5,1.08,0.02,"1 nonsynonymous","R124A",1
"lib2","SARS-CoV-2","ATACCAGGTAAGTATT",7,109.95,10.79,-0.04,0.08,2.96,1.07,0,">1 nonsynonymous","V37M A192T",2
"lib2","SARS-CoV-2","ATACCAGTACCAATCC",10,169.09,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G83R N92H N120H S139D Y159T L183Y",6
"lib2","SARS-CoV-2","ATACCAGTCGACTTAA",3,9.81,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","R16S Y93N N130T P149K",4
"lib2","SARS-CoV-2","ATACCAGTGAACTTGG",10,86.06,8.04,-2.79,0.29,1.5,1,0.03,">1 nonsynonymous","S45L I88L T148V",3
"lib2","SARS-CoV-2","ATACCAGTTGAAATGT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","L5D I80M T140*",3
"lib2","SARS-CoV-2","ATACCATACACTTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib2","SARS-CoV-2","ATACCATATGGTTGAA",10,64.43,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y21H Y93S S147Y G174Q",4
"lib2","SARS-CoV-2","ATACCATCATCCACCT",4,102.51,10.84,0.01,0.06,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","ATACCATCCCTAAACG",5,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","ATACCATCCGACTGTA",1,48.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","E10V L38R Y66T Y91N D137P",5
"lib2","SARS-CoV-2","ATACCATCTATAACCC",1,67.95,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G166W Q176R",2
"lib2","SARS-CoV-2","ATACCATTATACCTCA",4,10.13,9.45,-1.38,0.18,2.34,1.12,0.01,"1 nonsynonymous","L162Y",1
"lib2","SARS-CoV-2","ATACCATTCACCATAA",11,106.15,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5E V37I A89I Y165K",4
"lib2","SARS-CoV-2","ATACCATTCGAAACAA",4,60.95,9.49,-1.35,0.09,2.32,1.11,0,">1 nonsynonymous","C31L V153C",2
"lib2","SARS-CoV-2","ATACCCAAAACTCCTT",3,0.45,NA,NA,NA,NA,NA,NA,"stop","E10* W106V Y143R",3
"lib2","SARS-CoV-2","ATACCCAACATACTTA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S E135L T170Y P191V",4
"lib2","SARS-CoV-2","ATACCCAAGAGTTTCC",8,179.53,10.17,-0.67,0.05,2.94,1.05,0,">1 nonsynonymous","E10D F47I T170S",3
"lib2","SARS-CoV-2","ATACCCAATCTAATAA",5,121.43,10.8,-0.04,0.03,2.97,1.04,0,">1 nonsynonymous","I2F T55I",2
"lib2","SARS-CoV-2","ATACCCACACTCGTAA",5,88.16,10.85,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCCACTGGTACGC",1,8.88,10.22,-0.62,0.18,2.65,1,0.02,">1 nonsynonymous","G51L L188Q",2
"lib2","SARS-CoV-2","ATACCCAGTTAATGCC",2,28.38,9.14,-1.7,0.18,2.16,1.04,0.01,">1 nonsynonymous","S41E P149T P161E",3
"lib2","SARS-CoV-2","ATACCCATACCCTATG",1,60.6,9.72,-1.12,0.11,1.97,1.12,0,">1 nonsynonymous","N40C C61A A81S",3
"lib2","SARS-CoV-2","ATACCCATGAAAGGAA",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N D90C F99S V115W Y143L C158N",6
"lib2","SARS-CoV-2","ATACCCATTTCCAAAT",2,23.7,8.05,-2.78,0.29,1.5,1.03,0.03,">1 nonsynonymous","Y35S G166P",2
"lib2","SARS-CoV-2","ATACCCATTTGGATCT",1,33.81,9.32,-1.52,0.18,1.87,1.02,0.02,">1 nonsynonymous","T85P S139L",2
"lib2","SARS-CoV-2","ATACCCCAGATTCCGC",2,14.88,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A14V Q79R Y123A P177S",4
"lib2","SARS-CoV-2","ATACCCCAGGACGGTG",1,46.4,8.6,-2.24,0.12,1.76,1.1,0.01,">1 nonsynonymous","A42V Y165A",2
"lib2","SARS-CoV-2","ATACCCCATGACCACT",3,34.98,6,-4.84,1.34,3,1.09,0,">1 nonsynonymous","C6F S69L V103N",3
"lib2","SARS-CoV-2","ATACCCCATTAATACT",1,0.94,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATACCCCCTAAACGCT",4,102.44,10.25,-0.59,0.06,2.9,1.09,0,">1 nonsynonymous","I2M T85M F160L",3
"lib2","SARS-CoV-2","ATACCCCGAAATAGAT",12,170.14,10.15,-0.69,0.06,2.73,1.04,0,">1 nonsynonymous","N40P Y50F N130D",3
"lib2","SARS-CoV-2","ATACCCCGGTCTACTT",4,14.96,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N13S S19Q R27A T55L N64H Y178N",6
"lib2","SARS-CoV-2","ATACCCCTAAAGGATA",2,34.5,9.47,-1.37,0.06,2.91,1.09,0,">1 nonsynonymous","P54I S113T V153G",3
"lib2","SARS-CoV-2","ATACCCCTCCTATATG",8,102.8,10.32,-0.52,0.02,2.96,1.02,0,">1 nonsynonymous","Y35P S41V T63A",3
"lib2","SARS-CoV-2","ATACCCCTCCTGAGAC",5,57.17,10.75,-0.08,0.04,2.96,1.03,0,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","ATACCCGAAATTTGGA",11,34.45,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T100G R127Y P149W",3
"lib2","SARS-CoV-2","ATACCCGAATACTGGG",5,38.33,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R73K S139A P169E R179K",4
"lib2","SARS-CoV-2","ATACCCGACTGAGGCG",9,21.91,6.94,-3.89,0.55,1.5,1.1,0.06,">1 nonsynonymous","L5S L95R V173W",3
"lib2","SARS-CoV-2","ATACCCGCAGCCTTGT",1,16.88,10.74,-0.1,0.08,2.86,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCCGCGAGGTAAA",5,70.1,10.66,-0.18,0.03,2.98,1.03,0,">1 nonsynonymous","T63I L122Y",2
"lib2","SARS-CoV-2","ATACCCGCTCGTATAT",2,100.51,9.02,-1.81,0.09,2.58,1.03,0,">1 nonsynonymous","Y66E S164V G174D",3
"lib2","SARS-CoV-2","ATACCCGGAGTACCGG",9,113.75,9.34,-1.5,0.1,1.69,1.08,0,">1 nonsynonymous","N107S E135V",2
"lib2","SARS-CoV-2","ATACCCGTATGCACGA",3,14.66,6,-4.84,1.91,1.5,1.15,0.04,">1 nonsynonymous","A105M L131A",2
"lib2","SARS-CoV-2","ATACCCGTCGGCTTAG",8,125.1,10.18,-0.66,0.04,2.72,1.02,0,">1 nonsynonymous","V52Q T140K",2
"lib2","SARS-CoV-2","ATACCCGTTGTCAAAA",12,249.95,10.1,-0.74,0.05,2.76,1.03,0,">1 nonsynonymous","N58L N120L",2
"lib2","SARS-CoV-2","ATACCCTAAACCTGCG",6,110.08,9.08,-1.75,0.05,2.9,1.06,0,">1 nonsynonymous","S41M G117V",2
"lib2","SARS-CoV-2","ATACCCTACAATACCT",4,97.05,10.02,-0.82,0.07,2.78,1.05,0,">1 nonsynonymous","C6L K128S",2
"lib2","SARS-CoV-2","ATACCCTATTGAACAT",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T F160S",2
"lib2","SARS-CoV-2","ATACCCTGAATACTCA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","K56P T100A V153*",3
"lib2","SARS-CoV-2","ATACCCTTAATCTTTG",5,43.14,6,-4.84,1.07,1.5,1.09,0.01,">1 nonsynonymous","Y35D D68M K87Q N107D P149R",5
"lib2","SARS-CoV-2","ATACCCTTATCATTAT",4,31.14,10.16,-0.68,0.33,1.83,1.1,0.05,">1 nonsynonymous","T3F S45F G101D Y121N G172N",5
"lib2","SARS-CoV-2","ATACCCTTTACAATAG",15,11.05,NA,NA,NA,NA,NA,NA,"stop","F12* L60C",2
"lib2","SARS-CoV-2","ATACCGAAAACCTAAA",7,33.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22V S53W T63L Y119N Q144Y",5
"lib2","SARS-CoV-2","ATACCGAAAATACTAG",5,3.62,NA,NA,NA,NA,NA,NA,"stop","C61M E141K P177*",3
"lib2","SARS-CoV-2","ATACCGAAAATAGGCT",2,33.06,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","I28W D75F G83I F167N",4
"lib2","SARS-CoV-2","ATACCGAAGAACCACA",7,69.46,10.93,0.1,0.07,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACCGACCAGCACTA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18C Q144F",2
"lib2","SARS-CoV-2","ATACCGAGTTGAACCT",10,20.56,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V37T D68K Q84H",3
"lib2","SARS-CoV-2","ATACCGATGGCATATG",2,90.98,10.64,-0.2,0.02,2.98,1.02,0,"1 nonsynonymous","T148P",1
"lib2","SARS-CoV-2","ATACCGATTTATGTAA",4,67.54,10.3,-0.53,0.06,2.93,1.05,0,">1 nonsynonymous","F44L N58R",2
"lib2","SARS-CoV-2","ATACCGATTTTGTAAA",6,53.33,9.92,-0.91,0.09,2.35,1.03,0,">1 nonsynonymous","Y35E F44V",2
"lib2","SARS-CoV-2","ATACCGCACTATACTA",1,24.95,9.33,-1.51,0.1,2.12,1,0,">1 nonsynonymous","C6I S139H",2
"lib2","SARS-CoV-2","ATACCGCAGTATGACC",2,53.21,9.9,-0.93,0.08,2.29,1.03,0,">1 nonsynonymous","L38Q A190E",2
"lib2","SARS-CoV-2","ATACCGCCAAACAGCC",3,44.64,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","L95Y G101W Y119V T140H P149K",5
"lib2","SARS-CoV-2","ATACCGCCCGCCCTCT",1,32.9,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","E10W V37M Y165E",3
"lib2","SARS-CoV-2","ATACCGCTCCTATTCA",5,125.99,10.41,-0.43,0.03,2.89,1.06,0,">1 nonsynonymous","E10P P149T T201C",3
"lib2","SARS-CoV-2","ATACCGCTGCGGCGAG",4,50.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A105L P197T",3
"lib2","SARS-CoV-2","ATACCGCTGGTTGCCA",18,2.93,NA,NA,NA,NA,NA,NA,"stop","A33S T55* P133R",3
"lib2","SARS-CoV-2","ATACCGGAATAACACA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7T V37S S43I L57*",4
"lib2","SARS-CoV-2","ATACCGGAATTCGCCG",4,51.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8S V37L S45L P96Y",4
"lib2","SARS-CoV-2","ATACCGGCATATAATG",1,16.4,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S29P C158K",2
"lib2","SARS-CoV-2","ATACCGGGACCAAACA",5,4.99,NA,NA,NA,NA,NA,NA,"stop","S45* V103S",2
"lib2","SARS-CoV-2","ATACCGTAATGACAGT",13,109.88,6,-4.84,1.11,1.5,1.19,0.01,">1 nonsynonymous","C31W T46P T148L",3
"lib2","SARS-CoV-2","ATACCGTACAGGACAG",3,44.44,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A14M Y91G K128L P161S",4
"lib2","SARS-CoV-2","ATACCGTATGCGACTT",29,496.97,10.27,-0.57,0.02,2.94,1.05,0,">1 nonsynonymous","V32M T85N T170S",3
"lib2","SARS-CoV-2","ATACCGTCACTAAAGA",4,73.34,9.23,-1.61,0.04,2.89,1.12,0,">1 nonsynonymous","P149C N157D",2
"lib2","SARS-CoV-2","ATACCGTTAGTCGTTA",7,56.41,9.99,-0.84,0.09,2.62,1.02,0,">1 nonsynonymous","N24L Q84E",2
"lib2","SARS-CoV-2","ATACCGTTATGTGGAG",3,64.62,8.41,-2.42,0.11,2.52,1.07,0,">1 nonsynonymous","N24I S113T Y143F",3
"lib2","SARS-CoV-2","ATACCGTTCAGCCTAA",3,26.23,10.91,0.07,0.09,2.86,1.17,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","ATACCTAACTGCCATT",4,157.65,10.68,-0.16,0.02,2.97,1.03,0,">1 nonsynonymous","N58D G174N",2
"lib2","SARS-CoV-2","ATACCTAATCGATATT",1,16.43,10.23,-0.61,0.05,2.99,1,0,">1 nonsynonymous","D90T I142L",2
"lib2","SARS-CoV-2","ATACCTACAATATCAG",8,65.39,7.84,-3,0.26,1.5,1.14,0.02,">1 nonsynonymous","T15L D98S Y143E",3
"lib2","SARS-CoV-2","ATACCTACATACAAAT",6,84.52,10.26,-0.58,0.07,2.87,1.05,0,">1 nonsynonymous","L60P S164T",2
"lib2","SARS-CoV-2","ATACCTACCATGCCAC",1,1.72,NA,NA,NA,NA,NA,NA,"stop","N13R A67N T85* S113R Y119E",5
"lib2","SARS-CoV-2","ATACCTACGGCAACAA",2,23.6,8.71,-2.12,0.31,1.7,1.22,0.03,">1 nonsynonymous","S19L V52I",2
"lib2","SARS-CoV-2","ATACCTAGATCCACTG",10,54.54,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G51L I88D Y121N",3
"lib2","SARS-CoV-2","ATACCTAGATGTGAGG",1,19.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q T85D A89I R136N P149G",5
"lib2","SARS-CoV-2","ATACCTAGGAAATAAC",2,1.06,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","ATACCTAGGACCTCGT",3,79.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S L57E E76M V103L G155R L187I",6
"lib2","SARS-CoV-2","ATACCTATAAATAAGA",5,12.29,NA,NA,NA,NA,NA,NA,"stop","T3C A22N D59G Y91L S113* L122K P149I",7
"lib2","SARS-CoV-2","ATACCTATCAAGGAGT",19,317.78,10.71,-0.13,0.04,2.92,1.08,0,">1 nonsynonymous","L122H S129E G152L",3
"lib2","SARS-CoV-2","ATACCTATCGAATATT",4,8.86,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y50C A105V F156N",3
"lib2","SARS-CoV-2","ATACCTCAAATACTAC",17,211.42,10.49,-0.35,0.02,2.93,1.05,0,">1 nonsynonymous","N4F K114T",2
"lib2","SARS-CoV-2","ATACCTCAAGCTAAAC",2,17.09,7.61,-3.23,0.26,1.5,1,0.04,">1 nonsynonymous","K56T N107W N151S",3
"lib2","SARS-CoV-2","ATACCTCACACCGTCA",1,16.78,9.11,-1.73,0.19,2.01,1.19,0.02,">1 nonsynonymous","P133T E141L",2
"lib2","SARS-CoV-2","ATACCTCACGTACTCT",2,9.34,6.25,-4.58,0.85,1.5,1.1,0.03,">1 nonsynonymous","T55R R73Y Y91I T100M",4
"lib2","SARS-CoV-2","ATACCTCATGGGTGAA",3,33.08,6,-4.84,1.29,3,1.21,0.02,">1 nonsynonymous","W106I N118S E135S",3
"lib2","SARS-CoV-2","ATACCTCATTCCACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","C61* Q84N",2
"lib2","SARS-CoV-2","ATACCTCCTCAAAAAA",8,70.16,10.7,-0.13,0.05,3,1.01,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","ATACCTCCTCTTTTAT",3,85.28,8.88,-1.95,0.13,2.18,1.1,0.01,">1 nonsynonymous","A105H F156R",2
"lib2","SARS-CoV-2","ATACCTCGCTCTGGTA",5,1.97,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","ATACCTCTACTACAAC",7,0.05,NA,NA,NA,NA,NA,NA,"stop","A81V F99C L122* Y165P",4
"lib2","SARS-CoV-2","ATACCTCTTTTTCCTG",1,27.17,10.3,-0.53,0.08,2.85,1.01,0,">1 nonsynonymous","T55G S139L",2
"lib2","SARS-CoV-2","ATACCTGAAACTTTCA",2,44.4,9.13,-1.7,0.09,2.89,1.03,0,">1 nonsynonymous","N1I Y119L",2
"lib2","SARS-CoV-2","ATACCTGAAAGTTGCG",1,5.59,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATACCTGAATTAGTTG",6,0.44,NA,NA,NA,NA,NA,NA,"stop","V103Y N110* G155I",3
"lib2","SARS-CoV-2","ATACCTGCCAGAAATT",8,40.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79V K87L G101H T148R Y159T",5
"lib2","SARS-CoV-2","ATACCTGCCGCGCCTC",4,23.46,10.91,0.08,0.1,2.86,1.08,0,">1 nonsynonymous","Y35L P197S",2
"lib2","SARS-CoV-2","ATACCTGCGAAATAGA",2,8.45,10,-0.83,0.22,2.71,1.17,0.02,">1 nonsynonymous","F134N G174Y",2
"lib2","SARS-CoV-2","ATACCTGGAACCGCTA",3,8.02,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6F S45V Y119M K132N",4
"lib2","SARS-CoV-2","ATACCTGGCGGAGAAG",2,11.09,9.45,-1.39,0.12,2.33,1,0.01,">1 nonsynonymous","P7L F44S P169R",3
"lib2","SARS-CoV-2","ATACCTGGGATACATT",6,121.14,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R25Y W106G G146Q Y175E",4
"lib2","SARS-CoV-2","ATACCTGTAAGAACAT",2,15.36,9.77,-1.07,0.17,2.61,1,0.01,">1 nonsynonymous","F44R S129P",2
"lib2","SARS-CoV-2","ATACCTGTACCAATTC",6,72.9,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D112K R179T",2
"lib2","SARS-CoV-2","ATACCTGTCGCTATAC",9,58.41,6,-4.84,1.35,1.5,1.11,0,">1 nonsynonymous","S36Q G101Y K132T",3
"lib2","SARS-CoV-2","ATACCTTAACCAAGTA",6,46.49,10.76,-0.08,0.05,2.95,1.01,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","ATACCTTAAGGTCGTA",4,91.95,9.01,-1.83,0.06,2.91,1.13,0,">1 nonsynonymous","K26I F156L G174E A190N",4
"lib2","SARS-CoV-2","ATACCTTACTCGGGAG",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H G146R P191Y",3
"lib2","SARS-CoV-2","ATACCTTACTGGTGTA",18,109.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F8K V65S N92F G146C",4
"lib2","SARS-CoV-2","ATACCTTATATTCCAA",3,26.51,9.31,-1.52,0.09,1.91,1.04,0.01,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","ATACCTTCAAAAGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Q V173F T201R",3
"lib2","SARS-CoV-2","ATACCTTCAATATAGA",9,47.09,9.55,-1.29,0.16,1.79,1.05,0.01,"1 nonsynonymous","F17E",1
"lib2","SARS-CoV-2","ATACCTTCCGGTGGTG",2,30.64,10.34,-0.49,0.08,2.97,1.06,0,">1 nonsynonymous","L5V T55Y E154P",3
"lib2","SARS-CoV-2","ATACCTTCTCAATAGT",1,12.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55G A81T S139G E154F",4
"lib2","SARS-CoV-2","ATACCTTGAAATTTAA",4,17.4,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N92D N107V Y119A S129T",4
"lib2","SARS-CoV-2","ATACCTTGTCGAACAA",10,146.74,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","A18L F99S N120F",3
"lib2","SARS-CoV-2","ATACCTTTCAAAAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16D C49S D98H S113Y",4
"lib2","SARS-CoV-2","ATACCTTTCCCTATAA",4,24.05,8.02,-2.82,0.41,1.5,1.18,0.06,">1 nonsynonymous","T15K K48D I72R D90Q I138K",5
"lib2","SARS-CoV-2","ATACCTTTTACCAAGA",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V G74R Q79R A89V I104E",5
"lib2","SARS-CoV-2","ATACGAAAAACCCTTT",2,100.56,10.83,-0.01,0.04,2.95,1.07,0,"1 nonsynonymous","P54F",1
"lib2","SARS-CoV-2","ATACGAAAAAGATTAG",8,54.86,10.71,-0.13,0.04,2.98,1.04,0,">1 nonsynonymous","K87R K198R",2
"lib2","SARS-CoV-2","ATACGAAAAGTCTATA",2,29.66,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14L D68R",2
"lib2","SARS-CoV-2","ATACGAAAGGAATATA",3,15.61,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","ATACGAAAGTTCATAC",5,125.55,9.8,-1.04,0.02,2.84,1.05,0,">1 nonsynonymous","P7V F62T Q163N",3
"lib2","SARS-CoV-2","ATACGAAATCCTCTTT",6,59.51,10.81,-0.03,0.07,2.9,1.12,0,">1 nonsynonymous","S129V K199Y",2
"lib2","SARS-CoV-2","ATACGAAATGATAGCT",6,47.55,10.23,-0.6,0.07,2.69,1.14,0,">1 nonsynonymous","V37S Y123T",2
"lib2","SARS-CoV-2","ATACGAAATTTGAGGC",8,10.54,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","ATACGAACACAAGGCA",5,31.93,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S19T N58F V77S N120L",4
"lib2","SARS-CoV-2","ATACGAACATAGAGTA",9,129.36,9.01,-1.83,0.19,1.5,1,0.02,">1 nonsynonymous","N4R Y35H F134V",3
"lib2","SARS-CoV-2","ATACGAACATTCAACG",1,9.94,10.76,-0.08,0.04,2.95,1.06,0,">1 nonsynonymous","D97H A190L",2
"lib2","SARS-CoV-2","ATACGAAGTTGTACTA",4,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F P82S",2
"lib2","SARS-CoV-2","ATACGAATGAGCTGGA",2,12.02,6.26,-4.58,2,1.5,1.22,0.06,">1 nonsynonymous","R25L A33L A42R",3
"lib2","SARS-CoV-2","ATACGACAAACACGAG",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21S A42G S200I",3
"lib2","SARS-CoV-2","ATACGACAAATAAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","G9K R27* L57H R179M",4
"lib2","SARS-CoV-2","ATACGACAAGAATTAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H Y50S L122F P191S",4
"lib2","SARS-CoV-2","ATACGACAAGACTATA",28,207.15,9.87,-0.96,0.05,2.03,1.08,0,">1 nonsynonymous","T15L S43R T63S E135R K198L",5
"lib2","SARS-CoV-2","ATACGACACACAGAAA",2,9.63,6,-4.84,2,3,1.2,0.04,">1 nonsynonymous","T46W G83M G101D G117R S129Q P149M V180F S184D",8
"lib2","SARS-CoV-2","ATACGACCAATATATT",5,59,9.78,-1.06,0.27,1.5,1,0.03,">1 nonsynonymous","P54L T100P",2
"lib2","SARS-CoV-2","ATACGACCCAAACTAA",2,13.09,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V71K A89K V173L",3
"lib2","SARS-CoV-2","ATACGACGAATGAAAG",2,17.19,7.96,-2.88,0.33,1.5,1.01,0.06,">1 nonsynonymous","I28A S43T D59H D90H S164Q",5
"lib2","SARS-CoV-2","ATACGACGACGCTTAA",5,51.54,9.74,-1.09,0.11,2.37,1.08,0.01,"1 nonsynonymous","F8A",1
"lib2","SARS-CoV-2","ATACGACGGACCTCAG",16,407.93,10.49,-0.35,0.04,2.95,1.05,0,">1 nonsynonymous","F8I K87F",2
"lib2","SARS-CoV-2","ATACGACGGGAACACA",4,25.91,6,-4.84,2,3,1.29,0.02,"1 nonsynonymous","F70G",1
"lib2","SARS-CoV-2","ATACGACTAAACAAAT",2,5.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G S41G S113A S139Y V173F",5
"lib2","SARS-CoV-2","ATACGACTAGAATTAA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P I80T A81E K132D",4
"lib2","SARS-CoV-2","ATACGACTATCGCTAA",1,3.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92A",1
"lib2","SARS-CoV-2","ATACGACTCCTCCTGT",5,53.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F62Q P96F Y119S R136C G146I T201K",6
"lib2","SARS-CoV-2","ATACGAGATACGTCAA",1,21.9,7.03,-3.8,0.27,1.6,1.07,0.02,">1 nonsynonymous","P96G N118F P149Q T201E",4
"lib2","SARS-CoV-2","ATACGAGATCACGAGT",7,55.15,9.96,-0.88,0.09,2.33,1.02,0,">1 nonsynonymous","T55S W106M Q144K",3
"lib2","SARS-CoV-2","ATACGAGCACATTCAC",9,29.54,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A89K V103P",2
"lib2","SARS-CoV-2","ATACGAGCTTATTGAA",11,92.95,8.6,-2.23,0.22,1.5,1,0.02,">1 nonsynonymous","T55N D90W C102V K198L",4
"lib2","SARS-CoV-2","ATACGAGGCGTAATTG",3,15.92,8.25,-2.58,0.13,1.84,1.06,0.01,">1 nonsynonymous","E10S P54R N107L",3
"lib2","SARS-CoV-2","ATACGAGGGATCCCAC",17,478.4,10.42,-0.42,0.02,2.91,1.07,0,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","ATACGAGTCCAATTAT",1,2.88,NA,NA,NA,NA,NA,NA,"stop","P149V T201*",2
"lib2","SARS-CoV-2","ATACGAGTCCCGCCCA",3,21.05,6.48,-4.36,0.37,2,1.13,0.01,">1 nonsynonymous","K94Q R127P",2
"lib2","SARS-CoV-2","ATACGAGTGTACGCCA",1,19.93,10.43,-0.41,0.08,2.9,1.13,0,">1 nonsynonymous","E10A L60V",2
"lib2","SARS-CoV-2","ATACGATAAAGCCGCT",5,2.71,NA,NA,NA,NA,NA,NA,"stop","G9L A42* C61T Y143G F156G",5
"lib2","SARS-CoV-2","ATACGATACACTTAGG",14,199.92,10.81,-0.02,0.04,2.95,1.06,0,">1 nonsynonymous","P54K K132I L187V",3
"lib2","SARS-CoV-2","ATACGATAGCACCCGA",2,44.71,10.73,-0.11,0.08,2.89,1.11,0,">1 nonsynonymous","L122G S164C",2
"lib2","SARS-CoV-2","ATACGATATTCATAGT",3,56.65,9.12,-1.72,0.07,2.48,1.08,0,">1 nonsynonymous","A22M G74S",2
"lib2","SARS-CoV-2","ATACGATTAAAGGGAA",12,137.5,9.44,-1.4,0.06,1.78,1.08,0,">1 nonsynonymous","G51I D97S K198A",3
"lib2","SARS-CoV-2","ATACGCAACGACTGAC",11,78.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V77R C150L",2
"lib2","SARS-CoV-2","ATACGCAACTACCATA",14,135.24,10.78,-0.06,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACGCAATCCGCTGC",1,29.66,9.95,-0.88,0.11,2.46,1.15,0.01,">1 nonsynonymous","L5R E135F",2
"lib2","SARS-CoV-2","ATACGCACCAAGACCA",6,50.87,9.65,-1.19,0.05,2.91,1.1,0,"1 nonsynonymous","N157D",1
"lib2","SARS-CoV-2","ATACGCACTGATCAAT",1,28.06,9.73,-1.1,0.14,2.11,1.01,0.01,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","ATACGCAGCAAACATC",11,71.65,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11S G51A W106N D137A",4
"lib2","SARS-CoV-2","ATACGCATAAAAACAC",5,135.97,10.79,-0.04,0.06,2.92,1.09,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","ATACGCATATACGCCT",5,57.5,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7A V71L N157C",3
"lib2","SARS-CoV-2","ATACGCATTGATAACA",7,1.21,NA,NA,NA,NA,NA,NA,"stop","K56* D97F S129A E141H V173W",5
"lib2","SARS-CoV-2","ATACGCCATAAATTAG",6,90.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F47D G83L F99L",3
"lib2","SARS-CoV-2","ATACGCCATACATGCC",2,21.01,9.62,-1.22,0.07,3,1,0,">1 nonsynonymous","Y119S K132L",2
"lib2","SARS-CoV-2","ATACGCCCACTAATTA",7,29.74,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10K D34N Q84W T148C G155T",5
"lib2","SARS-CoV-2","ATACGCCGTCATATTA",9,189.73,10.02,-0.82,0.07,2.22,1.04,0,"1 nonsynonymous","N24P",1
"lib2","SARS-CoV-2","ATACGCGAATGAGTAC",8,65.46,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9H F17S L38G G51S D98S",5
"lib2","SARS-CoV-2","ATACGCGACACTAAAA",5,61.62,8.53,-2.31,0.1,2.51,1.03,0,">1 nonsynonymous","G83R S113R",2
"lib2","SARS-CoV-2","ATACGCGACTACATTT",3,18.62,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y35G L95H R136A",3
"lib2","SARS-CoV-2","ATACGCGACTCAGTTA",1,3.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150K",1
"lib2","SARS-CoV-2","ATACGCGATTAGACAC",5,97,10.3,-0.54,0.06,2.84,1.08,0,"1 nonsynonymous","P133D",1
"lib2","SARS-CoV-2","ATACGCGCCATATCCA",3,72.73,10.81,-0.02,0.04,2.9,1.1,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","ATACGCGCGAATTAAT",5,7.08,NA,NA,NA,NA,NA,NA,"stop","T63* F134S T140L H189L",4
"lib2","SARS-CoV-2","ATACGCGTAGTAATCC",2,5.16,9.34,-1.5,0.43,1.89,1.28,0.04,">1 nonsynonymous","T15D C61R K114W K128L S164T",5
"lib2","SARS-CoV-2","ATACGCGTATATATAA",4,107.46,10.72,-0.12,0.04,2.92,1.09,0,">1 nonsynonymous","G9Y K199C",2
"lib2","SARS-CoV-2","ATACGCTAACGCGTCT",3,27.48,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8K A14V N30Y S113V G146L L187R",6
"lib2","SARS-CoV-2","ATACGCTAATTATTTA",2,8.81,10.76,-0.08,0.16,3,1.04,0.01,">1 nonsynonymous","N4T N58M Q84M",3
"lib2","SARS-CoV-2","ATACGCTACCTCAGCT",5,65.2,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T46A D68Q V103T S113E N157W",5
"lib2","SARS-CoV-2","ATACGCTACGCAACTG",4,8.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V A14C S41D Q144L T170M V180T H189N",7
"lib2","SARS-CoV-2","ATACGCTAGTGGATCA",9,76.97,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","L5A K56P N92L Q176R",4
"lib2","SARS-CoV-2","ATACGCTATGACAGGG",1,133.22,10.36,-0.48,0.04,2.92,1.07,0,">1 nonsynonymous","D90M N120M V153T",3
"lib2","SARS-CoV-2","ATACGCTCCCAACCTT",8,84.86,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I80F N107G L162N",3
"lib2","SARS-CoV-2","ATACGCTCTTCTAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44K T55E",2
"lib2","SARS-CoV-2","ATACGCTGAAGTCTAA",14,196.66,10.07,-0.76,0.06,2.61,1.03,0,"1 nonsynonymous","R25S",1
"lib2","SARS-CoV-2","ATACGCTTGCTCAAAA",9,128.5,9.99,-0.85,0.06,2.36,1.06,0,"1 nonsynonymous","A81F",1
"lib2","SARS-CoV-2","ATACGGAACTTAAGGT",2,49.36,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12R I28S T55F",3
"lib2","SARS-CoV-2","ATACGGAATGTATCTA",4,10.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A42I Y91S C150G Q163V",4
"lib2","SARS-CoV-2","ATACGGAATTAATCCA",11,294.15,10.64,-0.19,0.03,2.99,1.03,0,">1 nonsynonymous","F44L L122T",2
"lib2","SARS-CoV-2","ATACGGACAGTTTAAC",14,174.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4L C158V",2
"lib2","SARS-CoV-2","ATACGGAGGATCTAGT",1,5.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","ATACGGAGGTACTTCA",19,3.27,NA,NA,NA,NA,NA,NA,"stop","F12Y A33* V71N",3
"lib2","SARS-CoV-2","ATACGGATAAATTGCC",1,69.61,10.06,-0.78,0.07,2.64,1.09,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","ATACGGATACACAATA",8,88.68,10.52,-0.31,0.03,2.96,1.05,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","ATACGGATGATGCGCT",2,25.2,10.76,-0.07,0.08,2.95,1.08,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","ATACGGCACTAACCCA",3,110.2,10.54,-0.3,0.04,2.86,1.05,0,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","ATACGGCCACCTTAAG",1,9.9,10.95,0.11,0.1,3,1.02,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","ATACGGCCCTGTATGA",2,30.6,6,-4.84,2,2.01,1.08,0.01,">1 nonsynonymous","V65L K87H L95I T148C C158S Q176R",6
"lib2","SARS-CoV-2","ATACGGCGAAATCCGG",3,151.15,9.29,-1.55,0.06,1.99,1.06,0,">1 nonsynonymous","G9L Y91S",2
"lib2","SARS-CoV-2","ATACGGCTTAAATGAA",4,55.84,9.5,-1.33,0.18,1.84,1.09,0.01,">1 nonsynonymous","G9Q V52C N58Q P133V",4
"lib2","SARS-CoV-2","ATACGGGACTACTAGG",13,129.56,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y21L Y50A T63N D90F",4
"lib2","SARS-CoV-2","ATACGGGCGTAGTCAT",5,67.23,9.15,-1.68,0.07,2.06,1.07,0,">1 nonsynonymous","F44W T63P P149L G174Y",4
"lib2","SARS-CoV-2","ATACGGGGATTATTTC",1,13.56,10.59,-0.24,0.08,2.9,1.1,0,"1 nonsynonymous","G83N",1
"lib2","SARS-CoV-2","ATACGGTACATATCAC",7,90.81,6,-4.84,2,3,1.21,0,">1 nonsynonymous","E76D D90A G146L Y165P",4
"lib2","SARS-CoV-2","ATACGGTAGACGAGTA",9,42.11,7.01,-3.82,0.24,1.83,1.19,0.01,">1 nonsynonymous","C6S T55V R78E G155A S184R",5
"lib2","SARS-CoV-2","ATACGGTATCCCTACA",2,29.91,6.06,-4.78,1.2,1.5,1.27,0.04,">1 nonsynonymous","I2T F12C V32A L60N A81G G117Q A145C P149N",8
"lib2","SARS-CoV-2","ATACGGTATCTGTGTT",1,11.76,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","N92L Q163A",2
"lib2","SARS-CoV-2","ATACGGTGACGATTGT",1,35.31,10.8,-0.04,0.05,3,1.01,0,">1 nonsynonymous","I2F P54S",2
"lib2","SARS-CoV-2","ATACGGTGCACTTGTT",13,117.77,8.73,-2.11,0.09,2.01,1.11,0,">1 nonsynonymous","N58D Y91F S108Q T148N",4
"lib2","SARS-CoV-2","ATACGGTTAAGTTTAG",3,60.52,10.83,-0.01,0.04,2.96,1.05,0,"1 nonsynonymous","L111E",1
"lib2","SARS-CoV-2","ATACGGTTAATATCCG",5,26.15,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G74S L131G",2
"lib2","SARS-CoV-2","ATACGGTTACCGAAGT",3,34.91,9.28,-1.55,0.06,2.9,1.1,0,"1 nonsynonymous","E154F",1
"lib2","SARS-CoV-2","ATACGTAAAAAGTGTC",8,118.11,10.84,0,0.07,2.98,1.05,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","ATACGTAAACCCGTAT",2,49.51,9.86,-0.98,0.09,2.06,1,0,">1 nonsynonymous","T3I F8P",2
"lib2","SARS-CoV-2","ATACGTAACACACATG",2,4.08,NA,NA,NA,NA,NA,NA,"stop","V65S D112* K128F E135G",4
"lib2","SARS-CoV-2","ATACGTAAGGAGACTG",2,28.76,10.8,-0.03,0.04,3,1.03,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","ATACGTAATAATATCA",9,110.5,10.26,-0.57,0.07,2.74,1.01,0,">1 nonsynonymous","D59T P96D",2
"lib2","SARS-CoV-2","ATACGTACACTAAGAG",1,29.07,10.87,0.03,0.09,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACGTACCCTCCAAC",5,19.99,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37R K94P Y121T K128F",4
"lib2","SARS-CoV-2","ATACGTACGTCTCAAT",2,34.41,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F62S D68T Y91P",3
"lib2","SARS-CoV-2","ATACGTACTATGGCTA",4,25.98,6.12,-4.72,0.45,1.5,1.08,0,">1 nonsynonymous","P96S K128E I138L G146E G155R",5
"lib2","SARS-CoV-2","ATACGTACTTCGTATC",8,122.26,9.85,-0.98,0.06,2.74,1.01,0,">1 nonsynonymous","N120R Q144L",2
"lib2","SARS-CoV-2","ATACGTAGGTTAAAGG",5,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R Y50L L60I N109E L162R",5
"lib2","SARS-CoV-2","ATACGTAGTAATTATA",5,55.55,9.88,-0.95,0.08,2.18,1.02,0,"1 nonsynonymous","V11N",1
"lib2","SARS-CoV-2","ATACGTATGGAGTAGG",4,66.02,9.8,-1.04,0.15,1.88,1.06,0.01,"1 nonsynonymous","R25E",1
"lib2","SARS-CoV-2","ATACGTATGTATCGAG",1,12.09,7.94,-2.89,0.36,2.15,1,0.05,">1 nonsynonymous","L95V W106G G116W",3
"lib2","SARS-CoV-2","ATACGTATTAGATTAT",4,26.55,8.63,-2.2,0.3,1.57,1.04,0.03,">1 nonsynonymous","V11N A42R L60R S113G",4
"lib2","SARS-CoV-2","ATACGTCACCAAAAGG",5,104.99,8.67,-2.17,0.08,2.81,1.06,0,"1 nonsynonymous","S113K",1
"lib2","SARS-CoV-2","ATACGTCCAAAAAACT",6,22.84,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6K T100V E135R T140Y F167V K198R",6
"lib2","SARS-CoV-2","ATACGTCCAAACCTGA",5,121.21,6,-4.84,1.39,1.5,1.14,0.01,">1 nonsynonymous","A105T G166C Q168K",3
"lib2","SARS-CoV-2","ATACGTCCTACTCTAT",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V E186V",2
"lib2","SARS-CoV-2","ATACGTCGAGCCGGGT",7,24.55,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K56I G86S N118G L183F",4
"lib2","SARS-CoV-2","ATACGTCGCACGGATT",6,95.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12R S36K I142M C158G",4
"lib2","SARS-CoV-2","ATACGTCTGTGAAATA",3,36.45,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y35S A89N D90Y W106T I138C S164A",6
"lib2","SARS-CoV-2","ATACGTCTTTAGCTAG",5,146.52,8.37,-2.47,0.15,2.1,1.04,0.01,">1 nonsynonymous","G152L Q176A K199H",3
"lib2","SARS-CoV-2","ATACGTGGAAACGTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W N107C",2
"lib2","SARS-CoV-2","ATACGTGTCAGGAACA",4,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71L",1
"lib2","SARS-CoV-2","ATACGTTATATAAGAA",2,31.3,9.59,-1.25,0.12,2.37,1.1,0.01,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","ATACGTTATATAGCAA",4,35.35,8.71,-2.13,0.25,1.71,1.22,0.04,">1 nonsynonymous","S19Y T201R",2
"lib2","SARS-CoV-2","ATACGTTCAATAAGTT",1,25.83,8.06,-2.77,0.38,1.57,1.11,0.05,">1 nonsynonymous","D34S D97H W106A N120K",4
"lib2","SARS-CoV-2","ATACGTTCGTTGCGCA",1,11.12,8.99,-1.85,0.26,1.59,1.05,0.04,">1 nonsynonymous","N13A V37Q T63R S69L",4
"lib2","SARS-CoV-2","ATACGTTGAGATTAAT",17,447.6,10,-0.83,0.05,2.57,1.01,0,">1 nonsynonymous","P7K N64K D90Y",3
"lib2","SARS-CoV-2","ATACGTTGTAACACAT",3,65.65,10.78,-0.06,0.02,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACGTTTCAACCCTT",4,134.09,10.51,-0.32,0.04,2.88,1.1,0,">1 nonsynonymous","A14E T201K",2
"lib2","SARS-CoV-2","ATACTAAAAAAACACT",1,22.49,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","A18T C61F L95W",3
"lib2","SARS-CoV-2","ATACTAAAAAATAAGT",12,234.71,10.02,-0.82,0.07,2.49,1.07,0,">1 nonsynonymous","A14L I104V K198G",3
"lib2","SARS-CoV-2","ATACTAAAATTTCGAT",10,120.56,10.68,-0.15,0.04,2.93,1.06,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","ATACTAAACCCGCTAA",10,39.55,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","L38Y Y50N",2
"lib2","SARS-CoV-2","ATACTAAACTTTAAAA",8,76.16,9.6,-1.24,0.11,1.71,1.06,0.01,">1 nonsynonymous","D59Y K94G",2
"lib2","SARS-CoV-2","ATACTAAAGAATTCGC",7,40.07,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F8S K48C C61N F70K K87Q L95S",6
"lib2","SARS-CoV-2","ATACTAAAGATGATTC",1,8.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R Y121L R127L",3
"lib2","SARS-CoV-2","ATACTAAAGCCTGTAA",11,251.03,9.82,-1.02,0.03,2.94,1.03,0,">1 nonsynonymous","Y121S V153T",2
"lib2","SARS-CoV-2","ATACTAAAGCTATTAA",4,0.98,NA,NA,NA,NA,NA,NA,"stop","G9* N58M C158G",3
"lib2","SARS-CoV-2","ATACTAAAGTAGTCAG",2,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R Y50T",2
"lib2","SARS-CoV-2","ATACTAAATTATATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F12* G101H N107S E154L",4
"lib2","SARS-CoV-2","ATACTAACAAAGTACC",3,57.45,10.53,-0.31,0.08,2.77,1.12,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","ATACTAACGCAAATCT",1,19.22,9.62,-1.21,0.3,1.5,1.06,0.07,">1 nonsynonymous","A33S C49Y N64P",3
"lib2","SARS-CoV-2","ATACTAACTTTCACTA",7,84.3,6.41,-4.43,0.67,1.5,1.21,0.03,">1 nonsynonymous","W106V R127F G155T T201V",4
"lib2","SARS-CoV-2","ATACTAAGTGAAAATT",4,47.96,10.13,-0.71,0.06,2.77,1.02,0,"1 nonsynonymous","D34W",1
"lib2","SARS-CoV-2","ATACTAATAAAATGAG",10,68.51,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","I80S D90I H189T",3
"lib2","SARS-CoV-2","ATACTAATACTGAAAC",31,211.92,10.33,-0.51,0.03,2.83,1.05,0,">1 nonsynonymous","D34C S43M",2
"lib2","SARS-CoV-2","ATACTAATAGTTAACA",9,1.08,NA,NA,NA,NA,NA,NA,"stop","K56* S139*",2
"lib2","SARS-CoV-2","ATACTAATCTAAACAG",3,42.72,10.32,-0.51,0.05,2.8,1.1,0,">1 nonsynonymous","L60F W106M L122S",3
"lib2","SARS-CoV-2","ATACTAATGCTAACAA",3,52.66,8.39,-2.45,0.11,2.89,1.04,0.01,">1 nonsynonymous","Y39T I104L Y143A K198L",4
"lib2","SARS-CoV-2","ATACTAATGCTATTTG",4,93.05,8.25,-2.59,0.12,1.96,1.06,0.01,">1 nonsynonymous","L5M E76T L125V A145V",4
"lib2","SARS-CoV-2","ATACTAATGGGATTTA",1,0.34,NA,NA,NA,NA,NA,NA,"stop","G172* H189T",2
"lib2","SARS-CoV-2","ATACTAATTAATGCAT",5,2.51,NA,NA,NA,NA,NA,NA,"stop","S19* P169T",2
"lib2","SARS-CoV-2","ATACTAATTCGCCTGC",7,67.29,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y66L A105E N110R N120W Q144K G155Q",6
"lib2","SARS-CoV-2","ATACTACAAATATATT",5,69.09,8.39,-2.45,0.14,1.88,1.09,0.01,">1 nonsynonymous","T3N G9K Y165V",3
"lib2","SARS-CoV-2","ATACTACACGAAACTA",8,50.74,7.06,-3.77,0.47,1.5,1.21,0.05,">1 nonsynonymous","A14D V20L D97E",3
"lib2","SARS-CoV-2","ATACTACCACCAAAGG",8,180.72,10.07,-0.77,0.03,2.97,1.03,0,">1 nonsynonymous","Q168T S200K",2
"lib2","SARS-CoV-2","ATACTACCGAGTATGC",18,375.07,9.81,-1.03,0.02,2.92,1.06,0,">1 nonsynonymous","G74S K114T L122R",3
"lib2","SARS-CoV-2","ATACTACCGCATTAAT",4,6.22,7.01,-3.82,0.43,1.73,1.23,0.03,">1 nonsynonymous","F44T S113L P191L",3
"lib2","SARS-CoV-2","ATACTACCGCGATGAA",2,30.56,10.42,-0.42,0.06,2.83,1.2,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","ATACTACGAAAAATCA",4,24.17,9.41,-1.43,0.13,1.65,1.03,0.01,">1 nonsynonymous","N4L K56S Y91C D98T",4
"lib2","SARS-CoV-2","ATACTACGAATTGTTA",3,2.65,NA,NA,NA,NA,NA,NA,"stop","S69Q G83M V103R N107* F160C T201L",6
"lib2","SARS-CoV-2","ATACTACGACCAAATC",3,34.53,10.71,-0.12,0.06,2.98,1,0,">1 nonsynonymous","P54M T63C",2
"lib2","SARS-CoV-2","ATACTACTCATTAACG",4,7.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R P82Y I138T R179T",4
"lib2","SARS-CoV-2","ATACTACTGAGACGCT",5,33.23,10.93,0.09,0.07,3,1.04,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","ATACTACTGAGAGGAA",8,108.88,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T100L K114S R127F",3
"lib2","SARS-CoV-2","ATACTAGAGAATTGAG",8,54.08,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N1G V37N I88N",3
"lib2","SARS-CoV-2","ATACTAGATAATAACA",3,25.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D34Y G155V L162M",3
"lib2","SARS-CoV-2","ATACTAGATCAAACAG",7,41.23,9.48,-1.36,0.11,2.23,1.03,0.01,">1 nonsynonymous","S19Q A42T D98T",3
"lib2","SARS-CoV-2","ATACTAGCAAGGCGGA",3,53.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S29P D59S V65T K87C I104T F156P F167W T201Y",8
"lib2","SARS-CoV-2","ATACTAGCGATACCAT",6,72.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40V W106Q R136W",3
"lib2","SARS-CoV-2","ATACTAGCGATTACAG",6,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y F17V S41F G86M",4
"lib2","SARS-CoV-2","ATACTAGCTAATTGCC",4,101.32,10.31,-0.53,0.03,2.97,1.05,0,"1 nonsynonymous","G155H",1
"lib2","SARS-CoV-2","ATACTAGGAAAAATGC",1,7.96,10.83,-0.01,0.06,3,1.06,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","ATACTAGTACACCCCC",2,32.74,10.71,-0.12,0.04,2.93,1.08,0,">1 nonsynonymous","Y35S Q163A",2
"lib2","SARS-CoV-2","ATACTAGTATTCGCTT",11,216.59,10.74,-0.1,0.03,2.97,1.04,0,">1 nonsynonymous","K48M F160N",2
"lib2","SARS-CoV-2","ATACTAGTGGAATTAT",17,66.25,6.74,-4.09,0.54,1.5,1.14,0.05,">1 nonsynonymous","V77P D97M",2
"lib2","SARS-CoV-2","ATACTATAAATAGACG",1,9.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","ATACTATAAGCGCAAA",5,24.22,6.24,-4.59,0.57,1.5,1.09,0.01,">1 nonsynonymous","N4A A33L G83D A89C G146R",5
"lib2","SARS-CoV-2","ATACTATATTAAGGTT",3,23.05,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V37Y T55V I88E K114A F156P",5
"lib2","SARS-CoV-2","ATACTATATTGTAAGC",5,43.93,9.53,-1.3,0.1,1.89,1.08,0,">1 nonsynonymous","S29W D98F K114L",3
"lib2","SARS-CoV-2","ATACTATGAGCTACGA",1,16.04,10.32,-0.52,0.36,1.74,1.04,0.07,">1 nonsynonymous","F160N L183T",2
"lib2","SARS-CoV-2","ATACTATGCCTTTTCC",1,27.08,10.08,-0.75,0.17,1.9,1.02,0.01,">1 nonsynonymous","R27E S41P P54K N120I N130W N171V",6
"lib2","SARS-CoV-2","ATACTATGGGGTAATC",5,43.84,10.81,-0.02,0.05,2.8,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTATGTTTTTAAC",3,12.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G152S P177G",2
"lib2","SARS-CoV-2","ATACTATTCACGTAAG",3,64.63,9.69,-1.14,0.16,2.09,1.2,0.01,">1 nonsynonymous","E10S P161Q",2
"lib2","SARS-CoV-2","ATACTCAAATCCCTAG",1,11.13,8.55,-2.29,0.09,2.77,1,0,">1 nonsynonymous","P54T G83H Y119C",3
"lib2","SARS-CoV-2","ATACTCAAATGCCCAG",1,8.12,10.96,0.12,0.16,3,1.02,0,">1 nonsynonymous","N64S V115R",2
"lib2","SARS-CoV-2","ATACTCAACAAGGAAA",2,9.3,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y50N V103G",2
"lib2","SARS-CoV-2","ATACTCAATTGTGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","V52D D97G E141* F156T",4
"lib2","SARS-CoV-2","ATACTCACAACCTCTC",5,80.44,10.39,-0.45,0.04,2.96,1.06,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","ATACTCACCACTGACC",8,129.03,10.81,-0.03,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTCACCTTGAAAT",23,313.2,10.77,-0.07,0.03,2.89,1.09,0,">1 nonsynonymous","K114A E154Q",2
"lib2","SARS-CoV-2","ATACTCAGCACGATTT",8,80.36,7.56,-3.28,0.21,1.5,1.13,0.01,">1 nonsynonymous","N120M N151K L162Q",3
"lib2","SARS-CoV-2","ATACTCAGCCGGCTAA",1,19.1,10.19,-0.65,0.09,2.51,1,0,">1 nonsynonymous","N1M A22H S45Y",3
"lib2","SARS-CoV-2","ATACTCAGCCGGGAAA",1,19.59,10.57,-0.26,0.09,2.75,1.25,0,"1 nonsynonymous","Y143H",1
"lib2","SARS-CoV-2","ATACTCAGGCCCCGCT",1,29.32,6,-4.84,1.67,1.5,1.29,0.05,">1 nonsynonymous","N4D R136S F167L",3
"lib2","SARS-CoV-2","ATACTCATACGGTTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","ATACTCATAGTGTAAG",2,16.72,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATACTCATCGCAGATA",5,0.52,NA,NA,NA,NA,NA,NA,"stop","A33* C61K D112Y F160W G174L K199N",6
"lib2","SARS-CoV-2","ATACTCCAAAAAATGA",4,0.5,NA,NA,NA,NA,NA,NA,"stop","G86* Y143L",2
"lib2","SARS-CoV-2","ATACTCCAAATATGAT",11,94.19,9.72,-1.12,0.08,1.85,1.05,0,">1 nonsynonymous","K56H D68Y",2
"lib2","SARS-CoV-2","ATACTCCACGCAACGC",6,33.76,8.73,-2.11,0.21,1.82,1.07,0.03,">1 nonsynonymous","F44V K56S W106E",3
"lib2","SARS-CoV-2","ATACTCCAGCAACAAA",1,29.07,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D90V Y143A V173T",3
"lib2","SARS-CoV-2","ATACTCCAGGAGCATG",11,140.21,8.47,-2.37,0.09,1.87,1.11,0,">1 nonsynonymous","I28K Y175H",2
"lib2","SARS-CoV-2","ATACTCCATAACAATG",17,104.96,9.91,-0.92,0.09,2.18,1.03,0,">1 nonsynonymous","A14G D34V",2
"lib2","SARS-CoV-2","ATACTCCCATTACAGT",4,16.9,10.77,-0.06,0.07,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTCCCATTTTTTC",6,61.24,9.5,-1.33,0.07,1.88,1.05,0,"1 nonsynonymous","I88A",1
"lib2","SARS-CoV-2","ATACTCCCCCGATTTA",1,12.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A89L D98V",2
"lib2","SARS-CoV-2","ATACTCCCCTTAGGAA",3,15.32,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","S53P T63L W106V G174W",4
"lib2","SARS-CoV-2","ATACTCCGTATAATCA",2,4.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G74Y",1
"lib2","SARS-CoV-2","ATACTCCGTTAACACA",10,132.62,8.33,-2.5,0.13,2.71,1.07,0.01,">1 nonsynonymous","Y175L S184T",2
"lib2","SARS-CoV-2","ATACTCCTTGAGTGAA",1,44.6,10.82,-0.01,0.07,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTCGAATGTAAGG",3,81.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y91D P96S P177T A192G",4
"lib2","SARS-CoV-2","ATACTCGATGTAAAAT",5,9.68,10.13,-0.71,0.1,2.96,1,0,">1 nonsynonymous","T63K Y93F",2
"lib2","SARS-CoV-2","ATACTCGCAAGAGACC",1,54.26,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","K114D L162S Y178E K198F",4
"lib2","SARS-CoV-2","ATACTCGCAATAAAAT",8,1.21,NA,NA,NA,NA,NA,NA,"stop","V52T S69* N107A",3
"lib2","SARS-CoV-2","ATACTCGCTAATAAAG",3,30.37,10.7,-0.14,0.08,2.93,1.08,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","ATACTCGCTATAAACA",1,15.55,9.09,-1.75,0.14,1.92,1.04,0.01,">1 nonsynonymous","A42L D68Y",2
"lib2","SARS-CoV-2","ATACTCGGTTTCGCAT",4,56.71,10.88,0.05,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTCTACTGCTAGT",1,9.73,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","I2M N118L P177V",3
"lib2","SARS-CoV-2","ATACTCTAGCACCATG",1,22.52,8.77,-2.07,0.07,2.96,1.07,0,">1 nonsynonymous","Y39R K114P I142L",3
"lib2","SARS-CoV-2","ATACTCTATTATGCTA",3,37.91,6.33,-4.5,0.52,1.5,1.22,0.02,">1 nonsynonymous","K26L L60N N107D C195T",4
"lib2","SARS-CoV-2","ATACTCTCCGCTGCTT",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S G9L K56A Y119F Q176M T201R",6
"lib2","SARS-CoV-2","ATACTCTCGATTCCTA",5,37.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C158L V180Y",2
"lib2","SARS-CoV-2","ATACTCTTACTCAGAA",4,44.42,10.28,-0.55,0.05,2.95,1.07,0,">1 nonsynonymous","A18N N64P K87M",3
"lib2","SARS-CoV-2","ATACTCTTCGATAGCC",3,11.36,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G51Y K94A T100G S139L",4
"lib2","SARS-CoV-2","ATACTCTTGGATAAGG",15,305.47,8.02,-2.81,0.19,1.52,1.09,0.01,">1 nonsynonymous","P7L Q176C",2
"lib2","SARS-CoV-2","ATACTGAAACCAACTT",2,21.44,9.57,-1.27,0.1,2.43,1.11,0,">1 nonsynonymous","V11L C31F T85D",3
"lib2","SARS-CoV-2","ATACTGAAACGTCTAA",7,119.51,9.75,-1.09,0.07,2.45,1.03,0,">1 nonsynonymous","V11W S129L",2
"lib2","SARS-CoV-2","ATACTGAAATTAAGAT",8,87.11,9.26,-1.58,0.12,1.5,1.03,0.01,">1 nonsynonymous","N40S W106I Y121H",3
"lib2","SARS-CoV-2","ATACTGAACGCGAGAA",10,50.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20R S113K",2
"lib2","SARS-CoV-2","ATACTGAACTTTCCTA",5,125.64,10.07,-0.77,0.07,2.64,1.09,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","ATACTGAAGAAAATCC",1,53.89,10.67,-0.17,0.04,2.99,1,0,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","ATACTGAAGAATAGAT",19,236.34,10.82,-0.01,0.05,2.91,1.11,0,">1 nonsynonymous","Y35L A42Q",2
"lib2","SARS-CoV-2","ATACTGAAGTCATTTT",2,21.6,9.07,-1.76,0.14,2.27,1.09,0.01,"1 nonsynonymous","Y165Q",1
"lib2","SARS-CoV-2","ATACTGAATTGTAAGC",4,20.19,9.74,-1.09,0.12,2.76,1.02,0.01,">1 nonsynonymous","N118Y G152D H189R",3
"lib2","SARS-CoV-2","ATACTGACAATAAAAC",4,34.86,10.79,-0.05,0.06,2.92,1.08,0,"1 nonsynonymous","F44Y",1
"lib2","SARS-CoV-2","ATACTGACAGCAAAAA",5,27.33,9.04,-1.79,0.46,1.5,1,0.08,">1 nonsynonymous","I28L Y50C D90K H189S",4
"lib2","SARS-CoV-2","ATACTGACCTTCATAC",5,28.06,10.55,-0.28,0.08,2.89,1.06,0,">1 nonsynonymous","L5K T46A",2
"lib2","SARS-CoV-2","ATACTGAGATGGCAAT",4,22.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3L P133V P161Y",3
"lib2","SARS-CoV-2","ATACTGAGCAACTGTA",11,118.17,6,-4.84,1.49,3,1.11,0,">1 nonsynonymous","D34C A89E T148S",3
"lib2","SARS-CoV-2","ATACTGAGCCTAACGC",13,83.73,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F12G T46S D59R T85M K128G T148I H189R",7
"lib2","SARS-CoV-2","ATACTGAGGTCAGCCA",4,8.66,NA,NA,NA,NA,NA,NA,"stop","T55C G83N V173*",3
"lib2","SARS-CoV-2","ATACTGATCATTAGAA",8,47.04,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D90M T100V V103W",3
"lib2","SARS-CoV-2","ATACTGATCCACGTCT",5,148.49,10.78,-0.05,0.07,2.93,1.1,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","ATACTGATCCAGGGGT",7,39.67,6.32,-4.52,0.68,1.5,1.14,0.03,">1 nonsynonymous","K94C R127L A145T",3
"lib2","SARS-CoV-2","ATACTGATGCAACCGA",16,275.47,10.3,-0.53,0.03,2.97,1.04,0,">1 nonsynonymous","G51K K87N",2
"lib2","SARS-CoV-2","ATACTGATGGACAGTC",1,33.09,10.88,0.04,0.09,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTGATGTATCTAA",6,70.86,10.69,-0.14,0.04,2.94,1.07,0,">1 nonsynonymous","Y39V G196V",2
"lib2","SARS-CoV-2","ATACTGATTTATTAGG",3,30.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F62K A105D N118S",3
"lib2","SARS-CoV-2","ATACTGCAACTGAACC",1,0.85,NA,NA,NA,NA,NA,NA,"stop","A105* S113K N151F",3
"lib2","SARS-CoV-2","ATACTGCAAGAATGAA",2,43.51,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F44S T85V S113D Y143E N171G",5
"lib2","SARS-CoV-2","ATACTGCATATTGAAC",12,271.88,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N107A S164L Q176Y",3
"lib2","SARS-CoV-2","ATACTGCCCTAACCGG",3,105.95,9.54,-1.3,0.09,2.27,1.03,0,">1 nonsynonymous","F70M G155T",2
"lib2","SARS-CoV-2","ATACTGCGCAAAGTAA",4,43.1,10.76,-0.07,0.04,2.9,1.09,0,">1 nonsynonymous","T3S Y35L V173N",3
"lib2","SARS-CoV-2","ATACTGCGCAATATAT",3,24.57,8.65,-2.19,0.22,1.58,1.07,0.01,">1 nonsynonymous","A42Y N157V",2
"lib2","SARS-CoV-2","ATACTGCTCGATATGC",3,29.04,9.35,-1.49,0.17,2.17,1.17,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","ATACTGCTGGGAGGAT",4,91.91,8.81,-2.02,0.07,2.69,1.04,0,">1 nonsynonymous","Y123V N157S",2
"lib2","SARS-CoV-2","ATACTGGAAAGACACC",2,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","ATACTGGAGATGCAGA",10,31.92,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A42S G51W N120L L183N",4
"lib2","SARS-CoV-2","ATACTGGATTGAGCTA",2,20.27,10.05,-0.79,0.13,2.51,1,0.01,">1 nonsynonymous","F12L F47Y",2
"lib2","SARS-CoV-2","ATACTGGCAATACAAA",5,125.39,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","S19Y V37S I72A Y178T",4
"lib2","SARS-CoV-2","ATACTGGCAGAAAAAT",6,7.46,NA,NA,NA,NA,NA,NA,"stop","T3L T140* G166V",3
"lib2","SARS-CoV-2","ATACTGGGAAGACCAA",1,8.92,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","Y121L Y143R G152P",3
"lib2","SARS-CoV-2","ATACTGGGACAAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","S29A T85* A105I R127L F156V",5
"lib2","SARS-CoV-2","ATACTGGGTCGCTTCA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R R179P K199P",3
"lib2","SARS-CoV-2","ATACTGGTCACTATAC",7,68.06,9.35,-1.49,0.06,2.02,1.03,0,">1 nonsynonymous","G9Y R78Y Q84M D90Y D98S",5
"lib2","SARS-CoV-2","ATACTGGTTATAGATA",6,292.75,10.03,-0.81,0.04,2.86,1.04,0,">1 nonsynonymous","C31Q S43L T55F",3
"lib2","SARS-CoV-2","ATACTGTACAGTTATC",6,14.99,NA,NA,NA,NA,NA,NA,"stop","R25S S36Y K87H F99K N107* G174L",6
"lib2","SARS-CoV-2","ATACTGTACATGAAAT",15,5.3,NA,NA,NA,NA,NA,NA,"stop","K87* R127* Q144P",3
"lib2","SARS-CoV-2","ATACTGTACCCGCCAT",2,41.06,10.53,-0.31,0.06,2.86,1.09,0,">1 nonsynonymous","K128V E141F",2
"lib2","SARS-CoV-2","ATACTGTACCTCACAT",10,216.8,10.05,-0.78,0.04,2.83,1.02,0,">1 nonsynonymous","G9V F44A K114T",3
"lib2","SARS-CoV-2","ATACTGTATGCGTATC",8,118.62,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Q79E F99G N107C",3
"lib2","SARS-CoV-2","ATACTGTCTACCAAAA",7,4.95,NA,NA,NA,NA,NA,NA,"stop","Y39W D68*",2
"lib2","SARS-CoV-2","ATACTGTTATTTTACT",3,83.34,10.87,0.03,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTGTTCAGCGAAG",6,1.45,NA,NA,NA,NA,NA,NA,"stop","A18* N120D",2
"lib2","SARS-CoV-2","ATACTTAAAAATACTG",2,4.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114F",1
"lib2","SARS-CoV-2","ATACTTAAAACCAAAA",8,87.42,6.32,-4.52,0.8,1.5,1.27,0.04,">1 nonsynonymous","Y39D C49S",2
"lib2","SARS-CoV-2","ATACTTAAAATTAAAT",4,100.57,10.73,-0.11,0.03,2.96,1.04,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","ATACTTAACCCAAGAG",2,13.58,10.68,-0.15,0.08,2.89,1.15,0,">1 nonsynonymous","A42C T201F",2
"lib2","SARS-CoV-2","ATACTTAACTGCACGG",9,84.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I80G N109L L131F",3
"lib2","SARS-CoV-2","ATACTTAATAATACAC",4,60.8,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A18E Y35H G51M R136T",4
"lib2","SARS-CoV-2","ATACTTAATAGTACAG",21,136.13,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F47M T63C V103S R136V Y159S Q163V F167A",7
"lib2","SARS-CoV-2","ATACTTAATGATTTAT",4,21.34,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","F17E S43I P82R V180S",4
"lib2","SARS-CoV-2","ATACTTAATGCGAACC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R P96V F160G R179L",4
"lib2","SARS-CoV-2","ATACTTAATTCTAATG",2,16.25,6.21,-4.62,0.4,1.74,1.04,0.01,">1 nonsynonymous","D137L L183F",2
"lib2","SARS-CoV-2","ATACTTACGCAGATAA",7,65.17,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","E135R P161T",2
"lib2","SARS-CoV-2","ATACTTACGCGTTTCA",3,106.42,10.15,-0.69,0.06,2.84,1.04,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","ATACTTAGACTCGCCG",4,0,NA,NA,NA,NA,NA,NA,"stop","C31* K48N P96W",3
"lib2","SARS-CoV-2","ATACTTAGATACTACG",1,5.74,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","S36L L131R S147C V181I T201P",5
"lib2","SARS-CoV-2","ATACTTAGGCTTTCGA",1,35.76,10.79,-0.05,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTTAGTAACCCCA",7,54.52,8.27,-2.57,0.16,2.15,1.11,0.01,">1 nonsynonymous","N120R S139H G155P",3
"lib2","SARS-CoV-2","ATACTTAGTGGTACCC",9,257.37,10.79,-0.05,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTTAGTTGGTCTG",1,6.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T N157V Q176S T201R",4
"lib2","SARS-CoV-2","ATACTTATAGCGAGAT",3,82.33,8.74,-2.1,0.08,2.92,1.09,0,">1 nonsynonymous","R27T A81R F126K",3
"lib2","SARS-CoV-2","ATACTTATCATCTCAG",3,10.6,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","L38A T100D I138R",3
"lib2","SARS-CoV-2","ATACTTATCCTAACTG",4,0.22,NA,NA,NA,NA,NA,NA,"stop","F12* A33G F44K D90F F99E K199E",6
"lib2","SARS-CoV-2","ATACTTATGAGAGAAC",4,49.7,10.32,-0.52,0.06,2.87,1.04,0,">1 nonsynonymous","D90W I104L",2
"lib2","SARS-CoV-2","ATACTTATTGCGACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F C61N K114D",3
"lib2","SARS-CoV-2","ATACTTATTGTTAACA",4,19.57,6.23,-4.6,0.76,1.5,1.12,0.02,">1 nonsynonymous","N30M R127L",2
"lib2","SARS-CoV-2","ATACTTCAAAAGTAAT",5,84.58,10.78,-0.05,0.06,2.84,1.17,0,"1 nonsynonymous","K199T",1
"lib2","SARS-CoV-2","ATACTTCAACTAAGTA",4,8.95,8.2,-2.64,0.26,1.5,1,0.07,">1 nonsynonymous","T15S V65R S139Y K198G",4
"lib2","SARS-CoV-2","ATACTTCAAGTTGCAC",1,48.15,10.57,-0.27,0.05,2.92,1.05,0,">1 nonsynonymous","P7R T63Q Q84K L188T",4
"lib2","SARS-CoV-2","ATACTTCAATTCCATT",7,44.85,6,-4.84,1.02,3,1.14,0.01,">1 nonsynonymous","C6G L162Q",2
"lib2","SARS-CoV-2","ATACTTCACGATATCG",14,61.62,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","S19W Y66Q L95Q T100S C150M P191T T201L",7
"lib2","SARS-CoV-2","ATACTTCATCTGAACG",7,56.7,10.94,0.11,0.05,2.97,1.04,0,"1 nonsynonymous","R16D",1
"lib2","SARS-CoV-2","ATACTTCCAGATTAAA",12,72.94,7.86,-2.97,0.2,1.5,1.05,0.01,">1 nonsynonymous","S45F V77F F156L",3
"lib2","SARS-CoV-2","ATACTTCCAGTGAAAC",3,47.87,10.89,0.05,0.06,2.99,1,0,">1 nonsynonymous","T55F P197V",2
"lib2","SARS-CoV-2","ATACTTCGATGAAGCA",3,0.95,NA,NA,NA,NA,NA,NA,"stop","V37S C61L G74C V103E N157* S184A",6
"lib2","SARS-CoV-2","ATACTTCTATTAAGGC",8,159.08,8.32,-2.52,0.11,2.31,1.1,0,">1 nonsynonymous","G83C Y119K P177S",3
"lib2","SARS-CoV-2","ATACTTCTCATCTAAC",5,74.25,10.76,-0.08,0.05,2.94,1.09,0,"1 nonsynonymous","K198I",1
"lib2","SARS-CoV-2","ATACTTCTGCTATTAT",10,2.03,NA,NA,NA,NA,NA,NA,"stop","C6I K56* V103Y K114R R136T",5
"lib2","SARS-CoV-2","ATACTTCTTTTATATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A G152N F167L",3
"lib2","SARS-CoV-2","ATACTTGAACCATAGG",2,17.76,10.51,-0.32,0.07,2.93,1.04,0,">1 nonsynonymous","N13Y S129T",2
"lib2","SARS-CoV-2","ATACTTGACGCTAGAA",3,26.61,9.21,-1.62,0.06,3,1.04,0,">1 nonsynonymous","G9A G117T",2
"lib2","SARS-CoV-2","ATACTTGGTCCACGAC",1,11,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6L W23K",2
"lib2","SARS-CoV-2","ATACTTGGTTCTAGTA",15,181.68,10.82,-0.02,0.05,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATACTTGTAAGCGGGC",5,38.01,10.82,-0.01,0.05,3,1.03,0,">1 nonsynonymous","T55Y N130V",2
"lib2","SARS-CoV-2","ATACTTGTAATGAACG",2,13.9,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","N4S A33Q A42W L60M A105L",5
"lib2","SARS-CoV-2","ATACTTGTAGGGACTG",2,10.61,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","N4G T85S V103W L122Q",4
"lib2","SARS-CoV-2","ATACTTTAACGAATCA",5,163.51,10.59,-0.25,0.03,2.95,1.06,0,">1 nonsynonymous","V32E I104L",2
"lib2","SARS-CoV-2","ATACTTTAATAGAACA",2,14.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T55L V103L Y119F L188M",4
"lib2","SARS-CoV-2","ATACTTTATACCAGTA",8,220.35,8.41,-2.43,0.12,2.91,1.08,0.01,">1 nonsynonymous","K56L C61E L125A G146E",4
"lib2","SARS-CoV-2","ATACTTTATAGTTTTA",4,78.95,10.64,-0.2,0.04,2.94,1.06,0,">1 nonsynonymous","L122V P133A F160Q",3
"lib2","SARS-CoV-2","ATACTTTATCCTTAAT",3,30.41,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28Q V37S C49F D68V Y121V",5
"lib2","SARS-CoV-2","ATACTTTCAACCGTAC",5,59.85,10.69,-0.15,0.06,2.82,1.14,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","ATACTTTCAATAAGTT",4,46.89,8.92,-1.92,0.07,2.89,1.13,0,">1 nonsynonymous","S41D T100F S129I Q168L",4
"lib2","SARS-CoV-2","ATACTTTCCGTTGATG",2,64.17,10.81,-0.02,0.03,2.98,1.03,0,"1 nonsynonymous","S43P",1
"lib2","SARS-CoV-2","ATACTTTCGAGGTCTT",6,198.77,10.14,-0.7,0.03,2.79,1.1,0,"1 nonsynonymous","T15C",1
"lib2","SARS-CoV-2","ATACTTTCGCAAGCTT",7,54.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L57V R78A G101Q I138L G166S F185V",6
"lib2","SARS-CoV-2","ATACTTTGAAAGACAC",11,11.6,NA,NA,NA,NA,NA,NA,"stop","S69* Q84C I138L",3
"lib2","SARS-CoV-2","ATACTTTTATTTTACA",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G A42W A105L",3
"lib2","SARS-CoV-2","ATACTTTTCTACTCAC",3,63.48,10.51,-0.32,0.04,2.99,1.01,0,">1 nonsynonymous","I28L F44A",2
"lib2","SARS-CoV-2","ATACTTTTGATTAGAA",4,48.47,8.93,-1.91,0.06,2.99,1.07,0,"1 nonsynonymous","N157H",1
"lib2","SARS-CoV-2","ATACTTTTGTGCCGCA",2,49.88,10.86,0.02,0.07,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATACTTTTTAGCACCG",1,6.32,10.69,-0.15,0.08,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATACTTTTTGAATCAC",8,118.53,10.27,-0.56,0.04,2.95,1.05,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","ATAGAAAAAAACCCTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R R124S",2
"lib2","SARS-CoV-2","ATAGAAAAAGCGCGAA",4,54.62,9.86,-0.97,0.05,2.89,1.03,0,">1 nonsynonymous","N40T G155C S200P",3
"lib2","SARS-CoV-2","ATAGAAAAAGTCCACC",5,22.71,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F8S L183K",2
"lib2","SARS-CoV-2","ATAGAAAAATAAGGAA",8,93.34,10.01,-0.83,0.03,2.97,1.02,0,">1 nonsynonymous","Y35L N118H",2
"lib2","SARS-CoV-2","ATAGAAAACAACGAAG",6,30.16,9.75,-1.08,0.36,1.5,1,0.07,">1 nonsynonymous","I28E S53G",2
"lib2","SARS-CoV-2","ATAGAAAACGAAGTGT",3,5.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F G146F S200T",3
"lib2","SARS-CoV-2","ATAGAAAACTACAAGG",1,8.15,10.64,-0.2,0.09,3,1,0,">1 nonsynonymous","G83L N120Q",2
"lib2","SARS-CoV-2","ATAGAAAAGAATATTA",8,85.83,10.21,-0.63,0.04,2.76,1.05,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","ATAGAAAAGCAGTGCA",9,102.45,10.86,0.03,0.05,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATAGAAAAGCCAAACC",9,132.28,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E76Y R127N Q176L",3
"lib2","SARS-CoV-2","ATAGAAAATACATGTG",2,0.65,NA,NA,NA,NA,NA,NA,"stop","N64H Y91*",2
"lib2","SARS-CoV-2","ATAGAAACACTCGTCG",1,45.05,10.87,0.04,0.05,2.96,1.06,0,"1 nonsynonymous","S200E",1
"lib2","SARS-CoV-2","ATAGAAACATAAACAC",4,87.69,9.55,-1.29,0.07,2.12,1.04,0,">1 nonsynonymous","L60S Q84H V153S S164F",4
"lib2","SARS-CoV-2","ATAGAAACCCTGGCGT",4,25.05,9.48,-1.36,0.11,2.38,1.05,0.01,">1 nonsynonymous","S36N R136E T201S",3
"lib2","SARS-CoV-2","ATAGAAACCGGTCGTT",2,35.53,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","F167D",1
"lib2","SARS-CoV-2","ATAGAAACCTTGTCGG",2,20.29,11.04,0.2,0.08,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGAAACGGTACACA",1,30.85,7.37,-3.47,0.41,1.5,1.22,0.06,">1 nonsynonymous","N4S S41C P177C",3
"lib2","SARS-CoV-2","ATAGAAACTGACCAAA",2,3.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A18L",1
"lib2","SARS-CoV-2","ATAGAAACTTAACCCG",8,85.07,6,-4.84,1.09,1.5,1.15,0.01,">1 nonsynonymous","F44I N64I D98K N157I",4
"lib2","SARS-CoV-2","ATAGAAAGAATTTAAA",11,68.16,8.99,-1.84,0.24,1.5,1.02,0.02,">1 nonsynonymous","K48D P82R",2
"lib2","SARS-CoV-2","ATAGAAAGATTTTAAG",10,123.67,10.84,0,0.04,2.9,1.09,0,">1 nonsynonymous","I2Y P197Q",2
"lib2","SARS-CoV-2","ATAGAAAGCCATACCT",2,16.17,10.78,-0.05,0.06,2.99,1.03,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","ATAGAAAGGATAGTAA",5,2.9,NA,NA,NA,NA,NA,NA,"stop","W23* I28K V37T P149Q V182W",5
"lib2","SARS-CoV-2","ATAGAAAGTGATTGTT",1,15.23,8.01,-2.83,0.24,2.16,1.08,0.01,">1 nonsynonymous","L60R N120I G146Q",3
"lib2","SARS-CoV-2","ATAGAAATACAAGTGA",19,149.5,10.55,-0.29,0.04,2.94,1.03,0,">1 nonsynonymous","P54V L183F",2
"lib2","SARS-CoV-2","ATAGAAATCACCCTAT",11,80.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1L A67I Y93S A190C",4
"lib2","SARS-CoV-2","ATAGAAATCGCCGCAA",7,181.65,6,-4.84,0.78,1.5,1.14,0,">1 nonsynonymous","L38F T55A Y143I P177K",4
"lib2","SARS-CoV-2","ATAGAAATGCTCCTTA",3,56.15,8.5,-2.34,0.13,2.01,1.06,0.01,">1 nonsynonymous","T55S F62R I142S K199H",4
"lib2","SARS-CoV-2","ATAGAAATTAAAAACT",2,19.47,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10L Y50S D59T D97Y",4
"lib2","SARS-CoV-2","ATAGAAATTTGTTCTC",8,114.86,10.85,0.01,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGAAATTTTTTGCT",3,78.89,10.39,-0.44,0.06,2.89,1.1,0,">1 nonsynonymous","F47I N110I",2
"lib2","SARS-CoV-2","ATAGAACAAGTTGGCT",6,35.6,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F47Y V71Q D90Y",3
"lib2","SARS-CoV-2","ATAGAACATGCGTAAT",4,95.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6I R25P Q163C",3
"lib2","SARS-CoV-2","ATAGAACCAATAATTT",17,172.19,10,-0.84,0.08,2.3,1.02,0,"1 nonsynonymous","F17P",1
"lib2","SARS-CoV-2","ATAGAACCAATGGGAT",2,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R D98A V180G",3
"lib2","SARS-CoV-2","ATAGAACCATACTCCG",2,20.08,9.64,-1.2,0.08,2.74,1.05,0,">1 nonsynonymous","N118V N151Q",2
"lib2","SARS-CoV-2","ATAGAACCCCTCAACA",5,62.25,6.67,-4.17,0.42,1.5,1.22,0.02,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","ATAGAACCGAAAACCT",2,30.56,10.71,-0.12,0.03,3,1,0,">1 nonsynonymous","N130D S147R",2
"lib2","SARS-CoV-2","ATAGAACGGTTTAAAC",3,88.57,8.29,-2.55,0.14,2.05,1.08,0.01,"1 nonsynonymous","Q176I",1
"lib2","SARS-CoV-2","ATAGAACGTGGAATAA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","R16S V52* Y91M",3
"lib2","SARS-CoV-2","ATAGAACGTTAATTAA",8,81.01,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5Q Q144P P161L G174D",4
"lib2","SARS-CoV-2","ATAGAACTACTACCAG",3,45.3,9.28,-1.56,0.13,1.57,1.06,0.01,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","ATAGAACTCGATTGCT",2,22.14,10.8,-0.04,0.04,3,1.01,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","ATAGAACTGAAACAAC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N30R D90V D97* G116S S129V L162K",6
"lib2","SARS-CoV-2","ATAGAACTTGAAGCAG",8,123.03,10.85,0.02,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGAAGAAACAGGCG",3,11.32,8.14,-2.69,0.35,1.5,1.12,0.05,">1 nonsynonymous","A33S F70M Y119Q A190P",4
"lib2","SARS-CoV-2","ATAGAAGAACAAAAAC",14,64.27,9.5,-1.34,0.14,1.97,1.07,0.01,">1 nonsynonymous","C6F F99Y",2
"lib2","SARS-CoV-2","ATAGAAGAGGACTACA",3,32.57,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G9R A18E I28V C49I P149S",5
"lib2","SARS-CoV-2","ATAGAAGAGTACTTAA",16,122.13,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51L V65M K87L S139P Y175V",5
"lib2","SARS-CoV-2","ATAGAAGCCATTCCAG",6,0.92,NA,NA,NA,NA,NA,NA,"stop","N64* D97* F134P",3
"lib2","SARS-CoV-2","ATAGAAGCCTTCAGAA",4,0.15,NA,NA,NA,NA,NA,NA,"stop","S45T P82Y Q168* R179L",4
"lib2","SARS-CoV-2","ATAGAAGCTACAATTC",10,183.17,10.75,-0.09,0.06,2.94,1.07,0,">1 nonsynonymous","D59E Y66L",2
"lib2","SARS-CoV-2","ATAGAAGCTCTCTGGT",2,42.49,10.48,-0.36,0.05,2.92,1.05,0,"1 nonsynonymous","A81K",1
"lib2","SARS-CoV-2","ATAGAAGCTTCAATAA",10,144.71,8.27,-2.56,0.08,2.18,1.05,0,">1 nonsynonymous","N64L K87F S113V",3
"lib2","SARS-CoV-2","ATAGAAGGAAACTCAT",1,32.74,10.6,-0.24,0.04,2.98,1.04,0,">1 nonsynonymous","D97S F160T",2
"lib2","SARS-CoV-2","ATAGAAGGTAGACAGG",3,73.47,10.42,-0.42,0.05,2.91,1.09,0,">1 nonsynonymous","T3Q T170S",2
"lib2","SARS-CoV-2","ATAGAATAAAGAACTA",16,142.26,10.29,-0.55,0.03,2.91,1.05,0,"1 nonsynonymous","A14H",1
"lib2","SARS-CoV-2","ATAGAATAGTGTCATA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","D90* F99K",2
"lib2","SARS-CoV-2","ATAGAATCAATATATT",3,8.72,8.28,-2.55,0.25,2.53,1.11,0.01,">1 nonsynonymous","I138F G146N T201R",3
"lib2","SARS-CoV-2","ATAGAATCCATTTTTG",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144T G152L",2
"lib2","SARS-CoV-2","ATAGAATCGGTTGCAA",16,257.23,10.78,-0.06,0.03,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGAATGCCACACAG",5,54.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D68K P149L",2
"lib2","SARS-CoV-2","ATAGAATGTCTTAATA",11,176.77,10.47,-0.37,0.04,2.86,1.06,0,">1 nonsynonymous","N4V A14S",2
"lib2","SARS-CoV-2","ATAGAATTAAAATCTA",2,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S V103L S139L Q163K",4
"lib2","SARS-CoV-2","ATAGAATTACCACGAA",4,38.76,10.13,-0.71,0.09,2.69,1.04,0,">1 nonsynonymous","P7Y V37N K56V",3
"lib2","SARS-CoV-2","ATAGAATTATTAGATT",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R W106K S139P",3
"lib2","SARS-CoV-2","ATAGACAAAAATCCCT",4,29.88,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","C6I K94E",2
"lib2","SARS-CoV-2","ATAGACAAAACAAGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14D T46F L60H G101N V182I S184*",6
"lib2","SARS-CoV-2","ATAGACAAGCAATAAA",3,78.03,10.42,-0.41,0.06,2.94,1.04,0,"1 nonsynonymous","N24I",1
"lib2","SARS-CoV-2","ATAGACACACAAGAAA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W D97E",2
"lib2","SARS-CoV-2","ATAGACACATATTCCA",3,13.71,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","C6G T46K G51I Y119G E141S T148W F167W",7
"lib2","SARS-CoV-2","ATAGACAGAACCTCCC",6,112.7,6,-4.84,1.35,1.5,1.09,0,">1 nonsynonymous","S36L S41C A105K N151Q",4
"lib2","SARS-CoV-2","ATAGACAGAATCTATT",3,8.28,6.47,-4.36,0.45,2.02,1.11,0.02,">1 nonsynonymous","N4M N40Y W106T Q144S S200L",5
"lib2","SARS-CoV-2","ATAGACAGCATTTACG",14,125.46,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K26V T55L G83A D112L F126S",5
"lib2","SARS-CoV-2","ATAGACATAAAAATTC",4,2.44,NA,NA,NA,NA,NA,NA,"stop","F17V R25Q C150* E154P P169H",5
"lib2","SARS-CoV-2","ATAGACATTAATAAAA",2,37.59,9.98,-0.85,0.07,2.82,1.04,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","ATAGACATTATAATAA",8,0.63,NA,NA,NA,NA,NA,NA,"stop","C61S A81L K94*",3
"lib2","SARS-CoV-2","ATAGACCAATAGACAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","S41G C49* P54S F160L",4
"lib2","SARS-CoV-2","ATAGACCACAACTAAT",1,24.52,10.62,-0.22,0.05,2.97,1.02,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","ATAGACCATAAAGTCG",2,35.14,9.6,-1.24,0.04,2.94,1.02,0,">1 nonsynonymous","N40F G174E L188M K198A",4
"lib2","SARS-CoV-2","ATAGACCATGGAAAAA",4,27.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10G C49V N120T",3
"lib2","SARS-CoV-2","ATAGACCCACACGTAA",9,85.05,10.89,0.06,0.05,2.84,1.17,0,"1 nonsynonymous","S29H",1
"lib2","SARS-CoV-2","ATAGACCCATGAAGTG",3,0.94,NA,NA,NA,NA,NA,NA,"stop","V20* S45V",2
"lib2","SARS-CoV-2","ATAGACCCCAGGCAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P Y35N D97G",3
"lib2","SARS-CoV-2","ATAGACCCTCCAGTAA",2,37.44,9.16,-1.68,0.06,2.97,1.07,0,"1 nonsynonymous","G166R",1
"lib2","SARS-CoV-2","ATAGACCGAAATAGCC",6,94.52,10.54,-0.29,0.04,2.88,1.06,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","ATAGACCGCCAGTCTG",1,14.78,10.15,-0.68,0.1,2.42,1.07,0.01,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","ATAGACCTATTACCAT",7,99.65,9.54,-1.3,0.05,2.94,1.04,0,">1 nonsynonymous","K56Y S129G F156P G174L",4
"lib2","SARS-CoV-2","ATAGACCTGAAATATG",4,59.44,6,-4.84,1.48,1.5,1.12,0.02,">1 nonsynonymous","N64G S69E G152V F167H",4
"lib2","SARS-CoV-2","ATAGACCTGAGCCCCG",4,10.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41L Y93A W106R Y165N P169H",5
"lib2","SARS-CoV-2","ATAGACCTTGTCACGT",1,0,NA,NA,NA,NA,NA,NA,"stop","V65* P149G",2
"lib2","SARS-CoV-2","ATAGACCTTTAATACT",2,7.38,6,-4.84,2,3,1.1,0,">1 nonsynonymous","W23L F99V",2
"lib2","SARS-CoV-2","ATAGACGAAAGCTGAA",9,2.01,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATAGACGAAATACCGA",12,121.93,9.83,-1,0.08,2.33,1.03,0,">1 nonsynonymous","S41M T100G",2
"lib2","SARS-CoV-2","ATAGACGAAATGCAAA",5,25.64,10.85,0.01,0.06,2.91,1.09,0,"1 nonsynonymous","F62T",1
"lib2","SARS-CoV-2","ATAGACGAAGTGCATA",4,42.98,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","D90K R136G N157Q",3
"lib2","SARS-CoV-2","ATAGACGATTAATGAT",11,208.42,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44N Y91L T100S P161A P177F",5
"lib2","SARS-CoV-2","ATAGACGCTCTAATAA",4,50.91,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6R R73V V182C C195M",4
"lib2","SARS-CoV-2","ATAGACGTCCACGAGA",1,2.66,NA,NA,NA,NA,NA,NA,"stop","N4V S19L L60* N120P",4
"lib2","SARS-CoV-2","ATAGACGTGCTTGGCA",10,162.8,9.84,-1,0.07,2.17,1.06,0,">1 nonsynonymous","V11N P197T",2
"lib2","SARS-CoV-2","ATAGACTAATCCCTAT",3,13.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4C K87Q R127F G146W",4
"lib2","SARS-CoV-2","ATAGACTAGACGCAAA",3,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M G9Y Q144L",3
"lib2","SARS-CoV-2","ATAGACTAGCTCCGGC",2,45.21,10.05,-0.78,0.07,2.67,1.1,0,">1 nonsynonymous","F44E F62T",2
"lib2","SARS-CoV-2","ATAGACTAGGACCTAC",8,181.56,10.76,-0.08,0.05,2.88,1.13,0,">1 nonsynonymous","D90Q N120S",2
"lib2","SARS-CoV-2","ATAGACTAGGCCCTAG",12,150.56,10.83,-0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGACTATCATATCT",13,99.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64K R136G A145L F156T G172Q",5
"lib2","SARS-CoV-2","ATAGACTCAATTGAAA",7,0.49,NA,NA,NA,NA,NA,NA,"stop","A14R A33V Y159*",3
"lib2","SARS-CoV-2","ATAGACTCACAAGTAC",2,22.72,10.86,0.03,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGACTCGTCCGTTT",7,39.64,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F12S Q84P E154N",3
"lib2","SARS-CoV-2","ATAGACTGAAGATCAA",3,0.69,NA,NA,NA,NA,NA,NA,"stop","F17L S29K Y91* D137M",4
"lib2","SARS-CoV-2","ATAGACTGGCTGCCTG",3,14.84,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","N64C D90S W106K L125S F134L N151K",6
"lib2","SARS-CoV-2","ATAGACTGGGAACATG",5,14.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41K T85D Y93S P133Q",4
"lib2","SARS-CoV-2","ATAGACTGGGCGACAA",5,95.22,9.74,-1.09,0.05,2.38,1.02,0,">1 nonsynonymous","A33K K56Y",2
"lib2","SARS-CoV-2","ATAGACTGGGCTAGAT",6,30.03,6.91,-3.93,0.54,1.5,1.14,0.06,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ATAGACTGTGATACAA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","R16T I88T G117A G174D L183*",5
"lib2","SARS-CoV-2","ATAGACTTAGGCTATA",1,23.4,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V20Y S36M R127K",3
"lib2","SARS-CoV-2","ATAGACTTATCAGCAT",7,140.92,10.06,-0.78,0.04,2.85,1.04,0,">1 nonsynonymous","T15L S43C F160M",3
"lib2","SARS-CoV-2","ATAGACTTTTCTTGAA",5,144.32,9.65,-1.18,0.06,2.09,1.03,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","ATAGAGAAAAACCGGG",1,52.45,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V32L W106V Y119P S139T F160S F167M",6
"lib2","SARS-CoV-2","ATAGAGAACCACGGTA",7,42.22,10.72,-0.11,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGAGAAGAAAGGAA",7,1.33,NA,NA,NA,NA,NA,NA,"stop","D68* K94A G117N E141V C158Y",5
"lib2","SARS-CoV-2","ATAGAGAAGAATCAAC",12,227.56,9.69,-1.15,0.06,2.54,1.03,0,">1 nonsynonymous","G51T K56L G174A T201P",4
"lib2","SARS-CoV-2","ATAGAGACCTCAACTG",1,27.71,8.06,-2.77,0.4,1.63,1.19,0.07,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","ATAGAGAGATTCCTGA",1,0.18,NA,NA,NA,NA,NA,NA,"stop","Y21L Y121D R136*",3
"lib2","SARS-CoV-2","ATAGAGAGTTAGGTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","F99I Y143*",2
"lib2","SARS-CoV-2","ATAGAGAGTTCATACG",1,8.1,10.45,-0.39,0.17,2.96,1,0.01,">1 nonsynonymous","G9L L131V",2
"lib2","SARS-CoV-2","ATAGAGATAGAGACAT",4,15.34,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L60V G74L A81R",3
"lib2","SARS-CoV-2","ATAGAGATTATCCACA",6,165.52,10.63,-0.2,0.04,2.91,1.07,0,"1 nonsynonymous","E10P",1
"lib2","SARS-CoV-2","ATAGAGATTTTGCATT",4,15.84,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y93P W106D",2
"lib2","SARS-CoV-2","ATAGAGCAATTACACA",1,46.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S W23N L95M Y123K I142L",5
"lib2","SARS-CoV-2","ATAGAGCACTGAAGCG",7,104.33,10.38,-0.45,0.05,2.89,1.12,0,">1 nonsynonymous","N4M F156R",2
"lib2","SARS-CoV-2","ATAGAGCATATTTTCC",16,165.82,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35T I104M R127E",3
"lib2","SARS-CoV-2","ATAGAGCGCTATACAT",4,66.94,7.31,-3.52,0.26,1.5,1.11,0.02,">1 nonsynonymous","K48S Y91L D112E L187C T201M",5
"lib2","SARS-CoV-2","ATAGAGCTAATTTATG",3,5.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31Y P96F V115C P161S",4
"lib2","SARS-CoV-2","ATAGAGCTATATGTCT",3,73.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37I P161R Q168A",3
"lib2","SARS-CoV-2","ATAGAGGACCCAGACG",2,52.77,8.25,-2.58,0.14,1.5,1.02,0.01,">1 nonsynonymous","E10V A22C G155V",3
"lib2","SARS-CoV-2","ATAGAGGAGTATAATT",2,7.63,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","P149K C158Y",2
"lib2","SARS-CoV-2","ATAGAGGCGGACACTA",5,19.02,6,-4.84,2,3,1.05,0,">1 nonsynonymous","W23N V115L G116E E135Q K199C",5
"lib2","SARS-CoV-2","ATAGAGGCGGCTTAGG",6,30.99,6.21,-4.63,1.27,1.5,1.34,0.04,">1 nonsynonymous","I104D S139N F167V",3
"lib2","SARS-CoV-2","ATAGAGGGAACCGGCC",6,87.08,9.41,-1.43,0.07,1.87,1.03,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","ATAGAGTAGAACGTAA",8,36.5,6,-4.84,1.52,3,1.21,0.02,">1 nonsynonymous","S41E N64S V71E I88S P161I E186S",6
"lib2","SARS-CoV-2","ATAGAGTCATAGGAAA",9,93.99,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N24I S53I P133I Y165T",4
"lib2","SARS-CoV-2","ATAGAGTCCAGCCCAG",23,212.16,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2L V20Q S29V N40Y Y91V T100N Q168L A190S",8
"lib2","SARS-CoV-2","ATAGAGTCGATCTTGT",7,0,NA,NA,NA,NA,NA,NA,"stop","A42L C150*",2
"lib2","SARS-CoV-2","ATAGAGTCGTCTCCCC",12,39.93,10.53,-0.31,0.17,2.23,1.08,0.01,">1 nonsynonymous","F8W S36V Y178S",3
"lib2","SARS-CoV-2","ATAGAGTCTCAATACC",14,72.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N64L Q84P D97G P161L S184T",5
"lib2","SARS-CoV-2","ATAGAGTGCCAAGACG",5,3.05,NA,NA,NA,NA,NA,NA,"stop","S53L T100* P133F S200L",4
"lib2","SARS-CoV-2","ATAGAGTTATGTGAAC",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I D98Y N107T L162P V173F",5
"lib2","SARS-CoV-2","ATAGATAACTAGCGAG",3,13.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6P G86N A105H I138R G146Y",5
"lib2","SARS-CoV-2","ATAGATAAGATACTGC",16,280.66,8.26,-2.58,0.14,1.96,1.13,0.01,">1 nonsynonymous","S41L K94R G117T T140N",4
"lib2","SARS-CoV-2","ATAGATAATGAATCGC",6,223.21,10.84,0.01,0.04,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGATAATTCAAATC",6,56.09,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V103F G166A",2
"lib2","SARS-CoV-2","ATAGATACCGGTAACG",7,5.01,NA,NA,NA,NA,NA,NA,"stop","L5F S36* D68W T85H D90N N130G",6
"lib2","SARS-CoV-2","ATAGATAGCAACCTAG",6,13.53,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","P82R D97C P161W S200T",4
"lib2","SARS-CoV-2","ATAGATATAAAAAAGT",1,53.6,10.24,-0.59,0.05,2.85,1.15,0,">1 nonsynonymous","K87L T100K E141Y",3
"lib2","SARS-CoV-2","ATAGATATATTAAGAC",3,26.35,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F12T L38Q Y91L I142K",4
"lib2","SARS-CoV-2","ATAGATATTCACTACT",2,15.03,6,-4.84,0.46,3,1.07,0.01,">1 nonsynonymous","T55I G86W",2
"lib2","SARS-CoV-2","ATAGATATTGAGCAAA",2,17.01,10.74,-0.09,0.07,2.88,1.14,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","ATAGATATTTGTCCTA",3,14.05,10.3,-0.54,0.07,2.83,1.04,0,">1 nonsynonymous","V52L Y123C",2
"lib2","SARS-CoV-2","ATAGATCACGTCGAAC",5,113.91,10.63,-0.21,0.03,2.95,1.05,0,">1 nonsynonymous","D59Y N110F",2
"lib2","SARS-CoV-2","ATAGATCATGTGTCCT",22,115.91,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F12C C49A T148V",3
"lib2","SARS-CoV-2","ATAGATCCAAAGGATA",8,6.38,NA,NA,NA,NA,NA,NA,"stop","N40Y K94V T100C G174*",4
"lib2","SARS-CoV-2","ATAGATCCAACATGGT",8,77.09,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A14T Y50L A105C V173D Y178T",5
"lib2","SARS-CoV-2","ATAGATCCAACGACCG",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N T55G K87N D137R C150T",5
"lib2","SARS-CoV-2","ATAGATCCGGCACCTA",6,34.21,6.9,-3.94,0.29,1.5,1.19,0.01,">1 nonsynonymous","G9V S129P R136T E154I",4
"lib2","SARS-CoV-2","ATAGATCCTCCAAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","ATAGATCGATGTCTAT",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S G86L C102S Y121N",4
"lib2","SARS-CoV-2","ATAGATCGCTACCACT",1,5.97,10.71,-0.12,0.19,2.72,1.25,0.01,"1 nonsynonymous","S139E",1
"lib2","SARS-CoV-2","ATAGATCGCTGCTTAT",8,40.62,8.24,-2.59,0.2,1.5,1.08,0.02,">1 nonsynonymous","C6F T55P N107G",3
"lib2","SARS-CoV-2","ATAGATCTGCTAACAG",2,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73V D137L",2
"lib2","SARS-CoV-2","ATAGATCTTACCCAAT",6,64.9,10.79,-0.04,0.03,2.89,1.1,0,">1 nonsynonymous","P191Y P197A",2
"lib2","SARS-CoV-2","ATAGATGAAGCTAAAT",5,18.31,9.42,-1.42,0.26,1.9,1,0.03,">1 nonsynonymous","N24W A89G",2
"lib2","SARS-CoV-2","ATAGATGACACCTTCC",1,12.67,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","F44Y G86V A89G",3
"lib2","SARS-CoV-2","ATAGATGAGAGCAACG",2,35.1,9.22,-1.62,0.05,2.86,1.13,0,">1 nonsynonymous","T100C Y119M",2
"lib2","SARS-CoV-2","ATAGATGAGAGGCTAA",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E T100D F126Y",3
"lib2","SARS-CoV-2","ATAGATGCGTTCCATC",6,42.14,6.77,-4.06,0.25,1.58,1.13,0.02,">1 nonsynonymous","T63R K94V N118Y",3
"lib2","SARS-CoV-2","ATAGATGGCACACCTA",7,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S K198P",2
"lib2","SARS-CoV-2","ATAGATGGTGATCCTG",1,287.98,8.52,-2.32,0.08,1.5,1.06,0,"1 nonsynonymous","R127D",1
"lib2","SARS-CoV-2","ATAGATGTATTACTCG",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56V G86R C158S Q163H",4
"lib2","SARS-CoV-2","ATAGATTAAAACTCAT",4,36.45,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N58H S113P E141T K198L",4
"lib2","SARS-CoV-2","ATAGATTAATTATCAT",1,13.26,10.35,-0.48,0.07,3,1.01,0,"1 nonsynonymous","Q168M",1
"lib2","SARS-CoV-2","ATAGATTAATTGCTTT",6,8.75,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G101L P149S V173C",3
"lib2","SARS-CoV-2","ATAGATTACGTGCGCG",4,111.01,10.82,-0.02,0.04,2.9,1.1,0,"1 nonsynonymous","S41E",1
"lib2","SARS-CoV-2","ATAGATTATACATGGA",4,36.74,8.67,-2.17,0.18,2.02,1.09,0.01,">1 nonsynonymous","W106E F156S",2
"lib2","SARS-CoV-2","ATAGATTATATACTAT",10,132.58,10.83,-0.01,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGATTGGATGATGT",2,16.45,6.51,-4.32,0.76,1.5,1.23,0.05,">1 nonsynonymous","G9L D68N P197E",3
"lib2","SARS-CoV-2","ATAGATTTAGTTAAAT",2,46.58,8.25,-2.59,0.17,1.88,1.08,0.01,">1 nonsynonymous","L38Q R78E D90M N120E S147G A190H K199S",7
"lib2","SARS-CoV-2","ATAGATTTGGCTCGGG",6,103.35,10.84,0.01,0.04,2.93,1.08,0,">1 nonsynonymous","T63R T85R",2
"lib2","SARS-CoV-2","ATAGATTTTCATTAAA",4,38.37,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","I2F F17I K56I D75G G152Q",5
"lib2","SARS-CoV-2","ATAGATTTTGAAAACC",5,112.31,8.59,-2.25,0.1,2.74,1.05,0,">1 nonsynonymous","T85F Y119L N130V P149S",4
"lib2","SARS-CoV-2","ATAGCAAAATCATCTA",7,101.23,10.68,-0.16,0.03,2.96,1.05,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","ATAGCAAATGGTCAAG",9,30.06,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","E10N V20G S113C Q168F",4
"lib2","SARS-CoV-2","ATAGCAAATTCTTTAA",8,74.31,9.43,-1.41,0.05,1.91,1.05,0,">1 nonsynonymous","P7W K56L K114N N171C",4
"lib2","SARS-CoV-2","ATAGCAACAAATCATC",1,17,9.97,-0.87,0.12,2.32,1.07,0.01,">1 nonsynonymous","C49W L57F",2
"lib2","SARS-CoV-2","ATAGCAAGCATTAAGG",6,132.42,9.45,-1.39,0.06,1.92,1.08,0,">1 nonsynonymous","I2Y Q79S T100A",3
"lib2","SARS-CoV-2","ATAGCAATCCATTGAT",5,58.44,10.81,-0.03,0.07,2.88,1.13,0,"1 nonsynonymous","N1Q",1
"lib2","SARS-CoV-2","ATAGCAATTCCCTGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19G G83Y D137Y E186L",4
"lib2","SARS-CoV-2","ATAGCACAAAAAGACA",5,84.5,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N24I A33E K94E Y119V",4
"lib2","SARS-CoV-2","ATAGCACAAATTGCCT",4,26.38,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N4V I28T S53T K94F G152A",5
"lib2","SARS-CoV-2","ATAGCACACAAACGAA",4,47.18,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","P7I F44C C49Y T148I",4
"lib2","SARS-CoV-2","ATAGCACACACAATAC",1,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V I28K C49R D98C T170S",5
"lib2","SARS-CoV-2","ATAGCACACCTAAACC",7,2.04,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib2","SARS-CoV-2","ATAGCACATATAATGG",10,78.32,6,-4.84,1.59,1.5,1.23,0.02,">1 nonsynonymous","C49I C61T A67S I88N L131Y A190P",6
"lib2","SARS-CoV-2","ATAGCACCCGCTGAAA",9,177.81,10.44,-0.39,0.04,2.93,1.04,0,"1 nonsynonymous","F62D",1
"lib2","SARS-CoV-2","ATAGCACGTTAATTCG",5,37.24,10.78,-0.05,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGCACTATAACTTA",7,78.33,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A81L I88E N120L",3
"lib2","SARS-CoV-2","ATAGCACTCTCGAACA",7,53.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A18L C31K A105M",3
"lib2","SARS-CoV-2","ATAGCACTTCACAAAC",6,85.56,10.63,-0.2,0.04,2.95,1.05,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","ATAGCACTTTAAGACG",15,388.66,10.82,-0.01,0.04,2.93,1.08,0,"1 nonsynonymous","S200D",1
"lib2","SARS-CoV-2","ATAGCAGAGCGAATCG",7,10.21,6,-4.84,1.88,3,1.14,0.01,">1 nonsynonymous","G83L F99S P133F A190G",4
"lib2","SARS-CoV-2","ATAGCAGAGCTTACCT",11,108.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D K56I V77N",3
"lib2","SARS-CoV-2","ATAGCAGATTATCTCA",13,141.75,10.79,-0.04,0.05,2.82,1.12,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","ATAGCAGCAGAGTCGA",2,22.39,10.47,-0.37,0.1,2.81,1,0,"1 nonsynonymous","S69M",1
"lib2","SARS-CoV-2","ATAGCAGTACAATAGG",11,7.22,8.32,-2.52,0.25,2.23,1.06,0.02,">1 nonsynonymous","F8T R25S",2
"lib2","SARS-CoV-2","ATAGCAGTCTATACAT",4,135.88,10.88,0.04,0.05,2.91,1.1,0,"1 nonsynonymous","H189A",1
"lib2","SARS-CoV-2","ATAGCATAATGCCCGA",8,46.23,9.62,-1.22,0.08,2.01,1.01,0,">1 nonsynonymous","A33E D98L T201D",3
"lib2","SARS-CoV-2","ATAGCATATTACTAAG",6,17.45,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2K A14R N30M Q84H N107T Y143A",6
"lib2","SARS-CoV-2","ATAGCATATTAGCTCG",5,26.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C49V P133K N157L",3
"lib2","SARS-CoV-2","ATAGCATCACCGATGC",3,33.88,7.74,-3.1,0.28,1.5,1.09,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","ATAGCATCTGAAAGAA",10,179.94,9.96,-0.88,0.06,2.26,1.04,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","ATAGCATGAGTCATGG",1,28.55,10.69,-0.15,0.09,2.85,1.12,0,">1 nonsynonymous","G9W Q163F",2
"lib2","SARS-CoV-2","ATAGCATGCAAGTTGC",7,0.05,NA,NA,NA,NA,NA,NA,"stop","D34G N92*",2
"lib2","SARS-CoV-2","ATAGCATGCACGGTAT",7,129.12,8.97,-1.86,0.05,2.93,1.1,0,"1 nonsynonymous","N157A",1
"lib2","SARS-CoV-2","ATAGCATTCAACGTTT",6,3.72,NA,NA,NA,NA,NA,NA,"stop","F12E S43D K114H R127E F160V G166*",6
"lib2","SARS-CoV-2","ATAGCATTGACTCTAA",4,33.42,9.27,-1.56,0.17,1.8,1.07,0.01,">1 nonsynonymous","L131C S164F",2
"lib2","SARS-CoV-2","ATAGCCAAAAAATACT",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H D112A P169F",3
"lib2","SARS-CoV-2","ATAGCCAAAGCTGGCA",7,113.13,10.85,0.02,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGCCAAATACGAAG",1,8.91,10.92,0.09,0.11,2.97,1.04,0,">1 nonsynonymous","Q84K I104L",2
"lib2","SARS-CoV-2","ATAGCCAATGTTACCA",9,151.3,8.38,-2.45,0.09,2.72,1.09,0,"1 nonsynonymous","S113I",1
"lib2","SARS-CoV-2","ATAGCCAATTCCTTCC",6,0.08,NA,NA,NA,NA,NA,NA,"stop","S41T T55* C61S",3
"lib2","SARS-CoV-2","ATAGCCATAGCCAACC",11,88.7,9.91,-0.93,0.04,2.86,1.03,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","ATAGCCATCAGTTTAA",3,46.18,6.07,-4.77,0.99,1.5,1.14,0.03,">1 nonsynonymous","A14S F70E K128I",3
"lib2","SARS-CoV-2","ATAGCCATGCCTAAAT",3,36.31,10.02,-0.81,0.07,2.81,1,0,">1 nonsynonymous","S41P S45W",2
"lib2","SARS-CoV-2","ATAGCCATTTAGCTTA",2,28.79,10.21,-0.63,0.07,2.78,1,0,">1 nonsynonymous","G9C A145T",2
"lib2","SARS-CoV-2","ATAGCCCAGAAAGACA",1,15.26,9.3,-1.54,0.12,2.42,1.08,0.01,">1 nonsynonymous","L5A N58S G174K F185V",4
"lib2","SARS-CoV-2","ATAGCCCAGCCGACAT",14,59.02,7.96,-2.87,0.43,1.5,1,0.06,">1 nonsynonymous","F12T N58K K87G C102R",4
"lib2","SARS-CoV-2","ATAGCCCAGTGAAAAG",1,5.86,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","C6W K48F S184D T201I",4
"lib2","SARS-CoV-2","ATAGCCCCGTCGGTCC",8,230.72,10.27,-0.56,0.04,2.78,1.01,0,">1 nonsynonymous","Q84R Y178C",2
"lib2","SARS-CoV-2","ATAGCCCGACACTTTC",1,86.52,10.45,-0.39,0.05,2.9,1.1,0,"1 nonsynonymous","G116L",1
"lib2","SARS-CoV-2","ATAGCCCGCATAACGT",5,0.03,NA,NA,NA,NA,NA,NA,"stop","I2S Y50* I104A L125S Q168N",5
"lib2","SARS-CoV-2","ATAGCCCGCTTTAAAA",17,72.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38A D98I",2
"lib2","SARS-CoV-2","ATAGCCCTAGAATTGT",26,512,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5M R25M T85E G101F K114N R127L Q176H",7
"lib2","SARS-CoV-2","ATAGCCCTGGCCCTCC",15,289.81,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S139I Q176Y F185D",3
"lib2","SARS-CoV-2","ATAGCCCTTTTATAAA",6,59.78,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L57P L95R",2
"lib2","SARS-CoV-2","ATAGCCGGAGAGTAGA",1,6.13,9.27,-1.57,0.75,1.54,1,0.07,">1 nonsynonymous","S41T P82G",2
"lib2","SARS-CoV-2","ATAGCCGTATCCCATA",2,0,NA,NA,NA,NA,NA,NA,"stop","F47Y Y66* N157L S164Y T201V",5
"lib2","SARS-CoV-2","ATAGCCTAAAAGTGAG",2,14.44,8.25,-2.59,0.24,1.73,1.1,0.02,">1 nonsynonymous","F99I T170M",2
"lib2","SARS-CoV-2","ATAGCCTGACCGACCC",9,5.66,NA,NA,NA,NA,NA,NA,"stop","T63M V77W P82* A105N G174R",5
"lib2","SARS-CoV-2","ATAGCCTGCTCGACTG",2,91.42,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","Q176P",1
"lib2","SARS-CoV-2","ATAGCCTGTCTCAAGC",1,33.16,6.08,-4.76,1.48,1.5,1.2,0.02,">1 nonsynonymous","E10L N157I",2
"lib2","SARS-CoV-2","ATAGCCTGTTAGGTTT",3,35.18,7.97,-2.87,0.29,1.5,1.08,0.04,">1 nonsynonymous","G9P Y35P F99S N110S N118S F134I Q176T",7
"lib2","SARS-CoV-2","ATAGCCTTCTAATTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50G S69Y I104G N151*",4
"lib2","SARS-CoV-2","ATAGCCTTTGCACTAA",3,12.87,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N30W S41V K56N G86R N110I L122G E135S Y175F",8
"lib2","SARS-CoV-2","ATAGCGACAATATCAC",1,42.58,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F17V R27M Y93H",3
"lib2","SARS-CoV-2","ATAGCGACCTCCCAGA",8,166.17,10.06,-0.78,0.04,2.92,1.05,0,">1 nonsynonymous","S45N L131V F156Y",3
"lib2","SARS-CoV-2","ATAGCGAGATCAGGCA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77H P96C F99L L125Y F185I",5
"lib2","SARS-CoV-2","ATAGCGAGCCCAAAAC",1,9.15,9.79,-1.04,0.18,2.69,1,0.01,">1 nonsynonymous","A67I P133G G146S",3
"lib2","SARS-CoV-2","ATAGCGAGGTATACCT",6,108.94,9.47,-1.36,0.08,2.65,1.11,0,"1 nonsynonymous","N118W",1
"lib2","SARS-CoV-2","ATAGCGAGTAATGGAT",1,43.31,9.16,-1.68,0.15,1.62,1.06,0.01,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","ATAGCGATAAGCGTGG",11,270.13,9.47,-1.36,0.03,2.9,1.08,0,">1 nonsynonymous","I2R C61A N109T",3
"lib2","SARS-CoV-2","ATAGCGCAGATGGAGA",10,117.19,8.39,-2.45,0.11,1.89,1.02,0.01,">1 nonsynonymous","Y91V G116M C195G",3
"lib2","SARS-CoV-2","ATAGCGCATAATTATC",23,308.76,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K26R Y35I S69L A81L D90S T140H C150N",7
"lib2","SARS-CoV-2","ATAGCGCATACAGGTC",3,38.82,10.71,-0.13,0.06,2.9,1.12,0,"1 nonsynonymous","N110Q",1
"lib2","SARS-CoV-2","ATAGCGCGGTCTTGCA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","L5N P96*",2
"lib2","SARS-CoV-2","ATAGCGCTTATCATTG",5,16.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L183S P197H",2
"lib2","SARS-CoV-2","ATAGCGGGATTGGAAC",5,45.17,10.33,-0.51,0.06,2.91,1,0,">1 nonsynonymous","S41A D59Y N120Y K198G",4
"lib2","SARS-CoV-2","ATAGCGGGTACAATAA",7,41.83,7.92,-2.92,0.18,1.5,1.09,0.02,">1 nonsynonymous","L5S K48T G86C T201R",4
"lib2","SARS-CoV-2","ATAGCGGTGCAATCGA",2,58.04,6.32,-4.52,0.38,1.5,1.12,0.01,">1 nonsynonymous","K114S C158G",2
"lib2","SARS-CoV-2","ATAGCGTGCCATTGAG",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92K Y119A S200L",3
"lib2","SARS-CoV-2","ATAGCTAAAAGTATGA",1,31.06,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","T3Y Y35V",2
"lib2","SARS-CoV-2","ATAGCTAACCCCATCA",6,38.57,10.84,0,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGCTAAGATATAAT",1,52.49,10.28,-0.56,0.09,2.36,1.03,0,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","ATAGCTAATACAAACA",4,2.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99W",1
"lib2","SARS-CoV-2","ATAGCTAATGCTATAA",16,23.92,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49T V103G P149M",3
"lib2","SARS-CoV-2","ATAGCTACAAGTCAAT",5,22.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K G172Y T201D",3
"lib2","SARS-CoV-2","ATAGCTAGAAATTTGT",3,71.68,10.8,-0.04,0.03,2.88,1.12,0,">1 nonsynonymous","V37L S43L",2
"lib2","SARS-CoV-2","ATAGCTAGGCTCCAAA",11,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84W",1
"lib2","SARS-CoV-2","ATAGCTATAAACCACT",1,50.75,10.76,-0.07,0.04,2.99,1.05,0,"1 nonsynonymous","K48Q",1
"lib2","SARS-CoV-2","ATAGCTATAGCACTAC",6,28.15,9.67,-1.16,0.13,1.99,1,0.01,">1 nonsynonymous","A105L N171W",2
"lib2","SARS-CoV-2","ATAGCTATCTGACAAT",3,63.36,9.86,-0.98,0.06,2.69,1.03,0,">1 nonsynonymous","A33V G83S G152V",3
"lib2","SARS-CoV-2","ATAGCTATCTTAAGAG",2,26.99,10.1,-0.74,0.04,2.82,1.08,0,"1 nonsynonymous","Y35D",1
"lib2","SARS-CoV-2","ATAGCTATTTGTTTTT",6,50.66,8.85,-1.98,0.06,2.95,1.09,0,"1 nonsynonymous","L125E",1
"lib2","SARS-CoV-2","ATAGCTCAACGTATCA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","C6L K26T L60F R78E F99L N120* G146V",7
"lib2","SARS-CoV-2","ATAGCTCAAGCACAAA",3,3.14,NA,NA,NA,NA,NA,NA,"stop","C6R G174M C195Y K198*",4
"lib2","SARS-CoV-2","ATAGCTCACACCTAAA",1,8.83,10.74,-0.1,0.39,1.5,1.04,0.07,">1 nonsynonymous","N13Y N64H Y121I P149M",4
"lib2","SARS-CoV-2","ATAGCTCACGATCAAA",8,76.4,10.44,-0.39,0.05,2.76,1.09,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","ATAGCTCACGCCTTAA",10,182.26,9.43,-1.41,0.05,1.95,1.08,0,">1 nonsynonymous","V11L V37L T85M Y178S",4
"lib2","SARS-CoV-2","ATAGCTCAGTAAGCCA",5,132.02,10.94,0.1,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGCTCATACGAACG",3,9.58,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","I104T F134L L162Q S200Y",4
"lib2","SARS-CoV-2","ATAGCTCCCGAAGGGA",4,17.08,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L60P I80Y I88W",3
"lib2","SARS-CoV-2","ATAGCTCCGAGCAAAT",7,34.09,10.84,0,0.06,2.89,1.1,0,"1 nonsynonymous","P149E",1
"lib2","SARS-CoV-2","ATAGCTCTAGATAGAC",6,4.02,NA,NA,NA,NA,NA,NA,"stop","Y39L T63N N92* A105S P149E",5
"lib2","SARS-CoV-2","ATAGCTCTCACTAGAT",7,53.46,10.87,0.04,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGCTCTTAAAGACC",8,156.01,10.11,-0.72,0.05,2.7,1.02,0,">1 nonsynonymous","Y35T S41D E141M",3
"lib2","SARS-CoV-2","ATAGCTGAATCGCGCC",4,0.65,NA,NA,NA,NA,NA,NA,"stop","N120* P161V",2
"lib2","SARS-CoV-2","ATAGCTGAGGTTATAG",5,16.01,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C49V T55I F70L A89L T100R P133S C158G G166E V180C T201S",10
"lib2","SARS-CoV-2","ATAGCTGGCACGTTGA",13,65.5,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","I2G L57M A89T Y121W E141F",5
"lib2","SARS-CoV-2","ATAGCTGGCTTCTAGT",1,27.6,9.59,-1.25,0.16,1.51,1.07,0.02,">1 nonsynonymous","I2R F8A Q84T K128Y Y178F",5
"lib2","SARS-CoV-2","ATAGCTGGTCTAAGTA",15,166.23,6.77,-4.07,0.32,1.5,1.13,0.02,">1 nonsynonymous","K87S Y119I S139L",3
"lib2","SARS-CoV-2","ATAGCTTATACCTAAT",4,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R G83N",2
"lib2","SARS-CoV-2","ATAGCTTATCAAAAAG",3,52.49,9.75,-1.09,0.09,1.81,1.04,0,">1 nonsynonymous","D90H K94F",2
"lib2","SARS-CoV-2","ATAGCTTATCCATGAG",3,108.15,10.8,-0.04,0.05,2.93,1.09,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","ATAGCTTCACCATGCG",16,534.61,10.45,-0.38,0.03,2.92,1.06,0,">1 nonsynonymous","F62T Y178N",2
"lib2","SARS-CoV-2","ATAGCTTCCCTCTTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* T15S I88N",3
"lib2","SARS-CoV-2","ATAGCTTGCGAACTTG",1,8.37,6,-4.84,2,1.5,1.23,0.08,">1 nonsynonymous","Y119L S129P P169L G174W",4
"lib2","SARS-CoV-2","ATAGCTTTAAGCTATG",3,27.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T63M F99I G146P",3
"lib2","SARS-CoV-2","ATAGCTTTAATGATGT",10,77.7,10.1,-0.74,0.09,2.37,1.02,0,">1 nonsynonymous","D90N E135K E154S",3
"lib2","SARS-CoV-2","ATAGCTTTTACAAAAC",2,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60W",1
"lib2","SARS-CoV-2","ATAGGAAAGATCATCT",4,65.82,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29L G51Y N107R I138S G174C",5
"lib2","SARS-CoV-2","ATAGGAAATACTAACA",4,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K N107P T201V",3
"lib2","SARS-CoV-2","ATAGGAACAGACTTAA",16,219.78,10.72,-0.12,0.04,2.96,1.04,0,"1 nonsynonymous","S36H",1
"lib2","SARS-CoV-2","ATAGGAACATACTTGC",8,122.87,8.95,-1.89,0.05,2.64,1.11,0,">1 nonsynonymous","I2A T63R Q176L",3
"lib2","SARS-CoV-2","ATAGGAACCATCCTTC",10,3.78,NA,NA,NA,NA,NA,NA,"stop","T63* V71K R136*",3
"lib2","SARS-CoV-2","ATAGGAAGAGATTCAG",2,0.38,NA,NA,NA,NA,NA,NA,"stop","I2P Y50F L57T L95Y K128* Y159S Y178D",7
"lib2","SARS-CoV-2","ATAGGAAGGGCCGAGA",7,186.35,10.9,0.06,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGAATAAGCCAAA",1,30.21,10.87,0.04,0.09,2.84,1.12,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","ATAGGAATGCGTTCCG",2,26.78,9.29,-1.54,0.08,1.86,1.07,0,">1 nonsynonymous","L38S S139G",2
"lib2","SARS-CoV-2","ATAGGAATTACGTATT",3,133.99,8.87,-1.96,0.06,2.97,1.08,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","ATAGGACAAAAGATCA",1,30.19,8.45,-2.38,0.44,1.53,1.04,0.08,">1 nonsynonymous","N107P L162R",2
"lib2","SARS-CoV-2","ATAGGACACATAAAAC",7,44.79,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F99H C158V",2
"lib2","SARS-CoV-2","ATAGGACACGTATCAG",4,114.75,10.52,-0.31,0.06,2.81,1.18,0,"1 nonsynonymous","A18K",1
"lib2","SARS-CoV-2","ATAGGACACTACTGCC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F12L K26* F47*",3
"lib2","SARS-CoV-2","ATAGGACAGCTCGATG",3,18.35,9.02,-1.82,0.16,2.01,1.06,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","ATAGGACATAAGGCAA",5,130.69,10.16,-0.67,0.05,2.82,1.02,0,"1 nonsynonymous","C31M",1
"lib2","SARS-CoV-2","ATAGGACCAAGGGCAT",7,54.13,9.54,-1.3,0.08,1.87,1.03,0,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","ATAGGACCAATTGTTC",13,211.12,10.28,-0.56,0.03,2.84,1.04,0,">1 nonsynonymous","G51T T63K",2
"lib2","SARS-CoV-2","ATAGGACCACCCAGCC",2,50.98,10.49,-0.34,0.09,2.87,1.08,0,"1 nonsynonymous","I104T",1
"lib2","SARS-CoV-2","ATAGGACCTACTAAAG",6,32.3,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A18P R73L L95T F99C",4
"lib2","SARS-CoV-2","ATAGGACCTCTAGGTG",1,13.95,10.15,-0.69,0.13,2.71,1,0.01,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","ATAGGACGATAAACTT",4,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T V77A I88S N118M F167L",5
"lib2","SARS-CoV-2","ATAGGACGGACCAAAG",4,126.51,10.84,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGACTACAACCTA",1,7.92,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N4M T85F I104Y Y123D Y143T",5
"lib2","SARS-CoV-2","ATAGGACTATCAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","T15C P54* G146P Q168C",4
"lib2","SARS-CoV-2","ATAGGAGATAATTAAG",1,6.49,11.16,0.33,0.07,3,1,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","ATAGGAGGGTTAGATG",3,0.56,NA,NA,NA,NA,NA,NA,"stop","N40T L122E K132* P161H",4
"lib2","SARS-CoV-2","ATAGGAGGTTGAGAGA",2,28.56,10.87,0.03,0.06,2.94,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGAGTAACGAATT",7,60.47,8.64,-2.2,0.2,1.6,1.2,0.02,">1 nonsynonymous","P7L A14L S36L E135G",4
"lib2","SARS-CoV-2","ATAGGAGTCCTAACCT",1,39.51,10.52,-0.32,0.05,2.94,1.07,0,"1 nonsynonymous","I138P",1
"lib2","SARS-CoV-2","ATAGGATAAGCGAAAC",2,95.22,10.64,-0.2,0.05,2.88,1.13,0,">1 nonsynonymous","K56M V173N",2
"lib2","SARS-CoV-2","ATAGGATATATCTGTT",8,2.1,NA,NA,NA,NA,NA,NA,"stop","L38N C61S W106*",3
"lib2","SARS-CoV-2","ATAGGATTACCTGATC",3,24.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9K A105V Y159L K198I",4
"lib2","SARS-CoV-2","ATAGGATTGATTCAAA",7,9.17,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C31L D98H V103D N151T",4
"lib2","SARS-CoV-2","ATAGGATTTATATCCA",5,29.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2N W23F V180S",3
"lib2","SARS-CoV-2","ATAGGATTTGAAATTG",13,194.55,8.8,-2.03,0.05,3,1.06,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","ATAGGCAAACCATGCG",13,203.27,10.38,-0.46,0.03,2.95,1.06,0,">1 nonsynonymous","G83N K87V",2
"lib2","SARS-CoV-2","ATAGGCAAGGAGAGAT",2,11.81,10.39,-0.45,0.15,2.91,1,0.01,"1 nonsynonymous","F47C",1
"lib2","SARS-CoV-2","ATAGGCACAACCCATT",4,180.96,10.79,-0.05,0.04,2.95,1.07,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","ATAGGCACGAGGTTAA",3,27.33,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","G51P K56G I88P",3
"lib2","SARS-CoV-2","ATAGGCACGTGATTGC",6,160.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14V I72Q Y178R A190C",4
"lib2","SARS-CoV-2","ATAGGCACTAACATGA",4,35.22,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","T63F W106M I138K G146N",4
"lib2","SARS-CoV-2","ATAGGCATAAAGTTCG",7,60.79,10.61,-0.22,0.04,2.89,1.11,0,">1 nonsynonymous","N4S S139D T148S",3
"lib2","SARS-CoV-2","ATAGGCATAATCGATA",2,44.8,10.67,-0.16,0.07,2.88,1.14,0,">1 nonsynonymous","G9E S36M",2
"lib2","SARS-CoV-2","ATAGGCATATCGCATG",1,24.13,10.72,-0.12,0.13,2.62,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGCATGATCATAA",8,30.72,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","D34V R179E",2
"lib2","SARS-CoV-2","ATAGGCCACAATAAAG",8,117.19,10.43,-0.41,0.04,2.89,1.07,0,">1 nonsynonymous","S41K C61Q S164Y",3
"lib2","SARS-CoV-2","ATAGGCCACGGTAACT",4,34.84,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15Q G83P Y91W N120A Y159S",5
"lib2","SARS-CoV-2","ATAGGCCAGCAAATGC",6,98.46,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","ATAGGCCATTGTAACT",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L V20L I104R",3
"lib2","SARS-CoV-2","ATAGGCCTACGACACC",26,246.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L95A Q144K G152D",3
"lib2","SARS-CoV-2","ATAGGCCTGGGTTAAT",10,12.32,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","F12S S45G G101E",3
"lib2","SARS-CoV-2","ATAGGCGAGTCTCCAA",1,22.01,6,-4.84,2,3,1.13,0.02,">1 nonsynonymous","L5R F8E N40P Y50K D90C C102L N107S",7
"lib2","SARS-CoV-2","ATAGGCGCCCGCATAG",6,61.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8D Y39R K48D T85D S184I",5
"lib2","SARS-CoV-2","ATAGGCGGATTATACG",16,212.01,10.76,-0.08,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGCGTAGCCGCAA",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F G117E Y178L",3
"lib2","SARS-CoV-2","ATAGGCGTATAATTAA",8,152.41,8.37,-2.46,0.24,1.5,1.05,0.03,">1 nonsynonymous","S43V K94G Y143L V173L",4
"lib2","SARS-CoV-2","ATAGGCTCCTACCCTT",7,23.17,7.28,-3.56,0.35,1.5,1.03,0.06,">1 nonsynonymous","S45D V181R",2
"lib2","SARS-CoV-2","ATAGGCTGAAGAAGTA",4,69.08,10.34,-0.49,0.04,2.8,1.06,0,">1 nonsynonymous","P54M R136S",2
"lib2","SARS-CoV-2","ATAGGCTTCAACTGTT",5,61.77,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F8Y Y35R G117F",3
"lib2","SARS-CoV-2","ATAGGGAAACCCAATC",3,137.96,10.69,-0.15,0.05,2.93,1.09,0,"1 nonsynonymous","F62C",1
"lib2","SARS-CoV-2","ATAGGGAACGAAGTTA",5,116.43,8.84,-2,0.3,1.5,1,0.04,">1 nonsynonymous","V11D I28S P149I",3
"lib2","SARS-CoV-2","ATAGGGAACTAATCGT",5,46.47,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","G74V I80F K132V G146N Q176K",5
"lib2","SARS-CoV-2","ATAGGGACAATGAGCA",4,90.95,10.03,-0.81,0.04,2.91,1.03,0,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","ATAGGGAGCATACTCC",5,58.99,10.74,-0.09,0.05,2.98,1.03,0,">1 nonsynonymous","A22E S29T G146S",3
"lib2","SARS-CoV-2","ATAGGGAGTGGACTAT",4,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M K87V W106K T148I",4
"lib2","SARS-CoV-2","ATAGGGATCGAGACGC",3,55.89,8.77,-2.07,0.09,2.95,1.06,0,">1 nonsynonymous","D90C L122T Q168L",3
"lib2","SARS-CoV-2","ATAGGGCCAACCCCTT",9,95.79,10.64,-0.19,0.05,2.9,1.11,0,"1 nonsynonymous","Y50F",1
"lib2","SARS-CoV-2","ATAGGGCCCGGTATTA",3,14.17,10.73,-0.1,0.12,2.99,1.05,0,">1 nonsynonymous","V37W D97Q",2
"lib2","SARS-CoV-2","ATAGGGCCCTCGAAAA",4,1.6,NA,NA,NA,NA,NA,NA,"stop","L5* V71W P82M",3
"lib2","SARS-CoV-2","ATAGGGCGATATGTAA",20,247.34,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A89Y P177K",2
"lib2","SARS-CoV-2","ATAGGGCTAGGGATCA",8,220.08,10.57,-0.27,0.02,2.93,1.06,0,">1 nonsynonymous","L60T V77L",2
"lib2","SARS-CoV-2","ATAGGGCTGACATGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N K26T A89D T201M",4
"lib2","SARS-CoV-2","ATAGGGGTATGTTACC",1,10.48,9.59,-1.25,0.25,1.8,1.11,0.02,">1 nonsynonymous","A105V S184K",2
"lib2","SARS-CoV-2","ATAGGGTAACCGTATT",10,2.63,NA,NA,NA,NA,NA,NA,"stop","I28A S43V G86W S113*",4
"lib2","SARS-CoV-2","ATAGGGTATATAGGAT",11,77.71,6,-4.84,1.52,1.5,1.13,0.01,">1 nonsynonymous","I72V D97S C102I N109V Y119H Y165E",6
"lib2","SARS-CoV-2","ATAGGGTGTTGGCACT",11,195.41,9.28,-1.55,0.08,1.73,1.07,0,">1 nonsynonymous","G86K L188N",2
"lib2","SARS-CoV-2","ATAGGGTTAACGCCCA",3,67.83,10.78,-0.05,0.05,2.91,1.1,0,"1 nonsynonymous","S200Q",1
"lib2","SARS-CoV-2","ATAGGTAACTTTCCAC",6,87.85,10.26,-0.57,0.04,2.88,1.04,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","ATAGGTAATAAGCTTG",2,24.01,8.6,-2.24,0.37,1.5,1.03,0.07,">1 nonsynonymous","D68T P149L Y178V",3
"lib2","SARS-CoV-2","ATAGGTAATATACAAA",5,49.52,10.82,-0.02,0.05,2.98,1.04,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","ATAGGTACACGCCCCT",2,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R K114M L122W",3
"lib2","SARS-CoV-2","ATAGGTACTACAATCG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I2* K128I G152C L162R",4
"lib2","SARS-CoV-2","ATAGGTAGTTTAACAT",1,36.5,8.06,-2.78,0.29,1.5,1.1,0.02,">1 nonsynonymous","Y91A V173S",2
"lib2","SARS-CoV-2","ATAGGTATGTGCAAAC",2,27.28,8.61,-2.23,0.11,2.78,1.12,0,">1 nonsynonymous","R27M A81S Y119S",3
"lib2","SARS-CoV-2","ATAGGTATTAAAGTTA",1,18.84,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G9E A14E F99H G117S",4
"lib2","SARS-CoV-2","ATAGGTCAAGTGCAAA",11,29.5,6.14,-4.69,0.42,3,1.11,0.01,">1 nonsynonymous","C6P S69K C102S G155M",4
"lib2","SARS-CoV-2","ATAGGTCAGTTTAATA",8,48.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N92K G174A",2
"lib2","SARS-CoV-2","ATAGGTCATAACCGTG",8,192.14,9.82,-1.01,0.05,2.07,1.03,0,">1 nonsynonymous","N30D T55P D90T P149S",4
"lib2","SARS-CoV-2","ATAGGTCCACTGATTC",1,25.06,10.86,0.02,0.06,2.86,1.16,0,"1 nonsynonymous","V153L",1
"lib2","SARS-CoV-2","ATAGGTCCAGAGACAA",7,62.93,10.83,-0.01,0.08,2.93,1.08,0,"1 nonsynonymous","K114Q",1
"lib2","SARS-CoV-2","ATAGGTCCGGGTTAAT",4,25.9,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T3V D97Y R127I",3
"lib2","SARS-CoV-2","ATAGGTCGATACGAAT",4,15.31,7.03,-3.81,0.17,1.5,1.06,0,">1 nonsynonymous","R27C Y121I I142A G155A",4
"lib2","SARS-CoV-2","ATAGGTCTCATAATCA",12,174.57,10.3,-0.53,0.03,2.9,1.04,0,">1 nonsynonymous","D59V N151A",2
"lib2","SARS-CoV-2","ATAGGTGAAATTCAAG",1,6.49,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y39R S53F L57F I88M D98Y",5
"lib2","SARS-CoV-2","ATAGGTGACCCAAAGA",7,0.78,NA,NA,NA,NA,NA,NA,"stop","P161* E186D",2
"lib2","SARS-CoV-2","ATAGGTGCTCCTTATA",8,65.38,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y91K L122P S147A",3
"lib2","SARS-CoV-2","ATAGGTGCTTTTGACT",2,31.62,10.61,-0.23,0.12,2.6,1.12,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGTGGGTAATCTG",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q Q79M K94M E141L",4
"lib2","SARS-CoV-2","ATAGGTGTTTAAATAA",4,0.41,NA,NA,NA,NA,NA,NA,"stop","A14T V103* N110R P177H",4
"lib2","SARS-CoV-2","ATAGGTTAAGACTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* A67S I80L",3
"lib2","SARS-CoV-2","ATAGGTTAAGAGCAAA",5,60,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","W106S R136I F167V",3
"lib2","SARS-CoV-2","ATAGGTTAGCTACGAA",10,146.19,10.72,-0.12,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGGTTCCCCTCTGG",5,118.26,10.26,-0.58,0.03,2.81,1.05,0,"1 nonsynonymous","Y66R",1
"lib2","SARS-CoV-2","ATAGGTTGAAAGAAAC",2,11.62,10.39,-0.44,0.09,2.81,1.09,0,">1 nonsynonymous","T15K Y178N",2
"lib2","SARS-CoV-2","ATAGGTTTTTTTCGCA",13,248.49,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R25F S45N V52I V103I Q144M G174V",6
"lib2","SARS-CoV-2","ATAGTAAAAAATATGT",4,11.92,10.3,-0.53,0.07,2.89,1.14,0,"1 nonsynonymous","T170W",1
"lib2","SARS-CoV-2","ATAGTAAAATAGCGAT",8,92.14,9.61,-1.23,0.08,2.27,1.11,0,">1 nonsynonymous","Y121K S129R N130V S139G",4
"lib2","SARS-CoV-2","ATAGTAAATATTCATT",6,100.42,10.56,-0.27,0.06,2.9,1.03,0,">1 nonsynonymous","N1L K132M C195N",3
"lib2","SARS-CoV-2","ATAGTAAATTCGGTGG",1,5.9,10.74,-0.1,0.11,2.6,1.41,0.01,"1 nonsynonymous","S43M",1
"lib2","SARS-CoV-2","ATAGTAACAACATAGC",13,204.14,10.88,0.04,0.04,2.93,1.07,0,"1 nonsynonymous","F134Y",1
"lib2","SARS-CoV-2","ATAGTAACAAGACTAG",10,189.27,10.22,-0.61,0.04,2.92,1.09,0,">1 nonsynonymous","K56T P169I",2
"lib2","SARS-CoV-2","ATAGTAACATATCGTA",11,263.19,10.27,-0.56,0.03,2.85,1.05,0,"1 nonsynonymous","A67T",1
"lib2","SARS-CoV-2","ATAGTAACGGATTTCT",4,23.72,8.69,-2.14,0.21,1.5,1.04,0.02,">1 nonsynonymous","L5K A14K Y35N S129I P191F K199M",6
"lib2","SARS-CoV-2","ATAGTAACGGCTTAGC",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T V65R N92S N171I S184L",5
"lib2","SARS-CoV-2","ATAGTAACTGAGTTCC",3,4.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","ATAGTAACTGGATTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* Q84V T100D",3
"lib2","SARS-CoV-2","ATAGTAAGAATCTAAA",7,31.8,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N4S S36N L57F R73M K87Q F99L N107T",7
"lib2","SARS-CoV-2","ATAGTAAGAGGAGATG",10,77.07,6,-4.83,0.48,1.81,1.14,0,">1 nonsynonymous","C6R N157F",2
"lib2","SARS-CoV-2","ATAGTAAGTCAATAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44* V180Y",2
"lib2","SARS-CoV-2","ATAGTAATGTCACACA",1,15.95,10.1,-0.73,0.24,2.63,1.26,0.02,">1 nonsynonymous","F62E E141A",2
"lib2","SARS-CoV-2","ATAGTAATGTCATCTA",11,137.2,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35R Y50S A81D K132I",4
"lib2","SARS-CoV-2","ATAGTACAAACAACGA",1,54.61,10.7,-0.13,0.09,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTACAACAGCAAA",2,99.22,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G51I Q79P N120T",3
"lib2","SARS-CoV-2","ATAGTACACAAAGAAA",1,32.62,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V37I Y165I T170F",3
"lib2","SARS-CoV-2","ATAGTACAGAAAAACG",9,150.28,10.86,0.03,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTACCATGCGATA",12,114.01,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A33H L95G N107V C150S",4
"lib2","SARS-CoV-2","ATAGTACGTAAAAGAG",7,1.43,NA,NA,NA,NA,NA,NA,"stop","V20W A105L F134*",3
"lib2","SARS-CoV-2","ATAGTACTACAAACAG",6,46.73,8.9,-1.94,0.13,2.57,1.1,0.01,">1 nonsynonymous","I138C G146M",2
"lib2","SARS-CoV-2","ATAGTACTGAAAAGCC",1,27.95,9.31,-1.53,0.1,1.97,1,0,">1 nonsynonymous","L57T I138W",2
"lib2","SARS-CoV-2","ATAGTACTGGAGAAAG",8,66.65,10.28,-0.56,0.03,2.9,1.1,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","ATAGTAGAAAGATGAA",2,0.06,NA,NA,NA,NA,NA,NA,"stop","T15I A105L G146* G155S P197T",5
"lib2","SARS-CoV-2","ATAGTAGAAGCAAAAA",1,8.64,10.61,-0.23,0.35,2.46,1.09,0.04,">1 nonsynonymous","V77W G101W F167R",3
"lib2","SARS-CoV-2","ATAGTAGAAGTACGTA",5,35.44,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","G9A S41E T85Q N107C R136G I142T F160S",7
"lib2","SARS-CoV-2","ATAGTAGAGACACAGT",5,35.68,10.47,-0.36,0.07,2.9,1.06,0,"1 nonsynonymous","F62K",1
"lib2","SARS-CoV-2","ATAGTAGCCGTTCAAT",4,70.16,9.74,-1.09,0.08,2.38,1.09,0,">1 nonsynonymous","S45W Y143F P169R",3
"lib2","SARS-CoV-2","ATAGTAGCTAAAAAAA",3,33.48,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D68L Y91T",2
"lib2","SARS-CoV-2","ATAGTAGGCGAAATTT",1,29.42,10.15,-0.68,0.05,2.95,1.08,0,">1 nonsynonymous","P149M G152T",2
"lib2","SARS-CoV-2","ATAGTAGTACTAAAAA",1,15.04,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N92M I138R",2
"lib2","SARS-CoV-2","ATAGTAGTTCACCTGT",2,89.18,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G9T V32E Y50L Y123W",4
"lib2","SARS-CoV-2","ATAGTATAAAAACAAA",6,42.55,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35C N107H R136L",3
"lib2","SARS-CoV-2","ATAGTATAACGGTACG",3,16.22,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","W23K P96R T201M",3
"lib2","SARS-CoV-2","ATAGTATAATGATGCG",9,206.24,10.35,-0.48,0.02,2.93,1.01,0,"1 nonsynonymous","Y35C",1
"lib2","SARS-CoV-2","ATAGTATAGGAAAACT",5,165.25,8.08,-2.75,0.13,2.06,1.1,0.01,">1 nonsynonymous","I2A N64T G146I G155A",4
"lib2","SARS-CoV-2","ATAGTATATACACGAC",11,218.84,6,-4.84,0.86,1.5,1.12,0,">1 nonsynonymous","A33C C150R",2
"lib2","SARS-CoV-2","ATAGTATATCAAAACT",9,32.4,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A33K C61Y V77W K114R Y119S",5
"lib2","SARS-CoV-2","ATAGTATCACCCAGAT",6,31.31,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","W106I I142F Y178S",3
"lib2","SARS-CoV-2","ATAGTATGACATCTGG",2,152.1,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S45T N107V Y175A",3
"lib2","SARS-CoV-2","ATAGTATGTTTATGCA",3,35.72,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F47D Y121L S139I",3
"lib2","SARS-CoV-2","ATAGTATTCAAGATGG",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E I88A E141M P197T",4
"lib2","SARS-CoV-2","ATAGTATTGACCGGTC",9,115.77,10.54,-0.3,0.03,2.92,1.07,0,">1 nonsynonymous","T63V G83N",2
"lib2","SARS-CoV-2","ATAGTATTGTAGCATC",8,241.17,10.73,-0.1,0.03,2.91,1.08,0,"1 nonsynonymous","S29V",1
"lib2","SARS-CoV-2","ATAGTCAAAAACGGAC",4,13.8,6,-4.84,1.71,3,1.15,0.01,">1 nonsynonymous","K56R I88W I104F E186A",4
"lib2","SARS-CoV-2","ATAGTCAAATTAGGAA",2,43.49,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S45C P177L",2
"lib2","SARS-CoV-2","ATAGTCAAGGTGCACG",4,41.79,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N40F G83V G166W",3
"lib2","SARS-CoV-2","ATAGTCACAATATATC",8,46.32,7.35,-3.48,0.27,1.5,1.12,0.02,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","ATAGTCAGAACCATTT",3,31.74,10.79,-0.04,0.04,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTCAGGAATTGTA",5,16.87,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","ATAGTCAGGACATAGG",3,21.78,6,-4.84,2,1.86,1.05,0,">1 nonsynonymous","Y35C V103G N107R D112S",4
"lib2","SARS-CoV-2","ATAGTCATAACAAAAG",4,142.7,10.64,-0.2,0.05,2.86,1.11,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","ATAGTCATAATACTAG",6,72.04,10.66,-0.18,0.03,2.94,1.03,0,">1 nonsynonymous","L5K L60M A67V",3
"lib2","SARS-CoV-2","ATAGTCATATAATGCT",8,141.98,9.7,-1.14,0.04,1.93,1.05,0,"1 nonsynonymous","F17Q",1
"lib2","SARS-CoV-2","ATAGTCATATTACTGC",4,1.37,NA,NA,NA,NA,NA,NA,"stop","P54L I72V A81M S113V F156*",5
"lib2","SARS-CoV-2","ATAGTCATGGACGCCA",3,15.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L122G R127L Y143H",3
"lib2","SARS-CoV-2","ATAGTCCAACAATGAG",6,104.75,10.84,0.01,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTCCCACACATTT",7,87.76,10.77,-0.07,0.04,2.97,1.06,0,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","ATAGTCCGAATTAGGT",2,16.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82I R179T",2
"lib2","SARS-CoV-2","ATAGTCCGCTAGAACA",4,34.21,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","G9V K94L S139Q F167A",4
"lib2","SARS-CoV-2","ATAGTCCTAGATAAAA",3,97.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9Q N107R S139R C158K",4
"lib2","SARS-CoV-2","ATAGTCCTATAGAGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S45Y F99N N118E",4
"lib2","SARS-CoV-2","ATAGTCCTTAGGACCT",3,38.15,9.15,-1.69,0.04,3,1.04,0,">1 nonsynonymous","N58T Y119P",2
"lib2","SARS-CoV-2","ATAGTCGAAAAAAGCT",9,202.42,10.47,-0.37,0.03,2.88,1.07,0,">1 nonsynonymous","F47Y N130H",2
"lib2","SARS-CoV-2","ATAGTCGAAATTGAAG",9,103.98,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","A105I Y143V G152P",3
"lib2","SARS-CoV-2","ATAGTCGGGACCAGGA",1,7.9,7.69,-3.14,0.47,2.69,1.41,0.04,">1 nonsynonymous","S45G G117V S184L",3
"lib2","SARS-CoV-2","ATAGTCGTATGCATCT",3,5.58,6,-4.84,1.29,3,1.08,0.01,">1 nonsynonymous","A81R V180N",2
"lib2","SARS-CoV-2","ATAGTCTAAAGGGTAA",6,96.83,10.86,0.02,0.05,2.91,1.09,0,"1 nonsynonymous","P54A",1
"lib2","SARS-CoV-2","ATAGTCTACACTGATC",7,3.01,NA,NA,NA,NA,NA,NA,"stop","A33* F99H R136M",3
"lib2","SARS-CoV-2","ATAGTCTACAGTTCCG",15,1.99,NA,NA,NA,NA,NA,NA,"stop","V37* G51Y G86S L95F A105R",5
"lib2","SARS-CoV-2","ATAGTCTATCAAGCTG",7,126.74,9.52,-1.32,0.03,2.98,1.03,0,">1 nonsynonymous","S29T Y119Q",2
"lib2","SARS-CoV-2","ATAGTCTGACCACTGG",1,9.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L L95Y V103L P161Y L188P S200L",6
"lib2","SARS-CoV-2","ATAGTCTGATAATAGC",2,39.06,8.65,-2.19,0.07,2.95,1.03,0,">1 nonsynonymous","Q84R Y159L",2
"lib2","SARS-CoV-2","ATAGTCTTAATCAAAA",22,278.86,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P169W Y175R",2
"lib2","SARS-CoV-2","ATAGTGAAGGAATTCA",3,38.7,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44Y G74V A105N P191N",4
"lib2","SARS-CoV-2","ATAGTGACGAGAAGTG",4,75.53,10.61,-0.22,0.04,2.9,1.12,0,">1 nonsynonymous","R27K K199S",2
"lib2","SARS-CoV-2","ATAGTGCAAACGAATT",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63V S113T",2
"lib2","SARS-CoV-2","ATAGTGCAATTTCCTG",4,61.44,10.31,-0.53,0.06,2.87,1.04,0,">1 nonsynonymous","A42Y A81K",2
"lib2","SARS-CoV-2","ATAGTGCATAAGAAAT",11,0.7,NA,NA,NA,NA,NA,NA,"stop","K94E P133M G155* F185E",4
"lib2","SARS-CoV-2","ATAGTGCCAATCAGTA",8,75.96,7.75,-3.08,0.24,1.5,1.09,0.02,">1 nonsynonymous","T55C I80L N130L Q168L",4
"lib2","SARS-CoV-2","ATAGTGCGCATAGGTG",2,15.51,6,-4.84,2,1.5,1.12,0.08,">1 nonsynonymous","C61W P96S S129I S139Y",4
"lib2","SARS-CoV-2","ATAGTGCTGGACCCTA",14,102.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14S R27Q K56L A105F Y121V P169H T201K",7
"lib2","SARS-CoV-2","ATAGTGCTTGTTTGTA",2,50.17,10.33,-0.5,0.08,2.79,1,0,">1 nonsynonymous","K56T Q84M F134R Q163C",4
"lib2","SARS-CoV-2","ATAGTGGATAGACGAT",9,136.1,10.63,-0.21,0.03,2.94,1.07,0,">1 nonsynonymous","K114L P149G",2
"lib2","SARS-CoV-2","ATAGTGGCTCTCACTG",4,349.59,10.25,-0.59,0.03,2.8,1.04,0,">1 nonsynonymous","A81T N130S",2
"lib2","SARS-CoV-2","ATAGTGGGGGTACTAC",1,39.49,8.84,-2,0.1,1.75,1.06,0,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","ATAGTGGTTGAAATCG",4,26.91,9.05,-1.78,0.32,1.53,1,0.05,">1 nonsynonymous","F99I G166M",2
"lib2","SARS-CoV-2","ATAGTGGTTTAGCTAC",14,147.22,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S69K P133L Q144D T148C P149Q L188T",6
"lib2","SARS-CoV-2","ATAGTGTATCGGTGCT",16,2.08,NA,NA,NA,NA,NA,NA,"stop","N120T Y143K N151F F160*",4
"lib2","SARS-CoV-2","ATAGTGTCTACCCATC",1,27.76,9.39,-1.44,0.23,1.9,1.1,0.02,">1 nonsynonymous","D75Y N107S",2
"lib2","SARS-CoV-2","ATAGTGTTAATCTACT",2,145.48,10.47,-0.37,0.05,2.91,1.08,0,">1 nonsynonymous","L5R D98Y S200Y",3
"lib2","SARS-CoV-2","ATAGTGTTATTACCCT",12,799.13,9.01,-1.83,0.06,1.61,1.05,0,">1 nonsynonymous","A14C N24L V115T",3
"lib2","SARS-CoV-2","ATAGTGTTTTAGGGAC",3,17.97,6.29,-4.55,0.65,1.5,1.31,0.02,">1 nonsynonymous","R25P V37N I104F K114M K128T",5
"lib2","SARS-CoV-2","ATAGTGTTTTTGGTAA",10,82.91,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D90V D137I N151S",3
"lib2","SARS-CoV-2","ATAGTTAAAGACCACC",4,1.72,NA,NA,NA,NA,NA,NA,"stop","D112* L131*",2
"lib2","SARS-CoV-2","ATAGTTAAGAACGAAC",6,3.83,NA,NA,NA,NA,NA,NA,"stop","A42G G51W L57*",3
"lib2","SARS-CoV-2","ATAGTTAAGACGAAAA",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G C31L",2
"lib2","SARS-CoV-2","ATAGTTACTACAACAA",2,17.95,9.43,-1.41,0.26,1.5,1,0.04,">1 nonsynonymous","F12E W23C S41T",3
"lib2","SARS-CoV-2","ATAGTTACTGCGAATA",5,40.8,10.86,0.03,0.05,2.92,1.08,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","ATAGTTAGAGTTTTGC",9,18.55,6,-4.84,2,3,1.02,0,">1 nonsynonymous","A14N F70I P96F T148N",4
"lib2","SARS-CoV-2","ATAGTTAGATTCTAAT",1,37,6.38,-4.46,0.82,1.5,1.3,0.04,">1 nonsynonymous","R127V T201G",2
"lib2","SARS-CoV-2","ATAGTTAGCAGATAAT",4,40.18,10.31,-0.53,0.05,2.88,1,0,">1 nonsynonymous","F47N K56E N120Q T201Y",4
"lib2","SARS-CoV-2","ATAGTTAGCTTTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* V37G T55M D112T F134E T201M",6
"lib2","SARS-CoV-2","ATAGTTAGGTGAAAAT",5,83.78,9.85,-0.98,0.04,2.95,1.05,0,"1 nonsynonymous","N118V",1
"lib2","SARS-CoV-2","ATAGTTATATGAATGA",5,97.49,10.25,-0.59,0.05,2.68,1.09,0,">1 nonsynonymous","N58D Y91W N171V A190T",4
"lib2","SARS-CoV-2","ATAGTTATCAGAAAAG",1,19.51,10.86,0.02,0.06,2.98,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTTCAGAACTTTA",2,67.67,10.31,-0.53,0.07,2.76,1.06,0,">1 nonsynonymous","V37H S43T V65S K128E",4
"lib2","SARS-CoV-2","ATAGTTCAGCCATGGT",5,81.38,9.96,-0.88,0.09,2.34,1.07,0,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","ATAGTTCATCACCCCA",7,104.21,6.43,-4.4,0.34,1.5,1.09,0.01,">1 nonsynonymous","K48Y Y91C N120T",3
"lib2","SARS-CoV-2","ATAGTTCATTGAGGGA",3,40.09,10.78,-0.06,0.05,2.96,1.06,0,">1 nonsynonymous","L5A A33S T201L",3
"lib2","SARS-CoV-2","ATAGTTCCGAAACTCA",2,11.85,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","V71K",1
"lib2","SARS-CoV-2","ATAGTTCTATGTAGTC",4,66.51,10.66,-0.17,0.05,2.93,1.05,0,">1 nonsynonymous","K128M T148I",2
"lib2","SARS-CoV-2","ATAGTTGAAATCGACT",7,107.56,10.81,-0.03,0.03,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTTGAACACGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* A81T",2
"lib2","SARS-CoV-2","ATAGTTGAAGACAAAG",4,48.7,10.25,-0.59,0.08,2.66,1.16,0,">1 nonsynonymous","Y91V T201V",2
"lib2","SARS-CoV-2","ATAGTTGACAACTAAT",6,163.27,10.48,-0.35,0.03,2.86,1.08,0,">1 nonsynonymous","R16G D75K",2
"lib2","SARS-CoV-2","ATAGTTGCGAAATATC",8,49.91,9.94,-0.9,0.09,2.38,1.07,0,">1 nonsynonymous","R136K G146W",2
"lib2","SARS-CoV-2","ATAGTTGGCCGGGGGT",1,48.81,8.98,-1.86,0.27,1.5,1.04,0.03,">1 nonsynonymous","A67V Q84L W106V",3
"lib2","SARS-CoV-2","ATAGTTGTCTGGGCAG",16,122.68,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G83Y G117E G155V",3
"lib2","SARS-CoV-2","ATAGTTGTTTCCCAGT",2,5.55,9.08,-1.76,0.21,2.08,1,0.02,">1 nonsynonymous","F12P P191T P197V",3
"lib2","SARS-CoV-2","ATAGTTTAACAAGCGT",5,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104G N120H L183P",3
"lib2","SARS-CoV-2","ATAGTTTACATTAATA",6,111.16,10.78,-0.06,0.06,2.89,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATAGTTTCTGATATCG",1,17.48,10.49,-0.34,0.09,2.92,1.12,0,">1 nonsynonymous","S41R E141M",2
"lib2","SARS-CoV-2","ATAGTTTCTTAATCAT",5,126.65,10.18,-0.65,0.04,3,1.01,0,">1 nonsynonymous","S43F A67V F156H A190S",4
"lib2","SARS-CoV-2","ATAGTTTGAATACGGT",13,112.99,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5N D98L A105Q N120A F160M",5
"lib2","SARS-CoV-2","ATAGTTTTCAGTTATT",2,60.2,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y119S T148C Y159S",3
"lib2","SARS-CoV-2","ATAGTTTTTATGCACC",8,34.17,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G9Y T15P L60Q A89H N107L V173I",6
"lib2","SARS-CoV-2","ATATAAAAAAAACAAG",19,146.54,7.28,-3.56,0.27,1.5,1.16,0.02,">1 nonsynonymous","V20L V37T L60I F160A",4
"lib2","SARS-CoV-2","ATATAAAAAAAGCTGT",2,16.87,10.14,-0.7,0.15,2.38,1,0.01,"1 nonsynonymous","Y91G",1
"lib2","SARS-CoV-2","ATATAAAAAACTCTCA",4,58.15,6,-4.84,2,1.5,1.12,0.03,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","ATATAAAAAAGCGCGG",2,22.1,9.83,-1.01,0.1,2.57,1.1,0.01,">1 nonsynonymous","S19M T100L V173M",3
"lib2","SARS-CoV-2","ATATAAAAAAGGGGAA",16,155.26,10.7,-0.14,0.03,2.94,1.05,0,">1 nonsynonymous","I2E K132L F160D",3
"lib2","SARS-CoV-2","ATATAAAAAGGAAATA",1,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74T T100P W106S F126A",4
"lib2","SARS-CoV-2","ATATAAAAATCTCCAA",2,31.21,10.72,-0.11,0.08,2.88,1.15,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","ATATAAAACAGTAATC",17,291.81,10.06,-0.77,0.03,2.7,1.02,0,"1 nonsynonymous","S45I",1
"lib2","SARS-CoV-2","ATATAAAACCTTTACG",1,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24K C49N D98R S139V N157G",5
"lib2","SARS-CoV-2","ATATAAAACTGAAATT",6,112.97,10.48,-0.35,0.05,2.89,1.03,0,">1 nonsynonymous","K48H N64S T193I",3
"lib2","SARS-CoV-2","ATATAAAATATAACGG",4,98.08,11.15,0.32,0.05,2.89,1.12,0,">1 nonsynonymous","L60A N171F K198T",3
"lib2","SARS-CoV-2","ATATAAAATGAAGGTC",12,235.75,10.87,0.04,0.05,2.92,1.08,0,"1 nonsynonymous","T3H",1
"lib2","SARS-CoV-2","ATATAAAATTAGGGAC",7,89.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S113F Y121P P191R",3
"lib2","SARS-CoV-2","ATATAAAATTATATGA",22,130.78,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S69R N92V F156M",3
"lib2","SARS-CoV-2","ATATAAAATTGTACCT",1,11.51,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A42W V77G F99D S200V",4
"lib2","SARS-CoV-2","ATATAAAATTTCATAA",4,55.2,10.81,-0.02,0.05,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAAACAAATCGAA",8,172.94,10.89,0.05,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAAACAACTCATG",20,205.22,6,-4.84,2,3,1.23,0,">1 nonsynonymous","P7V I72S D90P D98F",4
"lib2","SARS-CoV-2","ATATAAACGGAAAAGT",9,50.43,10.77,-0.07,0.07,2.8,1.08,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","ATATAAACGTGCACTT",14,179.82,6.54,-4.29,0.29,1.5,1.12,0.01,"1 nonsynonymous","P177V",1
"lib2","SARS-CoV-2","ATATAAACTCAAAGAG",1,27.22,7.7,-3.14,0.32,1.5,1.15,0.03,"1 nonsynonymous","L131G",1
"lib2","SARS-CoV-2","ATATAAACTCTTAAAA",2,19.36,8.7,-2.14,0.09,2.9,1.09,0.01,">1 nonsynonymous","D97N E141T F156S T170K Y178F",5
"lib2","SARS-CoV-2","ATATAAAGAAAACAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","R16* S113N",2
"lib2","SARS-CoV-2","ATATAAAGAAGCGAAT",5,149.09,10.53,-0.31,0.03,2.89,1.07,0,">1 nonsynonymous","A81S N151L",2
"lib2","SARS-CoV-2","ATATAAAGATAATACT",3,96.11,9.13,-1.71,0.04,2.9,1.09,0,"1 nonsynonymous","G166K",1
"lib2","SARS-CoV-2","ATATAAAGGCCCGCTT",3,27.61,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D34K R78H P82E L95F",4
"lib2","SARS-CoV-2","ATATAAAGTGATTAGG",6,24.97,6,-4.84,1.08,3,1.18,0.01,">1 nonsynonymous","A18R V52I I80M C102Y K128A A192F",6
"lib2","SARS-CoV-2","ATATAAATAAACGCGT",7,29.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T15I G86M F134G I142H V153Y",5
"lib2","SARS-CoV-2","ATATAAATAACCGCAG",1,34.72,6.06,-4.78,0.51,3,1.06,0.01,">1 nonsynonymous","K128Q C150V",2
"lib2","SARS-CoV-2","ATATAAATAATACACC",6,49.8,10.97,0.14,0.05,2.93,1.07,0,">1 nonsynonymous","N130A P197M",2
"lib2","SARS-CoV-2","ATATAAATACACTGAC",3,15.82,8.88,-1.95,0.23,2.25,1,0.01,">1 nonsynonymous","S53A Y165V",2
"lib2","SARS-CoV-2","ATATAAATATAAGATC",5,0.04,NA,NA,NA,NA,NA,NA,"stop","V52I A67I G74S Y143* Y165M",5
"lib2","SARS-CoV-2","ATATAAATATTCTGTA",4,53.15,10.11,-0.73,0.04,3,1.01,0,">1 nonsynonymous","C61S P169L K198G",3
"lib2","SARS-CoV-2","ATATAAATCCAACATT",3,24.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37K E76D R136I C150T",4
"lib2","SARS-CoV-2","ATATAAATCCGAACTA",8,90.53,10.69,-0.14,0.05,2.94,1.06,0,">1 nonsynonymous","P54T S139G",2
"lib2","SARS-CoV-2","ATATAAATGATAAAAG",2,14.8,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G51M L95R P149I",3
"lib2","SARS-CoV-2","ATATAAATTCCGCTTA",4,0.15,NA,NA,NA,NA,NA,NA,"stop","C31* Y93K A105R C150Y",4
"lib2","SARS-CoV-2","ATATAAATTGAACCTA",7,176.74,10.79,-0.04,0.03,2.95,1.07,0,"1 nonsynonymous","I2D",1
"lib2","SARS-CoV-2","ATATAAATTGAAGATT",7,93.17,10.87,0.03,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAAATTTACGGAC",6,157.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K26T G172R R179T",3
"lib2","SARS-CoV-2","ATATAACAAACGTAGA",2,37.78,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G83H I88P L131M N151S F156L A190F G196L",7
"lib2","SARS-CoV-2","ATATAACAAGCTTTAC",1,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S I88V V180E",3
"lib2","SARS-CoV-2","ATATAACACACTTACA",11,145.59,10.34,-0.5,0.04,2.96,1.03,0,">1 nonsynonymous","C6T S129E",2
"lib2","SARS-CoV-2","ATATAACACGCCTAGC",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y A33R R127E E141R K198Y",5
"lib2","SARS-CoV-2","ATATAACCAAACAGAA",2,2.21,NA,NA,NA,NA,NA,NA,"stop","C61F Y143* T201L",3
"lib2","SARS-CoV-2","ATATAACCCACAAATA",12,83.91,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C158W F167H T201W",3
"lib2","SARS-CoV-2","ATATAACCCCAGAACT",1,25.02,11.02,0.18,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAACCGCGAGGTA",3,18.5,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","D59V D68P",2
"lib2","SARS-CoV-2","ATATAACCTGACCGCG",1,71.08,10.83,-0.01,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAACCTGCTCCCG",4,87.88,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N107A L125Y Y175C",3
"lib2","SARS-CoV-2","ATATAACCTTGTTGTG",15,6.16,NA,NA,NA,NA,NA,NA,"stop","L60D T85* P133*",3
"lib2","SARS-CoV-2","ATATAACGACATAATA",8,72.61,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T55N N64L G86W R124H K132T T170S",6
"lib2","SARS-CoV-2","ATATAACGAGTTAAGC",3,70.04,10.26,-0.57,0.05,2.77,1.05,0,">1 nonsynonymous","I28F C102A",2
"lib2","SARS-CoV-2","ATATAACGCACATTTA",4,61.99,8.09,-2.74,0.25,1.5,1.09,0.03,">1 nonsynonymous","K128I Y165K",2
"lib2","SARS-CoV-2","ATATAACGCCAAGAAT",15,68.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y50L Y119T Y165L",3
"lib2","SARS-CoV-2","ATATAACGTAATCAAT",1,141.16,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I142R F156Y P177E",3
"lib2","SARS-CoV-2","ATATAACTACTGTTTT",2,13.44,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","A14V C158S",2
"lib2","SARS-CoV-2","ATATAACTATCACCAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M C61H G74C D98Y",4
"lib2","SARS-CoV-2","ATATAACTCAAAACAA",9,123.3,10.73,-0.11,0.06,2.83,1.09,0,">1 nonsynonymous","V37L Y66T",2
"lib2","SARS-CoV-2","ATATAACTGGAAGCTT",1,30.48,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","Q79K K94G N107L",3
"lib2","SARS-CoV-2","ATATAACTGGAGCAAA",1,24.34,9.55,-1.28,0.1,2.17,1,0,">1 nonsynonymous","V11S Y123M",2
"lib2","SARS-CoV-2","ATATAAGACCTTCCAA",2,52.48,10.79,-0.05,0.1,2.86,1.14,0,">1 nonsynonymous","L5K K198S",2
"lib2","SARS-CoV-2","ATATAAGAGTACTATG",16,130.25,9.74,-1.09,0.05,2.11,1.07,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","ATATAAGATAATTCTG",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G R136M E186D",3
"lib2","SARS-CoV-2","ATATAAGCCTAAAATT",5,79.91,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F12E R25Y",2
"lib2","SARS-CoV-2","ATATAAGCTAATACAA",1,34.74,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","I2K F44V C102V Q176G",4
"lib2","SARS-CoV-2","ATATAAGGAAAATTCC",7,3.04,NA,NA,NA,NA,NA,NA,"stop","N40K C102* G116E E154V L162S E186I",6
"lib2","SARS-CoV-2","ATATAAGGAAATGTCG",5,6.03,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3K E10V A42F D97I F167L",5
"lib2","SARS-CoV-2","ATATAAGGCCACATTC",2,20.75,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G152V Y175K",2
"lib2","SARS-CoV-2","ATATAAGTGAAATTAT",3,59.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11Q N40S D90L D98Q I142S",5
"lib2","SARS-CoV-2","ATATAATAAGTAGAGA",1,8.78,10.65,-0.18,0.12,2.93,1.1,0,"1 nonsynonymous","F8M",1
"lib2","SARS-CoV-2","ATATAATAATAGCTTT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E A67R N157A T201R",4
"lib2","SARS-CoV-2","ATATAATACCCTTTGA",3,54.11,10.83,0,0.05,2.98,1.03,0,"1 nonsynonymous","F134G",1
"lib2","SARS-CoV-2","ATATAATACTTTCCTT",4,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P C102R T201I",3
"lib2","SARS-CoV-2","ATATAATAGCAAGACT",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N R127V T140E E154T",4
"lib2","SARS-CoV-2","ATATAATATGTACCGC",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P L125N F160E",3
"lib2","SARS-CoV-2","ATATAATATTCCTTTT",5,12.23,6,-4.84,1.13,3,1.26,0.01,"1 nonsynonymous","D137K",1
"lib2","SARS-CoV-2","ATATAATCAAACATAA",9,71.54,6.2,-4.64,0.77,1.5,1.21,0.02,">1 nonsynonymous","C61I G86E P149R Y178L",4
"lib2","SARS-CoV-2","ATATAATCAGCGTCAC",3,0,NA,NA,NA,NA,NA,NA,"stop","V37I F44* Y119F",3
"lib2","SARS-CoV-2","ATATAATCCTGAGCTT",21,3.7,NA,NA,NA,NA,NA,NA,"stop","T3V G116*",2
"lib2","SARS-CoV-2","ATATAATCTAAAACGT",3,24.49,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C61G E76F A89R K128V",4
"lib2","SARS-CoV-2","ATATAATGACGGACTT",4,11.65,10.7,-0.13,0.09,2.86,1.18,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","ATATAATGCAATACAA",1,16.01,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","W23M L95P Y175K",3
"lib2","SARS-CoV-2","ATATAATGGCAAGCTG",8,77.21,9.97,-0.87,0.06,2.83,1.13,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","ATATAATGGCGAATAT",6,41.6,10.26,-0.57,0.04,3,1.03,0,">1 nonsynonymous","K87S N110Y",2
"lib2","SARS-CoV-2","ATATAATGTCTGTACC",3,115.1,8.41,-2.42,0.13,2.17,1.07,0.01,">1 nonsynonymous","T63R S113K T148L",3
"lib2","SARS-CoV-2","ATATAATGTTTGACAC",12,3.86,NA,NA,NA,NA,NA,NA,"stop","S43P F167*",2
"lib2","SARS-CoV-2","ATATAATTAACAGTTT",4,0.28,NA,NA,NA,NA,NA,NA,"stop","F12S R25F S41* D68W V77C",5
"lib2","SARS-CoV-2","ATATAATTAATGACCG",1,120.19,9.87,-0.97,0.03,2.95,1.06,0,">1 nonsynonymous","R27V K87E",2
"lib2","SARS-CoV-2","ATATAATTACAATGAG",11,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L F8C",2
"lib2","SARS-CoV-2","ATATAATTATAACTGC",7,54.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8K F70Y",2
"lib2","SARS-CoV-2","ATATAATTCTAATATA",9,25.76,6.07,-4.77,0.69,3,1.1,0.01,">1 nonsynonymous","C49A S113N E135N",3
"lib2","SARS-CoV-2","ATATAATTCTCACCGT",5,68.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F47Y V77K G83T Y119L R136I T148D",6
"lib2","SARS-CoV-2","ATATAATTCTTTGAGC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119K A145F",2
"lib2","SARS-CoV-2","ATATAATTGAATTTAA",1,23.47,10.2,-0.64,0.11,2.71,1.05,0,">1 nonsynonymous","F17Y S41G N64S",3
"lib2","SARS-CoV-2","ATATAATTGACTAAAA",2,9.22,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","I88E T100S",2
"lib2","SARS-CoV-2","ATATAATTGTTATAAA",5,21.47,6.68,-4.15,0.3,1.5,1.13,0.01,">1 nonsynonymous","L95Q P197R",2
"lib2","SARS-CoV-2","ATATAATTTATCTACC",3,93.38,10.87,0.04,0.06,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATAATTTGCTACAG",12,70.52,10.02,-0.81,0.06,2.58,1.07,0,">1 nonsynonymous","F8V S184Y",2
"lib2","SARS-CoV-2","ATATACAACAAACAAA",10,22.92,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N13Y K87D Y121M P161I",4
"lib2","SARS-CoV-2","ATATACAAGCGTGACT",9,168.37,10.87,0.03,0.05,2.88,1.13,0,"1 nonsynonymous","S184T",1
"lib2","SARS-CoV-2","ATATACAATCAAAAAA",1,26.36,10.36,-0.47,0.06,2.85,1.12,0,">1 nonsynonymous","F99W V180I",2
"lib2","SARS-CoV-2","ATATACACACTACTCG",14,114.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14D F44N T55A F70H S139D",5
"lib2","SARS-CoV-2","ATATACACAGTGAACG",7,59.13,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G101F N171K",2
"lib2","SARS-CoV-2","ATATACACCCTTAACG",6,0,NA,NA,NA,NA,NA,NA,"stop","P7I A22R I80R D97H N109* R124K Q176L",7
"lib2","SARS-CoV-2","ATATACACCCTTTGAT",8,106.95,10.97,0.13,0.05,2.9,1.09,0,">1 nonsynonymous","L122T F160R",2
"lib2","SARS-CoV-2","ATATACACGTTAAGCC",9,0.44,NA,NA,NA,NA,NA,NA,"stop","N4* Y119M R127H G146F",4
"lib2","SARS-CoV-2","ATATACACTATACTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* A22L P82E I142K",4
"lib2","SARS-CoV-2","ATATACAGGACCCACG",2,80.5,8.1,-2.74,0.22,1.5,1.14,0.02,">1 nonsynonymous","K26R Y35R Q84F L122N",4
"lib2","SARS-CoV-2","ATATACATATACTACC",2,48.68,10.78,-0.06,0.04,3,1.02,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","ATATACATATTGCGGA",4,89.69,8.99,-1.85,0.09,2.25,1.09,0,">1 nonsynonymous","I104S Y119R",2
"lib2","SARS-CoV-2","ATATACATCTGCGCAT",1,35.87,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","Y91C D137M Q176L",3
"lib2","SARS-CoV-2","ATATACATCTTGAAAA",4,1.21,NA,NA,NA,NA,NA,NA,"stop","N92W N120F Y143* T170K",4
"lib2","SARS-CoV-2","ATATACATGCTCTTAC",10,105.64,9.24,-1.59,0.08,1.61,1.09,0,">1 nonsynonymous","R136G G146A",2
"lib2","SARS-CoV-2","ATATACATTTTATGCC",1,9.16,10.77,-0.07,0.06,3,1,0,"1 nonsynonymous","H189R",1
"lib2","SARS-CoV-2","ATATACCAAAAGAAAG",6,137.8,10.7,-0.14,0.03,2.94,1.05,0,">1 nonsynonymous","Q84R N130I",2
"lib2","SARS-CoV-2","ATATACCAAACCCATA",2,21.95,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C6V K94D G101V S139H",4
"lib2","SARS-CoV-2","ATATACCACGCTCGAT",12,89.92,10.82,-0.02,0.05,2.92,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATACCACTAACGAC",1,14.59,10.5,-0.33,0.09,2.88,1.11,0.01,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","ATATACCAGCGTTCCG",3,3.13,NA,NA,NA,NA,NA,NA,"stop","I2T Y91* P169H",3
"lib2","SARS-CoV-2","ATATACCAGTTACACA",6,95.31,10.87,0.04,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATACCATACGAGAT",3,67.09,10.87,0.04,0.05,2.92,1.1,0,">1 nonsynonymous","L122M S200F",2
"lib2","SARS-CoV-2","ATATACCCCAGTTAAA",4,1.18,NA,NA,NA,NA,NA,NA,"stop","W23Q V32A W106*",3
"lib2","SARS-CoV-2","ATATACCCCGCAAGTT",6,22.51,8.28,-2.55,0.37,1.5,1,0.06,">1 nonsynonymous","A14E R25A",2
"lib2","SARS-CoV-2","ATATACCCGAAAAAGT",8,42.71,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","K114F P133S C150Y",3
"lib2","SARS-CoV-2","ATATACCTAATGGGAC",4,28.73,9.44,-1.4,0.16,1.9,1.12,0.01,">1 nonsynonymous","I2P F12C A33T",3
"lib2","SARS-CoV-2","ATATACCTATCAAAAC",6,0.5,NA,NA,NA,NA,NA,NA,"stop","C6N T63* A81L T85F V115C N157R",6
"lib2","SARS-CoV-2","ATATACCTCAAAATCG",8,32.29,10.92,0.08,0.06,2.98,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATACCTCACCCGTA",1,18.04,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","G117H D137C S164W",3
"lib2","SARS-CoV-2","ATATACCTGAAAAACT",6,1.76,NA,NA,NA,NA,NA,NA,"stop","D34H C61L D98Q D137L G172* K199*",6
"lib2","SARS-CoV-2","ATATACGAAAACCTCA",1,13.89,8.87,-1.96,0.17,1.7,1.11,0.02,">1 nonsynonymous","W106N T201L",2
"lib2","SARS-CoV-2","ATATACGAACGATTAT",10,79.27,8.4,-2.44,0.08,2.59,1.05,0,">1 nonsynonymous","A14I Y119R N157G Q163F",4
"lib2","SARS-CoV-2","ATATACGACATCTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A18G S29R S69L W106*",4
"lib2","SARS-CoV-2","ATATACGAGCTGAGCA",2,27.34,10.18,-0.65,0.06,2.92,1,0,">1 nonsynonymous","V103I E154C",2
"lib2","SARS-CoV-2","ATATACGATCCCTCGA",7,30.88,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41A K56C I88N F126P",4
"lib2","SARS-CoV-2","ATATACGCATTCAATT",8,0.56,NA,NA,NA,NA,NA,NA,"stop","A14M Y35L L60* Q163H",4
"lib2","SARS-CoV-2","ATATACGCCACTGGTT",11,335.76,9.52,-1.32,0.04,2.9,1.08,0,">1 nonsynonymous","F62I Y143V",2
"lib2","SARS-CoV-2","ATATACGCCTTTTATC",8,71.67,10.39,-0.44,0.04,3,1.02,0,">1 nonsynonymous","G83C K114E N120D",3
"lib2","SARS-CoV-2","ATATACGCGAAATGAA",3,18.8,10.42,-0.42,0.14,2.68,1,0.01,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","ATATACGCGTGAACCG",1,198.56,8.79,-2.04,0.05,2.67,1.12,0,">1 nonsynonymous","N13E K56N Q168V",3
"lib2","SARS-CoV-2","ATATACGTAATACCGG",1,7.38,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N58K N107H Y123C P149I",4
"lib2","SARS-CoV-2","ATATACGTAGAATCTA",4,27.97,10.01,-0.83,0.08,2.41,1,0,">1 nonsynonymous","P7S V32Y S43F G51M",4
"lib2","SARS-CoV-2","ATATACTAATCAGAAA",4,18.2,9.86,-0.98,0.12,2.31,1.07,0.01,">1 nonsynonymous","S36K D90V T201R",3
"lib2","SARS-CoV-2","ATATACTACAATAGGT",3,58.61,10.09,-0.74,0.1,2.52,1.04,0,"1 nonsynonymous","I80M",1
"lib2","SARS-CoV-2","ATATACTACGGACATC",1,4.77,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATATACTAGCAATCCG",13,347.16,10.81,-0.02,0.05,2.92,1.07,0,"1 nonsynonymous","S129A",1
"lib2","SARS-CoV-2","ATATACTATAACTCAT",4,20.47,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V20Y Y35T F99R N151M G155F",5
"lib2","SARS-CoV-2","ATATACTATAACTGTA",2,36.52,9.32,-1.51,0.05,2.96,1.06,0,"1 nonsynonymous","G117T",1
"lib2","SARS-CoV-2","ATATACTATACACTAA",8,139.97,8.13,-2.7,0.18,1.69,1.13,0.01,">1 nonsynonymous","S29K K48T N107L P197R",4
"lib2","SARS-CoV-2","ATATACTCATGTATTA",2,26.38,10.67,-0.17,0.1,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATACTCCCACATAT",2,5.75,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","S41Y G74S V103W G117S K128W",5
"lib2","SARS-CoV-2","ATATACTGCCTACCAA",4,56.25,9.28,-1.55,0.06,2.84,1.07,0,">1 nonsynonymous","G74H L187F",2
"lib2","SARS-CoV-2","ATATACTGGAGTGACG",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L C61R",2
"lib2","SARS-CoV-2","ATATACTGTTCCTGTA",1,27.73,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6W A18I P96S V103T",4
"lib2","SARS-CoV-2","ATATACTTAACCGATA",3,68.66,10.67,-0.17,0.03,2.96,1.06,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","ATATACTTACGAGAAT",20,1005.92,9.49,-1.35,0.04,2.78,1.06,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","ATATACTTCATATGAT",5,8.47,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","N4L T15Y I88L V182N",4
"lib2","SARS-CoV-2","ATATACTTTTAATCCG",3,20.49,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","K87Y V103L C150R L162V",4
"lib2","SARS-CoV-2","ATATAGAAAGGTGTTC",1,24.71,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6Y S36Q N110V R124T T140I",5
"lib2","SARS-CoV-2","ATATAGAACCCCCCTA",2,25.97,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L5N A33P C61T G101D T201A",5
"lib2","SARS-CoV-2","ATATAGAACGGGCCTA",2,4.08,NA,NA,NA,NA,NA,NA,"stop","Y39* V52R N120I",3
"lib2","SARS-CoV-2","ATATAGAAGAATACGT",4,21.37,10.84,0.01,0.03,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATAGAAGACACTAC",9,115.9,10.57,-0.26,0.03,2.97,1.01,0,"1 nonsynonymous","T85W",1
"lib2","SARS-CoV-2","ATATAGAAGTAGAGAC",1,29.38,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","G9M T55N Y93C S129H L162N",5
"lib2","SARS-CoV-2","ATATAGAATAAATCCT",1,18.83,10.84,0,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAGACAAGAAAGG",9,60.34,10.86,0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAGACCCAGGAGG",2,40.34,8.67,-2.17,0.08,2.83,1.12,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","ATATAGACGAATTCTC",7,41.24,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I28R A42T G86W",3
"lib2","SARS-CoV-2","ATATAGACGAGGCAGC",11,4.91,NA,NA,NA,NA,NA,NA,"stop","Y123S R127*",2
"lib2","SARS-CoV-2","ATATAGACTTAAATAG",8,70.6,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y50N G146L N157F",3
"lib2","SARS-CoV-2","ATATAGAGAACTGCAG",1,22.43,11,0.16,0.09,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAGAGAAGACGAG",1,30.36,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F62T A89V N107Q P133L",4
"lib2","SARS-CoV-2","ATATAGAGGATATGGT",7,64.02,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S36I V77E A105R K128H",4
"lib2","SARS-CoV-2","ATATAGAGTACAATAC",7,30.25,6.85,-3.98,0.25,1.5,1.13,0.01,">1 nonsynonymous","T55D C61L K94P",3
"lib2","SARS-CoV-2","ATATAGAGTGCCAATC",1,24.87,8.3,-2.54,0.19,2.63,1,0.01,">1 nonsynonymous","R27A K114L P149I Y175N",4
"lib2","SARS-CoV-2","ATATAGATTATTGAAT",12,101.59,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T85D T148P Q176L",3
"lib2","SARS-CoV-2","ATATAGATTTTACACA",1,8.4,9.03,-1.81,0.46,1.81,1,0.07,">1 nonsynonymous","A81M D112I H189P",3
"lib2","SARS-CoV-2","ATATAGCATACGAATA",3,15.88,10.17,-0.66,0.07,2.95,1.04,0,">1 nonsynonymous","L5F E10T T15E N120Q F156P",5
"lib2","SARS-CoV-2","ATATAGCATCTCCAAG",1,27.85,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","K26L T46V T63F Y91L I104V E141R",6
"lib2","SARS-CoV-2","ATATAGCATGCAACTA",5,115.81,9.12,-1.72,0.13,1.65,1.07,0.01,"1 nonsynonymous","G86H",1
"lib2","SARS-CoV-2","ATATAGCATGTAAATA",6,1.34,NA,NA,NA,NA,NA,NA,"stop","S43W I72K I88C W106* T140I G146Y T201S",7
"lib2","SARS-CoV-2","ATATAGCCCACAAGTA",3,23.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A22N C61R Y91C V115L P161F",5
"lib2","SARS-CoV-2","ATATAGCCCACACCGG",6,35.6,9.95,-0.89,0.08,2.78,1,0,">1 nonsynonymous","Y178L C195F",2
"lib2","SARS-CoV-2","ATATAGCCCTAAGGGT",2,37.6,8.5,-2.33,0.42,1.5,1,0.05,"1 nonsynonymous","R25I",1
"lib2","SARS-CoV-2","ATATAGCCGACGTAGT",5,416.42,9.15,-1.68,0.07,2.48,1.05,0,">1 nonsynonymous","N1I V37P G146N",3
"lib2","SARS-CoV-2","ATATAGCGACAGAACG",5,42.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5N C49M V115R S139G F167E V173R",6
"lib2","SARS-CoV-2","ATATAGCGACTTCCGA",11,9.1,9.73,-1.11,0.27,2.27,1.07,0.03,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","ATATAGCGCAATCCGT",2,65.74,10.81,-0.03,0.05,2.94,1.07,0,">1 nonsynonymous","N130T P149S",2
"lib2","SARS-CoV-2","ATATAGCGCCACGGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28* D34V C49R T55G F62S",5
"lib2","SARS-CoV-2","ATATAGCGCGACAGAG",7,77.88,10.48,-0.36,0.03,2.87,1.08,0,">1 nonsynonymous","N58F V173I",2
"lib2","SARS-CoV-2","ATATAGCGTGGGCGCA",7,87.29,6.3,-4.53,0.75,1.5,1.28,0.03,">1 nonsynonymous","L60D K94V S129I",3
"lib2","SARS-CoV-2","ATATAGCGTTAACAAA",1,6.35,NA,NA,NA,NA,NA,NA,"stop","W23* S45V P96R G101N",4
"lib2","SARS-CoV-2","ATATAGCTGCATAATA",4,80.98,10.86,0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATAGGAAAATTCTC",8,75.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86L Q144F C150S",3
"lib2","SARS-CoV-2","ATATAGGAAATAAAAG",5,23.19,9.72,-1.12,0.1,2.59,1.05,0.01,">1 nonsynonymous","C6L Y39H",2
"lib2","SARS-CoV-2","ATATAGGAAATCCATC",1,55.46,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L5I Y93P T148H",3
"lib2","SARS-CoV-2","ATATAGGAGGTGGTAA",2,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S N151L Y159I",3
"lib2","SARS-CoV-2","ATATAGGCCAGGCGGA",4,102.92,10.73,-0.11,0.04,2.91,1.1,0,"1 nonsynonymous","N110E",1
"lib2","SARS-CoV-2","ATATAGGTCCCTAACA",6,16.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N24S A33C P82M L183S",4
"lib2","SARS-CoV-2","ATATAGGTGAAGCGTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109S Y165G",2
"lib2","SARS-CoV-2","ATATAGGTTACTGAAA",8,71.74,10.77,-0.07,0.04,2.95,1.05,0,"1 nonsynonymous","S43W",1
"lib2","SARS-CoV-2","ATATAGGTTTCCAAAT",10,87.71,10.78,-0.05,0.04,2.93,1.07,0,">1 nonsynonymous","D97I S129T",2
"lib2","SARS-CoV-2","ATATAGTAAGACAGAC",16,180.16,10.81,-0.02,0.04,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATAGTAATAGACGA",2,17.61,8.89,-1.95,0.22,1.5,1,0.02,">1 nonsynonymous","N64G F99H G152D K199Y",4
"lib2","SARS-CoV-2","ATATAGTAATATCCCG",4,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D S36Y",2
"lib2","SARS-CoV-2","ATATAGTACTATACTA",8,20.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3K G83E T100L R127K Q163L",5
"lib2","SARS-CoV-2","ATATAGTACTCAATTA",5,1.26,NA,NA,NA,NA,NA,NA,"stop","N4A V37G Q163*",3
"lib2","SARS-CoV-2","ATATAGTAGAAATATC",10,0.87,NA,NA,NA,NA,NA,NA,"stop","L5H P96Y V103N F167* E186S",5
"lib2","SARS-CoV-2","ATATAGTAGTTATACT",6,128.74,10.71,-0.12,0.04,2.94,1.07,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","ATATAGTATAAAAAGC",6,68.94,10.76,-0.08,0.04,2.94,1.02,0,">1 nonsynonymous","F62S P149D",2
"lib2","SARS-CoV-2","ATATAGTATGTCATCA",12,98.09,6.03,-4.8,0.74,1.5,1.15,0.01,">1 nonsynonymous","V11R G83C S113R",3
"lib2","SARS-CoV-2","ATATAGTCAGTGCCTA",8,13.1,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C102G Y119H",2
"lib2","SARS-CoV-2","ATATAGTCTAATGAAC",5,63.15,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y35K I80L A89R F99L C150L",5
"lib2","SARS-CoV-2","ATATAGTGAATGCGCT",9,79.99,8.78,-2.05,0.05,2.17,1.06,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","ATATAGTGCCAGAATC",13,78.48,6.23,-4.61,0.57,1.5,1.21,0.01,">1 nonsynonymous","Y50V Y123L E141K",3
"lib2","SARS-CoV-2","ATATAGTGCCAGTACG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F8Q A18Y R73* L131E G174V",5
"lib2","SARS-CoV-2","ATATAGTTAACGCATG",4,26.39,9.49,-1.35,0.14,1.79,1.07,0.01,">1 nonsynonymous","G86S L187F",2
"lib2","SARS-CoV-2","ATATAGTTCAACAAAA",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q T15M N58Y N157Y",4
"lib2","SARS-CoV-2","ATATAGTTCCATGGCA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","ATATAGTTCCTGGCGA",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y P133L",2
"lib2","SARS-CoV-2","ATATATAAAATGCCGT",1,10.57,10.4,-0.43,0.1,2.97,1.07,0,">1 nonsynonymous","A42Q C61N",2
"lib2","SARS-CoV-2","ATATATAAACACATCT",11,221.77,8.12,-2.72,0.12,2.61,1.06,0.01,">1 nonsynonymous","V37S N157P",2
"lib2","SARS-CoV-2","ATATATAAAGAAAAGG",3,17.73,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y35F T100P K132I F156L V182L K199R",6
"lib2","SARS-CoV-2","ATATATAACATCAGTA",1,54.45,10.88,0.05,0.04,2.92,1.08,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","ATATATAAGGGGAGGT",6,55.36,9.75,-1.09,0.18,1.5,1.05,0.02,">1 nonsynonymous","P7L C61R V103T",3
"lib2","SARS-CoV-2","ATATATAATACTCATG",1,30.99,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","I2L R27W V37G S45P P96S F160L",6
"lib2","SARS-CoV-2","ATATATAATAGGGAAA",2,61.8,10.73,-0.11,0.05,2.91,1.1,0,"1 nonsynonymous","N64F",1
"lib2","SARS-CoV-2","ATATATAATGGCACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M L111V Y123T Y175E",4
"lib2","SARS-CoV-2","ATATATACAACGATCA",3,12.69,7.36,-3.48,0.14,1.5,1.07,0.01,">1 nonsynonymous","L60P Q84T V103I G155W",4
"lib2","SARS-CoV-2","ATATATAGAAAACGCG",1,12.95,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F8Y W106C N107H L122Y",4
"lib2","SARS-CoV-2","ATATATAGCAGACAAG",2,49.73,10.76,-0.07,0.08,2.84,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATATAGCCGGGTCT",2,7.39,6,-4.84,2,3,1.14,0.07,">1 nonsynonymous","T55S G83A R124L L131R F167R",5
"lib2","SARS-CoV-2","ATATATAGCTAGGACC",5,78.69,10.76,-0.07,0.06,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATATAGGCCTCTTC",4,29.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N58S A105R V182K",3
"lib2","SARS-CoV-2","ATATATAGTCCCGCAG",10,115.78,10.11,-0.72,0.05,2.89,1.01,0,">1 nonsynonymous","C6D F62L F134W",3
"lib2","SARS-CoV-2","ATATATATAAAAATTA",4,38.21,10.31,-0.52,0.07,2.7,1.03,0,">1 nonsynonymous","L5K L57N F62Y",3
"lib2","SARS-CoV-2","ATATATATACTAAAGA",7,166.01,10.38,-0.45,0.03,2.86,1.1,0,">1 nonsynonymous","D98I T148N",2
"lib2","SARS-CoV-2","ATATATATACTAAATT",4,139.02,10.58,-0.26,0.05,2.89,1.06,0,">1 nonsynonymous","R136H S200Y",2
"lib2","SARS-CoV-2","ATATATATAGCCTCAA",2,30.86,6,-4.84,1.12,3,1.13,0,">1 nonsynonymous","F12G D90C",2
"lib2","SARS-CoV-2","ATATATATCATAAATA",1,14.86,10.66,-0.18,0.08,3,1,0.01,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","ATATATATCCAGGTTG",3,35.73,10.25,-0.59,0.09,2.81,1.07,0,">1 nonsynonymous","I2T K94N",2
"lib2","SARS-CoV-2","ATATATATCGTAGTTT",7,21.56,6.3,-4.54,0.87,1.5,1.1,0.05,">1 nonsynonymous","S45Y D90P P96Q D137L",4
"lib2","SARS-CoV-2","ATATATATCGTCAAAG",1,23,6,-4.84,2,3,1.09,0,">1 nonsynonymous","I88F Y123C",2
"lib2","SARS-CoV-2","ATATATATCTGCACTG",3,12.18,6,-4.84,2,3,1.08,0,">1 nonsynonymous","D98L A105V T170V",3
"lib2","SARS-CoV-2","ATATATATGTCGATCA",9,55.64,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9K L38M T85V D98H N120Q T140G N151R F167T",8
"lib2","SARS-CoV-2","ATATATATTAAGAAGG",1,8.9,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","F99V F185C",2
"lib2","SARS-CoV-2","ATATATCAATTATTAC",7,50.65,9.79,-1.05,0.05,2.72,1.05,0,">1 nonsynonymous","K56W G155E",2
"lib2","SARS-CoV-2","ATATATCACAATGGGG",3,1.97,NA,NA,NA,NA,NA,NA,"stop","N4K T55F S69* V77F A145M",5
"lib2","SARS-CoV-2","ATATATCACTGATTAT",1,3.09,NA,NA,NA,NA,NA,NA,"stop","I2P S29K C102S D112* T201V",5
"lib2","SARS-CoV-2","ATATATCAGAGAAAAG",2,34.92,10.05,-0.79,0.09,2.68,1.05,0,">1 nonsynonymous","N58L T100W",2
"lib2","SARS-CoV-2","ATATATCAGGGGAATT",7,54.94,6.24,-4.59,0.69,1.5,1.13,0.02,">1 nonsynonymous","L5G I88R",2
"lib2","SARS-CoV-2","ATATATCATACAAGAG",7,0.49,NA,NA,NA,NA,NA,NA,"stop","L5S W23* Y121L",3
"lib2","SARS-CoV-2","ATATATCCACAGACGG",21,288.7,10.84,0.01,0.05,2.83,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATATCCAGGATTAA",2,18.39,10.91,0.07,0.08,3,1.01,0,">1 nonsynonymous","A42Q N64Y",2
"lib2","SARS-CoV-2","ATATATCTCAATTTTT",1,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151L L187Q",2
"lib2","SARS-CoV-2","ATATATCTCTACTTCT",1,45.47,9.65,-1.19,0.07,2.45,1.03,0,">1 nonsynonymous","N1T K56R Y121A N130I",4
"lib2","SARS-CoV-2","ATATATCTCTTGGACA",4,23.14,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N92S F167C H189Q",3
"lib2","SARS-CoV-2","ATATATCTTCAAAGGT",1,22.75,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","F8S L60K N107F",3
"lib2","SARS-CoV-2","ATATATGAACAGGTTT",8,110.25,9.61,-1.23,0.04,2.84,1.07,0,">1 nonsynonymous","L5W N107E",2
"lib2","SARS-CoV-2","ATATATGAGCAATAAA",2,43.53,10.82,-0.02,0.07,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATATGAGCCAATAA",5,0,NA,NA,NA,NA,NA,NA,"stop","G9P K94E Y121* Y159P",4
"lib2","SARS-CoV-2","ATATATGAGTGTCCCA",4,54.98,10.71,-0.12,0.03,3,1,0,"1 nonsynonymous","A33C",1
"lib2","SARS-CoV-2","ATATATGATTCAATAA",8,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51W G86R N120F N130V Q168S",5
"lib2","SARS-CoV-2","ATATATGCAACTTTAC",5,131.04,10.7,-0.14,0.07,2.9,1.11,0,">1 nonsynonymous","E10S K56D",2
"lib2","SARS-CoV-2","ATATATGCAGTCAGGA",8,28.58,7.93,-2.9,0.36,1.5,1.08,0.03,">1 nonsynonymous","G86T F134H",2
"lib2","SARS-CoV-2","ATATATGCATAGTCAA",2,25.51,10.69,-0.15,0.05,3,1,0,">1 nonsynonymous","L60N Q168R",2
"lib2","SARS-CoV-2","ATATATGCGAAAACAG",3,26.38,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","K56G L95E S139T",3
"lib2","SARS-CoV-2","ATATATGCTTTAGCAT",5,147.42,10.62,-0.22,0.03,2.9,1.07,0,">1 nonsynonymous","V32L K132T L188I",3
"lib2","SARS-CoV-2","ATATATGTGAGTACTG",10,4.6,NA,NA,NA,NA,NA,NA,"stop","V11* K132W P169L",3
"lib2","SARS-CoV-2","ATATATGTGCTCCGTA",1,26.09,10.8,-0.04,0.05,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATATTAAACGTGCA",2,60.01,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2L E10G N64A Q84G D97S Y159C",6
"lib2","SARS-CoV-2","ATATATTAACACACTT",8,112.5,10.71,-0.13,0.05,2.95,1.06,0,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","ATATATTAATAAAAAC",1,54.51,10.36,-0.48,0.04,3,1.03,0,">1 nonsynonymous","S45T N64I A190S",3
"lib2","SARS-CoV-2","ATATATTATTCTGACC",5,107.69,9.63,-1.21,0.06,2.35,1.11,0,">1 nonsynonymous","R27V G116V V173S",3
"lib2","SARS-CoV-2","ATATATTCACTACGAC",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","ATATATTCAGATCCGA",11,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98K Y121V",2
"lib2","SARS-CoV-2","ATATATTCGCCGGTAA",3,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T T201R",2
"lib2","SARS-CoV-2","ATATATTCGTTATTAA",6,3.39,NA,NA,NA,NA,NA,NA,"stop","C6F F12N G101* L122V I138S",5
"lib2","SARS-CoV-2","ATATATTGAACCGGTA",1,25.93,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D98M P149H C158V",3
"lib2","SARS-CoV-2","ATATATTGAGGCCAAA",3,31.15,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N120M C158W",2
"lib2","SARS-CoV-2","ATATATTGCCTTATCA",2,13.63,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G83L A89T C150N F160G",4
"lib2","SARS-CoV-2","ATATATTGTTTCAATT",7,43.21,10.69,-0.14,0.03,2.91,1.09,0,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","ATATATTTTGTTTAAA",9,214.07,10.2,-0.63,0.02,2.95,1.05,0,"1 nonsynonymous","K87G",1
"lib2","SARS-CoV-2","ATATATTTTTAGCTCG",2,6.24,6.4,-4.44,0.61,1.8,1.05,0.02,">1 nonsynonymous","G86L T148N",2
"lib2","SARS-CoV-2","ATATATTTTTCTAATG",5,171.69,9.24,-1.6,0.03,2.95,1.06,0,">1 nonsynonymous","Y119C Y175W",2
"lib2","SARS-CoV-2","ATATCAAAAAATGTAA",7,57.14,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A33R Y50P F62E E141Q P197W",5
"lib2","SARS-CoV-2","ATATCAAAACCACGGA",3,11.69,NA,NA,NA,NA,NA,NA,"stop","A14Y K87*",2
"lib2","SARS-CoV-2","ATATCAAACACACAAA",1,22.89,9.21,-1.63,0.33,1.5,1,0.05,">1 nonsynonymous","P96Y T148I",2
"lib2","SARS-CoV-2","ATATCAAACCGTAACG",3,9.18,9.49,-1.35,0.2,1.95,1.09,0.02,">1 nonsynonymous","G9S Q84W Q144P",3
"lib2","SARS-CoV-2","ATATCAAACGAGACTA",2,27.44,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A33P S41P D90Y P149R Y165D",5
"lib2","SARS-CoV-2","ATATCAAACTGCAAGG",2,13.73,10.68,-0.16,0.12,2.84,1.12,0.01,">1 nonsynonymous","K87N L122V",2
"lib2","SARS-CoV-2","ATATCAAATGCCCTTT",5,0.44,NA,NA,NA,NA,NA,NA,"stop","R27* E154S",2
"lib2","SARS-CoV-2","ATATCAAATTTCATGT",3,57.84,8.43,-2.4,0.12,3,1.07,0.01,">1 nonsynonymous","L5D S43G I138T N157K",4
"lib2","SARS-CoV-2","ATATCAACAAACCTGA",1,21.46,7.63,-3.21,0.2,2.19,1.07,0.01,">1 nonsynonymous","C150F C158N",2
"lib2","SARS-CoV-2","ATATCAACAAACGACG",2,23.8,9.48,-1.36,0.16,2.05,1.12,0.01,">1 nonsynonymous","P54M W106K P149S G155S",4
"lib2","SARS-CoV-2","ATATCAACAGGCTTCA",1,9.92,6.77,-4.06,1.46,1.5,1.27,0.07,">1 nonsynonymous","Y66G C102D",2
"lib2","SARS-CoV-2","ATATCAACCAGAATCG",5,0,NA,NA,NA,NA,NA,NA,"stop","S69* N92W N130H",3
"lib2","SARS-CoV-2","ATATCAACCGAAAGGG",8,84.84,9.47,-1.36,0.06,2.06,1.02,0,">1 nonsynonymous","C6S F47C",2
"lib2","SARS-CoV-2","ATATCAACGCTTATTA",6,26.6,9.94,-0.89,0.08,2.47,1.05,0,">1 nonsynonymous","F44L K128I E154M S200V",4
"lib2","SARS-CoV-2","ATATCAAGCTATAAAA",4,51.03,8.52,-2.32,0.1,2.92,1.11,0,">1 nonsynonymous","Y35F K87H S113M",3
"lib2","SARS-CoV-2","ATATCAATCATAACCT",14,240.65,10.82,-0.01,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCAATCCGCCCGA",4,18.43,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I2N F8W A22E Q79A Q84P P96S",6
"lib2","SARS-CoV-2","ATATCAATGAGCCTTA",11,120.49,10.03,-0.8,0.05,2.92,1.07,0,"1 nonsynonymous","K114G",1
"lib2","SARS-CoV-2","ATATCAATTGCTAAAC",2,68.37,8.91,-1.93,0.07,2.71,1.12,0,">1 nonsynonymous","T46G L125V T201C",3
"lib2","SARS-CoV-2","ATATCAATTTCGTCTG",2,12.98,10.97,0.13,0.08,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCACAAAGGGATA",13,334.8,10.79,-0.05,0.04,2.97,1.04,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","ATATCACAAATTAACT",5,0.08,NA,NA,NA,NA,NA,NA,"stop","F47A T100L N107* E135Y I142T G166V",6
"lib2","SARS-CoV-2","ATATCACAACATGCTT",3,24.48,7.2,-3.64,0.5,1.5,1.13,0.06,">1 nonsynonymous","V11H R25V S41R G86H",4
"lib2","SARS-CoV-2","ATATCACAACTCGAGA",11,54.51,6.69,-4.14,0.19,1.5,1.09,0,">1 nonsynonymous","N4V R73V T148I P197G",4
"lib2","SARS-CoV-2","ATATCACAAGAATCTA",3,118.33,9.76,-1.08,0.06,2.29,1.14,0,">1 nonsynonymous","L95M G116P P149M T201Y",4
"lib2","SARS-CoV-2","ATATCACCACACGGTA",1,0.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101D",1
"lib2","SARS-CoV-2","ATATCACCACTCCGAC",12,101.27,10.84,0,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCACCCGGCCGTT",6,62.16,10.3,-0.54,0.06,2.81,1.15,0,">1 nonsynonymous","P7R R16C N130I",3
"lib2","SARS-CoV-2","ATATCACCCTTGAGAT",3,18.71,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","Q79P K94Y Y165T",3
"lib2","SARS-CoV-2","ATATCACCTATATCAT",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78M K114S I138S",3
"lib2","SARS-CoV-2","ATATCACGAGTAATAA",2,40.56,10.7,-0.14,0.06,2.77,1.14,0,"1 nonsynonymous","G9K",1
"lib2","SARS-CoV-2","ATATCAGAATTTAAAT",20,94.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40D G74N R124C E141I",4
"lib2","SARS-CoV-2","ATATCAGCATAATATA",3,30.06,10.86,0.03,0.07,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCAGGACCTGCAT",2,11.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T85N P96L N120R",3
"lib2","SARS-CoV-2","ATATCAGGGACAGTGG",5,38.23,10.1,-0.73,0.11,2.49,1.08,0.01,">1 nonsynonymous","S41V W106Y",2
"lib2","SARS-CoV-2","ATATCAGTACAACGCT",2,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S Y50T K87G S113G F160E",5
"lib2","SARS-CoV-2","ATATCAGTCGTCCTTG",8,63.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R27M K94T G101Q",3
"lib2","SARS-CoV-2","ATATCATAAACCGATG",3,33.79,10.87,0.03,0.04,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCATATTCCTGAG",3,40.02,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F62C A81I T140S C150K",4
"lib2","SARS-CoV-2","ATATCATCAGATTAAT",9,56.04,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K48S Q144D N151T Y178P",4
"lib2","SARS-CoV-2","ATATCATGATTTGCAC",1,5.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I N58D",2
"lib2","SARS-CoV-2","ATATCATGGAACTTGC",17,176.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P149Q F167R",2
"lib2","SARS-CoV-2","ATATCATGGCCGGCGC",4,0.12,NA,NA,NA,NA,NA,NA,"stop","N13T A18E S29V I88V I104*",5
"lib2","SARS-CoV-2","ATATCATGTGATATGA",2,4.9,NA,NA,NA,NA,NA,NA,"stop","N24L L38I A42* A145S G174A",5
"lib2","SARS-CoV-2","ATATCATTCTTGCCTG",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I G86W V103A R136L",4
"lib2","SARS-CoV-2","ATATCATTGCTCGATT",3,5.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82H D137A C150S",3
"lib2","SARS-CoV-2","ATATCATTGGCTGCCC",3,59.36,10.88,0.04,0.05,2.94,1.05,0,">1 nonsynonymous","A192E T201L",2
"lib2","SARS-CoV-2","ATATCATTTTGCAGAT",3,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I V20P A33D I88R R127S S139Y Y165M",7
"lib2","SARS-CoV-2","ATATCCAAACTACTAG",1,0.93,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","ATATCCAAGGTATCTA",14,306.35,6.01,-4.83,1.02,1.5,1.18,0.02,">1 nonsynonymous","T85M D98I A145N",3
"lib2","SARS-CoV-2","ATATCCAAGTCTAAGG",2,20.33,10.86,0.02,0.08,2.77,1.19,0,">1 nonsynonymous","L5A P149L",2
"lib2","SARS-CoV-2","ATATCCAATCCCGATT",1,0.28,NA,NA,NA,NA,NA,NA,"stop","K87* F134C",2
"lib2","SARS-CoV-2","ATATCCACAGTGAAAC",4,66.48,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G9V D112R Y121D",3
"lib2","SARS-CoV-2","ATATCCACATTGACTT",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M I88G T100K",3
"lib2","SARS-CoV-2","ATATCCACCTATTTTA",1,18.89,10.66,-0.17,0.07,2.9,1.07,0,">1 nonsynonymous","L122I S129G H189L",3
"lib2","SARS-CoV-2","ATATCCACGTTTACTA",2,54.75,10.7,-0.13,0.04,2.93,1.06,0,"1 nonsynonymous","I72C",1
"lib2","SARS-CoV-2","ATATCCAGAAACTGGT",5,35.68,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N40P D75Y D98S R127S",4
"lib2","SARS-CoV-2","ATATCCAGGCTCAAGT",20,651.92,10.84,0,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCCATACAGTCTA",6,93.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37G N92W T100Y G155T Q176K",5
"lib2","SARS-CoV-2","ATATCCATCTGGTAAA",9,1.23,NA,NA,NA,NA,NA,NA,"stop","V52A P54A C61R N109E P133D T148N G172* G196W",8
"lib2","SARS-CoV-2","ATATCCATTAATATTT",3,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y G74S V103W G117S K128W",5
"lib2","SARS-CoV-2","ATATCCATTAGCAGGA",7,51.4,10.87,0.03,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCCCAAAGCAACA",2,43.71,10.85,0.01,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCCCCAGCTAGTT",9,120.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N118S I142R G172R",3
"lib2","SARS-CoV-2","ATATCCCCTCAAAGCT",8,182.46,10.8,-0.04,0.04,2.95,1.05,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","ATATCCCCTGGCAGAC",2,40.99,8.57,-2.27,0.18,2,1.08,0.01,"1 nonsynonymous","Y165C",1
"lib2","SARS-CoV-2","ATATCCCGACTAAAGG",13,137.31,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P54L G172V",2
"lib2","SARS-CoV-2","ATATCCCTCAATACAG",7,114.81,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N40Y G86C Y119R G174A",4
"lib2","SARS-CoV-2","ATATCCCTCGGCCCGC",4,92.46,9.44,-1.39,0.04,2.94,1.06,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","ATATCCCTTCAAGTTT",2,55.54,10.77,-0.07,0.09,2.88,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCCGACACGGGCA",8,36.64,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","P7L F44M D90Y N92E S129N P197C",6
"lib2","SARS-CoV-2","ATATCCGCGCAAGTAT",4,27.34,6.56,-4.28,0.46,2.05,1.22,0.02,">1 nonsynonymous","V77D G116I",2
"lib2","SARS-CoV-2","ATATCCGGCTAAAAAT",9,14.85,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T3H C61L C158M Y165L",4
"lib2","SARS-CoV-2","ATATCCGGGGCAGTTT",1,44.96,9.55,-1.29,0.11,2.76,1.14,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","ATATCCGTAAAAGCAA",4,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49M F185K",2
"lib2","SARS-CoV-2","ATATCCGTTCTGCCTA",1,79.2,10.74,-0.1,0.04,2.98,1.03,0,"1 nonsynonymous","A18Q",1
"lib2","SARS-CoV-2","ATATCCTAAGACATAA",1,21.55,6.07,-4.76,0.66,3,1.11,0.01,">1 nonsynonymous","N1K S41R F62S Y121R E135L E154V",6
"lib2","SARS-CoV-2","ATATCCTAATTGATCT",14,110.71,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C49L T55L C150S L162Y Y175E",5
"lib2","SARS-CoV-2","ATATCCTACAATATGA",2,10.9,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S53F A105K Y119R G166Y E186T",5
"lib2","SARS-CoV-2","ATATCCTACCGCAAAA",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M Q84S D90P G101N",4
"lib2","SARS-CoV-2","ATATCCTAGGACCGCG",2,0.43,NA,NA,NA,NA,NA,NA,"stop","R27S A81* G155N F167S K199E",5
"lib2","SARS-CoV-2","ATATCCTATTAATGCA",2,39.96,10.81,-0.03,0.08,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCCTCAAAACACT",6,50.5,6,-4.84,1.31,1.5,1.13,0.01,">1 nonsynonymous","S69F V173T",2
"lib2","SARS-CoV-2","ATATCCTCGAGGTCAC",2,24.71,9.18,-1.65,0.23,1.64,1.11,0.03,">1 nonsynonymous","G9C Y39L T63G F99Y",4
"lib2","SARS-CoV-2","ATATCCTCTGGGCAAT",3,10.02,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","C6L R25V",2
"lib2","SARS-CoV-2","ATATCCTGCTTGTATG",7,106.73,10.84,0,0.04,2.9,1.1,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","ATATCCTGGTCTCAGT",3,68.11,10.25,-0.58,0.05,2.85,1,0,">1 nonsynonymous","N64P G83E",2
"lib2","SARS-CoV-2","ATATCCTTAATAAAGT",20,260.01,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26E S41A C61A G83L Y175V",5
"lib2","SARS-CoV-2","ATATCCTTATAGATCT",10,283.13,9.34,-1.5,0.04,2.07,1.09,0,">1 nonsynonymous","G83D D90Y Y175F",3
"lib2","SARS-CoV-2","ATATCCTTGCTGAACG",9,6.48,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S29I A33D T85Q V103S",4
"lib2","SARS-CoV-2","ATATCGAAGTTAGTCT",6,33.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15L N92V Y178S",3
"lib2","SARS-CoV-2","ATATCGAATTAAGCAG",2,42.62,6.1,-4.74,1.47,1.5,1.33,0.06,">1 nonsynonymous","C61L R124Q",2
"lib2","SARS-CoV-2","ATATCGAGGCACCAAG",16,284.69,10.82,-0.01,0.04,2.95,1.07,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","ATATCGATAAACGAAG",1,10.9,10.82,-0.02,0.1,2.84,1.18,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","ATATCGATTATATTAT",3,31.98,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","V52P D112V T140Q",3
"lib2","SARS-CoV-2","ATATCGCAACGCGATA",10,82.64,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C6F A14V R16K A33Q G172L",5
"lib2","SARS-CoV-2","ATATCGCAATCCAAAT",7,82.3,10.69,-0.15,0.08,2.82,1.1,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","ATATCGCCTTAGTCAT",7,141.07,10.89,0.06,0.05,2.92,1.1,0,"1 nonsynonymous","Y39Q",1
"lib2","SARS-CoV-2","ATATCGCGAAAGCGAG",3,80.22,8.62,-2.21,0.07,2.75,1.07,0,">1 nonsynonymous","Y50W G146V",2
"lib2","SARS-CoV-2","ATATCGCTAAACAGAT",3,4.63,NA,NA,NA,NA,NA,NA,"stop","S19* A89Q",2
"lib2","SARS-CoV-2","ATATCGCTTGAGTCGG",3,30.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95F P133K",2
"lib2","SARS-CoV-2","ATATCGGCGTTAAAAC",1,37.61,9.57,-1.27,0.1,2.69,1.15,0,">1 nonsynonymous","Y91F N107E",2
"lib2","SARS-CoV-2","ATATCGGGATTATATC",5,146.47,10.88,0.04,0.06,2.91,1.11,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","ATATCGGGCCATGATT",6,0.49,NA,NA,NA,NA,NA,NA,"stop","T46S T100* T201H",3
"lib2","SARS-CoV-2","ATATCGGGGAAAAAAC",6,82.76,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D98M P149S F167P",3
"lib2","SARS-CoV-2","ATATCGGGGTAAGTAG",6,52.73,10.81,-0.03,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCGGTGGTTACAT",11,194.46,10.58,-0.25,0.03,2.95,1.05,0,">1 nonsynonymous","G9W L60I",2
"lib2","SARS-CoV-2","ATATCGGTGTCACCAC",3,43.68,9.54,-1.29,0.09,2.95,1.07,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ATATCGGTTGAAAGCT",3,86.76,10.88,0.04,0.06,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATCGTACTCTTGTT",8,140.76,10.86,0.03,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCGTTGCTATACC",2,59.14,6.36,-4.47,0.26,2.21,1.14,0,">1 nonsynonymous","S29G V37W N109E R127A",4
"lib2","SARS-CoV-2","ATATCGTTTACCAAGG",8,223.26,9.83,-1,0.05,2.36,1.04,0,">1 nonsynonymous","D90V H189S G196M",3
"lib2","SARS-CoV-2","ATATCTAAAAATGCAA",8,81.85,10.84,0.01,0.08,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCTAAATAATACA",1,13.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45K V173T",2
"lib2","SARS-CoV-2","ATATCTAAATTGGTCA",8,148.89,10.36,-0.47,0.03,2.9,1.11,0,">1 nonsynonymous","K87L S113A S200W",3
"lib2","SARS-CoV-2","ATATCTAACCAGTTTT",1,21.86,9.29,-1.55,0.14,1.74,1.06,0.01,">1 nonsynonymous","A14S R27S L95M N151I",4
"lib2","SARS-CoV-2","ATATCTACAAGTCTAG",3,24.54,10.35,-0.49,0.08,2.79,1.13,0,">1 nonsynonymous","E10K S53A D90R",3
"lib2","SARS-CoV-2","ATATCTACCATCCCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L S41Y L95R E154S P161A",5
"lib2","SARS-CoV-2","ATATCTACCCTGATGA",3,37.04,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","ATATCTAGATAGTATT",12,183.67,10.89,0.06,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATCTAGATTAGATT",17,282.77,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A22E P177V",2
"lib2","SARS-CoV-2","ATATCTAGCAACTAGA",1,19.77,10.44,-0.4,0.12,2.79,1.04,0.01,">1 nonsynonymous","G9F D75Q A190P",3
"lib2","SARS-CoV-2","ATATCTAGGAATGTCA",1,10.72,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G9Q N64D S108I Q176V",4
"lib2","SARS-CoV-2","ATATCTAGTAAACAAG",8,54.41,6.05,-4.78,1.14,1.5,1.2,0.03,">1 nonsynonymous","R127W Q168W S200F",3
"lib2","SARS-CoV-2","ATATCTAGTTCTAATA",2,19.03,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","F12S F44L G86N A105Q R136T",5
"lib2","SARS-CoV-2","ATATCTATCAGACAGA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","A18R W106K R127* N171R",4
"lib2","SARS-CoV-2","ATATCTCAACAGGTCA",2,27.19,10.38,-0.45,0.08,2.77,1.08,0,">1 nonsynonymous","N1Q N64C K132W",3
"lib2","SARS-CoV-2","ATATCTCAATTCTGGT",4,0.92,NA,NA,NA,NA,NA,NA,"stop","C6D Y35F T55L F62W V71* A105L E141V",7
"lib2","SARS-CoV-2","ATATCTCCAATATAAT",2,20.82,9.03,-1.8,0.13,2.64,1.15,0.01,">1 nonsynonymous","N1C Y119F Q163W",3
"lib2","SARS-CoV-2","ATATCTCCGGCGACTA",6,97.25,10.12,-0.71,0.05,2.91,1.07,0,">1 nonsynonymous","K26T A81C F156V",3
"lib2","SARS-CoV-2","ATATCTCGAAGGAGTC",5,46.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D112Q F167S",2
"lib2","SARS-CoV-2","ATATCTCGCCCCGCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A18P G166*",2
"lib2","SARS-CoV-2","ATATCTGACAACCAAC",20,295.52,10.85,0.01,0.05,2.92,1.09,0,"1 nonsynonymous","I28Y",1
"lib2","SARS-CoV-2","ATATCTGCACCTTGTT",3,33.38,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N92P C158S",2
"lib2","SARS-CoV-2","ATATCTGGAATAGTTG",2,20.32,10.73,-0.11,0.08,3,1.08,0,"1 nonsynonymous","E154N",1
"lib2","SARS-CoV-2","ATATCTGGTGATACAA",3,10.75,7.27,-3.57,0.32,1.5,1.02,0.03,">1 nonsynonymous","G51R E76K Y91H T100R S129H",5
"lib2","SARS-CoV-2","ATATCTGGTTACAAGT",10,119.82,8.06,-2.78,0.19,1.6,1.1,0.01,">1 nonsynonymous","I2P Y39M K56P D98A Y119A",5
"lib2","SARS-CoV-2","ATATCTGTAAATAGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","N30* G86R",2
"lib2","SARS-CoV-2","ATATCTGTCATATGGC",12,32.4,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T3M Y35C V65D Y121L",4
"lib2","SARS-CoV-2","ATATCTGTTCACCAAA",5,35.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D98Y N107T G196W",3
"lib2","SARS-CoV-2","ATATCTTACTAATATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V F99S V173Y",3
"lib2","SARS-CoV-2","ATATCTTCCAGACATG",6,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I D34M A42I L60V Q176S",5
"lib2","SARS-CoV-2","ATATCTTGAAACCTTG",5,60.64,8.25,-2.58,0.13,1.84,1.1,0.01,">1 nonsynonymous","N1Q C6V T15G Y119S",4
"lib2","SARS-CoV-2","ATATCTTGAGCTAGAA",3,63.26,10.72,-0.11,0.03,2.97,1.04,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","ATATCTTGATAAAAAA",2,47.87,8.86,-1.97,0.09,2.71,1.07,0,">1 nonsynonymous","R136L G166T",2
"lib2","SARS-CoV-2","ATATCTTGGCGTGACG",1,29.03,10.13,-0.7,0.09,2.9,1.09,0.01,">1 nonsynonymous","Y35R K87V",2
"lib2","SARS-CoV-2","ATATCTTTAAAATACG",14,243.1,9.5,-1.33,0.03,2.92,1.09,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ATATGAAAATCTCACG",5,24.61,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","T85G F99T",2
"lib2","SARS-CoV-2","ATATGAAAATTACAAT",6,64.75,10.8,-0.04,0.08,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGAAAGACGATAC",2,29.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G Y35P N92L F99L P149A",5
"lib2","SARS-CoV-2","ATATGAAATTGCCAAA",6,9.81,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88K V180H T201Y",3
"lib2","SARS-CoV-2","ATATGAACCATAAGCC",10,2.24,NA,NA,NA,NA,NA,NA,"stop","A33* D97K P169K",3
"lib2","SARS-CoV-2","ATATGAACCCCCGTCT",29,175.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40S G86M L95T Y159Q",4
"lib2","SARS-CoV-2","ATATGAACGAACTTGA",8,195.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N1P F62N N157Y Q168K G174Q",5
"lib2","SARS-CoV-2","ATATGAACGTACAAGG",8,151.75,10.83,0,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATGAACTTTATACA",4,39.85,10.57,-0.27,0.06,2.96,1.03,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","ATATGAACTTTGTACT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10T T55Q Y143* Q163H Y178S",5
"lib2","SARS-CoV-2","ATATGAAGATTCGACT",3,82.36,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","W23P D34E S113G E154G",4
"lib2","SARS-CoV-2","ATATGAAGTATATTAA",10,101.84,7.58,-3.26,0.12,1.5,1.07,0,">1 nonsynonymous","G9Y S45T L95V N120L G146T G196L",6
"lib2","SARS-CoV-2","ATATGAATAAGTAACA",4,20,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A145G G152L F167S E186A T201R",5
"lib2","SARS-CoV-2","ATATGAATATTAATAA",5,31.64,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49S G155S G174W",3
"lib2","SARS-CoV-2","ATATGAATCGCAATGT",3,86.14,9.06,-1.77,0.08,1.68,1.11,0,">1 nonsynonymous","Y35T S69L",2
"lib2","SARS-CoV-2","ATATGAATCGGCATTG",9,91.19,10.65,-0.19,0.06,2.97,1.04,0,">1 nonsynonymous","P149S S164M",2
"lib2","SARS-CoV-2","ATATGAATGAGGACTT",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1E N13I K128R C150I",4
"lib2","SARS-CoV-2","ATATGAATGCACAAAG",7,29.8,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D90S A105F S139V",3
"lib2","SARS-CoV-2","ATATGAATTCGCAACC",10,107.46,8.54,-2.3,0.15,1.92,1.05,0.01,">1 nonsynonymous","N40P F44G N120W I142A",4
"lib2","SARS-CoV-2","ATATGACAAAACTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G51Q Y165*",2
"lib2","SARS-CoV-2","ATATGACACCTATATG",3,12.52,6.9,-3.93,0.47,1.5,1,0.05,">1 nonsynonymous","C49E G83V I88V I142Y",4
"lib2","SARS-CoV-2","ATATGACACGAGGATT",3,70.98,10.87,0.04,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGACACTTCCCCT",1,30.32,10.03,-0.8,0.13,2.54,1,0.01,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","ATATGACCCATTTTGA",2,45.4,8.5,-2.33,0.11,2.9,1.08,0,">1 nonsynonymous","D90K L111K N157E",3
"lib2","SARS-CoV-2","ATATGACCTGCAATCC",3,88.32,10.4,-0.43,0.05,2.85,1.09,0,"1 nonsynonymous","G83T",1
"lib2","SARS-CoV-2","ATATGACCTTCATTCT",4,125.55,10.71,-0.12,0.03,2.96,1.03,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","ATATGACGCCTAACGG",4,28.05,6,-4.84,1.72,3,1.19,0.01,">1 nonsynonymous","A14F Y93V",2
"lib2","SARS-CoV-2","ATATGACGTGAGATAT",8,43.62,8.37,-2.47,0.35,1.5,1,0.04,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ATATGAGAAAAATCGT",5,53.49,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T55S N92V",2
"lib2","SARS-CoV-2","ATATGAGAAACGACTG",4,29.01,9.87,-0.97,0.15,2.6,1,0.01,">1 nonsynonymous","G9M Y39G T148P",3
"lib2","SARS-CoV-2","ATATGAGAAGAAAATT",7,102.55,10.84,0.01,0.04,2.92,1.1,0,">1 nonsynonymous","Y39T T201M",2
"lib2","SARS-CoV-2","ATATGAGCGCCACTCT",2,23.84,8.15,-2.69,0.13,1.78,1.05,0.01,">1 nonsynonymous","F99T L125S",2
"lib2","SARS-CoV-2","ATATGAGCGCCATTCC",1,29.86,8.45,-2.38,0.14,2.03,1.07,0.01,">1 nonsynonymous","A42L G155F G166T",3
"lib2","SARS-CoV-2","ATATGAGGAAAAGGCA",3,91.3,10.89,0.06,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGAGTAGTTACAA",1,24.45,9.99,-0.85,0.09,3,1,0,"1 nonsynonymous","P177A",1
"lib2","SARS-CoV-2","ATATGAGTATGCAGCC",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81G A89S D97H A105T",4
"lib2","SARS-CoV-2","ATATGAGTCGCAACAG",4,42.25,10.9,0.06,0.06,3,1.04,0,">1 nonsynonymous","K48N L122A",2
"lib2","SARS-CoV-2","ATATGAGTTAAATTAT",3,29.63,10.88,0.05,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGAGTTAATACGT",2,18.42,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6L W23L G83S G155L F185A",5
"lib2","SARS-CoV-2","ATATGATACCATATAA",10,11.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3C A81V W106D",3
"lib2","SARS-CoV-2","ATATGATAGCGAACTT",19,76.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R D34Y N110W G117E",4
"lib2","SARS-CoV-2","ATATGATATAAGTTTA",4,151.81,10.68,-0.15,0.04,2.95,1.07,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","ATATGATCCCAATATG",6,49.26,10.66,-0.17,0.04,2.96,1.06,0,">1 nonsynonymous","V37L T170S",2
"lib2","SARS-CoV-2","ATATGATCTAAGTATC",3,35.48,6,-4.84,1.12,1.5,1.13,0.01,">1 nonsynonymous","N30H S41G F134M F167L",4
"lib2","SARS-CoV-2","ATATGATGCATCCCAT",10,296.87,10.34,-0.5,0.02,2.94,1.02,0,">1 nonsynonymous","N1G A89V L122H",3
"lib2","SARS-CoV-2","ATATGATGGGTATATT",7,110.59,8.74,-2.1,0.15,1.5,1.07,0.01,">1 nonsynonymous","S53L D137Y",2
"lib2","SARS-CoV-2","ATATGATTACCCAAAT",2,38.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86I T170H",2
"lib2","SARS-CoV-2","ATATGATTATACAAGA",3,5.19,6,-4.84,2,3,1.14,0.03,">1 nonsynonymous","F62V G101S S113L K132G",4
"lib2","SARS-CoV-2","ATATGATTGCGGAGAA",1,5.21,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S29M I72Y Y178H L183R",4
"lib2","SARS-CoV-2","ATATGATTTCACCCTT",3,32.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T46I Y121G F126S N151I Q163K",5
"lib2","SARS-CoV-2","ATATGCAAACCAACTC",5,46.18,10.98,0.14,0.07,2.93,1.05,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","ATATGCAAACTTTTCG",4,17.29,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N4T G74Y V77S N107Y S139D K198N",6
"lib2","SARS-CoV-2","ATATGCAACAACAATT",1,23.59,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A89K D112R Y175S A192T",4
"lib2","SARS-CoV-2","ATATGCAAGCCTCTTA",3,55.74,10.68,-0.16,0.04,2.93,1.04,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","ATATGCAATACTGCAC",1,19.69,10.26,-0.57,0.08,2.92,1.09,0,">1 nonsynonymous","G9K D59W T100K",3
"lib2","SARS-CoV-2","ATATGCAATATTGGCA",9,43.31,8.67,-2.17,0.16,1.66,1.04,0.01,">1 nonsynonymous","D34Y R136T",2
"lib2","SARS-CoV-2","ATATGCACAAACTAAG",17,129.87,10.68,-0.15,0.04,2.95,1.05,0,">1 nonsynonymous","F47V T100C",2
"lib2","SARS-CoV-2","ATATGCACAGGCTTCC",1,13.88,7.03,-3.81,0.21,2.03,1.04,0.01,">1 nonsynonymous","S45T G74R G166D",3
"lib2","SARS-CoV-2","ATATGCAGAAAATCAC",1,9.36,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L60M D98V F156M Y165L F185C",5
"lib2","SARS-CoV-2","ATATGCAGACTGCAAA",7,0.62,NA,NA,NA,NA,NA,NA,"stop","R27* P96F Y165L V173K",4
"lib2","SARS-CoV-2","ATATGCAGATTAAGAT",7,89.92,10.4,-0.44,0.06,2.92,1.1,0,">1 nonsynonymous","G9R T100L P169T",3
"lib2","SARS-CoV-2","ATATGCAGCAATGATG",7,1.86,NA,NA,NA,NA,NA,NA,"stop","C6* F70V T100R N171K",4
"lib2","SARS-CoV-2","ATATGCAGCGAAACTC",2,28.24,10.46,-0.38,0.1,2.81,1.15,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","ATATGCAGTTCATAAC",1,38.77,9.84,-1,0.09,2.21,1,0,">1 nonsynonymous","A14S S45Q P96A",3
"lib2","SARS-CoV-2","ATATGCATATCGAAGT",8,74.01,6.04,-4.8,1.37,1.5,1.24,0.04,">1 nonsynonymous","S41G F62M N110K Y123G L131S T201S",6
"lib2","SARS-CoV-2","ATATGCATCCATGCTT",3,16.31,10.37,-0.46,0.17,2.64,1.08,0.01,">1 nonsynonymous","I28M W106S",2
"lib2","SARS-CoV-2","ATATGCCAAGTGTGAT",4,45.67,10.38,-0.46,0.08,2.82,1.06,0,"1 nonsynonymous","V65S",1
"lib2","SARS-CoV-2","ATATGCCACAAACGAT",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T I104T V182L",3
"lib2","SARS-CoV-2","ATATGCCACGCACCAA",5,133.8,8.79,-2.04,0.07,2.72,1.07,0,">1 nonsynonymous","N1K C6F A33L K87N G174P",5
"lib2","SARS-CoV-2","ATATGCCATGGACAAC",4,9.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F12I R179L",2
"lib2","SARS-CoV-2","ATATGCCGAAAGATTC",4,143.51,10.95,0.12,0.05,2.93,1.09,0,">1 nonsynonymous","T63S I104W L122Q T201P",4
"lib2","SARS-CoV-2","ATATGCCGCGGGATTT",6,28.93,6.53,-4.3,0.47,1.5,1.07,0.03,">1 nonsynonymous","C49P D68W",2
"lib2","SARS-CoV-2","ATATGCCTAAGAACCT",1,31.61,10.78,-0.06,0.09,2.83,1.2,0,">1 nonsynonymous","A42K T85G",2
"lib2","SARS-CoV-2","ATATGCCTTGAATTTC",1,57.16,10.81,-0.03,0.03,2.9,1.09,0,"1 nonsynonymous","A192T",1
"lib2","SARS-CoV-2","ATATGCCTTTCCAAAT",2,18.56,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","T3K V11L F70V S139M",4
"lib2","SARS-CoV-2","ATATGCGAACTAGAAC",11,0.41,NA,NA,NA,NA,NA,NA,"stop","I2S D34S D90* P177Y",4
"lib2","SARS-CoV-2","ATATGCGACAATAGAG",2,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F R25V",2
"lib2","SARS-CoV-2","ATATGCGAGGTTCCTT",5,76.5,10.28,-0.55,0.04,2.86,1.1,0,">1 nonsynonymous","S45Y F47L K198D",3
"lib2","SARS-CoV-2","ATATGCGAGTGTACTA",4,6.82,NA,NA,NA,NA,NA,NA,"stop","V32L T55D L122A R136T Q168*",5
"lib2","SARS-CoV-2","ATATGCGTAACAAATG",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W C61V G83N P161V G174L",5
"lib2","SARS-CoV-2","ATATGCTAGATAGCTG",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Q A105E G152V",3
"lib2","SARS-CoV-2","ATATGCTCACGAGGCT",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M F99C N107L",3
"lib2","SARS-CoV-2","ATATGCTGAACCATGT",4,55.93,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","C6E S45M S113F",3
"lib2","SARS-CoV-2","ATATGCTGCTACAGCA",4,5.87,6.7,-4.14,0.54,1.5,1.21,0.04,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ATATGCTTAACCAGCG",6,19.44,6,-4.84,1.47,3,1.18,0.01,">1 nonsynonymous","N4P F44R P96L Y121F T201R",5
"lib2","SARS-CoV-2","ATATGCTTAGATCCCT",4,69.38,10.8,-0.03,0.06,2.91,1.09,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","ATATGCTTTAACTGGT",3,15.05,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","D90C Y143D T201L",3
"lib2","SARS-CoV-2","ATATGGAAACCAACAA",2,33.69,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V20H",1
"lib2","SARS-CoV-2","ATATGGAAATGGGTTG",5,227.8,10.47,-0.37,0.04,2.99,1.03,0,"1 nonsynonymous","F156H",1
"lib2","SARS-CoV-2","ATATGGACGAGTTATC",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L N58D Y91Q",3
"lib2","SARS-CoV-2","ATATGGAGGTGGCGGT",2,28.48,6,-4.84,0.65,3,1.21,0.01,">1 nonsynonymous","V20S R127H T148V",3
"lib2","SARS-CoV-2","ATATGGATTTATGTGA",9,56.64,10.75,-0.08,0.06,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGGCACAGTCACA",10,31.98,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","T55N R136M C158R F167I S200N",5
"lib2","SARS-CoV-2","ATATGGCATATTTAAT",2,27.15,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","W106T C158F",2
"lib2","SARS-CoV-2","ATATGGCGTAGAATAC",21,406.22,7.61,-3.22,0.12,2.28,1.16,0,">1 nonsynonymous","T55D Y119A K128T F156D",4
"lib2","SARS-CoV-2","ATATGGCTGTGATACA",3,96.67,8.35,-2.48,0.1,1.77,1.13,0,">1 nonsynonymous","F62L P161V",2
"lib2","SARS-CoV-2","ATATGGGAATACGAAA",2,19.04,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y91S G117P G166I Y178I",4
"lib2","SARS-CoV-2","ATATGGGAGGACATAG",5,20.71,6,-4.84,2,3,1.3,0.02,">1 nonsynonymous","D34Q V52F W106E S113L A145R",5
"lib2","SARS-CoV-2","ATATGGGCACTGCATT",14,147.89,10.41,-0.43,0.04,2.92,1.03,0,">1 nonsynonymous","T15N T46S",2
"lib2","SARS-CoV-2","ATATGGGCTCACACAC",1,23.74,10.27,-0.57,0.13,2.59,1.09,0.01,">1 nonsynonymous","N24T K94Q S129K",3
"lib2","SARS-CoV-2","ATATGGGGCGTAAATA",13,145.92,10.84,0,0.06,2.84,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATGGGTCACTGTGT",5,127.37,10.71,-0.13,0.04,2.92,1.08,0,">1 nonsynonymous","G9A Q144S",2
"lib2","SARS-CoV-2","ATATGGGTGGGGGTGA",9,28.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y39S Q79R D97M Y143R",4
"lib2","SARS-CoV-2","ATATGGTAGACTATCA",1,13.88,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","S36K I72P",2
"lib2","SARS-CoV-2","ATATGGTCTAGTTATA",3,52.05,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D68T T85D Y91T G174H",4
"lib2","SARS-CoV-2","ATATGGTCTTTTGCAG",5,46.61,10.51,-0.32,0.13,2.8,1,0.02,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","ATATGGTGCCCAACAA",12,66.48,9.7,-1.14,0.08,1.95,1.04,0,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","ATATGGTGCCTACATG",4,57.69,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36L N107Y I142Q",3
"lib2","SARS-CoV-2","ATATGGTGTATTATAG",5,27.93,8.14,-2.7,0.24,1.5,1.07,0.02,">1 nonsynonymous","D112M T170S",2
"lib2","SARS-CoV-2","ATATGGTTGCTAAGGT",9,4.34,NA,NA,NA,NA,NA,NA,"stop","Q84R P149Q K199*",3
"lib2","SARS-CoV-2","ATATGGTTTAATATGC",9,134.46,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35L R127V R136S",3
"lib2","SARS-CoV-2","ATATGTAAAAATAATT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77D D90Y",2
"lib2","SARS-CoV-2","ATATGTAAATCACAGA",4,88.9,10.31,-0.53,0.04,2.82,1.03,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","ATATGTAACTCAAGGA",16,3.26,NA,NA,NA,NA,NA,NA,"stop","L5R S29* G101R",3
"lib2","SARS-CoV-2","ATATGTAAGGATGTAG",5,106.75,10.78,-0.06,0.07,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGTAATATGAAGT",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I K56S G83W N110L G155V",5
"lib2","SARS-CoV-2","ATATGTACACTTTATT",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L E10P N13S F99V Y165L",5
"lib2","SARS-CoV-2","ATATGTACGGACACGA",10,30.33,10.12,-0.72,0.1,2.06,1.08,0.01,">1 nonsynonymous","W106R L122T P197H",3
"lib2","SARS-CoV-2","ATATGTACTCAACACA",7,39.95,8.89,-1.94,0.2,1.5,1.1,0.03,"1 nonsynonymous","A67R",1
"lib2","SARS-CoV-2","ATATGTAGCTACTGAA",1,14.73,10.23,-0.61,0.11,2.66,1,0,">1 nonsynonymous","L5Q P96K",2
"lib2","SARS-CoV-2","ATATGTAGTTTAATAG",2,14.92,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23M L60W G146Q",3
"lib2","SARS-CoV-2","ATATGTATAAAAAAAC",4,33.61,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","P7R S108Y S129Y Y178D",4
"lib2","SARS-CoV-2","ATATGTATAAAATATC",1,14.88,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","K114L S129I Y165F Y175G T201H",5
"lib2","SARS-CoV-2","ATATGTATTATACTTA",5,104.38,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F44N G86E Y91D A105L S113P N157C",6
"lib2","SARS-CoV-2","ATATGTCAACAGTTCT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M P82V",2
"lib2","SARS-CoV-2","ATATGTCCTGGGTAAG",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P G83V N107L Y119A S147P",5
"lib2","SARS-CoV-2","ATATGTCGATCATAAC",7,128.64,10.83,0,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATGTCTAGATGATA",4,24.31,9.05,-1.79,0.08,1.78,1.11,0,"1 nonsynonymous","W23R",1
"lib2","SARS-CoV-2","ATATGTCTAGCTTGGT",8,127.24,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","S36Q C150S V181L G196Q",4
"lib2","SARS-CoV-2","ATATGTGAATAGAGGC",3,38.5,9.54,-1.29,0.05,2.93,1.07,0,">1 nonsynonymous","K87A G174Y T201M",3
"lib2","SARS-CoV-2","ATATGTGAGCATCGAC",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S W106K",2
"lib2","SARS-CoV-2","ATATGTGCAAAAAGAT",5,68.46,10.94,0.1,0.07,2.98,1.03,0,">1 nonsynonymous","Y39L D97L",2
"lib2","SARS-CoV-2","ATATGTGGCAGAAACT",8,244.97,10.43,-0.4,0.03,2.95,1.03,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","ATATGTGGCGTTCAGG",4,28.7,10.96,0.13,0.09,2.9,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATGTGTCAGAAAAA",5,72.13,10.9,0.06,0.06,2.94,1.06,0,">1 nonsynonymous","K56D N151R",2
"lib2","SARS-CoV-2","ATATGTTAAAGATCGG",7,73.73,9.51,-1.33,0.1,2.06,1.15,0,">1 nonsynonymous","T15V N107A S139T",3
"lib2","SARS-CoV-2","ATATGTTAATGACTAT",4,73.97,10.74,-0.09,0.05,2.95,1.06,0,">1 nonsynonymous","A33C V194I C195F",3
"lib2","SARS-CoV-2","ATATGTTCATATTTTT",4,7.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9S K48Q S53Y N58G L183P",5
"lib2","SARS-CoV-2","ATATGTTGAAAGATGA",6,0.35,NA,NA,NA,NA,NA,NA,"stop","V71* L122T D137M",3
"lib2","SARS-CoV-2","ATATGTTGTCCGACCT",5,16.14,9.7,-1.13,0.17,2.25,1.03,0.02,">1 nonsynonymous","P96C P197G",2
"lib2","SARS-CoV-2","ATATGTTTACCAATAA",2,8.06,8.02,-2.82,0.33,1.5,1.15,0.02,">1 nonsynonymous","A33S P82L",2
"lib2","SARS-CoV-2","ATATGTTTTAATTTTC",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T P96I G146H Q176L",4
"lib2","SARS-CoV-2","ATATTAAAAGCATACC",8,59.8,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","G101E I142L",2
"lib2","SARS-CoV-2","ATATTAAAATCAAACT",7,41.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F L131H",2
"lib2","SARS-CoV-2","ATATTAAACACCTAAA",6,71.49,8.35,-2.49,0.1,1.68,1.08,0,">1 nonsynonymous","I138Y P161T",2
"lib2","SARS-CoV-2","ATATTAAACTATTGTT",8,37.87,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C31W K128S S139L L183S",4
"lib2","SARS-CoV-2","ATATTAAAGATTCGGT",49,303.06,9.57,-1.26,0.04,1.82,1.07,0,">1 nonsynonymous","C102A V173L",2
"lib2","SARS-CoV-2","ATATTAAAGGTATGAC",3,28.59,9.33,-1.5,0.14,1.94,1.03,0.01,">1 nonsynonymous","F8S N110Y T201S",3
"lib2","SARS-CoV-2","ATATTAAATAATCTAT",5,85.43,10.1,-0.74,0.07,2.71,1.04,0,">1 nonsynonymous","G116T S147F P149N G196Q",4
"lib2","SARS-CoV-2","ATATTAAATATAAATC",4,33.32,10.69,-0.15,0.06,2.92,1.09,0,"1 nonsynonymous","F47M",1
"lib2","SARS-CoV-2","ATATTAAATCGACCCA",7,56.01,10.84,0,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAAATGGCCGGG",4,82.11,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","ATATTAAATTGGATCT",9,43.77,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F8S D68Y G146M N151D",4
"lib2","SARS-CoV-2","ATATTAACACACTTTA",6,0.48,NA,NA,NA,NA,NA,NA,"stop","F8C F70* Y119K",3
"lib2","SARS-CoV-2","ATATTAACCGCATGAA",3,29.31,10.83,-0.01,0.07,2.92,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ATATTAACGTCCAATT",25,156.82,6,-4.84,1.94,1.5,1.27,0.01,">1 nonsynonymous","F99Q V173D",2
"lib2","SARS-CoV-2","ATATTAACTATGGGTT",2,106.27,10.72,-0.12,0.05,2.98,1.05,0,">1 nonsynonymous","T3K T55V",2
"lib2","SARS-CoV-2","ATATTAACTGCAATAG",5,74.17,10,-0.84,0.09,2.38,1.02,0,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","ATATTAAGAAATAACA",1,21.81,6,-4.84,2,3,1.06,0,">1 nonsynonymous","S36W P82M D97C D112T",4
"lib2","SARS-CoV-2","ATATTAAGAAGCTACT",9,358.01,10.79,-0.05,0.03,2.95,1.06,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","ATATTAAGACCGTGCA",1,13.48,10.14,-0.7,0.13,2.84,1,0.01,">1 nonsynonymous","S43R Q84S K128L E154L",4
"lib2","SARS-CoV-2","ATATTAAGATAATTCC",2,27.58,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L38Q K87T F99I D112C Y143V Y178H",6
"lib2","SARS-CoV-2","ATATTAAGCATACCAG",1,18.24,10.53,-0.31,0.09,2.88,1.16,0,">1 nonsynonymous","V37G V194I",2
"lib2","SARS-CoV-2","ATATTAAGGCGCACAG",3,65.18,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V11L S139L Q176E",3
"lib2","SARS-CoV-2","ATATTAATAAAGTAAA",1,7.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49D Y123T A145N T201A",4
"lib2","SARS-CoV-2","ATATTAATACACAATA",1,14.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A D97G",2
"lib2","SARS-CoV-2","ATATTAATATACCATT",5,114.16,10.89,0.05,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAATTATAAATT",2,4.2,NA,NA,NA,NA,NA,NA,"stop","R16N N107L T140V Q176*",4
"lib2","SARS-CoV-2","ATATTAATTGTGACGA",1,40.05,10.33,-0.51,0.06,2.98,1.02,0,"1 nonsynonymous","G155H",1
"lib2","SARS-CoV-2","ATATTACAGATAACTG",1,15.72,9.76,-1.08,0.11,2.52,1.04,0.01,">1 nonsynonymous","S41F D90V",2
"lib2","SARS-CoV-2","ATATTACATTAACTTT",8,29.27,9.22,-1.62,0.08,2.64,1.06,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","ATATTACATTACCACT",4,9.18,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","F44K D112K D137V",3
"lib2","SARS-CoV-2","ATATTACATTTTTAAT",1,15.33,6,-4.84,1.02,3,1.05,0,">1 nonsynonymous","R16K F70W S113T Y119T F126G S184G E186Q",7
"lib2","SARS-CoV-2","ATATTACCAACGATAA",5,64.53,9.84,-1,0.05,2.84,1.07,0,">1 nonsynonymous","V11A K87Y K198I",3
"lib2","SARS-CoV-2","ATATTACCCTCATAAA",7,403.64,6.57,-4.27,0.29,1.5,1.15,0.01,">1 nonsynonymous","P177V T201S",2
"lib2","SARS-CoV-2","ATATTACGCAATCGCA",4,31.07,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","K26L I88T N157K",3
"lib2","SARS-CoV-2","ATATTACGCCGGGACA",14,10.08,NA,NA,NA,NA,NA,NA,"stop","V71K R127V F156*",3
"lib2","SARS-CoV-2","ATATTACTACCAAACT",3,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H A33T N107D",3
"lib2","SARS-CoV-2","ATATTACTATCCGATA",2,55.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32N N64E R73V E141G",4
"lib2","SARS-CoV-2","ATATTACTCATCGATC",4,17.13,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","A14M G172C",2
"lib2","SARS-CoV-2","ATATTAGAAATATGAA",12,100.64,10.81,-0.03,0.05,2.94,1.05,0,"1 nonsynonymous","S129N",1
"lib2","SARS-CoV-2","ATATTAGACGGCAAAA",7,151.8,10.09,-0.75,0.05,2.95,1.04,0,">1 nonsynonymous","F62L E154V",2
"lib2","SARS-CoV-2","ATATTAGAGACTCCAC",1,68.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37P D59A A105M Y119R G152V F185E",6
"lib2","SARS-CoV-2","ATATTAGAGATTGTAC",9,69.67,10.8,-0.04,0.03,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAGAGGCACGGT",6,115.04,9.25,-1.58,0.04,2.89,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ATATTAGATCCTTAAA",2,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141C P149C",2
"lib2","SARS-CoV-2","ATATTAGCATTAAGAA",2,7.7,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAGCTATGCCTT",6,75.38,9.72,-1.11,0.04,2.92,1.11,0,">1 nonsynonymous","T100K Y119K",2
"lib2","SARS-CoV-2","ATATTAGCTCACCAGA",1,22.64,10.04,-0.8,0.34,1.5,1.01,0.06,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","ATATTAGCTTACTTAA",8,85.02,6.17,-4.66,0.75,1.5,1.22,0.02,">1 nonsynonymous","G74L C150I",2
"lib2","SARS-CoV-2","ATATTAGGAGGAAAGG",3,31.39,9.06,-1.78,0.06,2.86,1.08,0,">1 nonsynonymous","N30T G166V",2
"lib2","SARS-CoV-2","ATATTAGGTTTATTCT",11,98.16,10.77,-0.07,0.08,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAGTCCCTAGCG",1,12.29,10.81,-0.02,0.09,2.94,1.08,0,">1 nonsynonymous","K26Q T63S",2
"lib2","SARS-CoV-2","ATATTAGTTAATTACG",7,194.14,10.8,-0.03,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTAGTTCAAATAG",1,7.68,10.8,-0.04,0.12,2.71,1.29,0.01,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","ATATTATAATGGATAA",8,2.29,NA,NA,NA,NA,NA,NA,"stop","S45F G51F A89* G117P Q163T",5
"lib2","SARS-CoV-2","ATATTATACACCTACA",5,107.2,9.96,-0.87,0.09,2.04,1.03,0,">1 nonsynonymous","S36I I72V K94S",3
"lib2","SARS-CoV-2","ATATTATACCACTTGC",5,96.57,10.82,-0.01,0.04,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTATACGATTCGA",2,5.14,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V52G V103D",2
"lib2","SARS-CoV-2","ATATTATACTTTAGAG",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","ATATTATAGAAATGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61I P82S C102* K114D",4
"lib2","SARS-CoV-2","ATATTATATACATCAA",7,40.66,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G116Y G146P",2
"lib2","SARS-CoV-2","ATATTATATAGAGATT",5,41.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4I A14E Y91V V103M T201L",5
"lib2","SARS-CoV-2","ATATTATGAAACCGAA",3,1.29,NA,NA,NA,NA,NA,NA,"stop","D98P F156R K199*",3
"lib2","SARS-CoV-2","ATATTATGAGAGGTCT",2,16.39,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","A67N",1
"lib2","SARS-CoV-2","ATATTATGATTCAACT",10,116.11,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F8P V20M T55S K128S Y143K Y165E K199E",7
"lib2","SARS-CoV-2","ATATTATGCAAAAGAT",4,24.46,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N4S V32H S69T I88M L162S A190F",6
"lib2","SARS-CoV-2","ATATTATGCACAAGAA",9,138.89,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V37H V77R Y175V",3
"lib2","SARS-CoV-2","ATATTATGCCCCTTCT",4,289.81,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","E10G G155L Y175V",3
"lib2","SARS-CoV-2","ATATTATGCTAATAAG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","N4L P82* S139P S184K",4
"lib2","SARS-CoV-2","ATATTATTCTTAACCC",5,51.17,6.42,-4.41,0.44,1.5,1.19,0.01,">1 nonsynonymous","I2A D68V D97S",3
"lib2","SARS-CoV-2","ATATTATTGATTTATC",10,54.44,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8T I138L P161N",3
"lib2","SARS-CoV-2","ATATTCAAAACGAGGT",1,73.75,10.41,-0.42,0.07,2.88,1.04,0,">1 nonsynonymous","F8L L111P",2
"lib2","SARS-CoV-2","ATATTCAAATTCAATC",9,0.05,NA,NA,NA,NA,NA,NA,"stop","G9Q G86*",2
"lib2","SARS-CoV-2","ATATTCAACTAATTAG",3,43.63,10.46,-0.38,0.03,2.96,1.01,0,"1 nonsynonymous","L162M",1
"lib2","SARS-CoV-2","ATATTCAACTCATCTA",1,9.68,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","ATATTCAAGAGATTGG",6,50.29,11.05,0.21,0.07,2.98,1.02,0,">1 nonsynonymous","V37S V153R",2
"lib2","SARS-CoV-2","ATATTCAAGCGAAACG",2,41.79,8.15,-2.69,0.25,1.84,1.15,0.02,">1 nonsynonymous","G74D N110M",2
"lib2","SARS-CoV-2","ATATTCAAGTATATAT",3,0.79,NA,NA,NA,NA,NA,NA,"stop","F17* S164T S184L",3
"lib2","SARS-CoV-2","ATATTCACATCCCGAC",2,6.16,9.47,-1.37,0.15,2.13,1.06,0.01,">1 nonsynonymous","W106V N120R T140S",3
"lib2","SARS-CoV-2","ATATTCACCCGTGAGT",4,106.58,7.2,-3.63,0.2,1.95,1.16,0.01,">1 nonsynonymous","K56E T85K V115L C158S L188K",5
"lib2","SARS-CoV-2","ATATTCACTCCCTAAA",3,56.23,6.82,-4.02,0.28,1.5,1.15,0.01,">1 nonsynonymous","G9K Y21R",2
"lib2","SARS-CoV-2","ATATTCAGCATATTTA",11,77.44,8.47,-2.37,0.12,1.74,1.1,0.01,">1 nonsynonymous","P54V C61I G116H P161A",4
"lib2","SARS-CoV-2","ATATTCAGGAAGAAAT",2,27.06,9.88,-0.96,0.11,2.8,1.15,0,">1 nonsynonymous","Y119K V173R",2
"lib2","SARS-CoV-2","ATATTCAGGATACCCC",4,6.25,NA,NA,NA,NA,NA,NA,"stop","F47* D59V E141L",3
"lib2","SARS-CoV-2","ATATTCATAAAAATCT",8,49.45,7.55,-3.28,0.52,1.5,1,0.06,">1 nonsynonymous","L38T V103A",2
"lib2","SARS-CoV-2","ATATTCATATAGCAAC",5,25.85,8.03,-2.81,0.19,2.12,1.03,0.02,">1 nonsynonymous","L5K Y121D",2
"lib2","SARS-CoV-2","ATATTCATCAATTGCG",4,76.31,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F12T V77A S129I Y175R",4
"lib2","SARS-CoV-2","ATATTCCACTTTCAAC",5,91.54,10.47,-0.36,0.05,2.97,1,0,">1 nonsynonymous","C49W Q84M",2
"lib2","SARS-CoV-2","ATATTCCAGACCTTTG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","L5N Q168*",2
"lib2","SARS-CoV-2","ATATTCCCACTAATCA",1,3.84,NA,NA,NA,NA,NA,NA,"stop","A14M N64D D112*",3
"lib2","SARS-CoV-2","ATATTCCTATGTCAAA",1,26.71,10.96,0.12,0.06,2.81,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTCCTCTCGCGGA",5,121.03,9.95,-0.89,0.05,2.89,1.12,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","ATATTCCTTGAAACTT",3,32.95,11.03,0.19,0.07,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTCCTTTACCATT",4,14.47,NA,NA,NA,NA,NA,NA,"stop","K56* P82V",2
"lib2","SARS-CoV-2","ATATTCGAAATATCTC",6,26.35,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","V37L C49Q L57Y Y91I A105Q S129R S164K",7
"lib2","SARS-CoV-2","ATATTCGCGAGATCAA",16,79.09,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P54H I72Y S113E K198F",4
"lib2","SARS-CoV-2","ATATTCGGAATCATCT",5,1.85,NA,NA,NA,NA,NA,NA,"stop","K56* G155S",2
"lib2","SARS-CoV-2","ATATTCGGGAGAACAG",2,14.71,6.01,-4.82,0.71,2.58,1.13,0.01,">1 nonsynonymous","A67L Q84H L95K",3
"lib2","SARS-CoV-2","ATATTCTCAGTAGGGA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D V103L",2
"lib2","SARS-CoV-2","ATATTCTCTGGACAAG",6,95.71,9.59,-1.25,0.02,2.94,1.05,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","ATATTCTGCTTAAATA",2,34.04,10.78,-0.05,0.04,2.95,1.06,0,">1 nonsynonymous","L60E V77L",2
"lib2","SARS-CoV-2","ATATTCTTACTAAATC",2,1.26,NA,NA,NA,NA,NA,NA,"stop","V11P Y35T A89N T100* K198T",5
"lib2","SARS-CoV-2","ATATTCTTCAACATGG",10,73.76,6,-4.84,1.32,1.5,1.12,0.01,">1 nonsynonymous","I88C F156C",2
"lib2","SARS-CoV-2","ATATTCTTCAGCAAAG",7,94.75,9.16,-1.67,0.09,1.96,1.07,0,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","ATATTCTTGTAAATCG",5,39.82,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6S F70L D90S L122S S200I",5
"lib2","SARS-CoV-2","ATATTCTTTTCAGAGA",4,53.99,9.48,-1.35,0.1,1.84,1.04,0,">1 nonsynonymous","E10C S41R I80L D98N",4
"lib2","SARS-CoV-2","ATATTGAAATGCTTTA",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L T46D F99L Y159K",4
"lib2","SARS-CoV-2","ATATTGAAGTCCAAAA",3,51.18,10.71,-0.12,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTGAATCCTACCT",2,1.03,NA,NA,NA,NA,NA,NA,"stop","Y50* A105L K128M V173A",4
"lib2","SARS-CoV-2","ATATTGACAGAACTAA",2,13.33,8.55,-2.28,0.35,1.5,1.01,0.05,">1 nonsynonymous","S43L P82S Y123M",3
"lib2","SARS-CoV-2","ATATTGACCCGGAGTT",5,5.58,NA,NA,NA,NA,NA,NA,"stop","T15Y D112* R124N P133W T201I",5
"lib2","SARS-CoV-2","ATATTGAGAGATTGTG",5,1.6,NA,NA,NA,NA,NA,NA,"stop","S45I C61V Y119*",3
"lib2","SARS-CoV-2","ATATTGATCTCGCAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S43* C49P G174S",3
"lib2","SARS-CoV-2","ATATTGATGCACGTTC",2,13.53,9.44,-1.4,0.18,2.04,1.01,0.02,">1 nonsynonymous","C61R E141V V181L H189Q",4
"lib2","SARS-CoV-2","ATATTGCAACGCCGAT",4,47.8,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G86I A105Q G117A F134N Q144K",5
"lib2","SARS-CoV-2","ATATTGCACCAATTCA",2,38.06,10.08,-0.76,0.13,2.44,1.03,0.01,">1 nonsynonymous","N4H L131C",2
"lib2","SARS-CoV-2","ATATTGCAGCATAGCA",1,11.36,6,-4.84,2,1.5,1,0,">1 nonsynonymous","N13I E76W K94S",3
"lib2","SARS-CoV-2","ATATTGCCCATGAAAT",2,33.91,10.13,-0.7,0.08,2.2,1,0,">1 nonsynonymous","S19R K26V K48R P54R Q168W",5
"lib2","SARS-CoV-2","ATATTGCGCAGCTGAT",4,78.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A89G F167L",2
"lib2","SARS-CoV-2","ATATTGCGCATTAGAA",8,0.17,NA,NA,NA,NA,NA,NA,"stop","T55S I104M T170V S184* T201S",5
"lib2","SARS-CoV-2","ATATTGCGTATAAATC",6,54.21,6.44,-4.4,0.68,1.5,1.38,0.03,">1 nonsynonymous","C49H D97I Y143C H189Y",4
"lib2","SARS-CoV-2","ATATTGCTAAATAAAA",2,13.16,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A81V Y123S P161C T201E",4
"lib2","SARS-CoV-2","ATATTGCTACATTAAT",14,112.3,10.77,-0.07,0.07,2.89,1.01,0,"1 nonsynonymous","T148W",1
"lib2","SARS-CoV-2","ATATTGGAACGAGTGA",7,39.82,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K48S S69G T100S N171F Q176S",5
"lib2","SARS-CoV-2","ATATTGGATGATATAC",2,9.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6Y A22V K94I A105C Y119K F134S",6
"lib2","SARS-CoV-2","ATATTGGCAAGCATCA",4,0.03,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","ATATTGGCAGGTTATG",4,4.18,NA,NA,NA,NA,NA,NA,"stop","V11Y G116* P161D",3
"lib2","SARS-CoV-2","ATATTGGCTCTACGAT",4,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y Y91T G155L L162H V173S",5
"lib2","SARS-CoV-2","ATATTGGTGATTCTTA",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D W23A L60R V65R K128Y",5
"lib2","SARS-CoV-2","ATATTGTAAAGGTTGG",3,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P C49W D112H",3
"lib2","SARS-CoV-2","ATATTGTAATAACGGA",1,28.67,10.93,0.1,0.1,2.88,1.02,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","ATATTGTATACAAGAT",18,241.74,9.65,-1.19,0.04,2.91,1.06,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","ATATTGTATCATACAG",7,39.98,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S36L G51I S69K",3
"lib2","SARS-CoV-2","ATATTGTGAGTCCCTG",8,65.97,8.32,-2.52,0.12,1.54,1.09,0.01,">1 nonsynonymous","G9R Q84K D90N D97C G155R",5
"lib2","SARS-CoV-2","ATATTGTGCATAAATG",4,74.66,8.15,-2.69,0.12,2.01,1.05,0,">1 nonsynonymous","S53C Q163K F167L",3
"lib2","SARS-CoV-2","ATATTGTTAAACACCG",10,156.72,10.85,0.02,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTGTTACGTTTGT",4,44.78,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y39F G101I G155N",3
"lib2","SARS-CoV-2","ATATTGTTGTAGGACT",12,139.86,10.66,-0.17,0.05,2.86,1.05,0,">1 nonsynonymous","I2T F62N",2
"lib2","SARS-CoV-2","ATATTGTTTCCATAAA",1,21.18,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","W23S V37R D90H G116N S164I",5
"lib2","SARS-CoV-2","ATATTTAAAAGCAGAA",3,43.7,10.79,-0.04,0.06,2.87,1.13,0,">1 nonsynonymous","K56N T140R",2
"lib2","SARS-CoV-2","ATATTTAAACTACCAG",4,87.1,10.77,-0.07,0.04,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTTAAAGCCCGAT",9,95.27,8.37,-2.47,0.12,2.07,1.1,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","ATATTTAAATATAGTG",2,15.91,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","P82L K87W Y121C F134G",4
"lib2","SARS-CoV-2","ATATTTAAATCGTATT",1,46.89,9.92,-0.92,0.13,2.2,1,0.01,">1 nonsynonymous","S41V A105I",2
"lib2","SARS-CoV-2","ATATTTAACATCACAT",3,1.53,NA,NA,NA,NA,NA,NA,"stop","C61I N107* L125Y R179N",4
"lib2","SARS-CoV-2","ATATTTAACCGGCCCC",7,83.71,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","A14S S45L V77N G117L F160T",5
"lib2","SARS-CoV-2","ATATTTAAGCAGGCGC",6,3.09,NA,NA,NA,NA,NA,NA,"stop","T3V N64T D98E K114* S139Y V153R",6
"lib2","SARS-CoV-2","ATATTTAATAAAGTGT",4,13.91,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6R C49W L60M Y123D",4
"lib2","SARS-CoV-2","ATATTTACGACGTGAC",6,69.29,10.26,-0.57,0.07,2.69,1.08,0,">1 nonsynonymous","S43V P96D I138M",3
"lib2","SARS-CoV-2","ATATTTACGTGCATAC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","G9* R16S R25I N92T Y119I F134K P177S S184C",8
"lib2","SARS-CoV-2","ATATTTACTATGCACA",10,43.8,9.54,-1.3,0.09,1.88,1.07,0,">1 nonsynonymous","A14C F44P T85V",3
"lib2","SARS-CoV-2","ATATTTACTGACTGCA",11,136.53,10.4,-0.43,0.04,2.8,1.11,0,">1 nonsynonymous","K26S S41F",2
"lib2","SARS-CoV-2","ATATTTAGGAGCGATA",17,148.37,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y66E A89W S113I",3
"lib2","SARS-CoV-2","ATATTTAGGTGGCCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E C102R S113V F156S",4
"lib2","SARS-CoV-2","ATATTTAGGTGTTGTA",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P N120I N171K",3
"lib2","SARS-CoV-2","ATATTTATAAAGCGAT",14,49.36,6.18,-4.66,0.95,1.5,1.3,0.03,">1 nonsynonymous","C6A T100G",2
"lib2","SARS-CoV-2","ATATTTATAACTTACT",14,6.71,NA,NA,NA,NA,NA,NA,"stop","S19* C49F Y121S S147V Q176W",5
"lib2","SARS-CoV-2","ATATTTATACGAGATT",5,42.07,8.62,-2.22,0.14,2.49,1.07,0.01,">1 nonsynonymous","R27K A42E P96T Y119V",4
"lib2","SARS-CoV-2","ATATTTATCCACAAAG",3,59.18,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F99V R179S",2
"lib2","SARS-CoV-2","ATATTTATGACGGCCA",5,156.21,10.75,-0.09,0.05,2.95,1.05,0,">1 nonsynonymous","F8L T15D L122R Y178F",4
"lib2","SARS-CoV-2","ATATTTATGCCACATT",5,56.25,10.69,-0.14,0.06,2.73,1.19,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","ATATTTATTATCTGGG",1,23.86,8.85,-1.99,0.19,1.5,1.09,0.02,">1 nonsynonymous","F12S Q84F",2
"lib2","SARS-CoV-2","ATATTTCACCAGCGTA",5,1.3,NA,NA,NA,NA,NA,NA,"stop","N1Y N13D A18T V32R L122*",5
"lib2","SARS-CoV-2","ATATTTCATGACGGAG",19,130.7,8.22,-2.61,0.26,1.5,1.07,0.02,">1 nonsynonymous","C6N F99M L122V",3
"lib2","SARS-CoV-2","ATATTTCCAGGACAAA",6,23.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1W C6F V103A K198I",4
"lib2","SARS-CoV-2","ATATTTCCTACCTAGT",1,16.28,6,-4.84,2,1.5,1.05,0.03,">1 nonsynonymous","D68T Y119V",2
"lib2","SARS-CoV-2","ATATTTCGGGAAAGAA",1,19.01,6.17,-4.67,0.53,1.5,1.02,0.01,">1 nonsynonymous","V37I F47C Y119C T170L",4
"lib2","SARS-CoV-2","ATATTTCTAATTTCTT",2,40.7,9.42,-1.42,0.15,1.69,1.14,0.01,">1 nonsynonymous","L5F F12M T63I N64L",4
"lib2","SARS-CoV-2","ATATTTCTGATGCATT",5,12.78,6,-4.84,2,1.5,1.07,0.07,">1 nonsynonymous","F12V C49S K94I W106A S129Y",5
"lib2","SARS-CoV-2","ATATTTGACTATTAAG",2,26.95,7.26,-3.58,0.31,1.5,1.1,0.02,">1 nonsynonymous","G83L A105K Y123D P133L G166K",5
"lib2","SARS-CoV-2","ATATTTGAGCTGATGG",21,3.38,NA,NA,NA,NA,NA,NA,"stop","N40S I72M V77*",3
"lib2","SARS-CoV-2","ATATTTGCAAGAACAC",1,38.95,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D90Y G101I",2
"lib2","SARS-CoV-2","ATATTTGCAGATGCTT",14,218.02,6,-4.84,1.06,1.5,1.12,0,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","ATATTTGGGAAAATTA",10,163.44,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G83V F126A P133R",3
"lib2","SARS-CoV-2","ATATTTGGTCCTGCTA",1,8.46,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A18W P96E",2
"lib2","SARS-CoV-2","ATATTTGTATATTATG",2,21.06,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","Y91V P96H Y119D S129L",4
"lib2","SARS-CoV-2","ATATTTTAAACGCAGA",1,15.77,10.74,-0.1,0.08,2.98,1,0,">1 nonsynonymous","T55V T85P P197F",3
"lib2","SARS-CoV-2","ATATTTTAACGATATC",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* K94P G117M Q176H",4
"lib2","SARS-CoV-2","ATATTTTACAAAAAGC",7,76.6,6,-4.84,1.59,1.5,1.17,0.02,">1 nonsynonymous","S36L F99T A105D N110R",4
"lib2","SARS-CoV-2","ATATTTTACGGCCACA",3,18.71,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","I80K",1
"lib2","SARS-CoV-2","ATATTTTAGTAGAGTC",2,32.82,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L38Y T46D L131S T201M",4
"lib2","SARS-CoV-2","ATATTTTATCCGAAAC",3,28.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K26L G101I N107M G117L Q144I F156Q T170L",7
"lib2","SARS-CoV-2","ATATTTTCAGAACAAA",4,27.14,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I2T G86S I138N Y143R C195Y",5
"lib2","SARS-CoV-2","ATATTTTCAGTACCCG",14,189.08,10.32,-0.52,0.02,2.88,1.09,0,">1 nonsynonymous","S41A D59Y N120Y K198G",4
"lib2","SARS-CoV-2","ATATTTTGCCAATTAT",6,193.2,10.94,0.11,0.04,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATATTTTTAGTGTAGG",2,12.33,6,-4.84,2,3,1.16,0.05,">1 nonsynonymous","R73V L95P",2
"lib2","SARS-CoV-2","ATATTTTTTGGGACAA",6,176.65,10.71,-0.12,0.02,2.96,1.06,0,">1 nonsynonymous","R27K N40R N64W",3
"lib2","SARS-CoV-2","ATCAAAAAAAAACAAT",1,5.26,9.92,-0.91,0.12,2.73,1.04,0.01,">1 nonsynonymous","V11L Y123K Q144K P149H",4
"lib2","SARS-CoV-2","ATCAAAAAAATGAACC",2,47.12,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S36R K48E Y93V",3
"lib2","SARS-CoV-2","ATCAAAAAACGACTTT",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I Q176P",2
"lib2","SARS-CoV-2","ATCAAAAAAGCACTTA",12,127.49,8.49,-2.35,0.23,1.5,1.06,0.02,">1 nonsynonymous","G9H S69K L122A T140W",4
"lib2","SARS-CoV-2","ATCAAAAAGGGCCGGA",3,11.51,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","N107A Y121K T170N",3
"lib2","SARS-CoV-2","ATCAAAAATGGCTGTC",7,131.7,9.45,-1.38,0.05,2.75,1.09,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","ATCAAAACAACTCGCG",7,27.53,10.65,-0.18,0.06,2.9,1.1,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","ATCAAAACAGAGTTTA",2,17.17,10.14,-0.7,0.14,2.6,1,0.01,">1 nonsynonymous","A42T Y50W A105V",3
"lib2","SARS-CoV-2","ATCAAAACAGGGGAGC",7,19.84,6,-4.84,1.01,3,1.09,0.01,">1 nonsynonymous","C6S D68W Y123P E141C",4
"lib2","SARS-CoV-2","ATCAAAACATCATTAG",1,51.69,6.38,-4.45,0.45,1.5,1.16,0.01,">1 nonsynonymous","P54M G83R D90E N107M F160A",5
"lib2","SARS-CoV-2","ATCAAAACTAGCCAAT",6,24.95,7.48,-3.36,0.37,1.5,1,0.05,">1 nonsynonymous","N13I G146Y V173L",3
"lib2","SARS-CoV-2","ATCAAAAGAGGATTCT",7,249.62,7.85,-2.99,0.11,2.33,1.1,0,">1 nonsynonymous","G152D Y159N",2
"lib2","SARS-CoV-2","ATCAAAAGAGTGTTAC",6,21.2,8.94,-1.89,0.36,1.5,1,0.06,">1 nonsynonymous","A14L K94C",2
"lib2","SARS-CoV-2","ATCAAAAGCCCACATT",5,69.32,10.4,-0.43,0.05,2.84,1.13,0,">1 nonsynonymous","T63D G116W",2
"lib2","SARS-CoV-2","ATCAAAAGTAGGATAG",14,118.76,9.34,-1.49,0.08,1.73,1.04,0,">1 nonsynonymous","Y39L W106Y P133T",3
"lib2","SARS-CoV-2","ATCAAAAGTCTATAGT",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T F99V K114C",3
"lib2","SARS-CoV-2","ATCAAAAGTTAGACGT",10,64.81,6.68,-4.16,0.47,1.5,1.18,0.02,">1 nonsynonymous","N4V D90I Q144R P149N",4
"lib2","SARS-CoV-2","ATCAAAATAAAACACA",8,119.98,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37K K48W N58A I104L S113R",5
"lib2","SARS-CoV-2","ATCAAAATCACACCTA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","V20T R124T F156L Y175*",4
"lib2","SARS-CoV-2","ATCAAAATCTACGATT",1,5.86,9.05,-1.78,0.19,2.3,1,0.01,">1 nonsynonymous","K26W A42V E141S G174H",4
"lib2","SARS-CoV-2","ATCAAAATCTACGGAT",16,107.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37L G51Y V103L L122P",4
"lib2","SARS-CoV-2","ATCAAAATGTTCACCG",1,63.2,9.17,-1.66,0.07,3,1.06,0,">1 nonsynonymous","Y39E T148L G166T",3
"lib2","SARS-CoV-2","ATCAAAATTGGTAGAT",9,80.33,6,-4.84,1.85,1.5,1.19,0.03,">1 nonsynonymous","L38M P54Q W106V T170E",4
"lib2","SARS-CoV-2","ATCAAACAATTCCTGT",4,34.28,10.67,-0.17,0.08,2.83,1.18,0,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","ATCAAACACTACGAAA",8,1.11,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","ATCAAACCAAATATAA",3,21.79,10.87,0.03,0.08,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAACCCATAGTAA",6,265.43,9.63,-1.21,0.07,2.52,1.07,0,">1 nonsynonymous","C6G A18S P149F",3
"lib2","SARS-CoV-2","ATCAAACCTTAATCCA",11,3.57,NA,NA,NA,NA,NA,NA,"stop","Y21L T55Q D68* C158Y",4
"lib2","SARS-CoV-2","ATCAAACGAGGAGTAA",13,89.69,9.56,-1.28,0.08,1.79,1.04,0,">1 nonsynonymous","G51F E141L",2
"lib2","SARS-CoV-2","ATCAAACGATTGAACA",2,15.38,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N107S L131Y",2
"lib2","SARS-CoV-2","ATCAAACGCTAAGAAA",6,1.56,NA,NA,NA,NA,NA,NA,"stop","G9* N58Y E141* F156W",4
"lib2","SARS-CoV-2","ATCAAACGGAAAAAAA",1,29.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33S Y91K C158W",3
"lib2","SARS-CoV-2","ATCAAACGGACAGGTA",1,0.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N130Y",1
"lib2","SARS-CoV-2","ATCAAACTAGTAGCTT",1,85.73,10.76,-0.08,0.04,2.96,1.06,0,"1 nonsynonymous","F160D",1
"lib2","SARS-CoV-2","ATCAAACTTACGATGA",3,100.15,10.29,-0.54,0.04,2.79,1.09,0,"1 nonsynonymous","N13W",1
"lib2","SARS-CoV-2","ATCAAAGACACAGGTA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F L57P G116H F160V",4
"lib2","SARS-CoV-2","ATCAAAGACATATAAG",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S N30T Q144L",3
"lib2","SARS-CoV-2","ATCAAAGACCATAATT",3,36.59,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A22M D34V Y93T",3
"lib2","SARS-CoV-2","ATCAAAGATAAATACA",1,15.45,9.75,-1.09,0.11,2.35,1.02,0.01,">1 nonsynonymous","T15Y A105S Y143F N151S",4
"lib2","SARS-CoV-2","ATCAAAGATACGATAC",3,0.19,NA,NA,NA,NA,NA,NA,"stop","F44R D59*",2
"lib2","SARS-CoV-2","ATCAAAGCACCATTAT",2,43.26,6,-4.84,2,3,1.14,0,">1 nonsynonymous","P7G A18T A145F F167H",4
"lib2","SARS-CoV-2","ATCAAAGGAACAAATC",24,88.02,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F99S I138M",2
"lib2","SARS-CoV-2","ATCAAAGGCACTAACG",1,31.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33T S41D E141F G172R",4
"lib2","SARS-CoV-2","ATCAAAGTAGAAAGGT",14,60.48,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V77G N120K G146C",3
"lib2","SARS-CoV-2","ATCAAAGTCCTCCACC",5,0.08,NA,NA,NA,NA,NA,NA,"stop","D68H T100M P149*",3
"lib2","SARS-CoV-2","ATCAAAGTGAATCCAC",3,18.29,9.86,-0.98,0.1,2.34,1.05,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","ATCAAAGTTACAGCCT",3,29.49,10.75,-0.09,0.04,2.97,1.04,0,">1 nonsynonymous","L5Y G83Q",2
"lib2","SARS-CoV-2","ATCAAAGTTGATGGTA",4,72.19,9.58,-1.26,0.06,2.92,1.06,0,">1 nonsynonymous","I104L N109Y P197T",3
"lib2","SARS-CoV-2","ATCAAATAAACACATG",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q S19G",2
"lib2","SARS-CoV-2","ATCAAATAAATGTTCA",6,25.99,10.6,-0.24,0.12,2.78,1.08,0.01,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","ATCAAATAGAAGCAAT",1,10.21,10.88,0.04,0.12,2.89,1.13,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","ATCAAATATTTTGAGT",4,77.35,10.79,-0.05,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAATCATAAAACC",10,59.45,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","G9L Y50T F62E I104C L122Q C158H",6
"lib2","SARS-CoV-2","ATCAAATCGAAAAGGA",10,256.23,10.4,-0.43,0.04,2.83,1.03,0,"1 nonsynonymous","R136V",1
"lib2","SARS-CoV-2","ATCAAATCTAAGATAG",4,86.85,10.27,-0.56,0.02,2.94,1.04,0,">1 nonsynonymous","E10V S36G",2
"lib2","SARS-CoV-2","ATCAAATCTACCGATA",4,23.52,10.94,0.11,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAATGAATATATC",3,49.83,10.41,-0.42,0.06,2.91,1.04,0,">1 nonsynonymous","F44T N58D",2
"lib2","SARS-CoV-2","ATCAAATGATAATGAA",3,81.46,10.82,-0.01,0.05,2.98,1.05,0,"1 nonsynonymous","L60C",1
"lib2","SARS-CoV-2","ATCAAATGCGAATTAG",5,93.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K114P F126R Q168L S184A",4
"lib2","SARS-CoV-2","ATCAAATGCTGGAACG",17,218.36,10.62,-0.21,0.02,2.96,1.04,0,">1 nonsynonymous","T85G D97I P197E",3
"lib2","SARS-CoV-2","ATCAAATGGAACACTT",9,235.84,10.78,-0.05,0.04,2.9,1.1,0,"1 nonsynonymous","S147R",1
"lib2","SARS-CoV-2","ATCAAATGGACTTAGA",1,8.31,9.82,-1.02,0.14,2.77,1.17,0.01,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","ATCAAATTCCTCGGGA",7,167.12,10.83,-0.01,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAATTGAAACCGC",1,15.54,9.46,-1.37,0.09,2.53,1,0,">1 nonsynonymous","C6F A14C T201D",3
"lib2","SARS-CoV-2","ATCAACAACAAAGACT",7,106,9.94,-0.9,0.05,2.25,1.01,0,">1 nonsynonymous","D59G T100E P133G T201L",4
"lib2","SARS-CoV-2","ATCAACAACAATAAGT",11,86.93,10.78,-0.06,0.05,2.91,1.11,0,"1 nonsynonymous","T63H",1
"lib2","SARS-CoV-2","ATCAACAACCTTTTGC",3,5.22,10.06,-0.77,0.22,2.7,1,0.01,">1 nonsynonymous","S41V A81V",2
"lib2","SARS-CoV-2","ATCAACAATGAACGGA",7,123.42,10.77,-0.07,0.05,2.96,1.05,0,">1 nonsynonymous","A42V V173Q",2
"lib2","SARS-CoV-2","ATCAACACTAAAATTA",5,69.38,10.43,-0.41,0.06,3,1.04,0,">1 nonsynonymous","A89P A190D",2
"lib2","SARS-CoV-2","ATCAACACTAATCATG",1,19.25,8.38,-2.46,0.19,1.92,1.12,0.02,">1 nonsynonymous","P54V C61I G116H P161A",4
"lib2","SARS-CoV-2","ATCAACACTGGTGATT",11,120.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36P N107V Y178D",3
"lib2","SARS-CoV-2","ATCAACAGAACAGAAT",4,27.24,10.8,-0.03,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAACAGGAGGTGAT",5,1.43,NA,NA,NA,NA,NA,NA,"stop","P96R R136G Y143*",3
"lib2","SARS-CoV-2","ATCAACAGGCACTATA",12,117.23,9.5,-1.34,0.1,1.5,1.07,0,">1 nonsynonymous","K48H Y91G T100Y",3
"lib2","SARS-CoV-2","ATCAACATAAGATTAA",4,57.32,10.55,-0.28,0.03,2.93,1.05,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","ATCAACATAGGGGGAT",11,71.79,6.94,-3.9,0.31,1.5,1.13,0.02,">1 nonsynonymous","K87F L95P",2
"lib2","SARS-CoV-2","ATCAACATCAACCAAA",3,107.24,10.6,-0.24,0.04,2.93,1.04,0,">1 nonsynonymous","T63F E141D F160R",3
"lib2","SARS-CoV-2","ATCAACATTGCGCATC",2,11.42,10.85,0.02,0.09,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCAACCAACACTTAC",2,33.91,10.72,-0.11,0.07,2.98,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCAACCACTAGTATT",3,18.09,10.46,-0.38,0.06,3,1.05,0,">1 nonsynonymous","K87N Q163H",2
"lib2","SARS-CoV-2","ATCAACCATAAATCCC",1,10.87,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T55G C61K T85I N92Y G117K",5
"lib2","SARS-CoV-2","ATCAACCCTAATCGAG",1,13.97,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","R16I E135V L162Y T170M P177Y",5
"lib2","SARS-CoV-2","ATCAACCGCCCAATGC",5,3.09,NA,NA,NA,NA,NA,NA,"stop","W23C V37Y Y50C I88* L95V V103Y S147F E154D",8
"lib2","SARS-CoV-2","ATCAACCGCGTCTTAA",9,82.85,10.84,0.01,0.03,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAACCTCAAATTGT",4,12.96,10.64,-0.2,0.09,2.93,1.01,0.01,">1 nonsynonymous","L5K A105T",2
"lib2","SARS-CoV-2","ATCAACCTCTCCAGTA",3,0.65,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","ATCAACCTGAGCAACA",3,25.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P7I F44C C49Y T148I",4
"lib2","SARS-CoV-2","ATCAACCTGCCAATTT",7,38.24,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D34I F44L G74R K87A A89S Q168K P177S",7
"lib2","SARS-CoV-2","ATCAACGACCACTGCC",2,69.75,10.63,-0.21,0.03,2.97,1.05,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","ATCAACGAGAACCAAC",7,28.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S19E R78I P133L G174E",4
"lib2","SARS-CoV-2","ATCAACGCGCCACGCC",12,215.39,10.78,-0.05,0.04,2.96,1.05,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","ATCAACGGTGAACCGC",4,50.91,8.28,-2.56,0.11,2.54,1.07,0.01,">1 nonsynonymous","F44L D98G G166T",3
"lib2","SARS-CoV-2","ATCAACGTAAACTGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","N40* K114H",2
"lib2","SARS-CoV-2","ATCAACGTACCAAATC",1,6.85,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F17P Y21F G74K K128A L162S",5
"lib2","SARS-CoV-2","ATCAACGTTCTAGTTA",9,238.76,10.19,-0.64,0.04,2.79,1.06,0,">1 nonsynonymous","D34E K114Y A190T",3
"lib2","SARS-CoV-2","ATCAACTAAAGAGCAT",7,63.61,7.95,-2.89,0.15,1.96,1.13,0.01,">1 nonsynonymous","Y50I T85F L125N",3
"lib2","SARS-CoV-2","ATCAACTAATTTACCG",5,0.09,NA,NA,NA,NA,NA,NA,"stop","R16* N110V Y121L S184L",4
"lib2","SARS-CoV-2","ATCAACTACCTCAATT",28,321,10.13,-0.71,0.05,2.61,1.01,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","ATCAACTATCATAGAA",4,36.81,10.7,-0.14,0.07,2.91,1.06,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","ATCAACTCCTGTCAGC",10,134.32,10.78,-0.06,0.07,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAACTCGTCGGTAA",11,160.11,6,-4.84,1.87,1.5,1.13,0,">1 nonsynonymous","Y35P S113W N120S",3
"lib2","SARS-CoV-2","ATCAACTCTCTTCATT",14,150.57,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N64I V71E Y91N L122P F156Q P197C",6
"lib2","SARS-CoV-2","ATCAACTCTGCTACTG",5,12.69,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D97I F167G",2
"lib2","SARS-CoV-2","ATCAACTGAATATTAT",5,16.81,9.3,-1.53,0.2,1.56,1.09,0.02,">1 nonsynonymous","F8S S129I S184A",3
"lib2","SARS-CoV-2","ATCAACTGATATACAT",3,113.56,10.69,-0.15,0.03,2.97,1.04,0,">1 nonsynonymous","T85Q Y121F",2
"lib2","SARS-CoV-2","ATCAACTTCTCGCCAA",7,86.83,10.76,-0.08,0.03,2.95,1.04,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","ATCAACTTGAAAAGCC",3,11.25,10.78,-0.05,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAACTTTGAAGATC",6,9.32,NA,NA,NA,NA,NA,NA,"stop","A89Q C102I R127* G155A Q176*",5
"lib2","SARS-CoV-2","ATCAACTTTGATAATA",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G166E R179D",2
"lib2","SARS-CoV-2","ATCAAGAAAAACATCG",8,89.84,10.82,-0.02,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAGAAAAACTTTA",3,168.94,10.42,-0.41,0.04,2.93,1.04,0,">1 nonsynonymous","L5D Y178T",2
"lib2","SARS-CoV-2","ATCAAGAAAGTGCCTT",2,78.14,10.84,0,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAGAAATTCAATT",1,8.11,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","R127V",1
"lib2","SARS-CoV-2","ATCAAGAACAAAAAAG",9,85.57,6.76,-4.08,0.26,1.5,1.11,0.01,">1 nonsynonymous","E76F F134A",2
"lib2","SARS-CoV-2","ATCAAGAACTTTCACG",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* T170F L183G K199L",4
"lib2","SARS-CoV-2","ATCAAGAAGTACGAAT",14,204.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N N92E K199Y",3
"lib2","SARS-CoV-2","ATCAAGAAGTCGGACA",2,4.67,NA,NA,NA,NA,NA,NA,"stop","C6T S45G D98* Q144* P149T P169*",6
"lib2","SARS-CoV-2","ATCAAGAATGCCCGAA",18,230.29,9.26,-1.57,0.04,2.93,1.08,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","ATCAAGAATTGAAATA",9,110.57,9.66,-1.18,0.04,2.93,1.05,0,">1 nonsynonymous","N4T S113T T201R",3
"lib2","SARS-CoV-2","ATCAAGACATAAGACT",3,52.37,10.68,-0.16,0.03,2.92,1.09,0,"1 nonsynonymous","L57M",1
"lib2","SARS-CoV-2","ATCAAGACGTCACAAG",1,13.31,7.54,-3.29,0.22,1.86,1.06,0.02,">1 nonsynonymous","C150F E154R",2
"lib2","SARS-CoV-2","ATCAAGACTCGACCTG",3,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H S69R D90R D98C",4
"lib2","SARS-CoV-2","ATCAAGAGATTCTTAA",8,133.03,10.82,-0.02,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAGAGCTGGAACT",1,20.7,9.58,-1.25,0.1,2.05,1,0,">1 nonsynonymous","A14M L57D R78K P149L",4
"lib2","SARS-CoV-2","ATCAAGATAAGTAGTG",7,73.46,10.24,-0.6,0.08,2.68,1.09,0,">1 nonsynonymous","T15S V103I E141F",3
"lib2","SARS-CoV-2","ATCAAGATACGAAATG",2,43.73,9.53,-1.31,0.1,1.9,1.04,0,">1 nonsynonymous","S19K R27E K48N",3
"lib2","SARS-CoV-2","ATCAAGATATATGAAA",8,1.19,NA,NA,NA,NA,NA,NA,"stop","Y39* N58Q W106K",3
"lib2","SARS-CoV-2","ATCAAGATTGTACCTC",12,92.43,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y50L Q144C",2
"lib2","SARS-CoV-2","ATCAAGATTGTGAGAT",5,17.01,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","D90N A105N S129H G174V",4
"lib2","SARS-CoV-2","ATCAAGATTTATTCAC",4,102.9,10.15,-0.68,0.03,2.88,1.05,0,">1 nonsynonymous","T63P G116S",2
"lib2","SARS-CoV-2","ATCAAGCACCTACGGC",4,109.47,10.41,-0.43,0.05,2.9,1.03,0,"1 nonsynonymous","D59P",1
"lib2","SARS-CoV-2","ATCAAGCAGGCCCAAT",12,176.92,9.28,-1.56,0.08,1.81,1.11,0,">1 nonsynonymous","P7A G83F P133M T201D",4
"lib2","SARS-CoV-2","ATCAAGCAGTTATGTG",1,49.86,10.12,-0.71,0.09,2.68,1,0,">1 nonsynonymous","N4Y N58Y",2
"lib2","SARS-CoV-2","ATCAAGCATTCCCAAG",4,0.4,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","ATCAAGCATTGAGCCG",2,52.21,8.5,-2.34,0.15,2.8,1.13,0.01,">1 nonsynonymous","T85N S147H N157L",3
"lib2","SARS-CoV-2","ATCAAGCCACTAGACG",5,71.97,10.11,-0.73,0.05,2.74,1.12,0,">1 nonsynonymous","I2K N24V F44L",3
"lib2","SARS-CoV-2","ATCAAGCCCAAATGGT",3,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D Y21A Q168L P177Q V181K",5
"lib2","SARS-CoV-2","ATCAAGCCTCTGGCAG",5,25.08,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","P96S S113T Q144H T148D",4
"lib2","SARS-CoV-2","ATCAAGCCTTATGAAA",2,17.2,10.82,-0.01,0.09,2.97,1.07,0.01,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","ATCAAGCTACACGATC",4,17.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6N A33S V77M P82N",4
"lib2","SARS-CoV-2","ATCAAGCTTAAAATAT",2,42.98,9.08,-1.76,0.09,1.99,1.03,0,">1 nonsynonymous","V20S F160V",2
"lib2","SARS-CoV-2","ATCAAGCTTGAACGAA",1,8.54,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","Q84L T85M C102T N107L",4
"lib2","SARS-CoV-2","ATCAAGGCCACATACA",6,78.45,8.33,-2.51,0.14,1.6,1.15,0.01,">1 nonsynonymous","I80L G116V F134L",3
"lib2","SARS-CoV-2","ATCAAGGGGCAGACTG",2,16.89,10.2,-0.63,0.05,2.89,1.01,0,">1 nonsynonymous","P96N K114S",2
"lib2","SARS-CoV-2","ATCAAGGTTAAACATC",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y P96R D98N I104M S113T Q144C P197K",7
"lib2","SARS-CoV-2","ATCAAGTAAGCAAAAA",10,37.76,6,-4.84,1.97,1.5,1.16,0.02,">1 nonsynonymous","A42M Y50T S53F I138K P169V",5
"lib2","SARS-CoV-2","ATCAAGTAGTGAAATA",2,30.72,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","A18K W106R P161S",3
"lib2","SARS-CoV-2","ATCAAGTCGCCCGTTC",2,17.72,6,-4.84,2,3,1.14,0.01,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","ATCAAGTCTTACGTAT",5,31.69,10.73,-0.11,0.06,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAAGTGAATCGAAC",9,6.7,NA,NA,NA,NA,NA,NA,"stop","S36K K56M N118*",3
"lib2","SARS-CoV-2","ATCAAGTGACGACGTG",2,53.86,10.63,-0.2,0.07,2.94,1.07,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","ATCAATAAAAGCATCT",10,0.44,NA,NA,NA,NA,NA,NA,"stop","T3L A42* Y93D N107K K198E",5
"lib2","SARS-CoV-2","ATCAATAAATGCAATG",1,22.93,10.86,0.02,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAATAACATAGTAT",2,29.94,10.78,-0.05,0.06,3,1.01,0,">1 nonsynonymous","L5H T201V",2
"lib2","SARS-CoV-2","ATCAATACAAAGCAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14S S36R F62* Y91I L188P",5
"lib2","SARS-CoV-2","ATCAATACACCCTCTT",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E Q168R T201Q",3
"lib2","SARS-CoV-2","ATCAATACACCGAACC",5,42.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G155S R179P",2
"lib2","SARS-CoV-2","ATCAATACAGAAACTT",2,34.51,7.72,-3.12,0.19,1.68,1.12,0.01,">1 nonsynonymous","L57H F126G",2
"lib2","SARS-CoV-2","ATCAATACATACAGTA",2,23.09,10.77,-0.06,0.07,2.87,1.08,0,">1 nonsynonymous","V37W G116W",2
"lib2","SARS-CoV-2","ATCAATACATGTGAAC",9,54.15,7.92,-2.91,0.24,1.5,1.03,0.03,">1 nonsynonymous","F47S D90F",2
"lib2","SARS-CoV-2","ATCAATACGCCCGAAA",8,192.8,8.72,-2.11,0.05,2.1,1.1,0,">1 nonsynonymous","S29V Q176L",2
"lib2","SARS-CoV-2","ATCAATACTTGAGATA",1,31.32,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","I88L C158S",2
"lib2","SARS-CoV-2","ATCAATAGCACAAAAA",7,129.36,10.79,-0.05,0.03,2.95,1.06,0,">1 nonsynonymous","A22S N130H",2
"lib2","SARS-CoV-2","ATCAATAGGGGGTATA",1,7.3,6.11,-4.73,2,1.5,1.14,0.02,">1 nonsynonymous","S19A L95S L122Q",3
"lib2","SARS-CoV-2","ATCAATAGGTGAACGA",1,74.77,10.28,-0.55,0.09,2.58,1,0,">1 nonsynonymous","N1V G83D P191R",3
"lib2","SARS-CoV-2","ATCAATATCGTCATTA",8,47.42,10.7,-0.13,0.05,2.87,1.13,0,">1 nonsynonymous","S36A T85K T140L",3
"lib2","SARS-CoV-2","ATCAATATGCTTCTTA",2,5.03,10.17,-0.67,0.11,2.89,1,0,">1 nonsynonymous","A33D T201Y",2
"lib2","SARS-CoV-2","ATCAATATTATATGAG",3,1162.91,10.02,-0.82,0.03,2.85,1.03,0,">1 nonsynonymous","Y165M P197S",2
"lib2","SARS-CoV-2","ATCAATCAAAAATCGG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N92V V103R Y121T K132*",4
"lib2","SARS-CoV-2","ATCAATCAAAGAGTAT",1,72.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9W G83C G101F E135R",4
"lib2","SARS-CoV-2","ATCAATCAAAGGCCAC",2,19.29,10.86,0.02,0.04,2.99,1.03,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","ATCAATCAACGCCTGC",2,6.22,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N4C A42V G83H L95S A105Y E135S",6
"lib2","SARS-CoV-2","ATCAATCAGTACAACC",2,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T K56N W106M R127L G172R",5
"lib2","SARS-CoV-2","ATCAATCCACATGTTA",3,32.84,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T3L Y35R D90R D112L F134P",5
"lib2","SARS-CoV-2","ATCAATCCATCTGCAT",1,12.91,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","Y35T V77M L131R",3
"lib2","SARS-CoV-2","ATCAATCCATGCTTTG",5,56.28,10.62,-0.22,0.03,2.96,1.04,0,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","ATCAATCCGTCAGAAA",4,113.67,10.85,0.01,0.04,2.99,1.02,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","ATCAATCGCGTTTTTG",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N C49W T201N",3
"lib2","SARS-CoV-2","ATCAATCGTCTCCCCT",2,19.16,9.17,-1.66,0.17,1.9,1.1,0.02,">1 nonsynonymous","Y66C N120S G152I",3
"lib2","SARS-CoV-2","ATCAATCTGAAGTTTG",7,146.75,10.24,-0.6,0.05,2.75,1.1,0,">1 nonsynonymous","V77T I138T",2
"lib2","SARS-CoV-2","ATCAATCTGTTCATAT",8,63.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R124N G152I",2
"lib2","SARS-CoV-2","ATCAATCTTATAATAC",11,4.05,NA,NA,NA,NA,NA,NA,"stop","N110*",1
"lib2","SARS-CoV-2","ATCAATGAAAATTTAA",11,67.04,8.51,-2.33,0.13,1.65,1.14,0.01,">1 nonsynonymous","G86N N151L",2
"lib2","SARS-CoV-2","ATCAATGATAGACCGC",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35* G83L G146Q G152N",4
"lib2","SARS-CoV-2","ATCAATGATAGAGTTA",1,7.75,9.83,-1.01,0.07,3,1.01,0,">1 nonsynonymous","F44T T100L S129L",3
"lib2","SARS-CoV-2","ATCAATGATGTTGTTA",1,22.05,9.37,-1.47,0.1,2.81,1.03,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","ATCAATGCAAAAGACA",7,16.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F8H N58F P82R",3
"lib2","SARS-CoV-2","ATCAATGCACAAGCCT",3,10.85,10.8,-0.04,0.07,2.96,1.04,0,">1 nonsynonymous","P54M K132N",2
"lib2","SARS-CoV-2","ATCAATGCGTCTCGTC",3,10.39,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T63D D112V Q144A P149L",4
"lib2","SARS-CoV-2","ATCAATGGAAGGTGGA",3,41.74,10.82,-0.01,0.05,2.99,1.02,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","ATCAATGTAACGAGAG",2,0.53,NA,NA,NA,NA,NA,NA,"stop","V37* F99Y",2
"lib2","SARS-CoV-2","ATCAATGTTAAAGGAA",3,43.57,9.66,-1.17,0.05,2.84,1,0,">1 nonsynonymous","S36E S45A L57N L122R T170S S184V",6
"lib2","SARS-CoV-2","ATCAATGTTAAATAGT",3,10.08,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C31G T85R P96S Y119I E154K T201P",6
"lib2","SARS-CoV-2","ATCAATTAACTCGGGC",6,110.07,10.37,-0.47,0.03,2.99,1.01,0,">1 nonsynonymous","A33E T100V",2
"lib2","SARS-CoV-2","ATCAATTAATGTATGT",11,137.28,10.85,0.02,0.04,2.92,1.09,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","ATCAATTGACACTTAG",2,46.11,8.61,-2.23,0.15,1.62,1.14,0.01,">1 nonsynonymous","G9M G86A K198S",3
"lib2","SARS-CoV-2","ATCAATTGTTACTTAT",6,1.46,NA,NA,NA,NA,NA,NA,"stop","N30* G74I K94S",3
"lib2","SARS-CoV-2","ATCAATTTAAATGAAC",1,0.08,NA,NA,NA,NA,NA,NA,"stop","V77A A89H L131* T148S P169V",5
"lib2","SARS-CoV-2","ATCAATTTACGGGACA",5,10.62,6,-4.84,2,2.87,1.09,0,">1 nonsynonymous","K56A A89H V103A L183I",4
"lib2","SARS-CoV-2","ATCAATTTATTTGAAG",7,88.32,10.04,-0.79,0.05,2.91,1.02,0,">1 nonsynonymous","I142L G155W",2
"lib2","SARS-CoV-2","ATCAATTTGGAAAGGA",4,32.68,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G101L N130G F160G",3
"lib2","SARS-CoV-2","ATCAATTTTGATGCAA",1,10.98,8.72,-2.11,0.18,3,1.08,0.02,">1 nonsynonymous","L5M S113Q",2
"lib2","SARS-CoV-2","ATCACAAAAACATTCA",7,127.55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4W S19L C31P Y93V",4
"lib2","SARS-CoV-2","ATCACAAAAGTCACGG",5,72.81,10.77,-0.06,0.04,2.99,1.01,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","ATCACAAACAAAGCCA",2,31.54,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C31A K56W P82V",3
"lib2","SARS-CoV-2","ATCACAAACCCTAGCA",9,154.12,10.83,-0.01,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACAACCCTCATTT",3,31.27,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","D75T G86S Y91P T201A",4
"lib2","SARS-CoV-2","ATCACAACGAGGCGAA",7,43.5,10.83,-0.01,0.08,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACAACGTAAATAG",8,176.3,10.85,0.02,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACAACGTCTGAAA",7,33,6,-4.84,2,3,1.36,0,">1 nonsynonymous","F44L L183K",2
"lib2","SARS-CoV-2","ATCACAACGTTTAAAC",8,3.96,NA,NA,NA,NA,NA,NA,"stop","G9Y K94* F99I",3
"lib2","SARS-CoV-2","ATCACAACTGTAGGGT",12,170.62,9.53,-1.31,0.03,2.92,1.04,0,">1 nonsynonymous","L125H G146S",2
"lib2","SARS-CoV-2","ATCACAAGATATGATA",8,52.16,9.86,-0.97,0.2,1.5,1.05,0.02,">1 nonsynonymous","G51S K56N C61F C150S",4
"lib2","SARS-CoV-2","ATCACAAGTTGAGCGA",4,19.96,9.93,-0.91,0.24,2.1,1.19,0.03,">1 nonsynonymous","V20A T85S D98P",3
"lib2","SARS-CoV-2","ATCACAATAAAAAACT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y119* R179T",2
"lib2","SARS-CoV-2","ATCACAATACTAGGTT",3,0.21,NA,NA,NA,NA,NA,NA,"stop","Q79* Q168E",2
"lib2","SARS-CoV-2","ATCACAATCATTGTTC",4,76.41,6,-4.84,0.96,1.5,1.17,0.01,">1 nonsynonymous","L38S G174C S184M",3
"lib2","SARS-CoV-2","ATCACAATCGTGGGGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M K128Y P169R Y178I",4
"lib2","SARS-CoV-2","ATCACACAAAAAATGG",10,101.62,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A22L Y50V T140S",3
"lib2","SARS-CoV-2","ATCACACAAATTAGAC",3,66.5,10.78,-0.05,0.07,2.93,1.11,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","ATCACACAATTCGTGT",2,40.12,10.86,0.02,0.04,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACACACTAGGGCT",1,35.61,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y21K W106V F156S V181E",4
"lib2","SARS-CoV-2","ATCACACAGAAAAAAT",1,17.04,10.12,-0.72,0.09,2.47,1.05,0.01,">1 nonsynonymous","T15L A42C F62N",3
"lib2","SARS-CoV-2","ATCACACAGTCGAATT",3,35.43,10.77,-0.06,0.05,2.93,1.11,0,"1 nonsynonymous","K56Q",1
"lib2","SARS-CoV-2","ATCACACATAACTAAG",13,145.91,10.69,-0.14,0.02,2.96,1.05,0,">1 nonsynonymous","K87F N130L",2
"lib2","SARS-CoV-2","ATCACACATTGGTCAA",4,37.19,8.98,-1.85,0.14,1.5,1.04,0.01,">1 nonsynonymous","I2Y P96T P133M G152N T201K",5
"lib2","SARS-CoV-2","ATCACACCAATCGTTT",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S Y91F V115R G172M Y178T",5
"lib2","SARS-CoV-2","ATCACACCACTCGCAT",2,30.35,10.84,0,0.08,2.91,1.11,0,">1 nonsynonymous","I142M Q168R",2
"lib2","SARS-CoV-2","ATCACACCATAGGTCC",4,46.71,10.69,-0.15,0.05,3,1,0,"1 nonsynonymous","L162V",1
"lib2","SARS-CoV-2","ATCACACCTAGAACGT",2,16,10.77,-0.07,0.07,2.93,1.1,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","ATCACACCTTTGGTTC",1,12.38,6,-4.84,2,3,1.09,0,">1 nonsynonymous","K94D F99L F126S C150G H189R",5
"lib2","SARS-CoV-2","ATCACACGCAATGAAT",1,18.14,10.8,-0.04,0.05,3,1.01,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","ATCACACGCAGCACGG",1,33.78,10.97,0.14,0.07,2.88,1.1,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","ATCACACGGAACCATA",2,19.5,8.47,-2.36,0.08,2.69,1.05,0,">1 nonsynonymous","L5G Y35A Y119I",3
"lib2","SARS-CoV-2","ATCACACGTGAATTTT",2,38.42,9.69,-1.15,0.11,2.06,1.05,0,">1 nonsynonymous","F44I Y91N R136K T148V",4
"lib2","SARS-CoV-2","ATCACACTACCGATTT",9,108.81,10.44,-0.39,0.05,2.86,1.06,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","ATCACAGAAAGAAGCC",3,89.3,10.83,0,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACAGATACTCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P D97M P133E Y175G",4
"lib2","SARS-CoV-2","ATCACAGCACAGACTG",12,2.71,NA,NA,NA,NA,NA,NA,"stop","V37* F62V Y123R S184N",4
"lib2","SARS-CoV-2","ATCACAGCAGTTGATT",2,55.51,10.23,-0.6,0.03,2.95,1.02,0,">1 nonsynonymous","G9A S129T I138L G146W",4
"lib2","SARS-CoV-2","ATCACAGGAAAACCTA",9,96.2,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","N92M S113D",2
"lib2","SARS-CoV-2","ATCACAGGAAACAGAT",1,29.03,9.22,-1.62,0.09,2.65,1.1,0,">1 nonsynonymous","C6L K56S G146T Q168H",4
"lib2","SARS-CoV-2","ATCACAGGATTGACAT",4,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I F99C D112S L125W R136P",5
"lib2","SARS-CoV-2","ATCACAGGCATTACCT",7,171.67,9.91,-0.93,0.07,2.25,1.02,0,">1 nonsynonymous","P149S V173S",2
"lib2","SARS-CoV-2","ATCACAGGCTTTTCGC",14,126.9,10.82,-0.02,0.05,2.95,1.07,0,"1 nonsynonymous","F44W",1
"lib2","SARS-CoV-2","ATCACAGGTATAAACA",4,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54C F70K V103E R136Q F185D",5
"lib2","SARS-CoV-2","ATCACAGGTATAAGTA",1,5.73,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","A14L N92I N120L",3
"lib2","SARS-CoV-2","ATCACAGGTCATATAC",3,63.31,9.05,-1.78,0.07,2.97,1.04,0,">1 nonsynonymous","K26I G117L",2
"lib2","SARS-CoV-2","ATCACAGTTAAGACAC",4,21.61,6.33,-4.5,0.22,1.65,1.04,0,">1 nonsynonymous","C158I P197T",2
"lib2","SARS-CoV-2","ATCACAGTTACCTTAA",8,4.67,NA,NA,NA,NA,NA,NA,"stop","S43T D75R D97R N107*",4
"lib2","SARS-CoV-2","ATCACATAAGCGGAAC",2,2.03,NA,NA,NA,NA,NA,NA,"stop","L38S P96L F99L G174*",4
"lib2","SARS-CoV-2","ATCACATAAGTACTTT",2,66.35,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G172T V180M",2
"lib2","SARS-CoV-2","ATCACATACCCTGACG",2,51.6,10.72,-0.12,0.05,2.94,1.04,0,">1 nonsynonymous","C61V D90R N120E K199L",4
"lib2","SARS-CoV-2","ATCACATACTGCGGGC",1,50.61,8.78,-2.05,0.08,2.78,1.12,0,">1 nonsynonymous","T85V I142R",2
"lib2","SARS-CoV-2","ATCACATAGATAACGA",12,58.57,6,-4.84,1.7,3,1.13,0,">1 nonsynonymous","L60R I104D Y165G",3
"lib2","SARS-CoV-2","ATCACATGAAACCAAT",3,56.64,8.61,-2.22,0.12,2.35,1.11,0,">1 nonsynonymous","S41W K87A N107Q",3
"lib2","SARS-CoV-2","ATCACATGAACTATAG",5,8.87,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L5N R25S Y93L I138L Q144R",5
"lib2","SARS-CoV-2","ATCACATGATCCCATC",4,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M D97K C102R D112I G146L T201H",6
"lib2","SARS-CoV-2","ATCACATGTATTACAT",2,40.59,6.19,-4.64,0.49,1.5,1.11,0.01,">1 nonsynonymous","T3S E10G F44C I142N",4
"lib2","SARS-CoV-2","ATCACATTAGGCCCCA",4,331.29,10.66,-0.17,0.02,2.93,1.07,0,"1 nonsynonymous","N110P",1
"lib2","SARS-CoV-2","ATCACATTTTTCCTCT",5,176.13,6.35,-4.49,0.28,1.5,1.1,0.01,">1 nonsynonymous","G166I T170I",2
"lib2","SARS-CoV-2","ATCACCAAAACAAAGG",1,15.32,10.62,-0.22,0.12,2.73,1.06,0,">1 nonsynonymous","N4V G152S",2
"lib2","SARS-CoV-2","ATCACCAAAGATACAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATCACCAAATACGCAG",11,79.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y21H A33G V37R F62M G101Y I138F T170V",7
"lib2","SARS-CoV-2","ATCACCAAATCATGCA",3,6.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F D90K N107R Q168T G174L",5
"lib2","SARS-CoV-2","ATCACCAACAGTTGAG",4,10.69,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A105E P149G",2
"lib2","SARS-CoV-2","ATCACCAAGAACTAGA",6,37.24,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","C49D F99N L162C",3
"lib2","SARS-CoV-2","ATCACCAAGTGTCTAC",1,11.45,6,-4.83,1.47,1.5,1.12,0.03,">1 nonsynonymous","P96F V115Y F134S E154T F167L",5
"lib2","SARS-CoV-2","ATCACCACTATTAGAA",2,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V R127F",2
"lib2","SARS-CoV-2","ATCACCAGGCTAATTG",10,3.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","ATCACCAGTCAAGTAA",6,0.32,NA,NA,NA,NA,NA,NA,"stop","I88* K128Y",2
"lib2","SARS-CoV-2","ATCACCATTCGCTTTC",2,29.38,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L5N E76G S113M",3
"lib2","SARS-CoV-2","ATCACCCAAATAATAT",2,68.96,10.76,-0.07,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACCCCCGAGGTAA",7,99.86,6.48,-4.36,0.35,1.5,1.15,0.01,">1 nonsynonymous","Y35P T46L S113T F134M",4
"lib2","SARS-CoV-2","ATCACCCGATCAAAAA",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R L95R",2
"lib2","SARS-CoV-2","ATCACCCTCGGTGTCT",5,2.48,NA,NA,NA,NA,NA,NA,"stop","L57F Y91A L95* N107V S139I T148C",6
"lib2","SARS-CoV-2","ATCACCCTCTACAAAA",5,66.89,10.74,-0.09,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACCCTGGAATTAA",7,94.41,10.86,0.02,0.05,2.97,1.04,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","ATCACCCTGGACGCCA",14,84.54,6,-4.84,1.03,1.5,1.15,0.01,">1 nonsynonymous","V37N K132R P133T G146Y E154N Y175C",6
"lib2","SARS-CoV-2","ATCACCGAAATTAATG",5,1.06,NA,NA,NA,NA,NA,NA,"stop","C6* N13H G83L P96G V103N D112C Y123A",7
"lib2","SARS-CoV-2","ATCACCGATGACCACA",1,11.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41E C49G P82I W106I Y119F Q144C",6
"lib2","SARS-CoV-2","ATCACCGCTCCCTCGG",4,50.5,9.58,-1.26,0.08,1.96,1.04,0,">1 nonsynonymous","C6L K48R N58F",3
"lib2","SARS-CoV-2","ATCACCGGCACCTTGA",4,31.28,6.07,-4.77,1.03,1.5,1.16,0.02,">1 nonsynonymous","C61S G86Y V115H",3
"lib2","SARS-CoV-2","ATCACCGTAAAGTGCC",10,117.08,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","F12Y G51P N109W P149G",4
"lib2","SARS-CoV-2","ATCACCGTACTACATA",5,141.42,10.22,-0.62,0.03,2.89,1.06,0,">1 nonsynonymous","G116K N120I S200F",3
"lib2","SARS-CoV-2","ATCACCGTTACACTAT",3,91.67,9.78,-1.06,0.03,2.87,1.08,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","ATCACCGTTGAAGTAT",1,9.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I2V A33P L95P",3
"lib2","SARS-CoV-2","ATCACCTAAGATTGAT",3,1.28,NA,NA,NA,NA,NA,NA,"stop","K114* F156G",2
"lib2","SARS-CoV-2","ATCACCTAAGGTTGAA",2,17.79,6.59,-4.24,0.83,1.5,1.2,0.06,">1 nonsynonymous","R16N D90C F99S V115W Y143L C158N",6
"lib2","SARS-CoV-2","ATCACCTAATATTCTA",3,10.9,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C49N L131R P161N",3
"lib2","SARS-CoV-2","ATCACCTACCCTGCAA",13,204.73,9.89,-0.95,0.04,2.92,1.06,0,">1 nonsynonymous","N40T T85K E154L",3
"lib2","SARS-CoV-2","ATCACCTAGATCGAAG",12,171.15,10.08,-0.76,0.05,2.53,1.04,0,">1 nonsynonymous","Y35R D90N",2
"lib2","SARS-CoV-2","ATCACCTATAACAACT",7,87.9,10.66,-0.17,0.04,2.94,1.06,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","ATCACCTATTGCACTT",5,19.6,10.92,0.08,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACCTGATGAACCA",4,41.02,6,-4.84,2,3,1.12,0,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","ATCACCTTCTCTAGTC",1,29.23,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G9E F44H N58M G74K W106Q P149H",6
"lib2","SARS-CoV-2","ATCACGAAAAATCAGG",5,92.52,10.81,-0.03,0.05,2.97,1,0,"1 nonsynonymous","K132D",1
"lib2","SARS-CoV-2","ATCACGAAGATACCAA",5,48.33,7.85,-2.99,0.33,1.5,1.04,0.05,">1 nonsynonymous","S113R V173P",2
"lib2","SARS-CoV-2","ATCACGAAGATCTAGC",13,59.49,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19V G172D R179L",3
"lib2","SARS-CoV-2","ATCACGAGAATAGAAA",2,69.43,8.88,-1.95,0.06,2.77,1.04,0,">1 nonsynonymous","A14V G174C T201A",3
"lib2","SARS-CoV-2","ATCACGAGACTATCTA",3,13.08,8.78,-2.05,0.36,1.76,1.15,0.05,">1 nonsynonymous","N13T C61W T85S D90T",4
"lib2","SARS-CoV-2","ATCACGAGCCAGACAA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","V37E F47P D112* S147M V194L",5
"lib2","SARS-CoV-2","ATCACGATATACATGT",2,35.63,10.81,-0.03,0.07,2.92,1.04,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","ATCACGATCTTCTGAT",3,17.71,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","W23P T85I D98V",3
"lib2","SARS-CoV-2","ATCACGATGAAAAAGT",3,28.84,10.01,-0.82,0.13,2.18,1,0.01,">1 nonsynonymous","C61S W106R K128A",3
"lib2","SARS-CoV-2","ATCACGCAATGAATAA",22,14.1,NA,NA,NA,NA,NA,NA,"stop","N4K T55* E135C Y143F N151Y E154L Y175C",7
"lib2","SARS-CoV-2","ATCACGCATACAACAT",4,0.39,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","ATCACGCCACCCCACC",4,4.77,NA,NA,NA,NA,NA,NA,"stop","I2* T100H",2
"lib2","SARS-CoV-2","ATCACGCCCCAATTAC",3,39.92,10.89,0.05,0.1,2.9,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACGCGACTTAGGT",2,29.92,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","D97N N130D Q168R",3
"lib2","SARS-CoV-2","ATCACGGAAATTGACC",5,11.28,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P82F P149L G155S T201Y",4
"lib2","SARS-CoV-2","ATCACGGGAATGATAA",5,133.49,9.26,-1.57,0.06,2.91,1.06,0,">1 nonsynonymous","T100C L125Y",2
"lib2","SARS-CoV-2","ATCACGTAAAACTATT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V S45F R127T P177L",4
"lib2","SARS-CoV-2","ATCACGTAATGTAATA",1,22.3,8.93,-1.91,0.07,2.77,1.19,0,">1 nonsynonymous","K114I Q168L",2
"lib2","SARS-CoV-2","ATCACGTATGAGAGTA",4,104.77,10.85,0.01,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACGTGGTATAAAG",1,14.93,6,-4.84,2,1.5,1.13,0.04,"1 nonsynonymous","Y159S",1
"lib2","SARS-CoV-2","ATCACGTTGTCACTGA",5,13.98,9.69,-1.14,0.22,2.23,1.23,0.03,">1 nonsynonymous","D34P V115E F160N",3
"lib2","SARS-CoV-2","ATCACTAAATTGAGGA",7,20.82,9.55,-1.28,0.35,1.77,1,0.05,">1 nonsynonymous","C61P P96M",2
"lib2","SARS-CoV-2","ATCACTAAGAATTCTA",4,0.43,NA,NA,NA,NA,NA,NA,"stop","N1Q T15* A89Q D98V K132V",5
"lib2","SARS-CoV-2","ATCACTAAGGCAGACT",14,166.48,10.64,-0.19,0.03,2.88,1.12,0,">1 nonsynonymous","A22N P149T",2
"lib2","SARS-CoV-2","ATCACTAAGTTGATAA",11,25.8,6.19,-4.65,0.77,1.5,1.26,0.03,">1 nonsynonymous","P82W K114T L162T S200L",4
"lib2","SARS-CoV-2","ATCACTAATGAGACCG",3,45.58,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","S69T G101L R179G",3
"lib2","SARS-CoV-2","ATCACTACTAAACACC",11,166.56,10.12,-0.72,0.07,2.31,1.05,0,">1 nonsynonymous","D59R V65T Q163I",3
"lib2","SARS-CoV-2","ATCACTACTACATATG",4,28.6,7.84,-2.99,0.19,1.62,1.13,0.01,">1 nonsynonymous","C6W Y119T I138G",3
"lib2","SARS-CoV-2","ATCACTACTACGAAAC",1,0.11,NA,NA,NA,NA,NA,NA,"stop","I2K G9* L60* F99E F160T T201Q",6
"lib2","SARS-CoV-2","ATCACTACTTTCAAGA",2,6.15,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","F17M S41T D90P L122W F156N V181F",6
"lib2","SARS-CoV-2","ATCACTAGACATGTAA",7,62.28,9.2,-1.63,0.18,1.5,1.08,0.02,">1 nonsynonymous","Y91C F99Y",2
"lib2","SARS-CoV-2","ATCACTAGACCTCCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","W106N P133A G174*",3
"lib2","SARS-CoV-2","ATCACTAGATGTGGAA",5,52.31,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","Y35N T100I G174M L183Q",4
"lib2","SARS-CoV-2","ATCACTAGGAAAAGTA",8,154.89,6.61,-4.23,0.46,1.5,1.16,0.02,">1 nonsynonymous","F12Q D75L T201I",3
"lib2","SARS-CoV-2","ATCACTAGTAATACTT",1,56.01,10.57,-0.27,0.09,2.85,1.13,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","ATCACTATAGGTCCTG",7,0.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60E",1
"lib2","SARS-CoV-2","ATCACTATTTGCTCAT",12,80.78,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C61T L131D",2
"lib2","SARS-CoV-2","ATCACTCAACACCTAA",1,119.99,10.92,0.08,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCACTCAACGCCTGA",2,0.61,NA,NA,NA,NA,NA,NA,"stop","A22* S69V V115I",3
"lib2","SARS-CoV-2","ATCACTCAAGCCACGC",5,0.16,NA,NA,NA,NA,NA,NA,"stop","G86* Y119D K128R",3
"lib2","SARS-CoV-2","ATCACTCCAACCAACA",4,39.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48C I142R L162E",3
"lib2","SARS-CoV-2","ATCACTCCACGACCCA",1,6.89,10.91,0.07,0.1,3,1.02,0,"1 nonsynonymous","L188D",1
"lib2","SARS-CoV-2","ATCACTCCTAATGTAA",5,38.76,9.54,-1.3,0.13,2.78,1.08,0.01,">1 nonsynonymous","N120T Y143F T201S",3
"lib2","SARS-CoV-2","ATCACTCGATAAGATA",13,46.39,6.51,-4.32,0.25,1.65,1.08,0,">1 nonsynonymous","C61A V71Y L122M",3
"lib2","SARS-CoV-2","ATCACTCTCTCCTAAC",2,6.25,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F44P Q84N Y91N Y143I",4
"lib2","SARS-CoV-2","ATCACTGAAATATCGA",4,39.43,9.38,-1.45,0.18,1.73,1.08,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","ATCACTGAACTTCCCG",1,12.78,7.8,-3.04,0.32,1.5,1.18,0.04,">1 nonsynonymous","N40V L57W Q168T",3
"lib2","SARS-CoV-2","ATCACTGATCCTTGAA",1,3.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83Y",1
"lib2","SARS-CoV-2","ATCACTGGGAAAAAAG",5,165.11,10.7,-0.13,0.03,2.93,1.08,0,">1 nonsynonymous","T15K K26T",2
"lib2","SARS-CoV-2","ATCACTTAAACAAGTG",4,45.76,10.86,0.02,0.05,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCACTTAGTAGTTCA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","I104* G166T",2
"lib2","SARS-CoV-2","ATCACTTCACCATAAC",2,64.89,10.08,-0.75,0.04,2.93,1.06,0,"1 nonsynonymous","I142W",1
"lib2","SARS-CoV-2","ATCACTTCGTTGGCAA",17,297.18,10.8,-0.03,0.05,2.95,1.06,0,">1 nonsynonymous","I2M L162I",2
"lib2","SARS-CoV-2","ATCACTTGATCCGTGA",1,25.05,10.49,-0.35,0.09,2.87,1.13,0,">1 nonsynonymous","N4L T55R",2
"lib2","SARS-CoV-2","ATCACTTTAGCCACGT",23,4.73,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","ATCACTTTTCAATACA",8,166.52,10.91,0.07,0.05,2.92,1.09,0,"1 nonsynonymous","P7N",1
"lib2","SARS-CoV-2","ATCAGAAATCGATGTT",17,159.39,10.35,-0.48,0.04,2.89,1.13,0,">1 nonsynonymous","G9P C61S R78P K199M",4
"lib2","SARS-CoV-2","ATCAGAACACCGACTC",1,78.63,10.76,-0.07,0.04,2.89,1.12,0,">1 nonsynonymous","I2C V77L",2
"lib2","SARS-CoV-2","ATCAGAACATACATCT",7,50.68,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T15R S41P N64Q D75K G83V Y91S",6
"lib2","SARS-CoV-2","ATCAGAATAAACACTC",7,57.83,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","F8S F44T Y121V C150N Y165N",5
"lib2","SARS-CoV-2","ATCAGAATCTCTCTAA",3,20.6,6,-4.84,2,1.5,1.19,0.06,"1 nonsynonymous","R124P",1
"lib2","SARS-CoV-2","ATCAGAATTAAGTAAA",13,294.78,10.07,-0.77,0.05,2.34,1.02,0,">1 nonsynonymous","F62W A81H T85S D90S",4
"lib2","SARS-CoV-2","ATCAGAATTACAACTA",6,74.56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F156H F160S Q176F",3
"lib2","SARS-CoV-2","ATCAGAATTTTATGAT",11,97.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3L T15G E76Q G116S T148R G152Y Y175K",7
"lib2","SARS-CoV-2","ATCAGACAGAGAGAAG",3,60.95,9.48,-1.35,0.05,2.81,1.14,0,"1 nonsynonymous","G166C",1
"lib2","SARS-CoV-2","ATCAGACCCACAACTG",7,7.28,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","N13I K48V K132Y E141I C158G G166S",6
"lib2","SARS-CoV-2","ATCAGACTAAAGACAT",5,46.65,9.23,-1.61,0.1,1.69,1.06,0,">1 nonsynonymous","L38N D97G",2
"lib2","SARS-CoV-2","ATCAGACTATCTATCC",12,781.93,10.55,-0.28,0.02,2.95,1.02,0,">1 nonsynonymous","A42S D98N P149E",3
"lib2","SARS-CoV-2","ATCAGACTCTTACCCC",7,156.57,10.27,-0.57,0.03,2.85,1.03,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","ATCAGAGAAACGCGAC",15,161.32,10.19,-0.64,0.04,2.87,1.04,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","ATCAGAGAGATCGCAA",9,162.47,10.27,-0.57,0.03,2.96,1.04,0,">1 nonsynonymous","G116R Y175F",2
"lib2","SARS-CoV-2","ATCAGAGATAAGCCTC",2,30.79,10.51,-0.32,0.07,2.9,1.04,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","ATCAGAGATTAACTAC",3,27.73,10.33,-0.51,0.07,2.94,1.02,0.01,">1 nonsynonymous","G51S T148L",2
"lib2","SARS-CoV-2","ATCAGAGCAATGTAAA",1,6.65,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","Y119F R127P",2
"lib2","SARS-CoV-2","ATCAGAGCCAACCGAA",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A S19L V103K G172K",4
"lib2","SARS-CoV-2","ATCAGAGCCGATAACG",2,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V Y50K K94L",3
"lib2","SARS-CoV-2","ATCAGAGGGACAGCGG",3,26.31,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","Y93C N107L D112H V182R",4
"lib2","SARS-CoV-2","ATCAGAGTAAGCTTGT",5,19.95,6.06,-4.78,1.59,1.5,1.18,0.04,">1 nonsynonymous","C6R D98H D112L",3
"lib2","SARS-CoV-2","ATCAGAGTCCGATACA",3,1.89,NA,NA,NA,NA,NA,NA,"stop","K26W D34M L38*",3
"lib2","SARS-CoV-2","ATCAGATAGAAAAAAG",5,30.75,10.78,-0.06,0.04,2.92,1.08,0,">1 nonsynonymous","K48D T55K",2
"lib2","SARS-CoV-2","ATCAGATCACCCAGAC",3,74.98,8.5,-2.33,0.14,2.67,1.02,0.01,">1 nonsynonymous","K87V D98L F126T K132E P149T",5
"lib2","SARS-CoV-2","ATCAGATGCACACCCT",14,127.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8N S108Y Y175A",3
"lib2","SARS-CoV-2","ATCAGATGCTTTTTCA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A N64G D98R",3
"lib2","SARS-CoV-2","ATCAGATGTGGCCACA",5,128.16,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","K56F Y121K N171P Q176V",4
"lib2","SARS-CoV-2","ATCAGATTATCAAATC",4,16.68,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","Y35D Q84L D90F",3
"lib2","SARS-CoV-2","ATCAGATTTACCACAC",6,26,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F12H C150T V173F V182F L188V",5
"lib2","SARS-CoV-2","ATCAGCAAAGCCCTAT",11,70.88,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N92F Y143H P169H K198C",4
"lib2","SARS-CoV-2","ATCAGCAAGAAATCAG",6,74.99,10.73,-0.11,0.04,3,1,0,">1 nonsynonymous","Y35L L131M T201P",3
"lib2","SARS-CoV-2","ATCAGCAATGCACCCA",4,200.89,10.78,-0.05,0.04,2.93,1.09,0,"1 nonsynonymous","Q144E",1
"lib2","SARS-CoV-2","ATCAGCACACGAATAA",7,35.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F12G F134V N157Q",3
"lib2","SARS-CoV-2","ATCAGCACAGTCCATA",2,16.88,8.69,-2.14,0.6,1.5,1,0.07,"1 nonsynonymous","D137P",1
"lib2","SARS-CoV-2","ATCAGCACTGCAACTA",10,67.84,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","Y66A N157P",2
"lib2","SARS-CoV-2","ATCAGCAGACGCTTGA",6,30.04,6.65,-4.18,0.49,1.5,1.07,0.03,">1 nonsynonymous","Y50S P133H",2
"lib2","SARS-CoV-2","ATCAGCAGTACAGATA",4,59.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10R R124C N130T Y165Q",4
"lib2","SARS-CoV-2","ATCAGCATAAAGGCCC",1,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V E135R",2
"lib2","SARS-CoV-2","ATCAGCATATCTTGTG",2,5.23,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","N40G Y50K P96H W106L S129F G146R",6
"lib2","SARS-CoV-2","ATCAGCATCACATAGG",12,96.71,6.06,-4.77,0.67,1.5,1.18,0.01,">1 nonsynonymous","G101S G117H Y175V T201N",4
"lib2","SARS-CoV-2","ATCAGCCAACTACGGA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y K94V R127P V173I",4
"lib2","SARS-CoV-2","ATCAGCCCTTCCACTA",5,124.37,10.63,-0.21,0.03,2.87,1.12,0,">1 nonsynonymous","S45T T148V",2
"lib2","SARS-CoV-2","ATCAGCCGCCGGCTCC",18,333.19,10.26,-0.58,0.02,2.87,1.05,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","ATCAGCCTATCGGTTG",6,80.31,8.66,-2.17,0.09,2.78,1.08,0,">1 nonsynonymous","L38I G117L G174S",3
"lib2","SARS-CoV-2","ATCAGCCTTCCACAAT",11,217.17,10.57,-0.27,0.04,2.95,1.05,0,">1 nonsynonymous","G9I S147T",2
"lib2","SARS-CoV-2","ATCAGCGAGCGAGAAC",6,166.85,8.38,-2.45,0.16,2.59,1.18,0.01,">1 nonsynonymous","Y175R T201S",2
"lib2","SARS-CoV-2","ATCAGCGGGGGGGATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21V T63F P96L",3
"lib2","SARS-CoV-2","ATCAGCGGTATACCAC",3,2.91,NA,NA,NA,NA,NA,NA,"stop","Y66T V77L W106R F126C D137K C158K Y165*",7
"lib2","SARS-CoV-2","ATCAGCGTAAAGACCG",3,22.13,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Y35S R124Q",2
"lib2","SARS-CoV-2","ATCAGCGTCGGCCGAT",5,33.19,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V37D L131K",2
"lib2","SARS-CoV-2","ATCAGCTAAAAATGTA",4,96.8,10.03,-0.8,0.06,2.32,1.02,0,">1 nonsynonymous","G9Y P54Y Q144W",3
"lib2","SARS-CoV-2","ATCAGCTAAAGTCACA",2,0.54,NA,NA,NA,NA,NA,NA,"stop","V52I T100N L111* T170V K198F",5
"lib2","SARS-CoV-2","ATCAGCTAGACCACCA",1,11.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49L K94I",2
"lib2","SARS-CoV-2","ATCAGCTATAATATGG",3,66.26,11.02,0.19,0.06,2.87,1.15,0,">1 nonsynonymous","A33Q T55H T100M N171Y",4
"lib2","SARS-CoV-2","ATCAGCTCCCGAAAGT",10,88.7,9.28,-1.56,0.07,1.83,1.05,0,">1 nonsynonymous","F12S V37G",2
"lib2","SARS-CoV-2","ATCAGCTCGCCACTCG",6,64.51,10.87,0.04,0.05,2.89,1.12,0,"1 nonsynonymous","I28W",1
"lib2","SARS-CoV-2","ATCAGCTGAACCCGAC",6,60.07,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","E10D R16I G101R N120D",4
"lib2","SARS-CoV-2","ATCAGGAACAAAGACC",6,19.53,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6I G74L S147K Q176T",4
"lib2","SARS-CoV-2","ATCAGGAATGGGCACT",2,42.24,10.65,-0.18,0.04,2.86,1.16,0,"1 nonsynonymous","Y50W",1
"lib2","SARS-CoV-2","ATCAGGACGTATCCTT",3,9.12,6.35,-4.49,0.94,1.5,1.17,0.06,">1 nonsynonymous","F8C F12E F44D",3
"lib2","SARS-CoV-2","ATCAGGATAACTAGAA",9,35.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Q84P L95V Y143R N157D",4
"lib2","SARS-CoV-2","ATCAGGATCTAAAGTA",4,73.53,10.93,0.09,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAGGATTTCGATAC",1,39.11,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","D98S R127Q Y175T",3
"lib2","SARS-CoV-2","ATCAGGCCACTCTTGT",6,60.71,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G51P C150S",2
"lib2","SARS-CoV-2","ATCAGGGATAAAAAAT",5,52.81,10.81,-0.03,0.04,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAGGTAGACTTGCA",1,9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5T Y35R D90G S108G",4
"lib2","SARS-CoV-2","ATCAGGTCTACATCAG",6,70.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14T L38Q N157H",3
"lib2","SARS-CoV-2","ATCAGGTGAAATCTAA",4,40.7,10.63,-0.21,0.05,2.9,1.09,0,"1 nonsynonymous","K132I",1
"lib2","SARS-CoV-2","ATCAGGTGAAGGAACT",1,27.08,10.57,-0.26,0.05,2.99,1,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","ATCAGGTGGAGAACTC",1,13.25,9.42,-1.41,0.13,2.51,1.02,0.01,">1 nonsynonymous","S36R K56Q G117Y K132R S164F",5
"lib2","SARS-CoV-2","ATCAGGTGTTACCTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38H K87E",2
"lib2","SARS-CoV-2","ATCAGTAAAGAAAACT",8,159.53,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","W23S P82D R124L",3
"lib2","SARS-CoV-2","ATCAGTAACGATAAAT",2,70.31,10.05,-0.78,0.11,2.42,1.05,0.01,">1 nonsynonymous","F44E D90R",2
"lib2","SARS-CoV-2","ATCAGTAAGATTACTC",5,11.46,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D34S F44H L60D T85A E141F",5
"lib2","SARS-CoV-2","ATCAGTACACGAGCAA",3,16.96,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","Y66N N107C Y165S",3
"lib2","SARS-CoV-2","ATCAGTACGAATGGCT",3,0,NA,NA,NA,NA,NA,NA,"stop","A14C F44T D98* A105S Y165* T201G",6
"lib2","SARS-CoV-2","ATCAGTCACTAAATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","L162T V181* A190I",3
"lib2","SARS-CoV-2","ATCAGTCATTAGTTAA",1,7.9,9.74,-1.09,0.23,2.08,1.01,0.02,">1 nonsynonymous","N107P K128F Y178Q",3
"lib2","SARS-CoV-2","ATCAGTCGAGTGAATT",10,62.96,6,-4.84,1.36,1.5,1.13,0,">1 nonsynonymous","K94F N157S T201D",3
"lib2","SARS-CoV-2","ATCAGTCTAGGCGAAG",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S I88M F156M",3
"lib2","SARS-CoV-2","ATCAGTGACCACTATG",1,91.2,6.71,-4.13,0.34,1.5,1.18,0.01,">1 nonsynonymous","N40H N151D Y159R K198R",4
"lib2","SARS-CoV-2","ATCAGTGAGCACATAA",4,32.97,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F8K I88Y E141M",3
"lib2","SARS-CoV-2","ATCAGTGAGTATGAAA",3,42.28,10.83,0,0.07,3,1.02,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","ATCAGTGCTGAGCAAT",3,83.27,10.83,0,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCAGTGGCTAGGAAA",1,22.77,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F17W L57K I80T",3
"lib2","SARS-CoV-2","ATCAGTGTCTCAGGAA",3,26.56,8.86,-1.97,0.17,1.73,1.02,0.02,">1 nonsynonymous","A42Q R127D",2
"lib2","SARS-CoV-2","ATCAGTGTTTAACAGT",1,25.41,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10M A67S G83W F99C R136N E186Y",6
"lib2","SARS-CoV-2","ATCAGTTAAAGCAGTG",1,30.68,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49G D97A F160G Q176V",4
"lib2","SARS-CoV-2","ATCAGTTAACGAGACG",10,88.54,10.05,-0.79,0.08,2.39,1.06,0,"1 nonsynonymous","L38A",1
"lib2","SARS-CoV-2","ATCAGTTAATAACGAA",3,59.99,10.04,-0.79,0.1,2.37,1.05,0.01,">1 nonsynonymous","W106S S164P",2
"lib2","SARS-CoV-2","ATCAGTTAATCTGAGT",2,18.43,6,-4.84,2,3,1.18,0,">1 nonsynonymous","R25V R73A",2
"lib2","SARS-CoV-2","ATCAGTTAGGCCTATG",3,17.77,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T3S V71S Y121N",3
"lib2","SARS-CoV-2","ATCAGTTCGCGCCTTT",1,61.37,10.63,-0.21,0.03,2.95,1.07,0,">1 nonsynonymous","S29A V37L Y121F",3
"lib2","SARS-CoV-2","ATCAGTTTAGTCGGGG",4,73.75,8.67,-2.17,0.12,2.36,1.11,0.01,">1 nonsynonymous","D90F N118K",2
"lib2","SARS-CoV-2","ATCAGTTTTGTGACAA",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S T100P V115R",3
"lib2","SARS-CoV-2","ATCATAAAAACGTTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","A33D P54S C61R D90* N109V C150D G174V",7
"lib2","SARS-CoV-2","ATCATAAAACGAATGC",2,0.87,NA,NA,NA,NA,NA,NA,"stop","S36G R136E I142* G174F",4
"lib2","SARS-CoV-2","ATCATAAAACGGTCTT",4,7.75,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","E10Q Y50L A89R",3
"lib2","SARS-CoV-2","ATCATAAAATCGTAGT",2,37.66,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6S E10D C61F P149F G155C",5
"lib2","SARS-CoV-2","ATCATAAACTTTATGA",4,53.52,10.86,0.02,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATAAAGGACGTTA",18,134.3,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C61A S113N R124V S139R",4
"lib2","SARS-CoV-2","ATCATAAAGTCTTTAA",6,77.42,10.75,-0.09,0.04,3,1.02,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","ATCATAAATAGGTATA",13,192.72,9.77,-1.06,0.08,2.37,1.05,0,">1 nonsynonymous","S41M D59A Y178I",3
"lib2","SARS-CoV-2","ATCATAAATTCCCGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10G D68G C102* N107S E141S",5
"lib2","SARS-CoV-2","ATCATAACAGTAGATT",2,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L D90F",2
"lib2","SARS-CoV-2","ATCATAACATATTAAC",3,43.97,10.03,-0.81,0.1,2.74,1.05,0,"1 nonsynonymous","F17V",1
"lib2","SARS-CoV-2","ATCATAAGAAATCCGT",5,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V A105R Q144S",3
"lib2","SARS-CoV-2","ATCATAAGAAGAGTAT",6,54.56,8.11,-2.72,0.17,2.1,1.1,0.01,">1 nonsynonymous","N107V K114A F156Y",3
"lib2","SARS-CoV-2","ATCATAAGACCAACTT",5,121.95,10.79,-0.05,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATAAGATGTAGAA",1,21.13,7.56,-3.28,0.39,1.5,1.22,0.04,">1 nonsynonymous","A89F I138G V173R",3
"lib2","SARS-CoV-2","ATCATAATAAAGGGCC",2,10.9,7.08,-3.75,0.5,1.5,1,0.06,">1 nonsynonymous","K87A G146V Y165M",3
"lib2","SARS-CoV-2","ATCATAATACCAAATA",5,29,8.79,-2.04,0.19,1.5,1.07,0.02,">1 nonsynonymous","N4E F185N",2
"lib2","SARS-CoV-2","ATCATAATAGAAAAAG",6,51.42,10.08,-0.75,0.07,2.71,1.04,0,">1 nonsynonymous","T100L K128V Q144N F160L K198C",5
"lib2","SARS-CoV-2","ATCATAATCAACACGT",5,19.36,7.63,-3.21,0.26,1.5,1.12,0.02,">1 nonsynonymous","S45L L131A",2
"lib2","SARS-CoV-2","ATCATAATGTAGTAAG",2,9.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T63R D90H S108R E141V",4
"lib2","SARS-CoV-2","ATCATAATTACGTCCC",3,33.98,9.57,-1.27,0.08,2.77,1.07,0,">1 nonsynonymous","N118I S184T",2
"lib2","SARS-CoV-2","ATCATACAAAAATGCT",2,35.21,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","E10K D68W I88H",3
"lib2","SARS-CoV-2","ATCATACACCCCATTG",13,96.56,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8N I104F A145D",3
"lib2","SARS-CoV-2","ATCATACACGTACCAA",13,196.67,10.51,-0.33,0.05,2.82,1.09,0,">1 nonsynonymous","D97R Y143H",2
"lib2","SARS-CoV-2","ATCATACAGAATGAGT",6,110.99,10.54,-0.29,0.02,2.99,1.02,0,">1 nonsynonymous","V32L F160L",2
"lib2","SARS-CoV-2","ATCATACATATTACAG",20,169.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26P L60R L122T K198P",4
"lib2","SARS-CoV-2","ATCATACATGCTTATA",5,79.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83F I138G A145Y Y175M",4
"lib2","SARS-CoV-2","ATCATACCCTCCTAAC",7,6,10.46,-0.37,0.2,2.97,1.13,0.01,">1 nonsynonymous","A22G V153A",2
"lib2","SARS-CoV-2","ATCATACCGATTACCG",5,49.83,10.23,-0.6,0.05,2.83,1.15,0,">1 nonsynonymous","A105S V173D P191F",3
"lib2","SARS-CoV-2","ATCATACCGGGCCTAA",11,197.39,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T3S K94T D112T",3
"lib2","SARS-CoV-2","ATCATACGAACGGTAA",5,60.65,7.81,-3.03,0.31,1.5,1.04,0.04,">1 nonsynonymous","S41C F99C",2
"lib2","SARS-CoV-2","ATCATACTAGGCTAAG",8,16.19,9.72,-1.12,0.11,1.9,1.03,0.01,">1 nonsynonymous","S36Y N107A K132H",3
"lib2","SARS-CoV-2","ATCATACTAGTTGAAT",2,45.58,9.53,-1.31,0.06,2.81,1.06,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","ATCATACTGAACGCGA",1,12.62,10.43,-0.4,0.1,2.8,1.09,0.01,">1 nonsynonymous","A33R C61A",2
"lib2","SARS-CoV-2","ATCATACTTGAGATTT",7,30.15,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","L125S G152I Y165E",3
"lib2","SARS-CoV-2","ATCATAGAAAACTCAG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11M N64K D90S K114A S129N L162M T201N",7
"lib2","SARS-CoV-2","ATCATAGACAATAGCA",1,96.59,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9R D97L N118Y N151Q P177D",5
"lib2","SARS-CoV-2","ATCATAGAGACATTTT",1,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K T201M",2
"lib2","SARS-CoV-2","ATCATAGATTTCGGAT",2,1.68,NA,NA,NA,NA,NA,NA,"stop","A14I L38* D98P",3
"lib2","SARS-CoV-2","ATCATAGCTACAAAAC",5,53.72,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K56F N107I K128P",3
"lib2","SARS-CoV-2","ATCATAGGCGACTCCA",1,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K N120F",2
"lib2","SARS-CoV-2","ATCATAGGTCCATAGC",7,78.92,6.14,-4.7,1,1.5,1.15,0.03,">1 nonsynonymous","F44I Y91F F99L P133H",4
"lib2","SARS-CoV-2","ATCATAGTAGACAATC",3,66.99,9.77,-1.07,0.1,2.34,1.01,0,">1 nonsynonymous","F47H C61W",2
"lib2","SARS-CoV-2","ATCATAGTATAACCAA",4,94.72,10.82,-0.02,0.03,2.99,1.02,0,"1 nonsynonymous","I138T",1
"lib2","SARS-CoV-2","ATCATATAAAATATAT",2,54.64,10.12,-0.71,0.06,2.49,1.03,0,"1 nonsynonymous","C102V",1
"lib2","SARS-CoV-2","ATCATATAAAGCCTTT",4,33.6,10.82,-0.02,0.1,2.76,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATATAATGAAAAT",10,149.85,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S41R A67N",2
"lib2","SARS-CoV-2","ATCATATAATTCATCG",6,47.21,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S113W S139V N151L",3
"lib2","SARS-CoV-2","ATCATATAATTGATAT",2,34.62,10.86,0.02,0.05,2.99,1.03,0,">1 nonsynonymous","T55R K128R",2
"lib2","SARS-CoV-2","ATCATATAGAAAAAAT",1,77.98,10.21,-0.62,0.04,2.99,1.06,0,">1 nonsynonymous","L5H K87C K132L",3
"lib2","SARS-CoV-2","ATCATATATACGCATT",1,55.37,9.67,-1.16,0.05,2.03,1.06,0,">1 nonsynonymous","F44I A105C",2
"lib2","SARS-CoV-2","ATCATATATCCACGTA",2,50.05,10.88,0.04,0.08,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATATCCATCCTCT",1,12.96,10.84,0,0.12,2.85,1.14,0.01,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","ATCATATCCCCATGAC",5,136.59,9.88,-0.96,0.07,2.6,1.05,0,">1 nonsynonymous","A42V L57F G152T",3
"lib2","SARS-CoV-2","ATCATATCCTCCCATG",20,397.11,10.96,0.12,0.05,2.93,1.07,0,">1 nonsynonymous","V37N P197V T201L",3
"lib2","SARS-CoV-2","ATCATATCGACTTACG",3,18.34,7.76,-3.07,0.42,1.5,1,0.04,">1 nonsynonymous","V71S S139G",2
"lib2","SARS-CoV-2","ATCATATCGTGAGGAC",10,34.64,10.92,0.09,0.06,2.96,1.05,0,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","ATCATATCTCGAACAA",5,30.27,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F17A C31Y F99T N120V",4
"lib2","SARS-CoV-2","ATCATATGAACAGTCA",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86T C102G N157R",3
"lib2","SARS-CoV-2","ATCATATGAACTAATA",10,393.9,10.28,-0.55,0.02,2.89,1.04,0,">1 nonsynonymous","F44I D97S G152D",3
"lib2","SARS-CoV-2","ATCATATGTCGTGTCT",7,27.73,10.74,-0.09,0.06,3,1.06,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","ATCATATGTGTCCGAT",8,103.68,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C158M Q168K",2
"lib2","SARS-CoV-2","ATCATATTTATGAATC",4,18.7,10.85,0.02,0.05,3,1.01,0,">1 nonsynonymous","N58H F160Y P197T",3
"lib2","SARS-CoV-2","ATCATATTTATTCCTG",12,210.43,10.22,-0.62,0.02,2.92,1.04,0,"1 nonsynonymous","C31F",1
"lib2","SARS-CoV-2","ATCATCAAAAAACTCA",2,10.97,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T63Q D112W",2
"lib2","SARS-CoV-2","ATCATCAAAATGTGCA",5,117.35,9.84,-1,0.08,2.35,1.02,0,">1 nonsynonymous","A14V A33R P54H",3
"lib2","SARS-CoV-2","ATCATCAAGATTTACC",2,43.9,9.97,-0.87,0.15,1.95,1.01,0.01,">1 nonsynonymous","R16L A42L S139F",3
"lib2","SARS-CoV-2","ATCATCAAGGACATGG",7,67.47,10.4,-0.43,0.03,2.99,1.04,0,">1 nonsynonymous","P149R P169R",2
"lib2","SARS-CoV-2","ATCATCAATAGGGAAA",7,37.03,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y21S C61W K94L Y119L Q163V",5
"lib2","SARS-CoV-2","ATCATCAATGTCCATG",5,33.72,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V71L P96S V173T",3
"lib2","SARS-CoV-2","ATCATCACACTCACCC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V L57I Y93A",3
"lib2","SARS-CoV-2","ATCATCACCACTGCAT",3,33.2,9.69,-1.14,0.08,2.03,1.04,0,">1 nonsynonymous","F17Q P149N P197R",3
"lib2","SARS-CoV-2","ATCATCACCGGTTAAG",8,63.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D90T I104R N157Y",3
"lib2","SARS-CoV-2","ATCATCAGACAATCGG",1,1.72,NA,NA,NA,NA,NA,NA,"stop","Y50H D59*",2
"lib2","SARS-CoV-2","ATCATCAGCGACCGAC",4,16.86,8.81,-2.02,0.18,1.87,1.15,0.03,">1 nonsynonymous","A14N S43L Y121R",3
"lib2","SARS-CoV-2","ATCATCAGCTGTACGA",1,19.55,10.77,-0.07,0.08,2.83,1.09,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","ATCATCAGTATTATAC",2,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S A105P",2
"lib2","SARS-CoV-2","ATCATCAGTCTGTTAC",1,23.42,10.88,0.04,0.09,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATCATAACGCAGT",3,38.52,9.19,-1.65,0.06,2.93,1.11,0,">1 nonsynonymous","G117E F160N",2
"lib2","SARS-CoV-2","ATCATCATGTTTAAGG",6,103.51,10.27,-0.57,0.03,2.98,1.05,0,">1 nonsynonymous","F44I P54E K87L",3
"lib2","SARS-CoV-2","ATCATCATTCACTTCT",2,26.28,9.12,-1.72,0.16,2.89,1.03,0.02,">1 nonsynonymous","I2L T85P Y119Q",3
"lib2","SARS-CoV-2","ATCATCCAAACTTAAG",1,4.09,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATCATCCACAAAATCG",7,95.59,8.65,-2.19,0.08,2.92,1.08,0,">1 nonsynonymous","G9Q N157E K198R",3
"lib2","SARS-CoV-2","ATCATCCATTTCATAG",17,50.92,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","W106K L122M C158M",3
"lib2","SARS-CoV-2","ATCATCCCAATACGAT",3,4.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","ATCATCCCATTTACTT",3,98.56,9.24,-1.59,0.08,2.83,1.06,0,">1 nonsynonymous","C6V C61N D97G L125Q",4
"lib2","SARS-CoV-2","ATCATCCCCAAAATGA",6,4.03,NA,NA,NA,NA,NA,NA,"stop","T3L V11A N92S R136*",4
"lib2","SARS-CoV-2","ATCATCCCCTTCAACT",2,32.98,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50V Y93F S129G",3
"lib2","SARS-CoV-2","ATCATCCGATACACAT",2,1.54,NA,NA,NA,NA,NA,NA,"stop","T3L Y35* S45P T100D N107K",5
"lib2","SARS-CoV-2","ATCATCCGTCCTGCAA",8,31.7,6,-4.84,2,3,1.18,0.05,">1 nonsynonymous","T100L S108R E141F",3
"lib2","SARS-CoV-2","ATCATCCTGCGTACCT",13,127.95,7.48,-3.35,0.47,1.5,1.12,0.06,">1 nonsynonymous","A14R Y50M P169H",3
"lib2","SARS-CoV-2","ATCATCGAACACTCAA",2,16.62,9.31,-1.53,0.36,1.88,1.04,0.08,">1 nonsynonymous","C31R R73M G152T",3
"lib2","SARS-CoV-2","ATCATCGAAGCCTGTA",8,142.49,8.98,-1.86,0.06,1.93,1.04,0,">1 nonsynonymous","E10S V37K N107V",3
"lib2","SARS-CoV-2","ATCATCGAATAGAGAT",7,73.65,10.8,-0.03,0.06,2.76,1.2,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","ATCATCGAGAAGCAAT",1,25.72,10.77,-0.07,0.1,2.97,1.05,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","ATCATCGCCGTCCGCA",4,6.23,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","P149R Y159S S184L",3
"lib2","SARS-CoV-2","ATCATCTAAGAAACCG",3,22.85,10.72,-0.12,0.05,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATCTATTAAAGAT",5,35.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D P82M",2
"lib2","SARS-CoV-2","ATCATCTCGATACTGG",4,34.38,10.78,-0.06,0.06,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATCTGATAACGAA",2,61.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N118E Q144S R179A",3
"lib2","SARS-CoV-2","ATCATCTTTTATACTA",2,34.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I88F K132T I138C",3
"lib2","SARS-CoV-2","ATCATGACTATTTAAC",1,20.73,10.44,-0.4,0.08,3,1.05,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","ATCATGACTTAGTATC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N30R Y39* S113P K198L",4
"lib2","SARS-CoV-2","ATCATGAGAAAACCCT",4,66.31,8.02,-2.81,0.16,1.74,1.1,0.01,">1 nonsynonymous","S53E R136W Y175R",3
"lib2","SARS-CoV-2","ATCATGAGCAACCATT",1,6.91,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","T15K S43Y D90Y R124I G155S",5
"lib2","SARS-CoV-2","ATCATGAGTAAAGCTA",12,181.57,10.81,-0.02,0.04,2.94,1.06,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","ATCATGAGTGTGGCAG",2,16.59,6,-4.84,2,3,1.05,0,">1 nonsynonymous","P82T N157M",2
"lib2","SARS-CoV-2","ATCATGCAAAAACTCT",14,264.16,10.65,-0.19,0.03,2.95,1.05,0,"1 nonsynonymous","R27W",1
"lib2","SARS-CoV-2","ATCATGCCATGACTCA",9,62.71,6.52,-4.31,0.21,1.5,1.15,0,">1 nonsynonymous","C102S R127H K198M",3
"lib2","SARS-CoV-2","ATCATGCGAAGACCTA",4,179.64,10.67,-0.17,0.03,2.97,1.04,0,"1 nonsynonymous","T3C",1
"lib2","SARS-CoV-2","ATCATGGATACTAAAA",9,90.56,10.8,-0.03,0.04,2.89,1.13,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","ATCATGGTCCCACTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34E Y123L P149Q Q168*",4
"lib2","SARS-CoV-2","ATCATGGTTACTAACA",3,56.13,10.87,0.03,0.07,2.99,1.03,0,"1 nonsynonymous","E141D",1
"lib2","SARS-CoV-2","ATCATGGTTCAACCCA",12,14.91,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3M G74T G83L K94L D112M",5
"lib2","SARS-CoV-2","ATCATGTAAAAATAAC",9,19.2,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","S41I A81S Y93Q P149V N157G",5
"lib2","SARS-CoV-2","ATCATGTAACAAAAAC",7,35.3,6,-4.84,2,1.5,1.28,0.01,">1 nonsynonymous","G101S I104Q P161E",3
"lib2","SARS-CoV-2","ATCATGTCTAGCATAA",8,80.84,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38P F47N D137Q",3
"lib2","SARS-CoV-2","ATCATGTGCAGGTCAC",8,208.11,10.82,-0.02,0.03,2.95,1.06,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","ATCATGTGTAAATGGT",4,66.63,10.25,-0.58,0.07,2.74,1.01,0,">1 nonsynonymous","N107S T140Q",2
"lib2","SARS-CoV-2","ATCATTAAAAGTTATG",1,13.6,9.82,-1.02,0.12,2.5,1.12,0.01,">1 nonsynonymous","R16E D98A F134L N151T",4
"lib2","SARS-CoV-2","ATCATTAACAGCCTAG",5,39.88,6,-4.84,2,1.5,1.24,0.04,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","ATCATTAAGACCGAAA",2,43.33,10.83,-0.01,0.04,2.96,1.06,0,"1 nonsynonymous","Q163S",1
"lib2","SARS-CoV-2","ATCATTAAGCAAATAG",10,191.36,10.58,-0.25,0.02,2.92,1.04,0,">1 nonsynonymous","Y178V T201W",2
"lib2","SARS-CoV-2","ATCATTAAGTTCCCCT",3,42.36,10.38,-0.46,0.11,2.49,1.04,0,">1 nonsynonymous","V11I C61Y D90K",3
"lib2","SARS-CoV-2","ATCATTAATCTCCCAA",14,243.71,10.32,-0.52,0.05,2.8,1.07,0,">1 nonsynonymous","K26L A42V T63Y",3
"lib2","SARS-CoV-2","ATCATTACAAATATCA",2,13.3,9.02,-1.82,0.11,2.91,1.05,0.01,">1 nonsynonymous","D98A F126Y S184H",3
"lib2","SARS-CoV-2","ATCATTACACCCTGTG",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V D68K G86P N107W K114W",5
"lib2","SARS-CoV-2","ATCATTACCAGCGGCA",3,58.89,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N4V S36R S45Y D59M I88G",5
"lib2","SARS-CoV-2","ATCATTACTGAGAAAA",3,30.03,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S69K N120C G146I Y165K G174D",5
"lib2","SARS-CoV-2","ATCATTACTTCATATG",18,152.5,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P7T A14D S113R P149L Q176P",5
"lib2","SARS-CoV-2","ATCATTAGACCTACCA",3,2.53,NA,NA,NA,NA,NA,NA,"stop","L57* A89S F167E",3
"lib2","SARS-CoV-2","ATCATTAGAGTTACAA",23,90.72,6,-4.84,1.29,1.5,1.15,0.01,">1 nonsynonymous","A22H C102W W106S T201L",4
"lib2","SARS-CoV-2","ATCATTAGTGCGGTCA",2,37.82,10.3,-0.54,0.06,2.88,1.07,0,">1 nonsynonymous","K26M Y35R N58S L122K K132L",5
"lib2","SARS-CoV-2","ATCATTATAACGGTTA",13,101.03,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N107S R124K G146A P169F P197K",5
"lib2","SARS-CoV-2","ATCATTATACAAACGA",1,5.5,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V115H C150Y",2
"lib2","SARS-CoV-2","ATCATTATAGTTTATC",2,40.37,10.81,-0.03,0.05,2.95,1.07,0,"1 nonsynonymous","I2Q",1
"lib2","SARS-CoV-2","ATCATTATCTACGATA",2,62.96,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N4W S29M A42F G51L D59K Y66C N92A N107H G174M",9
"lib2","SARS-CoV-2","ATCATTCAACTGACAG",3,28.95,9.48,-1.36,0.06,2.91,1.08,0,">1 nonsynonymous","V37T Y119H",2
"lib2","SARS-CoV-2","ATCATTCAAGGAAAAA",1,45.92,8.31,-2.52,0.14,2.86,1.12,0.01,">1 nonsynonymous","V37S F44V G174I",3
"lib2","SARS-CoV-2","ATCATTCACACCCACC",3,76.46,10.77,-0.06,0.03,2.99,1.04,0,">1 nonsynonymous","V37R T63G",2
"lib2","SARS-CoV-2","ATCATTCCCATCTCTA",3,14.81,9.03,-1.8,0.15,1.81,1.07,0.02,">1 nonsynonymous","A81E A89M",2
"lib2","SARS-CoV-2","ATCATTCCTAAATCAG",4,47.88,10.74,-0.09,0.06,2.88,1.13,0,">1 nonsynonymous","N4S N58K",2
"lib2","SARS-CoV-2","ATCATTCCTAGCAATT",1,8.56,6.55,-4.29,0.27,2.24,1.17,0.01,">1 nonsynonymous","F70A L95D V103G",3
"lib2","SARS-CoV-2","ATCATTCCTGAATTCG",4,10.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H T15S C61Y I88G Y119V",5
"lib2","SARS-CoV-2","ATCATTCGACGGGTTA",6,118.78,10.85,0.01,0.04,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCATTCTCTACGAAT",7,93.88,10.71,-0.12,0.03,2.97,1.04,0,"1 nonsynonymous","E186S",1
"lib2","SARS-CoV-2","ATCATTCTTGCCCAAT",1,6.46,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","A42T Y50R W106M R136S",4
"lib2","SARS-CoV-2","ATCATTCTTTTCGACT",7,7.15,NA,NA,NA,NA,NA,NA,"stop","L5P E10* S45A V103I G155L",5
"lib2","SARS-CoV-2","ATCATTGAATACAGCG",3,66.84,10.63,-0.21,0.05,2.99,1.01,0,">1 nonsynonymous","N64V P96S",2
"lib2","SARS-CoV-2","ATCATTGAGTCAAACT",3,89.15,10.88,0.05,0.06,2.98,1.05,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","ATCATTGCAAACGGAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","Y159* P197F",2
"lib2","SARS-CoV-2","ATCATTGGAACAAATA",6,88.37,10.81,-0.03,0.05,2.92,1.07,0,"1 nonsynonymous","T3M",1
"lib2","SARS-CoV-2","ATCATTGGCTCTAAGT",2,17.19,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","F8L P82L A105D",3
"lib2","SARS-CoV-2","ATCATTGGGTATAATG",6,6.97,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","N58S G74K F99N",3
"lib2","SARS-CoV-2","ATCATTGTGATCCTTC",22,140.2,6.94,-3.9,0.36,1.5,1.15,0.02,">1 nonsynonymous","E76Y N151I",2
"lib2","SARS-CoV-2","ATCATTTACTCGCACG",7,133.78,10.52,-0.31,0.03,2.84,1.1,0,">1 nonsynonymous","D98F V115K",2
"lib2","SARS-CoV-2","ATCATTTATACAAAAT",8,29.95,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A14F S45Y P96D C150K G155A",5
"lib2","SARS-CoV-2","ATCATTTATGTCAGGT",4,59.47,10.82,-0.01,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATTTATTCATCTC",4,21.04,10.78,-0.06,0.06,2.87,1.14,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","ATCATTTCAATTAGTT",2,5.67,7.54,-3.29,0.45,1.5,1,0.06,">1 nonsynonymous","G83F P96W",2
"lib2","SARS-CoV-2","ATCATTTCGCTTACTT",2,6.72,9.45,-1.38,0.26,2.39,1.04,0.01,">1 nonsynonymous","Q84K L95V G155C",3
"lib2","SARS-CoV-2","ATCATTTCTAAATTGT",2,27.24,10.84,0.01,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATTTGCCCAAACA",6,284.24,10.85,0.02,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCATTTTAATTTCGA",6,75.73,10.6,-0.23,0.06,2.81,1.13,0,">1 nonsynonymous","L5P V37N C61I T100H S129T",5
"lib2","SARS-CoV-2","ATCATTTTGTATTAAG",3,23.46,10.62,-0.22,0.07,2.92,1.07,0,"1 nonsynonymous","F156P",1
"lib2","SARS-CoV-2","ATCATTTTTACCAAAT",2,22.91,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P7V T63L R136N I142C",4
"lib2","SARS-CoV-2","ATCCAAAAAAGACACT",7,4.13,NA,NA,NA,NA,NA,NA,"stop","R16I I104* P133C P149S",4
"lib2","SARS-CoV-2","ATCCAAAAACATCATC",4,0.13,NA,NA,NA,NA,NA,NA,"stop","L5M R27* F62S K87W L125E K132S",6
"lib2","SARS-CoV-2","ATCCAAAACGCCATAA",4,7.29,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","K56H V65R G83T I138Y A190C",5
"lib2","SARS-CoV-2","ATCCAAAAGAAAATAG",9,103.46,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N24Y S69P F156L",3
"lib2","SARS-CoV-2","ATCCAAAAGACAAAGT",1,8.25,10.46,-0.37,0.11,2.89,1,0,">1 nonsynonymous","N13A D97S L122H",3
"lib2","SARS-CoV-2","ATCCAAAATATTGTAT",9,255.89,10.83,-0.01,0.03,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCAAACTAACCAAC",2,57.18,10.67,-0.17,0.05,3,1,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","ATCCAAAGCCATAGTA",5,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I S139I P149I G174Y",4
"lib2","SARS-CoV-2","ATCCAAATAATACACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H A105D",2
"lib2","SARS-CoV-2","ATCCAAATCAATAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N110* G117D",2
"lib2","SARS-CoV-2","ATCCAAATCCCTGTAA",2,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54M K94V N107S P169C A190Y K198M",6
"lib2","SARS-CoV-2","ATCCAAATGCACAAAA",3,14.02,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","Y93A C102D",2
"lib2","SARS-CoV-2","ATCCAAATGGCAATAT",11,100.85,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C49Y D112H N157I",3
"lib2","SARS-CoV-2","ATCCAAATTTATATAG",14,61.7,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6Y V77M K94E I138N",4
"lib2","SARS-CoV-2","ATCCAAATTTGTAGAA",4,60.85,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K56V D112R Y119T G152I V173L",5
"lib2","SARS-CoV-2","ATCCAACAAACGCCAA",5,42.69,10.78,-0.06,0.07,2.97,1.03,0,">1 nonsynonymous","T3D N40S T46H",3
"lib2","SARS-CoV-2","ATCCAACAATACTGAA",1,1.69,NA,NA,NA,NA,NA,NA,"stop","Y35* P133*",2
"lib2","SARS-CoV-2","ATCCAACAATTTGACT",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G G83M K94V K128L P149T",5
"lib2","SARS-CoV-2","ATCCAACACCACTGCA",1,1.07,NA,NA,NA,NA,NA,NA,"stop","N1* G152M",2
"lib2","SARS-CoV-2","ATCCAACCAATTGTTA",3,88.68,10.69,-0.14,0.03,2.95,1.05,0,">1 nonsynonymous","I138M G174N",2
"lib2","SARS-CoV-2","ATCCAACCCTTCCGAA",4,50.12,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","S36T V77E L131C I138D L183S",5
"lib2","SARS-CoV-2","ATCCAACCTCTATACC",4,39,6,-4.84,2,1.5,1.12,0.02,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","ATCCAACGATCTGGCA",2,5.66,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","I88Q K94I",2
"lib2","SARS-CoV-2","ATCCAACTATTCGAAT",3,53.68,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I28R D68L",2
"lib2","SARS-CoV-2","ATCCAACTCCATGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7V S41* K128E C150S",4
"lib2","SARS-CoV-2","ATCCAACTTGCCCACC",16,294.23,10.84,0.01,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCAACTTGGGGACC",2,64.3,9.39,-1.44,0.12,1.8,1.09,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","ATCCAAGAAATGCAAT",1,9.22,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","N30A S69L L95C S200K",4
"lib2","SARS-CoV-2","ATCCAAGAACAATTAT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","G9V A14N N40D C61* A89T N107A D137T",7
"lib2","SARS-CoV-2","ATCCAAGAAGAACCAA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72S W106S Y119S",3
"lib2","SARS-CoV-2","ATCCAAGAAGCTTTGC",10,88.61,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S69K V173S",2
"lib2","SARS-CoV-2","ATCCAAGAATAACCCA",8,1.58,NA,NA,NA,NA,NA,NA,"stop","L5M A33S K56L V77K N92* F156S",6
"lib2","SARS-CoV-2","ATCCAAGACGGAACCT",19,247.66,6.29,-4.55,0.35,1.5,1.18,0.01,">1 nonsynonymous","V37D G146M Q168L",3
"lib2","SARS-CoV-2","ATCCAAGCAACAGTTA",7,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Y91C N107F",3
"lib2","SARS-CoV-2","ATCCAAGCAGACCAAA",15,99.87,8.49,-2.35,0.09,2.98,1.07,0,">1 nonsynonymous","I28W N157F",2
"lib2","SARS-CoV-2","ATCCAAGCCTTTGCAA",3,68.12,10.06,-0.77,0.05,2.91,1.04,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","ATCCAAGCGCATATAT",6,116.71,9.85,-0.98,0.05,2.05,1.06,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","ATCCAAGTAATTATAG",7,41.92,10.4,-0.43,0.09,2.89,1,0,">1 nonsynonymous","T55K D98V Q163S A192L",4
"lib2","SARS-CoV-2","ATCCAAGTTTATGGAA",3,90.04,10.81,-0.03,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCAATAACCATTAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","Q168* R179S",2
"lib2","SARS-CoV-2","ATCCAATACTTGGCCA",7,20.87,6.54,-4.3,0.71,1.5,1.15,0.07,">1 nonsynonymous","I2V N13L N40Q N118F E154I V173W",6
"lib2","SARS-CoV-2","ATCCAATAGGACGTCA",7,35.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N30R W106G K132F E154H",4
"lib2","SARS-CoV-2","ATCCAATATTATTAAC",7,51.39,10.69,-0.14,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCAATCGACAGGTA",4,22.67,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","I72Y K128L F134I",3
"lib2","SARS-CoV-2","ATCCAATCTTGGATAC",8,88.47,10.8,-0.03,0.05,2.92,1.09,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","ATCCAATGAAAGCTTA",4,87.49,10.74,-0.1,0.04,2.86,1.04,0,">1 nonsynonymous","K56L K198Q",2
"lib2","SARS-CoV-2","ATCCAATGGGTAGTTC",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107S Q144R P169R",3
"lib2","SARS-CoV-2","ATCCAATGTACCTTGG",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y I142L V182A K198C",4
"lib2","SARS-CoV-2","ATCCAATTAGCGATCA",5,104.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S41P V65T Y175S V180F",4
"lib2","SARS-CoV-2","ATCCAATTGATTGCCA",6,84.64,10.89,0.05,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCACAAACACCAAA",18,190.3,6.87,-3.97,0.31,1.5,1.15,0.02,">1 nonsynonymous","N30T A105N",2
"lib2","SARS-CoV-2","ATCCACAAACACGTTT",2,10.32,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5Q D112I Y119A I138Y A192S",5
"lib2","SARS-CoV-2","ATCCACAAATAACGCA",7,336.48,10.83,-0.01,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCACAAATATAAAC",2,12.63,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K87L K94Q F99I G155Y K198S",5
"lib2","SARS-CoV-2","ATCCACAAGACCAGCC",6,84.81,10.32,-0.51,0.04,2.88,1.07,0,">1 nonsynonymous","D75T L188P",2
"lib2","SARS-CoV-2","ATCCACAAGAGAGATT",5,19.84,10.85,0.01,0.04,2.89,1.14,0,">1 nonsynonymous","N130L S200I",2
"lib2","SARS-CoV-2","ATCCACAAGTGGTAAT",18,123.05,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95N Y165S P197A",3
"lib2","SARS-CoV-2","ATCCACAATAAACTGG",6,141.64,8.63,-2.21,0.07,2.62,1.05,0,">1 nonsynonymous","S113H K198I",2
"lib2","SARS-CoV-2","ATCCACAGAAATCGCT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68F P82M K114P",3
"lib2","SARS-CoV-2","ATCCACAGAGGAAATC",11,158.63,7.93,-2.9,0.09,1.97,1.11,0,">1 nonsynonymous","F44N K114W L122F K128L A145K",5
"lib2","SARS-CoV-2","ATCCACAGATGCCGAA",1,9.6,6,-4.84,2,3,1.04,0,">1 nonsynonymous","L38R V77E A105M",3
"lib2","SARS-CoV-2","ATCCACAGCGTACCTG",1,14.76,10.29,-0.54,0.06,2.97,1.05,0,">1 nonsynonymous","T3V V153A G174H",3
"lib2","SARS-CoV-2","ATCCACAGTATACGAA",1,6.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I N151Q",2
"lib2","SARS-CoV-2","ATCCACAGTATGAACT",6,3.65,NA,NA,NA,NA,NA,NA,"stop","F12* N30R V103L",3
"lib2","SARS-CoV-2","ATCCACATAAATCAAT",6,121.55,10.18,-0.65,0.04,2.84,1.1,0,">1 nonsynonymous","L111S N130H",2
"lib2","SARS-CoV-2","ATCCACATAAGATCAT",1,9.19,9.5,-1.34,0.09,2.91,1.06,0,">1 nonsynonymous","C61A G174C",2
"lib2","SARS-CoV-2","ATCCACATAATGCGTT",6,35.4,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18D S41E D68G Y175I",4
"lib2","SARS-CoV-2","ATCCACATTCTAAAAA",5,35.91,9.81,-1.02,0.05,2.75,1,0,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","ATCCACCAAAGGGCCA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P D34Y S45Y T55N R127W V180R",6
"lib2","SARS-CoV-2","ATCCACCAAATCTACT",5,23.13,6.29,-4.55,0.64,3,1.23,0.01,">1 nonsynonymous","Y93C Q144L S200I",3
"lib2","SARS-CoV-2","ATCCACCACCCTGTAC",2,26.25,6,-4.84,2,3,1.23,0,">1 nonsynonymous","N30V C61A D98F Q168I",4
"lib2","SARS-CoV-2","ATCCACCACCGAAAAA",2,48.6,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","V37P F44G Y119T C158L Q168L Y178N",6
"lib2","SARS-CoV-2","ATCCACCACTTTAGGG",7,64.66,6.69,-4.15,0.4,1.5,1.12,0.02,">1 nonsynonymous","V77G N110L Q144D F156P T201D",5
"lib2","SARS-CoV-2","ATCCACCATGATCTTT",6,32.34,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","E10K T15D I104W L125T F167D",5
"lib2","SARS-CoV-2","ATCCACCCAAGCATAA",13,17.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49K W106H V180S",3
"lib2","SARS-CoV-2","ATCCACCCCTTACAGA",10,251.33,10.82,-0.01,0.03,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCACCGCTACGTGA",9,50.81,10.56,-0.28,0.07,2.88,1.09,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","ATCCACCTCCCATACA",2,21.84,10.92,0.08,0.08,2.95,1.07,0,">1 nonsynonymous","Q163S S200P",2
"lib2","SARS-CoV-2","ATCCACCTGATATAAT",2,19.39,9.07,-1.77,0.13,2.03,1.04,0.01,">1 nonsynonymous","C6A K56P",2
"lib2","SARS-CoV-2","ATCCACCTGGAACAGT",7,129.06,10.66,-0.18,0.03,2.98,1.01,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","ATCCACGAGTCCTTCA",4,2.79,NA,NA,NA,NA,NA,NA,"stop","C6* S45A G51I D98V",4
"lib2","SARS-CoV-2","ATCCACGATAAGTATG",3,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V S36Y I104T",3
"lib2","SARS-CoV-2","ATCCACGCCATCCAGA",5,20.67,7.28,-3.55,0.48,1.5,1.12,0.07,">1 nonsynonymous","T3S S139M G146Q R179L",4
"lib2","SARS-CoV-2","ATCCACGGCACAAAGT",5,72.17,10.56,-0.27,0.04,2.9,1.1,0,">1 nonsynonymous","S129P E154S",2
"lib2","SARS-CoV-2","ATCCACGTACAAACGA",6,25.3,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A14I K56W D97V N120G G152R V180E",6
"lib2","SARS-CoV-2","ATCCACGTGAATAATA",1,31.98,10.8,-0.03,0.06,2.95,1.08,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","ATCCACTAAATGAACC",2,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G N92A Y123T",3
"lib2","SARS-CoV-2","ATCCACTATGACGAGT",3,111.78,10.42,-0.42,0.06,2.86,1.06,0,">1 nonsynonymous","N64Q Y123L",2
"lib2","SARS-CoV-2","ATCCACTCAAAATAAC",3,6.4,6.12,-4.71,1.28,3,1.12,0.07,">1 nonsynonymous","T85L L95T Q144M Q176L S200G",5
"lib2","SARS-CoV-2","ATCCACTTCAGGATAA",3,45.99,10.21,-0.63,0.07,2.85,1.08,0,">1 nonsynonymous","S41V T140I F160S",3
"lib2","SARS-CoV-2","ATCCAGAACGACAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K S41G S147K G152H Q176R",5
"lib2","SARS-CoV-2","ATCCAGACGTCTTTGG",6,129.73,10.29,-0.55,0.03,2.89,1.07,0,">1 nonsynonymous","T100N I142T",2
"lib2","SARS-CoV-2","ATCCAGAGGGAAGTTT",3,20.65,9.54,-1.3,0.09,2.97,1.02,0,">1 nonsynonymous","S113T P149A",2
"lib2","SARS-CoV-2","ATCCAGAGTGATTAAC",4,40.7,8.89,-1.94,0.11,1.61,1.2,0,">1 nonsynonymous","C61E D68M N110T",3
"lib2","SARS-CoV-2","ATCCAGAGTTAGTTAC",8,121.3,7.31,-3.53,0.24,1.5,1.06,0.02,">1 nonsynonymous","V37M K87S N107I",3
"lib2","SARS-CoV-2","ATCCAGATGTCTCATG",2,72.02,10.66,-0.17,0.04,2.98,1.01,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","ATCCAGCATAGGGCAT",3,40.77,10.87,0.03,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCAGCGACCCGCCC",10,15.02,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3I G86F W106D T170S",4
"lib2","SARS-CoV-2","ATCCAGCTAGAATTTC",9,67.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V77P S113C",2
"lib2","SARS-CoV-2","ATCCAGCTGTCAATAT",2,0.91,NA,NA,NA,NA,NA,NA,"stop","D68K E76D P82* K198S",4
"lib2","SARS-CoV-2","ATCCAGCTTCACCACC",4,0.06,NA,NA,NA,NA,NA,NA,"stop","G9T S129I G146* A192E",4
"lib2","SARS-CoV-2","ATCCAGGATGTGCACG",1,21.68,10.61,-0.23,0.05,2.97,1.03,0,">1 nonsynonymous","G9M K132L A192S P197T",4
"lib2","SARS-CoV-2","ATCCAGGCACGTGAAT",21,96.78,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F70R D97V",2
"lib2","SARS-CoV-2","ATCCAGGCGCATTAAA",5,0.46,NA,NA,NA,NA,NA,NA,"stop","I2M K94* T100C W106R E135C",5
"lib2","SARS-CoV-2","ATCCAGGCGCCTGAAT",9,104.48,10.75,-0.08,0.02,3,1.01,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","ATCCAGGCTGAACAAG",3,54.58,9.69,-1.14,0.08,2.48,1.06,0,">1 nonsynonymous","Q79L D98S",2
"lib2","SARS-CoV-2","ATCCAGGGCAACTGAG",12,96.7,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A14T A67H I138Y",3
"lib2","SARS-CoV-2","ATCCAGGTGCCTTCAA",3,35.64,10.85,0.01,0.05,3,1.01,0,"1 nonsynonymous","E154Q",1
"lib2","SARS-CoV-2","ATCCAGTAAATGAGAA",1,13.36,9.3,-1.53,0.15,2.94,1.14,0.01,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","ATCCAGTACTAAATGT",4,46.62,10.15,-0.69,0.09,2.55,1.02,0,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","ATCCAGTACTTCAAAA",3,5.15,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G83P E141T",2
"lib2","SARS-CoV-2","ATCCAGTATCATTATC",8,68.06,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","F44S F47R A105L Y165W",4
"lib2","SARS-CoV-2","ATCCAGTCAAATTAGA",2,19.99,10.13,-0.71,0.08,2.28,1.02,0.01,">1 nonsynonymous","N40A P133K",2
"lib2","SARS-CoV-2","ATCCAGTCAAATTTTC",4,70.92,10.82,-0.02,0.03,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCCAGTCCCAATTCC",9,147.31,9.03,-1.81,0.05,2.45,1.09,0,"1 nonsynonymous","G74F",1
"lib2","SARS-CoV-2","ATCCAGTCGAATATAA",1,20.55,10.83,0,0.1,2.89,1.14,0.01,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","ATCCAGTGAATCAGAA",15,173.29,9.89,-0.95,0.07,2.59,1.05,0,">1 nonsynonymous","C6F Y35A T63A T201M",4
"lib2","SARS-CoV-2","ATCCATAAAGCCATTA",2,50.78,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40T R73P N107I L122E P133W G155I",6
"lib2","SARS-CoV-2","ATCCATAACTTTGACC",2,30.73,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","T3M P82R N107S D112N G117V R127F S147L",7
"lib2","SARS-CoV-2","ATCCATAAGTAGTTGA",5,24.58,10.83,-0.01,0.09,2.87,1.14,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","ATCCATAATTGATTCA",2,0.7,NA,NA,NA,NA,NA,NA,"stop","P7* P82S T100S G116Q F160* G174E",6
"lib2","SARS-CoV-2","ATCCATACAACATATA",5,112.59,10.3,-0.54,0.03,2.88,1.06,0,">1 nonsynonymous","G9Q S36N D90H V153S",4
"lib2","SARS-CoV-2","ATCCATACGAAAGAAT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S Y93T",2
"lib2","SARS-CoV-2","ATCCATACTAATCGGC",1,8.23,10.73,-0.1,0.18,2.69,1.28,0.01,">1 nonsynonymous","S41T E141V",2
"lib2","SARS-CoV-2","ATCCATACTAATTACA",10,288.4,9.79,-1.04,0.04,2.8,1.04,0,">1 nonsynonymous","E10G V37A G155C",3
"lib2","SARS-CoV-2","ATCCATACTGCAGATG",10,190.3,8.35,-2.49,0.1,2.27,1.07,0,">1 nonsynonymous","F62Y A81I Y119D",3
"lib2","SARS-CoV-2","ATCCATACTTAAATCG",3,60.89,10.31,-0.53,0.05,2.96,1.05,0,">1 nonsynonymous","P7N V77L E141G G155S",4
"lib2","SARS-CoV-2","ATCCATAGTAGAAGAC",4,31.01,8.53,-2.3,0.31,1.5,1,0.04,">1 nonsynonymous","G9V T55L N92S T100L T148C",5
"lib2","SARS-CoV-2","ATCCATAGTGAAGATG",7,28.07,8.58,-2.26,0.33,1.5,1,0.06,">1 nonsynonymous","I2W S108F Q163F",3
"lib2","SARS-CoV-2","ATCCATATAAAGGTCC",7,76.28,10.84,0,0.08,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCATATCACCACAG",6,117.49,8.13,-2.7,0.1,2.27,1.07,0,">1 nonsynonymous","K87S I138W T170M T201K",4
"lib2","SARS-CoV-2","ATCCATCAATGGGTTT",4,42.37,6,-4.84,1.26,1.5,1.15,0.01,">1 nonsynonymous","W23A T55I I72W",3
"lib2","SARS-CoV-2","ATCCATCACATAAAAG",16,159.04,10.18,-0.66,0.04,2.71,1.05,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","ATCCATCATAAGGAAT",3,49.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86V N130R",2
"lib2","SARS-CoV-2","ATCCATCATTAATGAG",3,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R D34R L60Y G174M",4
"lib2","SARS-CoV-2","ATCCATCGACCGTAAC",7,109.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L38H L125K K199T",3
"lib2","SARS-CoV-2","ATCCATCTATATGCCT",12,57.83,9.71,-1.12,0.11,2.27,1.04,0.01,">1 nonsynonymous","S41L V65F A89S N110S G152A K198Y",6
"lib2","SARS-CoV-2","ATCCATGAATAAAAGT",5,18.76,7.99,-2.84,0.41,1.5,1,0.04,">1 nonsynonymous","K87V C102G T148E R179I T201I",5
"lib2","SARS-CoV-2","ATCCATGAATGCTTAC",6,3.63,NA,NA,NA,NA,NA,NA,"stop","F12H L60R Y119G P149* G155F",5
"lib2","SARS-CoV-2","ATCCATGAGCCACCTT",10,107.05,8.74,-2.1,0.12,1.5,1.08,0.01,">1 nonsynonymous","V37L I88S D98N T201M",4
"lib2","SARS-CoV-2","ATCCATGAGTACAACG",3,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R W106D",2
"lib2","SARS-CoV-2","ATCCATGATAATTAAT",3,41.33,10.95,0.12,0.06,2.99,1.01,0,"1 nonsynonymous","N120K",1
"lib2","SARS-CoV-2","ATCCATGCAAAGACTG",3,0.24,NA,NA,NA,NA,NA,NA,"stop","A145*",1
"lib2","SARS-CoV-2","ATCCATGCTTGGATCC",1,10.76,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L5H A81G N107I L125N P177N",5
"lib2","SARS-CoV-2","ATCCATGGCCTGCTGA",4,114.25,10.82,-0.01,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCATGTAACCGGTT",3,32.08,10.6,-0.24,0.07,2.91,1.08,0,">1 nonsynonymous","D98A K128Q",2
"lib2","SARS-CoV-2","ATCCATGTGCTGCGCG",4,74.18,10.51,-0.33,0.04,2.93,1.07,0,">1 nonsynonymous","I104V E141S V173A K198P",4
"lib2","SARS-CoV-2","ATCCATGTTCACTCGT",1,31.11,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N4T V77Y P149F",3
"lib2","SARS-CoV-2","ATCCATGTTGTCAAAG",10,68.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D34L I72T G86A",3
"lib2","SARS-CoV-2","ATCCATTAAAAACGAG",1,14.25,8.97,-1.86,0.16,2.47,1.05,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","ATCCATTAAAGAGAAC",7,113.53,10.46,-0.38,0.02,2.92,1.04,0,">1 nonsynonymous","A42L C61T N130Y",3
"lib2","SARS-CoV-2","ATCCATTAACCGCTTT",9,131.91,10.41,-0.42,0.04,2.87,1.09,0,">1 nonsynonymous","C61H T85L",2
"lib2","SARS-CoV-2","ATCCATTAAGAGTAAA",5,102.41,6,-4.84,2,2.9,1.18,0,">1 nonsynonymous","F17I A81T A89S I104M Q176H T201Q",6
"lib2","SARS-CoV-2","ATCCATTACACTCCGT",7,60.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P96S D112V Y123F Y165T",4
"lib2","SARS-CoV-2","ATCCATTACTACCATT",8,166.08,10.87,0.03,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCCATTCAATGGTTT",14,163.81,10.72,-0.11,0.04,2.9,1.11,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","ATCCATTGAATACACA",7,130.97,10.79,-0.04,0.05,2.9,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCCCAAAAAATGGTT",1,7,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","L95R N107Q I142D Q163K",4
"lib2","SARS-CoV-2","ATCCCAAAAACAAATG",2,7.22,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","D34H P82M W106L L122K N157I",5
"lib2","SARS-CoV-2","ATCCCAAAGAAACTAC",1,30.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R27A S113F K128V",3
"lib2","SARS-CoV-2","ATCCCAAATCGACCTG",4,10.57,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","R25F F44S G101M Y143V P169S",5
"lib2","SARS-CoV-2","ATCCCAACGTGCATTA",3,49.03,10.22,-0.61,0.03,2.9,1.11,0,"1 nonsynonymous","G152I",1
"lib2","SARS-CoV-2","ATCCCAAGAGGGCATA",4,13.25,NA,NA,NA,NA,NA,NA,"stop","V32* Y39E F44N G51R L122T",5
"lib2","SARS-CoV-2","ATCCCAAGTATCAGCA",18,152.73,9.26,-1.58,0.18,1.56,1.12,0.01,">1 nonsynonymous","F44Q L60Q Q84V R127A P197R",5
"lib2","SARS-CoV-2","ATCCCAATTACTAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","C61A L122* E135S N171R G196P",5
"lib2","SARS-CoV-2","ATCCCACATCAGAAAC",1,8.03,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","G74R K94F G146S",3
"lib2","SARS-CoV-2","ATCCCACATTGTGCAG",3,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M L38R F70L Y123T",4
"lib2","SARS-CoV-2","ATCCCACGATAAGGTT",2,14.12,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","Y50F N157K R179L",3
"lib2","SARS-CoV-2","ATCCCACTAACATAGG",12,149.43,10.21,-0.62,0.05,2.55,1,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","ATCCCACTTTTGCTAA",1,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141G E154M",2
"lib2","SARS-CoV-2","ATCCCAGAAACCAAAA",2,53.1,10.84,0,0.05,3,1.03,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","ATCCCAGCATGACGAC",3,17.03,8.52,-2.32,0.35,1.5,1,0.06,">1 nonsynonymous","L5R D75S P149S Y175L",4
"lib2","SARS-CoV-2","ATCCCAGCTACGCGTG",2,6.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128I P169N",2
"lib2","SARS-CoV-2","ATCCCAGTAGGATTAG",2,25.5,9.87,-0.96,0.14,1.93,1.05,0.01,">1 nonsynonymous","K94L V173R",2
"lib2","SARS-CoV-2","ATCCCAGTATTGTGTC",6,95.06,8.37,-2.46,0.14,1.78,1.11,0.01,">1 nonsynonymous","G86R A145G",2
"lib2","SARS-CoV-2","ATCCCAGTGCAATAAT",1,22.39,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","C6N L95W T148L C158N",4
"lib2","SARS-CoV-2","ATCCCAGTTAAGATAA",5,20.03,10.77,-0.07,0.1,2.86,1.15,0,"1 nonsynonymous","S36G",1
"lib2","SARS-CoV-2","ATCCCATAAAGTGGTT",1,78.68,10.09,-0.75,0.05,2.76,1.05,0,">1 nonsynonymous","N64A N107K A190E",3
"lib2","SARS-CoV-2","ATCCCATATCGTCGGC",3,57.08,9.78,-1.05,0.17,2.12,1.07,0.01,">1 nonsynonymous","S36W T63M T100A K114M",4
"lib2","SARS-CoV-2","ATCCCATCGTCAGCTT",6,113.21,9.91,-0.92,0.05,2.84,1.01,0,">1 nonsynonymous","D90F G155S",2
"lib2","SARS-CoV-2","ATCCCATGAGAGGATT",3,33.34,9.67,-1.16,0.09,1.94,1.07,0,">1 nonsynonymous","T15W C61L T85N",3
"lib2","SARS-CoV-2","ATCCCATGGATATGGC",4,98.85,7.94,-2.9,0.1,1.8,1.08,0,">1 nonsynonymous","V52L C158S",2
"lib2","SARS-CoV-2","ATCCCATTAGTGAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K A33L G51V",3
"lib2","SARS-CoV-2","ATCCCATTCAAAATAA",5,57.11,NA,NA,NA,NA,NA,NA,"stop","K26* K94G N130D",3
"lib2","SARS-CoV-2","ATCCCCAAATTCGTGG",6,122.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86S C102L Q168P Q176A",4
"lib2","SARS-CoV-2","ATCCCCAAGCATCTAA",8,0.83,NA,NA,NA,NA,NA,NA,"stop","N110G K132*",2
"lib2","SARS-CoV-2","ATCCCCACAAAATGGT",8,13.12,6.02,-4.81,2,1.5,1.23,0.08,">1 nonsynonymous","A14V K48G D137W",3
"lib2","SARS-CoV-2","ATCCCCACAAACTATA",11,39.81,6.37,-4.47,0.95,1.5,1.27,0.04,">1 nonsynonymous","G83T I104R V115W",3
"lib2","SARS-CoV-2","ATCCCCACAGGATCGG",11,137.71,10.7,-0.14,0.03,2.86,1.12,0,">1 nonsynonymous","L122S S129A E186V",3
"lib2","SARS-CoV-2","ATCCCCACATTTCAAT",3,119.36,8.5,-2.34,0.06,2.59,1.09,0,">1 nonsynonymous","G9S R73G D97G",3
"lib2","SARS-CoV-2","ATCCCCACGAGAAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q Y123S",2
"lib2","SARS-CoV-2","ATCCCCAGGTAACAAA",9,43.57,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S41R V71R R78G P96W V153E Q168K S200T",7
"lib2","SARS-CoV-2","ATCCCCATAAATTCAA",1,16.44,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A42G N120K G152N F167R K199N",5
"lib2","SARS-CoV-2","ATCCCCATCAGATTGT",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74Y D90T W106S",3
"lib2","SARS-CoV-2","ATCCCCATCGAACCGT",23,461.9,9.19,-1.65,0.06,2.85,1.08,0,">1 nonsynonymous","C31E F156S",2
"lib2","SARS-CoV-2","ATCCCCCAAGCCGGCA",8,0.63,NA,NA,NA,NA,NA,NA,"stop","I28Q D98S F167*",3
"lib2","SARS-CoV-2","ATCCCCCACAAATTTG",2,8.08,7.09,-3.75,0.61,1.5,1.26,0.07,">1 nonsynonymous","Y50C E141L Q168F",3
"lib2","SARS-CoV-2","ATCCCCCAGTCTGGTA",2,16.25,9.42,-1.41,0.14,2.14,1.11,0.01,">1 nonsynonymous","N64P W106M G196V",3
"lib2","SARS-CoV-2","ATCCCCCCTGAAAGAC",1,25.84,7.53,-3.3,0.2,1.5,1.08,0.01,">1 nonsynonymous","T85C N92D P197Y",3
"lib2","SARS-CoV-2","ATCCCCCGCCCACAAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","F62T G86V L162* Y178*",4
"lib2","SARS-CoV-2","ATCCCCCGCTTGCATG",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46Y K87S A105I Y121K Y165R",5
"lib2","SARS-CoV-2","ATCCCCCGTCGAAAAT",2,14.53,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V52K D98L P149W",3
"lib2","SARS-CoV-2","ATCCCCCTCCGGATGA",5,66,10.45,-0.39,0.04,2.91,1.09,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","ATCCCCGACCCAGGTT",8,33.38,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","F8R N64F T100V R136K",4
"lib2","SARS-CoV-2","ATCCCCGAGATTTTCT",5,123.34,10.91,0.07,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCCCGGCTATCTCG",6,26.52,8.47,-2.36,0.16,1.71,1.14,0.01,">1 nonsynonymous","F99W L122P",2
"lib2","SARS-CoV-2","ATCCCCGTCATAGCCT",1,8.13,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","V20W F44S K56V",3
"lib2","SARS-CoV-2","ATCCCCGTGGCCCTAT",5,51.11,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","E10W D90P N157D",3
"lib2","SARS-CoV-2","ATCCCCTAGAACTTTG",16,2.78,NA,NA,NA,NA,NA,NA,"stop","N58S T85S Y119* T201N",4
"lib2","SARS-CoV-2","ATCCCCTATTCAAGCG",6,41.25,6,-4.84,1.02,3,1.11,0,">1 nonsynonymous","N13L Y123D",2
"lib2","SARS-CoV-2","ATCCCCTTAATCCGGA",4,10.71,10.81,-0.03,0.11,2.87,1.15,0,">1 nonsynonymous","V37N S200R",2
"lib2","SARS-CoV-2","ATCCCCTTCAGTTAAA",5,72.16,8.49,-2.34,0.08,2.93,1.04,0,">1 nonsynonymous","V37L D59S I142A G152P",4
"lib2","SARS-CoV-2","ATCCCCTTTGATCCTA",14,35.73,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","V103K S113L",2
"lib2","SARS-CoV-2","ATCCCGACATCACAAG",4,15.14,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L38R T100P L162S",3
"lib2","SARS-CoV-2","ATCCCGACCGTGTCAG",5,99.27,9.02,-1.82,0.12,1.61,1.15,0,">1 nonsynonymous","F8K K128S E141S",3
"lib2","SARS-CoV-2","ATCCCGAGTGTATTCC",7,23.91,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","A14M V37L L95S V103I C158S",5
"lib2","SARS-CoV-2","ATCCCGCACTAGCACA",5,57.03,10.28,-0.56,0.05,2.82,1.02,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","ATCCCGCAGAAATACT",2,12.11,7.96,-2.87,0.19,1.5,1.06,0.01,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","ATCCCGCCCGAGACCG",10,145.07,9.56,-1.27,0.03,2.89,1.06,0,">1 nonsynonymous","T3H Y143V",2
"lib2","SARS-CoV-2","ATCCCGCGATGTCCGC",2,56.3,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S36K C158M Q176K",3
"lib2","SARS-CoV-2","ATCCCGCTTCGCTAAA",1,78.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y121N K128C S147A G152D Q176R K198T",6
"lib2","SARS-CoV-2","ATCCCGGTGCCTTGAA",13,175.32,7.36,-3.48,0.27,1.5,1.15,0.02,">1 nonsynonymous","N13D D34Y S36L T55N E135A",5
"lib2","SARS-CoV-2","ATCCCGGTTACGTCGA",9,141.57,8.58,-2.26,0.06,2.14,1.07,0,">1 nonsynonymous","G9R S43K G83N A89I F156L",5
"lib2","SARS-CoV-2","ATCCCGTAACTAAAAA",1,76.59,10.72,-0.12,0.04,2.99,1,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","ATCCCGTAGGGCTGCG",5,72.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48F A89L G116R A192E",4
"lib2","SARS-CoV-2","ATCCCGTATCCATCAT",10,139.11,9.36,-1.48,0.06,1.73,1.06,0,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","ATCCCGTATTCGTTAA",2,7.76,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","L5T R124G E154L",3
"lib2","SARS-CoV-2","ATCCCGTCTTATTGGC",6,8.22,NA,NA,NA,NA,NA,NA,"stop","A14M D90T S129* F156N",4
"lib2","SARS-CoV-2","ATCCCGTCTTCAAATG",2,32.64,10.81,-0.03,0.06,2.88,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCCGTCTTCATCCA",3,23.63,10.47,-0.37,0.06,2.94,1.03,0,">1 nonsynonymous","K26L T85M",2
"lib2","SARS-CoV-2","ATCCCGTGATCATAAT",1,15.87,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","N4T V11P R25V A33Q K94F S129Y P191R",7
"lib2","SARS-CoV-2","ATCCCGTTTCGCCTAT",5,65.83,6.38,-4.45,0.51,1.5,1.16,0.02,">1 nonsynonymous","V37Y F47L N107L Q144R",4
"lib2","SARS-CoV-2","ATCCCTAACCACACTT",8,72.34,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N13S W23L I80M G86L L122K S184F",6
"lib2","SARS-CoV-2","ATCCCTAATTTACGGA",12,99.9,10.6,-0.24,0.04,2.96,1.05,0,"1 nonsynonymous","N120W",1
"lib2","SARS-CoV-2","ATCCCTACTAATTGAC",5,21.15,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","Y50A S139V F160H",3
"lib2","SARS-CoV-2","ATCCCTACTTAGACAA",4,99.7,10.15,-0.68,0.07,2.53,1.01,0,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","ATCCCTAGATACCGCT",4,0.58,NA,NA,NA,NA,NA,NA,"stop","A81* G117L",2
"lib2","SARS-CoV-2","ATCCCTATAAAGATAC",12,116.05,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L57S S113P F126V",3
"lib2","SARS-CoV-2","ATCCCTATAATTTAGC",17,160.74,7.78,-3.06,0.1,2.42,1.08,0,">1 nonsynonymous","N120T Q144T F156A G166T",4
"lib2","SARS-CoV-2","ATCCCTATTAGTAAAA",3,0.63,NA,NA,NA,NA,NA,NA,"stop","R27* S53D L60S A89E Y159L",5
"lib2","SARS-CoV-2","ATCCCTCAACCCAAAT",2,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R F70L S164Y",3
"lib2","SARS-CoV-2","ATCCCTCACCAAAATT",10,160.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N24Y C31S T63V F134R",4
"lib2","SARS-CoV-2","ATCCCTCACCATAAGG",8,113.38,8.62,-2.22,0.19,1.5,1.07,0.01,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","ATCCCTCAGACAATGC",2,66.36,9.75,-1.09,0.07,2.11,1,0,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","ATCCCTCGTATATTAG",4,67.63,7.34,-3.5,0.2,1.67,1.11,0.01,">1 nonsynonymous","V32W N109H N120P Y143L P197M",5
"lib2","SARS-CoV-2","ATCCCTCTGAATAAAA",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V K56E T63F L95I",4
"lib2","SARS-CoV-2","ATCCCTGAAAATAGGT",1,29.43,6,-4.84,1.09,1.5,1.11,0.01,">1 nonsynonymous","P7L S36M K48W C61M Y91L F99Y S139I S200T",8
"lib2","SARS-CoV-2","ATCCCTGAAATACCGA",5,191.57,10.6,-0.24,0.03,2.92,1.03,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","ATCCCTGACCTATAAC",2,22.63,9.09,-1.75,0.1,2.66,1.28,0,">1 nonsynonymous","A33M G166I",2
"lib2","SARS-CoV-2","ATCCCTGGACTTACAC",1,31.34,10.78,-0.05,0.15,2.48,1.15,0.01,"1 nonsynonymous","T85N",1
"lib2","SARS-CoV-2","ATCCCTGGCTATGACG",4,27.71,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L5V G101T V173G",3
"lib2","SARS-CoV-2","ATCCCTTAATACCTAT",7,67.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V37L F62E W106S P133E",4
"lib2","SARS-CoV-2","ATCCCTTAGTAACGGA",1,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141Y",1
"lib2","SARS-CoV-2","ATCCCTTATGGCATAA",2,40.24,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","R16I Y39Q G101D Y143A",4
"lib2","SARS-CoV-2","ATCCGAAAATAAAATA",3,26.87,9.73,-1.1,0.18,1.88,1.1,0.01,">1 nonsynonymous","L38G K198A",2
"lib2","SARS-CoV-2","ATCCGAAATCATACCT",2,21.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14I V20R R25K T55S T170Y P197S",6
"lib2","SARS-CoV-2","ATCCGAACATGAGATT",4,120.67,9.9,-0.93,0.05,2.26,1.05,0,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","ATCCGAACCTCTTGCA",1,14.12,9.24,-1.59,0.23,2.03,1.31,0.03,"1 nonsynonymous","F12A",1
"lib2","SARS-CoV-2","ATCCGAACCTTGTTCC",2,118.27,9.12,-1.71,0.06,2.93,1.1,0,">1 nonsynonymous","D59H G117V",2
"lib2","SARS-CoV-2","ATCCGAAGATAACAAA",4,71.06,10.2,-0.63,0.03,2.89,1.03,0,">1 nonsynonymous","P54Y L60M T140S T148P",4
"lib2","SARS-CoV-2","ATCCGAAGCATATCCG",2,39.32,8.25,-2.59,0.16,2.28,1.16,0.01,"1 nonsynonymous","Y143D",1
"lib2","SARS-CoV-2","ATCCGAAGCCACCACC",1,30.44,9.88,-0.95,0.07,2.75,1.16,0,">1 nonsynonymous","R16S Q144M F156S",3
"lib2","SARS-CoV-2","ATCCGAAGTGTACACG",1,119.06,10.16,-0.68,0.06,2.59,1.03,0,">1 nonsynonymous","R136T V173R A190H",3
"lib2","SARS-CoV-2","ATCCGAATAAATCCCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L S43N D112F G146L N151E F156T",6
"lib2","SARS-CoV-2","ATCCGAATCCCGACAA",2,126.21,10.25,-0.58,0.04,2.88,1.05,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","ATCCGAATTGCACAAT",4,28.88,9.2,-1.64,0.2,1.84,1.18,0.02,">1 nonsynonymous","A89F T100L",2
"lib2","SARS-CoV-2","ATCCGACAATAGATAA",4,105.89,10.78,-0.05,0.04,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGACATTTACCTA",5,81.96,10.81,-0.03,0.04,2.9,1.09,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","ATCCGACCCCTTGGTG",15,127.04,10.81,-0.03,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGACGCATAGAAT",2,7.67,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10C Y21G D59T D90N D137S T201E",6
"lib2","SARS-CoV-2","ATCCGACTAACTAATT",4,6.13,6,-4.84,0.74,3,1,0.01,">1 nonsynonymous","F99I N107V Y121I",3
"lib2","SARS-CoV-2","ATCCGAGCAAATGCTC",1,27.98,9.18,-1.65,0.06,2.88,1.06,0,">1 nonsynonymous","I142R N151E",2
"lib2","SARS-CoV-2","ATCCGAGGTAGTTAAA",2,46.26,9.29,-1.54,0.07,2.89,1.04,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","ATCCGAGGTGTAGGAC",2,17.63,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","ATCCGATAATCCAAAC",2,25.28,10.29,-0.55,0.08,2.89,1.15,0,">1 nonsynonymous","I2S G51R T63G Q144S",4
"lib2","SARS-CoV-2","ATCCGATGAAGGCCTA",4,45.49,8.15,-2.69,0.2,2.28,1.07,0.01,">1 nonsynonymous","V37Y K87S I138V G146M",4
"lib2","SARS-CoV-2","ATCCGATGAGAATATT",3,20.13,9.37,-1.46,0.05,1.99,1.09,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","ATCCGATGTACATGCA",1,48.47,8.4,-2.44,0.18,1.54,1.15,0.01,">1 nonsynonymous","Y39P L57C L162V",3
"lib2","SARS-CoV-2","ATCCGATTAAAGCTTG",1,20.6,9.17,-1.66,0.17,1.92,1.04,0.01,">1 nonsynonymous","T85W D98G T140G E154L P197S",5
"lib2","SARS-CoV-2","ATCCGCAACGAGTGAG",6,80.86,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5V N24L G101P P149F",4
"lib2","SARS-CoV-2","ATCCGCAAGGAATACT",17,229.45,10.88,0.04,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGCAATGAGATGT",16,165.8,6.29,-4.55,0.65,1.5,1.18,0.02,">1 nonsynonymous","A14Y I28R Y35S",3
"lib2","SARS-CoV-2","ATCCGCACCCTCCCTG",3,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N A18R D34Y T63V I80L T85R I142R C158I",8
"lib2","SARS-CoV-2","ATCCGCATATACTTCA",1,24.48,10.8,-0.03,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGCATGAAAACGT",6,37.17,9.82,-1.02,0.16,2.06,1.16,0.01,">1 nonsynonymous","G51T N120Y",2
"lib2","SARS-CoV-2","ATCCGCATTAGTACAA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","ATCCGCATTGTATGGT",1,18.92,10.84,0,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGCCCACCTTTAC",9,83.38,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I28T S36L G51V",3
"lib2","SARS-CoV-2","ATCCGCCGCAAACACA",8,31.71,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6F A22P F70R N130D T140V",5
"lib2","SARS-CoV-2","ATCCGCGAAATAATTT",4,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R N92G I138S P149N S200Y",5
"lib2","SARS-CoV-2","ATCCGCGCCACGTGAC",4,17.12,9.59,-1.25,0.13,2.89,1.05,0.01,">1 nonsynonymous","Q84T Y119F G152N",3
"lib2","SARS-CoV-2","ATCCGCTCATAATATG",2,10.32,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","P82L K94S R136F",3
"lib2","SARS-CoV-2","ATCCGCTGAAAAGGTA",8,98.62,6.63,-4.21,0.26,1.5,1.12,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","ATCCGGAACAAAAATT",5,67.09,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V32P A81I R136G",3
"lib2","SARS-CoV-2","ATCCGGAACAGAACAT",1,44.31,7.47,-3.37,0.14,2,1.04,0.01,">1 nonsynonymous","Y93F I142N F160H",3
"lib2","SARS-CoV-2","ATCCGGACTCGTTTGC",2,7.83,9.85,-0.98,0.17,2.03,1,0.01,">1 nonsynonymous","V11S S139N T201K",3
"lib2","SARS-CoV-2","ATCCGGAGATATCCTA",7,0.72,NA,NA,NA,NA,NA,NA,"stop","S19* Y91D",2
"lib2","SARS-CoV-2","ATCCGGATCAAAACAT",6,2.02,NA,NA,NA,NA,NA,NA,"stop","N40V D90S I142* K199M",4
"lib2","SARS-CoV-2","ATCCGGATGTGTGATC",1,36.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S69V Y93I G146R G174T T201W",5
"lib2","SARS-CoV-2","ATCCGGATTAATACCG",5,12.42,8.9,-1.94,0.08,2.13,1.02,0,">1 nonsynonymous","I28C K56Y G146D",3
"lib2","SARS-CoV-2","ATCCGGATTATGGTCA",11,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N40K C61P N151C",4
"lib2","SARS-CoV-2","ATCCGGCACCATTTTA",2,86.57,10.42,-0.42,0.04,2.94,1.03,0,">1 nonsynonymous","A14K K48V",2
"lib2","SARS-CoV-2","ATCCGGCCAATTGAGG",5,100.03,8.27,-2.57,0.11,2.37,1.07,0,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","ATCCGGCCATGGACCA",3,49.12,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N64S N107V F126S S147Y",4
"lib2","SARS-CoV-2","ATCCGGCGCAACAATC",2,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87F L95K",2
"lib2","SARS-CoV-2","ATCCGGCTGATTCTCT",21,253.03,8.36,-2.47,0.1,2.26,1.08,0,">1 nonsynonymous","T85N T170L",2
"lib2","SARS-CoV-2","ATCCGGGACAAAAGAA",4,1.17,NA,NA,NA,NA,NA,NA,"stop","E10G N151I F156H L183*",4
"lib2","SARS-CoV-2","ATCCGGGACTCACATT",11,79.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P D97V F134D E141W",4
"lib2","SARS-CoV-2","ATCCGGTAAATGCACT",5,74.93,10.8,-0.04,0.02,2.96,1.06,0,">1 nonsynonymous","Y35L E141V",2
"lib2","SARS-CoV-2","ATCCGGTATAAGACTG",2,21.66,10.78,-0.06,0.08,2.77,1.26,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","ATCCGGTCATATGCAG",7,127.32,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N30S S113L Y165L",3
"lib2","SARS-CoV-2","ATCCGGTTGACGCAAT",11,106.2,6,-4.84,1.59,1.5,1.15,0,">1 nonsynonymous","G86I Y93C",2
"lib2","SARS-CoV-2","ATCCGGTTGTCTTAAT",3,52.31,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V65S D90T D97A Y119D F156H",5
"lib2","SARS-CoV-2","ATCCGTAAAGCCATGG",2,11.46,10.82,-0.01,0.06,3,1.03,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","ATCCGTAACAAACACT",3,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W V103C",2
"lib2","SARS-CoV-2","ATCCGTAAGAAAGTCA",3,202.75,10.81,-0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCGTACCCGCTGAA",4,101.84,9.29,-1.54,0.04,2.9,1.09,0,">1 nonsynonymous","F8W K128V P169E",3
"lib2","SARS-CoV-2","ATCCGTAGTAAACATC",9,140.33,10.83,-0.01,0.03,2.96,1.05,0,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","ATCCGTATACCCCAAG",3,53.89,7.49,-3.35,0.34,1.5,1.11,0.03,">1 nonsynonymous","N1G I88C Y119S",3
"lib2","SARS-CoV-2","ATCCGTCAAACCCAAC",4,17.84,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K87G Y93S P149M",3
"lib2","SARS-CoV-2","ATCCGTCAATATTTCT",2,41.69,10.34,-0.49,0.05,2.93,1.02,0,"1 nonsynonymous","G83T",1
"lib2","SARS-CoV-2","ATCCGTCACGGCGCCT",2,47.73,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F8G A14Q T148F Y165L",4
"lib2","SARS-CoV-2","ATCCGTGAACTATACA",13,194.01,10.92,0.08,0.05,2.97,1.04,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","ATCCGTGACGATTTTG",2,30.4,10.71,-0.12,0.08,2.81,1.15,0,"1 nonsynonymous","E154A",1
"lib2","SARS-CoV-2","ATCCGTGAGAAAATCA",3,32.1,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","T15L R73W Y178W",3
"lib2","SARS-CoV-2","ATCCGTGAGCACGACG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","N4* R25H E141F P161G",4
"lib2","SARS-CoV-2","ATCCGTGATAACCCAA",7,0.95,NA,NA,NA,NA,NA,NA,"stop","T46D N110* N157R",3
"lib2","SARS-CoV-2","ATCCGTGCATAATGTG",10,101.92,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T63N D90H D112A Y143M",4
"lib2","SARS-CoV-2","ATCCGTTAACACGGAT",2,93.77,10.43,-0.41,0.05,2.87,1.09,0,">1 nonsynonymous","E10G A18P D98L",3
"lib2","SARS-CoV-2","ATCCGTTAACGGGCCA",7,102.4,10.09,-0.75,0.06,2.77,1.03,0,">1 nonsynonymous","A33R N58A",2
"lib2","SARS-CoV-2","ATCCGTTACCAAAACT",1,0.65,NA,NA,NA,NA,NA,NA,"stop","A81* F99Y P149K P177L",4
"lib2","SARS-CoV-2","ATCCGTTAGTCATCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F47G N64D S147*",3
"lib2","SARS-CoV-2","ATCCGTTATTATACGT",2,5.52,6,-4.84,2,3,1,0,">1 nonsynonymous","T55A D97M D137T Y143G",4
"lib2","SARS-CoV-2","ATCCGTTCGTAATTTT",4,41.29,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","I2A G83T I142G T170Q",4
"lib2","SARS-CoV-2","ATCCGTTTAAAAGAAC",5,34.2,8.8,-2.03,0.23,1.5,1.06,0.03,">1 nonsynonymous","E10M W106G N171Y",3
"lib2","SARS-CoV-2","ATCCTAAAAACTTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50I Q84P P96R C158* Q168L",5
"lib2","SARS-CoV-2","ATCCTAAAACATGACA",1,29.25,10.95,0.12,0.06,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTAAAATCAAGTC",4,62.79,10.7,-0.13,0.04,2.91,1.11,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","ATCCTAAAATTTCGAA",4,7.4,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y21R A105D V181L",3
"lib2","SARS-CoV-2","ATCCTAAACAAATGGA",10,70.57,8.41,-2.42,0.33,1.5,1,0.04,">1 nonsynonymous","A81S R127M",2
"lib2","SARS-CoV-2","ATCCTAAACACGAGAA",7,63.51,10.08,-0.76,0.05,2.44,1.04,0,">1 nonsynonymous","A14T D90L T201W",3
"lib2","SARS-CoV-2","ATCCTAAAGCGCGACA",7,20.48,6.06,-4.77,0.48,3,1.13,0.01,">1 nonsynonymous","V77K S108P P149H S184D",4
"lib2","SARS-CoV-2","ATCCTAAATCTGTGCC",14,86.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D90S C102P L131E",3
"lib2","SARS-CoV-2","ATCCTAACAAGAGATA",15,1.8,NA,NA,NA,NA,NA,NA,"stop","L38N Y50* Y93V",3
"lib2","SARS-CoV-2","ATCCTAACAAGGTTCG",5,2.76,NA,NA,NA,NA,NA,NA,"stop","T15* S43K Y121D G155S",4
"lib2","SARS-CoV-2","ATCCTAACCGAAGGAC",1,18.73,10.94,0.1,0.08,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTAACTAAAAGCC",15,319.69,10.15,-0.69,0.03,2.92,1.02,0,">1 nonsynonymous","P161G L188S",2
"lib2","SARS-CoV-2","ATCCTAACTAATCTAT",9,155.81,10.28,-0.56,0.05,2.8,1.06,0,">1 nonsynonymous","G116L P149H",2
"lib2","SARS-CoV-2","ATCCTAACTGATGTGT",2,10.47,9.25,-1.59,0.2,1.88,1.05,0.02,">1 nonsynonymous","W23V K87L T201A",3
"lib2","SARS-CoV-2","ATCCTAACTGGGTTTA",1,7.91,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","L60N A81Y A89S N118F F160P F167N G172R",7
"lib2","SARS-CoV-2","ATCCTAAGGATAAGAT",9,52.27,6,-4.84,2,3,1.19,0,">1 nonsynonymous","K48E A67P N118S C150V",4
"lib2","SARS-CoV-2","ATCCTAAGTTTAATAG",2,7.85,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K94P C150R",2
"lib2","SARS-CoV-2","ATCCTAATTCAAATCA",6,131.59,9.48,-1.36,0.09,2.32,1.07,0,">1 nonsynonymous","S43C R78L T148P",3
"lib2","SARS-CoV-2","ATCCTAATTCTGAGCC",2,50.3,10.66,-0.17,0.05,2.92,1.08,0,">1 nonsynonymous","T55C T201G",2
"lib2","SARS-CoV-2","ATCCTAATTGACTTGA",3,0.5,NA,NA,NA,NA,NA,NA,"stop","S147* P191G",2
"lib2","SARS-CoV-2","ATCCTACAAATAGAAG",6,90.99,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G51Y V103F",2
"lib2","SARS-CoV-2","ATCCTACACAGTGAGC",2,10.09,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R25D K94R L183P",3
"lib2","SARS-CoV-2","ATCCTACACGATAAAA",8,82.86,9.6,-1.24,0.09,1.98,1.03,0,">1 nonsynonymous","T3K A42K D137I",3
"lib2","SARS-CoV-2","ATCCTACACTCTGAAA",1,5.65,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T15R R124I P133L",3
"lib2","SARS-CoV-2","ATCCTACCCTGGTGAC",9,110.25,8.74,-2.1,0.07,1.72,1.08,0,">1 nonsynonymous","Y66K K128E E135W",3
"lib2","SARS-CoV-2","ATCCTACCTGCGTAAG",6,50.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9V F47M I80M Y119L",4
"lib2","SARS-CoV-2","ATCCTACGCTTAATAA",14,174.61,9.02,-1.81,0.05,2.47,1.08,0,">1 nonsynonymous","V37L D112L K199Q",3
"lib2","SARS-CoV-2","ATCCTACTCCGACGAA",8,4.84,NA,NA,NA,NA,NA,NA,"stop","P7E S41* G83Y Y91R N107G S113W G152A",7
"lib2","SARS-CoV-2","ATCCTAGATTGTGTCG",2,7.59,8.69,-2.15,0.21,2.09,1.08,0.02,">1 nonsynonymous","N107I K199W",2
"lib2","SARS-CoV-2","ATCCTAGCCCCCGAAG",4,11.79,6,-4.84,2,1.5,1.1,0.04,"1 nonsynonymous","N92R",1
"lib2","SARS-CoV-2","ATCCTAGGCATCAATG",5,31.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y21R F47N N64S Q84Y A145L",5
"lib2","SARS-CoV-2","ATCCTAGGGAAGATAA",8,110.1,9.34,-1.5,0.04,2.9,1.09,0,">1 nonsynonymous","S113C T201N",2
"lib2","SARS-CoV-2","ATCCTAGTAGCAAGGG",3,67.73,9.63,-1.21,0.05,2.92,1.05,0,">1 nonsynonymous","C61A I104Y G116R T170S",4
"lib2","SARS-CoV-2","ATCCTAGTTGTACTTA",14,166.78,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5E R27E L38I R124G P149A",5
"lib2","SARS-CoV-2","ATCCTATAATGAATGA",5,141.98,10.24,-0.6,0.03,2.81,1.04,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","ATCCTATCCACCCAAC",6,1.46,NA,NA,NA,NA,NA,NA,"stop","P7* A42S T170K",3
"lib2","SARS-CoV-2","ATCCTATCGTACGCAA",6,5.05,NA,NA,NA,NA,NA,NA,"stop","K56* L95S A105D",3
"lib2","SARS-CoV-2","ATCCTATCTTCCTTTT",5,114.18,10.84,0.01,0.03,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTATTGTAACCCT",7,2.89,NA,NA,NA,NA,NA,NA,"stop","N110* R136S T148I F160A",4
"lib2","SARS-CoV-2","ATCCTCAATAAATACG",17,324.96,8.53,-2.31,0.07,2.88,1.05,0,">1 nonsynonymous","T3I Y39K N118K F156R",4
"lib2","SARS-CoV-2","ATCCTCACCATCTAAC",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S S41P T85S V103G",4
"lib2","SARS-CoV-2","ATCCTCACCTAAAAGG",17,247.56,10.66,-0.18,0.03,2.89,1.1,0,">1 nonsynonymous","K132S N151A",2
"lib2","SARS-CoV-2","ATCCTCAGAGGACACA",2,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86H T100S Y119R V153Y Y165L",5
"lib2","SARS-CoV-2","ATCCTCAGTACCTAGG",5,87.35,10.07,-0.76,0.06,2.57,1.02,0,">1 nonsynonymous","P133A V173S",2
"lib2","SARS-CoV-2","ATCCTCATAAATAACA",6,5.51,9.78,-1.05,0.13,2.14,1,0,">1 nonsynonymous","A42P F134M G152W",3
"lib2","SARS-CoV-2","ATCCTCCACAACCGAG",1,19.79,10.08,-0.76,0.08,2.78,1,0,">1 nonsynonymous","D59A D90S N120V",3
"lib2","SARS-CoV-2","ATCCTCCAGCTGATAA",13,30.68,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R A33V Y91V G116F N157L",5
"lib2","SARS-CoV-2","ATCCTCCAGTCAAGGG",3,79.06,10.6,-0.24,0.05,2.96,1.04,0,">1 nonsynonymous","T46V L60S V77L",3
"lib2","SARS-CoV-2","ATCCTCCTAATTCCCA",2,30,7.91,-2.93,0.22,1.5,1.01,0.02,"1 nonsynonymous","L162E",1
"lib2","SARS-CoV-2","ATCCTCCTGTCACTGA",2,45.08,10.77,-0.06,0.04,2.92,1.08,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","ATCCTCGACCGATTAA",7,74.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Q84A Y93W N118S E141C",4
"lib2","SARS-CoV-2","ATCCTCGCAAACAATT",3,21.74,10.24,-0.6,0.08,2.88,1.1,0,">1 nonsynonymous","A42P T55L Q144P G152N P197G",5
"lib2","SARS-CoV-2","ATCCTCGCCACAAGGA",1,21.34,10.31,-0.52,0.06,2.91,1.08,0.01,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","ATCCTCGCGACGTTCC",7,5.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T Y175I",2
"lib2","SARS-CoV-2","ATCCTCTACCGCTGGT",7,113.72,8.18,-2.66,0.13,2.08,1.02,0.01,">1 nonsynonymous","K56V Y119C E154F",3
"lib2","SARS-CoV-2","ATCCTCTTAGCAATCA",1,17.49,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","N58M F70N S113P I142M",4
"lib2","SARS-CoV-2","ATCCTCTTGAATTTTT",4,20.11,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I72T V103S",2
"lib2","SARS-CoV-2","ATCCTCTTTTCATCTT",7,23.4,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A33S K48A V77G L95M D112M L125I I142T P149T T201K",9
"lib2","SARS-CoV-2","ATCCTCTTTTGAACAC",9,109.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12V G86Y Y175S",3
"lib2","SARS-CoV-2","ATCCTGAATCAAAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37M S113* T140Q",3
"lib2","SARS-CoV-2","ATCCTGACCAGTAAAC",2,46.46,10.89,0.06,0.04,2.91,1.09,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","ATCCTGAGAACAAAAT",8,76.84,9.29,-1.55,0.08,1.78,1.06,0,">1 nonsynonymous","Y35G K94A D97K V115L L122F",5
"lib2","SARS-CoV-2","ATCCTGATTGGGACTG",6,63.99,9.49,-1.34,0.1,2.26,1.02,0,">1 nonsynonymous","T148F P161A G196R",3
"lib2","SARS-CoV-2","ATCCTGCAATCACCCT",3,61.78,10.8,-0.04,0.05,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCCTGCATTAAACCA",2,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5C T15F T85E S113Y",4
"lib2","SARS-CoV-2","ATCCTGCTGATAGAGA",9,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V V103N L162Y",3
"lib2","SARS-CoV-2","ATCCTGGATCTCGACA",1,22.91,9.89,-0.94,0.2,1.99,1.09,0.02,"1 nonsynonymous","W23A",1
"lib2","SARS-CoV-2","ATCCTGGATGAACCAG",8,85.03,10.83,-0.01,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTGGCCGCTCCGC",1,24.51,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15P L38S N64I C158T",4
"lib2","SARS-CoV-2","ATCCTGGCTAATCGAG",1,95.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2F D112C F156L Q176V",4
"lib2","SARS-CoV-2","ATCCTGGGACCCATTA",3,1.18,NA,NA,NA,NA,NA,NA,"stop","Y66L W106* L125Y Y175D",4
"lib2","SARS-CoV-2","ATCCTGGTGAACCGCG",4,99.4,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82S Y119L",2
"lib2","SARS-CoV-2","ATCCTGGTGTTTAGTT",1,16.92,6,-4.84,2,3,1.32,0.02,">1 nonsynonymous","Y35M N92T E186R",3
"lib2","SARS-CoV-2","ATCCTGTAAATAATCC",16,207.6,8.49,-2.34,0.1,2.37,1.1,0,">1 nonsynonymous","N13R V37S Y123K T148D Q168L",5
"lib2","SARS-CoV-2","ATCCTGTATAAAATTA",7,1.68,NA,NA,NA,NA,NA,NA,"stop","G9E F44* Y50H G172M",4
"lib2","SARS-CoV-2","ATCCTGTCTCTTATGA",2,14.33,9.75,-1.08,0.1,2.7,1,0.01,">1 nonsynonymous","T63M N107C",2
"lib2","SARS-CoV-2","ATCCTTAAACGACGTA",10,180.74,10.83,-0.01,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTTAAATAGTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","I2* F12P F99L A105M E154T",5
"lib2","SARS-CoV-2","ATCCTTAACGACCCAT",9,65.31,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N1P C49Y R127S Q176V",4
"lib2","SARS-CoV-2","ATCCTTAACGCGTGAA",9,128.2,9.01,-1.83,0.05,1.71,1.11,0,">1 nonsynonymous","A33R F44V G83Y S139D",4
"lib2","SARS-CoV-2","ATCCTTAAGGTGAAAT",3,8.77,10.22,-0.62,0.18,2.59,1,0.01,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","ATCCTTAAGTGCAAAA",2,16.03,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","T15C A89R R136Y L183Y L188E",5
"lib2","SARS-CoV-2","ATCCTTAATAGAGACG",5,60.95,10.84,0,0.15,2.73,1.05,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATCCTTAATGCCATAG",11,232.8,10.14,-0.69,0.04,2.75,1.05,0,">1 nonsynonymous","V65R T148I",2
"lib2","SARS-CoV-2","ATCCTTACACTCTTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S19* A105S",2
"lib2","SARS-CoV-2","ATCCTTACTGAACGAT",3,93.12,8.4,-2.43,0.13,2.76,1.12,0.01,"1 nonsynonymous","Y175C",1
"lib2","SARS-CoV-2","ATCCTTATAAGCCGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I K87S K94H W106R R127L I142T",6
"lib2","SARS-CoV-2","ATCCTTATAATATCGA",10,2.75,NA,NA,NA,NA,NA,NA,"stop","S45* P54D G83R K94A D112I S200Q",6
"lib2","SARS-CoV-2","ATCCTTATAGAAATAG",3,27.78,8.18,-2.66,0.1,2.1,1.07,0.01,">1 nonsynonymous","R78W I88M T170K",3
"lib2","SARS-CoV-2","ATCCTTATCACATATA",1,12.42,9.63,-1.21,0.22,2.1,1.3,0.01,"1 nonsynonymous","A14Y",1
"lib2","SARS-CoV-2","ATCCTTATGCTTTTTT",1,17.27,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","T55W T63F F167S",3
"lib2","SARS-CoV-2","ATCCTTCACATAGCAT",1,24.82,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N64Q I104R K128I G152C",4
"lib2","SARS-CoV-2","ATCCTTCACATTCATA",5,43.87,10.06,-0.77,0.05,2.93,1.07,0,"1 nonsynonymous","F156Q",1
"lib2","SARS-CoV-2","ATCCTTCAGCCGCTAA",3,12.49,10.82,-0.01,0.25,2.51,1,0.04,">1 nonsynonymous","V32S C61I",2
"lib2","SARS-CoV-2","ATCCTTCCACCACGGA",1,20.97,7.88,-2.96,0.3,1.5,1.13,0.04,"1 nonsynonymous","W106D",1
"lib2","SARS-CoV-2","ATCCTTCCATTGCGAA",14,137.81,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G9V S19M S113N V173S",4
"lib2","SARS-CoV-2","ATCCTTCCTAAGTCAG",4,93.24,10.05,-0.78,0.07,2.69,1.02,0,">1 nonsynonymous","A14V L60R",2
"lib2","SARS-CoV-2","ATCCTTCGTTACTCGC",1,34.18,6,-4.84,1.1,1.5,1.15,0.02,">1 nonsynonymous","F17W D98I A145L P177H",4
"lib2","SARS-CoV-2","ATCCTTGGCGCACGCC",19,138.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27K Y35D K94G D97M N120M F134L",6
"lib2","SARS-CoV-2","ATCCTTGTATATACCA",3,34.07,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y39L T63P G86R",3
"lib2","SARS-CoV-2","ATCCTTTAAGAAGAAA",1,6.19,10.48,-0.35,0.21,2.83,1.09,0.01,">1 nonsynonymous","N1L N120F",2
"lib2","SARS-CoV-2","ATCCTTTACGACGGTC",1,10.23,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","E10A G172W",2
"lib2","SARS-CoV-2","ATCCTTTCTTTCAAGA",5,39.85,8.78,-2.05,0.19,1.5,1.03,0.02,">1 nonsynonymous","C61G G86S",2
"lib2","SARS-CoV-2","ATCCTTTGAATGAAAC",2,10.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6A L60A D90E L111A N120K Q144P",6
"lib2","SARS-CoV-2","ATCCTTTTTATCTGGC",3,26.5,6.25,-4.59,0.83,1.5,1.22,0.03,">1 nonsynonymous","G83S N92K Y121W A145G P177F",5
"lib2","SARS-CoV-2","ATCGAAAAACTCTAAC",2,18.82,9.74,-1.09,0.17,1.83,1.02,0.02,">1 nonsynonymous","I2M Q84P",2
"lib2","SARS-CoV-2","ATCGAAAAACTTCTTA",6,0.57,NA,NA,NA,NA,NA,NA,"stop","N64Y E76* I142Y",3
"lib2","SARS-CoV-2","ATCGAAAACGAAGAAT",10,24.65,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","Y39I T85M P96L E154Y F160I",5
"lib2","SARS-CoV-2","ATCGAAAACTTTAATT",1,32.62,10.82,-0.02,0.06,2.84,1.15,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","ATCGAAAAGCCTTATA",1,49.68,8.95,-1.88,0.1,2.39,1.04,0,">1 nonsynonymous","Y35G C61N Y121K T201K",4
"lib2","SARS-CoV-2","ATCGAAAAGTTAACAC",11,178.7,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R27P F47L N58M L111R Y121I K198Q",6
"lib2","SARS-CoV-2","ATCGAAAATATGGCCA",11,53.75,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L5F W23C F62V P96G L183V",5
"lib2","SARS-CoV-2","ATCGAAACAAATCTTA",15,27.4,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","S45G G86Y P96C R124H K198A",5
"lib2","SARS-CoV-2","ATCGAAACAAATTGTG",3,38.76,7.19,-3.64,0.37,1.5,1.07,0.05,">1 nonsynonymous","G152N V153L R179V",3
"lib2","SARS-CoV-2","ATCGAAACAGACGTAT",6,106.45,8.3,-2.53,0.05,2.85,1.08,0,"1 nonsynonymous","S113I",1
"lib2","SARS-CoV-2","ATCGAAACGCCTATCG",4,33.62,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","G9L S69K G101H P169F V173A",5
"lib2","SARS-CoV-2","ATCGAAAGGACAAATA",8,40.16,6.44,-4.4,0.2,1.5,1.17,0,">1 nonsynonymous","I104K I138E G146L",3
"lib2","SARS-CoV-2","ATCGAAATAGAATATA",4,101.8,10.83,-0.01,0.07,2.92,1.09,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","ATCGAACAAAACAGCT",3,0.65,NA,NA,NA,NA,NA,NA,"stop","C6A C61*",2
"lib2","SARS-CoV-2","ATCGAACAAACCAGCG",3,5.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","ATCGAACAACGCAGTT",1,26.77,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","F12E A67N A81V Q144A",4
"lib2","SARS-CoV-2","ATCGAACACCTTCTTC",3,52.48,10.73,-0.11,0.03,2.92,1.06,0,">1 nonsynonymous","L5I K114E K132T",3
"lib2","SARS-CoV-2","ATCGAACACGCTAAGT",5,399.53,10.8,-0.03,0.03,2.95,1.06,0,">1 nonsynonymous","I2F D98N",2
"lib2","SARS-CoV-2","ATCGAACCAGTCTACA",2,35.5,10.27,-0.57,0.05,2.72,1.02,0,">1 nonsynonymous","F134L P149L E154K",3
"lib2","SARS-CoV-2","ATCGAACCATATGCTA",14,339.28,9.91,-0.93,0.06,2.18,1.04,0,">1 nonsynonymous","Y39S T46K F185L",3
"lib2","SARS-CoV-2","ATCGAACCGCAATAAA",3,42.58,10.33,-0.5,0.06,2.93,1.02,0,">1 nonsynonymous","L5S C61F D97V L122W V173I",5
"lib2","SARS-CoV-2","ATCGAACGATCTTGGA",24,149.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35V K87N N92V G101Q K198V",5
"lib2","SARS-CoV-2","ATCGAACTCACACTCA",6,89.35,10.25,-0.58,0.05,2.7,1.04,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","ATCGAACTTAACCGAA",4,61.58,10.82,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","S147Y",1
"lib2","SARS-CoV-2","ATCGAACTTCGTAAAT",1,1.11,NA,NA,NA,NA,NA,NA,"stop","S69* N118Y F134L",3
"lib2","SARS-CoV-2","ATCGAACTTGCATCAA",4,45.12,7.59,-3.24,0.19,1.5,1.07,0.01,">1 nonsynonymous","L131V S139P",2
"lib2","SARS-CoV-2","ATCGAAGGCTTCCAAA",2,48.72,10.82,-0.01,0.06,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCGAATACCAAAAAT",4,74.61,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S29P K48N G83D R124E V180Y S200C",6
"lib2","SARS-CoV-2","ATCGAATAGAAAGCCG",2,75.42,10.67,-0.16,0.05,2.93,1.09,0,"1 nonsynonymous","Y175F",1
"lib2","SARS-CoV-2","ATCGAATAGTAAGCAT",1,21.22,10.72,-0.11,0.07,2.81,1.21,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","ATCGAATGCACAAGGT",3,23.34,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V37P C49M",2
"lib2","SARS-CoV-2","ATCGACAAAAACAAAC",3,94.66,8.67,-2.16,0.08,2.83,1.02,0,">1 nonsynonymous","K56M N118P V173F",3
"lib2","SARS-CoV-2","ATCGACAAACATAAGG",5,72.17,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D68G V173S",2
"lib2","SARS-CoV-2","ATCGACAAACGATATA",7,49.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","R25M G117V K132G K198Q",4
"lib2","SARS-CoV-2","ATCGACACAAAATAAC",1,12.45,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83Y A105D",2
"lib2","SARS-CoV-2","ATCGACACATCCAAGG",10,72.91,8.84,-2,0.06,1.98,1.03,0,">1 nonsynonymous","W106V P149E G174P",3
"lib2","SARS-CoV-2","ATCGACACATTAGCCT",3,108.2,10.72,-0.12,0.02,2.97,1.03,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","ATCGACACTTACCGCG",15,20.32,6,-4.84,2,1.98,1.27,0.03,"1 nonsynonymous","V181P",1
"lib2","SARS-CoV-2","ATCGACAGCTTCACGG",8,33.66,8.84,-2,0.07,1.98,1.06,0,">1 nonsynonymous","C6G S41D S45V K128N",4
"lib2","SARS-CoV-2","ATCGACAGTATGTAAT",4,9.71,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L95A D98Y Y119T Y175M",4
"lib2","SARS-CoV-2","ATCGACATGAATTTAG",7,19.69,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","S19E I28R K48D G74A I80W G101M N110F",7
"lib2","SARS-CoV-2","ATCGACATGAATTTTA",14,140.32,9.84,-1,0.07,2.28,1.05,0,">1 nonsynonymous","I72M T100C",2
"lib2","SARS-CoV-2","ATCGACCAAGAGATTA",7,41.14,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N64R R73A Y93V G117I",4
"lib2","SARS-CoV-2","ATCGACCATACTAAAT",2,41.92,10.68,-0.15,0.05,2.92,1.09,0,">1 nonsynonymous","K48N D97S",2
"lib2","SARS-CoV-2","ATCGACCATGACATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* L122G",2
"lib2","SARS-CoV-2","ATCGACCGAGTGTTAA",9,133.71,10.01,-0.83,0.05,2.66,1,0,">1 nonsynonymous","N4P N107S S129R",3
"lib2","SARS-CoV-2","ATCGACCTCAACGACA",6,1084.6,10.82,-0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGACCTCTTTAAGT",10,19.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C49S K56G P96Y",3
"lib2","SARS-CoV-2","ATCGACCTTAATAGAG",19,243.34,10.91,0.08,0.06,2.89,1.11,0,">1 nonsynonymous","L122K Q163S",2
"lib2","SARS-CoV-2","ATCGACCTTCACTTTT",18,218.25,10.04,-0.8,0.05,2.65,1.01,0,">1 nonsynonymous","Y35K Q84G T100M",3
"lib2","SARS-CoV-2","ATCGACGCTTCTCCTA",10,25.12,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L38C N64I R124A I142Q C158A",5
"lib2","SARS-CoV-2","ATCGACGGTACCACAA",1,18.18,10.33,-0.5,0.1,2.72,1.1,0.01,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","ATCGACGTCTATCAGC",2,8.59,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","Q84L Y93I",2
"lib2","SARS-CoV-2","ATCGACTATTCGGCCC",10,5.11,NA,NA,NA,NA,NA,NA,"stop","C6* G101V",2
"lib2","SARS-CoV-2","ATCGACTGAAAATCGA",1,32.32,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","L131G I138T P161Y",3
"lib2","SARS-CoV-2","ATCGACTGAAGTCTAT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","F12S S29* C61I G83L G86S N110L",6
"lib2","SARS-CoV-2","ATCGACTGAGCAGCCG",1,13.45,10.17,-0.66,0.14,2.51,1,0.01,">1 nonsynonymous","L5P P54R I104S",3
"lib2","SARS-CoV-2","ATCGACTGCTTCCTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F C49S F99H C150S",4
"lib2","SARS-CoV-2","ATCGACTTCACCTTCT",7,100.43,9.74,-1.09,0.08,2.42,1,0,">1 nonsynonymous","I80V A89C V173N",3
"lib2","SARS-CoV-2","ATCGACTTGGAAATTT",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T Y93R P96H V173N",4
"lib2","SARS-CoV-2","ATCGAGAAATAACAGT",7,64.86,10.28,-0.55,0.04,2.9,1.08,0,">1 nonsynonymous","A22M A42R N58T P149Q",4
"lib2","SARS-CoV-2","ATCGAGAATTCTCCAA",2,21.26,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y50A P82M D97L N157F H189L",5
"lib2","SARS-CoV-2","ATCGAGACCACGCTCG",6,21.38,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","W23M F70I P96F W106L",4
"lib2","SARS-CoV-2","ATCGAGACGCCTTATT",7,1.4,NA,NA,NA,NA,NA,NA,"stop","E10A C49* W106E",3
"lib2","SARS-CoV-2","ATCGAGAGAGGTCACA",6,31.01,6.68,-4.16,0.52,1.5,1.06,0.04,">1 nonsynonymous","S41T D112K K132T N171F L187D",5
"lib2","SARS-CoV-2","ATCGAGAGCTAGAAGA",1,7.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C V103Y Y119A",3
"lib2","SARS-CoV-2","ATCGAGAGTTGTGTTT",11,85.35,10.89,0.05,0.06,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGAGATATAAGCCT",1,0.84,NA,NA,NA,NA,NA,NA,"stop","V65I V77E G146* G152F",4
"lib2","SARS-CoV-2","ATCGAGATATTGACAA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","Y39S C61L R73* K198N",4
"lib2","SARS-CoV-2","ATCGAGCAATAAAGAT",10,42.42,6.65,-4.19,0.54,1.5,1.28,0.04,">1 nonsynonymous","C6D A33E S45R W106K T201A",5
"lib2","SARS-CoV-2","ATCGAGGAAATATAAA",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57R D97S K114V G152F",4
"lib2","SARS-CoV-2","ATCGAGGATCCCAGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","K26V D90* E135D Y165R",4
"lib2","SARS-CoV-2","ATCGAGGGCATTACGG",2,26.35,10.91,0.08,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGAGTCAATAAAAT",6,59.56,7.26,-3.57,0.18,1.5,1.1,0.01,">1 nonsynonymous","I2Y I88F D97L",3
"lib2","SARS-CoV-2","ATCGAGTCATCTTTGC",1,10.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68R G86L A105E",3
"lib2","SARS-CoV-2","ATCGAGTGATCGTGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","I28* L131S",2
"lib2","SARS-CoV-2","ATCGAGTGCTATAATT",2,13.29,6.03,-4.81,0.32,3,1.09,0,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","ATCGAGTGTGTTTACT",4,16.45,9.9,-0.94,0.11,2.99,1.07,0.01,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","ATCGAGTTCTCCAATG",6,149.58,7.44,-3.4,0.14,1.5,1.08,0.01,">1 nonsynonymous","Y91R R127T F156V",3
"lib2","SARS-CoV-2","ATCGATAACCAGTGGT",1,12.55,10.84,0,0.1,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGATAAGTATCAAC",3,1.21,NA,NA,NA,NA,NA,NA,"stop","S41* T85A L183D",3
"lib2","SARS-CoV-2","ATCGATAATACTAAGT",9,164.45,10.87,0.03,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGATACAACGCATC",3,102.65,10.06,-0.78,0.03,2.88,1.03,0,">1 nonsynonymous","C6N G152K",2
"lib2","SARS-CoV-2","ATCGATACGAACAATA",2,58.94,10.53,-0.31,0.06,2.98,1.04,0,">1 nonsynonymous","D75S K87A",2
"lib2","SARS-CoV-2","ATCGATACTCACATCG",4,88.11,6.61,-4.23,0.2,1.5,1.15,0.01,">1 nonsynonymous","E10G V37G F44G Q84L N130D",5
"lib2","SARS-CoV-2","ATCGATAGAAAAATTG",4,36.56,10.2,-0.64,0.04,2.92,1.07,0,">1 nonsynonymous","N118M V153R",2
"lib2","SARS-CoV-2","ATCGATAGAGAGTAAG",11,101.19,10.92,0.09,0.08,2.89,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCGATATATTAGTCC",3,52.88,10.01,-0.83,0.07,2.34,1.01,0,">1 nonsynonymous","I2Y N13Y D90M",3
"lib2","SARS-CoV-2","ATCGATATCCAAGATA",11,55.92,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3L G74F K132I F156T",4
"lib2","SARS-CoV-2","ATCGATATTTTATCAC",7,103.11,6.57,-4.26,0.3,1.5,1.12,0.01,">1 nonsynonymous","L38H W106N",2
"lib2","SARS-CoV-2","ATCGATCGAGACTACC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W Y123K",2
"lib2","SARS-CoV-2","ATCGATCTATGACACC",7,61.83,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14D N24I K56T L122N K132N Q168D",6
"lib2","SARS-CoV-2","ATCGATCTGAGTAAAT",7,147.12,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","C31V S69R S113T Y175M",4
"lib2","SARS-CoV-2","ATCGATGAAGTTTTAT",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100N T201S",2
"lib2","SARS-CoV-2","ATCGATGACTAGTATA",4,28.71,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5K F99Q K132L",3
"lib2","SARS-CoV-2","ATCGATTAAAGGTATA",1,7.86,8.39,-2.45,0.19,1.69,1.06,0.02,">1 nonsynonymous","E10G K56Q T63E K94G E186D",5
"lib2","SARS-CoV-2","ATCGATTCTACTATCA",26,387.43,10.82,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGATTGATTCCAGC",5,52.95,10.62,-0.21,0.04,3,1.03,0,">1 nonsynonymous","Y66W E141V",2
"lib2","SARS-CoV-2","ATCGATTTGGGGACTT",30,506.1,8.17,-2.67,0.13,1.84,1.08,0.01,">1 nonsynonymous","F156M F167L",2
"lib2","SARS-CoV-2","ATCGCAAAACTTTACA",3,79.35,10.64,-0.2,0.05,2.95,1.06,0,">1 nonsynonymous","A22E C61L",2
"lib2","SARS-CoV-2","ATCGCAAAAGCTGACA",4,81.7,10.71,-0.13,0.02,2.98,1.03,0,">1 nonsynonymous","T85N G116P",2
"lib2","SARS-CoV-2","ATCGCAAACTATTCAG",8,86.79,10.28,-0.56,0.04,2.9,1.03,0,">1 nonsynonymous","G9L H189F",2
"lib2","SARS-CoV-2","ATCGCAAAGATTACTT",1,26.82,10.16,-0.68,0.14,2.31,1.19,0.01,">1 nonsynonymous","N13S A18E",2
"lib2","SARS-CoV-2","ATCGCAAAGCTAGAAT",13,202.45,9.98,-0.86,0.03,2.92,1.06,0,">1 nonsynonymous","V37F G83H I142S",3
"lib2","SARS-CoV-2","ATCGCAAATGATAGAA",7,44.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96N S139I V173A",3
"lib2","SARS-CoV-2","ATCGCAACCGGTAAAG",3,35.45,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5K C6S K26N V37K F44V Q144C",6
"lib2","SARS-CoV-2","ATCGCAACCTTCGTAC",1,34.96,9.14,-1.69,0.1,2.32,1.08,0.01,">1 nonsynonymous","N4V G146Y V153N",3
"lib2","SARS-CoV-2","ATCGCAATAACACATG",3,80.85,10.73,-0.1,0.04,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGCAATGTAAACCC",6,10.15,6,-4.84,2,3,1.11,0.02,">1 nonsynonymous","T3E A33E D34Y L60D S139G Q144M",6
"lib2","SARS-CoV-2","ATCGCAATGTAATCTT",5,0.74,NA,NA,NA,NA,NA,NA,"stop","A14V C49V E141F Q163L P197*",5
"lib2","SARS-CoV-2","ATCGCAATTCACGTTA",3,77.38,9.28,-1.56,0.05,2.94,1.08,0,">1 nonsynonymous","V37F T63F Y119L",3
"lib2","SARS-CoV-2","ATCGCACATGTTCAAA",5,5.37,NA,NA,NA,NA,NA,NA,"stop","F62* G116V N157Y",3
"lib2","SARS-CoV-2","ATCGCACCCCGAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7G A22V L57V K87* T100K",5
"lib2","SARS-CoV-2","ATCGCACTTGACAACC",1,6.81,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D90M A105R L122M Q144E F156S T201V",6
"lib2","SARS-CoV-2","ATCGCAGAAAATCTAG",14,181.27,10.68,-0.16,0.03,2.99,1.02,0,"1 nonsynonymous","K87H",1
"lib2","SARS-CoV-2","ATCGCAGAACCCGTTT",6,69.69,10.1,-0.74,0.05,2.71,1.04,0,">1 nonsynonymous","D59V D97Y",2
"lib2","SARS-CoV-2","ATCGCAGTCTTCAATG",2,19.81,9.97,-0.86,0.21,1.5,1.04,0.06,">1 nonsynonymous","A105R F160Y",2
"lib2","SARS-CoV-2","ATCGCAGTTTCCCGCC",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24L D137Q",2
"lib2","SARS-CoV-2","ATCGCATACTAACCTC",14,250.42,9.95,-0.89,0.04,2.89,1.1,0,">1 nonsynonymous","L122S T170R",2
"lib2","SARS-CoV-2","ATCGCATAGCCAACGT",2,35.37,10.95,0.11,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGCATATAAACGAA",14,333.6,10.58,-0.26,0.03,2.92,1.05,0,">1 nonsynonymous","G9V E10D",2
"lib2","SARS-CoV-2","ATCGCATATAACCTTC",6,63.7,9.37,-1.47,0.12,1.68,1.1,0.01,">1 nonsynonymous","A33M V37N G51F T85I",4
"lib2","SARS-CoV-2","ATCGCATATTCTATAA",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y N107F F167R Q176L",4
"lib2","SARS-CoV-2","ATCGCATCCTGAAGTC",6,65.37,8.16,-2.68,0.16,2.4,1.08,0.01,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","ATCGCATCGCCCTAGT",1,17.17,10.2,-0.63,0.08,2.85,1,0,">1 nonsynonymous","P7Y S36L",2
"lib2","SARS-CoV-2","ATCGCATGTAGACACT",3,64.23,10.04,-0.8,0.05,2.83,1.02,0,">1 nonsynonymous","C61K N109I V153C",3
"lib2","SARS-CoV-2","ATCGCATTAATAACGC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","N13K D90S E186* A192E",4
"lib2","SARS-CoV-2","ATCGCCAGCCAATAAC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","K114* L122S V153M",3
"lib2","SARS-CoV-2","ATCGCCATGCCAGCAT",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16D Y175S",2
"lib2","SARS-CoV-2","ATCGCCATGTACTTGG",2,36.18,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","C6Y F8I V65N L122P L131I",5
"lib2","SARS-CoV-2","ATCGCCCCGATCTAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62A E76N D137R G155D",4
"lib2","SARS-CoV-2","ATCGCCCCGTATCAAA",2,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66W F134N",2
"lib2","SARS-CoV-2","ATCGCCCCTGACTTGG",6,86.99,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S108Y G116Y C158E K198L",4
"lib2","SARS-CoV-2","ATCGCCCGAGGATGCC",3,80.62,8.36,-2.48,0.12,2.08,1.14,0,">1 nonsynonymous","A89P L95M L125G F160L",4
"lib2","SARS-CoV-2","ATCGCCCGCACGAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","T55K L122*",2
"lib2","SARS-CoV-2","ATCGCCCTAAAGTAAT",3,173.41,10.46,-0.38,0.04,2.91,1.05,0,"1 nonsynonymous","I104T",1
"lib2","SARS-CoV-2","ATCGCCCTTTCGAATC",3,96.07,9.78,-1.06,0.06,2.83,1.04,0,">1 nonsynonymous","T100I W106M F156K",3
"lib2","SARS-CoV-2","ATCGCCGACATATATT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","R16K N24W T55H G86D A89F F160*",6
"lib2","SARS-CoV-2","ATCGCCGAGAGACCCC",3,23.78,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6V R16I F70K A81K G86V C150K",6
"lib2","SARS-CoV-2","ATCGCCGCTCTCCTGT",2,299.37,10.16,-0.67,0.02,3,1.01,0,">1 nonsynonymous","F156S L187N",2
"lib2","SARS-CoV-2","ATCGCCGGTCTCAGAA",2,7.22,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","S45C S53L S113W E154S",4
"lib2","SARS-CoV-2","ATCGCCTTCCAAATAA",3,66.54,7.04,-3.79,0.22,1.5,1.16,0.01,">1 nonsynonymous","Q79R N107S Y123L",3
"lib2","SARS-CoV-2","ATCGCGAAAACATACG",1,1.99,NA,NA,NA,NA,NA,NA,"stop","T85R Q144* Q176W",3
"lib2","SARS-CoV-2","ATCGCGAAATTAGTAG",7,58.06,6,-4.84,1.36,2.33,1.22,0.01,">1 nonsynonymous","P149L V173H Y178G T201R",4
"lib2","SARS-CoV-2","ATCGCGAAGGAAAAGC",4,33.36,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","W23R Y119T K132Q",3
"lib2","SARS-CoV-2","ATCGCGAGAACCGGGT",3,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C S164R",2
"lib2","SARS-CoV-2","ATCGCGAGGACCGATA",5,28,10.45,-0.38,0.04,2.85,1.08,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","ATCGCGCCAACAAATT",6,40.07,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","I88Y",1
"lib2","SARS-CoV-2","ATCGCGCCTCAAAGCA",9,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R D90Y L131I E154I",4
"lib2","SARS-CoV-2","ATCGCGCCTTCCACGC",5,71.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N1R S36P G86V N92G S200R",5
"lib2","SARS-CoV-2","ATCGCGCTCCCCACGC",11,131.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T15S S69G G101I T148V Q168G",5
"lib2","SARS-CoV-2","ATCGCGTACAAGATAC",4,149.26,10.9,0.06,0.04,2.94,1.08,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","ATCGCGTGCACAATCA",14,132.23,9.69,-1.14,0.06,2.07,1.03,0,">1 nonsynonymous","T3N N40M Y50H F134Y K199S",5
"lib2","SARS-CoV-2","ATCGCGTTCCAGCTTC",3,46.97,10.64,-0.2,0.05,2.97,1.04,0,">1 nonsynonymous","N1V T85A",2
"lib2","SARS-CoV-2","ATCGCTAAAAGTACGA",1,24.54,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A81M G86I Q163R",3
"lib2","SARS-CoV-2","ATCGCTAAGAGAAGGT",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T A33M Q144Y C158Y T170F",5
"lib2","SARS-CoV-2","ATCGCTAATAACGCAT",6,102.01,6,-4.84,1.47,1.5,1.16,0.01,">1 nonsynonymous","A14S S36G S139G R179S",4
"lib2","SARS-CoV-2","ATCGCTATTGGCACCA",2,9.53,9.95,-0.88,0.36,1.5,1,0.06,">1 nonsynonymous","W106N Q163L",2
"lib2","SARS-CoV-2","ATCGCTCAATAACACT",6,92.74,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F17M L60Q D90S T100P Y119S R127M K199N",7
"lib2","SARS-CoV-2","ATCGCTCTACCCATCC",7,109.5,6,-4.84,1.82,1.68,1.28,0.01,">1 nonsynonymous","Y35W C102W D112T S129L P191L",5
"lib2","SARS-CoV-2","ATCGCTGACAAACAAG",6,33.39,7.78,-3.05,0.33,1.5,1.05,0.05,">1 nonsynonymous","C49N T85V T100S Y143C",4
"lib2","SARS-CoV-2","ATCGCTGATTTTAACT",6,123.14,10.07,-0.76,0.05,2.85,1.04,0,">1 nonsynonymous","G9P A14V",2
"lib2","SARS-CoV-2","ATCGCTGGGACCCGAT",4,119.6,10.81,-0.03,0.06,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGCTGTGAATTTGC",8,33.52,10.82,-0.02,0.07,2.93,1.09,0,">1 nonsynonymous","T3P C61V",2
"lib2","SARS-CoV-2","ATCGCTTCACAGCTAA",6,20.26,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A81T I104R",2
"lib2","SARS-CoV-2","ATCGCTTCATTAATCG",4,5.52,9.05,-1.78,0.23,1.98,1,0.03,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","ATCGCTTGAAAACAGT",10,178.46,10.11,-0.73,0.07,2.73,1,0,">1 nonsynonymous","V37K F44Y L60S G83M V173K A190F",6
"lib2","SARS-CoV-2","ATCGCTTGCACTACAT",8,17.69,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S41L A42T L95R V115M",4
"lib2","SARS-CoV-2","ATCGGAAAATACCCCG",7,0.45,NA,NA,NA,NA,NA,NA,"stop","S129L E135* V173S Y178I",4
"lib2","SARS-CoV-2","ATCGGAAACACCCCTT",4,35.61,6.63,-4.21,0.64,1.5,1.11,0.07,">1 nonsynonymous","F70E Y91S",2
"lib2","SARS-CoV-2","ATCGGAAAGCAAAATT",4,1.67,NA,NA,NA,NA,NA,NA,"stop","V37D T63* K87N P161A",4
"lib2","SARS-CoV-2","ATCGGAAAGTCCAATG",19,123.36,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A22T I88S",2
"lib2","SARS-CoV-2","ATCGGAACAAACAATC",2,40.17,10.22,-0.61,0.13,2.67,1.01,0.01,">1 nonsynonymous","G51E L60M",2
"lib2","SARS-CoV-2","ATCGGAAGGTAAATTG",2,63.19,10.18,-0.66,0.06,2.94,1,0,"1 nonsynonymous","Q168T",1
"lib2","SARS-CoV-2","ATCGGAATTAAACCTC",8,283.96,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","Y143P",1
"lib2","SARS-CoV-2","ATCGGACAATTAAATA",4,68.62,9.86,-0.98,0.05,2.98,1.03,0,">1 nonsynonymous","K56Q Y119K",2
"lib2","SARS-CoV-2","ATCGGACAATTCAACT",2,84.49,10.76,-0.08,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGACACATATTAG",6,26.34,6,-4.84,1.53,1.5,1.18,0.02,">1 nonsynonymous","Y91V E141Y Q176K",3
"lib2","SARS-CoV-2","ATCGGACGATGATTGG",1,54.34,10.76,-0.07,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGACGTCCTATTA",2,8.24,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","F8N Y93R T140K",3
"lib2","SARS-CoV-2","ATCGGACTGTCACTAA",3,7.31,9.4,-1.44,0.32,1.88,1.04,0.04,">1 nonsynonymous","T15D V77R Q163H T201R",4
"lib2","SARS-CoV-2","ATCGGACTTCACGAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6F T85H C195*",3
"lib2","SARS-CoV-2","ATCGGAGAGACAAGGC",9,1.17,NA,NA,NA,NA,NA,NA,"stop","G83* V103T K199L",3
"lib2","SARS-CoV-2","ATCGGAGAGTCTGCTT",3,12.38,7.37,-3.46,0.35,1.5,1,0.02,">1 nonsynonymous","Y91L F134C P169C",3
"lib2","SARS-CoV-2","ATCGGAGATGTATTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L N64H D137W P149T",4
"lib2","SARS-CoV-2","ATCGGAGCGTGACATT",1,52.93,10.82,-0.02,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGATCTTCTCTAT",3,30.5,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","N13E F44K Y66T C150A",4
"lib2","SARS-CoV-2","ATCGGATGCATTGCAA",3,47.64,6.07,-4.77,1.09,1.5,1.19,0.02,">1 nonsynonymous","T3R Y93I Q176L",3
"lib2","SARS-CoV-2","ATCGGATGTCACAGTA",5,84.21,7.17,-3.67,0.14,1.68,1.07,0.01,"1 nonsynonymous","Y159E",1
"lib2","SARS-CoV-2","ATCGGATTAGCTAAAA",3,26.32,9.35,-1.48,0.15,1.73,1.05,0.01,">1 nonsynonymous","A14V L38R",2
"lib2","SARS-CoV-2","ATCGGATTCAAACGTT",3,44.36,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35K G86D R179K",3
"lib2","SARS-CoV-2","ATCGGATTCATAGGTA",3,11.12,6.68,-4.16,0.75,1.5,1.16,0.07,">1 nonsynonymous","C49Q V103G S129M T148E",4
"lib2","SARS-CoV-2","ATCGGCAATTGCAAAT",4,72.95,9.4,-1.43,0.09,1.79,1.11,0,">1 nonsynonymous","T85Q W106C T201V",3
"lib2","SARS-CoV-2","ATCGGCATAAATCCCA",9,116.24,10.83,-0.01,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGCATGCAACGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* G83I P149I",3
"lib2","SARS-CoV-2","ATCGGCCACTATTTCT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y V20A I88V N118V L125R G166V",6
"lib2","SARS-CoV-2","ATCGGCCATTATCACT",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R K56M",2
"lib2","SARS-CoV-2","ATCGGCGATCATAGCT",2,20.76,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V103C L162V G174A",3
"lib2","SARS-CoV-2","ATCGGCGTCCGTCAAG",2,37.69,10.9,0.06,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGCTAAAGACTTA",5,85.41,9.95,-0.89,0.07,2.42,1.1,0,"1 nonsynonymous","V11A",1
"lib2","SARS-CoV-2","ATCGGCTAAAGCCTAA",5,75.17,10.93,0.09,0.04,2.98,1.03,0,"1 nonsynonymous","P197A",1
"lib2","SARS-CoV-2","ATCGGCTCGACGATAT",6,35.54,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S19L A67H R179M",3
"lib2","SARS-CoV-2","ATCGGCTGCAAATGAG",5,42.83,10.77,-0.07,0.05,2.95,1.04,0,">1 nonsynonymous","R27P Y35L V173D",3
"lib2","SARS-CoV-2","ATCGGCTTATCTCAGT",7,21.95,6.18,-4.66,0.29,3,1.09,0,">1 nonsynonymous","S43V D59V D90M Q144L",4
"lib2","SARS-CoV-2","ATCGGCTTTACACATA",7,79.54,8.08,-2.76,0.14,1.99,1.08,0.01,"1 nonsynonymous","Y165P",1
"lib2","SARS-CoV-2","ATCGGGAATACGTGGA",2,43.27,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","N13V L60R E76L C150F N157L",5
"lib2","SARS-CoV-2","ATCGGGATAATCGTAG",4,23.62,10.43,-0.4,0.07,2.9,1.05,0,">1 nonsynonymous","T15H T63S Q84V",3
"lib2","SARS-CoV-2","ATCGGGCTCTACAAAC",4,68.58,10.75,-0.09,0.04,2.94,1.09,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","ATCGGGGCAGCCTTAG",1,45.64,9.13,-1.7,0.18,1.55,1.08,0.01,">1 nonsynonymous","D68E K198H",2
"lib2","SARS-CoV-2","ATCGGGTACATGCGTA",6,103.02,10.4,-0.43,0.07,2.71,1.04,0,">1 nonsynonymous","S41N C61W P96N Q163Y A192T K198L",6
"lib2","SARS-CoV-2","ATCGGGTACCCCACGA",4,78.28,10.85,0.01,0.07,2.9,1.1,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","ATCGGTAACAAGAGGA",10,424.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25G T63P G146S F167S Q176P",5
"lib2","SARS-CoV-2","ATCGGTAATTCGCACT",1,11.93,6,-4.84,0.76,3,1.06,0.01,">1 nonsynonymous","K56H Y66Q K87S P96L",4
"lib2","SARS-CoV-2","ATCGGTACAAAATTAC",2,29.09,10.53,-0.31,0.23,2.62,1.15,0.02,">1 nonsynonymous","Q84M K199S",2
"lib2","SARS-CoV-2","ATCGGTACAAGTAGTA",2,59.5,9.52,-1.32,0.04,2.89,1.07,0,">1 nonsynonymous","S43F L125P N151S",3
"lib2","SARS-CoV-2","ATCGGTACCGTTTACC",5,93.04,10.45,-0.39,0.05,2.92,1.06,0,"1 nonsynonymous","L38W",1
"lib2","SARS-CoV-2","ATCGGTAGCAACTGTC",10,121.78,10.85,0.02,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGGTAGTACACGAT",3,108.14,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N13Y Y175K",2
"lib2","SARS-CoV-2","ATCGGTATATACTCAT",7,133.74,8.56,-2.28,0.08,2.57,1.05,0,">1 nonsynonymous","Q84L G146E",2
"lib2","SARS-CoV-2","ATCGGTATTACAGCTT",1,37.66,10.52,-0.32,0.05,3,1,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","ATCGGTCAATAAACGA",1,31.65,10.2,-0.63,0.05,2.88,1,0,">1 nonsynonymous","Q84K R136V",2
"lib2","SARS-CoV-2","ATCGGTCAGGATAAAG",2,41.64,10.7,-0.13,0.12,2.65,1.28,0,">1 nonsynonymous","N24K Q168W",2
"lib2","SARS-CoV-2","ATCGGTCCCCTTTCTA",7,15,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Q84R V103P S139L",3
"lib2","SARS-CoV-2","ATCGGTCTGCTAAAAG",1,30.66,10.12,-0.71,0.08,2.53,1.04,0,">1 nonsynonymous","N64Y A81V S164T P191H",4
"lib2","SARS-CoV-2","ATCGGTGAGAGCCTTA",12,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y L122V S139L T148M",4
"lib2","SARS-CoV-2","ATCGGTGAGGATGGAG",3,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A T55M Y91S Y123C T148S V153S L183E",7
"lib2","SARS-CoV-2","ATCGGTGCAATAACCT",1,16.34,9.32,-1.52,0.24,1.5,1,0.03,">1 nonsynonymous","S36Y E76K S164A",3
"lib2","SARS-CoV-2","ATCGGTGCCGCACCCG",4,87.83,9.6,-1.24,0.05,2.96,1.05,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","ATCGGTGCGTTTGCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113P K128I P133S T148V Q163W",5
"lib2","SARS-CoV-2","ATCGGTGCTAGTAAGC",4,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M S69R G101R T148R",4
"lib2","SARS-CoV-2","ATCGGTTATATGCGAA",3,47.29,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F99T K128N P177R",3
"lib2","SARS-CoV-2","ATCGGTTCTGGTCCCA",2,16.59,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","G74W A89R D112L",3
"lib2","SARS-CoV-2","ATCGTAAAGATAACTA",1,15.02,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T55L D97E I142G G152D F156C",5
"lib2","SARS-CoV-2","ATCGTAACAGGCCAGC",11,95.74,8.81,-2.03,0.08,2.89,1.11,0,">1 nonsynonymous","C61P G117P",2
"lib2","SARS-CoV-2","ATCGTAACCTTCCGCC",1,0.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","ATCGTAACTTCAAGTA",4,0.29,NA,NA,NA,NA,NA,NA,"stop","E10D V103*",2
"lib2","SARS-CoV-2","ATCGTAACTTTAATCA",1,10.64,10.68,-0.15,0.09,2.86,1.19,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATCGTAAGAACACCAA",1,22.91,6,-4.84,2,3,1.05,0,">1 nonsynonymous","E10W A105L F134M E154R",4
"lib2","SARS-CoV-2","ATCGTAATATTAAAAG",4,10.87,10.19,-0.64,0.1,2.78,1.16,0.01,">1 nonsynonymous","N4S S41L I104T",3
"lib2","SARS-CoV-2","ATCGTAATCGGGCGGG",3,94.07,10,-0.84,0.1,2.18,1.03,0,">1 nonsynonymous","S43K C49V T63N E154S",4
"lib2","SARS-CoV-2","ATCGTAATCTACCATA",8,19.47,7.23,-3.6,0.4,1.5,1.19,0.07,">1 nonsynonymous","A14S V37T C49Y",3
"lib2","SARS-CoV-2","ATCGTAATGGTCGCCA",6,164.84,10.72,-0.11,0.04,2.95,1.07,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","ATCGTAATTCACCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","ATCGTACAGTAGGAAC",4,110.54,10.63,-0.21,0.03,2.95,1.06,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","ATCGTACCCATGTACA",7,1.78,NA,NA,NA,NA,NA,NA,"stop","S53W C61S V77R G86A Y93* F99V T100N Y119R C150F",9
"lib2","SARS-CoV-2","ATCGTACCCTGTGGTC",10,273.09,9.9,-0.94,0.02,2.8,1.09,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","ATCGTACGAAATTATT",1,29.82,10.5,-0.33,0.15,2.78,1.01,0.01,"1 nonsynonymous","N24I",1
"lib2","SARS-CoV-2","ATCGTACGGATTTCTA",8,88.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F62M L131G C158N R179V",4
"lib2","SARS-CoV-2","ATCGTACTACAGACTA",24,120.99,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A33R V71P P82V R179W",4
"lib2","SARS-CoV-2","ATCGTACTGGCTACGT",4,121.46,10.82,-0.01,0.03,2.96,1.03,0,">1 nonsynonymous","T63K Q168F",2
"lib2","SARS-CoV-2","ATCGTACTTAATCTCT",7,69.1,9.99,-0.84,0.09,2.39,1.03,0,">1 nonsynonymous","T55I D97M I104T",3
"lib2","SARS-CoV-2","ATCGTAGCCCAACTGA",4,66.85,9.85,-0.98,0.08,2.4,1.07,0,">1 nonsynonymous","Y35M S139W",2
"lib2","SARS-CoV-2","ATCGTAGTGAGGGCGA",6,113,10.79,-0.05,0.05,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCGTATAATCATGAA",5,21.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88F K132T I138C",3
"lib2","SARS-CoV-2","ATCGTATCTGTGCAGC",8,26.27,6,-4.84,1.63,3,1.11,0,">1 nonsynonymous","K56S V77Q K87G G101C",4
"lib2","SARS-CoV-2","ATCGTATTACAACGTG",6,49.94,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N92R T201M",2
"lib2","SARS-CoV-2","ATCGTATTACAAGCAA",11,0.27,NA,NA,NA,NA,NA,NA,"stop","Y35H T63* K114V A192T",4
"lib2","SARS-CoV-2","ATCGTCAACAAACAAA",2,5.91,8.56,-2.27,0.35,1.84,1.17,0.05,">1 nonsynonymous","Q79W G166Q",2
"lib2","SARS-CoV-2","ATCGTCAGAAAAATAA",2,14.15,9.88,-0.95,0.36,1.6,1.09,0.04,">1 nonsynonymous","R16K Y35P G51V N120E",4
"lib2","SARS-CoV-2","ATCGTCAGGAGAATCA",1,3.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","ATCGTCATAGTAAACT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5C I28* S41F I104V Y119H G166V",6
"lib2","SARS-CoV-2","ATCGTCCCCCTCCAGT",4,129.67,9.27,-1.57,0.09,2.01,1.09,0,">1 nonsynonymous","Y121M V173S",2
"lib2","SARS-CoV-2","ATCGTCCGAAATAAAC",5,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L R124T",2
"lib2","SARS-CoV-2","ATCGTCCGTGATCGTA",6,51.4,8.73,-2.1,0.07,2.77,1.14,0,">1 nonsynonymous","E10L T100V Y119T E154I",4
"lib2","SARS-CoV-2","ATCGTCCTCACAATCT",9,91.84,8.15,-2.69,0.1,1.69,1.07,0,">1 nonsynonymous","N130W Q176K",2
"lib2","SARS-CoV-2","ATCGTCGCAGCGAAAA",5,55.87,10.73,-0.1,0.04,2.94,1.09,0,">1 nonsynonymous","T3D K26R C61R N130T",4
"lib2","SARS-CoV-2","ATCGTCTGCCGGCATT",5,0,NA,NA,NA,NA,NA,NA,"stop","A22W N130*",2
"lib2","SARS-CoV-2","ATCGTCTTGTGAAACA",8,161.09,10.7,-0.14,0.02,2.94,1.09,0,">1 nonsynonymous","N4K V37S R78F",3
"lib2","SARS-CoV-2","ATCGTCTTGTTTCGGT",13,147.46,10.86,0.02,0.08,2.84,1.17,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","ATCGTGAGTTTAATAA",2,36.22,10.16,-0.68,0.1,2.71,1.05,0.01,">1 nonsynonymous","K56C E135S",2
"lib2","SARS-CoV-2","ATCGTGGCTCGTTCCC",9,100.05,10.71,-0.13,0.06,2.94,1.09,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","ATCGTGTTAAAAGTTC",6,163.15,10.73,-0.11,0.04,2.86,1.09,0,">1 nonsynonymous","I2K E10Q",2
"lib2","SARS-CoV-2","ATCGTTAGAACTGTAT",2,7.57,10.65,-0.19,0.12,3,1.02,0.01,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","ATCGTTATAAGGTAAA",1,73.92,10.22,-0.62,0.06,2.59,1.01,0,">1 nonsynonymous","Y39K C102L",2
"lib2","SARS-CoV-2","ATCGTTCAAATTAGAA",1,15.73,10.16,-0.68,0.17,2.36,1.16,0.01,">1 nonsynonymous","F17M R73K N130Q",3
"lib2","SARS-CoV-2","ATCGTTCAGGGCTCAC",13,98.01,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","W23D P82E",2
"lib2","SARS-CoV-2","ATCGTTCGGCATAACT",13,95.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6V N107V R136M R179K",4
"lib2","SARS-CoV-2","ATCGTTCTACATGAAC",17,4.88,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","ATCGTTCTTTAGAACC",4,77.39,9.85,-0.99,0.05,2.9,1.07,0,">1 nonsynonymous","T55S Y119K",2
"lib2","SARS-CoV-2","ATCGTTGACCACGACG",4,22.25,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G101S R124E",2
"lib2","SARS-CoV-2","ATCGTTGCGCCAGAAC",6,117.87,9.32,-1.52,0.05,2.7,1.04,0,">1 nonsynonymous","S19P K87M F160V",3
"lib2","SARS-CoV-2","ATCGTTGTCAAAGGTC",1,29.08,8.03,-2.81,0.38,1.87,1.13,0.01,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","ATCGTTTACAATCAAC",3,58.4,6,-4.84,1.64,1.5,1.22,0.02,">1 nonsynonymous","P7K Y39I P82L G152S",4
"lib2","SARS-CoV-2","ATCGTTTACTGTGTAG",7,40.31,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G86R V180C",2
"lib2","SARS-CoV-2","ATCGTTTCATAAAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","ATCGTTTCCGATCATG",6,11.21,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6L A22K V65Y G116L I138R P149L",6
"lib2","SARS-CoV-2","ATCGTTTGAGTTCATA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","Y66V A89W N118I N130T I138* G172I",6
"lib2","SARS-CoV-2","ATCGTTTGCAACTGCT",17,334.93,10.17,-0.67,0.05,2.59,1.04,0,">1 nonsynonymous","T3I D34Q S129T",3
"lib2","SARS-CoV-2","ATCGTTTGCCATGTGC",3,7.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30A C61S G86W Y119L Q168S G174L",6
"lib2","SARS-CoV-2","ATCGTTTTATTGAAAT",4,110.74,10.47,-0.37,0.05,2.9,1.04,0,">1 nonsynonymous","K48T T100W",2
"lib2","SARS-CoV-2","ATCGTTTTGAGAACTT",2,29.99,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A14N C31G S45P D59C N107W N171A",6
"lib2","SARS-CoV-2","ATCTAAAAAACTACTA",7,80.53,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","K56M A67N D90F Y119V F156L P197N",6
"lib2","SARS-CoV-2","ATCTAAAAAATACCCG",14,90.05,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y66T F99V S108L",3
"lib2","SARS-CoV-2","ATCTAAAAAATATAAC",1,55.39,10.89,0.05,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAAAAAATGACGT",5,108.77,10.75,-0.08,0.03,2.94,1.08,0,"1 nonsynonymous","N64F",1
"lib2","SARS-CoV-2","ATCTAAAAAGAAAATA",1,12.71,6.09,-4.75,2,3,1.23,0.01,">1 nonsynonymous","A22T T55C R124S",3
"lib2","SARS-CoV-2","ATCTAAAAAGCTAGGT",1,1.46,NA,NA,NA,NA,NA,NA,"stop","L122* T201Q",2
"lib2","SARS-CoV-2","ATCTAAAAATTTTACA",4,19.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N92G A105G",2
"lib2","SARS-CoV-2","ATCTAAAAGCACGCGA",1,12.89,6.9,-3.93,0.11,1.91,1.01,0,">1 nonsynonymous","T15L V32R K87T D98V G117V",5
"lib2","SARS-CoV-2","ATCTAAAAGCCAGGAA",1,43.25,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G9L T15R K87Y C158N",4
"lib2","SARS-CoV-2","ATCTAAAAGCCATATT",6,6.44,NA,NA,NA,NA,NA,NA,"stop","Y39* T46R P96K Y121V T140L",5
"lib2","SARS-CoV-2","ATCTAAAAGCTCCAAC",2,14.53,9.74,-1.09,0.15,1.94,1.06,0.01,">1 nonsynonymous","A105V S184K",2
"lib2","SARS-CoV-2","ATCTAAAAGTGTAAAG",15,1.16,NA,NA,NA,NA,NA,NA,"stop","S41Y F47* L95A Q168T",4
"lib2","SARS-CoV-2","ATCTAAACCGGCTAGA",1,39.71,9.91,-0.92,0.12,2.01,1.07,0,">1 nonsynonymous","E10L R16G K56V",3
"lib2","SARS-CoV-2","ATCTAAACGGTCGAAT",12,33.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F K94W S129L V153I F160A G166V",6
"lib2","SARS-CoV-2","ATCTAAAGAATGATAA",4,44.6,9.35,-1.49,0.13,1.98,1.1,0.01,">1 nonsynonymous","G86S K198P T201Y",3
"lib2","SARS-CoV-2","ATCTAAAGATGATTTC",1,10.76,6.31,-4.52,0.32,3,1.15,0.01,">1 nonsynonymous","D90R Y143Q N157G",3
"lib2","SARS-CoV-2","ATCTAAAGTAAATTCG",1,19.1,6.62,-4.22,0.46,1.5,1.06,0.03,">1 nonsynonymous","Y91F N107Y",2
"lib2","SARS-CoV-2","ATCTAAATACACCGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","R16C K56E T63A I104* H189V",5
"lib2","SARS-CoV-2","ATCTAAATACATCGTA",6,1.88,NA,NA,NA,NA,NA,NA,"stop","C6I Y39M V71L P96* N120R E135S",6
"lib2","SARS-CoV-2","ATCTAAATCCTTTTTT",14,142.97,10.63,-0.21,0.05,2.95,1.06,0,">1 nonsynonymous","N4L S43C L122S T148R",4
"lib2","SARS-CoV-2","ATCTAAATCGAAACTA",1,24.59,6.78,-4.06,0.54,1.5,1.15,0.05,">1 nonsynonymous","G86C A105R F134D V173M",4
"lib2","SARS-CoV-2","ATCTAAATGACAATGA",1,9.56,10.77,-0.06,0.13,2.65,1.37,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAAATGAGCAATT",2,10.77,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12D Y91N S200N",3
"lib2","SARS-CoV-2","ATCTAAATGATAAATC",3,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y V103N S113F R124I L183D P197L S200Y",7
"lib2","SARS-CoV-2","ATCTAAATGCAGATAT",9,25.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L95T K132I E141F",3
"lib2","SARS-CoV-2","ATCTAAATTCAGTAGC",4,53.37,9.63,-1.21,0.06,2.65,1.04,0,">1 nonsynonymous","R136H Q144S E154G P197R",4
"lib2","SARS-CoV-2","ATCTAAATTGTATGAT",10,276.65,10.83,-0.01,0.03,2.91,1.09,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","ATCTAACAAAGTGGGA",10,93.96,9.88,-0.96,0.09,2.38,1.01,0,">1 nonsynonymous","C61I D90G K128S",3
"lib2","SARS-CoV-2","ATCTAACAATACACGG",2,12.09,10.79,-0.05,0.11,2.68,1.33,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCTAACACAGGGAAC",3,24.31,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S29K F47C G146N Q168L",4
"lib2","SARS-CoV-2","ATCTAACATTGCGTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N N64S V71M S164H",4
"lib2","SARS-CoV-2","ATCTAACCAACTGATA",3,34.83,9.87,-0.96,0.11,2.45,1,0,"1 nonsynonymous","L38C",1
"lib2","SARS-CoV-2","ATCTAACCACTTCCAA",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y Y50N R78C K87R P161M Q176P",6
"lib2","SARS-CoV-2","ATCTAACCCATACAGT",2,5.43,10.59,-0.24,0.08,3,1.01,0,">1 nonsynonymous","E135T T201Y",2
"lib2","SARS-CoV-2","ATCTAACCCTAAGCTA",7,60.64,6,-4.84,1.04,1.5,1.21,0.01,">1 nonsynonymous","R27W D59F I80N",3
"lib2","SARS-CoV-2","ATCTAACGAAACCGCA",1,43.7,10.2,-0.63,0.04,2.8,1.11,0,">1 nonsynonymous","T46A Q84S N110Y",3
"lib2","SARS-CoV-2","ATCTAACGACGTGGCC",12,167.35,10.04,-0.79,0.08,2.29,1.07,0,">1 nonsynonymous","T55L S69W A105S",3
"lib2","SARS-CoV-2","ATCTAACGCCAAGAAC",2,31.18,10.64,-0.19,0.07,2.89,1.09,0,"1 nonsynonymous","L187H",1
"lib2","SARS-CoV-2","ATCTAACGCCAGTAAC",1,26.05,10.16,-0.67,0.09,2.81,1.12,0,">1 nonsynonymous","T15V I138V P149I",3
"lib2","SARS-CoV-2","ATCTAACGCCTATGAC",16,71.25,8.67,-2.17,0.14,1.74,1.06,0.01,">1 nonsynonymous","D90H D98W Y123S V153S S200Q",5
"lib2","SARS-CoV-2","ATCTAACTAACTTCTG",20,413.42,10.82,-0.02,0.02,2.95,1.06,0,">1 nonsynonymous","D97I T148R T201F",3
"lib2","SARS-CoV-2","ATCTAACTAGTCGACT",1,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G A14I D34H G101L T148P C158Y",6
"lib2","SARS-CoV-2","ATCTAACTGGATACCA",2,16.08,6,-4.84,2,3,1.3,0.01,"1 nonsynonymous","D112P",1
"lib2","SARS-CoV-2","ATCTAACTGTCGCCCA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","P7* Y39D L60N",3
"lib2","SARS-CoV-2","ATCTAACTTGTCCGAC",6,70.09,10.4,-0.43,0.04,2.88,1.09,0,">1 nonsynonymous","T15V V32L",2
"lib2","SARS-CoV-2","ATCTAAGAATCTACTA",14,98.35,6,-4.84,1.39,1.5,1.16,0.01,">1 nonsynonymous","D90K Y165S",2
"lib2","SARS-CoV-2","ATCTAAGAGTAGTATA",1,8.99,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","K132V R179A",2
"lib2","SARS-CoV-2","ATCTAAGCACAAAATG",8,94.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8T N40L G101V",3
"lib2","SARS-CoV-2","ATCTAAGCAGAACTAT",9,0,NA,NA,NA,NA,NA,NA,"stop","D34* Q84M N107G T148S C158W",5
"lib2","SARS-CoV-2","ATCTAAGCGCCGTAAC",1,9.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T S53L L60I V153S",4
"lib2","SARS-CoV-2","ATCTAAGCTTGAGTTT",2,84.71,8.46,-2.37,0.08,2.23,1.09,0,">1 nonsynonymous","S45E L57F N120S S147L T170M",5
"lib2","SARS-CoV-2","ATCTAAGGAAGAAATC",6,33.54,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","D97F W106Q P161S T201I",4
"lib2","SARS-CoV-2","ATCTAAGGGTACATTC",1,62.26,10.84,0,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAAGGTTACTGTA",8,472.26,10,-0.84,0.05,2.34,1,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","ATCTAAGTATTTATAT",8,120.36,9.72,-1.11,0.03,2.97,1.05,0,">1 nonsynonymous","C61V P169D",2
"lib2","SARS-CoV-2","ATCTAAGTTCGAATCT",1,29.4,10.64,-0.2,0.05,2.97,1,0,">1 nonsynonymous","T3F G152S",2
"lib2","SARS-CoV-2","ATCTAATAAAGCAATC",3,25.87,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","K48H K128T C150Y",3
"lib2","SARS-CoV-2","ATCTAATAAAGTACCC",6,94.74,8.86,-1.97,0.07,2.55,1.09,0,">1 nonsynonymous","R73P E141S",2
"lib2","SARS-CoV-2","ATCTAATAACACAGAT",1,11.6,10.68,-0.16,0.08,2.72,1.28,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAATAACTATTGA",1,23.78,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V37N F99W I104R",3
"lib2","SARS-CoV-2","ATCTAATACGACTTTT",2,37.1,9.33,-1.5,0.13,1.66,1.06,0.01,">1 nonsynonymous","S36C F62D S139G",3
"lib2","SARS-CoV-2","ATCTAATAGCAAATAG",4,0.98,NA,NA,NA,NA,NA,NA,"stop","N30L V37C N92* S184R",4
"lib2","SARS-CoV-2","ATCTAATAGTAATAAC",3,28.62,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","T15P D97L I138L A145V P177I",5
"lib2","SARS-CoV-2","ATCTAATATTTCCAAA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","L122* T148* C150Y F167T",4
"lib2","SARS-CoV-2","ATCTAATATTTCCTAA",1,38.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36M V71P P82Q",3
"lib2","SARS-CoV-2","ATCTAATCCATCAATA",4,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107V N118H D137E N171R",4
"lib2","SARS-CoV-2","ATCTAATCTACATCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39D F99V",2
"lib2","SARS-CoV-2","ATCTAATGCTGCGGAC",11,88.07,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37R G86V",2
"lib2","SARS-CoV-2","ATCTAATGTTGTTTTA",1,15.07,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F99Y W106A",2
"lib2","SARS-CoV-2","ATCTAATTCGTAACCC",9,6.43,7.82,-3.02,0.47,2.42,1.27,0.05,">1 nonsynonymous","Y35P K94Q G146E",3
"lib2","SARS-CoV-2","ATCTAATTGGACCTGA",6,10.28,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C6F N13C N40W L57N T63H L125G D137K",7
"lib2","SARS-CoV-2","ATCTAATTTGACACGA",6,7.87,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A18T K56I D90R I104H V115G",5
"lib2","SARS-CoV-2","ATCTAATTTTGCACGG",2,29.41,10.96,0.12,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTACAAAAATAGCC",2,78.53,10.27,-0.57,0.04,2.85,1.03,0,">1 nonsynonymous","S36E K48S Q84H",3
"lib2","SARS-CoV-2","ATCTACAAAGAAACGC",6,26.73,9.33,-1.51,0.13,1.88,1.09,0.01,">1 nonsynonymous","Y21S S45P",2
"lib2","SARS-CoV-2","ATCTACAATATCAAGA",25,4.65,NA,NA,NA,NA,NA,NA,"stop","S36* T55I G83N",3
"lib2","SARS-CoV-2","ATCTACAATCCGTAAA",1,50.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D112W L125S V173M",3
"lib2","SARS-CoV-2","ATCTACAATGAGTACT",3,16.34,6.1,-4.74,0.72,1.96,1.21,0.02,">1 nonsynonymous","A22N D112R Y119A",3
"lib2","SARS-CoV-2","ATCTACACAAAAATAG",3,25.2,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","P54R N64G A105L C158F",4
"lib2","SARS-CoV-2","ATCTACACCATTGTAT",3,8.81,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C6D F44G F62V D68G Q144I L162F",6
"lib2","SARS-CoV-2","ATCTACACGGGGATTG",3,28.52,7.61,-3.22,0.35,1.5,1.03,0.04,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","ATCTACAGCCACCATA",3,16.18,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15Y F44W P133L G152L",4
"lib2","SARS-CoV-2","ATCTACAGGACAGAAG",15,261.18,9.4,-1.43,0.06,2.69,1.08,0,">1 nonsynonymous","G51F L125G",2
"lib2","SARS-CoV-2","ATCTACATACAGTAAG",1,15.88,9.14,-1.69,0.07,2.92,1.1,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","ATCTACATACGGCTTA",2,41.41,10.46,-0.37,0.06,2.96,1,0,">1 nonsynonymous","E10R K56A T100Y E141A",4
"lib2","SARS-CoV-2","ATCTACATCCTGTGAC",4,40.65,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I28W D97N S139T V180N",4
"lib2","SARS-CoV-2","ATCTACATCGGACTAC",4,67.71,10.05,-0.79,0.05,3,1.02,0,">1 nonsynonymous","T55H C61S R78D N151P",4
"lib2","SARS-CoV-2","ATCTACATCTAGGGAA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G T100S N107K N171C S184F",5
"lib2","SARS-CoV-2","ATCTACATTGTTAGAA",1,9.78,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K128P Y165R Y175A A190C T201R",5
"lib2","SARS-CoV-2","ATCTACCAATAATTGT",10,43.23,6.53,-4.31,0.48,1.5,1.12,0.03,">1 nonsynonymous","S41D L60F K94T",3
"lib2","SARS-CoV-2","ATCTACCTAAGAACAA",1,20.18,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y35S K48T Y66H P177F S184P",5
"lib2","SARS-CoV-2","ATCTACCTGTAACAAA",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I Y119S L125M",3
"lib2","SARS-CoV-2","ATCTACCTGTATGGTA",5,80.14,10.79,-0.04,0.04,2.98,1.02,0,"1 nonsynonymous","G196T",1
"lib2","SARS-CoV-2","ATCTACGAAGATCTAG",2,11.93,10.77,-0.06,0.09,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTACGAAGCAAGAC",2,32.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G83Q D97L G116Q Y175T",4
"lib2","SARS-CoV-2","ATCTACGACTCTTATC",2,24.21,8.82,-2.01,0.25,1.5,1,0.04,"1 nonsynonymous","R25M",1
"lib2","SARS-CoV-2","ATCTACGCCGTACTGC",3,23.81,6.42,-4.42,0.52,1.5,1.09,0.02,">1 nonsynonymous","C6F R179L",2
"lib2","SARS-CoV-2","ATCTACGCGTTTTTAC",5,15.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127W A145V L183G",3
"lib2","SARS-CoV-2","ATCTACGGGGGGTGTT",6,42.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19N N40D I80G F126Y V182T K199A",6
"lib2","SARS-CoV-2","ATCTACGTAGTATCCT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","A18Y S41F T140D Q144* E154L",5
"lib2","SARS-CoV-2","ATCTACGTCTCCCGTA",6,42.51,10.89,0.06,0.04,3,1.01,0,">1 nonsynonymous","S147P A190N",2
"lib2","SARS-CoV-2","ATCTACTCAAGCTATA",1,8.17,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","Y21R T100D",2
"lib2","SARS-CoV-2","ATCTACTTGGCCGATT",3,46.06,7.23,-3.61,0.19,1.59,1.13,0.01,">1 nonsynonymous","F8G K56G T100M Y119A G166K",5
"lib2","SARS-CoV-2","ATCTACTTTAGACCAA",6,88.83,9.55,-1.29,0.09,2.48,1.09,0,">1 nonsynonymous","N1R D90Q T140M Y159F",4
"lib2","SARS-CoV-2","ATCTACTTTGTAAGCA",1,8.08,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R25A T140N P149S",3
"lib2","SARS-CoV-2","ATCTAGAAAAATGACT",1,58.57,10.08,-0.76,0.06,2.54,1.02,0,">1 nonsynonymous","F99L S113A",2
"lib2","SARS-CoV-2","ATCTAGAAATACAATA",3,20.47,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L5S A105S R136I C158E Q176T",5
"lib2","SARS-CoV-2","ATCTAGAATCATCCAA",2,32.91,10.65,-0.19,0.05,2.96,1.04,0,">1 nonsynonymous","P96S L122T",2
"lib2","SARS-CoV-2","ATCTAGAATTATAGTG",2,66.09,10.7,-0.13,0.04,2.97,1.05,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","ATCTAGACTGCAACGT",1,51.6,10.81,-0.02,0.08,2.97,1.05,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","ATCTAGATAAGTACTT",8,4.4,NA,NA,NA,NA,NA,NA,"stop","A33T L60* Y66R G83F K128V V173L P197H",7
"lib2","SARS-CoV-2","ATCTAGATAGATGCAG",12,80.56,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P82T D97F G116E",3
"lib2","SARS-CoV-2","ATCTAGATGCATTCAC",4,76.46,10.88,0.05,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAGCAAACACTCA",1,20.04,6.92,-3.92,0.45,1.5,1.01,0.04,">1 nonsynonymous","N4P F8D G86F G152L",4
"lib2","SARS-CoV-2","ATCTAGCAAGATCACG",1,23.67,10.82,-0.02,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTAGCAATCAAAGA",3,8.86,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","ATCTAGCCCAAGTCCT",2,24.87,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T55D P96Y F99L Q168I",4
"lib2","SARS-CoV-2","ATCTAGCCCATCCAAA",10,130.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A89F N107C T148N N171S Y178P",5
"lib2","SARS-CoV-2","ATCTAGCGCCCCCCGC",1,4.75,NA,NA,NA,NA,NA,NA,"stop","C6D F99C I104*",3
"lib2","SARS-CoV-2","ATCTAGGAACGCTTCG",1,14.98,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","R127V",1
"lib2","SARS-CoV-2","ATCTAGGAGGCCAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","N40P N64V K87* S113T A145F S184L",6
"lib2","SARS-CoV-2","ATCTAGGCCCCTGCAA",6,45.3,10.19,-0.65,0.09,2.69,1.03,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","ATCTAGGTATTTAGGG",2,27.65,10.25,-0.58,0.08,2.86,1,0,">1 nonsynonymous","R16D L60V G152F",3
"lib2","SARS-CoV-2","ATCTAGTATTATAGGA",17,126.87,9.5,-1.34,0.07,1.93,1.07,0,">1 nonsynonymous","L60V L131F",2
"lib2","SARS-CoV-2","ATCTAGTCAAACCTAG",3,2.41,NA,NA,NA,NA,NA,NA,"stop","G74L G155T Y175*",3
"lib2","SARS-CoV-2","ATCTAGTCTACAATAG",4,12.18,10.71,-0.13,0.18,2.69,1.18,0.01,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","ATCTAGTGATGTGTAT",9,215.79,9.87,-0.97,0.04,2.92,1.07,0,">1 nonsynonymous","K87E E141T",2
"lib2","SARS-CoV-2","ATCTAGTTAACGAGTT",5,5.81,NA,NA,NA,NA,NA,NA,"stop","V37T P96* P177R",3
"lib2","SARS-CoV-2","ATCTAGTTGACAGGGT",1,80.02,8.87,-1.97,0.19,1.51,1.17,0.01,">1 nonsynonymous","Y50L A192K",2
"lib2","SARS-CoV-2","ATCTATAAAGCCGGAT",4,40.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91R L131S",2
"lib2","SARS-CoV-2","ATCTATAAGTATACGT",1,59.29,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F17L C150K Y178I",3
"lib2","SARS-CoV-2","ATCTATAATAGTCCGG",5,21.04,6.69,-4.15,0.36,2.32,1.25,0.02,">1 nonsynonymous","P54R C61S V103K",3
"lib2","SARS-CoV-2","ATCTATACAGGAACCA",12,47.73,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","R16S C49T K56Y T170L",4
"lib2","SARS-CoV-2","ATCTATACCTCTAAAT",1,7.66,10.84,0,0.09,2.74,1.25,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","ATCTATACGCTCACGA",1,7.92,10.11,-0.73,0.2,2.21,1.04,0.02,">1 nonsynonymous","I2N K56S K94G",3
"lib2","SARS-CoV-2","ATCTATACTCATATAT",23,741.82,10.82,-0.02,0.04,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCTATACTGCAAAAG",3,51.55,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","D59R T85N N92L",3
"lib2","SARS-CoV-2","ATCTATAGACTCATAG",6,27.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P82L C102R K114E",3
"lib2","SARS-CoV-2","ATCTATAGGTGAATAG",6,50.39,9.64,-1.19,0.07,1.91,1.06,0,">1 nonsynonymous","A18L G51H",2
"lib2","SARS-CoV-2","ATCTATATAGCTCTAC",8,40.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K56G P82M P133R",3
"lib2","SARS-CoV-2","ATCTATATATCCCGGC",6,38.09,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9M K56M P96F Q144D",4
"lib2","SARS-CoV-2","ATCTATATTAAACTTG",4,1.45,NA,NA,NA,NA,NA,NA,"stop","S43Y Y66L I104* G117W",4
"lib2","SARS-CoV-2","ATCTATATTCTAATAA",6,43.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8N N40G T55D L57S F99Y V173Q",6
"lib2","SARS-CoV-2","ATCTATATTTGCTATA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","N58T P177*",2
"lib2","SARS-CoV-2","ATCTATCACCAGCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y Y119K K199Q",3
"lib2","SARS-CoV-2","ATCTATCACTCACCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L60* Q163G",2
"lib2","SARS-CoV-2","ATCTATCACTCCTACC",1,36.06,10.92,0.09,0.07,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCTATCATGCGTTAA",2,14.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V D98V E135V",3
"lib2","SARS-CoV-2","ATCTATCCAAGCCACA",19,349.48,8.54,-2.3,0.09,3,1.05,0,">1 nonsynonymous","Y119A T148L G174E",3
"lib2","SARS-CoV-2","ATCTATCCCGTTGAGG",1,61.7,10.72,-0.11,0.03,2.97,1.04,0,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","ATCTATCCGACAGAAC",1,30.93,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","L38W R127S G152N Q163L Y175S",5
"lib2","SARS-CoV-2","ATCTATCGCTGGCGAC",7,185.75,10.18,-0.65,0.03,2.91,1.03,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","ATCTATCTACTGTACA",20,224.06,8.33,-2.5,0.16,2.72,1.09,0.01,"1 nonsynonymous","N157W",1
"lib2","SARS-CoV-2","ATCTATCTTCAGACTT",1,9.38,6.02,-4.82,1.86,1.5,1.15,0.06,">1 nonsynonymous","E76F K87L D97N Q168K",4
"lib2","SARS-CoV-2","ATCTATGAATTAGCAT",3,20.5,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D34A W106T G166W",3
"lib2","SARS-CoV-2","ATCTATGTAATACATT",6,85.29,10.8,-0.04,0.05,2.94,1.02,0,">1 nonsynonymous","P54M K132N",2
"lib2","SARS-CoV-2","ATCTATGTCGTTAAAC",10,111.26,7.45,-3.38,0.27,1.5,1.1,0.03,">1 nonsynonymous","P96L E141R",2
"lib2","SARS-CoV-2","ATCTATTATAGAAATA",4,63.22,10.26,-0.58,0.05,2.89,1.04,0,">1 nonsynonymous","R16V G83V L125M",3
"lib2","SARS-CoV-2","ATCTATTCAACTTCTT",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29H L57F G174T",3
"lib2","SARS-CoV-2","ATCTATTCAGTTGTTT",3,83.88,9.73,-1.1,0.09,2.32,1.07,0,">1 nonsynonymous","V11W K26M N58L F160S",4
"lib2","SARS-CoV-2","ATCTATTCCCTCGAAC",1,16.33,10.04,-0.8,0.06,2.85,1.04,0,">1 nonsynonymous","C6I Y91F",2
"lib2","SARS-CoV-2","ATCTATTCGCAGAAAC",1,10.09,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","L95P K128W",2
"lib2","SARS-CoV-2","ATCTATTCTTTAAAGG",7,75.24,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D68A G116D E141G",3
"lib2","SARS-CoV-2","ATCTATTTACAATGTC",1,42.4,9.73,-1.11,0.11,1.77,1.01,0.01,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","ATCTCAAAACGCCTGT",4,2.99,NA,NA,NA,NA,NA,NA,"stop","T15Q V37* D90T",3
"lib2","SARS-CoV-2","ATCTCAAAATCTTGAG",7,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76T G152A E186F",3
"lib2","SARS-CoV-2","ATCTCAAATTGTACGG",9,44.24,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","A33P C49D S129K P197Q",4
"lib2","SARS-CoV-2","ATCTCAAATTTACTAA",9,1.16,NA,NA,NA,NA,NA,NA,"stop","D98A T148*",2
"lib2","SARS-CoV-2","ATCTCAACCAAGAACC",3,20.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V115L R179L T201R",3
"lib2","SARS-CoV-2","ATCTCAACTTAGATGG",1,22.6,10.16,-0.67,0.04,2.95,1.09,0,">1 nonsynonymous","P149R F156L",2
"lib2","SARS-CoV-2","ATCTCAATAGAACCAA",4,66.59,6,-4.84,1.27,1.5,1.24,0.02,">1 nonsynonymous","F17E G86S V173F Q176F",4
"lib2","SARS-CoV-2","ATCTCAATCTTTTACC",2,19.52,6.37,-4.47,0.72,1.5,1.16,0.03,">1 nonsynonymous","T85W W106F G116F G146F",4
"lib2","SARS-CoV-2","ATCTCAATGGAAGCAG",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","ATCTCACAAAGGCTAT",2,13.58,8.17,-2.66,0.26,1.5,1.02,0.02,">1 nonsynonymous","P82R P149R",2
"lib2","SARS-CoV-2","ATCTCACAAGGAATCT",5,61.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2R Y35I L131P S139N",4
"lib2","SARS-CoV-2","ATCTCACAGATACCAT",1,42.75,8.24,-2.6,0.11,2.36,1,0,">1 nonsynonymous","F44S V52Y T100K F126R",4
"lib2","SARS-CoV-2","ATCTCACAGTATTCGA",3,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L P54H F99M V103W T201K",5
"lib2","SARS-CoV-2","ATCTCACCCTTAACGT",9,150.24,6,-4.84,1.73,1.5,1.17,0.01,">1 nonsynonymous","G9Q D97G F160C F167A",4
"lib2","SARS-CoV-2","ATCTCACCGTGCGTAA",8,8.68,8.55,-2.28,0.25,1.5,1.18,0.04,">1 nonsynonymous","T3A T15E V32G K94R Q163W S184A",6
"lib2","SARS-CoV-2","ATCTCACTATAATAAC",2,33.49,10.74,-0.1,0.07,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCACTGGAACGTT",3,55.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11S Y119V P169F",3
"lib2","SARS-CoV-2","ATCTCACTTCGCCTTT",1,47.79,10.8,-0.04,0.06,2.92,1.08,0,"1 nonsynonymous","T63K",1
"lib2","SARS-CoV-2","ATCTCAGAAACAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I A81S Y93M L122V",4
"lib2","SARS-CoV-2","ATCTCAGAACAAACAG",10,54.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35S D137P",2
"lib2","SARS-CoV-2","ATCTCAGACAATACAA",2,17.06,10.38,-0.46,0.22,2.66,1.04,0.03,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCAGATACCAATG",3,117.42,10.65,-0.19,0.06,2.91,1.03,0,">1 nonsynonymous","T46V G116N",2
"lib2","SARS-CoV-2","ATCTCAGATGTTGTGT",2,32.56,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","D68K Y123F",2
"lib2","SARS-CoV-2","ATCTCAGCAAAGCAAA",2,60.97,8.51,-2.32,0.12,2.04,1.06,0,"1 nonsynonymous","Y165P",1
"lib2","SARS-CoV-2","ATCTCAGGATCCCAAT",8,102.86,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A14K Y91F D112F Y175I",4
"lib2","SARS-CoV-2","ATCTCAGTGTTGATAA",6,33.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S V37S G86R G117Y C158A",5
"lib2","SARS-CoV-2","ATCTCAGTTCCCGTGA",3,13.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S19M I142K",2
"lib2","SARS-CoV-2","ATCTCATAAAAAGGTT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P G101R Y119T F167V",4
"lib2","SARS-CoV-2","ATCTCATAACTGGACA",4,7.11,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","E135Y Y143G P149I",3
"lib2","SARS-CoV-2","ATCTCATACTAACGCA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y Y123L",2
"lib2","SARS-CoV-2","ATCTCATACTCGTCCA",4,24.41,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","T3F C31T D90C R127Q Y178P P191R",6
"lib2","SARS-CoV-2","ATCTCATCACATGTTA",5,50.79,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N107L N157Y",2
"lib2","SARS-CoV-2","ATCTCATCTGTTTAAA",1,20.77,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I28S Y35T S41H N107L P133D",5
"lib2","SARS-CoV-2","ATCTCATGGAGTTTGC",1,77.69,10.75,-0.09,0.04,2.93,1.09,0,">1 nonsynonymous","R16V F160V",2
"lib2","SARS-CoV-2","ATCTCCAAAAAGATAC",4,0,NA,NA,NA,NA,NA,NA,"stop","E76L D90Y D98E E154* P161R",5
"lib2","SARS-CoV-2","ATCTCCAATTAATTAT",23,465.48,10.18,-0.66,0.02,2.92,1.04,0,">1 nonsynonymous","Y121L Q144G",2
"lib2","SARS-CoV-2","ATCTCCACAAACAGAC",6,82.34,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y165Q T170Y",2
"lib2","SARS-CoV-2","ATCTCCACACAAACGA",4,29.92,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y91L Y143L N171K",3
"lib2","SARS-CoV-2","ATCTCCACACCGAACG",5,30.95,10.79,-0.04,0.08,2.91,1.11,0,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","ATCTCCACGAGTATTC",14,35.83,9.22,-1.61,0.17,1.5,1.04,0.02,">1 nonsynonymous","P54T K94G N130I V173A",4
"lib2","SARS-CoV-2","ATCTCCACTACCGAGC",15,110.58,8.24,-2.59,0.15,1.8,1.12,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","ATCTCCACTCAGCTGT",3,59.36,10.63,-0.21,0.03,2.92,1.09,0,">1 nonsynonymous","G9R K198H",2
"lib2","SARS-CoV-2","ATCTCCAGTATTGAAA",5,35.71,10.59,-0.24,0.07,2.88,1.11,0,">1 nonsynonymous","N4T G51R C61T P197Q",4
"lib2","SARS-CoV-2","ATCTCCATCCCCTAGC",8,123.15,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P96R I142T G152D P177L K199H",5
"lib2","SARS-CoV-2","ATCTCCCAACGAGGAA",5,102.76,9.47,-1.37,0.05,1.97,1.06,0,">1 nonsynonymous","D59M F185C",2
"lib2","SARS-CoV-2","ATCTCCCAATGTAAAC",11,168.59,9.81,-1.03,0.09,2.46,1.03,0,">1 nonsynonymous","V11I Y35D N120L",3
"lib2","SARS-CoV-2","ATCTCCCCGCCTCCGT",11,126.78,6,-4.84,1.3,1.5,1.16,0.01,">1 nonsynonymous","V20G R25V D34A F47D T63A D90S G117E K199I",8
"lib2","SARS-CoV-2","ATCTCCCCTAAAAGAC",3,52.19,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","S108P R127P R136S N157S T193I",5
"lib2","SARS-CoV-2","ATCTCCCCTCACTATC",6,141.95,8.67,-2.17,0.07,2.9,1.09,0,">1 nonsynonymous","S36T S113V K198Q",3
"lib2","SARS-CoV-2","ATCTCCCGCCTATGTG",7,144.78,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2F L38N C150S",3
"lib2","SARS-CoV-2","ATCTCCGACAGTTTGA",4,23.44,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49F L95V D112S L122M A145P",5
"lib2","SARS-CoV-2","ATCTCCGCATAGATCT",19,252.22,10.21,-0.63,0.05,2.64,1.01,0,">1 nonsynonymous","T3I G83W",2
"lib2","SARS-CoV-2","ATCTCCGGGCCCTTCA",21,263.54,9.02,-1.81,0.04,2.89,1.07,0,">1 nonsynonymous","K87S I104M G155N",3
"lib2","SARS-CoV-2","ATCTCCGGGCTTCTTG",3,72.71,6.3,-4.53,0.64,1.5,1.18,0.02,">1 nonsynonymous","Y93P R127L P161L",3
"lib2","SARS-CoV-2","ATCTCCGGTTTGCTGT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","ATCTCCGTCACAGTGG",3,25.78,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N1K C6Y S45P D137G K198C",5
"lib2","SARS-CoV-2","ATCTCCTAATAAACTA",2,30.31,8.75,-2.08,0.14,2.66,1.03,0.01,">1 nonsynonymous","G152V T170F",2
"lib2","SARS-CoV-2","ATCTCCTAATTACTTA",17,94.06,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G83T C102E N118V R136T",4
"lib2","SARS-CoV-2","ATCTCCTATACATTAC",1,33.66,10.05,-0.79,0.05,2.63,1.05,0,"1 nonsynonymous","N30L",1
"lib2","SARS-CoV-2","ATCTCCTATGATGATC",1,5.04,8.5,-2.33,0.44,1.58,1.13,0.05,"1 nonsynonymous","P96W",1
"lib2","SARS-CoV-2","ATCTCCTCTACGAAAA",15,157.97,10.76,-0.08,0.08,2.91,1.09,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","ATCTCCTCTGCTTATA",2,30.38,10.8,-0.03,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCCTTACTTCCAT",17,78.8,6.3,-4.53,0.53,1.5,1.2,0.02,">1 nonsynonymous","P96T C102K Q163R",3
"lib2","SARS-CoV-2","ATCTCCTTTATTACGC",3,47.91,10.85,0.01,0.07,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCGAAAACTTCTA",3,30.27,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V20I W106C",2
"lib2","SARS-CoV-2","ATCTCGAATACCAATA",4,15.42,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N24W A42W D112S I142V G172C",5
"lib2","SARS-CoV-2","ATCTCGAATCGCATCA",2,62.36,10.85,0.01,0.06,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCGACCACTGTGC",6,167.31,10.81,-0.03,0.04,2.98,1.03,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","ATCTCGACCCTATGGG",7,59.73,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","L95F G152P L162H",3
"lib2","SARS-CoV-2","ATCTCGAGATTAGTCA",10,25.89,6.84,-3.99,0.41,1.5,1.18,0.02,">1 nonsynonymous","A14V D137Y",2
"lib2","SARS-CoV-2","ATCTCGCCGTATAACA",10,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W L5I V37G K87L S200C",5
"lib2","SARS-CoV-2","ATCTCGCTAAATGCAC",2,64.95,10.8,-0.03,0.05,2.94,1.06,0,">1 nonsynonymous","V77L S147Y",2
"lib2","SARS-CoV-2","ATCTCGGGTGATACAC",1,8.96,7.31,-3.53,2,1.5,1.14,0.05,">1 nonsynonymous","G83D D90G T100R G155R",4
"lib2","SARS-CoV-2","ATCTCGTTCTCCAAAC",6,72.2,10.39,-0.45,0.05,2.85,1.07,0,">1 nonsynonymous","A22S Y35L I88V K128G",4
"lib2","SARS-CoV-2","ATCTCTAACCTCGTAA",18,227.77,8.25,-2.59,0.12,2.19,1.06,0.01,">1 nonsynonymous","C6L N120T",2
"lib2","SARS-CoV-2","ATCTCTAACTTTTAAC",1,3.43,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATCTCTAATCCCATGT",6,8.98,7.98,-2.86,0.5,1.55,1.07,0.06,">1 nonsynonymous","D97S I104R",2
"lib2","SARS-CoV-2","ATCTCTACGTTTGGAT",3,34.62,9.24,-1.6,0.07,2.85,1.09,0,"1 nonsynonymous","G117M",1
"lib2","SARS-CoV-2","ATCTCTAGTACTCATT",2,23.64,8.56,-2.27,0.3,1.5,1,0.03,"1 nonsynonymous","Y21K",1
"lib2","SARS-CoV-2","ATCTCTAGTAGCTCAT",9,74.34,10.74,-0.09,0.05,2.97,1.04,0,"1 nonsynonymous","Q84I",1
"lib2","SARS-CoV-2","ATCTCTAGTATGGAAC",2,6.26,6.91,-3.93,0.22,2.08,1.05,0.01,">1 nonsynonymous","G86K N130F",2
"lib2","SARS-CoV-2","ATCTCTCAAGACAAGT",6,2.55,NA,NA,NA,NA,NA,NA,"stop","K56R T63Y W106* L122S T148I",5
"lib2","SARS-CoV-2","ATCTCTCCTGCCTTTG",2,23.76,10.53,-0.31,0.06,2.91,1.09,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","ATCTCTCTATACTTAT",1,58.39,8.65,-2.19,0.08,2.67,1.06,0,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","ATCTCTGATTCAACAG",2,17.06,10.83,0,0.11,2.74,1.16,0.01,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","ATCTCTGCTTACAAAA",5,17.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L P96L N107A P149L Y165R",5
"lib2","SARS-CoV-2","ATCTCTGGAATTATTA",6,133.79,10.29,-0.54,0.04,2.91,1.06,0,">1 nonsynonymous","N120F K128L",2
"lib2","SARS-CoV-2","ATCTCTGGAGCGTATA",14,127.33,6,-4.84,2,3,1.22,0,">1 nonsynonymous","A22M V37M P82S Y91T V103M N110W P177K T201N",8
"lib2","SARS-CoV-2","ATCTCTGTTGAATATC",1,13.79,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y35C A67G F99I G155I",4
"lib2","SARS-CoV-2","ATCTCTTATATAAAGC",12,41.2,8.1,-2.73,0.2,1.5,1.07,0.01,">1 nonsynonymous","G116F R136I I142Y",3
"lib2","SARS-CoV-2","ATCTCTTCTAAACAAC",2,49.36,10.59,-0.25,0.04,2.96,1.06,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","ATCTCTTGACATAATT",2,13.94,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","S19F D59T P82T P133S N151S",5
"lib2","SARS-CoV-2","ATCTCTTTCTGTCAAA",4,29.33,10.31,-0.52,0.09,2.53,1,0,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","ATCTGAAAAAGTACCT",6,66.5,8.66,-2.18,0.11,1.79,1.11,0,">1 nonsynonymous","E10D C31G S36F N120D S129Y",5
"lib2","SARS-CoV-2","ATCTGAAAGAGAAATG",9,200.19,6.24,-4.6,0.66,1.5,1.17,0.02,">1 nonsynonymous","Y35L K87M V103A Q144Y",4
"lib2","SARS-CoV-2","ATCTGAAATACGGGAA",8,0.16,NA,NA,NA,NA,NA,NA,"stop","A18F G86* A105L G155S R179A",5
"lib2","SARS-CoV-2","ATCTGAACCCAGGTTG",8,55.12,10.13,-0.71,0.07,2.48,1.07,0,">1 nonsynonymous","N13R D90S",2
"lib2","SARS-CoV-2","ATCTGAACCTTACGAC",3,21.08,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N24Q A81V S113D",3
"lib2","SARS-CoV-2","ATCTGAACCTTCCGTC",10,47.18,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","W23E S41R C61V I72M A105P",5
"lib2","SARS-CoV-2","ATCTGAACGGGATAAT",6,146.22,10.77,-0.07,0.03,2.93,1.07,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","ATCTGACAAATGCCCG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q D59H N92D D98T F126N",5
"lib2","SARS-CoV-2","ATCTGACAAGAAAAGT",3,9.44,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14D Y121P C158P N171S",4
"lib2","SARS-CoV-2","ATCTGACACATCTCCA",11,122.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A33S T55P G172W",3
"lib2","SARS-CoV-2","ATCTGACACTATCCCT",2,35.72,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","I88S P96N V173R T201N",4
"lib2","SARS-CoV-2","ATCTGACATACAACGG",4,17.44,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","N1S C6R T63H Y93F K114S N120V",6
"lib2","SARS-CoV-2","ATCTGACCAGAAAAAA",4,64.89,8.84,-1.99,0.06,2.95,1.1,0,">1 nonsynonymous","K26I G117L",2
"lib2","SARS-CoV-2","ATCTGACCATGAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y21* D90H",2
"lib2","SARS-CoV-2","ATCTGACTATAATTAA",3,10.81,9.66,-1.17,0.16,2.07,1.05,0.02,"1 nonsynonymous","L162Q",1
"lib2","SARS-CoV-2","ATCTGACTTCACTGTA",6,2.02,NA,NA,NA,NA,NA,NA,"stop","L122M G172*",2
"lib2","SARS-CoV-2","ATCTGAGGCCGACAAC",3,11.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A81L S129R",2
"lib2","SARS-CoV-2","ATCTGAGTATGACTAC",7,82.81,10.43,-0.41,0.05,2.87,1.12,0,">1 nonsynonymous","S36K A42D N64V R78S N120E P191C P197K",7
"lib2","SARS-CoV-2","ATCTGATACATCAACG",6,79.86,6,-4.84,1.95,1.64,1.16,0.01,">1 nonsynonymous","N4G F44R D68G S184G",4
"lib2","SARS-CoV-2","ATCTGATACCCTAGCT",2,6.92,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A22E T63D F70S K87N L95G S113H Y119A",7
"lib2","SARS-CoV-2","ATCTGATGATCATACG",3,1.88,NA,NA,NA,NA,NA,NA,"stop","L57F P96H T140* P169I",4
"lib2","SARS-CoV-2","ATCTGATTGGACATCT",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F Q79L N107S",3
"lib2","SARS-CoV-2","ATCTGATTTCACCTTT",4,2.88,NA,NA,NA,NA,NA,NA,"stop","R16G N64D Q144L F160* G166K",5
"lib2","SARS-CoV-2","ATCTGATTTCTTACTA",3,49.45,9.67,-1.17,0.05,2.89,1.06,0,">1 nonsynonymous","R73M G83A",2
"lib2","SARS-CoV-2","ATCTGCAGCATGAACT",6,5.38,NA,NA,NA,NA,NA,NA,"stop","R25S S69* G83D F99I P149G P161V",6
"lib2","SARS-CoV-2","ATCTGCAGTCGGCAAT",2,29.77,8.34,-2.49,0.12,2.95,1.07,0.01,">1 nonsynonymous","L122V P149F N157H",3
"lib2","SARS-CoV-2","ATCTGCATAAATCTAT",11,78.87,10.88,0.05,0.05,2.91,1.09,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","ATCTGCCAGAGAAGCT",1,118.15,10.86,0.03,0.06,2.93,1.08,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","ATCTGCCAGCGACATT",8,121.65,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39E G86I N157Y G172R",4
"lib2","SARS-CoV-2","ATCTGCCCGATTATCA",6,11.08,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F99R Y119N F156K",3
"lib2","SARS-CoV-2","ATCTGCCGACCATTTT",5,77.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T63K F70V G74M",3
"lib2","SARS-CoV-2","ATCTGCCGGATAACTT",15,499.25,10.22,-0.62,0.02,2.93,1.03,0,">1 nonsynonymous","Y35S G174N",2
"lib2","SARS-CoV-2","ATCTGCCGGTTTAATG",6,2.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","ATCTGCGAATAATCAG",2,8.81,10.59,-0.25,0.12,2.98,1,0,"1 nonsynonymous","F62H",1
"lib2","SARS-CoV-2","ATCTGCGTTTTCTTCG",1,13.07,9.25,-1.59,0.13,1.96,1.07,0.01,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","ATCTGCTAATAATTTA",4,193.96,6.05,-4.78,0.8,1.5,1.27,0.01,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","ATCTGCTTAGTTTTGT",4,44.73,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","E10N V71S G116C F156Y",4
"lib2","SARS-CoV-2","ATCTGCTTATAACCAG",11,86.58,6.3,-4.54,0.7,1.5,1.2,0.03,">1 nonsynonymous","A105Q E135T E141D",3
"lib2","SARS-CoV-2","ATCTGGAATCAGCGAG",8,149.93,10.22,-0.62,0.03,2.89,1.04,0,">1 nonsynonymous","T46D L60T",2
"lib2","SARS-CoV-2","ATCTGGAGAAATGAAG",10,46.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F70Q N107S G146E",3
"lib2","SARS-CoV-2","ATCTGGAGTGGTGCAA",4,0.62,NA,NA,NA,NA,NA,NA,"stop","R25L P54I Y123* Q176S",4
"lib2","SARS-CoV-2","ATCTGGCCGAGCGCCT",16,146.09,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38P G86S D98Y",3
"lib2","SARS-CoV-2","ATCTGGCGCCAACCAA",11,0.44,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","ATCTGGGCATAGTCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","W23R D98T G116* Y123S E141R P161S",6
"lib2","SARS-CoV-2","ATCTGGGCGGCCTGCT",6,35.79,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L60F A81G R136T T170I",4
"lib2","SARS-CoV-2","ATCTGGGCTAGAACCA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","P7N T15G G86*",3
"lib2","SARS-CoV-2","ATCTGGGGTGCATTTT",2,10.89,9.65,-1.19,0.13,3,1,0,">1 nonsynonymous","V103I F156Y A190I",3
"lib2","SARS-CoV-2","ATCTGGGTTGAGGAGT",2,1.43,NA,NA,NA,NA,NA,NA,"stop","E10T F17* S108Y Y119S V181S",5
"lib2","SARS-CoV-2","ATCTGGTAAAATCCGA",1,7.53,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N40M A105K",2
"lib2","SARS-CoV-2","ATCTGGTAATGGACAG",4,38.57,10.83,-0.01,0.07,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTGGTCCCAAGCTA",4,48.89,10.63,-0.21,0.08,2.88,1.13,0,">1 nonsynonymous","S41T E141V",2
"lib2","SARS-CoV-2","ATCTGGTGAAAAGAAA",1,43.81,6.23,-4.61,0.66,1.5,1.19,0.02,">1 nonsynonymous","A18E A33S Y165K S200L",4
"lib2","SARS-CoV-2","ATCTGGTTCCATTAGG",1,41.56,9.34,-1.5,0.09,2.79,1.21,0,">1 nonsynonymous","T85E V115W F156S",3
"lib2","SARS-CoV-2","ATCTGTAACCTTACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","L38A G155N T170*",3
"lib2","SARS-CoV-2","ATCTGTACCCTCATAC",9,18.95,NA,NA,NA,NA,NA,NA,"stop","G9* T15L S36M G51R I88V S129I",6
"lib2","SARS-CoV-2","ATCTGTACCCTTGTGG",1,172.88,10.6,-0.24,0.03,2.98,1.02,0,">1 nonsynonymous","R16G T46V",2
"lib2","SARS-CoV-2","ATCTGTACTACCAGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18F T46K S113D Y165R Q176V",5
"lib2","SARS-CoV-2","ATCTGTACTTGTAATA",4,130.36,10.32,-0.51,0.06,2.77,1.04,0,">1 nonsynonymous","D34R Q168W V173D",3
"lib2","SARS-CoV-2","ATCTGTATAGGATATC",2,54.87,10.82,-0.01,0.07,2.92,1.1,0,">1 nonsynonymous","N130K V153L",2
"lib2","SARS-CoV-2","ATCTGTATCTAGAGTC",4,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N G51I K87S V103M N107R",5
"lib2","SARS-CoV-2","ATCTGTCAATCACCAG",21,478.51,10.16,-0.68,0.04,2.71,1.04,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","ATCTGTCACTTTCCAA",4,109.16,8.2,-2.63,0.1,2.45,1.1,0,">1 nonsynonymous","C6N Y119W F160S",3
"lib2","SARS-CoV-2","ATCTGTCAGCAGAGGA",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S K56L P96A V103I C150N",5
"lib2","SARS-CoV-2","ATCTGTCAGCCATGCT",9,185.5,9.48,-1.35,0.09,1.73,1.05,0,">1 nonsynonymous","W23V V37R",2
"lib2","SARS-CoV-2","ATCTGTCCATGCATCG",4,44.11,10.73,-0.11,0.04,2.99,1.03,0,"1 nonsynonymous","N40Y",1
"lib2","SARS-CoV-2","ATCTGTCCTGGGGATA",3,30.2,9.75,-1.09,0.08,2.09,1.02,0,">1 nonsynonymous","Y35R S45R",2
"lib2","SARS-CoV-2","ATCTGTGCGATATCTA",6,15.64,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L60P Y93D E141V N157C",4
"lib2","SARS-CoV-2","ATCTGTGGGAAGATTG",3,9.63,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","F12M Y35N N64L Y165R",4
"lib2","SARS-CoV-2","ATCTGTGGTGAGGCAC",8,100.77,9.94,-0.9,0.04,2.82,1.06,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","ATCTGTTGCCGATAAA",9,87.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V115Y R124C",2
"lib2","SARS-CoV-2","ATCTTAAACAAAGAAA",1,43.92,10.87,0.04,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTAAAGAGGTCTA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","I142* Y175S V182C C195I",4
"lib2","SARS-CoV-2","ATCTTAACAAATGTTA",3,55.14,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y119S Y159D",2
"lib2","SARS-CoV-2","ATCTTAACAGTGAGTT",5,33.94,8.1,-2.74,0.25,1.5,1,0.03,">1 nonsynonymous","W23R R73A S184V",3
"lib2","SARS-CoV-2","ATCTTAAGAAACTGAA",2,26.3,9.79,-1.05,0.21,1.81,1.04,0.01,">1 nonsynonymous","S19K R27E K48N",3
"lib2","SARS-CoV-2","ATCTTAAGACCAGATA",9,120.55,9.84,-1,0.08,2.3,1.02,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","ATCTTAAGGAGAGTAC",2,35.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11I Y21M Y93M Y159N",4
"lib2","SARS-CoV-2","ATCTTAATACGACTAA",7,161.24,8.57,-2.27,0.08,2.83,1.05,0,"1 nonsynonymous","S113H",1
"lib2","SARS-CoV-2","ATCTTAATATAAAAAC",2,17.31,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R25L S41N T63M G86C",4
"lib2","SARS-CoV-2","ATCTTAATATTTACTG",4,20.71,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N40T K56N I80K",3
"lib2","SARS-CoV-2","ATCTTAATCGACAAAC",3,54.2,10.02,-0.81,0.05,2.82,1.09,0,">1 nonsynonymous","T140Y G152T",2
"lib2","SARS-CoV-2","ATCTTAATCGAGATAA",8,83.17,9.65,-1.19,0.04,1.97,1.09,0,">1 nonsynonymous","T3P F12Y A105S",3
"lib2","SARS-CoV-2","ATCTTAATGTCACTTT",1,18.17,9.15,-1.68,0.22,1.55,1.06,0.03,">1 nonsynonymous","P7H A14L F44S E154L",4
"lib2","SARS-CoV-2","ATCTTAATTAATCTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I72V V115F F167*",3
"lib2","SARS-CoV-2","ATCTTACAAGAACATA",13,209.85,10.75,-0.08,0.03,2.96,1.07,0,">1 nonsynonymous","V37L C61R",2
"lib2","SARS-CoV-2","ATCTTACACACCAGAT",2,4.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93N",1
"lib2","SARS-CoV-2","ATCTTACATGATGGAC",5,123.18,10.48,-0.35,0.07,2.87,1.07,0,">1 nonsynonymous","G9Y D90M",2
"lib2","SARS-CoV-2","ATCTTACCTCGCCATA",5,24.98,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L60E N92E",2
"lib2","SARS-CoV-2","ATCTTACGAAGAGGAT",6,1.26,NA,NA,NA,NA,NA,NA,"stop","C49* P54L P161Y P197W",4
"lib2","SARS-CoV-2","ATCTTACGCAATCCGT",2,5.12,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T3K G9P C49N V182L",4
"lib2","SARS-CoV-2","ATCTTACGCACAGAAA",3,42.39,10.55,-0.28,0.03,2.97,1.05,0,">1 nonsynonymous","N40K N120V",2
"lib2","SARS-CoV-2","ATCTTACTCTACTAAG",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S Y91L T148S Y178F",4
"lib2","SARS-CoV-2","ATCTTAGAATTTAAAG",5,0.58,NA,NA,NA,NA,NA,NA,"stop","F156R K198*",2
"lib2","SARS-CoV-2","ATCTTAGCAATCCACT",10,26.77,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N13R L122S V180D",3
"lib2","SARS-CoV-2","ATCTTAGCATAAATGT",3,30.27,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","F44Y D98F N109A F167S",4
"lib2","SARS-CoV-2","ATCTTAGTCGCGAGGT",4,19.76,10.67,-0.17,0.06,2.99,1,0,"1 nonsynonymous","F8M",1
"lib2","SARS-CoV-2","ATCTTAGTCGTTAAAC",5,45.82,10.18,-0.66,0.04,3,1.02,0,">1 nonsynonymous","K56S E154L",2
"lib2","SARS-CoV-2","ATCTTAGTGGCCGCGT",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A G86T C158R",3
"lib2","SARS-CoV-2","ATCTTATAACATAGAG",2,54.76,10.91,0.07,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTATAACGCTTTC",28,4.82,NA,NA,NA,NA,NA,NA,"stop","G9S S41L F99* S113V",4
"lib2","SARS-CoV-2","ATCTTATATAATCCGT",6,46.38,10.87,0.03,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTATATATCTCAC",2,23.27,6,-4.84,0.99,3,1.2,0.01,">1 nonsynonymous","S29W F70Y",2
"lib2","SARS-CoV-2","ATCTTATATGATTAAA",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K D98M S113L",3
"lib2","SARS-CoV-2","ATCTTATCATAGATAA",2,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N F12C T46L C102Q Q144R P149S L183D",7
"lib2","SARS-CoV-2","ATCTTATGATACATAT",7,57.42,9.33,-1.51,0.07,1.98,1.1,0,">1 nonsynonymous","S45D D137N",2
"lib2","SARS-CoV-2","ATCTTATGGAAAAAAA",4,31.44,6.6,-4.24,0.79,1.5,1.2,0.06,">1 nonsynonymous","C49E C61A N130R Q163R",4
"lib2","SARS-CoV-2","ATCTTATTAAAAATGA",1,10.9,9.45,-1.39,0.14,2.87,1.16,0.01,">1 nonsynonymous","N1P Y119N",2
"lib2","SARS-CoV-2","ATCTTATTCATCAAGT",5,124.25,9.54,-1.3,0.05,2.78,1.05,0,">1 nonsynonymous","N1F I138P G166A",3
"lib2","SARS-CoV-2","ATCTTATTGATCCTTA",9,5.86,NA,NA,NA,NA,NA,NA,"stop","S19* F99T S129M",3
"lib2","SARS-CoV-2","ATCTTATTTTCCCCCA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","S19P C31T V37* K87A Y121L F167S L188M T201S",8
"lib2","SARS-CoV-2","ATCTTCAATGCAAATG",3,125.98,10.75,-0.08,0.05,2.92,1.09,0,">1 nonsynonymous","F62Y L95V",2
"lib2","SARS-CoV-2","ATCTTCAGACCTTATC",21,196.59,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G51R N58L D112Y",3
"lib2","SARS-CoV-2","ATCTTCAGTAGTTACC",8,71.16,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Q84D W106Y C158R",3
"lib2","SARS-CoV-2","ATCTTCATAAGGCCGT",4,35.87,10.07,-0.76,0.11,2.62,1.02,0,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","ATCTTCATATAATTTG",7,64.39,10.91,0.08,0.05,2.92,1.08,0,">1 nonsynonymous","L5W V37E",2
"lib2","SARS-CoV-2","ATCTTCATGAACTAGA",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I L57R Q84A Y123P S139C G155R",6
"lib2","SARS-CoV-2","ATCTTCATTATTCAAC",18,233.37,10.96,0.13,0.05,2.96,1.05,0,">1 nonsynonymous","V37F S43L G152R",3
"lib2","SARS-CoV-2","ATCTTCATTTATCGGA",1,50.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V11S C158P",2
"lib2","SARS-CoV-2","ATCTTCCAGCTGTAAA",2,46.89,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S36Q G86D F99L G166R V181G E186K",6
"lib2","SARS-CoV-2","ATCTTCCCCTCACGCA",13,40.19,6,-4.84,2,1.5,1.23,0.01,"1 nonsynonymous","F70P",1
"lib2","SARS-CoV-2","ATCTTCCCGTTTACAG",1,0.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTCCCTACACTAA",1,3.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","ATCTTCCCTCATGACA",9,67.8,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T3S V37N A67T T85V V103L V173S",6
"lib2","SARS-CoV-2","ATCTTCGAGAGAATAT",2,26.96,10.7,-0.14,0.07,2.97,1.07,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","ATCTTCGCTCGAGAAA",3,6.84,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F70N I104S P133A E141S P149S",5
"lib2","SARS-CoV-2","ATCTTCGGTCTGTATT",5,57.62,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I80T E135V G166V S184L",4
"lib2","SARS-CoV-2","ATCTTCGTTGTCGACA",2,13.67,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","W106P F156E",2
"lib2","SARS-CoV-2","ATCTTCTACATAAGTT",4,18.08,10.7,-0.14,0.09,3,1.01,0,">1 nonsynonymous","C61F S129G",2
"lib2","SARS-CoV-2","ATCTTCTAGTCAAACA",3,23.94,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12R Y39D C49Q E141M",4
"lib2","SARS-CoV-2","ATCTTCTATTACGACC",1,15.46,10.91,0.08,0.09,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTCTCATGGAACA",20,161.6,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R27S L95C P149A N157W",4
"lib2","SARS-CoV-2","ATCTTCTTAAGAGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F I72Q D98F N157Y",4
"lib2","SARS-CoV-2","ATCTTCTTACCTCTGC",12,90.22,9.93,-0.91,0.1,2.13,1.07,0,">1 nonsynonymous","S41T Y91G",2
"lib2","SARS-CoV-2","ATCTTGAAAGTGGTAC",1,65.79,10.26,-0.57,0.05,2.91,1,0,">1 nonsynonymous","N13M T201I",2
"lib2","SARS-CoV-2","ATCTTGAACAATCAAA",2,26.48,8.83,-2.01,0.07,3,1.07,0,">1 nonsynonymous","V65A F156D",2
"lib2","SARS-CoV-2","ATCTTGAACGATCATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","ATCTTGAATCGAGGTT",17,234.2,10.46,-0.37,0.03,2.94,1.06,0,">1 nonsynonymous","S19H D59R P197L",3
"lib2","SARS-CoV-2","ATCTTGAATGACTGTT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V K48E P82S K87N V103N",5
"lib2","SARS-CoV-2","ATCTTGACCAAGGCTA",8,49.64,9.53,-1.31,0.1,1.93,1.04,0,"1 nonsynonymous","F12K",1
"lib2","SARS-CoV-2","ATCTTGACCACAACTA",2,23.63,9.77,-1.07,0.11,2.29,1.05,0.01,">1 nonsynonymous","F12W V153F",2
"lib2","SARS-CoV-2","ATCTTGACGGAAGCCC",7,31.17,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3M V103S Q144P",3
"lib2","SARS-CoV-2","ATCTTGACTGACAACA",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M I88Y I104N K132Q P177L",5
"lib2","SARS-CoV-2","ATCTTGAGATTATAAA",6,20.56,8.21,-2.63,0.28,1.5,1.09,0.02,">1 nonsynonymous","Y66A W106K",2
"lib2","SARS-CoV-2","ATCTTGAGGATATCAA",1,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","ATCTTGAGTGCATTAT",7,65.3,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","P177K E186S S200R",3
"lib2","SARS-CoV-2","ATCTTGCAATTTATCT",3,42.69,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y35H W106K Y175E",3
"lib2","SARS-CoV-2","ATCTTGCGAACTCGAA",4,35.89,9.88,-0.96,0.06,1.96,1.02,0,">1 nonsynonymous","T3I E10K F44R",3
"lib2","SARS-CoV-2","ATCTTGCTTCTGTTCG",1,10.72,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T55F D97E R127E N157L L183D",5
"lib2","SARS-CoV-2","ATCTTGCTTGACAGAC",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F R16C V52F Y119K S139P",5
"lib2","SARS-CoV-2","ATCTTGGCGGAAGTTG",6,84.31,10.78,-0.06,0.04,2.96,1.04,0,">1 nonsynonymous","A14S V65I L187K T201N",4
"lib2","SARS-CoV-2","ATCTTGGTCATTTGAA",8,149.51,10.81,-0.03,0.03,2.95,1.04,0,">1 nonsynonymous","S36N Q144S",2
"lib2","SARS-CoV-2","ATCTTGTAACGGTCAA",3,110.88,10.59,-0.24,0.04,2.91,1.09,0,"1 nonsynonymous","T85D",1
"lib2","SARS-CoV-2","ATCTTGTAACTAACAT",3,14.29,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F99D G155L",2
"lib2","SARS-CoV-2","ATCTTGTATCGTACGG",1,5.77,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C102R A145S Y178F",3
"lib2","SARS-CoV-2","ATCTTGTCAATCCGCT",1,108.37,7.29,-3.55,0.16,1.5,1.11,0.01,">1 nonsynonymous","P7T K56H T63A Y175K T201V",5
"lib2","SARS-CoV-2","ATCTTGTCATGCACCT",5,2.07,NA,NA,NA,NA,NA,NA,"stop","A33L G51I N58D S113R Q144L P161* N171K",7
"lib2","SARS-CoV-2","ATCTTGTGCCGCTAAC",3,0.23,NA,NA,NA,NA,NA,NA,"stop","I142* T201S",2
"lib2","SARS-CoV-2","ATCTTGTGGCCCAGCG",6,113.73,10.11,-0.72,0.03,2.81,1.02,0,">1 nonsynonymous","S36F I142F S200T",3
"lib2","SARS-CoV-2","ATCTTGTTGAATGAGT",1,19,10.75,-0.09,0.12,2.72,1.3,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTTAAAACAAATC",6,48.09,9.37,-1.47,0.07,1.79,1.07,0,"1 nonsynonymous","C102W",1
"lib2","SARS-CoV-2","ATCTTTAAATATCCTC",3,68.24,9.2,-1.64,0.06,2.78,1.07,0,">1 nonsynonymous","T55I A105S K114P V173I",4
"lib2","SARS-CoV-2","ATCTTTAAATTATTAC",3,63.57,10.95,0.11,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTTAACTCTCAAC",2,44.77,9.9,-0.93,0.15,2.3,1.05,0.01,">1 nonsynonymous","R27D D97V W106F T201I",4
"lib2","SARS-CoV-2","ATCTTTAATGAATCTA",4,27.16,8,-2.84,0.16,2.27,1.05,0.01,">1 nonsynonymous","V37A N64R G172A",3
"lib2","SARS-CoV-2","ATCTTTAATGGCACAT",2,90.94,10.85,0.02,0.07,2.87,1.15,0,">1 nonsynonymous","I138L P197A",2
"lib2","SARS-CoV-2","ATCTTTACCAACCTAA",1,0.79,NA,NA,NA,NA,NA,NA,"stop","N40P N64V K87* S113T A145F S184L",6
"lib2","SARS-CoV-2","ATCTTTAGCACGCACT",2,35.47,10.79,-0.04,0.09,2.88,1.11,0,">1 nonsynonymous","L5R T100V",2
"lib2","SARS-CoV-2","ATCTTTAGTTAACAAA",2,20.89,9.96,-0.88,0.12,2.03,1.12,0.01,">1 nonsynonymous","A14W S200A",2
"lib2","SARS-CoV-2","ATCTTTATAAAAAATC",7,46.57,8.34,-2.5,0.2,1.5,1.07,0.02,">1 nonsynonymous","T3E E10F S45L G146S",4
"lib2","SARS-CoV-2","ATCTTTATCAAAAAAG",2,13.37,10.51,-0.33,0.38,2.17,1.1,0.06,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTTATGACCAATT",8,107.8,10.7,-0.14,0.04,2.82,1.18,0,"1 nonsynonymous","T63V",1
"lib2","SARS-CoV-2","ATCTTTATTCCCCGAA",1,56.26,9.47,-1.36,0.09,2.23,1.13,0,">1 nonsynonymous","E76K N110E L122H T201E",4
"lib2","SARS-CoV-2","ATCTTTATTGATTAAA",7,44.56,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T3A S29C N107S Y119R R136N F167G V173R",7
"lib2","SARS-CoV-2","ATCTTTCTAATTTAAA",3,40.69,10.58,-0.26,0.06,2.84,1.11,0,">1 nonsynonymous","P133A N171S",2
"lib2","SARS-CoV-2","ATCTTTCTATAAAAAT",5,22.43,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33D N92S F99Y N107C A190S",5
"lib2","SARS-CoV-2","ATCTTTCTGACACTAA",9,240.74,6,-4.84,1.86,1.5,1.11,0,">1 nonsynonymous","F12I N130W G172A",3
"lib2","SARS-CoV-2","ATCTTTGATCAACGAC",3,94.94,10.74,-0.09,0.03,2.92,1.11,0,">1 nonsynonymous","T3E T55D T85M F160R",4
"lib2","SARS-CoV-2","ATCTTTGATCTCAAAG",4,12.95,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T85S W106R",2
"lib2","SARS-CoV-2","ATCTTTGCGCTCAACA",5,36.49,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","Y159T",1
"lib2","SARS-CoV-2","ATCTTTGCTGACCTTT",3,66.78,10.26,-0.58,0.08,2.8,1.08,0,">1 nonsynonymous","V103I S129H E141A",3
"lib2","SARS-CoV-2","ATCTTTGCTTACATCG",8,305.86,9.68,-1.16,0.05,1.99,1.04,0,">1 nonsynonymous","E10T N64Q V173S T201E",4
"lib2","SARS-CoV-2","ATCTTTGTCTAAATAC",1,6.23,10.3,-0.53,0.09,2.78,1,0.01,">1 nonsynonymous","P54L D97T L131V P169R",4
"lib2","SARS-CoV-2","ATCTTTGTGCAAAGAG",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71G Y178N",2
"lib2","SARS-CoV-2","ATCTTTTAAAAAACGG",5,92.95,10.11,-0.73,0.04,2.85,1.07,0,">1 nonsynonymous","R27W F160I",2
"lib2","SARS-CoV-2","ATCTTTTAAAAGGAAG",7,46.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12K V181G",2
"lib2","SARS-CoV-2","ATCTTTTAATCAGAAA",1,33.28,10.97,0.14,0.13,2.78,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","ATCTTTTATCACATAT",3,39.67,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12N Q176W",2
"lib2","SARS-CoV-2","ATCTTTTATTGCGACA",1,35.32,10.91,0.07,0.09,2.91,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","ATCTTTTGAGTTACCG",2,3.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","ATCTTTTGGGACCAGA",2,60.62,10.66,-0.18,0.04,2.92,1.1,0,">1 nonsynonymous","L95V L122W",2
"lib2","SARS-CoV-2","ATGAAAAAAAGTCAAA",8,73.08,8.81,-2.02,0.13,1.54,1.08,0.01,">1 nonsynonymous","S36L W106V T148Y",3
"lib2","SARS-CoV-2","ATGAAAAAAAGTGGTC",8,298.44,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T100S Y178G",2
"lib2","SARS-CoV-2","ATGAAAAAAATCCACG",2,31.82,10.87,0.03,0.06,2.96,1.08,0,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","ATGAAAAAACCGACAA",4,1.18,NA,NA,NA,NA,NA,NA,"stop","N92T D98* T148I T201K",4
"lib2","SARS-CoV-2","ATGAAAAAACTCATCC",2,14.11,6,-4.84,1.15,1.5,1.12,0.02,">1 nonsynonymous","C61E P82S G146C",3
"lib2","SARS-CoV-2","ATGAAAAACGATCATT",3,26.28,9.49,-1.35,0.13,1.94,1.06,0.01,"1 nonsynonymous","F12K",1
"lib2","SARS-CoV-2","ATGAAAAACTGGCCGA",8,104.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19L A42R N92I S108T C150D G152I",6
"lib2","SARS-CoV-2","ATGAAAAAGCACTTGT",4,55.52,8.37,-2.46,0.29,1.5,1.01,0.03,">1 nonsynonymous","R127W V173A",2
"lib2","SARS-CoV-2","ATGAAAAATACAGATG",4,2.5,NA,NA,NA,NA,NA,NA,"stop","G9T E154* T170R",3
"lib2","SARS-CoV-2","ATGAAAAATACCTCTG",2,5.43,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13S T55A P133W Y143R",4
"lib2","SARS-CoV-2","ATGAAAACAAATAATC",4,51.1,10.94,0.11,0.05,2.97,1.02,0,"1 nonsynonymous","P54H",1
"lib2","SARS-CoV-2","ATGAAAACACGTCCAA",4,74.63,10.73,-0.11,0.06,2.94,1.05,0,">1 nonsynonymous","V37L F44W N120Y",3
"lib2","SARS-CoV-2","ATGAAAACATCCGCAC",2,21.63,9.91,-0.93,0.07,2.97,1,0,">1 nonsynonymous","N1R P7K L125N",3
"lib2","SARS-CoV-2","ATGAAAACCAACCGGT",2,15.4,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","E154F T170R V180H",3
"lib2","SARS-CoV-2","ATGAAAACCGGACCAG",3,63.77,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2K L57K K94E Q176L",4
"lib2","SARS-CoV-2","ATGAAAACCGGTAATT",7,195.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50L F62V G117H Y159N",4
"lib2","SARS-CoV-2","ATGAAAACGACAGATT",2,9.28,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","C6S L95R I104F F160V",4
"lib2","SARS-CoV-2","ATGAAAACGCCAAAAA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94E Q176F L183S",3
"lib2","SARS-CoV-2","ATGAAAACGCGCATAA",2,19.86,9.94,-0.89,0.07,2.76,1.02,0,">1 nonsynonymous","D75K I104T",2
"lib2","SARS-CoV-2","ATGAAAACGCGCTGTC",3,64.45,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D112S N120R R127T",3
"lib2","SARS-CoV-2","ATGAAAACTACAACGA",5,3.37,NA,NA,NA,NA,NA,NA,"stop","R27* K56Y T63W Q84T R124L G146R",6
"lib2","SARS-CoV-2","ATGAAAACTCTTGCTA",2,8.03,NA,NA,NA,NA,NA,NA,"stop","A22* E76S T100L N107E",4
"lib2","SARS-CoV-2","ATGAAAAGATAAGCAA",7,95.67,9.4,-1.44,0.06,2.57,1.05,0,">1 nonsynonymous","S43N I88T",2
"lib2","SARS-CoV-2","ATGAAAAGCTCTCTTA",13,137.81,10.8,-0.04,0.03,2.93,1.09,0,"1 nonsynonymous","F62C",1
"lib2","SARS-CoV-2","ATGAAAAGGGCTATCA",2,8.7,10.05,-0.79,0.13,2.44,1,0.01,">1 nonsynonymous","S36F Y119C",2
"lib2","SARS-CoV-2","ATGAAAATAATAAATA",6,57.41,6,-4.84,0.84,1.5,1.12,0.01,">1 nonsynonymous","F12A G116C G166S",3
"lib2","SARS-CoV-2","ATGAAAATACGCAACA",7,230.19,9.86,-0.98,0.06,2.45,1.07,0,">1 nonsynonymous","S69Q Q168S",2
"lib2","SARS-CoV-2","ATGAAAATAGCCTAAT",4,48.52,10.58,-0.26,0.02,2.98,1.03,0,"1 nonsynonymous","R78F",1
"lib2","SARS-CoV-2","ATGAAAATATCGACAT",4,9.12,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D34P K56S Q84H A105P D112R",5
"lib2","SARS-CoV-2","ATGAAAATCAACGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N58* F99H",2
"lib2","SARS-CoV-2","ATGAAAATCACGAATG",2,21.4,9.97,-0.87,0.1,2.66,1.13,0.01,">1 nonsynonymous","A105C Q168R",2
"lib2","SARS-CoV-2","ATGAAAATCACTACAC",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M Y50L N107A",3
"lib2","SARS-CoV-2","ATGAAAATCTTCATCA",5,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I N58L V103Y",3
"lib2","SARS-CoV-2","ATGAAAATTACAATTC",5,2.29,NA,NA,NA,NA,NA,NA,"stop","D68L T201*",2
"lib2","SARS-CoV-2","ATGAAACAAAACATCA",16,253.85,10.37,-0.46,0.03,2.93,1.05,0,">1 nonsynonymous","E10D Y35I A42V W106M",4
"lib2","SARS-CoV-2","ATGAAACAATCCATGT",2,22.86,10.44,-0.4,0.07,2.89,1.1,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","ATGAAACAATCGCTGC",1,0.1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGAAACAATTAATCA",6,76.06,6,-4.84,1.52,1.5,1.1,0.01,">1 nonsynonymous","I2E L60G I88V L95S",4
"lib2","SARS-CoV-2","ATGAAACACAAAGCCT",7,85.06,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A18Q V103N G152Q P161C",4
"lib2","SARS-CoV-2","ATGAAACAGAAACTAT",4,29.55,8.32,-2.52,0.14,2.16,1.03,0.01,">1 nonsynonymous","T100S G117R S147Y",3
"lib2","SARS-CoV-2","ATGAAACAGCATGACT",7,22.43,10.74,-0.1,0.09,2.95,1.07,0,">1 nonsynonymous","T140Q T148L",2
"lib2","SARS-CoV-2","ATGAAACATACTACCG",1,18.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D90I G101L Y119K V173S",4
"lib2","SARS-CoV-2","ATGAAACATCACAGAC",1,10.27,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3D P82D",2
"lib2","SARS-CoV-2","ATGAAACATTAATACG",4,99.21,10.11,-0.73,0.05,2.9,1,0,">1 nonsynonymous","K132T G152A F156W",3
"lib2","SARS-CoV-2","ATGAAACCAACGTTAC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F A18F I104N P197L",4
"lib2","SARS-CoV-2","ATGAAACCAGCCATCC",3,5.39,NA,NA,NA,NA,NA,NA,"stop","G9* F47V G86Y E135A P161I",5
"lib2","SARS-CoV-2","ATGAAACCAGGAAAGG",3,55.42,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","E10F K94T Y159R",3
"lib2","SARS-CoV-2","ATGAAACCATAAAAGA",1,56.09,8.66,-2.18,0.12,2.63,1.05,0.01,">1 nonsynonymous","K87Y L125Y T140A Y165H",4
"lib2","SARS-CoV-2","ATGAAACCTAATACCC",3,23.67,11.01,0.17,0.17,2.56,1.15,0.01,"synonymous","",0
"lib2","SARS-CoV-2","ATGAAACCTCTTTGAA",2,51.64,10.79,-0.05,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAAACGAACCAGAG",5,18.32,6.31,-4.52,0.8,1.5,1.13,0.02,">1 nonsynonymous","A33S G86T F99N",3
"lib2","SARS-CoV-2","ATGAAACGGCGTTGCC",3,80.85,9.86,-0.97,0.07,2.19,1.06,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","ATGAAACGGGTTATGA",9,181.87,9.79,-1.05,0.06,2.41,1.05,0,">1 nonsynonymous","E10K L38F T140W",3
"lib2","SARS-CoV-2","ATGAAACGTATATTGA",12,81.06,6.2,-4.63,0.9,1.5,1.27,0.03,">1 nonsynonymous","G86R S139L K198L",3
"lib2","SARS-CoV-2","ATGAAACTCTAATCAG",1,14.75,8.82,-2.02,0.09,2.85,1.06,0,">1 nonsynonymous","S29P N118S I138K",3
"lib2","SARS-CoV-2","ATGAAACTCTTTGGTG",5,15.55,6.24,-4.59,1.13,1.5,1.2,0.04,">1 nonsynonymous","C61M G83H L131S Y143F",4
"lib2","SARS-CoV-2","ATGAAACTCTTTTTTT",6,42.11,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N4G F8C P169N Y175T",4
"lib2","SARS-CoV-2","ATGAAACTGATGCTAA",2,26.85,10.56,-0.28,0.07,2.93,1.02,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","ATGAAACTGCCGTCAC",15,336.71,9.4,-1.44,0.03,2.9,1.11,0,">1 nonsynonymous","Y119F S129C",2
"lib2","SARS-CoV-2","ATGAAAGAAATGTACT",2,27.14,9.14,-1.69,0.23,1.72,1.14,0.02,">1 nonsynonymous","A14L W106K",2
"lib2","SARS-CoV-2","ATGAAAGAACTTTATA",14,45.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N G174C",2
"lib2","SARS-CoV-2","ATGAAAGATTATGAAC",1,7.65,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A18T F47L P54R C61P I88E G101L R136F A190Y",8
"lib2","SARS-CoV-2","ATGAAAGATTGAAAAT",1,15.04,6,-4.84,2,3,1.1,0,">1 nonsynonymous","D90K N107Y S129F",3
"lib2","SARS-CoV-2","ATGAAAGCCACGTCGT",9,49.07,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L60H I88F D137K",3
"lib2","SARS-CoV-2","ATGAAAGCGATGTACT",1,20.19,9.19,-1.65,0.06,2.8,1.02,0.01,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","ATGAAAGGAAGTCTAA",2,80.09,9.05,-1.78,0.07,2.78,1.16,0,">1 nonsynonymous","T46L G117T F160S",3
"lib2","SARS-CoV-2","ATGAAAGGACAATTAG",1,22.2,10.13,-0.71,0.04,3,1.05,0,">1 nonsynonymous","K87C N120L",2
"lib2","SARS-CoV-2","ATGAAAGGCTAGCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","D97E V103* S129K",3
"lib2","SARS-CoV-2","ATGAAAGGTACACGAT",3,60.21,10.46,-0.37,0.04,2.89,1.07,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","ATGAAAGGTGATGCCG",10,69.97,8.63,-2.2,0.17,1.5,1.01,0.02,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","ATGAAAGTCATAGTTT",14,179.86,9.55,-1.29,0.07,2.46,1.06,0,">1 nonsynonymous","Q79E T100C N107R",3
"lib2","SARS-CoV-2","ATGAAAGTCTACTCAA",4,104.81,8.52,-2.31,0.11,2.12,1.1,0,">1 nonsynonymous","L60P D98H L125C",3
"lib2","SARS-CoV-2","ATGAAAGTTAACTCGG",3,23.59,7.55,-3.28,0.24,1.69,1.02,0.02,">1 nonsynonymous","G74M S129Y T170W",3
"lib2","SARS-CoV-2","ATGAAAGTTACGCACA",8,116.53,9.69,-1.15,0.07,2.44,1.05,0,">1 nonsynonymous","G152S Y178I",2
"lib2","SARS-CoV-2","ATGAAAGTTGAAGATA",3,21.42,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6R Y35S P133T P149M C158D S184L",6
"lib2","SARS-CoV-2","ATGAAAGTTGATTTAG",5,54.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50F V52I P96S A145T P161C",5
"lib2","SARS-CoV-2","ATGAAATAAACAATGA",8,28.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L T85H L183K",3
"lib2","SARS-CoV-2","ATGAAATAATATTTTG",9,165.88,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14S P82R N92Y F99M S129T F156V P177F",7
"lib2","SARS-CoV-2","ATGAAATAATTCGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K G9A A89L D90Y E135T V153N",6
"lib2","SARS-CoV-2","ATGAAATATATTATTA",5,0.9,NA,NA,NA,NA,NA,NA,"stop","A14C A33L D75G R78H G146* G152C",6
"lib2","SARS-CoV-2","ATGAAATATTAGCGAG",21,352.25,9.8,-1.04,0.07,2.37,1.04,0,">1 nonsynonymous","A14E C61F D97I K114M",4
"lib2","SARS-CoV-2","ATGAAATCAAGTTGCG",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I F99N F126Q",3
"lib2","SARS-CoV-2","ATGAAATCCCTCGGAT",2,28.42,6.9,-3.93,0.34,1.5,1.14,0.02,">1 nonsynonymous","A89K F126L",2
"lib2","SARS-CoV-2","ATGAAATCCGTAAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A I72S S113D",3
"lib2","SARS-CoV-2","ATGAAATGAAGATAGA",1,50.13,6.18,-4.65,0.41,1.5,1.11,0.01,">1 nonsynonymous","F17H P96I N120R F167A C195D",5
"lib2","SARS-CoV-2","ATGAAATGAAGCCGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","V77W K128* R136P P149H",4
"lib2","SARS-CoV-2","ATGAAATGCATCACTT",1,30.44,10.7,-0.14,0.09,2.87,1.15,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","ATGAAATTATATACGA",13,152.6,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","Y35M R124W G196I",3
"lib2","SARS-CoV-2","ATGAAATTCCTTAGGT",4,57.45,10.19,-0.64,0.06,2.71,1.07,0,">1 nonsynonymous","A42E N64Y D98H R136M",4
"lib2","SARS-CoV-2","ATGAAATTCTTTACAC",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96K C158T",2
"lib2","SARS-CoV-2","ATGAAATTTAAGTCAT",1,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96C N107D L162K Q168G",4
"lib2","SARS-CoV-2","ATGAACAAAGTGAAAA",7,72,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","K87T F99N L122S P177Q",4
"lib2","SARS-CoV-2","ATGAACAACTTTACAC",3,60.81,10.9,0.07,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAACAAGCAGAAAA",9,1.31,NA,NA,NA,NA,NA,NA,"stop","T15D A22W Y35S G86F Y121S Y165S S184*",7
"lib2","SARS-CoV-2","ATGAACAATAGCACAA",3,7.6,10.27,-0.57,0.07,2.8,1.24,0,">1 nonsynonymous","V37L A81S V173A",3
"lib2","SARS-CoV-2","ATGAACAATATTTATA",5,106.12,10.02,-0.81,0.07,2.79,1.08,0,">1 nonsynonymous","N64L R78L Q168R",3
"lib2","SARS-CoV-2","ATGAACAATTAAACGC",16,92.34,8.92,-1.91,0.08,1.73,1.11,0,">1 nonsynonymous","K26L W106R N151M G174A",4
"lib2","SARS-CoV-2","ATGAACACAAAGAATT",6,29.11,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T15P K114H F134Y C158P Y178V",5
"lib2","SARS-CoV-2","ATGAACACAGACCAAG",3,26.75,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","G9W R127W Q176R T201S",4
"lib2","SARS-CoV-2","ATGAACAGAACAAACT",4,97.45,6,-4.84,2,1.5,1.33,0.02,">1 nonsynonymous","C6I D112Q K128A",3
"lib2","SARS-CoV-2","ATGAACAGATATGTGT",13,75.39,6,-4.84,2,2.22,1.12,0,">1 nonsynonymous","K94T T170E",2
"lib2","SARS-CoV-2","ATGAACAGGAAAAAAT",2,8.98,11.01,0.18,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAACAGGAAAGAAC",1,8.56,10.9,0.07,0.12,2.91,1.08,0.01,"1 nonsynonymous","F8Y",1
"lib2","SARS-CoV-2","ATGAACAGGACTCATT",2,25.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83P N120Q E186N",3
"lib2","SARS-CoV-2","ATGAACATAGAAATTC",14,105.6,9.81,-1.03,0.08,2.39,1.13,0,">1 nonsynonymous","C6E S41P",2
"lib2","SARS-CoV-2","ATGAACATAGATATGA",9,235.74,8.8,-2.03,0.05,2.87,1.05,0,">1 nonsynonymous","N4L T170L",2
"lib2","SARS-CoV-2","ATGAACATGACAACCG",6,133.4,10.59,-0.24,0.06,2.95,1.04,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","ATGAACATGCTTTTAG",5,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P C49Y R179S T201K",4
"lib2","SARS-CoV-2","ATGAACCAAATTCGTA",8,80.8,10.75,-0.08,0.03,2.96,1.07,0,"1 nonsynonymous","T3Y",1
"lib2","SARS-CoV-2","ATGAACCACATAAAAT",2,2.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","ATGAACCATAAAACCA",17,414.69,10.8,-0.03,0.03,2.92,1.09,0,"1 nonsynonymous","T3P",1
"lib2","SARS-CoV-2","ATGAACCCCAAAGATG",9,84.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A42G K48I P82Q Y93I G174S",5
"lib2","SARS-CoV-2","ATGAACCCCTGCTCTA",19,220.59,10.73,-0.1,0.02,2.94,1.06,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","ATGAACCGCTATAGCA",4,92.46,10.19,-0.64,0.05,2.39,1,0,">1 nonsynonymous","L5S L57H N109K N120D",4
"lib2","SARS-CoV-2","ATGAACCTACAAACTA",7,91.06,9.75,-1.09,0.03,2.89,1.07,0,">1 nonsynonymous","I2S N40L K87S I142V",4
"lib2","SARS-CoV-2","ATGAACCTAGTCACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","W106M P161*",2
"lib2","SARS-CoV-2","ATGAACCTTCTGTATT",8,3.63,NA,NA,NA,NA,NA,NA,"stop","R27F Y91M F126V G166* L187Y",5
"lib2","SARS-CoV-2","ATGAACGAAGAACGGG",10,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M K132L Q144T",3
"lib2","SARS-CoV-2","ATGAACGACAAACGGA",5,91.7,10.19,-0.64,0.04,2.89,1.05,0,">1 nonsynonymous","Y35D T201L",2
"lib2","SARS-CoV-2","ATGAACGAGCCTAAAC",2,13.66,8.62,-2.21,0.16,2,1.04,0.01,">1 nonsynonymous","V11K T55S T148I N151E T201Y",5
"lib2","SARS-CoV-2","ATGAACGAGTAGACTC",3,61.99,10.09,-0.75,0.04,2.97,1.03,0,">1 nonsynonymous","N118T E154S K199H",3
"lib2","SARS-CoV-2","ATGAACGCATATCTGG",1,34.87,7.76,-3.08,0.17,1.8,1.1,0.01,">1 nonsynonymous","L57I S113Y L188M",3
"lib2","SARS-CoV-2","ATGAACGCCAGACTTG",9,116.04,10.88,0.04,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAACGCTGCTATGT",9,112.8,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37E I72A P96S L131G",4
"lib2","SARS-CoV-2","ATGAACGGAACACAGG",5,16.73,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","T3L S19L G152S T170W",4
"lib2","SARS-CoV-2","ATGAACGGACCGGTCT",2,128.9,10.62,-0.21,0.04,2.93,1.07,0,">1 nonsynonymous","D34R L60F N120Q",3
"lib2","SARS-CoV-2","ATGAACGGCAGTATCT",2,0.86,NA,NA,NA,NA,NA,NA,"stop","S53V N110* G174S",3
"lib2","SARS-CoV-2","ATGAACGGCTATCTTT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M I88V V103G N107S D137S",5
"lib2","SARS-CoV-2","ATGAACGGTACACAAA",3,32.38,10.66,-0.18,0.08,2.85,1.15,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","ATGAACGTTAGAAAAG",6,23.98,6,-4.84,2,3,1.39,0.02,">1 nonsynonymous","S45G Y50A P133R S139T",4
"lib2","SARS-CoV-2","ATGAACGTTTACCCCG",3,19.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A18T N58E P82R L122F",4
"lib2","SARS-CoV-2","ATGAACGTTTTGCATA",8,371,9.59,-1.25,0.03,2.91,1.02,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","ATGAACTAACATTGCG",4,28.63,6,-4.84,1.28,1.5,1.13,0.02,">1 nonsynonymous","N1S F167T",2
"lib2","SARS-CoV-2","ATGAACTAATATCAAG",5,54.65,10.61,-0.23,0.03,2.9,1.04,0,">1 nonsynonymous","A42S T201R",2
"lib2","SARS-CoV-2","ATGAACTACAAAAATT",10,1.58,NA,NA,NA,NA,NA,NA,"stop","K48N A89S K128R S147* L183Q",5
"lib2","SARS-CoV-2","ATGAACTACAACCTAT",9,88.18,8.35,-2.48,0.3,1.5,1,0.04,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","ATGAACTACACATTTC",3,111.02,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36A T148C P177L",3
"lib2","SARS-CoV-2","ATGAACTCACACGGTT",8,171.16,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17N P82K T100F Y175E",4
"lib2","SARS-CoV-2","ATGAACTCGGGTATTT",5,16.03,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S41D L60Q N107T N120D I142S",5
"lib2","SARS-CoV-2","ATGAACTGAAGTGACA",1,13.74,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","G83C E135S N157I",3
"lib2","SARS-CoV-2","ATGAACTGGTACTGTA",2,21.63,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F17R C61L F99Q",3
"lib2","SARS-CoV-2","ATGAACTTTATAAGTA",8,4.71,NA,NA,NA,NA,NA,NA,"stop","C6M Q79* I88C F134Y",4
"lib2","SARS-CoV-2","ATGAAGAAACAAAGCC",3,72.88,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","V37G L95T I104S",3
"lib2","SARS-CoV-2","ATGAAGAAACCTCCCT",1,19.82,9.21,-1.63,0.15,2.49,1,0.01,">1 nonsynonymous","D90G L122M K128L G166A",4
"lib2","SARS-CoV-2","ATGAAGAAACGCCACA",3,25.11,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","T46Y K56L I72F K87C A105L G172M F185V",7
"lib2","SARS-CoV-2","ATGAAGAAATAAAAAA",5,34.69,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","G83M V181G",2
"lib2","SARS-CoV-2","ATGAAGAAATATGGCA",1,30.81,9.3,-1.53,0.1,2.03,1.01,0,">1 nonsynonymous","W106C S147V",2
"lib2","SARS-CoV-2","ATGAAGAACAGTACGA",4,25.93,6,-4.83,0.32,2.87,1.08,0,">1 nonsynonymous","A14F V20K L122G G146L G174Q",5
"lib2","SARS-CoV-2","ATGAAGAAGCATGGTC",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y N64V L162F",3
"lib2","SARS-CoV-2","ATGAAGAAGTCACAAG",3,57.06,6.19,-4.65,0.67,1.5,1.14,0.02,">1 nonsynonymous","L5M T55H D68L",3
"lib2","SARS-CoV-2","ATGAAGACGTGGATAT",4,148.84,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S69G G101L G152V",3
"lib2","SARS-CoV-2","ATGAAGATAAATGCTA",2,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46W D68M D98E N151D",4
"lib2","SARS-CoV-2","ATGAAGATTCTAGGGG",5,3.18,NA,NA,NA,NA,NA,NA,"stop","G116E F167*",2
"lib2","SARS-CoV-2","ATGAAGCATGGCTTGT",9,139.91,10.39,-0.44,0.04,2.88,1.09,0,">1 nonsynonymous","G83C G155S",2
"lib2","SARS-CoV-2","ATGAAGCATTGTATAA",2,36.19,10.33,-0.5,0.06,2.95,1.08,0,">1 nonsynonymous","T170Q K198T",2
"lib2","SARS-CoV-2","ATGAAGCCAGCATGAT",1,12.27,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","D68M S129F Y143D G172L",4
"lib2","SARS-CoV-2","ATGAAGCCCCACCAAT",3,15.18,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L38S D98V",2
"lib2","SARS-CoV-2","ATGAAGCCTGCATTGT",3,15,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F12H R25S G101V",3
"lib2","SARS-CoV-2","ATGAAGCGATACTAAT",1,41.58,10.8,-0.03,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAAGCTCCAATGCT",2,7.37,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","D112G R127A",2
"lib2","SARS-CoV-2","ATGAAGCTCTGTTATC",4,34.27,6,-4.83,2,1.5,1.34,0.06,">1 nonsynonymous","P82S S113F Y123K",3
"lib2","SARS-CoV-2","ATGAAGGAAAGTGAAT",2,16.89,9.89,-0.95,0.11,2.41,1,0.01,">1 nonsynonymous","I2R Y91A K128N",3
"lib2","SARS-CoV-2","ATGAAGGCACATCAAA",2,44.26,10.76,-0.08,0.09,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAAGGCGCTCAAAA",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A T55S T100E V103P A145S",5
"lib2","SARS-CoV-2","ATGAAGGCGTTTATTA",3,1.59,NA,NA,NA,NA,NA,NA,"stop","L5* W106M H189L",3
"lib2","SARS-CoV-2","ATGAAGGTACAAAAAT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","P96H G116*",2
"lib2","SARS-CoV-2","ATGAAGGTATCACAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* Y119M P169C",3
"lib2","SARS-CoV-2","ATGAAGGTCAATCTTG",2,16.82,6.47,-4.36,0.5,1.5,1.15,0.02,">1 nonsynonymous","K94P Y119L",2
"lib2","SARS-CoV-2","ATGAAGGTGCTACAAT",3,38.29,10.31,-0.53,0.04,2.83,1.07,0,">1 nonsynonymous","S36Y N110G F160S",3
"lib2","SARS-CoV-2","ATGAAGGTTAACTACA",10,54.71,6,-4.84,2,3,1.13,0,"1 nonsynonymous","I72N",1
"lib2","SARS-CoV-2","ATGAAGGTTACAGAAT",2,23.68,9.88,-0.96,0.09,2.8,1.04,0,">1 nonsynonymous","E141A G155C",2
"lib2","SARS-CoV-2","ATGAAGTAAAATATAA",3,14.76,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","I2L W106S G146R",3
"lib2","SARS-CoV-2","ATGAAGTAAATAATCC",8,42.34,10.77,-0.07,0.08,3,1.03,0,"1 nonsynonymous","T3R",1
"lib2","SARS-CoV-2","ATGAAGTAACGTTGAG",6,0,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","ATGAAGTAGTTAAAGA",1,9.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R S129L Y159L S184D",4
"lib2","SARS-CoV-2","ATGAAGTCACCATTAA",2,13.73,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V11C N58R I80E K87T",4
"lib2","SARS-CoV-2","ATGAAGTCATACTTGG",2,8.17,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V77S Q84L G152Q",3
"lib2","SARS-CoV-2","ATGAAGTCCCGTAAAT",9,10.26,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S19L D34Y E76S D97I G174A",5
"lib2","SARS-CoV-2","ATGAAGTGCGAAAAAT",6,107.02,10.14,-0.69,0.07,2.76,1.02,0,">1 nonsynonymous","Y39T G83V",2
"lib2","SARS-CoV-2","ATGAAGTTAATACATA",1,52.35,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S29I G86A Y143I",3
"lib2","SARS-CoV-2","ATGAAGTTCCATAGAC",9,133.21,10.72,-0.11,0.03,2.96,1.05,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","ATGAAGTTTCCATAAT",5,102.03,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S53H V103C G146T",3
"lib2","SARS-CoV-2","ATGAATAAAAAGATTT",9,56.54,10.18,-0.66,0.03,2.83,1.13,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","ATGAATAAATCTTGAC",3,18.92,9.4,-1.43,0.15,2.79,1.2,0.01,">1 nonsynonymous","T3G T55D N120T",3
"lib2","SARS-CoV-2","ATGAATAACAAAAAAA",2,66.74,8.91,-1.93,0.08,2.56,1.12,0,">1 nonsynonymous","N4F S41E Y143V",3
"lib2","SARS-CoV-2","ATGAATAACAACTCAT",8,44.24,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T15H G116R P177F",3
"lib2","SARS-CoV-2","ATGAATAACAGGACGT",10,120.22,8.34,-2.5,0.1,1.82,1.09,0,">1 nonsynonymous","I28Q D97V F156S",3
"lib2","SARS-CoV-2","ATGAATAACCCACTTA",6,63.46,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R16M R124Q C158R",3
"lib2","SARS-CoV-2","ATGAATAACTTAACTC",2,22.47,10.71,-0.13,0.06,2.96,1.06,0,">1 nonsynonymous","S147Y T201L",2
"lib2","SARS-CoV-2","ATGAATAATGAGCGAA",6,12.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L R25A",2
"lib2","SARS-CoV-2","ATGAATAATTATAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21E K198N",2
"lib2","SARS-CoV-2","ATGAATACAGGTAAAA",1,14.62,10.9,0.07,0.08,2.94,1.02,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATGAATACCAATTGAT",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121M G166L",2
"lib2","SARS-CoV-2","ATGAATACTTCGCTAA",2,73.13,10.89,0.05,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAATAGATTAATAC",3,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50P S200I",2
"lib2","SARS-CoV-2","ATGAATAGATTAATCC",3,34.42,10.84,0,0.05,2.87,1.1,0,"1 nonsynonymous","R16M",1
"lib2","SARS-CoV-2","ATGAATAGATTGCCCT",6,50.73,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6T T63W G172R V180T",4
"lib2","SARS-CoV-2","ATGAATAGCAGATTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C L122K G172I",3
"lib2","SARS-CoV-2","ATGAATAGTTGTAGTA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGAATATAACATGCC",3,5.41,8.8,-2.03,0.2,2.54,1.18,0.01,">1 nonsynonymous","A42V Y119R P149K Q168I",4
"lib2","SARS-CoV-2","ATGAATATAACCATAG",5,61.9,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39S R73K L95S I104R N120P G152T E186D",7
"lib2","SARS-CoV-2","ATGAATATAAGGCATT",10,76.21,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S41D G83W F167V",3
"lib2","SARS-CoV-2","ATGAATATACAGGGAC",9,140.76,10.25,-0.59,0.06,2.76,1.06,0,"1 nonsynonymous","R136W",1
"lib2","SARS-CoV-2","ATGAATATACCGTACT",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T Y119K",2
"lib2","SARS-CoV-2","ATGAATCAATATGTCA",4,94.9,10.28,-0.55,0.03,3,1.03,0,">1 nonsynonymous","T55Y S129A G174L",3
"lib2","SARS-CoV-2","ATGAATCACAGCTAAT",1,6.75,8.95,-1.88,0.24,1.86,1.13,0.03,">1 nonsynonymous","P96V L187D T201S",3
"lib2","SARS-CoV-2","ATGAATCACTCGAACC",2,32.29,7.48,-3.36,0.32,1.5,1,0.04,">1 nonsynonymous","N4G N120Y F156Q Y165L",4
"lib2","SARS-CoV-2","ATGAATCCAGTTTGCA",3,33.67,10.64,-0.2,0.09,2.77,1.15,0,">1 nonsynonymous","K56D A89S T100I T148L",4
"lib2","SARS-CoV-2","ATGAATCCCACCTTCA",6,11.22,8.12,-2.72,0.17,2.13,1.13,0.02,">1 nonsynonymous","N13C T55F G101D S147Y L188R",5
"lib2","SARS-CoV-2","ATGAATCCCTCGATCT",4,72.81,10.09,-0.75,0.04,2.86,1.03,0,">1 nonsynonymous","C6S H189Y",2
"lib2","SARS-CoV-2","ATGAATCCCTTCACAA",2,27.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N30D S69K S113L Y119L",4
"lib2","SARS-CoV-2","ATGAATCCGATTTAAC",1,29.96,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9A T46L Y50T F167H",4
"lib2","SARS-CoV-2","ATGAATCCTACCATAT",4,4.39,NA,NA,NA,NA,NA,NA,"stop","A14I R25* A42M P96R I104S",5
"lib2","SARS-CoV-2","ATGAATCGATCATATT",3,43.52,10.9,0.07,0.06,2.94,1.07,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","ATGAATCGCCCAAAAG",10,101.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61P T100S R179S L183C",4
"lib2","SARS-CoV-2","ATGAATCGTAACAATC",7,60.7,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","F17K F99Y K114E S129D G174S",5
"lib2","SARS-CoV-2","ATGAATGAAGAGTTTC",5,206,10.55,-0.28,0.04,2.91,1.07,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","ATGAATGACTAAAATT",2,72.81,10.72,-0.11,0.09,2.84,1.07,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","ATGAATGACTGCCAGT",6,12.65,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","V20T S41C T46S S139R P149Y",5
"lib2","SARS-CoV-2","ATGAATGATATCAATG",3,82.15,10.78,-0.06,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAATGATGATAATG",7,1.27,NA,NA,NA,NA,NA,NA,"stop","G9R V20A L38I G146*",4
"lib2","SARS-CoV-2","ATGAATGCAACGCAAC",8,82.96,9.13,-1.71,0.22,1.5,1.04,0.02,">1 nonsynonymous","F17C W106Q",2
"lib2","SARS-CoV-2","ATGAATGCCTAATTGT",8,114.26,8.92,-1.92,0.18,1.5,1.06,0.01,">1 nonsynonymous","G9S W106R R136L",3
"lib2","SARS-CoV-2","ATGAATGGGACTAATA",4,59.83,10.09,-0.74,0.1,2.47,1,0,">1 nonsynonymous","Y66K N130F",2
"lib2","SARS-CoV-2","ATGAATGTATGACATT",1,74.49,6.19,-4.64,0.58,1.5,1.16,0.01,">1 nonsynonymous","V37E N64G G86S V115S F134Q",5
"lib2","SARS-CoV-2","ATGAATGTGAAAAAAT",4,20.86,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V11I Y21R F62R P96M R127V G166P",6
"lib2","SARS-CoV-2","ATGAATGTGTACCCCA",5,126.06,10.77,-0.06,0.04,2.89,1.12,0,">1 nonsynonymous","T3M Y39K",2
"lib2","SARS-CoV-2","ATGAATGTTGTATGCC",4,100.71,10.41,-0.43,0.03,2.97,1.03,0,">1 nonsynonymous","R16P K87H",2
"lib2","SARS-CoV-2","ATGAATGTTTCCCAAT",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52A N107I",2
"lib2","SARS-CoV-2","ATGAATTAATTATAAC",6,46.5,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38R V103E F167V",3
"lib2","SARS-CoV-2","ATGAATTAGGCTAGAT",2,1.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27F",1
"lib2","SARS-CoV-2","ATGAATTCAGTCAGTG",9,17.73,6,-4.84,2,3,1.32,0.02,">1 nonsynonymous","F62R K87T V103E",3
"lib2","SARS-CoV-2","ATGAATTCCACGGGTA",2,13.19,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Q79Y D112W K128I R136S V181A",5
"lib2","SARS-CoV-2","ATGAATTCGAACGCAA",9,0.85,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","ATGAATTCTCTCTACG",4,21.43,7.83,-3.01,0.45,1.5,1.06,0.05,">1 nonsynonymous","T100S T140L Y165I",3
"lib2","SARS-CoV-2","ATGAATTGGCGTAGCC",2,12.63,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N13I A81T",2
"lib2","SARS-CoV-2","ATGAATTGTCAAAGGT",4,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G T15F A33M R124N C158L",5
"lib2","SARS-CoV-2","ATGAATTGTCTAGTTT",6,52.23,8.54,-2.29,0.09,1.75,1.03,0,">1 nonsynonymous","L38R G83N G116L",3
"lib2","SARS-CoV-2","ATGAATTGTGTTAGTA",4,29.83,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","V71K Q84G",2
"lib2","SARS-CoV-2","ATGAATTGTTATGTAT",3,0.46,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","ATGAATTTCATCAAGT",10,4.84,NA,NA,NA,NA,NA,NA,"stop","A81E D90Q D112K Y119R K132T F156* T201G",7
"lib2","SARS-CoV-2","ATGAATTTCGAAAGGC",5,12.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I88W T201S",2
"lib2","SARS-CoV-2","ATGAATTTGATTCACT",4,42.21,6.81,-4.03,0.13,1.5,1.08,0,">1 nonsynonymous","I2P K48I C61Y L183C",4
"lib2","SARS-CoV-2","ATGAATTTTAATCGGT",7,56.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9D Y123S R179I",3
"lib2","SARS-CoV-2","ATGAATTTTAATGGAG",3,22.37,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","N1V A89M Y119H P169R",4
"lib2","SARS-CoV-2","ATGAATTTTACTAAAC",4,31.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5M L38T Y50K A89D S113D F185L",6
"lib2","SARS-CoV-2","ATGAATTTTGAAAGAC",7,56.4,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y66N N110R Y123V L162R",4
"lib2","SARS-CoV-2","ATGAATTTTTTTATCG",4,11.74,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","S45L C61Y V103R Y159T",4
"lib2","SARS-CoV-2","ATGACAAAACTACTTA",2,22.59,8.89,-1.95,0.21,1.5,1.05,0.02,">1 nonsynonymous","R127T H189Y P197N",3
"lib2","SARS-CoV-2","ATGACAAACCCTCGTA",4,61.77,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25M L95S",2
"lib2","SARS-CoV-2","ATGACAAACTAATAGT",2,95.04,10.29,-0.55,0.04,2.9,1.07,0,">1 nonsynonymous","N1S K87S K132T",3
"lib2","SARS-CoV-2","ATGACAAAGATACACT",1,43.15,10.82,-0.01,0.06,2.97,1.04,0,">1 nonsynonymous","K56V T201S",2
"lib2","SARS-CoV-2","ATGACAAAGTAAAACT",8,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N T15K L95G L122M",4
"lib2","SARS-CoV-2","ATGACAAAGTGATAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P T85N N110G L183S C195R T201M",6
"lib2","SARS-CoV-2","ATGACAAATCATACCA",6,30.05,8.36,-2.48,0.28,1.5,1,0.04,">1 nonsynonymous","I28K S139L",2
"lib2","SARS-CoV-2","ATGACAACAAAGACCA",18,125.64,10.77,-0.07,0.06,2.9,1.12,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","ATGACAACCAACCTGA",7,50.89,7.12,-3.71,0.33,1.5,1.17,0.02,">1 nonsynonymous","F62G L95M F156S F185G T201G",5
"lib2","SARS-CoV-2","ATGACAACCCTGTCAC",3,23.9,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","D97R Y165C T170V",3
"lib2","SARS-CoV-2","ATGACAACGATATTCG",10,2.13,NA,NA,NA,NA,NA,NA,"stop","P96L F156*",2
"lib2","SARS-CoV-2","ATGACAAGAGAATTAA",14,138.03,10.66,-0.17,0.03,2.97,1.03,0,">1 nonsynonymous","L5K N120Y S129A",3
"lib2","SARS-CoV-2","ATGACAAGCCTAAACT",5,24.21,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","I2D S45Y K94I G101T L131W",5
"lib2","SARS-CoV-2","ATGACAAGGAGCGCAA",2,48.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37F S53W Q144E F167V",4
"lib2","SARS-CoV-2","ATGACAAGGATAGGGT",3,0.58,NA,NA,NA,NA,NA,NA,"stop","D34C T55*",2
"lib2","SARS-CoV-2","ATGACAATATAGCACT",4,37.43,7.6,-3.23,0.25,1.5,1,0.02,">1 nonsynonymous","Y165E A190L",2
"lib2","SARS-CoV-2","ATGACAATCTTAAGCG",9,33.61,9.31,-1.53,0.16,1.91,1.07,0.01,">1 nonsynonymous","T3V F62T F185D",3
"lib2","SARS-CoV-2","ATGACAATTTCTTCGA",6,48.45,10.46,-0.38,0.04,2.99,1,0,">1 nonsynonymous","S36C S200L",2
"lib2","SARS-CoV-2","ATGACACACAACAACA",9,168.96,10.82,-0.02,0.05,2.99,1.04,0,"1 nonsynonymous","R27E",1
"lib2","SARS-CoV-2","ATGACACACTAATTAG",10,182.44,10.74,-0.1,0.04,2.91,1.08,0,">1 nonsynonymous","V37G Q84L L122K L131V",4
"lib2","SARS-CoV-2","ATGACACAGAATAATT",6,125.4,6.76,-4.08,0.28,1.5,1.19,0.01,">1 nonsynonymous","G116M Y165A",2
"lib2","SARS-CoV-2","ATGACACATTTTAGTG",8,84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36F N92W",2
"lib2","SARS-CoV-2","ATGACACCAGCCCTAA",18,76.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48S Y91W V153F Y159D G174V",5
"lib2","SARS-CoV-2","ATGACACCGCAATATA",1,2.32,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGACACCTAACCTAT",12,354.89,9.48,-1.35,0.04,2.89,1.07,0,"1 nonsynonymous","N109S",1
"lib2","SARS-CoV-2","ATGACACGCTAGACAT",2,36.58,6,-4.84,2,3,1.07,0,">1 nonsynonymous","L38S C150N",2
"lib2","SARS-CoV-2","ATGACACTACCAATAC",1,7.83,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R124C K128E S147N",3
"lib2","SARS-CoV-2","ATGACACTTCGAAACG",8,2.18,NA,NA,NA,NA,NA,NA,"stop","S19* I88E",2
"lib2","SARS-CoV-2","ATGACAGAAGTAAACG",4,16.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I G51T G116W",3
"lib2","SARS-CoV-2","ATGACAGACATCTCCC",5,21.57,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F99R N118M G146Q",3
"lib2","SARS-CoV-2","ATGACAGAGGTTAACG",12,31.78,6,-4.84,2,3,1.18,0.01,"1 nonsynonymous","V180N",1
"lib2","SARS-CoV-2","ATGACAGATGATTGGC",1,44.16,8.52,-2.32,0.12,2.09,1.15,0.01,">1 nonsynonymous","G9E L38T F44L F156T T201L",5
"lib2","SARS-CoV-2","ATGACAGATTACTAGG",4,29.11,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","G86S D98L G172R",3
"lib2","SARS-CoV-2","ATGACAGCTCATACCG",5,17.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G101D P149N N171A",3
"lib2","SARS-CoV-2","ATGACATAAAGTTAAG",4,37.58,10.81,-0.03,0.08,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACATAATCCGTAA",3,21.37,6.03,-4.8,0.83,1.5,1.17,0.01,">1 nonsynonymous","R25I T55H T63R",3
"lib2","SARS-CoV-2","ATGACATACGGCAAAT",2,26.79,10.06,-0.78,0.11,2.76,1.06,0,">1 nonsynonymous","C6V S43I F160M",3
"lib2","SARS-CoV-2","ATGACATCTTAGTGGC",6,9.11,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","ATGACATGCGATAAGC",6,178.32,10.39,-0.44,0.04,2.94,1.05,0,">1 nonsynonymous","G83D V153L",2
"lib2","SARS-CoV-2","ATGACATTAACCACAT",13,79.45,10.8,-0.03,0.04,2.98,1.03,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","ATGACATTACCACAAT",4,59.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N107C V180S",2
"lib2","SARS-CoV-2","ATGACATTACCTTATG",7,12.02,NA,NA,NA,NA,NA,NA,"stop","I2F D59W T85K S108* Y143T V182H",6
"lib2","SARS-CoV-2","ATGACATTATTCAATT",17,175.36,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C61N L95P Q168P",3
"lib2","SARS-CoV-2","ATGACCAAAACCAAGT",3,15.9,9.93,-0.9,0.2,2.43,1,0.02,">1 nonsynonymous","K48F T55N F160L A192F",4
"lib2","SARS-CoV-2","ATGACCAAACTGAACA",5,39.88,8.95,-1.89,0.13,1.78,1.07,0.01,">1 nonsynonymous","G51R Y91V S139D",3
"lib2","SARS-CoV-2","ATGACCAAGAATTTAT",15,2.72,NA,NA,NA,NA,NA,NA,"stop","F44* L57A T63H N130I L162S",5
"lib2","SARS-CoV-2","ATGACCAAGCCAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I Y91H",2
"lib2","SARS-CoV-2","ATGACCAATGAGTAGG",8,154.45,10.18,-0.66,0.05,2.82,1.04,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","ATGACCAATTTGACTT",2,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N C49L G83W Y119G T170N",5
"lib2","SARS-CoV-2","ATGACCAGAAAAAGCA",19,216.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43I D112L F134L F167G T201V",5
"lib2","SARS-CoV-2","ATGACCATAAATTCGC",1,0.95,NA,NA,NA,NA,NA,NA,"stop","L5A D59* V77G G83Y P96H I104Y Y175S",7
"lib2","SARS-CoV-2","ATGACCATATTTATCA",5,54.89,10.76,-0.08,0.06,3,1.02,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","ATGACCATCATTGACG",16,105.47,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y91M R124S E141I",3
"lib2","SARS-CoV-2","ATGACCATGACAAGTG",8,260.23,10.68,-0.16,0.04,2.92,1.03,0,">1 nonsynonymous","N64M Y119N S129R N171M",4
"lib2","SARS-CoV-2","ATGACCCAGCGAACTG",11,130.31,10.12,-0.72,0.05,2.74,1.06,0,">1 nonsynonymous","N13M C61Q D90N",3
"lib2","SARS-CoV-2","ATGACCCCGCTACCAT",2,36.14,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14D G51L Y119R Y143H P149I",5
"lib2","SARS-CoV-2","ATGACCCGATTGCCTT",3,36.75,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D68K K128H",2
"lib2","SARS-CoV-2","ATGACCCGTGGCGACC",9,63.66,9.58,-1.26,0.1,1.87,1.07,0,">1 nonsynonymous","V37Y L162R",2
"lib2","SARS-CoV-2","ATGACCCGTTTAATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L Y91P V115Y E186F",4
"lib2","SARS-CoV-2","ATGACCCTACGCGACT",4,27.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L P54G",2
"lib2","SARS-CoV-2","ATGACCCTATATAAGC",5,33.4,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D34L F44S A89L W106S",4
"lib2","SARS-CoV-2","ATGACCGAAAAAAGTA",4,16.09,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","S41F R127W A190F",3
"lib2","SARS-CoV-2","ATGACCGGCATCATTG",11,310.75,9.29,-1.54,0.07,1.95,1.07,0,">1 nonsynonymous","T3R A22E V37L F160G Y178V",5
"lib2","SARS-CoV-2","ATGACCGGGCTCGAGT",9,73.87,10.58,-0.26,0.04,2.91,1.08,0,">1 nonsynonymous","L60Y V71T",2
"lib2","SARS-CoV-2","ATGACCGGTGCTCATT",1,51.7,10.85,0.02,0.05,2.86,1.16,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","ATGACCTACTGGTCAG",12,3.15,NA,NA,NA,NA,NA,NA,"stop","I2M K87Y I104F K132*",4
"lib2","SARS-CoV-2","ATGACCTAGAGAAGAA",6,22.62,9.44,-1.4,0.08,2.26,1.03,0,">1 nonsynonymous","C6W A81S",2
"lib2","SARS-CoV-2","ATGACCTAGATTAGCT",2,26.12,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","S19V F47M C61K P169E",4
"lib2","SARS-CoV-2","ATGACCTATAGTACGC",4,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S T15N V65S L95H L162R",5
"lib2","SARS-CoV-2","ATGACCTATCAGCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q V32F F62S G86R G146V F167G",6
"lib2","SARS-CoV-2","ATGACCTCGCGCTTCC",2,0.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D75H",1
"lib2","SARS-CoV-2","ATGACCTGGTACAATT",3,77.63,8.41,-2.42,0.16,2.33,1.13,0.01,">1 nonsynonymous","A22E G146V",2
"lib2","SARS-CoV-2","ATGACGAAAAAGACCC",3,28.97,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F12I K56T P82R L162G",4
"lib2","SARS-CoV-2","ATGACGAAAACCCCTA",1,20.03,8.34,-2.5,0.17,2.96,1.02,0.01,"1 nonsynonymous","Y175R",1
"lib2","SARS-CoV-2","ATGACGAACTTTCAAG",4,73.03,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51C G101V G152V F167K",4
"lib2","SARS-CoV-2","ATGACGAATGAGAAGC",4,111.8,10.83,0,0.06,2.83,1.11,0,">1 nonsynonymous","T3P G9D L60Y D98T Y121F",5
"lib2","SARS-CoV-2","ATGACGACAACCCAGT",3,57.37,10.18,-0.65,0.05,2.92,1.08,0,">1 nonsynonymous","N30K T148C",2
"lib2","SARS-CoV-2","ATGACGACCATACATG",8,56.29,6,-4.84,2,3,1.21,0,">1 nonsynonymous","L5I S43L G83P N92T G101L F160I",6
"lib2","SARS-CoV-2","ATGACGACCGACTGAC",4,100.86,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V32T A33S K56W L122F N157V",5
"lib2","SARS-CoV-2","ATGACGACGCTATGGA",2,15.48,8.31,-2.52,0.23,1.74,1.08,0.03,">1 nonsynonymous","C6D R25T",2
"lib2","SARS-CoV-2","ATGACGAGCACGTCCT",2,40.72,9.07,-1.76,0.09,2.19,1.08,0,">1 nonsynonymous","L38H G174M",2
"lib2","SARS-CoV-2","ATGACGATCACGTCCT",3,143.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E141P Q176P",2
"lib2","SARS-CoV-2","ATGACGATCCCTTACG",5,72.54,8.78,-2.06,0.17,1.5,1.04,0.01,">1 nonsynonymous","F12C N40K T55G S129M G196R T201L",6
"lib2","SARS-CoV-2","ATGACGCCGTTAGATA",2,2.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","ATGACGCGGCATTGAG",1,5.74,10.87,0.04,0.17,2.98,1,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","ATGACGCTATATACTT",3,47.35,10.57,-0.27,0.05,2.91,1.08,0,">1 nonsynonymous","P54L I138G",2
"lib2","SARS-CoV-2","ATGACGCTTCTGAAAC",10,1.19,NA,NA,NA,NA,NA,NA,"stop","F8G P96* G152I",3
"lib2","SARS-CoV-2","ATGACGCTTGCTTAAA",6,38.75,10.8,-0.04,0.02,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACGGACCATATAG",3,0.7,NA,NA,NA,NA,NA,NA,"stop","V37S I72V T85*",3
"lib2","SARS-CoV-2","ATGACGGCCTCTTCTG",2,14.1,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48R D98A V180G",3
"lib2","SARS-CoV-2","ATGACGGGGAGAGATA",4,12.58,8.95,-1.89,0.2,1.5,1,0.02,">1 nonsynonymous","L57S W106T",2
"lib2","SARS-CoV-2","ATGACGGTAGAATATT",4,16.42,6,-4.84,2,2.61,1.11,0.01,">1 nonsynonymous","G9N V71Y Q163Y",3
"lib2","SARS-CoV-2","ATGACGGTCTGCAAAA",15,250.08,10.86,0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACGGTTATAGGGT",13,88.58,9.54,-1.29,0.06,1.76,1.07,0,">1 nonsynonymous","N1D E141M V181M S184V",4
"lib2","SARS-CoV-2","ATGACGTACATTCTCT",15,221.87,10.31,-0.53,0.03,2.87,1.07,0,">1 nonsynonymous","T100Q G116W",2
"lib2","SARS-CoV-2","ATGACGTAGAAAGCTG",5,49.08,10.51,-0.32,0.07,2.81,1.05,0,">1 nonsynonymous","P7K Q144Y Q168H",3
"lib2","SARS-CoV-2","ATGACGTAGGTTCAAT",8,99.12,10.65,-0.18,0.04,2.93,1.04,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","ATGACGTATACTAGAA",3,52.88,10.81,-0.03,0.07,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACGTCTCCCTTGA",29,483.83,10.85,0.01,0.05,2.95,1.06,0,">1 nonsynonymous","K128V P197K",2
"lib2","SARS-CoV-2","ATGACGTGTTTAGCAT",9,48.06,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P82N P96L G155N",3
"lib2","SARS-CoV-2","ATGACGTTTATGATTG",1,38.73,10.7,-0.14,0.04,2.99,1.03,0,"1 nonsynonymous","Y39H",1
"lib2","SARS-CoV-2","ATGACTAAAGCGCCTA",3,185.12,8.18,-2.66,0.07,1.65,1.08,0,">1 nonsynonymous","F12Y G83L L125V",3
"lib2","SARS-CoV-2","ATGACTAAATCGCAGA",2,19,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","R25S V32R Y91I A145V C158F G174Q T201S",7
"lib2","SARS-CoV-2","ATGACTAACGCCTAGA",2,14.4,10.06,-0.77,0.12,2.28,1.07,0.02,">1 nonsynonymous","L5G D98G E141W",3
"lib2","SARS-CoV-2","ATGACTAATAAACCTG",1,25.75,10.92,0.08,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACTACAAAATACT",4,52.05,10.91,0.08,0.07,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACTACAGAGGACG",2,59.42,10.56,-0.28,0.04,2.91,1.06,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","ATGACTACATGTGATA",3,14.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E T100V",2
"lib2","SARS-CoV-2","ATGACTACCACATATC",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44G N107C",2
"lib2","SARS-CoV-2","ATGACTACCAGACGTG",12,156.69,7.68,-3.16,0.13,1.5,1.09,0.01,">1 nonsynonymous","Y119T R127L H189G",3
"lib2","SARS-CoV-2","ATGACTACGTAAAGGC",1,5.22,10.61,-0.22,0.12,2.94,1,0,">1 nonsynonymous","N4K R16S S41L",3
"lib2","SARS-CoV-2","ATGACTACTACATACT",10,139.09,10,-0.84,0.1,2.27,1.04,0,">1 nonsynonymous","N13V T201V",2
"lib2","SARS-CoV-2","ATGACTAGCCCACAAG",5,108.3,10.77,-0.07,0.06,2.86,1.15,0,">1 nonsynonymous","G83F K198M",2
"lib2","SARS-CoV-2","ATGACTATAACGCCTG",2,51.33,8.73,-2.1,0.09,2.93,1.06,0,">1 nonsynonymous","F44S K87L Y119A",3
"lib2","SARS-CoV-2","ATGACTATTGGACAAC",2,9.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N92I R124S L183A",3
"lib2","SARS-CoV-2","ATGACTCAAACTAGTA",2,94.35,6,-4.84,1.08,1.54,1.15,0.01,">1 nonsynonymous","G9T L131W Q144V",3
"lib2","SARS-CoV-2","ATGACTCACGCCCTAT",1,44.07,8.24,-2.59,0.1,1.85,1.01,0,">1 nonsynonymous","V37L K94C P169W",3
"lib2","SARS-CoV-2","ATGACTCAGGACCCAT",1,9.91,6.48,-4.36,0.51,1.77,1.12,0.01,">1 nonsynonymous","C6N T15N K26T V37I V103Q",5
"lib2","SARS-CoV-2","ATGACTCATTCTAATG",12,239.05,10.54,-0.3,0.04,2.9,1.07,0,">1 nonsynonymous","K26F G51R",2
"lib2","SARS-CoV-2","ATGACTCCATTCTACA",1,25.96,10.44,-0.4,0.08,2.96,1.07,0,">1 nonsynonymous","D98R S129K N151T",3
"lib2","SARS-CoV-2","ATGACTCCCATCTCCA",5,49.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19R P54V T140H L162P",4
"lib2","SARS-CoV-2","ATGACTCCCTTAACTG",4,13.54,6.34,-4.5,0.25,1.57,1.03,0,">1 nonsynonymous","Y93N F99Y S139G",3
"lib2","SARS-CoV-2","ATGACTCCTAAAGACA",7,5.28,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","K56L L95H",2
"lib2","SARS-CoV-2","ATGACTCTTGCAAAGT",1,3.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","ATGACTGAACAACAAA",4,28.48,7.54,-3.3,0.44,1.5,1.04,0.06,">1 nonsynonymous","G83W A89M",2
"lib2","SARS-CoV-2","ATGACTGATTCCAGGA",21,169.06,6,-4.84,0.78,1.5,1.14,0,">1 nonsynonymous","G9N N64L K87M Q144L P161L T201S",6
"lib2","SARS-CoV-2","ATGACTGCACAGTTAT",9,117.18,10.05,-0.79,0.04,2.5,1.04,0,">1 nonsynonymous","F12L D34F L122Y",3
"lib2","SARS-CoV-2","ATGACTGCCACCCCTG",2,43.71,10.88,0.04,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACTGCTCAAATTG",2,11.12,6.55,-4.29,0.46,3,1.11,0.01,">1 nonsynonymous","L5I K87Q E141T L162W",4
"lib2","SARS-CoV-2","ATGACTGCTGAGACTG",13,159.33,10.68,-0.16,0.05,2.89,1.07,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","ATGACTGGCTGCTTTC",1,33.77,8.35,-2.49,0.17,2.32,1.07,0.01,"1 nonsynonymous","S113P",1
"lib2","SARS-CoV-2","ATGACTGTAAACGACG",17,259.52,10.58,-0.25,0.03,2.93,1.05,0,">1 nonsynonymous","S53F T100Y",2
"lib2","SARS-CoV-2","ATGACTGTAACCAAAC",4,18.13,7.99,-2.85,0.2,1.57,1.13,0.02,">1 nonsynonymous","A89M E141Q C195M",3
"lib2","SARS-CoV-2","ATGACTTATCAGAATG",6,133.78,9.52,-1.32,0.07,1.91,1.06,0,">1 nonsynonymous","F12G S147P",2
"lib2","SARS-CoV-2","ATGACTTCCTGTGCAT",5,26.62,8.07,-2.76,0.22,2.09,1.04,0.02,">1 nonsynonymous","A42G Y143R A190V",3
"lib2","SARS-CoV-2","ATGACTTCGATGACTA",9,0,NA,NA,NA,NA,NA,NA,"stop","N13F D59* P191L",3
"lib2","SARS-CoV-2","ATGACTTCGGCCAGAG",12,213.57,9.66,-1.17,0.06,2.1,1.05,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","ATGACTTCGTTCATAT",8,203.27,10.86,0.03,0.05,2.94,1.06,0,">1 nonsynonymous","R16Y N151R",2
"lib2","SARS-CoV-2","ATGACTTCTAAACAAA",7,53.64,10.89,0.06,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGACTTGATATAAAA",1,51.03,8.56,-2.27,0.11,2.83,1.02,0.01,">1 nonsynonymous","S113F T201Q",2
"lib2","SARS-CoV-2","ATGACTTGCGGACATT",6,55.28,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","ATGACTTTATAAACTG",4,16,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G86R C102L",2
"lib2","SARS-CoV-2","ATGACTTTCACTCTAG",10,0.66,NA,NA,NA,NA,NA,NA,"stop","T3* K56I",2
"lib2","SARS-CoV-2","ATGACTTTGTCAATGA",5,83.96,10.43,-0.41,0.07,2.9,1.09,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","ATGAGAAAAATACACC",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88S T100W P149S",3
"lib2","SARS-CoV-2","ATGAGAAAATTATCTG",5,29.74,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F99C N107G",2
"lib2","SARS-CoV-2","ATGAGAAACAGGGAAA",5,38.09,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","N30M S43K K128L S139L T170Y",5
"lib2","SARS-CoV-2","ATGAGAAACCTATAGT",9,85.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44S I80H T85N D97N K114T",5
"lib2","SARS-CoV-2","ATGAGAAACTCATCGC",2,19.47,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I104R S113D T140N P149Q",4
"lib2","SARS-CoV-2","ATGAGAAAGAGCTACC",2,59.14,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A18L P82T W106K F126A I138S",5
"lib2","SARS-CoV-2","ATGAGAAAGAGTAATA",2,24.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11N D90A A105D Y123E G155S",5
"lib2","SARS-CoV-2","ATGAGAAAGGCATGGG",8,0.61,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGAGAAATAAGGATG",1,31.01,9.39,-1.45,0.14,2.06,1.12,0.01,">1 nonsynonymous","V37C V52A V173G",3
"lib2","SARS-CoV-2","ATGAGAACACGATATA",6,88.77,10.35,-0.48,0.05,2.87,1.11,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","ATGAGAACCGCTGACA",4,0,NA,NA,NA,NA,NA,NA,"stop","I28* P197R",2
"lib2","SARS-CoV-2","ATGAGAAGAAAAACGA",7,134.99,10.12,-0.72,0.04,2.8,1.06,0,"1 nonsynonymous","Y35D",1
"lib2","SARS-CoV-2","ATGAGAAGCTAAGCGA",5,204.68,10.21,-0.62,0.03,2.91,1.04,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","ATGAGAATAAGCGACA",10,13.37,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C6V T15E K48M L57S D97P V181R",6
"lib2","SARS-CoV-2","ATGAGAATAGTGTTGG",4,74.74,10.28,-0.56,0.07,2.7,1,0,"1 nonsynonymous","L131C",1
"lib2","SARS-CoV-2","ATGAGAATATCGGCGA",2,24.47,10.81,-0.03,0.08,2.88,1.1,0,">1 nonsynonymous","A18T S43A P197R",3
"lib2","SARS-CoV-2","ATGAGAATCTGATAAC",2,41.17,10.22,-0.62,0.05,2.93,1,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","ATGAGAATGTTCAGAT",3,8.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","ATGAGAATTAGAGAAA",6,14.98,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y93L S113M",2
"lib2","SARS-CoV-2","ATGAGACACATTAGCA",2,22.61,9.1,-1.74,0.07,2.97,1.08,0,">1 nonsynonymous","G166C T201R",2
"lib2","SARS-CoV-2","ATGAGACATCACACCT",2,9.42,7.73,-3.11,0.43,1.5,1,0.06,">1 nonsynonymous","N4G F47M P82Y",3
"lib2","SARS-CoV-2","ATGAGACATGCACCCC",2,79.59,8.87,-1.97,0.06,1.98,1.07,0,">1 nonsynonymous","I2S N13W Y143L",3
"lib2","SARS-CoV-2","ATGAGACCACAAAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","L95* W106A Y119F L125S N157D F167L",6
"lib2","SARS-CoV-2","ATGAGACCCCCCGCTA",9,103.38,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L60C P96M F99P N118C",4
"lib2","SARS-CoV-2","ATGAGACCCCCGCAAA",13,47.9,7.55,-3.28,0.25,1.5,1.18,0.02,">1 nonsynonymous","R78H G86Y",2
"lib2","SARS-CoV-2","ATGAGACGATGAGAAT",4,95.75,10.82,-0.02,0.06,2.87,1.14,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","ATGAGACGGTTATGTT",5,1.4,NA,NA,NA,NA,NA,NA,"stop","S36* G51E F62G Y91N D98V E135* P149H",7
"lib2","SARS-CoV-2","ATGAGACTACTCGTCT",17,261.77,10.77,-0.07,0.04,2.93,1.07,0,">1 nonsynonymous","D90S K199Y",2
"lib2","SARS-CoV-2","ATGAGACTCTTACACA",8,22.36,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D34Y K56S A81V P96W F99S",5
"lib2","SARS-CoV-2","ATGAGACTTGAGCTAT",5,28.28,6.07,-4.77,0.72,1.5,1.13,0.01,">1 nonsynonymous","F99H Y123R D137S N157C",4
"lib2","SARS-CoV-2","ATGAGAGAGTGCAATC",1,3.3,NA,NA,NA,NA,NA,NA,"stop","F12* Y91P L122S K128*",4
"lib2","SARS-CoV-2","ATGAGAGATTTCTAGT",3,43.96,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y50L N120I G174M",3
"lib2","SARS-CoV-2","ATGAGAGCTTACCCAA",3,4.13,NA,NA,NA,NA,NA,NA,"stop","L5R L60F V71* A89N",4
"lib2","SARS-CoV-2","ATGAGAGGAAATATAA",1,0.32,NA,NA,NA,NA,NA,NA,"stop","I2V N92* D97R V103* L187Q",5
"lib2","SARS-CoV-2","ATGAGAGGACGTATTA",1,3.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","ATGAGAGTCATTTGCC",2,54.17,8.12,-2.72,0.11,2.51,1.01,0,">1 nonsynonymous","V37C S113K",2
"lib2","SARS-CoV-2","ATGAGAGTGTATTTTC",1,33,7.53,-3.31,0.43,1.5,1.2,0.06,">1 nonsynonymous","R27K L38P D112V T201R",4
"lib2","SARS-CoV-2","ATGAGAGTTTTGTCCT",2,35.13,10.3,-0.53,0.08,2.75,1.11,0,"1 nonsynonymous","S139V",1
"lib2","SARS-CoV-2","ATGAGATAAACAGAAG",5,46.34,6,-4.84,0.44,3,1.11,0,">1 nonsynonymous","F47S F70A E76A S129R F167L",5
"lib2","SARS-CoV-2","ATGAGATAAAGGGTAA",2,63.17,10.89,0.06,0.07,2.87,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAGATCACATAGAA",5,16.96,6.89,-3.94,0.4,1.5,1.17,0.02,">1 nonsynonymous","W23K D34S D68E L122W",4
"lib2","SARS-CoV-2","ATGAGATGATACTGGA",4,71.65,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L95V N118I Y121I",3
"lib2","SARS-CoV-2","ATGAGATTAATAATAT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","ATGAGATTCCACACAA",6,51.93,10.65,-0.19,0.06,2.88,1.14,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","ATGAGATTCTAATATA",7,85.4,10.85,0.01,0.06,2.95,1.07,0,">1 nonsynonymous","N64I P197A",2
"lib2","SARS-CoV-2","ATGAGATTGAAAATTG",1,17.5,9.72,-1.11,0.17,2.04,1.05,0.03,">1 nonsynonymous","G51L G155R",2
"lib2","SARS-CoV-2","ATGAGATTGTAAAGAT",2,0.66,NA,NA,NA,NA,NA,NA,"stop","A42* C61L Y66N F99R C158I P169V K198S",7
"lib2","SARS-CoV-2","ATGAGATTTATTATTA",1,0.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","ATGAGATTTGCAATAG",13,230.17,8.7,-2.14,0.08,1.61,1.09,0,">1 nonsynonymous","F8Q Y39A L122H Q144K",4
"lib2","SARS-CoV-2","ATGAGATTTTCTCTTA",4,50.33,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y91R Y121H Y159C Y165L",4
"lib2","SARS-CoV-2","ATGAGCAAAAGGTAGT",7,81.8,9.25,-1.59,0.06,2.59,1.08,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","ATGAGCAAAATTGGTG",7,78.51,10.85,0.01,0.06,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGAGCAAATTAAGGG",4,32.71,10.65,-0.18,0.06,2.86,1.15,0,">1 nonsynonymous","N120R G146S",2
"lib2","SARS-CoV-2","ATGAGCAAGAGTAAAC",1,11.09,10.69,-0.15,0.14,3,1.07,0.01,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","ATGAGCAATCTGTTTC",4,1.54,NA,NA,NA,NA,NA,NA,"stop","T15M A42* K94* T140N P197A",5
"lib2","SARS-CoV-2","ATGAGCACAATATGAA",3,4.11,NA,NA,NA,NA,NA,NA,"stop","D34R G83* N107L G146P F156Q",5
"lib2","SARS-CoV-2","ATGAGCACACGCAATA",4,43.91,10.75,-0.09,0.07,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGAGCACGACTATAA",1,40.03,8.91,-1.93,0.09,2.81,1.11,0,">1 nonsynonymous","S53T F167W",2
"lib2","SARS-CoV-2","ATGAGCAGGCTCGAAC",5,21.53,10.39,-0.45,0.37,2.08,1,0.08,">1 nonsynonymous","A42Y S53V D68P G83I G117W P149S",6
"lib2","SARS-CoV-2","ATGAGCAGTACATATG",4,21.61,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L57S V103K",2
"lib2","SARS-CoV-2","ATGAGCAGTCTAGCCT",20,172.64,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39N P133R Y165W",3
"lib2","SARS-CoV-2","ATGAGCATCATCATAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","A89L F99* Q144V",3
"lib2","SARS-CoV-2","ATGAGCATGCATTGAC",3,51.1,9.03,-1.8,0.11,2.81,1.11,0,">1 nonsynonymous","G9M G146R",2
"lib2","SARS-CoV-2","ATGAGCATTTCATAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L60S G74E P96L L125* G152C",5
"lib2","SARS-CoV-2","ATGAGCCAAGCGATAA",5,51.89,10.65,-0.19,0.05,2.93,1.06,0,">1 nonsynonymous","E10K K56Q",2
"lib2","SARS-CoV-2","ATGAGCCAGTTATGAT",6,85.31,6.68,-4.16,0.24,1.5,1.17,0.01,">1 nonsynonymous","C31P F134I P149S",3
"lib2","SARS-CoV-2","ATGAGCCATAAAGGCA",11,159.25,10.41,-0.42,0.03,2.92,1.1,0,">1 nonsynonymous","P7E C31K",2
"lib2","SARS-CoV-2","ATGAGCCCAGCTTGTG",4,15.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y V103S",2
"lib2","SARS-CoV-2","ATGAGCCCATCTGTCC",1,105.56,6.26,-4.58,0.8,1.5,1.34,0.03,">1 nonsynonymous","C61G P82L K132E Q176T",4
"lib2","SARS-CoV-2","ATGAGCCTACATAAAG",1,7.98,9.79,-1.05,0.47,1.73,1,0.06,">1 nonsynonymous","A42L L57H G155F A190T",4
"lib2","SARS-CoV-2","ATGAGCCTCTAATGAT",3,24.77,6.33,-4.5,0.56,1.98,1.14,0.01,">1 nonsynonymous","I72F S108I K128G",3
"lib2","SARS-CoV-2","ATGAGCGCAGATAACT",3,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32T N107L K128L I142S P197S",5
"lib2","SARS-CoV-2","ATGAGCGCGCGGACAT",5,59.05,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","G9C E10R S36L F44S Y50W Y93R N120D",7
"lib2","SARS-CoV-2","ATGAGCTAAGCGGTCA",3,2.2,NA,NA,NA,NA,NA,NA,"stop","C6* A89V R124A E141V V182A",5
"lib2","SARS-CoV-2","ATGAGCTACTACTTCT",5,2.84,NA,NA,NA,NA,NA,NA,"stop","A81H G101I V173*",3
"lib2","SARS-CoV-2","ATGAGCTAGTATTAAC",3,34.41,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","L38H K128V G172L",3
"lib2","SARS-CoV-2","ATGAGCTATAACATCG",8,76.47,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I88V K94N D112C Y143Q",4
"lib2","SARS-CoV-2","ATGAGCTCAATACACC",1,8.38,6.24,-4.6,2,1.5,1.23,0.04,">1 nonsynonymous","V37L F44H C61P D137A",4
"lib2","SARS-CoV-2","ATGAGCTCGCCATATG",2,34.8,10.75,-0.09,0.06,2.88,1.13,0,">1 nonsynonymous","N4S K26I",2
"lib2","SARS-CoV-2","ATGAGCTTTCGGATCT",6,102.97,8.34,-2.5,0.11,1.93,1.05,0,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","ATGAGGAAAACCAGGG",8,113.02,10.73,-0.11,0.03,2.95,1.07,0,"1 nonsynonymous","I138R",1
"lib2","SARS-CoV-2","ATGAGGAAAGGATACT",3,44.53,10.37,-0.46,0.04,3,1.02,0,"1 nonsynonymous","F156R",1
"lib2","SARS-CoV-2","ATGAGGAACAAGCTGA",16,6.87,NA,NA,NA,NA,NA,NA,"stop","Y93T G174*",2
"lib2","SARS-CoV-2","ATGAGGAACCAACGGG",9,219.85,10.94,0.11,0.04,2.89,1.11,0,">1 nonsynonymous","Y39L T55A",2
"lib2","SARS-CoV-2","ATGAGGAACCTGAGAA",1,0.58,NA,NA,NA,NA,NA,NA,"stop","V32* Y123G F156T",3
"lib2","SARS-CoV-2","ATGAGGAGAACGTTAT",10,138.38,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25S N107K F167L Y178V A192T",5
"lib2","SARS-CoV-2","ATGAGGATAACTATCA",7,118.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T3V S36M G74P Q144W P177G S200I",6
"lib2","SARS-CoV-2","ATGAGGATTAACCACA",4,46.46,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","D34Q G83P",2
"lib2","SARS-CoV-2","ATGAGGCATCAGCGGA",2,20.05,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","S53Y C61S G146M Q176K",4
"lib2","SARS-CoV-2","ATGAGGCCCACAAGCT",7,8.13,6,-4.84,2,1.5,1.08,0.04,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","ATGAGGCTGAAATCCC",7,83.18,10.28,-0.56,0.03,2.93,1.06,0,">1 nonsynonymous","N4K A42E N130L P169F",4
"lib2","SARS-CoV-2","ATGAGGGCACACCCAA",8,325.59,10.71,-0.12,0.02,2.93,1.08,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","ATGAGGGGAACGAAAC",11,38.16,6,-4.84,1.97,1.5,1.19,0.03,">1 nonsynonymous","L5D F44V L57K K94Y R136T",5
"lib2","SARS-CoV-2","ATGAGGGTGTATTACA",14,2.08,NA,NA,NA,NA,NA,NA,"stop","K94* Q144T T170I Y175P",4
"lib2","SARS-CoV-2","ATGAGGGTTCCTCTAT",2,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S41F I138L E154P",4
"lib2","SARS-CoV-2","ATGAGGGTTTGCGGGC",1,9.79,11.01,0.17,0.09,2.97,1.05,0,"1 nonsynonymous","K56N",1
"lib2","SARS-CoV-2","ATGAGGTATAAGCTGT",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","ATGAGGTCAATCAGTA",4,5.78,10.04,-0.8,0.11,3,1.04,0,">1 nonsynonymous","L5F P54F Y119R",3
"lib2","SARS-CoV-2","ATGAGGTCCATTTCCT",5,121.46,8.12,-2.72,0.13,2.1,1.07,0.01,">1 nonsynonymous","C61G G83C D98S T170L",4
"lib2","SARS-CoV-2","ATGAGGTCCGATTTCG",4,33.72,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4D Y50R T148G P161T Q176D",5
"lib2","SARS-CoV-2","ATGAGGTGTTGTGAGA",2,11.36,8.07,-2.76,0.26,2.02,1.06,0.02,">1 nonsynonymous","D112V Y119T",2
"lib2","SARS-CoV-2","ATGAGTAAAAACAAAA",3,48.99,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T148L P177E",2
"lib2","SARS-CoV-2","ATGAGTAAATACACGG",8,91.5,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7D F17I L122G K128N A145D G172L",6
"lib2","SARS-CoV-2","ATGAGTAATACCCTAC",1,14.15,9.95,-0.88,0.12,2.68,1,0.01,">1 nonsynonymous","V11M S41C K128R",3
"lib2","SARS-CoV-2","ATGAGTACAACTAAAC",2,60.21,10.76,-0.08,0.03,2.93,1.06,0,">1 nonsynonymous","S139T S200F",2
"lib2","SARS-CoV-2","ATGAGTACTAGACACA",2,23.08,10.68,-0.15,0.09,2.9,1.09,0,">1 nonsynonymous","K114E N151R",2
"lib2","SARS-CoV-2","ATGAGTAGTTACTTAT",4,32.3,8.82,-2.01,0.06,2.99,1.04,0,">1 nonsynonymous","Y119S E154L Q168N V173C",4
"lib2","SARS-CoV-2","ATGAGTATAAATGTAT",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V A89L F134K C150R T170R",5
"lib2","SARS-CoV-2","ATGAGTATGGCTCACC",2,123.41,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","Y50M L125K N151Q",3
"lib2","SARS-CoV-2","ATGAGTATTAAGTATG",5,20.2,6.32,-4.52,0.84,1.5,1.34,0.04,">1 nonsynonymous","T15H Y50V T55R Q163I",4
"lib2","SARS-CoV-2","ATGAGTATTGATAAGT",1,39.43,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10A V77S Y121T Q144I G152T",5
"lib2","SARS-CoV-2","ATGAGTCAAAACTCCT",7,7.16,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G51W G101S",2
"lib2","SARS-CoV-2","ATGAGTCAACGGGCAT",3,30.63,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","F12K S19V P54R V65Q E76T T201E",6
"lib2","SARS-CoV-2","ATGAGTCGAGTGATTA",6,59.99,6,-4.84,0.78,1.5,1.13,0.01,">1 nonsynonymous","G51I D112G R136G",3
"lib2","SARS-CoV-2","ATGAGTCTACATCGCA",6,137.75,10.09,-0.74,0.05,2.78,1.06,0,">1 nonsynonymous","A33V Q144V G174A L187D",4
"lib2","SARS-CoV-2","ATGAGTCTTTGCAGGA",6,58.68,10.77,-0.07,0.07,2.84,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGAGTGATAAATCCG",6,26.6,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6E N40G L57F Q84P P133Y E141M E154S",7
"lib2","SARS-CoV-2","ATGAGTGGACTGTAAC",5,167.29,9.89,-0.95,0.03,2.87,1.07,0,">1 nonsynonymous","G83R V115C",2
"lib2","SARS-CoV-2","ATGAGTGGCGGAAAAT",4,56.25,9.96,-0.88,0.06,2.88,1.02,0,">1 nonsynonymous","L5D G155Y",2
"lib2","SARS-CoV-2","ATGAGTGTCCAATTAT",8,135.83,10.14,-0.69,0.05,2.53,1,0,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","ATGAGTTAAAAAAGGC",8,39.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44E G74W I88Q G152I",4
"lib2","SARS-CoV-2","ATGAGTTAAATACGAG",6,159.39,6,-4.84,1.97,1.5,1.13,0,">1 nonsynonymous","C61Y N157L Y165G Q176E",4
"lib2","SARS-CoV-2","ATGAGTTAACTCTGTG",4,0.21,NA,NA,NA,NA,NA,NA,"stop","F17V F44S Y143* G166M",4
"lib2","SARS-CoV-2","ATGAGTTAGCACACTT",1,41.43,10.95,0.12,0.07,2.91,1.1,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","ATGAGTTATTATACGT",8,135.73,10.7,-0.14,0.03,2.93,1.07,0,">1 nonsynonymous","G51R Y66V T201M",3
"lib2","SARS-CoV-2","ATGAGTTGTGTCGTTA",2,27.66,6.19,-4.65,1.01,1.5,1.17,0.03,">1 nonsynonymous","S41Y V115T K128L Y143K",4
"lib2","SARS-CoV-2","ATGAGTTTAAGGAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18* D68M P82S K114M K199N",5
"lib2","SARS-CoV-2","ATGAGTTTACTTAAAG",5,11.54,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","F8N A67N D68N A89N Y165T G172N",6
"lib2","SARS-CoV-2","ATGATAAAAATTTAAG",1,18.8,10.92,0.08,0.09,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATAAAGGAATATT",6,0.62,NA,NA,NA,NA,NA,NA,"stop","C31* A42H F156Q",3
"lib2","SARS-CoV-2","ATGATAAATACGTACA",2,13.73,8.89,-1.95,0.13,1.62,1.04,0.01,">1 nonsynonymous","D34S Y91Q",2
"lib2","SARS-CoV-2","ATGATAAATATCCAAA",7,12.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P F12S A14L T85P W106R",5
"lib2","SARS-CoV-2","ATGATAAATTAGAGAT",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64T I138T G146H",3
"lib2","SARS-CoV-2","ATGATAAATTGGAACC",1,18.75,10.22,-0.62,0.11,2.91,1.01,0.01,"1 nonsynonymous","C6Y",1
"lib2","SARS-CoV-2","ATGATAAATTTAAAGT",1,34.6,10.5,-0.33,0.08,2.89,1.06,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","ATGATAACCACAACAA",1,5.15,NA,NA,NA,NA,NA,NA,"stop","C49D K87W L95*",3
"lib2","SARS-CoV-2","ATGATAACCATATGCC",14,50.02,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N24F D34Y N120V P149H",4
"lib2","SARS-CoV-2","ATGATAACGAGTGCAT",3,134.37,6,-4.84,2,3,1.24,0,">1 nonsynonymous","K56L P177T",2
"lib2","SARS-CoV-2","ATGATAAGACAAAGTT",11,194.44,10.54,-0.29,0.03,2.94,1.02,0,">1 nonsynonymous","N1A S184F",2
"lib2","SARS-CoV-2","ATGATAAGCATTTTTT",2,9.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V C49N D90S W106P",4
"lib2","SARS-CoV-2","ATGATAAGTGGCCTAA",11,68.66,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","A14G V103A",2
"lib2","SARS-CoV-2","ATGATAATAATTCATG",1,43.17,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V103C N107K P177S",3
"lib2","SARS-CoV-2","ATGATAATACACGTCA",2,16.35,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K87R R127L G155V F167V",4
"lib2","SARS-CoV-2","ATGATAATACAGGGGT",4,70.51,10.33,-0.51,0.04,2.9,1.04,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","ATGATAATATGTGATT",2,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K Y121L K128V C158V R179G",5
"lib2","SARS-CoV-2","ATGATAATCCTTTATC",3,55.58,6.75,-4.09,0.34,1.5,1.17,0.02,">1 nonsynonymous","F99I V103F Y121N Y143I",4
"lib2","SARS-CoV-2","ATGATAATGCCAATTC",11,127.56,10.86,0.02,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATAATTATTGTTA",8,16.41,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","P96N S113A V182D",3
"lib2","SARS-CoV-2","ATGATAATTTAATATA",9,98.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D112S I142V F185S",3
"lib2","SARS-CoV-2","ATGATAATTTACAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y F62S R124D E135S V180C",5
"lib2","SARS-CoV-2","ATGATACACCCTCAAA",5,177.46,9.94,-0.9,0.08,2.2,1.05,0,">1 nonsynonymous","Y50H T63L",2
"lib2","SARS-CoV-2","ATGATACATGCCATAG",5,12.41,10.29,-0.55,0.1,2.76,1.2,0.01,">1 nonsynonymous","L60C A105T",2
"lib2","SARS-CoV-2","ATGATACATTGATTAG",8,151.24,9.64,-1.19,0.05,2.73,1.04,0,">1 nonsynonymous","P7C A42D G83S K87C",4
"lib2","SARS-CoV-2","ATGATACATTTTTTAG",4,22.83,8.59,-2.25,0.11,3,1.08,0,">1 nonsynonymous","C31R A42M Y119N C195R",4
"lib2","SARS-CoV-2","ATGATACTAACAATAT",1,31.09,10.24,-0.6,0.04,2.94,1.07,0,">1 nonsynonymous","T15V K56T V115E",3
"lib2","SARS-CoV-2","ATGATACTAGTAGACA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","K94* K128* N157T Y178N",4
"lib2","SARS-CoV-2","ATGATACTATCATTGC",1,27.6,8.55,-2.29,0.09,2.7,1.07,0,">1 nonsynonymous","A14K K94H Y119V V173M K199S",5
"lib2","SARS-CoV-2","ATGATACTGGATACTA",4,29.47,10.79,-0.05,0.04,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATACTTCCACCCT",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Q D90F",2
"lib2","SARS-CoV-2","ATGATAGAGAAACCAA",1,16.52,10.81,-0.03,0.07,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGATAGAGCGCGACC",7,143.27,10.91,0.07,0.06,2.92,1.08,0,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","ATGATAGCACAAACTA",6,0.93,NA,NA,NA,NA,NA,NA,"stop","N13* L95F",2
"lib2","SARS-CoV-2","ATGATAGCCTGAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","P54I C61S N107S Y119K I142*",5
"lib2","SARS-CoV-2","ATGATAGCGGTCCCAT",5,0,NA,NA,NA,NA,NA,NA,"stop","E10* T15S I88N",3
"lib2","SARS-CoV-2","ATGATAGGATCCCGAA",1,11.39,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","E10V N30V F62T G83T V103G E154Y",6
"lib2","SARS-CoV-2","ATGATAGGCTGTAAAA",5,18.58,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V20M K26E Y50H F134M S147C G174V",6
"lib2","SARS-CoV-2","ATGATAGTACAATTTC",4,7.13,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C31Y C102H F134V",3
"lib2","SARS-CoV-2","ATGATAGTAGATCTAA",1,13.22,10.8,-0.04,0.15,2.93,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATGATAGTGACAGAAT",5,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S129P G146E",3
"lib2","SARS-CoV-2","ATGATATACAATAGAG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","A14* T55S S69G K94A",4
"lib2","SARS-CoV-2","ATGATATACGCCCGCA",8,216.82,10.01,-0.82,0.04,2.96,1.04,0,">1 nonsynonymous","N40A Q168T",2
"lib2","SARS-CoV-2","ATGATATAGTGAATTG",4,48.12,10.94,0.1,0.06,2.9,1.11,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","ATGATATATAGACTCA",4,223.62,8.46,-2.37,0.11,2.96,1.03,0.01,"1 nonsynonymous","Y175M",1
"lib2","SARS-CoV-2","ATGATATATGAATCCA",14,1.05,NA,NA,NA,NA,NA,NA,"stop","R27V F99Y C158T N171*",4
"lib2","SARS-CoV-2","ATGATATATTTGATAT",11,29.49,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","N4S T15N K94T",3
"lib2","SARS-CoV-2","ATGATATGCATATGGT",3,14.42,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6G N157F F167K",3
"lib2","SARS-CoV-2","ATGATATTTCAACTTT",16,313.12,10.17,-0.67,0.01,2.94,1.02,0,">1 nonsynonymous","G9M G152C K199H",3
"lib2","SARS-CoV-2","ATGATATTTTGGCGGG",11,291.99,10.82,-0.02,0.05,2.92,1.07,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","ATGATCAAGGCTGGAC",2,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P C61Y D90V P149I V180L",5
"lib2","SARS-CoV-2","ATGATCACAAGCCGCT",6,2106.94,10.46,-0.37,0.03,2.95,1.02,0,"1 nonsynonymous","N151P",1
"lib2","SARS-CoV-2","ATGATCAGCACAACTA",16,111.62,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","G86M D97A G155I",3
"lib2","SARS-CoV-2","ATGATCATACCATAAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","Y91K S139R Q168S A192*",4
"lib2","SARS-CoV-2","ATGATCATATTAAGGT",5,61.98,10.4,-0.44,0.06,2.86,1.07,0,">1 nonsynonymous","C61L D90N S129V",3
"lib2","SARS-CoV-2","ATGATCATATTATCAC",4,21.32,6,-4.84,2,3,1.17,0.01,"1 nonsynonymous","N92I",1
"lib2","SARS-CoV-2","ATGATCATCAACCTGT",2,16.17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51P R73P D112K P149Q Q163C",5
"lib2","SARS-CoV-2","ATGATCCAATAACGCG",5,79.2,10.56,-0.28,0.03,2.96,1.04,0,">1 nonsynonymous","T3K S41H Y175F",3
"lib2","SARS-CoV-2","ATGATCCAGCACACCT",6,134.6,9.75,-1.09,0.05,2.05,1.02,0,">1 nonsynonymous","Y39K V77A",2
"lib2","SARS-CoV-2","ATGATCCATACTAGGG",2,30.97,9.64,-1.19,0.11,2,1.03,0,">1 nonsynonymous","F8I Y35G L60P",3
"lib2","SARS-CoV-2","ATGATCCATATAGCGA",12,2.21,NA,NA,NA,NA,NA,NA,"stop","S36E F44* F70I A105Y",4
"lib2","SARS-CoV-2","ATGATCCCGCTTAAAC",3,22.41,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6R S139T G152V R179E",4
"lib2","SARS-CoV-2","ATGATCCTCCGTCCGT",5,111,10.25,-0.58,0.03,2.93,1.03,0,">1 nonsynonymous","C6F C61L",2
"lib2","SARS-CoV-2","ATGATCCTGTCCACCC",8,93.65,10.79,-0.05,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATCGACACAAAAC",3,71.65,10.8,-0.04,0.06,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGATCGATAAAAAAT",3,64.59,10.9,0.06,0.06,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGATCGCGCCATAAA",2,79.77,10.86,0.03,0.04,2.97,1.04,0,"1 nonsynonymous","P197E",1
"lib2","SARS-CoV-2","ATGATCGCTGAATAAA",4,82.32,9.9,-0.94,0.06,2.4,1.16,0,">1 nonsynonymous","C49V N64I",2
"lib2","SARS-CoV-2","ATGATCGTAACCAAGT",13,3.87,NA,NA,NA,NA,NA,NA,"stop","A33Y G86S Y123K Y178* P197*",5
"lib2","SARS-CoV-2","ATGATCTACACGGGAT",3,97.73,8.34,-2.49,0.2,1.5,1.1,0.01,"1 nonsynonymous","R25G",1
"lib2","SARS-CoV-2","ATGATCTATAACACCT",2,16.23,8.96,-1.87,0.23,2.07,1.12,0.02,">1 nonsynonymous","T100K K114Y G155L S184N",4
"lib2","SARS-CoV-2","ATGATCTCCCTAAGGA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","N13V V37* G101P S139R Y175S",5
"lib2","SARS-CoV-2","ATGATGAAACGTATCA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5* D34R P82K S113L",4
"lib2","SARS-CoV-2","ATGATGAAAGTATTGG",3,85.35,8.47,-2.36,0.14,2.65,1.02,0.01,">1 nonsynonymous","P54G N109K Y175M",3
"lib2","SARS-CoV-2","ATGATGAAATGTACCA",16,92.69,8.75,-2.09,0.18,1.5,1,0.01,">1 nonsynonymous","G9K Y50L T201W",3
"lib2","SARS-CoV-2","ATGATGAACAGTCGTT",2,17.14,6.34,-4.5,1.15,1.5,1.21,0.05,">1 nonsynonymous","K94L Y119G K199W",3
"lib2","SARS-CoV-2","ATGATGAAGACGAAGA",2,41.72,9.9,-0.94,0.1,2.3,1.12,0.01,">1 nonsynonymous","K94H T100A P149N",3
"lib2","SARS-CoV-2","ATGATGACTCTTTTAT",2,41.92,8.14,-2.69,0.13,2.68,1.08,0.01,">1 nonsynonymous","C6W Q168D",2
"lib2","SARS-CoV-2","ATGATGAGAACATACT",6,28.87,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","N40I C61T G86F D90M N120H L183I",6
"lib2","SARS-CoV-2","ATGATGAGCCTACAAA",8,201.66,10.06,-0.77,0.07,2.75,1.09,0,">1 nonsynonymous","N107T P197L",2
"lib2","SARS-CoV-2","ATGATGAGTGGATATG",12,355.4,10.27,-0.57,0.03,2.94,1.04,0,">1 nonsynonymous","Q144P P149Y",2
"lib2","SARS-CoV-2","ATGATGATATAGTATT",3,0.68,NA,NA,NA,NA,NA,NA,"stop","C49* C61N A89M D97L",4
"lib2","SARS-CoV-2","ATGATGATCCGCACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8V S41* P149*",3
"lib2","SARS-CoV-2","ATGATGATCGCCAATG",8,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A67P V77Q K199M",4
"lib2","SARS-CoV-2","ATGATGATCTACCCGC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","W106* L111I",2
"lib2","SARS-CoV-2","ATGATGATTTTTGAGT",11,82.58,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","ATGATGCAAGTGCGTA",2,13.3,10.73,-0.11,0.08,2.9,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATGCCCTAAAGAC",4,23.16,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R27I D112E L131E Q144I",4
"lib2","SARS-CoV-2","ATGATGCCTCCGAATG",11,82.35,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6A T15R S113Q N120S",4
"lib2","SARS-CoV-2","ATGATGCGTACGGACG",3,165.06,10.01,-0.83,0.04,2.74,1.07,0,">1 nonsynonymous","G9K G116S K128L",3
"lib2","SARS-CoV-2","ATGATGGAGCGGGCTG",8,79.93,10.81,-0.03,0.05,2.91,1.08,0,"1 nonsynonymous","S43T",1
"lib2","SARS-CoV-2","ATGATGGCACAATAAC",4,0.44,NA,NA,NA,NA,NA,NA,"stop","N4D G9* D75M P149L E154D S200N",6
"lib2","SARS-CoV-2","ATGATGGCAGAGAATT",8,83.6,6.83,-4,0.25,1.5,1.1,0.01,">1 nonsynonymous","F44L C61Y Y143S",3
"lib2","SARS-CoV-2","ATGATGGGCACGTAAT",2,1.42,NA,NA,NA,NA,NA,NA,"stop","C6A G51* C61P F99W G146L",5
"lib2","SARS-CoV-2","ATGATGGGCGTTCGAG",3,56.83,8.71,-2.12,0.08,2.44,1.08,0,">1 nonsynonymous","C6W N30L K87G P197Q",4
"lib2","SARS-CoV-2","ATGATGGTATAAAATT",10,57.27,9.27,-1.57,0.1,1.61,1.04,0,">1 nonsynonymous","V37M I104N",2
"lib2","SARS-CoV-2","ATGATGGTATAAACCG",22,130.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K87E L95Y",2
"lib2","SARS-CoV-2","ATGATGTAAATAGCGA",8,36.68,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C31S L95K",2
"lib2","SARS-CoV-2","ATGATGTAACTTGATA",5,76.76,9.99,-0.85,0.05,2.75,1.06,0,">1 nonsynonymous","S19H S41Y T100S",3
"lib2","SARS-CoV-2","ATGATGTACGCATATA",3,7.26,10.53,-0.3,0.14,2.9,1.05,0,">1 nonsynonymous","N1L N64L",2
"lib2","SARS-CoV-2","ATGATGTAGATAGACG",8,72.86,9.69,-1.15,0.06,2.26,1.05,0,">1 nonsynonymous","C6S A14L",2
"lib2","SARS-CoV-2","ATGATGTCAAAATGAT",5,28.87,10.48,-0.35,0.09,2.85,1.05,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","ATGATGTCGGCATTAT",3,105.26,10.74,-0.09,0.04,2.9,1.12,0,">1 nonsynonymous","D98Q N120D P197S T201R",4
"lib2","SARS-CoV-2","ATGATGTGACTCCGTC",2,17.51,8.03,-2.8,0.19,2.69,1,0.01,">1 nonsynonymous","N120Y N171D",2
"lib2","SARS-CoV-2","ATGATGTGGATTAAAC",12,85.47,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","I104F A105D Y121T",3
"lib2","SARS-CoV-2","ATGATGTTACATTGCA",17,261.39,10.78,-0.06,0.05,2.93,1.08,0,">1 nonsynonymous","I28F F160V",2
"lib2","SARS-CoV-2","ATGATTACTTTCTACG",5,17.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N40Y K87L D98V A105S Y121A G146K V153Y",7
"lib2","SARS-CoV-2","ATGATTAGAGTAGTTA",1,114.08,10.72,-0.11,0.03,3,1.03,0,"1 nonsynonymous","S29K",1
"lib2","SARS-CoV-2","ATGATTAGATCCTTAG",3,33.09,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10A C61R G146S Q168S Q176P",5
"lib2","SARS-CoV-2","ATGATTATGCCGTCTA",8,56.09,7.14,-3.69,0.18,1.5,1.14,0.01,">1 nonsynonymous","Q84R C158K",2
"lib2","SARS-CoV-2","ATGATTATTTGACAAG",6,1.08,NA,NA,NA,NA,NA,NA,"stop","N58* G146V",2
"lib2","SARS-CoV-2","ATGATTCAATTGTTTC",12,45.86,9.93,-0.9,0.13,1.96,1.1,0.01,">1 nonsynonymous","L57W V65Y",2
"lib2","SARS-CoV-2","ATGATTCACATTCCCC",1,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28G C49V T55C L122A P169I",5
"lib2","SARS-CoV-2","ATGATTCATGAAATCC",4,30.36,10.74,-0.1,0.07,2.87,1.14,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","ATGATTCCGCAGCCCG",2,41.58,10.81,-0.03,0.11,2.8,1.18,0,">1 nonsynonymous","F44W T201K",2
"lib2","SARS-CoV-2","ATGATTCGACGGTAAT",8,66.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25Q S43G L57R G117L",4
"lib2","SARS-CoV-2","ATGATTCTAATATCTT",7,125.7,10.86,0.02,0.06,2.94,1.08,0,"1 nonsynonymous","F62C",1
"lib2","SARS-CoV-2","ATGATTCTGCATTAGA",5,159.62,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9S S41P C150G",3
"lib2","SARS-CoV-2","ATGATTCTGCTGTTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L S41C F99P K128C G146L",5
"lib2","SARS-CoV-2","ATGATTGACAAAATAC",3,67.63,10.57,-0.27,0.05,2.96,1.06,0,">1 nonsynonymous","T100Y G166N",2
"lib2","SARS-CoV-2","ATGATTGACACGGGCG",10,171.34,10.34,-0.49,0.03,2.82,1.11,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","ATGATTGACCAAACAC",12,113.91,9.24,-1.59,0.08,1.71,1.12,0,">1 nonsynonymous","T63C W106V",2
"lib2","SARS-CoV-2","ATGATTGACCTAAGAA",2,7.51,7.56,-3.28,2,1.5,1.24,0.03,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","ATGATTGAGATAGTGT",4,84.06,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37S A42S W106T D137R",4
"lib2","SARS-CoV-2","ATGATTGATATCGACA",2,2.91,NA,NA,NA,NA,NA,NA,"stop","C61* G146L Y165V",3
"lib2","SARS-CoV-2","ATGATTGATATGCCAC",7,49.94,8.02,-2.82,0.42,1.5,1,0.07,">1 nonsynonymous","T55Y D98V G116R Y123G",4
"lib2","SARS-CoV-2","ATGATTGCTCCATATA",1,19.69,10.55,-0.29,0.05,2.9,1.1,0,"1 nonsynonymous","P7M",1
"lib2","SARS-CoV-2","ATGATTGGACAAGACA",4,19.69,10.15,-0.68,0.08,2.7,1.03,0,">1 nonsynonymous","A14H V37A T100S",3
"lib2","SARS-CoV-2","ATGATTGGCATATACG",5,82.13,10.91,0.07,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATTGGGAATCAAA",8,226.47,10.22,-0.62,0.02,2.94,1.03,0,">1 nonsynonymous","R73K K114A S129P",3
"lib2","SARS-CoV-2","ATGATTGTAATACCAC",3,10.45,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","N4A F8P R27F N64S T100R W106M E141K",7
"lib2","SARS-CoV-2","ATGATTGTAATAGCGT",3,38.4,10.81,-0.02,0.03,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGATTGTGTCTCCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","S113* Y123K",2
"lib2","SARS-CoV-2","ATGATTTACCTTAGGT",3,5.19,10.57,-0.26,0.11,2.89,1.16,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","ATGATTTAGACAACTA",2,26.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I88K L162Y",2
"lib2","SARS-CoV-2","ATGATTTAGACCTCGG",4,3.53,NA,NA,NA,NA,NA,NA,"stop","E76A G83N K87* S129L A145V T201R",6
"lib2","SARS-CoV-2","ATGATTTAGTCCTCTT",7,119.19,10.79,-0.05,0.03,2.97,1.04,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","ATGATTTCACATCAAC",2,41.44,10.66,-0.18,0.05,2.88,1.09,0,"1 nonsynonymous","E135H",1
"lib2","SARS-CoV-2","ATGATTTGATTTCCGC",3,10.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T55C Q144S L183D",3
"lib2","SARS-CoV-2","ATGATTTGTACTAGAT",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R G9C G51Q E141L",4
"lib2","SARS-CoV-2","ATGATTTTAGTAAGGG",3,47.17,10.96,0.12,0.07,2.93,1.09,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","ATGATTTTTCTTTTAA",5,43.57,6.15,-4.69,0.84,1.5,1.15,0.02,">1 nonsynonymous","K87Q R124M",2
"lib2","SARS-CoV-2","ATGCAAAAAAGAATAA",12,246.15,7.19,-3.64,0.15,1.5,1.12,0.01,">1 nonsynonymous","S69Q D97L Y175S",3
"lib2","SARS-CoV-2","ATGCAAAAAAGGTGGT",2,3.48,NA,NA,NA,NA,NA,NA,"stop","T46L N64K Y91P F99L R136K V180*",6
"lib2","SARS-CoV-2","ATGCAAAAATCAAACA",1,34.31,8.74,-2.1,0.06,2.93,1.06,0,">1 nonsynonymous","T100C G166C V173G",3
"lib2","SARS-CoV-2","ATGCAAAAGGGCTCCT",10,117.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D90V K94L N107S L188S",4
"lib2","SARS-CoV-2","ATGCAAAAGTAAATAG",2,24.99,8.97,-1.86,0.15,1.9,1.12,0.01,">1 nonsynonymous","R27A S43A G86C",3
"lib2","SARS-CoV-2","ATGCAAAAGTTAGTAG",13,102.67,9.25,-1.58,0.08,1.73,1.06,0,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","ATGCAAAAGTTCTTAT",2,5.3,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S69L S108M",2
"lib2","SARS-CoV-2","ATGCAAACCCTATCCA",2,26.33,10.67,-0.16,0.05,3,1,0,">1 nonsynonymous","R78L K114V",2
"lib2","SARS-CoV-2","ATGCAAACGACACAGG",11,32.37,9.36,-1.48,0.12,1.87,1.04,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","ATGCAAACTTTAAGAC",1,59.36,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N64G D137V C150G Q176L",4
"lib2","SARS-CoV-2","ATGCAAATAAAGTAGA",15,171.34,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38A T63F A105V E154C F160L",5
"lib2","SARS-CoV-2","ATGCAAATAATGTGGG",3,36.77,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6G G86V Y93C N118R S184V",5
"lib2","SARS-CoV-2","ATGCAAATACATTATT",9,3.54,NA,NA,NA,NA,NA,NA,"stop","I2N A18S A22C Y121L I142*",5
"lib2","SARS-CoV-2","ATGCAAATACCTATCG",2,32.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90R N107L C150R",3
"lib2","SARS-CoV-2","ATGCAAATAGTAAGAA",7,113.1,10.83,0,0.04,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCAAATCAAATTAA",8,114.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12I N92L N157F Y178N",4
"lib2","SARS-CoV-2","ATGCAAATGCACTTAT",4,64.41,9.51,-1.33,0.11,2.22,1.09,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","ATGCAAATGGGATAAG",6,64.46,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T63V G172L",2
"lib2","SARS-CoV-2","ATGCAACAACAAAGGA",3,19.26,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C102Q G152I",2
"lib2","SARS-CoV-2","ATGCAACAATACCGAG",4,10.95,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","A14L I104K P149F C158L T170C",5
"lib2","SARS-CoV-2","ATGCAACAATCAGCAA",4,61.76,7.81,-3.03,0.28,1.5,1.05,0.03,"1 nonsynonymous","P82D",1
"lib2","SARS-CoV-2","ATGCAACAATCGACAC",6,51.03,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N13I L60Q S69K K198A",4
"lib2","SARS-CoV-2","ATGCAACAATCTATGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W V37D I72T G101S T140K Y159K V181M",7
"lib2","SARS-CoV-2","ATGCAACAATGAAATA",8,1.1,NA,NA,NA,NA,NA,NA,"stop","I2P S36* L95R Q168R",4
"lib2","SARS-CoV-2","ATGCAACACAACCGTA",3,127.76,6,-4.84,1.57,1.5,1.17,0.01,">1 nonsynonymous","A42V L57N A89L W106R T148P V173Q",6
"lib2","SARS-CoV-2","ATGCAACACAACCTAG",2,26.7,8.04,-2.79,0.14,1.61,1.06,0.01,">1 nonsynonymous","T100N F167L",2
"lib2","SARS-CoV-2","ATGCAACCAATATGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L P82V T201G",3
"lib2","SARS-CoV-2","ATGCAACCCAACCGAA",1,19.59,10.73,-0.11,0.04,3,1.01,0,">1 nonsynonymous","N120F S147Q K199I",3
"lib2","SARS-CoV-2","ATGCAACCCACATATT",6,65.48,10.83,0,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCAACCCTCGGTGG",14,5.82,NA,NA,NA,NA,NA,NA,"stop","K56* S200Y",2
"lib2","SARS-CoV-2","ATGCAACCTAAACTGT",7,138.26,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F44T L125K N171R A190L C195L",5
"lib2","SARS-CoV-2","ATGCAACCTAATGGCT",3,62.68,10.26,-0.57,0.06,3,1.02,0,">1 nonsynonymous","G9Q V115N F160V T201M",4
"lib2","SARS-CoV-2","ATGCAACGAAAATTAT",5,61.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R27L G51F G83R G116L F167L",5
"lib2","SARS-CoV-2","ATGCAACGAAATTCAT",11,136.88,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y21R R27K L57M F134C",4
"lib2","SARS-CoV-2","ATGCAACGCATGTAGA",1,26.33,9.29,-1.55,0.05,3,1.04,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","ATGCAACTAAGCGACA",6,79.92,11.02,0.18,0.05,2.99,1.01,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","ATGCAACTCGGATGGT",8,766.63,10.73,-0.1,0.02,2.96,1.04,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","ATGCAAGAATATTTTA",4,23.08,10.06,-0.78,0.06,2.89,1,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","ATGCAAGACCCTGCTC",6,58.82,10.62,-0.22,0.09,2.91,1.01,0,"1 nonsynonymous","Y35A",1
"lib2","SARS-CoV-2","ATGCAAGAGTTTTTAA",4,24.19,10.32,-0.52,0.06,2.98,1,0,">1 nonsynonymous","Y66S R78H L187K",3
"lib2","SARS-CoV-2","ATGCAAGATTACCGAA",8,53.39,10.21,-0.62,0.06,2.9,1.02,0,">1 nonsynonymous","N58Y N64R",2
"lib2","SARS-CoV-2","ATGCAAGCAACAGTCT",2,49.63,8.71,-2.12,0.14,1.99,1.02,0.01,">1 nonsynonymous","S53P C102V L125P",3
"lib2","SARS-CoV-2","ATGCAAGCACGAATTT",3,71.67,7.64,-3.19,0.26,1.5,1.04,0.02,">1 nonsynonymous","R27A D59I L122Q Q176L",4
"lib2","SARS-CoV-2","ATGCAAGCGAATTACA",14,0,NA,NA,NA,NA,NA,NA,"stop","A89G T140*",2
"lib2","SARS-CoV-2","ATGCAAGCTAATGTAA",2,26.31,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9N S29V Y91P N107C P149T",5
"lib2","SARS-CoV-2","ATGCAAGGACAAATCC",1,67.25,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37H N58P W106I R136I P161V",5
"lib2","SARS-CoV-2","ATGCAAGTAGTGAAAA",9,71.6,8.57,-2.26,0.2,1.5,1.06,0.02,">1 nonsynonymous","W106K P177A",2
"lib2","SARS-CoV-2","ATGCAAGTGCTTTGGA",24,142.57,9.16,-1.68,0.16,1.5,1.04,0.01,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","ATGCAAGTGTTAACCG",8,52.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D98P W106L L122N T201K",4
"lib2","SARS-CoV-2","ATGCAATAAAGTAGCA",2,32.85,10.41,-0.43,0.05,2.89,1.06,0,">1 nonsynonymous","K114L L183M",2
"lib2","SARS-CoV-2","ATGCAATATATGGTGA",5,62.95,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y35W N107L E135A E154M",4
"lib2","SARS-CoV-2","ATGCAATCAATATTGC",15,168.63,9.81,-1.02,0.08,2.38,1.01,0,">1 nonsynonymous","F47T G152T",2
"lib2","SARS-CoV-2","ATGCAATCATATTATA",17,63.1,6.52,-4.32,0.32,1.55,1.14,0.01,">1 nonsynonymous","N1L C6M T15C G101M N120T",5
"lib2","SARS-CoV-2","ATGCAATCATGAATCT",4,185.83,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K87E Y119L P177T S200C",4
"lib2","SARS-CoV-2","ATGCAATCTTTCGCAT",3,39.99,8.38,-2.45,0.12,2.84,1.11,0.01,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","ATGCAATGATAGAACC",13,216.02,10.83,-0.01,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCAATGATATGAAT",4,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106N T140C F156Q S184K",4
"lib2","SARS-CoV-2","ATGCAATGTTGAGTGT",9,323.78,10.1,-0.73,0.03,2.7,1.04,0,">1 nonsynonymous","L5D Y91V",2
"lib2","SARS-CoV-2","ATGCAATTAAGCATGT",5,50.17,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13S G86V E154S",3
"lib2","SARS-CoV-2","ATGCAATTGAAAGAGA",2,29.19,9.93,-0.9,0.07,2.89,1.01,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","ATGCAATTTTCTAATC",2,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122M L183H",2
"lib2","SARS-CoV-2","ATGCACAAATGTCTAA",4,29.3,9.12,-1.72,0.14,1.6,1.12,0,">1 nonsynonymous","Y91T E141V",2
"lib2","SARS-CoV-2","ATGCACAACAGTTTGA",1,32.78,9.97,-0.86,0.15,2.61,1.03,0.01,">1 nonsynonymous","K56W N120Y S129T",3
"lib2","SARS-CoV-2","ATGCACAATAAATTCG",10,48.77,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V11F Y39V S45L G101L L162K Y178P",6
"lib2","SARS-CoV-2","ATGCACACAAAAATAT",14,59.43,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A105E Y123G C158D",3
"lib2","SARS-CoV-2","ATGCACACAAGATATC",1,10.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L95A N120G",2
"lib2","SARS-CoV-2","ATGCACACAATCTAAT",5,29.79,6.18,-4.66,0.76,2.92,1.25,0.01,">1 nonsynonymous","L60P K87N N92K V103N",4
"lib2","SARS-CoV-2","ATGCACACGGTGGAAG",1,33.62,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37S F70M P177E",3
"lib2","SARS-CoV-2","ATGCACACTGAAAGCG",1,35.02,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T55L F126C P177K",3
"lib2","SARS-CoV-2","ATGCACAGGTAGATTA",5,117.25,10.78,-0.05,0.05,2.91,1.1,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","ATGCACATGGGTATAG",2,17.67,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D97Q L122Q L162S",3
"lib2","SARS-CoV-2","ATGCACCAAACTCTCC",1,3.87,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGCACCAAGATGATC",7,60.25,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N1A D68E L125V G166D",4
"lib2","SARS-CoV-2","ATGCACCGATTGATTC",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I D98V V182Q",3
"lib2","SARS-CoV-2","ATGCACCGGCCTAAAA",4,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110S R124E E186I",3
"lib2","SARS-CoV-2","ATGCACCTCTGCATAG",2,57.16,10.56,-0.28,0.06,2.97,1.02,0,"1 nonsynonymous","E135H",1
"lib2","SARS-CoV-2","ATGCACGAAGTAAAAG",2,64.35,10.83,0,0.05,2.93,1.08,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","ATGCACGGCACACGAA",10,187.78,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G86L T148F",2
"lib2","SARS-CoV-2","ATGCACGGCCTCCGCA",2,11.77,6,-4.84,2,3,1.06,0,">1 nonsynonymous","I2S V37L F70N P82Q V173R",5
"lib2","SARS-CoV-2","ATGCACGGGTAAACAG",1,21.1,6,-4.84,0.98,2.71,1.12,0.01,">1 nonsynonymous","I88R Y119V",2
"lib2","SARS-CoV-2","ATGCACGTACCCTGCT",8,123.79,10.77,-0.07,0.05,2.94,1.09,0,"1 nonsynonymous","I138D",1
"lib2","SARS-CoV-2","ATGCACTCAAAGCGAA",1,13.15,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K56W C158E Q168L",3
"lib2","SARS-CoV-2","ATGCACTCGACTATTA",4,47.87,6.81,-4.03,0.28,1.5,1.09,0.01,">1 nonsynonymous","I88L N109K Y123G",3
"lib2","SARS-CoV-2","ATGCACTGTTGTGCGA",15,157.71,9.93,-0.91,0.04,2.93,1.05,0,">1 nonsynonymous","S147P G166C",2
"lib2","SARS-CoV-2","ATGCACTTACAAACAA",6,31.84,9.78,-1.05,0.26,1.5,1,0.04,">1 nonsynonymous","C49G T100K Q163V",3
"lib2","SARS-CoV-2","ATGCAGAAAAGTTTGT",1,11.06,6,-4.84,2,3,1,0,">1 nonsynonymous","F12L V37L S45T E141V V181R",5
"lib2","SARS-CoV-2","ATGCAGAAACCAACTG",2,112.5,10.87,0.03,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCAGAATTCACGCA",9,78.07,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5R N92L",2
"lib2","SARS-CoV-2","ATGCAGACCTTAACAT",1,50.35,9.94,-0.9,0.06,2.69,1.08,0,"1 nonsynonymous","N13C",1
"lib2","SARS-CoV-2","ATGCAGACTTATAAAT",8,34.6,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T55M V77F L95E",3
"lib2","SARS-CoV-2","ATGCAGAGAACTGTGG",7,68.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M S19F",2
"lib2","SARS-CoV-2","ATGCAGAGAGCTAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W106L E141* K199S",3
"lib2","SARS-CoV-2","ATGCAGATGTGAGGTT",6,230.44,10.21,-0.63,0.06,2.67,1.06,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","ATGCAGATTAGTCGAC",4,40.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F62T D68W",2
"lib2","SARS-CoV-2","ATGCAGCCGTTGGTCT",3,26.69,10.74,-0.09,0.07,2.98,1.01,0,">1 nonsynonymous","F62Y D97G",2
"lib2","SARS-CoV-2","ATGCAGCCTAAAATGT",3,0.32,NA,NA,NA,NA,NA,NA,"stop","V11* S43A",2
"lib2","SARS-CoV-2","ATGCAGCGAATAAAGT",5,125.18,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F99L W106V F134A",3
"lib2","SARS-CoV-2","ATGCAGCGTTAAATAA",2,79.46,10.79,-0.05,0.03,2.91,1.1,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","ATGCAGCGTTTAAAAA",4,126.92,9.85,-0.98,0.08,2.22,1.02,0,">1 nonsynonymous","F12L N64K L183V",3
"lib2","SARS-CoV-2","ATGCAGCTGAAGTGTT",5,34.43,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A33H N157V",2
"lib2","SARS-CoV-2","ATGCAGGAAGTAACAG",4,405.59,10.07,-0.77,0.06,2.55,1.01,0,">1 nonsynonymous","N13L V52I C61R K128P K198A",5
"lib2","SARS-CoV-2","ATGCAGGATTTAAGAC",4,106.81,9.89,-0.95,0.03,2.96,1.04,0,">1 nonsynonymous","L5K T170F",2
"lib2","SARS-CoV-2","ATGCAGGCACTCTTAA",8,92.37,9.92,-0.92,0.07,2.38,1.03,0,">1 nonsynonymous","N40I T63G",2
"lib2","SARS-CoV-2","ATGCAGGCGCGCGACT",1,9.34,6.29,-4.54,0.86,1.67,1.19,0.01,">1 nonsynonymous","S43D Y91N K128G D137S",4
"lib2","SARS-CoV-2","ATGCAGGCGGACCGGC",3,20.07,9.77,-1.06,0.15,2.24,1.13,0.01,">1 nonsynonymous","N4M A81V I138E",3
"lib2","SARS-CoV-2","ATGCAGGTCTTCCATA",2,16.3,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","P54L L95Y N118F A192S",4
"lib2","SARS-CoV-2","ATGCAGGTGACAATCC",6,9.11,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","R16Q I80K D90Y D97T G101D",5
"lib2","SARS-CoV-2","ATGCAGTATTATTGAA",2,43.63,10.84,0.01,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCAGTCTAATTCAT",1,17.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9R P177L",2
"lib2","SARS-CoV-2","ATGCAGTCTGATGTAG",10,71.74,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","G51I L60M S108L",3
"lib2","SARS-CoV-2","ATGCAGTTACGCGCTA",2,6.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R S129V",2
"lib2","SARS-CoV-2","ATGCAGTTAGAACGCC",5,76.07,10.11,-0.72,0.07,2.49,1.12,0,"1 nonsynonymous","P133M",1
"lib2","SARS-CoV-2","ATGCATAACGAAAAGC",3,19.94,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D68M V103M V182L",3
"lib2","SARS-CoV-2","ATGCATAACTAAGTAC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","S45R V52P E141* G155V N171Y",5
"lib2","SARS-CoV-2","ATGCATAATTCGGTAT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7M F99N I104Y",3
"lib2","SARS-CoV-2","ATGCATACCTCATTTC",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W F17S P161L L188I",4
"lib2","SARS-CoV-2","ATGCATAGAACAGGAA",7,36.82,11,0.17,0.04,3,1.01,0,">1 nonsynonymous","K128S P197M",2
"lib2","SARS-CoV-2","ATGCATAGGTTGGGTA",2,53.86,6,-4.84,1.61,1.5,1.14,0.01,">1 nonsynonymous","Y39L G116S G172L",3
"lib2","SARS-CoV-2","ATGCATATCAGACCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98P",1
"lib2","SARS-CoV-2","ATGCATATGACTGACA",5,31.13,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A14L N107A E141M N157H",4
"lib2","SARS-CoV-2","ATGCATATGCTCAATA",3,95.08,8.97,-1.86,0.08,1.74,1.11,0,">1 nonsynonymous","L95C N120L",2
"lib2","SARS-CoV-2","ATGCATCAATCACATA",3,19.78,7.32,-3.51,0.35,1.5,1.14,0.04,">1 nonsynonymous","L60M L95A N120H T201M",4
"lib2","SARS-CoV-2","ATGCATCACATGGTTG",5,4.49,NA,NA,NA,NA,NA,NA,"stop","S45C K87*",2
"lib2","SARS-CoV-2","ATGCATCACGATGGAG",2,37.61,6.39,-4.45,0.62,1.5,1.15,0.02,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","ATGCATCATTCATAAT",5,39.27,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","A33R I88L P96K G152V P169V",5
"lib2","SARS-CoV-2","ATGCATCCCAACCCTA",2,27.54,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","G146L P149S F160D P169L",4
"lib2","SARS-CoV-2","ATGCATCCCCACGAAG",12,144.67,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F62V A105E N120I F126I",4
"lib2","SARS-CoV-2","ATGCATCGAATCAATC",11,217.33,10.82,-0.01,0.05,2.96,1.06,0,"1 nonsynonymous","N130E",1
"lib2","SARS-CoV-2","ATGCATGAAGAAAACA",2,38.85,9.42,-1.42,0.08,1.89,1.03,0,">1 nonsynonymous","S43L P82S",2
"lib2","SARS-CoV-2","ATGCATGACCAACCGG",8,100.62,9.62,-1.21,0.08,2.15,1.04,0,">1 nonsynonymous","L5V R16K D90V G155S",4
"lib2","SARS-CoV-2","ATGCATGACCAACGCC",6,2.6,NA,NA,NA,NA,NA,NA,"stop","A42F I142*",2
"lib2","SARS-CoV-2","ATGCATGGATGATACC",4,39.44,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","A33W A105L F167I G174K",4
"lib2","SARS-CoV-2","ATGCATGGTGCATTTT",3,34.44,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N4T P82Q P149S F167L",4
"lib2","SARS-CoV-2","ATGCATGTAAGTGTCA",10,120.22,9.68,-1.16,0.04,2.88,1.1,0,"1 nonsynonymous","N118R",1
"lib2","SARS-CoV-2","ATGCATTATAACTGGT",3,40.71,6.04,-4.8,0.65,1.5,1.15,0.01,">1 nonsynonymous","D68L G86W F160L",3
"lib2","SARS-CoV-2","ATGCATTATTAATAAG",3,81.62,10.7,-0.13,0.03,2.96,1.03,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","ATGCATTCAATAATCA",10,162.74,10.86,0.02,0.05,2.93,1.09,0,">1 nonsynonymous","D59K K199S",2
"lib2","SARS-CoV-2","ATGCATTCTATGAGTA",12,112.72,9.36,-1.48,0.05,2.97,1.06,0,">1 nonsynonymous","L5S R16S Y119T V173N",4
"lib2","SARS-CoV-2","ATGCATTGAAGAGTGA",7,22.4,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D34T P54F V71L F160G",4
"lib2","SARS-CoV-2","ATGCATTGCATTAATT",12,32.98,7.93,-2.9,0.29,1.5,1.11,0.03,">1 nonsynonymous","L60Q Q84D E135H P169K",4
"lib2","SARS-CoV-2","ATGCATTGGTAAAAAA",5,55.56,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9Y Y50D",2
"lib2","SARS-CoV-2","ATGCATTGTCAAATTA",5,87.33,10.06,-0.77,0.06,2.56,1.04,0,">1 nonsynonymous","A105C T148L T201I",3
"lib2","SARS-CoV-2","ATGCATTGTCTATGTG",1,19.13,9.19,-1.64,0.15,2.4,1.11,0.01,"1 nonsynonymous","L162Y",1
"lib2","SARS-CoV-2","ATGCATTTGGCGTGCA",7,65.4,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A22L I28P N151V P197R",4
"lib2","SARS-CoV-2","ATGCCAAACAGCTTAC",7,84.43,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12S G51D D59N",3
"lib2","SARS-CoV-2","ATGCCAAATGACCACT",5,1.18,NA,NA,NA,NA,NA,NA,"stop","F12G K87* E141Y",3
"lib2","SARS-CoV-2","ATGCCAAATTGCCCTG",3,42.87,10.67,-0.16,0.06,2.87,1.14,0,">1 nonsynonymous","T63A S139G S200R",3
"lib2","SARS-CoV-2","ATGCCAACAATTGTGA",6,0.2,NA,NA,NA,NA,NA,NA,"stop","C49* F167Q",2
"lib2","SARS-CoV-2","ATGCCAACACCTCCAT",3,34.2,10.93,0.09,0.05,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCAAGCCCACTAT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151G F167Y V173S",3
"lib2","SARS-CoV-2","ATGCCAAGGAGATTTC",3,14.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S69V E141I",2
"lib2","SARS-CoV-2","ATGCCAAGGCGAAAGT",4,57.59,10.21,-0.63,0.06,2.51,1,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","ATGCCAAGTGATCCGA",9,1.46,NA,NA,NA,NA,NA,NA,"stop","F8D A89M S129* L183D",4
"lib2","SARS-CoV-2","ATGCCAATATGCCGAA",2,99.13,9.62,-1.22,0.03,2.82,1.11,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","ATGCCAATCTAAGCCA",2,2.1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCAATCTCAATTA",6,4.2,NA,NA,NA,NA,NA,NA,"stop","A81* Y91A N107I G155L",4
"lib2","SARS-CoV-2","ATGCCAATGAGAGCTG",10,109.58,6.16,-4.68,0.71,1.5,1.12,0.01,">1 nonsynonymous","K48F Y175K",2
"lib2","SARS-CoV-2","ATGCCAATTAAACAAG",3,40.36,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6I R25K P82K I88T D112R E135N G155V",7
"lib2","SARS-CoV-2","ATGCCAATTCGCGAAA",4,2.07,NA,NA,NA,NA,NA,NA,"stop","V32A D59A L111V Y159N Y175*",5
"lib2","SARS-CoV-2","ATGCCACAAAGGGTAC",2,21.93,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","I80S F167R V181N",3
"lib2","SARS-CoV-2","ATGCCACAACCCCTTA",1,13.95,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14S F70M Y93C T140E",4
"lib2","SARS-CoV-2","ATGCCACAATAAAGAT",4,1.07,NA,NA,NA,NA,NA,NA,"stop","D59T G74L K114W L122* Y175*",5
"lib2","SARS-CoV-2","ATGCCACAATATACAG",1,51.01,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I80P L122S",2
"lib2","SARS-CoV-2","ATGCCACAGGCACAAA",2,83.8,10.78,-0.05,0.04,2.94,1.08,0,">1 nonsynonymous","K128Y S139T",2
"lib2","SARS-CoV-2","ATGCCACCTCCCGAAA",2,66.99,10.78,-0.05,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCACTGCACGTAT",18,220.27,10.31,-0.52,0.03,2.82,1.06,0,">1 nonsynonymous","T3C T15P",2
"lib2","SARS-CoV-2","ATGCCAGAAAACCACT",2,13.24,10.86,0.02,0.08,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCAGAACTATCCG",12,201.07,10.66,-0.17,0.03,2.97,1.05,0,">1 nonsynonymous","F8L S41R",2
"lib2","SARS-CoV-2","ATGCCAGACGAACATG",3,88.12,8.18,-2.65,0.05,2.66,1.05,0,">1 nonsynonymous","N120I Y175S",2
"lib2","SARS-CoV-2","ATGCCAGGGCCGTAAA",3,37.99,8.68,-2.16,0.21,1.5,1,0.02,">1 nonsynonymous","E10I L111R G155Y S200G",4
"lib2","SARS-CoV-2","ATGCCAGTCTTCCTTG",5,21.73,6.04,-4.79,1.17,1.5,1.19,0.03,">1 nonsynonymous","C61S D97P N120K P149Q C158S",5
"lib2","SARS-CoV-2","ATGCCATAAACTAAAG",7,37.59,9.28,-1.56,0.18,1.5,1,0.01,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","ATGCCATTAGATAGCT",1,8.87,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K87G N120M Y175T",3
"lib2","SARS-CoV-2","ATGCCCAAAAAGTGTG",4,22.18,9.5,-1.34,0.17,2.63,1.17,0.01,">1 nonsynonymous","F44I G116C V173L",3
"lib2","SARS-CoV-2","ATGCCCAATCTCTCCT",2,10.34,9.55,-1.28,0.1,2.01,1,0.01,">1 nonsynonymous","P7T N58Y D75M T148C",4
"lib2","SARS-CoV-2","ATGCCCACCCGGCTTG",2,43.83,10.62,-0.21,0.07,2.94,1.05,0,">1 nonsynonymous","N1S I28W S45A S184N",4
"lib2","SARS-CoV-2","ATGCCCACTATACCAA",2,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R S200P",2
"lib2","SARS-CoV-2","ATGCCCACTTTGCTAA",4,78.06,8.12,-2.72,0.15,1.95,1.1,0.01,">1 nonsynonymous","V37Y K87R N157Y S200V",4
"lib2","SARS-CoV-2","ATGCCCCATGACTTCA",1,44.17,10.57,-0.27,0.05,2.93,1.02,0,">1 nonsynonymous","L5F N40T V173F",3
"lib2","SARS-CoV-2","ATGCCCCCAGACAAAT",2,53.59,10.69,-0.15,0.02,3,1.01,0,"1 nonsynonymous","A89P",1
"lib2","SARS-CoV-2","ATGCCCCCTATAAATG",15,3.75,NA,NA,NA,NA,NA,NA,"stop","F12* L131I Y159R Q176C",4
"lib2","SARS-CoV-2","ATGCCCCTAAAAGGAT",1,9.73,10.85,0.01,0.08,3,1.04,0,"1 nonsynonymous","A42K",1
"lib2","SARS-CoV-2","ATGCCCGACCGTTTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q144S F156* A190C",3
"lib2","SARS-CoV-2","ATGCCCGATACATAAA",2,26.14,10.88,0.05,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCCGATGCGGGAA",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82I S113M",2
"lib2","SARS-CoV-2","ATGCCCGCCACAGTTT",3,59.99,10.76,-0.08,0.05,2.84,1.14,0,"1 nonsynonymous","T3M",1
"lib2","SARS-CoV-2","ATGCCCGGATACGATC",1,7.37,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L57N N118P D137C N151K Y159G F185C",6
"lib2","SARS-CoV-2","ATGCCCGTTCGCAAGC",13,0.79,NA,NA,NA,NA,NA,NA,"stop","N1M P7R R16C I88* P96A F156I",6
"lib2","SARS-CoV-2","ATGCCCTAAAAGTGAA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","N58V Y91* P169L",3
"lib2","SARS-CoV-2","ATGCCCTACTGGCATG",5,49.07,10.78,-0.06,0.05,2.9,1.12,0,">1 nonsynonymous","D59S L122Y",2
"lib2","SARS-CoV-2","ATGCCCTAGCTGGATC",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Q W106K P161R",3
"lib2","SARS-CoV-2","ATGCCCTCAGCCAAAA",7,126.29,10.39,-0.45,0.04,2.84,1.05,0,">1 nonsynonymous","L5W S43Y T85A P133G",4
"lib2","SARS-CoV-2","ATGCCCTCCACTAGTG",1,49.86,10.36,-0.48,0.11,2.72,1.08,0,">1 nonsynonymous","D59L P149M",2
"lib2","SARS-CoV-2","ATGCCGAAAAACCTTG",10,15.06,6.28,-4.55,0.64,3,1.2,0.03,">1 nonsynonymous","T15V G86N D98E R127D",4
"lib2","SARS-CoV-2","ATGCCGAATGGAAGGG",5,66.57,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D68M I88L G152N",3
"lib2","SARS-CoV-2","ATGCCGACACAAACAA",3,105.96,10.83,-0.01,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCGAGCACGGCAC",8,249.91,10.34,-0.49,0.03,2.89,1.12,0,"1 nonsynonymous","G174Q",1
"lib2","SARS-CoV-2","ATGCCGATAGTAACAT",6,53.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27E N64D A89E S139N",4
"lib2","SARS-CoV-2","ATGCCGATATCGAAAT",2,8.17,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A14V G74R D98S S147T G152T",5
"lib2","SARS-CoV-2","ATGCCGATGACACCGC",2,13.72,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15I N107G G155D",3
"lib2","SARS-CoV-2","ATGCCGCAAAGCGCAT",4,99.84,8.57,-2.26,0.06,2.85,1.06,0,">1 nonsynonymous","K87W Y119I H189R",3
"lib2","SARS-CoV-2","ATGCCGCGCACAACAG",7,62.7,8.39,-2.44,0.2,1.5,1.1,0.02,">1 nonsynonymous","F12D Y39L N120V",3
"lib2","SARS-CoV-2","ATGCCGCTACACAACG",9,255.33,8.4,-2.44,0.1,2.56,1.04,0,">1 nonsynonymous","I2T K48S P96S G166K",4
"lib2","SARS-CoV-2","ATGCCGCTAGATACAC",8,73.97,10.69,-0.14,0.05,2.96,1.06,0,">1 nonsynonymous","L57D L122K",2
"lib2","SARS-CoV-2","ATGCCGCTCACCCACA",3,13.42,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","D98H I104Q R127A",3
"lib2","SARS-CoV-2","ATGCCGTAATGATTAC",1,7.6,6.24,-4.6,0.86,3,1.11,0.03,">1 nonsynonymous","K94A W106E S113L P133T",4
"lib2","SARS-CoV-2","ATGCCGTCTGCACTAC",1,33.66,10.05,-0.78,0.09,2.63,1.04,0,">1 nonsynonymous","S29K L95I",2
"lib2","SARS-CoV-2","ATGCCTAAATGACAGA",1,8.53,6,-4.84,2,3,1.07,0,">1 nonsynonymous","T15M A105C C150D Y175I",4
"lib2","SARS-CoV-2","ATGCCTAATAAAAAAA",5,15.16,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Y93A Y119A Q168C",3
"lib2","SARS-CoV-2","ATGCCTACATACCTGT",1,5.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10S S43P N58P L95P",4
"lib2","SARS-CoV-2","ATGCCTAGAAAATTGA",10,103.33,10.05,-0.79,0.05,2.48,1.01,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","ATGCCTAGATAGGACT",7,20.98,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5F Y50Q N92G K128T E186F",5
"lib2","SARS-CoV-2","ATGCCTAGCTAAACTG",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G S129L K199A",3
"lib2","SARS-CoV-2","ATGCCTAGGACCGAGG",3,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52G F70N L95R F99N P177Q",5
"lib2","SARS-CoV-2","ATGCCTATAAAACAAC",8,118.1,10.83,0,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCTATAATAGAAC",5,62.26,10.37,-0.46,0.06,2.89,1.1,0,">1 nonsynonymous","C6F C61S",2
"lib2","SARS-CoV-2","ATGCCTATTAGATAGT",4,129.75,10.66,-0.17,0.03,2.93,1.07,0,">1 nonsynonymous","T85F L187M",2
"lib2","SARS-CoV-2","ATGCCTATTAGCACCA",7,31.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T63R E76I K94N E141N",4
"lib2","SARS-CoV-2","ATGCCTATTGACAAGG",3,71.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41H Q176F F185Q K198N",4
"lib2","SARS-CoV-2","ATGCCTCAAATATCCG",7,17.99,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","I88L D98F N107Q P149Y G155F",5
"lib2","SARS-CoV-2","ATGCCTCCATGTGCCA",1,36.37,10.67,-0.17,0.03,2.98,1.05,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","ATGCCTCCCTGATTCT",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* K87N",2
"lib2","SARS-CoV-2","ATGCCTCGGCAAATTC",1,22.62,10.72,-0.12,0.03,3,1.01,0,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","ATGCCTCTATTACCAA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q D68W T201M",3
"lib2","SARS-CoV-2","ATGCCTGACCCCGCTG",12,14.25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1C C49V C61A G116V A145I T201C",6
"lib2","SARS-CoV-2","ATGCCTGAGTTGAATC",2,120.46,8.54,-2.29,0.08,2.6,1.1,0,">1 nonsynonymous","L125A S139P",2
"lib2","SARS-CoV-2","ATGCCTTAACACACAG",3,7.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82A Y91R Y143G",3
"lib2","SARS-CoV-2","ATGCCTTACAAGAAAT",6,79.39,10.81,-0.02,0.05,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCCTTGGCCCTCGC",8,210.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4C G86D Y178G",3
"lib2","SARS-CoV-2","ATGCCTTTACCTGGCT",7,67.33,8.97,-1.87,0.05,2.98,1.08,0,">1 nonsynonymous","V37N Y119S G155R",3
"lib2","SARS-CoV-2","ATGCGAAAAATGAATG",8,108.05,8.36,-2.48,0.16,1.79,1.06,0.01,">1 nonsynonymous","P7A V32A N58I G116K L125P",5
"lib2","SARS-CoV-2","ATGCGAAACATCCACT",1,41.94,6.22,-4.62,0.49,1.72,1.13,0.02,">1 nonsynonymous","P82A K128N Q176M",3
"lib2","SARS-CoV-2","ATGCGAAAGGCTTATA",1,22.77,10.87,0.03,0.08,2.76,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCGAAATATAAGAT",4,69.42,10.32,-0.51,0.24,1.5,1.03,0.02,">1 nonsynonymous","S53F Q84Y F185I",3
"lib2","SARS-CoV-2","ATGCGAACAGTCACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","ATGCGAATGGACGCAC",2,75.67,9.05,-1.79,0.05,2.92,1.07,0,">1 nonsynonymous","N1E P7A N157S",3
"lib2","SARS-CoV-2","ATGCGAATTAAATAGG",2,12.69,6.65,-4.19,0.12,3,1.02,0,">1 nonsynonymous","K26P P54T",2
"lib2","SARS-CoV-2","ATGCGACAATAATAAC",5,46.58,9.99,-0.85,0.08,2.35,1.06,0,">1 nonsynonymous","W106K A192E",2
"lib2","SARS-CoV-2","ATGCGACAATACCAAA",4,28.48,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V32A I72M I142T",3
"lib2","SARS-CoV-2","ATGCGACACTATCGAT",13,126.03,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T63N S69N G86S",3
"lib2","SARS-CoV-2","ATGCGAGAAAGTCCTT",10,175.48,9.09,-1.75,0.08,2.45,1.08,0,">1 nonsynonymous","F8C S129K T170S",3
"lib2","SARS-CoV-2","ATGCGAGACAACGCAA",7,2.87,NA,NA,NA,NA,NA,NA,"stop","A18L F44K Y93N Y121Q C158K T201*",6
"lib2","SARS-CoV-2","ATGCGAGACCGCTCAA",6,76.17,9.85,-0.99,0.11,2.32,1.01,0.01,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","ATGCGATAAACTGTTA",1,20.55,9.19,-1.64,0.08,2.41,1.04,0,">1 nonsynonymous","G51M G116P Q168R",3
"lib2","SARS-CoV-2","ATGCGATTAACCATTA",6,50.48,10.23,-0.61,0.04,2.84,1.05,0,">1 nonsynonymous","G9L N64M N120A",3
"lib2","SARS-CoV-2","ATGCGATTGAACCAAG",6,105.89,9.7,-1.14,0.07,2.31,1.06,0,">1 nonsynonymous","A18M D90N N120C",3
"lib2","SARS-CoV-2","ATGCGCAAACCCTGAT",7,102.66,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40V L60V G116Y L125C G146T",5
"lib2","SARS-CoV-2","ATGCGCAAGCAAAAAG",12,110.98,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12L C61G V103L S139G",4
"lib2","SARS-CoV-2","ATGCGCAAGCACATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102I T140H",2
"lib2","SARS-CoV-2","ATGCGCACCCCACTTT",7,216.16,10.16,-0.68,0.03,2.81,1.05,0,">1 nonsynonymous","D90L N120F",2
"lib2","SARS-CoV-2","ATGCGCACTACAATCT",4,23.2,10.9,0.06,0.09,2.75,1.05,0,"1 nonsynonymous","R16W",1
"lib2","SARS-CoV-2","ATGCGCACTAGATGTA",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87N P96S P197L",3
"lib2","SARS-CoV-2","ATGCGCATAACGAGGA",8,0.11,NA,NA,NA,NA,NA,NA,"stop","V37P K56L K87*",3
"lib2","SARS-CoV-2","ATGCGCATAAGACACC",1,0,NA,NA,NA,NA,NA,NA,"stop","T46Y I72N K94N E135G E141* T148L C158W T201S",8
"lib2","SARS-CoV-2","ATGCGCATACTTAAAA",4,17.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15M V103A Y165L",3
"lib2","SARS-CoV-2","ATGCGCATCCATGAAA",6,16.75,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y91A V103K",2
"lib2","SARS-CoV-2","ATGCGCATTTTCCAAG",18,210.36,10.32,-0.52,0.04,2.86,1.05,0,">1 nonsynonymous","K128L K132S Q168S",3
"lib2","SARS-CoV-2","ATGCGCCAATGGATCT",8,7.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P96C I104M E135M P191L C195S",5
"lib2","SARS-CoV-2","ATGCGCCACCGATCTA",9,1.95,NA,NA,NA,NA,NA,NA,"stop","Q84H D97* N118K",3
"lib2","SARS-CoV-2","ATGCGCCAGACGATTA",9,68.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K56T P82T V103F K132T",4
"lib2","SARS-CoV-2","ATGCGCCCAGATTATT",11,67.67,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Y50R P177R",2
"lib2","SARS-CoV-2","ATGCGCGAGACCAAGG",9,2.71,NA,NA,NA,NA,NA,NA,"stop","R27E L38K L95R G155W L188*",5
"lib2","SARS-CoV-2","ATGCGCGCTAAGACCC",7,61.82,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K26E K48M Y91K G101R L122Y",5
"lib2","SARS-CoV-2","ATGCGCGGAAACATCA",3,54.55,10.4,-0.44,0.05,2.85,1.1,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","ATGCGCGGCACCTATG",4,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A A42N Y123F R136E P149R F185H",6
"lib2","SARS-CoV-2","ATGCGCGTACATCTCG",1,22.82,8.02,-2.81,0.22,1.5,1.16,0.02,">1 nonsynonymous","R16P D112M K198N",3
"lib2","SARS-CoV-2","ATGCGCTCAACAATAG",3,44.39,10.91,0.08,0.07,2.86,1.16,0,"1 nonsynonymous","N110K",1
"lib2","SARS-CoV-2","ATGCGCTCGACAAACA",3,63.79,9.45,-1.39,0.05,2.11,1.03,0,">1 nonsynonymous","Y21C C61L",2
"lib2","SARS-CoV-2","ATGCGCTGCTATCAAC",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S Q144G",2
"lib2","SARS-CoV-2","ATGCGCTTCAGATAGT",9,202.45,7.55,-3.28,0.19,1.5,1.11,0.01,">1 nonsynonymous","P7L F17T Y119H",3
"lib2","SARS-CoV-2","ATGCGGAAGCTGTGCC",17,6.71,NA,NA,NA,NA,NA,NA,"stop","K26*",1
"lib2","SARS-CoV-2","ATGCGGAAGTCCATTA",7,129.14,9.9,-0.94,0.04,2.89,1.06,0,">1 nonsynonymous","D97N N120I G155D",3
"lib2","SARS-CoV-2","ATGCGGACAACTGCGT",3,66.43,10.77,-0.07,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCGGCATACATGGA",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y Q144R",2
"lib2","SARS-CoV-2","ATGCGGCCACGGCTGA",3,2.79,NA,NA,NA,NA,NA,NA,"stop","R136F F160* G166S S200R",4
"lib2","SARS-CoV-2","ATGCGGCCGAAACAAG",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T G86I T100L Y119C N157D",5
"lib2","SARS-CoV-2","ATGCGGCTAAACATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92D L122R S147Q L162K K198S",5
"lib2","SARS-CoV-2","ATGCGGGAGTTTGTTT",8,193.22,10.89,0.05,0.06,2.88,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGCGGGATATGTGAT",5,136.25,10.85,0.01,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCGGGCATCTAGAG",11,119.94,6.92,-3.91,0.28,1.5,1.15,0.02,">1 nonsynonymous","D112H G166V",2
"lib2","SARS-CoV-2","ATGCGGTAAGATTTGA",8,89.1,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R124T N157L V173T",3
"lib2","SARS-CoV-2","ATGCGGTACTAGGTAC",4,93.75,7.47,-3.36,0.15,2.19,1.17,0.01,">1 nonsynonymous","N58D Y175D",2
"lib2","SARS-CoV-2","ATGCGGTGCTCTAGGA",7,30.69,8.91,-1.93,0.05,2.7,1.1,0,">1 nonsynonymous","R73G R78H N110A",3
"lib2","SARS-CoV-2","ATGCGTAAATGCAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* E135W",2
"lib2","SARS-CoV-2","ATGCGTACATACTCGG",1,41.03,8.76,-2.08,0.11,2.95,1.1,0,"1 nonsynonymous","N157M",1
"lib2","SARS-CoV-2","ATGCGTATACCCTTAA",10,106.99,8.36,-2.48,0.13,1.52,1.19,0.01,">1 nonsynonymous","A14V N118T Y123M",3
"lib2","SARS-CoV-2","ATGCGTATATAGCGAA",3,66.33,10.68,-0.16,0.01,2.98,1.04,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","ATGCGTATCCGAATAT",2,26.81,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A22K K87Y Y93W V173T",4
"lib2","SARS-CoV-2","ATGCGTCTCCTATGAT",6,9.4,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","N1E A14M K26E K48Q R73F",5
"lib2","SARS-CoV-2","ATGCGTCTTATGCACA",6,26.64,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I2T F99E",2
"lib2","SARS-CoV-2","ATGCGTCTTTCTTACT",3,35.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14V R25K L57F I104Q D112V",5
"lib2","SARS-CoV-2","ATGCGTGACCACTCTT",1,2.76,NA,NA,NA,NA,NA,NA,"stop","I88T L122* Y143K",3
"lib2","SARS-CoV-2","ATGCGTGGATTAATAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","N4D S41M G51I L95V N109G Y119V Q176*",7
"lib2","SARS-CoV-2","ATGCGTGGGAATGAAA",2,125.37,9.87,-0.97,0.06,2.78,1.09,0,">1 nonsynonymous","D59R R73T R78G Y178H",4
"lib2","SARS-CoV-2","ATGCGTTGTCTGCATA",1,23.63,10.66,-0.17,0.06,2.82,1.11,0,">1 nonsynonymous","G9V L122I",2
"lib2","SARS-CoV-2","ATGCTAAAATCCGTTG",7,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S45T L95R D98H N130E Y165A",6
"lib2","SARS-CoV-2","ATGCTAAACAAAATCT",7,38.09,8.44,-2.4,0.19,1.5,1.08,0.01,">1 nonsynonymous","N110Q G116S D137H",3
"lib2","SARS-CoV-2","ATGCTAAACAATAGAT",2,17.63,8.39,-2.45,0.27,1.5,1.14,0.03,">1 nonsynonymous","A14V V37G A81M T148I",4
"lib2","SARS-CoV-2","ATGCTAACAGATCTTT",6,106.6,8.73,-2.1,0.08,1.84,1.13,0,">1 nonsynonymous","K26Q S41A D90N D112E",4
"lib2","SARS-CoV-2","ATGCTAACCACACTAT",2,14.39,10.98,0.14,0.1,2.98,1.04,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","ATGCTAAGGACGTCCC",11,94.89,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","G51P L57A Y66D T100S T170R",5
"lib2","SARS-CoV-2","ATGCTAAGTTACAATT",2,34.67,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V32Q Y50I Q79P V173L Q176E",5
"lib2","SARS-CoV-2","ATGCTACAGACCTAAC",5,27.42,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","P7A S41L G146V Y165H",4
"lib2","SARS-CoV-2","ATGCTACCAGCATATC",5,67.79,9,-1.84,0.16,1.71,1.13,0.01,">1 nonsynonymous","F12E N120A",2
"lib2","SARS-CoV-2","ATGCTACCATAGACTT",1,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S A105L",2
"lib2","SARS-CoV-2","ATGCTACCGAACAGCT",4,2.19,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib2","SARS-CoV-2","ATGCTACGTAAATTCA",1,12.71,9.99,-0.85,0.13,2.56,1.07,0.01,">1 nonsynonymous","R27G T55L Y123S",3
"lib2","SARS-CoV-2","ATGCTACTCCAACTCG",3,66.62,11.06,0.22,0.05,2.94,1.07,0,">1 nonsynonymous","D90S L111I N171M T201L",4
"lib2","SARS-CoV-2","ATGCTACTCGTATAAA",8,104.08,8.36,-2.48,0.08,2.55,1.1,0,"1 nonsynonymous","S113W",1
"lib2","SARS-CoV-2","ATGCTACTGGCGTTGC",12,58.14,6.65,-4.19,0.63,1.5,1.3,0.04,">1 nonsynonymous","F99P L122G",2
"lib2","SARS-CoV-2","ATGCTAGAGAAGATCG",3,17.67,6,-4.84,0.97,2.77,1.32,0.01,">1 nonsynonymous","T15F Y21S P54L P82T R136E",5
"lib2","SARS-CoV-2","ATGCTAGATTCAATCG",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K Y35V T55F F62G N107K",5
"lib2","SARS-CoV-2","ATGCTAGCTCTAAGGC",6,55.17,10.63,-0.2,0.04,2.99,1.01,0,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","ATGCTAGGTGATAAAG",4,124.87,10.82,-0.01,0.04,2.93,1.05,0,"1 nonsynonymous","T140E",1
"lib2","SARS-CoV-2","ATGCTAGTCCGAATAA",7,1.9,NA,NA,NA,NA,NA,NA,"stop","N4P V103M C158S K199*",4
"lib2","SARS-CoV-2","ATGCTAGTTTCACACG",3,73.77,10.1,-0.74,0.06,2.54,1.02,0,">1 nonsynonymous","S69W N130M",2
"lib2","SARS-CoV-2","ATGCTATAAATGTTAT",10,120.43,8.75,-2.09,0.08,1.64,1.11,0,">1 nonsynonymous","L5S P54A G86T",3
"lib2","SARS-CoV-2","ATGCTATAATACCAGT",12,137.57,10.75,-0.08,0.04,2.93,1.08,0,">1 nonsynonymous","Y35I N151S",2
"lib2","SARS-CoV-2","ATGCTATAGTTATATA",3,19.76,9.7,-1.13,0.48,1.5,1,0.08,">1 nonsynonymous","T55F L95Q L125P Q168R L187Y",5
"lib2","SARS-CoV-2","ATGCTATGAAACGAGT",8,171.52,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33P N92D D137N Q163E",4
"lib2","SARS-CoV-2","ATGCTATGAGTGAAAC",2,18.15,10.55,-0.29,0.17,2.96,1.01,0.03,">1 nonsynonymous","T55Q D98Y",2
"lib2","SARS-CoV-2","ATGCTATTAACAAATG",11,0.28,NA,NA,NA,NA,NA,NA,"stop","Y93S F99E R136*",3
"lib2","SARS-CoV-2","ATGCTATTCATTAATG",7,53.17,8.96,-1.88,0.14,1.5,1.13,0.01,">1 nonsynonymous","L60S S69R T100N",3
"lib2","SARS-CoV-2","ATGCTATTGAAACTTT",7,52.34,10.35,-0.49,0.04,3,1.01,0,">1 nonsynonymous","A33G D97I Q163R",3
"lib2","SARS-CoV-2","ATGCTCAAGACCTCCG",8,100.23,10.08,-0.76,0.07,2.75,1.06,0,">1 nonsynonymous","T15N S53R Q168S",3
"lib2","SARS-CoV-2","ATGCTCAATACACCCT",4,41.04,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10K G83H L95S G116E Q163L",5
"lib2","SARS-CoV-2","ATGCTCAATCATAATG",3,60.5,10.9,0.07,0.06,2.96,1.02,0,">1 nonsynonymous","S129G S200L",2
"lib2","SARS-CoV-2","ATGCTCAGATGACACA",15,349.78,10.24,-0.59,0.02,2.88,1.05,0,"1 nonsynonymous","P7I",1
"lib2","SARS-CoV-2","ATGCTCAGCGATATCT",1,46.03,9.27,-1.57,0.11,2.88,1.14,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","ATGCTCCAAAATCATA",4,76.78,10.27,-0.57,0.05,2.85,1.03,0,">1 nonsynonymous","F62R G152N",2
"lib2","SARS-CoV-2","ATGCTCCAGGGCAAGA",6,166.59,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F17D V37R C158G",3
"lib2","SARS-CoV-2","ATGCTCCCAATTACAT",16,149.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D59P R73G Y93P Q176M",4
"lib2","SARS-CoV-2","ATGCTCGAGTAAACAA",5,30.78,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S69W R124A T140Y",3
"lib2","SARS-CoV-2","ATGCTCGCAGAAAGGA",3,0.13,NA,NA,NA,NA,NA,NA,"stop","Y121W Y175D S184*",3
"lib2","SARS-CoV-2","ATGCTCGTACACACCT",18,9.59,NA,NA,NA,NA,NA,NA,"stop","N13* Q84H Y121Q T201V",4
"lib2","SARS-CoV-2","ATGCTCGTGAGATTCT",3,36.37,9.84,-0.99,0.08,2.33,1.04,0,">1 nonsynonymous","S41P K48F",2
"lib2","SARS-CoV-2","ATGCTCGTTTGTACAG",6,25.81,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L5F V71I D98Y F134L G152V",5
"lib2","SARS-CoV-2","ATGCTCTAACTCAACT",7,61.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40P G51R P149L L162T V180I",5
"lib2","SARS-CoV-2","ATGCTCTCGCCACTGT",3,86.7,10.43,-0.41,0.05,2.95,1.09,0,">1 nonsynonymous","Y35P K87Y",2
"lib2","SARS-CoV-2","ATGCTCTCGGCGGAGC",5,53.09,10.76,-0.07,0.04,2.98,1.06,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","ATGCTCTCGTCTGGAA",2,7.26,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGCTCTCTACCTTCA",5,17.19,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","C6G V103E",2
"lib2","SARS-CoV-2","ATGCTCTGCACATAAA",3,37.3,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G86D G101A",2
"lib2","SARS-CoV-2","ATGCTCTGCTTAACGA",4,122.48,9.9,-0.94,0.08,2.27,1.03,0,">1 nonsynonymous","A42V I104G",2
"lib2","SARS-CoV-2","ATGCTCTTCGCGTCAA",6,1.57,NA,NA,NA,NA,NA,NA,"stop","I28S N120* Y165H",3
"lib2","SARS-CoV-2","ATGCTCTTGTTTAGTT",3,6.14,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C49S W106V Q144Y",3
"lib2","SARS-CoV-2","ATGCTGAATAGTCCGC",5,66.58,10.75,-0.09,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCTGAATTAACACA",3,17.35,10.77,-0.07,0.08,2.88,1.1,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","ATGCTGACCATGCGTA",5,50.94,8.49,-2.34,0.08,2.44,1.04,0,">1 nonsynonymous","E10F K87D",2
"lib2","SARS-CoV-2","ATGCTGACTAGTCAGC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66G D90N C102I R136K",4
"lib2","SARS-CoV-2","ATGCTGACTCAATAAT",3,26.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27F G51I T140L",3
"lib2","SARS-CoV-2","ATGCTGAGTATAAATA",4,44.13,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K56A N130S Y159T",3
"lib2","SARS-CoV-2","ATGCTGAGTGAGCACT",5,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W N157K F167S",3
"lib2","SARS-CoV-2","ATGCTGATACATGGAA",7,53.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P96C L122V E141S C158M",4
"lib2","SARS-CoV-2","ATGCTGATGTGGTAAC",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L A42L G155Q",3
"lib2","SARS-CoV-2","ATGCTGATTAAGAACA",3,43.2,6.22,-4.62,0.89,1.5,1.31,0.04,">1 nonsynonymous","S45I N107T",2
"lib2","SARS-CoV-2","ATGCTGATTACCTTAA",6,91.67,10.72,-0.12,0.09,2.78,1.11,0,">1 nonsynonymous","G9F D98N",2
"lib2","SARS-CoV-2","ATGCTGCGCACTAATT",4,24.36,6.23,-4.61,1.26,1.5,1.27,0.05,">1 nonsynonymous","F44H L60M Y119N R127Q",4
"lib2","SARS-CoV-2","ATGCTGCTTATAAGAT",2,17.01,7.05,-3.79,0.47,1.5,1.1,0.07,">1 nonsynonymous","N13F A22V V65G D98N N151W",5
"lib2","SARS-CoV-2","ATGCTGGAAACAAACA",3,13.54,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A42S P54R F70M D112V",4
"lib2","SARS-CoV-2","ATGCTGGAATAGATAA",3,61.56,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F12R N107Y D112L P133A F156A T170Y",6
"lib2","SARS-CoV-2","ATGCTGGCACGGACAA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","F47S D112Y Y121* E135W S200Y",5
"lib2","SARS-CoV-2","ATGCTGGCACTTATAA",9,77.99,7.62,-3.22,0.13,1.68,1.09,0.01,">1 nonsynonymous","D98H N107I",2
"lib2","SARS-CoV-2","ATGCTGGCTAATCTGA",8,79.12,10.83,-0.01,0.05,2.88,1.11,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ATGCTGGTAAGATTTA",13,221.11,9.69,-1.15,0.05,2.65,1.02,0,">1 nonsynonymous","V11C V173D",2
"lib2","SARS-CoV-2","ATGCTGTAAACACAAG",4,57.14,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","N118P Y165H A192L",3
"lib2","SARS-CoV-2","ATGCTGTAAGTCTTTC",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N I142Y",2
"lib2","SARS-CoV-2","ATGCTGTACCAATGGT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C E141M P169H G172W E186F",5
"lib2","SARS-CoV-2","ATGCTGTTCCTTTAAG",1,26.62,6.1,-4.73,1.07,1.5,1.2,0.03,">1 nonsynonymous","Y39G Y91T G155E L188I P197S",5
"lib2","SARS-CoV-2","ATGCTTAAAATGTTTA",2,73.14,8.15,-2.69,0.12,2.41,1.08,0,">1 nonsynonymous","T55F D90T L125K",3
"lib2","SARS-CoV-2","ATGCTTAAAGCCAGGA",1,24.73,8.85,-1.99,0.16,2.01,1.05,0.02,">1 nonsynonymous","S19K K48N N151Q",3
"lib2","SARS-CoV-2","ATGCTTAAAGGTTAAA",10,57.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5R V37L D75M I104K Q163Y G174C S184V",7
"lib2","SARS-CoV-2","ATGCTTAACGCGAAAA",4,0.75,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGCTTAATAGAATCT",15,82.11,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","I80S",1
"lib2","SARS-CoV-2","ATGCTTACTAATATTC",2,47.34,6,-4.84,2,2.41,1.28,0.01,">1 nonsynonymous","L60G F70Q",2
"lib2","SARS-CoV-2","ATGCTTAGAATTCGAT",6,45.43,10.83,-0.01,0.07,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGCTTAGGAGACCAA",5,84.91,9.08,-1.75,0.12,1.51,1.09,0.01,"1 nonsynonymous","G86Q",1
"lib2","SARS-CoV-2","ATGCTTCATCATGAAT",3,58,8.38,-2.45,0.12,2.14,1.09,0.01,">1 nonsynonymous","N13M R27L L125T F185I",4
"lib2","SARS-CoV-2","ATGCTTCCAAACACGT",4,50,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19V D98G S113Q Y119V G155V",5
"lib2","SARS-CoV-2","ATGCTTCCCAGTCAGT",11,159.89,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","T15M G51T G116Y R124C P133S",5
"lib2","SARS-CoV-2","ATGCTTCCGCAATGAT",6,46.17,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","D68N T85V A89V I138R N151V",5
"lib2","SARS-CoV-2","ATGCTTCGCATGTCAG",2,5.06,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F62L K94R N107Y L122S",4
"lib2","SARS-CoV-2","ATGCTTGCGGCTAAAT",7,47.57,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9L C49A S139I",3
"lib2","SARS-CoV-2","ATGCTTGGGTAGCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F W106R T140L P149K F156T V173D",6
"lib2","SARS-CoV-2","ATGCTTGTCAAGTTCC",3,46.77,6.65,-4.18,0.19,2.34,1.11,0.01,"1 nonsynonymous","C150Q",1
"lib2","SARS-CoV-2","ATGCTTTAAATTGCCA",6,138.81,10.83,-0.01,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGCTTTATATGAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* S43R A89N P96V A190S",5
"lib2","SARS-CoV-2","ATGCTTTATCAAACAT",2,95.31,10.66,-0.18,0.05,2.91,1.11,0,">1 nonsynonymous","D90M I138L",2
"lib2","SARS-CoV-2","ATGCTTTCCAAGAGTC",7,116.69,8.36,-2.48,0.12,2.56,1.05,0.01,">1 nonsynonymous","L122Y E135C G174I",3
"lib2","SARS-CoV-2","ATGCTTTCCTCAGATA",8,53.27,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R27I C31F T46R G152Y Q168M V173E",6
"lib2","SARS-CoV-2","ATGCTTTGCCAACTAA",2,70.34,9.25,-1.58,0.14,2.59,1.1,0.01,">1 nonsynonymous","K87N S108V",2
"lib2","SARS-CoV-2","ATGCTTTTAAAGTCTA",1,27.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9F T55L Q84L W106G F167D",5
"lib2","SARS-CoV-2","ATGCTTTTCATCTCAC",8,95.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8S D75K G83P I88F",4
"lib2","SARS-CoV-2","ATGCTTTTGAATTACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G K56P P96N",3
"lib2","SARS-CoV-2","ATGGAAAAGCTAGCGA",6,4.88,NA,NA,NA,NA,NA,NA,"stop","T3* Y50Q T63M Q176L",4
"lib2","SARS-CoV-2","ATGGAAAATAGTATGG",3,115.78,10.49,-0.34,0.05,2.88,1.14,0,">1 nonsynonymous","N4V D97N S129R",3
"lib2","SARS-CoV-2","ATGGAAACAGTACATC",1,3.43,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGGAAACATAAAGGA",2,57.64,9.3,-1.54,0.07,2.37,1.04,0,">1 nonsynonymous","G9H N24Y S53F G174M",4
"lib2","SARS-CoV-2","ATGGAAACCAAACTAT",1,17.75,6.09,-4.74,1.58,1.5,1.17,0.03,">1 nonsynonymous","G9V S45P F70R Q168P",4
"lib2","SARS-CoV-2","ATGGAAACCCTACTTC",5,40.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G51S W106D",2
"lib2","SARS-CoV-2","ATGGAAAGATGGAACT",1,9.68,10.86,0.03,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGAAAGGCAACTTC",3,62.68,8.81,-2.03,0.07,2.93,1.07,0,">1 nonsynonymous","N58L G166Q",2
"lib2","SARS-CoV-2","ATGGAAAGGGCGATTG",10,143.56,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A22Y D112R",2
"lib2","SARS-CoV-2","ATGGAAATAATAAGAC",7,95.79,9.99,-0.85,0.06,2.2,1.03,0,">1 nonsynonymous","S45M K56L G83S N120K V153S",5
"lib2","SARS-CoV-2","ATGGAAATCAAGGAAA",1,25.99,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","V37D D90Y L95G F99L",4
"lib2","SARS-CoV-2","ATGGAAATCCAAGAAG",1,5.26,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F12A S53K R73A F185V",4
"lib2","SARS-CoV-2","ATGGAACAACTCACAC",8,183.53,10.41,-0.43,0.03,2.89,1.04,0,">1 nonsynonymous","N13H G152N",2
"lib2","SARS-CoV-2","ATGGAACAAGAAGATT",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S19P T85M N120P C150R",5
"lib2","SARS-CoV-2","ATGGAACACGCAAAAA",6,1.2,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","ATGGAACACGCCAATT",3,2.07,NA,NA,NA,NA,NA,NA,"stop","N151*",1
"lib2","SARS-CoV-2","ATGGAACATAGAACAC",1,95.25,10.45,-0.39,0.05,2.86,1.07,0,">1 nonsynonymous","L5M K56C T85V",3
"lib2","SARS-CoV-2","ATGGAACCGTACAACA",12,85.13,10.69,-0.14,0.04,3,1.02,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","ATGGAACCTTCAACTA",1,38.55,10.76,-0.08,0.06,2.88,1.14,0,">1 nonsynonymous","G83K P149Q",2
"lib2","SARS-CoV-2","ATGGAACGTACATGGA",2,33.48,8.73,-2.11,0.08,2.76,1.13,0,">1 nonsynonymous","G83L Y119L T148L",3
"lib2","SARS-CoV-2","ATGGAACGTTAGACCG",1,0.5,NA,NA,NA,NA,NA,NA,"stop","L38V F167G L187*",3
"lib2","SARS-CoV-2","ATGGAACTATATTGAG",6,131.3,10.16,-0.68,0.06,2.57,1.04,0,">1 nonsynonymous","F8L D97N F167Y",3
"lib2","SARS-CoV-2","ATGGAACTTCCATGTT",3,18.12,10.59,-0.24,0.07,2.88,1.06,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","ATGGAAGAAAACCGTA",1,22.27,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","R25Q F44N G86T L125A",4
"lib2","SARS-CoV-2","ATGGAAGACTTACACT",8,80.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W N92M",2
"lib2","SARS-CoV-2","ATGGAAGAGACCGCCA",7,15.36,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S45V P96I L122F",3
"lib2","SARS-CoV-2","ATGGAAGGAGTGTAAT",4,77.1,10.83,-0.01,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGAAGTAATCACGG",1,9.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I88N K94C W106K S113K",4
"lib2","SARS-CoV-2","ATGGAAGTGTCAAACA",11,212.13,9.85,-0.99,0.03,2.81,1.09,0,">1 nonsynonymous","V32H D97N N120A E154C",4
"lib2","SARS-CoV-2","ATGGAATAAAATGACA",4,98.76,10.6,-0.23,0.01,2.96,1.02,0,">1 nonsynonymous","N4A G116T",2
"lib2","SARS-CoV-2","ATGGAATAAAGTGATA",4,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98F T201L",2
"lib2","SARS-CoV-2","ATGGAATAACATCTAG",3,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62P T201A",2
"lib2","SARS-CoV-2","ATGGAATCACAAAAAT",5,99.91,9.72,-1.11,0.06,2.54,1.06,0,">1 nonsynonymous","N107P F134N",2
"lib2","SARS-CoV-2","ATGGAATGATCATTCC",5,183.6,10.89,0.05,0.05,2.94,1.07,0,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","ATGGAATGGTGTACAA",1,18.46,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C61P Y119L C150S C158A",4
"lib2","SARS-CoV-2","ATGGAATGTAAAGAAA",3,53.29,10.54,-0.3,0.05,2.92,1.07,0,"1 nonsynonymous","N58I",1
"lib2","SARS-CoV-2","ATGGAATGTATACGTA",13,62.87,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V11G V103G",2
"lib2","SARS-CoV-2","ATGGACAAAGATTAAA",2,17.11,10.08,-0.76,0.15,2.69,1,0.01,">1 nonsynonymous","Y39W S45I",2
"lib2","SARS-CoV-2","ATGGACACCACGATAT",5,70.57,10.51,-0.33,0.04,2.89,1.1,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","ATGGACACCTAGACCT",6,69.1,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G86N Y121L P133Q",3
"lib2","SARS-CoV-2","ATGGACACGGTATTAA",1,38.43,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A105S P149K G172Y K199N",4
"lib2","SARS-CoV-2","ATGGACACTAGCGACA",3,37.36,6,-4.84,0.83,1.5,1.14,0.01,">1 nonsynonymous","I2S A14F N110K P161T",4
"lib2","SARS-CoV-2","ATGGACACTGCACCTG",2,60.66,10.4,-0.43,0.05,2.86,1.05,0,">1 nonsynonymous","A42R I104S",2
"lib2","SARS-CoV-2","ATGGACACTTATAGAA",18,6.16,NA,NA,NA,NA,NA,NA,"stop","N58P K199*",2
"lib2","SARS-CoV-2","ATGGACAGGGACAGTA",1,7.77,8.49,-2.34,0.31,1.5,1.01,0.03,">1 nonsynonymous","D68E Y178F",2
"lib2","SARS-CoV-2","ATGGACCAATGTTTTC",22,150.84,9.52,-1.31,0.09,1.93,1.08,0,">1 nonsynonymous","A14W P149T",2
"lib2","SARS-CoV-2","ATGGACCAGTTTCATG",5,23.97,10.03,-0.8,0.12,2.66,1.02,0.01,">1 nonsynonymous","S53T R136N",2
"lib2","SARS-CoV-2","ATGGACCATCACTATT",2,24.58,8.57,-2.27,0.16,1.5,1.11,0.01,">1 nonsynonymous","N4T N40T K94N T148R T170F",5
"lib2","SARS-CoV-2","ATGGACCCTTTTGCCA",9,69.27,6,-4.84,1.43,1.5,1.23,0.02,">1 nonsynonymous","R25K L60P Q168A",3
"lib2","SARS-CoV-2","ATGGACCTCGTCTTAA",19,66.59,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","P82F D97I K199C",3
"lib2","SARS-CoV-2","ATGGACGTAGACAATA",3,5.58,NA,NA,NA,NA,NA,NA,"stop","S45K F99* F156N V181P",4
"lib2","SARS-CoV-2","ATGGACTAAAAGTGTC",4,0,NA,NA,NA,NA,NA,NA,"stop","D34* W106G",2
"lib2","SARS-CoV-2","ATGGACTAAGATAAGC",8,150.53,9.73,-1.1,0.05,1.97,1.07,0,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","ATGGACTAATGTACAT",20,354.7,10.83,-0.01,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGACTACAAAGTTC",4,25.8,6,-4.84,2,1.5,1.39,0.04,">1 nonsynonymous","V11Y P82S",2
"lib2","SARS-CoV-2","ATGGACTACATTCTCC",5,19.61,7.17,-3.67,0.46,1.5,1.08,0.07,">1 nonsynonymous","L57V R73V T100I E154K",4
"lib2","SARS-CoV-2","ATGGACTATAAACGTA",2,25.27,10.79,-0.04,0.09,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGACTATACGCCGA",2,5.95,10.02,-0.82,0.32,2.35,1.01,0.03,">1 nonsynonymous","A105G G116F",2
"lib2","SARS-CoV-2","ATGGACTATGTAATAA",13,89.35,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K94S A105N Y123S Y159M S184T",5
"lib2","SARS-CoV-2","ATGGACTGATTAAGAA",3,26.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14G K94H Y119Q F134V",4
"lib2","SARS-CoV-2","ATGGACTGTGTGCCGT",2,62.59,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N30L T85D D90P",3
"lib2","SARS-CoV-2","ATGGAGAAACCTTTTT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5K Y39S D68R Y91A F156* V182G",6
"lib2","SARS-CoV-2","ATGGAGAAGGATCAAT",2,18.5,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","I2H N120V G146R Y178D",4
"lib2","SARS-CoV-2","ATGGAGATAAGCAGGA",10,112.44,6.09,-4.74,0.78,1.5,1.24,0.02,">1 nonsynonymous","L38C G86W V103I L122E",4
"lib2","SARS-CoV-2","ATGGAGATGGTAACAT",1,21.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S41L Y50L T63Y D97G F134M G172S",6
"lib2","SARS-CoV-2","ATGGAGCAAAAACGAA",4,58.94,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S41T A67C I88D V180F",4
"lib2","SARS-CoV-2","ATGGAGCATTAAAAAT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53G Y119V G146C H189L",4
"lib2","SARS-CoV-2","ATGGAGCCAGAGTATG",1,7.63,8.18,-2.66,0.2,1.5,1,0.02,">1 nonsynonymous","A89L V115P",2
"lib2","SARS-CoV-2","ATGGAGCCTTAGTACG",5,174.97,10.53,-0.31,0.04,2.91,1.08,0,">1 nonsynonymous","V32F S41L",2
"lib2","SARS-CoV-2","ATGGAGCGAAGACCAC",3,72.13,9.82,-1.02,0.11,2.07,1.06,0.01,">1 nonsynonymous","G9L G51A",2
"lib2","SARS-CoV-2","ATGGAGCGAAGTGCGC",4,100.05,10.64,-0.19,0.03,2.91,1.1,0,">1 nonsynonymous","C61S G152S",2
"lib2","SARS-CoV-2","ATGGAGGAAATACGGA",2,34.71,9.85,-0.99,0.13,2.19,1.01,0.01,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","ATGGAGGAATGGGGTA",10,92.65,8.97,-1.86,0.18,1.5,1,0.02,">1 nonsynonymous","T85E D97Y R136F",3
"lib2","SARS-CoV-2","ATGGAGGACTCTTTGG",5,18.78,10.9,0.06,0.05,2.94,1.1,0,">1 nonsynonymous","T55A N120E L187R",3
"lib2","SARS-CoV-2","ATGGAGGATCATTATC",5,114.32,10.67,-0.17,0.04,2.91,1.08,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","ATGGAGGATCCACAAA",8,97.07,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S29G G51H C102L E135R",4
"lib2","SARS-CoV-2","ATGGAGGGAACTTGCA",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Q N130L",2
"lib2","SARS-CoV-2","ATGGAGGGGGACGACA",9,132.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D90C Y165G",2
"lib2","SARS-CoV-2","ATGGAGTAAGATCGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N R25K A42F D68Q",4
"lib2","SARS-CoV-2","ATGGAGTCCTCAGCAC",3,30.56,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y93H F167S",2
"lib2","SARS-CoV-2","ATGGATAAAAACGCGC",8,124.22,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N151I F167K",2
"lib2","SARS-CoV-2","ATGGATAACCGACTAA",10,82.12,10.82,-0.02,0.06,2.89,1.13,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","ATGGATAAGAAGTCGC",7,99.82,10.49,-0.35,0.04,2.89,1.08,0,"1 nonsynonymous","A33I",1
"lib2","SARS-CoV-2","ATGGATAAGTGTAATA",3,27.66,6,-4.84,2,3,1.1,0,">1 nonsynonymous","P7T N92K",2
"lib2","SARS-CoV-2","ATGGATAAGTGTCGAA",4,42.19,8.78,-2.05,0.06,2.76,1.05,0,">1 nonsynonymous","A33K Y119F",2
"lib2","SARS-CoV-2","ATGGATACCATCCGAG",3,15.98,9.87,-0.97,0.38,1.5,1,0.05,">1 nonsynonymous","F8Y R27L G51T I104Y",4
"lib2","SARS-CoV-2","ATGGATACGGCTTTAA",2,27.02,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","W23R F99L V173Q",3
"lib2","SARS-CoV-2","ATGGATACTTTTCAAT",5,84.96,9.75,-1.08,0.05,2.5,1.09,0,">1 nonsynonymous","D98G N110G G116T N151Y",4
"lib2","SARS-CoV-2","ATGGATAGCAACTCTA",6,10.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15N C49M",2
"lib2","SARS-CoV-2","ATGGATAGTCTTCTAA",1,9.63,9.2,-1.64,0.11,2.79,1.19,0.01,">1 nonsynonymous","K128S Q168L",2
"lib2","SARS-CoV-2","ATGGATAGTGGCAACT",1,16.87,9.16,-1.68,0.11,2.68,1.01,0.01,"1 nonsynonymous","G146C",1
"lib2","SARS-CoV-2","ATGGATATAAAATTAT",8,106.25,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","R27M S139T F167G",3
"lib2","SARS-CoV-2","ATGGATATCGAATGAT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","N4* T140D",2
"lib2","SARS-CoV-2","ATGGATCACAACTTTC",1,25.46,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","P7T G86W N107V",3
"lib2","SARS-CoV-2","ATGGATCAGTAATACG",2,14.47,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3K A14L N92F",3
"lib2","SARS-CoV-2","ATGGATCCCAGTTGGA",3,0.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGGATGAACGTGTAT",11,5.83,NA,NA,NA,NA,NA,NA,"stop","A89H C150* H189N",3
"lib2","SARS-CoV-2","ATGGATGATTCTCACA",8,0.78,NA,NA,NA,NA,NA,NA,"stop","A14R L60*",2
"lib2","SARS-CoV-2","ATGGATGGGGCATGTC",4,68.35,9.22,-1.62,0.04,2.86,1.1,0,">1 nonsynonymous","P7S K56H G155M G166S T201C",5
"lib2","SARS-CoV-2","ATGGATGTACAAGCAT",10,143.87,10.77,-0.07,0.05,2.92,1.09,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","ATGGATTACCCCAAAT",2,48.28,10.72,-0.12,0.07,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGATTCGAATAGAG",11,8.64,NA,NA,NA,NA,NA,NA,"stop","C102M G146* G174S",3
"lib2","SARS-CoV-2","ATGGATTCGGGTCTTG",10,71.79,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86R F99Y",2
"lib2","SARS-CoV-2","ATGGATTCGTAATAAC",13,128.77,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A89H Y143E",2
"lib2","SARS-CoV-2","ATGGATTCGTCATGCT",2,57.44,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","R25V S53D I88F D97R S139T E141D L188K",7
"lib2","SARS-CoV-2","ATGGATTGCTCCAGGC",1,15.68,9.26,-1.58,0.12,3,1.01,0.01,"1 nonsynonymous","Y119Q",1
"lib2","SARS-CoV-2","ATGGATTGTACTTCTT",7,1.31,NA,NA,NA,NA,NA,NA,"stop","L38* A105T C150F",3
"lib2","SARS-CoV-2","ATGGATTTATCCCCAA",20,3.32,NA,NA,NA,NA,NA,NA,"stop","C61S L122* P161Y",3
"lib2","SARS-CoV-2","ATGGATTTGAGTTATC",1,5.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R F44P C49S K87H F160Y",5
"lib2","SARS-CoV-2","ATGGCAAAAACAAATT",6,76.48,10.82,-0.02,0.04,2.92,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGCAAAACTACGCG",7,297.11,10.85,0.01,0.04,2.91,1.07,0,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","ATGGCAAAAGCATAAA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","C6I D98* P149L",3
"lib2","SARS-CoV-2","ATGGCAAAAGTTATCT",5,19.26,10.08,-0.75,0.05,3,1.01,0,">1 nonsynonymous","G9C V37H",2
"lib2","SARS-CoV-2","ATGGCAAACAACCACA",12,222.08,10.65,-0.18,0.02,2.94,1.06,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","ATGGCAAACACGAGCC",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24V S43P G152I",3
"lib2","SARS-CoV-2","ATGGCAAATAATATAC",10,85.65,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N64L N92E I104Y F134L G172P",5
"lib2","SARS-CoV-2","ATGGCAAATTAACCCA",3,14.72,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K48G S69R F99H V115L L183V",5
"lib2","SARS-CoV-2","ATGGCAAGAAGCGGCA",6,7.85,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","N4P L57T T63N D98S N107L K114A I138L",7
"lib2","SARS-CoV-2","ATGGCAATGGTGATAT",2,1.24,NA,NA,NA,NA,NA,NA,"stop","Y50L G116F G146* E154V",4
"lib2","SARS-CoV-2","ATGGCACAAAGATACG",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W S36M A89V Y91A G101R N171F V181S",7
"lib2","SARS-CoV-2","ATGGCACAATCGTAAA",1,13.43,6,-4.84,2,3,1.02,0,">1 nonsynonymous","T15P I142V C150K S184Q",4
"lib2","SARS-CoV-2","ATGGCACATATAGATA",2,30.12,10.7,-0.13,0.11,2.71,1.26,0,">1 nonsynonymous","S43F P54L",2
"lib2","SARS-CoV-2","ATGGCACCAATATACC",8,110.4,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35T D68G P82W G146V",4
"lib2","SARS-CoV-2","ATGGCACCGATACTTA",8,36.24,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5T Y50P P149M",3
"lib2","SARS-CoV-2","ATGGCACCGGGGGATA",3,136.3,9.86,-0.98,0.03,2.9,1.06,0,">1 nonsynonymous","L95V S139G Q168M",3
"lib2","SARS-CoV-2","ATGGCACCTTTCACAA",8,144.95,10.29,-0.55,0.02,2.91,1.05,0,">1 nonsynonymous","K87Y F134T",2
"lib2","SARS-CoV-2","ATGGCACGCACTATAA",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N A89E",2
"lib2","SARS-CoV-2","ATGGCACTCACACATA",1,33.45,10.04,-0.79,0.17,2.23,1.08,0.01,">1 nonsynonymous","C61F T100F L162C N171M",4
"lib2","SARS-CoV-2","ATGGCAGACTACATAT",17,380.01,10.56,-0.27,0.02,2.93,1.06,0,">1 nonsynonymous","I138S F160S",2
"lib2","SARS-CoV-2","ATGGCAGAGATACTTG",3,12,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","T46R G172L V180L",3
"lib2","SARS-CoV-2","ATGGCAGCACCAACCT",12,10.6,NA,NA,NA,NA,NA,NA,"stop","N30*",1
"lib2","SARS-CoV-2","ATGGCAGGTCAAATAC",1,0.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133C",1
"lib2","SARS-CoV-2","ATGGCATATAGCGAAA",2,3.54,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib2","SARS-CoV-2","ATGGCATCAGCGTTAA",10,177.17,10.72,-0.11,0.02,2.94,1.06,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","ATGGCATCCGTTAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7R R27* Y66S T100S N109P",5
"lib2","SARS-CoV-2","ATGGCATGTGATAACC",2,19.67,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I104P F167A",2
"lib2","SARS-CoV-2","ATGGCATTTTGGGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Q P133S",2
"lib2","SARS-CoV-2","ATGGCCACACCTGAAT",2,107.89,9.16,-1.68,0.05,2.89,1.11,0,">1 nonsynonymous","I2D Q176A",2
"lib2","SARS-CoV-2","ATGGCCAGAAAACGGC",2,28.45,10.1,-0.74,0.12,2.6,1.03,0.01,">1 nonsynonymous","S45K T55C T148R",3
"lib2","SARS-CoV-2","ATGGCCAGAACAACCC",1,52.41,10.75,-0.09,0.07,2.99,1.04,0,"1 nonsynonymous","R73K",1
"lib2","SARS-CoV-2","ATGGCCAGCAAAGAAT",2,62.71,10.78,-0.05,0.07,2.87,1.12,0,">1 nonsynonymous","I2N V37L",2
"lib2","SARS-CoV-2","ATGGCCAGTTGAACTG",7,44.05,6.08,-4.76,1.1,1.5,1.21,0.02,">1 nonsynonymous","R27G L38W T100E",3
"lib2","SARS-CoV-2","ATGGCCATAACGTATT",2,58.17,10.41,-0.43,0.04,2.84,1.15,0,">1 nonsynonymous","L131M C195G",2
"lib2","SARS-CoV-2","ATGGCCCCAGATGGCG",8,2.57,NA,NA,NA,NA,NA,NA,"stop","C6Y V37R R73F V103L P133A F160S K199*",7
"lib2","SARS-CoV-2","ATGGCCCTCATTGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37L F70Y G86* E154K",4
"lib2","SARS-CoV-2","ATGGCCGCCCCCAGAT",3,29.74,8.73,-2.11,0.17,1.5,1.09,0.01,"1 nonsynonymous","L183Y",1
"lib2","SARS-CoV-2","ATGGCCGCTGGATAAA",7,120.89,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L60I I88T L122P Q168E",4
"lib2","SARS-CoV-2","ATGGCGAAAAAACGGT",1,52.73,10.13,-0.71,0.05,2.94,1,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","ATGGCGAAAAATTTAT",6,116.25,10.17,-0.67,0.05,2.67,1.08,0,">1 nonsynonymous","T55F T100A P133A",3
"lib2","SARS-CoV-2","ATGGCGAAAGAACACC",5,75.37,10.76,-0.08,0.05,2.94,1.04,0,"1 nonsynonymous","R27C",1
"lib2","SARS-CoV-2","ATGGCGAAATTGTCCG",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D A105R S184T",3
"lib2","SARS-CoV-2","ATGGCGAAGCACCTTA",1,44.83,10.27,-0.56,0.06,2.92,1.1,0,">1 nonsynonymous","K56A F156L",2
"lib2","SARS-CoV-2","ATGGCGATCGAATCCT",1,16.87,10.74,-0.09,0.08,2.92,1.07,0,">1 nonsynonymous","T100V S184N",2
"lib2","SARS-CoV-2","ATGGCGATGATTACGT",8,1.87,NA,NA,NA,NA,NA,NA,"stop","I2R F44Y G86R E154*",4
"lib2","SARS-CoV-2","ATGGCGCGGACCGCTT",1,84.03,10.63,-0.2,0.03,2.94,1.03,0,">1 nonsynonymous","L5G A42I",2
"lib2","SARS-CoV-2","ATGGCGGACATAACTA",2,0.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","ATGGCGGATGCCCATA",1,15.45,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","F44V C49V D90I S147Y",4
"lib2","SARS-CoV-2","ATGGCTAAACATTGTA",6,135.69,10.88,0.04,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGCTAAATTGAGAA",4,43.87,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8A N13K N40L G152A Q176K",5
"lib2","SARS-CoV-2","ATGGCTAATTAACTAA",8,108.8,9.9,-0.94,0.06,2.09,1.04,0,">1 nonsynonymous","T3F V37L F62K G83L",4
"lib2","SARS-CoV-2","ATGGCTATATTTTAGG",1,8.66,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","T3A A145T C150I",3
"lib2","SARS-CoV-2","ATGGCTATGGGCGCTG",2,18.37,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","Y91S T100P",2
"lib2","SARS-CoV-2","ATGGCTCAAAATGTAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","ATGGCTCAATATTTAA",10,21.34,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3K Y50T T85Y D98T",4
"lib2","SARS-CoV-2","ATGGCTCATAACCTGT",3,497.07,10.86,0.02,0.04,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGGCTCCACCGATGT",2,61.48,8.17,-2.67,0.15,1.78,1.07,0.01,">1 nonsynonymous","S36Q Y91R Y143V",3
"lib2","SARS-CoV-2","ATGGCTCTAGAATAAG",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K N64L K87P C102I C158A Q176T K199M",7
"lib2","SARS-CoV-2","ATGGCTGACTTATATG",1,8.83,9.34,-1.5,0.38,1.87,1.09,0.04,"1 nonsynonymous","R25A",1
"lib2","SARS-CoV-2","ATGGCTGATATGTTAA",5,49.69,10.16,-0.67,0.03,2.96,1.07,0,">1 nonsynonymous","Y35F Q168G",2
"lib2","SARS-CoV-2","ATGGCTGCATCACTCA",9,56.34,6.59,-4.24,0.35,1.5,1.11,0.01,">1 nonsynonymous","V20S V37L D98N W106T A190I",5
"lib2","SARS-CoV-2","ATGGCTGGCGTCTATT",5,43.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V103L P149T N157Y",3
"lib2","SARS-CoV-2","ATGGCTTCATAGCTTA",2,37.52,10.07,-0.77,0.06,2.91,1.01,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","ATGGCTTCCATAACGT",3,33.34,6,-4.84,1.51,1.5,1.07,0,">1 nonsynonymous","D97S N107L Y165K",3
"lib2","SARS-CoV-2","ATGGCTTGCCACTATA",8,78.98,6.68,-4.16,0.45,1.5,1.2,0.03,">1 nonsynonymous","V52Y D90I D98G T148A T201W",5
"lib2","SARS-CoV-2","ATGGCTTGCGGATTGG",4,31.2,10.69,-0.15,0.04,2.98,1,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","ATGGCTTTCCGAAGGT",5,19.15,8.91,-1.93,0.1,2.3,1.01,0.01,">1 nonsynonymous","G9V T15A F62G Y121L",4
"lib2","SARS-CoV-2","ATGGGAAAATTCATGA",4,0.04,NA,NA,NA,NA,NA,NA,"stop","V77* D112N",2
"lib2","SARS-CoV-2","ATGGGAACACACCACA",3,94.08,9.73,-1.11,0.06,1.98,1.02,0,">1 nonsynonymous","G51F K132T",2
"lib2","SARS-CoV-2","ATGGGAAGCCACAACT",12,199.26,9.94,-0.9,0.05,2.45,1.01,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","ATGGGAAGTTTTGTTG",13,14.14,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13T V103Y Y121F N157T",4
"lib2","SARS-CoV-2","ATGGGAATCCTCAGAC",1,46.77,6,-4.84,1.71,1.5,1.11,0.01,">1 nonsynonymous","I2V G86T F167G",3
"lib2","SARS-CoV-2","ATGGGAATGTATTTTC",3,24.43,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27L Y50V L60T G117M L125N E135Q L187F",7
"lib2","SARS-CoV-2","ATGGGAATTGATACCA",4,60.29,10.38,-0.45,0.04,2.86,1.04,0,">1 nonsynonymous","P133S P149Q",2
"lib2","SARS-CoV-2","ATGGGACCACTGCCTA",4,30.93,10.77,-0.07,0.07,2.95,1.07,0,">1 nonsynonymous","A22R K198T",2
"lib2","SARS-CoV-2","ATGGGACCTGTAAGAT",6,83.41,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S19T V37G G86T L122A",4
"lib2","SARS-CoV-2","ATGGGACTAAAGTTTA",1,6.79,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","W23R S36I C49T D59C L95A N120T",6
"lib2","SARS-CoV-2","ATGGGACTAACTACTA",5,43.68,6.52,-4.32,0.22,1.5,1.07,0,">1 nonsynonymous","F12R G116R F167Y S200D",4
"lib2","SARS-CoV-2","ATGGGACTGTACATAC",4,26.87,6.86,-3.97,0.47,1.86,1.25,0.04,">1 nonsynonymous","T3R I88K N157K",3
"lib2","SARS-CoV-2","ATGGGACTTGTACACG",14,66.66,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D59I R78K L95P C102N",4
"lib2","SARS-CoV-2","ATGGGAGACCCCAGCT",4,81.37,8.02,-2.82,0.19,1.5,1.07,0.02,">1 nonsynonymous","Y35A T55G V173W Q176K",4
"lib2","SARS-CoV-2","ATGGGAGGCTAAGGAT",2,51.65,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","R25S V37R S43Y S53P D98E D112L N120F G146L",8
"lib2","SARS-CoV-2","ATGGGATAGTAGAAAT",4,69.77,10.85,0.02,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGGATATTAGCCAC",1,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68N",1
"lib2","SARS-CoV-2","ATGGGATGACACATAT",1,9.5,9.26,-1.57,0.09,2.86,1.01,0.01,">1 nonsynonymous","P96S Y119S",2
"lib2","SARS-CoV-2","ATGGGCAAAACATTGC",4,0.25,NA,NA,NA,NA,NA,NA,"stop","R25M D34* S113R",3
"lib2","SARS-CoV-2","ATGGGCAAGAATCACA",4,14.16,10.3,-0.53,0.1,2.99,1.05,0.01,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","ATGGGCATTCACTCGT",3,12.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A105P K128S E141P",3
"lib2","SARS-CoV-2","ATGGGCCAAAGCATGC",5,83.6,10.51,-0.33,0.04,2.94,1.07,0,">1 nonsynonymous","S41K C61S",2
"lib2","SARS-CoV-2","ATGGGCCCGACTACAC",7,37.87,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V20I V71G T100P C102Y N107R R136I",6
"lib2","SARS-CoV-2","ATGGGCCGAATCCACA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","S19* F44I I88Y Y119I",4
"lib2","SARS-CoV-2","ATGGGCCTCTATATGA",15,2.31,NA,NA,NA,NA,NA,NA,"stop","Y50P R127H S129C T148*",4
"lib2","SARS-CoV-2","ATGGGCCTGAAACATT",2,25.93,9.46,-1.38,0.14,1.77,1.09,0.01,">1 nonsynonymous","Y35N T100L Y123V",3
"lib2","SARS-CoV-2","ATGGGCGACTTATAAA",11,143.78,10.87,0.03,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGGCGTGACAACAT",9,67.66,10.79,-0.05,0.06,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGGCTACACATCGT",8,159.27,10.39,-0.45,0.03,2.85,1.02,0,">1 nonsynonymous","T3A Y175W L183V",3
"lib2","SARS-CoV-2","ATGGGCTCGTAGCATA",23,219.46,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D97R S147Y G152K Q176W",4
"lib2","SARS-CoV-2","ATGGGCTTATACAGAC",2,51.95,9.13,-1.71,0.08,2.28,1.17,0,">1 nonsynonymous","T3R N13T T170H",3
"lib2","SARS-CoV-2","ATGGGCTTCGTGCGTT",3,60.25,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","D68A T148D Y178K",3
"lib2","SARS-CoV-2","ATGGGCTTTAAAAGAT",1,36.93,8.67,-2.16,0.07,2.83,1.1,0,">1 nonsynonymous","R16V S113K",2
"lib2","SARS-CoV-2","ATGGGGAAAACTGTCA",5,0.05,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGGGGAACAGACCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2M P7K A14I V37Y D59* N151Q",6
"lib2","SARS-CoV-2","ATGGGGACTATTAATG",9,105.9,10.54,-0.3,0.03,2.96,1.05,0,">1 nonsynonymous","K56R S139C",2
"lib2","SARS-CoV-2","ATGGGGACTTTATAGG",2,56.75,8.8,-2.03,0.25,1.55,1.12,0.02,">1 nonsynonymous","E10V I80M",2
"lib2","SARS-CoV-2","ATGGGGAGGACAGTGA",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149V S184C T201K",3
"lib2","SARS-CoV-2","ATGGGGATGACATTCA",2,19.37,10.87,0.03,0.06,2.97,1.05,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","ATGGGGATTCGGTACA",11,48.35,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y50N T170V",2
"lib2","SARS-CoV-2","ATGGGGCAAGTGGCGA",11,1.97,NA,NA,NA,NA,NA,NA,"stop","D34* S43Y T63R",3
"lib2","SARS-CoV-2","ATGGGGCACCAAACAA",7,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139Q Q176W",2
"lib2","SARS-CoV-2","ATGGGGCTATTAACTA",11,124.92,10.85,0.01,0.03,2.95,1.06,0,">1 nonsynonymous","S129T P149S",2
"lib2","SARS-CoV-2","ATGGGGGACGCTGCCA",3,29.45,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","R27F A67D G146T",3
"lib2","SARS-CoV-2","ATGGGGTTTAGATTCA",8,58.26,6.14,-4.69,1.4,1.5,1.19,0.04,">1 nonsynonymous","A33L A42I A81I Y119L",4
"lib2","SARS-CoV-2","ATGGGTAAGGCACGTG",7,23.82,7.68,-3.15,0.38,1.5,1.13,0.05,">1 nonsynonymous","A14L I104G",2
"lib2","SARS-CoV-2","ATGGGTACTGTGCCTT",1,85.27,10.34,-0.5,0.03,2.96,1.02,0,">1 nonsynonymous","V11L C61K Y123H",3
"lib2","SARS-CoV-2","ATGGGTATACAATATG",3,0.45,NA,NA,NA,NA,NA,NA,"stop","V77K V103T E141* P197T",4
"lib2","SARS-CoV-2","ATGGGTATACTACTTT",8,176.59,10.53,-0.3,0.03,2.9,1.07,0,">1 nonsynonymous","C61L E141G",2
"lib2","SARS-CoV-2","ATGGGTATAGGATACT",5,100.02,10.39,-0.45,0.07,2.93,1.06,0,">1 nonsynonymous","V77M T85S",2
"lib2","SARS-CoV-2","ATGGGTATATTTATTT",1,48.61,6,-4.84,1.65,3,1.13,0,">1 nonsynonymous","N40M K114V P161W",3
"lib2","SARS-CoV-2","ATGGGTATCTCCAGCG",2,41.06,10.25,-0.59,0.06,2.97,1.01,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","ATGGGTCATGAAACAC",4,24.86,6,-4.84,1.5,1.5,1.08,0.01,">1 nonsynonymous","C6A Y50F Y123G I138R",4
"lib2","SARS-CoV-2","ATGGGTCCATTACCAC",1,10.88,6,-4.84,2,3,1.31,0.01,"1 nonsynonymous","F70S",1
"lib2","SARS-CoV-2","ATGGGTCCTAGTAAGT",1,6.71,10.17,-0.67,0.09,2.08,1,0,"1 nonsynonymous","F17S",1
"lib2","SARS-CoV-2","ATGGGTCGCATCGTTG",5,29.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T140L C158W",2
"lib2","SARS-CoV-2","ATGGGTGAATAGTTAA",2,0.66,NA,NA,NA,NA,NA,NA,"stop","R25E L95* N151S",3
"lib2","SARS-CoV-2","ATGGGTGACGAAGCCC",5,42.41,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","N24L V77L L95T T100K",4
"lib2","SARS-CoV-2","ATGGGTGGAGCTGATA",2,34.09,9.64,-1.2,0.04,2.94,1.01,0,"1 nonsynonymous","F156C",1
"lib2","SARS-CoV-2","ATGGGTGGGCCGACAT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","Y50H C150N Q176*",3
"lib2","SARS-CoV-2","ATGGGTGGTTAAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4L V37Q F70L D75R Y119L Y175*",6
"lib2","SARS-CoV-2","ATGGGTGTTTAGGAGC",3,53.49,10.78,-0.05,0.04,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGGGTTAAAAGTTAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L K48N N107W Y119H P149I Q176Y K199T",7
"lib2","SARS-CoV-2","ATGGGTTCCCCTGCTA",1,19.49,10.56,-0.28,0.1,2.92,1.11,0,">1 nonsynonymous","S36L G83K V153F",3
"lib2","SARS-CoV-2","ATGGGTTTTGCGTATA",4,15.09,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15N I80E T100L Y119A",4
"lib2","SARS-CoV-2","ATGGTAAAATACGAGT",3,35.47,9.74,-1.09,0.05,2.92,1.05,0,">1 nonsynonymous","F160W T170R P197A",3
"lib2","SARS-CoV-2","ATGGTAAACCCATATA",2,41.93,10.34,-0.49,0.05,2.96,1.06,0,">1 nonsynonymous","Q144D F160S",2
"lib2","SARS-CoV-2","ATGGTAAAGCAGTCTG",2,20.43,6.19,-4.65,1.01,1.5,1.16,0.04,">1 nonsynonymous","A105T P161L",2
"lib2","SARS-CoV-2","ATGGTAAAGTAGTACA",9,37.66,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","I88K G174S",2
"lib2","SARS-CoV-2","ATGGTAAATGGCTATC",4,0.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144H",1
"lib2","SARS-CoV-2","ATGGTAAATTTAAGAG",2,10.68,7.47,-3.36,0.31,1.87,1.07,0.05,">1 nonsynonymous","D90I W106Y",2
"lib2","SARS-CoV-2","ATGGTAAATTTGATAT",2,17.43,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","W23L S41M F62P G101T",4
"lib2","SARS-CoV-2","ATGGTAACACGTACTA",2,15.7,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T85N D90V N120R L162S P197I",5
"lib2","SARS-CoV-2","ATGGTAACCAGCCCTT",1,118.01,10.21,-0.62,0.04,2.89,1.05,0,">1 nonsynonymous","P7S T85K D90K",3
"lib2","SARS-CoV-2","ATGGTAACTAAATATA",2,35.78,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V77N",1
"lib2","SARS-CoV-2","ATGGTAAGAAAAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","V71* I88Q",2
"lib2","SARS-CoV-2","ATGGTAATCAAGCCAC",8,0.16,NA,NA,NA,NA,NA,NA,"stop","N92R Y165* V180F",3
"lib2","SARS-CoV-2","ATGGTAATGCCGAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* K132Y K198G",3
"lib2","SARS-CoV-2","ATGGTAATGCTACTCA",3,53.31,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","L5S S45V T55V D137L",4
"lib2","SARS-CoV-2","ATGGTAATTAAAAAGA",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V R27L V37I V180A",4
"lib2","SARS-CoV-2","ATGGTAATTGAAACGA",2,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101M P197S",2
"lib2","SARS-CoV-2","ATGGTACAAAGTACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G51R I88*",2
"lib2","SARS-CoV-2","ATGGTACACAATTAGA",1,12.1,6,-4.84,2,1.5,1.36,0.03,">1 nonsynonymous","P7H R27E D90Y R136D",4
"lib2","SARS-CoV-2","ATGGTACATAATAAAA",3,89.87,9.51,-1.33,0.1,1.84,1.1,0,">1 nonsynonymous","P82A N130A A192S",3
"lib2","SARS-CoV-2","ATGGTACCGGTTATTA",5,19.01,10.63,-0.21,0.07,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGTACTTAAACATA",5,102.86,10.1,-0.73,0.05,2.84,1.09,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","ATGGTAGATTACCCAG",3,34.16,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A33P T63L V77D Y91R D98S Y119C V173F",7
"lib2","SARS-CoV-2","ATGGTAGCTAAGCGAC",9,337.78,8.59,-2.25,0.07,2.86,1.05,0,">1 nonsynonymous","L5R Q176E",2
"lib2","SARS-CoV-2","ATGGTATAAATTCTAG",7,90.45,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K56H C61N S69K G155L",4
"lib2","SARS-CoV-2","ATGGTATAATAATGAC",17,120.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60V D97N N107H Y123G",4
"lib2","SARS-CoV-2","ATGGTATATTGAGGAA",1,48.84,8.17,-2.66,0.17,1.75,1.08,0.01,">1 nonsynonymous","F99M G166D",2
"lib2","SARS-CoV-2","ATGGTATGGCAATTAA",4,32.78,8.04,-2.79,0.19,2.59,1.07,0.01,">1 nonsynonymous","N130K Y143D",2
"lib2","SARS-CoV-2","ATGGTATGTTATTGCA",4,0.45,NA,NA,NA,NA,NA,NA,"stop","D59* W106M",2
"lib2","SARS-CoV-2","ATGGTATTAGGAAAAA",1,38.42,10.92,0.09,0.06,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGGTATTAGTTATAA",4,50.74,10.8,-0.03,0.04,2.98,1.04,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","ATGGTATTTATGCACG",1,13.86,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","N13D A33Q R179V",3
"lib2","SARS-CoV-2","ATGGTCAAAATATAAA",8,61.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2M T46C V77S T148G",4
"lib2","SARS-CoV-2","ATGGTCAACTTACATT",20,76.06,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A18E N107Y R179K S200M",4
"lib2","SARS-CoV-2","ATGGTCAATACGTGTG",7,119.82,9.02,-1.81,0.19,1.5,1,0.02,">1 nonsynonymous","Y39Q T85H Y93I",3
"lib2","SARS-CoV-2","ATGGTCACATAATGAC",10,281.9,9.52,-1.31,0.05,2.78,1.07,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","ATGGTCATAGGGACGT",4,128.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D97W C150D",2
"lib2","SARS-CoV-2","ATGGTCATGAGCTGGT",10,181.29,9.6,-1.24,0.06,1.96,1.06,0,">1 nonsynonymous","G9V F17S T201K",3
"lib2","SARS-CoV-2","ATGGTCCCAAAACTCT",9,161.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L38S Y50V",2
"lib2","SARS-CoV-2","ATGGTCCCGGGTGTGA",2,12.6,10.37,-0.47,0.11,2.75,1.17,0,">1 nonsynonymous","N4L N151W",2
"lib2","SARS-CoV-2","ATGGTCCGAGAGTTAT",4,51.68,10.94,0.1,0.05,2.98,1.05,0,">1 nonsynonymous","A18S V173M",2
"lib2","SARS-CoV-2","ATGGTCCGTTCTTCAA",3,8.47,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","S19Y F44S F70T A81M S129I",5
"lib2","SARS-CoV-2","ATGGTCCTAGAATACG",7,104.64,8.35,-2.49,0.15,2.78,1.04,0.01,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","ATGGTCCTTTTACTAA",5,143.25,10.72,-0.12,0.04,2.9,1.11,0,">1 nonsynonymous","N1P S45Q",2
"lib2","SARS-CoV-2","ATGGTCGATACCAATT",3,41.46,6.27,-4.57,0.89,1.5,1.23,0.05,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","ATGGTCGTCTGGAGCT",5,15.52,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K48M T100D A105R",3
"lib2","SARS-CoV-2","ATGGTCTAAGTGACTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A F160S",2
"lib2","SARS-CoV-2","ATGGTCTATTCTTCGG",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E G9L T15Y G51R S113T A145P F167P",7
"lib2","SARS-CoV-2","ATGGTCTTCATGGTCC",6,119.64,9.38,-1.45,0.05,2.5,1.05,0,">1 nonsynonymous","E10N D98N Y121A",3
"lib2","SARS-CoV-2","ATGGTCTTGAGACTGA",2,17.47,9,-1.84,0.07,2.32,1.04,0,">1 nonsynonymous","D59Y R73C S164N",3
"lib2","SARS-CoV-2","ATGGTCTTTACTTCAC",15,147.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2T F12Y N107L G117E",4
"lib2","SARS-CoV-2","ATGGTCTTTCCCTCAT",12,162.85,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N110V R127W F160R",3
"lib2","SARS-CoV-2","ATGGTGAAAAATTATA",6,1.29,NA,NA,NA,NA,NA,NA,"stop","E10R K56* R73Y",3
"lib2","SARS-CoV-2","ATGGTGAACCGTTCAC",3,0.08,NA,NA,NA,NA,NA,NA,"stop","R25I Y50N K87* E141* Y178V L183K",6
"lib2","SARS-CoV-2","ATGGTGACGAATTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2P D90W I142*",3
"lib2","SARS-CoV-2","ATGGTGACGTAACAGT",2,71.98,8.08,-2.75,0.2,1.79,1.1,0.02,">1 nonsynonymous","Y35T C61W S113Y",3
"lib2","SARS-CoV-2","ATGGTGACTGACCGGA",9,1.49,NA,NA,NA,NA,NA,NA,"stop","N1I L60S N107V K128*",4
"lib2","SARS-CoV-2","ATGGTGATATATATTA",3,31.69,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88L C158S",2
"lib2","SARS-CoV-2","ATGGTGATGAGCCTAG",1,5.97,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C31L T55N G86L G152V",4
"lib2","SARS-CoV-2","ATGGTGATTCACCAAA",10,67.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y93P P149N F167G",3
"lib2","SARS-CoV-2","ATGGTGCCTACGCCGA",4,38.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A G51S K56Y G83S A105P",5
"lib2","SARS-CoV-2","ATGGTGGCTATAACAG",4,69.68,8.18,-2.65,0.18,1.81,1.04,0.01,">1 nonsynonymous","T55D D112N",2
"lib2","SARS-CoV-2","ATGGTGGGGACAGGAG",1,9.62,10.51,-0.32,0.12,2.94,1,0.01,">1 nonsynonymous","Q144P G152D",2
"lib2","SARS-CoV-2","ATGGTGTGACATAAGC",6,6.78,NA,NA,NA,NA,NA,NA,"stop","L5V D68Q N151*",3
"lib2","SARS-CoV-2","ATGGTGTGGATAGTCC",4,26.57,8.09,-2.74,0.17,2.21,1.21,0.01,">1 nonsynonymous","R136S G166L",2
"lib2","SARS-CoV-2","ATGGTGTGGATATTCC",8,81.98,8.69,-2.14,0.07,2.21,1.09,0,">1 nonsynonymous","Y66E G166A V173G",3
"lib2","SARS-CoV-2","ATGGTGTTAACTACAA",2,56.64,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25P T55L Y123K Y143K F185I T201Q",6
"lib2","SARS-CoV-2","ATGGTTAAACGGATTG",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56F N92A",2
"lib2","SARS-CoV-2","ATGGTTAATATAAAAT",5,18.6,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","L95Q V103E",2
"lib2","SARS-CoV-2","ATGGTTAATGTAAAAT",2,51.11,9.5,-1.34,0.06,2.84,1.09,0,">1 nonsynonymous","Q144C A190T",2
"lib2","SARS-CoV-2","ATGGTTACCAAAGCCA",7,35.06,6.31,-4.53,0.99,1.5,1.29,0.07,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","ATGGTTACGCCCAACT",3,39.29,10.66,-0.17,0.08,2.91,1.04,0,"1 nonsynonymous","V180C",1
"lib2","SARS-CoV-2","ATGGTTAGCGCTAATA",3,17.3,9.28,-1.56,0.11,1.9,1.09,0.01,">1 nonsynonymous","T63V D90L Y178A",3
"lib2","SARS-CoV-2","ATGGTTAGGCACAAAC",3,45,10.74,-0.1,0.06,2.87,1.13,0,"1 nonsynonymous","A190Y",1
"lib2","SARS-CoV-2","ATGGTTCGATACTAAA",7,152.02,10.67,-0.17,0.05,2.92,1.06,0,">1 nonsynonymous","S43Y V65T Y175W T201Q",4
"lib2","SARS-CoV-2","ATGGTTCGCCCTACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L95F R124S V153G Q168* Y175N",5
"lib2","SARS-CoV-2","ATGGTTCTGCAATTCA",4,107.12,8.74,-2.09,0.09,2.63,1.03,0,">1 nonsynonymous","V11I A89T G117K",3
"lib2","SARS-CoV-2","ATGGTTCTGCGGTAAT",10,282.28,8.07,-2.76,0.12,2.69,1.06,0,">1 nonsynonymous","T100S F126E",2
"lib2","SARS-CoV-2","ATGGTTCTGGCAACAA",8,5.52,10.45,-0.38,0.18,2.76,1.27,0.02,"1 nonsynonymous","G196L",1
"lib2","SARS-CoV-2","ATGGTTGAAATACATG",7,26.96,6,-4.84,2,3,1.1,0,">1 nonsynonymous","D112M N118T Q144S T201M",4
"lib2","SARS-CoV-2","ATGGTTGAACAAAAAA",4,38.57,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35A S41T V52C V103T L131Q I142K A190V T201N",8
"lib2","SARS-CoV-2","ATGGTTGAATAAATTT",2,14.59,6,-4.84,2,1.85,1.22,0.01,">1 nonsynonymous","T140P P161H",2
"lib2","SARS-CoV-2","ATGGTTGAATCAAAAA",6,149.92,10.66,-0.17,0.03,2.89,1.06,0,">1 nonsynonymous","A33S N110A",2
"lib2","SARS-CoV-2","ATGGTTGTAGAATTGG",1,16.15,9.55,-1.29,0.1,2.94,1,0,">1 nonsynonymous","N130P N157A",2
"lib2","SARS-CoV-2","ATGGTTTAGAACGATA",3,23.14,6,-4.84,2,3,1.09,0,">1 nonsynonymous","K87S N107L I142H",3
"lib2","SARS-CoV-2","ATGGTTTATAATCTTG",2,12.98,10.55,-0.29,0.1,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGGTTTTTCGCAACA",5,31.19,8.32,-2.51,0.16,2.28,1.04,0.01,">1 nonsynonymous","S113L N120A",2
"lib2","SARS-CoV-2","ATGTAAAAAAACTTCA",2,14.33,7.15,-3.68,0.51,1.5,1.12,0.05,"1 nonsynonymous","D137W",1
"lib2","SARS-CoV-2","ATGTAAAAAACCGCAC",6,55.98,8.71,-2.13,0.13,1.66,1.08,0.01,">1 nonsynonymous","F12C D98K",2
"lib2","SARS-CoV-2","ATGTAAAAAATAGATC",5,112.55,10.65,-0.18,0.02,2.99,1.03,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","ATGTAAAAACACACAG",7,52.49,10.14,-0.7,0.06,2.87,1.1,0,">1 nonsynonymous","L60P N110L",2
"lib2","SARS-CoV-2","ATGTAAAAACGCCCTG",3,102.46,10.02,-0.82,0.08,2.51,1,0,"1 nonsynonymous","L131T",1
"lib2","SARS-CoV-2","ATGTAAAACCGGCGGT",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y S53Q N107L",3
"lib2","SARS-CoV-2","ATGTAAAACGCATTAC",11,178.99,8.89,-1.94,0.2,1.5,1,0.02,">1 nonsynonymous","S29L W106V",2
"lib2","SARS-CoV-2","ATGTAAAACGGACAGG",19,1.21,NA,NA,NA,NA,NA,NA,"stop","S45Y K94* T140I",3
"lib2","SARS-CoV-2","ATGTAAAATAGGCACA",3,8.89,10.87,0.03,0.09,3,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATGTAAAATGTTATAG",1,25.55,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","N30G A81M I104S",3
"lib2","SARS-CoV-2","ATGTAAAATTTACAAG",4,78.16,10.85,0.02,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTAAACAAATCATA",3,42.13,10.31,-0.53,0.07,2.88,1.04,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","ATGTAAACCGAGTATC",5,22.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17S C49S K114V L122I S129C G146W",6
"lib2","SARS-CoV-2","ATGTAAACGTAACTAA",10,269.03,10.85,0.01,0.04,2.95,1.06,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","ATGTAAAGGGTACGTA",7,78.41,10.81,-0.03,0.06,3,1.02,0,">1 nonsynonymous","P7K Y35V",2
"lib2","SARS-CoV-2","ATGTAAAGTTGTAGTC",6,18.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F99L S139W G152R",3
"lib2","SARS-CoV-2","ATGTAAATATGGACTA",1,2.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","ATGTAAATCATGCCAG",7,1.05,NA,NA,NA,NA,NA,NA,"stop","T46C I80M Y93*",3
"lib2","SARS-CoV-2","ATGTAAATGAGTATGA",2,42.43,9.78,-1.06,0.09,2.13,1.06,0,">1 nonsynonymous","N4R T55G D90K E135S",4
"lib2","SARS-CoV-2","ATGTAAATTTATCAAA",10,5.67,NA,NA,NA,NA,NA,NA,"stop","T46A D90I T100* G117S P169L",5
"lib2","SARS-CoV-2","ATGTAAATTTCACACC",14,165.8,10.07,-0.76,0.06,2.3,1.09,0,">1 nonsynonymous","R16H D97Q A105V",3
"lib2","SARS-CoV-2","ATGTAACAAATTATGA",1,6.36,9.88,-0.96,0.4,1.98,1.05,0.05,">1 nonsynonymous","S36M A89G",2
"lib2","SARS-CoV-2","ATGTAACAGTATCCAG",8,45.73,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A33R G83R F126T Q168S G172Y A190S",6
"lib2","SARS-CoV-2","ATGTAACATATACATA",9,41.97,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7T K94P F134M T170L",4
"lib2","SARS-CoV-2","ATGTAACCACACATTC",4,95.18,10.19,-0.65,0.04,2.95,1.03,0,"1 nonsynonymous","Q144W",1
"lib2","SARS-CoV-2","ATGTAACCACGTAAAA",15,4.58,NA,NA,NA,NA,NA,NA,"stop","L57* P149H",2
"lib2","SARS-CoV-2","ATGTAACCGGTCTATA",7,72.62,10.53,-0.3,0.05,2.82,1.12,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","ATGTAACCGTCCCATA",4,70.71,10.38,-0.45,0.06,2.9,1.11,0,"1 nonsynonymous","D34C",1
"lib2","SARS-CoV-2","ATGTAACGAACAACCA",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G I80V",2
"lib2","SARS-CoV-2","ATGTAACGAAGAACGG",4,7.76,NA,NA,NA,NA,NA,NA,"stop","N40* G116Q G146L",3
"lib2","SARS-CoV-2","ATGTAACGCGGAGAGG",3,0.85,NA,NA,NA,NA,NA,NA,"stop","V103* T140N",2
"lib2","SARS-CoV-2","ATGTAACTCGAAATTA",5,2.61,NA,NA,NA,NA,NA,NA,"stop","Y35Q G74* D90T N110P C150Y",5
"lib2","SARS-CoV-2","ATGTAAGAATCCACAT",1,12.85,9.52,-1.32,0.18,1.99,1.14,0.01,">1 nonsynonymous","A14T A89V",2
"lib2","SARS-CoV-2","ATGTAAGAATTTTTCG",2,31.04,10.78,-0.05,0.08,2.91,1.09,0,"1 nonsynonymous","N40D",1
"lib2","SARS-CoV-2","ATGTAAGACTGCGTAA",1,16.87,8,-2.84,0.3,1.71,1.1,0.03,">1 nonsynonymous","D34V Y119F P169A G196F",4
"lib2","SARS-CoV-2","ATGTAAGAGACAAAAA",2,29.85,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y50S I88K K132M",3
"lib2","SARS-CoV-2","ATGTAAGCATCCTAGA",5,54.75,9.77,-1.06,0.04,1.85,1.07,0,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","ATGTAAGCCTTACTAT",5,124.91,8.87,-1.96,0.07,2.81,1.07,0,">1 nonsynonymous","N1G R27Y T55D D98M N157D",5
"lib2","SARS-CoV-2","ATGTAAGGTCTCGTAT",1,14.75,8.4,-2.43,0.29,1.5,1.18,0.03,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","ATGTAAGTAAACACTA",2,2.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","ATGTAAGTAACATTCC",2,41.68,9.4,-1.43,0.09,2.87,1.07,0,">1 nonsynonymous","L5D Y119V",2
"lib2","SARS-CoV-2","ATGTAAGTCAAAACAT",2,26.84,6.82,-4.02,0.37,1.5,1.12,0.02,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","ATGTAATAATATAAAC",23,513.99,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","V71A A81T C150L",3
"lib2","SARS-CoV-2","ATGTAATAATTAGTTA",3,25.24,10.65,-0.18,0.04,2.94,1.07,0,">1 nonsynonymous","K56I F160M",2
"lib2","SARS-CoV-2","ATGTAATAATTGAGAA",1,7.56,9.92,-0.91,0.12,2.94,1.04,0.01,">1 nonsynonymous","F156S P191L",2
"lib2","SARS-CoV-2","ATGTAATAGTGTACTG",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107D F126P",2
"lib2","SARS-CoV-2","ATGTAATCAACGAAAC",10,201.09,10.82,-0.02,0.03,2.96,1.07,0,"1 nonsynonymous","K56H",1
"lib2","SARS-CoV-2","ATGTAATCGAAAAATT",4,30.21,10.77,-0.07,0.09,2.97,1.07,0,">1 nonsynonymous","T15P A33W",2
"lib2","SARS-CoV-2","ATGTAATCTACAGACG",1,1.36,NA,NA,NA,NA,NA,NA,"stop","Y39* G83S K199L",3
"lib2","SARS-CoV-2","ATGTAATGAAAGGCAA",8,32.28,6,-4.84,0.82,1.5,1.12,0.01,">1 nonsynonymous","C61L D112L T140N V181R",4
"lib2","SARS-CoV-2","ATGTAATGAACAGACA",4,55.2,9.96,-0.87,0.04,2.91,1.04,0,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","ATGTAATGCTTAGTAT",3,54.91,9.89,-0.95,0.05,2.92,1.06,0,">1 nonsynonymous","C6G V173H",2
"lib2","SARS-CoV-2","ATGTAATGTTAATTAA",8,0.23,NA,NA,NA,NA,NA,NA,"stop","G51V L122* L183P",3
"lib2","SARS-CoV-2","ATGTAATTAAATCAAC",1,83.21,10.82,-0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTAATTCATACACT",5,0.28,NA,NA,NA,NA,NA,NA,"stop","L122R Q168*",2
"lib2","SARS-CoV-2","ATGTAATTCTCCTTCG",3,73.94,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5P Q84D Q176R",3
"lib2","SARS-CoV-2","ATGTAATTGGGTGACA",17,165.16,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A14R V37M F99S G116N N171K",5
"lib2","SARS-CoV-2","ATGTAATTTCCCACCT",4,23.45,10.18,-0.65,0.07,2.74,1.07,0,"1 nonsynonymous","D34P",1
"lib2","SARS-CoV-2","ATGTACAAACGTCCTG",3,35.52,10.6,-0.24,0.05,2.9,1.08,0,">1 nonsynonymous","T46W Q84R",2
"lib2","SARS-CoV-2","ATGTACAAGTGGTACA",8,58.1,9.98,-0.85,0.11,2.3,1,0,">1 nonsynonymous","A14V T15N T148G V153R",4
"lib2","SARS-CoV-2","ATGTACAATACACAAT",3,21.07,6.59,-4.24,0.18,2.61,1.11,0,">1 nonsynonymous","T55A N107S P161S L188Y",4
"lib2","SARS-CoV-2","ATGTACACAAATGGGC",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K A89S Y165C",3
"lib2","SARS-CoV-2","ATGTACACCCACGAGT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","A81S T85W I88A F99* L122T S129Q C158L",7
"lib2","SARS-CoV-2","ATGTACACCGAAATCA",2,16.51,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C49N Y119F",2
"lib2","SARS-CoV-2","ATGTACACCTCCACTT",1,14.23,10.41,-0.43,0.09,2.76,1.22,0.01,">1 nonsynonymous","V37N G152L",2
"lib2","SARS-CoV-2","ATGTACACCTTAGAAA",3,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y T85S",2
"lib2","SARS-CoV-2","ATGTACACGAGGCACG",2,14.18,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I88H P96I C150V",3
"lib2","SARS-CoV-2","ATGTACACTCACATCG",4,66.43,10.23,-0.61,0.04,2.97,1.02,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","ATGTACAGACAACTCG",3,12.2,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C61Y S69L G83Y S139T Y159M",5
"lib2","SARS-CoV-2","ATGTACAGACAGACAC",2,27.83,10.73,-0.1,0.07,2.9,1.08,0,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","ATGTACAGTATTAATC",14,309.85,6.18,-4.66,0.31,1.5,1.11,0,">1 nonsynonymous","T46C T100F C150A",3
"lib2","SARS-CoV-2","ATGTACATAGAAACCA",2,46.81,10.85,0.01,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTACATCATCAATA",11,64.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20T C31L S45A C61M V103A G116R E141P",7
"lib2","SARS-CoV-2","ATGTACATTAATATCT",2,0,NA,NA,NA,NA,NA,NA,"stop","S45T D90Y Y123I E154I K198*",5
"lib2","SARS-CoV-2","ATGTACATTACAGTAA",4,35.05,6,-4.84,1.17,1.5,1.12,0.01,">1 nonsynonymous","A81R Y91V E141R L162S",4
"lib2","SARS-CoV-2","ATGTACCGCATACGAT",2,26.41,10.87,0.03,0.06,2.85,1.13,0,">1 nonsynonymous","S36Q P149Q",2
"lib2","SARS-CoV-2","ATGTACCTAAGACACA",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H L60C K87S E141W T201S",5
"lib2","SARS-CoV-2","ATGTACCTCACATGCA",6,96.61,6.07,-4.76,0.78,1.5,1.13,0.02,">1 nonsynonymous","W23K G51A V103M I138G",4
"lib2","SARS-CoV-2","ATGTACCTCTAACATT",12,85.65,10.4,-0.44,0.07,2.89,1.03,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","ATGTACGAGTTAGTTA",10,54.13,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","Y93G V103K S184F",3
"lib2","SARS-CoV-2","ATGTACGCATTACCCA",2,39.13,8.21,-2.63,0.21,2.44,1.21,0.02,">1 nonsynonymous","I2T D90C G117R",3
"lib2","SARS-CoV-2","ATGTACGCCAAACCAC",2,14.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R N107S",2
"lib2","SARS-CoV-2","ATGTACGGCGCACAAA",1,12.16,10.17,-0.66,0.22,2.41,1.35,0.02,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","ATGTACGTTGCTTCTG",4,59.71,8.67,-2.17,0.2,1.72,1.17,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","ATGTACGTTTATGTGC",15,432.3,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y39R G86V Y143S T170R",4
"lib2","SARS-CoV-2","ATGTACTAGCCAATAA",9,98.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6V G86W",2
"lib2","SARS-CoV-2","ATGTACTCATTTGTGA",4,24.27,8.66,-2.17,0.25,1.5,1,0.03,">1 nonsynonymous","N1K W23L V37L",3
"lib2","SARS-CoV-2","ATGTACTGATGTTCCG",7,53.39,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","L57S D112Q",2
"lib2","SARS-CoV-2","ATGTACTGCGCAGACT",1,19.26,10.18,-0.66,0.12,2.73,1,0.01,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","ATGTACTTACAAAAAG",9,44.73,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T85C C102N P133E",3
"lib2","SARS-CoV-2","ATGTAGAACCGAGTCG",3,37.48,10.88,0.05,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTAGATTACACGGC",2,21.91,10.34,-0.5,0.07,2.98,1.03,0,">1 nonsynonymous","C61R K94N",2
"lib2","SARS-CoV-2","ATGTAGCAACGCAAAC",4,20.51,10.88,0.05,0.09,2.87,1.16,0,">1 nonsynonymous","G9H L95V",2
"lib2","SARS-CoV-2","ATGTAGGAAATTAAAT",3,29.17,10.62,-0.22,0.04,2.99,1,0,">1 nonsynonymous","F134S F160A",2
"lib2","SARS-CoV-2","ATGTAGGCGTGGTTCC",6,95.09,10.96,0.12,0.05,2.95,1.05,0,"1 nonsynonymous","L122M",1
"lib2","SARS-CoV-2","ATGTAGTACTCAGGCC",3,72.01,10.79,-0.05,0.05,2.92,1.1,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","ATGTAGTGAAATAATA",1,11.96,8.33,-2.5,0.2,2.68,1.05,0.02,">1 nonsynonymous","Y35K T170F",2
"lib2","SARS-CoV-2","ATGTAGTTGACTTAGT",9,28.83,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T148Y Q168P L183A",3
"lib2","SARS-CoV-2","ATGTATAAAAGATATA",11,141.07,10.25,-0.59,0.03,2.95,1.07,0,">1 nonsynonymous","K87V P133F",2
"lib2","SARS-CoV-2","ATGTATAAATCGTGTG",1,31.07,10.6,-0.24,0.05,2.93,1.09,0,">1 nonsynonymous","A81R T201L",2
"lib2","SARS-CoV-2","ATGTATAAATGTACTT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","C61R R124S E141* G166R",4
"lib2","SARS-CoV-2","ATGTATAACCCATCGG",10,221.59,10.94,0.1,0.05,2.91,1.09,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","ATGTATAACCCTATAC",7,39.7,9.03,-1.81,0.09,1.91,1.11,0,">1 nonsynonymous","S41P G116P E141G V173G",4
"lib2","SARS-CoV-2","ATGTATACCAAACCAT",5,54.16,7.78,-3.05,0.25,1.5,1.08,0.02,">1 nonsynonymous","A33H L122F R136D",3
"lib2","SARS-CoV-2","ATGTATACCTGGATGG",5,58.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31P P96M P133D P149V",4
"lib2","SARS-CoV-2","ATGTATACGCGATCAC",5,103.35,10.82,-0.02,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTATATCACAAAGC",8,137.43,10.77,-0.07,0.05,3,1.03,0,"1 nonsynonymous","S41Q",1
"lib2","SARS-CoV-2","ATGTATATTAAGTTTT",1,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D Y91Q L122R",3
"lib2","SARS-CoV-2","ATGTATATTTGTCCTA",1,17.84,9.15,-1.68,0.11,2.94,1.11,0.01,">1 nonsynonymous","N157S S200V",2
"lib2","SARS-CoV-2","ATGTATCACAAATTGC",8,90.55,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C49G S147F P177E",3
"lib2","SARS-CoV-2","ATGTATCACCACCATC",5,0.25,NA,NA,NA,NA,NA,NA,"stop","I2R P7* G155L Q168F",4
"lib2","SARS-CoV-2","ATGTATCCAAAGCTAA",3,86.45,10.86,0.03,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTATCCATACATAT",20,95.17,6.28,-4.55,0.6,1.5,1.19,0.01,">1 nonsynonymous","P82L S129Y F160I",3
"lib2","SARS-CoV-2","ATGTATCCTCTCTAAA",5,61.97,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A22S K87P L122R C150Y",4
"lib2","SARS-CoV-2","ATGTATCTCCACCTTA",2,58.23,6.45,-4.38,0.36,1.5,1.19,0.01,">1 nonsynonymous","N64L N120M S184P",3
"lib2","SARS-CoV-2","ATGTATCTGTCTAGCA",6,93.36,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y123C C158F",2
"lib2","SARS-CoV-2","ATGTATGAGCATGTTA",5,12.42,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T15L F62R V115I L162Y",4
"lib2","SARS-CoV-2","ATGTATGATACACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","ATGTATGATAGTGGAG",1,0.34,NA,NA,NA,NA,NA,NA,"stop","K94* E135G",2
"lib2","SARS-CoV-2","ATGTATGCTCTCTTTA",10,42.39,6,-4.84,2,3,1.17,0,">1 nonsynonymous","E10D V20Y P54L Q168P",4
"lib2","SARS-CoV-2","ATGTATGGACATACTA",1,13.64,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C61I A67T Y143P",3
"lib2","SARS-CoV-2","ATGTATGGCTATTGAC",8,68.35,10.59,-0.25,0.04,2.93,1.04,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","ATGTATGTACCAAAGC",7,69.94,8.1,-2.74,0.21,1.88,1.16,0.02,">1 nonsynonymous","S41R G116W G155P",3
"lib2","SARS-CoV-2","ATGTATGTCCCTGGTG",4,9.86,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D90Q N107I G117E",3
"lib2","SARS-CoV-2","ATGTATTACATTGGGA",4,26.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14V C49L N58R D137Y C150I Q176L",6
"lib2","SARS-CoV-2","ATGTATTATACCTATA",3,40.86,10.78,-0.05,0.05,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTATTATAGAAGAT",4,1.38,NA,NA,NA,NA,NA,NA,"stop","F8* Y91S P149I",3
"lib2","SARS-CoV-2","ATGTATTCGTGCAATA",2,25.19,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V11G N107A S139F",3
"lib2","SARS-CoV-2","ATGTATTGAATTCACG",2,7.29,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L38N C49V A192L",3
"lib2","SARS-CoV-2","ATGTATTGGCACTTAG",9,147.11,8.63,-2.21,0.07,2.57,1.09,0,">1 nonsynonymous","D34A Y119S",2
"lib2","SARS-CoV-2","ATGTATTGGTCGAGCG",4,23.12,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A42R N92V R124A K132G G146L",5
"lib2","SARS-CoV-2","ATGTATTTACTGCTGT",9,116.92,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","P7L C150F",2
"lib2","SARS-CoV-2","ATGTCAAAATTACTGC",6,1.3,NA,NA,NA,NA,NA,NA,"stop","S43E S69E V103L L122* F156I L162M Y178T",7
"lib2","SARS-CoV-2","ATGTCAAACCGGTAAG",10,11.6,NA,NA,NA,NA,NA,NA,"stop","F12R A42G D90* I142N",4
"lib2","SARS-CoV-2","ATGTCAAATGAGGAAT",3,0.04,NA,NA,NA,NA,NA,NA,"stop","T46* Q144D",2
"lib2","SARS-CoV-2","ATGTCAACACACACCT",3,17.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57W V77R D98R",3
"lib2","SARS-CoV-2","ATGTCAACCAATAATT",5,35.46,9.71,-1.12,0.04,1.94,1.04,0,">1 nonsynonymous","A33Q T55A N64T T100D K199T",5
"lib2","SARS-CoV-2","ATGTCAACTCTAACTA",5,28.46,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N92R Y119R Q176G",3
"lib2","SARS-CoV-2","ATGTCAAGAATAAAAG",2,0.63,NA,NA,NA,NA,NA,NA,"stop","L5* A33L C61S R124F",4
"lib2","SARS-CoV-2","ATGTCAAGGATAGGAT",13,187.7,6,-4.84,2,1.5,1.4,0.04,">1 nonsynonymous","F99S W106S G155R",3
"lib2","SARS-CoV-2","ATGTCAAGTGCCTAGT",8,47.65,9.73,-1.11,0.1,1.82,1.04,0.01,">1 nonsynonymous","T3S G9P S41L A81H",4
"lib2","SARS-CoV-2","ATGTCAATTTGGTCCG",5,25.04,10.4,-0.43,0.1,2.91,1.09,0,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","ATGTCAATTTTAATCT",9,85.3,10.86,0.02,0.07,2.84,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTCACAGCGTACTA",7,41.36,10.04,-0.79,0.1,2.29,1,0.01,">1 nonsynonymous","F99M P149H",2
"lib2","SARS-CoV-2","ATGTCACCCCCCTTAA",5,88.92,10,-0.84,0.08,2.6,1,0,">1 nonsynonymous","D137C L187T",2
"lib2","SARS-CoV-2","ATGTCACCTGTTACAC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","V37L G146* E154M",3
"lib2","SARS-CoV-2","ATGTCACTATCCATCA",2,72.26,10.75,-0.09,0.05,2.94,1.05,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","ATGTCACTTGAGACGA",3,18.29,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","I28V S69I K87D D97L W106M L162I",6
"lib2","SARS-CoV-2","ATGTCAGAAATACGAC",11,40.62,9.86,-0.97,0.07,2.15,1.02,0,"1 nonsynonymous","Y21L",1
"lib2","SARS-CoV-2","ATGTCAGCAACGAAAA",1,41.79,10.57,-0.27,0.08,2.85,1.16,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","ATGTCAGGATAACTAG",2,18.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L5S G86P",2
"lib2","SARS-CoV-2","ATGTCAGTAGAATATT",13,173.53,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86F R124P F156I P197I",4
"lib2","SARS-CoV-2","ATGTCAGTCCACAGCT",8,174.93,8.18,-2.66,0.18,1.93,1.08,0.01,">1 nonsynonymous","L95V Y119V P133F",3
"lib2","SARS-CoV-2","ATGTCAGTCTAAGCAT",12,108.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N24T P82N Q168P",3
"lib2","SARS-CoV-2","ATGTCATACCTCTAAG",9,92.55,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5N L38S A105L C158K F167V",5
"lib2","SARS-CoV-2","ATGTCATACTAATAAA",13,82.84,6,-4.84,2,1.5,1.43,0.05,">1 nonsynonymous","Y93C S113Y N118F",3
"lib2","SARS-CoV-2","ATGTCATCGTATTTGC",9,21.25,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A22G T85D P161Y V181H",4
"lib2","SARS-CoV-2","ATGTCATGATGTTTTC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","E135*",1
"lib2","SARS-CoV-2","ATGTCATGGTAATGTA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","Y123T F160* T201S",3
"lib2","SARS-CoV-2","ATGTCATTAGAGGTGG",3,69.53,10.81,-0.03,0.05,2.95,1.06,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","ATGTCATTCAATCATG",1,24.72,10.88,0.04,0.07,2.95,1.06,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","ATGTCATTCCTTTTTA",10,103.47,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I28E N92S A105T",3
"lib2","SARS-CoV-2","ATGTCCAAAATGCAAT",1,8.29,7.03,-3.8,0.48,1.5,1.07,0.04,">1 nonsynonymous","S43A D98G Y123M A145I Q168L",5
"lib2","SARS-CoV-2","ATGTCCAACTCCGGGT",7,107.39,10.7,-0.14,0.04,2.88,1.05,0,">1 nonsynonymous","T15R V65M",2
"lib2","SARS-CoV-2","ATGTCCAATCACAGTC",5,111.22,10.62,-0.21,0.04,2.92,1.06,0,">1 nonsynonymous","P54E N64L",2
"lib2","SARS-CoV-2","ATGTCCAATCATATAA",13,103.31,9.3,-1.53,0.22,1.5,1,0.02,">1 nonsynonymous","G83L F99H G152S H189G",4
"lib2","SARS-CoV-2","ATGTCCACAATATATA",8,3.86,NA,NA,NA,NA,NA,NA,"stop","D34Y N40V G83K W106G D112N Y123*",6
"lib2","SARS-CoV-2","ATGTCCACATTGTAAG",8,21.63,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C49W G51A A81T R136K E141F G152S",6
"lib2","SARS-CoV-2","ATGTCCAGGAAGACCT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","Y35R Q168* G174E V182R",4
"lib2","SARS-CoV-2","ATGTCCATATCTAGAA",5,112.65,9.18,-1.66,0.03,2.92,1.09,0,"1 nonsynonymous","N157G",1
"lib2","SARS-CoV-2","ATGTCCCCCACTTAAC",1,92.6,10.83,0,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTCCCGCCATTTTA",2,25.21,10.11,-0.72,0.05,2.98,1.06,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","ATGTCCCTAACAGCAT",7,9.6,NA,NA,NA,NA,NA,NA,"stop","K48V N64Q V77* W106D L122Y",5
"lib2","SARS-CoV-2","ATGTCCCTTTCCCCAG",7,5.08,NA,NA,NA,NA,NA,NA,"stop","P82S G83L E141*",3
"lib2","SARS-CoV-2","ATGTCCGAAAAAATGT",12,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N V181L",2
"lib2","SARS-CoV-2","ATGTCCGAAACTACAA",10,106.46,10.76,-0.08,0.03,2.93,1.04,0,"1 nonsynonymous","R27Y",1
"lib2","SARS-CoV-2","ATGTCCGAGGCCGATT",7,163.76,10.86,0.02,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTCCGCATGCGTGG",2,35.82,10.81,-0.03,0.05,2.81,1.18,0,">1 nonsynonymous","L60M T85K",2
"lib2","SARS-CoV-2","ATGTCCGTGGCACATA",1,0.4,NA,NA,NA,NA,NA,NA,"stop","T3R I28* P96C K128V S147A F156P",6
"lib2","SARS-CoV-2","ATGTCCGTTGAACATT",1,31.6,8.98,-1.85,0.18,1.96,1.1,0.01,">1 nonsynonymous","L5P N13M Q176H",3
"lib2","SARS-CoV-2","ATGTCCTAAAACAAAT",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A S69M A105N N118V",4
"lib2","SARS-CoV-2","ATGTCCTACTCCCAAC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGTCCTCGCTAAAAA",5,102.5,8.93,-1.9,0.07,1.86,1.08,0,">1 nonsynonymous","A14V C31T S36P T85K T201Y",5
"lib2","SARS-CoV-2","ATGTCCTGTACTGAGA",7,59.58,9.3,-1.54,0.15,1.73,1.16,0.01,">1 nonsynonymous","L5M F62S K94M",3
"lib2","SARS-CoV-2","ATGTCCTTATCCAGCA",2,17.92,10.89,0.05,0.06,2.96,1.05,0,">1 nonsynonymous","N1L K198M",2
"lib2","SARS-CoV-2","ATGTCCTTATTCGCCA",7,29.04,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3N A22F F99N T148Q",4
"lib2","SARS-CoV-2","ATGTCCTTTATAGGAC",3,68.25,10.68,-0.15,0.06,2.94,1.09,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","ATGTCGAAGAAGTTTT",3,5.22,6,-4.84,1.02,3,1.06,0.01,">1 nonsynonymous","Y35H T63I A105Q",3
"lib2","SARS-CoV-2","ATGTCGAGACATTCAA",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N S19K V37E",3
"lib2","SARS-CoV-2","ATGTCGGAGGATAAGT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","S41T C49L V77T G86E Y165*",5
"lib2","SARS-CoV-2","ATGTCGTAACACGCTA",3,0.11,NA,NA,NA,NA,NA,NA,"stop","L95* T170I P177C",3
"lib2","SARS-CoV-2","ATGTCGTTGTACAAGT",3,2.52,NA,NA,NA,NA,NA,NA,"stop","S36R T55F T100S N120*",4
"lib2","SARS-CoV-2","ATGTCGTTGTTGCTAT",2,35.17,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T55G R124W G146P",3
"lib2","SARS-CoV-2","ATGTCTAAAGACGTGA",1,42.83,10.83,-0.01,0.08,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTCTAAATCATAAA",13,165.77,10.73,-0.1,0.05,2.9,1.09,0,">1 nonsynonymous","V37I N120M",2
"lib2","SARS-CoV-2","ATGTCTAACTTCCCAA",3,45.74,6.92,-3.92,0.36,1.5,1.13,0.02,">1 nonsynonymous","I28A S43T D59H D90H S164Q",5
"lib2","SARS-CoV-2","ATGTCTAACTTGTACA",10,66.49,7.76,-3.08,0.21,1.5,1.11,0.01,">1 nonsynonymous","F47I A81N F185Y",3
"lib2","SARS-CoV-2","ATGTCTAAGCAATAAC",1,34.23,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S45R Y165C",2
"lib2","SARS-CoV-2","ATGTCTAATTTCATCC",4,2.12,NA,NA,NA,NA,NA,NA,"stop","T46* L60* P96M D112L",4
"lib2","SARS-CoV-2","ATGTCTACGAACAAAA",4,85.85,10.67,-0.17,0.08,2.78,1.18,0,"1 nonsynonymous","D97M",1
"lib2","SARS-CoV-2","ATGTCTAGATTAAACT",6,30.39,10.5,-0.34,0.05,2.92,1.02,0,">1 nonsynonymous","L5D K128T N151F L188F A192I",5
"lib2","SARS-CoV-2","ATGTCTAGGGATATCC",2,26.12,10.41,-0.43,0.06,2.93,1.03,0,">1 nonsynonymous","T15L K114T",2
"lib2","SARS-CoV-2","ATGTCTATGAAAGTTA",17,233.18,9.29,-1.55,0.04,2.91,1.09,0,">1 nonsynonymous","A33W Y91F N120P",3
"lib2","SARS-CoV-2","ATGTCTCAAAATAGTT",2,25.68,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Q84R D112L Y119K",3
"lib2","SARS-CoV-2","ATGTCTCAAAGGTCAA",6,91.46,8.87,-1.96,0.08,1.82,1.12,0,">1 nonsynonymous","D90Y N120Y I138P",3
"lib2","SARS-CoV-2","ATGTCTGAAAGCTCAG",3,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E D68K K114S",3
"lib2","SARS-CoV-2","ATGTCTGACCGAAGGT",3,192.89,10.47,-0.37,0.03,2.9,1.06,0,">1 nonsynonymous","D90R G152S",2
"lib2","SARS-CoV-2","ATGTCTGATGTGCTGA",6,46.64,10.9,0.07,0.09,2.86,1.09,0,">1 nonsynonymous","I2P L122W",2
"lib2","SARS-CoV-2","ATGTCTGCAAGCCAGG",6,113.44,10.79,-0.05,0.02,2.94,1.07,0,"1 nonsynonymous","T46I",1
"lib2","SARS-CoV-2","ATGTCTTAATCTTTGT",1,17.17,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C102L C158K G174R",3
"lib2","SARS-CoV-2","ATGTCTTAGTTAGCCT",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R D59Y D112L R136F T201E",5
"lib2","SARS-CoV-2","ATGTCTTCACACACTT",4,106.7,10.78,-0.06,0.05,2.96,1.06,0,"1 nonsynonymous","H189I",1
"lib2","SARS-CoV-2","ATGTCTTGTGCTATGA",2,80.01,10.83,0,0.06,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGAAAACGCTCCG",11,29.68,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","I88R",1
"lib2","SARS-CoV-2","ATGTGAAGATCCCACC",3,16.73,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K48N Y121N R136H F156Y V181H T201A",6
"lib2","SARS-CoV-2","ATGTGAATGCTTCAAT",5,110.23,10.13,-0.7,0.06,2.39,1.05,0,">1 nonsynonymous","N1T A105V",2
"lib2","SARS-CoV-2","ATGTGACAAATCTAAG",17,30.32,7.91,-2.92,0.35,1.57,1.25,0.06,">1 nonsynonymous","A33Y I88C R124M",3
"lib2","SARS-CoV-2","ATGTGACAGGACTAAT",6,6.87,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","L5K N13G N64C P96C S113T Q176M V181Q",7
"lib2","SARS-CoV-2","ATGTGACCGCAACAAT",27,211.64,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19I R25T N107K G155P",4
"lib2","SARS-CoV-2","ATGTGACCGTTACTTT",22,27.24,NA,NA,NA,NA,NA,NA,"stop","A14P N24F Y121* P133W Y143L",5
"lib2","SARS-CoV-2","ATGTGACCTTTCTATA",2,27.71,9.05,-1.79,0.2,2.57,1.06,0.02,">1 nonsynonymous","F47W L122M G166C",3
"lib2","SARS-CoV-2","ATGTGACGGCTTCTAA",3,8.44,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","A89L Y93F Q163S",3
"lib2","SARS-CoV-2","ATGTGACTTAACATGA",5,100.2,10.69,-0.14,0.03,2.91,1.09,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","ATGTGAGAAATACCTC",2,46.3,8.94,-1.89,0.2,1.64,1.16,0.01,">1 nonsynonymous","L57C T140Y S147I",3
"lib2","SARS-CoV-2","ATGTGAGAATACAAGG",3,52.09,9.85,-0.98,0.1,2.2,1.16,0,">1 nonsynonymous","I28L K94V",2
"lib2","SARS-CoV-2","ATGTGAGCCACTGTCT",3,14.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103A L111C",2
"lib2","SARS-CoV-2","ATGTGAGGAAATTTTG",11,111.76,7.64,-3.2,0.09,1.77,1.12,0,">1 nonsynonymous","C61A G117C S147C N151M",4
"lib2","SARS-CoV-2","ATGTGAGGTAAATTAC",5,18.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K D68E W106S E135H G174M T201V",6
"lib2","SARS-CoV-2","ATGTGATAAAAACAAT",1,7.08,6.27,-4.56,0.76,1.5,1.07,0.03,">1 nonsynonymous","S41P G51C N157Y",3
"lib2","SARS-CoV-2","ATGTGATAACAAGACG",4,32.81,10.91,0.07,0.08,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGATAGAATTTTC",1,22.89,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","R27F T55L P82S L111I R127A",5
"lib2","SARS-CoV-2","ATGTGATATTAACATA",5,19.35,10.82,-0.02,0.03,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGATGGTACCAGC",2,2.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","ATGTGATGGTAGGAAT",3,95.19,10.73,-0.1,0.03,2.87,1.15,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ATGTGATTGATTGTAA",3,49.13,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L38R P82Y A190C",3
"lib2","SARS-CoV-2","ATGTGCAAGATCTAAT",8,65.7,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N64L D90V G172R Y178R",4
"lib2","SARS-CoV-2","ATGTGCAATACCACAC",7,37.43,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","F62Y G117D E154R P177E T201V",5
"lib2","SARS-CoV-2","ATGTGCAATATATCCG",5,51.22,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I88R A105W A190V",3
"lib2","SARS-CoV-2","ATGTGCAATTGCACCA",2,9.85,10.77,-0.07,0.04,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGCACATAAGAAA",2,22.34,9.18,-1.65,0.32,1.5,1.13,0.07,">1 nonsynonymous","L60R L95M Y143L",3
"lib2","SARS-CoV-2","ATGTGCACCGTTGCAG",7,34.14,6,-4.84,2,2.03,1.13,0.01,">1 nonsynonymous","V71R P82Y G86D I104A V153N N157C",6
"lib2","SARS-CoV-2","ATGTGCAGTAATACTT",6,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I Y123P T148L",3
"lib2","SARS-CoV-2","ATGTGCATAATATTGT",3,21.38,10.62,-0.22,0.06,3,1,0,">1 nonsynonymous","A33C T46S C61M",3
"lib2","SARS-CoV-2","ATGTGCATGATCAAAA",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T P96L Y123K",3
"lib2","SARS-CoV-2","ATGTGCATTTTTTGGC",3,39.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9S N92Q F167Y",3
"lib2","SARS-CoV-2","ATGTGCCACAGATTGA",6,43.88,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y178Q V182K",2
"lib2","SARS-CoV-2","ATGTGCCAGTTAATGC",2,1.1,NA,NA,NA,NA,NA,NA,"stop","E135S S147*",2
"lib2","SARS-CoV-2","ATGTGCCATTCCCCAA",3,7.86,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","F44W I80S L95T",3
"lib2","SARS-CoV-2","ATGTGCCCACCTGAAT",9,42.66,6,-4.84,2,1.5,1.22,0.06,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","ATGTGCCCTCACGGAT",1,17.74,6.81,-4.03,0.36,1.5,1.05,0.02,">1 nonsynonymous","P7R S19P D137L",3
"lib2","SARS-CoV-2","ATGTGCCTATGGTACT",3,55.27,10.06,-0.78,0.08,1.98,1.07,0,">1 nonsynonymous","L5S W106T L122I",3
"lib2","SARS-CoV-2","ATGTGCCTCTGTATAA",1,0.56,NA,NA,NA,NA,NA,NA,"stop","Y21K R27G K48*",3
"lib2","SARS-CoV-2","ATGTGCCTGAAATGAC",3,45.84,10.8,-0.04,0.06,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","ATGTGCCTTCTGAAAT",2,13.23,10.9,0.06,0.13,2.91,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGCGGCCTTTCAA",5,12.81,6.1,-4.73,1.07,1.5,1.09,0.05,">1 nonsynonymous","R27K V103D F167V",3
"lib2","SARS-CoV-2","ATGTGCGGGCTCTTGT",12,7.04,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34T L183P L187Q K198H",4
"lib2","SARS-CoV-2","ATGTGCGGTCGCACCA",6,13.35,6.18,-4.66,2,1.5,1.26,0.03,">1 nonsynonymous","N13K P54G Q84P E154H F160M A190I",6
"lib2","SARS-CoV-2","ATGTGCGTGCCGTAAG",7,67.68,11.01,0.17,0.04,2.98,1.03,0,">1 nonsynonymous","G9M R16E L122S",3
"lib2","SARS-CoV-2","ATGTGCTAGTGAAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","N58H Y93* P169L",3
"lib2","SARS-CoV-2","ATGTGCTCAATTTACT",4,134.37,9.71,-1.12,0.09,2.46,1.05,0,">1 nonsynonymous","G9L V37T N58I G83N",4
"lib2","SARS-CoV-2","ATGTGCTCACCACAAC",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F F8V I80V W106K T201L",5
"lib2","SARS-CoV-2","ATGTGCTTGTGGCCTT",3,93.89,10.79,-0.05,0.03,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGGAATCTAGCAA",2,7.84,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F44N K87S Y91V P96T",4
"lib2","SARS-CoV-2","ATGTGGACAAACACAT",6,47.66,10.23,-0.6,0.04,2.87,1.08,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","ATGTGGACATGTTAGA",5,187.72,10.66,-0.18,0.04,2.92,1.09,0,"1 nonsynonymous","F160P",1
"lib2","SARS-CoV-2","ATGTGGACTTCTAAAC",5,20.69,6,-4.84,1.04,3,1.11,0.01,">1 nonsynonymous","Y119L D137G S184P",3
"lib2","SARS-CoV-2","ATGTGGATAAATCAAT",3,42.52,10.58,-0.25,0.08,2.94,1.03,0,"1 nonsynonymous","Q144V",1
"lib2","SARS-CoV-2","ATGTGGATATCGCGAG",1,15.58,9.43,-1.41,0.08,2.85,1.12,0,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","ATGTGGCCACTAAAAA",10,121.06,10.84,0.01,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTGGCTCCTGGATA",6,182.08,10.52,-0.31,0.05,2.91,1.03,0,">1 nonsynonymous","G9K F160L",2
"lib2","SARS-CoV-2","ATGTGGCTCGCGGTAT",11,3.3,NA,NA,NA,NA,NA,NA,"stop","C6* S36I N40G D90N N157*",5
"lib2","SARS-CoV-2","ATGTGGGGCGAATGGC",1,8.29,9.64,-1.2,0.3,1.81,1.12,0.04,">1 nonsynonymous","T3W T63N K94D",3
"lib2","SARS-CoV-2","ATGTGGGTGTTACAAC",7,28.57,10.61,-0.22,0.12,2.87,1.1,0,">1 nonsynonymous","P7S V37Q",2
"lib2","SARS-CoV-2","ATGTGGTAGCACAATA",6,82.35,10.13,-0.71,0.07,2.75,1.1,0,"1 nonsynonymous","Y123N",1
"lib2","SARS-CoV-2","ATGTGGTTCGAGAAGT",7,85.94,6.36,-4.48,0.58,1.5,1.24,0.02,">1 nonsynonymous","V32L S43M D59L Y91C T140Y T201V",6
"lib2","SARS-CoV-2","ATGTGTAAACAACCAA",5,139.42,10.05,-0.79,0.02,2.91,1.08,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","ATGTGTAATAAAACGA",6,0,NA,NA,NA,NA,NA,NA,"stop","K56F A89V D112M F134* Y178I S200Y",6
"lib2","SARS-CoV-2","ATGTGTCAGAGTTTGT",1,7.02,6.29,-4.54,2,3,1.36,0.02,">1 nonsynonymous","V103P S113T L188H",3
"lib2","SARS-CoV-2","ATGTGTCCCCAAGTCA",3,17.82,8.74,-2.1,0.21,1.5,1.04,0.02,">1 nonsynonymous","Y50E C61T K199R",3
"lib2","SARS-CoV-2","ATGTGTGAACAACTAA",1,11.34,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","G74L G146P G172I",3
"lib2","SARS-CoV-2","ATGTGTGGATGTTTGG",5,64.45,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y93P Y121T Y143R",3
"lib2","SARS-CoV-2","ATGTGTTAAGCTAGTG",7,131.48,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","K56V T63V V71G D137L Y175M",5
"lib2","SARS-CoV-2","ATGTGTTATAACAATA",2,12.06,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","G86V A105R E141H T201L",4
"lib2","SARS-CoV-2","ATGTGTTTTCTAACAG",6,107.45,10.85,0.01,0.05,2.95,1.06,0,"1 nonsynonymous","Q163S",1
"lib2","SARS-CoV-2","ATGTTAAAAAGTGAAA",2,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136V L183R",2
"lib2","SARS-CoV-2","ATGTTAAAATCCGACA",5,126.99,10.13,-0.71,0.05,2.64,1.06,0,">1 nonsynonymous","F47L T100S",2
"lib2","SARS-CoV-2","ATGTTAAACCAGGGCC",5,1.04,NA,NA,NA,NA,NA,NA,"stop","L5Y L122*",2
"lib2","SARS-CoV-2","ATGTTAAACCGAAATA",6,127.22,10.6,-0.23,0.04,2.9,1.06,0,">1 nonsynonymous","A18T S184R P197L",3
"lib2","SARS-CoV-2","ATGTTAAACCTTGATA",1,37.69,6,-4.84,1.86,1.5,1.13,0.06,">1 nonsynonymous","T63N G86V N120S F134W",4
"lib2","SARS-CoV-2","ATGTTAAAGCAGACGC",3,104.7,10.28,-0.55,0.06,2.71,1.09,0,">1 nonsynonymous","G83V T140E",2
"lib2","SARS-CoV-2","ATGTTAAAGCTAACAT",4,0.29,NA,NA,NA,NA,NA,NA,"stop","S36* P54L",2
"lib2","SARS-CoV-2","ATGTTAAATACCCTAG",7,44.88,8.53,-2.3,0.1,2.01,1.14,0,">1 nonsynonymous","K26W N120F P169A",3
"lib2","SARS-CoV-2","ATGTTAAATTACTCGG",6,25.06,9.08,-1.76,0.17,2.11,1.07,0.01,">1 nonsynonymous","V77M T85I P149L F160Q",4
"lib2","SARS-CoV-2","ATGTTAAATTAGTGAG",9,89.94,10.37,-0.46,0.07,2.88,1.09,0,">1 nonsynonymous","F44I C61L",2
"lib2","SARS-CoV-2","ATGTTAACATCGAGAG",2,9.89,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","S129N Y143P Y175H",3
"lib2","SARS-CoV-2","ATGTTAACCTAGAAAC",1,46.85,10.85,0.01,0.05,2.84,1.16,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","ATGTTAACTCAAGCTG",10,95.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S41R G51H Y93R L122T T148P",5
"lib2","SARS-CoV-2","ATGTTAACTCAAGGCT",6,77.65,10.15,-0.68,0.06,2.9,1.08,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","ATGTTAAGACCCATCT",1,39.06,6.3,-4.54,0.53,1.5,1.15,0.02,">1 nonsynonymous","I142Y Q176W",2
"lib2","SARS-CoV-2","ATGTTAAGATGTTAAA",2,35.61,10.88,0.05,0.04,3,1.01,0,">1 nonsynonymous","G9S Y39V N64P",3
"lib2","SARS-CoV-2","ATGTTAAGCAATATTA",6,23.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F156Q R179F",2
"lib2","SARS-CoV-2","ATGTTAAGCATAAAGC",11,95.19,10.79,-0.05,0.03,2.95,1.07,0,">1 nonsynonymous","T85N D90T L188T",3
"lib2","SARS-CoV-2","ATGTTAAGCCGATTAT",6,50.95,10.05,-0.79,0.1,2.3,1.06,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","ATGTTAAGTAGAAGAT",3,13.39,10.83,-0.01,0.14,2.84,1.11,0.01,"1 nonsynonymous","S129K",1
"lib2","SARS-CoV-2","ATGTTAATAAAAACTT",9,23.49,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D90Y F99I A105R N151E",4
"lib2","SARS-CoV-2","ATGTTAATATGTGTAA",2,12.88,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","S41P V103R Q168P",3
"lib2","SARS-CoV-2","ATGTTAATCTAATTAC",7,65.19,9.03,-1.8,0.06,2.96,1.08,0,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","ATGTTAATGCTAACAA",9,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S41G G166C",3
"lib2","SARS-CoV-2","ATGTTACACCCTCAAA",9,98.87,9.29,-1.54,0.09,2.63,1.05,0,">1 nonsynonymous","N4G V115M T140G N151C K198R",5
"lib2","SARS-CoV-2","ATGTTACAGTCAACCA",12,179.52,10.51,-0.32,0.04,2.95,1.02,0,"1 nonsynonymous","F12M",1
"lib2","SARS-CoV-2","ATGTTACATTTTAACG",8,34.56,7.02,-3.81,0.45,1.5,1.26,0.06,">1 nonsynonymous","E76F I104C",2
"lib2","SARS-CoV-2","ATGTTACTCTTAATGA",9,179.15,10.23,-0.6,0.05,2.74,1.06,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","ATGTTACTTAATAATG",1,13.48,6.02,-4.81,0.45,3,1.06,0,">1 nonsynonymous","K114A L131G T148I",3
"lib2","SARS-CoV-2","ATGTTACTTATTTCCT",3,183.45,10.4,-0.43,0.05,2.82,1.09,0,">1 nonsynonymous","A14M T63S",2
"lib2","SARS-CoV-2","ATGTTAGAAGTCTAAG",4,23.36,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F8D Y175E",2
"lib2","SARS-CoV-2","ATGTTAGAATACTGAT",1,24.87,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","Y39T V65S W106Y F167Y G172Q",5
"lib2","SARS-CoV-2","ATGTTAGACGCATCTA",1,56.12,8.61,-2.23,0.12,2.43,1.1,0,">1 nonsynonymous","D97E S113V Y119S",3
"lib2","SARS-CoV-2","ATGTTAGCACGCCTAA",3,8.33,10.49,-0.35,0.12,2.81,1.16,0.01,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","ATGTTAGCTCTCAATG",6,55.77,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S43V V103L Q176N",3
"lib2","SARS-CoV-2","ATGTTAGTATACAAAC",7,275.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9L S36F Y119A P177S",4
"lib2","SARS-CoV-2","ATGTTAGTTACCTATT",1,36.06,10.5,-0.34,0.04,2.88,1.12,0,">1 nonsynonymous","D97S I104M",2
"lib2","SARS-CoV-2","ATGTTAGTTTCCAGCC",11,116.14,6,-4.84,2,1.5,1.37,0.04,">1 nonsynonymous","E10C D59P I88A A105N",4
"lib2","SARS-CoV-2","ATGTTATAAAAATATA",5,40.42,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K87I F99N",2
"lib2","SARS-CoV-2","ATGTTATAAAGTACTA",1,28.12,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A22H D112G R124L L162V V180Y",5
"lib2","SARS-CoV-2","ATGTTATAAGTACGCA",2,21.6,9.46,-1.37,0.2,2,1.04,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","ATGTTATACAAGTACT",12,4.97,NA,NA,NA,NA,NA,NA,"stop","Y123* R124S",2
"lib2","SARS-CoV-2","ATGTTATACTACCAGC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","A14C F44*",2
"lib2","SARS-CoV-2","ATGTTATCTCTAGACT",15,207.98,10.74,-0.09,0.03,2.94,1.08,0,">1 nonsynonymous","G83N Y91F",2
"lib2","SARS-CoV-2","ATGTTATTTTATCATG",9,189.13,10.26,-0.57,0.03,2.89,1.03,0,">1 nonsynonymous","Y35T D97S",2
"lib2","SARS-CoV-2","ATGTTCAAACTGACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37E K87R T100* Q144N",4
"lib2","SARS-CoV-2","ATGTTCAAAGCCACTG",1,13.23,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","W106R R127M G146T G166W",4
"lib2","SARS-CoV-2","ATGTTCAACTGACAAA",5,45.45,10.06,-0.78,0.12,2.21,1,0.01,"1 nonsynonymous","F17P",1
"lib2","SARS-CoV-2","ATGTTCAATACAAGTC",2,7.5,10.62,-0.22,0.08,2.9,1.1,0,"1 nonsynonymous","T3F",1
"lib2","SARS-CoV-2","ATGTTCAATGTATCCA",1,38.29,10.48,-0.35,0.06,2.88,1.09,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","ATGTTCACTACAAAAT",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A14L F47W T100Y F134G K199S",6
"lib2","SARS-CoV-2","ATGTTCACTCATCACA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A G51C T148M C150W",4
"lib2","SARS-CoV-2","ATGTTCATGGCGGTTG",5,71.86,8.8,-2.04,0.12,1.7,1.16,0.01,">1 nonsynonymous","T55Y P133M E141L Y178T",4
"lib2","SARS-CoV-2","ATGTTCCAGACGAAGG",6,1.28,NA,NA,NA,NA,NA,NA,"stop","Y66L K87T P169* G172P",4
"lib2","SARS-CoV-2","ATGTTCCATCATACGA",3,57.75,10.76,-0.08,0.04,2.99,1.03,0,"1 nonsynonymous","K198I",1
"lib2","SARS-CoV-2","ATGTTCCCTATCTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7G V11T A22L F44C S53* A105Q C150Y",7
"lib2","SARS-CoV-2","ATGTTCCGCTTCTATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N40I W106M Q144* G152I",4
"lib2","SARS-CoV-2","ATGTTCCGGGCACGGA",4,1.23,NA,NA,NA,NA,NA,NA,"stop","T15Y G116H P161*",3
"lib2","SARS-CoV-2","ATGTTCCGTACACGCG",11,138.08,10.61,-0.23,0.06,2.9,1.05,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","ATGTTCCTAAACACGA",3,39.07,10.81,-0.03,0.04,2.97,1.04,0,">1 nonsynonymous","N4S V37G",2
"lib2","SARS-CoV-2","ATGTTCCTAACCGTTG",14,103.04,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","R25W D68V A81P G86E S139Y",5
"lib2","SARS-CoV-2","ATGTTCCTCTTTTTAA",6,17.62,7.02,-3.81,0.32,1.62,1.14,0.02,">1 nonsynonymous","G51I E135L",2
"lib2","SARS-CoV-2","ATGTTCGAATGTCAAA",8,76,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6V G117V Y178M",3
"lib2","SARS-CoV-2","ATGTTCGACTACGCGT",10,222.02,6,-4.84,0.93,1.5,1.14,0.01,">1 nonsynonymous","G9Q Q84K Q176F",3
"lib2","SARS-CoV-2","ATGTTCGATAGGCCCA",3,21.86,10.86,0.02,0.08,3,1.01,0,">1 nonsynonymous","V37D L111Q",2
"lib2","SARS-CoV-2","ATGTTCGATCAAGATT",10,7.02,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T3H N13L F62M R78F A105L Q168K",6
"lib2","SARS-CoV-2","ATGTTCTAAGGCTATA",1,35.08,9.79,-1.04,0.06,2.9,1.08,0,">1 nonsynonymous","T15D Y119R",2
"lib2","SARS-CoV-2","ATGTTCTAGATTTGAA",6,150.24,10.68,-0.15,0.03,2.94,1.05,0,">1 nonsynonymous","S43W N151Y",2
"lib2","SARS-CoV-2","ATGTTCTTATAGCAAT",13,178.49,8.43,-2.41,0.09,2.03,1.09,0,">1 nonsynonymous","T100L N107L",2
"lib2","SARS-CoV-2","ATGTTCTTTAAAATAG",4,37.09,10.91,0.08,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTTCTTTACTGATG",8,71.96,10.87,0.03,0.04,2.95,1.07,0,">1 nonsynonymous","I2P T201I",2
"lib2","SARS-CoV-2","ATGTTGAATTATTGTA",5,12.24,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N1F N64Y N120I R127H T170H A192V",6
"lib2","SARS-CoV-2","ATGTTGACATAATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F D59A A105W T148L Q168S",5
"lib2","SARS-CoV-2","ATGTTGAGAAGTACAA",2,18.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6V D90S P96H V103L S129P E141P T201N",7
"lib2","SARS-CoV-2","ATGTTGATACTGGTAG",1,33.57,8.87,-1.96,0.09,2.96,1.08,0,">1 nonsynonymous","A22L L125R",2
"lib2","SARS-CoV-2","ATGTTGATCCTACTAA",1,8,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","F8L K87H D97P W106R F134V G166R",6
"lib2","SARS-CoV-2","ATGTTGATGACTGTCC",2,1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATGTTGCGATTAGTAG",2,1.73,NA,NA,NA,NA,NA,NA,"stop","N120* S139W N151I Q163F",4
"lib2","SARS-CoV-2","ATGTTGCGCTAGAAAG",3,5.07,6,-4.84,2,3,1.09,0.04,">1 nonsynonymous","Y35A F99C G117M N151S S164C P177V V182C",7
"lib2","SARS-CoV-2","ATGTTGCTCGGCACAG",5,32.68,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","V182E",1
"lib2","SARS-CoV-2","ATGTTGCTGAAACAAC",3,0.04,NA,NA,NA,NA,NA,NA,"stop","F8I R27D K56S N171Y R179*",5
"lib2","SARS-CoV-2","ATGTTGGAATTAGGTT",8,73.31,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I88F F99H N120V C158R G174E",5
"lib2","SARS-CoV-2","ATGTTGGATTAGTATG",5,165.73,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","I88R Q176S",2
"lib2","SARS-CoV-2","ATGTTGGTATAAGGGA",6,26.65,8.84,-1.99,0.2,1.5,1.02,0.02,"1 nonsynonymous","W23G",1
"lib2","SARS-CoV-2","ATGTTGTAAGGAAAGA",4,56.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27K V77Q Q84D L122R A145L V180G",6
"lib2","SARS-CoV-2","ATGTTGTGACCTTAGG",2,14.26,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","N40M A89R W106L V153S S200L",5
"lib2","SARS-CoV-2","ATGTTGTTACTAAGTT",5,32,10.87,0.04,0.11,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTTTAAAAAAACCG",9,59.58,6,-4.84,2,3,1.25,0,">1 nonsynonymous","L38R S45N L95A N171S A190V",5
"lib2","SARS-CoV-2","ATGTTTAAAGCTAACA",1,29.71,9.46,-1.37,0.1,1.89,1.04,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","ATGTTTACAAAATCAA",6,56.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64Y A105N Y123W C158L",4
"lib2","SARS-CoV-2","ATGTTTACAGCGCAAC",2,22.76,10.77,-0.06,0.06,2.92,1.08,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","ATGTTTAGCATAACTA",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R Y123W N130Y V182D",4
"lib2","SARS-CoV-2","ATGTTTATCTTACAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I T15K I80A",3
"lib2","SARS-CoV-2","ATGTTTATGGTTAATA",15,229.99,10.7,-0.13,0.03,2.94,1.07,0,">1 nonsynonymous","A22C N120Q",2
"lib2","SARS-CoV-2","ATGTTTATTAAACCAA",1,27.96,9.85,-0.99,0.05,2.95,1.01,0,">1 nonsynonymous","A33H T55A T170A",3
"lib2","SARS-CoV-2","ATGTTTCAAAAACTTA",4,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H V103H G146Y",3
"lib2","SARS-CoV-2","ATGTTTCAAGTGATAT",8,0.37,NA,NA,NA,NA,NA,NA,"stop","F44* K56S P96K",3
"lib2","SARS-CoV-2","ATGTTTCATAGCCACT",11,92.36,10.72,-0.11,0.04,2.92,1.1,0,"1 nonsynonymous","P7A",1
"lib2","SARS-CoV-2","ATGTTTCCACTCCTTG",3,28.43,10.68,-0.15,0.06,3,1.03,0,">1 nonsynonymous","T3L T140D",2
"lib2","SARS-CoV-2","ATGTTTCGGAAAATAT",8,69.74,9.52,-1.31,0.33,1.5,1,0.05,">1 nonsynonymous","F12Y W106K",2
"lib2","SARS-CoV-2","ATGTTTCTCCCAACAA",1,68.54,10.72,-0.12,0.07,2.77,1.25,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","ATGTTTCTTAACTGCA",5,47.45,10.22,-0.62,0.06,3,1.03,0,">1 nonsynonymous","A105T L122T E154L",3
"lib2","SARS-CoV-2","ATGTTTCTTTGATATT",8,42.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V20E D112E R179S",3
"lib2","SARS-CoV-2","ATGTTTGAGAAACACC",2,9.34,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","Y119S D137R P177V S200L",4
"lib2","SARS-CoV-2","ATGTTTGCGATAATGG",6,12.66,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V11D L60D Y91V C158S G166F",5
"lib2","SARS-CoV-2","ATGTTTGCTATAGTAT",3,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y P82R N118L L125A",4
"lib2","SARS-CoV-2","ATGTTTGGCACGCTGG",6,19.47,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14I F17L A33C F99S N110R Y175I",6
"lib2","SARS-CoV-2","ATGTTTGGGAAAGTTA",3,31.94,8.03,-2.81,0.23,1.5,1.01,0.02,"1 nonsynonymous","L131G",1
"lib2","SARS-CoV-2","ATGTTTGGTATAGAAA",1,17.07,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","K56V G101C",2
"lib2","SARS-CoV-2","ATGTTTGTGACGGTTA",16,286.85,10.26,-0.57,0.02,2.89,1.03,0,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","ATGTTTTAGCTAGGAC",13,90.13,6,-4.84,1.06,1.5,1.22,0.01,">1 nonsynonymous","T3D R16F I104T P133K",4
"lib2","SARS-CoV-2","ATGTTTTCAAAACTCC",3,89.79,10.89,0.05,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATGTTTTCAAAGATAC",12,248.76,10.19,-0.65,0.02,2.92,1.03,0,">1 nonsynonymous","C6H R16S",2
"lib2","SARS-CoV-2","ATGTTTTCGTAGTTCG",3,27.86,10.72,-0.12,0.02,3,1.01,0,"1 nonsynonymous","Y39N",1
"lib2","SARS-CoV-2","ATGTTTTGATAGTTCT",2,18.87,6.21,-4.63,0.95,1.5,1.2,0.02,"1 nonsynonymous","C49G",1
"lib2","SARS-CoV-2","ATGTTTTTAATAATCA",14,211.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N120P N157Y",2
"lib2","SARS-CoV-2","ATGTTTTTGGAACCAT",3,54.14,9.82,-1.01,0.09,2.23,1.03,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","ATTAAAAAAAACATAG",5,62.15,10.95,0.12,0.04,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAAAAAATAATCA",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58G Y123V N130V",3
"lib2","SARS-CoV-2","ATTAAAAACAATAATA",7,46.57,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V65E S69K A89Y G101S Y119C T201Q",6
"lib2","SARS-CoV-2","ATTAAAAACAATTCCT",1,35.56,10.19,-0.64,0.07,2.93,1.03,0,">1 nonsynonymous","F8I L60R C195G",3
"lib2","SARS-CoV-2","ATTAAAAACACCTATA",3,33.97,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","V20G I72F N120P V181D",4
"lib2","SARS-CoV-2","ATTAAAAACAGCGTTT",2,41.86,10.16,-0.68,0.06,2.76,1.1,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","ATTAAAAACATCTTAA",6,1.06,NA,NA,NA,NA,NA,NA,"stop","K87Q D97V N110G E135*",4
"lib2","SARS-CoV-2","ATTAAAAACCCAAAAA",6,40.34,8.81,-2.02,0.13,2.59,1.11,0,">1 nonsynonymous","L111A N118F K199I",3
"lib2","SARS-CoV-2","ATTAAAAACGAGAATG",7,13.78,9.44,-1.4,0.16,2.08,1.07,0.01,">1 nonsynonymous","D34H V173P",2
"lib2","SARS-CoV-2","ATTAAAAACTGCATAT",11,93.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V77E D98S V173T",3
"lib2","SARS-CoV-2","ATTAAAAACTTTATGA",10,47.17,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y50K T85S D98T W106L S139L Y159Q",6
"lib2","SARS-CoV-2","ATTAAAAAGACCGCAG",3,83.2,10.39,-0.44,0.04,2.96,1.06,0,">1 nonsynonymous","V37L G51H K87F T148S",4
"lib2","SARS-CoV-2","ATTAAAAAGCCTAATC",6,7.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I V52L D90L Y123N G155L",5
"lib2","SARS-CoV-2","ATTAAAAATAGGACTT",3,18.07,6,-4.84,2,1.5,1.09,0.02,"1 nonsynonymous","I72F",1
"lib2","SARS-CoV-2","ATTAAAAATGTAATAA",16,254.75,10.28,-0.55,0.04,2.76,1.04,0,">1 nonsynonymous","A81K T140R L187V",3
"lib2","SARS-CoV-2","ATTAAAACGTTATCCC",1,61.84,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","G9P S29G A67D A105L Y121H I142S",6
"lib2","SARS-CoV-2","ATTAAAACTACTAATT",11,59.75,10.95,0.11,0.06,2.99,1.02,0,">1 nonsynonymous","Y39L T100Y",2
"lib2","SARS-CoV-2","ATTAAAACTGAAGGGC",12,156.17,10.84,0,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAAAGAGGAAAAG",1,40.6,8.69,-2.14,0.06,2.46,1.14,0,">1 nonsynonymous","A42E D112V Y175F",3
"lib2","SARS-CoV-2","ATTAAAAGCAGCAACA",9,70.99,10.87,0.04,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAAAGCTCCCATC",6,139.82,10.21,-0.62,0.06,2.56,1.02,0,"1 nonsynonymous","A81N",1
"lib2","SARS-CoV-2","ATTAAAAGGATCGCTG",12,47.27,7.09,-3.75,0.31,1.5,1.07,0.03,">1 nonsynonymous","A14R G86E S200F",3
"lib2","SARS-CoV-2","ATTAAAAGTAGCCCCA",5,128.61,10.47,-0.37,0.05,2.92,1.05,0,">1 nonsynonymous","T100A S147L",2
"lib2","SARS-CoV-2","ATTAAAAGTGGTGGCC",3,27.39,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V11N F99D F160L Q176L",4
"lib2","SARS-CoV-2","ATTAAAATAAAGAAAG",9,95.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y39T T85R P96S R124V",4
"lib2","SARS-CoV-2","ATTAAAATACACTACT",4,36.2,10.81,-0.03,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAAATAGTATAGA",6,32.92,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V103G Y121I T148S N157S",4
"lib2","SARS-CoV-2","ATTAAAATATAATTGA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","L60* G86N",2
"lib2","SARS-CoV-2","ATTAAAATGACAAGAA",3,1.5,NA,NA,NA,NA,NA,NA,"stop","I88* D97L N130V E141Y V173I",5
"lib2","SARS-CoV-2","ATTAAAATGTATTAGA",2,15.32,9.69,-1.14,0.33,1.5,1,0.06,">1 nonsynonymous","K48N S69L D97M",3
"lib2","SARS-CoV-2","ATTAAAATGTGAAACG",16,92.79,6,-4.84,2,3,1.19,0,"1 nonsynonymous","G101P",1
"lib2","SARS-CoV-2","ATTAAAATTAAACTAT",11,341.81,10.11,-0.72,0.04,2.77,1.05,0,">1 nonsynonymous","S41D K56V K114C S129L",4
"lib2","SARS-CoV-2","ATTAAAATTAGCAAAA",1,31.04,10.19,-0.64,0.08,2.89,1.13,0,">1 nonsynonymous","P54M G174W",2
"lib2","SARS-CoV-2","ATTAAAATTGGGAATT",3,21.35,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V32Y R78M G83T N92D A105T",5
"lib2","SARS-CoV-2","ATTAAAATTGGTACTT",10,202.19,10.69,-0.15,0.02,2.91,1.09,0,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","ATTAAAATTGTTTTTG",4,60.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A22T N118T F126P C158D",4
"lib2","SARS-CoV-2","ATTAAAATTTTAATCC",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22P S45R T201P",3
"lib2","SARS-CoV-2","ATTAAACAAACCAACC",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q R127P",2
"lib2","SARS-CoV-2","ATTAAACAACACAACG",7,16.58,8.76,-2.08,0.19,1.5,1.18,0.02,">1 nonsynonymous","R27K R127L E141L",3
"lib2","SARS-CoV-2","ATTAAACCGTTATTAC",2,12.37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G86F L95P K132Y",3
"lib2","SARS-CoV-2","ATTAAACCTGTGAGCG",3,14.35,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K26P C49W G74S G116L Y121L",5
"lib2","SARS-CoV-2","ATTAAACGAAAACTTT",4,0.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","ATTAAACGACAAAGAA",16,41.98,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A42L S113K S139W P149E",4
"lib2","SARS-CoV-2","ATTAAACGCCTCATAT",11,179.54,6.24,-4.6,0.81,1.5,1.25,0.03,">1 nonsynonymous","S29W F47L T63R T100P",4
"lib2","SARS-CoV-2","ATTAAACGCGGGGAAC",6,59.92,10.51,-0.32,0.04,2.92,1.09,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","ATTAAACGGAATCAGG",10,108,10.88,0.04,0.03,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAACGTCTAGCAT",5,1.32,NA,NA,NA,NA,NA,NA,"stop","G9P S36T C49Y K56* I88Q",5
"lib2","SARS-CoV-2","ATTAAACTAATAAGCG",1,6.8,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","C6L L95P N107E",3
"lib2","SARS-CoV-2","ATTAAACTAGATTGTC",12,221.35,10.63,-0.2,0.03,2.91,1.09,0,">1 nonsynonymous","F8L F47V",2
"lib2","SARS-CoV-2","ATTAAACTAGGAAACC",5,49.2,10.81,-0.02,0.04,3,1.03,0,">1 nonsynonymous","K56Q A192G",2
"lib2","SARS-CoV-2","ATTAAACTCAAAGAAC",1,4.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95N",1
"lib2","SARS-CoV-2","ATTAAACTCCAATTGT",3,50,10.57,-0.27,0.06,2.9,1.07,0,">1 nonsynonymous","Q84Y V115P L188H K199S",4
"lib2","SARS-CoV-2","ATTAAACTCCCCAAAA",3,16.33,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N58T Y66L Y91A Y143R T201A",5
"lib2","SARS-CoV-2","ATTAAACTTAATGACT",7,107.5,9.57,-1.26,0.12,1.87,1.09,0.01,">1 nonsynonymous","L38T N110I",2
"lib2","SARS-CoV-2","ATTAAACTTTCGTTAA",1,12.79,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","L95E Y121R P169T",3
"lib2","SARS-CoV-2","ATTAAAGAATATATAA",4,42.93,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","L57Y Y165C",2
"lib2","SARS-CoV-2","ATTAAAGACACCGGCC",4,1.42,NA,NA,NA,NA,NA,NA,"stop","W23M T100* P161N",3
"lib2","SARS-CoV-2","ATTAAAGACATATGGG",4,58.86,10.06,-0.77,0.06,2.42,1,0,">1 nonsynonymous","E76D P96T L122M",3
"lib2","SARS-CoV-2","ATTAAAGACCCATTTT",1,32.23,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","P169Y G172D",2
"lib2","SARS-CoV-2","ATTAAAGACCCTTACA",6,33.65,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","V20H",1
"lib2","SARS-CoV-2","ATTAAAGAGTATTTAC",13,97.51,6,-4.84,2,3,1.19,0,">1 nonsynonymous","K26R F44M G74R D90T G166F",5
"lib2","SARS-CoV-2","ATTAAAGCAACGCAGT",9,46.46,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C61Y N92P W106V",3
"lib2","SARS-CoV-2","ATTAAAGCACCATACA",7,40.63,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T63C G86R I104M G116S",4
"lib2","SARS-CoV-2","ATTAAAGCCGACAAAA",2,28.08,6,-4.84,1.77,1.5,1.1,0.01,">1 nonsynonymous","S41L C61S A89C N157L",4
"lib2","SARS-CoV-2","ATTAAAGCCGCTAACT",6,179.05,9.95,-0.89,0.06,2.48,1.05,0,">1 nonsynonymous","N13C N64A K132T",3
"lib2","SARS-CoV-2","ATTAAAGCTAATGTAG",2,16.88,6,-4.84,0.45,3,1.19,0.01,">1 nonsynonymous","E10W T46I F99Y",3
"lib2","SARS-CoV-2","ATTAAAGGAGCGCAAA",1,11.5,6.04,-4.8,1.34,1.5,1.12,0.05,">1 nonsynonymous","A33S I104W Y119C E154V T170I Y175C",6
"lib2","SARS-CoV-2","ATTAAAGGATCCAGGT",4,33.1,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","I88N L95D N130D S139L",4
"lib2","SARS-CoV-2","ATTAAAGGGACTTATA",1,28.06,10,-0.84,0.05,2.75,1.19,0,">1 nonsynonymous","S45V C61H",2
"lib2","SARS-CoV-2","ATTAAAGGTGAATCCA",8,168.1,8.26,-2.58,0.11,2.3,1.06,0.01,">1 nonsynonymous","G51Y Y119H V173D",3
"lib2","SARS-CoV-2","ATTAAAGGTGACCAGT",2,34.48,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A22T V37D K48L G86F E135H",5
"lib2","SARS-CoV-2","ATTAAAGTAATAATTT",2,10.69,9.29,-1.55,0.29,1.6,1.08,0.05,">1 nonsynonymous","A14G Y91Q",2
"lib2","SARS-CoV-2","ATTAAAGTACAGATAG",8,112.26,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91R C150T",2
"lib2","SARS-CoV-2","ATTAAAGTACGTATAA",6,9.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90R V103N G146M",3
"lib2","SARS-CoV-2","ATTAAAGTCTTTAAAG",3,7.85,6.19,-4.65,2,1.5,1.06,0.02,">1 nonsynonymous","A33L G74R G101A",3
"lib2","SARS-CoV-2","ATTAAAGTGGTAATGC",5,4.24,NA,NA,NA,NA,NA,NA,"stop","K48V L60W V71G S129V Q176*",5
"lib2","SARS-CoV-2","ATTAAAGTTAAAGAAT",14,223.46,10.23,-0.61,0.02,2.92,1.07,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","ATTAAAGTTATGGGCC",5,39.46,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86V N110C",2
"lib2","SARS-CoV-2","ATTAAATAAAAGGAGA",8,107.91,9.96,-0.87,0.06,2.27,1.03,0,">1 nonsynonymous","Y21L A42G",2
"lib2","SARS-CoV-2","ATTAAATAACATCCTT",7,28.92,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12G V71H I142V",3
"lib2","SARS-CoV-2","ATTAAATAATCCGTGA",2,44.9,10.85,0.01,0.05,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAATAATGTTCGG",9,21.13,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15G T55A G86N N120F",4
"lib2","SARS-CoV-2","ATTAAATACAAGACAG",2,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S W106L G172D",3
"lib2","SARS-CoV-2","ATTAAATATACGATCG",2,33.92,10.71,-0.13,0.07,2.8,1.09,0,"1 nonsynonymous","G116N",1
"lib2","SARS-CoV-2","ATTAAATCAATTTGCC",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S A42L T46D A105L L131S Q176S",6
"lib2","SARS-CoV-2","ATTAAATCATCATCCT",3,77.92,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","T3L L60T I88S P197N",4
"lib2","SARS-CoV-2","ATTAAATGACAATAAT",1,8.59,10.82,-0.01,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAATGTGACTATA",4,74.82,10.46,-0.38,0.03,2.93,1.04,0,">1 nonsynonymous","K87Y Y123L",2
"lib2","SARS-CoV-2","ATTAAATGTTACTCCT",2,68.81,10.64,-0.19,0.03,2.93,1.03,0,"1 nonsynonymous","N4I",1
"lib2","SARS-CoV-2","ATTAAATTAAAGTAGA",6,1.27,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib2","SARS-CoV-2","ATTAAATTAACGAAAA",5,74.96,10.77,-0.06,0.02,2.97,1.03,0,"1 nonsynonymous","N4M",1
"lib2","SARS-CoV-2","ATTAAATTCAACAAGG",4,23.36,8.35,-2.49,0.19,1.53,1.1,0.03,">1 nonsynonymous","P82T D90S",2
"lib2","SARS-CoV-2","ATTAAATTCCACACAC",4,53.41,9.75,-1.09,0.13,2.32,1.1,0.01,">1 nonsynonymous","A14C G152L",2
"lib2","SARS-CoV-2","ATTAAATTCCAGAATT",4,85.9,10.96,0.13,0.05,2.87,1.12,0,"1 nonsynonymous","Q163F",1
"lib2","SARS-CoV-2","ATTAAATTTAAAACTA",10,65.79,7.83,-3.01,0.38,1.5,1,0.04,">1 nonsynonymous","F17L P82G",2
"lib2","SARS-CoV-2","ATTAAATTTAGAGTAT",12,34.55,9.51,-1.32,0.22,1.5,1,0.02,">1 nonsynonymous","D34L N107K Y123F",3
"lib2","SARS-CoV-2","ATTAACAAAAAGAGGA",7,40.79,9.78,-1.06,0.07,2.17,1.03,0,">1 nonsynonymous","Y35N T85F",2
"lib2","SARS-CoV-2","ATTAACAAAGCAACGC",6,53.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8L N24R V32E N40Y I72V D112G R124T V173A",8
"lib2","SARS-CoV-2","ATTAACAAAGTTATAT",4,22.2,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G9A D68P T100L K132P E141S E154S",6
"lib2","SARS-CoV-2","ATTAACAATGCTAAGA",8,108.38,8.8,-2.03,0.09,2.85,1.07,0,">1 nonsynonymous","F62E G166T",2
"lib2","SARS-CoV-2","ATTAACACCCTTGAGT",1,9.09,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","T15I T55M A89L",3
"lib2","SARS-CoV-2","ATTAACACCTACTAAA",8,67.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5I Y35N N64L V71P C158M",5
"lib2","SARS-CoV-2","ATTAACACGTTCATAG",6,62.14,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F44R A89F",2
"lib2","SARS-CoV-2","ATTAACACTAATAGGC",2,15.08,10.37,-0.47,0.07,2.92,1.06,0,">1 nonsynonymous","R27Q N130W",2
"lib2","SARS-CoV-2","ATTAACAGAACATTAC",2,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98L E154Y",2
"lib2","SARS-CoV-2","ATTAACATAGAACGCT",10,134,10.85,0.02,0.03,2.97,1.04,0,">1 nonsynonymous","T3S L122S",2
"lib2","SARS-CoV-2","ATTAACATCACCCCAC",2,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E E135C",2
"lib2","SARS-CoV-2","ATTAACATTCTTGGTC",2,7.31,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A33V T100P F134Y Q176S",4
"lib2","SARS-CoV-2","ATTAACATTTGAGAGG",2,21.39,6.39,-4.44,0.78,1.5,1.14,0.05,">1 nonsynonymous","A105R G174F",2
"lib2","SARS-CoV-2","ATTAACCAACACTTCG",8,96.07,10.81,-0.03,0.06,2.9,1.07,0,">1 nonsynonymous","T85R T201C",2
"lib2","SARS-CoV-2","ATTAACCAAGTGGTAG",2,8.05,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A42C Y66F T148V Q163H L183T",5
"lib2","SARS-CoV-2","ATTAACCAATTCCTGA",1,6,10.45,-0.39,0.11,3,1.01,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","ATTAACCACTTTATAC",5,6.82,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","E10I F44N V65S F70L",4
"lib2","SARS-CoV-2","ATTAACCAGACTATAA",7,43.4,6.2,-4.64,0.43,2.14,1.13,0.01,"1 nonsynonymous","F167N",1
"lib2","SARS-CoV-2","ATTAACCCATTAAACC",5,57.36,10.54,-0.3,0.04,2.94,1.08,0,">1 nonsynonymous","I28L S184L",2
"lib2","SARS-CoV-2","ATTAACCCCAAATTGG",6,11.35,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S29P T55G L183N S200C",4
"lib2","SARS-CoV-2","ATTAACCCGTATAATC",3,12.24,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C49R Y119R N130R",3
"lib2","SARS-CoV-2","ATTAACCCTTTAACTA",5,0.16,NA,NA,NA,NA,NA,NA,"stop","F8* A89G P149F",3
"lib2","SARS-CoV-2","ATTAACCGCCAAATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* A22G K94M",3
"lib2","SARS-CoV-2","ATTAACCGGCACTAAA",8,95.68,8.62,-2.21,0.11,2.22,1.09,0,">1 nonsynonymous","Y121M Q144T E154L",3
"lib2","SARS-CoV-2","ATTAACCTACACATAA",2,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50Q G155I V182R",3
"lib2","SARS-CoV-2","ATTAACCTCGAGCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119N L131W S147G",3
"lib2","SARS-CoV-2","ATTAACCTCGTCCTTG",6,62.81,9.48,-1.35,0.08,2.37,1.11,0,">1 nonsynonymous","T85A F134S V173P",3
"lib2","SARS-CoV-2","ATTAACGAAATAACCT",10,87.11,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55G S108D E141A G174V",4
"lib2","SARS-CoV-2","ATTAACGAAGCTGTCG",13,75.73,9.67,-1.17,0.1,1.89,1.08,0,">1 nonsynonymous","F47S D97L T140S",3
"lib2","SARS-CoV-2","ATTAACGACGAGCTTA",4,128.55,9.41,-1.43,0.09,2.58,1.06,0,">1 nonsynonymous","L38V Y143M",2
"lib2","SARS-CoV-2","ATTAACGGACCTTCGT",8,5.7,NA,NA,NA,NA,NA,NA,"stop","A14S C61* F62E E76R P149A R179Y",6
"lib2","SARS-CoV-2","ATTAACGGAGCATTCC",7,74.23,11.09,0.25,0.05,3,1.02,0,">1 nonsynonymous","T55I Q168H",2
"lib2","SARS-CoV-2","ATTAACGGAGTCATAT",1,50.94,10.06,-0.78,0.06,2.89,1.09,0,">1 nonsynonymous","C6G R16K I72L",3
"lib2","SARS-CoV-2","ATTAACGGCATATAAT",5,12.52,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","S41L K48D L57K V103S Q168L",5
"lib2","SARS-CoV-2","ATTAACTAAAATGCGG",3,84.57,10.38,-0.45,0.04,2.89,1.07,0,"1 nonsynonymous","F134D",1
"lib2","SARS-CoV-2","ATTAACTAACAAATAA",2,11.31,10.8,-0.03,0.08,2.89,1.13,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","ATTAACTAACTAGAGT",10,94.36,9.85,-0.99,0.04,2.97,1.02,0,">1 nonsynonymous","D90E L125A A145T",3
"lib2","SARS-CoV-2","ATTAACTACGAACTCC",8,122.11,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89Y N120L Y123S C150N",4
"lib2","SARS-CoV-2","ATTAACTAGGGTTCGA",9,118.95,10.9,0.07,0.07,2.89,1.13,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","ATTAACTATATATATG",2,66.32,10.87,0.03,0.05,2.88,1.12,0,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","ATTAACTCAACTCCCA",6,35.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L C49L L95T",3
"lib2","SARS-CoV-2","ATTAACTCCAAAGACG",4,18.74,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","R73P V103D N110V C150A",4
"lib2","SARS-CoV-2","ATTAACTCTGTATAGT",8,68.15,9.52,-1.32,0.09,1.84,1.11,0,">1 nonsynonymous","Y91K D98W",2
"lib2","SARS-CoV-2","ATTAACTCTTTACATT",4,210.76,10.81,-0.02,0.05,2.8,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAACTGTGAACCTT",6,120.6,10.37,-0.47,0.05,2.91,1.08,0,">1 nonsynonymous","P7L T63K",2
"lib2","SARS-CoV-2","ATTAAGAAAAAACCTT",4,52.26,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33H A42G G86D G155T V181P",5
"lib2","SARS-CoV-2","ATTAAGAAATACACAG",36,154.8,6,-4.84,2,3,1.21,0,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","ATTAAGAAATTCCCAG",7,18.65,6.18,-4.66,0.94,1.5,1.29,0.03,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","ATTAAGAACCATAATT",7,16.32,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5G P82W V115M L162R K199Q",5
"lib2","SARS-CoV-2","ATTAAGAAGCGTCTCC",3,16.79,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","K87S G116R C150Y",3
"lib2","SARS-CoV-2","ATTAAGAATCGACGGG",1,28.37,8.06,-2.78,0.38,1.5,1.13,0.07,">1 nonsynonymous","T3K V32K C61H D137P",4
"lib2","SARS-CoV-2","ATTAAGACTAGCCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G W106N N157T L187Y",4
"lib2","SARS-CoV-2","ATTAAGACTGCTCGCT",5,38.72,9.74,-1.1,0.09,2.13,1.05,0,">1 nonsynonymous","I104Q N130K",2
"lib2","SARS-CoV-2","ATTAAGAGAGCAGGCT",5,62.62,10.08,-0.75,0.06,2.59,1.04,0,">1 nonsynonymous","S45E T63L D90F",3
"lib2","SARS-CoV-2","ATTAAGAGGTCAAAGG",16,115.29,6,-4.84,1.88,1.5,1.22,0.02,">1 nonsynonymous","D59L P82S V181L",3
"lib2","SARS-CoV-2","ATTAAGAGTATATCAG",2,26.52,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50C Y143K",2
"lib2","SARS-CoV-2","ATTAAGATATCTTTTG",1,9.74,10.69,-0.14,0.17,2.9,1,0.01,">1 nonsynonymous","Y35G L122S",2
"lib2","SARS-CoV-2","ATTAAGATCAGTTATG",3,51.36,10.44,-0.4,0.05,2.92,1.07,0,">1 nonsynonymous","L5K F44P",2
"lib2","SARS-CoV-2","ATTAAGCAAACCATAA",2,25.19,9.87,-0.97,0.09,2.25,1.06,0.01,">1 nonsynonymous","K56M D98F S129L I138T G152N",5
"lib2","SARS-CoV-2","ATTAAGCAAAGATGCC",7,107.98,6.28,-4.56,0.49,1.5,1.19,0.01,">1 nonsynonymous","Y39Q D97V F185D",3
"lib2","SARS-CoV-2","ATTAAGCAATAGCCCA",7,104.12,6,-4.84,2,3,1.22,0,"1 nonsynonymous","V20K",1
"lib2","SARS-CoV-2","ATTAAGCCAAATTCAT",27,25.49,NA,NA,NA,NA,NA,NA,"stop","V37* R127S",2
"lib2","SARS-CoV-2","ATTAAGCCACGTATCC",2,12.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50V D68E G86S",3
"lib2","SARS-CoV-2","ATTAAGCCACTCACAA",9,7.72,10.6,-0.24,0.22,2.76,1.03,0.01,">1 nonsynonymous","A105S G166A",2
"lib2","SARS-CoV-2","ATTAAGCGCATAGACT",9,78.76,10.8,-0.03,0.05,2.89,1.12,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","ATTAAGCTATTATCGG",11,112.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C31E K87Y F99I C150M G172A",5
"lib2","SARS-CoV-2","ATTAAGCTTACCAAAG",5,10.21,8.32,-2.52,0.27,1.68,1.14,0.03,">1 nonsynonymous","N64I W106L",2
"lib2","SARS-CoV-2","ATTAAGCTTATTCAGA",4,87.24,9.84,-0.99,0.09,2.23,1.05,0,">1 nonsynonymous","W106A S147T C195E",3
"lib2","SARS-CoV-2","ATTAAGGAAAATAATC",6,45.77,8.85,-1.99,0.18,1.68,1.09,0.02,">1 nonsynonymous","F62P P96M",2
"lib2","SARS-CoV-2","ATTAAGGAATCCTGTT",2,18.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S45T G51A D90V A105Y D112L G196W",6
"lib2","SARS-CoV-2","ATTAAGGCAGTAAACA",5,51.48,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49Q L60T R136Q L188W S200K",5
"lib2","SARS-CoV-2","ATTAAGGGAAAATATT",10,54.89,8.99,-1.85,0.17,1.66,1.13,0.01,">1 nonsynonymous","V11L P54T P133R",3
"lib2","SARS-CoV-2","ATTAAGGGAATTTCGC",16,150.56,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C49D T55A S69K Y93F Y165M",5
"lib2","SARS-CoV-2","ATTAAGGTAAGTATAC",5,35.14,10.7,-0.13,0.07,2.92,1.09,0,">1 nonsynonymous","T15P K48R L60I",3
"lib2","SARS-CoV-2","ATTAAGGTCTTCCTAG",7,28.85,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","A89L P96M G174L",3
"lib2","SARS-CoV-2","ATTAAGGTGGCCCATG",5,46.59,10.81,-0.02,0.07,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTAAGGTTTAAGAAG",5,65.65,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S45T F99C R127F S164L T170S",5
"lib2","SARS-CoV-2","ATTAAGTAACTAAATC",1,17.49,7.93,-2.91,0.33,1.73,1.12,0.03,">1 nonsynonymous","N4F Y165I",2
"lib2","SARS-CoV-2","ATTAAGTAGTTCGAGT",3,20.45,10.74,-0.1,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAAGTCCACAAGGA",3,42.12,9.43,-1.41,0.1,2.59,1.16,0,">1 nonsynonymous","G9P A22E N58C V65I G174S",5
"lib2","SARS-CoV-2","ATTAAGTGAAAGTGAA",7,15.04,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T15Y S45M G101R T201W",4
"lib2","SARS-CoV-2","ATTAAGTGATAGCTCA",2,36.25,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","W23K Y35P K87L F99G",4
"lib2","SARS-CoV-2","ATTAAGTGCAGCACAC",11,60.92,6.24,-4.59,0.67,1.5,1.13,0.02,">1 nonsynonymous","K94T L95V",2
"lib2","SARS-CoV-2","ATTAAGTGGAACGACT",6,72.21,9.13,-1.71,0.11,1.71,1.09,0,">1 nonsynonymous","V11A V32A A105T",3
"lib2","SARS-CoV-2","ATTAAGTTAAGCCCGG",3,16.38,7.64,-3.19,0.35,1.79,1.18,0.05,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","ATTAAGTTACACCATT",1,34.64,10.32,-0.51,0.07,2.92,1,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","ATTAAGTTTATTTGAC",3,43.81,10.85,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAATAAACGAATGA",10,188.55,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F44K G86M N107F V180G",4
"lib2","SARS-CoV-2","ATTAATAAACTGAGAA",11,5.86,10.49,-0.34,0.26,2.58,1.27,0.01,">1 nonsynonymous","S43Y L95H S147N",3
"lib2","SARS-CoV-2","ATTAATAAATAGAGAT",4,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C K48E A89I I104L C158Y L162R",6
"lib2","SARS-CoV-2","ATTAATAACCAATAGA",2,13.73,7.9,-2.94,0.15,1.7,1.07,0.01,">1 nonsynonymous","F12S Q84F",2
"lib2","SARS-CoV-2","ATTAATAATATCTGGT",1,47.62,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9R S53Y L60P V115M K128I F134H P149S",7
"lib2","SARS-CoV-2","ATTAATAATGGTTTGA",2,16.64,7.96,-2.87,0.06,1.99,1.03,0,">1 nonsynonymous","S19Q N171G",2
"lib2","SARS-CoV-2","ATTAATACACATATCT",7,87.33,10.58,-0.26,0.04,2.9,1.11,0,">1 nonsynonymous","V37R T63H S129R L162I",4
"lib2","SARS-CoV-2","ATTAATACCTTGTTAA",6,1.9,NA,NA,NA,NA,NA,NA,"stop","D34F K87N N110* G146W",4
"lib2","SARS-CoV-2","ATTAATACCTTTTAAA",5,47.55,10.3,-0.53,0.03,2.92,1.06,0,">1 nonsynonymous","L60E N151I",2
"lib2","SARS-CoV-2","ATTAATACGCTGCGTT",10,74.39,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K26P D34E G83Y W106L L122S",5
"lib2","SARS-CoV-2","ATTAATACTGTTTATA",2,1.19,NA,NA,NA,NA,NA,NA,"stop","K87T D90C C102* Q168M",4
"lib2","SARS-CoV-2","ATTAATAGCATTAAAA",3,209.44,10.43,-0.41,0.04,2.88,1.07,0,">1 nonsynonymous","A42T L95V V103I",3
"lib2","SARS-CoV-2","ATTAATAGGAAAGACG",1,17.71,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R25I L183G",2
"lib2","SARS-CoV-2","ATTAATAGGTTAAACA",2,40.41,10.6,-0.24,0.05,2.98,1.03,0,">1 nonsynonymous","K128L T201N",2
"lib2","SARS-CoV-2","ATTAATATAAAGAAGG",14,64.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N1W G101P S113E Y123K",4
"lib2","SARS-CoV-2","ATTAATATACGAATGG",6,0.02,NA,NA,NA,NA,NA,NA,"stop","K132* G146D",2
"lib2","SARS-CoV-2","ATTAATATCTAAGAAA",1,45.88,10.87,0.03,0.05,2.88,1.14,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","ATTAATATCTGTACAC",10,178.84,10.08,-0.75,0.05,2.43,1,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","ATTAATATGCAACCTA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","L188* C195*",2
"lib2","SARS-CoV-2","ATTAATATTGTCAAAT",9,126.11,10.69,-0.15,0.05,2.97,1.03,0,">1 nonsynonymous","S41Y K48N P149T",3
"lib2","SARS-CoV-2","ATTAATCAAAGCGAAA",7,133.92,10.85,0.01,0.04,2.95,1.07,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","ATTAATCAACATCTGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATTAATCAATAGCCAC",5,151.47,10.24,-0.6,0.03,2.87,1.03,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","ATTAATCACAGGGGAA",9,87.58,9.93,-0.9,0.07,2.14,1.04,0,">1 nonsynonymous","I28L I104S L187H",3
"lib2","SARS-CoV-2","ATTAATCAGCAAACCT",1,21.36,10.82,-0.02,0.06,2.9,1.12,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","ATTAATCCCGATTACA",6,118.52,10.26,-0.57,0.06,2.68,1.06,0,">1 nonsynonymous","L5K P54R S69R",3
"lib2","SARS-CoV-2","ATTAATCCTTAGAGAA",9,86.87,6.41,-4.43,0.35,1.5,1.09,0.01,">1 nonsynonymous","I104C L131K",2
"lib2","SARS-CoV-2","ATTAATCGCTGCACTT",7,212.96,10.84,0,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAATCGTATTGGTG",9,113.34,9.22,-1.61,0.06,2.91,1.08,0,">1 nonsynonymous","N30R T55Y Y119N",3
"lib2","SARS-CoV-2","ATTAATCTAATACCAA",3,11.2,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","D90T V115I Y123P G146W",4
"lib2","SARS-CoV-2","ATTAATCTAATATGTG",5,42.95,10.29,-0.54,0.07,2.84,1.11,0,">1 nonsynonymous","N4T G146D",2
"lib2","SARS-CoV-2","ATTAATCTGTCATGAG",3,40.33,9.49,-1.35,0.08,2.82,1.19,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","ATTAATGAAAATATTG",3,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H P96S G116M T201N",4
"lib2","SARS-CoV-2","ATTAATGAAGTACAAA",4,23.28,9.19,-1.64,0.05,2.92,1.12,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","ATTAATGACCATGACT",6,178.18,10.8,-0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAATGAGCAGTGAT",9,55.34,8.87,-1.97,0.29,1.5,1,0.06,">1 nonsynonymous","I88Q N110K P149A",3
"lib2","SARS-CoV-2","ATTAATGAGTGGGCTG",18,59.24,6.34,-4.5,0.58,1.5,1.1,0.03,">1 nonsynonymous","N1L I80L G116A K128V E141L T148R",6
"lib2","SARS-CoV-2","ATTAATGCCAAGTGAC",16,163.79,10.27,-0.57,0.01,2.93,1.06,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","ATTAATGGACACCAAG",1,22.72,10.7,-0.13,0.05,2.94,1.1,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","ATTAATGGACCCGCGA",16,309.56,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S19W V37K Y123L K128L N157D",5
"lib2","SARS-CoV-2","ATTAATGGATATAATT",1,26.29,10.35,-0.48,0.06,2.86,1.05,0,">1 nonsynonymous","L60M R127S",2
"lib2","SARS-CoV-2","ATTAATGGATCTAAGG",3,74.94,10.87,0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAATGGCGAAAAAC",11,53.71,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W106S R136S Q168P",3
"lib2","SARS-CoV-2","ATTAATGGGATCGCAT",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T G83P P161C",3
"lib2","SARS-CoV-2","ATTAATGGTAGTTGTG",5,10.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T100P L131N E154V K199S",4
"lib2","SARS-CoV-2","ATTAATGTACTAACTT",2,50.51,10.47,-0.36,0.06,2.82,1.2,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","ATTAATGTTTTTCAGT",3,34.19,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K128Y C150G",2
"lib2","SARS-CoV-2","ATTAATTAAATAGAAA",3,16.23,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","ATTAATTAACAGTATG",7,121.3,10.83,-0.01,0.04,2.92,1.1,0,">1 nonsynonymous","T3S T15S Y39F L122F S200R",5
"lib2","SARS-CoV-2","ATTAATTACTAACACT",4,112.94,10.81,-0.02,0.03,2.94,1.04,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","ATTAATTAGTGTTGGC",1,5.61,NA,NA,NA,NA,NA,NA,"stop","A18T F134L V153* G196C",4
"lib2","SARS-CoV-2","ATTAATTATATAGATT",13,140.6,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V20E L38P A89R N107C",4
"lib2","SARS-CoV-2","ATTAATTATCTTCGTA",3,17.65,9.7,-1.13,0.05,2.99,1.01,0,">1 nonsynonymous","P7A G166V",2
"lib2","SARS-CoV-2","ATTAATTATTCACCTT",9,112.15,8.26,-2.58,0.13,1.5,1.09,0.01,">1 nonsynonymous","R127Y F160Y",2
"lib2","SARS-CoV-2","ATTAATTATTGACTAG",6,123.55,10.82,-0.01,0.05,2.86,1.07,0,"1 nonsynonymous","Q84V",1
"lib2","SARS-CoV-2","ATTAATTCACATTTTG",5,38.3,8.93,-1.91,0.4,1.5,1,0.07,">1 nonsynonymous","V37K Y93M",2
"lib2","SARS-CoV-2","ATTAATTCCATAACCA",1,27.34,10.24,-0.6,0.1,2.64,1.08,0,">1 nonsynonymous","L60T V181I",2
"lib2","SARS-CoV-2","ATTAATTCCCGTGAGA",4,23.96,9,-1.83,0.13,1.78,1.1,0.01,">1 nonsynonymous","Y50R K198T",2
"lib2","SARS-CoV-2","ATTAATTCGAAGAGGG",16,60,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A22V T85E L95M N157L G172H",5
"lib2","SARS-CoV-2","ATTAATTGGCATCATA",1,27.7,10.26,-0.58,0.04,2.91,1,0,">1 nonsynonymous","K56L L60K D97Y",3
"lib2","SARS-CoV-2","ATTAATTGTGCCGATA",2,42.87,6.25,-4.58,0.41,1.5,1.11,0.01,">1 nonsynonymous","C6D A67L D97Y P177K S200H",5
"lib2","SARS-CoV-2","ATTAATTGTTACGAGA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","W23Y N118*",2
"lib2","SARS-CoV-2","ATTAATTTAATCCGCA",4,77.17,8.42,-2.41,0.16,1.58,1.07,0.01,">1 nonsynonymous","F12L T63E K87S V173S",4
"lib2","SARS-CoV-2","ATTAATTTACCTGACG",4,35.82,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V115I Y119F Y159C",3
"lib2","SARS-CoV-2","ATTAATTTCTTTCTTC",17,135.39,8.41,-2.43,0.06,1.62,1.11,0,">1 nonsynonymous","D59R R73T P96A",3
"lib2","SARS-CoV-2","ATTAATTTGTCCATAC",9,63.25,9.07,-1.77,0.1,1.87,1.03,0,">1 nonsynonymous","G9R Y35S I138W S147V",4
"lib2","SARS-CoV-2","ATTAATTTTAAATGGC",11,5.39,NA,NA,NA,NA,NA,NA,"stop","L5A A42L E76A W106V Y175*",5
"lib2","SARS-CoV-2","ATTACAAAATAAGGCC",9,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D L183S",2
"lib2","SARS-CoV-2","ATTACAAACCGTAGAT",1,0.97,NA,NA,NA,NA,NA,NA,"stop","F62S Q168*",2
"lib2","SARS-CoV-2","ATTACAAAGATGAATT",3,507.24,9.1,-1.74,0.06,1.71,1.06,0,">1 nonsynonymous","F12S T55S K132L",3
"lib2","SARS-CoV-2","ATTACAAAGGAAGGAA",1,13.21,9.38,-1.45,0.28,1.85,1,0.06,">1 nonsynonymous","N1A Y91T V173A",3
"lib2","SARS-CoV-2","ATTACAAATTACGTCT",6,115.69,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","E154C Y159R",2
"lib2","SARS-CoV-2","ATTACAACCTGTTGAG",7,64.65,10.9,0.06,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACAACGCAAAAAC",6,15.03,7.59,-3.25,0.38,1.5,1.18,0.05,"1 nonsynonymous","W106D",1
"lib2","SARS-CoV-2","ATTACAAGAAGAGTCA",9,223.29,10.66,-0.17,0.02,2.97,1.03,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","ATTACAAGACGTACAT",3,5.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W F167L",2
"lib2","SARS-CoV-2","ATTACAAGATAACGTA",4,42.61,8.1,-2.74,0.26,1.5,1.1,0.03,">1 nonsynonymous","P82S S147A V173R Y178F",4
"lib2","SARS-CoV-2","ATTACAAGGCCAGACG",5,47.94,6,-4.84,2,1.5,1.22,0.03,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","ATTACAAGTGTGAATA",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G T55L G146R",3
"lib2","SARS-CoV-2","ATTACAATACTCTAGC",2,29.94,8.3,-2.54,0.24,1.5,1.11,0.02,">1 nonsynonymous","L5F D112Y",2
"lib2","SARS-CoV-2","ATTACAATAGGCTAAT",4,40.88,9.9,-0.94,0.12,2.13,1.04,0.01,">1 nonsynonymous","K56P D90S Y178F",3
"lib2","SARS-CoV-2","ATTACAATATAATCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* C49S S113V Y119V Y178C",5
"lib2","SARS-CoV-2","ATTACAATCACAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42L T100* N130Q Q144P T201L",5
"lib2","SARS-CoV-2","ATTACAATCGCTTCAA",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y Y39M",2
"lib2","SARS-CoV-2","ATTACAATTAATACGA",9,83.21,10.83,-0.01,0.06,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACACAAAATGGTG",6,78.61,10.75,-0.08,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACACAAAGTATTC",2,14.34,10.69,-0.15,0.05,2.88,1.15,0,">1 nonsynonymous","K56S F62Y",2
"lib2","SARS-CoV-2","ATTACACAAATTACGT",18,135.48,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F17R S43L D90R T100R R136A N171E",6
"lib2","SARS-CoV-2","ATTACACACAGTCTTA",1,44.89,10.13,-0.71,0.07,2.82,1.12,0,">1 nonsynonymous","T3I Y35L T148E G155C T201P",5
"lib2","SARS-CoV-2","ATTACACAGAGAATGA",1,22.87,10.09,-0.74,0.1,2.5,1,0.01,">1 nonsynonymous","D98I P149W",2
"lib2","SARS-CoV-2","ATTACACAGGAGAGTA",1,0.4,NA,NA,NA,NA,NA,NA,"stop","A18Y S41F T140D Q144* E154L",5
"lib2","SARS-CoV-2","ATTACACATACAGCAT",8,122.95,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I88R S129A",2
"lib2","SARS-CoV-2","ATTACACCAAAAAAGT",1,6.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35K F47E T148F",3
"lib2","SARS-CoV-2","ATTACACCAACGAGGA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N L183R G196V",3
"lib2","SARS-CoV-2","ATTACACCCTAAAGCT",4,87.11,9.09,-1.74,0.06,2.15,1.11,0,">1 nonsynonymous","K48V Y123M L162F",3
"lib2","SARS-CoV-2","ATTACACCGAAATTGT",5,50.14,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","I104P C150T",2
"lib2","SARS-CoV-2","ATTACACGAAATGTAA",4,1099.52,8.04,-2.8,0.1,2.36,1.05,0,">1 nonsynonymous","S41C I142N F156G",3
"lib2","SARS-CoV-2","ATTACACTCCTGTACA",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H L38V W106H F185Y",4
"lib2","SARS-CoV-2","ATTACACTTAAAAAAT",1,1.15,NA,NA,NA,NA,NA,NA,"stop","Y35F K56Q S113F P149* F160R",5
"lib2","SARS-CoV-2","ATTACAGACGACCAGG",1,21.82,6,-4.84,2,3,1.13,0,">1 nonsynonymous","K94Q R179C",2
"lib2","SARS-CoV-2","ATTACAGATATACTAT",11,2.03,NA,NA,NA,NA,NA,NA,"stop","N40Q L122S P197*",3
"lib2","SARS-CoV-2","ATTACAGATGATTTAG",1,17.04,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T3I N171D F185K",3
"lib2","SARS-CoV-2","ATTACAGCAACACTCC",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S T46Y C61N K128L P149L",5
"lib2","SARS-CoV-2","ATTACAGCCGAGTAAC",2,27.44,10.51,-0.33,0.2,2.82,1.02,0.02,">1 nonsynonymous","D98M T201D",2
"lib2","SARS-CoV-2","ATTACAGCGCTAAACG",7,22,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","I104E",1
"lib2","SARS-CoV-2","ATTACAGGAACTAGCA",1,6.63,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","A33P C49G",2
"lib2","SARS-CoV-2","ATTACAGGATAGGCAG",11,217.26,6.1,-4.74,0.57,1.5,1.16,0.01,">1 nonsynonymous","Y119S K128G Q176R",3
"lib2","SARS-CoV-2","ATTACAGGGTAACTAT",7,15.74,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W23H S43L I80S",3
"lib2","SARS-CoV-2","ATTACAGTACGGACCG",9,0.64,NA,NA,NA,NA,NA,NA,"stop","S19K K94P W106* L183P",4
"lib2","SARS-CoV-2","ATTACAGTATAGTTAA",3,15.1,6,-4.84,2,3,1.3,0.02,">1 nonsynonymous","V52K L60S G86N",3
"lib2","SARS-CoV-2","ATTACAGTCATAATGA",6,70.51,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","Q84M F99E Y119V Y165L",4
"lib2","SARS-CoV-2","ATTACAGTGTACATGC",7,56.65,10.68,-0.15,0.05,2.95,1.08,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","ATTACAGTGTCAACTT",7,3.49,NA,NA,NA,NA,NA,NA,"stop","F99* G174L",2
"lib2","SARS-CoV-2","ATTACATAAAGTTATG",2,0.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77Q",1
"lib2","SARS-CoV-2","ATTACATATAACTGTA",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V R73C E141G P169I S184H",5
"lib2","SARS-CoV-2","ATTACATCAATAAAAA",7,65.61,9.93,-0.91,0.06,2.85,1.04,0,">1 nonsynonymous","G116N Y121M",2
"lib2","SARS-CoV-2","ATTACATCATAGTCAT",8,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S D34S V77L W106K K198R",5
"lib2","SARS-CoV-2","ATTACATGAACACTTT",1,11.46,10.32,-0.51,0.14,2.96,1.03,0.01,">1 nonsynonymous","T3L S147V Y175F",3
"lib2","SARS-CoV-2","ATTACATTCAAAAATT",7,168.31,8.16,-2.67,0.15,1.84,1.09,0.01,">1 nonsynonymous","L60M Y165E",2
"lib2","SARS-CoV-2","ATTACATTCTTAGAGT",17,191.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A67N G117D",2
"lib2","SARS-CoV-2","ATTACCAACTGAGACT",1,5.85,6.68,-4.16,0.26,1.97,1.11,0.01,">1 nonsynonymous","Q144E Y165T",2
"lib2","SARS-CoV-2","ATTACCAAGCCTTGCG",20,210.14,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P82E N92T",2
"lib2","SARS-CoV-2","ATTACCAAGGTGGTAC",2,25.21,10.89,0.05,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACCAATATAGAGA",8,68.37,10.99,0.15,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACCAATTCTACCT",10,85.74,9.43,-1.41,0.07,2.24,1.09,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","ATTACCAATTCTTCAG",4,53.77,9.72,-1.12,0.08,2.36,1.05,0,"1 nonsynonymous","I72M",1
"lib2","SARS-CoV-2","ATTACCACAACCTTCA",4,49.82,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61A D68A A89Y C102W",4
"lib2","SARS-CoV-2","ATTACCACCGCGGGTG",3,31.07,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N58S L95R T100V L122D E135S P149G Y165R",7
"lib2","SARS-CoV-2","ATTACCAGAAGCGATA",3,9.4,7.9,-2.93,0.49,1.6,1.05,0.05,">1 nonsynonymous","D34K F44S D90L",3
"lib2","SARS-CoV-2","ATTACCAGATTACAAC",9,27.68,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F44M G86A L122D",3
"lib2","SARS-CoV-2","ATTACCAGCACAAGAT",1,7.33,6,-4.84,2,1.5,1.07,0.06,">1 nonsynonymous","N157H F167G",2
"lib2","SARS-CoV-2","ATTACCAGCACCTACA",10,88.69,7.78,-3.06,0.19,1.59,1.12,0.01,">1 nonsynonymous","Y35T N109Y P149C",3
"lib2","SARS-CoV-2","ATTACCATAACGGGAA",3,16.92,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C31K C61S Y121R",3
"lib2","SARS-CoV-2","ATTACCATGCCCAAAG",21,297.63,10.28,-0.56,0.02,2.88,1.06,0,"1 nonsynonymous","G51A",1
"lib2","SARS-CoV-2","ATTACCATGTGCTATA",1,14.23,10.33,-0.51,0.2,1.96,1.14,0.03,">1 nonsynonymous","F44L G116F K132D",3
"lib2","SARS-CoV-2","ATTACCATTAAATATA",2,62.08,8.73,-2.11,0.13,2.29,1.1,0.01,">1 nonsynonymous","A105T I142R",2
"lib2","SARS-CoV-2","ATTACCATTACAAATA",1,9.41,9.93,-0.9,0.14,2.7,1.12,0.01,"1 nonsynonymous","F167Y",1
"lib2","SARS-CoV-2","ATTACCCAAAACCTAT",6,207.1,10.15,-0.69,0.04,2.7,1.03,0,">1 nonsynonymous","R16G L60S P149C P197A",4
"lib2","SARS-CoV-2","ATTACCCACTAACAAG",1,22.55,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","F62E F99A G116R T148V V153G G174E T201M",7
"lib2","SARS-CoV-2","ATTACCCATAATGTAC",2,53.63,10.73,-0.1,0.04,2.92,1.08,0,">1 nonsynonymous","T46S T140M",2
"lib2","SARS-CoV-2","ATTACCCATGTATGAA",20,99.24,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V11H K56L V103M N118D Y123G",5
"lib2","SARS-CoV-2","ATTACCCCAGTCCTCG",5,1.18,NA,NA,NA,NA,NA,NA,"stop","S19T K87* P96S I138T A145R C150L",6
"lib2","SARS-CoV-2","ATTACCCGAAACATGC",7,28.03,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y35T V103P",2
"lib2","SARS-CoV-2","ATTACCCTATCCGTTG",5,25.82,10.69,-0.14,0.05,2.96,1.05,0,">1 nonsynonymous","Y39L G155A",2
"lib2","SARS-CoV-2","ATTACCCTTGGTTGAT",9,12.6,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3H G51N V103D",3
"lib2","SARS-CoV-2","ATTACCGAGGTTTACC",6,86.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G74P Y91L F160V",3
"lib2","SARS-CoV-2","ATTACCGATACGCGCG",12,83.6,6,-4.84,2,1.5,1.19,0.03,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","ATTACCGCCCGCCCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* K87T N107W P197I",4
"lib2","SARS-CoV-2","ATTACCGCGCAGTTGT",6,339.54,8.38,-2.46,0.11,2.91,1.07,0,">1 nonsynonymous","T3S Y175M",2
"lib2","SARS-CoV-2","ATTACCGGCTTTCAAA",4,9.23,6.64,-4.19,0.78,1.5,1.39,0.08,">1 nonsynonymous","N1G Y66L V103K G117S",4
"lib2","SARS-CoV-2","ATTACCGTAATTAATT",6,107.54,7.06,-3.77,0.25,1.5,1.15,0.01,">1 nonsynonymous","C61Y K128C G146E",3
"lib2","SARS-CoV-2","ATTACCTAAAATAAGG",8,28.73,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V20H P54V I104N I138K",4
"lib2","SARS-CoV-2","ATTACCTATATCTCCT",5,35.69,8.6,-2.23,0.12,1.9,1.14,0.01,">1 nonsynonymous","I2L D59L R73P S129G",4
"lib2","SARS-CoV-2","ATTACCTCAGAACAAC",1,23.84,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y91P P96T Y119K",3
"lib2","SARS-CoV-2","ATTACCTCATCCATAA",5,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62E P96E Y159H F185N",4
"lib2","SARS-CoV-2","ATTACCTCTGAAAACA",1,16.09,10.93,0.1,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACGAAACATGGGT",7,129.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I80M D90A Y165E",3
"lib2","SARS-CoV-2","ATTACGAAGGGTACAT",1,72.34,9.54,-1.29,0.07,1.86,1.04,0,">1 nonsynonymous","G51S S139L",2
"lib2","SARS-CoV-2","ATTACGACAGGCAACC",5,13.53,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103W Y119F L183S",3
"lib2","SARS-CoV-2","ATTACGACGGGGTACA",6,68.78,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V71P G116V",2
"lib2","SARS-CoV-2","ATTACGAGAGTAGGAT",12,103.94,10.71,-0.13,0.04,2.93,1.08,0,">1 nonsynonymous","D59K L122Y",2
"lib2","SARS-CoV-2","ATTACGATAGAGGTAA",1,20.02,10.43,-0.41,0.06,2.81,1.09,0,">1 nonsynonymous","A14S A42S N151D",3
"lib2","SARS-CoV-2","ATTACGATATGATCCA",19,302.04,9.67,-1.17,0.05,2.51,1.08,0,">1 nonsynonymous","T46M K114D P133S",3
"lib2","SARS-CoV-2","ATTACGATCGATAAAA",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q T55C N64W T148D",4
"lib2","SARS-CoV-2","ATTACGATCTTAAGAT",3,19.51,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L60S G101T I104E C150I",4
"lib2","SARS-CoV-2","ATTACGATGGAGTAAT",6,65.38,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","G172E",1
"lib2","SARS-CoV-2","ATTACGCAATTAAAAA",3,2.74,NA,NA,NA,NA,NA,NA,"stop","C6* G117P",2
"lib2","SARS-CoV-2","ATTACGCAGAATAAGC",6,86.08,10.05,-0.79,0.05,3,1.01,0,">1 nonsynonymous","C61W G174K",2
"lib2","SARS-CoV-2","ATTACGCCACCGGAGT",3,86.34,10.68,-0.15,0.04,2.93,1.07,0,">1 nonsynonymous","N1L G9H R27S T55K",4
"lib2","SARS-CoV-2","ATTACGCCATATAAAG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65A G83N V103N Y123E",4
"lib2","SARS-CoV-2","ATTACGCCGACAGTAA",7,42.51,9.56,-1.27,0.13,2.56,1.11,0.01,">1 nonsynonymous","S139G P161S",2
"lib2","SARS-CoV-2","ATTACGCGATTCAACT",5,27.17,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19M D68E A105S",3
"lib2","SARS-CoV-2","ATTACGGAGTCAATAG",4,53.4,10.82,-0.02,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTACGGATACATTTT",11,57.96,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14N G86L A105S I138F V182Y",5
"lib2","SARS-CoV-2","ATTACGGATTCCACAA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","C6* G51E",2
"lib2","SARS-CoV-2","ATTACGGCCCCCAAAC",1,46.4,10.86,0.02,0.05,2.92,1.09,0,">1 nonsynonymous","K56N S147P",2
"lib2","SARS-CoV-2","ATTACGGGAAGATATC",2,39.9,10.75,-0.08,0.04,2.89,1.14,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","ATTACGGGATGCGAAT",1,29,10.17,-0.67,0.1,2.71,1.08,0,"1 nonsynonymous","R73T",1
"lib2","SARS-CoV-2","ATTACGGGCCAAAGGA",7,63.38,9.76,-1.08,0.08,2.23,1.05,0,">1 nonsynonymous","K56S G83D D90F",3
"lib2","SARS-CoV-2","ATTACGGGCTTAACAT",2,21.13,10.54,-0.3,0.07,2.94,1.02,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","ATTACGGTATAAAGGA",3,96.86,10.24,-0.6,0.03,2.92,1.01,0,">1 nonsynonymous","G9C Y123S",2
"lib2","SARS-CoV-2","ATTACGGTGCAGAAGG",1,0.67,NA,NA,NA,NA,NA,NA,"stop","F44C C49K C61G Y66W I104* Y143F T201Y",7
"lib2","SARS-CoV-2","ATTACGTACGGTAGAT",8,5.8,NA,NA,NA,NA,NA,NA,"stop","N64* N151M",2
"lib2","SARS-CoV-2","ATTACGTACGTTTATC",7,114.34,9.9,-0.94,0.05,2.59,1.03,0,">1 nonsynonymous","C6S D98T",2
"lib2","SARS-CoV-2","ATTACGTATGAATTTT",5,5.32,NA,NA,NA,NA,NA,NA,"stop","N13H C150T F160G V173* Y178T K198T",6
"lib2","SARS-CoV-2","ATTACGTCCTTCCTAA",8,96.57,10.58,-0.26,0.04,2.89,1.08,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","ATTACGTGCGTTCAGT",1,29.01,10.62,-0.22,0.07,2.94,1.09,0,">1 nonsynonymous","R27L V65A",2
"lib2","SARS-CoV-2","ATTACGTGGATGAAAA",6,0.5,NA,NA,NA,NA,NA,NA,"stop","G9* G74W F134C Y165L",4
"lib2","SARS-CoV-2","ATTACGTTATCACAGC",4,7.79,6,-4.84,2,3,1.04,0,">1 nonsynonymous","E10V S19P G86R S200F",4
"lib2","SARS-CoV-2","ATTACTAAAAAAACCT",3,88.78,10.09,-0.75,0.08,2.46,1.04,0,">1 nonsynonymous","S36I G83D",2
"lib2","SARS-CoV-2","ATTACTAAACTGCCGT",3,60.43,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N92H N157R",2
"lib2","SARS-CoV-2","ATTACTAAGTTTGACA",11,64.73,6,-4.84,0.84,1.5,1.15,0.01,">1 nonsynonymous","T55L D97E I142G G152D F156C",5
"lib2","SARS-CoV-2","ATTACTACACTAGCAT",4,0.08,NA,NA,NA,NA,NA,NA,"stop","N4T D68* Y93R R124S L162M",5
"lib2","SARS-CoV-2","ATTACTACATACACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91* Y119S R136C Q144F",4
"lib2","SARS-CoV-2","ATTACTACCCAGTCTT",11,259.65,9.26,-1.58,0.03,2.94,1.09,0,"1 nonsynonymous","Y119E",1
"lib2","SARS-CoV-2","ATTACTACTACATGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L G174S",2
"lib2","SARS-CoV-2","ATTACTACTACTACAT",8,335.97,10.5,-0.33,0.04,2.88,1.08,0,">1 nonsynonymous","K56L G174S",2
"lib2","SARS-CoV-2","ATTACTAGAACCACCA",8,146.01,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G152T P177Y",2
"lib2","SARS-CoV-2","ATTACTAGCCCCAAAC",4,108.54,10.77,-0.06,0.06,2.87,1.16,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","ATTACTAGTATTCGAA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","C31M G196*",2
"lib2","SARS-CoV-2","ATTACTAGTGAATGAG",6,34.25,9.74,-1.1,0.1,1.99,1.04,0.01,">1 nonsynonymous","A14V G51S",2
"lib2","SARS-CoV-2","ATTACTAGTTTAACCT",4,88.96,10.66,-0.17,0.04,2.92,1.06,0,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","ATTACTATAAGTGAAC",2,42.83,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","F70R",1
"lib2","SARS-CoV-2","ATTACTATATGGGCCA",1,135.56,10.76,-0.07,0.05,2.88,1.1,0,"1 nonsynonymous","L5V",1
"lib2","SARS-CoV-2","ATTACTATGCGCAACT",7,1.26,NA,NA,NA,NA,NA,NA,"stop","I28S N120* Y165H",3
"lib2","SARS-CoV-2","ATTACTATTAGCAAGG",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V N120M",2
"lib2","SARS-CoV-2","ATTACTCAAATATCCA",1,11.26,10.86,0.03,0.11,2.95,1.09,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","ATTACTCACACTTGTT",20,163.9,9.84,-0.99,0.07,2.4,1.09,0,">1 nonsynonymous","F160I V173L",2
"lib2","SARS-CoV-2","ATTACTCACGGGTAAA",3,0.44,NA,NA,NA,NA,NA,NA,"stop","P82V P96T L122*",3
"lib2","SARS-CoV-2","ATTACTCATACTTCGC",12,14.37,NA,NA,NA,NA,NA,NA,"stop","V115* R127F T170G",3
"lib2","SARS-CoV-2","ATTACTCATGGGAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I T170C Y175G",3
"lib2","SARS-CoV-2","ATTACTCCCGATTTCT",3,33.92,9.71,-1.13,0.11,2.65,1.09,0,">1 nonsynonymous","F99L S129T V173A S200K",4
"lib2","SARS-CoV-2","ATTACTCCGAGTTCCT",5,1.91,NA,NA,NA,NA,NA,NA,"stop","I2A E76* D137L",3
"lib2","SARS-CoV-2","ATTACTCCTCATAACT",2,40.77,9.6,-1.23,0.08,1.86,1.14,0,">1 nonsynonymous","G9L G51E",2
"lib2","SARS-CoV-2","ATTACTCGAATCTGAT",5,36.28,10.85,0.01,0.1,2.86,1.12,0,"1 nonsynonymous","T63K",1
"lib2","SARS-CoV-2","ATTACTCTAGCTCCAA",8,82.11,10.55,-0.28,0.04,2.99,1.01,0,">1 nonsynonymous","V37D G155T",2
"lib2","SARS-CoV-2","ATTACTCTGAATCCAG",1,27.35,9.61,-1.22,0.13,2.44,1.03,0.01,">1 nonsynonymous","A81F K87M",2
"lib2","SARS-CoV-2","ATTACTCTGATAATGT",5,55.6,10.74,-0.1,0.04,2.9,1.12,0,"1 nonsynonymous","K132S",1
"lib2","SARS-CoV-2","ATTACTGAATTTAAGC",4,54.56,8.87,-1.96,0.06,2.98,1.05,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","ATTACTGCATATAATC",7,123.23,6,-4.84,1.59,1.5,1.21,0.01,">1 nonsynonymous","T46A G74C Y119T R136T Y165S",5
"lib2","SARS-CoV-2","ATTACTGCTAATCTTC",11,40.36,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","E10K T15I F47S D68V G101A F156I",6
"lib2","SARS-CoV-2","ATTACTGTAAGGAAAG",1,17.64,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","R25S Q84H F134I T140Q P149H",5
"lib2","SARS-CoV-2","ATTACTGTACAGATCC",4,26.81,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","ATTACTTACCCGCACT",9,229.58,8.54,-2.29,0.09,2.93,1.08,0,">1 nonsynonymous","E10R S43N F156E Y178F T201L",5
"lib2","SARS-CoV-2","ATTACTTCCCAAACTG",8,42.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P96A T148A C150V G174P",4
"lib2","SARS-CoV-2","ATTACTTCGAAACACT",3,16.52,9.53,-1.3,0.11,2.11,1.05,0.01,">1 nonsynonymous","Q79G D97I T201N",3
"lib2","SARS-CoV-2","ATTACTTCTGATCATT",7,62.93,6,-4.84,0.83,1.5,1.11,0.01,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","ATTACTTGCATACAGT",2,11.59,7.81,-3.03,0.18,1.68,1.07,0.01,">1 nonsynonymous","I2T D34H V77M N130Y G146S",5
"lib2","SARS-CoV-2","ATTACTTTAACCACGA",4,41.6,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y121Q L131W",2
"lib2","SARS-CoV-2","ATTACTTTCTGTTGAG",3,39.35,7.71,-3.13,0.2,1.5,1.02,0.02,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","ATTACTTTGATGAACA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","S43D G51Y K87*",3
"lib2","SARS-CoV-2","ATTAGAAAAATTTGAA",4,0.43,NA,NA,NA,NA,NA,NA,"stop","D68N I138Q S147*",3
"lib2","SARS-CoV-2","ATTAGAAAACATCAAT",2,23,10.62,-0.22,0.06,3,1,0,"1 nonsynonymous","I138Q",1
"lib2","SARS-CoV-2","ATTAGAAAAGGCCACC",6,39.41,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C49D E76K A89N",3
"lib2","SARS-CoV-2","ATTAGAAACACCGAGA",3,11.17,9.98,-0.86,0.17,2.47,1.01,0.01,">1 nonsynonymous","L5C S45W",2
"lib2","SARS-CoV-2","ATTAGAAAGAATTTAG",2,31.8,10.77,-0.07,0.06,2.93,1.06,0,"1 nonsynonymous","S29K",1
"lib2","SARS-CoV-2","ATTAGAAATTTAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* V11N T15S C49F C61P V103L L122T Y159K T170S",9
"lib2","SARS-CoV-2","ATTAGAACAAACCGCG",28,11.59,NA,NA,NA,NA,NA,NA,"stop","A18* C61W I142F",3
"lib2","SARS-CoV-2","ATTAGAACCTAAAAAT",15,118.96,6.43,-4.4,0.34,1.5,1.17,0.01,">1 nonsynonymous","L5F C49Y G166H",3
"lib2","SARS-CoV-2","ATTAGAACTTTTTATG",3,17.76,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C49N R127C D137G",3
"lib2","SARS-CoV-2","ATTAGAAGTAAGTTAC",6,104.91,8.61,-2.23,0.06,2.94,1.05,0,"1 nonsynonymous","S113M",1
"lib2","SARS-CoV-2","ATTAGAAGTGCCACTA",1,7.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F C49L R73V Y143M",4
"lib2","SARS-CoV-2","ATTAGAATATATTGGA",7,114.12,10.88,0.05,0.05,2.92,1.08,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","ATTAGAATGAAGGCTT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","G86V I104L K128D E141*",4
"lib2","SARS-CoV-2","ATTAGAATTAACAAGT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y G101S G146T G172I",4
"lib2","SARS-CoV-2","ATTAGAATTCAAAATC",10,279.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18T T148S Y159S T201S",4
"lib2","SARS-CoV-2","ATTAGAATTCGATCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28F N107* N157S",3
"lib2","SARS-CoV-2","ATTAGACAAAGCCCCT",6,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53N P96D S113V Y119Q",4
"lib2","SARS-CoV-2","ATTAGACACGTGAACA",6,153.41,10.47,-0.36,0.04,2.93,1.09,0,"1 nonsynonymous","V115G",1
"lib2","SARS-CoV-2","ATTAGACATAGAAGTC",10,2.33,NA,NA,NA,NA,NA,NA,"stop","K48* Y121H P149S",3
"lib2","SARS-CoV-2","ATTAGACCTATTTCCT",3,50.46,10.09,-0.74,0.06,2.87,1.02,0,">1 nonsynonymous","D59V L125F",2
"lib2","SARS-CoV-2","ATTAGACCTTCTGACA",16,43.87,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S41Y V115L L131Q S139T Q163P Y175F",6
"lib2","SARS-CoV-2","ATTAGACGTAATCCTA",7,73.89,8.03,-2.81,0.13,1.5,1.01,0.01,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","ATTAGACGTCGCCCAT",8,106.85,10.38,-0.46,0.04,2.93,1.04,0,">1 nonsynonymous","L60T D98S",2
"lib2","SARS-CoV-2","ATTAGACTGCTATGTA",15,8.73,NA,NA,NA,NA,NA,NA,"stop","V65* D90F K128Y D137Y N157S",5
"lib2","SARS-CoV-2","ATTAGACTTTAGCATG",4,47.5,10.16,-0.68,0.07,2.89,1.01,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","ATTAGAGATCATATTT",5,51.19,10.88,0.05,0.03,2.93,1.04,0,"1 nonsynonymous","N4R",1
"lib2","SARS-CoV-2","ATTAGAGCGCCAATTC",1,40.44,10.68,-0.16,0.04,2.98,1.05,0,">1 nonsynonymous","A33L V115T",2
"lib2","SARS-CoV-2","ATTAGAGGCAAGAAGC",10,2.25,NA,NA,NA,NA,NA,NA,"stop","N13A L38P C49* D59N L122Q",5
"lib2","SARS-CoV-2","ATTAGAGTCAATTTGA",5,32.99,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6L L95P N107E",3
"lib2","SARS-CoV-2","ATTAGAGTCGGATAAG",2,345.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P82N E141D L183I",3
"lib2","SARS-CoV-2","ATTAGAGTGTAGAATA",5,71.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25T R27T N58Y Y123L G166S G174S K198A",7
"lib2","SARS-CoV-2","ATTAGATAAAACTATA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","ATTAGATACAGCCTGG",1,13.32,10.67,-0.16,0.08,2.79,1.21,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","ATTAGATACGTTCGCA",1,34.32,7.73,-3.11,0.15,1.5,1.07,0.01,">1 nonsynonymous","W106E Y119K",2
"lib2","SARS-CoV-2","ATTAGATAGATTTATA",8,2.17,NA,NA,NA,NA,NA,NA,"stop","N13P D34S A89N D98*",4
"lib2","SARS-CoV-2","ATTAGATATGATACGG",8,130.53,9.86,-0.97,0.04,2.04,1.05,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","ATTAGATATGATTACA",3,36.44,10.1,-0.73,0.06,2.91,1.07,0,"1 nonsynonymous","T170K",1
"lib2","SARS-CoV-2","ATTAGATATTGATAAG",2,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60A R73D G101V S200I",4
"lib2","SARS-CoV-2","ATTAGATCAAAGCGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* G172*",2
"lib2","SARS-CoV-2","ATTAGATCAACGAATA",3,18.28,10.71,-0.13,0.08,2.94,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTAGATCTAATTAGA",7,105.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6V G152P P161Q",3
"lib2","SARS-CoV-2","ATTAGATCTAGTCTTA",3,87.76,10.8,-0.04,0.04,2.94,1.08,0,">1 nonsynonymous","S41C P54E L60Y",3
"lib2","SARS-CoV-2","ATTAGATCTGCACCTA",7,1.88,NA,NA,NA,NA,NA,NA,"stop","N107F G116T N130* I138T F167V Y178T E186S",7
"lib2","SARS-CoV-2","ATTAGATGCAATAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44V N58L K128E E141R G166*",5
"lib2","SARS-CoV-2","ATTAGATGCTGCCAAG",7,82.62,10.84,0,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGATGGAACTCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T T201Q",2
"lib2","SARS-CoV-2","ATTAGATTACTGAACA",12,0.85,NA,NA,NA,NA,NA,NA,"stop","R27K S45* K56W C102W Y175S",5
"lib2","SARS-CoV-2","ATTAGATTCCAAGTAC",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83E E141L S147P N157A",4
"lib2","SARS-CoV-2","ATTAGATTCCGAAGTG",7,52.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41T D59M V71S G101D K114T",5
"lib2","SARS-CoV-2","ATTAGCAAACACCCCA",8,128.3,10.41,-0.42,0.04,2.91,1.07,0,"1 nonsynonymous","C31P",1
"lib2","SARS-CoV-2","ATTAGCAACCCCAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","T55P D90P Y123D K198*",4
"lib2","SARS-CoV-2","ATTAGCAATACTTTCC",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E K87L V181C K199T",4
"lib2","SARS-CoV-2","ATTAGCACAGACCGTT",1,20.46,10.81,-0.03,0.06,3,1.02,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","ATTAGCACTTTACGCA",4,99.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168H",1
"lib2","SARS-CoV-2","ATTAGCATATATTATG",1,5.9,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","T46V K56M Y91L Q144S C158S",5
"lib2","SARS-CoV-2","ATTAGCCAGTATCACG",4,61.74,10.22,-0.61,0.04,2.8,1.09,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","ATTAGCCATTGATCCG",12,111.75,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N58Y V71S G117S P177R",4
"lib2","SARS-CoV-2","ATTAGCCCGAACTAAA",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K F99Q K132L",3
"lib2","SARS-CoV-2","ATTAGCCCGGATGACA",3,8.5,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S45V V77G T201W",3
"lib2","SARS-CoV-2","ATTAGCCTGATTAACT",10,0.11,NA,NA,NA,NA,NA,NA,"stop","A14N A22* P82L D112V Y143Q",5
"lib2","SARS-CoV-2","ATTAGCGAAAAGTTTG",5,36.7,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N1R D59H C102Y Y119E E154P",5
"lib2","SARS-CoV-2","ATTAGCGACCCCACGT",4,40.47,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C49V D68S",2
"lib2","SARS-CoV-2","ATTAGCGAGAAGAAAC",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T Y91P W106G",3
"lib2","SARS-CoV-2","ATTAGCGAGACGATTC",16,171.01,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L5N V37A D68R S147H",4
"lib2","SARS-CoV-2","ATTAGCGGAGAATCTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","ATTAGCGGCTTGAGAC",7,0.18,NA,NA,NA,NA,NA,NA,"stop","A14S G51M N58A F126* Q163S P197Q",6
"lib2","SARS-CoV-2","ATTAGCGGGGAGTATA",6,103.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y119D C158L K198R",3
"lib2","SARS-CoV-2","ATTAGCGTAGAATGCC",10,93.34,8.65,-2.18,0.19,1.5,1.09,0.01,"1 nonsynonymous","E76R",1
"lib2","SARS-CoV-2","ATTAGCTAAAACGTAG",4,18.04,10.93,0.09,0.07,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTAGCTAATGATCCA",6,69.62,10.67,-0.16,0.04,2.94,1.06,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","ATTAGCTGAATATCGA",9,97.49,9.64,-1.2,0.06,2.02,1.04,0,">1 nonsynonymous","L5C N64L S139F L188S",4
"lib2","SARS-CoV-2","ATTAGCTGCACAATTC",6,33.04,9.5,-1.33,0.12,2.69,1.11,0.01,">1 nonsynonymous","P54S N120T",2
"lib2","SARS-CoV-2","ATTAGCTGTTTATTAA",5,38.48,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D34S Y165P",2
"lib2","SARS-CoV-2","ATTAGCTTACCCACAT",4,11.17,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15V P82F",2
"lib2","SARS-CoV-2","ATTAGGAACAGTAATA",2,17.88,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N13I L38A Y121T",3
"lib2","SARS-CoV-2","ATTAGGAATAAGCCAC",8,98.43,9.12,-1.72,0.07,2.22,1.08,0,">1 nonsynonymous","V37I N107V",2
"lib2","SARS-CoV-2","ATTAGGAATCTGTACG",2,74.6,10.94,0.11,0.08,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGGACCTTCAGCG",2,11.46,10.66,-0.17,0.14,2.78,1.07,0.01,">1 nonsynonymous","N4S D90H T100Y L188Q",4
"lib2","SARS-CoV-2","ATTAGGACTGGCATGA",5,0.49,NA,NA,NA,NA,NA,NA,"stop","Q144*",1
"lib2","SARS-CoV-2","ATTAGGACTTAAAAAG",2,36.14,7.93,-2.91,0.2,1.5,1.06,0.02,">1 nonsynonymous","K26S P133Q G146H F156Y",4
"lib2","SARS-CoV-2","ATTAGGAGCAAAATGC",8,155.83,10.67,-0.17,0.03,2.96,1.04,0,"1 nonsynonymous","K128C",1
"lib2","SARS-CoV-2","ATTAGGATTAATGACA",3,58.85,10.61,-0.23,0.04,2.93,1.08,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","ATTAGGATTATCGGCA",5,46.55,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55E I88R",2
"lib2","SARS-CoV-2","ATTAGGCATAATCGAA",5,67.24,10.7,-0.14,0.05,3,1.01,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","ATTAGGCCTATGTTGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I L95E T148N",3
"lib2","SARS-CoV-2","ATTAGGCGCTTAGGAC",10,45.34,6.37,-4.47,0.56,1.5,1.2,0.02,">1 nonsynonymous","S43L L131P V180M",3
"lib2","SARS-CoV-2","ATTAGGCGTCCCTGAT",9,63.62,6.5,-4.33,0.49,1.5,1.26,0.02,">1 nonsynonymous","T15M T46P S184I",3
"lib2","SARS-CoV-2","ATTAGGCGTTGAATCG",9,85.22,10.8,-0.04,0.08,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGGCTAGCTCTCA",7,131.42,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E10G N40W K94M W106F V173S",5
"lib2","SARS-CoV-2","ATTAGGGCACACTGCA",4,139.33,8.68,-2.16,0.06,2.86,1.05,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","ATTAGGGCCGTTTAAG",14,103.78,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T55R P82K C158M V173I",4
"lib2","SARS-CoV-2","ATTAGGTACTAAATTT",1,27.29,6,-4.84,1.5,3,1.16,0,">1 nonsynonymous","N13C D68V E141M Q176R",4
"lib2","SARS-CoV-2","ATTAGGTATACAACCA",9,133.82,10.74,-0.1,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGGTGACCAGTCC",4,68.65,9.33,-1.51,0.06,1.91,1.09,0,">1 nonsynonymous","P7V K26Y F62S S129C",4
"lib2","SARS-CoV-2","ATTAGGTGCTATAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F L60I W106K K198G",4
"lib2","SARS-CoV-2","ATTAGGTTAAACTGGG",6,85.7,10.82,-0.02,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGGTTATCTATAA",1,13.36,8.56,-2.28,0.21,1.65,1.1,0.02,">1 nonsynonymous","K87Q F99L E186S",3
"lib2","SARS-CoV-2","ATTAGGTTCACCGAAT",2,47.09,9.8,-1.03,0.28,1.5,1,0.03,">1 nonsynonymous","L5S Y39E A89R E154Q",4
"lib2","SARS-CoV-2","ATTAGGTTCGAAAAAA",1,14.91,10.84,0.01,0.07,2.86,1.17,0,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","ATTAGTAAAATGCAAA",7,92.11,7.86,-2.98,0.14,2.03,1.19,0.01,"1 nonsynonymous","C158N",1
"lib2","SARS-CoV-2","ATTAGTAAATCGTGTG",7,0.77,NA,NA,NA,NA,NA,NA,"stop","L5G G74F G83K V103M G166*",5
"lib2","SARS-CoV-2","ATTAGTAACGGGTGAT",7,154.15,10.91,0.08,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTAGTAATTTTATAC",6,41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P149G G166E V182F",3
"lib2","SARS-CoV-2","ATTAGTACGACGAGTG",1,36.05,6,-4.84,2,2.48,1.22,0,">1 nonsynonymous","Y39S P96N N130M T170I",4
"lib2","SARS-CoV-2","ATTAGTAGAGTCAACT",7,1.11,NA,NA,NA,NA,NA,NA,"stop","T15* F160M G166S",3
"lib2","SARS-CoV-2","ATTAGTATACAACGGC",14,80.91,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L95H N109A L111I N118F F156L",5
"lib2","SARS-CoV-2","ATTAGTATTACTCTGT",1,34.83,10.39,-0.45,0.06,2.84,1.1,0,">1 nonsynonymous","V20A T201K",2
"lib2","SARS-CoV-2","ATTAGTATTGCTTTTA",7,117.75,7.82,-3.01,0.18,1.5,1.08,0.01,">1 nonsynonymous","G9W A42V N157P",3
"lib2","SARS-CoV-2","ATTAGTCAAAACCCGT",15,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L K87Y",2
"lib2","SARS-CoV-2","ATTAGTCAAGTAATAT",10,2.2,NA,NA,NA,NA,NA,NA,"stop","Q79* L131V",2
"lib2","SARS-CoV-2","ATTAGTCAGGGATGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101Y L131S T201Y",3
"lib2","SARS-CoV-2","ATTAGTCAGTCACAAA",2,7.62,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y35V F44V A105R",3
"lib2","SARS-CoV-2","ATTAGTCCATGAAAAA",4,187.8,10.74,-0.1,0.03,2.94,1.07,0,">1 nonsynonymous","A42D D59A",2
"lib2","SARS-CoV-2","ATTAGTCGGAAACTAT",6,47.27,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","V20R I72L S113L",3
"lib2","SARS-CoV-2","ATTAGTCGGTGGCTAA",1,31.61,10.32,-0.52,0.06,2.94,1.01,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","ATTAGTCGTACCCTAG",10,157.24,7.06,-3.77,0.1,1.75,1.11,0,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","ATTAGTGAAAAGATAG",1,30.87,8.36,-2.48,0.13,1.99,1.03,0.01,">1 nonsynonymous","W106V G146T",2
"lib2","SARS-CoV-2","ATTAGTGAATAAACCG",2,14.22,9.68,-1.15,0.23,2.56,1.13,0.02,">1 nonsynonymous","N4H F44I C61K L162M",4
"lib2","SARS-CoV-2","ATTAGTGACACATTGC",2,35.66,9.83,-1.01,0.08,2.31,1.05,0,">1 nonsynonymous","A22T P96N V173I",3
"lib2","SARS-CoV-2","ATTAGTGCCCACAGAT",1,18.28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F47N D68Q D90N",3
"lib2","SARS-CoV-2","ATTAGTGCGATGGACG",4,0.26,NA,NA,NA,NA,NA,NA,"stop","A33E C61R P161*",3
"lib2","SARS-CoV-2","ATTAGTGCGATGTTGG",9,176.08,9.84,-0.99,0.05,2.66,1.04,0,">1 nonsynonymous","F47Y I142T",2
"lib2","SARS-CoV-2","ATTAGTGGATAAGATT",2,13.44,7.28,-3.56,0.67,1.5,1.1,0.07,">1 nonsynonymous","K94F F134R S147A",3
"lib2","SARS-CoV-2","ATTAGTGTCCTCACTA",8,12.28,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T55N V103K Y159H",3
"lib2","SARS-CoV-2","ATTAGTTACAAAGTGC",2,19.6,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F70L W106R G116H R136V P161L",5
"lib2","SARS-CoV-2","ATTAGTTCAACTCGAG",7,92.48,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63H Y143E E154V F167Y",4
"lib2","SARS-CoV-2","ATTAGTTGGAACATTA",10,142.88,10.27,-0.57,0.03,2.88,1.02,0,">1 nonsynonymous","D97G T140W",2
"lib2","SARS-CoV-2","ATTAGTTTAGTATGAC",1,4.94,NA,NA,NA,NA,NA,NA,"stop","G51W P96*",2
"lib2","SARS-CoV-2","ATTAGTTTATATCCAT",1,18.98,6.13,-4.7,0.63,2.11,1.1,0.01,">1 nonsynonymous","F8M A33K S41I G86Y",4
"lib2","SARS-CoV-2","ATTATAAAACCCACGA",10,111.14,9.09,-1.75,0.2,1.5,1,0.02,">1 nonsynonymous","T63G D68M",2
"lib2","SARS-CoV-2","ATTATAAACACCCCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F44T I88V P133* F160G",4
"lib2","SARS-CoV-2","ATTATAAACCCCAAAA",10,15.49,7.22,-3.62,0.36,2.32,1.11,0.05,">1 nonsynonymous","S45K S53F L57M F70Y V77Y K94Q Q168F A190R",8
"lib2","SARS-CoV-2","ATTATAAAGAACTTAC",2,57.52,9.31,-1.53,0.04,2.91,1.05,0,">1 nonsynonymous","Y119P S164I",2
"lib2","SARS-CoV-2","ATTATAAAGAGCATAA",11,35.63,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","R73L G152R V181S",3
"lib2","SARS-CoV-2","ATTATAAATGTGATAG",1,17.73,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V20M S36V A89L F99V",4
"lib2","SARS-CoV-2","ATTATAACCACTTAAA",5,13.28,7.95,-2.89,0.35,1.5,1.07,0.06,">1 nonsynonymous","L5P V103K F160P",3
"lib2","SARS-CoV-2","ATTATAACCCTTATAG",4,23.3,8.84,-1.99,0.22,2.07,1.09,0.02,">1 nonsynonymous","D34L Y119P S129R",3
"lib2","SARS-CoV-2","ATTATAACCGATAAAT",4,22.47,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","A14G S19G T63D E76S P82Q Y93W I104S Q144C",8
"lib2","SARS-CoV-2","ATTATAACTTGTAAGA",8,137.14,10.35,-0.48,0.03,2.83,1.09,0,">1 nonsynonymous","A14T A42H",2
"lib2","SARS-CoV-2","ATTATAAGACCAAATG",5,159.67,10.55,-0.28,0.05,2.9,1.09,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","ATTATAAGAGAAGGAG",2,7.05,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K94L V173N Y178S",3
"lib2","SARS-CoV-2","ATTATAAGATGACAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","P96R Q168V T201*",3
"lib2","SARS-CoV-2","ATTATAAGCACTGATA",5,72.48,10.82,-0.02,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATAAGCGATAAGG",2,10.55,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","K48N N58S K94P D112L R136C Q144R P161C",7
"lib2","SARS-CoV-2","ATTATAAGTGAGAGAA",8,192.88,10.6,-0.24,0.04,2.9,1.08,0,">1 nonsynonymous","D90G L122S",2
"lib2","SARS-CoV-2","ATTATAAGTTCGATAT",5,43.94,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6I D68Q K87Y Y143T N171Q",5
"lib2","SARS-CoV-2","ATTATAATACCGAAAC",3,60.26,10.19,-0.65,0.05,2.71,1.06,0,">1 nonsynonymous","T55M P96S G152S",3
"lib2","SARS-CoV-2","ATTATAATACGATCAG",4,50.64,10.9,0.06,0.05,3,1,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","ATTATAATAGACGAGC",9,164.84,9.82,-1.02,0.07,2.67,1.06,0,">1 nonsynonymous","T3I G152I",2
"lib2","SARS-CoV-2","ATTATAATATTTACCT",15,4.7,NA,NA,NA,NA,NA,NA,"stop","N4* I28P K56S K128S S139F Y178F",6
"lib2","SARS-CoV-2","ATTATAATTCACATCT",10,193.39,10.84,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATAATTTCTTCCG",13,237.64,9.21,-1.62,0.05,2.87,1.08,0,">1 nonsynonymous","N130I E154F S184I",3
"lib2","SARS-CoV-2","ATTATAATTTGGGAAT",12,10.19,NA,NA,NA,NA,NA,NA,"stop","K87* C158S P191S",3
"lib2","SARS-CoV-2","ATTATACAATACCTAC",1,15.45,10.9,0.07,0.06,3,1.02,0,"1 nonsynonymous","N130G",1
"lib2","SARS-CoV-2","ATTATACACGACGCGG",1,13.72,10.83,-0.01,0.06,2.95,1.06,0,"1 nonsynonymous","R16N",1
"lib2","SARS-CoV-2","ATTATACAGCACGCTA",4,72.58,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28R V173D Y178C F185V",4
"lib2","SARS-CoV-2","ATTATACCATTATAAA",3,49.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15L F44Y L122Y G172K T201P",5
"lib2","SARS-CoV-2","ATTATACCGCAAATTC",3,28.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A22L F44R F134P",3
"lib2","SARS-CoV-2","ATTATACCTTACATAA",1,7.98,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","V20S C102Q G116Q N157L",4
"lib2","SARS-CoV-2","ATTATACCTTTGGCAT",4,45.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55Y A105R Y165S",3
"lib2","SARS-CoV-2","ATTATACTAAGCGAGT",7,123.64,10.33,-0.5,0.05,2.85,1.06,0,">1 nonsynonymous","S43R T100D S164A",3
"lib2","SARS-CoV-2","ATTATACTATAAATTA",8,89.62,10.78,-0.06,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATACTGCACATGC",2,78.83,10.64,-0.2,0.06,3,1.03,0,">1 nonsynonymous","E10K L122M E141R T201I",4
"lib2","SARS-CoV-2","ATTATAGAACCTACTA",3,32.67,10.87,0.03,0.07,2.77,1.24,0,">1 nonsynonymous","G83Y E154K",2
"lib2","SARS-CoV-2","ATTATAGAACTGGGAG",11,91.18,10.19,-0.64,0.05,2.91,1.12,0,"1 nonsynonymous","L125G",1
"lib2","SARS-CoV-2","ATTATAGATACTTGTT",4,32.66,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50S I88Y T140L",3
"lib2","SARS-CoV-2","ATTATAGCAATGCAAC",11,238.55,8.33,-2.51,0.11,2.16,1.06,0,">1 nonsynonymous","F44D I142N V173A",3
"lib2","SARS-CoV-2","ATTATAGCCAACTGTG",2,27.71,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60H P177D",2
"lib2","SARS-CoV-2","ATTATAGCGAATCTAT",1,69.65,9.23,-1.61,0.02,2.99,1.04,0,">1 nonsynonymous","K56G Y119L",2
"lib2","SARS-CoV-2","ATTATAGCTCAAATCC",7,95.96,9.95,-0.88,0.05,2.47,1.08,0,">1 nonsynonymous","S29R K128E E135M F160S",4
"lib2","SARS-CoV-2","ATTATAGGCAATATTA",2,76.76,10.46,-0.37,0.05,2.93,1.03,0,"1 nonsynonymous","R16P",1
"lib2","SARS-CoV-2","ATTATAGGCCAAAACT",9,146.74,8.56,-2.28,0.1,2.73,1.07,0,">1 nonsynonymous","K56Q N109T Y123R P149L",4
"lib2","SARS-CoV-2","ATTATAGGCCACTCCA",2,31.04,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","V11F I72M N109C",3
"lib2","SARS-CoV-2","ATTATAGGTTACAGCG",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I V32F D112L N118S",4
"lib2","SARS-CoV-2","ATTATAGTAAGTTAAA",6,0.38,NA,NA,NA,NA,NA,NA,"stop","T100L D137*",2
"lib2","SARS-CoV-2","ATTATAGTAGACCCAT",4,44.39,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N4S W23R Y35S L60S N92K",5
"lib2","SARS-CoV-2","ATTATAGTCGGTCTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","ATTATATAAAGGTGTA",7,0.91,NA,NA,NA,NA,NA,NA,"stop","A42D P54* P133R",3
"lib2","SARS-CoV-2","ATTATATAAGCGGAAT",5,23.49,6.54,-4.3,0.7,1.5,1.14,0.05,">1 nonsynonymous","E10L K94E V173I",3
"lib2","SARS-CoV-2","ATTATATAATGAACAC",1,102.83,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D75V P177K",2
"lib2","SARS-CoV-2","ATTATATAATTTATCG",2,19.29,9.99,-0.85,0.18,2.4,1,0.01,">1 nonsynonymous","T3N D90L N130R S139A",4
"lib2","SARS-CoV-2","ATTATATACCAATTTC",2,7.03,9.66,-1.17,0.26,1.94,1.23,0.03,">1 nonsynonymous","F17L A42T P54R N120L",4
"lib2","SARS-CoV-2","ATTATATACCTTGGAA",11,80.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44Y G51H P82D Q84R K132M N157T S164M",7
"lib2","SARS-CoV-2","ATTATATAGAAACATG",1,34.35,10.11,-0.73,0.09,2.26,1.01,0,">1 nonsynonymous","W106V Q163M",2
"lib2","SARS-CoV-2","ATTATATCAGAAATGA",2,59.38,9.46,-1.37,0.12,2.05,1.02,0.01,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","ATTATATCTACAGATT",7,77.86,6,-4.84,2,3,1.18,0,">1 nonsynonymous","T55S I88R P133L",3
"lib2","SARS-CoV-2","ATTATATCTTCATAAG",5,61.77,10.03,-0.8,0.11,2.51,1.01,0,">1 nonsynonymous","N4M Y39T K128A T140Y F160V",5
"lib2","SARS-CoV-2","ATTATATGAAAACTAG",7,103.68,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12H R127V",2
"lib2","SARS-CoV-2","ATTATATGAACAAAAC",2,0.51,NA,NA,NA,NA,NA,NA,"stop","N1* N13I",2
"lib2","SARS-CoV-2","ATTATATGACTGGTTA",6,47.08,10.34,-0.5,0.18,2.7,1.16,0.01,">1 nonsynonymous","L60T P149F",2
"lib2","SARS-CoV-2","ATTATATGAGTCACGT",1,11.84,8.44,-2.4,0.29,2.08,1.26,0.03,">1 nonsynonymous","F134R T170L",2
"lib2","SARS-CoV-2","ATTATATGGATTACGC",39,631.85,10.82,-0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATATGTAGATTCA",19,110.43,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V20L K94Y G117L G152S H189Y",5
"lib2","SARS-CoV-2","ATTATATTCACAAGCT",4,10.37,9.52,-1.32,0.21,1.81,1.15,0.02,">1 nonsynonymous","E10N W106R",2
"lib2","SARS-CoV-2","ATTATATTCTACCCCT",1,13.15,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R27E C49G L95R T201V",4
"lib2","SARS-CoV-2","ATTATATTGAGCAGCA",7,0,NA,NA,NA,NA,NA,NA,"stop","D97Y S139D S184*",3
"lib2","SARS-CoV-2","ATTATATTGTCCTCGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","ATTATATTTACAGACA",1,33.53,10.06,-0.78,0.04,3,1.01,0,"1 nonsynonymous","F126V",1
"lib2","SARS-CoV-2","ATTATATTTATACTTA",4,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H N13H T46A S108A L162R",5
"lib2","SARS-CoV-2","ATTATATTTCAAAGCC",6,18.45,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","T3A L95Y L122P S139R",4
"lib2","SARS-CoV-2","ATTATCAAACGCACTT",1,16.87,10.84,0,0.07,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATCAAAGTAACAA",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60N E135L",2
"lib2","SARS-CoV-2","ATTATCAAATGACAGC",11,105.32,10.5,-0.34,0.06,2.89,1.04,0,">1 nonsynonymous","S45H L60H I104L",3
"lib2","SARS-CoV-2","ATTATCAACAATAATT",7,56.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90V N107W",2
"lib2","SARS-CoV-2","ATTATCAACAGAACAA",14,67.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C D90N T100E Q176E F185S",5
"lib2","SARS-CoV-2","ATTATCAACAGAAGTC",1,14.34,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","L57N Y165S",2
"lib2","SARS-CoV-2","ATTATCAACCCGCTTC",1,7.15,8.69,-2.15,0.22,2.44,1,0.02,">1 nonsynonymous","K87I K94F Y119P",3
"lib2","SARS-CoV-2","ATTATCAACTGATAGT",8,71.79,10.8,-0.03,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATCAACTGGTAAG",3,22.75,9.3,-1.54,0.31,1.5,1.16,0.07,">1 nonsynonymous","N13S N30T Y121N S200L",4
"lib2","SARS-CoV-2","ATTATCAAGACTTATA",9,60.74,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F44R A81T K94C Q163G",4
"lib2","SARS-CoV-2","ATTATCAATAAGTATG",16,356.03,10.2,-0.64,0.04,2.68,1.02,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","ATTATCAATTCCTTAA",2,61.83,10.82,-0.02,0.05,2.81,1.15,0,"1 nonsynonymous","F62V",1
"lib2","SARS-CoV-2","ATTATCACAAACAGAA",4,94.02,10.83,0,0.06,2.91,1.09,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","ATTATCACAGGTGTAA",11,199.41,10.62,-0.22,0.04,2.94,1.05,0,">1 nonsynonymous","T15A S36T",2
"lib2","SARS-CoV-2","ATTATCACGCAATATA",4,120.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y123D P149F",2
"lib2","SARS-CoV-2","ATTATCACTTGTATCG",8,22.41,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","N13G D98L C150S",3
"lib2","SARS-CoV-2","ATTATCAGGCAGATTG",35,253.93,6,-4.84,1.75,1.5,1.17,0.01,">1 nonsynonymous","A14S G101L",2
"lib2","SARS-CoV-2","ATTATCATCATCAAGT",5,68.41,6,-4.84,1.95,1.5,1.13,0.02,">1 nonsynonymous","Y91L A105L Y165L",3
"lib2","SARS-CoV-2","ATTATCATTTAAAAGC",9,16.8,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C6S N58K F99Q N107V",4
"lib2","SARS-CoV-2","ATTATCCAAAAAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S69Q G83M V103R N107* F160C T201L",6
"lib2","SARS-CoV-2","ATTATCCAGTACTGCG",1,11.44,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N64C G74S L131C T140P",4
"lib2","SARS-CoV-2","ATTATCCATGAAACTA",3,44.09,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y119T F167D",2
"lib2","SARS-CoV-2","ATTATCCCGTTTGAGA",1,10.85,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","E10V C49M E76M K94F",4
"lib2","SARS-CoV-2","ATTATCCCTAGGAATT",9,54.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D59C F99T",2
"lib2","SARS-CoV-2","ATTATCCTAGAGGCAG",9,4.53,NA,NA,NA,NA,NA,NA,"stop","F99M V103T L131* P149Y",4
"lib2","SARS-CoV-2","ATTATCCTATCAAACA",2,148.38,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L5T F167V N171T Q176L",4
"lib2","SARS-CoV-2","ATTATCCTGAAATTTC",6,83.29,9.56,-1.28,0.09,2.16,1.11,0,">1 nonsynonymous","D34L E154C",2
"lib2","SARS-CoV-2","ATTATCGAAATGTAAG",3,11.12,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6A T63L A89T T140S N157T",5
"lib2","SARS-CoV-2","ATTATCGAACTAAGAA",4,90.74,10.53,-0.31,0.04,2.97,1.02,0,"1 nonsynonymous","E135S",1
"lib2","SARS-CoV-2","ATTATCGACACAAGAT",7,7.18,8.19,-2.65,0.55,1.73,1,0.03,">1 nonsynonymous","F70L D97N L188W",3
"lib2","SARS-CoV-2","ATTATCGACACAGACA",10,7.24,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20K V32R I80L K114N",4
"lib2","SARS-CoV-2","ATTATCGACTCGCTCA",3,135.8,10.71,-0.12,0.02,2.99,1.01,0,">1 nonsynonymous","T55D Q144K",2
"lib2","SARS-CoV-2","ATTATCGATCACTACC",9,105.56,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y35S W106A F134T N157S G172S",5
"lib2","SARS-CoV-2","ATTATCGCAGTCCTGA",1,31.04,10.57,-0.27,0.03,2.93,1.07,0,">1 nonsynonymous","D98V S200F",2
"lib2","SARS-CoV-2","ATTATCGCTAATAGAC",10,168.89,9.68,-1.16,0.02,2.93,1.08,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","ATTATCGGTTTACGAG",5,235.8,10.83,-0.01,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATCTAAAGACAGC",9,5.95,NA,NA,NA,NA,NA,NA,"stop","C61G N118* L125I",3
"lib2","SARS-CoV-2","ATTATCTAAGGATCTG",6,92.54,9.84,-1,0.04,2.83,1,0,"1 nonsynonymous","P161G",1
"lib2","SARS-CoV-2","ATTATCTGCGTAAACT",10,96.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9S A14K N30E F99L S139C F156H Y165F",7
"lib2","SARS-CoV-2","ATTATCTTATATGGCG",1,14.7,10.08,-0.76,0.14,2.29,1.03,0.01,">1 nonsynonymous","L38T N64Q F160K",3
"lib2","SARS-CoV-2","ATTATCTTTACCCGTG",7,167.86,6.92,-3.92,0.14,1.5,1.1,0,">1 nonsynonymous","C150Q V153N",2
"lib2","SARS-CoV-2","ATTATGAAATGATTTA",5,54.86,9.9,-0.93,0.09,2.11,1.07,0,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","ATTATGAATTGACGAT",5,45.06,10,-0.84,0.06,2.72,1,0,">1 nonsynonymous","W106F Q144R",2
"lib2","SARS-CoV-2","ATTATGACCACACCGT",8,65.36,10.65,-0.18,0.05,3,1.01,0,">1 nonsynonymous","Y35V D97H",2
"lib2","SARS-CoV-2","ATTATGACCCAAATCG",7,36.25,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3L G152L Y165V R179M",4
"lib2","SARS-CoV-2","ATTATGACGAAAATCC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","Q79R D98* Q176M",3
"lib2","SARS-CoV-2","ATTATGAGCACGACGA",2,21.18,10.46,-0.37,0.08,2.8,1.13,0,">1 nonsynonymous","N1K E10K S129G",3
"lib2","SARS-CoV-2","ATTATGAGCATGCCTG",3,136.11,9.78,-1.06,0.06,2.58,1.11,0,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","ATTATGATTAAAATGG",17,156.4,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6N G86M F134N E141I",4
"lib2","SARS-CoV-2","ATTATGCAATTACGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1R G166* T170N K198* T201N",5
"lib2","SARS-CoV-2","ATTATGCACGTATGCA",3,47.15,6.65,-4.19,0.31,1.5,1.13,0.02,">1 nonsynonymous","G83D I104L Y121R",3
"lib2","SARS-CoV-2","ATTATGCATCTAACGC",14,113.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C49P D98V R124P K132T I142T",5
"lib2","SARS-CoV-2","ATTATGCATCTACAGG",5,50.72,10.31,-0.52,0.06,2.9,1.04,0,"1 nonsynonymous","F134K",1
"lib2","SARS-CoV-2","ATTATGCATCTTTAAC",2,18.41,8.97,-1.87,0.1,2.69,1.2,0.01,">1 nonsynonymous","F62A G83S G166I Y178H",4
"lib2","SARS-CoV-2","ATTATGCATTATAACA",4,27.94,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","F8T A18P D137H G155S",4
"lib2","SARS-CoV-2","ATTATGCCTAATACAT",5,43.3,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","A42R Q144L C150K P161T S184N",5
"lib2","SARS-CoV-2","ATTATGCGGAACAACG",1,78.59,10.19,-0.65,0.07,2.78,1.03,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","ATTATGGAGGCCAAGA",11,104.81,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V52W S69G T85S Y121G",4
"lib2","SARS-CoV-2","ATTATGGTTCTTTGAA",9,39.56,NA,NA,NA,NA,NA,NA,"stop","S29* N58P D90N F99D E154G",5
"lib2","SARS-CoV-2","ATTATGTACATATATG",11,22.2,6.16,-4.68,0.89,1.5,1.12,0.02,">1 nonsynonymous","A42S F70I N92D G155H V181S",5
"lib2","SARS-CoV-2","ATTATGTACCTACCAA",9,62.45,8.3,-2.54,0.09,2.86,1.09,0,">1 nonsynonymous","N1L F8L S43H Y175M K199L",5
"lib2","SARS-CoV-2","ATTATGTTAACCATTG",6,88.05,10.81,-0.03,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTATGTTAAGATAGT",3,101.07,8.16,-2.68,0.12,2.85,1.02,0.01,">1 nonsynonymous","G83L T85K L125D",3
"lib2","SARS-CoV-2","ATTATGTTGTCATAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K56M K94A T148P E154M S200*",5
"lib2","SARS-CoV-2","ATTATTAAAGAGAACG",9,0.93,NA,NA,NA,NA,NA,NA,"stop","N24L Y35I L57* G83F A89V F156T",6
"lib2","SARS-CoV-2","ATTATTAAAGTCATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S53R L95P G101S L131*",4
"lib2","SARS-CoV-2","ATTATTAACAGGGAGT",2,8.68,NA,NA,NA,NA,NA,NA,"stop","Y39Q K132* N171S",3
"lib2","SARS-CoV-2","ATTATTAACGCAAAAT",1,7.96,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","Y50L G152T",2
"lib2","SARS-CoV-2","ATTATTAATACATACT",3,127.5,10.7,-0.13,0.04,2.92,1.08,0,">1 nonsynonymous","I2L S184I",2
"lib2","SARS-CoV-2","ATTATTAATTCCTATG",11,179.53,10.83,0,0.03,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTATTACAAAGTATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85K E135G C158F",3
"lib2","SARS-CoV-2","ATTATTACCACTTATA",2,42.5,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S41I T55M N107R L122F Y143N",5
"lib2","SARS-CoV-2","ATTATTACCATGGGTA",4,16.28,8.49,-2.34,0.13,2.27,1.04,0.01,">1 nonsynonymous","Y39C I138E G146F",3
"lib2","SARS-CoV-2","ATTATTACCTCTTAAA",1,83.14,10.8,-0.04,0.06,2.93,1.09,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","ATTATTACGATAAAAT",2,13.4,9.06,-1.77,0.18,1.93,1.12,0.01,">1 nonsynonymous","D112I Q144P",2
"lib2","SARS-CoV-2","ATTATTACTTTCACAT",5,1.96,NA,NA,NA,NA,NA,NA,"stop","R16I K56P P82T A89Q C158T N171I P177*",7
"lib2","SARS-CoV-2","ATTATTAGACATCCGG",3,48.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88L G146L E154D",3
"lib2","SARS-CoV-2","ATTATTAGCGAGTAAT",1,8.32,8.93,-1.9,0.16,1.92,1.17,0.01,">1 nonsynonymous","C61T P133L",2
"lib2","SARS-CoV-2","ATTATTATCCCACAAC",7,1.38,NA,NA,NA,NA,NA,NA,"stop","A14* C61V Y91R F99I P197S",5
"lib2","SARS-CoV-2","ATTATTATGAAAGTTA",7,191.2,10.35,-0.49,0.04,2.89,1.04,0,">1 nonsynonymous","N13G V37P",2
"lib2","SARS-CoV-2","ATTATTATGGGACATG",1,25.57,9.95,-0.88,0.11,2.5,1,0.01,">1 nonsynonymous","Q84M Y91T",2
"lib2","SARS-CoV-2","ATTATTCAAGACCGGT",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G R25G N64Q S69R N110V",5
"lib2","SARS-CoV-2","ATTATTCACTGGGAGA",12,102.83,8.38,-2.45,0.21,1.76,1.18,0.02,">1 nonsynonymous","A89Y G166Q",2
"lib2","SARS-CoV-2","ATTATTCAGAAATCGA",2,42.43,7.96,-2.87,0.28,1.5,1.13,0.02,">1 nonsynonymous","S113Y N120V T140R",3
"lib2","SARS-CoV-2","ATTATTCAGACCAACT",1,19.5,6,-4.84,2,3,1.11,0,">1 nonsynonymous","E10L T15G C150F Y165M",4
"lib2","SARS-CoV-2","ATTATTCCATCTGGTA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","K56G Y93* G146S P197Q",4
"lib2","SARS-CoV-2","ATTATTCGCCCCCAAG",4,40.11,8.02,-2.82,0.25,1.53,1.1,0.02,">1 nonsynonymous","F44T A67F D98E L125V",4
"lib2","SARS-CoV-2","ATTATTCTAATCAGAA",3,38.27,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","D90S A105F S139V",3
"lib2","SARS-CoV-2","ATTATTCTCAATACAG",2,23.35,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","C6I Y35F K56L D68Q G86F W106G G117W T170Q",8
"lib2","SARS-CoV-2","ATTATTGAACATGACC",5,60.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19L N107V Q144H",3
"lib2","SARS-CoV-2","ATTATTGACACAAACC",29,155.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3A L125G D137S C150R",4
"lib2","SARS-CoV-2","ATTATTGACACGAATC",4,26.86,8.09,-2.75,0.29,1.74,1.15,0.02,">1 nonsynonymous","G9C F17M C61K T148P",4
"lib2","SARS-CoV-2","ATTATTGACCGATTAA",1,6.84,10.8,-0.04,0.05,2.97,1.07,0,">1 nonsynonymous","N13D L122K",2
"lib2","SARS-CoV-2","ATTATTGATAAATAAT",2,1.64,NA,NA,NA,NA,NA,NA,"stop","N120* A145F L183S",3
"lib2","SARS-CoV-2","ATTATTGATAGTCATC",7,107.4,9.88,-0.95,0.07,2.15,1.05,0,"1 nonsynonymous","S69L",1
"lib2","SARS-CoV-2","ATTATTGATTAACCGC",1,9.79,10.55,-0.29,0.1,2.92,1.14,0,">1 nonsynonymous","L5M K199T",2
"lib2","SARS-CoV-2","ATTATTGTACCATTCT",7,46.29,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T85M D112K Y119S",3
"lib2","SARS-CoV-2","ATTATTGTGAAACGTA",1,9.44,9.94,-0.9,0.04,3,1,0,">1 nonsynonymous","K114N R136H",2
"lib2","SARS-CoV-2","ATTATTGTTGGCACTT",6,157.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60A R73P Y91D I138L P177H",5
"lib2","SARS-CoV-2","ATTATTTACTTGATAA",2,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T V11T A33S T55P Y93S I104S L187R",7
"lib2","SARS-CoV-2","ATTATTTCCGAGGAAA",3,19.13,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G86V Y121G N171H Q176L",4
"lib2","SARS-CoV-2","ATTATTTTCTATCCAA",4,0,NA,NA,NA,NA,NA,NA,"stop","S200*",1
"lib2","SARS-CoV-2","ATTCAAAAAATCAAAT",1,6.63,6,-4.84,1.33,3,1.11,0.01,">1 nonsynonymous","D34E S53Y L60S A81T",4
"lib2","SARS-CoV-2","ATTCAAAACGAAAACA",4,45.77,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D98L C158Y",2
"lib2","SARS-CoV-2","ATTCAAACACGCTAGA",1,34.84,10.73,-0.11,0.06,2.87,1.16,0,"1 nonsynonymous","S184V",1
"lib2","SARS-CoV-2","ATTCAAACCACTAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S F156*",2
"lib2","SARS-CoV-2","ATTCAAACCCAAATTC",14,2.89,NA,NA,NA,NA,NA,NA,"stop","C6F V37* N118V G146A F160Y V173S",6
"lib2","SARS-CoV-2","ATTCAAACCCCGACAT",9,19.23,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F8L A14F S19E P133S V181K T201S",6
"lib2","SARS-CoV-2","ATTCAAACGCATTCGA",1,7.91,6.73,-4.11,1.44,1.5,1.08,0.04,">1 nonsynonymous","T3I Q84N D98T S139L",4
"lib2","SARS-CoV-2","ATTCAAACGTATGGAT",2,142.02,8.42,-2.41,0.04,2.79,1.07,0,">1 nonsynonymous","C6Y Y119T",2
"lib2","SARS-CoV-2","ATTCAAACGTGCCATA",6,42.98,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K48E K56F S108I Y119G",4
"lib2","SARS-CoV-2","ATTCAAAGAAAAGACA",8,57.07,9.5,-1.33,0.13,1.93,1.06,0.01,">1 nonsynonymous","K94V N151F",2
"lib2","SARS-CoV-2","ATTCAAAGACTCTGCA",10,153.07,8.67,-2.17,0.08,2.81,1.04,0,">1 nonsynonymous","Y119I G152T",2
"lib2","SARS-CoV-2","ATTCAAAGAGAAGAAG",6,45.35,10.42,-0.41,0.05,2.99,1,0,">1 nonsynonymous","K114E E141L",2
"lib2","SARS-CoV-2","ATTCAAAGGCCAAAAT",1,11.96,9.91,-0.92,0.12,2.11,1,0.01,">1 nonsynonymous","I2A W23P K128P",3
"lib2","SARS-CoV-2","ATTCAAAGGTCCAAAG",14,31.64,6,-4.84,2,3,1.2,0,">1 nonsynonymous","D90H F99E F160R G174L",4
"lib2","SARS-CoV-2","ATTCAAAGTAAAGGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60* K199I",2
"lib2","SARS-CoV-2","ATTCAAATAATATAGG",8,177.98,10.75,-0.09,0.03,2.9,1.09,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","ATTCAAATACTTAGCA",6,70.18,6.32,-4.51,0.5,1.5,1.16,0.02,">1 nonsynonymous","G117F R136Y",2
"lib2","SARS-CoV-2","ATTCAAATCCCGGCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S43K K56* G83L",3
"lib2","SARS-CoV-2","ATTCAAATCGCAGGTC",6,33.21,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","C6R S45W S108N L162P",4
"lib2","SARS-CoV-2","ATTCAAATCTAACCAG",10,139.91,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V11R V115D L125R G155L",4
"lib2","SARS-CoV-2","ATTCAAATTAAAAGAA",6,98.82,10.87,0.03,0.05,2.98,1.04,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","ATTCAAATTAACAAAT",2,76.37,8.48,-2.36,0.15,2.04,1.12,0.01,">1 nonsynonymous","K48R N118I Q144K",3
"lib2","SARS-CoV-2","ATTCAAATTCATGGAA",9,76.07,9.07,-1.77,0.06,2.86,1.15,0,">1 nonsynonymous","N64L F126Y",2
"lib2","SARS-CoV-2","ATTCAAATTTTTGTGA",5,111.89,10.79,-0.05,0.06,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCAACAAAAACTCA",2,9.17,9.59,-1.25,0.27,2.25,1.07,0.02,">1 nonsynonymous","A89V T140C T148D",3
"lib2","SARS-CoV-2","ATTCAACAATAACGTA",5,69.85,10.9,0.07,0.06,3,1,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","ATTCAACCCTTAACAG",5,11.59,10.84,0,0.1,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCAACCGGTGTAAG",5,2.66,NA,NA,NA,NA,NA,NA,"stop","K56E W106L P149*",3
"lib2","SARS-CoV-2","ATTCAACGACCAAACC",8,1.95,NA,NA,NA,NA,NA,NA,"stop","Y39G D90T G101Y N107R S113* C150Y T201V",7
"lib2","SARS-CoV-2","ATTCAACGCTATGTGC",3,46.33,7.64,-3.2,0.27,1.5,1.18,0.02,">1 nonsynonymous","D59M L162N T201W",3
"lib2","SARS-CoV-2","ATTCAACGGTAGATTA",9,1.52,NA,NA,NA,NA,NA,NA,"stop","N1I G9A N58H I88* V103H Y159* S184N",7
"lib2","SARS-CoV-2","ATTCAACGTAACCATC",1,39.9,10.68,-0.16,0.04,3,1.01,0,">1 nonsynonymous","N1P G155S",2
"lib2","SARS-CoV-2","ATTCAACGTGACCCGA",3,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A Q84R D97Y N109M Y121K K128W",6
"lib2","SARS-CoV-2","ATTCAACTAGATAAAA",2,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y N64T",2
"lib2","SARS-CoV-2","ATTCAACTGCAGTCGC",10,2.63,NA,NA,NA,NA,NA,NA,"stop","R73S A105* N110Y",3
"lib2","SARS-CoV-2","ATTCAACTTTATAACA",10,175.8,10.53,-0.3,0.04,2.94,1.05,0,">1 nonsynonymous","D97Q G116K",2
"lib2","SARS-CoV-2","ATTCAAGAATAAAACG",3,38.56,10.57,-0.27,0.07,2.84,1.16,0,">1 nonsynonymous","N13H P197T",2
"lib2","SARS-CoV-2","ATTCAAGATCAATTCC",6,62.38,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S45H C102M T140F C150S G166S",5
"lib2","SARS-CoV-2","ATTCAAGCAGTACCAG",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F G51C T201V",3
"lib2","SARS-CoV-2","ATTCAAGGAAGCTAAA",1,12.56,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V77S N120W I138H",3
"lib2","SARS-CoV-2","ATTCAAGTATCACCCA",6,275.36,10.47,-0.37,0.03,2.92,1.07,0,">1 nonsynonymous","S45H K56V",2
"lib2","SARS-CoV-2","ATTCAAGTCTTAGGCA",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E D59A T85C Y91W T201S",5
"lib2","SARS-CoV-2","ATTCAAGTTCTGAGAA",12,280.17,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49S G117D",2
"lib2","SARS-CoV-2","ATTCAATAAAAAAGGA",18,152.25,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","R25S V71Q",2
"lib2","SARS-CoV-2","ATTCAATAAAATATGT",17,403.29,9.96,-0.88,0.07,2.46,1.05,0,">1 nonsynonymous","Q84L Y178W A192L",3
"lib2","SARS-CoV-2","ATTCAATAAACTTTTA",9,137.81,10.15,-0.69,0.05,2.73,1.05,0,">1 nonsynonymous","T46S L122A P133A I142Y",4
"lib2","SARS-CoV-2","ATTCAATAAGATAAAG",3,64.67,10.87,0.04,0.08,2.92,1.1,0,"1 nonsynonymous","A190T",1
"lib2","SARS-CoV-2","ATTCAATAATCCCTAA",3,16.09,9.38,-1.45,0.16,2.59,1,0.01,">1 nonsynonymous","N64T K114E Y121V S129G",4
"lib2","SARS-CoV-2","ATTCAATAGGACATCA",3,21.73,7.08,-3.76,0.44,1.53,1.12,0.07,">1 nonsynonymous","G9K Y39L N58G P96A S108G",5
"lib2","SARS-CoV-2","ATTCAATATTCAAATG",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I V103R",2
"lib2","SARS-CoV-2","ATTCAATCTAGAATAC",3,2.51,NA,NA,NA,NA,NA,NA,"stop","I88T D98R Y143* V153I Y178S",5
"lib2","SARS-CoV-2","ATTCAATGGACGACAG",2,12.33,10.12,-0.72,0.09,2.53,1.01,0.01,">1 nonsynonymous","L60R D75Q E141T V153K S184F",5
"lib2","SARS-CoV-2","ATTCAATGTAATAGTG",8,95.28,7.59,-3.25,0.17,1.53,1.12,0.01,">1 nonsynonymous","C6Y A145P",2
"lib2","SARS-CoV-2","ATTCAATTCACACGTA",3,19.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W D98L L183M",3
"lib2","SARS-CoV-2","ATTCAATTCCACCAGA",1,9.13,8.88,-1.95,0.18,1.5,1.17,0.03,"1 nonsynonymous","C49H",1
"lib2","SARS-CoV-2","ATTCAATTCTCCAGTG",2,12.16,9.73,-1.1,0.39,1.56,1.34,0.07,">1 nonsynonymous","A42K Y91M L131F S200K",4
"lib2","SARS-CoV-2","ATTCAATTGCCATTAG",2,11.82,11.43,0.59,0.15,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCACAAATTTAGAT",5,0.52,NA,NA,NA,NA,NA,NA,"stop","R73F G117*",2
"lib2","SARS-CoV-2","ATTCACAACGATGATA",4,2.45,NA,NA,NA,NA,NA,NA,"stop","G9M T148*",2
"lib2","SARS-CoV-2","ATTCACAATATAAATA",2,19.4,8.88,-1.96,0.12,2.13,1.03,0.01,">1 nonsynonymous","D34A K87T R127G",3
"lib2","SARS-CoV-2","ATTCACAATTCAAATT",2,9.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119Q G172F F185T",3
"lib2","SARS-CoV-2","ATTCACACACAAGATT",7,127.81,6.04,-4.8,0.46,1.5,1.17,0,">1 nonsynonymous","Y35M F62I G172D A190N",4
"lib2","SARS-CoV-2","ATTCACAGACGATACA",6,47.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V37L F99P L162Y",3
"lib2","SARS-CoV-2","ATTCACAGTATCTGCA",3,105,10.63,-0.21,0.04,2.94,1.06,0,">1 nonsynonymous","N4A S29I T201L",3
"lib2","SARS-CoV-2","ATTCACATCAGGAAAT",1,33.28,10.4,-0.43,0.03,2.92,1.05,0,">1 nonsynonymous","I2A P7F",2
"lib2","SARS-CoV-2","ATTCACATTTTACCCG",4,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N K87I Y93L N107K",4
"lib2","SARS-CoV-2","ATTCACCAAACAAAAC",4,75.62,10.78,-0.06,0.04,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCACCCATGAGCTA",15,4.6,NA,NA,NA,NA,NA,NA,"stop","C61R Y178*",2
"lib2","SARS-CoV-2","ATTCACCCGACTTGGA",15,126.13,8.45,-2.38,0.18,1.5,1.08,0.01,">1 nonsynonymous","A18V S41G Q163Y G174I",4
"lib2","SARS-CoV-2","ATTCACCCTACATATA",9,11.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3P N24W D90L P149S",4
"lib2","SARS-CoV-2","ATTCACCGAATGCTAA",5,54.41,10.12,-0.72,0.1,2.26,1.06,0,">1 nonsynonymous","S45H G51R Y91F T100N",4
"lib2","SARS-CoV-2","ATTCACCGGACATAAT",3,53.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11P I28Y P54S K87E E141R P149T",6
"lib2","SARS-CoV-2","ATTCACCGTTAGATAA",6,43.79,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8V F17C Y35T A105F T170R G196Q",6
"lib2","SARS-CoV-2","ATTCACCTGACGAGGG",6,55.96,9.85,-0.99,0.08,2.16,1.08,0,">1 nonsynonymous","D59S E76L",2
"lib2","SARS-CoV-2","ATTCACGAGACCAAAA",2,1.28,NA,NA,NA,NA,NA,NA,"stop","C61S Y91*",2
"lib2","SARS-CoV-2","ATTCACGATTTATGTT",1,8.17,10.43,-0.41,0.15,2.73,1.06,0.01,">1 nonsynonymous","N13H N64R",2
"lib2","SARS-CoV-2","ATTCACGGAAACTAAT",4,46.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R73P G86V W106V N118S",4
"lib2","SARS-CoV-2","ATTCACGGCCCCATTT",2,44.63,9.7,-1.14,0.04,1.95,1.02,0,">1 nonsynonymous","P82Q D98N",2
"lib2","SARS-CoV-2","ATTCACTATGAAGGGT",8,186.95,10.52,-0.31,0.05,2.92,1.07,0,"1 nonsynonymous","Y35T",1
"lib2","SARS-CoV-2","ATTCACTGAACTACAC",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L L60K E135N",3
"lib2","SARS-CoV-2","ATTCACTGACAACCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T100H N107P G152*",3
"lib2","SARS-CoV-2","ATTCACTTAATGTACA",7,111.61,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S41A G86L V115W I142R Y159H",5
"lib2","SARS-CoV-2","ATTCACTTCCTTTCTC",4,31.54,7.47,-3.37,0.47,1.5,1.17,0.06,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","ATTCACTTGATACCAG",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S C49L L122R N130L A190V",5
"lib2","SARS-CoV-2","ATTCAGAAACAGCATA",6,46.06,7.48,-3.35,0.24,1.5,1.13,0.01,"1 nonsynonymous","D68I",1
"lib2","SARS-CoV-2","ATTCAGAAAGAACAGT",7,45.91,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S43D F62L Y121S Q144T L162A",5
"lib2","SARS-CoV-2","ATTCAGAAATTCGCCG",3,11.19,7.4,-3.43,0.2,2.22,1.05,0.01,">1 nonsynonymous","A14K A33F Q84L D90G T140I V153D G174E T201A",8
"lib2","SARS-CoV-2","ATTCAGAATAGCAAAT",6,121.42,10.73,-0.1,0.03,2.97,1.05,0,">1 nonsynonymous","K114R P149L",2
"lib2","SARS-CoV-2","ATTCAGACTAAAGACT",10,61.11,6,-4.84,1.13,1.5,1.11,0.01,">1 nonsynonymous","V103A T148D P161G P197R",4
"lib2","SARS-CoV-2","ATTCAGAGAACAGTGG",6,2.03,NA,NA,NA,NA,NA,NA,"stop","C49M K114* F160P",3
"lib2","SARS-CoV-2","ATTCAGAGTATTCCTA",9,138.77,10.62,-0.21,0.04,2.93,1.02,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","ATTCAGATAACTGTCA",1,28.81,9.96,-0.88,0.12,2.62,1,0.01,">1 nonsynonymous","G83V Y143F G152S",3
"lib2","SARS-CoV-2","ATTCAGATCAACGTCC",9,105.9,6.12,-4.71,0.61,1.5,1.14,0.01,">1 nonsynonymous","Y21I L57D T201L",3
"lib2","SARS-CoV-2","ATTCAGATTCAAGACT",2,17.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A I80L Y175K A190V",4
"lib2","SARS-CoV-2","ATTCAGCATAAAACAC",4,51.22,8.54,-2.3,0.08,2.68,1.08,0,">1 nonsynonymous","N4P R16Q R73E",3
"lib2","SARS-CoV-2","ATTCAGCATCAGAATG",3,32.85,10.47,-0.37,0.07,2.88,1.14,0,">1 nonsynonymous","K48S N151S",2
"lib2","SARS-CoV-2","ATTCAGCCATTGCCCC",4,16.67,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F44L D97C R127F A145G Y175S",5
"lib2","SARS-CoV-2","ATTCAGGAAAAAGGGC",4,51.34,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P96W L122V P149R G166L T201I",5
"lib2","SARS-CoV-2","ATTCAGGATAATACGG",3,18.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D59M T140A Y159W Y165F Y175E",5
"lib2","SARS-CoV-2","ATTCAGGATCTACTCC",4,48.46,10.81,-0.03,0.05,2.97,1.03,0,">1 nonsynonymous","Y39K T55G T100C",3
"lib2","SARS-CoV-2","ATTCAGGCCTCAATAT",6,248.19,9.3,-1.54,0.03,2.87,1.06,0,">1 nonsynonymous","N1P N120M T170R P191S",4
"lib2","SARS-CoV-2","ATTCAGGGTCAATCTA",2,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y F62S T85S K128Y E154H Y178S",6
"lib2","SARS-CoV-2","ATTCAGTAATCAAAAC",1,36.1,10.68,-0.15,0.04,2.96,1.04,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","ATTCAGTAGATCGACT",2,29.57,10.77,-0.07,0.04,3,1.01,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","ATTCAGTCAAAATAAC",3,58.29,8.23,-2.61,0.13,2.51,1.08,0.01,">1 nonsynonymous","R27A K114L P149I Y175N",4
"lib2","SARS-CoV-2","ATTCAGTCACAAAAAG",8,71.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G A14C W23L C49Y F99G R124A T170K",7
"lib2","SARS-CoV-2","ATTCAGTCACCCAATA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","N40* G83S T100I Y119I Y178V",5
"lib2","SARS-CoV-2","ATTCAGTCTCTCATCA",2,125.52,10.12,-0.71,0.05,2.8,1,0,">1 nonsynonymous","E10R D75R",2
"lib2","SARS-CoV-2","ATTCAGTCTTGGTCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* K26M Q168G",3
"lib2","SARS-CoV-2","ATTCAGTTAAATGAAG",6,46.41,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F62S F99S",2
"lib2","SARS-CoV-2","ATTCAGTTAGTAACCT",4,54.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A18L N107G K114G G146K",4
"lib2","SARS-CoV-2","ATTCAGTTTCTCCAGT",9,124.54,9.18,-1.66,0.04,2.94,1.04,0,">1 nonsynonymous","T46Y K87F Y119T",3
"lib2","SARS-CoV-2","ATTCATAAAAAAAGAT",4,78.09,10.79,-0.05,0.02,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCATAAAAGCTTGA",8,100.72,10.86,0.02,0.04,2.96,1.05,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","ATTCATAACAGTGCCA",15,66.78,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F8Y G51F A81S K128H G152R",5
"lib2","SARS-CoV-2","ATTCATAACGGTCATT",2,24.5,10.74,-0.1,0.05,2.91,1.04,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","ATTCATAATTGAATTT",3,23.25,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V11R A105F R179I",3
"lib2","SARS-CoV-2","ATTCATACAATTTTAT",3,17.52,6,-4.84,2,1.5,1.11,0.07,">1 nonsynonymous","R27M V37I R73I E135A",4
"lib2","SARS-CoV-2","ATTCATACCAATCAAA",4,28.22,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R25H Y93A Q168D",3
"lib2","SARS-CoV-2","ATTCATAGAACTAAAA",1,18.58,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","W23L C49L",2
"lib2","SARS-CoV-2","ATTCATAGCTGCCCTT",5,86.21,10.72,-0.12,0.03,2.97,1.04,0,">1 nonsynonymous","P149L C195I",2
"lib2","SARS-CoV-2","ATTCATAGGGATTCCT",6,48.2,9.52,-1.31,0.09,1.88,1.04,0.01,">1 nonsynonymous","V37C V182T",2
"lib2","SARS-CoV-2","ATTCATAGGTGAGCTC",3,67.8,8.99,-1.85,0.06,2.97,1.07,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","ATTCATATAATATGTG",7,62.48,10.83,-0.01,0.05,2.97,1.03,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","ATTCATATCTATGCCG",1,6.08,7.37,-3.46,0.42,1.93,1.11,0.01,">1 nonsynonymous","I88T S147H G174T",3
"lib2","SARS-CoV-2","ATTCATATGCAGACCA",2,103.66,9.49,-1.34,0.07,2,1.06,0,">1 nonsynonymous","F99I K114N",2
"lib2","SARS-CoV-2","ATTCATATTAACAAAC",1,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21R F44I P161W",3
"lib2","SARS-CoV-2","ATTCATATTGTTACAG",3,30.65,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L5Y I28S C102G",3
"lib2","SARS-CoV-2","ATTCATCAAAAAAAGG",3,78.71,10.38,-0.45,0.03,2.89,1.1,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","ATTCATCAGGCATGCA",2,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T A42L Y50I K128S V153K",5
"lib2","SARS-CoV-2","ATTCATCCGAAACAAA",1,31.36,10.66,-0.17,0.05,3,1,0,">1 nonsynonymous","N151G E186K",2
"lib2","SARS-CoV-2","ATTCATCCGCGTAGAC",2,7.67,10.02,-0.81,0.47,2.92,1.12,0.01,">1 nonsynonymous","F44I D75G",2
"lib2","SARS-CoV-2","ATTCATCCGGGATACT",7,146.96,10.61,-0.23,0.05,2.94,1.02,0,">1 nonsynonymous","S29W T55L",2
"lib2","SARS-CoV-2","ATTCATCGACTTTATA",1,5.21,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G101D Y165G",2
"lib2","SARS-CoV-2","ATTCATCTAAAACAAC",2,35.2,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","K114P P133E N151P",3
"lib2","SARS-CoV-2","ATTCATCTATCATATA",1,3.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136F",1
"lib2","SARS-CoV-2","ATTCATCTCAGTTGAT",10,124.89,10.13,-0.7,0.05,2.7,1.03,0,"1 nonsynonymous","V180L",1
"lib2","SARS-CoV-2","ATTCATCTGGCCATCC",1,30.64,10.74,-0.1,0.06,2.95,1.1,0,"1 nonsynonymous","K132C",1
"lib2","SARS-CoV-2","ATTCATGAACACTTAA",5,81.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F62N G86Y E141D L162A",4
"lib2","SARS-CoV-2","ATTCATGAAGCGTAAC",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P S36Q Y50E G74V D98V",5
"lib2","SARS-CoV-2","ATTCATGATATCTAAC",7,94.1,10.9,0.06,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCATGGAGGACTAG",2,74.47,9.84,-0.99,0.04,2.8,1.04,0,">1 nonsynonymous","C6V N24H",2
"lib2","SARS-CoV-2","ATTCATGTCTACGCAG",2,18.24,10.45,-0.39,0.08,2.91,1.01,0.01,">1 nonsynonymous","F44T P54Y",2
"lib2","SARS-CoV-2","ATTCATGTTGGAAATC",3,2.35,NA,NA,NA,NA,NA,NA,"stop","V11S T55S Q79* K132N",4
"lib2","SARS-CoV-2","ATTCATTACTCGGATT",3,21.45,10.14,-0.69,0.12,2.58,1.1,0.01,">1 nonsynonymous","F62I G83V",2
"lib2","SARS-CoV-2","ATTCATTATATCACAG",2,10.19,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","N1S V37G I80E P133G V153S Q168R",6
"lib2","SARS-CoV-2","ATTCATTGAAGTATTA",2,24.32,10.99,0.16,0.07,2.97,1,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","ATTCATTTAGTAAGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","P82S G146*",2
"lib2","SARS-CoV-2","ATTCATTTATCATAAG",1,28.99,10.17,-0.67,0.08,2.2,1.12,0,">1 nonsynonymous","L5H Y21M A190V",3
"lib2","SARS-CoV-2","ATTCATTTCTATATCC",3,37.17,10.8,-0.04,0.07,2.86,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCCAAAAAGTGAAC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y D34T C61A Y121L N151K Q168F",6
"lib2","SARS-CoV-2","ATTCCAAATTTGAGTG",2,32.74,10.46,-0.38,0.05,2.85,1.15,0,">1 nonsynonymous","G9H S19A",2
"lib2","SARS-CoV-2","ATTCCAACATTAAACC",11,64.36,6.21,-4.63,0.77,1.5,1.22,0.02,">1 nonsynonymous","P7F T46S K94L S129D",4
"lib2","SARS-CoV-2","ATTCCAACCCACAATT",3,7.26,NA,NA,NA,NA,NA,0.43,"1 nonsynonymous","L95Q",1
"lib2","SARS-CoV-2","ATTCCAATACAACAAT",5,292.24,10.71,-0.13,0.04,2.97,1.05,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","ATTCCAATCGTAAAAG",7,26.87,7.36,-3.48,0.4,1.5,1.09,0.04,">1 nonsynonymous","N58T L183A",2
"lib2","SARS-CoV-2","ATTCCAATGAATCGAA",2,8.84,10.27,-0.56,0.15,2.29,1,0.01,">1 nonsynonymous","Y66N P96R P197S",3
"lib2","SARS-CoV-2","ATTCCAATGGGATCGT",3,17.91,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N107Y K114R",2
"lib2","SARS-CoV-2","ATTCCAATTTATAAAC",7,143.59,10.9,0.07,0.05,2.93,1.09,0,">1 nonsynonymous","T148H P197V",2
"lib2","SARS-CoV-2","ATTCCACACCCGCTGT",7,3.13,NA,NA,NA,NA,NA,NA,"stop","S69N A81S Y175*",3
"lib2","SARS-CoV-2","ATTCCACATCAATATC",2,35.65,9.03,-1.81,0.14,2.01,1.08,0.01,">1 nonsynonymous","N4T F44E N107S",3
"lib2","SARS-CoV-2","ATTCCACCCTAACTAG",5,2.28,NA,NA,NA,NA,NA,NA,"stop","Q84* T100M",2
"lib2","SARS-CoV-2","ATTCCACCTCACTACC",7,59.7,6.41,-4.43,0.47,1.5,1.19,0.02,">1 nonsynonymous","T55L C61P D90F I142R",4
"lib2","SARS-CoV-2","ATTCCACGCCGCGTCA",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F F99N Y123E",3
"lib2","SARS-CoV-2","ATTCCACTACTGGACC",3,26.9,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","V20R C49L Y119F S129P",4
"lib2","SARS-CoV-2","ATTCCACTATAATAGC",4,22.42,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G9P F99S",2
"lib2","SARS-CoV-2","ATTCCACTTTTTTTAT",5,41.47,9.87,-0.97,0.08,2.32,1.02,0,">1 nonsynonymous","Q84N L183F",2
"lib2","SARS-CoV-2","ATTCCAGAACCGAATT",1,27.63,10.29,-0.54,0.09,2.75,1.08,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","ATTCCAGAAGCAAAAA",6,104.33,10.48,-0.36,0.06,2.87,1.08,0,">1 nonsynonymous","E10L K132A",2
"lib2","SARS-CoV-2","ATTCCAGAATCACTGT",7,102.05,10.07,-0.77,0.07,2.27,1,0,">1 nonsynonymous","S41E V52N",2
"lib2","SARS-CoV-2","ATTCCAGACACACTCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179P",1
"lib2","SARS-CoV-2","ATTCCAGACAGATACG",6,7.56,NA,NA,NA,NA,NA,NA,"stop","K26S G116* Y119D F134S",4
"lib2","SARS-CoV-2","ATTCCAGACCTATACC",5,22.75,6.46,-4.37,0.8,1.5,1.4,0.05,">1 nonsynonymous","T100P T148A",2
"lib2","SARS-CoV-2","ATTCCAGATATGTACG",1,69.27,6.4,-4.43,0.39,1.62,1.17,0.01,">1 nonsynonymous","S113L Y119S T148Y",3
"lib2","SARS-CoV-2","ATTCCAGGGTTCGATG",17,146.74,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","E10G D75W T85M V173T",4
"lib2","SARS-CoV-2","ATTCCAGTAACCTACT",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72T N107Q R127F G174R",4
"lib2","SARS-CoV-2","ATTCCATAATTATACG",3,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K D59H I88K S129E T148S N151C P177A",7
"lib2","SARS-CoV-2","ATTCCATACTCCCATT",5,65.63,10.89,0.06,0.07,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCCATAGTTTTAGC",1,14.13,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","Y123P P149S G166A",3
"lib2","SARS-CoV-2","ATTCCATATTACCTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","ATTCCATGACAAGAAA",1,14.75,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R27V C49N",2
"lib2","SARS-CoV-2","ATTCCATGTTTAAAGA",9,86.27,9.71,-1.13,0.08,2.48,1.08,0,">1 nonsynonymous","G9R L38T V153T",3
"lib2","SARS-CoV-2","ATTCCATTATAGACTA",3,111.2,9.08,-1.75,0.05,2.65,1.08,0,">1 nonsynonymous","S69M T170K",2
"lib2","SARS-CoV-2","ATTCCCAAAATTCTGG",1,8.77,10.52,-0.31,0.1,2.97,1.01,0,"1 nonsynonymous","Q176N",1
"lib2","SARS-CoV-2","ATTCCCAACCGTCTCA",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91M D97V R136F T170L",4
"lib2","SARS-CoV-2","ATTCCCAAGCGCGCTT",5,110.67,10.49,-0.35,0.03,2.89,1.08,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","ATTCCCAATAGAACCG",8,50.3,9.14,-1.7,0.08,1.91,1.12,0,">1 nonsynonymous","Y21L L60K",2
"lib2","SARS-CoV-2","ATTCCCACAAATTAAG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","S36T N118R Q176T T201*",4
"lib2","SARS-CoV-2","ATTCCCACATCCACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49E Y121V E135S G172*",4
"lib2","SARS-CoV-2","ATTCCCACTACAAATC",2,24.8,6.35,-4.49,0.94,1.5,1.14,0.07,">1 nonsynonymous","K94T F99W A105R T148I",4
"lib2","SARS-CoV-2","ATTCCCAGGTGCTCAA",6,123.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55N Y119F R136L Q144C P149T",5
"lib2","SARS-CoV-2","ATTCCCAGTTACCGAA",3,14.91,8.77,-2.07,0.27,1.89,1.16,0.02,">1 nonsynonymous","T15A G155L N171C",3
"lib2","SARS-CoV-2","ATTCCCCAAAAATCAA",6,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A F47S K87N Y121Q",4
"lib2","SARS-CoV-2","ATTCCCCAGAATGCGT",2,79.48,10.63,-0.21,0.05,2.88,1.11,0,"1 nonsynonymous","Y178N",1
"lib2","SARS-CoV-2","ATTCCCCCTTCCACAA",3,40.02,10.85,0.01,0.06,2.99,1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCCCCGAGTTGACT",2,71.14,9.66,-1.17,0.07,1.94,1.03,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","ATTCCCCGCAACGTAT",10,77.79,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41E G51T A89R G101W Q163K",5
"lib2","SARS-CoV-2","ATTCCCCGTACCGCAA",5,21.09,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","P54T A81Y K132G N151Q Q176A",5
"lib2","SARS-CoV-2","ATTCCCCTTGTATACG",3,73.79,8.29,-2.55,0.08,2.11,1.06,0,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","ATTCCCGAGACATATG",6,36.34,10.84,0.01,0.07,2.98,1.01,0,"1 nonsynonymous","S200H",1
"lib2","SARS-CoV-2","ATTCCCGCACATTAGA",1,11.57,10.28,-0.55,0.11,2.94,1.05,0.01,">1 nonsynonymous","N1Y S129C T148A",3
"lib2","SARS-CoV-2","ATTCCCGGAGAACTTT",1,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D K132H",2
"lib2","SARS-CoV-2","ATTCCCGTAAAAGTCA",12,157.07,10.02,-0.82,0.04,2.68,1.06,0,"1 nonsynonymous","F17V",1
"lib2","SARS-CoV-2","ATTCCCTAAGGCCACA",13,203.07,10.71,-0.13,0.03,2.96,1.03,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","ATTCCCTACATTAGCG",6,2.76,NA,NA,NA,NA,NA,NA,"stop","S45* E141W",2
"lib2","SARS-CoV-2","ATTCCCTAGGTGACTA",1,15.04,10.08,-0.76,0.12,2.62,1.06,0.01,">1 nonsynonymous","T15A L60Q K128I",3
"lib2","SARS-CoV-2","ATTCCCTCAAGGGAAC",4,27.08,10.7,-0.13,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCCCTCTACAAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27G N40* N118P I142F T148S V181R",6
"lib2","SARS-CoV-2","ATTCCCTGGCTTCACC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","N30A S41* K94T",3
"lib2","SARS-CoV-2","ATTCCGAAACGTACTA",3,11.24,6,-4.84,2,3,1.03,0.01,">1 nonsynonymous","G86E P133T",2
"lib2","SARS-CoV-2","ATTCCGAAGTCGAGCT",5,28.8,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G86R Y91H",2
"lib2","SARS-CoV-2","ATTCCGACGTAGTAAA",7,80.57,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2S Y39L N92I Y123N",4
"lib2","SARS-CoV-2","ATTCCGAGCATCCGGG",3,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Q R78Y T148G",3
"lib2","SARS-CoV-2","ATTCCGAGGGCACTAT",8,61.01,10.85,0.02,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCCGATTTACCAAG",1,38.07,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","L95P Y178N",2
"lib2","SARS-CoV-2","ATTCCGCTCCTATATG",2,42.41,10.6,-0.24,0.06,2.91,1.03,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","ATTCCGCTTGCGCCAA",2,36.48,10.76,-0.08,0.07,2.92,1.08,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","ATTCCGGCCTTAATGG",16,58.2,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N30K C102R K114F",3
"lib2","SARS-CoV-2","ATTCCGGGCGATCTGG",3,33.35,10.36,-0.48,0.07,2.94,1.08,0,">1 nonsynonymous","F44A N110R",2
"lib2","SARS-CoV-2","ATTCCGGGGTTAACCG",1,0.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","ATTCCGGTCCGATAAG",1,27.38,9.71,-1.12,0.11,2.58,1.11,0.01,">1 nonsynonymous","I28L Y91S",2
"lib2","SARS-CoV-2","ATTCCGTATAAGACAA",1,34.84,6.57,-4.27,0.4,1.5,1.25,0.02,">1 nonsynonymous","N107S R136V G152D",3
"lib2","SARS-CoV-2","ATTCCGTATAAGGTGC",4,23.39,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C49F D68R I104N F156R Y165C",5
"lib2","SARS-CoV-2","ATTCCGTGAACAAATA",7,42.76,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N130C N157L S184P",3
"lib2","SARS-CoV-2","ATTCCGTGATGCAATT",3,6.08,6.72,-4.12,0.72,2.18,1.07,0.07,">1 nonsynonymous","N4S N92G A105R",3
"lib2","SARS-CoV-2","ATTCCGTGCAAAAACT",9,162.32,10.68,-0.15,0.02,2.93,1.08,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","ATTCCGTTCATAGGGA",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Q C102K",2
"lib2","SARS-CoV-2","ATTCCGTTCTAAGTCA",9,235.4,9.28,-1.56,0.05,2.67,1.05,0,">1 nonsynonymous","D90L I142V G174T",3
"lib2","SARS-CoV-2","ATTCCTACACGTGAGC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","R16Y V20L K56* R73E Y143L",5
"lib2","SARS-CoV-2","ATTCCTACATAAAGTA",1,5.52,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A67S T100F D112Y",3
"lib2","SARS-CoV-2","ATTCCTACGATGCGAC",11,93.84,10.93,0.1,0.05,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCCTACGCGTACAT",1,22.37,9.98,-0.86,0.15,2.64,1.11,0.01,">1 nonsynonymous","L5W K128N Y178L",3
"lib2","SARS-CoV-2","ATTCCTATAAGGAATG",6,35.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59V N92S G101I A105C P169A",5
"lib2","SARS-CoV-2","ATTCCTATCAGACGCC",2,34.81,10.79,-0.04,0.08,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCCTATGCAATATA",6,55.56,8.81,-2.03,0.16,1.81,1.15,0.01,">1 nonsynonymous","V65N Q84S I104L",3
"lib2","SARS-CoV-2","ATTCCTCTTCCATGGG",2,57.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G74T K87T F134L Q144F Y178I",5
"lib2","SARS-CoV-2","ATTCCTGACAAAGAGA",3,25.76,8.49,-2.34,0.23,1.5,1.05,0.01,">1 nonsynonymous","C6M F44V D98Y",3
"lib2","SARS-CoV-2","ATTCCTGATAGTCATA",8,98.25,9.09,-1.74,0.09,2.23,1.09,0,">1 nonsynonymous","K114A N120L G155V",3
"lib2","SARS-CoV-2","ATTCCTGATGTCCGTA",4,54.3,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D97A N120F L131A S139Y",4
"lib2","SARS-CoV-2","ATTCCTGCCTTGGTGA",11,256.5,10.63,-0.21,0.03,2.94,1.08,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","ATTCCTGCGGGCGATG",7,16.06,9.07,-1.77,0.18,1.83,1.08,0.01,"1 nonsynonymous","V77W",1
"lib2","SARS-CoV-2","ATTCCTGGAATAAAAT",5,16.35,6,-4.84,2,1.5,1.07,0.04,"1 nonsynonymous","L183G",1
"lib2","SARS-CoV-2","ATTCCTGTCGTTTCAA",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36W T85M Y119G P161N G174V R179Q",6
"lib2","SARS-CoV-2","ATTCCTGTTTCGAGCA",11,6.92,NA,NA,NA,NA,NA,NA,"stop","Y35S S43N G196*",3
"lib2","SARS-CoV-2","ATTCCTTAAATCATCT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","A14S T63S D112G L122* F167V T201N",6
"lib2","SARS-CoV-2","ATTCCTTAAGAGTACT",8,24.85,6.1,-4.73,0.99,1.5,1.12,0.04,">1 nonsynonymous","F70N I104H N120W",3
"lib2","SARS-CoV-2","ATTCCTTAAGTAGACA",4,104.16,10.2,-0.63,0.03,2.82,1.05,0,">1 nonsynonymous","T15G N151D E154S",3
"lib2","SARS-CoV-2","ATTCCTTAGTGTTCAA",1,25.26,7.73,-3.1,0.41,1.5,1.12,0.04,">1 nonsynonymous","K114V Y121D",2
"lib2","SARS-CoV-2","ATTCCTTCAAGACAAA",2,23.74,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13I V37Y G117Q Y159I R179N",5
"lib2","SARS-CoV-2","ATTCCTTCTATAAACC",1,64.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65M D112I Y175S",3
"lib2","SARS-CoV-2","ATTCCTTGCACAAAAA",3,18.88,10.13,-0.7,0.17,1.92,1.2,0.01,">1 nonsynonymous","D34Y P96D L122K",3
"lib2","SARS-CoV-2","ATTCCTTGCTAAACTT",1,11.59,8.62,-2.21,0.26,1.5,1.14,0.03,">1 nonsynonymous","F8R N120S",2
"lib2","SARS-CoV-2","ATTCCTTGGGCGATAT",4,130.83,7.91,-2.92,0.14,2.2,1.09,0.01,">1 nonsynonymous","P149S Y175E",2
"lib2","SARS-CoV-2","ATTCCTTTAACAACGA",1,7.23,6.59,-4.24,0.9,3,1.06,0.02,">1 nonsynonymous","C61K R124C P197S",3
"lib2","SARS-CoV-2","ATTCCTTTTACGACCC",1,11.26,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","F12Y S45T D98L L125T",4
"lib2","SARS-CoV-2","ATTCGAAAGCCAGTAT",6,167.94,6.29,-4.55,0.33,1.5,1.12,0.01,">1 nonsynonymous","R27T C158L",2
"lib2","SARS-CoV-2","ATTCGAAAGTAGAGAC",14,387.15,10.39,-0.44,0.03,2.89,1.06,0,">1 nonsynonymous","S19A K56H",2
"lib2","SARS-CoV-2","ATTCGAAATCCGCGAT",7,41.54,9.69,-1.15,0.05,1.9,1.02,0,">1 nonsynonymous","V52I S69K",2
"lib2","SARS-CoV-2","ATTCGAACATACCCCT",1,8.26,7.19,-3.64,0.06,1.6,1,0,">1 nonsynonymous","T15S V20P K56T A81R G117D G152N",6
"lib2","SARS-CoV-2","ATTCGAAGAGAAACCA",4,11.75,6,-4.84,2,1.5,1.11,0.03,"1 nonsynonymous","R124M",1
"lib2","SARS-CoV-2","ATTCGAATACTGCGAA",2,6.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S R136P L162N",3
"lib2","SARS-CoV-2","ATTCGAATTAATTACT",3,18.37,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T55G L60Y K87V N120C C158G",5
"lib2","SARS-CoV-2","ATTCGAATTTTGAGGA",2,33.1,7.18,-3.66,0.41,1.5,1.09,0.05,">1 nonsynonymous","D68E Y91M L122W",3
"lib2","SARS-CoV-2","ATTCGACCAGGAGGTT",1,48.78,10.51,-0.33,0.06,3,1.02,0,"1 nonsynonymous","T85P",1
"lib2","SARS-CoV-2","ATTCGACCATGGGCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","S45T S69*",2
"lib2","SARS-CoV-2","ATTCGACCTTGCACCG",9,158.78,10.82,-0.02,0.04,2.92,1.09,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","ATTCGACGAAAAGTGT",6,1.14,NA,NA,NA,NA,NA,NA,"stop","C49* P82G Y178F",3
"lib2","SARS-CoV-2","ATTCGACTAATAAAAG",2,53.74,10.74,-0.09,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCGACTAGTCAAGC",4,45.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19V Y143L",2
"lib2","SARS-CoV-2","ATTCGAGAAAATTATG",2,10.03,8.44,-2.39,0.62,1.5,1.04,0.04,">1 nonsynonymous","W23V F47Y F62L",3
"lib2","SARS-CoV-2","ATTCGAGAATCAAGTG",1,59.69,10.76,-0.08,0.04,2.95,1.07,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","ATTCGAGACCACTTAA",2,40.45,10.09,-0.75,0.08,2.72,1.03,0,">1 nonsynonymous","A14V T148I L187H",3
"lib2","SARS-CoV-2","ATTCGAGAGAGTTTAT",3,34.96,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D90R D98S F160Y G172R",4
"lib2","SARS-CoV-2","ATTCGAGCTAAAAAAT",6,1.1,NA,NA,NA,NA,NA,NA,"stop","A14* Q84* Y119L A145K",4
"lib2","SARS-CoV-2","ATTCGAGTCCTAAGTA",1,1.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","ATTCGATAAAATGGAG",1,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L F17G S41L",3
"lib2","SARS-CoV-2","ATTCGATAGCAAATGC",8,76.78,9,-1.84,0.15,1.56,1.12,0.01,">1 nonsynonymous","A81L S184L",2
"lib2","SARS-CoV-2","ATTCGATATCCGGATA",1,10.96,6.89,-3.95,0.19,1.68,1.02,0.01,">1 nonsynonymous","A18H T55Y N64D V71L Q84R N120L S139N",7
"lib2","SARS-CoV-2","ATTCGATCATACTAAA",4,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91G S113R",2
"lib2","SARS-CoV-2","ATTCGCAAATAACCCC",7,158.26,6.71,-4.13,0.3,1.5,1.16,0.01,">1 nonsynonymous","Y35M R73K Y159R",3
"lib2","SARS-CoV-2","ATTCGCACACTTAGTG",12,140.16,10.64,-0.2,0.05,2.89,1.05,0,">1 nonsynonymous","N64S D97V F134H",3
"lib2","SARS-CoV-2","ATTCGCAGGATCCTCG",7,0.2,NA,NA,NA,NA,NA,NA,"stop","F8T K56S D90G D98* I104V A190H",6
"lib2","SARS-CoV-2","ATTCGCATACACTGTA",6,19.75,6,-4.84,1.6,1.5,1.09,0.04,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","ATTCGCATATGCCAAA",2,8.65,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5I K48N C150S G174M",4
"lib2","SARS-CoV-2","ATTCGCATTAACTAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55A G74A N130D G146T",4
"lib2","SARS-CoV-2","ATTCGCATTGATGACT",2,80.21,10.77,-0.07,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCGCCGCAACGACA",15,145.4,10.68,-0.16,0.03,2.93,1.04,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","ATTCGCCTGCGACCAT",1,2.43,NA,NA,NA,NA,NA,NA,"stop","L5* T55Q P191Q",3
"lib2","SARS-CoV-2","ATTCGCGGGACATAAT",16,309.26,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F62V N107K P133E Y143P",4
"lib2","SARS-CoV-2","ATTCGCGGGCTTGTGT",3,54.17,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L38H Q84K N92H K198V",4
"lib2","SARS-CoV-2","ATTCGCGTACTTGCCT",2,5.34,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14K C61V D112A L131G",4
"lib2","SARS-CoV-2","ATTCGCGTCTTTCATT",2,10.56,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R73T A81V P133T F160H",4
"lib2","SARS-CoV-2","ATTCGCTAAACCGCCT",2,9.55,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R16D G51T D59A D112C D137T G174R",6
"lib2","SARS-CoV-2","ATTCGCTCTTTTCGCT",2,20.26,9.18,-1.66,0.16,1.71,1.07,0.01,">1 nonsynonymous","L38N H189Y S200T",3
"lib2","SARS-CoV-2","ATTCGCTGCATAGACA",7,97.12,8.5,-2.34,0.14,1.5,1.06,0.01,">1 nonsynonymous","Y91S P96S S129V",3
"lib2","SARS-CoV-2","ATTCGCTGTAACAACG",9,22.82,6,-4.84,2,3,1.35,0.02,">1 nonsynonymous","A42F P96M A105N",3
"lib2","SARS-CoV-2","ATTCGGAAAAATTCGT",1,0.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","ATTCGGAACCTCACTC",12,190.72,10.73,-0.1,0.03,2.97,1.02,0,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","ATTCGGAACTACGACA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","D59G D97R V103G D112*",4
"lib2","SARS-CoV-2","ATTCGGAATACATAGA",3,74.65,7.61,-3.22,0.37,1.5,1.04,0.05,">1 nonsynonymous","A22C A33S Y39H N118D K128L",5
"lib2","SARS-CoV-2","ATTCGGACGGGTCTTC",1,14.15,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T63K R78P P96L Q168L",4
"lib2","SARS-CoV-2","ATTCGGCAACAATTAG",7,7.11,NA,NA,NA,NA,NA,NA,"stop","K87* P149L",2
"lib2","SARS-CoV-2","ATTCGGCTGTGGGGCA",5,35.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32R D68G I104S",3
"lib2","SARS-CoV-2","ATTCGGGAGGCCCTGT",17,200.85,9.85,-0.99,0.05,2.2,1.06,0,">1 nonsynonymous","K128I R136I",2
"lib2","SARS-CoV-2","ATTCGGTAAAACAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4F I28S F62* G83D G101* F156V",6
"lib2","SARS-CoV-2","ATTCGGTACCCAAAGG",3,27.26,10.81,-0.03,0.05,2.92,1.1,0,">1 nonsynonymous","P7A T55L",2
"lib2","SARS-CoV-2","ATTCGTAAAAAGTCTT",2,53.53,10.34,-0.5,0.03,2.95,1.05,0,">1 nonsynonymous","K114N K128R G152S K199Y",4
"lib2","SARS-CoV-2","ATTCGTAACCCTCTAT",6,28.36,6,-4.84,2,1.5,1.33,0.03,"1 nonsynonymous","I80S",1
"lib2","SARS-CoV-2","ATTCGTAACGCAGGAA",8,20.88,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","V71G W106Y",2
"lib2","SARS-CoV-2","ATTCGTATAAATACCA",9,91.79,10.78,-0.05,0.03,2.94,1.08,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","ATTCGTATATAAGGTG",5,1.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","ATTCGTATTGCGACCA",10,208.31,10.78,-0.06,0.03,2.93,1.06,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","ATTCGTCAGCCAGCAG",2,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L C61S F99H G116E",4
"lib2","SARS-CoV-2","ATTCGTCTCCTAAAAA",7,51.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y66R G86R E141R",3
"lib2","SARS-CoV-2","ATTCGTCTGTATAAAC",3,59.76,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","E10I F44S I72M L95D E141A",5
"lib2","SARS-CoV-2","ATTCGTGACAACACAC",6,159.25,10.52,-0.31,0.05,2.86,1.1,0,">1 nonsynonymous","N4R R27W Y39V S45N L122R L188I",6
"lib2","SARS-CoV-2","ATTCGTTCAAGTTAGT",3,19.66,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V37M T63S P82T L122I P149I",5
"lib2","SARS-CoV-2","ATTCTAAAAGATGTGA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","S19* D90Q Y119L G146D",4
"lib2","SARS-CoV-2","ATTCTAAAATGCACGC",4,29.41,6.27,-4.57,0.63,1.5,1.12,0.02,">1 nonsynonymous","D112G S184M",2
"lib2","SARS-CoV-2","ATTCTAAATGCATACC",7,114.2,10.81,-0.03,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTAACAATACAAA",11,70.69,8.19,-2.64,0.07,1.74,1.08,0,">1 nonsynonymous","S41T T63V Y121A S139N",4
"lib2","SARS-CoV-2","ATTCTAACCACAACTT",5,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S R25G C61D",3
"lib2","SARS-CoV-2","ATTCTAAGAACTATCA",3,48.13,10.81,-0.02,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTAAGACTCTGAT",10,206.18,10.02,-0.81,0.05,2.9,1.09,0,">1 nonsynonymous","T63R F156S",2
"lib2","SARS-CoV-2","ATTCTAAGCATATTGC",2,17.19,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y121S F134V C158I",3
"lib2","SARS-CoV-2","ATTCTAAGTAAAAACT",2,21.19,10.65,-0.18,0.09,3,1.03,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","ATTCTAATACATCAGC",5,72.22,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V103I L131P E141V S147Y",4
"lib2","SARS-CoV-2","ATTCTAATACTATGGT",12,82.77,9.34,-1.49,0.04,2.9,1.09,0,"1 nonsynonymous","G117N",1
"lib2","SARS-CoV-2","ATTCTAATAGTCCTCC",4,61.07,10.88,0.04,0.05,2.97,1.01,0,"1 nonsynonymous","R16E",1
"lib2","SARS-CoV-2","ATTCTAATCCTATCTC",6,17.69,8.55,-2.28,0.18,1.88,1.1,0.01,">1 nonsynonymous","C6K T15Y T46L D97E V115S",5
"lib2","SARS-CoV-2","ATTCTAATCGCTTAAT",3,24.54,10.43,-0.4,0.2,2.56,1.04,0.01,">1 nonsynonymous","S41D I104T",2
"lib2","SARS-CoV-2","ATTCTAATTAAGGTAC",1,23,8.4,-2.44,0.4,1.5,1.06,0.07,">1 nonsynonymous","R73N P133K",2
"lib2","SARS-CoV-2","ATTCTAATTTGGTCAG",3,5.24,6.37,-4.46,1.99,3,1,0,">1 nonsynonymous","F17R K48M P133M",3
"lib2","SARS-CoV-2","ATTCTACAATGTTGCG",3,27.52,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N64S P96R R127S Y165V",4
"lib2","SARS-CoV-2","ATTCTACAATTAACCA",9,1.62,NA,NA,NA,NA,NA,NA,"stop","V11L C49* K94H C102K G152I",5
"lib2","SARS-CoV-2","ATTCTACACAAACAAA",13,7.17,NA,NA,NA,NA,NA,NA,"stop","N64K V71Q Y143*",3
"lib2","SARS-CoV-2","ATTCTACATGTGTATC",4,36.01,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y35K C102R",2
"lib2","SARS-CoV-2","ATTCTACCAGTATTAA",5,160.7,9.69,-1.15,0.06,2.78,1.06,0,">1 nonsynonymous","D90Y F156L",2
"lib2","SARS-CoV-2","ATTCTACCATAAACCA",7,182.01,10.5,-0.33,0.04,2.89,1.11,0,">1 nonsynonymous","I138L A145S P149L",3
"lib2","SARS-CoV-2","ATTCTACCCGAATACT",8,152.13,9.4,-1.44,0.04,2.96,1.06,0,">1 nonsynonymous","K87S L125G",2
"lib2","SARS-CoV-2","ATTCTACCGAAGTTTC",5,91.25,9.64,-1.2,0.04,2.03,1.03,0,">1 nonsynonymous","L60P D90Y S200A",3
"lib2","SARS-CoV-2","ATTCTACCTTGTAAAC",7,38.61,9.82,-1.01,0.1,2.23,1.08,0,">1 nonsynonymous","P54N F167Y",2
"lib2","SARS-CoV-2","ATTCTACCTTTACGCA",12,59.54,9.84,-0.99,0.07,2.03,1.07,0,">1 nonsynonymous","Y35D T55S L131M",3
"lib2","SARS-CoV-2","ATTCTACGGTAACTAA",4,58.81,8.75,-2.09,0.18,1.5,1.09,0.02,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","ATTCTACTGAAAGAAA",2,18.95,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T15H Y50V T55R Q163I",4
"lib2","SARS-CoV-2","ATTCTACTGAATTTGC",2,0,NA,NA,NA,NA,NA,NA,"stop","R25* A33R D90* Y119S R136P",5
"lib2","SARS-CoV-2","ATTCTAGAAATGTTAT",3,161.43,10.16,-0.68,0.04,2.91,1.05,0,">1 nonsynonymous","S129P G155R H189N",3
"lib2","SARS-CoV-2","ATTCTAGAACAATGAA",6,57.38,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44L R136N V173S",3
"lib2","SARS-CoV-2","ATTCTAGAAGTAGAAA",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56A R127L",2
"lib2","SARS-CoV-2","ATTCTAGAGTTCTAAT",17,108.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4H C61L V71W I138Q",4
"lib2","SARS-CoV-2","ATTCTAGCAAGACGTA",3,0.49,NA,NA,NA,NA,NA,NA,"stop","K56L G83A I104* P149L Y175M",5
"lib2","SARS-CoV-2","ATTCTAGCACTATTCC",12,123.37,9.55,-1.29,0.1,2.03,1.1,0.01,">1 nonsynonymous","K94H R136A",2
"lib2","SARS-CoV-2","ATTCTAGCAGAAGATG",16,429.01,10.84,0,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTCTAGCGCATGTCC",9,325.35,10.13,-0.71,0.06,2.6,1.02,0,">1 nonsynonymous","I2A F47H",2
"lib2","SARS-CoV-2","ATTCTAGGACGTGTTA",6,3.25,NA,NA,NA,NA,NA,NA,"stop","K26L Q144M P149N Q176*",4
"lib2","SARS-CoV-2","ATTCTAGGTATAGGGG",4,6.22,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A42L G51S L60Q C102P",4
"lib2","SARS-CoV-2","ATTCTATCAGAGCTTA",7,184.31,10.74,-0.1,0.03,2.93,1.08,0,">1 nonsynonymous","V173F A190V",2
"lib2","SARS-CoV-2","ATTCTATCAGTGATAT",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y I104S",2
"lib2","SARS-CoV-2","ATTCTATCCCAAACAA",7,0.12,NA,NA,NA,NA,NA,NA,"stop","P96I C102* N110R",3
"lib2","SARS-CoV-2","ATTCTATCCCTTAGAT",1,82.51,9.62,-1.22,0.04,2.93,1.04,0,">1 nonsynonymous","I2D C61N D90C F156L",4
"lib2","SARS-CoV-2","ATTCTATTAAAATTGA",7,0.22,NA,NA,NA,NA,NA,NA,"stop","S36D N92*",2
"lib2","SARS-CoV-2","ATTCTATTCATACAAA",1,17.96,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","V103H E154S",2
"lib2","SARS-CoV-2","ATTCTATTCCCTCGAA",11,78.75,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L95S Y119K V173A",3
"lib2","SARS-CoV-2","ATTCTATTCGTCTTTT",13,194.41,9.9,-0.94,0.04,2.09,1.06,0,"1 nonsynonymous","V180A",1
"lib2","SARS-CoV-2","ATTCTATTGTATTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D112Q V182*",2
"lib2","SARS-CoV-2","ATTCTATTTAAACGCT",1,6.54,10.55,-0.29,0.13,2.91,1.07,0.01,">1 nonsynonymous","A18T N24V",2
"lib2","SARS-CoV-2","ATTCTATTTAATCTAC",3,48.25,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","L57Q F167S",2
"lib2","SARS-CoV-2","ATTCTCAAAACGTTTT",6,4.81,NA,NA,NA,NA,NA,NA,"stop","S113C N120* G155Y",3
"lib2","SARS-CoV-2","ATTCTCAACACTTTAG",3,21.95,9.97,-0.86,0.12,2.38,1.05,0.01,">1 nonsynonymous","V37S A67L P133M",3
"lib2","SARS-CoV-2","ATTCTCAAGTGACGAC",20,102.11,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1D Y91V F99A S184L",4
"lib2","SARS-CoV-2","ATTCTCAATACAATTC",4,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86H N109D I142T",3
"lib2","SARS-CoV-2","ATTCTCACAAAATTCG",1,3.49,NA,NA,NA,NA,NA,NA,"stop","A14* D98V A145F F160S Q176A",5
"lib2","SARS-CoV-2","ATTCTCCATAAAAAAC",3,23.42,7.47,-3.37,0.47,1.5,1.12,0.06,">1 nonsynonymous","F47I L60I V103N G116P R136F Q176A",6
"lib2","SARS-CoV-2","ATTCTCCCGATCAAAA",9,176.57,10.3,-0.53,0.03,2.85,1.05,0,">1 nonsynonymous","A42S K94A",2
"lib2","SARS-CoV-2","ATTCTCCTGCTAGATA",5,95.57,10.77,-0.07,0.05,2.95,1.05,0,">1 nonsynonymous","I2A K87F",2
"lib2","SARS-CoV-2","ATTCTCGAACCATAGT",7,22.29,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N1M F12Y A42K Y91L Y123S G146M",6
"lib2","SARS-CoV-2","ATTCTCGACTCGATAA",4,54.64,10.78,-0.06,0.04,2.94,1.08,0,"1 nonsynonymous","P54V",1
"lib2","SARS-CoV-2","ATTCTCGCACGAAGCA",14,278.1,10.84,0,0.05,2.92,1.09,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","ATTCTCGCCATAAACC",6,81.82,10.86,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTCTACTGGCCTT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Q G101P",2
"lib2","SARS-CoV-2","ATTCTCTCGCTTTTAC",1,2.39,NA,NA,NA,NA,NA,NA,"stop","D68* P149F K198Q",3
"lib2","SARS-CoV-2","ATTCTCTCGTAACTAT",7,91.33,6,-4.84,2,3,1.12,0,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","ATTCTCTCGTACACAA",3,3.86,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTCTGCGCCAGGA",3,24.09,6,-4.84,1.37,1.5,1.17,0.02,">1 nonsynonymous","N4T F44H K56Q K87G N110F R127A F160S",7
"lib2","SARS-CoV-2","ATTCTCTTAAGATGAA",1,26.65,10.78,-0.06,0.06,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTCTTGCACCAAT",5,34.5,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14F N107D Q144K",3
"lib2","SARS-CoV-2","ATTCTGAACAACCACC",4,28.42,10.65,-0.19,0.07,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTGAACTATTCTT",2,13.75,6,-4.84,1.7,3,1.09,0,">1 nonsynonymous","V11P S53M G74D C102S Y119S F156Y",6
"lib2","SARS-CoV-2","ATTCTGAAGCTTGTCA",5,18.43,10.84,0,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTCTGAAGGGGGAAT",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16F P133N F167L V181T",4
"lib2","SARS-CoV-2","ATTCTGAATAAATCCC",5,224.08,10.22,-0.62,0.04,2.85,1.02,0,"1 nonsynonymous","D34A",1
"lib2","SARS-CoV-2","ATTCTGAATCTTACAA",14,118.06,7.93,-2.9,0.19,1.5,1.07,0.01,">1 nonsynonymous","F12C N40E D97W",3
"lib2","SARS-CoV-2","ATTCTGACCTAGGCAT",2,108.65,6,-4.84,2,3,1.11,0,">1 nonsynonymous","W23L V37S C61L G86K T170L",5
"lib2","SARS-CoV-2","ATTCTGAGGAAAACCC",7,166.49,9.18,-1.66,0.04,2.92,1.07,0,"1 nonsynonymous","F156D",1
"lib2","SARS-CoV-2","ATTCTGCACATTAATA",5,40.61,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44T K94L K114S P133H",4
"lib2","SARS-CoV-2","ATTCTGCCCAACACCG",18,130.08,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I2G S45F W106Y Y165K",4
"lib2","SARS-CoV-2","ATTCTGCTCGAACGCT",4,90.24,10.47,-0.37,0.06,2.84,1.1,0,">1 nonsynonymous","V11I I138R N171I",3
"lib2","SARS-CoV-2","ATTCTGGAAGTTTAAA",4,78.93,8.16,-2.67,0.16,1.61,1.07,0.01,"1 nonsynonymous","C150A",1
"lib2","SARS-CoV-2","ATTCTGGCTTATCATT",4,28.74,6.55,-4.29,0.43,1.5,1.06,0.02,">1 nonsynonymous","Y91T Y121L E154L",3
"lib2","SARS-CoV-2","ATTCTGTCAAGGATTC",2,95.44,10.12,-0.72,0.03,2.87,1.09,0,"1 nonsynonymous","C6A",1
"lib2","SARS-CoV-2","ATTCTGTCCATCAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","K87* R136Q Y143R N151H T201M",5
"lib2","SARS-CoV-2","ATTCTTAAATAAGGCA",10,2.03,NA,NA,NA,NA,NA,NA,"stop","A33R K48L K87* T201V",4
"lib2","SARS-CoV-2","ATTCTTAACAGCAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* Y35V A42W T140D F160R",5
"lib2","SARS-CoV-2","ATTCTTAAGATATAAT",7,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S T85A G101S G155L F185N",5
"lib2","SARS-CoV-2","ATTCTTACCAGCAGGT",5,96.89,10.8,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","ATTCTTACGATAATTT",7,76.47,10.24,-0.6,0.03,2.92,1.07,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","ATTCTTACTTAAACCG",4,1.21,NA,NA,NA,NA,NA,NA,"stop","N24* S41L R136H T170L",4
"lib2","SARS-CoV-2","ATTCTTATAAACACAA",15,348.49,8.95,-1.89,0.05,2.89,1.08,0,">1 nonsynonymous","Y35P Y119F",2
"lib2","SARS-CoV-2","ATTCTTATATCCATTC",1,12.49,9.92,-0.92,0.11,2.78,1.12,0.01,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","ATTCTTATTAAATACT",4,83.3,10.12,-0.72,0.05,2.94,1.01,0,">1 nonsynonymous","Y121V S184T",2
"lib2","SARS-CoV-2","ATTCTTATTAGTCAAT",1,6.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13P G86H F126C P149W P191G",5
"lib2","SARS-CoV-2","ATTCTTATTGGTTTGA",1,6.43,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","G101S Y121I K198Q",3
"lib2","SARS-CoV-2","ATTCTTCACCACGTAC",4,51.08,6.74,-4.09,0.41,1.5,1.2,0.03,">1 nonsynonymous","L5A W23P N40I I104Y",4
"lib2","SARS-CoV-2","ATTCTTCAGTCCTGAA",5,119.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12A V37I Y119L S129A C158L",5
"lib2","SARS-CoV-2","ATTCTTCCCGTGCTAC",3,20.06,9.73,-1.11,0.13,2.01,1.07,0.01,">1 nonsynonymous","V11L D90I",2
"lib2","SARS-CoV-2","ATTCTTCCGATGATTC",1,40.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10N A33S G86H P169S",4
"lib2","SARS-CoV-2","ATTCTTCTAAATTGGT",4,16.54,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","F12Y S36P T100A Y121T",4
"lib2","SARS-CoV-2","ATTCTTGAAAAATGAA",7,86.44,10.43,-0.4,0.03,2.98,1.02,0,">1 nonsynonymous","T3S L60T K87R",3
"lib2","SARS-CoV-2","ATTCTTGCACATGCCT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","F17E D90H G172*",3
"lib2","SARS-CoV-2","ATTCTTGCATAAACAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M A33M F47L P54N I88N N107K G152M",7
"lib2","SARS-CoV-2","ATTCTTGCATTAATGC",2,12.88,8.23,-2.61,0.26,1.51,1.02,0.02,">1 nonsynonymous","W23G L60N",2
"lib2","SARS-CoV-2","ATTCTTGCGATTACGT",1,14.58,10.26,-0.58,0.08,2.86,1.03,0,">1 nonsynonymous","A33R K114R P197G",3
"lib2","SARS-CoV-2","ATTCTTGGGCCACAAC",9,3.07,NA,NA,NA,NA,NA,NA,"stop","W23P K87* K94* T100R",4
"lib2","SARS-CoV-2","ATTCTTGGTTCAAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14T N30S Y50* F156G P161V",5
"lib2","SARS-CoV-2","ATTCTTTAATCACAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90G L125A E135L",3
"lib2","SARS-CoV-2","ATTCTTTCGTAAACAA",4,0,NA,NA,NA,NA,NA,NA,"stop","A22* L187P",2
"lib2","SARS-CoV-2","ATTCTTTGCACGCGGC",7,189.76,10.86,0.02,0.05,2.88,1.13,0,"1 nonsynonymous","S36E",1
"lib2","SARS-CoV-2","ATTCTTTGCAGTGCTA",6,29.19,6,-4.84,1.45,1.5,1.19,0.01,">1 nonsynonymous","L57Y N92F",2
"lib2","SARS-CoV-2","ATTCTTTTTAGAAATT",6,29.57,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40R N92L S129D",3
"lib2","SARS-CoV-2","ATTCTTTTTTGACTCG",3,30.56,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","I72N K87M D97S Y123F K132C",5
"lib2","SARS-CoV-2","ATTGAAAAAAAGAAAA",2,67.1,9.97,-0.86,0.09,2.59,1.04,0,">1 nonsynonymous","S43T R136F K198T",3
"lib2","SARS-CoV-2","ATTGAAAAAATAGATA",9,8.12,6.16,-4.67,0.96,1.5,1.08,0.01,">1 nonsynonymous","Y50M C61M T85Y",3
"lib2","SARS-CoV-2","ATTGAAAAACCACATT",6,70.73,10.81,-0.02,0.06,2.86,1.09,0,"1 nonsynonymous","Y66T",1
"lib2","SARS-CoV-2","ATTGAAAAAGATCTTA",1,17.03,9.18,-1.65,0.1,2.86,1.02,0,">1 nonsynonymous","I28F G166L",2
"lib2","SARS-CoV-2","ATTGAAAAATAATAGG",4,43.47,10.71,-0.12,0.04,2.97,1.06,0,">1 nonsynonymous","Y39V K128M T201C",3
"lib2","SARS-CoV-2","ATTGAAAAGCTTATAC",6,1.01,NA,NA,NA,NA,NA,NA,"stop","E10V A81L N107*",3
"lib2","SARS-CoV-2","ATTGAAAAGGGAATAA",7,50.77,6.04,-4.8,1.09,1.5,1.21,0.02,">1 nonsynonymous","S69V G117S",2
"lib2","SARS-CoV-2","ATTGAAAATTTCGCGG",2,11.17,6,-4.83,0.5,3,1.04,0,">1 nonsynonymous","R16M F99V S113R S184I",4
"lib2","SARS-CoV-2","ATTGAAACAAAAACGA",1,8.72,10.31,-0.53,0.06,2.99,1.06,0,">1 nonsynonymous","P54S L60V V153Y",3
"lib2","SARS-CoV-2","ATTGAAACAAATAAGG",2,27.87,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G86M D90P L95K I104C",4
"lib2","SARS-CoV-2","ATTGAAACCACCTAGC",1,36.67,9.97,-0.86,0.12,2.63,1.08,0.01,">1 nonsynonymous","N120L I138Y",2
"lib2","SARS-CoV-2","ATTGAAACCCAAGGCT",13,4.17,NA,NA,NA,NA,NA,NA,"stop","N13T S69E K87Q G146A A190C T201*",6
"lib2","SARS-CoV-2","ATTGAAACCTTCCGTA",9,15.24,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","G51T A105T Y165R V182P",4
"lib2","SARS-CoV-2","ATTGAAACGGGCCACG",1,31.35,10.42,-0.41,0.11,2.8,1.16,0.01,">1 nonsynonymous","A33V V182I",2
"lib2","SARS-CoV-2","ATTGAAACTATTGATT",3,6.05,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","C49R K87A C102S",3
"lib2","SARS-CoV-2","ATTGAAAGGAATCCGA",2,47.88,10.16,-0.68,0.06,2.86,1.06,0,">1 nonsynonymous","T3L T46W Y121F",3
"lib2","SARS-CoV-2","ATTGAAAGTACAGTCA",12,270.29,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y35R Y159T",2
"lib2","SARS-CoV-2","ATTGAAATGAAAACCA",11,191.05,10.08,-0.76,0.06,2.55,1.02,0,">1 nonsynonymous","Y66S G83S",2
"lib2","SARS-CoV-2","ATTGAAATGCAAAAAG",1,29.08,10.22,-0.62,0.27,2.13,1.03,0.05,">1 nonsynonymous","I2D D34S K87P",3
"lib2","SARS-CoV-2","ATTGAACACACTCTTT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R N130D",2
"lib2","SARS-CoV-2","ATTGAACATAAAAAGG",15,99.4,7.4,-3.44,0.22,1.5,1.14,0.01,"1 nonsynonymous","R25F",1
"lib2","SARS-CoV-2","ATTGAACATAGACACA",10,101,9.01,-1.83,0.11,1.6,1.1,0.01,">1 nonsynonymous","C49V T55W P149M",3
"lib2","SARS-CoV-2","ATTGAACCCAACCGAA",11,9.25,NA,NA,NA,NA,NA,NA,"stop","S19A V77M D98* A145L",4
"lib2","SARS-CoV-2","ATTGAACCGTTTCATA",5,64.98,10.77,-0.06,0.05,2.97,1.06,0,"1 nonsynonymous","Q84G",1
"lib2","SARS-CoV-2","ATTGAACGCCAACAAA",2,4.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","ATTGAACTAAGAAGGA",2,47.96,10.15,-0.68,0.07,2.81,1.05,0,">1 nonsynonymous","T3K L5Y T85D N110M",4
"lib2","SARS-CoV-2","ATTGAACTACTCGTCC",2,26.84,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","N40V K56H K94F W106S V173W",5
"lib2","SARS-CoV-2","ATTGAACTACTTCCAG",17,263.94,10.2,-0.63,0.04,2.98,1.02,0,">1 nonsynonymous","S43W T55E G174W",3
"lib2","SARS-CoV-2","ATTGAACTGTTCTTTC",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L D90Q E135P",3
"lib2","SARS-CoV-2","ATTGAAGAAACAGATG",2,1.48,NA,NA,NA,NA,NA,NA,"stop","G9* G86I A105R G174N",4
"lib2","SARS-CoV-2","ATTGAAGAAGAGATGA",1,55.59,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","W23D A42M P82K W106F G146M",5
"lib2","SARS-CoV-2","ATTGAAGATAGCCCTC",4,0.09,NA,NA,NA,NA,NA,NA,"stop","D68* P96L S113*",3
"lib2","SARS-CoV-2","ATTGAAGATTTAAAAG",7,61.65,10.44,-0.39,0.05,2.94,1.05,0,">1 nonsynonymous","A33N S164K",2
"lib2","SARS-CoV-2","ATTGAAGCAATTAAGT",6,95.05,8.36,-2.48,0.15,2.83,1.07,0.01,">1 nonsynonymous","Y35I N64T S113L S164A",4
"lib2","SARS-CoV-2","ATTGAAGCCTACACAT",13,112.17,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C49V K87T Y91K A105L",4
"lib2","SARS-CoV-2","ATTGAAGGCATGAAGA",2,121.58,9.97,-0.86,0.04,2.95,1.04,0,">1 nonsynonymous","P7A F156S",2
"lib2","SARS-CoV-2","ATTGAAGGTGAATACG",1,0.73,NA,NA,NA,NA,NA,NA,"stop","T63L E141*",2
"lib2","SARS-CoV-2","ATTGAAGTAGGCACCT",4,28.2,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V37K F62Q N109K Y123L T140S P169C",6
"lib2","SARS-CoV-2","ATTGAAGTAGTGCGTG",7,2.67,NA,NA,NA,NA,NA,NA,"stop","R124*",1
"lib2","SARS-CoV-2","ATTGAAGTTAACTTTT",8,147.07,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N40P A105E G166C Q176S",4
"lib2","SARS-CoV-2","ATTGAAGTTATACTAG",1,2.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","ATTGAATAGCACTAAT",3,28.96,9.52,-1.31,0.13,2,1.1,0.01,">1 nonsynonymous","C6S S45Y I104M T201G",4
"lib2","SARS-CoV-2","ATTGAATAGCACTGTG",7,101.9,10.66,-0.18,0.04,2.86,1.07,0,">1 nonsynonymous","G9W E141A",2
"lib2","SARS-CoV-2","ATTGAATAGGTAACAT",1,17.64,6,-4.84,2,3,1.09,0,">1 nonsynonymous","I2C V37I Y50T I88L N130V",5
"lib2","SARS-CoV-2","ATTGAATAGTGAAATA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","S29E D68L S147* C150F G155S F167E",6
"lib2","SARS-CoV-2","ATTGAATATAGACAAG",10,64.29,6.33,-4.5,0.37,1.5,1.15,0.01,">1 nonsynonymous","A89L N157S",2
"lib2","SARS-CoV-2","ATTGAATCCGCACGTA",3,38.89,8.67,-2.16,0.15,1.91,1.03,0.01,">1 nonsynonymous","C6G G83A Y123V K199Q",4
"lib2","SARS-CoV-2","ATTGAATCGCGGGAAA",1,11.26,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10W S29Q S108R G116M K128F",5
"lib2","SARS-CoV-2","ATTGAATCGTACTTTT",5,29.38,9.34,-1.5,0.16,1.84,1.16,0.01,">1 nonsynonymous","A42Y A81F E141K",3
"lib2","SARS-CoV-2","ATTGAATCTATGTGAC",7,136.87,8.94,-1.89,0.06,2.6,1.06,0,">1 nonsynonymous","E10K N109H K128S N151C",4
"lib2","SARS-CoV-2","ATTGAATGAATACGTG",4,77.91,10.55,-0.29,0.03,2.93,1.04,0,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","ATTGAATGGCAAGAAT",3,3.02,NA,NA,NA,NA,NA,NA,"stop","C31R L95* N107L G155R K198H",5
"lib2","SARS-CoV-2","ATTGAATGTAACTGCC",4,101.74,10.44,-0.39,0.04,2.92,1.06,0,">1 nonsynonymous","P54I F156R K198L",3
"lib2","SARS-CoV-2","ATTGAATTAAGCAGAT",1,11.78,8.8,-2.04,0.29,1.86,1.1,0.03,">1 nonsynonymous","K94A Y119T E154Y T201W",4
"lib2","SARS-CoV-2","ATTGACAAATCTAAAT",10,5.88,NA,NA,NA,NA,NA,NA,"stop","N13W S45* C61T S147Y G152H",5
"lib2","SARS-CoV-2","ATTGACAACAACTAGG",14,192.74,9.65,-1.19,0.03,2.9,1.07,0,"1 nonsynonymous","K114P",1
"lib2","SARS-CoV-2","ATTGACAACGAAATAT",1,19.18,9.72,-1.12,0.13,1.92,1.11,0.01,">1 nonsynonymous","F47N D90N",2
"lib2","SARS-CoV-2","ATTGACAAGGAACGTA",7,110.16,10.25,-0.59,0.03,2.84,1.05,0,">1 nonsynonymous","L5T P161S S184T",3
"lib2","SARS-CoV-2","ATTGACAATCATGACA",18,2.86,NA,NA,NA,NA,NA,NA,"stop","F44R Y50R Y123* S129L L183C G196V",6
"lib2","SARS-CoV-2","ATTGACACATGCGGCA",7,80.32,9.18,-1.66,0.11,1.56,1.05,0.01,"1 nonsynonymous","L131H",1
"lib2","SARS-CoV-2","ATTGACACCCATCAAA",8,97.46,10.53,-0.3,0.06,2.94,1.04,0,">1 nonsynonymous","F8L L57F",2
"lib2","SARS-CoV-2","ATTGACAGACACATAT",6,0.05,NA,NA,NA,NA,NA,NA,"stop","L60F F99* G155Y A192W",4
"lib2","SARS-CoV-2","ATTGACAGGTTTTAAG",4,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L I80E T140S P169A G174M",5
"lib2","SARS-CoV-2","ATTGACATAGTAAAGG",8,0.55,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","ATTGACATTTGGCCCA",3,101.16,10.11,-0.72,0.07,2.41,1,0,">1 nonsynonymous","P96D S129I",2
"lib2","SARS-CoV-2","ATTGACCAAGTAACGC",2,20.57,6,-4.84,1.9,3,1.2,0.01,">1 nonsynonymous","I28T W106G I142L",3
"lib2","SARS-CoV-2","ATTGACCCAATTGCCC",1,8.75,10.75,-0.09,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGACCCCATGCGGT",1,59.25,9.37,-1.46,0.07,1.84,1.13,0,">1 nonsynonymous","Y35A S43W Y91N",3
"lib2","SARS-CoV-2","ATTGACCCGCATATAG",1,12.03,10.73,-0.11,0.06,2.89,1.1,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","ATTGACCTAAAAAAAA",2,7.03,6,-4.84,2,3,1.02,0,">1 nonsynonymous","N24S D68L D90F Y119S",4
"lib2","SARS-CoV-2","ATTGACCTAATTTAGC",4,17.99,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","S36Y G86Y P96L K114R N120L",5
"lib2","SARS-CoV-2","ATTGACCTATGGGAGG",7,50.89,9.62,-1.21,0.09,2.22,1.04,0,">1 nonsynonymous","S69G K87L",2
"lib2","SARS-CoV-2","ATTGACCTGAAATCAC",16,350.32,10.81,-0.03,0.03,2.95,1.04,0,"1 nonsynonymous","F62T",1
"lib2","SARS-CoV-2","ATTGACCTGTTAACCA",1,1.24,NA,NA,NA,NA,NA,NA,"stop","V71M G152* Y159S",3
"lib2","SARS-CoV-2","ATTGACCTGTTCGAAG",15,69.1,6,-4.84,1.3,3,1.17,0.01,">1 nonsynonymous","D34A A42V C49F D98E",4
"lib2","SARS-CoV-2","ATTGACGAAACGTAGA",2,114.95,8.43,-2.41,0.11,2.15,1.12,0.01,">1 nonsynonymous","I142L Q176R",2
"lib2","SARS-CoV-2","ATTGACGAATATTCTG",7,79.86,10.33,-0.51,0.04,2.87,1.03,0,"1 nonsynonymous","P7I",1
"lib2","SARS-CoV-2","ATTGACGACACTAATT",1,30.81,10.36,-0.48,0.07,2.86,1.05,0,">1 nonsynonymous","S29T L38F S41C",3
"lib2","SARS-CoV-2","ATTGACGGAAATGTGG",4,76.9,9.17,-1.67,0.12,1.79,1.09,0.01,">1 nonsynonymous","R16N F62D A105W S184H",4
"lib2","SARS-CoV-2","ATTGACGGTTAGATAT",2,12.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100H A105P",2
"lib2","SARS-CoV-2","ATTGACGTAACCTTTG",1,19.44,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9E S29W C61D D90M I104K",5
"lib2","SARS-CoV-2","ATTGACTAACCCGAAT",7,37.35,10.81,-0.03,0.07,2.92,1.11,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","ATTGACTAAGCAGTTC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","ATTGACTAAGTCTCGC",5,5.25,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A105E L183D",2
"lib2","SARS-CoV-2","ATTGACTAAGTGCTAA",5,146.14,10.52,-0.32,0.04,2.87,1.08,0,">1 nonsynonymous","P96A F134S",2
"lib2","SARS-CoV-2","ATTGACTATGATTCCT",11,186.61,10.34,-0.5,0.03,2.96,1.03,0,">1 nonsynonymous","L5G T100L P149T G155S",4
"lib2","SARS-CoV-2","ATTGACTCTGTACAAG",2,37.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19E Y39G Y91G",3
"lib2","SARS-CoV-2","ATTGAGAACATCACGT",7,17.53,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","S43F I88R",2
"lib2","SARS-CoV-2","ATTGAGAACCCTAATC",1,45.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40Y K56L N64D I104S L131K K199N",6
"lib2","SARS-CoV-2","ATTGAGAATAGACATT",5,61.17,8.49,-2.35,0.1,2.54,1.08,0,">1 nonsynonymous","P96Q F126Y",2
"lib2","SARS-CoV-2","ATTGAGAATAGGGGTT",2,49.95,10.63,-0.21,0.07,2.8,1.14,0,">1 nonsynonymous","N40H T55D S139R",3
"lib2","SARS-CoV-2","ATTGAGACAAAAGACT",21,221.9,10.12,-0.71,0.06,2.57,1.02,0,">1 nonsynonymous","T15M K56N D97I K114R",4
"lib2","SARS-CoV-2","ATTGAGACCAATTCCT",2,16.67,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","T100H C150V F167Q",3
"lib2","SARS-CoV-2","ATTGAGACGTTAACAC",16,99.8,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T46L L60A Y123S Q144I L162C",5
"lib2","SARS-CoV-2","ATTGAGACTACTCACA",3,62.35,9.13,-1.7,0.12,1.69,1.09,0.01,">1 nonsynonymous","D97V A105V K128I",3
"lib2","SARS-CoV-2","ATTGAGAGAAACTCAA",10,136.85,10.82,-0.02,0.06,2.86,1.12,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","ATTGAGAGCATGCCCC",2,69.77,10.73,-0.11,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGAGATAAAATCTA",5,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48D D90N",2
"lib2","SARS-CoV-2","ATTGAGATATTGGTTG",2,14.47,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L5M I28P S45P G86E S139T V181K",6
"lib2","SARS-CoV-2","ATTGAGATGGGAGAAC",4,92.62,10.72,-0.11,0.07,2.87,1.1,0,">1 nonsynonymous","E141S P197T",2
"lib2","SARS-CoV-2","ATTGAGCACGAATTAA",2,12.02,6.2,-4.64,0.31,2.63,1.11,0,">1 nonsynonymous","F17N S45T",2
"lib2","SARS-CoV-2","ATTGAGCATTCCGAAA",5,21.05,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C31H K94L Q144M",3
"lib2","SARS-CoV-2","ATTGAGCCACAGCGAC",7,0.9,NA,NA,NA,NA,NA,NA,"stop","F99T N157*",2
"lib2","SARS-CoV-2","ATTGAGCCATCTAAAA",5,54.6,9.36,-1.47,0.07,1.91,1.05,0,">1 nonsynonymous","G9P W106S",2
"lib2","SARS-CoV-2","ATTGAGCGAACGGCCC",5,160.52,10.36,-0.47,0.03,2.93,1.01,0,">1 nonsynonymous","E10W V173L",2
"lib2","SARS-CoV-2","ATTGAGCGAGCTCATG",5,65.21,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","D68K R78G D90Y",3
"lib2","SARS-CoV-2","ATTGAGCTATATCTTA",3,49.85,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C158V V194D",2
"lib2","SARS-CoV-2","ATTGAGGAACTACCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R A33Y F44R A89D D98G A105V G146E V153T",8
"lib2","SARS-CoV-2","ATTGAGGACTAATCGT",2,5.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N T85V T100S Y143C",4
"lib2","SARS-CoV-2","ATTGAGGATAAAAGTA",5,12.77,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99P W106M",2
"lib2","SARS-CoV-2","ATTGAGGCTATCAACA",6,30.89,6,-4.84,2,1.5,1.33,0.08,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","ATTGAGGGAACTTAGG",11,159.68,10.82,-0.02,0.04,2.92,1.08,0,"1 nonsynonymous","S43W",1
"lib2","SARS-CoV-2","ATTGAGGGATGATCAA",3,117.56,9.34,-1.49,0.14,1.5,1.05,0.01,">1 nonsynonymous","I28L P82G",2
"lib2","SARS-CoV-2","ATTGAGGGCTTTACCA",4,9.14,10.36,-0.47,0.1,2.84,1.19,0.01,"1 nonsynonymous","V32P",1
"lib2","SARS-CoV-2","ATTGAGGGGGCATAGA",3,67.78,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V20P T55H T100S A105S Y123W Y165V P177I",7
"lib2","SARS-CoV-2","ATTGAGGTACAATTAG",2,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T T15N Y93S",3
"lib2","SARS-CoV-2","ATTGAGGTTGACTTTC",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K I88N",2
"lib2","SARS-CoV-2","ATTGAGTAAGCTCCCC",3,5.26,6,-4.84,2,3,1.34,0.02,">1 nonsynonymous","S19K G51R T100L K128I",4
"lib2","SARS-CoV-2","ATTGAGTAATAGAAGT",1,10.28,6.12,-4.72,0.76,3,1.14,0.02,">1 nonsynonymous","A14M Y35S N64S L95H I142R",5
"lib2","SARS-CoV-2","ATTGAGTACCTAAATC",3,89.07,9.59,-1.24,0.06,2.94,1.09,0,">1 nonsynonymous","S43R C61V G166V",3
"lib2","SARS-CoV-2","ATTGAGTCGAGAGTAT",3,19.59,10.14,-0.7,0.08,2.96,1,0,">1 nonsynonymous","D59K Y91H",2
"lib2","SARS-CoV-2","ATTGAGTGAAAGAAAC",3,1.41,NA,NA,NA,NA,NA,NA,"stop","Y50* T55I K87N V115E F134G G172V",6
"lib2","SARS-CoV-2","ATTGAGTGGCGCTCGA",4,28.01,8.76,-2.08,0.17,1.63,1.16,0.02,">1 nonsynonymous","A14W G83L",2
"lib2","SARS-CoV-2","ATTGAGTGTGCCTATC",6,0.68,NA,NA,NA,NA,NA,NA,"stop","T55L A145* F156V L187R",4
"lib2","SARS-CoV-2","ATTGATAACTACACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59F D90V Y175G V181R",4
"lib2","SARS-CoV-2","ATTGATAACTCTCCAA",7,132.87,8.92,-1.91,0.04,2.9,1.05,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","ATTGATAAGCAAGTAT",8,26.56,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F47S I104R P161R",3
"lib2","SARS-CoV-2","ATTGATAATTTAATTG",16,94.07,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","C6A N92T G101H",3
"lib2","SARS-CoV-2","ATTGATACCAAAACGT",4,79.4,10.86,0.02,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGATACTCGTCCTA",2,1.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","ATTGATACTTATGGCA",2,7.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52C Q176Y T201S",3
"lib2","SARS-CoV-2","ATTGATAGTCGCATCT",11,146.23,10.29,-0.55,0.04,2.8,1.04,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","ATTGATAGTTAATTTC",3,36.19,7.27,-3.57,0.35,1.5,1.11,0.04,">1 nonsynonymous","L5F K94I E141Y",3
"lib2","SARS-CoV-2","ATTGATAGTTGATATA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","F17L W106* N110D Y143S",4
"lib2","SARS-CoV-2","ATTGATATAAAAATAG",4,0.67,NA,NA,NA,NA,NA,NA,"stop","R16Y S41* A81G C102V G116R Y121S Q144N Q168Y",8
"lib2","SARS-CoV-2","ATTGATATAGGGTACA",4,70.41,10.84,0.01,0.04,2.89,1.1,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","ATTGATATCAGTACTA",11,0.54,NA,NA,NA,NA,NA,NA,"stop","V37* G83S Y121S N130E",4
"lib2","SARS-CoV-2","ATTGATATTCAGCCAT",11,0.6,NA,NA,NA,NA,NA,NA,"stop","Y119* K128N",2
"lib2","SARS-CoV-2","ATTGATATTCTCCGAT",4,7.8,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y50T D90L F99W G146R",4
"lib2","SARS-CoV-2","ATTGATCAACTCCAAG",1,10.52,6,-4.84,2,3,1.04,0,">1 nonsynonymous","N107V N118H D137E N171R",4
"lib2","SARS-CoV-2","ATTGATCAAGACAGCC",6,48.39,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V71W Y119G A192S S200G",4
"lib2","SARS-CoV-2","ATTGATCACGGCCCAA",7,3.53,NA,NA,NA,NA,NA,NA,"stop","S45L Y50F Y143V N151*",4
"lib2","SARS-CoV-2","ATTGATCAGAAAACTT",3,13.77,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G9D N107V E141W P149C S184A",5
"lib2","SARS-CoV-2","ATTGATCAGAGTGCCG",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y P96C Q176P",3
"lib2","SARS-CoV-2","ATTGATCTAGTTCTAC",3,47.77,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R25T V65F F99E",3
"lib2","SARS-CoV-2","ATTGATCTTAGCTAAA",1,28.67,8.71,-2.13,0.08,2.93,1.03,0,"1 nonsynonymous","N171P",1
"lib2","SARS-CoV-2","ATTGATGAACATCAAA",11,85.38,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y39H V71N",2
"lib2","SARS-CoV-2","ATTGATGGAAATATAA",2,6.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56E P96T Y119I R127V K198I",5
"lib2","SARS-CoV-2","ATTGATGGCCAATAAA",9,61.34,6,-4.84,2,3,1.08,0,">1 nonsynonymous","K56T D112K",2
"lib2","SARS-CoV-2","ATTGATGGTACAAAGC",1,23.9,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T15Y G101V L131S",3
"lib2","SARS-CoV-2","ATTGATGTAAGCATTA",3,37.72,9.48,-1.36,0.12,2.09,1.05,0.01,">1 nonsynonymous","C61P S164Q V182T",3
"lib2","SARS-CoV-2","ATTGATGTCGGCCAAC",3,61.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38C C61N S139H Y175T T201L",5
"lib2","SARS-CoV-2","ATTGATGTGAAACACC",1,0.04,NA,NA,NA,NA,NA,NA,"stop","N13L P82T G86D N92* N107P L122M R136I",7
"lib2","SARS-CoV-2","ATTGATGTGAGATTAC",3,50.05,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C61N F167I",2
"lib2","SARS-CoV-2","ATTGATTAAATGTCGT",16,238.09,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L5C A105M Y121I Q176K",4
"lib2","SARS-CoV-2","ATTGATTAATCCGGAA",6,17.56,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","T100S V103S N120W",3
"lib2","SARS-CoV-2","ATTGATTAATGGTGAA",14,0.55,NA,NA,NA,NA,NA,NA,"stop","N40F K128V P149*",3
"lib2","SARS-CoV-2","ATTGATTATAGAGGGG",6,0,NA,NA,NA,NA,NA,NA,"stop","C6* S53F L60A L162V Q168M",5
"lib2","SARS-CoV-2","ATTGATTCGAGGTAGT",1,50.78,9.69,-1.15,0.06,2.87,1.09,0,">1 nonsynonymous","G9T G174L E186G",3
"lib2","SARS-CoV-2","ATTGATTCGATGGCTA",5,93.27,10.27,-0.56,0.03,2.97,1.03,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","ATTGATTCGCTTGGTA",3,67.68,10.14,-0.7,0.07,2.84,1.07,0,">1 nonsynonymous","A33G P54A I142F",3
"lib2","SARS-CoV-2","ATTGATTTAAGGAAAT",6,62.81,8.46,-2.38,0.13,2.39,1.06,0.01,">1 nonsynonymous","S29G P149C G174V",3
"lib2","SARS-CoV-2","ATTGATTTGGTGATCA",6,0.41,NA,NA,NA,NA,NA,NA,"stop","L5T D97*",2
"lib2","SARS-CoV-2","ATTGATTTTAAAATTC",2,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R F44W S129I G146T V182Y",5
"lib2","SARS-CoV-2","ATTGCAAACAAATCAA",1,12.17,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","C61Q I72L D98Y P161C",4
"lib2","SARS-CoV-2","ATTGCAAATCAAAAAT",4,0.81,NA,NA,NA,NA,NA,NA,"stop","A89* L95S W106G",3
"lib2","SARS-CoV-2","ATTGCAACAAGTACGC",7,6.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M P133L",2
"lib2","SARS-CoV-2","ATTGCAACAGTATTAT",6,68.45,8.51,-2.32,0.12,2.68,1.05,0.01,">1 nonsynonymous","S29M R73S P169N",3
"lib2","SARS-CoV-2","ATTGCAACGCACCTAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","S45T R136P S184*",3
"lib2","SARS-CoV-2","ATTGCAACTGCATGCC",3,39.14,10.56,-0.28,0.05,2.93,1.03,0,">1 nonsynonymous","N1G A33M",2
"lib2","SARS-CoV-2","ATTGCAAGCGCGCTAA",19,162.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61G S69L N107D E141N",4
"lib2","SARS-CoV-2","ATTGCAAGTATCGCTA",1,4.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","ATTGCAATCGCTGCCT",12,137.67,8.11,-2.72,0.1,1.6,1.11,0,">1 nonsynonymous","G146Q T170F G196W",3
"lib2","SARS-CoV-2","ATTGCACAAAAGAGTC",15,228.75,9.38,-1.45,0.03,2.91,1.1,0,">1 nonsynonymous","G117Q P197T",2
"lib2","SARS-CoV-2","ATTGCACACAAACCAA",1,8.33,10.13,-0.71,0.25,2.19,1.18,0.02,"1 nonsynonymous","S139W",1
"lib2","SARS-CoV-2","ATTGCACATAACATGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","ATTGCACCTGCGCTGT",5,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99E V173I T201S",3
"lib2","SARS-CoV-2","ATTGCACGAAGATCGA",1,1.75,NA,NA,NA,NA,NA,NA,"stop","K48* A89R P96F N107A",4
"lib2","SARS-CoV-2","ATTGCACGCAGTTCTA",2,24.19,10.77,-0.07,0.03,2.99,1.05,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","ATTGCACGGAGTCAAA",2,47.38,10.88,0.04,0.05,2.91,1.1,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","ATTGCACTAGCCACAG",5,85.53,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","K48I T63W T85V Y93S G152S",5
"lib2","SARS-CoV-2","ATTGCAGATTATGGCG",12,209.37,9.57,-1.26,0.04,1.89,1.05,0,">1 nonsynonymous","P7I R136L",2
"lib2","SARS-CoV-2","ATTGCAGCAAACCCGG",6,167.27,8.38,-2.45,0.11,2.27,1.08,0,">1 nonsynonymous","C6S D97L S113T",3
"lib2","SARS-CoV-2","ATTGCAGCGAAAGACG",18,93,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F70I D90I T201N",3
"lib2","SARS-CoV-2","ATTGCAGCTTTAATAT",4,42.2,10.42,-0.41,0.06,2.93,1.07,0,">1 nonsynonymous","N1M F156I",2
"lib2","SARS-CoV-2","ATTGCAGTAATCCATC",25,131.31,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L131S E135K G152T",3
"lib2","SARS-CoV-2","ATTGCAGTACCCTTCT",8,97.14,6,-4.84,2,2.49,1.12,0,">1 nonsynonymous","E10H Q84I Y165G",3
"lib2","SARS-CoV-2","ATTGCAGTCAGAATCT",4,0.68,NA,NA,NA,NA,NA,NA,"stop","P7* T15M R78S K128V",4
"lib2","SARS-CoV-2","ATTGCATACGGAAGCT",12,163.7,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R16L P82C P133G",3
"lib2","SARS-CoV-2","ATTGCATATATTGTTC",5,44,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E10T N30R A67R T148S S164L R179T",6
"lib2","SARS-CoV-2","ATTGCATATCTCCATA",3,72.61,9.87,-0.97,0.07,2.53,1.05,0,">1 nonsynonymous","F44L K128I E154M S200V",4
"lib2","SARS-CoV-2","ATTGCATCAAAGTTTT",3,48.11,10.6,-0.24,0.05,2.96,1.03,0,">1 nonsynonymous","C61K R78C",2
"lib2","SARS-CoV-2","ATTGCATCTTCAAACC",2,32.97,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","K199M",1
"lib2","SARS-CoV-2","ATTGCATTAAGGCATT",8,23.19,9.61,-1.23,0.19,1.79,1.06,0.02,">1 nonsynonymous","V20T C61A T85A",3
"lib2","SARS-CoV-2","ATTGCATTACACAAGC",4,15.92,8.36,-2.47,0.25,1.5,1.02,0.03,">1 nonsynonymous","T55N Q84K N118S N157H",4
"lib2","SARS-CoV-2","ATTGCATTATCAGTTT",2,7.58,9.74,-1.09,0.14,2.82,1.15,0.01,">1 nonsynonymous","C31Q Y178F",2
"lib2","SARS-CoV-2","ATTGCATTCTAAAAAT",5,30.82,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R25M L95W N120K",3
"lib2","SARS-CoV-2","ATTGCCAATCTACTTT",2,11.61,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15F L57K",2
"lib2","SARS-CoV-2","ATTGCCACAAAGGCTA",7,48.64,7.4,-3.44,0.34,1.5,1.1,0.03,">1 nonsynonymous","F8W Y50S P82V",3
"lib2","SARS-CoV-2","ATTGCCACCCCTATCA",2,46.8,10.57,-0.27,0.07,2.84,1.15,0,">1 nonsynonymous","N151P T201A",2
"lib2","SARS-CoV-2","ATTGCCACCTCCATAT",4,128.86,10.68,-0.15,0.04,2.95,1.07,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","ATTGCCACTAAGTAAG",3,45.4,10.76,-0.07,0.07,2.83,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTGCCAGGCCATTGT",5,15.43,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","I104G Y119L",2
"lib2","SARS-CoV-2","ATTGCCATAACTATGA",8,76.98,8.27,-2.57,0.12,2.66,1.11,0.01,">1 nonsynonymous","S129P G146R F156L",3
"lib2","SARS-CoV-2","ATTGCCCATATACTAC",9,111.26,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","V20H",1
"lib2","SARS-CoV-2","ATTGCCCATTACACCC",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104S Q176P",2
"lib2","SARS-CoV-2","ATTGCCCATTGTCTAT",2,283.87,8.62,-2.22,0.07,2.8,1.06,0,">1 nonsynonymous","D98T T170V",2
"lib2","SARS-CoV-2","ATTGCCCCAGTGTCAC",3,6.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E T85G",2
"lib2","SARS-CoV-2","ATTGCCCCGGGTATAA",1,25.66,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y66L K87R Y123A R127L",4
"lib2","SARS-CoV-2","ATTGCCCCTCCACCAA",2,36.94,10.86,0.02,0.07,2.83,1.13,0,">1 nonsynonymous","L5G F8L K199D",3
"lib2","SARS-CoV-2","ATTGCCCTAAGAGTGA",2,13.58,6,-4.84,2,1.5,1.16,0.08,">1 nonsynonymous","L5N K56C N92L",3
"lib2","SARS-CoV-2","ATTGCCCTAATCTCGC",19,355.97,9.58,-1.25,0.07,2.62,1.06,0,">1 nonsynonymous","K114Y G155I",2
"lib2","SARS-CoV-2","ATTGCCGAGGGAGTAT",9,191.51,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F8R R124P Y178V",3
"lib2","SARS-CoV-2","ATTGCCGCCCCCCTGC",6,230.07,9.7,-1.14,0.02,2.84,1.03,0,">1 nonsynonymous","P149Q G155F",2
"lib2","SARS-CoV-2","ATTGCCTAAACGCATA",1,9.25,6,-4.84,1.57,3,1.19,0.02,">1 nonsynonymous","C49G P54S G117A Y175T",4
"lib2","SARS-CoV-2","ATTGCCTATTTGACCC",3,24.72,10.74,-0.09,0.05,2.85,1.16,0,"1 nonsynonymous","V153F",1
"lib2","SARS-CoV-2","ATTGCCTCGAGGCTAA",9,119.97,10.01,-0.83,0.08,2.25,1.02,0,">1 nonsynonymous","G9W V52Q",2
"lib2","SARS-CoV-2","ATTGCCTGAAACCATT",10,103.3,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86E L122S I138P",3
"lib2","SARS-CoV-2","ATTGCCTTCTCTGTTA",9,198.25,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5C L38H K114R R127L F160K",5
"lib2","SARS-CoV-2","ATTGCGAAAGTTCACG",9,40.46,8.46,-2.38,0.2,1.5,1.09,0.02,">1 nonsynonymous","L60R V77S K87Y",3
"lib2","SARS-CoV-2","ATTGCGAACGCCTTAG",4,31.26,10.58,-0.26,0.04,2.88,1.11,0,"1 nonsynonymous","I104A",1
"lib2","SARS-CoV-2","ATTGCGAATCTCTAAC",3,23.51,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N4M P96S V103R S108Y",4
"lib2","SARS-CoV-2","ATTGCGACACCATTAC",5,147.14,8.22,-2.62,0.11,2.33,1.09,0,">1 nonsynonymous","A105G G166E",2
"lib2","SARS-CoV-2","ATTGCGACACTAGGCA",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F G51Y G83Y R124S",4
"lib2","SARS-CoV-2","ATTGCGATGGCACTGA",3,54.03,10.71,-0.12,0.05,2.96,1.03,0,"1 nonsynonymous","W23F",1
"lib2","SARS-CoV-2","ATTGCGATGTATCCGT",3,17.87,6.3,-4.53,0.65,1.5,1.11,0.03,">1 nonsynonymous","A105R R127E",2
"lib2","SARS-CoV-2","ATTGCGCAAGTCGTTA",1,27.25,9.11,-1.73,0.17,1.77,1.16,0.01,">1 nonsynonymous","N30V G83S",2
"lib2","SARS-CoV-2","ATTGCGCGATCAATAA",12,79.38,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y93S N107C",2
"lib2","SARS-CoV-2","ATTGCGCTTAAACAAG",1,16.17,10.96,0.13,0.13,2.85,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATTGCGGCAAACGAGC",4,23.91,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","N4L P133V Y165E",3
"lib2","SARS-CoV-2","ATTGCGTGCTGCCAAG",7,44.42,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19F S43D T63F E76T P161L P191S",6
"lib2","SARS-CoV-2","ATTGCTAAATTAACAA",7,39.27,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","Y50I D90N I104K A145G T201I",5
"lib2","SARS-CoV-2","ATTGCTAACAATAACA",3,48.81,9.26,-1.58,0.13,1.81,1.06,0.01,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","ATTGCTAAGTTAAAAG",9,154.79,10.2,-0.63,0.03,2.93,1.03,0,">1 nonsynonymous","C31P L60T",2
"lib2","SARS-CoV-2","ATTGCTAATTAATGAA",2,41.22,10.77,-0.07,0.05,2.94,1.08,0,"1 nonsynonymous","S43T",1
"lib2","SARS-CoV-2","ATTGCTAGACGACAAA",2,29.66,6,-4.84,1.93,1.95,1.17,0.01,">1 nonsynonymous","F17G F99L I104L",3
"lib2","SARS-CoV-2","ATTGCTAGAGACTGTA",1,8.38,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T55F L95Q L125P Q168R L187Y",5
"lib2","SARS-CoV-2","ATTGCTAGGGCTTAAA",9,192.89,10.36,-0.47,0.03,2.89,1.04,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","ATTGCTAGTAACCTCA",19,136.17,9.8,-1.03,0.06,2.38,1.09,0,">1 nonsynonymous","A18S S41D N130W G152C",4
"lib2","SARS-CoV-2","ATTGCTAGTATACGTC",6,8.22,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","T15C G86F S184A",3
"lib2","SARS-CoV-2","ATTGCTATATTCCACC",11,2.63,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","ATTGCTCACCTAAGTA",6,56.85,8.08,-2.75,0.16,2.1,1.05,0.01,">1 nonsynonymous","S43I D90Y N157R S164K S200M",5
"lib2","SARS-CoV-2","ATTGCTCCACATAGAG",2,29.21,10.48,-0.35,0.08,2.9,1.12,0,">1 nonsynonymous","P54S N151V",2
"lib2","SARS-CoV-2","ATTGCTCCTTATTACA",5,57.26,10.53,-0.3,0.05,2.93,1.09,0,">1 nonsynonymous","A33P Y39Q",2
"lib2","SARS-CoV-2","ATTGCTCTAAAAACAG",6,82.92,10.7,-0.13,0.13,2.62,1.09,0.01,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","ATTGCTGATATATTTA",9,85.73,10.11,-0.73,0.04,2.84,1.01,0,">1 nonsynonymous","L5R N58Y F160T",3
"lib2","SARS-CoV-2","ATTGCTGGGCTACTTG",2,47.9,8.63,-2.21,0.08,2.55,1.03,0,">1 nonsynonymous","D90L P169C",2
"lib2","SARS-CoV-2","ATTGCTTAAAAACAGT",8,1.91,NA,NA,NA,NA,NA,NA,"stop","A22* T85E W106F F167I V173T",5
"lib2","SARS-CoV-2","ATTGCTTAGGTATTAT",2,18.2,10.81,-0.03,0.06,3,1.01,0,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","ATTGCTTATATTGCTT",7,246.31,10.49,-0.35,0.04,2.9,1.07,0,">1 nonsynonymous","T55Y D98L",2
"lib2","SARS-CoV-2","ATTGCTTCAATCTTGT",2,20.67,9.53,-1.31,0.11,2.75,1.15,0,">1 nonsynonymous","G117C L188E",2
"lib2","SARS-CoV-2","ATTGCTTGAACGCTAA",6,87.14,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7S S36L V77G",3
"lib2","SARS-CoV-2","ATTGCTTTAAAGCGCT",1,14.26,7.15,-3.69,0.41,1.5,1.12,0.03,">1 nonsynonymous","D68S K128V S184H",3
"lib2","SARS-CoV-2","ATTGCTTTAAGAGAAA",8,106.82,8.23,-2.6,0.11,2.31,1.05,0.01,">1 nonsynonymous","Y119V P161S",2
"lib2","SARS-CoV-2","ATTGGAAATCCATTTG",6,49.96,9.32,-1.52,0.12,1.73,1.08,0.01,">1 nonsynonymous","P54A P82S",2
"lib2","SARS-CoV-2","ATTGGAACGGTCAATG",2,17.15,9.44,-1.39,0.23,2.2,1.01,0.02,">1 nonsynonymous","N40I N64S V181K",3
"lib2","SARS-CoV-2","ATTGGAACTATTAAGG",6,127.72,9.88,-0.96,0.08,2.36,1.05,0,">1 nonsynonymous","T85M D90V T201V",3
"lib2","SARS-CoV-2","ATTGGAAGGAAAAATA",1,47.19,8.57,-2.27,0.22,2.15,1.23,0.02,">1 nonsynonymous","D34N S139N N157H",3
"lib2","SARS-CoV-2","ATTGGAATAGATAAAG",7,76.02,9.74,-1.1,0.06,2.01,1.05,0,">1 nonsynonymous","L60V W106V F160S",3
"lib2","SARS-CoV-2","ATTGGACAACATGATA",3,82.95,10.8,-0.04,0.04,2.97,1.04,0,"1 nonsynonymous","E141H",1
"lib2","SARS-CoV-2","ATTGGACAGAGTGAAA",4,135.72,10.4,-0.44,0.04,2.75,1.05,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","ATTGGACATATATTCG",3,49.76,9.25,-1.58,0.14,2.64,1.08,0.01,">1 nonsynonymous","F44N L60F I104W",3
"lib2","SARS-CoV-2","ATTGGACATTAAGCAA",2,23.68,8.07,-2.77,0.37,1.5,1.05,0.06,">1 nonsynonymous","I28K D59P S147R P149T N157Q",5
"lib2","SARS-CoV-2","ATTGGACCCTGCAAAA",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83N V103D C158M P177H",4
"lib2","SARS-CoV-2","ATTGGACGAAATTAGT",3,72.26,8.07,-2.76,0.12,1.77,1.12,0,">1 nonsynonymous","G86A F156L",2
"lib2","SARS-CoV-2","ATTGGACGCACCAGTA",3,8.52,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","W23K V32R D98L C150L",4
"lib2","SARS-CoV-2","ATTGGAGAAAGAATAT",7,234.34,10.77,-0.07,0.02,2.94,1.07,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","ATTGGAGAGCCAATTG",2,5.27,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C49Y L125Q S184D T201Y",4
"lib2","SARS-CoV-2","ATTGGAGATATTGTGT",3,7.95,6,-4.84,2,3,1.03,0,">1 nonsynonymous","Y39K E76D P82K G101E",4
"lib2","SARS-CoV-2","ATTGGAGCTAAAAATC",4,1.98,NA,NA,NA,NA,NA,NA,"stop","P54* F62P D90* G155R",4
"lib2","SARS-CoV-2","ATTGGAGTAAACACGC",7,1.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138Q",1
"lib2","SARS-CoV-2","ATTGGAGTGGTATGTG",2,26.18,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","F44A N92V",2
"lib2","SARS-CoV-2","ATTGGATACCCTTTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7T R16A V52A K87W D97* V103N N130Q Y165E",8
"lib2","SARS-CoV-2","ATTGGATATTCAACTA",5,38.28,9.81,-1.03,0.1,2.15,1.02,0,">1 nonsynonymous","N120R E135L E154R",3
"lib2","SARS-CoV-2","ATTGGATCCTTATTCA",4,102.31,10.75,-0.08,0.03,2.94,1.06,0,">1 nonsynonymous","S41V V153R T201P",3
"lib2","SARS-CoV-2","ATTGGCAAAAGAGCCT",10,41.92,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","Y50G I104V I142R",3
"lib2","SARS-CoV-2","ATTGGCAACCTCACCC",3,13.08,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10G L60Q D97P A105R S113Y",5
"lib2","SARS-CoV-2","ATTGGCAACTACCCCC",9,91.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44L S69T I88R",3
"lib2","SARS-CoV-2","ATTGGCCAAATTGCAG",3,10.89,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","T15K N92S R136T A190V",4
"lib2","SARS-CoV-2","ATTGGCGAATAAAAAC",3,59.75,8.64,-2.2,0.14,1.73,1.05,0.01,">1 nonsynonymous","G9W R127L",2
"lib2","SARS-CoV-2","ATTGGCGACGGAACTG",3,46.91,10.35,-0.49,0.05,2.84,1.05,0,"1 nonsynonymous","Q84F",1
"lib2","SARS-CoV-2","ATTGGCGATGGAGTAG",4,109.77,10.39,-0.44,0.04,2.95,1.03,0,">1 nonsynonymous","C61Y T140G",2
"lib2","SARS-CoV-2","ATTGGCGCACATAAAT",4,0.6,NA,NA,NA,NA,NA,NA,"stop","G86E R127* F167H",3
"lib2","SARS-CoV-2","ATTGGCTAACAATAAG",2,0.93,NA,NA,NA,NA,NA,NA,"stop","F12L N58D T100M F167* S200L",5
"lib2","SARS-CoV-2","ATTGGCTCACGACACA",4,96.07,10.48,-0.35,0.05,2.76,1.06,0,"1 nonsynonymous","E10I",1
"lib2","SARS-CoV-2","ATTGGCTCCAAGACAG",10,221.93,10.8,-0.03,0.06,2.95,1.05,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","ATTGGCTCGCACAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","K114* Y143F S164A",3
"lib2","SARS-CoV-2","ATTGGCTCTGGAATAC",1,13.66,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C31K F70V G86Y",3
"lib2","SARS-CoV-2","ATTGGGAAGCTGTACT",8,100.62,10.46,-0.37,0.04,2.9,1.05,0,">1 nonsynonymous","T3I G152T",2
"lib2","SARS-CoV-2","ATTGGGACACGCAGTA",3,48.42,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N1D K56D S69L G83S G116L G174L",6
"lib2","SARS-CoV-2","ATTGGGAGCAGAAACT",4,16.95,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G83D V103W",2
"lib2","SARS-CoV-2","ATTGGGATCGTATGCC",5,69.84,10.03,-0.8,0.08,2.66,1.01,0,">1 nonsynonymous","Y35I V65E T201W",3
"lib2","SARS-CoV-2","ATTGGGATGAGGCCTA",1,17.75,9.64,-1.19,0.09,2.02,1.11,0,">1 nonsynonymous","T3D P96R N110T",3
"lib2","SARS-CoV-2","ATTGGGCAAGCGATCT",3,92.43,10.85,0.01,0.04,2.85,1.12,0,">1 nonsynonymous","I2R S129N",2
"lib2","SARS-CoV-2","ATTGGGCAGAAGTGAT",1,18.35,NA,NA,NA,NA,NA,NA,"stop","E10* W23C D34F G155R",4
"lib2","SARS-CoV-2","ATTGGGCATACGAAAT",3,18.56,7.64,-3.19,0.14,2.59,1.08,0.01,">1 nonsynonymous","K48Q T55A S113L A190S",4
"lib2","SARS-CoV-2","ATTGGGCTTAAAAGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","F8S D112*",2
"lib2","SARS-CoV-2","ATTGGGCTTAACAAGT",1,51.24,9.16,-1.67,0.07,2.96,1.03,0,">1 nonsynonymous","I28F N110K G116E V153G Q168L",5
"lib2","SARS-CoV-2","ATTGGGGACTTACCGA",2,8.91,10.33,-0.51,0.08,2.79,1.08,0,">1 nonsynonymous","N4P E10L",2
"lib2","SARS-CoV-2","ATTGGGGAGTATAATG",3,5.66,9.02,-1.82,0.25,1.5,1.08,0.02,">1 nonsynonymous","P96L K114R",2
"lib2","SARS-CoV-2","ATTGGGGGCCTCTCAC",1,26.07,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S36I P96Q Q176S P197K",4
"lib2","SARS-CoV-2","ATTGGTAAAATACAAT",3,91.49,10.24,-0.6,0.05,2.77,1.06,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","ATTGGTAACTCCAAAA",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T V65S V103P A192T",4
"lib2","SARS-CoV-2","ATTGGTAATTGCACCC",2,11.5,8.84,-1.99,0.17,2.93,1.14,0.01,">1 nonsynonymous","G152L T170E S200L",3
"lib2","SARS-CoV-2","ATTGGTAGAACAATTG",10,107.32,10.15,-0.68,0.06,2.68,1.01,0,">1 nonsynonymous","K94C S147R",2
"lib2","SARS-CoV-2","ATTGGTAGCTTTCATA",2,22.74,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V71L N92T L125P V153I Q176S",5
"lib2","SARS-CoV-2","ATTGGTATACGCTTTT",3,26.96,9.83,-1,0.1,2.04,1,0,">1 nonsynonymous","L5T A18S G51D Y123H",4
"lib2","SARS-CoV-2","ATTGGTCCCGTACAAT",2,23.75,10.55,-0.29,0.09,2.94,1.1,0.01,">1 nonsynonymous","F160R G174R",2
"lib2","SARS-CoV-2","ATTGGTGGCGGGAGTT",9,109.16,10.93,0.09,0.05,2.93,1.07,0,">1 nonsynonymous","N1G G9N V173L H189Y",4
"lib2","SARS-CoV-2","ATTGGTGTGATCATTT",4,14.39,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","F12G S41V F62S D137E V181F",5
"lib2","SARS-CoV-2","ATTGGTTAGACACGTA",6,43.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7L R179D",2
"lib2","SARS-CoV-2","ATTGTAAAAAAATGAC",10,6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","ATTGTAAAATGGATCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N Y50C Q84H A105N",4
"lib2","SARS-CoV-2","ATTGTAAAGAAAAATG",3,41.71,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T63S N120W C150R V173F",4
"lib2","SARS-CoV-2","ATTGTAAAGCACGTGT",7,74.91,6,-4.84,1.24,1.5,1.15,0.01,">1 nonsynonymous","K48V P82K K87A D98G",4
"lib2","SARS-CoV-2","ATTGTAACCGCGAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S53T C61* K199I",3
"lib2","SARS-CoV-2","ATTGTAACCTGATCGT",1,6.41,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","T3D Y39P F44H D68V K132S",5
"lib2","SARS-CoV-2","ATTGTAAGCGTTGATT",17,4.32,NA,NA,NA,NA,NA,NA,"stop","N30* V37F F44D T63G G86A L122*",6
"lib2","SARS-CoV-2","ATTGTAAGCTTTATCC",2,6.31,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D34E D68V I80L A89C R124Q N171S",6
"lib2","SARS-CoV-2","ATTGTAATATAAGACA",1,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N58F F99A S108I F156H",5
"lib2","SARS-CoV-2","ATTGTAATATGCCCTC",6,69.46,6.09,-4.75,1.25,1.5,1.17,0.04,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","ATTGTAATCCGTCAAG",6,0.33,NA,NA,NA,NA,NA,NA,"stop","S53I Y66A V77C N109A Y123*",5
"lib2","SARS-CoV-2","ATTGTAATGAAAAGAA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R P149S G166L",3
"lib2","SARS-CoV-2","ATTGTAATGAATCTTG",10,31.63,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V11G K87N Y93R C102E",4
"lib2","SARS-CoV-2","ATTGTAATGAGCCTAG",16,183.21,10.81,-0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGTAATTCGACTAG",9,220.87,10.3,-0.54,0.05,2.85,1.06,0,">1 nonsynonymous","S41D V180L",2
"lib2","SARS-CoV-2","ATTGTACAAATAATTT",2,39.71,7.35,-3.49,0.2,1.5,1.07,0.01,">1 nonsynonymous","S113H N118C",2
"lib2","SARS-CoV-2","ATTGTACACCCCCCCT",10,151.27,10.48,-0.36,0.04,2.94,1.07,0,"1 nonsynonymous","N58L",1
"lib2","SARS-CoV-2","ATTGTACAGAATAGCC",1,21.55,8.33,-2.5,0.08,2.31,1.07,0,">1 nonsynonymous","G117P P133S",2
"lib2","SARS-CoV-2","ATTGTACAGGGTCAAA",4,18.43,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N4R C49R D98P T170F",4
"lib2","SARS-CoV-2","ATTGTACGCTCCTGCA",5,12.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y C61N A81I",3
"lib2","SARS-CoV-2","ATTGTACGGTAGCTAT",4,37.83,9.15,-1.69,0.04,2.9,1.1,0,">1 nonsynonymous","Y119D G196L",2
"lib2","SARS-CoV-2","ATTGTACTCTTAGGCA",6,62.27,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4Y S43D S53L L95A Y119S F134C V153S C158S",8
"lib2","SARS-CoV-2","ATTGTAGGCGTCACTA",1,14.47,10.62,-0.22,0.08,2.94,1.02,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","ATTGTAGTCTGCTTTC",2,38.69,10.18,-0.65,0.03,2.99,1.02,0,">1 nonsynonymous","G9A G152I",2
"lib2","SARS-CoV-2","ATTGTATAAGAATACG",1,42.43,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6L S53P L95I T100Y S139F",5
"lib2","SARS-CoV-2","ATTGTATAGAACTCTA",8,0.91,NA,NA,NA,NA,NA,NA,"stop","P82* K128Y",2
"lib2","SARS-CoV-2","ATTGTATAGATCCTCT",1,1.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147A",1
"lib2","SARS-CoV-2","ATTGTATAGGAGTGGA",13,1.29,NA,NA,NA,NA,NA,NA,"stop","Q84* S113G N118V",3
"lib2","SARS-CoV-2","ATTGTATATTAAAAAG",8,0.11,NA,NA,NA,NA,NA,NA,"stop","T3* V37L K128M Y175M",4
"lib2","SARS-CoV-2","ATTGTATCGATACAAA",1,8.46,6,-4.84,2,3,1,0,">1 nonsynonymous","I2F A14M F99K K128F",4
"lib2","SARS-CoV-2","ATTGTATGAATTAACA",3,36.12,6,-4.84,2,3,1.11,0,">1 nonsynonymous","P82L P96D D98Y F134T F160L",5
"lib2","SARS-CoV-2","ATTGTATGATATTACA",1,8.02,10.76,-0.08,0.09,2.77,1.25,0.01,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","ATTGTATTAGATAAAT",3,25.11,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I28S A42C E141P F185N",4
"lib2","SARS-CoV-2","ATTGTATTGGGAGGCA",8,100.46,10.81,-0.03,0.07,2.88,1.1,0,"1 nonsynonymous","V52L",1
"lib2","SARS-CoV-2","ATTGTCAAACTTTTAA",9,2.17,NA,NA,NA,NA,NA,NA,"stop","Y121* T170S",2
"lib2","SARS-CoV-2","ATTGTCAACAAAGACG",10,101.63,7.94,-2.9,0.12,2.11,1.09,0.01,">1 nonsynonymous","N1R C61N Y143S T148F",4
"lib2","SARS-CoV-2","ATTGTCAATCTCATTG",11,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H F99S",2
"lib2","SARS-CoV-2","ATTGTCACCAATACTG",10,182.43,8.84,-2,0.05,2.78,1.08,0,">1 nonsynonymous","A33M F62S Q168L",3
"lib2","SARS-CoV-2","ATTGTCAGGCTCGAAC",9,47.4,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5Y F99I K114M R127C S147Y",5
"lib2","SARS-CoV-2","ATTGTCATGGCTAATC",7,14.74,NA,NA,NA,NA,NA,NA,"stop","L5I T63* V71C I88A N157P",5
"lib2","SARS-CoV-2","ATTGTCATTAATACCC",14,112.68,9.7,-1.14,0.06,2.29,1.05,0,">1 nonsynonymous","S45G K114M Y121F K128H P149R",5
"lib2","SARS-CoV-2","ATTGTCATTCGAAAAA",3,71.27,10.17,-0.67,0.07,2.54,1.03,0,">1 nonsynonymous","T3W A18V",2
"lib2","SARS-CoV-2","ATTGTCCGAAGTTTTG",5,57.27,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23I N30W D97H V103T",4
"lib2","SARS-CoV-2","ATTGTCCTGCCTAATC",1,1.27,NA,NA,NA,NA,NA,NA,"stop","E76M K128* S139P P161C",4
"lib2","SARS-CoV-2","ATTGTCGAACAACACA",2,33.05,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11G C61V Y91W N157P",4
"lib2","SARS-CoV-2","ATTGTCGAGCACGGGC",4,19.17,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y35T I104D K128P",3
"lib2","SARS-CoV-2","ATTGTCTAAACCCTAA",1,1.67,NA,NA,NA,NA,NA,NA,"stop","N4* S129C V153Y",3
"lib2","SARS-CoV-2","ATTGTCTATGACATAA",1,7.26,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","A14W A22V N30L N40A S53P Q168Y",6
"lib2","SARS-CoV-2","ATTGTCTCAAAAGATA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5C A105T N120L Y175*",4
"lib2","SARS-CoV-2","ATTGTCTCAAACTTGA",7,36.32,9.75,-1.08,0.16,1.83,1.06,0.01,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","ATTGTCTGGAAAAATC",21,181.96,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y35N K94T R127C G196S",4
"lib2","SARS-CoV-2","ATTGTCTTTTAGAACT",2,27.06,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","Y35R S45C G101S",3
"lib2","SARS-CoV-2","ATTGTGAAAAACGATC",2,28.29,6.89,-3.95,0.45,1.5,1.03,0.06,">1 nonsynonymous","G51L P133R",2
"lib2","SARS-CoV-2","ATTGTGAAAACATGTG",7,45.93,9.89,-0.95,0.09,2.53,1,0,">1 nonsynonymous","S41L N64W S69T Q144R",4
"lib2","SARS-CoV-2","ATTGTGAATTTGAGGC",14,151.58,10.78,-0.05,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGTGACTACAAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Q Y35N C49S Q84P",4
"lib2","SARS-CoV-2","ATTGTGACTATGCATA",11,153.44,9.72,-1.11,0.04,2.84,1.08,0,">1 nonsynonymous","L125T T201M",2
"lib2","SARS-CoV-2","ATTGTGAGAAGTTTGT",14,129.49,8.19,-2.65,0.14,1.5,1.07,0.01,">1 nonsynonymous","Y35S N107E F160P N171T",4
"lib2","SARS-CoV-2","ATTGTGAGTTCGCCAT",2,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A C49V A81K S147P Y178W",5
"lib2","SARS-CoV-2","ATTGTGATACGAGGGA",2,78.44,8.49,-2.34,0.32,1.56,1.14,0.03,">1 nonsynonymous","T3W V37S C61F I138Y T170D",5
"lib2","SARS-CoV-2","ATTGTGATCCCCCACC",5,12.67,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","L95D S108E",2
"lib2","SARS-CoV-2","ATTGTGATGAACGGTA",1,2.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82G",1
"lib2","SARS-CoV-2","ATTGTGCATCAACCAA",1,13.2,9.69,-1.15,0.21,1.86,1.39,0.02,">1 nonsynonymous","N4A L60P A81E T201G",4
"lib2","SARS-CoV-2","ATTGTGCCACATCCTC",3,10.32,7.06,-3.77,0.4,3,1.06,0.02,">1 nonsynonymous","A89Y D98P R136I",3
"lib2","SARS-CoV-2","ATTGTGCCACGCAAGT",3,36.29,10.73,-0.11,0.06,2.96,1.06,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","ATTGTGCGCGTTTACA",5,13.83,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","N13S V32L T55W T85E Y165C T201H",6
"lib2","SARS-CoV-2","ATTGTGGATTAGATCA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","N40* T55N Y175C",3
"lib2","SARS-CoV-2","ATTGTGTCGATTATGG",1,10.73,10.36,-0.48,0.25,2.59,1,0.01,">1 nonsynonymous","P7V A14N N109V G174N",4
"lib2","SARS-CoV-2","ATTGTGTTCCAAGATT",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F C102V S129M T140N P169V",5
"lib2","SARS-CoV-2","ATTGTTAACGACAAAC",9,130.67,9.47,-1.36,0.07,1.94,1.05,0,">1 nonsynonymous","F17Q A67I",2
"lib2","SARS-CoV-2","ATTGTTACAGAAACAA",2,40.17,10.84,0,0.05,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGTTACTGGCAGCA",3,2.21,NA,NA,NA,NA,NA,NA,"stop","F62S Q84Y Y143*",3
"lib2","SARS-CoV-2","ATTGTTACTTGCCTAA",3,23.28,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V32L A42R C150L",3
"lib2","SARS-CoV-2","ATTGTTAGAAACTTAT",4,30.31,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","V20Y F70Y",2
"lib2","SARS-CoV-2","ATTGTTAGACACGTAA",2,25.85,7.91,-2.93,0.44,1.5,1.04,0.05,">1 nonsynonymous","A67T N120P K132D",3
"lib2","SARS-CoV-2","ATTGTTAGAGCAAGTC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","G83E E135*",2
"lib2","SARS-CoV-2","ATTGTTAGTATCTTCT",2,83.47,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V11H C49V S164P Y178I",4
"lib2","SARS-CoV-2","ATTGTTATCTTAGATA",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T S45P Y123S",3
"lib2","SARS-CoV-2","ATTGTTCAAGAATTAC",4,55.57,10.78,-0.06,0.07,2.97,1.07,0,"1 nonsynonymous","K132G",1
"lib2","SARS-CoV-2","ATTGTTCCTGCATTCC",2,50.12,10.74,-0.1,0.11,2.66,1.21,0.01,"1 nonsynonymous","V173Y",1
"lib2","SARS-CoV-2","ATTGTTCGGACGGTTG",16,71.33,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","E10C S43L T85P I104R P177G",5
"lib2","SARS-CoV-2","ATTGTTCTAATCCTTG",7,2.81,NA,NA,NA,NA,NA,NA,"stop","T3L Y119* S139W",3
"lib2","SARS-CoV-2","ATTGTTGAACCTCTTG",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57M P197T",2
"lib2","SARS-CoV-2","ATTGTTGAACTCCACC",9,54.57,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C49S D90N Y119V",3
"lib2","SARS-CoV-2","ATTGTTGAAGAATAGG",9,72.36,10.85,0.02,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTGTTGACGACCACC",16,205.69,9.64,-1.2,0.05,1.96,1.06,0,">1 nonsynonymous","A105Q T201A",2
"lib2","SARS-CoV-2","ATTGTTGATATTCGTC",7,100.19,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","ATTGTTTACTTTCCGG",6,79.95,9.27,-1.56,0.07,1.96,1.08,0,">1 nonsynonymous","S19P Y91L N130R S184R",4
"lib2","SARS-CoV-2","ATTGTTTAGATATAGA",6,58.7,10.71,-0.13,0.05,2.89,1.03,0,">1 nonsynonymous","A42N R136Q",2
"lib2","SARS-CoV-2","ATTGTTTGGATAGGTA",10,2.06,NA,NA,NA,NA,NA,NA,"stop","P82S Y121D V182*",3
"lib2","SARS-CoV-2","ATTGTTTGTGGCAGAA",1,39.78,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V11P A105D",2
"lib2","SARS-CoV-2","ATTGTTTTCGGATCCT",2,52.26,10.75,-0.09,0.1,2.66,1.12,0,"1 nonsynonymous","F62C",1
"lib2","SARS-CoV-2","ATTGTTTTGCCGCCCT",7,34.62,8.6,-2.23,0.14,1.65,1.11,0.01,">1 nonsynonymous","F17Q C61F",2
"lib2","SARS-CoV-2","ATTTAAAAATCGACGT",5,8.72,NA,NA,NA,NA,NA,NA,"stop","I2* P7L D90H",3
"lib2","SARS-CoV-2","ATTTAAAAATCTAAAA",1,37.82,10.76,-0.07,0.08,2.83,1.14,0,"1 nonsynonymous","K56T",1
"lib2","SARS-CoV-2","ATTTAAAACAAACCAC",6,101.32,10.8,-0.04,0.05,2.96,1.06,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","ATTTAAAACGCTTCAA",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65K G152T",2
"lib2","SARS-CoV-2","ATTTAAAAGCCTTACG",10,2,NA,NA,NA,NA,NA,NA,"stop","A22L S36R T85A L131R G146R Q176*",6
"lib2","SARS-CoV-2","ATTTAAAATACGTCTA",6,70.6,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6R R25F V77G R124V F160V",5
"lib2","SARS-CoV-2","ATTTAAACAAACTTTT",8,79.11,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y39I L60Y D68L F156Q",4
"lib2","SARS-CoV-2","ATTTAAACAAATAGTT",6,30.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58Y A89Y P191L",3
"lib2","SARS-CoV-2","ATTTAAACCGATCATT",7,81.73,6.75,-4.08,0.51,1.5,1.19,0.03,">1 nonsynonymous","C61H Q144V Q176L",3
"lib2","SARS-CoV-2","ATTTAAACGATATAGC",3,83.24,10.14,-0.69,0.07,2.54,1.05,0,">1 nonsynonymous","N4Y P133E",2
"lib2","SARS-CoV-2","ATTTAAACGCTTATTT",3,33.37,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","ATTTAAACTCAGTAAA",2,30.46,10.83,0,0.1,2.79,1.24,0,"1 nonsynonymous","S139T",1
"lib2","SARS-CoV-2","ATTTAAAGATAAGCGT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","A22M Q84* I88* L125T",4
"lib2","SARS-CoV-2","ATTTAAATAAATATAG",2,39.23,9.01,-1.83,0.19,1.68,1.08,0.02,">1 nonsynonymous","G9C L38S",2
"lib2","SARS-CoV-2","ATTTAAATCAAGATAT",13,99.95,9.15,-1.68,0.08,1.65,1.05,0,">1 nonsynonymous","G9M N40V K128E N130C G196M",5
"lib2","SARS-CoV-2","ATTTAAATCCTGGACT",10,110.06,8.83,-2,0.07,1.67,1.14,0,">1 nonsynonymous","T55C G83V E141L",3
"lib2","SARS-CoV-2","ATTTAAATCGCAACTA",3,12.77,10.82,-0.02,0.07,3,1.02,0,">1 nonsynonymous","F8Y T63A T148R S200H",4
"lib2","SARS-CoV-2","ATTTAAATTCAGCGTT",2,10.07,10.47,-0.36,0.16,2.64,1.03,0.01,">1 nonsynonymous","L5I N13F T55Q K128L P197L",5
"lib2","SARS-CoV-2","ATTTAACAATACTTTA",9,91.63,9.52,-1.32,0.07,2.19,1.04,0,">1 nonsynonymous","N13C C31V K114M",3
"lib2","SARS-CoV-2","ATTTAACACTCTCGAC",5,101.49,9.91,-0.92,0.08,2.15,1.06,0,"1 nonsynonymous","G51W",1
"lib2","SARS-CoV-2","ATTTAACATTTAAGCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105R G174L",2
"lib2","SARS-CoV-2","ATTTAACCCGATCTCC",11,61.81,9.95,-0.89,0.07,2.32,1.05,0,">1 nonsynonymous","N1I D90G",2
"lib2","SARS-CoV-2","ATTTAACCCTAATAAA",4,44.64,10.33,-0.51,0.16,2.73,1.04,0.01,"1 nonsynonymous","A81H",1
"lib2","SARS-CoV-2","ATTTAACCTAGTAACA",1,15.96,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9K Y66K W106G G174E",4
"lib2","SARS-CoV-2","ATTTAACCTCGGGTTT",16,63.49,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A81S A105E G146V",3
"lib2","SARS-CoV-2","ATTTAACCTCTACGAA",4,17.33,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","N13P T85M P96M",3
"lib2","SARS-CoV-2","ATTTAACCTTCATGAT",12,12.81,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","Q176F",1
"lib2","SARS-CoV-2","ATTTAACGGAAATGTT",13,240.69,10.3,-0.54,0.03,2.96,1.05,0,">1 nonsynonymous","L60A K87W",2
"lib2","SARS-CoV-2","ATTTAACGTGACGGAT",1,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L D98C C158A V173H E186G",5
"lib2","SARS-CoV-2","ATTTAACGTTGAAATT",1,2.69,NA,NA,NA,NA,NA,NA,"stop","N24* V77* I138M",3
"lib2","SARS-CoV-2","ATTTAACTATCAAATA",8,110.21,10.82,-0.02,0.05,2.89,1.08,0,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","ATTTAACTATGTGCGC",1,6.14,10.66,-0.17,0.07,2.99,1.02,0,">1 nonsynonymous","S45A V173F",2
"lib2","SARS-CoV-2","ATTTAACTCTTCTCTT",5,43.04,6.02,-4.82,0.71,1.5,1.09,0,">1 nonsynonymous","C6D S19T L57C Y123P",4
"lib2","SARS-CoV-2","ATTTAACTGTGTAGAA",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I L95S",2
"lib2","SARS-CoV-2","ATTTAAGAAATAGTTC",3,29.51,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A42G Y91A A105L",3
"lib2","SARS-CoV-2","ATTTAAGAATTAACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129C R136K",2
"lib2","SARS-CoV-2","ATTTAAGAATTAAGGG",2,37.87,10.22,-0.62,0.06,2.89,1.02,0,">1 nonsynonymous","F62S L111N K128S",3
"lib2","SARS-CoV-2","ATTTAAGACCATAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113C N118G F126S N157Y Q176V",5
"lib2","SARS-CoV-2","ATTTAAGAGACTTTCG",3,10.08,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","Y93H",1
"lib2","SARS-CoV-2","ATTTAAGATTCGCTGT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","F17W N24W Y39* Q84H F99Y G146*",6
"lib2","SARS-CoV-2","ATTTAAGCAAAAACAA",14,128.74,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L5D T85H K94I V103M",4
"lib2","SARS-CoV-2","ATTTAAGGAGTAGCAG",2,10.37,10.83,0,0.11,2.89,1.13,0.01,"synonymous","",0
"lib2","SARS-CoV-2","ATTTAAGGGAATCTTC",3,17.6,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1M L131Q",2
"lib2","SARS-CoV-2","ATTTAAGTACACCCGC",5,1.47,NA,NA,NA,NA,NA,NA,"stop","A14* F17I",2
"lib2","SARS-CoV-2","ATTTAAGTCTAACTTG",3,18.45,6.26,-4.57,0.62,3,1.29,0.01,">1 nonsynonymous","V65R V77S",2
"lib2","SARS-CoV-2","ATTTAAGTGCAGCATA",8,199.07,10.69,-0.15,0.05,2.91,1.07,0,">1 nonsynonymous","T63A D90S",2
"lib2","SARS-CoV-2","ATTTAATAACCATGGA",1,61.03,9.57,-1.27,0.06,2.86,1.15,0,">1 nonsynonymous","T170N T201M",2
"lib2","SARS-CoV-2","ATTTAATAGAGGCTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","L60Q D98N V103G Q144* F167L P177S",6
"lib2","SARS-CoV-2","ATTTAATAGCCTCACG",5,31.29,10.45,-0.39,0.06,3,1,0,"1 nonsynonymous","F156R",1
"lib2","SARS-CoV-2","ATTTAATAGTGCTAAC",3,38.53,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","C6R Y39V G172N",3
"lib2","SARS-CoV-2","ATTTAATATGCCACTT",1,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G T140N A190M P197T",4
"lib2","SARS-CoV-2","ATTTAATCACTGCACT",4,23.44,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","F44C D90P",2
"lib2","SARS-CoV-2","ATTTAATCAGGAACAG",2,11.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R A18T P54S T63I P96C K128D",6
"lib2","SARS-CoV-2","ATTTAATCCAAAACTG",10,1.45,NA,NA,NA,NA,NA,NA,"stop","N157* Q176A",2
"lib2","SARS-CoV-2","ATTTAATCTTTATGTA",1,115.11,8.12,-2.71,0.14,1.88,1.08,0.01,">1 nonsynonymous","I2M N40T F126G N151S L187Y",5
"lib2","SARS-CoV-2","ATTTAATGACTCAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S19K G83S K198N",4
"lib2","SARS-CoV-2","ATTTAATGAGAAACAT",3,25.83,9.22,-1.62,0.09,2.89,1.07,0,">1 nonsynonymous","S53A D98E Y119Q",3
"lib2","SARS-CoV-2","ATTTAATGCAAACGAA",4,6.74,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8E T15V F99S V103A",4
"lib2","SARS-CoV-2","ATTTAATGTACCAAAG",9,55.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44C N107A R127F",3
"lib2","SARS-CoV-2","ATTTAATTATCATACG",9,78.13,8.93,-1.91,0.08,1.88,1.14,0,">1 nonsynonymous","A14L S45V V153I",3
"lib2","SARS-CoV-2","ATTTAATTATCGCTTT",3,95.46,9.7,-1.13,0.05,2.1,1.01,0,"1 nonsynonymous","F8Q",1
"lib2","SARS-CoV-2","ATTTAATTGAAGGTTT",2,19.72,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C49G Y66T G86I R127G G166T",5
"lib2","SARS-CoV-2","ATTTAATTGACTCATT",6,55.67,10.84,0.01,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTAATTGTTATGTG",12,158.5,10.89,0.05,0.05,2.93,1.08,0,">1 nonsynonymous","L60M K132L",2
"lib2","SARS-CoV-2","ATTTAATTTACGCGAT",6,7.28,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","F62N Y123S R136G",3
"lib2","SARS-CoV-2","ATTTACAAAAAAAAAT",2,37.9,10.88,0.05,0.07,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTACAAAAATTAAG",4,0.58,NA,NA,NA,NA,NA,NA,"stop","G9E D98L G101H P161*",4
"lib2","SARS-CoV-2","ATTTACAACAAAAGGC",6,163.22,10.82,-0.02,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTACAACGCCCACT",21,224.26,10.77,-0.06,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTACAAGAAGGGGT",13,457.09,10.43,-0.4,0.04,2.9,1.07,0,">1 nonsynonymous","N110E G152R V173N",3
"lib2","SARS-CoV-2","ATTTACAAGTTAAATG",4,98.62,10.01,-0.82,0.07,2.5,1.12,0,">1 nonsynonymous","D98E P161A",2
"lib2","SARS-CoV-2","ATTTACACACCATAAC",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H V103R F167G",3
"lib2","SARS-CoV-2","ATTTACACGACGAGTT",5,90.01,10.28,-0.56,0.03,2.92,1.03,0,">1 nonsynonymous","A42Y K87I T148S T201K",4
"lib2","SARS-CoV-2","ATTTACACTAATCGAA",9,23.62,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G86V D98A",2
"lib2","SARS-CoV-2","ATTTACAGTAAACTCC",26,121.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5S F12K Y50C",3
"lib2","SARS-CoV-2","ATTTACATATCATACG",1,31.11,6.29,-4.54,0.89,1.5,1.25,0.06,">1 nonsynonymous","L5P P96S Y123M Y178I",4
"lib2","SARS-CoV-2","ATTTACATCAAGAGAG",8,18.19,6.29,-4.55,0.52,1.91,1.1,0.02,">1 nonsynonymous","N13F K56Y F70L R136K",4
"lib2","SARS-CoV-2","ATTTACATTTAAAATT",6,48.67,9.85,-0.98,0.06,2.17,1.08,0,">1 nonsynonymous","I2N N40P E135Y",3
"lib2","SARS-CoV-2","ATTTACCAATATCAAC",7,0.85,NA,NA,NA,NA,NA,NA,"stop","I2A K198*",2
"lib2","SARS-CoV-2","ATTTACCAATGTCAAC",2,23.6,6,-4.84,2,3,1.3,0.02,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","ATTTACCAGAACCGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C49P S147W F156*",3
"lib2","SARS-CoV-2","ATTTACCCATCTCCTA",1,15.93,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","V32F F70P G83K S139I E154W",5
"lib2","SARS-CoV-2","ATTTACCCTCCATGGG",2,40.15,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y39G D75W K114P P161K",4
"lib2","SARS-CoV-2","ATTTACCGATGACTTT",2,107.14,10.81,-0.02,0.04,2.91,1.09,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","ATTTACCGCCAATTGG",1,35.46,8.3,-2.54,0.15,1.5,1.07,0.01,">1 nonsynonymous","P7K S53M D112L P149Q",4
"lib2","SARS-CoV-2","ATTTACCGGGACACGG",1,6.05,8.2,-2.64,0.38,1.5,1.06,0.06,">1 nonsynonymous","R16G R27C W106L S200N",4
"lib2","SARS-CoV-2","ATTTACCGTTATCCAG",9,129.77,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44M F134D P177T",3
"lib2","SARS-CoV-2","ATTTACCTCCCATTCA",3,24.24,8.59,-2.24,0.3,1.5,1.11,0.04,">1 nonsynonymous","T15S V65R S139Y K198G",4
"lib2","SARS-CoV-2","ATTTACCTTTCAACAG",13,387.66,10.27,-0.57,0.03,2.85,1.05,0,">1 nonsynonymous","S41P T55L D90R",3
"lib2","SARS-CoV-2","ATTTACGAGAAAACAT",15,38.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C49V A89L N118V P133Q E141G A190N",6
"lib2","SARS-CoV-2","ATTTACGCAACCGCCA",5,55.84,10.38,-0.46,0.05,2.84,1.01,0,">1 nonsynonymous","P133G S184Q",2
"lib2","SARS-CoV-2","ATTTACGCCCGACACA",2,19.44,9.85,-0.98,0.12,1.96,1.09,0.01,">1 nonsynonymous","V37D A89Y S147N",3
"lib2","SARS-CoV-2","ATTTACGCCTTTGAAA",3,41.2,6,-4.84,2,1.5,1.38,0.07,">1 nonsynonymous","C61L I88A F99E T140K G166Y",5
"lib2","SARS-CoV-2","ATTTACGCGGATTTCG",5,29.02,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","C61W S69W E141N N151I C158N",5
"lib2","SARS-CoV-2","ATTTACGCGGTTAAAT",1,6.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S D112N",2
"lib2","SARS-CoV-2","ATTTACGGCTTTTGTC",17,81.74,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I72E K94Y N107E T201S",4
"lib2","SARS-CoV-2","ATTTACGTACGATACC",2,12.09,10.74,-0.1,0.07,2.92,1.12,0,"1 nonsynonymous","N110Q",1
"lib2","SARS-CoV-2","ATTTACTAAATTCCCT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","Y66T T85* Q144F",3
"lib2","SARS-CoV-2","ATTTACTAACGTATAT",16,189.87,9.95,-0.89,0.05,2.54,1.03,0,">1 nonsynonymous","P7Y A14V",2
"lib2","SARS-CoV-2","ATTTACTACATAGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C31N A192M",3
"lib2","SARS-CoV-2","ATTTACTACGCGCTAC",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103K K132T S200Q",3
"lib2","SARS-CoV-2","ATTTACTAGTATACCT",10,168.3,10.81,-0.03,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTACTCCGTATCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","ATTTACTCTGCGCACG",6,27.45,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G51R F62N N107T K128L S184W",5
"lib2","SARS-CoV-2","ATTTACTTAAAGAAAT",1,9.4,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","F17L Y91L Y119P F167T",4
"lib2","SARS-CoV-2","ATTTACTTAGTATAAT",11,174.85,10.58,-0.26,0.02,2.91,1.07,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","ATTTACTTATATCCCC",2,17.82,6.86,-3.97,0.47,1.5,1.14,0.04,">1 nonsynonymous","N118I L162R Q168L",3
"lib2","SARS-CoV-2","ATTTACTTGAGCCGCC",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N Q79R",2
"lib2","SARS-CoV-2","ATTTACTTGTAATTCT",4,54.7,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N64V A81T Y119C S129F Q144H",5
"lib2","SARS-CoV-2","ATTTAGAACTAATGAG",7,139.8,10.13,-0.71,0.06,2.7,1.01,0,">1 nonsynonymous","S129L I138L S184A C195F",4
"lib2","SARS-CoV-2","ATTTAGAACTTAGTTA",4,64.99,8.49,-2.35,0.1,2.08,1.1,0,">1 nonsynonymous","P7K E135S N171G",3
"lib2","SARS-CoV-2","ATTTAGAATACCTCAA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","F12* P96C S108R F156L T201K",5
"lib2","SARS-CoV-2","ATTTAGACTAATCCGA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V T100Q F134D Y165A",4
"lib2","SARS-CoV-2","ATTTAGACTTATAACA",1,49.3,9.68,-1.16,0.16,2.73,1.15,0.01,">1 nonsynonymous","K87T Y119N",2
"lib2","SARS-CoV-2","ATTTAGAGCTGTCGAC",2,8.5,10.66,-0.17,0.14,2.59,1.4,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATTTAGATATCCACAT",13,192.7,10.74,-0.1,0.04,2.95,1.06,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","ATTTAGCACTAAAATG",4,56.75,6.07,-4.76,0.67,1.5,1.15,0.01,">1 nonsynonymous","E10A L162D",2
"lib2","SARS-CoV-2","ATTTAGCCTAAACGGT",17,88.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18T R73K F99T",3
"lib2","SARS-CoV-2","ATTTAGCCTCAAAGGT",1,45.37,9.97,-0.87,0.08,2.77,1,0,">1 nonsynonymous","E10Y G83H",2
"lib2","SARS-CoV-2","ATTTAGCGAGCGCTTA",8,199.99,10.74,-0.1,0.03,2.87,1.13,0,">1 nonsynonymous","A33F T100M",2
"lib2","SARS-CoV-2","ATTTAGGATGCTTATA",4,36.16,10.92,0.09,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTAGGCGACGGCGT",3,69.1,9.15,-1.69,0.1,1.5,1.07,0,"1 nonsynonymous","Y50K",1
"lib2","SARS-CoV-2","ATTTAGGGTGCATAGA",2,31.11,10.84,0,0.07,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTTAGGTGACGAAAT",12,3.75,NA,NA,NA,NA,NA,NA,"stop","S36W P96* F167L V181K",4
"lib2","SARS-CoV-2","ATTTAGTAAAGCCAGC",2,81.23,10.47,-0.37,0.06,2.82,1.1,0,">1 nonsynonymous","T3Q A33P T100Q",3
"lib2","SARS-CoV-2","ATTTAGTAACCCATTC",8,2.08,NA,NA,NA,NA,NA,NA,"stop","A105* E154F",2
"lib2","SARS-CoV-2","ATTTAGTAACTTAAAT",3,61.66,9.78,-1.06,0.05,2.41,1.03,0,">1 nonsynonymous","N4L G155L",2
"lib2","SARS-CoV-2","ATTTAGTATACAGGCA",13,6,NA,NA,NA,NA,NA,NA,"stop","C6M F99S K114C P149* V173S",5
"lib2","SARS-CoV-2","ATTTAGTCAACCAATG",9,53,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D34L N40S Q144R C150E",4
"lib2","SARS-CoV-2","ATTTAGTCCCCCAGAT",3,49,10.41,-0.43,0.11,2.34,1,0,">1 nonsynonymous","L5V R127S Q163Y",3
"lib2","SARS-CoV-2","ATTTAGTGTTAGTCAC",10,222.81,10.8,-0.03,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTAGTTAGAAAACA",15,3.55,NA,NA,NA,NA,NA,NA,"stop","F8* K128* F156D E186V K198D",5
"lib2","SARS-CoV-2","ATTTAGTTCAGAAACA",4,62.93,10.88,0.04,0.08,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTATAAAAAAGTCA",1,12.27,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N1C A33E P82Q T201E",4
"lib2","SARS-CoV-2","ATTTATAAAAATAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R R27V D90H K128F",4
"lib2","SARS-CoV-2","ATTTATAAACAGTTTT",6,190.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38F D59G E141T V153W Y159L G174D",6
"lib2","SARS-CoV-2","ATTTATAAACCTACCG",3,44.54,8.63,-2.21,0.16,1.5,1.06,0.01,">1 nonsynonymous","V65E N120V",2
"lib2","SARS-CoV-2","ATTTATAAATAAACTG",14,202.4,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F17A V32S L95K N107T H189N P191T",6
"lib2","SARS-CoV-2","ATTTATAACAATGAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F8* I88V",2
"lib2","SARS-CoV-2","ATTTATAACGGTATAG",4,1.02,NA,NA,NA,NA,NA,NA,"stop","A22Y F44T V103K E141*",4
"lib2","SARS-CoV-2","ATTTATAATGCCCAAA",6,141.27,10.88,0.05,0.07,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTATACAAACATCT",1,56.82,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D68R Y91V",2
"lib2","SARS-CoV-2","ATTTATACCACCGTGC",7,160.07,10.8,-0.04,0.04,2.91,1.06,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","ATTTATACCATCACCA",1,10.33,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V65W R127N",2
"lib2","SARS-CoV-2","ATTTATAGAACAAGAG",7,58.96,10.62,-0.21,0.03,2.93,1.07,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","ATTTATAGCATAACTA",10,69.53,10.82,-0.01,0.06,2.89,1.09,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","ATTTATAGCCTCAAAT",12,150.25,6,-4.84,1.96,1.5,1.2,0.01,">1 nonsynonymous","G86Y P96W K199M",3
"lib2","SARS-CoV-2","ATTTATAGCCTCGACT",1,29.57,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A42S L57S D90A Y119T S139G T201C",6
"lib2","SARS-CoV-2","ATTTATAGCTAATACC",6,49.24,6.96,-3.87,0.28,1.5,1.2,0.02,">1 nonsynonymous","C61Y G146M Q168V",3
"lib2","SARS-CoV-2","ATTTATAGGCGCTACT",7,89.65,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C102M Q176L F185S",3
"lib2","SARS-CoV-2","ATTTATATACGGTAAT",5,0.13,NA,NA,NA,NA,NA,NA,"stop","S29I N40Y N120I L188*",4
"lib2","SARS-CoV-2","ATTTATATGATAAGTT",12,100.48,9.78,-1.06,0.06,2.27,1.05,0,">1 nonsynonymous","N4S S19M T63S K128H",4
"lib2","SARS-CoV-2","ATTTATATGCACATTG",12,233.36,10.73,-0.1,0.02,2.98,1.04,0,"1 nonsynonymous","L60N",1
"lib2","SARS-CoV-2","ATTTATATTATGAATC",16,226.05,10.26,-0.57,0.03,2.77,1.05,0,">1 nonsynonymous","E10V S36G P54Q",3
"lib2","SARS-CoV-2","ATTTATCAATTGAGAA",1,38.17,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S36N T55Y Y93S",3
"lib2","SARS-CoV-2","ATTTATCAGGAACGAG",6,33.16,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N24R L57Y S108R K114R Y175S",5
"lib2","SARS-CoV-2","ATTTATCATGGGTTGG",2,0.92,NA,NA,NA,NA,NA,NA,"stop","L5F V37* T148L K198*",4
"lib2","SARS-CoV-2","ATTTATCCCGTCAGAC",10,84.04,9,-1.83,0.13,1.56,1.16,0.01,">1 nonsynonymous","D90R F99H",2
"lib2","SARS-CoV-2","ATTTATCGAAGCACTA",3,15.4,10.83,-0.01,0.13,2.71,1.32,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATTTATCGATGCAGAC",5,26.19,6,-4.84,0.75,3,1.04,0,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","ATTTATCGCGTTCGGT",5,29.48,6,-4.84,2,3,1.14,0.03,">1 nonsynonymous","S41L G86F S129F Y159C",4
"lib2","SARS-CoV-2","ATTTATCGGCGACCCG",6,50.17,10.82,-0.01,0.04,2.95,1.05,0,"1 nonsynonymous","N40M",1
"lib2","SARS-CoV-2","ATTTATCTAGCGGTAC",5,42,8.17,-2.66,0.16,1.71,1.2,0.01,">1 nonsynonymous","T15R N118I F160Q A190L",4
"lib2","SARS-CoV-2","ATTTATCTGCGTTTTG",7,115.5,10.78,-0.05,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTATGAAGACGAAA",1,82,9.47,-1.37,0.1,1.78,1.08,0,">1 nonsynonymous","E10G G51L",2
"lib2","SARS-CoV-2","ATTTATGAAGTGGTCC",1,56.75,10.81,-0.03,0.07,2.94,1.06,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","ATTTATGAGAACGAGA",3,1.34,NA,NA,NA,NA,NA,NA,"stop","L95* V103G",2
"lib2","SARS-CoV-2","ATTTATGAGTTAGATT",19,184.76,10.33,-0.5,0.03,2.91,1.04,0,"1 nonsynonymous","E135C",1
"lib2","SARS-CoV-2","ATTTATGATCAAACGG",3,8.88,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","C6L I88T T100E",3
"lib2","SARS-CoV-2","ATTTATGCAAAAGGTT",8,195.55,10.76,-0.07,0.05,2.93,1.08,0,">1 nonsynonymous","F44L D59N P197L",3
"lib2","SARS-CoV-2","ATTTATGCAGATCGCG",8,99.26,8.47,-2.37,0.1,2.47,1.11,0,">1 nonsynonymous","K56I E141I F156G N171S K199M",5
"lib2","SARS-CoV-2","ATTTATGCAGTATACG",4,39.27,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","I28S F62H D97F K128A",4
"lib2","SARS-CoV-2","ATTTATGGGAACCCAA",1,4.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","ATTTATGTAATAGACG",1,0.09,NA,NA,NA,NA,NA,NA,"stop","V20L K128* F167E",3
"lib2","SARS-CoV-2","ATTTATGTATTTAAGT",13,85.87,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","C6F V65R I80N",3
"lib2","SARS-CoV-2","ATTTATGTCGTGCCGT",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G P54Q C61D V103W P197S",5
"lib2","SARS-CoV-2","ATTTATTAATTCAACA",1,10.84,10.57,-0.27,0.14,2.81,1.23,0.01,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","ATTTATTACAGTAAAG",9,37.6,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","N109P A145T V182E",3
"lib2","SARS-CoV-2","ATTTATTAGCTCTATA",13,153.69,10.8,-0.04,0.02,2.95,1.04,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","ATTTATTATTGACTAA",8,107.54,8.74,-2.09,0.13,1.5,1.08,0.01,">1 nonsynonymous","F17R Y35R D98N",3
"lib2","SARS-CoV-2","ATTTATTCGATCATAA",6,28,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N1I A18Y V103R E141G S200T",5
"lib2","SARS-CoV-2","ATTTATTCTAAGTAGC",3,16.72,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5V C31S F47R V103K K128R",5
"lib2","SARS-CoV-2","ATTTATTCTAGCTAAC",3,43.03,10.71,-0.12,0.02,2.95,1.06,0,"1 nonsynonymous","A18G",1
"lib2","SARS-CoV-2","ATTTATTGAAGCGGAA",2,83.73,10.72,-0.11,0.05,2.9,1.04,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","ATTTATTTACTATGAT",14,159.49,9.98,-0.85,0.04,2.96,1.05,0,">1 nonsynonymous","K87S L122Y P149I",3
"lib2","SARS-CoV-2","ATTTATTTAGCACGAT",6,27.56,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G101D P133S",2
"lib2","SARS-CoV-2","ATTTCAAACAGAACCC",4,0.48,NA,NA,NA,NA,NA,NA,"stop","G9* D98L R124D Y143C",4
"lib2","SARS-CoV-2","ATTTCAAAGAGTAGGG",7,24.45,6.01,-4.82,1.61,1.5,1.24,0.03,">1 nonsynonymous","A145I E154G V182F",3
"lib2","SARS-CoV-2","ATTTCAAATTGCAACA",9,102.06,9.45,-1.38,0.1,1.87,1.09,0,">1 nonsynonymous","A67V W106E",2
"lib2","SARS-CoV-2","ATTTCAACAACACGCG",2,5.56,6,-4.84,2,1.5,1.39,0.07,">1 nonsynonymous","V52I N58Y Y119E P133L",4
"lib2","SARS-CoV-2","ATTTCAACCAATGGAG",3,66.45,10.96,0.12,0.06,2.98,1.04,0,">1 nonsynonymous","P7D E141V K198M",3
"lib2","SARS-CoV-2","ATTTCAACCTTGATTG",2,5.03,10.91,0.08,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTCAAGCTAATTCT",1,24.91,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14V V37N G74P L125S S139G",5
"lib2","SARS-CoV-2","ATTTCAAGCTGACAGC",3,128.1,10.12,-0.71,0.07,2.59,1.03,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","ATTTCAATAAATCTGC",8,94.88,6,-4.84,2,1.6,1.27,0.02,">1 nonsynonymous","G86N Q144L Y159C",3
"lib2","SARS-CoV-2","ATTTCAATATGACCAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N1* G9H N30R L38Q D68L Y91M A145M E154S",8
"lib2","SARS-CoV-2","ATTTCAATCGCCGGAT",2,24.4,10.89,0.06,0.08,2.81,1.22,0,"1 nonsynonymous","S53D",1
"lib2","SARS-CoV-2","ATTTCAATTGTTGAAG",3,50.7,8.29,-2.54,0.26,1.5,1.1,0.03,">1 nonsynonymous","V37I A42V K48N T55D D112V Q144N",6
"lib2","SARS-CoV-2","ATTTCACAAAGATTAA",11,86.16,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","ATTTCACAAGGACGAG",1,21.68,10.74,-0.09,0.06,2.93,1.1,0,"1 nonsynonymous","A67C",1
"lib2","SARS-CoV-2","ATTTCACAAGGTTTGG",4,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T P96C L162S",3
"lib2","SARS-CoV-2","ATTTCACAGGTGATTT",7,102.33,10.74,-0.09,0.04,2.91,1.09,0,">1 nonsynonymous","P149M T201S",2
"lib2","SARS-CoV-2","ATTTCACCTCCTCGTC",4,59.3,10.26,-0.57,0.06,2.71,1.08,0,">1 nonsynonymous","P54C D97G E154S",3
"lib2","SARS-CoV-2","ATTTCACTTGTTGCAG",1,37.72,10.72,-0.11,0.07,2.9,1.06,0,">1 nonsynonymous","I104L K128M",2
"lib2","SARS-CoV-2","ATTTCAGACACTAGAG",9,128.17,10.23,-0.6,0.09,2.46,1.06,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","ATTTCAGAGTACATTG",3,50.37,6,-4.84,1.13,2.42,1.07,0,">1 nonsynonymous","R16L F62R G86T R127M D137R N171R L188P",7
"lib2","SARS-CoV-2","ATTTCAGCCCGACACA",14,138.34,10.76,-0.08,0.05,2.92,1.09,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","ATTTCAGCGTGAACGT",7,0.51,NA,NA,NA,NA,NA,NA,"stop","R27* Y35S C61L Q144* F156N",5
"lib2","SARS-CoV-2","ATTTCAGGCTCAGCAA",7,116.49,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D68S K94Q Y123Q P177L",4
"lib2","SARS-CoV-2","ATTTCAGTAGTAGAAC",2,15.46,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","R16L K48D C102P",3
"lib2","SARS-CoV-2","ATTTCAGTTCTGATGG",3,45.71,10.16,-0.67,0.04,2.83,1.09,0,">1 nonsynonymous","S43F N58L V173N",3
"lib2","SARS-CoV-2","ATTTCATAGGTTAGTA",10,78.18,10.66,-0.17,0.06,2.9,1.12,0,">1 nonsynonymous","F12V I28M",2
"lib2","SARS-CoV-2","ATTTCATCAAAATTAG",1,24.1,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44L I88W",2
"lib2","SARS-CoV-2","ATTTCATGAACGACTC",19,393.36,10.71,-0.12,0.04,2.95,1.07,0,">1 nonsynonymous","Y39K T55R",2
"lib2","SARS-CoV-2","ATTTCATGACAGTAAG",2,11.03,6,-4.84,2,3,1.23,0.03,">1 nonsynonymous","I28E G101T",2
"lib2","SARS-CoV-2","ATTTCATGACTAGATC",6,2.28,NA,NA,NA,NA,NA,NA,"stop","N13L F44N N110L G117L K198*",5
"lib2","SARS-CoV-2","ATTTCCAACCATGCGA",7,164.53,10.72,-0.11,0.04,2.91,1.11,0,">1 nonsynonymous","L5H Q84E",2
"lib2","SARS-CoV-2","ATTTCCAACTTACGGC",1,8.46,9.95,-0.88,0.22,1.92,1.14,0.02,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","ATTTCCAATCTTAATC",5,70.45,10.68,-0.16,0.07,2.94,1.09,0,"1 nonsynonymous","N110Y",1
"lib2","SARS-CoV-2","ATTTCCAATGACCGAG",1,4.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","ATTTCCACAACATTGG",4,114.83,10.54,-0.29,0.05,2.9,1.1,0,"1 nonsynonymous","P169S",1
"lib2","SARS-CoV-2","ATTTCCACCCTAATCG",1,10.59,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F99M Y143S",2
"lib2","SARS-CoV-2","ATTTCCATGATCCGTA",3,29.68,6,-4.84,2,3,1.27,0,">1 nonsynonymous","S43V F62G R179L",3
"lib2","SARS-CoV-2","ATTTCCATTCAGATGC",8,4.49,NA,NA,NA,NA,NA,NA,"stop","R27A S36* I88N G155Y F160P",5
"lib2","SARS-CoV-2","ATTTCCATTCGTAGGT",1,32.27,9.37,-1.46,0.09,1.82,1.11,0,">1 nonsynonymous","S19E V153Y",2
"lib2","SARS-CoV-2","ATTTCCCAAACTAGGC",4,30.78,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","W23V N40L V77L Y119A N130T",5
"lib2","SARS-CoV-2","ATTTCCCAGGAAGGAC",3,30.21,8.75,-2.09,0.24,1.71,1.13,0.02,">1 nonsynonymous","R25S C61D D97V V173H",4
"lib2","SARS-CoV-2","ATTTCCCCGCATCAAA",7,271.06,10.6,-0.24,0.04,2.92,1.03,0,">1 nonsynonymous","A33T V194G",2
"lib2","SARS-CoV-2","ATTTCCCGAAAATAAA",6,31.11,6.7,-4.14,0.58,1.5,1.24,0.03,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ATTTCCCGCCCTATCG",11,366.49,10.28,-0.55,0.02,2.96,1.05,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","ATTTCCCGTCTCTGTT",6,104.87,10.38,-0.45,0.02,2.92,1.07,0,">1 nonsynonymous","K26T L131M P149H",3
"lib2","SARS-CoV-2","ATTTCCCTCATTCCCT",5,24.04,8.57,-2.27,0.2,1.69,1.13,0.01,">1 nonsynonymous","P96R S139A",2
"lib2","SARS-CoV-2","ATTTCCCTTAATATCG",1,33.73,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25G L95C S147Y",3
"lib2","SARS-CoV-2","ATTTCCCTTGACCTAA",9,25.55,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S53C C61F I88T Y159S",4
"lib2","SARS-CoV-2","ATTTCCGCAACGACTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S K94F K128V F134S",4
"lib2","SARS-CoV-2","ATTTCCGCAGGCTCCA",7,103.95,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V20W G146S",2
"lib2","SARS-CoV-2","ATTTCCGGGATTGTTG",1,0.58,NA,NA,NA,NA,NA,NA,"stop","V11W V37Y I88L G101Y Y119*",5
"lib2","SARS-CoV-2","ATTTCCTAAACGAACT",6,67.04,10.03,-0.8,0.08,2.57,1,0,">1 nonsynonymous","S19E S164P",2
"lib2","SARS-CoV-2","ATTTCCTAAATCAATA",9,129.03,9.9,-0.94,0.05,2.91,1.07,0,"1 nonsynonymous","F156N",1
"lib2","SARS-CoV-2","ATTTCCTAACAAGCAT",10,120.83,9.44,-1.4,0.04,1.94,1.05,0,">1 nonsynonymous","S129C V182T S200E",3
"lib2","SARS-CoV-2","ATTTCCTCAATTGGTG",2,24,9.08,-1.75,0.17,1.5,1.04,0.01,">1 nonsynonymous","N4K W106V F134Q T140E",4
"lib2","SARS-CoV-2","ATTTCCTCGATAAAAA",3,30.45,7.7,-3.13,0.28,1.5,1.08,0.05,">1 nonsynonymous","W23H D90Y T148S",3
"lib2","SARS-CoV-2","ATTTCCTTAGGATAAA",1,10.81,9.11,-1.73,0.09,2.87,1.17,0,">1 nonsynonymous","V77L G83M T170R",3
"lib2","SARS-CoV-2","ATTTCCTTCCACTACT",11,269.61,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59I R73L P177R",3
"lib2","SARS-CoV-2","ATTTCGAAATGACTGT",6,62.78,10.34,-0.5,0.06,2.94,1.11,0,">1 nonsynonymous","I2D L60T V115D",3
"lib2","SARS-CoV-2","ATTTCGAACCATTAAA",7,29.81,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","L57N A81I K94F W106K R127S",5
"lib2","SARS-CoV-2","ATTTCGACCTGACAGG",1,19.34,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N30R N130V P161A R179S",4
"lib2","SARS-CoV-2","ATTTCGACGACTTCAT",15,31.25,7.95,-2.89,0.38,1.5,1.05,0.06,">1 nonsynonymous","T15N K26S K48P K94W P149L P161Q T170R G174I",8
"lib2","SARS-CoV-2","ATTTCGCAACGTATGG",4,24.8,10.82,-0.01,0.08,2.93,1.08,0,"1 nonsynonymous","F62P",1
"lib2","SARS-CoV-2","ATTTCGCCCGAAGGGC",4,137.12,10.1,-0.74,0.03,2.85,1.01,0,">1 nonsynonymous","F44S H189C",2
"lib2","SARS-CoV-2","ATTTCGCCCGACTGTA",8,199.65,8.08,-2.75,0.12,1.78,1.07,0.01,">1 nonsynonymous","D112S T201S",2
"lib2","SARS-CoV-2","ATTTCGCCTTCCAGGT",1,79.48,10.31,-0.52,0.04,2.96,1.06,0,">1 nonsynonymous","N64E G174R",2
"lib2","SARS-CoV-2","ATTTCGCGAAACCTAG",2,1.47,NA,NA,NA,NA,NA,NA,"stop","L5* V182W",2
"lib2","SARS-CoV-2","ATTTCGGCGGCTGCAA",2,31.3,10.79,-0.04,0.05,3,1,0,">1 nonsynonymous","T100A P197Q",2
"lib2","SARS-CoV-2","ATTTCGGGTGTCCGCA",1,13,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F17S G74T D97Y",3
"lib2","SARS-CoV-2","ATTTCGGTAAAATATG",1,42.05,10.74,-0.09,0.03,3,1.01,0,">1 nonsynonymous","Y39Q G196W",2
"lib2","SARS-CoV-2","ATTTCGGTCGACCTTG",11,121.8,8.5,-2.33,0.09,2.92,1.04,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","ATTTCGGTCTCTGACC",12,40.99,6,-4.84,1.8,1.5,1.14,0.01,">1 nonsynonymous","K94G W106S",2
"lib2","SARS-CoV-2","ATTTCGGTTTAAGGCT",2,53.35,8.63,-2.21,0.07,2.7,1.05,0,">1 nonsynonymous","C6F F62T E154F",3
"lib2","SARS-CoV-2","ATTTCGTATTTTAGCT",3,53.16,10.37,-0.46,0.05,2.94,1.05,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","ATTTCTAAATGCGGAA",5,56.7,10.81,-0.02,0.03,3,1.02,0,"1 nonsynonymous","E141D",1
"lib2","SARS-CoV-2","ATTTCTAATAACTCCA",2,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N D90Y A105Y",3
"lib2","SARS-CoV-2","ATTTCTACAAAGCCAA",8,35.14,6.28,-4.55,0.75,1.5,1.17,0.02,">1 nonsynonymous","A14T Y21R P96R V103S G116S A145I S184N",7
"lib2","SARS-CoV-2","ATTTCTAGGGGTTAAT",1,101.43,10.3,-0.53,0.07,2.72,1.06,0,">1 nonsynonymous","N64R P96G",2
"lib2","SARS-CoV-2","ATTTCTATACCCTACC",3,106.65,10.88,0.04,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTCTCAGAACTTCT",8,64.42,8.82,-2.01,0.16,1.66,1.09,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","ATTTCTCAGCCTGTCA",7,57.84,6,-4.84,1.42,1.5,1.14,0.01,">1 nonsynonymous","R16G G51Y Y93P L122K",4
"lib2","SARS-CoV-2","ATTTCTCATCTGTTTT",4,19.6,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C49K Y178F",2
"lib2","SARS-CoV-2","ATTTCTCCTCTCCCCC",17,54.87,6.4,-4.44,0.73,1.5,1.2,0.04,">1 nonsynonymous","V103P L125Q",2
"lib2","SARS-CoV-2","ATTTCTCGAATCAATG",5,91.79,11.11,0.28,0.05,2.93,1.08,0,"1 nonsynonymous","Y123F",1
"lib2","SARS-CoV-2","ATTTCTCGATGGTCAT",7,85.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A33K V77S L162S",3
"lib2","SARS-CoV-2","ATTTCTCGCCTTGTTT",3,60.74,10.35,-0.49,0.04,2.9,1.08,0,">1 nonsynonymous","A14K S129I",2
"lib2","SARS-CoV-2","ATTTCTCGGGTTAGTA",24,105.13,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L95V L122A P169L R179T",4
"lib2","SARS-CoV-2","ATTTCTCGTTACATCA",7,99.73,9.91,-0.93,0.06,2.28,1.05,0,">1 nonsynonymous","P96K N151Q",2
"lib2","SARS-CoV-2","ATTTCTCTCAATAATG",10,2.51,NA,NA,NA,NA,NA,NA,"stop","Y35E P54T I80H K87* V115D",5
"lib2","SARS-CoV-2","ATTTCTCTTGCGTGGG",13,84.3,10.38,-0.45,0.02,2.92,1.04,0,">1 nonsynonymous","S45A D97F",2
"lib2","SARS-CoV-2","ATTTCTCTTTAACTTA",7,153.09,10.85,0.01,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTCTGAAACTATTG",9,30.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K94W K132W S164L V194I",4
"lib2","SARS-CoV-2","ATTTCTGAAAGTATAT",3,81.71,10.82,-0.02,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTCTGAATGGGTAA",1,25.8,9.47,-1.37,0.08,2.88,1.13,0,">1 nonsynonymous","R16M L125H V153G",3
"lib2","SARS-CoV-2","ATTTCTGATTTTTTTT",5,123.95,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K87S Y119S Y143G N151Y L162F",5
"lib2","SARS-CoV-2","ATTTCTGCAATGCGAT",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N F156I V173P",3
"lib2","SARS-CoV-2","ATTTCTGCGCGAGGAG",6,31.41,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5R V37W T55P K94P",4
"lib2","SARS-CoV-2","ATTTCTGGCTCGCAAC",1,6.8,10.64,-0.2,0.09,2.79,1.24,0,">1 nonsynonymous","V37T Y121L",2
"lib2","SARS-CoV-2","ATTTCTGTTGGCCAAT",6,143.54,10.4,-0.44,0.04,2.87,1.12,0,">1 nonsynonymous","V32Q C61L N130D",3
"lib2","SARS-CoV-2","ATTTCTTACAACTAAC",1,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T C49Y I88F",3
"lib2","SARS-CoV-2","ATTTCTTAGACATCCT",12,398.52,8.89,-1.95,0.06,2.76,1.08,0,">1 nonsynonymous","E154C P169C",2
"lib2","SARS-CoV-2","ATTTCTTCATCCCCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1L P7E G74E Y91* E141P Y178D",6
"lib2","SARS-CoV-2","ATTTCTTCCTAATTTA",3,51.13,10.03,-0.81,0.09,2.14,1.01,0,">1 nonsynonymous","V20C V180I",2
"lib2","SARS-CoV-2","ATTTCTTCGCTGACAC",5,33.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D90L W106G R136S C158K",4
"lib2","SARS-CoV-2","ATTTCTTGAGGCTGCC",5,103.69,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L60Q D75G A105S R179I",4
"lib2","SARS-CoV-2","ATTTCTTGCAGAATGT",1,3.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95T",1
"lib2","SARS-CoV-2","ATTTCTTGGAAGCGAG",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M K56L",2
"lib2","SARS-CoV-2","ATTTGAAAAAAATTTA",2,10.32,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","Y93V T100A",2
"lib2","SARS-CoV-2","ATTTGAAAACGATCTA",5,48.11,10.85,0.01,0.06,2.82,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGAAAAGACTGTT",2,101.84,10.1,-0.74,0.03,2.62,1.06,0,">1 nonsynonymous","K56N L57R T100S V173L",4
"lib2","SARS-CoV-2","ATTTGAAACAAGCGAT",1,11.6,6,-4.84,2,1.5,1.06,0.06,">1 nonsynonymous","V37R D59R Y121N L131S",4
"lib2","SARS-CoV-2","ATTTGAAAGTTTGGCA",3,54.58,9.64,-1.2,0.09,2.07,1.05,0,">1 nonsynonymous","L38P T148V",2
"lib2","SARS-CoV-2","ATTTGAAATGAGCCAT",5,3.14,NA,NA,NA,NA,NA,NA,"stop","S45L T55* N151S",3
"lib2","SARS-CoV-2","ATTTGAACAATTCGGA",10,129.57,10.13,-0.7,0.02,2.91,1.02,0,">1 nonsynonymous","G9R C61G K94R L125M",4
"lib2","SARS-CoV-2","ATTTGAACTGCACGAA",4,112.22,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T63I F70P G83F C150S Y178W",5
"lib2","SARS-CoV-2","ATTTGAAGAATAAACT",1,29.22,8.44,-2.4,0.15,2.75,1.04,0.01,">1 nonsynonymous","C61G Y175S",2
"lib2","SARS-CoV-2","ATTTGAATAAACAACT",1,7.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103A G117S",2
"lib2","SARS-CoV-2","ATTTGAATAAACTACT",3,16.36,8.3,-2.54,0.18,2.32,1.17,0.01,">1 nonsynonymous","G9L D98L G166V",3
"lib2","SARS-CoV-2","ATTTGAATATATGCGG",2,8.87,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","G83S A105R N157S",3
"lib2","SARS-CoV-2","ATTTGAATCTGGCTGA",14,149.58,7.02,-3.81,0.38,1.5,1.16,0.03,">1 nonsynonymous","K56E R127P",2
"lib2","SARS-CoV-2","ATTTGAATGTAATGGA",1,18.87,10.16,-0.67,0.09,3,1,0,">1 nonsynonymous","E154L T201P",2
"lib2","SARS-CoV-2","ATTTGAATTCAGCCAT",9,94.44,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T85W P177T",2
"lib2","SARS-CoV-2","ATTTGACAACAGCGCA",2,0.49,NA,NA,NA,NA,NA,NA,"stop","G9R A33R Y35* S43Q I104P G117I",6
"lib2","SARS-CoV-2","ATTTGACAAGATGAGC",1,37.36,10.6,-0.24,0.09,2.94,1.1,0,">1 nonsynonymous","A42P K48S",2
"lib2","SARS-CoV-2","ATTTGACAATTTGATA",19,238.7,10.65,-0.19,0.02,2.92,1.06,0,">1 nonsynonymous","N1K L5S Y21H P54R",4
"lib2","SARS-CoV-2","ATTTGACACAACCCGT",14,23.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2T D34V I80L S139H S184M",5
"lib2","SARS-CoV-2","ATTTGACACACTCAAG",12,55.26,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2T T63C Y93L Y121W",4
"lib2","SARS-CoV-2","ATTTGACAGCTATGAT",2,7.72,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N64S G83P N107R S139I C158E",5
"lib2","SARS-CoV-2","ATTTGACAGTAGTGAT",18,487.07,9.82,-1.02,0.03,2.82,1.06,0,">1 nonsynonymous","E154P Y178I",2
"lib2","SARS-CoV-2","ATTTGACATGAAAAGA",1,12.4,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N13P T55N G117V",3
"lib2","SARS-CoV-2","ATTTGACCATATTCTT",24,82.53,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F62T G86M F99C D112L",4
"lib2","SARS-CoV-2","ATTTGACCTCAAAAAG",1,19.06,6.12,-4.72,0.98,1.5,1.22,0.02,">1 nonsynonymous","E10Y A33P Y91T",3
"lib2","SARS-CoV-2","ATTTGACCTTAAAATA",8,107.33,10.85,0.01,0.04,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTTGACTATCCAAGT",3,22.99,10.81,-0.03,0.09,2.95,1.09,0,">1 nonsynonymous","I28F T148N",2
"lib2","SARS-CoV-2","ATTTGACTCCCCATTG",8,96.25,10.57,-0.26,0.07,2.82,1.07,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","ATTTGACTCCTAAGGC",16,67.23,6.46,-4.37,0.58,1.5,1.26,0.03,">1 nonsynonymous","C6P F70M",2
"lib2","SARS-CoV-2","ATTTGACTTGCCTGGG",1,19.09,10.87,0.04,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGAGAACAGCGAG",1,5.58,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","F17R S45P V103I G117S I142L Y159V",6
"lib2","SARS-CoV-2","ATTTGAGAAGAATCGG",1,5.07,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","L5I T15R N30L L38R V65T R136L S147R V181G",8
"lib2","SARS-CoV-2","ATTTGAGCATTAGGTC",5,89.51,10.05,-0.79,0.09,2.38,1.08,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","ATTTGAGGAGTTCTTT",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D P96Q A105V K128E",4
"lib2","SARS-CoV-2","ATTTGAGGGCTTTCGT",2,70.52,10.79,-0.05,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGAGGGTAAGCCA",1,10.21,6.16,-4.67,0.83,3,1.19,0.01,">1 nonsynonymous","F47S T55V A105M K114R T201G",5
"lib2","SARS-CoV-2","ATTTGAGTCCTCTGAG",13,203.15,10.48,-0.36,0.04,2.86,1.03,0,">1 nonsynonymous","A14T I138L",2
"lib2","SARS-CoV-2","ATTTGAGTCGCAGACG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4V K56T I88T N118T N130T C158* T201R",7
"lib2","SARS-CoV-2","ATTTGAGTGACTCAAC",1,10.18,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T3Y V32T L38G Y121G",4
"lib2","SARS-CoV-2","ATTTGATAAACTCGTA",10,103.27,10.89,0.05,0.07,2.89,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGATATGCTTGCA",6,116.51,9.99,-0.85,0.07,2.71,1.03,0,">1 nonsynonymous","G9S S19Q",2
"lib2","SARS-CoV-2","ATTTGATGAAAACCTA",6,26.53,7.89,-2.94,0.34,1.5,1.07,0.05,">1 nonsynonymous","L95A S139T S200R",3
"lib2","SARS-CoV-2","ATTTGATGATCCACTC",9,123.13,7.63,-3.21,0.26,1.5,1.16,0.02,">1 nonsynonymous","D68V A190L",2
"lib2","SARS-CoV-2","ATTTGATTTTCCAAAT",8,138.5,8.73,-2.1,0.07,2.85,1.07,0,">1 nonsynonymous","Y91M A145K",2
"lib2","SARS-CoV-2","ATTTGCAACTAAATCA",5,20.67,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D68R A89L N118L V181W",4
"lib2","SARS-CoV-2","ATTTGCACAAAGATTT",7,72.41,9.66,-1.17,0.07,1.9,1.11,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","ATTTGCACACGCAGAG",4,36.12,8.04,-2.8,0.26,1.5,1.17,0.02,">1 nonsynonymous","A14R A33L A81T D98I",4
"lib2","SARS-CoV-2","ATTTGCAGCAGTGGGT",3,36.77,10.76,-0.08,0.06,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTTGCAGCCAACACT",1,3.26,NA,NA,NA,NA,NA,NA,"stop","S36R S129L T140K A145M A192*",5
"lib2","SARS-CoV-2","ATTTGCATAAACCCAA",4,106.1,10.61,-0.23,0.04,2.98,1.04,0,">1 nonsynonymous","L5R D59S I72L T148M",4
"lib2","SARS-CoV-2","ATTTGCATAAATGCTA",9,43.85,6.56,-4.27,0.43,1.5,1.04,0.03,">1 nonsynonymous","S29Q A67R V77Q A89T Y175V",5
"lib2","SARS-CoV-2","ATTTGCCAAGACTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib2","SARS-CoV-2","ATTTGCCAATCTTTTC",6,115.49,10.05,-0.78,0.03,2.84,1,0,">1 nonsynonymous","T3W V11Y",2
"lib2","SARS-CoV-2","ATTTGCCATTACAGAC",7,103.47,10.78,-0.06,0.03,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGCCCACATGCCT",3,27.88,10.53,-0.3,0.07,2.99,1.05,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","ATTTGCCTAAAGTCAC",4,711.23,10.81,-0.02,0.04,2.97,1.05,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","ATTTGCCTACATTAAG",4,43.51,10.85,0.02,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGCCTCGGTCGTA",7,98.04,10.85,0.01,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGCGAATCACAAG",3,37.77,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9L A33H C61V N107F N120V E141Y T201A",7
"lib2","SARS-CoV-2","ATTTGCGAGGAAGAAA",17,274.4,10.78,-0.06,0.04,2.95,1.07,0,">1 nonsynonymous","P54L K114H T201W",3
"lib2","SARS-CoV-2","ATTTGCGTAAAAATAA",2,10.9,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D59A D112V C158T",3
"lib2","SARS-CoV-2","ATTTGCGTTACCTATA",3,49.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D97Y I142L C150G N157C",4
"lib2","SARS-CoV-2","ATTTGCTAGACCTGGA",8,108.73,9.49,-1.34,0.14,1.63,1.17,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","ATTTGCTCAAGCCACA",6,5.41,NA,NA,NA,NA,NA,NA,"stop","V65* D98M",2
"lib2","SARS-CoV-2","ATTTGCTGACCCTGTG",1,7.42,10.7,-0.13,0.06,2.92,1.09,0,">1 nonsynonymous","A42R F134L",2
"lib2","SARS-CoV-2","ATTTGCTGACTTAAAT",2,11.03,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","R25S C49K Q84L Q144T S184C",5
"lib2","SARS-CoV-2","ATTTGCTTTTATACAA",3,12.3,6,-4.84,2,1.5,1.21,0.08,">1 nonsynonymous","L5Q T63W A81L P149L F156K V173G",6
"lib2","SARS-CoV-2","ATTTGGAAAACGTTTT",5,61.35,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G83Y Q144V L162E",3
"lib2","SARS-CoV-2","ATTTGGACTGATATAA",8,50.86,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F44V P82N F99R",3
"lib2","SARS-CoV-2","ATTTGGCAAGTATGAC",2,42.44,6,-4.84,0.84,3,1.08,0,">1 nonsynonymous","N24M Y35E Q176S",3
"lib2","SARS-CoV-2","ATTTGGCACTGACGGG",16,366.09,10.29,-0.54,0.03,2.95,1.07,0,">1 nonsynonymous","G174L T201R",2
"lib2","SARS-CoV-2","ATTTGGCCTCGTAACG",9,169.19,9.94,-0.89,0.05,2.5,1.04,0,">1 nonsynonymous","A81E F134C",2
"lib2","SARS-CoV-2","ATTTGGCGTATGGGCC",6,117.23,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N4V K94V P177C",3
"lib2","SARS-CoV-2","ATTTGGGCCCATGTTA",1,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S S53L S113L",3
"lib2","SARS-CoV-2","ATTTGGGCCTAAGTCC",12,50.29,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9I T100N R136C V153K N157P",5
"lib2","SARS-CoV-2","ATTTGGGGCGATCTGA",3,54.13,10.87,0.04,0.06,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTGGGGGCAAAAGT",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L T55I R73L D90L T100K",5
"lib2","SARS-CoV-2","ATTTGGTATTGAAGAA",2,49.76,10.83,-0.01,0.06,2.91,1.09,0,"1 nonsynonymous","I2Q",1
"lib2","SARS-CoV-2","ATTTGGTCGCGACATA",2,43.67,8.5,-2.33,0.17,2.14,1.13,0.01,">1 nonsynonymous","S43F Y121L Q176S S200M",4
"lib2","SARS-CoV-2","ATTTGGTTAAAATATC",9,139.95,10.68,-0.16,0.06,2.88,1.13,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","ATTTGGTTAACCATTA",3,34.32,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","Y35T F47S R73I I104N",4
"lib2","SARS-CoV-2","ATTTGTAAAAAGTACT",3,36.88,9.86,-0.98,0.23,1.51,1,0.02,"1 nonsynonymous","D137T",1
"lib2","SARS-CoV-2","ATTTGTAAGAACCAAG",9,138.98,9.82,-1.02,0.08,2.15,1.05,0,">1 nonsynonymous","Y35P I138W",2
"lib2","SARS-CoV-2","ATTTGTAATCAAGACG",4,26.95,9.09,-1.75,0.14,1.66,1.05,0.01,">1 nonsynonymous","T140D Y178E",2
"lib2","SARS-CoV-2","ATTTGTAATTTTAATT",8,67.02,10.53,-0.3,0.03,2.94,1.06,0,"1 nonsynonymous","A89P",1
"lib2","SARS-CoV-2","ATTTGTACCCTATGAT",2,39.4,10.69,-0.14,0.07,2.79,1.18,0,"1 nonsynonymous","P191L",1
"lib2","SARS-CoV-2","ATTTGTATCACATTGA",1,35.09,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37T K56L N92W N107R L162V",5
"lib2","SARS-CoV-2","ATTTGTCAAGTTTGTG",2,21.25,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","R27D K56S C150G N171I",4
"lib2","SARS-CoV-2","ATTTGTCACCTCTGTA",2,9.38,8.99,-1.84,0.31,1.94,1.17,0.03,">1 nonsynonymous","R136A I142Y",2
"lib2","SARS-CoV-2","ATTTGTCAGATAACTG",3,2.28,NA,NA,NA,NA,NA,NA,"stop","G51Y Y121V C158*",3
"lib2","SARS-CoV-2","ATTTGTCCCTATCATC",3,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D98I D112G T148C S184H",5
"lib2","SARS-CoV-2","ATTTGTCCTACCTCTG",4,6.66,NA,NA,NA,NA,NA,NA,"stop","D68V F99*",2
"lib2","SARS-CoV-2","ATTTGTCTGACTCCCC",7,16.9,6.17,-4.67,0.96,1.5,1.17,0.03,">1 nonsynonymous","S41P K94D V173C A190E",4
"lib2","SARS-CoV-2","ATTTGTGAGTTTCAAT",2,105.64,9.23,-1.61,0.06,2.73,1.04,0,">1 nonsynonymous","N107D T201E",2
"lib2","SARS-CoV-2","ATTTGTGATTGGATGG",4,23.05,10.67,-0.17,0.06,2.9,1,0,">1 nonsynonymous","A105T K132N",2
"lib2","SARS-CoV-2","ATTTGTGATTTCACCG",2,6.46,10.8,-0.03,0.11,3,1.06,0,">1 nonsynonymous","P54V V115H",2
"lib2","SARS-CoV-2","ATTTGTTCGTGCACCG",4,31.2,9.24,-1.59,0.2,1.81,1.06,0.02,">1 nonsynonymous","G9M S19M F62L",3
"lib2","SARS-CoV-2","ATTTGTTCTAGTTTGG",17,3.4,NA,NA,NA,NA,NA,NA,"stop","K26M N58S D98L G146L Y165D N171L P197*",7
"lib2","SARS-CoV-2","ATTTGTTGAGAAGTAG",2,20.18,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A33R T55S Y119F Q176S",4
"lib2","SARS-CoV-2","ATTTGTTGATCTTTAT",6,135.92,10.42,-0.42,0.04,2.98,1.02,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","ATTTGTTTCATGTTAA",16,301.81,10,-0.84,0.03,2.93,1.05,0,">1 nonsynonymous","D98E Y119R",2
"lib2","SARS-CoV-2","ATTTTAAAAAAACAAA",9,77.59,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F70E F167P",2
"lib2","SARS-CoV-2","ATTTTAAAAGACACCT",3,6.89,9.26,-1.57,0.15,2.9,1.18,0.01,">1 nonsynonymous","L5P N107H",2
"lib2","SARS-CoV-2","ATTTTAAAATCGCTGG",2,14.37,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V32A T55R F62I D90Q D97H C150L",6
"lib2","SARS-CoV-2","ATTTTAAACTATTTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K F44L T63M A105T S129H E141P",6
"lib2","SARS-CoV-2","ATTTTAAACTGATTAA",1,10.8,9.73,-1.11,0.16,2.69,1.03,0.01,">1 nonsynonymous","N13C S41N I142F",3
"lib2","SARS-CoV-2","ATTTTAAATACTTAAG",1,32.89,10.88,0.05,0.07,2.92,1.1,0,">1 nonsynonymous","N24K Y35M",2
"lib2","SARS-CoV-2","ATTTTAAATTCTCACA",2,5.64,11.18,0.35,0.22,2.87,1.04,0.01,">1 nonsynonymous","N40L T100F",2
"lib2","SARS-CoV-2","ATTTTAACATACTACC",1,22.32,10.3,-0.54,0.07,2.93,1.09,0,">1 nonsynonymous","T55C V115A",2
"lib2","SARS-CoV-2","ATTTTAAGAGACTAAG",2,3903.54,10.57,-0.27,0.03,2.96,1.03,0,">1 nonsynonymous","L5M D98Y E141D K198R",4
"lib2","SARS-CoV-2","ATTTTAAGCTGCAAGC",1,87.27,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","A22L C31R C158L",3
"lib2","SARS-CoV-2","ATTTTAAGTAGTGAAG",3,33.37,10.78,-0.05,0.03,3,1.02,0,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","ATTTTAAGTATGTTAA",10,43.64,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","K48W D90Q G101N",3
"lib2","SARS-CoV-2","ATTTTAATAACCCCTG",2,42.03,10.47,-0.37,0.04,2.98,1,0,">1 nonsynonymous","Y35C E186D",2
"lib2","SARS-CoV-2","ATTTTAATACGGCCAG",5,27.19,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","T15I A81Y N92G S113T",4
"lib2","SARS-CoV-2","ATTTTAATGCCCCAAG",5,55.64,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y50S S113D",2
"lib2","SARS-CoV-2","ATTTTACAAACTGATG",1,15.94,10.42,-0.42,0.06,2.91,1.08,0,"1 nonsynonymous","Y35G",1
"lib2","SARS-CoV-2","ATTTTACAAATATAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y N40A C49K Y66C G101C Q163T",6
"lib2","SARS-CoV-2","ATTTTACAACGCGTCA",15,229.02,10.65,-0.18,0.03,2.91,1.09,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","ATTTTACATAGCGTAT",12,49.6,7.59,-3.24,0.23,1.5,1.09,0.02,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","ATTTTACATCTCTAAA",3,19.55,10.08,-0.75,0.12,2.67,1.02,0.01,">1 nonsynonymous","N4R D34G S43M F62A",4
"lib2","SARS-CoV-2","ATTTTACCAAATTAGG",4,42.12,8.51,-2.33,0.11,1.83,1.07,0.01,">1 nonsynonymous","G9F F12R K87V P149Q Y178V",5
"lib2","SARS-CoV-2","ATTTTACCCATAGTTC",5,52.77,8.31,-2.53,0.36,1.5,1,0.05,">1 nonsynonymous","N1L P96W K198L",3
"lib2","SARS-CoV-2","ATTTTACCCCCCACGT",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39F K48H F134N",3
"lib2","SARS-CoV-2","ATTTTACCCCTGAGGT",2,13.37,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D68R Y143D E154H",3
"lib2","SARS-CoV-2","ATTTTACCTATGAGTA",6,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y D68M F126L Q163A",4
"lib2","SARS-CoV-2","ATTTTACGAATGAGTT",13,108.74,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T55S T85L Y93L",3
"lib2","SARS-CoV-2","ATTTTACGCCAGTTTG",3,105.88,10.75,-0.08,0.04,2.97,1.04,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","ATTTTACTGGACCCTC",15,6.65,NA,NA,NA,NA,NA,NA,"stop","E10* C158L V180A",3
"lib2","SARS-CoV-2","ATTTTACTTTTCAATG",3,30.7,9.31,-1.53,0.15,2.01,1.1,0.01,">1 nonsynonymous","I2K Y50L P197R",3
"lib2","SARS-CoV-2","ATTTTAGACAATTCAA",4,111.38,9.64,-1.2,0.09,1.88,1.09,0,">1 nonsynonymous","G9S V173T",2
"lib2","SARS-CoV-2","ATTTTAGATCGAGTGA",2,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A S19R V37M R136N T201N",5
"lib2","SARS-CoV-2","ATTTTAGATGCCACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100L S139W",2
"lib2","SARS-CoV-2","ATTTTAGCAAAATAAA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","I72F Y119* N151C",3
"lib2","SARS-CoV-2","ATTTTAGCATGAAAAA",4,106.66,10.29,-0.55,0.04,2.79,1.11,0,">1 nonsynonymous","E135R Q168A",2
"lib2","SARS-CoV-2","ATTTTAGCCACCATTT",4,39.76,10.79,-0.05,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTTAGCGCGCACAA",2,42.44,10.82,-0.01,0.08,2.89,1.12,0,">1 nonsynonymous","L5S K132S",2
"lib2","SARS-CoV-2","ATTTTAGGAATGGATT",14,216.68,10.63,-0.21,0.03,2.95,1.05,0,">1 nonsynonymous","K26V T85D",2
"lib2","SARS-CoV-2","ATTTTAGGGTAAGGCG",2,18.25,10.71,-0.12,0.07,2.89,1.09,0,">1 nonsynonymous","A42G L111F",2
"lib2","SARS-CoV-2","ATTTTATAAGGAACAA",1,27.48,9.36,-1.47,0.15,1.97,1.16,0.01,">1 nonsynonymous","F8V V37A I138L T148Q G152I",5
"lib2","SARS-CoV-2","ATTTTATAATAGACCA",16,409.29,10.01,-0.82,0.03,2.83,1.04,0,">1 nonsynonymous","L5I R16S C31P C61W T201L",5
"lib2","SARS-CoV-2","ATTTTATAATATGGAC",3,94.48,9.86,-0.98,0.08,2.03,1.11,0,">1 nonsynonymous","G9K Q84T P149N Y178S",4
"lib2","SARS-CoV-2","ATTTTATACCAAATAC",6,48.14,9.73,-1.11,0.08,2.31,1.09,0,">1 nonsynonymous","C61N K94V",2
"lib2","SARS-CoV-2","ATTTTATACTTTAGTG",6,51.15,10.57,-0.27,0.04,2.91,1.07,0,">1 nonsynonymous","K87I T201K",2
"lib2","SARS-CoV-2","ATTTTATAGACCCAAG",2,0.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","ATTTTATAGCCATGCA",1,12.56,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y35V A42F S69K L95P N130S S147T N151R",7
"lib2","SARS-CoV-2","ATTTTATAGTACACCC",3,9.76,6,-4.84,2,3,1.05,0,">1 nonsynonymous","A81C V180E",2
"lib2","SARS-CoV-2","ATTTTATATGGAAATA",4,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P C31Q Y123F T148R P161L Y165P",6
"lib2","SARS-CoV-2","ATTTTATGCATCAATT",2,21.04,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L60G S69E P82A",3
"lib2","SARS-CoV-2","ATTTTATGCCTTGAAG",2,16.26,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F44D L95P",2
"lib2","SARS-CoV-2","ATTTTATGCGTAAATG",12,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D D59G Q144L",3
"lib2","SARS-CoV-2","ATTTTATTACGAAAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","T85L N107*",2
"lib2","SARS-CoV-2","ATTTTATTACGGCAAC",3,149.51,10.83,-0.01,0.05,2.97,1.05,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","ATTTTATTCATATAAA",13,90.15,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S45L Y93R",2
"lib2","SARS-CoV-2","ATTTTATTGTAAGCAC",2,6.88,6.77,-4.07,0.35,1.5,1.01,0.02,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","ATTTTCAAACAAAACT",1,120.41,10.51,-0.33,0.03,2.91,1.08,0,">1 nonsynonymous","Y66S L122M E141N N151K",4
"lib2","SARS-CoV-2","ATTTTCAAACAAACTA",6,1.06,NA,NA,NA,NA,NA,NA,"stop","V11S V65* Y91H A105T L122E",5
"lib2","SARS-CoV-2","ATTTTCAAACGTGGCC",5,69.83,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5M F44R L95N Y175R F185L T201V",6
"lib2","SARS-CoV-2","ATTTTCAACGAGGCAA",3,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G N40I Y91S W106Y T170W",5
"lib2","SARS-CoV-2","ATTTTCAAGAGTTAGG",9,13.68,6.12,-4.71,0.35,2.64,1.1,0,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","ATTTTCACCACTCATT",3,43.21,10.23,-0.6,0.06,2.89,1.13,0,">1 nonsynonymous","I2V E154H",2
"lib2","SARS-CoV-2","ATTTTCACCGATGTAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52S G83V D97N N120F",4
"lib2","SARS-CoV-2","ATTTTCAGACCAAAGC",4,69.16,10.79,-0.05,0.06,2.95,1.05,0,">1 nonsynonymous","G9P S53E L60R N130K V173F",5
"lib2","SARS-CoV-2","ATTTTCAGTACATAAG",2,7.11,10.68,-0.15,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTTCAGTTAACTAG",14,157.7,10.01,-0.82,0.07,2.62,1.08,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","ATTTTCATCAGGTGAT",2,33.08,10.77,-0.06,0.06,2.87,1.08,0,">1 nonsynonymous","L5P N58T N109V T201S",4
"lib2","SARS-CoV-2","ATTTTCATCAGTAGTT",4,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30L N58R Y119S",3
"lib2","SARS-CoV-2","ATTTTCATGTCCATGC",7,93.03,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V52C K94D K132N S147F",4
"lib2","SARS-CoV-2","ATTTTCCAATGACAGG",7,35.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3S G86N R124P",3
"lib2","SARS-CoV-2","ATTTTCCGACGGTAGA",5,12.87,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V71L L183S",2
"lib2","SARS-CoV-2","ATTTTCCTTTGAGTGG",9,103.93,10.7,-0.14,0.04,2.96,1.06,0,">1 nonsynonymous","A14S V37L",2
"lib2","SARS-CoV-2","ATTTTCGAAATAAATA",12,55.96,9.72,-1.11,0.1,1.77,1.08,0,">1 nonsynonymous","R25S F134Q",2
"lib2","SARS-CoV-2","ATTTTCGCAGAGTCAA",15,378.72,10.82,-0.01,0.04,2.85,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","ATTTTCGGAACGAAAG",5,150.2,8.68,-2.16,0.06,2.79,1.06,0,">1 nonsynonymous","G117P L125F",2
"lib2","SARS-CoV-2","ATTTTCGGGCTAGGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D A33L F62C A105I",4
"lib2","SARS-CoV-2","ATTTTCTAACAAACTA",6,0.57,NA,NA,NA,NA,NA,NA,"stop","I2S A33M T55* G116*",4
"lib2","SARS-CoV-2","ATTTTCTACATTACTA",2,29.79,10.16,-0.68,0.07,2.99,1,0,">1 nonsynonymous","R16M I88V L122R G152Q",4
"lib2","SARS-CoV-2","ATTTTCTACTCGAAAC",3,0.55,NA,NA,NA,NA,NA,NA,"stop","C6S F70E G101P N120V V181S T201*",6
"lib2","SARS-CoV-2","ATTTTCTATAAGACGA",5,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R E76A K87L F99H",4
"lib2","SARS-CoV-2","ATTTTCTATTAGCCAT",1,51.44,8.77,-2.06,0.18,1.5,1,0.01,">1 nonsynonymous","I28V S41T V77T Q84R",4
"lib2","SARS-CoV-2","ATTTTCTATTATTCGA",16,119.73,7.65,-3.19,0.11,1.5,1.06,0,">1 nonsynonymous","N58C G86S",2
"lib2","SARS-CoV-2","ATTTTCTCCAATTAAA",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D G117S S139T T170S",4
"lib2","SARS-CoV-2","ATTTTCTGAGACGTAC",7,58.63,10.86,0.03,0.07,2.79,1.22,0,"1 nonsynonymous","N24R",1
"lib2","SARS-CoV-2","ATTTTCTGGATAGAAC",4,43.68,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L57N E135P",2
"lib2","SARS-CoV-2","ATTTTGAAAAGTAAAT",2,67.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G83M S113C T148N Q176I P197W",5
"lib2","SARS-CoV-2","ATTTTGAACAAATAGT",4,20.69,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S69Q V103W K128T Q144D L183G",5
"lib2","SARS-CoV-2","ATTTTGAATCAATAAC",1,1.01,NA,NA,NA,NA,NA,NA,"stop","F99* T201S",2
"lib2","SARS-CoV-2","ATTTTGAATCTATAAA",6,84.27,9.8,-1.03,0.1,2.37,1.09,0,">1 nonsynonymous","C61Y A105V",2
"lib2","SARS-CoV-2","ATTTTGAATTCTTTTA",1,29.18,9.52,-1.31,0.13,2.54,1.03,0.01,">1 nonsynonymous","S45C D90L",2
"lib2","SARS-CoV-2","ATTTTGAATTGAACGA",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T F17L T63S Y91L K114D S129F",6
"lib2","SARS-CoV-2","ATTTTGACAGATGGAT",8,41.44,6.3,-4.54,1.03,1.5,1.36,0.05,">1 nonsynonymous","L5C N40I C49V Q79V Y91F D112T N120K",7
"lib2","SARS-CoV-2","ATTTTGACTACCACAG",3,51.29,10.37,-0.47,0.06,2.89,1.06,0,"1 nonsynonymous","G146H",1
"lib2","SARS-CoV-2","ATTTTGACTTTGAATT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","W106* V115Y T170Y",3
"lib2","SARS-CoV-2","ATTTTGAGAAGAAATG",11,95.04,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C6K F99I R124K G196R",4
"lib2","SARS-CoV-2","ATTTTGAGATAAGAAG",1,15.04,11,0.17,0.1,2.97,1.07,0,">1 nonsynonymous","D59Q K128R",2
"lib2","SARS-CoV-2","ATTTTGAGGCGAAATC",3,21.64,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","L57R R179M",2
"lib2","SARS-CoV-2","ATTTTGAGGCGGAACG",20,297.37,8.31,-2.52,0.12,2.18,1.06,0.01,">1 nonsynonymous","L57S N157S",2
"lib2","SARS-CoV-2","ATTTTGAGGGTGCTAC",2,82.01,10.87,0.04,0.05,2.9,1.12,0,"1 nonsynonymous","N130R",1
"lib2","SARS-CoV-2","ATTTTGATTACTATAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L C61Y V103R Y159T",4
"lib2","SARS-CoV-2","ATTTTGCAAAATGAGG",9,85.76,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","T15L D59N Y165R",3
"lib2","SARS-CoV-2","ATTTTGCACTTACAGA",8,216.12,10.17,-0.67,0.05,2.58,1.07,0,">1 nonsynonymous","T15K R27G T148A T201M",4
"lib2","SARS-CoV-2","ATTTTGCAGAGTCGGA",5,14.51,8.43,-2.4,0.23,1.72,1.18,0.04,">1 nonsynonymous","F8H F12V N40S T201L",4
"lib2","SARS-CoV-2","ATTTTGCATCTCAAAC",3,71.28,10.2,-0.63,0.11,2.47,1.04,0.01,"1 nonsynonymous","A81N",1
"lib2","SARS-CoV-2","ATTTTGCTATACAGTC",1,22.83,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A22G N40H S45R F62L C158R",5
"lib2","SARS-CoV-2","ATTTTGGAGAAGAGCA",7,110.42,10.38,-0.46,0.02,2.94,1.04,0,">1 nonsynonymous","T100F S129F P149F F160A",4
"lib2","SARS-CoV-2","ATTTTGGATATGGAGA",14,228.06,10.8,-0.04,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTTGGCTACTGTCT",10,92.58,10.01,-0.82,0.07,2.59,1.06,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","ATTTTGGTAGCTGACC",6,206.5,10.89,0.05,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","ATTTTGTCACATGCTG",13,178.09,9.05,-1.78,0.06,2.12,1.08,0,">1 nonsynonymous","Y93F P169M",2
"lib2","SARS-CoV-2","ATTTTGTCTCATCGGA",4,55.93,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4T V20Y G174T",3
"lib2","SARS-CoV-2","ATTTTGTGTACGAGTC",7,145.78,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C150T Y159I Q163N Y175V",4
"lib2","SARS-CoV-2","ATTTTGTTATCAGCGA",2,10.42,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","E135D F167R",2
"lib2","SARS-CoV-2","ATTTTGTTGACGTATG",8,32.67,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G74C F99R K128C I142L T148I T201S",6
"lib2","SARS-CoV-2","ATTTTGTTGTGCTCCA",4,46.31,10.7,-0.14,0.07,2.88,1.14,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","ATTTTTAAAAGTCTTA",5,89.05,10.09,-0.75,0.03,2.92,1.05,0,">1 nonsynonymous","Q84A G146Y",2
"lib2","SARS-CoV-2","ATTTTTAAACAACGTT",8,135.85,9.39,-1.45,0.08,1.99,1.03,0,">1 nonsynonymous","L57C D97F E141N",3
"lib2","SARS-CoV-2","ATTTTTAAATCGAGAC",6,174.46,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F70M T100C R124W F156I",4
"lib2","SARS-CoV-2","ATTTTTAACGATAAAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","L131* A192T",2
"lib2","SARS-CoV-2","ATTTTTAAGAGCCAAT",9,129.61,10.1,-0.74,0.06,2.59,1.03,0,">1 nonsynonymous","G83Q P133F",2
"lib2","SARS-CoV-2","ATTTTTAAGCGTCCTA",3,71.11,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8Y K56F D68G Y93Q Y123R Y178L",6
"lib2","SARS-CoV-2","ATTTTTAGAAATTTTG",2,60.03,10.83,-0.01,0.06,2.88,1.11,0,">1 nonsynonymous","I2L S129V",2
"lib2","SARS-CoV-2","ATTTTTAGCAAATTGT",5,2.41,NA,NA,NA,NA,NA,NA,"stop","A89* T140K",2
"lib2","SARS-CoV-2","ATTTTTAGGTATAAAT",3,24.52,10.28,-0.56,0.06,2.92,1,0,">1 nonsynonymous","N1L A145T",2
"lib2","SARS-CoV-2","ATTTTTAGGTGTATCA",4,208.56,8.62,-2.21,0.09,2.83,1.09,0,">1 nonsynonymous","G117L G174R",2
"lib2","SARS-CoV-2","ATTTTTATCGCGTTCC",4,61.99,10.95,0.12,0.06,2.93,1.09,0,"1 nonsynonymous","K132M",1
"lib2","SARS-CoV-2","ATTTTTCAAACGACGG",6,31.61,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","P54F G74T N107S",3
"lib2","SARS-CoV-2","ATTTTTCAGGAGTTCT",10,118.12,9.78,-1.05,0.07,2.38,1.09,0,"1 nonsynonymous","V181L",1
"lib2","SARS-CoV-2","ATTTTTCCATGCGCTG",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K N151E Y178T",3
"lib2","SARS-CoV-2","ATTTTTCCCAGTTGCC",12,5.43,NA,NA,NA,NA,NA,NA,"stop","K26S A81P V180*",3
"lib2","SARS-CoV-2","ATTTTTCCGAGATCAG",6,53.64,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T46A F62G N120P P133Y T148L",5
"lib2","SARS-CoV-2","ATTTTTCGAAGCGGGT",3,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P L162T",2
"lib2","SARS-CoV-2","ATTTTTCGCTTCATGT",16,370.55,10.18,-0.66,0.05,2.74,1.04,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","ATTTTTCTAAACTGAT",5,25.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4Y T55D V77S G86R D98I F167A",6
"lib2","SARS-CoV-2","ATTTTTCTCAGGCTGA",3,61.95,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","D97T Y119L P177H",3
"lib2","SARS-CoV-2","ATTTTTCTTGTTCTGA",4,46.29,6,-4.84,1.56,1.62,1.08,0,">1 nonsynonymous","R25F L57A G101S T201L",4
"lib2","SARS-CoV-2","ATTTTTGAGCAGGTCG",3,26.86,8.24,-2.6,0.16,1.8,1.05,0.01,">1 nonsynonymous","N64M F167L",2
"lib2","SARS-CoV-2","ATTTTTGATCCGCAAG",9,212.61,10.76,-0.08,0.02,2.96,1.04,0,">1 nonsynonymous","N4G L60K T100Y",3
"lib2","SARS-CoV-2","ATTTTTGATTTACCAG",1,8.29,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1A F99Q T140K E154M",4
"lib2","SARS-CoV-2","ATTTTTGCCCCGATTC",8,165.72,9.03,-1.81,0.06,2.88,1.08,0,">1 nonsynonymous","N1R S41W Y119G S147V",4
"lib2","SARS-CoV-2","ATTTTTGCCTACTGGG",2,26.68,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A33V N118A Q144A Y175M",4
"lib2","SARS-CoV-2","ATTTTTGGACTAATAG",5,35.6,7.25,-3.58,0.35,1.5,1.17,0.05,">1 nonsynonymous","A89P D137S",2
"lib2","SARS-CoV-2","ATTTTTGGTCACGATA",6,251.61,10.47,-0.36,0.04,2.84,1.05,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","ATTTTTGTATACTACC",5,6.48,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib2","SARS-CoV-2","ATTTTTGTTACCTAAT",5,45.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S41T N107I R179P",3
"lib2","SARS-CoV-2","ATTTTTTAGGTATTAC",4,28.62,8.28,-2.55,0.19,2.02,1.16,0.02,">1 nonsynonymous","S41V P161N",2
"lib2","SARS-CoV-2","ATTTTTTCAACCAAGC",4,16.55,10.9,0.06,0.13,2.83,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","ATTTTTTCCACCCACC",3,44.82,10.19,-0.64,0.13,2.63,1,0.01,"1 nonsynonymous","Q168G",1
"lib2","SARS-CoV-2","ATTTTTTCCGTACGAT",5,44.44,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","K48Q G101Y G146V T201G",4
"lib2","SARS-CoV-2","ATTTTTTTGATTTAGT",3,3.44,NA,NA,NA,NA,NA,NA,"stop","T3V F8* D98I P149Y G155L",5
"lib2","SARS-CoV-2","CAAAAAAAAAACCCAT",7,106.25,10.74,-0.1,0.02,2.97,1.02,0,">1 nonsynonymous","G9R N64T",2
"lib2","SARS-CoV-2","CAAAAAAAAAACTGGT",4,51.62,9.75,-1.09,0.06,2.88,1.1,0,">1 nonsynonymous","A89S F156T",2
"lib2","SARS-CoV-2","CAAAAAAAAAACTTAA",1,8.18,8.45,-2.38,0.37,1.5,1,0.06,">1 nonsynonymous","N58H R78P G86K",3
"lib2","SARS-CoV-2","CAAAAAAAAATCGCGA",3,45.03,9.84,-1,0.09,2.22,1.12,0,">1 nonsynonymous","L57R I138R",2
"lib2","SARS-CoV-2","CAAAAAAAAGTCCACA",5,10.91,NA,NA,NA,NA,NA,NA,"stop","V37C G51* D98A Y119* T148I Q176M",6
"lib2","SARS-CoV-2","CAAAAAAAATCAAAAG",10,61.37,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","I28N S43T T55C S69R G155T",5
"lib2","SARS-CoV-2","CAAAAAAAATCAAATC",10,103.12,10.32,-0.51,0.04,2.89,1.12,0,"1 nonsynonymous","P169N",1
"lib2","SARS-CoV-2","CAAAAAAAATGCTTCA",2,42.37,10.27,-0.57,0.07,2.82,1.04,0,">1 nonsynonymous","A67V S139H V173Q",3
"lib2","SARS-CoV-2","CAAAAAAACAGAATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16N V115D P149S Q168K V173*",5
"lib2","SARS-CoV-2","CAAAAAAACGACCCCA",1,5.51,8.08,-2.75,0.48,1.73,1,0.04,">1 nonsynonymous","P7R T15F N118R",3
"lib2","SARS-CoV-2","CAAAAAAACTCGAAAT",3,72.18,10.2,-0.64,0.17,2.49,1.08,0.02,">1 nonsynonymous","T85P D90S",2
"lib2","SARS-CoV-2","CAAAAAAACTTTGTGC",8,124.45,10.8,-0.03,0.05,2.83,1.16,0,">1 nonsynonymous","Y50W T55D",2
"lib2","SARS-CoV-2","CAAAAAAATAAACTAA",7,29.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T63N A89T S108I I142T T148I",5
"lib2","SARS-CoV-2","CAAAAAAATAATAGTT",3,42.15,10.82,-0.02,0.07,2.84,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAAAATATAAGTT",5,121.3,10.61,-0.23,0.05,2.91,1.05,0,">1 nonsynonymous","K87Y K128I",2
"lib2","SARS-CoV-2","CAAAAAAATCCGCATG",4,167.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6D S36L D90T D98A Y119I",5
"lib2","SARS-CoV-2","CAAAAAAATGAAGCAA",2,7.9,9.09,-1.74,0.39,1.5,1.06,0.06,">1 nonsynonymous","D90N P96L",2
"lib2","SARS-CoV-2","CAAAAAAATTATAATA",3,5.02,7.45,-3.39,1.65,3,1.32,0.05,">1 nonsynonymous","N13E F47L L131S",3
"lib2","SARS-CoV-2","CAAAAAAATTGAGGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22C G51D V77L Y93M C102V Y123W",6
"lib2","SARS-CoV-2","CAAAAAACAAAAATAA",5,59.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A89V Y119C G146W V173A A192T",5
"lib2","SARS-CoV-2","CAAAAAACAAATGTTA",4,48.92,10.78,-0.06,0.07,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAAACAACAAAAA",12,27.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V20L D34F D97H P191G",4
"lib2","SARS-CoV-2","CAAAAAACAAGCGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I104C G116* I142S",3
"lib2","SARS-CoV-2","CAAAAAACAATTAGGC",2,31.94,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S41A L60Y E141R C150R",4
"lib2","SARS-CoV-2","CAAAAAACATTTAGCT",1,19.4,10.2,-0.64,0.08,2.79,1.03,0.01,">1 nonsynonymous","P7V A42L P54L L60N",4
"lib2","SARS-CoV-2","CAAAAAACATTTGACA",1,54.31,9.94,-0.89,0.07,2.11,1.04,0,">1 nonsynonymous","S43F Y123L I138R",3
"lib2","SARS-CoV-2","CAAAAAACCAAACACT",9,49.7,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A33R F99P W106N N151L",4
"lib2","SARS-CoV-2","CAAAAAACCACAGGCA",5,1.67,NA,NA,NA,NA,NA,NA,"stop","K87* A105Q Y119L Q176P",4
"lib2","SARS-CoV-2","CAAAAAACCACCGTAG",6,6.87,10.51,-0.33,0.12,2.82,1.14,0.01,">1 nonsynonymous","P96N Q144A",2
"lib2","SARS-CoV-2","CAAAAAACCAGGGAAT",9,120.63,10.18,-0.66,0.05,2.89,1.04,0,">1 nonsynonymous","A18D S45D C61W Y175F",4
"lib2","SARS-CoV-2","CAAAAAACTAATCATG",12,235.43,10.22,-0.62,0.03,2.73,1.04,0,">1 nonsynonymous","W106M V173A",2
"lib2","SARS-CoV-2","CAAAAAACTCGACTCT",5,47.43,10.6,-0.23,0.06,2.94,1.06,0,">1 nonsynonymous","S45R R78K",2
"lib2","SARS-CoV-2","CAAAAAACTGCATAAA",2,0.34,NA,NA,NA,NA,NA,NA,"stop","T15R E154* Y159P",3
"lib2","SARS-CoV-2","CAAAAAAGCGATTAAA",1,9.4,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D97E V103W S113A S139Q P169H",5
"lib2","SARS-CoV-2","CAAAAAAGCTTATCAA",6,0.99,NA,NA,NA,NA,NA,NA,"stop","S19* Q84L G101E K132G V173I",5
"lib2","SARS-CoV-2","CAAAAAAGGAGGTCAG",2,21.2,8.47,-2.37,0.29,1.5,1,0.04,">1 nonsynonymous","C150R Q168L F185R",3
"lib2","SARS-CoV-2","CAAAAAAGGTGCACTG",6,110.22,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","A81P",1
"lib2","SARS-CoV-2","CAAAAAAGTAAAATAG",3,5.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14Y R25F G83Y K132V P149A",5
"lib2","SARS-CoV-2","CAAAAAAGTAAGGAGG",1,34.82,10.05,-0.79,0.12,2.67,1,0.01,">1 nonsynonymous","W106M T148D",2
"lib2","SARS-CoV-2","CAAAAAATAACAGATT",1,76.09,10.94,0.1,0.06,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAAAAATACATTCAT",3,56.27,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N92P I138Q E154S",3
"lib2","SARS-CoV-2","CAAAAAATACCGAACT",6,16.78,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V65L G83L I104T C150W T201I",5
"lib2","SARS-CoV-2","CAAAAAATACTTTTAT",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P A89R P149L",3
"lib2","SARS-CoV-2","CAAAAAATATAGGCGG",1,0.37,NA,NA,NA,NA,NA,NA,"stop","G9M N40Y Y175*",3
"lib2","SARS-CoV-2","CAAAAAATATTTATCA",4,23.11,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y50I V103Y S139R P149S V173T T201W",6
"lib2","SARS-CoV-2","CAAAAAATCAGAGAGC",8,123.15,10.86,0.03,0.05,2.95,1.06,0,">1 nonsynonymous","N110T S200L",2
"lib2","SARS-CoV-2","CAAAAAATCGTTACGG",7,96.17,10.78,-0.06,0.03,2.97,1.04,0,"1 nonsynonymous","V32E",1
"lib2","SARS-CoV-2","CAAAAAATGATAGAAC",10,136.66,10.77,-0.07,0.04,2.95,1.02,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","CAAAAAATTACCGATC",24,85.45,6,-4.84,2,1.5,1.34,0.02,">1 nonsynonymous","Y143N E186F",2
"lib2","SARS-CoV-2","CAAAAAATTAGCGGGA",1,8.13,10.14,-0.7,0.32,2.31,1.05,0.02,">1 nonsynonymous","A14P T201K",2
"lib2","SARS-CoV-2","CAAAAAATTCTCCTTT",8,117.9,9.8,-1.04,0.06,2.76,1.1,0,">1 nonsynonymous","N13H V32T S43C K114N",4
"lib2","SARS-CoV-2","CAAAAACAAAAAAGAG",2,11.77,6.21,-4.63,0.75,3,1.19,0.01,">1 nonsynonymous","P54R P96H S139T N157P K199L",5
"lib2","SARS-CoV-2","CAAAAACAAAAACATA",5,1.07,NA,NA,NA,NA,NA,NA,"stop","N13L V37* C61F D98L",4
"lib2","SARS-CoV-2","CAAAAACAAAGAATTG",3,0,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib2","SARS-CoV-2","CAAAAACAACCGCGAT",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R S184E",2
"lib2","SARS-CoV-2","CAAAAACAATATATAT",6,84.47,9.7,-1.13,0.09,2.56,1.06,0,">1 nonsynonymous","C6A D90S",2
"lib2","SARS-CoV-2","CAAAAACAATGCGGAC",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S F62P R73G Y178K",4
"lib2","SARS-CoV-2","CAAAAACACAGGGACG",3,71.18,10.35,-0.49,0.03,2.98,1.01,0,">1 nonsynonymous","L60S Y175F",2
"lib2","SARS-CoV-2","CAAAAACACCCAAACG",4,78.53,10.77,-0.06,0.04,2.91,1.08,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","CAAAAACAGCACCTCG",2,43.78,10.89,0.05,0.1,2.75,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAACCAATGCCAA",7,88.08,7.51,-3.33,0.24,1.5,1.13,0.02,">1 nonsynonymous","A18G K48Y F126I K132G",4
"lib2","SARS-CoV-2","CAAAAACCACGCGCTA",11,65.32,6.22,-4.61,0.65,1.5,1.16,0.02,">1 nonsynonymous","L57R V103T",2
"lib2","SARS-CoV-2","CAAAAACCACTTATGA",10,190.57,10.77,-0.06,0.02,2.94,1.07,0,">1 nonsynonymous","F8L V37F A81E",3
"lib2","SARS-CoV-2","CAAAAACCATGAAACA",1,5.56,8,-2.84,0.18,2.34,1,0.01,">1 nonsynonymous","C61V D137L",2
"lib2","SARS-CoV-2","CAAAAACCCAGACAAC",10,161.86,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F8K C158Y",2
"lib2","SARS-CoV-2","CAAAAACCGATATGCC",4,20.1,10.69,-0.15,0.03,3,1,0,">1 nonsynonymous","L95I K128L",2
"lib2","SARS-CoV-2","CAAAAACCGATTTGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N64* G174I",2
"lib2","SARS-CoV-2","CAAAAACGATAGGGCA",1,10.01,7.73,-3.11,0.23,1.5,1,0.01,">1 nonsynonymous","L60G E141Q E154Y L162M",4
"lib2","SARS-CoV-2","CAAAAACGCGTAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6G Q84M D90C A105N L125* T201L",6
"lib2","SARS-CoV-2","CAAAAACGCTGTAGGA",4,20.07,8.63,-2.2,0.21,1.65,1.13,0.02,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","CAAAAACTAAATAAAC",4,42.07,10.36,-0.47,0.05,2.87,1.07,0,">1 nonsynonymous","R27I R136L",2
"lib2","SARS-CoV-2","CAAAAACTAGTAACTA",2,11.62,10.75,-0.09,0.11,2.94,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAACTGACAATAG",3,5.3,NA,NA,NA,NA,NA,NA,"stop","N1T C6K W106*",3
"lib2","SARS-CoV-2","CAAAAACTGCGGCGCT",5,45.64,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","C49D G83C W106N S129G",4
"lib2","SARS-CoV-2","CAAAAACTTTTACAGC",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L K114S P161A T201W",4
"lib2","SARS-CoV-2","CAAAAAGAAAGGTTTT",1,50.37,10.86,0.03,0.07,2.91,1.09,0,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","CAAAAAGAAGTGATCA",8,147.66,9.95,-0.89,0.06,2.47,1.04,0,">1 nonsynonymous","L57T F62A F134W",3
"lib2","SARS-CoV-2","CAAAAAGACCAAGATG",9,53.67,7.01,-3.82,0.27,1.5,1.07,0.02,"1 nonsynonymous","V71E",1
"lib2","SARS-CoV-2","CAAAAAGACGAATGTA",4,255.79,7.16,-3.67,0.36,1.5,1.2,0.03,">1 nonsynonymous","P7S N30L P54S S113F",4
"lib2","SARS-CoV-2","CAAAAAGACGTCAATC",10,45.44,6,-4.84,1.41,1.5,1.11,0.01,">1 nonsynonymous","D97S Y159D",2
"lib2","SARS-CoV-2","CAAAAAGAGTCGAAAC",5,16.57,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","N13C C61F N120V P149R G155N T170E",6
"lib2","SARS-CoV-2","CAAAAAGATAACACTT",2,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K W106R Y165S",3
"lib2","SARS-CoV-2","CAAAAAGATAGAAACT",10,383.92,10.78,-0.05,0.04,2.95,1.06,0,">1 nonsynonymous","N4T D90N N120K",3
"lib2","SARS-CoV-2","CAAAAAGATCACCGCG",1,40.72,8.48,-2.36,0.09,3,1.02,0,">1 nonsynonymous","N40R P54T Y119C",3
"lib2","SARS-CoV-2","CAAAAAGCAACCCCAT",3,45.36,8.67,-2.17,0.09,1.9,1.11,0,">1 nonsynonymous","C6M T46E N151V",3
"lib2","SARS-CoV-2","CAAAAAGCAGCATTAC",6,38.21,10.72,-0.12,0.05,2.89,1.13,0,"1 nonsynonymous","K128A",1
"lib2","SARS-CoV-2","CAAAAAGCAGTAAATG",3,11.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77A I88L",2
"lib2","SARS-CoV-2","CAAAAAGCCAACGTAA",1,16.98,10.88,0.05,0.08,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAAGTCATTTGAT",13,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C N58S Q176R",3
"lib2","SARS-CoV-2","CAAAAAGTTATTTGAA",9,434.11,10.82,-0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAAGTTTGAACTA",6,127.81,9.16,-1.67,0.08,2.72,1.07,0,">1 nonsynonymous","L5G D97A I142S",3
"lib2","SARS-CoV-2","CAAAAATAAACAACGC",4,114.19,10.16,-0.67,0.03,2.98,1.02,0,"1 nonsynonymous","Y91W",1
"lib2","SARS-CoV-2","CAAAAATAAAGATGAA",6,187.4,8.65,-2.18,0.11,2.56,1.05,0,">1 nonsynonymous","S69Y G117S",2
"lib2","SARS-CoV-2","CAAAAATAATATAGTA",1,24.6,6.84,-4,0.31,1.5,1.15,0.02,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","CAAAAATACTTGATAC",4,453.52,8.7,-2.14,0.06,2.93,1.07,0,">1 nonsynonymous","G9R E141D G166L",3
"lib2","SARS-CoV-2","CAAAAATATACCCCGC",2,27.55,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F8Q V20G",2
"lib2","SARS-CoV-2","CAAAAATCAACTTTAT",6,24.1,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","Y21I R73V A105Y L122K R136K",5
"lib2","SARS-CoV-2","CAAAAATCATAGGATA",3,30.77,7.97,-2.86,0.17,1.76,1.02,0.01,">1 nonsynonymous","D90M G146V",2
"lib2","SARS-CoV-2","CAAAAATCGAACTTGC",2,5.47,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","A14S N58A S139V V182F",4
"lib2","SARS-CoV-2","CAAAAATCTAAAAAGA",5,59.18,10.34,-0.5,0.02,2.97,1.01,0,">1 nonsynonymous","A67I D97H",2
"lib2","SARS-CoV-2","CAAAAATCTAATTGTC",1,9.95,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","E10H F167A",2
"lib2","SARS-CoV-2","CAAAAATCTTAGCTAT",5,94.81,10.33,-0.5,0.02,2.88,1.1,0,">1 nonsynonymous","N40L G116P",2
"lib2","SARS-CoV-2","CAAAAATGAACTTTGC",2,0.2,NA,NA,NA,NA,NA,NA,"stop","A14C Y35F F134* L162E",4
"lib2","SARS-CoV-2","CAAAAATGAGGCCTAA",9,78.89,8.68,-2.16,0.12,1.96,1.07,0.01,">1 nonsynonymous","Y21F F44P R73S Y91F T148L",5
"lib2","SARS-CoV-2","CAAAAATGCGCACCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","C61T P149*",2
"lib2","SARS-CoV-2","CAAAAATGCTAAATTT",13,117.62,9.72,-1.12,0.08,2.33,1.04,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","CAAAAATGGTTCACAA",5,20.93,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","CAAAAATGTAAAACAC",13,311.57,8.79,-2.05,0.13,1.5,1.04,0.01,">1 nonsynonymous","S45F Y91A",2
"lib2","SARS-CoV-2","CAAAAATTAAAATAAT",8,122.2,10.82,-0.02,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAAATTGCAAAAAC",1,40.11,10.46,-0.37,0.06,2.97,1.06,0,">1 nonsynonymous","S29R Y35I S43P C61L N130C",5
"lib2","SARS-CoV-2","CAAAAATTGCATTTGG",4,61.42,10.8,-0.03,0.03,2.93,1.07,0,">1 nonsynonymous","K132H T201I",2
"lib2","SARS-CoV-2","CAAAACAAAATTGACG",3,43.91,10.87,0.04,0.06,2.99,1.04,0,">1 nonsynonymous","S43R D90N",2
"lib2","SARS-CoV-2","CAAAACAAAGCACGTA",2,62.02,7.88,-2.96,0.25,1.5,1.13,0.02,">1 nonsynonymous","V37C W106V Y119S",3
"lib2","SARS-CoV-2","CAAAACAAAGGGTTAT",2,23.44,10.94,0.11,0.06,3,1.02,0,"1 nonsynonymous","L5V",1
"lib2","SARS-CoV-2","CAAAACAAAGTAAGAA",13,1.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167A",1
"lib2","SARS-CoV-2","CAAAACAAATATTAGC",1,13.13,9.82,-1.01,0.19,2.05,1.07,0.02,">1 nonsynonymous","D97V A105I",2
"lib2","SARS-CoV-2","CAAAACAAATGGATCG",2,30.24,10.41,-0.43,0.03,3,1.03,0,">1 nonsynonymous","F126V F160Y",2
"lib2","SARS-CoV-2","CAAAACAACAATCCTA",2,94.19,10.62,-0.22,0.05,2.88,1.09,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","CAAAACAACCTTACTA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A V52Q G83Y Y91I",4
"lib2","SARS-CoV-2","CAAAACAACGCAGGCG",2,0.32,NA,NA,NA,NA,NA,NA,"stop","G117F F134L A145*",3
"lib2","SARS-CoV-2","CAAAACAAGCAACTCT",16,72.69,8.4,-2.44,0.07,1.64,1.09,0,">1 nonsynonymous","N107T Q144R",2
"lib2","SARS-CoV-2","CAAAACAAGCATACGA",2,51.39,10.9,0.06,0.04,3,1.01,0,"1 nonsynonymous","I72V",1
"lib2","SARS-CoV-2","CAAAACAATCTTAGCC",13,118.59,8.49,-2.35,0.32,1.5,1,0.05,">1 nonsynonymous","L95A T100Y",2
"lib2","SARS-CoV-2","CAAAACAATGATCGAA",3,7.55,9.49,-1.35,0.12,2.2,1.06,0.01,">1 nonsynonymous","P169Y Y178S",2
"lib2","SARS-CoV-2","CAAAACACACCCAAAA",2,11.83,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","N4V V65F K87N C102Y",4
"lib2","SARS-CoV-2","CAAAACACCCGAAATT",7,12.69,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C49V S113F Y119Q Y123K S147I C158R",6
"lib2","SARS-CoV-2","CAAAACAGATATACGC",2,19.3,10.67,-0.17,0.07,2.98,1,0,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","CAAAACAGATCTCATC",3,25.1,10.32,-0.51,0.05,2.93,1.06,0,">1 nonsynonymous","N4P N30A",2
"lib2","SARS-CoV-2","CAAAACAGCACTGTAT",3,80.02,10.87,0.03,0.06,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAAACAGGGACGATA",3,11.69,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T15L T55P P96G E141S Y165L",5
"lib2","SARS-CoV-2","CAAAACATAAGAGTCG",17,119.84,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N1M N64R Y93C P149L",4
"lib2","SARS-CoV-2","CAAAACATAAGGACAA",3,119.66,9.97,-0.87,0.07,2.39,1,0,"1 nonsynonymous","Q84D",1
"lib2","SARS-CoV-2","CAAAACATAGCTTGAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C49R D90* S147L",3
"lib2","SARS-CoV-2","CAAAACATCCTATTAG",5,31.97,7.27,-3.56,0.44,1.5,1.23,0.06,">1 nonsynonymous","A14N Y93P P149E",3
"lib2","SARS-CoV-2","CAAAACATGTACAAGT",6,3,NA,NA,NA,NA,NA,NA,"stop","Y91* F99P Y178I",3
"lib2","SARS-CoV-2","CAAAACATTGTTAAAT",2,65.17,8.66,-2.17,0.08,2.89,1.05,0,">1 nonsynonymous","K56P T170E",2
"lib2","SARS-CoV-2","CAAAACCAAACGAGTA",2,21.75,6,-4.84,2,3,1.04,0,">1 nonsynonymous","E10S D75G R136V Y159V",4
"lib2","SARS-CoV-2","CAAAACCAATGATTGT",3,103.78,9.59,-1.24,0.04,2.14,1.1,0,">1 nonsynonymous","V52L W106F V173G",3
"lib2","SARS-CoV-2","CAAAACCACGGCCATT",7,52.35,6,-4.84,0.86,1.5,1.12,0.01,">1 nonsynonymous","T100P S129C",2
"lib2","SARS-CoV-2","CAAAACCAGGTCCAAA",16,239.69,10.78,-0.06,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAACCCCAAATCAT",7,90.72,6,-4.84,1.41,1.5,1.13,0.01,">1 nonsynonymous","F17M K56R F99R F160S Q176S",5
"lib2","SARS-CoV-2","CAAAACCCCCTTGTCG",1,5.95,6,-4.84,2,1.5,1.04,0.05,">1 nonsynonymous","Y143S C150E",2
"lib2","SARS-CoV-2","CAAAACCGCTAGATAG",4,42.41,6.2,-4.63,1.23,1.5,1.29,0.08,">1 nonsynonymous","S36L C49G K56R Y119V",4
"lib2","SARS-CoV-2","CAAAACCGGACATTTT",4,15.89,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Q79P Y91K",2
"lib2","SARS-CoV-2","CAAAACCGTTTATTTT",1,10.17,10.73,-0.11,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAACCTAAGAGTGA",1,5.65,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50R D59C S200C",3
"lib2","SARS-CoV-2","CAAAACCTACACTAGC",7,148.53,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","CAAAACCTCATAACTA",2,22.72,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","G86Y D97P N107F S200V",4
"lib2","SARS-CoV-2","CAAAACCTGTTAACCG",1,7.4,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","W106M C158W",2
"lib2","SARS-CoV-2","CAAAACCTTTACGCCA",3,14.78,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","P82N D112V N118P F160S P169S",5
"lib2","SARS-CoV-2","CAAAACGAAAACATCA",3,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57E F62T V103F",3
"lib2","SARS-CoV-2","CAAAACGAATAAATGT",1,19.06,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","D90A N107D Y119V K128P V180P L188Y",6
"lib2","SARS-CoV-2","CAAAACGACACCTCAG",2,6.79,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","F47S Y91M W106S",3
"lib2","SARS-CoV-2","CAAAACGACGAACAAG",2,51.71,10.83,-0.01,0.07,2.9,1.09,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","CAAAACGAGATTCTAC",14,2.53,NA,NA,NA,NA,NA,NA,"stop","P133*",1
"lib2","SARS-CoV-2","CAAAACGATCTTTATT",20,139.19,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56S N92Q D137E",3
"lib2","SARS-CoV-2","CAAAACGATGCAGTTT",2,111.14,9.94,-0.9,0.06,2.12,1.04,0,">1 nonsynonymous","D90V S108T",2
"lib2","SARS-CoV-2","CAAAACGATTAATTAC",6,7.46,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86C E186V",2
"lib2","SARS-CoV-2","CAAAACGCATAAAATT",4,79.88,9.39,-1.45,0.07,1.92,1.06,0,">1 nonsynonymous","N64I Y178R",2
"lib2","SARS-CoV-2","CAAAACGCATCCGGGC",3,71.43,10.83,-0.01,0.06,2.91,1.1,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","CAAAACGCATTATTAT",2,13.49,8.23,-2.6,0.31,1.5,1.13,0.06,"1 nonsynonymous","Y21K",1
"lib2","SARS-CoV-2","CAAAACGCTCCGAATT",13,91.88,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G101W N120R",2
"lib2","SARS-CoV-2","CAAAACGGCACACGGA",10,191,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14S R25P L60W T100S F167V T201E",6
"lib2","SARS-CoV-2","CAAAACGGTTCCGAGG",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y N40H F99I V173G",4
"lib2","SARS-CoV-2","CAAAACGTAAAATCCT",1,7.93,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","S45L F99T",2
"lib2","SARS-CoV-2","CAAAACGTAACGATCT",1,50.77,9.24,-1.6,0.09,2.76,1.16,0,">1 nonsynonymous","T3I K56S T170L T201N",4
"lib2","SARS-CoV-2","CAAAACGTGATCGAGG",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q C49G T140R",3
"lib2","SARS-CoV-2","CAAAACGTGCCAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R N58H Y119W",3
"lib2","SARS-CoV-2","CAAAACGTGCGGAGGT",13,6.79,NA,NA,NA,NA,NA,NA,"stop","F8N Q84* L95Q I104* T140S P161T",6
"lib2","SARS-CoV-2","CAAAACGTGGAGAGGA",3,1.75,NA,NA,NA,NA,NA,NA,"stop","D34L S41V I80E D90H W106T L125S G146* E154*",8
"lib2","SARS-CoV-2","CAAAACGTGGTGAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","S139G C150* N151V",3
"lib2","SARS-CoV-2","CAAAACGTGTAAAAAA",5,63.54,10.14,-0.69,0.07,2.89,1.09,0,"1 nonsynonymous","Q168M",1
"lib2","SARS-CoV-2","CAAAACGTTGAAAGCG",5,45.1,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G101D R127G",2
"lib2","SARS-CoV-2","CAAAACGTTTGTGCGG",9,29.57,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2Y P96L N109H",3
"lib2","SARS-CoV-2","CAAAACTAAAGCAAAA",5,80.57,10.73,-0.1,0.03,2.98,1.05,0,">1 nonsynonymous","V32Y F160P",2
"lib2","SARS-CoV-2","CAAAACTAAAGTACAG",8,65.13,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L60P S113L",2
"lib2","SARS-CoV-2","CAAAACTATTTTAATC",10,78.6,9.58,-1.26,0.05,2.9,1.07,0,"1 nonsynonymous","N118F",1
"lib2","SARS-CoV-2","CAAAACTCATTCCTGT",4,76.46,10.79,-0.05,0.03,2.98,1.03,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","CAAAACTCCAAGACTC",2,32.19,7.01,-3.83,0.26,1.5,1.04,0.02,">1 nonsynonymous","A18I N107P K132G P149R",4
"lib2","SARS-CoV-2","CAAAACTCCTCAGTAC",1,5.7,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","D34E N64T C102L Y143E",4
"lib2","SARS-CoV-2","CAAAACTCGAATTCAT",5,26.02,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T3C R73I A89N D112C G155C",5
"lib2","SARS-CoV-2","CAAAACTCGTAAAACA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N1Y F17Y S36K T63S L122* G146W G155E Y175F T201F",9
"lib2","SARS-CoV-2","CAAAACTCTCTCCCGT",4,76.19,10.17,-0.66,0.06,2.69,1.04,0,">1 nonsynonymous","N40E D90S I138A",3
"lib2","SARS-CoV-2","CAAAACTGATGAAGCT",1,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","CAAAACTGCAATTACA",7,21.08,9.34,-1.5,0.23,1.79,1.1,0.02,">1 nonsynonymous","A22E L60W Y121N",3
"lib2","SARS-CoV-2","CAAAACTGTATTTCAA",2,6.83,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","I72Y Y121N R179S",3
"lib2","SARS-CoV-2","CAAAACTGTGAGTATA",3,42.67,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","T46S G83D Y121W Y159S T201W",5
"lib2","SARS-CoV-2","CAAAACTTAAGGTAAT",1,50.49,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F8K Y165H N171L",3
"lib2","SARS-CoV-2","CAAAACTTAGGAGCTA",10,81.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T63E A89V G116L R124H E135N",5
"lib2","SARS-CoV-2","CAAAACTTATACAAAA",5,34.16,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S19K N24T V103T G117V P161K",5
"lib2","SARS-CoV-2","CAAAACTTATATGCAA",7,0.59,NA,NA,NA,NA,NA,NA,"stop","C6L S29* A81F Y121E N151Y F167P",6
"lib2","SARS-CoV-2","CAAAACTTTATAATTG",13,5.2,NA,NA,NA,NA,NA,NA,"stop","F99* L162D T170R Y175L",4
"lib2","SARS-CoV-2","CAAAACTTTGCAATAT",1,16.14,9.55,-1.28,0.13,2.57,1,0.01,">1 nonsynonymous","C61G G155Y",2
"lib2","SARS-CoV-2","CAAAACTTTGTCGGCT",6,1.98,NA,NA,NA,NA,NA,NA,"stop","L57A C61* N118R T201Y",4
"lib2","SARS-CoV-2","CAAAACTTTTCGCCAT",9,4.5,NA,NA,NA,NA,NA,NA,"stop","C61* I88S",2
"lib2","SARS-CoV-2","CAAAAGAAAAGCAAAA",8,1.21,NA,NA,NA,NA,NA,NA,"stop","L162P K198*",2
"lib2","SARS-CoV-2","CAAAAGAAAATCCGGT",9,159.61,10.77,-0.07,0.03,3,1.02,0,">1 nonsynonymous","N1A D97N V173E",3
"lib2","SARS-CoV-2","CAAAAGAAAGGGCGGA",6,146.77,8.67,-2.16,0.07,2.6,1.08,0,">1 nonsynonymous","N120S Y143C",2
"lib2","SARS-CoV-2","CAAAAGAAATTGTAAC",5,49.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14C P82N A105C Y175K",4
"lib2","SARS-CoV-2","CAAAAGAACTCGCTGG",3,58.11,10.06,-0.77,0.08,2.59,1.07,0,">1 nonsynonymous","D90G F160W",2
"lib2","SARS-CoV-2","CAAAAGAAGCAACGCT",21,311.14,10.51,-0.33,0.03,2.92,1.07,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","CAAAAGAAGTGCATCA",3,18.94,8.65,-2.18,0.3,1.5,1,0.06,">1 nonsynonymous","G152Y C158H",2
"lib2","SARS-CoV-2","CAAAAGAATATTGTCT",5,82.35,9.06,-1.77,0.08,2.88,1.05,0,">1 nonsynonymous","G117H V153F",2
"lib2","SARS-CoV-2","CAAAAGAATTACTAGT",7,75.96,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D68C I80M G117P F160K T201H",5
"lib2","SARS-CoV-2","CAAAAGACGAATATAG",3,36.51,9.87,-0.97,0.1,2.52,1.03,0,">1 nonsynonymous","F17V I104L",2
"lib2","SARS-CoV-2","CAAAAGACGTTCAAAA",6,0.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","CAAAAGACTAAAGAAG",3,0.3,NA,NA,NA,NA,NA,NA,"stop","N110E Q176* V181C",3
"lib2","SARS-CoV-2","CAAAAGACTACCCAGA",14,168.35,9.92,-0.91,0.07,2.37,1.02,0,">1 nonsynonymous","F8V F47M",2
"lib2","SARS-CoV-2","CAAAAGAGGACCACGT",2,0.44,NA,NA,NA,NA,NA,NA,"stop","G51K L60E Y123* T148I K199T",5
"lib2","SARS-CoV-2","CAAAAGAGTACGACTG",2,0.46,NA,NA,NA,NA,NA,NA,"stop","A42S V71L L122T Y143* F160G P177T",6
"lib2","SARS-CoV-2","CAAAAGATAAGATGAG",11,85.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25V Y39A V52M L131M",4
"lib2","SARS-CoV-2","CAAAAGATAATATGCA",4,58.83,8.18,-2.66,0.34,1.58,1.15,0.04,">1 nonsynonymous","L5M R16M G83I Y119V",4
"lib2","SARS-CoV-2","CAAAAGATATCGACCC",6,18.69,NA,NA,NA,NA,NA,NA,"stop","F17P S45K K56R I72V D90* P149T V153I",7
"lib2","SARS-CoV-2","CAAAAGATATGCAAAC",5,64.63,10.11,-0.72,0.04,2.93,1.07,0,">1 nonsynonymous","K87V F134E G152E T201M",4
"lib2","SARS-CoV-2","CAAAAGATCTGCAAAA",7,83.43,10.76,-0.08,0.04,2.95,1.06,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","CAAAAGATGAGTGAAA",5,156.35,10.45,-0.38,0.04,2.92,1.05,0,">1 nonsynonymous","F47L V173A",2
"lib2","SARS-CoV-2","CAAAAGATTAAGGAAG",6,71.95,10.3,-0.53,0.05,2.78,1.1,0,">1 nonsynonymous","V65L F134D",2
"lib2","SARS-CoV-2","CAAAAGCATACTATTA",3,44.92,8.26,-2.58,0.1,2.47,1.05,0.01,">1 nonsynonymous","S41I G117F G174S",3
"lib2","SARS-CoV-2","CAAAAGCATATACTTA",4,53.49,10.47,-0.36,0.06,2.9,1.06,0,">1 nonsynonymous","I80V D97G",2
"lib2","SARS-CoV-2","CAAAAGCATGCTAACC",4,51.23,6.23,-4.6,0.89,1.5,1.31,0.04,">1 nonsynonymous","A89D P161A",2
"lib2","SARS-CoV-2","CAAAAGCATGTGTCTG",2,9.08,10.55,-0.29,0.21,2.55,1,0.02,">1 nonsynonymous","V52D N171F",2
"lib2","SARS-CoV-2","CAAAAGCCAAAAAGTA",6,29.94,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N1Q G83V P96C T140L",4
"lib2","SARS-CoV-2","CAAAAGCCACTATCCA",4,13.18,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","K48N L60P Y119M D137Y",4
"lib2","SARS-CoV-2","CAAAAGCCCCCACGGC",1,47.75,10.05,-0.78,0.04,2.98,1.03,0,">1 nonsynonymous","G9R A42R T55S I72L N120Y T148M",6
"lib2","SARS-CoV-2","CAAAAGCCCCCTTCCG",2,51.81,6,-4.84,2,3,1.22,0,">1 nonsynonymous","G86T L95H E154C",3
"lib2","SARS-CoV-2","CAAAAGCCCTAAAAAG",1,22.19,6,-4.84,2,3,1.13,0,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","CAAAAGCGGCCACGTA",4,6.97,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N92F I104N G116L",3
"lib2","SARS-CoV-2","CAAAAGCGTTCCTGCT",4,75.26,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S19P V32S N58K D68K E141S",5
"lib2","SARS-CoV-2","CAAAAGCTAACCATAC",9,190.48,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F99V Y175M",2
"lib2","SARS-CoV-2","CAAAAGCTATAAGAAT",3,74.35,10.53,-0.31,0.06,2.88,1.1,0,">1 nonsynonymous","T63H S129R F160G",3
"lib2","SARS-CoV-2","CAAAAGCTGATAATCT",3,19.23,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","E10K F44H L95G L162R",4
"lib2","SARS-CoV-2","CAAAAGGAGTAAATGG",1,31.1,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C31V D98T R124D",3
"lib2","SARS-CoV-2","CAAAAGGAGTTAAGTA",3,105.89,10.59,-0.25,0.04,2.94,1.05,0,">1 nonsynonymous","T3R D98G",2
"lib2","SARS-CoV-2","CAAAAGGATACGTTTG",5,122.16,10.62,-0.21,0.05,2.96,1.05,0,">1 nonsynonymous","N120A G155R",2
"lib2","SARS-CoV-2","CAAAAGGATCAGTATG",7,0.42,NA,NA,NA,NA,NA,NA,"stop","N13Y S19L F99K F156*",4
"lib2","SARS-CoV-2","CAAAAGGCGCTAACAC",20,84.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L V180E T201D",3
"lib2","SARS-CoV-2","CAAAAGGCGGGTATGT",3,2.71,NA,NA,NA,NA,NA,NA,"stop","C61* K87D I104V Y121T",4
"lib2","SARS-CoV-2","CAAAAGGCGTGGGTGC",4,35.16,10.27,-0.57,0.06,2.83,1.12,0,">1 nonsynonymous","Y35W T63F G116F L183I",4
"lib2","SARS-CoV-2","CAAAAGGGAACACTAT",13,87.57,8.84,-2,0.06,2.16,1.08,0,">1 nonsynonymous","C61S Y121T A190Y",3
"lib2","SARS-CoV-2","CAAAAGGGACACTGAC",7,2.42,NA,NA,NA,NA,NA,NA,"stop","L60* N107G",2
"lib2","SARS-CoV-2","CAAAAGGGTAGAACCA",1,6.77,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","N58S N107F A145D N157L",4
"lib2","SARS-CoV-2","CAAAAGGGTCATCTAT",9,328.81,6.41,-4.43,0.2,1.5,1.14,0,">1 nonsynonymous","N4G Y175G",2
"lib2","SARS-CoV-2","CAAAAGGTAGACTATT",7,148.25,10.87,0.04,0.05,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAAAGTACAAGATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K87W K94E D97G L125P L131P N171K S200*",7
"lib2","SARS-CoV-2","CAAAAGTACCGTACCG",6,16.19,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","S43R R127W L183A",3
"lib2","SARS-CoV-2","CAAAAGTCATGAATGG",2,56.86,10.03,-0.81,0.08,2.69,1.05,0,">1 nonsynonymous","G9F V20A S45D N130S",4
"lib2","SARS-CoV-2","CAAAAGTCCTTTGCGG",10,63.95,6,-4.84,0.38,1.99,1.08,0,">1 nonsynonymous","K26T Q84R K87W G146M Y165E",5
"lib2","SARS-CoV-2","CAAAAGTTAAGACGTA",3,48.19,10.31,-0.53,0.04,3,1.04,0,">1 nonsynonymous","K87T S184R",2
"lib2","SARS-CoV-2","CAAAAGTTAATTTTCA",4,86.88,6,-4.84,0.78,1.5,1.13,0.01,">1 nonsynonymous","L60D R73Y I104L N120D",4
"lib2","SARS-CoV-2","CAAAAGTTACATATTC",1,5.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","CAAAAGTTACCGATCG",4,7.65,7.18,-3.66,0.26,1.5,1.1,0.03,">1 nonsynonymous","K56N F99C",2
"lib2","SARS-CoV-2","CAAAAGTTTCGAGTAT",3,10.47,6.29,-4.55,0.85,1.5,1.16,0.01,">1 nonsynonymous","I2D I88E S200H",3
"lib2","SARS-CoV-2","CAAAATAAAAATCAAC",4,1.26,NA,NA,NA,NA,NA,NA,"stop","V11Q P54* S113R T201M",4
"lib2","SARS-CoV-2","CAAAATAAAATATAAC",3,6.23,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","D59A T85G F99L G116A Y121D Y143L P149S",7
"lib2","SARS-CoV-2","CAAAATAAACGGCACG",3,73.98,10.39,-0.45,0.04,2.93,1,0,"1 nonsynonymous","E135N",1
"lib2","SARS-CoV-2","CAAAATAAATGGGAAC",3,57.65,8.61,-2.23,0.1,2.46,1.08,0,">1 nonsynonymous","S19A N107P V173N",3
"lib2","SARS-CoV-2","CAAAATAACGTGAAAT",1,2.45,NA,NA,NA,NA,NA,NA,"stop","N107T L122*",2
"lib2","SARS-CoV-2","CAAAATAACTAACATG",14,95.79,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","D59V F70L R127W P149F",4
"lib2","SARS-CoV-2","CAAAATAACTGTAAGT",3,89.2,9.51,-1.33,0.1,2.47,1.04,0,">1 nonsynonymous","R27V G116V V173S",3
"lib2","SARS-CoV-2","CAAAATAACTGTTCCA",3,6.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6A K87F L131C S164L",4
"lib2","SARS-CoV-2","CAAAATAAGAACAAAC",3,76.42,9.92,-0.92,0.06,2.39,1.11,0,">1 nonsynonymous","G9T L57S P149S K199M",4
"lib2","SARS-CoV-2","CAAAATAAGAACGTGC",2,13.36,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","S19Q Y119C G172S S184D",4
"lib2","SARS-CoV-2","CAAAATAATAAAGTTT",1,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17V S41Q C61R P82K K94D",5
"lib2","SARS-CoV-2","CAAAATAATACAAAAA",7,93.85,10.82,-0.01,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAAATAATGTGTAGT",6,109.19,10.59,-0.25,0.06,2.89,1.09,0,">1 nonsynonymous","A89P T201S",2
"lib2","SARS-CoV-2","CAAAATAATTTATCCG",6,112.96,10.75,-0.09,0.03,2.97,1.04,0,"1 nonsynonymous","A18E",1
"lib2","SARS-CoV-2","CAAAATAATTTCCACT",2,51.7,10.96,0.12,0.07,2.96,1.06,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","CAAAATACAGACATAA",9,86.24,9.96,-0.88,0.07,2.24,1.05,0,">1 nonsynonymous","T15E W106I",2
"lib2","SARS-CoV-2","CAAAATACAGATAGAG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","A89M C102I F134* V180L",4
"lib2","SARS-CoV-2","CAAAATACAGTGTTCT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","D68E G101* G146H",3
"lib2","SARS-CoV-2","CAAAATACATTCCTGA",2,25.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F47T C61I N92S W106M K198A",5
"lib2","SARS-CoV-2","CAAAATACATTCTTAA",4,34.29,9.31,-1.53,0.1,2.86,1.06,0,">1 nonsynonymous","T100A T170F",2
"lib2","SARS-CoV-2","CAAAATACGAAAAAAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","G9* K87V D97V V103K S113T",5
"lib2","SARS-CoV-2","CAAAATACGACCCAAT",6,22.84,6.48,-4.36,0.75,1.5,1.22,0.04,">1 nonsynonymous","T3S W23E S45H A81V R127P I138C",6
"lib2","SARS-CoV-2","CAAAATACTGTGTCCA",3,15.66,6.15,-4.68,0.61,3,1.16,0.01,">1 nonsynonymous","G83W D90I S113E",3
"lib2","SARS-CoV-2","CAAAATAGAGAAACAT",12,66.64,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6I Y165V",2
"lib2","SARS-CoV-2","CAAAATAGTGAACTCA",6,0.55,NA,NA,NA,NA,NA,NA,"stop","G9* S41H Q84S S139R E186H",5
"lib2","SARS-CoV-2","CAAAATAGTTCACGTT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","CAAAATATAGAAATAA",2,10.13,10.8,-0.03,0.09,2.84,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAAAATATATACCAAT",2,6.24,7.31,-3.53,0.47,1.5,1,0.05,">1 nonsynonymous","N4T S19V S43H R73S",4
"lib2","SARS-CoV-2","CAAAATATATGAATCT",6,1.54,NA,NA,NA,NA,NA,NA,"stop","R27* L38S H189Y",3
"lib2","SARS-CoV-2","CAAAATATCGAAGAAA",4,74.64,10.72,-0.11,0.05,2.94,1.07,0,">1 nonsynonymous","N151A K199E",2
"lib2","SARS-CoV-2","CAAAATATCTAGAACT",24,103.84,6,-4.84,1.68,1.5,1.2,0.02,">1 nonsynonymous","L5Y I80T",2
"lib2","SARS-CoV-2","CAAAATATGAAAGGGT",6,1.25,NA,NA,NA,NA,NA,NA,"stop","P133* G152Y Q168V",3
"lib2","SARS-CoV-2","CAAAATCAAATAAAAT",2,6.06,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","A33K F47W C61K Q84H G116Y P169C",6
"lib2","SARS-CoV-2","CAAAATCAACCATACC",6,216.61,10.62,-0.22,0.03,2.96,1.03,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","CAAAATCAATAATTTT",4,51.89,7.94,-2.89,0.23,1.71,1.09,0.02,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","CAAAATCAATAGTTTA",5,148.32,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R16N G86I F99S E154S Q176R",5
"lib2","SARS-CoV-2","CAAAATCACTGTATGA",4,11.33,9.84,-1,0.25,2.54,1,0.01,">1 nonsynonymous","N13R S45C V173L",3
"lib2","SARS-CoV-2","CAAAATCAGAAAACGG",1,23.15,10.41,-0.43,0.07,2.9,1.03,0,"1 nonsynonymous","K87G",1
"lib2","SARS-CoV-2","CAAAATCAGAGTACAA",4,939.66,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I2L W23V Y35V Y50I I88R P96N R179F",7
"lib2","SARS-CoV-2","CAAAATCAGATATGAG",8,64.46,8.33,-2.5,0.27,1.5,1.07,0.03,">1 nonsynonymous","R136M P149A Y165M",3
"lib2","SARS-CoV-2","CAAAATCAGCTAAACC",3,37.37,9.97,-0.87,0.05,2.97,1.03,0,"1 nonsynonymous","V115C",1
"lib2","SARS-CoV-2","CAAAATCAGGTATCAA",10,89.81,6.54,-4.29,0.6,1.5,1.14,0.05,">1 nonsynonymous","Y91S F99N G174S K198H",4
"lib2","SARS-CoV-2","CAAAATCATGTGACCA",5,91.75,10.14,-0.69,0.04,2.88,1.06,0,">1 nonsynonymous","T3M I142P",2
"lib2","SARS-CoV-2","CAAAATCATTGCGGAA",10,9.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36Y P82E L131I P149T F160T",5
"lib2","SARS-CoV-2","CAAAATCCACTTGAAC",1,21.89,9.86,-0.98,0.17,2.47,1.02,0.01,">1 nonsynonymous","A81R G116L",2
"lib2","SARS-CoV-2","CAAAATCCATTTGATT",6,99.66,10.67,-0.17,0.04,2.88,1.08,0,">1 nonsynonymous","D97S K128M",2
"lib2","SARS-CoV-2","CAAAATCCGAACACAC",8,41.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D59R V103E P133A",3
"lib2","SARS-CoV-2","CAAAATCCTTGCTCTG",11,121.42,6.19,-4.65,0.52,1.5,1.18,0.01,">1 nonsynonymous","F62C D90R P133K P149L",4
"lib2","SARS-CoV-2","CAAAATCGGGCTAGAT",6,276.23,10.1,-0.74,0.04,2.75,1.05,0,">1 nonsynonymous","T3S N40F S129C",3
"lib2","SARS-CoV-2","CAAAATCGTTTGAATG",9,38.28,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A42S I88M D112C K128Q G146V G166Q",6
"lib2","SARS-CoV-2","CAAAATCTAACCCAGC",1,48.4,10.09,-0.74,0.07,2.81,1.06,0,"1 nonsynonymous","Y159W",1
"lib2","SARS-CoV-2","CAAAATCTCATAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","CAAAATCTGATAATTA",1,44.73,10.41,-0.43,0.12,2.82,1.04,0.01,">1 nonsynonymous","K87N K199L",2
"lib2","SARS-CoV-2","CAAAATCTGTTACAAG",7,48.88,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","R16L P82Q G83S G101C P197V",5
"lib2","SARS-CoV-2","CAAAATCTGTTGCAAG",2,0.39,NA,NA,NA,NA,NA,NA,"stop","G146* G155N",2
"lib2","SARS-CoV-2","CAAAATCTTAGATTGA",13,224.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V153D G172N",2
"lib2","SARS-CoV-2","CAAAATCTTAGCCGGC",10,160.4,10.18,-0.66,0.05,2.57,1.04,0,">1 nonsynonymous","N4L S129L",2
"lib2","SARS-CoV-2","CAAAATCTTATTGTGC",10,252.3,9.98,-0.85,0.04,2.85,1.04,0,">1 nonsynonymous","Y35E I142L",2
"lib2","SARS-CoV-2","CAAAATGAAAAAATAT",3,14.93,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N13A L60T L162W",3
"lib2","SARS-CoV-2","CAAAATGAATATAACT",1,28.12,10.52,-0.32,0.07,2.89,1.09,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","CAAAATGAATGATTAA",3,21.43,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","G9F W23F Y35I T63Y I80K N92R W106S",7
"lib2","SARS-CoV-2","CAAAATGAGTATCTAC",4,3.04,NA,NA,NA,NA,NA,NA,"stop","T55* Y175V",2
"lib2","SARS-CoV-2","CAAAATGCATTCCGCT",2,9.88,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","N4A D59R T85N R127D A192S",5
"lib2","SARS-CoV-2","CAAAATGCCTGTACCT",5,71.58,10.84,0.01,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAATGGCGAAGGAA",12,133.59,10.72,-0.11,0.05,2.88,1.14,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","CAAAATGGGTTAAGCC",6,142.59,9.16,-1.67,0.12,1.69,1.06,0.01,">1 nonsynonymous","T63F Y178V S184L",3
"lib2","SARS-CoV-2","CAAAATGTGAAGAAAT",2,26.83,10.64,-0.19,0.03,2.93,1.07,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","CAAAATGTTCACGCCT",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A S41Y D90L Y119W V180D",5
"lib2","SARS-CoV-2","CAAAATGTTTCTTTAG",2,41.99,10.12,-0.72,0.07,2.82,1,0,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","CAAAATTAAACCGATC",17,60.65,6.18,-4.66,0.7,1.5,1.17,0.02,">1 nonsynonymous","D34I A105I R127H",3
"lib2","SARS-CoV-2","CAAAATTAACTTATAA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","G9T Y91L K128* G155I",4
"lib2","SARS-CoV-2","CAAAATTAAGCGGTTT",4,44.13,10.65,-0.18,0.04,2.98,1.02,0,"1 nonsynonymous","G116R",1
"lib2","SARS-CoV-2","CAAAATTAATTACAGG",6,15.48,7.24,-3.59,0.26,1.5,1.15,0.04,">1 nonsynonymous","S41F G86L",2
"lib2","SARS-CoV-2","CAAAATTAATTCTAAA",5,91.24,7.37,-3.47,0.27,1.5,1.09,0.02,">1 nonsynonymous","K94R W106M E135L",3
"lib2","SARS-CoV-2","CAAAATTACTAAGAGA",2,31.77,7.86,-2.98,0.22,1.77,1.22,0.01,">1 nonsynonymous","D112T E135M",2
"lib2","SARS-CoV-2","CAAAATTAGAAATAGA",5,0.28,NA,NA,NA,NA,NA,NA,"stop","G51Q G101V N110* Y119L E141F",5
"lib2","SARS-CoV-2","CAAAATTATCCACCCC",2,13.85,10.6,-0.23,0.08,2.87,1.14,0,">1 nonsynonymous","S36W Y91F",2
"lib2","SARS-CoV-2","CAAAATTCATTATCGA",5,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57A F99Y G117C N130P",4
"lib2","SARS-CoV-2","CAAAATTCATTCCTAT",6,74.82,10.08,-0.76,0.08,2.4,1.07,0,">1 nonsynonymous","W106R T140N",2
"lib2","SARS-CoV-2","CAAAATTCCAATATCC",7,75.97,7.01,-3.83,0.16,1.97,1.1,0.01,"1 nonsynonymous","C150K",1
"lib2","SARS-CoV-2","CAAAATTCCCTTCGAT",2,5.72,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","S41E Y91S S164W Y178L",4
"lib2","SARS-CoV-2","CAAAATTCTAATTCCC",13,2.05,NA,NA,NA,NA,NA,NA,"stop","V20A D68* V77I L131R",4
"lib2","SARS-CoV-2","CAAAATTTGCACTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M R27Y C49D A105T L187F P197I",6
"lib2","SARS-CoV-2","CAAAATTTTCAGGGCA",3,26.03,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","R27G D90S R127F N151L F156P",5
"lib2","SARS-CoV-2","CAAAATTTTTAAGTCC",11,50.14,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V65W D90A L162G V173M",4
"lib2","SARS-CoV-2","CAAAATTTTTGACTCT",4,42.7,10.95,0.11,0.06,2.87,1.14,0,"1 nonsynonymous","Y123K",1
"lib2","SARS-CoV-2","CAAACAAAAAATCGAA",2,108.61,10.26,-0.58,0.06,2.67,1.02,0,">1 nonsynonymous","P96S T100N",2
"lib2","SARS-CoV-2","CAAACAAAAATTGTAA",4,23.84,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","V37S F44K T63S F70C N110R",5
"lib2","SARS-CoV-2","CAAACAAAACGCTAAA",11,106.48,10.81,-0.02,0.03,3,1.01,0,"1 nonsynonymous","A18H",1
"lib2","SARS-CoV-2","CAAACAAAAGCCCTTC",2,49.66,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L60I N92F Y143E Q176T",4
"lib2","SARS-CoV-2","CAAACAAACGAACCTG",1,71.94,10.32,-0.52,0.04,2.91,1.01,0,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","CAAACAAACGTGTTCG",9,21.41,6.9,-3.94,0.43,1.5,1.1,0.03,">1 nonsynonymous","T15E R179M S184N",3
"lib2","SARS-CoV-2","CAAACAAAGTATTTTA",3,23.29,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T15F L38Y T55E T63C Y93A N120Y",6
"lib2","SARS-CoV-2","CAAACAACACACAAAC",3,95.55,10.49,-0.35,0.03,2.97,1.03,0,">1 nonsynonymous","F62L T100S",2
"lib2","SARS-CoV-2","CAAACAACCCTTCCTG",1,5.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I28P",1
"lib2","SARS-CoV-2","CAAACAACTAATTGAG",2,11.92,10.13,-0.71,0.03,2.96,1.03,0,">1 nonsynonymous","S36Y F156M",2
"lib2","SARS-CoV-2","CAAACAACTAGTTCTG",5,53.24,6.41,-4.42,0.27,1.5,1.11,0.01,">1 nonsynonymous","P7V Y35R A105G G166S",4
"lib2","SARS-CoV-2","CAAACAACTATTATTC",4,26.58,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K94V V182K",2
"lib2","SARS-CoV-2","CAAACAACTCATATAT",1,27.85,10.76,-0.07,0.04,3,1.02,0,">1 nonsynonymous","A42M V153N",2
"lib2","SARS-CoV-2","CAAACAACTGAAACAT",9,37.32,9.15,-1.68,0.07,1.86,1.07,0,">1 nonsynonymous","N4V A81G T100V N120V S139G G152S",6
"lib2","SARS-CoV-2","CAAACAACTGATTTTC",2,23.38,9.35,-1.49,0.28,1.5,1,0.05,">1 nonsynonymous","L60S T85L Y91M V115L",4
"lib2","SARS-CoV-2","CAAACAAGACCAATGA",6,39.08,9.81,-1.03,0.06,2.97,1.05,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","CAAACAAGATTTTAAA",3,46.08,10.62,-0.21,0.07,2.98,1.03,0,">1 nonsynonymous","F44C T85V L122K",3
"lib2","SARS-CoV-2","CAAACAAGCCAGCAAA",2,12.37,10.05,-0.78,0.2,2.07,1.07,0,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","CAAACAAGCGCTTACG",20,450.92,11.09,0.25,0.04,2.94,1.06,0,">1 nonsynonymous","Y123K P197M",2
"lib2","SARS-CoV-2","CAAACAAGCGGATCTT",2,6.27,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","C6W C49T T63G P82W L183F",5
"lib2","SARS-CoV-2","CAAACAAGGATTATAA",2,12.67,9.63,-1.2,0.23,2.61,1.04,0.02,">1 nonsynonymous","N130S I138P I142H",3
"lib2","SARS-CoV-2","CAAACAAGGTACGGCA",11,157,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L60C G83H N118I F134G P149N G166T",6
"lib2","SARS-CoV-2","CAAACAAGTACGTCTT",6,35.59,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14M L60G Y121V Q144V K198E",5
"lib2","SARS-CoV-2","CAAACAAGTGGTACGA",8,0.45,NA,NA,NA,NA,NA,NA,"stop","T3S S36Q N64A A89* T140F",5
"lib2","SARS-CoV-2","CAAACAATGAATTAGC",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F Y91I V181S",3
"lib2","SARS-CoV-2","CAAACAATGCCTATTA",7,64.4,7.38,-3.46,0.18,1.5,1.09,0.01,">1 nonsynonymous","A67V A89D T201G",3
"lib2","SARS-CoV-2","CAAACAATGGTTATTG",1,23.99,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S41K G51I A89R",3
"lib2","SARS-CoV-2","CAAACAATTCACGAAG",6,48.88,6.38,-4.45,0.61,1.5,1.17,0.02,">1 nonsynonymous","D98K E135L Y175G V182L",4
"lib2","SARS-CoV-2","CAAACAATTCTCTTCC",2,2.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","CAAACAATTTGAAAAA",8,1.24,NA,NA,NA,NA,NA,NA,"stop","V52S D59S D75* Y119S",4
"lib2","SARS-CoV-2","CAAACACAAACATTCG",1,49.95,9.97,-0.87,0.07,2.83,1.07,0,"1 nonsynonymous","C31W",1
"lib2","SARS-CoV-2","CAAACACAACATTAAG",10,157.29,10.19,-0.64,0.04,2.76,1.07,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","CAAACACAACCTGAAT",5,117.21,10.03,-0.81,0.07,2.24,1.01,0,">1 nonsynonymous","V103T T148A",2
"lib2","SARS-CoV-2","CAAACACACATACTTG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","K94* D98Y I104C",3
"lib2","SARS-CoV-2","CAAACACACCCACCGA",2,5.3,10.33,-0.51,0.16,2.81,1,0.01,">1 nonsynonymous","C6V T15M",2
"lib2","SARS-CoV-2","CAAACACAGCACTCGT",5,94.45,9.67,-1.17,0.08,1.89,1.09,0,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","CAAACACAGTATAATG",7,0,NA,NA,NA,NA,NA,NA,"stop","A14D A18*",2
"lib2","SARS-CoV-2","CAAACACATGCTTGGT",5,109.38,10.49,-0.35,0.04,2.84,1.1,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","CAAACACATTTGATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","D68* K94L E135Y Q144I",4
"lib2","SARS-CoV-2","CAAACACCATGTCCCT",3,24.33,9.51,-1.32,0.1,1.99,1.02,0.01,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","CAAACACCCCTGAAAC",3,71.49,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14N R73P I80P T100L Y121V",5
"lib2","SARS-CoV-2","CAAACACCGCTATGTA",5,103.28,8.58,-2.25,0.06,2.46,1.04,0,">1 nonsynonymous","L122G Q176S A190V",3
"lib2","SARS-CoV-2","CAAACACCTATTCTGG",3,82.79,10.13,-0.71,0.09,2.26,1,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CAAACACGTATACCGT",6,39.99,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","K94L V173N Y178S",3
"lib2","SARS-CoV-2","CAAACACGTATTACCG",5,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P C61V A67H W106K T201N",5
"lib2","SARS-CoV-2","CAAACACTAAAACACG",9,89.47,10.65,-0.19,0.06,2.86,1.14,0,">1 nonsynonymous","N64I S129T",2
"lib2","SARS-CoV-2","CAAACACTAAAGGTAC",2,7.26,10.83,-0.01,0.24,2.79,1,0.02,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","CAAACACTAAGCCCTA",12,13.62,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9Q N13S S45R D97H G166N V182G",6
"lib2","SARS-CoV-2","CAAACACTATACCGAG",7,86.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I80M K94E F134Y",3
"lib2","SARS-CoV-2","CAAACACTCATTACTG",4,24.15,10.16,-0.68,0.23,2.62,1.01,0.02,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","CAAACACTCTAAACTA",5,33.71,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","L122K V180G",2
"lib2","SARS-CoV-2","CAAACACTTAACGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","N157* F167*",2
"lib2","SARS-CoV-2","CAAACACTTATGTTAC",2,10.84,10.86,0.02,0.08,2.93,1.1,0,"1 nonsynonymous","L131I",1
"lib2","SARS-CoV-2","CAAACACTTCCTTGCT",1,15.71,9.93,-0.91,0.09,3,1.02,0,">1 nonsynonymous","I2M E141A F156S",3
"lib2","SARS-CoV-2","CAAACAGAACTACAAA",5,47.96,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","D59C I88F S139T G152L F167W G174S",6
"lib2","SARS-CoV-2","CAAACAGACGGATCAA",2,1.84,NA,NA,NA,NA,NA,NA,"stop","Y21* S36T G86I G117V Q176L",5
"lib2","SARS-CoV-2","CAAACAGCAAAAACCA",10,128.41,10.82,-0.02,0.04,2.95,1.06,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","CAAACAGCAGCGTTAA",4,24.46,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","T3C D34N L38R L60S V65W F156P N171L",7
"lib2","SARS-CoV-2","CAAACAGCATAAAATA",2,46.55,9.57,-1.27,0.14,1.84,1.11,0.01,">1 nonsynonymous","G51I E141K",2
"lib2","SARS-CoV-2","CAAACAGCATGATCGT",2,11.21,6.07,-4.76,1.28,1.96,1.12,0.04,">1 nonsynonymous","F8T Y93S E135M H189S",4
"lib2","SARS-CoV-2","CAAACAGGAATGCACT",7,58.78,10.86,0.02,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACAGGCATATTGG",1,95.69,9.8,-1.04,0.08,1.87,1.03,0,">1 nonsynonymous","N24P Y39H",2
"lib2","SARS-CoV-2","CAAACAGTAATCTACC",9,56.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P96L W106N V180M",3
"lib2","SARS-CoV-2","CAAACAGTAATTAGAA",4,20.39,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T3N N24V P149V C158P F167D Y178L V180G",7
"lib2","SARS-CoV-2","CAAACAGTGCACTATT",17,297.23,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2R G86Y N109S F134Q",4
"lib2","SARS-CoV-2","CAAACAGTTAAGACAG",4,0.49,NA,NA,NA,NA,NA,NA,"stop","C6* N13P P161C",3
"lib2","SARS-CoV-2","CAAACATAACACATCC",1,36.94,9.63,-1.21,0.06,2.94,1.07,0,">1 nonsynonymous","G155S G174L",2
"lib2","SARS-CoV-2","CAAACATAAGTGATAT",1,48.33,10.88,0.05,0.09,2.94,1.08,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","CAAACATACATATATA",1,31.21,10.17,-0.66,0.07,2.63,1.09,0,">1 nonsynonymous","L5R L57K P149A",3
"lib2","SARS-CoV-2","CAAACATAGATAATTA",11,30.04,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G101D G166K",2
"lib2","SARS-CoV-2","CAAACATATCCAACAG",6,46.1,10.6,-0.24,0.13,2.7,1.05,0.01,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","CAAACATCATGCTTTC",2,46.04,9.98,-0.86,0.06,2.87,1.1,0,">1 nonsynonymous","S45A C61N G116V",3
"lib2","SARS-CoV-2","CAAACATCCAGAGCAA",2,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E P96H D98L L122P",4
"lib2","SARS-CoV-2","CAAACATGAGACTCCG",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R F99E V115G",3
"lib2","SARS-CoV-2","CAAACATGAGTTTACA",8,148.59,10.88,0.04,0.06,2.92,1.08,0,"1 nonsynonymous","Q163K",1
"lib2","SARS-CoV-2","CAAACATGCAATTCCC",3,19.8,10.49,-0.34,0.07,2.95,1.05,0,">1 nonsynonymous","A105S P149L",2
"lib2","SARS-CoV-2","CAAACATTAACCAGCA",5,66.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N58F Y93K S184V",3
"lib2","SARS-CoV-2","CAAACATTACGTAGCG",3,53.62,8.75,-2.09,0.27,1.5,1,0.04,"1 nonsynonymous","G101C",1
"lib2","SARS-CoV-2","CAAACATTCACAACAT",2,120.55,10.33,-0.51,0.03,2.92,1.07,0,">1 nonsynonymous","L5V T15D Y175F",3
"lib2","SARS-CoV-2","CAAACATTTAAAATCT",10,186.66,8.43,-2.41,0.1,2.41,1.16,0,">1 nonsynonymous","I80L K87E Y119N",3
"lib2","SARS-CoV-2","CAAACATTTTCAGGTC",4,1.03,NA,NA,NA,NA,NA,NA,"stop","D59V G146*",2
"lib2","SARS-CoV-2","CAAACCAACTTCCAAA",8,78,8.5,-2.33,0.08,2.14,1.03,0,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","CAAACCAAGAATTAAG",5,15.92,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","P82F",1
"lib2","SARS-CoV-2","CAAACCAATAGCGAGA",7,47.08,10.06,-0.77,0.05,2.86,1.04,0,">1 nonsynonymous","C6I S41N",2
"lib2","SARS-CoV-2","CAAACCAATATCAAAG",3,64.4,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F17E F70M D112R",3
"lib2","SARS-CoV-2","CAAACCAATGCGGACA",3,62.39,10.8,-0.03,0.06,3,1.01,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","CAAACCACCGGGCCAC",8,25.82,9.75,-1.08,0.17,1.87,1.02,0.01,">1 nonsynonymous","A18P F47D",2
"lib2","SARS-CoV-2","CAAACCAGAAGGAAAG",2,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S K56L D98L N120M",4
"lib2","SARS-CoV-2","CAAACCAGATACACGT",6,275.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K56E G86I Q176M",3
"lib2","SARS-CoV-2","CAAACCAGCTAAAACG",2,36.02,8.94,-1.9,0.06,2.85,1.04,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","CAAACCAGGAATGTTA",3,44.64,10.77,-0.06,0.07,2.97,1,0,"1 nonsynonymous","Y39K",1
"lib2","SARS-CoV-2","CAAACCAGGCGTCCCA",11,196.26,10.66,-0.17,0.05,2.91,1.07,0,"1 nonsynonymous","N30K",1
"lib2","SARS-CoV-2","CAAACCCAAAAGTCGG",3,11.27,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6Y S41P L60A D97L G152C",5
"lib2","SARS-CoV-2","CAAACCCACAAATTCT",2,12.47,10.91,0.07,0.09,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACCCAGCCGTGTC",10,69.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9K A81E F99L N107D E154S V173G",6
"lib2","SARS-CoV-2","CAAACCCATCCGTAGG",14,109.55,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V37S I72L I80T G86F",4
"lib2","SARS-CoV-2","CAAACCCATCGTACAT",2,7.53,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S69W P96Y",2
"lib2","SARS-CoV-2","CAAACCCCATTACCTA",7,40.4,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Q84F K87C P96W I104N L111S",5
"lib2","SARS-CoV-2","CAAACCCCGAATTTAA",3,29.77,8.86,-1.98,0.13,1.73,1.13,0.01,">1 nonsynonymous","G9Y T100Y D137V",3
"lib2","SARS-CoV-2","CAAACCCCGGCTATAA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R A105T E141I",3
"lib2","SARS-CoV-2","CAAACCCCTAGCATAT",6,37.07,8.65,-2.18,0.26,1.5,1,0.03,">1 nonsynonymous","A42M C49L F62S",3
"lib2","SARS-CoV-2","CAAACCCGAGTCTAAT",13,126.21,10.87,0.03,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACCCGATGACTGA",4,30.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y93G I104L",2
"lib2","SARS-CoV-2","CAAACCCGCATATAAT",2,65.71,10.61,-0.22,0.04,2.98,1,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","CAAACCCTACCACACC",2,20.82,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","V20K S41G N64C I80W R124L",5
"lib2","SARS-CoV-2","CAAACCCTATCGCGAG",4,31.85,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P96F V103C",2
"lib2","SARS-CoV-2","CAAACCCTTTTTCACA",5,67.35,10.86,0.03,0.06,2.95,1.07,0,"1 nonsynonymous","A190P",1
"lib2","SARS-CoV-2","CAAACCGACAAAAACC",5,0,NA,NA,NA,NA,NA,NA,"stop","A14Y K26S V115*",3
"lib2","SARS-CoV-2","CAAACCGACAACCGCT",9,83.42,10.87,0.04,0.05,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACCGACACAGCCG",16,110.77,7.46,-3.37,0.19,1.5,1.08,0.01,">1 nonsynonymous","L57V Y121R K198R",3
"lib2","SARS-CoV-2","CAAACCGACCCTCACA",10,172.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N24P A67L G86L Y119L S129T",5
"lib2","SARS-CoV-2","CAAACCGATTGCGTAC",8,119.26,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S69R D98N F160T R179M",4
"lib2","SARS-CoV-2","CAAACCGCAAAAGAAT",6,130.01,10.16,-0.68,0.07,2.49,1,0,">1 nonsynonymous","G51R V65R",2
"lib2","SARS-CoV-2","CAAACCGGAGCTATAA",12,116.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F62V P96I R127H G152S G174S",5
"lib2","SARS-CoV-2","CAAACCGGCATAAGCA",15,4.37,NA,NA,NA,NA,NA,NA,"stop","N64T V71Y T85* I138L N157R G174K",6
"lib2","SARS-CoV-2","CAAACCGGGATAGATC",4,67.29,9.62,-1.21,0.07,2.7,1.03,0,">1 nonsynonymous","F44I L162F",2
"lib2","SARS-CoV-2","CAAACCGTCCATCACG",10,155.45,9.31,-1.52,0.08,1.77,1.05,0,">1 nonsynonymous","L38T T100N T201N",3
"lib2","SARS-CoV-2","CAAACCTACGTAATTC",4,25.06,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y35C C61L A89V R136C",4
"lib2","SARS-CoV-2","CAAACCTACTTGACCG",8,74.55,10.01,-0.82,0.07,2.27,1.08,0,">1 nonsynonymous","W106L V153N",2
"lib2","SARS-CoV-2","CAAACCTACTTTTTCA",5,38.22,6,-4.84,2,3,1.13,0,"1 nonsynonymous","R124P",1
"lib2","SARS-CoV-2","CAAACCTAGATGGGAA",5,21.99,9.3,-1.54,0.23,1.5,1.03,0.03,">1 nonsynonymous","T3L Q84P",2
"lib2","SARS-CoV-2","CAAACCTAGTTCTTCA",11,227.79,9.64,-1.19,0.05,2.66,1.04,0,"1 nonsynonymous","R179K",1
"lib2","SARS-CoV-2","CAAACCTATATGCAAT",8,104.77,9.77,-1.06,0.1,2.15,1.02,0,">1 nonsynonymous","E10Y E135T",2
"lib2","SARS-CoV-2","CAAACCTATGATTAAT",8,75.3,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39H S41K F70I V103F R124M P161L",6
"lib2","SARS-CoV-2","CAAACCTCAGATGAAC",15,123.82,10.2,-0.64,0.06,2.35,1.04,0,"1 nonsynonymous","V182C",1
"lib2","SARS-CoV-2","CAAACCTCATTCTATC",1,14.8,10.85,0.01,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACCTGAAGCCAGA",1,31.57,10.9,0.06,0.07,2.94,1.07,0,">1 nonsynonymous","I104Y N110R",2
"lib2","SARS-CoV-2","CAAACCTTTGGTTTAT",5,73.51,6.54,-4.3,0.31,1.5,1.12,0.01,">1 nonsynonymous","I2Y A18S Q84H L95V R136D",5
"lib2","SARS-CoV-2","CAAACGAAAGTACAAG",3,10.67,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N1L N109D F167W",3
"lib2","SARS-CoV-2","CAAACGAACAATTGAC",3,14.6,6.59,-4.24,0.19,2.86,1.14,0.01,">1 nonsynonymous","G86Y N130G",2
"lib2","SARS-CoV-2","CAAACGAAGTGCCTCA",8,53.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61S R124P E141C T148F Y175S L187F",6
"lib2","SARS-CoV-2","CAAACGAAGTGTTTAC",1,29.32,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D112L P161S",2
"lib2","SARS-CoV-2","CAAACGAATCCACGCA",2,20.12,7.91,-2.93,0.32,1.87,1.14,0.04,">1 nonsynonymous","P96R A105W S147P",3
"lib2","SARS-CoV-2","CAAACGAATGAACTAA",6,46.98,9.43,-1.41,0.07,1.97,1.05,0,">1 nonsynonymous","R27T S41Q V52S N58Y",4
"lib2","SARS-CoV-2","CAAACGACAATTTAAT",9,249.21,10.23,-0.61,0.04,2.92,1.05,0,">1 nonsynonymous","Y39R Y121I",2
"lib2","SARS-CoV-2","CAAACGACAGGTGCAC",6,105.42,10.1,-0.74,0.07,2.64,1,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","CAAACGACCTAACCTA",4,12.11,7.18,-3.65,0.5,1.5,1.17,0.06,">1 nonsynonymous","L60G P82T K87F",3
"lib2","SARS-CoV-2","CAAACGACTACATAGG",3,28.35,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N64A Y93S N109S C158L",4
"lib2","SARS-CoV-2","CAAACGATATGACACT",4,48.78,10.9,0.06,0.07,2.97,1.06,0,">1 nonsynonymous","K128S V173L",2
"lib2","SARS-CoV-2","CAAACGATATTTACTC",9,1.14,NA,NA,NA,NA,NA,NA,"stop","C49R T55K D112*",3
"lib2","SARS-CoV-2","CAAACGCAAATATTAT",4,71.37,10.83,-0.01,0.05,2.96,1.07,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","CAAACGCCATAAACAC",5,82.99,10.73,-0.11,0.05,2.93,1.08,0,">1 nonsynonymous","T55L N110S",2
"lib2","SARS-CoV-2","CAAACGCCATATGTAA",4,77.72,10.09,-0.75,0.08,2.66,1.03,0,">1 nonsynonymous","T46F P133S",2
"lib2","SARS-CoV-2","CAAACGCCGCTAAATG",1,9.21,10.78,-0.06,0.07,3,1.03,0,"1 nonsynonymous","S36H",1
"lib2","SARS-CoV-2","CAAACGCGAACTTTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","CAAACGCGACAACAGT",2,10.31,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33D I88N S113E S164W",4
"lib2","SARS-CoV-2","CAAACGCGGTAGCACC",5,44.94,7.76,-3.08,0.29,1.5,1.21,0.02,"1 nonsynonymous","Y21R",1
"lib2","SARS-CoV-2","CAAACGCTAATCAAGA",11,90.93,6,-4.84,2,2.13,1.19,0,">1 nonsynonymous","F12R P96V S129C",3
"lib2","SARS-CoV-2","CAAACGCTAATGCAAT",9,126.63,10.06,-0.78,0.07,2.66,1.05,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","CAAACGCTACGAACGG",5,20.25,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D97T V103H",2
"lib2","SARS-CoV-2","CAAACGCTATAGTAGG",17,232.76,10.51,-0.33,0.03,2.94,1.04,0,">1 nonsynonymous","F8I P149L",2
"lib2","SARS-CoV-2","CAAACGCTCCCCCACA",6,76.32,9.9,-0.93,0.08,2.03,1.02,0,">1 nonsynonymous","D90I N151L",2
"lib2","SARS-CoV-2","CAAACGGATGGTGACA",19,211.19,10.61,-0.22,0.04,2.91,1.07,0,"1 nonsynonymous","F160I",1
"lib2","SARS-CoV-2","CAAACGGCGAGATCTG",11,169.95,10.84,0,0.06,2.9,1.1,0,">1 nonsynonymous","Y35L L122T",2
"lib2","SARS-CoV-2","CAAACGGCTAAGTGCC",8,292.67,10.12,-0.71,0.03,2.74,1.06,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","CAAACGGCTAATACAA",5,22.77,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9S G74T Q84F I104L",4
"lib2","SARS-CoV-2","CAAACGGGACAATTGA",2,32.15,10.74,-0.1,0.04,3,1.02,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","CAAACGGGGCTAAACC",2,9.18,10.74,-0.1,0.12,2.86,1.1,0,">1 nonsynonymous","C61I T140N",2
"lib2","SARS-CoV-2","CAAACGTAACGAGACC",5,1.07,NA,NA,NA,NA,NA,NA,"stop","T3C N118*",2
"lib2","SARS-CoV-2","CAAACGTCCTCAATAT",1,17.69,10.22,-0.61,0.14,2.56,1.02,0.01,">1 nonsynonymous","P7E A14V S41T",3
"lib2","SARS-CoV-2","CAAACGTGAAGATTCC",2,5.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D T170N",2
"lib2","SARS-CoV-2","CAAACGTGAGTAGCGA",11,76.95,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C6F R136T C150V Q168L",4
"lib2","SARS-CoV-2","CAAACGTGTTTAATAC",3,52.38,10.12,-0.72,0.06,2.88,1.05,0,">1 nonsynonymous","D98T L122Q G155F",3
"lib2","SARS-CoV-2","CAAACGTTGGCATACG",7,75.46,10.88,0.05,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACGTTTACCGATA",1,12.28,9.17,-1.66,0.19,2.24,1.06,0.01,">1 nonsynonymous","G9H A22Y S45I S129D",4
"lib2","SARS-CoV-2","CAAACTAAAAAACGTT",5,55.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60G A89S L122W K132I G172S",5
"lib2","SARS-CoV-2","CAAACTAAGCCGGGCA",6,51.99,6.21,-4.62,0.5,1.5,1.15,0.01,">1 nonsynonymous","N107I V173S",2
"lib2","SARS-CoV-2","CAAACTAAGCCGGTGG",1,17.78,6,-4.84,1.99,3,1.11,0.01,">1 nonsynonymous","N4V R16S K94S A105N P169S G174D",6
"lib2","SARS-CoV-2","CAAACTAATCACCAAT",1,68.87,8.52,-2.32,0.09,1.96,1.05,0,">1 nonsynonymous","S41T K56S W106L G166S",4
"lib2","SARS-CoV-2","CAAACTAATTTTTTTC",3,0.63,NA,NA,NA,NA,NA,NA,"stop","F8* Y39M I80G Y121*",4
"lib2","SARS-CoV-2","CAAACTACCAGAGCCC",7,74.88,7.92,-2.92,0.18,1.65,1.11,0.01,">1 nonsynonymous","L57E Y119Q E141Y",3
"lib2","SARS-CoV-2","CAAACTACTATACCAT",1,2.34,NA,NA,NA,NA,NA,NA,"stop","T3*",1
"lib2","SARS-CoV-2","CAAACTAGAACTTACA",2,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S F17L R136Y V173S A190L",5
"lib2","SARS-CoV-2","CAAACTAGATAACTGC",3,0.11,NA,NA,NA,NA,NA,NA,"stop","E10G C61* K128Q P149S",4
"lib2","SARS-CoV-2","CAAACTAGCATCCTTA",3,69.89,9.56,-1.27,0.09,2.66,1.04,0,">1 nonsynonymous","L57S G174L",2
"lib2","SARS-CoV-2","CAAACTAGGACGATGA",7,66.36,10.75,-0.09,0.1,2.74,1.26,0,"1 nonsynonymous","R16E",1
"lib2","SARS-CoV-2","CAAACTAGTTAATAAC",5,2.69,NA,NA,NA,NA,NA,NA,"stop","N4I F44V L95Y E141*",4
"lib2","SARS-CoV-2","CAAACTATAAAGATGA",1,13.93,10.1,-0.74,0.1,2.86,1,0.01,">1 nonsynonymous","P149I N151P",2
"lib2","SARS-CoV-2","CAAACTATAATTGACG",2,30.88,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A67Y E135Y P161N",3
"lib2","SARS-CoV-2","CAAACTATCATGATAG",7,0.09,NA,NA,NA,NA,NA,NA,"stop","F8S T85L P96L V182F T201*",5
"lib2","SARS-CoV-2","CAAACTATCCACTTAG",2,31.13,7.12,-3.72,0.43,1.5,1.08,0.04,">1 nonsynonymous","T46V A67F E76T N107T",4
"lib2","SARS-CoV-2","CAAACTATCTCACGCA",9,115.29,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39W Y66S G101Y Y119T Q144K",5
"lib2","SARS-CoV-2","CAAACTATGCCGAATC",4,56.55,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25F Y50E K94I L122Y",4
"lib2","SARS-CoV-2","CAAACTATTTATGACT",6,64.28,7.18,-3.66,0.35,1.5,1.16,0.03,">1 nonsynonymous","R27S Y66S K94L",3
"lib2","SARS-CoV-2","CAAACTCAAGCAACCA",10,110.78,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V71N F134G T170V",3
"lib2","SARS-CoV-2","CAAACTCACGTGCAGT",13,39.76,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C6F C31A C49G D97I",4
"lib2","SARS-CoV-2","CAAACTCACTCCAATG",1,31.37,10.36,-0.48,0.07,2.83,1.06,0,">1 nonsynonymous","Y35N F134G",2
"lib2","SARS-CoV-2","CAAACTCATCCATCCT",4,157.18,10.81,-0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAACTCCATCGTCAG",1,8.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11I Y21L G155V",3
"lib2","SARS-CoV-2","CAAACTCCCTCCAAAA",5,1.42,NA,NA,NA,NA,NA,NA,"stop","R16L R27P K87*",3
"lib2","SARS-CoV-2","CAAACTCCCTTTTCAT",6,90.88,6,-4.84,0.91,1.94,1.1,0,">1 nonsynonymous","A105Y R179M",2
"lib2","SARS-CoV-2","CAAACTCCGTCCCAAT",6,112.38,10.67,-0.17,0.03,2.98,1,0,">1 nonsynonymous","L60T S147I",2
"lib2","SARS-CoV-2","CAAACTCCGTGATCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40T T63L S69N T140*",4
"lib2","SARS-CoV-2","CAAACTCTACTTTTAA",1,32.51,10.76,-0.08,0.05,2.93,1.08,0,"1 nonsynonymous","T46L",1
"lib2","SARS-CoV-2","CAAACTCTAGAAATCT",6,37.2,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F8R K56I E76N Y93V",4
"lib2","SARS-CoV-2","CAAACTGAAACCTTAT",8,181.76,10.43,-0.41,0.04,2.92,1.03,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","CAAACTGAGTAAGCTA",6,71.42,9.34,-1.5,0.05,2.62,1.05,0,">1 nonsynonymous","G9S R16L S45N E141S T148L Q168N",6
"lib2","SARS-CoV-2","CAAACTGATTCCACAC",5,96.79,10.33,-0.5,0.03,2.87,1.06,0,"1 nonsynonymous","C49W",1
"lib2","SARS-CoV-2","CAAACTGGACGCCCGG",2,17.18,8.89,-1.95,0.29,1.5,1.1,0.04,">1 nonsynonymous","T15M I28T",2
"lib2","SARS-CoV-2","CAAACTGTAACTTTAT",3,38.84,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P7L D68P Y119E",3
"lib2","SARS-CoV-2","CAAACTGTACAAGACC",2,1.08,NA,NA,NA,NA,NA,NA,"stop","R16K G83K K87N Y121* I142H",5
"lib2","SARS-CoV-2","CAAACTGTTAAACATT",1,14.41,6,-4.84,2,3,1.03,0,">1 nonsynonymous","L60D A89S W106A S129V Y178S",5
"lib2","SARS-CoV-2","CAAACTGTTATATTTA",3,44.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S43E G83Y L95A A145S",4
"lib2","SARS-CoV-2","CAAACTTAGAATACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N64* S139D",2
"lib2","SARS-CoV-2","CAAACTTATACACAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* Y91* C102G S200T",4
"lib2","SARS-CoV-2","CAAACTTATATAAAAT",1,13.9,7.47,-3.36,0.5,1.5,1.14,0.08,">1 nonsynonymous","C61S D68L V103C",3
"lib2","SARS-CoV-2","CAAACTTCAGGGCTCA",7,140.87,9.87,-0.96,0.06,2.26,1.01,0,">1 nonsynonymous","S29T V77A",2
"lib2","SARS-CoV-2","CAAACTTCAGTAGGTG",2,32.42,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G9V C150G Y178C",3
"lib2","SARS-CoV-2","CAAACTTCTTCGCAAC",5,53.38,10.66,-0.18,0.05,2.87,1.09,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","CAAACTTGACGTACAC",2,9.65,10.11,-0.72,0.18,2.43,1,0.02,">1 nonsynonymous","L162R P191N",2
"lib2","SARS-CoV-2","CAAACTTGCAATAATC",2,0.7,NA,NA,NA,NA,NA,NA,"stop","A14E Y21* Y165* T170F Q176L",5
"lib2","SARS-CoV-2","CAAACTTGTTAGTTAC",5,54.9,8.41,-2.42,0.1,2.16,1.09,0,">1 nonsynonymous","D34G A42L N120P",3
"lib2","SARS-CoV-2","CAAACTTGTTCTCCTG",6,158.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48F R78Y Y119G Y143V",4
"lib2","SARS-CoV-2","CAAACTTTACTACCAA",1,9.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N30Y P96S F99L",3
"lib2","SARS-CoV-2","CAAAGAAAAATAAAGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118A",1
"lib2","SARS-CoV-2","CAAAGAAAATAAAAAA",13,64.04,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D59R P82L K94M",3
"lib2","SARS-CoV-2","CAAAGAAACCTATTGT",1,7.7,10.29,-0.55,0.17,2.44,1.09,0.01,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","CAAAGAAACTAATACT",1,12.25,8.97,-1.87,0.17,2.76,1.14,0.01,"1 nonsynonymous","Y143C",1
"lib2","SARS-CoV-2","CAAAGAAAGCCCGATT",1,13.88,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","P7E Y93H",2
"lib2","SARS-CoV-2","CAAAGAAATTTAAAAT",4,2.67,NA,NA,NA,NA,NA,NA,"stop","S41Y A81K I88* S113L",4
"lib2","SARS-CoV-2","CAAAGAACACAGATTG",2,0.58,NA,NA,NA,NA,NA,NA,"stop","K132*",1
"lib2","SARS-CoV-2","CAAAGAACCAAAGTTT",1,7.38,8.79,-2.04,0.23,2.05,1.16,0.01,">1 nonsynonymous","A33R A145C",2
"lib2","SARS-CoV-2","CAAAGAACCAAGACCA",2,10.53,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D90P F99P",2
"lib2","SARS-CoV-2","CAAAGAACCCAACAAT",2,16.36,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V77K N92T",2
"lib2","SARS-CoV-2","CAAAGAACGAATATTT",7,71.22,8.64,-2.2,0.08,2.09,1.04,0,">1 nonsynonymous","W23P Y119R",2
"lib2","SARS-CoV-2","CAAAGAACTCATCTTC",2,1.05,NA,NA,NA,NA,NA,NA,"stop","T46I G51V N130P T170*",4
"lib2","SARS-CoV-2","CAAAGAAGCACTGCAG",1,21.98,10.74,-0.09,0.09,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGAAGGCATACGG",5,2.98,NA,NA,NA,NA,NA,NA,"stop","Y35M S69M G83* C158V T170A",5
"lib2","SARS-CoV-2","CAAAGAATAAACGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3I V32G N40* I88E F134S P149T L162S",7
"lib2","SARS-CoV-2","CAAAGAATAATAACAA",1,70.2,10.74,-0.1,0.03,2.95,1.03,0,">1 nonsynonymous","V37P P54L E141G",3
"lib2","SARS-CoV-2","CAAAGAATCCCTATAC",10,127.43,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A18R F44I G86C T100S N107L T148L G166A",7
"lib2","SARS-CoV-2","CAAAGAATGTGTGACG",1,72.72,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","E10H Y50A T100N G146P H189S",5
"lib2","SARS-CoV-2","CAAAGAATGTTAACTT",10,18.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34F A42H T100S D112G R127S Y178T",6
"lib2","SARS-CoV-2","CAAAGAATTAGGACGC",2,30.43,8.65,-2.19,0.41,1.5,1,0.07,">1 nonsynonymous","S19T W23F P54S",3
"lib2","SARS-CoV-2","CAAAGACAAAATACTA",4,57.62,10.78,-0.06,0.05,2.94,1.06,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","CAAAGACAAACAGTAT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","W23* Y91G",2
"lib2","SARS-CoV-2","CAAAGACAGAAAAAAA",1,34.3,6.15,-4.68,0.51,1.5,1.11,0.01,">1 nonsynonymous","N107C P149F N157M",3
"lib2","SARS-CoV-2","CAAAGACAGATGGCTA",3,1.55,NA,NA,NA,NA,NA,NA,"stop","I28L S45P K87* A105Y G117F F126I",6
"lib2","SARS-CoV-2","CAAAGACATTCAACAT",3,28.37,10.48,-0.36,0.05,2.99,1,0,">1 nonsynonymous","L5R Y21W N110Q",3
"lib2","SARS-CoV-2","CAAAGACATTTGTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M G9W L162P",3
"lib2","SARS-CoV-2","CAAAGACCAAAGTTAA",2,6.09,10.8,-0.03,0.11,2.82,1.19,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CAAAGACCAAATTACA",8,78.86,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S69L G117R",2
"lib2","SARS-CoV-2","CAAAGACCATAAATTT",9,91.35,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14N K48Q P96R A105F H189P",5
"lib2","SARS-CoV-2","CAAAGACCCTGTATTG",13,1.39,NA,NA,NA,NA,NA,NA,"stop","N4Q C49H L60T A81* N120S L162F",6
"lib2","SARS-CoV-2","CAAAGACCGTTGGTTG",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E L60H V103T G152S",4
"lib2","SARS-CoV-2","CAAAGACCTCGCACGC",4,107.14,10.72,-0.11,0.04,2.95,1.05,0,">1 nonsynonymous","P7T F44W",2
"lib2","SARS-CoV-2","CAAAGACGAAAACTTG",2,25.68,8.42,-2.41,0.29,2.15,1.08,0.03,">1 nonsynonymous","N64A R73W",2
"lib2","SARS-CoV-2","CAAAGACGAAAGGACC",5,33.9,6,-4.84,2,3,1.25,0,">1 nonsynonymous","L38Q L95N",2
"lib2","SARS-CoV-2","CAAAGACGACCTATGG",11,223.69,10.11,-0.72,0.06,2.58,1.02,0,">1 nonsynonymous","P96G P149F",2
"lib2","SARS-CoV-2","CAAAGACGATTCCTTA",2,61.74,6,-4.84,1.31,1.5,1.16,0.01,"1 nonsynonymous","C158F",1
"lib2","SARS-CoV-2","CAAAGACGCCAGTATC",8,174.5,10.17,-0.67,0.06,2.8,1.03,0,">1 nonsynonymous","S41V K132D F160E",3
"lib2","SARS-CoV-2","CAAAGACGGAAAATCA",6,111.34,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119E Y143N T148P",3
"lib2","SARS-CoV-2","CAAAGACGGTGACAAC",16,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N F47R F126N L162K",4
"lib2","SARS-CoV-2","CAAAGACGTGGCTGCA",12,151.69,10.75,-0.08,0.05,2.91,1.1,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","CAAAGACGTTCTTTGG",6,64.62,8.03,-2.8,0.13,1.83,1.04,0.01,">1 nonsynonymous","R78M A89S Y119K I138W",4
"lib2","SARS-CoV-2","CAAAGACTACCATATG",5,46.47,10.7,-0.14,0.03,2.98,1.04,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","CAAAGACTGAATAATA",5,77.46,8.12,-2.72,0.09,2.3,1.08,0,">1 nonsynonymous","T55E C61S S113P",3
"lib2","SARS-CoV-2","CAAAGACTGCGTCTAC",2,70.89,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37C Y93T",2
"lib2","SARS-CoV-2","CAAAGACTTTAATCAA",1,16.34,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81V K87N Y143R P169N",4
"lib2","SARS-CoV-2","CAAAGAGAAATTAGTG",2,20.2,8.66,-2.18,0.23,1.5,1.21,0.02,">1 nonsynonymous","Y35P V71M",2
"lib2","SARS-CoV-2","CAAAGAGGTCTCAAGG",2,25.62,10.23,-0.61,0.07,2.83,1.06,0,"1 nonsynonymous","N13M",1
"lib2","SARS-CoV-2","CAAAGATAAACCATTT",15,0.04,NA,NA,NA,NA,NA,NA,"stop","Y35H Q84* D112H",3
"lib2","SARS-CoV-2","CAAAGATACACGGTAA",2,51.16,10.51,-0.33,0.04,2.93,1.08,0,"1 nonsynonymous","S43N",1
"lib2","SARS-CoV-2","CAAAGATACCCTAACC",2,73.7,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2N G86L D98T D112F",4
"lib2","SARS-CoV-2","CAAAGATACTTTAGTC",10,102.81,10.22,-0.62,0.02,2.92,1.05,0,">1 nonsynonymous","K114S E141W",2
"lib2","SARS-CoV-2","CAAAGATATAAGGAAT",3,24.06,10.2,-0.64,0.1,2.51,1,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","CAAAGATATAATATAT",1,0.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","CAAAGATATAGATGGG",1,20.55,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","T63S G86V N130M E135R",4
"lib2","SARS-CoV-2","CAAAGATGACTAACAT",3,50.04,10.77,-0.06,0.03,3,1.03,0,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","CAAAGATTAAATATAC",6,139.11,10.24,-0.6,0.04,2.67,1.08,0,">1 nonsynonymous","V71L G83F T148K",3
"lib2","SARS-CoV-2","CAAAGATTGACTCAAA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","P149L V173*",2
"lib2","SARS-CoV-2","CAAAGATTGCAATAAT",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T A42L K114H Y123D I142W",5
"lib2","SARS-CoV-2","CAAAGATTGCTCATTG",8,77.82,6,-4.84,2,3,1.12,0,"1 nonsynonymous","R124F",1
"lib2","SARS-CoV-2","CAAAGATTGGGTGGGA",5,80.1,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","P54A P82I V173Q Q176M",4
"lib2","SARS-CoV-2","CAAAGATTTGGGATAT",3,48.88,10.69,-0.14,0.04,3,1.02,0,">1 nonsynonymous","Q84I S164N",2
"lib2","SARS-CoV-2","CAAAGCAAATCTATGC",10,159.16,10.85,0.01,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGCAACAGGCATT",9,3.83,NA,NA,NA,NA,NA,NA,"stop","V20T S41H C49V Y175*",4
"lib2","SARS-CoV-2","CAAAGCAACCAATCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* K48P L60K G146C F156Y",5
"lib2","SARS-CoV-2","CAAAGCAACGCTGTGA",8,173.77,10.03,-0.8,0.04,2.8,1.02,0,">1 nonsynonymous","D59P Y121F",2
"lib2","SARS-CoV-2","CAAAGCACAACCCGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4K F47I N110M E141M Q168D R179*",6
"lib2","SARS-CoV-2","CAAAGCACATAGAAAT",4,42.74,9.5,-1.33,0.13,1.98,1.1,0.01,">1 nonsynonymous","E10M F17V",2
"lib2","SARS-CoV-2","CAAAGCACCCTACATA",3,0.47,NA,NA,NA,NA,NA,NA,"stop","E135K C195*",2
"lib2","SARS-CoV-2","CAAAGCACCGGTCTGC",6,140.06,10.11,-0.72,0.07,2.47,1.01,0,"1 nonsynonymous","V103T",1
"lib2","SARS-CoV-2","CAAAGCACTCGAGCCG",9,209.76,8.58,-2.26,0.09,2.87,1.07,0,">1 nonsynonymous","N110C Y119M S184C",3
"lib2","SARS-CoV-2","CAAAGCAGAAATATCC",6,32.1,10.47,-0.37,0.04,2.93,1.06,0,">1 nonsynonymous","A18E E141S",2
"lib2","SARS-CoV-2","CAAAGCAGATAAACGA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R S19Q R27A Y35H D59T",5
"lib2","SARS-CoV-2","CAAAGCAGGAGTTTAC",1,5.19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54N F99R S129T C158M Y165E",5
"lib2","SARS-CoV-2","CAAAGCAGTATAGACC",10,79.38,10.12,-0.72,0.06,2.64,1,0,">1 nonsynonymous","T55L D90I",2
"lib2","SARS-CoV-2","CAAAGCATAACTAAAA",11,15.92,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib2","SARS-CoV-2","CAAAGCATATAAATAT",2,20.29,10.91,0.08,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGCATCCTTCGAA",6,49.14,9.28,-1.56,0.12,2.34,1.01,0,">1 nonsynonymous","A14V Y143M",2
"lib2","SARS-CoV-2","CAAAGCATTAAAATTA",10,116.27,8.21,-2.63,0.13,1.95,1.04,0.01,">1 nonsynonymous","R25H G146K",2
"lib2","SARS-CoV-2","CAAAGCATTTCACATG",7,77.04,7.91,-2.93,0.34,1.5,1.04,0.03,">1 nonsynonymous","L5E A18R Q84L K87N Y121Q",5
"lib2","SARS-CoV-2","CAAAGCCAAGTATCAG",3,48.11,10.54,-0.29,0.08,2.88,1.12,0,">1 nonsynonymous","D90A L95I",2
"lib2","SARS-CoV-2","CAAAGCCCAGCGTAGA",4,2.24,NA,NA,NA,NA,NA,NA,"stop","L95Q Y121F C158* H189R",4
"lib2","SARS-CoV-2","CAAAGCCCCAGACTAA",9,95.07,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L5T R27E R73T D90T Y165G",5
"lib2","SARS-CoV-2","CAAAGCCCCGCAAACA",7,28.84,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C31S F167H",2
"lib2","SARS-CoV-2","CAAAGCCCCTGACTGG",8,87.53,9.06,-1.78,0.15,1.55,1.13,0.01,">1 nonsynonymous","K56A D97C A105F",3
"lib2","SARS-CoV-2","CAAAGCCGATCTATTA",1,27.82,10.64,-0.19,0.07,2.93,1.06,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","CAAAGCGATAAAACAC",9,71.58,8.62,-2.22,0.08,3,1.02,0,">1 nonsynonymous","C61S Y91L N157G",3
"lib2","SARS-CoV-2","CAAAGCGATAATCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","G152T P169*",2
"lib2","SARS-CoV-2","CAAAGCGCTTTTCGAA",5,58.12,10.88,0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGCGTAATATTCC",2,31.04,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6A C49G T55H G86Y N157E",5
"lib2","SARS-CoV-2","CAAAGCTATGATACAG",11,101.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6F R124F",2
"lib2","SARS-CoV-2","CAAAGCTCCCAACTCG",3,14.26,7.49,-3.35,0.34,1.5,1.04,0.05,">1 nonsynonymous","C61N D98V G146L S184C",4
"lib2","SARS-CoV-2","CAAAGCTCTTAGAGGT",4,1.3,NA,NA,NA,NA,NA,NA,"stop","A18* S45L K56S",3
"lib2","SARS-CoV-2","CAAAGCTGGACTTCTA",10,7.12,NA,NA,NA,NA,NA,NA,"stop","I2M S41* C195F",3
"lib2","SARS-CoV-2","CAAAGCTTAGATTTAG",3,44.77,10.09,-0.75,0.05,2.92,1.06,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","CAAAGGAAACGCGCAA",11,132,10.82,-0.02,0.03,3,1.01,0,"1 nonsynonymous","T148V",1
"lib2","SARS-CoV-2","CAAAGGAACCTTCCAC",1,9.69,9.93,-0.91,0.12,2.93,1.01,0.01,">1 nonsynonymous","I28L S43N V52S N64Q",4
"lib2","SARS-CoV-2","CAAAGGAAGCCAAAAA",4,8.44,NA,NA,NA,NA,NA,NA,"stop","P7I W23* A33H G152N Y175T",5
"lib2","SARS-CoV-2","CAAAGGACTGGTCCAT",3,102.39,10.87,0.03,0.07,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGGAGCCGCTGAA",2,18.69,6.09,-4.74,0.78,1.5,1.15,0.02,">1 nonsynonymous","Y119I E141G C158L",3
"lib2","SARS-CoV-2","CAAAGGATTAGCAAAA",8,97.77,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N107F G116F F160N",3
"lib2","SARS-CoV-2","CAAAGGATTTCGATTG",2,37.38,9.11,-1.72,0.11,2.83,1.12,0.01,">1 nonsynonymous","A42G S113G F160R Q168N",4
"lib2","SARS-CoV-2","CAAAGGCACACACCAT",2,48.92,6.01,-4.82,0.92,1.5,1.15,0.01,">1 nonsynonymous","N40D G51C R73A T85Q",4
"lib2","SARS-CoV-2","CAAAGGCACTACTAGA",9,234.13,10.73,-0.1,0.04,2.9,1.11,0,">1 nonsynonymous","T55L V115Q T201E",3
"lib2","SARS-CoV-2","CAAAGGCACTCTAAAG",1,0.39,NA,NA,NA,NA,NA,NA,"stop","W23I F62P N92* R127A F160T",5
"lib2","SARS-CoV-2","CAAAGGCAGTTAACCC",4,18.54,6.38,-4.45,0.54,1.5,1.17,0.02,">1 nonsynonymous","D59Y P96F",2
"lib2","SARS-CoV-2","CAAAGGCATCAGCGTA",1,6.87,9.43,-1.4,0.41,1.5,1,0.05,">1 nonsynonymous","C6T D112I E141N",3
"lib2","SARS-CoV-2","CAAAGGCGATACCAGA",3,29.22,6.42,-4.41,0.39,1.5,1.1,0.01,">1 nonsynonymous","N4K I28G C150T",3
"lib2","SARS-CoV-2","CAAAGGGATGCAAAGT",6,56.1,10.44,-0.4,0.03,2.91,1.11,0,">1 nonsynonymous","V11I V71T S129V",3
"lib2","SARS-CoV-2","CAAAGGTAAAATGGGG",3,79.54,10,-0.83,0.07,2.35,1.05,0,">1 nonsynonymous","A105Y P133A T201A",3
"lib2","SARS-CoV-2","CAAAGGTAAGCCGAAA",4,67.78,10.87,0.03,0.06,2.94,1.07,0,">1 nonsynonymous","S43Q T140S",2
"lib2","SARS-CoV-2","CAAAGGTACATTTAAA",3,44.8,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C49S K56Q K87E F99A Y123L D137P Y175V",7
"lib2","SARS-CoV-2","CAAAGGTGAGGTTATT",7,174.72,10.81,-0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGGTGCACAAGTC",6,39.77,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8T A89Q L131Q S164K",4
"lib2","SARS-CoV-2","CAAAGGTGGCACACGT",3,1.96,NA,NA,NA,NA,NA,NA,"stop","V37R K114F N130*",3
"lib2","SARS-CoV-2","CAAAGGTGTACCCACT",3,36.46,10.68,-0.16,0.05,2.94,1.05,0,">1 nonsynonymous","L5Y T15N A33W T85R P149K",5
"lib2","SARS-CoV-2","CAAAGGTTACAAGCTA",2,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R D97S W106L S113F G174K",5
"lib2","SARS-CoV-2","CAAAGGTTTAAAACAT",8,50.94,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T63S P82K D98S K132F",4
"lib2","SARS-CoV-2","CAAAGGTTTGCTCCAC",10,236.68,9.27,-1.57,0.04,2.8,1.08,0,">1 nonsynonymous","D97H G146Q",2
"lib2","SARS-CoV-2","CAAAGGTTTGTCCTAA",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C S41N I142F",3
"lib2","SARS-CoV-2","CAAAGTAAACCTGGAA",7,86.04,9.82,-1.01,0.07,2.12,1.02,0,">1 nonsynonymous","F44A L60K N110P",3
"lib2","SARS-CoV-2","CAAAGTAAACGTTATG",6,53.95,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N58I A81L R136M I142M",4
"lib2","SARS-CoV-2","CAAAGTAAACTTTGAC",7,36.27,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A81T I104R",2
"lib2","SARS-CoV-2","CAAAGTAACTGAGACC",1,60.03,10.24,-0.6,0.05,2.76,1.01,0,">1 nonsynonymous","A81E S129W",2
"lib2","SARS-CoV-2","CAAAGTACACCGCAGT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","S36G L60* T201R",3
"lib2","SARS-CoV-2","CAAAGTACCAACCTAG",8,48.61,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V20M I104S R136P Y178T",4
"lib2","SARS-CoV-2","CAAAGTAGCAAATGAA",9,39.94,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","Y35N A67Y G174P R179N T201L",5
"lib2","SARS-CoV-2","CAAAGTAGTTATATAC",1,33.6,10.88,0.04,0.07,2.93,1.1,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","CAAAGTATCTTATTCC",1,81.9,10.75,-0.09,0.04,2.95,1.07,0,">1 nonsynonymous","L131V T201C",2
"lib2","SARS-CoV-2","CAAAGTATTAAGTGAA",2,21.03,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","K94P F185C",2
"lib2","SARS-CoV-2","CAAAGTATTCTATGCA",6,173.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86S K94T C102Y Y119D T140P",5
"lib2","SARS-CoV-2","CAAAGTATTTTGTACA",2,78.77,10.79,-0.05,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAAGTCAATTCTGAC",2,20.57,6.61,-4.22,0.57,1.5,1.23,0.05,">1 nonsynonymous","G86A P169K G196N",3
"lib2","SARS-CoV-2","CAAAGTCACAAAATAT",5,31.56,10.58,-0.25,0.11,2.73,1.29,0.01,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","CAAAGTCACAGAATTC",7,61.07,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G101L S200L",2
"lib2","SARS-CoV-2","CAAAGTCACTTAAGTG",2,12.24,9.35,-1.49,0.19,1.79,1.15,0.02,">1 nonsynonymous","D98A I104S",2
"lib2","SARS-CoV-2","CAAAGTCCAGGTACCA",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CAAAGTCGAGACTAAT",2,26.35,8.01,-2.83,0.28,1.5,1,0.03,"1 nonsynonymous","R25P",1
"lib2","SARS-CoV-2","CAAAGTCTAAGTATGG",10,26.56,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D97C W106N Y121S",3
"lib2","SARS-CoV-2","CAAAGTCTCCCGAACA",2,62.78,10.56,-0.27,0.06,2.93,1,0,">1 nonsynonymous","L5K Y66E V153I P197A",4
"lib2","SARS-CoV-2","CAAAGTCTCCGAAACT",4,54.04,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L5P P96L Y119I",3
"lib2","SARS-CoV-2","CAAAGTCTTAGTTATA",1,19,10.8,-0.03,0.05,3,1.02,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","CAAAGTGAACCAGCAA",5,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S P54Q G83N",3
"lib2","SARS-CoV-2","CAAAGTGACCACTACT",3,27.51,10.73,-0.1,0.05,2.98,1.03,0,"1 nonsynonymous","Y66N",1
"lib2","SARS-CoV-2","CAAAGTGACCGACTGG",2,17.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19L A81T",2
"lib2","SARS-CoV-2","CAAAGTGAGGATATTA",3,48.09,8.24,-2.59,0.09,2.53,1.03,0,">1 nonsynonymous","D90E N109Q F156R P169L",4
"lib2","SARS-CoV-2","CAAAGTGATGCGCCCA",2,18.98,10.69,-0.15,0.03,2.89,1.11,0,">1 nonsynonymous","C61E D90Y L122A",3
"lib2","SARS-CoV-2","CAAAGTGTGCACCACT",7,129.56,10.59,-0.24,0.04,2.99,1.01,0,">1 nonsynonymous","D97A A105S",2
"lib2","SARS-CoV-2","CAAAGTGTTATGCGAG",7,51.79,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T3W R73L G117A",3
"lib2","SARS-CoV-2","CAAAGTTAATCGAAAA",8,44.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C49H T63V D90A G116L L187S",5
"lib2","SARS-CoV-2","CAAAGTTACCACACAA",3,312.67,10.88,0.04,0.05,2.98,1.04,0,"1 nonsynonymous","I104F",1
"lib2","SARS-CoV-2","CAAAGTTCAAACAACG",4,71.44,6,-4.84,1.37,3,1.17,0,">1 nonsynonymous","S45E D59S D68K P82Y A89S E141T G155R",7
"lib2","SARS-CoV-2","CAAAGTTCACTGTACC",4,43.89,10.84,0,0.06,3,1.01,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CAAAGTTCAGAACAAT",4,20.28,6.04,-4.8,1.01,3,1.32,0.02,">1 nonsynonymous","S29R D98S E135P N151M",4
"lib2","SARS-CoV-2","CAAAGTTGATATCCGA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66H P96C V153K",3
"lib2","SARS-CoV-2","CAAAGTTGGAAATAGT",8,76.43,6,-4.84,2,1.5,1.11,0,"1 nonsynonymous","P177F",1
"lib2","SARS-CoV-2","CAAAGTTGGTTATGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D97S N110* P133Q S147F V181P",5
"lib2","SARS-CoV-2","CAAAGTTTAAATATAA",4,72.72,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S45L G83E Q176W",3
"lib2","SARS-CoV-2","CAAAGTTTATTACTAA",1,13.79,10,-0.84,0.16,2.73,1.06,0.01,">1 nonsynonymous","R127G T148D F160Y",3
"lib2","SARS-CoV-2","CAAAGTTTCAACGACA",10,50.67,6,-4.84,2,3,1.22,0,">1 nonsynonymous","N4F G101D",2
"lib2","SARS-CoV-2","CAAAGTTTCCTCTGCT",8,293.62,10.13,-0.71,0.05,2.73,1,0,">1 nonsynonymous","N4V A14M",2
"lib2","SARS-CoV-2","CAAAGTTTTTCATACA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","N4* D97Q",2
"lib2","SARS-CoV-2","CAAATAAAAAAAGATA",4,56.3,8.96,-1.87,0.12,1.69,1.11,0.01,">1 nonsynonymous","Y21E N30D",2
"lib2","SARS-CoV-2","CAAATAAAACATTTAA",1,35.41,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V77E D90T P177S",3
"lib2","SARS-CoV-2","CAAATAAAATACCACA",1,43.09,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N24L I88K D98S L122M K199L",5
"lib2","SARS-CoV-2","CAAATAAACAAGTACC",8,85.65,10.85,0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATAAACTGGAACA",2,19.38,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L5R K26T L60R D112C",4
"lib2","SARS-CoV-2","CAAATAAACTGGCGAA",6,12.43,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8N F17L P149M",3
"lib2","SARS-CoV-2","CAAATAAACTGGTGAA",8,184.38,10.82,-0.01,0.06,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATAAAGCGCATCC",8,111.14,9.04,-1.79,0.06,2.95,1.09,0,">1 nonsynonymous","L125R L187Q",2
"lib2","SARS-CoV-2","CAAATAAATGAGGCCA",8,188.8,10.44,-0.39,0.03,2.92,1.05,0,">1 nonsynonymous","S129M T140H N151M",3
"lib2","SARS-CoV-2","CAAATAAATTAACCAG",2,12.77,6.11,-4.72,1.05,1.5,1.15,0.02,">1 nonsynonymous","G86S D97F E141L G146I C195F",5
"lib2","SARS-CoV-2","CAAATAACACCAATGG",5,30.21,6.24,-4.59,0.69,1.5,1.1,0.02,">1 nonsynonymous","C61R I88F",2
"lib2","SARS-CoV-2","CAAATAACAGAAAACT",1,6.93,8.29,-2.55,0.33,2.28,1.05,0.05,">1 nonsynonymous","G83R F167M",2
"lib2","SARS-CoV-2","CAAATAACGGCAGAGT",7,74.09,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2T R27G D90M F99L Y119L Y165G",6
"lib2","SARS-CoV-2","CAAATAACGGGTAAGA",7,153.42,9.37,-1.47,0.07,1.99,1.09,0,">1 nonsynonymous","F12I C61D V173S",3
"lib2","SARS-CoV-2","CAAATAACTAGTTTTA",9,87.11,6,-4.84,2,3,1.22,0,">1 nonsynonymous","E10V W106S E135V",3
"lib2","SARS-CoV-2","CAAATAACTCTGAGTG",8,69.25,6.8,-4.04,0.24,1.5,1.12,0.01,">1 nonsynonymous","T55S D97C L111E S139N N157T",5
"lib2","SARS-CoV-2","CAAATAACTGAACCAC",4,23.75,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","P96S C158Y",2
"lib2","SARS-CoV-2","CAAATAACTGAATAAA",9,33.21,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","T3Y V11H N40V P177A",4
"lib2","SARS-CoV-2","CAAATAAGACTATTCA",6,8.04,NA,NA,NA,NA,NA,NA,"stop","N13L N64S Y93L N107A P133* T140L G146V",7
"lib2","SARS-CoV-2","CAAATAAGACTGATTG",6,13.32,6,-4.84,2,1.56,1.17,0.01,">1 nonsynonymous","N13T S29A D68R Y91E R179W A192T",6
"lib2","SARS-CoV-2","CAAATAAGAGTCTCAA",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V115P L183D",2
"lib2","SARS-CoV-2","CAAATAAGGCAGCAAT",4,29.32,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6S L95N",2
"lib2","SARS-CoV-2","CAAATAAGTACGTGCT",1,13.02,6.01,-4.83,0.92,1.5,1.14,0.02,">1 nonsynonymous","C61S R73N K94S G101L S200V",5
"lib2","SARS-CoV-2","CAAATAATAAGCTCCA",21,226.9,10.22,-0.61,0.03,2.92,1.04,0,">1 nonsynonymous","I2W V11M T63S S184T S200T",5
"lib2","SARS-CoV-2","CAAATAATAGAATTAA",3,133.87,10.31,-0.52,0.03,2.87,1.06,0,">1 nonsynonymous","T15E T55S F134A",3
"lib2","SARS-CoV-2","CAAATAATCGACTCAA",18,241.38,10.88,0.05,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATAATGACACTTA",2,76.42,9.93,-0.9,0.05,2.66,1.05,0,">1 nonsynonymous","S19M V37K",2
"lib2","SARS-CoV-2","CAAATAATTAAGATTC",6,124.68,8.37,-2.46,0.1,2.8,1.04,0,">1 nonsynonymous","P96D N157E",2
"lib2","SARS-CoV-2","CAAATACAAGAGATTA",2,56.72,9.84,-1,0.06,2.69,1.08,0,">1 nonsynonymous","C6I C61H S164Y",3
"lib2","SARS-CoV-2","CAAATACAAGAGTGCG",1,0.95,NA,NA,NA,NA,NA,NA,"stop","Y50R R73*",2
"lib2","SARS-CoV-2","CAAATACAATAAAGTG",4,104.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K132P Q176F",2
"lib2","SARS-CoV-2","CAAATACACAAGATCT",3,20.75,9.6,-1.23,0.1,2.05,1.12,0.01,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","CAAATACACATGCAGA",5,61.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P54E F99N K128P Q168F",4
"lib2","SARS-CoV-2","CAAATACAGATGTCGG",3,41.71,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A14L T85E G146W E186P K198R",5
"lib2","SARS-CoV-2","CAAATACATAGGCTAT",2,41.85,9.91,-0.93,0.07,2.86,1.04,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","CAAATACCATTCCAAT",4,28.73,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T15R V115M E141L G172V K198N",5
"lib2","SARS-CoV-2","CAAATACCCCAATTCA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","G83* L95P N107P Y119I V173D",5
"lib2","SARS-CoV-2","CAAATACCCGACGTAG",2,62.14,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3S A14V S19Q R78A G146P T193L",6
"lib2","SARS-CoV-2","CAAATACTACCAGGAA",3,72.52,10.58,-0.25,0.07,2.93,1.05,0,">1 nonsynonymous","N1L G9H R27S T55K",4
"lib2","SARS-CoV-2","CAAATACTCAATGCGA",10,124.6,10.28,-0.56,0.03,2.82,1.06,0,"1 nonsynonymous","F167Y",1
"lib2","SARS-CoV-2","CAAATACTTAGACAAA",4,80.87,9.73,-1.11,0.1,2.29,1.07,0,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","CAAATACTTAGCCGGT",11,164.35,10.77,-0.06,0.05,2.81,1.11,0,">1 nonsynonymous","S53L T201P",2
"lib2","SARS-CoV-2","CAAATACTTTTGTACG",2,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S A22R P96M L125H Y143S T170R",6
"lib2","SARS-CoV-2","CAAATAGAACCAAATA",9,89.25,6,-4.84,0.73,1.5,1.14,0,">1 nonsynonymous","R25L L95Q W106E G116A R127V",5
"lib2","SARS-CoV-2","CAAATAGACATGAAGG",4,29.68,NA,NA,NA,NA,NA,NA,"stop","R16S Y50K D98*",3
"lib2","SARS-CoV-2","CAAATAGACCACAAAC",3,110.7,8.8,-2.04,0.07,2.4,1.08,0,">1 nonsynonymous","S29L L60H N118H",3
"lib2","SARS-CoV-2","CAAATAGCAACACGAG",7,169.66,10.92,0.09,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATAGCACTCAGGT",12,306.08,9.44,-1.4,0.06,2.86,1.09,0,">1 nonsynonymous","G146M P197R",2
"lib2","SARS-CoV-2","CAAATAGCCAGCAACA",2,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F N13E V37Y Y50L A89E L125S",6
"lib2","SARS-CoV-2","CAAATAGCGACATAAG",2,20.26,8.43,-2.4,0.27,1.5,1,0.04,">1 nonsynonymous","N64I K94Y G116S K128V N171Y",5
"lib2","SARS-CoV-2","CAAATAGCTACAAGTC",2,15.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R N157I P197L",3
"lib2","SARS-CoV-2","CAAATAGGACAATATA",6,52.74,8.97,-1.86,0.18,1.5,1.03,0.01,">1 nonsynonymous","F8Y F99I A145G",3
"lib2","SARS-CoV-2","CAAATAGGATCTATTC",5,35.67,6.06,-4.78,0.39,3,1.12,0,">1 nonsynonymous","V11G G86F N120T G196N",4
"lib2","SARS-CoV-2","CAAATAGGGAAAGGGG",1,18.31,8.34,-2.5,0.1,2.82,1,0.01,">1 nonsynonymous","S36R Y175V L188S",3
"lib2","SARS-CoV-2","CAAATAGGGCACATGA",5,52.23,8.02,-2.81,0.29,1.5,1.08,0.04,">1 nonsynonymous","Y50A Y121L",2
"lib2","SARS-CoV-2","CAAATAGGTACATAAA",2,40.23,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S19L V37M C61L F99M K132R",5
"lib2","SARS-CoV-2","CAAATAGTAGATATTA",7,35.52,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F12D F99L Y178G A190S",4
"lib2","SARS-CoV-2","CAAATAGTCATACACA",1,21.41,8.36,-2.48,0.36,1.5,1.04,0.05,">1 nonsynonymous","V11A F126I E135T T201V",4
"lib2","SARS-CoV-2","CAAATATAAAAGGAAA",10,66.87,10.8,-0.03,0.08,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATATAAAATGAAT",10,169.29,10.72,-0.12,0.03,2.91,1.09,0,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","CAAATATAAAGGTGTA",10,24.75,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","T15P G83M N107I Y123R R179K",5
"lib2","SARS-CoV-2","CAAATATAACTACAAC",5,45.68,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","E10V Y93C Y121L P149S",4
"lib2","SARS-CoV-2","CAAATATACAACCAAA",4,30.62,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V20N N157P G174P A190E",4
"lib2","SARS-CoV-2","CAAATATACGATCATT",7,40.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S41P A81S C158F",3
"lib2","SARS-CoV-2","CAAATATAGCATATAG",6,57.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56Q I88D Y93T T140G G174D P197L T201L",7
"lib2","SARS-CoV-2","CAAATATATACTCCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","F99V I142*",2
"lib2","SARS-CoV-2","CAAATATATATATGAC",6,43.63,6.3,-4.54,0.67,1.5,1.24,0.03,">1 nonsynonymous","T55F K94S S139V",3
"lib2","SARS-CoV-2","CAAATATATGCTTATA",3,34.51,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","V20D Y39M D98V",3
"lib2","SARS-CoV-2","CAAATATCCCGTTTAC",1,14.46,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","C6G Y39H N64M V77F T100A W106V L122T S129L F167E",9
"lib2","SARS-CoV-2","CAAATATCTACTTTTG",1,19.84,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","I2M Y39L K114T Y143L P161N",5
"lib2","SARS-CoV-2","CAAATATCTATAATCA",5,48.82,10.81,-0.03,0.07,2.94,1.06,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","CAAATATGCGATACAC",1,9.13,9.68,-1.16,0.23,1.5,1,0.01,">1 nonsynonymous","R25F Y66R S108T",3
"lib2","SARS-CoV-2","CAAATATGCGGTATGA",3,63.53,10.61,-0.22,0.04,2.97,1.03,0,">1 nonsynonymous","S45D G116T",2
"lib2","SARS-CoV-2","CAAATATGTATAGAGT",4,6.4,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","F47V C61P Q84I P96R G101T V173F",6
"lib2","SARS-CoV-2","CAAATATTAAGAATTT",2,17.72,9.81,-1.03,0.09,2.74,1,0,">1 nonsynonymous","A18Q N58W Q84S",3
"lib2","SARS-CoV-2","CAAATATTACAAATAG",4,32.2,10.25,-0.58,0.06,2.8,1,0,">1 nonsynonymous","T85Y P133S",2
"lib2","SARS-CoV-2","CAAATATTCACCCCGT",6,18.62,8.2,-2.64,0.18,2.33,1.1,0.01,">1 nonsynonymous","A33V K48G T170F",3
"lib2","SARS-CoV-2","CAAATATTTCCACAAA",8,71.36,10.78,-0.05,0.04,2.99,1.02,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","CAAATCAAAAGAGTCG",2,7.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R25K L57R I80L Y91K I142Y E154F P177E",7
"lib2","SARS-CoV-2","CAAATCAAAAGGAAAT",13,37.47,6.35,-4.49,0.55,1.5,1.15,0.02,">1 nonsynonymous","V20Y L60E D75W K94D N171H",5
"lib2","SARS-CoV-2","CAAATCAAACTCCAGA",11,189.8,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C31T S41Y Q176F",3
"lib2","SARS-CoV-2","CAAATCAAATGTGTGT",11,199.45,10.24,-0.59,0.04,2.9,1.04,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","CAAATCAACAGAGTAA",3,162.99,10.61,-0.23,0.03,2.99,1.01,0,">1 nonsynonymous","T3Y G152S L188M",3
"lib2","SARS-CoV-2","CAAATCAACGAAGACT",22,8.46,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5E Y39V G51A C61V",4
"lib2","SARS-CoV-2","CAAATCAAGCTCTTAA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62S F70L D97S V103K",4
"lib2","SARS-CoV-2","CAAATCAAGTACTCCT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L V103Q",2
"lib2","SARS-CoV-2","CAAATCACATAGGCAA",15,70.7,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25N A42M F167S",3
"lib2","SARS-CoV-2","CAAATCACCATACAGC",3,55.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46F D97Y R136P",3
"lib2","SARS-CoV-2","CAAATCACTCAGGAAC",17,201.7,10.16,-0.68,0.04,2.85,1.07,0,">1 nonsynonymous","Y66M G116A V194L",3
"lib2","SARS-CoV-2","CAAATCATAAATCAGG",7,68.67,8.33,-2.51,0.1,2.45,1.03,0,">1 nonsynonymous","F12L V65L N109L N171E",4
"lib2","SARS-CoV-2","CAAATCATATGAGAAA",4,97.9,8.42,-2.41,0.09,1.82,1.06,0,">1 nonsynonymous","G74H V173S",2
"lib2","SARS-CoV-2","CAAATCATGATCATTC",8,63.72,9.79,-1.05,0.13,2.56,1.06,0,">1 nonsynonymous","S41M C61D D90S N120C",4
"lib2","SARS-CoV-2","CAAATCATTGTCATCG",5,27.77,6,-4.84,1.49,3,1.09,0,">1 nonsynonymous","V20G T85D R127S D137R",4
"lib2","SARS-CoV-2","CAAATCCAACATATTT",2,11.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C31M Y91L Y165S",3
"lib2","SARS-CoV-2","CAAATCCACTAAATTA",9,69.78,10.83,-0.01,0.04,3,1.02,0,">1 nonsynonymous","T85S P149R",2
"lib2","SARS-CoV-2","CAAATCCCAGTGTACT",1,15.3,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T63S F70P T85H L162S",4
"lib2","SARS-CoV-2","CAAATCCCATTAGCAT",15,142.14,10.79,-0.05,0.05,2.98,1.06,0,">1 nonsynonymous","Y35W T63I P149T",3
"lib2","SARS-CoV-2","CAAATCCCCGACCCAG",4,110.51,10.84,0.01,0.04,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATCCGAATTGACT",4,19.09,9.33,-1.51,0.32,1.5,1,0.05,">1 nonsynonymous","T3C D112V",2
"lib2","SARS-CoV-2","CAAATCCGACGCCCAA",6,63.04,6.19,-4.65,0.75,1.5,1.27,0.02,">1 nonsynonymous","W106A S113A Y119C A190C",4
"lib2","SARS-CoV-2","CAAATCCGCACAATTA",20,109.42,9.45,-1.38,0.07,1.92,1.06,0,">1 nonsynonymous","F12R S43P",2
"lib2","SARS-CoV-2","CAAATCCGTTGACGTT",2,73.59,10.49,-0.35,0.04,2.94,1.06,0,"1 nonsynonymous","A22L",1
"lib2","SARS-CoV-2","CAAATCCTTAGTACGG",3,36.28,6,-4.84,0.77,1.5,1.1,0.01,">1 nonsynonymous","S29A N107F",2
"lib2","SARS-CoV-2","CAAATCGAAAAAAAAT",2,45.41,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G86F P177A",2
"lib2","SARS-CoV-2","CAAATCGAAAAGCATA",3,51.92,10.86,0.02,0.08,2.85,1.17,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","CAAATCGACCTAACAA",8,0.63,NA,NA,NA,NA,NA,NA,"stop","P7E K56G N107Y S139* G152N G174R",6
"lib2","SARS-CoV-2","CAAATCGAGCAACATT",3,5.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F156E V182F",2
"lib2","SARS-CoV-2","CAAATCGCTTGACATG",5,105.48,9.42,-1.42,0.07,2.37,1.01,0,">1 nonsynonymous","V32G G155I V173K",3
"lib2","SARS-CoV-2","CAAATCGGTGTATCTA",3,32.78,9.08,-1.75,0.25,1.5,1.03,0.02,">1 nonsynonymous","N4A L183T",2
"lib2","SARS-CoV-2","CAAATCGTAAACATTA",6,35.79,10,-0.84,0.08,2.4,1.05,0,">1 nonsynonymous","D59C D90F",2
"lib2","SARS-CoV-2","CAAATCTACCTGGATA",1,61.08,10.23,-0.61,0.04,2.93,1.05,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","CAAATCTAGTTGGGAT",16,124.86,10.75,-0.08,0.05,2.93,1.04,0,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","CAAATCTATGATAACT",6,101.04,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G51Y Y119S Y178T H189Y",4
"lib2","SARS-CoV-2","CAAATCTCATAAAGAA",3,13.14,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I88Y I138F P197L",3
"lib2","SARS-CoV-2","CAAATCTCATTACAAA",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y S45Y Y123K T140L",4
"lib2","SARS-CoV-2","CAAATCTCCCCGGTTT",5,37.39,10.7,-0.14,0.06,2.85,1.11,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","CAAATCTCCCGTATAC",9,25.53,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","V32Y C49R Q84Y",3
"lib2","SARS-CoV-2","CAAATCTCTGAAAATA",1,52.64,10.8,-0.03,0.04,2.95,1.05,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","CAAATCTGTTCTTTGG",1,37.3,7.07,-3.76,0.52,1.5,1.02,0.06,">1 nonsynonymous","G86A D90A D97I N109K R179L",5
"lib2","SARS-CoV-2","CAAATCTTATTAAGCT",15,199.79,10.09,-0.74,0.07,2.44,1.03,0,">1 nonsynonymous","K94N I138K",2
"lib2","SARS-CoV-2","CAAATGAAAAACCTGT",7,68.57,10.46,-0.37,0.06,2.89,1.1,0,"1 nonsynonymous","K94N",1
"lib2","SARS-CoV-2","CAAATGAAACTCCAAG",8,16.41,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","P133T V182N",2
"lib2","SARS-CoV-2","CAAATGAAAGTACGCA",12,265.2,10.73,-0.11,0.03,2.94,1.06,0,">1 nonsynonymous","N4H N110V V153L",3
"lib2","SARS-CoV-2","CAAATGAACACTCGAC",7,109.95,10.04,-0.8,0.06,2.56,1.07,0,">1 nonsynonymous","D59T Y91A",2
"lib2","SARS-CoV-2","CAAATGAACACTTTAG",16,225.31,10.48,-0.35,0.04,2.86,1.06,0,">1 nonsynonymous","A33P Y123M",2
"lib2","SARS-CoV-2","CAAATGAACTCAAACT",14,82.95,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R16F V71N P149E G152A",4
"lib2","SARS-CoV-2","CAAATGAAGCGGAACG",9,90.92,6.51,-4.32,0.42,1.5,1.24,0.02,">1 nonsynonymous","W23L T85Y",2
"lib2","SARS-CoV-2","CAAATGAATAAGGAAA",16,78.71,6,-4.84,1.23,1.5,1.22,0.01,">1 nonsynonymous","A14F F70A D98G Y165F P197S",5
"lib2","SARS-CoV-2","CAAATGAATGGCAAAT",2,40.2,7.39,-3.44,0.2,1.87,1.2,0.01,">1 nonsynonymous","D90L G152V L183F",3
"lib2","SARS-CoV-2","CAAATGACGATGACAA",2,17.73,10.46,-0.38,0.13,2.8,1.06,0.01,">1 nonsynonymous","F44Y S147C",2
"lib2","SARS-CoV-2","CAAATGACTAGACCCT",4,20.44,6.7,-4.13,0.31,1.5,1.11,0.01,">1 nonsynonymous","S19G V37N T170V",3
"lib2","SARS-CoV-2","CAAATGACTTCCCCGT",3,6.03,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","G86H F126E E141H",3
"lib2","SARS-CoV-2","CAAATGAGCCGTATTG",2,67.5,10.61,-0.22,0.05,2.97,1.04,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","CAAATGAGTTAACACT",3,15.85,10.78,-0.05,0.07,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATGCAATTAGTGA",3,26.64,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","E10L T55N P82V S113C",4
"lib2","SARS-CoV-2","CAAATGCATGAGCATG",1,31.96,8.88,-1.95,0.08,2.78,1.11,0,">1 nonsynonymous","N1H L60I G117T",3
"lib2","SARS-CoV-2","CAAATGCCAAGGGAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","G9R Y35K I88M E141M C150*",5
"lib2","SARS-CoV-2","CAAATGCCATTAAAAA",3,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y A22T A33V D137G P149K F156V",6
"lib2","SARS-CoV-2","CAAATGCCGGAACCGG",4,133.45,10.12,-0.71,0.04,2.79,1.03,0,">1 nonsynonymous","S45W S147R",2
"lib2","SARS-CoV-2","CAAATGCCGGCATTCG",9,94.47,10.45,-0.39,0.04,2.87,1.05,0,">1 nonsynonymous","S41K C61I F160S",3
"lib2","SARS-CoV-2","CAAATGCCTGTACCGA",2,13.63,6,-4.84,1.09,1.5,1.13,0.01,">1 nonsynonymous","V37S N40Y D75R G86S K114E Y123S",6
"lib2","SARS-CoV-2","CAAATGCGAATTCTCG",3,8.97,10.92,0.09,0.09,2.85,1.2,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAATGCTAATATTGA",9,84.44,9.29,-1.55,0.07,1.88,1.06,0,"1 nonsynonymous","F12N",1
"lib2","SARS-CoV-2","CAAATGCTATCAAAAG",3,10.56,10.63,-0.21,0.1,2.99,1.04,0.01,">1 nonsynonymous","T3I N171Q",2
"lib2","SARS-CoV-2","CAAATGCTGAAGGGAC",4,54.96,10.52,-0.32,0.03,2.86,1.15,0,"1 nonsynonymous","N120C",1
"lib2","SARS-CoV-2","CAAATGCTGTATCCGG",3,28.54,6,-4.84,0.99,2.89,1.12,0,">1 nonsynonymous","I2S G74E F99Y A105M P149F F185Y",6
"lib2","SARS-CoV-2","CAAATGCTGTCCTGTT",8,0.49,NA,NA,NA,NA,NA,NA,"stop","T63A A105*",2
"lib2","SARS-CoV-2","CAAATGGACATGAAAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","CAAATGGACTAACAAT",2,37.21,10.72,-0.12,0.06,2.98,1.02,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","CAAATGGCCAATATAC",7,110.66,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P82Y Y91A S139Q P161L",4
"lib2","SARS-CoV-2","CAAATGGGACCAAGGA",1,29.84,7.95,-2.89,0.19,1.71,1.13,0.02,">1 nonsynonymous","N107R R136K I142Y",3
"lib2","SARS-CoV-2","CAAATGTACGACAGGT",4,47.31,9.9,-0.94,0.16,2.03,1.03,0.01,">1 nonsynonymous","D34S P96N T201R",3
"lib2","SARS-CoV-2","CAAATGTATACGAAAT",3,60.06,9.12,-1.71,0.1,2.86,1.18,0,">1 nonsynonymous","T148F N157G",2
"lib2","SARS-CoV-2","CAAATGTATTACCACG",2,30.08,10.46,-0.38,0.09,2.8,1.01,0,"1 nonsynonymous","N130T",1
"lib2","SARS-CoV-2","CAAATGTATTTATAAA",1,49.06,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C49N E141P",2
"lib2","SARS-CoV-2","CAAATGTCAGCCATTT",10,33.14,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I2V L60V V77T P82T E135N",5
"lib2","SARS-CoV-2","CAAATGTGGCGAGAAT",4,77.54,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V32L L95F G172K",3
"lib2","SARS-CoV-2","CAAATGTGGTTCAACT",2,44.34,10.78,-0.05,0.04,2.9,1.07,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","CAAATGTTACCCGCAC",3,62.43,6,-4.84,2,1.5,1.16,0.03,"1 nonsynonymous","F167R",1
"lib2","SARS-CoV-2","CAAATGTTCCATTATG",5,90.2,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","P96Q Y159E",2
"lib2","SARS-CoV-2","CAAATGTTCTTAAGCA",2,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M I88W G146A G174L P197V",5
"lib2","SARS-CoV-2","CAAATTAAAAATCCAT",6,8.07,NA,NA,NA,NA,NA,NA,"stop","E10Y A33* A81R A89S P96S G174Y",6
"lib2","SARS-CoV-2","CAAATTAAAACAAAAT",6,34.98,6,-4.84,1.17,1.5,1.11,0.01,">1 nonsynonymous","V20C N118S R127A S164P",4
"lib2","SARS-CoV-2","CAAATTAAATCACCCA",11,37.66,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6L C61L G83W D98L W106V S113P Y123S P149E",8
"lib2","SARS-CoV-2","CAAATTAAATCGGTGT",11,43.79,6.51,-4.33,0.32,1.5,1.14,0.01,">1 nonsynonymous","A42M S69T Y93Q",3
"lib2","SARS-CoV-2","CAAATTAACGAATCGA",3,9.8,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","Y21L C31N N40Y G74S",4
"lib2","SARS-CoV-2","CAAATTAATTTAGAAA",8,38.22,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I80S T100I A105R",3
"lib2","SARS-CoV-2","CAAATTACAAAATACG",3,0.83,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","CAAATTACATGCCCAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","CAAATTACCAAGACCC",7,0.15,NA,NA,NA,NA,NA,NA,"stop","G117* E154T",2
"lib2","SARS-CoV-2","CAAATTACCACAAGTA",14,129.26,8,-2.83,0.21,1.5,1.02,0.02,">1 nonsynonymous","A89T D98G G146M",3
"lib2","SARS-CoV-2","CAAATTACCGAACCCT",10,75.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38R D59H K87R L95A",4
"lib2","SARS-CoV-2","CAAATTACCTTCTATA",5,143.9,10.5,-0.34,0.04,2.93,1.06,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","CAAATTACGCCTGACG",1,14.3,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C49S G101V S113M",3
"lib2","SARS-CoV-2","CAAATTACGTAAAACA",3,30.78,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G9V S45I A105M D112E",4
"lib2","SARS-CoV-2","CAAATTAGACAGATGG",4,71.06,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L5M F17T L38A V71G G172D",5
"lib2","SARS-CoV-2","CAAATTAGATAATCAT",1,3.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57F Y178D",2
"lib2","SARS-CoV-2","CAAATTAGCAAAGATC",20,182.73,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Q79H I80P S113V Y119R Q144S",5
"lib2","SARS-CoV-2","CAAATTAGCTAATTTG",14,177.95,10.69,-0.14,0.03,2.93,1.06,0,"1 nonsynonymous","T85F",1
"lib2","SARS-CoV-2","CAAATTAGGTCTGCGG",11,297.89,10.18,-0.66,0.02,2.73,1.04,0,">1 nonsynonymous","V173S P191R",2
"lib2","SARS-CoV-2","CAAATTAGTCAATTGA",14,110.58,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N40V K56L A105S E141N P149I P161F",6
"lib2","SARS-CoV-2","CAAATTAGTTAACATA",3,31.04,9.11,-1.73,0.1,1.5,1.1,0.01,">1 nonsynonymous","N1F F62W V153G V181T",4
"lib2","SARS-CoV-2","CAAATTATACGTCATG",7,97.89,9.06,-1.77,0.12,1.56,1.07,0.01,">1 nonsynonymous","N24I K48V L162M",3
"lib2","SARS-CoV-2","CAAATTATACTTTTTA",6,51.42,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C61M G166C F167V",3
"lib2","SARS-CoV-2","CAAATTATATAACTAA",9,78.2,9.4,-1.43,0.11,1.74,1.14,0.01,"1 nonsynonymous","G86A",1
"lib2","SARS-CoV-2","CAAATTATCACACACA",14,69.51,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K87D L95Y T140W",3
"lib2","SARS-CoV-2","CAAATTATCCGACTCC",1,26.36,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F17R I28H L38A",3
"lib2","SARS-CoV-2","CAAATTATCCTACCAG",3,29.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V52S R73M P82T W106Q G155P",5
"lib2","SARS-CoV-2","CAAATTATTCTTATGA",2,25.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R25I R136V",2
"lib2","SARS-CoV-2","CAAATTCAAACTACAA",2,33.27,10.3,-0.53,0.04,2.95,1.07,0,">1 nonsynonymous","C61S G83Y A190W",3
"lib2","SARS-CoV-2","CAAATTCAAAGCTAGG",2,0.6,NA,NA,NA,NA,NA,NA,"stop","L5C N13V V52A D75L D98L W106* Y119F S184H",8
"lib2","SARS-CoV-2","CAAATTCAAAGTCTAA",8,125.79,8.02,-2.81,0.13,1.55,1.13,0.01,">1 nonsynonymous","A105T S129N Q144C E186G",4
"lib2","SARS-CoV-2","CAAATTCAAGATATAT",10,208.29,10.77,-0.06,0.04,2.92,1.09,0,"1 nonsynonymous","Q84E",1
"lib2","SARS-CoV-2","CAAATTCACTTATAAC",3,45.73,8.84,-1.99,0.15,1.75,1.14,0.01,">1 nonsynonymous","C31L W106R",2
"lib2","SARS-CoV-2","CAAATTCAGGAACTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","CAAATTCATGAACAAG",3,48.01,10.19,-0.65,0.08,2.55,1.06,0,"1 nonsynonymous","S45I",1
"lib2","SARS-CoV-2","CAAATTCATTGTACCA",4,14.17,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C6S G9M P133Q Y165G",4
"lib2","SARS-CoV-2","CAAATTCCAAACATTT",3,22.32,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N4Y L60S F70L D90R",4
"lib2","SARS-CoV-2","CAAATTCCATTCAAAA",4,135.75,NA,NA,NA,NA,NA,NA,"stop","A81* I138S",2
"lib2","SARS-CoV-2","CAAATTCCCAATCAAC",2,23.24,10.69,-0.14,0.1,2.78,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATTCCCACTCGCA",2,17.66,6,-4.84,2,1.5,1.14,0.03,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CAAATTCGCTTTTACG",1,23.94,10.18,-0.66,0.08,2.94,1.12,0,">1 nonsynonymous","N110T G174T",2
"lib2","SARS-CoV-2","CAAATTCGTTCAACAA",8,112.27,9.51,-1.33,0.04,2.9,1.1,0,"1 nonsynonymous","G74E",1
"lib2","SARS-CoV-2","CAAATTCTAACCCCTG",9,156.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D34L N40T D97L Q168L",4
"lib2","SARS-CoV-2","CAAATTCTATAGAGAC",7,192.7,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y121L N157A Q176G",3
"lib2","SARS-CoV-2","CAAATTCTGGCAATCG",6,88.37,10.19,-0.65,0.04,2.82,1.08,0,">1 nonsynonymous","C6A T201K",2
"lib2","SARS-CoV-2","CAAATTGAAAGTATTG",3,34.08,6,-4.84,2,3,1.07,0,">1 nonsynonymous","N30I P96G G116S P161Y A192S",5
"lib2","SARS-CoV-2","CAAATTGAGGGTTCGA",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8E C61L",2
"lib2","SARS-CoV-2","CAAATTGATCAAAATG",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N K94P K114L L162A",4
"lib2","SARS-CoV-2","CAAATTGCACCCACAA",1,14.11,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I104M F185D",2
"lib2","SARS-CoV-2","CAAATTGCCTGTGCAA",10,65.9,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I88M P161R",2
"lib2","SARS-CoV-2","CAAATTGCGCTCACCA",6,2.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","CAAATTGCGTTAACCA",2,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Q F44A N92I G174F V181F",5
"lib2","SARS-CoV-2","CAAATTGCTACTGCAA",3,31.91,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9S W23V V37N D112G T201M",5
"lib2","SARS-CoV-2","CAAATTGCTATTAAAA",1,16.97,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","C150R V173N",2
"lib2","SARS-CoV-2","CAAATTGTACCATCAA",6,68.43,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A14H N30F A67I C102L N151P Q163L G174L",7
"lib2","SARS-CoV-2","CAAATTGTAGAGCTAA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D D68L S139C",3
"lib2","SARS-CoV-2","CAAATTGTCTTAAGAC",6,153.63,10.83,-0.01,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAATTGTGGGATTTA",5,19.85,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T85D V103E Y121L",3
"lib2","SARS-CoV-2","CAAATTGTGTACACCT",3,23.48,6.02,-4.82,1.29,1.5,1.27,0.03,">1 nonsynonymous","V11L N13L Y93I",3
"lib2","SARS-CoV-2","CAAATTTAAGCTATAA",11,303.4,8.65,-2.19,0.08,2.98,1.04,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","CAAATTTACAACACTT",4,26.94,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10T S19Q L125S N157V A190H",5
"lib2","SARS-CoV-2","CAAATTTACGAGAATC",5,23.48,8.82,-2.02,0.2,1.54,1.19,0.02,">1 nonsynonymous","P96R F134I",2
"lib2","SARS-CoV-2","CAAATTTACGATAGCG",7,58.72,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F12K P96G F99G",3
"lib2","SARS-CoV-2","CAAATTTAGCTAAGCA",8,109.2,9.85,-0.98,0.13,1.82,1.08,0.01,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","CAAATTTATAGAACGA",2,9.7,8.9,-1.94,0.29,1.88,1.22,0.05,">1 nonsynonymous","A14G V20R S41R Y66L G146F",5
"lib2","SARS-CoV-2","CAAATTTATCACAACA",4,5.35,9,-1.83,0.35,1.69,1.25,0.03,">1 nonsynonymous","N13E D90R W106Y",3
"lib2","SARS-CoV-2","CAAATTTCACTACGGT",6,63.17,11.05,0.21,0.07,2.92,1.09,0,">1 nonsynonymous","S29G N171Y",2
"lib2","SARS-CoV-2","CAAATTTCTATAGTGC",6,133.97,10.78,-0.06,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAAAAAGTATCTA",1,39.61,10.05,-0.78,0.06,2.94,1.07,0,">1 nonsynonymous","F160T G174P",2
"lib2","SARS-CoV-2","CAACAAAAATATCCCA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","K48E W106T D112* T148Y P161T P197Y",6
"lib2","SARS-CoV-2","CAACAAAAATCATCGA",3,2.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","CAACAAAACAAAGTGA",2,34.58,8.39,-2.45,0.2,2.45,1.05,0.02,">1 nonsynonymous","Y39I G83F Y175L S200G",4
"lib2","SARS-CoV-2","CAACAAAACAGACGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61F G86* Y93H C150R T170N",5
"lib2","SARS-CoV-2","CAACAAAATAACTTAA",3,27.87,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6S F62I R73Y Y119K G155D",5
"lib2","SARS-CoV-2","CAACAAAATGAACCAG",12,53.2,8.93,-1.91,0.14,1.55,1.08,0.01,">1 nonsynonymous","N40I S53F D97I",3
"lib2","SARS-CoV-2","CAACAAAATGAGCGGA",3,183.27,9.94,-0.89,0.06,2.55,1.01,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","CAACAAACATGATCAT",4,28.75,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9I S45L F62S P149Q G166Q P169T",6
"lib2","SARS-CoV-2","CAACAAACCCCTCTAG",18,167.46,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I2N R25L S45I N58A R136N P197Q",6
"lib2","SARS-CoV-2","CAACAAACCTACACGT",14,235.47,10.74,-0.1,0.03,2.93,1.07,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","CAACAAACCTGCCCGT",5,51.22,8.64,-2.2,0.08,2.78,1.04,0,">1 nonsynonymous","I104M T140I I142E T201S",4
"lib2","SARS-CoV-2","CAACAAACGGGTACTA",3,17.85,9.96,-0.87,0.1,2.28,1.02,0,">1 nonsynonymous","R27Y D97W S184L S200V",4
"lib2","SARS-CoV-2","CAACAAACTCCTGCAG",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129A D137W R179G T201N",4
"lib2","SARS-CoV-2","CAACAAAGGAAAATGT",8,45.52,10.11,-0.73,0.06,2.84,1.06,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","CAACAAAGTATATATC",17,202.61,10.7,-0.14,0.02,2.94,1.06,0,">1 nonsynonymous","S45H Q84T",2
"lib2","SARS-CoV-2","CAACAAATAAAATAAT",1,8.31,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","N1T V52N N107M K128Y E135S",5
"lib2","SARS-CoV-2","CAACAAATATATACTA",3,72.69,10.68,-0.15,0.07,2.82,1.19,0,">1 nonsynonymous","S43D V115S",2
"lib2","SARS-CoV-2","CAACAAATCTACAAAT",7,6.92,NA,NA,NA,NA,NA,NA,"stop","Y21K K128* P161R V182Y",4
"lib2","SARS-CoV-2","CAACAAATTAGACGAG",1,0.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27P",1
"lib2","SARS-CoV-2","CAACAAATTATGCGAA",2,14.85,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","D34V N107V N130M P161N",4
"lib2","SARS-CoV-2","CAACAAATTGACCAGA",5,12.75,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","C6Q P54A P82M",3
"lib2","SARS-CoV-2","CAACAAATTTCTCAAA",3,51.2,10.84,0.01,0.05,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAACAAGGCATCG",4,38.47,10.84,0,0.07,2.84,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAACAATCCTCAC",1,16.53,10.98,0.15,0.07,2.99,1,0,"synonymous","",0
"lib2","SARS-CoV-2","CAACAACACTCTTAAA",13,209.12,10.6,-0.23,0.04,2.9,1.03,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","CAACAACCACATTTTT",7,52.41,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5W V32L G101K N157M V182L",5
"lib2","SARS-CoV-2","CAACAACCCTCTAACC",4,49.27,9.67,-1.16,0.07,1.9,1.06,0,">1 nonsynonymous","R27F K94S",2
"lib2","SARS-CoV-2","CAACAACCGAAAGAAA",1,75.07,10.62,-0.21,0.04,2.98,1.01,0,">1 nonsynonymous","L5S F134L",2
"lib2","SARS-CoV-2","CAACAACCGGCAATCA",1,23.97,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A81Q I88Y G116N G146I",4
"lib2","SARS-CoV-2","CAACAACGAAATATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142S E154M",2
"lib2","SARS-CoV-2","CAACAACGACTACACC",6,47.45,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G86D N120M S139T C195K",4
"lib2","SARS-CoV-2","CAACAACGGAACGTTA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","V71K R73G K87M L95T G174*",5
"lib2","SARS-CoV-2","CAACAACGTCATGACG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G T140P",2
"lib2","SARS-CoV-2","CAACAACTAAAGGTGA",4,51.93,6,-4.84,1.65,1.5,1.2,0.02,">1 nonsynonymous","L38R S129N Q176V",3
"lib2","SARS-CoV-2","CAACAACTCCCTGAGT",7,52.58,10.72,-0.12,0.07,2.88,1.13,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CAACAACTCGCGAGAA",4,0,NA,NA,NA,NA,NA,NA,"stop","G9A A33M V103A G116P Y143*",5
"lib2","SARS-CoV-2","CAACAACTGTCTCCGA",2,7.8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A81T N107L N118C E154I L183A",5
"lib2","SARS-CoV-2","CAACAACTTAGGCACT",3,54.5,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I28N S36G K48D Q84W D112I S139I",6
"lib2","SARS-CoV-2","CAACAAGAACGAAACA",1,7.72,10.66,-0.18,0.2,2.9,1.06,0.01,">1 nonsynonymous","Y35V T55R P149L",3
"lib2","SARS-CoV-2","CAACAAGAATCCTAAG",6,183.02,10.75,-0.08,0.04,2.87,1.14,0,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","CAACAAGACAGAATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H F17M F99D P161G",4
"lib2","SARS-CoV-2","CAACAAGACGAACAAG",5,74.84,6.06,-4.78,1.22,1.5,1.23,0.03,">1 nonsynonymous","A89C A105T N107C",3
"lib2","SARS-CoV-2","CAACAAGCATTTCGGC",1,18.26,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T46V K56A Y143T C158D",4
"lib2","SARS-CoV-2","CAACAAGCCATGACCA",4,52.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S V65L Y121M",3
"lib2","SARS-CoV-2","CAACAAGGAATGGCGT",2,23.14,10.71,-0.13,0.04,3,1,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","CAACAAGGACAAATAA",4,55.07,8.47,-2.37,0.2,2.45,1.08,0.01,"1 nonsynonymous","Y175R",1
"lib2","SARS-CoV-2","CAACAAGGACGAAGTA",8,35.03,6,-4.84,2,1.5,1.43,0.05,">1 nonsynonymous","F12Y K26M G101S N157I",4
"lib2","SARS-CoV-2","CAACAAGGCACCATAG",3,42.94,10.78,-0.05,0.11,2.77,1.07,0,">1 nonsynonymous","S29G T63E S200P",3
"lib2","SARS-CoV-2","CAACAAGTCACAAACC",1,24.65,10.71,-0.13,0.05,2.99,1.03,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","CAACAAGTCCCCCGGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S R16S R27H T55L",4
"lib2","SARS-CoV-2","CAACAATAAATAGTGT",3,8.99,10.76,-0.08,0.02,3,1,0,"1 nonsynonymous","Q84S",1
"lib2","SARS-CoV-2","CAACAATACAGACGGT",4,31.26,10.77,-0.07,0.05,2.91,1.09,0,">1 nonsynonymous","T63A L122Y",2
"lib2","SARS-CoV-2","CAACAATAGAAACAAC",4,42.44,10.55,-0.28,0.07,2.89,1.07,0,"1 nonsynonymous","S184L",1
"lib2","SARS-CoV-2","CAACAATAGACAGTGG",6,4.88,NA,NA,NA,NA,NA,NA,"stop","S41L F99* A190L",3
"lib2","SARS-CoV-2","CAACAATAGACCAATG",4,35.3,10.86,0.02,0.06,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAATAGATAAGTG",10,29.41,7.11,-3.73,0.37,1.5,1.25,0.03,">1 nonsynonymous","G9M S41K W106S Q144R",4
"lib2","SARS-CoV-2","CAACAATATTGTCACA",14,177.59,10.75,-0.09,0.04,2.95,1.06,0,">1 nonsynonymous","N151V F160K",2
"lib2","SARS-CoV-2","CAACAATCCGGAGTAT",3,90.87,9.36,-1.48,0.07,1.8,1.07,0,">1 nonsynonymous","V32N Y39E V52L R127G",4
"lib2","SARS-CoV-2","CAACAATGACTAAACA",7,28.15,6.45,-4.38,0.59,1.5,1.15,0.03,">1 nonsynonymous","F44I N64K V77A F99R L131M A145L",6
"lib2","SARS-CoV-2","CAACAATGACTTAATA",10,119.55,10.8,-0.04,0.04,2.96,1.05,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CAACAATGTAATACCT",8,134.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11D N120K G166T Q176L",4
"lib2","SARS-CoV-2","CAACAATGTACAAGGT",1,25.67,10.74,-0.09,0.14,2.78,1.2,0,"synonymous","",0
"lib2","SARS-CoV-2","CAACAATTACCAATGG",12,88.89,10.92,0.08,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAATTAGGACACG",1,96.11,10.56,-0.28,0.05,2.95,1.05,0,">1 nonsynonymous","F47V T63N",2
"lib2","SARS-CoV-2","CAACAATTGACAGATA",5,186.43,10.58,-0.26,0.03,2.94,1.04,0,">1 nonsynonymous","D90L T201A",2
"lib2","SARS-CoV-2","CAACAATTGCAGGCTG",9,0.25,NA,NA,NA,NA,NA,NA,"stop","I80A N92K P149*",3
"lib2","SARS-CoV-2","CAACAATTGCTACCAC",14,174.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29N G51L S108M H189P",4
"lib2","SARS-CoV-2","CAACAATTTCCTAGAT",2,17.93,6.01,-4.82,1.31,1.5,1.28,0.04,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","CAACAATTTTGCCTCG",1,18.87,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12Y G86S N120Y T170S",4
"lib2","SARS-CoV-2","CAACACAAAACACAAT",5,14.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7W C102R E141R",3
"lib2","SARS-CoV-2","CAACACAAACCCCGAA",6,114.5,8.47,-2.37,0.11,2.63,1.12,0,">1 nonsynonymous","G9S C31R A145I G166A",4
"lib2","SARS-CoV-2","CAACACAAATGTCACC",1,69.18,10.46,-0.37,0.05,2.96,1.01,0,"1 nonsynonymous","N24Y",1
"lib2","SARS-CoV-2","CAACACAACTTCAGGG",8,206.87,8.78,-2.06,0.06,2.8,1.07,0,">1 nonsynonymous","N64I V71I G166R",3
"lib2","SARS-CoV-2","CAACACAAGATACTTT",2,7.82,6.45,-4.38,0.68,1.5,1,0.05,">1 nonsynonymous","P82L D98F C102F N107F L162R V173H",6
"lib2","SARS-CoV-2","CAACACAAGTAACTCC",9,88.17,9.77,-1.07,0.1,2.15,1.06,0,">1 nonsynonymous","D59G D112I",2
"lib2","SARS-CoV-2","CAACACAATACCCAAG",5,43.12,9.45,-1.38,0.07,2.96,1.06,0,">1 nonsynonymous","S43T Y119S",2
"lib2","SARS-CoV-2","CAACACAATGAAGTCA",18,217.71,10.95,0.11,0.05,2.93,1.08,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","CAACACACAACGAAAC",3,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103P Q144Y",2
"lib2","SARS-CoV-2","CAACACACCCAGTAGG",4,54.62,7.16,-3.68,0.13,1.61,1.13,0,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","CAACACAGACTGAGTT",4,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113K C150I",2
"lib2","SARS-CoV-2","CAACACAGAGTGACAT",2,26.06,6,-4.84,2,1.5,1.39,0.05,">1 nonsynonymous","A67L Q84H L95K",3
"lib2","SARS-CoV-2","CAACACATAATAAAAT",3,0.56,NA,NA,NA,NA,NA,NA,"stop","C61T Y119* F160W",3
"lib2","SARS-CoV-2","CAACACATCACTGACT",2,79.35,10.87,0.03,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACACATCCTTCAGC",16,67.65,6.18,-4.66,0.67,1.5,1.21,0.01,">1 nonsynonymous","F12P V71D L131T",3
"lib2","SARS-CoV-2","CAACACATGAAAAATG",2,47.37,8.26,-2.58,0.14,2.8,1.01,0.01,">1 nonsynonymous","K48L Y119V G174T",3
"lib2","SARS-CoV-2","CAACACATGTAAGTAC",4,106.44,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G9M A89H G117P S129E I138V",5
"lib2","SARS-CoV-2","CAACACATGTTGCAGT",1,8.46,8.24,-2.6,0.44,1.87,1,0.04,">1 nonsynonymous","Y165E A190E",2
"lib2","SARS-CoV-2","CAACACATTAATGAAG",8,46.04,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R27W G74Q A81S K87T G101M A105Q Y175F",7
"lib2","SARS-CoV-2","CAACACATTATCTAAG",6,36.16,9.81,-1.02,0.14,1.9,1.05,0.01,">1 nonsynonymous","I2T Q84P",2
"lib2","SARS-CoV-2","CAACACCAACATTGCT",16,164.63,9.17,-1.67,0.07,1.65,1.1,0,">1 nonsynonymous","V32K Q84P",2
"lib2","SARS-CoV-2","CAACACCACACGAGTA",1,4.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","CAACACCTTAATGAAA",2,8.48,9.81,-1.03,0.15,2.45,1.23,0.01,">1 nonsynonymous","T3R Y66K F160S A192S",4
"lib2","SARS-CoV-2","CAACACCTTAGTCTAG",2,22.38,10.54,-0.29,0.07,2.99,1.04,0,">1 nonsynonymous","S41I D98A",2
"lib2","SARS-CoV-2","CAACACGAAAATACCC",1,98.92,10.85,0.01,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACACGACATAATAC",6,13.84,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R16H Y143D E154L",3
"lib2","SARS-CoV-2","CAACACGACTAAGCAA",12,186.36,10.79,-0.05,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACACGAGAACATGC",4,20.75,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","V37E L57V S113L F156R",4
"lib2","SARS-CoV-2","CAACACGATATACAAG",4,19.99,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","CAACACGATATTATCA",1,47.47,9.92,-0.92,0.09,2.11,1.05,0,">1 nonsynonymous","S45I Y66V T201S",3
"lib2","SARS-CoV-2","CAACACGCGTTAAGTA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M Y91I I104K",3
"lib2","SARS-CoV-2","CAACACGGCATTTAGA",1,14.38,10.16,-0.68,0.13,2.71,1.09,0,">1 nonsynonymous","D90T V153C",2
"lib2","SARS-CoV-2","CAACACGGGGATTACC",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I A42T P133V",3
"lib2","SARS-CoV-2","CAACACGGTGAATATT",9,89.57,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D90N L95S P149I P161D L188T T201A",6
"lib2","SARS-CoV-2","CAACACGTCAAACGCA",6,103.6,10.7,-0.14,0.04,2.91,1.06,0,">1 nonsynonymous","N13K F47V L122R",3
"lib2","SARS-CoV-2","CAACACGTCGCATAAC",2,30.09,11,0.17,0.08,2.87,1.13,0,">1 nonsynonymous","K56R L122A",2
"lib2","SARS-CoV-2","CAACACGTGAGAGACA",4,16.89,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N24W P82V F126S K132F",4
"lib2","SARS-CoV-2","CAACACGTGGCTAATA",1,8.86,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44L D59V N120T R124H T170K",5
"lib2","SARS-CoV-2","CAACACGTTTTACGTT",8,2.79,NA,NA,NA,NA,NA,NA,"stop","V77K D98S G117K L188*",4
"lib2","SARS-CoV-2","CAACACTACATCTTCA",6,157.26,6,-4.84,2,1.85,1.13,0,">1 nonsynonymous","A42M F62N F167G",3
"lib2","SARS-CoV-2","CAACACTACTACATGT",5,91.26,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V65I G86Y D112S Y123N Q176I",5
"lib2","SARS-CoV-2","CAACACTAGATTCAAG",2,18.25,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Q84W Y91D V103F",3
"lib2","SARS-CoV-2","CAACACTAGTCTTGAA",9,19.04,6.17,-4.67,1.36,1.5,1.23,0.06,">1 nonsynonymous","F8D A42G I80T S113I V181E",5
"lib2","SARS-CoV-2","CAACACTCTTTTGGAA",5,26.97,6,-4.84,1.43,1.5,1.17,0.02,">1 nonsynonymous","Y91W L183S",2
"lib2","SARS-CoV-2","CAACACTGCAGATTTA",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81E D90K V103D T148G N151F",5
"lib2","SARS-CoV-2","CAACACTTGAGCAAAT",2,30.68,10.65,-0.19,0.04,2.96,1.05,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","CAACACTTGCATTACC",5,11.11,7.78,-3.06,0.4,1.5,1,0.06,">1 nonsynonymous","I104G N107M",2
"lib2","SARS-CoV-2","CAACAGAAACATGGGT",6,209.92,10.72,-0.12,0.02,2.95,1.06,0,"1 nonsynonymous","V153W",1
"lib2","SARS-CoV-2","CAACAGAACACTTGTA",15,99.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S139C L162K",2
"lib2","SARS-CoV-2","CAACAGAACCATTTGG",4,66.29,8.21,-2.62,0.16,1.5,1.11,0.01,">1 nonsynonymous","E10Y A105T N118T",3
"lib2","SARS-CoV-2","CAACAGAATTCCTTAG",1,39.73,10.74,-0.1,0.05,2.94,1.06,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","CAACAGAGTATTTACA",8,48.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y21S C61L G83L D90H S129P T170P",6
"lib2","SARS-CoV-2","CAACAGATGTCCGTTG",2,31.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N4T G86V F99T N107A",4
"lib2","SARS-CoV-2","CAACAGATTTCTCACC",22,68.85,10.61,-0.22,0.02,2.94,1.06,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","CAACAGCAAATCACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","K94* N109F S139*",3
"lib2","SARS-CoV-2","CAACAGCAACTCCAAC",2,24.28,10.68,-0.16,0.09,2.52,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","CAACAGCAATCATGGA",1,30.86,10.18,-0.66,0.08,2.62,1.03,0,">1 nonsynonymous","I138G S184F",2
"lib2","SARS-CoV-2","CAACAGCACAATGCCA",3,23.87,10.91,0.07,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACAGCATCCGGTAA",3,0.93,NA,NA,NA,NA,NA,NA,"stop","A14S R27* I104N R136L Q144S T170Y",6
"lib2","SARS-CoV-2","CAACAGCCAAGTGATT",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62V L95R",2
"lib2","SARS-CoV-2","CAACAGCCATTGGAAT",5,86.74,10.65,-0.19,0.05,2.95,1.05,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","CAACAGCCCTTCTGTG",6,44.49,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83I V181A",2
"lib2","SARS-CoV-2","CAACAGCGGGGTCATG",5,82.37,9.21,-1.63,0.07,2.8,1.16,0,">1 nonsynonymous","K132G Y143V",2
"lib2","SARS-CoV-2","CAACAGCTAATGTCAT",3,118.31,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V77E D137S P197D",3
"lib2","SARS-CoV-2","CAACAGCTGGACAGCA",6,69.89,10.66,-0.18,0.04,2.94,1.05,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","CAACAGGAAAGAAGGT",6,66.91,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11S S41P T46I G101V R124L Q144D F156I",7
"lib2","SARS-CoV-2","CAACAGGAAATTTGAA",10,41.15,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","C61R G74L A89G G101Y",4
"lib2","SARS-CoV-2","CAACAGGAATATATGG",6,38.14,7.83,-3,0.14,1.76,1.07,0.01,">1 nonsynonymous","S45I A145L E154S",3
"lib2","SARS-CoV-2","CAACAGGCGACCGCCA",7,45.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G74L G146R",2
"lib2","SARS-CoV-2","CAACAGTACCATTTGA",12,105.49,10.47,-0.37,0.05,2.89,1.05,0,">1 nonsynonymous","S36Y V194I",2
"lib2","SARS-CoV-2","CAACAGTATTACATAT",4,88.16,10.86,0.03,0.05,2.94,1.06,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","CAACAGTCCATGTACC",4,55.02,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G86I Y91F T100F L162N",4
"lib2","SARS-CoV-2","CAACAGTTGATCTTCG",3,42.75,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","C6F R25V F134L",3
"lib2","SARS-CoV-2","CAACAGTTTGGAAATA",3,0.38,NA,NA,NA,NA,NA,NA,"stop","N24* N40W Q176G",3
"lib2","SARS-CoV-2","CAACATAAACAACCCG",2,1.29,NA,NA,NA,NA,NA,NA,"stop","Y50T A89T S113A P133L T148Y C158F Q163*",7
"lib2","SARS-CoV-2","CAACATAACTACAGGT",11,72.34,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","S43V Y93R A190Q",3
"lib2","SARS-CoV-2","CAACATAATAAAATCG",1,7.63,7.8,-3.04,0.23,2.82,1.01,0.01,">1 nonsynonymous","R27L S41N I142Y N157V P191R",5
"lib2","SARS-CoV-2","CAACATAATCAAATTG",10,198.87,10.22,-0.62,0.03,2.89,1.05,0,">1 nonsynonymous","S41V S129E Y178C",3
"lib2","SARS-CoV-2","CAACATAATTAGTGTA",3,89.28,6,-4.84,2,3,1.2,0,">1 nonsynonymous","K56S N92I A145Q G152Q",4
"lib2","SARS-CoV-2","CAACATACAAACTCAA",6,25.81,7.37,-3.47,0.29,1.5,1.13,0.03,">1 nonsynonymous","F8I S113L",2
"lib2","SARS-CoV-2","CAACATACCCGACGCG",3,53.93,10.2,-0.64,0.06,2.45,1.06,0,">1 nonsynonymous","R27K D59W Q84N P149D",4
"lib2","SARS-CoV-2","CAACATACCTGGTACT",4,40.41,10.38,-0.46,0.16,2.58,1.08,0.01,">1 nonsynonymous","N120V S129I",2
"lib2","SARS-CoV-2","CAACATAGAAACTATT",2,71.57,10.57,-0.27,0.07,2.94,1.03,0,">1 nonsynonymous","S41R D98S",2
"lib2","SARS-CoV-2","CAACATAGTGAACTTT",9,86.68,8.43,-2.41,0.12,1.58,1.15,0.01,">1 nonsynonymous","N1M P161V",2
"lib2","SARS-CoV-2","CAACATATAAATTGCT",6,130.13,10.81,-0.02,0.05,2.93,1.07,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CAACATATAGGCAAAA",5,30.24,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","G9R V37Y T46I G51Y L183G",5
"lib2","SARS-CoV-2","CAACATATAGTACACA",1,5.15,10.36,-0.48,0.14,2.78,1.35,0.01,">1 nonsynonymous","N40M S43C",2
"lib2","SARS-CoV-2","CAACATATCAAGCCAT",11,3.11,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","CAACATATCTGTAATG",3,16.02,10.87,0.03,0.06,2.98,1.04,0,"1 nonsynonymous","A192K",1
"lib2","SARS-CoV-2","CAACATATCTTATATC",15,246.75,10.81,-0.03,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACATATGAATACTG",1,10.27,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36G S139H V181E",3
"lib2","SARS-CoV-2","CAACATATGAGGGCCT",1,6.45,9.77,-1.07,0.16,2.06,1.13,0.01,">1 nonsynonymous","A33D S53I D59M",3
"lib2","SARS-CoV-2","CAACATATGTGGATAC",7,18.92,6,-4.84,2,3,1.21,0.02,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","CAACATCAAGACCAGC",6,60.73,6.4,-4.44,0.54,1.5,1.19,0.02,">1 nonsynonymous","T3A L38Q P161E K198Q",4
"lib2","SARS-CoV-2","CAACATCACACAATAT",6,75.23,10.18,-0.65,0.11,2.45,1.06,0.01,">1 nonsynonymous","T15I T55K V153W",3
"lib2","SARS-CoV-2","CAACATCAGACCAACT",7,134.28,10.47,-0.37,0.06,2.93,1.04,0,">1 nonsynonymous","G152D S184M",2
"lib2","SARS-CoV-2","CAACATCCCGAGATTA",4,23.58,10.6,-0.23,0.07,2.99,1,0,">1 nonsynonymous","P54G C61M N120R",3
"lib2","SARS-CoV-2","CAACATCCTGACCGAT",1,5.98,7.05,-3.78,0.4,2.06,1.16,0.03,"1 nonsynonymous","C102Y",1
"lib2","SARS-CoV-2","CAACATCGAACAGAAT",3,14.65,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9I P54Q R124E K128P",4
"lib2","SARS-CoV-2","CAACATCGAGTCATTC",1,21.16,8.7,-2.13,0.16,1.52,1.05,0.01,">1 nonsynonymous","N40D V103M",2
"lib2","SARS-CoV-2","CAACATCTAACCCCTA",1,22.71,10.77,-0.07,0.08,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACATCTACTATCAA",7,1.11,NA,NA,NA,NA,NA,NA,"stop","G9* F44K P82V K94T N120W",5
"lib2","SARS-CoV-2","CAACATCTAGTCCCAG",1,31.76,9.92,-0.92,0.16,2.67,1.3,0.01,">1 nonsynonymous","T3I F44V",2
"lib2","SARS-CoV-2","CAACATCTCAAAAACA",2,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A Y91Q C102D Y119E",4
"lib2","SARS-CoV-2","CAACATCTGCATAAAC",6,73.66,10.34,-0.5,0.04,2.91,1.02,0,">1 nonsynonymous","P7G L95M S200V",3
"lib2","SARS-CoV-2","CAACATCTTACACATT",3,18.02,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","F62L I80T F99Y",3
"lib2","SARS-CoV-2","CAACATCTTTGGTGTT",7,19.23,10.12,-0.72,0.09,2.99,1.08,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","CAACATGAACCAACGG",13,167.04,10.6,-0.24,0.04,2.89,1.12,0,">1 nonsynonymous","A33G T201L",2
"lib2","SARS-CoV-2","CAACATGAGTAGAACC",5,66.58,9.72,-1.11,0.08,2.51,1.06,0,">1 nonsynonymous","T15R G152V",2
"lib2","SARS-CoV-2","CAACATGATTAGGACA",5,0.3,NA,NA,NA,NA,NA,NA,"stop","I2Y I28V V52Y K128* G172E H189N",6
"lib2","SARS-CoV-2","CAACATGCACCCAAAA",8,236.16,8.77,-2.06,0.15,1.5,1.09,0.01,">1 nonsynonymous","Q84N R136Y",2
"lib2","SARS-CoV-2","CAACATGCAGTATACC",3,24.18,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","S19L N64D L162N",3
"lib2","SARS-CoV-2","CAACATGCCTCATGAC",6,0,NA,NA,NA,NA,NA,NA,"stop","T15I W23C V37* S45T L95K",5
"lib2","SARS-CoV-2","CAACATGCTGTCTTCG",7,45.56,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G74T Q84S F167R",3
"lib2","SARS-CoV-2","CAACATGGTATGACTT",3,3.59,NA,NA,NA,NA,NA,NA,"stop","D34* T55S P96S N130K",4
"lib2","SARS-CoV-2","CAACATGTACGGGAAC",1,15.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61K Q84K P177K",3
"lib2","SARS-CoV-2","CAACATGTCGCTTTAA",1,22.37,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S19K F99S G152L K199G",4
"lib2","SARS-CoV-2","CAACATGTCTACTCAA",1,46.07,10.48,-0.35,0.05,2.96,1.01,0,">1 nonsynonymous","F44S K128E",2
"lib2","SARS-CoV-2","CAACATTAACAAGAGA",4,0,NA,NA,NA,NA,NA,NA,"stop","N4* S53F G86C P96D D112S G166C",6
"lib2","SARS-CoV-2","CAACATTAATTTGAAA",1,13.22,6.56,-4.28,0.55,1.54,1.2,0.05,">1 nonsynonymous","G51N V103F G117V",3
"lib2","SARS-CoV-2","CAACATTACAACCCAA",16,91.78,8.93,-1.91,0.08,1.82,1.05,0,"1 nonsynonymous","R127T",1
"lib2","SARS-CoV-2","CAACATTACATAAACA",4,49.83,9.32,-1.51,0.03,2.96,1.06,0,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","CAACATTATAACCGCA",4,109.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31E F44N G86V N107V V182Y",5
"lib2","SARS-CoV-2","CAACATTATATGCCAA",2,4.18,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAACATTCCCATGTAA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","S43L C61A R127V F160G Q168* S184W",6
"lib2","SARS-CoV-2","CAACATTCGTAATATA",1,10.52,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","L95Q L111W N118V K128T F167T G174S",6
"lib2","SARS-CoV-2","CAACATTCGTGCTGAC",4,1.94,NA,NA,NA,NA,NA,NA,"stop","I28Y K56I Q84* D90S",4
"lib2","SARS-CoV-2","CAACATTCGTTTGAAC",1,7.29,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41M G74H G101Y P149S Y165E",5
"lib2","SARS-CoV-2","CAACATTGGAAGTGCC",15,94.29,9.32,-1.51,0.11,1.82,1.13,0,">1 nonsynonymous","A33V Y50L",2
"lib2","SARS-CoV-2","CAACATTGGACATGTT",5,62.8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T46M C61Y L162G",3
"lib2","SARS-CoV-2","CAACATTGGGCACAGA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S V65R A89N R136C",4
"lib2","SARS-CoV-2","CAACATTGGTTCAGAC",8,1.2,NA,NA,NA,NA,NA,NA,"stop","A14P C61I Q84P T148P P197*",5
"lib2","SARS-CoV-2","CAACATTTATAGATTG",4,10.29,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R27L S45P Y93A L183S",4
"lib2","SARS-CoV-2","CAACATTTGCACAAGG",1,26.2,9.55,-1.28,0.11,2.09,1,0.01,">1 nonsynonymous","S69E R78P S184T",3
"lib2","SARS-CoV-2","CAACCAAAAACCGACT",8,138.55,10.86,0.02,0.05,2.91,1.1,0,">1 nonsynonymous","V37R N64T",2
"lib2","SARS-CoV-2","CAACCAAAAACTTTAC",7,110.81,8.88,-1.96,0.07,1.96,1.09,0,">1 nonsynonymous","F17T D59E T170S",3
"lib2","SARS-CoV-2","CAACCAAAAAGTTGAG",1,15,9.38,-1.46,0.36,2.13,1.33,0.06,">1 nonsynonymous","P54T E141R",2
"lib2","SARS-CoV-2","CAACCAAAACGAAAAA",10,117.65,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V37T Y175L R179G",3
"lib2","SARS-CoV-2","CAACCAAAATGATTTA",1,15.72,6.14,-4.69,0.9,1.5,1.13,0.02,">1 nonsynonymous","C49P N58F D90K A105D",4
"lib2","SARS-CoV-2","CAACCAAATAGAAAAA",1,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99I T170M",2
"lib2","SARS-CoV-2","CAACCAACGCTCACTA",6,126.69,10.85,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACCAACTATCCGGT",9,58.68,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A14S Q84L I88H P161I",4
"lib2","SARS-CoV-2","CAACCAAGCATATTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","R16T I88T G117A G174D L183*",5
"lib2","SARS-CoV-2","CAACCAAGGAAAATTT",11,1.6,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","CAACCAAGTATTTGAT",4,52.63,9.94,-0.89,0.11,2.18,1.03,0.01,">1 nonsynonymous","T3M S45L",2
"lib2","SARS-CoV-2","CAACCACAACACGATT",2,17.27,7.42,-3.42,0.35,1.5,1.2,0.03,">1 nonsynonymous","F8K D59E A89P",3
"lib2","SARS-CoV-2","CAACCACAAGCCGCAA",1,1.39,NA,NA,NA,NA,NA,NA,"stop","N1P V52S D112C Y121P K198*",5
"lib2","SARS-CoV-2","CAACCACAATATAATC",7,55.15,6,-4.84,1.83,3,1.09,0,">1 nonsynonymous","A14W F44L A105D Y175K",4
"lib2","SARS-CoV-2","CAACCACATGAACATA",5,48.19,6.6,-4.23,0.38,1.5,1.14,0.02,">1 nonsynonymous","E10T K94V G152H F156M",4
"lib2","SARS-CoV-2","CAACCACATTTTGTCC",1,17.09,9.38,-1.45,0.08,2.05,1.05,0,">1 nonsynonymous","F8V V37A I138L T148Q G152I",5
"lib2","SARS-CoV-2","CAACCACCACTACACG",7,9.13,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S41Y P54F Q84V F99L V182H",5
"lib2","SARS-CoV-2","CAACCACCAGCCGGCT",3,70.66,10.81,-0.03,0.06,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACCACCATCCATGG",3,17.47,10.78,-0.06,0.07,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACCACCCCCATCAA",10,186.93,9.82,-1.02,0.04,2.86,1.07,0,">1 nonsynonymous","A33S Y119R",2
"lib2","SARS-CoV-2","CAACCACCTCCAAGAT",9,74.25,6,-4.84,2,3,1.2,0,">1 nonsynonymous","V77L F99P E141S",3
"lib2","SARS-CoV-2","CAACCACGTCCGGTAT",1,1.43,NA,NA,NA,NA,NA,NA,"stop","A33N C49W G174P T201*",4
"lib2","SARS-CoV-2","CAACCACTAACCGTCC",7,92.77,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C31K I80E E141S",3
"lib2","SARS-CoV-2","CAACCACTATCAATGG",11,68.48,7.04,-3.79,0.44,1.5,1.14,0.04,">1 nonsynonymous","F8S D112Y",2
"lib2","SARS-CoV-2","CAACCACTGGATAAAC",8,246.97,10.83,-0.01,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACCACTTATTGTAC",7,107.9,10.78,-0.05,0.03,2.94,1.07,0,">1 nonsynonymous","G9S D98T",2
"lib2","SARS-CoV-2","CAACCAGACTAGCCAG",1,24.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12K A33Q T55P L95Q",4
"lib2","SARS-CoV-2","CAACCAGATATAGATA",11,85.77,10.08,-0.76,0.07,2.69,1.02,0,">1 nonsynonymous","Q84S D97R K132T N151V",4
"lib2","SARS-CoV-2","CAACCAGATTACCCCA",1,10.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V65Q I88M N130L",3
"lib2","SARS-CoV-2","CAACCAGCATCTATTA",1,13.95,9.1,-1.74,0.15,1.73,1.11,0.01,">1 nonsynonymous","D34S Y91Q",2
"lib2","SARS-CoV-2","CAACCAGCGATACAAT",5,37.07,8.82,-2.01,0.1,2.24,1.08,0,">1 nonsynonymous","I2M Y165V",2
"lib2","SARS-CoV-2","CAACCAGGAAATCTCC",13,175.19,10.83,0,0.05,2.87,1.14,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","CAACCAGGTAGTATGG",3,13.84,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","W23K K87N",2
"lib2","SARS-CoV-2","CAACCAGTATGTCGGA",2,25.72,7.48,-3.36,0.48,1.5,1,0.04,">1 nonsynonymous","A145C E154D L162H",3
"lib2","SARS-CoV-2","CAACCAGTGGCTGGAT",13,170.53,9.83,-1.01,0.04,2.97,1.05,0,">1 nonsynonymous","K48R K114N G174T",3
"lib2","SARS-CoV-2","CAACCAGTGTATTTGA",3,15.08,10.76,-0.08,0.08,2.8,1.23,0,">1 nonsynonymous","C61S V153Q",2
"lib2","SARS-CoV-2","CAACCAGTTAGAATAT",1,7.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y I138F G174S",3
"lib2","SARS-CoV-2","CAACCAGTTTTCAAAT",8,72.2,8.55,-2.29,0.13,1.98,1.15,0.01,">1 nonsynonymous","L5N C31M G116R N120W",4
"lib2","SARS-CoV-2","CAACCATAACGCTAAC",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107M Y119V",2
"lib2","SARS-CoV-2","CAACCATAGAGAGTAT",7,31.03,7.64,-3.19,0.27,1.5,1.11,0.03,">1 nonsynonymous","A14E V65F N107K G155S",4
"lib2","SARS-CoV-2","CAACCATAGCCCACCC",12,59.16,10.69,-0.15,0.03,2.95,1.05,0,"1 nonsynonymous","S29W",1
"lib2","SARS-CoV-2","CAACCATAGGAAGTAG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","C31* R73N I80L G86N L131I",5
"lib2","SARS-CoV-2","CAACCATCATAATAAT",4,69.81,10.64,-0.19,0.04,2.92,1.07,0,">1 nonsynonymous","G9S V37C T85V L122Y",4
"lib2","SARS-CoV-2","CAACCATCGAAAACTA",4,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y Y66L T201V",3
"lib2","SARS-CoV-2","CAACCATGACTGATCG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","S53P S113* L122K",3
"lib2","SARS-CoV-2","CAACCATTAAAAAACT",8,129.26,10.8,-0.04,0.04,2.86,1.13,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","CAACCCAAAGGTAACG",4,2.25,NA,NA,NA,NA,NA,NA,"stop","V37A C61* Q163Y",3
"lib2","SARS-CoV-2","CAACCCAAATTAAAAC",3,128.7,10.25,-0.58,0.06,2.61,1.08,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","CAACCCAACAATAATA",3,25.46,9.95,-0.89,0.1,2.81,1.08,0,">1 nonsynonymous","L60M Y121V",2
"lib2","SARS-CoV-2","CAACCCAACAGGTTAC",4,52.72,10.33,-0.51,0.08,2.8,1.06,0,">1 nonsynonymous","Y91L V153W",2
"lib2","SARS-CoV-2","CAACCCAATGAGCCTA",2,16.11,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","I2S N92R N107H Q168F P177S",5
"lib2","SARS-CoV-2","CAACCCAATTCTACAA",1,9.96,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G9A L60H S69P N107Y",4
"lib2","SARS-CoV-2","CAACCCACACAGTCCC",7,80.19,10.72,-0.12,0.05,2.93,1.04,0,">1 nonsynonymous","G83Q T201S",2
"lib2","SARS-CoV-2","CAACCCAGGTATATAA",8,113.61,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8S L57Q Y93S D97E Q176T T201V",6
"lib2","SARS-CoV-2","CAACCCAGTACTCAAG",4,7.89,6,-4.84,2,1.5,1.3,0.03,"1 nonsynonymous","L95D",1
"lib2","SARS-CoV-2","CAACCCATAAATTACT",2,20.7,6.94,-3.89,0.3,2.11,1.12,0.02,">1 nonsynonymous","E10R K26T N171K",3
"lib2","SARS-CoV-2","CAACCCATAGCTTTAC",3,127.71,10.76,-0.07,0.05,2.94,1.09,0,">1 nonsynonymous","R78S A190T",2
"lib2","SARS-CoV-2","CAACCCATATAAAGTG",13,125.3,8.78,-2.06,0.06,2.94,1.1,0,">1 nonsynonymous","P54I T148I G166Y",3
"lib2","SARS-CoV-2","CAACCCCAGACCATGT",4,91.25,9.61,-1.23,0.04,2.91,1.1,0,">1 nonsynonymous","K26R R78S K87D T201L",4
"lib2","SARS-CoV-2","CAACCCCAGCAAATCA",2,48.04,9.98,-0.86,0.08,2.08,1.07,0,">1 nonsynonymous","T3N G51C",2
"lib2","SARS-CoV-2","CAACCCCCAAATTTAC",9,137.17,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","R127T Y175L",2
"lib2","SARS-CoV-2","CAACCCCTACACAATA",4,27.48,7.83,-3.01,0.42,1.5,1.05,0.07,">1 nonsynonymous","S19T Y165F",2
"lib2","SARS-CoV-2","CAACCCGAAAAACGTT",6,56.21,10.77,-0.07,0.06,2.9,1.1,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","CAACCCGACGGAAAAA",3,14.42,10.75,-0.09,0.09,3,1,0,">1 nonsynonymous","P54R T100H",2
"lib2","SARS-CoV-2","CAACCCGATATTGTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","V37I F47* D97R",3
"lib2","SARS-CoV-2","CAACCCGCTACTAACT",4,13.13,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E135G C150W V181S G196W",4
"lib2","SARS-CoV-2","CAACCCGGTAACATAT",1,19.33,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","P7G Q79L N107T T140I",4
"lib2","SARS-CoV-2","CAACCCGTTAATTGGC",4,59.65,9.17,-1.67,0.1,2.11,1.1,0,">1 nonsynonymous","N107V L131I",2
"lib2","SARS-CoV-2","CAACCCTAATAACTCA",14,3.3,NA,NA,NA,NA,NA,NA,"stop","E10* G101R S129C",3
"lib2","SARS-CoV-2","CAACCCTACACCGTAA",8,189.61,10.76,-0.08,0.05,2.97,1.06,0,"1 nonsynonymous","T63V",1
"lib2","SARS-CoV-2","CAACCGAACTAATGCC",2,7.06,10.31,-0.52,0.05,3,1,0,"1 nonsynonymous","K132H",1
"lib2","SARS-CoV-2","CAACCGAATACCGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59V D90I G146* Y165A",4
"lib2","SARS-CoV-2","CAACCGAATGATGTTC",4,23.06,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","S19T V52P Q84K G116T G117S C158F T170W",7
"lib2","SARS-CoV-2","CAACCGACATACTGCA",10,32.09,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93S V115F",2
"lib2","SARS-CoV-2","CAACCGACCCTGACCA",9,6.77,7.31,-3.53,1.01,1.5,1.24,0.04,">1 nonsynonymous","D34T N58I L95V E141I",4
"lib2","SARS-CoV-2","CAACCGACGAGGGGCA",5,60.87,7.68,-3.15,0.17,1.5,1.06,0.01,">1 nonsynonymous","D75I D90N G155V",3
"lib2","SARS-CoV-2","CAACCGAGCGTTCATT",2,16.04,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S19W Y35G A81M F99Q I142M",5
"lib2","SARS-CoV-2","CAACCGATAATATCAG",6,73.23,6,-4.84,0.94,1.5,1.16,0.01,">1 nonsynonymous","N92T G155N F167T",3
"lib2","SARS-CoV-2","CAACCGATAATTAAGT",23,321.12,10.62,-0.21,0.04,2.91,1.08,0,"1 nonsynonymous","A42C",1
"lib2","SARS-CoV-2","CAACCGATTCACATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L57* S69Q",2
"lib2","SARS-CoV-2","CAACCGCCTGACGCGT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","G9* C49K P96T S139H V182R",5
"lib2","SARS-CoV-2","CAACCGCTCGGCCTTT",15,5.86,NA,NA,NA,NA,NA,NA,"stop","V32G V77*",2
"lib2","SARS-CoV-2","CAACCGGAATAACATA",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127S E135H P161L S200F",4
"lib2","SARS-CoV-2","CAACCGGACCAGGCAG",2,12.63,8.47,-2.36,0.22,1.51,1.07,0.03,">1 nonsynonymous","K94P S200T",2
"lib2","SARS-CoV-2","CAACCGGGTACTCGCT",13,182.76,10.87,0.03,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACCGGTAATCTGTC",3,85.09,10.87,0.03,0.05,2.94,1.06,0,"1 nonsynonymous","R16V",1
"lib2","SARS-CoV-2","CAACCGTAATAATTTT",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M K94Y",2
"lib2","SARS-CoV-2","CAACCGTACCAAAGAA",2,29.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35G Y91W F99K G166L",4
"lib2","SARS-CoV-2","CAACCGTCGACTAAGA",7,57.09,10.7,-0.14,0.07,2.95,1.07,0,"1 nonsynonymous","S43P",1
"lib2","SARS-CoV-2","CAACCGTTATGTCTCC",7,35.3,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F62T P82R T148A G174K",4
"lib2","SARS-CoV-2","CAACCTAAAAAGAGAG",9,63.77,10.43,-0.41,0.06,2.88,1.12,0,">1 nonsynonymous","C61H L122A R136K F160C",4
"lib2","SARS-CoV-2","CAACCTAAAAATACCT",2,18.72,10.63,-0.2,0.05,2.87,1.16,0,">1 nonsynonymous","S41A N64S",2
"lib2","SARS-CoV-2","CAACCTAAAATTCGGT",6,79.12,10.86,0.02,0.07,2.94,1.07,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","CAACCTAAACTAGATT",5,2.65,NA,NA,NA,NA,NA,NA,"stop","G86I Y123L N151* P161S A192M",5
"lib2","SARS-CoV-2","CAACCTAAGCTACGAT",4,28.89,10.35,-0.49,0.05,2.92,1.08,0,">1 nonsynonymous","D98C S147H",2
"lib2","SARS-CoV-2","CAACCTAAGTAACGAA",5,145.14,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A89G P149S P177G T201V",4
"lib2","SARS-CoV-2","CAACCTAATAAAAAAG",1,28.69,6,-4.84,2,3,1.09,0,">1 nonsynonymous","S19R V32L A67T K87T G152S C158F",6
"lib2","SARS-CoV-2","CAACCTAATACCTAGT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L F167V",2
"lib2","SARS-CoV-2","CAACCTACAAGAACCA",1,15.63,7.65,-3.18,0.39,1.5,1.09,0.03,">1 nonsynonymous","F167H K198S",2
"lib2","SARS-CoV-2","CAACCTACCAGAATAG",5,23.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2T P96L Y165C T201Q",4
"lib2","SARS-CoV-2","CAACCTACCGTCTATT",7,7.22,NA,NA,NA,NA,NA,NA,"stop","V77F T100W A105L Q144* P149M",5
"lib2","SARS-CoV-2","CAACCTACGCTTAACT",5,53.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S43G T85M T170R Q176L",4
"lib2","SARS-CoV-2","CAACCTACTAGATATG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N R136S",2
"lib2","SARS-CoV-2","CAACCTACTCTAATTG",6,160.03,10.71,-0.12,0.03,2.95,1.05,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","CAACCTAGAAACCACT",6,41.74,9.7,-1.13,0.06,2.06,1.03,0,">1 nonsynonymous","W106T E141A",2
"lib2","SARS-CoV-2","CAACCTAGGGACTCAT",7,62.36,6,-4.84,2,3,1.07,0,">1 nonsynonymous","N4T F99I G166D",3
"lib2","SARS-CoV-2","CAACCTATTTGGAAGT",5,153.02,9.65,-1.19,0.05,2.76,1.09,0,">1 nonsynonymous","K87S R136L",2
"lib2","SARS-CoV-2","CAACCTCAAGTTAGCA",9,33.04,6.09,-4.75,1.65,1.5,1.27,0.05,">1 nonsynonymous","N64Y P82D",2
"lib2","SARS-CoV-2","CAACCTCAGCTGATCC",1,5.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98G S147P S164G",3
"lib2","SARS-CoV-2","CAACCTCATAGTAAAG",5,49.73,8.42,-2.41,0.13,3,1.03,0.01,"1 nonsynonymous","F126S",1
"lib2","SARS-CoV-2","CAACCTCATCTTTGAA",9,104.67,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","E10R Y119L G172L R179S",4
"lib2","SARS-CoV-2","CAACCTCCACTGAGCA",2,69.31,10.4,-0.43,0.06,2.88,1.1,0,">1 nonsynonymous","V37D S45Y",2
"lib2","SARS-CoV-2","CAACCTCCCAACGGTA",2,13.33,8.55,-2.28,0.27,1.5,1,0.04,">1 nonsynonymous","N1W N30V E135S",3
"lib2","SARS-CoV-2","CAACCTCTGGGTACCG",3,87,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9T I28A R78S Q79T Q176S",5
"lib2","SARS-CoV-2","CAACCTGAACCGCAGA",3,20.7,6.08,-4.76,1.25,1.5,1.09,0.04,">1 nonsynonymous","I104R F160C",2
"lib2","SARS-CoV-2","CAACCTGAGGGCGGAG",1,14.21,6,-4.84,2,3,1.07,0,">1 nonsynonymous","T15N K87L P161L",3
"lib2","SARS-CoV-2","CAACCTGATTTGGTTT",1,23.44,10.9,0.06,0.08,2.86,1.13,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","CAACCTTCAATAATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103D T148L",2
"lib2","SARS-CoV-2","CAACCTTCACGCTGCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56V I104R P169S",3
"lib2","SARS-CoV-2","CAACCTTCACTCCACT",3,28.84,7.44,-3.39,0.3,1.5,1.18,0.06,">1 nonsynonymous","A33C L60A V103L",3
"lib2","SARS-CoV-2","CAACCTTGACGATCAG",14,103.27,6.98,-3.86,0.11,1.5,1.11,0,">1 nonsynonymous","T55N R179A",2
"lib2","SARS-CoV-2","CAACCTTGGCCACACT",4,50.45,7.97,-2.87,0.28,1.5,1.09,0.03,">1 nonsynonymous","A14D A89F",2
"lib2","SARS-CoV-2","CAACCTTTAATCTATC",5,56.6,6.17,-4.66,0.48,2.26,1.25,0.01,"1 nonsynonymous","L162D",1
"lib2","SARS-CoV-2","CAACCTTTGAATTTGT",11,65.65,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","K128F A145K G155L Y165L",4
"lib2","SARS-CoV-2","CAACGAAAATTAAGTA",12,85.44,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y66M V71L F99I C102S K132T H189L",6
"lib2","SARS-CoV-2","CAACGAAAGGAATAAT",7,19.28,10.8,-0.03,0.07,2.83,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGAAAGTAAAGTT",10,138.91,10.89,0.05,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGAAATAAGCTGC",3,21.61,10.4,-0.44,0.13,2.52,1.02,0.01,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","CAACGAAATCAAGACT",4,107,7.8,-3.04,0.18,1.64,1.11,0.01,">1 nonsynonymous","F44L Y159N T201L",3
"lib2","SARS-CoV-2","CAACGAACCACTACGG",2,52.85,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y39R K87S N107L L122K R179S",5
"lib2","SARS-CoV-2","CAACGAACCTGTATAT",10,30.59,7.87,-2.97,0.12,1.78,1.05,0.01,">1 nonsynonymous","D59V S113T E141F F160Y",4
"lib2","SARS-CoV-2","CAACGAACGCTTGACC",12,118.27,10.42,-0.42,0.04,2.86,1.09,0,">1 nonsynonymous","S139H F160S",2
"lib2","SARS-CoV-2","CAACGAACGGGATAAC",1,69,10.44,-0.4,0.05,2.84,1.04,0,">1 nonsynonymous","S45A D98G",2
"lib2","SARS-CoV-2","CAACGAACGGTCATTA",1,30.1,10.87,0.04,0.09,2.96,1.05,0,">1 nonsynonymous","T55A K199S",2
"lib2","SARS-CoV-2","CAACGAAGCTGACAAA",5,36.53,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A22G V32M F44D K56L F134S",5
"lib2","SARS-CoV-2","CAACGAAGCTGTAAAA",5,74.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19V N157A Y175E",3
"lib2","SARS-CoV-2","CAACGAAGGCCTTCTT",6,91.34,10.59,-0.25,0.06,2.85,1.14,0,">1 nonsynonymous","L5N E135G L188V",3
"lib2","SARS-CoV-2","CAACGAATTGCACTAC",11,94.21,6,-4.84,1.08,1.5,1.19,0.01,">1 nonsynonymous","L95M F99R P133L",3
"lib2","SARS-CoV-2","CAACGACCCATACTAC",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P N157K R179G",3
"lib2","SARS-CoV-2","CAACGACCTAACATCG",4,14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33D P82K Y143N",3
"lib2","SARS-CoV-2","CAACGACGACACCAAT",6,44.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G74Y W106N V115R K128T S139V",5
"lib2","SARS-CoV-2","CAACGACGGTATTGAG",13,167.03,9.37,-1.47,0.03,2.9,1.09,0,"1 nonsynonymous","Y119M",1
"lib2","SARS-CoV-2","CAACGACGTACTCATC",4,17.79,6.7,-4.13,0.33,1.79,1.13,0.01,">1 nonsynonymous","P96V G174P A190V",3
"lib2","SARS-CoV-2","CAACGACTGTCCTCAA",4,17.03,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16G T55F R127I",3
"lib2","SARS-CoV-2","CAACGAGACCATTATA",11,1.09,NA,NA,NA,NA,NA,NA,"stop","D34H P133*",2
"lib2","SARS-CoV-2","CAACGAGACCCAAACT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAACGAGCAACAACGG",4,70.94,10.97,0.14,0.05,2.91,1.1,0,">1 nonsynonymous","L122K S129L",2
"lib2","SARS-CoV-2","CAACGAGGACTCCAAA",5,85.38,10.3,-0.54,0.05,2.92,1.06,0,">1 nonsynonymous","S41T T100I P169V",3
"lib2","SARS-CoV-2","CAACGAGGGCCAAATA",23,5.16,NA,NA,NA,NA,NA,NA,"stop","Y165M V173*",2
"lib2","SARS-CoV-2","CAACGAGGTATATGGA",5,21.75,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N30D F99P W106S F134S N157K C158K",6
"lib2","SARS-CoV-2","CAACGAGTCGATTCCA",2,22.92,8.82,-2.02,0.1,2.74,1.13,0.01,">1 nonsynonymous","S19A Y119M S200E",3
"lib2","SARS-CoV-2","CAACGAGTGCTAGCAG",5,88.73,6,-4.84,2,3,1.17,0,">1 nonsynonymous","P7T D90I N107W R124G G152C",5
"lib2","SARS-CoV-2","CAACGATAGACACTAT",4,40.95,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9M Y93H",2
"lib2","SARS-CoV-2","CAACGATATTACAAGC",6,81.52,10.3,-0.54,0.08,2.33,1.01,0,">1 nonsynonymous","W106G L122R",2
"lib2","SARS-CoV-2","CAACGATTAAGACCAT",6,72.49,10.43,-0.4,0.06,2.88,1.04,0,">1 nonsynonymous","L5P S69F",2
"lib2","SARS-CoV-2","CAACGATTACACTCCG",4,82.05,9.89,-0.94,0.12,2.32,1.06,0.01,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","CAACGCAAAAAAAGCA",2,90.36,10.28,-0.55,0.05,2.91,1.06,0,">1 nonsynonymous","T3D D59V",2
"lib2","SARS-CoV-2","CAACGCATATTGCAGT",4,18.53,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","G86S I104S G146T",3
"lib2","SARS-CoV-2","CAACGCATGATCCATA",1,9.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V R16C N107K R136I R179T",5
"lib2","SARS-CoV-2","CAACGCATTTTAGACG",8,147.01,10.36,-0.47,0.05,2.93,1.03,0,">1 nonsynonymous","F62V F134C",2
"lib2","SARS-CoV-2","CAACGCCATAGATATG",8,2.05,NA,NA,NA,NA,NA,NA,"stop","S43I N64S E186*",3
"lib2","SARS-CoV-2","CAACGCCCACATCCCC",2,33.52,10.51,-0.32,0.04,2.97,1.04,0,">1 nonsynonymous","E141Y P149S",2
"lib2","SARS-CoV-2","CAACGCCGGCCGAGCA",4,20.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61S F99S",2
"lib2","SARS-CoV-2","CAACGCCGTAATTTAC",3,68.29,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R27E L95G C150Y",3
"lib2","SARS-CoV-2","CAACGCGAACACTCGG",5,75.54,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35M L95K",2
"lib2","SARS-CoV-2","CAACGCGATTTACTCT",1,6.92,7.41,-3.42,0.39,1.5,1.11,0.04,">1 nonsynonymous","G86R V115A",2
"lib2","SARS-CoV-2","CAACGCGCTGCCTCGA",2,42.1,10.73,-0.11,0.04,3,1.03,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","CAACGCGGATGGAGAT",2,20.1,10.28,-0.56,0.04,3,1.01,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","CAACGCGGATTAACAA",10,31.48,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F12S S45I G83I T201L",4
"lib2","SARS-CoV-2","CAACGCGGTCGGGCTG",5,51.01,7.71,-3.12,0.3,1.5,1.12,0.02,">1 nonsynonymous","Q84N Q176L",2
"lib2","SARS-CoV-2","CAACGCTAGAATATCC",3,40.4,10.82,-0.02,0.06,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGCTCATACACAC",5,9.68,9.8,-1.04,0.22,1.96,1,0.03,">1 nonsynonymous","I72L V182C",2
"lib2","SARS-CoV-2","CAACGCTGGGTAAGAC",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T T63E Y119N S164R",4
"lib2","SARS-CoV-2","CAACGCTTAAACCTAA",2,5.89,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","Y39G G83M P149V Q168V V173S S184F",6
"lib2","SARS-CoV-2","CAACGCTTGAAACCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60G V71* N171S",3
"lib2","SARS-CoV-2","CAACGCTTGACCCCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V20P C61I D90*",3
"lib2","SARS-CoV-2","CAACGCTTGACTTTAA",1,10.39,9.55,-1.28,0.25,1.83,1.02,0.01,"1 nonsynonymous","W23V",1
"lib2","SARS-CoV-2","CAACGCTTTGACCCGA",1,27.61,8.9,-1.93,0.1,2.15,1.05,0,">1 nonsynonymous","D98L I142S",2
"lib2","SARS-CoV-2","CAACGGAAATATGACA",3,13.31,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y39I C49T G86F P96Y",4
"lib2","SARS-CoV-2","CAACGGAATCGGACTG",1,36.05,9.12,-1.71,0.07,2.91,1.07,0,">1 nonsynonymous","R27V G146M",2
"lib2","SARS-CoV-2","CAACGGATAAGTCTAT",7,48.78,10.88,0.05,0.06,2.95,1.09,0,">1 nonsynonymous","P7K P197I",2
"lib2","SARS-CoV-2","CAACGGATTTTAATAT",1,5.64,10.59,-0.24,0.11,3,1,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","CAACGGCTGTCAGGCA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","L5P F156*",2
"lib2","SARS-CoV-2","CAACGGGAATGACCAC",4,1.93,NA,NA,NA,NA,NA,NA,"stop","G83* K198C",2
"lib2","SARS-CoV-2","CAACGGGTAAACTATA",2,22.33,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F8A F134L N157V A190T",4
"lib2","SARS-CoV-2","CAACGGTCCAACAATT",2,41.22,10.71,-0.12,0.05,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGGTCTAAATATA",4,71.93,9.8,-1.03,0.08,2.34,1.04,0,">1 nonsynonymous","E135V E154N",2
"lib2","SARS-CoV-2","CAACGGTGATGCCCTA",13,64.39,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T15I P96G F167V",3
"lib2","SARS-CoV-2","CAACGGTTACTACAGA",1,8.59,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I2T R16S A67H R127L F156P",5
"lib2","SARS-CoV-2","CAACGTAAAAGTATAC",12,236.83,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25E L38V D59S E154V V173T",5
"lib2","SARS-CoV-2","CAACGTAACCTCGACC",13,192.52,10.22,-0.62,0.03,2.86,1.04,0,"1 nonsynonymous","Y35E",1
"lib2","SARS-CoV-2","CAACGTAACTTAAAAT",3,22.3,7.78,-3.06,0.33,1.5,1.09,0.04,">1 nonsynonymous","V65L P96I",2
"lib2","SARS-CoV-2","CAACGTACAGCCTCTG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123T N130F P149R",3
"lib2","SARS-CoV-2","CAACGTACGAAGTACA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P Y143K",2
"lib2","SARS-CoV-2","CAACGTACGGACTAAA",6,55.48,8.52,-2.31,0.15,2.6,1.06,0.01,">1 nonsynonymous","A14L Y119S K198P",3
"lib2","SARS-CoV-2","CAACGTATGCAACTAA",16,102.75,9.43,-1.4,0.07,1.85,1.02,0,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","CAACGTATGTCCTCGC",6,84.8,8.54,-2.29,0.11,1.9,1.13,0,">1 nonsynonymous","N13C Y35L Y121K",3
"lib2","SARS-CoV-2","CAACGTCAAATATATC",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107A D137K",2
"lib2","SARS-CoV-2","CAACGTCAGAGGCCTT",4,55.45,8.52,-2.31,0.09,2.58,1.11,0,">1 nonsynonymous","I2L C61Y D98E G174V",4
"lib2","SARS-CoV-2","CAACGTCCAAAAATAG",13,333.12,9.5,-1.33,0.02,2.94,1.07,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","CAACGTCCGCTAAACC",3,54.51,10.91,0.07,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGTCCTAGTGTTG",10,109.97,9.84,-0.99,0.06,2.24,1.06,0,">1 nonsynonymous","L5A V11D",2
"lib2","SARS-CoV-2","CAACGTCCTTATATTA",24,41.03,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D34F A89R",2
"lib2","SARS-CoV-2","CAACGTCCTTGGCGCA",5,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K D97L N171P V180T",4
"lib2","SARS-CoV-2","CAACGTGAAAACGGCA",5,20.37,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S19F W106G T148D T201G",4
"lib2","SARS-CoV-2","CAACGTGAAGCCTGAT",2,15.57,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T15V F126P G174P",3
"lib2","SARS-CoV-2","CAACGTGACACGAATT",9,106.99,9.72,-1.11,0.08,2.06,1.09,0,">1 nonsynonymous","F8C N64Q",2
"lib2","SARS-CoV-2","CAACGTGACCCATCCA",14,20.09,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","D34N G51V Q84L D97W V103W N120S F160N",7
"lib2","SARS-CoV-2","CAACGTGAGTTTAGAA",4,18.88,10.91,0.07,0.07,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGTGCCTGTCATA",5,39.65,8.73,-2.1,0.27,1.5,1.01,0.04,">1 nonsynonymous","V11I S69L S139I",3
"lib2","SARS-CoV-2","CAACGTGCTATGACAA",1,14.45,6.04,-4.79,1.16,1.5,1.25,0.03,"1 nonsynonymous","P82W",1
"lib2","SARS-CoV-2","CAACGTGGAATACGGC",6,105.19,6,-4.84,1.8,1.5,1.19,0.01,">1 nonsynonymous","N40T Y66S Y91M R127V",4
"lib2","SARS-CoV-2","CAACGTGTCTCATCTA",19,203.37,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","R25C G83T K94E F99S C158L V173I",6
"lib2","SARS-CoV-2","CAACGTTAAATACTAA",3,62.33,7.25,-3.59,0.44,1.5,1.25,0.05,">1 nonsynonymous","K94D I104V P177H",3
"lib2","SARS-CoV-2","CAACGTTAACTAACAG",5,69.79,10.83,-0.01,0.06,2.98,1.02,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","CAACGTTAAGACTATC",1,15.98,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P7N D59M P96Y I104P K128G T140Q",6
"lib2","SARS-CoV-2","CAACGTTAAGATTCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib2","SARS-CoV-2","CAACGTTACTCCAAAC",2,32.98,10.36,-0.48,0.04,2.97,1.03,0,">1 nonsynonymous","E10G T85S L122S A145T",4
"lib2","SARS-CoV-2","CAACGTTAGTATGTTC",2,36.75,10.75,-0.09,0.06,2.86,1.13,0,"1 nonsynonymous","A42H",1
"lib2","SARS-CoV-2","CAACGTTCCGAAACGG",11,189.52,10.88,0.05,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACGTTCTACAATAT",29,540.4,9.76,-1.08,0.05,2.12,1.05,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","CAACGTTGAAATATCG",1,8.95,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y93V N151D F156M",3
"lib2","SARS-CoV-2","CAACGTTGCTAAGATA",3,60.9,10.73,-0.11,0.03,2.98,1.04,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","CAACGTTTCACATCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5S V11H K132V L162*",4
"lib2","SARS-CoV-2","CAACTAAAAACCCGTT",5,110.48,8,-2.83,0.11,1.94,1.06,0,">1 nonsynonymous","T55L Q84N Y119E V173G",4
"lib2","SARS-CoV-2","CAACTAAAAGAATATT",1,21.84,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E76I T85K K87H Y143V",4
"lib2","SARS-CoV-2","CAACTAAATAAGAAGT",2,56.83,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","S36I C49P P161V",3
"lib2","SARS-CoV-2","CAACTAAATAAGTTCG",19,3.99,NA,NA,NA,NA,NA,NA,"stop","W23* C49P T55* P96A Y143E",5
"lib2","SARS-CoV-2","CAACTAAATAATTAGA",8,83.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60A L162Q G172R",3
"lib2","SARS-CoV-2","CAACTAACAAATCAAA",8,29.56,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13D L95R G116M",3
"lib2","SARS-CoV-2","CAACTAACAACTTCAA",1,34.21,9.02,-1.81,0.05,3,1,0,">1 nonsynonymous","N64A T170V",2
"lib2","SARS-CoV-2","CAACTAACAAGGGTTA",6,0.21,NA,NA,NA,NA,NA,NA,"stop","S43R Y50P N64V K94L G152K Q176L P197*",7
"lib2","SARS-CoV-2","CAACTAACACAATGCA",3,15.58,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50F F62R D90W A105M",4
"lib2","SARS-CoV-2","CAACTAACTCTGAATC",1,25.75,8.3,-2.53,0.18,2.19,1.02,0.02,">1 nonsynonymous","A22M A145R E154F",3
"lib2","SARS-CoV-2","CAACTAACTGCGTGCG",6,22.07,6.56,-4.27,0.39,1.5,1.11,0.02,">1 nonsynonymous","T3H E10I P149S G155L P169N T201Q",6
"lib2","SARS-CoV-2","CAACTAAGATCTATAC",4,224.77,10.64,-0.2,0.02,2.98,1.02,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","CAACTAAGCGTGCAAC",2,26.82,8.85,-1.98,0.16,1.76,1.03,0.01,">1 nonsynonymous","C6R A14I T55A V173G",4
"lib2","SARS-CoV-2","CAACTAAGGTCCAGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","W106* P197S",2
"lib2","SARS-CoV-2","CAACTAATAGAGCTCA",5,7.56,NA,NA,NA,NA,NA,NA,"stop","G9* Y50A L60M G74H Y175I",5
"lib2","SARS-CoV-2","CAACTAATCGCCCGCA",3,72.7,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P82L E135A P177R",3
"lib2","SARS-CoV-2","CAACTAATTTAAAACT",3,24.11,10.24,-0.6,0.12,2.79,1.03,0.01,">1 nonsynonymous","G9T K56V K132I",3
"lib2","SARS-CoV-2","CAACTACAAATAAAGT",9,52.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N64R E76N Q176C",3
"lib2","SARS-CoV-2","CAACTACACGCAATCT",1,7.35,10.94,0.11,0.11,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACTACACGTACGTA",10,61.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16K Y39S N107L K114F",4
"lib2","SARS-CoV-2","CAACTACACTTACATA",1,27.35,9.88,-0.95,0.11,2.51,1.08,0.01,">1 nonsynonymous","F47L L57G",2
"lib2","SARS-CoV-2","CAACTACACTTCCCTT",2,8.04,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D34M S43N T100P G146S G152S G166Q",6
"lib2","SARS-CoV-2","CAACTACCGCGGTTAG",1,77.03,10.26,-0.58,0.03,2.88,1.04,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CAACTACCTAATGACA",2,28.87,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I2Q G9L N40S I80S Q84L G101T Q176T T201C",8
"lib2","SARS-CoV-2","CAACTACGAATAGACT",10,92.61,9.7,-1.13,0.09,2,1.03,0,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","CAACTACGCTACTTAC",6,159.6,10.7,-0.14,0.03,2.91,1.07,0,">1 nonsynonymous","S45D I138R",2
"lib2","SARS-CoV-2","CAACTACGGTAAAATA",5,0,NA,NA,NA,NA,NA,NA,"stop","N1Q T15* A89Q D98V K132V",5
"lib2","SARS-CoV-2","CAACTACTATTGCGCC",5,199.35,6.9,-3.94,0.31,1.5,1.17,0.02,">1 nonsynonymous","N4T Y175P",2
"lib2","SARS-CoV-2","CAACTAGATAAGAGTG",1,5.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R V103S L122T P133L",4
"lib2","SARS-CoV-2","CAACTAGCAAAGAACT",6,20.66,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9W I72K I142W",3
"lib2","SARS-CoV-2","CAACTAGCATAAACCA",1,16.89,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A33P T85R N107C C150L",4
"lib2","SARS-CoV-2","CAACTAGCTCGCCACT",12,63.27,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T63H K94S F134N T148P",4
"lib2","SARS-CoV-2","CAACTAGGCCAACAAA",1,19.2,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","G86I A145S N151F C195K",4
"lib2","SARS-CoV-2","CAACTAGTTATGACGA",1,25.48,7.48,-3.35,0.21,1.5,1.06,0.02,">1 nonsynonymous","G86C D97A F160R",3
"lib2","SARS-CoV-2","CAACTATAACTAATCA",3,1.24,NA,NA,NA,NA,NA,NA,"stop","E10K A14G S69L V77R L95R N120S I142Y F160T G172* T201P",10
"lib2","SARS-CoV-2","CAACTATAATAATAAT",4,107.36,8.06,-2.78,0.13,1.5,1.06,0.01,">1 nonsynonymous","E141Y Q176R",2
"lib2","SARS-CoV-2","CAACTATACTTTGTAC",3,0.7,NA,NA,NA,NA,NA,NA,"stop","F8H A14V S45*",3
"lib2","SARS-CoV-2","CAACTATGACACGCCA",4,14.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41I P177T",2
"lib2","SARS-CoV-2","CAACTATGCCCTACGT",6,220.46,10.63,-0.21,0.04,2.87,1.13,0,">1 nonsynonymous","L38I C61N",2
"lib2","SARS-CoV-2","CAACTATGCGTACACT",3,6.68,9.88,-0.96,0.27,2.2,1.11,0.01,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","CAACTATTAATGAGAC",7,119.59,10.84,0,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CAACTATTAGTTAATA",3,26.8,10.63,-0.21,0.06,2.92,1.05,0,">1 nonsynonymous","Y39L N120L P149R",3
"lib2","SARS-CoV-2","CAACTCAAAGAAAGAC",1,12.07,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","S69H Y93W",2
"lib2","SARS-CoV-2","CAACTCAAATCAGATG",10,90.22,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3H G9K R27Q D112Q",4
"lib2","SARS-CoV-2","CAACTCAACAGATTAA",30,249.28,6.84,-4,0.36,1.5,1.2,0.03,">1 nonsynonymous","P7R G83R L122P Q168W Y175F",5
"lib2","SARS-CoV-2","CAACTCACTTAGAAAG",5,95.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R73A Y119I G172I",3
"lib2","SARS-CoV-2","CAACTCAGTGCTACGA",11,46.01,6,-4.84,1.34,1.5,1.19,0.02,">1 nonsynonymous","N4S T15R N92M",3
"lib2","SARS-CoV-2","CAACTCATTAAGGCTA",5,33.82,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A18V I104T Y121H S129F",4
"lib2","SARS-CoV-2","CAACTCATTAAGGGAT",7,25.37,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","Y121R G155V F167L",3
"lib2","SARS-CoV-2","CAACTCATTCCAGGTT",1,6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50D T55N",2
"lib2","SARS-CoV-2","CAACTCATTTTTACTA",4,155.72,10.32,-0.51,0.05,2.88,1.1,0,"1 nonsynonymous","Y121I",1
"lib2","SARS-CoV-2","CAACTCCACTCTCAGA",3,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104H G146I",2
"lib2","SARS-CoV-2","CAACTCCGAACACGGA",2,12.02,NA,NA,NA,NA,NA,NA,"stop","Y35M G101L N120S F167*",4
"lib2","SARS-CoV-2","CAACTCCGGTAGATAC",5,40.68,6.38,-4.46,0.8,1.5,1.18,0.04,">1 nonsynonymous","C61G R179M",2
"lib2","SARS-CoV-2","CAACTCCTAACCAAGA",1,14.07,9.97,-0.86,0.1,2.79,1.05,0,">1 nonsynonymous","D90F I104M",2
"lib2","SARS-CoV-2","CAACTCCTAACCACAG",8,58.23,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V37L K94P D112E",3
"lib2","SARS-CoV-2","CAACTCCTACTGTCTA",6,2.97,NA,NA,NA,NA,NA,NA,"stop","L5* F17K L60S",3
"lib2","SARS-CoV-2","CAACTCGAGAACGGGT",3,68.54,10.42,-0.41,0.05,2.93,1.07,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","CAACTCGAGAATACTT",6,98.33,9.38,-1.46,0.14,1.71,1.1,0.01,">1 nonsynonymous","G83L L95T",2
"lib2","SARS-CoV-2","CAACTCGGCATTTGCT",5,1.22,NA,NA,NA,NA,NA,NA,"stop","I2N A89G K94* E154G S200Y",5
"lib2","SARS-CoV-2","CAACTCGGTTATGATT",9,124.4,6.42,-4.42,0.37,1.5,1.19,0.01,">1 nonsynonymous","A22T Y175V",2
"lib2","SARS-CoV-2","CAACTCGTAAACGAAT",14,136.07,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V11S S147L C158R",3
"lib2","SARS-CoV-2","CAACTCTAGTACGTTA",3,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L C61P V77R K94A V103I F156L A190T",7
"lib2","SARS-CoV-2","CAACTCTCACCGGTCA",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L T55G L60W D90Y L183M",5
"lib2","SARS-CoV-2","CAACTCTCCCCTTTAC",10,102.35,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A81R A105Q L122C",3
"lib2","SARS-CoV-2","CAACTCTGAAAAAGGA",1,155.99,8.65,-2.19,0.07,2.95,1.09,0,">1 nonsynonymous","T55Y F126E Q168F",3
"lib2","SARS-CoV-2","CAACTCTGTCAAGTAT",15,64.95,6.5,-4.34,0.29,1.5,1.12,0.01,"1 nonsynonymous","I88W",1
"lib2","SARS-CoV-2","CAACTCTTTACCCCAA",4,20.24,9.8,-1.03,0.11,2.5,1.01,0.01,">1 nonsynonymous","R78W E135Y",2
"lib2","SARS-CoV-2","CAACTGAAAAAGTAGA",4,1.04,NA,NA,NA,NA,NA,NA,"stop","T3Q N64*",2
"lib2","SARS-CoV-2","CAACTGAACATCGAGG",6,62.45,10.7,-0.14,0.06,2.9,1.1,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","CAACTGAAGCAGCTAA",6,23.67,10.83,-0.01,0.07,3,1.03,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","CAACTGAAGCGACGTA",6,66.83,8.38,-2.45,0.13,2.32,1.08,0.01,">1 nonsynonymous","D90W G117D",2
"lib2","SARS-CoV-2","CAACTGACACATACAA",2,14.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V71P G116V",2
"lib2","SARS-CoV-2","CAACTGACTTAACAAA",3,35.77,8.44,-2.4,0.08,2.35,1.02,0,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","CAACTGAGGACAATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* S41P K48S",3
"lib2","SARS-CoV-2","CAACTGATGGATAGCG",6,42.66,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61V Y121R I138V T170R L188W",5
"lib2","SARS-CoV-2","CAACTGATTGTACGGC",11,64.84,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","F8L N13Y Y143S G152H G174W",5
"lib2","SARS-CoV-2","CAACTGCACTCTATTA",2,77.45,10.63,-0.2,0.04,2.98,1,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","CAACTGCAGTCGTTGA",2,61.53,9.88,-0.95,0.09,2.76,1.04,0,">1 nonsynonymous","I2F Y66N I104L G116R K128R",5
"lib2","SARS-CoV-2","CAACTGCCAGTCAAAG",1,20.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P82L Y165F S184F",3
"lib2","SARS-CoV-2","CAACTGCCCTAAAACT",4,25.5,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N40Y A81T S139V",3
"lib2","SARS-CoV-2","CAACTGCCCTACGATA",12,118.18,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L38S L57D D90F V115S",4
"lib2","SARS-CoV-2","CAACTGCCCTCAAAAC",9,10.06,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2H C102P K132T",3
"lib2","SARS-CoV-2","CAACTGCGATAAAATA",5,64.5,10.91,0.07,0.07,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACTGCTAATATAGA",3,32.53,8.58,-2.26,0.09,2.88,1.05,0,">1 nonsynonymous","T170D E186P",2
"lib2","SARS-CoV-2","CAACTGCTCAGATAAA",6,33.32,9.71,-1.13,0.07,2.05,1.13,0,">1 nonsynonymous","A14S V37N P54V F62C S69A T85S",6
"lib2","SARS-CoV-2","CAACTGCTGGTACCTC",4,66.74,10.69,-0.15,0.04,2.9,1.09,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","CAACTGGACACCAAAC",8,49.65,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","I72E T201V",2
"lib2","SARS-CoV-2","CAACTGGCACCCACCA",2,32.38,10.88,0.04,0.04,2.94,1.07,0,">1 nonsynonymous","V37A S53V",2
"lib2","SARS-CoV-2","CAACTGGCCGTTACCT",2,12.82,9.76,-1.08,0.18,1.71,1.1,0.02,"1 nonsynonymous","A67H",1
"lib2","SARS-CoV-2","CAACTGGGCTAACTCT",1,12.39,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","G101L S129R F156V",3
"lib2","SARS-CoV-2","CAACTGGTACCGGGAC",10,68.53,6,-4.84,2,3,1.09,0,">1 nonsynonymous","R16F Y93G S129V S184Q",4
"lib2","SARS-CoV-2","CAACTGGTGTGAATAA",3,109.45,9.74,-1.1,0.07,2.53,1.04,0,">1 nonsynonymous","R27I Y39M A89N Q168A L188H",5
"lib2","SARS-CoV-2","CAACTGTATATAACAT",8,4.22,NA,NA,NA,NA,NA,NA,"stop","L5K S29H S129*",3
"lib2","SARS-CoV-2","CAACTGTTAATACTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","L38* Q144R L183P",3
"lib2","SARS-CoV-2","CAACTGTTCATACATG",5,77.41,10.66,-0.17,0.04,2.97,1.05,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CAACTGTTGAACCATC",4,17.7,8.48,-2.35,0.32,1.5,1,0.04,">1 nonsynonymous","F44N V180A",2
"lib2","SARS-CoV-2","CAACTTAAAACATCAA",1,10.41,10.72,-0.12,0.06,2.99,1.01,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CAACTTAAAAGAGGTA",1,5.59,6.06,-4.78,2,3,1.03,0.01,">1 nonsynonymous","N1M K56F T148H Q176G",4
"lib2","SARS-CoV-2","CAACTTAAATATCTAC",3,11.23,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T46F D90A Y143N",3
"lib2","SARS-CoV-2","CAACTTAACGAGGGTT",23,267.12,8.87,-1.97,0.04,2.83,1.08,0,">1 nonsynonymous","K26C A145F",2
"lib2","SARS-CoV-2","CAACTTAAGGCCCATC",1,19,6.16,-4.68,0.23,3,1.07,0,">1 nonsynonymous","V37E D97I N157A F185A V194I",5
"lib2","SARS-CoV-2","CAACTTAATGGCGGGA",10,178.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86V P177R",2
"lib2","SARS-CoV-2","CAACTTACTTAAAAAC",9,137.58,10.63,-0.21,0.04,2.94,1.05,0,">1 nonsynonymous","S129L E154Q",2
"lib2","SARS-CoV-2","CAACTTACTTAATCCG",11,166.73,8.02,-2.82,0.16,1.71,1.06,0.01,">1 nonsynonymous","V37T E141R F156K L162Y",4
"lib2","SARS-CoV-2","CAACTTAGAGCCACAC",3,0.18,NA,NA,NA,NA,NA,NA,"stop","A33* D59L K87H R124L V153I",5
"lib2","SARS-CoV-2","CAACTTATCCTTATTA",4,195.94,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y39T D90G Y119C P169D P177V",5
"lib2","SARS-CoV-2","CAACTTATCTAACAGG",3,143.71,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12S S36E G172N",3
"lib2","SARS-CoV-2","CAACTTCCAAATGTCT",1,16.69,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C49D K56Q W106R Y119W I138D P149S",6
"lib2","SARS-CoV-2","CAACTTCCATACTACT",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104S S139L V181C",3
"lib2","SARS-CoV-2","CAACTTCCCGGTATAG",3,45.52,10.37,-0.47,0.08,2.92,1.01,0,">1 nonsynonymous","K56Y Y121H",2
"lib2","SARS-CoV-2","CAACTTCGGATACGAA",5,36.76,6,-4.84,1.31,1.7,1.05,0,">1 nonsynonymous","I88E K94R R127L A190V",4
"lib2","SARS-CoV-2","CAACTTCTAATAATTG",4,57.07,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S45A P82Q Y143W",3
"lib2","SARS-CoV-2","CAACTTCTAGAAGAGC",3,60.53,10.69,-0.15,0.05,2.93,1.06,0,">1 nonsynonymous","S43R G116T",2
"lib2","SARS-CoV-2","CAACTTGAACAGATGA",3,214.55,10.88,0.05,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CAACTTGCAGGGAATT",7,0.48,NA,NA,NA,NA,NA,NA,"stop","L57S K87L K132*",3
"lib2","SARS-CoV-2","CAACTTGCATGTGATT",1,21.99,10.35,-0.48,0.09,2.87,1.07,0,">1 nonsynonymous","P54C K128R",2
"lib2","SARS-CoV-2","CAACTTGCCCTGATCA",4,42.59,10.71,-0.13,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACTTGCTTGCCTAT",8,4.47,NA,NA,NA,NA,NA,NA,"stop","G9T N30M V173*",3
"lib2","SARS-CoV-2","CAACTTGTAAAACCAG",5,40.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9P N92L N118S K128F S184I C195Y",6
"lib2","SARS-CoV-2","CAACTTGTTCGAAAGC",5,18.43,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","A14Y S43M L95R",3
"lib2","SARS-CoV-2","CAACTTTATGCGATAA",2,41.87,9.4,-1.43,0.12,2.02,1.07,0.01,">1 nonsynonymous","F8V D34Y S41V",3
"lib2","SARS-CoV-2","CAACTTTCAAAACAAA",9,223.51,10.5,-0.33,0.04,2.93,1.05,0,">1 nonsynonymous","F44D T148A",2
"lib2","SARS-CoV-2","CAACTTTCGAACGCTA",3,51.12,10.22,-0.61,0.06,2.56,1.02,0,">1 nonsynonymous","L5F P149E V153H",3
"lib2","SARS-CoV-2","CAACTTTGAGGGCAAA",6,2.62,NA,NA,NA,NA,NA,NA,"stop","V32A Q176*",2
"lib2","SARS-CoV-2","CAACTTTGCTAGCTTA",1,13.9,10.84,0.01,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAACTTTGTGCAGTTT",2,21.36,10.84,0.01,0.1,2.9,1.13,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","CAACTTTTGCACCGTG",5,104.53,10.23,-0.61,0.03,2.95,1.05,0,">1 nonsynonymous","K87Q S139T",2
"lib2","SARS-CoV-2","CAAGAAAAAAAAACCA",1,20.02,10.59,-0.25,0.08,3,1.03,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","CAAGAAAAAAGTGGGA",6,0.59,NA,NA,NA,NA,NA,NA,"stop","S45* T140Y",2
"lib2","SARS-CoV-2","CAAGAAAAACAATTCG",14,4.98,NA,NA,NA,NA,NA,NA,"stop","F99* S113N",2
"lib2","SARS-CoV-2","CAAGAAAAAGTTCTGA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","L60Y D98P L122A G146* R179P",5
"lib2","SARS-CoV-2","CAAGAAAAGACTTGAA",5,16,6.29,-4.55,0.94,1.5,1.14,0.07,">1 nonsynonymous","D97C W106T C158V G174R",4
"lib2","SARS-CoV-2","CAAGAAAAGATAGATT",2,5.99,10.79,-0.04,0.02,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGAAAAGCTAAGCA",1,7.63,10.74,-0.1,0.08,2.74,1.31,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGAAAAGTCGAGAA",3,14.35,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T3S V103P",2
"lib2","SARS-CoV-2","CAAGAAAATAGGGCTA",12,163.11,10.23,-0.61,0.03,2.92,1.07,0,">1 nonsynonymous","R16K Y119R",2
"lib2","SARS-CoV-2","CAAGAAACAAAAAACG",1,15.12,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","W23E I28L D98Q K128A",4
"lib2","SARS-CoV-2","CAAGAAAGACGTGCTA",4,69.81,9.46,-1.38,0.06,2.82,1.09,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","CAAGAAAGGAAGATTA",11,151.05,10.2,-0.64,0.03,2.63,1.03,0,">1 nonsynonymous","S41K T85M D90A",3
"lib2","SARS-CoV-2","CAAGAAAGGCGTAGCA",3,157.3,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12V P177K P197Q",3
"lib2","SARS-CoV-2","CAAGAAAGTACATTAT",3,28.54,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","F8S A89K L95N R127M G155Y",5
"lib2","SARS-CoV-2","CAAGAAAGTCCATTCT",3,51.93,8.98,-1.86,0.13,1.84,1.1,0.01,">1 nonsynonymous","C61A G86N",2
"lib2","SARS-CoV-2","CAAGAAATACCGGGAA",5,47.24,10.9,0.06,0.04,2.94,1.03,0,">1 nonsynonymous","N24R V37D",2
"lib2","SARS-CoV-2","CAAGAAATCGTATTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37W S45P K114* F160M",4
"lib2","SARS-CoV-2","CAAGAAATCGTGTGGG",8,29.03,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9R S41L Y119C P133L",4
"lib2","SARS-CoV-2","CAAGAAATCTTAGGAA",3,57.69,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6D P96S N120T E135A",4
"lib2","SARS-CoV-2","CAAGAAATGTATACCA",2,5.53,NA,NA,NA,NA,NA,NA,"stop","T46Y C49N D68* P161S",4
"lib2","SARS-CoV-2","CAAGAAATGTTGGGAC",7,72.42,10.86,0.02,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGAACAACACAACA",6,125.12,10.76,-0.08,0.05,2.91,1.08,0,">1 nonsynonymous","K56R K128Y",2
"lib2","SARS-CoV-2","CAAGAACAGTTTAAAA",6,99.57,9.85,-0.98,0.07,2.04,1.03,0,">1 nonsynonymous","E135V E141F",2
"lib2","SARS-CoV-2","CAAGAACATGCAACGT",4,0,NA,NA,NA,NA,NA,NA,"stop","N64* S139Y",2
"lib2","SARS-CoV-2","CAAGAACATTAAATAG",4,11.84,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V77A N107T Y143I",3
"lib2","SARS-CoV-2","CAAGAACGACCGATCT",11,76.57,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Q84H K94S Y143I K199L",4
"lib2","SARS-CoV-2","CAAGAACGATTCAACA",6,28.28,9.18,-1.66,0.15,1.5,1.07,0.01,">1 nonsynonymous","D59L E154R V181M",3
"lib2","SARS-CoV-2","CAAGAACGCATAAAAG",3,4.46,NA,NA,NA,NA,NA,NA,"stop","V11F T55Q L60P I138Y Q163E Q176*",6
"lib2","SARS-CoV-2","CAAGAACTAAGAACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E D59L G83L V103N",4
"lib2","SARS-CoV-2","CAAGAAGATTTAATAA",3,38.33,10.53,-0.3,0.06,2.86,1.17,0,">1 nonsynonymous","N64W T148N",2
"lib2","SARS-CoV-2","CAAGAAGCTGGGCGCT",2,25.59,6.62,-4.21,0.41,1.5,1.14,0.02,">1 nonsynonymous","I2L N13G S113L",3
"lib2","SARS-CoV-2","CAAGAAGTAAGACAAT",7,3.03,NA,NA,NA,NA,NA,NA,"stop","S53K S69N G152I K199*",4
"lib2","SARS-CoV-2","CAAGAAGTTATAACAA",11,65.45,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2G S69G E76D D98V I104L",5
"lib2","SARS-CoV-2","CAAGAATACCGCTGAC",2,17.11,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12W W23S D68G P82T N107L V153Q C158V",7
"lib2","SARS-CoV-2","CAAGAATACTAATAAA",7,107.18,10.89,0.05,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGAATACTATTTAA",3,6.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19T T63P Y91V",3
"lib2","SARS-CoV-2","CAAGAATATAAGGTAA",2,22.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S45N Y119T F126W P177G",4
"lib2","SARS-CoV-2","CAAGAATATCCAAAGT",13,60.26,9.22,-1.62,0.12,1.82,1.06,0.01,">1 nonsynonymous","A33V A42V P96V E154P",4
"lib2","SARS-CoV-2","CAAGAATCTTAGATCG",2,102.12,10.89,0.06,0.07,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGAATGAAACTGAA",1,18.7,10.89,0.05,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGAATGAAAGATAT",7,34.99,9,-1.84,0.17,1.52,1.14,0.01,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","CAAGAATGAATACCAG",1,53.36,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S29K F47G F62D N92D A105H I142N N171C",7
"lib2","SARS-CoV-2","CAAGAATGACTAGTTT",7,57.13,8.88,-1.96,0.14,1.5,1.1,0.01,">1 nonsynonymous","R25Q D90S G146S",3
"lib2","SARS-CoV-2","CAAGAATGATCCTAAA",16,6.04,NA,NA,NA,NA,NA,NA,"stop","G9Q R127*",2
"lib2","SARS-CoV-2","CAAGACAAAATGTCAT",3,96.55,10.19,-0.65,0.04,2.87,1.01,0,">1 nonsynonymous","K87F R136L",2
"lib2","SARS-CoV-2","CAAGACAAAATTACCG",1,42.41,10.61,-0.22,0.07,3,1.01,0,">1 nonsynonymous","A14Q T85A",2
"lib2","SARS-CoV-2","CAAGACAAAGTATAGC",20,299.27,10.04,-0.8,0.04,2.86,1.14,0,"1 nonsynonymous","Y175H",1
"lib2","SARS-CoV-2","CAAGACACCGCAGTCA",5,21.62,7.18,-3.65,0.18,1.5,1.05,0.01,">1 nonsynonymous","C6R D112L",2
"lib2","SARS-CoV-2","CAAGACAGGATTTCTT",11,247.75,10.72,-0.11,0.04,2.91,1.09,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","CAAGACATGTAAAATG",4,36.03,10.96,0.13,0.09,2.98,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGACATTATAACTT",3,141.57,8.81,-2.03,0.05,2.99,1.02,0,">1 nonsynonymous","R16D K114T F126S",3
"lib2","SARS-CoV-2","CAAGACCAACATACGA",3,56.02,9.77,-1.06,0.04,2.92,1.09,0,">1 nonsynonymous","K87D T201V",2
"lib2","SARS-CoV-2","CAAGACCACATCCCTG",1,33.32,8.23,-2.61,0.19,2.17,1.05,0.02,"1 nonsynonymous","N171K",1
"lib2","SARS-CoV-2","CAAGACCACCTAAATT",5,123.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K56G G86S Y91D L122T C150Y Q176G",6
"lib2","SARS-CoV-2","CAAGACCAGAACCCCG",2,71.17,10.97,0.13,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGACCCTCTGGGTC",2,14.61,9.88,-0.96,0.17,2.11,1.04,0.01,">1 nonsynonymous","S19P F134T",2
"lib2","SARS-CoV-2","CAAGACCTATGAGAAT",1,1.83,NA,NA,NA,NA,NA,NA,"stop","I72* F99S A105V E154G",4
"lib2","SARS-CoV-2","CAAGACCTGATACCAA",2,2.54,NA,NA,NA,NA,NA,NA,"stop","F17R Q84Y I138N Y175D K199*",5
"lib2","SARS-CoV-2","CAAGACGAATATGCTG",6,59.93,9.94,-0.9,0.06,2.59,1.01,0,">1 nonsynonymous","A42M C49V K56G",3
"lib2","SARS-CoV-2","CAAGACGATTCAACCA",9,46.69,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","N1S G83E N107Q P149L Y165K P169M",6
"lib2","SARS-CoV-2","CAAGACGCCCGTTACA",3,28.08,10.41,-0.42,0.05,2.89,1.09,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","CAAGACGCCCTTTCCA",1,8.37,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D68S F99T",2
"lib2","SARS-CoV-2","CAAGACGCTTAAATAA",8,116.32,9.64,-1.19,0.06,2.05,1.04,0,">1 nonsynonymous","C61A A89G K198T",3
"lib2","SARS-CoV-2","CAAGACGTTAGCTATT",3,21.45,10.91,0.08,0.07,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGACTATCGCGCCG",19,126.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y T63P R124H G146R",4
"lib2","SARS-CoV-2","CAAGACTATTGAGCTT",1,15.1,9.38,-1.46,0.09,1.96,1,0,">1 nonsynonymous","A67L P82L",2
"lib2","SARS-CoV-2","CAAGACTTATTCAGTA",5,83.9,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C6Y G51L L95V N151K",4
"lib2","SARS-CoV-2","CAAGAGAAATACTGAA",4,176.72,10.89,0.05,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGAGAACAATAAGG",4,71.33,10.56,-0.28,0.07,2.96,1.01,0,">1 nonsynonymous","G116D N130D",2
"lib2","SARS-CoV-2","CAAGAGAATATATTTA",3,41.31,10.17,-0.67,0.09,2.7,1.11,0,">1 nonsynonymous","W106M N130V S147I",3
"lib2","SARS-CoV-2","CAAGAGAATTGCGTTA",5,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146P V181M",2
"lib2","SARS-CoV-2","CAAGAGACCTGCTATG",2,26.1,7.54,-3.3,0.32,1.5,1.08,0.03,">1 nonsynonymous","Y91N D98N W106R K128I",4
"lib2","SARS-CoV-2","CAAGAGACCTTCAACT",4,29.39,7.37,-3.47,0.45,1.5,1.03,0.06,">1 nonsynonymous","V11D T55C N64E N118H",4
"lib2","SARS-CoV-2","CAAGAGACTTACATAG",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W N107T F134E",3
"lib2","SARS-CoV-2","CAAGAGAGCCACGCTA",2,49.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15Y S29E N40T K56S V103I Y119K R127L",7
"lib2","SARS-CoV-2","CAAGAGATGAATCGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35V T63E G74M Y93* G146T G155R S200L",7
"lib2","SARS-CoV-2","CAAGAGATTATCAATA",6,72.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26I S45A D97P S108H Y119N F126P",6
"lib2","SARS-CoV-2","CAAGAGATTGGTACGC",3,11.82,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","Y93T",1
"lib2","SARS-CoV-2","CAAGAGCAACCAACAC",3,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y F99I G146I Q168S",4
"lib2","SARS-CoV-2","CAAGAGCACTAGGACC",3,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21M C61R C102H P177R",4
"lib2","SARS-CoV-2","CAAGAGCACTGAAATA",13,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D L183W",2
"lib2","SARS-CoV-2","CAAGAGCAGTCACCCA",16,5.9,7.09,-3.74,1.19,3,1.2,0.01,">1 nonsynonymous","N1R D34S G86Y W106G Y119R L183T",6
"lib2","SARS-CoV-2","CAAGAGCCTCGACCCG",5,61.44,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S29M V65W D90N T100P K114I L122H V180E T201S",8
"lib2","SARS-CoV-2","CAAGAGCTATAAAGTC",3,57.57,6.67,-4.16,0.41,1.5,1.33,0.03,">1 nonsynonymous","P96F S129R",2
"lib2","SARS-CoV-2","CAAGAGCTGGGGTACC",1,10.09,8.86,-1.97,0.23,2.51,1,0.02,">1 nonsynonymous","I2R A105V L125V L183I",4
"lib2","SARS-CoV-2","CAAGAGGCCGAATCCA",1,43.35,10.73,-0.1,0.05,2.99,1,0,"1 nonsynonymous","K48S",1
"lib2","SARS-CoV-2","CAAGAGGCTAAGCAAC",16,119.34,9.09,-1.75,0.07,1.8,1.11,0,"1 nonsynonymous","L162K",1
"lib2","SARS-CoV-2","CAAGAGGCTAATCTAC",8,57.33,8.66,-2.18,0.08,2.05,1.08,0,">1 nonsynonymous","S43E P161M",2
"lib2","SARS-CoV-2","CAAGAGTAAACCTCCT",3,28.96,8.23,-2.61,0.25,1.5,1.23,0.02,">1 nonsynonymous","A42I G86C",2
"lib2","SARS-CoV-2","CAAGAGTAAATTTATA",2,107.77,8.13,-2.7,0.1,2.33,1.08,0,">1 nonsynonymous","Y119S L125R K128S K132F",4
"lib2","SARS-CoV-2","CAAGAGTAGTCCTCAT",2,0.33,NA,NA,NA,NA,NA,NA,"stop","A42D G74R N92* A145D E154* Q163L",6
"lib2","SARS-CoV-2","CAAGAGTCGAAAACCC",4,64.86,9.88,-0.95,0.12,2.05,1.03,0.01,">1 nonsynonymous","I2D S36K R136F",3
"lib2","SARS-CoV-2","CAAGAGTGAATTCGAC",14,156.39,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3I R27C T85A Y119S C150H S164A P177R T201S",8
"lib2","SARS-CoV-2","CAAGATAAAAAAGAAT",5,37.99,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10T D68L Y159I Q168Y",4
"lib2","SARS-CoV-2","CAAGATACTGGTTGTA",2,34.21,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F8R D90I A105L Y123L P149W F160N P169T",7
"lib2","SARS-CoV-2","CAAGATAGAAAATCGA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","V71* V77H G101E",3
"lib2","SARS-CoV-2","CAAGATAGTAACCCGT",2,37.17,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S45R Y165C",2
"lib2","SARS-CoV-2","CAAGATAGTCCGGGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","T63W V103* P177C",3
"lib2","SARS-CoV-2","CAAGATAGTGTAAAAA",18,90.24,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V65E P96V Y143A",3
"lib2","SARS-CoV-2","CAAGATATAAAACTAT",1,47.79,10.78,-0.06,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGATATACCCAATA",16,129.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Q84W A105F A145P",3
"lib2","SARS-CoV-2","CAAGATATCGCAGATA",7,144.27,10.15,-0.68,0.03,2.82,1.07,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","CAAGATATTCTCCTGT",11,129.8,10.81,-0.02,0.04,2.83,1.17,0,"1 nonsynonymous","K56G",1
"lib2","SARS-CoV-2","CAAGATCCCCAAATGC",4,24.55,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N107L V180R S200W",3
"lib2","SARS-CoV-2","CAAGATCGAGTTGAAT",7,193.37,7.15,-3.68,0.12,2,1.14,0,">1 nonsynonymous","S41E P54R C150Q L188D",4
"lib2","SARS-CoV-2","CAAGATCTACATTTAA",5,41.51,10.7,-0.14,0.03,2.95,1.05,0,">1 nonsynonymous","S43R A81M",2
"lib2","SARS-CoV-2","CAAGATGACACACAAT",2,28.51,10.23,-0.61,0.04,2.93,1.07,0,">1 nonsynonymous","K56L D98V",2
"lib2","SARS-CoV-2","CAAGATGAGAGCCGAG",4,51.39,10.35,-0.49,0.07,2.77,1.08,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","CAAGATGGACACCAGG",4,67.31,10.01,-0.83,0.04,2.95,1.06,0,">1 nonsynonymous","Y35L N118H",2
"lib2","SARS-CoV-2","CAAGATGGCCGTCTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T63N A81T Y123S S129K F160*",5
"lib2","SARS-CoV-2","CAAGATGGGCTTGATA",7,33.96,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","Y121C S147I C158S L187W",4
"lib2","SARS-CoV-2","CAAGATGTATGCCAAT",1,41.1,10.68,-0.16,0.06,2.87,1.11,0,"1 nonsynonymous","Y39K",1
"lib2","SARS-CoV-2","CAAGATGTCATGACGC",11,156.95,10.64,-0.2,0.02,2.91,1.08,0,">1 nonsynonymous","S53D G83E N130F",3
"lib2","SARS-CoV-2","CAAGATGTTGACAAAC",2,13.84,6.23,-4.6,0.78,1.5,1.16,0.01,">1 nonsynonymous","I2S F62N K94T V173S L183T",5
"lib2","SARS-CoV-2","CAAGATGTTTGCCGCT",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R D112L",2
"lib2","SARS-CoV-2","CAAGATTAAATCGAAT",7,122.23,10.7,-0.13,0.06,2.89,1.07,0,">1 nonsynonymous","D59T K94R",2
"lib2","SARS-CoV-2","CAAGATTAACTAAAAA",2,72.12,10.84,0,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGATTAAGTTTAAG",2,14.9,9.15,-1.68,0.2,1.58,1.04,0.02,">1 nonsynonymous","A14K D59T L95T",3
"lib2","SARS-CoV-2","CAAGATTATTTATCCG",8,51.22,10.52,-0.32,0.06,2.8,1.17,0,">1 nonsynonymous","C61L T148I",2
"lib2","SARS-CoV-2","CAAGATTATTTTTTAT",3,43.44,10.61,-0.22,0.08,2.88,1.09,0,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","CAAGATTCCCAAGTTA",11,325.81,10.08,-0.76,0.03,2.9,1.02,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","CAAGATTGCATTCAAA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44K G86T F126T L183G",4
"lib2","SARS-CoV-2","CAAGATTGTATAATTT",4,22.22,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A89Y D90Y P161Y",3
"lib2","SARS-CoV-2","CAAGATTTTCAAATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V G196L",2
"lib2","SARS-CoV-2","CAAGATTTTCGAGCAA",2,6.43,6,-4.84,2,1.5,1.08,0.05,">1 nonsynonymous","F8N D34E L38R W106L T170S",5
"lib2","SARS-CoV-2","CAAGCAAAACTTCTAA",7,105.69,7.15,-3.68,0.24,1.53,1.16,0.01,">1 nonsynonymous","G9P V37T Y143D",3
"lib2","SARS-CoV-2","CAAGCAAAATATAAGG",12,44.87,10.75,-0.08,0.02,2.98,1.05,0,"1 nonsynonymous","N24G",1
"lib2","SARS-CoV-2","CAAGCAAAATTAATAC",7,40.37,7.16,-3.68,0.29,1.5,1.06,0.03,">1 nonsynonymous","C49K A105L",2
"lib2","SARS-CoV-2","CAAGCAAACAATAACT",3,13.2,10.94,0.1,0.1,2.92,1.13,0.01,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","CAAGCAAACGCATTAC",1,31.09,10.93,0.1,0.07,2.87,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGCAAACGCTCGAA",8,79.52,10.27,-0.57,0.06,2.79,1.06,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","CAAGCAAAGATATTAC",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S W23V K87F P149T",4
"lib2","SARS-CoV-2","CAAGCAAAGCAAACGA",3,83.54,10.28,-0.55,0.04,2.85,1.1,0,">1 nonsynonymous","Y39P C61Y A190V",3
"lib2","SARS-CoV-2","CAAGCAAAGCGATAAC",2,3.15,NA,NA,NA,NA,NA,NA,"stop","N64R I80* F126L C158F",4
"lib2","SARS-CoV-2","CAAGCAAATAAGTCAT",5,60.83,9.09,-1.74,0.07,2.87,1.12,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","CAAGCAACATAAAACT",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y A22N T100A D112E Y143S",5
"lib2","SARS-CoV-2","CAAGCAACCCAACCAG",12,263.61,10.21,-0.62,0.03,2.89,1.08,0,">1 nonsynonymous","N13S A42G K87P",3
"lib2","SARS-CoV-2","CAAGCAAGTATTTCCG",2,32.72,8.56,-2.28,0.14,2.93,1.08,0.01,"1 nonsynonymous","S113M",1
"lib2","SARS-CoV-2","CAAGCAATAAGCATAT",6,86.66,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","G9F G172L L188S",3
"lib2","SARS-CoV-2","CAAGCAATCACCCCCG",3,0.57,NA,NA,NA,NA,NA,NA,"stop","A14M N109* N151K",3
"lib2","SARS-CoV-2","CAAGCACACCACCTGT",10,119.93,10.71,-0.12,0.03,2.95,1.05,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","CAAGCACACCCTGAGA",9,35.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K56E L60S V103H T201S",4
"lib2","SARS-CoV-2","CAAGCACCATCCCTTA",5,39.56,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y35S Y93L N107I K114Q",4
"lib2","SARS-CoV-2","CAAGCACGAAGCACGT",2,11.89,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","T46S V103N",2
"lib2","SARS-CoV-2","CAAGCACGACGACTGA",14,116.81,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","L5V S19L C31G P96T L122I",5
"lib2","SARS-CoV-2","CAAGCACGTACAAACA",14,314.24,7.77,-3.07,0.17,1.5,1.1,0.01,">1 nonsynonymous","Q79Y R127S D137T",3
"lib2","SARS-CoV-2","CAAGCACTAAAATTCA",8,118.72,10.61,-0.23,0.03,2.95,1.03,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CAAGCACTCATCATTT",2,29.49,10.79,-0.05,0.02,3,1.02,0,">1 nonsynonymous","N24T N151L",2
"lib2","SARS-CoV-2","CAAGCAGACCTTAAAC",10,202.64,9.83,-1,0.03,2.93,1.03,0,">1 nonsynonymous","C6W K87T",2
"lib2","SARS-CoV-2","CAAGCAGCAGGCCAAT",5,65.58,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A33K N58F G74F Y178T",4
"lib2","SARS-CoV-2","CAAGCAGCGCAACAAA",3,27.81,10.25,-0.58,0.11,2.65,1.05,0.01,">1 nonsynonymous","G9W T15V S29C",3
"lib2","SARS-CoV-2","CAAGCAGGCGACCAAC",6,100.21,10.93,0.1,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGCAGGTGCGCTGT",11,0.6,NA,NA,NA,NA,NA,NA,"stop","K26* G86L G116A",3
"lib2","SARS-CoV-2","CAAGCAGTTCATTTAT",6,39.84,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N107T T140S A145F",3
"lib2","SARS-CoV-2","CAAGCATAAGCGTGCC",8,61.18,10.2,-0.64,0.08,2.72,1.01,0,"1 nonsynonymous","A105M",1
"lib2","SARS-CoV-2","CAAGCATACGACAACC",4,0.27,NA,NA,NA,NA,NA,NA,"stop","W23* C61M S108M I142M G166R P197L",6
"lib2","SARS-CoV-2","CAAGCATATGATGCGT",4,87.7,9.86,-0.98,0.04,1.96,1.08,0,">1 nonsynonymous","F70M D97Y",2
"lib2","SARS-CoV-2","CAAGCATCCTTCGTCC",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4R",1
"lib2","SARS-CoV-2","CAAGCATGAAGTGAGA",8,137.62,8.28,-2.56,0.1,1.56,1.08,0,">1 nonsynonymous","K87G F99V T201S",3
"lib2","SARS-CoV-2","CAAGCATGATCAAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140C G172S",2
"lib2","SARS-CoV-2","CAAGCATGTAATTAAT",13,61.23,6.82,-4.02,0.44,1.5,1.3,0.03,">1 nonsynonymous","R27A C49Y E141R",3
"lib2","SARS-CoV-2","CAAGCATTAGGGTACA",11,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y S43N V52W",3
"lib2","SARS-CoV-2","CAAGCCAAAGCTTTCA",3,1.31,NA,NA,NA,NA,NA,NA,"stop","Y50S F70R V77A P96Q P133A Q168L Q176*",7
"lib2","SARS-CoV-2","CAAGCCAAAGGGTAAA",6,59.96,6.78,-4.05,0.27,1.5,1.06,0.01,">1 nonsynonymous","F12G Y178C",2
"lib2","SARS-CoV-2","CAAGCCAAATTAATAC",5,129.2,9.69,-1.15,0.04,2.87,1.07,0,">1 nonsynonymous","A14E T170A",2
"lib2","SARS-CoV-2","CAAGCCAAGAACAAGA",3,51.2,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4A S36E Y91P D98R",4
"lib2","SARS-CoV-2","CAAGCCACAATTTCCA",5,100.97,10.82,-0.02,0.06,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGCCACACTTTTCA",3,28.49,8.85,-1.98,0.05,2.96,1.1,0,">1 nonsynonymous","L122Q N157M",2
"lib2","SARS-CoV-2","CAAGCCACGCGATTAT",22,277.07,8.18,-2.66,0.14,2.23,1.06,0.01,">1 nonsynonymous","G9R A14L S43N K114P",4
"lib2","SARS-CoV-2","CAAGCCAGAAAGTAGG",16,343.17,10.77,-0.07,0.03,2.98,1.04,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","CAAGCCATAAACTCCA",4,48.66,10.26,-0.58,0.07,2.81,1.06,0,"1 nonsynonymous","G51A",1
"lib2","SARS-CoV-2","CAAGCCATCAAGGATG",5,56.53,10.47,-0.36,0.05,2.92,1.05,0,">1 nonsynonymous","R16M G83Y S129V",3
"lib2","SARS-CoV-2","CAAGCCCAAGGATCCA",5,52.18,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F8Y K87S L95H N130M T170E",5
"lib2","SARS-CoV-2","CAAGCCCAAGTCACTA",7,27.12,7.73,-3.1,0.43,1.5,1.22,0.05,">1 nonsynonymous","T15H A42V S43C T140P P169R",5
"lib2","SARS-CoV-2","CAAGCCCGTAGGCCTA",4,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N A22Q A81S",3
"lib2","SARS-CoV-2","CAAGCCGAAGCTGGAC",2,40.02,10.48,-0.36,0.08,2.92,1.07,0,">1 nonsynonymous","K56T G152L",2
"lib2","SARS-CoV-2","CAAGCCTATATGAGTA",2,17.8,10.63,-0.21,0.28,2.23,1.01,0.07,">1 nonsynonymous","E141L A190T",2
"lib2","SARS-CoV-2","CAAGCCTCTAACATTC",8,59.26,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","D59C Q84H Y93F L122G E141I",5
"lib2","SARS-CoV-2","CAAGCCTCTAGGGATA",1,62.16,10.66,-0.18,0.04,2.91,1.03,0,">1 nonsynonymous","T100F P133S",2
"lib2","SARS-CoV-2","CAAGCCTGTAGTCCGA",7,48.76,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F12Q C49R",2
"lib2","SARS-CoV-2","CAAGCCTTAGAATTAG",5,52.23,10.57,-0.27,0.08,2.84,1.11,0,">1 nonsynonymous","N64I D97L",2
"lib2","SARS-CoV-2","CAAGCCTTGAAGGTTT",6,241.64,10.12,-0.72,0.02,2.97,1.04,0,"1 nonsynonymous","Y159H",1
"lib2","SARS-CoV-2","CAAGCCTTGCACCCTA",14,156.08,10.84,0,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGCGAAAAGAAAAG",15,3.74,NA,NA,NA,NA,NA,NA,"stop","F99* Y143K Y175*",3
"lib2","SARS-CoV-2","CAAGCGAAACTGACTA",4,37.89,10.8,-0.03,0.03,2.99,1.02,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","CAAGCGAAAGTAAAAT",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34A C49P",2
"lib2","SARS-CoV-2","CAAGCGAACCACGCAA",2,40.98,10.95,0.11,0.07,2.86,1.04,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","CAAGCGAAGTAACATA",3,16.1,7.69,-3.15,0.15,1.91,1.1,0.01,">1 nonsynonymous","C31D S43I N107Q L187I T201L",5
"lib2","SARS-CoV-2","CAAGCGAATGTACGGT",2,44.61,10.02,-0.81,0.09,2.72,1.07,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","CAAGCGACAACAAATT",6,88.03,9.99,-0.84,0.09,2.16,1.01,0,">1 nonsynonymous","A42Q S69K",2
"lib2","SARS-CoV-2","CAAGCGACCTCCGACA",6,99.19,10.83,-0.01,0.05,2.93,1.07,0,">1 nonsynonymous","T46V P197V",2
"lib2","SARS-CoV-2","CAAGCGACTCAAACAA",3,49.24,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2L L38S S43C V65T",4
"lib2","SARS-CoV-2","CAAGCGAGATACGCCA",3,49.28,10.59,-0.25,0.1,2.9,1.06,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","CAAGCGAGTTTATCTT",4,88.88,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","P7D S41P K94W N110K F160S Y178D",6
"lib2","SARS-CoV-2","CAAGCGATAGTAGATT",17,6.93,NA,NA,NA,NA,NA,NA,"stop","P133* P177*",2
"lib2","SARS-CoV-2","CAAGCGATCTCCTGTC",1,25.63,7.38,-3.45,0.31,1.5,1.02,0.03,">1 nonsynonymous","C61Y Y165S",2
"lib2","SARS-CoV-2","CAAGCGATTCAAACGA",9,200.35,9.14,-1.7,0.03,2.83,1.08,0,">1 nonsynonymous","N4G N40K K132I N171L",4
"lib2","SARS-CoV-2","CAAGCGATTGAAAATC",9,0.51,NA,NA,NA,NA,NA,NA,"stop","A42F T100* W106Y",3
"lib2","SARS-CoV-2","CAAGCGCAAGTAGCTA",12,1.08,NA,NA,NA,NA,NA,NA,"stop","F99V C150Y G174*",3
"lib2","SARS-CoV-2","CAAGCGTAAAAAGTGC",5,50.1,10.8,-0.03,0.07,2.96,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGCGTATGACACAT",13,77.85,10.69,-0.15,0.03,3,1,0,">1 nonsynonymous","G9W C61V",2
"lib2","SARS-CoV-2","CAAGCGTCCTAACTAA",2,25.84,6.32,-4.52,0.71,1.5,1.13,0.02,">1 nonsynonymous","F47G A67T",2
"lib2","SARS-CoV-2","CAAGCTAAACTAATGA",3,38.88,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","R25N I72R G172E",3
"lib2","SARS-CoV-2","CAAGCTAACATCGAGA",5,52.72,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A105S Q144P Y165D G172I",4
"lib2","SARS-CoV-2","CAAGCTAATTTATCAT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A L95T P177R",3
"lib2","SARS-CoV-2","CAAGCTAGATTTTTTA",9,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N F44W L57N A89D Y119D",5
"lib2","SARS-CoV-2","CAAGCTAGCAGAATAA",2,48.04,9.63,-1.21,0.12,2.04,1.08,0,">1 nonsynonymous","G9S F17M D34R C61N",4
"lib2","SARS-CoV-2","CAAGCTATTCCCCTCC",10,134.79,9.27,-1.56,0.07,2.89,1.15,0,">1 nonsynonymous","Y119M I138L",2
"lib2","SARS-CoV-2","CAAGCTCAACTCCCTA",3,23.24,10.49,-0.35,0.06,2.79,1.22,0,">1 nonsynonymous","S41R N130S",2
"lib2","SARS-CoV-2","CAAGCTCATATAAACG",11,39.45,6.34,-4.5,0.22,3,1.07,0.01,">1 nonsynonymous","I138C C158F R179G",3
"lib2","SARS-CoV-2","CAAGCTCCACACAAAT",5,140.88,10.01,-0.83,0.04,2.94,1.08,0,">1 nonsynonymous","A33W C61E K94A E154I",4
"lib2","SARS-CoV-2","CAAGCTCCCCATCCCA",3,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y C61S N92M Y119L K128D G146A F160H",7
"lib2","SARS-CoV-2","CAAGCTCCGAAGAGAC",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y P96W",2
"lib2","SARS-CoV-2","CAAGCTCCGACAAACT",6,85.24,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C61Y G152S P177L",3
"lib2","SARS-CoV-2","CAAGCTCTAAATCCAT",2,34.01,10.78,-0.05,0.06,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGCTCTCTTTATGT",2,0.6,NA,NA,NA,NA,NA,NA,"stop","F70V R78* P82L Y143T Y175W L188I",6
"lib2","SARS-CoV-2","CAAGCTGAAAAATTTA",22,134.4,8.12,-2.72,0.06,1.62,1.11,0,">1 nonsynonymous","R78M D90V N118Q",3
"lib2","SARS-CoV-2","CAAGCTGAGAATGAAA",4,13.74,7.33,-3.5,0.51,1.5,1.06,0.07,">1 nonsynonymous","P7M G51C D68M T100N",4
"lib2","SARS-CoV-2","CAAGCTGCATATTCCA",3,24.84,9.47,-1.36,0.16,2.09,1.06,0.01,">1 nonsynonymous","K56S L162Q",2
"lib2","SARS-CoV-2","CAAGCTGCCCGGGCTG",2,38.28,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G101C A105T",2
"lib2","SARS-CoV-2","CAAGCTGCTATTGTAT",6,65.74,10.5,-0.33,0.04,2.93,1.06,0,">1 nonsynonymous","D98A Q144S",2
"lib2","SARS-CoV-2","CAAGCTGGCCCACGGC",4,173.72,10.2,-0.63,0.03,2.99,1.01,0,">1 nonsynonymous","I2F P169Q T201Y",3
"lib2","SARS-CoV-2","CAAGCTTCAAACGCGT",1,10.7,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","R179T",1
"lib2","SARS-CoV-2","CAAGCTTGACGCAATT",1,20.94,9.96,-0.87,0.15,2.24,1,0.01,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","CAAGCTTTTCTCCCTA",11,167.84,8.57,-2.27,0.09,2.73,1.09,0,">1 nonsynonymous","Y35S N120T",2
"lib2","SARS-CoV-2","CAAGGAAAACCCAGGG",6,63.44,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N58V A105K",2
"lib2","SARS-CoV-2","CAAGGAAAACTATTGA",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36G K48R K94H W106N",4
"lib2","SARS-CoV-2","CAAGGAAAAGACCATG",2,74.93,10.91,0.08,0.04,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGGAAATGTCCGTG",11,135.83,10.72,-0.11,0.04,2.96,1.04,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CAAGGAAATTATCCGG",2,32.6,7.33,-3.51,0.4,1.5,1.09,0.05,"1 nonsynonymous","G101Y",1
"lib2","SARS-CoV-2","CAAGGAACACATCAAT",2,19.25,10.8,-0.03,0.04,2.93,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","CAAGGAACACCCAGCA",8,1.07,NA,NA,NA,NA,NA,NA,"stop","I28M W106* F134H L188S",4
"lib2","SARS-CoV-2","CAAGGAAGACATGTAA",1,21.05,9.11,-1.72,0.11,2.88,1.07,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","CAAGGAAGTGGCTTAG",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E L60M I88A N120K L162Y T170N T201W",7
"lib2","SARS-CoV-2","CAAGGAATAGAGGTCA",8,8.33,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","K56F D98I D112A Y121D L131Y E186I",6
"lib2","SARS-CoV-2","CAAGGAATCGTTGTAT",7,121.21,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L60M G86V F126L Q163D",4
"lib2","SARS-CoV-2","CAAGGAATGTTGGTAC",3,39.83,10.75,-0.09,0.05,2.88,1.13,0,">1 nonsynonymous","R27I E141S T201A",3
"lib2","SARS-CoV-2","CAAGGAATTCCAACAT",4,81.68,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36A D112Q K128G Q144R",4
"lib2","SARS-CoV-2","CAAGGACAAAACACCG",9,55.73,10.94,0.1,0.07,2.96,1.05,0,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","CAAGGACAAAATAGGC",4,84.19,10.33,-0.5,0.04,2.92,1.06,0,">1 nonsynonymous","S36D L125G N130E",3
"lib2","SARS-CoV-2","CAAGGACAAATTACAG",5,1.08,NA,NA,NA,NA,NA,NA,"stop","W23K C49I W106V S108* L131V G146S V194I",7
"lib2","SARS-CoV-2","CAAGGACAACCAAGAT",1,72.88,10.18,-0.65,0.12,2.26,1.07,0,">1 nonsynonymous","N109R S139K G146A",3
"lib2","SARS-CoV-2","CAAGGACAATCTGACC",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40V T85S",2
"lib2","SARS-CoV-2","CAAGGACACTAACTCC",3,84.19,10.73,-0.11,0.06,2.98,1.05,0,"1 nonsynonymous","R78T",1
"lib2","SARS-CoV-2","CAAGGACATAAATGAA",7,80.97,10.77,-0.06,0.05,3,1.03,0,">1 nonsynonymous","L5E A89S",2
"lib2","SARS-CoV-2","CAAGGACATAGGCATT",5,1.06,NA,NA,NA,NA,NA,NA,"stop","V11L F44L F99*",3
"lib2","SARS-CoV-2","CAAGGACCAACTCATG",7,10.02,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L60R L95I R136F Y143K",4
"lib2","SARS-CoV-2","CAAGGACCCACCCGAT",6,57.26,9.72,-1.12,0.08,1.92,1.07,0,">1 nonsynonymous","L60I C102M E141G K199Y",4
"lib2","SARS-CoV-2","CAAGGACCGCATTAAT",2,36.54,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5S S45V S53V Y119E D137K",5
"lib2","SARS-CoV-2","CAAGGACTGAAAAATG",7,61.06,9.63,-1.2,0.08,1.9,1.1,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","CAAGGACTGTAATATC",5,47.66,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A67R P133L G155V",3
"lib2","SARS-CoV-2","CAAGGAGAAGACCTCA",8,0.07,NA,NA,NA,NA,NA,NA,"stop","E10H R25E L57* G83T S129K I142Y",6
"lib2","SARS-CoV-2","CAAGGAGACAGTAACG",11,55.14,6,-4.84,2,1.97,1.13,0,">1 nonsynonymous","T100S R127K Y143R V173L",4
"lib2","SARS-CoV-2","CAAGGAGACTCAACAC",4,41.93,9.62,-1.21,0.12,1.73,1.09,0.01,">1 nonsynonymous","L5S T85M W106K H189P",4
"lib2","SARS-CoV-2","CAAGGAGACTGCTGTC",11,116.61,11.01,0.17,0.06,2.85,1.15,0,">1 nonsynonymous","N40R L122K E154Q",3
"lib2","SARS-CoV-2","CAAGGAGAGTCAAAAA",7,79.73,8.9,-1.93,0.08,1.57,1.1,0,">1 nonsynonymous","V52Y D59G I88L",3
"lib2","SARS-CoV-2","CAAGGAGCAAGATGCG",1,19.93,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","CAAGGAGGATCGCCAG",3,86.93,9.65,-1.18,0.09,1.96,1.08,0,">1 nonsynonymous","V37S T100D G152R A190E G196A",5
"lib2","SARS-CoV-2","CAAGGAGGTCTTTGTC",1,0.48,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","CAAGGAGTCATCTAGG",10,224.47,10.39,-0.45,0.04,2.91,1.07,0,">1 nonsynonymous","A22C C195W",2
"lib2","SARS-CoV-2","CAAGGATAATCCATAC",12,394.03,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","A14L D59S S69P I88M I104L F167G Q176L T201S",8
"lib2","SARS-CoV-2","CAAGGATAGGATATTA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","I2S K56Q Y123* I138L L187F",5
"lib2","SARS-CoV-2","CAAGGATATAATGCAA",1,19.11,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D98G Y119S F167E",3
"lib2","SARS-CoV-2","CAAGGATGATGAGCCA",9,120.13,9.6,-1.24,0.03,2.88,1.11,0,">1 nonsynonymous","L5I Y119Q",2
"lib2","SARS-CoV-2","CAAGGATTAATAATGT",8,72.81,9.94,-0.89,0.14,2.27,1.06,0.01,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","CAAGGATTTGCCGCCA",3,60.47,9.99,-0.85,0.06,2.59,1.02,0,">1 nonsynonymous","G9L A89T",2
"lib2","SARS-CoV-2","CAAGGCAAACAATACT",2,8.94,10.73,-0.1,0.05,3,1.03,0,">1 nonsynonymous","L60A V77L",2
"lib2","SARS-CoV-2","CAAGGCAAGACCCCCG",2,14.04,10.82,-0.02,0.16,2.83,1.14,0.01,"1 nonsynonymous","K56G",1
"lib2","SARS-CoV-2","CAAGGCAAGGTTAAAA",13,205.62,9.89,-0.95,0.06,2.34,1.03,0,"1 nonsynonymous","D137C",1
"lib2","SARS-CoV-2","CAAGGCAAGTGCTTAT",8,91.7,8.88,-1.96,0.06,2.83,1.15,0,">1 nonsynonymous","L60E Y119W E141S",3
"lib2","SARS-CoV-2","CAAGGCACGGCATTGA",4,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F G83L S108P K132A",4
"lib2","SARS-CoV-2","CAAGGCACTATTTGCG",3,42.18,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19V G86A",2
"lib2","SARS-CoV-2","CAAGGCCACACATCAC",5,33.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T15V S29I K87S K94L",4
"lib2","SARS-CoV-2","CAAGGCCACTGCCAAT",8,33.66,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","CAAGGCCAGTCTTTTT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","K48F D90*",2
"lib2","SARS-CoV-2","CAAGGCCCATTCTTGC",2,67.05,10.76,-0.08,0.06,2.89,1.13,0,">1 nonsynonymous","Y66T D98N",2
"lib2","SARS-CoV-2","CAAGGCCTTGAGATCC",9,56.84,7.62,-3.21,0.17,1.5,1.09,0.01,">1 nonsynonymous","I2T S41T D137G",3
"lib2","SARS-CoV-2","CAAGGCGACTATCCAG",3,12.03,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6I S19E D34Y G51H P197C",5
"lib2","SARS-CoV-2","CAAGGCGGATTATGTT",8,81.94,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6N K48G F99I I142S L183I",5
"lib2","SARS-CoV-2","CAAGGCGGGTATATTT",1,2.34,NA,NA,NA,NA,NA,NA,"stop","A33* T63A K114M N120M G146C",5
"lib2","SARS-CoV-2","CAAGGCGTAGTTTGAC",2,0.66,NA,NA,NA,NA,NA,NA,"stop","R27* I72G Y123R",3
"lib2","SARS-CoV-2","CAAGGCTGCTCACCGG",3,20.01,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9K F99L P149T Y165V",4
"lib2","SARS-CoV-2","CAAGGCTTGAATAGGG",13,108.11,8.21,-2.63,0.09,1.81,1.06,0,">1 nonsynonymous","T46S C61F N118V A145V",4
"lib2","SARS-CoV-2","CAAGGCTTTCGAAGTT",1,44.86,7.9,-2.94,0.18,1.8,1.07,0.01,">1 nonsynonymous","I2L S113R N120L",3
"lib2","SARS-CoV-2","CAAGGGAAAAGCCTTT",5,1.48,NA,NA,NA,NA,NA,NA,"stop","D98F C195*",2
"lib2","SARS-CoV-2","CAAGGGAAACAAATCT",2,70.03,9.87,-0.96,0.04,2.98,1.03,0,">1 nonsynonymous","A67I K87V D98E N120L",4
"lib2","SARS-CoV-2","CAAGGGAAACTACAAA",3,23.94,9.56,-1.27,0.16,1.66,1.06,0.01,">1 nonsynonymous","W106S Q144H",2
"lib2","SARS-CoV-2","CAAGGGAAGTGGAACT",2,6.24,10.65,-0.18,0.16,2.79,1.17,0.01,">1 nonsynonymous","S36A T140S",2
"lib2","SARS-CoV-2","CAAGGGAATTGCTATG",11,2.63,NA,NA,NA,NA,NA,NA,"stop","T15V Y35D F62P Q84* T100P N107M S139N S200N",8
"lib2","SARS-CoV-2","CAAGGGAATTTGCAGA",1,15.12,6.97,-3.87,0.44,1.5,1.02,0.05,">1 nonsynonymous","I28R A105H",2
"lib2","SARS-CoV-2","CAAGGGAGTACATTTA",3,63.76,10.04,-0.8,0.06,2.64,1.12,0,">1 nonsynonymous","C61G T85P",2
"lib2","SARS-CoV-2","CAAGGGATAAAGGAAA",9,62.46,9.74,-1.09,0.09,2.11,1.06,0,">1 nonsynonymous","T85G K94N E141Q T201C",4
"lib2","SARS-CoV-2","CAAGGGCAATGAAGCG",12,205.86,10.72,-0.12,0.03,2.88,1.03,0,">1 nonsynonymous","N58T I138L T201M",3
"lib2","SARS-CoV-2","CAAGGGCCCTGACCTT",5,11.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4Y C49T Y66H G86D",4
"lib2","SARS-CoV-2","CAAGGGCGGAGTATAA",2,20.54,7.09,-3.75,0.4,1.5,1.16,0.03,">1 nonsynonymous","G9V S41V E76G S113E N120F F126E",6
"lib2","SARS-CoV-2","CAAGGGCTATAAATGA",4,102.67,8.73,-2.11,0.07,2.97,1.1,0,">1 nonsynonymous","K128Y N157G",2
"lib2","SARS-CoV-2","CAAGGGGAAATATGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Q F44Q N120L",3
"lib2","SARS-CoV-2","CAAGGGGTGATGCGAC",9,156.42,10.79,-0.05,0.03,2.97,1.04,0,"1 nonsynonymous","N1H",1
"lib2","SARS-CoV-2","CAAGGGGTGCAATTGC",1,9.14,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","S19W S41V F167R S200F",4
"lib2","SARS-CoV-2","CAAGGGTAGTTTCAAG",5,44.51,10.19,-0.65,0.08,2.9,1.04,0,"1 nonsynonymous","S139V",1
"lib2","SARS-CoV-2","CAAGGGTTAGCATATA",2,15.89,10.55,-0.29,0.11,2.67,1.24,0.01,">1 nonsynonymous","A22D T201Y",2
"lib2","SARS-CoV-2","CAAGGGTTATTGTACA",1,16.05,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","T15N A89S K132D Y143N",4
"lib2","SARS-CoV-2","CAAGGTAAGCACCCTT",5,182.46,10.44,-0.4,0.04,2.91,1.06,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","CAAGGTAATGCACTAA",8,133.29,10.83,-0.01,0.07,2.89,1.09,0,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","CAAGGTACCCTCATAT",5,16.8,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D90L S139Y Q168L",3
"lib2","SARS-CoV-2","CAAGGTACGGAGGTCA",4,92.66,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5V K94T E135K",3
"lib2","SARS-CoV-2","CAAGGTAGACCCAAAA",2,17,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","A42G C102S K198L",3
"lib2","SARS-CoV-2","CAAGGTCAGGTGCCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F62E Y119*",2
"lib2","SARS-CoV-2","CAAGGTCATATGACCT",7,50.96,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N171S Y178P K198L",3
"lib2","SARS-CoV-2","CAAGGTCCTACCTACC",7,2.79,NA,NA,NA,NA,NA,NA,"stop","K56* N64P L95A G101E I142W V173D",6
"lib2","SARS-CoV-2","CAAGGTCTGTATGTTT",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D A81Y L95F N151L",4
"lib2","SARS-CoV-2","CAAGGTGTAAGTCGTG",10,243.42,9.68,-1.16,0.02,2.96,1.06,0,">1 nonsynonymous","V37T V77L K128T T170G",4
"lib2","SARS-CoV-2","CAAGGTGTACGTCCCG",6,50.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38S S45P C102H",3
"lib2","SARS-CoV-2","CAAGGTTAGCAGCCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9R T15V Y50S K128* L131C C150S Q176L",7
"lib2","SARS-CoV-2","CAAGGTTAGGTTGCAT",1,63.71,9.76,-1.08,0.06,2.75,1.04,0,">1 nonsynonymous","R16Y N118Y I138M",3
"lib2","SARS-CoV-2","CAAGGTTCCAACTATT",1,24.2,9.63,-1.2,0.13,1.94,1,0.01,">1 nonsynonymous","L38G K198A",2
"lib2","SARS-CoV-2","CAAGGTTCGCCACCAG",3,86.47,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R73P P177T",2
"lib2","SARS-CoV-2","CAAGGTTTGTTCAATG",7,135.1,9.35,-1.49,0.07,2.3,1.09,0,">1 nonsynonymous","T55C Y123C C195L",3
"lib2","SARS-CoV-2","CAAGTAAAAAATATAA",4,57.86,10.85,0.01,0.06,2.91,1.04,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","CAAGTAAAAACTCCTG",17,334.28,10.61,-0.22,0.03,2.98,1,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","CAAGTAAACCAATATT",5,40.17,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","G51N C61G P96M G146S",4
"lib2","SARS-CoV-2","CAAGTAAACGTAACTC",12,232.27,10.47,-0.37,0.03,2.89,1.06,0,">1 nonsynonymous","G9H V115L F134A",3
"lib2","SARS-CoV-2","CAAGTAAATTATATGA",5,11.27,7.27,-3.57,0.49,1.5,1,0.07,">1 nonsynonymous","E10M D90I A105S P149W",4
"lib2","SARS-CoV-2","CAAGTAACAAAACAAT",2,7.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172A",1
"lib2","SARS-CoV-2","CAAGTAACTAATCTAG",2,32.15,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y35H P82I G86C K128T",4
"lib2","SARS-CoV-2","CAAGTAACTACAAAAA",5,106.88,10.91,0.08,0.04,2.97,1.04,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","CAAGTAACTTTTCGTC",5,50.31,10.11,-0.72,0.09,2.76,1.06,0,">1 nonsynonymous","I2S E10C D90R",3
"lib2","SARS-CoV-2","CAAGTAAGAAAAATGA",1,50.17,10.75,-0.08,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAAGTAATAAGGATTG",1,20.64,9.2,-1.64,0.1,2.91,1,0,">1 nonsynonymous","T55D L60T V115L A145K",4
"lib2","SARS-CoV-2","CAAGTAATATTAAGAA",11,3.73,NA,NA,NA,NA,NA,NA,"stop","V11L D34P K94* S200F",4
"lib2","SARS-CoV-2","CAAGTAATCAAACCTT",5,46.56,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D90I V103I N151I N171K",4
"lib2","SARS-CoV-2","CAAGTAATTATGAGCC",1,39.15,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D34G V173K L183Q",3
"lib2","SARS-CoV-2","CAAGTACAATATAAGC",2,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I T201R",2
"lib2","SARS-CoV-2","CAAGTACAATCTAGTT",10,148.35,9.74,-1.09,0.06,2.74,1.04,0,">1 nonsynonymous","L5S V65L Y121K",3
"lib2","SARS-CoV-2","CAAGTACATCAATAGG",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N F12R S69L D75L N120K R179Y",6
"lib2","SARS-CoV-2","CAAGTACATCCCCATA",2,91.92,8.79,-2.05,0.09,2.46,1.06,0,">1 nonsynonymous","G146R S184K",2
"lib2","SARS-CoV-2","CAAGTACCTAAATCTT",4,31.56,9.84,-1,0.12,1.91,1.03,0.01,">1 nonsynonymous","F8H Y39F S184Y",3
"lib2","SARS-CoV-2","CAAGTACGGTATGATA",9,150.31,10.73,-0.1,0.05,2.88,1.12,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CAAGTACTGAAGGTGC",3,0.86,NA,NA,NA,NA,NA,NA,"stop","A33K S45E G86* D90S",4
"lib2","SARS-CoV-2","CAAGTACTGGACTATA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","N1K K26* Y35G K56G C102A G146V",6
"lib2","SARS-CoV-2","CAAGTAGCACCGCCCA",3,39.99,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R16F P96Y Y175M",3
"lib2","SARS-CoV-2","CAAGTAGCCATAAGGG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T Q84I Y121N",3
"lib2","SARS-CoV-2","CAAGTAGGGTACTGCC",1,13.66,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R136L C158V",2
"lib2","SARS-CoV-2","CAAGTAGTTCAACTAT",6,37.76,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V37L K48S N64K V77T Q84I W106D G117T G174Y",8
"lib2","SARS-CoV-2","CAAGTATAACTATGGA",16,151.93,10.62,-0.22,0.04,2.91,1.04,0,">1 nonsynonymous","K128M S139G",2
"lib2","SARS-CoV-2","CAAGTATATTAAGCCG",11,71.27,10.33,-0.5,0.05,2.86,1.02,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","CAAGTATCCCATTAAC",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G K26E C31T V180I",4
"lib2","SARS-CoV-2","CAAGTATTTATTTTGA",6,115.1,10.19,-0.64,0.08,2.46,1,0,"1 nonsynonymous","G51C",1
"lib2","SARS-CoV-2","CAAGTCAAAATCAAAC",3,48.97,11.07,0.23,0.06,2.97,1.01,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","CAAGTCAAGAAAGGAT",2,11.73,10.31,-0.53,0.06,3,1.01,0,">1 nonsynonymous","K87P N110L V153G",3
"lib2","SARS-CoV-2","CAAGTCACCATAAATG",16,44.91,8.2,-2.63,0.23,1.5,1.03,0.02,">1 nonsynonymous","L5C P96Y",2
"lib2","SARS-CoV-2","CAAGTCACCCGAGCCG",7,109.12,10.51,-0.32,0.05,2.9,1.08,0,"1 nonsynonymous","V52W",1
"lib2","SARS-CoV-2","CAAGTCACTCCTCTTA",1,9.32,7.31,-3.52,0.26,2.14,1.01,0.02,">1 nonsynonymous","I28R Y121L",2
"lib2","SARS-CoV-2","CAAGTCACTCGATAGG",3,3.27,NA,NA,NA,NA,NA,NA,"stop","P7* V77P A89T",3
"lib2","SARS-CoV-2","CAAGTCACTGATGTTT",7,6.94,NA,NA,NA,NA,NA,NA,"stop","I2N G9W V32L V37N S45T K56R C61H Y91*",8
"lib2","SARS-CoV-2","CAAGTCAGTTTCCAAA",14,1.29,NA,NA,NA,NA,NA,NA,"stop","V180*",1
"lib2","SARS-CoV-2","CAAGTCAGTTTGGACG",6,320.88,9.95,-0.89,0.05,2.53,1.02,0,">1 nonsynonymous","C6F A18Y",2
"lib2","SARS-CoV-2","CAAGTCATGACGCAAA",4,99.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36W N92R",2
"lib2","SARS-CoV-2","CAAGTCATTAGATTCT",6,33.7,6.74,-4.09,0.25,1.5,1.13,0.01,">1 nonsynonymous","V20L G116I",2
"lib2","SARS-CoV-2","CAAGTCCAAAAACTTA",7,54.54,6,-4.84,1.39,1.5,1.21,0.03,">1 nonsynonymous","E10T F44C I88W D137S",4
"lib2","SARS-CoV-2","CAAGTCCATATGATCC",18,127.8,9.31,-1.53,0.11,1.82,1.11,0,">1 nonsynonymous","E135T Q144Y",2
"lib2","SARS-CoV-2","CAAGTCCATGACAGAA",2,33.51,9.35,-1.48,0.11,2.82,1.07,0,">1 nonsynonymous","A42C K87D N120A",3
"lib2","SARS-CoV-2","CAAGTCCGAATTCCCA",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K S139G F167L",3
"lib2","SARS-CoV-2","CAAGTCCGATGCAAAA",5,139.4,10.31,-0.53,0.04,2.9,1.06,0,">1 nonsynonymous","V37T N107C",2
"lib2","SARS-CoV-2","CAAGTCCGGAAAAACC",1,1.48,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAAGTCCGGATGAACT",4,18.08,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","T55S C102L V103L K198R",4
"lib2","SARS-CoV-2","CAAGTCCTAGTAGAAA",4,10.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V K87F V115S I142G P149C",5
"lib2","SARS-CoV-2","CAAGTCCTGAATAGGG",8,125.01,9.8,-1.03,0.09,1.87,1.05,0,">1 nonsynonymous","T46M P82I",2
"lib2","SARS-CoV-2","CAAGTCGGAATGCGAA",8,106.22,10.2,-0.63,0.04,2.81,1.05,0,">1 nonsynonymous","R27P L60N K198V",3
"lib2","SARS-CoV-2","CAAGTCTATAAGCAAT",3,35,8.88,-1.96,0.12,2.63,1.19,0.01,">1 nonsynonymous","P7E A14K D98S A145K",4
"lib2","SARS-CoV-2","CAAGTCTCAGAAAAAG",10,154.83,6.77,-4.07,0.19,1.5,1.13,0,">1 nonsynonymous","V37E F44I D59L Y175S A192L",5
"lib2","SARS-CoV-2","CAAGTCTCTTGAAGAA",6,88.15,10.03,-0.81,0.05,2.89,1.09,0,">1 nonsynonymous","C6T V173A",2
"lib2","SARS-CoV-2","CAAGTCTGAAAAAAAA",6,17.51,8.47,-2.36,0.17,1.86,1.02,0.01,">1 nonsynonymous","N1M S36C Q168I T201E",4
"lib2","SARS-CoV-2","CAAGTCTGCGACAGAC",2,18.44,6,-4.84,2,3,1.18,0,">1 nonsynonymous","R25S A33R I88R R127V E141R",5
"lib2","SARS-CoV-2","CAAGTCTTAACACCAT",2,31.9,6,-4.84,1.92,1.5,1.15,0.01,">1 nonsynonymous","I80S F99M",2
"lib2","SARS-CoV-2","CAAGTCTTCACTTTCC",1,0.56,NA,NA,NA,NA,NA,NA,"stop","P7I T46*",2
"lib2","SARS-CoV-2","CAAGTCTTCGAGTCAT",15,270.36,10.8,-0.03,0.03,2.95,1.03,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","CAAGTGAAACAACAGA",7,270.41,9.6,-1.23,0.08,1.89,1.09,0,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","CAAGTGAACATAATAC",2,10.97,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S36P V103H",2
"lib2","SARS-CoV-2","CAAGTGAACCGGTCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T85* G116T",2
"lib2","SARS-CoV-2","CAAGTGAATTTCACTT",5,42.2,9.94,-0.9,0.08,2.64,1.03,0,">1 nonsynonymous","V37H A42S E186L",3
"lib2","SARS-CoV-2","CAAGTGACCTAATTGT",4,20.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A89M V103R Y119F S200L",4
"lib2","SARS-CoV-2","CAAGTGATAACCACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","CAAGTGATAATCGCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S F44E Q144L",3
"lib2","SARS-CoV-2","CAAGTGCACACCTGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","CAAGTGCACACTAGAG",6,228.75,9.4,-1.44,0.05,2.76,1.04,0,">1 nonsynonymous","C61K N118V I138E",3
"lib2","SARS-CoV-2","CAAGTGCAGAACTTAC",8,115.42,10.57,-0.26,0.05,2.97,1.04,0,">1 nonsynonymous","S29T P96S",2
"lib2","SARS-CoV-2","CAAGTGCAGGTGTCGC",2,11.47,10.24,-0.6,0.07,2.98,1,0,"1 nonsynonymous","L125G",1
"lib2","SARS-CoV-2","CAAGTGCATGTTACAG",23,129.18,6,-4.84,1.21,1.5,1.2,0.02,">1 nonsynonymous","V20L C49L",2
"lib2","SARS-CoV-2","CAAGTGCATTACTTGA",22,83.28,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","K56N W106T V182K",3
"lib2","SARS-CoV-2","CAAGTGCCATTCGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* F44G V65K G86L N92Q P133R V180L",7
"lib2","SARS-CoV-2","CAAGTGCCTAAAAAAT",21,115.08,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N4L W106G",2
"lib2","SARS-CoV-2","CAAGTGCGCAAAATCG",5,37.14,10.32,-0.52,0.06,2.85,1.1,0,">1 nonsynonymous","A14S T46W L122C",3
"lib2","SARS-CoV-2","CAAGTGCGCTTCATCC",3,72.7,10.45,-0.38,0.04,2.96,1.06,0,">1 nonsynonymous","N120W S147L",2
"lib2","SARS-CoV-2","CAAGTGCTATCAACGA",1,16.97,10.65,-0.19,0.11,2.87,1.15,0,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","CAAGTGCTGCTTCCTG",5,18.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49M F62R G83R E141Y",4
"lib2","SARS-CoV-2","CAAGTGCTTAAGCCGG",8,110,6,-4.84,1.58,3,1.17,0,">1 nonsynonymous","V11G G116S P161F",3
"lib2","SARS-CoV-2","CAAGTGCTTCACCGTT",2,25.52,8.68,-2.15,0.12,2.15,1.09,0.01,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","CAAGTGGCTTATATGA",7,51.22,7.97,-2.86,0.24,1.5,1.02,0.02,">1 nonsynonymous","Y91R E135R T201A",3
"lib2","SARS-CoV-2","CAAGTGGGAATGCGGA",4,28.71,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V37E C61N C158W",3
"lib2","SARS-CoV-2","CAAGTGGGACGTGAAT",1,55.34,10.3,-0.54,0.03,2.88,1.07,0,">1 nonsynonymous","E141I G155Q",2
"lib2","SARS-CoV-2","CAAGTGGTTTCCCACG",1,49.23,10.12,-0.72,0.03,2.91,1.1,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","CAAGTGTATAAGTATC",2,28.9,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C6F I142S Y178G A190I",4
"lib2","SARS-CoV-2","CAAGTGTGAATTGTGC",9,122.21,8.29,-2.55,0.14,1.85,1.08,0.01,">1 nonsynonymous","N4L T170I",2
"lib2","SARS-CoV-2","CAAGTGTTTAACTGTA",15,114.68,8.19,-2.64,0.09,2.07,1.1,0,">1 nonsynonymous","P161N V173W",2
"lib2","SARS-CoV-2","CAAGTTAAATTTAATA",8,106.61,9.82,-1.01,0.09,2.13,1.03,0,">1 nonsynonymous","G51E T140Y",2
"lib2","SARS-CoV-2","CAAGTTAAGATCTAGG",5,24.11,6.12,-4.71,0.59,1.5,1.09,0.01,">1 nonsynonymous","R27V R127W V173R",3
"lib2","SARS-CoV-2","CAAGTTAATATGGGAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","T55S N118*",2
"lib2","SARS-CoV-2","CAAGTTAATATTTTAT",5,45.02,10.61,-0.22,0.03,2.92,1.09,0,">1 nonsynonymous","L187K C195N",2
"lib2","SARS-CoV-2","CAAGTTACACGCACCT",6,81.35,10.49,-0.34,0.03,2.97,1.04,0,"1 nonsynonymous","L125F",1
"lib2","SARS-CoV-2","CAAGTTACACTTGCTA",4,32.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F47D N120L",2
"lib2","SARS-CoV-2","CAAGTTACCAGCATAC",2,20.58,7.92,-2.92,0.29,1.62,1.29,0.03,">1 nonsynonymous","T46F A89L",2
"lib2","SARS-CoV-2","CAAGTTAGAAAGGACA",20,228.72,8.44,-2.39,0.14,1.84,1.14,0.01,">1 nonsynonymous","S53F D90S P133S G174E",4
"lib2","SARS-CoV-2","CAAGTTATACAACAAA",2,8.33,10.65,-0.19,0.33,2.36,1,0.03,">1 nonsynonymous","V103D K128Q",2
"lib2","SARS-CoV-2","CAAGTTATCCAATGTA",13,13.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F T85H R136A P177S",4
"lib2","SARS-CoV-2","CAAGTTCAAATTTCAG",8,46.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y21V A81T G101R F160A N171L",5
"lib2","SARS-CoV-2","CAAGTTCACCCAGCCA",6,7.95,6.14,-4.7,1.18,1.5,1.06,0.07,">1 nonsynonymous","G86D N107C",2
"lib2","SARS-CoV-2","CAAGTTCCATTCACTA",1,5.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V153C Y159A",2
"lib2","SARS-CoV-2","CAAGTTCCGAAAACTG",1,38.28,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","R136M Y159C",2
"lib2","SARS-CoV-2","CAAGTTCCTGGCCGCA",2,45.49,9.85,-0.99,0.09,2.28,1.11,0,">1 nonsynonymous","F8C L60T",2
"lib2","SARS-CoV-2","CAAGTTCTTCACCCGC",2,49.08,10.74,-0.09,0.06,2.91,1.14,0,"1 nonsynonymous","K199Y",1
"lib2","SARS-CoV-2","CAAGTTGAACGAGTAT",19,264.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N118P P177N",2
"lib2","SARS-CoV-2","CAAGTTGATATATCTA",15,221.81,9.5,-1.34,0.07,2.09,1.05,0,">1 nonsynonymous","A105V G116H N120A",3
"lib2","SARS-CoV-2","CAAGTTGATTTAACTA",2,24.1,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L125Y P133G P161C",3
"lib2","SARS-CoV-2","CAAGTTGCACGATTAC",5,115.01,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14T L38Q N157H",3
"lib2","SARS-CoV-2","CAAGTTGCGCCAAAAA",5,12.54,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S69R R124S",2
"lib2","SARS-CoV-2","CAAGTTGGATATTTCA",5,13.9,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C61L D98I G155C V181H",4
"lib2","SARS-CoV-2","CAAGTTTATAGAATGG",2,16.35,8.06,-2.77,0.18,1.7,1.08,0,">1 nonsynonymous","T85A D90Y Y119P P149W",4
"lib2","SARS-CoV-2","CAAGTTTCGATTAAAT",9,64.03,9.09,-1.75,0.13,1.56,1.09,0.01,">1 nonsynonymous","P96R I142F",2
"lib2","SARS-CoV-2","CAAGTTTGACTACAAA",5,103.26,9.53,-1.31,0.05,1.91,1.09,0,">1 nonsynonymous","Y35S E135S S164T",3
"lib2","SARS-CoV-2","CAAGTTTGCAGCATAT",3,29.28,10.59,-0.24,0.05,3,1.01,0,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","CAAGTTTGGATCAAGG",1,14.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25M T46S Y119K",3
"lib2","SARS-CoV-2","CAAGTTTTATCACGAG",2,109.22,10.57,-0.27,0.03,2.9,1.07,0,">1 nonsynonymous","V52I C61F T148F F160N",4
"lib2","SARS-CoV-2","CAATAAAAAAGTCAAA",2,26.76,6.74,-4.1,0.43,1.5,1.24,0.02,"1 nonsynonymous","K94W",1
"lib2","SARS-CoV-2","CAATAAAAATATTTAA",3,31.94,6.14,-4.69,0.75,3,1.24,0.03,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","CAATAAAACAAATCTG",1,26.89,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","D97W C158M G174R",3
"lib2","SARS-CoV-2","CAATAAAACAATAAGT",1,0.65,NA,NA,NA,NA,NA,NA,"stop","N4W G9*",2
"lib2","SARS-CoV-2","CAATAAAACATAGTCG",2,44.33,9.08,-1.75,0.08,2.77,1.04,0,">1 nonsynonymous","Q79L G174K",2
"lib2","SARS-CoV-2","CAATAAAACATCAATT",17,132.39,6.28,-4.56,0.49,1.5,1.22,0.01,">1 nonsynonymous","A89D P96T",2
"lib2","SARS-CoV-2","CAATAAAAGAAAAGTC",8,83.56,10.29,-0.55,0.07,2.8,1.04,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","CAATAAAAGATCCGCT",4,20.61,9.57,-1.27,0.1,1.98,1.11,0.01,">1 nonsynonymous","V77R E141A",2
"lib2","SARS-CoV-2","CAATAAACAAAGACCT",13,242.14,10.62,-0.21,0.03,2.92,1.07,0,">1 nonsynonymous","L60I G116E",2
"lib2","SARS-CoV-2","CAATAAACACTGATAT",3,5.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K F156L",2
"lib2","SARS-CoV-2","CAATAAACCGAAAAAA",1,0.56,NA,NA,NA,NA,NA,NA,"stop","K56S L131V Q144L C158R P197*",5
"lib2","SARS-CoV-2","CAATAAACCTCGTTTA",4,30.36,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","D59Y D68K G86F G116S",4
"lib2","SARS-CoV-2","CAATAAACGACAATAT",5,50.76,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L60A T148F G172W",3
"lib2","SARS-CoV-2","CAATAAACGTCTACAT",1,7.46,6.26,-4.58,0.7,3,1.2,0.02,">1 nonsynonymous","K87R V115T R127D E135K",4
"lib2","SARS-CoV-2","CAATAAACTAATTAAC",8,23.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137M",1
"lib2","SARS-CoV-2","CAATAAACTTCATGAA",10,151.41,10.51,-0.32,0.04,2.95,1.05,0,">1 nonsynonymous","G9M I104L S147R",3
"lib2","SARS-CoV-2","CAATAAAGCATGCGGA",2,43.7,10.83,0,0.08,2.83,1.05,0,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","CAATAAAGGGAAGATA",2,11.84,6.77,-4.06,0.47,1.5,1.08,0.03,">1 nonsynonymous","N64Y N107P S113L N130Q",4
"lib2","SARS-CoV-2","CAATAAAGGTGAGAGG",4,0.04,NA,NA,NA,NA,NA,NA,"stop","R16K L57* P197A",3
"lib2","SARS-CoV-2","CAATAAATAACGACGC",3,67.15,10.63,-0.2,0.05,2.93,1.02,0,"1 nonsynonymous","E135A",1
"lib2","SARS-CoV-2","CAATAAATAATACCTA",12,114.89,6.11,-4.72,0.66,1.5,1.18,0.01,">1 nonsynonymous","V11R S36R Y119R",3
"lib2","SARS-CoV-2","CAATAAATAGCCACTT",4,1.06,NA,NA,NA,NA,NA,NA,"stop","L95C F134* T148R",3
"lib2","SARS-CoV-2","CAATAAATATCTTTCC",5,151.79,8.73,-2.1,0.08,2.51,1.08,0,">1 nonsynonymous","L60S C61Y T170P",3
"lib2","SARS-CoV-2","CAATAAATATGCCATC",6,35.56,6,-4.84,2,1.5,1.03,0,"1 nonsynonymous","Y93A",1
"lib2","SARS-CoV-2","CAATAAATCCCTTAAC",6,1.82,NA,NA,NA,NA,NA,NA,"stop","Q84* R124T",2
"lib2","SARS-CoV-2","CAATAAATGACGAATC",2,34.88,9.55,-1.28,0.08,2.87,1.02,0,">1 nonsynonymous","I2H Q176A",2
"lib2","SARS-CoV-2","CAATAAATGGATAATC",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59V L95H L162M T201K",4
"lib2","SARS-CoV-2","CAATAAATTCAAACCG",1,63.79,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L38S N64E G86L",3
"lib2","SARS-CoV-2","CAATAAATTGTGGAGA",3,5.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G101N R136D F185S",3
"lib2","SARS-CoV-2","CAATAAATTTAATTAT",2,5.79,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","D68Y N110I R179I",3
"lib2","SARS-CoV-2","CAATAAATTTCTGAGC",2,39.11,10.11,-0.73,0.07,2.72,1.13,0,">1 nonsynonymous","D98I V173W K198V",3
"lib2","SARS-CoV-2","CAATAACAAATCCACA",13,183.01,10.05,-0.78,0.07,2.35,1.01,0,">1 nonsynonymous","N13M G83L",2
"lib2","SARS-CoV-2","CAATAACACTAACGCC",1,13.82,10.32,-0.51,0.07,2.92,1.02,0,">1 nonsynonymous","D97L D98Y I104L",3
"lib2","SARS-CoV-2","CAATAACACTGTTTAA",2,46.56,8.37,-2.47,0.14,2.42,1.1,0.01,">1 nonsynonymous","T63Y T140R N157M",3
"lib2","SARS-CoV-2","CAATAACAGATTACAG",10,12.15,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A18V V103G S129T",3
"lib2","SARS-CoV-2","CAATAACAGGCCCGAG",14,94.08,6,-4.84,2,3,1.14,0,">1 nonsynonymous","W23L D75Q I80N N120L G174L",5
"lib2","SARS-CoV-2","CAATAACATACAGCCA",3,1.91,NA,NA,NA,NA,NA,NA,"stop","Q84* D90T E141S G174R C195E",5
"lib2","SARS-CoV-2","CAATAACATAGCTTAA",2,31.66,10.84,0,0.07,2.89,1.09,0,"1 nonsynonymous","A42G",1
"lib2","SARS-CoV-2","CAATAACATCGTAATC",3,0,NA,NA,NA,NA,NA,NA,"stop","I28* V173F",2
"lib2","SARS-CoV-2","CAATAACCAAACTCAA",1,10.2,8.07,-2.76,0.3,1.5,1.12,0.04,">1 nonsynonymous","T3E A18T Y165L",3
"lib2","SARS-CoV-2","CAATAACCCACTTGCT",3,51.2,10.27,-0.57,0.06,2.84,1.04,0,">1 nonsynonymous","F44I L60K",2
"lib2","SARS-CoV-2","CAATAACGAACACTAC",1,7.27,10.4,-0.44,0.17,2.72,1.3,0.01,">1 nonsynonymous","I2V T15E S36D K87T",4
"lib2","SARS-CoV-2","CAATAACGCGATACCG",16,78.27,6,-4.84,1.92,1.5,1.14,0.01,">1 nonsynonymous","C49I N64I A81F I88M S113F G146E K199L",7
"lib2","SARS-CoV-2","CAATAACTAAATACTT",2,5.62,10.94,0.11,0.07,3,1.03,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","CAATAACTAGCCTCTT",3,30.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Y C150N",2
"lib2","SARS-CoV-2","CAATAACTGAGTAAAA",8,39.51,6.61,-4.22,0.64,1.5,1.1,0.06,">1 nonsynonymous","V20A C49L",2
"lib2","SARS-CoV-2","CAATAACTTACCAAGT",4,75.6,10.92,0.08,0.05,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATAACTTCACTTGC",3,12.91,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I28K V173N V180D",3
"lib2","SARS-CoV-2","CAATAAGAATGAATAA",8,34.48,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N1H E10Q T46I C61H F70K L122V",6
"lib2","SARS-CoV-2","CAATAAGACATCCCCA",1,21.97,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","G9T Y39F I80V F99C K128C T140P",6
"lib2","SARS-CoV-2","CAATAAGAGAGAGTAA",7,61.59,8.93,-1.91,0.14,1.5,1.12,0.01,"1 nonsynonymous","C102Y",1
"lib2","SARS-CoV-2","CAATAAGAGATAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122G S129V Y178I F185S T201R",5
"lib2","SARS-CoV-2","CAATAAGAGGGGACAT",4,2.68,NA,NA,NA,NA,NA,NA,"stop","R27W S41K F47I S139G F160*",5
"lib2","SARS-CoV-2","CAATAAGATTGCAACC",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L A105L",2
"lib2","SARS-CoV-2","CAATAAGCCATTTCCT",6,1.76,NA,NA,NA,NA,NA,NA,"stop","R25* E141R",2
"lib2","SARS-CoV-2","CAATAAGCCGCACGAA",5,223.86,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","G172I",1
"lib2","SARS-CoV-2","CAATAAGGCTGAATTG",3,34.62,8.47,-2.36,0.09,2.97,1.06,0,">1 nonsynonymous","K48L N171R",2
"lib2","SARS-CoV-2","CAATAAGTACAACCTA",5,12.86,8.56,-2.28,0.12,2.98,1.04,0.01,">1 nonsynonymous","T15Q K87T I142R",3
"lib2","SARS-CoV-2","CAATAAGTCACGATAC",2,23.19,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","N4L Y93R",2
"lib2","SARS-CoV-2","CAATAAGTGAATGATT",1,21.6,6.33,-4.51,0.57,1.57,1.12,0.02,">1 nonsynonymous","V37R L95G L131P T201N",4
"lib2","SARS-CoV-2","CAATAAGTGACAAAAT",2,59.34,10.9,0.07,0.04,2.95,1.06,0,"1 nonsynonymous","T63A",1
"lib2","SARS-CoV-2","CAATAAGTGACTAAAT",2,52.13,10.21,-0.62,0.04,2.93,1.02,0,">1 nonsynonymous","Y39D K56R S69T",3
"lib2","SARS-CoV-2","CAATAAGTGTCATAGA",4,1.59,NA,NA,NA,NA,NA,NA,"stop","I2D K87* V103R N171M",4
"lib2","SARS-CoV-2","CAATAAGTTAGTTGAC",4,0.85,NA,NA,NA,NA,NA,NA,"stop","N40A T63* N110L",3
"lib2","SARS-CoV-2","CAATAATAAAACGACT",22,40.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181Q",1
"lib2","SARS-CoV-2","CAATAATAACACAATA",3,89.27,9.84,-0.99,0.05,2.68,1.09,0,">1 nonsynonymous","N30L N120Y",2
"lib2","SARS-CoV-2","CAATAATAAGGAAGTT",1,89.97,9.91,-0.92,0.05,2.46,1.02,0,">1 nonsynonymous","I28E A42G",2
"lib2","SARS-CoV-2","CAATAATACACACGTA",10,104.25,6,-4.84,1.03,1.5,1.14,0.01,">1 nonsynonymous","C61H G83R Y165E",3
"lib2","SARS-CoV-2","CAATAATAGACATAGG",1,11.35,9.84,-0.99,0.09,2.11,1.02,0,">1 nonsynonymous","C6S N13S F62G",3
"lib2","SARS-CoV-2","CAATAATATAGCTGGC",2,27.94,10.89,0.06,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATAATCCAAACTAT",1,50.08,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36M L95K G166L",3
"lib2","SARS-CoV-2","CAATAATCCAACAACA",6,40.14,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","T3L F44R G101W",3
"lib2","SARS-CoV-2","CAATAATCCACAAACC",9,41.9,8.04,-2.79,0.27,1.73,1.14,0.03,">1 nonsynonymous","R78W I88M T170K",3
"lib2","SARS-CoV-2","CAATAATCCATTATCA",5,51.44,9.7,-1.14,0.11,2.11,1,0,">1 nonsynonymous","A14C K132L P149W",3
"lib2","SARS-CoV-2","CAATAATCTCTTGGCG",2,34.89,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","F8E G101W K128A G146V",4
"lib2","SARS-CoV-2","CAATAATGAATTATTT",4,35.8,10.49,-0.35,0.05,2.88,1.12,0,">1 nonsynonymous","T46N Y175F",2
"lib2","SARS-CoV-2","CAATAATGACCCACCG",3,3.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137W",1
"lib2","SARS-CoV-2","CAATAATGCCGCAAAA",21,164.55,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C102H Y165W Y178H",3
"lib2","SARS-CoV-2","CAATAATGGAAAGTAA",2,28.12,10.09,-0.74,0.09,2.86,1.08,0,"1 nonsynonymous","I104Q",1
"lib2","SARS-CoV-2","CAATAATTAATATATG",5,58.15,10.78,-0.06,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATAATTTCAATTAA",2,30.31,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","Y39M C102R E141I Y159A",4
"lib2","SARS-CoV-2","CAATACAAAAGTAATT",2,43.49,9.85,-0.98,0.11,2.11,1.04,0,">1 nonsynonymous","F62I L122E S139I T201L",4
"lib2","SARS-CoV-2","CAATACAAACCGGAGC",9,13.09,7.62,-3.22,0.29,1.5,1.13,0.03,">1 nonsynonymous","D34N D112R",2
"lib2","SARS-CoV-2","CAATACAAAGACTCGC",1,10.82,8.53,-2.3,0.13,2.98,1,0,">1 nonsynonymous","F44P F126T",2
"lib2","SARS-CoV-2","CAATACAATAAAAGTC",3,10.57,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","T15P N107A C158T",3
"lib2","SARS-CoV-2","CAATACAATAGAACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L122K A145N N157A K198P S200*",5
"lib2","SARS-CoV-2","CAATACAATCCCCCCT",7,72.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12I T85L A105D",3
"lib2","SARS-CoV-2","CAATACAATGTTAAAA",2,18.88,10.82,-0.02,0.06,2.98,1.02,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","CAATACACAAAGTAGA",6,255.41,9.73,-1.11,0.05,2.65,1.03,0,">1 nonsynonymous","L60G Y121I",2
"lib2","SARS-CoV-2","CAATACACATTTCTGC",8,98.35,6.75,-4.09,0.32,1.5,1.14,0.01,">1 nonsynonymous","F12N D59S Y121L V173N",4
"lib2","SARS-CoV-2","CAATACACGACATCGA",8,116.02,10.65,-0.19,0.02,2.92,1.06,0,"1 nonsynonymous","V180I",1
"lib2","SARS-CoV-2","CAATACAGCATAAAAG",7,140.93,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I28K G86F N110V N118R",4
"lib2","SARS-CoV-2","CAATACAGCCTTATAA",2,149.9,9.37,-1.47,0.08,2.2,1.06,0,">1 nonsynonymous","G9W F62S L122S S139R N151C G174S",6
"lib2","SARS-CoV-2","CAATACATAGCAGATT",7,23.49,8.08,-2.76,0.37,1.5,1.03,0.05,">1 nonsynonymous","C6I T100A P133G",3
"lib2","SARS-CoV-2","CAATACATGAATTTAT",3,16.02,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S19G S53R C61P S184D",4
"lib2","SARS-CoV-2","CAATACATTGGCAAGC",1,11.34,7.5,-3.33,0.53,1.5,1,0.06,">1 nonsynonymous","V37T Y91G G117L Y178R",4
"lib2","SARS-CoV-2","CAATACCAATGCATAA",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F L95S S129P T140K",4
"lib2","SARS-CoV-2","CAATACCATAACGTGT",4,17.02,9.44,-1.39,0.2,1.75,1.1,0.02,">1 nonsynonymous","C6S Y39G D98H",3
"lib2","SARS-CoV-2","CAATACCCAAACGCAG",5,90.42,8,-2.83,0.11,2.43,1.04,0,"1 nonsynonymous","G172A",1
"lib2","SARS-CoV-2","CAATACCCAAATGACC",14,112.4,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C61P C150Y",2
"lib2","SARS-CoV-2","CAATACCCACAGTGCT",19,57.01,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C49Y G83F A89I F160M",4
"lib2","SARS-CoV-2","CAATACCCCGCTACGC",7,175.6,10.7,-0.14,0.03,2.97,1.04,0,">1 nonsynonymous","I28L D97L V115W",3
"lib2","SARS-CoV-2","CAATACCCTAAGGTAT",4,7.66,8.89,-1.95,0.21,1.66,1.03,0.04,">1 nonsynonymous","C61P V103L",2
"lib2","SARS-CoV-2","CAATACCCTTAACCTA",3,9.73,10.79,-0.05,0.07,2.83,1.19,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAATACCGAATTCATC",5,1.67,NA,NA,NA,NA,NA,NA,"stop","F134V L162*",2
"lib2","SARS-CoV-2","CAATACCGACACCACT",6,124.61,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P7I L38P C102N P161I",4
"lib2","SARS-CoV-2","CAATACCGGGTATCTA",17,400.03,8.22,-2.62,0.13,2.45,1.06,0.01,">1 nonsynonymous","Y143R K199M",2
"lib2","SARS-CoV-2","CAATACCTACTAATAA",3,19.31,9.82,-1.01,0.22,1.72,1.02,0.03,"1 nonsynonymous","L131S",1
"lib2","SARS-CoV-2","CAATACCTTACATGCT",1,13.63,10.77,-0.07,0.16,2.71,1.2,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAATACGAACTAATCG",3,75.33,10.25,-0.58,0.05,2.82,1.04,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","CAATACGAATACCTGA",3,80.58,10.21,-0.62,0.12,2.33,1.02,0.01,"1 nonsynonymous","Y91G",1
"lib2","SARS-CoV-2","CAATACGAATACGAGA",1,33.2,10.77,-0.06,0.07,2.88,1.14,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","CAATACGAATGGATTT",8,22.83,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D90L F99N R127N Q163T",4
"lib2","SARS-CoV-2","CAATACGACAGATAGC",2,68.36,9.63,-1.2,0.1,1.98,1.1,0,">1 nonsynonymous","R27E L38G F160R T201Q",4
"lib2","SARS-CoV-2","CAATACGCTACAGCCA",4,23.98,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C6G K56I P96K V181L",4
"lib2","SARS-CoV-2","CAATACGTAGACATCA",9,88.24,10.53,-0.3,0.05,2.9,1.05,0,">1 nonsynonymous","G51R K56T G152R",3
"lib2","SARS-CoV-2","CAATACGTTAGAAATA",7,173.4,10.47,-0.36,0.05,2.87,1.09,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CAATACTAGAAGCCTG",1,11.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55S Y91T G117Y V181H",4
"lib2","SARS-CoV-2","CAATACTATAAATAAA",20,4.84,NA,NA,NA,NA,NA,NA,"stop","D98C G117L I138* G166W",4
"lib2","SARS-CoV-2","CAATACTCTATTTATT",3,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y159E K198V",2
"lib2","SARS-CoV-2","CAATACTCTGCGCACA",4,56.26,10.88,0.04,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATACTGCCTTACCC",6,0,NA,NA,NA,NA,NA,NA,"stop","T15L K26D D34C F62* G196W S200Y",6
"lib2","SARS-CoV-2","CAATACTGTTTTAGCC",4,4.62,NA,NA,NA,NA,NA,NA,"stop","R16V D90Y G172*",3
"lib2","SARS-CoV-2","CAATACTTAACAAATA",3,89.1,10.48,-0.36,0.04,2.94,1.05,0,">1 nonsynonymous","P7S A67I",2
"lib2","SARS-CoV-2","CAATACTTTTCGAGAC",2,5.56,6,-4.84,2,3,1.01,0,">1 nonsynonymous","Y91E P133L",2
"lib2","SARS-CoV-2","CAATAGAAAGAAACTA",1,5.18,6.65,-4.19,0.14,2.99,1.03,0,">1 nonsynonymous","D68W K87Y D112S S200C",4
"lib2","SARS-CoV-2","CAATAGAACATAGAAT",7,94.43,10.18,-0.66,0.05,2.88,1.06,0,">1 nonsynonymous","G9L K48V",2
"lib2","SARS-CoV-2","CAATAGAACCATTACA",11,42.09,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14C L95S G174S",3
"lib2","SARS-CoV-2","CAATAGAACGCTTAGC",5,29.94,9.47,-1.37,0.19,1.78,1.17,0.02,">1 nonsynonymous","N13F S45I",2
"lib2","SARS-CoV-2","CAATAGAACGTTTGAG",10,69.11,10.79,-0.05,0.05,2.88,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATAGAAGCCTGGTG",2,50.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40L G101P",2
"lib2","SARS-CoV-2","CAATAGAATCAAAAGA",3,26.13,7.19,-3.65,0.41,1.63,1.21,0.04,">1 nonsynonymous","A22W Y35K N58I S69N K94F V173R",6
"lib2","SARS-CoV-2","CAATAGAATGACGCCC",5,0.09,NA,NA,NA,NA,NA,NA,"stop","G9* V37R S139W N157W Y175M V180K",6
"lib2","SARS-CoV-2","CAATAGACACTTATAC",2,5.78,9.78,-1.06,0.09,2.04,1,0,">1 nonsynonymous","P7Y S69Q S129A",3
"lib2","SARS-CoV-2","CAATAGACTGCGCGCA",6,66.29,10.7,-0.14,0.05,2.88,1.11,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CAATAGACTTAAGTCT",19,550.87,10.55,-0.28,0.03,2.93,1.05,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","CAATAGAGGAGAACGT",2,59.54,9.61,-1.22,0.05,2.03,1.01,0,"1 nonsynonymous","A105N",1
"lib2","SARS-CoV-2","CAATAGAGGATATAAC",3,0.84,NA,NA,NA,NA,NA,NA,"stop","C6L G83C L162*",3
"lib2","SARS-CoV-2","CAATAGAGGGAACCCA",13,157.13,6.82,-4.01,0.23,1.5,1.13,0.01,">1 nonsynonymous","G51R S113R Q168T",3
"lib2","SARS-CoV-2","CAATAGATAATAAAAA",6,80.41,6,-4.84,0.69,1.5,1.1,0,">1 nonsynonymous","V37K P96L Y159Q",3
"lib2","SARS-CoV-2","CAATAGATAGAAGAAT",4,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S V103D",2
"lib2","SARS-CoV-2","CAATAGATTAAAGGAA",9,123.27,10.7,-0.14,0.04,2.91,1.09,0,">1 nonsynonymous","T63G L122Y P149K",3
"lib2","SARS-CoV-2","CAATAGATTCTAATCC",7,1.07,NA,NA,NA,NA,NA,NA,"stop","G86F S113E Y175*",3
"lib2","SARS-CoV-2","CAATAGATTTTCCCAT",8,17.69,6.94,-3.89,0.43,1.5,1.2,0.05,"1 nonsynonymous","V182L",1
"lib2","SARS-CoV-2","CAATAGCAAATATTTC",10,185.39,10.6,-0.24,0.05,2.91,1.11,0,">1 nonsynonymous","S41M S200Y",2
"lib2","SARS-CoV-2","CAATAGCAGAGGCTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","L57* G101S G116V I138Q G146M",5
"lib2","SARS-CoV-2","CAATAGCCACACGAGG",4,0.09,NA,NA,NA,NA,NA,NA,"stop","L5P S45G Y175*",3
"lib2","SARS-CoV-2","CAATAGCCATTACCAA",18,182.15,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y35S R179F",2
"lib2","SARS-CoV-2","CAATAGCGAAGATATA",4,52.27,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V20M F167I",2
"lib2","SARS-CoV-2","CAATAGCGCTTCAGTA",4,68.86,10.3,-0.54,0.05,2.5,1.02,0,">1 nonsynonymous","K94S T201Y",2
"lib2","SARS-CoV-2","CAATAGGAACGCCGAT",9,136.38,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","P82V D90K K114A N118D Q176M L183V",6
"lib2","SARS-CoV-2","CAATAGGACCCCACGG",4,110.88,10.81,-0.03,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATAGGACCCGTAAT",2,39.44,10.69,-0.15,0.05,2.96,1.03,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","CAATAGGACTTCATAG",2,114.72,10.8,-0.04,0.03,2.93,1.07,0,">1 nonsynonymous","N64F T201F",2
"lib2","SARS-CoV-2","CAATAGGCATAGGATC",2,57.22,8.99,-1.84,0.07,2.92,1.08,0,">1 nonsynonymous","K87T T170H",2
"lib2","SARS-CoV-2","CAATAGGTTACAAGCA",2,7.8,8.04,-2.79,0.42,1.5,1.07,0.06,">1 nonsynonymous","R25N N58M S184K",3
"lib2","SARS-CoV-2","CAATAGGTTCTAACCA",3,12.7,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15L G101T",2
"lib2","SARS-CoV-2","CAATAGGTTGGTTGTT",4,48.44,10.1,-0.74,0.03,2.91,1.04,0,"1 nonsynonymous","G155Y",1
"lib2","SARS-CoV-2","CAATAGTAGAATGTAG",11,44.02,6.42,-4.42,0.51,1.5,1.26,0.02,">1 nonsynonymous","F8G C31R T85L",3
"lib2","SARS-CoV-2","CAATAGTCTTTTGCCA",8,25.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1F V11I C31Y Q84D F167S",5
"lib2","SARS-CoV-2","CAATAGTGAAACCGGA",10,31.28,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N24G L57S A81L K132L T170R",5
"lib2","SARS-CoV-2","CAATAGTGACTGCCCG",2,36.73,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y175P S184P S200H",3
"lib2","SARS-CoV-2","CAATAGTGCTTAGTCG",7,73.72,8.03,-2.8,0.1,2.47,1.15,0,">1 nonsynonymous","Y119S N157S",2
"lib2","SARS-CoV-2","CAATAGTTATCTTGCA",3,14.87,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","Q84W K94E S108F I138E Y143R G166S K198V",7
"lib2","SARS-CoV-2","CAATAGTTCATTAGTT",3,33.56,6,-4.84,2,3,1.09,0,">1 nonsynonymous","K48Y N58G F99R",3
"lib2","SARS-CoV-2","CAATATAAAAAAAAGA",17,58.73,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K87V N92S C158S",3
"lib2","SARS-CoV-2","CAATATAAATTCGGGG",10,97.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55P V71L A105L D112S G172W G174V",6
"lib2","SARS-CoV-2","CAATATAACAGATTCT",2,6.33,NA,NA,NA,NA,NA,NA,"stop","E10* Y39M S200H",3
"lib2","SARS-CoV-2","CAATATAAGTGAATGA",1,11.79,10.57,-0.27,0.17,2.88,1,0.01,"1 nonsynonymous","P169N",1
"lib2","SARS-CoV-2","CAATATAATGCATTTA",1,17.34,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","G9K Y21N R78L S129E Q168P",5
"lib2","SARS-CoV-2","CAATATACATGGTAAT",4,48.18,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","R27L K56Y G83S L95K W106S G155T",6
"lib2","SARS-CoV-2","CAATATACCTCTTACA",13,166.38,10.18,-0.65,0.05,2.74,1.01,0,">1 nonsynonymous","F62G T140I",2
"lib2","SARS-CoV-2","CAATATACGATCAGGA",8,61.88,8.59,-2.25,0.18,1.5,1.02,0.01,">1 nonsynonymous","K56I V77K",2
"lib2","SARS-CoV-2","CAATATACGCCTCCAA",5,70.68,10.37,-0.47,0.06,2.91,1.02,0,">1 nonsynonymous","T15N R27S",2
"lib2","SARS-CoV-2","CAATATACGGTCGTAG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","G155I A190*",2
"lib2","SARS-CoV-2","CAATATACTATTGTAA",3,14.43,10.94,0.1,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATATACTCCTTGAG",3,55.41,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I72T A105N",2
"lib2","SARS-CoV-2","CAATATACTTTCATAA",11,254.12,9.68,-1.16,0.06,2.42,1.04,0,">1 nonsynonymous","K26V F44C D98G",3
"lib2","SARS-CoV-2","CAATATAGACGTCATA",3,71.42,9.06,-1.77,0.07,2.79,1.07,0,">1 nonsynonymous","D59V Y119V",2
"lib2","SARS-CoV-2","CAATATAGGACGACTT",3,108.45,8.35,-2.48,0.13,2.8,1.1,0.01,">1 nonsynonymous","Y175M K199P",2
"lib2","SARS-CoV-2","CAATATAGGCCCACGT",7,51.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F12S A105F",2
"lib2","SARS-CoV-2","CAATATATGCTTCATG",4,16.75,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","N4M T15P L60R L95H",4
"lib2","SARS-CoV-2","CAATATATGTAGCAGG",4,36.9,9.36,-1.48,0.07,2.98,1.06,0,">1 nonsynonymous","Y39V S147F T170E T201K",4
"lib2","SARS-CoV-2","CAATATATGTCAGACT",3,76.9,10.84,0,0.07,2.89,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATATATTCGTCAAT",6,119.4,10.85,0.01,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATATATTTAGTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5P T85* S129V P149T",4
"lib2","SARS-CoV-2","CAATATCAATGATGAA",4,53.63,9.18,-1.65,0.08,1.94,1.12,0,">1 nonsynonymous","C31K T85I N120V T201K",4
"lib2","SARS-CoV-2","CAATATCATCGGGTGC",2,62,10.91,0.07,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATATCATGCGTTCC",5,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y V65P L95I",3
"lib2","SARS-CoV-2","CAATATCCTAAGATGG",7,50.06,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5V R16L A22T G86H S113D E135R",6
"lib2","SARS-CoV-2","CAATATCCTTCACCGA",1,0.95,NA,NA,NA,NA,NA,NA,"stop","I28V A33I T55* G86R L188P",5
"lib2","SARS-CoV-2","CAATATCGAAACTGAA",4,42.69,8.81,-2.02,0.21,1.5,1.06,0.02,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","CAATATCGAACATTCG",2,31.64,10.87,0.03,0.06,2.93,1.07,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","CAATATCGAGTGGTAG",7,57.83,10.64,-0.2,0.08,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATATCGATAAACTT",4,167.83,10.32,-0.52,0.03,2.95,1.02,0,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","CAATATCGTCCCCACG",4,41.22,10.54,-0.3,0.07,2.93,1.08,0,">1 nonsynonymous","A33M F44Y",2
"lib2","SARS-CoV-2","CAATATCTCGTCTTTA",5,53.42,10.1,-0.73,0.1,2.55,1.11,0,">1 nonsynonymous","A22V F160C",2
"lib2","SARS-CoV-2","CAATATGAAATCAGAA",9,87.48,10.85,0.01,0.07,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATATGAACATTTAA",23,4.95,NA,NA,NA,NA,NA,NA,"stop","F12I D90L Q168*",3
"lib2","SARS-CoV-2","CAATATGACAAATCCT",6,0.14,NA,NA,NA,NA,NA,NA,"stop","Y119* F156R F167T",3
"lib2","SARS-CoV-2","CAATATGCGACCTCAA",6,35.78,6,-4.84,2,3,1.21,0,">1 nonsynonymous","S45P K56S I88S P169V",4
"lib2","SARS-CoV-2","CAATATGCTCCCTAAA",2,21.42,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V77D",1
"lib2","SARS-CoV-2","CAATATGCTTATATTC",8,79.16,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4V C61P P96Y L122S",4
"lib2","SARS-CoV-2","CAATATGTAGACTCCG",4,35.35,8.64,-2.2,0.16,1.5,1.06,0.01,">1 nonsynonymous","N58L N107M",2
"lib2","SARS-CoV-2","CAATATGTCGAAGAGT",17,117.15,10.65,-0.19,0.04,2.93,1.04,0,">1 nonsynonymous","E10K R16H P54H",3
"lib2","SARS-CoV-2","CAATATGTTCAAATCG",10,40.79,9.01,-1.83,0.18,1.7,1.08,0.02,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","CAATATTATCGACATT",1,10.55,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","D59L P82L",2
"lib2","SARS-CoV-2","CAATATTCAGAAAGTA",4,10.62,8.01,-2.83,0.36,1.5,1.04,0.06,">1 nonsynonymous","A22W A42T N92G G101S A105P",5
"lib2","SARS-CoV-2","CAATATTCCCCCCTTC",5,48.21,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13I Y93L Y119L I138R",4
"lib2","SARS-CoV-2","CAATATTGATTCCACC",3,27.2,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I28R P82R I104N S139I",4
"lib2","SARS-CoV-2","CAATATTGCCAATTCA",6,24.92,6,-4.84,2,3,1.22,0,">1 nonsynonymous","A81V L95D",2
"lib2","SARS-CoV-2","CAATATTTAAGAGAAT",4,17.8,10.35,-0.49,0.14,2.41,1.02,0.01,">1 nonsynonymous","V71L V77L Q163L",3
"lib2","SARS-CoV-2","CAATATTTATCTCTCT",1,47.87,10.74,-0.1,0.07,2.93,1.09,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","CAATATTTCCGCAATT",19,741.7,10.84,0,0.04,2.91,1.1,0,"1 nonsynonymous","K56E",1
"lib2","SARS-CoV-2","CAATATTTGTAGCAAA",5,0.4,NA,NA,NA,NA,NA,NA,"stop","L5D D34* G116P",3
"lib2","SARS-CoV-2","CAATATTTTGATTAAG",8,0.52,NA,NA,NA,NA,NA,NA,"stop","C6L S41L F134S C158*",4
"lib2","SARS-CoV-2","CAATATTTTTGGAACT",1,5.25,NA,NA,NA,NA,NA,NA,"stop","V37I S43T P54* T63V D97N S129K G155S",7
"lib2","SARS-CoV-2","CAATCAAAAAACGCCG",7,98.72,9.59,-1.25,0.07,2.51,1.07,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","CAATCAAAAAAGTTTA",2,73.68,10.47,-0.36,0.04,2.99,1.01,0,">1 nonsynonymous","A89S N120V S129T",3
"lib2","SARS-CoV-2","CAATCAAAAAGCATAA",15,1.8,NA,NA,NA,NA,NA,NA,"stop","S53I Q84V W106F Q176* A190S",5
"lib2","SARS-CoV-2","CAATCAAAAATCAAAC",2,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D I104M",2
"lib2","SARS-CoV-2","CAATCAAAAGCACATT",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38G C61V K94D N130T E154I",5
"lib2","SARS-CoV-2","CAATCAAAAGGCGCGC",8,69.13,6.88,-3.96,0.37,1.5,1.17,0.03,">1 nonsynonymous","G9L R16S N151L Y178R",4
"lib2","SARS-CoV-2","CAATCAAAATATTTTA",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P161N Q163H F167L",3
"lib2","SARS-CoV-2","CAATCAAAATGTCACA",7,58.14,8.35,-2.49,0.14,1.5,1.08,0.01,"1 nonsynonymous","R127E",1
"lib2","SARS-CoV-2","CAATCAAACCGGCCCA",5,13.84,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N1S F8S G51S L60E Y121L R127A F160H",7
"lib2","SARS-CoV-2","CAATCAAACTTTTATA",3,6.97,9.71,-1.13,0.13,2.94,1,0.01,">1 nonsynonymous","S36N N58A G116V L122Y S129C",5
"lib2","SARS-CoV-2","CAATCAAAGCATCACG",1,25.57,9.31,-1.52,0.05,2.86,1.08,0,">1 nonsynonymous","K26M A145L",2
"lib2","SARS-CoV-2","CAATCAAAGTGATATT",2,0.08,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib2","SARS-CoV-2","CAATCAAATGATGTAT",15,111.61,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T15Q N107S P133L F156T F167K",5
"lib2","SARS-CoV-2","CAATCAAATGGAATAT",8,137.24,10.12,-0.72,0.06,2.43,1,0,">1 nonsynonymous","D98Y E135S",2
"lib2","SARS-CoV-2","CAATCAACAGGAATCA",8,80.68,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A22L L60A E76S K87M D98A Q176E",6
"lib2","SARS-CoV-2","CAATCAACCCAAGCCT",3,60.68,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V11G G146C F160I",3
"lib2","SARS-CoV-2","CAATCAAGAATCTACG",8,2.46,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","CAATCAAGACTTTTAA",8,2.06,NA,NA,NA,NA,NA,NA,"stop","N92R Q176*",2
"lib2","SARS-CoV-2","CAATCAAGTCCGAAGT",6,186.92,10.69,-0.15,0.02,2.93,1.07,0,">1 nonsynonymous","T63N Y121H",2
"lib2","SARS-CoV-2","CAATCAATACAGGACA",6,53.56,10.15,-0.69,0.04,2.9,1.08,0,">1 nonsynonymous","Y143M Q163R",2
"lib2","SARS-CoV-2","CAATCAATCTAAAATA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","Y39R G74Q Y93F Y121* C150D Q168T",6
"lib2","SARS-CoV-2","CAATCAATGCTAACCC",13,164.48,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","F44T Y165S",2
"lib2","SARS-CoV-2","CAATCAATTATTTTAT",2,6.18,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y21L A105D",2
"lib2","SARS-CoV-2","CAATCACATTCTTTAA",3,96.78,10.66,-0.18,0.03,2.98,1.02,0,">1 nonsynonymous","S41I C61T L122V",3
"lib2","SARS-CoV-2","CAATCACCAATTAATA",2,9.98,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","F62Q I104M F167V",3
"lib2","SARS-CoV-2","CAATCACCACCGCATA",4,200.83,10.8,-0.04,0.04,2.96,1.05,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","CAATCACCTACATGGG",9,76.96,8.98,-1.86,0.1,1.5,1.03,0,">1 nonsynonymous","R16T N24K S69W S139C P149L",5
"lib2","SARS-CoV-2","CAATCAGACATAGAAC",2,8.38,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F70V F99S",2
"lib2","SARS-CoV-2","CAATCAGAGTGCTACG",4,47.12,9.92,-0.92,0.11,2.36,1.09,0,"1 nonsynonymous","P96E",1
"lib2","SARS-CoV-2","CAATCAGGATATCTAA",5,38.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35M F70P D112H P133T C195D",5
"lib2","SARS-CoV-2","CAATCAGTAACCTAAA",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E L95S G116M I142F",4
"lib2","SARS-CoV-2","CAATCATCACCTGTAA",8,129.25,10.52,-0.32,0.05,2.91,1.04,0,">1 nonsynonymous","N4L P149T",2
"lib2","SARS-CoV-2","CAATCATCAGTTGACA",7,12.76,6,-4.84,2,1.5,1.36,0.06,">1 nonsynonymous","A14S Y93M D98N W106S",4
"lib2","SARS-CoV-2","CAATCATCCTAAAGAA",24,406.07,10.38,-0.46,0.03,2.86,1.06,0,">1 nonsynonymous","N13F T201A",2
"lib2","SARS-CoV-2","CAATCATCGGAGCTCG",12,66.01,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","A42T L95G C102F N157I",4
"lib2","SARS-CoV-2","CAATCATGAAACAAGT",2,6.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K48Q A89V I104R I138W K198W",5
"lib2","SARS-CoV-2","CAATCATTAACCAAAG",4,71.95,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39K C61A N120T K132S V180D",5
"lib2","SARS-CoV-2","CAATCATTATCCCCAA",3,56.8,10.91,0.07,0.06,2.94,1.04,0,">1 nonsynonymous","T55K I142M",2
"lib2","SARS-CoV-2","CAATCATTCCTCTGGA",5,38.62,10.93,0.09,0.08,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCATTCCTGTTGT",3,22.82,9.14,-1.7,0.15,1.66,1.09,0.01,">1 nonsynonymous","S45C G51K D97F P149H",4
"lib2","SARS-CoV-2","CAATCCAAAAAAATTA",6,93.89,8.85,-1.99,0.1,2.12,1.11,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","CAATCCAAAACTTAAA",4,5073.17,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","P7T T55S S113P S139V",4
"lib2","SARS-CoV-2","CAATCCAAAGTATCCG",6,0.74,NA,NA,NA,NA,NA,NA,"stop","S19Y L60P G146A C158*",4
"lib2","SARS-CoV-2","CAATCCAATAACATTC",2,10.85,10.23,-0.6,0.09,2.87,1.1,0.01,">1 nonsynonymous","N40M T100S",2
"lib2","SARS-CoV-2","CAATCCACATTCAGCT",18,1.64,NA,NA,NA,NA,NA,NA,"stop","S41* N58D A81C S108Y L131K T140Q F185C",7
"lib2","SARS-CoV-2","CAATCCACGCAGATAT",6,94.33,10.64,-0.19,0.04,2.94,1.06,0,">1 nonsynonymous","K132L T140C",2
"lib2","SARS-CoV-2","CAATCCACTACACCCT",1,8.9,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","K26V S69H D90L D97H I142H Y159S",6
"lib2","SARS-CoV-2","CAATCCAGTGCTATTA",5,55.29,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5V Y50L S113M R136S",4
"lib2","SARS-CoV-2","CAATCCATCATTGAAT",6,91.5,10.82,-0.02,0.03,3,1.01,0,">1 nonsynonymous","T85R H189Y",2
"lib2","SARS-CoV-2","CAATCCCACGTTGCAA",3,72.52,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L5G F17L K94C T100A V181A",5
"lib2","SARS-CoV-2","CAATCCCAGCTGAAAT",1,11.21,10.01,-0.82,0.13,2.82,1.07,0.01,">1 nonsynonymous","A14G V37Q C61I H189V",4
"lib2","SARS-CoV-2","CAATCCCAGTCACGAA",2,5.86,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V65L I80P A81T",3
"lib2","SARS-CoV-2","CAATCCCATGCAAGAG",1,30.23,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Q84K G172P L188H",3
"lib2","SARS-CoV-2","CAATCCCATTGTACGG",11,128.13,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F44L C61Q K94T",3
"lib2","SARS-CoV-2","CAATCCCCAGTATGAG",18,9.21,NA,NA,NA,NA,NA,NA,"stop","C31P C49* L122* R136W",4
"lib2","SARS-CoV-2","CAATCCCGAAAGATCT",10,137.42,10.59,-0.24,0.02,2.99,1.01,0,">1 nonsynonymous","F62C G155S L188A",3
"lib2","SARS-CoV-2","CAATCCCGATTCACAC",10,76.01,8.02,-2.81,0.17,1.84,1.12,0.01,">1 nonsynonymous","D59E N120P V181L",3
"lib2","SARS-CoV-2","CAATCCCGCAGCTAGA",9,92.61,6.1,-4.74,1.06,1.5,1.2,0.03,">1 nonsynonymous","F12G W23R P96M",3
"lib2","SARS-CoV-2","CAATCCCGGACAGACA",4,23.81,9.25,-1.59,0.11,2.57,1.06,0.01,">1 nonsynonymous","G9I S29T K87G T100H T201V",5
"lib2","SARS-CoV-2","CAATCCCTAAACGGTA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib2","SARS-CoV-2","CAATCCCTACGCCAAT",18,151.39,6,-4.84,2,3,1.2,0,">1 nonsynonymous","A14P V37T T63Y V77D G86E G155A",6
"lib2","SARS-CoV-2","CAATCCCTGACGTAAT",4,49.16,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F47I G86Q T100P I138L Q176M T201S",6
"lib2","SARS-CoV-2","CAATCCCTTTACACGT",11,24.04,7.53,-3.3,0.32,1.5,1.07,0.07,">1 nonsynonymous","T3N S45G D90V I104M C158L P197G",6
"lib2","SARS-CoV-2","CAATCCGCGGCGGTTT",10,64.33,7.12,-3.72,0.33,1.5,1.11,0.03,">1 nonsynonymous","K56S R124T",2
"lib2","SARS-CoV-2","CAATCCGGAAAGGCTG",2,18.77,10.82,-0.02,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCCTAATTTTAGG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","A89N W106*",2
"lib2","SARS-CoV-2","CAATCCTATGCCCTTA",8,133.62,10.43,-0.4,0.04,2.9,1.05,0,">1 nonsynonymous","F62D T201A",2
"lib2","SARS-CoV-2","CAATCCTATTTCAATC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","G9W S19* N107L",3
"lib2","SARS-CoV-2","CAATCCTATTTGAGAG",11,6.22,NA,NA,NA,NA,NA,NA,"stop","T15R G83V T100C I104P N110R R179*",6
"lib2","SARS-CoV-2","CAATCCTCACCCCATA",3,68.84,10.88,0.05,0.07,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATCCTCTAAGGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* E10V S19K F62Y P96T G152I",6
"lib2","SARS-CoV-2","CAATCCTCTAATAGAA",2,29.57,9.77,-1.07,0.1,2.74,1.12,0,">1 nonsynonymous","I104M I142Y S147N G155L",4
"lib2","SARS-CoV-2","CAATCCTTAAATAAGC",4,61.2,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y39G G83M P149V Q168V V173S S184F",6
"lib2","SARS-CoV-2","CAATCGAAATAACTAG",1,4.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92K",1
"lib2","SARS-CoV-2","CAATCGAAATGATTTA",1,2.15,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAATCGAACTCACGCG",2,42.47,9.53,-1.3,0.07,2.88,1.13,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","CAATCGAATAGGGATG",4,92.46,10.14,-0.69,0.05,2.76,1.05,0,">1 nonsynonymous","N40V C61S",2
"lib2","SARS-CoV-2","CAATCGAATTAAACAG",2,16.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16N A22I F99L C150L",4
"lib2","SARS-CoV-2","CAATCGAGGTTGAATT",7,3.62,NA,NA,NA,NA,NA,NA,"stop","T55S N64L N92* V103A A105R L125T",6
"lib2","SARS-CoV-2","CAATCGCAATAGAAAA",2,13.03,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","A14W Y21W G101L N157A",4
"lib2","SARS-CoV-2","CAATCGCTTTTCGGTC",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V A33H F47N P82T V173P V182M",6
"lib2","SARS-CoV-2","CAATCGGCACTAAAGC",9,164.62,9.66,-1.18,0.04,2.81,1.07,0,">1 nonsynonymous","T55R Y165M",2
"lib2","SARS-CoV-2","CAATCGGCAGGAAGAA",3,15.34,8.79,-2.04,0.22,1.5,1.16,0.02,">1 nonsynonymous","Y39D Q84L F134H P149L",4
"lib2","SARS-CoV-2","CAATCGGCTGCATATG",12,164.86,9.41,-1.42,0.08,1.77,1.11,0,">1 nonsynonymous","S19A D97P F134A",3
"lib2","SARS-CoV-2","CAATCGGGCCAGTGCC",2,37.05,9.42,-1.42,0.24,1.5,1,0.03,">1 nonsynonymous","A81V Q144Y",2
"lib2","SARS-CoV-2","CAATCGGGTTGCATTA",2,25.82,8.99,-1.84,0.07,2.37,1.04,0,">1 nonsynonymous","N4V L111S L122N",3
"lib2","SARS-CoV-2","CAATCGTAAATTGAAA",1,45.13,10.81,-0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCGTAAGGCATGA",6,299.06,10.13,-0.71,0.04,2.72,1.01,0,">1 nonsynonymous","S45R C61G",2
"lib2","SARS-CoV-2","CAATCGTACCACACAA",10,73.25,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K94A Y165P",2
"lib2","SARS-CoV-2","CAATCGTAGTATGTAT",11,214.32,10.68,-0.15,0.04,2.82,1.1,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","CAATCGTCACCATTTT",9,101.1,6.91,-3.92,0.26,1.59,1.14,0.01,">1 nonsynonymous","A105L Y119S",2
"lib2","SARS-CoV-2","CAATCGTGACCTTACA",1,50.53,7.56,-3.28,0.24,2,1.12,0.02,"1 nonsynonymous","C158N",1
"lib2","SARS-CoV-2","CAATCGTTATATAAAG",3,43.51,10.88,0.04,0.08,2.9,1.07,0,">1 nonsynonymous","E10L L60Q P197Y",3
"lib2","SARS-CoV-2","CAATCTAAAACAGAAG",14,76.81,9.93,-0.9,0.07,2.42,1.03,0,">1 nonsynonymous","N1I A22R G152L T201M",4
"lib2","SARS-CoV-2","CAATCTAAATTAAAAA",6,0.03,NA,NA,NA,NA,NA,NA,"stop","F12W D68* T140S P169D",4
"lib2","SARS-CoV-2","CAATCTAACATCTTGT",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T P96M K132Y",3
"lib2","SARS-CoV-2","CAATCTAAGACATCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","L95Q F134M Y143*",3
"lib2","SARS-CoV-2","CAATCTAAGGCACCTC",2,29.9,10.65,-0.19,0.05,2.9,1.12,0,">1 nonsynonymous","Q84C N120K",2
"lib2","SARS-CoV-2","CAATCTAATCAACATT",20,53.86,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L57M V181K",2
"lib2","SARS-CoV-2","CAATCTAATTATAAGC",4,13.4,6.63,-4.21,0.34,3,1.13,0.01,">1 nonsynonymous","P54W L95R L187Y",3
"lib2","SARS-CoV-2","CAATCTACGATTCTTG",2,7.47,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I88E L95Y C102P T201R",4
"lib2","SARS-CoV-2","CAATCTACTGTCCGTA",7,75.2,9.61,-1.23,0.07,2.81,1.08,0,">1 nonsynonymous","Y39K C61A T170Y",3
"lib2","SARS-CoV-2","CAATCTAGAAAATACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A33S K87* L183V",3
"lib2","SARS-CoV-2","CAATCTAGGCACCAGT",8,37.52,10.64,-0.2,0.06,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCTAGGTCTTAGA",5,8.2,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","K26P C49W G74S G116L Y121L",5
"lib2","SARS-CoV-2","CAATCTATAACAGCAT",6,94.76,10.86,0.03,0.07,2.76,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCTATAGGGAGGG",7,49.77,10.8,-0.03,0.04,2.96,1.03,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","CAATCTATATCAAGGA",4,93.14,9.29,-1.54,0.02,2.95,1.06,0,">1 nonsynonymous","A105T Y119F",2
"lib2","SARS-CoV-2","CAATCTATCGTTGTTA",1,0.67,NA,NA,NA,NA,NA,NA,"stop","I2H Y123I K128M Y143* C158V",5
"lib2","SARS-CoV-2","CAATCTCAAGCGGCTT",4,40.92,10.04,-0.8,0.06,2.93,1.03,0,"1 nonsynonymous","N118T",1
"lib2","SARS-CoV-2","CAATCTCAATAAAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K R73V T100I A145D",4
"lib2","SARS-CoV-2","CAATCTCAATAGCATA",1,73.49,10.49,-0.34,0.02,2.97,1.03,0,"1 nonsynonymous","D34E",1
"lib2","SARS-CoV-2","CAATCTCCTGACCCGT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","D59* N107Y Y143H V153G",4
"lib2","SARS-CoV-2","CAATCTCGCAAGACAT",7,48.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R73E P96N G101M",3
"lib2","SARS-CoV-2","CAATCTCTGGTCAATT",1,12.88,6.13,-4.71,1.45,1.5,1.03,0.01,">1 nonsynonymous","C6P S19V P54W A105L",4
"lib2","SARS-CoV-2","CAATCTGAAAAATAGT",4,245.5,10.39,-0.45,0.05,2.92,1.09,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CAATCTGAATCATTTT",1,28.65,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19L V52F R124S G166F",4
"lib2","SARS-CoV-2","CAATCTGAGAAAAACG",2,90.08,10.25,-0.59,0.04,2.87,1.01,0,">1 nonsynonymous","G9L S43D F134N",3
"lib2","SARS-CoV-2","CAATCTGATAACACCA",6,199.24,10.59,-0.25,0.05,2.82,1.08,0,">1 nonsynonymous","S36Y H189N",2
"lib2","SARS-CoV-2","CAATCTGCACTGATAA",16,61.47,10.62,-0.21,0.03,2.98,1.02,0,"1 nonsynonymous","T85D",1
"lib2","SARS-CoV-2","CAATCTGCCCTGTCAC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","T55* Q84L G166V",3
"lib2","SARS-CoV-2","CAATCTGGAAAATTCG",4,71.57,6.44,-4.4,0.5,1.5,1.19,0.02,">1 nonsynonymous","V37G K48R A89T A105L Q163A",5
"lib2","SARS-CoV-2","CAATCTTAATTTATTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A14P G101S E135M",4
"lib2","SARS-CoV-2","CAATCTTACTCTTGCA",1,8.07,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50C P149H",2
"lib2","SARS-CoV-2","CAATCTTAGGCTTTCC",2,2.11,NA,NA,NA,NA,NA,NA,"stop","N157F T170*",2
"lib2","SARS-CoV-2","CAATCTTATAAGTACG",5,2.86,NA,NA,NA,NA,NA,NA,"stop","Y50N T63R K132* G152S Q168H G174F",6
"lib2","SARS-CoV-2","CAATCTTCATTCATGA",2,33.25,10.73,-0.11,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATCTTGACTAACTT",15,103.81,9.51,-1.32,0.09,1.84,1.04,0,">1 nonsynonymous","A89S A105I",2
"lib2","SARS-CoV-2","CAATCTTGTTACTTAC",1,8.54,10.55,-0.28,0.13,2.91,1.13,0,">1 nonsynonymous","T55S E135S P197E",3
"lib2","SARS-CoV-2","CAATCTTTCGTCCCCT",2,7.91,NA,NA,NA,NA,NA,NA,"stop","T46I I88G K94* Y165K T201L",5
"lib2","SARS-CoV-2","CAATGAAAAAAACTGA",4,47.91,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V77E R127W",2
"lib2","SARS-CoV-2","CAATGAAAACAACCAG",11,69.27,7.48,-3.36,0.09,2.16,1.09,0,">1 nonsynonymous","L111D G172A",2
"lib2","SARS-CoV-2","CAATGAAAACAACTGA",8,204.21,10.73,-0.11,0.03,2.96,1.05,0,">1 nonsynonymous","G9V R27K",2
"lib2","SARS-CoV-2","CAATGAAAATTTCCAA",12,126.94,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N13V F167A Y178K",3
"lib2","SARS-CoV-2","CAATGAAACCGATTAG",2,14.73,6.57,-4.27,0.32,1.5,1.05,0.01,">1 nonsynonymous","W23T N151C E186G",3
"lib2","SARS-CoV-2","CAATGAAATAAGACCG",2,74.35,10.87,0.03,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATGAAATTAATGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","R25* Y91C",2
"lib2","SARS-CoV-2","CAATGAACAGATTAGA",1,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R L183N P197Q",3
"lib2","SARS-CoV-2","CAATGAACATACCGAT",9,153.21,7.63,-3.21,0.1,1.5,1.11,0,">1 nonsynonymous","G9I Y39L D59C N120S F126S",5
"lib2","SARS-CoV-2","CAATGAACATGAACGC",4,2.31,NA,NA,NA,NA,NA,NA,"stop","N1A N58F E76I R127H G152V P161L T201*",7
"lib2","SARS-CoV-2","CAATGAACATTACCCA",10,115.53,9.47,-1.36,0.07,1.97,1.06,0,">1 nonsynonymous","A14L D98M",2
"lib2","SARS-CoV-2","CAATGAACATTTAAAG",5,121.36,10.71,-0.13,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATGAACTAGTTAAT",6,199.34,10.4,-0.44,0.04,2.96,1.06,0,">1 nonsynonymous","V37W F44V Y121L",3
"lib2","SARS-CoV-2","CAATGAAGGACCTGAG",7,0.05,NA,NA,NA,NA,NA,NA,"stop","Y66T N120F Y123* C150S",4
"lib2","SARS-CoV-2","CAATGAAGTTCTCTCC",2,0.39,NA,NA,NA,NA,NA,NA,"stop","T46M S139C C195*",3
"lib2","SARS-CoV-2","CAATGAATATACCTAT",4,48.94,10.76,-0.07,0.03,2.92,1.07,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","CAATGAATCATGTAAG",4,0.78,NA,NA,NA,NA,NA,NA,"stop","T55D I88N Y91I K114* G166T",5
"lib2","SARS-CoV-2","CAATGAATTACCTTAC",5,151.64,10.52,-0.32,0.04,2.9,1.09,0,">1 nonsynonymous","N58I T201N",2
"lib2","SARS-CoV-2","CAATGAATTATTACCG",1,140.96,10.85,0.01,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATGACAATTCTCCG",9,1.41,NA,NA,NA,NA,NA,NA,"stop","Y21* I28M Y66G F99C A145*",5
"lib2","SARS-CoV-2","CAATGACACACTGAGA",1,9.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K56A R73L R127Y Y175G",4
"lib2","SARS-CoV-2","CAATGACATAAGAATG",13,7.23,NA,NA,NA,NA,NA,NA,"stop","L5T T55L Q84* C102G",4
"lib2","SARS-CoV-2","CAATGACCCAAAGCTT",5,2.08,NA,NA,NA,NA,NA,NA,"stop","G9S Y50* D112S F134C A192V",5
"lib2","SARS-CoV-2","CAATGACCTCCAAGTG",6,35.16,10.86,0.02,0.07,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATGACCTTATTATG",3,45.79,8.31,-2.52,0.14,1.76,1.09,0.01,">1 nonsynonymous","Y39T N64H S113P L188F",4
"lib2","SARS-CoV-2","CAATGACGACGATACT",1,8.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19L N58A",2
"lib2","SARS-CoV-2","CAATGACTCAACTTGC",5,113.35,8.45,-2.39,0.12,2.07,1.09,0.01,">1 nonsynonymous","P149Y F167W",2
"lib2","SARS-CoV-2","CAATGAGGTATAACAT",1,26.29,9.79,-1.05,0.11,2.42,1.12,0.01,">1 nonsynonymous","G9L D90F",2
"lib2","SARS-CoV-2","CAATGAGTTGGCGCTA",2,15,10.14,-0.69,0.09,2.87,1.01,0,">1 nonsynonymous","T100D S164P",2
"lib2","SARS-CoV-2","CAATGATATTCTTTTA",12,5.39,NA,NA,NA,NA,NA,NA,"stop","K87* T148E",2
"lib2","SARS-CoV-2","CAATGATCCTACTACA",10,8.02,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9F N13S A42W T46K K56N G83L G86A N109L",8
"lib2","SARS-CoV-2","CAATGATGAAAACGGC",1,29.86,8.76,-2.08,0.08,2.91,1.14,0,"1 nonsynonymous","L125R",1
"lib2","SARS-CoV-2","CAATGATGGTAAATGA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G C61L S113Y V173P",4
"lib2","SARS-CoV-2","CAATGATTGAAATGGG",1,10.77,10.73,-0.1,0.02,3,1,0,">1 nonsynonymous","S19N L60M",2
"lib2","SARS-CoV-2","CAATGATTTCCTAATA",12,60.82,6.12,-4.71,1.03,1.5,1.24,0.03,">1 nonsynonymous","N64C F99I Y121S G152I Q168A L188T S200P",7
"lib2","SARS-CoV-2","CAATGATTTTCCTATA",12,82.52,9.48,-1.36,0.05,1.72,1.09,0,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","CAATGCAAACCTAGCC",2,29.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V77S G86V",2
"lib2","SARS-CoV-2","CAATGCAACAAGTACC",4,29.02,10.62,-0.22,0.07,2.99,1.07,0,">1 nonsynonymous","T100I Q144D",2
"lib2","SARS-CoV-2","CAATGCAACGACAGAT",4,165.04,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D68L Y91L N110P D137E Q176D",5
"lib2","SARS-CoV-2","CAATGCACGCACCGAT",6,15.03,6.71,-4.12,0.64,1.5,1.08,0.06,">1 nonsynonymous","N1Y C49R I142P G166L",4
"lib2","SARS-CoV-2","CAATGCAGACAGCAGG",1,8.93,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","P7A Y50T P82C R124Y",4
"lib2","SARS-CoV-2","CAATGCAGCTAGTTGT",14,224.36,10.71,-0.12,0.03,2.95,1.04,0,">1 nonsynonymous","K128L I138T",2
"lib2","SARS-CoV-2","CAATGCATGCTATAAA",6,45,10.11,-0.72,0.14,2.44,1.02,0.01,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","CAATGCATTCCTACGC",4,65.43,10.12,-0.72,0.07,2.31,1.05,0,">1 nonsynonymous","N4F D98Y",2
"lib2","SARS-CoV-2","CAATGCCAACTGTAGA",1,16.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19G G51H A67R V71C G174Q F185Y",6
"lib2","SARS-CoV-2","CAATGCCCACCGCGAA",7,64.19,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S69L P96M G155S Y175C",4
"lib2","SARS-CoV-2","CAATGCCCGTTCTCAT",1,0.56,NA,NA,NA,NA,NA,NA,"stop","K26S C61G Y91D I138R C158W Y175*",6
"lib2","SARS-CoV-2","CAATGCCGAAGGATAA",2,4.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","CAATGCCTCTAATATC",7,11.16,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","G51R K87G L95P W106R L131R E141G",6
"lib2","SARS-CoV-2","CAATGCGAAAGTTATA",5,1.94,NA,NA,NA,NA,NA,NA,"stop","Y50G G83S L122* Q144D",4
"lib2","SARS-CoV-2","CAATGCGAACCAAACT",6,0.43,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib2","SARS-CoV-2","CAATGCGACGAAACTA",2,48.06,10.7,-0.14,0.04,2.96,1.04,0,">1 nonsynonymous","D59M T201W",2
"lib2","SARS-CoV-2","CAATGCGACTCCGAAA",6,79.91,9.5,-1.34,0.06,2.91,1.11,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","CAATGCGATAACACCC",2,46.65,10.78,-0.05,0.03,2.93,1.08,0,">1 nonsynonymous","S29A N130S",2
"lib2","SARS-CoV-2","CAATGCGATCACGGTA",1,29.22,9.74,-1.1,0.15,2.54,1.21,0.01,">1 nonsynonymous","E141V G152C",2
"lib2","SARS-CoV-2","CAATGCGATTGACAAA",4,27.43,9.47,-1.36,0.18,1.77,1.11,0.02,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","CAATGCGGGACTAAGA",9,70.88,6,-4.84,2,3,1.22,0,">1 nonsynonymous","N30R I88E P161L",3
"lib2","SARS-CoV-2","CAATGCTCCTAACGAC",1,9.03,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","T55S T85M L95G A105L",4
"lib2","SARS-CoV-2","CAATGCTTGCGATGAA",1,16.38,9.03,-1.81,0.12,1.76,1.1,0.01,">1 nonsynonymous","I2H P82R",2
"lib2","SARS-CoV-2","CAATGGAACTAATAAC",2,13.39,8.98,-1.85,0.06,2.96,1,0,">1 nonsynonymous","D97L L125T F134A P149L T201R",5
"lib2","SARS-CoV-2","CAATGGACAGTGAGTG",2,3.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","CAATGGACCCCCAACA",9,307.04,10.28,-0.56,0.02,2.89,1.05,0,">1 nonsynonymous","G51S K132L",2
"lib2","SARS-CoV-2","CAATGGACGATATGAG",2,61.82,7,-3.84,0.24,1.5,1.08,0.01,">1 nonsynonymous","V32H C150N",2
"lib2","SARS-CoV-2","CAATGGACGGTGGACG",3,48.01,10.81,-0.03,0.04,2.93,1.08,0,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","CAATGGAGCCTACCCA",1,3.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V65I",1
"lib2","SARS-CoV-2","CAATGGATCCATTGTA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","CAATGGATGGAAGTAT",5,21.27,6,-4.84,2,1.5,1.44,0.06,">1 nonsynonymous","T55Y D75L N92G L131I G152H",5
"lib2","SARS-CoV-2","CAATGGATTTAGCAAA",7,1.23,NA,NA,NA,NA,NA,NA,"stop","N4P V77I K94* L122T",4
"lib2","SARS-CoV-2","CAATGGCACAGAACTG",4,32.91,10.34,-0.5,0.08,2.81,1.18,0,"1 nonsynonymous","R27G",1
"lib2","SARS-CoV-2","CAATGGCACGAGGCAA",11,223.03,10.29,-0.55,0.06,2.7,1.13,0,">1 nonsynonymous","A33E Q163M",2
"lib2","SARS-CoV-2","CAATGGCATATGTGTT",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I S129P",2
"lib2","SARS-CoV-2","CAATGGCTAAACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19* C158G L188T",3
"lib2","SARS-CoV-2","CAATGGGCTTAACGTA",1,5.07,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","T55A Y93N C158V V180H",4
"lib2","SARS-CoV-2","CAATGGGGACAAGTAT",3,57.1,10.81,-0.03,0.05,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATGGGTAGACGGAT",3,17.84,10.64,-0.2,0.09,2.89,1.09,0,">1 nonsynonymous","Q84L A190G",2
"lib2","SARS-CoV-2","CAATGGTAGAGACTAA",3,51,8.74,-2.09,0.06,2.95,1.07,0,">1 nonsynonymous","T46D N157S",2
"lib2","SARS-CoV-2","CAATGGTAGCCGGCCC",1,98.99,10.21,-0.63,0.04,2.92,1.01,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","CAATGTAAAACCCATG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","K87D E135*",2
"lib2","SARS-CoV-2","CAATGTAACTATAGGC",8,163.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V77H Q176M L183M",3
"lib2","SARS-CoV-2","CAATGTAAGAAACCCG",6,24.9,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","P54M I72K V77E E141L",4
"lib2","SARS-CoV-2","CAATGTACATTCCCGT",3,49.22,10.32,-0.52,0.07,2.86,1.05,0,">1 nonsynonymous","F44L N151L",2
"lib2","SARS-CoV-2","CAATGTATAAAGCTGA",2,21.92,8.02,-2.82,0.23,1.63,1.09,0.02,">1 nonsynonymous","V115G Y165V",2
"lib2","SARS-CoV-2","CAATGTATAACGTAAA",11,27.68,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","L5V V77G I104S",3
"lib2","SARS-CoV-2","CAATGTATACAACGCC",3,72.17,10.56,-0.27,0.07,2.91,1.08,0,"1 nonsynonymous","D98M",1
"lib2","SARS-CoV-2","CAATGTATCGCGACTT",5,10.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D90C F99S V103G R136F",4
"lib2","SARS-CoV-2","CAATGTATGCAAGAAT",7,46.61,8.78,-2.06,0.13,2.61,1.12,0.01,">1 nonsynonymous","E10T V37Y N109D S164T P197A",5
"lib2","SARS-CoV-2","CAATGTCACAAACAAC",5,11.53,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","A33D P96L",2
"lib2","SARS-CoV-2","CAATGTCACTAGCATG",2,36.04,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","A33T G172W",2
"lib2","SARS-CoV-2","CAATGTCCATCTTACT",3,27.43,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Q84S A105T Y121L T140M C158R V180L",6
"lib2","SARS-CoV-2","CAATGTCGACACTACT",1,98.6,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S36L S113R L122P",3
"lib2","SARS-CoV-2","CAATGTCTACTCACAG",3,18.9,10.18,-0.66,0.1,2.85,1.06,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","CAATGTGAATAAAACA",1,7.2,9.66,-1.17,0.08,2.03,1,0,">1 nonsynonymous","L38S K132L",2
"lib2","SARS-CoV-2","CAATGTGACATACACT",14,6.97,NA,NA,NA,NA,NA,NA,"stop","T3P P96*",2
"lib2","SARS-CoV-2","CAATGTGAGGCACTGA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib2","SARS-CoV-2","CAATGTGATAGTAAAC",6,63.45,10.62,-0.22,0.04,2.9,1.08,0,">1 nonsynonymous","T3Y L60V L125I",3
"lib2","SARS-CoV-2","CAATGTGCAGCTCCAG",2,5.53,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","K94E N130P G146D",3
"lib2","SARS-CoV-2","CAATGTGTGTAAAGCA",1,20.26,9.95,-0.89,0.08,2.78,1.15,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","CAATGTTACATTTAGT",2,23.69,7.11,-3.72,0.3,1.5,1.04,0.03,">1 nonsynonymous","V65E I142N",2
"lib2","SARS-CoV-2","CAATGTTACTATGGGA",3,20.26,8.43,-2.41,0.28,1.5,1.12,0.03,">1 nonsynonymous","V11H Y39K G166L",3
"lib2","SARS-CoV-2","CAATGTTCATTGCACC",20,246.7,10.85,0.01,0.06,2.88,1.14,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","CAATGTTTAGTAATAT",2,6.84,10.41,-0.43,0.07,3,1.03,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","CAATGTTTCTATTGGG",14,177.51,10.16,-0.67,0.04,2.8,1.05,0,">1 nonsynonymous","A14I Q84K",2
"lib2","SARS-CoV-2","CAATGTTTGTGAAAAG",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N V103M A105K T148I",4
"lib2","SARS-CoV-2","CAATTAAAAATGAATG",2,0.65,NA,NA,NA,NA,NA,NA,"stop","C61S D97T Y121*",3
"lib2","SARS-CoV-2","CAATTAAACCTGACCG",21,57.32,9.49,-1.34,0.07,1.92,1.08,0,">1 nonsynonymous","A33M V103L",2
"lib2","SARS-CoV-2","CAATTAAACTATTATC",2,17.08,6.76,-4.07,0.48,1.5,1.26,0.03,">1 nonsynonymous","K56F F134C E141K P149K",4
"lib2","SARS-CoV-2","CAATTAAACTTACACA",3,8.31,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","D68C F99V N107T",3
"lib2","SARS-CoV-2","CAATTAAAGAAAAGAA",2,22.68,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F44T L95P T100P K114A",4
"lib2","SARS-CoV-2","CAATTAAAGTTGAGGC",3,8.14,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","W23K G74S T85Y Y119Q",4
"lib2","SARS-CoV-2","CAATTAAATAGCCGGG",14,70.39,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K48L R179Y",2
"lib2","SARS-CoV-2","CAATTAAATAGTTCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","A18R K48A T100* A105Y P149T",5
"lib2","SARS-CoV-2","CAATTAAATATAAATT",4,12.28,10.68,-0.15,0.07,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATTAAATATAACTT",7,18.72,8.89,-1.95,0.08,2.79,1.07,0,">1 nonsynonymous","T63A N118M P169T",3
"lib2","SARS-CoV-2","CAATTAAATGATAATT",5,95.5,9.1,-1.74,0.04,2.92,1.04,0,">1 nonsynonymous","S45D Y143K N171F",3
"lib2","SARS-CoV-2","CAATTAAATGTTGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13I S41Q K128S I142N G152* Y178H L188F",7
"lib2","SARS-CoV-2","CAATTAACAAAGGTAG",1,7.93,7.33,-3.5,0.71,1.5,1.18,0.05,">1 nonsynonymous","E10D G83W R179V",3
"lib2","SARS-CoV-2","CAATTAACACAACTAT",6,232.95,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G172V L188F",2
"lib2","SARS-CoV-2","CAATTAACCGTGTCAA",2,2.53,NA,NA,NA,NA,NA,NA,"stop","A14W D59* A105Y C150T",4
"lib2","SARS-CoV-2","CAATTAACCTAACATT",10,68.32,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G101P C150M",2
"lib2","SARS-CoV-2","CAATTAACTAGCGAGA",8,74.28,10.15,-0.69,0.03,2.76,1.04,0,">1 nonsynonymous","Q84F N151E",2
"lib2","SARS-CoV-2","CAATTAAGAATACACA",4,69.41,10.83,0,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATTAAGACATTAAA",6,54.95,6.17,-4.66,0.49,1.5,1.17,0.01,">1 nonsynonymous","K48T A105V D112I L122M C150I",5
"lib2","SARS-CoV-2","CAATTAAGACGTGATA",7,27.99,6.08,-4.76,1.47,1.5,1.34,0.04,">1 nonsynonymous","P82I L122M I142S T148L E154F Q168Y",6
"lib2","SARS-CoV-2","CAATTAAGATAGTAAC",1,14.04,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","Y35K P149K C158F S164F",4
"lib2","SARS-CoV-2","CAATTAAGCAGGAGAA",7,2.4,NA,NA,NA,NA,NA,NA,"stop","A14N P82M K87* K128S Y165E",5
"lib2","SARS-CoV-2","CAATTAAGGAGTCATT",2,25.21,10.84,0,0.06,2.97,1.05,0,"1 nonsynonymous","S36Q",1
"lib2","SARS-CoV-2","CAATTAAGGTTCAGAC",1,5.97,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","G86I A105M Y143L F185E",4
"lib2","SARS-CoV-2","CAATTAAGTAAGCTAA",4,11.03,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N107K F126A Q168M",3
"lib2","SARS-CoV-2","CAATTAAGTGGGATGC",12,116.23,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6K K87G F160T G166D",4
"lib2","SARS-CoV-2","CAATTAAGTTATATTA",2,34.66,9.4,-1.44,0.11,2.11,1,0.01,">1 nonsynonymous","F8T F44A",2
"lib2","SARS-CoV-2","CAATTAATAAGCATTG",4,1.15,NA,NA,NA,NA,NA,NA,"stop","L5F P7K T46* P54N D97S",5
"lib2","SARS-CoV-2","CAATTAATCTAACTCC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","E10* S19R Y35W I142S",4
"lib2","SARS-CoV-2","CAATTAATGAACCATA",5,74.49,10.3,-0.54,0.07,2.7,1.06,0,"1 nonsynonymous","N24L",1
"lib2","SARS-CoV-2","CAATTACAAAACGATC",7,3.21,NA,NA,NA,NA,NA,NA,"stop","S41N R136T Y175*",3
"lib2","SARS-CoV-2","CAATTACACTGATAAC",3,22.19,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V11N Y21A Y35H S45V Y93T",5
"lib2","SARS-CoV-2","CAATTACAGAACATAG",9,73.41,6,-4.84,2,1.5,1.33,0.02,">1 nonsynonymous","E10T N64T I104K W106C",4
"lib2","SARS-CoV-2","CAATTACAGATACATA",10,118.28,10.81,-0.03,0.05,2.92,1.1,0,"1 nonsynonymous","C61H",1
"lib2","SARS-CoV-2","CAATTACAGCAACTCA",5,25.59,10.41,-0.42,0.07,2.9,1.13,0,">1 nonsynonymous","V37K K114R G152T",3
"lib2","SARS-CoV-2","CAATTACATAAACAAA",6,26.43,6.14,-4.69,0.81,1.5,1.13,0.02,">1 nonsynonymous","W23R N64G Q144N",3
"lib2","SARS-CoV-2","CAATTACATATGCAGA",6,64.27,8.65,-2.19,0.07,2.94,1.02,0,">1 nonsynonymous","R73E T85R T201R",3
"lib2","SARS-CoV-2","CAATTACATGACCTGA",10,147.09,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K48Y D68L F99S C150Y",4
"lib2","SARS-CoV-2","CAATTACATGGGACTA",6,120.02,8.57,-2.27,0.07,2.71,1.06,0,">1 nonsynonymous","N4V A145T T170R",3
"lib2","SARS-CoV-2","CAATTACCCAGACGCT",5,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104Q P197S",2
"lib2","SARS-CoV-2","CAATTACCCATGCGAA",2,10.75,7.26,-3.58,0.35,1.5,1.07,0.02,">1 nonsynonymous","T140W V181E",2
"lib2","SARS-CoV-2","CAATTACCGAGTTGCT",1,23.07,10.83,-0.01,0.04,2.9,1.09,0,">1 nonsynonymous","N1P H189P T201D",3
"lib2","SARS-CoV-2","CAATTACCGTTTGCAC",4,97.96,10.33,-0.5,0.04,2.79,1.08,0,">1 nonsynonymous","A14T S147R",2
"lib2","SARS-CoV-2","CAATTACGAAAACGTG",3,0.74,NA,NA,NA,NA,NA,NA,"stop","A14V F70A A105Y I142*",4
"lib2","SARS-CoV-2","CAATTACGCCTGCCGC",3,13.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14L C150R",2
"lib2","SARS-CoV-2","CAATTACTACGCTACC",12,156.64,10.84,0,0.04,2.93,1.09,0,"1 nonsynonymous","R27T",1
"lib2","SARS-CoV-2","CAATTACTACTTTGAA",5,1.41,NA,NA,NA,NA,NA,NA,"stop","D34T T63D G74L S113* L122W S200*",6
"lib2","SARS-CoV-2","CAATTACTGAACAGTG",1,235.57,9.71,-1.13,0.07,2.5,1.03,0,">1 nonsynonymous","V37C G83N N107S F160R",4
"lib2","SARS-CoV-2","CAATTACTTTATGGTA",10,48.95,8.79,-2.05,0.12,1.67,1.13,0.01,">1 nonsynonymous","E10V A42Y G83I",3
"lib2","SARS-CoV-2","CAATTAGAAAAATTCT",5,35.23,9.41,-1.42,0.13,2.35,1.08,0.01,">1 nonsynonymous","K87M W106V K128S",3
"lib2","SARS-CoV-2","CAATTAGAAACCCCCT",2,62.74,10.81,-0.03,0.1,2.72,1.09,0,">1 nonsynonymous","I138L K199Q",2
"lib2","SARS-CoV-2","CAATTAGAATAACAAT",10,52.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5S L60T P96T E135G",4
"lib2","SARS-CoV-2","CAATTAGACACGATAA",11,244.88,7.99,-2.85,0.13,1.63,1.08,0.01,">1 nonsynonymous","C6Y Y119S G155N V173R",4
"lib2","SARS-CoV-2","CAATTAGATATAATAC",11,83.1,6,-4.84,2,1.5,1.28,0.03,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","CAATTAGCTAAAGCAA",7,47.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I S36W G146M",3
"lib2","SARS-CoV-2","CAATTAGCTAAGATTA",13,5.46,NA,NA,NA,NA,NA,NA,"stop","N58* A89T C158V",3
"lib2","SARS-CoV-2","CAATTAGGCGCAATTC",5,20.56,6.27,-4.57,0.8,1.5,1.15,0.03,">1 nonsynonymous","T3A S43G A105N S139N L188F",5
"lib2","SARS-CoV-2","CAATTAGTGCTACAAT",10,68.06,10.82,-0.01,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATTAGTTAAGACGA",13,10.29,NA,NA,NA,NA,NA,NA,"stop","N1M D90N F99S Y119G P149Q P169*",6
"lib2","SARS-CoV-2","CAATTATAGCATTGAG",5,154.06,9.31,-1.52,0.03,2.94,1.05,0,">1 nonsynonymous","I2Y Y39S K114Y Q144S G166S",5
"lib2","SARS-CoV-2","CAATTATATAGCGGAC",1,8.6,6,-4.84,2,1.5,1.2,0.08,">1 nonsynonymous","S41K C49G V71L N120T S129E",5
"lib2","SARS-CoV-2","CAATTATCAAAAGGGA",6,68.03,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N24Q F44T L131D S147N",4
"lib2","SARS-CoV-2","CAATTATCAAACTGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q R127D F185H",3
"lib2","SARS-CoV-2","CAATTATCCAGACACA",10,145.06,10.71,-0.12,0.05,2.92,1.1,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","CAATTATGGTAACCAC",8,2,NA,NA,NA,NA,NA,NA,"stop","W23C R73* F126T",3
"lib2","SARS-CoV-2","CAATTATTATAACAAT",8,0.64,NA,NA,NA,NA,NA,NA,"stop","F44I D59R A105R K114C T140L K198*",6
"lib2","SARS-CoV-2","CAATTATTCGTATCAG",1,39.9,8.77,-2.07,0.06,2.93,1.1,0,">1 nonsynonymous","P7T G166W S184V",3
"lib2","SARS-CoV-2","CAATTATTCTAAATCT",3,47.28,8.98,-1.85,0.1,2.37,1.1,0,">1 nonsynonymous","I2M I28S G174M",3
"lib2","SARS-CoV-2","CAATTATTCTCCATTA",3,57.31,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F44T G83E N107I T170Q",4
"lib2","SARS-CoV-2","CAATTATTGTTTTCCC",1,12.71,8.77,-2.07,0.16,2.01,1,0.01,">1 nonsynonymous","F12V I104Y S113A T170Q",4
"lib2","SARS-CoV-2","CAATTCAAAAGACTTC",4,1.31,NA,NA,NA,NA,NA,NA,"stop","F44D P96H Y119*",3
"lib2","SARS-CoV-2","CAATTCAAAAGGGCAA",4,24.27,10.81,-0.02,0.08,2.98,1.05,0,"1 nonsynonymous","T140C",1
"lib2","SARS-CoV-2","CAATTCAAAAGTCCGG",8,42.82,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L95G Y123A G166I",3
"lib2","SARS-CoV-2","CAATTCAAACGAAGCA",11,160.92,10.85,0.01,0.05,2.9,1.07,0,">1 nonsynonymous","Q163G V173L",2
"lib2","SARS-CoV-2","CAATTCAACATATTGA",4,46.98,10.8,-0.03,0.05,2.96,1.01,0,"1 nonsynonymous","T148Y",1
"lib2","SARS-CoV-2","CAATTCACATCCCGTA",5,26.37,6,-4.84,2,1.5,1.22,0.08,">1 nonsynonymous","K94W K128I",2
"lib2","SARS-CoV-2","CAATTCACGAAACATT",19,140.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9T P161K",2
"lib2","SARS-CoV-2","CAATTCAGAGTCACCA",1,12.07,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","F44C F47V C61A G83P",4
"lib2","SARS-CoV-2","CAATTCAGGCACCCAT",3,26.35,10.96,0.12,0.09,2.93,1.05,0,"1 nonsynonymous","N24R",1
"lib2","SARS-CoV-2","CAATTCAGTCAGTTCA",7,90.55,10.76,-0.07,0.04,2.99,1.02,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","CAATTCATCAAGACCC",2,47.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F99L F167T",2
"lib2","SARS-CoV-2","CAATTCATCAATGCAT",5,40.32,8.25,-2.59,0.1,2.71,1.09,0.01,">1 nonsynonymous","C61Y L125D",2
"lib2","SARS-CoV-2","CAATTCATGGGATGCA",12,29.58,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y119T F156S Y165H V173N V180S",5
"lib2","SARS-CoV-2","CAATTCATTAAAGTGA",3,79.23,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F8P L57T Y165E",3
"lib2","SARS-CoV-2","CAATTCCACATCGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib2","SARS-CoV-2","CAATTCCATATCATCT",8,16.37,10.06,-0.78,0.18,2.53,1.08,0.01,">1 nonsynonymous","A14D T15I A42N",3
"lib2","SARS-CoV-2","CAATTCCATCAGAACG",4,22.97,7.81,-3.03,0.28,1.8,1.13,0.03,">1 nonsynonymous","T63M G83M N92S",3
"lib2","SARS-CoV-2","CAATTCCATTACATCT",6,80.47,9.14,-1.69,0.05,2.85,1.09,0,"1 nonsynonymous","Y119E",1
"lib2","SARS-CoV-2","CAATTCCCCAGAACCA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","K48W T55H N92V F167*",4
"lib2","SARS-CoV-2","CAATTCCCGTACATGA",4,16.88,7.56,-3.27,0.17,2.03,1.1,0.01,">1 nonsynonymous","T100N Y175V",2
"lib2","SARS-CoV-2","CAATTCCTAAAGAATG",3,0.7,NA,NA,NA,NA,NA,NA,"stop","I2Y T15Y Y50* A81V F99Q L122I G166Q",7
"lib2","SARS-CoV-2","CAATTCCTATGTAAGG",1,59.15,10.84,0.01,0.06,2.9,1.12,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","CAATTCGAACATGAGA",3,7.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A105P S129A G174Y",3
"lib2","SARS-CoV-2","CAATTCGAAGCCAGTA",2,149.34,10.59,-0.24,0.03,2.97,1.04,0,">1 nonsynonymous","V37E S43T K56V T140V",4
"lib2","SARS-CoV-2","CAATTCGATCTGCCTA",3,4.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAATTCGCAAAAGATT",18,65.61,8.33,-2.5,0.19,1.5,1.01,0.02,"1 nonsynonymous","R124A",1
"lib2","SARS-CoV-2","CAATTCGTGAGACCTT",2,20.19,6.89,-3.95,0.18,1.83,1.11,0.01,">1 nonsynonymous","G116C Y159I",2
"lib2","SARS-CoV-2","CAATTCTAAAGATTAC",15,40.72,6,-4.84,2,1.53,1.15,0.01,">1 nonsynonymous","D68Q V77K Y165R",3
"lib2","SARS-CoV-2","CAATTCTAGCGTTTAT",9,69.03,6.04,-4.8,0.5,1.5,1.15,0,">1 nonsynonymous","P82Q L95Y R124H A192T",4
"lib2","SARS-CoV-2","CAATTCTCATTTTTCG",5,15.29,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","C6H G117L L125F Q144L",4
"lib2","SARS-CoV-2","CAATTCTGATCGCAGC",4,46.5,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","S19M K48Q A105M L122P N157Y V173S",6
"lib2","SARS-CoV-2","CAATTCTGCACAATGA",2,0.6,NA,NA,NA,NA,NA,NA,"stop","C61G L95* N107V S113T",4
"lib2","SARS-CoV-2","CAATTCTGGTTGCATA",2,7,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","T15R D97P G116E L131A E141I P149L",6
"lib2","SARS-CoV-2","CAATTCTTAACATTAA",4,63.18,10.24,-0.6,0.07,2.77,1.13,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","CAATTCTTAGTAAGAA",1,20.44,10.1,-0.73,0.12,2.59,1,0.01,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","CAATTCTTGGAGTGAT",4,78.99,9.02,-1.82,0.16,1.5,1,0.01,">1 nonsynonymous","I28W Y93L",2
"lib2","SARS-CoV-2","CAATTGAAATGTAGCA",7,132.91,8.34,-2.49,0.15,2.75,1.07,0.01,">1 nonsynonymous","C150N C158A",2
"lib2","SARS-CoV-2","CAATTGAACATAATAC",2,17.2,10.37,-0.47,0.11,2.78,1.05,0.01,">1 nonsynonymous","A81G S164F T201I",3
"lib2","SARS-CoV-2","CAATTGAACCAAGCCT",8,144.05,6.35,-4.48,0.56,1.5,1.23,0.02,">1 nonsynonymous","C6S S36W K56L D90S N120F",5
"lib2","SARS-CoV-2","CAATTGAACCGTTGCG",7,1.09,NA,NA,NA,NA,NA,NA,"stop","K87C P169*",2
"lib2","SARS-CoV-2","CAATTGAATTAATCGT",1,36.12,9.01,-1.83,0.29,1.5,1.01,0.03,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","CAATTGACAACACCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G G83L R136V G152N",4
"lib2","SARS-CoV-2","CAATTGACAACATCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* T100K",2
"lib2","SARS-CoV-2","CAATTGACCTCAGATT",9,3.54,NA,NA,NA,NA,NA,NA,"stop","T3P V11N D34N Y123* C195Y",5
"lib2","SARS-CoV-2","CAATTGACTCGCACAA",4,76.92,10.77,-0.07,0.06,2.92,1.09,0,"1 nonsynonymous","E141A",1
"lib2","SARS-CoV-2","CAATTGACTCGCGCGA",5,88.15,8.79,-2.05,0.06,2.89,1.09,0,">1 nonsynonymous","S41L S69T Y119V",3
"lib2","SARS-CoV-2","CAATTGACTTCGAGTT",2,2.82,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CAATTGATAAAGATAG",5,41.03,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L95R G101F Y143V G155M",4
"lib2","SARS-CoV-2","CAATTGATAACGACGA",10,19.28,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A89L V182Y",2
"lib2","SARS-CoV-2","CAATTGATTACCTCAT",4,34.63,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I28F K48W T55D F99I W106M E154Y Q163W",7
"lib2","SARS-CoV-2","CAATTGCCAAAAAGTC",6,64.58,10.85,0.02,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CAATTGCCCACTTTAA",6,0.39,NA,NA,NA,NA,NA,NA,"stop","G9* A33W I104T R124S V153P",5
"lib2","SARS-CoV-2","CAATTGCCTTGTGTTA",7,166.31,10.49,-0.34,0.03,2.92,1.04,0,"1 nonsynonymous","N13D",1
"lib2","SARS-CoV-2","CAATTGCGAAAAAACT",4,9.65,6.91,-3.92,0.37,1.5,1.04,0.02,">1 nonsynonymous","R27P F70L K87A T100C C158Q Q168L",6
"lib2","SARS-CoV-2","CAATTGCGATTGCAAC",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G T15L L38W I80F P96M G146D V182D",7
"lib2","SARS-CoV-2","CAATTGCTGACACACG",12,217.81,10.71,-0.13,0.03,2.95,1.07,0,">1 nonsynonymous","A33Q S43F",2
"lib2","SARS-CoV-2","CAATTGCTTTGCTATC",10,176.94,10.88,0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATTGGAAACATAGT",8,43.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31A K114F I142D S184M",4
"lib2","SARS-CoV-2","CAATTGGATTGATACG",1,57.38,9.12,-1.72,0.37,1.5,1,0.05,">1 nonsynonymous","F12C W106F",2
"lib2","SARS-CoV-2","CAATTGGCTCCAAGCT",2,27.17,10.72,-0.11,0.03,2.98,1.06,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","CAATTGGTACCAGCTG",7,134.75,9.87,-0.97,0.08,2.13,1.01,0,">1 nonsynonymous","T46L C61L P133F",3
"lib2","SARS-CoV-2","CAATTGGTAGACCACG",12,170.91,10.5,-0.34,0.05,2.97,1.05,0,">1 nonsynonymous","N1M G9Q I104F Q163N",4
"lib2","SARS-CoV-2","CAATTGTACAATGCCT",12,122.5,9.96,-0.88,0.03,2.64,1.05,0,">1 nonsynonymous","S129L T148F Q168S",3
"lib2","SARS-CoV-2","CAATTGTATAAGCGTA",7,72.32,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y35S G74D",2
"lib2","SARS-CoV-2","CAATTGTCAGACATTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G L95G V173M",3
"lib2","SARS-CoV-2","CAATTGTGAAGGTGAG",6,69.01,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","A81P A145M P169I",3
"lib2","SARS-CoV-2","CAATTGTTAAAAAATT",16,33.24,6.38,-4.46,0.46,1.5,1.16,0.01,">1 nonsynonymous","P54R I104K P169W",3
"lib2","SARS-CoV-2","CAATTGTTCACATAAT",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A G83F T170P L188M",4
"lib2","SARS-CoV-2","CAATTTAAAAGCCATG",26,440.35,10.72,-0.11,0.04,2.95,1.06,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","CAATTTAAACTTTTGT",1,19.74,9.44,-1.4,0.2,1.8,1,0.02,"1 nonsynonymous","W106E",1
"lib2","SARS-CoV-2","CAATTTAAATTAGGAA",9,167.54,9.9,-0.93,0.08,2.28,1.03,0,">1 nonsynonymous","T46N R136I",2
"lib2","SARS-CoV-2","CAATTTAACATAATAT",1,36.04,10.46,-0.38,0.06,2.94,1.09,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","CAATTTAATACTGTCA",5,50.25,10.75,-0.09,0.04,2.8,1.23,0,">1 nonsynonymous","T55N T201M",2
"lib2","SARS-CoV-2","CAATTTAATAGGCAGG",7,123.38,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F17E I28Q Y143V",3
"lib2","SARS-CoV-2","CAATTTAATATCTATG",2,63.37,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L60V K132V I142Y Y165G T201G",5
"lib2","SARS-CoV-2","CAATTTACCTGCCACG",4,64.51,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","I88K A105D G146T K198Q",4
"lib2","SARS-CoV-2","CAATTTACGGTATGCT",4,34.46,10.78,-0.06,0.03,2.97,1.05,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","CAATTTAGAAGATATA",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T A81S F99R L111F K132Y",5
"lib2","SARS-CoV-2","CAATTTAGAATCATGA",2,20.32,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A14N Y35A D68Q D90S F167P",5
"lib2","SARS-CoV-2","CAATTTAGGACTTCTT",4,19.76,10.24,-0.59,0.08,2.77,1.2,0.01,">1 nonsynonymous","C61H D98Y",2
"lib2","SARS-CoV-2","CAATTTATGACAACTA",7,51.25,9.65,-1.18,0.08,2.52,1.07,0,">1 nonsynonymous","I28L A42L K48S S53N G155V",5
"lib2","SARS-CoV-2","CAATTTATTGCCAGAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F R78T G86C Y123P T201K",5
"lib2","SARS-CoV-2","CAATTTCAACCCATTT",11,104.97,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6Y K26S Y119E C150D Y175I",5
"lib2","SARS-CoV-2","CAATTTCAGATAAACA",6,1.35,NA,NA,NA,NA,NA,NA,"stop","Y39I F99A Y143W N151* A192Y",5
"lib2","SARS-CoV-2","CAATTTCATATATTAT",3,16.84,6,-4.84,1.21,1.5,1.09,0.01,">1 nonsynonymous","S45C G51V D90T",3
"lib2","SARS-CoV-2","CAATTTCCCCTCAGCG",4,32.46,6,-4.84,2,1.88,1.12,0.01,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","CAATTTCCTCAAATTA",3,23.86,8.48,-2.35,0.17,1.53,1.15,0.01,">1 nonsynonymous","E10S A105M E141L",3
"lib2","SARS-CoV-2","CAATTTCGCTTAATGT",6,14.9,6.21,-4.62,1.98,3,1.15,0.01,">1 nonsynonymous","I2L N13R L38Y D137Q",4
"lib2","SARS-CoV-2","CAATTTCGTAGCAGAA",12,6.62,NA,NA,NA,NA,NA,NA,"stop","S41* C61R I88P Y143N",4
"lib2","SARS-CoV-2","CAATTTCTGATGACGA",2,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93I N118Q G166V",3
"lib2","SARS-CoV-2","CAATTTCTGGGCACCC",1,55.2,10.71,-0.13,0.08,2.89,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATTTCTTAAAAACG",5,86.92,9.46,-1.38,0.13,1.5,1.05,0.01,"1 nonsynonymous","V103C",1
"lib2","SARS-CoV-2","CAATTTGAAACCGAAA",8,56.17,10.56,-0.27,0.06,2.93,1.07,0,">1 nonsynonymous","L38V L122R G155A",3
"lib2","SARS-CoV-2","CAATTTGAAAGCTATA",12,124.64,9.64,-1.2,0.05,2.38,1.02,0,">1 nonsynonymous","S45P R78H V115T G152A K198T",5
"lib2","SARS-CoV-2","CAATTTGAATACAAAC",5,65.17,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L5R V11S N58K G117L T201I",5
"lib2","SARS-CoV-2","CAATTTGAATCGTCGA",1,51.49,10.87,0.03,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAATTTGATATTACAC",1,28.75,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","L125C Y175T",2
"lib2","SARS-CoV-2","CAATTTGGCCGCAACT",5,66.75,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C6V P149S G172R",3
"lib2","SARS-CoV-2","CAATTTGGTTACTTTG",6,59.13,9.71,-1.13,0.09,2.52,1.05,0,">1 nonsynonymous","S45V G155A",2
"lib2","SARS-CoV-2","CAATTTGTTACTCCCT",7,149.07,10.16,-0.68,0.03,2.95,1.02,0,"1 nonsynonymous","C31R",1
"lib2","SARS-CoV-2","CAATTTGTTAGTATAA",2,34.71,10.17,-0.66,0.07,2.77,1.05,0,">1 nonsynonymous","N40I T148A H189P",3
"lib2","SARS-CoV-2","CAATTTTAGGAATCTA",6,67.7,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K87A T140E N157P",3
"lib2","SARS-CoV-2","CAATTTTCACCTATTC",3,31.28,6.26,-4.57,0.94,1.5,1.18,0.03,">1 nonsynonymous","P82L D98R C150T",3
"lib2","SARS-CoV-2","CAATTTTCGAAGTGGC",10,167.89,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V32A I72Y L122S",3
"lib2","SARS-CoV-2","CAATTTTGCATCAGAA",3,13.7,8.53,-2.3,0.26,1.5,1.16,0.04,">1 nonsynonymous","G86R P197H",2
"lib2","SARS-CoV-2","CAATTTTTACCCATGT",8,37.15,6,-4.84,2,3,1.38,0.01,">1 nonsynonymous","F8D C61V V77R",3
"lib2","SARS-CoV-2","CAATTTTTCACGCGCC",6,163.82,7.5,-3.33,0.34,1.5,1.08,0.04,">1 nonsynonymous","G116F Y178K",2
"lib2","SARS-CoV-2","CAATTTTTCATAATCC",3,75.81,10.81,-0.02,0.05,2.89,1.13,0,"1 nonsynonymous","K199S",1
"lib2","SARS-CoV-2","CAATTTTTGATCTTCT",1,23.57,10.6,-0.23,0.06,2.95,1,0,"1 nonsynonymous","A14C",1
"lib2","SARS-CoV-2","CAATTTTTTTAGTCCA",3,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K A33D K87F S113R K199L",5
"lib2","SARS-CoV-2","CACAAAAAAAGTCTGT",5,77.57,10.17,-0.67,0.06,2.7,1.06,0,">1 nonsynonymous","A33D L122G S184W",3
"lib2","SARS-CoV-2","CACAAAAAACAGCCGG",5,135.74,10.78,-0.06,0.04,2.89,1.11,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","CACAAAAAATTGTGAT",6,104.2,9.15,-1.68,0.07,2.08,1.11,0,"1 nonsynonymous","Y21E",1
"lib2","SARS-CoV-2","CACAAAAACAAAGCCA",5,121.6,10.19,-0.65,0.03,2.92,1.01,0,">1 nonsynonymous","A33H F44D L122A",3
"lib2","SARS-CoV-2","CACAAAAACACACACA",8,105.07,10.82,-0.02,0.04,2.94,1.08,0,"1 nonsynonymous","Q163S",1
"lib2","SARS-CoV-2","CACAAAAACACCACTG",8,7.69,7.07,-3.76,0.46,1.5,1,0.05,">1 nonsynonymous","F44T E135L G152I V173I",4
"lib2","SARS-CoV-2","CACAAAAATATAAAAA",3,5.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15V S41G P82M",3
"lib2","SARS-CoV-2","CACAAAAATCGCTCCT",11,328.34,7.86,-2.98,0.09,2.24,1.12,0,">1 nonsynonymous","P54I Y175D T201M",3
"lib2","SARS-CoV-2","CACAAAAATTCCTGAG",2,17.6,10.02,-0.81,0.13,2.22,1,0.01,"1 nonsynonymous","K94F",1
"lib2","SARS-CoV-2","CACAAAACAAAAAATA",2,29.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5R V37S P96Y D98V V103R",5
"lib2","SARS-CoV-2","CACAAAACAAACGGTC",6,60.19,6.08,-4.75,0.36,1.5,1.15,0,">1 nonsynonymous","W106Q Y121V T148M V153T",4
"lib2","SARS-CoV-2","CACAAAACACAATATT",4,80.76,10.79,-0.05,0.04,2.98,1.05,0,">1 nonsynonymous","I72L T201G",2
"lib2","SARS-CoV-2","CACAAAACATTATACT",6,44.12,10.72,-0.11,0.05,2.9,1.11,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","CACAAAACCCCTAAAG",7,71.5,9.69,-1.14,0.07,2.17,1.11,0,">1 nonsynonymous","K94Y V173D",2
"lib2","SARS-CoV-2","CACAAAACCCGAGTGT",8,70.31,6.3,-4.54,0.61,1.5,1.18,0.01,">1 nonsynonymous","R25V G86L I104P F134L",4
"lib2","SARS-CoV-2","CACAAAACGGCATATT",1,18.61,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S36V Y50T G86T N171M",4
"lib2","SARS-CoV-2","CACAAAACTTATTAAA",8,1.44,NA,NA,NA,NA,NA,NA,"stop","T55A C150M L162*",3
"lib2","SARS-CoV-2","CACAAAAGAAACAGAC",14,1.74,NA,NA,NA,NA,NA,NA,"stop","R127N N151*",2
"lib2","SARS-CoV-2","CACAAAAGACATCTAG",3,28.1,10.65,-0.19,0.06,2.91,1.02,0,">1 nonsynonymous","V37Y G116A K198G",3
"lib2","SARS-CoV-2","CACAAAAGCGTGTAAA",6,44.52,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F12L S41T I88G L95K D112L V173S",6
"lib2","SARS-CoV-2","CACAAAAGGATTACCA",20,140.88,9.83,-1,0.05,2.18,1.05,0,">1 nonsynonymous","L5N F12L T85P",3
"lib2","SARS-CoV-2","CACAAAAGTAAATGTC",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150T E154K",2
"lib2","SARS-CoV-2","CACAAAATACGAAATA",1,45.07,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","D112Y P149A Q176P",3
"lib2","SARS-CoV-2","CACAAAATACGTTAAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CACAAAATCACTGAAA",9,45.91,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D59I Q84R V153S V182T",4
"lib2","SARS-CoV-2","CACAAAATGTCCTTAG",1,14.19,10.27,-0.57,0.1,2.57,1.07,0.01,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","CACAAAATGTCGCGCA",4,0,NA,NA,NA,NA,NA,NA,"stop","V37* D112G D137P",3
"lib2","SARS-CoV-2","CACAAAATTACAAACT",4,25.75,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F99V R127S K132R",3
"lib2","SARS-CoV-2","CACAAAATTATGGGAC",1,10.69,10.56,-0.28,0.2,2.74,1.14,0.02,">1 nonsynonymous","T140N F160T",2
"lib2","SARS-CoV-2","CACAAAATTCATAATC",6,25.32,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F17R D90V F99N",3
"lib2","SARS-CoV-2","CACAAACAAAGCCGCC",1,14.54,8.36,-2.48,0.18,2.13,1.06,0.02,">1 nonsynonymous","A105T Y143A",2
"lib2","SARS-CoV-2","CACAAACAAGAATCAA",4,43.21,6.75,-4.09,0.53,1.5,1.2,0.05,">1 nonsynonymous","I88Y G166K",2
"lib2","SARS-CoV-2","CACAAACAATCAAAGA",1,16.72,10.7,-0.13,0.26,2.33,1.01,0.03,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","CACAAACACGAATACA",11,97.8,9.18,-1.65,0.07,2.74,1.09,0,">1 nonsynonymous","T3L Q84T P169C",3
"lib2","SARS-CoV-2","CACAAACAGAATTAAA",2,52.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R73L N107S G152Q P197S T201I",5
"lib2","SARS-CoV-2","CACAAACAGGGGTATA",3,4.72,NA,NA,NA,NA,NA,NA,"stop","A18* D97E V180L",3
"lib2","SARS-CoV-2","CACAAACAGTGGATTT",2,24.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49S N157A",2
"lib2","SARS-CoV-2","CACAAACATAACTTGT",5,53.3,8.36,-2.48,0.15,2,1.08,0.01,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","CACAAACCATCTAAAC",1,29.34,10.2,-0.64,0.06,2.82,1.05,0,">1 nonsynonymous","I104G L122S",2
"lib2","SARS-CoV-2","CACAAACCCCAGGCCA",3,41.36,9.03,-1.8,0.26,1.61,1.12,0.03,">1 nonsynonymous","D34K S45V F62G T85S S129G S200P",6
"lib2","SARS-CoV-2","CACAAACCCGGTTTGT",2,38.19,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","C61S Y119M T170I",3
"lib2","SARS-CoV-2","CACAAACCGTAACGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","N1T P7* Y93P I104Y T148S",5
"lib2","SARS-CoV-2","CACAAACCTCCCCTCA",3,1.55,NA,NA,NA,NA,NA,NA,"stop","V37R S53F L60* C158W Y178N T201I",6
"lib2","SARS-CoV-2","CACAAACGAAAAAAAA",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D D90G I104V",3
"lib2","SARS-CoV-2","CACAAACGAACAAAAT",6,90.15,10.62,-0.22,0.04,2.95,1.03,0,">1 nonsynonymous","S36A S53N S184K",3
"lib2","SARS-CoV-2","CACAAACGCTATAACG",3,35.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N64Q Y91S Y121P",3
"lib2","SARS-CoV-2","CACAAACGTAGCGGAT",17,160.02,8.9,-1.94,0.12,1.86,1.11,0.01,">1 nonsynonymous","N4L T15P P149S G155L",4
"lib2","SARS-CoV-2","CACAAACGTGACGAAA",1,9.66,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","E76S W106P Y123M F160N",4
"lib2","SARS-CoV-2","CACAAACTAGAAACGT",5,75.15,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","T63S F99C P161R",3
"lib2","SARS-CoV-2","CACAAACTGGACTGAC",11,59.99,6,-4.84,1.65,1.5,1.14,0.02,">1 nonsynonymous","N13S G86V E154S",3
"lib2","SARS-CoV-2","CACAAACTTGAGGGTC",5,0,NA,NA,NA,NA,NA,NA,"stop","I2S K48M S69* C102W",4
"lib2","SARS-CoV-2","CACAAACTTGGGCAGG",9,1.9,NA,NA,NA,NA,NA,NA,"stop","C6R W106* N151Y Y175E",4
"lib2","SARS-CoV-2","CACAAAGAACAGACTA",1,4.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","CACAAAGAACGATTCG",5,124.72,10.39,-0.45,0.04,2.85,1.03,0,">1 nonsynonymous","I2N S139L",2
"lib2","SARS-CoV-2","CACAAAGAACGCCAAT",6,21.01,6,-4.84,1.91,1.5,1.08,0.03,">1 nonsynonymous","V52G L131Q",2
"lib2","SARS-CoV-2","CACAAAGAGTGAAACT",1,0.62,NA,NA,NA,NA,NA,NA,"stop","L5S Y93S S139* V153M",4
"lib2","SARS-CoV-2","CACAAAGATAAACAAC",3,36.09,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T15I S29I A105Y R124T E141L",5
"lib2","SARS-CoV-2","CACAAAGCTGTATATG",8,92.69,6.02,-4.82,0.85,1.5,1.12,0.01,">1 nonsynonymous","N13H L60T N92Y K198V",4
"lib2","SARS-CoV-2","CACAAAGTTCAACTAT",3,6.25,9.98,-0.86,0.18,2.71,1,0.01,">1 nonsynonymous","R16G T55M S139N S184M A190E",5
"lib2","SARS-CoV-2","CACAAATAATCATATA",5,78.24,6.13,-4.7,0.41,1.5,1.09,0.01,">1 nonsynonymous","V77K Y143V F160A",3
"lib2","SARS-CoV-2","CACAAATACCCACTTT",13,60.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19L I142R L162R",3
"lib2","SARS-CoV-2","CACAAATCAAAGTTCC",8,109.11,10.04,-0.8,0.06,2.45,1.04,0,">1 nonsynonymous","L131C P149L P197S",3
"lib2","SARS-CoV-2","CACAAATCACACACGA",2,44.66,10.81,-0.03,0.09,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAAATCTGATGAAC",6,73.77,10.72,-0.11,0.03,2.95,1.06,0,"1 nonsynonymous","L57I",1
"lib2","SARS-CoV-2","CACAAATGGCACAAAA",1,232.93,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35S G86Y P96D",3
"lib2","SARS-CoV-2","CACAAATTAATTTTCT",14,133.23,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C49S G117K",2
"lib2","SARS-CoV-2","CACAAATTATATGATC",6,97.27,10.34,-0.49,0.04,2.97,1.03,0,">1 nonsynonymous","R78H T148P",2
"lib2","SARS-CoV-2","CACAAATTCCCATCAT",4,51.54,6.3,-4.53,0.64,1.5,1.22,0.02,"1 nonsynonymous","R25D",1
"lib2","SARS-CoV-2","CACAACAAAAATATAA",7,52.35,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N4A F47I T55G P82Y I104H G174Q",6
"lib2","SARS-CoV-2","CACAACAAACGCTAAG",1,15.13,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","C6H V52S G101D N107R P161H L187C",6
"lib2","SARS-CoV-2","CACAACAACCAACCTT",2,23,10.35,-0.49,0.08,2.99,1.03,0,">1 nonsynonymous","I2M C61L D90K",3
"lib2","SARS-CoV-2","CACAACAACCTCCGCG",7,78.71,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F8E P82Q",2
"lib2","SARS-CoV-2","CACAACAACGAAAAGT",9,116.58,8.68,-2.16,0.16,1.5,1.09,0.01,">1 nonsynonymous","F8K I142T",2
"lib2","SARS-CoV-2","CACAACAACGTCAACA",14,96.47,6,-4.84,2,3,1.22,0,">1 nonsynonymous","N1C N40L I88Y V173E T201R",5
"lib2","SARS-CoV-2","CACAACAATAAATCAA",4,42.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89S G101A F185K",3
"lib2","SARS-CoV-2","CACAACACAAGACATT",1,33.32,10.87,0.04,0.05,2.96,1.05,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","CACAACACGCTGCTAA",5,36.04,6,-4.84,0.92,1.5,1.16,0.01,">1 nonsynonymous","T55N V77K K114Y G146R F167L",5
"lib2","SARS-CoV-2","CACAACACTCGTAGCC",5,63.28,10.44,-0.4,0.04,2.98,1,0,">1 nonsynonymous","I28L G116W",2
"lib2","SARS-CoV-2","CACAACAGAGGCCGGT",11,188.21,9.25,-1.59,0.05,2.71,1.09,0,"1 nonsynonymous","G117Y",1
"lib2","SARS-CoV-2","CACAACAGCATTACAA",4,6.85,6.54,-4.29,0.43,1.5,1.12,0.01,">1 nonsynonymous","D59R P96Y",2
"lib2","SARS-CoV-2","CACAACAGCTTGTCAA",7,21.81,6.12,-4.72,0.85,1.5,1.14,0.03,">1 nonsynonymous","I88K T140M",2
"lib2","SARS-CoV-2","CACAACATAATGATAA",3,53.11,9.6,-1.24,0.09,2.75,1.11,0,">1 nonsynonymous","C31F A42T T100K V153D",4
"lib2","SARS-CoV-2","CACAACATACAATTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","W23* T46N",2
"lib2","SARS-CoV-2","CACAACATGTAAGTCT",8,2.15,NA,NA,NA,NA,NA,NA,"stop","T55* A89C P149S C158* G166A Y178V",6
"lib2","SARS-CoV-2","CACAACATTGTTCGAA",2,9.82,6.21,-4.63,1.27,1.5,1.14,0.03,">1 nonsynonymous","C61V D137L",2
"lib2","SARS-CoV-2","CACAACCAGGTCCTGA",2,5.51,NA,NA,NA,NA,NA,0.47,">1 nonsynonymous","P96S R127Y",2
"lib2","SARS-CoV-2","CACAACCCAAACCTCG",8,57.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G74L L162S",2
"lib2","SARS-CoV-2","CACAACGCAAATCATT",8,3.13,NA,NA,NA,NA,NA,NA,"stop","K26Q G101*",2
"lib2","SARS-CoV-2","CACAACGCCAATTCGG",7,12.75,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","CACAACGCTAACACTT",5,58.07,10.05,-0.79,0.12,2.61,1.1,0.01,">1 nonsynonymous","N58I T100N T201P",3
"lib2","SARS-CoV-2","CACAACGCTATGACAA",3,2.79,NA,NA,NA,NA,NA,NA,"stop","F8Y I88* P133Q",3
"lib2","SARS-CoV-2","CACAACGGCTTTAGAA",3,52.8,9.37,-1.47,0.08,2.87,1.12,0,">1 nonsynonymous","A42G G117L F160Y V173L",4
"lib2","SARS-CoV-2","CACAACTAAAACCAGG",10,3.69,NA,NA,NA,NA,NA,NA,"stop","V37Q Y119Q R136* P191L",4
"lib2","SARS-CoV-2","CACAACTAAAAGCTAA",2,19.62,10.35,-0.49,0.13,2.85,1,0.01,">1 nonsynonymous","A14H V37I",2
"lib2","SARS-CoV-2","CACAACTAAGCCTATA",2,61.4,10.84,0,0.07,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAACTAGACCATTA",7,0.77,NA,NA,NA,NA,NA,NA,"stop","A18L D75* S108D P197T",4
"lib2","SARS-CoV-2","CACAACTATAAACTTC",5,38.45,6.18,-4.66,0.85,1.5,1.11,0.03,">1 nonsynonymous","N58F G74S P82D",3
"lib2","SARS-CoV-2","CACAACTCAGTCTCAA",6,38.47,9.83,-1.01,0.12,2.22,1.1,0.01,">1 nonsynonymous","N13S A33D K199S",3
"lib2","SARS-CoV-2","CACAACTCATATAGAT",2,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y N64F P96S",3
"lib2","SARS-CoV-2","CACAACTCTTTTACAC",4,24.07,7.81,-3.03,0.35,1.5,1,0.05,">1 nonsynonymous","S41E D90Y L122S T170I",4
"lib2","SARS-CoV-2","CACAACTGCTTTGCAG",2,24.71,10.74,-0.1,0.07,2.96,1.07,0,"1 nonsynonymous","T3H",1
"lib2","SARS-CoV-2","CACAACTTTGAGGCTA",7,33.5,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93I A190Y C195F",3
"lib2","SARS-CoV-2","CACAAGAAAACCCGAA",26,561.88,7.43,-3.41,0.11,1.74,1.12,0,">1 nonsynonymous","S113W N120T",2
"lib2","SARS-CoV-2","CACAAGAAAACGCGAA",10,66.82,7.65,-3.18,0.29,1.5,1,0.02,"1 nonsynonymous","R127F",1
"lib2","SARS-CoV-2","CACAAGAAATTGACAC",4,54.32,10.76,-0.07,0.06,2.91,1.09,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CACAAGAACAGCGTAA",2,28.46,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I72M I88P S113R R136W",4
"lib2","SARS-CoV-2","CACAAGAATAAACATA",8,3.5,NA,NA,NA,NA,NA,NA,"stop","R25* F167L",2
"lib2","SARS-CoV-2","CACAAGACACATCACG",1,12.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19L S139R",2
"lib2","SARS-CoV-2","CACAAGACACCACTCA",16,254.96,10.48,-0.35,0.04,2.9,1.08,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","CACAAGACCTAATGTA",1,17.15,10.8,-0.03,0.09,2.92,1,0,">1 nonsynonymous","N4P T201W",2
"lib2","SARS-CoV-2","CACAAGACGAGTTCTA",12,85.05,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S36I Q79R I104V K128L G146V F185T",6
"lib2","SARS-CoV-2","CACAAGACGGCGGCCA",1,5.5,6,-4.84,2,1.5,1.42,0.08,">1 nonsynonymous","I2N A33S S43W K56G R78L G83F E186V",7
"lib2","SARS-CoV-2","CACAAGACGTAAGAAA",7,46.22,8.51,-2.33,0.21,2.12,1.1,0.02,">1 nonsynonymous","T63W G117Y T201R",3
"lib2","SARS-CoV-2","CACAAGACGTTTGGAA",4,17.04,10.99,0.16,0.08,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CACAAGACTCGACCTA",3,21.41,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","F70K G83V A105S N151F",4
"lib2","SARS-CoV-2","CACAAGAGAAAAAACC",5,144.34,10.82,-0.01,0.06,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAAGAGAGCAATCA",5,62.01,7.85,-2.98,0.14,1.86,1.03,0.01,">1 nonsynonymous","N13E C61V I138L N157L",4
"lib2","SARS-CoV-2","CACAAGAGGGACAATT",8,139.45,10.83,0,0.04,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAAGATAATAGGTT",8,12.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A42I V71E V77K R124S",4
"lib2","SARS-CoV-2","CACAAGATATTAGCTC",7,109.65,10.85,0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAAGATGAACAGTC",1,60.43,9.92,-0.91,0.05,2.79,1.01,0,">1 nonsynonymous","D34C G116Y",2
"lib2","SARS-CoV-2","CACAAGATGTAGGGTC",1,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F S139Y Q163M",3
"lib2","SARS-CoV-2","CACAAGATTCCCAAGT",5,24.77,7.73,-3.1,0.4,1.5,1,0.05,">1 nonsynonymous","L162S T201K",2
"lib2","SARS-CoV-2","CACAAGCAGAAAACAT",3,54.62,6,-4.84,2,1.5,1.13,0,"1 nonsynonymous","I72R",1
"lib2","SARS-CoV-2","CACAAGCCTAAGCCCG",2,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57K Y121P A145V P149L",4
"lib2","SARS-CoV-2","CACAAGCCTAATATCA",4,49.14,9.72,-1.12,0.11,2.3,1.02,0.01,">1 nonsynonymous","A81D V115W",2
"lib2","SARS-CoV-2","CACAAGCGAGGTCGAT",1,69.89,10.83,0,0.06,2.88,1.13,0,">1 nonsynonymous","Y35F T63D G116P",3
"lib2","SARS-CoV-2","CACAAGGATAAATTAG",2,40.87,9.08,-1.75,0.14,2.81,1.08,0.01,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","CACAAGGCGGACGTCT",9,144.58,11.07,0.23,0.05,2.95,1.04,0,">1 nonsynonymous","V37G L122K S200L",3
"lib2","SARS-CoV-2","CACAAGGCTTACAGGG",14,199.98,9.02,-1.81,0.11,2.38,1.1,0.01,">1 nonsynonymous","A42F A105Y N120T P191G P197L",5
"lib2","SARS-CoV-2","CACAAGTGAGATTCTA",1,26.44,10.84,0.01,0.06,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAAGTTGAACCAAT",2,37.99,9.9,-0.93,0.05,2.85,1.07,0,">1 nonsynonymous","L60A D97N P169S",3
"lib2","SARS-CoV-2","CACAATAAAACTTTAA",5,45.65,11,0.16,0.05,3,1,0,">1 nonsynonymous","Y39L T201L",2
"lib2","SARS-CoV-2","CACAATAACAGTCAGC",2,9.01,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S45M W106P",2
"lib2","SARS-CoV-2","CACAATAACCTTAAAT",1,11.39,10.94,0.1,0.06,3,1.02,0,">1 nonsynonymous","N4G R16V",2
"lib2","SARS-CoV-2","CACAATAACTGTCACA",5,94.61,9.64,-1.2,0.08,2.07,1.1,0,">1 nonsynonymous","Y35L Y39H S43P A105V V173S",5
"lib2","SARS-CoV-2","CACAATAAGAACTCCA",2,9.07,7.6,-3.24,0.33,1.5,1.08,0.05,">1 nonsynonymous","P7F N13L Y50P D98S W106R A190S",6
"lib2","SARS-CoV-2","CACAATAAGAATCCTG",1,21.73,9.08,-1.75,0.1,2.62,1.07,0.01,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","CACAATAAGCAGGGAT",17,233.76,10.08,-0.76,0.04,2.71,1.07,0,">1 nonsynonymous","D112V L122R",2
"lib2","SARS-CoV-2","CACAATAATCATCAAG",14,54.8,6.5,-4.33,0.62,1.5,1.3,0.04,">1 nonsynonymous","C6F S41Y R78V S113C R127W P169L",6
"lib2","SARS-CoV-2","CACAATACACCAATGC",2,8.34,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3P G9L Y91V T140P",4
"lib2","SARS-CoV-2","CACAATACACCTAAAG",5,44.13,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7T G86W N107V",3
"lib2","SARS-CoV-2","CACAATACTCACCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C31R V37* A42G S129D G172M",5
"lib2","SARS-CoV-2","CACAATACTTAGGAAA",4,20.76,6.44,-4.39,0.57,1.5,1.12,0.03,">1 nonsynonymous","D34Y I72K K94F F156S",4
"lib2","SARS-CoV-2","CACAATACTTTAAAGG",1,7.71,9.6,-1.24,0.19,2.39,1.02,0.01,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","CACAATAGTCAAGACC",6,49.52,8.02,-2.81,0.21,1.5,1.03,0.02,">1 nonsynonymous","N64K N107I",2
"lib2","SARS-CoV-2","CACAATATAAAACGGA",12,143.64,10.66,-0.18,0.03,2.95,1.05,0,">1 nonsynonymous","N120V G152N P191G",3
"lib2","SARS-CoV-2","CACAATATCAAAATCC",6,62.27,9.97,-0.87,0.08,2.48,1.11,0,"1 nonsynonymous","R136F",1
"lib2","SARS-CoV-2","CACAATATCTACCTCG",3,13.45,10.54,-0.29,0.07,2.97,1.02,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","CACAATATGACAATCC",8,111.82,10.48,-0.36,0.04,3,1.02,0,">1 nonsynonymous","S36N G155A G196W",3
"lib2","SARS-CoV-2","CACAATCAACGATAAG",1,106.81,10.29,-0.55,0.05,2.77,1.04,0,"1 nonsynonymous","D34Y",1
"lib2","SARS-CoV-2","CACAATCACAATCACA",4,67.28,10.26,-0.58,0.05,2.8,1.02,0,">1 nonsynonymous","I2V G9D T15M T55V D97L",5
"lib2","SARS-CoV-2","CACAATCATAAGTATG",1,25.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7L V103F N130L S147L F167R K198V",6
"lib2","SARS-CoV-2","CACAATCCCCACTAGA",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44A T100A",2
"lib2","SARS-CoV-2","CACAATCGTACATATA",7,0.47,NA,NA,NA,NA,NA,NA,"stop","P7F P96F S113N E141*",4
"lib2","SARS-CoV-2","CACAATCTAAACTACG",10,95.81,8.26,-2.58,0.12,1.93,1.05,0.01,">1 nonsynonymous","I2M S113W P149K",3
"lib2","SARS-CoV-2","CACAATCTCGAAGCGA",7,153.61,8.34,-2.5,0.16,1.7,1.08,0.01,">1 nonsynonymous","G9S F44V N157F",3
"lib2","SARS-CoV-2","CACAATCTGCTCCATG",4,75.37,10.88,0.05,0.06,2.97,1.07,0,">1 nonsynonymous","N40H P197K",2
"lib2","SARS-CoV-2","CACAATCTTTCAGATC",2,15.33,6.19,-4.64,0.7,1.5,1.18,0.02,">1 nonsynonymous","E10A V37P D90G I104T",4
"lib2","SARS-CoV-2","CACAATGAAAAAAAGC",5,50.35,10.17,-0.66,0.05,2.82,1.03,0,">1 nonsynonymous","T100L A105C",2
"lib2","SARS-CoV-2","CACAATGAAAGCACAT",5,35.63,6.67,-4.16,0.51,1.5,1.05,0.06,">1 nonsynonymous","T3K A22T P133A V173T S200F",5
"lib2","SARS-CoV-2","CACAATGAACCTGAAA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","D59S I104L V153*",3
"lib2","SARS-CoV-2","CACAATGATGGCAAAC",2,30.08,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","T63C F70S V103Y N120P E141G N171Q",6
"lib2","SARS-CoV-2","CACAATGCAATTCACA",13,124.47,10.86,0.03,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAATGGACAGGATA",8,79.13,8.42,-2.42,0.28,1.5,1,0.04,"1 nonsynonymous","V181S",1
"lib2","SARS-CoV-2","CACAATGGCCAGCGAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","E10Q W23H S69*",3
"lib2","SARS-CoV-2","CACAATGGTAAAAGTA",7,5.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58G R78S W106R",3
"lib2","SARS-CoV-2","CACAATGTTACAAAAT",3,56.66,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L5D W23I V37F S53G R124V",5
"lib2","SARS-CoV-2","CACAATTAAAATCATT",2,30.74,9.11,-1.73,0.12,2.5,1.1,0.01,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","CACAATTAAAGTCAAC",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T C49P T55R L125C T170D",5
"lib2","SARS-CoV-2","CACAATTAAATCGGTT",6,2.23,NA,NA,NA,NA,NA,NA,"stop","F12V I72W G86*",3
"lib2","SARS-CoV-2","CACAATTAACACAAAA",8,242.19,10.7,-0.13,0.04,2.9,1.1,0,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","CACAATTAAGGAGGAC",10,36.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3Y A18T R25M S147Y",4
"lib2","SARS-CoV-2","CACAATTAATACGCAT",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C Y119C P197Q",3
"lib2","SARS-CoV-2","CACAATTAGATACGAA",3,1.01,NA,NA,NA,NA,NA,NA,"stop","T3P D90F K199*",3
"lib2","SARS-CoV-2","CACAATTAGATACTAA",3,19.1,10.87,0.04,0.06,2.95,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAATTCAAAATAAT",2,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151E V181A K198V",3
"lib2","SARS-CoV-2","CACAATTCCAGACAAC",2,10.89,10.34,-0.5,0.09,2.78,1.09,0.01,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","CACAATTCCCCTCAGG",3,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S E154L",2
"lib2","SARS-CoV-2","CACAATTCTCTCCCAT",7,161.89,10.43,-0.41,0.03,2.89,1.06,0,"1 nonsynonymous","W106F",1
"lib2","SARS-CoV-2","CACAATTGAAAAGAAT",8,166.04,8.58,-2.26,0.08,2.95,1.05,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","CACAATTGACATAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R N58K Q176L",3
"lib2","SARS-CoV-2","CACAATTGAGCACGAA",3,126.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6D A14G Y35R I142L Q176Y",5
"lib2","SARS-CoV-2","CACAATTGTTTTGATA",5,87.63,9.75,-1.08,0.05,2.94,1.09,0,">1 nonsynonymous","L122W Q168S G174L",3
"lib2","SARS-CoV-2","CACAATTTAAATCGCC",4,6.65,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","C6Y T15S S19Q P54Q I104S Y143V V153L G174W Y178I",9
"lib2","SARS-CoV-2","CACAATTTCATTTAAT",3,16.78,10.79,-0.04,0.05,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACACAAAAACTAGAC",9,55.43,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Q79G L95Q G116M",3
"lib2","SARS-CoV-2","CACACAAAAATTTGAT",2,87.82,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S36W T85M Y119G P161N G174V R179Q",6
"lib2","SARS-CoV-2","CACACAAAACGCGGAC",1,50.46,10.82,-0.02,0.06,2.88,1.15,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","CACACAAAATTAAATA",2,0.96,NA,NA,NA,NA,NA,NA,"stop","R16Y P96H C102* C158S",4
"lib2","SARS-CoV-2","CACACAAACCTAACAC",3,27.4,8.45,-2.39,0.17,1.5,1,0.01,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","CACACAAAGGATATAA",1,10.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9Q F62L L183H",3
"lib2","SARS-CoV-2","CACACAAAGGCTCTAA",1,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A T15G Y39M G83H P96V",5
"lib2","SARS-CoV-2","CACACAAATAAAGGGC",6,20.2,10.86,0.03,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACACAAATCTCTAAC",2,61.6,10.4,-0.44,0.04,2.9,1.04,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","CACACAACAACCCAAA",5,1.86,NA,NA,NA,NA,NA,NA,"stop","N13* S29P D97K P149T",4
"lib2","SARS-CoV-2","CACACAACACCTCACT",2,11.14,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","L38N P54H T55A F62K V71G T85A G155D",7
"lib2","SARS-CoV-2","CACACAACATCTTTCT",6,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13D F17R E141G Q176T",4
"lib2","SARS-CoV-2","CACACAACCACTAAAT",5,136.01,10.16,-0.68,0.05,2.83,1.04,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","CACACAACCGAGATGA",4,56.87,10.34,-0.5,0.06,2.96,1.05,0,">1 nonsynonymous","T85S E154C",2
"lib2","SARS-CoV-2","CACACAACTCAAATGC",5,12.43,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F8I P96W I138S F160D",4
"lib2","SARS-CoV-2","CACACAAGACAATAAT",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I T63K P82T",3
"lib2","SARS-CoV-2","CACACAAGATAAGATT",1,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56C E154S",2
"lib2","SARS-CoV-2","CACACAAGTTGTCCTT",7,104.37,10.78,-0.06,0.07,2.91,1.05,0,">1 nonsynonymous","K128V T201Y",2
"lib2","SARS-CoV-2","CACACAATCGATTAAT",1,22.11,9.6,-1.24,0.14,2.64,1.06,0.01,">1 nonsynonymous","C61P R127S G196R",3
"lib2","SARS-CoV-2","CACACAATGACGGTTG",4,32.97,10.05,-0.79,0.11,2.27,1.05,0,">1 nonsynonymous","I2V A22V V37D V173Y",4
"lib2","SARS-CoV-2","CACACAATTCTAGACA",5,47.93,10.72,-0.12,0.06,2.92,1.11,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","CACACACAAATTGCAA",4,62.35,6.55,-4.28,0.35,1.5,1.2,0.01,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","CACACACAATTCGGGA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","G9* D98V N118S T148N N151L",5
"lib2","SARS-CoV-2","CACACACACATCAGTA",3,25.49,10.89,0.06,0.03,3,1,0,"1 nonsynonymous","R16V",1
"lib2","SARS-CoV-2","CACACACACTGAGCCA",7,11.89,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V52H Y91R V103S L131A",4
"lib2","SARS-CoV-2","CACACACCCCGTATCC",5,69.4,8.68,-2.16,0.09,2.97,1.08,0,">1 nonsynonymous","T55Y F126E Q168F",3
"lib2","SARS-CoV-2","CACACACCCTTGCCCA",4,117.97,8.53,-2.31,0.11,2.76,1.07,0,">1 nonsynonymous","F134L T170V L188N T201P",4
"lib2","SARS-CoV-2","CACACACCTTTACCCT",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I D34L K87G P161Q",4
"lib2","SARS-CoV-2","CACACACGACATCACC",3,166.49,8.38,-2.46,0.1,2.68,1.1,0,">1 nonsynonymous","L122W K132D N157K",3
"lib2","SARS-CoV-2","CACACACGAGCGAAGT",4,111.53,6.16,-4.68,0.67,1.5,1.19,0.01,">1 nonsynonymous","R16E N30R S147F C150E E154D G172L",6
"lib2","SARS-CoV-2","CACACACGTAAAACAA",4,57.36,10.76,-0.08,0.03,2.91,1.09,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","CACACACGTTATTATG",18,243.62,6,-4.84,1.66,1.5,1.18,0.01,">1 nonsynonymous","I28N D68T K94H",3
"lib2","SARS-CoV-2","CACACACTATAAGATG",13,143.19,8.61,-2.23,0.09,2.93,1.06,0,">1 nonsynonymous","Y119D N130P Q144L V173I",4
"lib2","SARS-CoV-2","CACACACTTTTAACAA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","A33C S69E K94L G116C Q176*",5
"lib2","SARS-CoV-2","CACACAGAAGAATGGG",4,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L C49R Y119L T201A",4
"lib2","SARS-CoV-2","CACACAGACTACCCAC",1,25.83,10.16,-0.68,0.08,2.81,1.06,0,"1 nonsynonymous","Y159W",1
"lib2","SARS-CoV-2","CACACAGAGTATCTTA",10,133.21,8.46,-2.38,0.08,2.82,1.1,0,">1 nonsynonymous","T55N D97L G146A N157T",4
"lib2","SARS-CoV-2","CACACAGCAGATGATT",5,33.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F A89M",2
"lib2","SARS-CoV-2","CACACAGCGTTGCCAC",2,8.14,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G74T C158S",2
"lib2","SARS-CoV-2","CACACAGCTGAATCCT",3,44.42,10.78,-0.05,0.05,2.96,1.05,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","CACACAGTAACAATCT",3,64.92,10.57,-0.26,0.04,2.93,1.08,0,">1 nonsynonymous","D98K N120S",2
"lib2","SARS-CoV-2","CACACAGTCTAACGCG",5,80.31,10.53,-0.3,0.03,2.93,1.08,0,"1 nonsynonymous","P191L",1
"lib2","SARS-CoV-2","CACACAGTCTTTCTAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135D",1
"lib2","SARS-CoV-2","CACACAGTGGAATAAC",6,71.23,6.97,-3.87,0.31,1.5,1.08,0.02,">1 nonsynonymous","G51F G166W A190L",3
"lib2","SARS-CoV-2","CACACAGTGTGAGAGG",13,178.72,10.77,-0.07,0.04,2.95,1.06,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","CACACAGTTAAGGACC",7,70.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P96R P149R C158L Y165F",4
"lib2","SARS-CoV-2","CACACAGTTCAAAAGT",18,81.2,9.58,-1.26,0.09,1.99,1.1,0,">1 nonsynonymous","L5S T15E P96R",3
"lib2","SARS-CoV-2","CACACATAAAACAATC",2,54.21,10.73,-0.11,0.03,2.96,1.05,0,">1 nonsynonymous","Y35L F44H",2
"lib2","SARS-CoV-2","CACACATAAGCAGATT",6,171.08,10.76,-0.07,0.04,2.94,1.07,0,">1 nonsynonymous","R16D E141G",2
"lib2","SARS-CoV-2","CACACATAAGTGAAAT",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F F12S L38A",3
"lib2","SARS-CoV-2","CACACATGAAGCGTTT",5,23.36,8.63,-2.2,0.38,1.5,1,0.07,"1 nonsynonymous","S184P",1
"lib2","SARS-CoV-2","CACACATTACAGAAAA",13,0.3,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","CACACATTCTATGAAC",3,19.14,8.51,-2.32,0.32,1.5,1.23,0.05,"1 nonsynonymous","L183T",1
"lib2","SARS-CoV-2","CACACATTTTACGGAC",5,1.22,NA,NA,NA,NA,NA,NA,"stop","A14V K94*",2
"lib2","SARS-CoV-2","CACACCAAAACATCAG",5,21.77,6.14,-4.69,1.2,1.5,1.19,0.05,">1 nonsynonymous","F99N P149L S184H",3
"lib2","SARS-CoV-2","CACACCACAAGCAAAG",2,14.6,10.66,-0.18,0.06,2.9,1.11,0,">1 nonsynonymous","I2V V32A K128S",3
"lib2","SARS-CoV-2","CACACCACCCTACGCA",5,72.06,9.38,-1.45,0.11,1.87,1.1,0.01,">1 nonsynonymous","K48T A105T S139L K199R",4
"lib2","SARS-CoV-2","CACACCACGCAACAAC",2,16.34,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","Y91S L122T S129I V153T L162G",5
"lib2","SARS-CoV-2","CACACCAGTAAGTGAA",6,80.75,10.82,-0.01,0.06,2.9,1.1,0,">1 nonsynonymous","I2S S41N",2
"lib2","SARS-CoV-2","CACACCAGTCAGCGCG",1,2.98,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CACACCATAAGCATCA",2,12.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V G101N",2
"lib2","SARS-CoV-2","CACACCCAACATTCAG",5,54.42,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T55K K87Y R124H P149L Q176L K198E",6
"lib2","SARS-CoV-2","CACACCCACTCCCGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","W23* N64A K87P N92R S129A Y143C T201L",7
"lib2","SARS-CoV-2","CACACCCAGGTACCCA",2,28.51,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N64W D97F E135P",3
"lib2","SARS-CoV-2","CACACCCCAAACCTGC",7,108.78,10.91,0.07,0.05,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CACACCCCACAGTTAA",11,147.23,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N40S V77H K94P Y121V R136N N171T Y178T",7
"lib2","SARS-CoV-2","CACACCCCCAGCTCAC",10,102.09,10.69,-0.15,0.04,2.92,1.06,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","CACACCCGGTTCCTTA",2,10.9,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A14S S41T V103H G152A L162V Y175G",6
"lib2","SARS-CoV-2","CACACCCTACCGCTTA",2,45.09,9.45,-1.38,0.09,2.85,1.16,0,">1 nonsynonymous","N58P T85A G166V",3
"lib2","SARS-CoV-2","CACACCGAACCACGAA",3,13.45,10.76,-0.08,0.07,3,1.03,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","CACACCGACGAGATCA",1,8.72,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","G9I K48T T100Y S113T V180T",5
"lib2","SARS-CoV-2","CACACCGATCCAGGCG",1,20.06,9.54,-1.29,0.14,2.15,1.12,0.01,">1 nonsynonymous","S45C D98Y",2
"lib2","SARS-CoV-2","CACACCGATTGAACCA",5,106.31,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","A145R Y159R",2
"lib2","SARS-CoV-2","CACACCGCAGTTTCTT",4,104.83,9.63,-1.2,0.08,2.71,1.06,0,">1 nonsynonymous","T100D L125A K128Y S147D",4
"lib2","SARS-CoV-2","CACACCGCTATTACTA",5,0,NA,NA,NA,NA,NA,NA,"stop","C31* S41T P54F L60W D97E V103I",6
"lib2","SARS-CoV-2","CACACCGGCTTGCAAC",9,209.25,10.17,-0.67,0.04,2.67,1.07,0,">1 nonsynonymous","T3L N120F I138K",3
"lib2","SARS-CoV-2","CACACCGGTGTTTACA",3,1.79,NA,NA,NA,NA,NA,NA,"stop","D68G Q84* Y93T G117K Y123* E141M C150K",7
"lib2","SARS-CoV-2","CACACCGGTTAATGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","CACACCTAAACTGTCC",12,197.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y91V Y119M P161D S184V",4
"lib2","SARS-CoV-2","CACACCTAACCCACCC",1,16.7,6.44,-4.4,0.6,1.51,1.23,0.02,">1 nonsynonymous","K114A V181Q",2
"lib2","SARS-CoV-2","CACACCTATAGACAGG",4,10.91,10.77,-0.07,0.1,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CACACCTGCACATGAG",15,4.94,NA,NA,NA,NA,NA,NA,"stop","T3L R78H I88*",3
"lib2","SARS-CoV-2","CACACGACACAATATG",7,189.02,10.52,-0.31,0.04,2.91,1.02,0,">1 nonsynonymous","V37T D98I",2
"lib2","SARS-CoV-2","CACACGAGTAAATAAT",2,0.86,NA,NA,NA,NA,NA,NA,"stop","A14N D68*",2
"lib2","SARS-CoV-2","CACACGATAAACTATG",3,50.28,6.98,-3.85,0.26,1.5,1.09,0.02,">1 nonsynonymous","P54T Y175I",2
"lib2","SARS-CoV-2","CACACGATGAAGCCTA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","L95R T201*",2
"lib2","SARS-CoV-2","CACACGCACTAAAAAC",1,105.51,9.35,-1.48,0.07,2.33,1.03,0,">1 nonsynonymous","N24S K87V V103L",3
"lib2","SARS-CoV-2","CACACGCAGCTAAGTG",6,36.8,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A42P K56S F167S",3
"lib2","SARS-CoV-2","CACACGCCCAACCCGT",2,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29P V103A D137Y",3
"lib2","SARS-CoV-2","CACACGCCCACTCTCC",11,103.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55V I88K Y119W S129F D137C S184N",6
"lib2","SARS-CoV-2","CACACGCGTTTTGCAA",6,77.2,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R73T Y121V A145Q Y178F A190C P197S",6
"lib2","SARS-CoV-2","CACACGCTATATTAAA",6,0.79,NA,NA,NA,NA,NA,NA,"stop","A14D P96S V103L S129* P169K",5
"lib2","SARS-CoV-2","CACACGCTCGGCTCTT",3,20.13,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T3N Y50K T63L Y66N",4
"lib2","SARS-CoV-2","CACACGGGATGGTGAT",5,6.43,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S43L K56Y I88R F99Q R127L",5
"lib2","SARS-CoV-2","CACACGGGGGCTTCCC",3,0.82,NA,NA,NA,NA,NA,NA,"stop","I88R A145* G155H",3
"lib2","SARS-CoV-2","CACACGTAATAACAGA",2,17.73,7.33,-3.5,0.38,1.5,1.07,0.04,">1 nonsynonymous","I2T G83R F134P S164R",4
"lib2","SARS-CoV-2","CACACGTTAACAGTAA",8,164.96,10.22,-0.62,0.03,2.93,1.04,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","CACACGTTATCATTAG",5,79.72,9.94,-0.9,0.06,2.77,1.02,0,">1 nonsynonymous","F47T C61D",2
"lib2","SARS-CoV-2","CACACGTTCCCTGAAA",5,42.86,9.71,-1.12,0.08,2.06,1.05,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","CACACGTTTAATCACG",1,15.75,11.03,0.2,0.05,3,1.01,0,"1 nonsynonymous","K199D",1
"lib2","SARS-CoV-2","CACACTAAATTTAGAA",1,50.81,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K94N G101V G174K",3
"lib2","SARS-CoV-2","CACACTAACAGTAATC",2,19.42,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","K56A R124S",2
"lib2","SARS-CoV-2","CACACTAATCGGCTTC",1,10.45,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G51I W106Y",2
"lib2","SARS-CoV-2","CACACTAATGTAAATC",6,1.32,NA,NA,NA,NA,NA,NA,"stop","A42S N58R D97*",3
"lib2","SARS-CoV-2","CACACTAGCAAACATA",16,242.03,10.03,-0.81,0.04,2.47,1.06,0,">1 nonsynonymous","V65M I142T Q163T G196I",4
"lib2","SARS-CoV-2","CACACTAGCCGATCCA",2,12.95,6,-4.84,2,1.5,1.12,0.03,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","CACACTAGGAAACGGT",9,290.63,10.65,-0.18,0.05,2.91,1.09,0,">1 nonsynonymous","N1M V65M I138L",3
"lib2","SARS-CoV-2","CACACTATAAAAAATG",5,64.28,10.78,-0.06,0.03,2.95,1.06,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","CACACTATAGGCGCAG",8,34.28,10.47,-0.37,0.06,3,1.03,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CACACTATATCACTAC",5,150.72,10.03,-0.81,0.06,2.69,1.08,0,">1 nonsynonymous","V103I E154C",2
"lib2","SARS-CoV-2","CACACTATTAGAATTT",2,75.88,10.36,-0.47,0.05,2.88,1.03,0,">1 nonsynonymous","N40Y K94R",2
"lib2","SARS-CoV-2","CACACTATTCCAAAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95C P133C S139L",3
"lib2","SARS-CoV-2","CACACTATTCGATCAT",6,51.99,10.69,-0.15,0.04,2.98,1.03,0,">1 nonsynonymous","R16S A81S",2
"lib2","SARS-CoV-2","CACACTATTTTAATTC",5,5.6,6.63,-4.21,0.61,3,1.16,0.02,">1 nonsynonymous","F8A D90Y G172E",3
"lib2","SARS-CoV-2","CACACTCAATTCTTCT",3,15.81,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","T63V N107D D112R E141S V173F",5
"lib2","SARS-CoV-2","CACACTCACATATGAA",11,0.57,NA,NA,NA,NA,NA,NA,"stop","A67S I80Y K87Y F99* I104Y S108T G174D T201S",8
"lib2","SARS-CoV-2","CACACTCCAATAAGCA",5,88.25,10.44,-0.4,0.05,2.8,1.17,0,">1 nonsynonymous","T3L V32S S41F",3
"lib2","SARS-CoV-2","CACACTCCGAATGTGG",7,121.22,10.83,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACACTCCTTGCCCAA",2,1.06,NA,NA,NA,NA,NA,NA,"stop","C6Y Y39W K56V N64* N92*",5
"lib2","SARS-CoV-2","CACACTCGTGAAGCAC",9,187.74,9.9,-0.94,0.04,2.77,1.06,0,">1 nonsynonymous","S43N D59V D75R",3
"lib2","SARS-CoV-2","CACACTCTCACTCGAA",2,11.12,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","D34S S45Q P82N A89R",4
"lib2","SARS-CoV-2","CACACTCTCCGCATGC",12,63.8,8.93,-1.9,0.17,1.94,1.17,0.01,">1 nonsynonymous","D34V G152V",2
"lib2","SARS-CoV-2","CACACTGCAACTAGGC",6,52.27,8.79,-2.05,0.1,2.42,1.07,0,">1 nonsynonymous","C6W N30L K87G P197Q",4
"lib2","SARS-CoV-2","CACACTGGCGTAGCAT",13,7.17,NA,NA,NA,NA,NA,NA,"stop","N4* F17A S36*",3
"lib2","SARS-CoV-2","CACACTGGTTTTTGTT",8,120.65,10.63,-0.2,0.02,2.92,1.1,0,">1 nonsynonymous","R27K C61W Y91F",3
"lib2","SARS-CoV-2","CACACTGTATTCCAAA",1,22.54,10.95,0.12,0.06,2.98,1.01,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","CACACTGTCCAGGTTG",1,22.45,6.17,-4.67,0.82,1.5,1.26,0.02,">1 nonsynonymous","I138T V153L F167C",3
"lib2","SARS-CoV-2","CACACTTAAAGAGTGA",5,90.62,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S139G C150W",2
"lib2","SARS-CoV-2","CACACTTACAAATTAT",3,13.88,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V37N F99W I104R",3
"lib2","SARS-CoV-2","CACACTTTCTCAAAAA",10,114.61,9.19,-1.65,0.13,1.5,1.11,0.01,"1 nonsynonymous","S19V",1
"lib2","SARS-CoV-2","CACACTTTTCCTTGTA",2,82.61,10.83,0,0.06,2.96,1.07,0,">1 nonsynonymous","T46L T55L",2
"lib2","SARS-CoV-2","CACAGAAACTAGCCTA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","L60* P161R",2
"lib2","SARS-CoV-2","CACAGAAATTATCATA",8,142.7,9.7,-1.13,0.09,2.41,1.02,0,">1 nonsynonymous","C6S A22Q V65A N120S",4
"lib2","SARS-CoV-2","CACAGAACCACAGTAA",3,97.37,10.8,-0.04,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAGAACTAGGACAC",5,31.86,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y91G F126L C158V",3
"lib2","SARS-CoV-2","CACAGAACTTGATAGC",7,190.29,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N13S A22G L162R Q168L",4
"lib2","SARS-CoV-2","CACAGAAGATACCCTG",4,9.19,10.76,-0.08,0.06,3,1.02,0,"1 nonsynonymous","V194A",1
"lib2","SARS-CoV-2","CACAGAAGATATTAAT",4,61.42,8.35,-2.49,0.14,2.6,1,0.01,">1 nonsynonymous","S41I F47L V115Q F126T",4
"lib2","SARS-CoV-2","CACAGAAGCAAGCGGC",5,100.08,9.68,-1.16,0.08,2.42,1.05,0,">1 nonsynonymous","C6L V11F V37W C61K A81G V115K S147T",7
"lib2","SARS-CoV-2","CACAGAAGGTACAATC",6,27.22,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N1I A18E F62G G83N A89H F99N",6
"lib2","SARS-CoV-2","CACAGAATTGAATATG",8,63.9,9.87,-0.96,0.05,1.99,1.06,0,"1 nonsynonymous","Q84P",1
"lib2","SARS-CoV-2","CACAGACTTTCCGAAA",7,126.12,8.6,-2.24,0.13,2.34,1.06,0.01,">1 nonsynonymous","L57A N120T",2
"lib2","SARS-CoV-2","CACAGAGAAACCGAAA",14,324.01,10.89,0.06,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAGAGAGTCAAATC",4,0.3,NA,NA,NA,NA,NA,NA,"stop","A14F V77K I88N N107D D112V I138L Q168*",7
"lib2","SARS-CoV-2","CACAGAGATATATATT",5,108.89,8.56,-2.28,0.09,2.68,1.08,0,">1 nonsynonymous","E10S G146D P169H",3
"lib2","SARS-CoV-2","CACAGAGCAATTCTCG",10,42.64,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27V P96T R124S",3
"lib2","SARS-CoV-2","CACAGAGCCTCTTATT",10,45.05,8.82,-2.01,0.26,1.5,1.12,0.03,">1 nonsynonymous","Y50A Y91F",2
"lib2","SARS-CoV-2","CACAGAGTAAGCTACC",1,54.27,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S29M P96L W106C",3
"lib2","SARS-CoV-2","CACAGAGTTAGATATA",10,46.52,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D75T K87M R124L",3
"lib2","SARS-CoV-2","CACAGATGAAATACGA",2,14.99,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S45Y C61P P96Q G172L",4
"lib2","SARS-CoV-2","CACAGATTTAAGTACT",5,15.23,9.83,-1.01,0.08,2.1,1.02,0,">1 nonsynonymous","D34A T140W",2
"lib2","SARS-CoV-2","CACAGCAACTAATCAA",1,20.24,10.29,-0.55,0.07,2.89,1.14,0,">1 nonsynonymous","Y178S A190R",2
"lib2","SARS-CoV-2","CACAGCAATTTCTATT",2,14.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60A Q84Y E141C G152I T201R",5
"lib2","SARS-CoV-2","CACAGCACAGGCTCTG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib2","SARS-CoV-2","CACAGCACATGGGATG",12,42.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60D N120E P149G L183A",4
"lib2","SARS-CoV-2","CACAGCACTCTTAAGA",7,204.97,10.3,-0.53,0.02,2.88,1.06,0,">1 nonsynonymous","L57K L122A",2
"lib2","SARS-CoV-2","CACAGCAGAATGATCT",1,32.75,9.83,-1.01,0.1,2.65,1.09,0,"1 nonsynonymous","R136F",1
"lib2","SARS-CoV-2","CACAGCAGAATTGCGT",1,8.18,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C49L P96H G146F P161R",4
"lib2","SARS-CoV-2","CACAGCATGGCAAACA",1,6.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25P",1
"lib2","SARS-CoV-2","CACAGCATTAACAAGG",7,14.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15E V37S V103G",3
"lib2","SARS-CoV-2","CACAGCGAGGACTGAC",3,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I A14V A33E S69R F156M A192V",6
"lib2","SARS-CoV-2","CACAGCGATAATCACT",2,0,NA,NA,NA,NA,NA,NA,"stop","A33G Y93*",2
"lib2","SARS-CoV-2","CACAGCGATGTAATTT",8,81.8,10.59,-0.25,0.03,2.98,1.03,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CACAGCGCAAATTGTC",3,66.56,9.99,-0.84,0.07,2.45,1.04,0,">1 nonsynonymous","I28G Y39Q",2
"lib2","SARS-CoV-2","CACAGCGGTCTTTAAA",22,237.78,10.75,-0.09,0.06,2.9,1.12,0,"1 nonsynonymous","S200R",1
"lib2","SARS-CoV-2","CACAGCGTACAATATT",15,5.22,NA,NA,NA,NA,NA,NA,"stop","V11Y K87Y T148*",3
"lib2","SARS-CoV-2","CACAGCTAACGGCCTA",3,110.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7Y S36K G51P R124V L131K S139M S200F",7
"lib2","SARS-CoV-2","CACAGCTATGAAAAGT",24,245.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7L G83A P133I Y143V N157C",5
"lib2","SARS-CoV-2","CACAGCTGAATGTTCG",1,35.13,9.84,-1,0.12,2.35,1.02,0.01,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","CACAGCTGATACATTG",5,28.05,10.71,-0.12,0.08,3,1.04,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","CACAGCTGGAATTCAT",14,127.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10R F62K G83S I88F E135R",5
"lib2","SARS-CoV-2","CACAGGAAAACAAAAA",1,20.51,10.58,-0.25,0.08,3,1.03,0,"1 nonsynonymous","L183I",1
"lib2","SARS-CoV-2","CACAGGAAAACAATAA",3,38.43,9.37,-1.47,0.11,2.48,1.09,0,">1 nonsynonymous","P7Q S53D I104L P149L Y165H V173L",6
"lib2","SARS-CoV-2","CACAGGAAAACATCTA",4,59.47,7.25,-3.59,0.12,1.6,1.12,0,">1 nonsynonymous","L5S A89D V153N",3
"lib2","SARS-CoV-2","CACAGGAACAATCAAA",3,0.87,NA,NA,NA,NA,NA,NA,"stop","Y35V W106* F156A",3
"lib2","SARS-CoV-2","CACAGGAACAGCCTAC",9,20.42,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","E10G L95E A190S",3
"lib2","SARS-CoV-2","CACAGGAAGGATTTCG",8,105.73,10.82,-0.02,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CACAGGAATAATTCCA",4,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q F12C R16P V77R V103N",5
"lib2","SARS-CoV-2","CACAGGAATAATTGAC",4,16.08,7.02,-3.82,0.33,1.5,1.06,0.03,">1 nonsynonymous","A14M V103L S113W T148L",4
"lib2","SARS-CoV-2","CACAGGACACAATGAT",4,66.58,8.94,-1.9,0.06,2.78,1.1,0,">1 nonsynonymous","F44S L125P S129I",3
"lib2","SARS-CoV-2","CACAGGACCATAAGAT",8,86,10.73,-0.11,0.04,2.93,1.1,0,">1 nonsynonymous","I2Y S139R",2
"lib2","SARS-CoV-2","CACAGGACCTGCATTA",4,46.08,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44R V65P R127P R136V",4
"lib2","SARS-CoV-2","CACAGGACGGACCCAA",3,26.81,7.1,-3.74,0.45,1.5,1.12,0.05,">1 nonsynonymous","F8Q K26S I138G",3
"lib2","SARS-CoV-2","CACAGGACTCTAAACG",7,131.36,9.83,-1,0.04,2.7,1.02,0,">1 nonsynonymous","I28L Y165W",2
"lib2","SARS-CoV-2","CACAGGAGGACAAAAA",9,59.78,9.97,-0.86,0.08,2.18,1.12,0,">1 nonsynonymous","F47S K56N",2
"lib2","SARS-CoV-2","CACAGGATCACCACTC",7,38.79,6.17,-4.67,0.88,1.5,1.17,0.02,">1 nonsynonymous","D34Y P82S D90S A192T",4
"lib2","SARS-CoV-2","CACAGGATGTAACGAC",4,63.76,10.78,-0.06,0.04,3,1.02,0,"1 nonsynonymous","S43W",1
"lib2","SARS-CoV-2","CACAGGATTGACATCA",8,17.63,8.73,-2.11,0.36,1.5,1.04,0.04,">1 nonsynonymous","L60R K94L",2
"lib2","SARS-CoV-2","CACAGGCGATTTATTT",10,71.65,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","N4P G51C A89C",3
"lib2","SARS-CoV-2","CACAGGCGTATATAAT",5,57.91,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","N4F Y93P",2
"lib2","SARS-CoV-2","CACAGGCTATAAACCT",4,36.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28T G86F",2
"lib2","SARS-CoV-2","CACAGGTATCCATAAT",9,26.09,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N1K A105N R136F",3
"lib2","SARS-CoV-2","CACAGGTTAGCTTACT",5,7.88,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","N107F K114T T201L",3
"lib2","SARS-CoV-2","CACAGGTTGTCACGCG",3,25.57,8.29,-2.54,0.27,1.5,1.11,0.03,"1 nonsynonymous","I72S",1
"lib2","SARS-CoV-2","CACAGGTTTCTGATTA",1,5.36,6,-4.84,2,3,1.01,0,">1 nonsynonymous","N13F G51W W106C N151L F167V",5
"lib2","SARS-CoV-2","CACAGTAACCCGCGCA",5,129.97,9.87,-0.97,0.04,2.84,1.04,0,">1 nonsynonymous","L5N Y66F E141L T170Q T201N",5
"lib2","SARS-CoV-2","CACAGTAATAACTATG",6,10.73,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","D34R K56F Y93A F134V",4
"lib2","SARS-CoV-2","CACAGTAATATAGTTA",11,224.34,7.89,-2.94,0.16,1.71,1.12,0.01,">1 nonsynonymous","Y119A N157A",2
"lib2","SARS-CoV-2","CACAGTACTGTAACCT",2,39.95,6,-4.84,2,2.93,1.2,0,">1 nonsynonymous","N13T R73V G83N D90L P133A T140D",6
"lib2","SARS-CoV-2","CACAGTAGCTTATGAA",6,72.71,8.71,-2.12,0.07,2.92,1.06,0,">1 nonsynonymous","Y91L Y119L",2
"lib2","SARS-CoV-2","CACAGTATAATCGACC",4,87.02,9.92,-0.92,0.07,2.31,1,0,">1 nonsynonymous","C49F T55G L60Y",3
"lib2","SARS-CoV-2","CACAGTCAAAACCTTT",1,24.79,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A105H L131R",2
"lib2","SARS-CoV-2","CACAGTCACAAAAAGT",11,246.78,10.65,-0.18,0.03,2.94,1.06,0,">1 nonsynonymous","I28L G116S",2
"lib2","SARS-CoV-2","CACAGTCATAACAATA",4,18.6,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","L5R L38Y F99D K114N G116R E141V G146W",7
"lib2","SARS-CoV-2","CACAGTCCAAATCACT",4,77.85,9.95,-0.88,0.07,2.67,1.02,0,">1 nonsynonymous","I2V Y35D F44Q F134Y",4
"lib2","SARS-CoV-2","CACAGTCCTCAAACAC",2,9.45,10.73,-0.11,0.05,2.8,1.25,0,"1 nonsynonymous","F8I",1
"lib2","SARS-CoV-2","CACAGTCGGGGACTAG",6,58.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P149N G152L F156G F167C",4
"lib2","SARS-CoV-2","CACAGTCTCAACGTGA",5,81.12,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","G74D G146I Q176L",3
"lib2","SARS-CoV-2","CACAGTGAATAAATTA",2,24.64,10.08,-0.75,0.13,2.03,1.04,0.01,">1 nonsynonymous","L38P A192E",2
"lib2","SARS-CoV-2","CACAGTGCCAATGTCC",4,62.99,10.2,-0.63,0.06,2.73,1.1,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","CACAGTGCCGTACCAC",3,66.74,8.38,-2.45,0.17,1.5,1.04,0.01,">1 nonsynonymous","C6T A89V T100Y",3
"lib2","SARS-CoV-2","CACAGTGCCTTCCCAC",4,124.93,8,-2.83,0.11,1.77,1.08,0,">1 nonsynonymous","P149N F156K Y165L",3
"lib2","SARS-CoV-2","CACAGTGCGATACCCG",3,48.45,10.74,-0.09,0.05,2.88,1.14,0,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","CACAGTGGCGCGAATA",3,21.19,8.28,-2.55,0.35,1.5,1.05,0.07,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","CACAGTGTGAAGTCTG",1,36.25,7.28,-3.55,0.3,1.5,1.08,0.03,">1 nonsynonymous","Y35V K94L F160L",3
"lib2","SARS-CoV-2","CACAGTGTTGTTAGTA",1,49.77,8.18,-2.65,0.16,2.47,1.1,0.01,">1 nonsynonymous","A145P N157E",2
"lib2","SARS-CoV-2","CACAGTGTTTCTAATT",1,0.4,NA,NA,NA,NA,NA,NA,"stop","G9S T201*",2
"lib2","SARS-CoV-2","CACAGTTAGCACAGTT",6,78.75,10.14,-0.7,0.08,2.64,1.02,0,">1 nonsynonymous","Y39I K48Y K132S",3
"lib2","SARS-CoV-2","CACAGTTCAAGCAATG",11,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S A105L T140E Y165F",4
"lib2","SARS-CoV-2","CACAGTTGGGATATAC",2,18.21,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","V11G T100S T148S E154Y",4
"lib2","SARS-CoV-2","CACAGTTGGTAGACCA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","Y39G Y123*",2
"lib2","SARS-CoV-2","CACAGTTTAATCCTTC",3,0.22,NA,NA,NA,NA,NA,NA,"stop","F17Q C49* D90T W106* G174F",5
"lib2","SARS-CoV-2","CACATAAAAAGTGTCC",2,59.75,10.7,-0.14,0.03,2.97,1.05,0,"1 nonsynonymous","V115Q",1
"lib2","SARS-CoV-2","CACATAAACGCTCTCA",10,3.4,NA,NA,NA,NA,NA,NA,"stop","Y91R P149*",2
"lib2","SARS-CoV-2","CACATAAATGCAAACG",4,56.65,10.75,-0.09,0.04,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATAACAAATCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5T D112W N120E K128* A145C",5
"lib2","SARS-CoV-2","CACATAACCAGTAGCC",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53A G155V S164L",3
"lib2","SARS-CoV-2","CACATAACCCAGTTCT",2,24.93,10.73,-0.1,0.07,2.86,1.09,0,">1 nonsynonymous","L60R V173R",2
"lib2","SARS-CoV-2","CACATAACGGCCCATA",3,58.79,10.36,-0.48,0.05,2.83,1.08,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","CACATAAGAAAAAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S G9* K87* D97C Y121Q",5
"lib2","SARS-CoV-2","CACATAAGCTGTAAGT",8,38.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T3S L57F N58Q I88G",4
"lib2","SARS-CoV-2","CACATAAGTGAGGGAC",4,45.21,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9L T100F P133Q G152L C158V",5
"lib2","SARS-CoV-2","CACATAAGTTTTAGGA",8,39.55,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D90N Y121G G166L T201I",4
"lib2","SARS-CoV-2","CACATAATCCATGGGC",5,68.16,10.67,-0.17,0.11,2.73,1.07,0,"1 nonsynonymous","E186R",1
"lib2","SARS-CoV-2","CACATAATCGTCACCG",4,30.66,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L60K R124C",2
"lib2","SARS-CoV-2","CACATAATGAGAAAAA",10,0.92,NA,NA,NA,NA,NA,NA,"stop","D68K T85* N109C N120F R179F",5
"lib2","SARS-CoV-2","CACATACAAAAGATCA",2,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S G196R",2
"lib2","SARS-CoV-2","CACATACAAATGCCCA",10,40.89,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G74A P161L T201V",3
"lib2","SARS-CoV-2","CACATACAAGTATAAA",1,62.15,10.76,-0.07,0.04,2.98,1.04,0,"1 nonsynonymous","T15P",1
"lib2","SARS-CoV-2","CACATACAAGTGCGTT",7,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L A105T N118A Y143H",4
"lib2","SARS-CoV-2","CACATACAAGTTGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* D34A L95F V103I E154G",5
"lib2","SARS-CoV-2","CACATACCAAGCGTGT",7,52.08,6.9,-3.94,0.35,1.5,1.25,0.02,">1 nonsynonymous","C6V K48W E141S T201S",4
"lib2","SARS-CoV-2","CACATACCGTGAACTA",5,141.07,8.89,-1.94,0.1,1.59,1.08,0,">1 nonsynonymous","N40L T46W V71C",3
"lib2","SARS-CoV-2","CACATACGACATTGAA",1,24.07,10.19,-0.65,0.09,2.97,1.04,0.01,"1 nonsynonymous","P169H",1
"lib2","SARS-CoV-2","CACATACTTTTACAAT",11,140.63,7.88,-2.96,0.14,1.5,1.06,0.01,">1 nonsynonymous","L38D A145T P169T",3
"lib2","SARS-CoV-2","CACATAGAAACGTACG",3,14.54,8.49,-2.35,0.21,1.9,1.08,0.02,">1 nonsynonymous","Y121T N151V",2
"lib2","SARS-CoV-2","CACATAGAACAAGTCT",6,192.05,9.79,-1.05,0.09,2.35,1.04,0,">1 nonsynonymous","A81K D98C",2
"lib2","SARS-CoV-2","CACATAGAACCAACAT",4,38.79,10.91,0.07,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATAGAGTAACACT",5,64.04,6,-4.84,1.53,1.5,1.22,0.02,">1 nonsynonymous","N64Q P82Y E141M",3
"lib2","SARS-CoV-2","CACATAGATTTAAGCA",4,99.22,8.14,-2.69,0.09,2.12,1.08,0,">1 nonsynonymous","D90T Y119A L125C",3
"lib2","SARS-CoV-2","CACATAGCGTTGCCGC",3,77.41,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y91T N120S P133Q S139N",4
"lib2","SARS-CoV-2","CACATAGGATAAACAC",1,5.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M D59L Y91D G101E",4
"lib2","SARS-CoV-2","CACATAGGCCATATAA",1,5.22,6.17,-4.66,0.64,1.5,1.08,0.01,">1 nonsynonymous","L95T P133N",2
"lib2","SARS-CoV-2","CACATAGGTACGTAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","N13C V20E L38K N120* S129D",5
"lib2","SARS-CoV-2","CACATAGTCCAGAAAT",1,10.55,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G86T W106V L162R",3
"lib2","SARS-CoV-2","CACATAGTGACCCAAC",4,16.92,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y91R D98V V103R",3
"lib2","SARS-CoV-2","CACATAGTGCTGGATT",2,5.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Q V65W D98L Y119S",4
"lib2","SARS-CoV-2","CACATATAATCCCATC",3,0.32,NA,NA,NA,NA,NA,NA,"stop","S147W R179* T201*",3
"lib2","SARS-CoV-2","CACATATAATTTATCA",12,160,10.87,0.04,0.07,2.92,1.11,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","CACATATACCATACTA",4,73.19,7.97,-2.87,0.45,1.5,1,0.07,">1 nonsynonymous","S19K Y35T T55Y T63Y Y121L",5
"lib2","SARS-CoV-2","CACATATACTAAAATG",5,95.94,9.6,-1.23,0.11,1.96,1.03,0,">1 nonsynonymous","S41P N64P D98C",3
"lib2","SARS-CoV-2","CACATATATCAGTAGA",1,31.65,10.53,-0.31,0.06,2.82,1.14,0,">1 nonsynonymous","S41Y C61W",2
"lib2","SARS-CoV-2","CACATATCATTACGCG",3,10.63,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A33T P161Y G196V",3
"lib2","SARS-CoV-2","CACATATGAAACGAGT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","A18* D68R H189D",3
"lib2","SARS-CoV-2","CACATATGAAAGCGAA",1,48.51,10.35,-0.49,0.1,2.52,1.08,0,">1 nonsynonymous","T55N N109R R127K N151G H189P P197S",6
"lib2","SARS-CoV-2","CACATATGAGGGCCAG",2,17.21,6,-4.84,2,3,1.07,0,">1 nonsynonymous","S45T N58I Q84K K94S N107P S113G K132C",7
"lib2","SARS-CoV-2","CACATATGATTAAAAT",4,128.8,10.48,-0.36,0.04,2.92,1.06,0,">1 nonsynonymous","L122N G174P L187R",3
"lib2","SARS-CoV-2","CACATATGTCATCGCA",11,115.62,8.94,-1.89,0.09,1.63,1.1,0,">1 nonsynonymous","S36M S45I E141V",3
"lib2","SARS-CoV-2","CACATATTAATCATTA",11,143.68,9.76,-1.08,0.08,2.22,1.08,0,">1 nonsynonymous","F17L C61S",2
"lib2","SARS-CoV-2","CACATATTCGTCAAAA",3,56.4,9.92,-0.91,0.05,2.36,1.04,0,">1 nonsynonymous","T3M Y35G N40T A190V",4
"lib2","SARS-CoV-2","CACATATTGAAGAGAA",5,66.76,8.35,-2.49,0.13,2.34,1.08,0.01,">1 nonsynonymous","F62Q G117A E141S",3
"lib2","SARS-CoV-2","CACATATTTAAATGAC",1,18.54,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G51L I88K I142N",3
"lib2","SARS-CoV-2","CACATATTTGAGACAC",7,0.5,NA,NA,NA,NA,NA,NA,"stop","K26T S41* T100L",3
"lib2","SARS-CoV-2","CACATATTTGCTGCAA",3,71.99,10.47,-0.37,0.03,3,1.01,0,"1 nonsynonymous","S164G",1
"lib2","SARS-CoV-2","CACATCAAAACAATAA",2,12.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9A Y91N N120T K128V R136K",5
"lib2","SARS-CoV-2","CACATCAAAGATAGTC",7,61.56,9.86,-0.98,0.12,1.68,1.05,0.01,">1 nonsynonymous","K48Q P82L",2
"lib2","SARS-CoV-2","CACATCAACAGTTAAA",3,0.25,NA,NA,NA,NA,NA,NA,"stop","T3F Q84C E141T C158*",4
"lib2","SARS-CoV-2","CACATCAATATTAACT",1,9.17,6.12,-4.72,2,3,1.15,0,">1 nonsynonymous","F44L S69G D112L A190H",4
"lib2","SARS-CoV-2","CACATCAATTAAGGTG",3,36.37,9.23,-1.61,0.04,3,1.03,0,">1 nonsynonymous","F99W T170L",2
"lib2","SARS-CoV-2","CACATCAATTTCACAA",3,24.28,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G152P Y159N",2
"lib2","SARS-CoV-2","CACATCACATATCTCA",5,47.22,9.79,-1.05,0.02,2.96,1.04,0,"1 nonsynonymous","R73A",1
"lib2","SARS-CoV-2","CACATCACTAACATAG",20,331.87,10.61,-0.23,0.03,2.91,1.09,0,">1 nonsynonymous","S45G T55S",2
"lib2","SARS-CoV-2","CACATCAGCAGCATCA",7,120.04,10.61,-0.22,0.04,2.95,1.06,0,">1 nonsynonymous","C61G V115L",2
"lib2","SARS-CoV-2","CACATCATAACTGCAA",9,54.8,10.11,-0.73,0.08,2.6,1,0,">1 nonsynonymous","N120K P133K",2
"lib2","SARS-CoV-2","CACATCATCAACCGAG",3,86.13,10.83,-0.01,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATCATGACAGCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10D A22L Q84*",3
"lib2","SARS-CoV-2","CACATCATTAAACATA",3,77.03,10.59,-0.24,0.03,2.93,1.06,0,">1 nonsynonymous","N120R I138A",2
"lib2","SARS-CoV-2","CACATCATTACTCAAA",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Y G83S Y91R",3
"lib2","SARS-CoV-2","CACATCATTTGCTTTA",16,57.16,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F70N Y178H",2
"lib2","SARS-CoV-2","CACATCCAATTACTTT",12,140.02,10.87,0.04,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATCCCCTCGTTAT",6,1.4,NA,NA,NA,NA,NA,NA,"stop","Q163* F167T",2
"lib2","SARS-CoV-2","CACATCCGATAGGAGG",7,92,8.38,-2.46,0.13,2.53,1.06,0.01,">1 nonsynonymous","N1K A33C F62M A67F K87S N171L T201R",7
"lib2","SARS-CoV-2","CACATCGAAAGGAAAC",7,135.11,10.8,-0.04,0.05,2.92,1.1,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","CACATCGCGTGGGCCT",1,145.42,8.93,-1.9,0.18,1.5,1,0.01,">1 nonsynonymous","A22V Y178A L183I",3
"lib2","SARS-CoV-2","CACATCGTTAACCAAA",1,17.75,10.95,0.11,0.07,2.92,1.1,0,">1 nonsynonymous","S129E T148I",2
"lib2","SARS-CoV-2","CACATCGTTTTTACCG",3,122.91,10.9,0.07,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATCTAAAATTGTT",7,14.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K128R G146R L162H E186I",4
"lib2","SARS-CoV-2","CACATCTCACAGACCT",8,0.7,NA,NA,NA,NA,NA,NA,"stop","I80Q K87* D97S S129I Y143C K198E",6
"lib2","SARS-CoV-2","CACATCTCTGCCAGAC",16,5.75,8.61,-2.22,0.48,1.5,1.16,0.08,">1 nonsynonymous","T15Y D98V N107D L122F E186C",5
"lib2","SARS-CoV-2","CACATCTCTGCGCTCT",2,13.52,6.08,-4.76,0.27,3,1.03,0.01,">1 nonsynonymous","T55K G101R L122K",3
"lib2","SARS-CoV-2","CACATCTTTACTTACG",1,5.36,11.13,0.29,0.16,2.92,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CACATGAACAACCTAG",2,16.74,6.66,-4.18,0.23,2.52,1.17,0.01,">1 nonsynonymous","Y35A G155S Q168K",3
"lib2","SARS-CoV-2","CACATGAACAATCAAC",7,12.72,8.69,-2.14,0.24,1.5,1.07,0.02,">1 nonsynonymous","A14S V37D S43E G86A G101D G166S",6
"lib2","SARS-CoV-2","CACATGAACAGGAGGC",2,15.83,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S45K V103T Y143L",3
"lib2","SARS-CoV-2","CACATGACGCATGGAA",9,159.96,10.46,-0.37,0.03,2.93,1.04,0,">1 nonsynonymous","K26D D90L P197L",3
"lib2","SARS-CoV-2","CACATGATGAGTACGG",1,40.65,9.56,-1.28,0.13,2.63,1.05,0.01,">1 nonsynonymous","D90W N118A K198R",3
"lib2","SARS-CoV-2","CACATGCATTAGCCAG",9,0.17,NA,NA,NA,NA,NA,NA,"stop","S19L F44S G155H L162E K198*",5
"lib2","SARS-CoV-2","CACATGCCAATATAGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q G83S Q84K W106R Q144V Q168I",6
"lib2","SARS-CoV-2","CACATGCCTTAGATGA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","C61* E135S P191F P197L",4
"lib2","SARS-CoV-2","CACATGCGAAACAAAT",1,9.63,10.62,-0.21,0.14,2.52,1.45,0.01,">1 nonsynonymous","I2C V37S G152N",3
"lib2","SARS-CoV-2","CACATGCGAATCAACG",3,16.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N40S F99S F134A",3
"lib2","SARS-CoV-2","CACATGCGTTAACTAA",8,71.95,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","G101P Y175F",2
"lib2","SARS-CoV-2","CACATGCTCGCCTAAG",1,15.8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60V N151I V180W",3
"lib2","SARS-CoV-2","CACATGGAACTCGAAT",3,66.31,10.39,-0.45,0.06,2.93,1.09,0,">1 nonsynonymous","T55D G155E",2
"lib2","SARS-CoV-2","CACATGGAATGACCAC",11,57.78,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39P P96S D137L G146S",4
"lib2","SARS-CoV-2","CACATGGAGTACAAAC",5,72.45,10.25,-0.58,0.03,2.9,1.01,0,">1 nonsynonymous","T3S A33L G116L",3
"lib2","SARS-CoV-2","CACATGGCAAAATTGT",3,76.9,10.14,-0.7,0.06,2.8,1.03,0,">1 nonsynonymous","L5I L57S S113A",3
"lib2","SARS-CoV-2","CACATGGCGGTAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S19E A81* V173H",3
"lib2","SARS-CoV-2","CACATGGCTGAGCCCT",10,217.43,10.75,-0.09,0.04,2.93,1.07,0,">1 nonsynonymous","I138S K199S",2
"lib2","SARS-CoV-2","CACATGTAAAATATAG",7,59.56,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N64P Y119I Y143K",3
"lib2","SARS-CoV-2","CACATGTAAGTGCCGG",1,15.74,10.18,-0.66,0.08,2.9,1,0.01,">1 nonsynonymous","S36T N107C",2
"lib2","SARS-CoV-2","CACATGTACTTGTAGT",1,24.79,9.92,-0.91,0.12,2.24,1.04,0.01,">1 nonsynonymous","A14Y C61I",2
"lib2","SARS-CoV-2","CACATGTCGAAAATCC",2,40.54,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L122T G172K",2
"lib2","SARS-CoV-2","CACATGTTATAGTAGT",8,64.3,10.73,-0.11,0.07,2.9,1.08,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","CACATGTTGAGTCACT",2,16.19,10.69,-0.14,0.1,2.89,1.11,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","CACATTAAAATATGAC",16,3.13,NA,NA,NA,NA,NA,NA,"stop","C61* E135G P149S F167R",4
"lib2","SARS-CoV-2","CACATTAACTGTCATG",4,0.3,NA,NA,NA,NA,NA,NA,"stop","G86V D98* T148V",3
"lib2","SARS-CoV-2","CACATTAAGAGACCTA",4,50.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6P N40W G101T T170K",4
"lib2","SARS-CoV-2","CACATTAAGCAAATTG",3,59.12,10.07,-0.76,0.07,2.74,1.06,0,">1 nonsynonymous","D98I E141M",2
"lib2","SARS-CoV-2","CACATTACCACTGAAT",3,31.9,10.69,-0.14,0.06,2.86,1.14,0,"1 nonsynonymous","N120H",1
"lib2","SARS-CoV-2","CACATTACTACAGAAC",4,49.62,10.82,-0.02,0.07,2.86,1.17,0,"1 nonsynonymous","K48N",1
"lib2","SARS-CoV-2","CACATTACTACTTAAG",1,17.63,10.71,-0.13,0.06,2.87,1.12,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","CACATTACTATTTTAA",9,0.98,NA,NA,NA,NA,NA,NA,"stop","N4Q G9E Q84* K128N",4
"lib2","SARS-CoV-2","CACATTAGTCGATTGC",1,5.01,10.84,0.01,0.13,3,1.07,0,">1 nonsynonymous","K56L P149N",2
"lib2","SARS-CoV-2","CACATTAGTTTGACTA",11,2.76,NA,NA,NA,NA,NA,NA,"stop","D68P D97*",2
"lib2","SARS-CoV-2","CACATTATAAAAGAAC",5,37.09,9.25,-1.59,0.04,2.94,1.05,0,">1 nonsynonymous","K56I L125Q E141W V153M",4
"lib2","SARS-CoV-2","CACATTATGAAAGATT",8,28.47,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","C61A D68G G155N T201R",4
"lib2","SARS-CoV-2","CACATTATTAAAACAT",3,40.34,10.42,-0.42,0.08,2.83,1.1,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","CACATTCAAACCATGC",14,220.86,10.84,0,0.06,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","CACATTCAACATGCGA",4,33.9,10.51,-0.33,0.07,2.96,1.04,0,">1 nonsynonymous","P7H K114S",2
"lib2","SARS-CoV-2","CACATTCAGCAAGGTT",4,20.04,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G9V A14P I88N",3
"lib2","SARS-CoV-2","CACATTCATTGACGAT",2,9.7,6.8,-4.04,0.34,1.96,1.12,0.02,">1 nonsynonymous","F12Y F99A A105S A145V",4
"lib2","SARS-CoV-2","CACATTCCAATAGAAA",6,148.85,9.09,-1.75,0.05,2.83,1.04,0,">1 nonsynonymous","R27Y Y119T K128P I138V G152D",5
"lib2","SARS-CoV-2","CACATTCCCCAATAGG",7,11.43,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","I72Y",1
"lib2","SARS-CoV-2","CACATTCGATGTTTAA",4,42.12,10.74,-0.1,0.05,2.84,1.14,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","CACATTCGCACCCATA",2,43.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9P A42E L131S G166E",4
"lib2","SARS-CoV-2","CACATTCGGATGCAAA",6,47.21,10.78,-0.06,0.05,2.91,1.06,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","CACATTCTAAAAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","S53L D68* R73A R136V Q144G T201E",6
"lib2","SARS-CoV-2","CACATTCTAACAAATA",2,33.32,7.52,-3.32,0.28,1.5,1,0.04,">1 nonsynonymous","A14T K56A N64S E76G N107T Q144N",6
"lib2","SARS-CoV-2","CACATTGATACAATGG",16,192.39,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","F167E",1
"lib2","SARS-CoV-2","CACATTGCAAGGATTA",2,17.55,10.36,-0.48,0.06,2.87,1.16,0,">1 nonsynonymous","K87V E141A",2
"lib2","SARS-CoV-2","CACATTGCAGGTTAGT",6,98.79,10.8,-0.04,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CACATTGGAATACAAA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","T3* Y91S D112H",3
"lib2","SARS-CoV-2","CACATTGTATATTCGA",1,9.32,NA,NA,NA,NA,NA,0.56,">1 nonsynonymous","E10V Y93L N107W Y121T G172S T201V",6
"lib2","SARS-CoV-2","CACATTGTTGACCCGG",4,11.64,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L95G N107S G116S F126P T170L",5
"lib2","SARS-CoV-2","CACATTTAAGGCTAGG",6,8.17,NA,NA,NA,NA,NA,NA,"stop","Y35* I138Y G155K",3
"lib2","SARS-CoV-2","CACATTTACATACGAT",3,15.94,9.73,-1.11,0.12,1.93,1.05,0.01,">1 nonsynonymous","T15I K26S C61I V173N",4
"lib2","SARS-CoV-2","CACATTTAGACTCCGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y I142F",2
"lib2","SARS-CoV-2","CACATTTATCAAAGTA",6,21.84,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14H R127F K198T",3
"lib2","SARS-CoV-2","CACATTTCCTACAGCC",1,17.79,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","D68G I104W N157H",3
"lib2","SARS-CoV-2","CACATTTTACATTCCT",1,54.88,10.25,-0.58,0.08,2.73,1.08,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","CACCAAAATGTACCTT",2,55.91,10.79,-0.04,0.06,2.89,1.12,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","CACCAAAATTAATGGT",3,43.42,10.75,-0.08,0.04,2.96,1.04,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","CACCAAAATTTGCCAA",7,25.28,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","A14V V20Q N64K D97W S139N L162T",6
"lib2","SARS-CoV-2","CACCAAACAATTATTA",6,292.69,9.01,-1.83,0.07,2.62,1.11,0,">1 nonsynonymous","Y39T N130H S164G Q176M",4
"lib2","SARS-CoV-2","CACCAAACATTTTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14H G86S K94I C102* K114F K128P",6
"lib2","SARS-CoV-2","CACCAAACGAAGCTCA",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69V E154Y T170W",3
"lib2","SARS-CoV-2","CACCAAAGAAATACAG",15,313.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S147G C158F Y178F",3
"lib2","SARS-CoV-2","CACCAAAGACGACATG",10,4.79,NA,NA,NA,NA,NA,NA,"stop","V32P P54G D59H S113L Y123* E141R G146F S164L Y175I",9
"lib2","SARS-CoV-2","CACCAAAGAGTAACCT",1,28.29,10.76,-0.07,0.07,2.82,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCAAAGGACGGTTC",7,16.25,NA,NA,NA,NA,NA,NA,"stop","N24* L38M I104G",3
"lib2","SARS-CoV-2","CACCAAATAAAATAAA",13,290.4,9.09,-1.75,0.05,2.64,1.08,0,">1 nonsynonymous","C49F F156S",2
"lib2","SARS-CoV-2","CACCAAATTACTATGA",2,1.09,NA,NA,NA,NA,NA,NA,"stop","V11I S53P P96* I104Y N171K",5
"lib2","SARS-CoV-2","CACCAACAAATCCATA",10,97.44,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N40L D90G N107L",3
"lib2","SARS-CoV-2","CACCAACATTCTGTAT",6,100.24,10.88,0.04,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCAACCCGGCTAAA",7,11.33,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","D34N S69R G101F",3
"lib2","SARS-CoV-2","CACCAACCGTAGTTTA",5,87.39,9.07,-1.77,0.13,1.54,1.09,0.01,">1 nonsynonymous","V37A T55G F62N Y91L D98V F134Y P191R",7
"lib2","SARS-CoV-2","CACCAACCTACAAGAT",1,36.93,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S41R T85E G172V",3
"lib2","SARS-CoV-2","CACCAACCTGTGTAAC",14,207.49,9.66,-1.18,0.05,2.73,1.09,0,">1 nonsynonymous","T15V K87L I142T T201S",4
"lib2","SARS-CoV-2","CACCAACGCCTCAAAG",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17C N107A",2
"lib2","SARS-CoV-2","CACCAACGTGTAAAAA",13,169.77,8.09,-2.75,0.11,1.5,1.12,0,">1 nonsynonymous","A89Y D98N N118Y",3
"lib2","SARS-CoV-2","CACCAACTAATGAGTA",2,23.71,8.36,-2.48,0.22,2.15,1.07,0.02,">1 nonsynonymous","N58L Y121H T170L S200L",4
"lib2","SARS-CoV-2","CACCAACTATCTCAAG",5,53.22,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","P7Q N30G I88N I104L G152C",5
"lib2","SARS-CoV-2","CACCAACTCTACGTCA",4,49.45,9.83,-1.01,0.05,2.91,1.02,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","CACCAACTGACAAAAA",1,17.8,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I2K D112P E141D T201M",4
"lib2","SARS-CoV-2","CACCAACTTTGAAAAT",5,3.14,NA,NA,NA,NA,NA,NA,"stop","T46K I88* L95A R136T",4
"lib2","SARS-CoV-2","CACCAAGAATCGAAAA",5,84.14,7.31,-3.53,0.13,1.91,1.17,0,">1 nonsynonymous","C61M R78N Y123L E135M L162M",5
"lib2","SARS-CoV-2","CACCAAGATACTATAT",3,12.13,10.54,-0.3,0.1,2.87,1.13,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","CACCAAGCCTTAAAAT",1,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43G L60K D90Y G172R",4
"lib2","SARS-CoV-2","CACCAAGGGTTAACGT",7,89.53,9.1,-1.74,0.12,1.61,1.08,0,">1 nonsynonymous","P7A S36L S139L S164Y",4
"lib2","SARS-CoV-2","CACCAAGTCAAGTACA",2,22.54,9.05,-1.78,0.11,2.84,1.09,0.01,">1 nonsynonymous","I28M Y119C",2
"lib2","SARS-CoV-2","CACCAATAAGCCCTCC",3,43.39,7.37,-3.46,0.32,1.5,1.06,0.04,">1 nonsynonymous","K94E V173Y",2
"lib2","SARS-CoV-2","CACCAATAAGTTCGTG",3,13.5,10.89,0.05,0.1,3,1.02,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","CACCAATAATAAAAAA",9,47.94,6.82,-4.01,0.17,1.5,1.11,0.01,">1 nonsynonymous","L5W T46I P161M A192T",4
"lib2","SARS-CoV-2","CACCAATACAGCAAAG",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","CACCAATAGGACCAAT",1,11.92,10.43,-0.41,0.07,2.93,1.07,0,">1 nonsynonymous","T15N S29R A42S",3
"lib2","SARS-CoV-2","CACCAATAGTATGCGT",3,56.57,10.05,-0.78,0.07,2.83,1,0,">1 nonsynonymous","A33R V173N",2
"lib2","SARS-CoV-2","CACCAATAGTGTCTCA",3,74.58,6.27,-4.57,0.67,1.5,1.22,0.02,">1 nonsynonymous","Y39R D90Y N120W E135L",4
"lib2","SARS-CoV-2","CACCAATCAACAAGAT",5,0.37,NA,NA,NA,NA,NA,NA,"stop","N40A Y93*",2
"lib2","SARS-CoV-2","CACCAATCATCCACTT",1,22.43,10.72,-0.11,0.05,2.8,1.18,0,">1 nonsynonymous","A14R S139T P197S",3
"lib2","SARS-CoV-2","CACCAATGAAGATCAT",6,12.06,6.21,-4.62,2,1.5,1.09,0.02,">1 nonsynonymous","L5S W23E C61T S147Y F167Y",5
"lib2","SARS-CoV-2","CACCAATGCGCATATG",6,50.99,8.13,-2.7,0.23,1.69,1.08,0.02,">1 nonsynonymous","G9R R25S Y143V S184T",4
"lib2","SARS-CoV-2","CACCAATTAAAATCTA",2,1.13,NA,NA,NA,NA,NA,NA,"stop","F12L A81* N109C P161G",4
"lib2","SARS-CoV-2","CACCAATTCACAATTG",11,149.02,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","K87R D90N S113D Y121S T170A K199R",6
"lib2","SARS-CoV-2","CACCAATTCGACTTTC",6,60.33,8.61,-2.22,0.07,2.59,1.08,0,">1 nonsynonymous","E10R Y35M K128A G146Q",4
"lib2","SARS-CoV-2","CACCACAAAACTGTCT",9,101.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99R N157T",2
"lib2","SARS-CoV-2","CACCACAAATTTACTA",3,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L S129F A145N",3
"lib2","SARS-CoV-2","CACCACAACTTCGCGA",9,140.57,8.22,-2.62,0.14,1.85,1.1,0.01,">1 nonsynonymous","S41D G101A Y119S T140L P197I",5
"lib2","SARS-CoV-2","CACCACAAGACCTCCC",2,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V D112E P133T",3
"lib2","SARS-CoV-2","CACCACAATACTAGTA",4,46.5,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","D90V G101A R127N",3
"lib2","SARS-CoV-2","CACCACACAGTGCATA",4,71.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2S Y35W N64L F70H G146L N151S",6
"lib2","SARS-CoV-2","CACCACACGCACACGC",14,223.94,10.46,-0.38,0.05,2.86,1.02,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","CACCACAGTTTGACAG",2,48.26,9.4,-1.44,0.09,2.76,1.1,0,">1 nonsynonymous","P7L G174W",2
"lib2","SARS-CoV-2","CACCACATGCCTGAAG",2,6.47,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I88G G146N",2
"lib2","SARS-CoV-2","CACCACATGTGTACAT",3,42.1,6.57,-4.27,0.55,1.5,1.14,0.03,">1 nonsynonymous","I2S A14F N110K P161T",4
"lib2","SARS-CoV-2","CACCACATTATGCCCT",6,128.71,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G9R N157R Q163F G172L",4
"lib2","SARS-CoV-2","CACCACCAGACGTTCA",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M P169R",2
"lib2","SARS-CoV-2","CACCACCAGAGATGAG",3,48.12,8.68,-2.15,0.14,2.77,1.08,0.01,">1 nonsynonymous","I2S A42T K48T Y119M",4
"lib2","SARS-CoV-2","CACCACCGATCCAATG",1,24.2,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N58R G146L Q176S",3
"lib2","SARS-CoV-2","CACCACGACCTGATAT",4,52.21,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2T K56L F99G",3
"lib2","SARS-CoV-2","CACCACGACTAATGGA",1,41.84,10.61,-0.23,0.06,2.88,1.13,0,">1 nonsynonymous","L57I S139T",2
"lib2","SARS-CoV-2","CACCACGAGCCAATAG",4,68.92,8.99,-1.84,0.05,2.99,1.04,0,">1 nonsynonymous","T3V N120P T148V",3
"lib2","SARS-CoV-2","CACCACGATGTGAACT",2,29.79,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","F70W",1
"lib2","SARS-CoV-2","CACCACGCCCTAACCA",3,79.29,10.61,-0.23,0.05,2.89,1.12,0,"1 nonsynonymous","E154N",1
"lib2","SARS-CoV-2","CACCACGCTGACGGTC",2,46.3,9.78,-1.05,0.07,2.41,1.1,0,">1 nonsynonymous","N4Y D34G",2
"lib2","SARS-CoV-2","CACCACGGCTCTCCTA",7,4.75,NA,NA,NA,NA,NA,NA,"stop","I2A G9* I72T",3
"lib2","SARS-CoV-2","CACCACTAATCCTAGA",2,54.19,9.61,-1.22,0.05,2.94,1.03,0,">1 nonsynonymous","V37E G152C T170A",3
"lib2","SARS-CoV-2","CACCACTAGGCAAAAT",4,65.43,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I2S S41G F70L L122S I142T C158V",6
"lib2","SARS-CoV-2","CACCACTCCATTAGTA",1,39.97,10.81,-0.02,0.08,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCACTCTACTGATA",3,30.19,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A81T K128I E141G G155F A192E",5
"lib2","SARS-CoV-2","CACCACTGAACACGCG",4,49.62,8.47,-2.37,0.14,1.73,1.06,0.01,">1 nonsynonymous","P54K G86L",2
"lib2","SARS-CoV-2","CACCACTGCTATTGGA",7,316.24,10.74,-0.1,0.03,2.96,1.05,0,">1 nonsynonymous","V32R N130G",2
"lib2","SARS-CoV-2","CACCACTGGCAGCCGC",6,30.86,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A22G I28L V37E A67R G116Y V182E",6
"lib2","SARS-CoV-2","CACCACTTTACTGGTT",7,39.35,10.85,0.01,0.04,2.83,1.12,0,">1 nonsynonymous","A42P G83F E154K",3
"lib2","SARS-CoV-2","CACCAGAAATAACTCT",10,17.17,6,-4.84,1,3,1.1,0,">1 nonsynonymous","F47L D68V D98I P161Y",4
"lib2","SARS-CoV-2","CACCAGAACCAAATCT",3,19.35,9.6,-1.24,0.15,1.88,1.09,0.01,">1 nonsynonymous","S29C E76S",2
"lib2","SARS-CoV-2","CACCAGACGTACTACA",3,30.46,8.19,-2.65,0.09,1.66,1.05,0,">1 nonsynonymous","S36N K48T Q84L S129C E154C",5
"lib2","SARS-CoV-2","CACCAGAGCGCTAAAA",5,85.58,9.44,-1.4,0.08,2.87,1.11,0,">1 nonsynonymous","L38I Y119T",2
"lib2","SARS-CoV-2","CACCAGATCATTTGTA",9,278.7,10.54,-0.3,0.05,2.9,1.09,0,">1 nonsynonymous","G9K T15L N130S",3
"lib2","SARS-CoV-2","CACCAGCAAAAAATAT",2,7.94,7.07,-3.77,0.39,1.5,1.04,0.03,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","CACCAGCAAATTATTA",12,220.87,10.76,-0.07,0.03,2.98,1.03,0,">1 nonsynonymous","K48A T201N",2
"lib2","SARS-CoV-2","CACCAGCCGAGTTTAA",12,2.13,NA,NA,NA,NA,NA,NA,"stop","C61E A81L P149*",3
"lib2","SARS-CoV-2","CACCAGCGGGACTGAA",7,87.45,6.07,-4.77,1.23,1.5,1.19,0.03,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","CACCAGCTTATCGAAA",2,38.68,6.06,-4.77,0.56,1.5,1.05,0.01,">1 nonsynonymous","N30C C158R",2
"lib2","SARS-CoV-2","CACCAGGATCAAGCCG",1,5.63,10.33,-0.51,0.16,2.77,1,0.01,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","CACCAGTATTCGCAAG",1,5.63,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F44Y I80T W106V N120S",4
"lib2","SARS-CoV-2","CACCAGTCACCAACGT",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I E76W K94S",3
"lib2","SARS-CoV-2","CACCAGTGAGACAAAT",1,10.09,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","D68T F99V E141D F156S G166W",5
"lib2","SARS-CoV-2","CACCAGTGATTTAGGT",4,66.8,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5D K87R G116Y R124M L162F",5
"lib2","SARS-CoV-2","CACCAGTGTATTTATA",1,98.18,10.3,-0.54,0.03,2.95,1.01,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","CACCAGTTGTTCTCAC",9,2.3,NA,NA,NA,NA,NA,NA,"stop","K56S P149* Q168H",3
"lib2","SARS-CoV-2","CACCAGTTTTGCCTCA",6,43.2,8.16,-2.68,0.17,1.5,1.06,0.01,">1 nonsynonymous","C6N V11N S41R D97H",4
"lib2","SARS-CoV-2","CACCATAAAAACAGTG",12,109.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9I G152P R179M",3
"lib2","SARS-CoV-2","CACCATAAAAACGAAG",2,41.19,10.53,-0.31,0.05,2.9,1.11,0,"1 nonsynonymous","E135H",1
"lib2","SARS-CoV-2","CACCATAAGTGAATAA",6,1.79,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","CACCATAAGTTTTTTG",4,15.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4V K26E Y91R S184E P197A",5
"lib2","SARS-CoV-2","CACCATACCACTCGCA",11,33.97,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F8T R27T P161C P169A",4
"lib2","SARS-CoV-2","CACCATACCTGATATA",1,20.53,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Q84L T85M C102T N107L",4
"lib2","SARS-CoV-2","CACCATAGAAACATTA",6,80.57,10.54,-0.3,0.04,2.94,1.05,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","CACCATAGAACCACTG",2,32.14,9.74,-1.1,0.11,2.15,1.06,0.01,">1 nonsynonymous","V65E T201V",2
"lib2","SARS-CoV-2","CACCATATAAGGATGG",11,180.98,9.88,-0.96,0.04,2.92,1.06,0,">1 nonsynonymous","P169C P197R",2
"lib2","SARS-CoV-2","CACCATATACAATAAA",7,89.07,10.56,-0.27,0.05,3,1.01,0,">1 nonsynonymous","T15D Y39G",2
"lib2","SARS-CoV-2","CACCATATCAACAAAA",3,78.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K48L Q84H A105I V153A C158S Y178I",6
"lib2","SARS-CoV-2","CACCATATGAGGTGTT",2,8.12,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","P177K E186S S200R",3
"lib2","SARS-CoV-2","CACCATATTAAACCCT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K N157F A192Q",3
"lib2","SARS-CoV-2","CACCATCAAACGAGGC",2,33.5,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y35P D97Y Y143R Y165S",4
"lib2","SARS-CoV-2","CACCATCAACTTAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L V103K G116N",3
"lib2","SARS-CoV-2","CACCATCAATGGTCCT",12,21.39,6,-4.84,2,3,1.3,0.02,">1 nonsynonymous","G83S D137L",2
"lib2","SARS-CoV-2","CACCATCGATTCTCAT",2,49.13,10.01,-0.82,0.08,2.95,1.06,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","CACCATCGGATCCACG",5,32.06,9.08,-1.75,0.08,2.8,1.17,0,">1 nonsynonymous","I142S F156W",2
"lib2","SARS-CoV-2","CACCATCGTAACTCAG",6,51.4,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C61M D90Q C150A",3
"lib2","SARS-CoV-2","CACCATCTAATAACAT",3,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G A81S G86V",3
"lib2","SARS-CoV-2","CACCATCTCCAGCAGT",4,42.58,6,-4.84,1.32,1.5,1.16,0.01,">1 nonsynonymous","R25A F62N K114N T201L",4
"lib2","SARS-CoV-2","CACCATCTCTGGGCAA",6,3.07,NA,NA,NA,NA,NA,NA,"stop","P96H C102* Q163V",3
"lib2","SARS-CoV-2","CACCATCTGACAAATG",1,50.63,9.03,-1.8,0.19,1.6,1.04,0.02,">1 nonsynonymous","V11P Y39D F160V",3
"lib2","SARS-CoV-2","CACCATGAAATACCTG",5,46.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11N K56A G83V G172R L187C",5
"lib2","SARS-CoV-2","CACCATGCCCCCCCTT",2,26.52,10.31,-0.52,0.08,2.92,1.01,0,">1 nonsynonymous","I28W D98W S129Y",3
"lib2","SARS-CoV-2","CACCATGCTGGACTCA",14,1.22,NA,NA,NA,NA,NA,NA,"stop","R25W Y39K T46I G86R P96T N110I S129A E186*",8
"lib2","SARS-CoV-2","CACCATGGTGCCAATA",5,47.02,6.33,-4.5,0.58,1.5,1.17,0.02,">1 nonsynonymous","C6D Y39L K48L A105V",4
"lib2","SARS-CoV-2","CACCATTAATACAATT",6,21.48,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V103G",1
"lib2","SARS-CoV-2","CACCATTAGAAAACTG",19,193.6,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68I T100Y T140M",3
"lib2","SARS-CoV-2","CACCATTAGGCGTATT",3,18.45,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I28M K48L Y66E A89V",4
"lib2","SARS-CoV-2","CACCATTCATTACTGA",1,14.98,10.97,0.13,0.09,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCATTCTGCGGTAG",8,148.86,8.26,-2.58,0.12,1.84,1.06,0.01,"1 nonsynonymous","R179V",1
"lib2","SARS-CoV-2","CACCATTCTTCGATAT",1,26.85,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","T15S S36V A42D Y50H Y66S P149Q",6
"lib2","SARS-CoV-2","CACCATTGACGAACGG",3,25.39,10.55,-0.29,0.06,2.91,1.12,0,">1 nonsynonymous","N4T G9S E141K T148S K199N",5
"lib2","SARS-CoV-2","CACCATTGAGTACCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* D59R Y91S",3
"lib2","SARS-CoV-2","CACCATTGATCTAAGC",1,8.9,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","G83I N92S Y143L",3
"lib2","SARS-CoV-2","CACCATTGTATGTGGA",2,31.74,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I2L P54E Y119L N157F",4
"lib2","SARS-CoV-2","CACCATTTCTCTGTAG",5,26.67,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7F S43V D68L G152H",4
"lib2","SARS-CoV-2","CACCCAAAAGATGCTG",3,10.99,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R16S G51D K94L",3
"lib2","SARS-CoV-2","CACCCAAAAGCGCCAA",1,9.6,8.66,-2.18,0.13,1.96,1.05,0.01,">1 nonsynonymous","V77R Y91L",2
"lib2","SARS-CoV-2","CACCCAAACGAATTGA",4,86.05,10.82,-0.02,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCAAAGCGCAAAC",1,7.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23A D75E",2
"lib2","SARS-CoV-2","CACCCAAAGGAATTTA",17,163.26,10.9,0.06,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCAACAAATGGCA",13,3.12,NA,NA,NA,NA,NA,NA,"stop","W23* N40* C61M",3
"lib2","SARS-CoV-2","CACCCAACGAATCTCT",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y V103S S184C",3
"lib2","SARS-CoV-2","CACCCAACGCTGTATG",5,1.1,NA,NA,NA,NA,NA,NA,"stop","F8* T148K",2
"lib2","SARS-CoV-2","CACCCAACTAATTCTG",16,103.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A42T V77K C102I P133V",4
"lib2","SARS-CoV-2","CACCCAACTGCCACAG",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Y Q163N",2
"lib2","SARS-CoV-2","CACCCAATAGAACAGT",11,100.4,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F8S F12T D97N G146C V180I",5
"lib2","SARS-CoV-2","CACCCACACCTTATTT",3,29.58,10.8,-0.03,0.06,2.82,1.17,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","CACCCACACGATTTAA",3,80.62,8.7,-2.14,0.1,2.08,1.08,0,">1 nonsynonymous","C49Y G174E",2
"lib2","SARS-CoV-2","CACCCACCATGACAAA",2,47.34,7.99,-2.84,0.13,1.83,1.07,0.01,">1 nonsynonymous","V11P A42C Y119S",3
"lib2","SARS-CoV-2","CACCCACCGTATTAAG",6,17.58,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C49G P133L",2
"lib2","SARS-CoV-2","CACCCACCTCCAATAA",8,177.62,10.86,0.02,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCACGAGTGATAA",3,53.52,10.36,-0.47,0.04,2.86,1.12,0,">1 nonsynonymous","E10K D90S",2
"lib2","SARS-CoV-2","CACCCACGTTTTATGT",12,210.16,9.41,-1.43,0.05,2.82,1.12,0,">1 nonsynonymous","V37Y L60P L125Q G196D",4
"lib2","SARS-CoV-2","CACCCACTAAATGATG",12,88.18,9.78,-1.06,0.04,2.7,1.03,0,">1 nonsynonymous","Q79K L122C",2
"lib2","SARS-CoV-2","CACCCAGAACCAAAGG",3,1.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19F",1
"lib2","SARS-CoV-2","CACCCAGAATGGAGTG",2,16.08,6,-4.84,0.9,3,1.15,0.01,">1 nonsynonymous","L38M T46D G146W Q176L",4
"lib2","SARS-CoV-2","CACCCAGCGCCCATCG",3,24.07,9.86,-0.97,0.17,1.93,1.25,0.02,"1 nonsynonymous","L162Y",1
"lib2","SARS-CoV-2","CACCCATACTACAAAG",8,4.36,NA,NA,NA,NA,NA,NA,"stop","G74V L95* Y143L",3
"lib2","SARS-CoV-2","CACCCATATCGGCACT",3,0.85,NA,NA,NA,NA,NA,NA,"stop","Y39* Y91V S108D",3
"lib2","SARS-CoV-2","CACCCATGCAACATAA",1,9.65,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","G116R Y143G C158V V180L",4
"lib2","SARS-CoV-2","CACCCATTACACAGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R D68R T85L W106M N157F",5
"lib2","SARS-CoV-2","CACCCATTCACTTTAC",5,31.44,10.2,-0.64,0.06,2.82,1.14,0,">1 nonsynonymous","P54L K56S Y123T T201R",4
"lib2","SARS-CoV-2","CACCCCAAAAGTTACT",3,40.52,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","I88T P96D T140Q C150R R179M",5
"lib2","SARS-CoV-2","CACCCCAAAATGATCC",8,120.5,10.2,-0.64,0.03,2.78,1.02,0,">1 nonsynonymous","T3H F44P K87R",3
"lib2","SARS-CoV-2","CACCCCAACCTTGGTC",2,55.24,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F12S G86K F134T",3
"lib2","SARS-CoV-2","CACCCCAAGAGCCACG",5,0.13,NA,NA,NA,NA,NA,NA,"stop","E10* D98A",2
"lib2","SARS-CoV-2","CACCCCAATGTGTACG",4,25,10.72,-0.11,0.05,3,1.02,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CACCCCACAGAACAAT",2,25.89,9.32,-1.51,0.16,1.79,1.06,0.02,">1 nonsynonymous","K48V E135Y S147Y",3
"lib2","SARS-CoV-2","CACCCCACAGTAATAA",1,22.17,10.35,-0.48,0.06,2.93,1.09,0,"1 nonsynonymous","D34E",1
"lib2","SARS-CoV-2","CACCCCACCCGCCATC",4,33.3,8.25,-2.59,0.09,2.61,1.06,0,">1 nonsynonymous","D98S S113M",2
"lib2","SARS-CoV-2","CACCCCACTGAGAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","CACCCCAGAGATATTG",2,22.94,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14T G101A R179H",3
"lib2","SARS-CoV-2","CACCCCAGCCACAACA",4,18.61,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","Y119I G152L P161L",3
"lib2","SARS-CoV-2","CACCCCCATCAACATA",4,132.3,10.26,-0.57,0.03,2.87,1.07,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","CACCCCCCCACTGACC",2,12.43,10.77,-0.06,0.05,2.97,1.01,0,">1 nonsynonymous","N40T P149S",2
"lib2","SARS-CoV-2","CACCCCCGTACAGTCC",8,62.09,6.29,-4.55,0.66,1.5,1.12,0.02,">1 nonsynonymous","S45Y R124M N157Y",3
"lib2","SARS-CoV-2","CACCCCCTCAACCCCA",8,0.82,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CACCCCCTGGCACCAA",5,67.08,10.47,-0.36,0.05,2.87,1.09,0,">1 nonsynonymous","F44S T140S L188D",3
"lib2","SARS-CoV-2","CACCCCGTCCAAACGC",5,68.6,10.71,-0.13,0.04,2.91,1.09,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","CACCCCTAGTAAGTAA",5,22.5,6,-4.84,2,1.62,1.22,0.02,">1 nonsynonymous","A89S L95K I138D",3
"lib2","SARS-CoV-2","CACCCCTCGTCTAAGT",10,155.34,10.73,-0.11,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCCTTACAGATGT",16,54.76,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L38F C49I D98M",3
"lib2","SARS-CoV-2","CACCCCTTGATGGCGC",6,46.37,7.34,-3.5,0.27,1.5,1.12,0.02,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","CACCCGAATGGAGGAG",8,92.65,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T55L K87D G172I",3
"lib2","SARS-CoV-2","CACCCGAGTCCGCGTA",5,0.47,NA,NA,NA,NA,NA,NA,"stop","Y50H C150N Q176*",3
"lib2","SARS-CoV-2","CACCCGCCAGGCCACA",14,137.2,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P161R T170L",2
"lib2","SARS-CoV-2","CACCCGCTATATAAGT",6,75.46,8.42,-2.41,0.11,2.53,1.04,0.01,">1 nonsynonymous","I2T F44D N64K Y119L",4
"lib2","SARS-CoV-2","CACCCGGAAAATCGCC",4,32.36,10.86,0.03,0.08,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCGGAAACACGGT",8,101.27,6,-4.84,0.98,1.5,1.29,0.01,">1 nonsynonymous","C6P N40W G101T T170K",4
"lib2","SARS-CoV-2","CACCCGGATACCCAAA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","I2F D34G I72H T85N K132* T140R S184Y",7
"lib2","SARS-CoV-2","CACCCGGCGCAGTACT",6,32.62,6.12,-4.72,1.09,1.5,1.12,0.04,">1 nonsynonymous","P82S Y119T",2
"lib2","SARS-CoV-2","CACCCGGTCTAATACG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C31* A105P",2
"lib2","SARS-CoV-2","CACCCGTACGAAACAT",3,28.32,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5Q Y39V Y93R",3
"lib2","SARS-CoV-2","CACCCGTGAGTAACCG",1,30.45,10.95,0.11,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCTAAATATTCGC",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I D137Y",2
"lib2","SARS-CoV-2","CACCCTAAGTAAAAAA",3,57.02,10.81,-0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCCTAATGTCTTGA",1,44.08,10.64,-0.19,0.06,2.9,1.07,0,">1 nonsynonymous","S53R G83Q Q168W",3
"lib2","SARS-CoV-2","CACCCTACACGCCAAG",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8E T15L Q84W D137T S164N",5
"lib2","SARS-CoV-2","CACCCTACATCTAACA",3,38.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P L38H D98Y D137R",4
"lib2","SARS-CoV-2","CACCCTACTAGCCGAT",3,30.56,9.83,-1.01,0.06,2.88,1.12,0,">1 nonsynonymous","N4Q T55I N110A N118T",4
"lib2","SARS-CoV-2","CACCCTAGGATTCCAG",4,81,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6V A14N Y119T N157V",4
"lib2","SARS-CoV-2","CACCCTAGTACCACAG",7,77.45,10.64,-0.2,0.05,2.89,1.12,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","CACCCTATAAATTAGA",3,10.19,8.96,-1.87,0.22,1.91,1.09,0.02,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","CACCCTATATGAGACC",5,69.66,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","L38A C61G D112S G172C P197N",5
"lib2","SARS-CoV-2","CACCCTCAATGATGAA",8,0,NA,NA,NA,NA,NA,NA,"stop","W23* G117M S139R",3
"lib2","SARS-CoV-2","CACCCTCATCAGGGCC",3,1.13,NA,NA,NA,NA,NA,NA,"stop","A22T K94* K132S",3
"lib2","SARS-CoV-2","CACCCTCCCCGGTTAT",11,67.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A67S K87E Y93C D97V L122V G174R",6
"lib2","SARS-CoV-2","CACCCTCCGTAAAACA",5,62.78,10.82,-0.02,0.08,2.91,1.08,0,"1 nonsynonymous","S139A",1
"lib2","SARS-CoV-2","CACCCTCTGATAGCTA",4,72.24,9.26,-1.58,0.1,1.9,1.07,0,">1 nonsynonymous","G51M F62T G116V",3
"lib2","SARS-CoV-2","CACCCTCTTAGAACTG",12,258.99,10.79,-0.05,0.03,2.92,1.08,0,">1 nonsynonymous","G9A S43A",2
"lib2","SARS-CoV-2","CACCCTCTTATGTATG",4,82.64,10.69,-0.15,0.04,2.89,1.08,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","CACCCTGATATTCAAT",6,26.42,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A14Q A67R L95N",3
"lib2","SARS-CoV-2","CACCCTGCAGGAGATA",7,0.81,NA,NA,NA,NA,NA,NA,"stop","R25L D75R D97F N109* S139M A190T",6
"lib2","SARS-CoV-2","CACCCTGTCACGGTCG",3,13.22,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V20R N92Q S113V",3
"lib2","SARS-CoV-2","CACCCTTACAAGCAAA",2,18.77,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42I I72Y D90T",3
"lib2","SARS-CoV-2","CACCCTTCGCACCTGC",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87T Y119W G146R S164Q",4
"lib2","SARS-CoV-2","CACCCTTGTGTGTGCG",11,31.3,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L5Q C6F A67T Y165W",4
"lib2","SARS-CoV-2","CACCCTTTTGTATAGA",3,40.52,9.94,-0.89,0.13,2.21,1.06,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","CACCGAAAACAATAAT",3,14.47,10.08,-0.76,0.11,2.33,1,0.01,">1 nonsynonymous","I28A D97V L131I",3
"lib2","SARS-CoV-2","CACCGAAAATAGGTCA",4,24.57,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T63R I80R I88K P96N",4
"lib2","SARS-CoV-2","CACCGAAATACCAACG",5,8.93,6,-4.84,2,3,1.33,0.03,">1 nonsynonymous","F99N N171H",2
"lib2","SARS-CoV-2","CACCGAAATTGTTCAA",3,43.47,10.3,-0.54,0.08,2.87,1.09,0,">1 nonsynonymous","D90H N120H",2
"lib2","SARS-CoV-2","CACCGAACACCAATAG",6,46.43,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","V180R",1
"lib2","SARS-CoV-2","CACCGAACATACTATT",14,59.51,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F17R K26T K94V S184E",4
"lib2","SARS-CoV-2","CACCGAACGCAATTGT",6,58.85,10.85,0.01,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCGAAGCATAGATA",2,54.72,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L57G Y143N",2
"lib2","SARS-CoV-2","CACCGAATAATTCATC",1,9.64,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","F12S A18I S53V Y119G P149R P161R",6
"lib2","SARS-CoV-2","CACCGAATAGAAATTT",7,88.62,10.68,-0.15,0.05,2.93,1.07,0,">1 nonsynonymous","N64P R78S",2
"lib2","SARS-CoV-2","CACCGAATGATCCCAA",6,29.12,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I88R K94I K114L E141A",4
"lib2","SARS-CoV-2","CACCGACAAAGTCTAT",15,106.82,6.44,-4.39,0.27,1.5,1.17,0.01,">1 nonsynonymous","D137L F160T",2
"lib2","SARS-CoV-2","CACCGACCAGGAGGGT",4,15.79,6.03,-4.81,0.56,3,1.19,0.01,">1 nonsynonymous","N4R Y35P G86Q",3
"lib2","SARS-CoV-2","CACCGACCTTTCTAGT",2,20.3,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G83H L95M E141K V181E",4
"lib2","SARS-CoV-2","CACCGACGAATGCAGA",2,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94Y R124E G155H G172I",4
"lib2","SARS-CoV-2","CACCGACTATAGTTAA",2,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T P149T N171F",3
"lib2","SARS-CoV-2","CACCGACTGTTCTGTT",4,45.57,10.62,-0.21,0.05,2.89,1.08,0,">1 nonsynonymous","F8I N151S",2
"lib2","SARS-CoV-2","CACCGACTTCAACTAA",5,79.55,9.97,-0.86,0.08,2.2,1.05,0,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","CACCGAGAAAGTACAT",1,22.42,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","C6Y N58G R127V",3
"lib2","SARS-CoV-2","CACCGAGAACACCAGA",8,207.58,8.75,-2.08,0.06,2.92,1.08,0,">1 nonsynonymous","N24H T100L F126R",3
"lib2","SARS-CoV-2","CACCGAGAATGCGACA",1,12.04,10.47,-0.37,0.09,2.86,1.13,0,">1 nonsynonymous","T15F L122R",2
"lib2","SARS-CoV-2","CACCGAGAGATATGTC",9,140.4,10.85,0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCGAGGAGCTGATT",6,56.4,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D98W A105W E135A P161N T170L",5
"lib2","SARS-CoV-2","CACCGATAAAATACAA",1,84.88,10.54,-0.3,0.05,2.96,1.04,0,">1 nonsynonymous","F12L V37L",2
"lib2","SARS-CoV-2","CACCGATAGTATCTAG",2,180.5,10.29,-0.55,0.02,2.84,1.05,0,"1 nonsynonymous","L57E",1
"lib2","SARS-CoV-2","CACCGATTAAACATCA",1,6.66,6,-4.84,2,3,1.12,0.04,">1 nonsynonymous","I72Q K87L K128R C158P R179S",5
"lib2","SARS-CoV-2","CACCGATTGGCACGTA",4,22.63,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D90R V103Q A190V G196E",4
"lib2","SARS-CoV-2","CACCGCAAACTTCTGC",6,268.49,10.16,-0.68,0.03,2.98,1.03,0,"1 nonsynonymous","E154V",1
"lib2","SARS-CoV-2","CACCGCACGGACATAA",4,101.99,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","D34R S45R Y66P G166P Y178A",5
"lib2","SARS-CoV-2","CACCGCACGTGTAAAC",4,81.73,10.83,-0.01,0.05,2.86,1.15,0,"1 nonsynonymous","Y39R",1
"lib2","SARS-CoV-2","CACCGCAGGATCTCAG",1,19.38,6.54,-4.29,0.64,1.5,1.06,0.06,">1 nonsynonymous","E10I V37T S45L D75P L187H",5
"lib2","SARS-CoV-2","CACCGCAGTATAGCGT",4,21.62,6,-4.84,2,2.75,1.22,0.01,">1 nonsynonymous","C6P G74I",2
"lib2","SARS-CoV-2","CACCGCATAATGGAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69L Y165D",2
"lib2","SARS-CoV-2","CACCGCATTAGCGGAC",5,58.89,9.74,-1.1,0.09,2.66,1,0,">1 nonsynonymous","D34Y G155S",2
"lib2","SARS-CoV-2","CACCGCCTAGGCACCA",4,18.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89V P96Q",2
"lib2","SARS-CoV-2","CACCGCGATATACACT",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Q T85F",2
"lib2","SARS-CoV-2","CACCGCTAGCAAAACT",5,101.99,10.87,0.03,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCGCTAGTGGTGAT",3,60.96,9.62,-1.22,0.04,2.96,1.07,0,">1 nonsynonymous","T170N K198R",2
"lib2","SARS-CoV-2","CACCGCTCTCGCGCTA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","P96R P197*",2
"lib2","SARS-CoV-2","CACCGCTTTTTCTCGA",7,67.83,10.8,-0.03,0.04,2.91,1.09,0,">1 nonsynonymous","A42E D59S",2
"lib2","SARS-CoV-2","CACCGGACATGGCTTC",5,68.76,10.84,0,0.04,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCGGAGAGTTTACC",20,163.57,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y39C Q79P",2
"lib2","SARS-CoV-2","CACCGGATAAACAAAC",3,0.65,NA,NA,NA,NA,NA,NA,"stop","I104F T140* F167R",3
"lib2","SARS-CoV-2","CACCGGATTGAAGCAC",1,50.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2V Y39N C61P V77P G83L A105D Y119C N151S",8
"lib2","SARS-CoV-2","CACCGGGCTATAGGAG",17,0.49,NA,NA,NA,NA,NA,NA,"stop","S43V D68*",2
"lib2","SARS-CoV-2","CACCGGTCGGGGCCGC",11,92.49,10.81,-0.02,0.06,3,1.03,0,">1 nonsynonymous","D90Q S147T",2
"lib2","SARS-CoV-2","CACCGGTTTTCCTTAG",5,13.45,9.31,-1.53,0.26,1.74,1.1,0.04,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","CACCGTAATACAAAGG",4,33.9,6,-4.84,2,3,1.16,0,">1 nonsynonymous","P82S R127N D137V G174W",4
"lib2","SARS-CoV-2","CACCGTACAAAGTGAT",6,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V D97A K114F",3
"lib2","SARS-CoV-2","CACCGTACTTAAGTTA",6,80.61,10.85,0.01,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCGTAGATACTGTC",2,6.83,10.7,-0.13,0.08,2.97,1.03,0,">1 nonsynonymous","P149M F156W S200Y",3
"lib2","SARS-CoV-2","CACCGTAGGAATCCAC",10,144.14,9.17,-1.67,0.09,1.92,1.08,0,">1 nonsynonymous","T55N R127L",2
"lib2","SARS-CoV-2","CACCGTATAACAGCTT",12,24.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15W R127L",2
"lib2","SARS-CoV-2","CACCGTATCAGCACAA",12,86.08,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39S V52S A81P",3
"lib2","SARS-CoV-2","CACCGTCATAATTTCC",5,17.84,10.83,-0.01,0.06,2.87,1.07,0,">1 nonsynonymous","T3A G196R",2
"lib2","SARS-CoV-2","CACCGTGATTAAAAGG",4,0.67,NA,NA,NA,NA,NA,NA,"stop","I2* D98Y Q163G",3
"lib2","SARS-CoV-2","CACCGTGCCTCCGCTT",1,13.43,9.88,-0.95,0.18,1.89,1.06,0.02,">1 nonsynonymous","C6R Y39V N120M Q168W",4
"lib2","SARS-CoV-2","CACCGTTCGCCTCCTG",16,215.99,8.48,-2.36,0.1,2.75,1.04,0,">1 nonsynonymous","S41I G83S F156Q Q168M",4
"lib2","SARS-CoV-2","CACCGTTCTACACTAG",8,1.27,NA,NA,NA,NA,NA,NA,"stop","S29L I104H Y121*",3
"lib2","SARS-CoV-2","CACCGTTGATCACTGC",2,18.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M Y165K",2
"lib2","SARS-CoV-2","CACCGTTTTATTACGA",4,49.6,10.71,-0.13,0.04,2.93,1.08,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","CACCTAAAAACCTACG",1,13.64,10.35,-0.48,0.22,2.54,1.1,0.02,">1 nonsynonymous","F134R S164K",2
"lib2","SARS-CoV-2","CACCTAACGCAACGAG",1,29.41,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","N4L Y50L Y165D",3
"lib2","SARS-CoV-2","CACCTAAGTGCGTTAA",3,60.83,8.43,-2.4,0.07,2.76,1.03,0,">1 nonsynonymous","T85M G117T F160T",3
"lib2","SARS-CoV-2","CACCTAATTAACTCAC",1,20.32,9.78,-1.06,0.18,2.46,1.04,0.01,">1 nonsynonymous","A22D A89V C195F T201Q",4
"lib2","SARS-CoV-2","CACCTAATTGTAACAT",4,56.19,10.43,-0.4,0.06,2.86,1,0,">1 nonsynonymous","T15Y S164Q",2
"lib2","SARS-CoV-2","CACCTAATTTCATCAA",1,39.04,10.86,0.02,0.04,2.88,1.11,0,"1 nonsynonymous","N30D",1
"lib2","SARS-CoV-2","CACCTACACCGTAACT",4,128.53,10.22,-0.62,0.04,2.92,1.01,0,">1 nonsynonymous","G174E K198L",2
"lib2","SARS-CoV-2","CACCTACACGATACAT",1,18.55,9.08,-1.76,0.06,2.96,1.07,0,">1 nonsynonymous","K26M Y119E",2
"lib2","SARS-CoV-2","CACCTACACTCGCGAA",8,133.31,10.82,-0.01,0.04,2.96,1.04,0,"1 nonsynonymous","V52F",1
"lib2","SARS-CoV-2","CACCTACAGAAAGAAA",1,5.56,10.04,-0.8,0.25,2.21,1,0.01,">1 nonsynonymous","C49F N64Q",2
"lib2","SARS-CoV-2","CACCTACCACACATCA",2,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P A105P L122D Y165D",4
"lib2","SARS-CoV-2","CACCTACCCTTTCTAT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","I2F D34A D59A R78H L95N G146* G155R",7
"lib2","SARS-CoV-2","CACCTACCGGTTAAAT",9,70.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10W A89V N107L Q176I A190F",5
"lib2","SARS-CoV-2","CACCTACCTAAGGCCA",16,214.12,6.72,-4.11,0.36,1.5,1.16,0.02,">1 nonsynonymous","R27L V37G R127E",3
"lib2","SARS-CoV-2","CACCTACGGCCGTAAT",4,75.01,10.57,-0.27,0.03,2.91,1,0,"1 nonsynonymous","N13T",1
"lib2","SARS-CoV-2","CACCTACGTCACGAAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","G9I T55V G86I D98* N107P N171R Q176K V181Q",8
"lib2","SARS-CoV-2","CACCTACGTTCTAGTA",4,15.17,6,-4.84,2,1.5,1.37,0.06,">1 nonsynonymous","D34Y K48Y P96L S200W",4
"lib2","SARS-CoV-2","CACCTACTACAAGAAT",1,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C T63M D112M",3
"lib2","SARS-CoV-2","CACCTACTTTATCACA",4,22.98,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V20L S41R A89N P161T G174P",5
"lib2","SARS-CoV-2","CACCTAGAAATATATA",5,66.32,7.54,-3.29,0.08,1.87,1.09,0,">1 nonsynonymous","G83H D90K P149I G155F",4
"lib2","SARS-CoV-2","CACCTAGACCAGACGC",16,103.7,6.12,-4.72,0.71,1.5,1.18,0.01,">1 nonsynonymous","S43L I88F I104R",3
"lib2","SARS-CoV-2","CACCTAGATCATGAAT",2,14.9,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D90M S129F C158L A192T",4
"lib2","SARS-CoV-2","CACCTAGCAATTGGAA",2,10.7,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","A33S G51L W106M",3
"lib2","SARS-CoV-2","CACCTAGGTATAAGAT",5,95.8,10.66,-0.17,0.08,2.78,1.08,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","CACCTAGTAAGACGTA",12,102.55,10.69,-0.15,0.06,2.87,1.11,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","CACCTAGTTAAAAGAT",2,14.55,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","S69R A89W S108P T170L",4
"lib2","SARS-CoV-2","CACCTATAAGACACCA",2,30.94,10.83,-0.01,0.09,2.86,1.17,0,"1 nonsynonymous","K198E",1
"lib2","SARS-CoV-2","CACCTATAGTTAACTA",3,23.96,10.85,0.01,0.06,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTATCGACTCGCA",6,132.92,10.86,0.02,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTATCGTTGACCA",15,4.22,NA,NA,NA,NA,NA,NA,"stop","R16K Y35H Q84T V103* Y143N T170C Q176I",7
"lib2","SARS-CoV-2","CACCTATGAAAGAATA",3,96.44,10.59,-0.24,0.11,2.67,1.01,0.01,"1 nonsynonymous","A18M",1
"lib2","SARS-CoV-2","CACCTATTGGTCAATA",3,27.96,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V103N N109Y Y119S S164W",4
"lib2","SARS-CoV-2","CACCTCAAAGGATGTT",3,37.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105T C158S V173L",3
"lib2","SARS-CoV-2","CACCTCACAAATGATA",2,9.96,10.9,0.07,0.13,2.78,1.25,0.01,"1 nonsynonymous","Q168W",1
"lib2","SARS-CoV-2","CACCTCATTTACTCTT",2,41.65,10.67,-0.16,0.06,2.92,1.09,0,">1 nonsynonymous","D97S C195S",2
"lib2","SARS-CoV-2","CACCTCCCATTACCGA",25,194.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6M Y91I Y121I",3
"lib2","SARS-CoV-2","CACCTCCCATTCCCAA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V S45M L60A T140G",4
"lib2","SARS-CoV-2","CACCTCCGGCGTGCGG",13,216.8,10.84,0.01,0.04,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTCGAGTAATACT",1,31.33,10.91,0.07,0.12,2.64,1.09,0.01,">1 nonsynonymous","I2M F12V T55A L122R",4
"lib2","SARS-CoV-2","CACCTCTAACATGACG",5,7.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15I V182S",2
"lib2","SARS-CoV-2","CACCTCTAGTTGTTCT",8,188.15,10.79,-0.04,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTCTCGGACTTAC",6,1.57,NA,NA,NA,NA,NA,NA,"stop","S36M N64T N171S K199*",4
"lib2","SARS-CoV-2","CACCTCTTACTACCTG",6,17.97,6.02,-4.81,1.72,1.5,1.2,0.06,">1 nonsynonymous","N13I L60V G155C T170S Y175C R179W",6
"lib2","SARS-CoV-2","CACCTCTTCAATACTG",10,121.69,9.96,-0.87,0.07,2.35,1.05,0,">1 nonsynonymous","R127A S147Y",2
"lib2","SARS-CoV-2","CACCTGAAATCTGTCT",1,29.42,6.21,-4.63,0.99,1.5,1.16,0.03,">1 nonsynonymous","I2S F62A V77M A81V D98L R179I K199W",7
"lib2","SARS-CoV-2","CACCTGAACTATCCAG",2,10.16,8.96,-1.87,0.38,2.51,1.06,0.04,">1 nonsynonymous","D90I N118G",2
"lib2","SARS-CoV-2","CACCTGATAGGTACTA",4,97.8,9.76,-1.08,0.04,2.89,1.07,0,">1 nonsynonymous","N109D K198L",2
"lib2","SARS-CoV-2","CACCTGCACAATTCTA",9,158.63,9.94,-0.89,0.06,2.52,1.06,0,">1 nonsynonymous","V32S F99Y",2
"lib2","SARS-CoV-2","CACCTGCCGTAGAATG",3,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A T85S",2
"lib2","SARS-CoV-2","CACCTGCTTACAAATA",11,72.46,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","D90T P96L F167G",3
"lib2","SARS-CoV-2","CACCTGCTTCGTCCTC",6,56.77,10.43,-0.4,0.04,2.92,1.05,0,">1 nonsynonymous","Y39T G51S",2
"lib2","SARS-CoV-2","CACCTGGTGACCGAAG",2,51.54,10.89,0.06,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTGTACACTGCTA",11,101.95,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","R25Y S113Q F160L",3
"lib2","SARS-CoV-2","CACCTGTGAAGAGAAT",9,59.53,8.37,-2.46,0.15,2.21,1.21,0.01,">1 nonsynonymous","D59G R73K Y143E",3
"lib2","SARS-CoV-2","CACCTGTTTGGAGTCT",5,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y D90P F99T K132E V173G",5
"lib2","SARS-CoV-2","CACCTTAAGAATCAGG",3,116.17,6,-4.84,1.07,1.5,1.14,0.01,">1 nonsynonymous","A14Y N107H S147L F167I",4
"lib2","SARS-CoV-2","CACCTTAGAGGACAGG",1,4.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N24L",1
"lib2","SARS-CoV-2","CACCTTAGTATAGAAA",6,29.99,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4V G9H K94G L122S Y159V",5
"lib2","SARS-CoV-2","CACCTTATAATTACAG",4,41.58,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","L95Q G146R",2
"lib2","SARS-CoV-2","CACCTTCACTCTTACA",2,75.11,10.38,-0.46,0.04,2.95,1,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","CACCTTCCAATACAAC",4,27.15,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T140S P149E F167S",3
"lib2","SARS-CoV-2","CACCTTCCAATTAAGG",12,138.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31K N64R G86T F99Y S129R R179I",6
"lib2","SARS-CoV-2","CACCTTCCCAAGAGTT",4,33.35,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17N V37I L38Y F156K P169S",5
"lib2","SARS-CoV-2","CACCTTCTTGCAAAGG",1,10.9,10.53,-0.3,0.12,2.86,1.14,0.01,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CACCTTGAAGTATCTT",9,259.36,10.41,-0.43,0.03,2.91,1.05,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","CACCTTGACCATTCTC",5,0,NA,NA,NA,NA,NA,NA,"stop","P82T T85* D90Y Y119T P149F T170Y",6
"lib2","SARS-CoV-2","CACCTTGCACGGGCAA",1,2.46,NA,NA,NA,NA,NA,NA,"stop","G9* S36G K87I T100I",4
"lib2","SARS-CoV-2","CACCTTGCAGAGGTAT",6,95.93,10.79,-0.05,0.04,2.96,1.06,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","CACCTTGCCCTGAATA",4,118.31,8.56,-2.28,0.11,2.75,1.15,0,">1 nonsynonymous","N30R C61I N157S K199F",4
"lib2","SARS-CoV-2","CACCTTGCTTCTAAAC",8,2.14,NA,NA,NA,NA,NA,NA,"stop","K87I F99D V103* Q176P",4
"lib2","SARS-CoV-2","CACCTTGGATATGTTC",3,100.94,10.81,-0.03,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CACCTTGGTAGATACG",4,0.92,NA,NA,NA,NA,NA,NA,"stop","I2A R25T D98* K128F",4
"lib2","SARS-CoV-2","CACCTTTGATTAACAA",2,18.74,10.07,-0.77,0.12,2.56,1.1,0.01,">1 nonsynonymous","S36L L57F",2
"lib2","SARS-CoV-2","CACCTTTTACGCACCG",3,28.79,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A14L D34A R73I G83S Y119A Y143A",6
"lib2","SARS-CoV-2","CACCTTTTCAACGTAG",12,1.63,NA,NA,NA,NA,NA,NA,"stop","P149Q G174* V182I H189N",4
"lib2","SARS-CoV-2","CACCTTTTGTAGCTCC",4,35.19,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y50P P82T Y119M P161F",4
"lib2","SARS-CoV-2","CACGAAAACAACCTAC",1,12.38,10.96,0.13,0.09,3,1.02,0,">1 nonsynonymous","S43T N64V",2
"lib2","SARS-CoV-2","CACGAAAAGTAAATAA",3,0.21,NA,NA,NA,NA,NA,NA,"stop","G51Q Y165*",2
"lib2","SARS-CoV-2","CACGAAACACTCTAAA",12,108.25,10.81,-0.02,0.04,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CACGAAACTAGACATA",1,5.21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13Y T85Y F99L P161R",4
"lib2","SARS-CoV-2","CACGAAAGAAAGCAAG",7,91.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37A R179W",2
"lib2","SARS-CoV-2","CACGAAAGTTGTGCAA",21,188.47,10.23,-0.6,0.03,2.93,1.04,0,"1 nonsynonymous","C31N",1
"lib2","SARS-CoV-2","CACGAACCGATATGAC",4,72.12,9.99,-0.84,0.06,2.66,1.04,0,">1 nonsynonymous","A14D N30M",2
"lib2","SARS-CoV-2","CACGAACTCAAGGGAA",3,40.94,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A18L A33L N107K S129C",4
"lib2","SARS-CoV-2","CACGAACTCCTTGAAA",7,135.68,10.85,0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGAAGAATGCACCA",4,78.24,10.21,-0.62,0.06,2.72,1.04,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","CACGAAGACAGAGGAT",9,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P V52A R124T",3
"lib2","SARS-CoV-2","CACGAAGAGACGAAGT",4,8.1,6,-4.84,2,3,1.08,0,">1 nonsynonymous","N13L W23R D98V",3
"lib2","SARS-CoV-2","CACGAAGGTCAAACGA",2,21.84,9.34,-1.49,0.18,1.87,1.16,0.01,">1 nonsynonymous","F8S T55F",2
"lib2","SARS-CoV-2","CACGAAGTCTCCTATT",2,29.12,10.47,-0.37,0.06,2.86,1.01,0,">1 nonsynonymous","N4K R27P",2
"lib2","SARS-CoV-2","CACGAAGTGTGCAACT",9,189.27,10.89,0.05,0.06,2.86,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGAATAAAAGGTCA",1,22.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37A L60K I104M T140S N157Y",5
"lib2","SARS-CoV-2","CACGAATAGTCCTGGA",4,124.68,6,-4.84,1.17,3,1.22,0,">1 nonsynonymous","T85Y A105F Y175N",3
"lib2","SARS-CoV-2","CACGAATATTGTCAAA",9,6.77,NA,NA,NA,NA,NA,NA,"stop","K94Q E141* L162Y P177G",4
"lib2","SARS-CoV-2","CACGAATCCTACTAAT",4,176.58,9.8,-1.04,0.04,2.86,1.07,0,">1 nonsynonymous","N4G N118V",2
"lib2","SARS-CoV-2","CACGAATCTACGTATA",13,66.41,8.32,-2.52,0.37,1.5,1.01,0.05,">1 nonsynonymous","T55F A89R P149F",3
"lib2","SARS-CoV-2","CACGAATCTCCTAACC",1,9.96,9.64,-1.19,0.28,1.67,1.01,0.02,">1 nonsynonymous","F62T D137S",2
"lib2","SARS-CoV-2","CACGAATGAATATAGA",10,61.05,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Y93W V103W T148R G152R T170L",5
"lib2","SARS-CoV-2","CACGAATGTTACTAAA",1,45.85,9.22,-1.62,0.06,3,1.03,0,">1 nonsynonymous","S43P Y119H E141I",3
"lib2","SARS-CoV-2","CACGAATTAAAATACT",3,28.52,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","Y159S Y165Q",2
"lib2","SARS-CoV-2","CACGAATTACGTTCAC",2,31.38,8.62,-2.22,0.09,3,1,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","CACGAATTCCAAAGAT",21,220.65,10.3,-0.54,0.03,2.83,1.09,0,"1 nonsynonymous","A22V",1
"lib2","SARS-CoV-2","CACGAATTGAAACAAG",3,28.38,7.99,-2.84,0.21,2.3,1.1,0.01,">1 nonsynonymous","G9E Y119V F126Y",3
"lib2","SARS-CoV-2","CACGAATTTAACTGAA",2,25.72,10.14,-0.69,0.11,2.26,1.02,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","CACGACAAACTCTGTG",18,16.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15M C49R F185L",3
"lib2","SARS-CoV-2","CACGACAATCCTCTGT",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F V180G",2
"lib2","SARS-CoV-2","CACGACAATGTATCAG",3,0.06,NA,NA,NA,NA,NA,NA,"stop","K56E I104W C150D Q163*",4
"lib2","SARS-CoV-2","CACGACAATGTGAGAC",4,0.4,NA,NA,NA,NA,NA,NA,"stop","G74K I88S N130Y I138T P149* S184V",6
"lib2","SARS-CoV-2","CACGACAATTCCCTAT",1,21.44,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","R25I L38Q L122Y",3
"lib2","SARS-CoV-2","CACGACACAGAAAAAT",1,15.77,10.47,-0.37,0.12,2.95,1,0,">1 nonsynonymous","T63L N120V",2
"lib2","SARS-CoV-2","CACGACAGATCAATAA",5,86.05,10.81,-0.03,0.04,2.9,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGACATAAACAAAC",9,0.21,NA,NA,NA,NA,NA,NA,"stop","N40I T148F Y159*",3
"lib2","SARS-CoV-2","CACGACATATTCCAAC",8,144.97,9.66,-1.18,0.02,2.95,1.04,0,"1 nonsynonymous","G146Q",1
"lib2","SARS-CoV-2","CACGACATTTACCAGG",2,14.91,10.53,-0.31,0.1,3,1,0,">1 nonsynonymous","P54H C61G",2
"lib2","SARS-CoV-2","CACGACCAACTCTACT",8,35.13,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S69D F99T N118I",3
"lib2","SARS-CoV-2","CACGACCTAAATACCA",14,10.96,NA,NA,NA,NA,NA,NA,"stop","L5E V11N K56V T170*",4
"lib2","SARS-CoV-2","CACGACGACACACCCC",1,11.87,9.65,-1.19,0.06,2.88,1.1,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","CACGACGACCCTCGTC",5,2.7,NA,NA,NA,NA,NA,NA,"stop","W23* L60C P133T",3
"lib2","SARS-CoV-2","CACGACGATCTGCGCC",2,131.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K87E P96F N157T",3
"lib2","SARS-CoV-2","CACGACGGCGATTACG",6,134.72,8.73,-2.11,0.08,2.58,1.12,0,">1 nonsynonymous","C61R G146C H189Y",3
"lib2","SARS-CoV-2","CACGACGGGATAACAA",1,1.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","CACGACTACTGCAAAT",7,47.97,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y35D Y91P V103S G166I P197Q",5
"lib2","SARS-CoV-2","CACGACTATGATACAA",4,24.5,6.11,-4.73,1,1.5,1.16,0.03,">1 nonsynonymous","F44S G51V N92W D97M S164I",5
"lib2","SARS-CoV-2","CACGACTCGGGAACCT",11,166.57,9.62,-1.21,0.06,2.27,1.06,0,">1 nonsynonymous","N58I G116F E141T",3
"lib2","SARS-CoV-2","CACGACTTAGGTAAGG",4,0,NA,NA,NA,NA,NA,NA,"stop","C49F P82Y F99L Y119P C150*",5
"lib2","SARS-CoV-2","CACGAGAACACTCAGT",16,4.81,NA,NA,NA,NA,NA,NA,"stop","F8I A33* P133F E154*",4
"lib2","SARS-CoV-2","CACGAGACCCCCTTTT",1,33.85,10.97,0.14,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGAGACTAAAAACA",9,156.9,10.6,-0.24,0.04,2.94,1.04,0,">1 nonsynonymous","G9V T148H",2
"lib2","SARS-CoV-2","CACGAGACTTTCCTAG",2,25.4,6.2,-4.64,0.86,1.5,1.18,0.03,">1 nonsynonymous","P82L G117T",2
"lib2","SARS-CoV-2","CACGAGCACGTCTGTC",3,38.77,8.23,-2.61,0.11,1.94,1.03,0,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","CACGAGCTCTCATCGG",3,22.65,10.52,-0.31,0.06,2.9,1.09,0,">1 nonsynonymous","I28W G152P",2
"lib2","SARS-CoV-2","CACGAGCTTGCAAATA",5,2.04,NA,NA,NA,NA,NA,NA,"stop","A81I S129*",2
"lib2","SARS-CoV-2","CACGAGGACGAGCCAG",2,31.86,10.78,-0.06,0.05,2.88,1.12,0,"1 nonsynonymous","Q84G",1
"lib2","SARS-CoV-2","CACGAGGACTTGTAAT",11,43.73,9.55,-1.29,0.27,1.61,1.06,0.03,">1 nonsynonymous","T15I S139F",2
"lib2","SARS-CoV-2","CACGAGGCCATTATCT",9,20.64,6.68,-4.16,0.49,1.5,1.14,0.02,">1 nonsynonymous","T15G Q79E F99T",3
"lib2","SARS-CoV-2","CACGAGGGGATTATGA",7,60.15,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V77M L122P N151K",3
"lib2","SARS-CoV-2","CACGAGTATATCAAAC",1,31.29,9.16,-1.67,0.07,1.87,1.02,0,">1 nonsynonymous","E10V K56V T63P N120H",4
"lib2","SARS-CoV-2","CACGAGTGGTAAGGCA",6,90.87,10.69,-0.15,0.03,2.88,1.14,0,">1 nonsynonymous","T55A G174S",2
"lib2","SARS-CoV-2","CACGAGTTCGACCATT",12,136.1,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F44N D98S V103D Y121L P161S",5
"lib2","SARS-CoV-2","CACGATAAAAATAGAA",3,34.65,6.28,-4.55,1.08,1.5,1.25,0.06,">1 nonsynonymous","N13I A67S",2
"lib2","SARS-CoV-2","CACGATAAATAATATC",1,21.09,10.91,0.07,0.06,3,1.03,0,">1 nonsynonymous","C61K T140R",2
"lib2","SARS-CoV-2","CACGATAAATAGCTTA",5,79.76,7.08,-3.75,0.33,1.5,1.09,0.02,">1 nonsynonymous","T63L Y91S T100N G174E",4
"lib2","SARS-CoV-2","CACGATACAAGACGGC",1,8.37,10.87,0.03,0.17,2.9,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CACGATACATTATCCT",4,57.4,10.01,-0.83,0.05,2.96,1.02,0,">1 nonsynonymous","R78S Y121T Q168R",3
"lib2","SARS-CoV-2","CACGATACCCGTGATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G Y178I",2
"lib2","SARS-CoV-2","CACGATAGAGATGTTG",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P F44G N107C N130E N171H",5
"lib2","SARS-CoV-2","CACGATAGAGTCTCCC",3,14.25,8.02,-2.82,0.51,1.5,1.17,0.06,">1 nonsynonymous","L5S C61Y P82T F160W S184T",5
"lib2","SARS-CoV-2","CACGATATGCACACTG",1,20.09,10.66,-0.18,0.08,2.94,1.05,0,">1 nonsynonymous","K48E Q84V T148S L187V",4
"lib2","SARS-CoV-2","CACGATATGGAGTTAT",7,64.96,9.38,-1.46,0.1,2.78,1.08,0,">1 nonsynonymous","N1Y G83T L125S",3
"lib2","SARS-CoV-2","CACGATATGTGCCCAA",1,32.86,10.36,-0.47,0.06,2.97,1,0,">1 nonsynonymous","A14G P149D",2
"lib2","SARS-CoV-2","CACGATATTAAATCGG",3,49.26,10.67,-0.17,0.04,2.93,1.05,0,">1 nonsynonymous","N4L T55A A192H",3
"lib2","SARS-CoV-2","CACGATCATGCGTTTA",4,12.2,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","D90E Y121G I138K",3
"lib2","SARS-CoV-2","CACGATCCTACTAAGT",4,84.12,10.75,-0.09,0.04,2.97,1.04,0,">1 nonsynonymous","T148N P191S",2
"lib2","SARS-CoV-2","CACGATCGCTAACTCC",2,26.72,6.07,-4.76,0.97,1.5,1.2,0.02,">1 nonsynonymous","R16I N40M G86N",3
"lib2","SARS-CoV-2","CACGATCTTGCCCGGA",17,118.13,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27L K87V V103Q F156N Y175K V181M",6
"lib2","SARS-CoV-2","CACGATGAACGCATGT",3,78.71,9.76,-1.08,0.07,2.14,1.06,0,">1 nonsynonymous","S19M K48T",2
"lib2","SARS-CoV-2","CACGATGAGAAATGAA",10,119.14,6,-4.84,1.32,1.5,1.08,0,">1 nonsynonymous","A14S A33L N107V R136E K198A",5
"lib2","SARS-CoV-2","CACGATGGTCAACAGG",27,170.14,7.99,-2.84,0.14,1.5,1.08,0.01,">1 nonsynonymous","A18L D90N T148I G174F",4
"lib2","SARS-CoV-2","CACGATGGTCAGTCAG",6,135.34,10.68,-0.16,0.03,2.88,1.1,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","CACGATGTAAAACAAA",4,46.63,8.39,-2.45,0.15,2.69,1.06,0.01,">1 nonsynonymous","R27D N157L",2
"lib2","SARS-CoV-2","CACGATTAGAATCGCT",1,24.94,10.13,-0.7,0.08,2.85,1.08,0,">1 nonsynonymous","T55G V180M",2
"lib2","SARS-CoV-2","CACGATTGATAAGAAA",5,43.43,8.65,-2.19,0.09,2.7,1.13,0,">1 nonsynonymous","D75W G166I",2
"lib2","SARS-CoV-2","CACGCAAAAACGAGCC",6,163.36,10.35,-0.49,0.05,2.99,1.04,0,">1 nonsynonymous","D90S L125A L188M K199V",4
"lib2","SARS-CoV-2","CACGCAAACGCGAAAC",11,138.52,8.32,-2.51,0.14,2.67,1.07,0.01,"1 nonsynonymous","N157C",1
"lib2","SARS-CoV-2","CACGCAAACTAAAACA",4,50.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A105L Y123E T148D",3
"lib2","SARS-CoV-2","CACGCAAAGTCATACC",7,339.22,8.56,-2.28,0.13,1.82,1.16,0.01,">1 nonsynonymous","R27P S139R G166L S184I",4
"lib2","SARS-CoV-2","CACGCAACAACCAATG",8,114.1,10.85,0.02,0.08,2.77,1.06,0,">1 nonsynonymous","V37G T148L",2
"lib2","SARS-CoV-2","CACGCAACAACCTCAG",3,10.11,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A14I Y93M",2
"lib2","SARS-CoV-2","CACGCAACCCCCAGGT",5,20.54,8.53,-2.31,0.15,2.52,1.03,0.01,">1 nonsynonymous","A42S K56H N151Y N157T",4
"lib2","SARS-CoV-2","CACGCACAATATAACG",9,34.84,6.04,-4.79,0.57,1.5,1.09,0.01,">1 nonsynonymous","C61S V77K T170F",3
"lib2","SARS-CoV-2","CACGCACCATGCTTGC",14,76.48,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","N1R Y121Q Y165C",3
"lib2","SARS-CoV-2","CACGCACCGATGCCAA",8,27.86,10.89,0.05,0.07,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGCACCTGTACTAT",7,72.67,10.3,-0.53,0.02,2.95,1.04,0,">1 nonsynonymous","A14T Y143F",2
"lib2","SARS-CoV-2","CACGCACCTTCACCTG",2,6.27,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","N4W A18R S43M R127L",4
"lib2","SARS-CoV-2","CACGCACGAAATTCGA",1,43.1,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5H C61N P161H V173H",4
"lib2","SARS-CoV-2","CACGCACGCGGGGGTA",5,216.74,10.69,-0.15,0.03,2.95,1.03,0,"1 nonsynonymous","E10M",1
"lib2","SARS-CoV-2","CACGCACTTCTCTATC",1,72.86,10.33,-0.51,0.04,2.71,1.03,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","CACGCAGCTTTCGAAG",2,24.23,10.82,-0.02,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGCAGTAAACAGCG",5,44.24,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37I F99N",2
"lib2","SARS-CoV-2","CACGCATACGATCCCC",8,1.93,NA,NA,NA,NA,NA,NA,"stop","A14P I104* L183Y",3
"lib2","SARS-CoV-2","CACGCATAGACTCTCA",15,253.21,8.73,-2.1,0.05,2.97,1.1,0,">1 nonsynonymous","K114M T170C",2
"lib2","SARS-CoV-2","CACGCATATGCGATAG",5,129.54,8.58,-2.25,0.07,2.86,1.06,0,">1 nonsynonymous","S43N L60K I104L G174V",4
"lib2","SARS-CoV-2","CACGCATATTTAGAGG",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T G101D A190S",3
"lib2","SARS-CoV-2","CACGCATCTATGAGAC",5,33.57,10.09,-0.75,0.11,2.24,1,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","CACGCATCTCTTGCGT",3,49.02,10.82,-0.01,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGCCAAATTAAATT",6,78.15,6,-4.84,1.14,1.5,1.14,0.01,">1 nonsynonymous","V37K I138E P161I",3
"lib2","SARS-CoV-2","CACGCCAAGATTATTA",4,14.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D90R I104M Y121T S147T",4
"lib2","SARS-CoV-2","CACGCCATAAAGTCAA",9,61.27,9.89,-0.95,0.07,2.17,1.07,0,">1 nonsynonymous","T15Y F185W",2
"lib2","SARS-CoV-2","CACGCCATACAAAATG",12,21.94,6,-4.84,2,1.5,1.4,0.03,">1 nonsynonymous","N1L T15K G74V",3
"lib2","SARS-CoV-2","CACGCCATAGGCAATC",5,37.55,7.51,-3.33,0.33,1.5,1,0.02,">1 nonsynonymous","G83D S129R R136L P169A",4
"lib2","SARS-CoV-2","CACGCCCACGTGACAA",3,7.94,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","L60P G83E D90F G117K F134T V181S",6
"lib2","SARS-CoV-2","CACGCCCGAACATGAA",1,26.5,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","G51S C61Y D90P Q163G",4
"lib2","SARS-CoV-2","CACGCCCGAACCCCAA",5,116.03,10.15,-0.68,0.04,2.95,1.03,0,">1 nonsynonymous","N1H P54T G174H",3
"lib2","SARS-CoV-2","CACGCCGTTTTGGTTA",7,43.66,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","R27V E135L Y165P",3
"lib2","SARS-CoV-2","CACGCCTAACGGCCAA",3,81.64,10.05,-0.79,0.06,2.71,1.03,0,">1 nonsynonymous","T15L I104F P149W",3
"lib2","SARS-CoV-2","CACGCCTCACTGACCC",10,117.1,10.86,0.03,0.06,2.91,1.1,0,">1 nonsynonymous","V153L A192V T201P",3
"lib2","SARS-CoV-2","CACGCCTGATTCCGGG",3,45.85,6,-4.84,0.65,3,1.07,0,">1 nonsynonymous","A14G D90G L162W",3
"lib2","SARS-CoV-2","CACGCCTGGGATCTTT",12,56.93,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C49R Q168K N171S",3
"lib2","SARS-CoV-2","CACGCGAAAAATCGTA",1,54.07,7.92,-2.92,0.19,1.5,1.08,0.01,">1 nonsynonymous","R27M K48Q G74W",3
"lib2","SARS-CoV-2","CACGCGAAAGGTAAAA",4,32.26,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","I2K F99T K114R",3
"lib2","SARS-CoV-2","CACGCGAGCATATCCA",3,39.72,10.23,-0.6,0.06,2.79,1,0,">1 nonsynonymous","K56F T85M",2
"lib2","SARS-CoV-2","CACGCGATCTTTGCAT",4,1.1,NA,NA,NA,NA,NA,NA,"stop","Y91D E154* F167M",3
"lib2","SARS-CoV-2","CACGCGATGTATGGGG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G K56Y F126M",3
"lib2","SARS-CoV-2","CACGCGCGAATAGGCT",2,28.61,10.1,-0.73,0.09,2.75,1,0,">1 nonsynonymous","V37Y T100W Y123K A145T",4
"lib2","SARS-CoV-2","CACGCGGAGAAAAACT",6,57.05,8.55,-2.29,0.11,1.68,1.12,0,">1 nonsynonymous","A33P D90A N107S",3
"lib2","SARS-CoV-2","CACGCGGTAAAACCTA",5,39.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24T G83P W106K",3
"lib2","SARS-CoV-2","CACGCGTATTCCAGAA",5,47.47,9.38,-1.45,0.06,1.86,1.04,0,">1 nonsynonymous","A18S T55I L131C F160Q",4
"lib2","SARS-CoV-2","CACGCGTCTAATGTAT",5,37.3,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R27L N64I A67D T170Y",4
"lib2","SARS-CoV-2","CACGCGTCTCGACCCT",8,108.85,10.27,-0.56,0.03,2.93,1.07,0,"1 nonsynonymous","Y35C",1
"lib2","SARS-CoV-2","CACGCGTCTTCTACTT",2,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F E154W",2
"lib2","SARS-CoV-2","CACGCTAAAATATTTT",6,31.88,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N64S F70N",2
"lib2","SARS-CoV-2","CACGCTACCCTGAAAT",12,2.55,NA,NA,NA,NA,NA,NA,"stop","I80* N110R",2
"lib2","SARS-CoV-2","CACGCTAGAAAAAATA",11,11.86,NA,NA,NA,NA,NA,NA,"stop","D59* K94E A190R",3
"lib2","SARS-CoV-2","CACGCTAGACTGAATA",2,15.64,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A22T K94T G155F",3
"lib2","SARS-CoV-2","CACGCTAGCTTTGATG",5,29.74,10.52,-0.31,0.06,2.86,1.12,0,">1 nonsynonymous","C61S G83Y A190W",3
"lib2","SARS-CoV-2","CACGCTATAGACCTAT",2,41,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S19L T63D W106L T201E",4
"lib2","SARS-CoV-2","CACGCTATATCCATGC",10,54.78,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8A D68L L95H T148P",4
"lib2","SARS-CoV-2","CACGCTCATATAGCAA",3,40.22,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K26N Y93N Y165E",3
"lib2","SARS-CoV-2","CACGCTCTACTTGCGA",1,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C Y119H",2
"lib2","SARS-CoV-2","CACGCTCTTTAAACGT",6,60.64,10.72,-0.12,0.06,2.88,1.08,0,"1 nonsynonymous","L5C",1
"lib2","SARS-CoV-2","CACGCTCTTTTTTGAA",2,72.26,10.63,-0.21,0.1,2.73,1.07,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","CACGCTGTCCATCGAA",2,14.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D90R W106C G117S",3
"lib2","SARS-CoV-2","CACGCTTATTATGGCC",2,95.01,10.7,-0.14,0.05,2.94,1.07,0,"1 nonsynonymous","T100W",1
"lib2","SARS-CoV-2","CACGCTTCTTTCTGCT",3,7.1,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2K R25M S53R A81L E141W P169M",6
"lib2","SARS-CoV-2","CACGCTTTACAATTTA",9,48.45,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C31M Y93M E141Q",3
"lib2","SARS-CoV-2","CACGCTTTCACGATCA",7,248.65,10.73,-0.11,0.04,2.92,1.08,0,"1 nonsynonymous","C61I",1
"lib2","SARS-CoV-2","CACGCTTTTCTTACAA",4,35.77,6,-4.84,2,3,1.08,0,">1 nonsynonymous","S36G I88R K128I",3
"lib2","SARS-CoV-2","CACGGAAAAAAGCCCG",1,0.17,NA,NA,NA,NA,NA,NA,"stop","D90V S200*",2
"lib2","SARS-CoV-2","CACGGAAAAATAATCA",2,21.77,10.44,-0.4,0.07,3,1.04,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","CACGGAAATAATAACA",4,80.95,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F44I S113T C158K",3
"lib2","SARS-CoV-2","CACGGACATATGCAAA",2,0.46,NA,NA,NA,NA,NA,NA,"stop","A14D T63C V115* F160G T201*",5
"lib2","SARS-CoV-2","CACGGACATGTATTGT",1,26.25,8.77,-2.06,0.14,1.72,1.07,0.01,">1 nonsynonymous","I28V S139Q G152Y F160S",4
"lib2","SARS-CoV-2","CACGGAGTACAGTTCG",1,24.64,9.84,-1,0.13,2.21,1.02,0.01,">1 nonsynonymous","S41A A81T L95V K199A",4
"lib2","SARS-CoV-2","CACGGAGTAGAATCAC",7,108.86,9.88,-0.96,0.05,2.82,1.05,0,">1 nonsynonymous","G9C R78E F134N",3
"lib2","SARS-CoV-2","CACGGATAAAAAAATA",5,47.01,10.86,0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGGATATGCACATA",3,19.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141V V181N",2
"lib2","SARS-CoV-2","CACGGATCGAACAAAT",11,161.58,10.53,-0.3,0.04,2.91,1.08,0,"1 nonsynonymous","T46C",1
"lib2","SARS-CoV-2","CACGGATTAACATCGG",5,51.71,10.77,-0.07,0.05,2.97,1.06,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","CACGGCAGATGGCATG",2,106.82,9.99,-0.85,0.07,2.71,1.01,0,">1 nonsynonymous","L57H T100N F160Q",3
"lib2","SARS-CoV-2","CACGGCAGCGTAAACC",10,146.68,10.85,0.01,0.08,2.94,1.08,0,"1 nonsynonymous","S29T",1
"lib2","SARS-CoV-2","CACGGCATAAGCTATG",16,174.33,10.84,0.01,0.05,2.98,1.05,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","CACGGCATTTCTTACC",3,63.05,7.92,-2.91,0.3,1.5,1.02,0.03,">1 nonsynonymous","I28K C61I G83R R136K",4
"lib2","SARS-CoV-2","CACGGCTATACATTAA",1,5.21,11.57,0.74,0.18,2.97,1,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CACGGGAAAGATACGT",3,5.68,7.98,-2.85,0.24,3,1,0.03,">1 nonsynonymous","S36L R73M N118G T201D",4
"lib2","SARS-CoV-2","CACGGGAAATAAAACT",11,175.93,10.88,0.05,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGGGAATACCCGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","V20N Q176*",2
"lib2","SARS-CoV-2","CACGGGCAATACCTAC",3,20.86,9.83,-1.01,0.04,2.95,1.05,0,"1 nonsynonymous","Q168E",1
"lib2","SARS-CoV-2","CACGGGGAAGTTGCCA",10,76.35,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9K I72W",2
"lib2","SARS-CoV-2","CACGGGGGAATTAAAA",4,65.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9K D34L R127V",3
"lib2","SARS-CoV-2","CACGGGGTAATTAGTA",3,7.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2C N13G C49V A81S G86V K114R P149S",7
"lib2","SARS-CoV-2","CACGGGTCAGTAACTT",2,38.51,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","D59Q D98R F134P T148S Y178S",5
"lib2","SARS-CoV-2","CACGGGTTATGTAGTG",1,27.21,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L60S R124V",2
"lib2","SARS-CoV-2","CACGGGTTTATATTAG",3,50.95,8.04,-2.8,0.17,1.6,1.07,0.01,">1 nonsynonymous","Y39I D112A",2
"lib2","SARS-CoV-2","CACGGTAAACACGTAT",4,71.02,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I2N Y35P F44S L95Q N107M A145S",6
"lib2","SARS-CoV-2","CACGGTACTTGAACGC",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F C102S G116L",3
"lib2","SARS-CoV-2","CACGGTCCAGTTATGC",6,38.17,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S19V R25T G51V",3
"lib2","SARS-CoV-2","CACGGTGACCGATCAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","F8* N120P",2
"lib2","SARS-CoV-2","CACGGTGCATAAATGA",3,27.62,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","W23Q C49V",2
"lib2","SARS-CoV-2","CACGGTTCAAAGGAAA",2,54.6,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9I P54D D97L E141T C150L",5
"lib2","SARS-CoV-2","CACGGTTTATTTGCTG",6,92.3,10.4,-0.44,0.04,2.82,1.11,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","CACGGTTTGAGTCTTA",7,28.36,6.86,-3.98,0.39,1.5,1.1,0.03,">1 nonsynonymous","T3M R27D W106R Y159G",4
"lib2","SARS-CoV-2","CACGTAAAAAGTCTAC",2,0.9,NA,NA,NA,NA,NA,NA,"stop","C6F E10D S69* K87R D98F N107L",6
"lib2","SARS-CoV-2","CACGTAAAATTACACG",13,89.66,9.01,-1.83,0.09,1.64,1.1,0,">1 nonsynonymous","C31V G83R D98V",3
"lib2","SARS-CoV-2","CACGTAAACGATTTCC",4,140.75,6.4,-4.43,0.28,1.52,1.16,0,">1 nonsynonymous","F44I T63L Q176R",3
"lib2","SARS-CoV-2","CACGTAAAGTCCGATA",2,28.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G86S D112Q F134W E141V",4
"lib2","SARS-CoV-2","CACGTAACAACAAGTG",2,21.62,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","F70V R124I Y159N",3
"lib2","SARS-CoV-2","CACGTAACCCCACTTA",4,108.55,10.74,-0.1,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGTAACGATTATCG",23,217.58,7.78,-3.05,0.13,1.79,1.1,0.01,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CACGTAACTCTCAATA",6,34.33,6.13,-4.7,0.53,3,1.18,0.01,">1 nonsynonymous","G51Y F99V",2
"lib2","SARS-CoV-2","CACGTAAGCTTTTCGA",3,27.01,10.73,-0.11,0.09,2.84,1.17,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","CACGTAAGGCCGCGAA",13,66.8,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19Y I28R V37K",3
"lib2","SARS-CoV-2","CACGTAATATGTTCCA",3,42.27,7.07,-3.77,0.08,2.53,1.12,0,"1 nonsynonymous","C158T",1
"lib2","SARS-CoV-2","CACGTACAAATACATC",5,171.48,10.91,0.07,0.05,2.95,1.06,0,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","CACGTACCCTACAACT",5,14.56,6,-4.84,1.58,3,1.2,0.01,">1 nonsynonymous","F8V L183P",2
"lib2","SARS-CoV-2","CACGTACCTGTAAATC",16,176.2,6.31,-4.53,0.42,1.5,1.16,0.01,">1 nonsynonymous","A42R N120L C158E",3
"lib2","SARS-CoV-2","CACGTACCTTCCAAAC",22,252.01,9.55,-1.29,0.08,2.42,1.07,0,">1 nonsynonymous","N30Y L162F",2
"lib2","SARS-CoV-2","CACGTACGATCCACTT",7,66.67,9.91,-0.92,0.11,2.4,1.11,0,"1 nonsynonymous","C102M",1
"lib2","SARS-CoV-2","CACGTACGGGTCAGGC",8,183.74,10.38,-0.45,0.03,2.83,1.04,0,">1 nonsynonymous","A42V Y66K P197R",3
"lib2","SARS-CoV-2","CACGTAGTCAATCACA",5,27.32,9.88,-0.95,0.07,2.06,1,0,">1 nonsynonymous","L57D N64K P133A",3
"lib2","SARS-CoV-2","CACGTATACGATCTGG",7,96.34,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","V37R C49F I88N F99R N107P F160I L188D",7
"lib2","SARS-CoV-2","CACGTATCTTACAAAT",1,16.98,9.83,-1.01,0.13,2.02,1.05,0,">1 nonsynonymous","L57F R136I",2
"lib2","SARS-CoV-2","CACGTATTACCAGCCG",14,4.64,NA,NA,NA,NA,NA,NA,"stop","A14* S41V L125Y",3
"lib2","SARS-CoV-2","CACGTCAAACTTTAGT",3,37.13,9.82,-1.02,0.07,2.29,1.01,0,">1 nonsynonymous","C61Y D90V",2
"lib2","SARS-CoV-2","CACGTCAAATAACACT",2,8.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Q79S R127W",2
"lib2","SARS-CoV-2","CACGTCACACTTAAAA",4,9,10.71,-0.13,0.06,2.85,1.09,0,"1 nonsynonymous","N151C",1
"lib2","SARS-CoV-2","CACGTCAGGCTCTCTA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122S K198S",2
"lib2","SARS-CoV-2","CACGTCATTGGGCCGG",3,35.95,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6D Y39S F70A D98H P149D F156M",6
"lib2","SARS-CoV-2","CACGTCCAAGCAATGA",9,87.83,6,-4.84,2,1.5,1.31,0.04,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","CACGTCCAGATATGAT",4,28.89,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P7C I72S",2
"lib2","SARS-CoV-2","CACGTCCATTAGAATT",7,2.27,NA,NA,NA,NA,NA,NA,"stop","R27T Q84G I104W Y143*",4
"lib2","SARS-CoV-2","CACGTCCCTCTAAGAA",2,12.34,10.61,-0.23,0.08,2.94,1.07,0,">1 nonsynonymous","Q84L S129N",2
"lib2","SARS-CoV-2","CACGTCGCTACTGATT",8,1.03,NA,NA,NA,NA,NA,NA,"stop","S19D Y35V Y119C F126* Y143T P177I",6
"lib2","SARS-CoV-2","CACGTCTGCCCTAAAG",2,63.3,9.93,-0.91,0.06,2.66,1,0,">1 nonsynonymous","K48I K56N A89S I138S",4
"lib2","SARS-CoV-2","CACGTGAGTAACATGA",4,34.7,10.57,-0.27,0.07,2.93,1.07,0,">1 nonsynonymous","T55N P133S",2
"lib2","SARS-CoV-2","CACGTGATAAAACAAA",1,9.82,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T15S I88K L131V",3
"lib2","SARS-CoV-2","CACGTGATGGGGACGT",5,13.83,6.2,-4.63,0.2,3,1.08,0,">1 nonsynonymous","N13I F70M S200P",3
"lib2","SARS-CoV-2","CACGTGATTCACCAAG",6,3.69,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib2","SARS-CoV-2","CACGTGCACATAATAT",4,40.83,8.19,-2.64,0.18,2.07,1.08,0.01,">1 nonsynonymous","A42S S113L",2
"lib2","SARS-CoV-2","CACGTGCATCAAATAC",6,32.41,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L60P Y93W L125W V153Y A190E",5
"lib2","SARS-CoV-2","CACGTGCCCCATAGCA",3,280.31,8.23,-2.6,0.11,2.03,1.05,0,">1 nonsynonymous","A33K G152A T170F A190T",4
"lib2","SARS-CoV-2","CACGTGCCGAACGTAA",4,61.22,9.73,-1.1,0.05,2.9,1.08,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","CACGTGCTATAGATGT",6,59.75,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25A V37S C61M N109R G146I T201R",6
"lib2","SARS-CoV-2","CACGTGCTCTGTTATT",3,0.58,NA,NA,NA,NA,NA,NA,"stop","G9E W23S L57R N107* D112R",5
"lib2","SARS-CoV-2","CACGTGCTGTGGGATT",12,180.78,9.08,-1.76,0.32,1.5,1,0.05,">1 nonsynonymous","N92L S184V",2
"lib2","SARS-CoV-2","CACGTGGTAGAGTTAA",3,48.65,8.3,-2.53,0.25,1.7,1.1,0.02,">1 nonsynonymous","S113P E141N",2
"lib2","SARS-CoV-2","CACGTGTTTGCATTAC",3,74.21,10.73,-0.11,0.06,2.85,1.1,0,">1 nonsynonymous","Y35L N58I L122C",3
"lib2","SARS-CoV-2","CACGTTAATGTAATTT",2,64.56,9.13,-1.71,0.05,3,1.04,0,">1 nonsynonymous","Y119D K128I",2
"lib2","SARS-CoV-2","CACGTTACAGAAGTTC",1,10.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99A Y143K",2
"lib2","SARS-CoV-2","CACGTTAGTATATTAA",1,16.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F F44T C61I G166E",4
"lib2","SARS-CoV-2","CACGTTATAATATAGT",5,21.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N40L D90R F167H",3
"lib2","SARS-CoV-2","CACGTTATAGGAAGCG",11,2.83,NA,NA,NA,NA,NA,NA,"stop","V20R S53A T63I F156* P169L",5
"lib2","SARS-CoV-2","CACGTTATTTACCTAA",3,30.25,10.82,-0.02,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CACGTTCATCACAAAT",7,40.12,9.55,-1.28,0.22,1.5,1.04,0.02,">1 nonsynonymous","Y50N P191S",2
"lib2","SARS-CoV-2","CACGTTCCAACAGAAA",1,21.15,9.4,-1.44,0.09,2.73,1.04,0.01,">1 nonsynonymous","Y143H Y178S",2
"lib2","SARS-CoV-2","CACGTTCTGAAGAATA",5,16.84,9.57,-1.27,0.05,3,1.03,0,">1 nonsynonymous","V37A G146R",2
"lib2","SARS-CoV-2","CACGTTGATGTAACCT",5,11.13,9.11,-1.73,0.38,1.82,1.16,0.06,">1 nonsynonymous","Y165L T201V",2
"lib2","SARS-CoV-2","CACGTTGCAGAACTAT",5,57.36,9.49,-1.34,0.11,1.93,1.09,0,"1 nonsynonymous","F185S",1
"lib2","SARS-CoV-2","CACGTTGTGTTGAGAG",6,39.96,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","R16Y N24W K56I E76V",4
"lib2","SARS-CoV-2","CACGTTTGTTTATATT",2,49.55,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5F L57T P82V F134T",4
"lib2","SARS-CoV-2","CACTAAAAAAAATTTT",3,48.38,8.48,-2.35,0.16,2.55,1.1,0.01,">1 nonsynonymous","N13D G117T",2
"lib2","SARS-CoV-2","CACTAAAAAACGTTGA",6,143.04,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86S D137V",2
"lib2","SARS-CoV-2","CACTAAAAAGATACGA",8,30.83,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L38K P82S P96Y N110P",4
"lib2","SARS-CoV-2","CACTAAAAAGTGATCC",5,80.61,10.19,-0.65,0.06,2.44,1.04,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","CACTAAAACCTTAACC",5,71.54,8.17,-2.66,0.07,2.01,1.1,0,">1 nonsynonymous","N24E V32G S113I",3
"lib2","SARS-CoV-2","CACTAAACCAAGTATA",2,28.37,10.82,-0.01,0.07,2.83,1.19,0,">1 nonsynonymous","L122R V153L",2
"lib2","SARS-CoV-2","CACTAAACGCAAGATT",14,85.7,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D68K G146M P197N",3
"lib2","SARS-CoV-2","CACTAAACTACCGATG",2,20.85,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G9V S43E I72F N107S K114T",5
"lib2","SARS-CoV-2","CACTAAACTGCACACA",4,9.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CACTAAAGAATTAATA",13,61.45,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V20M W106K",2
"lib2","SARS-CoV-2","CACTAAAGATTACATT",1,24.38,10.1,-0.73,0.1,2.82,1.06,0.01,">1 nonsynonymous","Y121A Q168A",2
"lib2","SARS-CoV-2","CACTAAATATTAAAAG",8,24,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V52S D90Q D98T K128N Y175V",5
"lib2","SARS-CoV-2","CACTAAATCCTGACAC",3,108.93,8.86,-1.97,0.06,2.72,1.08,0,">1 nonsynonymous","C6N K56L F156Q",3
"lib2","SARS-CoV-2","CACTAAATGGTGAAGG",1,13.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R73A Y121Q Y178G",3
"lib2","SARS-CoV-2","CACTAAATTAACAACT",3,1.07,NA,NA,NA,NA,NA,NA,"stop","Y35T S45K F62L P96*",4
"lib2","SARS-CoV-2","CACTAACAAAAGGGTT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","W106S I142W V180*",3
"lib2","SARS-CoV-2","CACTAACAACCCTTGC",2,55.35,10.09,-0.75,0.04,2.79,1,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","CACTAACATCCGAAGA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P82Y Y123*",2
"lib2","SARS-CoV-2","CACTAACCCAGACAAC",1,12.08,10.26,-0.58,0.09,2.78,1.14,0.01,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","CACTAACTAGTTTTGT",8,130.54,8.83,-2.01,0.11,2.04,1.07,0,">1 nonsynonymous","T15R F47Y N58I G166S T201K",5
"lib2","SARS-CoV-2","CACTAAGAACGCAGAA",4,65.6,9.72,-1.11,0.08,2.33,1.09,0,">1 nonsynonymous","F70M K114L",2
"lib2","SARS-CoV-2","CACTAAGACGTCTATG",2,42.55,10.71,-0.13,0.06,2.9,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTAAGCGTGTTCCG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","F8W D90* L95E N107V",4
"lib2","SARS-CoV-2","CACTAAGCTCCTAACG",3,26.18,8.09,-2.75,0.16,1.89,1.09,0.01,">1 nonsynonymous","N107I C195I",2
"lib2","SARS-CoV-2","CACTAAGGCACTCAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A18* R27L S41T P82L S147A F156V",6
"lib2","SARS-CoV-2","CACTAAGGTAGCTGAA",7,67.28,9.58,-1.26,0.06,2.87,1.11,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","CACTAAGGTAGTTTCA",10,52.12,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3L Y39L F44D C49I D90A N120K P149L",7
"lib2","SARS-CoV-2","CACTAAGTATTGTGCA",7,39.88,6.3,-4.54,1.13,1.5,1.24,0.06,">1 nonsynonymous","W23L A33N F44S N58I",4
"lib2","SARS-CoV-2","CACTAAGTGCCGGTTT",6,2.46,NA,NA,NA,NA,NA,NA,"stop","V37F F70Y G146*",3
"lib2","SARS-CoV-2","CACTAATAACTTACTA",3,70.38,10.79,-0.04,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTAATAAGTCGAGC",5,44.19,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D34Y N157F",2
"lib2","SARS-CoV-2","CACTAATACCAGCGTG",1,24.51,10.54,-0.3,0.06,2.92,1.12,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","CACTAATATCCGACGT",4,50.27,10.43,-0.41,0.04,2.96,1.05,0,">1 nonsynonymous","Q84R K87V E135A",3
"lib2","SARS-CoV-2","CACTAATCAACCGCCA",2,157.88,10.75,-0.08,0.03,2.94,1.06,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","CACTAATCAGCAAAAG",9,75.51,10.08,-0.76,0.07,2.59,1.02,0,">1 nonsynonymous","F12L A81R",2
"lib2","SARS-CoV-2","CACTAATCCTAACCGA",3,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S G51W",2
"lib2","SARS-CoV-2","CACTAATCTAATTATG",4,51.84,10.21,-0.62,0.07,2.74,1.08,0,">1 nonsynonymous","L5K S41I F185L",3
"lib2","SARS-CoV-2","CACTAATCTTGATGAA",3,150.29,10.25,-0.58,0.05,2.84,1.1,0,">1 nonsynonymous","K56I S147Y P191S",3
"lib2","SARS-CoV-2","CACTAATGAATGCATT",8,75.16,10.81,-0.03,0.08,2.94,1.08,0,">1 nonsynonymous","I2T D98N",2
"lib2","SARS-CoV-2","CACTAATGGGGGACTA",1,45.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11W G51C G146W F167Y Y178A",5
"lib2","SARS-CoV-2","CACTAATTCGGGAATG",3,87.42,9.23,-1.61,0.08,2.8,1.09,0,">1 nonsynonymous","S43P Y119H E141I",3
"lib2","SARS-CoV-2","CACTAATTGAGCGCTA",2,59.32,8.48,-2.36,0.1,2.94,1.07,0,">1 nonsynonymous","V37A L122M P149L Y175A",4
"lib2","SARS-CoV-2","CACTACAAAAATCATC",3,22.57,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S41Q T85S K94I N120G S139M S184L",6
"lib2","SARS-CoV-2","CACTACAATCCATCTT",1,7.33,9.78,-1.05,0.19,1.98,1.04,0.01,">1 nonsynonymous","V20L Q168Y",2
"lib2","SARS-CoV-2","CACTACAATGTTGCGA",5,250.82,10.18,-0.65,0.04,2.9,1.08,0,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","CACTACACAATTGAAT",7,79.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9L Y35S T63N D68A P161I",5
"lib2","SARS-CoV-2","CACTACACGATTACGT",8,196.9,10.88,0.04,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTACAGAGAAGCAT",5,57.82,9.26,-1.58,0.12,1.87,1.15,0.01,">1 nonsynonymous","F17T T63E C195S",3
"lib2","SARS-CoV-2","CACTACATACCGATTC",6,162.2,10.73,-0.11,0.04,2.93,1.08,0,">1 nonsynonymous","R27E S41T K56E",3
"lib2","SARS-CoV-2","CACTACATTAGGGTCT",5,2.25,NA,NA,NA,NA,NA,NA,"stop","G86A T140* C150F E154T F160H",5
"lib2","SARS-CoV-2","CACTACATTGTGAATA",11,94.59,10.42,-0.41,0.04,2.93,1.08,0,">1 nonsynonymous","E76D N151C",2
"lib2","SARS-CoV-2","CACTACATTTAACACT",9,44.44,8.16,-2.67,0.39,1.5,1,0.08,">1 nonsynonymous","L95P S129N",2
"lib2","SARS-CoV-2","CACTACCAAGAAAAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","F8M P82*",2
"lib2","SARS-CoV-2","CACTACCATTCAAAAT",9,95.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L60A N107R C158V",3
"lib2","SARS-CoV-2","CACTACCGTTCAATAC",12,2.95,NA,NA,NA,NA,NA,NA,"stop","A33I L38V F44N K48L N64* N157L",6
"lib2","SARS-CoV-2","CACTACCTGCTGAGAT",5,21.82,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","L38R A42D Q84W R136K G166V",5
"lib2","SARS-CoV-2","CACTACCTTCAAACTG",6,67.4,10.81,-0.02,0.05,2.92,1.1,0,">1 nonsynonymous","D98A Y123K",2
"lib2","SARS-CoV-2","CACTACCTTGAAGCCT",11,105.12,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R16V D34A V77M V115Q I142R Y178P",6
"lib2","SARS-CoV-2","CACTACGCTCTTTAAC",12,155.98,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","A18T G83Y I88N",3
"lib2","SARS-CoV-2","CACTACGGCTAACCAA",11,113.2,10.06,-0.78,0.06,2.19,1.05,0,">1 nonsynonymous","N4I K56I T100N",3
"lib2","SARS-CoV-2","CACTACGGGAGAACAT",3,17.21,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48Y L60S G74C A89M E141Y",5
"lib2","SARS-CoV-2","CACTACTAAAAGAAAA",3,36.43,9.46,-1.38,0.15,1.93,1.04,0.01,">1 nonsynonymous","G51A Y91M",2
"lib2","SARS-CoV-2","CACTACTACAGAGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","K48* Y121V",2
"lib2","SARS-CoV-2","CACTACTATTAATGCC",2,66.64,9.35,-1.49,0.13,1.85,1.13,0.01,">1 nonsynonymous","C61R V173T",2
"lib2","SARS-CoV-2","CACTACTCCTCACTTT",9,35.33,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Y35R Y66V F99H T170E",4
"lib2","SARS-CoV-2","CACTACTGCAATTATG",8,78.79,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T55I G86C F156N",3
"lib2","SARS-CoV-2","CACTACTGTCCCGCAA",2,16.21,9.32,-1.52,0.1,2.31,1.13,0,">1 nonsynonymous","C61R Q84T Y91C S147M",4
"lib2","SARS-CoV-2","CACTAGAACACTAACG",2,33.96,10.72,-0.12,0.05,2.8,1.18,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","CACTAGAAGAAAATAT",9,21.76,6,-4.84,2,2.88,1.24,0.02,">1 nonsynonymous","V37Y G51L V103R V173M",4
"lib2","SARS-CoV-2","CACTAGAAGAATCTGG",4,47.18,7.24,-3.6,0.16,1.52,1.08,0.01,">1 nonsynonymous","V11C Y175N",2
"lib2","SARS-CoV-2","CACTAGACTACATAAG",5,65.32,10.81,-0.02,0.04,3,1.01,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","CACTAGATAATATTCC",3,150.51,10.1,-0.73,0.07,2.54,1.03,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","CACTAGCAACGTATAA",5,18.4,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A22F P54R D112W S139T G174R",5
"lib2","SARS-CoV-2","CACTAGCAGAGTCCGA",3,41.27,10.87,0.04,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTAGCAGGTAACCA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","T55L P169R Y175*",3
"lib2","SARS-CoV-2","CACTAGCATCCTTTTA",2,15.78,9.98,-0.85,0.14,2.56,1.06,0.01,">1 nonsynonymous","F44K V173G K198E",3
"lib2","SARS-CoV-2","CACTAGCTAATCTTTA",3,29.26,6.99,-3.84,0.33,1.5,1.19,0.02,">1 nonsynonymous","L5M A33G P82T",3
"lib2","SARS-CoV-2","CACTAGCTTTTTGAAC",12,3.49,NA,NA,NA,NA,NA,NA,"stop","G146* S164C V181E",3
"lib2","SARS-CoV-2","CACTAGGACCTTGTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6T D59K S69*",3
"lib2","SARS-CoV-2","CACTAGGCCATAAAAC",1,0.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","CACTAGGCTTAGACCG",4,90.67,9.95,-0.88,0.08,2.33,1.1,0,">1 nonsynonymous","F12W N58H T148S P197S",4
"lib2","SARS-CoV-2","CACTAGGTATAGGCAC",1,99.23,10.83,0,0.03,2.9,1.09,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","CACTAGTAATAAACCT",5,1.69,NA,NA,NA,NA,NA,NA,"stop","F8V A42T C49I A81* D98S Q176S",6
"lib2","SARS-CoV-2","CACTAGTAGTTTGATA",2,10,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","L5W N64A I72G W106A K114F G146E",6
"lib2","SARS-CoV-2","CACTAGTCACAGTAAT",2,88.26,9.5,-1.33,0.12,1.65,1.07,0.01,">1 nonsynonymous","P54R Y123M S139V S184H",4
"lib2","SARS-CoV-2","CACTAGTGTACCCATC",3,5.86,10.85,0.01,0.11,2.87,1.14,0,">1 nonsynonymous","G9N Q84R D97T K114G I142K",5
"lib2","SARS-CoV-2","CACTAGTTAGAACATG",4,26.74,10.55,-0.29,0.08,2.94,1.05,0,"1 nonsynonymous","N130W",1
"lib2","SARS-CoV-2","CACTATAAACAAGAAC",1,0.28,NA,NA,NA,NA,NA,NA,"stop","N58* D98W F167R",3
"lib2","SARS-CoV-2","CACTATAAATACAGTA",3,97.32,10.37,-0.46,0.07,2.8,1.06,0,">1 nonsynonymous","N1Q C61W",2
"lib2","SARS-CoV-2","CACTATAAATATAATA",8,77.96,6.65,-4.18,0.32,1.5,1.1,0.01,">1 nonsynonymous","C61Y S139L G155L",3
"lib2","SARS-CoV-2","CACTATAAATCTAATC",1,30.22,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9D S41P G86I",3
"lib2","SARS-CoV-2","CACTATAAGGGTTTGC",2,61.33,6.19,-4.65,0.91,1.5,1.18,0.06,">1 nonsynonymous","C6E D68A T148K P177G",4
"lib2","SARS-CoV-2","CACTATAATACGCTGG",2,8.22,10.65,-0.18,0.11,2.86,1.14,0,">1 nonsynonymous","A42H N120R K128R",3
"lib2","SARS-CoV-2","CACTATACACACTGTG",6,157.52,10.74,-0.09,0.03,2.93,1.08,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","CACTATACTCGTCCAA",2,36.52,9.81,-1.03,0.11,2.06,1.07,0.01,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","CACTATAGGAAACCAA",7,77.29,9.99,-0.85,0.08,2.71,1,0,">1 nonsynonymous","N1I C6V",2
"lib2","SARS-CoV-2","CACTATAGGATCTGAG",2,91.86,10,-0.83,0.07,2.19,1.05,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","CACTATATTTAGCAGT",1,0.35,NA,NA,NA,NA,NA,NA,"stop","T3A D90W S129V G166*",4
"lib2","SARS-CoV-2","CACTATCAAGTAAAGT",2,28.39,6.45,-4.39,0.68,1.5,1.25,0.02,">1 nonsynonymous","C6G S19A T46Q A105L Y143H P149E",6
"lib2","SARS-CoV-2","CACTATCCCCCCAAGT",10,166.6,10.55,-0.28,0.03,2.9,1.05,0,">1 nonsynonymous","P133T Q168F",2
"lib2","SARS-CoV-2","CACTATCCTCCTGGAA",2,3.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","CACTATCCTTATGACC",17,127.21,8.16,-2.68,0.13,1.63,1.12,0.01,">1 nonsynonymous","C61E F99L G117L",3
"lib2","SARS-CoV-2","CACTATCGGTGCCAAT",2,15.29,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9P F47V P177N",3
"lib2","SARS-CoV-2","CACTATCGTTGGCAAC",2,23.18,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","V11F T100A V180S",3
"lib2","SARS-CoV-2","CACTATCTCTTTCACG",7,81.5,6.13,-4.71,0.57,1.5,1.18,0.01,">1 nonsynonymous","S113I I138R",2
"lib2","SARS-CoV-2","CACTATCTTATAAGCA",4,77.33,7.88,-2.95,0.1,2.09,1.08,0,"1 nonsynonymous","G74V",1
"lib2","SARS-CoV-2","CACTATCTTTGGAACG",1,24.02,8.21,-2.63,0.11,2.96,1.01,0,">1 nonsynonymous","T100F A145R P169E K199P",4
"lib2","SARS-CoV-2","CACTATGAAAGCGAAA",6,105.32,10.9,0.07,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTATGAAGTGGAAA",2,22.57,10.54,-0.29,0.09,2.96,1.06,0.01,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","CACTATGACTAACCAA",3,27.54,10.9,0.07,0.08,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTATGAGATAAATA",13,35.3,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V11G A42L R179Y",3
"lib2","SARS-CoV-2","CACTATGATGAGCTTA",8,117.97,10.18,-0.66,0.04,2.67,1.02,0,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","CACTATGATTGTTTTT",2,7.17,7.39,-3.44,0.48,1.5,1,0.03,">1 nonsynonymous","C61W C150L G155V",3
"lib2","SARS-CoV-2","CACTATGCAAAGGTAA",12,1.89,NA,NA,NA,NA,NA,NA,"stop","Q84* A105G R124L",3
"lib2","SARS-CoV-2","CACTATGGACAAACAC",1,76.96,8.67,-2.17,0.08,2.93,1.07,0,">1 nonsynonymous","F62L L125T G155W",3
"lib2","SARS-CoV-2","CACTATGGGACCCAAG",3,18.72,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","CACTATGTCAGACCAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","CACTATGTCGCAAACT",15,3.32,NA,NA,NA,NA,NA,NA,"stop","Y35L S41* C49T K56L E135W",5
"lib2","SARS-CoV-2","CACTATGTGGTAAGTC",24,0.23,NA,NA,NA,NA,NA,NA,"stop","G155* L162P",2
"lib2","SARS-CoV-2","CACTATGTTGTGATTA",9,1.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","CACTATTCCACCAAAT",5,180.81,10.73,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","CACTATTCCAGTACCT",2,10.12,10.44,-0.4,0.06,2.93,1.02,0,">1 nonsynonymous","G9F D75Q S200V",3
"lib2","SARS-CoV-2","CACTATTCTCTGATCG",10,3.89,NA,NA,NA,NA,NA,NA,"stop","S45* P96Q",2
"lib2","SARS-CoV-2","CACTATTTACGACAAA",2,20.65,10.33,-0.51,0.07,2.95,1.04,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","CACTATTTCGTCCCCA",5,199.36,10.81,-0.02,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTATTTTGTCGGGT",7,77.8,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R16V G116I R127S Y143T",4
"lib2","SARS-CoV-2","CACTCAAACAATAATT",1,79.73,10.37,-0.47,0.04,2.98,1.01,0,">1 nonsynonymous","D59E N107S",2
"lib2","SARS-CoV-2","CACTCAAACACATATG",2,34.55,6.57,-4.27,0.45,1.5,1.17,0.02,">1 nonsynonymous","G9L D68A",2
"lib2","SARS-CoV-2","CACTCAAACATCACAA",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L L95T G116L T148M",4
"lib2","SARS-CoV-2","CACTCAAACTCTTAAC",2,11.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V Y123F E141D",3
"lib2","SARS-CoV-2","CACTCAAAGTATGTCG",11,190.62,8.43,-2.4,0.09,2.7,1.08,0,">1 nonsynonymous","Y39R S45H N157T",3
"lib2","SARS-CoV-2","CACTCAAATAAATCCG",12,26.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S43V N92W C102Q G196Q",4
"lib2","SARS-CoV-2","CACTCAACACGATATT",2,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146E F160V",2
"lib2","SARS-CoV-2","CACTCAAGCGAACAAA",9,11.47,NA,NA,NA,NA,NA,NA,"stop","G9Q V20G C49I Q84M V103*",5
"lib2","SARS-CoV-2","CACTCAAGTACTAAGT",1,38.02,10.18,-0.65,0.08,2.68,1.03,0,">1 nonsynonymous","T3N F99L",2
"lib2","SARS-CoV-2","CACTCAAGTAGGCATA",8,115.01,10.27,-0.56,0.04,2.89,1.06,0,">1 nonsynonymous","I2N Y35G V52L",3
"lib2","SARS-CoV-2","CACTCAATCTAACCCC",5,33.9,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A33S P54T L95F K128C",4
"lib2","SARS-CoV-2","CACTCACAAGTTATAT",2,24.09,9.8,-1.03,0.12,2.12,1.03,0.01,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","CACTCACACTTATAAG",8,65.54,8.6,-2.23,0.2,1.83,1.14,0.02,">1 nonsynonymous","V77K K87Q",2
"lib2","SARS-CoV-2","CACTCACATTGGAAAA",3,62.32,8.89,-1.95,0.08,2.47,1.11,0,">1 nonsynonymous","T63M N107C T170Q",3
"lib2","SARS-CoV-2","CACTCACCACAAAAAA",1,17.34,9.73,-1.1,0.17,2.14,1.1,0.01,">1 nonsynonymous","K26V P96C F160S",3
"lib2","SARS-CoV-2","CACTCACGGAACTACG",3,21.55,10.74,-0.1,0.06,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTCACGTTGCGTCA",3,11.13,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G51Q V52L I72E N92A K198W",5
"lib2","SARS-CoV-2","CACTCACTACCTACAT",17,5.3,NA,NA,NA,NA,NA,NA,"stop","V65R D98F L122K E141T L188E T201*",6
"lib2","SARS-CoV-2","CACTCAGAATAATTGT",9,2.11,NA,NA,NA,NA,NA,NA,"stop","K94S G152* L162S",3
"lib2","SARS-CoV-2","CACTCAGGAGCCATAC",4,122.51,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y39K G101M L131F T170N",4
"lib2","SARS-CoV-2","CACTCAGGATAACTTA",4,17.83,9.08,-1.76,0.23,1.69,1.04,0.03,"1 nonsynonymous","W23Q",1
"lib2","SARS-CoV-2","CACTCAGTCCATTACT",7,4.56,NA,NA,NA,NA,NA,NA,"stop","A14P L38* A67Y",3
"lib2","SARS-CoV-2","CACTCAGTTGAAAAGC",6,233.89,10.79,-0.05,0.04,2.87,1.14,0,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","CACTCAGTTTAAGATA",6,71.21,9.5,-1.34,0.17,1.7,1.13,0.01,">1 nonsynonymous","T63M D90C D97A E154T",4
"lib2","SARS-CoV-2","CACTCATTCACTCGTA",1,25.18,10.83,-0.01,0.07,2.95,1.07,0,"1 nonsynonymous","Y66T",1
"lib2","SARS-CoV-2","CACTCCAAAATACCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95R N151*",2
"lib2","SARS-CoV-2","CACTCCAACTCAAATC",2,5.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61P E154P C158Y",3
"lib2","SARS-CoV-2","CACTCCAAGATGTTGC",2,81.67,10.79,-0.05,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTCCAAGTGACCAA",6,22.49,8.31,-2.53,0.28,1.5,1,0.04,">1 nonsynonymous","A14F S139Y",2
"lib2","SARS-CoV-2","CACTCCAAGTGCAAAG",7,55.33,10.58,-0.26,0.07,2.98,1.05,0,">1 nonsynonymous","S29F V37L D90N",3
"lib2","SARS-CoV-2","CACTCCAATCATTTAC",2,25.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1V A105F S129T E135G",4
"lib2","SARS-CoV-2","CACTCCACTCAAACTG",3,38.68,9.33,-1.51,0.09,1.84,1.04,0,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","CACTCCACTCCAACCA",4,29.41,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","K94A S139P N157D Y175F",4
"lib2","SARS-CoV-2","CACTCCACTCCACAAA",4,31.45,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31T D112M Y119A R136L",4
"lib2","SARS-CoV-2","CACTCCAGCAGAACAT",10,52.15,9.85,-0.99,0.07,2.31,1.02,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","CACTCCAGGAGAATAA",5,42.12,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T46F L60T D90Y V103T L122I G155C",6
"lib2","SARS-CoV-2","CACTCCAGTCCATGAA",10,26.44,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","V20T S45F F62T V103N F167G",5
"lib2","SARS-CoV-2","CACTCCATATGCATAA",3,57.73,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","N64E S113L C158M K199N",4
"lib2","SARS-CoV-2","CACTCCATCTCTACTG",1,26.96,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","N13C P177V E186D",3
"lib2","SARS-CoV-2","CACTCCATTACGTTCA",2,17.69,9.72,-1.11,0.1,2.79,1.07,0.01,">1 nonsynonymous","T3L A33T P169F",3
"lib2","SARS-CoV-2","CACTCCCATCTTTAGG",8,83.47,10.52,-0.31,0.04,2.97,1,0,">1 nonsynonymous","T85L T201E",2
"lib2","SARS-CoV-2","CACTCCCCAGAAGAGT",1,16.29,6.47,-4.37,0.62,1.5,1.17,0.04,">1 nonsynonymous","K56S D98L D112H N120R Q168Y",5
"lib2","SARS-CoV-2","CACTCCGGATGATTAT",2,7.85,10.82,-0.02,0.18,3,1.03,0,">1 nonsynonymous","A81S V115L",2
"lib2","SARS-CoV-2","CACTCCGGCGAACATG",9,19.12,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","N1L F62A Q84L P96V V153S V180A",6
"lib2","SARS-CoV-2","CACTCCGGGTTCTCGA",1,8.79,10.47,-0.37,0.09,2.95,1.05,0,"1 nonsynonymous","F44K",1
"lib2","SARS-CoV-2","CACTCCGTTAAGTAAG",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S D90Y K132Q P149M C158H",5
"lib2","SARS-CoV-2","CACTCCTATGCAATAA",1,11.63,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A42I K56S V77P",3
"lib2","SARS-CoV-2","CACTCCTCAAGACGCA",3,16.5,7.67,-3.17,0.27,1.5,1.07,0.03,">1 nonsynonymous","D59L L60V G83V V173Y",4
"lib2","SARS-CoV-2","CACTCCTGAAGCTTAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","V20N F126* S147F",3
"lib2","SARS-CoV-2","CACTCGAACGAGAAAA",11,229.19,10.75,-0.09,0.03,2.94,1.07,0,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","CACTCGAAGTCCCATA",2,75.13,9.17,-1.66,0.03,3,1.03,0,"1 nonsynonymous","G166K",1
"lib2","SARS-CoV-2","CACTCGACGACCATCG",7,57.25,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D68R N120I A192T",3
"lib2","SARS-CoV-2","CACTCGATTTATTTCC",20,5.32,NA,NA,NA,NA,NA,NA,"stop","E10G K132M I138K Y175*",4
"lib2","SARS-CoV-2","CACTCGCATAGGAATC",1,14.28,10.28,-0.56,0.12,2.75,1.09,0.01,"1 nonsynonymous","F134K",1
"lib2","SARS-CoV-2","CACTCGCATTCTGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14I T55* I104Y T148R",4
"lib2","SARS-CoV-2","CACTCGCTAAGCGACT",21,443.95,8.01,-2.83,0.12,1.6,1.08,0.01,">1 nonsynonymous","G9E D75G D90G G146D",4
"lib2","SARS-CoV-2","CACTCGGAAATGAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28*",1
"lib2","SARS-CoV-2","CACTCGGTACTCTACG",3,33.36,8.1,-2.74,0.16,2.04,1.07,0.01,">1 nonsynonymous","S69Q I104L G166T",3
"lib2","SARS-CoV-2","CACTCGGTTACATATG",13,33.93,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5Q T15Q F44Y Y50A R179T",5
"lib2","SARS-CoV-2","CACTCGTATGGGATGT",3,106.06,8.83,-2.01,0.08,2.88,1.05,0,">1 nonsynonymous","Y123M G166F",2
"lib2","SARS-CoV-2","CACTCGTCAATAATAG",3,26.95,10.06,-0.77,0.06,2.87,1.1,0,">1 nonsynonymous","C61Y K87L E141V",3
"lib2","SARS-CoV-2","CACTCGTGGTTCTCAA",2,21.01,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F99K K128Y",2
"lib2","SARS-CoV-2","CACTCGTTCACCACCG",1,2.07,NA,NA,NA,NA,NA,NA,"stop","N92* Y143S",2
"lib2","SARS-CoV-2","CACTCTATATAAGAGA",3,80.32,9.49,-1.34,0.05,2,1.04,0,">1 nonsynonymous","W106R G155R L187M T201Q",4
"lib2","SARS-CoV-2","CACTCTGAGCTTGCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1K N13P D90F V103R V153*",5
"lib2","SARS-CoV-2","CACTCTGATACTTTTT",4,6.11,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","S41A P54A V77E Y119K P133L",5
"lib2","SARS-CoV-2","CACTCTTATTGTATTC",2,16.29,8.89,-1.95,0.1,2.09,1.05,0,">1 nonsynonymous","E10L Y121P",2
"lib2","SARS-CoV-2","CACTCTTGGAAACCCA",10,48.64,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8I S53Q I88S E154N E186G",5
"lib2","SARS-CoV-2","CACTCTTTAAAAGATT",6,163.59,10.88,0.04,0.05,2.92,1.09,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","CACTCTTTACAGTTCT",11,50.16,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L95Q Y159A",2
"lib2","SARS-CoV-2","CACTCTTTTAACCCGT",3,6.61,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","A89L W106S D137I A192M",4
"lib2","SARS-CoV-2","CACTGAAAAATAAAAA",1,18.72,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","I28K D137L S164G",3
"lib2","SARS-CoV-2","CACTGAAAAGATAGAT",16,307.21,10.22,-0.62,0.03,2.87,1.03,0,">1 nonsynonymous","L5S E154V",2
"lib2","SARS-CoV-2","CACTGAAACCCGGACA",8,82.27,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T140W E154V L162G F167P P197F",5
"lib2","SARS-CoV-2","CACTGAAATTGAATAA",7,70.78,10.71,-0.13,0.02,2.95,1.04,0,">1 nonsynonymous","I104C K128E S164H",3
"lib2","SARS-CoV-2","CACTGAACCACACCCC",4,101.89,10.63,-0.21,0.04,2.95,1.03,0,"1 nonsynonymous","N4F",1
"lib2","SARS-CoV-2","CACTGAACGGAGTGGC",5,26.98,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F17L W23S D68R G166L",4
"lib2","SARS-CoV-2","CACTGAACGTACTTAC",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P V182L",2
"lib2","SARS-CoV-2","CACTGAACTTAGAAAG",2,34.98,10.4,-0.43,0.05,2.96,1.03,0,">1 nonsynonymous","R78S L183V",2
"lib2","SARS-CoV-2","CACTGAAGATTAGGAT",10,192.28,10.65,-0.19,0.04,2.84,1.14,0,">1 nonsynonymous","I2F E141I",2
"lib2","SARS-CoV-2","CACTGAAGTAAAGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9R F17* P161L G174R S184N",5
"lib2","SARS-CoV-2","CACTGAATAGTGACTC",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P K128Y C150M",3
"lib2","SARS-CoV-2","CACTGAATATAACCGA",6,109.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V77L R127K F167L Q176W",4
"lib2","SARS-CoV-2","CACTGAATCATTAGCT",2,1.14,NA,NA,NA,NA,NA,NA,"stop","K87D E135*",2
"lib2","SARS-CoV-2","CACTGAATGTACGCCA",4,56.04,10.29,-0.55,0.05,2.87,1.05,0,">1 nonsynonymous","L60N A81E",2
"lib2","SARS-CoV-2","CACTGAATTCAACAGG",2,15.05,8.68,-2.16,0.09,2.99,1.12,0,">1 nonsynonymous","R73S G166A",2
"lib2","SARS-CoV-2","CACTGACAAGGAATGA",2,34.18,10.37,-0.47,0.08,2.89,1.08,0,">1 nonsynonymous","G9P K132F L187N",3
"lib2","SARS-CoV-2","CACTGACGCGGATGAT",2,9.37,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","W106R Y121D K128M",3
"lib2","SARS-CoV-2","CACTGAGAAGCCTACA",6,177.87,10.86,0.03,0.04,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CACTGAGTCAATACCG",2,40.51,9.35,-1.48,0.09,1.88,1.04,0,">1 nonsynonymous","P54S R124K",2
"lib2","SARS-CoV-2","CACTGATAATCGCACG",1,16.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S53I L60R G86S S139L A192S K198C",6
"lib2","SARS-CoV-2","CACTGATACCACCATA",5,74.11,10.55,-0.28,0.04,2.88,1.13,0,">1 nonsynonymous","T3L C61P",2
"lib2","SARS-CoV-2","CACTGATACTATTCGG",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T A42L K114H Y123D I142W",5
"lib2","SARS-CoV-2","CACTGATCAAAATGAC",2,12.08,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y93H Y121F G146F",3
"lib2","SARS-CoV-2","CACTGATGACTAAAAA",5,32.68,10.18,-0.66,0.09,2.86,1.08,0.01,">1 nonsynonymous","S43M C61Y E141C V153S",4
"lib2","SARS-CoV-2","CACTGCAAGCCCTTAT",8,35.28,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","G9S T46L K94M I142R",4
"lib2","SARS-CoV-2","CACTGCACCAAGATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S Q144S P197T",3
"lib2","SARS-CoV-2","CACTGCACCGAAAAGG",12,159.66,10.76,-0.08,0.04,2.91,1.09,0,"1 nonsynonymous","T3I",1
"lib2","SARS-CoV-2","CACTGCGATTATAAAA",7,14.56,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","T148V L183G",2
"lib2","SARS-CoV-2","CACTGCGGATATATAG",10,3.61,NA,NA,NA,NA,NA,NA,"stop","F17* K199M",2
"lib2","SARS-CoV-2","CACTGCGGTAAGTATA",2,41.94,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R25L I88D L188G",3
"lib2","SARS-CoV-2","CACTGCTGTTATAACT",24,308.17,10.75,-0.09,0.03,2.95,1.05,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CACTGGAAAGCCCGTG",8,81.17,10.39,-0.45,0.05,2.84,1.09,0,">1 nonsynonymous","D34C Q163L",2
"lib2","SARS-CoV-2","CACTGGAAATTATTCT",3,48.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6L D59P Y165V",3
"lib2","SARS-CoV-2","CACTGGAACTCGTTTG",2,34.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K87S D97V D112H",3
"lib2","SARS-CoV-2","CACTGGAATATATACT",14,185.03,10.26,-0.58,0.02,2.86,1.06,0,">1 nonsynonymous","S41V I104C",2
"lib2","SARS-CoV-2","CACTGGAATCCATAGC",4,33.76,10.74,-0.09,0.07,2.97,1.05,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","CACTGGACATCCAAGT",3,41.75,9.86,-0.98,0.07,2.25,1.07,0,">1 nonsynonymous","F8M R136T",2
"lib2","SARS-CoV-2","CACTGGACGGGTACAA",7,6.54,8.24,-2.6,0.21,1.72,1.16,0.01,">1 nonsynonymous","W23S I72L",2
"lib2","SARS-CoV-2","CACTGGACGTCTAGCC",1,10.31,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","T55Y F62M L95N G152S",4
"lib2","SARS-CoV-2","CACTGGAGTCCAAACA",1,3.03,NA,NA,NA,NA,NA,NA,"stop","N13H N92* N130L",3
"lib2","SARS-CoV-2","CACTGGATAGATTCTG",1,9.53,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D68E G86S F99H N118K P149A",5
"lib2","SARS-CoV-2","CACTGGATGTCCCGTG",7,50.06,6.12,-4.71,0.82,1.5,1.14,0.03,">1 nonsynonymous","R25I D97S V115S",3
"lib2","SARS-CoV-2","CACTGGCTTTATGTTA",3,107.93,10.86,0.02,0.04,2.92,1.1,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","CACTGGGAAGTAAAAA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","P149H T170*",2
"lib2","SARS-CoV-2","CACTGGGCTATGGACT",3,41.13,10.68,-0.16,0.06,2.9,1.11,0,">1 nonsynonymous","A89S N130A",2
"lib2","SARS-CoV-2","CACTGGTTCTAATGAG",3,110.58,6,-4.84,0.51,1.74,1.11,0,">1 nonsynonymous","L95I F99L Y175S K198P",4
"lib2","SARS-CoV-2","CACTGTACATCAATCG",2,11.7,6.48,-4.36,0.53,1.5,1.04,0.03,">1 nonsynonymous","G83C T100S W106L",3
"lib2","SARS-CoV-2","CACTGTAGCCACTATG",5,86.14,7.53,-3.3,0.23,1.5,1.12,0.02,">1 nonsynonymous","N40F Y119M R136V T201P",4
"lib2","SARS-CoV-2","CACTGTAGCCATACAA",23,290.8,10.11,-0.72,0.04,2.71,1.03,0,">1 nonsynonymous","S41F S69F",2
"lib2","SARS-CoV-2","CACTGTCAAATTCCAA",4,199.65,9,-1.84,0.06,2.23,1.08,0,">1 nonsynonymous","E141R P177S",2
"lib2","SARS-CoV-2","CACTGTCATAATATAT",4,115.27,10.24,-0.6,0.05,2.73,1.13,0,">1 nonsynonymous","V180M K198A",2
"lib2","SARS-CoV-2","CACTGTCTAGCATGAA",5,51.11,6.22,-4.62,0.53,1.5,1.16,0.01,">1 nonsynonymous","F44N A89R",2
"lib2","SARS-CoV-2","CACTGTGAGTTAGGAA",1,147.71,9.73,-1.11,0.05,2.77,1.07,0,"1 nonsynonymous","G146Y",1
"lib2","SARS-CoV-2","CACTGTGGACGACTTG",14,277.01,10.95,0.11,0.06,2.95,1.06,0,">1 nonsynonymous","T100F S164R P197E",3
"lib2","SARS-CoV-2","CACTGTGGGTACCGCA",10,159.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16D F156D T170I",3
"lib2","SARS-CoV-2","CACTGTGGTATTGAAG",6,44.04,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S29W A105P D137A L183A",4
"lib2","SARS-CoV-2","CACTGTGTGCATCGCA",13,129.55,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C6N R27T D34V G116S S164I",5
"lib2","SARS-CoV-2","CACTGTTATTCAGATA",18,316.33,10.82,-0.02,0.05,2.93,1.07,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","CACTGTTTAGGCGGAT",5,14.21,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","L60R N151L N157V",3
"lib2","SARS-CoV-2","CACTTAAAATTTATAT",8,74.31,10.2,-0.64,0.03,2.86,1.05,0,">1 nonsynonymous","Y35N N120K",2
"lib2","SARS-CoV-2","CACTTAAACCACAGCT",2,43.96,10.35,-0.49,0.07,2.72,1.11,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","CACTTAACAAAGCATT",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R E141G",2
"lib2","SARS-CoV-2","CACTTAACACATAAAC",7,78.46,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D59I D68A A81M P149R N157A",5
"lib2","SARS-CoV-2","CACTTAACCAAATACA",8,0.45,NA,NA,NA,NA,NA,NA,"stop","A14H V37N L95H Y119L T148* Q168G P177S A190E",8
"lib2","SARS-CoV-2","CACTTAACGCACTAGC",11,43.9,9.08,-1.75,0.12,1.55,1.09,0.01,">1 nonsynonymous","N4S Y50R",2
"lib2","SARS-CoV-2","CACTTAACTGGCACCA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D D112T",2
"lib2","SARS-CoV-2","CACTTAACTGTACAAT",2,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y N92Y A105Y G116F F167L",5
"lib2","SARS-CoV-2","CACTTAAGCTGATCGA",1,100.28,6.62,-4.21,0.18,1.73,1.15,0,">1 nonsynonymous","R16H N58M C150S P197S",4
"lib2","SARS-CoV-2","CACTTAAGTTCGAGCT",6,41.51,9.38,-1.46,0.11,2.3,1.05,0.01,">1 nonsynonymous","S129L P161S",2
"lib2","SARS-CoV-2","CACTTAATAAACATAA",4,2.01,NA,NA,NA,NA,NA,NA,"stop","Y121L P133*",2
"lib2","SARS-CoV-2","CACTTAATGAAACGAG",8,58.75,7.4,-3.43,0.28,1.5,1.16,0.02,">1 nonsynonymous","Y39K G86L",2
"lib2","SARS-CoV-2","CACTTACAAAATACTA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","N1* V103S N151S L183T",4
"lib2","SARS-CoV-2","CACTTACAGAACCCTA",1,0.93,NA,NA,NA,NA,NA,NA,"stop","D68* F160T",2
"lib2","SARS-CoV-2","CACTTACAGGGGCCCA",5,31.15,10.73,-0.11,0.09,2.84,1.05,0,">1 nonsynonymous","Y39T D97F V173R",3
"lib2","SARS-CoV-2","CACTTACCATATCTAA",1,0.51,NA,NA,NA,NA,NA,NA,"stop","K26R Q84E K114*",3
"lib2","SARS-CoV-2","CACTTACCTAACATTT",1,20.52,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N64G T85D S129T R179T",4
"lib2","SARS-CoV-2","CACTTACCTATTCCGA",10,0.44,NA,NA,NA,NA,NA,NA,"stop","E10A S36M Q176*",3
"lib2","SARS-CoV-2","CACTTACGAAGCTTAA",2,29.62,10.44,-0.39,0.07,2.92,1.04,0,">1 nonsynonymous","N40P C61Y",2
"lib2","SARS-CoV-2","CACTTACGACCCATAC",3,6.4,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","R78K Y93R I104T",3
"lib2","SARS-CoV-2","CACTTACGCATGCAAA",1,52.5,10.41,-0.43,0.05,2.83,1.16,0,">1 nonsynonymous","G116T V153C",2
"lib2","SARS-CoV-2","CACTTACTCCGACGAG",7,220.97,10.59,-0.25,0.04,2.86,1.12,0,">1 nonsynonymous","T15V T55A",2
"lib2","SARS-CoV-2","CACTTAGAATTGAGCC",8,107.46,9.87,-0.97,0.04,2.97,1.05,0,">1 nonsynonymous","C61H Y143L",2
"lib2","SARS-CoV-2","CACTTAGACCCATACA",1,53.77,6.3,-4.53,0.95,1.5,1.2,0.04,">1 nonsynonymous","D90E C158S",2
"lib2","SARS-CoV-2","CACTTAGGCGCTTTGA",2,20.9,6,-4.84,2,3,1.06,0,">1 nonsynonymous","P7T D68Y W106P K128M A190G",5
"lib2","SARS-CoV-2","CACTTAGTAAATTATG",17,141.57,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C158W R179E",2
"lib2","SARS-CoV-2","CACTTAGTTTATAATG",1,0.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CACTTATACAATTGAA",5,43.01,6,-4.84,2,3,1.14,0,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","CACTTATACTTTATAC",3,71.47,10.75,-0.09,0.05,2.89,1.13,0,"1 nonsynonymous","N4H",1
"lib2","SARS-CoV-2","CACTTATCCGATCAAA",1,21,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10R C31F G51M F156Y V173F Y178E",6
"lib2","SARS-CoV-2","CACTTATCCTAACAAA",2,31.66,10.79,-0.05,0.03,2.98,1.02,0,">1 nonsynonymous","S41I Q163F",2
"lib2","SARS-CoV-2","CACTTATGGATGGTCG",4,60.98,9.2,-1.64,0.07,2.66,1.08,0,">1 nonsynonymous","S45D E141T Y165H",3
"lib2","SARS-CoV-2","CACTTATGGCGAACAC",4,33.19,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","W23I N30W D97H V103T",4
"lib2","SARS-CoV-2","CACTTATTACATCGAA",9,15.12,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","S41F P96L A105P",3
"lib2","SARS-CoV-2","CACTTATTCCAGGGTC",6,2.58,NA,NA,NA,NA,NA,NA,"stop","D34S P82* R136V P161L",4
"lib2","SARS-CoV-2","CACTTATTGAAACAAT",6,28.89,6.47,-4.37,0.49,1.5,1.26,0.03,">1 nonsynonymous","N4V A105M S129L Y178E",4
"lib2","SARS-CoV-2","CACTTATTGTATACCA",10,107.14,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F62W G86I A105T I142P",4
"lib2","SARS-CoV-2","CACTTCAACATAAACA",4,13.97,10.54,-0.3,0.04,2.97,1.03,0,">1 nonsynonymous","V37R C61G",2
"lib2","SARS-CoV-2","CACTTCAACCCTAAAA",3,29.24,10.71,-0.12,0.02,2.99,1,0,"1 nonsynonymous","T148W",1
"lib2","SARS-CoV-2","CACTTCAAGATATGCA",12,3.55,NA,NA,NA,NA,NA,NA,"stop","W23L S36E F99V V103A W106I P149* C158L",7
"lib2","SARS-CoV-2","CACTTCACTTGAACAC",1,10.78,6,-4.84,2,3,1.01,0,">1 nonsynonymous","F12D Y21H D112T L122R",4
"lib2","SARS-CoV-2","CACTTCAGAGTAGTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L G146P P197R",3
"lib2","SARS-CoV-2","CACTTCATCGATGCTT",2,13.07,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y121R D137Q V173L",3
"lib2","SARS-CoV-2","CACTTCATTGACAACT",4,146.15,10.82,-0.02,0.04,2.91,1.08,0,"1 nonsynonymous","A192T",1
"lib2","SARS-CoV-2","CACTTCCATACGGGGG",3,5.3,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","V20G R25V D34A F47D T63A D90S G117E K199I",8
"lib2","SARS-CoV-2","CACTTCCCCGAATCAC",4,59.89,10.85,0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTTCGAGCCAATAT",18,237.08,10.71,-0.13,0.03,2.95,1.06,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","CACTTCGATAAAAAAT",10,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38N I80R",2
"lib2","SARS-CoV-2","CACTTCGGCGAACCAG",1,24.14,6,-4.84,2,3,1.06,0,">1 nonsynonymous","V11I Q84S N92R V103C H189V",5
"lib2","SARS-CoV-2","CACTTCTAAAACTAAA",1,32.75,10.84,0.01,0.12,2.87,1.13,0.01,">1 nonsynonymous","F160N T201C",2
"lib2","SARS-CoV-2","CACTTCTATGACTCCT",5,32.48,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L122P V180T T201Q",3
"lib2","SARS-CoV-2","CACTTCTATTAAAGAT",1,67.65,10.56,-0.27,0.06,2.83,1.09,0,">1 nonsynonymous","L5T S45T Y91L",3
"lib2","SARS-CoV-2","CACTTCTTCTCTAGGG",1,8.05,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","N1V V65T Q84T R127N A190K",5
"lib2","SARS-CoV-2","CACTTCTTGTAAACGA",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29Y V37L D90L V103D P149Q",5
"lib2","SARS-CoV-2","CACTTCTTTAGCTAGA",2,7.83,NA,NA,NA,NA,NA,0.58,">1 nonsynonymous","G9V T15Y V20K N92Q N120H E135S E141F C150G V173Y",9
"lib2","SARS-CoV-2","CACTTGAACACTGACT",4,6.92,9.73,-1.11,0.1,2.8,1,0,">1 nonsynonymous","V37E A89N",2
"lib2","SARS-CoV-2","CACTTGAACGTGAATG",1,19.08,10.32,-0.51,0.13,2.63,1,0.01,">1 nonsynonymous","K56W D98K",2
"lib2","SARS-CoV-2","CACTTGAACTGCTCTT",8,49.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T46G T55L P82S K128Y",4
"lib2","SARS-CoV-2","CACTTGAAGCGCGAAT",7,33.59,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G51S C61Q V103R N120T",4
"lib2","SARS-CoV-2","CACTTGAAGGATGATA",6,66.99,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A33R T46A N130Y G152I",4
"lib2","SARS-CoV-2","CACTTGACAAGCTTAT",3,8.55,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","K48P N58Y G74K L95A K128N",5
"lib2","SARS-CoV-2","CACTTGACAGCCAACT",8,28.78,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","V11M G51C C102R N151F",4
"lib2","SARS-CoV-2","CACTTGACCACAGGTG",2,18.33,6.01,-4.82,1.97,1.5,1.38,0.07,">1 nonsynonymous","F70S L95N G117F F160H",4
"lib2","SARS-CoV-2","CACTTGACCCTAGCAC",4,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C V77E",2
"lib2","SARS-CoV-2","CACTTGAGAGCAATAT",3,12.22,9.47,-1.36,0.19,1.83,1.08,0.01,">1 nonsynonymous","Y50R T85H D97L N171Y",4
"lib2","SARS-CoV-2","CACTTGAGGCGCTATT",3,8.21,6.31,-4.53,0.9,1.5,1.27,0.03,">1 nonsynonymous","C49V R136M",2
"lib2","SARS-CoV-2","CACTTGAGTCTATCTC",15,56.54,8.71,-2.13,0.43,1.5,1,0.07,">1 nonsynonymous","N13L S69L",2
"lib2","SARS-CoV-2","CACTTGCACTTGCGAA",6,55.07,8.15,-2.69,0.14,2.22,1.08,0.01,">1 nonsynonymous","A105W G166L",2
"lib2","SARS-CoV-2","CACTTGCAGTCAAGAA",1,8.63,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A22P N107Y F185A",3
"lib2","SARS-CoV-2","CACTTGCGAAAGGGGG",9,53.5,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y121N E135M F167L",3
"lib2","SARS-CoV-2","CACTTGCGGAAATCAT",5,83.23,10.89,0.06,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTTGCTAACCCCAT",9,242.22,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N58M N110G P133R Q176H",4
"lib2","SARS-CoV-2","CACTTGCTCTGTATAC",3,7.18,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","CACTTGGCGAATTATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H Y119N G146T",3
"lib2","SARS-CoV-2","CACTTGGTCAATGAGT",11,47.08,7.26,-3.57,0.35,1.5,1.17,0.05,">1 nonsynonymous","T15C Y91M I138R",3
"lib2","SARS-CoV-2","CACTTGGTTAGAAACG",10,165.1,10.24,-0.6,0.03,2.75,1.07,0,"1 nonsynonymous","A81H",1
"lib2","SARS-CoV-2","CACTTGTCACAAAGGA",6,76.71,9.32,-1.52,0.12,1.73,1.12,0.01,"1 nonsynonymous","Y50R",1
"lib2","SARS-CoV-2","CACTTGTCATGTCGTC",4,65.88,9.46,-1.38,0.06,2.91,1.12,0,">1 nonsynonymous","L5V V32K Y119N",3
"lib2","SARS-CoV-2","CACTTTAAAAACCTGA",6,12.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15R V103L H189M T201V",4
"lib2","SARS-CoV-2","CACTTTAAAACTTAGT",5,31.42,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N13H S19L P54F Y123W",4
"lib2","SARS-CoV-2","CACTTTAACTAATGGA",10,2.57,NA,NA,NA,NA,NA,NA,"stop","L38R C158W P177*",3
"lib2","SARS-CoV-2","CACTTTAATGTACCAT",1,33.1,10.66,-0.17,0.07,2.87,1.16,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","CACTTTACATTATAAC",5,62.56,7.94,-2.89,0.15,1.58,1.08,0.01,">1 nonsynonymous","L5E Y39A D112S",3
"lib2","SARS-CoV-2","CACTTTAGAGCGATTA",3,57.94,8.24,-2.6,0.14,1.69,1.11,0.01,">1 nonsynonymous","S36L I104L E141V G166L",4
"lib2","SARS-CoV-2","CACTTTAGCTAAAATT",2,40.59,10.2,-0.64,0.08,2.81,1.03,0,">1 nonsynonymous","L5S A33E S41A",3
"lib2","SARS-CoV-2","CACTTTATAAGCATCT",13,2.03,NA,NA,NA,NA,NA,NA,"stop","G9H S29F G117P K128F A145* F167I",6
"lib2","SARS-CoV-2","CACTTTCAAAAAGCCG",11,121.76,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25M D90I Y119K T201K",4
"lib2","SARS-CoV-2","CACTTTCCCAGAGATG",9,35.44,6.41,-4.43,0.77,1.5,1.25,0.03,">1 nonsynonymous","T3V E10D V77W P149T",4
"lib2","SARS-CoV-2","CACTTTCTCTTTTACC",5,1.46,NA,NA,NA,NA,NA,NA,"stop","S43T G117* Q176S",3
"lib2","SARS-CoV-2","CACTTTCTGTGGCAAG",4,87.38,10.84,0,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CACTTTGCACTACTAT",1,9.42,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N40C T100P",2
"lib2","SARS-CoV-2","CACTTTGCCGAAGGTA",13,226.12,8.79,-2.04,0.1,2.22,1.11,0,">1 nonsynonymous","Y39E F134H G146N K199N",4
"lib2","SARS-CoV-2","CACTTTGCTAAGATTG",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121I G146Q",2
"lib2","SARS-CoV-2","CACTTTGTTCACCGCA",2,9.72,10.01,-0.83,0.2,2.25,1.04,0.03,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","CACTTTTAAATTCTGG",3,33.85,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G9E W23L Y66R Q84H T140F",5
"lib2","SARS-CoV-2","CACTTTTAAGAAAAAC",2,31.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R Y119H N130L Y143T",4
"lib2","SARS-CoV-2","CACTTTTAGGCGCTGC",2,31.26,9.12,-1.71,0.07,2.92,1.1,0,">1 nonsynonymous","T63L Q168V",2
"lib2","SARS-CoV-2","CACTTTTATCAACTAT",17,323.3,10.22,-0.62,0.03,2.77,1.02,0,"1 nonsynonymous","R136A",1
"lib2","SARS-CoV-2","CACTTTTCACCTTGGG",2,17.69,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F47Y T55M Y93N V103L D112S",5
"lib2","SARS-CoV-2","CACTTTTCCCATGCAA",11,224.29,10.78,-0.06,0.03,2.95,1.07,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","CACTTTTGACGAACAA",5,43.19,9.41,-1.43,0.09,2.44,1.05,0,">1 nonsynonymous","R78L A105S G155A G196W",4
"lib2","SARS-CoV-2","CACTTTTGGAATCACA",7,1.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","CACTTTTGGACTGGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D K48Y G86W",3
"lib2","SARS-CoV-2","CACTTTTTCTGACGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","E10A T15M T100L R127*",4
"lib2","SARS-CoV-2","CAGAAAAAAAAAACAC",3,12.47,6.03,-4.81,1.38,1.5,1.14,0.03,">1 nonsynonymous","S36E C61H N107F T201G",4
"lib2","SARS-CoV-2","CAGAAAAAAATAACAT",4,72.1,7.8,-3.03,0.08,2.51,1.03,0,">1 nonsynonymous","K128S A145V C158K",3
"lib2","SARS-CoV-2","CAGAAAAAATGCACGG",1,17.1,10.92,0.09,0.07,2.98,1.03,0,">1 nonsynonymous","K56S T85R",2
"lib2","SARS-CoV-2","CAGAAAAACCACACCA",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S P82W A105I A145L",4
"lib2","SARS-CoV-2","CAGAAAAAGCCTCTCC",3,57.89,8.72,-2.11,0.09,2.91,1.18,0,">1 nonsynonymous","L122W F156D",2
"lib2","SARS-CoV-2","CAGAAAACAACGAGTT",3,115.92,8.37,-2.47,0.12,2.78,1.05,0.01,">1 nonsynonymous","A14R T170V",2
"lib2","SARS-CoV-2","CAGAAAACAATCCTAT",7,35.34,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S41H N107I Y121E P149I",4
"lib2","SARS-CoV-2","CAGAAAACAATCGAAA",2,67.93,10.17,-0.66,0.04,2.84,1.03,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","CAGAAAACAATGGCGT",4,61.23,10.21,-0.62,0.05,2.86,1,0,"1 nonsynonymous","T46G",1
"lib2","SARS-CoV-2","CAGAAAACACACCAGA",6,85.62,10.76,-0.07,0.04,2.95,1.05,0,">1 nonsynonymous","T100Y L122V P149R",3
"lib2","SARS-CoV-2","CAGAAAACACTGTTAG",1,23.54,6.14,-4.69,0.69,1.5,1.12,0.01,">1 nonsynonymous","V115M R127L Y178L",3
"lib2","SARS-CoV-2","CAGAAAACAGAGATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","P54G D90T L162S T170*",4
"lib2","SARS-CoV-2","CAGAAAACCAAAATAC",2,24.63,10.81,-0.02,0.05,2.92,1.09,0,">1 nonsynonymous","T3G K199H",2
"lib2","SARS-CoV-2","CAGAAAACCAAAGTAA",7,119.59,10.27,-0.56,0.04,2.87,1.01,0,">1 nonsynonymous","S36A G83K D90C S113A",4
"lib2","SARS-CoV-2","CAGAAAACCAACTCCA",8,168.7,10.62,-0.22,0.04,2.88,1.09,0,">1 nonsynonymous","T3R R78E",2
"lib2","SARS-CoV-2","CAGAAAACCCAGAGGG",3,64.29,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G74C L122T Y175T",3
"lib2","SARS-CoV-2","CAGAAAACGACAATAT",9,26.22,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N13A R27S A42R S139C T170I",5
"lib2","SARS-CoV-2","CAGAAAACTATGGGAC",4,103.3,10.16,-0.68,0.06,2.76,1.02,0,">1 nonsynonymous","D98R P133S",2
"lib2","SARS-CoV-2","CAGAAAACTCTGTGTG",2,38.6,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","P7A Y35P P82Q F99D C150L S164C",6
"lib2","SARS-CoV-2","CAGAAAACTGCTACTA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","G86D D98F L125F G166*",4
"lib2","SARS-CoV-2","CAGAAAAGAATAACAT",4,26.71,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","C61A L122P R136S P149M",4
"lib2","SARS-CoV-2","CAGAAAAGTATCTGCT",12,121.56,10.79,-0.05,0.04,2.91,1.08,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","CAGAAAAGTATTGTAA",7,104.52,10.78,-0.05,0.04,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAAAATAAACGAGT",2,13.6,9.64,-1.2,0.13,2.25,1,0.01,">1 nonsynonymous","G9I A42T S139R Q144P",4
"lib2","SARS-CoV-2","CAGAAAATACCCGTTA",1,15.9,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F12K V65L P133L I142A F156L",5
"lib2","SARS-CoV-2","CAGAAAATATAAAGCC",2,7.43,6.19,-4.65,1.39,3,1.17,0.06,">1 nonsynonymous","V71H K87T T100A N151L",4
"lib2","SARS-CoV-2","CAGAAACACAGCATAA",2,46.14,10.54,-0.3,0.05,2.98,1,0,"1 nonsynonymous","N58I",1
"lib2","SARS-CoV-2","CAGAAACACTATTGCA",3,11.65,10.8,-0.04,0.1,2.79,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAAACAGATCAAGC",3,30.35,6.51,-4.33,0.3,1.5,1.1,0.01,">1 nonsynonymous","L57H Y123W Y143L",3
"lib2","SARS-CoV-2","CAGAAACAGGTGACTA",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L A14Y C61T D97S N107I",5
"lib2","SARS-CoV-2","CAGAAACATCGCTGGA",5,124.64,9.66,-1.17,0.04,2.86,1.09,0,">1 nonsynonymous","K56S Y143V",2
"lib2","SARS-CoV-2","CAGAAACATGAAAATA",1,0.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","CAGAAACCCAGGCTGA",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S D98Q Q144G C158L",4
"lib2","SARS-CoV-2","CAGAAACCTTTGATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15N W23E S41L T63N L95P Y165*",6
"lib2","SARS-CoV-2","CAGAAACGATACTCAG",2,106.58,10.84,0.01,0.05,2.91,1.11,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","CAGAAACTACAAGGGA",1,18.47,6.76,-4.08,0.39,1.5,1.1,0.02,">1 nonsynonymous","Y35S D68V",2
"lib2","SARS-CoV-2","CAGAAACTGGCGAGAA",4,49.81,6,-4.84,2,2.9,1.14,0,">1 nonsynonymous","I2L A81L D90V",3
"lib2","SARS-CoV-2","CAGAAACTTCTCATGC",4,9.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D34R S53R D90L P96M Y119L T140F",6
"lib2","SARS-CoV-2","CAGAAAGAGCGAGACG",11,14.39,9.89,-0.94,0.29,1.57,1.1,0.06,">1 nonsynonymous","I2P A89T L183R",3
"lib2","SARS-CoV-2","CAGAAAGATACAAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","V115* T170L",2
"lib2","SARS-CoV-2","CAGAAAGCAGGAGGTA",5,147.3,10.35,-0.49,0.04,2.95,1.08,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CAGAAAGGACCTTTAA",2,50.09,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S19M C61G Y165H",3
"lib2","SARS-CoV-2","CAGAAAGGCGGCAACT",4,40.47,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N40F G83V G166W",3
"lib2","SARS-CoV-2","CAGAAAGTCATACGAC",2,16.47,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15A S45G D68L Y121W L183C",5
"lib2","SARS-CoV-2","CAGAAAGTGAATAAGA",6,110.65,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","CAGAAAGTTGGGAGAG",3,45.99,6,-4.84,0.82,3,1.04,0,">1 nonsynonymous","N107P P149V Y165I S200D",4
"lib2","SARS-CoV-2","CAGAAAGTTTCATCAC",1,6.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R I104Y",2
"lib2","SARS-CoV-2","CAGAAATAAACACTTA",3,22.25,10.87,0.03,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAAATAATCAGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W L38D S69K",3
"lib2","SARS-CoV-2","CAGAAATAGTTAACCA",4,35.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7V E76R P133W",3
"lib2","SARS-CoV-2","CAGAAATATAGAATAC",8,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","CAGAAATATTATATCC",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R Y35E D98C T170D",4
"lib2","SARS-CoV-2","CAGAAATATTTAAACA",1,57.42,10.94,0.11,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAAATCACAATCAA",9,312.86,8.94,-1.89,0.06,2.52,1.12,0,">1 nonsynonymous","V52G F156T",2
"lib2","SARS-CoV-2","CAGAAATCCCATTACA",11,68.58,8.14,-2.69,0.17,1.5,1.02,0.01,">1 nonsynonymous","P7T K56S N107I",3
"lib2","SARS-CoV-2","CAGAAATCGGATGTCC",12,132.26,10.66,-0.18,0.02,2.92,1.07,0,">1 nonsynonymous","N1R A42C G51K T55L L122K S200C",6
"lib2","SARS-CoV-2","CAGAAATCGTTGTACA",4,10.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K G83L I104S T170H",4
"lib2","SARS-CoV-2","CAGAAATGAGTGCCAA",2,55.51,9.54,-1.3,0.09,2.17,1.05,0,">1 nonsynonymous","V37L G86S",2
"lib2","SARS-CoV-2","CAGAAATGCCTCCACT",2,1.39,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CAGAAATTTCATCCCT",7,124.85,8.66,-2.18,0.13,1.5,1.11,0.01,">1 nonsynonymous","S36C L57G T140A",3
"lib2","SARS-CoV-2","CAGAAATTTGTTGAAC",6,24.56,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N4Y Q84D T140R V153S R179G",5
"lib2","SARS-CoV-2","CAGAAATTTTTTCGCA",5,58.54,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G9K N13F Q176I",3
"lib2","SARS-CoV-2","CAGAACAAATCGACTA",9,85.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G83A Y93P",2
"lib2","SARS-CoV-2","CAGAACAACGACACAA",2,60.09,9.29,-1.55,0.07,2.33,1.14,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","CAGAACAAGCTATTAA",2,23.86,6.4,-4.43,0.52,1.5,1.08,0.02,">1 nonsynonymous","S43N A67V D68K L122V",4
"lib2","SARS-CoV-2","CAGAACAAGTTACTAA",5,0.99,NA,NA,NA,NA,NA,NA,"stop","C6* L57D",2
"lib2","SARS-CoV-2","CAGAACAATACCTTGG",1,8.06,7.71,-3.13,0.36,1.5,1.12,0.03,">1 nonsynonymous","S19T S45F T55F",3
"lib2","SARS-CoV-2","CAGAACAATTCAAACC",2,30.63,9.5,-1.34,0.24,1.67,1.12,0.02,">1 nonsynonymous","T85G A105L F160Y Q168H",4
"lib2","SARS-CoV-2","CAGAACACACTGCTGA",5,20.76,10.51,-0.32,0.07,2.96,1.02,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","CAGAACACTCCAACAT",6,85.79,9.48,-1.36,0.04,2.74,1.09,0,">1 nonsynonymous","N118L S200D",2
"lib2","SARS-CoV-2","CAGAACAGAAAAGGTA",1,0.69,NA,NA,NA,NA,NA,NA,"stop","K94F I104* P177A",3
"lib2","SARS-CoV-2","CAGAACAGATAGATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9N L57* G101F S129C",4
"lib2","SARS-CoV-2","CAGAACAGCAATTACA",8,121.1,10.68,-0.15,0.06,2.88,1.07,0,">1 nonsynonymous","L60G N64I",2
"lib2","SARS-CoV-2","CAGAACAGTGAACTAC",7,32.92,10.88,0.04,0.05,2.97,1.04,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","CAGAACATAAATTAAT",10,282.52,10.7,-0.13,0.03,2.93,1.06,0,">1 nonsynonymous","D98T Q163L",2
"lib2","SARS-CoV-2","CAGAACATAACCGACA",8,60.33,10.87,0.04,0.06,2.96,1.05,0,"1 nonsynonymous","N40Q",1
"lib2","SARS-CoV-2","CAGAACATCACCGCAT",5,35.4,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y91H N107L",2
"lib2","SARS-CoV-2","CAGAACATTAATCGGA",3,46.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G T63M I72S R124Y",4
"lib2","SARS-CoV-2","CAGAACCCATAGGATA",1,0.71,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib2","SARS-CoV-2","CAGAACCCCCTATTTG",4,81.09,9.83,-1,0.07,2.37,1.05,0,">1 nonsynonymous","N24I N58L K87H",3
"lib2","SARS-CoV-2","CAGAACCCCTACACCG",1,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M I80E D97N K128V",4
"lib2","SARS-CoV-2","CAGAACCGACCAACAG",2,0.38,NA,NA,NA,NA,NA,NA,"stop","F17M Y39* F156T",3
"lib2","SARS-CoV-2","CAGAACCTAGTTCAAG",12,33.73,6.17,-4.67,1.06,1.5,1.16,0.05,"1 nonsynonymous","F70W",1
"lib2","SARS-CoV-2","CAGAACCTCACAAAAA",2,5.11,6,-4.84,2,3,1.06,0,">1 nonsynonymous","F12K R27L V37I Y50N N107A",5
"lib2","SARS-CoV-2","CAGAACGAACGATGAA",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83C Q163W",2
"lib2","SARS-CoV-2","CAGAACGATAATACGG",3,16.61,7.72,-3.11,0.24,1.5,1.24,0.03,">1 nonsynonymous","I28K S139L",2
"lib2","SARS-CoV-2","CAGAACGCAACCTAAA",5,7.77,NA,NA,NA,NA,NA,NA,"stop","F44L L60* K94V",3
"lib2","SARS-CoV-2","CAGAACGCCAAATCGC",6,7.31,9.1,-1.73,0.46,2.29,1,0.04,">1 nonsynonymous","C6V R25W A42P N107Y",4
"lib2","SARS-CoV-2","CAGAACGGTTGATGTA",7,110.67,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6K Y159T",2
"lib2","SARS-CoV-2","CAGAACGTGACTCGCA",10,230.11,9.51,-1.33,0.04,2.89,1.12,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","CAGAACTAAGACAATT",6,121.07,9.52,-1.31,0.06,2.71,1.07,0,">1 nonsynonymous","T3K P177S",2
"lib2","SARS-CoV-2","CAGAACTCATTGTCTG",6,0.11,NA,NA,NA,NA,NA,NA,"stop","G86C Y123* R136V P149D L162R",5
"lib2","SARS-CoV-2","CAGAACTCGTATGCTA",13,190.36,9.88,-0.95,0.07,2.43,1.06,0,">1 nonsynonymous","F12L F185I",2
"lib2","SARS-CoV-2","CAGAAGAAAATATCTA",1,14.9,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A14N S113N P161M T201N",4
"lib2","SARS-CoV-2","CAGAAGACCAAACCAC",2,50.57,10.93,0.1,0.06,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGAAGACCCGCAAAC",14,91.67,6.23,-4.61,0.63,1.5,1.18,0.02,">1 nonsynonymous","S36L G101V",2
"lib2","SARS-CoV-2","CAGAAGATGATATTTC",9,11.99,NA,NA,NA,NA,NA,NA,"stop","S69L G83* V103L",3
"lib2","SARS-CoV-2","CAGAAGATTCCATATA",12,115.48,6.29,-4.55,0.23,1.66,1.15,0,">1 nonsynonymous","N109R C150S",2
"lib2","SARS-CoV-2","CAGAAGCAAGAACTTG",4,6.07,NA,NA,NA,NA,NA,NA,"stop","E10* G101V W106E Q168L G174R",5
"lib2","SARS-CoV-2","CAGAAGCACAGACCAA",4,45.69,10.7,-0.13,0.03,2.96,1.04,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","CAGAAGCCTGCATAGA",2,95.05,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CAGAAGCGATTCCTGG",3,11.6,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V52Y P82I S113T",3
"lib2","SARS-CoV-2","CAGAAGCGCTGACTCA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","N58* P96Q V103Y",3
"lib2","SARS-CoV-2","CAGAAGCTGCGCCCTA",9,171.05,10.9,0.06,0.04,2.94,1.05,0,"1 nonsynonymous","S164T",1
"lib2","SARS-CoV-2","CAGAAGCTGGCGCTAA",8,115.76,10.7,-0.13,0.03,2.92,1.08,0,">1 nonsynonymous","F8L C61D",2
"lib2","SARS-CoV-2","CAGAAGGAACGGACTA",1,14.66,7.93,-2.9,0.37,1.5,1.1,0.04,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","CAGAAGGAACTACGTA",8,76.33,9.4,-1.43,0.04,1.94,1.05,0,">1 nonsynonymous","C6S P96N",2
"lib2","SARS-CoV-2","CAGAAGGCAAGCGGTG",7,45.75,9.81,-1.03,0.12,2.18,1.09,0.01,">1 nonsynonymous","N1R K48H K94N",3
"lib2","SARS-CoV-2","CAGAAGGCTATACAAC",3,84.19,6.08,-4.76,1.33,1.5,1.31,0.04,">1 nonsynonymous","L5S G86E N171Y Y178N",4
"lib2","SARS-CoV-2","CAGAAGGGAGCAATAA",7,66.19,10.9,0.07,0.08,2.89,1.11,0,">1 nonsynonymous","V37A S200I",2
"lib2","SARS-CoV-2","CAGAAGGGCGAAACAG",4,24.4,9.41,-1.42,0.25,1.57,1.04,0.02,">1 nonsynonymous","N40V D59E F99Y",3
"lib2","SARS-CoV-2","CAGAAGTAATACCGGT",2,31.02,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","R124A N130Q E141V",3
"lib2","SARS-CoV-2","CAGAAGTACTACGGAG",2,5.95,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","V65T A89C L122P",3
"lib2","SARS-CoV-2","CAGAAGTAGAGTCACA",5,76.16,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S19F V71E Y123G",3
"lib2","SARS-CoV-2","CAGAAGTATACATAAG",1,33.32,10.18,-0.66,0.05,2.87,1.05,0,">1 nonsynonymous","S29L C61V E141G",3
"lib2","SARS-CoV-2","CAGAAGTATCGAAATG",8,57.71,8.29,-2.55,0.36,1.5,1.01,0.05,">1 nonsynonymous","C49N K87M",2
"lib2","SARS-CoV-2","CAGAAGTCAGTATAAG",3,94.29,10.26,-0.58,0.04,2.95,1.06,0,">1 nonsynonymous","L5C K87C",2
"lib2","SARS-CoV-2","CAGAAGTCCCCAAATT",4,73.64,10.5,-0.34,0.05,2.96,1.06,0,">1 nonsynonymous","G9L T201L",2
"lib2","SARS-CoV-2","CAGAAGTCGACTATAA",2,8.04,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V11R S41K P96Y I104Y T201D",5
"lib2","SARS-CoV-2","CAGAAGTCGCCCCCAC",11,109.73,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V20W I28E G83H F160K S184E",5
"lib2","SARS-CoV-2","CAGAAGTTAACACTGA",8,28.15,9.31,-1.53,0.22,1.55,1.14,0.02,">1 nonsynonymous","L60A K94R C102L",3
"lib2","SARS-CoV-2","CAGAAGTTAGATTAAA",7,96.18,10.19,-0.64,0.05,2.68,1.05,0,">1 nonsynonymous","Y35N K56C",2
"lib2","SARS-CoV-2","CAGAAGTTTTAAATCC",9,255.78,10.5,-0.34,0.03,2.96,1.02,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","CAGAATAAAAGTAGCA",3,73.75,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2L P54E Y119L N157F",4
"lib2","SARS-CoV-2","CAGAATAAACTAATCT",2,27.2,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N92I C150A",2
"lib2","SARS-CoV-2","CAGAATAACACTCGCA",7,0.25,NA,NA,NA,NA,NA,NA,"stop","S113* A145T",2
"lib2","SARS-CoV-2","CAGAATAACATGCCGA",2,56.59,9.89,-0.95,0.08,2.57,1.07,0,">1 nonsynonymous","A105F V153S",2
"lib2","SARS-CoV-2","CAGAATAACTTAAGTT",4,66.67,6,-4.84,1.7,1.5,1.19,0.01,">1 nonsynonymous","S113D F156N",2
"lib2","SARS-CoV-2","CAGAATAAGTCGCGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1K C61* N64P D112V",4
"lib2","SARS-CoV-2","CAGAATAATAAAAGGC",3,21.73,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G51V P161Q",2
"lib2","SARS-CoV-2","CAGAATAATAAGACGC",2,10.75,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A42Q Y159I P161R Q176P",4
"lib2","SARS-CoV-2","CAGAATAATAGGTCCA",2,26.31,10.25,-0.58,0.11,2.77,1.08,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","CAGAATACAACCCAAT",8,62.24,10.14,-0.7,0.05,2.78,1.04,0,">1 nonsynonymous","Y35A D90K",2
"lib2","SARS-CoV-2","CAGAATATAGATAAAA",5,82.77,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N109D P169S Y175S A190P",4
"lib2","SARS-CoV-2","CAGAATATTTCGGGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N C49N N92K G166M",4
"lib2","SARS-CoV-2","CAGAATCAAGCATGGC",1,0.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50G",1
"lib2","SARS-CoV-2","CAGAATCAGAATTCGT",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A T85L G101H K114Y Y121A F156I",6
"lib2","SARS-CoV-2","CAGAATCAGAGGATTG",8,178.95,9.7,-1.13,0.07,2.57,1.09,0,"1 nonsynonymous","R179K",1
"lib2","SARS-CoV-2","CAGAATCATTTCATTA",10,88.69,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A14Y K56N D90K V103W",4
"lib2","SARS-CoV-2","CAGAATCCAACTCGTA",3,69.5,8.36,-2.48,0.23,1.77,1.19,0.02,">1 nonsynonymous","A105Y G117R T201Y",3
"lib2","SARS-CoV-2","CAGAATCCACTAAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G G9L S19T S41L K56E S113D I142K",7
"lib2","SARS-CoV-2","CAGAATCCAGTAGGGG",1,111.86,10.25,-0.59,0.04,2.88,1.04,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","CAGAATCGAAGATAAA",4,79.45,10.85,0.01,0.06,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAATCTCCATCTAG",5,1.17,NA,NA,NA,NA,NA,NA,"stop","K26* D98H N157T",3
"lib2","SARS-CoV-2","CAGAATCTTCTCGGTC",2,51.77,10.76,-0.08,0.07,2.9,1.05,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CAGAATGAACATACGT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","Y91L V103H Q163*",3
"lib2","SARS-CoV-2","CAGAATGACAGGCGAC",6,26.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L57S A89G R136G",3
"lib2","SARS-CoV-2","CAGAATGAGACCTATT",1,13.93,7.54,-3.29,0.12,2.69,1.09,0,">1 nonsynonymous","V37I Y175K",2
"lib2","SARS-CoV-2","CAGAATGCCGAAGTTT",3,99.99,10.52,-0.32,0.04,2.95,1.06,0,">1 nonsynonymous","P7L T55S",2
"lib2","SARS-CoV-2","CAGAATGCGAATTAAA",3,17.39,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","T85E L95G A190V",3
"lib2","SARS-CoV-2","CAGAATGCTACACGCG",10,91.49,9.01,-1.83,0.16,1.5,1.09,0.01,">1 nonsynonymous","F12E K128V",2
"lib2","SARS-CoV-2","CAGAATGTATGAACTT",8,79.93,6.01,-4.83,0.97,1.5,1.16,0.02,">1 nonsynonymous","V71G V103T N107V K128I",4
"lib2","SARS-CoV-2","CAGAATGTCAATGATA",5,52.87,10.68,-0.16,0.04,2.94,1.08,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","CAGAATTAACAGGGAG",15,198.72,6,-4.84,1.03,1.5,1.24,0.01,">1 nonsynonymous","S36H Y91V Y119L T201D",4
"lib2","SARS-CoV-2","CAGAATTAAGAAGAGA",5,142.28,10.76,-0.08,0.04,2.91,1.08,0,">1 nonsynonymous","P54L N110L",2
"lib2","SARS-CoV-2","CAGAATTACTTACACG",2,12.45,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C31R F99T E141D",3
"lib2","SARS-CoV-2","CAGAATTAGAAAACCT",15,7.9,NA,NA,NA,NA,NA,NA,"stop","R27* A42G T100M",3
"lib2","SARS-CoV-2","CAGAATTAGACGGATG",10,158.49,10.81,-0.03,0.04,2.88,1.14,0,">1 nonsynonymous","D59T N110R K128G L188S",4
"lib2","SARS-CoV-2","CAGAATTATAAGTAGC",5,115.82,6.12,-4.72,0.76,1.5,1.15,0.02,">1 nonsynonymous","E10Y N24S Y178K",3
"lib2","SARS-CoV-2","CAGAATTCCAAACTAG",5,30.16,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","G83F R179I A192H",3
"lib2","SARS-CoV-2","CAGAATTGAGCGTTAG",3,21.09,6,-4.84,1.7,1.5,1.11,0.04,">1 nonsynonymous","F99R T201N",2
"lib2","SARS-CoV-2","CAGAATTGAGCTTATC",2,16.81,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","N24H T85R N92I F99V T201F",5
"lib2","SARS-CoV-2","CAGAATTGTTATAGAA",4,2.39,NA,NA,NA,NA,NA,NA,"stop","I2S G83* R127N S139V L187T",5
"lib2","SARS-CoV-2","CAGAATTTAATCAGAA",1,15.75,10.93,0.1,0.05,2.96,1.06,0,">1 nonsynonymous","K26A K56A L122V",3
"lib2","SARS-CoV-2","CAGAATTTATAGATAA",1,20.09,6,-4.84,1.58,2.5,1.28,0.01,">1 nonsynonymous","W23L L122I",2
"lib2","SARS-CoV-2","CAGACAAAAAGCCAGT",1,31.62,10.02,-0.81,0.08,2.85,1.06,0,">1 nonsynonymous","K56L D97K I142T",3
"lib2","SARS-CoV-2","CAGACAAAACTTAGTA",7,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61E A81E G174Y",3
"lib2","SARS-CoV-2","CAGACAAACCTAAAAA",1,7.3,10.6,-0.24,0.1,2.67,1.37,0.01,"1 nonsynonymous","Y35V",1
"lib2","SARS-CoV-2","CAGACAAATGGGTGTG",7,65.98,6.07,-4.77,0.77,1.5,1.19,0.01,">1 nonsynonymous","G86E S113L Y175V",3
"lib2","SARS-CoV-2","CAGACAAATTACACAT",4,138.33,9.42,-1.42,0.06,2.93,1.05,0,">1 nonsynonymous","C61T F126I N151G",3
"lib2","SARS-CoV-2","CAGACAACATGCCTTC",1,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E D98V K128Y P149L T201R",5
"lib2","SARS-CoV-2","CAGACAACGCAAAGTG",7,57.72,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CAGACAAGCACCGCGT",17,386.6,7.18,-3.65,0.24,1.5,1.09,0.01,">1 nonsynonymous","D112V Y119E P149N T201S",4
"lib2","SARS-CoV-2","CAGACAATGGAAAATA",5,77.77,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","I2T P7T R27P S69W D112K Y119S D137T",7
"lib2","SARS-CoV-2","CAGACACATAACTGAA",2,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","CAGACACCAAACCCAA",3,12.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T Y35K D97H",3
"lib2","SARS-CoV-2","CAGACACGAAAAGGAT",5,67.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N64Q Y91S Y121P",3
"lib2","SARS-CoV-2","CAGACACGCACATATG",3,2.62,NA,NA,NA,NA,NA,NA,"stop","Y39D F156* G166T",3
"lib2","SARS-CoV-2","CAGACACGCGATCTCT",5,21.04,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A22R S45I G86R",3
"lib2","SARS-CoV-2","CAGACACTATTTGGAA",3,44.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L G86Q A105T N120V P161L",5
"lib2","SARS-CoV-2","CAGACAGAACGATGTT",13,233.11,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23A D34E N64L Y123T G172D",5
"lib2","SARS-CoV-2","CAGACAGAACTACGTG",14,202.67,9.56,-1.27,0.05,2.88,1.1,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","CAGACAGACGACCTTT",3,63.1,8.64,-2.2,0.11,2.59,1.05,0,">1 nonsynonymous","N64I Q176S",2
"lib2","SARS-CoV-2","CAGACAGACTAAGATA",2,33.99,10.86,0.02,0.06,2.89,1.12,0,">1 nonsynonymous","S36K N110S",2
"lib2","SARS-CoV-2","CAGACAGAGAGCTAAT",14,94.1,10.84,0,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGACAGATAATTTTG",1,6.03,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","A33E V65L G116P E135M Q176S",5
"lib2","SARS-CoV-2","CAGACAGCGACCCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* N30M N40D D98R F156Q",5
"lib2","SARS-CoV-2","CAGACAGGTATACACT",2,12.06,9.79,-1.05,0.13,2.52,1.01,0.01,">1 nonsynonymous","D90N I138G V173G",3
"lib2","SARS-CoV-2","CAGACAGTCCCCCGGA",4,57.62,8.56,-2.28,0.1,2.99,1.09,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","CAGACAGTCCCTTTTG",10,103.35,9.61,-1.22,0.04,2.95,1.02,0,">1 nonsynonymous","G9C A42E E154V",3
"lib2","SARS-CoV-2","CAGACATAATCACCAT",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W W23M C49F N64Y I88M",5
"lib2","SARS-CoV-2","CAGACATAATCACCCC",6,18.78,9.52,-1.32,0.16,1.85,1.09,0.01,">1 nonsynonymous","P54K Y66R D90G",3
"lib2","SARS-CoV-2","CAGACATCACGTATAA",4,26.92,10.2,-0.64,0.12,2.24,1,0.01,">1 nonsynonymous","F62G Y123W",2
"lib2","SARS-CoV-2","CAGACATGGCGAGACC",4,0,NA,NA,NA,NA,NA,NA,"stop","G9* Y93L N171W T201R",4
"lib2","SARS-CoV-2","CAGACATGTATATACG",9,148.49,9.37,-1.46,0.03,2.93,1.07,0,"1 nonsynonymous","S113C",1
"lib2","SARS-CoV-2","CAGACATGTTAATGAA",15,234.56,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F8C G51S Y165I Y178A",4
"lib2","SARS-CoV-2","CAGACATTCAAGAACG",4,17.01,10.18,-0.65,0.13,2.7,1,0.01,">1 nonsynonymous","P133E L183I",2
"lib2","SARS-CoV-2","CAGACCAAAACGTCGA",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E T63R D97S",3
"lib2","SARS-CoV-2","CAGACCAAACTGACTA",6,50.22,9.26,-1.58,0.1,1.77,1.09,0,">1 nonsynonymous","F99M V103I",2
"lib2","SARS-CoV-2","CAGACCAATAAAATGA",4,12.51,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E76V V77M T85R V103N A145F S164L",6
"lib2","SARS-CoV-2","CAGACCAATGGAAACA",3,30.9,10.06,-0.78,0.07,2.85,1.08,0,">1 nonsynonymous","G83R N107A",2
"lib2","SARS-CoV-2","CAGACCACTTTAAAAC",5,66.76,10.12,-0.71,0.08,2.62,1,0,"1 nonsynonymous","Y91Q",1
"lib2","SARS-CoV-2","CAGACCATCCAAAAAT",1,55.25,10.79,-0.05,0.1,2.84,1.2,0,"1 nonsynonymous","S43P",1
"lib2","SARS-CoV-2","CAGACCATTAGATAAA",2,14.38,6,-4.84,2,1.5,1.11,0.07,">1 nonsynonymous","D90Y I104M S147G F167L P197Q",5
"lib2","SARS-CoV-2","CAGACCATTGCAATAC",3,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97H S139L",2
"lib2","SARS-CoV-2","CAGACCCATAGTCCGG",4,260.01,10.44,-0.4,0.04,2.88,1.06,0,"1 nonsynonymous","Y178Q",1
"lib2","SARS-CoV-2","CAGACCGAAACTTCAC",9,106.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106N F134L",2
"lib2","SARS-CoV-2","CAGACCGAATCACATA",3,115.79,8.1,-2.73,0.17,1.5,1.13,0.01,">1 nonsynonymous","N4R V11L A42S N157W",4
"lib2","SARS-CoV-2","CAGACCGCGCGATTAT",8,3.02,NA,NA,NA,NA,NA,NA,"stop","A33L K56N P96S N110I G155D Q168*",6
"lib2","SARS-CoV-2","CAGACCGTAACACGCA",14,97.95,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2L P7S F17N S53L A81G F99R G117W",7
"lib2","SARS-CoV-2","CAGACCGTTAAAACTT",6,104.81,10.08,-0.76,0.08,2.72,1.03,0,"1 nonsynonymous","L131C",1
"lib2","SARS-CoV-2","CAGACCGTTATAAGCA",1,55.52,10.21,-0.63,0.04,2.89,1.04,0,">1 nonsynonymous","Q144M E154T Q163E",3
"lib2","SARS-CoV-2","CAGACCTCATTGTTAC",3,38.91,7.96,-2.87,0.2,1.61,1.06,0.02,">1 nonsynonymous","F12E G166A",2
"lib2","SARS-CoV-2","CAGACCTCCCACCAAA",5,86.54,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1R P7C T100S L131W P149G Q176R",6
"lib2","SARS-CoV-2","CAGACGAAACAATACG",7,187.55,10.56,-0.27,0.04,2.93,1.07,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","CAGACGAAAGCGTACA",9,61.47,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P7S R25F T100P G172E",4
"lib2","SARS-CoV-2","CAGACGACCTCTTAGA",6,38.44,6,-4.84,1.12,1.5,1.19,0.02,">1 nonsynonymous","R25P T55D K114P",3
"lib2","SARS-CoV-2","CAGACGACTCATAAAC",7,1.73,NA,NA,NA,NA,NA,NA,"stop","V71L G86L K94Q F126L P169*",5
"lib2","SARS-CoV-2","CAGACGATCAAGTTCA",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P G83Y N107L",3
"lib2","SARS-CoV-2","CAGACGATTGGTGCAT",4,0.54,NA,NA,NA,NA,NA,NA,"stop","I2A S19G Y35C L57H G146*",5
"lib2","SARS-CoV-2","CAGACGCAATTGGCCG",7,71.67,10.59,-0.25,0.04,2.96,1.04,0,">1 nonsynonymous","I2V D90N K132Y",3
"lib2","SARS-CoV-2","CAGACGCAGATGAACA",7,67.41,8.46,-2.37,0.15,2.69,1.13,0.01,">1 nonsynonymous","L125K E141F",2
"lib2","SARS-CoV-2","CAGACGCCTTATGCAT",4,23.86,11.15,0.32,0.33,1.5,1,0.06,"wildtype","",0
"lib2","SARS-CoV-2","CAGACGCGCAAGTTTT",5,31.09,7.04,-3.8,0.25,1.5,1.1,0.03,">1 nonsynonymous","V52G L95F N107W T140R",4
"lib2","SARS-CoV-2","CAGACGCGGGAAAGAG",1,24.76,10.64,-0.2,0.08,2.95,1.08,0,"1 nonsynonymous","S184L",1
"lib2","SARS-CoV-2","CAGACGTAAAGGTAGG",1,0.37,NA,NA,NA,NA,NA,NA,"stop","R73M I104* P133*",3
"lib2","SARS-CoV-2","CAGACGTAAATGAAAT",5,133.08,7.26,-3.57,0.19,1.5,1.09,0.01,">1 nonsynonymous","G9A L60Y D68V F156M",4
"lib2","SARS-CoV-2","CAGACGTAATACACGG",5,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L R16G A105Q Y123R T201R",5
"lib2","SARS-CoV-2","CAGACGTACACGATAA",7,38.51,6.41,-4.43,0.6,1.5,1.09,0.03,">1 nonsynonymous","F47L T85Y I142G",3
"lib2","SARS-CoV-2","CAGACGTCAGGGCAAG",11,153.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18M S41P V52L L57G D90T F126G",6
"lib2","SARS-CoV-2","CAGACGTCTTATCCAG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","A14I N64S K128* N151C",4
"lib2","SARS-CoV-2","CAGACGTTATAATTCG",2,19.07,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","D59W P82S T140K",3
"lib2","SARS-CoV-2","CAGACGTTTTTCAGCG",5,5.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K W106H V180S",3
"lib2","SARS-CoV-2","CAGACTAAAACGGATA",2,7.68,6.19,-4.64,0.82,3,1.25,0.03,">1 nonsynonymous","N1M S41V T46C N58M S69M I88S S139G I142T F156G",9
"lib2","SARS-CoV-2","CAGACTAACTAGGTAA",1,10.87,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","A105V N120R P133L K198S",4
"lib2","SARS-CoV-2","CAGACTAAGTCTCCAA",9,130.14,8.12,-2.71,0.15,2.07,1.08,0.01,">1 nonsynonymous","R73E D98T P149S",3
"lib2","SARS-CoV-2","CAGACTACATTACGAA",1,26.37,7.38,-3.45,0.21,1.5,1.05,0.01,">1 nonsynonymous","T46F C61P S113R",3
"lib2","SARS-CoV-2","CAGACTACGTGAACAT",7,73.72,10.52,-0.32,0.05,2.95,1.07,0,">1 nonsynonymous","V37Y G146A",2
"lib2","SARS-CoV-2","CAGACTACTCACTTAC",3,25.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F17V I28K P161K",3
"lib2","SARS-CoV-2","CAGACTAGAGCCTTGT",7,57.45,6.91,-3.93,0.37,1.5,1.19,0.03,">1 nonsynonymous","N4A S43T W106L N120G A145K",5
"lib2","SARS-CoV-2","CAGACTAGTGCTCTTA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","N4W T15K S41V P96* V115L G146Y",6
"lib2","SARS-CoV-2","CAGACTATGATCATCA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22T",1
"lib2","SARS-CoV-2","CAGACTCAACCATAAA",7,43.68,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D90P S108Y",2
"lib2","SARS-CoV-2","CAGACTCAACTATGCA",7,38.75,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y50M T100W W106H Y121T S164P S200D",6
"lib2","SARS-CoV-2","CAGACTCAGTATTTGG",6,74.02,10.43,-0.41,0.08,2.88,1.1,0,">1 nonsynonymous","V32R S53T K87P",3
"lib2","SARS-CoV-2","CAGACTCATAGCCTGG",1,0.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","CAGACTCCATTAACGC",4,13.6,6.67,-4.17,0.61,1.5,1.17,0.05,">1 nonsynonymous","D34T A42E N109R R136L K198S",5
"lib2","SARS-CoV-2","CAGACTCGCACCGTCA",4,122.68,10.83,0,0.04,2.98,1.03,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","CAGACTCGGACCATAA",8,0.54,NA,NA,NA,NA,NA,NA,"stop","N40S P96A I142* P197A",4
"lib2","SARS-CoV-2","CAGACTCTACATGCTT",12,114.06,7.4,-3.43,0.26,1.5,1.12,0.02,"1 nonsynonymous","L162S",1
"lib2","SARS-CoV-2","CAGACTGAAACTACAG",5,35.39,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G9Y R16K D75N D98T N107V K114V",6
"lib2","SARS-CoV-2","CAGACTGACAGTATAT",2,42.06,10.65,-0.19,0.05,2.94,1.03,0,">1 nonsynonymous","K48A N120H T140S",3
"lib2","SARS-CoV-2","CAGACTGATTAGGACG",2,23.85,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","L57M N64G N107E Y159I",4
"lib2","SARS-CoV-2","CAGACTGTCGACAATG",4,117.55,10.86,0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGACTTAAAATTTAT",5,57.26,7.95,-2.89,0.14,1.88,1.13,0.01,">1 nonsynonymous","N58Y A89S T140L F156G",4
"lib2","SARS-CoV-2","CAGACTTATACAGAAA",1,8.78,7.23,-3.6,0.29,1.81,1.11,0.03,">1 nonsynonymous","I104V N107R G116M N151L",4
"lib2","SARS-CoV-2","CAGACTTATTCCGTCA",5,157.18,10.9,0.06,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGAGAAAACCAAATC",11,151.04,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9I I72R",2
"lib2","SARS-CoV-2","CAGAGAAACAAAGCTG",3,18.68,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y143R V180T",2
"lib2","SARS-CoV-2","CAGAGAAAGACTAGAC",4,44.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V103R K114T I142S",3
"lib2","SARS-CoV-2","CAGAGAAGATGGTACA",1,70.79,9.66,-1.18,0.08,1.88,1.11,0,"1 nonsynonymous","D68Y",1
"lib2","SARS-CoV-2","CAGAGAAGGCACAAAC",8,23.87,10.61,-0.22,0.09,3,1,0,">1 nonsynonymous","I104M N120L",2
"lib2","SARS-CoV-2","CAGAGAATACCGCACC",8,106.39,9.15,-1.69,0.13,1.75,1.14,0.01,">1 nonsynonymous","T15I E135V G174N",3
"lib2","SARS-CoV-2","CAGAGAATAGACCACG",5,46.95,8.17,-2.66,0.14,1.5,1.07,0.01,"1 nonsynonymous","Y93M",1
"lib2","SARS-CoV-2","CAGAGAATGGTGGAAG",7,1.37,NA,NA,NA,NA,NA,NA,"stop","S53L G155* R179L",3
"lib2","SARS-CoV-2","CAGAGAATTAAATGAT",8,66.19,6,-4.84,0.56,1.5,1.04,0,">1 nonsynonymous","N58I N157K G174R S200W",4
"lib2","SARS-CoV-2","CAGAGACACATAAGTT",3,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R G101Q N107H N151I",4
"lib2","SARS-CoV-2","CAGAGACAGGTAACAT",1,81,8.31,-2.53,0.1,2.82,1.02,0,">1 nonsynonymous","V37N N157F",2
"lib2","SARS-CoV-2","CAGAGACATCCAAGTA",6,55.61,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V71C A105T S113T S147L",4
"lib2","SARS-CoV-2","CAGAGACCAACCCAAC",4,23.99,6.6,-4.24,0.82,1.5,1.25,0.07,">1 nonsynonymous","P82S L95P",2
"lib2","SARS-CoV-2","CAGAGACCCAAGAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14C N58* L162S V182E",4
"lib2","SARS-CoV-2","CAGAGACTAATTAGCA",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L G9K T15S P96L V103H Y165T",6
"lib2","SARS-CoV-2","CAGAGAGAAAACAATG",5,54.69,10.09,-0.74,0.04,2.87,1.05,0,">1 nonsynonymous","C61K N109I V153C",3
"lib2","SARS-CoV-2","CAGAGAGAAGCAAGAG",16,9.31,NA,NA,NA,NA,NA,NA,"stop","R127* R136C",2
"lib2","SARS-CoV-2","CAGAGAGCAAATTGGA",5,51.69,8.69,-2.15,0.31,1.5,1,0.06,">1 nonsynonymous","E76Y N151I",2
"lib2","SARS-CoV-2","CAGAGAGCCACCAACA",16,80.43,6.19,-4.65,0.78,1.5,1.18,0.02,">1 nonsynonymous","A18T G83W I88M R127G",4
"lib2","SARS-CoV-2","CAGAGAGCCCGCCATG",3,28.34,10.91,0.08,0.07,2.87,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGAGAGGGGATACGG",1,10.5,10.23,-0.61,0.11,2.96,1,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","CAGAGAGTCATAGTAC",2,60.98,10.26,-0.58,0.05,2.94,1,0,">1 nonsynonymous","N58T P149V L187P",3
"lib2","SARS-CoV-2","CAGAGAGTTAAGAATC",1,7.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D90F A145V P149R Y175V",4
"lib2","SARS-CoV-2","CAGAGAGTTCTTACAG",2,37.5,9.13,-1.71,0.1,1.52,1.06,0,">1 nonsynonymous","F17R N64V",2
"lib2","SARS-CoV-2","CAGAGAGTTGTTGAAA",5,80.04,10.8,-0.04,0.04,2.98,1.04,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","CAGAGATCACTTTTCT",9,209.51,10.56,-0.27,0.04,2.9,1.09,0,">1 nonsynonymous","A33T T148D",2
"lib2","SARS-CoV-2","CAGAGATGTTAAACAG",12,4.12,NA,NA,NA,NA,NA,NA,"stop","N64I T100A N157* S200F",4
"lib2","SARS-CoV-2","CAGAGATGTTTTTCTG",3,52.32,7.59,-3.24,0.15,1.5,1.04,0.01,">1 nonsynonymous","G9V S113D",2
"lib2","SARS-CoV-2","CAGAGCAAAAAAAAGG",3,64.83,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V20L I28K L57M F99T",4
"lib2","SARS-CoV-2","CAGAGCAAGCTATAAT",3,65.83,10.49,-0.34,0.03,2.88,1.11,0,">1 nonsynonymous","C61R Y91L L131I",3
"lib2","SARS-CoV-2","CAGAGCACAAATTGCT",1,6.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","CAGAGCATAAAAGCAT",4,63.68,9.83,-1.01,0.08,2.78,1.04,0,">1 nonsynonymous","C31L K87F N120S",3
"lib2","SARS-CoV-2","CAGAGCATATCCGCTA",14,219.29,10.77,-0.06,0.04,2.91,1.09,0,">1 nonsynonymous","S129T E141S K198T",3
"lib2","SARS-CoV-2","CAGAGCATCATACGCG",9,60.39,10.37,-0.46,0.06,2.84,1.09,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","CAGAGCCATTCAAAAC",3,2.06,NA,NA,NA,NA,NA,NA,"stop","C31T Y39* Y50* G83P I88R",5
"lib2","SARS-CoV-2","CAGAGCCCTAATAATT",1,32.99,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F70A Y123I F134V A145P P169G",5
"lib2","SARS-CoV-2","CAGAGCCCTTAGGAGT",5,84.14,10.72,-0.11,0.05,2.87,1.12,0,">1 nonsynonymous","R136M P197A",2
"lib2","SARS-CoV-2","CAGAGCCTATAGCACG",3,1.13,NA,NA,NA,NA,NA,NA,"stop","C49L T140Q P197*",3
"lib2","SARS-CoV-2","CAGAGCCTTTACTTAA",1,17.59,9.55,-1.29,0.15,1.98,1.09,0.01,">1 nonsynonymous","N4Q S36Q V103A L122R",4
"lib2","SARS-CoV-2","CAGAGCGCACATGCAG",4,12.69,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N1A K56R L60S K94S N130K C158T L183T",7
"lib2","SARS-CoV-2","CAGAGCTAAACGTTCG",2,0.25,NA,NA,NA,NA,NA,NA,"stop","C6N P54F A145C C150G L162* Q176G",6
"lib2","SARS-CoV-2","CAGAGCTACCATTGTT",4,2.77,NA,NA,NA,NA,NA,NA,"stop","N40T L122E K132* P161H",4
"lib2","SARS-CoV-2","CAGAGCTCTTGTCTAG",3,0.15,NA,NA,NA,NA,NA,NA,"stop","S69*",1
"lib2","SARS-CoV-2","CAGAGCTTCAACGAAA",5,24.46,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","C49F N107I P169S",3
"lib2","SARS-CoV-2","CAGAGGAACAAGTTAT",3,71.14,10.05,-0.79,0.08,2.62,1.06,0,">1 nonsynonymous","T3R T46S K56N G152F",4
"lib2","SARS-CoV-2","CAGAGGAATTAACAAC",6,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S A14I V115M S129C",4
"lib2","SARS-CoV-2","CAGAGGACGTATGGAC",4,50.4,10.14,-0.69,0.03,2.97,1,0,">1 nonsynonymous","L38F Q84K F156R",3
"lib2","SARS-CoV-2","CAGAGGAGTAAGAGAA",8,3.75,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","CAGAGGATCTACCTCC",15,182.76,9.07,-1.76,0.17,1.65,1.13,0.01,">1 nonsynonymous","W106G Y175F",2
"lib2","SARS-CoV-2","CAGAGGATGGCATATA",8,57.85,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","Y50N E141R S184C",3
"lib2","SARS-CoV-2","CAGAGGCACCCTAACT",3,32.63,9.84,-0.99,0.09,1.95,1,0,">1 nonsynonymous","T85A D98V Y123L",3
"lib2","SARS-CoV-2","CAGAGGCTGCGAACTG",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A A18R A42M P82E G86V Y121N F167K",7
"lib2","SARS-CoV-2","CAGAGGGAAAAAAATA",9,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55E N107I N118M",3
"lib2","SARS-CoV-2","CAGAGGGAGCTAGAAA",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M Y143S",2
"lib2","SARS-CoV-2","CAGAGGGTAAAATCGT",23,278.69,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","W23G T55S Y93E",3
"lib2","SARS-CoV-2","CAGAGGTCATATTTAA",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R T85A N118M K128M P197A",5
"lib2","SARS-CoV-2","CAGAGGTCTGACCACT",2,30.81,6.08,-4.75,0.48,3,1.25,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","CAGAGGTGCCCGGCTA",3,22.71,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N40M C49G N107I R124M",4
"lib2","SARS-CoV-2","CAGAGTAAAGCCCAAA",9,151.76,9.76,-1.08,0.07,2.48,1.02,0,">1 nonsynonymous","D59R N107A N130L",3
"lib2","SARS-CoV-2","CAGAGTACATAGAGTG",12,0.71,NA,NA,NA,NA,NA,NA,"stop","Q84K W106* F134S",3
"lib2","SARS-CoV-2","CAGAGTACTAAATGTA",5,16.77,10.8,-0.03,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGAGTACTAGCGTAC",17,338.82,10.79,-0.04,0.04,2.93,1.08,0,"1 nonsynonymous","T140M",1
"lib2","SARS-CoV-2","CAGAGTACTCAATGAC",7,3.88,NA,NA,NA,NA,NA,NA,"stop","Y39V G51S Q84* S108* K199T",5
"lib2","SARS-CoV-2","CAGAGTAGCCAATATT",2,78.66,8.67,-2.16,0.1,2.76,1.04,0,">1 nonsynonymous","Y143L G174E S184A",3
"lib2","SARS-CoV-2","CAGAGTATAGAGCACT",2,18.26,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y21R V52H V77R T85G",4
"lib2","SARS-CoV-2","CAGAGTATAGGTATAC",1,7.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2E D34P L95T Y121L",4
"lib2","SARS-CoV-2","CAGAGTATCAGTAATT",5,99.78,10.35,-0.48,0.04,2.96,1.05,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","CAGAGTATGTCCTCTC",18,263.05,10.56,-0.28,0.03,2.94,1.04,0,">1 nonsynonymous","P7M Q163H",2
"lib2","SARS-CoV-2","CAGAGTCAAACGACTA",3,49.91,10.7,-0.14,0.04,2.95,1.08,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","CAGAGTCATCTTTACA",5,95.03,7.77,-3.06,0.2,1.5,1.11,0.01,">1 nonsynonymous","P7D Y119R L162K",3
"lib2","SARS-CoV-2","CAGAGTCCACGAAACA",1,35.8,7.67,-3.17,0.15,1.59,1.04,0.01,">1 nonsynonymous","R136Y F156V Q176M",3
"lib2","SARS-CoV-2","CAGAGTCCCAACCCTA",2,33.56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V115I Y143D Q176S",3
"lib2","SARS-CoV-2","CAGAGTCTTATAGTAC",2,12.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53R P96I F160V",3
"lib2","SARS-CoV-2","CAGAGTGAAACATAAT",1,43.38,7.89,-2.94,0.14,1.82,1.05,0.01,">1 nonsynonymous","L122T T148V N157V",3
"lib2","SARS-CoV-2","CAGAGTGAGCAATTCG",6,1.93,NA,NA,NA,NA,NA,NA,"stop","E10* S36M K56T",3
"lib2","SARS-CoV-2","CAGAGTGCCCGGTCAA",7,13.03,8.52,-2.32,0.21,1.5,1.06,0.03,">1 nonsynonymous","T100I E135T F185S T201C",4
"lib2","SARS-CoV-2","CAGAGTGGACTCGGTG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F12S A22S P177M S184A H189*",5
"lib2","SARS-CoV-2","CAGAGTTAAATTATGT",18,166.74,8.27,-2.56,0.13,1.5,1.14,0.01,">1 nonsynonymous","S41R G86H",2
"lib2","SARS-CoV-2","CAGAGTTACGTAAATC",8,162.77,10.8,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","S43A",1
"lib2","SARS-CoV-2","CAGAGTTCCATCCGAA",1,24.27,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","S19Y G101C",2
"lib2","SARS-CoV-2","CAGAGTTCCCAGGGTA",17,212.18,10.87,0.03,0.05,2.87,1.14,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","CAGATAAAAGATTAGA",4,1.08,NA,NA,NA,NA,NA,NA,"stop","T3N E135*",2
"lib2","SARS-CoV-2","CAGATAAAAGCATGGA",2,8.35,10.16,-0.68,0.11,2.82,1,0,">1 nonsynonymous","R78V Q84N I142M",3
"lib2","SARS-CoV-2","CAGATAAAAGCCAATC",9,139.02,9.37,-1.47,0.06,1.76,1.1,0,">1 nonsynonymous","V37S P82R",2
"lib2","SARS-CoV-2","CAGATAAAAGTGATTT",3,25.57,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F44S L95D G146C",3
"lib2","SARS-CoV-2","CAGATAAACTTGCTTA",5,11.07,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A33S A42S F70Y N157T",4
"lib2","SARS-CoV-2","CAGATAAAGACGCACA",1,5.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L60P F99S",2
"lib2","SARS-CoV-2","CAGATAAATGAAAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C158P T201*",2
"lib2","SARS-CoV-2","CAGATAACCAACCATC",4,50.14,10.65,-0.19,0.07,2.9,1.08,0,">1 nonsynonymous","F134N N151G",2
"lib2","SARS-CoV-2","CAGATAACCGGGATAC",3,40.87,9.81,-1.02,0.06,2.23,1.03,0,">1 nonsynonymous","A18E C31S Q84E",3
"lib2","SARS-CoV-2","CAGATAACGTATTGAT",13,154.49,8.44,-2.39,0.08,1.5,1.07,0,">1 nonsynonymous","K56P D97T Y143L",3
"lib2","SARS-CoV-2","CAGATAAGAAAACGCT",11,125.3,10.84,0.01,0.05,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATAAGAAAGTTGA",2,71.66,8.18,-2.65,0.1,2.34,1.05,0,">1 nonsynonymous","S113L K128E E154V",3
"lib2","SARS-CoV-2","CAGATAAGAAATCCAA",4,78,10.44,-0.39,0.06,2.93,1.08,0,">1 nonsynonymous","K114D S147V",2
"lib2","SARS-CoV-2","CAGATAAGAAATGTGA",8,22.26,6,-4.84,2,3,1.25,0.01,"1 nonsynonymous","G101I",1
"lib2","SARS-CoV-2","CAGATAAGACAATATA",4,50.42,7.39,-3.45,0.35,1.5,1.17,0.04,">1 nonsynonymous","K48C G86S L188Q",3
"lib2","SARS-CoV-2","CAGATAAGGGCATAAC",4,74,6.76,-4.07,0.21,1.52,1.1,0.01,">1 nonsynonymous","Q84K C150S",2
"lib2","SARS-CoV-2","CAGATAAGTCCGTAAG",5,79.91,9.31,-1.52,0.07,1.96,1.09,0,">1 nonsynonymous","A33E G152V",2
"lib2","SARS-CoV-2","CAGATAATCATATTGC",4,47.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y35G I88S D97E",3
"lib2","SARS-CoV-2","CAGATACAATAGAAAT",3,30.09,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F12S F47L P96H V115R Y159P G174E",6
"lib2","SARS-CoV-2","CAGATACAATGGCTCA",13,183.91,6,-4.84,0.41,1.5,1.13,0,">1 nonsynonymous","C31L T55Y Y119L P169V",4
"lib2","SARS-CoV-2","CAGATACAGTACATCT",11,0.29,NA,NA,NA,NA,NA,NA,"stop","G9D S41I T55* Y121Q E154W",5
"lib2","SARS-CoV-2","CAGATACATACCCGGC",5,34.81,9.78,-1.05,0.21,2.29,1.04,0.03,">1 nonsynonymous","N13S A33D K199S",3
"lib2","SARS-CoV-2","CAGATACATGACGGAA",2,111.17,9.69,-1.15,0.04,2,1.05,0,">1 nonsynonymous","S36C D98V N110T S147T",4
"lib2","SARS-CoV-2","CAGATACCAGCAACAC",6,41.81,6.98,-3.86,0.43,1.5,1.12,0.07,">1 nonsynonymous","F17S G51Q G155M",3
"lib2","SARS-CoV-2","CAGATACGAGGAACGG",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61E N109S I138H K198L",4
"lib2","SARS-CoV-2","CAGATACGTAATCCCT",6,43.59,6,-4.84,0.99,1.5,1.18,0.01,">1 nonsynonymous","K94V Y165H",2
"lib2","SARS-CoV-2","CAGATAGAGCTACGGC",1,5.38,9.36,-1.47,0.38,1.53,1.02,0.02,"1 nonsynonymous","L95F",1
"lib2","SARS-CoV-2","CAGATAGCAATCGCCA",2,81.53,10.87,0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATAGTCAAAAGTC",9,20.1,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G9V V103G",2
"lib2","SARS-CoV-2","CAGATAGTCATCGCCG",3,34.87,10.68,-0.16,0.05,2.89,1.01,0,">1 nonsynonymous","T3E S41C K128R",3
"lib2","SARS-CoV-2","CAGATATAAAAATAAA",4,102.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F47C A105S E141V F160L P177Y",5
"lib2","SARS-CoV-2","CAGATATCCCAAATGA",2,9.74,10.84,0,0.07,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATATCCCATTACA",5,44.3,10.95,0.12,0.05,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGATATCGATAGTAC",8,114.21,7.03,-3.81,0.27,1.5,1.08,0.02,">1 nonsynonymous","S69L E135L",2
"lib2","SARS-CoV-2","CAGATATCTCAAAAAT",2,11.37,7.15,-3.69,0.41,1.5,1.19,0.05,">1 nonsynonymous","I2T F17L T63S Y91L K114D S129F",6
"lib2","SARS-CoV-2","CAGATATGAACTAGGA",5,16.91,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","F44R L57V T63V S108A I142S",5
"lib2","SARS-CoV-2","CAGATATGGGGCCCTT",15,120.14,6,-4.84,2,1.5,1.21,0,">1 nonsynonymous","C31M C49N D59W",3
"lib2","SARS-CoV-2","CAGATATGTCCAGATC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","T3Q G9N V20L R27* V37S D68V Y123T",7
"lib2","SARS-CoV-2","CAGATATTAAACACTT",3,59.43,8.44,-2.4,0.11,2.01,1.11,0,">1 nonsynonymous","T15N A22W V37F T63G Q176H P197L",6
"lib2","SARS-CoV-2","CAGATATTCCTTGATG",1,3.59,NA,NA,NA,NA,NA,NA,"stop","T15S V77M F99N T140H Q163*",5
"lib2","SARS-CoV-2","CAGATATTTCGACCAT",5,29.87,10.74,-0.1,0.05,2.87,1,0,">1 nonsynonymous","G9P D98R N171Y",3
"lib2","SARS-CoV-2","CAGATCAAACATGCTT",14,143.22,8.24,-2.59,0.11,1.88,1.08,0,">1 nonsynonymous","K87A W106C G155S",3
"lib2","SARS-CoV-2","CAGATCAAAGACCCCC",9,199.97,9.76,-1.08,0.06,2.46,1.02,0,">1 nonsynonymous","C6S L57F N64V",3
"lib2","SARS-CoV-2","CAGATCAACAGCCCCG",2,17.59,9.81,-1.02,0.35,1.8,1.07,0.04,">1 nonsynonymous","C49G V52A K132T Y178F S184D",5
"lib2","SARS-CoV-2","CAGATCACTAATATAT",1,55.45,6,-4.84,2,3,1.06,0,">1 nonsynonymous","R25A Y159S K199G",3
"lib2","SARS-CoV-2","CAGATCAGAAATTTTG",13,81.86,10.67,-0.16,0.05,3,1,0,">1 nonsynonymous","V37S C61S E141M",3
"lib2","SARS-CoV-2","CAGATCAGGCAGAGAT",1,20.23,6.04,-4.79,1.38,1.5,1.13,0.04,">1 nonsynonymous","N4V K48V T55F F62R N92K",5
"lib2","SARS-CoV-2","CAGATCAGGCCCGCGT",7,157.06,10.39,-0.45,0.02,2.95,1.04,0,"1 nonsynonymous","I28C",1
"lib2","SARS-CoV-2","CAGATCAGTTACTATA",3,20.11,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","N13S V32L T55W T85E Y165C T201H",6
"lib2","SARS-CoV-2","CAGATCCACCAGATAG",4,47.95,10.74,-0.09,0.07,2.86,1.1,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","CAGATCCAGCAGCCGC",1,53.06,10.06,-0.78,0.05,2.9,1,0,">1 nonsynonymous","F44M K56S P169S",3
"lib2","SARS-CoV-2","CAGATCCATTCTTGAC",3,238.1,10.88,0.04,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATCCCATCATATA",13,231.16,10.86,0.03,0.04,2.91,1.08,0,"1 nonsynonymous","N110R",1
"lib2","SARS-CoV-2","CAGATCCCCCCTCTTA",2,43.74,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","R27V F44Q C49I F70T F156R F167Y",6
"lib2","SARS-CoV-2","CAGATCCTGTCACGGC",16,3.46,NA,NA,NA,NA,NA,NA,"stop","T55* A81G E135S Y159A",4
"lib2","SARS-CoV-2","CAGATCGAACTCCGCA",2,33.5,8.69,-2.15,0.28,1.78,1.06,0.03,">1 nonsynonymous","Q168A Y175D",2
"lib2","SARS-CoV-2","CAGATCGACAAGAATG",1,6.25,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib2","SARS-CoV-2","CAGATCGACCCTAAAT",2,12.68,10.16,-0.67,0.14,2.72,1.04,0.01,">1 nonsynonymous","G9S A14R N110P",3
"lib2","SARS-CoV-2","CAGATCGCCCCTATAC",2,12.11,8.23,-2.61,0.2,2.63,1.02,0.02,">1 nonsynonymous","F126N S139G P149N F156L",4
"lib2","SARS-CoV-2","CAGATCGCTATCAGTG",8,136.79,8.54,-2.3,0.07,1.59,1.09,0,">1 nonsynonymous","K87N P133L",2
"lib2","SARS-CoV-2","CAGATCTAAATACAGC",10,137.21,9.78,-1.05,0.08,2.26,1.04,0,">1 nonsynonymous","Q84V R136S N151E",3
"lib2","SARS-CoV-2","CAGATCTAAGACCACC",2,7.12,NA,NA,NA,NA,NA,NA,"stop","C31* G86K K114F",3
"lib2","SARS-CoV-2","CAGATCTCCTTCTGTG",2,23.9,8.16,-2.68,0.22,2.82,1.05,0.02,">1 nonsynonymous","F44L Y91W K114V F156V",4
"lib2","SARS-CoV-2","CAGATCTGCTTTGAAA",13,2.05,NA,NA,NA,NA,NA,NA,"stop","K132F L187*",2
"lib2","SARS-CoV-2","CAGATGAAACTGTGTG",1,17.31,10.7,-0.13,0.08,3,1.03,0,"1 nonsynonymous","E10S",1
"lib2","SARS-CoV-2","CAGATGAACCGCAATT",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D D98T A105I N120I R136T T170Y",6
"lib2","SARS-CoV-2","CAGATGACCAAAACAG",8,162.04,10.49,-0.35,0.05,2.87,1.05,0,">1 nonsynonymous","S29Y K56V Q163H",3
"lib2","SARS-CoV-2","CAGATGACTATTATAA",5,80.26,10,-0.83,0.03,2.99,1.02,0,">1 nonsynonymous","N130F F156S",2
"lib2","SARS-CoV-2","CAGATGACTCTACCTT",7,243.13,10.06,-0.77,0.04,2.85,1.09,0,">1 nonsynonymous","D59A G174F",2
"lib2","SARS-CoV-2","CAGATGAGTATATTCC",2,8.82,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","Q79E N107Y K128F",3
"lib2","SARS-CoV-2","CAGATGATAAACCCAC",7,94.16,10.82,-0.02,0.04,2.99,1.03,0,"1 nonsynonymous","G83Y",1
"lib2","SARS-CoV-2","CAGATGATGCAACATC",6,44.99,9.21,-1.62,0.27,1.5,1.11,0.04,">1 nonsynonymous","C6H S45L D98A",3
"lib2","SARS-CoV-2","CAGATGCAACCATACA",2,1.67,NA,NA,NA,NA,NA,NA,"stop","Y35N Q84* P96W N120S",4
"lib2","SARS-CoV-2","CAGATGCCGTTTCCGA",1,37.61,10.67,-0.17,0.05,2.97,1,0,">1 nonsynonymous","A42S G152S",2
"lib2","SARS-CoV-2","CAGATGCTGGAATGGA",6,115.74,10.15,-0.69,0.07,2.32,1,0,">1 nonsynonymous","Y91R K128P",2
"lib2","SARS-CoV-2","CAGATGGAACCACTTG",2,7.72,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","L95W G117S I142A T201L",4
"lib2","SARS-CoV-2","CAGATGGCACTTAACT",9,68.32,9.76,-1.08,0.28,1.5,1.04,0.04,">1 nonsynonymous","N92T W106P D112F",3
"lib2","SARS-CoV-2","CAGATGGGTCACATGT",4,187.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7H Y35E R73L V77L G155Q G166C",6
"lib2","SARS-CoV-2","CAGATGGTTAAGAGTT",8,42.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F167V G174W",2
"lib2","SARS-CoV-2","CAGATGTAAATATTAA",1,10.88,10.03,-0.81,0.1,2.77,1.02,0,">1 nonsynonymous","Q84M A89H N130T",3
"lib2","SARS-CoV-2","CAGATGTCCAGTGCCT",5,0,NA,NA,NA,NA,NA,NA,"stop","S69P S129*",2
"lib2","SARS-CoV-2","CAGATGTGACTATAAA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","N13L K56* E135H",3
"lib2","SARS-CoV-2","CAGATGTGCGTGACGC",3,31.66,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Q79H L122M F167I",3
"lib2","SARS-CoV-2","CAGATGTTTATCCTCC",1,51.11,9.09,-1.74,0.08,2.71,1.09,0,">1 nonsynonymous","A33L N118I K199S",3
"lib2","SARS-CoV-2","CAGATTACAGCTATAA",7,101.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N64F Y93S L131T S139I",4
"lib2","SARS-CoV-2","CAGATTACTAGAATAT",1,0.53,NA,NA,NA,NA,NA,NA,"stop","P82Q I88G G116E K199*",4
"lib2","SARS-CoV-2","CAGATTAGTTGCATTG",18,105.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D68N E76G",2
"lib2","SARS-CoV-2","CAGATTATCCACAAAG",3,19.64,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D34L T55A Y91L N107A R124G",5
"lib2","SARS-CoV-2","CAGATTATCTTACAAC",8,154.13,8.14,-2.7,0.1,1.66,1.07,0,">1 nonsynonymous","G9L I28F G83S S113M T193I T201A",6
"lib2","SARS-CoV-2","CAGATTATGCTTTACT",4,91.58,8.46,-2.38,0.1,2.78,1.03,0,">1 nonsynonymous","N118L F156S",2
"lib2","SARS-CoV-2","CAGATTCAAGAATTTA",3,26.25,10.15,-0.69,0.13,2.03,1.02,0.01,">1 nonsynonymous","T15L S19T Y35E N120D R127S E141F K198H",7
"lib2","SARS-CoV-2","CAGATTCACAGAACAT",5,0.07,NA,NA,NA,NA,NA,NA,"stop","S41P S45L C61K Y91S A105R E154K S184*",7
"lib2","SARS-CoV-2","CAGATTCATAGATCCG",19,352.5,10.81,-0.03,0.04,2.92,1.08,0,">1 nonsynonymous","T3R S200F",2
"lib2","SARS-CoV-2","CAGATTCGATACCTGT",8,0.49,NA,NA,NA,NA,NA,NA,"stop","I28L G51A D98* W106F P161L",5
"lib2","SARS-CoV-2","CAGATTGAAGTCATCT",15,173.19,9.87,-0.97,0.05,2.07,1.05,0,">1 nonsynonymous","V20C L60N",2
"lib2","SARS-CoV-2","CAGATTGAATAAAGTA",2,54.21,7.29,-3.54,0.2,2.24,1.16,0.01,">1 nonsynonymous","C150L C158L",2
"lib2","SARS-CoV-2","CAGATTGAGGTATCAT",1,38.87,9.96,-0.87,0.06,2.29,1.07,0,">1 nonsynonymous","C6D D98P K199D",3
"lib2","SARS-CoV-2","CAGATTGATTCAGGCA",1,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L G83S",2
"lib2","SARS-CoV-2","CAGATTGCTTCGATAG",2,39.2,10.8,-0.04,0.08,2.95,1.06,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","CAGATTGCTTGAATAA",4,52.28,10.87,0.03,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATTGTAAATGTGC",5,74.03,8.38,-2.46,0.14,2.88,1.09,0.01,">1 nonsynonymous","N110T F126T T140F E154P A192T",5
"lib2","SARS-CoV-2","CAGATTTAAAGAACAT",6,96.76,10.84,0.01,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGATTTAATGCGTAC",6,157.31,9.76,-1.07,0.04,2.84,1.02,0,">1 nonsynonymous","Y165M H189T",2
"lib2","SARS-CoV-2","CAGATTTATTTAATCT",9,249.18,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37N G86L L95V V115L P177A",5
"lib2","SARS-CoV-2","CAGATTTCTTTGTCAT",9,2.94,NA,NA,NA,NA,NA,NA,"stop","W106* K114S G146L",3
"lib2","SARS-CoV-2","CAGATTTGAAGTTAGA",2,44.59,10.44,-0.39,0.08,2.83,1.12,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","CAGATTTTACAACCAG",8,58.29,6.31,-4.53,0.71,1.5,1.27,0.03,">1 nonsynonymous","L5Q V37P D90L K94F G152Y",5
"lib2","SARS-CoV-2","CAGATTTTAGCGGCTA",11,157.37,7.35,-3.48,0.15,1.95,1.17,0.01,">1 nonsynonymous","R27L C158Q",2
"lib2","SARS-CoV-2","CAGATTTTGCACGACT",2,69.06,8.41,-2.42,0.11,2.5,1.12,0,">1 nonsynonymous","Y50F L125K G152Q",3
"lib2","SARS-CoV-2","CAGCAAAAACTGGAAT",7,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87E F99L S184P",3
"lib2","SARS-CoV-2","CAGCAAAAAGTGTAGC",1,42.63,10.68,-0.15,0.04,2.99,1.02,0,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","CAGCAAACAATTACAC",4,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58M D90L E135C",3
"lib2","SARS-CoV-2","CAGCAAACAGTGCACA",3,18.89,8.72,-2.12,0.2,1.5,1.13,0.02,">1 nonsynonymous","D59A Q84L D98I",3
"lib2","SARS-CoV-2","CAGCAAACGCATATGA",7,120.78,10.19,-0.65,0.05,2.77,1.06,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CAGCAAACGCTGATCG",5,0.45,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","CAGCAAACTTAGAAAA",11,102.47,6.32,-4.52,0.59,1.5,1.2,0.02,">1 nonsynonymous","A18S S36C K56W N151I",4
"lib2","SARS-CoV-2","CAGCAAACTTAGAGTC",3,37.76,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","N4C T46N G166K Q176R",4
"lib2","SARS-CoV-2","CAGCAAAGCTCTCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","D98* V182S",2
"lib2","SARS-CoV-2","CAGCAAAGGCAAGGGG",5,53.34,6,-4.84,0.65,3,1.18,0.01,">1 nonsynonymous","S19L G152P F156A H189P",4
"lib2","SARS-CoV-2","CAGCAAATAAGGTGAT",10,116.3,10.77,-0.07,0.04,2.94,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGCAAATAATAAGAC",1,18.82,10.62,-0.22,0.09,2.78,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCAAATATAAGGTG",4,46.27,9.61,-1.23,0.1,1.84,1.11,0,">1 nonsynonymous","S43V Y50N S129T",3
"lib2","SARS-CoV-2","CAGCAAATATGAAGGC",1,12.53,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","D59H A81D I88K",3
"lib2","SARS-CoV-2","CAGCAAATCACCAGGA",6,88.02,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5T Y121S P177R",3
"lib2","SARS-CoV-2","CAGCAAATGATAATGT",8,3.29,NA,NA,NA,NA,NA,NA,"stop","C102S K132* G155C",3
"lib2","SARS-CoV-2","CAGCAAATTACGAGAT",2,11.99,7.58,-3.25,0.21,1.5,1,0.02,">1 nonsynonymous","K87H R127V",2
"lib2","SARS-CoV-2","CAGCAACAAAATCGAC",1,20.22,8.76,-2.08,0.11,2.37,1,0.01,">1 nonsynonymous","A89S Y119F Q163W Y178W P197K",5
"lib2","SARS-CoV-2","CAGCAACAAATCCATA",6,2.11,NA,NA,NA,NA,NA,NA,"stop","W23A K114* V180M",3
"lib2","SARS-CoV-2","CAGCAACAACTGCCCA",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102T G146L",2
"lib2","SARS-CoV-2","CAGCAACAGGCACAAA",8,225.73,10.79,-0.04,0.05,2.89,1.11,0,">1 nonsynonymous","T55H D90L P197K",3
"lib2","SARS-CoV-2","CAGCAACATGGAATTA",2,29.12,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9R Y35R Y121I Y159L",4
"lib2","SARS-CoV-2","CAGCAACGACAAGTTT",10,129.8,10.77,-0.06,0.05,2.89,1.1,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","CAGCAACGTTTAAATA",6,16.49,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C49M G83A",2
"lib2","SARS-CoV-2","CAGCAACTTTGGGAAA",8,183.41,10.84,0,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCAAGAAGATGTTG",2,18.27,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","V37Y C61L D68L A81T K128D D137K",6
"lib2","SARS-CoV-2","CAGCAAGAATGCACAT",10,6.27,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13L A33R F47R Q84R V103S",5
"lib2","SARS-CoV-2","CAGCAAGAGCACGACA",4,54.28,9.24,-1.6,0.05,2.99,1.04,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","CAGCAAGCACGATACA",1,12.4,10.73,-0.11,0.07,2.99,1.04,0,">1 nonsynonymous","F8L N64A",2
"lib2","SARS-CoV-2","CAGCAAGCAGTTAAAC",4,88.07,10.78,-0.06,0.03,3,1.01,0,"1 nonsynonymous","K128M",1
"lib2","SARS-CoV-2","CAGCAAGCTAAGTGGG",19,330.35,9.35,-1.49,0.04,2.75,1.08,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","CAGCAAGGACCAAACG",4,1.46,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","CAGCAAGGATTGAGAT",5,62.16,9.87,-0.97,0.1,2.35,1.02,0,"1 nonsynonymous","K26G",1
"lib2","SARS-CoV-2","CAGCAATAAATTCACA",2,27.81,10.22,-0.61,0.05,2.92,1.04,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","CAGCAATCACAAACAA",1,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152S P161F",2
"lib2","SARS-CoV-2","CAGCAATCCCTCGTCT",7,64.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N30I Y50F L95M W106E V173Y",5
"lib2","SARS-CoV-2","CAGCAATCTAGAATAA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29Q V37Q F44V D90M Y121L P161R",6
"lib2","SARS-CoV-2","CAGCAATGTTCTGAAT",2,1.11,NA,NA,NA,NA,NA,NA,"stop","Y35* C49L R127M",3
"lib2","SARS-CoV-2","CAGCAATTCCGTAGAA",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L C49Y T170K A190V T201P",5
"lib2","SARS-CoV-2","CAGCACAAAGTATCTA",14,371.09,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C6N A18G Y35S N58L W106N A145T",6
"lib2","SARS-CoV-2","CAGCACAACCTGCACG",9,175.97,10.85,0.02,0.05,2.98,1.05,0,"1 nonsynonymous","D97H",1
"lib2","SARS-CoV-2","CAGCACACAATGTTGA",1,13.39,10.8,-0.04,0.08,3,1.04,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","CAGCACATATAGTCAA",3,22.99,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E10F V37Y T63Y F70I I142D",5
"lib2","SARS-CoV-2","CAGCACCAAAAAAATT",3,39.33,10.43,-0.4,0.11,2.71,1.09,0,"1 nonsynonymous","D59I",1
"lib2","SARS-CoV-2","CAGCACCACACCCGTA",3,1.09,NA,NA,NA,NA,NA,NA,"stop","N64D V103* Y119F",3
"lib2","SARS-CoV-2","CAGCACCCAGATAATT",7,106.09,10.91,0.07,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGCACCGACGAATCG",3,14.22,6.17,-4.66,1.06,1.5,1.2,0.02,">1 nonsynonymous","G9W E76P C150G F167E N171H L183V",6
"lib2","SARS-CoV-2","CAGCACCGGAGATAAG",9,45.05,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","P96W C150G P161N",3
"lib2","SARS-CoV-2","CAGCACCGGATAAACA",2,10.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P96L T140H L162K",3
"lib2","SARS-CoV-2","CAGCACCGTTTTTAAC",5,20.38,10.71,-0.12,0.04,2.89,1.08,0,">1 nonsynonymous","K56F Y91F",2
"lib2","SARS-CoV-2","CAGCACCTACGACTAT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Q D90T G116E Y165R L183D",5
"lib2","SARS-CoV-2","CAGCACCTGAGAGTCA",11,172.08,10.23,-0.61,0.03,2.81,1.04,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CAGCACGAGTGTGGAT",4,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30V G86R D137T G146N S200F",5
"lib2","SARS-CoV-2","CAGCACGCATACTTCC",4,72.04,10.12,-0.72,0.06,2.61,1,0,">1 nonsynonymous","S43V A67Y",2
"lib2","SARS-CoV-2","CAGCACGCTTTGCCCC",14,0.53,NA,NA,NA,NA,NA,NA,"stop","L5* W23K T140G",3
"lib2","SARS-CoV-2","CAGCACGGACGCGGAG",1,19.34,8.94,-1.9,0.09,2.93,1.09,0,">1 nonsynonymous","Q84M G146K",2
"lib2","SARS-CoV-2","CAGCACTATGTCGAAT",1,11.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43D V77P F99L P133S E141Q",5
"lib2","SARS-CoV-2","CAGCACTCAACTTTAG",5,115.58,9.92,-0.92,0.05,2.75,1.03,0,">1 nonsynonymous","F12M G116V",2
"lib2","SARS-CoV-2","CAGCACTCACTAGTAA",4,26.11,9.33,-1.51,0.21,1.8,1.1,0.03,">1 nonsynonymous","S41I G86S",2
"lib2","SARS-CoV-2","CAGCACTCGTTTGAAC",5,181.72,10.9,0.07,0.06,2.93,1.05,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","CAGCACTTATTCAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11H F134L G166T",3
"lib2","SARS-CoV-2","CAGCACTTCTAGGGTC",7,2.02,NA,NA,NA,NA,NA,NA,"stop","S53Y K87* R124A",3
"lib2","SARS-CoV-2","CAGCAGAAAGTAGTAT",4,1.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23T",1
"lib2","SARS-CoV-2","CAGCAGAAATCAATCA",2,24.53,9.03,-1.81,0.17,1.9,1.12,0.01,">1 nonsynonymous","K48N K94C F134L",3
"lib2","SARS-CoV-2","CAGCAGAAGGTAATGT",1,21.17,9.6,-1.24,0.18,2.25,1.08,0.02,">1 nonsynonymous","N13Y G83V G155K",3
"lib2","SARS-CoV-2","CAGCAGAATCAAACGA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","Y39L S45A G196*",3
"lib2","SARS-CoV-2","CAGCAGACAGACGAAG",3,1.37,NA,NA,NA,NA,NA,NA,"stop","N92G E154*",2
"lib2","SARS-CoV-2","CAGCAGACGGCTACCT",1,11,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N40F N107T G117C",3
"lib2","SARS-CoV-2","CAGCAGAGATAGTGCT",3,71,8.23,-2.61,0.28,1.5,1,0.03,"1 nonsynonymous","P82E",1
"lib2","SARS-CoV-2","CAGCAGATATTATCGA",14,103.26,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","CAGCAGATCTCATACG",10,9.2,6.7,-4.13,0.69,1.82,1.31,0.06,">1 nonsynonymous","C61T R73Y K94C W106R G146K T201N",6
"lib2","SARS-CoV-2","CAGCAGCAGAATCCCA",7,79.27,6.02,-4.82,0.99,1.5,1.18,0.02,">1 nonsynonymous","G116S G172D",2
"lib2","SARS-CoV-2","CAGCAGGGCTTGAACG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","CAGCAGTACCACTAGA",3,8.47,9.36,-1.48,0.19,1.99,1.03,0.02,">1 nonsynonymous","W106L P149L",2
"lib2","SARS-CoV-2","CAGCAGTTATGAAGCC",4,219.28,10.38,-0.46,0.03,2.91,1.06,0,">1 nonsynonymous","N24G N58M",2
"lib2","SARS-CoV-2","CAGCATAATATAATTC",13,57.25,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I28W F44P V65W S139F P149G S184N",6
"lib2","SARS-CoV-2","CAGCATAATCCTCACT",4,98.82,10.59,-0.25,0.06,2.85,1.04,0,"1 nonsynonymous","I104T",1
"lib2","SARS-CoV-2","CAGCATACCTATAATG",11,174.8,10.88,0.04,0.05,2.85,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATACTAAGACCC",9,249.37,10.75,-0.09,0.04,2.92,1.09,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CAGCATACTCTATGAT",4,44.06,10.81,-0.03,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATACTGCAATAT",4,20.63,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A81G L131W",2
"lib2","SARS-CoV-2","CAGCATAGAGGGATTA",9,110.37,6,-4.84,0.98,2.25,1.16,0,">1 nonsynonymous","R27M V37D D90I G117S",4
"lib2","SARS-CoV-2","CAGCATAGCACTCAAG",8,176.75,10.81,-0.03,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATATAGTTCAAA",8,57.42,8.14,-2.7,0.28,1.5,1.06,0.04,">1 nonsynonymous","I72R Q168A K198R",3
"lib2","SARS-CoV-2","CAGCATCAGCCGCGAG",9,56.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G A81M",2
"lib2","SARS-CoV-2","CAGCATCCACGGTGAC",6,187.13,8.64,-2.2,0.05,2.94,1.02,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","CAGCATCCCCCCGTCT",1,27.64,10.28,-0.56,0.13,2.68,1.06,0.01,">1 nonsynonymous","L5K N24K D97I A105Y",4
"lib2","SARS-CoV-2","CAGCATCCTGCAGCCC",2,13.65,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","I2L F44G Y50N G146W",4
"lib2","SARS-CoV-2","CAGCATCTCTTCCATG",1,36.8,10.04,-0.8,0.13,2.6,1.08,0.01,">1 nonsynonymous","S29L G83L",2
"lib2","SARS-CoV-2","CAGCATGAATTAGTAC",2,8.26,10.83,0,0.09,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATGAGCAAGAAA",6,84.15,10.51,-0.33,0.05,2.85,1.08,0,">1 nonsynonymous","D98L A190S",2
"lib2","SARS-CoV-2","CAGCATGATCCGAAAC",4,110.39,10.9,0.06,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATGTTATATACG",10,108.91,6,-4.84,1.44,1.5,1.17,0,">1 nonsynonymous","S19M Y35S F47L Y93S A105C",5
"lib2","SARS-CoV-2","CAGCATTAAGACCAAT",4,226.93,10.85,0.01,0.04,2.92,1.07,0,">1 nonsynonymous","I2H S129T",2
"lib2","SARS-CoV-2","CAGCATTATACTGATG",3,87.74,10.85,0.02,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCATTCAACGCCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33T A42M D98* S147F",4
"lib2","SARS-CoV-2","CAGCATTGCGCGGGAT",2,86.71,10.67,-0.17,0.04,2.91,1.05,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","CAGCATTTAACAACAC",2,7.86,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","Q84N F99T",2
"lib2","SARS-CoV-2","CAGCCAAGAATCGAAC",5,0.66,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib2","SARS-CoV-2","CAGCCAATAAGCGACA",2,81.64,10.34,-0.5,0.05,2.84,1.08,0,">1 nonsynonymous","A33S P54L A89S",3
"lib2","SARS-CoV-2","CAGCCAATAATACACC",3,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L T15H A18E G86N S108K P169H V173C",7
"lib2","SARS-CoV-2","CAGCCACGATAACCCC",2,55.03,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y21Q A33P G86T",3
"lib2","SARS-CoV-2","CAGCCACTTAGGCCTC",3,34.2,9.51,-1.33,0.1,2.04,1.08,0,">1 nonsynonymous","P7T I28K V115N",3
"lib2","SARS-CoV-2","CAGCCAGACATTAACG",7,80.56,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I28K D90S G101L R127M",4
"lib2","SARS-CoV-2","CAGCCAGGGCGTAACT",7,124.03,10.81,-0.02,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCCAGGTATGTCAA",10,53.23,9.46,-1.38,0.18,2.1,1.09,0.01,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","CAGCCAGTAAAGACCA",11,93.01,6.51,-4.33,0.48,1.5,1.19,0.02,">1 nonsynonymous","S36H N107P N118K S139R",4
"lib2","SARS-CoV-2","CAGCCAGTCAACTGGA",6,68.73,6,-4.84,2,1.5,1.4,0.03,">1 nonsynonymous","D90R F99N N157D",3
"lib2","SARS-CoV-2","CAGCCAGTTAAATAGA",8,67.1,10.85,0.01,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCCATAAATCCAAG",6,0.97,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib2","SARS-CoV-2","CAGCCCAAGAGTATAC",3,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L Y93P L131I Q144D Q176T",5
"lib2","SARS-CoV-2","CAGCCCAGAATAATTA",3,41.88,10.72,-0.12,0.06,2.96,1.07,0,">1 nonsynonymous","F8L T15S",2
"lib2","SARS-CoV-2","CAGCCCAGTTTGCTAA",2,18.35,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N58P K94Q N109F E141T",4
"lib2","SARS-CoV-2","CAGCCCATAAAGTGCG",3,21.73,6.22,-4.62,0.93,1.5,1.17,0.03,">1 nonsynonymous","V32A F62K N92R D97K",4
"lib2","SARS-CoV-2","CAGCCCATAAATTTTG",4,53.38,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5M Y39P W106K Y121K N171Q",5
"lib2","SARS-CoV-2","CAGCCCATGAGGATAA",9,82.83,10.83,0,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCCCCAAACCTTGT",16,159.58,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S45W R124W",2
"lib2","SARS-CoV-2","CAGCCCCAAATCGTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","G83C D90Y T100D K114* L122R P149E T201C",7
"lib2","SARS-CoV-2","CAGCCCCACTTTATAG",5,105.56,10.63,-0.2,0.03,2.95,1.04,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","CAGCCCCTCAAACCAG",2,5.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K V77L N118I",3
"lib2","SARS-CoV-2","CAGCCCGATTCCCTGA",2,28.54,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A22C A81P V103Y",3
"lib2","SARS-CoV-2","CAGCCCGCCCTAATAA",3,26.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28N C49L N107L",3
"lib2","SARS-CoV-2","CAGCCCGCTAAGTACA",1,15.68,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F44Y G86V T100S",3
"lib2","SARS-CoV-2","CAGCCCGCTGTTGAAG",10,43.08,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5A G83F A105E T140C N151M G166M G174K",7
"lib2","SARS-CoV-2","CAGCCCGTATCACGCA",6,1.08,NA,NA,NA,NA,NA,NA,"stop","D59* D112Q",2
"lib2","SARS-CoV-2","CAGCCCTACTCACATT",10,127.91,6,-4.84,1.44,1.5,1.13,0.01,">1 nonsynonymous","L57M D98L L131G V173E",4
"lib2","SARS-CoV-2","CAGCCCTCGACTGCTT",6,26.93,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P7T P54L Y91S G146V",4
"lib2","SARS-CoV-2","CAGCCCTGCTCCCCTG",2,17.58,9.75,-1.09,0.14,2.52,1,0.01,">1 nonsynonymous","S29L F62S S129V",3
"lib2","SARS-CoV-2","CAGCCGAAAACAACTA",4,34.82,10.78,-0.05,0.06,2.9,1.11,0,">1 nonsynonymous","T100Y T140A",2
"lib2","SARS-CoV-2","CAGCCGAAATACAACA",4,5.03,9.14,-1.69,0.21,2.68,1,0.01,">1 nonsynonymous","K56L L95H",2
"lib2","SARS-CoV-2","CAGCCGCCTAGGCTCT",4,71.87,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N4L F62L S69R N107G N120F E141S P149H",7
"lib2","SARS-CoV-2","CAGCCGGAATTGATGT",6,91.08,6.91,-3.93,0.41,1.5,1.23,0.03,">1 nonsynonymous","C31K N40I D59W",3
"lib2","SARS-CoV-2","CAGCCGGTGTCCCCGC",1,22.31,10.74,-0.1,0.07,2.87,1.14,0,">1 nonsynonymous","L122H S147T",2
"lib2","SARS-CoV-2","CAGCCGTTGCACCCTT",2,169.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V11P T46K I88V L122I E141G L183T",6
"lib2","SARS-CoV-2","CAGCCGTTTTTTACCA",11,40.24,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N4R R16S P96Y Y121F F134T P161F P169R",7
"lib2","SARS-CoV-2","CAGCCTAAAAGCTTTA",2,39.71,10.13,-0.71,0.07,2.64,1.09,0,">1 nonsynonymous","Y35S V37L S129Y",3
"lib2","SARS-CoV-2","CAGCCTAACTAAGAGT",8,51.51,9,-1.83,0.12,1.52,1.11,0.01,">1 nonsynonymous","A33L C61G V65P",3
"lib2","SARS-CoV-2","CAGCCTAATAAAACTA",15,63.97,9.29,-1.55,0.21,1.5,1.01,0.02,">1 nonsynonymous","S45D V103K",2
"lib2","SARS-CoV-2","CAGCCTCATAATGCGC",4,32.76,10.58,-0.25,0.07,2.94,1.04,0,">1 nonsynonymous","S41L T55F A190L",3
"lib2","SARS-CoV-2","CAGCCTCTCGCATCTA",2,19.82,10.05,-0.79,0.1,2.61,1.13,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CAGCCTTACGTGATTA",14,338.24,9.53,-1.31,0.06,2.52,1.07,0,">1 nonsynonymous","V37E P161Q T201S",3
"lib2","SARS-CoV-2","CAGCCTTCGGCATTCG",2,35.43,6.88,-3.96,0.48,1.66,1.11,0.04,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","CAGCCTTGACTTAAAT",11,7.03,NA,NA,NA,NA,NA,NA,"stop","K48* D98A",2
"lib2","SARS-CoV-2","CAGCCTTTATGAGAAA",6,67.67,9.81,-1.03,0.06,2.82,1.1,0,">1 nonsynonymous","Y121A S200G",2
"lib2","SARS-CoV-2","CAGCGAAAACGAAGCT",2,35.3,8.32,-2.52,0.11,2.81,1.01,0,">1 nonsynonymous","Y35L S113Q T140S S200M",4
"lib2","SARS-CoV-2","CAGCGAAAACTCTTCG",4,19.45,6,-4.84,2,3,1.04,0,">1 nonsynonymous","L57C V77N C158S",3
"lib2","SARS-CoV-2","CAGCGAAACGATATGG",2,11,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S41L I88W D97M K128F F160Q",5
"lib2","SARS-CoV-2","CAGCGAAACTTGACAT",5,14.67,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","L60R R124P I138S",3
"lib2","SARS-CoV-2","CAGCGAACGCATTATT",7,50.91,10.24,-0.59,0.12,2.43,1.06,0.01,"1 nonsynonymous","E76C",1
"lib2","SARS-CoV-2","CAGCGAACGTTTCACT",2,46.13,10.14,-0.7,0.07,2.74,1.09,0,">1 nonsynonymous","I138G G152S",2
"lib2","SARS-CoV-2","CAGCGAATTTAAGTAA",2,68.9,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14L F47V D90V S139D Y175C",5
"lib2","SARS-CoV-2","CAGCGAGATTACAACC",9,79.34,6,-4.84,1.73,1.5,1.25,0.04,">1 nonsynonymous","Y35N S53F K114M E135V A145G Y165S",6
"lib2","SARS-CoV-2","CAGCGAGGTATCTTAT",17,142.79,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y35C D112M G146W",3
"lib2","SARS-CoV-2","CAGCGAGTACACGCTT",10,18.32,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2N T15N N64F F70Y E76G F99S S139T",7
"lib2","SARS-CoV-2","CAGCGAGTACTAATCT",4,95.08,10.36,-0.48,0.03,2.91,1.06,0,">1 nonsynonymous","K56G N110H K114H I138R Q163G",5
"lib2","SARS-CoV-2","CAGCGATAATAACTGT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N107* I142Y",2
"lib2","SARS-CoV-2","CAGCGATAATTCCCGG",7,45.07,10.82,-0.01,0.03,2.97,1.03,0,"1 nonsynonymous","S53N",1
"lib2","SARS-CoV-2","CAGCGATACATACGGG",3,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F99C I142A P149T",4
"lib2","SARS-CoV-2","CAGCGATCATTAGACG",13,137.6,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N107D T140V Q168P",3
"lib2","SARS-CoV-2","CAGCGATCCACCAGAC",2,19.3,8.94,-1.89,0.18,1.57,1.33,0.02,">1 nonsynonymous","N58M L162A",2
"lib2","SARS-CoV-2","CAGCGATGATGGTCAA",5,31.08,8.7,-2.14,0.28,1.9,1.11,0.04,">1 nonsynonymous","T3S L95I Y143E N171I T201R",5
"lib2","SARS-CoV-2","CAGCGCAAAAATTGTA",1,6.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106D N120C K128N",3
"lib2","SARS-CoV-2","CAGCGCAAATAAAGTG",6,65.4,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","L95P F167H S184G",3
"lib2","SARS-CoV-2","CAGCGCCTCTGTTTTT",8,133.33,10.92,0.08,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCGCTGGAGACCTA",6,34.89,10.77,-0.07,0.06,2.69,1.05,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","CAGCGGAAAAGCTAAC",4,95.25,10.6,-0.24,0.02,2.95,1.05,0,"1 nonsynonymous","A89P",1
"lib2","SARS-CoV-2","CAGCGGAAACCAATTC",2,12.6,10.9,0.07,0.1,2.87,1.1,0,"1 nonsynonymous","S184W",1
"lib2","SARS-CoV-2","CAGCGGAATTAAAAAT",5,6.83,NA,NA,NA,NA,NA,NA,"stop","C6* P133E P169L Y175*",4
"lib2","SARS-CoV-2","CAGCGGAATTTCAAGA",7,132.99,8.68,-2.16,0.06,2.64,1.12,0,">1 nonsynonymous","K56L N120S F126S",3
"lib2","SARS-CoV-2","CAGCGGATTTGGTGGC",2,17.89,9.31,-1.53,0.08,2.88,1.09,0,">1 nonsynonymous","G51M F156V T201D",3
"lib2","SARS-CoV-2","CAGCGGCTAAACCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A V65D Q84N Y91Q F156S",5
"lib2","SARS-CoV-2","CAGCGGGAAACACCCA",1,40.13,10.59,-0.24,0.05,2.83,1.06,0,">1 nonsynonymous","L5I L60S K128N T148Q Q163Y",5
"lib2","SARS-CoV-2","CAGCGGGAGATGAGAC",14,309.17,8,-2.84,0.07,1.75,1.12,0,">1 nonsynonymous","N4I S36E Y175V T201L",4
"lib2","SARS-CoV-2","CAGCGGGAGGCGAATT",10,111.51,10.6,-0.24,0.03,2.97,1.03,0,">1 nonsynonymous","D90A N151D",2
"lib2","SARS-CoV-2","CAGCGGGGTTAAAAAA",3,67.94,10.01,-0.82,0.08,2.77,1.05,0,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","CAGCGGTAGGTCCGCA",2,124.48,10.68,-0.16,0.03,2.9,1.09,0,">1 nonsynonymous","K87H L122M",2
"lib2","SARS-CoV-2","CAGCGGTGAATCTACG",15,66.76,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A14T S43L G51I C61T G152C",5
"lib2","SARS-CoV-2","CAGCGTACGTAACTAA",3,19.83,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","K56Q K87M D90V D137I",4
"lib2","SARS-CoV-2","CAGCGTACTCTGAAAG",11,33.93,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N13V I72R",2
"lib2","SARS-CoV-2","CAGCGTCATATGAATT",10,2.17,NA,NA,NA,NA,NA,NA,"stop","N24I I88* T170F",3
"lib2","SARS-CoV-2","CAGCGTCCATTAGAAA",4,63.47,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N4K I28G C150T",3
"lib2","SARS-CoV-2","CAGCGTGCGGCTCCCA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","F8L S43* R136T T201*",4
"lib2","SARS-CoV-2","CAGCGTTAACTTGACT",6,114.74,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44N L60A A67C D98Y I142K N151K Y159G",7
"lib2","SARS-CoV-2","CAGCGTTGAACAATCG",4,1.23,NA,NA,NA,NA,NA,NA,"stop","C31L Y143N L162*",3
"lib2","SARS-CoV-2","CAGCGTTGCCCATTAA",11,3.47,NA,NA,NA,NA,NA,NA,"stop","N107T G146I C150V L162*",4
"lib2","SARS-CoV-2","CAGCGTTTAACCTGTG",2,54.61,10.2,-0.63,0.03,2.95,1.05,0,">1 nonsynonymous","G9K K87H D97C",3
"lib2","SARS-CoV-2","CAGCGTTTTGTTCCAA",4,41.73,9.5,-1.33,0.14,2,1.14,0.01,">1 nonsynonymous","N1G Y165V",2
"lib2","SARS-CoV-2","CAGCTAAAAAATCCAA",13,2.41,NA,NA,NA,NA,NA,NA,"stop","F47I T100K C158* L183P",4
"lib2","SARS-CoV-2","CAGCTAAAAGAATGCG",6,24.76,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","I2S W23K G86Q",3
"lib2","SARS-CoV-2","CAGCTAAACTACACAC",3,92.05,10.35,-0.48,0.06,2.77,1,0,">1 nonsynonymous","N13W V52I",2
"lib2","SARS-CoV-2","CAGCTAAAGTAACAGT",15,0.8,NA,NA,NA,NA,NA,NA,"stop","F44* D97E R127S G172A",4
"lib2","SARS-CoV-2","CAGCTAACTATGACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L P169I S184P T201M",4
"lib2","SARS-CoV-2","CAGCTAAGTATCCAGC",14,105.97,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N107S N157Y G174R",3
"lib2","SARS-CoV-2","CAGCTAAGTTGCAACT",13,4.98,NA,NA,NA,NA,NA,NA,"stop","Y39* D98L F160H P177K L183F",5
"lib2","SARS-CoV-2","CAGCTAATAGCTCCAT",6,46.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K48W K56Y N120M I138A G146W T170L R179F",7
"lib2","SARS-CoV-2","CAGCTAATATGTGTTC",4,51.22,6.19,-4.65,0.93,1.5,1.19,0.02,">1 nonsynonymous","I2F S36L K94G Y143C",4
"lib2","SARS-CoV-2","CAGCTACAGAACGCCA",3,506.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51F A89L K94L",3
"lib2","SARS-CoV-2","CAGCTACCAACGAATA",1,18.37,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S113K E141S P149G Q163S V173Q",5
"lib2","SARS-CoV-2","CAGCTACCAATAAACC",7,100.55,6,-4.84,1.19,1.5,1.15,0.01,">1 nonsynonymous","L5M Y39C Q84G R124P S139D N157A L162T",7
"lib2","SARS-CoV-2","CAGCTACGCGCTAAAA",4,62.25,10.66,-0.17,0.05,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCTACGGAATTCAA",2,6.8,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","A89Y I104M L122H C150M",4
"lib2","SARS-CoV-2","CAGCTACGTACCTCAC",7,61.84,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","C61L S139F Q176S",3
"lib2","SARS-CoV-2","CAGCTACTGTCTATCG",2,63.84,10.6,-0.24,0.04,2.87,1.14,0,">1 nonsynonymous","N30S T46L",2
"lib2","SARS-CoV-2","CAGCTAGAGAAGATGG",9,61.24,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","E10L T63E V103R",3
"lib2","SARS-CoV-2","CAGCTAGAGGACACCC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","G9L D97S F156*",3
"lib2","SARS-CoV-2","CAGCTAGATGACACAA",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92Y T170F",2
"lib2","SARS-CoV-2","CAGCTAGTAATTGGAA",3,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C C49R T55E",3
"lib2","SARS-CoV-2","CAGCTATAAAGATAAA",6,9.87,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15H G51S D59Y I72M D98N N107L Y119L K128N",8
"lib2","SARS-CoV-2","CAGCTATCTAGCGCAT",5,86.04,9.89,-0.95,0.06,2.83,1.1,0,">1 nonsynonymous","T3A Y35F D112E",3
"lib2","SARS-CoV-2","CAGCTATCTATAATAG",3,36.36,8.29,-2.54,0.22,1.9,1.07,0.02,">1 nonsynonymous","V103L L125V",2
"lib2","SARS-CoV-2","CAGCTATCTCATGACA",4,97.07,9.88,-0.96,0.09,2.22,1.04,0,">1 nonsynonymous","L38T K198L",2
"lib2","SARS-CoV-2","CAGCTATGACTATATA",1,19.2,10.83,-0.01,0.07,2.85,1.17,0,">1 nonsynonymous","V37I N64H",2
"lib2","SARS-CoV-2","CAGCTCAAATGACGAT",9,56.12,6.17,-4.66,0.53,1.5,1.15,0.01,">1 nonsynonymous","N30M C61S L131S",3
"lib2","SARS-CoV-2","CAGCTCAATAATAATA",7,0.23,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","CAGCTCACCCCATAGA",4,79.2,9.95,-0.89,0.1,2.24,1.08,0,">1 nonsynonymous","G9S S45C W106C",3
"lib2","SARS-CoV-2","CAGCTCAGGTCAAAAA",6,13.07,7.55,-3.29,0.46,1.5,1.03,0.06,">1 nonsynonymous","P149S V181H",2
"lib2","SARS-CoV-2","CAGCTCATATAAAGTC",17,220.99,10.85,0.02,0.04,2.95,1.06,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","CAGCTCATGGCTTAAA",3,24.92,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F17S R25T N120Y",3
"lib2","SARS-CoV-2","CAGCTCCCCCCCGACT",14,27.64,7.92,-2.92,0.26,1.5,1.23,0.02,">1 nonsynonymous","D34I W106L E141T",3
"lib2","SARS-CoV-2","CAGCTCCGACACCTAT",2,19.51,10.92,0.09,0.09,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCTCCGATCCTAAA",5,59.96,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N64L V77R Y178H F185S",4
"lib2","SARS-CoV-2","CAGCTCGCTGTTGCAG",3,0.09,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","CAGCTCTAATACATTA",2,27.4,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","I2Y G172I T201S",3
"lib2","SARS-CoV-2","CAGCTCTAGGTACTGG",16,67.86,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","S41E T85G Y93Q F99E A105N",5
"lib2","SARS-CoV-2","CAGCTCTCATACGGAT",6,116.16,9.57,-1.27,0.06,2.87,1.04,0,">1 nonsynonymous","S43N G146N",2
"lib2","SARS-CoV-2","CAGCTCTGATCTTATT",4,24.32,6.01,-4.83,1.47,1.5,1.11,0.03,">1 nonsynonymous","D59V Y119L C150G",3
"lib2","SARS-CoV-2","CAGCTCTGCGTCATTT",7,2.38,NA,NA,NA,NA,NA,NA,"stop","S19V D59S Y143* F160T",4
"lib2","SARS-CoV-2","CAGCTCTTTATTGTAC",1,2.33,NA,NA,NA,NA,NA,NA,"stop","D68R G86W L162* V173L",4
"lib2","SARS-CoV-2","CAGCTGAAATTTACCA",4,42.85,10.12,-0.72,0.1,2.62,1.02,0.01,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","CAGCTGAATGGATACA",3,31.5,10.81,-0.03,0.04,2.97,1.04,0,"1 nonsynonymous","P54Y",1
"lib2","SARS-CoV-2","CAGCTGAATTTACTGT",2,31.18,10.79,-0.04,0.05,2.99,1.01,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","CAGCTGATCCACCGCC",2,62.87,10.02,-0.82,0.07,2.39,1.08,0,">1 nonsynonymous","F44I K56W",2
"lib2","SARS-CoV-2","CAGCTGCAAAAGAATC",4,106.47,8.27,-2.57,0.13,2.18,1.09,0.01,">1 nonsynonymous","G51V C61T Y119T",3
"lib2","SARS-CoV-2","CAGCTGCGAAAAAAGA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71N G146H G152P",3
"lib2","SARS-CoV-2","CAGCTGGCTTTTCAAG",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P A105S N120F R136N",4
"lib2","SARS-CoV-2","CAGCTGTACATATTGG",1,23.14,10.47,-0.37,0.06,3,1.03,0,">1 nonsynonymous","V37K N110G N118E",3
"lib2","SARS-CoV-2","CAGCTGTCAAAGTGGT",6,10.91,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S43H V103N E135A",3
"lib2","SARS-CoV-2","CAGCTGTGAATAAGTA",5,77.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S L95A",2
"lib2","SARS-CoV-2","CAGCTGTTAAACGACA",6,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74C G86M V173P Y178S",4
"lib2","SARS-CoV-2","CAGCTGTTTGCAGCCG",2,24.36,10.24,-0.6,0.05,2.94,1.03,0,">1 nonsynonymous","E10L T85V",2
"lib2","SARS-CoV-2","CAGCTTAAAAGCCATC",4,12.94,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A18F L95W V115A",3
"lib2","SARS-CoV-2","CAGCTTAAACTCCAAA",4,52.82,6,-4.84,1.61,1.5,1.14,0.01,">1 nonsynonymous","E10R C61M L95S G155N Q176A",5
"lib2","SARS-CoV-2","CAGCTTAAAGTGAAAG",9,94.71,10.34,-0.5,0.04,2.92,1.06,0,">1 nonsynonymous","T55C I138Q",2
"lib2","SARS-CoV-2","CAGCTTAACAAGACAC",2,9.07,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N58D V103R",2
"lib2","SARS-CoV-2","CAGCTTAACGGAAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112G F167A",2
"lib2","SARS-CoV-2","CAGCTTAAGTTTGCTG",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S P96S",2
"lib2","SARS-CoV-2","CAGCTTAATAATTTTC",3,18.07,8.65,-2.19,0.14,2.34,1.06,0.01,">1 nonsynonymous","L60E Y91T",2
"lib2","SARS-CoV-2","CAGCTTACATCTATTG",2,31.47,8.15,-2.69,0.17,1.97,1.06,0.01,">1 nonsynonymous","P133I I142A V173A",3
"lib2","SARS-CoV-2","CAGCTTACCACCAACT",1,8.35,8.71,-2.13,0.38,1.63,1.08,0.07,">1 nonsynonymous","F8V Y121Q Q176N",3
"lib2","SARS-CoV-2","CAGCTTACTTCAATAA",6,5.4,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","A42P K48V T100P I138P",4
"lib2","SARS-CoV-2","CAGCTTAGAATCTCGT",3,69.43,10.85,0.01,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCTTCACCCGCCAT",3,36.6,11.03,0.2,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGCTTCATAGTCAGC",4,4.65,NA,NA,NA,NA,NA,NA,"stop","S19* L95R K128V",3
"lib2","SARS-CoV-2","CAGCTTCCTAAAATTT",16,118.05,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N40L D59Y K87Y S139W V173F",5
"lib2","SARS-CoV-2","CAGCTTGCATACACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83T A89Y G166C T170G",4
"lib2","SARS-CoV-2","CAGCTTGGCATCATAT",14,245.25,9.78,-1.05,0.07,2.19,1.05,0,">1 nonsynonymous","N13C N40G T201W",3
"lib2","SARS-CoV-2","CAGCTTGTAAAGGGTA",6,110.7,10.08,-0.75,0.03,2.92,1.04,0,">1 nonsynonymous","C31T C195R",2
"lib2","SARS-CoV-2","CAGCTTTAATTTGGAA",3,11.16,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","I88W P96T Y121L",3
"lib2","SARS-CoV-2","CAGCTTTAGAGAGGAC",6,32.87,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F47D I104K P133Y S139V",4
"lib2","SARS-CoV-2","CAGCTTTAGCCGCAAG",13,154.77,10.78,-0.05,0.05,2.91,1.09,0,"1 nonsynonymous","F44W",1
"lib2","SARS-CoV-2","CAGCTTTCCAACAGAC",6,94.2,10.19,-0.64,0.07,2.3,1.01,0,">1 nonsynonymous","Y39R A81D",2
"lib2","SARS-CoV-2","CAGCTTTGAATTAGCT",3,80.16,10.32,-0.52,0.09,2.6,1.08,0,"1 nonsynonymous","Y123I",1
"lib2","SARS-CoV-2","CAGCTTTGGTAATCTC",6,59.04,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","T63W R127M",2
"lib2","SARS-CoV-2","CAGCTTTTCTAAAAAG",1,7.24,9.72,-1.12,0.3,1.96,1.11,0.02,">1 nonsynonymous","V37L P96M",2
"lib2","SARS-CoV-2","CAGCTTTTGTAGAGAC",7,37.99,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S43G F99T G152Y",3
"lib2","SARS-CoV-2","CAGCTTTTTAGTAGGA",7,65.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S G83C D90F R136C",4
"lib2","SARS-CoV-2","CAGCTTTTTAGTAGTA",10,129.3,10.69,-0.14,0.05,2.89,1.1,0,">1 nonsynonymous","E10S N64T",2
"lib2","SARS-CoV-2","CAGGAAAAACAACTAT",6,40.56,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1I V20K D59S K114Q N120R R179A",6
"lib2","SARS-CoV-2","CAGGAAAATGAACGTA",2,22.09,6.28,-4.56,0.68,1.5,1.25,0.03,">1 nonsynonymous","K56Y V103L T201F",3
"lib2","SARS-CoV-2","CAGGAAAATGGCTCCG",7,59.04,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G101S R124E",2
"lib2","SARS-CoV-2","CAGGAAACAAATCTGT",3,70.51,8.59,-2.24,0.11,2.84,1.11,0,"1 nonsynonymous","S113N",1
"lib2","SARS-CoV-2","CAGGAAAGAAACCAAC",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R P133N G146W",3
"lib2","SARS-CoV-2","CAGGAAAGAATGTCGG",3,420.63,10.11,-0.73,0.03,2.97,1.01,0,">1 nonsynonymous","G9A G152I",2
"lib2","SARS-CoV-2","CAGGAACAAAATGGAC",5,117.22,10.76,-0.08,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGAACAGTCTTATA",17,105.94,6.05,-4.79,0.7,1.5,1.17,0.01,">1 nonsynonymous","K26M G101D",2
"lib2","SARS-CoV-2","CAGGAACATTATAGAA",3,12.37,10.86,0.02,0.12,2.79,1.24,0,"1 nonsynonymous","K26M",1
"lib2","SARS-CoV-2","CAGGAACATTCCGGTA",3,28.86,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","E76F D90V P96V S129N F134V V180F",6
"lib2","SARS-CoV-2","CAGGAACCTACGGCAT",3,0.36,NA,NA,NA,NA,NA,NA,"stop","S43E F99* Y175H S184Q",4
"lib2","SARS-CoV-2","CAGGAACTCCTTTAAT",12,143.18,6.25,-4.59,0.48,1.5,1.15,0.01,">1 nonsynonymous","T63D T85V I138H G166R S184R",5
"lib2","SARS-CoV-2","CAGGAACTCTATGATG",4,0,NA,NA,NA,NA,NA,NA,"stop","A22E Y50T I88* T100L S113L",5
"lib2","SARS-CoV-2","CAGGAAGAAGAATAAT",6,21.5,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","A14L Y93Q E141W",3
"lib2","SARS-CoV-2","CAGGAAGATTTATCAT",1,74.85,8.88,-1.96,0.06,2.89,1.09,0,">1 nonsynonymous","Y119L E141G",2
"lib2","SARS-CoV-2","CAGGAAGCAGACTTTA",2,10.23,10.81,-0.03,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGAAGTATATAATA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","F99* E141F Q168E L183F",4
"lib2","SARS-CoV-2","CAGGAAGTCGTGGCGG",2,8.67,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I104H G146I",2
"lib2","SARS-CoV-2","CAGGAAGTGCTACTTG",1,5.77,6,-4.84,0.74,3,1,0.01,">1 nonsynonymous","G86N T100H Y178C",3
"lib2","SARS-CoV-2","CAGGAATCACTAAAAT",5,14.22,6.05,-4.79,1.28,1.5,1.27,0.04,">1 nonsynonymous","I2G G9L S19T S41L K56E S113D I142K",7
"lib2","SARS-CoV-2","CAGGAATGATTCAAAA",1,24.66,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y39N D90T P96L P133S",4
"lib2","SARS-CoV-2","CAGGAATTTAGAAGAA",1,33.25,8.3,-2.53,0.14,1.82,1.05,0.01,">1 nonsynonymous","P54Y N110L Q176G K199M",4
"lib2","SARS-CoV-2","CAGGACAAACCACCGT",1,9.51,10.84,0,0.08,2.99,1,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","CAGGACAAACCGATCA",1,25.27,10.15,-0.68,0.07,2.92,1.08,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","CAGGACAAATAACCAA",4,52.28,10.82,-0.01,0.05,2.86,1.11,0,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","CAGGACACTATTTGGT",5,41.14,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","I28V Q144K P161N",3
"lib2","SARS-CoV-2","CAGGACACTTCCGGTC",1,34.96,10.21,-0.63,0.04,2.92,1.06,0,">1 nonsynonymous","K56A F156L",2
"lib2","SARS-CoV-2","CAGGACAGGTCCCAAT",22,6.81,NA,NA,NA,NA,NA,NA,"stop","G9* A81I K87L R127V P133T",5
"lib2","SARS-CoV-2","CAGGACCCCAACCACC",19,372.71,8.39,-2.45,0.11,2.89,1.06,0,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","CAGGACCGAGGGCCTG",1,57.56,9.07,-1.77,0.06,2.76,1.1,0,">1 nonsynonymous","F44S L125P S129I",3
"lib2","SARS-CoV-2","CAGGACCTAACATATA",7,127.37,10.79,-0.05,0.03,2.94,1.07,0,">1 nonsynonymous","F62A N151K T201Y",3
"lib2","SARS-CoV-2","CAGGACGAACACTAAC",6,89.32,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","V37M I88E F126P A145S N171K",5
"lib2","SARS-CoV-2","CAGGACGCTCAGTCCG",7,87.88,10.25,-0.58,0.06,2.82,1.06,0,">1 nonsynonymous","K48M A145T",2
"lib2","SARS-CoV-2","CAGGACGTGGTTTGAC",8,41.27,8.53,-2.3,0.16,2.59,1.04,0.01,">1 nonsynonymous","N107A N118T",2
"lib2","SARS-CoV-2","CAGGACTAACGAGTAC",1,134.11,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L125E G166F",2
"lib2","SARS-CoV-2","CAGGACTCAGCCATCC",5,127.14,10.72,-0.12,0.03,3,1.01,0,">1 nonsynonymous","G83N S139D",2
"lib2","SARS-CoV-2","CAGGACTCTCCTCCAC",12,42.28,9.74,-1.1,0.16,1.97,1.1,0.01,">1 nonsynonymous","T15Y R136L",2
"lib2","SARS-CoV-2","CAGGACTCTGGCACCA",4,87.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10F Y50L A89C",3
"lib2","SARS-CoV-2","CAGGAGAATAGCTCAG",4,57.93,6.28,-4.55,0.64,1.5,1.13,0.02,">1 nonsynonymous","L5T V77E D90Y",3
"lib2","SARS-CoV-2","CAGGAGAATAGTATCT",3,21.69,9.98,-0.86,0.11,2.17,1.04,0.01,">1 nonsynonymous","N58M R127G",2
"lib2","SARS-CoV-2","CAGGAGACAGTAAATA",3,3.79,NA,NA,NA,NA,NA,NA,"stop","R27K D59* P96N V173S V181Q",5
"lib2","SARS-CoV-2","CAGGAGATCAGAAACG",4,0.14,NA,NA,NA,NA,NA,NA,"stop","C6* F17I N58R G83Y R127D",5
"lib2","SARS-CoV-2","CAGGAGATCATGATGG",4,92.36,8.99,-1.85,0.08,2.3,1.16,0,">1 nonsynonymous","P7R A33V N58K R73L T140S",5
"lib2","SARS-CoV-2","CAGGAGATGATTTTAT",1,7.16,10.86,0.02,0.11,2.99,1.02,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","CAGGAGATTGTTGTCC",3,0,NA,NA,NA,NA,NA,NA,"stop","V37F T85* P96S",3
"lib2","SARS-CoV-2","CAGGAGCAAAGGGGAG",1,0.29,NA,NA,NA,NA,NA,NA,"stop","R27M Y39* H189F",3
"lib2","SARS-CoV-2","CAGGAGCATAAAAGTG",8,89.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37Y R73N G146I T201V",4
"lib2","SARS-CoV-2","CAGGAGCGCACAATAA",12,169.75,10.17,-0.67,0.04,2.82,1.04,0,">1 nonsynonymous","S45A D90C",2
"lib2","SARS-CoV-2","CAGGAGCTCCTACTAG",11,157.95,6,-4.84,1.62,1.5,1.15,0.01,">1 nonsynonymous","R25V S45V L60V R127N E141F",5
"lib2","SARS-CoV-2","CAGGAGCTGGCCAGAA",1,20.12,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","S19V D90F I142N",3
"lib2","SARS-CoV-2","CAGGAGGACCACGAAC",8,13.5,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","C49K N130A F160D G166I V173E",5
"lib2","SARS-CoV-2","CAGGAGGTTCAGTACT",5,61.03,9.88,-0.96,0.13,2.17,1.06,0.01,">1 nonsynonymous","T15F N58A P96A P197M",4
"lib2","SARS-CoV-2","CAGGAGTATTAACCAA",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S A42N F99N",3
"lib2","SARS-CoV-2","CAGGAGTGACGCGTAA",6,90.91,10.87,0.03,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGAGTGTTTTACTA",11,159.2,6.11,-4.73,0.94,1.5,1.23,0.02,">1 nonsynonymous","R136P P149S Y178W",3
"lib2","SARS-CoV-2","CAGGAGTTATATTTGG",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C K94P",2
"lib2","SARS-CoV-2","CAGGAGTTCCAATCAG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S D59K V103T L122M",4
"lib2","SARS-CoV-2","CAGGATAACAGACAGG",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L Y143C G155L Q163S",4
"lib2","SARS-CoV-2","CAGGATAAGACATTTG",3,19.79,10.78,-0.05,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGATACACAAATTA",4,53.65,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V37D D68T Y93S G166R",4
"lib2","SARS-CoV-2","CAGGATAGAAACTGAG",5,141.06,10.23,-0.61,0.04,2.74,1.01,0,"1 nonsynonymous","P133K",1
"lib2","SARS-CoV-2","CAGGATAGAATTGATA",3,31.77,10.59,-0.24,0.06,2.85,1.15,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","CAGGATAGATAACATA",11,62.05,6.13,-4.7,1.03,1.5,1.26,0.02,">1 nonsynonymous","N4S A33V D68H C102W Y175S",5
"lib2","SARS-CoV-2","CAGGATAGGATAATCA",3,21.96,10.78,-0.06,0.04,3,1.02,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","CAGGATATACAAAAAC",3,12.37,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G86R V182T L183I",3
"lib2","SARS-CoV-2","CAGGATATAGAACGCA",2,113.95,10.21,-0.62,0.06,2.61,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGATATGCGCCCGG",4,28.15,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T46Y L125S P133T P161R V173L",5
"lib2","SARS-CoV-2","CAGGATCACAACGAAT",7,108.35,10.47,-0.37,0.04,2.95,1.02,0,">1 nonsynonymous","N30H K56T V103I",3
"lib2","SARS-CoV-2","CAGGATCCCAGACTAT",8,152.59,10.46,-0.38,0.04,2.9,1.04,0,">1 nonsynonymous","P96N S200G",2
"lib2","SARS-CoV-2","CAGGATCTAAACATAC",2,1.83,NA,NA,NA,NA,NA,NA,"stop","E10K A33P G116S T148A V173* K199*",6
"lib2","SARS-CoV-2","CAGGATCTCTCACATT",2,12.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12R A42C W106Y",3
"lib2","SARS-CoV-2","CAGGATGAAACTTATA",1,47.56,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14Y L38C D112P D137M G155L A192Q",6
"lib2","SARS-CoV-2","CAGGATGACAACAAAA",8,42.62,10.73,-0.1,0.03,2.96,1.05,0,"1 nonsynonymous","A18Q",1
"lib2","SARS-CoV-2","CAGGATTAAGAAACAC",3,20.19,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F17K I28V P96L",3
"lib2","SARS-CoV-2","CAGGATTAGAGAAAAG",3,14.14,6,-4.84,2,3,1.11,0.02,">1 nonsynonymous","D98H I104Q R127A",3
"lib2","SARS-CoV-2","CAGGATTCTGTGTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","D90T K128*",2
"lib2","SARS-CoV-2","CAGGATTGCTATCCAT",9,101.79,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","K48L R124D V153M",3
"lib2","SARS-CoV-2","CAGGATTTAAGCAACA",3,56.11,9.95,-0.89,0.08,2.9,1.04,0,">1 nonsynonymous","Y39R T55Y N110G N151L T170W",5
"lib2","SARS-CoV-2","CAGGATTTAGAATTTA",6,53.2,9.25,-1.59,0.09,1.84,1.13,0,">1 nonsynonymous","V11A S29H D90Q K114N",4
"lib2","SARS-CoV-2","CAGGATTTAGACTATG",2,28.11,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","W106C N120L S129L T148C T170M",5
"lib2","SARS-CoV-2","CAGGCAAAACATAATG",21,122.82,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F44C F99V D112S",3
"lib2","SARS-CoV-2","CAGGCAAAACTGTATT",7,44.95,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N64V F167S",2
"lib2","SARS-CoV-2","CAGGCAAATTAACTGC",11,38.89,8.26,-2.57,0.13,2.14,1.09,0.01,">1 nonsynonymous","D59K D75L N118H",3
"lib2","SARS-CoV-2","CAGGCAACCGTTTTAC",2,0.61,NA,NA,NA,NA,NA,NA,"stop","N4G S19K D90I G101* Y123Q",5
"lib2","SARS-CoV-2","CAGGCAATAGGAAAGC",1,117.4,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A145W Q176A",2
"lib2","SARS-CoV-2","CAGGCAATGAACTAGG",2,23.6,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","I104K Y119S",2
"lib2","SARS-CoV-2","CAGGCACAAAAATAGC",7,60.94,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D97I G116N R124G",3
"lib2","SARS-CoV-2","CAGGCACAACAACAGT",9,91.65,10.55,-0.28,0.05,2.93,1.08,0,">1 nonsynonymous","G9R I142L",2
"lib2","SARS-CoV-2","CAGGCACCAGAACCTT",3,25.15,10.02,-0.82,0.11,2.79,1.04,0.01,">1 nonsynonymous","C6P F62V",2
"lib2","SARS-CoV-2","CAGGCACCCCTCCGCG",4,9.75,NA,NA,NA,NA,NA,NA,"stop","V77L G83* C102V",3
"lib2","SARS-CoV-2","CAGGCACGTTAACCAG",1,13.11,6.29,-4.55,0.53,1.5,1.06,0.01,">1 nonsynonymous","K56S L95P N157P",3
"lib2","SARS-CoV-2","CAGGCAGCCGGCGCAC",15,263.14,9.78,-1.06,0.09,2.11,1.05,0,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","CAGGCATAAACTAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91R F167* P177R",3
"lib2","SARS-CoV-2","CAGGCATTCAGACGAG",4,56.7,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L5V S129G C150L L162F",4
"lib2","SARS-CoV-2","CAGGCCACGGTCCACA",1,2.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","CAGGCCCGGGGGTCTA",4,79.7,9.07,-1.77,0.05,2.88,1.1,0,">1 nonsynonymous","A42R Y119W P149V",3
"lib2","SARS-CoV-2","CAGGCCTACGGACGTG",8,28.72,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14D V77P V103S",3
"lib2","SARS-CoV-2","CAGGCCTTCAATACGC",6,0,NA,NA,NA,NA,NA,NA,"stop","A14M Y39H S69*",3
"lib2","SARS-CoV-2","CAGGCGAATAAATAAC",5,107.35,10.41,-0.43,0.04,2.79,1.12,0,"1 nonsynonymous","E135N",1
"lib2","SARS-CoV-2","CAGGCGAATCCGTCAC",3,0.37,NA,NA,NA,NA,NA,NA,"stop","C6F Q84* Y93M",3
"lib2","SARS-CoV-2","CAGGCGACTACGGATT",3,18.55,10.16,-0.68,0.13,2.69,1,0.01,"1 nonsynonymous","V181C",1
"lib2","SARS-CoV-2","CAGGCGCAGATACCAT",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V F99V L131K G152S L162E",5
"lib2","SARS-CoV-2","CAGGCGCATATACAAT",12,217.92,10.64,-0.2,0.02,2.96,1.03,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","CAGGCGCGGTACCAAT",1,12.47,10.16,-0.67,0.07,2.91,1.07,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","CAGGCGCGTAGCCGCC",12,64.09,11.13,0.29,0.04,2.93,1.06,0,">1 nonsynonymous","T3D N171T",2
"lib2","SARS-CoV-2","CAGGCGCTCTTTAACA",2,58.76,10.01,-0.82,0.07,2.64,1.02,0,">1 nonsynonymous","P54D A67F",2
"lib2","SARS-CoV-2","CAGGCGGATCATTAAC",1,10.58,10.88,0.04,0.1,2.94,1.07,0,">1 nonsynonymous","I2A Y50W N151S",3
"lib2","SARS-CoV-2","CAGGCGTTCTGGATGC",3,0,NA,NA,NA,NA,NA,NA,"stop","G51P L57P D68* D98A Y119R S139V Y165K T170M V180A",9
"lib2","SARS-CoV-2","CAGGCTAATGATCATG",7,128.72,9.46,-1.37,0.1,1.98,1.06,0,">1 nonsynonymous","N4C F12I G152M V181I T201R",5
"lib2","SARS-CoV-2","CAGGCTACATTGCCAA",10,68.42,6,-4.84,0.86,1.5,1.1,0,">1 nonsynonymous","L57N Y123N C150F Y159C",4
"lib2","SARS-CoV-2","CAGGCTACGTTAGACA",7,144.14,10.84,0.01,0.04,2.95,1.06,0,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","CAGGCTAGACGTGGAG",14,174.6,10.22,-0.62,0.04,2.73,1.04,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","CAGGCTAGGACCACCA",2,32.63,9.78,-1.06,0.15,2.03,1.09,0.02,">1 nonsynonymous","E10F E135H V173L",3
"lib2","SARS-CoV-2","CAGGCTATGCAATACT",3,15.83,10.04,-0.79,0.35,1.5,1,0.07,">1 nonsynonymous","S69G T140C",2
"lib2","SARS-CoV-2","CAGGCTATTCTCCGAT",10,3.13,NA,NA,NA,NA,NA,NA,"stop","G116V G166* P169R",3
"lib2","SARS-CoV-2","CAGGCTCACGAATAGC",3,92.92,10.79,-0.04,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGCTCGCCGCGGAT",7,91.65,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C6D Y93S P149W",3
"lib2","SARS-CoV-2","CAGGCTGATTCCCTAA",4,85.28,10.32,-0.52,0.05,2.92,1.1,0,">1 nonsynonymous","L5R G9R D98T",3
"lib2","SARS-CoV-2","CAGGCTTAAAAAATAA",3,19.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14V Y35E P96L H189A",4
"lib2","SARS-CoV-2","CAGGCTTACAGTGACA",2,119.5,9.85,-0.99,0.07,2.83,1.13,0,"1 nonsynonymous","Q176H",1
"lib2","SARS-CoV-2","CAGGCTTTTAAATTTA",11,212.13,10.82,-0.02,0.04,2.96,1.04,0,"1 nonsynonymous","S200H",1
"lib2","SARS-CoV-2","CAGGCTTTTATATACT",19,166.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K48N Y66I V77E",3
"lib2","SARS-CoV-2","CAGGGAAACTATTTTG",12,51.33,10.39,-0.45,0.09,2.38,1.04,0,">1 nonsynonymous","L60Q Q84F P149R G155S Q163V",5
"lib2","SARS-CoV-2","CAGGGAACCAGTGTGA",3,33.24,9.83,-1,0.03,2.79,1.09,0,">1 nonsynonymous","S45F G116E",2
"lib2","SARS-CoV-2","CAGGGAAGTCAGATAC",5,23.7,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I72R T140L G146V",3
"lib2","SARS-CoV-2","CAGGGAATAACAATGA",21,551.22,10.84,0.01,0.03,2.94,1.07,0,">1 nonsynonymous","I2R P191G",2
"lib2","SARS-CoV-2","CAGGGAATAGGCAAGC",8,65.52,8.15,-2.68,0.22,1.5,1.06,0.02,">1 nonsynonymous","C31S L60P A89T",3
"lib2","SARS-CoV-2","CAGGGAATCACCGTAC",6,116.93,10.21,-0.63,0.03,2.91,1.12,0,">1 nonsynonymous","I2R P169A S200C",3
"lib2","SARS-CoV-2","CAGGGAATTTTCCGAA",8,110.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86D Y143H G196C",3
"lib2","SARS-CoV-2","CAGGGAGTTTGGTATC",17,195.82,9.2,-1.63,0.07,1.76,1.1,0,">1 nonsynonymous","F99V V173N",2
"lib2","SARS-CoV-2","CAGGGATACAACATGT",4,67.86,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G9T I104R D112T Y123F E141I",5
"lib2","SARS-CoV-2","CAGGGATCAAACCTCA",17,138.75,6,-4.84,2,2.38,1.17,0,">1 nonsynonymous","P96V S113P",2
"lib2","SARS-CoV-2","CAGGGCACAAATATGG",2,116.91,10.78,-0.05,0.05,3,1.02,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","CAGGGCACAATTCTTG",17,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R N107M G117N S129T T140N",5
"lib2","SARS-CoV-2","CAGGGCAGATAGCACG",9,109.34,10.24,-0.6,0.06,2.76,1.07,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","CAGGGCATAAACCATG",3,45.07,8.99,-1.84,0.14,1.87,1.11,0.01,">1 nonsynonymous","V37L N107S S139C T201A",4
"lib2","SARS-CoV-2","CAGGGCATAACTCCAT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69G P161V",2
"lib2","SARS-CoV-2","CAGGGCATACCTAAGC",1,8.71,8.91,-1.93,0.4,1.5,1.27,0.05,"1 nonsynonymous","P82C",1
"lib2","SARS-CoV-2","CAGGGCCCAAGACAGT",5,139.18,10.01,-0.82,0.06,2.6,1.06,0,">1 nonsynonymous","F44M C61G Y66W",3
"lib2","SARS-CoV-2","CAGGGCCTACAATTGT",5,20.96,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F70I G83L G86C D137I F167I",5
"lib2","SARS-CoV-2","CAGGGCCTAGACCAAC",6,45.69,10.8,-0.03,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGGCGCGTCCCGTC",5,25.74,6,-4.84,2,1.5,1.38,0.06,">1 nonsynonymous","V77G D90R G116Y",3
"lib2","SARS-CoV-2","CAGGGCTAGGAACTTC",5,8.05,9.84,-1,0.09,2.85,1.14,0,"1 nonsynonymous","T170K",1
"lib2","SARS-CoV-2","CAGGGCTGATACAAAC",7,63.2,10.05,-0.79,0.05,2.95,1.05,0,">1 nonsynonymous","T55L F156Q",2
"lib2","SARS-CoV-2","CAGGGGAACCATGTTT",9,176.69,7.35,-3.49,0.16,1.73,1.08,0.01,">1 nonsynonymous","N58Y Y123S N171D",3
"lib2","SARS-CoV-2","CAGGGGAGTATTCAAA",1,5.15,9.95,-0.89,0.3,2.6,1.09,0.02,">1 nonsynonymous","S43F P133W S200R",3
"lib2","SARS-CoV-2","CAGGGGATCTTGAATC",3,54.53,8.63,-2.21,0.13,1.67,1.12,0.01,">1 nonsynonymous","Y35N Q144Y",2
"lib2","SARS-CoV-2","CAGGGGATGATAGATT",4,71.12,10.84,0,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGGGGCAGATAAGCA",2,12.96,7.43,-3.4,0.47,1.91,1.24,0.05,">1 nonsynonymous","C6G K94N G116Y",3
"lib2","SARS-CoV-2","CAGGGGCCAAGGCATG",4,29.67,8.8,-2.04,0.2,1.76,1.1,0.02,">1 nonsynonymous","N58M K87W F134Q G155K",4
"lib2","SARS-CoV-2","CAGGGGCCTAAAAAGG",6,113.59,9.48,-1.36,0.05,2.08,1.05,0,">1 nonsynonymous","G9T L38F S69M V173C",4
"lib2","SARS-CoV-2","CAGGGGCCTAAATTGC",4,7.5,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44L F62T W106S V173I T201L",5
"lib2","SARS-CoV-2","CAGGGGGAGCTTAACT",5,67.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y121C S139P",2
"lib2","SARS-CoV-2","CAGGGGGATGTATGAG",3,72.7,10.21,-0.63,0.04,2.95,1,0,">1 nonsynonymous","N4P G9Q N64K G116S",4
"lib2","SARS-CoV-2","CAGGGGTCATTCATAA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F G51D T100A A105K",4
"lib2","SARS-CoV-2","CAGGGGTTAGTATTTA",5,21.98,6.08,-4.76,0.84,3,1.19,0.02,">1 nonsynonymous","F62Q D90S V103I D112N K132D R179S",6
"lib2","SARS-CoV-2","CAGGGGTTGACAAGAT",6,97.46,10.99,0.15,0.06,2.95,1.05,0,"1 nonsynonymous","Q163K",1
"lib2","SARS-CoV-2","CAGGGTAAACTAAACT",6,239.79,8.19,-2.64,0.08,2.55,1.08,0,">1 nonsynonymous","N1E S113L",2
"lib2","SARS-CoV-2","CAGGGTACTCCCACCC",2,91.02,9.15,-1.68,0.06,2.87,1.08,0,">1 nonsynonymous","A42I G166T",2
"lib2","SARS-CoV-2","CAGGGTAGCCTAAAGT",7,0.94,NA,NA,NA,NA,NA,NA,"stop","N40H P197*",2
"lib2","SARS-CoV-2","CAGGGTATTACCCCAA",8,97.44,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86L Y91L",2
"lib2","SARS-CoV-2","CAGGGTCGACGAAAAC",3,34.69,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","E10S N24C D90W D98R R136N G152N",6
"lib2","SARS-CoV-2","CAGGGTCGCCGGCGGT",8,67.78,10.84,0,0.06,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGGGTCTTGACGGTG",5,38.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T85K W106K F134I P169I",4
"lib2","SARS-CoV-2","CAGGGTGAGCTTTACT",6,1.97,NA,NA,NA,NA,NA,NA,"stop","F12H A105* G117N",3
"lib2","SARS-CoV-2","CAGGGTGCATCTCAGT",6,24.42,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","V77R S113K E141F",3
"lib2","SARS-CoV-2","CAGGGTGCGTACCTAA",3,10.64,10.61,-0.22,0.11,2.72,1.28,0.01,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","CAGGGTGTCCAAATTA",4,29.63,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","W23I D98M A105G G166L",4
"lib2","SARS-CoV-2","CAGGGTTCGCATTCAA",6,97.75,10.3,-0.54,0.03,2.87,1.06,0,">1 nonsynonymous","G116F K132N",2
"lib2","SARS-CoV-2","CAGGTAAAACGAGAAC",8,122.99,10.8,-0.03,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGTAAAACTGCCAA",6,0.21,NA,NA,NA,NA,NA,NA,"stop","T85E D90L F99* N118Q E135Y C150R K199L",7
"lib2","SARS-CoV-2","CAGGTAAACACTTGAC",14,45.51,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G86A V180K P197K",3
"lib2","SARS-CoV-2","CAGGTAAAGTTTTACA",9,173.12,9.48,-1.35,0.08,1.81,1.08,0,">1 nonsynonymous","I2F F12R",2
"lib2","SARS-CoV-2","CAGGTAACACCCAACG",3,5.44,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","V37E I72Y N157H",3
"lib2","SARS-CoV-2","CAGGTAACCAAAAGGA",23,379.75,10.59,-0.25,0.03,2.91,1.05,0,">1 nonsynonymous","T3S G152F F160R",3
"lib2","SARS-CoV-2","CAGGTAACCGTCAACC",6,12.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6M G101S",2
"lib2","SARS-CoV-2","CAGGTAACGTAAGAGA",4,20.22,7.24,-3.59,0.44,1.5,1.04,0.07,"1 nonsynonymous","V71D",1
"lib2","SARS-CoV-2","CAGGTAAGACAGATGT",4,61.66,8.58,-2.26,0.09,1.55,1.09,0,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","CAGGTAAGTAACAAGG",6,98.68,9.52,-1.31,0.05,2.95,1.07,0,">1 nonsynonymous","F62T K87D",2
"lib2","SARS-CoV-2","CAGGTAATATTGCAGG",4,110.93,8.74,-2.1,0.09,2.38,1.13,0,">1 nonsynonymous","G83V S113G L122T",3
"lib2","SARS-CoV-2","CAGGTAATTACACAGT",2,18.56,10.8,-0.04,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGTAATTGGCGAAA",8,41.83,7.45,-3.38,0.31,1.5,1.16,0.03,"1 nonsynonymous","N107Y",1
"lib2","SARS-CoV-2","CAGGTACAGCAAAAGG",3,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L C61P D98V N120V E154M",5
"lib2","SARS-CoV-2","CAGGTACAGGGTACCC",6,66.48,9.92,-0.92,0.07,2.24,1.05,0,"1 nonsynonymous","V77A",1
"lib2","SARS-CoV-2","CAGGTACATAACCGGA",1,23.15,6,-4.84,2,1.5,1.28,0.08,">1 nonsynonymous","A14L T46S L60Y S113L",4
"lib2","SARS-CoV-2","CAGGTACATAGCTTTC",14,3.93,NA,NA,NA,NA,NA,NA,"stop","N24L A89* N157* K199S",4
"lib2","SARS-CoV-2","CAGGTACATAGTCAGC",2,6.55,10.11,-0.73,0.23,2.53,1.22,0.02,">1 nonsynonymous","G9M A33T F134R G196K",4
"lib2","SARS-CoV-2","CAGGTACATTGAAGAG",4,122.65,10.42,-0.41,0.03,2.88,1.09,0,"1 nonsynonymous","K132P",1
"lib2","SARS-CoV-2","CAGGTATCTAATCGAA",7,52.85,10.7,-0.13,0.07,2.92,1,0,">1 nonsynonymous","N40S K48N",2
"lib2","SARS-CoV-2","CAGGTATGGCTTACCG",4,19.67,9.25,-1.58,0.36,1.5,1.03,0.06,">1 nonsynonymous","V37N T85M W106A",3
"lib2","SARS-CoV-2","CAGGTATGTAATAAAG",3,25.92,9.92,-0.91,0.05,2.35,1.04,0,"1 nonsynonymous","Q84D",1
"lib2","SARS-CoV-2","CAGGTCAGACTTTCAA",5,0.21,NA,NA,NA,NA,NA,NA,"stop","E10K T55*",2
"lib2","SARS-CoV-2","CAGGTCCAATCCATAG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120L V173S",2
"lib2","SARS-CoV-2","CAGGTCGACCCAAATC",10,202.55,10.85,0.02,0.05,2.95,1.07,0,"1 nonsynonymous","A192G",1
"lib2","SARS-CoV-2","CAGGTCGTTTGAAATA",1,22.94,10.03,-0.81,0.1,2.24,1,0,">1 nonsynonymous","T46R R136L",2
"lib2","SARS-CoV-2","CAGGTCTGATAACCCA",8,1.34,NA,NA,NA,NA,NA,NA,"stop","K87S F126* T140F F167Q",4
"lib2","SARS-CoV-2","CAGGTCTGCAAGCATG",2,64.69,9.43,-1.4,0.09,2.49,1.08,0,">1 nonsynonymous","Y121R K198L",2
"lib2","SARS-CoV-2","CAGGTCTGGCCTATAC",1,6.12,9.5,-1.33,0.13,2.78,1,0.01,">1 nonsynonymous","N4Y S36V T63S G116I",4
"lib2","SARS-CoV-2","CAGGTCTTTTCTAGTT",3,17.1,8.02,-2.81,0.15,2.36,1.12,0.01,"1 nonsynonymous","G172S",1
"lib2","SARS-CoV-2","CAGGTGAAAAATAAGA",1,8.23,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","E10D A81Y L95F N151L",4
"lib2","SARS-CoV-2","CAGGTGAAAGTTATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C K199Y",2
"lib2","SARS-CoV-2","CAGGTGAACAACCAAG",5,0.02,NA,NA,NA,NA,NA,NA,"stop","T3R R78L Y123* S129D Q163S",5
"lib2","SARS-CoV-2","CAGGTGAATAAGTCGA",10,139.73,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V37E Q79A V103S G116A G117D",5
"lib2","SARS-CoV-2","CAGGTGAGCCAAAACT",17,259.48,8.79,-2.05,0.05,2.84,1.08,0,">1 nonsynonymous","S69A Y119D",2
"lib2","SARS-CoV-2","CAGGTGCCAGTACAGG",1,31.63,9.68,-1.16,0.11,2.44,1.02,0.01,">1 nonsynonymous","N24I N58L K87H",3
"lib2","SARS-CoV-2","CAGGTGCGTACATTAT",5,53.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51V F99D S129H I142S",4
"lib2","SARS-CoV-2","CAGGTGCTAATTCTAC",2,14.02,8.17,-2.67,0.15,2.02,1.02,0.01,">1 nonsynonymous","G83F E135K G166L",3
"lib2","SARS-CoV-2","CAGGTGGATACCCTCT",4,2.87,NA,NA,NA,NA,NA,NA,"stop","R25E C61* Q84A",3
"lib2","SARS-CoV-2","CAGGTGGTACAAAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* F70E Y121S P197Q",4
"lib2","SARS-CoV-2","CAGGTGTAAGTTAGTG",23,371.37,10.82,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGTGTACGAATTCA",7,51.43,7.39,-3.45,0.21,1.5,1.08,0.03,">1 nonsynonymous","C61D A89L",2
"lib2","SARS-CoV-2","CAGGTGTACTCCGAAT",5,89.42,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F17L T63S Y91C P177T",4
"lib2","SARS-CoV-2","CAGGTTAAAACAAGAA",2,50.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40R L122A R136G Q176S",4
"lib2","SARS-CoV-2","CAGGTTAAATTGAAAA",11,0.3,NA,NA,NA,NA,NA,NA,"stop","T3* T85R P96A",3
"lib2","SARS-CoV-2","CAGGTTAAGCGATTAG",8,85.91,6.02,-4.82,0.55,1.5,1.11,0.01,">1 nonsynonymous","G86V T148I P149Q P197A",4
"lib2","SARS-CoV-2","CAGGTTACCTCTTAAT",2,26.06,6.95,-3.89,0.43,1.5,1.1,0.05,">1 nonsynonymous","N1T T55Y K114L Y121S L162R Q176F K198L",7
"lib2","SARS-CoV-2","CAGGTTAGTTGACGTA",2,26.89,10.78,-0.06,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGTTCAACAATACT",6,66.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19Q S108P A145T",3
"lib2","SARS-CoV-2","CAGGTTCATCGGATCC",1,24.18,10.84,0.01,0.08,2.96,1.05,0,">1 nonsynonymous","R27K K199S",2
"lib2","SARS-CoV-2","CAGGTTCCCCGCTAAG",2,18.25,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L5T V52P G74N D98Y Y119V",5
"lib2","SARS-CoV-2","CAGGTTCGAGACGTAA",3,25.54,9.6,-1.23,0.1,2.29,1.04,0,">1 nonsynonymous","A33L S129A R136C V153G",4
"lib2","SARS-CoV-2","CAGGTTCTATCCCCAT",3,56.47,10.78,-0.05,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGGTTGCCGGCAGTT",3,54.72,6.25,-4.58,0.5,1.5,1.1,0.01,">1 nonsynonymous","Y91V N157K",2
"lib2","SARS-CoV-2","CAGGTTGCTACATAGT",11,102.03,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","I80P N107S E186H",3
"lib2","SARS-CoV-2","CAGGTTGTCGTCAAAG",2,26.62,9.47,-1.36,0.08,2.8,1.04,0,">1 nonsynonymous","N118I S129T",2
"lib2","SARS-CoV-2","CAGGTTTAGCTACATG",7,92.16,7,-3.84,0.32,1.5,1.14,0.02,">1 nonsynonymous","A81H N120S Q176M",3
"lib2","SARS-CoV-2","CAGGTTTGCTGTTGGA",6,64.12,6,-4.84,1.87,1.5,1.12,0.01,"1 nonsynonymous","I88P",1
"lib2","SARS-CoV-2","CAGTAAAAATAATGAA",6,41.26,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23E K48L L60R G86Y D90F C102K",6
"lib2","SARS-CoV-2","CAGTAAAACAAAACCT",2,74.47,10.15,-0.68,0.06,2.84,1.04,0,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","CAGTAAAATCAGATCT",6,32.25,6.27,-4.57,0.7,1.5,1.24,0.03,">1 nonsynonymous","D34P S164I V180E",3
"lib2","SARS-CoV-2","CAGTAAAATTCACCGC",2,43.32,9.92,-0.91,0.07,2.63,1.05,0,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","CAGTAAACACGGATAA",8,149.12,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","K26P N40G T63S K128A I142T",5
"lib2","SARS-CoV-2","CAGTAAACCACGAGTC",7,159,9.82,-1.01,0.07,2.14,1.06,0,">1 nonsynonymous","F47S P149N",2
"lib2","SARS-CoV-2","CAGTAAACGCTGCTTT",4,42.81,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V11P V71L C158L",3
"lib2","SARS-CoV-2","CAGTAAAGCATTTCCA",1,26.91,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5Y S53P D112G F167P Q176P",5
"lib2","SARS-CoV-2","CAGTAAAGTAGTCACC",11,160.27,10.37,-0.47,0.05,2.77,1,0,">1 nonsynonymous","I2Y R127A",2
"lib2","SARS-CoV-2","CAGTAAAGTTCATTGA",6,40.3,9.28,-1.55,0.14,1.78,1.08,0.01,">1 nonsynonymous","W106H G152Q",2
"lib2","SARS-CoV-2","CAGTAAATAAATATAT",3,37.23,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K94C R179T A190T",3
"lib2","SARS-CoV-2","CAGTAAATACACGACA",3,31.42,8.7,-2.14,0.12,1.96,1.19,0.01,"1 nonsynonymous","Y91E",1
"lib2","SARS-CoV-2","CAGTAAATCCGCATAT",5,60.44,10.69,-0.14,0.03,2.96,1,0,">1 nonsynonymous","D90T K198Q",2
"lib2","SARS-CoV-2","CAGTAAATGCCAGTAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F A33S C49N L57V I142S",5
"lib2","SARS-CoV-2","CAGTAAATGCGTGTTA",7,120.41,9.11,-1.73,0.07,2.59,1.05,0,">1 nonsynonymous","T3S A33T T63M N118A S147K",5
"lib2","SARS-CoV-2","CAGTAAATTACTCATT",9,76.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K128F S129I D137W E154F",4
"lib2","SARS-CoV-2","CAGTAAATTCCTATTA",13,13.87,10.08,-0.76,0.18,2.49,1.17,0.01,"1 nonsynonymous","D75K",1
"lib2","SARS-CoV-2","CAGTAACATTCCCCAT",5,37.92,9.41,-1.43,0.12,1.9,1.02,0,">1 nonsynonymous","F12H N130S",2
"lib2","SARS-CoV-2","CAGTAACCGAGACGAG",6,26.8,6.1,-4.74,0.56,1.5,1.09,0.01,">1 nonsynonymous","Y21F A22V I28V N107R N118Q L162M",6
"lib2","SARS-CoV-2","CAGTAACTACGAAGAA",8,146.66,9.72,-1.11,0.09,1.97,1.02,0,">1 nonsynonymous","L38G T55G",2
"lib2","SARS-CoV-2","CAGTAAGAACAGCAAG",6,2.16,NA,NA,NA,NA,NA,NA,"stop","V153* T201E",2
"lib2","SARS-CoV-2","CAGTAAGACACAACTA",2,6.92,8.92,-1.91,0.31,2.49,1,0.01,">1 nonsynonymous","D34S Y119L G152D",3
"lib2","SARS-CoV-2","CAGTAAGACACGACAC",2,19.52,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14R L60G L95F F167L",4
"lib2","SARS-CoV-2","CAGTAAGTATTCTGTG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","K48* N107H P169G P191L",4
"lib2","SARS-CoV-2","CAGTAATACCTAAAAA",2,6.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89D K132R T201M",3
"lib2","SARS-CoV-2","CAGTAATACTAGCACA",7,130.67,8.65,-2.19,0.1,1.96,1.15,0,">1 nonsynonymous","V37K D90G P149S V153P P197R",5
"lib2","SARS-CoV-2","CAGTAATATCCTTATC",4,63.13,10.69,-0.15,0.09,2.83,1.1,0,">1 nonsynonymous","A33L I104F N151T",3
"lib2","SARS-CoV-2","CAGTAATCACTGCTAT",5,104.1,10.68,-0.15,0.05,2.93,1.08,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CAGTAATCGATAACAA",12,37.66,8.23,-2.61,0.2,1.5,1.1,0.03,">1 nonsynonymous","I104N T201L",2
"lib2","SARS-CoV-2","CAGTAATGATATCAAT",11,180.12,10.32,-0.51,0.03,2.92,1.07,0,">1 nonsynonymous","C31F V32P",2
"lib2","SARS-CoV-2","CAGTAATGGAGTGTAA",2,8.67,8.48,-2.36,0.07,2.06,1,0,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","CAGTAATTAGAGCTAA",7,96.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R25V F126C G146C",3
"lib2","SARS-CoV-2","CAGTAATTTTCATAAA",6,157.34,10.36,-0.47,0.05,2.87,1.09,0,">1 nonsynonymous","N30C E141S",2
"lib2","SARS-CoV-2","CAGTACAAAAGTATAA",6,34588.18,10.26,-0.58,0.02,2.98,1.03,0,">1 nonsynonymous","K87N V173Y",2
"lib2","SARS-CoV-2","CAGTACAAATAAGGAG",8,52.44,6,-4.84,1.98,1.5,1.2,0.02,"1 nonsynonymous","V71G",1
"lib2","SARS-CoV-2","CAGTACAATTTGCCAC",3,31.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20S C31P E141R",3
"lib2","SARS-CoV-2","CAGTACACACGCGCAT",1,10.95,9.39,-1.44,0.27,1.66,1.01,0.01,">1 nonsynonymous","F12K R16L",2
"lib2","SARS-CoV-2","CAGTACACCAAATGAA",2,22.93,10.24,-0.6,0.11,2.8,1.2,0.01,"1 nonsynonymous","F126V",1
"lib2","SARS-CoV-2","CAGTACACCTTACCCT",5,8.05,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","F8C V77R S108H T140C",4
"lib2","SARS-CoV-2","CAGTACATAGCACACG",4,44.99,7.65,-3.19,0.18,1.97,1.12,0.01,">1 nonsynonymous","C6S R73M T85V I138C",4
"lib2","SARS-CoV-2","CAGTACCAAGACTTGC",2,41.72,10.52,-0.31,0.05,2.95,1.02,0,">1 nonsynonymous","E10V N120E",2
"lib2","SARS-CoV-2","CAGTACCACTGAACAG",11,131.29,10.1,-0.74,0.08,2.27,1.04,0,">1 nonsynonymous","P82I V173I",2
"lib2","SARS-CoV-2","CAGTACCACTGTGACT",3,128.86,10.16,-0.68,0.02,2.95,1.05,0,">1 nonsynonymous","I142P G196L T201G",3
"lib2","SARS-CoV-2","CAGTACCCGTACCGTT",2,22.06,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14Y P82R F99K",3
"lib2","SARS-CoV-2","CAGTACCGAGGAAAAG",3,19.78,10.65,-0.19,0.13,2.8,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAGTACCGATTGCTAT",2,8.69,6,-4.84,2,1.5,1.1,0.02,"1 nonsynonymous","F70N",1
"lib2","SARS-CoV-2","CAGTACCTGTGAATCG",3,23.65,6.45,-4.39,0.36,3,1.2,0.01,">1 nonsynonymous","A22P G51S G83P V173A",4
"lib2","SARS-CoV-2","CAGTACCTTATCCGTT",2,8.5,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R27E F44L Y50K T170M",4
"lib2","SARS-CoV-2","CAGTACGAACACTATC",4,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H R136C T148N",3
"lib2","SARS-CoV-2","CAGTACGCGAACAACG",6,52.54,10.76,-0.08,0.05,2.94,1.05,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","CAGTACGTATATGCCC",1,21.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R136F G174V H189L",3
"lib2","SARS-CoV-2","CAGTACTACAATACAG",9,9.32,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P7L R16V L95S E135R V173K",5
"lib2","SARS-CoV-2","CAGTACTACGAATGTT",2,34.18,10.79,-0.04,0.07,2.92,1.08,0,">1 nonsynonymous","A42M N64V",2
"lib2","SARS-CoV-2","CAGTACTACGATAACA",5,14.89,6.59,-4.24,0.77,1.5,1.25,0.05,">1 nonsynonymous","L38S G117S",2
"lib2","SARS-CoV-2","CAGTACTCAATGAACA",2,36.69,10.38,-0.46,0.04,2.92,1.05,0,">1 nonsynonymous","G9K N58T G83R",3
"lib2","SARS-CoV-2","CAGTACTCTTGCCCAG",1,34.85,10.71,-0.13,0.05,2.98,1.04,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CAGTACTGTATAACGG",6,115.14,10.86,0.03,0.05,2.96,1.04,0,">1 nonsynonymous","V37W L187E",2
"lib2","SARS-CoV-2","CAGTACTTAAAAGAGC",2,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67Y P96W Y121G",3
"lib2","SARS-CoV-2","CAGTACTTGTTAGTTA",3,4.43,NA,NA,NA,NA,NA,NA,"stop","N1T G51D N120* K132N C150R",5
"lib2","SARS-CoV-2","CAGTAGAAAAGCTGCA",3,54.05,10.01,-0.82,0.06,2.82,1.01,0,">1 nonsynonymous","A22L A67V",2
"lib2","SARS-CoV-2","CAGTAGAAGTTCAAAG",10,35.38,8.45,-2.38,0.17,1.5,1.09,0.01,">1 nonsynonymous","I2L K94A T100G",3
"lib2","SARS-CoV-2","CAGTAGACGAAGCGAG",5,43.94,7.15,-3.68,0.24,1.5,1.1,0.02,"1 nonsynonymous","S108L",1
"lib2","SARS-CoV-2","CAGTAGATTTGAGAAA",4,155.93,10.08,-0.75,0.04,2.35,1,0,">1 nonsynonymous","P82V A190T",2
"lib2","SARS-CoV-2","CAGTAGCAAACAACTT",2,0.18,NA,NA,NA,NA,NA,NA,"stop","E76D T201*",2
"lib2","SARS-CoV-2","CAGTAGCCAAATCAAA",4,6.93,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","I28T F44I P54L D137T",4
"lib2","SARS-CoV-2","CAGTAGCCAGAATGAG",3,59.49,10.39,-0.45,0.08,2.72,1.07,0,"1 nonsynonymous","P7V",1
"lib2","SARS-CoV-2","CAGTAGCCTATTTTCT",4,43.97,9.89,-0.95,0.07,2.19,1.03,0,">1 nonsynonymous","Y50I V115L",2
"lib2","SARS-CoV-2","CAGTAGCCTGATTTGC",2,107.05,10.75,-0.08,0.04,2.91,1.09,0,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","CAGTAGCGAAGGTTCA",3,40.37,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2H I104T G146N Q168K",4
"lib2","SARS-CoV-2","CAGTAGCTACACTAAA",5,51.22,6,-4.84,2,3,1.2,0,">1 nonsynonymous","G86K D98A G155P",3
"lib2","SARS-CoV-2","CAGTAGCTACTAACCA",12,13.75,7.38,-3.45,0.47,1.5,1.26,0.04,">1 nonsynonymous","G9P T15I V20M V103S S200Y",5
"lib2","SARS-CoV-2","CAGTAGCTTACCCCTA",12,5.26,NA,NA,NA,NA,NA,NA,"stop","A14G N120Y S129* E141C",4
"lib2","SARS-CoV-2","CAGTAGGCCGTGCCAT",10,204.2,10.7,-0.13,0.03,2.91,1.09,0,">1 nonsynonymous","P7T D59E",2
"lib2","SARS-CoV-2","CAGTAGTACACATACT",1,11.48,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","V11S T85I N130P Y159V",4
"lib2","SARS-CoV-2","CAGTAGTATGCTATAT",3,77.17,9.85,-0.98,0.1,2.43,1,0,">1 nonsynonymous","C6D A18S Y123M",3
"lib2","SARS-CoV-2","CAGTAGTATTGTTACA",2,37.09,10.42,-0.42,0.08,2.84,1,0,">1 nonsynonymous","T15Y K128S",2
"lib2","SARS-CoV-2","CAGTAGTCAACAAATG",7,32.24,6.2,-4.64,1.34,1.5,1.33,0.05,"1 nonsynonymous","R25F",1
"lib2","SARS-CoV-2","CAGTAGTCAGAGACCT",1,14.94,10.68,-0.15,0.08,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGTAGTCTGATAGGG",3,0.61,NA,NA,NA,NA,NA,NA,"stop","T3* K56R K128A L187T",4
"lib2","SARS-CoV-2","CAGTAGTGATTTAGGA",3,44.91,10.2,-0.64,0.11,2.42,1.02,0.01,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","CAGTATACAGTGACAA",2,62.77,10.32,-0.52,0.03,2.98,1.02,0,">1 nonsynonymous","R27S G174Q",2
"lib2","SARS-CoV-2","CAGTATACGCCTTATA",10,111.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V52I V77L D90H C158Y",4
"lib2","SARS-CoV-2","CAGTATACTGCTAGAC",10,100.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D34Y C49Q I138D Y175D",4
"lib2","SARS-CoV-2","CAGTATATAACAGTCC",2,89.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","K128L Y159L Q176R",3
"lib2","SARS-CoV-2","CAGTATATAGATTCAC",2,6.83,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","Y123W",1
"lib2","SARS-CoV-2","CAGTATATGGCTTCAC",2,15.74,9.64,-1.2,0.1,2.2,1.11,0.01,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","CAGTATCAAATTCAAC",2,26.9,6,-4.84,0.5,3,1.1,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","CAGTATCAGTCGAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12H L60R Y119G P149* G155F",5
"lib2","SARS-CoV-2","CAGTATCCTAATGCAA",3,82.77,10.76,-0.07,0.04,2.99,1.01,0,">1 nonsynonymous","L60Q G83F",2
"lib2","SARS-CoV-2","CAGTATCGTTATACAT",3,83.2,10.76,-0.08,0.03,2.97,1.05,0,">1 nonsynonymous","V32Y N110M",2
"lib2","SARS-CoV-2","CAGTATCTGGAAACAG",5,22.05,8.46,-2.38,0.23,1.75,1.23,0.01,">1 nonsynonymous","L57T G146N",2
"lib2","SARS-CoV-2","CAGTATCTTCCACAGA",25,2.64,NA,NA,NA,NA,NA,NA,"stop","F44P L57D D90* W106L Y119C K199N",6
"lib2","SARS-CoV-2","CAGTATGCTAAGACGT",5,59.17,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","Y91S Y175T",2
"lib2","SARS-CoV-2","CAGTATGGTATACTGC",2,11.68,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2V Q144L G174I",3
"lib2","SARS-CoV-2","CAGTATGTATAAACAT",8,70.94,10.67,-0.17,0.04,2.95,1,0,">1 nonsynonymous","Q84I V173F",2
"lib2","SARS-CoV-2","CAGTATGTTGTTACCG",9,51.17,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23R T63Y W106P G172S",4
"lib2","SARS-CoV-2","CAGTATTCCCGTAATT",3,1,NA,NA,NA,NA,NA,NA,"stop","F44R D98S D137* T201V",4
"lib2","SARS-CoV-2","CAGTATTGAAAAAACT",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F Y50V G83N S184V",4
"lib2","SARS-CoV-2","CAGTATTGACACATAC",2,18.44,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16M F99E N107V P161H P177R",5
"lib2","SARS-CoV-2","CAGTATTGTCAAACCG",10,215.16,10.82,-0.02,0.03,2.94,1.06,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","CAGTATTGTCCATTTC",5,85.48,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A89M Y123N V173G",3
"lib2","SARS-CoV-2","CAGTATTTTCCAGCTA",5,22.44,6.35,-4.49,0.9,1.5,1.16,0.07,">1 nonsynonymous","S41C V71S",2
"lib2","SARS-CoV-2","CAGTCAAAAGATGTTA",10,8.22,NA,NA,NA,NA,NA,NA,"stop","K114* E141F",2
"lib2","SARS-CoV-2","CAGTCAACATGTCGTA",8,76.96,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","G83P D112Q G172Q T201L",4
"lib2","SARS-CoV-2","CAGTCAAGAATATTCC",2,15.67,9.86,-0.97,0.2,1.82,1,0.01,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","CAGTCAAGCTTTATCC",1,27.92,10.92,0.09,0.07,3,1.01,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","CAGTCAAGGCCGGATA",2,26.64,9.76,-1.08,0.14,1.91,1,0.01,">1 nonsynonymous","L5K N40I L57V V153S",4
"lib2","SARS-CoV-2","CAGTCAAGTGTATTAG",2,11.33,10,-0.84,0.07,2.89,1.1,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","CAGTCAATGATTAACA",5,46.33,10.79,-0.04,0.06,2.93,1.09,0,">1 nonsynonymous","L5E N130L",2
"lib2","SARS-CoV-2","CAGTCAATTTTGAAAC",4,33.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86E I104K N118M G152S",4
"lib2","SARS-CoV-2","CAGTCACACATAGGTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143I",1
"lib2","SARS-CoV-2","CAGTCACCAAATGGAT",2,16.54,8.26,-2.58,0.16,2.17,1.15,0.01,">1 nonsynonymous","F62L S113I",2
"lib2","SARS-CoV-2","CAGTCACCTGAATCGC",13,2.09,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","CAGTCACGCGGGTGAG",4,44.42,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","N58T V77S G86R D98A",4
"lib2","SARS-CoV-2","CAGTCAGATGCAAAAA",3,27.44,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","L5Q Y91S A105K Q144V",4
"lib2","SARS-CoV-2","CAGTCAGTAAGGATAA",4,13.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12S T63M T148F N157V T201K",5
"lib2","SARS-CoV-2","CAGTCAGTCGTAAAAT",15,190.34,9.26,-1.57,0.04,2.89,1.08,0,">1 nonsynonymous","G9H Y119K I142Y G196K",4
"lib2","SARS-CoV-2","CAGTCATGCCAAATTG",9,143.66,8.93,-1.91,0.06,2.66,1.12,0,">1 nonsynonymous","S45G N64M Y119K G196R",4
"lib2","SARS-CoV-2","CAGTCATTTTTTTATG",2,36.33,9.83,-1,0.09,2.05,1.1,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","CAGTCCAAGAAGGTCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C Y21L K94T P161Y",4
"lib2","SARS-CoV-2","CAGTCCAATGAACTCA",3,53.98,10.78,-0.05,0.05,2.98,1.04,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","CAGTCCAATTAAACTC",4,39.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3R V37T P96L N107V L122T S129G F160C",7
"lib2","SARS-CoV-2","CAGTCCACCAGCGACT",7,101.04,10.24,-0.6,0.05,2.9,1.05,0,">1 nonsynonymous","C6S C31R S41I",3
"lib2","SARS-CoV-2","CAGTCCACCCCTATCC",5,74.31,8.8,-2.04,0.1,2.65,1.12,0,">1 nonsynonymous","K87V N107T S129L P197T",4
"lib2","SARS-CoV-2","CAGTCCACCTAGGTAG",9,90.33,7.55,-3.29,0.09,2.19,1.1,0,"1 nonsynonymous","C158T",1
"lib2","SARS-CoV-2","CAGTCCCACCTTGAGG",6,0.1,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","CAGTCCCGCCAAAAAA",2,65.75,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A67N V103Q N120I",3
"lib2","SARS-CoV-2","CAGTCCCTCAACCCAA",2,67.87,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33R F44Y N92Y",3
"lib2","SARS-CoV-2","CAGTCCGAACTATAAC",7,42.94,8.8,-2.04,0.04,2.91,1.11,0,">1 nonsynonymous","T15K A145Y",2
"lib2","SARS-CoV-2","CAGTCCTACATCTATT",6,80.41,9.62,-1.22,0.1,2.04,1.05,0,">1 nonsynonymous","D98T A105I",2
"lib2","SARS-CoV-2","CAGTCCTGAATCACGG",6,65.07,10.56,-0.28,0.05,2.98,1.03,0,">1 nonsynonymous","E10S D98E",2
"lib2","SARS-CoV-2","CAGTCCTGAGGGATGT",3,28.99,10.85,0.01,0.18,2.62,1,0.01,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","CAGTCCTTCAAGACAG",3,18.48,9.51,-1.33,0.13,2.04,1.1,0.01,">1 nonsynonymous","D34I C61M S129P",3
"lib2","SARS-CoV-2","CAGTCCTTCAAGTAAA",8,31.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9V S41M F70V D97S Q168L",5
"lib2","SARS-CoV-2","CAGTCGACCCCTATTA",13,258.92,10.85,0.01,0.06,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGTCGATAAACTGGT",1,0.08,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib2","SARS-CoV-2","CAGTCGATGATGGGTG",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q R25H F126R",3
"lib2","SARS-CoV-2","CAGTCGATTAACAGAA",5,54.14,10.12,-0.72,0.04,2.97,1,0,">1 nonsynonymous","T63R G152P",2
"lib2","SARS-CoV-2","CAGTCGCAGTGCTCCG",14,102.75,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L60Q F70C",2
"lib2","SARS-CoV-2","CAGTCGCTAACTACTT",12,124.77,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F12R G51V I72T K132I Q176C",5
"lib2","SARS-CoV-2","CAGTCGCTAATCCTCT",2,61.1,8.49,-2.34,0.12,2.73,1.07,0,">1 nonsynonymous","N64F N120P P169L T201G",4
"lib2","SARS-CoV-2","CAGTCGGTAACATTAT",3,54.09,10.81,-0.03,0.04,2.96,1,0,">1 nonsynonymous","I104A N130R",2
"lib2","SARS-CoV-2","CAGTCGTCTCGTACCA",13,48.45,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4G N13Q I28S Q144R",4
"lib2","SARS-CoV-2","CAGTCTCATTAAGGCT",5,32.01,7.73,-3.1,0.12,1.57,1.07,0,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","CAGTCTCTCCCCAGGC",2,10.36,9.89,-0.95,0.14,2.7,1.02,0.01,">1 nonsynonymous","K48S A81S F156L",3
"lib2","SARS-CoV-2","CAGTCTCTGAATATAG",6,47.47,6.89,-3.95,0.29,1.5,1.16,0.01,">1 nonsynonymous","G9L G83F A105N",3
"lib2","SARS-CoV-2","CAGTCTGACCTTTATG",3,42.44,10.9,0.06,0.05,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGTCTGATAGGTGTA",6,97.77,10.81,-0.02,0.02,2.94,1.07,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","CAGTCTGGGCCCTTAG",6,38.09,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","L122P Y165N",2
"lib2","SARS-CoV-2","CAGTCTGTCTTCACTG",6,131.78,10.18,-0.66,0.05,2.71,1.07,0,">1 nonsynonymous","P96S I138A",2
"lib2","SARS-CoV-2","CAGTCTTAGACGAATT",5,28.58,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5F G83P K87D K132M P161S",5
"lib2","SARS-CoV-2","CAGTGAAAAAGTTGTT",3,20.37,10.76,-0.07,0.08,2.86,1.16,0,"1 nonsynonymous","P54Y",1
"lib2","SARS-CoV-2","CAGTGAAAGGCGAATA",7,349.08,10.82,-0.02,0.04,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGTGAAATAAAACCC",4,71.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L60P K87A R136P G172S",4
"lib2","SARS-CoV-2","CAGTGAACTTATTAAC",8,132,9.55,-1.29,0.03,2.92,1.08,0,">1 nonsynonymous","N64R Y119S G166S",3
"lib2","SARS-CoV-2","CAGTGAATTCGGCCTT",2,76.94,10.66,-0.17,0.03,3,1.02,0,">1 nonsynonymous","I2N N24K D98Y",3
"lib2","SARS-CoV-2","CAGTGAATTTTAACGC",2,27.62,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C6N L95T N107L S184Y",4
"lib2","SARS-CoV-2","CAGTGACACAGTCGTC",11,109.67,6,-4.84,2,3,1.26,0,">1 nonsynonymous","Y91D I142A G166L G174V",4
"lib2","SARS-CoV-2","CAGTGACTGAAGGTTA",3,56.85,7.89,-2.95,0.16,1.5,1.08,0.01,">1 nonsynonymous","D98C P161Q",2
"lib2","SARS-CoV-2","CAGTGACTTAAGAGAT",3,68.53,9.36,-1.47,0.12,1.66,1.07,0.01,">1 nonsynonymous","N40F K56L Q144Y",3
"lib2","SARS-CoV-2","CAGTGATAGTTGCATA",9,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q S41Q Y91I",3
"lib2","SARS-CoV-2","CAGTGATATTCAACCT",3,47.36,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L57N V77E Q84W E135T",4
"lib2","SARS-CoV-2","CAGTGATTCACATCCT",1,48.68,9.86,-0.98,0.09,2.76,1.08,0,">1 nonsynonymous","K94S G166N",2
"lib2","SARS-CoV-2","CAGTGATTTCTGAATA",14,220.79,10.86,0.02,0.05,2.89,1.07,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","CAGTGATTTTAGCAAT",2,19.81,6.1,-4.74,1.6,1.5,1.18,0.04,">1 nonsynonymous","A14S V32Q L122W V180H",4
"lib2","SARS-CoV-2","CAGTGCAAATGTTCCA",2,13.94,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Q84W P96S V103F G117P",4
"lib2","SARS-CoV-2","CAGTGCAGTATCAACT",7,68.1,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V20L N40L",2
"lib2","SARS-CoV-2","CAGTGCCAAAGTCAGT",3,12.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K94M R179M",2
"lib2","SARS-CoV-2","CAGTGCCACTGAAGCG",3,68.7,7.54,-3.3,0.17,1.5,1.06,0.01,">1 nonsynonymous","A18R R27G T55K I138Q N171L",5
"lib2","SARS-CoV-2","CAGTGCCAGCTTGGAT",10,133.08,8.11,-2.72,0.1,1.72,1.12,0,">1 nonsynonymous","T85N S147I Q176R",3
"lib2","SARS-CoV-2","CAGTGCCCCAAATAAT",4,41.86,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","W106P E135L",2
"lib2","SARS-CoV-2","CAGTGCCGTTGTCATA",2,13.87,8.45,-2.38,0.39,1.5,1,0.06,">1 nonsynonymous","S41G S69K",2
"lib2","SARS-CoV-2","CAGTGCCTATAAATGA",1,23.34,8.59,-2.25,0.16,1.53,1.05,0.01,">1 nonsynonymous","V77Y G146S",2
"lib2","SARS-CoV-2","CAGTGCGATAATTAAA",7,53.44,7.96,-2.87,0.12,1.68,1.06,0.01,">1 nonsynonymous","G155Y Q176M",2
"lib2","SARS-CoV-2","CAGTGCGATAATTACG",2,16.66,9.33,-1.51,0.27,1.5,1.12,0.03,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","CAGTGCGCCAATTTTC",2,31.95,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L38T R124Y",2
"lib2","SARS-CoV-2","CAGTGCGGTACTAGTA",2,39.13,9.45,-1.39,0.09,1.98,1.08,0,">1 nonsynonymous","P7R E135T E141C",3
"lib2","SARS-CoV-2","CAGTGCGTTTGATACG",3,19.4,10.72,-0.12,0.09,2.88,1.1,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","CAGTGCTAATACACAG",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R K114V L122K",3
"lib2","SARS-CoV-2","CAGTGCTCAGGTTAGT",1,9.11,10.7,-0.13,0.12,2.94,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CAGTGGACAACCACAA",2,4.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","CAGTGGACATTAATTA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","P96F D137*",2
"lib2","SARS-CoV-2","CAGTGGACGAATCATG",1,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I Y91H",2
"lib2","SARS-CoV-2","CAGTGGATCCTATAAA",1,0.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","CAGTGGATCTCCCATG",2,6.28,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S45V D98G E141H N157K",4
"lib2","SARS-CoV-2","CAGTGGATTGACAAAA",3,0.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","CAGTGGCAAGCTTTAT",3,51.96,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D34R G86P Y123D P161W Y178F T201N",6
"lib2","SARS-CoV-2","CAGTGGCCCAAAGCTT",10,117.97,10.83,-0.01,0.05,2.94,1.04,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","CAGTGGCCTCGGTGGG",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S G101S N171H",3
"lib2","SARS-CoV-2","CAGTGGCTATTATTAA",9,151.81,8.11,-2.73,0.15,2.08,1.07,0.01,">1 nonsynonymous","K87D Y121A I138T",3
"lib2","SARS-CoV-2","CAGTGGTAGTTACTGA",6,32.94,8.64,-2.2,0.08,2.15,1.01,0,">1 nonsynonymous","T15Y S45G T85N G166S",4
"lib2","SARS-CoV-2","CAGTGGTCTGAAGTCC",8,104.21,10.83,-0.01,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGTGTAAAACACTCC",3,93.98,10.52,-0.31,0.05,2.9,1.03,0,">1 nonsynonymous","N24P P197M",2
"lib2","SARS-CoV-2","CAGTGTAGAATGACCG",3,88.93,10.77,-0.06,0.02,2.96,1.05,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","CAGTGTCTCATCCACT",3,46.02,7.56,-3.27,0.33,1.5,1.09,0.03,">1 nonsynonymous","F12S D34G S41L F156T",4
"lib2","SARS-CoV-2","CAGTGTGGTTTTACGA",6,34.34,10.81,-0.03,0.04,2.99,1.02,0,">1 nonsynonymous","P54A E141V T201V",3
"lib2","SARS-CoV-2","CAGTGTTATAAAAAAA",1,20.24,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","Y35M Y119V S129G N157F",4
"lib2","SARS-CoV-2","CAGTGTTGGACAATTC",4,125.07,10,-0.84,0.06,2.34,1,0,">1 nonsynonymous","L5M A89G",2
"lib2","SARS-CoV-2","CAGTGTTTGCTATAAC",2,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M L122G P149K Q168P",4
"lib2","SARS-CoV-2","CAGTTAAAATATTGTT",10,89.19,8.83,-2.01,0.17,1.5,1.11,0.01,">1 nonsynonymous","V77E K114N",2
"lib2","SARS-CoV-2","CAGTTAAAATGTACAA",2,9.31,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I80K Q84K N120I T201V",4
"lib2","SARS-CoV-2","CAGTTAACAACCAAAG",6,1.47,NA,NA,NA,NA,NA,NA,"stop","V20P S41C V52F K56L N130*",5
"lib2","SARS-CoV-2","CAGTTAACACCTTCAA",6,77.52,10.14,-0.7,0.11,2.46,1.08,0.01,"1 nonsynonymous","R136F",1
"lib2","SARS-CoV-2","CAGTTAACACGAGCGA",5,34.28,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","Y35R K56W Y93H N151Q",4
"lib2","SARS-CoV-2","CAGTTAACCGCAATAA",3,64.59,8.33,-2.51,0.26,1.5,1.06,0.03,">1 nonsynonymous","D90V N107C",2
"lib2","SARS-CoV-2","CAGTTAAGCCGACCAC",1,32.07,9.71,-1.12,0.2,2.64,1,0.02,">1 nonsynonymous","S19M K114T",2
"lib2","SARS-CoV-2","CAGTTAATCAACAATG",4,32.45,10.67,-0.17,0.07,2.96,1.03,0,">1 nonsynonymous","N40S K87T",2
"lib2","SARS-CoV-2","CAGTTAATCCCCAAGG",5,0.31,NA,NA,NA,NA,NA,NA,"stop","V32* S36M",2
"lib2","SARS-CoV-2","CAGTTACAATGATCAA",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103M G117V",2
"lib2","SARS-CoV-2","CAGTTACAGGTATTAG",5,22.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42S C61A V77H I104M F134W P161L A192I S200A",8
"lib2","SARS-CoV-2","CAGTTACGAACAGTGG",14,159.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R27Q K87R N107T Y119M Y165L",5
"lib2","SARS-CoV-2","CAGTTACGGGTTGAAC",6,17.55,7.67,-3.17,0.33,1.5,1.06,0.04,">1 nonsynonymous","N64S F99C K198S",3
"lib2","SARS-CoV-2","CAGTTACGTTATAGTA",4,72.72,9.58,-1.26,0.1,2.39,1.06,0,">1 nonsynonymous","T46N G152W",2
"lib2","SARS-CoV-2","CAGTTAGATACTCACC",1,0.24,NA,NA,NA,NA,NA,NA,"stop","F8Y T201*",2
"lib2","SARS-CoV-2","CAGTTAGATAGTATAG",8,157.25,10.57,-0.27,0.04,2.91,1.08,0,">1 nonsynonymous","D97K S139R",2
"lib2","SARS-CoV-2","CAGTTAGTAAGCTTAA",6,48.74,9.59,-1.25,0.09,1.99,1.05,0,">1 nonsynonymous","D34R D98V",2
"lib2","SARS-CoV-2","CAGTTATAATTCTCCT",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I V77G T100N S129F",4
"lib2","SARS-CoV-2","CAGTTATATTCAGCTA",9,67.41,10.74,-0.09,0.03,2.94,1.07,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","CAGTTATCGACATAAA",2,73.5,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S45L D98T N120W Q176G",4
"lib2","SARS-CoV-2","CAGTTATGTGTATTAT",1,8.2,7.33,-3.51,1.02,2.76,1.19,0.01,">1 nonsynonymous","K26G V71M G83H W106A F126G",5
"lib2","SARS-CoV-2","CAGTTATTTATTTAAG",3,101.41,10.8,-0.03,0.06,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","CAGTTCAAACCATAAA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","F17D P54W N64L N110W Y121* G155P",6
"lib2","SARS-CoV-2","CAGTTCAAGTAATGCT",3,71.3,10.87,0.03,0.05,2.9,1.11,0,"1 nonsynonymous","R16V",1
"lib2","SARS-CoV-2","CAGTTCACTATTTGCT",7,69.81,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35F I88M W106E T140G",4
"lib2","SARS-CoV-2","CAGTTCAGACTACAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","W23V Q168*",2
"lib2","SARS-CoV-2","CAGTTCATACATAGCC",1,19.16,10.1,-0.74,0.16,2.56,1.07,0.01,">1 nonsynonymous","G9F Y66K L122N",3
"lib2","SARS-CoV-2","CAGTTCATAGGAAAAA",9,88.73,8.85,-1.98,0.07,1.9,1.12,0,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","CAGTTCATCAATATAC",4,238.17,10.58,-0.26,0.04,2.94,1.02,0,">1 nonsynonymous","Q144M V153Y K198S",3
"lib2","SARS-CoV-2","CAGTTCATGAACAAAA",1,75.34,10.85,0.01,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGTTCCAGAGGCCTG",1,9.27,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G86C I142G",2
"lib2","SARS-CoV-2","CAGTTCCCAATCAACA",1,71.65,10.08,-0.76,0.04,2.9,1.04,0,">1 nonsynonymous","G9L T63R F156I",3
"lib2","SARS-CoV-2","CAGTTCCTAAGAGAAC",5,86.6,10.87,0.03,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CAGTTCCTGATGCTTA",3,68.93,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y91A N157L G166M",3
"lib2","SARS-CoV-2","CAGTTCGCTAAGAATT",13,165.95,9.39,-1.45,0.04,2.91,1.05,0,">1 nonsynonymous","D90N Q168V",2
"lib2","SARS-CoV-2","CAGTTCTATAATCTCC",5,0.05,NA,NA,NA,NA,NA,NA,"stop","S41T C49* V52L K114M",4
"lib2","SARS-CoV-2","CAGTTCTATATTGATA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","L60Q C150*",2
"lib2","SARS-CoV-2","CAGTTCTCTACTCGTA",1,59.66,8.95,-1.89,0.1,2.04,1.08,0.01,">1 nonsynonymous","D98N E141F P177S",3
"lib2","SARS-CoV-2","CAGTTCTCTCCAAGGT",1,53.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q176S R179S",2
"lib2","SARS-CoV-2","CAGTTCTTACTCGCAA",8,117.5,10.78,-0.06,0.03,2.92,1.08,0,">1 nonsynonymous","L5E I138S",2
"lib2","SARS-CoV-2","CAGTTCTTATATTAAC",6,28.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F R124A V173L",3
"lib2","SARS-CoV-2","CAGTTGAAATTACAAT",6,38.25,10.1,-0.74,0.04,2.67,1,0,">1 nonsynonymous","P7S T15V Y35R",3
"lib2","SARS-CoV-2","CAGTTGAATATTTGCC",17,182.48,10.73,-0.11,0.05,2.95,1.05,0,">1 nonsynonymous","L122M P149I",2
"lib2","SARS-CoV-2","CAGTTGACGCTAAAAC",8,48.67,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","W23M S69G V103I Q168K K198T",5
"lib2","SARS-CoV-2","CAGTTGAGACACCATT",1,0.13,NA,NA,NA,NA,NA,NA,"stop","Y39* G51C D97S T100D Q144K G174W",6
"lib2","SARS-CoV-2","CAGTTGATAACAAAAT",4,41.05,9.1,-1.73,0.29,1.73,1.3,0.02,">1 nonsynonymous","L60R L122C S139F",3
"lib2","SARS-CoV-2","CAGTTGATAACTTGCA",4,62.25,10.79,-0.04,0.06,2.88,1.13,0,"1 nonsynonymous","C195A",1
"lib2","SARS-CoV-2","CAGTTGATAAGCGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F17R Q84Y I138N Y175D K199*",5
"lib2","SARS-CoV-2","CAGTTGATTATACCTA",4,0,NA,NA,NA,NA,NA,NA,"stop","N13F S41* T201S",3
"lib2","SARS-CoV-2","CAGTTGCAAGGGTAAA",7,171.34,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61F G172R Y178S",3
"lib2","SARS-CoV-2","CAGTTGCACAATATGC",10,90.77,7.91,-2.92,0.27,1.5,1.05,0.03,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","CAGTTGCACGCGCGAG",2,13.21,10.97,0.13,0.08,3,1.02,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","CAGTTGGACGTTATCT",13,64.12,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I88K S113E L162K",3
"lib2","SARS-CoV-2","CAGTTGTATCGACTTG",2,10.04,NA,NA,NA,NA,NA,NA,"stop","A67S Y93* I104V V181*",4
"lib2","SARS-CoV-2","CAGTTGTCCAGTTCAT",2,15.49,9.88,-0.95,0.08,2.12,1,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","CAGTTTAAACCCGTAA",11,166.5,10.27,-0.57,0.07,2.66,1.01,0,"1 nonsynonymous","Y21A",1
"lib2","SARS-CoV-2","CAGTTTAACTAGGTCA",6,98.5,7.14,-3.7,0.11,1.86,1.12,0,">1 nonsynonymous","S113I T170M",2
"lib2","SARS-CoV-2","CAGTTTACACTAAGCT",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K S139V",2
"lib2","SARS-CoV-2","CAGTTTACATATTGAT",2,130.17,9.83,-1,0.06,2.79,1.09,0,">1 nonsynonymous","C6N V37I S43C",3
"lib2","SARS-CoV-2","CAGTTTAGAACATCGA",5,1.8,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib2","SARS-CoV-2","CAGTTTAGGTGCTGTT",4,13.14,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","P54L P82A F99R",3
"lib2","SARS-CoV-2","CAGTTTAGTACGTTAT",5,23.91,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A14C A22T F47V F99I S147R",5
"lib2","SARS-CoV-2","CAGTTTATCGACCCCC",1,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R S29T D68H W106S T148S",5
"lib2","SARS-CoV-2","CAGTTTATCTAGTTTA",2,14.68,8.83,-2.01,0.25,1.81,1.11,0.03,">1 nonsynonymous","G86S N130Y",2
"lib2","SARS-CoV-2","CAGTTTATGTGGTCAG",5,31.04,7.85,-2.99,0.15,1.78,1.06,0.01,">1 nonsynonymous","F44N A105V G155C",3
"lib2","SARS-CoV-2","CAGTTTCAGGAAAACC",8,0.7,NA,NA,NA,NA,NA,NA,"stop","K128* I142G",2
"lib2","SARS-CoV-2","CAGTTTCAGGGTTAAA",8,108.56,10.48,-0.36,0.04,2.92,1.04,0,">1 nonsynonymous","R27T A33V F62G",3
"lib2","SARS-CoV-2","CAGTTTCAGTTTTGTT",9,80.66,9.16,-1.68,0.09,2.74,1.1,0,">1 nonsynonymous","A14N Y119S",2
"lib2","SARS-CoV-2","CAGTTTCATGAGAGGG",7,133.74,8.42,-2.41,0.1,2.99,1.08,0,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","CAGTTTCCAATACCTG",1,10.1,9.89,-0.95,0.12,2.85,1.04,0.01,">1 nonsynonymous","A42L R127A",2
"lib2","SARS-CoV-2","CAGTTTCCCTTACCGG",1,31.41,9.39,-1.44,0.12,2,1.1,0.01,">1 nonsynonymous","G83I E141R",2
"lib2","SARS-CoV-2","CAGTTTCTCGAAATGG",4,56.59,7.85,-2.99,0.11,2.36,1.11,0,">1 nonsynonymous","S29T E141A Y175S S184M",4
"lib2","SARS-CoV-2","CAGTTTGCCATATCAA",3,82.99,10.68,-0.16,0.05,2.94,1.03,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","CAGTTTGTATTAAGAA",12,195.69,10.19,-0.65,0.08,2.61,1,0,">1 nonsynonymous","R27V P96Q",2
"lib2","SARS-CoV-2","CAGTTTGTGCACAAAG",5,37.71,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","N58F T140N Y165C",3
"lib2","SARS-CoV-2","CAGTTTGTGCTGCAGC",10,293.97,10.07,-0.77,0.06,2.53,1.05,0,">1 nonsynonymous","Y123T I138M",2
"lib2","SARS-CoV-2","CAGTTTTATTCGTAGA",1,1.79,NA,NA,NA,NA,NA,NA,"stop","F8V N64K L122* R179G",4
"lib2","SARS-CoV-2","CAGTTTTGGCTCCTTG",8,1.63,NA,NA,NA,NA,NA,NA,"stop","F12G V77R P96G A105* G155A L162Q Q168A V181R K199T",9
"lib2","SARS-CoV-2","CAGTTTTTACTTAATA",6,101.74,10.68,-0.16,0.04,2.9,1.08,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","CAGTTTTTCAAATAGA",10,96.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N58S A105F Y123E",3
"lib2","SARS-CoV-2","CAGTTTTTCTAGCAAT",1,10.53,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9V G83I Q176R",3
"lib2","SARS-CoV-2","CAGTTTTTCTATTATT",10,47.76,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","L5Q F12I L95S S113T F167T",5
"lib2","SARS-CoV-2","CATAAAAAACCAAACA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E A67R N157A T201R",4
"lib2","SARS-CoV-2","CATAAAAACCGTAACT",3,9.96,9.59,-1.24,0.21,1.87,1.02,0.03,">1 nonsynonymous","D90G L183V",2
"lib2","SARS-CoV-2","CATAAAAACTACAATT",1,8.84,10.68,-0.16,0.17,3,1.02,0.01,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","CATAAAAAGAAAAAAA",30,94.67,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I104S R127T",2
"lib2","SARS-CoV-2","CATAAAAAGACGACAC",5,36.47,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","C61P Y93T",2
"lib2","SARS-CoV-2","CATAAAAAGCCATATA",2,2.05,NA,NA,NA,NA,NA,NA,"stop","Y50* N130I",2
"lib2","SARS-CoV-2","CATAAAAATAAGAGAA",1,4.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34Y",1
"lib2","SARS-CoV-2","CATAAAAATAGAAAGC",5,11.21,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","I72K E154L",2
"lib2","SARS-CoV-2","CATAAAAATCACACAA",5,30.01,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G146L G166L",2
"lib2","SARS-CoV-2","CATAAAACAAAAAACA",8,44.76,8.48,-2.36,0.25,1.5,1.04,0.03,">1 nonsynonymous","P7L L162W",2
"lib2","SARS-CoV-2","CATAAAACACATAGAT",2,20.47,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","C6R N107R T201Y",3
"lib2","SARS-CoV-2","CATAAAACACGGTAAT",4,18.5,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","K56Q R73M T85W D112L F167K A190L",6
"lib2","SARS-CoV-2","CATAAAACACTATAAC",5,11.13,6,-4.84,1.14,3,1.29,0.02,">1 nonsynonymous","F8T Q84R D90E P96R V103N I142L Y159C",7
"lib2","SARS-CoV-2","CATAAAACACTTGACA",7,63.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N24S I80E K87T Y119K T201W",5
"lib2","SARS-CoV-2","CATAAAACATGATCGT",6,5.79,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","L131W E186L",2
"lib2","SARS-CoV-2","CATAAAACCAATGGAC",2,9.04,10.88,0.04,0.07,2.95,1.05,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","CATAAAACCCCTCAAC",14,86.05,10.05,-0.78,0.08,2.34,1.04,0,">1 nonsynonymous","D98L K128C K132E T201W",4
"lib2","SARS-CoV-2","CATAAAACGCTAACAT",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W F99L N107S",3
"lib2","SARS-CoV-2","CATAAAAGGGTAAGCA",12,130.26,10.72,-0.12,0.03,2.92,1.05,0,"1 nonsynonymous","T140G",1
"lib2","SARS-CoV-2","CATAAAATAAAAAAAT",2,48.06,10.2,-0.63,0.07,2.86,1.13,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","CATAAAATACCGGTGG",1,0.83,NA,NA,NA,NA,NA,NA,"stop","N40S I72* P149H L183N",4
"lib2","SARS-CoV-2","CATAAAATATGTACGA",1,19.43,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","R73L P82W I88N Y143W",4
"lib2","SARS-CoV-2","CATAAAATGTACCAGG",3,20.22,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L57A Y143P",2
"lib2","SARS-CoV-2","CATAAAATTAACCTGG",14,46.06,8.63,-2.21,0.14,1.83,1.07,0.01,">1 nonsynonymous","F47R G152P",2
"lib2","SARS-CoV-2","CATAAAATTATAGATG",4,50.58,10.24,-0.59,0.03,2.95,1.05,0,">1 nonsynonymous","K26I Y35M F156R",3
"lib2","SARS-CoV-2","CATAAAATTATGTCCG",3,7.96,8.94,-1.89,0.33,1.51,1,0.02,">1 nonsynonymous","F12S Q144K",2
"lib2","SARS-CoV-2","CATAAAATTATTGATG",8,36.39,10.28,-0.56,0.05,2.99,1.04,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","CATAAACAAATACGTA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P C49L T201R",3
"lib2","SARS-CoV-2","CATAAACAAATCAAAA",2,11.93,7.89,-2.94,0.29,1.88,1.05,0.03,">1 nonsynonymous","R127C F156L",2
"lib2","SARS-CoV-2","CATAAACAATAATATG",3,88.38,10.63,-0.21,0.05,2.88,1.08,0,">1 nonsynonymous","A18S T100K A105S",3
"lib2","SARS-CoV-2","CATAAACAATACCCGC",7,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y I80L L122S Q144S P161S",5
"lib2","SARS-CoV-2","CATAAACAATTAATAG",14,3.99,NA,NA,NA,NA,NA,NA,"stop","C49W Q176*",2
"lib2","SARS-CoV-2","CATAAACACTTGATAG",5,66.02,10.49,-0.34,0.07,2.92,1.08,0,">1 nonsynonymous","K87A T201V",2
"lib2","SARS-CoV-2","CATAAACATCGGCCAG",2,8.76,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V37S R73P W106R",3
"lib2","SARS-CoV-2","CATAAACATGAGTGTA",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","CATAAACATGTTCGAA",4,40.55,9.25,-1.59,0.14,1.5,1.08,0.01,">1 nonsynonymous","P82I D90S",2
"lib2","SARS-CoV-2","CATAAACCATATATCT",5,54.64,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V20A Y35C G86V I104M G117K S139F G196I",7
"lib2","SARS-CoV-2","CATAAACCGCGATGAA",1,5.98,8.74,-2.09,0.34,2.26,1,0.04,">1 nonsynonymous","S41L L60P D97T G116N Q163R",5
"lib2","SARS-CoV-2","CATAAACGAATTACGT",2,13.72,8.71,-2.12,0.29,1.5,1.02,0.04,">1 nonsynonymous","W106G T140R",2
"lib2","SARS-CoV-2","CATAAACGCAAGATGG",3,13.93,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y50L C61I K94T D98T K198R",5
"lib2","SARS-CoV-2","CATAAACGTAACCCAA",1,18.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D59L V77W",2
"lib2","SARS-CoV-2","CATAAACTCACCCTGA",10,83.87,9.79,-1.04,0.08,2.03,1.11,0,">1 nonsynonymous","T63S D97V A105I",3
"lib2","SARS-CoV-2","CATAAACTCAGCAAAG",3,67.29,9.25,-1.59,0.11,1.83,1.08,0.01,">1 nonsynonymous","L111D N120L I138W",3
"lib2","SARS-CoV-2","CATAAACTCGACCTTG",2,5.05,6.25,-4.58,1.68,3,1.15,0.02,">1 nonsynonymous","R25L E141D G155F",3
"lib2","SARS-CoV-2","CATAAACTGCAAATGA",6,242.32,10.82,-0.01,0.05,2.96,1.05,0,"1 nonsynonymous","N110T",1
"lib2","SARS-CoV-2","CATAAACTGTTGTGGC",5,60.09,10.73,-0.1,0.02,3,1,0,">1 nonsynonymous","C61D T201A",2
"lib2","SARS-CoV-2","CATAAACTTGTTGGAG",7,3.97,NA,NA,NA,NA,NA,NA,"stop","A105S E154*",2
"lib2","SARS-CoV-2","CATAAAGAAAGACACA",12,391.51,9.63,-1.21,0.02,2.93,1.06,0,">1 nonsynonymous","N4Q T55H K114P",3
"lib2","SARS-CoV-2","CATAAAGAACTTACCG",7,45.27,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V11D I88T W106K S113L N157G",5
"lib2","SARS-CoV-2","CATAAAGAGCTAAAAG",5,61.26,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","P82N F99R Y143L",3
"lib2","SARS-CoV-2","CATAAAGAGGAGTAAT",4,36.15,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L5A T55A D112K Y123R L162W",5
"lib2","SARS-CoV-2","CATAAAGCACAACCCG",9,37.23,9.23,-1.6,0.1,2.55,1.03,0,">1 nonsynonymous","P54V C61A G146F",3
"lib2","SARS-CoV-2","CATAAAGCACGATCCA",8,84.06,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F8M N40K C61R Y93Q Q176M",5
"lib2","SARS-CoV-2","CATAAAGCATGAGAAT",13,149.04,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","L131W Q144D E154Y V173M",4
"lib2","SARS-CoV-2","CATAAAGCCAGGGTAC",8,41.05,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","I80K G83W",2
"lib2","SARS-CoV-2","CATAAAGCCAGGTAAG",6,56.35,10.79,-0.05,0.05,2.91,1.1,0,"1 nonsynonymous","K48V",1
"lib2","SARS-CoV-2","CATAAAGCGATTTGCA",11,3.96,NA,NA,NA,NA,NA,NA,"stop","C6S V37R F47L F99G W106G N120* P161R",7
"lib2","SARS-CoV-2","CATAAAGCTAACTTTG",3,1.17,NA,NA,NA,NA,NA,NA,"stop","K87* N107L",2
"lib2","SARS-CoV-2","CATAAAGGAATACCAA",8,45.34,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P54R G83I A89L",3
"lib2","SARS-CoV-2","CATAAAGGAATACCTG",6,18.2,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3C G51S P96R W106R",4
"lib2","SARS-CoV-2","CATAAAGGCTACAACT",19,6.65,NA,NA,NA,NA,NA,NA,"stop","E10L S45* L60Q K94E Y121I T201I",6
"lib2","SARS-CoV-2","CATAAAGGGGTGGTTA",4,12.1,7.06,-3.78,0.38,1.5,1.04,0.03,">1 nonsynonymous","A14I K94V",2
"lib2","SARS-CoV-2","CATAAAGGTAACTATG",7,7.42,7.35,-3.48,0.28,2.86,1.09,0.01,">1 nonsynonymous","A33M G83E K94C Y121R",4
"lib2","SARS-CoV-2","CATAAAGTAGCGATAA",7,99.47,10.75,-0.09,0.03,2.93,1.08,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","CATAAATAAAATGCAC",2,2.92,NA,NA,NA,NA,NA,NA,"stop","F99L S113T R136T G146L F160*",5
"lib2","SARS-CoV-2","CATAAATAAACAAATC",5,60.38,9.93,-0.91,0.1,2.04,1.09,0,">1 nonsynonymous","C61L T100D",2
"lib2","SARS-CoV-2","CATAAATAGAGGAATT",2,33.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A89K R136S",2
"lib2","SARS-CoV-2","CATAAATATAAACAAA",5,16.24,6.91,-3.93,0.38,1.5,1.25,0.03,">1 nonsynonymous","R25F S41F T100V K114Q",4
"lib2","SARS-CoV-2","CATAAATATGAGATTT",8,146.51,10.68,-0.16,0.02,3,1.02,0,">1 nonsynonymous","S41R T148Q",2
"lib2","SARS-CoV-2","CATAAATATTATAAAA",11,0.68,NA,NA,NA,NA,NA,NA,"stop","L57* V77I G83W Y121R",4
"lib2","SARS-CoV-2","CATAAATGAACCCTTA",2,70.61,10.02,-0.81,0.05,2.73,1.03,0,">1 nonsynonymous","R16E V37N Y91A L111Q",4
"lib2","SARS-CoV-2","CATAAATTAAACTATG",4,78.27,10.66,-0.17,0.05,2.93,1.05,0,">1 nonsynonymous","C61T T100L F134N",3
"lib2","SARS-CoV-2","CATAAATTATAGCATA",11,139.69,10.8,-0.03,0.03,2.99,1.03,0,"1 nonsynonymous","N110M",1
"lib2","SARS-CoV-2","CATAAATTATCCTCCA",5,55.52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L57H P82D N107Y",3
"lib2","SARS-CoV-2","CATAAATTTTCTTTTT",1,11.3,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1D C61H F99S L131K",4
"lib2","SARS-CoV-2","CATAACAAAAATTAGG",7,13.34,10.83,0,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACAAATGGGTTC",15,174,10.79,-0.04,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACAAGACCCCAG",4,52.58,10.63,-0.21,0.04,2.94,1.06,0,">1 nonsynonymous","A33C T63Y",2
"lib2","SARS-CoV-2","CATAACAATAACCCTT",4,45.19,6.91,-3.92,0.24,1.67,1.2,0.01,">1 nonsynonymous","G9V D68T E141L",3
"lib2","SARS-CoV-2","CATAACAATACCTCAG",4,36.63,8.89,-1.95,0.28,1.5,1.09,0.03,">1 nonsynonymous","F99V I142Y",2
"lib2","SARS-CoV-2","CATAACACAAAGCCTG",3,86.66,10.88,0.05,0.05,2.89,1.11,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","CATAACACCCGGAGGT",7,62.86,10.79,-0.05,0.07,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACACTTGTGAGG",3,47.08,9.95,-0.89,0.13,2.12,1.04,0.01,">1 nonsynonymous","D34W I104G L122K S129T",4
"lib2","SARS-CoV-2","CATAACAGATAATAAA",2,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M A14R V103E G116K",4
"lib2","SARS-CoV-2","CATAACAGGATTTAAT",5,8.81,6.6,-4.24,0.36,1.5,1.09,0.01,">1 nonsynonymous","L5I E10F N30A W106S E186F",5
"lib2","SARS-CoV-2","CATAACAGTAAATAAC",3,69.62,10.69,-0.15,0.04,2.99,1.03,0,">1 nonsynonymous","D59T D90S S129Q",3
"lib2","SARS-CoV-2","CATAACATAACTGGAC",2,4.65,NA,NA,NA,NA,NA,NA,"stop","C6* Y35H G86F Y175L",4
"lib2","SARS-CoV-2","CATAACATACGCAGCC",11,257.92,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V32N V37S K94E Q176S F185L T201H",6
"lib2","SARS-CoV-2","CATAACCACAATACAT",1,12.06,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","C150W V182F T201C",3
"lib2","SARS-CoV-2","CATAACCACAGACGCT",8,207.34,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14G Y35C V77Q P82M P177A",5
"lib2","SARS-CoV-2","CATAACCACGCAATCA",3,33.79,10.73,-0.1,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACCAGGCATAAT",2,63.16,10.5,-0.34,0.03,2.98,1.01,0,">1 nonsynonymous","N30K P191T T201N",3
"lib2","SARS-CoV-2","CATAACCCACATAAAA",5,46.06,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4K R27E D34R S41E G51L T201M",6
"lib2","SARS-CoV-2","CATAACCCACCTCAAT",5,101.79,10.18,-0.66,0.09,2.41,1.02,0,">1 nonsynonymous","V52A K128F",2
"lib2","SARS-CoV-2","CATAACCCGAGGGCTA",4,36.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","CATAACCCGGGTTGAA",9,102.09,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y93G P149F R179Y",3
"lib2","SARS-CoV-2","CATAACCCTTAAAGGC",3,15.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F17E C49V Y143E",3
"lib2","SARS-CoV-2","CATAACCCTTACGGCA",6,28.54,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G51W G101D Q163K G174V",4
"lib2","SARS-CoV-2","CATAACCGAGTTGTAT",2,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113L L122H R136W N157M",4
"lib2","SARS-CoV-2","CATAACCGCCAACGCA",4,24.01,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A42T L60R G86L L183W",4
"lib2","SARS-CoV-2","CATAACCGCGCAGGAA",2,24.89,10.74,-0.09,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACCTTAGCCACC",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T G83D V103K Y165Q T201I",5
"lib2","SARS-CoV-2","CATAACGAACGAAATG",5,51.77,9.79,-1.04,0.08,2.77,1.07,0,">1 nonsynonymous","G116F E141F",2
"lib2","SARS-CoV-2","CATAACGACAATAGGG",2,34.17,6.59,-4.25,0.37,1.5,1.13,0.02,">1 nonsynonymous","V11P K94R D112L",3
"lib2","SARS-CoV-2","CATAACGACTCTAAGG",8,89.25,10.72,-0.12,0.04,2.99,1,0,"1 nonsynonymous","K114C",1
"lib2","SARS-CoV-2","CATAACGATATAGCGG",6,36.13,10.37,-0.46,0.06,2.89,1,0,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","CATAACGCCAATTACA",3,16.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2N R25V N58Y L95C D137G",5
"lib2","SARS-CoV-2","CATAACGCTGTCTTCT",5,1.59,NA,NA,NA,NA,NA,NA,"stop","K87V K94N K114R S139*",4
"lib2","SARS-CoV-2","CATAACGTAAACGCCA",6,143.75,10.74,-0.1,0.04,3,1.02,0,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","CATAACGTACTTGGGA",2,7.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N13S C61T L162Q V173T V181L",5
"lib2","SARS-CoV-2","CATAACGTAGAGTATC",6,34.7,6,-4.84,0.66,1.5,1.07,0,">1 nonsynonymous","F12N N40S C61Y I138K F156M",5
"lib2","SARS-CoV-2","CATAACGTATGCAACA",7,0.81,NA,NA,NA,NA,NA,NA,"stop","D68L D98*",2
"lib2","SARS-CoV-2","CATAACTAAAACCTCT",3,9.17,NA,NA,NA,NA,NA,NA,"stop","C61* D137G Y143K P149W",4
"lib2","SARS-CoV-2","CATAACTAACCCGACG",5,87.54,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S113T F167V P197E",3
"lib2","SARS-CoV-2","CATAACTAACCGTTTC",4,75.22,10.98,0.15,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAACTAGATACTTA",2,11.88,10.24,-0.59,0.06,2.89,1.05,0,">1 nonsynonymous","T15G C61E",2
"lib2","SARS-CoV-2","CATAACTATCGCTACC",3,14.55,6.11,-4.72,1.7,1.5,1.24,0.03,">1 nonsynonymous","T63D S108P G172A K198Q",4
"lib2","SARS-CoV-2","CATAACTCACTGCAAG",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144Y",1
"lib2","SARS-CoV-2","CATAACTCTATTTCGC",2,24.81,10.05,-0.79,0.09,2.68,1.09,0,">1 nonsynonymous","S43Y L57H",2
"lib2","SARS-CoV-2","CATAACTCTGGATACG",7,25.31,8.74,-2.09,0.3,2.04,1.12,0.05,">1 nonsynonymous","D34T T100I L111T",3
"lib2","SARS-CoV-2","CATAACTGGCCCTAGT",1,51.63,9.3,-1.54,0.08,2.89,1.1,0,">1 nonsynonymous","P7N E141G G166I",3
"lib2","SARS-CoV-2","CATAACTGTCGACGTG",1,22.49,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","V11C D112T",2
"lib2","SARS-CoV-2","CATAAGAAAATAGGAC",13,289.17,10.75,-0.09,0.04,2.91,1.09,0,"1 nonsynonymous","G116E",1
"lib2","SARS-CoV-2","CATAAGAAACCTGGTA",4,60.91,7.74,-3.1,0.29,1.5,1.16,0.02,">1 nonsynonymous","F44I P177C",2
"lib2","SARS-CoV-2","CATAAGAAATTATAGG",5,0,NA,NA,NA,NA,NA,NA,"stop","C31* A42P G86D",3
"lib2","SARS-CoV-2","CATAAGACAAGCTTCT",5,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F L183T",2
"lib2","SARS-CoV-2","CATAAGACATAATTCT",5,0.07,NA,NA,NA,NA,NA,NA,"stop","C6L I88*",2
"lib2","SARS-CoV-2","CATAAGACATCTATCA",6,12.81,9.24,-1.59,0.16,1.85,1.03,0.01,">1 nonsynonymous","L5K F12Q",2
"lib2","SARS-CoV-2","CATAAGACCTTCCCGA",1,49.39,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","CATAAGACGCAAGGAT",2,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139R T148I G152S P161Y",4
"lib2","SARS-CoV-2","CATAAGACTAAAGCGT",4,75.37,10.03,-0.81,0.07,2.71,1.02,0,">1 nonsynonymous","A14D N120L",2
"lib2","SARS-CoV-2","CATAAGAGATTTAGTC",1,6.32,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N92M K114R E141Q C158M",4
"lib2","SARS-CoV-2","CATAAGAGCAAAAACG",2,7.36,8.34,-2.49,0.39,1.5,1.19,0.06,"1 nonsynonymous","D137G",1
"lib2","SARS-CoV-2","CATAAGAGGATAACCC",7,6.01,NA,NA,NA,NA,NA,NA,"stop","C31K D90* F160R",3
"lib2","SARS-CoV-2","CATAAGAGGGTGGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C31R A42R F70Y V77* P133L I142P F156N",7
"lib2","SARS-CoV-2","CATAAGAGGTGTTCTA",7,36.43,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9W S113N E135L",3
"lib2","SARS-CoV-2","CATAAGATATATTTCG",1,12.84,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G9W V20G E76G G86M R124S",5
"lib2","SARS-CoV-2","CATAAGATATCGCCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y39W F99M K114P L122* T170D",5
"lib2","SARS-CoV-2","CATAAGATCTGATGTG",18,166.62,10.65,-0.18,0.05,2.93,1.08,0,">1 nonsynonymous","F17W S36E A81W N151K",4
"lib2","SARS-CoV-2","CATAAGCAATCCAAGC",11,251.57,10.86,0.02,0.06,2.9,1.1,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","CATAAGCACCAGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* L57* Y121P F126N E141F",5
"lib2","SARS-CoV-2","CATAAGCACCTTAGCT",5,8.51,6,-4.84,1.92,3,1.02,0,">1 nonsynonymous","N58H P82L Y119L",3
"lib2","SARS-CoV-2","CATAAGCAGTAATAAC",8,55.3,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","I88N",1
"lib2","SARS-CoV-2","CATAAGCATCATTTAC",1,13.11,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","T3R F44T K94T P169T",4
"lib2","SARS-CoV-2","CATAAGCCAATCAGGC",1,30.19,7.02,-3.81,0.36,1.5,1.15,0.02,">1 nonsynonymous","S108L K128N",2
"lib2","SARS-CoV-2","CATAAGCCAGAAGTCT",4,42.34,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A14L L38K F167T",3
"lib2","SARS-CoV-2","CATAAGCGAAATAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T N120Y I138G",3
"lib2","SARS-CoV-2","CATAAGCGAGGAGATA",1,40.78,10.85,0.02,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAAGCGGAAAAAAA",4,165.46,10.44,-0.4,0.03,2.85,1.06,0,">1 nonsynonymous","T100K R136M",2
"lib2","SARS-CoV-2","CATAAGCTTAGAAGTA",9,143.18,10.94,0.1,0.08,2.91,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAAGGAACCGTATG",7,27.53,9.11,-1.72,0.4,1.5,1.04,0.08,">1 nonsynonymous","T15Y G51M E141M",3
"lib2","SARS-CoV-2","CATAAGGACAAAAAAG",4,50.84,10.02,-0.82,0.06,2.88,1.01,0,">1 nonsynonymous","N64I D75S E154D",3
"lib2","SARS-CoV-2","CATAAGGATGAAAGCG",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R R127V",2
"lib2","SARS-CoV-2","CATAAGGATGTAAGTA",5,19.53,10.77,-0.06,0.09,2.71,1.31,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CATAAGGATTTAAGTA",2,24.63,9.86,-0.98,0.08,2.6,1.04,0,">1 nonsynonymous","A89I T201G",2
"lib2","SARS-CoV-2","CATAAGGCAAGACTTG",6,62.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K94M N118D P161Q F167P",4
"lib2","SARS-CoV-2","CATAAGGGCTCAATTT",2,16.95,6.22,-4.62,0.37,1.5,1.06,0.01,">1 nonsynonymous","L5T F134Y V153A P177T",4
"lib2","SARS-CoV-2","CATAAGGTCAATTTTA",4,92.31,10.63,-0.21,0.04,2.94,1.07,0,">1 nonsynonymous","C61L R78S",2
"lib2","SARS-CoV-2","CATAAGGTTATCTTAA",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y D34P N64F P96F V103Y N157G",6
"lib2","SARS-CoV-2","CATAAGTCGACCGAGT",9,121.68,9.95,-0.89,0.1,2.3,1.03,0,"1 nonsynonymous","I72M",1
"lib2","SARS-CoV-2","CATAAGTCGTTAACAG",8,79.6,10.03,-0.81,0.05,2.5,1,0,">1 nonsynonymous","Y91G V173K",2
"lib2","SARS-CoV-2","CATAAGTGTAAATCTG",1,33.18,10.62,-0.22,0.09,2.95,1,0,">1 nonsynonymous","P54A V77M",2
"lib2","SARS-CoV-2","CATAAGTGTACACACC",3,141.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5M K56M G172N",3
"lib2","SARS-CoV-2","CATAAGTTCCTACATG",6,11.22,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","A14R D68K",2
"lib2","SARS-CoV-2","CATAAGTTTAAGCCTC",1,7.13,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F44M S108G Y121T",3
"lib2","SARS-CoV-2","CATAAGTTTGTCAAGT",2,23.49,8.4,-2.43,0.18,2.01,1.07,0.01,">1 nonsynonymous","V32L D90Q Y121S G166S",4
"lib2","SARS-CoV-2","CATAAGTTTTCCTAGA",5,54.4,9.68,-1.16,0.08,2.01,1.03,0,">1 nonsynonymous","L5E N13M L60M V77M",4
"lib2","SARS-CoV-2","CATAATAAAAGACAAT",3,73.11,9.45,-1.38,0.07,2.66,1.06,0,">1 nonsynonymous","P54F C61P E154W",3
"lib2","SARS-CoV-2","CATAATAAACTCTTTT",1,25.98,10.9,0.07,0.2,2.61,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CATAATAAAGATAACC",3,19.02,6,-4.84,0.56,3,1.05,0,">1 nonsynonymous","S36K D90G N92T",3
"lib2","SARS-CoV-2","CATAATAAATCCTGTG",5,67.07,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8L C61S V103F",3
"lib2","SARS-CoV-2","CATAATAAATGATGGA",2,80.8,9.2,-1.64,0.06,2.91,1.12,0,">1 nonsynonymous","N157G T201A",2
"lib2","SARS-CoV-2","CATAATAAATGTAATC",4,37.22,9.93,-0.91,0.08,1.99,1,0,">1 nonsynonymous","S53N L57S D98P N151D",4
"lib2","SARS-CoV-2","CATAATAACGCATAGC",10,2.81,NA,NA,NA,NA,NA,NA,"stop","N4* T15F L60A D90S G101S R127V T170Y Q176W",8
"lib2","SARS-CoV-2","CATAATAATAAGTACC",2,32.77,10.17,-0.67,0.09,2.65,1.04,0,"1 nonsynonymous","A81D",1
"lib2","SARS-CoV-2","CATAATAATGAACCTA",4,14.63,6.11,-4.73,0.53,3,1.12,0.01,">1 nonsynonymous","S41F V103W F160G",3
"lib2","SARS-CoV-2","CATAATAATTATGTTG",6,26.57,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15S Y35F S43N F62K Y91R V103S D112W P149T",8
"lib2","SARS-CoV-2","CATAATAATTGGATCA",1,26.57,10.91,0.08,0.08,2.92,1.09,0,">1 nonsynonymous","L5M Q84A G152S",3
"lib2","SARS-CoV-2","CATAATACAAATACAT",5,63.03,10.84,0.01,0.05,2.87,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","CATAATACAGAGGAAT",2,14.17,10.7,-0.13,0.09,2.78,1.26,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAATACTCTAGGTA",3,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59F F99R W106S S113T Y165W",5
"lib2","SARS-CoV-2","CATAATACTTTGTCGA",7,42.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49M P82K Y175R T201Y",4
"lib2","SARS-CoV-2","CATAATAGAAAAAGTG",1,10.88,6,-4.84,1.07,1.5,1.06,0.01,">1 nonsynonymous","I2T D59F A89Y N120Q T140H",5
"lib2","SARS-CoV-2","CATAATAGACGCCTAG",1,24.27,7.61,-3.23,0.2,1.82,1.16,0.01,">1 nonsynonymous","N157M V173S",2
"lib2","SARS-CoV-2","CATAATAGGCCTTTGA",9,165.78,10.33,-0.5,0.04,2.92,1.05,0,">1 nonsynonymous","G9T Y39R K48L",3
"lib2","SARS-CoV-2","CATAATAGGTTGAGTA",8,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P F99G S200K",3
"lib2","SARS-CoV-2","CATAATATAGGTTACA",6,41.74,9.62,-1.22,0.1,2.01,1.01,0,"1 nonsynonymous","P82A",1
"lib2","SARS-CoV-2","CATAATATCTAATTTA",14,155.29,6.24,-4.6,0.52,1.5,1.15,0.01,">1 nonsynonymous","P7M F62L T148F N157C",4
"lib2","SARS-CoV-2","CATAATATTATATGGT",2,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N V77W D98G F167W",4
"lib2","SARS-CoV-2","CATAATCACCAATTTA",2,13.63,6.73,-4.11,0.33,1.5,1.13,0.03,">1 nonsynonymous","Q84P D98Y",2
"lib2","SARS-CoV-2","CATAATCACCTGCCAA",1,6.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E T15F Y21V",3
"lib2","SARS-CoV-2","CATAATCATACTAGCA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","A42R N107F E135* P149K",4
"lib2","SARS-CoV-2","CATAATCCAAAAAATG",6,37.73,10.81,-0.03,0.05,2.9,1.09,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CATAATCCAAAGCACA",9,165.55,8.12,-2.72,0.13,1.94,1.08,0.01,">1 nonsynonymous","K56L G146V G166S",3
"lib2","SARS-CoV-2","CATAATCCAAAGCCGA",5,186.17,10.73,-0.1,0.03,2.96,1.04,0,">1 nonsynonymous","K48N S147L",2
"lib2","SARS-CoV-2","CATAATCCAAAGTGCC",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G D75Y Q84V Y121N",4
"lib2","SARS-CoV-2","CATAATCCAAATTAGC",4,82.41,10.18,-0.66,0.04,2.84,1.03,0,">1 nonsynonymous","S41I T85L",2
"lib2","SARS-CoV-2","CATAATCGGATATAAT",8,99.78,10.2,-0.63,0.03,2.92,1.06,0,"1 nonsynonymous","C31F",1
"lib2","SARS-CoV-2","CATAATCTAAAATGTG",14,314.32,10.66,-0.18,0.03,2.95,1.04,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CATAATGAACCTCCTA",4,68.05,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V37E S69R G117V K128L H189C",5
"lib2","SARS-CoV-2","CATAATGACGTCAAAC",1,12.48,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y39W K56T F99S Y143R",4
"lib2","SARS-CoV-2","CATAATGATGCATCAG",11,92.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93N I138L",2
"lib2","SARS-CoV-2","CATAATGGAAAAAATC",1,9.47,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","L131K",1
"lib2","SARS-CoV-2","CATAATGGAGAAAGCC",7,57.37,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S41T S69G L131T Q168F C195V",5
"lib2","SARS-CoV-2","CATAATGGCTTTAATA",19,5.81,NA,NA,NA,NA,NA,NA,"stop","C61* D90N",2
"lib2","SARS-CoV-2","CATAATGTCAAGAGAG",12,9.46,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","CATAATGTTGGATAAA",2,15.89,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25L G83I T140D Y165Q",4
"lib2","SARS-CoV-2","CATAATTAACTATATA",2,7.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93I P149W",2
"lib2","SARS-CoV-2","CATAATTACCGCGAGA",9,94.64,10.3,-0.53,0.03,2.98,1.03,0,">1 nonsynonymous","T63K T170Q",2
"lib2","SARS-CoV-2","CATAATTACTGACGGG",4,64.19,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F17L V37M K48E Y93L",4
"lib2","SARS-CoV-2","CATAATTAGCAACACC",3,1.23,NA,NA,NA,NA,NA,NA,"stop","G9* S53F D68M V77S D90P D97V P149L V153W F167T A190L K199M",11
"lib2","SARS-CoV-2","CATAATTAGGTGCCTA",1,56,9.66,-1.18,0.05,2.93,1.05,0,"1 nonsynonymous","A145K",1
"lib2","SARS-CoV-2","CATAATTATCCGACTT",4,123.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V77Q P133L",2
"lib2","SARS-CoV-2","CATAATTATGGAACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V37S Y93*",2
"lib2","SARS-CoV-2","CATAATTATTCTTCGG",11,66.86,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6K D90Y C102I T148F",4
"lib2","SARS-CoV-2","CATAATTCAACCCAAT",4,6.64,7.37,-3.47,0.43,1.5,1.07,0.03,">1 nonsynonymous","A33T W106C F160C A190R",4
"lib2","SARS-CoV-2","CATAATTCAACTTTTT",6,33.77,6,-4.84,2,2.34,1.11,0,">1 nonsynonymous","A42M A81T G101C",3
"lib2","SARS-CoV-2","CATAATTCCTGCGGTG",11,1.11,NA,NA,NA,NA,NA,NA,"stop","N1S G74* N107C",3
"lib2","SARS-CoV-2","CATAATTCTTTGCACG",2,31.42,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","T3I G9T P82F D90N G174V",5
"lib2","SARS-CoV-2","CATAATTGAACCAACT",3,83.36,10.37,-0.47,0.06,2.88,1.07,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","CATAATTGCGCAGAAC",3,10.24,6.32,-4.52,0.66,3,1.27,0.03,">1 nonsynonymous","N13Y K87P F99C",3
"lib2","SARS-CoV-2","CATAATTGTACCCACG",1,7.07,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N107F P149L",2
"lib2","SARS-CoV-2","CATAATTGTGCGCTAA",2,49.17,10.76,-0.08,0.05,2.97,1,0,">1 nonsynonymous","N64R L122V S184V",3
"lib2","SARS-CoV-2","CATAATTGTTAGCTTA",10,120.27,10.8,-0.03,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAATTTAGTCACAC",2,45.59,9.77,-1.07,0.09,2.29,1.05,0,">1 nonsynonymous","N4A R27T Y91S",3
"lib2","SARS-CoV-2","CATACAAAAAATACGA",10,72.49,6.77,-4.07,0.44,1.5,1.2,0.03,">1 nonsynonymous","N1M G9P W106E",3
"lib2","SARS-CoV-2","CATACAAAATCTAGCA",7,157.77,10.83,-0.01,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CATACAAACAAACCAG",5,48.11,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V37R N64M K87S L95F F167M",5
"lib2","SARS-CoV-2","CATACAAACAAGTCAC",2,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L N107F P161R",3
"lib2","SARS-CoV-2","CATACAAACGGCAAAT",2,29.24,10.96,0.12,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACAAAGAATGTCT",1,5.43,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","A14N F62R G86F",3
"lib2","SARS-CoV-2","CATACAAAGCAGGCAG",8,30.18,9.86,-0.98,0.2,1.62,1.07,0.02,">1 nonsynonymous","G51I N58L Q168H",3
"lib2","SARS-CoV-2","CATACAAATAACTAAC",1,0.28,NA,NA,NA,NA,NA,NA,"stop","T3S S45N Y50* Y91V",4
"lib2","SARS-CoV-2","CATACAAATCGCACTC",2,7.05,10.75,-0.08,0.08,3,1,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","CATACAACACTAATCA",5,65.76,9.98,-0.85,0.08,2.21,1.09,0,">1 nonsynonymous","V52H A81S",2
"lib2","SARS-CoV-2","CATACAACCAGTTTTC",10,153,10.86,0.02,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACAACTGGGTGGG",3,44.5,6.47,-4.37,0.58,1.5,1.19,0.02,">1 nonsynonymous","F12H A22K V115A S129P Q176M",5
"lib2","SARS-CoV-2","CATACAAGCAAGAAAG",6,74.89,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y50L G101H",2
"lib2","SARS-CoV-2","CATACAATAATAGGTG",3,135.21,10.92,0.09,0.06,2.99,1.04,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","CATACAATAATGTTGA",8,60.92,6.07,-4.76,0.82,1.51,1.16,0.03,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","CATACAATAGTCACAA",7,70.97,10.14,-0.7,0.05,2.78,1.04,0,">1 nonsynonymous","N40R Q84K G116K N151Q Y178F",5
"lib2","SARS-CoV-2","CATACAATCATTTCAA",4,81.14,10.13,-0.7,0.04,2.97,1.03,0,">1 nonsynonymous","E154V V173I K199L",3
"lib2","SARS-CoV-2","CATACAATCGCACCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","T3V V20M R27* K198R",4
"lib2","SARS-CoV-2","CATACAATGTCGCAAA",10,126.54,9.98,-0.85,0.06,2.33,1.08,0,">1 nonsynonymous","V77Q T148N",2
"lib2","SARS-CoV-2","CATACACAATCAAAAA",1,9.74,10.81,-0.02,0.06,3,1,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","CATACACACTGCACTC",4,151.73,10.12,-0.71,0.03,3,1.01,0,"1 nonsynonymous","F126V",1
"lib2","SARS-CoV-2","CATACACATTATCCCA",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W W106Q Q144F P149S",4
"lib2","SARS-CoV-2","CATACACCGCACCAAA",6,1.8,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","CATACACCTTAAGGCG",8,110.8,8.37,-2.47,0.12,2.82,1.1,0.01,">1 nonsynonymous","T3K I138Q G166E",3
"lib2","SARS-CoV-2","CATACACCTTCATAAG",14,281.38,10.86,0.03,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACACTAAAAATAT",3,11.86,6.43,-4.41,0.37,1.5,1.04,0.01,">1 nonsynonymous","S41V G51V D68R R73Y Y119G K132P A145N A190V",8
"lib2","SARS-CoV-2","CATACACTGCTATACT",10,74.7,8.33,-2.5,0.34,1.5,1.04,0.05,">1 nonsynonymous","F62Y Y91P N118A",3
"lib2","SARS-CoV-2","CATACACTTCAGAAAT",2,24.54,10.21,-0.63,0.09,2.6,1.09,0,"1 nonsynonymous","S69Q",1
"lib2","SARS-CoV-2","CATACACTTCTTCCGA",7,120.8,10.86,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACAGAATTTTAGG",3,10.83,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","G83S V103I D137C S147W",4
"lib2","SARS-CoV-2","CATACAGATTTTTGCT",3,16.7,9.6,-1.23,0.14,2.3,1.06,0.01,">1 nonsynonymous","L5P G86D V173L S184G P197R",5
"lib2","SARS-CoV-2","CATACAGCAAATTTGG",3,82.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37C L122V E154L Y175I",4
"lib2","SARS-CoV-2","CATACAGCAACTGGCG",4,22.16,10.72,-0.12,0.09,2.88,1.11,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","CATACAGCGGCCCTCG",4,53.88,10.23,-0.61,0.06,2.79,1.06,0,">1 nonsynonymous","S36V I88V P149S T201C",4
"lib2","SARS-CoV-2","CATACAGGATCAAACC",3,113.84,10.65,-0.18,0.05,2.92,1.08,0,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","CATACAGTAAAGGCTA",3,6.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A G83D K94P S129M E141H",5
"lib2","SARS-CoV-2","CATACAGTTATAAATA",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K P54A Y165T P197A",4
"lib2","SARS-CoV-2","CATACATAAAGGACCG",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40H K56R R78P",3
"lib2","SARS-CoV-2","CATACATAATCTGACA",1,9.75,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V77Y T85H N107L",3
"lib2","SARS-CoV-2","CATACATAGACAGCTA",5,128.96,10.08,-0.75,0.04,2.87,1.01,0,">1 nonsynonymous","G9Q T15M F160P",3
"lib2","SARS-CoV-2","CATACATAGGCAACAG",2,99.92,10.81,-0.02,0.03,2.96,1.05,0,"1 nonsynonymous","T3K",1
"lib2","SARS-CoV-2","CATACATAGTATTATC",2,50.99,10.99,0.15,0.06,2.93,1.09,0,">1 nonsynonymous","S36L L122S",2
"lib2","SARS-CoV-2","CATACATATCTGAATT",1,1.43,NA,NA,NA,NA,NA,NA,"stop","G9* L125M Q163M",3
"lib2","SARS-CoV-2","CATACATCGGCTGGAT",3,51.51,9.81,-1.02,0.11,2.32,1.04,0,">1 nonsynonymous","A33S A105Y Q163K",3
"lib2","SARS-CoV-2","CATACATGCCAAAATT",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R N107S E154V C158L",4
"lib2","SARS-CoV-2","CATACATTAGCCCATC",4,9.26,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61I F99I Y119M E141D R179S",5
"lib2","SARS-CoV-2","CATACATTCTCCCATC",8,92.96,6.45,-4.38,0.37,1.5,1.17,0.01,">1 nonsynonymous","Y93R R127N",2
"lib2","SARS-CoV-2","CATACATTTACGCCGT",2,21.77,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y39R L60Y P82L C102P",4
"lib2","SARS-CoV-2","CATACCAAAATAATAA",2,90.1,10.89,0.06,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACCAACAAGAGTG",2,7.37,9.54,-1.29,0.38,2.11,1.01,0.05,">1 nonsynonymous","S41W Q84K D90T P133A E141F",5
"lib2","SARS-CoV-2","CATACCAACACGTGGA",1,16.87,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","V37D D90M S113L P133A G152V",5
"lib2","SARS-CoV-2","CATACCACAAAAGCCT",1,46.26,10.91,0.07,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACCACAGACAGTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","V115L G116P Y123N T201*",4
"lib2","SARS-CoV-2","CATACCACTGCTAAAT",22,702.63,8.19,-2.65,0.13,2.01,1.07,0.01,">1 nonsynonymous","K128G Q176T",2
"lib2","SARS-CoV-2","CATACCAGAAATAGCT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12S S29* C61I G83L G86S N110L",6
"lib2","SARS-CoV-2","CATACCAGATCACTTA",1,23.18,10.78,-0.06,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACCAGATTAAAGT",3,43.59,10.07,-0.77,0.06,2.88,1.06,0,">1 nonsynonymous","L60P L122C T201Y",3
"lib2","SARS-CoV-2","CATACCAGTAACACGT",5,21.24,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S36R C61I I80K G152L",4
"lib2","SARS-CoV-2","CATACCATATCCGTGT",4,23.73,7.97,-2.86,0.17,1.85,1.12,0.02,">1 nonsynonymous","G83L F167L",2
"lib2","SARS-CoV-2","CATACCATGAACAATC",3,119.44,10.51,-0.33,0.05,2.92,1.09,0,">1 nonsynonymous","P7A G116N",2
"lib2","SARS-CoV-2","CATACCATGGCCTCTA",3,18.27,8.98,-1.85,0.17,2.27,1.14,0.01,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","CATACCATTGTAAGAA",2,18.08,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S29L Y66F N151C G166P Y178H",5
"lib2","SARS-CoV-2","CATACCCAAGTGTCGA",28,1119.61,10.72,-0.12,0.03,2.98,1.03,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","CATACCCACAAATTGA",2,26.47,10.4,-0.44,0.06,2.95,1.08,0,">1 nonsynonymous","S53Y A105S S200R",3
"lib2","SARS-CoV-2","CATACCCACCTCACAT",10,102.49,9.36,-1.47,0.08,1.87,1.07,0,">1 nonsynonymous","N4C N30C A42E L60K N110R G116E",6
"lib2","SARS-CoV-2","CATACCCAGACCAGGT",18,131.8,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L60T F70V T201M",3
"lib2","SARS-CoV-2","CATACCCAGTGTAAGT",4,0,NA,NA,NA,NA,NA,NA,"stop","T55D S69* Y121*",3
"lib2","SARS-CoV-2","CATACCCGGTGAAGGA",4,34.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L D137E",2
"lib2","SARS-CoV-2","CATACCGAACATTCAG",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S N30K C61P K132L G152S Y178L",6
"lib2","SARS-CoV-2","CATACCGAAGCATTCA",15,94.67,10.66,-0.18,0.03,2.91,1.07,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","CATACCGACTTCGGGA",3,31.55,9.06,-1.78,0.08,1.87,1.05,0,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","CATACCGCCTAGGAAT",2,34.25,10.83,0,0.06,2.94,1.06,0,">1 nonsynonymous","N64T D97F",2
"lib2","SARS-CoV-2","CATACCGCGATGTCTG",11,183.57,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","R25Q G51S A89I G116F L122W H189N",6
"lib2","SARS-CoV-2","CATACCGGTCAAACAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","C61K E141K G155Y Q176*",4
"lib2","SARS-CoV-2","CATACCTAATGTCAAA",2,11.44,11.07,0.23,0.09,3,1,0,">1 nonsynonymous","I2T N24Q",2
"lib2","SARS-CoV-2","CATACCTCCAAACCAG",1,26.62,6.15,-4.69,0.88,1.5,1.08,0.02,">1 nonsynonymous","R16S A89T I104C T140Y G146K C158L Y165K Q176W",8
"lib2","SARS-CoV-2","CATACCTCCTCATAAT",2,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y F12T V65R",3
"lib2","SARS-CoV-2","CATACCTGGCGTTCCA",7,56.6,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","T3M L57K Y91Q P177Y K199T",5
"lib2","SARS-CoV-2","CATACCTTAGGATAAG",15,189.94,10.74,-0.09,0.04,2.93,1.07,0,"1 nonsynonymous","S147L",1
"lib2","SARS-CoV-2","CATACCTTCACTTAAA",7,2.74,NA,NA,NA,NA,NA,NA,"stop","A22T A89*",2
"lib2","SARS-CoV-2","CATACGAAGACTCATT",4,14.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9A N107R G116S Q144Y L162T",5
"lib2","SARS-CoV-2","CATACGAAGCAGAAGG",1,48.44,10.16,-0.68,0.08,2.65,1.1,0,">1 nonsynonymous","G9V T100A",2
"lib2","SARS-CoV-2","CATACGAAGCCCTACA",6,3.45,NA,NA,NA,NA,NA,NA,"stop","C49S R78* G86A V115W N151I L183S",6
"lib2","SARS-CoV-2","CATACGAATAGATCCT",13,230.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10K C150Y",2
"lib2","SARS-CoV-2","CATACGACGACAAAAG",8,54.85,6,-4.84,2,1.55,1.18,0,">1 nonsynonymous","P82K K87V Y143K V181K",4
"lib2","SARS-CoV-2","CATACGACGACACCCT",1,67.07,10.28,-0.55,0.03,2.91,1.02,0,">1 nonsynonymous","E10S G152Y",2
"lib2","SARS-CoV-2","CATACGACGGCTTTTG",6,35.2,8.8,-2.03,0.05,2.96,1.03,0,">1 nonsynonymous","P7T Y119L",2
"lib2","SARS-CoV-2","CATACGAGGTACCCGT",2,104.48,10.85,0.02,0.05,2.91,1.1,0,"1 nonsynonymous","T140M",1
"lib2","SARS-CoV-2","CATACGATAGATCAAA",10,52.36,7.76,-3.08,0.09,1.5,1.08,0,">1 nonsynonymous","R127D S164H S184M",3
"lib2","SARS-CoV-2","CATACGATGCATAGTG",10,102.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R27M S36N Y93R L188V",4
"lib2","SARS-CoV-2","CATACGCAAAAAAGAA",8,136.42,10.81,-0.03,0.07,2.82,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACGCAGTTATCCG",16,123.58,9.66,-1.17,0.07,2.18,1.04,0,">1 nonsynonymous","L5N N24L A33C N120R I138Q",5
"lib2","SARS-CoV-2","CATACGCTAAGACTTT",13,171.28,10.83,-0.01,0.05,2.94,1.06,0,"1 nonsynonymous","T3M",1
"lib2","SARS-CoV-2","CATACGCTGACGTAGT",26,447,10.79,-0.04,0.04,2.91,1.11,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","CATACGCTGAGATTAA",4,21.92,9.57,-1.27,0.13,1.88,1.15,0.01,">1 nonsynonymous","D90V N130L",2
"lib2","SARS-CoV-2","CATACGGAAACAAAAG",1,15.4,10.61,-0.23,0.07,2.9,1.09,0,">1 nonsynonymous","C61V V65F",2
"lib2","SARS-CoV-2","CATACGGAATCATACT",1,22.36,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L5M V37F V71W N171V",4
"lib2","SARS-CoV-2","CATACGTAATATTTTT",2,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124T R136S",2
"lib2","SARS-CoV-2","CATACGTACAATGAGC",3,82.6,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38N N107I",2
"lib2","SARS-CoV-2","CATACGTAGTTATATT",4,6.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M D90L P161A G174R R179T",5
"lib2","SARS-CoV-2","CATACGTATAAGCCTA",19,226.47,9.8,-1.04,0.05,2.05,1.09,0,"1 nonsynonymous","L38K",1
"lib2","SARS-CoV-2","CATACGTCTACATTTA",4,129.47,10.83,-0.01,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","CATACGTGAACACGCA",1,26.86,9.24,-1.59,0.12,2.7,1.05,0.01,">1 nonsynonymous","C61E K87F S108C G174N",4
"lib2","SARS-CoV-2","CATACGTGAAGAATTA",5,68.85,10.79,-0.05,0.03,2.94,1.08,0,"1 nonsynonymous","I28L",1
"lib2","SARS-CoV-2","CATACGTGCTCGACTT",9,58.87,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N64H G83N V103C E135W C150H",5
"lib2","SARS-CoV-2","CATACGTGGCAGCAAA",3,25.57,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","T85H D112N C150P",3
"lib2","SARS-CoV-2","CATACTAAAACCTATA",5,23.54,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G9L A14P I80G L95E T148R",5
"lib2","SARS-CoV-2","CATACTAAAAGTCTAT",2,16.08,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","G101K E135L G196C",3
"lib2","SARS-CoV-2","CATACTAAGATTACTG",2,33.29,6.97,-3.87,0.26,1.5,1.04,0.02,">1 nonsynonymous","L57R C158G",2
"lib2","SARS-CoV-2","CATACTAATTAATAGA",4,12,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1V P161K Q176S",3
"lib2","SARS-CoV-2","CATACTAATTGCTAGC",6,33.08,8.92,-1.91,0.22,1.58,1.05,0.02,">1 nonsynonymous","G86S I142Y",2
"lib2","SARS-CoV-2","CATACTACCCAAGACC",2,20.21,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N92M Y123K G166E Q176L",4
"lib2","SARS-CoV-2","CATACTACTCTATAAT",5,38.51,10.85,0.01,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CATACTACTTGGATAG",3,35.6,10.23,-0.61,0.07,2.82,1,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","CATACTAGATCACCGT",3,1.06,NA,NA,NA,NA,NA,NA,"stop","R16L Y50C N118K E141*",4
"lib2","SARS-CoV-2","CATACTAGCGGAGGCA",4,4.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","CATACTATACGGTACT",4,164.95,10.19,-0.65,0.06,2.75,1.02,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","CATACTATTGAGAGCA",1,40.99,6,-4.84,2,1.5,1.11,0.05,">1 nonsynonymous","E10N F44V Q144R N157Y Y175F",5
"lib2","SARS-CoV-2","CATACTCAAGAACCTA",1,0.73,NA,NA,NA,NA,NA,NA,"stop","C31H A33S Q163*",3
"lib2","SARS-CoV-2","CATACTCCAAGACGAC",3,32.6,9.18,-1.65,0.06,2.9,1.04,0,">1 nonsynonymous","Y119K I138W",2
"lib2","SARS-CoV-2","CATACTCCATAACTTA",7,1.83,NA,NA,NA,NA,NA,NA,"stop","W23I N40*",2
"lib2","SARS-CoV-2","CATACTCCATGATACT",1,47.11,8.76,-2.08,0.13,2.28,1.05,0.01,">1 nonsynonymous","N4I A145R E154F F160N",4
"lib2","SARS-CoV-2","CATACTCCTGAGCAGG",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103W R136S",2
"lib2","SARS-CoV-2","CATACTGACAACGATA",4,43.73,6,-4.84,1.9,1.5,1.13,0.01,">1 nonsynonymous","W23L F62R F99V Y121S R127G",5
"lib2","SARS-CoV-2","CATACTGACCTTAGTA",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85C S139R",2
"lib2","SARS-CoV-2","CATACTGACGTAGCCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R V182N",2
"lib2","SARS-CoV-2","CATACTGACTTTCCCT",7,36.37,6,-4.84,1.41,1.5,1.12,0.02,">1 nonsynonymous","G51I Q84N L95V I138L N157T G174R",6
"lib2","SARS-CoV-2","CATACTGAGCAGCACC",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47D S129F G172V",3
"lib2","SARS-CoV-2","CATACTGATATGTCAA",2,6.6,10.72,-0.12,0.13,3,1,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","CATACTGATGGAATAA",2,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M D59V I104K",3
"lib2","SARS-CoV-2","CATACTGCAAGCAAAA",4,41.95,9.75,-1.08,0.09,2.12,1,0,">1 nonsynonymous","F62G T85M P149Y",3
"lib2","SARS-CoV-2","CATACTGCTCTCCATA",3,53.3,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12G Y143S Q176S L187D",4
"lib2","SARS-CoV-2","CATACTGGACTGATCA",3,55.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A33S D34V G86V G117N P149I",5
"lib2","SARS-CoV-2","CATACTGTTCGATGAA",5,29.92,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G51W N107H",2
"lib2","SARS-CoV-2","CATACTGTTTAGTAGC",2,13.3,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","L38P S113V S139V",3
"lib2","SARS-CoV-2","CATACTTACAAGAAAT",15,4.68,NA,NA,NA,NA,NA,NA,"stop","L38W I72* T85M I104Q D112Y",5
"lib2","SARS-CoV-2","CATACTTACGTCACTG",8,52.36,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R73Y Y91C T201V",3
"lib2","SARS-CoV-2","CATACTTAGGGCCTGT",7,9.88,NA,NA,NA,NA,NA,NA,"stop","A42Q Y91K W106* Y121I",4
"lib2","SARS-CoV-2","CATACTTCATGCGACA",2,75.3,10.26,-0.57,0.06,2.76,1.05,0,">1 nonsynonymous","I2R S41R P96S",3
"lib2","SARS-CoV-2","CATACTTCGAACAAGC",5,73.92,10.55,-0.29,0.06,2.92,1,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","CATACTTCTGTTTGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S108D",2
"lib2","SARS-CoV-2","CATACTTGTTTGCCTA",1,6.49,10.52,-0.32,0.21,2.62,1.39,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CATACTTTTGCTGGTA",3,13.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97K D112N",2
"lib2","SARS-CoV-2","CATAGAAAAAATTGAT",9,7.66,NA,NA,NA,NA,NA,NA,"stop","S53Y G83Y D98* Q168F",4
"lib2","SARS-CoV-2","CATAGAAAACAAGATG",6,132.32,9.97,-0.87,0.05,2.56,1.01,0,">1 nonsynonymous","S53R Y123T S200M",3
"lib2","SARS-CoV-2","CATAGAAACAATGGTA",18,6.67,NA,NA,NA,NA,NA,NA,"stop","W23* D34G D97E K128V C150Y T201L",6
"lib2","SARS-CoV-2","CATAGAAATATGTGCG",5,21.6,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F44R P82L I88V V103Y",4
"lib2","SARS-CoV-2","CATAGAACATGCCGAG",3,12.6,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S36Y P149L L162R",3
"lib2","SARS-CoV-2","CATAGAACGACTGGAA",11,110.37,10.21,-0.62,0.02,2.96,1.03,0,">1 nonsynonymous","L95V G174R",2
"lib2","SARS-CoV-2","CATAGAACTCAGACCA",3,58.77,10.73,-0.1,0.06,2.84,1.17,0,"1 nonsynonymous","N1C",1
"lib2","SARS-CoV-2","CATAGAAGAGAACTAT",16,185.3,8.52,-2.32,0.11,2.94,1.08,0,"1 nonsynonymous","F126G",1
"lib2","SARS-CoV-2","CATAGAAGCTTAACGA",2,80.95,11.06,0.23,0.05,3,1,0,"1 nonsynonymous","E154K",1
"lib2","SARS-CoV-2","CATAGAAGCTTCCGTT",11,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L T140L K198W",3
"lib2","SARS-CoV-2","CATAGAAGGATTGGTA",1,12.18,9.57,-1.27,0.13,2.71,1.12,0.01,">1 nonsynonymous","V11I Y39W D112E",3
"lib2","SARS-CoV-2","CATAGAAGGTACGTGT",4,142.72,9.93,-0.91,0.03,2.86,1.08,0,">1 nonsynonymous","Q84L F156L",2
"lib2","SARS-CoV-2","CATAGAAGTTCTCAAA",2,38.97,10.55,-0.28,0.06,2.89,1.04,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","CATAGAATAGCCCCCC",4,27.18,6,-4.84,2,2.33,1.11,0.01,">1 nonsynonymous","F17V F99N D112I V173H",4
"lib2","SARS-CoV-2","CATAGAATCTCTTGTG",2,22.64,11.05,0.21,0.07,2.91,1.09,0,">1 nonsynonymous","N151K Q168F",2
"lib2","SARS-CoV-2","CATAGAATCTTTCGTA",1,7.56,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A33N D90G L122S Y178I L183D",5
"lib2","SARS-CoV-2","CATAGAATTAAGAATC",4,30.56,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","R16M C49I I88G",3
"lib2","SARS-CoV-2","CATAGACAAAAAATAA",2,13.95,6,-4.84,2,1.75,1.07,0.03,">1 nonsynonymous","T55N Y91G C102V L162A",4
"lib2","SARS-CoV-2","CATAGACAGAGTTTAC",1,1.89,NA,NA,NA,NA,NA,NA,"stop","D98A G116* V181P",3
"lib2","SARS-CoV-2","CATAGACATACTGTAT",6,61.43,7,-3.83,0.13,1.66,1.09,0,">1 nonsynonymous","C6L V37P N64P Y119K L125P N130K",6
"lib2","SARS-CoV-2","CATAGACCAAAAAGAC",5,0,NA,NA,NA,NA,NA,NA,"stop","I28W N58* D98S I142K",4
"lib2","SARS-CoV-2","CATAGACCAAGCGTGT",9,66.88,6,-4.84,1.34,1.5,1.18,0.02,">1 nonsynonymous","F12A V71S",2
"lib2","SARS-CoV-2","CATAGACCATAATTCA",15,115.31,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K87W R124Y",2
"lib2","SARS-CoV-2","CATAGACCCTAAAAGC",36,546.08,10.75,-0.09,0.03,2.93,1.07,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","CATAGACTACCTCTGC",2,24.26,10.58,-0.25,0.08,2.93,1.06,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","CATAGACTATTATCAC",1,22.33,9.74,-1.1,0.18,2.28,1.1,0.02,">1 nonsynonymous","S41C W106R P191N",3
"lib2","SARS-CoV-2","CATAGACTTATTCTGT",8,161.53,9.79,-1.05,0.05,2.18,1.05,0,">1 nonsynonymous","T63F F134D",2
"lib2","SARS-CoV-2","CATAGAGATACAAGCG",5,332.75,7.57,-3.26,0.1,2.27,1.15,0,"1 nonsynonymous","Y175E",1
"lib2","SARS-CoV-2","CATAGAGGCAAATTTC",2,14.77,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F8W T55Y I88A N92A K128S R136G T201K",7
"lib2","SARS-CoV-2","CATAGAGTAAATTGTT",2,10.84,8.62,-2.22,0.13,2.62,1.22,0.01,">1 nonsynonymous","S43T Y165I N171W",3
"lib2","SARS-CoV-2","CATAGAGTGAATACGA",9,64.25,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A14C F44S L60S A105Q R127V P197D",6
"lib2","SARS-CoV-2","CATAGAGTGCGAAGCT",10,29.77,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G117Y D137E",2
"lib2","SARS-CoV-2","CATAGATAAAAACGCC",22,442.34,10.22,-0.62,0.06,2.65,1.05,0,"1 nonsynonymous","I104H",1
"lib2","SARS-CoV-2","CATAGATAATAAAAAG",3,6.01,9.68,-1.16,0.15,2.67,1.22,0.02,">1 nonsynonymous","S43L G146R",2
"lib2","SARS-CoV-2","CATAGATACATAGAAT",4,53.73,9.04,-1.79,0.09,2.41,1.05,0,">1 nonsynonymous","S139Y Q168T",2
"lib2","SARS-CoV-2","CATAGATCATCCCGAA",2,47.14,8.44,-2.39,0.12,2.25,1.04,0,">1 nonsynonymous","D90I N118S",2
"lib2","SARS-CoV-2","CATAGATCGAGCTGGA",3,23.81,10.48,-0.35,0.05,3,1.01,0,"1 nonsynonymous","V182I",1
"lib2","SARS-CoV-2","CATAGATGAAACGACC",3,104.5,9.99,-0.84,0.04,2.89,1.03,0,">1 nonsynonymous","A14R K87C P149L",3
"lib2","SARS-CoV-2","CATAGATGGACCCCCT",22,356.93,10.27,-0.57,0.02,2.95,1.05,0,">1 nonsynonymous","S45N P169S",2
"lib2","SARS-CoV-2","CATAGATGTAAATTCA",4,57.03,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N24F I72R E141R Y175R H189V",5
"lib2","SARS-CoV-2","CATAGATGTTAATATA",2,36.59,10.06,-0.77,0.09,2.75,1.06,0,">1 nonsynonymous","N58T R78Y F134L",3
"lib2","SARS-CoV-2","CATAGATTTCAAAAAC",5,47.66,10.79,-0.04,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAGATTTTTCAACG",1,82.93,8.18,-2.66,0.31,1.5,1.03,0.04,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","CATAGCAACAAGAAAT",6,41.66,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","P96V V103F E135Y V153T R179W",5
"lib2","SARS-CoV-2","CATAGCAACTCCTGTC",8,303.41,10.42,-0.41,0.04,2.88,1.1,0,">1 nonsynonymous","F62C Y91M T100F",3
"lib2","SARS-CoV-2","CATAGCAAGTTGGATA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","A22N D68A Q84* G86F V180R",5
"lib2","SARS-CoV-2","CATAGCAATGAATGTG",4,43.5,6.28,-4.56,0.87,1.5,1.2,0.05,">1 nonsynonymous","I88D L95T N120I I138P",4
"lib2","SARS-CoV-2","CATAGCACTACAAAGC",1,9.67,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S45F K87Q P96I G101S D112Y E141C Q168G",7
"lib2","SARS-CoV-2","CATAGCATAGCAATCA",2,50.16,6.94,-3.89,0.42,1.5,1.1,0.06,">1 nonsynonymous","G9A D59K G86R",3
"lib2","SARS-CoV-2","CATAGCCAATAATTTT",15,0.9,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","CATAGCCAATGCACAA",11,152.55,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S29M G83I D98S R124A K198I",5
"lib2","SARS-CoV-2","CATAGCCTCCAGCATA",1,1.59,NA,NA,NA,NA,NA,NA,"stop","F12G G86L W106*",3
"lib2","SARS-CoV-2","CATAGCGAATACTATC",1,7.89,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","R25E N64I T140N P161S",4
"lib2","SARS-CoV-2","CATAGCGATATCCCTG",8,329.3,10.83,-0.01,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAGCGCGATTCAAG",3,28.76,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6A C49F F62L N120P R136F",5
"lib2","SARS-CoV-2","CATAGCGGTATCAATG",5,14.64,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C49R I72F I104C F126Y",4
"lib2","SARS-CoV-2","CATAGCGGTGCTCGGG",2,17.52,10.63,-0.2,0.06,2.88,1.12,0,">1 nonsynonymous","Y35L F99Y",2
"lib2","SARS-CoV-2","CATAGCTACTATCACT",1,13.2,6,-4.84,2,3,1.07,0,">1 nonsynonymous","D90N W106K L131R",3
"lib2","SARS-CoV-2","CATAGCTATCGACCAT",2,59.82,10.85,0.01,0.04,2.94,1.07,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CATAGCTTGGATCATA",3,15.54,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","K87L I104S R179H",3
"lib2","SARS-CoV-2","CATAGGAAAGATGTAT",3,31.93,9.22,-1.62,0.06,2.55,1.04,0,">1 nonsynonymous","P7L R73T T201L",3
"lib2","SARS-CoV-2","CATAGGAACAACATAT",7,75.18,9.92,-0.91,0.06,2.08,1.05,0,">1 nonsynonymous","F99I A190D",2
"lib2","SARS-CoV-2","CATAGGAACAAGCACG",6,4.38,NA,NA,NA,NA,NA,NA,"stop","T3M E10Y K48F I80M F99E W106* I142W",7
"lib2","SARS-CoV-2","CATAGGAAGAACCCTA",3,0.01,NA,NA,NA,NA,NA,NA,"stop","E10G L60*",2
"lib2","SARS-CoV-2","CATAGGACATCCAAGT",7,29.05,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A14N G152V V182N P197M",4
"lib2","SARS-CoV-2","CATAGGCAATTGTTAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V V77H T148D V180S",4
"lib2","SARS-CoV-2","CATAGGCACATGAACA",2,14.36,6,-4.84,2,1.5,1.04,0,"1 nonsynonymous","F70C",1
"lib2","SARS-CoV-2","CATAGGCGATGTTCAG",3,1.68,NA,NA,NA,NA,NA,NA,"stop","V11* R25F K94I N110L A192E",5
"lib2","SARS-CoV-2","CATAGGCGGTCAGTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D R124Y",2
"lib2","SARS-CoV-2","CATAGGCGTAGGGGAA",12,152.87,6,-4.84,0.6,1.5,1.14,0.01,">1 nonsynonymous","G9Y R124S",2
"lib2","SARS-CoV-2","CATAGGGAAACTGATA",9,58.25,7.8,-3.03,0.33,1.5,1.07,0.03,">1 nonsynonymous","F8P D34Y N58D L162M T201L",5
"lib2","SARS-CoV-2","CATAGGGACTCCCCAT",4,66.52,8.8,-2.03,0.16,1.76,1.06,0.01,"1 nonsynonymous","S108K",1
"lib2","SARS-CoV-2","CATAGGGCGAGAAGCG",13,109.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6G A14D N107Y",3
"lib2","SARS-CoV-2","CATAGGTAAAAAAAAG",2,77.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A105F Y175D",2
"lib2","SARS-CoV-2","CATAGGTAAAATATTT",4,38.01,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","N92K L131M S139C",3
"lib2","SARS-CoV-2","CATAGGTCCGCGGCTA",1,48.2,10.67,-0.16,0.08,2.73,1.23,0,">1 nonsynonymous","T63K D97T",2
"lib2","SARS-CoV-2","CATAGGTCTGCACAGG",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92F D98L V103M A105T P133F H189K",6
"lib2","SARS-CoV-2","CATAGGTGCCCCCCCA",3,82.44,10.78,-0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATAGGTTCCTAAGAA",4,51.45,10.63,-0.2,0.03,2.96,1.05,0,">1 nonsynonymous","V32S P54S",2
"lib2","SARS-CoV-2","CATAGGTTTGGACTCT",4,4.68,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","CATAGTAACGCAAAGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M S43N T100P G146S G152S G166Q",6
"lib2","SARS-CoV-2","CATAGTAACTATGTAC",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F C150G S164Q",3
"lib2","SARS-CoV-2","CATAGTAAGACGGGCT",6,76.09,6,-4.84,1.36,1.5,1.13,0.02,">1 nonsynonymous","Q144G C158G",2
"lib2","SARS-CoV-2","CATAGTAAGCGACCGA",4,9.11,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","V65W K87R G116V E135S S164N",5
"lib2","SARS-CoV-2","CATAGTACACTGATCA",1,15.5,10.43,-0.41,0.13,2.1,1.08,0.01,"1 nonsynonymous","K94G",1
"lib2","SARS-CoV-2","CATAGTACCACCGCCC",9,212.76,9.3,-1.53,0.08,2.77,1.07,0,">1 nonsynonymous","C6K K87N",2
"lib2","SARS-CoV-2","CATAGTACGTTAAGGT",3,5.19,6,-4.84,2,3,1.26,0.06,">1 nonsynonymous","A14N T85G A89V G101M G117S S139T R179M",7
"lib2","SARS-CoV-2","CATAGTCAAACACTAT",3,28.63,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F8S Q84Y Y93W F160S",4
"lib2","SARS-CoV-2","CATAGTCATCTCGATA",3,47.26,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12H G101D",2
"lib2","SARS-CoV-2","CATAGTCGAACGTAAG",10,114.93,6.6,-4.24,0.44,1.5,1.14,0.02,">1 nonsynonymous","Y91T L111Q I138P",3
"lib2","SARS-CoV-2","CATAGTGATGCCCACC",2,14.28,10.71,-0.12,0.06,2.99,1.04,0,">1 nonsynonymous","T100H K128L",2
"lib2","SARS-CoV-2","CATAGTGTATCGGATT",8,88.13,6.17,-4.66,0.97,1.5,1.2,0.03,">1 nonsynonymous","N107K Y123T S164T",3
"lib2","SARS-CoV-2","CATAGTTAAACAAATT",8,112.61,6,-4.84,1.53,1.5,1.15,0.01,">1 nonsynonymous","G9R T55S G86L Y121N G146M L162K",6
"lib2","SARS-CoV-2","CATAGTTAAGAAGATA",2,9.64,9.71,-1.12,0.22,1.96,1,0.01,">1 nonsynonymous","E10K L57E T100S",3
"lib2","SARS-CoV-2","CATAGTTAGAACATGT",9,85.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6R F17D K26C E154K",4
"lib2","SARS-CoV-2","CATAGTTGGATCACAC",6,5.84,NA,NA,NA,NA,NA,NA,"stop","N4L W23E V65Q G155N Y178*",5
"lib2","SARS-CoV-2","CATAGTTGTAAGTACA",9,144.53,10.84,0,0.04,2.91,1.1,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","CATAGTTGTCTCCATG",9,58.57,10.64,-0.2,0.05,2.96,1.07,0,">1 nonsynonymous","T15D F160S",2
"lib2","SARS-CoV-2","CATATAAAACTAGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","S45* G51K G86I F134T P161S",5
"lib2","SARS-CoV-2","CATATAAAATCATACA",7,8.28,10.84,0,0.42,1.5,1,0.07,">1 nonsynonymous","A14V D34M K48Q V77H G83Y A105R",6
"lib2","SARS-CoV-2","CATATAAACCAAACCC",2,54.3,7.93,-2.91,0.27,1.5,1.04,0.03,">1 nonsynonymous","S43A N107I N151S",3
"lib2","SARS-CoV-2","CATATAAACCCACCAG",7,55.85,8.99,-1.84,0.09,2.78,1.12,0,">1 nonsynonymous","A42L N120T",2
"lib2","SARS-CoV-2","CATATAAACCGGTAGA",3,62.77,6,-4.84,1.33,1.5,1.1,0.01,">1 nonsynonymous","K94V N157T P191N",3
"lib2","SARS-CoV-2","CATATAACAATAAAAA",24,214.41,10.88,0.04,0.04,2.98,1.03,0,"1 nonsynonymous","K198Q",1
"lib2","SARS-CoV-2","CATATAACGAGCGGTA",4,1.01,NA,NA,NA,NA,NA,NA,"stop","E10* Y50T",2
"lib2","SARS-CoV-2","CATATAAGGAATACTT",3,0.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","CATATAAGGGTATTAC",1,8.39,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6F A33R S53F T63L S69R D97F N151H",7
"lib2","SARS-CoV-2","CATATAATCAGACGAT",1,19.68,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y39H P96R N110A P149I G174F",5
"lib2","SARS-CoV-2","CATATAATCCACTTTA",6,46.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D59Q K87E N109Y I138P C150S",5
"lib2","SARS-CoV-2","CATATAATTCATTGTA",1,16.69,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F8S D59Y N64Y N107P C158L",5
"lib2","SARS-CoV-2","CATATACAAACAGGCT",10,136.35,10.8,-0.03,0.04,2.94,1.07,0,">1 nonsynonymous","V37I L188Q S200W",3
"lib2","SARS-CoV-2","CATATACAATATTAGT",7,47.2,6,-4.84,1.16,3,1.12,0.01,">1 nonsynonymous","S45L A81F R124M F160H",4
"lib2","SARS-CoV-2","CATATACACAATCTAC",2,82.07,10.63,-0.2,0.03,2.93,1.07,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","CATATACAGGGAAACA",6,113.96,9.74,-1.1,0.06,1.91,1.07,0,">1 nonsynonymous","I28N P149T",2
"lib2","SARS-CoV-2","CATATACAGGGACCAA",2,95.97,9.16,-1.67,0.08,2.5,1.1,0,">1 nonsynonymous","T100L Q176R",2
"lib2","SARS-CoV-2","CATATACAGTGCCATG",6,56.54,10.34,-0.5,0.04,2.87,1.05,0,">1 nonsynonymous","N40W K114L",2
"lib2","SARS-CoV-2","CATATACATAGTCCCG",1,16.69,10.96,0.12,0.12,2.78,1.24,0,">1 nonsynonymous","S29Q L60S L122Q",3
"lib2","SARS-CoV-2","CATATACATGAAGACA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","N1F C6I Y93S G155K V180*",5
"lib2","SARS-CoV-2","CATATACCTCATGCCA",2,8.69,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G83W N118T R179P",3
"lib2","SARS-CoV-2","CATATACCTTAAGCAC",12,275.29,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D34A S36E I88K P177L",4
"lib2","SARS-CoV-2","CATATACGACTAATAT",1,10.63,10.97,0.13,0.11,2.91,1.09,0.01,">1 nonsynonymous","T55L A192L",2
"lib2","SARS-CoV-2","CATATACGCCAACACT",6,168.61,9.55,-1.28,0.06,2.51,1.05,0,">1 nonsynonymous","T85H L122T P161C",3
"lib2","SARS-CoV-2","CATATACTAGCAAATC",1,6.95,10.68,-0.15,0.22,2.77,1.16,0.01,">1 nonsynonymous","L57I L122E",2
"lib2","SARS-CoV-2","CATATACTCAAACCCA",3,73.91,7.9,-2.93,0.14,1.63,1.07,0.01,">1 nonsynonymous","T63M G117A P133S Y178F",4
"lib2","SARS-CoV-2","CATATACTGGTACTGA",2,13.19,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","I28V N64V C102N H189N",4
"lib2","SARS-CoV-2","CATATACTTAATTCAT",9,7.31,NA,NA,NA,NA,NA,NA,"stop","W23* Y50T I104L T201A",4
"lib2","SARS-CoV-2","CATATAGACAAAGGAT",2,105.84,10.28,-0.55,0.03,2.88,1.09,0,">1 nonsynonymous","E76W F160N",2
"lib2","SARS-CoV-2","CATATAGTTTAGGAGT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N40Y S147*",2
"lib2","SARS-CoV-2","CATATATAACACCTTA",10,30.21,8.21,-2.62,0.22,1.5,1.18,0.02,">1 nonsynonymous","S41V P133Q E141C",3
"lib2","SARS-CoV-2","CATATATAATCAGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42* T140Y G172R",3
"lib2","SARS-CoV-2","CATATATACCTAAAGG",2,11.73,9.31,-1.53,0.28,1.95,1.03,0.04,">1 nonsynonymous","S69K V115F",2
"lib2","SARS-CoV-2","CATATATAGTTATCTT",8,80.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38P S69G I80T",3
"lib2","SARS-CoV-2","CATATATCAACGGGGA",3,15.39,10.77,-0.07,0.11,2.89,1.03,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","CATATATCATTTACCT",10,88.04,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y66A L95H W106R S139R",4
"lib2","SARS-CoV-2","CATATATCGGCCTGAG",2,7.25,9.95,-0.88,0.12,2.96,1,0,">1 nonsynonymous","F44I N118Q N130H",3
"lib2","SARS-CoV-2","CATATATCTCTTCTCA",5,78.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L60D D112S",2
"lib2","SARS-CoV-2","CATATATCTGCATTCG",9,96.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9L V32R Y91I S139D F167M G174W T201F",7
"lib2","SARS-CoV-2","CATATATCTTCATAAT",6,0,NA,NA,NA,NA,NA,NA,"stop","G101* V173Y",2
"lib2","SARS-CoV-2","CATATATGAATTGCAA",1,23.58,10.01,-0.83,0.08,2.99,1,0,"1 nonsynonymous","N107Q",1
"lib2","SARS-CoV-2","CATATATGTACGGCAG",13,82.52,7.32,-3.52,0.15,1.5,1.16,0.01,">1 nonsynonymous","Q168P K198Q",2
"lib2","SARS-CoV-2","CATATATGTTTAACAG",2,15.75,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D59P I72R G83L V103H P149R",5
"lib2","SARS-CoV-2","CATATATTAATTGAAA",10,136.44,10.8,-0.03,0.04,2.94,1.08,0,">1 nonsynonymous","I2L S43V",2
"lib2","SARS-CoV-2","CATATCAAACACGGGG",10,2.18,NA,NA,NA,NA,NA,NA,"stop","T46I D90F N107A E141*",4
"lib2","SARS-CoV-2","CATATCAAACTTGAAT",3,16.77,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","A81V K87P T100P",3
"lib2","SARS-CoV-2","CATATCAACCCAAAAA",9,55.77,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","K48C T100S K114V G117C Q144H F160R",6
"lib2","SARS-CoV-2","CATATCAATCAATAGT",7,44.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40A C49G",2
"lib2","SARS-CoV-2","CATATCAATCCATGTA",2,31.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46L G86C D90L G146S G155Y",5
"lib2","SARS-CoV-2","CATATCACTTATATAT",3,27.48,8.35,-2.49,0.09,1.81,1.15,0,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","CATATCACTTTACGTA",2,16.68,8.63,-2.21,0.11,2.87,1.06,0.01,">1 nonsynonymous","N120S L125R I138K G155S",4
"lib2","SARS-CoV-2","CATATCAGACTTCCAA",5,37.91,10.82,-0.02,0.08,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CATATCAGGTGTAAAA",14,80.86,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5D N92K K114M F167G",4
"lib2","SARS-CoV-2","CATATCCAATTAAAGC",6,29.11,10.22,-0.62,0.07,2.84,1,0,"1 nonsynonymous","P133K",1
"lib2","SARS-CoV-2","CATATCCCTTTGACTT",2,53.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11D V37Q N92L W106L K114W R127C",6
"lib2","SARS-CoV-2","CATATCCCTTTGAGTG",3,50.37,10.2,-0.64,0.08,2.55,1.05,0,">1 nonsynonymous","Y91F F99M",2
"lib2","SARS-CoV-2","CATATCCGCCTCTAAC",6,27.84,10.11,-0.72,0.1,2.48,1.06,0.01,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","CATATCCTAATGTGAG",1,8.78,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","G86S G172S",2
"lib2","SARS-CoV-2","CATATCCTACAAACAA",6,80.5,9.79,-1.05,0.05,2.18,1.06,0,"1 nonsynonymous","A105H",1
"lib2","SARS-CoV-2","CATATCCTACCCATAT",1,30.92,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A145N L162Q T201S",3
"lib2","SARS-CoV-2","CATATCCTCGAGGGGA",2,9.38,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","D90H Y119M G166Q L183N",4
"lib2","SARS-CoV-2","CATATCCTCTTGACAA",7,52.12,7.04,-3.8,0.22,1.5,1.11,0.01,">1 nonsynonymous","Y91S N120P",2
"lib2","SARS-CoV-2","CATATCGAAAGCTTGG",3,4.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","CATATCGAAGAAGACC",1,16.77,10.21,-0.63,0.16,2.41,1.1,0.01,">1 nonsynonymous","D97G V103I E186H",3
"lib2","SARS-CoV-2","CATATCGACTTTAGAC",1,10.06,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S41M Y91A F99K A105Q",4
"lib2","SARS-CoV-2","CATATCGAGGACTCTC",16,11.2,NA,NA,NA,NA,NA,NA,"stop","K26N R27S A105N E141* T170L",5
"lib2","SARS-CoV-2","CATATCGCACAGCATG",1,14.16,9.54,-1.29,0.14,2.67,1.02,0.01,">1 nonsynonymous","F44S D98P L122T L188R P197E",5
"lib2","SARS-CoV-2","CATATCGCCTTAAGGA",3,62.84,10.67,-0.16,0.02,2.97,1.03,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","CATATCGCGTTGATTG",5,79.04,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","N30L S41H D97V D98H A105K H189D T201M",7
"lib2","SARS-CoV-2","CATATCGTCATCAAAA",19,324.31,10.65,-0.19,0.03,2.86,1.1,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","CATATCTAATGGAAAT",3,59.67,10.7,-0.13,0.04,3,1.04,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","CATATCTATCGCGATA",12,47.67,7.04,-3.79,0.43,1.5,1.15,0.02,">1 nonsynonymous","E10G A42C A89H E141A",4
"lib2","SARS-CoV-2","CATATCTCAGCTGCCT",18,140.48,6.2,-4.63,0.53,1.5,1.15,0.01,">1 nonsynonymous","T63G Q84L Y165V K199C",4
"lib2","SARS-CoV-2","CATATCTCCTAGTCTA",4,140.42,10.7,-0.13,0.05,2.93,1.09,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","CATATCTTAAAGAATA",3,14.46,10.13,-0.71,0.07,2.99,1,0,">1 nonsynonymous","T55S P161A T170S H189D",4
"lib2","SARS-CoV-2","CATATCTTAACCGAAT",18,106.9,6.14,-4.69,0.6,1.5,1.16,0.01,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","CATATCTTTAAAACAT",3,22.3,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35N I80R D90W Y159S",4
"lib2","SARS-CoV-2","CATATGAAATGACGTA",4,41.91,10.53,-0.31,0.07,2.9,1.05,0,"1 nonsynonymous","F44E",1
"lib2","SARS-CoV-2","CATATGAAGTTATCGT",3,135.16,10.77,-0.06,0.04,2.93,1.09,0,">1 nonsynonymous","N1A K128R T148S",3
"lib2","SARS-CoV-2","CATATGAATCAGTACG",1,61.4,10.86,0.02,0.05,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CATATGACATGCGACG",7,99.96,8.69,-2.14,0.06,2.77,1.03,0,">1 nonsynonymous","E10H Y39R S139G N157D",4
"lib2","SARS-CoV-2","CATATGACCAACTAGT",4,37.01,8.8,-2.03,0.11,1.8,1.11,0.01,">1 nonsynonymous","C61E V103A",2
"lib2","SARS-CoV-2","CATATGAGACTTGACC",2,9.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P96A T100P",2
"lib2","SARS-CoV-2","CATATGAGTGCCGTTA",7,80.45,8.56,-2.28,0.08,2.62,1.03,0,">1 nonsynonymous","S43N C61S N107V",3
"lib2","SARS-CoV-2","CATATGATACGCCCTC",2,8.63,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10R S43L N92T S113A L122K",5
"lib2","SARS-CoV-2","CATATGATAGTTCAAA",7,73.95,10.58,-0.26,0.05,2.84,1.14,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","CATATGATCATTACTT",6,59.7,10.79,-0.05,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CATATGCAATACCGTC",27,99.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L T85K I104P Y143F",4
"lib2","SARS-CoV-2","CATATGCCTAAATGGT",4,44.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y39T Y50C I104D",3
"lib2","SARS-CoV-2","CATATGCTAAAGAGAG",4,9.14,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F8K F44R C49S K132S T148A",5
"lib2","SARS-CoV-2","CATATGCTGAATGCTA",14,192.15,10.7,-0.14,0.03,2.87,1.06,0,">1 nonsynonymous","A42I N64Y",2
"lib2","SARS-CoV-2","CATATGGAGTGTTATT",7,19.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13L P96M N107S",3
"lib2","SARS-CoV-2","CATATGGCATTCTCAC",3,48.12,10.88,0.04,0.07,2.74,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CATATGGTAAAGAAAT",8,15.11,6.06,-4.77,1.22,1.65,1.19,0.02,">1 nonsynonymous","D34I S69F L95E G101D N130S N171V",6
"lib2","SARS-CoV-2","CATATGTATTTATTGT",1,5.37,6,-4.84,2,3,1.03,0,">1 nonsynonymous","F12I L95T Q144M K198Y",4
"lib2","SARS-CoV-2","CATATGTGCGTTGTGG",8,108.08,10.85,0.01,0.13,2.67,1.16,0.01,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","CATATGTTATGGTAGG",2,27.59,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N24C V71E A105S N157M",4
"lib2","SARS-CoV-2","CATATGTTTGAATTCG",5,33.76,10.8,-0.04,0.05,2.96,1.07,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","CATATTAAAAGTCGAG",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M V103F V173P",3
"lib2","SARS-CoV-2","CATATTAAACATAATC",9,147.67,10.21,-0.62,0.05,2.8,1.01,0,">1 nonsynonymous","G9S Y35K T148R T201S",4
"lib2","SARS-CoV-2","CATATTAAAGATCTAC",4,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90M F99A I104N",3
"lib2","SARS-CoV-2","CATATTAAATAGTACC",2,0.67,NA,NA,NA,NA,NA,NA,"stop","D90* R127T C150V V173S",4
"lib2","SARS-CoV-2","CATATTAAGAATCCAG",4,79.21,7.19,-3.64,0.26,1.5,1.16,0.01,">1 nonsynonymous","L5N V32L S41L G166P",4
"lib2","SARS-CoV-2","CATATTAATAAGATAG",14,241.75,10.07,-0.77,0.04,2.96,1.02,0,">1 nonsynonymous","L5C Y119R",2
"lib2","SARS-CoV-2","CATATTAATGTCCAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","R78L K87N D98L A105N S129*",5
"lib2","SARS-CoV-2","CATATTAATTATGAAA",3,43.76,8.64,-2.2,0.11,2.21,1.08,0,">1 nonsynonymous","I2A T15N D59V N118D",4
"lib2","SARS-CoV-2","CATATTACCTCACGAA",4,51.22,10.78,-0.06,0.11,2.83,1.18,0.01,"1 nonsynonymous","Y39R",1
"lib2","SARS-CoV-2","CATATTACTATTCATA",2,75.35,9.78,-1.06,0.11,2.55,1,0,">1 nonsynonymous","R78Y P161E",2
"lib2","SARS-CoV-2","CATATTAGCCGCAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q T100V",2
"lib2","SARS-CoV-2","CATATTATACAAAGGT",13,142.25,10.11,-0.73,0.03,2.84,1.02,0,">1 nonsynonymous","C6T S41F",2
"lib2","SARS-CoV-2","CATATTATAGAATCTA",6,84.14,10.56,-0.27,0.05,2.85,1.08,0,"1 nonsynonymous","D34N",1
"lib2","SARS-CoV-2","CATATTATCAATTTAA",20,89.33,6,-4.84,2,2.35,1.16,0,">1 nonsynonymous","C49I T55H V103M S108L",4
"lib2","SARS-CoV-2","CATATTATTAAACCGC",6,15.96,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","N1V C61K V77M Y93S N120Q",5
"lib2","SARS-CoV-2","CATATTCAGCCGCCTT",3,18.81,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N92E R124P",2
"lib2","SARS-CoV-2","CATATTCCCATGATTA",3,45.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N64I Y93S P149R",3
"lib2","SARS-CoV-2","CATATTCCGGTGCTAA",10,76.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T15I N92W D112S L122N Y143R",5
"lib2","SARS-CoV-2","CATATTCGAGTAAACA",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L F44D G86S Y143K V173P",5
"lib2","SARS-CoV-2","CATATTGAACAGCCAT",2,28.84,9.37,-1.46,0.08,2.97,1.04,0,">1 nonsynonymous","L5S D90R Y119S",3
"lib2","SARS-CoV-2","CATATTGAACCAAGAG",2,8.06,6,-4.84,1.42,3,1.05,0.01,">1 nonsynonymous","I2A N120W F167T",3
"lib2","SARS-CoV-2","CATATTGATTAGAGCA",2,53.12,10.48,-0.35,0.03,2.94,1.06,0,">1 nonsynonymous","S41T P149V C195T K199M",4
"lib2","SARS-CoV-2","CATATTGCAATAATTT",23,29.04,6.71,-4.13,0.47,1.98,1.42,0.04,">1 nonsynonymous","T55N I104N V173M Y178N S184D",5
"lib2","SARS-CoV-2","CATATTGCCATAGTTC",10,0.94,NA,NA,NA,NA,NA,NA,"stop","K128* T170K",2
"lib2","SARS-CoV-2","CATATTGCGTGAGCAA",6,74.46,7.42,-3.41,0.33,1.5,1.13,0.03,">1 nonsynonymous","V52S N58F A81V",3
"lib2","SARS-CoV-2","CATATTGGCAACGGAC",10,85.72,10.81,-0.03,0.05,2.97,1.06,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","CATATTTAACCTGATC",1,17.06,6,-4.84,2,1.5,1.08,0.06,">1 nonsynonymous","R25S I88V A105D K128M G174E",5
"lib2","SARS-CoV-2","CATATTTAGAATATTA",5,23.34,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G101S E154F",2
"lib2","SARS-CoV-2","CATATTTATACAAACA",8,89.49,10.63,-0.2,0.06,2.9,1.07,0,">1 nonsynonymous","I2K D98V",2
"lib2","SARS-CoV-2","CATATTTATTAACCCC",2,30.75,10.82,-0.01,0.04,3,1.01,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","CATATTTGCATAAATG",6,125.33,9.96,-0.88,0.05,2.64,1.03,0,">1 nonsynonymous","V37S N107S P149H",3
"lib2","SARS-CoV-2","CATATTTTGCAGCAAC",3,98.1,8.44,-2.4,0.12,2.42,1.04,0.01,">1 nonsynonymous","P96A G117M",2
"lib2","SARS-CoV-2","CATATTTTTTAAAACA",13,51.14,6,-4.84,2,1.5,1.43,0.06,">1 nonsynonymous","C49M C61A Y66D G86K N107T",5
"lib2","SARS-CoV-2","CATCAAAAATAACAGG",3,43.36,10.82,-0.02,0.07,2.9,1.12,0,"1 nonsynonymous","C61H",1
"lib2","SARS-CoV-2","CATCAAAACAAGCGGA",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G V103H",2
"lib2","SARS-CoV-2","CATCAAACAGATAATC",8,1.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7A",1
"lib2","SARS-CoV-2","CATCAAAGCAAAAACA",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7C D90G Y119K",3
"lib2","SARS-CoV-2","CATCAAAGCTAAAGCG",1,19.23,10.64,-0.19,0.08,2.95,1,0,">1 nonsynonymous","S41K Y66I",2
"lib2","SARS-CoV-2","CATCAAAGTCAGATGT",2,25.66,10.84,0.01,0.1,2.81,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCAAAGTTAACGGG",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55C F70T G155V",3
"lib2","SARS-CoV-2","CATCAAATACACCGGA",9,74.66,8.69,-2.15,0.15,1.58,1.15,0.01,">1 nonsynonymous","Y35H N107R",2
"lib2","SARS-CoV-2","CATCAAATAGATCAGG",1,35.13,10.74,-0.1,0.03,3,1,0,"1 nonsynonymous","Y123W",1
"lib2","SARS-CoV-2","CATCAAATGTGCTATT",6,98.45,10.44,-0.4,0.04,2.97,1.05,0,"1 nonsynonymous","K87W",1
"lib2","SARS-CoV-2","CATCAACAAGTGGAGT",5,4.52,NA,NA,NA,NA,NA,NA,"stop","G9* F62Y N120T P149* F156P L162R",6
"lib2","SARS-CoV-2","CATCAACAGAATGTCA",20,110.87,6,-4.84,2,3,1.24,0,">1 nonsynonymous","I72S V180C",2
"lib2","SARS-CoV-2","CATCAACCTCAGATCA",5,30.75,10.85,0.02,0.13,2.89,1.02,0,">1 nonsynonymous","N1M S43D",2
"lib2","SARS-CoV-2","CATCAACGCATAACAA",1,5.49,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G9K S41P Q79T P82V G116K R136L",6
"lib2","SARS-CoV-2","CATCAACGGTATCGCA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","CATCAACTATTATGGA",3,15.95,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","T3H G86M F160P",3
"lib2","SARS-CoV-2","CATCAACTCTCAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F47Y G86* Y175C T201I",4
"lib2","SARS-CoV-2","CATCAACTTAGGCTCG",7,47.97,6,-4.84,2,1.5,1.29,0.01,">1 nonsynonymous","C6A L60W P169M P177Q",4
"lib2","SARS-CoV-2","CATCAAGAATCGAATT",10,66.21,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T3N V77M Y121A I138G",4
"lib2","SARS-CoV-2","CATCAAGACACACACC",6,1.89,NA,NA,NA,NA,NA,NA,"stop","S19* A33I G51R L60* T140I T148V N157M",7
"lib2","SARS-CoV-2","CATCAAGAGCTACATC",3,0.84,NA,NA,NA,NA,NA,NA,"stop","L122* Y143T S147M",3
"lib2","SARS-CoV-2","CATCAAGATATTACGT",1,28.6,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","I2L E10A F70R P96L",4
"lib2","SARS-CoV-2","CATCAAGATGAAATAG",2,24.75,8.4,-2.43,0.17,1.67,1.07,0.01,">1 nonsynonymous","P7M D75K S129N G152F P169S",5
"lib2","SARS-CoV-2","CATCAAGATGGCAACT",5,41.48,10.16,-0.67,0.06,2.84,1.11,0,"1 nonsynonymous","Q144W",1
"lib2","SARS-CoV-2","CATCAAGCAAATGTAA",20,99.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49L D97S R127K",3
"lib2","SARS-CoV-2","CATCAAGCACCCCACG",18,205.9,9.14,-1.69,0.06,1.77,1.1,0,">1 nonsynonymous","F17E A33P Y39W K48R",4
"lib2","SARS-CoV-2","CATCAAGCATTCGCTT",3,67.45,10.73,-0.11,0.06,2.89,1.12,0,">1 nonsynonymous","T100S S200V",2
"lib2","SARS-CoV-2","CATCAAGCCCAATACT",9,62.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50K P149M C150Y N157P T201V",5
"lib2","SARS-CoV-2","CATCAAGCTAAAGAAG",1,11.93,8.41,-2.43,0.19,2.3,1.17,0.01,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","CATCAAGGAAAATCCT",8,62.68,8.09,-2.75,0.11,1.65,1.08,0,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CATCAAGGACGATTTC",7,77.91,7.87,-2.97,0.15,1.5,1.12,0.01,">1 nonsynonymous","E10K Y91E S200K",3
"lib2","SARS-CoV-2","CATCAATATGAAGAAA",2,80.26,10.21,-0.62,0.04,2.95,1.02,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","CATCAATATGTCCCAA",8,151.83,10.8,-0.03,0.03,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CATCAATCACATTCCC",14,147.71,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D68L I88Q K128V E141V Q163Y",5
"lib2","SARS-CoV-2","CATCAATGGCTTAACA",10,78.76,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P82T D90F G117Y F126R P149F G155K T201S",7
"lib2","SARS-CoV-2","CATCAATTAATGAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R Q168D",2
"lib2","SARS-CoV-2","CATCAATTCGGCAATC",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93R F99L L131F Y159C",4
"lib2","SARS-CoV-2","CATCAATTGGCACTGT",1,11.02,7.06,-3.78,0.36,1.5,1.19,0.02,">1 nonsynonymous","L60V Y165P",2
"lib2","SARS-CoV-2","CATCAATTGGCAGCCT",5,46.25,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N24T K94I Y119C E141P F156Y",5
"lib2","SARS-CoV-2","CATCACAACAACACAG",2,67.18,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V32E F44S K56F C102R Y123G Q168L",6
"lib2","SARS-CoV-2","CATCACAATCGCCTTT",8,143.13,10.88,0.04,0.06,2.84,1.13,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","CATCACATAAATAAGC",2,32.41,9.38,-1.45,0.18,1.83,1,0.01,">1 nonsynonymous","E76T P133W",2
"lib2","SARS-CoV-2","CATCACATATAGCGAA",6,111.54,9.81,-1.02,0.05,2.9,1.06,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","CATCACATGGGCCAAT",1,72.36,9.68,-1.16,0.16,2.59,1.24,0.01,"1 nonsynonymous","A145N",1
"lib2","SARS-CoV-2","CATCACATTTGATACT",2,13.26,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S19I Q168R",2
"lib2","SARS-CoV-2","CATCACCACAAATTGA",8,4.67,NA,NA,NA,NA,NA,NA,"stop","F70* P133K",2
"lib2","SARS-CoV-2","CATCACCGTCTGATCC",3,41.53,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28M Y93N C102Y P197R",4
"lib2","SARS-CoV-2","CATCACCGTGATGCCA",2,27.2,8.52,-2.32,0.11,1.96,1.07,0.01,">1 nonsynonymous","Q84W N120V G166V",3
"lib2","SARS-CoV-2","CATCACCTAATACTTT",3,58,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S45P G83I A105C H189F",4
"lib2","SARS-CoV-2","CATCACGAACCCGATT",2,50.17,10.74,-0.1,0.06,3,1.01,0,">1 nonsynonymous","G9T K114V",2
"lib2","SARS-CoV-2","CATCACGGACGTGGAA",14,182.78,10.86,0.02,0.05,2.96,1.05,0,"1 nonsynonymous","T46L",1
"lib2","SARS-CoV-2","CATCACTAATGATTTG",3,0.69,NA,NA,NA,NA,NA,NA,"stop","N1C Y35T I88V D98* G101S",5
"lib2","SARS-CoV-2","CATCACTACACTTACG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","L60F D112*",2
"lib2","SARS-CoV-2","CATCACTACCGAGGAT",3,28.2,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","E10G K56N D68R R179W",4
"lib2","SARS-CoV-2","CATCACTACGATTTTT",5,30.2,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86D P96Y",2
"lib2","SARS-CoV-2","CATCACTCAATTATCA",2,53.74,10.07,-0.76,0.05,2.85,1.06,0,">1 nonsynonymous","F134N S147H S164G",3
"lib2","SARS-CoV-2","CATCACTGATTGCACC",1,17.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3R N118I G174V",3
"lib2","SARS-CoV-2","CATCACTGTAACCACT",12,49.29,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I2K T46F C102S",3
"lib2","SARS-CoV-2","CATCACTTGTACAATA",7,25.71,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V32C K94C N107D I138V N171Y V182F",6
"lib2","SARS-CoV-2","CATCAGAACCCACATG",15,283.8,10.81,-0.02,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCAGAACCGACCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2C C31N V37* G86F",4
"lib2","SARS-CoV-2","CATCAGAATACACGAA",5,102.21,10.75,-0.08,0.04,2.97,1.03,0,"1 nonsynonymous","C195T",1
"lib2","SARS-CoV-2","CATCAGACCAAACCAT",1,5.91,6,-4.84,2,1.5,1.02,0.02,">1 nonsynonymous","S139I L162V Y175P",3
"lib2","SARS-CoV-2","CATCAGACCGACGACC",3,12.63,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","Y35R D97H I104M G146L L183M",5
"lib2","SARS-CoV-2","CATCAGACCGGACCTG",13,289.44,9.29,-1.55,0.03,2.87,1.11,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","CATCAGAGGTACCTAC",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K I104H N157C R179F",4
"lib2","SARS-CoV-2","CATCAGATATAGGTGC",7,118,10.32,-0.52,0.05,2.96,1,0,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","CATCAGATATGCCAGA",5,22.58,9.2,-1.64,0.15,1.77,1.1,0.01,">1 nonsynonymous","N1R F44L N107R",3
"lib2","SARS-CoV-2","CATCAGATGAAATCCT",2,17.06,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","L95N T201L",2
"lib2","SARS-CoV-2","CATCAGCAAAAGTGAG",14,3.98,NA,NA,NA,NA,NA,NA,"stop","Y35* S45D F99H N107V V173I T201K",6
"lib2","SARS-CoV-2","CATCAGCAATACTATT",13,80.95,10.91,0.07,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCAGCACTAGCAAC",2,0.25,NA,NA,NA,NA,NA,NA,"stop","V20A I104* G146E P161L F185M",5
"lib2","SARS-CoV-2","CATCAGCGATGGTTAG",9,41.5,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","CATCAGCTATCCGCGA",6,58.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2H L38T Q84P Y123T",4
"lib2","SARS-CoV-2","CATCAGGTAAAGTCTT",1,17.23,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","V103K N120I G152S Q176M",4
"lib2","SARS-CoV-2","CATCAGTAAGTAGAAA",1,45.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T P54I Y123F K128R",4
"lib2","SARS-CoV-2","CATCAGTATAAGGAAA",4,79.86,10.32,-0.52,0.04,2.88,1.03,0,">1 nonsynonymous","N64I T85F",2
"lib2","SARS-CoV-2","CATCAGTCTAACCAAC",1,35.97,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G83L G146L Y175I P197Q",4
"lib2","SARS-CoV-2","CATCATAAAGAAGCGG",3,36.61,9.82,-1.02,0.07,2.85,1.06,0,">1 nonsynonymous","C6G L60T K132S",3
"lib2","SARS-CoV-2","CATCATAATACATACC",8,0,NA,NA,NA,NA,NA,NA,"stop","V11S T55E V115* G166S",4
"lib2","SARS-CoV-2","CATCATAATATTACTA",7,141.82,10.76,-0.08,0.03,2.98,1.05,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","CATCATACATCAGAAC",7,92.14,9.65,-1.18,0.05,1.82,1.09,0,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","CATCATACCCACCAAG",10,181.69,10.33,-0.51,0.02,2.88,1.07,0,">1 nonsynonymous","N4E C61G K128P S184Y",4
"lib2","SARS-CoV-2","CATCATACTCCGAAAA",3,13.31,10.42,-0.41,0.08,2.96,1.04,0.01,">1 nonsynonymous","G9V L60T",2
"lib2","SARS-CoV-2","CATCATACTTACATGA",1,21.68,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A89C F99T V181L",3
"lib2","SARS-CoV-2","CATCATAGAGTTTGGT",5,33.14,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","C6F L95H",2
"lib2","SARS-CoV-2","CATCATAGCGTAATCT",2,8.52,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","A18E V37Y G83D P96Q V103G",5
"lib2","SARS-CoV-2","CATCATATACGCTATC",2,31.21,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T15V R25S S113T",3
"lib2","SARS-CoV-2","CATCATATCCTCGTCG",2,11.3,8.99,-1.85,0.24,1.5,1,0.02,">1 nonsynonymous","D59G A105N",2
"lib2","SARS-CoV-2","CATCATATTAGGACCA",3,76.81,9.71,-1.13,0.05,2.92,1.08,0,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","CATCATCAGACTATAA",4,56.46,10.85,0.01,0.06,2.92,1.07,0,">1 nonsynonymous","I28L G146S",2
"lib2","SARS-CoV-2","CATCATCCCGAACCAA",8,17.65,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N13C F47S D98G W106E F134L",5
"lib2","SARS-CoV-2","CATCATCCTAATACAA",2,23.79,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T15L Y35R F44Y G146S L162K T201V",6
"lib2","SARS-CoV-2","CATCATCTATAGGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* V20S N40D",3
"lib2","SARS-CoV-2","CATCATCTTTGAGTCT",2,1.81,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","CATCATGACGTCGTCA",8,0.21,NA,NA,NA,NA,NA,NA,"stop","S43* C61R D98H V103I P161T G172M",6
"lib2","SARS-CoV-2","CATCATGATAATTATT",3,101.97,10.79,-0.04,0.04,2.98,1.03,0,"1 nonsynonymous","T15S",1
"lib2","SARS-CoV-2","CATCATGTATACTAAC",3,146.21,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N4I N120P R124C",3
"lib2","SARS-CoV-2","CATCATGTTAAATCCA",1,0.04,NA,NA,NA,NA,NA,NA,"stop","T85* K94T G117L T201M",4
"lib2","SARS-CoV-2","CATCATTCGGTCAACT",6,59.43,6,-4.84,2,3,1.21,0,">1 nonsynonymous","Y91T G101Y G155F",3
"lib2","SARS-CoV-2","CATCATTGTGAGCGTA",1,20.33,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","D34R N92M P149D",3
"lib2","SARS-CoV-2","CATCATTGTTATGTAG",2,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S19K G83S K198N",4
"lib2","SARS-CoV-2","CATCATTTTAATTCAG",14,25.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15V V20M L95S",3
"lib2","SARS-CoV-2","CATCATTTTTTAATCA",11,134.57,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y35P A89R K132T",3
"lib2","SARS-CoV-2","CATCCAAAAAACGTAG",16,102.7,8.6,-2.24,0.26,1.5,1,0.03,">1 nonsynonymous","L60H A89Y N151L",3
"lib2","SARS-CoV-2","CATCCAAAAGTTAAGC",1,33.2,10.86,0.02,0.1,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCCAAAATAAATAG",1,21.29,10.4,-0.44,0.09,2.53,1.43,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","CATCCAAACTTTTTAC",3,4.89,NA,NA,NA,NA,NA,NA,"stop","F62* W106R Y123W",3
"lib2","SARS-CoV-2","CATCCAAAGCCAGGCA",4,82.98,8.75,-2.09,0.07,2.75,1.04,0,">1 nonsynonymous","D34F Q168E",2
"lib2","SARS-CoV-2","CATCCAAAGCGAAAGC",2,15.06,9.91,-0.92,0.11,2.7,1.12,0.01,">1 nonsynonymous","A33Q Y178S",2
"lib2","SARS-CoV-2","CATCCAAAGGTCTAGT",10,216.83,10.48,-0.36,0.04,2.93,1.06,0,"1 nonsynonymous","N30T",1
"lib2","SARS-CoV-2","CATCCAAAGTTACAGT",7,9.27,NA,NA,NA,NA,NA,NA,"stop","L95* I142S",2
"lib2","SARS-CoV-2","CATCCAAAGTTACGAG",2,19.75,6.33,-4.5,0.83,1.5,1.29,0.05,">1 nonsynonymous","L131S T148P K198H",3
"lib2","SARS-CoV-2","CATCCAACACACAAAC",5,123.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38Q N157Y Q176A",3
"lib2","SARS-CoV-2","CATCCAACCATACACT",3,49.09,10.01,-0.83,0.06,2.74,1.11,0,">1 nonsynonymous","S43Y Y121S",2
"lib2","SARS-CoV-2","CATCCAACTAGGGCTT",2,30.67,10.81,-0.02,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCCAACTTGACTTC",1,13.35,6.24,-4.59,0.83,1.5,1.2,0.04,">1 nonsynonymous","F44D K48S Y119P S129P G172C",5
"lib2","SARS-CoV-2","CATCCAAGCTAGAGTA",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N13L A42H S69L D98S W106S F134S T201S",8
"lib2","SARS-CoV-2","CATCCAATGGCATAAC",7,87.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F17P I80F N118P Y175S",4
"lib2","SARS-CoV-2","CATCCACAAAAACGCA",11,4.61,NA,NA,NA,NA,NA,NA,"stop","A14P N107*",2
"lib2","SARS-CoV-2","CATCCACCAAACAATT",8,112.1,10.75,-0.08,0.03,2.96,1.05,0,">1 nonsynonymous","S36K S43G",2
"lib2","SARS-CoV-2","CATCCACCTAATAATC",14,118.3,7.72,-3.11,0.15,1.5,1.08,0.01,">1 nonsynonymous","L57M F167L",2
"lib2","SARS-CoV-2","CATCCACCTTTACTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","V37D V77* N120C Q168K P197S",5
"lib2","SARS-CoV-2","CATCCAGAGTCACCTA",2,28.29,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T85F V103C",2
"lib2","SARS-CoV-2","CATCCAGCAATAGAAC",3,82.74,8.41,-2.42,0.25,1.58,1.11,0.02,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","CATCCAGGAACTTAAA",1,9.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61P S113L Y143Q",3
"lib2","SARS-CoV-2","CATCCAGTTAGGTTGA",9,37.7,8.43,-2.41,0.32,1.5,1.04,0.03,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","CATCCATACTGCTAAA",2,41.62,10.29,-0.55,0.07,2.78,1.08,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","CATCCATATATAAACC",1,39.56,10.86,0.03,0.06,2.93,1.08,0,"1 nonsynonymous","N110T",1
"lib2","SARS-CoV-2","CATCCATTAGGAGGGC",2,25.69,10.99,0.15,0.07,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCCATTTAAAACTC",2,13.79,6.02,-4.82,1.39,1.5,1.09,0.04,">1 nonsynonymous","I2V I88G",2
"lib2","SARS-CoV-2","CATCCCAAATTCATCG",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y21S L162*",2
"lib2","SARS-CoV-2","CATCCCAAGCAGGTAG",5,189.47,8.33,-2.51,0.11,2.74,1.09,0,">1 nonsynonymous","D90N Y175S",2
"lib2","SARS-CoV-2","CATCCCACCATATGGG",9,231.99,6.13,-4.71,0.37,1.5,1.14,0,">1 nonsynonymous","I72S A145S",2
"lib2","SARS-CoV-2","CATCCCACGTAAATAA",3,55.72,10.03,-0.81,0.08,2.39,1.04,0,"1 nonsynonymous","Q84W",1
"lib2","SARS-CoV-2","CATCCCATAATAGCCT",2,41.15,6.48,-4.36,0.54,1.5,1.2,0.04,">1 nonsynonymous","F8I S19W A89D D98F L125W",5
"lib2","SARS-CoV-2","CATCCCCCGCATCCGA",11,181.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5E L131S Y143G V153T Y178L T201M",6
"lib2","SARS-CoV-2","CATCCCCGAATAACGT",9,106.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S41K Y119S T140D F167D",4
"lib2","SARS-CoV-2","CATCCCCTATCCAAAG",3,13.11,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","A33D F167C",2
"lib2","SARS-CoV-2","CATCCCCTTTATATCA",4,26.62,6.15,-4.68,0.71,1.5,1.1,0.02,">1 nonsynonymous","L5V E10V G86L",3
"lib2","SARS-CoV-2","CATCCCGTTGACTTCA",2,11.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G101N Q144K",2
"lib2","SARS-CoV-2","CATCCCTAAACAGAAG",3,51.75,8.37,-2.47,0.16,1.5,1.06,0.01,">1 nonsynonymous","A89V Y119P S147Y G174S K199F",5
"lib2","SARS-CoV-2","CATCCCTCGAATACGG",1,29.32,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","N13P R25L F99Y",3
"lib2","SARS-CoV-2","CATCCCTGAATAAACT",2,44.81,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","N109K C158Y",2
"lib2","SARS-CoV-2","CATCCCTGTAACGATA",2,13.59,9.89,-0.95,0.34,1.78,1,0.05,">1 nonsynonymous","P96F T201S",2
"lib2","SARS-CoV-2","CATCCCTTTAACCAAC",6,78.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S29L D59T L162D",3
"lib2","SARS-CoV-2","CATCCGAAGCTTGAAG",12,113.4,7.21,-3.63,0.24,1.5,1.16,0.01,">1 nonsynonymous","Y39S N64H A89H Y119S E141Y A190G",6
"lib2","SARS-CoV-2","CATCCGATCAGGCTAC",11,85.85,9.98,-0.85,0.06,2.29,1.01,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CATCCGATTTGAAAAA",2,17.03,7.42,-3.41,0.34,1.5,1.1,0.03,">1 nonsynonymous","D59L D112V",2
"lib2","SARS-CoV-2","CATCCGCATCAAAAGT",2,0.13,NA,NA,NA,NA,NA,NA,"stop","G155A Y175*",2
"lib2","SARS-CoV-2","CATCCGCGAATAGGTA",1,37.26,10.52,-0.32,0.04,2.94,1.07,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CATCCGGGAATCACCT",9,66.11,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N4T E10L C102Q",3
"lib2","SARS-CoV-2","CATCCGTCCTAGCAAT",2,19.77,8.75,-2.08,0.17,2.04,1.07,0.01,">1 nonsynonymous","L57D I104V P169A",3
"lib2","SARS-CoV-2","CATCCTACAATATTTA",2,9.41,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","I2H N24F W106N T148Y V173A",5
"lib2","SARS-CoV-2","CATCCTACTAAGAAGG",8,104.88,9.1,-1.74,0.06,1.79,1.05,0,">1 nonsynonymous","Y39S G86N",2
"lib2","SARS-CoV-2","CATCCTATAAAGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I88P T201*",2
"lib2","SARS-CoV-2","CATCCTATAATGTATA",4,112.79,8.77,-2.07,0.06,2.94,1.01,0,">1 nonsynonymous","Y123M G166F",2
"lib2","SARS-CoV-2","CATCCTATACCCGCTA",3,40.01,10.04,-0.79,0.08,2.69,1.11,0,">1 nonsynonymous","S45N G116S S184G",3
"lib2","SARS-CoV-2","CATCCTATTAAACCGA",2,39.94,8.46,-2.38,0.15,2.97,1.11,0.01,">1 nonsynonymous","F8I F126I F156Y",3
"lib2","SARS-CoV-2","CATCCTCAACACGGTA",6,215.88,8.72,-2.12,0.07,2.77,1.07,0,">1 nonsynonymous","G83L G117L G146S",3
"lib2","SARS-CoV-2","CATCCTCGAACGTAAC",11,118.57,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Q84N P161G Y178I",3
"lib2","SARS-CoV-2","CATCCTCGACGTACGC",10,116.63,9.85,-0.99,0.05,2.72,1.09,0,">1 nonsynonymous","D59R E141P E154L",3
"lib2","SARS-CoV-2","CATCCTCTGTTGGGTA",6,157.6,10.85,0.01,0.05,2.92,1.09,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","CATCCTGCCACAGGGA",2,6.82,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","P7A L38G K94E I138L",4
"lib2","SARS-CoV-2","CATCCTGCCATATAAC",12,140.87,10.8,-0.03,0.04,2.92,1.09,0,">1 nonsynonymous","P7T V37F T148V",3
"lib2","SARS-CoV-2","CATCCTTAAAGTATCA",12,114.25,10.74,-0.09,0.03,2.89,1.11,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CATCCTTATCCGCCAC",2,15.18,10.25,-0.59,0.12,2.73,1.02,0.01,">1 nonsynonymous","P7L T15G",2
"lib2","SARS-CoV-2","CATCCTTCTCAGCAAC",1,20.77,10.84,0,0.06,2.98,1,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","CATCCTTTACTACTTC",9,188.5,10.76,-0.08,0.04,2.91,1.09,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","CATCGAAAAGGTGCCT",3,17.72,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V37D R127E F156W V182I",4
"lib2","SARS-CoV-2","CATCGAAAATAAATTA",4,86.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35I S113L Y121M",3
"lib2","SARS-CoV-2","CATCGAAACCGGTGAT",6,6.62,NA,NA,NA,NA,NA,NA,"stop","T3W V77N T85W A105K R136* T170*",6
"lib2","SARS-CoV-2","CATCGAAATGAACTAT",11,206.11,10.22,-0.61,0.04,2.83,1.05,0,"1 nonsynonymous","Y121N",1
"lib2","SARS-CoV-2","CATCGAACTTATCTAG",2,20.7,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","E10N I88N Y93F R179G",4
"lib2","SARS-CoV-2","CATCGAAGATTTGTTC",5,1.56,NA,NA,NA,NA,NA,NA,"stop","V37S C49* Q144T",3
"lib2","SARS-CoV-2","CATCGAAGGCCAACTG",5,0.21,NA,NA,NA,NA,NA,NA,"stop","G51I D90* P197C",3
"lib2","SARS-CoV-2","CATCGAATATTAAGCA",1,46,10.83,-0.01,0.05,2.96,1.05,0,"1 nonsynonymous","T140A",1
"lib2","SARS-CoV-2","CATCGAATGATAGTCA",6,59.7,8.64,-2.19,0.16,1.5,1.04,0.01,">1 nonsynonymous","W106G K114L",2
"lib2","SARS-CoV-2","CATCGACTCCCGAAAT",1,40.7,10.36,-0.48,0.05,2.94,1.08,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","CATCGAGCTAATTATG",3,28.41,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C49V V71E",2
"lib2","SARS-CoV-2","CATCGAGGTTATCCTG",12,72.87,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8H S41K R127L T140V S147Y",5
"lib2","SARS-CoV-2","CATCGATGCGGCAACC",7,94.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32L F62I D112N E141V T148G",5
"lib2","SARS-CoV-2","CATCGATTAATAGTAT",5,40.43,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","CATCGATTTATACTCT",3,54.3,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8N G74L A89P A105L",4
"lib2","SARS-CoV-2","CATCGATTTTGGTGAC",8,89.22,10.5,-0.34,0.04,2.9,1.06,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","CATCGCAAAGCTTGCC",1,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I C102I F126A G166P",4
"lib2","SARS-CoV-2","CATCGCAATTATATTG",5,53.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40R D59L L95T N107C T201M",5
"lib2","SARS-CoV-2","CATCGCAGACAACAAA",1,39.02,8.57,-2.27,0.1,2.87,1.03,0,">1 nonsynonymous","A67F Q168D",2
"lib2","SARS-CoV-2","CATCGCATATTTCCCC",3,71.98,9.95,-0.88,0.06,2.84,1.06,0,">1 nonsynonymous","C31T L122W A190S",3
"lib2","SARS-CoV-2","CATCGCCAATAACAAA",2,76.3,10.73,-0.11,0.03,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCGCCATGACTGTG",1,6.59,9.43,-1.4,0.16,1.67,1.01,0.02,">1 nonsynonymous","N4A Y91G K114A L188W",4
"lib2","SARS-CoV-2","CATCGCCGATTTCGAT",1,11.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N40A I72L K94R G101H G146W",5
"lib2","SARS-CoV-2","CATCGCCTACACTTTG",1,35.08,9.9,-0.94,0.12,2.54,1.01,0.01,">1 nonsynonymous","Y91N G155R",2
"lib2","SARS-CoV-2","CATCGCCTGATTCACG",3,0.3,NA,NA,NA,NA,NA,NA,"stop","Y35* P82Q",2
"lib2","SARS-CoV-2","CATCGCGACGTTGGAG",2,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q Y119P P161E",3
"lib2","SARS-CoV-2","CATCGCGGTTCCCTAT",1,1.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","CATCGCTCTTAAGTAA",11,98.94,9.79,-1.05,0.09,2.48,1.07,0,">1 nonsynonymous","Y21S V115L",2
"lib2","SARS-CoV-2","CATCGGAGCCATTATG",12,9.68,NA,NA,NA,NA,NA,NA,"stop","F44P R73* L95K D137P Q176P T201S",6
"lib2","SARS-CoV-2","CATCGGAGTCTGTTTA",7,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","CATCGGTAACAAAAGG",2,19.83,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","W23M D75S Y159I P169Q",4
"lib2","SARS-CoV-2","CATCGGTAGCATAAGT",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83M L95Q",2
"lib2","SARS-CoV-2","CATCGGTCTTATGACT",2,40.99,8.24,-2.6,0.21,1.5,1.01,0.02,">1 nonsynonymous","A14G W106G",2
"lib2","SARS-CoV-2","CATCGTAAAATAAGAA",4,48.43,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","S41R F47K F167G",3
"lib2","SARS-CoV-2","CATCGTAAACCCTAGT",1,18.32,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9S F47H G101N K198L",4
"lib2","SARS-CoV-2","CATCGTAAGAACTAAT",2,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I P149N G166R",3
"lib2","SARS-CoV-2","CATCGTAATAATTCGA",7,99.6,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CATCGTAATGTACCAC",4,28.9,11.02,0.18,0.08,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCGTACCAACATCG",6,97.62,9.69,-1.15,0.06,1.89,1.11,0,">1 nonsynonymous","N64Y P96M",2
"lib2","SARS-CoV-2","CATCGTACGTTCGCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63W D90S N118S",3
"lib2","SARS-CoV-2","CATCGTATGTCGCCAG",3,35.51,10.77,-0.07,0.07,2.85,1.17,0,">1 nonsynonymous","K26R P54Q L95I",3
"lib2","SARS-CoV-2","CATCGTCACTATCGCT",8,157.84,9.14,-1.7,0.11,1.66,1.09,0.01,">1 nonsynonymous","I2N E10M F44K A81R",4
"lib2","SARS-CoV-2","CATCGTCCTCACACCA",16,205.76,10.85,0.02,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CATCGTCTAAGACTAA",4,29.31,10.74,-0.09,0.04,3,1.01,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","CATCGTGGGAAGAACA",7,10.66,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I2R V103N T170F",3
"lib2","SARS-CoV-2","CATCGTTATCCGGCGG",7,35.07,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L95K Y119S E141C",3
"lib2","SARS-CoV-2","CATCGTTATTCGCTTA",5,8.22,NA,NA,NA,NA,NA,NA,"stop","V37D D90* T148L E154I T170M",5
"lib2","SARS-CoV-2","CATCGTTGAAAACTTA",5,150.5,10.23,-0.6,0.05,2.82,1.07,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","CATCGTTGGTCAATGA",11,60.12,8.37,-2.46,0.35,1.5,1,0.05,">1 nonsynonymous","C61F P82L T100Q",3
"lib2","SARS-CoV-2","CATCGTTTAAGTAGTT",1,20.53,6.67,-4.17,0.23,1.89,1.1,0.01,">1 nonsynonymous","F62C C150S",2
"lib2","SARS-CoV-2","CATCGTTTAATTCAAC",6,86.64,10.4,-0.43,0.04,2.87,1.13,0,">1 nonsynonymous","N1V Y121Q",2
"lib2","SARS-CoV-2","CATCTAAAACAGTTAC",2,17.43,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","N1S F12E V52A Y178L",4
"lib2","SARS-CoV-2","CATCTAAACATCAAGG",3,26.41,10.36,-0.48,0.07,2.93,1.03,0,">1 nonsynonymous","F12V S43Y A190T",3
"lib2","SARS-CoV-2","CATCTAACGGTTAATC",6,160.82,9.22,-1.61,0.15,1.5,1.1,0.01,">1 nonsynonymous","F12P N120Q V173H",3
"lib2","SARS-CoV-2","CATCTAAGACCCAATA",1,50.43,10.8,-0.03,0.06,2.89,1.14,0,"1 nonsynonymous","K56T",1
"lib2","SARS-CoV-2","CATCTACACAGTGAGG",1,38.62,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86V S108P V173I",3
"lib2","SARS-CoV-2","CATCTACACTAAAGTG",16,274.3,7.93,-2.91,0.1,1.52,1.08,0,">1 nonsynonymous","F12A K114P L122A",3
"lib2","SARS-CoV-2","CATCTACCATCTTGCA",5,58.05,10.88,0.04,0.05,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CATCTACTAAGGTGAA",2,85.02,10.26,-0.58,0.04,2.82,1.02,0,">1 nonsynonymous","S45D Y91V",2
"lib2","SARS-CoV-2","CATCTACTATCCCCAC",1,14.79,9.44,-1.4,0.23,1.59,1,0.03,">1 nonsynonymous","K26M V103M",2
"lib2","SARS-CoV-2","CATCTACTCAATTAAC",8,81.7,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L60S A89Q T100A K114V",4
"lib2","SARS-CoV-2","CATCTAGCACCGAATC",2,35.54,7.84,-2.99,0.17,1.5,1.12,0.01,">1 nonsynonymous","V11H I28P P191T",3
"lib2","SARS-CoV-2","CATCTAGTTCAAAATG",6,34.95,9.04,-1.79,0.15,1.91,1.1,0.01,">1 nonsynonymous","S53I K94F",2
"lib2","SARS-CoV-2","CATCTAGTTCATCGAG",11,99.83,10.75,-0.08,0.04,2.92,1.1,0,">1 nonsynonymous","K26V T55M F160C",3
"lib2","SARS-CoV-2","CATCTATCAAGTCGGT",3,33.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12L T55V L95D F160K",4
"lib2","SARS-CoV-2","CATCTATCGTATGACT",5,11.57,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","CATCTATTCATTCCCA",13,609.63,10.7,-0.14,0.02,2.95,1.05,0,"1 nonsynonymous","F8Y",1
"lib2","SARS-CoV-2","CATCTATTGAGGTGCA",12,193.46,8.69,-2.15,0.05,2.93,1.04,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","CATCTCAAAAGCCCTA",2,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K G166Y",2
"lib2","SARS-CoV-2","CATCTCAAATGTTGGG",1,33.58,10.6,-0.24,0.13,2.92,1.09,0.01,">1 nonsynonymous","Q84G S147T",2
"lib2","SARS-CoV-2","CATCTCACATGACATA",10,72.55,10.84,0.01,0.04,2.93,1.05,0,">1 nonsynonymous","T3V S129K T201P",3
"lib2","SARS-CoV-2","CATCTCACGCCTCGGT",3,77.64,10.38,-0.45,0.05,2.89,1.04,0,">1 nonsynonymous","A14G A67L N120E K199V",4
"lib2","SARS-CoV-2","CATCTCACTATATTCA",9,56.74,10.72,-0.12,0.04,2.9,1.12,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CATCTCAGTTGAGTCC",3,17.05,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D68F G83T I88L L95R",4
"lib2","SARS-CoV-2","CATCTCATAAAATTTA",3,44.64,9.21,-1.62,0.08,1.93,1.07,0,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","CATCTCATGATCCAAA",3,32.16,9.97,-0.87,0.1,2.07,1.08,0,">1 nonsynonymous","T3M A42V A105G Q163T",4
"lib2","SARS-CoV-2","CATCTCCAATCTCTTT",1,16.49,9.74,-1.09,0.09,2.96,1.02,0,">1 nonsynonymous","I2N A145V N151P",3
"lib2","SARS-CoV-2","CATCTCCATAATCGCA",3,0.35,NA,NA,NA,NA,NA,NA,"stop","N4* D59S Y91C Q144A",4
"lib2","SARS-CoV-2","CATCTCCTACCTACTT",9,33.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N S113R",2
"lib2","SARS-CoV-2","CATCTCCTAGCCCTGA",2,25.79,10.16,-0.67,0.09,2.74,1,0,">1 nonsynonymous","F12V S36G N64T",3
"lib2","SARS-CoV-2","CATCTCGCTTGATTAC",1,44.01,10.04,-0.8,0.08,2.92,1.02,0,"1 nonsynonymous","Y159W",1
"lib2","SARS-CoV-2","CATCTCGTACTATGAT",4,21.39,10.59,-0.25,0.07,2.98,1.05,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","CATCTCTAGAAAATAT",17,102.11,6.23,-4.61,0.36,1.5,1.17,0.01,">1 nonsynonymous","F44E D137R T201R",3
"lib2","SARS-CoV-2","CATCTCTCTAGATTCT",1,9.68,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","C6S L122F Q163W P177W S184K",5
"lib2","SARS-CoV-2","CATCTGACTGCAAACC",8,0.24,NA,NA,NA,NA,NA,NA,"stop","K26L A33G S69T I104*",4
"lib2","SARS-CoV-2","CATCTGAGCAGGAATC",3,56.35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A18H D112A G146P",3
"lib2","SARS-CoV-2","CATCTGAGGCATCGAT",4,88.38,10.19,-0.64,0.02,2.87,1.03,0,">1 nonsynonymous","K56L R78I T140C T201R",4
"lib2","SARS-CoV-2","CATCTGCAACCACACT",7,133.72,10.73,-0.11,0.05,2.9,1.09,0,"1 nonsynonymous","S53P",1
"lib2","SARS-CoV-2","CATCTGCAATGTAGTC",5,29.39,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12S D68K L95C",3
"lib2","SARS-CoV-2","CATCTGCACTATCTTA",6,32.94,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F12N A18M D59E S69M S113F G174S",6
"lib2","SARS-CoV-2","CATCTGCGGTTAGAAT",2,8.55,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","T148I V181H G196I",3
"lib2","SARS-CoV-2","CATCTGCTTGCTACTC",4,80.87,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","N64T G83H Y119W K128Y R136G A190V",6
"lib2","SARS-CoV-2","CATCTGGCCATATTTT",4,24.7,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","L60A Y93H",2
"lib2","SARS-CoV-2","CATCTGTTATCTAGAA",4,0.69,NA,NA,NA,NA,NA,NA,"stop","R16* V103R",2
"lib2","SARS-CoV-2","CATCTTAACAAGCGAG",4,22.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61R N107T Y119V S139Y",4
"lib2","SARS-CoV-2","CATCTTAACCAGATTG",2,41.76,9.35,-1.49,0.07,2.63,1.12,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","CATCTTAAGGCGCAAA",3,14.56,10.03,-0.8,0.12,2.22,1.06,0.01,">1 nonsynonymous","N24M L60A D97F",3
"lib2","SARS-CoV-2","CATCTTAATAAAAAAA",7,35.01,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S113V F167T",2
"lib2","SARS-CoV-2","CATCTTAATACAAAAA",8,84.8,8.64,-2.19,0.19,1.56,1.17,0.01,">1 nonsynonymous","A22Y S29G A105Y",3
"lib2","SARS-CoV-2","CATCTTAATACAAGCA",3,8.99,8.55,-2.29,0.38,1.5,1,0.05,">1 nonsynonymous","L57F D90R G155F",3
"lib2","SARS-CoV-2","CATCTTAGATAACATA",3,25.43,10.24,-0.59,0.31,1.51,1.02,0.07,">1 nonsynonymous","T15A K94Y",2
"lib2","SARS-CoV-2","CATCTTCAAAATGAGT",5,58.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10G V20M D34C N40I",4
"lib2","SARS-CoV-2","CATCTTCACACCATTT",1,11.66,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G74P D90G Y143C N151V",4
"lib2","SARS-CoV-2","CATCTTCCAGCTACAC",5,139.26,10.01,-0.82,0.07,2.32,1.07,0,">1 nonsynonymous","N1S G9Y D34G",3
"lib2","SARS-CoV-2","CATCTTCGAAGCACAA",10,46.62,9.38,-1.45,0.08,2.01,1.07,0,">1 nonsynonymous","G9C F17A K26I",3
"lib2","SARS-CoV-2","CATCTTCGGACATCAC",2,10.15,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","E76R T170H",2
"lib2","SARS-CoV-2","CATCTTCGTAAAATGC",17,83.11,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","F99E",1
"lib2","SARS-CoV-2","CATCTTCTCTATTCTA",11,190.37,10.35,-0.49,0.04,2.84,1.09,0,">1 nonsynonymous","E10L P149L",2
"lib2","SARS-CoV-2","CATCTTCTTAATGCAA",2,0.79,NA,NA,NA,NA,NA,NA,"stop","N1I E10* A18V Y21R S53E N130L G152R",7
"lib2","SARS-CoV-2","CATCTTGCAAAATATA",6,52.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9A L60H S69P N107Y",4
"lib2","SARS-CoV-2","CATCTTGCCTTCATCT",10,430.45,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D34L F62L I72R F167S",4
"lib2","SARS-CoV-2","CATCTTGCTGATGATG",6,25.77,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","Q176S R179S",2
"lib2","SARS-CoV-2","CATCTTTAAACCTCCA",10,296.24,10.72,-0.12,0.03,2.96,1.03,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","CATCTTTCCGACTACA",6,0.26,NA,NA,NA,NA,NA,NA,"stop","F17T I28*",2
"lib2","SARS-CoV-2","CATCTTTCTAATGATC",15,128.37,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N107F S139L T201K",3
"lib2","SARS-CoV-2","CATCTTTTAAACCTTG",1,3.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","CATCTTTTAGCCGTCA",3,7.15,9.22,-1.62,0.33,2.52,1.07,0.05,">1 nonsynonymous","G9L G117V",2
"lib2","SARS-CoV-2","CATCTTTTGACAGGAG",2,12.54,10.49,-0.34,0.07,2.81,1.2,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","CATGAAAAACGAAGGA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","V37* V103G K199P",3
"lib2","SARS-CoV-2","CATGAAAAATAGGTGA",4,1.99,NA,NA,NA,NA,NA,NA,"stop","A18E N109*",2
"lib2","SARS-CoV-2","CATGAAAAATTACAGA",8,95.16,10.84,0.01,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGAAAACGAAAGAA",4,25.28,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14G I104N",2
"lib2","SARS-CoV-2","CATGAAAACGCGCGTT",5,31.95,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I2V G51S F134P",3
"lib2","SARS-CoV-2","CATGAAAATAACGCCC",2,9.8,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","V71M I88W T100P",3
"lib2","SARS-CoV-2","CATGAAAATATGGTCA",15,8.65,NA,NA,NA,NA,NA,NA,"stop","G9* K87S A145R",3
"lib2","SARS-CoV-2","CATGAAAATGCCTAGT",2,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S C49W L122R",3
"lib2","SARS-CoV-2","CATGAAACTAGATGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","V37D F44* A67S R136S",4
"lib2","SARS-CoV-2","CATGAAAGAACTAGCA",7,62.91,10.03,-0.81,0.07,2.79,1.03,0,">1 nonsynonymous","N13G G51R N171S",3
"lib2","SARS-CoV-2","CATGAAAGCAGTACTT",4,3.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82F",1
"lib2","SARS-CoV-2","CATGAAAGGGATCTAG",3,72,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T63S F167S",2
"lib2","SARS-CoV-2","CATGAAAGTATCGTAA",5,7.68,NA,NA,NA,NA,NA,NA,"stop","D34R A67N K87T L162*",4
"lib2","SARS-CoV-2","CATGAAATAAACCCAT",10,76.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A105S F126N C150R",3
"lib2","SARS-CoV-2","CATGAAATATACGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K T170I",2
"lib2","SARS-CoV-2","CATGAAATCTCCTGTT",2,23.88,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T3Y V32T L38G Y121G",4
"lib2","SARS-CoV-2","CATGAAATGCTACGCT",3,36.06,9.56,-1.28,0.09,1.94,1.15,0,">1 nonsynonymous","F62Q Y91C",2
"lib2","SARS-CoV-2","CATGAACAAAAGCCAG",2,53.74,10.37,-0.47,0.05,2.9,1.03,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","CATGAACAACCAATGA",2,31.12,10.07,-0.76,0.07,2.2,1,0,">1 nonsynonymous","F62E D90E L122V S129R",4
"lib2","SARS-CoV-2","CATGAACAATCCACAA",1,6.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126I F156L F185N",3
"lib2","SARS-CoV-2","CATGAACAATGATCAC",8,13.53,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A14T F47I F62K G86E K94Y",5
"lib2","SARS-CoV-2","CATGAACATGAGAAAT",8,62.15,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","C6F G86A F134Y G146S",4
"lib2","SARS-CoV-2","CATGAACATGTCTTAG",1,54.36,6.02,-4.82,0.76,1.5,1.12,0.01,">1 nonsynonymous","V20W V32S",2
"lib2","SARS-CoV-2","CATGAACCAGAAATAT",1,19,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L57Q L95V D137L G174K",4
"lib2","SARS-CoV-2","CATGAACCAGTTCAAT",3,0.4,NA,NA,NA,NA,NA,NA,"stop","T15P N30Y V37G K132*",4
"lib2","SARS-CoV-2","CATGAACTATTCATTA",3,18.18,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Y121R F167Q Y175G",3
"lib2","SARS-CoV-2","CATGAAGATCCCCTAA",2,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R G101H N118E E141L R179G",5
"lib2","SARS-CoV-2","CATGAAGCGGAACAAA",5,22.78,10.9,0.06,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGAAGTACAACGAC",2,2.08,NA,NA,NA,NA,NA,NA,"stop","N13Y D68R Q84R N92* L122A E135R T148A",7
"lib2","SARS-CoV-2","CATGAAGTCTAAGATA",10,340.34,10.03,-0.81,0.06,2.35,1.03,0,">1 nonsynonymous","T85V K94Q",2
"lib2","SARS-CoV-2","CATGAATAAAACAACT",12,134,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36T S45V Y91L R136M",4
"lib2","SARS-CoV-2","CATGAATAAATAAACA",10,166.31,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P133C P177L",2
"lib2","SARS-CoV-2","CATGAATAAATTACGA",1,9.45,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","Y35D F62V V103R",3
"lib2","SARS-CoV-2","CATGAATATAAAAAAT",1,10.13,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","N1Y R179P",2
"lib2","SARS-CoV-2","CATGAATATCTAAAAA",15,5.55,NA,NA,NA,NA,NA,NA,"stop","I104* L188W",2
"lib2","SARS-CoV-2","CATGAATATTTAGTGG",3,14.99,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V77K V103L N118Y",3
"lib2","SARS-CoV-2","CATGAATCACCTCGAA",18,128.15,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","Y93S D97L V153S",3
"lib2","SARS-CoV-2","CATGAATTAACCCCTA",8,202.38,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S19F N64R K87M Q176G T201L",5
"lib2","SARS-CoV-2","CATGAATTCATGATAT",6,34.92,6.3,-4.54,0.37,1.5,1.09,0.01,">1 nonsynonymous","N24V A81Y I88F D97T S139D",5
"lib2","SARS-CoV-2","CATGACAACGAAACTG",9,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88W C102N E135R V181S",4
"lib2","SARS-CoV-2","CATGACACCCAACGAG",2,9.97,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N92T K128Y L183A",3
"lib2","SARS-CoV-2","CATGACACCCGGAATC",7,53.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10Q Q84N Y143P",3
"lib2","SARS-CoV-2","CATGACACCTTTGCAA",3,27.08,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","V77W G86A",2
"lib2","SARS-CoV-2","CATGACACTAAAGACT",1,7.08,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","I28L V65R G74C F99P Y121S",5
"lib2","SARS-CoV-2","CATGACAGACATACGC",5,54.33,9.94,-0.9,0.08,2.57,1.12,0,">1 nonsynonymous","K132T V173P",2
"lib2","SARS-CoV-2","CATGACAGATGGCTTA",12,63.16,6,-4.84,0.76,1.5,1.18,0.01,">1 nonsynonymous","V37I F62Q G86S A145P",4
"lib2","SARS-CoV-2","CATGACAGCATTTGGA",1,5.55,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15L Y35N N58A W106E A190D",5
"lib2","SARS-CoV-2","CATGACATCCGAATGT",1,16.99,6.87,-3.97,0.38,2.62,1.14,0.01,">1 nonsynonymous","I28E P169L",2
"lib2","SARS-CoV-2","CATGACATTACGTTGC",9,94.43,10.55,-0.28,0.03,2.89,1.04,0,">1 nonsynonymous","P7D T100M R136Y K199S",4
"lib2","SARS-CoV-2","CATGACATTATAATCC",5,52.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R T63G D68Y",3
"lib2","SARS-CoV-2","CATGACCATAATCAGT",7,101.67,10.75,-0.08,0.05,2.91,1.12,0,"1 nonsynonymous","R78H",1
"lib2","SARS-CoV-2","CATGACCATGGAACCG",2,124.32,8.25,-2.59,0.09,2.47,1.07,0,">1 nonsynonymous","T15N R27H G166L",3
"lib2","SARS-CoV-2","CATGACCCACCGATTG",2,11.76,10.76,-0.08,0.08,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGACCTTTGCTTCC",1,0.78,NA,NA,NA,NA,NA,NA,"stop","D34* D90N K114V",3
"lib2","SARS-CoV-2","CATGACGAAATCCTTA",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31Y T55L F99A L183H",4
"lib2","SARS-CoV-2","CATGACGACGACCGTA",12,92.7,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V52S L162A",2
"lib2","SARS-CoV-2","CATGACGACTGTGACT",7,16.65,9.51,-1.33,0.39,1.5,1.11,0.08,">1 nonsynonymous","D34S E76T",2
"lib2","SARS-CoV-2","CATGACGCCTTAGAAA",2,55.37,8.97,-1.87,0.14,2.56,1.04,0.01,">1 nonsynonymous","D34N S53G R73A",3
"lib2","SARS-CoV-2","CATGACGTGCTCTGAA",4,25.4,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","W106R G172L",2
"lib2","SARS-CoV-2","CATGACGTGGTACGTA",14,94.37,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C61V A105L Y175N V181R",4
"lib2","SARS-CoV-2","CATGACTAAAAAGGTG",2,62.28,10.39,-0.45,0.03,2.9,1.08,0,"1 nonsynonymous","F156R",1
"lib2","SARS-CoV-2","CATGACTACCTCGGAT",6,86.32,10.8,-0.03,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGACTGAAAGCAAA",12,107.73,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6N C31V A89C Y119D L162Q",5
"lib2","SARS-CoV-2","CATGACTGCAACGCAC",5,5.2,10.4,-0.43,0.14,2.87,1.15,0.01,">1 nonsynonymous","T3K G9S V37T T148L",4
"lib2","SARS-CoV-2","CATGACTTTACCATAA",9,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43P L95C P149L K198V",4
"lib2","SARS-CoV-2","CATGACTTTATATTCC",1,24.58,10.93,0.09,0.05,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CATGACTTTCGTAAAT",9,91.06,10.71,-0.13,0.04,2.91,1.09,0,">1 nonsynonymous","D98E H189P",2
"lib2","SARS-CoV-2","CATGAGACACAGACGT",18,168.7,10.15,-0.69,0.06,2.66,1.01,0,">1 nonsynonymous","T46Y K56M K94A K114W",4
"lib2","SARS-CoV-2","CATGAGAGGCATTCTA",8,70.06,10.71,-0.13,0.03,2.97,1.05,0,"1 nonsynonymous","R78I",1
"lib2","SARS-CoV-2","CATGAGAGTGGGTTTT",8,140.35,10.01,-0.82,0.06,2.71,1.02,0,">1 nonsynonymous","C6V N58M T201M",3
"lib2","SARS-CoV-2","CATGAGATGATAGCAA",5,50.73,8.06,-2.77,0.18,1.8,1.09,0.01,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CATGAGCAATAGTTAG",2,22.99,10.19,-0.65,0.07,2.65,1,0,">1 nonsynonymous","L5D V37G F167Y",3
"lib2","SARS-CoV-2","CATGAGCACAACACTT",6,104.92,6.45,-4.38,0.49,1.5,1.2,0.02,">1 nonsynonymous","N30A S41P A89R",3
"lib2","SARS-CoV-2","CATGAGCGACCGAACC",3,3.9,NA,NA,NA,NA,NA,NA,"stop","I104M D112E N120F E141F V153M Q163*",6
"lib2","SARS-CoV-2","CATGAGCTATTGTGAA",7,2.29,NA,NA,NA,NA,NA,NA,"stop","T85M S129L Y159*",3
"lib2","SARS-CoV-2","CATGAGGAAACACAGA",4,16.58,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","V20S D90H V182R",3
"lib2","SARS-CoV-2","CATGAGGCAAAAGGCG",2,37.4,9.95,-0.89,0.08,2.35,1,0,"1 nonsynonymous","F47N",1
"lib2","SARS-CoV-2","CATGAGGCCAGGATAG",9,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S S41E P197M",3
"lib2","SARS-CoV-2","CATGAGGCCGTTTCCA",7,113.48,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","D90Y G172F",2
"lib2","SARS-CoV-2","CATGAGGGCCTGCTAT",4,44.68,8.82,-2.02,0.2,1.58,1.12,0.03,">1 nonsynonymous","T15L L38C L60M Y123S T140D F160N",6
"lib2","SARS-CoV-2","CATGAGGTCACAGAGA",8,179.92,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35M A105L Y175K",3
"lib2","SARS-CoV-2","CATGAGTATCATAGAC",10,177.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y91L D112Y P177C",3
"lib2","SARS-CoV-2","CATGAGTCACATGAGC",2,14.86,10.68,-0.16,0.02,2.95,1.06,0,">1 nonsynonymous","A33M G196W",2
"lib2","SARS-CoV-2","CATGAGTCAGTGCATA",5,121.97,10.91,0.07,0.04,2.99,1.03,0,">1 nonsynonymous","N64F N130R T201M",3
"lib2","SARS-CoV-2","CATGAGTCTAACATGC",2,38.94,10.87,0.03,0.04,2.9,1.1,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","CATGAGTCTCAACATT",5,26.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10S A14P C102Y",3
"lib2","SARS-CoV-2","CATGATAAGAAGAGTT",8,2.81,NA,NA,NA,NA,NA,NA,"stop","C6N S19I D59T P133*",4
"lib2","SARS-CoV-2","CATGATAATATAAATG",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93R I142M Y165K L187M",4
"lib2","SARS-CoV-2","CATGATAATATGATTG",2,16.2,10.25,-0.58,0.12,2.7,1.04,0.01,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","CATGATAATGAATCCC",2,47.07,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60W S113E Y175H",3
"lib2","SARS-CoV-2","CATGATACAAAACTAT",1,7.7,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","C6F L122P R136E",3
"lib2","SARS-CoV-2","CATGATACAGAAAGAT",3,20.54,6,-4.84,2,3,1.15,0,"1 nonsynonymous","Y93S",1
"lib2","SARS-CoV-2","CATGATACAGGAGAAA",5,106.86,10.24,-0.59,0.06,2.67,1.04,0,">1 nonsynonymous","S45L K56R",2
"lib2","SARS-CoV-2","CATGATACCATCAGTA",6,77.41,8.18,-2.65,0.11,2.85,1.06,0.01,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","CATGATACTATCGCAT",1,15.52,10.93,0.09,0.08,2.98,1.06,0,"1 nonsynonymous","K199V",1
"lib2","SARS-CoV-2","CATGATAGTGCTTTCA",6,20.05,10.17,-0.67,0.12,2.79,1,0,">1 nonsynonymous","A105Y I138C",2
"lib2","SARS-CoV-2","CATGATAGTGTAAATT",2,41.6,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y35M G116D F126L Y143T G166L",5
"lib2","SARS-CoV-2","CATGATATTTACTGAC",1,0.48,NA,NA,NA,NA,NA,NA,"stop","K26* L60R Q84L G166S P177A",5
"lib2","SARS-CoV-2","CATGATCAATACAATA",10,135.03,10.78,-0.05,0.03,2.95,1.07,0,">1 nonsynonymous","S41N D97L",2
"lib2","SARS-CoV-2","CATGATCAGCCAAAAA",3,21.51,6,-4.84,2,1.5,1.23,0.08,">1 nonsynonymous","S45K W106T Y143V T148L",4
"lib2","SARS-CoV-2","CATGATCATAACATTA",7,27.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106P R136Q",2
"lib2","SARS-CoV-2","CATGATCCAATTAAAA",1,12.17,10.29,-0.54,0.17,2.73,1,0.01,"1 nonsynonymous","V52K",1
"lib2","SARS-CoV-2","CATGATCCCCAACCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","A22* V37A C150S",3
"lib2","SARS-CoV-2","CATGATCCCGACTAAG",4,11.18,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","CATGATCCGGGCTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L Y39W",2
"lib2","SARS-CoV-2","CATGATCGCAAACGAT",4,41.56,6,-4.84,2,1.5,1.17,0.03,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","CATGATCGCGGCGGCG",1,37.81,10.79,-0.04,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGATCTAGAACAAA",3,13.69,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","T3S F8R V103G",3
"lib2","SARS-CoV-2","CATGATCTTTAATACA",5,264.03,9.07,-1.77,0.06,2.48,1.06,0,">1 nonsynonymous","R27S P177S",2
"lib2","SARS-CoV-2","CATGATGAAACAGTAA",3,27.79,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N4T P133E V182N",3
"lib2","SARS-CoV-2","CATGATGGAAAACAAA",5,126.42,10.59,-0.25,0.06,2.85,1.11,0,">1 nonsynonymous","S43T I138G",2
"lib2","SARS-CoV-2","CATGATGGGGTCTTTC",5,0.6,NA,NA,NA,NA,NA,NA,"stop","S36R D112*",2
"lib2","SARS-CoV-2","CATGATTACACTATCA",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139R G152N",2
"lib2","SARS-CoV-2","CATGATTACATTAAGA",9,54.61,6.42,-4.42,0.8,1.5,1.28,0.04,">1 nonsynonymous","F99P T201M",2
"lib2","SARS-CoV-2","CATGATTATCCCTAAT",4,27.02,10.81,-0.02,0.08,2.91,1.13,0,"1 nonsynonymous","K199H",1
"lib2","SARS-CoV-2","CATGATTATTAAAAAT",1,17.61,6.11,-4.72,1.05,1.5,1.25,0.03,"1 nonsynonymous","R25I",1
"lib2","SARS-CoV-2","CATGATTCAGCATTTA",10,16.56,NA,NA,NA,NA,NA,NA,"stop","P54I R73M G116* F185P K199I",5
"lib2","SARS-CoV-2","CATGATTCGAGGGGAT",4,52.98,10.81,-0.02,0.06,2.94,1.09,0,"1 nonsynonymous","G9T",1
"lib2","SARS-CoV-2","CATGATTTATGATATT",7,62.73,10.79,-0.05,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGCAAAAAGCAGTA",9,28.77,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A42D A105F G146L",3
"lib2","SARS-CoV-2","CATGCAAAATATCTCA",7,64.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10N L95T W106S R127L S147L K198A",6
"lib2","SARS-CoV-2","CATGCAAACGCATAAC",5,41.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7N I88D G101I",3
"lib2","SARS-CoV-2","CATGCAAGATGTGATT",18,108.13,9.73,-1.11,0.06,2.18,1.08,0,">1 nonsynonymous","D90F E186V",2
"lib2","SARS-CoV-2","CATGCAAGTGCACTCA",9,79.24,9.17,-1.66,0.15,1.5,1.12,0.01,">1 nonsynonymous","N4H G51Y D98E",3
"lib2","SARS-CoV-2","CATGCAATGGTTTTGT",3,11.48,7.78,-3.05,0.68,1.5,1,0.08,">1 nonsynonymous","Y21R D90F",2
"lib2","SARS-CoV-2","CATGCAATTAAATTAT",5,129.87,8.22,-2.61,0.16,1.85,1.13,0.01,">1 nonsynonymous","S29L E154D N157L",3
"lib2","SARS-CoV-2","CATGCAATTCTTATAC",13,45.77,6.29,-4.55,0.63,1.54,1.16,0.02,">1 nonsynonymous","A14T K114A R124L P133F",4
"lib2","SARS-CoV-2","CATGCACCCTTATTAT",4,9.28,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","I72Q V103S K132S",3
"lib2","SARS-CoV-2","CATGCACCGCATGTTA",4,58.58,10.8,-0.04,0.04,2.95,1.07,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","CATGCACGCGATGCGT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","D59* K87L T201R",3
"lib2","SARS-CoV-2","CATGCACTATACCCAA",5,58.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D68E P96R Y119A",3
"lib2","SARS-CoV-2","CATGCACTTGATTTTC",2,102.09,6.49,-4.34,0.36,1.5,1.13,0.01,">1 nonsynonymous","L57I D112M",2
"lib2","SARS-CoV-2","CATGCAGATAGTCACT",7,139.63,10.87,0.04,0.07,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGCAGATTCCGGCC",7,26.63,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G9L W106S C158P",3
"lib2","SARS-CoV-2","CATGCAGGTCGACTAC",1,62.37,10.76,-0.07,0.03,2.93,1.04,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","CATGCATAAACAAGGG",1,24.38,10.95,0.11,0.06,2.92,1.09,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","CATGCATACTATGTCA",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L K128L C150A F167R",4
"lib2","SARS-CoV-2","CATGCATCATCATAAA",1,27.6,10.02,-0.82,0.07,2.68,1.1,0,">1 nonsynonymous","R27K D34E T100L G152L",4
"lib2","SARS-CoV-2","CATGCATCATTGCACG",4,81.97,9.01,-1.82,0.06,2.53,1.07,0,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","CATGCATCGGGCATAG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","CATGCATGTGACGCCT",2,6.53,6,-4.84,2,3,1,0,">1 nonsynonymous","C6V S45M R78H A81S D97R E141C T170N",7
"lib2","SARS-CoV-2","CATGCATTGATCTAAC",5,4.1,NA,NA,NA,NA,NA,NA,"stop","S36Q S45I N58T G83H G152S P177*",6
"lib2","SARS-CoV-2","CATGCCAAATGCCAGA",4,48.3,7.19,-3.65,0.21,1.6,1.15,0.01,">1 nonsynonymous","Y35G K87N I142E",3
"lib2","SARS-CoV-2","CATGCCAACTAGTACT",8,45.35,6.81,-4.03,0.43,1.5,1.08,0.04,">1 nonsynonymous","E10Y D59W Y123T",3
"lib2","SARS-CoV-2","CATGCCAAGATATACT",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D L95K I138R Q163G",4
"lib2","SARS-CoV-2","CATGCCAATACCTCTA",8,111.5,9.7,-1.13,0.09,2.16,1.01,0,">1 nonsynonymous","G9S A14W N120E",3
"lib2","SARS-CoV-2","CATGCCACAACTAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","G51F A89* D97R H189Y",4
"lib2","SARS-CoV-2","CATGCCACACCCTCAT",5,84.78,10.27,-0.57,0.04,2.81,1.03,0,">1 nonsynonymous","D34P T201H",2
"lib2","SARS-CoV-2","CATGCCATAACTCTAT",1,3.35,NA,NA,NA,NA,NA,NA,"stop","V37* N120T",2
"lib2","SARS-CoV-2","CATGCCATATAATTTC",1,9.74,8.26,-2.57,0.19,1.66,1.09,0.02,"1 nonsynonymous","R127D",1
"lib2","SARS-CoV-2","CATGCCATCCTCCTCG",6,50.74,6,-4.84,2,3,1.23,0,">1 nonsynonymous","G74V N92L K128S Q176P T201S",5
"lib2","SARS-CoV-2","CATGCCCAAAGAGTTG",10,117.93,7.57,-3.27,0.17,1.5,1.1,0.01,">1 nonsynonymous","D112N G166R",2
"lib2","SARS-CoV-2","CATGCCCAATTAAGAA",5,38.34,9.89,-0.95,0.09,2.59,1.13,0,">1 nonsynonymous","F44K T55C V153E G196A",4
"lib2","SARS-CoV-2","CATGCCCTCTGGATTG",2,11.95,10.13,-0.71,0.06,2.94,1.07,0,">1 nonsynonymous","Y35V V173G",2
"lib2","SARS-CoV-2","CATGCCGTAGCAAATA",2,24.1,8.21,-2.63,0.15,2.52,1,0.01,"1 nonsynonymous","S113D",1
"lib2","SARS-CoV-2","CATGCCTAATATATCA",5,0.35,NA,NA,NA,NA,NA,NA,"stop","E76D T201*",2
"lib2","SARS-CoV-2","CATGCCTAGATATAGG",6,173.48,9.99,-0.85,0.04,2.9,1.09,0,"1 nonsynonymous","K114G",1
"lib2","SARS-CoV-2","CATGCGAAAATTACTA",3,135.25,10.82,-0.02,0.05,2.94,1.07,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","CATGCGAAGCTAATAT",3,5.08,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","C49R I88Q S113V Y121T V181A",5
"lib2","SARS-CoV-2","CATGCGACGCCTGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5M N24S G152C G174*",4
"lib2","SARS-CoV-2","CATGCGACGTCACTAT",7,107.64,10.17,-0.66,0.02,2.96,1.04,0,">1 nonsynonymous","K114R G166S",2
"lib2","SARS-CoV-2","CATGCGCACAGAAAAA",8,79.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12S G86K F134T",3
"lib2","SARS-CoV-2","CATGCGCAGAGAGAAG",20,102.08,8.62,-2.22,0.25,1.5,1,0.03,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","CATGCGCATTTGTTTC",5,23.95,6.95,-3.89,0.19,1.5,1.06,0.01,">1 nonsynonymous","A33R Y121R",2
"lib2","SARS-CoV-2","CATGCGCCACAATTAC",3,37.99,6.07,-4.77,0.98,1.5,1.12,0.02,">1 nonsynonymous","G9K Y66R G83V N107Q",4
"lib2","SARS-CoV-2","CATGCGCTAAAAATTT",4,60.41,10.84,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGCGCTAAATTAAG",2,53.5,9.75,-1.09,0.09,2.15,1.04,0,">1 nonsynonymous","I2D S29I K48T T63P",4
"lib2","SARS-CoV-2","CATGCGGCAATATAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K K56W N64L V77K N118L G146N G155Y",7
"lib2","SARS-CoV-2","CATGCGGGAGACGGTA",1,32.27,9.83,-1.01,0.13,2.33,1.14,0.01,">1 nonsynonymous","L57R N151S",2
"lib2","SARS-CoV-2","CATGCGGGCTCTAGTA",3,38.85,10.77,-0.06,0.05,2.98,1.03,0,">1 nonsynonymous","V37K S129G",2
"lib2","SARS-CoV-2","CATGCGGGGCAAGTTC",3,48.72,10.63,-0.21,0.06,2.95,1,0,">1 nonsynonymous","K26N N120A",2
"lib2","SARS-CoV-2","CATGCGTAGCAGTATC",1,47.01,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","R73W Y178T S200R",3
"lib2","SARS-CoV-2","CATGCGTCTCAATTGC",1,13.93,6.02,-4.82,0.44,2.18,1.09,0.01,">1 nonsynonymous","A105I R124V T140P",3
"lib2","SARS-CoV-2","CATGCGTGATAGGATC",1,17.33,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P54R C61N Y119F Q168P",4
"lib2","SARS-CoV-2","CATGCTAAACCGTCTT",8,3.34,NA,NA,NA,NA,NA,NA,"stop","V37Q Y121* P133S S184K",4
"lib2","SARS-CoV-2","CATGCTAAAGAATGAG",12,154.63,10.37,-0.46,0.05,2.95,1.04,0,">1 nonsynonymous","I28F S45F D98I T201R",4
"lib2","SARS-CoV-2","CATGCTAACTTGAATG",7,250.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7W F47N",2
"lib2","SARS-CoV-2","CATGCTAATTGAGCAG",3,12.81,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34F D137M P149S",3
"lib2","SARS-CoV-2","CATGCTACTTAGAATT",11,243.34,9.39,-1.44,0.05,1.89,1.08,0,"1 nonsynonymous","V11K",1
"lib2","SARS-CoV-2","CATGCTATAAAGTCGT",4,21.19,6,-4.84,2,1.52,1.29,0.06,">1 nonsynonymous","D34Y I72G",2
"lib2","SARS-CoV-2","CATGCTATGCTGCTTC",5,27.49,10.01,-0.82,0.13,2.37,1,0.01,">1 nonsynonymous","V20A C61L T100R",3
"lib2","SARS-CoV-2","CATGCTATTAAAAATA",1,5.03,9.85,-0.99,0.25,2.83,1.07,0.01,">1 nonsynonymous","C6E V37L N58K V115M",4
"lib2","SARS-CoV-2","CATGCTCAAAAGTCCA",3,12.48,8.67,-2.16,0.32,1.5,1,0.06,">1 nonsynonymous","A81F S129G T140G",3
"lib2","SARS-CoV-2","CATGCTCCACAGACAA",1,45.09,10.77,-0.07,0.14,2.74,1.12,0.01,"1 nonsynonymous","D59Y",1
"lib2","SARS-CoV-2","CATGCTCCGCCAGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K87G F99*",2
"lib2","SARS-CoV-2","CATGCTGTTAACGCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","N64E S113* N120G L125H E135K V182T",6
"lib2","SARS-CoV-2","CATGCTGTTACGTATA",3,165.95,10.22,-0.61,0.03,2.84,1.05,0,">1 nonsynonymous","G9L F185Y",2
"lib2","SARS-CoV-2","CATGCTTACTGGAGTT",7,92.92,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D68V A81N Y123N G166Q",4
"lib2","SARS-CoV-2","CATGGAAAAACACTAA",12,82.79,9.61,-1.23,0.07,1.95,1.1,0,">1 nonsynonymous","F17V D59F T140N",3
"lib2","SARS-CoV-2","CATGGAAAAACCCATA",6,6.66,NA,NA,NA,NA,NA,NA,"stop","T63* G116S",2
"lib2","SARS-CoV-2","CATGGAAAACCGCAAA",4,14.66,10.34,-0.5,0.05,2.97,1.03,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","CATGGAACTAACGTCA",3,8.36,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D68G K94F S200Y",3
"lib2","SARS-CoV-2","CATGGAAGACATTGCA",10,26.77,10.66,-0.18,0.05,2.93,1.06,0,">1 nonsynonymous","R78I T85N S200E",3
"lib2","SARS-CoV-2","CATGGAAGCCACTGAT",1,5.56,NA,NA,NA,NA,NA,NA,"stop","E10* N64L",2
"lib2","SARS-CoV-2","CATGGAATAGATTGAT",9,146.35,10.81,-0.03,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGGAATATAAACTT",8,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C I88E F99S D112P T201S",5
"lib2","SARS-CoV-2","CATGGACACATGTTTG",2,19.27,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","K94R R124H L125P T148D",4
"lib2","SARS-CoV-2","CATGGACAGGGGTACA",5,122.26,10.75,-0.09,0.03,2.97,1.05,0,"1 nonsynonymous","I80V",1
"lib2","SARS-CoV-2","CATGGACATATATCGT",2,249.61,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G51R I88W",2
"lib2","SARS-CoV-2","CATGGACGAGTTTCCT",1,18.84,9.62,-1.21,0.12,2.06,1.01,0.01,">1 nonsynonymous","F8G G83H",2
"lib2","SARS-CoV-2","CATGGACGGCTTACCG",3,99.15,10.69,-0.14,0.05,2.9,1.1,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","CATGGAGCGCCTAGAT",12,268.63,9.81,-1.03,0.03,2.84,1.04,0,">1 nonsynonymous","T85M G155E C195L",3
"lib2","SARS-CoV-2","CATGGAGTACTAAACG",2,57.89,10.75,-0.09,0.04,2.92,1.1,0,">1 nonsynonymous","A105S T201V",2
"lib2","SARS-CoV-2","CATGGAGTCAGATCCA",2,68.01,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N4R A42M D98G Y143C N151C G172K",6
"lib2","SARS-CoV-2","CATGGATAAACTCTTA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","T15H Y35V G51A A81* C102R E154V",6
"lib2","SARS-CoV-2","CATGGATAGAATGAGT",6,13.93,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L95S C102N S164P",3
"lib2","SARS-CoV-2","CATGGATGAGACCTAA",5,36.76,10.4,-0.44,0.12,2.28,1.01,0.01,">1 nonsynonymous","L5Y I104T R136Q",3
"lib2","SARS-CoV-2","CATGGATGGATATTTA",20,283.29,9.86,-0.98,0.07,2.38,1.07,0,">1 nonsynonymous","N4E S19K S200L",3
"lib2","SARS-CoV-2","CATGGATGTACTAAAC",5,33.39,6.25,-4.59,0.36,1.5,1.07,0.01,"1 nonsynonymous","I72H",1
"lib2","SARS-CoV-2","CATGGATGTCAGCTTA",5,0,NA,NA,NA,NA,NA,NA,"stop","G146* T170F V173S P197I",4
"lib2","SARS-CoV-2","CATGGATGTGGACCCG",10,102.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36W G86F Y91A D98S",4
"lib2","SARS-CoV-2","CATGGATGTGTCATAA",3,18.17,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V181D",1
"lib2","SARS-CoV-2","CATGGATTATAAGCTA",8,32.08,10.88,0.04,0.06,2.88,1.14,0,"1 nonsynonymous","S29A",1
"lib2","SARS-CoV-2","CATGGCAAGTACCCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77H P96C F99L L125Y F185I",5
"lib2","SARS-CoV-2","CATGGCAATTCTTACC",1,0.1,NA,NA,NA,NA,NA,NA,"stop","S41* P82A D112K Y119V",4
"lib2","SARS-CoV-2","CATGGCACCGCTAAAC",8,132.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L57M S69M R127W H189V",4
"lib2","SARS-CoV-2","CATGGCATAAACCAAT",24,338.53,10.84,0,0.04,2.94,1.07,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","CATGGCATGCACTACA",7,2.22,NA,NA,NA,NA,NA,NA,"stop","I28R S43* G86C D112V N120*",5
"lib2","SARS-CoV-2","CATGGCATGCAGAATT",1,23.99,10.84,0.01,0.06,3,1.04,0,"1 nonsynonymous","T100F",1
"lib2","SARS-CoV-2","CATGGCCACCCACAAG",7,31.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21S D68V Y91A D112L Y121I G155C",6
"lib2","SARS-CoV-2","CATGGCCAGTAAATAC",7,83.41,9.89,-0.95,0.09,2.36,1.04,0,">1 nonsynonymous","F44L Y66S",2
"lib2","SARS-CoV-2","CATGGCCCAAGAAAAG",12,211.3,10.69,-0.14,0.03,2.97,1.04,0,">1 nonsynonymous","F44M H189N",2
"lib2","SARS-CoV-2","CATGGCGACGCCTCAA",15,232.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I2F S43Y K87T D97S P177Q",5
"lib2","SARS-CoV-2","CATGGCGCAACCCTAT",1,6.24,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6V F62S G74C K87V Y93W R124P Q144L",7
"lib2","SARS-CoV-2","CATGGCGCGCTGGCGG",12,163.95,9.4,-1.44,0.05,1.78,1.07,0,">1 nonsynonymous","E10L P96S T100N",3
"lib2","SARS-CoV-2","CATGGCTAAATGTGAT",13,1.4,NA,NA,NA,NA,NA,NA,"stop","C61Q V77W T85P D97L E141*",5
"lib2","SARS-CoV-2","CATGGCTATATCACCT",7,65.21,8.41,-2.43,0.11,2.04,1.16,0.01,">1 nonsynonymous","S53F K87A P161S",3
"lib2","SARS-CoV-2","CATGGCTTGACTATGA",1,38.51,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","R25H L57K G86P S113P A190E",5
"lib2","SARS-CoV-2","CATGGCTTTAACCCTA",9,56.16,6.09,-4.75,1,1.5,1.3,0.02,">1 nonsynonymous","A18R T100W F160C F167R",4
"lib2","SARS-CoV-2","CATGGCTTTATGCGCG",5,13.25,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1R P54A D98V V103H",4
"lib2","SARS-CoV-2","CATGGGAAAGCGATAT",2,6.43,10.93,0.09,0.11,3,1.02,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","CATGGGACCAGATAAT",6,247.99,10.67,-0.16,0.05,2.84,1.07,0,">1 nonsynonymous","L111A T201A",2
"lib2","SARS-CoV-2","CATGGGATACTAGAGA",2,1.59,NA,NA,NA,NA,NA,NA,"stop","E76* T148I K199S",3
"lib2","SARS-CoV-2","CATGGGATCAAAAATA",12,81.66,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V77L I80M N107K G116Q T201W",5
"lib2","SARS-CoV-2","CATGGGCACAAGCTCT",3,24.43,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Q79K T100Y L125R R179K",4
"lib2","SARS-CoV-2","CATGGGCGATTCTTCG",2,18.92,6,-4.84,2,3,1.11,0,"1 nonsynonymous","P177H",1
"lib2","SARS-CoV-2","CATGGGCGCATACAAA",4,67.39,10.77,-0.06,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CATGGGCTCCACAAAA",14,283.98,10.2,-0.63,0.05,2.63,1.07,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","CATGGGGAAATGGTCT",3,5.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V C102S Y143R F156Y",4
"lib2","SARS-CoV-2","CATGGGGAACTTACGT",4,24.2,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G86I Y119R C158P",3
"lib2","SARS-CoV-2","CATGGGGAGAAGCAAA",1,6.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CATGGGTAAGCAGTAC",3,48.09,10.45,-0.39,0.06,2.86,1.14,0,">1 nonsynonymous","A14T A42R T201L",3
"lib2","SARS-CoV-2","CATGGGTAGTCCCTAG",3,17.7,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A14M I80F I138G T201R",4
"lib2","SARS-CoV-2","CATGGGTGTATTGGAT",5,61.21,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K48S V77K Q84M K114D L125P S139R",6
"lib2","SARS-CoV-2","CATGGGTTAATACAGT",8,2.58,NA,NA,NA,NA,NA,NA,"stop","V71* F134S K198T",3
"lib2","SARS-CoV-2","CATGGTAAATGCAGAG",5,42.41,9.6,-1.24,0.27,1.5,1,0.04,">1 nonsynonymous","C49F A105S P133S",3
"lib2","SARS-CoV-2","CATGGTAAGATATTAT",15,140.82,6,-4.84,0.57,1.5,1.13,0,">1 nonsynonymous","S36Q C61M G101I",3
"lib2","SARS-CoV-2","CATGGTAAGGAATTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* T201S",2
"lib2","SARS-CoV-2","CATGGTAGAAACGAAT",10,45.19,8.97,-1.86,0.18,1.5,1.04,0.01,">1 nonsynonymous","Y91L L162K K198I",3
"lib2","SARS-CoV-2","CATGGTAGTACTCACT",7,95.77,9.17,-1.66,0.08,1.85,1.08,0,">1 nonsynonymous","F8E Y35S S41R V173I",4
"lib2","SARS-CoV-2","CATGGTATTAACTAAG",9,170.84,8.29,-2.54,0.11,1.98,1.05,0,">1 nonsynonymous","G51I Y119H",2
"lib2","SARS-CoV-2","CATGGTCGATACCTCT",1,6.02,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","F8K F62V I80M A105E Y119M V180S",6
"lib2","SARS-CoV-2","CATGGTGGCCTTAATC",8,103.24,10.63,-0.21,0.03,2.96,1.04,0,">1 nonsynonymous","E141S P149I",2
"lib2","SARS-CoV-2","CATGTAATAAAACTTG",3,45.44,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L5M N40I V173L Q176C",4
"lib2","SARS-CoV-2","CATGTAATACTCATAA",9,278.37,10.79,-0.05,0.03,2.96,1.05,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","CATGTAATCAGGTGCG",1,14.84,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","L38R G155I",2
"lib2","SARS-CoV-2","CATGTAATCCGGACGC",6,48.7,9.82,-1.02,0.08,2.01,1.04,0,"1 nonsynonymous","W23A",1
"lib2","SARS-CoV-2","CATGTATCGCGGTAAA",2,1.78,NA,NA,NA,NA,NA,NA,"stop","A33* V180G",2
"lib2","SARS-CoV-2","CATGTATGACATGGGA",11,137.58,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","G9C I72L I88Y G174P",4
"lib2","SARS-CoV-2","CATGTATGTCCCGCCT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","Q79* G152H R179K",3
"lib2","SARS-CoV-2","CATGTCAAAGACTAGG",4,41.68,9.13,-1.7,0.25,1.5,1,0.03,">1 nonsynonymous","F12K A89S",2
"lib2","SARS-CoV-2","CATGTCAACGTACCAC",4,81.26,10.63,-0.21,0.06,2.9,1.03,0,">1 nonsynonymous","I2E K94N",2
"lib2","SARS-CoV-2","CATGTCATAGACATAA",2,0.54,NA,NA,NA,NA,NA,NA,"stop","F126* R136Q T201H",3
"lib2","SARS-CoV-2","CATGTCCAGAACATCG",10,70.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20R V32S",2
"lib2","SARS-CoV-2","CATGTCCAGCTCTGAG",1,16.14,7.1,-3.74,0.19,1.5,1.05,0.01,">1 nonsynonymous","G51Y G166L",2
"lib2","SARS-CoV-2","CATGTCGAGACGACCT",1,46.27,7.93,-2.91,0.18,1.6,1.1,0.01,">1 nonsynonymous","F12T G117T",2
"lib2","SARS-CoV-2","CATGTCTCATAGAGCT",6,131.53,9.22,-1.62,0.04,2.92,1.07,0,">1 nonsynonymous","G83R N130V F156E",3
"lib2","SARS-CoV-2","CATGTCTCGGAGTCTC",11,183.53,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A33G E76I",2
"lib2","SARS-CoV-2","CATGTCTTGATTAACC",11,161.91,10.74,-0.09,0.04,2.86,1.13,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","CATGTGACCGGATCGT",7,76.96,10.57,-0.26,0.04,2.95,1.05,0,">1 nonsynonymous","L5C E141V",2
"lib2","SARS-CoV-2","CATGTGATCCCACCCA",1,42.97,9.77,-1.07,0.09,2.74,1.07,0,">1 nonsynonymous","T85M E141C T148I",3
"lib2","SARS-CoV-2","CATGTGCGAGAATACT",6,53.16,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6S L60P I72F F99D C150Y",5
"lib2","SARS-CoV-2","CATGTGTTGTCTCGGA",2,104.03,10.75,-0.08,0.06,2.93,1.09,0,">1 nonsynonymous","R27K S129C",2
"lib2","SARS-CoV-2","CATGTTAAGGTTCTCG",9,168.19,9.63,-1.21,0.05,2.06,1.03,0,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","CATGTTAATCTTTATA",4,54.94,10.4,-0.43,0.04,2.91,1.02,0,">1 nonsynonymous","N1M R16G N151K",3
"lib2","SARS-CoV-2","CATGTTACAACAGATA",4,49.73,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37G N64T I88D G146R",4
"lib2","SARS-CoV-2","CATGTTACCATGGTCA",4,28.42,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T3D Y39T T46P Q84L E141T N171I",6
"lib2","SARS-CoV-2","CATGTTCTATTATACA",7,25.54,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F99V G155W G174V",3
"lib2","SARS-CoV-2","CATGTTGAAAGCATCT",1,19.83,10.71,-0.13,0.07,2.94,1.01,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CATGTTGGACCAGTGA",7,54.3,8.75,-2.08,0.19,1.5,1.06,0.01,">1 nonsynonymous","P82Q F160S",2
"lib2","SARS-CoV-2","CATGTTGGGGTAACGC",10,0.72,NA,NA,NA,NA,NA,NA,"stop","N92Y K128N T148S Q176*",4
"lib2","SARS-CoV-2","CATGTTTAAATAGTAA",2,7.42,10.58,-0.26,0.12,2.81,1.22,0,">1 nonsynonymous","C61T T100L",2
"lib2","SARS-CoV-2","CATGTTTATAATAATT",9,75.02,6,-4.84,1.4,1.5,1.16,0.01,">1 nonsynonymous","G9D F17P D137L Q144S L183F",5
"lib2","SARS-CoV-2","CATGTTTCCACCCTCA",5,43.83,6.4,-4.43,0.4,1.5,1.12,0.01,">1 nonsynonymous","S45M G146P G174A",3
"lib2","SARS-CoV-2","CATTAAAAGACCCACA",9,27.91,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","T3A S19C I80S C102N P133K",5
"lib2","SARS-CoV-2","CATTAAAAGTACAATA",4,2.73,NA,NA,NA,NA,NA,NA,"stop","D97* S129I Q163I V181R",4
"lib2","SARS-CoV-2","CATTAAAATTCTAAAA",3,29.06,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","N40S N107T V115P Y165R N171M K198E",6
"lib2","SARS-CoV-2","CATTAAACACCTTACC",11,357.45,8.36,-2.48,0.07,1.65,1.1,0,">1 nonsynonymous","N40D W106S Y119R",3
"lib2","SARS-CoV-2","CATTAAACCTCTAAAT",6,51.02,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N1I F12L G117K L131V T148L",5
"lib2","SARS-CoV-2","CATTAAACGAAACATG",5,53.64,10.82,-0.02,0.04,2.98,1.04,0,">1 nonsynonymous","L5S F62C",2
"lib2","SARS-CoV-2","CATTAAACTGGCACGG",4,56.85,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","D34I P82L D90Y A105V Y159T Y178T",6
"lib2","SARS-CoV-2","CATTAAAGGGCAATAC",19,14.48,8.72,-2.11,0.2,1.5,1.1,0.01,">1 nonsynonymous","N1L I104M L183T",3
"lib2","SARS-CoV-2","CATTAAATCAAAACGG",1,7.27,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","N13Y Q84T Y165R",3
"lib2","SARS-CoV-2","CATTAAATCCGTGACC",6,23.36,6.34,-4.49,0.56,1.5,1.1,0.01,">1 nonsynonymous","R16S F62V D97F V103G",4
"lib2","SARS-CoV-2","CATTAACAAAATTGTG",1,0.9,NA,NA,NA,NA,NA,NA,"stop","S19R C31* C49V F62L P82Q A89Q Y121F",7
"lib2","SARS-CoV-2","CATTAACAAACTCGTA",7,2.49,NA,NA,NA,NA,NA,NA,"stop","I2R A14* Q163K",3
"lib2","SARS-CoV-2","CATTAACAAATACACG",4,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M C61Y K94I K114G",4
"lib2","SARS-CoV-2","CATTAACATAAATCAT",5,3.14,NA,NA,NA,NA,NA,NA,"stop","R124*",1
"lib2","SARS-CoV-2","CATTAACATTTATGCA",1,69.67,10.9,0.07,0.06,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CATTAACCCATGCGGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70K S200F",2
"lib2","SARS-CoV-2","CATTAACCTCATTAAA",8,133.12,8.82,-2.02,0.14,1.58,1.12,0.01,">1 nonsynonymous","N24M K87V L131S",3
"lib2","SARS-CoV-2","CATTAACCTGAGTCAC",4,89.44,10.37,-0.46,0.06,2.93,1.06,0,">1 nonsynonymous","S53N G155C",2
"lib2","SARS-CoV-2","CATTAACGATGTACAC",11,193.06,10.77,-0.07,0.02,2.98,1.01,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","CATTAACGTACTAGTA",8,23.36,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","S41V C102P E141R",3
"lib2","SARS-CoV-2","CATTAACTCAAAACAA",4,43.34,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S43C D90I L95A K199D",4
"lib2","SARS-CoV-2","CATTAACTCCTAGATT",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149T V181S",2
"lib2","SARS-CoV-2","CATTAACTCTACAGAA",11,210.64,10.82,-0.02,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTAACTCTTTTGAA",8,130.66,10.17,-0.67,0.04,2.87,1.04,0,">1 nonsynonymous","K128L N151I",2
"lib2","SARS-CoV-2","CATTAAGAACTGTAGT",10,83.26,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E141G F167C",2
"lib2","SARS-CoV-2","CATTAAGAATGCTGAT",3,41.82,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T63V V77R F134S T140L N157L",5
"lib2","SARS-CoV-2","CATTAAGAGTAAAAAC",11,2.11,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib2","SARS-CoV-2","CATTAAGATATAGCAA",2,15.56,10.66,-0.18,0.08,2.73,1.29,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTAAGCGCATGGAA",3,44.55,10.79,-0.05,0.07,2.81,1.18,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","CATTAAGTGCTCCGTC",2,29.32,10.5,-0.34,0.04,2.94,1.04,0,">1 nonsynonymous","L5A G83R S139C",3
"lib2","SARS-CoV-2","CATTAATAAGTGCCTT",8,2.19,NA,NA,NA,NA,NA,NA,"stop","A89E N130*",2
"lib2","SARS-CoV-2","CATTAATAGCCTATAA",1,18.11,8.84,-1.99,0.09,2.97,1.03,0.01,">1 nonsynonymous","G117F S184N",2
"lib2","SARS-CoV-2","CATTAATCACATGTAA",8,208.8,10.57,-0.27,0.02,2.96,1.04,0,"1 nonsynonymous","N4W",1
"lib2","SARS-CoV-2","CATTAATCCATTAGGG",20,291.04,10.58,-0.26,0.03,2.94,1.06,0,">1 nonsynonymous","L122D K128T",2
"lib2","SARS-CoV-2","CATTAATCTATCAGGA",5,159.41,10.16,-0.67,0.04,2.78,1.07,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","CATTAATCTTTCCGAC",3,57.22,10.74,-0.1,0.06,2.85,1.11,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","CATTAATTACCCAATG",6,136.64,9.12,-1.72,0.05,2.91,1.04,0,">1 nonsynonymous","F44W D97S Y119L",3
"lib2","SARS-CoV-2","CATTAATTCATGGAAA",1,6.48,10.89,0.05,0.2,2.85,1.14,0.02,">1 nonsynonymous","T46N S69K",2
"lib2","SARS-CoV-2","CATTAATTGATAGTAA",4,11.07,10.73,-0.1,0.06,2.82,1.17,0,">1 nonsynonymous","T3Y T201V",2
"lib2","SARS-CoV-2","CATTAATTGTACAAAA",3,6.04,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N4L K48N P149I F167S",4
"lib2","SARS-CoV-2","CATTACAACGGTAATT",1,33.98,10.72,-0.11,0.03,2.94,1.07,0,">1 nonsynonymous","K56R S139E",2
"lib2","SARS-CoV-2","CATTACACAAAAACGG",8,75.62,10.49,-0.35,0.05,2.96,1.03,0,">1 nonsynonymous","G9F A33G",2
"lib2","SARS-CoV-2","CATTACACCAGGTGCG",8,103.45,10.66,-0.18,0.03,2.96,1.03,0,">1 nonsynonymous","D97K Y121F",2
"lib2","SARS-CoV-2","CATTACACCCCCAGAG",8,48.35,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","I2F F160S R179A",3
"lib2","SARS-CoV-2","CATTACACGGTTGACC",3,134.32,10.54,-0.29,0.02,2.94,1.05,0,">1 nonsynonymous","L60K N171S",2
"lib2","SARS-CoV-2","CATTACACGTGCTCGC",4,80.07,10.88,0.05,0.03,2.96,1.05,0,">1 nonsynonymous","R27V V37L D75K Y123F K128A",5
"lib2","SARS-CoV-2","CATTACACGTGTACCG",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80P T85G T100Y A105V T170F Y178I",6
"lib2","SARS-CoV-2","CATTACCAAACAAGAA",2,11.5,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C102H P149F",2
"lib2","SARS-CoV-2","CATTACCAATGATGGT",2,15.28,8.62,-2.21,0.16,2.36,1.18,0.01,">1 nonsynonymous","L5W D34N A42D T63F S113G",5
"lib2","SARS-CoV-2","CATTACCACCCCAACA",5,73.36,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S113Q F126S",2
"lib2","SARS-CoV-2","CATTACCATAAAGAGT",5,79.12,10.71,-0.12,0.02,2.95,1.05,0,">1 nonsynonymous","L5V K87R",2
"lib2","SARS-CoV-2","CATTACCATCCCATCT",3,10.45,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14W K87D T100A",3
"lib2","SARS-CoV-2","CATTACCCGAGTGTTG",2,17.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T3G S36C D112A N130V T201C",5
"lib2","SARS-CoV-2","CATTACCCGCCTGCCC",4,153.68,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T63L G172M",2
"lib2","SARS-CoV-2","CATTACCGTAAACTCA",2,1.43,NA,NA,NA,NA,NA,NA,"stop","C6R V37* F62Y I104D N130E",5
"lib2","SARS-CoV-2","CATTACCTAAAAGAGA",1,27.15,7.7,-3.14,0.21,1.5,1.06,0.01,">1 nonsynonymous","S36V S43A S45P G117C",4
"lib2","SARS-CoV-2","CATTACCTTTCAACTT",3,29.57,10,-0.84,0.09,2.69,1.06,0,">1 nonsynonymous","G83C K94A",2
"lib2","SARS-CoV-2","CATTACGTACAAACTA",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S F62K T100D P149E S184P",5
"lib2","SARS-CoV-2","CATTACTAATCAAAAC",5,0.65,NA,NA,NA,NA,NA,NA,"stop","N4W L125V K132* I142T N171M",5
"lib2","SARS-CoV-2","CATTACTACATTAAAT",7,45.68,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","N1W F8P A14F D90F F126M Q144H",6
"lib2","SARS-CoV-2","CATTACTATGCGACGT",2,45.87,10.79,-0.05,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTACTGCGCACCCG",4,11.09,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","R16Q R25V P96M",3
"lib2","SARS-CoV-2","CATTACTTCAACTATC",2,25.54,10.64,-0.2,0.11,2.79,1.19,0,"1 nonsynonymous","K48N",1
"lib2","SARS-CoV-2","CATTAGAAAACAACGA",2,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96W F134H G172R",3
"lib2","SARS-CoV-2","CATTAGAAAGCGAACG",4,38.96,10.38,-0.45,0.05,2.73,1.11,0,"1 nonsynonymous","T15G",1
"lib2","SARS-CoV-2","CATTAGAAGATCTTAT",2,11.6,6.12,-4.72,1.08,1.5,1.1,0.04,">1 nonsynonymous","A105S C150Y",2
"lib2","SARS-CoV-2","CATTAGCAACGCGCAT",3,35.03,6,-4.84,1.94,3,1.25,0.01,">1 nonsynonymous","L5K A14Y V37G Y165M P191L",5
"lib2","SARS-CoV-2","CATTAGCAAGTATTCT",5,137.12,6,-4.84,0.98,1.5,1.18,0.01,">1 nonsynonymous","N40S T140S P149A E154F Q168L",5
"lib2","SARS-CoV-2","CATTAGCAGGCTGCAT",1,5.25,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V11E S29I G51L N107G",4
"lib2","SARS-CoV-2","CATTAGCCTAAGCCCT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","F12Y Y91* W106L N151T",4
"lib2","SARS-CoV-2","CATTAGCGCACGACAG",6,157.58,10.74,-0.09,0.05,2.92,1.1,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","CATTAGCGCACTGGTA",2,27.46,10.21,-0.63,0.12,2.53,1.09,0.01,">1 nonsynonymous","V37H S43T V65S K128E",4
"lib2","SARS-CoV-2","CATTAGCTATGAAGAG",8,285.63,9.53,-1.31,0.07,1.8,1.03,0,">1 nonsynonymous","S69K L122V",2
"lib2","SARS-CoV-2","CATTAGGACTCTCGGT",8,101.16,9.39,-1.44,0.05,1.84,1.1,0,">1 nonsynonymous","F44S N58I D98H I138L",4
"lib2","SARS-CoV-2","CATTAGGCCCTCCATG",1,13.2,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A42V N64T Y93C G152D N157V",5
"lib2","SARS-CoV-2","CATTAGGCTCATTGTA",5,22.81,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N107G A145V Q163M F167S G172S",5
"lib2","SARS-CoV-2","CATTAGGTGAAACTTA",2,13.23,9.04,-1.8,0.12,1.74,1.1,0.01,">1 nonsynonymous","G9N C61L Q84T A89R",4
"lib2","SARS-CoV-2","CATTAGGTGAGTATAC",14,216.25,8.36,-2.48,0.09,2.54,1.08,0,"1 nonsynonymous","R73H",1
"lib2","SARS-CoV-2","CATTAGTCTCTAAAAC",2,20.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T55M N64S D97R F167K",4
"lib2","SARS-CoV-2","CATTAGTCTGTTGACT",6,52.14,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S29Q N64E W106V Y119F V182A",5
"lib2","SARS-CoV-2","CATTAGTGAGCGCTAT",2,59.6,10.21,-0.63,0.09,2.65,1.05,0,">1 nonsynonymous","L122C N130T",2
"lib2","SARS-CoV-2","CATTAGTTTAATCGAG",3,16.43,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7L F12N W23R V37N C49D I88N",6
"lib2","SARS-CoV-2","CATTATAAAAAACAGT",11,63.71,10.27,-0.57,0.06,2.75,1.07,0,">1 nonsynonymous","V37M F99Y N151K",3
"lib2","SARS-CoV-2","CATTATAAAAACTTTG",2,5.1,6.12,-4.71,1.73,1.5,1.32,0.03,">1 nonsynonymous","V20M C49K S69L D112Q T148N",5
"lib2","SARS-CoV-2","CATTATAAAGGTAGCG",2,37.36,9.74,-1.09,0.07,2.01,1.05,0,"1 nonsynonymous","F185S",1
"lib2","SARS-CoV-2","CATTATAACAACTGAG",10,42.56,9.92,-0.91,0.09,2.57,1,0,"1 nonsynonymous","F8P",1
"lib2","SARS-CoV-2","CATTATAACCTATTTA",1,6.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89G L122V P169F",3
"lib2","SARS-CoV-2","CATTATAATACTTTAC",1,9.63,10.8,-0.03,0.09,3,1,0,">1 nonsynonymous","R16N N64S",2
"lib2","SARS-CoV-2","CATTATACAACCCAGA",2,1.66,NA,NA,NA,NA,NA,NA,"stop","I80* V103H R179N",3
"lib2","SARS-CoV-2","CATTATACACCGGCCT",1,6.05,6.58,-4.26,0.77,3,1.04,0.01,">1 nonsynonymous","N4G A105K",2
"lib2","SARS-CoV-2","CATTATACATGCCCAC",2,1.62,NA,NA,NA,NA,NA,NA,"stop","N30*",1
"lib2","SARS-CoV-2","CATTATACGGCACAGG",8,282.12,10.71,-0.12,0.03,2.94,1.08,0,"1 nonsynonymous","C61P",1
"lib2","SARS-CoV-2","CATTATACTCTAACAT",5,18.68,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","W106D A145S P149F",3
"lib2","SARS-CoV-2","CATTATAGAAATATGG",4,3.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102N",1
"lib2","SARS-CoV-2","CATTATAGAGCCAATA",15,176.94,8.33,-2.51,0.17,1.5,1.1,0.01,">1 nonsynonymous","N118H N151S N157S",3
"lib2","SARS-CoV-2","CATTATAGAGCTCCAG",7,69.9,10.54,-0.3,0.06,2.95,1.02,0,">1 nonsynonymous","S41L T46L",2
"lib2","SARS-CoV-2","CATTATAGCAAACTAA",11,157.99,6.37,-4.46,0.57,1.5,1.17,0.03,">1 nonsynonymous","D59R Q144Y N157K",3
"lib2","SARS-CoV-2","CATTATAGTTGTAATT",2,26.93,10.16,-0.68,0.07,2.89,1.08,0,">1 nonsynonymous","A42G A81T A190P T201K",4
"lib2","SARS-CoV-2","CATTATATATAAGTTA",4,31.72,10.89,0.05,0.08,2.91,1.1,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","CATTATATCTGAGTCT",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y L95R I104C Y119S",4
"lib2","SARS-CoV-2","CATTATATTAACTATA",15,107.27,7.52,-3.31,0.3,1.5,1.05,0.03,">1 nonsynonymous","A14D N107I",2
"lib2","SARS-CoV-2","CATTATCACATGTATG",1,34.52,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","E141V C158I G166F",3
"lib2","SARS-CoV-2","CATTATCACCGAATAT",7,9.21,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R136I F185S",2
"lib2","SARS-CoV-2","CATTATCAGACAAATG",2,7.42,6.01,-4.83,2,1.5,1.26,0.07,">1 nonsynonymous","A33S K56L V71M I142K L183N",5
"lib2","SARS-CoV-2","CATTATCCCCCATAGG",12,206.38,10.48,-0.36,0.05,2.88,1.08,0,"1 nonsynonymous","N58Y",1
"lib2","SARS-CoV-2","CATTATCGTGGAGTCA",1,15.76,10.48,-0.35,0.05,2.99,1.03,0,">1 nonsynonymous","E76D N151C",2
"lib2","SARS-CoV-2","CATTATCTAACTTAGT",12,133.28,10.42,-0.42,0.04,2.89,1.05,0,">1 nonsynonymous","C61L L122N K132V",3
"lib2","SARS-CoV-2","CATTATGCATTAATCT",1,11.26,10.11,-0.73,0.15,2.53,1,0.01,">1 nonsynonymous","G9S F99L",2
"lib2","SARS-CoV-2","CATTATGGGCTATATG",12,87.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I88Y T201S",2
"lib2","SARS-CoV-2","CATTATGTTTCAATCG",2,15.12,7.43,-3.41,0.18,2.21,1.11,0.01,"1 nonsynonymous","C158T",1
"lib2","SARS-CoV-2","CATTATTACACACCCA",8,25.27,6.23,-4.61,0.86,1.5,1.18,0.04,">1 nonsynonymous","V11S T55V S69N S113R E135H",5
"lib2","SARS-CoV-2","CATTATTATGAATCAG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","K48S V52* T85V D97H",4
"lib2","SARS-CoV-2","CATTATTCCATCACCT",7,88.1,8.76,-2.08,0.11,1.56,1.08,0,">1 nonsynonymous","L38K I138Y",2
"lib2","SARS-CoV-2","CATTATTCCGGTACCC",1,26.22,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N107F I138E F167R",3
"lib2","SARS-CoV-2","CATTATTCGGCCCCAT",2,31.38,6.7,-4.14,0.31,1.5,1.14,0.01,">1 nonsynonymous","I2S A33F F62L D90A N120V Y143H T170V",7
"lib2","SARS-CoV-2","CATTATTTCCGTTTAC",3,0.69,NA,NA,NA,NA,NA,NA,"stop","Y50* L60T A89I N120P V181W",5
"lib2","SARS-CoV-2","CATTCAAAATAAATAG",7,79.68,9.15,-1.69,0.08,1.79,1.06,0,"1 nonsynonymous","F12D",1
"lib2","SARS-CoV-2","CATTCAAACTGCTGAT",1,16.2,10.52,-0.32,0.15,2.7,1.07,0.01,"1 nonsynonymous","T15M",1
"lib2","SARS-CoV-2","CATTCAAAGTTCACCA",10,165.28,10.76,-0.08,0.04,2.93,1.06,0,">1 nonsynonymous","N120E N151Q",2
"lib2","SARS-CoV-2","CATTCAAATATAGTTC",3,42.83,10.97,0.13,0.07,2.86,1.14,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","CATTCAACAGGTCGTG",5,1.01,NA,NA,NA,NA,NA,NA,"stop","T170* G174T",2
"lib2","SARS-CoV-2","CATTCAACATTTTGTT",5,133.73,10.65,-0.18,0.03,2.98,1.02,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","CATTCAAGCACTTGAA",17,187.94,9.9,-0.93,0.07,2.23,1.03,0,">1 nonsynonymous","W106R V115F",2
"lib2","SARS-CoV-2","CATTCAATACTCAGAG",5,23.48,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","P7L F12M S53P G86C G117N Y165L T170I A190C",8
"lib2","SARS-CoV-2","CATTCAATTCAGAGTT",6,62.39,6.19,-4.64,0.09,1.76,1.03,0,">1 nonsynonymous","E10K G83V W106G L162V V194A",5
"lib2","SARS-CoV-2","CATTCACATAAGGCGG",2,20.18,10.22,-0.62,0.09,2.75,1.22,0,">1 nonsynonymous","N58H A105T",2
"lib2","SARS-CoV-2","CATTCACGCTCATTAC",1,0.68,NA,NA,NA,NA,NA,NA,"stop","P133* F167R",2
"lib2","SARS-CoV-2","CATTCACGTCTTACTA",5,41.59,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9W Y50T T55K D68T Y175K",5
"lib2","SARS-CoV-2","CATTCACGTGTGTCAA",29,9.3,NA,NA,NA,NA,NA,NA,"stop","I2D V20W D59V N64* P82G W106* E141K",7
"lib2","SARS-CoV-2","CATTCACTACGATAAT",4,40.06,9.43,-1.4,0.11,2.47,1.03,0,">1 nonsynonymous","V65A Y121S",2
"lib2","SARS-CoV-2","CATTCAGAAATAGTCG",2,39.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20R K56L T140S",3
"lib2","SARS-CoV-2","CATTCAGAGGTGCAAT",14,1.26,NA,NA,NA,NA,NA,NA,"stop","T15* D97N A105R Y121T T148M G152F",6
"lib2","SARS-CoV-2","CATTCAGGAAAGCCCT",1,36.97,10.37,-0.47,0.08,2.72,1.03,0,">1 nonsynonymous","V37Q R127G I138L",3
"lib2","SARS-CoV-2","CATTCAGGATCGACAT",8,25.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17T N151Y V182S",3
"lib2","SARS-CoV-2","CATTCAGTCAACTACA",3,35.58,8.83,-2.01,0.35,1.5,1,0.05,">1 nonsynonymous","L38V Q79N N107G",3
"lib2","SARS-CoV-2","CATTCAGTCGTAGTGG",3,26.68,10.09,-0.74,0.11,2.61,1,0.01,">1 nonsynonymous","T3R A14C P149H",3
"lib2","SARS-CoV-2","CATTCATAGAAAAAGT",1,0.66,NA,NA,NA,NA,NA,NA,"stop","I2* V77S V103D",3
"lib2","SARS-CoV-2","CATTCATAGGAAGTAT",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39N N64H R73I Y119S K132M",5
"lib2","SARS-CoV-2","CATTCATAGGACTTTC",11,184.83,9.19,-1.64,0.04,1.9,1.07,0,">1 nonsynonymous","K48Q G51S D97K F160K P169I",5
"lib2","SARS-CoV-2","CATTCATGAGGGCATC",20,236.98,8.58,-2.26,0.07,2.67,1.11,0,">1 nonsynonymous","L5R A18F Y119A G146S",4
"lib2","SARS-CoV-2","CATTCATGCATGATAG",7,46.53,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F70E S129L",2
"lib2","SARS-CoV-2","CATTCATGTGGAAATA",4,20,10.62,-0.21,0.08,3,1,0,">1 nonsynonymous","R16T I104L Y121M",3
"lib2","SARS-CoV-2","CATTCATTCCCACGAC",14,216.16,9.71,-1.12,0.03,2.85,1.03,0,">1 nonsynonymous","L5Y N107E",2
"lib2","SARS-CoV-2","CATTCCAAAAAATCTT",4,70.08,10.55,-0.29,0.06,2.96,1.06,0,">1 nonsynonymous","N1E N120W",2
"lib2","SARS-CoV-2","CATTCCAAATCATAAA",2,32.23,10.55,-0.29,0.06,2.95,1.07,0,">1 nonsynonymous","S36L K128A",2
"lib2","SARS-CoV-2","CATTCCAACGTCATAA",8,38.73,7.76,-3.08,0.1,1.5,1.08,0,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","CATTCCAATACAACGG",2,10.73,10.46,-0.37,0.08,3,1.03,0,">1 nonsynonymous","S41E K132T E186S",3
"lib2","SARS-CoV-2","CATTCCACCACCTGCT",6,44.27,10.85,0.02,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTCCACCTGTTCGC",17,320.71,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","N120T G172E",2
"lib2","SARS-CoV-2","CATTCCATAAGTTATA",2,0.25,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","CATTCCATATATACAA",3,87.78,10.83,-0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTCCATCCCTGATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S G86R L183P",3
"lib2","SARS-CoV-2","CATTCCATGCTATTTA",7,67.37,6.56,-4.28,0.31,1.5,1.14,0.01,">1 nonsynonymous","T3R V37A F62I K94W",4
"lib2","SARS-CoV-2","CATTCCATTAATAGAT",5,72.4,10.67,-0.16,0.02,2.91,1.08,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","CATTCCCACCTCCACT",4,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S G116R S147N",3
"lib2","SARS-CoV-2","CATTCCCTAGAGGATT",3,86.17,10.1,-0.74,0.06,2.59,1.03,0,">1 nonsynonymous","N30D D34F",2
"lib2","SARS-CoV-2","CATTCCCTTCCCTAAA",7,23.83,6.05,-4.78,0.41,3,1.08,0,">1 nonsynonymous","L5R C61T G83Y A89L",4
"lib2","SARS-CoV-2","CATTCCTACATTACGC",1,21.89,7.4,-3.43,0.44,1.5,1.09,0.06,">1 nonsynonymous","R25P V37M K56M",3
"lib2","SARS-CoV-2","CATTCCTAGGTAGAAG",2,10.59,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","R25S S41P A67H G83V Y121H P161S",6
"lib2","SARS-CoV-2","CATTCGAAACATAACA",4,130.32,10.86,0.03,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTCGAACTAACCCT",3,52.24,6,-4.84,2,3,1.17,0,"1 nonsynonymous","R124Q",1
"lib2","SARS-CoV-2","CATTCGAATTACCAGT",11,123.3,6,-4.84,1.68,1.5,1.22,0.01,">1 nonsynonymous","T85R F99G S113P",3
"lib2","SARS-CoV-2","CATTCGATAACCGGTA",3,25.22,10.86,0.02,0.04,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTCGATAATAAAGC",1,8.68,9.83,-1.01,0.13,2.26,1,0.01,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","CATTCGATCACTAATG",1,3.19,NA,NA,NA,NA,NA,NA,"stop","G174F R179Y T201*",3
"lib2","SARS-CoV-2","CATTCGCACAACTTTT",13,81.3,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V52Q V115S S139V",3
"lib2","SARS-CoV-2","CATTCGCAGGTGTATC",3,15.46,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N64V D98Y V103R",3
"lib2","SARS-CoV-2","CATTCGCCAATTGACG",8,0.02,NA,NA,NA,NA,NA,NA,"stop","R27* V182L",2
"lib2","SARS-CoV-2","CATTCGCCACAGTTCC",1,27.81,10.66,-0.17,0.05,3,1,0,"1 nonsynonymous","T63Y",1
"lib2","SARS-CoV-2","CATTCGCCCCTACCCA",9,68.72,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T55V S113Y C158I",3
"lib2","SARS-CoV-2","CATTCGCTCAAGCTTA",8,59.56,8.3,-2.54,0.14,1.78,1.13,0.01,">1 nonsynonymous","S41A N107T P133F",3
"lib2","SARS-CoV-2","CATTCGGGAGTTGCAC",10,129.73,10.46,-0.37,0.03,2.93,1.03,0,"1 nonsynonymous","L57F",1
"lib2","SARS-CoV-2","CATTCGTGGACGAGTT",1,51.99,10.71,-0.12,0.05,3,1.04,0,"1 nonsynonymous","K114T",1
"lib2","SARS-CoV-2","CATTCGTTCTAACGTA",8,2.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","CATTCGTTCTTAAAAA",2,20.22,10.89,0.06,0.06,2.87,1.12,0,"1 nonsynonymous","P7D",1
"lib2","SARS-CoV-2","CATTCTAAAAAACAGC",12,241.86,10.05,-0.79,0.07,2.59,1.04,0,">1 nonsynonymous","L5S Y35H T100K",3
"lib2","SARS-CoV-2","CATTCTAACCTTTACG",8,160.4,9.51,-1.33,0.07,2.32,1.06,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","CATTCTACAATAGATA",3,7.43,6,-4.84,2,3,1.06,0,">1 nonsynonymous","T3D G86E G116I P133S",4
"lib2","SARS-CoV-2","CATTCTACACAGGCAA",7,39.41,10.82,-0.02,0.07,2.91,1.05,0,"1 nonsynonymous","N24G",1
"lib2","SARS-CoV-2","CATTCTACATGACCCT",2,3.02,NA,NA,NA,NA,NA,NA,"stop","K87* D98A I104R V181T",4
"lib2","SARS-CoV-2","CATTCTACGATACCAA",13,53.33,9.32,-1.52,0.25,1.5,1.01,0.04,">1 nonsynonymous","C49A P54S T85K K94G G101A S108H",6
"lib2","SARS-CoV-2","CATTCTAGAACAGTAT",4,76.79,10.81,-0.03,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTCTCACAGAATCC",10,195.83,9.83,-1.01,0.05,2.68,1.04,0,">1 nonsynonymous","E141W P149C",2
"lib2","SARS-CoV-2","CATTCTCACCATACAA",7,0.55,NA,NA,NA,NA,NA,NA,"stop","S29Q S41E P54C E135W P149* Q163F",6
"lib2","SARS-CoV-2","CATTCTCAGAGGATAG",3,34.25,10.33,-0.51,0.04,2.91,1.09,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","CATTCTCCTCCGGTCT",2,31.99,8.25,-2.59,0.21,2.1,1.07,0.02,">1 nonsynonymous","D98A N151H N157W K198N",4
"lib2","SARS-CoV-2","CATTCTCGCACCCATA",5,195.03,10.85,0.01,0.03,2.94,1.06,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","CATTCTCGTTTCAAGA",6,109.68,10.83,-0.01,0.05,2.87,1.16,0,">1 nonsynonymous","L5I S53V",2
"lib2","SARS-CoV-2","CATTCTGATCTGAGCA",2,36.09,8.38,-2.45,0.21,1.5,1.13,0.02,">1 nonsynonymous","I2N E10S G86T",3
"lib2","SARS-CoV-2","CATTCTGCGAATAAAA",6,68.85,9.61,-1.23,0.08,1.87,1.09,0,"1 nonsynonymous","Y50R",1
"lib2","SARS-CoV-2","CATTCTTCCACGCGCG",3,15.61,10.89,0.06,0.06,2.96,1.06,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","CATTCTTCTACGAGAG",2,10.91,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N107S F167C G174V",3
"lib2","SARS-CoV-2","CATTCTTTAAATCCAA",1,31.8,9.81,-1.03,0.11,2.21,1.05,0.01,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","CATTGAAAAAAATGAC",3,71.1,9.77,-1.07,0.04,2.88,1.05,0,">1 nonsynonymous","Q84S D97E I142A",3
"lib2","SARS-CoV-2","CATTGAAAAGTAAACT",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S D97N G117C L131W F160H",5
"lib2","SARS-CoV-2","CATTGAAATGAAACTA",5,42.83,10.81,-0.03,0.05,3,1.02,0,"1 nonsynonymous","K198P",1
"lib2","SARS-CoV-2","CATTGAACACAGCACG",6,179.76,10.61,-0.23,0.04,2.96,1.03,0,">1 nonsynonymous","D98R Q163S",2
"lib2","SARS-CoV-2","CATTGAACCAATAGTC",6,0.57,NA,NA,NA,NA,NA,NA,"stop","N4S G155Q T170* Y178C P197R",5
"lib2","SARS-CoV-2","CATTGAACCCGACCGG",9,259.21,9.48,-1.35,0.05,2.9,1.08,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","CATTGAACGATCTCCC",10,206.24,10.81,-0.02,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTGAAGACCCAAAG",3,10.46,6,-4.84,2,3,1.03,0,">1 nonsynonymous","R25L K56S L95G",3
"lib2","SARS-CoV-2","CATTGAATCCACAGTA",3,33.51,6.1,-4.73,1.09,1.5,1.21,0.04,">1 nonsynonymous","N4F Y35K S43Y F99C",4
"lib2","SARS-CoV-2","CATTGACCAAAACAAA",2,67.21,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","N4V N40F F167L Y178C",4
"lib2","SARS-CoV-2","CATTGACGTCTATTCC",5,12.48,9,-1.84,0.19,2.71,1,0.02,">1 nonsynonymous","T55L D137Y Q144N Y165L",4
"lib2","SARS-CoV-2","CATTGAGAACTTCTGA",4,70.19,9.58,-1.25,0.05,1.91,1.06,0,">1 nonsynonymous","E10N S45L K132Q",3
"lib2","SARS-CoV-2","CATTGAGAAGCAATTA",7,169.75,7.91,-2.93,0.12,2.46,1.08,0.01,">1 nonsynonymous","G74A K87N F126I V173F",4
"lib2","SARS-CoV-2","CATTGAGAAGCTAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6S A14N D59* L162G",4
"lib2","SARS-CoV-2","CATTGAGCACATGCAG",14,26.78,10.44,-0.4,0.31,1.5,1,0.04,">1 nonsynonymous","F8D T15I V103Q",3
"lib2","SARS-CoV-2","CATTGAGCCCCTCACT",3,27.36,8.53,-2.31,0.15,3,1.15,0.01,">1 nonsynonymous","Y159V T201G",2
"lib2","SARS-CoV-2","CATTGAGCCTTACCAC",5,44.77,9.59,-1.25,0.2,1.75,1.09,0.01,">1 nonsynonymous","K94V S129I",2
"lib2","SARS-CoV-2","CATTGAGTTCTATTAC",8,105.63,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T63S P82I G86Q H189D",4
"lib2","SARS-CoV-2","CATTGATACGCCCTTA",13,88.77,9.24,-1.6,0.21,1.5,1,0.02,">1 nonsynonymous","I2H D34W S69R E154P",4
"lib2","SARS-CoV-2","CATTGATAGGATAGAA",1,11.41,9.27,-1.56,0.12,2.16,1.06,0,">1 nonsynonymous","T15L Y91I",2
"lib2","SARS-CoV-2","CATTGATCCTTGACGC",8,55.28,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G83F Y91P I104N L111S E154A",5
"lib2","SARS-CoV-2","CATTGATTAAGCAAAA",1,22.09,10.75,-0.08,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTGATTACTGGGGC",2,1.02,NA,NA,NA,NA,NA,NA,"stop","E10* N24E S41V T63K S113Y",5
"lib2","SARS-CoV-2","CATTGATTGCATACGC",2,0,NA,NA,NA,NA,NA,NA,"stop","P7N A42S T170*",3
"lib2","SARS-CoV-2","CATTGCAACATTAATG",3,83.31,10.81,-0.02,0.04,2.84,1.15,0,"1 nonsynonymous","K56E",1
"lib2","SARS-CoV-2","CATTGCAAGCATATAA",6,61.31,9.97,-0.86,0.08,2.16,1.01,0,"1 nonsynonymous","V181T",1
"lib2","SARS-CoV-2","CATTGCATTATGGGAA",2,22.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F D137N A190T",3
"lib2","SARS-CoV-2","CATTGCCAGTAGCATT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T K56Y D137Y P149W C158S",5
"lib2","SARS-CoV-2","CATTGCCTCGCAACCA",6,3.63,NA,NA,NA,NA,NA,NA,"stop","V77* F99R G146H F167T",4
"lib2","SARS-CoV-2","CATTGCGAGTAGTCGC",4,192.9,10.85,0.02,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTGCGCTCGATAAT",6,2.37,NA,NA,NA,NA,NA,NA,"stop","A33L K48*",2
"lib2","SARS-CoV-2","CATTGCTGAGACTTCT",1,9.31,10.82,-0.01,0.17,2.9,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CATTGGAAAATGCAAA",6,81.41,10.39,-0.44,0.03,2.91,1.08,0,">1 nonsynonymous","T63G N120V Q168R",3
"lib2","SARS-CoV-2","CATTGGAAGATGACGG",3,0.84,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","CATTGGAATAACATAC",8,48.58,9.77,-1.06,0.09,2.27,1.09,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CATTGGATAATCACTT",1,20.73,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3K N4G F17C Y50L N130C",5
"lib2","SARS-CoV-2","CATTGGATCACAGGTC",9,66.74,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11G V77M K94D G101Y A192F",5
"lib2","SARS-CoV-2","CATTGGATTTTGTTAT",10,84.03,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L95A F99L E141R P149N",4
"lib2","SARS-CoV-2","CATTGGCACGTTTTAC",2,41.79,10.83,0,0.1,2.96,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CATTGGGCACCATAAC",1,50.92,10.55,-0.29,0.07,2.93,1.03,0,">1 nonsynonymous","P149L C195S",2
"lib2","SARS-CoV-2","CATTGGGGACAAACGG",1,72.9,10.51,-0.32,0.04,2.96,1.01,0,">1 nonsynonymous","N64H G83T E154R",3
"lib2","SARS-CoV-2","CATTGGGGTATGAAAG",5,67.31,10.78,-0.06,0.03,2.93,1.08,0,"1 nonsynonymous","L5C",1
"lib2","SARS-CoV-2","CATTGGGTTCAACAAA",4,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T K87Y Y91A C102Y K128W G155T T170L",7
"lib2","SARS-CoV-2","CATTGGGTTTAAAATC",2,7.18,6,-4.84,2,3,1.38,0.01,">1 nonsynonymous","G51T D97L F167I",3
"lib2","SARS-CoV-2","CATTGTAAAAACAGAT",3,16.4,10,-0.83,0.1,2.6,1.02,0.01,">1 nonsynonymous","Q79L F99W",2
"lib2","SARS-CoV-2","CATTGTAAAATATTAA",7,25.4,6,-4.84,1.36,1.5,1.12,0.01,">1 nonsynonymous","D59R G101S S184W L188F",4
"lib2","SARS-CoV-2","CATTGTAAAGAATCGA",7,54.2,8.91,-1.92,0.13,1.87,1.04,0.01,"1 nonsynonymous","R127T",1
"lib2","SARS-CoV-2","CATTGTAAAGCTCACC",7,100.3,10.58,-0.26,0.03,2.9,1.08,0,"1 nonsynonymous","F134A",1
"lib2","SARS-CoV-2","CATTGTAAATATCTTG",1,23.74,10.51,-0.32,0.07,3,1,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","CATTGTAACCGGAGAA",5,48.15,8.56,-2.28,0.06,2.87,1.02,0,">1 nonsynonymous","N171P C195F",2
"lib2","SARS-CoV-2","CATTGTAATAAATCAA",9,132.78,10.78,-0.05,0.04,2.94,1.08,0,">1 nonsynonymous","K114S Y178F",2
"lib2","SARS-CoV-2","CATTGTACAGGCTTGG",1,89.69,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T85L P177K",2
"lib2","SARS-CoV-2","CATTGTAGCCAATTAA",8,15.15,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y91T V182C",2
"lib2","SARS-CoV-2","CATTGTATAAATATCT",2,18.81,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15F T100L R124Q I142K",4
"lib2","SARS-CoV-2","CATTGTATAACTAGTA",1,34.61,10.7,-0.13,0.1,2.78,1.13,0.01,">1 nonsynonymous","N110C L122G",2
"lib2","SARS-CoV-2","CATTGTCACGATACGG",2,7.2,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","A22V C61K L95M V103S P149L T201C",6
"lib2","SARS-CoV-2","CATTGTCATTAAATGA",5,0,NA,NA,NA,NA,NA,NA,"stop","N1H E135*",2
"lib2","SARS-CoV-2","CATTGTCCAATCTTGC",2,20.25,6,-4.84,2,3,1.09,0,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","CATTGTCTTAAAACAT",2,23.4,10.29,-0.55,0.04,3,1.03,0,">1 nonsynonymous","N58A F156I",2
"lib2","SARS-CoV-2","CATTGTCTTGCAAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25D N92D C102R D137A",4
"lib2","SARS-CoV-2","CATTGTGCAAAGAGAT",1,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","CATTGTGCCAAGCACA",9,74.49,7.11,-3.73,0.38,1.5,1.15,0.04,">1 nonsynonymous","N1I G9K K94F A145V",4
"lib2","SARS-CoV-2","CATTGTGTATATTCAC",12,356.03,9.94,-0.9,0.03,2.78,1.04,0,">1 nonsynonymous","N1R D97T G174R H189Y",4
"lib2","SARS-CoV-2","CATTGTGTCAATAGGA",1,27.71,6.19,-4.65,1.08,1.5,1.08,0.05,">1 nonsynonymous","F12I D68M D112I L122S",4
"lib2","SARS-CoV-2","CATTGTTAAGCCATCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S I88S P197G",3
"lib2","SARS-CoV-2","CATTGTTATCCGCGGG",5,130.94,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55S V71E Q84L",3
"lib2","SARS-CoV-2","CATTGTTCAAAAAATT",2,34.26,6,-4.84,1.12,1.5,1.2,0.02,">1 nonsynonymous","Q84T P96D W106M G117V L122S G166Y",6
"lib2","SARS-CoV-2","CATTGTTCAGATAGTA",9,97.32,10.9,0.06,0.04,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CATTGTTGGTGCGATG",3,13.9,9.25,-1.59,0.11,1.88,1.13,0.01,">1 nonsynonymous","G9L V77Q",2
"lib2","SARS-CoV-2","CATTGTTTCACATCCA",11,126.21,10.03,-0.81,0.08,2.47,1,0,">1 nonsynonymous","N4I F12L S36Q",3
"lib2","SARS-CoV-2","CATTGTTTGTAATGAC",5,20.48,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","G9W D34N S41T I88M N107Y T170C",6
"lib2","SARS-CoV-2","CATTTAAAAAAATCGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","CATTTAAAAACCCTAC",5,50.16,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","F44V C61I P96W L122F K128Y",5
"lib2","SARS-CoV-2","CATTTAAAATTACTAT",3,89.34,8.3,-2.54,0.1,1.63,1.06,0,"1 nonsynonymous","Q176F",1
"lib2","SARS-CoV-2","CATTTAAAGAAAGAAT",7,93.33,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N107A P161L",2
"lib2","SARS-CoV-2","CATTTAAAGGTTGGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","V32D S41* N92F F99L G172I",5
"lib2","SARS-CoV-2","CATTTAACCTAATTTG",1,31.9,10.87,0.03,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTTAACTTGAAGGA",3,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104R K132S",2
"lib2","SARS-CoV-2","CATTTAAGAATAAATA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","F8* N120P",2
"lib2","SARS-CoV-2","CATTTAAGATTACAGC",1,32.12,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","F8T Y91W S129Y G166V",4
"lib2","SARS-CoV-2","CATTTAAGCGAGAAGT",12,141.36,10.84,0,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTTAAGTGCCAAGT",2,1.55,NA,NA,NA,NA,NA,NA,"stop","P7F A14* T148E",3
"lib2","SARS-CoV-2","CATTTAATATAACTAC",8,183.5,6,-4.84,1.57,1.5,1.17,0.02,">1 nonsynonymous","L60S R127P",2
"lib2","SARS-CoV-2","CATTTAATATGGGATT",8,110.31,8.73,-2.11,0.06,2.88,1.14,0,">1 nonsynonymous","G166L V173H",2
"lib2","SARS-CoV-2","CATTTAATCCTGAAAT",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G D59E Q168H",3
"lib2","SARS-CoV-2","CATTTAATTATACCCC",7,144.14,9.48,-1.36,0.09,2.46,1.05,0,">1 nonsynonymous","F12Y Y39P K87I",3
"lib2","SARS-CoV-2","CATTTAATTCTTGGAT",13,227.49,10.7,-0.14,0.02,2.94,1.07,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","CATTTAATTGCCTAAA",9,163.14,8.74,-2.1,0.09,2.31,1.07,0,">1 nonsynonymous","V37R A145T P161A",3
"lib2","SARS-CoV-2","CATTTACAACAGAATA",5,66.67,8.79,-2.04,0.07,2.51,1.12,0,">1 nonsynonymous","Y119F Y165F",2
"lib2","SARS-CoV-2","CATTTACAATGGGATC",4,1.6,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib2","SARS-CoV-2","CATTTACCCAACATAT",3,62.55,10.87,0.04,0.06,2.95,1.06,0,"1 nonsynonymous","V115K",1
"lib2","SARS-CoV-2","CATTTACCGCAACAAT",16,94,9.36,-1.47,0.18,1.5,1.01,0.02,">1 nonsynonymous","T15N R27P G51S",3
"lib2","SARS-CoV-2","CATTTACGACGAAACT",3,29.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29D D59Q C158Y",3
"lib2","SARS-CoV-2","CATTTACGGCCATCAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CATTTACTCGTTTGGT",7,61.64,10.76,-0.08,0.05,2.83,1.16,0,">1 nonsynonymous","T55A P149G",2
"lib2","SARS-CoV-2","CATTTACTTAGTTGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A18P L57T G83I T201*",4
"lib2","SARS-CoV-2","CATTTACTTGGTTATT",3,42.44,10.44,-0.39,0.03,2.94,1.07,0,">1 nonsynonymous","A42G D90W S200L",3
"lib2","SARS-CoV-2","CATTTAGAAGCAAATT",1,14.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6P N40V T46Q L57F Y91V G166N",6
"lib2","SARS-CoV-2","CATTTAGACAATAGAA",31,363.98,10.13,-0.7,0.05,2.6,1.05,0,">1 nonsynonymous","W106Y E141G",2
"lib2","SARS-CoV-2","CATTTAGCAACGCCAA",18,66.79,9.13,-1.7,0.04,1.91,1.09,0,">1 nonsynonymous","K128S F185K",2
"lib2","SARS-CoV-2","CATTTAGCCACAGTAA",2,18.32,9.48,-1.35,0.3,1.6,1.19,0.03,">1 nonsynonymous","L60V R127H T148D",3
"lib2","SARS-CoV-2","CATTTAGCTGAAGCTA",8,126.44,9.29,-1.55,0.06,1.62,1.13,0,">1 nonsynonymous","G9S A105L",2
"lib2","SARS-CoV-2","CATTTAGCTGAATGCG",3,29.31,6,-4.84,2,3,1.09,0,"1 nonsynonymous","P177Y",1
"lib2","SARS-CoV-2","CATTTAGGTCCATAAA",6,127.79,10.68,-0.15,0.02,2.93,1.07,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CATTTATACACTAGAA",3,39.61,9.35,-1.48,0.1,1.88,1.07,0,">1 nonsynonymous","N13L T63P",2
"lib2","SARS-CoV-2","CATTTATACGCCTAAC",4,43.5,9.88,-0.96,0.04,3,1.01,0,">1 nonsynonymous","K87S E141Y",2
"lib2","SARS-CoV-2","CATTTATATATTGAAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","V71K R73G K87M L95T G174*",5
"lib2","SARS-CoV-2","CATTTATATGCCCAAA",2,15.12,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86H N120R T140V S200L",4
"lib2","SARS-CoV-2","CATTTATCGTGCGGTA",3,23.79,9.55,-1.28,0.09,1.82,1.1,0,">1 nonsynonymous","I2P K94L",2
"lib2","SARS-CoV-2","CATTTATCTGAAAAAA",3,14.15,10.99,0.16,0.12,3,1.01,0.01,"1 nonsynonymous","L122M",1
"lib2","SARS-CoV-2","CATTTATGCTCTTACA",1,2.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y159H",1
"lib2","SARS-CoV-2","CATTTATGTAAATAGA",7,48.82,6,-4.84,1.16,3,1.26,0.01,">1 nonsynonymous","N13D I72T K94G Q144V P149S S184I",6
"lib2","SARS-CoV-2","CATTTATGTATCTCCT",4,60.21,8.91,-1.92,0.22,1.5,1,0.02,">1 nonsynonymous","D59V I80M",2
"lib2","SARS-CoV-2","CATTTATGTGAGTCAA",2,9.12,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G86D N92L L125C",3
"lib2","SARS-CoV-2","CATTTATTAAAGGTGA",3,10.3,9.27,-1.57,0.13,2.5,1.01,0.01,">1 nonsynonymous","G83T I142A",2
"lib2","SARS-CoV-2","CATTTATTCCTTACAC",13,253.1,10.81,-0.02,0.05,2.89,1.11,0,"1 nonsynonymous","V115Y",1
"lib2","SARS-CoV-2","CATTTCAAAAGCTTGA",5,55.15,10.77,-0.07,0.06,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","CATTTCAACCCTTAGG",7,142.61,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V37S K56A F126A N171R S200F",5
"lib2","SARS-CoV-2","CATTTCAACTTACGAA",1,2.08,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CATTTCAAGAGCCAAA",4,28.7,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F8S F47L L131W P149F",4
"lib2","SARS-CoV-2","CATTTCACAACAATGG",3,0,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","CATTTCACACAACCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6P N120* P149L",3
"lib2","SARS-CoV-2","CATTTCACACAAGCCA",12,147.93,10.83,0,0.04,2.9,1.11,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","CATTTCACACTAAAAA",1,16.91,9.7,-1.14,0.4,1.5,1.03,0.06,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","CATTTCAGCGCACGGG",1,2.68,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CATTTCATGTTCTACT",11,54.82,9.08,-1.75,0.09,1.91,1.04,0,">1 nonsynonymous","I2N R127N I138N",3
"lib2","SARS-CoV-2","CATTTCCGACCTTACT",3,10.88,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","G86W Y93D D98A N130Y",4
"lib2","SARS-CoV-2","CATTTCCGGCGATCCA",5,1.14,NA,NA,NA,NA,NA,NA,"stop","V37L C49Y T85N T201*",4
"lib2","SARS-CoV-2","CATTTCGAAGATTGGG",9,35.32,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4K G86P K128L",3
"lib2","SARS-CoV-2","CATTTCGCATATAAAT",12,65.97,8.06,-2.78,0.19,1.5,1.06,0.01,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","CATTTCGGGTCGCATG",1,56,10.23,-0.6,0.08,2.51,1,0,">1 nonsynonymous","P54R F99L",2
"lib2","SARS-CoV-2","CATTTCGTAAAGCCCA",3,94.14,10.8,-0.03,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTTCTCTAGCACTG",3,2.64,NA,NA,NA,NA,NA,NA,"stop","V37* S129L",2
"lib2","SARS-CoV-2","CATTTCTTAGTTGACA",6,143.7,7.4,-3.44,0.13,1.99,1.13,0.01,">1 nonsynonymous","P54S Y143D",2
"lib2","SARS-CoV-2","CATTTGAAATCGCATA",4,45.18,9.58,-1.26,0.07,2.91,1.06,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","CATTTGACAAGACAAA",12,259.08,10.71,-0.12,0.03,2.91,1.1,0,"1 nonsynonymous","S29F",1
"lib2","SARS-CoV-2","CATTTGACCAAAAATC",8,121.55,6.49,-4.34,0.15,1.95,1.1,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","CATTTGAGGAAGACAT",3,7.52,NA,NA,NA,NA,NA,NA,"stop","S53* Y119S N130R",3
"lib2","SARS-CoV-2","CATTTGATGCAGTCAT",2,26.33,10.77,-0.07,0.03,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CATTTGCAACAATAAG",3,6.38,9.2,-1.63,0.29,2.66,1.5,0.05,"wildtype","",0
"lib2","SARS-CoV-2","CATTTGCCTATCTTAG",1,6.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E D97L G116L S129P",4
"lib2","SARS-CoV-2","CATTTGCGCGGGAAGG",12,121.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68Y D90T L95N G101I T148M",5
"lib2","SARS-CoV-2","CATTTGCGTGCCCAGC",7,107.45,9.81,-1.03,0.07,2.6,1.04,0,">1 nonsynonymous","S41P S53F C61I N120H",4
"lib2","SARS-CoV-2","CATTTGCTATGGATAG",1,13.83,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","G146S T170P V173T E186T",4
"lib2","SARS-CoV-2","CATTTGGAATTAGTTG",4,68.54,8.99,-1.85,0.07,1.97,1.05,0,">1 nonsynonymous","G9P P161Q",2
"lib2","SARS-CoV-2","CATTTGGACATTACTG",2,16.94,10.8,-0.04,0.1,2.74,1.27,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","CATTTGGATTACTGAT",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V N64G E76C",3
"lib2","SARS-CoV-2","CATTTGGTAATAGGAG",3,45.12,10.75,-0.09,0.04,3,1.02,0,"1 nonsynonymous","V173H",1
"lib2","SARS-CoV-2","CATTTGGTAGAAACCT",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N Y93S D112K S200F",4
"lib2","SARS-CoV-2","CATTTGTGACATTACC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","A33T T55L F99S N107Q G146*",5
"lib2","SARS-CoV-2","CATTTGTGCAAACGTA",10,59.83,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1F N24R S147M G155C L162K",5
"lib2","SARS-CoV-2","CATTTGTTTGAACTAA",2,74.28,10.8,-0.03,0.06,2.9,1.09,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","CATTTTAAACGTTCTC",7,77.6,6,-4.84,1.87,1.5,1.2,0.02,">1 nonsynonymous","K48L Y91C S113K",3
"lib2","SARS-CoV-2","CATTTTAAAGAAAGTT",9,23.98,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13F V77K N107H P161A T201L",5
"lib2","SARS-CoV-2","CATTTTAAATACTAAC",3,63.48,7.03,-3.81,0.2,1.5,1.15,0.01,">1 nonsynonymous","Y35L Y123M V182L A190S",4
"lib2","SARS-CoV-2","CATTTTAAATAGAGTA",3,67.19,10.4,-0.44,0.05,2.92,1.01,0,">1 nonsynonymous","R16W D98V",2
"lib2","SARS-CoV-2","CATTTTAAATCATGAT",4,45.36,6,-4.84,2,3,1.18,0,">1 nonsynonymous","I2L C31W T100K N107I",4
"lib2","SARS-CoV-2","CATTTTAACCTCGAAA",5,106.49,10.06,-0.78,0.06,2.79,1.01,0,">1 nonsynonymous","G116L F126L",2
"lib2","SARS-CoV-2","CATTTTAACTATGGAA",10,1.98,NA,NA,NA,NA,NA,NA,"stop","S69K S113* N120E",3
"lib2","SARS-CoV-2","CATTTTAATGCCCCAG",2,103.76,6.89,-3.94,0.29,1.5,1.13,0.02,">1 nonsynonymous","F12S G146W",2
"lib2","SARS-CoV-2","CATTTTACAAATCTGT",11,154.02,10.72,-0.12,0.04,2.94,1.07,0,">1 nonsynonymous","Q144P P197V",2
"lib2","SARS-CoV-2","CATTTTACATGTGATA",7,50.02,6.41,-4.42,0.53,1.5,1.21,0.02,">1 nonsynonymous","Y35M F47D",2
"lib2","SARS-CoV-2","CATTTTACATTTCATA",12,137.4,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I88D P161S Q168I",3
"lib2","SARS-CoV-2","CATTTTACCTCATATA",7,28.17,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10W N64W W106K",3
"lib2","SARS-CoV-2","CATTTTATACGTTTTA",6,0.85,NA,NA,NA,NA,NA,NA,"stop","A33S N107Y R136*",3
"lib2","SARS-CoV-2","CATTTTATATCTTATT",4,19.05,6,-4.84,0.98,3,1.18,0.01,">1 nonsynonymous","I28K V37F N107R G152D",4
"lib2","SARS-CoV-2","CATTTTCATAAGTATT",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D T100S L183I H189Y",4
"lib2","SARS-CoV-2","CATTTTCATCTAGCAT",1,6.7,6.43,-4.41,0.53,3,1.01,0,">1 nonsynonymous","E10C L57Y Q144L P149C T201I",5
"lib2","SARS-CoV-2","CATTTTCCCTAAATAG",2,12.81,10.35,-0.48,0.11,2.78,1.21,0,">1 nonsynonymous","I2D D90W D98N",3
"lib2","SARS-CoV-2","CATTTTCCTACAGCTT",8,167.37,10.64,-0.19,0.02,2.99,1.02,0,">1 nonsynonymous","D98R N130I",2
"lib2","SARS-CoV-2","CATTTTCTGCATGCAT",6,4.97,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","CATTTTGCTCAGCTGT",2,9.8,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D34E D68V I80L A89C R124Q N171S",6
"lib2","SARS-CoV-2","CATTTTGGTAAGTATG",3,10.09,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T3F P54C T100R D112Y",4
"lib2","SARS-CoV-2","CATTTTGTATTTTATG",6,89.79,8.5,-2.34,0.08,1.7,1.1,0,">1 nonsynonymous","K56S G86M",2
"lib2","SARS-CoV-2","CATTTTGTTACGCCGG",26,7.45,NA,NA,NA,NA,NA,NA,"stop","S19K Y66S P82S N110*",4
"lib2","SARS-CoV-2","CCAAAAAAAAGTCACA",7,51.71,7.85,-2.99,0.31,1.5,1.05,0.02,">1 nonsynonymous","V20M L122W",2
"lib2","SARS-CoV-2","CCAAAAAACACGAATA",5,85.24,10.74,-0.09,0.03,2.92,1.08,0,">1 nonsynonymous","T15S D90S",2
"lib2","SARS-CoV-2","CCAAAAAACACTAAAA",6,29.65,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V32K D90N L95T Y119C G174K",5
"lib2","SARS-CoV-2","CCAAAAAACGATAACT",3,25.27,9.79,-1.05,0.12,2.19,1.07,0.01,">1 nonsynonymous","T100I C102F",2
"lib2","SARS-CoV-2","CCAAAAAACTCGCGGA",13,221.14,10.09,-0.75,0.04,2.81,1.02,0,">1 nonsynonymous","N4T N107S T140R",3
"lib2","SARS-CoV-2","CCAAAAAAGTCATTAG",5,18.69,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","D68R V103G Y178L",3
"lib2","SARS-CoV-2","CCAAAAAAGTTCGCGT",1,136.95,8.28,-2.55,0.11,2.78,1.07,0.01,">1 nonsynonymous","D90F L122Q Y175S",3
"lib2","SARS-CoV-2","CCAAAAAATAATTCTT",1,10.36,9.97,-0.86,0.19,2.24,1,0.01,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","CCAAAAAATGATTCTA",6,28.83,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","S19A S53E C150M V173L S184I",5
"lib2","SARS-CoV-2","CCAAAAAATTACCTAT",2,56.59,10.75,-0.08,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAAAAATTACGGTT",3,48.58,10.26,-0.58,0.03,3,1.02,0,">1 nonsynonymous","Y35T K132L",2
"lib2","SARS-CoV-2","CCAAAAAATTCAGCAA",5,38.88,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F126L C158L",2
"lib2","SARS-CoV-2","CCAAAAACAAATTACA",9,149.12,10.75,-0.09,0.03,2.92,1.07,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","CCAAAAACAAATTCGC",4,103.25,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T46P Y175I",2
"lib2","SARS-CoV-2","CCAAAAACAGCACAAA",11,105.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y119L L131A",2
"lib2","SARS-CoV-2","CCAAAAACATCATCAC",5,27.98,10.52,-0.32,0.09,2.92,1,0,">1 nonsynonymous","D90F N120E",2
"lib2","SARS-CoV-2","CCAAAAACCGTAGCCA",2,51.71,9.75,-1.08,0.11,2.11,1.08,0.01,"1 nonsynonymous","S69G",1
"lib2","SARS-CoV-2","CCAAAAACGTTATTAT",3,118.92,10.82,-0.01,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAAAACGTTTGAGG",3,69.21,9.2,-1.64,0.1,1.93,1.09,0,">1 nonsynonymous","R78V P82A",2
"lib2","SARS-CoV-2","CCAAAAACTATAGTCC",4,46.93,9.67,-1.17,0.16,1.52,1.17,0.02,">1 nonsynonymous","V52D A89T",2
"lib2","SARS-CoV-2","CCAAAAAGATAGAGAC",2,12.92,8.31,-2.53,0.21,2.01,1.06,0.02,">1 nonsynonymous","P96R Y119A",2
"lib2","SARS-CoV-2","CCAAAAAGCCAAACTA",2,31.64,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","S53F I88F T100R Y119V Q168C",5
"lib2","SARS-CoV-2","CCAAAAAGCCCATTAC",2,44.3,9.07,-1.77,0.07,3,1.03,0,">1 nonsynonymous","R78T N157S",2
"lib2","SARS-CoV-2","CCAAAAAGTATACACA",3,8.71,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","G9F C61H C102P P133H",4
"lib2","SARS-CoV-2","CCAAAAATAACAAGTA",5,155.33,10.31,-0.53,0.06,2.84,1.03,0,">1 nonsynonymous","T100N S129L",2
"lib2","SARS-CoV-2","CCAAAAATATCTCACG",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y C102V",2
"lib2","SARS-CoV-2","CCAAAAATCTTTAAGG",12,95.6,6,-4.84,2,1.5,1.37,0.03,">1 nonsynonymous","G86I Y93S E154C",3
"lib2","SARS-CoV-2","CCAAAAATGAACCTAT",3,21.45,8.74,-2.1,0.09,2.81,1.21,0,">1 nonsynonymous","E10A A145D",2
"lib2","SARS-CoV-2","CCAAAAATGGACCATA",1,21.93,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G51L C61L A81K F99W E154M Y175L T201P",7
"lib2","SARS-CoV-2","CCAAAAATTCGACGAT",5,31.08,10.69,-0.14,0.05,2.94,1.07,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","CCAAAAATTGAGCAAG",5,27.71,10.81,-0.03,0.04,2.98,1.03,0,">1 nonsynonymous","P54L E141A S147N N151F",4
"lib2","SARS-CoV-2","CCAAAAATTTAATAGA",10,92.72,10.78,-0.06,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAAACAAATACTCT",3,0.13,NA,NA,NA,NA,NA,NA,"stop","I2Y S147T G196*",3
"lib2","SARS-CoV-2","CCAAAACAAATCTAAC",11,103.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9P D97L N107H E141S A145Q P197S",6
"lib2","SARS-CoV-2","CCAAAACACTGTTACA",1,25.04,10.22,-0.62,0.09,2.88,1.11,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","CCAAAACAGAGAAGAT",6,50.88,6,-4.84,1.39,1.5,1.19,0.01,">1 nonsynonymous","Q84F D90S S139P Y178W F185A",5
"lib2","SARS-CoV-2","CCAAAACAGCTAAATA",1,19.5,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V77G I104D N107F",3
"lib2","SARS-CoV-2","CCAAAACATATACGTT",2,14.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y50P P54G V103F F167C",4
"lib2","SARS-CoV-2","CCAAAACCACCGTGAT",15,14.26,NA,NA,NA,NA,NA,NA,"stop","A89T C102L P149* T201H",4
"lib2","SARS-CoV-2","CCAAAACCATGGGATC",12,213.22,10.68,-0.16,0.04,2.86,1.1,0,"1 nonsynonymous","F160D",1
"lib2","SARS-CoV-2","CCAAAACCGACGAGCC",19,275.03,10.7,-0.13,0.02,2.96,1.05,0,">1 nonsynonymous","S43V F62Y G152S",3
"lib2","SARS-CoV-2","CCAAAACGATGTTGAA",10,48.43,6.14,-4.7,0.84,1.81,1.3,0.02,">1 nonsynonymous","K56S S113V Y119R C158M",4
"lib2","SARS-CoV-2","CCAAAACGCATACGAC",2,17.84,10.73,-0.1,0.08,2.91,1.07,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","CCAAAACGGTGCTTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S19K V103* F126I",3
"lib2","SARS-CoV-2","CCAAAACGTATATTTG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","F62A S129A S139N Y143*",4
"lib2","SARS-CoV-2","CCAAAACGTCCCGTAT",1,25.87,10.96,0.12,0.08,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAAAACTAAACTATC",2,67.31,10.65,-0.19,0.05,2.91,1.05,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","CCAAAACTAATGCCCA",1,14.41,9.96,-0.88,0.14,2.9,1,0.01,">1 nonsynonymous","D112V L122R",2
"lib2","SARS-CoV-2","CCAAAACTACGAATAC",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118R T148R",2
"lib2","SARS-CoV-2","CCAAAACTTAGAAGTG",3,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G155E L162P",2
"lib2","SARS-CoV-2","CCAAAACTTAGGATAT",2,110.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37K I88H K94F",3
"lib2","SARS-CoV-2","CCAAAAGAAACAAACG",1,38.15,10.79,-0.04,0.07,3,1.02,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","CCAAAAGAAATAAAAA",4,25.41,10.79,-0.05,0.08,2.85,1.14,0,"1 nonsynonymous","Q84K",1
"lib2","SARS-CoV-2","CCAAAAGACGAATCTT",7,34.55,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","N13V D59V K132S S139Y F156S F167P",6
"lib2","SARS-CoV-2","CCAAAAGATGCTCATC",15,123.44,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I88D E141I N151T",3
"lib2","SARS-CoV-2","CCAAAAGATTAGATCC",12,26.45,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A33T G86W N107Q Y121I",4
"lib2","SARS-CoV-2","CCAAAAGCCCAAACGG",11,117.88,6.15,-4.68,0.64,1.5,1.1,0.01,">1 nonsynonymous","G146T N151L F160V Y178L",4
"lib2","SARS-CoV-2","CCAAAAGGCGCATCGC",2,22.4,10.12,-0.72,0.09,2.79,1.02,0,">1 nonsynonymous","T15Y N30L A42Q",3
"lib2","SARS-CoV-2","CCAAAAGTATGCAGTA",2,67.96,10.85,0.01,0.1,2.72,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAAAGTCAAGCCAA",10,5.7,NA,NA,NA,NA,NA,NA,"stop","P96T Q144* T148D V173R F185M",5
"lib2","SARS-CoV-2","CCAAAATACAAATCGA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","S19L R27P D68M G74V V115* S139L P149E",7
"lib2","SARS-CoV-2","CCAAAATACTACGAAA",2,38.66,8.11,-2.72,0.19,1.52,1.02,0.01,">1 nonsynonymous","S113Y N120V T140R",3
"lib2","SARS-CoV-2","CCAAAATATGGTTCTA",4,2.15,NA,NA,NA,NA,NA,NA,"stop","K56N T63* D98Q",3
"lib2","SARS-CoV-2","CCAAAATCCAAACTAT",2,31.19,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y178V V182L",2
"lib2","SARS-CoV-2","CCAAAATCGCGTTGAA",3,20.08,10.76,-0.07,0.17,2.7,1.33,0.01,"1 nonsynonymous","N130S",1
"lib2","SARS-CoV-2","CCAAAATCGCTTAGAG",10,198.96,10,-0.84,0.07,2.25,1.03,0,">1 nonsynonymous","I80M A190H T201V",3
"lib2","SARS-CoV-2","CCAAAATCGTTATGAA",5,97.98,10.46,-0.38,0.03,2.95,1.03,0,">1 nonsynonymous","T55Y S129L",2
"lib2","SARS-CoV-2","CCAAAATCTGATTTGG",5,84.23,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","E10M V20S F47I D90Y Q176T",5
"lib2","SARS-CoV-2","CCAAAATGAGACATCA",5,0.2,NA,NA,NA,NA,NA,NA,"stop","R127H E141*",2
"lib2","SARS-CoV-2","CCAAAATGCATCCGTG",13,12.66,NA,NA,NA,NA,NA,NA,"stop","A14S A22K V32M F44*",4
"lib2","SARS-CoV-2","CCAAAATTAACTAGGT",6,156.2,9.41,-1.42,0.08,2.16,1.1,0,">1 nonsynonymous","I28L D34W C61V Q79Y",4
"lib2","SARS-CoV-2","CCAAAATTGTTTTCAA",10,144.06,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","L38N P54M G101V G166E P177V",5
"lib2","SARS-CoV-2","CCAAAATTTCTTAAAC",5,56,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40D A105M R124S",3
"lib2","SARS-CoV-2","CCAAACAACACAGAGC",11,42.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5N V32I A42K G83V F99Q",5
"lib2","SARS-CoV-2","CCAAACAAGCCCCTTA",2,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V P96G",2
"lib2","SARS-CoV-2","CCAAACAAGGCCGACA",8,100.75,8.91,-1.92,0.17,1.52,1.14,0.01,">1 nonsynonymous","L5W N92G",2
"lib2","SARS-CoV-2","CCAAACAATACCAAAA",2,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R N92A A105G K128M",4
"lib2","SARS-CoV-2","CCAAACACCAAATGTA",2,10.36,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C61I A81Y Y123N",3
"lib2","SARS-CoV-2","CCAAACACGAGTTGAA",7,37.62,9.59,-1.25,0.07,2.71,1.03,0,">1 nonsynonymous","T55E N107T",2
"lib2","SARS-CoV-2","CCAAACACGTAATAAA",7,30.25,7.29,-3.54,0.17,1.63,1.1,0.01,">1 nonsynonymous","W23G Y91M S164R",3
"lib2","SARS-CoV-2","CCAAACACTTAATTCC",11,44.73,6,-4.84,2,2.87,1.23,0.01,">1 nonsynonymous","K56T P82R G86C N92M",4
"lib2","SARS-CoV-2","CCAAACAGTAATGCCT",1,12.49,9.17,-1.67,0.13,1.99,1.07,0.01,">1 nonsynonymous","S41G C61A A81Q Y123A",4
"lib2","SARS-CoV-2","CCAAACATACATATCA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","Y39G P96*",2
"lib2","SARS-CoV-2","CCAAACATACCAAAGT",3,12.59,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","I2E T15W Y91L C102R L122S",5
"lib2","SARS-CoV-2","CCAAACATTAAAGCTG",4,129.01,10.39,-0.44,0.04,2.9,1.06,0,">1 nonsynonymous","S41L N58L",2
"lib2","SARS-CoV-2","CCAAACATTAAATCGT",2,33.07,10.47,-0.36,0.06,2.94,1.03,0,"1 nonsynonymous","F44Q",1
"lib2","SARS-CoV-2","CCAAACATTTGAAACA",3,20.58,10.6,-0.24,0.08,2.88,1.11,0.01,">1 nonsynonymous","V11I V37T D59F",3
"lib2","SARS-CoV-2","CCAAACATTTTTGAAA",5,74.59,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C6F A14C S41R K94T",4
"lib2","SARS-CoV-2","CCAAACCATCACCACA",3,50.61,10.78,-0.06,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAACCCAGGACACA",3,11.78,6,-4.84,2,1.5,1.4,0.05,">1 nonsynonymous","P54D P82L F156A",3
"lib2","SARS-CoV-2","CCAAACCCCAAAAACT",6,53.34,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","G101N F156R",2
"lib2","SARS-CoV-2","CCAAACCCCCATCACG",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L D90L",2
"lib2","SARS-CoV-2","CCAAACCCGTTCCCAG",4,37.13,6,-4.84,1.45,1.5,1.19,0.02,">1 nonsynonymous","I2V E10K C61L G86N L95R V115L",6
"lib2","SARS-CoV-2","CCAAACCCTTATGTAT",4,72.21,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A33G I80W P177G",3
"lib2","SARS-CoV-2","CCAAACCGGTGCGAAG",6,33.74,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V103L S113M Q144E",3
"lib2","SARS-CoV-2","CCAAACCGTCCTAAAA",6,1.34,NA,NA,NA,NA,NA,NA,"stop","C6F N64K K132Y P149* T201V",5
"lib2","SARS-CoV-2","CCAAACCTATCCTTTA",12,3.55,NA,NA,NA,NA,NA,NA,"stop","N1* N107D S139H",3
"lib2","SARS-CoV-2","CCAAACCTCGCGAACT",7,149.94,10.32,-0.51,0.04,2.85,1.04,0,">1 nonsynonymous","T15K G152L",2
"lib2","SARS-CoV-2","CCAAACCTGAGGTATA",1,25.02,9.88,-0.96,0.15,2.57,1.19,0.01,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","CCAAACGAACGTAGAT",8,35.87,9.4,-1.44,0.2,1.5,1,0.02,">1 nonsynonymous","Y50S L60H",2
"lib2","SARS-CoV-2","CCAAACGAGGGAAAAA",4,25.26,10.09,-0.75,0.1,2.74,1,0.01,"1 nonsynonymous","D34I",1
"lib2","SARS-CoV-2","CCAAACGAGTCCAGAG",4,161.42,9.32,-1.52,0.04,2.97,1.05,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","CCAAACGCATGAAAAC",3,26.16,9.96,-0.88,0.06,2.94,1.05,0,">1 nonsynonymous","A105T Q168N",2
"lib2","SARS-CoV-2","CCAAACGCCTCAAGAG",3,24.01,8.15,-2.69,0.19,1.54,1.15,0.02,">1 nonsynonymous","K48S T55Y A89R L122F",4
"lib2","SARS-CoV-2","CCAAACGGCAACCCTT",14,156.15,8.18,-2.65,0.17,1.64,1.09,0.01,"1 nonsynonymous","Y165D",1
"lib2","SARS-CoV-2","CCAAACGTAATAATTT",4,43.7,7.51,-3.33,0.28,1.5,1.06,0.03,">1 nonsynonymous","G9P T15P Q84P K128R",4
"lib2","SARS-CoV-2","CCAAACGTACCAGAAT",3,1.27,NA,NA,NA,NA,NA,NA,"stop","K26* T148F",2
"lib2","SARS-CoV-2","CCAAACGTCACTTTCA",2,1.11,NA,NA,NA,NA,NA,NA,"stop","L38F G86N N110S Y159T E186*",5
"lib2","SARS-CoV-2","CCAAACTAAATACAAA",1,16.86,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5Y V65Y I104W N107A F167W",5
"lib2","SARS-CoV-2","CCAAACTACCGTAGCC",4,80.99,10.77,-0.06,0.06,2.89,1.11,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","CCAAACTACTGATATA",2,19.21,9.35,-1.49,0.09,2.77,1.19,0,">1 nonsynonymous","N4L D98E T170N P197L",4
"lib2","SARS-CoV-2","CCAAACTAGGCCCACG",3,21.08,10.56,-0.28,0.09,2.95,1.09,0,">1 nonsynonymous","I2M S41H",2
"lib2","SARS-CoV-2","CCAAACTATTACGATT",10,149.39,10.79,-0.05,0.04,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAACTCAATCTTAC",6,24.74,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","F99R G116R E141N Y159D",4
"lib2","SARS-CoV-2","CCAAACTCTAAACGTG",5,39.8,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F62I L125K P133L C150M",4
"lib2","SARS-CoV-2","CCAAACTGAGATAAAA",2,26.34,6.53,-4.31,0.32,1.5,1.13,0.01,">1 nonsynonymous","V37T G86L E154A",3
"lib2","SARS-CoV-2","CCAAACTGCATTCACA",14,146.73,9.51,-1.33,0.14,1.93,1.14,0.01,">1 nonsynonymous","C61Q P96V",2
"lib2","SARS-CoV-2","CCAAACTTACCTTCAG",6,28.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A42M Y93V W106F Y143R",4
"lib2","SARS-CoV-2","CCAAACTTCCCCTAAC",9,1.38,NA,NA,NA,NA,NA,NA,"stop","G9R S19L A192S T201*",4
"lib2","SARS-CoV-2","CCAAAGAAACATTCAT",19,337.99,9.3,-1.54,0.09,1.96,1.1,0,">1 nonsynonymous","P7S Q84S G152N L162T P197S",5
"lib2","SARS-CoV-2","CCAAAGAACAAAAAAC",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71L G86S",2
"lib2","SARS-CoV-2","CCAAAGAAGAAGTACT",10,6.85,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","K56M V173L V182E",3
"lib2","SARS-CoV-2","CCAAAGAAGTAAAACA",2,12.18,10.4,-0.44,0.16,2.76,1.07,0.01,">1 nonsynonymous","V32E A89P K114Q",3
"lib2","SARS-CoV-2","CCAAAGAATAGGGAGC",4,21.04,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","C31E R73T Q84P V103T",4
"lib2","SARS-CoV-2","CCAAAGAATCTCCCCC",2,75.56,9.82,-1.01,0.08,2.25,1.06,0,">1 nonsynonymous","I2S N13L V32S K56C",4
"lib2","SARS-CoV-2","CCAAAGAATTCACCGA",6,73.24,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y50I V103Y S139R P149S V173T T201W",6
"lib2","SARS-CoV-2","CCAAAGACAAGAAAAG",1,15.58,9.85,-0.99,0.24,1.81,1.06,0.01,"1 nonsynonymous","W23N",1
"lib2","SARS-CoV-2","CCAAAGACACAGATTT",1,10.52,9.36,-1.48,0.08,2.95,1.08,0,">1 nonsynonymous","Y39R Y119S",2
"lib2","SARS-CoV-2","CCAAAGAGAATAGTAG",3,9.28,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","P82Q Y91L P149L",3
"lib2","SARS-CoV-2","CCAAAGATCCATCGTA",1,7.79,10.76,-0.08,0.09,2.62,1.35,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCAAAGCAAAAAAGCC",6,116.06,10.71,-0.12,0.02,2.95,1.05,0,">1 nonsynonymous","K56T V115W V153M",3
"lib2","SARS-CoV-2","CCAAAGCAACAACTTC",5,31.57,9.2,-1.64,0.12,1.76,1.11,0.01,">1 nonsynonymous","W106N K199V",2
"lib2","SARS-CoV-2","CCAAAGCAATCGCCTT",3,98.82,8.92,-1.92,0.07,2.88,1.04,0,"1 nonsynonymous","Y143E",1
"lib2","SARS-CoV-2","CCAAAGCACAAACAAA",12,110.23,6.54,-4.3,0.3,1.5,1.12,0.01,">1 nonsynonymous","C6I Y39M T55K Y165I",4
"lib2","SARS-CoV-2","CCAAAGCACAAGGTTG",5,9.85,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13E W106Y Q144M Q176T K198M",5
"lib2","SARS-CoV-2","CCAAAGCATCTATATA",2,55.69,10.77,-0.07,0.07,2.97,1.06,0,">1 nonsynonymous","V37N N151H",2
"lib2","SARS-CoV-2","CCAAAGCCCTACATCT",13,189.63,10.32,-0.51,0.04,2.85,1.07,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","CCAAAGCCGTATGATA",2,17.33,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","R73A S139I L162P",3
"lib2","SARS-CoV-2","CCAAAGCCTAACACTA",2,26.21,10.39,-0.45,0.06,2.94,1.05,0,">1 nonsynonymous","I2S G51R T63G Q144S",4
"lib2","SARS-CoV-2","CCAAAGCGGATAACAG",7,30.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G83Y Y93L W106S",3
"lib2","SARS-CoV-2","CCAAAGCTTGTCTACC",1,61.56,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C49L D68R G116I F167P",4
"lib2","SARS-CoV-2","CCAAAGGAAAACTAAT",6,33.7,9.14,-1.7,0.24,1.5,1.13,0.03,">1 nonsynonymous","G9V A14R K128Y E135N",4
"lib2","SARS-CoV-2","CCAAAGGAAACACTAA",8,57.14,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C49H A89V G172Q",3
"lib2","SARS-CoV-2","CCAAAGGATATATGTA",7,33.68,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","CCAAAGGCACGCCACA",4,97.57,10.21,-0.63,0.03,2.97,1.03,0,">1 nonsynonymous","E154V T201R",2
"lib2","SARS-CoV-2","CCAAAGGCTAGATTTT",3,50.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A105H G117K",2
"lib2","SARS-CoV-2","CCAAAGGCTGAACATC",3,37.77,10.1,-0.73,0.06,2.77,1,0,">1 nonsynonymous","V37S V52A A81Q",3
"lib2","SARS-CoV-2","CCAAAGGCTTATGTCG",7,3.97,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","CCAAAGGGCATTCCCG",4,36.36,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A22T F44S G172D",3
"lib2","SARS-CoV-2","CCAAAGGTAATCCTCT",3,14.79,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Y39L L60K D98H F167V",4
"lib2","SARS-CoV-2","CCAAAGTAAACTGACC",2,16.78,9.63,-1.21,0.19,1.91,1,0.02,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","CCAAAGTACCAAAATA",7,36.89,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R124P C195H",2
"lib2","SARS-CoV-2","CCAAAGTCCCTTGAAT",1,26,10.75,-0.09,0.06,3,1.01,0,">1 nonsynonymous","C61R S139N",2
"lib2","SARS-CoV-2","CCAAAGTCGCCGTACT",2,25.28,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","L5F T15I I88Q",3
"lib2","SARS-CoV-2","CCAAAGTGGTTACAAG",5,22.4,6.08,-4.76,0.93,1.5,1.23,0.02,">1 nonsynonymous","F44L P54E N64W D97N A145V P149L N171C",7
"lib2","SARS-CoV-2","CCAAAGTTAAGCACGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","CCAAAGTTCATAATAA",2,5.68,6.05,-4.79,2,1.5,1.2,0.04,">1 nonsynonymous","V71M I88W T100P",3
"lib2","SARS-CoV-2","CCAAAGTTGAAACACA",14,295.45,10.76,-0.08,0.03,2.96,1.05,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","CCAAAGTTGATATCAG",7,215.4,10.69,-0.14,0.05,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAATAAAACGCGGT",5,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D T63A A89S S113L",4
"lib2","SARS-CoV-2","CCAAATAAGCGCCATA",4,30.18,10.74,-0.09,0.06,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAAATAATGGGTTAT",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72K T85Q W106G S184P T201R",5
"lib2","SARS-CoV-2","CCAAATACAACGAATA",4,14.63,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y91T C150S V181C V194I",4
"lib2","SARS-CoV-2","CCAAATACGTTGACTC",2,10.28,9.15,-1.69,0.11,2.2,1.01,0.01,"1 nonsynonymous","Y165N",1
"lib2","SARS-CoV-2","CCAAATAGAAAAAACT",2,12.83,9.91,-0.93,0.06,3,1,0,">1 nonsynonymous","G9T S129R E154V",3
"lib2","SARS-CoV-2","CCAAATAGACCAAACT",1,9.22,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","W23M P161S",2
"lib2","SARS-CoV-2","CCAAATAGCAGACCAT",3,0.45,NA,NA,NA,NA,NA,NA,"stop","S36* K87C",2
"lib2","SARS-CoV-2","CCAAATAGGAAGATCC",10,79.31,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","P54T R127V S139R",3
"lib2","SARS-CoV-2","CCAAATAGGACATGAG",2,26.68,6,-4.84,1.68,1.5,1.08,0.01,">1 nonsynonymous","G9R F134R C150A",3
"lib2","SARS-CoV-2","CCAAATAGTAAACCAG",1,1.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","CCAAATAGTAACACAC",5,47.84,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F70E T85S Q144K P161E",4
"lib2","SARS-CoV-2","CCAAATAGTACTTTTT",1,1.08,NA,NA,NA,NA,NA,NA,"stop","A22V C61* G116S G172Q",4
"lib2","SARS-CoV-2","CCAAATAGTAGATCTG",3,79.51,10.61,-0.23,0.04,2.87,1.12,0,"1 nonsynonymous","S184R",1
"lib2","SARS-CoV-2","CCAAATATCACAGACA",16,114.58,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1M F12Y A42K Y91L Y123S G146M",6
"lib2","SARS-CoV-2","CCAAATATCACAGGCA",2,88.52,10.82,-0.02,0.06,2.89,1.08,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","CCAAATATGATGCTCC",2,190.05,9.65,-1.18,0.07,2.8,1.1,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","CCAAATCAACATCGTC",15,373.39,10.46,-0.37,0.03,2.9,1.06,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","CCAAATCACAATGTAC",2,7.25,9.15,-1.68,0.17,2.96,1.09,0.01,"1 nonsynonymous","R73G",1
"lib2","SARS-CoV-2","CCAAATCCCCGGTCTT",2,38.9,9.43,-1.41,0.08,2.01,1.06,0,">1 nonsynonymous","Y21C C61L",2
"lib2","SARS-CoV-2","CCAAATCTATTTCCGG",3,9.94,9.16,-1.68,0.23,1.84,1.13,0.02,">1 nonsynonymous","P7I V11Y S29L",3
"lib2","SARS-CoV-2","CCAAATCTCCCACTCA",5,118.48,9.58,-1.25,0.03,2.92,1.09,0,">1 nonsynonymous","F126M I142P",2
"lib2","SARS-CoV-2","CCAAATCTCTTCCAAC",5,96.09,10.34,-0.5,0.07,2.75,1.16,0,">1 nonsynonymous","R16M C61F",2
"lib2","SARS-CoV-2","CCAAATGACACCACAT",16,96.92,6.06,-4.78,0.65,1.5,1.2,0.01,"1 nonsynonymous","I88K",1
"lib2","SARS-CoV-2","CCAAATGATACTGTAG",1,60.1,9.9,-0.93,0.06,2.09,1.03,0,">1 nonsynonymous","T55G C61E E76V L188P",4
"lib2","SARS-CoV-2","CCAAATGATGGACATT",10,84.19,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5R R25K I104M P133W P161W S184V",6
"lib2","SARS-CoV-2","CCAAATGCACCCTAAT",3,56.36,10.52,-0.31,0.04,2.98,1,0,">1 nonsynonymous","S19A A42E",2
"lib2","SARS-CoV-2","CCAAATGCGTACACGA",3,44.34,9.24,-1.59,0.07,2.96,1.07,0,">1 nonsynonymous","L60K G166Q",2
"lib2","SARS-CoV-2","CCAAATGGCAATATAC",6,4.59,NA,NA,NA,NA,NA,NA,"stop","P7I C49V C61* D90G N151P S184Q",6
"lib2","SARS-CoV-2","CCAAATGGCTAAAGAC",10,85.7,7.58,-3.26,0.25,1.5,1.12,0.02,">1 nonsynonymous","V52S Q144L",2
"lib2","SARS-CoV-2","CCAAATGTACGGTACC",1,27.13,9.51,-1.32,0.05,2.94,1.08,0,">1 nonsynonymous","T15E I28W N110Q G146N",4
"lib2","SARS-CoV-2","CCAAATGTCAGACCGG",3,45.92,10.93,0.1,0.04,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAATGTGGCCTCTA",5,18.74,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I104T C150T",2
"lib2","SARS-CoV-2","CCAAATTACACGCTTG",12,173.18,8.52,-2.32,0.08,1.98,1.07,0,"1 nonsynonymous","F167M",1
"lib2","SARS-CoV-2","CCAAATTACATCTCCG",1,16.61,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D59A L95Y S129K",3
"lib2","SARS-CoV-2","CCAAATTACATTTAGC",7,60.32,10.29,-0.54,0.07,2.84,1.09,0,">1 nonsynonymous","T85I S139G",2
"lib2","SARS-CoV-2","CCAAATTAGTGCACAC",14,3.42,NA,NA,NA,NA,NA,NA,"stop","Y35N L57Y D98*",3
"lib2","SARS-CoV-2","CCAAATTAGTTTCCTT",6,53.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7S D59A D112A V115M Y143G F156P",6
"lib2","SARS-CoV-2","CCAAATTATCCGGATC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","C31* F44S K87G N130V V173T",5
"lib2","SARS-CoV-2","CCAAATTTCCGACCAT",1,6.63,8.3,-2.54,0.27,2.53,1,0.04,">1 nonsynonymous","A67V L125R V153E Q168R",4
"lib2","SARS-CoV-2","CCAAATTTTTGGCTTG",3,41.87,9.93,-0.9,0.1,2.07,1.06,0.01,">1 nonsynonymous","T15I Y91N",2
"lib2","SARS-CoV-2","CCAACAAAAAACACAA",7,87.31,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L57T G86T F99E Y165L",4
"lib2","SARS-CoV-2","CCAACAAAAACAAGGA",1,18.9,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I28T F44I P54L D137T",4
"lib2","SARS-CoV-2","CCAACAAACACCTCCA",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T K48S R73S S139K",4
"lib2","SARS-CoV-2","CCAACAAACAGAGTCA",6,145.59,10.86,0.03,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACAAACCAAACAC",3,0,NA,NA,NA,NA,NA,NA,"stop","C31E I80T G83I N110V G155I Q176* P197V",7
"lib2","SARS-CoV-2","CCAACAAACCCGAGAA",5,70.2,10.87,0.03,0.06,3,1.03,0,"1 nonsynonymous","V153N",1
"lib2","SARS-CoV-2","CCAACAAACCTGAGTG",5,255.73,6.14,-4.7,0.87,1.5,1.2,0.02,">1 nonsynonymous","K87H K94L I142F F160T",4
"lib2","SARS-CoV-2","CCAACAAATAGGTATT",2,12.59,10.82,-0.01,0.1,3,1.03,0,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","CCAACAAATATATCTT",20,175.15,8.56,-2.27,0.11,2.94,1.11,0,">1 nonsynonymous","L122M T148V G166D",3
"lib2","SARS-CoV-2","CCAACAAATGAATGCG",5,81.46,7.67,-3.16,0.16,1.5,1.07,0.01,">1 nonsynonymous","P7S F17I A33P K87S Y119S S200A",6
"lib2","SARS-CoV-2","CCAACAACAAAAACAT",8,56.54,6,-4.84,2,2.52,1.13,0,">1 nonsynonymous","C49I G101L K199G",3
"lib2","SARS-CoV-2","CCAACAACCACGTAAA",2,31.77,8.27,-2.57,0.1,2.27,1.03,0,">1 nonsynonymous","S53C D112L",2
"lib2","SARS-CoV-2","CCAACAAGCTTCCCAT",2,47.76,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I2L G9H C150W Y165I",4
"lib2","SARS-CoV-2","CCAACAAGTTTCGTGC",3,45.42,10.75,-0.08,0.05,2.99,1.03,0,">1 nonsynonymous","G83M T140R",2
"lib2","SARS-CoV-2","CCAACAATAGACAGAC",4,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93T G117Y",2
"lib2","SARS-CoV-2","CCAACAATCAAATGAA",10,165.06,10.88,0.04,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACAATCATCCATG",12,126.45,6.96,-3.87,0.22,1.5,1.12,0.01,">1 nonsynonymous","N118W T170L",2
"lib2","SARS-CoV-2","CCAACAATTTTGCCAA",1,77.96,10.82,-0.01,0.06,2.91,1.11,0,">1 nonsynonymous","G9Q K198R",2
"lib2","SARS-CoV-2","CCAACACAAACTATCT",5,6.51,7.09,-3.74,0.65,1.5,1.03,0.06,">1 nonsynonymous","T55P V71L A105L D112S G172W G174V",6
"lib2","SARS-CoV-2","CCAACACACCGCCGTG",7,64.49,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A18M Y39L P54M I104R K128I",5
"lib2","SARS-CoV-2","CCAACACACCTCTCCC",4,1.05,NA,NA,NA,NA,NA,NA,"stop","C61V F70T P149* K198*",4
"lib2","SARS-CoV-2","CCAACACAGACAGTGC",5,21.09,8.59,-2.25,0.23,1.91,1.15,0.03,">1 nonsynonymous","N4T S41L R136P",3
"lib2","SARS-CoV-2","CCAACACCAGATAAAT",4,15.41,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","I88M P96F G116W F167K",4
"lib2","SARS-CoV-2","CCAACACCTAATGAAT",5,44.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5H K26V D68L",3
"lib2","SARS-CoV-2","CCAACACCTACATGAA",11,31.62,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C6V C61T G86M D97I W106A S113V R136K F160D T201V",9
"lib2","SARS-CoV-2","CCAACACTCTAAGCCG",19,119.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P82V Y121M P169Y",3
"lib2","SARS-CoV-2","CCAACACTTAAAATAC",16,126.9,10.83,-0.01,0.04,2.93,1.08,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CCAACACTTTAAATTT",7,37.81,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D90N D112N R127K",3
"lib2","SARS-CoV-2","CCAACAGAACTTTACC",2,6.56,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","C6F R25I C49G A89Y A105F R124N",6
"lib2","SARS-CoV-2","CCAACAGACATACTCT",11,101.81,8.65,-2.19,0.08,2.78,1.14,0,"1 nonsynonymous","Y143C",1
"lib2","SARS-CoV-2","CCAACAGAGAGTAAAC",7,608.87,10.8,-0.04,0.04,2.94,1.08,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","CCAACAGAGTGTATCT",3,128.41,9.53,-1.31,0.08,2.66,1.03,0,"1 nonsynonymous","Y121T",1
"lib2","SARS-CoV-2","CCAACAGCACAACTCC",6,21.16,8.14,-2.7,0.15,1.62,1.03,0.01,"1 nonsynonymous","D112H",1
"lib2","SARS-CoV-2","CCAACAGCATCATTAG",2,21.17,10.95,0.12,0.07,3,1,0,">1 nonsynonymous","N1K R27V P54E",3
"lib2","SARS-CoV-2","CCAACAGCGAACGTAC",7,16.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K132L T170M L183G",3
"lib2","SARS-CoV-2","CCAACAGGACAATCCG",3,71.12,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35L A42T G116L F167I",4
"lib2","SARS-CoV-2","CCAACAGGCACTTCCG",4,24.34,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F17R K48I I72S",3
"lib2","SARS-CoV-2","CCAACAGGGCACTACA",5,52.03,9.49,-1.34,0.27,1.5,1.02,0.04,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","CCAACAGGTGTCATCT",1,11.88,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","I2T K26R C49T K56L F62T Y93V N107F",7
"lib2","SARS-CoV-2","CCAACAGTTAAATCCA",4,12.04,NA,NA,NA,NA,NA,NA,"stop","R16T L131* G152K",3
"lib2","SARS-CoV-2","CCAACAGTTGATAGGT",3,13.14,6,-4.84,1.4,3,1.32,0.01,">1 nonsynonymous","L5A S43V T85L D137F",4
"lib2","SARS-CoV-2","CCAACATAGGGACTTG",1,9.15,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15G W23L T55F I138K",4
"lib2","SARS-CoV-2","CCAACATATATCTGTA",3,23.65,8.94,-1.9,0.12,2.64,1.06,0.01,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","CCAACATCCGACCACT",12,66.65,6.25,-4.59,0.67,1.5,1.16,0.02,">1 nonsynonymous","C6F I138F C158R",3
"lib2","SARS-CoV-2","CCAACATCTGGGCGAA",1,7.3,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V103K F126Q",2
"lib2","SARS-CoV-2","CCAACATCTTTACCTT",2,25.05,10.22,-0.61,0.05,3,1,0,">1 nonsynonymous","S36W S41L T63A",3
"lib2","SARS-CoV-2","CCAACATCTTTGAAAA",2,71.55,6.1,-4.73,0.78,1.5,1.13,0.01,"1 nonsynonymous","C158W",1
"lib2","SARS-CoV-2","CCAACATCTTTTCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","P54R C61* F167L",3
"lib2","SARS-CoV-2","CCAACATGAAGCCCGT",7,17.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68V K87G P96T F134P",4
"lib2","SARS-CoV-2","CCAACATGTCCATAAC",2,74.64,10.2,-0.64,0.04,2.82,1.01,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","CCAACATGTTTCTAAG",3,42.31,9.33,-1.51,0.12,1.86,1.07,0.01,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","CCAACATTGATGAAGT",9,84.08,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L131T C158V T201A",3
"lib2","SARS-CoV-2","CCAACATTTAATGAAC",8,29.27,6.37,-4.47,0.44,1.5,1.12,0.01,">1 nonsynonymous","N4V K56M T100S L125S Q144M F167Q L183V",7
"lib2","SARS-CoV-2","CCAACCAAAAACCAAG",5,42.14,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35R F70L Q84R F167A T201K",5
"lib2","SARS-CoV-2","CCAACCAACGAAATTA",3,19.39,6,-4.84,1.85,1.5,1.12,0.01,">1 nonsynonymous","F70R P149Q",2
"lib2","SARS-CoV-2","CCAACCAACGCCGCGT",5,59.35,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2D G83D I88S I104L S129L",5
"lib2","SARS-CoV-2","CCAACCAATGCAAACA",9,97.79,9.17,-1.67,0.13,1.57,1.1,0.01,">1 nonsynonymous","S69K Q144S",2
"lib2","SARS-CoV-2","CCAACCACAAAATAAT",1,9.79,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","C49R L60K Y91V L162F",4
"lib2","SARS-CoV-2","CCAACCACCCGCTTAG",1,7.26,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A18Y G101N Y143W",3
"lib2","SARS-CoV-2","CCAACCAGAAACAAAA",1,46.9,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","N107G R136V C158K",3
"lib2","SARS-CoV-2","CCAACCAGACTACTTT",2,44,10.81,-0.02,0.05,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACCATATCCATTC",5,107.5,10.31,-0.53,0.06,2.82,1.11,0,">1 nonsynonymous","V173S P197S",2
"lib2","SARS-CoV-2","CCAACCATTACTTCTT",22,371.68,7.23,-3.61,0.11,1.81,1.13,0,"1 nonsynonymous","C150D",1
"lib2","SARS-CoV-2","CCAACCATTACTTTAT",9,222.45,10.18,-0.66,0.03,2.79,1.04,0,">1 nonsynonymous","D97A K128L Q144S",3
"lib2","SARS-CoV-2","CCAACCATTTGTACAC",4,0.03,NA,NA,NA,NA,NA,NA,"stop","S45Y L60*",2
"lib2","SARS-CoV-2","CCAACCCAACTTGTCG",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T L60F R124S Q144L A190N",5
"lib2","SARS-CoV-2","CCAACCCAGACGCCCC",6,81.72,7.18,-3.66,0.19,1.5,1.06,0.01,">1 nonsynonymous","N4S D137F G155S",3
"lib2","SARS-CoV-2","CCAACCCCAAAATGCT",1,19.36,8.57,-2.27,0.22,1.5,1.04,0.02,">1 nonsynonymous","G51N I104K",2
"lib2","SARS-CoV-2","CCAACCCCAAAGTTTA",5,44.76,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6W V103S",2
"lib2","SARS-CoV-2","CCAACCCCCGAAGAAT",10,2.37,NA,NA,NA,NA,NA,NA,"stop","Y35* L60Q P169Q",3
"lib2","SARS-CoV-2","CCAACCCCTTAAGTTT",2,2.41,NA,NA,NA,NA,NA,NA,"stop","T100* S139* S200V",3
"lib2","SARS-CoV-2","CCAACCCCTTCAAAAA",3,8.79,10.77,-0.06,0.08,2.78,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACCGAACGATGAT",5,125.13,9.51,-1.33,0.04,2.76,1.1,0,">1 nonsynonymous","A33C K56F E154L",3
"lib2","SARS-CoV-2","CCAACCGATCCAAACA",14,106.72,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","V11D R124C",2
"lib2","SARS-CoV-2","CCAACCGCGAATAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A14D L60P I88L S113G D137G E186V",7
"lib2","SARS-CoV-2","CCAACCGGAAGTTATA",19,162.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C31G A33T V115D C150K",4
"lib2","SARS-CoV-2","CCAACCGGCAAACAAA",2,9.09,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","V103A K132Y T140R",3
"lib2","SARS-CoV-2","CCAACCGGCCGAACAC",1,18.02,7.82,-3.02,0.39,1.5,1,0.04,">1 nonsynonymous","Y91S F99Y",2
"lib2","SARS-CoV-2","CCAACCGGTACCCTCA",2,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T D59Y Y91V R127T E141S",5
"lib2","SARS-CoV-2","CCAACCTATCAACAAA",5,11.09,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","N92Y F99Y D137R C195Y",4
"lib2","SARS-CoV-2","CCAACCTCGCTACAAG",2,41.86,6.93,-3.91,0.31,1.5,1.12,0.02,">1 nonsynonymous","D68V K114N",2
"lib2","SARS-CoV-2","CCAACCTGAAATTGGG",5,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I N107F",2
"lib2","SARS-CoV-2","CCAACCTGACCGATAA",2,755.75,10.67,-0.17,0.02,2.95,1.04,0,"1 nonsynonymous","S147F",1
"lib2","SARS-CoV-2","CCAACCTGCCTTGTGA",6,40.7,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A89T F134G C150L G174W",4
"lib2","SARS-CoV-2","CCAACCTTATAGTGCT",1,20.07,9.26,-1.57,0.14,1.83,1.05,0.01,">1 nonsynonymous","T46L I104S N130I S184F",4
"lib2","SARS-CoV-2","CCAACCTTTCACAATG",5,120.07,10.85,0.01,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACGAACATGATTT",15,124.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6L S36N Y50S F134E T170C",5
"lib2","SARS-CoV-2","CCAACGACATGACGTC",14,54.23,8.78,-2.06,0.25,1.5,1.04,0.02,">1 nonsynonymous","K56S D97N W106K G174W",4
"lib2","SARS-CoV-2","CCAACGACATGCAGTT",7,23.89,6,-4.84,1.66,1.5,1.27,0.03,">1 nonsynonymous","D34L S45A C102S N120S Y143E",5
"lib2","SARS-CoV-2","CCAACGACTGTTGCTA",2,42.27,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y66V F167T",2
"lib2","SARS-CoV-2","CCAACGAGATAATGTG",8,2.28,NA,NA,NA,NA,NA,NA,"stop","N1E R16M N40D N107Y G152L N157*",6
"lib2","SARS-CoV-2","CCAACGATCCTAAAAT",4,66.39,10.89,0.06,0.07,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACGATGATCTTAT",3,57.69,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C102L R127E P149N",3
"lib2","SARS-CoV-2","CCAACGATTAAAAATT",2,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F12R A33I G83M G86Y F160C",6
"lib2","SARS-CoV-2","CCAACGCATCAACCAT",3,23.05,7.77,-3.07,0.2,1.5,1.07,0.01,">1 nonsynonymous","D59M L162N T201W",3
"lib2","SARS-CoV-2","CCAACGCGGGAGCATA",4,44.72,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G83S K132G N157I V182Y",4
"lib2","SARS-CoV-2","CCAACGCTCCGAACAT",6,45.85,10.56,-0.28,0.07,2.86,1.11,0,">1 nonsynonymous","L5M S36L I72L",3
"lib2","SARS-CoV-2","CCAACGGGAACCTGTA",6,0.98,NA,NA,NA,NA,NA,NA,"stop","V37* N58P F62S Y119N N151K",5
"lib2","SARS-CoV-2","CCAACGGGTCCGCAAG",2,15.81,9.85,-0.99,0.1,2.72,1.06,0.01,">1 nonsynonymous","G83I S147A",2
"lib2","SARS-CoV-2","CCAACGTAATTGACAT",1,62.2,10.74,-0.1,0.03,2.96,1.05,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","CCAACGTCGCACAGAG",3,25.55,10.91,0.08,0.06,2.94,1.07,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CCAACGTCTAAAGACC",21,396.45,10.73,-0.1,0.05,2.9,1.11,0,">1 nonsynonymous","C61S T100I",2
"lib2","SARS-CoV-2","CCAACGTCTAAGTGTG",9,70.73,9.67,-1.17,0.08,2.12,1.08,0,">1 nonsynonymous","C61L R136A",2
"lib2","SARS-CoV-2","CCAACGTCTAGATTCC",2,28.63,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","CCAACGTCTCTGTACG",12,216.3,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5N C61K I88A S139K",4
"lib2","SARS-CoV-2","CCAACTAAAACTATGC",4,29.95,8.64,-2.2,0.31,1.5,1,0.06,">1 nonsynonymous","Y121V S139F K199D",3
"lib2","SARS-CoV-2","CCAACTAACTGTTCGC",2,18.76,9.39,-1.44,0.23,1.67,1.03,0.05,">1 nonsynonymous","I2P T15N Y39I S53L A105S S139H",6
"lib2","SARS-CoV-2","CCAACTAAGCAAAAGA",22,352.79,8.9,-1.94,0.06,2.94,1.1,0,"1 nonsynonymous","F126K",1
"lib2","SARS-CoV-2","CCAACTAAGTCGAATT",3,59.01,8.46,-2.38,0.18,2.56,1.09,0.01,">1 nonsynonymous","P96G Y175S",2
"lib2","SARS-CoV-2","CCAACTAATGACTAAA",3,12.75,9.76,-1.07,0.13,2.48,1,0.01,">1 nonsynonymous","A18H K56L N110G G152F",4
"lib2","SARS-CoV-2","CCAACTAATTAAATGC",17,64.44,6,-4.84,2,1.5,1.24,0.03,"1 nonsynonymous","Y93L",1
"lib2","SARS-CoV-2","CCAACTACAACAAAAA",3,34.58,9.76,-1.07,0.11,2.23,1,0.01,">1 nonsynonymous","P7V Y91N S139T",3
"lib2","SARS-CoV-2","CCAACTACCGAAAACA",1,17.65,6,-4.84,2,3,1.11,0,"1 nonsynonymous","E76P",1
"lib2","SARS-CoV-2","CCAACTATTAGGGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100K A105D T148S N157D Q163L A190F",6
"lib2","SARS-CoV-2","CCAACTATTATAGTAG",8,139.84,10.84,0,0.05,2.92,1.09,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","CCAACTCAAACAGTGA",1,5.21,NA,NA,NA,NA,NA,NA,"stop","T100E N157*",2
"lib2","SARS-CoV-2","CCAACTCAACAAATCC",4,41.55,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A14C C49R L111S C150Y",4
"lib2","SARS-CoV-2","CCAACTCAACATCAGC",12,54.96,6.48,-4.36,0.56,1.5,1.23,0.03,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","CCAACTCACTAAAAAT",1,21.18,10.9,0.07,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAACTCCCTCCAAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","V32R R124P N130* Q163C",4
"lib2","SARS-CoV-2","CCAACTCGTTGGTATA",10,129.91,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","I2T G86S I138N Y143R C195Y",5
"lib2","SARS-CoV-2","CCAACTCTTACAAACA",4,109.63,8.4,-2.44,0.12,3,1.1,0.01,">1 nonsynonymous","V37M F126N",2
"lib2","SARS-CoV-2","CCAACTCTTTAATCTA",9,81.61,8.75,-2.08,0.37,1.5,1,0.06,"1 nonsynonymous","N92M",1
"lib2","SARS-CoV-2","CCAACTGCCATACAAG",4,10.43,9.68,-1.15,0.13,2.47,1,0.01,">1 nonsynonymous","I2C F12Q S41T G152R T201Q",5
"lib2","SARS-CoV-2","CCAACTGCCTCTGAAA",22,275.43,7.9,-2.93,0.11,1.5,1.07,0,">1 nonsynonymous","A89F Y119T",2
"lib2","SARS-CoV-2","CCAACTGCGAAATTTT",5,31.45,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","C6S C158Q G166M",3
"lib2","SARS-CoV-2","CCAACTGCGACTACAC",2,3.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138C",1
"lib2","SARS-CoV-2","CCAACTGCTGCTACCA",1,9.87,9.99,-0.84,0.09,2.95,1,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","CCAACTGGGGACAAAA",6,51.29,10.73,-0.11,0.04,3,1.01,0,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","CCAACTGGTTAAGGCG",1,33.49,7.68,-3.16,0.19,1.5,1,0.01,">1 nonsynonymous","V37T W106G N157D",3
"lib2","SARS-CoV-2","CCAACTGTACTGAATA",15,70.67,6.01,-4.82,0.77,1.5,1.15,0.01,">1 nonsynonymous","F12C C49I T100F Q144R",4
"lib2","SARS-CoV-2","CCAACTGTATTAAACA",5,108.93,10.23,-0.61,0.04,2.77,1.07,0,">1 nonsynonymous","D90F I104V V173I",3
"lib2","SARS-CoV-2","CCAACTTAATATAACT",9,43.08,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","L60D G146L L162I",3
"lib2","SARS-CoV-2","CCAACTTGATAAAACA",8,70.53,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I80A D90Y",2
"lib2","SARS-CoV-2","CCAACTTGTACTGGTA",11,98.77,10.37,-0.47,0.04,2.87,1.03,0,"1 nonsynonymous","N40V",1
"lib2","SARS-CoV-2","CCAACTTTAATCTCAG",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C P161L",2
"lib2","SARS-CoV-2","CCAACTTTCCTACAAT",7,44.72,10.8,-0.03,0.05,2.93,1.08,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","CCAACTTTGAGAAATA",2,59.29,10.67,-0.16,0.04,2.9,1.09,0,">1 nonsynonymous","L122Y E135M",2
"lib2","SARS-CoV-2","CCAACTTTTGACCAGA",16,119.39,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C6A K26M D34G C49H K94C",5
"lib2","SARS-CoV-2","CCAAGAAACACATCGA",11,208.59,10.6,-0.23,0.03,2.94,1.06,0,">1 nonsynonymous","G155S V173F",2
"lib2","SARS-CoV-2","CCAAGAAAGCAGAAAA",5,54.69,6.25,-4.58,0.36,2.47,1.17,0,">1 nonsynonymous","F47N E154C P169N",3
"lib2","SARS-CoV-2","CCAAGAAAGCCCAGAG",3,28.26,8,-2.84,0.18,1.52,1.08,0.01,">1 nonsynonymous","K56S N107I L183I K199Y",4
"lib2","SARS-CoV-2","CCAAGAAATAAAGGGC",1,1.15,NA,NA,NA,NA,NA,NA,"stop","D59K G166*",2
"lib2","SARS-CoV-2","CCAAGAAATAAGCACA",3,34.7,7.78,-3.05,0.3,1.5,1.04,0.04,">1 nonsynonymous","R16K A33G V103L",3
"lib2","SARS-CoV-2","CCAAGAAATATAATGG",1,6.3,10.88,0.04,0.07,2.98,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAAGAACCAACCTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","A81M K94*",2
"lib2","SARS-CoV-2","CCAAGAACGCTTACAT",2,30.53,10.21,-0.63,0.1,2.75,1.03,0,">1 nonsynonymous","I2S V52N",2
"lib2","SARS-CoV-2","CCAAGAACGGAGATAG",1,0.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198C",1
"lib2","SARS-CoV-2","CCAAGAACGTTTTACT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","F44L F70* L187V",3
"lib2","SARS-CoV-2","CCAAGAACTTACACTT",11,157.67,10.78,-0.06,0.05,2.95,1.07,0,"1 nonsynonymous","P7E",1
"lib2","SARS-CoV-2","CCAAGAAGTATTTTAA",4,1.06,NA,NA,NA,NA,NA,NA,"stop","C61K P149* H189M",3
"lib2","SARS-CoV-2","CCAAGAATAACAAACA",11,68.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S41V D112N N151D G174L",4
"lib2","SARS-CoV-2","CCAAGACAAACACATA",1,12.04,10.83,-0.01,0.11,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAGACACATAGTCA",3,26.92,6,-4.84,1.74,3,1.09,0,">1 nonsynonymous","V115A R124L C195S",3
"lib2","SARS-CoV-2","CCAAGACACCAAACGC",1,24.94,10.05,-0.78,0.1,2.63,1,0.01,">1 nonsynonymous","T15L D34Y S129R",3
"lib2","SARS-CoV-2","CCAAGACACCAAGTCT",13,150.04,8.46,-2.37,0.13,2.6,1.04,0.01,">1 nonsynonymous","S36I L60H L122H Y175S",4
"lib2","SARS-CoV-2","CCAAGACAGTCTGACC",2,9.33,6,-4.84,2,3,1.07,0,">1 nonsynonymous","N24W Y143S S147A",3
"lib2","SARS-CoV-2","CCAAGACATAGGTAAG",1,41.2,8.02,-2.82,0.23,1.62,1.14,0.02,">1 nonsynonymous","S43L N64L K87N N120Y N157H",5
"lib2","SARS-CoV-2","CCAAGACCGATACACC",7,14.8,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","C150V E186V",2
"lib2","SARS-CoV-2","CCAAGACTAAGTACAA",2,10.84,7.92,-2.92,0.23,1.5,1,0.02,">1 nonsynonymous","L95T D112M",2
"lib2","SARS-CoV-2","CCAAGACTAAGTTCTA",2,13.89,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S36D D68L G174V T201R",4
"lib2","SARS-CoV-2","CCAAGACTAGACAAAG",7,80.46,9.22,-1.61,0.08,2.95,1.11,0,">1 nonsynonymous","Y119H N151T",2
"lib2","SARS-CoV-2","CCAAGAGACCCACCAC",4,48.7,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3N A18L L38S F44T Y91L L188H",6
"lib2","SARS-CoV-2","CCAAGAGACCCCGTTT",3,64.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16S Y93N N130T P149K",4
"lib2","SARS-CoV-2","CCAAGAGAGGCCTTTT",4,95.67,10.79,-0.05,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAGAGGGACCCAAA",9,86.26,10.12,-0.71,0.06,2.57,1.04,0,">1 nonsynonymous","V65R Q84R A192E",3
"lib2","SARS-CoV-2","CCAAGAGTAAACTCGC",6,29.12,9.17,-1.67,0.27,1.89,1.08,0.03,">1 nonsynonymous","F12D A42L L122S",3
"lib2","SARS-CoV-2","CCAAGAGTATAATCCC",6,54.73,9.42,-1.42,0.16,1.85,1.05,0.01,">1 nonsynonymous","T3S F44S Y123A P149H V173K",5
"lib2","SARS-CoV-2","CCAAGATAAGCTATAT",8,160.31,9.46,-1.37,0.09,2.17,1.06,0,">1 nonsynonymous","N4V Y121I K128L",3
"lib2","SARS-CoV-2","CCAAGATAAGGAGTGG",2,28.89,10.83,-0.01,0.06,3,1.03,0,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","CCAAGATAGTACTTGT",15,167.1,9.89,-0.94,0.08,2.24,1.02,0,">1 nonsynonymous","N1Q F17I A42P",3
"lib2","SARS-CoV-2","CCAAGATATTAACATT",1,16.4,6,-4.84,2,3,1.1,0,">1 nonsynonymous","W23S Y119L Q144F",3
"lib2","SARS-CoV-2","CCAAGATCAATATAAC",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105S F134L G146R",3
"lib2","SARS-CoV-2","CCAAGATCCCGTTAAA",1,53.42,9.98,-0.85,0.17,2.12,1.08,0.01,">1 nonsynonymous","Q84R D90Y K128T P149Q",4
"lib2","SARS-CoV-2","CCAAGATCTAAATGCA",3,21.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93L N120S Q168S",3
"lib2","SARS-CoV-2","CCAAGATGCATATATG",9,179.05,10.81,-0.02,0.04,2.94,1.08,0,">1 nonsynonymous","N1F T55E",2
"lib2","SARS-CoV-2","CCAAGATGTCTGTGAT",2,18.53,10.2,-0.64,0.08,2.9,1,0,">1 nonsynonymous","S45L K198L",2
"lib2","SARS-CoV-2","CCAAGATTACATTTTC",5,10.93,6.09,-4.74,2,1.5,1.12,0.01,">1 nonsynonymous","N4I T63H W106A R124N",4
"lib2","SARS-CoV-2","CCAAGATTCGAATCTA",5,2.8,NA,NA,NA,NA,NA,NA,"stop","Y50T T85* L188W",3
"lib2","SARS-CoV-2","CCAAGCAAGTTATAAA",2,7.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V G155W F167W K198Y",4
"lib2","SARS-CoV-2","CCAAGCACATAACTTA",10,162.82,10.74,-0.1,0.04,2.99,1.04,0,"1 nonsynonymous","K128M",1
"lib2","SARS-CoV-2","CCAAGCACATTTTCAA",10,49.71,6,-4.84,2,3,1.28,0,">1 nonsynonymous","S19L I138F T148A Q168L",4
"lib2","SARS-CoV-2","CCAAGCACGCCGATAA",5,7.31,6.44,-4.4,0.15,2.44,1.02,0,">1 nonsynonymous","Y35I C61K D90L V180W",4
"lib2","SARS-CoV-2","CCAAGCATAAAGAGAC",7,6.25,6.08,-4.76,1.24,3,1,0,">1 nonsynonymous","I2G T15F A33M R124N C158L",5
"lib2","SARS-CoV-2","CCAAGCATAAGACACT",1,5.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V A81N G116V K128G C158T Q168H",6
"lib2","SARS-CoV-2","CCAAGCCCAAGCATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K P54R P96M I138S",4
"lib2","SARS-CoV-2","CCAAGCCCACATAAGT",3,30.02,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","A18T W106C I142S",3
"lib2","SARS-CoV-2","CCAAGCCCACTCTAAG",1,38.43,6.31,-4.53,0.45,1.5,1.1,0.01,">1 nonsynonymous","G86L K132L",2
"lib2","SARS-CoV-2","CCAAGCCCGAGAGACG",6,67.03,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10L D75H N130M Y143I G174F K199M",6
"lib2","SARS-CoV-2","CCAAGCCCGAGCCCTT",1,25.07,10.95,0.11,0.09,2.84,1.17,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CCAAGCCGTTGTAAAC",5,133.87,9.79,-1.04,0.06,2.12,1.07,0,">1 nonsynonymous","L38R T63A",2
"lib2","SARS-CoV-2","CCAAGCCTACTCAACG",6,22.49,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A42W G86I L95T K132T",4
"lib2","SARS-CoV-2","CCAAGCCTATCCAGAA",12,92.76,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14Y G83N A89L D112K",4
"lib2","SARS-CoV-2","CCAAGCCTGAACGCAA",1,15.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","CCAAGCGACCGTTTAC",3,21.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I G86V C102T A145C P197H",5
"lib2","SARS-CoV-2","CCAAGCGACGCTGATA",1,58.1,8.05,-2.79,0.22,1.6,1.08,0.03,">1 nonsynonymous","S41W D98N K128F P161T",4
"lib2","SARS-CoV-2","CCAAGCGGTATTCCCC",5,59.53,9.58,-1.25,0.07,2.83,1.08,0,">1 nonsynonymous","S41N E135G G146Q",3
"lib2","SARS-CoV-2","CCAAGCGGTTCACGGC",4,82.82,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G51I K56S S108Y V115L P149L T170E",6
"lib2","SARS-CoV-2","CCAAGCGTAGCCGGCT",4,42.27,9.78,-1.05,0.05,2.9,1.05,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","CCAAGCGTATTTAGCC",12,111.41,10.62,-0.21,0.03,2.92,1.08,0,"1 nonsynonymous","S139C",1
"lib2","SARS-CoV-2","CCAAGCTAGGCCTCGC",9,52.54,6.49,-4.35,0.48,1.5,1.15,0.02,">1 nonsynonymous","N107S Y121V V153F",3
"lib2","SARS-CoV-2","CCAAGCTAGTAAGAAA",3,40.46,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","C6S Y35L E141N P161R P197G",5
"lib2","SARS-CoV-2","CCAAGCTATACGGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N118* V153Q S200M",3
"lib2","SARS-CoV-2","CCAAGCTGTTACCATA",4,2.3,NA,NA,NA,NA,NA,NA,"stop","C61* T148G F160A",3
"lib2","SARS-CoV-2","CCAAGCTGTTGGAATC",4,58.78,9.69,-1.15,0.09,2.32,1.02,0,">1 nonsynonymous","G9L C61T V173S",3
"lib2","SARS-CoV-2","CCAAGCTTCCGAAAAG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E V181T",2
"lib2","SARS-CoV-2","CCAAGGAAAGACCCTG",4,12.9,8.86,-1.98,0.2,1.5,1.09,0.03,"1 nonsynonymous","F47E",1
"lib2","SARS-CoV-2","CCAAGGAACTTCGATA",3,14.55,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S45W N92A L162Q Q176T K199M",5
"lib2","SARS-CoV-2","CCAAGGAATTTGGCAG",7,63.91,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37T Y50C N64P K87P Y91S Y123M T140A",7
"lib2","SARS-CoV-2","CCAAGGACAGGCAAAC",7,12.03,10.12,-0.72,0.25,1.81,1.05,0.04,">1 nonsynonymous","T15R C49V T63D",3
"lib2","SARS-CoV-2","CCAAGGACCAAAGCAA",2,8.97,10.79,-0.05,0.12,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAAGGAGCTATGATA",5,31.43,9.91,-0.92,0.06,2.99,1,0,">1 nonsynonymous","A33W D97L Y165H",3
"lib2","SARS-CoV-2","CCAAGGAGGAGGCGAA",3,14.64,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","K56P G101M",2
"lib2","SARS-CoV-2","CCAAGGAGTCGCCCTT",13,51.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F167C T201V",2
"lib2","SARS-CoV-2","CCAAGGCAACGTAAAG",3,24.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139F P161F G174L K199A",4
"lib2","SARS-CoV-2","CCAAGGCGAATCACAT",3,40.73,10.61,-0.22,0.05,2.94,1.07,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","CCAAGGCTTAACATAA",3,30.74,8.63,-2.2,0.44,1.5,1,0.07,">1 nonsynonymous","N92A T100L I138Y",3
"lib2","SARS-CoV-2","CCAAGGCTTTTCATAC",4,0.52,NA,NA,NA,NA,NA,NA,"stop","N4Y F47T L95Y N110*",4
"lib2","SARS-CoV-2","CCAAGGGAAATTAAGT",8,10.01,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","T15W S19P D97V G101H E135S",5
"lib2","SARS-CoV-2","CCAAGGTAAATATGGA",1,19.16,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F99D V181F H189L",3
"lib2","SARS-CoV-2","CCAAGGTGTCTGAGTA",14,104.55,10.78,-0.05,0.06,2.9,1.1,0,"1 nonsynonymous","S147D",1
"lib2","SARS-CoV-2","CCAAGGTTACAAATCC",3,0,NA,NA,NA,NA,NA,NA,"stop","S41T K56C D97V V103S Y123G R179*",6
"lib2","SARS-CoV-2","CCAAGGTTATACGATA",7,52.42,9.45,-1.38,0.16,1.59,1.08,0.01,">1 nonsynonymous","V52A N58M A81V N171Y",4
"lib2","SARS-CoV-2","CCAAGGTTCATTGGTG",1,6.6,7.53,-3.31,0.78,3,1,0.01,">1 nonsynonymous","S36D N58V Y93S S129Y",4
"lib2","SARS-CoV-2","CCAAGTAAAAGCACTA",8,20.44,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","G83L K94R F99Y I104S",4
"lib2","SARS-CoV-2","CCAAGTAAAGCAAGAC",1,111.35,8.23,-2.61,0.11,2.54,1.06,0,">1 nonsynonymous","A67V T85C T140S G166L H189N T201S",6
"lib2","SARS-CoV-2","CCAAGTAAGATAATAA",5,12.1,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A89I Y119T N151V Q163L",4
"lib2","SARS-CoV-2","CCAAGTACAACAAGCC",6,72,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F47N C61D R78N G86C F167P",5
"lib2","SARS-CoV-2","CCAAGTATAACAACGC",6,86.24,10.52,-0.31,0.05,2.95,1.05,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","CCAAGTCAATGGCTTA",3,52.53,7.28,-3.56,0.16,1.5,1.1,0,">1 nonsynonymous","C31V Y121P",2
"lib2","SARS-CoV-2","CCAAGTCAGCTGGCAA",7,109.45,8.72,-2.12,0.05,2.87,1.04,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","CCAAGTCAGTAAACAT",7,64.61,9.25,-1.59,0.05,2.92,1.15,0,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","CCAAGTCGACGAGCCA",1,24.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23F C61N C150L G172I T201I",5
"lib2","SARS-CoV-2","CCAAGTCTATGAATGA",3,65.18,6,-4.84,2,2.91,1.18,0,">1 nonsynonymous","N157S Y175T",2
"lib2","SARS-CoV-2","CCAAGTCTGCTCAAAA",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G R73A Q79M A192P T201I",5
"lib2","SARS-CoV-2","CCAAGTGATGGAAGCC",5,131.89,9.35,-1.49,0.04,2.92,1.08,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","CCAAGTGTAAAAGAAT",4,43.1,8.62,-2.22,0.21,1.78,1.04,0.02,">1 nonsynonymous","F12T S41L G74A",3
"lib2","SARS-CoV-2","CCAAGTGTACCATAAC",1,18.46,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Q84K G172N Y178I",3
"lib2","SARS-CoV-2","CCAAGTTAACTCGCCG",7,4.86,NA,NA,NA,NA,NA,NA,"stop","T46* N64R F99L C158D",4
"lib2","SARS-CoV-2","CCAAGTTACTTATGAA",4,47.02,9.42,-1.42,0.12,2.64,1.09,0.01,">1 nonsynonymous","G9S D34E Q168G",3
"lib2","SARS-CoV-2","CCAAGTTATTATTCTA",8,147.32,9.73,-1.11,0.05,2.77,1.05,0,">1 nonsynonymous","C6E Y123S N130I",3
"lib2","SARS-CoV-2","CCAAGTTCCACTGTCG",7,51.12,8.59,-2.25,0.24,1.5,1,0.03,">1 nonsynonymous","D68T D97Y T100I",3
"lib2","SARS-CoV-2","CCAATAAAAAAAATAA",7,37.3,9.24,-1.6,0.1,1.84,1.08,0.01,"1 nonsynonymous","V77S",1
"lib2","SARS-CoV-2","CCAATAAACGCTAACT",9,64.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29L N64F F99P P149Q",4
"lib2","SARS-CoV-2","CCAATAAAGATATGCT",6,19.84,6.69,-4.14,0.19,1.5,1.08,0.01,">1 nonsynonymous","N30W S41L R127Q",3
"lib2","SARS-CoV-2","CCAATAAATCAATACA",5,10.81,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S41H K94E N151P",3
"lib2","SARS-CoV-2","CCAATAAATTAGATAC",20,107.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14S N24P D34R Y143S",4
"lib2","SARS-CoV-2","CCAATAACAAAAAGCA",9,103.44,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A14H Y50M V65I K87Q",4
"lib2","SARS-CoV-2","CCAATAACCCAACATA",7,146.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5N G86N N120F L131Q",4
"lib2","SARS-CoV-2","CCAATAACGAACAACA",2,53.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K87T N107V G117R E135K",4
"lib2","SARS-CoV-2","CCAATAAGAAAATAAA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","G9L A14* P149V",3
"lib2","SARS-CoV-2","CCAATAAGGGAGAGGG",5,69.43,10.57,-0.27,0.04,2.9,1.08,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","CCAATAAGGTAGTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28L A42F Q144*",3
"lib2","SARS-CoV-2","CCAATAAGGTGCTCCC",4,27.45,8.55,-2.28,0.07,2.85,1.09,0,">1 nonsynonymous","S36H T63A Y119F P169S V173Q",5
"lib2","SARS-CoV-2","CCAATAATACCTTCCC",1,33.38,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F44E K56L C150M",3
"lib2","SARS-CoV-2","CCAATAATCACAAGAA",8,58.23,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","N1L T46N A67S L95P T140I G155P",6
"lib2","SARS-CoV-2","CCAATAATCAGCTGAT",4,48.37,9.95,-0.89,0.08,2.12,1.05,0,"1 nonsynonymous","K94F",1
"lib2","SARS-CoV-2","CCAATAATTAACTCAT",5,22.89,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","CCAATAATTTAGCATA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27C K48M T85D N120C T140Q",5
"lib2","SARS-CoV-2","CCAATACAAACCATTA",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V F47E Y119S C150V",4
"lib2","SARS-CoV-2","CCAATACAATCCAGTT",13,93.01,8.76,-2.08,0.13,1.8,1.14,0.01,">1 nonsynonymous","C6W K114L K128I",3
"lib2","SARS-CoV-2","CCAATACAATCTCTAC",3,25.17,10.09,-0.75,0.06,2.9,1.04,0,">1 nonsynonymous","S139D G155N",2
"lib2","SARS-CoV-2","CCAATACAGGACAAAG",11,83.51,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N4G P96L N107K Y123M Q168H",5
"lib2","SARS-CoV-2","CCAATACAGTCCCGAT",3,53.56,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K48R P96N F99A K128E",4
"lib2","SARS-CoV-2","CCAATACATTATACAC",3,5.72,10.15,-0.68,0.28,2.58,1.19,0.04,">1 nonsynonymous","N24Y S200T",2
"lib2","SARS-CoV-2","CCAATACATTTGGAAC",8,191.15,10.24,-0.6,0.03,2.84,1.07,0,">1 nonsynonymous","S36P N151M S200Q",3
"lib2","SARS-CoV-2","CCAATACGCGAAGGTG",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S I72S F99P G152M Y178E C195A",6
"lib2","SARS-CoV-2","CCAATAGAAAAGGACT",2,12.44,10.92,0.09,0.06,2.95,1.04,0,">1 nonsynonymous","A42P K56S",2
"lib2","SARS-CoV-2","CCAATAGAAGTTGCTG",13,203.25,9.69,-1.15,0.03,2.94,1.08,0,"1 nonsynonymous","N118R",1
"lib2","SARS-CoV-2","CCAATAGGACTTAGAC",13,298.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S29W G86M D97M Y123S Q176P",5
"lib2","SARS-CoV-2","CCAATAGGGTATATTA",2,10.2,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F62L V77K A105Q S113A",4
"lib2","SARS-CoV-2","CCAATAGTGTGGATAT",1,16.51,10.7,-0.14,0.12,2.94,1,0.01,">1 nonsynonymous","D59N G152R",2
"lib2","SARS-CoV-2","CCAATATACACCGAAA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","F8R V20T Y165R Q168*",4
"lib2","SARS-CoV-2","CCAATATACACGCTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103T V115S E135K P149F C158D",5
"lib2","SARS-CoV-2","CCAATATACATTAACA",12,66.67,8.67,-2.17,0.52,1.5,1,0.07,">1 nonsynonymous","S53P P96W",2
"lib2","SARS-CoV-2","CCAATATACGCTAGAT",6,31.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y50N Y91R",2
"lib2","SARS-CoV-2","CCAATATACTCTATTA",12,7.69,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib2","SARS-CoV-2","CCAATATACTGGTAGT",3,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76F N107G",2
"lib2","SARS-CoV-2","CCAATATCATATACCA",3,34.62,10.73,-0.1,0.05,2.92,1.11,0,">1 nonsynonymous","P149L T201L",2
"lib2","SARS-CoV-2","CCAATATTAACCCTAT",7,125.88,11.03,0.19,0.07,2.93,1.08,0,">1 nonsynonymous","L122K S129A K198V",3
"lib2","SARS-CoV-2","CCAATATTAGCGAACA",9,99.32,6.25,-4.59,0.54,1.5,1.17,0.01,">1 nonsynonymous","L5P F99I F167Y",3
"lib2","SARS-CoV-2","CCAATATTATCTATAA",1,6.21,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","F99I N109D V180N",3
"lib2","SARS-CoV-2","CCAATATTTCAGCTAG",24,435.56,8.66,-2.18,0.06,2.93,1.08,0,">1 nonsynonymous","R27A T170V",2
"lib2","SARS-CoV-2","CCAATCAAAAAAGAAT",2,15.22,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","T3A E10I Y91V K128I G166C",5
"lib2","SARS-CoV-2","CCAATCAAACCAATAT",10,109.65,9.81,-1.03,0.39,1.5,1,0.06,">1 nonsynonymous","F44I D97E W106N Y123V",4
"lib2","SARS-CoV-2","CCAATCAAGGGGAAGG",6,87.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I28T K94G R136T",3
"lib2","SARS-CoV-2","CCAATCACAATGCGAA",1,12.98,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A33P A42T C102E",3
"lib2","SARS-CoV-2","CCAATCACAGAACTAC",1,31.15,9.39,-1.44,0.13,1.93,1.12,0.01,">1 nonsynonymous","E10D D34Y K48M N120S",4
"lib2","SARS-CoV-2","CCAATCACCAAGTCGC",7,137.99,10.14,-0.7,0.05,2.81,1.1,0,">1 nonsynonymous","G83D K114L",2
"lib2","SARS-CoV-2","CCAATCACCAATTAAT",3,1.49,NA,NA,NA,NA,NA,NA,"stop","Q84* G155S",2
"lib2","SARS-CoV-2","CCAATCACTAGACTCA",5,20.07,7.02,-3.82,0.37,1.5,1.15,0.03,">1 nonsynonymous","I104R P169N",2
"lib2","SARS-CoV-2","CCAATCAGCATAAGAA",6,34.94,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N58K W106L S139T P161Q",4
"lib2","SARS-CoV-2","CCAATCAGCCTTCATG",3,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I D98V T100N N118R T170K",5
"lib2","SARS-CoV-2","CCAATCATAAATTCAA",8,58.41,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R27P S36F W106T D112N S200L",5
"lib2","SARS-CoV-2","CCAATCATACGAATTA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","A89* D98V K132D",3
"lib2","SARS-CoV-2","CCAATCATCACTCTGT",8,44.2,10.78,-0.05,0.07,2.88,1.04,0,">1 nonsynonymous","Y121C Q163V",2
"lib2","SARS-CoV-2","CCAATCATGATTACAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","Y91* Y119S",2
"lib2","SARS-CoV-2","CCAATCCAATGAGATC",1,38.5,8.81,-2.03,0.06,2.4,1.03,0,">1 nonsynonymous","G74M E141K",2
"lib2","SARS-CoV-2","CCAATCCAGCCAGGCC",5,197.05,10.53,-0.31,0.03,2.92,1.05,0,"1 nonsynonymous","G116I",1
"lib2","SARS-CoV-2","CCAATCCAGGCGAATT",3,34.07,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G86D L131A",2
"lib2","SARS-CoV-2","CCAATCCATAACTTAC",8,201.31,10.62,-0.22,0.04,2.89,1.1,0,">1 nonsynonymous","T85S G155S",2
"lib2","SARS-CoV-2","CCAATCCCTACGTTTT",13,130.95,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","CCAATCCGCTAACCAT",4,1.38,NA,NA,NA,NA,NA,NA,"stop","Y35R P133* S139R",3
"lib2","SARS-CoV-2","CCAATCCGTTTTATGA",4,29.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A42V F70D Y119L",3
"lib2","SARS-CoV-2","CCAATCGAATAACCAA",5,19.62,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15G N64A A81S I88V D97F P133V",6
"lib2","SARS-CoV-2","CCAATCGAATACGCTA",5,50.57,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y119H E141C F167P",3
"lib2","SARS-CoV-2","CCAATCGACCAGACAA",5,16.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15V K48V F99I P133V",4
"lib2","SARS-CoV-2","CCAATCGACGGTACTA",4,35.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P54I F167R",2
"lib2","SARS-CoV-2","CCAATCGCAGACATTA",12,0.73,NA,NA,NA,NA,NA,NA,"stop","A18G P54L F70L P82A I104* S139P",6
"lib2","SARS-CoV-2","CCAATCGCAGTACAAA",2,38.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58V A81T W106K",3
"lib2","SARS-CoV-2","CCAATCGCCAGGGAGG",1,13.77,6,-4.84,2,1.5,1.14,0.08,">1 nonsynonymous","W23C W106L N157I",3
"lib2","SARS-CoV-2","CCAATCGCTCCCAACC",4,24.5,8.43,-2.41,0.3,1.5,1.15,0.06,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","CCAATCGGACATTACC",5,58.8,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N40Y N107L N120S P177V",4
"lib2","SARS-CoV-2","CCAATCGTTGGTCCAA",4,84.78,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5D L125A G146W Y165C Q176E A190G",6
"lib2","SARS-CoV-2","CCAATCTAAATTATTC",1,16.73,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F17I S43F L57E D90A T140M",5
"lib2","SARS-CoV-2","CCAATCTATCAATAAT",11,124.11,6,-4.84,2,1.56,1.15,0.01,">1 nonsynonymous","G86C Y123V F160Y T170M",4
"lib2","SARS-CoV-2","CCAATCTCACATATTG",12,161.87,10.48,-0.35,0.04,2.9,1.07,0,">1 nonsynonymous","L5M E141A E154N",3
"lib2","SARS-CoV-2","CCAATCTCAGGATATA",1,16.11,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","N4Q S36E I88P",3
"lib2","SARS-CoV-2","CCAATCTCGAGTAATT",8,73.96,10.68,-0.15,0.09,2.82,1.12,0,"1 nonsynonymous","C195F",1
"lib2","SARS-CoV-2","CCAATCTCGCCACCCG",13,188.62,10.74,-0.09,0.05,2.89,1.1,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","CCAATCTGAACATACT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49T T55G S69* A105S",4
"lib2","SARS-CoV-2","CCAATCTGAACTATTT",15,501.16,9.15,-1.69,0.05,2.79,1.1,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","CCAATCTGCATTAGTC",4,31.23,9.71,-1.13,0.06,2.87,1.16,0,"1 nonsynonymous","P169G",1
"lib2","SARS-CoV-2","CCAATGAACAACGTTG",4,79.85,10.85,0.01,0.05,2.96,1.06,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CCAATGAACGGACAGT",2,46.52,9.94,-0.9,0.04,2.88,1.03,0,">1 nonsynonymous","C6P C31L",2
"lib2","SARS-CoV-2","CCAATGAACTAATTCA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","CCAATGAATTAAACCT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T F44N F47S T201L",4
"lib2","SARS-CoV-2","CCAATGACAACCAATT",4,71.31,9.02,-1.82,0.22,1.67,1.13,0.02,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","CCAATGACCGATAAAA",3,23.46,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V37E P54R N92R P149Q V153D",5
"lib2","SARS-CoV-2","CCAATGATAAAATTCC",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T3A P96W G117*",3
"lib2","SARS-CoV-2","CCAATGATGACCAGAG",15,1.21,NA,NA,NA,NA,NA,NA,"stop","T63V P133*",2
"lib2","SARS-CoV-2","CCAATGATGTCTCCGC",4,22.58,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A81F P149L C158T",3
"lib2","SARS-CoV-2","CCAATGCAATGAATAA",1,9.93,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C102V Y165C",2
"lib2","SARS-CoV-2","CCAATGCAATTCGCTG",9,92.21,8.06,-2.77,0.38,1.5,1,0.06,">1 nonsynonymous","P82G Y178N",2
"lib2","SARS-CoV-2","CCAATGCAGATCTATG",4,1.16,NA,NA,NA,NA,NA,NA,"stop","W23L C31L K48I W106R F134W Y175K V181* H189L",8
"lib2","SARS-CoV-2","CCAATGCCAGCCCAAT",3,22.43,9.71,-1.13,0.18,2.06,1.06,0.02,">1 nonsynonymous","Y178R C195I",2
"lib2","SARS-CoV-2","CCAATGCCATCAAACT",5,2.97,NA,NA,NA,NA,NA,NA,"stop","G86Y S113E K128* C150M T170A",5
"lib2","SARS-CoV-2","CCAATGCCCAGACATA",5,0,NA,NA,NA,NA,NA,NA,"stop","T46N C61* D98E",3
"lib2","SARS-CoV-2","CCAATGCCGCTCATTG",1,13.15,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","T3E E10G R73P T100D N157Y V173S S200V",7
"lib2","SARS-CoV-2","CCAATGGCATACAAAC",7,133.92,10.45,-0.39,0.06,2.92,1.06,0,"1 nonsynonymous","A14C",1
"lib2","SARS-CoV-2","CCAATGGGGCTAGGAG",4,66.52,10.84,0,0.06,2.98,1.05,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","CCAATGTACCCACCAC",1,25.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64V A81T Y119C S129F Q144H",5
"lib2","SARS-CoV-2","CCAATGTCCAAGTAGC",16,236.83,9.83,-1.01,0.07,1.99,1.05,0,">1 nonsynonymous","V32S Y123I S164Q",3
"lib2","SARS-CoV-2","CCAATGTGTCGCAAAA",4,34.35,9.41,-1.43,0.11,2.01,1.1,0.01,">1 nonsynonymous","F12S A42S K56H",3
"lib2","SARS-CoV-2","CCAATGTTCCACAAAG",6,66.98,10.82,-0.02,0.07,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTAAAGGCTAAA",2,29.54,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28T Y123Q C150R",3
"lib2","SARS-CoV-2","CCAATTAACTTGAGTA",4,67.19,10.82,-0.02,0.03,2.89,1.12,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","CCAATTAAGAAGACAC",7,73.48,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T15M T148P G155K F167T",4
"lib2","SARS-CoV-2","CCAATTACAAGAATCT",2,9.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6P F44T V103Y",3
"lib2","SARS-CoV-2","CCAATTACAATACAAA",6,37.06,10.79,-0.05,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTACAGCGCCTA",6,79.21,10.9,0.06,0.04,2.94,1.07,0,">1 nonsynonymous","L5A V37A Q168S",3
"lib2","SARS-CoV-2","CCAATTACCGAAACAT",10,178.42,10.71,-0.13,0.02,2.96,1.06,0,"1 nonsynonymous","Y66L",1
"lib2","SARS-CoV-2","CCAATTACGACAAAAG",3,16.06,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N13L S41T I80R Y119R",4
"lib2","SARS-CoV-2","CCAATTACTCGTCTAT",1,2.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","CCAATTAGAGCTATGG",2,8.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6R W23T L57M G83I D90F D98V N151C",7
"lib2","SARS-CoV-2","CCAATTAGCCAATTTG",3,26.02,10.01,-0.83,0.08,2.76,1.1,0,">1 nonsynonymous","P54D T63S A81S K199N",4
"lib2","SARS-CoV-2","CCAATTAGGTCAACCG",4,61.92,9.89,-0.95,0.09,2.25,1.09,0,">1 nonsynonymous","F8L F44T K56S S129M V194I",5
"lib2","SARS-CoV-2","CCAATTATAACTGCAA",5,67.56,10.83,-0.01,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTATTATTAACC",7,102.39,9.51,-1.32,0.06,2.27,1.06,0,">1 nonsynonymous","S36M L131V Q144R S164E",4
"lib2","SARS-CoV-2","CCAATTATTCCCATGC",4,1.29,NA,NA,NA,NA,NA,NA,"stop","G51L Q84* D90T W106F V115G S129F",6
"lib2","SARS-CoV-2","CCAATTATTCTAAACA",5,120.86,10.38,-0.46,0.04,2.86,1.05,0,">1 nonsynonymous","A81T T201V",2
"lib2","SARS-CoV-2","CCAATTCAGTAAAAAG",2,147.4,8.84,-1.99,0.05,2.93,1.04,0,">1 nonsynonymous","A42T F134S G166T",3
"lib2","SARS-CoV-2","CCAATTCATCCAACCG",2,14.72,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","Y66R S113I",2
"lib2","SARS-CoV-2","CCAATTCCTAATCTCG",18,297.39,9.75,-1.09,0.03,2.93,1.06,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","CCAATTCCTGGAGGTC",6,61.07,10.59,-0.24,0.05,2.94,1.01,0,">1 nonsynonymous","S45N D97I",2
"lib2","SARS-CoV-2","CCAATTCGTTATTCGG",12,230.92,10.85,0.01,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTCTAAACAGCA",1,50.49,10.8,-0.04,0.03,2.98,1.04,0,"1 nonsynonymous","S45Q",1
"lib2","SARS-CoV-2","CCAATTGAAATAAATA",7,49.66,10.35,-0.49,0.03,2.91,1.03,0,">1 nonsynonymous","S53W D97V",2
"lib2","SARS-CoV-2","CCAATTGACTGATATT",5,63.97,6,-4.84,1.64,1.5,1.26,0.03,">1 nonsynonymous","G83I S113D F126G G174H",4
"lib2","SARS-CoV-2","CCAATTGATAATAATT",2,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S F99V N107D P149A",4
"lib2","SARS-CoV-2","CCAATTGATAGCAGGA",1,22.95,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y66K I104N Y121V Y165I",4
"lib2","SARS-CoV-2","CCAATTGCAGCCCATA",5,58.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12A V77R K94V V103L",4
"lib2","SARS-CoV-2","CCAATTGGACCTAGTT",6,53.03,10.83,0,0.07,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTGGAGACGACT",3,48.32,10.58,-0.26,0.07,2.95,1,0,"1 nonsynonymous","N13Q",1
"lib2","SARS-CoV-2","CCAATTGTTCACAGGG",3,13.53,10.69,-0.15,0.1,2.85,1.07,0,">1 nonsynonymous","N4T T15V S200A",3
"lib2","SARS-CoV-2","CCAATTGTTTGACTTA",8,167.35,10.7,-0.14,0.04,2.93,1.08,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CCAATTTAAAACCATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","CCAATTTAACACGACT",5,81.2,10.6,-0.23,0.04,2.94,1.04,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","CCAATTTACAAACTCA",7,126.1,10.87,0.03,0.03,2.94,1.07,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","CCAATTTACAAATGGA",1,1.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99A",1
"lib2","SARS-CoV-2","CCAATTTACTATATCT",7,86.94,10.89,0.06,0.07,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAATTTTAACCAGTA",5,34.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5S L57S P96S A105V N151S",5
"lib2","SARS-CoV-2","CCAATTTTACGATACT",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G S41F P82K",3
"lib2","SARS-CoV-2","CCAATTTTCGACCCCG",6,24.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q S19K K94G S113R I142L",5
"lib2","SARS-CoV-2","CCACAAAAAAAGACGA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","A14N D68*",2
"lib2","SARS-CoV-2","CCACAAAAAACATGCT",6,0.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","CCACAAAAACAGCGGT",4,33.22,7.93,-2.91,0.29,1.5,1.11,0.03,">1 nonsynonymous","S19Y N58G",2
"lib2","SARS-CoV-2","CCACAAAAAGTACGAT",12,129.23,10.85,0.02,0.05,2.91,1.1,0,"1 nonsynonymous","K56Q",1
"lib2","SARS-CoV-2","CCACAAAAATGCGAAA",1,19.98,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","Y91H C158F",2
"lib2","SARS-CoV-2","CCACAAAACATCTGGG",3,12.91,6,-4.84,1.4,3,1.15,0.01,">1 nonsynonymous","G101L K128V S139H",3
"lib2","SARS-CoV-2","CCACAAAATACCATAG",5,118.36,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K87N P177L",2
"lib2","SARS-CoV-2","CCACAAAATCACTAAT",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A I104R",2
"lib2","SARS-CoV-2","CCACAAAATTCATCTA",1,86.55,10.46,-0.38,0.05,2.97,1.03,0,">1 nonsynonymous","V32N N171S",2
"lib2","SARS-CoV-2","CCACAAAATTTATAAA",5,32.87,8.84,-2,0.12,2.54,1.13,0.01,">1 nonsynonymous","C6A E141K G174L",3
"lib2","SARS-CoV-2","CCACAAAATTTTAGTT",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F N40H L95P Y143S",4
"lib2","SARS-CoV-2","CCACAAACACTCCTCG",7,124.14,7.28,-3.55,0.15,1.63,1.1,0.01,">1 nonsynonymous","Y175I K199M",2
"lib2","SARS-CoV-2","CCACAAACAGCTCTAA",4,99.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24D R136T Y175I Y178F",4
"lib2","SARS-CoV-2","CCACAAACATGATACG",1,7.18,9.51,-1.32,0.07,3,1,0,">1 nonsynonymous","E10G G174F",2
"lib2","SARS-CoV-2","CCACAAACCCCACGGC",6,1964.47,10.31,-0.52,0.04,2.66,1.03,0,">1 nonsynonymous","Y91N E141Q T201H",3
"lib2","SARS-CoV-2","CCACAAACCTTGACAA",3,18.52,10.29,-0.55,0.07,2.89,1.14,0,">1 nonsynonymous","T55S N110I N151V",3
"lib2","SARS-CoV-2","CCACAAAGATGTTCTT",2,13.19,6,-4.84,2,2.46,1.12,0.01,">1 nonsynonymous","F8Y L95W W106D R136G",4
"lib2","SARS-CoV-2","CCACAAAGGAGTCTGA",3,24.81,6.24,-4.59,0.7,1.5,1.16,0.02,">1 nonsynonymous","C6N V77T T100C Y123S",4
"lib2","SARS-CoV-2","CCACAAAGGGGCAGGT",2,7.66,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","W106N E135G E141V",3
"lib2","SARS-CoV-2","CCACAAATAAAATTTT",1,16.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q C49P K114N E135M P149L",5
"lib2","SARS-CoV-2","CCACAAATAGACTAAA",1,13.28,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","N40S C61L K94L Y123E P133T T170S",6
"lib2","SARS-CoV-2","CCACAAATGATTCTCC",2,28.04,6.41,-4.43,0.68,1.5,1.22,0.03,">1 nonsynonymous","L5S L131G P177C",3
"lib2","SARS-CoV-2","CCACAAATTGACAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7T T15L S41V Y121L P133K Q144*",6
"lib2","SARS-CoV-2","CCACAAATTTCCGTAG",7,174.96,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","D34W S45W K56I R124L P177R",5
"lib2","SARS-CoV-2","CCACAAATTTGATCAT",6,1.09,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","CCACAACAAACGTATA",4,1.42,NA,NA,NA,NA,NA,NA,"stop","K56V Q168*",2
"lib2","SARS-CoV-2","CCACAACAATCGGATT",5,76.39,10.76,-0.07,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACAACAATCGTTTG",9,0.02,NA,NA,NA,NA,NA,NA,"stop","N157*",1
"lib2","SARS-CoV-2","CCACAACATTAGTACA",2,0.52,NA,NA,NA,NA,NA,NA,"stop","F12T D34P V77K G101C N107*",5
"lib2","SARS-CoV-2","CCACAACCTAGACTGG",11,58.54,6,-4.84,0.99,1.5,1.1,0.02,">1 nonsynonymous","D34L K56M E141T G172I",4
"lib2","SARS-CoV-2","CCACAACCTAGACTGT",10,133.21,9.91,-0.92,0.08,2.47,1.04,0,">1 nonsynonymous","Y35V A89V F160A",3
"lib2","SARS-CoV-2","CCACAACGACAAAATG",2,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S P82K K87P N157A",4
"lib2","SARS-CoV-2","CCACAACGCAACACAT",8,140.33,7.34,-3.49,0.2,1.52,1.15,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","CCACAACGCACGAAAA",3,28.77,10.75,-0.08,0.07,2.98,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACAACGCCGAAACG",4,88.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68Q Y178M",2
"lib2","SARS-CoV-2","CCACAACTACTAGCGG",6,75.63,10.42,-0.41,0.06,2.78,1.18,0,">1 nonsynonymous","L5R E10R",2
"lib2","SARS-CoV-2","CCACAACTCAACAGTC",6,66.59,9.19,-1.64,0.08,2.62,1.01,0,">1 nonsynonymous","S41V I142K",2
"lib2","SARS-CoV-2","CCACAACTGCAATTTC",1,14.87,10.75,-0.09,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACAAGAAGTTCCTA",3,23.96,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T3R F17E V77K P161Y G172R",5
"lib2","SARS-CoV-2","CCACAAGAATGATTGG",3,5.52,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G86T T100R Y121S C150A",4
"lib2","SARS-CoV-2","CCACAAGACCGTGCAA",5,88.59,10.84,0.01,0.06,2.94,1.08,0,"1 nonsynonymous","Y39F",1
"lib2","SARS-CoV-2","CCACAAGATTGTAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R F126A",2
"lib2","SARS-CoV-2","CCACAAGCAGTCCCGC",1,5.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T G74I K94S T100P I104V F134L D137N T148S",8
"lib2","SARS-CoV-2","CCACAAGCATGCAAGG",6,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65G P149R F167S T201Q",4
"lib2","SARS-CoV-2","CCACAAGGCGTAAAAC",2,56,10.03,-0.81,0.07,2.6,1.07,0,"1 nonsynonymous","Y91Q",1
"lib2","SARS-CoV-2","CCACAAGGTCCGTTAT",8,7.91,NA,NA,NA,NA,NA,NA,"stop","N30* D97V A105R N118V",4
"lib2","SARS-CoV-2","CCACAAGTGGCTCCAG",5,19.85,6.79,-4.05,0.62,1.5,1.11,0.07,">1 nonsynonymous","T15C Y39V V115L C150Y",4
"lib2","SARS-CoV-2","CCACAAGTTCCCACAT",5,59.36,8.37,-2.46,0.17,1.5,1.12,0.01,">1 nonsynonymous","G9V G86N",2
"lib2","SARS-CoV-2","CCACAATAATAAGATC",2,62.59,10.2,-0.64,0.04,2.97,1.04,0,">1 nonsynonymous","K87M F126M F160Y",3
"lib2","SARS-CoV-2","CCACAATAATGAAACA",4,151.66,10.87,0.03,0.04,2.85,1.14,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","CCACAATACGTTAGAA",6,50.78,10.04,-0.79,0.09,2.49,1.03,0,"1 nonsynonymous","V182C",1
"lib2","SARS-CoV-2","CCACAATATCATGCAT",4,0.42,NA,NA,NA,NA,NA,NA,"stop","G9Q S19* A81I C150P P161T P169C",6
"lib2","SARS-CoV-2","CCACAATCAAATCAAC",15,252.96,8.72,-2.12,0.06,2.9,1.08,0,">1 nonsynonymous","E10S Y119C",2
"lib2","SARS-CoV-2","CCACAATCACATAATG",1,25.1,10.52,-0.32,0.05,2.98,1,0,">1 nonsynonymous","R27S Q144K",2
"lib2","SARS-CoV-2","CCACAATCATCCCGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9M T63* Y123V",3
"lib2","SARS-CoV-2","CCACAATCTAACATAT",2,30.88,8.05,-2.79,0.1,2.35,1.02,0,">1 nonsynonymous","D34A Y119N G152S S184H",4
"lib2","SARS-CoV-2","CCACAATGAATAACAA",5,0.79,NA,NA,NA,NA,NA,NA,"stop","D98* W106A Y119F L131S C158P V182M",6
"lib2","SARS-CoV-2","CCACAATGGTCCACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D K87S K128L T148K",4
"lib2","SARS-CoV-2","CCACAATTATCATAAA",5,30.35,10.76,-0.08,0.06,2.9,1.12,0,">1 nonsynonymous","C61T C195F",2
"lib2","SARS-CoV-2","CCACAATTGTACCATA",3,23.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83V P161Q",2
"lib2","SARS-CoV-2","CCACAATTTTTTGGGA",2,99.56,9.78,-1.06,0.08,2.08,1.01,0,">1 nonsynonymous","D34W T46M Y66L",3
"lib2","SARS-CoV-2","CCACACAAATTGTGCT",8,53.28,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C49Q A89P T170R",3
"lib2","SARS-CoV-2","CCACACAACTCGTCCC",5,70.37,8.77,-2.06,0.1,2.67,1.13,0,">1 nonsynonymous","K94H G174V",2
"lib2","SARS-CoV-2","CCACACAAGTCCAGAT",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D S43P S53L A67H",4
"lib2","SARS-CoV-2","CCACACAATCCGATCC",2,18.93,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","L60M T85V N92I",3
"lib2","SARS-CoV-2","CCACACACAACTGAAG",2,19.24,9.57,-1.27,0.14,1.92,1.12,0.01,">1 nonsynonymous","V11S L60S",2
"lib2","SARS-CoV-2","CCACACACCCCATCAA",5,60,9.02,-1.82,0.17,1.5,1.15,0.01,">1 nonsynonymous","G86A E141K",2
"lib2","SARS-CoV-2","CCACACACGCAGCAAA",1,5.97,7.47,-3.37,0.14,3,1.04,0,"1 nonsynonymous","D112A",1
"lib2","SARS-CoV-2","CCACACATACACGACC",5,1.42,NA,NA,NA,NA,NA,NA,"stop","D68* G117S N157Y Q163C Y165C",5
"lib2","SARS-CoV-2","CCACACATCGCCACAC",14,93.35,9.57,-1.27,0.06,1.88,1.08,0,">1 nonsynonymous","S45V T63A G83S V153N",4
"lib2","SARS-CoV-2","CCACACCAAAAAGTAA",9,73.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y50V N92M Y143V",3
"lib2","SARS-CoV-2","CCACACCAAATGCTTA",11,220.97,10.63,-0.21,0.03,2.96,1.04,0,">1 nonsynonymous","E10T Q84S",2
"lib2","SARS-CoV-2","CCACACCAACTGCGCA",8,185.17,10.8,-0.03,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACACCCTCAAGTGC",3,37.45,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N107W Y121R Y175S",3
"lib2","SARS-CoV-2","CCACACCCTTCCATTA",2,5.2,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","F44T R73S N92V N107C S129M",5
"lib2","SARS-CoV-2","CCACACCGAGAAGAAC",3,69.07,9.63,-1.21,0.04,2.86,1.01,0,">1 nonsynonymous","K114C V173P",2
"lib2","SARS-CoV-2","CCACACCGATCAAGAT",4,39.83,10.84,0.01,0.03,2.97,1.05,0,"1 nonsynonymous","T63A",1
"lib2","SARS-CoV-2","CCACACCTAAAAACCT",7,51.12,7.84,-2.99,0.27,1.5,1.15,0.02,"1 nonsynonymous","Y93M",1
"lib2","SARS-CoV-2","CCACACCTATTTACAA",11,169.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P96T Q176S",2
"lib2","SARS-CoV-2","CCACACCTGGGAGTTT",10,131.52,9.87,-0.97,0.05,2.89,1.05,0,"1 nonsynonymous","G74A",1
"lib2","SARS-CoV-2","CCACACGAAGAGATTT",4,35.79,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T46A V77K N107H P169S",4
"lib2","SARS-CoV-2","CCACACGCACTAAATA",1,18.66,9.78,-1.05,0.11,2.04,1.03,0.01,">1 nonsynonymous","G9Y P96T P149Q",3
"lib2","SARS-CoV-2","CCACACGCCATAACCT",5,37.05,9.39,-1.45,0.06,3,1.03,0,">1 nonsynonymous","L5N Y119T P197G",3
"lib2","SARS-CoV-2","CCACACTAACTTCACC",3,178.92,10.29,-0.55,0.03,2.88,1.02,0,">1 nonsynonymous","A105T K114H S147R",3
"lib2","SARS-CoV-2","CCACACTAATACACAA",1,2.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","CCACACTACGGTCAAA",7,3.38,NA,NA,NA,NA,NA,NA,"stop","N1R F99P S139T V181*",4
"lib2","SARS-CoV-2","CCACACTAGACTTATA",2,46.3,10.71,-0.12,0.02,2.97,1.03,0,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","CCACACTATAGACATC",5,89.16,10.89,0.05,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACACTCCTCACCTG",6,100.75,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","R16K A33N S53P S139P T148H",5
"lib2","SARS-CoV-2","CCACACTCTAGACTGC",22,301.57,10.01,-0.83,0.03,2.85,1.02,0,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","CCACACTGAGTCACCA",6,177.98,10.64,-0.2,0.04,2.91,1.07,0,">1 nonsynonymous","T140L N171I",2
"lib2","SARS-CoV-2","CCACACTGTATTTCTC",1,55,10.83,-0.01,0.06,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACACTGTTTGGTGA",2,38.77,10.86,0.02,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACAGAAAAATTCTT",2,11.86,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A89R D97C Q168V",3
"lib2","SARS-CoV-2","CCACAGACACAATACC",2,7.76,9.86,-0.97,0.22,1.99,1.23,0.02,">1 nonsynonymous","T63S V182A",2
"lib2","SARS-CoV-2","CCACAGACACGCTCTT",1,30.74,10.16,-0.68,0.11,2.7,1.08,0,">1 nonsynonymous","I2M A105C",2
"lib2","SARS-CoV-2","CCACAGAGGTTGCACA",7,76.65,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V20K I88Y K132C F156S",4
"lib2","SARS-CoV-2","CCACAGATAACCTCAT",7,66.36,10.05,-0.79,0.08,2.38,1.03,0,">1 nonsynonymous","T46D F62G",2
"lib2","SARS-CoV-2","CCACAGATAGAGTTAA",8,96.49,10.79,-0.04,0.08,2.85,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACAGCAAACTAGAA",2,1.57,NA,NA,NA,NA,NA,NA,"stop","G86* K132L",2
"lib2","SARS-CoV-2","CCACAGCCAAGCTAAA",2,36.08,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G83N R124H",2
"lib2","SARS-CoV-2","CCACAGCTAACCAATG",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P I72W L95Y",3
"lib2","SARS-CoV-2","CCACAGGAAAGACCTA",2,51.35,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T55V N92S F167H",3
"lib2","SARS-CoV-2","CCACAGGAAGGAACAA",5,18.93,10.3,-0.54,0.07,2.96,1,0,">1 nonsynonymous","L5I K48S G83C K128R",4
"lib2","SARS-CoV-2","CCACAGGATGACGTAC",12,221.54,10.49,-0.34,0.03,2.98,1.02,0,"1 nonsynonymous","K87I",1
"lib2","SARS-CoV-2","CCACAGGCACTCATCA",6,44.63,7.01,-3.82,0.29,1.5,1.08,0.02,">1 nonsynonymous","S36G L122Y Y143R G174K",4
"lib2","SARS-CoV-2","CCACAGGGAACCACTA",6,19.13,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6D F44L G83V",3
"lib2","SARS-CoV-2","CCACAGGTGATAATGG",1,47.88,10.05,-0.79,0.06,2.46,1.01,0,">1 nonsynonymous","G51V K128S",2
"lib2","SARS-CoV-2","CCACAGGTTCTAACAA",3,44.57,10.72,-0.12,0.05,2.97,1,0,"1 nonsynonymous","D59M",1
"lib2","SARS-CoV-2","CCACAGTAAATGCGAC",11,86.45,10.6,-0.23,0.02,2.97,1.03,0,">1 nonsynonymous","A42P C61N N120R",3
"lib2","SARS-CoV-2","CCACAGTAACTATAGG",1,5.69,11.08,0.24,0.1,3,1,0,">1 nonsynonymous","V37T A192F",2
"lib2","SARS-CoV-2","CCACAGTAAGCAGAAC",6,15.82,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T85A F99Q F185Y T201K",4
"lib2","SARS-CoV-2","CCACAGTGTATACTAA",4,105.68,10.41,-0.42,0.05,2.78,1,0,"1 nonsynonymous","Y123I",1
"lib2","SARS-CoV-2","CCACATAAAATGCCTG",5,27.82,9.72,-1.12,0.19,1.96,1.06,0.01,">1 nonsynonymous","N13A S45L",2
"lib2","SARS-CoV-2","CCACATAAATGATAGA",6,136.22,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N130L G152D G172V",3
"lib2","SARS-CoV-2","CCACATACAGGTGAAT",1,13.71,10.58,-0.26,0.06,2.94,1.1,0,">1 nonsynonymous","L5I P149Q G196V",3
"lib2","SARS-CoV-2","CCACATACTGGGTAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* R78Y I88T",3
"lib2","SARS-CoV-2","CCACATAGAAGCCTTA",8,86.5,8.36,-2.48,0.14,1.61,1.16,0.01,">1 nonsynonymous","E10R C31A N58T S139K",4
"lib2","SARS-CoV-2","CCACATAGTTATTCCT",14,111.05,10.72,-0.11,0.03,2.91,1.04,0,"1 nonsynonymous","L131M",1
"lib2","SARS-CoV-2","CCACATATAGCAAACG",14,17.06,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N13G A42R P82Q D97G E135V",5
"lib2","SARS-CoV-2","CCACATATCCGAATAG",2,18.57,9.58,-1.25,0.18,1.8,1.17,0.02,"1 nonsynonymous","F17K",1
"lib2","SARS-CoV-2","CCACATCATAATACGC",7,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10W T15N P96T P197G",5
"lib2","SARS-CoV-2","CCACATCTCGCTCCCT",7,25.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R16A S41F C61A D98I D137V",5
"lib2","SARS-CoV-2","CCACATCTTTTTATCG",1,46.86,10.83,-0.01,0.08,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACATGAAACTAACC",2,85.67,10.49,-0.34,0.06,2.87,1.14,0,">1 nonsynonymous","T55S K87V",2
"lib2","SARS-CoV-2","CCACATGCACCCACGC",2,39.22,10.86,0.02,0.05,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CCACATGCATATACGG",8,2.69,NA,NA,NA,NA,NA,NA,"stop","R16F S36R G86W Y91* T170M",5
"lib2","SARS-CoV-2","CCACATGCTGATCATT",3,29.47,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","V182W",1
"lib2","SARS-CoV-2","CCACATGGCCCTTCGA",2,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L P169G",2
"lib2","SARS-CoV-2","CCACATGTACACCAAC",3,0.77,NA,NA,NA,NA,NA,NA,"stop","V11T R136*",2
"lib2","SARS-CoV-2","CCACATGTATTATGGC",19,267.82,10.79,-0.05,0.05,2.9,1.12,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","CCACATGTCGGCCCCG",3,7.77,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F8L E141H R179Y A190D",4
"lib2","SARS-CoV-2","CCACATGTGGATACTT",11,2.52,NA,NA,NA,NA,NA,NA,"stop","N92D N110T I138A F156*",4
"lib2","SARS-CoV-2","CCACATGTGGGCCAAC",5,42.84,10.04,-0.79,0.07,2.5,1.1,0,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","CCACATGTGGGGCCAT",10,196.2,10.67,-0.17,0.03,2.89,1.07,0,"1 nonsynonymous","D98P",1
"lib2","SARS-CoV-2","CCACATGTTCTAGTGG",1,21.12,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","R16C K199T",2
"lib2","SARS-CoV-2","CCACATTAAAGAAATA",2,10.87,7.52,-3.32,0.22,1.5,1,0.01,">1 nonsynonymous","W23D D97E P149A",3
"lib2","SARS-CoV-2","CCACATTCCTGACATG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14N Y165* E186L",3
"lib2","SARS-CoV-2","CCACATTGAAAAAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","R25* P82L",2
"lib2","SARS-CoV-2","CCACATTGATGTACGT",4,26.99,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V11F V37M V103F F185S",4
"lib2","SARS-CoV-2","CCACATTTAAACAAAG",2,18.15,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G9R P177L",2
"lib2","SARS-CoV-2","CCACATTTAGTCCGAG",1,6.42,10.85,0.01,0.11,3,1.02,0,"1 nonsynonymous","N130I",1
"lib2","SARS-CoV-2","CCACCAAACGAATTCT",8,0.82,NA,NA,NA,NA,NA,NA,"stop","I2S F44* R78T K94T G117H Y123L P169L",7
"lib2","SARS-CoV-2","CCACCAAACTAAGAAA",5,19.01,10.72,-0.11,0.08,2.85,1.03,0,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","CCACCAACTAACGAAG",7,27.32,10.1,-0.74,0.09,2.7,1.04,0,">1 nonsynonymous","I142V V173S",2
"lib2","SARS-CoV-2","CCACCAAGAAAAAGCT",2,55.09,10.62,-0.22,0.06,2.88,1.09,0,"1 nonsynonymous","A33H",1
"lib2","SARS-CoV-2","CCACCAAGACCGCCTG",1,7.02,6,-4.84,2,3,1.35,0.01,">1 nonsynonymous","C61R D68L A89R Y121E",4
"lib2","SARS-CoV-2","CCACCAAGGATTTGGA",2,10.47,10.81,-0.03,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCAAGTAGTCGAT",18,270.38,10.32,-0.52,0.04,2.78,1.08,0,">1 nonsynonymous","T55P Q84E S139D",3
"lib2","SARS-CoV-2","CCACCAATGGACCATA",1,18.42,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","F47A I72S Q144V C150F",4
"lib2","SARS-CoV-2","CCACCACAAATACCCC",7,155.42,10.86,0.02,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCACCACACACAAAGT",9,131.19,9.82,-1.02,0.04,2.86,1.07,0,">1 nonsynonymous","Q163K G174P Y178T",3
"lib2","SARS-CoV-2","CCACCACAGTAAAGCA",1,18.91,10.87,0.03,0.07,2.95,1.05,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","CCACCACCACGGTTTC",6,63.19,9.52,-1.31,0.06,2.07,1.03,0,">1 nonsynonymous","G83K D90N A105I",3
"lib2","SARS-CoV-2","CCACCACCCCAAGACT",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V G86L T201L",3
"lib2","SARS-CoV-2","CCACCACCCTGATCAG",7,57.5,8.29,-2.55,0.23,2.14,1.02,0.02,">1 nonsynonymous","I2F N40R I72V S113L",4
"lib2","SARS-CoV-2","CCACCACCGGCGCTCT",11,101.71,10.44,-0.39,0.05,2.92,1.05,0,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","CCACCACCTCGTCACC",4,72.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35A V103F",2
"lib2","SARS-CoV-2","CCACCAGAGGCGTAGC",1,1.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","CCACCAGCAATCTTAA",8,2.66,NA,NA,NA,NA,NA,NA,"stop","F167C K198*",2
"lib2","SARS-CoV-2","CCACCAGCCTGTCGTT",19,157,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38K C61D G83E F99L G117P S139G C158H G166Y",8
"lib2","SARS-CoV-2","CCACCAGGGTGGCGAT",1,31.66,10.95,0.11,0.1,2.87,1.13,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","CCACCAGGTCACAAGC",1,12.54,10.98,0.14,0.07,2.94,1.06,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","CCACCAGTTCGTCCTT",6,55.11,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N64K A105P R124M",3
"lib2","SARS-CoV-2","CCACCATACCACGCAA",6,81.62,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36P L57M F134Y Y143G",4
"lib2","SARS-CoV-2","CCACCATCCATAAGCC",8,89.59,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T46K N92K S108M C150W S184A",5
"lib2","SARS-CoV-2","CCACCATCTACTGGCA",8,125.13,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","F167V",1
"lib2","SARS-CoV-2","CCACCCAACCCAAACA",5,42.18,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","T3R F167Q",2
"lib2","SARS-CoV-2","CCACCCAACGGCTATT",1,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","CCACCCAGTCTAAACA",7,83.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25S Q84H F134I T140Q P149H",5
"lib2","SARS-CoV-2","CCACCCATAGTGAAAA",4,30.44,10.5,-0.34,0.13,2.75,1.14,0.01,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","CCACCCATCCGGTTCT",3,44.31,10.25,-0.58,0.09,2.8,1.05,0,">1 nonsynonymous","Y39L R127H",2
"lib2","SARS-CoV-2","CCACCCCATCGATTTT",6,66.96,8.96,-1.87,0.05,2.94,1.05,0,">1 nonsynonymous","Y39G E154Y L187I",3
"lib2","SARS-CoV-2","CCACCCCCAAATACCA",9,36.53,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","W106L K132R F185T",3
"lib2","SARS-CoV-2","CCACCCCCAATCAAAT",3,37.68,10.94,0.1,0.06,2.97,1.06,0,">1 nonsynonymous","S43A K132R",2
"lib2","SARS-CoV-2","CCACCCCGAAGGGTCA",2,34.3,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39L G86P",2
"lib2","SARS-CoV-2","CCACCCCGAGGTCCAA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","L5M E76* G101S",3
"lib2","SARS-CoV-2","CCACCCCGATTTTCAA",2,37.25,10.1,-0.74,0.06,2.94,1.03,0,">1 nonsynonymous","N1S A42T G174K",3
"lib2","SARS-CoV-2","CCACCCCTGTTTTTAA",7,200.09,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16L F44P D68R F167E Q176I",5
"lib2","SARS-CoV-2","CCACCCGAAAGATCAA",2,59.2,10.72,-0.11,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCCGAACCGATAA",6,46.06,9.88,-0.96,0.06,2.24,1.02,0,">1 nonsynonymous","F99V S200M",2
"lib2","SARS-CoV-2","CCACCCGGTTAAGATG",3,38.72,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C158Y P177Q",2
"lib2","SARS-CoV-2","CCACCCTATACACGGG",4,44.16,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","C61K R124C L188A",3
"lib2","SARS-CoV-2","CCACCCTCTTCAAATT",2,31.33,10.88,0.05,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCCTTCCGGACAC",5,39.48,7.31,-3.53,0.29,1.5,1.13,0.02,">1 nonsynonymous","T3Y C61V S113P",3
"lib2","SARS-CoV-2","CCACCGAATATCATGT",9,54.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A42S G117V P161R G174W K199R",5
"lib2","SARS-CoV-2","CCACCGAATTTATATC",10,58.73,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I88D V180C",2
"lib2","SARS-CoV-2","CCACCGAATTTTAACT",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L F17Y I88K A105K",4
"lib2","SARS-CoV-2","CCACCGACACGATATT",1,13.43,6,-4.84,1.99,3,1.1,0.01,">1 nonsynonymous","V103T E135L T148A L162M",4
"lib2","SARS-CoV-2","CCACCGATTACAAATA",3,39.45,8.83,-2,0.09,2,1.02,0,">1 nonsynonymous","W106L Y121L",2
"lib2","SARS-CoV-2","CCACCGATTTACCGTT",2,0.92,NA,NA,NA,NA,NA,NA,"stop","R73N A81R D90* V115T",4
"lib2","SARS-CoV-2","CCACCGCAGCCAATTT",6,0.56,NA,NA,NA,NA,NA,NA,"stop","L57P T85W N118* S164Y",4
"lib2","SARS-CoV-2","CCACCGCTTCACTTTT",11,103.24,8.46,-2.37,0.07,2.15,1.08,0,">1 nonsynonymous","S45F G117T Q168Y",3
"lib2","SARS-CoV-2","CCACCGCTTCCCACTG",1,14.99,6,-4.84,2,1.5,1.06,0.01,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","CCACCGGACAGATAAT",6,69.24,10.08,-0.76,0.06,2.36,1.05,0,">1 nonsynonymous","C49V S147P S184V",3
"lib2","SARS-CoV-2","CCACCGTATGGAGAAT",1,30.23,9.99,-0.84,0.03,2.9,1.08,0,">1 nonsynonymous","G83S G174L",2
"lib2","SARS-CoV-2","CCACCTAAGCGATACA",2,69.09,10.59,-0.25,0.06,2.95,1.04,0,"1 nonsynonymous","S45K",1
"lib2","SARS-CoV-2","CCACCTACCTGCTCTG",5,0.61,NA,NA,NA,NA,NA,NA,"stop","F12Y P82V N130* G166L",4
"lib2","SARS-CoV-2","CCACCTAGAAAGAGCT",1,35.09,10.59,-0.24,0.05,3,1,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","CCACCTAGGAACTTAA",2,7.26,6,-4.84,2,1.5,1,0,">1 nonsynonymous","D112V I138C T148N Q176L S184N",5
"lib2","SARS-CoV-2","CCACCTATACCAATAG",6,62.28,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A105L P149K F185L",3
"lib2","SARS-CoV-2","CCACCTATATGAATCA",8,62.14,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S36K D97M A105K A145K",4
"lib2","SARS-CoV-2","CCACCTATTTTCCGGT",5,63.86,10.87,0.03,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCTCAACTCGAAG",15,261.74,10.21,-0.63,0.03,2.81,1.06,0,">1 nonsynonymous","G83D T148F",2
"lib2","SARS-CoV-2","CCACCTCCAAAGAACC",15,218.13,9.24,-1.6,0.05,2.2,1.07,0,">1 nonsynonymous","L60N Y121S",2
"lib2","SARS-CoV-2","CCACCTCGCGAAGAAA",9,63.49,9.03,-1.81,0.12,1.92,1.09,0.01,">1 nonsynonymous","N13V G116M",2
"lib2","SARS-CoV-2","CCACCTCTTACGATAC",4,0.22,NA,NA,NA,NA,NA,NA,"stop","C49V V52A P82S N151*",4
"lib2","SARS-CoV-2","CCACCTCTTAGGACGG",5,22.77,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41L L60G A89E P133T",4
"lib2","SARS-CoV-2","CCACCTGTCCATATAA",17,268,10.24,-0.6,0.03,2.87,1.06,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","CCACCTTAAAACATTA",5,101,10.89,0.05,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCTTACATCCTAA",3,28.36,10.55,-0.28,0.04,3,1.03,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","CCACCTTAGCTTAGTA",26,371.19,10.84,0,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACCTTATGGGGACC",1,47.14,10.65,-0.19,0.03,2.95,1.06,0,">1 nonsynonymous","A33C G152D T201M",3
"lib2","SARS-CoV-2","CCACCTTCATCAGACT",8,169.79,10.65,-0.19,0.04,2.94,1.05,0,">1 nonsynonymous","S43P T140I",2
"lib2","SARS-CoV-2","CCACCTTGGAGCCATC",3,15.39,8.14,-2.7,0.39,1.5,1.03,0.04,">1 nonsynonymous","P54F D90I S164W",3
"lib2","SARS-CoV-2","CCACCTTGTATCCAAT",8,45.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86L G101T S108G",3
"lib2","SARS-CoV-2","CCACCTTTCATTTATA",2,3.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","CCACGAAACATAGTTG",5,121.5,9.7,-1.13,0.05,2.32,1.04,0,">1 nonsynonymous","A89S Q144W",2
"lib2","SARS-CoV-2","CCACGAACATAAGAGA",9,115.16,9.53,-1.3,0.03,2.86,1.11,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","CCACGAAGAAGAAGAT",4,37.65,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P7T G101T",2
"lib2","SARS-CoV-2","CCACGAAGACTGCTAA",2,17.32,10.33,-0.51,0.07,2.96,1,0,">1 nonsynonymous","P7L P149L",2
"lib2","SARS-CoV-2","CCACGAAGAGTGATAA",12,129.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3L F12L R25G Y39V",4
"lib2","SARS-CoV-2","CCACGAAGGCCGTCTA",8,109.19,10.72,-0.12,0.05,2.95,1.04,0,">1 nonsynonymous","A42Y P54S T201H",3
"lib2","SARS-CoV-2","CCACGAATAAACAAAA",3,38.3,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","Y50P Y119S P161W",3
"lib2","SARS-CoV-2","CCACGACACGAAGTAC",14,71.38,10.09,-0.74,0.09,2.34,1,0,">1 nonsynonymous","E10G F44K A190T",3
"lib2","SARS-CoV-2","CCACGACATCATATAT",6,106.84,9.95,-0.89,0.07,2.17,1.01,0,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","CCACGACGCATCATAC",17,3.84,NA,NA,NA,NA,NA,NA,"stop","C61S K87R Y119T D137*",4
"lib2","SARS-CoV-2","CCACGACTATATTACT",4,542.82,9.11,-1.73,0.08,1.66,1.07,0,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","CCACGACTGATTCGAT",8,25.02,6,-4.84,1.8,1.5,1.11,0.02,">1 nonsynonymous","I2R R25G I72L V181L",4
"lib2","SARS-CoV-2","CCACGACTTCAAAAAA",4,106.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37Y C61A F70E Q79G F167Y K199E",6
"lib2","SARS-CoV-2","CCACGAGAACAGTAAG",9,59.24,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55I F62R P82A K94S",4
"lib2","SARS-CoV-2","CCACGAGACCAATACG",11,113.98,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","A33R C61V G101Y T201G",4
"lib2","SARS-CoV-2","CCACGAGACGATCTTT",8,123.09,6,-4.84,1.22,1.5,1.16,0.01,">1 nonsynonymous","D112W S147T",2
"lib2","SARS-CoV-2","CCACGAGATGTAACAC",8,94.48,9.85,-0.99,0.08,2.11,1.04,0,"1 nonsynonymous","V65E",1
"lib2","SARS-CoV-2","CCACGAGCCTAACGAG",4,92.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22V G51R N107L C158G Q176R",5
"lib2","SARS-CoV-2","CCACGATAAGCTCATG",3,97.84,10.82,-0.02,0.03,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACGATACTGCAATA",1,15.55,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V77E A105Y P161L L188Y",4
"lib2","SARS-CoV-2","CCACGATCCAACAGTC",1,35.64,10.31,-0.53,0.11,2.66,1.12,0.01,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","CCACGATCGTAATTCC",10,368.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40V Y91P F134S S164L",4
"lib2","SARS-CoV-2","CCACGATTCCTCAACC",10,159.04,10.88,0.04,0.06,2.96,1.04,0,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","CCACGATTCGTTCCCA",2,24.14,10.7,-0.13,0.08,2.84,1.01,0,">1 nonsynonymous","S41I D97S",2
"lib2","SARS-CoV-2","CCACGCAAGTTTAGGT",8,109.88,10.16,-0.67,0.05,2.86,1.08,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","CCACGCAATCACCGAC",2,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y P96R D98N I104M S113T Q144C P197K",7
"lib2","SARS-CoV-2","CCACGCAATTACTTAA",8,2.62,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","CCACGCAGAGAGAAAG",11,0.95,NA,NA,NA,NA,NA,NA,"stop","L5N N40L Y50*",3
"lib2","SARS-CoV-2","CCACGCAGCAAACGAA",7,44.96,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I80E C150G",2
"lib2","SARS-CoV-2","CCACGCATTGGAAACG",13,68.48,6,-4.84,2,2.23,1.11,0,">1 nonsynonymous","F99R R124E R179K K198F",4
"lib2","SARS-CoV-2","CCACGCCAACTCCAAC",6,53.94,10.13,-0.71,0.06,2.82,1.07,0,"1 nonsynonymous","Q79N",1
"lib2","SARS-CoV-2","CCACGCCCACAGCATT",5,15.63,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","W23K A33S K87G N107F T140V",5
"lib2","SARS-CoV-2","CCACGCCCGGCATCAA",7,5.16,NA,NA,NA,NA,NA,NA,"stop","N107Y S113R N120*",3
"lib2","SARS-CoV-2","CCACGCCTGAAAAGAA",9,213.38,9.23,-1.6,0.03,2.94,1.07,0,">1 nonsynonymous","T55D G117F",2
"lib2","SARS-CoV-2","CCACGCGACCCGTGCT",3,75.74,8.48,-2.36,0.14,2.47,1.12,0.01,">1 nonsynonymous","S43T Y175L",2
"lib2","SARS-CoV-2","CCACGCGACTATTATA",4,39.03,6,-4.84,2,1.5,1.36,0.02,">1 nonsynonymous","N1F G86S Y93Q R127G S139I Y143P",6
"lib2","SARS-CoV-2","CCACGCGATTACAGAA",7,211.14,10.22,-0.61,0.03,2.85,1.04,0,">1 nonsynonymous","F47C D97A",2
"lib2","SARS-CoV-2","CCACGCGGAAACCCGT",4,8.49,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","F17C P133T",2
"lib2","SARS-CoV-2","CCACGCGGAAGCTATT",14,264.56,10.43,-0.4,0.03,2.88,1.08,0,">1 nonsynonymous","G51S N64S N171H",3
"lib2","SARS-CoV-2","CCACGCGTACACAGCA",8,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V G116E D137G",3
"lib2","SARS-CoV-2","CCACGCGTTTTTACGC",2,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V Y121G R127N G155S G166S",5
"lib2","SARS-CoV-2","CCACGCTAGTGTCACG",6,70.46,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V32K G86I E141A",3
"lib2","SARS-CoV-2","CCACGCTGATAGGTTT",6,74.84,9.99,-0.85,0.11,2.36,1.04,0,">1 nonsynonymous","F44P A81S",2
"lib2","SARS-CoV-2","CCACGGAATAGTAGAA",10,120.73,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12Y T100L Y165I",3
"lib2","SARS-CoV-2","CCACGGACACGTCTTA",1,20.21,10.14,-0.7,0.13,2.44,1.11,0.01,">1 nonsynonymous","G51C C61V K199L",3
"lib2","SARS-CoV-2","CCACGGACGATTGTAA",5,62.22,7.52,-3.32,0.22,1.5,1.04,0.02,">1 nonsynonymous","T3A V11W L38Q N58S I142S",5
"lib2","SARS-CoV-2","CCACGGATGAGTATAT",1,5.19,8.76,-2.07,0.24,1.89,1.06,0.03,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","CCACGGCGACTAACCC",4,56.33,9.5,-1.34,0.06,2.53,1.06,0,">1 nonsynonymous","S139V G174R",2
"lib2","SARS-CoV-2","CCACGGCGGACGAACC",1,6.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95Y S147F F167L",3
"lib2","SARS-CoV-2","CCACGGCTCTGGGACA",7,47.59,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","I88S F99V",2
"lib2","SARS-CoV-2","CCACGGGCTGAAAATA",2,25.95,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15D R25E Q84M Y91N V173M",5
"lib2","SARS-CoV-2","CCACGGTTCGACACCA",4,63.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T46D P96W E141L T201D",4
"lib2","SARS-CoV-2","CCACGTAACCACGCGG",1,6.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R R136L",2
"lib2","SARS-CoV-2","CCACGTATAAAACCGA",5,23.65,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17M C61E Q84S F99P",4
"lib2","SARS-CoV-2","CCACGTATTACCTGCA",3,79.47,10.61,-0.23,0.04,2.91,1.08,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","CCACGTCAAGAACGCA",7,60.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12S Q176E",2
"lib2","SARS-CoV-2","CCACGTCAGGCAATGA",2,16.55,8.08,-2.75,0.23,2.69,1.01,0.03,">1 nonsynonymous","P149N C158S",2
"lib2","SARS-CoV-2","CCACGTCATATGAACA",6,121.27,10.87,0.04,0.05,2.94,1.06,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","CCACGTCGCATTCGAA",5,40.97,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G9K E76P D90I",3
"lib2","SARS-CoV-2","CCACGTCGCCCCTACC",13,67.17,10.88,0.04,0.06,2.92,1.09,0,">1 nonsynonymous","V37F D97L N120F",3
"lib2","SARS-CoV-2","CCACGTCTGAGGACTT",3,33.7,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G86S R179N",2
"lib2","SARS-CoV-2","CCACGTGGTGACGACT",11,116.32,6,-4.84,0.69,1.5,1.12,0.01,">1 nonsynonymous","Y21E Q176W",2
"lib2","SARS-CoV-2","CCACGTTGACGGACAC",11,71.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V20G P96G I104H R127M N151L",5
"lib2","SARS-CoV-2","CCACGTTGATGCAGGA",1,24.85,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C6L A22K L131G G166V T201I",5
"lib2","SARS-CoV-2","CCACTAAACTTTAATA",4,212.04,6,-4.84,1.11,1.5,1.1,0,">1 nonsynonymous","N107E V115G T148P",3
"lib2","SARS-CoV-2","CCACTAACAACCCTCA",6,54.14,9.85,-0.99,0.05,2.84,1.07,0,">1 nonsynonymous","C31M S53R L122Y",3
"lib2","SARS-CoV-2","CCACTAACCACTACAT",12,183.94,10.21,-0.62,0.03,2.87,1.06,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","CCACTAACCCACTAAG",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112S T201Y",2
"lib2","SARS-CoV-2","CCACTAACCTAATACG",2,6.41,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33R S45Y D90N D98I L122Y L162T V181R",7
"lib2","SARS-CoV-2","CCACTAAGCGGACCCG",3,23.83,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L95N C158E",2
"lib2","SARS-CoV-2","CCACTAAGCTTATAAT",10,165.22,9.1,-1.74,0.07,2.86,1.07,0,">1 nonsynonymous","A89C Y119F",2
"lib2","SARS-CoV-2","CCACTAAGGCGATCGC",5,44.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83T Y93L L95M N109L T140N P149S",6
"lib2","SARS-CoV-2","CCACTAAGTACCAGGG",5,0.07,NA,NA,NA,NA,NA,NA,"stop","T3S W23* C61F V71M I80N G117L T148A",7
"lib2","SARS-CoV-2","CCACTAATCCCACCCA",1,44.38,10.73,-0.11,0.04,2.93,1.1,0,">1 nonsynonymous","Y39N K56D",2
"lib2","SARS-CoV-2","CCACTAATCCTTCATA",13,3.93,NA,NA,NA,NA,NA,NA,"stop","I2* L38F D68E",3
"lib2","SARS-CoV-2","CCACTAATGGTCGTAA",9,162.75,9.87,-0.97,0.06,2.79,1.07,0,">1 nonsynonymous","F44P Y121L",2
"lib2","SARS-CoV-2","CCACTAATGTTGTGCA",9,211.93,9.51,-1.32,0.05,2.68,1.07,0,">1 nonsynonymous","E10S N24R D90E P169F",4
"lib2","SARS-CoV-2","CCACTACAAATCAATC",2,18.39,9.72,-1.12,0.09,2.68,1.03,0.01,"1 nonsynonymous","N118I",1
"lib2","SARS-CoV-2","CCACTACCAACACCAA",3,145.08,10.92,0.09,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCACTACCAACGTGTT",1,8.39,9.74,-1.1,0.11,2.06,1.01,0.01,">1 nonsynonymous","N24L F62S N120R",3
"lib2","SARS-CoV-2","CCACTACCTTACAATA",3,24.02,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14S E141Y G146L",3
"lib2","SARS-CoV-2","CCACTACCTTCTAAAG",4,0.81,NA,NA,NA,NA,NA,NA,"stop","T46P C49D Y66* L183D",4
"lib2","SARS-CoV-2","CCACTACGCAACCAAT",4,42.57,10.86,0.02,0.05,2.95,1.03,0,">1 nonsynonymous","I2S P197E",2
"lib2","SARS-CoV-2","CCACTACTACACGGGT",7,1.04,NA,NA,NA,NA,NA,NA,"stop","T3D S45L W106* P149I",4
"lib2","SARS-CoV-2","CCACTACTCACAAACC",11,0.73,NA,NA,NA,NA,NA,NA,"stop","F47L R136* G152*",3
"lib2","SARS-CoV-2","CCACTACTGGAAGGCG",3,39.85,10.93,0.09,0.07,2.89,1.12,0,">1 nonsynonymous","L5S S129T",2
"lib2","SARS-CoV-2","CCACTAGAATTAGCCA",14,111.58,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","G51C G74Y N92T E141H",4
"lib2","SARS-CoV-2","CCACTAGACGCATATA",2,13.1,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","R27E F47S R179G",3
"lib2","SARS-CoV-2","CCACTAGCGCGTTCTA",2,14.18,7.93,-2.91,0.36,1.5,1.26,0.04,">1 nonsynonymous","D75V A105G N120M",3
"lib2","SARS-CoV-2","CCACTAGTATGGTAAT",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41A C102A",2
"lib2","SARS-CoV-2","CCACTAGTCACCAAAT",2,60.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6P F12Q R25L A81G S113D P161R Q176T K199R",8
"lib2","SARS-CoV-2","CCACTAGTGCCTCTAA",9,43.02,6.86,-3.97,0.45,1.5,1.28,0.03,">1 nonsynonymous","C6S D90T W106F",3
"lib2","SARS-CoV-2","CCACTAGTTGATACAT",10,90.46,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P7I Y50A V115I P161S",4
"lib2","SARS-CoV-2","CCACTATAACCTACGT",3,6.64,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L5Y V11R F47N",3
"lib2","SARS-CoV-2","CCACTATCTTGAAGGT",5,21.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F T63S A89R V103T",4
"lib2","SARS-CoV-2","CCACTATCTTTACTTC",1,65.89,10.35,-0.49,0.05,2.94,1.03,0,">1 nonsynonymous","A14G A67L N120E K199V",4
"lib2","SARS-CoV-2","CCACTATTAATCATAA",7,0.95,NA,NA,NA,NA,NA,NA,"stop","T3* C61K D98N K198S",4
"lib2","SARS-CoV-2","CCACTATTACCCAGAT",3,38.64,7.05,-3.79,0.38,1.61,1.17,0.03,">1 nonsynonymous","S113M Y123I S147T S200V",4
"lib2","SARS-CoV-2","CCACTATTCGTCAAAA",9,0.68,NA,NA,NA,NA,NA,NA,"stop","A89R T100L S147* F156Q Y165C T170S",6
"lib2","SARS-CoV-2","CCACTCAAATCACCCA",1,9.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T F44L Q144T P149K Q176D",5
"lib2","SARS-CoV-2","CCACTCAACCTACAGT",4,55.32,10.62,-0.22,0.05,2.92,1.09,0,">1 nonsynonymous","S36A S139A",2
"lib2","SARS-CoV-2","CCACTCAATTGATAAG",4,16.95,6.29,-4.55,0.6,2.45,1.15,0.02,">1 nonsynonymous","F99L S113W",2
"lib2","SARS-CoV-2","CCACTCATGCCTCTTT",2,7.62,NA,NA,NA,NA,NA,NA,"stop","I72Q A81* Y93G G101V",4
"lib2","SARS-CoV-2","CCACTCCATTTCTAAT",19,267.39,10.61,-0.22,0.03,2.95,1.04,0,"1 nonsynonymous","F185L",1
"lib2","SARS-CoV-2","CCACTCCCCAATACGA",5,20.99,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S69I A105I L162P",3
"lib2","SARS-CoV-2","CCACTCCCCATACCAA",2,65.84,9.11,-1.73,0.1,2.76,1.24,0,">1 nonsynonymous","G166M H189D S200I",3
"lib2","SARS-CoV-2","CCACTCCGCACGACAA",2,35.08,9.42,-1.42,0.16,1.73,1.09,0.01,">1 nonsynonymous","V11K Q84S",2
"lib2","SARS-CoV-2","CCACTCCGTGATGACC",17,4.42,NA,NA,NA,NA,NA,NA,"stop","T3* T63M L111I R179S",4
"lib2","SARS-CoV-2","CCACTCCTAATTATCA",2,79.77,9.88,-0.96,0.1,2.46,1.06,0,">1 nonsynonymous","V37E A89N",2
"lib2","SARS-CoV-2","CCACTCCTCAGCGTCA",4,3.81,NA,NA,NA,NA,NA,NA,"stop","N107V K198*",2
"lib2","SARS-CoV-2","CCACTCCTCAGTCTCA",4,11.84,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","V103H P133G S139C T201W",4
"lib2","SARS-CoV-2","CCACTCCTTTCTATGG",5,98,9.79,-1.05,0.06,2.09,1.04,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","CCACTCGAAATTATAA",1,8.63,NA,NA,NA,NA,NA,NA,"stop","G86V L125* F167E T201E",4
"lib2","SARS-CoV-2","CCACTCGACTTTGGTG",1,51.75,9.75,-1.09,0.07,2.53,1.04,0,">1 nonsynonymous","C6Y E10Y P197R",3
"lib2","SARS-CoV-2","CCACTCGCCAACCACG",3,38.12,6.36,-4.48,0.51,1.5,1.19,0.02,">1 nonsynonymous","I28G A67Y D90I",3
"lib2","SARS-CoV-2","CCACTCGCGCTAAAAG",8,145.9,10.33,-0.51,0.06,2.79,1.1,0,">1 nonsynonymous","T15I N151D",2
"lib2","SARS-CoV-2","CCACTCGGAATCCCCA",1,11.12,10.97,0.14,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACTCGGGGAATATA",5,20.57,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","S19V T63G E135G N171I",4
"lib2","SARS-CoV-2","CCACTCTATATCAAAG",28,551.1,8.1,-2.74,0.13,1.66,1.08,0.01,">1 nonsynonymous","L5S G117A Y165V",3
"lib2","SARS-CoV-2","CCACTCTCCCCCATGA",2,15.83,10.7,-0.14,0.08,3,1,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","CCACTCTTCAACGTAG",5,56.37,10.76,-0.08,0.06,2.94,1.07,0,">1 nonsynonymous","D98Q P197G",2
"lib2","SARS-CoV-2","CCACTGAATTACAGCA",5,54.07,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S43I K87N F99G Y123M",4
"lib2","SARS-CoV-2","CCACTGAGTGTTTATA",5,86.87,10.48,-0.36,0.03,2.97,1.03,0,">1 nonsynonymous","V77L E141I",2
"lib2","SARS-CoV-2","CCACTGATAAAAAAAT",9,31.93,10.24,-0.6,0.07,2.9,1.03,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","CCACTGATAATCAGTC",2,23.79,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","S45L T55A G146P P169H",4
"lib2","SARS-CoV-2","CCACTGCAACAGAGAT",4,76.37,10.51,-0.33,0.05,2.92,1.05,0,">1 nonsynonymous","T85N F134N",2
"lib2","SARS-CoV-2","CCACTGCAGACCCTGA",1,7.14,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","W23G K94S W106G",3
"lib2","SARS-CoV-2","CCACTGCCACAACAAT",1,16,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I88G N130R E141R G152P",4
"lib2","SARS-CoV-2","CCACTGCCACAGCTTG",3,49.81,6,-4.84,2,3,1.18,0,">1 nonsynonymous","E10F A22Y S41V Q163A N171D T201Y",6
"lib2","SARS-CoV-2","CCACTGCCTGAATAAA",4,23.07,10.91,0.07,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACTGCGATACATGT",1,194.71,10.15,-0.69,0.03,2.87,1.06,0,">1 nonsynonymous","Y35L D90T G116H",3
"lib2","SARS-CoV-2","CCACTGCGTCAGACAA",8,190.55,10.3,-0.54,0.06,2.79,1.05,0,">1 nonsynonymous","N1K D90C Q168S",3
"lib2","SARS-CoV-2","CCACTGCTAAACTTGC",20,151.58,9.62,-1.22,0.07,2.04,1.06,0,">1 nonsynonymous","D90I N171I",2
"lib2","SARS-CoV-2","CCACTGGAACAAGGTT",9,0.24,NA,NA,NA,NA,NA,NA,"stop","T3L T15S Y39L T55P Y121* E186V",6
"lib2","SARS-CoV-2","CCACTGGAACGCCAAA",1,53.46,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N30M F99T P149R E154C Y175A",5
"lib2","SARS-CoV-2","CCACTGGACAATAGAT",7,293.9,9.77,-1.07,0.05,2.39,1.03,0,">1 nonsynonymous","Y39C F160N Y178S L188I",4
"lib2","SARS-CoV-2","CCACTGGACTACATTT",5,38.78,6,-4.84,1.53,1.5,1.25,0.03,">1 nonsynonymous","C49L N92S",2
"lib2","SARS-CoV-2","CCACTGGATCGATTTT",8,23.07,6,-4.84,1.71,1.5,1.16,0.03,">1 nonsynonymous","D34Y D97N D112L I142S F156T",5
"lib2","SARS-CoV-2","CCACTGGTCACTTTAG",1,10.97,10.11,-0.72,0.18,2.15,1,0.01,">1 nonsynonymous","K56H T100R Y123L P149F",4
"lib2","SARS-CoV-2","CCACTGTAAAAGAAAG",3,38.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6I D98S G117P E141V P177L S184Y",6
"lib2","SARS-CoV-2","CCACTGTATGTCTGTG",2,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W T63N K94D",3
"lib2","SARS-CoV-2","CCACTGTCTGAAAAGC",9,276.48,10.41,-0.43,0.03,2.91,1.05,0,">1 nonsynonymous","A33Q E135G",2
"lib2","SARS-CoV-2","CCACTGTGCCAGGGTA",9,129.15,8.28,-2.56,0.12,2.63,1.05,0.01,">1 nonsynonymous","P7S V37T F44T Y119G F156S",5
"lib2","SARS-CoV-2","CCACTGTGGACAATGA",4,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M W23L L57F",3
"lib2","SARS-CoV-2","CCACTGTTTCATCTAC",11,158.18,8.38,-2.46,0.1,2.77,1.08,0,">1 nonsynonymous","T55H N120K Y143N",3
"lib2","SARS-CoV-2","CCACTTAAAGATTGAA",6,33.54,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","N92D N107R S139G F185I",4
"lib2","SARS-CoV-2","CCACTTAAATTATAAT",4,77.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37T V77C Y93V Y119T C150D T201S",6
"lib2","SARS-CoV-2","CCACTTAACCGTTCAA",3,0.89,NA,NA,NA,NA,NA,NA,"stop","G9L P82* Y91K G166Y",4
"lib2","SARS-CoV-2","CCACTTAATATGACCT",5,81.06,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","I2E F99S P177F",3
"lib2","SARS-CoV-2","CCACTTAATGTGACTA",3,50.31,9.53,-1.3,0.12,2.55,1.05,0.01,">1 nonsynonymous","G9P G155V",2
"lib2","SARS-CoV-2","CCACTTACCAAATGGG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S43* A89Q R136L P149S V181C",5
"lib2","SARS-CoV-2","CCACTTACCCAAAATT",4,39.9,9.47,-1.36,0.15,2.09,1.09,0.01,">1 nonsynonymous","S43R P133D G155H",3
"lib2","SARS-CoV-2","CCACTTACGAAATCCC",1,29.09,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R25I L125V T148Y F156L P169M",5
"lib2","SARS-CoV-2","CCACTTATACTATTTG",5,12.05,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","E76K S113F N120R R136I V173I",5
"lib2","SARS-CoV-2","CCACTTATCCATAACT",3,65.01,10.87,0.03,0.04,2.95,1.06,0,">1 nonsynonymous","N64S V115P",2
"lib2","SARS-CoV-2","CCACTTATGTTACGCA",3,14.71,10.18,-0.66,0.13,2.66,1.02,0.01,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","CCACTTCAATTTTACG",5,76.8,10.07,-0.77,0.06,2.65,1.01,0,">1 nonsynonymous","N13F N64D T148A",3
"lib2","SARS-CoV-2","CCACTTCACGTATTTA",6,15.99,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","I88G",1
"lib2","SARS-CoV-2","CCACTTGAACTAAAAA",2,55.57,8.87,-1.97,0.07,2.98,1.06,0,">1 nonsynonymous","C61A G117P",2
"lib2","SARS-CoV-2","CCACTTGCATGATTCA",3,50.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R27P V77A K94I",3
"lib2","SARS-CoV-2","CCACTTGCATTGTGCA",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S41T T46K F47V D90L",5
"lib2","SARS-CoV-2","CCACTTGTATATTTGG",7,30.67,6,-4.84,1.21,1.5,1.05,0.01,">1 nonsynonymous","C6S G86S N120I S129I",4
"lib2","SARS-CoV-2","CCACTTTAAATAAGTG",9,168.24,8.51,-2.32,0.1,2.97,1.11,0,">1 nonsynonymous","N64A Y119E G166E",3
"lib2","SARS-CoV-2","CCACTTTACAAAATGG",5,27.84,8.01,-2.82,0.21,1.5,1.07,0.02,">1 nonsynonymous","C6V C61V T85Y I138P",4
"lib2","SARS-CoV-2","CCACTTTATGAAGCTA",3,22.73,10.73,-0.11,0.03,3,1.01,0,">1 nonsynonymous","K48L G152N",2
"lib2","SARS-CoV-2","CCACTTTATGACAGGA",1,1.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CCACTTTCAGTTAGCT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A A105D Y123G",3
"lib2","SARS-CoV-2","CCACTTTCGTTAAACA",3,13.72,10.93,0.1,0.1,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCACTTTGACGCGGCA",9,165.25,10.3,-0.54,0.02,2.88,1.05,0,">1 nonsynonymous","S53I N120L K132S",3
"lib2","SARS-CoV-2","CCACTTTGACGTACCC",5,74.05,9.83,-1.01,0.04,2.24,1.06,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","CCACTTTTTATGTTTA",1,0.26,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCAGAAAAAACAAATA",6,12.73,NA,NA,NA,NA,NA,NA,"stop","T55V E76* T201A",3
"lib2","SARS-CoV-2","CCAGAAAACAACAAAT",9,167.79,10.2,-0.63,0.04,2.77,1.05,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","CCAGAAAACCATCAAA",1,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R K56F A89G G174W Y178T",5
"lib2","SARS-CoV-2","CCAGAAAACGGCTCCA",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G A14F S41D V65I Y121P N171F",6
"lib2","SARS-CoV-2","CCAGAAAATACGCTAT",2,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88T K94Y V103L Q176F S184G",5
"lib2","SARS-CoV-2","CCAGAAAATATGTCAC",2,31.88,6.07,-4.77,1.21,1.5,1.18,0.03,">1 nonsynonymous","G117K R127S G152K",3
"lib2","SARS-CoV-2","CCAGAAACAGAAATTG",4,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R K114P I142L",3
"lib2","SARS-CoV-2","CCAGAAACGTCTAATC",8,4.25,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib2","SARS-CoV-2","CCAGAAATGGTTATTC",10,182.19,10.16,-0.68,0.03,2.95,1.06,0,">1 nonsynonymous","N1P E154L",2
"lib2","SARS-CoV-2","CCAGAACAGGAACCTA",2,2.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","CCAGAACATGCGAAAT",3,24.46,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y50D Y91R G116D Y143M P169S",5
"lib2","SARS-CoV-2","CCAGAACATTACGCAG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","L125T G146*",2
"lib2","SARS-CoV-2","CCAGAACCAATATAAA",3,242.38,10.81,-0.02,0.05,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGAACCTTAATATT",2,50.36,10.82,-0.01,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGAACTAAACTTCA",2,21.98,10.68,-0.15,0.07,2.9,1.04,0,">1 nonsynonymous","S36V K114T",2
"lib2","SARS-CoV-2","CCAGAACTTCGAGATC",2,27.79,9.19,-1.65,0.05,2.91,1.14,0,">1 nonsynonymous","G83Y G117S",2
"lib2","SARS-CoV-2","CCAGAAGAGACAATAA",2,36.73,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F44L V52D L60K S69I A89L L131A",6
"lib2","SARS-CoV-2","CCAGAAGCACCTCAAC",7,31.75,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","E10I L60T G101S C158S",4
"lib2","SARS-CoV-2","CCAGAAGCTAGGCACT",2,31.26,6.28,-4.55,0.73,1.5,1.17,0.02,">1 nonsynonymous","T55R D112A R136A C158R",4
"lib2","SARS-CoV-2","CCAGAAGTAAGCCATA",2,1.08,NA,NA,NA,NA,NA,NA,"stop","K128* T201G",2
"lib2","SARS-CoV-2","CCAGAATATAACGGCA",1,12.38,8.66,-2.18,0.15,2.69,1,0.01,">1 nonsynonymous","S41P Y119L T148F",3
"lib2","SARS-CoV-2","CCAGAATCATTAGTAG",7,136.62,10.48,-0.35,0.03,2.95,1.07,0,">1 nonsynonymous","T3R Y121F A192C",3
"lib2","SARS-CoV-2","CCAGAATCCAAACACA",2,41.33,10.82,-0.01,0.04,2.96,1.04,0,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","CCAGAATCTCTTCTAG",14,137,6.12,-4.72,1.01,1.5,1.23,0.04,">1 nonsynonymous","Y91T N120M N157D",3
"lib2","SARS-CoV-2","CCAGAATGTGCAATGC",10,73.66,6.05,-4.78,1.23,1.5,1.18,0.03,">1 nonsynonymous","A89F G117L N130H",3
"lib2","SARS-CoV-2","CCAGAATTAGCAAAAA",2,48.62,10.3,-0.54,0.09,2.78,1.07,0,">1 nonsynonymous","A42V D90F",2
"lib2","SARS-CoV-2","CCAGAATTTCATGGCG",7,74.41,10.74,-0.1,0.05,2.96,1.05,0,">1 nonsynonymous","V37F A42F F62E T140S",4
"lib2","SARS-CoV-2","CCAGACAAACTCATGT",4,44.79,6,-4.84,2,3,1.2,0,">1 nonsynonymous","R25L C61K S108Y I142A P161S",5
"lib2","SARS-CoV-2","CCAGACAAGTACTGTA",21,171.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I80R L162A",2
"lib2","SARS-CoV-2","CCAGACAGAAACATTA",5,112.85,10.87,0.04,0.07,2.99,1.03,0,"1 nonsynonymous","I138T",1
"lib2","SARS-CoV-2","CCAGACATACCCACTA",4,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R R16F T85W",3
"lib2","SARS-CoV-2","CCAGACATCAGCAAAT",2,22.68,8.26,-2.57,0.24,1.5,1.03,0.03,">1 nonsynonymous","C49F N107P A145M",3
"lib2","SARS-CoV-2","CCAGACATCAGGCCCC",3,15.63,6.41,-4.43,0.9,1.5,1.29,0.04,">1 nonsynonymous","D90I W106K",2
"lib2","SARS-CoV-2","CCAGACATCCAAAGAC",11,68.77,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","V65C F99G",2
"lib2","SARS-CoV-2","CCAGACATTTCAGACG",5,47.74,10.01,-0.82,0.09,2.44,1,0,">1 nonsynonymous","R25T V65L",2
"lib2","SARS-CoV-2","CCAGACCAAGTCTTGT",10,75.85,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y35T D98L Q168P",3
"lib2","SARS-CoV-2","CCAGACCAGCCCTCAT",10,69.58,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6Q K94E E141T",3
"lib2","SARS-CoV-2","CCAGACCATACATGAT",3,20.66,9.43,-1.41,0.1,2,1.01,0.01,">1 nonsynonymous","Y35N L57P",2
"lib2","SARS-CoV-2","CCAGACCCCCACACAT",11,204.36,10.13,-0.71,0.08,2.51,1.03,0,">1 nonsynonymous","F62I A105C",2
"lib2","SARS-CoV-2","CCAGACCCTAATGCCG",2,1.4,NA,NA,NA,NA,NA,NA,"stop","A14N Y21D T55L D98* E141K G166C",6
"lib2","SARS-CoV-2","CCAGACCGATGTTTTC",2,10.6,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","F12V N157R Y165N",3
"lib2","SARS-CoV-2","CCAGACGCCGAAAGGG",4,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P L60T G83C F99D",4
"lib2","SARS-CoV-2","CCAGACGTTCGCGTGA",6,128.19,10.26,-0.58,0.04,2.89,1.09,0,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","CCAGACTCACGAAATT",1,5.59,10.52,-0.31,0.13,2.83,1.13,0.01,">1 nonsynonymous","G83H E141K T148L Q168S",4
"lib2","SARS-CoV-2","CCAGACTCGGCCCTAT",4,5.57,8.71,-2.12,0.1,2.52,1,0.01,">1 nonsynonymous","C31T F126I T201M",3
"lib2","SARS-CoV-2","CCAGACTGCGCATACA",2,26.05,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C49Y N58H F167T",3
"lib2","SARS-CoV-2","CCAGACTTACTTCGCT",7,170.98,10.77,-0.07,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAGAGAAGAGACCAT",2,14.41,7.14,-3.7,0.3,2.16,1.08,0.02,">1 nonsynonymous","C6A Y91T",2
"lib2","SARS-CoV-2","CCAGAGAAGTGTAGTT",1,24.47,9.99,-0.84,0.15,2.35,1.06,0.01,">1 nonsynonymous","D97Q S139F",2
"lib2","SARS-CoV-2","CCAGAGACACAATGCA",2,19.27,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V37Y T55C L95R A145C N151K",5
"lib2","SARS-CoV-2","CCAGAGACGCAACGCA",8,12.56,6.78,-4.06,0.44,1.5,1.03,0.04,">1 nonsynonymous","N1S K87R L95P",3
"lib2","SARS-CoV-2","CCAGAGACTAATTTGG",1,18.63,10.28,-0.56,0.09,2.97,1,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","CCAGAGCAAAATCGTG",3,15,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","T85L V180H",2
"lib2","SARS-CoV-2","CCAGAGCACACTAAAT",4,1.55,NA,NA,NA,NA,NA,NA,"stop","L5N T55* I104N",3
"lib2","SARS-CoV-2","CCAGAGCCAAAGTAAT",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53C T100W P149R",3
"lib2","SARS-CoV-2","CCAGAGCCGGGAGCAG",22,223.34,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43N I80K A89Q N120A F160G",5
"lib2","SARS-CoV-2","CCAGAGCGCCTCAAGA",3,20.35,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A14D C49L D68H",3
"lib2","SARS-CoV-2","CCAGAGGAAAAATGGT",7,70.48,9.78,-1.05,0.08,1.96,1.06,0,">1 nonsynonymous","A81T D98I",2
"lib2","SARS-CoV-2","CCAGAGGAGAAATGAC",2,94.56,10.77,-0.06,0.04,2.91,1.11,0,">1 nonsynonymous","S41T P149S",2
"lib2","SARS-CoV-2","CCAGAGGATCTCTGCG",13,152.51,9.76,-1.08,0.03,2.97,1.06,0,"1 nonsynonymous","Q168E",1
"lib2","SARS-CoV-2","CCAGAGGCTTAATTTT",6,81.91,6.45,-4.39,0.46,1.5,1.18,0.02,">1 nonsynonymous","V11S K94L",2
"lib2","SARS-CoV-2","CCAGAGGGACTGAGAT",3,18.75,10.38,-0.45,0.08,2.97,1,0,">1 nonsynonymous","A22E A42S E141K",3
"lib2","SARS-CoV-2","CCAGAGGGGCGTACGG",5,5.32,10.81,-0.03,0.09,2.94,1.1,0,">1 nonsynonymous","A42K R127N",2
"lib2","SARS-CoV-2","CCAGAGGGGTGATGAG",1,50.57,10.14,-0.69,0.09,2.33,1.03,0,"1 nonsynonymous","W23P",1
"lib2","SARS-CoV-2","CCAGAGTAACTTAGCT",3,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R V103A T201V",3
"lib2","SARS-CoV-2","CCAGAGTACAGCCTTA",2,17.83,11.03,0.19,0.08,2.93,1.09,0,"1 nonsynonymous","D90Q",1
"lib2","SARS-CoV-2","CCAGAGTATAACCCCC",3,69.3,9.8,-1.04,0.07,2.11,1.03,0,">1 nonsynonymous","K26E P54S D98S G116K",4
"lib2","SARS-CoV-2","CCAGAGTTATATCGTC",3,94.43,6.57,-4.26,0.36,1.5,1.14,0.01,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","CCAGATAAAACTCAAA",4,79.91,10.89,0.05,0.06,2.97,1.05,0,"1 nonsynonymous","A190T",1
"lib2","SARS-CoV-2","CCAGATAAATTATGAG",6,37.11,6,-4.84,2,3,1.11,0,">1 nonsynonymous","P7L Y93R G174N",3
"lib2","SARS-CoV-2","CCAGATAAGCGTTAAG",6,166.39,6.12,-4.72,0.57,1.5,1.15,0.01,">1 nonsynonymous","S19L C61W",2
"lib2","SARS-CoV-2","CCAGATAATACGAGAC",10,76.93,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","E154C F167H T201L",3
"lib2","SARS-CoV-2","CCAGATACTCGCACGC",2,28.2,10.13,-0.7,0.06,2.86,1.06,0,">1 nonsynonymous","R16M N40D T55K L95M",4
"lib2","SARS-CoV-2","CCAGATAGGCCCATTA",8,131.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S53A G86W N92L Y121A",4
"lib2","SARS-CoV-2","CCAGATATGGCTTTAA",1,40.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2V D112G G146T",3
"lib2","SARS-CoV-2","CCAGATCAACTTTAGT",9,51.91,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S36I A105L Y143L",3
"lib2","SARS-CoV-2","CCAGATCAGGAGTACA",5,9.8,NA,NA,NA,NA,NA,NA,"stop","A42L Q79R K114* I142* Y178F",5
"lib2","SARS-CoV-2","CCAGATCCCACATAAG",1,30.77,6,-4.84,1.88,3,1.2,0.01,">1 nonsynonymous","A42N D112T N157G",3
"lib2","SARS-CoV-2","CCAGATCGCCCAGAAG",10,158.63,9.23,-1.61,0.03,2.88,1.1,0,">1 nonsynonymous","T3R Y119P S147A",3
"lib2","SARS-CoV-2","CCAGATCTATGGACGA",1,13.78,10.63,-0.2,0.09,3,1.02,0.01,"1 nonsynonymous","F160P",1
"lib2","SARS-CoV-2","CCAGATCTCTAAGACT",7,43.22,10.21,-0.63,0.05,2.83,1.06,0,">1 nonsynonymous","E10R L60K",2
"lib2","SARS-CoV-2","CCAGATGAATCTACAA",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L T15G C150F Y165M",4
"lib2","SARS-CoV-2","CCAGATGATAGGGATA",1,26.75,10.49,-0.35,0.07,2.9,1.09,0,">1 nonsynonymous","S41Y I142V T148R",3
"lib2","SARS-CoV-2","CCAGATGATTCAAGAT",5,59.95,10.24,-0.6,0.02,2.94,1.05,0,">1 nonsynonymous","L5S C61F D97V L122W V173I",5
"lib2","SARS-CoV-2","CCAGATGGAAGGAGGT",6,3.73,NA,NA,NA,NA,NA,NA,"stop","I72* G152C Q168N V182L",4
"lib2","SARS-CoV-2","CCAGATGGCAATATAC",8,169.48,10.08,-0.75,0.03,2.87,1.02,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","CCAGATGGGACAAGAC",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T S139V",2
"lib2","SARS-CoV-2","CCAGATTAATCAAACA",2,11.5,6.26,-4.58,0.75,1.5,1.08,0.02,"1 nonsynonymous","V103F",1
"lib2","SARS-CoV-2","CCAGATTAATTGCAGT",5,27.77,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N4L T55S N64T G83V I88N",5
"lib2","SARS-CoV-2","CCAGATTATTAGGAGG",1,51.79,8.31,-2.53,0.18,2.94,1.03,0.01,">1 nonsynonymous","I2V P149E N157F K199Y",4
"lib2","SARS-CoV-2","CCAGATTCTAAAAATT",1,7.16,10.04,-0.8,0.14,2.13,1.05,0,">1 nonsynonymous","L5R Y93F Q144S",3
"lib2","SARS-CoV-2","CCAGATTTCCACCTCA",5,174.05,10.69,-0.14,0.05,2.91,1.08,0,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","CCAGATTTTCGTGGAC",3,35.82,10.61,-0.23,0.05,2.91,1.07,0,">1 nonsynonymous","L5N A14N",2
"lib2","SARS-CoV-2","CCAGCAAACTAAGTTG",15,4.22,NA,NA,NA,NA,NA,NA,"stop","N4A C102W G116* R136F",4
"lib2","SARS-CoV-2","CCAGCAAAGCACAGCC",9,205.37,10.19,-0.65,0.05,2.72,1.02,0,">1 nonsynonymous","D59V N64V D97H",3
"lib2","SARS-CoV-2","CCAGCAAATCAACAAC",4,85.86,9.43,-1.41,0.07,2.2,1.04,0,">1 nonsynonymous","N58V Y121K",2
"lib2","SARS-CoV-2","CCAGCAACAATCTCAA",1,23.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40R I142Q P161R",3
"lib2","SARS-CoV-2","CCAGCAACCCCCCGAT",8,145.29,9.74,-1.1,0.06,2.6,1,0,">1 nonsynonymous","D90G G155S",2
"lib2","SARS-CoV-2","CCAGCAACTAGGGTGA",1,62.01,9.6,-1.23,0.06,2.74,1.11,0,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","CCAGCAACTTAACAGC",5,31.74,10.79,-0.04,0.06,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGCAACTTATAACA",4,19.33,8.94,-1.9,0.31,1.5,1.04,0.03,">1 nonsynonymous","D59P T100K I104G T201L",4
"lib2","SARS-CoV-2","CCAGCAATCTAACCTT",3,31.9,8.62,-2.21,0.11,1.91,1.08,0.01,">1 nonsynonymous","D98P G146F L188M",3
"lib2","SARS-CoV-2","CCAGCAATTCAGATTA",3,35.66,6,-4.84,2,3,1.23,0,">1 nonsynonymous","V11A L38R Y119S",3
"lib2","SARS-CoV-2","CCAGCACAAAATTGGT",2,6.99,9.88,-0.96,0.13,2.54,1.04,0.01,"1 nonsynonymous","F17S",1
"lib2","SARS-CoV-2","CCAGCACCTAGATAAT",3,0.46,NA,NA,NA,NA,NA,NA,"stop","Y50F N107* S139C G146K",4
"lib2","SARS-CoV-2","CCAGCACCTAGGGAGA",4,7.23,6.03,-4.81,2,1.5,1.06,0.01,">1 nonsynonymous","L5V W106K G146C S184R",4
"lib2","SARS-CoV-2","CCAGCACCTTCGACTG",4,43.31,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","K128P E135W Y143I P149L F156L Y178S",6
"lib2","SARS-CoV-2","CCAGCACGAATATTAA",8,173.01,10.81,-0.02,0.03,2.93,1.07,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","CCAGCACGAATCTTGG",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R S41F N92E Q168W",4
"lib2","SARS-CoV-2","CCAGCACGGTTCTATG",8,67.45,10.77,-0.06,0.04,2.93,1.09,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","CCAGCACTAAGATTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","D97W T201*",2
"lib2","SARS-CoV-2","CCAGCACTGGTCAGAA",1,1.72,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","CCAGCACTTACGCTGA",7,50.1,9.67,-1.16,0.09,1.93,1.03,0,">1 nonsynonymous","E10V K114A S139A L162V V173L",5
"lib2","SARS-CoV-2","CCAGCAGCTTAGGCCA",8,23.2,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14V Y121M S139V G152S V181S",5
"lib2","SARS-CoV-2","CCAGCAGGTTGGTGAT",5,24.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95P L122R P149M",3
"lib2","SARS-CoV-2","CCAGCATCGCTTTCAG",3,23.08,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R25P I80R L95P N118M",4
"lib2","SARS-CoV-2","CCAGCATGCCGTCCGG",6,11.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14L S41L P161T",3
"lib2","SARS-CoV-2","CCAGCATGTCTTGTCA",9,25.69,6,-4.84,2,1.5,1.36,0.04,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","CCAGCCATGGGCAGCC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","CCAGCCATTCTTGTTG",2,17.19,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","N4Y D68P V103G Y121R",4
"lib2","SARS-CoV-2","CCAGCCCCGGACTCAA",9,26.78,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L183H T201W",2
"lib2","SARS-CoV-2","CCAGCCCTACCTTAAT",1,5.84,9.5,-1.34,0.3,1.62,1.37,0.04,">1 nonsynonymous","F134V T140E P149V",3
"lib2","SARS-CoV-2","CCAGCGACTAAGTCAA",4,21.6,7.19,-3.65,0.24,1.52,1.16,0.02,">1 nonsynonymous","V11T N107T V115F",3
"lib2","SARS-CoV-2","CCAGCGAGCGTAGCCG",8,29.02,6.24,-4.6,0.75,1.5,1.12,0.02,">1 nonsynonymous","S41N W106G R127E G155W",4
"lib2","SARS-CoV-2","CCAGCGAGCGTATAAC",2,38.71,9.95,-0.88,0.06,2.79,1.06,0,">1 nonsynonymous","C6N G174S",2
"lib2","SARS-CoV-2","CCAGCGATATGTAAAA",5,112.48,10.86,0.02,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGCGCATTAAGGGA",3,60.28,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I28L F70I G101T P161M G174F",5
"lib2","SARS-CoV-2","CCAGCGCTTAAACACC",2,11.9,6.71,-4.13,0.62,1.5,1,0.06,">1 nonsynonymous","G74Y Y119S R127F K198M",4
"lib2","SARS-CoV-2","CCAGCGGCTCGCATTC",2,5.15,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6L G51E",2
"lib2","SARS-CoV-2","CCAGCGGGAACCCTAT",3,78.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10Y L38R K87G G101R N151F",5
"lib2","SARS-CoV-2","CCAGCGTGGCATAAAC",1,21.51,9.38,-1.45,0.09,2.92,1.13,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","CCAGCTAACTAACATA",3,57.27,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12L S36L P96F W106V Y121N",5
"lib2","SARS-CoV-2","CCAGCTACTACCGATT",2,24.41,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N40I A89H T100K",3
"lib2","SARS-CoV-2","CCAGCTAGATCCGCCA",2,17.05,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","N24F D59V F99Y L162Y",4
"lib2","SARS-CoV-2","CCAGCTAGTGCGACAT",4,164.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A89C S129P Y178K",3
"lib2","SARS-CoV-2","CCAGCTCAACTCAGTA",4,31.36,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","P161M G174E",2
"lib2","SARS-CoV-2","CCAGCTCAATATAATA",5,40.53,8.05,-2.79,0.49,1.5,1.15,0.07,">1 nonsynonymous","S41C N118I R136W",3
"lib2","SARS-CoV-2","CCAGCTCACCATAGGC",6,3.15,NA,NA,NA,NA,NA,NA,"stop","G86P V115*",2
"lib2","SARS-CoV-2","CCAGCTCAGGCGAACA",11,36.97,7.65,-3.19,0.2,1.66,1.14,0.01,">1 nonsynonymous","D34L K87S Q144H F156R",4
"lib2","SARS-CoV-2","CCAGCTCATTCCCGAG",5,28.14,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S19N D137P G146S",3
"lib2","SARS-CoV-2","CCAGCTCGTTGCAGGA",8,16.04,6.56,-4.28,0.75,1.5,1.26,0.07,">1 nonsynonymous","P7R N13L A89R",3
"lib2","SARS-CoV-2","CCAGCTGATGCTGTCG",3,85.45,9.7,-1.14,0.09,1.91,1.1,0,">1 nonsynonymous","P7N N109K Y123G",3
"lib2","SARS-CoV-2","CCAGCTTAAAGATTCT",2,11.71,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13T T85S F126I V180Y",4
"lib2","SARS-CoV-2","CCAGCTTATACAACAC",2,0.95,NA,NA,NA,NA,NA,NA,"stop","K56C K87* D98Y T201*",4
"lib2","SARS-CoV-2","CCAGCTTTCCTTCGAC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","Y35P D112N G174*",3
"lib2","SARS-CoV-2","CCAGGAAATAAGTGTA",1,76.1,10.74,-0.09,0.04,2.9,1.09,0,">1 nonsynonymous","L38I L122Y",2
"lib2","SARS-CoV-2","CCAGGAACAAATGAAA",13,3.84,NA,NA,NA,NA,NA,NA,"stop","S45I L95V L125P I138* F160L P177F R179M T201Q",8
"lib2","SARS-CoV-2","CCAGGAATCAGAGAGC",10,165.49,10.33,-0.5,0.03,2.96,1,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","CCAGGAATCAGGTGAT",9,72.62,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V20W D34E S36V A105N Y143L",5
"lib2","SARS-CoV-2","CCAGGACGACGCCTCA",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31P V77R L95S",3
"lib2","SARS-CoV-2","CCAGGACTGATCGTAT",7,160.14,10.9,0.06,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGGAGAACTATTTC",9,155.32,9.65,-1.19,0.07,1.97,1.04,0,">1 nonsynonymous","K56G R127S G155K",3
"lib2","SARS-CoV-2","CCAGGATAAAAAAAAA",4,38.28,6.47,-4.36,0.49,1.5,1.15,0.03,">1 nonsynonymous","L38S D90W G174E",3
"lib2","SARS-CoV-2","CCAGGATAAAAAATAG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","N58* G86F V103N Y178S",4
"lib2","SARS-CoV-2","CCAGGATAAAAACATA",1,0.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181E",1
"lib2","SARS-CoV-2","CCAGGATAAATAGCAG",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T Q84L T100I K114E F167N",5
"lib2","SARS-CoV-2","CCAGGATACGAATTAC",3,166.44,10.84,0,0.05,2.94,1.08,0,">1 nonsynonymous","V37H G51N",2
"lib2","SARS-CoV-2","CCAGGATCAAGATAAA",8,33.41,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44S L57A G83V",3
"lib2","SARS-CoV-2","CCAGGATCCATGGAAA",3,14.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D F70V L125R V153P",4
"lib2","SARS-CoV-2","CCAGGATTACTAGAAA",3,88.65,10.8,-0.04,0.06,2.87,1.13,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","CCAGGCAAAAATTGAT",4,68.88,10.16,-0.68,0.05,2.85,1,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","CCAGGCAAACAGTTCT",4,38.63,10.95,0.11,0.08,2.92,1.1,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","CCAGGCAGATCTCGGC",2,44.11,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","W23L N30L",2
"lib2","SARS-CoV-2","CCAGGCATGATGTGGA",2,35.88,10.88,0.04,0.08,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGGCCAAAAACCAA",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100H T140K T201F",3
"lib2","SARS-CoV-2","CCAGGCCAATCCAATA",7,99.01,9.04,-1.8,0.11,1.7,1.09,0.01,">1 nonsynonymous","K56I S69L",2
"lib2","SARS-CoV-2","CCAGGCCACGCTGGCA",3,15.28,10.87,0.03,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGGCCCATCAGACC",7,99.09,9.91,-0.93,0.04,2.92,1.07,0,"1 nonsynonymous","P169D",1
"lib2","SARS-CoV-2","CCAGGCCCCCCTCGGC",3,34.17,10.97,0.13,0.12,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGGCGAGAGCCCCT",5,50.09,9.64,-1.2,0.1,2.05,1.02,0,">1 nonsynonymous","T63H D90G K94A",3
"lib2","SARS-CoV-2","CCAGGCGTTCCATCAA",1,42.28,10.61,-0.22,0.08,2.82,1.13,0,">1 nonsynonymous","D59K T201V",2
"lib2","SARS-CoV-2","CCAGGCTAATTTTGAG",7,48.29,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G101A E141G",2
"lib2","SARS-CoV-2","CCAGGCTGTAAACGTT",12,62.51,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F47S G83K K114W S139V",4
"lib2","SARS-CoV-2","CCAGGGAATTAAGTAC",4,136.24,7.98,-2.85,0.15,2.16,1.07,0.01,">1 nonsynonymous","T46L K87C Y119S Y143L",4
"lib2","SARS-CoV-2","CCAGGGCCGGCTAAAG",2,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W N13R A42S K48S S129L L183F",6
"lib2","SARS-CoV-2","CCAGGGGCAAACTTGA",1,7.56,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","N58I R124K S147I",3
"lib2","SARS-CoV-2","CCAGGGGGCTGTACTT",1,13.25,10.79,-0.05,0.1,2.81,1.2,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCAGGGGTCAAAACGA",2,43.63,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","Y50M L122H Q144R V173G",4
"lib2","SARS-CoV-2","CCAGGGTAACTATTAC",4,118.75,10.38,-0.45,0.05,2.89,1.09,0,">1 nonsynonymous","G9E N64H A105T N120L",4
"lib2","SARS-CoV-2","CCAGGGTCTGGGAGGT",5,63.29,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T100I D112R K128N S139R",4
"lib2","SARS-CoV-2","CCAGGGTCTTTTCTTT",1,8.09,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N58K R73E K94P P149V V153N V173N V181A",7
"lib2","SARS-CoV-2","CCAGGGTTACATGAAC",3,18.62,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","F12V N92V G152H",3
"lib2","SARS-CoV-2","CCAGGTAAAAGTAGTA",13,176.48,10.85,0.01,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGGTAAACGAAACA",3,16.49,8.47,-2.37,0.11,1.87,1.09,0.01,">1 nonsynonymous","A14G P133G T140Y T148V",4
"lib2","SARS-CoV-2","CCAGGTAAATTAGGAC",3,0.47,NA,NA,NA,NA,NA,NA,"stop","S19* Y178L",2
"lib2","SARS-CoV-2","CCAGGTACTCTACCCG",2,60.22,9.03,-1.8,0.1,1.8,1.1,0,">1 nonsynonymous","I2G R16T N24W V37N T140L P149A",6
"lib2","SARS-CoV-2","CCAGGTAGGTCAGTTA",2,31.2,6,-4.84,2,2.25,1.09,0,">1 nonsynonymous","T55N V77K K114Y G146R F167L",5
"lib2","SARS-CoV-2","CCAGGTATAAAGCAAA",12,261.45,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D59T C158F",2
"lib2","SARS-CoV-2","CCAGGTATGGCAGGTT",4,57.09,9.51,-1.32,0.09,2.09,1.03,0,">1 nonsynonymous","S45D D137N",2
"lib2","SARS-CoV-2","CCAGGTCAAGTCCAAA",5,34.18,9.58,-1.26,0.14,1.63,1.12,0.01,">1 nonsynonymous","F8E T85V",2
"lib2","SARS-CoV-2","CCAGGTGCACATTTGA",5,118.13,6.23,-4.61,0.57,1.5,1.13,0.01,">1 nonsynonymous","C61L Y143R F156L G172W P177L",5
"lib2","SARS-CoV-2","CCAGGTTCTTTCAACC",4,50.66,10.79,-0.05,0.06,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAGGTTTAAGACGCA",8,103.56,10.1,-0.73,0.02,2.97,1.02,0,"1 nonsynonymous","F156Q",1
"lib2","SARS-CoV-2","CCAGGTTTCACAGCAT",1,31.98,8.23,-2.61,0.15,2.63,1,0.01,">1 nonsynonymous","G9W Y143N",2
"lib2","SARS-CoV-2","CCAGGTTTCCGTATAA",3,54.82,10.4,-0.44,0.05,2.87,1.12,0,">1 nonsynonymous","N64Y E154T G174R",3
"lib2","SARS-CoV-2","CCAGTAAAAACCCACC",16,1.02,NA,NA,NA,NA,NA,NA,"stop","P54C K87T E135A N157*",4
"lib2","SARS-CoV-2","CCAGTAAAATCCATAA",7,38.85,6.88,-3.95,0.34,1.5,1.13,0.02,">1 nonsynonymous","R27S S45C E76G",3
"lib2","SARS-CoV-2","CCAGTAAATATACGTC",1,40.92,6.07,-4.77,0.67,1.5,1.11,0.01,">1 nonsynonymous","I2C D97P R127G P149S G166K",5
"lib2","SARS-CoV-2","CCAGTAACCGGAGACC",13,150.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9M G101C",2
"lib2","SARS-CoV-2","CCAGTAACGTGGCAGT",2,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I D112L",2
"lib2","SARS-CoV-2","CCAGTAAGATACTAAT",2,67.03,10.09,-0.75,0.06,2.77,1.01,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","CCAGTAATACTAGCGG",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R W106R G116D L183N",4
"lib2","SARS-CoV-2","CCAGTACAATACAATT",4,90.3,10.84,0,0.05,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CCAGTAGAGGCATAAA",2,0.42,NA,NA,NA,NA,NA,NA,"stop","S29L S36L Y123* F134T",4
"lib2","SARS-CoV-2","CCAGTAGGGACAATCG",1,30.97,7.23,-3.6,0.25,1.68,1.13,0.01,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","CCAGTAGTACAGATAG",1,20.33,10.93,0.09,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGTATAAAGAAGGA",4,25.62,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S43A Y93T Y121P Q163K A190D",5
"lib2","SARS-CoV-2","CCAGTATACAGACGTG",5,27.77,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P7K A81T G152K V182N",4
"lib2","SARS-CoV-2","CCAGTATCGGACGATA",3,47.28,6.32,-4.51,0.39,1.5,1.11,0.01,">1 nonsynonymous","I2R Y39S G51S K87G K94N",5
"lib2","SARS-CoV-2","CCAGTATTCTCTCAAG",1,18.64,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","D68R E154I K199S",3
"lib2","SARS-CoV-2","CCAGTATTTCATGAGA",7,175.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L60D Y175I",2
"lib2","SARS-CoV-2","CCAGTCAAAAGTCTGA",1,12.17,10.77,-0.06,0.04,2.94,1.08,0,">1 nonsynonymous","E141K T201S",2
"lib2","SARS-CoV-2","CCAGTCAAATTTAACA",7,51.49,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C61S P82T D90R N120S P149W E154Y",6
"lib2","SARS-CoV-2","CCAGTCAAGGACCAAT",3,18.13,10.77,-0.07,0.06,2.96,1.07,0,"1 nonsynonymous","P7A",1
"lib2","SARS-CoV-2","CCAGTCATAGACTACG",13,138.3,6.64,-4.19,0.38,1.5,1.13,0.02,">1 nonsynonymous","I28P P169H",2
"lib2","SARS-CoV-2","CCAGTCATATTATTAA",4,59.89,9.76,-1.07,0.08,2.1,1.09,0,">1 nonsynonymous","A33G S41L D90H I138L",4
"lib2","SARS-CoV-2","CCAGTCATGGACATTC",13,66.6,8,-2.84,0.23,1.5,1.15,0.02,">1 nonsynonymous","L5F N13P A145G",3
"lib2","SARS-CoV-2","CCAGTCCAAAACTAAA",6,67.03,10.26,-0.58,0.04,2.74,1.07,0,">1 nonsynonymous","G9A S139L A192M",3
"lib2","SARS-CoV-2","CCAGTCCGTTCGCAAA",4,127.21,10.89,0.05,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGTCGCCACTGAGT",9,133.39,8.51,-2.33,0.13,2.03,1.06,0.01,">1 nonsynonymous","V37R F167L",2
"lib2","SARS-CoV-2","CCAGTCGCGAATAGGA",6,15.62,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S43R D112P Q144L G152H",4
"lib2","SARS-CoV-2","CCAGTCGCTACATAAT",8,73.03,10.85,0.01,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGTCGGGTCACGAA",3,104.73,10.63,-0.21,0.06,2.89,1.11,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","CCAGTCTAAACTGATA",11,108.3,10.22,-0.61,0.04,2.89,1.1,0,">1 nonsynonymous","C61H K87S",2
"lib2","SARS-CoV-2","CCAGTCTACCGATATT",2,7.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25M I88Y T170M K199A",4
"lib2","SARS-CoV-2","CCAGTCTATACCTAGC",6,61.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9W A22L D75W S113T N118Y T201H",6
"lib2","SARS-CoV-2","CCAGTCTCCTTTTAAC",7,39.34,9.94,-0.9,0.09,2.63,1.04,0,">1 nonsynonymous","C6Y Y91L L122A K128S I138T",5
"lib2","SARS-CoV-2","CCAGTCTTTACACTAT",3,63.58,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39N V103A Y121K",3
"lib2","SARS-CoV-2","CCAGTCTTTTTCTTAT",1,53.06,10.35,-0.48,0.05,2.89,1.04,0,">1 nonsynonymous","A14V A192E",2
"lib2","SARS-CoV-2","CCAGTGAAGGGCCTAG",8,108.93,9.24,-1.6,0.21,1.5,1,0.02,">1 nonsynonymous","G51Q Y66S F185L",3
"lib2","SARS-CoV-2","CCAGTGCACCTATGTC",13,120.06,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G51C L60S Y159G",3
"lib2","SARS-CoV-2","CCAGTGGAACCGTCAT",5,176.27,6,-4.84,1.77,1.5,1.17,0.01,">1 nonsynonymous","N58H K94S F134A Q168R",4
"lib2","SARS-CoV-2","CCAGTGGCCGTATCGT",2,9.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58F A89T V182R",3
"lib2","SARS-CoV-2","CCAGTGTTCCTGTTCC",9,211.23,10.83,-0.01,0.04,2.92,1.1,0,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","CCAGTGTTTATGCCGA",4,96.84,9.24,-1.6,0.08,2.34,1.07,0,">1 nonsynonymous","Y123L P149S T170R",3
"lib2","SARS-CoV-2","CCAGTGTTTGGTACTG",15,32.95,6,-4.84,2,1.5,1.14,0.05,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","CCAGTTAAATAAGAAC",9,125.17,8.77,-2.06,0.07,2.82,1.05,0,">1 nonsynonymous","A14R G174V",2
"lib2","SARS-CoV-2","CCAGTTAGAACTATTT",5,8.35,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","N1R A42L I72Q P82D",4
"lib2","SARS-CoV-2","CCAGTTAGTCCCAGTG",7,0,NA,NA,NA,NA,NA,NA,"stop","C61* L95D L122T",3
"lib2","SARS-CoV-2","CCAGTTATCACGCAGC",4,50.46,9.46,-1.37,0.09,2.6,1.06,0,">1 nonsynonymous","A14T S41L D59S K87V R136L",5
"lib2","SARS-CoV-2","CCAGTTATGCCAGGAT",1,45.29,6,-4.84,1.85,1.5,1.25,0.02,">1 nonsynonymous","Y66H A89M L122T",3
"lib2","SARS-CoV-2","CCAGTTCAACGAGACT",3,18.72,8.51,-2.32,0.14,3,1.11,0.01,">1 nonsynonymous","K87V N107K L111P",3
"lib2","SARS-CoV-2","CCAGTTCATGCAATAG",2,11.62,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","I72H",1
"lib2","SARS-CoV-2","CCAGTTCCCATTCGGC",3,0.52,NA,NA,NA,NA,NA,NA,"stop","L5S C31F F62A Q84Y D90V N109H L122* V153I",8
"lib2","SARS-CoV-2","CCAGTTCGTGCAAAAT",10,146.82,9.69,-1.15,0.03,2.9,1.06,0,">1 nonsynonymous","N64P R73S",2
"lib2","SARS-CoV-2","CCAGTTCTATTCATGG",6,0.83,NA,NA,NA,NA,NA,NA,"stop","G9N K26R T46* L60A D98N V103N",6
"lib2","SARS-CoV-2","CCAGTTCTCTATATGT",2,60.61,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y123P P149V",2
"lib2","SARS-CoV-2","CCAGTTCTTATGGAAG",3,0.89,NA,NA,NA,NA,NA,NA,"stop","I80Y D90R N157*",3
"lib2","SARS-CoV-2","CCAGTTGAGGAACATA",5,52.64,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D112W L125S V173M",3
"lib2","SARS-CoV-2","CCAGTTGCGAATCGAA",3,32.13,8.88,-1.96,0.32,1.5,1,0.04,">1 nonsynonymous","L5P V52H A67T G116L",4
"lib2","SARS-CoV-2","CCAGTTGGGTGCACCT",2,37.17,10.4,-0.44,0.07,2.85,1.07,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","CCAGTTTATGAAAGAT",1,50.79,10.83,-0.01,0.08,2.86,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCAGTTTCAACCCACA",18,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T D90I S129F C158A",4
"lib2","SARS-CoV-2","CCAGTTTCGTAATATG",5,46.59,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T55Y G74C K94R I104V F160I",5
"lib2","SARS-CoV-2","CCAGTTTCTGTAACAA",3,49.36,8.45,-2.39,0.06,2.88,1.07,0,">1 nonsynonymous","K87C I142R",2
"lib2","SARS-CoV-2","CCAGTTTGGATCACCG",2,27.61,9.77,-1.07,0.15,2.44,1.09,0.01,">1 nonsynonymous","C31M K56S",2
"lib2","SARS-CoV-2","CCAGTTTGTAAAAACT",2,51.64,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61S D137A F167Q",3
"lib2","SARS-CoV-2","CCATAAAAAAAAATAT",1,35.47,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","V37T K56L N92W N107R L162V",5
"lib2","SARS-CoV-2","CCATAAAAAAACACAA",2,12.25,10.85,0.01,0.07,3,1,0,"1 nonsynonymous","L188F",1
"lib2","SARS-CoV-2","CCATAAAAAAGCATAT",5,132.07,10.3,-0.54,0.04,2.94,1.03,0,"1 nonsynonymous","Q144I",1
"lib2","SARS-CoV-2","CCATAAAAATAGTTAA",1,90.67,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30L N92Y K128D",3
"lib2","SARS-CoV-2","CCATAAAACTGATCAG",3,32.68,8.28,-2.56,0.15,1.61,1.13,0.01,"1 nonsynonymous","D137G",1
"lib2","SARS-CoV-2","CCATAAAAGGGACACA",5,39.15,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y50L K56L G101A Y121V",4
"lib2","SARS-CoV-2","CCATAAAAGTCCCGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","N1G D90R I104* F160I",4
"lib2","SARS-CoV-2","CCATAAAATATTAACC",3,86.3,8.76,-2.08,0.08,2.58,1.06,0,">1 nonsynonymous","L5T A14N S53H Y119N P133S",5
"lib2","SARS-CoV-2","CCATAAACATCCTGCA",1,24.91,6.43,-4.4,0.55,1.5,1.06,0.03,">1 nonsynonymous","I2Y N110M P149D F167C",4
"lib2","SARS-CoV-2","CCATAAACGGGTACAC",1,11.97,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","D90I Y123M E186Y",3
"lib2","SARS-CoV-2","CCATAAACTAAATGGC",3,15.69,10.88,0.04,0.08,2.95,1.03,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","CCATAAACTATTTGAA",3,30.36,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8Q V52Y I80M L131K",4
"lib2","SARS-CoV-2","CCATAAACTCGACCGT",3,67.86,10.84,0,0.1,2.84,1.1,0,"1 nonsynonymous","T140C",1
"lib2","SARS-CoV-2","CCATAAAGCATAGCAG",2,123.08,10.15,-0.69,0.03,2.91,1.08,0,">1 nonsynonymous","L125Q V153K",2
"lib2","SARS-CoV-2","CCATAAAGCCTGTGCA",8,122.65,10.75,-0.08,0.05,2.86,1.09,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","CCATAAAGCTCTAAGG",2,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124M",1
"lib2","SARS-CoV-2","CCATAAAGTAAAGCAA",8,6.62,NA,NA,NA,NA,NA,NA,"stop","G86* P133E N151*",3
"lib2","SARS-CoV-2","CCATAAAGTACTAAAG",4,91.21,9.94,-0.9,0.03,2.92,1.08,0,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","CCATAAAGTCCGCGAA",3,70.94,9.67,-1.17,0.08,2.02,1.05,0,">1 nonsynonymous","K26A S43P G51M K56S N120E I138V",6
"lib2","SARS-CoV-2","CCATAAATTGCTTTAA",1,9.17,10.38,-0.46,0.11,3,1.04,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","CCATAAATTTAGGACC",1,5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C L57R A81V Y91N G101Q",5
"lib2","SARS-CoV-2","CCATAACAAAGCCCAC",2,16.16,10.74,-0.09,0.05,2.97,1.06,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","CCATAACAATACTATC",4,47.14,8.24,-2.6,0.16,2.41,1.05,0.01,">1 nonsynonymous","L57H G166I",2
"lib2","SARS-CoV-2","CCATAACACAACACGT",12,120.42,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33G T55A R127T I138C Q144A N157Y Q168K",7
"lib2","SARS-CoV-2","CCATAACCAACAACCT",1,13.4,9.37,-1.46,0.14,2.62,1.26,0.01,"1 nonsynonymous","G166C",1
"lib2","SARS-CoV-2","CCATAACCACCCGAAA",5,0.22,NA,NA,NA,NA,NA,NA,"stop","E10* V37M V77M",3
"lib2","SARS-CoV-2","CCATAACGAAGGTAAT",3,7.74,6,-4.84,2,3,1.16,0.01,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","CCATAACGTCCCTCAA",4,0.51,NA,NA,NA,NA,NA,NA,"stop","F99R A105* K199M",3
"lib2","SARS-CoV-2","CCATAACTATCTGTGC",4,38.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17R R124T",2
"lib2","SARS-CoV-2","CCATAAGAATTGTATC",1,0.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","CCATAAGAGTTTGCAC",19,313.53,8.45,-2.39,0.08,1.69,1.11,0,">1 nonsynonymous","P149T P161C",2
"lib2","SARS-CoV-2","CCATAAGATACAAACC",14,133.96,9.42,-1.41,0.03,1.96,1.06,0,"1 nonsynonymous","F12K",1
"lib2","SARS-CoV-2","CCATAAGGAACCCCCA",6,31.57,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","Y21S N64K V71L I88F F134I E154L G172V Y178C",8
"lib2","SARS-CoV-2","CCATAAGGAAGGTTCC",2,41.46,10.86,0.03,0.04,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","CCATAAGGACCAAAAA",1,7.58,10.84,0.01,0.18,2.81,1,0.01,"1 nonsynonymous","R16N",1
"lib2","SARS-CoV-2","CCATAAGGGCACTTTT",2,85.72,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","W23A R73P Y175R L188S",4
"lib2","SARS-CoV-2","CCATAAGGTTCACGGA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","CCATAAGTCGACAGCC",1,24.28,10.92,0.09,0.08,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATAAGTGAAAGAGG",14,142.26,10.33,-0.51,0.04,2.68,1.04,0,">1 nonsynonymous","S29W Y39I T85I S164H",4
"lib2","SARS-CoV-2","CCATAATAATATGATC",1,39.06,6.11,-4.72,1.05,1.5,1.16,0.03,">1 nonsynonymous","N30K V65Q T100S S108L",4
"lib2","SARS-CoV-2","CCATAATAGAACAGTA",10,121.55,6.05,-4.78,0.89,1.5,1.19,0.02,">1 nonsynonymous","N30G F62S A89S N107V",4
"lib2","SARS-CoV-2","CCATAATCTACACCAG",14,65.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25G P82Q P96N T201L",4
"lib2","SARS-CoV-2","CCATAATCTAGAAATC",1,0.4,NA,NA,NA,NA,NA,NA,"stop","S41R P54* R78Y K87E R124F F160D L187H",7
"lib2","SARS-CoV-2","CCATAATGAAAACAAC",2,16.95,9.23,-1.61,0.26,1.74,1.2,0.03,">1 nonsynonymous","C61I Y91T T100I P197S",4
"lib2","SARS-CoV-2","CCATAATGGAGTCTGG",6,6.8,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G9F K94E S129Y F167I",4
"lib2","SARS-CoV-2","CCATAATGTGCTATTG",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143E Q176T",2
"lib2","SARS-CoV-2","CCATAATTCTTAACAC",12,206.32,10.4,-0.43,0.05,2.97,1.05,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CCATAATTGAAAAGTT",1,58.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N1P F62N N157Y Q168K G174Q",5
"lib2","SARS-CoV-2","CCATAATTTAAGAGCA",7,72.25,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C6K G51R G86M N107R",4
"lib2","SARS-CoV-2","CCATACAAAAAAAACG",11,118.88,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","N4C N107Q K128P G146I G155L T170A",6
"lib2","SARS-CoV-2","CCATACAAAATGGCCA",2,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G D68P Y93A F99V",4
"lib2","SARS-CoV-2","CCATACACAACCCAGA",3,36.61,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","G101K L122G R136F N151C",4
"lib2","SARS-CoV-2","CCATACACGACATTCT",10,5.88,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","P149Q P161T",2
"lib2","SARS-CoV-2","CCATACACTATCTTGA",4,24.97,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F12S F99R P149S",3
"lib2","SARS-CoV-2","CCATACAGCCATTCAT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","D34L S41Y A81F D97*",4
"lib2","SARS-CoV-2","CCATACAGTAGTCTTT",13,0.61,NA,NA,NA,NA,NA,NA,"stop","A18T C61* W106P T148N T201V",5
"lib2","SARS-CoV-2","CCATACATGGCATATT",2,11.13,10.81,-0.02,0.09,2.81,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCATACATGTTCTCGA",3,12.57,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","I104P",1
"lib2","SARS-CoV-2","CCATACATTATACATC",2,40.42,10.31,-0.53,0.04,2.91,1.05,0,">1 nonsynonymous","A81R K132T",2
"lib2","SARS-CoV-2","CCATACATTGGTACTT",1,75.13,10.37,-0.47,0.07,2.83,1.06,0,">1 nonsynonymous","S45H N64F F160C",3
"lib2","SARS-CoV-2","CCATACCAGTACTAAT",6,84.42,10.83,0,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATACCCTTGATCTA",3,1.88,NA,NA,NA,NA,NA,NA,"stop","N1* Q144S P149T Q163R",4
"lib2","SARS-CoV-2","CCATACCTCATAGGCT",1,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L Q84L G86V D98T N107H Q163S",6
"lib2","SARS-CoV-2","CCATACGAGGAGGAAT",10,129.37,10.93,0.1,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATACGATACTACAA",15,196.98,10.93,0.09,0.04,2.95,1.06,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","CCATACGCGAATAGGA",4,5.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D97Y V103M L162Y T170F",4
"lib2","SARS-CoV-2","CCATACGGCTTCTGGT",6,51.83,6,-4.84,2,3,1.17,0,">1 nonsynonymous","E10G I88W A105P N120Y",4
"lib2","SARS-CoV-2","CCATACTAAGTTAACA",6,4.34,NA,NA,NA,NA,NA,NA,"stop","V32* N92K P133L T201S",4
"lib2","SARS-CoV-2","CCATACTAGACAATTT",1,16.35,9.88,-0.95,0.13,2.49,1.11,0.01,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","CCATACTATAGTAAAA",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106S P177T A190R",3
"lib2","SARS-CoV-2","CCATACTCGAACATCC",5,44.34,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G74F G86H N118K K132M",4
"lib2","SARS-CoV-2","CCATACTGAATGGATC",5,22.7,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","L5R L60V F99R A105V F134A V173R T201D",7
"lib2","SARS-CoV-2","CCATACTTACGTCTAA",9,88.27,10.68,-0.15,0.02,2.94,1.04,0,">1 nonsynonymous","K48A D97L S129K",3
"lib2","SARS-CoV-2","CCATACTTGAACCCTA",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M T63P V77Q P96A F156S",5
"lib2","SARS-CoV-2","CCATACTTGCTAACTC",2,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S N107L C150S",3
"lib2","SARS-CoV-2","CCATAGAAAAGTAGTC",9,5.81,NA,NA,NA,NA,NA,NA,"stop","Y143* Q163L",2
"lib2","SARS-CoV-2","CCATAGAAACGTTCTA",10,33.91,9.15,-1.69,0.15,1.57,1.16,0.01,">1 nonsynonymous","T15V D98P Y123V",3
"lib2","SARS-CoV-2","CCATAGAAATAAGGTA",4,68.34,10.81,-0.03,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATAGAATCTAAAAA",4,68.95,6.65,-4.19,0.36,1.5,1.12,0.02,">1 nonsynonymous","N64R S113K G174R",3
"lib2","SARS-CoV-2","CCATAGACAATACCTA",7,75.19,8.77,-2.07,0.09,2.66,1.07,0,">1 nonsynonymous","C61H D97S Y119I K132T S200T",5
"lib2","SARS-CoV-2","CCATAGACCAAGACGG",6,152.8,10.86,0.03,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATAGACTAAGACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S I88R",2
"lib2","SARS-CoV-2","CCATAGAGTCTCAGGT",12,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82H F99E",2
"lib2","SARS-CoV-2","CCATAGCAAAAATACG",3,48.78,6,-4.84,1.49,1.5,1.12,0.01,">1 nonsynonymous","T3I Y39Q N92Q P133L L183M",5
"lib2","SARS-CoV-2","CCATAGCAGCACTTAT",3,1.27,NA,NA,NA,NA,NA,NA,"stop","N40F T63R V173*",3
"lib2","SARS-CoV-2","CCATAGCCCCGCGGAC",5,80.86,7.12,-3.72,0.26,1.5,1.05,0.02,">1 nonsynonymous","E76K N120T",2
"lib2","SARS-CoV-2","CCATAGCCGTTTGCAG",12,131.61,10.78,-0.06,0.03,2.93,1.06,0,">1 nonsynonymous","Y123R Q163L",2
"lib2","SARS-CoV-2","CCATAGCTCACCAATG",4,54.97,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y39Q K48P Y119S D137L",4
"lib2","SARS-CoV-2","CCATAGGAACTCAGAG",3,17.25,9.49,-1.35,0.17,2.08,1.02,0.01,">1 nonsynonymous","I2S P54T Y91N G116L",4
"lib2","SARS-CoV-2","CCATAGGACCCACTCT",5,0.12,NA,NA,NA,NA,NA,NA,"stop","S41V D112*",2
"lib2","SARS-CoV-2","CCATAGTATCATACGT",3,0.69,NA,NA,NA,NA,NA,NA,"stop","L5I N24S Y35Q P133*",4
"lib2","SARS-CoV-2","CCATAGTATCGCATTA",6,0,NA,NA,NA,NA,NA,NA,"stop","P96L W106Q K128L P149Q C195*",5
"lib2","SARS-CoV-2","CCATAGTATCTCTGAC",4,90.65,9.65,-1.19,0.06,2.71,1.08,0,">1 nonsynonymous","N4Y F44Y K87V S139I",4
"lib2","SARS-CoV-2","CCATAGTCATATGGAA",4,0.16,NA,NA,NA,NA,NA,NA,"stop","N30A G117Y Q144C E186*",4
"lib2","SARS-CoV-2","CCATAGTCCCCTGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85Q K94*",2
"lib2","SARS-CoV-2","CCATATAAACAATAAA",8,131.52,10.33,-0.51,0.04,2.88,1.05,0,">1 nonsynonymous","V37N F62P K132T N151M",4
"lib2","SARS-CoV-2","CCATATAACCTGGATC",4,16.78,7.55,-3.29,0.27,1.5,1.12,0.03,">1 nonsynonymous","Y93I Y123M",2
"lib2","SARS-CoV-2","CCATATAAGGCGCCGA",16,59.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L162E R179G",2
"lib2","SARS-CoV-2","CCATATACACTGCATA",3,104.32,7.75,-3.09,0.14,1.87,1.1,0.01,">1 nonsynonymous","G166T Q176S T201V",3
"lib2","SARS-CoV-2","CCATATACAGGCATCT",12,61.5,8.59,-2.25,0.22,1.5,1.07,0.02,">1 nonsynonymous","I88Q K132L",2
"lib2","SARS-CoV-2","CCATATAGGTGTCTAA",7,52.53,10.85,0.01,0.06,2.92,1.1,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","CCATATATATTATCCG",2,20.52,10.6,-0.24,0.12,2.7,1.32,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCATATATCGTGACAA",6,135.56,10.53,-0.3,0.05,2.88,1.05,0,">1 nonsynonymous","N40I T140S P197L",3
"lib2","SARS-CoV-2","CCATATATGCATTTTG",2,37.95,10.1,-0.74,0.17,1.79,1.06,0.01,">1 nonsynonymous","R16T P82R",2
"lib2","SARS-CoV-2","CCATATATTAGGGCCG",2,0.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7Y",1
"lib2","SARS-CoV-2","CCATATCAGAGGAGCA",7,63.23,10.39,-0.45,0.05,2.94,1,0,">1 nonsynonymous","A14T N58Q",2
"lib2","SARS-CoV-2","CCATATCCGACTGACA",2,29.06,6.1,-4.74,0.44,2.15,1.09,0,">1 nonsynonymous","L95G Y119C S147A F167C K198F",5
"lib2","SARS-CoV-2","CCATATCCGAGCTTGG",1,9.81,10.84,0.01,0.06,3,1.03,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","CCATATCGATTTACTT",10,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M T85K G86N T100F V103F T170Y",6
"lib2","SARS-CoV-2","CCATATCGCATAGAAA",13,130.63,8.41,-2.43,0.11,2.75,1.07,0,">1 nonsynonymous","Y121K T170E",2
"lib2","SARS-CoV-2","CCATATCGTTATGCAT",6,74.58,6,-4.84,1.49,1.5,1.17,0.01,">1 nonsynonymous","V20R Y50S S69E Q84F",4
"lib2","SARS-CoV-2","CCATATCTAAAAGGAT",2,33.56,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C31H C102G R136A",3
"lib2","SARS-CoV-2","CCATATCTCACAAGTG",4,69.91,10.74,-0.1,0.05,2.98,1.03,0,">1 nonsynonymous","S41Y P197S",2
"lib2","SARS-CoV-2","CCATATGCCATGAACT",7,65.97,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","S19R F44N I72K K87V",4
"lib2","SARS-CoV-2","CCATATGGAATATAAA",17,263.49,10.57,-0.26,0.04,2.94,1.04,0,"1 nonsynonymous","T100E",1
"lib2","SARS-CoV-2","CCATATGGACTGCCTA",2,55.67,9.34,-1.49,0.07,2.52,1.06,0,">1 nonsynonymous","S41V Q144C",2
"lib2","SARS-CoV-2","CCATATGGTTAATGTA",8,54.78,9.52,-1.32,0.07,2.8,1.19,0,">1 nonsynonymous","S41Y C61D P149Q F156K",4
"lib2","SARS-CoV-2","CCATATTAACGCCCTG",2,13.16,6,-4.84,2,3,1.06,0,"1 nonsynonymous","V182W",1
"lib2","SARS-CoV-2","CCATATTAATACAAGG",4,9.03,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C6G N40Y C49S C61D",4
"lib2","SARS-CoV-2","CCATATTAATCAGACT",1,5.84,7.59,-3.25,0.34,1.83,1.12,0.04,">1 nonsynonymous","F12P S129Y",2
"lib2","SARS-CoV-2","CCATATTACACCGATG",6,2.43,NA,NA,NA,NA,NA,NA,"stop","A33* D90L",2
"lib2","SARS-CoV-2","CCATATTAGATTCAAA",4,175.79,10.85,0.01,0.06,2.93,1.08,0,"1 nonsynonymous","T201H",1
"lib2","SARS-CoV-2","CCATATTATACTGGAA",4,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50W F62D E135M S200Y",4
"lib2","SARS-CoV-2","CCATATTGAAAAGTAA",6,136.77,10.59,-0.25,0.04,2.87,1.07,0,">1 nonsynonymous","N64P N151S",2
"lib2","SARS-CoV-2","CCATATTGAATAGACA",2,10.82,10.05,-0.79,0.18,2.46,1,0.01,">1 nonsynonymous","A33E A42S N58V K199M",4
"lib2","SARS-CoV-2","CCATATTGCACATCAA",1,68.07,10.08,-0.75,0.08,2.66,1.06,0,">1 nonsynonymous","T3G D90Y K128A",3
"lib2","SARS-CoV-2","CCATATTGTGCATTAA",1,31.88,8.21,-2.63,0.14,1.9,1.07,0.01,">1 nonsynonymous","F8N I142T",2
"lib2","SARS-CoV-2","CCATATTTCCTTATTG",2,21.29,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","P7R D68Q Y91R N110S T201I",5
"lib2","SARS-CoV-2","CCATCAAAAATTTAGG",6,57.23,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y91I Y119W E135A T170Y",4
"lib2","SARS-CoV-2","CCATCAAAACACGTCT",4,31.67,6,-4.84,2,1.5,1.39,0.04,">1 nonsynonymous","I80W Y119F",2
"lib2","SARS-CoV-2","CCATCAAAACTCAAGC",6,75.42,10.24,-0.6,0.03,2.94,1.08,0,">1 nonsynonymous","L5E G83L Y123R I138L",4
"lib2","SARS-CoV-2","CCATCAAAATCTATCA",6,102.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A33P Y119K G146P",3
"lib2","SARS-CoV-2","CCATCAAAATGAGCAA",1,9.45,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C49V N64P R124M",3
"lib2","SARS-CoV-2","CCATCAAACGCTTACG",2,9.27,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","N4H D90K I104N",3
"lib2","SARS-CoV-2","CCATCAAACTGTACAG",3,94.99,9.39,-1.45,0.05,2.97,1.07,0,">1 nonsynonymous","R78S L125P E141S S200K",4
"lib2","SARS-CoV-2","CCATCAAAGTGAAACG",9,71.21,9.52,-1.31,0.12,1.77,1.09,0.01,">1 nonsynonymous","F8L F17M A81T",3
"lib2","SARS-CoV-2","CCATCAAATTTAGCAG",2,16.73,6,-4.84,1.64,1.5,1.09,0.04,">1 nonsynonymous","G51C P82Q L131H",3
"lib2","SARS-CoV-2","CCATCAACCTAGCTGG",6,55.96,9.93,-0.91,0.08,2.79,1.16,0,">1 nonsynonymous","N4R A33Y K87G",3
"lib2","SARS-CoV-2","CCATCAACTAGTCTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","CCATCAAGGAAAATTG",6,49.91,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L57S G86E S164T K199S",4
"lib2","SARS-CoV-2","CCATCAAGGGCCAAGC",4,40.02,8.84,-2,0.1,2.65,1.07,0,">1 nonsynonymous","C6W A145E",2
"lib2","SARS-CoV-2","CCATCAAGTCCACAAA",9,14.26,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95N N120Q G146Y Q168R",4
"lib2","SARS-CoV-2","CCATCAAGTGCCGGCA",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S Y119T",2
"lib2","SARS-CoV-2","CCATCAATAAATAGGC",10,1.11,NA,NA,NA,NA,NA,NA,"stop","N120V P149* N157I",3
"lib2","SARS-CoV-2","CCATCAATCTCACAAT",1,49.85,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F47C P177V",2
"lib2","SARS-CoV-2","CCATCAATTCCAATGC",8,36.95,6,-4.84,1.2,3,1.19,0.01,">1 nonsynonymous","F8L G83S I88K P96I P133Y",5
"lib2","SARS-CoV-2","CCATCACACCCTCCAT",2,97.04,6,-4.84,2,3,1.21,0,">1 nonsynonymous","Y35H K56S Q176C",3
"lib2","SARS-CoV-2","CCATCACGCAGAAGCA",10,121.22,6.07,-4.77,1.21,1.5,1.21,0.03,">1 nonsynonymous","R27G V115R K128V P133N",4
"lib2","SARS-CoV-2","CCATCACGGTATTGTT",6,30.19,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W23S I88W P149S",3
"lib2","SARS-CoV-2","CCATCACTACGGACCT",3,0.2,NA,NA,NA,NA,NA,NA,"stop","C6V G101*",2
"lib2","SARS-CoV-2","CCATCACTCTTAGATG",1,25.54,10.65,-0.19,0.05,2.99,1.01,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","CCATCAGAACACGTCC",10,43.3,7.92,-2.91,0.16,1.5,1.07,0.01,">1 nonsynonymous","F17T K128L P149H",3
"lib2","SARS-CoV-2","CCATCAGCCCACGATA",3,25.96,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C61G A89Y S113I Y175L",4
"lib2","SARS-CoV-2","CCATCAGCTGGGTCAA",15,38.31,6,-4.84,1.1,1.5,1.18,0.01,">1 nonsynonymous","D59E G86M V103R D137Q P169M",5
"lib2","SARS-CoV-2","CCATCAGGCTGATAAC",10,90.68,8.56,-2.28,0.18,1.5,1.08,0.01,">1 nonsynonymous","A18E C61T D68T",3
"lib2","SARS-CoV-2","CCATCAGTGGGCTTTC",5,47.02,6.12,-4.71,0.55,2.05,1.21,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","CCATCATAAGGATGGG",2,37.88,10.83,-0.01,0.07,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATCATACGCACAAG",1,16.41,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","F167G",1
"lib2","SARS-CoV-2","CCATCATATTTTCTGA",6,67.17,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","N40G T85M Y91L G101P K128I",5
"lib2","SARS-CoV-2","CCATCATTATACAGAC",1,33.2,10.81,-0.02,0.06,2.93,1.06,0,">1 nonsynonymous","V115R T193Y V194G",3
"lib2","SARS-CoV-2","CCATCCAATTTATGCA",4,29.14,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D97I N171P V181C",3
"lib2","SARS-CoV-2","CCATCCACTGAGAAGG",1,30.73,9.87,-0.96,0.1,2.5,1.01,0,">1 nonsynonymous","T3S F8P",2
"lib2","SARS-CoV-2","CCATCCAGGGATTCCT",1,8.34,7.71,-3.12,0.4,1.5,1.02,0.04,">1 nonsynonymous","A81Q A105L",2
"lib2","SARS-CoV-2","CCATCCAGTAAAATGC",14,153.97,10.53,-0.3,0.04,2.97,1.05,0,">1 nonsynonymous","G9L N24S V153I",3
"lib2","SARS-CoV-2","CCATCCCCCACCGTCC",20,384.21,9.94,-0.9,0.03,2.93,1.01,0,"1 nonsynonymous","Q176H",1
"lib2","SARS-CoV-2","CCATCCCCTCCGACTT",6,41.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13I Y143E T201C",3
"lib2","SARS-CoV-2","CCATCCCGGCAGCACA",7,0.11,NA,NA,NA,NA,NA,NA,"stop","N107G D112*",2
"lib2","SARS-CoV-2","CCATCCCGGTTCCAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V D137G T201S",3
"lib2","SARS-CoV-2","CCATCCGACACTAATC",13,141.49,10.18,-0.65,0.09,2.35,1.01,0,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","CCATCCGACGCGCTAT",4,20.36,6,-4.84,2,1.5,1.05,0,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","CCATCCGATAAACTGC",13,283.9,10.11,-0.73,0.04,2.71,1.06,0,">1 nonsynonymous","N4R Q79A",2
"lib2","SARS-CoV-2","CCATCCGTCGTAGATT",14,307.91,10.36,-0.48,0.03,2.95,1.06,0,">1 nonsynonymous","P149L F156V",2
"lib2","SARS-CoV-2","CCATCCTAAATTAACG",6,12.74,8.78,-2.06,0.43,1.5,1,0.07,">1 nonsynonymous","F47P E135A",2
"lib2","SARS-CoV-2","CCATCCTAAGACTAGT",5,0,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","CCATCCTACTAAACAA",1,8.62,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","P82S F167K",2
"lib2","SARS-CoV-2","CCATCCTACTGAACCA",12,8.57,NA,NA,NA,NA,NA,NA,"stop","N4D V32P I80L A89C F99* R136H",6
"lib2","SARS-CoV-2","CCATCCTATAATAAGT",2,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94L V103N C158T V180P",4
"lib2","SARS-CoV-2","CCATCCTTCCCATAGG",3,62.65,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S113L N157Y",2
"lib2","SARS-CoV-2","CCATCCTTTCCACATG",5,62.56,10.7,-0.13,0.03,2.92,1.09,0,">1 nonsynonymous","T193V T201S",2
"lib2","SARS-CoV-2","CCATCGAAACAATCAC",3,136.84,8.86,-1.97,0.09,2.64,1.09,0,">1 nonsynonymous","A145N T201C",2
"lib2","SARS-CoV-2","CCATCGAAACTACCTA",3,11.11,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S19R F99I N130V",3
"lib2","SARS-CoV-2","CCATCGAAGCAACAAA",4,13.76,10.86,0.02,0.07,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATCGACATGGTACT",3,6.04,7.85,-2.99,0.42,1.5,1,0.03,">1 nonsynonymous","D34N D112Y",2
"lib2","SARS-CoV-2","CCATCGACGGTGTTAT",3,53.09,10.35,-0.49,0.04,2.92,1.01,0,"1 nonsynonymous","Q84Y",1
"lib2","SARS-CoV-2","CCATCGAGAAAATCCC",10,251.28,9.42,-1.42,0.06,2.71,1.07,0,">1 nonsynonymous","S41Q D112E",2
"lib2","SARS-CoV-2","CCATCGATATAACCGA",3,33.13,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36A I72M Y91F V103C L131Q C158R",6
"lib2","SARS-CoV-2","CCATCGATTACGGAGC",1,10.69,10.72,-0.12,0.13,2.79,1.17,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","CCATCGCGCCTAGAAG",3,6.93,7.04,-3.8,0.24,1.99,1.12,0.02,">1 nonsynonymous","F99R S139T",2
"lib2","SARS-CoV-2","CCATCGTATTAAAGAG",10,87.67,10.89,0.05,0.04,2.91,1.09,0,">1 nonsynonymous","I28L T100F",2
"lib2","SARS-CoV-2","CCATCTAAACTAAATT",2,12.75,8.57,-2.26,0.12,2.97,1,0.01,">1 nonsynonymous","G83S G146V P197K",3
"lib2","SARS-CoV-2","CCATCTAACAATTCAC",3,87.72,10.31,-0.52,0.03,2.88,1.05,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","CCATCTAACATAAAAT",3,27.48,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L60P L131N R179S",3
"lib2","SARS-CoV-2","CCATCTAACTACGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44* G86Q K114G S184I",4
"lib2","SARS-CoV-2","CCATCTAATAGCACAA",8,116.41,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F47S N157K",2
"lib2","SARS-CoV-2","CCATCTAATATTGTAC",1,2.05,NA,NA,NA,NA,NA,NA,"stop","F160*",1
"lib2","SARS-CoV-2","CCATCTAATTATAATT",7,38.43,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V37S F44S A89L I104H E135Y T201N",6
"lib2","SARS-CoV-2","CCATCTAGCCCAGGAA",8,12.05,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","A42F G51F C150V",3
"lib2","SARS-CoV-2","CCATCTATAAACTGAC",9,117.1,9.33,-1.5,0.06,2.57,1.09,0,">1 nonsynonymous","R27F S43T Q84G S164I A192T",5
"lib2","SARS-CoV-2","CCATCTCACCAATGAC",9,111.99,10.14,-0.69,0.04,2.73,1.11,0,">1 nonsynonymous","Y66C I138R",2
"lib2","SARS-CoV-2","CCATCTCCAAACAACG",6,42.67,6.81,-4.03,0.4,1.5,1.14,0.02,">1 nonsynonymous","I80M F126R T148S",3
"lib2","SARS-CoV-2","CCATCTCCATCTACAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","T63F R127* S129I T201M",4
"lib2","SARS-CoV-2","CCATCTCCCACCTCTC",4,84.53,9.8,-1.04,0.07,2.17,1.06,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","CCATCTCGAGAACACC",18,9.54,9.78,-1.05,0.24,2.06,1.2,0.03,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","CCATCTCTCGACTTTA",2,37.18,8.87,-1.97,0.39,1.5,1,0.07,">1 nonsynonymous","A33P T46A Y50I L60V F160K",5
"lib2","SARS-CoV-2","CCATCTGAAGTCAGAG",12,133.66,7.05,-3.79,0.25,1.5,1.14,0.01,">1 nonsynonymous","S43Q D112P",2
"lib2","SARS-CoV-2","CCATCTGAGCAACAAT",2,18.07,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A89Q N157Y",2
"lib2","SARS-CoV-2","CCATCTGCCCTTTAAT",6,213.49,8.15,-2.68,0.11,2.22,1.06,0,">1 nonsynonymous","V77L Q176G",2
"lib2","SARS-CoV-2","CCATCTGGTCACACGG",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C F44G D97N V103L",4
"lib2","SARS-CoV-2","CCATCTGTCACTATTT",4,16.77,7.28,-3.55,0.58,1.5,1.17,0.04,">1 nonsynonymous","A33M G155W Q163S F167C",4
"lib2","SARS-CoV-2","CCATCTGTCTCACAGA",7,27.82,6.08,-4.76,0.8,1.5,1.15,0.01,">1 nonsynonymous","S41R A89H S139P F167S",4
"lib2","SARS-CoV-2","CCATCTTAACTGATAT",19,289.81,10.75,-0.09,0.04,2.92,1.09,0,">1 nonsynonymous","V32Q I104F I138K",3
"lib2","SARS-CoV-2","CCATCTTAGACATTTT",1,71.48,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","T140N P177T",2
"lib2","SARS-CoV-2","CCATCTTAGCTCCCTT",4,120.08,10.73,-0.11,0.03,2.93,1.04,0,">1 nonsynonymous","T46S G83R",2
"lib2","SARS-CoV-2","CCATCTTCTTGCTCTA",7,6.25,NA,NA,NA,NA,NA,NA,"stop","L5T L95M P149W F167*",4
"lib2","SARS-CoV-2","CCATCTTGATCGCCAT",15,167.55,9.62,-1.22,0.04,2.91,1.06,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","CCATCTTGGCATTGCA",2,61.89,10.47,-0.37,0.04,3,1,0,"1 nonsynonymous","Y66D",1
"lib2","SARS-CoV-2","CCATCTTGTAATAGAC",7,63.35,6.6,-4.24,0.48,1.5,1.18,0.02,">1 nonsynonymous","F8R G174Y",2
"lib2","SARS-CoV-2","CCATGAAACACTTACA",1,3.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157D",1
"lib2","SARS-CoV-2","CCATGAAAGGAACATT",6,96.87,9.95,-0.88,0.07,2.68,1.08,0,">1 nonsynonymous","K56C R127K T201L",3
"lib2","SARS-CoV-2","CCATGAACATTTTTAG",9,143.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12H S41R P54S L111N L125C",5
"lib2","SARS-CoV-2","CCATGAACCTACAATG",4,75.55,10.09,-0.75,0.05,2.82,1.02,0,">1 nonsynonymous","Y35C L187C",2
"lib2","SARS-CoV-2","CCATGAACTCGATCTG",2,24.15,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L95N V115D Y159P",3
"lib2","SARS-CoV-2","CCATGAAGGACCATAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","CCATGAATAATCTAAC",4,52.18,6.03,-4.8,1.18,1.5,1.23,0.03,">1 nonsynonymous","S45Q Y165P",2
"lib2","SARS-CoV-2","CCATGAATATGAATTA",13,1.09,NA,NA,NA,NA,NA,NA,"stop","V32P I80* Y91L F156S",4
"lib2","SARS-CoV-2","CCATGAATTTACAGAA",1,2.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68K",1
"lib2","SARS-CoV-2","CCATGAATTTGCCGGA",2,19.3,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F44I C158S G174R",3
"lib2","SARS-CoV-2","CCATGACAAGGGGTGG",12,2.39,NA,NA,NA,NA,NA,NA,"stop","G9* T85S L95S S200Y",4
"lib2","SARS-CoV-2","CCATGACACACGAATA",4,32.03,10.2,-0.63,0.05,2.95,1.03,0,">1 nonsynonymous","T100W G152T",2
"lib2","SARS-CoV-2","CCATGACACTTAAACA",3,11.91,9.16,-1.67,0.26,1.76,1,0.02,">1 nonsynonymous","T85Y Y178L H189I",3
"lib2","SARS-CoV-2","CCATGACATAATGTAA",6,10.91,6,-4.84,2,1.5,1.13,0.08,">1 nonsynonymous","E10P C49M F99K",3
"lib2","SARS-CoV-2","CCATGACATCATACAC",19,82.88,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L60T F99R",2
"lib2","SARS-CoV-2","CCATGACGCCACATTT",2,26.03,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","K26W Q163R G172S",3
"lib2","SARS-CoV-2","CCATGACGCCTTGCCT",2,1.08,NA,NA,NA,NA,NA,NA,"stop","S43* Q144L",2
"lib2","SARS-CoV-2","CCATGACTGTGATCCT",1,1.86,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCATGACTGTGTTCGA",4,27.89,10.49,-0.34,0.09,2.91,1.04,0,"1 nonsynonymous","V65T",1
"lib2","SARS-CoV-2","CCATGAGCATTACAAT",10,160.42,10.49,-0.34,0.04,2.91,1.04,0,">1 nonsynonymous","E10V T55S",2
"lib2","SARS-CoV-2","CCATGAGCTCATACCT",4,18.06,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9F W23F Y35I T63Y I80K N92R W106S",7
"lib2","SARS-CoV-2","CCATGAGGGTGCATTA",1,5.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L L95N F156M S200H",4
"lib2","SARS-CoV-2","CCATGATAAAACCCAT",4,1.42,NA,NA,NA,NA,NA,NA,"stop","R27Q F44* T85H N151I L188F T201F",6
"lib2","SARS-CoV-2","CCATGATAATTTCCGA",3,13.04,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T63Y Y91K V103T",3
"lib2","SARS-CoV-2","CCATGATAGAAATAAG",4,13.77,9.45,-1.39,0.19,1.83,1.12,0.02,"1 nonsynonymous","P82S",1
"lib2","SARS-CoV-2","CCATGATCACAAGACT",5,45.61,10.5,-0.34,0.07,2.89,1.12,0,">1 nonsynonymous","T63W S147D",2
"lib2","SARS-CoV-2","CCATGATGACAAATCC",2,7.49,6,-4.84,2,1.5,1.04,0.03,">1 nonsynonymous","D75V L111P K132S S139A P197R",5
"lib2","SARS-CoV-2","CCATGATTCGACCATT",1,1.36,NA,NA,NA,NA,NA,NA,"stop","I138Y Q176* F185S",3
"lib2","SARS-CoV-2","CCATGCAAGTGTGTTA",13,181.12,10.42,-0.42,0.03,2.87,1.07,0,">1 nonsynonymous","L5K A42R K87Y E135C",4
"lib2","SARS-CoV-2","CCATGCAATTAGATCA",9,43.71,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T3F G9C R124H G152D",4
"lib2","SARS-CoV-2","CCATGCAGCCCTTTCT",4,10.48,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D98H K114S R127N T148L T201R",5
"lib2","SARS-CoV-2","CCATGCCAGGTGTACC",2,0.07,NA,NA,NA,NA,NA,NA,"stop","N107K F156*",2
"lib2","SARS-CoV-2","CCATGCCCAAACCAAT",7,99.7,9.06,-1.78,0.08,1.89,1.1,0,">1 nonsynonymous","G86D K114R",2
"lib2","SARS-CoV-2","CCATGCCCCTATTAAG",3,18.1,6,-4.84,2,1.5,1.09,0.02,"1 nonsynonymous","Y50P",1
"lib2","SARS-CoV-2","CCATGCCTGTTATGGC",8,215.03,10.63,-0.2,0.03,2.92,1.05,0,"1 nonsynonymous","V182I",1
"lib2","SARS-CoV-2","CCATGCTCCCGCTTTT",6,102.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V32A N40V C61H Y121I I138G G174Q",6
"lib2","SARS-CoV-2","CCATGCTGAGGCCATT",12,92.06,6,-4.84,1.01,3,1.12,0,">1 nonsynonymous","F134L P161S T170L",3
"lib2","SARS-CoV-2","CCATGCTTGTATCAAA",10,13.94,7.89,-2.94,0.33,1.5,1,0.04,">1 nonsynonymous","T3D S184P",2
"lib2","SARS-CoV-2","CCATGGAAGTATGATA",12,56.78,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C49A N107A",2
"lib2","SARS-CoV-2","CCATGGAATTGAACCG",2,102.5,10.73,-0.1,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATGGACAGTATAAT",5,32.77,7.39,-3.45,0.15,1.5,1.02,0.01,"1 nonsynonymous","R127F",1
"lib2","SARS-CoV-2","CCATGGACATAAGCAT",2,50.85,10.63,-0.21,0.05,2.91,1.11,0,">1 nonsynonymous","K87Y K198L",2
"lib2","SARS-CoV-2","CCATGGACCACAAGGA",1,8.69,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","K87F E154I G172I",3
"lib2","SARS-CoV-2","CCATGGACTATATCAG",8,27.17,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","R27V C49F T55I Y123K L162C",5
"lib2","SARS-CoV-2","CCATGGCATCAGGCCA",6,2.47,NA,NA,NA,NA,NA,NA,"stop","A105* T201C",2
"lib2","SARS-CoV-2","CCATGGCCCCCTAAAT",1,5.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R S41T T100Q Y119R P133G F160T",6
"lib2","SARS-CoV-2","CCATGGGACCTAGTTT",2,55,9.67,-1.17,0.06,2.52,1.02,0,">1 nonsynonymous","A14I G83C S147Y",3
"lib2","SARS-CoV-2","CCATGGGGCATCCGAT",5,49.96,9.64,-1.2,0.13,1.93,1.02,0.01,">1 nonsynonymous","W106V N120A P149L Q168W T201N",5
"lib2","SARS-CoV-2","CCATGGTATTAAGACA",5,143.99,10.84,0,0.04,2.93,1.08,0,">1 nonsynonymous","T55G T148K",2
"lib2","SARS-CoV-2","CCATGGTGTAACATCT",6,21.97,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S19G G86V Q168M",3
"lib2","SARS-CoV-2","CCATGTAAGCCGCATT",6,66.31,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","T3L G155C R179I",3
"lib2","SARS-CoV-2","CCATGTACCGGGAGAT",5,105.15,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y35V D90I G146C",3
"lib2","SARS-CoV-2","CCATGTGATCAGGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28V D59V",2
"lib2","SARS-CoV-2","CCATGTTGATGTACAT",3,43.14,10.69,-0.14,0.05,2.97,1.06,0,">1 nonsynonymous","N120L L187S",2
"lib2","SARS-CoV-2","CCATTAAACATGAGAA",2,0.83,NA,NA,NA,NA,NA,NA,"stop","T3C R16* Y175S",3
"lib2","SARS-CoV-2","CCATTAAACTATAAAT",3,30.02,6.12,-4.71,0.97,1.5,1.12,0.02,">1 nonsynonymous","L5S N58P F99E Y119S",4
"lib2","SARS-CoV-2","CCATTAACACGGGCTT",3,49.4,10.9,0.07,0.03,2.92,1.09,0,">1 nonsynonymous","F62I Y123K",2
"lib2","SARS-CoV-2","CCATTAACGCCTAATA",3,59.38,10.74,-0.1,0.03,2.97,1.07,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","CCATTAACTACGCCGC",3,22.85,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N1R A89Y N157W",3
"lib2","SARS-CoV-2","CCATTAAGAAATTAAT",6,71.33,9.93,-0.9,0.04,2.89,1.06,0,">1 nonsynonymous","Q176H A192L",2
"lib2","SARS-CoV-2","CCATTAAGACGTTACG",14,312.45,9.99,-0.84,0.03,2.96,1.04,0,">1 nonsynonymous","D97L L122E Q168T",3
"lib2","SARS-CoV-2","CCATTAAGATTGAGAA",5,4.36,NA,NA,NA,NA,NA,NA,"stop","S41T T55* C61S",3
"lib2","SARS-CoV-2","CCATTAAGTGAAAAGA",8,39.9,9.09,-1.74,0.13,2.87,1.17,0.01,">1 nonsynonymous","Y66H F126Y",2
"lib2","SARS-CoV-2","CCATTAATAGTAGATA",1,7.97,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I2A I72Q S113T",3
"lib2","SARS-CoV-2","CCATTACACTCGATTT",5,52.25,10.8,-0.03,0.07,2.9,1.07,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","CCATTACATCACCCAT",9,47.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T46L I80K L122V K128L T170A",5
"lib2","SARS-CoV-2","CCATTACCTTATAGAT",6,67.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G86L F99L V173N",3
"lib2","SARS-CoV-2","CCATTACGATTATGAG",1,31.45,10.78,-0.06,0.09,2.92,1.04,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","CCATTACGGGATTGGT",9,70.19,9.87,-0.97,0.11,2.41,1,0.01,">1 nonsynonymous","A81G F99W K132N G152T",4
"lib2","SARS-CoV-2","CCATTACTAAAAGAAC",3,14.18,6,-4.84,2,1.5,1.38,0.04,">1 nonsynonymous","P54A Y119C L162K",3
"lib2","SARS-CoV-2","CCATTACTCAGGTACG",1,54.88,10.49,-0.35,0.07,2.9,1.06,0,"1 nonsynonymous","G83W",1
"lib2","SARS-CoV-2","CCATTACTCTCCCCTA",1,6.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52D Y119Q K132S",3
"lib2","SARS-CoV-2","CCATTACTGCAGGAAT",6,87.24,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y91T C150K S184V",3
"lib2","SARS-CoV-2","CCATTAGTTATTTTAT",5,34.83,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","C6W F44L N92R",3
"lib2","SARS-CoV-2","CCATTAGTTTAAACGT",3,90.8,10.84,0,0.06,2.98,1.04,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CCATTATAAAAGCATG",6,54.35,6,-4.84,2,1.5,1.27,0.04,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","CCATTATTTCCGTCAA",6,86.66,8.2,-2.64,0.14,1.98,1.08,0.01,">1 nonsynonymous","S45N Y175L",2
"lib2","SARS-CoV-2","CCATTCAAACACTGCA",2,65.3,8.98,-1.86,0.05,2.98,1.04,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","CCATTCAAACCACTGC",7,54.1,9.53,-1.31,0.09,1.98,1,0,"1 nonsynonymous","A89R",1
"lib2","SARS-CoV-2","CCATTCAGATATATCA",2,10.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41T Y93A V103T E141V",4
"lib2","SARS-CoV-2","CCATTCAGTGAGATTA",18,111.9,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N4V A18I T100R Y143R R179E",5
"lib2","SARS-CoV-2","CCATTCATTACTACGA",11,190.59,10.72,-0.11,0.03,2.95,1.05,0,">1 nonsynonymous","S41M I138L P197G",3
"lib2","SARS-CoV-2","CCATTCATTAGTGTCG",2,67.25,10.88,0.05,0.04,2.93,1.08,0,"1 nonsynonymous","R16H",1
"lib2","SARS-CoV-2","CCATTCCACAAAAGGA",4,30.02,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","F167G V180K A190S",3
"lib2","SARS-CoV-2","CCATTCCACAGGATCG",15,401.54,10.82,-0.02,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATTCCCATTCCTAA",3,41.91,6.89,-3.95,0.49,1.5,1.17,0.04,">1 nonsynonymous","P96F F156S K199M",3
"lib2","SARS-CoV-2","CCATTCCCCAATATAC",5,62.5,9.23,-1.6,0.16,1.65,1.17,0.01,">1 nonsynonymous","R16M L38Q N58H",3
"lib2","SARS-CoV-2","CCATTCCCCTACACCG",3,1.87,NA,NA,NA,NA,NA,NA,"stop","Y119* Y143F",2
"lib2","SARS-CoV-2","CCATTCCTCAAGTATC",5,44.97,10.63,-0.2,0.03,2.84,1.15,0,">1 nonsynonymous","K87H L122M",2
"lib2","SARS-CoV-2","CCATTCGCCAGTTAAC",9,115.34,9.53,-1.3,0.04,2.92,1.09,0,">1 nonsynonymous","Y119T K198C",2
"lib2","SARS-CoV-2","CCATTCGCTCTCCCGA",12,182.94,10.83,-0.01,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATTCGGACCCGACA",3,28.14,7.54,-3.3,0.2,1.5,1.09,0.03,">1 nonsynonymous","A14H Q176R",2
"lib2","SARS-CoV-2","CCATTCGGAGGATTTA",5,80.51,10.87,0.03,0.06,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATTCTAAGTCAAAC",2,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71D Q84P D97M I104S G166F",5
"lib2","SARS-CoV-2","CCATTGAAAACGCTTC",2,80.98,10.1,-0.74,0.12,2.02,1.05,0.01,">1 nonsynonymous","T46G D97A K198F",3
"lib2","SARS-CoV-2","CCATTGAAAGTCAAAG",4,29.68,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G117C S129P E135V P177K",4
"lib2","SARS-CoV-2","CCATTGACAACTAAAT",10,45.91,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y35W P54I T63H L95N A105Q",5
"lib2","SARS-CoV-2","CCATTGACATACAAAA",10,141.1,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A89L N107G K128L K199L",4
"lib2","SARS-CoV-2","CCATTGAGGAATTGTA",4,61.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5R L122E I142D P161H G174P",5
"lib2","SARS-CoV-2","CCATTGCAACCCTCGC",2,59.46,10.45,-0.38,0.08,2.72,1.08,0,">1 nonsynonymous","R27V K128V",2
"lib2","SARS-CoV-2","CCATTGCAACGAACGG",9,51,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","A14P N30M V173S",3
"lib2","SARS-CoV-2","CCATTGCAATATCTGC",4,30.06,10.1,-0.73,0.08,2.85,1,0,">1 nonsynonymous","F47V N64T A81M L122H Q168R",5
"lib2","SARS-CoV-2","CCATTGCATCTTTTAA",1,50.26,6,-4.84,1.2,1.5,1.14,0.02,">1 nonsynonymous","K56V G86I Y91S",3
"lib2","SARS-CoV-2","CCATTGCCATTATGGA",10,115.49,9.48,-1.36,0.12,1.9,1.08,0.01,"1 nonsynonymous","P82A",1
"lib2","SARS-CoV-2","CCATTGCCCGAAATTA",3,70.44,10.27,-0.56,0.06,2.87,1.03,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","CCATTGCTTAGACTGA",1,25.87,10.06,-0.78,0.08,2.87,1.11,0,">1 nonsynonymous","L5S E154L",2
"lib2","SARS-CoV-2","CCATTGGAGATGCTAA",3,28.44,9.56,-1.27,0.07,2.38,1.11,0,">1 nonsynonymous","S19E I28M G83N",3
"lib2","SARS-CoV-2","CCATTGGATAGACGGG",4,108.7,9.62,-1.22,0.06,2.92,1.03,0,">1 nonsynonymous","D98N Y119Q",2
"lib2","SARS-CoV-2","CCATTGGCAATCAACT",11,147.65,10.2,-0.63,0.02,2.96,1.05,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","CCATTGGGTTCTAACA",9,122.88,10.93,0.09,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATTGTATAAGCGGA",8,108.33,10.09,-0.74,0.06,2.62,1.02,0,">1 nonsynonymous","I2N D59S Y91R",3
"lib2","SARS-CoV-2","CCATTGTCATCTATCT",1,21.89,10.37,-0.47,0.22,2.72,1.02,0.02,"1 nonsynonymous","F126V",1
"lib2","SARS-CoV-2","CCATTGTGTCACCGGA",1,13.16,6.12,-4.72,0.78,3,1.31,0.02,">1 nonsynonymous","G9L D68Q S129V",3
"lib2","SARS-CoV-2","CCATTGTTAAATGGTA",5,45.24,10.65,-0.19,0.04,3,1.01,0,">1 nonsynonymous","I2V V37W D90F",3
"lib2","SARS-CoV-2","CCATTTAAATTACAGG",1,11.97,10.2,-0.64,0.31,2.02,1,0.05,">1 nonsynonymous","S19P K132H G152Y",3
"lib2","SARS-CoV-2","CCATTTAATATTAGAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","W23* T85V K114T",3
"lib2","SARS-CoV-2","CCATTTATACACACCT",9,132.48,6,-4.84,2,3,1.22,0,">1 nonsynonymous","N4L N92E L122M",3
"lib2","SARS-CoV-2","CCATTTATGTTTTTTG",8,202.78,10.34,-0.5,0.04,2.94,1.07,0,">1 nonsynonymous","T55E G174Y",2
"lib2","SARS-CoV-2","CCATTTCAGACTAGTA",5,100.55,10.78,-0.05,0.05,2.98,1.03,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CCATTTCCAAGTTGGT",1,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","CCATTTCCACGACAGG",6,27.83,10.03,-0.81,0.15,1.89,1.06,0.01,">1 nonsynonymous","P82L Y178H",2
"lib2","SARS-CoV-2","CCATTTCTGAGCCGAC",5,0.67,NA,NA,NA,NA,NA,NA,"stop","L57* G83V",2
"lib2","SARS-CoV-2","CCATTTCTTATTCACA",4,44.27,10.33,-0.51,0.05,2.82,1.08,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","CCATTTGATTCGAAAA",8,1.68,NA,NA,NA,NA,NA,NA,"stop","C6M Y35F F47R I104* P197Q",5
"lib2","SARS-CoV-2","CCATTTGCCCATCTGT",6,21.95,9.19,-1.65,0.12,1.77,1.06,0.01,">1 nonsynonymous","L5Q T15V C49F T55G",4
"lib2","SARS-CoV-2","CCATTTGCGCGACCTA",1,42.3,9.73,-1.1,0.06,2.93,1.04,0,">1 nonsynonymous","S41D Y121A K128N",3
"lib2","SARS-CoV-2","CCATTTGGGTGTCTCT",7,125.27,10.82,-0.01,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCATTTGGTAGATCAA",2,15.9,8.24,-2.6,0.18,1.5,1.05,0.02,">1 nonsynonymous","P82L D90K",2
"lib2","SARS-CoV-2","CCATTTGTGCGCATCC",9,117.39,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G117D K128L T170C",3
"lib2","SARS-CoV-2","CCATTTTCAGCCTACA",9,81.91,10.76,-0.08,0.09,2.86,1.1,0,">1 nonsynonymous","N4K D59S K199C",3
"lib2","SARS-CoV-2","CCATTTTCTATCGAAC",12,148.12,10.62,-0.21,0.04,2.88,1.09,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","CCATTTTGATAATTAA",10,54.61,6.03,-4.81,0.47,2.31,1.16,0.01,">1 nonsynonymous","A42T K128G I142S F167Y",4
"lib2","SARS-CoV-2","CCATTTTTCCTAACAG",6,47.32,10.79,-0.04,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCAAAAAAGCATCAG",5,79.87,10.16,-0.67,0.04,2.99,1.05,0,"1 nonsynonymous","S164I",1
"lib2","SARS-CoV-2","CCCAAAAAAGCTCAAA",5,0.62,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","CCCAAAAAGCACAAAC",4,67.65,6,-4.84,1.48,1.5,1.17,0.02,">1 nonsynonymous","N4S I28N Y66N Q84C K128G T201S",6
"lib2","SARS-CoV-2","CCCAAAAATAGACCTG",4,62.51,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S43Y K87W C150S",3
"lib2","SARS-CoV-2","CCCAAAACAAATTATA",14,249.74,6.96,-3.87,0.19,1.5,1.16,0.01,">1 nonsynonymous","C61K K87S Q176T",3
"lib2","SARS-CoV-2","CCCAAAACCGATATCT",2,1.77,NA,NA,NA,NA,NA,NA,"stop","Y91* F99L R136P",3
"lib2","SARS-CoV-2","CCCAAAAGAATATAGA",1,13.14,8.66,-2.17,0.16,2.32,1.01,0.01,">1 nonsynonymous","N118F S164L",2
"lib2","SARS-CoV-2","CCCAAAAGACAGATTA",3,35.8,10.19,-0.64,0.05,2.94,1.09,0,">1 nonsynonymous","I104W G174H",2
"lib2","SARS-CoV-2","CCCAAAAGCCTAGACT",7,83.7,10.67,-0.16,0.02,2.95,1.07,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","CCCAAAAGTAGAATAT",5,15.82,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S43L G86S V103Y Y121R R124H P133S L187Q",7
"lib2","SARS-CoV-2","CCCAAAAGTTAAGATG",5,142.86,10.66,-0.18,0.03,2.93,1.06,0,"1 nonsynonymous","Y121H",1
"lib2","SARS-CoV-2","CCCAAAATAGAACGTA",2,8.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T Y35G N64I S69N C102W",5
"lib2","SARS-CoV-2","CCCAAAATCCACGAAC",2,19.32,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","R27Y C49I F99Y",3
"lib2","SARS-CoV-2","CCCAAACAAATGCTAA",3,203.05,6,-4.84,0.86,1.5,1.1,0,"1 nonsynonymous","D68P",1
"lib2","SARS-CoV-2","CCCAAACACCCCATAA",2,1.08,NA,NA,NA,NA,NA,NA,"stop","N58S V77L D98R R136* Y175I",5
"lib2","SARS-CoV-2","CCCAAACAGACCTATT",8,77.72,10.73,-0.1,0.03,2.92,1.07,0,"1 nonsynonymous","A190V",1
"lib2","SARS-CoV-2","CCCAAACAGATAGAAA",10,0.73,NA,NA,NA,NA,NA,NA,"stop","L95K T201*",2
"lib2","SARS-CoV-2","CCCAAACCAACATGTA",2,17.83,6,-4.84,2,3,1.22,0,">1 nonsynonymous","C6L N92D L95G D98N",4
"lib2","SARS-CoV-2","CCCAAACGATCACTGG",1,10.71,9.93,-0.91,0.19,2.61,1,0.02,">1 nonsynonymous","G83S D90S G174P",3
"lib2","SARS-CoV-2","CCCAAACGGATCTTAT",3,49.1,8.9,-1.94,0.09,2.69,1.06,0,">1 nonsynonymous","F8A A33K N64D L125Q",4
"lib2","SARS-CoV-2","CCCAAACGTTGTCAGT",5,0.5,NA,NA,NA,NA,NA,NA,"stop","T55A D68* G174R T201D",4
"lib2","SARS-CoV-2","CCCAAACTATTATCCG",7,72.28,10.14,-0.69,0.06,2.71,1.05,0,">1 nonsynonymous","I138W N151A",2
"lib2","SARS-CoV-2","CCCAAACTGCCTAGAG",5,44.83,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D97Y D137T R179W",3
"lib2","SARS-CoV-2","CCCAAAGAAAGAAGCG",6,180.99,9.05,-1.79,0.07,2.59,1.08,0,">1 nonsynonymous","V37R I138L Q176L",3
"lib2","SARS-CoV-2","CCCAAAGAACTAATCC",10,98.6,7.59,-3.24,0.21,1.57,1.11,0.01,">1 nonsynonymous","Y35C S41W F62S Y143L",4
"lib2","SARS-CoV-2","CCCAAAGACCTTCCCC",5,48.41,10.88,0.04,0.14,2.88,1.02,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCCAAAGAGAAAGGTA",2,63.82,9.7,-1.14,0.04,2.81,1.04,0,">1 nonsynonymous","G9S P161G",2
"lib2","SARS-CoV-2","CCCAAAGAGGGGCAAT",8,3.43,NA,NA,NA,NA,NA,NA,"stop","P7L F99C N151S V173*",4
"lib2","SARS-CoV-2","CCCAAAGATTATTCTA",3,96.73,10.91,0.07,0.06,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCAAAGCAATATTCT",5,142.12,10.82,-0.01,0.05,2.92,1.09,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","CCCAAAGCAGGATAAG",1,7.5,6,-4.84,2,1.5,1.04,0.06,">1 nonsynonymous","C6K F47N E141Y",3
"lib2","SARS-CoV-2","CCCAAAGCCGAAAGCC",6,63.65,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V20E L95P L162T V173A",4
"lib2","SARS-CoV-2","CCCAAAGCCGGCTACG",5,44.32,10.57,-0.27,0.09,2.69,1.28,0,">1 nonsynonymous","D98H N151H",2
"lib2","SARS-CoV-2","CCCAAAGCTCTAGTCG",2,24.46,9.27,-1.56,0.19,1.61,1.13,0.02,">1 nonsynonymous","T3L S45I N151W",3
"lib2","SARS-CoV-2","CCCAAAGGTGTGCACA",19,345.87,10.75,-0.09,0.02,2.93,1.08,0,">1 nonsynonymous","C61A S200K",2
"lib2","SARS-CoV-2","CCCAAAGTTATGACGG",4,61.25,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","N4R Y39Q F62D D68A P82L",5
"lib2","SARS-CoV-2","CCCAAATAATCAACAA",3,15.16,10.17,-0.67,0.11,2.74,1.16,0,">1 nonsynonymous","T3L T15L",2
"lib2","SARS-CoV-2","CCCAAATAGAAGAGAG",1,11.92,9.45,-1.38,0.45,1.56,1.06,0.06,">1 nonsynonymous","W23M S53D K87R F160V",4
"lib2","SARS-CoV-2","CCCAAATATAAGAACA",4,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P F126T",2
"lib2","SARS-CoV-2","CCCAAATATTTAACAA",9,121.16,7.95,-2.89,0.16,1.67,1.06,0.01,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CCCAAATCTATGCTTT",6,56.25,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G86W P161I",2
"lib2","SARS-CoV-2","CCCAAATGATTACTAT",8,103.68,10.11,-0.72,0.08,2.61,1.04,0,">1 nonsynonymous","T100D T148D",2
"lib2","SARS-CoV-2","CCCAAATTGGGAATTG",20,51.62,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","F8G C102R Y119F P133L P149L T170E",6
"lib2","SARS-CoV-2","CCCAAATTTAAGATAG",10,49.45,6.69,-4.14,0.28,1.5,1.12,0.01,">1 nonsynonymous","N40I G86N P197R",3
"lib2","SARS-CoV-2","CCCAAATTTATGATCC",4,68.74,8.56,-2.27,0.15,1.81,1.13,0.01,">1 nonsynonymous","L5S R73L A89S",3
"lib2","SARS-CoV-2","CCCAAATTTCAGGAGG",2,4.32,NA,NA,NA,NA,NA,NA,"stop","T55* W106L Y121V",3
"lib2","SARS-CoV-2","CCCAACAAACGTTTTG",2,3.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","CCCAACAAAGACAAAA",3,24.07,7.47,-3.36,0.38,1.5,1.02,0.03,">1 nonsynonymous","K56N P82D I142H",3
"lib2","SARS-CoV-2","CCCAACAATTTTAGCA",6,39.35,10.92,0.08,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCAACACAGCCTCAC",6,116.12,9.89,-0.95,0.05,2.55,1.02,0,">1 nonsynonymous","G51N R127A N151S",3
"lib2","SARS-CoV-2","CCCAACACGGACCAAG",9,4.43,NA,NA,NA,NA,NA,NA,"stop","S41Y D90S N118R Y123* N151H",5
"lib2","SARS-CoV-2","CCCAACCACGACAACT",4,27.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99T G155N T201M",3
"lib2","SARS-CoV-2","CCCAACCAGAAATGAT",11,38.28,8.85,-1.98,0.05,1.92,1.02,0,">1 nonsynonymous","C61L N107T",2
"lib2","SARS-CoV-2","CCCAACCCCCGTGATA",10,6.98,NA,NA,NA,NA,NA,NA,"stop","N13W V32* G74C P197E",4
"lib2","SARS-CoV-2","CCCAACCCCTGAAAGT",1,85.57,9.96,-0.88,0.07,2.55,1.08,0,">1 nonsynonymous","T15C K132M I138M",3
"lib2","SARS-CoV-2","CCCAACCCCTTCACAC",2,5.4,6.87,-3.96,0.15,1.5,1,0,">1 nonsynonymous","T15I Y21A D90Y N130Q",4
"lib2","SARS-CoV-2","CCCAACCCTAACCAAT",5,51.64,6,-4.84,1.6,1.5,1.16,0.02,">1 nonsynonymous","I72M A81Y V173Q",3
"lib2","SARS-CoV-2","CCCAACCCTATCCATT",5,1.76,NA,NA,NA,NA,NA,NA,"stop","V77* P96N D137Y N151E",4
"lib2","SARS-CoV-2","CCCAACCCTATGCCCA",5,234.62,10.76,-0.08,0.04,2.93,1.08,0,">1 nonsynonymous","P169T P197L",2
"lib2","SARS-CoV-2","CCCAACCGAAGTCAAA",3,22.46,10.76,-0.07,0.07,3,1,0,"1 nonsynonymous","F160N",1
"lib2","SARS-CoV-2","CCCAACCGTGCCACTG",4,75.05,9.82,-1.02,0.07,2.9,1.12,0,">1 nonsynonymous","A18S T170Y T201M",3
"lib2","SARS-CoV-2","CCCAACGAAGCCTACC",3,12.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6I P161E",2
"lib2","SARS-CoV-2","CCCAACGCACTATGCG",1,22.1,10.87,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCAACGTGCTCGCCC",7,87.8,9.12,-1.72,0.06,2.81,1.16,0,">1 nonsynonymous","L38F Y119S V153G T201W",4
"lib2","SARS-CoV-2","CCCAACGTTATATTCA",7,43.82,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6F A14R A81T Y91I Y121N P149W",6
"lib2","SARS-CoV-2","CCCAACTAATAAGACA",7,47.86,6.06,-4.78,0.92,1.5,1.12,0.02,">1 nonsynonymous","I28W N92T",2
"lib2","SARS-CoV-2","CCCAACTAATTTCACG",3,19.91,6,-4.84,2,1.5,1.36,0.03,">1 nonsynonymous","D68N Q144R",2
"lib2","SARS-CoV-2","CCCAACTAATTTTCGC",5,58.38,6,-4.84,2,3,1.13,0,"1 nonsynonymous","A67D",1
"lib2","SARS-CoV-2","CCCAACTATACTGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* D98F G172F Y178S",4
"lib2","SARS-CoV-2","CCCAACTCCTACCCGC",10,38.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F47L L162G",2
"lib2","SARS-CoV-2","CCCAACTCGGTCGCCA",10,162.72,10.67,-0.16,0.03,2.95,1.03,0,">1 nonsynonymous","F47L Q84M",2
"lib2","SARS-CoV-2","CCCAACTGAAAATATC",2,6.65,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","F44L Y91T K94R D97Y V181P",5
"lib2","SARS-CoV-2","CCCAACTGATATAAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Q C49R K87S L95* N171S R179G",6
"lib2","SARS-CoV-2","CCCAACTGCGCTTCGA",4,31.14,10.56,-0.27,0.44,1.9,1.07,0.04,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CCCAACTTGTAGCGCA",3,19.97,11.05,0.22,0.08,2.85,1.17,0,">1 nonsynonymous","K128D T140E P197A",3
"lib2","SARS-CoV-2","CCCAACTTTATTTCGA",3,25.12,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S41V G101Y N107P A192E",4
"lib2","SARS-CoV-2","CCCAAGAAAACTTAGA",1,16.78,10.7,-0.14,0.07,2.89,1.08,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","CCCAAGAAACGAAAAC",5,93.95,10.25,-0.58,0.03,2.89,1.07,0,">1 nonsynonymous","S147T Q176M",2
"lib2","SARS-CoV-2","CCCAAGAAACGCAAAT",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11P G101S",2
"lib2","SARS-CoV-2","CCCAAGAAGACGAGTC",3,143.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9S V32P T46I G83R T100S S164K Y178I",7
"lib2","SARS-CoV-2","CCCAAGAAGCTAGTAT",1,19.01,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V20P W106G K128F P133L T140Y N157L",6
"lib2","SARS-CoV-2","CCCAAGATAGCACCAC",2,8.02,6,-4.84,2,3,1.05,0,">1 nonsynonymous","R27K F44N K132N P149F Y165K",5
"lib2","SARS-CoV-2","CCCAAGATATACGTTT",7,50.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L95F D112K R136K",3
"lib2","SARS-CoV-2","CCCAAGCCCTTCCCAA",13,88.22,7.67,-3.17,0.18,1.5,1.12,0.01,">1 nonsynonymous","V77L D112T L187Y",3
"lib2","SARS-CoV-2","CCCAAGCGCGTCCATA",10,8.45,NA,NA,NA,NA,NA,NA,"stop","F12A A42L C61H K87* D98V A105* K199M",7
"lib2","SARS-CoV-2","CCCAAGGAAAACGTAC",6,38.03,7.72,-3.11,0.19,1.67,1.07,0.01,">1 nonsynonymous","A22F D90L G146H K198L",4
"lib2","SARS-CoV-2","CCCAAGGAAAATGTAA",9,149.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S29L N40D G166L R179E",4
"lib2","SARS-CoV-2","CCCAAGGACTACCCGG",3,28.66,10.85,0.02,0.06,3,1.01,0,">1 nonsynonymous","T85Q L111V P149K",3
"lib2","SARS-CoV-2","CCCAAGGGACTGCAAT",1,7.81,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","V11L R127C A145I G172M",4
"lib2","SARS-CoV-2","CCCAAGGTTTGAACTT",14,107.34,10.78,-0.06,0.06,2.88,1.07,0,">1 nonsynonymous","V37F L183V",2
"lib2","SARS-CoV-2","CCCAAGTCATTCTAAA",3,112.2,9.42,-1.42,0.08,2.79,1.1,0,">1 nonsynonymous","S36V F156C",2
"lib2","SARS-CoV-2","CCCAAGTCCCCAGGTT",12,51.83,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V71K K94I",2
"lib2","SARS-CoV-2","CCCAAGTCGTATGGAC",9,30.82,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","D34L Y91S G152D",3
"lib2","SARS-CoV-2","CCCAAGTGCACACGAA",7,42.55,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6S R27E L57K F99S L122I L183I",6
"lib2","SARS-CoV-2","CCCAAGTGGATAAACT",9,55.8,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14K Y35T F99S",3
"lib2","SARS-CoV-2","CCCAAGTTCTAAGATT",5,0.11,NA,NA,NA,NA,NA,NA,"stop","P82* G116* F160C",3
"lib2","SARS-CoV-2","CCCAATAAAACACAAA",6,33.84,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S41F L57F L60H G86L G101I R127P L187Y",7
"lib2","SARS-CoV-2","CCCAATAAACAGACCT",7,3.12,NA,NA,NA,NA,NA,NA,"stop","N1D V103* A190E",3
"lib2","SARS-CoV-2","CCCAATAAATGTATCG",1,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CCCAATAATAGTATAT",12,193.04,8.51,-2.32,0.11,2.7,1.06,0,">1 nonsynonymous","L60P Q168L",2
"lib2","SARS-CoV-2","CCCAATAATGATGACT",6,14.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6I S19L P96Y R127H L162A Y175L",6
"lib2","SARS-CoV-2","CCCAATACCTCCCACT",10,103.39,10.39,-0.45,0.04,2.89,1.07,0,">1 nonsynonymous","D97Y Q163N",2
"lib2","SARS-CoV-2","CCCAATAGCTATCAGC",4,76.46,9.88,-0.95,0.08,2.15,1.04,0,">1 nonsynonymous","L5S T55K C61W T100W A105S",5
"lib2","SARS-CoV-2","CCCAATAGTGCGATAT",4,21.03,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y35R S41G F185C",3
"lib2","SARS-CoV-2","CCCAATATATCATACT",10,195.84,10.66,-0.18,0.03,2.91,1.09,0,">1 nonsynonymous","L5Y F44H P197R",3
"lib2","SARS-CoV-2","CCCAATATATCTACAC",1,33.51,9.51,-1.33,0.15,2.33,1.17,0.01,">1 nonsynonymous","E10L V32A T85V",3
"lib2","SARS-CoV-2","CCCAATATGAAAATCG",14,76.58,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E76R N157C",2
"lib2","SARS-CoV-2","CCCAATCAAGCGACAA",16,3.23,NA,NA,NA,NA,NA,NA,"stop","A42T T201*",2
"lib2","SARS-CoV-2","CCCAATCACCAGACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T N58S K87T C102M R127N T140L",6
"lib2","SARS-CoV-2","CCCAATCAGATCCGCA",4,44.02,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","W106M P133D Q176L K199Y",4
"lib2","SARS-CoV-2","CCCAATCGGTTACTAA",17,250.54,8.4,-2.43,0.08,2.35,1.09,0,">1 nonsynonymous","C6G L60T R78K Y121I",4
"lib2","SARS-CoV-2","CCCAATCGTATATCAT",5,80.01,10.24,-0.6,0.04,2.9,1.01,0,">1 nonsynonymous","A33R L122A S147K",3
"lib2","SARS-CoV-2","CCCAATCTAATATTCG",1,53.86,9.19,-1.64,0.08,2.77,1.06,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","CCCAATCTGTGTTTCA",12,68.45,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N1P S69R G101A",3
"lib2","SARS-CoV-2","CCCAATCTTTAAACAA",5,49.01,7.04,-3.8,0.4,1.5,1.19,0.04,">1 nonsynonymous","P177S V182A",2
"lib2","SARS-CoV-2","CCCAATGAAACCTTTT",4,52.17,10.3,-0.53,0.07,2.93,1.06,0,"1 nonsynonymous","S45M",1
"lib2","SARS-CoV-2","CCCAATGATATAAAGT",7,1.58,NA,NA,NA,NA,NA,NA,"stop","Y35H G116T K128C Q176*",4
"lib2","SARS-CoV-2","CCCAATGATCATTCAG",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110R F126T I142H",3
"lib2","SARS-CoV-2","CCCAATGATCCAACAC",5,15.4,9.19,-1.65,0.25,1.5,1.1,0.03,">1 nonsynonymous","G9Y A105L",2
"lib2","SARS-CoV-2","CCCAATGCATAGGTTA",4,4.5,NA,NA,NA,NA,NA,NA,"stop","R25S S36Y K87H F99K N107* G174L",6
"lib2","SARS-CoV-2","CCCAATGCCACAAAAT",6,67.53,NA,NA,NA,NA,NA,NA,"stop","E76* G174N",2
"lib2","SARS-CoV-2","CCCAATGCCAGCTTAT",4,53.26,6.5,-4.34,0.23,1.9,1.16,0.01,">1 nonsynonymous","F12W S113K Y143R",3
"lib2","SARS-CoV-2","CCCAATTAGAGACACG",3,41.09,10.37,-0.46,0.04,2.92,1.09,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","CCCAATTAGATAATGG",1,28.57,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K94Q F167R A190C",3
"lib2","SARS-CoV-2","CCCAATTCACCGTACG",5,51.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36L S41C A105K N151Q",4
"lib2","SARS-CoV-2","CCCAATTCATGGCGGA",5,1.06,NA,NA,NA,NA,NA,NA,"stop","F47L I72W W106V Y123*",4
"lib2","SARS-CoV-2","CCCAATTCGAATAACT",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G F126H",2
"lib2","SARS-CoV-2","CCCAATTGCACATAGG",16,45.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1S L60W I88V L95T V153P",5
"lib2","SARS-CoV-2","CCCAATTTCTGGACCT",4,42.88,10.28,-0.55,0.04,2.94,1.03,0,">1 nonsynonymous","T15I E141T",2
"lib2","SARS-CoV-2","CCCAATTTTTTTCCCA",8,227.77,10.25,-0.58,0.03,2.86,1.08,0,">1 nonsynonymous","P54C A105S",2
"lib2","SARS-CoV-2","CCCACAAAAAAACCCC",1,11.52,10.63,-0.2,0.05,3,1.01,0,"1 nonsynonymous","F44K",1
"lib2","SARS-CoV-2","CCCACAAAATCATAAT",17,470.35,9.91,-0.93,0.03,2.4,1.06,0,">1 nonsynonymous","T140Y V173S",2
"lib2","SARS-CoV-2","CCCACAAAATTGAAAG",4,44.94,8.81,-2.03,0.15,1.5,1.07,0.01,">1 nonsynonymous","S41R P82A L122F",3
"lib2","SARS-CoV-2","CCCACAAACTAAAACA",1,70.8,10.25,-0.58,0.06,2.87,1.05,0,">1 nonsynonymous","K48M T55Y F62V D90A",4
"lib2","SARS-CoV-2","CCCACAAAGAGCACGA",3,61.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S45R Y143K",2
"lib2","SARS-CoV-2","CCCACAAAGTCCGGTC",15,106.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95N L125R",2
"lib2","SARS-CoV-2","CCCACAAATTCAACGT",2,5.39,7.33,-3.5,0.68,1.5,1.18,0.07,">1 nonsynonymous","T3N T15I R27C D90G",4
"lib2","SARS-CoV-2","CCCACAAATTCCTCTG",2,58.38,10.28,-0.56,0.02,3,1,0,">1 nonsynonymous","R27Q Y35W Y143L",3
"lib2","SARS-CoV-2","CCCACAACCGTCATGA",1,16.78,6.08,-4.76,0.65,2.14,1.21,0.01,">1 nonsynonymous","G9Y V103A",2
"lib2","SARS-CoV-2","CCCACAACGAAAACAT",4,33.79,10,-0.84,0.07,2.44,1.09,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","CCCACAAGATATTATT",10,152.72,8.42,-2.41,0.14,1.84,1.08,0.01,">1 nonsynonymous","G51P Y119N Q168R",3
"lib2","SARS-CoV-2","CCCACAAGGCTTTTGC",7,76.68,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L95G G155E A190S",3
"lib2","SARS-CoV-2","CCCACAAGGTCTGTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K26F C61* G83H",3
"lib2","SARS-CoV-2","CCCACAATATAACCGA",2,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S E141H F167Y P197R",4
"lib2","SARS-CoV-2","CCCACAATATCATTCC",1,10.76,9.06,-1.78,0.31,1.99,1.31,0.05,">1 nonsynonymous","I2Y K87S I142Y",3
"lib2","SARS-CoV-2","CCCACAATCTGACGAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","CCCACACAAGGTGCTA",6,34.2,9.47,-1.36,0.07,1.92,1.02,0,">1 nonsynonymous","V20A V32I D97Y Q144N S184Y",5
"lib2","SARS-CoV-2","CCCACACAATATCCTC",11,92.12,6.03,-4.8,0.56,1.5,1.12,0.01,">1 nonsynonymous","W23R C61S G174R",3
"lib2","SARS-CoV-2","CCCACACGAGCCTATT",3,14.98,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V20T D34P P133E",3
"lib2","SARS-CoV-2","CCCACACTAAATGTAT",2,15.78,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","K114V F167Q",2
"lib2","SARS-CoV-2","CCCACACTTGCAGCTA",6,34.79,6,-4.84,1.58,3,1.22,0.01,">1 nonsynonymous","G101S Y165H",2
"lib2","SARS-CoV-2","CCCACAGAGTGCGTAT",8,50.04,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","L5N V20D Y39V V71E G117C",5
"lib2","SARS-CoV-2","CCCACAGATCTAATGT",2,16.38,6.06,-4.78,0.6,1.5,1.04,0.01,">1 nonsynonymous","D98C G116C L122R C150S",4
"lib2","SARS-CoV-2","CCCACAGCATGAACAT",7,107.82,10.59,-0.25,0.04,2.87,1.13,0,">1 nonsynonymous","S45D G51N S184L",3
"lib2","SARS-CoV-2","CCCACAGTCTCGATCT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","L5* S139R T170L",3
"lib2","SARS-CoV-2","CCCACAGTTGATAATG",2,8.35,6,-4.84,2,3,1.05,0,">1 nonsynonymous","S45L D59C K94S S129K",4
"lib2","SARS-CoV-2","CCCACATAAAAATTAA",7,106.64,10.82,-0.01,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCACATAAAGTAGCC",5,25.37,6,-4.84,1.25,3,1.16,0,">1 nonsynonymous","N13M T100S C158L",3
"lib2","SARS-CoV-2","CCCACATAGAGTTCAA",2,25.52,7.96,-2.87,0.3,1.61,1.08,0.03,">1 nonsynonymous","K87T P133N G146T G174K",4
"lib2","SARS-CoV-2","CCCACATCTAGTTCTA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","N4L F134*",2
"lib2","SARS-CoV-2","CCCACATTCGGTTGTA",1,9.91,9.34,-1.5,0.41,1.51,1.16,0.04,">1 nonsynonymous","V77M L95I N118I Q163V",4
"lib2","SARS-CoV-2","CCCACATTGAAACCAA",3,3.3,NA,NA,NA,NA,NA,NA,"stop","N107* A145T",2
"lib2","SARS-CoV-2","CCCACCAATGAGAAAG",1,20.29,6.03,-4.8,1.21,1.5,1.1,0.05,">1 nonsynonymous","V37S G86A I142R",3
"lib2","SARS-CoV-2","CCCACCACCTGGAGAT",11,66.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4H E10A I80R D137G A190V",5
"lib2","SARS-CoV-2","CCCACCAGGAGTGCGA",4,54.23,10.22,-0.62,0.06,2.91,1,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CCCACCCACAAAAAGG",1,0.75,NA,NA,NA,NA,NA,NA,"stop","T3* Q168E",2
"lib2","SARS-CoV-2","CCCACCCATATTCTAA",17,165.57,10.22,-0.61,0.05,2.59,1.01,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CCCACCGAAACGATCA",8,132.23,10.78,-0.05,0.04,2.88,1.12,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","CCCACCGAATCATAAG",7,55.91,10.68,-0.16,0.05,2.94,1.04,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","CCCACCGGGAGTGCAG",9,43.01,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D97L I138N V181P",3
"lib2","SARS-CoV-2","CCCACCGGTTGTCGGT",7,67,10.48,-0.36,0.05,2.88,1.02,0,">1 nonsynonymous","S41I S139A",2
"lib2","SARS-CoV-2","CCCACCTATGTATCTT",1,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","CCCACCTTCGCGGATT",13,219.33,9.55,-1.28,0.02,2.99,1.02,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","CCCACGAAGCGCGGTT",3,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L K94Q P149W A190S",4
"lib2","SARS-CoV-2","CCCACGATATTCAACT",2,28.13,10.88,0.04,0.09,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCACGATTTAGTGAA",2,17.68,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V37I R179G",2
"lib2","SARS-CoV-2","CCCACGCACACAGTGA",1,21.32,10.39,-0.45,0.08,3,1,0,">1 nonsynonymous","G9Q T15L G51H Y178H",4
"lib2","SARS-CoV-2","CCCACGCACAGAGAAA",3,33.73,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F70L Y165S T201V",3
"lib2","SARS-CoV-2","CCCACGCGCCACCATT",3,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40H R78S L122Q T140L F160S",5
"lib2","SARS-CoV-2","CCCACGCGTCCCGAGC",4,45.79,8.49,-2.34,0.14,1.57,1.08,0.01,">1 nonsynonymous","N92S R136L",2
"lib2","SARS-CoV-2","CCCACGCTGACCACGT",2,15.87,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","I2F A89G E141H Y175D",4
"lib2","SARS-CoV-2","CCCACGGACTCTACCT",6,26.57,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L5N Y91D S113K",3
"lib2","SARS-CoV-2","CCCACGGTGGTCTCCC",1,8.36,10.07,-0.77,0.25,1.81,1.11,0.02,">1 nonsynonymous","T3I D34C R78A P96S",4
"lib2","SARS-CoV-2","CCCACGTAAGTTGACA",2,20.24,6.32,-4.52,1.08,1.5,1.24,0.06,">1 nonsynonymous","L57I F99M S129L",3
"lib2","SARS-CoV-2","CCCACGTAATAGAAGT",1,26.1,8.62,-2.22,0.14,2,1.12,0.01,"1 nonsynonymous","F8R",1
"lib2","SARS-CoV-2","CCCACGTAGTAATCAG",10,171.83,10.88,0.04,0.04,2.9,1.08,0,">1 nonsynonymous","F134Y T201K",2
"lib2","SARS-CoV-2","CCCACGTGAGCAAAGC",5,4.43,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib2","SARS-CoV-2","CCCACGTTCGCATAGG",6,2.03,NA,NA,NA,NA,NA,NA,"stop","K26* N92C",2
"lib2","SARS-CoV-2","CCCACTAAAATACTAC",4,65.66,10.6,-0.24,0.03,2.92,1.1,0,">1 nonsynonymous","N40K V52L S53P C61V S164P",5
"lib2","SARS-CoV-2","CCCACTACGACCGATG",17,63.82,6.32,-4.52,0.7,1.5,1.21,0.02,">1 nonsynonymous","Y50L E135L V182F",3
"lib2","SARS-CoV-2","CCCACTACGGTTATAT",11,63.45,7.69,-3.15,0.13,1.5,1.06,0.01,">1 nonsynonymous","P82Q G174M",2
"lib2","SARS-CoV-2","CCCACTATCTTAAATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","CCCACTATGCTCGTTA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S19M C49Q Y178*",3
"lib2","SARS-CoV-2","CCCACTCAAAATAGCA",2,27.33,10.88,0.04,0.07,2.88,1.13,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","CCCACTCATCAGCTCG",2,46.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12D A18G N40P G83E D98E I142K G174V E186D",8
"lib2","SARS-CoV-2","CCCACTCGAATAAACA",12,73.79,10.89,0.05,0.05,2.86,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCACTCTATACTTCT",4,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","CCCACTCTCGCATCAG",16,84.59,8.7,-2.14,0.3,1.5,1,0.04,">1 nonsynonymous","L5S Y35R P96S F160D",4
"lib2","SARS-CoV-2","CCCACTCTGCGGATTT",7,27.06,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V37E S45H L60R A81F K94M",5
"lib2","SARS-CoV-2","CCCACTGAAAGTACGA",2,27.02,6.29,-4.54,0.67,1.5,1.11,0.03,">1 nonsynonymous","N4R Y35P G146L N151G",4
"lib2","SARS-CoV-2","CCCACTGCCTCCGCGA",2,0,NA,NA,NA,NA,NA,NA,"stop","N40T C49Y P96N F185*",4
"lib2","SARS-CoV-2","CCCACTGCTTATTTTT",10,83.96,9.22,-1.62,0.06,2.87,1.1,0,">1 nonsynonymous","V37L E154Y",2
"lib2","SARS-CoV-2","CCCACTGTGGACCGTG",3,114.36,10.79,-0.05,0.07,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCACTGTGGATAGAA",4,59.42,10.9,0.06,0.05,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCACTTAAAATGACG",4,113.96,7.28,-3.56,0.13,2.34,1.15,0,">1 nonsynonymous","D97F Y175E",2
"lib2","SARS-CoV-2","CCCACTTTCTATCGCA",2,98.63,10.79,-0.04,0.05,2.9,1.11,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","CCCAGAAAACGACTTT",2,6.14,9.8,-1.04,0.06,3,1,0,"1 nonsynonymous","Q79R",1
"lib2","SARS-CoV-2","CCCAGAAACAACAGCT",4,77.48,9.04,-1.8,0.05,2.87,1.04,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","CCCAGAAAGATTATAG",2,7.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G116A C150W",2
"lib2","SARS-CoV-2","CCCAGAACATACACAG",1,26.29,6.76,-4.08,0.24,1.72,1.06,0.01,">1 nonsynonymous","K56Q R73K G83H C158K",4
"lib2","SARS-CoV-2","CCCAGAAGGACAAAAC",5,37.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T55S T63Q L162D",3
"lib2","SARS-CoV-2","CCCAGAAGTACTTTAG",1,58.46,9.78,-1.05,0.09,2.22,1,0,">1 nonsynonymous","F44V K56I D97W",3
"lib2","SARS-CoV-2","CCCAGAATACGCCTAA",5,127.58,8.96,-1.87,0.05,2.98,1.09,0,">1 nonsynonymous","K87L Y119N P149S",3
"lib2","SARS-CoV-2","CCCAGACCAAGCAACA",10,74.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P82L D137S",2
"lib2","SARS-CoV-2","CCCAGACCATCATAAA",7,93.12,6.56,-4.27,0.37,1.5,1.13,0.01,">1 nonsynonymous","A81E T140V Y178D",3
"lib2","SARS-CoV-2","CCCAGACCATGCTGGG",2,40.3,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I28Q Y35N Y123C",3
"lib2","SARS-CoV-2","CCCAGACCGATCACTA",4,37.12,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","I88N",1
"lib2","SARS-CoV-2","CCCAGACGGGCCTCAA",8,0.26,NA,NA,NA,NA,NA,NA,"stop","V37S K87S Y119L P149*",4
"lib2","SARS-CoV-2","CCCAGATAATGAGAAT",6,106.29,10.58,-0.26,0.06,2.89,1.13,0,">1 nonsynonymous","L111N S200Y",2
"lib2","SARS-CoV-2","CCCAGATCATCCTAAG",1,6.43,8.32,-2.52,0.39,1.72,1.14,0.04,">1 nonsynonymous","Y35G T55L N107R F156R",4
"lib2","SARS-CoV-2","CCCAGATTAACAGAAA",8,58.21,8.21,-2.63,0.13,2.05,1.08,0.01,">1 nonsynonymous","G116L G117V P149H",3
"lib2","SARS-CoV-2","CCCAGATTAATTCACA",2,0.53,NA,NA,NA,NA,NA,NA,"stop","T85S K199*",2
"lib2","SARS-CoV-2","CCCAGATTCCCCAAAT",2,8.52,9.65,-1.18,0.11,2.91,1.08,0.01,">1 nonsynonymous","S45P V65C T170S",3
"lib2","SARS-CoV-2","CCCAGATTGCAGAGAC",15,90.26,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","F8M W23C G101D A105T D112M Y119W K128R E154Y",8
"lib2","SARS-CoV-2","CCCAGCAACCGGAATG",2,45.73,10.14,-0.7,0.05,2.98,1,0,">1 nonsynonymous","R27T A105S I142P",3
"lib2","SARS-CoV-2","CCCAGCAAGAGTAAAC",12,56.38,6,-4.84,0.64,3,1.3,0.01,">1 nonsynonymous","F8G P96H",2
"lib2","SARS-CoV-2","CCCAGCATATTCCATG",1,5.7,6,-4.84,2,3,1.06,0,">1 nonsynonymous","R25K D98K S113K",3
"lib2","SARS-CoV-2","CCCAGCCCCAACAAAA",8,181.84,10.81,-0.03,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCAGCCCCACCGTTG",3,25.73,10.74,-0.09,0.04,3,1.01,0,">1 nonsynonymous","T63A D75A",2
"lib2","SARS-CoV-2","CCCAGCCCGATACTAA",1,11.33,10.77,-0.07,0.1,2.83,1.18,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","CCCAGCCGTATATACT",3,5.98,6.65,-4.18,0.71,2.64,1.09,0.06,">1 nonsynonymous","N1E D68K L95C C158N",4
"lib2","SARS-CoV-2","CCCAGCGCGCTCCCCT",11,142.17,10.82,-0.01,0.03,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCAGCTCACTTGAAT",2,33.2,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68T Y165S",2
"lib2","SARS-CoV-2","CCCAGCTCGCTCAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib2","SARS-CoV-2","CCCAGCTTGATCAATC",4,2.09,NA,NA,NA,NA,NA,NA,"stop","Q79* N92T D97M C158T",4
"lib2","SARS-CoV-2","CCCAGCTTTGTATACA",6,150.48,10.43,-0.41,0.03,2.97,1.03,0,"1 nonsynonymous","P169V",1
"lib2","SARS-CoV-2","CCCAGGAACTCTCATT",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T A105W L162M",3
"lib2","SARS-CoV-2","CCCAGGAATAATAATA",4,19.33,8.09,-2.74,0.42,1.5,1.19,0.05,">1 nonsynonymous","V37M T63W C102V T201S",4
"lib2","SARS-CoV-2","CCCAGGATGACGCAAT",3,136.37,8.36,-2.48,0.12,2.6,1.12,0.01,"1 nonsynonymous","Y175R",1
"lib2","SARS-CoV-2","CCCAGGATTTAGCCCG",1,22.39,10.66,-0.18,0.11,2.8,1.24,0,">1 nonsynonymous","R16S F62T Q144A",3
"lib2","SARS-CoV-2","CCCAGGCAAATATTAC",3,57.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N24K L60S P149N Q176V",4
"lib2","SARS-CoV-2","CCCAGGCCACTCTGTC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","CCCAGGCGTACGAACT",3,9.1,10.38,-0.46,0.1,2.6,1,0.01,">1 nonsynonymous","K48S N120R Q144R G152N",4
"lib2","SARS-CoV-2","CCCAGGGAAAATGATG",5,32.15,8.76,-2.07,0.13,1.91,1.13,0.01,"1 nonsynonymous","F12N",1
"lib2","SARS-CoV-2","CCCAGGGGACAATGCG",4,101.89,9.82,-1.01,0.05,2.68,1.02,0,">1 nonsynonymous","C6L K56H N151H",3
"lib2","SARS-CoV-2","CCCAGGGGGGTGATTT",3,8.07,7.67,-3.16,0.59,1.71,1.34,0.04,">1 nonsynonymous","A14V G83V V173I",3
"lib2","SARS-CoV-2","CCCAGGTGGTACACCC",3,150.56,10.44,-0.39,0.05,2.96,1.05,0,"1 nonsynonymous","G155E",1
"lib2","SARS-CoV-2","CCCAGGTTAAAACCAC",11,272.15,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K94T N120V F134Y Q144V F156T Y175G",6
"lib2","SARS-CoV-2","CCCAGTAAAGGTATCG",13,81.51,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I72R D112Y G146S Y178H",4
"lib2","SARS-CoV-2","CCCAGTACAAGACGTA",6,191.92,6,-4.84,2,1.5,1.14,0,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","CCCAGTACACAATTCC",6,72.59,9.14,-1.69,0.07,2.5,1.06,0,">1 nonsynonymous","A14N Y39I N130R I142S S164K G174A",6
"lib2","SARS-CoV-2","CCCAGTACGAAAAGAA",1,8.32,10.75,-0.09,0.14,2.91,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCCAGTAGCCGGACCG",1,0.17,NA,NA,NA,NA,NA,NA,"stop","V11S S36E A145*",3
"lib2","SARS-CoV-2","CCCAGTATAAATACAC",3,29.64,6.35,-4.49,0.49,1.5,1.23,0.01,">1 nonsynonymous","L38T A89V",2
"lib2","SARS-CoV-2","CCCAGTATAACGTCCG",6,122.54,10.55,-0.29,0.03,2.95,1.06,0,">1 nonsynonymous","L5I L125F",2
"lib2","SARS-CoV-2","CCCAGTATGAAATTAT",1,31.93,6.3,-4.54,0.64,1.5,1.15,0.03,">1 nonsynonymous","T55I D68M S139A V173M",4
"lib2","SARS-CoV-2","CCCAGTATTAACTAAT",2,40.93,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","T55G Y91P N151S",3
"lib2","SARS-CoV-2","CCCAGTATTCAGTCAC",1,1.83,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","CCCAGTCAAAGACTAG",1,42.21,10.18,-0.65,0.05,2.97,1,0,">1 nonsynonymous","I2W G174E",2
"lib2","SARS-CoV-2","CCCAGTCAATCCCGAA",4,2.53,NA,NA,NA,NA,NA,NA,"stop","A14* S19P N40G Y91S N120E",5
"lib2","SARS-CoV-2","CCCAGTCCATATCTCA",4,0.89,NA,NA,NA,NA,NA,NA,"stop","V11L F17D S129* Y143E G166V",5
"lib2","SARS-CoV-2","CCCAGTCCTGTTAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","R25* S43V C61A K87D I104T",5
"lib2","SARS-CoV-2","CCCAGTCGAATCGAGA",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I N13I F44W G86D L95V S113Q E135I",7
"lib2","SARS-CoV-2","CCCAGTGACAACAAAA",10,141.93,10.59,-0.24,0.06,2.92,1.07,0,">1 nonsynonymous","L5K A105T",2
"lib2","SARS-CoV-2","CCCAGTGACTCATCCA",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85P V180S T201A",3
"lib2","SARS-CoV-2","CCCAGTGATGTTAACA",2,22.52,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F99R A105Y",2
"lib2","SARS-CoV-2","CCCAGTGTTCGCAGTT",5,508.04,9.57,-1.26,0.04,2.83,1.02,0,"1 nonsynonymous","Y165H",1
"lib2","SARS-CoV-2","CCCAGTTACTACCTAG",8,156.61,8.57,-2.27,0.09,2.81,1.11,0,">1 nonsynonymous","G146K F160M",2
"lib2","SARS-CoV-2","CCCAGTTATAAATCAG",9,39.83,6,-4.84,1.58,3,1.14,0,">1 nonsynonymous","F99T F185N K198Y",3
"lib2","SARS-CoV-2","CCCAGTTATCAACTAA",4,35.2,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","T55L I88D F167P",3
"lib2","SARS-CoV-2","CCCAGTTGAGCAACCA",7,32.74,9.3,-1.53,0.1,2.06,1.07,0,">1 nonsynonymous","I72V Y165R",2
"lib2","SARS-CoV-2","CCCAGTTTGACCAGCA",5,43.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73M D97L R136L L162P",4
"lib2","SARS-CoV-2","CCCATAAAAGAACAGG",1,19.54,9.5,-1.34,0.21,2.03,1.1,0.02,">1 nonsynonymous","C6L I138H",2
"lib2","SARS-CoV-2","CCCATAAAATATCGAG",10,55.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55P D98L Y121D N130M",4
"lib2","SARS-CoV-2","CCCATAAACACGATTG",2,50.41,10.78,-0.05,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCATAAACTGCAAGT",8,130.52,10.42,-0.41,0.04,2.79,1.05,0,">1 nonsynonymous","A42S D98I",2
"lib2","SARS-CoV-2","CCCATAAAGCCACGAG",1,21.51,8.18,-2.66,0.45,1.5,1.07,0.08,">1 nonsynonymous","Y35G D59A W106F N120H P149I",5
"lib2","SARS-CoV-2","CCCATAACACCCACAA",1,9.27,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","D90Y V103Q",2
"lib2","SARS-CoV-2","CCCATAAGAAAGCATT",9,20.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N58L I88G W106L E135S G146H",5
"lib2","SARS-CoV-2","CCCATAAGAAGCTAAT",10,88.15,10.06,-0.77,0.07,2.42,1.02,0,">1 nonsynonymous","A33L T55S V65W",3
"lib2","SARS-CoV-2","CCCATAAGCTGGCTTT",6,45.89,8.46,-2.38,0.18,1.5,1,0.01,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","CCCATAATTACTAACA",3,19.56,6,-4.84,2,2.66,1.11,0.01,">1 nonsynonymous","R25E E141C F156S",3
"lib2","SARS-CoV-2","CCCATAATTATTAAAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132Y",1
"lib2","SARS-CoV-2","CCCATACCGCGCGAGC",15,107.47,7.23,-3.6,0.25,1.5,1.14,0.01,">1 nonsynonymous","R27A P96Y",2
"lib2","SARS-CoV-2","CCCATACCTATATCAA",2,43.2,10.73,-0.11,0.07,3,1,0,"1 nonsynonymous","F8M",1
"lib2","SARS-CoV-2","CCCATACCTTAGAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S S41E P197M",3
"lib2","SARS-CoV-2","CCCATACGACGCCCTT",2,6.74,8.11,-2.73,0.3,1.92,1.09,0.01,">1 nonsynonymous","I28Q K87M L131I F160I",4
"lib2","SARS-CoV-2","CCCATACGCAATCCCA",7,148.46,10.32,-0.52,0.04,2.83,1.08,0,">1 nonsynonymous","T55I N64S I138P",3
"lib2","SARS-CoV-2","CCCATACGGACTCGAT",13,376.07,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F62P C158Y",2
"lib2","SARS-CoV-2","CCCATACGTCAGGTAA",1,1.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19V",1
"lib2","SARS-CoV-2","CCCATACGTTAACACT",2,23.26,10.22,-0.61,0.09,2.84,1.03,0,">1 nonsynonymous","G116M K132F",2
"lib2","SARS-CoV-2","CCCATACGTTAATTAC",3,26.29,8.96,-1.87,0.1,2.4,1,0,">1 nonsynonymous","N64T G83C N107D I138L",4
"lib2","SARS-CoV-2","CCCATAGAAACACCGT",2,34.92,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","F44M P96T Y121Q V173R",4
"lib2","SARS-CoV-2","CCCATAGACAACGCCT",11,68.74,9.43,-1.41,0.25,1.51,1.09,0.02,">1 nonsynonymous","L60I V77L W106T N120V",4
"lib2","SARS-CoV-2","CCCATAGATTAATCAT",2,45.83,10.32,-0.52,0.05,2.84,1.04,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","CCCATAGATTCAAAAT",11,61.65,8.7,-2.14,0.19,1.5,1.03,0.02,">1 nonsynonymous","I28P T100I",2
"lib2","SARS-CoV-2","CCCATAGCGATACTAT",5,32.02,9.91,-0.93,0.09,2.08,1.03,0,">1 nonsynonymous","I28V D59V D97I",3
"lib2","SARS-CoV-2","CCCATAGTCAGAATAA",5,213.75,10.69,-0.15,0.03,2.92,1.06,0,">1 nonsynonymous","I2P A14N",2
"lib2","SARS-CoV-2","CCCATAGTCCCAACCA",1,13.44,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E10K P54S N107I G155M G166L V194L",6
"lib2","SARS-CoV-2","CCCATATAAACGCTTA",3,4.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131F",1
"lib2","SARS-CoV-2","CCCATATATACACGCA",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q S19R Y50D Y93C S164M",5
"lib2","SARS-CoV-2","CCCATATCAAATGCTG",2,35.58,6,-4.83,1.22,1.5,1.15,0.03,">1 nonsynonymous","E76R G116F",2
"lib2","SARS-CoV-2","CCCATATCTCTAATCA",5,48.02,9.86,-0.98,0.08,2.5,1.09,0,">1 nonsynonymous","S41I A105V",2
"lib2","SARS-CoV-2","CCCATATGAGATACTG",3,12.46,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62S A81L Q168I A190D",4
"lib2","SARS-CoV-2","CCCATATGCTCACTTG",8,134.55,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S41T K48A T55I F62D N109G Q176S",6
"lib2","SARS-CoV-2","CCCATATTATCAATCG",4,130.62,9.74,-1.09,0.03,2.93,1.08,0,">1 nonsynonymous","C61T V115C",2
"lib2","SARS-CoV-2","CCCATATTCAGATGAT",4,52.79,8.38,-2.46,0.08,2.66,1.03,0,">1 nonsynonymous","N4V Y119T E135H G166Y",4
"lib2","SARS-CoV-2","CCCATCAAAAGGATAA",4,27.57,10.69,-0.14,0.11,2.81,1.07,0.01,">1 nonsynonymous","F47L K87H",2
"lib2","SARS-CoV-2","CCCATCAAAGACCTAA",2,6.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R P96C Y143I",3
"lib2","SARS-CoV-2","CCCATCAAGTAAAACG",1,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S W106E N171D",3
"lib2","SARS-CoV-2","CCCATCACTGTCCTCT",4,1.55,NA,NA,NA,NA,NA,NA,"stop","R27T S41* L60S",3
"lib2","SARS-CoV-2","CCCATCAGTTTAAGCG",5,38.13,10.93,0.09,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCATCCAATCAATGA",7,132.07,10.69,-0.15,0.03,2.99,1.02,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","CCCATCCATAGCTTAC",2,63.51,9.87,-0.97,0.05,2.23,1.05,0,">1 nonsynonymous","P7A F62D N120F",3
"lib2","SARS-CoV-2","CCCATCCCAATGATTG",6,108.43,10.16,-0.68,0.06,2.74,1.05,0,">1 nonsynonymous","K56S R136W",2
"lib2","SARS-CoV-2","CCCATCCCATAGATAA",6,54.21,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P7S N107Y R136I S164Y",4
"lib2","SARS-CoV-2","CCCATCCTTATGGAGT",15,811.01,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39G L57V D90H T100L G155C F167T Q176R A192C",8
"lib2","SARS-CoV-2","CCCATCGACCCAAGTG",2,40.55,6,-4.84,1.92,1.5,1.19,0.01,">1 nonsynonymous","S43W L57I P82I Y121E",4
"lib2","SARS-CoV-2","CCCATCTAAGCCAGGG",2,0.39,NA,NA,NA,NA,NA,NA,"stop","L5V I28Y V52* L95H T140W T170S",6
"lib2","SARS-CoV-2","CCCATCTAGGAAAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y119* A190E",2
"lib2","SARS-CoV-2","CCCATCTCAACCCAAA",3,118.77,8.18,-2.66,0.13,2.37,1.04,0.01,">1 nonsynonymous","R16Y K114Q N157W",3
"lib2","SARS-CoV-2","CCCATCTCAGAAATCA",1,5.57,6.28,-4.56,0.29,1.5,1,0,">1 nonsynonymous","G101K E135L G196C",3
"lib2","SARS-CoV-2","CCCATCTTTTTACATA",10,1.85,NA,NA,NA,NA,NA,NA,"stop","I2S T15F L57*",3
"lib2","SARS-CoV-2","CCCATGAAACCAAATA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","F17Y T55* Q176K L188*",4
"lib2","SARS-CoV-2","CCCATGAAATATTGAG",2,18.98,10.38,-0.46,0.1,2.86,1.08,0,"1 nonsynonymous","A14C",1
"lib2","SARS-CoV-2","CCCATGAACTGTTCTT",4,72.22,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","T15F S29T S45C D98R Q176M",5
"lib2","SARS-CoV-2","CCCATGAATCGTAATA",7,148.21,9.52,-1.31,0.09,2.76,1.1,0,">1 nonsynonymous","N64M N120T",2
"lib2","SARS-CoV-2","CCCATGACCTAACATT",1,25.66,10.52,-0.32,0.05,2.98,1.04,0,">1 nonsynonymous","G9D G83K G152V",3
"lib2","SARS-CoV-2","CCCATGACTGCGGTCT",11,236.36,8.19,-2.64,0.11,1.5,1.08,0,">1 nonsynonymous","I2V F44L Q176R",3
"lib2","SARS-CoV-2","CCCATGAGAGATAATC",12,1664.66,10.8,-0.04,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCATGAGTGCGTTAA",5,8.79,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N58D G86Q I104N R127Q",4
"lib2","SARS-CoV-2","CCCATGATAGAAAACT",2,41.18,7.66,-3.18,0.2,1.57,1.04,0.01,">1 nonsynonymous","E10S S113D",2
"lib2","SARS-CoV-2","CCCATGATTGTAAAAT",3,55.63,9.08,-1.76,0.05,2.92,1.06,0,">1 nonsynonymous","D97T G174I",2
"lib2","SARS-CoV-2","CCCATGCAAATGTCAT",2,5.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Y V71L F134Q P149H",4
"lib2","SARS-CoV-2","CCCATGCCAATTGAAG",11,101.33,6.08,-4.76,0.68,1.5,1.18,0.01,">1 nonsynonymous","L162R T170K G172V",3
"lib2","SARS-CoV-2","CCCATGCCTACTAGGC",3,23.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCCATGGATAGCATGC",7,32.74,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","F8L F62Y S69V P82G",4
"lib2","SARS-CoV-2","CCCATGGGGCGTGTGC",1,9.49,10.38,-0.45,0.07,2.85,1.16,0,">1 nonsynonymous","P7D K26M F44R",3
"lib2","SARS-CoV-2","CCCATGTGTTATCGAT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","A22E L38* A89W",3
"lib2","SARS-CoV-2","CCCATGTTTTATTAGA",4,133.55,10.74,-0.1,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCATTAAACACTAAT",8,138.21,10.79,-0.05,0.05,2.85,1.13,0,">1 nonsynonymous","Y35L L122A S139N",3
"lib2","SARS-CoV-2","CCCATTAAACATAACC",8,54.23,6.75,-4.09,0.22,1.5,1.12,0.01,">1 nonsynonymous","I28S T85R N171R K199I",4
"lib2","SARS-CoV-2","CCCATTAAAGGCCAAA",1,74.44,10.21,-0.62,0.07,2.65,1.08,0,">1 nonsynonymous","A14R Q84L",2
"lib2","SARS-CoV-2","CCCATTAACCCGTCCG",5,99.69,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N24K L122P K128L F167A",4
"lib2","SARS-CoV-2","CCCATTAACGTCAAGG",3,68.89,10.03,-0.81,0.07,2.65,1.06,0,">1 nonsynonymous","S29T G116H G152L H189S",4
"lib2","SARS-CoV-2","CCCATTACATCGCAAC",16,41.2,9.71,-1.13,0.13,2.39,1.08,0.01,">1 nonsynonymous","C31Y A42S D90A",3
"lib2","SARS-CoV-2","CCCATTAGAAAATCAG",8,38.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S L95S L122K",3
"lib2","SARS-CoV-2","CCCATTAGACGGCTCG",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40P V52N N58V R73H S139M F156V V181S",7
"lib2","SARS-CoV-2","CCCATTAGGAAAGGGC",2,14.08,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A14V N92L",2
"lib2","SARS-CoV-2","CCCATTATAAAAATTC",1,17.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2R C6T F12N F17Q K87G T100V",6
"lib2","SARS-CoV-2","CCCATTATAACAAAGC",5,72.1,9.41,-1.43,0.08,2.25,1.06,0,">1 nonsynonymous","W106T E154D",2
"lib2","SARS-CoV-2","CCCATTATACGATATA",7,167.56,10.26,-0.57,0.07,2.54,1,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CCCATTATGATGAACA",18,1815.79,10.74,-0.1,0.02,2.97,1.03,0,">1 nonsynonymous","R16S D90M P197Q",3
"lib2","SARS-CoV-2","CCCATTCAGCTGAACC",2,64.27,8.78,-2.06,0.07,2.44,1.09,0,">1 nonsynonymous","R16T S45C V65L Y143M",4
"lib2","SARS-CoV-2","CCCATTCATGAGATGC",18,64.84,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15N Y93D L122G G155N K198S",5
"lib2","SARS-CoV-2","CCCATTCTGTCTAACT",4,33.22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9E Y119V I138A C158A V173P",5
"lib2","SARS-CoV-2","CCCATTGACGGCTAAA",4,3.02,NA,NA,NA,NA,NA,NA,"stop","D34T R78* A89Q R124G S200*",5
"lib2","SARS-CoV-2","CCCATTGCTTAACCAA",4,64.87,10.72,-0.12,0.02,2.97,1,0,">1 nonsynonymous","T46L N151S",2
"lib2","SARS-CoV-2","CCCATTGTAGTTAAGG",14,144.64,10.83,-0.01,0.05,2.94,1.08,0,">1 nonsynonymous","Y39V E141H T201S",3
"lib2","SARS-CoV-2","CCCATTGTGATCATTA",1,9.51,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","L5N G86T K128H F156D",4
"lib2","SARS-CoV-2","CCCATTTACACTGAGA",1,20.95,10.63,-0.2,0.07,3,1.01,0,">1 nonsynonymous","R78L I138M",2
"lib2","SARS-CoV-2","CCCATTTATACAAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T F62S I88F G116H",4
"lib2","SARS-CoV-2","CCCATTTTAATGCGGT",10,317.77,9.28,-1.55,0.05,2.55,1.07,0,">1 nonsynonymous","E10N Y66L G174T",3
"lib2","SARS-CoV-2","CCCCAAAAAAAAGTTA",2,12.14,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F12P P133Y",2
"lib2","SARS-CoV-2","CCCCAAAAACTACTGT",13,254.89,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","P133A G172N T201N",3
"lib2","SARS-CoV-2","CCCCAAAAAGTGGGCT",7,50.93,10.51,-0.33,0.04,2.97,1.04,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","CCCCAAAAGAAAAACA",3,165.63,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S53Y Y66T C102V F167N V173T S184R",6
"lib2","SARS-CoV-2","CCCCAAAATAAGGCGA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","I2D S19* F44D",3
"lib2","SARS-CoV-2","CCCCAAACATTAAACA",1,14.44,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","I104E",1
"lib2","SARS-CoV-2","CCCCAAACCAGGCCCT",7,94.35,9.8,-1.04,0.08,2.13,1.06,0,">1 nonsynonymous","N1I N58I D90S A190S",4
"lib2","SARS-CoV-2","CCCCAAACTTGGCACA",6,13.14,6,-4.84,2,3,1.1,0,">1 nonsynonymous","P7L A33G A105R G155S Q168M",5
"lib2","SARS-CoV-2","CCCCAAAGAAAAAAGG",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A105I",2
"lib2","SARS-CoV-2","CCCCAAATAACTATGA",3,42.22,10.09,-0.74,0.07,2.84,1,0,">1 nonsynonymous","S36P I138A",2
"lib2","SARS-CoV-2","CCCCAAATCACACAAA",1,11.17,9.75,-1.08,0.13,2.11,1,0.01,">1 nonsynonymous","S36R D137E",2
"lib2","SARS-CoV-2","CCCCAACCACTATCCA",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P K128H",2
"lib2","SARS-CoV-2","CCCCAACCTACCAAAA",1,15.03,11.04,0.21,0.1,2.99,1.01,0,"1 nonsynonymous","S53E",1
"lib2","SARS-CoV-2","CCCCAACCTACCTTCA",1,4.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167V",1
"lib2","SARS-CoV-2","CCCCAACGGATATAGT",5,22.5,10.73,-0.11,0.06,3,1.01,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","CCCCAACTACATCCCA",3,15.96,10.9,0.06,0.08,2.97,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCAACTCATGTAAT",10,134.25,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D75W G86I R136N Y143P F160N",5
"lib2","SARS-CoV-2","CCCCAAGAGAATGAAT",2,10.55,7.72,-3.12,0.46,1.5,1.16,0.07,">1 nonsynonymous","F44A G86N",2
"lib2","SARS-CoV-2","CCCCAAGGAGTTGGAG",8,1.63,NA,NA,NA,NA,NA,NA,"stop","L125E G172*",2
"lib2","SARS-CoV-2","CCCCAAGTCGACCAGC",8,121.97,9.86,-0.97,0.06,2.8,1.04,0,">1 nonsynonymous","V77L E154D V173W",3
"lib2","SARS-CoV-2","CCCCAAGTTACAAAGG",6,0.76,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib2","SARS-CoV-2","CCCCAAGTTATAAGAA",2,11.48,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","P7L V37F T55H D112W N151M",5
"lib2","SARS-CoV-2","CCCCAATAACCACCCA",4,25.58,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V37T P54D N92R N120M",4
"lib2","SARS-CoV-2","CCCCAATAACCAGTTT",6,145.81,10.76,-0.08,0.07,2.89,1.13,0,"1 nonsynonymous","T148V",1
"lib2","SARS-CoV-2","CCCCAATAATGAGCGG",1,7.97,8.44,-2.4,0.2,2.11,1.05,0.02,">1 nonsynonymous","V20S A42S P191F T201A",4
"lib2","SARS-CoV-2","CCCCAATAGTATATCA",1,21.22,9.04,-1.79,0.09,2.85,1.16,0,">1 nonsynonymous","V11I Q168C",2
"lib2","SARS-CoV-2","CCCCAATCATTGTACT",5,61.88,10.35,-0.48,0.05,2.91,1.02,0,">1 nonsynonymous","T15G T140N A190M P197T",4
"lib2","SARS-CoV-2","CCCCAATGAAAGTCTA",4,10.94,6,-4.84,2,1.5,1.19,0.04,"1 nonsynonymous","I72G",1
"lib2","SARS-CoV-2","CCCCAATGCCTAACGG",8,113.03,10.06,-0.78,0.05,2.61,1.07,0,"1 nonsynonymous","R127H",1
"lib2","SARS-CoV-2","CCCCAATTCGTGAATC",5,140.36,10.83,-0.01,0.04,2.93,1.07,0,"1 nonsynonymous","R16H",1
"lib2","SARS-CoV-2","CCCCACAACCAGGAAT",2,107.91,9.61,-1.23,0.03,2.88,1.09,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","CCCCACAAGATACTCA",3,35.85,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R124P P149N",2
"lib2","SARS-CoV-2","CCCCACACCCATATTT",1,25.01,10.94,0.11,0.1,2.86,1.02,0,"1 nonsynonymous","H189V",1
"lib2","SARS-CoV-2","CCCCACACGCTTGTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6G Y35C F44N T55F N64K N130M T148*",7
"lib2","SARS-CoV-2","CCCCACACTTACCGTC",2,25.05,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G51F S113Y F134I T170I",4
"lib2","SARS-CoV-2","CCCCACATAATAGGAT",4,8.58,6,-4.84,2,1.5,1.05,0.03,">1 nonsynonymous","L38C C150F",2
"lib2","SARS-CoV-2","CCCCACATCTGACAGT",3,135.87,10.78,-0.06,0.06,2.8,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCACATGAAAACGA",1,15.97,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23K Q168L",2
"lib2","SARS-CoV-2","CCCCACATGCTCGCAT",13,27.9,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","S43V D97F N107H K132W",4
"lib2","SARS-CoV-2","CCCCACATTTCCACCA",4,61.54,6.25,-4.58,0.64,1.5,1.12,0.02,">1 nonsynonymous","G9M D98H N118L N157S",4
"lib2","SARS-CoV-2","CCCCACCAAACCCTTA",21,145.42,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N107V P161G",2
"lib2","SARS-CoV-2","CCCCACCAATCGCTCA",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142F G155F",2
"lib2","SARS-CoV-2","CCCCACCCAATGGAAT",7,80.83,7.82,-3.02,0.19,1.5,1.11,0.01,">1 nonsynonymous","W106L A145L",2
"lib2","SARS-CoV-2","CCCCACCCCTGCCATT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","G9A C49Y T55K L60* Y143G",5
"lib2","SARS-CoV-2","CCCCACCCTAGCTTAC",5,61.36,10.23,-0.6,0.06,2.83,1.08,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CCCCACGAGGACGTTA",5,26.77,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A14D L38Q W106M Y123S Q176N",5
"lib2","SARS-CoV-2","CCCCACGCGAGAACTA",3,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52D A89L N107S G116I",4
"lib2","SARS-CoV-2","CCCCACGGACCGTCAA",1,64.56,10.19,-0.65,0.05,2.85,1.02,0,"1 nonsynonymous","G155V",1
"lib2","SARS-CoV-2","CCCCACTACCACTATT",5,80.94,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F160M G174S Y178G",3
"lib2","SARS-CoV-2","CCCCACTTAGCATGAC",3,47.08,10.04,-0.8,0.07,2.57,1.11,0,"1 nonsynonymous","P133M",1
"lib2","SARS-CoV-2","CCCCAGAAAAATATGC",8,28.43,6.02,-4.81,0.81,1.5,1.12,0.01,">1 nonsynonymous","C49R T201Y",2
"lib2","SARS-CoV-2","CCCCAGAACTAAATGA",6,44.71,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A89C F99T V181L",3
"lib2","SARS-CoV-2","CCCCAGAAGAAAGTTA",2,6.64,8.57,-2.27,0.21,1.5,1,0.02,">1 nonsynonymous","A105S L131Y",2
"lib2","SARS-CoV-2","CCCCAGAATACACGGT",2,51.42,10.42,-0.41,0.05,2.86,1.12,0,">1 nonsynonymous","T55C I138Q",2
"lib2","SARS-CoV-2","CCCCAGACAACTACCG",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T D34I K87S",3
"lib2","SARS-CoV-2","CCCCAGACCTAATATC",2,28.08,10.82,-0.02,0.08,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCAGACTGTATAAA",7,142.84,10.25,-0.58,0.04,2.82,1.02,0,">1 nonsynonymous","S41P D98G",2
"lib2","SARS-CoV-2","CCCCAGAGATTTATAC",2,0.12,NA,NA,NA,NA,NA,NA,"stop","V37E F47L A67C R127* V173F",5
"lib2","SARS-CoV-2","CCCCAGATATCGCTAC",6,72.71,7.21,-3.63,0.2,1.5,1.16,0.01,">1 nonsynonymous","N4P F12I A33E G155F",4
"lib2","SARS-CoV-2","CCCCAGCAACCCCACG",8,155.73,10.6,-0.24,0.02,2.97,1.02,0,"1 nonsynonymous","F185Y",1
"lib2","SARS-CoV-2","CCCCAGCACGTCAATG",4,12.58,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L5R V37W T55P K94P",4
"lib2","SARS-CoV-2","CCCCAGCAGACCGAAC",6,66.96,7.76,-3.08,0.16,1.5,1.07,0.01,">1 nonsynonymous","T46V V115L Y165S",3
"lib2","SARS-CoV-2","CCCCAGCTAATAAGTC",7,17.47,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G51R V103K",2
"lib2","SARS-CoV-2","CCCCAGCTGCACGGGG",1,24.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40Y A105L",2
"lib2","SARS-CoV-2","CCCCAGGAAAGAAAAA",7,8.95,9.76,-1.08,0.37,1.5,1.08,0.08,">1 nonsynonymous","N13F A18T S53M N64H A105K",5
"lib2","SARS-CoV-2","CCCCAGGAAATAAATG",2,21.33,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","P96L F156R F185C",3
"lib2","SARS-CoV-2","CCCCAGTACTAAGTCC",6,7.58,NA,NA,NA,NA,NA,NA,"stop","Q84* N118S G155P P177L V181M",5
"lib2","SARS-CoV-2","CCCCAGTATAAAAACA",3,0.58,NA,NA,NA,NA,NA,NA,"stop","C6W F62S G166A S184*",4
"lib2","SARS-CoV-2","CCCCAGTCGGTACTTT",4,9.3,7.53,-3.3,0.26,1.5,1,0.03,">1 nonsynonymous","N130T L162G P197Q T201K",4
"lib2","SARS-CoV-2","CCCCAGTTATTAGACT",2,130.37,9.75,-1.09,0.09,2.61,1.03,0,">1 nonsynonymous","Y143H Y178S",2
"lib2","SARS-CoV-2","CCCCATAAACCAGTCC",1,51.15,10.64,-0.19,0.09,2.85,1.17,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","CCCCATAAAGTCAAAG",18,336.47,9.86,-0.98,0.05,2.62,1.03,0,">1 nonsynonymous","S36K K56A N107R",3
"lib2","SARS-CoV-2","CCCCATAAGTCACCAC",7,49.45,9.26,-1.58,0.11,1.99,1.16,0,">1 nonsynonymous","N107G Q144P",2
"lib2","SARS-CoV-2","CCCCATACAAAGAAGG",3,58.18,10.24,-0.59,0.05,2.86,1.05,0,">1 nonsynonymous","Y35I F44E T140R",3
"lib2","SARS-CoV-2","CCCCATACTAAACAGA",2,20.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4W Y93L E154H",3
"lib2","SARS-CoV-2","CCCCATACTAGGGCAA",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M A81I T100Y L162W",4
"lib2","SARS-CoV-2","CCCCATATCAGACGTT",7,171.82,10.24,-0.6,0.05,2.77,1.02,0,">1 nonsynonymous","T100Y L183V",2
"lib2","SARS-CoV-2","CCCCATCTCACATCAA",2,23.07,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S36N G83F K94L G152L C158S",5
"lib2","SARS-CoV-2","CCCCATCTCTTATAGA",5,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","CCCCATGTAGGGGCAA",2,71.79,10.21,-0.63,0.07,2.86,1.06,0,">1 nonsynonymous","F44Q T63K S129R A192D",4
"lib2","SARS-CoV-2","CCCCATGTCTATCCCT",8,153.5,10.76,-0.07,0.04,2.94,1.08,0,">1 nonsynonymous","Y35M S164M",2
"lib2","SARS-CoV-2","CCCCATTACCTGAAAT",20,127.52,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F12M D90H E135P Y143H C150T",5
"lib2","SARS-CoV-2","CCCCATTCAGCATTAT",6,125.75,8.84,-1.99,0.09,2.18,1.12,0,">1 nonsynonymous","A33P Y123A S129M G174P",4
"lib2","SARS-CoV-2","CCCCATTCCTAACTAT",8,2.07,NA,NA,NA,NA,NA,NA,"stop","Y39K T55V Y123* E135*",4
"lib2","SARS-CoV-2","CCCCATTCGAGTTAAT",3,17.6,10.9,0.07,0.08,2.99,1.03,0,"1 nonsynonymous","L60C",1
"lib2","SARS-CoV-2","CCCCATTTATAGAGTT",5,133.82,10.18,-0.66,0.04,2.89,1.07,0,">1 nonsynonymous","K94N N171S",2
"lib2","SARS-CoV-2","CCCCATTTCTAACTTA",5,52.2,9.36,-1.48,0.13,1.73,1.11,0.01,">1 nonsynonymous","G51P K128G",2
"lib2","SARS-CoV-2","CCCCCAAAACTCTACT",3,60.28,9.82,-1.02,0.08,2.34,1.03,0,">1 nonsynonymous","P54I L60T A105G S139N F160Y K198R",6
"lib2","SARS-CoV-2","CCCCCAAATATATGGC",3,92.21,10.1,-0.74,0.05,2.38,1.06,0,">1 nonsynonymous","D97T N130T P149R E186C",4
"lib2","SARS-CoV-2","CCCCCAAATGAAACCA",13,305.65,10.1,-0.74,0.05,2.54,1.03,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","CCCCCAACCACTTTCT",1,47.54,8.88,-1.95,0.19,1.5,1.05,0.01,">1 nonsynonymous","N109R R136G",2
"lib2","SARS-CoV-2","CCCCCAACGAACAAAC",17,272,9.6,-1.23,0.03,2.91,1.07,0,"1 nonsynonymous","F156C",1
"lib2","SARS-CoV-2","CCCCCAACGCAGGGTA",1,12.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141W Q176R",2
"lib2","SARS-CoV-2","CCCCCAACTGCTCACC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T55I N64F I88*",3
"lib2","SARS-CoV-2","CCCCCAACTGTCTAAA",3,74.45,9.57,-1.27,0.05,2.79,1.06,0,">1 nonsynonymous","D90R D98T Y119R",3
"lib2","SARS-CoV-2","CCCCCAAGTCCTATCT",2,3.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162Y",1
"lib2","SARS-CoV-2","CCCCCAATAATTAAAG",8,4.41,NA,NA,NA,NA,NA,NA,"stop","N1I C61P G86* T100D G116S P149H",6
"lib2","SARS-CoV-2","CCCCCAATACAATGAC",4,21.34,10.69,-0.15,0.07,2.91,1.05,0,">1 nonsynonymous","P149Y T201N",2
"lib2","SARS-CoV-2","CCCCCAATCCCCGACC",1,34.52,10.9,0.06,0.08,2.88,1.12,0,">1 nonsynonymous","K128P V173M",2
"lib2","SARS-CoV-2","CCCCCAATGTGTACTT",4,70.36,10.83,-0.01,0.07,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCCACACAGACATA",8,68.47,8.53,-2.31,0.08,2.24,1.1,0,">1 nonsynonymous","S45F G117T Q168Y",3
"lib2","SARS-CoV-2","CCCCCACCACCCAATA",6,36.46,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C49V C61L G74D",3
"lib2","SARS-CoV-2","CCCCCACTAACAACAT",2,14.01,6.08,-4.75,0.87,3,1.21,0.02,">1 nonsynonymous","G9M D90P I104K E141P P161F",5
"lib2","SARS-CoV-2","CCCCCACTTTCCGAAC",5,19.75,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6F V77E S139A S200P",4
"lib2","SARS-CoV-2","CCCCCAGAATAGGCAA",7,119.03,10.86,0.02,0.05,2.98,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCCCAGATAAAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S A67S Y165S",3
"lib2","SARS-CoV-2","CCCCCAGCGCGCGCGC",3,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L L122F",2
"lib2","SARS-CoV-2","CCCCCAGGACTGAAAT",2,39.06,10.85,0.01,0.07,2.97,1.07,0,"1 nonsynonymous","S147W",1
"lib2","SARS-CoV-2","CCCCCAGGGTCCTCGC",5,81.14,8.99,-1.84,0.07,2.64,1.06,0,">1 nonsynonymous","N1G G146M",2
"lib2","SARS-CoV-2","CCCCCAGTCTCGCCAA",2,6.05,10.53,-0.31,0.21,2.84,1.2,0.01,">1 nonsynonymous","R27K L60M P149F",3
"lib2","SARS-CoV-2","CCCCCAGTCTGCGAAA",12,189.64,10.63,-0.21,0.03,2.99,1.02,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","CCCCCAGTTCACTAAG",3,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T C49Y G86R P133A",4
"lib2","SARS-CoV-2","CCCCCATAACAGTCAT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","A14I L57S P96* L122M",4
"lib2","SARS-CoV-2","CCCCCATAACCCATCT",12,112.28,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V65T N92C F156S",3
"lib2","SARS-CoV-2","CCCCCATACCCCTACC",7,67.6,9.08,-1.75,0.13,1.6,1.1,0.01,">1 nonsynonymous","I2T T46P N64R",3
"lib2","SARS-CoV-2","CCCCCATTAATAGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N24* T100F S147T",3
"lib2","SARS-CoV-2","CCCCCCAACAGAAAAT",1,54.24,10.8,-0.03,0.03,3,1.02,0,"1 nonsynonymous","V153E",1
"lib2","SARS-CoV-2","CCCCCCAATAACCGTG",9,1.34,NA,NA,NA,NA,NA,NA,"stop","S43T T85* D90G G155L",4
"lib2","SARS-CoV-2","CCCCCCAGTGAATGCG",3,27.8,10.89,0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCCCATGCAGATAG",7,96.95,10.77,-0.07,0.04,2.94,1.07,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","CCCCCCATTCAGTGCT",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69G K87D V182Q",3
"lib2","SARS-CoV-2","CCCCCCATTCTTTTCG",1,31.55,10.52,-0.32,0.08,2.91,1,0,">1 nonsynonymous","R16L K132Y",2
"lib2","SARS-CoV-2","CCCCCCCGACTTCGTA",1,30.48,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I28K I72L Y121K Y143N",4
"lib2","SARS-CoV-2","CCCCCCGAATGGACAG",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89G S129E E154H",3
"lib2","SARS-CoV-2","CCCCCCGGGACCCCCC",1,31.87,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37W G83N K87R Y175I",4
"lib2","SARS-CoV-2","CCCCCCGTAGTCTATC",6,53.6,9.95,-0.89,0.1,2.21,1.03,0,">1 nonsynonymous","I28F P82R R136K K198S",4
"lib2","SARS-CoV-2","CCCCCCTCTCTCTGCA",6,93.42,9.46,-1.38,0.1,1.79,1.08,0,">1 nonsynonymous","R27C F47S",2
"lib2","SARS-CoV-2","CCCCCGAAAAAAACAT",5,53.42,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59R P82V S139I L162I",4
"lib2","SARS-CoV-2","CCCCCGACACAGATAT",9,68.2,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S41P C49Y W106R",3
"lib2","SARS-CoV-2","CCCCCGACTTAACTGT",1,14.66,10.85,0.01,0.15,2.92,1.03,0.01,">1 nonsynonymous","N64M N151A",2
"lib2","SARS-CoV-2","CCCCCGAGCAATCTAA",1,66.64,10.37,-0.46,0.05,2.8,1.1,0,">1 nonsynonymous","N40V A42D",2
"lib2","SARS-CoV-2","CCCCCGAGCTTTCGTA",1,17.38,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R16P S45C G101R",3
"lib2","SARS-CoV-2","CCCCCGATAGCATATT",4,7.66,9.47,-1.37,0.14,1.98,1,0.01,">1 nonsynonymous","D97Q L162Y L188M",3
"lib2","SARS-CoV-2","CCCCCGCGTCTCACTG",6,103.44,9.79,-1.05,0.07,2.72,1.06,0,">1 nonsynonymous","G116I S129P",2
"lib2","SARS-CoV-2","CCCCCGCTAGCAAAAC",3,34.91,6.35,-4.49,0.46,1.5,1.13,0.01,">1 nonsynonymous","D90V Y121E",2
"lib2","SARS-CoV-2","CCCCCGGATAATACTG",11,7.12,NA,NA,NA,NA,NA,NA,"stop","Y35* P177K",2
"lib2","SARS-CoV-2","CCCCCTACCTGCCGTA",5,40.65,10.59,-0.24,0.03,2.98,1.03,0,">1 nonsynonymous","R78L I138N",2
"lib2","SARS-CoV-2","CCCCCTAGATAACAAC",4,53.47,9.44,-1.4,0.1,1.91,1.16,0,">1 nonsynonymous","N13F E141W",2
"lib2","SARS-CoV-2","CCCCCTATGTACTAGA",12,71.18,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","P7T V103W",2
"lib2","SARS-CoV-2","CCCCCTCAGGGAACGT",10,111.42,8.13,-2.7,0.22,1.5,1.08,0.02,">1 nonsynonymous","Y21M S36V N109Q L122E",4
"lib2","SARS-CoV-2","CCCCCTCATTTAATTT",8,20.82,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D59S A81R K94I G101A",4
"lib2","SARS-CoV-2","CCCCCTCCAAGAGTAG",4,6.98,NA,NA,NA,NA,NA,NA,"stop","C6Y S36M T85N L95V K128P L188*",6
"lib2","SARS-CoV-2","CCCCCTCCGCTGTAAT",4,101.47,6.31,-4.53,0.64,1.5,1.12,0.03,">1 nonsynonymous","G83R R136S Y165S",3
"lib2","SARS-CoV-2","CCCCCTCCTGAGCAGC",1,14.69,6,-4.84,2,3,1.11,0.03,">1 nonsynonymous","T63E D68F P96L N157V",4
"lib2","SARS-CoV-2","CCCCCTCGGTCCGAAC",6,59.73,6,-4.84,1.69,1.5,1.14,0,">1 nonsynonymous","S113G N120T P161A P191T",4
"lib2","SARS-CoV-2","CCCCCTCTGGCTAAGT",8,85.08,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14W G86M",2
"lib2","SARS-CoV-2","CCCCCTCTTAAATTAA",3,122.01,8.42,-2.42,0.07,2.08,1.06,0,">1 nonsynonymous","N4Y V37R G146C",3
"lib2","SARS-CoV-2","CCCCCTGAGAACCGGT",5,29.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P7H L95Y T100R",3
"lib2","SARS-CoV-2","CCCCCTGAGACCTGCG",14,66.82,9.06,-1.78,0.18,1.85,1.18,0.01,">1 nonsynonymous","I2Y P96L Q168S",3
"lib2","SARS-CoV-2","CCCCCTGAGTGTGTGA",10,1.23,NA,NA,NA,NA,NA,NA,"stop","W23* V115A P161A",3
"lib2","SARS-CoV-2","CCCCCTTTCGCAGATT",4,22.92,10.65,-0.19,0.07,2.8,1.21,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CCCCGAAAATACAATA",10,134.84,9.5,-1.34,0.06,2.88,1.09,0,">1 nonsynonymous","I2P Y66L Y119F S129N",4
"lib2","SARS-CoV-2","CCCCGAAACGATTAAG",4,48.46,9.86,-0.97,0.05,2.85,1.1,0,">1 nonsynonymous","Y35L Y121S T201I",3
"lib2","SARS-CoV-2","CCCCGAACCCGTCCAC",1,67.05,6.09,-4.75,0.47,1.5,1.1,0.01,">1 nonsynonymous","N58R Y143C Y178R F185C",4
"lib2","SARS-CoV-2","CCCCGAACTAGTTGAA",3,37.92,10.99,0.16,0.09,2.88,1.12,0,">1 nonsynonymous","G9N V37S",2
"lib2","SARS-CoV-2","CCCCGAAGATGCCTAT",12,66.4,6,-4.84,1.09,1.5,1.15,0.02,">1 nonsynonymous","K26I L57Q Q84Y F126V",4
"lib2","SARS-CoV-2","CCCCGAAGGTATCAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","L5V Y35H I88G F134*",4
"lib2","SARS-CoV-2","CCCCGAATGGAACAAG",4,126.68,10.25,-0.59,0.03,2.85,1.02,0,"1 nonsynonymous","L57T",1
"lib2","SARS-CoV-2","CCCCGAATTGAACGGA",1,19.65,10.82,-0.02,0.11,2.83,1.16,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCCCGACACCAACTGG",7,74.56,10.8,-0.03,0.04,2.95,1.07,0,"1 nonsynonymous","S45E",1
"lib2","SARS-CoV-2","CCCCGACACTACCAAA",3,0.97,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","CCCCGACAGCATGCAA",4,71.55,9.22,-1.62,0.13,1.65,1.1,0.01,">1 nonsynonymous","Y50V F160V",2
"lib2","SARS-CoV-2","CCCCGACCAATGCCTG",2,19.58,10.64,-0.2,0.1,2.93,1.11,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCCCGACCGGTTCAAG",6,203.81,10.79,-0.05,0.04,2.94,1.06,0,">1 nonsynonymous","T85K I104L",2
"lib2","SARS-CoV-2","CCCCGAGGAGGCGAGC",7,0.83,NA,NA,NA,NA,NA,NA,"stop","W23V Q168*",2
"lib2","SARS-CoV-2","CCCCGAGTTTTGTATT",1,10.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6F S69K V77H",3
"lib2","SARS-CoV-2","CCCCGATCCGAATGCT",2,37.97,10.82,-0.02,0.09,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCGATCCTTAAACT",6,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K N40K I104R L131P Y143F G146E G152V",7
"lib2","SARS-CoV-2","CCCCGATTCAAGGGGC",2,18.14,7.01,-3.83,0.39,1.5,1,0.05,">1 nonsynonymous","G9C F44G C49F V71W Y119V L162T",6
"lib2","SARS-CoV-2","CCCCGCAAACCAGGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","D112* Y121K G166M",3
"lib2","SARS-CoV-2","CCCCGCAAATGGTACA",1,38.48,8.78,-2.06,0.17,2.47,1.11,0.01,"1 nonsynonymous","N107H",1
"lib2","SARS-CoV-2","CCCCGCAATCTCTCAA",4,135.75,10.66,-0.17,0.04,2.93,1.05,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","CCCCGCAATTCCTATA",3,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","CCCCGCCCTACTTCGA",3,62.14,10.41,-0.43,0.07,2.83,1.01,0,">1 nonsynonymous","R16A R27V R136L",3
"lib2","SARS-CoV-2","CCCCGCCGAAAGTTTG",7,49.01,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A14T N58Y G86S N107S",4
"lib2","SARS-CoV-2","CCCCGCCTATTGAATT",6,3.43,NA,NA,NA,NA,NA,NA,"stop","R27I N30L S43R N120F N151V Y175*",6
"lib2","SARS-CoV-2","CCCCGCGACACAGGGC",5,47.51,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N1M D34G Y50P N92L Y165L",5
"lib2","SARS-CoV-2","CCCCGCTTACAAAAAC",2,30.95,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T3L R27W C61R D98Y P161V",5
"lib2","SARS-CoV-2","CCCCGGACAAGCCCAC",1,4.31,NA,NA,NA,NA,NA,NA,"stop","K26* C61P D90L D137Y",4
"lib2","SARS-CoV-2","CCCCGGGAAAATTCTA",11,101.28,6,-4.84,1.3,1.5,1.13,0.01,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","CCCCGGTAAATCCATA",7,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A R27M A33R D59N G83D L95Y K128F",7
"lib2","SARS-CoV-2","CCCCGGTCTTCAGCAA",1,11.37,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","R25A F44Y N130S P149M R179C",5
"lib2","SARS-CoV-2","CCCCGGTTAATATTTG",3,8.21,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D112I C150N",2
"lib2","SARS-CoV-2","CCCCGTAATGAGTGAA",1,17.71,8.73,-2.1,0.14,1.5,1,0.01,">1 nonsynonymous","G86E F160R",2
"lib2","SARS-CoV-2","CCCCGTACGCTTTCTA",5,27.05,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T15Y R25G N64C I138G",4
"lib2","SARS-CoV-2","CCCCGTATATTGACAC",4,33.1,10.36,-0.47,0.1,2.49,1.08,0.01,">1 nonsynonymous","S41N V77I D98T P133T",4
"lib2","SARS-CoV-2","CCCCGTATCAAAACAA",6,52.55,9.6,-1.23,0.11,1.96,1.07,0.01,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","CCCCGTCACAGCCACG",7,106.59,10.82,-0.02,0.04,2.92,1.08,0,"1 nonsynonymous","T3A",1
"lib2","SARS-CoV-2","CCCCGTCACTTATCCT",5,61.88,9.07,-1.77,0.05,2.98,1.06,0,">1 nonsynonymous","Y119M G152H",2
"lib2","SARS-CoV-2","CCCCGTCGGCCGGTGC",4,129.37,7.64,-3.19,0.11,1.5,1.06,0,">1 nonsynonymous","L5W Y35L G83L S113H T170H",5
"lib2","SARS-CoV-2","CCCCGTGCATCAGTAC",4,36.45,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D68C Y93Q Y121T F167K",4
"lib2","SARS-CoV-2","CCCCGTTATATCTTGG",7,35.68,6,-4.84,2,3,1.2,0,">1 nonsynonymous","D34Y V71W",2
"lib2","SARS-CoV-2","CCCCGTTCAGACGTCA",6,23.12,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","A14L D34R S43R Y50W D90S F99S",6
"lib2","SARS-CoV-2","CCCCTAAAACAAATCA",13,66.18,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N1M G101P P161S",3
"lib2","SARS-CoV-2","CCCCTAACTACAACCG",2,11.06,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T85S K94I P133Y T201P",4
"lib2","SARS-CoV-2","CCCCTAAGCCTATATG",13,0.17,NA,NA,NA,NA,NA,NA,"stop","Y21H T55F G152*",3
"lib2","SARS-CoV-2","CCCCTAAGCTAAAATA",3,14.86,8.92,-1.92,0.07,3,1.05,0,"1 nonsynonymous","N157E",1
"lib2","SARS-CoV-2","CCCCTAATAGTTTACA",6,230.92,10.42,-0.42,0.03,2.83,1.06,0,">1 nonsynonymous","K56F D90K Y178H",3
"lib2","SARS-CoV-2","CCCCTAATCAATTCAT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","A81T L95I P133*",3
"lib2","SARS-CoV-2","CCCCTAATCCCCAGCG",4,46.21,6.5,-4.34,0.4,1.5,1.12,0.01,">1 nonsynonymous","A89E D97T",2
"lib2","SARS-CoV-2","CCCCTAATGATGGTAG",7,59.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R27G C150Y E154A",3
"lib2","SARS-CoV-2","CCCCTACACTAAGTCC",21,178.97,8.14,-2.7,0.17,1.92,1.11,0.01,">1 nonsynonymous","G74K K114A E141C Q168S",4
"lib2","SARS-CoV-2","CCCCTACATAAGTGTT",7,81.14,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5S Y35Q G51R N157E G174V",5
"lib2","SARS-CoV-2","CCCCTACGACCGAGAT",4,25.55,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44P Y91R E141D G152R P161R V173Y",6
"lib2","SARS-CoV-2","CCCCTACTCCGTGAAC",6,79.9,8.46,-2.38,0.11,1.97,1.08,0,">1 nonsynonymous","I2L N107I",2
"lib2","SARS-CoV-2","CCCCTAGCGGTTCCAT",4,47.64,10.8,-0.04,0.07,2.92,1.01,0,"1 nonsynonymous","S147F",1
"lib2","SARS-CoV-2","CCCCTAGCTATTTTAT",1,10.15,9.62,-1.22,0.16,2.92,1.1,0.02,"1 nonsynonymous","G116P",1
"lib2","SARS-CoV-2","CCCCTAGGACATTAGA",15,126.8,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","I88K G174Y",2
"lib2","SARS-CoV-2","CCCCTAGGTCACTCTT",2,110.12,10.2,-0.64,0.03,2.82,1.07,0,">1 nonsynonymous","S19G Q168A",2
"lib2","SARS-CoV-2","CCCCTAGTAGTCCCCA",1,2.97,NA,NA,NA,NA,NA,NA,"stop","S43* A89Q R136L P149S V181C",5
"lib2","SARS-CoV-2","CCCCTATCACAGGGAA",3,73,10.95,0.11,0.05,2.97,1.05,0,"1 nonsynonymous","Y39M",1
"lib2","SARS-CoV-2","CCCCTATCGACTAAGC",8,42.18,6.05,-4.78,1.06,1.5,1.16,0.02,">1 nonsynonymous","N40K G86P Y119G S129H P149L",5
"lib2","SARS-CoV-2","CCCCTATGCAATAAAG",3,0.63,NA,NA,NA,NA,NA,NA,"stop","T15C L38R F62P D97I V180T C195*",6
"lib2","SARS-CoV-2","CCCCTATTATGGGAAG",7,2.93,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCCCTATTCCGACACT",2,13.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16K Q79R E135G V181S",4
"lib2","SARS-CoV-2","CCCCTCAACCATGCCT",1,60.6,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","R25S N120S K128V Y143P",4
"lib2","SARS-CoV-2","CCCCTCAACCGTCCCT",3,8.71,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","R124P D137T Y143V",3
"lib2","SARS-CoV-2","CCCCTCAACTTAAGGC",1,17.21,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","F12R V37R Q79M Y121N",4
"lib2","SARS-CoV-2","CCCCTCAAGTCCGGGC",3,27.3,10.81,-0.02,0.04,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCCTCAAGTTTTCGT",2,24.15,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25D L38Y L60R S129I L162V",5
"lib2","SARS-CoV-2","CCCCTCAGAATACCCA",8,54.26,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S29K N64G F99E I104Y",4
"lib2","SARS-CoV-2","CCCCTCAGACTTACTA",17,246.57,10.6,-0.24,0.03,2.95,1.04,0,">1 nonsynonymous","A42R L57F",2
"lib2","SARS-CoV-2","CCCCTCAGATTAAAAA",7,32.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y V77R I88S G116K",4
"lib2","SARS-CoV-2","CCCCTCAGTTCTTGAC",10,39.57,8.35,-2.49,0.17,1.5,1.07,0.01,">1 nonsynonymous","S69G I104L A145G",3
"lib2","SARS-CoV-2","CCCCTCATCGTTGACT",14,185.18,9.39,-1.44,0.06,2.77,1.07,0,">1 nonsynonymous","V37C N118V",2
"lib2","SARS-CoV-2","CCCCTCATTAGAGAGC",7,12.52,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G101N N151P",2
"lib2","SARS-CoV-2","CCCCTCCAATGAGTAC",4,7.53,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","C6N D90N N109C V115D S139A R179L",6
"lib2","SARS-CoV-2","CCCCTCCAGAACAAAG",4,42.57,10.78,-0.06,0.03,2.95,1.06,0,">1 nonsynonymous","I2T N151R",2
"lib2","SARS-CoV-2","CCCCTCCAGTGTTTTG",9,189.35,10.25,-0.59,0.02,2.93,1.08,0,">1 nonsynonymous","Y39L F62L L125A",3
"lib2","SARS-CoV-2","CCCCTCCCAGGCGCAT",16,245.86,8.84,-2,0.07,2.92,1.09,0,">1 nonsynonymous","I2L E10S V37L G166M",4
"lib2","SARS-CoV-2","CCCCTCCTAATACCTA",6,76.75,9.65,-1.19,0.09,1.97,1.08,0,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","CCCCTCGATAATCAGG",3,2.71,NA,NA,NA,NA,NA,NA,"stop","R16I C102L Y178*",3
"lib2","SARS-CoV-2","CCCCTCGGAAATGATT",2,0.75,NA,NA,NA,NA,NA,NA,"stop","I28* S139T",2
"lib2","SARS-CoV-2","CCCCTCGGACCTTTGA",1,11.36,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S41L N92P S113P P161Q",4
"lib2","SARS-CoV-2","CCCCTCGGGCTGCAAT",13,249.38,8.76,-2.08,0.08,2.15,1.11,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","CCCCTCGTCCGGGTCC",4,0,NA,NA,NA,NA,NA,NA,"stop","C31K L38R D59* S184I K199D",5
"lib2","SARS-CoV-2","CCCCTCGTGGACATAA",4,36.05,10.9,0.06,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCTCGTGGATAGTC",4,71.64,10.86,0.02,0.02,2.94,1.07,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","CCCCTCTAGAGCCTAT",2,8.31,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","C6N Y35R Y93H N120I A190N",5
"lib2","SARS-CoV-2","CCCCTCTCAACTGCGA",2,44.8,10.1,-0.74,0.04,2.78,1.05,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","CCCCTCTTTAACATGG",8,104.3,8.31,-2.52,0.24,1.5,1.07,0.02,">1 nonsynonymous","S69V K114L P149A",3
"lib2","SARS-CoV-2","CCCCTGAATAAACGGG",3,12.28,9.02,-1.81,0.1,2.91,1.01,0,">1 nonsynonymous","K94R F156D",2
"lib2","SARS-CoV-2","CCCCTGAATATTTTAC",9,197.75,10.66,-0.17,0.03,2.89,1.1,0,">1 nonsynonymous","K26Q A42G K128R E141S A190E",5
"lib2","SARS-CoV-2","CCCCTGATGATAGTAT",3,47.57,9.98,-0.86,0.06,2.44,1.06,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","CCCCTGATTTAGACCT",10,91.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T F8T D59G Y91L Q144M",5
"lib2","SARS-CoV-2","CCCCTGCAAAGAAAAG",6,396.82,10.2,-0.64,0.03,2.96,1.04,0,">1 nonsynonymous","L5Q Y123R V173D",3
"lib2","SARS-CoV-2","CCCCTGCCGAGAATAT",2,26.09,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","I28W S41R G86L",3
"lib2","SARS-CoV-2","CCCCTGCCTAAAAGAT",15,257.96,9.68,-1.15,0.06,2.27,1.05,0,">1 nonsynonymous","R16S L162Y",2
"lib2","SARS-CoV-2","CCCCTGCTGCCCACGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I A14F A105S",3
"lib2","SARS-CoV-2","CCCCTGGAAAGCCTAA",6,60.54,10.87,0.04,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCTGGCACAAGATT",9,1,NA,NA,NA,NA,NA,NA,"stop","S43Y G51W L57* D68K",4
"lib2","SARS-CoV-2","CCCCTGGGTAGTATAA",3,35.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G101R W106S K128I Y165M",4
"lib2","SARS-CoV-2","CCCCTGTAAAGTTAAA",5,104.53,10.79,-0.04,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCCTGTCACACACTG",2,32.3,10.39,-0.45,0.07,2.87,1.14,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","CCCCTGTTAGAAGATA",5,16.16,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S43G R73S Y93P Y121I G152L K199N",6
"lib2","SARS-CoV-2","CCCCTTAATAGTTGAA",7,133.15,10.15,-0.68,0.04,2.72,1.03,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","CCCCTTAATGGGAGAA",6,1.2,NA,NA,NA,NA,NA,NA,"stop","K87* W106P",2
"lib2","SARS-CoV-2","CCCCTTAATTGCAGGA",4,40.06,8.71,-2.12,0.18,1.5,1.08,0.02,">1 nonsynonymous","G51S F99Y S200R",3
"lib2","SARS-CoV-2","CCCCTTAATTGCTTTG",7,63.77,8.16,-2.68,0.25,1.5,1.13,0.02,">1 nonsynonymous","S53A K87Q R136G",3
"lib2","SARS-CoV-2","CCCCTTATATGCATAA",9,51.88,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","E10S V20R L38T F70H F99L R124H S129T E141G C150N",9
"lib2","SARS-CoV-2","CCCCTTCAACTTGTCC",4,59.15,10.11,-0.72,0.06,2.94,1.08,0,">1 nonsynonymous","V37I Y119R",2
"lib2","SARS-CoV-2","CCCCTTCAGCCAAACT",3,23.47,6,-4.84,1.46,1.5,1.06,0,">1 nonsynonymous","D112C G146L C158T",3
"lib2","SARS-CoV-2","CCCCTTCCAAAGCCTA",7,198.42,10.85,0.02,0.06,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCCTTCTGCACTTCA",7,4.38,NA,NA,NA,NA,NA,NA,"stop","P7T V20A I88S Y119*",4
"lib2","SARS-CoV-2","CCCCTTTAAAAATTAA",1,7.62,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","S45T P96V V103L C195P",4
"lib2","SARS-CoV-2","CCCCTTTTTAGGCCTT",16,33.78,6.47,-4.36,0.65,1.5,1.09,0.04,">1 nonsynonymous","C49Q C61S V71E I88K N118Q T201Q",6
"lib2","SARS-CoV-2","CCCGAAAAACTAAACG",6,0.68,NA,NA,NA,NA,NA,NA,"stop","A42* T63A K87C V103S",4
"lib2","SARS-CoV-2","CCCGAAAAAGGAACGT",1,45.82,10.93,0.1,0.07,2.85,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCGAAACAGTATGTA",3,85.01,10.36,-0.47,0.05,2.94,1.08,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","CCCGAAAGACCTTATA",5,31.46,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F12S S19Y F62H A89S N107C",5
"lib2","SARS-CoV-2","CCCGAAAGCCTGATAC",8,21.9,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N24P A33M F99V L162V",4
"lib2","SARS-CoV-2","CCCGAAAGGTTAATAC",4,27.17,9.12,-1.72,0.13,2.29,1.18,0.01,">1 nonsynonymous","L5R S43P N107D",3
"lib2","SARS-CoV-2","CCCGAAAGTACATTCA",5,78.82,7.19,-3.64,0.19,1.66,1.1,0.01,">1 nonsynonymous","C150Y P191N",2
"lib2","SARS-CoV-2","CCCGAAAGTTCCCCTC",9,47.59,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","F44L V103A D137V",3
"lib2","SARS-CoV-2","CCCGAAATATAGCCAT",2,68.92,10.3,-0.53,0.05,2.92,1.11,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","CCCGAAATCACAAGTG",1,68.34,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y121F E154L F160M Y175K",4
"lib2","SARS-CoV-2","CCCGAAATCATCAAAG",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A P96L S113M F156S",4
"lib2","SARS-CoV-2","CCCGAAATCATGTCAC",7,102.91,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T85A S113P A145G Q168I",4
"lib2","SARS-CoV-2","CCCGAAATCGCGAGGT",3,85.19,7.99,-2.84,0.16,1.99,1.06,0.01,">1 nonsynonymous","Y119V F185H",2
"lib2","SARS-CoV-2","CCCGAAATTCCGAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39S Y50* V77T N107D V115P",5
"lib2","SARS-CoV-2","CCCGAAATTGTCAACC",2,45.12,10.7,-0.14,0.03,2.97,1.05,0,">1 nonsynonymous","D98E S129H",2
"lib2","SARS-CoV-2","CCCGAAATTTCCGAGG",2,27.67,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y93H G166F",2
"lib2","SARS-CoV-2","CCCGAAATTTTCTTAG",4,34.78,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D68K E135S",2
"lib2","SARS-CoV-2","CCCGAACAGCACGCCG",6,110.51,9.76,-1.08,0.07,1.94,1.04,0,">1 nonsynonymous","L5S R27L N107S P149H L188V",5
"lib2","SARS-CoV-2","CCCGAACATAACAGCT",2,43.72,10.68,-0.15,0.07,2.91,1.07,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","CCCGAACCAATGAAAT",2,11.07,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K87F Y121K L162A",3
"lib2","SARS-CoV-2","CCCGAACCAGACAACA",3,38.19,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","G172I",1
"lib2","SARS-CoV-2","CCCGAACCCATGTGTA",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E I88A E141M P197T",4
"lib2","SARS-CoV-2","CCCGAACCGGAATCTC",12,133.46,10.86,0.02,0.03,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCGAACGAACGTGTT",1,9.98,10.57,-0.27,0.13,2.81,1.19,0.01,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","CCCGAACGTATGACCT",10,49.22,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","Y50T W106E N151Y",3
"lib2","SARS-CoV-2","CCCGAACGTCACACAT",9,118.86,9.82,-1.01,0.06,2.14,1.05,0,">1 nonsynonymous","A14I I80L",2
"lib2","SARS-CoV-2","CCCGAACTAGATATAC",2,31.18,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y91A D112C",2
"lib2","SARS-CoV-2","CCCGAAGATGGAAAAT",5,25,8.81,-2.03,0.15,1.75,1.13,0.01,">1 nonsynonymous","S41H Y91V S139K T201S",4
"lib2","SARS-CoV-2","CCCGAAGCAAACGACT",2,13.29,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","N64T V103N N120L",3
"lib2","SARS-CoV-2","CCCGAAGGAATGAGAA",7,1.61,NA,NA,NA,NA,NA,NA,"stop","P7T N64T K87I Y119* Q176K",5
"lib2","SARS-CoV-2","CCCGAAGGGGCAGTCA",1,0.58,NA,NA,NA,NA,NA,NA,"stop","A89* D98V K132D",3
"lib2","SARS-CoV-2","CCCGAATAAACCGCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y V37R G101D Q163I",4
"lib2","SARS-CoV-2","CCCGAATGTCAGGAAC",1,9.43,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S45I D112K V194A",3
"lib2","SARS-CoV-2","CCCGAATTCCTGACAA",7,0.96,NA,NA,NA,NA,NA,NA,"stop","S43* V77R K128S E186S",4
"lib2","SARS-CoV-2","CCCGAATTTCAAACCG",4,51.78,9.8,-1.04,0.04,2.95,1.06,0,">1 nonsynonymous","N4M K87E Q168F",3
"lib2","SARS-CoV-2","CCCGAATTTTGGGCCT",11,294.88,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y39T Q176P",2
"lib2","SARS-CoV-2","CCCGACAAAACAAATT",11,98.33,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F70N A89V D98S K132D P197S",5
"lib2","SARS-CoV-2","CCCGACAAATGTCAGG",5,77.72,10.81,-0.03,0.02,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCGACAAGAGCTCCC",5,135.18,8.09,-2.74,0.15,2.3,1.09,0.01,">1 nonsynonymous","Y175K T201S",2
"lib2","SARS-CoV-2","CCCGACAAGCTGGTGA",2,51.59,6,-4.84,1.36,2.84,1.19,0,">1 nonsynonymous","L5P A33R S41T T100N N118S Y143S V181C",7
"lib2","SARS-CoV-2","CCCGACACTTCTCGTC",6,0.14,NA,NA,NA,NA,NA,NA,"stop","C31D N110* Y123W T148C P161N R179I",6
"lib2","SARS-CoV-2","CCCGACAGACAGAAAG",2,10.72,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48A S113T L125S I142Y G174P",5
"lib2","SARS-CoV-2","CCCGACCCATTCGAAA",2,55.94,10.84,0,0.06,2.96,1.07,0,"1 nonsynonymous","V115P",1
"lib2","SARS-CoV-2","CCCGACCTAGAGCAGC",12,36.29,9.39,-1.44,0.1,2.06,1,0,">1 nonsynonymous","F8C P54S",2
"lib2","SARS-CoV-2","CCCGACGAGCTACATC",4,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92G A105C G116Y",3
"lib2","SARS-CoV-2","CCCGACGAGGCCACTT",8,70.37,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T100S G117V A145P G152S",4
"lib2","SARS-CoV-2","CCCGACGATACTCTAA",2,72.16,10.72,-0.12,0.04,2.94,1.04,0,">1 nonsynonymous","F62M F160P",2
"lib2","SARS-CoV-2","CCCGACTACAAAGACA",7,91.9,9.28,-1.55,0.08,1.95,1.07,0,">1 nonsynonymous","D137V F160W",2
"lib2","SARS-CoV-2","CCCGACTACTGTCACT",8,85.59,10.71,-0.12,0.03,2.98,1.02,0,">1 nonsynonymous","G51K L122T I142V",3
"lib2","SARS-CoV-2","CCCGACTGAACGGCCA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","N64K G166*",2
"lib2","SARS-CoV-2","CCCGACTTTCACCAGG",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N S36Q C49P Y91S C150I L183S",6
"lib2","SARS-CoV-2","CCCGACTTTCGATGAA",1,15.99,6,-4.84,2,3,1.41,0.03,">1 nonsynonymous","F62L I88E C150L F167W",4
"lib2","SARS-CoV-2","CCCGACTTTGCATGCG",12,70.39,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I88T G101D S184R",3
"lib2","SARS-CoV-2","CCCGAGACCATAGGTT",7,128.08,10.85,0.01,0.07,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCGAGACGCGAATGT",3,13.22,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C61R R73G D97H I138Y P197K",5
"lib2","SARS-CoV-2","CCCGAGAGGAATTAAC",4,0.23,NA,NA,NA,NA,NA,NA,"stop","C61G T85K L95* G101P N109M N130R",6
"lib2","SARS-CoV-2","CCCGAGATTAGTCACA",6,4.65,NA,NA,NA,NA,NA,NA,"stop","D34H S45* K87Q P161D Y175I",5
"lib2","SARS-CoV-2","CCCGAGCGACTGAAAT",3,48.35,10.46,-0.38,0.04,2.91,1.09,0,">1 nonsynonymous","T85S S147Q E154M",3
"lib2","SARS-CoV-2","CCCGAGCTTACACTTT",3,30.26,10.57,-0.27,0.07,2.87,1.06,0,"1 nonsynonymous","A18M",1
"lib2","SARS-CoV-2","CCCGAGGTCACTATTT",1,49.51,9.84,-1,0.04,2.88,1.12,0,">1 nonsynonymous","A89S P169A",2
"lib2","SARS-CoV-2","CCCGATAAACCGCATG",9,213.36,10.19,-0.65,0.01,2.94,1.06,0,">1 nonsynonymous","Y119R S200M",2
"lib2","SARS-CoV-2","CCCGATACCACGAGTC",2,37.62,9.89,-0.95,0.11,2.05,1,0,"1 nonsynonymous","F8D",1
"lib2","SARS-CoV-2","CCCGATAGGAGAAACA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","A14F Y35R D97* P191I",4
"lib2","SARS-CoV-2","CCCGATAGTTGATTCG",4,35.31,8.67,-2.16,0.16,1.71,1.03,0.01,">1 nonsynonymous","G86K D90N",2
"lib2","SARS-CoV-2","CCCGATATAATCATTC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","P7L L125*",2
"lib2","SARS-CoV-2","CCCGATATTGCCATCA",8,111.06,10.54,-0.3,0.04,2.94,1.03,0,"1 nonsynonymous","T15G",1
"lib2","SARS-CoV-2","CCCGATCAACATTAAT",6,141.82,10.34,-0.5,0.03,2.89,1.05,0,">1 nonsynonymous","L38W S43P",2
"lib2","SARS-CoV-2","CCCGATCACCCTGTTA",2,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R G9R G83F L95W A190P",5
"lib2","SARS-CoV-2","CCCGATCACTGTACAA",4,45.54,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S41W A105G G172Q K199G",4
"lib2","SARS-CoV-2","CCCGATCACTGTTAAC",2,15.76,10.12,-0.72,0.08,2.83,1,0,">1 nonsynonymous","A14S F44P",2
"lib2","SARS-CoV-2","CCCGATCATTACCAGT",4,61.49,10.32,-0.52,0.04,2.99,1,0,">1 nonsynonymous","E10S C61L V153Y",3
"lib2","SARS-CoV-2","CCCGATGCATTTACTA",23,305.73,9.09,-1.75,0.06,2.25,1.09,0,">1 nonsynonymous","Y121H G155I K199Q",3
"lib2","SARS-CoV-2","CCCGATGCTATAATTA",1,24.85,6,-4.84,2,3,1.12,0.02,">1 nonsynonymous","S45N Y50S G146C N151F P161V",5
"lib2","SARS-CoV-2","CCCGATTCCCGCGCCA",3,105.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6A R16F F99S",3
"lib2","SARS-CoV-2","CCCGATTTAAATGTTA",12,95.32,7.25,-3.59,0.17,1.5,1.12,0.01,">1 nonsynonymous","G9R G86Y",2
"lib2","SARS-CoV-2","CCCGATTTCCTTAATT",1,115.71,10.24,-0.59,0.02,2.95,1.03,0,"1 nonsynonymous","Q176M",1
"lib2","SARS-CoV-2","CCCGCAAAAAACACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G83T T201*",2
"lib2","SARS-CoV-2","CCCGCAAACCACATAA",4,22.55,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V103S S129G Q163L",3
"lib2","SARS-CoV-2","CCCGCAAATGATTAAA",8,23.07,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D98A V103K S129M",3
"lib2","SARS-CoV-2","CCCGCAACAGTGGACA",4,63.5,10.07,-0.77,0.01,2.93,1.07,0,"1 nonsynonymous","N118T",1
"lib2","SARS-CoV-2","CCCGCAACCCTAACAA",3,13.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43L T46D P161Y",3
"lib2","SARS-CoV-2","CCCGCAAGCATATTCA",9,87.2,10.29,-0.54,0.04,2.86,1,0,">1 nonsynonymous","R136L H189L",2
"lib2","SARS-CoV-2","CCCGCAAGTCAAACGA",7,128.22,10.8,-0.04,0.03,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCGCAATGATCTCTA",7,53.65,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12H D90K S113K T140M P149H T201P",6
"lib2","SARS-CoV-2","CCCGCAATTAACCAAA",8,71.27,8.1,-2.74,0.09,2.61,1.09,0,">1 nonsynonymous","C61A K114P G166L",3
"lib2","SARS-CoV-2","CCCGCAATTAGCACCA",4,12.91,8.75,-2.09,0.12,2.16,1,0.01,">1 nonsynonymous","T15I I142K",2
"lib2","SARS-CoV-2","CCCGCAATTTTACTAG",3,88.32,10.72,-0.11,0.04,2.89,1.1,0,">1 nonsynonymous","T55K T100L G116H",3
"lib2","SARS-CoV-2","CCCGCACAACGAAACT",10,120.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G I28G F44I D98N N120F R127K T140R T201S",8
"lib2","SARS-CoV-2","CCCGCACAAGAACATT",11,125.94,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y39W E135L C158P",3
"lib2","SARS-CoV-2","CCCGCACAAGAATCTG",3,43.72,10.27,-0.56,0.05,2.85,1.09,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","CCCGCACACATGATCA",11,89.5,6,-4.84,2,3,1.24,0,">1 nonsynonymous","P82N N151P",2
"lib2","SARS-CoV-2","CCCGCACCGACGCGCA",3,85.12,10.24,-0.6,0.05,2.99,1.05,0,">1 nonsynonymous","C61H K87S",2
"lib2","SARS-CoV-2","CCCGCACCGGGCATAT",7,0.18,NA,NA,NA,NA,NA,NA,"stop","L60F E76P L131*",3
"lib2","SARS-CoV-2","CCCGCAGACGACACTT",1,8.28,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V11C I80E",2
"lib2","SARS-CoV-2","CCCGCAGATCTTTGCA",8,153.94,10.78,-0.05,0.03,2.88,1.12,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","CCCGCAGCTAGAAGAT",4,0,NA,NA,NA,NA,NA,NA,"stop","C6R V37* P82M G101T",4
"lib2","SARS-CoV-2","CCCGCAGGAATCAACT",4,54.44,10.3,-0.54,0.05,2.73,1.03,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CCCGCAGGACTCCACT",11,164.39,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","Y35K T55I T85N L131F",4
"lib2","SARS-CoV-2","CCCGCAGTAACTGCCA",3,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q N107W",2
"lib2","SARS-CoV-2","CCCGCAGTAATGTGAT",3,27.26,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S29G P82A I104L N120T T148I",5
"lib2","SARS-CoV-2","CCCGCATAGACAACCT",11,198.81,7.01,-3.83,0.23,1.5,1.17,0.01,">1 nonsynonymous","V11I Y143S P149T F156S",4
"lib2","SARS-CoV-2","CCCGCATCCGGTGAGG",5,258.67,9.38,-1.45,0.06,2.53,1.1,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","CCCGCCAAATCCCCCA",9,113.19,10.68,-0.15,0.05,2.87,1.07,0,">1 nonsynonymous","S43I I138H",2
"lib2","SARS-CoV-2","CCCGCCACCTCCAAGC",7,40.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V65R Y91I E154C S200Y",4
"lib2","SARS-CoV-2","CCCGCCATTTCCAAAC",4,48.14,9.1,-1.74,0.05,2.92,1.11,0,">1 nonsynonymous","K87R Y119H",2
"lib2","SARS-CoV-2","CCCGCCCCCGATCCCT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L L122S",2
"lib2","SARS-CoV-2","CCCGCCGTTTCACAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","CCCGCGAACTTACAGA",12,6.4,NA,NA,NA,NA,NA,NA,"stop","Q84* S113M G117C Q168N",4
"lib2","SARS-CoV-2","CCCGCGACCAGGCTAA",1,30.81,9.4,-1.43,0.05,2.92,1.03,0,">1 nonsynonymous","I142H Q168T",2
"lib2","SARS-CoV-2","CCCGCGCCTGAGTATT",4,124.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5Y F70R A105R",3
"lib2","SARS-CoV-2","CCCGCGGACTAGAGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","I28V K48H F70V N107R S147*",5
"lib2","SARS-CoV-2","CCCGCGTATCTAGAAC",7,90.85,10.77,-0.07,0.04,3,1.02,0,">1 nonsynonymous","K114M T201D",2
"lib2","SARS-CoV-2","CCCGCTAACTCGGCCA",5,13.4,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12C R136S Y143N",3
"lib2","SARS-CoV-2","CCCGCTAGGTCTGCCA",3,113,10.68,-0.16,0.03,2.92,1.07,0,">1 nonsynonymous","K26R L60W",2
"lib2","SARS-CoV-2","CCCGCTATACACGCTT",11,89.69,10.78,-0.06,0.03,2.96,1.04,0,"1 nonsynonymous","C195S",1
"lib2","SARS-CoV-2","CCCGCTCAACCTGCTA",1,7.53,10.76,-0.08,0.13,2.99,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCCGCTCGAAGGCTAG",8,63.58,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N64P N92L",2
"lib2","SARS-CoV-2","CCCGCTGGGTCAAGGA",12,40.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C49V F62R F99K P149S",4
"lib2","SARS-CoV-2","CCCGCTTAAAACACGT",8,4.86,NA,NA,NA,NA,NA,NA,"stop","Y35Q Y50* S113L S129K Q144K Q168K",6
"lib2","SARS-CoV-2","CCCGCTTCAAGAACAA",2,72.53,10.35,-0.48,0.03,2.87,1.02,0,">1 nonsynonymous","R16D D34V",2
"lib2","SARS-CoV-2","CCCGCTTCATTCAAAC",4,51.63,8.62,-2.22,0.11,2.12,1.03,0,">1 nonsynonymous","S29C L38I S41Y D98W N118H",5
"lib2","SARS-CoV-2","CCCGCTTCCAACGTGA",2,20.24,9.21,-1.63,0.15,1.5,1.04,0.01,">1 nonsynonymous","Y50T T63V I142V",3
"lib2","SARS-CoV-2","CCCGGAACCACGCCGC",15,168.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G101M G116Y L188V",3
"lib2","SARS-CoV-2","CCCGGAACTTCCCTCT",2,53.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27F N40P I88D P177Y",4
"lib2","SARS-CoV-2","CCCGGACAATGCGTGA",1,24.95,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","CCCGGACTTACATTAC",10,7.08,10.29,-0.55,0.13,2.64,1.07,0.01,">1 nonsynonymous","D34N P149L",2
"lib2","SARS-CoV-2","CCCGGAGAGATTAAAC",6,36.69,10.04,-0.8,0.38,1.5,1,0.06,">1 nonsynonymous","P82F A105T",2
"lib2","SARS-CoV-2","CCCGGAGAGGGCCAAC",6,2.51,NA,NA,NA,NA,NA,NA,"stop","R16Y L125* R136C G174S",4
"lib2","SARS-CoV-2","CCCGGAGCCCTACTCC",8,91.49,10.15,-0.68,0.02,2.82,1.07,0,">1 nonsynonymous","D97F S129H V173G",3
"lib2","SARS-CoV-2","CCCGGATAACAAGGGT",5,23.15,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","D68V V103K W106S L122S S129R F185P",6
"lib2","SARS-CoV-2","CCCGGATAGCGGTTCG",2,47.26,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L60D K87S Y93S S200V",4
"lib2","SARS-CoV-2","CCCGGATGCCAATTCA",5,64.46,10.63,-0.2,0.04,2.8,1.2,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","CCCGGATGGAACAAAA",3,7.86,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","A89K L122M F185R",3
"lib2","SARS-CoV-2","CCCGGATTAAAAACAG",2,21.83,9.2,-1.64,0.12,1.97,1.05,0.01,">1 nonsynonymous","S41H Y91V S139K T201S",4
"lib2","SARS-CoV-2","CCCGGATTTCTGACAC",9,149.85,10.82,-0.01,0.04,2.94,1.07,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","CCCGGCAAACTTGAAA",9,83.32,10.66,-0.17,0.04,2.83,1.19,0,">1 nonsynonymous","G9N T63L",2
"lib2","SARS-CoV-2","CCCGGCCATAAAACTA",1,11.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","W23P G51Y",2
"lib2","SARS-CoV-2","CCCGGCGCTATAGTAA",8,42.98,9.47,-1.37,0.11,2.04,1.03,0.01,">1 nonsynonymous","K94Y T140R",2
"lib2","SARS-CoV-2","CCCGGCGTTTCAGATC",1,1.75,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCCGGGAACACAAATA",9,162.22,10.81,-0.03,0.04,2.99,1.04,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","CCCGGGAATAGCCTCT",10,189.76,10.64,-0.19,0.02,2.95,1.04,0,">1 nonsynonymous","N1K L60A G196A",3
"lib2","SARS-CoV-2","CCCGGGACAAATGAGG",8,94.43,10.23,-0.6,0.04,2.92,1,0,">1 nonsynonymous","T15G C61E D97I",3
"lib2","SARS-CoV-2","CCCGGGATTGGATCTG",1,17.08,8.75,-2.09,0.14,1.66,1.09,0.01,">1 nonsynonymous","T55S V65W Y123Q",3
"lib2","SARS-CoV-2","CCCGGGCCGGAACTCA",12,282.97,8.03,-2.81,0.14,1.79,1.06,0.01,">1 nonsynonymous","Y35S V65C D98F Y119S",4
"lib2","SARS-CoV-2","CCCGGGCGTGTGATCA",3,21.53,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y35C F47G K87V A105Q E141Q",5
"lib2","SARS-CoV-2","CCCGGGTACCACAAGG",2,10.58,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S19V A89N D98W T170Q",4
"lib2","SARS-CoV-2","CCCGGGTCTGCACTGT",2,28.86,10.79,-0.05,0.09,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCGGTAATGAAATTT",6,1.22,NA,NA,NA,NA,NA,NA,"stop","V20S K56S D68* L122K E141V P161I",6
"lib2","SARS-CoV-2","CCCGGTATAAGATTAT",6,44.15,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12Q L122P G146T G152W F160S",5
"lib2","SARS-CoV-2","CCCGGTCCCCTGTGAG",11,118.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10F Q168G R179G",3
"lib2","SARS-CoV-2","CCCGGTCCGTGCCAGA",1,1.02,NA,NA,NA,NA,NA,NA,"stop","G83S T85R K199*",3
"lib2","SARS-CoV-2","CCCGGTGCTACCATGC",8,46.92,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N4W C61S G146Y T170R",4
"lib2","SARS-CoV-2","CCCGTAAATATTGGTA",1,28.91,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G51V C158F",2
"lib2","SARS-CoV-2","CCCGTAATTCTACTCG",4,15.66,9.09,-1.75,0.25,1.73,1.19,0.02,">1 nonsynonymous","L38C D98S",2
"lib2","SARS-CoV-2","CCCGTACACTGAACCG",2,10.42,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14L L95F G101L",3
"lib2","SARS-CoV-2","CCCGTACCACACATCT",1,46.78,10.77,-0.06,0.05,2.85,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CCCGTACCGTATATTG",7,88.61,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A105L N171H P177T",3
"lib2","SARS-CoV-2","CCCGTACTAAGTAAAA",5,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W P82A N171R V182L",4
"lib2","SARS-CoV-2","CCCGTACTCCGGATTA",12,207.8,9.28,-1.56,0.04,2.98,1.05,0,"1 nonsynonymous","Y119I",1
"lib2","SARS-CoV-2","CCCGTAGGACTCATAA",4,54.17,10.14,-0.69,0.04,2.97,1.02,0,">1 nonsynonymous","F12L T55Y K87M",3
"lib2","SARS-CoV-2","CCCGTATAAAACTCAT",10,90.57,8.14,-2.7,0.11,2.34,1.13,0,"1 nonsynonymous","C158R",1
"lib2","SARS-CoV-2","CCCGTATAACGTGAAA",4,134.09,8.92,-1.92,0.07,2.89,1.07,0,">1 nonsynonymous","N64S D98P Y119P N151M",4
"lib2","SARS-CoV-2","CCCGTATCCAATGATT",3,45.01,6.59,-4.24,0.37,1.5,1.1,0.02,">1 nonsynonymous","L95T G166Y",2
"lib2","SARS-CoV-2","CCCGTATCCACACATA",7,79.17,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G166M Q176V P191Y",3
"lib2","SARS-CoV-2","CCCGTATGGATTTTAT",3,20.82,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A105F D137G T201M",3
"lib2","SARS-CoV-2","CCCGTATTCGGGCTAG",2,51.25,10.42,-0.42,0.06,2.93,1.02,0,">1 nonsynonymous","N4L C61I",2
"lib2","SARS-CoV-2","CCCGTCAAGAACGATA",4,89.51,10.83,0,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCGTCACTACCTTCG",5,33.67,6,-4.84,2,3,1.15,0,"1 nonsynonymous","I80E",1
"lib2","SARS-CoV-2","CCCGTCATTGCAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K26* L38N N157L",3
"lib2","SARS-CoV-2","CCCGTCCGACGCGTGC",3,10.81,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N40C P161Y",2
"lib2","SARS-CoV-2","CCCGTCGCTGCGAGGT",5,1.84,NA,NA,NA,NA,NA,NA,"stop","C6* S147R",2
"lib2","SARS-CoV-2","CCCGTCTTTCATTGCT",5,72.13,9.42,-1.42,0.05,1.97,1.05,0,">1 nonsynonymous","A14V R136V L187D",3
"lib2","SARS-CoV-2","CCCGTGACAATCCCAT",6,7.64,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","CCCGTGGGACAAAATA",14,4.9,NA,NA,NA,NA,NA,NA,"stop","K114* S129Y",2
"lib2","SARS-CoV-2","CCCGTGGTCTCTATAA",2,19.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E76W Q84H R136V",3
"lib2","SARS-CoV-2","CCCGTGTACACATGCA",8,162.15,10.75,-0.08,0.06,2.91,1.11,0,">1 nonsynonymous","L5V N40H",2
"lib2","SARS-CoV-2","CCCGTTAAGCCCATCA",3,109.86,8.23,-2.61,0.16,2.06,1.05,0.01,">1 nonsynonymous","R27K S36A A145Y P161S",4
"lib2","SARS-CoV-2","CCCGTTAGACAGGCTG",1,8.29,10.22,-0.62,0.28,2.18,1,0.02,">1 nonsynonymous","A89G K128S",2
"lib2","SARS-CoV-2","CCCGTTAGTTGTGCGA",4,56.93,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V37L D90P",2
"lib2","SARS-CoV-2","CCCGTTCAAATCCGCA",6,25.45,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","Y50S P96L",2
"lib2","SARS-CoV-2","CCCGTTCAACAGGCGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S41F N110* K128T",3
"lib2","SARS-CoV-2","CCCGTTCACGTGACGC",5,54.53,9.45,-1.39,0.08,2.01,1.01,0,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","CCCGTTCTGAGAATGC",10,0.39,NA,NA,NA,NA,NA,NA,"stop","C31* L131H",2
"lib2","SARS-CoV-2","CCCGTTGAAAAACTAA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","C31* K56G L131H",3
"lib2","SARS-CoV-2","CCCGTTGACTAACAAG",3,0.17,NA,NA,NA,NA,NA,NA,"stop","Y21R I72* T201Q",3
"lib2","SARS-CoV-2","CCCGTTGTGAACATCC",16,268.22,10,-0.84,0.03,2.93,1.05,0,">1 nonsynonymous","V37W G116E G174L",3
"lib2","SARS-CoV-2","CCCGTTTGCCCGACTC",2,22.93,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","D68I R78L D112P",3
"lib2","SARS-CoV-2","CCCTAAAAATCCCTAC",3,81.06,10.8,-0.04,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTAAAAATCTTGAG",4,27.82,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D75S G117L L125K",3
"lib2","SARS-CoV-2","CCCTAAAACACCTACA",1,9.79,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T46I T55S N92F D98S N118C F156S",6
"lib2","SARS-CoV-2","CCCTAAAAGCGATTAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71G V77R D90A V103H",4
"lib2","SARS-CoV-2","CCCTAAAATACACCTT",6,0.41,NA,NA,NA,NA,NA,NA,"stop","L5K V20R R27M T46N G83S K94* L111I V115L N151Q K198P",10
"lib2","SARS-CoV-2","CCCTAAAATCCCACTT",8,156.21,6,-4.84,0.92,1.5,1.15,0,">1 nonsynonymous","S41P N120Y Y175V",3
"lib2","SARS-CoV-2","CCCTAAAATTATATTA",8,5.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","CCCTAAACAGCCTAAA",13,103.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K132Y C158F",2
"lib2","SARS-CoV-2","CCCTAAACAGCTACCG",3,20.92,6.14,-4.7,0.42,3,1.17,0,">1 nonsynonymous","E10L Y91H G146W",3
"lib2","SARS-CoV-2","CCCTAAACCACCACGT",5,59.7,10.75,-0.08,0.04,3,1.01,0,">1 nonsynonymous","R16Y P149R",2
"lib2","SARS-CoV-2","CCCTAAACGTACCAGC",10,42.24,9.73,-1.11,0.08,2.16,1.08,0,">1 nonsynonymous","P7T F12K",2
"lib2","SARS-CoV-2","CCCTAAAGATGTACCT",8,141.17,8.78,-2.06,0.06,2.95,1.1,0,">1 nonsynonymous","F156N G166A",2
"lib2","SARS-CoV-2","CCCTAAAGGGCAATCT",1,11.97,9.71,-1.12,0.28,1.79,1.08,0.03,">1 nonsynonymous","T15I R27K Q144H P169S",4
"lib2","SARS-CoV-2","CCCTAAAGTACTTAAT",2,34.82,8.79,-2.04,0.09,2.36,1.09,0,">1 nonsynonymous","A67F K114Y N120T E154S",4
"lib2","SARS-CoV-2","CCCTAAATCCCCTAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134V",1
"lib2","SARS-CoV-2","CCCTAAATCCTAGTCA",3,2.74,NA,NA,NA,NA,NA,NA,"stop","A42L G101F W106*",3
"lib2","SARS-CoV-2","CCCTAACAATAACATT",2,122.48,10.81,-0.02,0.05,2.9,1.12,0,"1 nonsynonymous","A190T",1
"lib2","SARS-CoV-2","CCCTAACCCTCCTTAT",5,30.07,9.66,-1.18,0.29,1.5,1,0.05,">1 nonsynonymous","A33N N110Y Q168Y Q176R",4
"lib2","SARS-CoV-2","CCCTAACCCTGTTTGA",9,18.73,10.12,-0.72,0.1,2.64,1.18,0,">1 nonsynonymous","W23V G83V C158W",3
"lib2","SARS-CoV-2","CCCTAACCCTTCCCAA",10,92.08,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K94S R124K T148I G174T",4
"lib2","SARS-CoV-2","CCCTAACGCGTTCGGG",4,54.34,10.2,-0.64,0.06,2.87,1.06,0,">1 nonsynonymous","S43T A105Y",2
"lib2","SARS-CoV-2","CCCTAACTCAAAACTA",3,32.92,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","Y39D G101P N157E F167I",4
"lib2","SARS-CoV-2","CCCTAACTCGATAATA",2,85.97,10.86,0.03,0.06,2.91,1.08,0,"1 nonsynonymous","P197R",1
"lib2","SARS-CoV-2","CCCTAACTTGATTGAA",1,21.72,9.32,-1.52,0.14,2.33,1.09,0.01,">1 nonsynonymous","S53Y C61A D75L Q84E",4
"lib2","SARS-CoV-2","CCCTAAGAAAGCCTTG",4,3.99,NA,NA,NA,NA,NA,NA,"stop","S19* E141* F156*",3
"lib2","SARS-CoV-2","CCCTAAGAACGTAGAC",2,41.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V37W Y50S I142K",3
"lib2","SARS-CoV-2","CCCTAAGACAATAGAA",1,35.12,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A81R D90V P149Q G174V",4
"lib2","SARS-CoV-2","CCCTAAGAGAAGCTCC",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W Y39E L60K I104N N110W",5
"lib2","SARS-CoV-2","CCCTAAGAGCAACATA",8,144.4,6.67,-4.17,0.34,1.5,1.09,0.02,">1 nonsynonymous","P7Y S164Y Q176R",3
"lib2","SARS-CoV-2","CCCTAAGATCCTACAT",7,122.96,9.79,-1.04,0.1,1.81,1.08,0,">1 nonsynonymous","T46K Y66L Y123L S129Q",4
"lib2","SARS-CoV-2","CCCTAAGTGGGTAGGT",8,63.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38S C49K N92L S113C I142H G166R",6
"lib2","SARS-CoV-2","CCCTAATAATAGCGCT",4,95.76,10.3,-0.53,0.05,2.97,1.04,0,">1 nonsynonymous","C6T C31F P149A",3
"lib2","SARS-CoV-2","CCCTAATAGAATACGC",15,138.78,6.34,-4.49,0.54,1.5,1.2,0.02,">1 nonsynonymous","F12K V52M T148H S164W",4
"lib2","SARS-CoV-2","CCCTAATAGTAACCGT",2,0.84,NA,NA,NA,NA,NA,NA,"stop","I2Q F70P S200*",3
"lib2","SARS-CoV-2","CCCTAATATACAATCG",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y F160I Q168T",3
"lib2","SARS-CoV-2","CCCTAATCGCCTCGGC",15,133.32,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","Y93P Q168L",2
"lib2","SARS-CoV-2","CCCTAATGAAAGTCCC",11,2.26,NA,NA,NA,NA,NA,NA,"stop","C6V K48A S113* I138*",4
"lib2","SARS-CoV-2","CCCTAATGTCAGCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L Y35D C61A G174L",4
"lib2","SARS-CoV-2","CCCTACAGAAAATGAA",4,54.5,10.49,-0.35,0.04,2.96,1.01,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","CCCTACCACCCCACCC",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T V65F C102K Y143L",4
"lib2","SARS-CoV-2","CCCTACCAGAGAATTA",7,2.27,NA,NA,NA,NA,NA,NA,"stop","I2L N13* G83I L122P E135T N151P C158Y Y159H",8
"lib2","SARS-CoV-2","CCCTACCAGCTCACTT",4,41.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q168W R179G",2
"lib2","SARS-CoV-2","CCCTACCATTCAACCA",4,55.62,8.83,-2.01,0.13,1.5,1.04,0.01,">1 nonsynonymous","G86H N110V",2
"lib2","SARS-CoV-2","CCCTACCTAAAAAGAT",1,41.74,9.18,-1.65,0.06,2.88,1.07,0,">1 nonsynonymous","E10M N118S",2
"lib2","SARS-CoV-2","CCCTACGAGGCATAGA",1,30.73,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","V11S G155S Y178R",3
"lib2","SARS-CoV-2","CCCTACGCCCCTACAT",3,69.2,6,-4.84,0.77,1.6,1.14,0.01,"1 nonsynonymous","R124Q",1
"lib2","SARS-CoV-2","CCCTACGCGAACCAAA",5,98.07,10.61,-0.23,0.03,2.94,1.06,0,">1 nonsynonymous","F8L I142T",2
"lib2","SARS-CoV-2","CCCTACGGAGGCCTGC",2,23.82,9.16,-1.67,0.18,1.84,1.13,0.01,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","CCCTACGTGAGACTAT",1,6.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R T63C",2
"lib2","SARS-CoV-2","CCCTACGTGTGTTCTC",1,93.54,10.41,-0.43,0.04,2.96,1.04,0,">1 nonsynonymous","T15P V37W C61F P149H",4
"lib2","SARS-CoV-2","CCCTACTCGCTACATT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K T15V S43H R127S",4
"lib2","SARS-CoV-2","CCCTACTGAATTCCTT",2,12.25,10.25,-0.59,0.29,2.68,1.32,0.04,"wildtype","",0
"lib2","SARS-CoV-2","CCCTAGAATTTCAAGA",4,61.14,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","Y143P",1
"lib2","SARS-CoV-2","CCCTAGACCCAAACGG",4,90.26,10.44,-0.39,0.05,2.87,1.11,0,">1 nonsynonymous","K56M S129L",2
"lib2","SARS-CoV-2","CCCTAGATCACATGTT",2,41.51,8.88,-1.95,0.17,1.5,1.06,0.01,">1 nonsynonymous","Y35P K56D T85L E135T",4
"lib2","SARS-CoV-2","CCCTAGATTGGGTAAC",1,14.2,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L38W C61L A105V R136L",4
"lib2","SARS-CoV-2","CCCTAGCAAGCTTCTA",2,11.07,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","C102G Y143F",2
"lib2","SARS-CoV-2","CCCTAGGCATAGCCAT",10,321.03,9.36,-1.47,0.07,2.62,1.09,0,">1 nonsynonymous","R27K Q176R",2
"lib2","SARS-CoV-2","CCCTAGGTAAACACCA",5,140.58,8.33,-2.5,0.13,1.51,1.09,0.01,">1 nonsynonymous","A33K P177S",2
"lib2","SARS-CoV-2","CCCTAGGTACAAACCA",5,40.66,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","F167T",1
"lib2","SARS-CoV-2","CCCTAGGTACTTGAAA",5,64.05,10.86,0.03,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTAGGTATTCTCTG",4,0,NA,NA,NA,NA,NA,NA,"stop","N4I Y35D T55I D112Y K128* G146P T201W",7
"lib2","SARS-CoV-2","CCCTAGTACTAACTTG",2,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A G86T F99I",3
"lib2","SARS-CoV-2","CCCTAGTATCAAATAT",4,128.25,10.81,-0.03,0.04,2.97,1.03,0,">1 nonsynonymous","N4M T201R",2
"lib2","SARS-CoV-2","CCCTAGTTAACCCATT",6,74.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5N A145T F167R",3
"lib2","SARS-CoV-2","CCCTATAAAATTTAAT",7,123.53,10.13,-0.71,0.06,2.71,1.08,0,">1 nonsynonymous","N58I D98Q",2
"lib2","SARS-CoV-2","CCCTATAACCCGATAT",5,2.07,NA,NA,NA,NA,NA,NA,"stop","N24F C49R S147*",3
"lib2","SARS-CoV-2","CCCTATAATCAGTTCA",8,67.58,10.78,-0.06,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTATAATGCTCTAA",2,12.45,6.84,-4,0.23,1.56,1.02,0.02,">1 nonsynonymous","P96C N118L R124S D137V T170R",5
"lib2","SARS-CoV-2","CCCTATACACATAAGT",16,89.31,6.18,-4.65,0.6,1.5,1.17,0.01,">1 nonsynonymous","S19R F44H G155Q",3
"lib2","SARS-CoV-2","CCCTATAGCCACGTAG",14,291.82,10.87,0.04,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTATATATTAACAT",8,161.77,6.15,-4.69,0.39,1.5,1.16,0,">1 nonsynonymous","N4A C31M P54M C61M N120C G155R",6
"lib2","SARS-CoV-2","CCCTATCCTAGCCCCA",3,9.31,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G9C F44G I88T A105D V173R A190V",6
"lib2","SARS-CoV-2","CCCTATCCTATGATTG",6,74.51,6.1,-4.73,1.08,1.5,1.34,0.03,">1 nonsynonymous","S69F R127N",2
"lib2","SARS-CoV-2","CCCTATCCTTCATAAG",15,159.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S29L K87A V103G",3
"lib2","SARS-CoV-2","CCCTATCGTCATTTAC",5,0,NA,NA,NA,NA,NA,NA,"stop","W23T D59S K87F F99T K114L K128E G146L V180*",8
"lib2","SARS-CoV-2","CCCTATCTAGGGGAGT",5,11.76,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","F8G C49H C102F",3
"lib2","SARS-CoV-2","CCCTATCTCTAGTCAA",5,102.09,10.32,-0.52,0.04,2.86,1.04,0,">1 nonsynonymous","K94C V173E T201R",3
"lib2","SARS-CoV-2","CCCTATCTGCATATTC",1,0.07,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CCCTATCTTGTATAGA",3,60.66,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","D112W Y121K F167A",3
"lib2","SARS-CoV-2","CCCTATGAACGCTAAC",7,133.21,9.78,-1.06,0.05,2.03,1.03,0,">1 nonsynonymous","T3P V32F G83V",3
"lib2","SARS-CoV-2","CCCTATGCCCCGAGCA",7,128.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37F V65F N92T I138N V173K",5
"lib2","SARS-CoV-2","CCCTATGTTTTTCAAC",3,54.85,10.65,-0.19,0.06,2.93,1.08,0,">1 nonsynonymous","K48R T63P",2
"lib2","SARS-CoV-2","CCCTATTCATAAGCAA",2,6.83,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54Q I104E V115W",3
"lib2","SARS-CoV-2","CCCTATTCGATCAACT",4,26.74,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F99T W106T K114M S164L",4
"lib2","SARS-CoV-2","CCCTATTCGGGACCAT",1,41.47,8.63,-2.2,0.3,1.5,1.02,0.05,">1 nonsynonymous","P7L F44T G83S N120F",4
"lib2","SARS-CoV-2","CCCTATTGCAAACAGC",5,52.27,8.57,-2.26,0.29,1.5,1,0.03,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","CCCTATTGTGCCAAAT",3,45.02,9.92,-0.92,0.04,2.85,1.01,0,">1 nonsynonymous","Y91S L122W",2
"lib2","SARS-CoV-2","CCCTATTTACGCCTCA",4,143.73,10.77,-0.07,0.04,2.96,1.05,0,"1 nonsynonymous","S108T",1
"lib2","SARS-CoV-2","CCCTATTTATCAAAAA",4,71.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S45T D75V G86L F134M P149S",5
"lib2","SARS-CoV-2","CCCTCAAAATAAAGAA",11,133.16,10.71,-0.12,0.04,2.94,1.08,0,">1 nonsynonymous","R27L P149R",2
"lib2","SARS-CoV-2","CCCTCAAACCATATCG",8,82.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19K K26L G86N N151S C158W",5
"lib2","SARS-CoV-2","CCCTCAACAGCGAAAC",3,93.67,9.05,-1.79,0.07,1.76,1.08,0,">1 nonsynonymous","K48L Q79R N120G",3
"lib2","SARS-CoV-2","CCCTCAACATGCAAGC",7,143.17,10.28,-0.56,0.06,2.9,1.07,0,">1 nonsynonymous","N30R T63Y",2
"lib2","SARS-CoV-2","CCCTCAACGCTAACAA",4,11.57,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L60H G86L N92S D97R P149W E154Y S184R",7
"lib2","SARS-CoV-2","CCCTCAAGCAACCTCT",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95P S200T",2
"lib2","SARS-CoV-2","CCCTCAATCTGACCGA",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63V S108R T140P",3
"lib2","SARS-CoV-2","CCCTCAATTTATGCGT",1,28.7,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S29L D98I Y121E",3
"lib2","SARS-CoV-2","CCCTCACACCACGGAT",2,50.61,10.83,0,0.06,2.91,1.1,0,"1 nonsynonymous","S29E",1
"lib2","SARS-CoV-2","CCCTCACATAAACCCA",1,17.66,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L60T Y91T C102L G166L E186A",5
"lib2","SARS-CoV-2","CCCTCACCATTGATGG",1,17.22,9.45,-1.39,0.08,3,1.01,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","CCCTCACCCTCATACA",9,35.99,6.82,-4.02,0.4,1.5,1.22,0.03,"1 nonsynonymous","G101C",1
"lib2","SARS-CoV-2","CCCTCACCTGTTACAA",4,0.72,NA,NA,NA,NA,NA,NA,"stop","N1V Y35T A42C K198*",4
"lib2","SARS-CoV-2","CCCTCAGTAGAATATA",9,129.8,8.75,-2.08,0.07,2.87,1.06,0,">1 nonsynonymous","N58L Q168I",2
"lib2","SARS-CoV-2","CCCTCAGTCCCCATGC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y I28R S36E F44V Y50I",5
"lib2","SARS-CoV-2","CCCTCAGTTCCGAACG",13,264.77,7.05,-3.78,0.15,1.5,1.1,0.01,">1 nonsynonymous","L5S Q84T Y143R S184G",4
"lib2","SARS-CoV-2","CCCTCAGTTTAAAAAA",4,25.48,6.63,-4.21,0.34,1.53,1.2,0.02,">1 nonsynonymous","L5A C49H T55F I72D L162Y Y175H",6
"lib2","SARS-CoV-2","CCCTCATACCCTGCTA",2,52.51,10.78,-0.06,0.05,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTCATCACATACGC",2,18.15,10.4,-0.44,0.08,2.98,1.08,0,">1 nonsynonymous","S129N G155R",2
"lib2","SARS-CoV-2","CCCTCATCGTTACATA",2,10.8,10.55,-0.29,0.13,2.9,1.11,0.01,">1 nonsynonymous","G9K K26S",2
"lib2","SARS-CoV-2","CCCTCATGAATTGTCC",4,30,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T148G F167K",2
"lib2","SARS-CoV-2","CCCTCATGTACCGCGA",6,1.41,NA,NA,NA,NA,NA,NA,"stop","N1L R25E A42T K56* L122K S139L E154W P161D",8
"lib2","SARS-CoV-2","CCCTCCAACAGCTCGA",8,80.64,6,-4.84,1.42,1.5,1.09,0.01,">1 nonsynonymous","P7Q G101T",2
"lib2","SARS-CoV-2","CCCTCCAACCAGCGAA",1,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R V181M",2
"lib2","SARS-CoV-2","CCCTCCAATCTGGTTA",1,56.58,9.98,-0.86,0.1,2.7,1.05,0,">1 nonsynonymous","Q84N G116N P149A",3
"lib2","SARS-CoV-2","CCCTCCACTCGAAGAC",5,44.32,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F12I G101C S139T N157T",4
"lib2","SARS-CoV-2","CCCTCCAGCGCCATAA",1,54.33,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S36T K87I Y93H T100S E141L S184I",6
"lib2","SARS-CoV-2","CCCTCCATAAAATAGG",16,258.61,10.26,-0.58,0.03,2.85,1.05,0,">1 nonsynonymous","Y35H T55S",2
"lib2","SARS-CoV-2","CCCTCCATGACCATGT",1,6.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R P54S Q176E",3
"lib2","SARS-CoV-2","CCCTCCATTCTCAAGG",1,25.68,10.81,-0.02,0.06,2.87,1.14,0,">1 nonsynonymous","N1S I104F",2
"lib2","SARS-CoV-2","CCCTCCATTTACTAAT",1,57.74,6,-4.84,1.96,3,1.12,0,">1 nonsynonymous","I104T E141V F160L Q176Y",4
"lib2","SARS-CoV-2","CCCTCCCACAATGCAT",1,51.47,10.89,0.06,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTCCCCTCACACTG",9,196.97,10.71,-0.12,0.05,2.9,1.08,0,">1 nonsynonymous","A145V P197R",2
"lib2","SARS-CoV-2","CCCTCCGCAGGACCGT",23,5.2,9.58,-1.26,0.33,2.27,1.11,0.04,">1 nonsynonymous","T15S S36Y A42P P161E",4
"lib2","SARS-CoV-2","CCCTCGAAGAAACTCA",7,80.69,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S19L F62T I142V",3
"lib2","SARS-CoV-2","CCCTCGCAAACTACAC",3,25.82,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S53G L60S A81T F99S F134G",5
"lib2","SARS-CoV-2","CCCTCGCATTACCCAT",6,43.47,6,-4.84,2,1.5,1.46,0.06,">1 nonsynonymous","D59I G86P C195L",3
"lib2","SARS-CoV-2","CCCTCGCCGAGGAAGG",5,47.36,9.28,-1.55,0.16,1.63,1.09,0.01,">1 nonsynonymous","A14V N92S",2
"lib2","SARS-CoV-2","CCCTCGCTATACCCGG",5,65.65,8.28,-2.55,0.11,2.48,1.09,0,">1 nonsynonymous","S53L S129I S139R G166H V173P K198N",6
"lib2","SARS-CoV-2","CCCTCGGTCAAACGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* F99Y Y159G T201M",4
"lib2","SARS-CoV-2","CCCTCGGTGTGTTTTA",9,67.85,8.79,-2.04,0.19,1.5,1.08,0.02,">1 nonsynonymous","W23F L38M S45M F134H",4
"lib2","SARS-CoV-2","CCCTCGTAATGTAGAA",4,52.23,10.92,0.08,0.05,2.95,1.06,0,">1 nonsynonymous","A33W D97F",2
"lib2","SARS-CoV-2","CCCTCGTTTTAATCCT",5,40.72,6,-4.84,2,3,1.22,0,">1 nonsynonymous","P7L C49L F126N D137S H189F C195L",6
"lib2","SARS-CoV-2","CCCTCTAAAGCGAAAT",8,37.94,8.36,-2.47,0.12,2.46,1.02,0.01,">1 nonsynonymous","L57S F126T",2
"lib2","SARS-CoV-2","CCCTCTAAAGTAAACT",5,0,NA,NA,NA,NA,NA,NA,"stop","G9E W23Q D112N L122S V153*",5
"lib2","SARS-CoV-2","CCCTCTAACATATGGT",1,17.69,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F44N L95E F99T Q168S",4
"lib2","SARS-CoV-2","CCCTCTAACTATTTTC",4,23.65,8.27,-2.57,0.2,1.89,1.05,0.03,">1 nonsynonymous","A81W T100H N118P",3
"lib2","SARS-CoV-2","CCCTCTACACTACTTA",3,82.62,8.39,-2.45,0.23,1.5,1.07,0.02,">1 nonsynonymous","R27G D34P G116V S129L K199S",5
"lib2","SARS-CoV-2","CCCTCTACCTATGCAG",1,52.51,10.26,-0.58,0.08,2.79,1.06,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","CCCTCTATTTCAAGAA",5,57.05,9.32,-1.52,0.22,1.5,1.03,0.02,">1 nonsynonymous","G9I Y35N E135V",3
"lib2","SARS-CoV-2","CCCTCTCAAGTTAAAG",2,78.22,6.23,-4.61,0.59,1.5,1.16,0.01,">1 nonsynonymous","V32L Q79F Y143T",3
"lib2","SARS-CoV-2","CCCTCTCTTGAACAAG",2,25.89,9.84,-1,0.14,2.47,1.18,0.01,">1 nonsynonymous","Y35N A42T N151S",3
"lib2","SARS-CoV-2","CCCTCTGGAAAATTTA",3,109.17,10.44,-0.39,0.05,2.94,1.05,0,">1 nonsynonymous","F8L V37I D98M",3
"lib2","SARS-CoV-2","CCCTCTGTGTATTTAA",3,22.47,10.91,0.07,0.09,3,1.01,0,"1 nonsynonymous","S147W",1
"lib2","SARS-CoV-2","CCCTCTTCAATAACAA",7,116.99,10.76,-0.07,0.03,2.92,1.09,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CCCTCTTCATTTAAAA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","C6R D90P N107M Y119*",4
"lib2","SARS-CoV-2","CCCTCTTCGAAGCGTA",6,80.92,9.96,-0.87,0.07,2.23,1.02,0,">1 nonsynonymous","N1L Y39S S45P",3
"lib2","SARS-CoV-2","CCCTCTTGTATACATA",5,80.78,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","G101L E141I N151Y",3
"lib2","SARS-CoV-2","CCCTCTTTAATAGCAA",4,60.77,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCCTCTTTGTTGTACA",7,1.02,NA,NA,NA,NA,NA,NA,"stop","G74M D90* I104E S147F",4
"lib2","SARS-CoV-2","CCCTGAAATTACAGGA",2,26.76,7.94,-2.89,0.28,2.43,1.33,0.02,">1 nonsynonymous","S41E L60K D112E",3
"lib2","SARS-CoV-2","CCCTGAACCATTTATT",4,47.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D90V Q176D",2
"lib2","SARS-CoV-2","CCCTGAACGCTTCCGA",2,52.9,10.74,-0.1,0.07,2.99,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTGAACTATGCCAT",3,12.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F99I G155H Q163L P169E Y175N F185S",6
"lib2","SARS-CoV-2","CCCTGAAGTGTTGACT",8,63.57,8.64,-2.19,0.06,2.69,1.07,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","CCCTGAATAAAAACAC",6,32.75,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D68C D97W W106S G152H Q168M",5
"lib2","SARS-CoV-2","CCCTGAATAACAGGCG",2,7.95,9.27,-1.57,0.33,1.5,1,0.04,">1 nonsynonymous","N13G T100H R127G",3
"lib2","SARS-CoV-2","CCCTGACAGCCATTCA",6,49.18,8.26,-2.58,0.25,1.5,1,0.02,">1 nonsynonymous","G51M R136G P197L",3
"lib2","SARS-CoV-2","CCCTGACCCATACGAC",3,99.88,8.91,-1.93,0.06,2.87,1.07,0,">1 nonsynonymous","Y119Q R136I",2
"lib2","SARS-CoV-2","CCCTGACTATATCTAT",3,29.49,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","F99P G155F",2
"lib2","SARS-CoV-2","CCCTGACTGTAATTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S36R N92* V180H V194I",4
"lib2","SARS-CoV-2","CCCTGAGAAGCCAACG",13,74.84,10.86,0.03,0.06,2.94,1.08,0,"1 nonsynonymous","E76Q",1
"lib2","SARS-CoV-2","CCCTGAGAGCACATCA",8,199.76,9.68,-1.16,0.02,2.96,1.04,0,"1 nonsynonymous","N157D",1
"lib2","SARS-CoV-2","CCCTGAGGTAGCCTGA",5,34.02,6.51,-4.32,0.35,1.5,1.07,0.02,">1 nonsynonymous","G86M Y91M",2
"lib2","SARS-CoV-2","CCCTGATATCAACTCC",8,147.78,8.15,-2.68,0.13,1.69,1.06,0.01,">1 nonsynonymous","Q79L Y119K E141H G174A",4
"lib2","SARS-CoV-2","CCCTGATTCAACATAC",3,6.58,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F44H L57A N118S Y123A N157D",5
"lib2","SARS-CoV-2","CCCTGATTCTTCACGT",4,112.09,10.78,-0.06,0.05,2.93,1.06,0,"1 nonsynonymous","K114N",1
"lib2","SARS-CoV-2","CCCTGCAAAAAAGATA",3,28.54,10.91,0.07,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTGCAATGGGACTA",7,38.09,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23G L57E P96I",3
"lib2","SARS-CoV-2","CCCTGCACAATATATT",2,60.88,10.48,-0.36,0.07,2.82,1.05,0,">1 nonsynonymous","N4P E141F",2
"lib2","SARS-CoV-2","CCCTGCACTTCTTTGT",1,10.02,10.86,0.02,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTGCAGAAAATGCA",3,14.4,9.95,-0.89,0.09,2.68,1,0,">1 nonsynonymous","T3K K132P G174P",3
"lib2","SARS-CoV-2","CCCTGCAGCATAGCAC",2,51.57,10.55,-0.29,0.06,2.82,1.16,0,">1 nonsynonymous","A33S S43M",2
"lib2","SARS-CoV-2","CCCTGCATCAGCCTTA",13,1.17,NA,NA,NA,NA,NA,NA,"stop","S36* W106T K128E D137S",4
"lib2","SARS-CoV-2","CCCTGCATCTTTGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K G172T",2
"lib2","SARS-CoV-2","CCCTGCATGTTAACAC",11,51.71,6.29,-4.55,0.57,1.5,1.14,0.02,">1 nonsynonymous","D34L T46A T63F R73Q",4
"lib2","SARS-CoV-2","CCCTGCCGTGCGCCGC",3,120.61,10.87,0.03,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTGCCTAAGTAATA",1,9.43,9.68,-1.15,0.18,2.09,1,0.01,">1 nonsynonymous","L5V G86S",2
"lib2","SARS-CoV-2","CCCTGCGAGTTTAACA",2,34.2,8.08,-2.75,0.17,2.3,1.06,0.01,"1 nonsynonymous","Y143K",1
"lib2","SARS-CoV-2","CCCTGCTCATTAATTT",6,82.33,10.79,-0.05,0.05,2.94,1.09,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","CCCTGCTCTATTCAAA",2,11.55,10.12,-0.72,0.16,2.55,1,0.01,">1 nonsynonymous","G51T T85N",2
"lib2","SARS-CoV-2","CCCTGGAGGACAGACC",6,65.91,6,-4.84,0.83,2.63,1.16,0.01,">1 nonsynonymous","F44R Y50M Y91H D97S",4
"lib2","SARS-CoV-2","CCCTGGATTCTCGAAA",17,170.35,9.85,-0.99,0.04,2.23,1.05,0,">1 nonsynonymous","I104S T148G",2
"lib2","SARS-CoV-2","CCCTGGATTGCACTTT",13,190.8,10.15,-0.69,0.04,2.66,1.07,0,">1 nonsynonymous","A14D T85G",2
"lib2","SARS-CoV-2","CCCTGGCGAAGCCATG",1,12.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M V77Q G101T N110R E141N",5
"lib2","SARS-CoV-2","CCCTGGCGGATCCAAG",7,74.7,9.46,-1.37,0.08,2.73,1.08,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","CCCTGGGACTGATTAC",3,46.8,10.76,-0.08,0.08,2.9,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTGGGTTTATACAA",11,186.13,8.68,-2.15,0.09,2.79,1.06,0,">1 nonsynonymous","S41M N120Q Y143Q",3
"lib2","SARS-CoV-2","CCCTGTTCAAAATCAA",4,52.15,9.45,-1.39,0.09,2.3,1.02,0,">1 nonsynonymous","V37M D98W I142Q",3
"lib2","SARS-CoV-2","CCCTTAAAATACTGAA",5,50.21,10.29,-0.55,0.05,2.91,1,0,"1 nonsynonymous","D34P",1
"lib2","SARS-CoV-2","CCCTTAAACGCTCTGA",8,10.38,NA,NA,NA,NA,NA,NA,"stop","N1* A14N F44V D90T R127L E135K",6
"lib2","SARS-CoV-2","CCCTTAAATAATGAAA",5,43.57,10.73,-0.11,0.03,3,1.03,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","CCCTTAAATCTATTGA",2,19.47,10.56,-0.27,0.07,2.97,1.07,0,"1 nonsynonymous","I138P",1
"lib2","SARS-CoV-2","CCCTTAACAAGTGTTG",1,12.35,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","C61E P82S G146C",3
"lib2","SARS-CoV-2","CCCTTAACAGCTACCA",3,37.8,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","R27W V77A P96S",3
"lib2","SARS-CoV-2","CCCTTAACCCTTCTAA",4,43.35,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y93S T100C T148V G166T",4
"lib2","SARS-CoV-2","CCCTTAAGAGATACAC",7,147.38,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","P7T C61A C150N",3
"lib2","SARS-CoV-2","CCCTTAAGCAATACCG",2,69.21,10.53,-0.31,0.32,1.5,1,0.07,">1 nonsynonymous","K48C C150W",2
"lib2","SARS-CoV-2","CCCTTACAATGAACAA",4,79.16,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E10G L60N Y93T N120R G155C",5
"lib2","SARS-CoV-2","CCCTTACACAAGTTCC",4,70.06,10.93,0.1,0.05,2.95,1.04,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","CCCTTACACCAAAGAG",3,37.08,10.8,-0.03,0.06,2.94,1.09,0,"1 nonsynonymous","S129Q",1
"lib2","SARS-CoV-2","CCCTTACCGATTCCCA",1,5.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y66F",1
"lib2","SARS-CoV-2","CCCTTACCTTGACACA",3,18.2,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","W23L F70L G83D A89L L95S S139M",6
"lib2","SARS-CoV-2","CCCTTACGTAAGTCAA",6,12.63,6.94,-3.9,1.08,3,1.09,0.01,">1 nonsynonymous","N13M S36R C158F",3
"lib2","SARS-CoV-2","CCCTTACGTCAAGTAT",5,25.31,7.63,-3.2,0.43,1.5,1.17,0.05,">1 nonsynonymous","V20R P54M",2
"lib2","SARS-CoV-2","CCCTTACTACAAAATA",3,31.83,10.08,-0.76,0.1,2.55,1.08,0,">1 nonsynonymous","G83R I88V D98A",3
"lib2","SARS-CoV-2","CCCTTACTGAGATAAA",1,20.5,9.34,-1.5,0.19,1.53,1.1,0.02,"1 nonsynonymous","W23R",1
"lib2","SARS-CoV-2","CCCTTAGACGATACAC",5,0.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCCTTAGGCTATAACG",4,25.98,10.71,-0.12,0.04,2.99,1,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","CCCTTATACGTTAAAA",11,28.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E A14S G86R",3
"lib2","SARS-CoV-2","CCCTTATACTGAAGTT",3,45.46,6.05,-4.79,0.69,1.5,1.13,0.01,">1 nonsynonymous","N4L G9I A105S N120I D137K E154L",6
"lib2","SARS-CoV-2","CCCTTATGAATAGCAG",7,73.8,9.69,-1.14,0.06,1.94,1.07,0,">1 nonsynonymous","A14W T148R",2
"lib2","SARS-CoV-2","CCCTTATGGAGGGACT",11,177.12,10.73,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","A42W",1
"lib2","SARS-CoV-2","CCCTTATGTGCTGTGC",1,25.76,6.59,-4.24,0.66,1.5,1.2,0.04,">1 nonsynonymous","L5R Y39V T46S N58R R136Y C150S",6
"lib2","SARS-CoV-2","CCCTTATTACCTCAAG",3,46.81,10.11,-0.73,0.11,2.46,1.1,0.01,">1 nonsynonymous","R16G T55M S139N S184M A190E",5
"lib2","SARS-CoV-2","CCCTTATTCCACCAAT",13,138.75,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N107Y Q144V T201N",3
"lib2","SARS-CoV-2","CCCTTCAAAAACTCAA",4,75.57,9.04,-1.79,0.08,2.88,1.07,0,">1 nonsynonymous","S36V Y66L Y119S",3
"lib2","SARS-CoV-2","CCCTTCAAAACTGGTT",5,52.36,6,-4.84,1.96,1.5,1.26,0.03,">1 nonsynonymous","P54I S113Q Y123A K128R",4
"lib2","SARS-CoV-2","CCCTTCAAATGGCTAT",10,118.94,10.35,-0.49,0.03,2.91,1.03,0,">1 nonsynonymous","L60S F160L T201W",3
"lib2","SARS-CoV-2","CCCTTCAACAGGTGGG",13,152.74,9.9,-0.93,0.08,2.17,1.04,0,">1 nonsynonymous","A33R T63N D98K",3
"lib2","SARS-CoV-2","CCCTTCAAGTCGAACC",1,59.04,10.92,0.08,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTTCAATGATAAAT",4,14.74,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","C6L L57V F167A G174C",4
"lib2","SARS-CoV-2","CCCTTCACACCGACTA",4,22.39,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","I28A F47R W106P N120T L131S",5
"lib2","SARS-CoV-2","CCCTTCAGCCTAAAAA",6,60.72,9.01,-1.82,0.1,2.49,1.03,0,">1 nonsynonymous","N4L Q168C",2
"lib2","SARS-CoV-2","CCCTTCAGGTTTTATA",3,5.3,11.03,0.2,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCCTTCATCTGTTCCG",10,61.79,10.23,-0.61,0.06,2.72,1.07,0,">1 nonsynonymous","D98Y N171S",2
"lib2","SARS-CoV-2","CCCTTCATGAATGAGT",15,246.88,10.47,-0.36,0.04,2.88,1.09,0,">1 nonsynonymous","K26L S129Y",2
"lib2","SARS-CoV-2","CCCTTCCCATTACAAC",15,132.95,10.63,-0.21,0.03,2.96,1.04,0,">1 nonsynonymous","D97S A105S",2
"lib2","SARS-CoV-2","CCCTTCCTCTTTCTCC",8,49.72,8.9,-1.94,0.07,1.71,1.05,0,">1 nonsynonymous","F17E K56A Q84R",3
"lib2","SARS-CoV-2","CCCTTCGAGCCATATG",1,13.71,6.05,-4.79,0.73,3,1.15,0.01,">1 nonsynonymous","V11I R25G S41W K132F G155L",5
"lib2","SARS-CoV-2","CCCTTCGGGTACCGGC",13,100.37,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V11A F44N R73E K94V R127Q P161E",6
"lib2","SARS-CoV-2","CCCTTCGTAAGAATAA",3,51.08,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","W23T S45L Y121C Y143N T201P",5
"lib2","SARS-CoV-2","CCCTTCGTATGTTTCA",2,28.22,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V37Y Y66E G83L N92R T140L E186K",6
"lib2","SARS-CoV-2","CCCTTCTCGAGCAGAA",3,23.77,10.16,-0.68,0.04,3,1.01,0,">1 nonsynonymous","T100L I142Y N151V",3
"lib2","SARS-CoV-2","CCCTTGAAGTACCACT",10,51.14,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2R E10F I72K",3
"lib2","SARS-CoV-2","CCCTTGACATCGACCT",1,19.7,10.04,-0.79,0.17,2.31,1.12,0.01,">1 nonsynonymous","A42F K56G V65W",3
"lib2","SARS-CoV-2","CCCTTGACCAAGAATT",3,0.64,NA,NA,NA,NA,NA,NA,"stop","L57A F99*",2
"lib2","SARS-CoV-2","CCCTTGAGAGATGTCT",3,122.55,7.39,-3.45,0.14,1.92,1.08,0.01,"1 nonsynonymous","Y175T",1
"lib2","SARS-CoV-2","CCCTTGCAACTTATGA",4,47.7,10.8,-0.04,0.05,2.94,1.07,0,"1 nonsynonymous","S29G",1
"lib2","SARS-CoV-2","CCCTTGCAGATACCGA",7,38.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41P G86A T100E A105M",4
"lib2","SARS-CoV-2","CCCTTGCATATACGTT",7,148.27,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","R16K G86Y I142S C150S A190C",5
"lib2","SARS-CoV-2","CCCTTGCGCAGCAGAA",5,105.65,8.1,-2.74,0.08,1.5,1.1,0,">1 nonsynonymous","A67Y G116Q F134L S184L",4
"lib2","SARS-CoV-2","CCCTTGGGGGTCTTGC",13,11.7,NA,NA,NA,NA,NA,NA,"stop","Y123* V173F",2
"lib2","SARS-CoV-2","CCCTTGGTATATATAC",2,23.85,9.85,-0.98,0.11,2.15,1.03,0.01,">1 nonsynonymous","N13Y S43C K132S S164K",4
"lib2","SARS-CoV-2","CCCTTGTAACAATATG",1,12.47,8.62,-2.22,0.09,2.7,1.07,0,"1 nonsynonymous","P161N",1
"lib2","SARS-CoV-2","CCCTTGTACTGACTCA",10,35.73,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","T63S W106R S113K",3
"lib2","SARS-CoV-2","CCCTTTAAAAGACCTT",2,13.89,10.93,0.09,0.16,2.86,1.06,0.02,"wildtype","",0
"lib2","SARS-CoV-2","CCCTTTAGGTTATAGC",9,200.51,9.91,-0.93,0.06,2.5,1.08,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","CCCTTTCCGCCTAGGC",6,195.83,9.45,-1.39,0.07,2.49,1.06,0,">1 nonsynonymous","E10K D90I F156P",3
"lib2","SARS-CoV-2","CCCTTTCGGGGACTTG",10,242.12,10.36,-0.48,0.04,2.76,1.1,0,">1 nonsynonymous","T15P D59L",2
"lib2","SARS-CoV-2","CCCTTTCTCAGTTGAC",11,140.48,9.7,-1.14,0.08,2.03,1.05,0,">1 nonsynonymous","V32G F44R",2
"lib2","SARS-CoV-2","CCCTTTGAGACAAGGC",10,359.92,10.14,-0.69,0.07,2.3,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","CCCTTTGATTGGAACT",2,98.32,10.53,-0.3,0.04,2.87,1.1,0,"1 nonsynonymous","Q144V",1
"lib2","SARS-CoV-2","CCCTTTGTCTGACAAC",2,88.19,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","N157V P177A",2
"lib2","SARS-CoV-2","CCCTTTTAAAGTAATA",2,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19I D34L N120P T140H",4
"lib2","SARS-CoV-2","CCCTTTTAAAGTAGCG",3,72.86,10.84,0.01,0.04,2.99,1.03,0,">1 nonsynonymous","I2D G9H",2
"lib2","SARS-CoV-2","CCCTTTTAAGTTCTAC",3,77.58,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","A14L S19R G117Q A190S",4
"lib2","SARS-CoV-2","CCCTTTTTAAAGAGAT",3,37.06,NA,NA,NA,NA,NA,0.44,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","CCCTTTTTACTCCCAT",2,99.31,10.86,0.03,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGAAAAATCCAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66*",1
"lib2","SARS-CoV-2","CCGAAAACGCCCACTT",7,97.92,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","V37Y Y50C L122Y K132E R179S",5
"lib2","SARS-CoV-2","CCGAAAACTAAATAGG",12,97.83,8.14,-2.69,0.2,1.5,1.06,0.01,">1 nonsynonymous","Y39K S45A L131Q",3
"lib2","SARS-CoV-2","CCGAAAACTAGCTTAA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50R D97M N120C A190I",4
"lib2","SARS-CoV-2","CCGAAAACTATAACAT",2,89.86,8.41,-2.42,0.1,2.01,1.09,0,">1 nonsynonymous","A14E N58F Q168G",3
"lib2","SARS-CoV-2","CCGAAAACTCAACATA",6,83.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E D90T",2
"lib2","SARS-CoV-2","CCGAAAAGATGCAATC",4,0.49,NA,NA,NA,NA,NA,NA,"stop","P133*",1
"lib2","SARS-CoV-2","CCGAAAAGTGAGGCTG",1,7.13,10.64,-0.2,0.38,2.8,1,0.06,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","CCGAAAATCCCGCTTG",1,16.36,9.71,-1.13,0.14,2.37,1,0.01,">1 nonsynonymous","D34G K128N V173Y",3
"lib2","SARS-CoV-2","CCGAAAATCCGTATCG",2,30.78,10.64,-0.2,0.06,2.87,1.11,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","CCGAAAATCCTCAGTA",3,43.56,9.4,-1.44,0.11,2.05,1.11,0,">1 nonsynonymous","K56P G155H",2
"lib2","SARS-CoV-2","CCGAAAATTAGACAAA",4,0.58,NA,NA,NA,NA,NA,NA,"stop","S129V N171*",2
"lib2","SARS-CoV-2","CCGAAACACCATTAAT",6,31.1,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","A145M F167N",2
"lib2","SARS-CoV-2","CCGAAACATTCACCTA",3,39.38,8.16,-2.67,0.14,2.02,1.01,0.01,">1 nonsynonymous","N4H T55R A105C Q168V K199S",5
"lib2","SARS-CoV-2","CCGAAACCCCTATTTT",5,40.38,7.06,-3.77,0.27,2.37,1.15,0.02,">1 nonsynonymous","D59G K87S S113G F126M F134L P149I F156S",7
"lib2","SARS-CoV-2","CCGAAACCGTCATGGT",2,56.77,9.01,-1.83,0.14,1.5,1,0.01,">1 nonsynonymous","V11A N107C",2
"lib2","SARS-CoV-2","CCGAAACCTTTGCGTA",6,84.32,10.04,-0.8,0.05,2.82,1.09,0,">1 nonsynonymous","N4W G116A",2
"lib2","SARS-CoV-2","CCGAAACGTAACGCAA",7,0.85,NA,NA,NA,NA,NA,NA,"stop","A14C F17E D68* R73Q K94L",5
"lib2","SARS-CoV-2","CCGAAACGTATGAGCC",12,224.14,9.69,-1.15,0.05,1.97,1.06,0,">1 nonsynonymous","V32K K94V",2
"lib2","SARS-CoV-2","CCGAAACTAGGGCAAA",1,28.13,6,-4.84,1.56,1.5,1.21,0.01,">1 nonsynonymous","F12D S43N K87R C150V",4
"lib2","SARS-CoV-2","CCGAAACTATATACAT",3,96.11,10.28,-0.55,0.03,2.94,1.02,0,"1 nonsynonymous","A33K",1
"lib2","SARS-CoV-2","CCGAAAGAAGAAAGGT",3,2.59,NA,NA,NA,NA,NA,NA,"stop","I28P Y123*",2
"lib2","SARS-CoV-2","CCGAAAGAATAGACAG",3,1.18,NA,NA,NA,NA,NA,NA,"stop","F47M P133* A190T",3
"lib2","SARS-CoV-2","CCGAAAGACAGATAAA",1,25.35,10.85,0.01,0.06,2.98,1.06,0,">1 nonsynonymous","Y39F S139T",2
"lib2","SARS-CoV-2","CCGAAAGGATACGTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I N64H G86K E186L",4
"lib2","SARS-CoV-2","CCGAAAGTCTCTTTTA",9,94.78,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L125R G146L",2
"lib2","SARS-CoV-2","CCGAAAGTGATTAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14D A89S F160V Y175*",4
"lib2","SARS-CoV-2","CCGAAAGTTCACTGGG",3,19.84,10.6,-0.24,0.1,2.87,1.13,0,"1 nonsynonymous","E154M",1
"lib2","SARS-CoV-2","CCGAAAGTTGCTTAAA",2,10.24,8.53,-2.3,0.45,1.5,1.07,0.07,">1 nonsynonymous","N13V D34R",2
"lib2","SARS-CoV-2","CCGAAATAATGACTAC",11,157.86,10.29,-0.55,0.03,2.92,1.06,0,">1 nonsynonymous","P7W N120R",2
"lib2","SARS-CoV-2","CCGAAATAGGATCGCT",3,28.93,9.74,-1.09,0.06,3,1,0,">1 nonsynonymous","T46Y I142A",2
"lib2","SARS-CoV-2","CCGAAATATTCAGTCT",4,57.31,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","E141W G152L N157I",3
"lib2","SARS-CoV-2","CCGAAATATTTAAAAA",3,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H G101H E135T F185D",4
"lib2","SARS-CoV-2","CCGAAATCACGACAAA",4,15.02,8.29,-2.54,0.13,2.02,1.05,0,">1 nonsynonymous","A42K T55Y A81L S113G",4
"lib2","SARS-CoV-2","CCGAAATGCCGCTCAA",3,34.7,9.52,-1.32,0.1,1.86,1.07,0,">1 nonsynonymous","S41Y A89R",2
"lib2","SARS-CoV-2","CCGAAATTATCTATAG",4,38.35,10.29,-0.54,0.09,2.78,1.07,0,">1 nonsynonymous","G116P K132C",2
"lib2","SARS-CoV-2","CCGAACAAACAAAGCT",6,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H K94D R136I",3
"lib2","SARS-CoV-2","CCGAACAAATAGATCA",5,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H S36K N118F F126I",4
"lib2","SARS-CoV-2","CCGAACAACACCGATC",5,18.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5Y D97V P149I V181H",4
"lib2","SARS-CoV-2","CCGAACAACGATGATT",5,42.97,9.93,-0.91,0.07,2.39,1.09,0,">1 nonsynonymous","K94A I104C",2
"lib2","SARS-CoV-2","CCGAACAATAAGAAAT",6,58.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I A145D P161S",3
"lib2","SARS-CoV-2","CCGAACAATGAATAGT",2,37.15,10.55,-0.29,0.05,2.93,1.07,0,">1 nonsynonymous","T15N D97L",2
"lib2","SARS-CoV-2","CCGAACAGACCTCTAG",9,112.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y35K A67P",2
"lib2","SARS-CoV-2","CCGAACCAGCACAAAT",4,30.89,8.22,-2.61,0.27,1.5,1,0.03,">1 nonsynonymous","V65H K87F N120E F134E",4
"lib2","SARS-CoV-2","CCGAACCATTTATACC",4,44.01,10.24,-0.59,0.05,2.86,1.15,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","CCGAACCCAAATCATA",3,9.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50N Q84E L95D S184P K199S",5
"lib2","SARS-CoV-2","CCGAACCGTGGTATAA",6,0.41,NA,NA,NA,NA,NA,NA,"stop","T15G V32Y G51L Y66* F126I",5
"lib2","SARS-CoV-2","CCGAACCTCGGAGTGT",8,52.26,10.1,-0.74,0.13,2.38,1.09,0.01,">1 nonsynonymous","D34M T55S Q84S",3
"lib2","SARS-CoV-2","CCGAACGAGAAGCGAT",3,74.56,8.35,-2.48,0.14,2.03,1.1,0.01,">1 nonsynonymous","V32A T140K Q176S",3
"lib2","SARS-CoV-2","CCGAACGATGTTCACC",3,30.82,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S69H V77K K87N Q168K T201Q",5
"lib2","SARS-CoV-2","CCGAACGCTTATATAT",5,21.91,10.78,-0.06,0.09,2.84,1.11,0,"1 nonsynonymous","A22R",1
"lib2","SARS-CoV-2","CCGAACGTAAAGCCGC",2,18.96,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N64K G86W I104Q Q144Y L162G T201S",6
"lib2","SARS-CoV-2","CCGAACGTATATTGTC",1,35.94,9.9,-0.94,0.06,2.86,1.14,0,">1 nonsynonymous","K26R F44N",2
"lib2","SARS-CoV-2","CCGAACTAGAACTTAC",9,39.69,9.93,-0.9,0.16,2.07,1,0.01,">1 nonsynonymous","P82I S139T",2
"lib2","SARS-CoV-2","CCGAACTATAAATGTA",4,14.82,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","W23S D97H F99R Q176K",4
"lib2","SARS-CoV-2","CCGAACTATACAGACT",4,79.26,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","E76W S129C P177Y",3
"lib2","SARS-CoV-2","CCGAACTCAACCCCAC",4,37.55,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F12G Y119C",2
"lib2","SARS-CoV-2","CCGAACTCCAAAATAT",1,0.92,NA,NA,NA,NA,NA,NA,"stop","V115*",1
"lib2","SARS-CoV-2","CCGAACTGACCAAGGA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R K94Y E135R Q163E",4
"lib2","SARS-CoV-2","CCGAACTGCTTCAGAT",1,8.56,8.09,-2.74,0.33,1.67,1.19,0.04,">1 nonsynonymous","C6M F12W K56C E141S",4
"lib2","SARS-CoV-2","CCGAAGAAACTAGAAT",13,83.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V103M R179V",2
"lib2","SARS-CoV-2","CCGAAGAACTGATTTT",12,54.31,9.36,-1.48,0.12,1.74,1.04,0.01,">1 nonsynonymous","Y50S C61R S147I K199M",4
"lib2","SARS-CoV-2","CCGAAGAAGTCTCAAA",11,59,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S113R Y159R Q168C",3
"lib2","SARS-CoV-2","CCGAAGAATACTTAGG",1,7.75,6.94,-3.9,0.39,1.83,1.03,0.01,">1 nonsynonymous","D68V G174Q",2
"lib2","SARS-CoV-2","CCGAAGACAACTACTA",5,23.15,9.69,-1.14,0.21,1.89,1.17,0.03,">1 nonsynonymous","T15Y C61G D90T",3
"lib2","SARS-CoV-2","CCGAAGACGATGATTT",1,7.46,10.78,-0.06,0.07,3,1,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","CCGAAGAGAGGGGACT",8,130.11,10.85,0.02,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGAAGAGATGGTCTT",16,177.04,10.83,-0.01,0.04,2.91,1.08,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","CCGAAGATTATAGGTA",3,106.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T63Q C158K T170W",3
"lib2","SARS-CoV-2","CCGAAGCACACCAAGG",1,36.54,9.91,-0.92,0.18,2.5,1.1,0.02,">1 nonsynonymous","Y39R T55C K87S S139R S164R",5
"lib2","SARS-CoV-2","CCGAAGCACCTCGATA",1,9.56,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","C6G F44I D59Q C158T",4
"lib2","SARS-CoV-2","CCGAAGCCAACATTAC",6,79.55,8.63,-2.21,0.02,2.91,1.06,0,">1 nonsynonymous","G9S Y143S",2
"lib2","SARS-CoV-2","CCGAAGCCTTATTACA",9,67.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y21W L57T K94D N120S S139P",5
"lib2","SARS-CoV-2","CCGAAGCGAGCTACAT",1,16.25,10.77,-0.06,0.07,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGAAGCTAAAATTAA",2,57,8.56,-2.27,0.18,1.57,1.07,0.01,">1 nonsynonymous","G9S R16S Y35Q F134V",4
"lib2","SARS-CoV-2","CCGAAGCTATAGCTGT",3,62.78,8.06,-2.78,0.15,1.93,1.03,0.01,">1 nonsynonymous","F99I Y119T",2
"lib2","SARS-CoV-2","CCGAAGGACTAAATAT",9,1.87,NA,NA,NA,NA,NA,NA,"stop","N1R C6* R16L N58P A89R D112T",6
"lib2","SARS-CoV-2","CCGAAGGATGCGTTTA",2,19.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S45P C49V T85M N118K F160R",5
"lib2","SARS-CoV-2","CCGAAGGGAATTGCAT",1,32.89,6.08,-4.76,0.75,1.5,1.21,0.01,">1 nonsynonymous","F8V S36W C102W",3
"lib2","SARS-CoV-2","CCGAAGGTAGTCCAAA",5,90.5,10.27,-0.57,0.04,2.96,1.07,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","CCGAAGGTCCATTTCA",1,19.91,10.15,-0.68,0.08,2.87,1,0,">1 nonsynonymous","S36L I142H",2
"lib2","SARS-CoV-2","CCGAAGTAAGTGGAGC",12,86.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G83E K94A F99R R179C",4
"lib2","SARS-CoV-2","CCGAAGTAGTACTGCC",8,61.85,6,-4.84,2,1.5,1.23,0.01,"1 nonsynonymous","V71K",1
"lib2","SARS-CoV-2","CCGAAGTATTCTTAAA",5,85.23,10.84,0,0.05,2.92,1.1,0,"1 nonsynonymous","S53D",1
"lib2","SARS-CoV-2","CCGAAGTATTTAGAAT",1,30.29,10.95,0.12,0.09,2.77,1.23,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGAAGTCAAATCTTG",3,0.32,NA,NA,NA,NA,NA,NA,"stop","V11P W23* T140I",3
"lib2","SARS-CoV-2","CCGAAGTTTCCACGCC",5,0.09,NA,NA,NA,NA,NA,NA,"stop","F62V T85R C102S P133*",4
"lib2","SARS-CoV-2","CCGAATAAAGACCTTA",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133V S147F T201R",3
"lib2","SARS-CoV-2","CCGAATAAGGTGCCTT",17,11.2,NA,NA,NA,NA,NA,NA,"stop","K48Q D97Y Y178*",3
"lib2","SARS-CoV-2","CCGAATACAGTGACAA",4,51.01,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C61Y D112T F167S",3
"lib2","SARS-CoV-2","CCGAATATACAAGAAC",5,50.41,6.3,-4.53,0.41,1.5,1.12,0.01,">1 nonsynonymous","P82C N151T Y175L",3
"lib2","SARS-CoV-2","CCGAATATCAGCCAAT",12,126.83,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A33R A105N T148I G155Y",4
"lib2","SARS-CoV-2","CCGAATATCGGTTTAA",4,23.14,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I28M F47S I72R N107A",4
"lib2","SARS-CoV-2","CCGAATATGAGGATAA",2,30.08,6.06,-4.77,1.14,1.5,1.19,0.02,">1 nonsynonymous","V77E I138P F160L",3
"lib2","SARS-CoV-2","CCGAATATTTAAGTGG",1,53.32,9.35,-1.48,0.08,2.21,1.06,0,">1 nonsynonymous","T3A R73T D90S",3
"lib2","SARS-CoV-2","CCGAATCAAAGAACTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","A33V V37N N107* K128S",4
"lib2","SARS-CoV-2","CCGAATCACACGCGGC",1,41.52,9.99,-0.85,0.11,2.85,1.09,0,">1 nonsynonymous","N107P E141T",2
"lib2","SARS-CoV-2","CCGAATCCGTATGATT",4,131.4,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y165E Y175S S200G",3
"lib2","SARS-CoV-2","CCGAATCTACAACTCG",6,128.53,10.64,-0.19,0.04,2.95,1.05,0,">1 nonsynonymous","Y39K N58I L122T",3
"lib2","SARS-CoV-2","CCGAATCTACGCCGAT",11,78.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9S F17I L60S D137G",4
"lib2","SARS-CoV-2","CCGAATCTCTAAACCG",4,13.58,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C49N T55Y I88F H189Y K199Y",5
"lib2","SARS-CoV-2","CCGAATGCGGTCACGG",8,92.38,6,-4.84,1.9,1.5,1.21,0.01,">1 nonsynonymous","C31E N64D G83L D90G",4
"lib2","SARS-CoV-2","CCGAATGTAGGCAAAA",7,0.27,NA,NA,NA,NA,NA,NA,"stop","A33* A105V L131E G152Y C195Y",5
"lib2","SARS-CoV-2","CCGAATGTATATTAAT",4,55.04,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D59Y T100I N107F S129G T201K",5
"lib2","SARS-CoV-2","CCGAATGTGTGCATCA",3,37.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I104L N110F L131C Y165P",4
"lib2","SARS-CoV-2","CCGAATTAACAACTGA",4,65.75,9.72,-1.12,0.07,2.06,1.06,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","CCGAATTACAAACCTG",2,12.87,6,-4.84,2,1.98,1.06,0,">1 nonsynonymous","D90G G146P N171I",3
"lib2","SARS-CoV-2","CCGAATTATAAGACAA",7,51.88,6,-4.84,2,3,1.22,0,">1 nonsynonymous","W23L C61A A81H K87L G101P Y123I Q144T V181L",8
"lib2","SARS-CoV-2","CCGAATTATCTTGATA",6,102.35,8.08,-2.76,0.15,1.84,1.18,0.01,">1 nonsynonymous","G116P Y165L",2
"lib2","SARS-CoV-2","CCGAATTCTAGTTAAT",13,29.24,6.2,-4.64,0.85,1.5,1.24,0.02,">1 nonsynonymous","G9R T15C P54I P96F Q163T",5
"lib2","SARS-CoV-2","CCGAATTGAAACGGGA",11,246.72,10.95,0.11,0.05,2.89,1.13,0,">1 nonsynonymous","T55N L122A",2
"lib2","SARS-CoV-2","CCGAATTGACATACGT",1,20.7,7.77,-3.07,0.27,1.68,1.05,0.03,">1 nonsynonymous","C6F S19G D98K",3
"lib2","SARS-CoV-2","CCGAATTGATCAGTAA",4,20.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V65K P133F G155K",3
"lib2","SARS-CoV-2","CCGAATTGCCCTGTTA",1,1.12,NA,NA,NA,NA,NA,NA,"stop","F47E G117*",2
"lib2","SARS-CoV-2","CCGAATTTAGAATGAT",6,94.59,10.88,0.05,0.06,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGAATTTCTAATATG",2,14.94,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","T3H R16D S36F R73Y R127V S139G Y178F",7
"lib2","SARS-CoV-2","CCGACAAAACACTAAA",3,62.85,10.45,-0.38,0.07,2.8,1.08,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","CCGACAAAAGCGGGCG",6,72.67,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N58L I80M Y93C R127T F167V",5
"lib2","SARS-CoV-2","CCGACAAAATCTAGGG",2,7.95,6.53,-4.31,1.21,3,1.18,0.01,">1 nonsynonymous","A14I D34H C61S F126G Q163H",5
"lib2","SARS-CoV-2","CCGACAAAATGACCAA",9,224.34,9.99,-0.84,0.06,2.68,1.04,0,"1 nonsynonymous","Y165W",1
"lib2","SARS-CoV-2","CCGACAAAGCTACACA",1,21,8.96,-1.87,0.08,2.74,1.09,0,">1 nonsynonymous","N4Q L60S N151T N171L P197Q",5
"lib2","SARS-CoV-2","CCGACAACATTAAGTA",2,90.55,9.36,-1.47,0.04,2.85,1.15,0,">1 nonsynonymous","P149I T170G",2
"lib2","SARS-CoV-2","CCGACAACTACCGTAA",2,27.78,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F8K T15I C61G D112T Q144E",5
"lib2","SARS-CoV-2","CCGACAAGACTTCAAA",6,108.74,10.74,-0.09,0.04,2.93,1.09,0,">1 nonsynonymous","D98T S200F",2
"lib2","SARS-CoV-2","CCGACACAAGTACACG",4,73.35,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V65S Q84S S129I G146Q Y175A",5
"lib2","SARS-CoV-2","CCGACACACTTGCAAT",1,27.23,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P7L D34E N92K",3
"lib2","SARS-CoV-2","CCGACACATCATATAA",9,83.03,8.63,-2.21,0.14,1.77,1.09,0.01,">1 nonsynonymous","N107T Y123S",2
"lib2","SARS-CoV-2","CCGACACCTCATCTGG",2,26.87,10.82,-0.01,0.12,2.87,1.15,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCGACACCTGGCTAGT",7,40.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S36T P54Y L95G E186T",4
"lib2","SARS-CoV-2","CCGACACTAAACCGTA",7,136.06,8.6,-2.23,0.07,2.9,1.07,0,">1 nonsynonymous","N4R S113N N120G",3
"lib2","SARS-CoV-2","CCGACACTAAGAACGT",3,5.1,10.74,-0.1,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGACACTATCCCTTG",4,2.1,NA,NA,NA,NA,NA,NA,"stop","R25*",1
"lib2","SARS-CoV-2","CCGACACTCTGGTATA",10,136.58,10.48,-0.35,0.04,2.86,1.06,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","CCGACAGAAGCCGATG",2,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M F62S K87R L131M I142P",5
"lib2","SARS-CoV-2","CCGACAGATGCATATA",3,10.58,10.71,-0.13,0.15,2.79,1.25,0.01,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","CCGACAGCGTAACTCC",4,3.4,NA,NA,NA,NA,NA,NA,"stop","A22I G51Y N107L L122*",4
"lib2","SARS-CoV-2","CCGACAGGAGATTATT",3,104.04,10.54,-0.29,0.05,2.96,1.05,0,">1 nonsynonymous","S36D F156H",2
"lib2","SARS-CoV-2","CCGACAGGAGGCCATG",4,5.48,NA,NA,NA,NA,NA,NA,"stop","N40* L57A",2
"lib2","SARS-CoV-2","CCGACAGTATAATACG",11,121.17,8.71,-2.12,0.16,1.5,1.05,0.01,">1 nonsynonymous","Y35S K56Y S147W F160L",4
"lib2","SARS-CoV-2","CCGACATAATATGGCC",17,167.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25E T55S F126T F160I",4
"lib2","SARS-CoV-2","CCGACATATAATCCTA",1,20.6,6.51,-4.32,0.85,1.5,1.25,0.04,">1 nonsynonymous","G101Q F160S",2
"lib2","SARS-CoV-2","CCGACATCTAAAAAAA",2,18.27,10.16,-0.67,0.08,2.9,1.02,0,">1 nonsynonymous","S45D V115N G116R P149S",4
"lib2","SARS-CoV-2","CCGACATGAGATTGCT",2,0.9,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib2","SARS-CoV-2","CCGACATTATTTGTAG",1,23.65,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F8S V37T D112A G146L P169I",5
"lib2","SARS-CoV-2","CCGACATTTGTACGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61S P82K A89* F134M",4
"lib2","SARS-CoV-2","CCGACCAATAAAACAG",2,1.01,NA,NA,NA,NA,NA,NA,"stop","N4* A81S I138C K199*",4
"lib2","SARS-CoV-2","CCGACCACAAACTACA",3,13.09,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6S Y93G",2
"lib2","SARS-CoV-2","CCGACCACCATTACAA",3,25.63,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I28T V37C I72S D97R L162K",5
"lib2","SARS-CoV-2","CCGACCACGGATCTAG",4,18.51,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4D V20Q P96S V180C",4
"lib2","SARS-CoV-2","CCGACCACTTTATAAG",2,40.63,9.44,-1.4,0.11,2.53,1.07,0.01,"1 nonsynonymous","P161Q",1
"lib2","SARS-CoV-2","CCGACCATGAGCTAAC",13,130.26,10.7,-0.13,0.04,2.86,1.08,0,">1 nonsynonymous","V37G F62V T140S",3
"lib2","SARS-CoV-2","CCGACCCGAGGATGTC",1,0.33,NA,NA,NA,NA,NA,NA,"stop","L5R N107*",2
"lib2","SARS-CoV-2","CCGACCCTATTCATCG",2,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100K Y121R",2
"lib2","SARS-CoV-2","CCGACCGACTGAGCTA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","N92S I104E Y119F T140L T148M Y159*",6
"lib2","SARS-CoV-2","CCGACCGGGTGATAAC",15,101.87,10.82,-0.02,0.07,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGACCTGTAATTACT",6,0.13,NA,NA,NA,NA,NA,NA,"stop","E10L I72* P96L R124I I138D L188H",6
"lib2","SARS-CoV-2","CCGACCTTATGCTCAA",6,72.88,10.29,-0.54,0.06,2.73,1.06,0,">1 nonsynonymous","P7K Q84N",2
"lib2","SARS-CoV-2","CCGACCTTTAATTCCC",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M G86M L95R N107G D137N G155C",6
"lib2","SARS-CoV-2","CCGACGAAAATTAACA",2,77.28,9.91,-0.92,0.08,2.34,1.08,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","CCGACGAACCGAAAAA",2,10.78,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","C61F K87Y S113R P149N Q163N",5
"lib2","SARS-CoV-2","CCGACGACTACCATAC",1,12.57,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D90V D112L Y159G",3
"lib2","SARS-CoV-2","CCGACGACTGGGGACT",2,17.43,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y35E P96E G174E",3
"lib2","SARS-CoV-2","CCGACGATAATCACCG",3,57.05,6.56,-4.28,0.39,1.5,1.17,0.02,">1 nonsynonymous","N92G K128C Q163R",3
"lib2","SARS-CoV-2","CCGACGCCATGTAGAA",4,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A Y175S",2
"lib2","SARS-CoV-2","CCGACGCCTATGATAA",30,145.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60M D68Q",2
"lib2","SARS-CoV-2","CCGACGTAAATCCAGG",18,142.82,8.83,-2,0.15,1.5,1.03,0.01,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","CCGACTAAATATCACA",1,61.94,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P82R S139W Y178T",3
"lib2","SARS-CoV-2","CCGACTAACAGCCAGT",11,21.73,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R25Q I88H S108L F126S",4
"lib2","SARS-CoV-2","CCGACTAATCACCCCA",2,28.71,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","W23T A105N G146V",3
"lib2","SARS-CoV-2","CCGACTAGAACATGTT",5,35.03,7.89,-2.95,0.26,1.5,1.1,0.07,">1 nonsynonymous","G51D R136T",2
"lib2","SARS-CoV-2","CCGACTATATGTCTCC",3,21.65,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","K87P F99V Y165S",3
"lib2","SARS-CoV-2","CCGACTCAAAACGACA",2,23.67,10.9,0.06,0.06,2.83,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGACTCAACGTAATA",2,9.14,9.55,-1.29,0.27,2.68,1.06,0.01,">1 nonsynonymous","R16N V71T K114N Y121L",4
"lib2","SARS-CoV-2","CCGACTCAGAATGATA",5,61.43,10.71,-0.12,0.07,2.88,1.14,0,"1 nonsynonymous","E186N",1
"lib2","SARS-CoV-2","CCGACTCCTATGACGG",12,325.55,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","V37R T148K G172I",3
"lib2","SARS-CoV-2","CCGACTCTAACGATAT",1,4.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T148K",1
"lib2","SARS-CoV-2","CCGACTGAAACGGGGC",6,42.77,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L5R C61Y Y93S",3
"lib2","SARS-CoV-2","CCGACTGACCCCCTTC",10,10.86,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15A A22V S53K N157T G166S",5
"lib2","SARS-CoV-2","CCGACTGATATCTTAT",7,62.76,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","V11N F44I C61I K94D",4
"lib2","SARS-CoV-2","CCGACTGCAATACTCC",1,18.39,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","L95V N107Q S139N S147L F156L",5
"lib2","SARS-CoV-2","CCGACTGGACCACTAA",4,30.69,10.21,-0.62,0.1,2.78,1.03,0.01,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","CCGACTGTACATCAAT",2,41.32,10.36,-0.47,0.04,2.91,1.06,0,">1 nonsynonymous","S36I L60S",2
"lib2","SARS-CoV-2","CCGACTTATTGCCGTG",3,33.16,9.62,-1.22,0.17,2.14,1,0.01,">1 nonsynonymous","V20S D90N",2
"lib2","SARS-CoV-2","CCGACTTCCGTCTAAA",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L G74I D112N T201K",4
"lib2","SARS-CoV-2","CCGACTTGACCACTTA",1,39.87,9.44,-1.39,0.09,2.86,1.12,0,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","CCGACTTTAATACGCT",1,6.66,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","N13P S19F F70L V103T I138G F167S Y175L T201L",8
"lib2","SARS-CoV-2","CCGACTTTTGGACCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* D34A L95F V103I E154G",5
"lib2","SARS-CoV-2","CCGAGAAACAGTCTAC",1,21.56,9.64,-1.19,0.33,1.5,1.14,0.04,">1 nonsynonymous","E141S C150Y",2
"lib2","SARS-CoV-2","CCGAGAAAGACTTAAC",7,254.66,8.96,-1.88,0.06,2.3,1.1,0,">1 nonsynonymous","L5T T15K D59A G146N V173Q A192L",6
"lib2","SARS-CoV-2","CCGAGAACTTAAACAT",2,8.68,10.66,-0.17,0.06,2.96,1.04,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","CCGAGAACTTGTATAT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","P96L K114D T201*",3
"lib2","SARS-CoV-2","CCGAGAAGATGTAGGC",3,52.14,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","T15S E76A T85L F156S G166E",5
"lib2","SARS-CoV-2","CCGAGAAGTTATGATA",7,100.87,9.83,-1.01,0.09,2.53,1.05,0,">1 nonsynonymous","I2T L122S T148A G155R E186L",5
"lib2","SARS-CoV-2","CCGAGAATCACTAGTA",1,5.06,10.92,0.08,0.11,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGAGAATCATGCAAT",6,5.09,NA,NA,NA,NA,NA,NA,"stop","G86K K198*",2
"lib2","SARS-CoV-2","CCGAGAATCGCCATTA",4,62.66,6.45,-4.39,0.71,1.5,1.25,0.04,">1 nonsynonymous","D90R W106S G174W",3
"lib2","SARS-CoV-2","CCGAGACAATAAGCAG",5,0.19,NA,NA,NA,NA,NA,NA,"stop","C6D A14D G51S C61* I88Y T100E Y121T P161S",8
"lib2","SARS-CoV-2","CCGAGACACCTCCCGA",1,13.55,7.14,-3.7,0.67,1.5,1,0.03,">1 nonsynonymous","F12Y W23K V71C",3
"lib2","SARS-CoV-2","CCGAGACACTCCCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I80S Y159*",2
"lib2","SARS-CoV-2","CCGAGACAGTAAGCGC",9,182.7,10.76,-0.07,0.05,2.88,1.11,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","CCGAGACATAGGGCCT",3,65.09,10.74,-0.1,0.03,2.99,1.03,0,">1 nonsynonymous","S36K E141K",2
"lib2","SARS-CoV-2","CCGAGACCAACACGAC",1,7.23,6,-4.84,1.92,3,1.15,0.01,">1 nonsynonymous","F99S A105E P133V Y143T Y165V S200W",6
"lib2","SARS-CoV-2","CCGAGACTCGACCATA",2,52.04,10.64,-0.19,0.04,2.93,1.07,0,">1 nonsynonymous","P54L D97L A105T H189P",4
"lib2","SARS-CoV-2","CCGAGAGAAAGCGATG",8,31.92,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N1R F12Q D59N I88L Y93R K128S",6
"lib2","SARS-CoV-2","CCGAGAGGTCTTATCT",1,13.57,10.67,-0.16,0.09,2.98,1,0,"1 nonsynonymous","V11L",1
"lib2","SARS-CoV-2","CCGAGATAAAAGGTGT",9,208.99,8.47,-2.37,0.11,2.87,1.05,0,">1 nonsynonymous","D59W Y119L Q168E",3
"lib2","SARS-CoV-2","CCGAGATAGGTTAACT",6,28.6,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C6T Y21R S53M P96S G166R",5
"lib2","SARS-CoV-2","CCGAGATCTTTTATAA",1,5.02,6.62,-4.21,0.89,1.5,1.14,0.06,">1 nonsynonymous","T15S K87M Y91M W106A P149T",5
"lib2","SARS-CoV-2","CCGAGATTTGCCTAAC",2,30.78,9.72,-1.12,0.04,2.95,1.08,0,">1 nonsynonymous","N118K S200I",2
"lib2","SARS-CoV-2","CCGAGCAAAAATGAGG",8,38.08,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D59F P149T L183S",3
"lib2","SARS-CoV-2","CCGAGCAAATGATGTG",14,266.1,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F17K T55S P177Y P197T",4
"lib2","SARS-CoV-2","CCGAGCACCTTACGCG",5,89.35,9.94,-0.9,0.03,2.93,1,0,">1 nonsynonymous","C6N T85K G152E",3
"lib2","SARS-CoV-2","CCGAGCCAAATATCCG",3,74.17,9.84,-1,0.08,1.98,1.01,0,">1 nonsynonymous","F8Y L60S D98L G146S",4
"lib2","SARS-CoV-2","CCGAGCCCGGCTGCGA",7,124.84,10.13,-0.71,0.03,2.71,1.05,0,">1 nonsynonymous","L57A N64Y",2
"lib2","SARS-CoV-2","CCGAGCCCTTTACTTA",2,45.29,7.84,-3,0.14,2.47,1.15,0.01,">1 nonsynonymous","P149S C158S",2
"lib2","SARS-CoV-2","CCGAGCGCCCAGATAT",6,50.75,10.82,-0.02,0.04,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGAGCTACAAAACAA",5,2.47,NA,NA,NA,NA,NA,NA,"stop","F99C E135*",2
"lib2","SARS-CoV-2","CCGAGCTATAAAATAA",1,17.53,10.6,-0.24,0.09,2.95,1.03,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","CCGAGCTCCTAGTGTT",2,70.67,10.62,-0.22,0.04,2.97,1.03,0,">1 nonsynonymous","E10R S147H",2
"lib2","SARS-CoV-2","CCGAGCTGTTCAACTT",10,1.75,NA,NA,NA,NA,NA,NA,"stop","P7Q W23* P82L Y93V F160R G172D",6
"lib2","SARS-CoV-2","CCGAGCTTTAAAAAGT",1,13.55,10.71,-0.13,0.09,2.94,1,0,">1 nonsynonymous","G83L N120Q",2
"lib2","SARS-CoV-2","CCGAGGAAGAAGGCCG",2,8.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K26I D59M D90S L95Y G146S F185N",6
"lib2","SARS-CoV-2","CCGAGGAATCTCAGAC",7,161.7,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N4I N107T N118H",3
"lib2","SARS-CoV-2","CCGAGGACGCCTTCAA",1,27.86,10.75,-0.08,0.07,2.97,1.06,0,">1 nonsynonymous","I2C G83R",2
"lib2","SARS-CoV-2","CCGAGGATTGGTACTA",1,7.38,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C49Y F167L",2
"lib2","SARS-CoV-2","CCGAGGCAGAAAATAA",4,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y A42M D112F S184N",4
"lib2","SARS-CoV-2","CCGAGGCTTACATATA",6,30.71,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","T3A G9L F99L S184F",4
"lib2","SARS-CoV-2","CCGAGGCTTTTGTGCG",2,42.79,9.5,-1.33,0.11,2.35,1.08,0.01,">1 nonsynonymous","D34T P54Q G152T",3
"lib2","SARS-CoV-2","CCGAGGGAAGTACAGC",9,54.38,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","E76L C158G S200L",3
"lib2","SARS-CoV-2","CCGAGGGACAAGTGTT",3,85.98,10.88,0.04,0.07,2.86,1.17,0,">1 nonsynonymous","P149L N171W",2
"lib2","SARS-CoV-2","CCGAGGGACTCTCAAA",7,22.66,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","S41H T100A G155M R179E",4
"lib2","SARS-CoV-2","CCGAGGGCTAAAGAAG",5,83.9,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","L95W D112S",2
"lib2","SARS-CoV-2","CCGAGGGTAATATAAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","A33Q L95A I142*",3
"lib2","SARS-CoV-2","CCGAGGGTCCCGCAGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E Q84L",2
"lib2","SARS-CoV-2","CCGAGGTAACCTTCTG",9,108.93,8.96,-1.88,0.1,2.17,1.16,0,">1 nonsynonymous","G51S G146Y",2
"lib2","SARS-CoV-2","CCGAGGTCTAAGCTCT",1,17.6,9.1,-1.73,0.07,2.07,1,0,">1 nonsynonymous","K56V D112L",2
"lib2","SARS-CoV-2","CCGAGGTGGCAGCTAC",4,57.64,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T63I N118L I142N N157S F167W",5
"lib2","SARS-CoV-2","CCGAGGTTTATATTAA",8,93.14,10.57,-0.27,0.06,2.87,1.15,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CCGAGTGTTCCACATA",3,400.62,10.72,-0.11,0.01,2.99,1.01,0,">1 nonsynonymous","N64I K128E S200Y",3
"lib2","SARS-CoV-2","CCGAGTTGTCTCCACA",2,27.7,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6F A18E T100L Y143V F167L",5
"lib2","SARS-CoV-2","CCGATAAAAAGATCTA",5,124.71,10.45,-0.39,0.04,2.93,1.08,0,">1 nonsynonymous","L5K K56A Q84L T201C",4
"lib2","SARS-CoV-2","CCGATAAAACAAAACC",1,12.69,8.26,-2.57,0.2,2.14,1,0.02,">1 nonsynonymous","G83I Y143M",2
"lib2","SARS-CoV-2","CCGATAAAATTCATCT",4,116.27,10.76,-0.08,0.08,2.79,1.1,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","CCGATAAACAAAACGA",2,35.63,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19T F70L D98V E135R",4
"lib2","SARS-CoV-2","CCGATAAACAGACGGC",2,101.66,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L60M S129I C158G",3
"lib2","SARS-CoV-2","CCGATAAATACAGCAT",7,127.16,8.69,-2.15,0.08,1.9,1.1,0,">1 nonsynonymous","F44T G116A P149Q G155T",4
"lib2","SARS-CoV-2","CCGATAACAACCAGTA",1,6.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105I R136D",2
"lib2","SARS-CoV-2","CCGATAAGGAAAACAT",3,15.44,6.56,-4.27,0.84,1.5,1.16,0.06,">1 nonsynonymous","I28T D68K D98G Q163P",4
"lib2","SARS-CoV-2","CCGATAAGTGGGTCAG",5,1.95,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib2","SARS-CoV-2","CCGATAATAATTTAAA",3,37.57,10.9,0.07,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGATAATCAACATAC",9,127.5,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","G9H I80R D97E D112L",4
"lib2","SARS-CoV-2","CCGATAATGATTAGAA",2,9.16,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14G S53Y R124I N171K",4
"lib2","SARS-CoV-2","CCGATAATTTGAAGCT",12,34.8,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V52H C61T D68R I80Y T85N D98L",6
"lib2","SARS-CoV-2","CCGATACAAACTCTAT",3,2.88,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib2","SARS-CoV-2","CCGATACAAGACACCT",4,56.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S36E N92G Y143L",3
"lib2","SARS-CoV-2","CCGATACACCCCCCGG",11,2.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CCGATACGGTTTGTAA",4,87.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12K V37D P96R S108W F156S",5
"lib2","SARS-CoV-2","CCGATACTTGTGTTCG",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35F L60C D90L",3
"lib2","SARS-CoV-2","CCGATAGACCACACTG",8,101.83,10.72,-0.11,0.03,2.99,1.03,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","CCGATAGATATTGAAT",1,33.76,10.86,0.02,0.08,2.91,1.1,0,"1 nonsynonymous","K128G",1
"lib2","SARS-CoV-2","CCGATAGCATGTAATA",6,90.29,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G101V R127N G152S",3
"lib2","SARS-CoV-2","CCGATATAATTACGTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89D",1
"lib2","SARS-CoV-2","CCGATATACACATATT",6,153.48,10.8,-0.04,0.05,2.95,1.05,0,"1 nonsynonymous","T85N",1
"lib2","SARS-CoV-2","CCGATATATCGGATGC",8,194.59,9.81,-1.03,0.07,2.3,1.04,0,">1 nonsynonymous","V32F F62N D98E A145S",4
"lib2","SARS-CoV-2","CCGATATATTTTACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8*",1
"lib2","SARS-CoV-2","CCGATATCAAACAGAA",1,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q T63A Y93Q P149F",4
"lib2","SARS-CoV-2","CCGATATCAATGTACA",6,3.14,NA,NA,NA,NA,NA,NA,"stop","G9L V103D Q176* K199V",4
"lib2","SARS-CoV-2","CCGATATGTCTGGAGC",4,50.8,10.87,0.03,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGATATTCCGAGAAA",5,107.8,10.2,-0.64,0.04,2.88,1.05,0,">1 nonsynonymous","L5D N107P T148S",3
"lib2","SARS-CoV-2","CCGATATTTAGTCTGT",3,48.55,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G9A I88W N171H",3
"lib2","SARS-CoV-2","CCGATATTTCCAGAAG",8,58.45,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","N58K Y91H D98P I104S",4
"lib2","SARS-CoV-2","CCGATCAAGACTACCT",11,199.89,10.25,-0.59,0.03,2.9,1.04,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","CCGATCACAATTGAAT",5,13.71,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","N13H N92L Y143L F156L C158Q",5
"lib2","SARS-CoV-2","CCGATCATAAATTAAG",3,27.11,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N58I V103Q R127E",3
"lib2","SARS-CoV-2","CCGATCATAATGAACT",4,29.97,10.21,-0.62,0.1,2.73,1.04,0,"1 nonsynonymous","S69C",1
"lib2","SARS-CoV-2","CCGATCCAAACATACC",18,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39P A105K",2
"lib2","SARS-CoV-2","CCGATCCATCCCCGGA",5,55.09,10.64,-0.2,0.05,2.93,1.1,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","CCGATCCATTCTCAAA",1,56.2,10.93,0.1,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGATCCGTCTTACCT",4,92.46,10.84,0,0.05,2.95,1.06,0,">1 nonsynonymous","A190T K198Q",2
"lib2","SARS-CoV-2","CCGATCGACCTAGTGT",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104P S147I E154V C158Y",4
"lib2","SARS-CoV-2","CCGATCTATTTAACTC",11,108.68,10.81,-0.03,0.04,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGATGAAAAGTAAAA",2,40.44,10.72,-0.12,0.03,2.96,1.05,0,"1 nonsynonymous","V115S",1
"lib2","SARS-CoV-2","CCGATGAAGACTTTAA",7,165.39,10.56,-0.28,0.03,2.88,1.09,0,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","CCGATGACCATAGCAG",15,229.07,10.5,-0.34,0.04,2.92,1.05,0,"1 nonsynonymous","F44A",1
"lib2","SARS-CoV-2","CCGATGACCGACCTAC",13,109.01,10.7,-0.13,0.04,2.91,1.11,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","CCGATGAGTGTAAACA",1,9.41,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","P7Q S19Q C49V N92S F99R",5
"lib2","SARS-CoV-2","CCGATGCAGATATATA",1,43.04,9.99,-0.85,0.13,2.66,1.04,0.01,">1 nonsynonymous","S19A K48S S147T",3
"lib2","SARS-CoV-2","CCGATGCCACATAAAT",7,68.02,10.78,-0.05,0.03,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGATGCCCCATTAGT",13,81.41,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","D68R",1
"lib2","SARS-CoV-2","CCGATGCCTCGGTTCT",6,22.35,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L5V C31T A105P",3
"lib2","SARS-CoV-2","CCGATGCGTTATAAGT",2,78.31,8.19,-2.65,0.12,2.82,1.04,0,">1 nonsynonymous","K87E G166Y T201V",3
"lib2","SARS-CoV-2","CCGATGGAAACTGCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39L G83P N92G N120L P161L T201*",6
"lib2","SARS-CoV-2","CCGATGGATTAACGTA",1,10.99,8.14,-2.69,0.27,1.5,1,0.03,">1 nonsynonymous","S69M N107C Y123K",3
"lib2","SARS-CoV-2","CCGATGGCACGTCCGA",4,32.73,8.91,-1.93,0.21,1.5,1,0.02,">1 nonsynonymous","G86Q S164T",2
"lib2","SARS-CoV-2","CCGATGGGTAACCCTG",5,152.38,8.5,-2.33,0.1,2,1.11,0,">1 nonsynonymous","T55D N107T Q176R",3
"lib2","SARS-CoV-2","CCGATGGTCAAATTTA",18,72.99,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","N1V V71R S147W",3
"lib2","SARS-CoV-2","CCGATGTCGATCTAAC",15,214.61,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4Y Y39I V71H K132V Y175G",5
"lib2","SARS-CoV-2","CCGATGTCTAGAATTC",2,25.63,6,-4.84,0.68,1.5,1.08,0.01,">1 nonsynonymous","A81N G86N",2
"lib2","SARS-CoV-2","CCGATGTGACTGAACA",3,28.77,10.77,-0.07,0.03,2.98,1.03,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","CCGATTACACACTAGG",3,35.31,6.59,-4.24,0.18,1.75,1.09,0,">1 nonsynonymous","C31Y T46Y K87E K114L T140V E154L T201Q",7
"lib2","SARS-CoV-2","CCGATTATTCCTGAAC",1,33.12,10.93,0.1,0.07,2.98,1.04,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","CCGATTCACTACCGGG",5,32.53,10.14,-0.7,0.06,2.87,1,0,">1 nonsynonymous","L60C F185I",2
"lib2","SARS-CoV-2","CCGATTCACTGGAATA",2,12.18,7.24,-3.59,0.5,1.5,1.02,0.04,">1 nonsynonymous","Y91R N157T",2
"lib2","SARS-CoV-2","CCGATTCATAAATAGT",3,18.68,6.96,-3.88,0.52,1.5,1.09,0.07,">1 nonsynonymous","T63P V103R",2
"lib2","SARS-CoV-2","CCGATTCATCAGCAGT",12,129.11,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I2T G9K F17E Y119V V173T",5
"lib2","SARS-CoV-2","CCGATTCCAGTCAAAT",3,20.11,8.73,-2.11,0.3,1.5,1,0.07,">1 nonsynonymous","K56M P82Q I142L",3
"lib2","SARS-CoV-2","CCGATTCGATCCTGAG",2,7.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E G152Y V153I",3
"lib2","SARS-CoV-2","CCGATTGAATTTATGT",4,65.25,10.56,-0.28,0.05,2.91,1.08,0,">1 nonsynonymous","N40W K198L",2
"lib2","SARS-CoV-2","CCGATTGACAGATATG",1,0,NA,NA,NA,NA,NA,NA,"stop","T85* K132S",2
"lib2","SARS-CoV-2","CCGATTGGTGCCTTAA",6,65.67,10.89,0.06,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGATTTACAATTTCA",2,19.47,10.44,-0.39,0.09,2.81,1.14,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","CCGATTTTAAAGAAAC",3,21.88,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4S V37C Q84C K114N Y143I T148N",6
"lib2","SARS-CoV-2","CCGATTTTGGATTGAC",2,36.76,6.33,-4.51,0.39,1.5,1.14,0.01,">1 nonsynonymous","L5R N40S C150L",3
"lib2","SARS-CoV-2","CCGCAAAAAAAATATA",1,50.99,10.77,-0.06,0.05,2.93,1.1,0,">1 nonsynonymous","Q84G F160N",2
"lib2","SARS-CoV-2","CCGCAAAACCTGAAAC",13,223.16,10.74,-0.1,0.04,2.95,1.03,0,">1 nonsynonymous","S36M N64H",2
"lib2","SARS-CoV-2","CCGCAAACAGCTGACC",5,63.81,9.06,-1.77,0.06,2.9,1.1,0,">1 nonsynonymous","R16Y G166L",2
"lib2","SARS-CoV-2","CCGCAAACATTCCTTC",2,21.2,6.27,-4.56,0.64,2.05,1.17,0.02,">1 nonsynonymous","C61G L183G",2
"lib2","SARS-CoV-2","CCGCAAACCAAAAAGG",4,13.91,9.87,-0.96,0.09,2.66,1.22,0.01,"1 nonsynonymous","Y123I",1
"lib2","SARS-CoV-2","CCGCAAATAACGTCCC",13,117.72,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R124P Q176M",2
"lib2","SARS-CoV-2","CCGCAAATGCAGGTGT",15,91.08,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27G L38D L57C D90H S113Y S139Q V173G",7
"lib2","SARS-CoV-2","CCGCAAATGGAATGGG",1,25.04,10.92,0.08,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCAACCTACAATGA",5,53.47,10.25,-0.59,0.06,2.93,1.02,0,">1 nonsynonymous","N4F K114T E141T",3
"lib2","SARS-CoV-2","CCGCAACTACTTTAAA",1,23.81,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S113V F167T",2
"lib2","SARS-CoV-2","CCGCAACTCGACCATG",3,95.46,10.87,0.04,0.06,2.93,1.08,0,">1 nonsynonymous","R16N D90R",2
"lib2","SARS-CoV-2","CCGCAAGAAACGCATG",5,11.8,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15A D68R W106E Y143C",4
"lib2","SARS-CoV-2","CCGCAAGATTAGAAAT",16,6.45,NA,NA,NA,NA,NA,NA,"stop","E10F T46* V65M R179*",4
"lib2","SARS-CoV-2","CCGCAAGCGTGAGATA",7,197.59,9.35,-1.49,0.08,2.45,1.07,0,">1 nonsynonymous","A22E R27C Q176M",3
"lib2","SARS-CoV-2","CCGCAAGTATTAAATA",9,12.32,NA,NA,NA,NA,NA,NA,"stop","K114* G146Q K198*",3
"lib2","SARS-CoV-2","CCGCAAGTGACATTAG",3,34.97,10.13,-0.71,0.06,2.8,1.03,0,">1 nonsynonymous","T3L L57S",2
"lib2","SARS-CoV-2","CCGCAAGTTAACGGAG",10,80.96,9.63,-1.2,0.05,1.94,1.1,0,">1 nonsynonymous","T3S L95C A190V",3
"lib2","SARS-CoV-2","CCGCAATAGTCAATAC",2,43.16,8.71,-2.13,0.1,1.89,1.08,0,">1 nonsynonymous","N24K D34Y P96T S184H",4
"lib2","SARS-CoV-2","CCGCAATATACAACAC",3,48.3,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F70A E135Y Y143G",3
"lib2","SARS-CoV-2","CCGCAATGGAAGGGTC",2,32.48,10.53,-0.31,0.09,2.84,1.1,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","CCGCAATGGTTACCTA",11,3.4,NA,NA,NA,NA,NA,NA,"stop","T3L N30W Y39* K48W G101Y Y143E",6
"lib2","SARS-CoV-2","CCGCAATTAACGTTAA",3,57.81,6.95,-3.89,0.44,1.5,1.13,0.04,">1 nonsynonymous","D97N C150R L187D",3
"lib2","SARS-CoV-2","CCGCAATTAGTAAAGG",6,230.4,10.81,-0.02,0.04,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGCACAAATCCAACC",4,45.01,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V32N V103C L122S N130R S147P L162S",6
"lib2","SARS-CoV-2","CCGCACAACCGTTGAG",4,94.99,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R16L F44K C61N F70V",4
"lib2","SARS-CoV-2","CCGCACACCATCTTAA",2,10.13,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","A22P",1
"lib2","SARS-CoV-2","CCGCACACTATTTTCA",2,6.84,8.7,-2.13,0.43,2.08,1.3,0.04,">1 nonsynonymous","L5F A33M I88F C150E",4
"lib2","SARS-CoV-2","CCGCACAGAAAAATGA",3,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K T85H D98I Y165V G172R",5
"lib2","SARS-CoV-2","CCGCACAGGTGTATCG",7,59.41,10.98,0.14,0.14,2.87,1.02,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCGCACATGGAAGAAC",3,37.7,8.65,-2.19,0.08,1.98,1.05,0,">1 nonsynonymous","F8N R27Y",2
"lib2","SARS-CoV-2","CCGCACCCACTTAAAC",10,111.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F70V R136C Y175P",3
"lib2","SARS-CoV-2","CCGCACCTTAATACGG",16,231.81,10.87,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCACGAGTACTTAA",3,73.85,9.92,-0.92,0.09,2.11,1.11,0,">1 nonsynonymous","S41M W106S",2
"lib2","SARS-CoV-2","CCGCACGTAAAACACT",7,18.4,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","F12K L95S D137V G155C K198P",5
"lib2","SARS-CoV-2","CCGCACTAACATCGAG",6,126.42,10.88,0.05,0.06,2.87,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGCACTAATTAGTAC",6,58.8,9.68,-1.16,0.08,2.34,1.08,0,">1 nonsynonymous","T63H N92S",2
"lib2","SARS-CoV-2","CCGCACTAGAGAAGTT",10,37.27,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","Y50S D90Y",2
"lib2","SARS-CoV-2","CCGCACTATCGAGCGC",10,46.05,6.78,-4.05,0.51,1.5,1.16,0.04,">1 nonsynonymous","C6R F134I V182P",3
"lib2","SARS-CoV-2","CCGCACTCTCATGTAT",4,70.3,6,-4.84,1.71,1.5,1.14,0.01,">1 nonsynonymous","S19R G86T",2
"lib2","SARS-CoV-2","CCGCACTGATTAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P82* Y123S",2
"lib2","SARS-CoV-2","CCGCAGAATGTTGTCA",10,65.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R78G G101S R127I",3
"lib2","SARS-CoV-2","CCGCAGAGGACTCACT",7,60.94,10.47,-0.36,0.05,2.85,1.14,0,">1 nonsynonymous","R16F T63A Y175F A190R",4
"lib2","SARS-CoV-2","CCGCAGATTCTTTAAA",7,77.64,6,-4.84,1.2,1.5,1.19,0.02,">1 nonsynonymous","S19E G86Q",2
"lib2","SARS-CoV-2","CCGCAGCATAAGGAAT",2,35.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V11D L38P D112H",3
"lib2","SARS-CoV-2","CCGCAGGAAAGTACGG",4,69.5,9.87,-0.96,0.05,2.82,1.07,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","CCGCAGGCTTAGCCAA",8,43.02,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C49L K94I Y143L G174R",4
"lib2","SARS-CoV-2","CCGCAGTATGAGAAAC",2,26.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I88R S113V F126I T140W C150G R179S",6
"lib2","SARS-CoV-2","CCGCAGTCACACGATG",2,151.3,6,-4.84,1.09,1.5,1.18,0.02,">1 nonsynonymous","Y175P L188I",2
"lib2","SARS-CoV-2","CCGCAGTCATGAACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","N64* D137R",2
"lib2","SARS-CoV-2","CCGCATAACCGATTCC",9,63.59,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y50F D68W V77G P161L",4
"lib2","SARS-CoV-2","CCGCATACAACTAATC",4,111.56,10.86,0.03,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCATACCAAAGACA",7,92.67,10.02,-0.82,0.06,2.37,1.12,0,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","CCGCATACTGCATCTA",2,29.4,9.51,-1.33,0.12,1.84,1.13,0.01,">1 nonsynonymous","D59N G83C D90V",3
"lib2","SARS-CoV-2","CCGCATATCTTCACAT",2,94.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R78I K94D K132V",3
"lib2","SARS-CoV-2","CCGCATGACTTGGACA",6,19.68,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3K V71W R127V",3
"lib2","SARS-CoV-2","CCGCATTAGGCCTAAA",7,163.78,7.55,-3.29,0.13,1.91,1.13,0.01,">1 nonsynonymous","Y123C E141G Y175Q",3
"lib2","SARS-CoV-2","CCGCATTGTACAGTTC",7,2.07,NA,NA,NA,NA,NA,NA,"stop","D59T V65I R127L F167*",4
"lib2","SARS-CoV-2","CCGCATTTTATTACTA",10,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G G86Y S139T",3
"lib2","SARS-CoV-2","CCGCCAAAGTTAACAC",3,24.53,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S45W G86W L122E P133T T201K",5
"lib2","SARS-CoV-2","CCGCCAACAATCTAAC",3,1.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","CCGCCAACCATCGAGT",6,0.67,NA,NA,NA,NA,NA,NA,"stop","C6F T15* G116T D137L P197I",5
"lib2","SARS-CoV-2","CCGCCAACCTCGAAAC",7,13.25,6,-4.84,1.66,1.5,1.09,0.03,">1 nonsynonymous","T3R W23R T55S D75F",4
"lib2","SARS-CoV-2","CCGCCAATAACAGAAT",3,50.1,10,-0.84,0.05,2.68,1.06,0,">1 nonsynonymous","A22E D34Y",2
"lib2","SARS-CoV-2","CCGCCACACTTACCGT",14,211.96,9.89,-0.94,0.04,2.91,1.06,0,">1 nonsynonymous","L5D G146N",2
"lib2","SARS-CoV-2","CCGCCAGAGATGCGCA",8,0.35,NA,NA,NA,NA,NA,NA,"stop","N92* P133G P149T",3
"lib2","SARS-CoV-2","CCGCCATAAAATATGC",5,71.75,8.41,-2.42,0.2,1.5,1.14,0.01,">1 nonsynonymous","R16V S19Y",2
"lib2","SARS-CoV-2","CCGCCATGAATAATGA",1,81.52,9.4,-1.44,0.09,2.44,1.1,0,">1 nonsynonymous","N4G K87G F134R",3
"lib2","SARS-CoV-2","CCGCCATGCTAGCGGG",7,79.61,6.29,-4.55,0.81,1.5,1.21,0.03,">1 nonsynonymous","N110P G117V R136S",3
"lib2","SARS-CoV-2","CCGCCATGGAAAGAAC",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18F I88F",2
"lib2","SARS-CoV-2","CCGCCCAACTTCTGGG",6,48.86,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S43P K48I D59I A81S Y175S",5
"lib2","SARS-CoV-2","CCGCCCAGGCGGTACA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","F12L G174*",2
"lib2","SARS-CoV-2","CCGCCCAGGGTAGATA",2,9.35,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A14V Y50A N64M A89P T100K",5
"lib2","SARS-CoV-2","CCGCCCATCCGTGATA",4,74.85,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R124S G166P",2
"lib2","SARS-CoV-2","CCGCCCCACTGTCCAA",4,25.21,8.18,-2.66,0.26,1.59,1.07,0.03,">1 nonsynonymous","N107L P149G",2
"lib2","SARS-CoV-2","CCGCCCCCCCCGGGCC",3,0.09,NA,NA,NA,NA,NA,NA,"stop","S45* P54T A89Y T100R S113P S184Y",6
"lib2","SARS-CoV-2","CCGCCCCCCTACGAGA",2,3.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95A",1
"lib2","SARS-CoV-2","CCGCCCCTAGCTTAAG",7,120,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y39H G51P D90V P149I",4
"lib2","SARS-CoV-2","CCGCCCCTATCAGGCA",2,24.77,6.42,-4.41,0.69,1.5,1.15,0.04,">1 nonsynonymous","L5G L57C A81T A89V G116K",5
"lib2","SARS-CoV-2","CCGCCCGGAGTTCCGA",5,68.9,10.84,0.01,0.07,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCCCTAATCTGCCG",16,91.07,6,-4.84,2,1.5,1.37,0.03,">1 nonsynonymous","S41L Y93T N151Y",3
"lib2","SARS-CoV-2","CCGCCCTATCGCCTAA",1,1.1,NA,NA,NA,NA,NA,NA,"stop","V52P N110T L122* C150G",4
"lib2","SARS-CoV-2","CCGCCCTCCTACTTCC",8,0.77,NA,NA,NA,NA,NA,NA,"stop","K128A N151* G172W",3
"lib2","SARS-CoV-2","CCGCCGAACGCTATGA",1,58.13,9.79,-1.05,0.05,2.94,1.06,0,">1 nonsynonymous","T3H N64Q K87E",3
"lib2","SARS-CoV-2","CCGCCGACCTCAACCC",3,27.77,9.8,-1.04,0.16,2.12,1.07,0.01,">1 nonsynonymous","Y35R S45R",2
"lib2","SARS-CoV-2","CCGCCGGGAATCAGGG",15,95.92,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G86M F99G A105V L122S",4
"lib2","SARS-CoV-2","CCGCCGTGAAAAACTA",6,80.55,10.7,-0.14,0.04,2.92,1.05,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","CCGCCTAAGAGCCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H Y35V F62N D98A",4
"lib2","SARS-CoV-2","CCGCCTCACAACCCCC",5,91.69,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V77F Q176T",2
"lib2","SARS-CoV-2","CCGCCTCCCACGATAT",9,68.69,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S41P G51A Y91P N151T",4
"lib2","SARS-CoV-2","CCGCCTGCCCTTACAG",4,49.56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20R C31M D68E",3
"lib2","SARS-CoV-2","CCGCCTGCTTCCTTTA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S41* R127N",2
"lib2","SARS-CoV-2","CCGCCTGCTTTGAAGT",2,19.65,9.95,-0.89,0.12,2.49,1.07,0.01,">1 nonsynonymous","P96N D98H V173Q T201P",4
"lib2","SARS-CoV-2","CCGCCTTCTCACGATG",2,0,NA,NA,NA,NA,NA,NA,"stop","V32E F47I L57Y V65* S129D N157S",6
"lib2","SARS-CoV-2","CCGCCTTGATTCAGTT",14,190.23,10.83,-0.01,0.04,2.89,1.11,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","CCGCGAAAATTAAGAT",1,44.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14V V32P F99L C158F",4
"lib2","SARS-CoV-2","CCGCGAAACCCAACTT",4,68.39,10.27,-0.56,0.04,2.95,1.05,0,">1 nonsynonymous","D90Y N151G",2
"lib2","SARS-CoV-2","CCGCGAAATTAGTGAG",2,34.75,10.89,0.05,0.06,2.91,1.11,0,"1 nonsynonymous","V32I",1
"lib2","SARS-CoV-2","CCGCGAACGTCATCCA",1,10.49,6.64,-4.2,0.56,1.5,1.06,0.06,">1 nonsynonymous","N1D S36G R73S G86C",4
"lib2","SARS-CoV-2","CCGCGAATTAGACAAC",4,40.81,10.84,0.01,0.07,2.89,1.13,0,">1 nonsynonymous","Y39F D59S L122V",3
"lib2","SARS-CoV-2","CCGCGACACAAGGATG",11,52.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K94L Y143I T170S",3
"lib2","SARS-CoV-2","CCGCGACTCCCGGCGC",1,11.18,8.61,-2.22,0.32,1.5,1,0.03,">1 nonsynonymous","F17T D112L K199M",3
"lib2","SARS-CoV-2","CCGCGAGAACAAACTA",4,35.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40S T85F F99C Y119T",4
"lib2","SARS-CoV-2","CCGCGAGCAATTGACA",7,36.72,10.73,-0.11,0.04,2.99,1,0,">1 nonsynonymous","T100F G196D",2
"lib2","SARS-CoV-2","CCGCGAGGAACTGTTA",3,85.55,10.46,-0.38,0.05,2.95,1.01,0,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","CCGCGAGTTGAGGTAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G R78F",2
"lib2","SARS-CoV-2","CCGCGATAATAAACGC",3,56.11,9.85,-0.98,0.13,2.28,1,0.01,">1 nonsynonymous","L38S N130L L188T",3
"lib2","SARS-CoV-2","CCGCGATACTTTTAGA",3,60.65,10.58,-0.26,0.06,2.93,1.05,0,">1 nonsynonymous","V37L T170S",2
"lib2","SARS-CoV-2","CCGCGATAGCTCATTG",14,148.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39S A89L K114C L122S",4
"lib2","SARS-CoV-2","CCGCGCAAATAAGTAA",3,82.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60P A105S D137W",3
"lib2","SARS-CoV-2","CCGCGCAGCCTAAAAA",6,47.64,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10S F62I Y93R S200W",4
"lib2","SARS-CoV-2","CCGCGCCGACCGCAAC",3,39.85,9.73,-1.1,0.08,2.85,1.09,0,">1 nonsynonymous","N110E K132H A145Q",3
"lib2","SARS-CoV-2","CCGCGCCTACAAATGG",4,31.93,10.85,0.02,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCGCCTTTCTTGGC",1,26.84,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R124T F156M V173F L187K K198G",5
"lib2","SARS-CoV-2","CCGCGCGCGACTAACA",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57C V77N C158S",3
"lib2","SARS-CoV-2","CCGCGCGCTTCAACCT",2,23.88,6,-4.84,2,1.5,1.23,0.05,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","CCGCGCGTGCCCTCGC",18,267.76,10.82,-0.02,0.03,2.95,1.05,0,">1 nonsynonymous","A18H Y39V",2
"lib2","SARS-CoV-2","CCGCGCTCTAATGGTT",12,94.66,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V20E Y39F Q84A I104F",4
"lib2","SARS-CoV-2","CCGCGGACACCGATGC",8,177.2,10.13,-0.71,0.06,2.68,1.02,0,"1 nonsynonymous","Q79R",1
"lib2","SARS-CoV-2","CCGCGGTTTACTACGT",6,128.79,10.81,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","V37H",1
"lib2","SARS-CoV-2","CCGCGTAACACCTAAC",1,8.59,10.26,-0.57,0.11,2.87,1.08,0,">1 nonsynonymous","A81T K199I",2
"lib2","SARS-CoV-2","CCGCGTATTTACTTTG",2,48.26,10.78,-0.06,0.05,2.89,1.05,0,"1 nonsynonymous","S200D",1
"lib2","SARS-CoV-2","CCGCGTCCCTAATACC",7,21.14,8.41,-2.42,0.25,1.91,1.09,0.03,">1 nonsynonymous","N13K I88M L125S F160H",4
"lib2","SARS-CoV-2","CCGCGTGGGGCGAATA",12,216.73,8.14,-2.7,0.13,2.08,1.08,0.01,">1 nonsynonymous","A105S N157C",2
"lib2","SARS-CoV-2","CCGCGTTCAGAGAAAA",11,78.09,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T55K D90S F99I P169E",4
"lib2","SARS-CoV-2","CCGCGTTGAAGATAAG",1,19.73,10.72,-0.11,0.05,3,1.03,0,">1 nonsynonymous","S43L K94R L122R",3
"lib2","SARS-CoV-2","CCGCTAAAATTACTCG",11,80.83,6.11,-4.73,0.64,1.5,1.11,0.01,">1 nonsynonymous","F17C T55V N64G R136S",4
"lib2","SARS-CoV-2","CCGCTAAAGCTAAATT",6,53.07,8.46,-2.38,0.13,2.37,1.1,0.01,">1 nonsynonymous","A105T I142R",2
"lib2","SARS-CoV-2","CCGCTAAAGGATACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","P54L N107W F167*",3
"lib2","SARS-CoV-2","CCGCTAAAGTTTCTAA",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57A T85V N107H S113C",4
"lib2","SARS-CoV-2","CCGCTAACCCTACCCA",3,125.63,8.28,-2.55,0.11,2.4,1.1,0,">1 nonsynonymous","A81S D98V Q168D",3
"lib2","SARS-CoV-2","CCGCTAACTCTGCTAA",2,2.25,NA,NA,NA,NA,NA,NA,"stop","N4M I28T P96* A105M G146R F156L",6
"lib2","SARS-CoV-2","CCGCTAATAACACAGT",2,95.84,8.44,-2.4,0.12,2.81,1.11,0.01,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","CCGCTAATATTACATG",9,121.45,10.73,-0.1,0.05,2.84,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCTAATGATGTTAT",14,266.88,8.77,-2.06,0.05,2.99,1.07,0,">1 nonsynonymous","I2C E10S F156S G166A",4
"lib2","SARS-CoV-2","CCGCTACAAAAACAAA",5,65.88,10.82,-0.02,0.06,2.96,1.04,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","CCGCTACCCCTCCGCT",8,233.46,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5R V32N F99G N151K S164C Y178P",6
"lib2","SARS-CoV-2","CCGCTACGTACTTAAG",2,6.76,9.85,-0.99,0.25,2.56,1,0.01,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","CCGCTAGCACAATATG",8,141.12,10.74,-0.1,0.03,2.93,1.07,0,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","CCGCTAGCGTACTATG",2,14.3,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A18V C49L K114V",3
"lib2","SARS-CoV-2","CCGCTATAAATACTAC",3,0.41,NA,NA,NA,NA,NA,NA,"stop","S41* Y91D V173L V181T",4
"lib2","SARS-CoV-2","CCGCTATAGTTATCAT",4,59.78,8.8,-2.04,0.2,1.5,1.08,0.02,"1 nonsynonymous","A89D",1
"lib2","SARS-CoV-2","CCGCTATTAGATGTGC",3,8.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F70K P169L R179S",3
"lib2","SARS-CoV-2","CCGCTCAAGAGAGCAG",1,34.05,10.74,-0.1,0.09,2.92,1.03,0,"1 nonsynonymous","K132F",1
"lib2","SARS-CoV-2","CCGCTCATAACTTATG",7,81.35,7.51,-3.33,0.13,1.82,1.1,0.01,">1 nonsynonymous","A33M P54H A105S E154R Y159V",5
"lib2","SARS-CoV-2","CCGCTCATGAACAAGA",17,156.39,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","Y35L P54F D112N Y121N G146T",5
"lib2","SARS-CoV-2","CCGCTCATGCGGAATT",2,21.78,10.78,-0.06,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGCTCCACTCAAAAC",4,7.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N G83L I88F",3
"lib2","SARS-CoV-2","CCGCTCCAGGCAGTAT",17,105.93,6,-4.84,1.28,1.5,1.16,0.01,">1 nonsynonymous","E10I F44Y T85A D90V P133H",5
"lib2","SARS-CoV-2","CCGCTCCTATAGACAT",6,10.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8E N13M F62S I88R",4
"lib2","SARS-CoV-2","CCGCTCCTGCTGCAGC",3,125.87,10.14,-0.7,0.07,2.59,1.01,0,">1 nonsynonymous","L57K S129G",2
"lib2","SARS-CoV-2","CCGCTCGAGATACTCG",4,120.89,10.34,-0.5,0.03,2.98,1.04,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","CCGCTCGCTATTACGA",1,27.1,10.41,-0.43,0.09,2.72,1.09,0.01,">1 nonsynonymous","S41T P96K L122R",3
"lib2","SARS-CoV-2","CCGCTCTAATTTCGGA",2,19.46,6,-4.84,1.23,3,1.09,0.01,">1 nonsynonymous","Y50K F99T",2
"lib2","SARS-CoV-2","CCGCTCTTATACAATA",13,82.84,8.09,-2.75,0.16,2.03,1.08,0.01,">1 nonsynonymous","C6I T15S S41M I142F F156T",5
"lib2","SARS-CoV-2","CCGCTGAAGATACATA",3,66.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10D T85A P96M P161F",4
"lib2","SARS-CoV-2","CCGCTGACACTGGACG",5,59.91,10.85,0.01,0.06,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGCTGAGACTAACAG",1,31.41,10.17,-0.67,0.06,2.76,1.04,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","CCGCTGATTAGCATAT",6,129.63,10.79,-0.05,0.04,2.92,1.11,0,"1 nonsynonymous","S41Q",1
"lib2","SARS-CoV-2","CCGCTGCAATCAGGAC",3,50.26,10.69,-0.15,0.03,3,1,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","CCGCTGCAGGGAATTA",1,48.35,9.6,-1.23,0.11,2.22,1.02,0.01,">1 nonsynonymous","F17L H189R",2
"lib2","SARS-CoV-2","CCGCTGCATGCAGGGG",9,97.06,10.65,-0.18,0.04,2.97,1.05,0,"1 nonsynonymous","F47V",1
"lib2","SARS-CoV-2","CCGCTGGACCTATAAT",5,0.17,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","CCGCTGTCTATGATTG",10,144.97,9.75,-1.09,0.07,2.21,1.05,0,">1 nonsynonymous","K48G C61T",2
"lib2","SARS-CoV-2","CCGCTTAAGGTGATAA",7,80.21,9.84,-1,0.07,2.29,1.06,0,">1 nonsynonymous","V11S T201G",2
"lib2","SARS-CoV-2","CCGCTTAATTATTCTC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39D S45F N120* V194L",4
"lib2","SARS-CoV-2","CCGCTTATATACAAAA",3,88.54,10.84,0,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGCTTCCAAAGATAA",9,88.32,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S19I N64L T148W",3
"lib2","SARS-CoV-2","CCGCTTCTTTAAACCT",11,96.59,8.91,-1.92,0.08,1.87,1.12,0,">1 nonsynonymous","F62D D90S G116Y",3
"lib2","SARS-CoV-2","CCGCTTGTCCCGCCAA",8,41.82,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y93T G166Q",2
"lib2","SARS-CoV-2","CCGCTTTAAAGATACA",1,16.33,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","C158L G174P",2
"lib2","SARS-CoV-2","CCGCTTTCGATGTCTG",9,39.02,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4K A14T Y91V Y119M G152Q Q163G",6
"lib2","SARS-CoV-2","CCGGAAAAATAAAACA",1,9.18,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A81M P133L Y143P L162F",4
"lib2","SARS-CoV-2","CCGGAAAAATAAATCA",4,68.06,6.63,-4.2,0.53,1.64,1.14,0.04,">1 nonsynonymous","S43P F62S N64S Y119L P177K T201Y",6
"lib2","SARS-CoV-2","CCGGAAAACGCCTAAA",5,48.54,8.22,-2.61,0.2,1.53,1.1,0.01,">1 nonsynonymous","K87V A105H G152I",3
"lib2","SARS-CoV-2","CCGGAAAACGCCTACC",2,46.75,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","T15C S113L",2
"lib2","SARS-CoV-2","CCGGAAAATAGACCGA",3,29.11,10.03,-0.81,0.08,2.71,1.02,0,">1 nonsynonymous","R16F S41F Y123C T201H",4
"lib2","SARS-CoV-2","CCGGAAACAATGTGAA",7,0.26,NA,NA,NA,NA,NA,NA,"stop","R16* L38P Y39R F62T T85M",5
"lib2","SARS-CoV-2","CCGGAAACCAGAGCAA",4,124.49,10.48,-0.36,0.03,2.9,1.05,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","CCGGAAAGGTAATTAT",5,72.78,10.52,-0.32,0.03,2.89,1.03,0,">1 nonsynonymous","R27T E141W",2
"lib2","SARS-CoV-2","CCGGAAAGTGAATACT",5,44.51,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T3R Y91A K128L Y165T",4
"lib2","SARS-CoV-2","CCGGAAATCAATCCAT",1,26.71,6.07,-4.77,0.79,1.64,1.16,0.01,">1 nonsynonymous","N64F W106V G166Q",3
"lib2","SARS-CoV-2","CCGGAAATTTAAATCT",8,40.33,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F17L F99S Y121R E135T",4
"lib2","SARS-CoV-2","CCGGAACACAGTGGTA",12,130.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88R I104M",2
"lib2","SARS-CoV-2","CCGGAACACATCCCCA",7,67.96,10.82,-0.01,0.07,2.89,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGGAACGCATCTCTG",13,185.83,8.42,-2.41,0.11,2.92,1.06,0.01,">1 nonsynonymous","N24T Y175S",2
"lib2","SARS-CoV-2","CCGGAACTATGACATA",9,35.76,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N40L I104S E135A",3
"lib2","SARS-CoV-2","CCGGAAGAGTTGCCTG",1,32.21,10.84,0,0.03,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGGAAGATCTATTCT",1,7.19,10.61,-0.23,0.08,2.97,1,0,">1 nonsynonymous","I28W S41I",2
"lib2","SARS-CoV-2","CCGGAAGGGTTACGCA",1,33.64,8.95,-1.89,0.14,2.02,1.04,0.01,">1 nonsynonymous","N13K D59L T148P",3
"lib2","SARS-CoV-2","CCGGAATAAGTACGGT",5,66.42,8.93,-1.9,0.06,2.87,1.14,0,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","CCGGAATACAAGCTAT",8,124.76,10.86,0.02,0.05,2.93,1.08,0,">1 nonsynonymous","I2D T100Q S129T",3
"lib2","SARS-CoV-2","CCGGAATTTATAGAAC",7,98.27,8.07,-2.76,0.15,2.38,1.14,0.01,">1 nonsynonymous","V37Y F160R G172S",3
"lib2","SARS-CoV-2","CCGGACAAGAAATGCC",7,188.9,6,-4.84,2,1.5,1.16,0,"1 nonsynonymous","A67P",1
"lib2","SARS-CoV-2","CCGGACACTTATGCAG",9,74.35,10.88,0.05,0.05,2.91,1.11,0,">1 nonsynonymous","R27T P197R",2
"lib2","SARS-CoV-2","CCGGACCTAATGACCT",10,126.09,10.34,-0.49,0.03,2.89,1.1,0,">1 nonsynonymous","C6D T55S",2
"lib2","SARS-CoV-2","CCGGACCTATACCCAC",3,94.16,10.81,-0.03,0.06,2.94,1.08,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","CCGGACTACATCTGTC",14,166.33,10.78,-0.05,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGGACTGGTGCACAA",2,2.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","CCGGAGACATGTAACG",3,81.01,10.04,-0.79,0.04,2.77,1.08,0,">1 nonsynonymous","S19A S129Y",2
"lib2","SARS-CoV-2","CCGGAGACCTAGTTCG",3,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86H N151T",2
"lib2","SARS-CoV-2","CCGGAGATCCGGATAG",2,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R P197Q",2
"lib2","SARS-CoV-2","CCGGAGCCCCGATTAT",1,17.76,8.32,-2.52,0.16,2.29,1.14,0.01,">1 nonsynonymous","Y35W Q84D T100L T170L",4
"lib2","SARS-CoV-2","CCGGAGGAACTAGCCA",4,38.33,10.78,-0.06,0.05,2.85,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGGAGGCCTTCCTTA",8,3.06,NA,NA,NA,NA,NA,NA,"stop","V37R N64R I142L Y159*",4
"lib2","SARS-CoV-2","CCGGAGGGAAAATTGA",4,0.98,NA,NA,NA,NA,NA,NA,"stop","N109M L131R N157H V173*",4
"lib2","SARS-CoV-2","CCGGAGGGGAGGCAAG",2,31.61,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V37A G86N C102G L125S Y159S",5
"lib2","SARS-CoV-2","CCGGAGGTTAGCATAA",3,6.62,10.86,0.03,0.14,2.79,1.21,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCGGAGTAAATTCCCT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","D34L F44I R127* C150R",4
"lib2","SARS-CoV-2","CCGGAGTGGTTAATGT",1,19.64,10.83,-0.01,0.2,2.69,1.08,0.01,"1 nonsynonymous","A18Y",1
"lib2","SARS-CoV-2","CCGGATAACAGATTAT",2,11.34,10.28,-0.55,0.21,2.08,1.04,0.02,">1 nonsynonymous","A22S A89H",2
"lib2","SARS-CoV-2","CCGGATACCGGAGGTA",3,31.09,8.18,-2.66,0.16,2.3,1.04,0.01,">1 nonsynonymous","N1Y T15K G117S P169H",4
"lib2","SARS-CoV-2","CCGGATACTGGGGGAA",5,66.68,10.86,0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGGATAGATGTGGGA",4,4.51,NA,NA,NA,NA,NA,NA,"stop","Y21* L60F Y93Q",3
"lib2","SARS-CoV-2","CCGGATATTCGAATAA",5,90.44,10.5,-0.34,0.05,2.9,1.09,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","CCGGATCGGTAACAAT",2,18.6,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","T85K V103M V181N T201Q",4
"lib2","SARS-CoV-2","CCGGATCTCACACATT",1,32.41,9.83,-1.01,0.05,3,1,0,"1 nonsynonymous","G116C",1
"lib2","SARS-CoV-2","CCGGATGACTCACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K132* C158T",2
"lib2","SARS-CoV-2","CCGGATGTTAGCCGTT",1,8.72,8.71,-2.13,0.48,1.5,1,0.07,"1 nonsynonymous","L162D",1
"lib2","SARS-CoV-2","CCGGATTAATATCATG",2,0,NA,NA,NA,NA,NA,NA,"stop","F44L I72K T201*",3
"lib2","SARS-CoV-2","CCGGATTCAGACAAAT",14,168.75,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","E10L L38S F47L T55F L125K",5
"lib2","SARS-CoV-2","CCGGATTTACCTCGTT",3,13.15,6,-4.84,2,1.5,1.4,0.07,">1 nonsynonymous","K26N Y39M Y50L N64S",4
"lib2","SARS-CoV-2","CCGGATTTTATGCCTG",12,42.09,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C31W C49F T55D L95N Y143Q R179G",6
"lib2","SARS-CoV-2","CCGGCAAAATGACCTT",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K T63W G83Q",3
"lib2","SARS-CoV-2","CCGGCAAAATTACCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35T S45K F62L P96*",4
"lib2","SARS-CoV-2","CCGGCAAGAAACTCAT",8,43.12,9.92,-0.92,0.09,2.43,1.01,0,">1 nonsynonymous","S45V I104C",2
"lib2","SARS-CoV-2","CCGGCAATATTGGCTT",28,209.68,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R25H A33K N40R A105L F156A",5
"lib2","SARS-CoV-2","CCGGCACACCAAAGGT",1,17.3,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F12K V37R D59L F70P",4
"lib2","SARS-CoV-2","CCGGCACCAGATCCCA",4,2.95,NA,NA,NA,NA,NA,NA,"stop","S43C Y50F D59* G146N K199S",5
"lib2","SARS-CoV-2","CCGGCACCCATTAGGA",2,20.1,8.19,-2.65,0.26,2.15,1.16,0.02,">1 nonsynonymous","C6S T55L Y119L",3
"lib2","SARS-CoV-2","CCGGCACTAAAAATAA",1,31.15,10.81,-0.02,0.14,2.69,1.15,0.01,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","CCGGCACTACCTACTT",12,48.4,6.68,-4.15,0.44,1.5,1.16,0.03,">1 nonsynonymous","T3I Q84L N92V V173L P177K",5
"lib2","SARS-CoV-2","CCGGCATAAATTCGAT",5,12.08,10.72,-0.12,0.1,2.81,1.17,0,">1 nonsynonymous","K56T T63V",2
"lib2","SARS-CoV-2","CCGGCATTAGAGAAGG",1,24.67,10.24,-0.6,0.06,2.73,1.12,0,">1 nonsynonymous","K94A K128G",2
"lib2","SARS-CoV-2","CCGGCCAACATTCGCA",1,17.05,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S19K S45N N64F G152P R179K",5
"lib2","SARS-CoV-2","CCGGCCATTTAAAAAA",6,23.19,8.5,-2.34,0.12,1.94,1.11,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","CCGGCGAATAGCTGGT",5,80.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4F A18M G51R F62N D68L G74R Q84V E141S N157T G166V",10
"lib2","SARS-CoV-2","CCGGCGACTAAGGTTC",5,48.14,9.54,-1.3,0.06,1.93,1.05,0,">1 nonsynonymous","C49Y K87F",2
"lib2","SARS-CoV-2","CCGGCGATATAATCCA",6,54.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P7V D90H N110Q C150D",4
"lib2","SARS-CoV-2","CCGGCGGGGTGGATCC",8,74.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68L F99R N118M P133R",4
"lib2","SARS-CoV-2","CCGGCGGTACAGCTAG",14,89.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4S Y39W G51Y G146I T170M T201L",6
"lib2","SARS-CoV-2","CCGGCGTTTGAGCCAG",2,13.39,10.78,-0.06,0.05,2.87,1.17,0,"1 nonsynonymous","F160W",1
"lib2","SARS-CoV-2","CCGGCTTACCAAGTCA",7,131.23,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F126A E141P T148D T170F",4
"lib2","SARS-CoV-2","CCGGCTTTGACTACCC",2,53.19,10.21,-0.63,0.08,2.84,1.05,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CCGGGAAACTATGTTT",11,284.78,10.08,-0.75,0.05,2.77,1.04,0,">1 nonsynonymous","F44H G83A",2
"lib2","SARS-CoV-2","CCGGGACAAACACATT",2,7.08,6.94,-3.9,0.54,1.5,1,0.03,">1 nonsynonymous","W106L F160Y F185K",3
"lib2","SARS-CoV-2","CCGGGAGCAGACAATT",4,123.19,7.91,-2.92,0.15,1.77,1.12,0.01,">1 nonsynonymous","K87T C102L I142R",3
"lib2","SARS-CoV-2","CCGGGAGCTTTTCAAA",8,89.51,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86H T100S Y119R V153Y Y165L",5
"lib2","SARS-CoV-2","CCGGGATGCCTAATTG",2,53.07,10.88,0.05,0.12,2.8,1.07,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CCGGGCAACAATAACA",1,18,8.28,-2.55,0.31,1.85,1,0.04,">1 nonsynonymous","E141P Y175D",2
"lib2","SARS-CoV-2","CCGGGCACCAAGGCGG",2,36.27,10.81,-0.02,0.05,2.98,1.03,0,"1 nonsynonymous","I2Y",1
"lib2","SARS-CoV-2","CCGGGCATATATCTAG",9,183.45,10.33,-0.5,0.03,2.91,1.04,0,">1 nonsynonymous","S41L I138S T148S",3
"lib2","SARS-CoV-2","CCGGGCATGAGAGAAC",1,27.65,10.47,-0.37,0.06,2.89,1.07,0,">1 nonsynonymous","K114S K128W",2
"lib2","SARS-CoV-2","CCGGGCCCAAAGCTGA",3,9.96,6,-4.84,2,1.5,1.05,0.04,">1 nonsynonymous","G86T V103M Y175F",3
"lib2","SARS-CoV-2","CCGGGCTACAATTATC",4,9.78,9.52,-1.32,0.11,2.74,1.2,0,">1 nonsynonymous","P54Q L60E N110S Y119H",4
"lib2","SARS-CoV-2","CCGGGCTTTATTGAGG",1,58.03,8.37,-2.47,0.16,2.26,1.12,0.01,">1 nonsynonymous","L5F Q176T",2
"lib2","SARS-CoV-2","CCGGGGATGTTCCTTA",10,44.5,6.01,-4.83,1.53,1.5,1.2,0.05,">1 nonsynonymous","S41P N107L N120P L131I Q144A",5
"lib2","SARS-CoV-2","CCGGGGCATCAACCGG",1,6.25,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S45R G86D P96T",3
"lib2","SARS-CoV-2","CCGGGTAGCGAAAATA",7,41.01,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T46I Y121G F126S N151I Q163K",5
"lib2","SARS-CoV-2","CCGGGTCATACGTCAC",5,2.38,NA,NA,NA,NA,NA,NA,"stop","P54A C61* R124C",3
"lib2","SARS-CoV-2","CCGGGTCCTAGCAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S69E T85* N110G",3
"lib2","SARS-CoV-2","CCGGGTCTTAAGATAA",11,115.65,7.68,-3.15,0.07,1.76,1.07,0,">1 nonsynonymous","F47S T170L",2
"lib2","SARS-CoV-2","CCGGGTGGATGACAAG",2,106.17,7.94,-2.9,0.2,2.3,1.1,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","CCGGGTTAAAGATTCA",1,8.32,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","D34L F126Y Q163P R179G",4
"lib2","SARS-CoV-2","CCGGGTTAAGTAAAAA",4,27.2,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37H T100A D137K N157M",4
"lib2","SARS-CoV-2","CCGGTAAACCTATGAG",1,6.77,NA,NA,NA,NA,NA,NA,"stop","C31* S36Y N58R S113M E141N",5
"lib2","SARS-CoV-2","CCGGTAAGGGCTAAAG",13,113.67,6.09,-4.74,0.72,1.5,1.21,0.02,">1 nonsynonymous","F12H P54G K114C P197R",4
"lib2","SARS-CoV-2","CCGGTACAGTAATCTA",6,81.19,10.78,-0.05,0.05,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGGTACATATTAATC",1,43.45,10.82,-0.02,0.05,2.87,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGGTAGCAGTTTCCA",3,53.36,10.54,-0.3,0.07,3,1.04,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","CCGGTATAATATAGTA",2,7.67,10.99,0.15,0.07,2.95,1.03,0,"1 nonsynonymous","V173M",1
"lib2","SARS-CoV-2","CCGGTCACGCAATTAG",5,22.49,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A42K C102D L122H",3
"lib2","SARS-CoV-2","CCGGTCAGAATATATG",3,131.48,9.42,-1.42,0.03,2.89,1.04,0,">1 nonsynonymous","R73T Q168N",2
"lib2","SARS-CoV-2","CCGGTCTTAATCCTCA",4,0.51,NA,NA,NA,NA,NA,NA,"stop","F44M V71K N118S G146C F160*",5
"lib2","SARS-CoV-2","CCGGTCTTCCACAGCA",2,7.99,10.81,-0.02,0.05,3,1,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CCGGTGAAGACAGAAA",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81F S129I Y165P",3
"lib2","SARS-CoV-2","CCGGTGAAGGAGGATA",4,0.6,NA,NA,NA,NA,NA,NA,"stop","I2T W106*",2
"lib2","SARS-CoV-2","CCGGTGAGCGAGTGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39N G86N C150H",3
"lib2","SARS-CoV-2","CCGGTGATCACATACC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","V11D A105D N107L S129*",4
"lib2","SARS-CoV-2","CCGGTGCAAAGTGTGT",3,5.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15D L57R N107F K114T P197V",5
"lib2","SARS-CoV-2","CCGGTGGGGCTAAAGA",6,109.56,6,-4.84,2,3,1.14,0,">1 nonsynonymous","P7L L57G V77E Q176V",4
"lib2","SARS-CoV-2","CCGGTGTGCGGCGAAT",1,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V K114M R127G",3
"lib2","SARS-CoV-2","CCGGTTAATGAAAAAA",2,60.29,10.71,-0.13,0.03,2.95,1.07,0,">1 nonsynonymous","N58S N109K",2
"lib2","SARS-CoV-2","CCGGTTAGCGTGACGA",13,49.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36C N40W V52H G86S V103S S200K",6
"lib2","SARS-CoV-2","CCGGTTAGTCACACAA",1,11.68,9.28,-1.56,0.13,2.88,1.11,0.01,">1 nonsynonymous","T15N T170G",2
"lib2","SARS-CoV-2","CCGGTTATCCACACCT",5,15.64,10.43,-0.41,0.13,2.78,1,0.01,">1 nonsynonymous","N40V T46M T100L",3
"lib2","SARS-CoV-2","CCGGTTATTAAAAGCA",8,0.38,NA,NA,NA,NA,NA,NA,"stop","N4C S43* F134R",3
"lib2","SARS-CoV-2","CCGGTTCTAGGCATCA",2,7.83,NA,NA,NA,NA,NA,NA,"stop","K87* T201N",2
"lib2","SARS-CoV-2","CCGGTTGTATCAAAAG",9,116.32,10.78,-0.06,0.05,2.95,1.04,0,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","CCGGTTTAACACTATT",8,158.06,6.98,-3.85,0.1,1.87,1.06,0,">1 nonsynonymous","T148P Y175D",2
"lib2","SARS-CoV-2","CCGGTTTGAAATGACA",4,84.23,8.49,-2.35,0.15,2.21,1.04,0.01,">1 nonsynonymous","A14M K132I Q168V",3
"lib2","SARS-CoV-2","CCGGTTTGCGCATAAA",3,9.94,8.92,-1.92,0.16,2.56,1,0.01,">1 nonsynonymous","N58L I142K",2
"lib2","SARS-CoV-2","CCGTAAAAAAGGTTCC",8,81.18,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D68M Y91P S113M A190T",4
"lib2","SARS-CoV-2","CCGTAAAAAGACACAG",11,104.3,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T55N F99Y G116L F167D",4
"lib2","SARS-CoV-2","CCGTAAAACAAAATCC",2,17.16,10.14,-0.7,0.1,2.04,1.06,0.01,">1 nonsynonymous","L5S W106T L122I",3
"lib2","SARS-CoV-2","CCGTAAAGCTACACAG",4,0.61,NA,NA,NA,NA,NA,NA,"stop","Q79R F99T F156S G174* T201C",5
"lib2","SARS-CoV-2","CCGTAAAGTCGTTTTA",3,9.19,9.27,-1.57,0.21,2.46,1.02,0.01,">1 nonsynonymous","C6W Y123M",2
"lib2","SARS-CoV-2","CCGTAAATAAAGCTTC",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R S139W G172W",3
"lib2","SARS-CoV-2","CCGTAAATTCCTGATA",12,50.21,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C6F S45C N58L A81Q",4
"lib2","SARS-CoV-2","CCGTAACAAAAGCGGT",16,188.43,9.31,-1.52,0.04,2.91,1.11,0,">1 nonsynonymous","I2K G166T",2
"lib2","SARS-CoV-2","CCGTAACAATAAGACG",2,5.97,NA,NA,NA,NA,NA,NA,"stop","C61* Y143R",2
"lib2","SARS-CoV-2","CCGTAACATTACAACA",8,5.07,10.55,-0.28,0.23,3,1.03,0.01,">1 nonsynonymous","I2S E10I V77S I142L L188Q",5
"lib2","SARS-CoV-2","CCGTAACCTAGACTCG",9,302.59,9.06,-1.78,0.07,1.98,1.11,0,">1 nonsynonymous","G51T Y143L",2
"lib2","SARS-CoV-2","CCGTAACGAGGATACG",2,0.45,NA,NA,NA,NA,NA,NA,"stop","G9Q Y119*",2
"lib2","SARS-CoV-2","CCGTAACTTCGCCCCC",3,41.21,10.68,-0.15,0.06,3,1.03,0,">1 nonsynonymous","Y39S I104V",2
"lib2","SARS-CoV-2","CCGTAACTTTTCATGT",3,34.74,10.76,-0.07,0.06,2.94,1.06,0,">1 nonsynonymous","K48R T100N T201C",3
"lib2","SARS-CoV-2","CCGTAAGAAAGGCGAA",7,2.9,NA,NA,NA,NA,NA,NA,"stop","N13T A22C D90I D112* Y123V P161N K198R",7
"lib2","SARS-CoV-2","CCGTAAGATACGATCC",3,25.15,6,-4.84,2,2.72,1.21,0.01,">1 nonsynonymous","I72P K128L C158M",3
"lib2","SARS-CoV-2","CCGTAAGGTAACGGCA",1,9.65,6.99,-3.85,0.23,1.5,1.06,0.01,">1 nonsynonymous","P82Q S184R",2
"lib2","SARS-CoV-2","CCGTAAGTATTTACAT",1,15.14,10.36,-0.47,0.09,2.8,1.07,0,">1 nonsynonymous","K48S T85M",2
"lib2","SARS-CoV-2","CCGTAATCCTAAACGG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14D P54* T85Y",3
"lib2","SARS-CoV-2","CCGTAATCGCACGAAC",9,161.64,9.24,-1.59,0.05,2.89,1.12,0,">1 nonsynonymous","T55F K87I L125G",3
"lib2","SARS-CoV-2","CCGTAATCGTGAAAAG",9,93.91,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L57R G101Q N157S",3
"lib2","SARS-CoV-2","CCGTAATGACCACGCC",2,63.8,10.41,-0.43,0.07,2.85,1,0,">1 nonsynonymous","P7S Y178N",2
"lib2","SARS-CoV-2","CCGTAATGCAAGAGAG",14,204.93,10.21,-0.63,0.03,2.94,1,0,">1 nonsynonymous","I28C N151F",2
"lib2","SARS-CoV-2","CCGTACAAATACTTAA",4,43.36,10.61,-0.23,0.05,2.96,1.06,0,">1 nonsynonymous","N120R K128T A190C",3
"lib2","SARS-CoV-2","CCGTACAATACCGAAC",5,58.9,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N58K W106R G155I",3
"lib2","SARS-CoV-2","CCGTACATAGAGGGCG",11,134.94,10.42,-0.42,0.03,2.9,1.03,0,">1 nonsynonymous","T3Q I138P K199L",3
"lib2","SARS-CoV-2","CCGTACATCAGTCAAT",3,21.96,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A81Y R136A T148C",3
"lib2","SARS-CoV-2","CCGTACCAACCCCGTT",2,36.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3P C150E H189L",3
"lib2","SARS-CoV-2","CCGTACCATAACTTGA",4,66.22,10.15,-0.68,0.05,2.77,1.07,0,">1 nonsynonymous","T15V G83L",2
"lib2","SARS-CoV-2","CCGTACCATTAATGGG",5,31.15,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C6R D112Y K114R",3
"lib2","SARS-CoV-2","CCGTACCGCACAATTG",1,0.86,NA,NA,NA,NA,NA,NA,"stop","G83N N107*",2
"lib2","SARS-CoV-2","CCGTACCGCCACCAGG",13,205.9,10.9,0.07,0.05,2.91,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CCGTACCTGGATGATT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","Y21* I88V T148K K198Y",4
"lib2","SARS-CoV-2","CCGTACGATTCTGGCC",4,20.58,6.34,-4.5,0.45,1.5,1.09,0.01,">1 nonsynonymous","S36R F62I P82S N92R G155V",5
"lib2","SARS-CoV-2","CCGTACGCCCCGGACT",6,7.63,NA,NA,NA,NA,NA,NA,"stop","I2V T15M V37A R73P A89D V153* Q163T",7
"lib2","SARS-CoV-2","CCGTACGTATTTCATA",10,76,9.79,-1.05,0.04,2.84,1.09,0,">1 nonsynonymous","T15S F44N T63S",3
"lib2","SARS-CoV-2","CCGTACTACGTCCGAG",4,20.92,9.17,-1.66,0.09,2.5,1,0,">1 nonsynonymous","L5C I138P V153C",3
"lib2","SARS-CoV-2","CCGTACTAGGAACGCC",2,0.26,NA,NA,NA,NA,NA,NA,"stop","G101T C195*",2
"lib2","SARS-CoV-2","CCGTACTAGTAATTAA",4,30.04,6,-4.84,1.43,1.5,1.24,0.03,"1 nonsynonymous","I88K",1
"lib2","SARS-CoV-2","CCGTACTCAACAATAA",8,85.92,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F62G P82R Y91S W106S L122S Y143D P169S",7
"lib2","SARS-CoV-2","CCGTACTTAGTAGTAC",17,227.21,10.01,-0.83,0.05,2.58,1.04,0,"1 nonsynonymous","F185T",1
"lib2","SARS-CoV-2","CCGTACTTTGATGAAA",8,35.74,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","D97C S139I P161S",3
"lib2","SARS-CoV-2","CCGTAGACTAGACAAG",1,39.71,10.44,-0.39,0.05,2.91,1.06,0,">1 nonsynonymous","E141A Q144K",2
"lib2","SARS-CoV-2","CCGTAGCATGTAAATT",2,32.07,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","S113T D137G",2
"lib2","SARS-CoV-2","CCGTAGCCCCCTAAAA",8,161.79,8.67,-2.17,0.07,3,1.07,0,">1 nonsynonymous","V37F G166D",2
"lib2","SARS-CoV-2","CCGTAGTAATGTGTTT",1,3.29,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCGTAGTACCATATTC",2,14.38,8.87,-1.97,0.23,1.75,1.1,0.01,"1 nonsynonymous","R127T",1
"lib2","SARS-CoV-2","CCGTAGTTACCTAAAA",2,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59Q V65G",2
"lib2","SARS-CoV-2","CCGTAGTTCCGGCGAT",1,13.44,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N92M N107R N130D I138G",4
"lib2","SARS-CoV-2","CCGTATACAAGACTCA",3,43.27,10.11,-0.73,0.08,2.5,1.08,0,"1 nonsynonymous","V52D",1
"lib2","SARS-CoV-2","CCGTATATGAGAGTTT",10,94.79,8.61,-2.23,0.21,1.5,1.05,0.02,">1 nonsynonymous","F12Q N64F Q163K",3
"lib2","SARS-CoV-2","CCGTATATTAGATTCC",3,41.23,10.21,-0.63,0.04,3,1,0,">1 nonsynonymous","T3G G9T K87N",3
"lib2","SARS-CoV-2","CCGTATCAAACACAAT",12,63.02,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Q84L L122P",2
"lib2","SARS-CoV-2","CCGTATCCCCTAGTCA",4,77.63,10.3,-0.54,0.04,2.95,1,0,">1 nonsynonymous","G9M Y91F E141I",3
"lib2","SARS-CoV-2","CCGTATGAGTCAAAGT",4,35.76,6,-4.84,2,3,1.2,0,">1 nonsynonymous","T100S D112Q",2
"lib2","SARS-CoV-2","CCGTATGATTACATCC",2,68.58,6,-4.84,2,1.5,1.13,0,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","CCGTATGCCAAGAGAT",11,190.59,8.47,-2.37,0.08,2.64,1.07,0,">1 nonsynonymous","A89T G166L",2
"lib2","SARS-CoV-2","CCGTATGCGCATACCA",12,112.67,10.92,0.09,0.05,2.94,1.08,0,">1 nonsynonymous","Q168F S200R",2
"lib2","SARS-CoV-2","CCGTATTAAAAATAAT",7,36.26,7.65,-3.18,0.64,1.5,1,0.07,">1 nonsynonymous","V20S D34S G101M Y121S Y165T Y178H",6
"lib2","SARS-CoV-2","CCGTATTCAAGCATAT",12,9.2,NA,NA,NA,NA,NA,NA,"stop","G86* I104L",2
"lib2","SARS-CoV-2","CCGTATTGAAATGATA",3,68.8,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14M R25Y I138R P191T",4
"lib2","SARS-CoV-2","CCGTATTTCCTACAAA",3,6.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13C A42V Y165G",3
"lib2","SARS-CoV-2","CCGTCAAAAAATTCGG",4,66.64,10.89,0.05,0.04,2.9,1.09,0,">1 nonsynonymous","Q163C Q168F",2
"lib2","SARS-CoV-2","CCGTCAAACTACATAC",2,2.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","CCGTCAACAACCCGAA",10,113.1,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C61K S113L N157H P197L",4
"lib2","SARS-CoV-2","CCGTCAAGCGACTCCC",1,8,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V103R R124G",2
"lib2","SARS-CoV-2","CCGTCAATTCTTGTTA",3,9.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2T Y93H V103K D112G N120P E154V S200V",7
"lib2","SARS-CoV-2","CCGTCACCTAAAGCTG",6,95.05,10.72,-0.12,0.02,2.97,1.02,0,">1 nonsynonymous","N1K C61H T85R E141V",4
"lib2","SARS-CoV-2","CCGTCACCTAGTGGAA",5,25.08,8.86,-1.97,0.28,1.51,1.07,0.04,">1 nonsynonymous","G9T D98L Y121N",3
"lib2","SARS-CoV-2","CCGTCACGTTATATGT",4,40.48,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G86V W106V T148G N151I H189T",5
"lib2","SARS-CoV-2","CCGTCAGGAGACAGTA",5,40.43,9.32,-1.52,0.12,1.77,1.18,0,">1 nonsynonymous","N4G N58T D90W P149F",4
"lib2","SARS-CoV-2","CCGTCAGGCGCAGTAA",9,83.24,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A22N S36E S41F C49T A81P D97G",6
"lib2","SARS-CoV-2","CCGTCAGTGAAGATCA",3,8.31,6,-4.84,2,3,1.36,0.02,">1 nonsynonymous","V11I V37L Y50L I88F E141A T201S",6
"lib2","SARS-CoV-2","CCGTCATACCACAACT",8,87.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T100P W106Y F160I K199N",4
"lib2","SARS-CoV-2","CCGTCATATGATAAGA",6,45.39,6,-4.84,2,1.5,1.36,0.04,">1 nonsynonymous","N107T D137Y",2
"lib2","SARS-CoV-2","CCGTCATCTGATAAAG",3,9.61,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L57R N109T I142V V173F",4
"lib2","SARS-CoV-2","CCGTCCAAAATAATAG",2,9.28,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","F44C I142R G152I",3
"lib2","SARS-CoV-2","CCGTCCAAGCTACGTA",12,22.1,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N13L D59S R127H G166M",4
"lib2","SARS-CoV-2","CCGTCCAATGTGGGCA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","A33K I104* I142G G166Q",4
"lib2","SARS-CoV-2","CCGTCCACCCTAGCGA",1,7.78,6.64,-4.2,1.12,1.86,1.11,0.03,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","CCGTCCACTATGGATA",12,280.64,8.7,-2.14,0.05,2.83,1.08,0,">1 nonsynonymous","S45L K87V D98S K114P Y178H",5
"lib2","SARS-CoV-2","CCGTCCACTATTTACC",2,0,NA,NA,NA,NA,NA,NA,"stop","F12V I80A V103P N120L L125R A145*",6
"lib2","SARS-CoV-2","CCGTCCACTTACATCT",3,72.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R78V G172K V182C P197Q",4
"lib2","SARS-CoV-2","CCGTCCAGAAGATCCA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","CCGTCCAGTATTCTAA",1,20.95,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","C61K P177G S184L",3
"lib2","SARS-CoV-2","CCGTCCCTGGAGAGGT",1,9.18,10.83,-0.01,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGTCCGACTCAAACT",7,77.29,10.41,-0.42,0.05,2.93,1.02,0,">1 nonsynonymous","F12I D97H K128E",3
"lib2","SARS-CoV-2","CCGTCCGCTAATTTTT",13,93.2,9.92,-0.91,0.07,2.49,1,0,">1 nonsynonymous","L5V T15S Q84F L122E E141Q",5
"lib2","SARS-CoV-2","CCGTCCGCTGCCTTGA",4,87.06,9.94,-0.9,0.09,2.18,1.04,0,">1 nonsynonymous","L5A F99I",2
"lib2","SARS-CoV-2","CCGTCCTTGGCCGTGA",2,12.81,6,-4.84,2,1.5,1.05,0,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","CCGTCGGAAGGAACCT",4,128.14,9.24,-1.59,0.04,2.94,1.08,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","CCGTCTAATATGCTCG",7,19.02,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14K P82T I104P P149M",4
"lib2","SARS-CoV-2","CCGTCTAGCTAAATTT",8,88.44,9.21,-1.63,0.04,2.91,1.06,0,">1 nonsynonymous","A33M Y119G",2
"lib2","SARS-CoV-2","CCGTCTCAATGCACAA",10,21.68,8.77,-2.06,0.3,1.5,1,0.05,">1 nonsynonymous","A42S P54T W106G G116T T201C",5
"lib2","SARS-CoV-2","CCGTCTCATTAGCACA",2,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S D90S L122H K132N E186L",5
"lib2","SARS-CoV-2","CCGTCTCATTTCATAG",2,29.34,7.08,-3.76,0.13,2.45,1.11,0,">1 nonsynonymous","D112G L125A",2
"lib2","SARS-CoV-2","CCGTCTCGGAAATACA",2,37.32,10.9,0.06,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGTCTCGGACCATAA",5,1.46,NA,NA,NA,NA,NA,NA,"stop","V52P A89* E141I",3
"lib2","SARS-CoV-2","CCGTCTCTGAAGAAAT",4,78.02,10.86,0.02,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGTCTGGCGGTCTCG",3,0,NA,NA,NA,NA,NA,NA,"stop","C6V L60P P96*",3
"lib2","SARS-CoV-2","CCGTCTGTCTGTGACG",3,8.65,11.22,0.38,0.14,2.92,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCGTCTTGAATTCCCA",1,3.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96G",1
"lib2","SARS-CoV-2","CCGTCTTTAACTATTA",12,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S L38G K114H K128D Q144N",5
"lib2","SARS-CoV-2","CCGTCTTTACGTCAAC",1,8.56,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","P82D P133C",2
"lib2","SARS-CoV-2","CCGTCTTTCAGCTGGA",3,3.55,NA,NA,NA,NA,NA,NA,"stop","N107I C150Y Q168*",3
"lib2","SARS-CoV-2","CCGTGAACGAGGGTTC",5,43.04,8.15,-2.69,0.28,1.5,1.14,0.03,">1 nonsynonymous","N4P D137Y",2
"lib2","SARS-CoV-2","CCGTGAATCTAATTAA",6,76.12,10.6,-0.23,0.03,2.95,1.05,0,"1 nonsynonymous","S41I",1
"lib2","SARS-CoV-2","CCGTGACCTAACAATC",4,75.2,10.37,-0.46,0.05,2.84,1.13,0,">1 nonsynonymous","N107C K199H",2
"lib2","SARS-CoV-2","CCGTGACGGAGCGAAC",1,1,NA,NA,NA,NA,NA,NA,"stop","F156M L162* P177M",3
"lib2","SARS-CoV-2","CCGTGAGTCAATCTAT",2,65.13,6,-4.84,1.36,1.5,1.1,0.01,">1 nonsynonymous","S36H A42C V52I K94I K199Y",5
"lib2","SARS-CoV-2","CCGTGCAAATTTTATG",7,23.23,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y35N V71S",2
"lib2","SARS-CoV-2","CCGTGGACTAATGAGG",5,2.24,NA,NA,NA,NA,NA,NA,"stop","W23Y S36V K48P R73* K199G",5
"lib2","SARS-CoV-2","CCGTGGGTTCACAAGT",3,36.27,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","C6P R124G",2
"lib2","SARS-CoV-2","CCGTGGTAATGGGTTT",1,37.62,10.17,-0.67,0.05,2.94,1.02,0,">1 nonsynonymous","C6T N64H A190R",3
"lib2","SARS-CoV-2","CCGTTAAAACGAATGG",5,41.49,6,-4.84,2,1.5,1.38,0.04,">1 nonsynonymous","D34L G86Q T100H P149D",4
"lib2","SARS-CoV-2","CCGTTAAACACACCGT",6,8.69,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6E G83Y Y91K",3
"lib2","SARS-CoV-2","CCGTTAAAGTGTTAAT",1,7.83,9.78,-1.05,0.26,2.48,1.14,0.02,">1 nonsynonymous","A22R G116W V153G",3
"lib2","SARS-CoV-2","CCGTTAAATTAACGAA",2,72.21,10.8,-0.03,0.05,2.95,1.07,0,">1 nonsynonymous","T55Y P149V",2
"lib2","SARS-CoV-2","CCGTTAATTAAGACTT",2,13.61,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","V65S A105E G172C",3
"lib2","SARS-CoV-2","CCGTTAGGTGTCTTAT",5,56.65,9.8,-1.04,0.1,2.01,1.09,0,">1 nonsynonymous","E135V E141F",2
"lib2","SARS-CoV-2","CCGTTATACCTAAAAC",8,101,9.9,-0.93,0.08,2.2,1,0,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","CCGTTATATTAAAGTC",12,207.78,10.81,-0.02,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCGTTCAACCTCATTA",8,255.96,10.41,-0.43,0.04,2.98,1.02,0,">1 nonsynonymous","I2T A42E G174K",3
"lib2","SARS-CoV-2","CCGTTCACCAGTGACG",5,62.69,9.48,-1.35,0.07,2.38,1.08,0,">1 nonsynonymous","R78C S139L T148G",3
"lib2","SARS-CoV-2","CCGTTCACTCTATTCT",1,23.48,9.64,-1.2,0.17,1.78,1.04,0.02,">1 nonsynonymous","T15C G51S T201N",3
"lib2","SARS-CoV-2","CCGTTCAGAACCAAGC",3,52.61,10.33,-0.5,0.07,2.96,1.02,0,"1 nonsynonymous","P169A",1
"lib2","SARS-CoV-2","CCGTTCATAAGATAGA",5,80.43,10.29,-0.54,0.03,2.89,1.06,0,"1 nonsynonymous","N13M",1
"lib2","SARS-CoV-2","CCGTTCCAAGAGTTAT",4,60.23,8.53,-2.31,0.13,1.5,1.13,0.01,">1 nonsynonymous","Y91H Y121K",2
"lib2","SARS-CoV-2","CCGTTCCCGGCTGCGA",12,172.59,6.51,-4.32,0.31,1.5,1.15,0.01,">1 nonsynonymous","T100A Y143D",2
"lib2","SARS-CoV-2","CCGTTCCTATATAAAT",3,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113N R127P",2
"lib2","SARS-CoV-2","CCGTTCCTCGGGCCAC",7,12.27,10.73,-0.11,0.09,2.8,1.2,0,">1 nonsynonymous","P54V P149L",2
"lib2","SARS-CoV-2","CCGTTCTTTCGAGATG",2,29.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36I N92L N107W Y121F",4
"lib2","SARS-CoV-2","CCGTTGAACCGCGCCT",7,92.9,10.69,-0.14,0.03,2.96,1.03,0,">1 nonsynonymous","G9S V37C T85V L122Y",4
"lib2","SARS-CoV-2","CCGTTGAAGACATTCT",14,196.24,10.8,-0.04,0.05,2.88,1.11,0,"1 nonsynonymous","N1V",1
"lib2","SARS-CoV-2","CCGTTGAAGCCTAGCA",3,122.2,10.29,-0.55,0.03,2.95,1.06,0,">1 nonsynonymous","V37Y G155N",2
"lib2","SARS-CoV-2","CCGTTGACCAGAAAAT",1,0.53,NA,NA,NA,NA,NA,NA,"stop","T100* A105G A145V C158D P177A",5
"lib2","SARS-CoV-2","CCGTTGATAGCACACG",2,11.42,10.09,-0.74,0.09,3,1,0,">1 nonsynonymous","G83L G116F",2
"lib2","SARS-CoV-2","CCGTTGCACATAAAAG",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L C61P V77R K94A V103I F156L A190T",7
"lib2","SARS-CoV-2","CCGTTGCGAGCACTTC",12,101.53,9.72,-1.11,0.08,2.2,1.08,0,">1 nonsynonymous","Y91S D97I",2
"lib2","SARS-CoV-2","CCGTTGCGGAACGAAA",9,181.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T55A G146Q P177R",3
"lib2","SARS-CoV-2","CCGTTGGTGATAACCG",5,19.89,6.14,-4.69,0.82,1.61,1.15,0.02,">1 nonsynonymous","A89E K128I",2
"lib2","SARS-CoV-2","CCGTTTACCATAGCGG",10,158.51,9.78,-1.06,0.06,2.19,1.01,0,">1 nonsynonymous","T3S D34A G152M",3
"lib2","SARS-CoV-2","CCGTTTCATGACTTGA",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L G146D",2
"lib2","SARS-CoV-2","CCGTTTCATGATAAGC",3,13.71,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","G51M D112G L162Q",3
"lib2","SARS-CoV-2","CCGTTTCCGAGACAGC",4,22.79,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11S N13S T15G N40L K48T V173C L188Q",7
"lib2","SARS-CoV-2","CCGTTTCCTGCTTCAT",3,24.35,6,-4.84,0.85,2.37,1.21,0.01,">1 nonsynonymous","C31V P54E S113I E141L P169S",5
"lib2","SARS-CoV-2","CCGTTTCTAATTCAAG",6,115.08,10.73,-0.11,0.03,2.95,1.06,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CCGTTTCTAGGGACAA",3,198.56,10.3,-0.54,0.02,2.93,1.06,0,">1 nonsynonymous","Q176M K199G",2
"lib2","SARS-CoV-2","CCGTTTCTAGGTCAAA",6,54.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N64M D112L Q168D G174E K198V",5
"lib2","SARS-CoV-2","CCGTTTGATGGCTAAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCGTTTGCATAAAATC",2,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D Y119R",2
"lib2","SARS-CoV-2","CCGTTTGGAGCAGACC",9,155.69,10.51,-0.33,0.04,2.91,1.06,0,"1 nonsynonymous","Y35A",1
"lib2","SARS-CoV-2","CCGTTTTTAATGTCAT",7,8.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15Y S164V",2
"lib2","SARS-CoV-2","CCGTTTTTGTTGCTAA",2,12.21,10.68,-0.16,0.11,2.82,1.21,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","CCTAAAAAAGAAGCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19E Y159V G166*",3
"lib2","SARS-CoV-2","CCTAAAAAAGGAGTAG",5,46.98,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","P96H N107F T140D G146L",4
"lib2","SARS-CoV-2","CCTAAAAATAAGTTAA",2,26.7,8.81,-2.02,0.28,1.5,1,0.04,">1 nonsynonymous","F70I S184T",2
"lib2","SARS-CoV-2","CCTAAAAATCAAAACC",4,6.4,8.75,-2.09,0.6,1.68,1,0.05,">1 nonsynonymous","N13R N64S F126D",3
"lib2","SARS-CoV-2","CCTAAAAATGCAACCA",14,107.82,9.21,-1.62,0.09,1.67,1.09,0,">1 nonsynonymous","F8Q N24R A42I",3
"lib2","SARS-CoV-2","CCTAAAAATTCGGTGT",11,225.83,10.88,0.04,0.04,2.89,1.08,0,">1 nonsynonymous","L122R S200L",2
"lib2","SARS-CoV-2","CCTAAAACAAACCACA",4,72.43,9.92,-0.91,0.07,2.15,1.08,0,">1 nonsynonymous","S41M T46F V52Q",3
"lib2","SARS-CoV-2","CCTAAAACAGTTAAAA",1,14.33,8.35,-2.49,0.3,1.7,1.05,0.02,">1 nonsynonymous","F99V F156G",2
"lib2","SARS-CoV-2","CCTAAAAGAAAACGTT",17,127.6,6.36,-4.47,0.34,1.5,1.18,0.01,">1 nonsynonymous","T3S V103L R127A Q168R",4
"lib2","SARS-CoV-2","CCTAAAAGAGAACTCC",14,245.37,10.71,-0.12,0.04,2.93,1.06,0,"1 nonsynonymous","K114F",1
"lib2","SARS-CoV-2","CCTAAAAGCGCTCGTC",4,39.67,10.79,-0.05,0.07,2.96,1.07,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CCTAAAAGTACGTACG",3,22.79,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","S19F A42D C49I S139L",4
"lib2","SARS-CoV-2","CCTAAAAGTACTCATA",15,184.82,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C150D F167R",2
"lib2","SARS-CoV-2","CCTAAAATAACTGCAC",2,30.64,9.26,-1.58,0.26,1.5,1,0.04,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","CCTAAAATATACAGAG",8,47.1,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N92E A105Y T148F T170I",4
"lib2","SARS-CoV-2","CCTAAAATCTCAGAAC",8,57.02,6.06,-4.78,1.03,1.5,1.19,0.02,">1 nonsynonymous","A33G P177R",2
"lib2","SARS-CoV-2","CCTAAAATCTTCTAAT",4,34.92,9.45,-1.39,0.1,2.31,1.14,0,">1 nonsynonymous","L57G I142Y",2
"lib2","SARS-CoV-2","CCTAAACAAAACACAT",7,90.18,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","T15P L122S F167K",3
"lib2","SARS-CoV-2","CCTAAACAGAAACGAT",7,83.46,10.58,-0.25,0.04,2.99,1.02,0,">1 nonsynonymous","Y39E F44I K198N",3
"lib2","SARS-CoV-2","CCTAAACAGGGAAACA",2,18.27,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","R127P",1
"lib2","SARS-CoV-2","CCTAAACAGTATTTAA",1,10.95,11,0.16,0.1,2.93,1.11,0,">1 nonsynonymous","D97Q N171M G196W",3
"lib2","SARS-CoV-2","CCTAAACATAATTACT",1,14.02,10.87,0.03,0.12,3,1.05,0.01,"1 nonsynonymous","A33Q",1
"lib2","SARS-CoV-2","CCTAAACCTTAGCTTA",12,46.88,6.47,-4.37,0.65,1.5,1.23,0.04,">1 nonsynonymous","N1Q D97Y V103R I138R F167H",5
"lib2","SARS-CoV-2","CCTAAACGACGTTAAA",7,116.92,10.58,-0.25,0.05,2.81,1.04,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","CCTAAACGTTATACGC",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S L122N",2
"lib2","SARS-CoV-2","CCTAAACTCGGATGTC",2,92.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y165G R179P",2
"lib2","SARS-CoV-2","CCTAAACTTGTATGCG",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92L F99R R124V",3
"lib2","SARS-CoV-2","CCTAAAGAGCTGCGCA",7,507.58,10.73,-0.1,0.04,2.95,1.07,0,"1 nonsynonymous","S29Y",1
"lib2","SARS-CoV-2","CCTAAAGCGAAGTCCT",2,4.57,NA,NA,NA,NA,NA,NA,"stop","L60* G86W G117Q C150M",4
"lib2","SARS-CoV-2","CCTAAAGCTCCAAGTG",3,1.44,NA,NA,NA,NA,NA,NA,"stop","E10R C31* D68A P96K",4
"lib2","SARS-CoV-2","CCTAAAGCTTACCAAA",9,147.4,10.64,-0.19,0.04,2.97,1.02,0,">1 nonsynonymous","F12L V52Y L122K",3
"lib2","SARS-CoV-2","CCTAAAGGAAGCAGAG",4,41.32,9.93,-0.9,0.07,2.36,1,0,">1 nonsynonymous","I2W S43G V52S",3
"lib2","SARS-CoV-2","CCTAAAGGCCCCCTAG",10,518.01,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C6T P161W",2
"lib2","SARS-CoV-2","CCTAAAGTAAAAAGAA",5,34.83,8.6,-2.23,0.11,2.23,1.07,0,">1 nonsynonymous","A42E D112V Y175F",3
"lib2","SARS-CoV-2","CCTAAAGTTGGCCCTA",3,581.41,9.64,-1.2,0.06,2.49,1.02,0,">1 nonsynonymous","A42W G155I",2
"lib2","SARS-CoV-2","CCTAAATAAAAACAGA",2,19.32,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","Y91E D112W",2
"lib2","SARS-CoV-2","CCTAAATAATTTAAGA",6,102.65,10.81,-0.02,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAAATATTAGGCAC",8,409.11,8.21,-2.62,0.13,1.81,1.07,0.01,">1 nonsynonymous","N64Q Q176I T201Q",3
"lib2","SARS-CoV-2","CCTAAATCAAGGTATA",7,107.68,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y35K V52N G83R Y121M P149H",5
"lib2","SARS-CoV-2","CCTAAATCCCTCCGAT",7,47.18,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11T P82V L122D",3
"lib2","SARS-CoV-2","CCTAAATCCGATCTAT",6,164.87,10.52,-0.31,0.04,2.89,1.07,0,">1 nonsynonymous","V37Y C61W",2
"lib2","SARS-CoV-2","CCTAAATCCTTTAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26F S36C N64M P82N",4
"lib2","SARS-CoV-2","CCTAAATCTGCCGTAT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","CCTAAATGTAGTAGAA",2,20.48,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S41F L95S S129P T140K",4
"lib2","SARS-CoV-2","CCTAACAAAGTCCTGA",5,174.53,10.69,-0.14,0.05,2.91,1.06,0,"1 nonsynonymous","T46R",1
"lib2","SARS-CoV-2","CCTAACAACCGCAGTG",6,67.79,10.26,-0.58,0.07,2.64,1.04,0,">1 nonsynonymous","A81K H189I",2
"lib2","SARS-CoV-2","CCTAACACCCGGCTCA",6,55.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L57F G116D P161V S200Y",4
"lib2","SARS-CoV-2","CCTAACACTCTCTTTA",2,155,10.88,0.05,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAACAGAAAGGGTT",3,0.75,NA,NA,NA,NA,NA,NA,"stop","F44A S139N V173* V181R",4
"lib2","SARS-CoV-2","CCTAACATAATACGAA",22,305.51,10.4,-0.44,0.02,2.92,1.06,0,">1 nonsynonymous","N64D Y91I P197C",3
"lib2","SARS-CoV-2","CCTAACATATGAAGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","CCTAACCACGGAGGTT",3,52.08,10.84,0,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAACCCAACCCGAA",13,4.41,NA,NA,NA,NA,NA,NA,"stop","K26* Y35C K128M T140N",4
"lib2","SARS-CoV-2","CCTAACCCCAACATAA",6,177.62,7.06,-3.78,0.29,1.5,1.08,0.02,">1 nonsynonymous","C6N L60M V153H G166P T201R",5
"lib2","SARS-CoV-2","CCTAACCCCATGCAGT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCTAACCGGACAGTTT",5,102.59,10.38,-0.46,0.05,2.9,1.11,0,"1 nonsynonymous","T148P",1
"lib2","SARS-CoV-2","CCTAACCGGTCAGGAT",1,41.6,10.66,-0.17,0.05,2.81,1.2,0,">1 nonsynonymous","Y35M T100I Q163S",3
"lib2","SARS-CoV-2","CCTAACCTCGATACAA",15,231.43,8.34,-2.5,0.12,2.7,1.05,0.01,">1 nonsynonymous","K87R S113L",2
"lib2","SARS-CoV-2","CCTAACCTGACCCCTT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","P54H P96N P133L Y143I N157* Q168K",6
"lib2","SARS-CoV-2","CCTAACGATATAACGT",6,75.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3S E10G F44C I142N",4
"lib2","SARS-CoV-2","CCTAACGTTATAGGAA",3,10.53,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S45T F99K P133T",3
"lib2","SARS-CoV-2","CCTAACTAAACAATTC",6,45.08,6,-4.84,2,1.5,1.26,0.04,"1 nonsynonymous","N92W",1
"lib2","SARS-CoV-2","CCTAACTAATGAGAAA",10,176.28,10.77,-0.06,0.04,2.91,1.1,0,">1 nonsynonymous","C61R A192E",2
"lib2","SARS-CoV-2","CCTAACTAATTCTCAT",2,24.7,8.31,-2.53,0.2,1.5,1.05,0.01,">1 nonsynonymous","A14D V52L V65Q T201W",4
"lib2","SARS-CoV-2","CCTAACTCCCAAGCCG",4,0.06,NA,NA,NA,NA,NA,NA,"stop","D112M K199*",2
"lib2","SARS-CoV-2","CCTAACTCGTTGGACA",12,112.48,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F70K R127N F160T",3
"lib2","SARS-CoV-2","CCTAACTGTATTTACG",13,144.53,10.87,0.04,0.04,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTAACTGTGCAGATG",6,101.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R124S E135T G146T S164H",4
"lib2","SARS-CoV-2","CCTAACTTGGAGACAC",6,41.73,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56Y P82Y D90I G116R S164T V173L",6
"lib2","SARS-CoV-2","CCTAACTTGTCCAAAT",5,46.33,10.02,-0.82,0.1,2.3,1.07,0,">1 nonsynonymous","N4R F62M P96T",3
"lib2","SARS-CoV-2","CCTAAGAAAAAGCGAC",3,0.17,NA,NA,NA,NA,NA,NA,"stop","Y50* K87L L95P S113K Y119K",5
"lib2","SARS-CoV-2","CCTAAGAAACGGTACC",3,7.88,NA,NA,NA,NA,NA,NA,"stop","R27* Y66L N157A",3
"lib2","SARS-CoV-2","CCTAAGAAACTCGAAA",6,99.51,10.94,0.1,0.05,3,1.01,0,"1 nonsynonymous","A42K",1
"lib2","SARS-CoV-2","CCTAAGAACATTTCCG",7,82.99,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","Y35S F44L F62W F99L N130S T201R",6
"lib2","SARS-CoV-2","CCTAAGAACGAAAGTT",9,86.3,10.21,-0.62,0.07,2.74,1,0,">1 nonsynonymous","L5A I104S",2
"lib2","SARS-CoV-2","CCTAAGACTAACACAA",6,125.82,9.42,-1.42,0.04,2.87,1.12,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","CCTAAGAGTAGTAAAG",2,16.62,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F70I V173M",2
"lib2","SARS-CoV-2","CCTAAGAGTCCAATCC",2,11.48,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y35F Y93D",2
"lib2","SARS-CoV-2","CCTAAGATACCATGTG",2,12.82,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","R16N I72A W106N",3
"lib2","SARS-CoV-2","CCTAAGCAAGATCAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85R I104L",2
"lib2","SARS-CoV-2","CCTAAGCACGAATTTA",1,25.56,10.02,-0.82,0.07,3,1,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","CCTAAGCGAAGCGATC",3,66.75,9.37,-1.47,0.07,2.82,1.11,0,">1 nonsynonymous","N1Y G83T L125S",3
"lib2","SARS-CoV-2","CCTAAGCGAATTGATA",5,115.87,10.63,-0.2,0.03,2.91,1.05,0,">1 nonsynonymous","G9T N64M",2
"lib2","SARS-CoV-2","CCTAAGCTAGATTTAT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34K F99Y V103F C158N",4
"lib2","SARS-CoV-2","CCTAAGCTAGTCGATA",6,10.55,8,-2.84,0.32,1.5,1.07,0.04,">1 nonsynonymous","V77W F99K P133Q P149S",4
"lib2","SARS-CoV-2","CCTAAGCTGCTCGTAT",4,41.07,9.9,-0.94,0.06,2.68,1.04,0,"1 nonsynonymous","S19M",1
"lib2","SARS-CoV-2","CCTAAGGGACGATCTA",2,35.31,10.39,-0.45,0.05,2.79,1.19,0,">1 nonsynonymous","S41F K48R K56C K87Y",4
"lib2","SARS-CoV-2","CCTAAGTCAATACACG",11,163.83,10.26,-0.58,0.03,2.96,1.08,0,">1 nonsynonymous","R16T F44E K87M",3
"lib2","SARS-CoV-2","CCTAAGTCGAGGATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R A105P V115F C195F",4
"lib2","SARS-CoV-2","CCTAAGTCGAGTACAC",3,13.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F17R Y178K",2
"lib2","SARS-CoV-2","CCTAAGTGTAAGCTTA",2,15.94,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A33S G51L W106M",3
"lib2","SARS-CoV-2","CCTAAGTTAGCTCGAT",1,6.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68W A105S S113N",3
"lib2","SARS-CoV-2","CCTAAGTTCCCAAATA",2,13.75,10.77,-0.06,0.04,2.82,1.21,0,">1 nonsynonymous","N40T S129N K198Q",3
"lib2","SARS-CoV-2","CCTAATAAAACCGCTG",3,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCTAATAAAATGTGTG",7,113.76,9.59,-1.24,0.06,2.75,1.05,0,">1 nonsynonymous","E10Q D75I",2
"lib2","SARS-CoV-2","CCTAATAACGCTATGT",5,0.32,NA,NA,NA,NA,NA,NA,"stop","Y35G T201*",2
"lib2","SARS-CoV-2","CCTAATAATGTAACCA",4,28.37,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V11L N58A L95F F126A E135L",5
"lib2","SARS-CoV-2","CCTAATACAAATGAAG",3,23.8,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y21Q K56L F99S N118E",4
"lib2","SARS-CoV-2","CCTAATAGGGGGGTTT",9,5.1,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","W106K A145R N157C",3
"lib2","SARS-CoV-2","CCTAATAGTTAATTTA",2,24.74,6.23,-4.61,0.81,1.5,1.13,0.04,">1 nonsynonymous","R73T V77W V153E",3
"lib2","SARS-CoV-2","CCTAATATACATATGA",1,16.2,6.82,-4.02,0.66,1.5,1.26,0.05,">1 nonsynonymous","D98Y Y165I",2
"lib2","SARS-CoV-2","CCTAATATAGTGAATA",1,13.18,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K48T T55M A89L N110M",4
"lib2","SARS-CoV-2","CCTAATATGGAACCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123V S129T T148L",3
"lib2","SARS-CoV-2","CCTAATATTAAGAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L38I N107V R127D R136* P149F",5
"lib2","SARS-CoV-2","CCTAATATTAATTATA",1,12.48,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","T15A A81S C102I K128R Q176G",5
"lib2","SARS-CoV-2","CCTAATCAATAGGCCT",1,7.37,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T3V L38Y N107M A192V",4
"lib2","SARS-CoV-2","CCTAATCACCTCTTAG",5,20.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A V103Y F160L",3
"lib2","SARS-CoV-2","CCTAATCAGATAGCCT",4,59.91,10.87,0.03,0.07,2.93,1.09,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","CCTAATCAGCCAGGCA",8,209.8,10.53,-0.3,0.03,2.95,1.04,0,">1 nonsynonymous","S36C D98N V115I",3
"lib2","SARS-CoV-2","CCTAATCAGTTGAATA",2,45.46,9.67,-1.17,0.13,2.55,1.06,0.01,">1 nonsynonymous","G9L Y91H",2
"lib2","SARS-CoV-2","CCTAATCATAGCAAAC",4,111.36,10.61,-0.22,0.02,2.92,1.08,0,">1 nonsynonymous","N4R A81Q",2
"lib2","SARS-CoV-2","CCTAATCATTAATATT",1,7.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P G116F",2
"lib2","SARS-CoV-2","CCTAATCGTTGACCTT",5,56.17,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","G172W",1
"lib2","SARS-CoV-2","CCTAATCTAATGATGT",2,5.11,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1G L95E V173M",3
"lib2","SARS-CoV-2","CCTAATGAAGGCAGGA",1,75.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y165T Y178G",2
"lib2","SARS-CoV-2","CCTAATGACAAATATA",4,2.61,NA,NA,NA,NA,NA,NA,"stop","D59F N120S F160*",3
"lib2","SARS-CoV-2","CCTAATGACACACTTA",3,75.31,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F44S G86L G101P K114V N120Q V153N Q176W K199L",8
"lib2","SARS-CoV-2","CCTAATGCACCAACCA",2,24.86,9.7,-1.14,0.04,2.93,1.1,0,">1 nonsynonymous","E10V K87Q",2
"lib2","SARS-CoV-2","CCTAATGCGCGCGGAG",1,20.42,9.99,-0.85,0.12,2.27,1.01,0.01,">1 nonsynonymous","D97G F134K",2
"lib2","SARS-CoV-2","CCTAATGTCGTTCATG",6,45.79,9.55,-1.29,0.1,1.89,1.06,0,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","CCTAATTAAAAATTAC",8,119.63,9.94,-0.9,0.05,2.34,1.02,0,">1 nonsynonymous","A18Y R136L",2
"lib2","SARS-CoV-2","CCTAATTAAAGTAAAC",1,6.21,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","S19E D98V K128Y P149L T201R",5
"lib2","SARS-CoV-2","CCTAATTAGACCCGCT",4,0.21,NA,NA,NA,NA,NA,NA,"stop","D97W T201*",2
"lib2","SARS-CoV-2","CCTAATTCAAACGCTA",3,9.65,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C49N G83S A89Y A105S P133Q T201Y",6
"lib2","SARS-CoV-2","CCTAATTCCACTCGGT",3,24.23,9.22,-1.61,0.09,2.68,1.04,0,">1 nonsynonymous","P54V C61A G146F",3
"lib2","SARS-CoV-2","CCTAATTTGATCAGTC",10,114.48,10.88,0.05,0.06,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTACAAAACATGATG",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S Q84L G152Q",3
"lib2","SARS-CoV-2","CCTACAAACGTAAACA",4,1.9,NA,NA,NA,NA,NA,NA,"stop","R16A V37S G83Q K87T T201*",5
"lib2","SARS-CoV-2","CCTACAAAGCAAACAA",2,49.28,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F8S G86I K128M",3
"lib2","SARS-CoV-2","CCTACAAAGTTCCCTT",1,18.9,10.64,-0.19,0.07,2.94,1.07,0,">1 nonsynonymous","G83C L187V",2
"lib2","SARS-CoV-2","CCTACAAATCGGTGTG",4,0.58,NA,NA,NA,NA,NA,NA,"stop","G9T V71* A81R",3
"lib2","SARS-CoV-2","CCTACAAATGTTCATA",9,47.39,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6K Y35C I88M A145T C195F",5
"lib2","SARS-CoV-2","CCTACAACCAATGCTA",4,28.55,10.29,-0.54,0.07,2.8,1.16,0,">1 nonsynonymous","A42D G51T",2
"lib2","SARS-CoV-2","CCTACAACCGTTACCG",2,7,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","L5A F99E V173F",3
"lib2","SARS-CoV-2","CCTACAACTGCTTTCC",3,10.92,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F44L F126T F134T P149N F167L V173D",6
"lib2","SARS-CoV-2","CCTACAAGTTACTGGT",5,139.22,10.86,0.03,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTACAATACAACCGA",1,19.22,6,-4.84,2,1.5,1.16,0.08,">1 nonsynonymous","T3P N92I N151Q",3
"lib2","SARS-CoV-2","CCTACAATCTAATTGA",14,129.01,9.71,-1.13,0.08,2.02,1.1,0,">1 nonsynonymous","T100L I104G K128T",3
"lib2","SARS-CoV-2","CCTACAATTTAATATA",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C R124K K199I",3
"lib2","SARS-CoV-2","CCTACACACATTATCG",21,247.55,9.46,-1.38,0.06,1.91,1.09,0,">1 nonsynonymous","I28K C61A",2
"lib2","SARS-CoV-2","CCTACACATAATTCGT",4,0.19,NA,NA,NA,NA,NA,NA,"stop","C49* F167Q",2
"lib2","SARS-CoV-2","CCTACACATACTTTTC",4,46.44,8.54,-2.3,0.1,3,1.04,0,">1 nonsynonymous","G146N P149R",2
"lib2","SARS-CoV-2","CCTACACATTGCCGGC",5,19.64,9.73,-1.11,0.11,2.26,1.01,0,">1 nonsynonymous","F8W S41L I104F P133R A190S",5
"lib2","SARS-CoV-2","CCTACACCCAAACTGT",4,76.6,9.85,-0.99,0.07,1.99,1.02,0,">1 nonsynonymous","N1R Y39L E135S L162V",4
"lib2","SARS-CoV-2","CCTACACCCACAGTAA",4,49.98,10.68,-0.15,0.06,2.99,1,0,">1 nonsynonymous","N24G K198W",2
"lib2","SARS-CoV-2","CCTACACGATCATCCG",2,1.92,NA,NA,NA,NA,NA,NA,"stop","N1R L57N S69* T170Y",4
"lib2","SARS-CoV-2","CCTACACGCAGAGTAG",4,188.44,6.25,-4.58,0.65,1.5,1.18,0.02,">1 nonsynonymous","D90G Q176R",2
"lib2","SARS-CoV-2","CCTACACGCTAACAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45W S129Y",2
"lib2","SARS-CoV-2","CCTACACGGAAAATAC",2,9.28,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","I2Q C49V Y66D G86V S147L G172V T201R",7
"lib2","SARS-CoV-2","CCTACACTAGGTTTAA",4,104.72,10.15,-0.69,0.07,2.54,1.03,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CCTACACTGCGATGAA",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L N13L R179L",3
"lib2","SARS-CoV-2","CCTACATAACAGCTAC",3,17.7,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G9W C49V P96K T100P Y119G R136S",6
"lib2","SARS-CoV-2","CCTACATAGACGCAAG",2,15.35,7.53,-3.31,0.3,1.6,1.17,0.02,">1 nonsynonymous","R27T Y159R",2
"lib2","SARS-CoV-2","CCTACATCTAATCCAG",3,33.57,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P96L G172H",2
"lib2","SARS-CoV-2","CCTACATCTCTTTCGT",10,222.09,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37T F44M L95D",3
"lib2","SARS-CoV-2","CCTACATGCACTAGCG",13,115.86,10.61,-0.23,0.03,2.97,1.01,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","CCTACATGTTACAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L Y121T R136K T170S",4
"lib2","SARS-CoV-2","CCTACCAAAATACCAA",14,154.76,6,-4.84,1.89,1.5,1.23,0.02,">1 nonsynonymous","D90C I104D T201N",3
"lib2","SARS-CoV-2","CCTACCAAGAGGCGAT",1,78.22,10.67,-0.16,0.03,2.92,1.09,0,"1 nonsynonymous","I72L",1
"lib2","SARS-CoV-2","CCTACCAATAAAACAA",2,26.96,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N30T D98R S113D",3
"lib2","SARS-CoV-2","CCTACCATATATGCGT",3,89.18,10.75,-0.09,0.02,2.96,1.04,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","CCTACCATGACCTCGG",9,40.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F17W N24F S45F C61V A81R T170M",6
"lib2","SARS-CoV-2","CCTACCATTGTAAATT",2,31.01,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61K Y93T T148Y",3
"lib2","SARS-CoV-2","CCTACCCAAGTCTCGC",20,320.96,9.78,-1.06,0.05,2.44,1.06,0,">1 nonsynonymous","V11F P96S",2
"lib2","SARS-CoV-2","CCTACCCCAAAATCAG",8,36.2,7.53,-3.31,0.16,1.83,1.05,0.01,">1 nonsynonymous","Y175T L188A",2
"lib2","SARS-CoV-2","CCTACCCCACTATATG",8,89.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48A C150F",2
"lib2","SARS-CoV-2","CCTACCGAATACTCGC",8,3.34,NA,NA,NA,NA,NA,NA,"stop","T63* K199N",2
"lib2","SARS-CoV-2","CCTACCTACCCCGAGG",7,46,8.62,-2.22,0.16,1.5,1.01,0.01,">1 nonsynonymous","S36C S45P N120F",3
"lib2","SARS-CoV-2","CCTACCTGAACGAGTG",12,190.71,10.8,-0.03,0.05,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTACCTTAGTACAAG",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83R Y93R N107F",3
"lib2","SARS-CoV-2","CCTACCTTCGCTGAAA",7,50.59,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R27P T85P W106D",3
"lib2","SARS-CoV-2","CCTACCTTTTTTTGAA",3,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F C102G T201F",3
"lib2","SARS-CoV-2","CCTACGAATGCTAATT",3,37.63,8.18,-2.66,0.29,1.5,1,0.06,">1 nonsynonymous","A89D A192Y",2
"lib2","SARS-CoV-2","CCTACGACACCCGTCC",11,3.87,NA,NA,NA,NA,NA,NA,"stop","I142T P149* G155L",3
"lib2","SARS-CoV-2","CCTACGATACCCTAGG",1,6.94,10.13,-0.7,0.26,2.17,1,0.01,">1 nonsynonymous","L60R R136W",2
"lib2","SARS-CoV-2","CCTACGCAACTAGTTG",4,57.14,10.78,-0.05,0.03,2.95,1.05,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","CCTACGCCTGCCTATA",2,12.55,10.03,-0.8,0.17,2.69,1.1,0.02,">1 nonsynonymous","S36Y E141I",2
"lib2","SARS-CoV-2","CCTACGTGTTCTATTA",4,56.99,8.33,-2.51,0.13,2.63,1.07,0.01,"1 nonsynonymous","N157C",1
"lib2","SARS-CoV-2","CCTACGTTTCGAAAAC",4,120.62,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N4T R27G I28L R124F",4
"lib2","SARS-CoV-2","CCTACTACAGTATACA",2,89.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N120R G146N G172Y",3
"lib2","SARS-CoV-2","CCTACTACCAGCCAAG",1,94.3,9.63,-1.21,0.06,2.81,1.03,0,">1 nonsynonymous","Y91F D112E",2
"lib2","SARS-CoV-2","CCTACTAGCCAATGAT",3,3.52,NA,NA,NA,NA,NA,NA,"stop","W23* L95G",2
"lib2","SARS-CoV-2","CCTACTAGTTAAAACA",2,10.54,7.88,-2.96,0.17,2.53,1.1,0.01,">1 nonsynonymous","T55S A89G F160V",3
"lib2","SARS-CoV-2","CCTACTATGACACATA",1,3.06,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCTACTATGCAATTAG",6,51.09,6.12,-4.72,0.97,1.5,1.18,0.03,">1 nonsynonymous","E76K N110Y Y119R Y143C F156L",5
"lib2","SARS-CoV-2","CCTACTCAGTTAAAAC",2,53.7,10.64,-0.2,0.06,2.96,1.04,0,"1 nonsynonymous","G155T",1
"lib2","SARS-CoV-2","CCTACTCATAACTGCC",11,6.82,NA,NA,NA,NA,NA,NA,"stop","G9A K56* Q79L E154M",4
"lib2","SARS-CoV-2","CCTACTCCCCTTGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F N58F",2
"lib2","SARS-CoV-2","CCTACTCCGACGATGA",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I E10W A42N Y66S T100R P197T",6
"lib2","SARS-CoV-2","CCTACTCGCTAAATAA",2,9.72,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","F70W",1
"lib2","SARS-CoV-2","CCTACTGAAATATTCG",7,21.3,6.06,-4.78,0.88,1.5,1.09,0.02,">1 nonsynonymous","Y66S R78L T100V R127A Y143M S200N",6
"lib2","SARS-CoV-2","CCTACTGCTTTGTTTC",13,51.49,6,-4.84,1.54,3,1.12,0,">1 nonsynonymous","C6M R73I G83V G116R",4
"lib2","SARS-CoV-2","CCTACTGGGTCTTAGC",5,65.79,10.81,-0.03,0.08,2.78,1.12,0,"1 nonsynonymous","K199M",1
"lib2","SARS-CoV-2","CCTACTGTTTCGGACG",3,59.05,10.76,-0.08,0.05,2.87,1.11,0,">1 nonsynonymous","S41G F160R",2
"lib2","SARS-CoV-2","CCTACTTCACTATACA",3,120.99,10.77,-0.07,0.03,3,1.03,0,"1 nonsynonymous","T63E",1
"lib2","SARS-CoV-2","CCTACTTGAATTATTA",1,9.38,7.81,-3.03,0.5,1.6,1.25,0.05,">1 nonsynonymous","N1E Y165I G196W T201E",4
"lib2","SARS-CoV-2","CCTACTTGTATCAAAG",8,88.96,9.64,-1.19,0.05,2.08,1.06,0,"1 nonsynonymous","L162R",1
"lib2","SARS-CoV-2","CCTACTTTACACAACC",1,5.64,NA,NA,NA,NA,NA,NA,"stop","C49L G86*",2
"lib2","SARS-CoV-2","CCTAGAAAATTCGTAG",9,72.42,8.03,-2.81,0.21,1.53,1.06,0.02,">1 nonsynonymous","S43A K56L D90G G117R S164R",5
"lib2","SARS-CoV-2","CCTAGAAACTGGTTAC",6,50.03,9.26,-1.58,0.09,1.95,1.19,0,">1 nonsynonymous","L57H D98H K114M",3
"lib2","SARS-CoV-2","CCTAGAACCCTAATCA",5,31.83,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A33S N92G D112L",3
"lib2","SARS-CoV-2","CCTAGAACCTGTACGG",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L D98Y V153N",3
"lib2","SARS-CoV-2","CCTAGAACGTCGTATT",8,0.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","CCTAGAAGCAAAGGGA",2,19.17,9.72,-1.11,0.2,2.59,1.11,0.01,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","CCTAGAAGTATACATG",2,72.28,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Y35K Y121C Q176R",3
"lib2","SARS-CoV-2","CCTAGAATATGCCAGG",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K A81H K94A Y119D K128H N151Y",6
"lib2","SARS-CoV-2","CCTAGAATCTATAAAT",5,33.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P54L F99M T148A L162R",4
"lib2","SARS-CoV-2","CCTAGAATCTTGATCG",15,323.14,10.78,-0.06,0.05,2.87,1.07,0,"1 nonsynonymous","P133A",1
"lib2","SARS-CoV-2","CCTAGAATGAATTGAG",5,123.34,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S113R Y175R L187P",3
"lib2","SARS-CoV-2","CCTAGACAAAACATTG",11,2.49,NA,NA,NA,NA,NA,NA,"stop","C61R E141* G155S",3
"lib2","SARS-CoV-2","CCTAGACCCGGCACTT",2,27.21,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","I80G L95P T100V",3
"lib2","SARS-CoV-2","CCTAGACCTACATAAA",4,33.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T100K E141P P169N G174V",4
"lib2","SARS-CoV-2","CCTAGACGCTCAAGAG",2,22.23,10.01,-0.82,0.2,1.84,1.06,0.01,">1 nonsynonymous","N4R F47W P96K",3
"lib2","SARS-CoV-2","CCTAGACGGTATCGAT",2,71.71,10.53,-0.31,0.05,2.86,1.13,0,">1 nonsynonymous","C61I L131V",2
"lib2","SARS-CoV-2","CCTAGACTAACAAACC",6,83.85,10.58,-0.25,0.05,3,1.01,0,">1 nonsynonymous","Q144K N151D",2
"lib2","SARS-CoV-2","CCTAGACTACCTATAC",5,0.91,NA,NA,NA,NA,NA,NA,"stop","N120R Y143*",2
"lib2","SARS-CoV-2","CCTAGACTATAGTTAA",5,53.42,9.56,-1.28,0.1,1.98,1.12,0,">1 nonsynonymous","A14G W106V",2
"lib2","SARS-CoV-2","CCTAGACTTAAAGCGC",5,62.13,10.29,-0.55,0.07,2.49,1.1,0,">1 nonsynonymous","E76S T201R",2
"lib2","SARS-CoV-2","CCTAGAGACAGTTTTG",2,6.31,9.67,-1.17,0.14,2.56,1.02,0.01,">1 nonsynonymous","C61A N92S",2
"lib2","SARS-CoV-2","CCTAGAGCAACCAGAG",14,0.22,NA,NA,NA,NA,NA,NA,"stop","G9N A67S R136L A190V P197*",5
"lib2","SARS-CoV-2","CCTAGAGTCTGCCAAA",3,160.94,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S69C A105L S129L",3
"lib2","SARS-CoV-2","CCTAGATAAGAATACA",15,14.44,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6P R25L L38V D68T W106L S129P R179F",7
"lib2","SARS-CoV-2","CCTAGATCACCTAAGG",5,82.9,10.84,0,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAGATCGCTAAGCG",2,42.98,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","F44N F99Y L122F P177S",4
"lib2","SARS-CoV-2","CCTAGATGATACTAGG",1,55.82,10.97,0.13,0.06,3,1.03,0,">1 nonsynonymous","T55K S184T",2
"lib2","SARS-CoV-2","CCTAGATTTTTTTGAT",3,20.35,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T140P R179G",2
"lib2","SARS-CoV-2","CCTAGCAAAACTTGGC",3,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4C S129C P161T",3
"lib2","SARS-CoV-2","CCTAGCAAGTATTTAT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","R16K N107* E141P G174L",4
"lib2","SARS-CoV-2","CCTAGCAATTAGTTTT",3,6.81,NA,NA,NA,NA,NA,0.55,">1 nonsynonymous","A14I A89Y I104H K132W R179L",5
"lib2","SARS-CoV-2","CCTAGCACGAGACTTT",5,142.81,10.26,-0.58,0.04,2.81,1.03,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","CCTAGCACGGCCTTGT",1,15.81,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","P7I C150F",2
"lib2","SARS-CoV-2","CCTAGCAGAATTGCCA",7,42.5,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F12S V37G F44Y C49I I72R V115G L183G",7
"lib2","SARS-CoV-2","CCTAGCAGCTCACCCT",13,286.72,10.7,-0.14,0.03,2.97,1.05,0,"1 nonsynonymous","L60G",1
"lib2","SARS-CoV-2","CCTAGCATCACCCTCC",2,0.64,NA,NA,NA,NA,NA,NA,"stop","G9T S41L A67S T85A S113R Y123*",6
"lib2","SARS-CoV-2","CCTAGCCATGACCAAA",1,6.13,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","N4K F12I C49L N64H D112L Y123T S164C T201L",8
"lib2","SARS-CoV-2","CCTAGCCCATGCAACC",2,8.78,9.26,-1.57,0.12,2.89,1.04,0,">1 nonsynonymous","I104T Y119F",2
"lib2","SARS-CoV-2","CCTAGCCCCTTTAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6V V20P V37L V71* I88K G116* Y143S",7
"lib2","SARS-CoV-2","CCTAGCCGACGAATCT",21,243.51,10.88,0.04,0.03,2.94,1.08,0,"1 nonsynonymous","T100F",1
"lib2","SARS-CoV-2","CCTAGCCGATTATATG",3,26.27,6,-4.84,1.93,1.5,1.11,0.01,">1 nonsynonymous","C6W I28A I104M S113K I142C",5
"lib2","SARS-CoV-2","CCTAGCGACTAGTCAA",7,81.74,10.74,-0.1,0.06,2.9,1.13,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","CCTAGCGTTAACCGGA",2,24.39,8.46,-2.37,0.17,2.76,1.07,0.02,">1 nonsynonymous","S43N P149L N157H",3
"lib2","SARS-CoV-2","CCTAGCTATCAAAAAT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","CCTAGCTATCAGCTAA",10,200.36,10.84,0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAGGATCCATCGGT",12,120.26,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T100K D112P V153C",3
"lib2","SARS-CoV-2","CCTAGGCACCAATTTC",5,2.55,NA,NA,NA,NA,NA,NA,"stop","R25I Y50N K87* E141* Y178V L183K",6
"lib2","SARS-CoV-2","CCTAGGCATTGTCACA",22,12.11,NA,NA,NA,NA,NA,NA,"stop","T15W I80* N92L L122W S147F Y178R",6
"lib2","SARS-CoV-2","CCTAGGCCATACTAGC",7,94.48,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R73G N107S G174R",3
"lib2","SARS-CoV-2","CCTAGGCGATCATGGG",4,21.72,9.46,-1.38,0.29,1.5,1,0.04,">1 nonsynonymous","T3C C49V",2
"lib2","SARS-CoV-2","CCTAGGCGGCTAATTT",1,14.93,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G83P D98F Y123K C150R C158R G174T",6
"lib2","SARS-CoV-2","CCTAGGGAATTTAAAG",3,16.97,8.88,-1.96,0.19,1.5,1.03,0.02,">1 nonsynonymous","F8N I142T",2
"lib2","SARS-CoV-2","CCTAGGGATTGAACTG",13,272.48,10.13,-0.7,0.04,2.74,1.05,0,">1 nonsynonymous","A105V K199N",2
"lib2","SARS-CoV-2","CCTAGGGCCCGAGACA",4,1.22,NA,NA,NA,NA,NA,NA,"stop","S41* T201S",2
"lib2","SARS-CoV-2","CCTAGGGCCTCCCTTA",25,8.25,NA,NA,NA,NA,NA,NA,"stop","A33E L60* G86V Y93E D98L N107V",6
"lib2","SARS-CoV-2","CCTAGGTATTAGACCT",2,64.29,10.81,-0.02,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTAGTATCAGTAATT",1,36.75,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V20M",1
"lib2","SARS-CoV-2","CCTAGTATGCAAGGGC",5,139.03,9.91,-0.93,0.07,2.57,1.06,0,">1 nonsynonymous","E10D K26N S43W T148V F160C",5
"lib2","SARS-CoV-2","CCTAGTCCATGCCACA",4,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y C61F G86W S113N",4
"lib2","SARS-CoV-2","CCTAGTCTAGGTAGTA",2,13.33,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","N1V E10N D34L Q176G",4
"lib2","SARS-CoV-2","CCTAGTGCTTAGAAGC",6,0,NA,NA,NA,NA,NA,NA,"stop","G9* D97N Y159R",3
"lib2","SARS-CoV-2","CCTAGTTAAATGCACC",2,25.12,9.72,-1.12,0.11,2.74,1.16,0.01,"1 nonsynonymous","C6P",1
"lib2","SARS-CoV-2","CCTAGTTACCTCAAAG",3,87.9,10.33,-0.51,0.06,2.84,1.04,0,">1 nonsynonymous","V37L Y91C A192L",3
"lib2","SARS-CoV-2","CCTAGTTAGATCTCAC",4,59.12,10.12,-0.71,0.07,2.64,1,0,">1 nonsynonymous","G83C A89T T148G",3
"lib2","SARS-CoV-2","CCTAGTTTTTCTTGAA",1,21.4,9.07,-1.77,0.19,1.85,1.44,0.02,">1 nonsynonymous","A33V Y91C V173P",3
"lib2","SARS-CoV-2","CCTATAAAAGCCACAT",2,7.25,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","I2L A22Q D34L A105M K114W A145L",6
"lib2","SARS-CoV-2","CCTATAAAAGTACATC",2,7.19,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","G9S S41R D90P E135T",4
"lib2","SARS-CoV-2","CCTATAAACAGACGAA",1,112.78,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Q84L N171K",2
"lib2","SARS-CoV-2","CCTATAAACATACCTA",9,109.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10L Y91I F99T A105L R124G A145V A192T G196E",8
"lib2","SARS-CoV-2","CCTATAAACGAATAGC",1,86.56,9.58,-1.25,0.05,2.87,1.13,0,">1 nonsynonymous","N4E Y119H",2
"lib2","SARS-CoV-2","CCTATAACAAAACTAC",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88W V182D",2
"lib2","SARS-CoV-2","CCTATAACCGAGTTCG",1,16.03,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T63Y Y93P Y121P F167R V182F",5
"lib2","SARS-CoV-2","CCTATAACGTGGACAT",5,18.43,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","G9V D34F R73G Y143I",4
"lib2","SARS-CoV-2","CCTATAACTCACAACA",7,33.47,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","CCTATAAGCCCAACGG",9,1.56,NA,NA,NA,NA,NA,NA,"stop","T46V T63G D75F A105*",4
"lib2","SARS-CoV-2","CCTATAAGTGCGAGAC",1,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75C G146V E154C",3
"lib2","SARS-CoV-2","CCTATAATAACAACCC",13,187.46,10.7,-0.13,0.04,2.94,1.05,0,"1 nonsynonymous","N1F",1
"lib2","SARS-CoV-2","CCTATAATCCGCCCAT",9,218.58,9.21,-1.62,0.03,2.89,1.11,0,">1 nonsynonymous","D97K T170L",2
"lib2","SARS-CoV-2","CCTATAATTTGAACCG",4,76.39,9.01,-1.83,0.06,2.9,1.1,0,"1 nonsynonymous","L125R",1
"lib2","SARS-CoV-2","CCTATACAAGTCGCTA",3,3.26,NA,NA,NA,NA,NA,NA,"stop","K87M N110* E141A S147L C158V F167S",6
"lib2","SARS-CoV-2","CCTATACAATCGATCC",8,189.97,10.72,-0.12,0.03,2.94,1.07,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","CCTATACAGTGAACTA",3,60.94,6.52,-4.31,0.43,1.5,1.14,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","CCTATACCACGAGAAT",2,50.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y91K S113E N171D",3
"lib2","SARS-CoV-2","CCTATACCATACAAAA",2,24.91,9.2,-1.64,0.13,1.84,1.1,0.01,">1 nonsynonymous","D59Q A89F",2
"lib2","SARS-CoV-2","CCTATACCGACCTATT",10,173.19,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","K26T G86V N120A R127T G146D E154Y P177V",7
"lib2","SARS-CoV-2","CCTATACGCATTAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S D90N I142A N157I",4
"lib2","SARS-CoV-2","CCTATACTAAAGCGCG",4,22.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A18R Y39F I80W K94D",4
"lib2","SARS-CoV-2","CCTATACTCTTACTAA",1,16.84,6,-4.83,2,1.5,1.36,0.07,"1 nonsynonymous","I80W",1
"lib2","SARS-CoV-2","CCTATACTGAGGAAAG",3,58,10.95,0.12,0.09,2.96,1.05,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","CCTATAGAACAAACCT",2,39.88,9.75,-1.09,0.07,2.22,1.09,0,">1 nonsynonymous","D59Y S139I",2
"lib2","SARS-CoV-2","CCTATAGAGTGGGTTT",9,148.92,8.87,-1.96,0.07,2.4,1.11,0,">1 nonsynonymous","N107H T201N",2
"lib2","SARS-CoV-2","CCTATAGGCGTATTTG",9,101.7,9.57,-1.26,0.08,1.87,1.03,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","CCTATAGTACAACAAG",4,81.61,8.89,-1.94,0.07,2.49,1.07,0,">1 nonsynonymous","G146R S184K",2
"lib2","SARS-CoV-2","CCTATATAAAATTATC",6,89.35,10.79,-0.05,0.05,2.93,1.08,0,">1 nonsynonymous","C61F L122S",2
"lib2","SARS-CoV-2","CCTATATACAGCACTA",2,7.71,9.9,-0.93,0.08,2.12,1,0,">1 nonsynonymous","I2V C49Y",2
"lib2","SARS-CoV-2","CCTATATACAGTAATG",4,2.53,NA,NA,NA,NA,NA,NA,"stop","S41P Q168*",2
"lib2","SARS-CoV-2","CCTATATGAAAGTTAT",3,39.16,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R124S S129N Y143D",3
"lib2","SARS-CoV-2","CCTATATGCGAAAATT",1,7.28,10.64,-0.19,0.14,2.8,1.24,0.01,">1 nonsynonymous","C61S T201Y",2
"lib2","SARS-CoV-2","CCTATATTCGCTCGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","N13*",1
"lib2","SARS-CoV-2","CCTATCAAAAACGGAG",7,13.3,6,-4.84,2,3,1.04,0,">1 nonsynonymous","Y39A Y123L S129L N157Y P197K",5
"lib2","SARS-CoV-2","CCTATCAAACCTAGAA",1,63.77,10.32,-0.52,0.07,2.76,1.04,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","CCTATCAAAGACCAGA",11,163.72,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S45L N157S Q168V K198M",4
"lib2","SARS-CoV-2","CCTATCAAGCATAAAA",6,76.24,8.61,-2.22,0.08,2.7,1.04,0,">1 nonsynonymous","L60D G166W",2
"lib2","SARS-CoV-2","CCTATCAAGGCAGGAG",3,52.41,10.88,0.04,0.06,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTATCACAACACACC",3,29.67,10.95,0.11,0.09,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTATCACTAACTAGG",1,10.81,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","R124S G166P",2
"lib2","SARS-CoV-2","CCTATCAGCATCTACG",7,28.76,6,-4.84,1.68,1.5,1.09,0.02,">1 nonsynonymous","I88Y I138F P197L",3
"lib2","SARS-CoV-2","CCTATCCAAAATAAAT",2,19.66,6,-4.84,1.76,1.5,1.06,0.02,">1 nonsynonymous","A14V I88A",2
"lib2","SARS-CoV-2","CCTATCCAAGCTAATT",1,41.64,10.89,0.05,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTATCCACTGAATTG",1,20.47,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","Y35A S41F F47M G83S K94H A105D F156M",7
"lib2","SARS-CoV-2","CCTATCCCTAACAGAC",7,90.25,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y35P F44R P54T N107Y N118K",5
"lib2","SARS-CoV-2","CCTATCCTTAAAAGGG",12,60.25,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6F R124F",2
"lib2","SARS-CoV-2","CCTATCGAAGCATTAT",8,72.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59V I88K A105Q N151A F167E",5
"lib2","SARS-CoV-2","CCTATCGCTCTATTTT",9,84.94,7.81,-3.03,0.11,1.89,1.11,0,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CCTATCGTTGCCGGTA",1,54.35,10.48,-0.36,0.06,2.84,1.11,0,">1 nonsynonymous","A81C T201P",2
"lib2","SARS-CoV-2","CCTATCTACTAGCGAA",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I G116S",2
"lib2","SARS-CoV-2","CCTATCTATCTGACAT",4,55.03,10.83,-0.01,0.06,2.89,1.12,0,"1 nonsynonymous","P54H",1
"lib2","SARS-CoV-2","CCTATCTCTCATGGGC",4,20.06,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A33V A67P F126W F167H",4
"lib2","SARS-CoV-2","CCTATCTTAAAATGAG",7,51.35,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A67I A89K D112L G117I N151I K199N",6
"lib2","SARS-CoV-2","CCTATCTTAAGCACAA",12,56.38,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7R D112S K132S Y143R S164L",5
"lib2","SARS-CoV-2","CCTATCTTAAGGATAT",6,35.89,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","P7S V77L P133T P161T",4
"lib2","SARS-CoV-2","CCTATGAATATAATGA",2,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F Y91S W106S F160V K199C",5
"lib2","SARS-CoV-2","CCTATGACATCATTCT",5,46.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F47M G86Y D97E Y159P",4
"lib2","SARS-CoV-2","CCTATGAGACCTCTCA",4,14.93,6.3,-4.54,0.41,1.5,1.05,0.02,">1 nonsynonymous","F17R N64M F126T N151E",4
"lib2","SARS-CoV-2","CCTATGAGCATGACCT",22,410.92,9.02,-1.81,0.06,2.59,1.11,0,"1 nonsynonymous","A145N",1
"lib2","SARS-CoV-2","CCTATGAGCTTATCAT",3,44.81,10.23,-0.61,0.04,2.96,1.04,0,">1 nonsynonymous","V37S S45T Y91F I142P T201V",5
"lib2","SARS-CoV-2","CCTATGATAATTATTA",6,0.07,NA,NA,NA,NA,NA,NA,"stop","Y50F A145*",2
"lib2","SARS-CoV-2","CCTATGATACAACAGC",1,7.6,7.49,-3.34,0.38,1.5,1.15,0.04,">1 nonsynonymous","L38S T170F",2
"lib2","SARS-CoV-2","CCTATGCAATAAGATG",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A18D C102T G174M",4
"lib2","SARS-CoV-2","CCTATGCAATCAAAAT",21,299.47,10.73,-0.11,0.04,2.94,1.05,0,">1 nonsynonymous","K26Q G51N D97I",3
"lib2","SARS-CoV-2","CCTATGCATATAGAAT",3,14.06,6.5,-4.33,0.69,1.5,1.13,0.05,">1 nonsynonymous","P54M P82L Y119G S147R",4
"lib2","SARS-CoV-2","CCTATGCCAATAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41A F62G L95* K128V",4
"lib2","SARS-CoV-2","CCTATGCGAAATTTTA",3,49.83,6.1,-4.74,0.94,1.5,1.15,0.02,">1 nonsynonymous","S36C R124H S164H",3
"lib2","SARS-CoV-2","CCTATGCGCCGTTCTG",2,32.92,8.75,-2.08,0.12,3,1.09,0,">1 nonsynonymous","A14K K87I Y119N S200D",4
"lib2","SARS-CoV-2","CCTATGGAAAGTATAT",24,324.94,10.81,-0.03,0.04,2.84,1.12,0,"1 nonsynonymous","A42E",1
"lib2","SARS-CoV-2","CCTATGGAAATCATCT",13,182.86,10.56,-0.27,0.06,2.86,1.1,0,"1 nonsynonymous","T85E",1
"lib2","SARS-CoV-2","CCTATGGAGGCTTGGA",1,1.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","CCTATGTAGACACAGC",4,1.45,NA,NA,NA,NA,NA,NA,"stop","L122* G152I",2
"lib2","SARS-CoV-2","CCTATGTCGAAGGGTT",1,49.05,8.31,-2.52,0.13,2.5,1.01,0.01,">1 nonsynonymous","V115R N157Y",2
"lib2","SARS-CoV-2","CCTATGTTACAAACGT",7,88.06,10.65,-0.18,0.06,2.67,1.14,0,">1 nonsynonymous","C61V D90N",2
"lib2","SARS-CoV-2","CCTATGTTCCTAACGT",1,10.74,6,-4.84,1.2,3,1.14,0.01,">1 nonsynonymous","G51V N107S F185M",3
"lib2","SARS-CoV-2","CCTATTACCATGCAGC",4,0.64,NA,NA,NA,NA,NA,NA,"stop","L5V F17M K26* N120S",4
"lib2","SARS-CoV-2","CCTATTACCTCCGTAA",11,0.51,NA,NA,NA,NA,NA,NA,"stop","T100* I104S T148A K199T",4
"lib2","SARS-CoV-2","CCTATTAGATCTATCG",5,47.17,6,-4.83,1.14,1.5,1.23,0.02,">1 nonsynonymous","I28R Y39S L57T",3
"lib2","SARS-CoV-2","CCTATTAGTTTACTGT",7,74.45,9.63,-1.2,0.09,1.94,1.11,0,">1 nonsynonymous","R25S D34N N120A",3
"lib2","SARS-CoV-2","CCTATTATAAAGACGC",4,2.31,NA,NA,NA,NA,NA,NA,"stop","K56* D97P",2
"lib2","SARS-CoV-2","CCTATTATCGCTATTG",9,1.58,NA,NA,NA,NA,NA,NA,"stop","D97W S113*",2
"lib2","SARS-CoV-2","CCTATTCAACACTTCC",10,152,6.68,-4.16,0.33,1.5,1.17,0.02,">1 nonsynonymous","G9S S29E L162S",3
"lib2","SARS-CoV-2","CCTATTCACAGACAAG",2,29.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80M P133K",2
"lib2","SARS-CoV-2","CCTATTCACCGATATA",6,26.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F12E V77L V103M N118H Q168L",5
"lib2","SARS-CoV-2","CCTATTCCGTCCAACA",9,62.68,9.59,-1.24,0.06,1.95,1.06,0,">1 nonsynonymous","F17I Y35T",2
"lib2","SARS-CoV-2","CCTATTCGATATGAGC",3,40.62,8.71,-2.12,0.12,2.69,1.09,0.01,">1 nonsynonymous","F12L G166W",2
"lib2","SARS-CoV-2","CCTATTCGCTCAAACA",1,25.83,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P161I V181T T201V",3
"lib2","SARS-CoV-2","CCTATTGACCTTACCT",4,64.55,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N24P C158T",2
"lib2","SARS-CoV-2","CCTATTGATATACAAG",25,453.47,10.66,-0.17,0.01,2.91,1.08,0,">1 nonsynonymous","A33Y A192V",2
"lib2","SARS-CoV-2","CCTATTGCGAGGGATG",7,1.01,NA,NA,NA,NA,NA,NA,"stop","C6P N92*",2
"lib2","SARS-CoV-2","CCTATTGTGCAAAGAG",3,11.97,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","C49L K94P T201S",3
"lib2","SARS-CoV-2","CCTATTGTTTTCGCCG",15,137,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S19F W106L N171Q Y178E",4
"lib2","SARS-CoV-2","CCTATTTAAGAGAAAA",12,10.39,10.47,-0.36,0.29,2.51,1.18,0.01,">1 nonsynonymous","A33N A89M",2
"lib2","SARS-CoV-2","CCTATTTATAAACACG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P197K",1
"lib2","SARS-CoV-2","CCTATTTGAAATCTGG",1,9.7,NA,NA,NA,NA,NA,0.31,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","CCTATTTTACTGACTG",14,90.75,9.36,-1.48,0.07,1.85,1.1,0,">1 nonsynonymous","K56Y C61I D90G",3
"lib2","SARS-CoV-2","CCTATTTTGTCGAAGC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","E10L I28D E141* K198C",4
"lib2","SARS-CoV-2","CCTCAAAAAAGCATAA",10,80.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D Y39T K94I",3
"lib2","SARS-CoV-2","CCTCAAAAAATACATA",14,70.03,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R27C I72N",2
"lib2","SARS-CoV-2","CCTCAAAAACTGGATA",3,29.2,10.07,-0.77,0.09,2.72,1.05,0.01,"1 nonsynonymous","N13C",1
"lib2","SARS-CoV-2","CCTCAAAAATGAGCGA",7,10.5,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1Y N58F D97K I138L N151L L183Y",6
"lib2","SARS-CoV-2","CCTCAAACAGACATAT",1,39.79,10.92,0.08,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCAAACCGTCCGTA",3,68.63,6,-4.84,2,3,1.07,0,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","CCTCAAACCGTTGCGG",8,156.58,8.44,-2.39,0.1,2.1,1.06,0,">1 nonsynonymous","S43Y Y165S",2
"lib2","SARS-CoV-2","CCTCAAACTGTTTAAC",3,100.04,10.3,-0.53,0.03,2.86,1.08,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","CCTCAAAGCAGCTTGT",7,97.75,8.72,-2.12,0.08,1.82,1.1,0,">1 nonsynonymous","Y35E G155L",2
"lib2","SARS-CoV-2","CCTCAAATAACCAGCA",3,35.3,10.31,-0.53,0.04,2.94,1.07,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CCTCAAATATGCCGCT",4,1.95,NA,NA,NA,NA,NA,NA,"stop","L5S A42T G51A K87* W106V I138F T148K C195S",8
"lib2","SARS-CoV-2","CCTCAAATTTAAAAGC",7,0.96,NA,NA,NA,NA,NA,NA,"stop","L38E G146H G152*",3
"lib2","SARS-CoV-2","CCTCAACACATGTATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E P96F T100V N107R",4
"lib2","SARS-CoV-2","CCTCAACATTAGGCTA",5,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L Y178I C195F",3
"lib2","SARS-CoV-2","CCTCAACCCTTAAATA",4,23.57,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D90Y F99P F126G F134R L188R K199I",6
"lib2","SARS-CoV-2","CCTCAACCTATAGCGA",5,0,NA,NA,NA,NA,NA,NA,"stop","T3* P82Q",2
"lib2","SARS-CoV-2","CCTCAACGCGGGAAAT",4,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N N13E W106L T148Y Q168H",5
"lib2","SARS-CoV-2","CCTCAAGAAGTATAGT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","K56* L122I",2
"lib2","SARS-CoV-2","CCTCAAGACGATTAAT",2,13.72,9.91,-0.93,0.11,2.74,1.12,0.01,">1 nonsynonymous","I104L G116T P149F A190P",4
"lib2","SARS-CoV-2","CCTCAAGGGGCACTCT",2,24.7,8.49,-2.35,0.14,2.01,1.08,0.01,">1 nonsynonymous","C31F N118M K199Y",3
"lib2","SARS-CoV-2","CCTCAAGTTTAGAACA",1,67.56,6,-4.84,1.74,1.5,1.19,0.03,">1 nonsynonymous","S36F V37H T55H N110L F167K Q176N",6
"lib2","SARS-CoV-2","CCTCAATACAGGAGAT",3,37.03,8.18,-2.66,0.19,1.5,1,0.02,">1 nonsynonymous","G86D N151T",2
"lib2","SARS-CoV-2","CCTCAATACCGACAGA",5,66.77,10.77,-0.07,0.06,2.99,1.04,0,">1 nonsynonymous","N4D S41Q",2
"lib2","SARS-CoV-2","CCTCAATAGTTTCAGA",22,134.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D112R Y119Q E154L",3
"lib2","SARS-CoV-2","CCTCAATCAAAAGATT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","CCTCAATCCATTGACA",5,109.97,10.24,-0.59,0.07,2.69,1.06,0,">1 nonsynonymous","S36D E135Y",2
"lib2","SARS-CoV-2","CCTCAATCGTAACCGA",15,366.88,9.03,-1.81,0.04,2.82,1.07,0,">1 nonsynonymous","K114L G146Q",2
"lib2","SARS-CoV-2","CCTCACACCAGCATTT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","Y50* G83N I88K Q163Y",4
"lib2","SARS-CoV-2","CCTCACACTAGACGAT",1,22.56,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","S41Q Y93Q L162Y Y178L",4
"lib2","SARS-CoV-2","CCTCACACTATCAATG",4,33.97,6.36,-4.47,0.74,1.5,1.11,0.04,">1 nonsynonymous","G51T A105V Y119L S147V",4
"lib2","SARS-CoV-2","CCTCACAGAAATTCAT",8,119.61,10.77,-0.07,0.03,2.94,1.07,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","CCTCACATACAATGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C31F T63* G101D T201K",4
"lib2","SARS-CoV-2","CCTCACATACACCTGC",6,31.01,7.15,-3.69,0.39,1.5,1.25,0.03,">1 nonsynonymous","V11L K128Y F167L",3
"lib2","SARS-CoV-2","CCTCACATACTACAAA",2,14.95,6,-4.84,2,3,1.06,0,">1 nonsynonymous","G9H S45F C102V N107T",4
"lib2","SARS-CoV-2","CCTCACATCCGAAAAA",8,76.2,10.31,-0.53,0.03,2.88,1.09,0,">1 nonsynonymous","G9S R16G L122Y N171C",4
"lib2","SARS-CoV-2","CCTCACATCCGGACAG",1,8.9,9.15,-1.68,0.38,2.05,1,0.04,">1 nonsynonymous","S41P Y123S D137R",3
"lib2","SARS-CoV-2","CCTCACATGTCGCAGG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16W W106E L122F T201M",4
"lib2","SARS-CoV-2","CCTCACATTACACTAC",1,7.07,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","T55C N64H E141V C150D N157W R179C S200E",7
"lib2","SARS-CoV-2","CCTCACCAGACCATAA",1,28.65,10.74,-0.09,0.05,2.99,1.01,0,">1 nonsynonymous","T140G Y178F",2
"lib2","SARS-CoV-2","CCTCACCATGATATTT",5,13.35,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","E10M D90V Y121D C158D T170L",5
"lib2","SARS-CoV-2","CCTCACCGACCACCAA",2,2.21,NA,NA,NA,NA,NA,NA,"stop","F17* S53G E141S",3
"lib2","SARS-CoV-2","CCTCACGAAGATTTAG",13,66.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2N C49F N92T T100Y",4
"lib2","SARS-CoV-2","CCTCACGAGTACTATA",3,26.92,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","E10K R25L A33T K56G K87E",5
"lib2","SARS-CoV-2","CCTCACGATGAAAGCC",5,0,NA,NA,NA,NA,NA,NA,"stop","S41K C49F A145V V181* K199M",5
"lib2","SARS-CoV-2","CCTCACGCATCCTTTA",7,63.07,8.45,-2.38,0.19,1.5,1.02,0.02,">1 nonsynonymous","F8R D90R",2
"lib2","SARS-CoV-2","CCTCACGGAACCGTTC",8,5.04,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib2","SARS-CoV-2","CCTCACGGCACCGGTG",1,44.08,10.79,-0.04,0.06,2.9,1.12,0,">1 nonsynonymous","P54L S129R",2
"lib2","SARS-CoV-2","CCTCACTCCTAGGCAA",4,35.46,10.62,-0.22,0.04,3,1.01,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","CCTCACTCCTGATTGC",10,5.44,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","Y35F Y50S N107L V182E",4
"lib2","SARS-CoV-2","CCTCACTGAATGACAC",11,88.54,9.56,-1.28,0.07,1.91,1.08,0,">1 nonsynonymous","N4S S45L K128Y V173F",4
"lib2","SARS-CoV-2","CCTCACTTCCGTCGAC",7,42.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44H D68E A81C",3
"lib2","SARS-CoV-2","CCTCACTTGAGTATTG",4,70.39,10.64,-0.2,0.03,3,1.01,0,">1 nonsynonymous","T63G L122Y P149K",3
"lib2","SARS-CoV-2","CCTCACTTGCATTAAT",4,58.64,10.46,-0.37,0.05,2.92,1.05,0,">1 nonsynonymous","T85A I142F",2
"lib2","SARS-CoV-2","CCTCAGAAGCACCTTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q163F",1
"lib2","SARS-CoV-2","CCTCAGAGTTTCATTA",3,5.12,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","D34A I88T D98T",3
"lib2","SARS-CoV-2","CCTCAGCAATCATTCC",4,0.59,NA,NA,NA,NA,NA,NA,"stop","C61* F99L E154L",3
"lib2","SARS-CoV-2","CCTCAGCCAATCGAGT",9,25.78,6,-4.84,2,1.5,1.28,0.08,">1 nonsynonymous","G86P N151S G174K",3
"lib2","SARS-CoV-2","CCTCAGCCTATCGCTT",1,18.06,10.71,-0.13,0.08,3,1.02,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","CCTCAGGACAGACCGG",3,83.1,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S41K D68P Q144R Q176T",4
"lib2","SARS-CoV-2","CCTCAGGAGTGGGCCA",3,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68L F156R",2
"lib2","SARS-CoV-2","CCTCAGGCACCCCTAA",1,16.12,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","F12S I88N L111G",3
"lib2","SARS-CoV-2","CCTCAGGCAGTTCTCT",3,380.82,10.86,0.02,0.04,3,1.02,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","CCTCAGGTAAATGCAG",2,10.28,6.36,-4.48,0.34,3,1.21,0.01,">1 nonsynonymous","D34P A89D F99P R136V P149K F160N",6
"lib2","SARS-CoV-2","CCTCAGGTTCAAGTTG",17,80,10.63,-0.2,0.05,2.85,1.12,0,"1 nonsynonymous","E10P",1
"lib2","SARS-CoV-2","CCTCAGTTTATTTAAA",1,21.39,9.31,-1.53,0.06,3,1.06,0,">1 nonsynonymous","Y119S P133A",2
"lib2","SARS-CoV-2","CCTCATAAAGTAAGTC",7,48.64,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N107V N157P",2
"lib2","SARS-CoV-2","CCTCATAACATTGGCT",4,6.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y L95R I104C Y119S",4
"lib2","SARS-CoV-2","CCTCATAACGTACGTA",6,68.22,10.78,-0.05,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTCATACAACACGAT",5,74.49,10.3,-0.54,0.07,2.9,1.04,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","CCTCATACCCCCTACA",5,1.25,NA,NA,NA,NA,NA,NA,"stop","F47* L95K V182I",3
"lib2","SARS-CoV-2","CCTCATAGTTAACCGG",1,9.46,10.64,-0.19,0.1,2.92,1.04,0.01,">1 nonsynonymous","T55D L60K N109L",3
"lib2","SARS-CoV-2","CCTCATATGATCGTAC",2,72.95,10.21,-0.62,0.05,2.84,1.06,0,">1 nonsynonymous","T15S G146W",2
"lib2","SARS-CoV-2","CCTCATATGGCAGGAA",1,37.94,10.25,-0.58,0.07,2.64,1.05,0,">1 nonsynonymous","F47V I138K A190W",3
"lib2","SARS-CoV-2","CCTCATCACAAACGAA",4,90.9,6,-4.84,0.62,1.5,1.14,0,">1 nonsynonymous","T148R C158F",2
"lib2","SARS-CoV-2","CCTCATCACATTTTAA",3,55.27,10.95,0.11,0.06,2.85,1.15,0,"1 nonsynonymous","F160K",1
"lib2","SARS-CoV-2","CCTCATCACCAATTTT",7,132.72,6.17,-4.67,0.55,1.5,1.1,0.01,">1 nonsynonymous","L38S F47V D112E",3
"lib2","SARS-CoV-2","CCTCATCATAAGGAAG",6,76.86,6.42,-4.42,0.66,1.5,1.19,0.03,">1 nonsynonymous","I2K Y39R C150R S200R",4
"lib2","SARS-CoV-2","CCTCATGATTGTCAAA",9,61.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44M F62N E76Y D90S",4
"lib2","SARS-CoV-2","CCTCATGGCTCAATAG",9,184.51,10.81,-0.02,0.04,2.97,1.05,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","CCTCATGGGTCACAAT",2,14.67,10.76,-0.07,0.06,2.96,1.08,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","CCTCATTAGCAATCCC",4,44.56,8.81,-2.02,0.07,2.96,1.04,0,">1 nonsynonymous","F126R L187M L188M",3
"lib2","SARS-CoV-2","CCTCATTGTCCAATAT",1,13.86,10.64,-0.2,0.08,2.93,1.05,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","CCTCCAAAAAGCCAAA",2,15.78,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N58F A89E P96V A190I",4
"lib2","SARS-CoV-2","CCTCCAAAACCACCCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","S53* L60P A145S",3
"lib2","SARS-CoV-2","CCTCCAAAATAATTTA",4,36.94,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1T R25V V65E",3
"lib2","SARS-CoV-2","CCTCCAAAATTCGACA",9,88.15,10.84,0,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCCAAACCGCCAAT",2,49.14,9.35,-1.49,0.06,2.88,1.05,0,"1 nonsynonymous","A145F",1
"lib2","SARS-CoV-2","CCTCCAACATAATTTC",5,67.63,10.86,0.02,0.05,2.98,1.04,0,">1 nonsynonymous","S41R F62T Q163A",3
"lib2","SARS-CoV-2","CCTCCAACATTAACAC",1,49.06,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F167L Y178A K198W",3
"lib2","SARS-CoV-2","CCTCCAAGTAAGCCAT",4,80.99,10.75,-0.08,0.05,2.93,1.04,0,"1 nonsynonymous","Y123S",1
"lib2","SARS-CoV-2","CCTCCAATAGTATAAC",10,221.25,9.97,-0.87,0.04,2.74,1.08,0,">1 nonsynonymous","C6F T100L P149T",3
"lib2","SARS-CoV-2","CCTCCAATTGCATATA",8,14.11,6.07,-4.77,0.73,3,1.27,0.01,">1 nonsynonymous","A14R C102G A105R R127C",4
"lib2","SARS-CoV-2","CCTCCACAAAAGACCT",20,720.85,9.58,-1.25,0.03,2.9,1.06,0,">1 nonsynonymous","K56S T170R",2
"lib2","SARS-CoV-2","CCTCCACAATCCAATA",2,1.55,NA,NA,NA,NA,NA,NA,"stop","A42* A89S C150T",3
"lib2","SARS-CoV-2","CCTCCACCGTATTATG",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77G P96D S184N",3
"lib2","SARS-CoV-2","CCTCCACGGCTTTTAT",3,24.81,10.69,-0.15,0.1,2.91,1.1,0,">1 nonsynonymous","D97S F160T",2
"lib2","SARS-CoV-2","CCTCCACTCATTATAC",2,34.26,10.9,0.06,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCCAGAGGCCCGCA",1,35.89,10.76,-0.07,0.06,2.97,1.07,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","CCTCCAGTCGGGAACC",4,0,NA,NA,NA,NA,NA,NA,"stop","K94* E135G",2
"lib2","SARS-CoV-2","CCTCCAGTGTACAAAA",9,40.06,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F62W F99R P177A",3
"lib2","SARS-CoV-2","CCTCCAGTTAATTCGG",8,120.52,6,-4.84,0.78,1.5,1.11,0,">1 nonsynonymous","T55N N64K K114H Y159R",4
"lib2","SARS-CoV-2","CCTCCATCACACAGAG",12,97.56,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3M A33E R124H E141N",4
"lib2","SARS-CoV-2","CCTCCATTGAAGATGA",13,5.18,NA,NA,NA,NA,NA,NA,"stop","L60* E76A F167G K198T",4
"lib2","SARS-CoV-2","CCTCCCAATTGGTTAA",24,241.31,9.84,-0.99,0.06,2.18,1.03,0,">1 nonsynonymous","A14T S43W E141I",3
"lib2","SARS-CoV-2","CCTCCCACCCTTCATA",10,134.96,9.91,-0.92,0.08,2.35,1.05,0,">1 nonsynonymous","G9W S36P D90S",3
"lib2","SARS-CoV-2","CCTCCCACGAAAATAA",2,24.8,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L60R V77R A81T D97R",4
"lib2","SARS-CoV-2","CCTCCCATAGCCACTA",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I N13K N107T D112S",4
"lib2","SARS-CoV-2","CCTCCCCAAACTGAAA",4,17.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56A G86D D137P S200V",4
"lib2","SARS-CoV-2","CCTCCCCAGATAGCGC",7,86.01,10.91,0.07,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCCCCTTGATCGAG",1,35.13,10.49,-0.35,0.05,2.94,1.09,0,">1 nonsynonymous","V37Y T148C",2
"lib2","SARS-CoV-2","CCTCCCTGACGGAAAC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CCTCCCTGTACAAAGC",12,108,10.84,0,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCCCTTGGCAATAG",10,66.48,9.4,-1.44,0.22,1.56,1.11,0.02,">1 nonsynonymous","R25A K198R",2
"lib2","SARS-CoV-2","CCTCCGAAGTTATAAC",11,109.41,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V32S F99V I104L A145V P169V",5
"lib2","SARS-CoV-2","CCTCCGACAAAAGACG",7,4.54,NA,NA,NA,NA,NA,NA,"stop","S29A T100H T148R G174*",4
"lib2","SARS-CoV-2","CCTCCGACTGGCAATG",2,5.52,6,-4.84,2,1.5,1,0,">1 nonsynonymous","E141L C158V",2
"lib2","SARS-CoV-2","CCTCCGATAAGCGCCA",7,2.1,NA,NA,NA,NA,NA,NA,"stop","R27T P54*",2
"lib2","SARS-CoV-2","CCTCCGATGGAACGCC",2,1.18,NA,NA,NA,NA,NA,NA,"stop","V20C Y91* I104N V181M",4
"lib2","SARS-CoV-2","CCTCCGATTAGAATAC",10,41.94,8,-2.83,0.26,1.5,1.04,0.02,">1 nonsynonymous","L57A A67S S129A",3
"lib2","SARS-CoV-2","CCTCCGCCTCGGACAG",5,32.21,7.13,-3.71,0.4,1.5,1.01,0.05,">1 nonsynonymous","C6R G51F G74I Y91L N107S S139V G166S",7
"lib2","SARS-CoV-2","CCTCCGGGAAACTTTT",1,5.21,NA,NA,NA,NA,NA,NA,"stop","L5* N13W F17N C31W P169A",5
"lib2","SARS-CoV-2","CCTCCGTAGGTGACGC",7,32.89,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K26L R127Y F167D",3
"lib2","SARS-CoV-2","CCTCCTAAAAGAATAA",6,4.67,NA,NA,NA,NA,NA,NA,"stop","Y121* N130V V173G",3
"lib2","SARS-CoV-2","CCTCCTAATCTCCCAA",2,152.99,10.59,-0.25,0.03,2.97,1.03,0,">1 nonsynonymous","F44I C61R",2
"lib2","SARS-CoV-2","CCTCCTAATTGTGACA",4,24.35,10.36,-0.48,0.05,2.93,1.03,0,">1 nonsynonymous","S129T F156L",2
"lib2","SARS-CoV-2","CCTCCTACGGAATGAA",7,23.69,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","V20G P54C",2
"lib2","SARS-CoV-2","CCTCCTACTAAAGTAG",2,102.57,10.24,-0.6,0.06,2.72,1.02,0,">1 nonsynonymous","R27S F44S",2
"lib2","SARS-CoV-2","CCTCCTAGATTAACAT",4,14.1,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A42K Y50R Y91G F185K",4
"lib2","SARS-CoV-2","CCTCCTAGGGAGGGCG",9,10.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T63H F99L I142T V182C",4
"lib2","SARS-CoV-2","CCTCCTATTCAGATCA",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P A14T E76S",3
"lib2","SARS-CoV-2","CCTCCTCCGGTATGCC",1,81.91,9.92,-0.91,0.04,2.72,1.04,0,">1 nonsynonymous","I2K D34T I142L",3
"lib2","SARS-CoV-2","CCTCCTCTAACCTTTA",4,90.53,9.25,-1.58,0.09,1.59,1.08,0,">1 nonsynonymous","N1G S36V S41V Y50F D90N",5
"lib2","SARS-CoV-2","CCTCCTCTAAGGTTGT",2,59.64,9.7,-1.13,0.04,2.78,1.07,0,">1 nonsynonymous","P149Q G174R",2
"lib2","SARS-CoV-2","CCTCCTCTAGCGAGAC",1,7.41,6.07,-4.77,0.23,3,1.01,0,">1 nonsynonymous","D90C R124F T140Y F167K G196S",5
"lib2","SARS-CoV-2","CCTCCTGAACATCCCG",1,55.89,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2T L60P T100Y Q168P",4
"lib2","SARS-CoV-2","CCTCCTGATAACTGGG",3,26.57,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","V32M K48S Y143K",3
"lib2","SARS-CoV-2","CCTCCTGGTTTAAAGC",6,53.66,9.72,-1.12,0.06,2.74,1.02,0,">1 nonsynonymous","Y121L K128L I138A",3
"lib2","SARS-CoV-2","CCTCCTTATCCACAAC",2,5.8,6.68,-4.15,0.56,2,1.34,0.03,">1 nonsynonymous","I2P F17G L60W V153L P161R",5
"lib2","SARS-CoV-2","CCTCCTTCAACGTGAT",4,59.3,10.88,0.04,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTCCTTTTAAGTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* G86S",2
"lib2","SARS-CoV-2","CCTCGAAAACACAAGA",7,1.56,NA,NA,NA,NA,NA,NA,"stop","F12L S19D S43* N64V P82S",5
"lib2","SARS-CoV-2","CCTCGAACCCGCCGTA",8,50.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F62V Y93P",2
"lib2","SARS-CoV-2","CCTCGAAGCGCACTGC",3,48.34,10.79,-0.05,0.05,2.96,1.07,0,">1 nonsynonymous","D98S P149K",2
"lib2","SARS-CoV-2","CCTCGAAGTTACTAGC",3,95.7,9.84,-0.99,0.09,2.45,1.04,0,">1 nonsynonymous","V65M R78S A81Y",3
"lib2","SARS-CoV-2","CCTCGAATTATTTTTT",5,0.18,NA,NA,NA,NA,NA,NA,"stop","Y35* K56N L95I R124Y Y143N",5
"lib2","SARS-CoV-2","CCTCGACAAGAAAATA",4,27.51,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A22I C61E S139N Q176E",4
"lib2","SARS-CoV-2","CCTCGACAGAGCTGTA",8,103.67,9.91,-0.92,0.02,2.29,1.06,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","CCTCGACAGGCCGGCT",4,23.76,6.07,-4.77,1.07,1.5,1.19,0.02,">1 nonsynonymous","F12H N58P L122W S147V",4
"lib2","SARS-CoV-2","CCTCGACCACAACATA",10,209.27,10.84,0,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCGACGACAGAGGA",2,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D F99R C150L V182N",4
"lib2","SARS-CoV-2","CCTCGACTATACAAAG",1,38.24,10.24,-0.6,0.07,2.93,1.04,0,"1 nonsynonymous","A67T",1
"lib2","SARS-CoV-2","CCTCGATACCAATCAT",3,82.58,10.71,-0.13,0.03,2.95,1.05,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","CCTCGATAGCAGTCCC",2,7.3,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10H C61G P96L I104M F156S",5
"lib2","SARS-CoV-2","CCTCGATCGTTGAATG",2,52.18,10.73,-0.1,0.03,2.95,1.05,0,">1 nonsynonymous","G9L A42R V173M",3
"lib2","SARS-CoV-2","CCTCGATGGTGTACCT",7,52.58,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V71Q D90I G155D",3
"lib2","SARS-CoV-2","CCTCGCAAAAGATCTA",3,53.03,9.15,-1.68,0.04,2.65,1.04,0,">1 nonsynonymous","Y35T K87N F134S",3
"lib2","SARS-CoV-2","CCTCGCAGCATGATCA",5,27.79,10.81,-0.03,0.08,2.84,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTCGCATGATTCACG",6,45.47,7.85,-2.99,0.17,1.86,1.11,0.02,">1 nonsynonymous","C6F W23F K128F",3
"lib2","SARS-CoV-2","CCTCGCATTAGGACAT",10,57.82,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","T85S L95R C150L",3
"lib2","SARS-CoV-2","CCTCGCCGGCACGCCT",6,119.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y93R N107C K132Q",3
"lib2","SARS-CoV-2","CCTCGCCTGCTGCCCT",17,7.5,NA,NA,NA,NA,NA,NA,"stop","K87* P161V E186F",3
"lib2","SARS-CoV-2","CCTCGCGAACAATAAG",7,124.63,8.49,-2.35,0.09,3,1.07,0,">1 nonsynonymous","I2Y Y35M R78L T170D",4
"lib2","SARS-CoV-2","CCTCGCTAAATGCCTT",5,103.19,10.9,0.06,0.03,2.93,1.08,0,"1 nonsynonymous","P197K",1
"lib2","SARS-CoV-2","CCTCGGAATCTACTTA",3,47.01,10.78,-0.05,0.05,2.93,1.07,0,">1 nonsynonymous","T3K C61S P149K",3
"lib2","SARS-CoV-2","CCTCGGACTTAAATGA",1,20.95,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y123I G155V G172V",3
"lib2","SARS-CoV-2","CCTCGGATGAGTAATA",3,26.38,9.09,-1.75,0.11,2.72,1.13,0.01,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","CCTCGGCAGTTGTGAA",3,70.68,10.76,-0.08,0.04,2.91,1.1,0,"1 nonsynonymous","N1V",1
"lib2","SARS-CoV-2","CCTCGGCCCGACGGCA",15,242.29,10.6,-0.23,0.03,2.96,1.05,0,">1 nonsynonymous","L122Y S129I S139N",3
"lib2","SARS-CoV-2","CCTCGGCTAATTAATG",2,28.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R73F F167N",2
"lib2","SARS-CoV-2","CCTCGGTATAGCTCCG",11,188.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y143P E154Q",2
"lib2","SARS-CoV-2","CCTCGTCAAACGACCT",7,35.25,7.77,-3.06,0.31,1.5,1,0.03,">1 nonsynonymous","C49V V173S",2
"lib2","SARS-CoV-2","CCTCGTCCGAAGGTGA",3,27.58,10.4,-0.43,0.04,2.99,1.04,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","CCTCGTCGCTTGACCT",5,24.49,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D90C C102K",2
"lib2","SARS-CoV-2","CCTCGTCGGGGTCCAC",8,223.44,6,-4.84,2,1.5,1.13,0,"1 nonsynonymous","Q176P",1
"lib2","SARS-CoV-2","CCTCGTTCGAACTAAC",5,39.69,7.18,-3.65,0.25,1.75,1.11,0.02,">1 nonsynonymous","Y35L D98F W106I Y175N",4
"lib2","SARS-CoV-2","CCTCGTTGTGACCAGG",11,12.2,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T3Y T15Q D59K P177V L187M S200T",6
"lib2","SARS-CoV-2","CCTCGTTTTTTCAAAA",5,27.89,10.47,-0.36,0.13,2.86,1.13,0.01,">1 nonsynonymous","D59P N130K",2
"lib2","SARS-CoV-2","CCTCTAAACTCTATTC",1,27.23,9.2,-1.64,0.33,1.5,1,0.03,">1 nonsynonymous","W23L N64H",2
"lib2","SARS-CoV-2","CCTCTAAAGCCAATCA",9,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127T T148G Y175S",3
"lib2","SARS-CoV-2","CCTCTAAATATGCCTT",5,1.1,NA,NA,NA,NA,NA,NA,"stop","S69* K87* D98F A145T",4
"lib2","SARS-CoV-2","CCTCTAAATCAATCAA",2,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L G86D R127S",3
"lib2","SARS-CoV-2","CCTCTAACCCGTGCGC",1,36.47,10.96,0.12,0.07,2.88,1.13,0,"1 nonsynonymous","N151R",1
"lib2","SARS-CoV-2","CCTCTAAGTACAACTT",8,58.86,10.33,-0.51,0.13,2.79,1.06,0.01,">1 nonsynonymous","N110G T140R N151I",3
"lib2","SARS-CoV-2","CCTCTACACTGGTATC",10,124.92,9.93,-0.91,0.06,2.64,1.02,0,">1 nonsynonymous","V65L Y91V",2
"lib2","SARS-CoV-2","CCTCTACCCAAAAATA",6,214.72,8.04,-2.8,0.12,2.27,1.07,0.01,">1 nonsynonymous","L125D Y143W",2
"lib2","SARS-CoV-2","CCTCTACGACAAACCA",14,175.39,9.76,-1.08,0.06,2.24,1.08,0,">1 nonsynonymous","S19A S53A E186P T201L",4
"lib2","SARS-CoV-2","CCTCTACGCCACAAAG",2,1.68,NA,NA,NA,NA,NA,NA,"stop","Q84* E154V Q168P",3
"lib2","SARS-CoV-2","CCTCTACTTCGGCACG",12,200.56,10.24,-0.6,0.05,2.84,1.04,0,">1 nonsynonymous","V37W Q79K",2
"lib2","SARS-CoV-2","CCTCTATAACTTACAT",10,76.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6N V77F I88P P133R S147F",5
"lib2","SARS-CoV-2","CCTCTATGATATCTCA",15,91.78,7.52,-3.32,0.36,1.5,1.1,0.03,">1 nonsynonymous","G86Q K128L",2
"lib2","SARS-CoV-2","CCTCTCAACGCATAAC",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S E10T K114Y F167C",4
"lib2","SARS-CoV-2","CCTCTCAATCCATTAC",3,65.35,10.21,-0.63,0.04,2.88,1.09,0,">1 nonsynonymous","N4Y N30E",2
"lib2","SARS-CoV-2","CCTCTCAGGGACCCGT",2,60.85,10.77,-0.07,0.1,2.76,1.08,0,"1 nonsynonymous","A190F",1
"lib2","SARS-CoV-2","CCTCTCCAAGTTCCTA",5,107.43,10.24,-0.59,0.02,2.91,1.06,0,"1 nonsynonymous","N118A",1
"lib2","SARS-CoV-2","CCTCTCCCAATTTAAA",3,19.06,10.29,-0.55,0.06,2.74,1.01,0,">1 nonsynonymous","K56L D90T",2
"lib2","SARS-CoV-2","CCTCTCCCTTCACCTT",22,120.5,6.04,-4.79,0.54,1.5,1.14,0.01,">1 nonsynonymous","F12L A14K G101S G152T",4
"lib2","SARS-CoV-2","CCTCTCCTTGAACTAT",4,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N L60Q G155V Q168R",4
"lib2","SARS-CoV-2","CCTCTCGAAAATCGTT",5,6.14,6.24,-4.59,0.62,2.57,1.17,0.02,">1 nonsynonymous","N13F Y93G T140E F156S G174L",5
"lib2","SARS-CoV-2","CCTCTCGGAACCCAAC",2,0.46,NA,NA,NA,NA,NA,NA,"stop","I104M Y178* L188R",3
"lib2","SARS-CoV-2","CCTCTCGTACTGGAAC",1,13.6,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","D34P K94E",2
"lib2","SARS-CoV-2","CCTCTCTCCTAAGATT",9,120.42,10.77,-0.07,0.05,2.93,1.08,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","CCTCTCTTGCCCCTTA",7,301.53,10.73,-0.11,0.03,2.98,1.04,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","CCTCTGAAACCGAATG",3,33.71,8.67,-2.17,0.12,2.82,1.07,0,">1 nonsynonymous","Y91M A145K",2
"lib2","SARS-CoV-2","CCTCTGAAACCGTACT",7,87.36,8,-2.83,0.14,1.5,1.09,0.01,">1 nonsynonymous","L5N A42G I88A P149S G174S",5
"lib2","SARS-CoV-2","CCTCTGAACACACGCC",4,26.19,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13F T63Q F70L I104V Q176P",5
"lib2","SARS-CoV-2","CCTCTGACTCTAAGGA",2,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L A81S G86F V103T Y121I",5
"lib2","SARS-CoV-2","CCTCTGCATGGATAGT",6,69.26,9.98,-0.86,0.06,2.65,1.07,0,">1 nonsynonymous","K56I Y91H",2
"lib2","SARS-CoV-2","CCTCTGTACACCAGCA",1,18.27,10.94,0.1,0.07,2.98,1,0,"1 nonsynonymous","P54V",1
"lib2","SARS-CoV-2","CCTCTGTCCTCCCGAG",2,13.74,10.22,-0.62,0.1,2.75,1.08,0.01,">1 nonsynonymous","L5P Y91F I104T G152A",4
"lib2","SARS-CoV-2","CCTCTGTGAACTGTCC",12,139.47,9.52,-1.31,0.05,2.12,1.09,0,">1 nonsynonymous","T63A N107S L131V",3
"lib2","SARS-CoV-2","CCTCTTAAACCCTGTA",3,139.72,9.01,-1.83,0.06,2.61,1.09,0,">1 nonsynonymous","L38I D90K P169D",3
"lib2","SARS-CoV-2","CCTCTTAACAACGCTT",3,33.53,10.33,-0.51,0.06,2.86,1.1,0,">1 nonsynonymous","I28V T85V",2
"lib2","SARS-CoV-2","CCTCTTACCCCATAAA",12,50.18,6.06,-4.77,1.32,1.5,1.29,0.04,">1 nonsynonymous","F99Q N151I",2
"lib2","SARS-CoV-2","CCTCTTATAACAAGAA",8,71.09,10.73,-0.1,0.04,2.92,1.1,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","CCTCTTATACCCGATG",10,229.52,10.83,-0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTCTTATCCCGCCGT",10,176.99,10.8,-0.03,0.04,2.95,1.06,0,">1 nonsynonymous","L5Q R27M",2
"lib2","SARS-CoV-2","CCTCTTCTATCAATCA",2,0.48,NA,NA,NA,NA,NA,NA,"stop","N13I V37* V103H F156L S164L",5
"lib2","SARS-CoV-2","CCTCTTCTTGTCAGAC",3,40.67,10.79,-0.05,0.04,3,1.01,0,"1 nonsynonymous","N4M",1
"lib2","SARS-CoV-2","CCTCTTGACGAGACCT",13,257.33,10.45,-0.39,0.03,2.88,1.04,0,">1 nonsynonymous","S41Y G83W",2
"lib2","SARS-CoV-2","CCTCTTGGCAACACTA",3,47.35,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I28K L60T G155V",3
"lib2","SARS-CoV-2","CCTCTTTAATAAAACT",14,84.94,6.94,-3.9,0.38,1.5,1.15,0.02,">1 nonsynonymous","F62Y Y93M",2
"lib2","SARS-CoV-2","CCTCTTTCCAAGCATA",6,132.44,10.46,-0.38,0.03,2.94,1.03,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","CCTCTTTCCCTGGTAA",5,35.72,6.25,-4.58,0.63,1.5,1.08,0.03,">1 nonsynonymous","A33E Y39M F44Y D59V G83V N109F R124S G146M",8
"lib2","SARS-CoV-2","CCTCTTTGTACGTCCA",1,10.23,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","C49S D98R P177S T201A",4
"lib2","SARS-CoV-2","CCTCTTTTGACATGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib2","SARS-CoV-2","CCTGAAAAGAGTCAGT",6,107.31,10.17,-0.67,0.04,2.88,1.07,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","CCTGAAACATATAAGG",2,26.05,6.76,-4.08,0.47,1.5,1.12,0.04,">1 nonsynonymous","Y39F Q144H Y165V",3
"lib2","SARS-CoV-2","CCTGAAACCGCTATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","A14S L57F G86* L122E",4
"lib2","SARS-CoV-2","CCTGAAACCTGGCATT",4,46.36,6.1,-4.74,0.78,1.5,1.19,0.01,">1 nonsynonymous","K26L F44S I138P F167I R179F",5
"lib2","SARS-CoV-2","CCTGAAAGATGCCACC",6,13.27,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L60M R73W C102R W106T S113V G146L",6
"lib2","SARS-CoV-2","CCTGAAAGGTCCAATG",15,143.07,6.09,-4.75,0.77,1.5,1.19,0.01,">1 nonsynonymous","Y93S D98Y V115C F160V Q168K",5
"lib2","SARS-CoV-2","CCTGAAAGTATTTTAA",4,57.35,8.63,-2.21,0.07,2.91,1.09,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","CCTGAAAGTCACCACT",1,7.35,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y93V R127I F134V",3
"lib2","SARS-CoV-2","CCTGAAATAACCAAAA",10,84.42,9.58,-1.26,0.11,1.77,1.07,0,">1 nonsynonymous","T15Q G51V",2
"lib2","SARS-CoV-2","CCTGAAATACCCCACT",4,5.94,NA,NA,NA,NA,NA,NA,"stop","L5S A33R V71* A105M G117L",5
"lib2","SARS-CoV-2","CCTGAAATGATACAAT",11,267.79,8.84,-1.99,0.04,2.97,1.08,0,">1 nonsynonymous","Y119Q E154D",2
"lib2","SARS-CoV-2","CCTGAAATTAAACTAT",4,76.73,10.17,-0.66,0.08,2.62,1.02,0,">1 nonsynonymous","P54R F99L",2
"lib2","SARS-CoV-2","CCTGAACCAGAAAACT",3,80.67,10.6,-0.23,0.05,2.84,1.12,0,">1 nonsynonymous","C61S D90E C195M",3
"lib2","SARS-CoV-2","CCTGAACCAGAAGTAT",2,91.18,10.73,-0.1,0.05,2.89,1.1,0,">1 nonsynonymous","C61R N151M",2
"lib2","SARS-CoV-2","CCTGAACCCAACAATA",2,24.25,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10G L38R G101L V182D",4
"lib2","SARS-CoV-2","CCTGAACGCTTTAAAT",2,40.32,6,-4.84,1.42,1.5,1.09,0.01,">1 nonsynonymous","K87S C150D N151K",3
"lib2","SARS-CoV-2","CCTGAAGGCATCAGCC",4,101.97,10.59,-0.25,0.08,2.8,1.05,0,">1 nonsynonymous","T55K T100N C195L",3
"lib2","SARS-CoV-2","CCTGAATAACGCAGCA",2,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I E10Y C61Q T100K D137Q P149Y K198Q",7
"lib2","SARS-CoV-2","CCTGAATGGATCCCCA",3,0.92,NA,NA,NA,NA,NA,NA,"stop","S41F L57S R73A Q84* F99L G146T L187V A190N",8
"lib2","SARS-CoV-2","CCTGAATTAGAAAAGA",11,78.96,6.06,-4.77,0.59,1.5,1.15,0.01,">1 nonsynonymous","Y50P D90L",2
"lib2","SARS-CoV-2","CCTGAATTGTGCCCAG",7,1.19,NA,NA,NA,NA,NA,NA,"stop","I2L S41F A105T T140*",4
"lib2","SARS-CoV-2","CCTGAATTTAAAGACT",9,84.82,8.72,-2.11,0.07,1.92,1.09,0,">1 nonsynonymous","A22L I142F T148W",3
"lib2","SARS-CoV-2","CCTGACAAAAGTCCAT",4,74.28,10.83,-0.01,0.06,2.93,1.1,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","CCTGACAAATCCGGTT",2,18.37,7.52,-3.32,0.27,1.5,1.18,0.05,">1 nonsynonymous","T85L K94S",2
"lib2","SARS-CoV-2","CCTGACACTGGTCCCA",1,0.62,NA,NA,NA,NA,NA,NA,"stop","A14S L38S P54L Y91*",4
"lib2","SARS-CoV-2","CCTGACAGGAATTGCC",2,67.43,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16E C31G S113F Y121N D137N",5
"lib2","SARS-CoV-2","CCTGACATAGTATGCT",10,128.9,10.84,0,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGACATCCAAGAAT",1,32.2,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6M I88D",2
"lib2","SARS-CoV-2","CCTGACCAAGGAAAAG",3,69.23,8.13,-2.71,0.11,1.64,1.11,0,">1 nonsynonymous","N40R G116Q Y121R",3
"lib2","SARS-CoV-2","CCTGACCACCAACATC",1,9.17,8.98,-1.86,0.16,2.91,1.15,0.01,">1 nonsynonymous","Y119T G155T",2
"lib2","SARS-CoV-2","CCTGACCCAAGAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F44W G101W Y119*",3
"lib2","SARS-CoV-2","CCTGACCCAGATAGGT",7,42.49,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N1T C6I R27F C102L N151D",5
"lib2","SARS-CoV-2","CCTGACCGTATACTAA",4,165.58,7.59,-3.25,0.12,2.24,1.1,0,">1 nonsynonymous","E141Q Y175D",2
"lib2","SARS-CoV-2","CCTGACCTACTATGAA",11,101.39,8.38,-2.46,0.11,1.5,1.1,0,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","CCTGACCTTACTTCAA",1,30.52,10.25,-0.58,0.07,2.93,1.08,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","CCTGACCTTATACCAG",2,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35T S41C",2
"lib2","SARS-CoV-2","CCTGACGATGGCCAGT",2,1.93,NA,NA,NA,NA,NA,NA,"stop","F8*",1
"lib2","SARS-CoV-2","CCTGACGTACATAAAA",9,33.99,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","L95W I142V P161G",3
"lib2","SARS-CoV-2","CCTGACTAAACGATAT",5,10.41,9.28,-1.55,0.22,1.5,1.12,0.02,"1 nonsynonymous","K94D",1
"lib2","SARS-CoV-2","CCTGACTCTCAGTTAA",3,0.93,NA,NA,NA,NA,NA,NA,"stop","N110* Y143H G174A",3
"lib2","SARS-CoV-2","CCTGACTTCGAAATGC",11,103.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5M S36L V103L E141W",4
"lib2","SARS-CoV-2","CCTGAGACATTTAAAG",10,147.86,10.74,-0.1,0.05,2.9,1.09,0,">1 nonsynonymous","G116T P197K",2
"lib2","SARS-CoV-2","CCTGAGATTAACCCTA",3,60.23,10.28,-0.56,0.03,2.94,1.04,0,">1 nonsynonymous","D59F L95V T148L",3
"lib2","SARS-CoV-2","CCTGAGCAGAGCAAAT",2,2.13,NA,NA,NA,NA,NA,NA,"stop","Y35W F70*",2
"lib2","SARS-CoV-2","CCTGAGGAAACAATAC",17,4.44,NA,NA,NA,NA,NA,NA,"stop","L5* G101V F126M H189* K199T",5
"lib2","SARS-CoV-2","CCTGAGTAAATTTAAG",5,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123S A192S",2
"lib2","SARS-CoV-2","CCTGATAAAGATTAAG",3,51.79,10.58,-0.25,0.06,2.86,1.13,0,"1 nonsynonymous","S184Y",1
"lib2","SARS-CoV-2","CCTGATAAGATCCATT",9,57.34,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2L Q84W Y91W K114N Q144S G155C",6
"lib2","SARS-CoV-2","CCTGATAATCGGTTGT",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M V37L A81V",3
"lib2","SARS-CoV-2","CCTGATAATTAGTTAC",3,54.75,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N1Q D137T S164K Q176D",4
"lib2","SARS-CoV-2","CCTGATACCGATAGCC",7,59.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2V R16F I88R",3
"lib2","SARS-CoV-2","CCTGATATTATGCGAA",1,24.65,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V11N L38S D97V S139D V153F",5
"lib2","SARS-CoV-2","CCTGATCACAATGAAG",9,75.87,8.25,-2.58,0.16,1.8,1.02,0.01,">1 nonsynonymous","A14R K94A Y119I",3
"lib2","SARS-CoV-2","CCTGATCACTCATAAA",3,0.59,NA,NA,NA,NA,NA,NA,"stop","V37* F99Y L162G G172R",4
"lib2","SARS-CoV-2","CCTGATCATACCCTAG",5,66.35,9.98,-0.86,0.09,2.19,1.11,0,"1 nonsynonymous","Q84W",1
"lib2","SARS-CoV-2","CCTGATCCCGAGCTGA",1,8.68,6.12,-4.71,0.91,1.5,1.06,0.04,">1 nonsynonymous","D90R V103Q V115M",3
"lib2","SARS-CoV-2","CCTGATCCGGACAAAT",14,0.75,NA,NA,NA,NA,NA,NA,"stop","Y35M T63N D68* D112L S129K L162W K199D",7
"lib2","SARS-CoV-2","CCTGATCGCTCACAAT",7,33.35,8.47,-2.37,0.41,1.5,1,0.06,">1 nonsynonymous","L57C P96R R127I G172L",4
"lib2","SARS-CoV-2","CCTGATCGGTTAAGAT",1,7.44,10.65,-0.19,0.13,2.8,1.27,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CCTGATCGTACTGAAT",9,124.73,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N40E I80N",2
"lib2","SARS-CoV-2","CCTGATCTCTATCTTG",6,37.15,9.45,-1.38,0.11,2.08,1.06,0.01,">1 nonsynonymous","C6L A81S",2
"lib2","SARS-CoV-2","CCTGATCTCTGCGGCA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","N107W Y121* E135L",3
"lib2","SARS-CoV-2","CCTGATGACCCATCTA",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103F K132S E154L",3
"lib2","SARS-CoV-2","CCTGATGATAAACATA",12,324.72,10.8,-0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGATGTCTAGAGAA",6,89.5,9.9,-0.93,0.09,2.17,1.04,0,">1 nonsynonymous","N4W G9C D97N",3
"lib2","SARS-CoV-2","CCTGATTAGCGGATTA",10,198.93,7.82,-3.02,0.12,2.34,1.09,0.01,"1 nonsynonymous","C158K",1
"lib2","SARS-CoV-2","CCTGATTATAACATAA",15,319.48,10.64,-0.2,0.03,2.93,1.06,0,">1 nonsynonymous","R16L S29R",2
"lib2","SARS-CoV-2","CCTGATTCTACCGCAT",2,68.92,10.82,-0.01,0.05,2.94,1.08,0,"1 nonsynonymous","T46H",1
"lib2","SARS-CoV-2","CCTGATTCTTCACAAT",5,102.39,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L60K T85I V103C",3
"lib2","SARS-CoV-2","CCTGATTGTGTATTAC",3,41.73,9.04,-1.79,0.06,2.6,1.05,0,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","CCTGCAAACGCCTTTA",7,0.95,NA,NA,NA,NA,NA,NA,"stop","D137L G152* T201L",3
"lib2","SARS-CoV-2","CCTGCAAAGCCCAATG",8,97.98,9.6,-1.23,0.07,2.35,1.08,0,">1 nonsynonymous","S29T V37K Y91T",3
"lib2","SARS-CoV-2","CCTGCAAGATAACAGT",1,39.65,10.11,-0.73,0.05,2.84,1,0,"1 nonsynonymous","R136A",1
"lib2","SARS-CoV-2","CCTGCAAGGATTAACT",4,174.13,10.37,-0.47,0.04,2.89,1.03,0,">1 nonsynonymous","N13S T148A",2
"lib2","SARS-CoV-2","CCTGCAAGTCATGCTT",6,260.29,9.58,-1.25,0.04,2.88,1.03,0,">1 nonsynonymous","D90L L125T",2
"lib2","SARS-CoV-2","CCTGCAATACGTATCG",5,77.21,10.02,-0.82,0.09,2.32,1.04,0,">1 nonsynonymous","N4R A14K S36L D98A L131I",5
"lib2","SARS-CoV-2","CCTGCAATACGTATCT",1,1.1,NA,NA,NA,NA,NA,NA,"stop","A33* R136D A145V",3
"lib2","SARS-CoV-2","CCTGCACATTAGTTCC",7,140.56,6,-4.84,1.34,1.5,1.14,0.01,">1 nonsynonymous","A14V V20M Y119T Q176N",4
"lib2","SARS-CoV-2","CCTGCACGCATAGGAG",4,68.12,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N4F R127C R136Q",3
"lib2","SARS-CoV-2","CCTGCAGAAAATTGGC",5,25.34,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","D68V L187F",2
"lib2","SARS-CoV-2","CCTGCAGAACCGATAT",6,34.71,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S45T Y119L V182L A190E",4
"lib2","SARS-CoV-2","CCTGCATCATAACTAA",7,60.65,10.81,-0.03,0.03,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGCATTTACCAGAA",7,13.37,10.65,-0.19,0.05,3,1.02,0,">1 nonsynonymous","G9R R16S K114T",3
"lib2","SARS-CoV-2","CCTGCCAAAAACATTT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","Y66* D112A L188M",3
"lib2","SARS-CoV-2","CCTGCCAAGTTTGCAT",2,11.38,6.35,-4.49,2,3,1.16,0.01,">1 nonsynonymous","D90T V103E",2
"lib2","SARS-CoV-2","CCTGCCAATGGTAAAC",12,168.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T170N Y175L T201S",3
"lib2","SARS-CoV-2","CCTGCCATATATCTAC",3,6.69,7.23,-3.6,0.61,1.5,1,0.04,">1 nonsynonymous","D97Y S113P",2
"lib2","SARS-CoV-2","CCTGCCATTTACAAAC",2,54.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43G I88E P161K Y175T",4
"lib2","SARS-CoV-2","CCTGCCCCATCTTGAA",7,69.24,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F62S D90Y N92F V153H",4
"lib2","SARS-CoV-2","CCTGCCCCTAACTGAG",4,22.29,10.3,-0.54,0.08,2.88,1.1,0,">1 nonsynonymous","C6T V32Q",2
"lib2","SARS-CoV-2","CCTGCCCGCAATACGA",2,24.47,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","P161V V181C",2
"lib2","SARS-CoV-2","CCTGCCGCACTCTCTG",11,232.9,10.55,-0.28,0.04,2.95,1.01,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","CCTGCCGCGAGACTAT",5,0,NA,NA,NA,NA,NA,NA,"stop","Y91S F167P E186*",3
"lib2","SARS-CoV-2","CCTGCCGTGACAAAGG",1,45.31,10.84,0.01,0.06,2.95,1.05,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","CCTGCCGTTGAACGCC",2,21.21,6,-4.84,1.12,1.5,1.09,0.01,">1 nonsynonymous","D98M Y143S G152R",3
"lib2","SARS-CoV-2","CCTGCCTTACTGGGTC",6,28.98,9.56,-1.28,0.14,1.96,1.03,0.01,">1 nonsynonymous","F8G T148L",2
"lib2","SARS-CoV-2","CCTGCGTCCCACATCT",6,73.42,9.93,-0.91,0.04,2.97,1.04,0,">1 nonsynonymous","V37S T85R Y143H G174T",4
"lib2","SARS-CoV-2","CCTGCGTCTCAAACAG",3,34.5,10.76,-0.08,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGCTAAGATGCATT",6,61.49,10.33,-0.5,0.11,2.8,1.05,0.01,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","CCTGCTACGAAATAGA",10,1.76,NA,NA,NA,NA,NA,NA,"stop","P133E V153*",2
"lib2","SARS-CoV-2","CCTGCTGAAACATTTC",13,102.69,9.37,-1.47,0.05,1.95,1.07,0,">1 nonsynonymous","L5I Y91K E141W F160Q",4
"lib2","SARS-CoV-2","CCTGCTGATAAATCCT",4,119.18,10.28,-0.56,0.05,2.9,1.1,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","CCTGCTGGCTTAGCTC",5,17.4,6.68,-4.15,0.2,2.26,1.08,0,">1 nonsynonymous","N1E C150K",2
"lib2","SARS-CoV-2","CCTGCTGGTTTTAAGC",6,45.17,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","S45E D68L F99R Y178I V182D",5
"lib2","SARS-CoV-2","CCTGCTTAAAAACCCA",1,17.78,10.96,0.12,0.07,3,1,0,">1 nonsynonymous","P54R E141Q",2
"lib2","SARS-CoV-2","CCTGCTTACTCGACGC",2,64.85,10.75,-0.09,0.03,2.99,1.04,0,">1 nonsynonymous","S36L A42G",2
"lib2","SARS-CoV-2","CCTGCTTATTCGGTCA",7,92.51,8.72,-2.11,0.08,2.97,1.06,0,">1 nonsynonymous","C61N G83N D90Q Y119I F160S",5
"lib2","SARS-CoV-2","CCTGCTTCCTTTTATC",3,12.5,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","Y121R D137Q V173L",3
"lib2","SARS-CoV-2","CCTGGAAACGAAACGT",7,127.54,10.47,-0.37,0.04,2.89,1.07,0,">1 nonsynonymous","N64L P149V",2
"lib2","SARS-CoV-2","CCTGGAACTCGACTAG",3,21.49,9.63,-1.21,0.08,2.76,1.08,0,">1 nonsynonymous","A42D G83E N118A Q163K",4
"lib2","SARS-CoV-2","CCTGGAATCTAGTCTG",7,47.97,6.66,-4.18,0.31,1.5,1.14,0.01,">1 nonsynonymous","F8P Y35H N107A",3
"lib2","SARS-CoV-2","CCTGGACAATTCATTA",7,24.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6D L60F D68G Y119H Q168A",5
"lib2","SARS-CoV-2","CCTGGACTGTCAGATT",1,0.64,NA,NA,NA,NA,NA,NA,"stop","A42* I104T",2
"lib2","SARS-CoV-2","CCTGGACTTGGAAGAG",6,1.32,NA,NA,NA,NA,NA,NA,"stop","V11L V37* C49Q V180*",4
"lib2","SARS-CoV-2","CCTGGAGAATCTTAAT",4,6.84,6,-4.84,2,1.5,1.18,0.08,">1 nonsynonymous","T15G S41Y A67I R124T P133S",5
"lib2","SARS-CoV-2","CCTGGATATTAAACGC",4,24.04,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","N1S F12G P96S P149V N171L",5
"lib2","SARS-CoV-2","CCTGGATATTTTCGTG",2,62.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E V32P C102S S139Y T170V",5
"lib2","SARS-CoV-2","CCTGGATGTACATATT",1,34.83,10.89,0.05,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGGCAACCGACCTA",4,63.18,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5Q Y35F Y121Q C158L",4
"lib2","SARS-CoV-2","CCTGGCAATATTAGTA",6,46.74,9.44,-1.4,0.11,1.87,1.1,0,">1 nonsynonymous","Y39K L57H I104G T201E",4
"lib2","SARS-CoV-2","CCTGGCACACTGCTCA",5,14.62,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S45P A89M",2
"lib2","SARS-CoV-2","CCTGGCCCCGGGGGTC",6,88.3,10.81,-0.02,0.09,2.74,1.12,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","CCTGGCTCCCTTGAAA",8,39.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12S P54S F99M D112H G172W",5
"lib2","SARS-CoV-2","CCTGGCTTGACTACCG",6,28.42,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D34P G117S G152R Y165V",4
"lib2","SARS-CoV-2","CCTGGGAAATAGATAC",15,44.34,9,-1.84,0.35,1.5,1,0.06,">1 nonsynonymous","S41K I80T",2
"lib2","SARS-CoV-2","CCTGGGCGAAAAGCGG",3,124.3,9.97,-0.87,0.06,2.8,1.03,0,">1 nonsynonymous","T55Q K132A G155F",3
"lib2","SARS-CoV-2","CCTGGGCTAAAAAAAT",6,22.96,9.11,-1.73,0.39,1.5,1.2,0.06,">1 nonsynonymous","I88M P149C",2
"lib2","SARS-CoV-2","CCTGGGCTTATACATT",3,21.58,10.21,-0.63,0.05,2.95,1,0,">1 nonsynonymous","D59S G83S F156V T201P",4
"lib2","SARS-CoV-2","CCTGGGGCAAGATGAT",6,47.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39A V65L A89I Y119S Y178T",5
"lib2","SARS-CoV-2","CCTGGGGCAAGCCACA",2,0.36,NA,NA,NA,NA,NA,NA,"stop","Y39* P149H P197R",3
"lib2","SARS-CoV-2","CCTGGGTAATTAAGCC",6,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104D P177A",2
"lib2","SARS-CoV-2","CCTGGGTACTAGGGTC",2,21.57,9.89,-0.94,0.2,2.34,1.06,0.01,"1 nonsynonymous","S69H",1
"lib2","SARS-CoV-2","CCTGGGTGAAGCCAAC",7,16.44,7.13,-3.7,0.5,1.5,1.23,0.04,">1 nonsynonymous","V20R D97C",2
"lib2","SARS-CoV-2","CCTGGTAAACAATTCG",16,96.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25N V37L D68R",3
"lib2","SARS-CoV-2","CCTGGTAACGGCGTTG",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C Y121V S200T",3
"lib2","SARS-CoV-2","CCTGGTACAGTCTCAG",2,79.77,10.77,-0.07,0.06,2.95,1.07,0,"1 nonsynonymous","I2Y",1
"lib2","SARS-CoV-2","CCTGGTATCCAGGGTC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","CCTGGTATGGTACCCC",2,36.69,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G83K P96T F126S",3
"lib2","SARS-CoV-2","CCTGGTCTAGGGGCGA",2,22.3,8.38,-2.45,0.16,1.96,1,0.01,">1 nonsynonymous","G9F V37S F167L",3
"lib2","SARS-CoV-2","CCTGGTCTATGGCCTT",2,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M K26N R27L G83E S113R R127A P149L E154V G155V",9
"lib2","SARS-CoV-2","CCTGGTGCAAATCCAT",4,19.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60W P96C F167C",3
"lib2","SARS-CoV-2","CCTGGTTTACCGTCTA",14,3.71,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib2","SARS-CoV-2","CCTGTAAGAAGTATAA",9,54.4,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10L N64L W106F G155Y",4
"lib2","SARS-CoV-2","CCTGTAATACGCGGTC",5,16.89,6,-4.84,2,3,1.07,0,">1 nonsynonymous","I88G A105S C158L V180L",4
"lib2","SARS-CoV-2","CCTGTACAGTTCCCTG",1,25.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P177R T201R",2
"lib2","SARS-CoV-2","CCTGTCAATACCACTA",2,25.07,9.36,-1.48,0.06,2.97,1.09,0,">1 nonsynonymous","I2Y Y35F Y119A P149T",4
"lib2","SARS-CoV-2","CCTGTCAATGTTGGCA",3,35.32,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R16L C61R D68S G117A",4
"lib2","SARS-CoV-2","CCTGTCATTGTATAAG",6,104.35,10.8,-0.03,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGTCCAGAAATGTA",5,87.75,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","D98Y Y119H P177W",3
"lib2","SARS-CoV-2","CCTGTCCCATCTCGGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","CCTGTCCTCACAATTC",8,56.56,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","CCTGTCCTGAACTTGT",7,40.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C49M T55N R73F E135D P161R",5
"lib2","SARS-CoV-2","CCTGTCGACTGGTCCA",1,122.08,10.25,-0.59,0.07,2.68,1.02,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","CCTGTCGGAACTAGAG",10,1.37,NA,NA,NA,NA,NA,NA,"stop","F12A S113T F156*",3
"lib2","SARS-CoV-2","CCTGTCGGATGCCATG",1,125.57,6.1,-4.73,0.76,1.5,1.13,0.02,">1 nonsynonymous","E10R D68T F134L Q176R",4
"lib2","SARS-CoV-2","CCTGTCTATATTCAGC",7,29.7,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","A42D L95R A145T G172H",4
"lib2","SARS-CoV-2","CCTGTCTCAAAAGTCC",3,84.45,9.02,-1.82,0.06,2.78,1.1,0,">1 nonsynonymous","E10N V37I K87V V173P",4
"lib2","SARS-CoV-2","CCTGTGAACCCCGAAT",1,53.12,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y39M N130S P177Q T201L",4
"lib2","SARS-CoV-2","CCTGTGCTAGAATGGG",4,71.82,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N4L I28P Y35R I104S P133Q",5
"lib2","SARS-CoV-2","CCTGTGTAAAATACCC",9,105.59,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35T G83I N120D Y123G A192N",5
"lib2","SARS-CoV-2","CCTGTTAATTGACTCC",2,8.96,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","E10G F62R V153L C158T Y165M",5
"lib2","SARS-CoV-2","CCTGTTAATTTAATAT",5,9.31,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14I K94V",2
"lib2","SARS-CoV-2","CCTGTTACCGCGTTTA",9,52.01,8.29,-2.54,0.13,1.5,1.14,0.01,">1 nonsynonymous","F12L A14G D112L",3
"lib2","SARS-CoV-2","CCTGTTAGTTGTTTAT",1,16.68,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","P96M R127K I142V",3
"lib2","SARS-CoV-2","CCTGTTATGAATATAA",9,59.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36E K56G S69E A81I P96L Y119D C150S",7
"lib2","SARS-CoV-2","CCTGTTATGATAAATA",9,102.4,10.8,-0.04,0.04,2.82,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTGTTCGATATACTC",4,0.55,NA,NA,NA,NA,NA,NA,"stop","F62* T201F",2
"lib2","SARS-CoV-2","CCTGTTCTCAATCTCA",8,179.26,10.26,-0.58,0.04,2.78,1.07,0,">1 nonsynonymous","N4I G152T",2
"lib2","SARS-CoV-2","CCTGTTGAACATTAGC",7,62.77,6,-4.84,0.65,3,1.11,0,">1 nonsynonymous","G86T S139Y",2
"lib2","SARS-CoV-2","CCTGTTTAAAGCGAAA",4,80.12,10.82,-0.02,0.05,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTGTTTCTACGCACA",5,49.07,8.53,-2.3,0.32,1.5,1,0.05,">1 nonsynonymous","R16Y Q84M W106A E135T E154T",5
"lib2","SARS-CoV-2","CCTGTTTTACTCTGGG",15,216.55,10.15,-0.68,0.05,2.73,1.02,0,">1 nonsynonymous","A42C N64Q D90L",3
"lib2","SARS-CoV-2","CCTTAAAAAACTAACA",3,1.45,NA,NA,NA,NA,NA,NA,"stop","K48M T85* F156I K198V",4
"lib2","SARS-CoV-2","CCTTAAAAAACTAGCG",2,56.12,8.65,-2.18,0.06,2.84,1.07,0,"1 nonsynonymous","Y143C",1
"lib2","SARS-CoV-2","CCTTAAAATACACAGA",6,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R P54T",2
"lib2","SARS-CoV-2","CCTTAAAATATACGAC",5,1.44,NA,NA,NA,NA,NA,NA,"stop","K56S A81T N130*",3
"lib2","SARS-CoV-2","CCTTAAAGCACAACAA",8,253.5,10.86,0.02,0.04,2.9,1.09,0,"1 nonsynonymous","N151G",1
"lib2","SARS-CoV-2","CCTTAAATGATGATAG",18,255.1,10.84,0,0.03,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTAAATTACGCTAG",11,39.24,8.33,-2.5,0.26,1.5,1,0.03,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","CCTTAACAAACCGAGT",4,44.34,10.84,0,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTAACAAGAGAAAG",6,9.63,NA,NA,NA,NA,NA,NA,"stop","L5* N92V",2
"lib2","SARS-CoV-2","CCTTAACAATCTGCAT",5,0,NA,NA,NA,NA,NA,NA,"stop","T15L S36V L122G Q144* T201Y",5
"lib2","SARS-CoV-2","CCTTAACATAAAGCCA",2,1127.5,10.71,-0.13,0.02,2.96,1.04,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","CCTTAACCTATCACTA",3,33.19,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12D K56T S164R F185S",4
"lib2","SARS-CoV-2","CCTTAACGGATGCTCA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y Y121S S129D",3
"lib2","SARS-CoV-2","CCTTAACTACAACAGG",10,91.37,9.38,-1.46,0.05,2.26,1.04,0,">1 nonsynonymous","C6I I142V P149F",3
"lib2","SARS-CoV-2","CCTTAACTAGATTTAT",10,112.5,10.75,-0.09,0.06,2.86,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTAACTCTGTCTGA",12,109.52,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","I80D D112K Y119T",3
"lib2","SARS-CoV-2","CCTTAACTTATCTTTG",2,46.16,9.62,-1.22,0.06,2.93,1.06,0,">1 nonsynonymous","F44Y P169G",2
"lib2","SARS-CoV-2","CCTTAAGAAAAGAAAA",11,61.52,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N30L T46L K56S N92Q S139H",5
"lib2","SARS-CoV-2","CCTTAAGAACTGACGC",2,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127D H189T",2
"lib2","SARS-CoV-2","CCTTAAGACCTAAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","K87F L95I A105W G117N Q163*",5
"lib2","SARS-CoV-2","CCTTAAGACTATCTTG",1,6.59,9.02,-1.82,0.09,2.87,1,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","CCTTAAGATAATTTAC",3,70.16,8.36,-2.48,0.15,2.02,1.11,0.01,">1 nonsynonymous","T100L Y121G",2
"lib2","SARS-CoV-2","CCTTAAGATTTCAATC",4,65.11,10.01,-0.83,0.06,2.63,1.08,0,">1 nonsynonymous","N64V G83Y S129L N151S",4
"lib2","SARS-CoV-2","CCTTAAGCAATGTAGA",4,11.12,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15A Y35Q K94E R136V T201K",5
"lib2","SARS-CoV-2","CCTTAAGGGATATCCT",10,79.64,7.38,-3.46,0.2,1.5,1.06,0.01,">1 nonsynonymous","S29H F62N Y165L",3
"lib2","SARS-CoV-2","CCTTAAGTATACATTC",1,13.38,6,-4.84,2,2.04,1.02,0.01,">1 nonsynonymous","W23N S53R V77R L95Y Y121N D137F G146L",7
"lib2","SARS-CoV-2","CCTTAATATAAAATTA",5,47.13,7.84,-3,0.19,1.94,1.04,0.01,">1 nonsynonymous","P7S N64T Y143R",3
"lib2","SARS-CoV-2","CCTTAATATATATATA",5,121.67,10.69,-0.15,0.06,2.88,1.07,0,"1 nonsynonymous","A190V",1
"lib2","SARS-CoV-2","CCTTAATCGTGAAGCG",12,82.04,8.85,-1.99,0.14,1.5,1.04,0.01,">1 nonsynonymous","F62S F99V L122E",3
"lib2","SARS-CoV-2","CCTTAATCTAACCAAC",4,51.39,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F8M Y35W K56S F70D",4
"lib2","SARS-CoV-2","CCTTAATTCTTGCAAG",10,200.84,9.25,-1.59,0.05,2.93,1.09,0,">1 nonsynonymous","A42R G117S Q168R",3
"lib2","SARS-CoV-2","CCTTAATTGTAGAAAT",13,148.25,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T55L N92Y W106L L122S G155K",5
"lib2","SARS-CoV-2","CCTTAATTTAATAAAA",11,2.8,NA,NA,NA,NA,NA,NA,"stop","N13Q D68* V77A G174E",4
"lib2","SARS-CoV-2","CCTTAATTTCAATCTA",7,84.56,10.25,-0.59,0.08,2.78,1.09,0,">1 nonsynonymous","N13S T63V",2
"lib2","SARS-CoV-2","CCTTACAAGACGCCCC",3,30.1,8.22,-2.61,0.21,1.5,1.01,0.02,">1 nonsynonymous","F44A L95T",2
"lib2","SARS-CoV-2","CCTTACATGAAGTCTT",2,9.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86R S129P P161V",3
"lib2","SARS-CoV-2","CCTTACATTCGTTCAC",5,107.53,9.1,-1.74,0.12,2.44,1.09,0.01,">1 nonsynonymous","D90R Q144C",2
"lib2","SARS-CoV-2","CCTTACCTACCCAAAT",4,0.29,NA,NA,NA,NA,NA,NA,"stop","L5* L57C T100L N171H",4
"lib2","SARS-CoV-2","CCTTACCTCTCCTGCC",11,98.92,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","V37L G83D Y123P E154F",4
"lib2","SARS-CoV-2","CCTTACGCAATTGTAA",7,56.35,10.27,-0.56,0.05,2.88,1.08,0,">1 nonsynonymous","K48S T63C",2
"lib2","SARS-CoV-2","CCTTACGCATCTTTAA",2,28.93,10.39,-0.44,0.07,2.85,1.16,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","CCTTACGCTTACATAA",5,0.85,NA,NA,NA,NA,NA,NA,"stop","F99L A105K G117V K132T T148* C195I",6
"lib2","SARS-CoV-2","CCTTACGGTACCCACC",4,35.04,6.4,-4.44,0.42,1.88,1.16,0.01,">1 nonsynonymous","N92S L131T",2
"lib2","SARS-CoV-2","CCTTACTAGATTTGAA",20,241.74,10.7,-0.14,0.04,2.9,1.08,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","CCTTACTCCGATGTAT",1,41.24,10.21,-0.63,0.08,2.69,1.03,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","CCTTACTCTGCAACAA",2,35.15,10.79,-0.04,0.05,3,1.03,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","CCTTACTTTCAAAACT",1,24.45,6,-4.84,1.43,2.03,1.12,0.01,">1 nonsynonymous","F17P W23E",2
"lib2","SARS-CoV-2","CCTTAGAAAGATCTAG",20,14.57,NA,NA,NA,NA,NA,NA,"stop","G9W N13A S36I T55F S113K S139V G146* V181G",8
"lib2","SARS-CoV-2","CCTTAGAACAAGCGTA",12,3.56,NA,NA,NA,NA,NA,NA,"stop","N107* K128C S139T L183P",4
"lib2","SARS-CoV-2","CCTTAGAGACTGGGAT",2,14.65,10.66,-0.18,0.21,2.64,1.09,0.01,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","CCTTAGATGTCAATTA",2,35.33,10.81,-0.03,0.09,2.73,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTAGCAAACTTACC",3,33.16,10.68,-0.15,0.12,2.71,1.24,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CCTTAGCAAATGTTGG",9,154.36,10.56,-0.27,0.05,2.86,1.08,0,">1 nonsynonymous","N1G S41I T85S N120R",4
"lib2","SARS-CoV-2","CCTTAGCCAGTAGAAA",5,49.89,10.87,0.03,0.08,2.88,1.08,0,"1 nonsynonymous","P54V",1
"lib2","SARS-CoV-2","CCTTAGCCCCTAATGA",1,7.05,7,-3.83,0.38,1.5,1.02,0.03,">1 nonsynonymous","S43H A105P S200Y",3
"lib2","SARS-CoV-2","CCTTAGCGATTAGTAA",1,26.09,10.89,0.06,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTAGGAAACTCACG",3,10.16,9.6,-1.23,0.29,2.1,1.1,0.02,">1 nonsynonymous","S45L T46K I142F",3
"lib2","SARS-CoV-2","CCTTAGGACCTATGAT",7,127.12,9.5,-1.34,0.07,2.51,1.06,0,">1 nonsynonymous","I72T K87G L122T Q168F T201Y",5
"lib2","SARS-CoV-2","CCTTAGGGCTAGGCGG",12,25.97,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6M F17S W23K T55I I88C K114I L131D",7
"lib2","SARS-CoV-2","CCTTAGTATACTCTCA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","P149* G174L",2
"lib2","SARS-CoV-2","CCTTAGTCGGCTAGTG",4,76.53,10.75,-0.09,0.1,2.78,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTTAGTCTATAGACA",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59N P96H G152T",3
"lib2","SARS-CoV-2","CCTTAGTGTCCACCAA",3,19.13,10.67,-0.16,0.04,3,1.01,0,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","CCTTATAAAACACCCT",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90T N107W P161T",3
"lib2","SARS-CoV-2","CCTTATAAGCAGGACG",4,46.98,10.28,-0.55,0.05,2.76,1.04,0,">1 nonsynonymous","T100S H189W",2
"lib2","SARS-CoV-2","CCTTATAAGGACCATC",12,9.45,NA,NA,NA,NA,NA,NA,"stop","D98* K132S T170F L183I",4
"lib2","SARS-CoV-2","CCTTATAATCGCCAAT",13,6.37,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13G N64V V103M Y123N Y143L",5
"lib2","SARS-CoV-2","CCTTATACGGATGCAA",1,6.66,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","A33S F44N D98V K114Q L122M C158L Q176P",7
"lib2","SARS-CoV-2","CCTTATAGTTGAGGTT",4,40.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K48L C49F N120H P149S C158T",5
"lib2","SARS-CoV-2","CCTTATATTAACAGAT",1,11.72,6,-4.84,1.31,3,1.06,0.01,">1 nonsynonymous","F99P V115S A192N",3
"lib2","SARS-CoV-2","CCTTATATTTAACGCA",4,48.04,10.7,-0.14,0.03,2.98,1.01,0,">1 nonsynonymous","A105M N171F K198N",3
"lib2","SARS-CoV-2","CCTTATCACAAAAAGG",11,48.65,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","S41E G83D Y93D",3
"lib2","SARS-CoV-2","CCTTATCATCAGTAAA",4,0.47,NA,NA,NA,NA,NA,NA,"stop","E10* V37L D98G A105R Q176R",5
"lib2","SARS-CoV-2","CCTTATCTTGAAGGCT",4,0.31,NA,NA,NA,NA,NA,NA,"stop","S43* S113V V180S",3
"lib2","SARS-CoV-2","CCTTATCTTGGTATGC",3,57.35,10.49,-0.35,0.07,2.85,1.11,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","CCTTATGAAATTGCAG",9,145.44,10.67,-0.16,0.02,2.95,1.04,0,">1 nonsynonymous","S41V P149D",2
"lib2","SARS-CoV-2","CCTTATGCATGACGAT",15,3.84,NA,NA,NA,NA,NA,NA,"stop","N30G F99* Y121T G155C Q176H",5
"lib2","SARS-CoV-2","CCTTATGGCCATTAGG",11,177.16,8.27,-2.57,0.07,2.08,1.06,0,">1 nonsynonymous","C61P D75Y Y159L",3
"lib2","SARS-CoV-2","CCTTATGTACCGTATC",8,101.67,6,-4.84,0.97,1.5,1.27,0.01,">1 nonsynonymous","L38S L57H N130E",3
"lib2","SARS-CoV-2","CCTTATGTTACTACAA",9,94.6,10.83,-0.01,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTATTAAATCTTAT",10,6.69,NA,NA,NA,NA,NA,NA,"stop","T3M N13* S45W A89M N107F P133T Y175L",7
"lib2","SARS-CoV-2","CCTTATTAGAACTGCA",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R A18G G86K L131R",4
"lib2","SARS-CoV-2","CCTTATTCTCTCACAC",8,45.75,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","G51K V103W P133H Y175D G196T",5
"lib2","SARS-CoV-2","CCTTATTTCTAATTAA",4,23.25,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","L38S C49L T85S L131M C158N",5
"lib2","SARS-CoV-2","CCTTATTTTACCAGAC",3,1.11,NA,NA,NA,NA,NA,NA,"stop","T15D A22* L125F",3
"lib2","SARS-CoV-2","CCTTATTTTGACACAT",3,90.56,8.7,-2.14,0.09,2.6,1.1,0,">1 nonsynonymous","Y35R Y119F",2
"lib2","SARS-CoV-2","CCTTCAAACTAATAGC",6,82.58,10.88,0.05,0.04,2.89,1.12,0,">1 nonsynonymous","Y35L V173M",2
"lib2","SARS-CoV-2","CCTTCAAAGGCAAAGT",5,33.46,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F17R S36A K128G I138R P149C",5
"lib2","SARS-CoV-2","CCTTCAAATGACAGTT",12,151.53,6,-4.84,1.75,1.5,1.14,0.01,">1 nonsynonymous","S36M F44E D68P G83Y T140M G155S",6
"lib2","SARS-CoV-2","CCTTCAACAAGAGTAA",1,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W F44R L95D A105G N110A",5
"lib2","SARS-CoV-2","CCTTCAACCCTCACAT",19,11.19,NA,NA,NA,NA,NA,NA,"stop","P54F L60I W106*",3
"lib2","SARS-CoV-2","CCTTCACAGTCTACAA",2,8.41,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","S45G A105F E141V G155I",4
"lib2","SARS-CoV-2","CCTTCACTGACTATGA",5,74.9,9.92,-0.92,0.09,2.33,1.03,0,">1 nonsynonymous","Y35G Q84M Q144E N151V",4
"lib2","SARS-CoV-2","CCTTCATCTCGGCGGT",6,54.26,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20W G83V I88C Y119T I142V L188Q",6
"lib2","SARS-CoV-2","CCTTCATTGAAGATAA",15,1.59,NA,NA,NA,NA,NA,NA,"stop","A33S T63* G166A K198T",4
"lib2","SARS-CoV-2","CCTTCCAAAACTAAAC",4,27.18,9.74,-1.1,0.05,3,1.03,0,">1 nonsynonymous","Y35R F156P",2
"lib2","SARS-CoV-2","CCTTCCAAACCGGTAC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M F167L",2
"lib2","SARS-CoV-2","CCTTCCAAAGGCAGAT",27,290.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V L131H",2
"lib2","SARS-CoV-2","CCTTCCACGTAAGAAA",7,15.28,10.56,-0.27,0.04,3,1.02,0,">1 nonsynonymous","C61F N120D K198V",3
"lib2","SARS-CoV-2","CCTTCCACGTAGCAAA",14,5.51,NA,NA,NA,NA,NA,NA,"stop","F99A A105I D112E F156P Q176*",5
"lib2","SARS-CoV-2","CCTTCCAGTTCATTTA",5,58.32,9.16,-1.67,0.09,1.83,1.11,0,">1 nonsynonymous","C6L Y35D K132D N171F",4
"lib2","SARS-CoV-2","CCTTCCATCGTCAGAT",15,273.64,10.71,-0.12,0.04,2.87,1.09,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","CCTTCCATCTGTAGTA",3,41.15,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S19L L95S",2
"lib2","SARS-CoV-2","CCTTCCCAGGGGAGTA",9,35.71,7.64,-3.19,0.21,1.69,1.08,0.02,">1 nonsynonymous","R16S K94C N157M",3
"lib2","SARS-CoV-2","CCTTCCCAGGTACACT",11,37.12,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","C102S P149L",2
"lib2","SARS-CoV-2","CCTTCCCGAAAGATTA",4,35.18,7.34,-3.5,0.24,1.5,1.12,0.02,">1 nonsynonymous","V32R S41W G146L",3
"lib2","SARS-CoV-2","CCTTCCCTGACTCGCC",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68Q A105T",2
"lib2","SARS-CoV-2","CCTTCCCTGCGATGTT",9,77.35,8.37,-2.47,0.13,1.99,1.07,0.01,">1 nonsynonymous","T100L N107L",2
"lib2","SARS-CoV-2","CCTTCCGAAAATCCTG",6,129.65,10.81,-0.02,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTCCGAAAGTCTCA",1,19.59,9.37,-1.47,0.31,2.03,1,0.05,">1 nonsynonymous","N1K F167L",2
"lib2","SARS-CoV-2","CCTTCCGAATTAGTAG",1,29.25,6.31,-4.52,0.37,1.5,1.08,0.01,">1 nonsynonymous","L162P Y175G S184F T201S",4
"lib2","SARS-CoV-2","CCTTCCGGGAACATCG",14,292.63,10.44,-0.39,0.03,2.93,1.05,0,">1 nonsynonymous","S45D C61N Q84N",3
"lib2","SARS-CoV-2","CCTTCCGGTTCCCCGC",1,43.06,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","P82M G166L",2
"lib2","SARS-CoV-2","CCTTCCTACTGAACGG",7,71.54,10.57,-0.27,0.04,2.96,1.02,0,">1 nonsynonymous","T3I S41M",2
"lib2","SARS-CoV-2","CCTTCCTCCGTATAGT",2,97.25,10.23,-0.6,0.04,2.84,1.03,0,">1 nonsynonymous","S69W K198R",2
"lib2","SARS-CoV-2","CCTTCGAAGGACATCA",2,6.65,10.82,-0.02,0.25,2.6,1,0.02,">1 nonsynonymous","T46Y D97R",2
"lib2","SARS-CoV-2","CCTTCGAATAGTTCGG",31,103.46,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","T63P G101N",2
"lib2","SARS-CoV-2","CCTTCGAATTGTGCCA",4,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T S69N T148W",3
"lib2","SARS-CoV-2","CCTTCGACGATTACGC",3,4.96,NA,NA,NA,NA,NA,NA,"stop","L5* V32E T63L A89R G117L V173P",6
"lib2","SARS-CoV-2","CCTTCGACTAAGCCGC",6,37.79,10.3,-0.54,0.06,2.82,1.03,0,">1 nonsynonymous","N13F S41R",2
"lib2","SARS-CoV-2","CCTTCGCCAATTAACG",9,100.6,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12S G86V P149Q",3
"lib2","SARS-CoV-2","CCTTCGCCATGGTCCA",3,23.87,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","Y93V N107K",2
"lib2","SARS-CoV-2","CCTTCGCGAGTAACAG",6,0,NA,NA,NA,NA,NA,NA,"stop","G9E C49* Y119P E154W",4
"lib2","SARS-CoV-2","CCTTCGCTGCGGTATT",8,141.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y39A D112K",2
"lib2","SARS-CoV-2","CCTTCGGACTATACGC",3,23.9,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C31N T55S K94T T201V",4
"lib2","SARS-CoV-2","CCTTCGGAGCTTTATG",3,94.44,9.96,-0.88,0.04,2.94,1.05,0,">1 nonsynonymous","G155D P191F",2
"lib2","SARS-CoV-2","CCTTCGGTAACAGCAA",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L N107L E141K",3
"lib2","SARS-CoV-2","CCTTCGTAAGTCAGTT",4,26.84,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A14G S69L A89M S129L Y178F",5
"lib2","SARS-CoV-2","CCTTCGTACCATCCTG",5,180.95,10.65,-0.19,0.03,2.92,1.06,0,"1 nonsynonymous","F44H",1
"lib2","SARS-CoV-2","CCTTCGTCATCATTTT",3,7.47,9.24,-1.6,0.19,1.96,1.06,0.02,">1 nonsynonymous","N40E P82T Q168F",3
"lib2","SARS-CoV-2","CCTTCTAAAAATACTA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","A14C T15N C61* V103P E186S",5
"lib2","SARS-CoV-2","CCTTCTAAACCGGGCA",4,52.38,6.97,-3.87,0.1,2.77,1.14,0,"1 nonsynonymous","C158E",1
"lib2","SARS-CoV-2","CCTTCTAACATAGCCT",17,123.18,6,-4.84,2,3,1.2,0,">1 nonsynonymous","L5Y F12H S41H Y93V G101D P161F",6
"lib2","SARS-CoV-2","CCTTCTACGCGGTAAA",2,14.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12Q F99K",2
"lib2","SARS-CoV-2","CCTTCTATAAAGGGTG",8,91.02,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N24P D59L F99V N107V Y159Q N171D",6
"lib2","SARS-CoV-2","CCTTCTCAGATGCGAC",8,139.54,10.83,0,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTCTCAGTCCAAAT",2,76.48,9.97,-0.86,0.1,2.41,1.04,0,">1 nonsynonymous","V11I A81Y",2
"lib2","SARS-CoV-2","CCTTCTCCCGATTGAA",5,13.69,6,-4.84,1.84,3,1.25,0.07,">1 nonsynonymous","A42T F99G R124W P149Q N151S",5
"lib2","SARS-CoV-2","CCTTCTCCTTTCCCTG",4,10.97,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C61I L95A F99D S129M",4
"lib2","SARS-CoV-2","CCTTCTCGTTCGAATT",17,266.03,9.88,-0.96,0.07,2.45,1.07,0,">1 nonsynonymous","I2G L38A",2
"lib2","SARS-CoV-2","CCTTCTGATTCTATAT",2,85.84,10.58,-0.25,0.05,2.9,1.11,0,">1 nonsynonymous","L95I G196C",2
"lib2","SARS-CoV-2","CCTTCTGCATGCGAAA",4,20.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A K94F N107P",3
"lib2","SARS-CoV-2","CCTTCTTAACAATGAA",3,13.76,10.31,-0.53,0.11,2.84,1.03,0,">1 nonsynonymous","K94A C195K",2
"lib2","SARS-CoV-2","CCTTCTTCATGGCACT",7,59.8,8.64,-2.2,0.11,1.61,1.06,0.01,">1 nonsynonymous","K94E S147P",2
"lib2","SARS-CoV-2","CCTTCTTTGAGATGTC",7,86.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44N L57R Y91H E141W G166M",5
"lib2","SARS-CoV-2","CCTTGAAAATGATCAA",17,144.98,6,-4.84,2,1.5,1.14,0,"1 nonsynonymous","R124I",1
"lib2","SARS-CoV-2","CCTTGAAAGCTGAATC",2,16.6,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G155L F167L",2
"lib2","SARS-CoV-2","CCTTGAAATATAATTA",3,88.27,10.39,-0.45,0.05,2.98,1.06,0,"1 nonsynonymous","T170Q",1
"lib2","SARS-CoV-2","CCTTGAAATGTGTGTG",2,56.41,9.9,-0.93,0.08,2.48,1.05,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","CCTTGAACATGTAACA",8,96.2,10.07,-0.77,0.08,2.46,1.07,0,">1 nonsynonymous","D90L S164L Y178H",3
"lib2","SARS-CoV-2","CCTTGAACCGAGGATA",2,13.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23S G51S V115E",3
"lib2","SARS-CoV-2","CCTTGAAGAGTATAGA",3,20.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20L N58L G101L Y119T Q144N",5
"lib2","SARS-CoV-2","CCTTGAAGCAACGGGA",5,11.6,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","C61S V103F",2
"lib2","SARS-CoV-2","CCTTGAAGCTATATCA",2,19.17,9.46,-1.37,0.09,2.11,1,0,">1 nonsynonymous","S19D T46N D97V T140N V153K",5
"lib2","SARS-CoV-2","CCTTGACAGTAAGCCC",16,344.67,9.35,-1.49,0.07,2.72,1.04,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","CCTTGACCATGTCGGA",11,31.54,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I80K T148M G152R F156Y",4
"lib2","SARS-CoV-2","CCTTGACGCAATTTTA",2,59.48,10.78,-0.06,0.05,2.97,1.04,0,"1 nonsynonymous","D59A",1
"lib2","SARS-CoV-2","CCTTGACGTGTCGAAA",15,137.23,6.8,-4.04,0.11,2.06,1.12,0,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","CCTTGACTGTGACTCT",15,277.11,10.45,-0.38,0.04,2.91,1.07,0,">1 nonsynonymous","T15D S36D K132D",3
"lib2","SARS-CoV-2","CCTTGACTTCAGATTG",9,60.55,10.73,-0.11,0.06,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTGAGAGAGGTAAC",5,205.72,10.02,-0.82,0.03,2.89,1.1,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","CCTTGAGCGAAGTATG",1,51.46,10.81,-0.02,0.06,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTGAGGCATGTCTG",3,32.98,9.71,-1.12,0.19,1.6,1.09,0.02,">1 nonsynonymous","C49Y Q144N",2
"lib2","SARS-CoV-2","CCTTGAGGGATGGACC",6,2.12,NA,NA,NA,NA,NA,NA,"stop","L38I N64S K114*",3
"lib2","SARS-CoV-2","CCTTGAGTAGCAGTAA",3,5.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33F C49V K87Q F167Y S200R",5
"lib2","SARS-CoV-2","CCTTGAGTTCTGTGCG",2,13.65,10.89,0.05,0.13,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTGATCACACAATG",2,61.2,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K128I P169S L183Y",3
"lib2","SARS-CoV-2","CCTTGATTTTCCTTTT",1,51.77,10.89,0.05,0.06,2.99,1.02,0,"1 nonsynonymous","S139D",1
"lib2","SARS-CoV-2","CCTTGCATATGGAATA",2,6.19,6,-4.84,2,1.5,1.11,0.05,"1 nonsynonymous","V103W",1
"lib2","SARS-CoV-2","CCTTGCATGCGAGGAC",2,0.49,NA,NA,NA,NA,NA,NA,"stop","F62* W106R C150Y K198G",4
"lib2","SARS-CoV-2","CCTTGCCACCCGGTCC",2,1.83,NA,NA,NA,NA,NA,NA,"stop","S45D T55C A105P V115* K128V G146F",6
"lib2","SARS-CoV-2","CCTTGCCCCGTCTATA",3,27.18,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L5P L38F V103T Y165E",4
"lib2","SARS-CoV-2","CCTTGCCGTGGTAAAG",11,124.04,8.11,-2.72,0.17,1.78,1.09,0.01,">1 nonsynonymous","A18I K87L N151Y E154D",4
"lib2","SARS-CoV-2","CCTTGCGAGCTCCGAC",2,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N K56F Y119C G174M",4
"lib2","SARS-CoV-2","CCTTGCGGGGACAATT",4,74.21,8.8,-2.04,0.08,2.58,1.15,0,">1 nonsynonymous","D90S N109S",2
"lib2","SARS-CoV-2","CCTTGCTAAGACTATT",5,80.38,6,-4.84,1.57,1.5,1.12,0,">1 nonsynonymous","C158P P169S",2
"lib2","SARS-CoV-2","CCTTGCTATACTTCAC",4,29.78,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","A89T N118C R136L C158M",4
"lib2","SARS-CoV-2","CCTTGCTCTCCCGACA",5,8.83,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y50C L162R Q168P",3
"lib2","SARS-CoV-2","CCTTGGAATGGATTTA",6,69.29,9.34,-1.5,0.08,2.43,1.06,0,">1 nonsynonymous","N13M E141R F156V",3
"lib2","SARS-CoV-2","CCTTGGTATGCAGAAT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","W106Y I142*",2
"lib2","SARS-CoV-2","CCTTGTAAAAAAATTA",3,39.11,8.83,-2.01,0.13,2.18,1.1,0.01,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","CCTTGTATAAAGAATC",2,75.3,10.41,-0.43,0.03,2.88,1.08,0,">1 nonsynonymous","I2M C61L D90K",3
"lib2","SARS-CoV-2","CCTTGTCATGCCGTTA",1,23.08,8.23,-2.61,0.19,1.5,1.02,0.01,">1 nonsynonymous","L5E G83V P133W",3
"lib2","SARS-CoV-2","CCTTGTCCTAGAGAAA",10,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I V153G P161T A192S",4
"lib2","SARS-CoV-2","CCTTGTTATAAGTAAA",9,64.45,9.09,-1.74,0.09,1.73,1.13,0,">1 nonsynonymous","V11G E141A",2
"lib2","SARS-CoV-2","CCTTGTTCGAGTTATG",1,5.57,9.24,-1.6,0.28,1.63,1.27,0.02,">1 nonsynonymous","A81K G152I",2
"lib2","SARS-CoV-2","CCTTGTTTCCATACTT",3,12.48,NA,NA,NA,NA,NA,NA,"stop","A18Y P82* I104N Q176L",4
"lib2","SARS-CoV-2","CCTTGTTTTTTGCCAG",4,5.22,NA,NA,NA,NA,NA,NA,"stop","G9N C150L V181*",3
"lib2","SARS-CoV-2","CCTTTAAACAAACAGA",2,41.79,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","C6L S53A K87V Y121L N157R",5
"lib2","SARS-CoV-2","CCTTTAAACGATACTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102G F156Y T193I",3
"lib2","SARS-CoV-2","CCTTTAACGCACCGCA",7,20.82,6,-4.84,2,3,1.23,0,">1 nonsynonymous","P82S V103R S113N S129I P169T",5
"lib2","SARS-CoV-2","CCTTTAACGTAAGAAA",1,29.63,8.86,-1.98,0.11,2.99,1,0,">1 nonsynonymous","G9R I142M G166W",3
"lib2","SARS-CoV-2","CCTTTAAGGAGGAATT",5,57.73,6,-4.84,1.33,1.5,1.16,0.02,">1 nonsynonymous","F8S Y35K F134H A145V",4
"lib2","SARS-CoV-2","CCTTTAATTAGGCACT",10,82.8,10.65,-0.19,0.06,2.86,1.12,0,">1 nonsynonymous","I2C Q163L G174M",3
"lib2","SARS-CoV-2","CCTTTACACAAAAACC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","CCTTTACACTAAAGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94S Y119W G146I",3
"lib2","SARS-CoV-2","CCTTTACACTTGCCAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","A33V R136* C158D",3
"lib2","SARS-CoV-2","CCTTTACCTCAACATC",22,111.83,6.09,-4.74,0.56,1.5,1.17,0.01,">1 nonsynonymous","V20E I104C",2
"lib2","SARS-CoV-2","CCTTTACTTAATGCTG",6,25.36,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V180R S200Y",2
"lib2","SARS-CoV-2","CCTTTAGAAATGTCAA",8,181.65,9.92,-0.91,0.04,2.84,1.05,0,"1 nonsynonymous","Y121A",1
"lib2","SARS-CoV-2","CCTTTAGAACTCACCG",9,71.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I80W N130E",2
"lib2","SARS-CoV-2","CCTTTAGAGTTCCACA",1,30.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P54K K94R L131N E141V Q168P",5
"lib2","SARS-CoV-2","CCTTTAGGCAGCTGAC",7,143.42,10.29,-0.55,0.04,2.83,1.04,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","CCTTTAGTAAATTGAA",7,0.8,NA,NA,NA,NA,NA,NA,"stop","T55A R127T E135L K198*",4
"lib2","SARS-CoV-2","CCTTTAGTCGGATACA",2,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F T55I G86T Y123V E141W",5
"lib2","SARS-CoV-2","CCTTTAGTGGTTAATA",7,58.04,10.21,-0.63,0.12,2.63,1.14,0.01,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CCTTTATAGGATATCT",12,133.57,10.2,-0.63,0.03,2.89,1.06,0,">1 nonsynonymous","N24Y G174A",2
"lib2","SARS-CoV-2","CCTTTATCATAATCAA",10,1.21,NA,NA,NA,NA,NA,NA,"stop","L5Q K26* D98F D112Q R127M",5
"lib2","SARS-CoV-2","CCTTTATCGCATAACC",2,14.25,7.58,-3.26,0.25,1.5,1.07,0.04,">1 nonsynonymous","T63N G86K K199S",3
"lib2","SARS-CoV-2","CCTTTATCGTAGAGGT",14,8.09,NA,NA,NA,NA,NA,NA,"stop","P96F K114* L122* K128G G172L",5
"lib2","SARS-CoV-2","CCTTTATCTAATCAAA",1,86.95,10.75,-0.08,0.03,2.98,1.04,0,">1 nonsynonymous","N64Y F134H",2
"lib2","SARS-CoV-2","CCTTTATGAGTCCCGA",7,13.48,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F12T A81S S113V Y123N",4
"lib2","SARS-CoV-2","CCTTTATGGCCCATTG",2,50.41,7.94,-2.9,0.16,2.61,1.02,0.01,">1 nonsynonymous","R27A N157Y",2
"lib2","SARS-CoV-2","CCTTTATTAAAAACAT",1,9.61,9.83,-1,0.16,2.45,1.15,0.01,">1 nonsynonymous","E10L A42S D90H",3
"lib2","SARS-CoV-2","CCTTTCAAAAGTAGGT",2,7.11,7.95,-2.89,0.25,2.19,1.05,0.03,">1 nonsynonymous","G117N A145L",2
"lib2","SARS-CoV-2","CCTTTCAAACAGACGG",7,10.95,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8N A42D K48R C61F A105C Y123E",6
"lib2","SARS-CoV-2","CCTTTCAAACCGTGAT",3,24.58,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6V V77S G101P L122P",4
"lib2","SARS-CoV-2","CCTTTCAGATAGGTTA",5,49.25,10.16,-0.68,0.06,2.77,1.06,0,">1 nonsynonymous","A22R C61T S129L",3
"lib2","SARS-CoV-2","CCTTTCAGGCTAAATT",3,0.92,NA,NA,NA,NA,NA,NA,"stop","S36* A105P F185S",3
"lib2","SARS-CoV-2","CCTTTCATAGGACACT",5,2.01,NA,NA,NA,NA,NA,NA,"stop","G9* N64S",2
"lib2","SARS-CoV-2","CCTTTCATTAACACGT",2,12.01,10.99,0.15,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CCTTTCATTGATCGCC",1,15.07,8.43,-2.4,0.12,2.01,1,0.01,">1 nonsynonymous","L5Y F62G I142R",3
"lib2","SARS-CoV-2","CCTTTCCCACCGCAAG",7,12.86,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13G C102H P133K S147D",4
"lib2","SARS-CoV-2","CCTTTCCTAACCACGG",8,20.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A105S K128L L183N K199L",4
"lib2","SARS-CoV-2","CCTTTCGACAGAGTCA",3,27.76,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","CCTTTCGACTAATCCC",18,381.44,10.85,0.02,0.05,2.94,1.07,0,"1 nonsynonymous","L122F",1
"lib2","SARS-CoV-2","CCTTTCGCGCCCCACT",19,420.87,10.81,-0.03,0.04,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CCTTTCTGTAGTCCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I Y91R",2
"lib2","SARS-CoV-2","CCTTTGAAGGACTATT",3,41.76,10.74,-0.1,0.04,2.94,1.05,0,"1 nonsynonymous","A42H",1
"lib2","SARS-CoV-2","CCTTTGACCCAAACTT",1,18.75,10.02,-0.81,0.14,2.71,1.04,0.01,">1 nonsynonymous","D90I S129D",2
"lib2","SARS-CoV-2","CCTTTGAGAGAAAATA",4,0,NA,NA,NA,NA,NA,NA,"stop","S41K D90R G116*",3
"lib2","SARS-CoV-2","CCTTTGAGGGACGTGA",18,163.47,9.84,-1,0.03,2.93,1.07,0,">1 nonsynonymous","V37S L125C T148G",3
"lib2","SARS-CoV-2","CCTTTGCAAAAATCAA",10,228.2,9.22,-1.62,0.05,2.68,1.09,0,">1 nonsynonymous","E76W S129K G152L",3
"lib2","SARS-CoV-2","CCTTTGCAAAATAAAC",2,14.05,8.46,-2.37,0.2,3,1,0.01,">1 nonsynonymous","Y119H Q168L",2
"lib2","SARS-CoV-2","CCTTTGGAGACTTCTA",8,99.42,9.56,-1.27,0.1,1.91,1.04,0,"1 nonsynonymous","G86A",1
"lib2","SARS-CoV-2","CCTTTGGGCCAGGAAC",4,1.82,NA,NA,NA,NA,NA,NA,"stop","G9* R16M C49F N118T",4
"lib2","SARS-CoV-2","CCTTTGGTAGTTACAT",3,7.09,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","W23F Y35K K87S N107H F156S",5
"lib2","SARS-CoV-2","CCTTTGTGGAATCCTA",4,0,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","CCTTTTAAAACATCAA",6,40.73,7.67,-3.17,0.31,1.5,1.13,0.02,">1 nonsynonymous","T55D A89E",2
"lib2","SARS-CoV-2","CCTTTTAAAGATCCGT",1,13.74,10.05,-0.79,0.12,2.68,1.04,0.01,">1 nonsynonymous","A18S F44C V115L",3
"lib2","SARS-CoV-2","CCTTTTAAAGATTTTT",2,16.22,10.54,-0.3,0.06,3,1,0,">1 nonsynonymous","I104M N120L",2
"lib2","SARS-CoV-2","CCTTTTAAAGTCACAC",2,28.34,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V37P L95W",2
"lib2","SARS-CoV-2","CCTTTTACATATGCTG",17,93.86,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y50N G86I W106A K199L",4
"lib2","SARS-CoV-2","CCTTTTATACCTTACT",3,72.43,9.86,-0.98,0.07,2.25,1.09,0,">1 nonsynonymous","I28M L38S F44E",3
"lib2","SARS-CoV-2","CCTTTTATAGCAAAAA",1,60.8,6,-4.84,1.95,1.5,1.12,0,">1 nonsynonymous","Y39D F99L N110K G166T K199T",5
"lib2","SARS-CoV-2","CCTTTTATCATTAGAC",6,50.24,9.98,-0.85,0.08,2.73,1.1,0,">1 nonsynonymous","F44S G116D N130I L187R",4
"lib2","SARS-CoV-2","CCTTTTCAGTTGAAGC",5,82.95,9.5,-1.34,0.07,2.49,1.04,0,">1 nonsynonymous","P133M P169S",2
"lib2","SARS-CoV-2","CCTTTTCATTCTTACC",6,35.66,6,-4.84,1.12,1.5,1.06,0.01,">1 nonsynonymous","L5T V103E S139Q G146E P149H",5
"lib2","SARS-CoV-2","CCTTTTCCTTGGTGCA",2,58.89,8.15,-2.69,0.13,2.02,1.09,0.01,">1 nonsynonymous","N4F P7H Y123K T170L",4
"lib2","SARS-CoV-2","CCTTTTCGTGCTTAAG",2,18.85,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A81H P96G S113V",3
"lib2","SARS-CoV-2","CCTTTTCTGGGACATC",5,0.46,NA,NA,NA,NA,NA,NA,"stop","V37* K198L",2
"lib2","SARS-CoV-2","CCTTTTGAATCCCTCG",7,116.37,10.63,-0.21,0.03,2.89,1.04,0,">1 nonsynonymous","N13D P197Q",2
"lib2","SARS-CoV-2","CCTTTTGGCTAACTAG",5,73.6,9.67,-1.17,0.08,2.41,1.09,0,">1 nonsynonymous","G9F Y91V",2
"lib2","SARS-CoV-2","CCTTTTTACAGCTTTA",3,22.66,8.97,-1.87,0.18,1.54,1.16,0.01,">1 nonsynonymous","S36M I80M P149L",3
"lib2","SARS-CoV-2","CCTTTTTACAGTGGGT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib2","SARS-CoV-2","CCTTTTTACCTGCAAG",9,119.23,9.88,-0.96,0.06,2.19,1.04,0,">1 nonsynonymous","V37N L60S A81C",3
"lib2","SARS-CoV-2","CCTTTTTGCTTAAAAA",10,156.62,10.35,-0.49,0.05,2.88,1.08,0,">1 nonsynonymous","S29G F62L S184M",3
"lib2","SARS-CoV-2","CGAAAAAAAATGACAG",13,127.09,7.09,-3.75,0.28,1.5,1.16,0.01,">1 nonsynonymous","A14F Q144L",2
"lib2","SARS-CoV-2","CGAAAAAAAGTCTCGC",1,46.4,6,-4.84,2,3,1.04,0,">1 nonsynonymous","N92I G101I",2
"lib2","SARS-CoV-2","CGAAAAAACAACATTA",4,75.4,7.88,-2.96,0.31,1.66,1.2,0.03,"1 nonsynonymous","R127E",1
"lib2","SARS-CoV-2","CGAAAAAACCATTCGA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","C6L A14* L57S N64I Y93S F99W Q144Y",7
"lib2","SARS-CoV-2","CGAAAAAACCCCAACC",5,42.37,10.6,-0.23,0.07,2.99,1,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","CGAAAAAACCGAGTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P F44H L60R L95H D112C L122V P149M V180D",8
"lib2","SARS-CoV-2","CGAAAAAAGACAGAAA",5,27.01,6.04,-4.79,1.2,1.5,1.21,0.04,">1 nonsynonymous","S45P P96L K128I E141S",4
"lib2","SARS-CoV-2","CGAAAAAAGGATAACA",12,119.59,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","V103Y",1
"lib2","SARS-CoV-2","CGAAAAAATTTATGGA",12,86.14,6.07,-4.77,0.89,1.5,1.22,0.02,">1 nonsynonymous","R124P C150P",2
"lib2","SARS-CoV-2","CGAAAAACACGTATTA",6,28.91,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G51F V71R F167T",3
"lib2","SARS-CoV-2","CGAAAAACCCATGCAT",2,111.31,9.55,-1.28,0.08,2.05,1.02,0,">1 nonsynonymous","C6F A14M A105S",3
"lib2","SARS-CoV-2","CGAAAAACGCTGAACT",1,45.44,10.59,-0.24,0.04,3,1,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","CGAAAAACGCTTTAAA",2,14.25,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S69R T100W C150T S184V",4
"lib2","SARS-CoV-2","CGAAAAACTGTGAGAT",5,80.6,10.87,0.03,0.06,2.95,1.07,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","CGAAAAACTTGTCCCA",7,77.32,8.15,-2.68,0.1,1.7,1.1,0,">1 nonsynonymous","P133T E141D F160I G174W",4
"lib2","SARS-CoV-2","CGAAAAAGACGAGACG",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S C102R",2
"lib2","SARS-CoV-2","CGAAAAAGAGAGCGTT",2,0.93,NA,NA,NA,NA,NA,NA,"stop","L5A Y21* N118F",3
"lib2","SARS-CoV-2","CGAAAAAGATGCAGCA",15,57.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14N F70L Q79R A105V S147H S184R",6
"lib2","SARS-CoV-2","CGAAAAAGCTAGATTA",4,0.24,NA,NA,NA,NA,NA,NA,"stop","F47N V77* Y91P A105F R127*",5
"lib2","SARS-CoV-2","CGAAAAAGTCTTAAGC",5,0.61,NA,NA,NA,NA,NA,NA,"stop","P7C T15S N24L T46* F160D",5
"lib2","SARS-CoV-2","CGAAAAAGTCTTTTAA",1,14.34,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","S41W K48N I88E",3
"lib2","SARS-CoV-2","CGAAAAATAACATAAA",4,59.77,10.05,-0.79,0.07,2.54,1.04,0,">1 nonsynonymous","N40G Y178L",2
"lib2","SARS-CoV-2","CGAAAAATAATGAAGT",5,166.8,10.75,-0.08,0.03,2.87,1.06,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","CGAAAAATGACTTGCC",19,270.62,9.92,-0.91,0.06,2.47,1.06,0,">1 nonsynonymous","A14V R27L K114L T201G",4
"lib2","SARS-CoV-2","CGAAAAATGGTCAGAC",1,10.99,8.85,-1.99,0.31,1.5,1.06,0.05,">1 nonsynonymous","N13L L60R V180I",3
"lib2","SARS-CoV-2","CGAAAACAAAAGATAA",2,6.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V A81V",2
"lib2","SARS-CoV-2","CGAAAACAAGTATTGT",6,46.63,8.66,-2.18,0.13,1.69,1.06,0.01,">1 nonsynonymous","I28Q Y39N S45T V115Y",4
"lib2","SARS-CoV-2","CGAAAACAATAGATCC",17,73.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19W D137P",2
"lib2","SARS-CoV-2","CGAAAACACACGATGT",2,44.99,9.59,-1.24,0.06,2.9,1.08,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","CGAAAACACCGTAAAG",1,4.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147L",1
"lib2","SARS-CoV-2","CGAAAACAGCCCAACA",3,70.96,9.83,-1.01,0.07,2.91,1.05,0,">1 nonsynonymous","D34N F156K",2
"lib2","SARS-CoV-2","CGAAAACCAAATACAC",8,29.6,6.97,-3.87,0.25,1.51,1.16,0.01,">1 nonsynonymous","F12A D90Y P149S",3
"lib2","SARS-CoV-2","CGAAAACCCCAAAACA",7,162.89,10.86,0.03,0.04,2.95,1.07,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","CGAAAACCTGTCGAGT",10,3.29,NA,NA,NA,NA,NA,NA,"stop","V37T T85D P96* V103L R127A D137H",6
"lib2","SARS-CoV-2","CGAAAACGACTGCTCA",4,2.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGAAAACGCTATCGCA",6,73.58,9.71,-1.13,0.06,1.98,1.03,0,">1 nonsynonymous","A105S R127G A190V K199A",4
"lib2","SARS-CoV-2","CGAAAACTATGATAAA",3,36.72,8.91,-1.93,0.07,2.04,1.09,0,">1 nonsynonymous","S45P N107K",2
"lib2","SARS-CoV-2","CGAAAACTGATGTGTG",9,202.63,10.64,-0.19,0.02,2.92,1.07,0,">1 nonsynonymous","T63K T85Y",2
"lib2","SARS-CoV-2","CGAAAACTTCCATATG",4,43.93,8.28,-2.55,0.14,2.62,1.05,0.01,">1 nonsynonymous","K114G S129L G166T V173F",4
"lib2","SARS-CoV-2","CGAAAAGAAAAGATTA",7,0.82,NA,NA,NA,NA,NA,NA,"stop","P149*",1
"lib2","SARS-CoV-2","CGAAAAGAAACTTCTT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","Y66V D90T N118L G155A G174*",5
"lib2","SARS-CoV-2","CGAAAAGAACAAGAGT",14,0.53,NA,NA,NA,NA,NA,NA,"stop","R27M C61* G83H Y93D V181S P197G S200A",7
"lib2","SARS-CoV-2","CGAAAAGAATATAAAC",8,142.12,10.58,-0.25,0.02,2.92,1.07,0,">1 nonsynonymous","F12I K199E",2
"lib2","SARS-CoV-2","CGAAAAGACATGCAAC",4,67.16,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","L5Q P54G P82N D90M G117T K198N",6
"lib2","SARS-CoV-2","CGAAAAGAGAGACTGC",6,1.04,NA,NA,NA,NA,NA,NA,"stop","L5* C61G R136S Y175W",4
"lib2","SARS-CoV-2","CGAAAAGCCAAAAGAA",2,9.96,6,-4.84,1.77,1.5,1.02,0.01,">1 nonsynonymous","K26F D137Q C150P N171S",4
"lib2","SARS-CoV-2","CGAAAAGCGGAGAAAC",8,89.21,10.78,-0.05,0.04,2.99,1.03,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","CGAAAAGGACTTGAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","E10* C61L G166N",3
"lib2","SARS-CoV-2","CGAAAAGTACAACTGT",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S F134L",2
"lib2","SARS-CoV-2","CGAAAAGTATTGATTG",7,3.18,NA,NA,NA,NA,NA,NA,"stop","G9S T15* R127*",3
"lib2","SARS-CoV-2","CGAAAATAATCGAATC",8,81.71,9.25,-1.59,0.21,1.5,1.09,0.02,">1 nonsynonymous","D90R Y178R",2
"lib2","SARS-CoV-2","CGAAAATCATCTGTAA",11,162.18,10.27,-0.57,0.04,2.83,1.05,0,">1 nonsynonymous","S41K E141Y A192V",3
"lib2","SARS-CoV-2","CGAAAATCCCACGCCG",6,137.53,8.52,-2.32,0.07,2.13,1.08,0,">1 nonsynonymous","K56Y N107D",2
"lib2","SARS-CoV-2","CGAAAATGAAGACCAC",3,64.45,9.68,-1.15,0.14,2.07,1.09,0.01,">1 nonsynonymous","N40T K114F P133H",3
"lib2","SARS-CoV-2","CGAAAATGATCATATC",7,40.01,10.47,-0.37,0.05,2.95,1.06,0,">1 nonsynonymous","E10P P54M",2
"lib2","SARS-CoV-2","CGAAAATTAAACTTCT",2,51.79,10.78,-0.05,0.05,3,1,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","CGAAAATTAACATCCC",3,2.78,NA,NA,NA,NA,NA,NA,"stop","L38I I80* D98G",3
"lib2","SARS-CoV-2","CGAAAATTACAATCGA",3,25.39,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14K V20S A81V P96V I142R",5
"lib2","SARS-CoV-2","CGAAAATTACAGAAAG",16,234.75,9.55,-1.29,0.04,2.8,1.09,0,">1 nonsynonymous","S43V G74M D98N V115I",4
"lib2","SARS-CoV-2","CGAAAATTACGCACCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L T63I C158S",3
"lib2","SARS-CoV-2","CGAAAATTAGTACATA",2,99.45,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L57R P82Y L122Y V181M",4
"lib2","SARS-CoV-2","CGAAAATTAGTTATAG",1,43.57,10.84,0,0.07,2.89,1.14,0,"1 nonsynonymous","S200H",1
"lib2","SARS-CoV-2","CGAAAATTCAAATATT",2,30.84,9.29,-1.54,0.2,1.71,1.08,0.02,">1 nonsynonymous","P7T R136P",2
"lib2","SARS-CoV-2","CGAAAATTGAATGAAA",2,9.44,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A18N L60H Y93N T170L",4
"lib2","SARS-CoV-2","CGAAAATTTAGGCGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","A14* S36F A105T Y119R G174S",5
"lib2","SARS-CoV-2","CGAAAATTTATCAATC",1,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M D98E K128R",3
"lib2","SARS-CoV-2","CGAAAATTTTTACTGA",4,30.72,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S19E T55L R136D",3
"lib2","SARS-CoV-2","CGAAACAAAAAAGCCA",1,6.39,6,-4.84,2,3,1.06,0,">1 nonsynonymous","T55L K94V A105I",3
"lib2","SARS-CoV-2","CGAAACAAAGAAAATC",9,56.16,7.63,-3.21,0.19,1.5,1.08,0.01,">1 nonsynonymous","C61L G83K D90V P149C",4
"lib2","SARS-CoV-2","CGAAACAAAGACATTA",10,6.88,NA,NA,NA,NA,NA,NA,"stop","G51* N58M D98G S147C G155R T201V",6
"lib2","SARS-CoV-2","CGAAACAAATAAAAGC",4,27.12,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4P S53F R124V P197V",4
"lib2","SARS-CoV-2","CGAAACAAATGACATA",16,262.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q168H",1
"lib2","SARS-CoV-2","CGAAACAAGGTGACTT",5,29.55,10.62,-0.21,0.05,3,1.01,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","CGAAACACCAAACAAC",5,124.33,10.84,0,0.05,2.93,1.05,0,">1 nonsynonymous","S53L N110R",2
"lib2","SARS-CoV-2","CGAAACACCAATTCAG",6,232.33,9.8,-1.04,0.05,2.5,1.08,0,">1 nonsynonymous","Q79W T201V",2
"lib2","SARS-CoV-2","CGAAACACCGAGGGTT",16,6.82,NA,NA,NA,NA,NA,NA,"stop","C61L R78* S139* V153L",4
"lib2","SARS-CoV-2","CGAAACACGAAAGGAC",9,0.13,NA,NA,NA,NA,NA,NA,"stop","L95* N107V",2
"lib2","SARS-CoV-2","CGAAACACGAGCTGCG",6,1.57,NA,NA,NA,NA,NA,NA,"stop","I72* D98N N120K",3
"lib2","SARS-CoV-2","CGAAACACGTAACACA",4,103.48,6.14,-4.7,0.61,1.5,1.13,0.01,">1 nonsynonymous","G83H Y121L F167L",3
"lib2","SARS-CoV-2","CGAAACACTGGGATAT",5,58.53,9.98,-0.86,0.1,2.73,1,0,">1 nonsynonymous","N4Q L38W P149F",3
"lib2","SARS-CoV-2","CGAAACACTTCAATTC",2,17.28,9.84,-1,0.17,2.4,1.04,0.01,">1 nonsynonymous","V11S V153Q",2
"lib2","SARS-CoV-2","CGAAACAGATAATTAG",13,166.85,10.15,-0.69,0.04,2.79,1.04,0,">1 nonsynonymous","Y39T N130G T140C S184H",4
"lib2","SARS-CoV-2","CGAAACATCGTTATAC",8,78.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R73L G146L",2
"lib2","SARS-CoV-2","CGAAACATCTAATTTT",11,94.74,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Q84T F99S N110S N120M G155T",5
"lib2","SARS-CoV-2","CGAAACATGTAACTCT",5,36.29,10.85,0.02,0.12,2.86,1.16,0.01,">1 nonsynonymous","V37L K56N K199M",3
"lib2","SARS-CoV-2","CGAAACATTATCCTAA",13,342.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N24L G155Y Y165L V173A",4
"lib2","SARS-CoV-2","CGAAACATTCTAGGTA",3,18.14,9.3,-1.53,0.11,1.97,1,0,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","CGAAACCATATAAAAG",6,172.15,10.8,-0.04,0.04,2.86,1.12,0,"1 nonsynonymous","F160S",1
"lib2","SARS-CoV-2","CGAAACCCACTTGATT",6,42.09,9.32,-1.52,0.1,1.94,1.1,0.01,">1 nonsynonymous","L5T A22S Q84D",3
"lib2","SARS-CoV-2","CGAAACCCCTATCGAT",4,92.24,10.62,-0.21,0.03,2.97,1.04,0,">1 nonsynonymous","K56S K87S L122S",3
"lib2","SARS-CoV-2","CGAAACCCCTCTGAAC",14,71.76,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D90A G101L",2
"lib2","SARS-CoV-2","CGAAACCCTTCGATTA",14,139.34,10.42,-0.42,0.04,2.96,1.06,0,">1 nonsynonymous","R78D I104A",2
"lib2","SARS-CoV-2","CGAAACCGATAAAAGA",5,4.74,NA,NA,NA,NA,NA,NA,"stop","I80K A145C T201*",3
"lib2","SARS-CoV-2","CGAAACCTAATTTGCG",13,44.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F62S F99Q Y165W",3
"lib2","SARS-CoV-2","CGAAACCTAGAACATT",1,37.87,10.58,-0.26,0.07,2.91,1.02,0,"1 nonsynonymous","F99W",1
"lib2","SARS-CoV-2","CGAAACCTGATAATTG",7,45.86,8.87,-1.97,0.05,2.96,1.08,0,"1 nonsynonymous","N157H",1
"lib2","SARS-CoV-2","CGAAACCTGCAACGAA",7,26.23,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L57N V103L",2
"lib2","SARS-CoV-2","CGAAACGAATAAAATT",9,66.14,9.92,-0.92,0.07,2.65,1.04,0,">1 nonsynonymous","D34I K114E",2
"lib2","SARS-CoV-2","CGAAACGACCACACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2R G9* T15S Y35L K48R Q84C",6
"lib2","SARS-CoV-2","CGAAACGCCTCAATCA",4,35.33,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I80K Y121N K128M",3
"lib2","SARS-CoV-2","CGAAACGCCTCACCCT",4,40.33,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","E10S V20K V180R",3
"lib2","SARS-CoV-2","CGAAACGTGAATATAG",4,11.83,6.36,-4.47,0.35,3,1.11,0.01,">1 nonsynonymous","G51R Q79L I88E Y93K",4
"lib2","SARS-CoV-2","CGAAACTAATGATTAG",1,15.64,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S45L A105K Y123Q",3
"lib2","SARS-CoV-2","CGAAACTATTATAAGT",9,43.03,9.1,-1.74,0.38,1.5,1,0.06,">1 nonsynonymous","T3R Y35L P54T V103A R136S",5
"lib2","SARS-CoV-2","CGAAACTATTCAAAAT",5,29.97,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","R16C K87E D97S N109I S139I F156G Y175S S200C",8
"lib2","SARS-CoV-2","CGAAACTCACCCTAGG",3,62.42,9.77,-1.07,0.07,2.62,1.09,0,">1 nonsynonymous","C6M R27S",2
"lib2","SARS-CoV-2","CGAAACTCGTAGAATC",21,170,10.79,-0.05,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAACTGGCGAGTAG",1,14.76,8.3,-2.54,0.09,2.52,1.04,0,">1 nonsynonymous","L57M D98T G117T",3
"lib2","SARS-CoV-2","CGAAAGAACACTAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","T15V S29* D97Y",3
"lib2","SARS-CoV-2","CGAAAGAATGATCAGG",5,130.92,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A18T L38W F44L R136N Q176W",5
"lib2","SARS-CoV-2","CGAAAGAATTAAATTA",5,56.45,10.75,-0.08,0.03,2.87,1.13,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","CGAAAGATAAAGCTGG",19,216.07,10.63,-0.21,0.02,2.92,1.07,0,">1 nonsynonymous","T3G P54L L122G S129D P149L",5
"lib2","SARS-CoV-2","CGAAAGATTCGGGATG",9,201.5,10.81,-0.02,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAAGCCTTCCCTTC",4,23.54,10.8,-0.04,0.06,2.95,1.05,0,">1 nonsynonymous","N1R P197E",2
"lib2","SARS-CoV-2","CGAAAGCTAGCTAACA",3,39.74,6,-4.84,2,1.56,1.13,0.02,">1 nonsynonymous","L162Y Q176A",2
"lib2","SARS-CoV-2","CGAAAGGAAGTTTAAC",2,12.81,9.99,-0.84,0.16,2.07,1.14,0.02,">1 nonsynonymous","G9L N13L",2
"lib2","SARS-CoV-2","CGAAAGGTGTTTAACT",8,98.94,6.28,-4.55,0.8,1.5,1.28,0.03,">1 nonsynonymous","L5Q W23V D90N G146N G152S",5
"lib2","SARS-CoV-2","CGAAAGTAGGATATAG",4,0.79,NA,NA,NA,NA,NA,NA,"stop","G9P A33* P54E D59A N64W",5
"lib2","SARS-CoV-2","CGAAAGTAGTGCCACC",3,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L C61D D90L N118Y F126C P149S F156L",7
"lib2","SARS-CoV-2","CGAAAGTATATAACCA",8,90.02,9.94,-0.9,0.06,2.24,1,0,">1 nonsynonymous","G83K K94V T100L K198R",4
"lib2","SARS-CoV-2","CGAAAGTATGATTAAG",6,11.63,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A22T I104S G166I N171S",4
"lib2","SARS-CoV-2","CGAAAGTATGCCACGA",1,6.92,10.02,-0.81,0.18,2.27,1,0.02,">1 nonsynonymous","K26W Y35M R136L T201M",4
"lib2","SARS-CoV-2","CGAAAGTCCAATATGG",3,23.03,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","V11T N58Y L95R N151S",4
"lib2","SARS-CoV-2","CGAAAGTGAACATGAT",8,64.89,10.8,-0.04,0.07,2.92,1.11,0,"1 nonsynonymous","Y39Q",1
"lib2","SARS-CoV-2","CGAAAGTGACGAAGGG",13,262.57,9.51,-1.33,0.02,2.94,1.08,0,">1 nonsynonymous","N64A Y119H Y143F",3
"lib2","SARS-CoV-2","CGAAAGTGACGTTGAG",12,2.58,NA,NA,NA,NA,NA,NA,"stop","A22* I28M Q84S",3
"lib2","SARS-CoV-2","CGAAAGTTCTCGTCCA",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L V77K I88N G101L I142F Y165L T201L",7
"lib2","SARS-CoV-2","CGAAAGTTTGAAAATT",2,4.34,NA,NA,NA,NA,NA,NA,"stop","G51* N58M R136K F167I C195G",5
"lib2","SARS-CoV-2","CGAAATAAACCTAAAG",6,37.53,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2T D68L G83L T100S I104T N130Y T140S",7
"lib2","SARS-CoV-2","CGAAATAAAGGCCCGT",2,226.77,8.16,-2.67,0.13,1.97,1.11,0.01,">1 nonsynonymous","N120P I138T G166P",3
"lib2","SARS-CoV-2","CGAAATAAATCAACGT",13,246.9,6.33,-4.5,0.36,1.5,1.14,0.01,">1 nonsynonymous","S113L K128G P149L",3
"lib2","SARS-CoV-2","CGAAATAAGGGGACAT",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K N130A V180K",3
"lib2","SARS-CoV-2","CGAAATAAGTACTAAT",2,36.64,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5T L38I F44C N157V",4
"lib2","SARS-CoV-2","CGAAATAATGATGAAT",7,75.34,10.85,0.01,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAATAATTATTAAG",4,49.52,9.18,-1.65,0.05,2.92,1.09,0,">1 nonsynonymous","N40Y Y119S",2
"lib2","SARS-CoV-2","CGAAATACAATCATAT",2,2.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","CGAAATACACAAGTAA",12,43.91,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S45D G101R",2
"lib2","SARS-CoV-2","CGAAATACAGGCAGAG",4,30.07,9.65,-1.19,0.08,1.91,1.11,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","CGAAATACATGTGCAC",5,6.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103M G146W",2
"lib2","SARS-CoV-2","CGAAATACCGGACTAT",2,6.42,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","R25K A89N K128M T170L R179I",5
"lib2","SARS-CoV-2","CGAAATACTTCTCACC",5,32.87,10.41,-0.43,0.07,2.99,1.01,0,">1 nonsynonymous","G9K A22E E76D",3
"lib2","SARS-CoV-2","CGAAATAGTTACGGTA",5,37.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41R F62L E76S K132A V153W",5
"lib2","SARS-CoV-2","CGAAATATACCGGCTG",11,111,6,-4.84,2,2.23,1.14,0,">1 nonsynonymous","Y21K V115T F167R P197L",4
"lib2","SARS-CoV-2","CGAAATATTTCTAATG",8,2.84,NA,NA,NA,NA,NA,NA,"stop","T55* D90E K114N",3
"lib2","SARS-CoV-2","CGAAATCACCCTAGAA",1,26.93,10.56,-0.28,0.08,2.95,1.07,0,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","CGAAATCATATGTCAA",5,28.13,10.82,-0.02,0.04,2.95,1.04,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","CGAAATCATGTTCAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C61R Y91M D112*",3
"lib2","SARS-CoV-2","CGAAATCATTTTTATT",2,33.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G166M Q176V P191Y",3
"lib2","SARS-CoV-2","CGAAATCGAAAATCAA",3,20.56,10.01,-0.83,0.19,1.83,1.08,0.02,">1 nonsynonymous","G51I Y143H",2
"lib2","SARS-CoV-2","CGAAATCGATGTCACG",4,141.35,10.82,-0.02,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAATCGTAATTCGG",2,80.2,10.7,-0.14,0.04,2.96,1.04,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","CGAAATCGTCAATCTA",2,1.07,NA,NA,NA,NA,NA,NA,"stop","T15Y Y39* D90A P177G",4
"lib2","SARS-CoV-2","CGAAATCTAAAGAAAA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","N118* I138A P149L T201S",4
"lib2","SARS-CoV-2","CGAAATCTCTAAATGA",16,100.26,6,-4.84,2,3,1.18,0,">1 nonsynonymous","E10Y Q84R N92L N109V F134R T201L",6
"lib2","SARS-CoV-2","CGAAATCTGTACCCAT",2,55.31,10.82,-0.01,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAATGACTTACTAA",3,6.28,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41Y Y93L L183N",3
"lib2","SARS-CoV-2","CGAAATGAGCTCTTCT",6,63.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A89R L95T K128P",3
"lib2","SARS-CoV-2","CGAAATGAGTTAAGTA",3,18.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F62V W106L L125M R136K Q176G",5
"lib2","SARS-CoV-2","CGAAATGATACAATTT",9,118.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5F N24L S43K T100G I142L P149L",6
"lib2","SARS-CoV-2","CGAAATGCTGATTTCT",26,339.85,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R27P Y93C",2
"lib2","SARS-CoV-2","CGAAATGGGAAATTAC",2,47.67,9.82,-1.02,0.06,2.01,1,0,">1 nonsynonymous","R16L P133S E141L",3
"lib2","SARS-CoV-2","CGAAATGTAAAATGTG",5,128.54,10.8,-0.03,0.05,2.93,1.06,0,">1 nonsynonymous","L5E S29D",2
"lib2","SARS-CoV-2","CGAAATGTATACTGGA",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K F62E D137F",3
"lib2","SARS-CoV-2","CGAAATGTCCATAATA",5,43.59,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F44E G51T Y66V T100Y S129T A145E T201H",7
"lib2","SARS-CoV-2","CGAAATTACCAGAAAT",2,47.7,8.28,-2.55,0.17,2.01,1.11,0.01,">1 nonsynonymous","Y121M N157M P197E",3
"lib2","SARS-CoV-2","CGAAATTAGAAACCAA",4,1.79,NA,NA,NA,NA,NA,NA,"stop","G9S F47R C61* A89R G116Y P161* V180D",7
"lib2","SARS-CoV-2","CGAAATTATAAAAGGA",3,63.09,10.8,-0.04,0.06,2.9,1.11,0,"1 nonsynonymous","T201F",1
"lib2","SARS-CoV-2","CGAAATTATAAGAAAA",2,58.73,7.94,-2.9,0.11,2.34,1.06,0,">1 nonsynonymous","C150F C158N",2
"lib2","SARS-CoV-2","CGAAATTATTATAAAA",3,7.44,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","Q84N V103K",2
"lib2","SARS-CoV-2","CGAAATTCTGAATTCG",2,32.02,10.24,-0.59,0.05,2.9,1.03,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","CGAAATTGTTAGATGA",2,6.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G74A D98M Y121M F160N",5
"lib2","SARS-CoV-2","CGAAATTTTTTAGGTT",5,75.43,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23K L60C K94P G172H T201S",5
"lib2","SARS-CoV-2","CGAACAAAAAAAACGC",3,0.6,NA,NA,NA,NA,NA,NA,"stop","L122* K198G",2
"lib2","SARS-CoV-2","CGAACAAAAAAAGTGG",3,8.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","CGAACAAACCTACGAT",8,0.14,NA,NA,NA,NA,NA,NA,"stop","K87S I142*",2
"lib2","SARS-CoV-2","CGAACAAATATGAGCT",13,102.54,10.44,-0.4,0.02,2.91,1.06,0,">1 nonsynonymous","V11I D75L",2
"lib2","SARS-CoV-2","CGAACAAATCTTAGAC",3,68.73,10.47,-0.37,0.06,2.93,1.04,0,">1 nonsynonymous","T55M T85S G166N",3
"lib2","SARS-CoV-2","CGAACAAATGAAAGCG",2,7.47,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","T15H R25P",2
"lib2","SARS-CoV-2","CGAACAAATTTAAAAG",3,124.36,10.96,0.13,0.07,2.97,1.04,0,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","CGAACAACACAGAATT",4,54.28,9.87,-0.97,0.07,2.79,1.06,0,">1 nonsynonymous","K114M Y121L L162V",3
"lib2","SARS-CoV-2","CGAACAACAGGCCATG",5,38.16,6.22,-4.62,0.51,1.5,1.12,0.01,">1 nonsynonymous","W23K P82V D137M P149C",4
"lib2","SARS-CoV-2","CGAACAACATAGCGAG",5,7.87,6.1,-4.73,0.91,3,1.13,0.02,">1 nonsynonymous","A33Y S43R N118S R124D",4
"lib2","SARS-CoV-2","CGAACAACGAAATAAG",12,198.11,10.74,-0.1,0.02,2.95,1.06,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","CGAACAACGCTAACAT",2,11.48,11.34,0.5,0.17,2.84,1.14,0.01,"1 nonsynonymous","V115I",1
"lib2","SARS-CoV-2","CGAACAACTCTCCACA",3,19.35,10.64,-0.2,0.05,2.83,1.14,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","CGAACAAGCAATCTAC",6,4.51,NA,NA,NA,NA,NA,NA,"stop","Y123M S139A F167W K198*",4
"lib2","SARS-CoV-2","CGAACACAAAAAGTCT",3,70.06,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T46V N58Y G83M Y121R F156M K199I",6
"lib2","SARS-CoV-2","CGAACACACGCCTCAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76S R127W Q163F G172N",4
"lib2","SARS-CoV-2","CGAACACAGTGTACAG",5,60.82,7.92,-2.92,0.33,1.5,1.09,0.04,">1 nonsynonymous","K56S T63N L122C G146V",4
"lib2","SARS-CoV-2","CGAACACCATCAACCA",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I F99P",2
"lib2","SARS-CoV-2","CGAACACCCAGCCAGG",5,199.54,10.41,-0.43,0.03,2.92,1.08,0,"1 nonsynonymous","F156I",1
"lib2","SARS-CoV-2","CGAACACTACAACCTT",1,61.51,10.17,-0.66,0.05,2.69,1.08,0,">1 nonsynonymous","D90T S129I",2
"lib2","SARS-CoV-2","CGAACACTACTCTGGA",3,158.9,9.35,-1.49,0.07,2.15,1.06,0,">1 nonsynonymous","K26T P96S Q176M",3
"lib2","SARS-CoV-2","CGAACAGACAAACCAA",10,23.6,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S19R L122E F167M",3
"lib2","SARS-CoV-2","CGAACATAAGGCGACG",5,42.97,10.19,-0.65,0.06,2.78,1.11,0,">1 nonsynonymous","P7M T46F S139T",3
"lib2","SARS-CoV-2","CGAACATAGTTTATGC",6,33.96,9.97,-0.87,0.12,2.54,1.04,0.01,">1 nonsynonymous","N13G Y91L I138L",3
"lib2","SARS-CoV-2","CGAACATATACCTTAA",6,42.33,10.16,-0.68,0.07,2.66,1,0,">1 nonsynonymous","N1V F8M S129F",3
"lib2","SARS-CoV-2","CGAACATCAGAGGCAG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","R27* E154W",2
"lib2","SARS-CoV-2","CGAACATCCTACCGAA",3,27.78,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y93A A105K L125C F167L",4
"lib2","SARS-CoV-2","CGAACATCGTAATAAA",2,39.45,10.71,-0.13,0.04,2.95,1.07,0,">1 nonsynonymous","L60R K128R",2
"lib2","SARS-CoV-2","CGAACATGACACGGTA",1,8.94,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y91H S108I",2
"lib2","SARS-CoV-2","CGAACATTCATTACAA",8,2.21,NA,NA,NA,NA,NA,NA,"stop","V37L C102* G117T",3
"lib2","SARS-CoV-2","CGAACATTCTATGTAC",2,54.16,10.77,-0.07,0.06,2.93,1.11,0,"1 nonsynonymous","N110E",1
"lib2","SARS-CoV-2","CGAACATTGACGTAAC",7,55.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R K94V A105W P197S",4
"lib2","SARS-CoV-2","CGAACCAAACTTCCAA",6,95.56,10.71,-0.13,0.06,2.84,1.14,0,">1 nonsynonymous","T85A D98R L122R",3
"lib2","SARS-CoV-2","CGAACCAACATTAAAA",12,317.32,10.18,-0.66,0.02,2.9,1.03,0,">1 nonsynonymous","K56V E154N V173C",3
"lib2","SARS-CoV-2","CGAACCAAGAGAAACC",2,33.56,10.82,-0.02,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACCAAGATAATTT",5,58.5,10.88,0.04,0.07,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACCAAGCCACTCT",8,21.9,6,-4.84,1.55,1.5,1.13,0.03,">1 nonsynonymous","F70L R179F",2
"lib2","SARS-CoV-2","CGAACCAATAACCCGT",12,126.15,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C31K I88Q",2
"lib2","SARS-CoV-2","CGAACCACACTCGACT",1,0.74,NA,NA,NA,NA,NA,NA,"stop","R16V W23* N64*",3
"lib2","SARS-CoV-2","CGAACCACTTAGTCCT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","L5M R27* F62S K87W L125E K132S Q163H",7
"lib2","SARS-CoV-2","CGAACCAGCAATGCAA",6,85.29,10.34,-0.49,0.04,2.87,1.07,0,">1 nonsynonymous","P7T S36I",2
"lib2","SARS-CoV-2","CGAACCATATAAAGCC",3,32.45,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14Y A81S A105D",3
"lib2","SARS-CoV-2","CGAACCATTAATCTCT",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGAACCCAAATCCACC",6,1.04,NA,NA,NA,NA,NA,NA,"stop","C49* Y91K S113I",3
"lib2","SARS-CoV-2","CGAACCCACAAAGGTA",3,39.04,6.23,-4.6,1.03,1.5,1.17,0.05,">1 nonsynonymous","E10I L38R Y119T",3
"lib2","SARS-CoV-2","CGAACCCCCAACTCCC",2,59.28,10.8,-0.04,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACCCCCGATTAAT",2,32.49,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6R V77R L95P Y119L G174Q",5
"lib2","SARS-CoV-2","CGAACCCGCGTGCGTC",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28P V77E",2
"lib2","SARS-CoV-2","CGAACCCTATTATACC",12,299.76,10.85,0.01,0.02,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACCGGACCTGCGG",6,58.23,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V103L R124G",2
"lib2","SARS-CoV-2","CGAACCGGACTGCGCA",1,60.93,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12M Y175T",2
"lib2","SARS-CoV-2","CGAACCTAAACTAGGC",7,2.7,NA,NA,NA,NA,NA,NA,"stop","I2L C61N F99* S113M",4
"lib2","SARS-CoV-2","CGAACCTAGTCTGAAT",4,50.61,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C6W R25L V77A D137K N157I",5
"lib2","SARS-CoV-2","CGAACCTCCGCATATA",4,72.89,10.76,-0.08,0.04,2.93,1.08,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","CGAACCTCGGACCACT",3,23.75,10.56,-0.28,0.08,3,1.02,0,"1 nonsynonymous","D34E",1
"lib2","SARS-CoV-2","CGAACCTCTAGCCCCA",2,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M V103G R124Y",3
"lib2","SARS-CoV-2","CGAACCTGAATATTAT",1,6.96,10.16,-0.68,0.18,2.53,1,0.01,"1 nonsynonymous","D112I",1
"lib2","SARS-CoV-2","CGAACCTGTAAATAGA",10,37.59,6,-4.84,2,1.5,1.36,0.03,">1 nonsynonymous","N1M C6L T55Y C61I D90S F160I",6
"lib2","SARS-CoV-2","CGAACCTTCGAATACA",1,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T G83T V103S Y119F",4
"lib2","SARS-CoV-2","CGAACGAAAAATTATG",1,8.53,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","E10L K87R P96V Y119V",4
"lib2","SARS-CoV-2","CGAACGAATGTACACC",17,222.9,9.32,-1.52,0.07,1.82,1.08,0,">1 nonsynonymous","L38R C61E K128Y",3
"lib2","SARS-CoV-2","CGAACGAATTAAGAAT",2,0.62,NA,NA,NA,NA,NA,NA,"stop","S36* D112A I138L",3
"lib2","SARS-CoV-2","CGAACGACATTACTTA",14,155.69,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C31S F70V",2
"lib2","SARS-CoV-2","CGAACGCATTATTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","K48* P133C",2
"lib2","SARS-CoV-2","CGAACGCCAGCTGTAA",5,71.46,10.8,-0.04,0.05,2.96,1.05,0,"1 nonsynonymous","T3I",1
"lib2","SARS-CoV-2","CGAACGCTAAAGTCAT",7,77.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K A81T A105V",3
"lib2","SARS-CoV-2","CGAACGGAATAAGGAA",1,17.06,10.85,0.02,0.12,3,1.03,0.01,"1 nonsynonymous","Q84M",1
"lib2","SARS-CoV-2","CGAACGGTGCGACTCA",1,43.38,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27Y C49I F99Y",3
"lib2","SARS-CoV-2","CGAACGTAGCGTTCTC",4,3.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131F",1
"lib2","SARS-CoV-2","CGAACGTGCCTTGGTA",6,136.45,10.91,0.07,0.06,2.94,1.08,0,">1 nonsynonymous","P54K T201K",2
"lib2","SARS-CoV-2","CGAACGTTATTAAGAG",2,5.61,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","T63S P149K V181H",3
"lib2","SARS-CoV-2","CGAACGTTCATCCAAA",16,23.42,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15V N118Q R136T V181S",4
"lib2","SARS-CoV-2","CGAACTAAAGTCATTG",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E I88Q",2
"lib2","SARS-CoV-2","CGAACTAACAAACACA",1,21.06,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","I2D F70L T148R F167L Y175S",5
"lib2","SARS-CoV-2","CGAACTAAGGCACATA",7,91.2,10.86,0.02,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACTAGGACAAAAG",1,1.7,NA,NA,NA,NA,NA,NA,"stop","F8* L57R",2
"lib2","SARS-CoV-2","CGAACTAGGTTATATC",2,24.75,9.34,-1.5,0.18,1.77,1.1,0.01,">1 nonsynonymous","T3S L60P G152I",3
"lib2","SARS-CoV-2","CGAACTATAGATTCTA",4,28.78,10.34,-0.5,0.1,2.67,1,0,">1 nonsynonymous","A42T D90R",2
"lib2","SARS-CoV-2","CGAACTATATACAATT",10,80.51,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y39R K87S N107L L122K R179S",5
"lib2","SARS-CoV-2","CGAACTATCGTAAACT",5,0,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib2","SARS-CoV-2","CGAACTATCTCTACCT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","V52C V71* I138S F185L",4
"lib2","SARS-CoV-2","CGAACTATTATAATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H I88W P96V",3
"lib2","SARS-CoV-2","CGAACTATTCCAATAC",8,18.28,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V11F Y21V D90A I104E R124M R136Q Y143K T170L",8
"lib2","SARS-CoV-2","CGAACTCAAGTAAAAC",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S G146S",2
"lib2","SARS-CoV-2","CGAACTCATAAAGCCT",4,24.88,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S41V P96Q Y165S T201M",4
"lib2","SARS-CoV-2","CGAACTCATAATTGTC",1,10.01,10.08,-0.75,0.15,2.57,1,0.01,"1 nonsynonymous","S69C",1
"lib2","SARS-CoV-2","CGAACTCCGAGGCCCC",3,45.72,9.93,-0.9,0.07,2.86,1.05,0,"1 nonsynonymous","N118V",1
"lib2","SARS-CoV-2","CGAACTCCGATTAGAT",4,63.27,8.08,-2.76,0.14,1.86,1.06,0.01,">1 nonsynonymous","A22D I104M Y143S",3
"lib2","SARS-CoV-2","CGAACTCCTAGAAACC",2,7.31,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2L P7E I88D",3
"lib2","SARS-CoV-2","CGAACTCGAAAATCAA",1,29.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G L60R S69G",3
"lib2","SARS-CoV-2","CGAACTCGCCTCTGGA",8,119.2,10.74,-0.09,0.03,2.94,1.08,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","CGAACTCTAAAAAAAT",13,176.16,10.46,-0.37,0.03,2.88,1.08,0,">1 nonsynonymous","A33M F44L",2
"lib2","SARS-CoV-2","CGAACTCTGAGAAACT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","G83R L131*",2
"lib2","SARS-CoV-2","CGAACTCTTATGAAAG",1,27.18,10.25,-0.58,0.09,2.85,1,0,">1 nonsynonymous","N24C S41A",2
"lib2","SARS-CoV-2","CGAACTGAGTACAGAC",1,31.27,7.66,-3.17,0.2,1.63,1.13,0.02,">1 nonsynonymous","P96R G117S",2
"lib2","SARS-CoV-2","CGAACTGTAATATAAA",3,2.15,NA,NA,NA,NA,NA,NA,"stop","C61* F99W",2
"lib2","SARS-CoV-2","CGAACTGTTCGGATAA",9,153.07,6.54,-4.29,0.26,1.5,1.14,0.01,">1 nonsynonymous","D68F Y121L G174N",3
"lib2","SARS-CoV-2","CGAACTTACGATTTCA",6,218.42,10.79,-0.05,0.05,2.86,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAACTTACGGATTGT",4,21.93,6,-4.84,1.69,3,1.14,0.01,">1 nonsynonymous","F70T N107A P149V A190G",4
"lib2","SARS-CoV-2","CGAACTTAGTGGGAGG",8,74.5,6,-4.84,2,1.5,1.24,0.03,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","CGAACTTCGTTATTGT",7,128.05,8.19,-2.65,0.13,1.67,1.12,0.01,">1 nonsynonymous","V11D I28C N151T",3
"lib2","SARS-CoV-2","CGAACTTGTTCTTACA",3,32.45,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y50D C61G A145C",3
"lib2","SARS-CoV-2","CGAACTTTAAAATGCT",2,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A R73E D90T P96M S200A",5
"lib2","SARS-CoV-2","CGAACTTTGTTCCCTA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I2S G83* G117R Y165N",4
"lib2","SARS-CoV-2","CGAACTTTTTGAGATA",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34G G174V",2
"lib2","SARS-CoV-2","CGAAGAAAACTTGGAA",13,165.14,10.38,-0.45,0.04,2.84,1.06,0,">1 nonsynonymous","N151V N171I",2
"lib2","SARS-CoV-2","CGAAGAAACCTAAACT",4,50.01,10.82,-0.01,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAGAAATACATCCA",8,78.47,6,-4.84,2,3,1.19,0,">1 nonsynonymous","K48L D90T Y121R",3
"lib2","SARS-CoV-2","CGAAGAAATGTACAAA",6,36.96,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T46L C61T G101L E135G T201G",5
"lib2","SARS-CoV-2","CGAAGAACCCTAGATG",4,73.2,9.66,-1.18,0.06,2.1,1.03,0,">1 nonsynonymous","T55F A81K K128C",3
"lib2","SARS-CoV-2","CGAAGAACGAATTTAT",3,39.04,10.84,0.01,0.06,2.99,1.05,0,"1 nonsynonymous","V115K",1
"lib2","SARS-CoV-2","CGAAGAAGTCATTCAA",9,75.47,8.63,-2.21,0.09,2.04,1.11,0,">1 nonsynonymous","V32P C61S G155L",3
"lib2","SARS-CoV-2","CGAAGAATAACCAAAC",12,137.35,8.47,-2.36,0.12,1.91,1.11,0.01,">1 nonsynonymous","F47V C61R E154W V173G",4
"lib2","SARS-CoV-2","CGAAGAATAATATCAA",1,11.74,9.4,-1.44,0.07,2.89,1.09,0,">1 nonsynonymous","P96A T170H",2
"lib2","SARS-CoV-2","CGAAGAATCCACTAAT",1,56.79,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I142G C150T F160Y",3
"lib2","SARS-CoV-2","CGAAGAATTCTTAAAA",4,45.43,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V77R G83D R127M F160K R179S",5
"lib2","SARS-CoV-2","CGAAGAATTTCGAGAA",4,69.78,6,-4.84,1.31,1.5,1.27,0.02,">1 nonsynonymous","N64Q Y93M A190K",3
"lib2","SARS-CoV-2","CGAAGACACATATGAG",3,13.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F17N D90R T100L",3
"lib2","SARS-CoV-2","CGAAGACATGACCTTA",4,58.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P82R G116H G166E",3
"lib2","SARS-CoV-2","CGAAGACTCATGATGT",3,43.2,10.7,-0.14,0.04,3,1.02,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","CGAAGACTCTACGGCT",2,60.66,10.64,-0.2,0.04,2.84,1.1,0,">1 nonsynonymous","D90A L95I",2
"lib2","SARS-CoV-2","CGAAGACTTATTGACT",1,17.74,6,-4.84,0.49,3,1.06,0,">1 nonsynonymous","P7V K56C D90Y L125R S164Q",5
"lib2","SARS-CoV-2","CGAAGAGGATAGATTT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","A42* E135T L162M",3
"lib2","SARS-CoV-2","CGAAGAGGATATGCAA",11,102.42,10.72,-0.11,0.03,2.95,1.05,0,">1 nonsynonymous","N58T L125I",2
"lib2","SARS-CoV-2","CGAAGATAGAACTTAG",1,8.85,8.28,-2.55,0.04,2.85,1,0,">1 nonsynonymous","G86A G146S",2
"lib2","SARS-CoV-2","CGAAGATGCATGCAAA",8,62.84,9.27,-1.56,0.39,1.5,1,0.07,">1 nonsynonymous","S41L T63F G83P D90S K199P",5
"lib2","SARS-CoV-2","CGAAGATGCTTGTTTA",2,25.59,6.9,-3.93,0.43,1.5,1,0.07,">1 nonsynonymous","V77N L95M Y119F",3
"lib2","SARS-CoV-2","CGAAGATGGATCACGG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F126V G155*",2
"lib2","SARS-CoV-2","CGAAGATGTAAGGTGT",5,48.13,10.09,-0.75,0.07,2.75,1.01,0,">1 nonsynonymous","N1L T15V",2
"lib2","SARS-CoV-2","CGAAGATGTATTTGAT",3,107.5,10.47,-0.37,0.06,2.91,1.04,0,">1 nonsynonymous","K56G Q84L S129K",3
"lib2","SARS-CoV-2","CGAAGATGTCTGCCAC",1,49.44,9.1,-1.73,0.07,2.95,1.07,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","CGAAGATGTTACATAA",4,64.37,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P161T Y175R",2
"lib2","SARS-CoV-2","CGAAGATGTTAGAGTG",15,279.36,10.83,-0.01,0.05,2.97,1.04,0,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","CGAAGATTATATACAA",1,14.04,6,-4.84,2,3,1.05,0,">1 nonsynonymous","N58F S113M P169R Y175L",4
"lib2","SARS-CoV-2","CGAAGATTGGAGGAAC",1,11.95,8.96,-1.87,0.17,1.5,1.06,0.02,">1 nonsynonymous","P82S D90N",2
"lib2","SARS-CoV-2","CGAAGCAGTTGAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37M C49R I138* P161T G196R",5
"lib2","SARS-CoV-2","CGAAGCGAACTGGGTA",14,82.65,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58V G101A",2
"lib2","SARS-CoV-2","CGAAGCGATTTTGCAT",8,3.55,NA,NA,NA,NA,NA,NA,"stop","V37N P54* G86C N120T",4
"lib2","SARS-CoV-2","CGAAGCGGCTAAGCAA",1,4.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","CGAAGCGGGAAAGCTG",3,21.02,10.4,-0.44,0.07,2.69,1.13,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","CGAAGCGGTGCCTGCA",3,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R V20L G86K G101R L122E E186V",6
"lib2","SARS-CoV-2","CGAAGCGTACTTCAAA",6,20.21,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F70L Q84F",2
"lib2","SARS-CoV-2","CGAAGCTATATAAACA",3,33.45,9.3,-1.53,0.08,1.83,1.07,0,">1 nonsynonymous","V11L K94G",2
"lib2","SARS-CoV-2","CGAAGCTATATCCCCC",8,65.78,6,-4.84,1.85,3,1.23,0.01,">1 nonsynonymous","R27L G146K Y165V",3
"lib2","SARS-CoV-2","CGAAGCTGGATTTTAG",1,12.1,10.9,0.07,0.18,2.42,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGAAGCTGTAGCCCAA",9,34.74,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V77E D98Y S113L T148Q",4
"lib2","SARS-CoV-2","CGAAGCTTCAGAGCCT",3,127.83,10.72,-0.11,0.03,2.94,1.08,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","CGAAGCTTTAAAATAT",7,146.39,10.63,-0.2,0.03,2.91,1.07,0,">1 nonsynonymous","G116K T140S",2
"lib2","SARS-CoV-2","CGAAGGAAAAGGGCCT",5,0,NA,NA,NA,NA,NA,NA,"stop","I2* D59I W106R",3
"lib2","SARS-CoV-2","CGAAGGAAACTAAAAA",3,11.85,8.34,-2.49,0.16,1.94,1.01,0.02,">1 nonsynonymous","C6F D97L Q144K G166Q",4
"lib2","SARS-CoV-2","CGAAGGAAGTTTCCGT",7,45.09,6,-4.84,1.42,3,1.18,0.01,">1 nonsynonymous","V37T G51N G86T W106Q F126Q",5
"lib2","SARS-CoV-2","CGAAGGAATAAGGAGT",3,13.41,8.87,-1.97,0.12,2.89,1,0,">1 nonsynonymous","Y119K R127A",2
"lib2","SARS-CoV-2","CGAAGGAATGAAACAC",1,7.98,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","I2S Y21Q Y39A F99S",4
"lib2","SARS-CoV-2","CGAAGGAGATTTCTTT",3,31.29,10.79,-0.05,0.05,3,1.03,0,">1 nonsynonymous","F12V Y35W",2
"lib2","SARS-CoV-2","CGAAGGCTAATGAGGG",2,17.58,10.46,-0.37,0.09,2.85,1,0,"1 nonsynonymous","F44P",1
"lib2","SARS-CoV-2","CGAAGGCTCCCAGTTA",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26G S108Y S129Q",3
"lib2","SARS-CoV-2","CGAAGGGAATTTAATA",5,0.33,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib2","SARS-CoV-2","CGAAGGGATGTCTAAT",3,21.35,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","E10L C61L A89T L95M G166D",5
"lib2","SARS-CoV-2","CGAAGGTTGAACAGAA",7,50.26,8.75,-2.09,0.2,1.5,1.04,0.02,">1 nonsynonymous","N4Q A105L S184I",3
"lib2","SARS-CoV-2","CGAAGTAAAAATCTAT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","Y35Q F47* K94M W106E P149S",5
"lib2","SARS-CoV-2","CGAAGTAAACTAAGGC",2,18.94,6.09,-4.74,1.31,1.5,1.09,0.03,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","CGAAGTAACGAAGCTG",6,20.51,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y123W A145F L162T V181G",4
"lib2","SARS-CoV-2","CGAAGTAAGGACACAG",3,62.11,8.52,-2.32,0.1,2.46,1.02,0,">1 nonsynonymous","I2T D90C G117R",3
"lib2","SARS-CoV-2","CGAAGTAATATGTTCG",11,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65K I88E D112L",3
"lib2","SARS-CoV-2","CGAAGTACAACTGTGC",6,30.67,8.18,-2.66,0.28,1.5,1.1,0.04,">1 nonsynonymous","I80P K114Y",2
"lib2","SARS-CoV-2","CGAAGTACTCAATGAA",4,60.33,9.37,-1.47,0.07,2.11,1.03,0,">1 nonsynonymous","V32K G86S P197H",3
"lib2","SARS-CoV-2","CGAAGTATACCCCAAA",4,81.88,10.9,0.06,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAGTATGACTACAA",8,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S A81S",2
"lib2","SARS-CoV-2","CGAAGTCAAAATTAGT",6,22.95,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F12C V103P",2
"lib2","SARS-CoV-2","CGAAGTCAATGCAAAA",4,94.17,10.59,-0.25,0.03,2.96,1.03,0,">1 nonsynonymous","P96S L187M",2
"lib2","SARS-CoV-2","CGAAGTCACAACACTC",24,142.81,6,-4.84,1.43,1.5,1.24,0.01,">1 nonsynonymous","L5R C49R A105L",3
"lib2","SARS-CoV-2","CGAAGTCACGGCGACA",4,42.14,10.84,0,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAGTCATCAGCCGT",6,18.32,7.5,-3.34,0.47,1.5,1.18,0.06,">1 nonsynonymous","V20L P149G",2
"lib2","SARS-CoV-2","CGAAGTCATGTTAACC",14,65.99,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T3A Y39W F62Q I80M S139V Y143L",6
"lib2","SARS-CoV-2","CGAAGTCGAAAAAGGG",5,35.75,6,-4.84,2,3,1.16,0.01,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","CGAAGTCGGTTTCATA",13,5.78,NA,NA,NA,NA,NA,NA,"stop","C6* D112S L125C T170I",4
"lib2","SARS-CoV-2","CGAAGTCTAGAAACAT",6,0.69,NA,NA,NA,NA,NA,NA,"stop","V11L T63Q T85S Y93* Q163C T170A",6
"lib2","SARS-CoV-2","CGAAGTCTGAACCCTT",3,137.74,10.78,-0.05,0.03,2.93,1.06,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","CGAAGTGAAAAAAATA",13,107.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95H K199G",2
"lib2","SARS-CoV-2","CGAAGTGGACATAAAT",11,87.45,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N13F T46N N107K G146V V173K",5
"lib2","SARS-CoV-2","CGAAGTGGGCAGGCCG",16,275,8.1,-2.74,0.11,2.24,1.09,0,">1 nonsynonymous","A89S D98Y K114N N120T",4
"lib2","SARS-CoV-2","CGAAGTTCCACCCAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39Q G196L",2
"lib2","SARS-CoV-2","CGAAGTTGATATACTG",18,121.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40C E76R Q84M N107M",4
"lib2","SARS-CoV-2","CGAAGTTGTGCCCACT",4,0,NA,NA,NA,NA,NA,NA,"stop","K56L I88R N118V K128*",4
"lib2","SARS-CoV-2","CGAAGTTTATAGGTAA",6,108.86,10.85,0.02,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAAGTTTGCATTCAG",5,84.89,9.98,-0.85,0.07,2.8,1.06,0,">1 nonsynonymous","V115L L162F",2
"lib2","SARS-CoV-2","CGAATAAAAATACTAT",10,84.2,7.98,-2.86,0.2,1.51,1.18,0.01,">1 nonsynonymous","K56L G86M",2
"lib2","SARS-CoV-2","CGAATAAACTACGATG",3,48.96,8.43,-2.4,0.15,2.47,1.05,0.01,">1 nonsynonymous","N157Y C195F",2
"lib2","SARS-CoV-2","CGAATAAACTGATGGT",4,44.53,10.78,-0.05,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAATAAATAGATTAC",3,29.52,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","CGAATAACACAATATA",8,4.27,NA,NA,NA,NA,NA,NA,"stop","D90Q F99* T148Y",3
"lib2","SARS-CoV-2","CGAATAACACCAAAAG",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31K T140N",2
"lib2","SARS-CoV-2","CGAATAACATAAGCCT",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R S43C",2
"lib2","SARS-CoV-2","CGAATAAGAGTCCAGG",9,40.55,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S41L G86W Y119S P149L K198Y",5
"lib2","SARS-CoV-2","CGAATAAGATTTGGGC",8,90.55,10.04,-0.79,0.06,2.39,1.03,0,">1 nonsynonymous","L5S E10H N58H T85N",4
"lib2","SARS-CoV-2","CGAATAAGCACCCCAC",2,0.24,NA,NA,NA,NA,NA,NA,"stop","F70* V103L Y178K T201L",4
"lib2","SARS-CoV-2","CGAATAAGCCTCCACA",14,90.16,6.86,-3.98,0.37,1.5,1.15,0.02,">1 nonsynonymous","P7Y F47C K87L P96K",4
"lib2","SARS-CoV-2","CGAATAAGTTAAAAAT",4,44.85,10.72,-0.11,0.06,2.97,1.04,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CGAATAAGTTACCACG",3,64.69,7.84,-3,0.18,1.5,1.09,0.01,">1 nonsynonymous","R27L C61T S113V E141R S200L",5
"lib2","SARS-CoV-2","CGAATAATAATCTACC",15,9.12,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1G I104P R179S",3
"lib2","SARS-CoV-2","CGAATAATAGACCAGA",4,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P T85A",2
"lib2","SARS-CoV-2","CGAATAATCAACAAAT",3,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A A22I D90L L95R S113Q F167M",6
"lib2","SARS-CoV-2","CGAATAATCCAGCCTG",12,122.34,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N58F T140N Y165C",3
"lib2","SARS-CoV-2","CGAATAATCGTGGTTT",1,57.45,10.84,0,0.08,2.91,1.11,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","CGAATAATCTGCCACG",2,24.45,10.85,0.01,0.06,3,1.02,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","CGAATAATTGCCACAT",3,35.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F12S Y121V Y159C V173H",4
"lib2","SARS-CoV-2","CGAATACAATCGCATA",7,68.78,10.85,0.01,0.07,2.88,1.13,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","CGAATACACCAACATT",2,60.34,10.27,-0.56,0.04,2.77,1.04,0,">1 nonsynonymous","E10R I138R",2
"lib2","SARS-CoV-2","CGAATACATGCAACTT",2,41.63,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D90E C150G T201D",3
"lib2","SARS-CoV-2","CGAATACCTTGATAAG",11,202.62,6.98,-3.86,0.14,1.73,1.12,0,">1 nonsynonymous","I2S Q144Y C150Y G166A",4
"lib2","SARS-CoV-2","CGAATACCTTTTACAC",4,26.2,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D68E W106C Y119I",3
"lib2","SARS-CoV-2","CGAATACGAGAACAAC",6,0.67,NA,NA,NA,NA,NA,NA,"stop","C61* E141D",2
"lib2","SARS-CoV-2","CGAATACGGAAACGAA",5,12.93,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40I E141A V180A",3
"lib2","SARS-CoV-2","CGAATACGGGCCACGA",6,8.97,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13G S69K I88C",3
"lib2","SARS-CoV-2","CGAATACTAAAATAGG",1,60.61,8.66,-2.18,0.11,2.91,1.08,0,">1 nonsynonymous","C61S N157H",2
"lib2","SARS-CoV-2","CGAATACTCTCAACAG",5,64.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2F V77W Y178S",3
"lib2","SARS-CoV-2","CGAATACTGACACCGT",1,30.85,10.2,-0.63,0.14,2.31,1.05,0.01,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","CGAATAGAAAACTAAT",5,31.82,9.93,-0.91,0.1,2.27,1,0,"1 nonsynonymous","D68H",1
"lib2","SARS-CoV-2","CGAATAGAAGGTCGAA",1,48.59,10.72,-0.12,0.05,2.91,1.1,0,">1 nonsynonymous","E10S K56D",2
"lib2","SARS-CoV-2","CGAATAGACTTAGCTT",3,78.45,7.27,-3.57,0.09,1.79,1.09,0,"1 nonsynonymous","C158M",1
"lib2","SARS-CoV-2","CGAATAGCTACGTTGT",2,36.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16T G86P",2
"lib2","SARS-CoV-2","CGAATAGGTGTCAGGT",1,23.68,7.2,-3.64,0.43,1.5,1.05,0.05,">1 nonsynonymous","F44M D68L",2
"lib2","SARS-CoV-2","CGAATAGTACATAAGC",10,198.15,10.5,-0.34,0.05,2.9,1.06,0,">1 nonsynonymous","T15G T201K",2
"lib2","SARS-CoV-2","CGAATAGTCACCAAAA",2,20.22,9.99,-0.85,0.09,2.61,1.06,0,">1 nonsynonymous","F8T Q163M",2
"lib2","SARS-CoV-2","CGAATATAAAACTCAC",3,22.2,8.22,-2.62,0.14,2.77,1.09,0.01,">1 nonsynonymous","V37M C61T S113F",3
"lib2","SARS-CoV-2","CGAATATACACACACA",4,59.41,10.43,-0.41,0.06,2.94,1.03,0,">1 nonsynonymous","K56Q G174D",2
"lib2","SARS-CoV-2","CGAATATACTGCACTG",2,14.02,6.02,-4.82,1.47,3,1.04,0,">1 nonsynonymous","A42S I72S F99P G152M Y178E C195A",6
"lib2","SARS-CoV-2","CGAATATATGAACTTC",10,94.33,6,-4.84,0.87,1.5,1.14,0.01,">1 nonsynonymous","T3W N130S Y143H L162C Y175R",5
"lib2","SARS-CoV-2","CGAATATATTAATTTT",14,155.93,8.16,-2.68,0.16,1.8,1.11,0.01,">1 nonsynonymous","G9K A33R K114R G155P",4
"lib2","SARS-CoV-2","CGAATATCAGCATAAC",5,20.37,6.89,-3.95,0.36,1.5,1.04,0.03,">1 nonsynonymous","C49N R124S",2
"lib2","SARS-CoV-2","CGAATATGCATCAGTC",13,104.35,8.44,-2.4,0.12,2.21,1.11,0.01,">1 nonsynonymous","L131M G146R",2
"lib2","SARS-CoV-2","CGAATATGGAGGCATA",1,25.93,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N40V C102Q F126E E141R",4
"lib2","SARS-CoV-2","CGAATATGTTTAGCTA",3,7.23,10.96,0.12,0.13,2.86,1.15,0.01,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","CGAATCAAAACTAATA",4,96.96,9.64,-1.19,0.09,1.92,1.02,0,">1 nonsynonymous","F17S N151M",2
"lib2","SARS-CoV-2","CGAATCAAATTTCACA",4,31.73,10.74,-0.09,0.05,2.93,1.06,0,">1 nonsynonymous","F44W T85A",2
"lib2","SARS-CoV-2","CGAATCAACATAATTA",3,43.5,10.92,0.09,0.05,2.93,1.07,0,"1 nonsynonymous","T3M",1
"lib2","SARS-CoV-2","CGAATCAACCCCTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","I88* R124W C150D Q176A",4
"lib2","SARS-CoV-2","CGAATCAATACTGGAA",2,10.97,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D59P N107S Y123I S129Y",4
"lib2","SARS-CoV-2","CGAATCACACCTTATC",20,237.41,10.69,-0.15,0.03,2.96,1.06,0,">1 nonsynonymous","D59G V194A T201E",3
"lib2","SARS-CoV-2","CGAATCAGCTATAACC",11,72.58,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11N D90A F126S",3
"lib2","SARS-CoV-2","CGAATCAGGAATGCCA",4,21.34,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G101P T148K Q168V T201W",4
"lib2","SARS-CoV-2","CGAATCCACTTGTAGT",9,57.24,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S113L F134P G155F S164L S200L",5
"lib2","SARS-CoV-2","CGAATCCAGTTAAGGT",5,55.47,10.84,0.01,0.06,2.92,1.09,0,"1 nonsynonymous","A42Q",1
"lib2","SARS-CoV-2","CGAATCCCAATGTTGC",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21G S113E N120S",3
"lib2","SARS-CoV-2","CGAATCCCATGCAGAT",2,28.44,9.71,-1.12,0.11,2.05,1,0.01,">1 nonsynonymous","S45P I104S L122H",3
"lib2","SARS-CoV-2","CGAATCCGAGAATAAC",11,85.61,9.89,-0.95,0.06,2.25,1.05,0,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","CGAATCCTAATGGTCC",2,0.84,NA,NA,NA,NA,NA,NA,"stop","N64* Y93S R136C P149R Q163M K198A",6
"lib2","SARS-CoV-2","CGAATCCTCAATTATA",16,248.43,10.84,0,0.04,2.91,1.09,0,"1 nonsynonymous","T100R",1
"lib2","SARS-CoV-2","CGAATCCTTCGCTTAT",10,122.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A18R N58I Y91I Y178V",4
"lib2","SARS-CoV-2","CGAATCGCTCTCACTG",7,70.42,7.19,-3.65,0.25,1.5,1.12,0.01,">1 nonsynonymous","C6W Q144F",2
"lib2","SARS-CoV-2","CGAATCGTCTATACGG",9,4.04,NA,NA,NA,NA,NA,NA,"stop","T100* N107V",2
"lib2","SARS-CoV-2","CGAATCGTTGCTTAAT",2,46.33,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","C6F V103F T170L",3
"lib2","SARS-CoV-2","CGAATCTAGCAACAAT",10,117,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S45I G51R F99I L187H",4
"lib2","SARS-CoV-2","CGAATCTAGGTGGCAG",2,46.1,8.1,-2.73,0.19,1.97,1.03,0.01,">1 nonsynonymous","S113L N120M",2
"lib2","SARS-CoV-2","CGAATCTCCGAGACAA",10,103.75,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8S L60G G86I V115Q",4
"lib2","SARS-CoV-2","CGAATCTCTTCCATTC",3,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31A A89W",2
"lib2","SARS-CoV-2","CGAATCTTTCCACAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44Y I142D F156S Q163*",4
"lib2","SARS-CoV-2","CGAATGAAAATTAGAG",6,92.27,10.74,-0.1,0.06,2.82,1.14,0,">1 nonsynonymous","N4A T100Y G146S",3
"lib2","SARS-CoV-2","CGAATGAAACTTATAC",2,31.43,9.88,-0.95,0.07,2.16,1.07,0,">1 nonsynonymous","R127N K198Q",2
"lib2","SARS-CoV-2","CGAATGAACAGAGTAG",9,31.02,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42K I88S I138F",3
"lib2","SARS-CoV-2","CGAATGAACTCAGTTT",7,68.41,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T85M W106K K114Y C158L",4
"lib2","SARS-CoV-2","CGAATGAATGTCAAAG",2,9.85,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","S45C R124Q P133S S139V",4
"lib2","SARS-CoV-2","CGAATGACGGTCTACA",2,20.6,10.75,-0.08,0.1,2.88,1.15,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGAATGAGATATTCTG",5,1.03,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","CGAATGAGGACCGAAA",8,86.86,10.7,-0.14,0.03,3,1,0,">1 nonsynonymous","S36F N64T K198S",3
"lib2","SARS-CoV-2","CGAATGATAGTTATTA",1,45.53,9.12,-1.72,0.15,1.87,1.11,0.01,">1 nonsynonymous","A14I F160G Y178W",3
"lib2","SARS-CoV-2","CGAATGATGAACTCAC",2,19.79,10.8,-0.03,0.07,2.98,1.08,0,">1 nonsynonymous","L5V Y91F T100L",3
"lib2","SARS-CoV-2","CGAATGCACTGAAACG",6,62.75,9.81,-1.03,0.08,2.52,1.02,0,">1 nonsynonymous","F12A K87H T148Q",3
"lib2","SARS-CoV-2","CGAATGCATTTTCCTC",3,62.76,9.44,-1.39,0.13,1.5,1.05,0.01,"1 nonsynonymous","Y50E",1
"lib2","SARS-CoV-2","CGAATGCCGAGTTGCT",5,74.8,6.27,-4.57,0.67,1.5,1.21,0.02,">1 nonsynonymous","D90N A105F S139R Y178I",4
"lib2","SARS-CoV-2","CGAATGCTTGCCTACC",5,34.17,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G9L S19M F99T",3
"lib2","SARS-CoV-2","CGAATGGAAGGGCTAC",14,102.54,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36P S139F Q144L S164L",4
"lib2","SARS-CoV-2","CGAATGGGCTATTAGA",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V S53F D68V I138A P161C",5
"lib2","SARS-CoV-2","CGAATGGGTAATTAAC",4,88.64,10.21,-0.63,0.04,2.88,1.04,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","CGAATGGGTCAATAAT",3,69.89,10.86,0.03,0.05,2.86,1.15,0,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","CGAATGTAAAAGGACG",1,30.99,8.83,-2,0.07,2.88,1.11,0,">1 nonsynonymous","P7R K114T N120P",3
"lib2","SARS-CoV-2","CGAATGTAATGTATAC",3,9.84,6.64,-4.2,0.39,1.5,1.11,0.03,">1 nonsynonymous","N13I S43K C61S R127G",4
"lib2","SARS-CoV-2","CGAATGTATGAATAAT",10,150,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","N4I Y35W K87G Y93P A105T V153E L183Y",7
"lib2","SARS-CoV-2","CGAATGTCAGAAGGTG",9,14.53,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","F70T Q84N K94L S200R",4
"lib2","SARS-CoV-2","CGAATGTTAGGGACAA",3,22.72,10.77,-0.07,0.08,2.84,1.13,0,">1 nonsynonymous","N4Y T148E V173K",3
"lib2","SARS-CoV-2","CGAATTAAACATTTAT",10,8.1,NA,NA,NA,NA,NA,NA,"stop","S19T P82* P197Q",3
"lib2","SARS-CoV-2","CGAATTAACACCAGGG",1,24.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","D98L C158N",2
"lib2","SARS-CoV-2","CGAATTAACTCATTAT",2,10.32,10.57,-0.27,0.08,3,1,0,"1 nonsynonymous","G152M",1
"lib2","SARS-CoV-2","CGAATTAAGATTCGAA",8,124.52,8.38,-2.45,0.15,1.88,1.09,0.01,">1 nonsynonymous","I80M Y119M I138T",3
"lib2","SARS-CoV-2","CGAATTAATTATCCAC",3,546.28,10.83,-0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAATTACAAATTCCA",3,78.03,9.71,-1.12,0.11,2.71,1.14,0.01,">1 nonsynonymous","S41N Y121P",2
"lib2","SARS-CoV-2","CGAATTACACGACGGG",9,547.62,9.65,-1.18,0.04,2.78,1.06,0,">1 nonsynonymous","L5R S41T Q176H",3
"lib2","SARS-CoV-2","CGAATTAGATCTGCAA",7,194.57,10.82,-0.02,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAATTATATCGACTA",12,84.64,8.47,-2.37,0.16,1.5,1.06,0.01,">1 nonsynonymous","K87V G101A",2
"lib2","SARS-CoV-2","CGAATTATTCAATATG",5,29.78,7.25,-3.59,0.58,1.5,1.14,0.07,">1 nonsynonymous","L95S K199G",2
"lib2","SARS-CoV-2","CGAATTCAAGGCCAGG",11,135.61,8.19,-2.64,0.14,2.12,1.05,0.01,">1 nonsynonymous","T100V Y165E",2
"lib2","SARS-CoV-2","CGAATTCAAGTTCAAT",1,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S P96L C158P",3
"lib2","SARS-CoV-2","CGAATTCTTAACATGT",7,44.57,6.77,-4.07,0.36,1.5,1.17,0.02,">1 nonsynonymous","Y21C A89S V103I S200I",4
"lib2","SARS-CoV-2","CGAATTGACGAAGAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N58* D98W F167R",3
"lib2","SARS-CoV-2","CGAATTGACTAACATG",5,56.54,10.86,0.02,0.07,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAATTGGAGCCCGTG",10,236.85,10.38,-0.46,0.03,2.91,1.08,0,">1 nonsynonymous","L5H C61L K87I",3
"lib2","SARS-CoV-2","CGAATTGTGAAAATTG",3,93.16,10.8,-0.03,0.04,2.92,1.09,0,">1 nonsynonymous","V32Y T148Q",2
"lib2","SARS-CoV-2","CGAATTGTTAATCATA",4,43.35,9,-1.83,0.09,2.06,1.04,0,">1 nonsynonymous","A14S N107R G155S",3
"lib2","SARS-CoV-2","CGAATTGTTGTTTTGA",6,0.45,NA,NA,NA,NA,NA,NA,"stop","S147F Q163*",2
"lib2","SARS-CoV-2","CGAATTTAATAAAACT",2,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E I80W Y175I",3
"lib2","SARS-CoV-2","CGAATTTAATACGACG",3,23.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N92K G101T T201M",3
"lib2","SARS-CoV-2","CGAATTTACAACTTAA",6,161.24,10.81,-0.02,0.04,2.98,1.04,0,"1 nonsynonymous","T55W",1
"lib2","SARS-CoV-2","CGAATTTACTTGTCGT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","CGAATTTGGACAAGAG",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R T15R F44L D98F G166T",5
"lib2","SARS-CoV-2","CGAATTTGTATGCTAG",2,40.68,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C6S E76S F99C K114Q Y121L",5
"lib2","SARS-CoV-2","CGAATTTGTTTATATA",5,0,NA,NA,NA,NA,NA,NA,"stop","S19E K56* N157Q",3
"lib2","SARS-CoV-2","CGAATTTTAAAATGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H I88K",2
"lib2","SARS-CoV-2","CGAATTTTATCCATTA",3,25.75,6,-4.84,2,3,1.28,0.04,">1 nonsynonymous","V52I A89M Y121E R127D I142S",5
"lib2","SARS-CoV-2","CGAATTTTCTGACGGA",9,159.93,10.24,-0.6,0.05,2.77,1,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","CGACAAAAAACAAATG",3,22.67,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50L E141I",2
"lib2","SARS-CoV-2","CGACAAAAAGCATCAA",6,140.44,10.5,-0.33,0.03,2.91,1.08,0,"1 nonsynonymous","Y178C",1
"lib2","SARS-CoV-2","CGACAAAAAGTACCGT",4,158.98,10.16,-0.68,0.08,2.54,1.01,0,">1 nonsynonymous","D59W P96S",2
"lib2","SARS-CoV-2","CGACAAAATATATAAA",3,22.79,6,-4.84,1.86,1.5,1.11,0.04,">1 nonsynonymous","Y35V T85Y P96V N118G",4
"lib2","SARS-CoV-2","CGACAAACATGTCCCG",12,55.35,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S41G G86M G101D G116L T170M",5
"lib2","SARS-CoV-2","CGACAAACCCATCCAT",3,17.08,10.88,0.04,0.07,2.9,1.09,0,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","CGACAAACTTCGACAA",1,4.18,NA,NA,NA,NA,NA,NA,"stop","T55V Y121S N157*",3
"lib2","SARS-CoV-2","CGACAAAGCAGTCGCG",2,18.69,6,-4.84,2,1.5,1.03,0.06,">1 nonsynonymous","R127T R136N P149H N157Y",4
"lib2","SARS-CoV-2","CGACAAAGTGAAAGCT",23,184.6,7.73,-3.1,0.11,1.5,1.13,0,">1 nonsynonymous","N4A R25S G146N",3
"lib2","SARS-CoV-2","CGACAAAGTTGACTAG",2,68.79,9.74,-1.1,0.08,1.9,1,0,"1 nonsynonymous","F12R",1
"lib2","SARS-CoV-2","CGACAAATACTTAATA",5,35.67,6.87,-3.97,0.31,1.5,1.09,0.02,">1 nonsynonymous","A14C N107L",2
"lib2","SARS-CoV-2","CGACAAATCATGTCCT",2,32.24,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D97V Q176P S184G",3
"lib2","SARS-CoV-2","CGACAAATGCTCGCAT",2,37.93,10.23,-0.61,0.04,2.98,1.02,0,">1 nonsynonymous","G152I K198S",2
"lib2","SARS-CoV-2","CGACAAATTACGTTAA",11,139.92,9.96,-0.87,0.05,2.49,1.07,0,">1 nonsynonymous","G83C S184D",2
"lib2","SARS-CoV-2","CGACAACAAATTGATT",1,13.55,8.64,-2.2,0.12,2,1.05,0.01,">1 nonsynonymous","N58F Y66F Y121S",3
"lib2","SARS-CoV-2","CGACAACAACTCCTAT",5,93.5,10.52,-0.31,0.04,2.93,1.07,0,">1 nonsynonymous","L5Q Y39T T46V Q144R",4
"lib2","SARS-CoV-2","CGACAACACCCCAGTG",8,5.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L T15H A81Y Y121Q T140N",5
"lib2","SARS-CoV-2","CGACAACCAGAGTAAT",1,15.72,6,-4.84,2,2.13,1.21,0.01,">1 nonsynonymous","N92D N107R S139G F185I",4
"lib2","SARS-CoV-2","CGACAACGCGCAGGTG",1,6.15,11.1,0.27,0.13,2.94,1.07,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","CGACAACGTCAGGTAA",4,47.33,8.14,-2.69,0.33,1.5,1.03,0.04,">1 nonsynonymous","S129A Y165G",2
"lib2","SARS-CoV-2","CGACAACTAGAATTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12N D90* N120W",3
"lib2","SARS-CoV-2","CGACAAGACCTATTCT",6,30.82,10.37,-0.47,0.14,2.82,1.07,0.01,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","CGACAAGCAGCTATAA",3,70.32,10.89,0.05,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACAAGTACATATAG",6,43.37,6.57,-4.27,0.42,1.5,1.14,0.02,">1 nonsynonymous","A14S V37R V77P D90Q D98G R127H F160V Y178S",8
"lib2","SARS-CoV-2","CGACAATAAAATCGAA",10,73.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5F C49N G155E P177V",4
"lib2","SARS-CoV-2","CGACAATAAACGCGAA",3,63.22,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S45F I88S",2
"lib2","SARS-CoV-2","CGACAATCAGTGACGA",3,39.11,10.09,-0.74,0.07,2.8,1,0,">1 nonsynonymous","L57P C61F V153I T201M",4
"lib2","SARS-CoV-2","CGACAATCGAACTAAC",1,29.05,8.72,-2.12,0.15,1.53,1.13,0.01,">1 nonsynonymous","A105I N120V E141A",3
"lib2","SARS-CoV-2","CGACAATCTCCCAACC",2,111.26,10.75,-0.09,0.05,2.94,1.08,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","CGACAATCTGACAGAG",7,2.6,NA,NA,NA,NA,NA,NA,"stop","S41E G51V F62L L122R K128* T170S",6
"lib2","SARS-CoV-2","CGACAATTCACCGAAA",9,133.85,10.78,-0.06,0.05,2.95,1.03,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","CGACAATTTACCCACT",1,9.1,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F12S S43F T63G G83V K94D G117T",6
"lib2","SARS-CoV-2","CGACACAAAACACTAC",11,198.88,10.23,-0.61,0.04,2.82,1.05,0,">1 nonsynonymous","D34K P54V T148D V173L",4
"lib2","SARS-CoV-2","CGACACAAGCCCCAGG",18,314.73,10.85,0.01,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACACATAAACCATA",2,6.54,9.46,-1.38,0.14,3,1.06,0,">1 nonsynonymous","Y119S N130L",2
"lib2","SARS-CoV-2","CGACACATATCAATCA",12,28.93,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","A81T N92E F99S Q168F",4
"lib2","SARS-CoV-2","CGACACATATCCCGAG",1,20.34,6.14,-4.7,0.85,1.5,1.09,0.03,">1 nonsynonymous","G9L D90I T100Q C158I",4
"lib2","SARS-CoV-2","CGACACCCCCTTGAAA",6,106.97,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D59V I72L P161L G174E",4
"lib2","SARS-CoV-2","CGACACCCGAAACTAC",5,40.63,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38P D59R D90S D97N G146Q",5
"lib2","SARS-CoV-2","CGACACCCGCACGCCA",4,0.54,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","CGACACCGACATAAAG",2,8.12,9.65,-1.18,0.27,1.5,1.36,0.04,">1 nonsynonymous","A42R Y91D N110T",3
"lib2","SARS-CoV-2","CGACACGACTTTATGC",5,51.59,NA,NA,NA,NA,NA,NA,"stop","F47*",1
"lib2","SARS-CoV-2","CGACACGCTACTGTAA",2,81.55,10.14,-0.7,0.06,2.9,1.03,0,">1 nonsynonymous","C6G K114R",2
"lib2","SARS-CoV-2","CGACACGGATCTCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* E76T A81V P149N",4
"lib2","SARS-CoV-2","CGACACGTAAGGCCCC",1,41.26,6.37,-4.46,0.75,1.5,1.05,0.05,">1 nonsynonymous","R27G C61I G101Y Y143I",4
"lib2","SARS-CoV-2","CGACACTACTTGCAGC",1,14.49,10.2,-0.64,0.11,2.35,1,0.01,">1 nonsynonymous","N1I S43Y P96N",3
"lib2","SARS-CoV-2","CGACACTAGATGTGGA",1,12.92,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G51S F99S T170L",3
"lib2","SARS-CoV-2","CGACACTAGGACGTGC",9,191.96,8.68,-2.15,0.04,2.76,1.06,0,">1 nonsynonymous","D90W Y119W",2
"lib2","SARS-CoV-2","CGACACTAGTAAATCC",1,15.09,10.59,-0.25,0.08,2.78,1.13,0,">1 nonsynonymous","V37L Y178Q",2
"lib2","SARS-CoV-2","CGACACTATAAAAAGT",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q D34I N58I T63A V103T A190N",6
"lib2","SARS-CoV-2","CGACACTCCTGGTACG",5,182.53,10.11,-0.73,0.06,2.68,1.02,0,">1 nonsynonymous","A14T G51R I138C",3
"lib2","SARS-CoV-2","CGACACTTACTAATAT",1,21.23,6,-4.84,1.08,1.5,1.13,0.01,">1 nonsynonymous","T85K Y119V D137Y",3
"lib2","SARS-CoV-2","CGACAGAAATCCAATG",4,15.95,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N1I F8N K26G V37I S139G",5
"lib2","SARS-CoV-2","CGACAGACAGCTCACC",4,48.11,10.73,-0.11,0.07,2.84,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACAGACCCTTACTA",4,2.22,NA,NA,NA,NA,NA,NA,"stop","V20G T140*",2
"lib2","SARS-CoV-2","CGACAGCCATTAAGGA",1,25.17,10.55,-0.28,0.08,2.99,1,0,">1 nonsynonymous","E10S S29R A192T",3
"lib2","SARS-CoV-2","CGACAGCCCATGATTT",7,59.54,8.01,-2.83,0.21,1.5,1.11,0.02,">1 nonsynonymous","F44S L60R D98F",3
"lib2","SARS-CoV-2","CGACAGCCTCTTAACA",3,18.68,7.68,-3.16,0.25,1.5,1.1,0.03,">1 nonsynonymous","C61L A89S S139F P149E",4
"lib2","SARS-CoV-2","CGACAGGAAACAAAAA",9,151.97,10.84,0.01,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACAGGGACAAAATA",6,45.19,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G86K T170E R179F",3
"lib2","SARS-CoV-2","CGACAGGGACAACTGG",2,0.36,NA,NA,NA,NA,NA,NA,"stop","E10F A89R Q176*",3
"lib2","SARS-CoV-2","CGACAGGTAAACGGAT",14,70.35,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","G83P D90T N118H P169E",4
"lib2","SARS-CoV-2","CGACAGGTTTAGCGCC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","W23L D112Y N120M P133* T148D",5
"lib2","SARS-CoV-2","CGACAGTGACCAAGGC",8,106.85,10.75,-0.09,0.06,2.94,1.09,0,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","CGACAGTGGTTTAAAT",5,9.71,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","D97E F99L I104Q",3
"lib2","SARS-CoV-2","CGACAGTTACCAAACA",3,39.31,9.35,-1.49,0.3,1.68,1.06,0.05,">1 nonsynonymous","C61N Y119S P133V A145V",4
"lib2","SARS-CoV-2","CGACATAACACGGAGT",1,6.25,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","P7V C61S K87C T100L V103H",5
"lib2","SARS-CoV-2","CGACATAAGCAATACA",1,35.45,10.66,-0.17,0.05,2.95,1.07,0,">1 nonsynonymous","D98T K114H",2
"lib2","SARS-CoV-2","CGACATAATATGCGAC",6,4.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95K",1
"lib2","SARS-CoV-2","CGACATAATCAACTAG",1,13.04,9.86,-0.97,0.25,1.95,1.01,0.04,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","CGACATAATCACCAAC",1,5.93,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","Y50N D68H",2
"lib2","SARS-CoV-2","CGACATAATCTCAGCT",6,48.95,10.25,-0.58,0.06,2.86,1.05,0,">1 nonsynonymous","L60T G152T K199Q",3
"lib2","SARS-CoV-2","CGACATACAATCAAAC",13,89.15,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","R27M L60G A89N G117S L125H Y143L K198T",7
"lib2","SARS-CoV-2","CGACATAGCTGAAGAT",11,74.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F70C V153S",2
"lib2","SARS-CoV-2","CGACATATACGTTACC",2,10.22,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","C6T L60A D112P T201G",4
"lib2","SARS-CoV-2","CGACATATATCTTCAG",7,101.35,6,-4.84,0.81,1.5,1.13,0.01,">1 nonsynonymous","D112Y R179M",2
"lib2","SARS-CoV-2","CGACATATCTTACTTA",4,14.52,7.06,-3.77,0.2,1.5,1,0.01,">1 nonsynonymous","G86R F160S",2
"lib2","SARS-CoV-2","CGACATATGCCCTCAA",5,0,NA,NA,NA,NA,NA,NA,"stop","K56S A105* E154D",3
"lib2","SARS-CoV-2","CGACATATTATTAGGT",7,32.65,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","C61T G74L Q84A N92A P149C",5
"lib2","SARS-CoV-2","CGACATCCAAGCAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T C61V V115M F134G",4
"lib2","SARS-CoV-2","CGACATCCCAATTACT",3,27.2,9.75,-1.09,0.12,2.06,1.02,0.01,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","CGACATCGATAGGATG",6,124.52,10.75,-0.08,0.03,2.88,1.14,0,">1 nonsynonymous","C61R N130T",2
"lib2","SARS-CoV-2","CGACATGAAGACAAAT",17,124.97,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T15L T46C G117R E154Y Q168S P177S",6
"lib2","SARS-CoV-2","CGACATGAATGCAACA",4,35.4,10.79,-0.05,0.06,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACATGCGAATATAA",7,48.69,6,-4.84,1.16,3,1.14,0,">1 nonsynonymous","V37M K48D S69P K94A N110S K128M",6
"lib2","SARS-CoV-2","CGACATGCGCGATTGG",9,133.67,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9W A81H D90G G117S",4
"lib2","SARS-CoV-2","CGACATGCTCCGGCAA",5,17.26,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L5S C49S G86D A89T R127V",5
"lib2","SARS-CoV-2","CGACATTAAAAAAAGA",1,32.23,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","F12S K48L N92G",3
"lib2","SARS-CoV-2","CGACATTAACTTGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4I R78A A81W N107C I138H V173*",6
"lib2","SARS-CoV-2","CGACATTAATAGATTA",8,20.96,10.83,-0.01,0.08,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACATTACAACACGG",3,48.47,10.41,-0.42,0.08,2.79,1.05,0,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","CGACATTATCATTATT",1,48.01,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N4R A81N G86V",3
"lib2","SARS-CoV-2","CGACATTCAACAGCAG",19,84.31,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T85K A105P T148W",3
"lib2","SARS-CoV-2","CGACATTTAAACCTAT",17,152.08,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A14N Y39C P133R C150I",4
"lib2","SARS-CoV-2","CGACATTTAATGCCAT",4,20.95,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N4I T46C G51V L57S N157L",5
"lib2","SARS-CoV-2","CGACATTTATCTGTAC",14,164,10.71,-0.13,0.02,2.98,1.04,0,">1 nonsynonymous","N1V V37K C61S",3
"lib2","SARS-CoV-2","CGACATTTTTTAGGGT",6,36.48,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G86H A145F",2
"lib2","SARS-CoV-2","CGACCAAAGAGTGCCA",5,151.14,10.79,-0.04,0.03,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACCAAAGCCCATTG",11,121.6,10.71,-0.13,0.04,2.91,1.09,0,">1 nonsynonymous","A14N V32Y S45D",3
"lib2","SARS-CoV-2","CGACCAACTCTGGTTT",7,92.84,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y121D L131K Y175V",3
"lib2","SARS-CoV-2","CGACCAAGTGCGATCG",7,24.45,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F99R C158R",2
"lib2","SARS-CoV-2","CGACCACAACAAAATA",1,11.2,6.12,-4.72,1,3,1.24,0.02,">1 nonsynonymous","A67S V77P L95R K128P",4
"lib2","SARS-CoV-2","CGACCACAATCTTATA",7,107.89,10.16,-0.68,0.04,2.86,1.07,0,">1 nonsynonymous","I2T C6I",2
"lib2","SARS-CoV-2","CGACCACAATGGTCGC",7,24.37,6,-4.84,1.83,1.5,1.07,0,">1 nonsynonymous","F17I V77M Y143V",3
"lib2","SARS-CoV-2","CGACCACAATTATCAC",7,127.18,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N1G E141T Y165Q P177S S184T",5
"lib2","SARS-CoV-2","CGACCACATCATCAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","C102L G116* F156K",3
"lib2","SARS-CoV-2","CGACCACCTATTCGAG",11,64.55,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C49F K128N F134H E141V C150L",5
"lib2","SARS-CoV-2","CGACCACGAACCGGTT",5,24.75,6,-4.84,1.82,2.33,1.35,0.01,">1 nonsynonymous","V11L S45R E76I P149N",4
"lib2","SARS-CoV-2","CGACCACGGAAAGTAT",9,154.91,10.81,-0.03,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACCACTAAGGAGAT",1,30.88,10.28,-0.55,0.05,3,1.01,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","CGACCACTGCGATGTG",6,49.2,10.84,0,0.07,2.98,1.05,0,">1 nonsynonymous","S36K F160Y",2
"lib2","SARS-CoV-2","CGACCAGCTCCCACTT",3,37.52,9.3,-1.53,0.06,2.78,1.09,0,">1 nonsynonymous","V52M N118C L125I",3
"lib2","SARS-CoV-2","CGACCAGTAAATAATG",2,15.94,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","N4W G9D P96L T170D S184C",5
"lib2","SARS-CoV-2","CGACCATACGTCGACT",24,175.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S69M D90G Y121S E141Y Q168V",5
"lib2","SARS-CoV-2","CGACCATCCGGATATT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","L5V I28W S69* Y175* K199I",5
"lib2","SARS-CoV-2","CGACCATCTTGATCTT",6,122.44,8.79,-2.04,0.1,2.77,1.12,0,">1 nonsynonymous","A105M F156T",2
"lib2","SARS-CoV-2","CGACCATGGGAGTGAA",6,129.69,10.92,0.09,0.07,2.93,1.08,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","CGACCATTAATTAGAC",13,105.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2Y A81D Y165S",3
"lib2","SARS-CoV-2","CGACCATTCTAAGCCA",18,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99H R124N V182D",3
"lib2","SARS-CoV-2","CGACCATTTCCAAAAC",1,5.51,7.94,-2.9,0.33,1.83,1,0.03,">1 nonsynonymous","N107S N118P",2
"lib2","SARS-CoV-2","CGACCCAACCGACTAA",1,23.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K R127N Y165R",3
"lib2","SARS-CoV-2","CGACCCAAGCCATTGC",2,5.4,9.69,-1.15,0.33,2.12,1,0.01,">1 nonsynonymous","V65K G152T",2
"lib2","SARS-CoV-2","CGACCCACCCATTGAC",4,11.9,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N4H G86T C102D Y165L",4
"lib2","SARS-CoV-2","CGACCCAGACCACAGA",8,134.62,10.15,-0.69,0.05,2.83,1.05,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","CGACCCAGGGGGGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T100H I104* G152D N157M",4
"lib2","SARS-CoV-2","CGACCCATAATAAGTA",1,2.48,NA,NA,NA,NA,NA,NA,"stop","N30* F167W",2
"lib2","SARS-CoV-2","CGACCCATCAAACTGA",8,128.03,10.14,-0.69,0.06,2.55,1.03,0,">1 nonsynonymous","Q84M W106S",2
"lib2","SARS-CoV-2","CGACCCATCAAATTAC",2,61.73,10.34,-0.49,0.05,2.86,1,0,">1 nonsynonymous","S43N S45L S129A",3
"lib2","SARS-CoV-2","CGACCCATTCCTACCA",5,129.34,10.8,-0.03,0.04,2.95,1.07,0,"1 nonsynonymous","T3Q",1
"lib2","SARS-CoV-2","CGACCCCCCCATATGT",2,106.71,10.54,-0.3,0.04,2.9,1.07,0,">1 nonsynonymous","A14V D90M L122K",3
"lib2","SARS-CoV-2","CGACCCCCCCCGAGCA",3,28.05,8.13,-2.71,0.15,2.14,1.14,0.02,">1 nonsynonymous","G74D A192S",2
"lib2","SARS-CoV-2","CGACCCCCGAACTCCA",1,91.95,9.88,-0.96,0.04,2.95,1.05,0,">1 nonsynonymous","D98M F156S",2
"lib2","SARS-CoV-2","CGACCCCGAGCTGAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44N C49N V77Q G83S L188R P197K",6
"lib2","SARS-CoV-2","CGACCCGCCCAGAAGT",7,3.47,NA,NA,NA,NA,NA,NA,"stop","E10S C31Y Y50*",3
"lib2","SARS-CoV-2","CGACCCGTCTATACAC",3,22.51,10.9,0.06,0.09,2.88,1.09,0,">1 nonsynonymous","P149G V153L",2
"lib2","SARS-CoV-2","CGACCCGTGCGAATAG",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101R K114P Y143I G152N N171M S200T",6
"lib2","SARS-CoV-2","CGACCCTCAAGTACTG",1,8.95,10.36,-0.47,0.47,2.88,1,0.03,">1 nonsynonymous","F156E T201S",2
"lib2","SARS-CoV-2","CGACCCTCCTTATCAA",1,10.14,9.27,-1.57,0.03,3,1,0,"1 nonsynonymous","E154Y",1
"lib2","SARS-CoV-2","CGACCCTTTGCACTTG",6,21.3,10.8,-0.04,0.06,2.98,1.03,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","CGACCGAAATTAAGAC",4,57.04,10.19,-0.64,0.06,2.92,1,0,">1 nonsynonymous","T3M E10L K26T D98N E154D",5
"lib2","SARS-CoV-2","CGACCGAGGCTGGTTG",5,65.63,6.43,-4.41,0.38,1.5,1.17,0.01,">1 nonsynonymous","Y21K S29G F62Y S139T",4
"lib2","SARS-CoV-2","CGACCGATTAATGTGG",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F N64T",2
"lib2","SARS-CoV-2","CGACCGCTAGTATTTG",1,6.01,10.49,-0.34,0.27,2.64,1,0.03,">1 nonsynonymous","N64R K87I K128I G152D",4
"lib2","SARS-CoV-2","CGACCGGCTTACAGGG",5,13.7,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","N13V N120Y F134T L188A",4
"lib2","SARS-CoV-2","CGACCGTCTAACATGG",4,39.78,8.39,-2.44,0.06,2.36,1.06,0,">1 nonsynonymous","Y119F K128R F167Y",3
"lib2","SARS-CoV-2","CGACCGTCTTATGAGC",1,3.08,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGACCGTTCCCCGGAC",8,0.03,NA,NA,NA,NA,NA,NA,"stop","V20L R27N G83* P149C Q168P",5
"lib2","SARS-CoV-2","CGACCGTTGATCTCTA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","T15L S53* G146L",3
"lib2","SARS-CoV-2","CGACCTAAAAAAACCA",4,30.83,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D59Q Y93I F99I C150E K199D",5
"lib2","SARS-CoV-2","CGACCTAAAATTGAAT",4,20.29,9.83,-1.01,0.12,1.99,1.13,0.01,">1 nonsynonymous","F47Q T55V L187T",3
"lib2","SARS-CoV-2","CGACCTAAACTGATTA",15,108.49,8.01,-2.83,0.11,1.84,1.11,0,">1 nonsynonymous","C61S A81C N171R",3
"lib2","SARS-CoV-2","CGACCTAACGTTGCGG",4,155.26,9.21,-1.63,0.04,2.64,1.07,0,">1 nonsynonymous","V37T P161T",2
"lib2","SARS-CoV-2","CGACCTAGATGAACTA",10,2.08,NA,NA,NA,NA,NA,NA,"stop","Q84* L162A",2
"lib2","SARS-CoV-2","CGACCTATAAGAAATA",1,18.89,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A33S I104W Y119C E154V T170I Y175C",6
"lib2","SARS-CoV-2","CGACCTATGCGCGTAG",4,37.51,7.09,-3.74,0.26,1.5,1.02,0.02,">1 nonsynonymous","S113K N118K P149S",3
"lib2","SARS-CoV-2","CGACCTCCAACCAAGG",4,1.41,NA,NA,NA,NA,NA,NA,"stop","Y35I D59L G83F F156V Y175*",5
"lib2","SARS-CoV-2","CGACCTCCAAGGCCCT",2,1.27,NA,NA,NA,NA,NA,NA,"stop","A81T A89N Q144* P149L",4
"lib2","SARS-CoV-2","CGACCTCGAAGCGCAA",4,87.54,10.86,0.02,0.05,2.92,1.1,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","CGACCTCGTCGCTTGT",5,19.79,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","C6Y C49N Y91K",3
"lib2","SARS-CoV-2","CGACCTCTGCGGAGAA",3,44.54,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","I72A G86I I142F",3
"lib2","SARS-CoV-2","CGACCTGCAATAGACC",6,9.57,7.89,-2.95,0.53,1.5,1.13,0.08,">1 nonsynonymous","Q84H Y91V F134Q T201R",4
"lib2","SARS-CoV-2","CGACCTGGATAAACTG",8,23.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T85N P96V P169A",3
"lib2","SARS-CoV-2","CGACCTGTGCGGGCCT",1,13.67,7.44,-3.4,0.27,1.91,1.04,0.02,">1 nonsynonymous","D112N A192S T201S",3
"lib2","SARS-CoV-2","CGACCTTCCGTCCATA",2,45.15,10.53,-0.3,0.05,3,1.03,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","CGACCTTGAAGGGGCG",7,4.2,NA,NA,NA,NA,NA,NA,"stop","T63* C102A S129R T148V Y159D",5
"lib2","SARS-CoV-2","CGACCTTGCAAACCCT",14,206.63,10.05,-0.78,0.05,2.59,1.02,0,">1 nonsynonymous","A14Y D59E N130I",3
"lib2","SARS-CoV-2","CGACCTTGGTATCGGA",1,34.47,10.5,-0.34,0.06,2.94,1.04,0,"1 nonsynonymous","P169N",1
"lib2","SARS-CoV-2","CGACCTTGTTAACAAT",1,19.5,9.74,-1.1,0.15,2.28,1,0.01,">1 nonsynonymous","I2R K94C S139N",3
"lib2","SARS-CoV-2","CGACCTTTAAACACTG",3,34.39,8.56,-2.28,0.1,3,1.12,0,">1 nonsynonymous","V37D I104Y S113N",3
"lib2","SARS-CoV-2","CGACGAAATTAGCACA",1,37.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S43Y N64M G86I",3
"lib2","SARS-CoV-2","CGACGAATCAGCCAGG",10,44.78,7.49,-3.35,0.32,1.5,1.11,0.03,">1 nonsynonymous","V103R G166L",2
"lib2","SARS-CoV-2","CGACGACAAAATCATA",8,79.42,10.44,-0.39,0.05,2.91,1.07,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","CGACGACCAACAAAAA",2,14.46,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","Y50M V103Y",2
"lib2","SARS-CoV-2","CGACGACCAATGGCTC",1,147.32,9.7,-1.14,0.07,2.52,1.07,0,">1 nonsynonymous","V77M G116F",2
"lib2","SARS-CoV-2","CGACGACGAAAAGGCC",8,104.89,10.75,-0.08,0.05,2.86,1.1,0,"1 nonsynonymous","N58P",1
"lib2","SARS-CoV-2","CGACGAGGAAAACATA",2,59,10.79,-0.05,0.04,2.86,1.14,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","CGACGATCATTGCACC",28,321.39,10.18,-0.65,0.03,2.78,1.05,0,">1 nonsynonymous","Y35S N40T",2
"lib2","SARS-CoV-2","CGACGATGCGGTGACT",5,22.38,10.85,0.02,0.06,2.97,1.05,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","CGACGATGGATTAAAT",8,141.24,9.05,-1.79,0.03,2.8,1.1,0,">1 nonsynonymous","S129C I142S",2
"lib2","SARS-CoV-2","CGACGATTGTTATTAG",2,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N D68V R73K D137H K199Q",5
"lib2","SARS-CoV-2","CGACGCAAACCTTCAT",8,105.33,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F12S T63C V103L G117R E141N",5
"lib2","SARS-CoV-2","CGACGCAAAGGAAGGA",2,38.25,10.84,0,0.05,2.97,1.05,0,">1 nonsynonymous","D97R T201H",2
"lib2","SARS-CoV-2","CGACGCACTTAATAAA",1,19.74,8.85,-1.99,0.09,2.1,1,0,">1 nonsynonymous","Y35S N58F K87C N120V S164T",5
"lib2","SARS-CoV-2","CGACGCACTTGAGACC",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C F160D P177Y",3
"lib2","SARS-CoV-2","CGACGCATAAGAAGAC",5,6.5,NA,NA,NA,NA,NA,NA,"stop","K94W G146*",2
"lib2","SARS-CoV-2","CGACGCCAAGATGACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S W106S",2
"lib2","SARS-CoV-2","CGACGCCACTCCAAAC",4,72.32,10.6,-0.23,0.03,3,1,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","CGACGCCCTTTAAGAA",8,155.6,10.1,-0.74,0.05,2.71,1.07,0,">1 nonsynonymous","P7Q A67T T201R",3
"lib2","SARS-CoV-2","CGACGCGAAAGATGAG",8,0.97,NA,NA,NA,NA,NA,NA,"stop","F99Y G117*",2
"lib2","SARS-CoV-2","CGACGCTAAGACTCCC",2,61.29,10.82,-0.02,0.06,2.95,1.06,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","CGACGCTATTTGTTTA",6,43.73,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","C49W N92L Q176F",3
"lib2","SARS-CoV-2","CGACGCTTCGTTTGAA",7,51.39,10.81,-0.02,0.08,2.86,1.15,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","CGACGGACAACACAGA",9,121.34,8.47,-2.37,0.11,2.78,1.07,0.01,">1 nonsynonymous","A42F Q168K",2
"lib2","SARS-CoV-2","CGACGGATCAAAATGC",2,0.51,NA,NA,NA,NA,NA,NA,"stop","T3K T15E N130R A190L P197A S200* T201S",7
"lib2","SARS-CoV-2","CGACGGATCCATAACC",9,11.37,NA,NA,NA,NA,NA,NA,"stop","R25V S36H Q176*",3
"lib2","SARS-CoV-2","CGACGGCCAGCAAAAA",6,107.82,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31T Y119I G152T Q176G",4
"lib2","SARS-CoV-2","CGACGGCCTTAACAAT",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D Y50V T63N G101E F167S",5
"lib2","SARS-CoV-2","CGACGGGAATCGTGAG",7,162.71,10.85,0.01,0.06,2.86,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACGGGCGGGTATAA",4,6.88,6.19,-4.64,1.14,1.5,1.19,0.04,">1 nonsynonymous","A18L S41M P54G D97C",4
"lib2","SARS-CoV-2","CGACGGGGGCAGGCTT",7,85.08,10.36,-0.48,0.04,2.79,1.11,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","CGACGGGTTATCTCGG",3,22.15,10.77,-0.07,0.04,3,1,0,">1 nonsynonymous","K128N S139M P197A",3
"lib2","SARS-CoV-2","CGACGGTAACAGAAAC",1,27.79,9.29,-1.54,0.19,1.69,1.16,0.02,"1 nonsynonymous","Y165K",1
"lib2","SARS-CoV-2","CGACGGTAATATTTTT",6,1.31,NA,NA,NA,NA,NA,NA,"stop","P7M G9A D34P L95G I104* L162R",6
"lib2","SARS-CoV-2","CGACGGTGTGAGAATG",10,2.09,NA,NA,NA,NA,NA,NA,"stop","F62G E154*",2
"lib2","SARS-CoV-2","CGACGTAAAATCATAC",3,31.55,8.36,-2.48,0.2,1.6,1.16,0.02,">1 nonsynonymous","G86S N130T P149F",3
"lib2","SARS-CoV-2","CGACGTAAATGAACTG",1,28.8,9.31,-1.53,0.09,2.19,1,0,">1 nonsynonymous","T15P S19T N64D G83H",4
"lib2","SARS-CoV-2","CGACGTACTAAATATC",1,31.83,10.29,-0.55,0.06,2.84,1.05,0,">1 nonsynonymous","E10S T15N",2
"lib2","SARS-CoV-2","CGACGTCTCGTGATCC",3,16.45,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","G83K Y121I F134N N151S G166D K199V",6
"lib2","SARS-CoV-2","CGACGTCTTATTTAGG",3,17.32,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y93E F167C V181K",3
"lib2","SARS-CoV-2","CGACGTGAGGTTTAGG",10,65.61,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R27L L38P A105S Y121V N130L",5
"lib2","SARS-CoV-2","CGACGTGCGTTGTACT",6,66.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A105W S113E S129V",3
"lib2","SARS-CoV-2","CGACGTTACGCCCCGC",2,30.76,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","L57S N92R",2
"lib2","SARS-CoV-2","CGACGTTGAACATGTC",9,108.39,9.61,-1.23,0.08,2.06,1.05,0,">1 nonsynonymous","L38C L60T",2
"lib2","SARS-CoV-2","CGACGTTGTTACGAAC",5,38.36,9.03,-1.8,0.07,2.89,1.12,0,">1 nonsynonymous","G117I S129D",2
"lib2","SARS-CoV-2","CGACTAAAGGTAATGG",1,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V V20Q",2
"lib2","SARS-CoV-2","CGACTAAGAGCGCGAA",6,1.29,NA,NA,NA,NA,NA,NA,"stop","G146P G152* G166A L188Q",4
"lib2","SARS-CoV-2","CGACTAAGCATTCAAA",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W V71W F156A",3
"lib2","SARS-CoV-2","CGACTAATCCAAACAT",3,49.63,6.36,-4.48,0.87,1.5,1.21,0.04,">1 nonsynonymous","S113L G174L",2
"lib2","SARS-CoV-2","CGACTACAGCCAGTTT",3,43.56,10.01,-0.82,0.05,2.9,1.05,0,">1 nonsynonymous","I2C Y121L K128T F160C",4
"lib2","SARS-CoV-2","CGACTACAGTGTCAGC",8,35.91,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y35M T55G N92M E141Y",4
"lib2","SARS-CoV-2","CGACTACGGGTTCAAA",4,84.21,9.07,-1.77,0.2,1.51,1.1,0.02,">1 nonsynonymous","N1L S69Q Q84M N120R S129C P149E",6
"lib2","SARS-CoV-2","CGACTACTACTGTATG",1,0,NA,NA,NA,NA,NA,NA,"stop","S41G K87*",2
"lib2","SARS-CoV-2","CGACTACTATCCAGAT",17,272.39,10.37,-0.46,0.02,2.9,1.04,0,">1 nonsynonymous","R16C E141Y T201S",3
"lib2","SARS-CoV-2","CGACTACTTCGAAATC",5,20.52,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","Y35N C49S F70S P82F A89T D97M A105M",7
"lib2","SARS-CoV-2","CGACTAGATGCGCCTA",8,0.38,NA,NA,NA,NA,NA,NA,"stop","Y39S I72* Y93R T201G",4
"lib2","SARS-CoV-2","CGACTAGCCCAAATTC",2,9.71,10.77,-0.07,0.07,2.84,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","CGACTAGCGACACACT",10,202.34,8.18,-2.65,0.12,2.15,1.08,0,">1 nonsynonymous","K94Q F126A",2
"lib2","SARS-CoV-2","CGACTAGCTCTTACCA",4,96,10.41,-0.43,0.06,2.94,1.05,0,"1 nonsynonymous","P169Y",1
"lib2","SARS-CoV-2","CGACTAGCTTCGAATA",3,65.52,9.84,-1,0.11,2.46,1.06,0,">1 nonsynonymous","Y35R K114L",2
"lib2","SARS-CoV-2","CGACTAGTACCAATAC",8,0.27,NA,NA,NA,NA,NA,NA,"stop","F8* V103L G146T",3
"lib2","SARS-CoV-2","CGACTATAGATTAAAT",1,14.74,7.64,-3.19,0.35,1.5,1,0.04,">1 nonsynonymous","G51W Y175T A190F",3
"lib2","SARS-CoV-2","CGACTATATCAAACTC",16,153.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37A I80R G86W K199M",4
"lib2","SARS-CoV-2","CGACTATCTACGACCA",3,58.91,10.68,-0.16,0.03,2.9,1.11,0,">1 nonsynonymous","N110W S200L",2
"lib2","SARS-CoV-2","CGACTATCTCATCCCA",9,38.86,7.05,-3.79,0.52,1.5,1.33,0.04,">1 nonsynonymous","T3S T15V R136P",3
"lib2","SARS-CoV-2","CGACTATTAAAACAAT",5,13.35,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N40L T55G Y66K L95T K114N",5
"lib2","SARS-CoV-2","CGACTATTAGGTTATT",1,17.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G51H K94P G146T E154K",4
"lib2","SARS-CoV-2","CGACTATTCGTTATAT",1,7.7,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","P7F L38V I80R L122P T170K",5
"lib2","SARS-CoV-2","CGACTCAACCAAAGCC",6,216.84,9.91,-0.93,0.06,2.58,1.04,0,">1 nonsynonymous","Y35G R78F P149E",3
"lib2","SARS-CoV-2","CGACTCACATCATGAA",2,59.75,8.5,-2.33,0.12,1.8,1.07,0,">1 nonsynonymous","N4L N120C T140P V153A",4
"lib2","SARS-CoV-2","CGACTCACTAGTTTAT",8,0.48,NA,NA,NA,NA,NA,NA,"stop","W23* L60C Y165L",3
"lib2","SARS-CoV-2","CGACTCACTTAAAAAT",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F44* Y119D F126R",3
"lib2","SARS-CoV-2","CGACTCAGAGGAGACC",6,84.22,9.83,-1.01,0.11,2.01,1.15,0.01,">1 nonsynonymous","V77M G83F T100S",3
"lib2","SARS-CoV-2","CGACTCAGTACACACA",17,339.78,10.31,-0.53,0.02,2.9,1.05,0,">1 nonsynonymous","S41A S164W",2
"lib2","SARS-CoV-2","CGACTCAGTCGCTAAG",2,35.13,7.89,-2.95,0.29,1.5,1.05,0.04,">1 nonsynonymous","A33G Y50S",2
"lib2","SARS-CoV-2","CGACTCAGTCGTCCGC",12,172.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y119A Y123L R136K C158Y",4
"lib2","SARS-CoV-2","CGACTCATAAATGTTA",2,38.95,6.26,-4.58,0.65,1.5,1.15,0.02,">1 nonsynonymous","D59P F167L",2
"lib2","SARS-CoV-2","CGACTCATAGTTCACA",5,13.2,10.87,0.03,0.08,2.93,1.06,0,"1 nonsynonymous","C195A",1
"lib2","SARS-CoV-2","CGACTCCGCGTTAACT",1,62.82,9.38,-1.45,0.06,2.86,1.15,0,">1 nonsynonymous","Y119V T201S",2
"lib2","SARS-CoV-2","CGACTCCGGCTTACTT",2,76.66,9.72,-1.11,0.07,2.15,1.02,0,"1 nonsynonymous","A89M",1
"lib2","SARS-CoV-2","CGACTCCTTGATCCAC",3,17.26,8.81,-2.03,0.46,1.5,1,0.07,">1 nonsynonymous","F44Y D68F",2
"lib2","SARS-CoV-2","CGACTCGAAACATCAA",6,2.82,NA,NA,NA,NA,NA,NA,"stop","W23L P82* Y93G A105I P197H",5
"lib2","SARS-CoV-2","CGACTCGCAAGTATAT",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E T85L D98K F134S",4
"lib2","SARS-CoV-2","CGACTCTTATAAAATA",1,28.64,7.7,-3.14,0.28,1.5,1.22,0.03,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","CGACTCTTGGGCACCA",9,3.06,NA,NA,NA,NA,NA,NA,"stop","P82R T201*",2
"lib2","SARS-CoV-2","CGACTGAAACAAATGT",8,10.74,NA,NA,NA,NA,NA,NA,"stop","G86F Y91* Y119G",3
"lib2","SARS-CoV-2","CGACTGAATAGCCGAT",7,73.94,6.77,-4.06,0.38,1.5,1.25,0.02,">1 nonsynonymous","V65S G86A Q163M",3
"lib2","SARS-CoV-2","CGACTGACCAAACGCG",2,8.16,6.21,-4.63,0.33,2.07,1.11,0.01,">1 nonsynonymous","L5P N40A P82W",3
"lib2","SARS-CoV-2","CGACTGACTACGAAAC",7,34.77,10.19,-0.65,0.11,2.65,1.08,0,">1 nonsynonymous","A33T S41V D97P",3
"lib2","SARS-CoV-2","CGACTGATATGAGCCC",11,182.08,9.04,-1.8,0.06,2.52,1.08,0,">1 nonsynonymous","D59Q P161T",2
"lib2","SARS-CoV-2","CGACTGATCTAAACCT",21,339.81,6,-4.84,0.98,1.5,1.22,0.01,">1 nonsynonymous","F8Q A81E V115S G116E Y178V",5
"lib2","SARS-CoV-2","CGACTGCAATTTGCGG",13,2.81,NA,NA,NA,NA,NA,NA,"stop","F17* G83V K94S",3
"lib2","SARS-CoV-2","CGACTGCACCGTTGAC",7,33.95,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F62I V65L D90Y K114T C150M A190F",6
"lib2","SARS-CoV-2","CGACTGCTCGGATACG",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75N I88F E154K",3
"lib2","SARS-CoV-2","CGACTGTACTACATAC",2,16.71,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","S29W S41I K48Q I104S S164H Q168T",6
"lib2","SARS-CoV-2","CGACTGTATCATTCAT",9,93.2,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","N4L S36N L60T G83L L95Y F99S I104T K132R P197G",9
"lib2","SARS-CoV-2","CGACTGTCGACCCAAT",1,5.9,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","G51K I80N A105N I138N V173G",5
"lib2","SARS-CoV-2","CGACTGTGAGCTATCG",6,75.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R T85M K114M",3
"lib2","SARS-CoV-2","CGACTGTGTTAAAGCT",4,28.29,10.56,-0.27,0.08,2.88,1.09,0,">1 nonsynonymous","T55S K94H Q163C",3
"lib2","SARS-CoV-2","CGACTGTTCTATACAG",4,6.24,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P7S G86R",2
"lib2","SARS-CoV-2","CGACTTAAATAAAGCA",14,151.4,7.88,-2.96,0.15,1.66,1.09,0.01,">1 nonsynonymous","G9L S113F",2
"lib2","SARS-CoV-2","CGACTTACCTTCGATC",4,86.17,10.78,-0.05,0.04,2.95,1.05,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","CGACTTACTCAATACC",27,178.28,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23R N58K L95S R136G",4
"lib2","SARS-CoV-2","CGACTTAGTAAAGGCA",9,140.87,9.21,-1.63,0.09,1.9,1.07,0,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","CGACTTCAGAAATGTA",4,22.05,7.13,-3.71,0.35,1.5,1.05,0.01,">1 nonsynonymous","L60P F99S",2
"lib2","SARS-CoV-2","CGACTTCATAGTCCTG",6,31.09,6.52,-4.32,0.62,1.5,1.05,0.05,">1 nonsynonymous","T63D D68V R73Q D90T L131K G155L",6
"lib2","SARS-CoV-2","CGACTTCCCTACGACA",8,64.7,10.19,-0.65,0.07,2.77,1,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","CGACTTCCTGAGGGTA",11,74.03,8.8,-2.04,0.08,2.85,1.15,0,">1 nonsynonymous","N151A G166K V173F T201A",4
"lib2","SARS-CoV-2","CGACTTCTCGTCTCGT",1,13.77,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I2E Y91L N107W I138P S200I",5
"lib2","SARS-CoV-2","CGACTTGAAGACAACA",8,67.09,10.77,-0.06,0.04,2.95,1.06,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","CGACTTGATCTCAACC",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H L60A A81K Q84T",4
"lib2","SARS-CoV-2","CGACTTTAATTAGCTA",2,12.8,9.76,-1.07,0.13,2.68,1.17,0.01,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","CGACTTTAGTACTAAT",1,16.56,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A22W G117C T170C",3
"lib2","SARS-CoV-2","CGACTTTAGTGCTATC",1,15.7,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","E10C R73N A81Q Y91K R127T P133Q Y159G",7
"lib2","SARS-CoV-2","CGACTTTCTCCGGAAC",1,30.29,10.41,-0.43,0.04,3,1.02,0,">1 nonsynonymous","A33P K56Q P149I",3
"lib2","SARS-CoV-2","CGACTTTCTTAACGTT",5,163.86,9.81,-1.03,0.03,2.95,1.05,0,">1 nonsynonymous","K87L G152V",2
"lib2","SARS-CoV-2","CGACTTTGGCGCGGGA",5,6.12,NA,NA,NA,NA,NA,NA,"stop","F47H E141* S164F",3
"lib2","SARS-CoV-2","CGACTTTTTCAAGTCA",4,11.34,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N30Y R73S G101H",3
"lib2","SARS-CoV-2","CGAGAAAAAACGGAAA",1,25.91,10.61,-0.23,0.06,2.98,1.03,0,">1 nonsynonymous","S29G D75K I138L N151L",4
"lib2","SARS-CoV-2","CGAGAAAAAATTAGCC",13,139.33,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6W N40C G74C",3
"lib2","SARS-CoV-2","CGAGAAAATACGGATA",5,17.86,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G86Y P169G",2
"lib2","SARS-CoV-2","CGAGAAAATATCTCAG",3,4.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S43N",1
"lib2","SARS-CoV-2","CGAGAAAATTCTACAA",4,24.87,10.82,-0.01,0.07,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGAAACAAATCGAG",4,85.26,6.36,-4.48,0.15,1.92,1.12,0,">1 nonsynonymous","I28R Y35R L60T P133I",4
"lib2","SARS-CoV-2","CGAGAAACACCATTGT",7,31.41,6.08,-4.75,0.85,1.5,1.18,0.02,">1 nonsynonymous","I2N R27G D34P C150F N157L",5
"lib2","SARS-CoV-2","CGAGAAACTTTGGTAA",2,1.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","CGAGAAAGTATCGAAC",10,111.58,8.13,-2.71,0.13,2.3,1.13,0.01,"1 nonsynonymous","G172S",1
"lib2","SARS-CoV-2","CGAGAAATATACAAAC",5,17.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91E D98I I138C",3
"lib2","SARS-CoV-2","CGAGAACAATCATCTT",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43M N110D P149S V153A Q176P",5
"lib2","SARS-CoV-2","CGAGAACACTCAACAC",2,47.19,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S36F V52Y D112Q R127W F156A",5
"lib2","SARS-CoV-2","CGAGAACCAACCCGTA",2,74.72,10.65,-0.18,0.05,2.91,1.08,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","CGAGAACGATGAGAAC",2,7.08,10.55,-0.29,0.12,3,1,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","CGAGAACGTCTATCAT",21,302.14,9.92,-0.91,0.05,2.3,1.02,0,">1 nonsynonymous","T63P D90W",2
"lib2","SARS-CoV-2","CGAGAACTAAACGGTG",1,24.39,10.92,0.08,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGAACTACGCGATG",2,5.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I I72R D90V Y175K",4
"lib2","SARS-CoV-2","CGAGAAGAAATAGCCT",2,42.25,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S43G A67I P82L D98K I138S P161V T201G",7
"lib2","SARS-CoV-2","CGAGAAGAACTCTAAA",5,47.37,10.48,-0.35,0.06,2.82,1.14,0,">1 nonsynonymous","A81V F160K",2
"lib2","SARS-CoV-2","CGAGAAGAATTTGCAA",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35H F47R G83S T100V S129K",5
"lib2","SARS-CoV-2","CGAGAAGAGTAAAAAT",17,176.44,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17E S29P V71S I88Q",4
"lib2","SARS-CoV-2","CGAGAAGCAAAAACCC",5,41.75,7.81,-3.03,0.32,1.5,1.12,0.04,">1 nonsynonymous","N4K G86R",2
"lib2","SARS-CoV-2","CGAGAAGCTAACGAAA",2,20.96,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G83F K94V Y119D N151F",4
"lib2","SARS-CoV-2","CGAGAAGCTCCCCCTT",4,38.95,10.69,-0.15,0.06,2.85,1.13,0,"1 nonsynonymous","E135D",1
"lib2","SARS-CoV-2","CGAGAAGTCCAGATAT",8,86.88,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","E10M G86A A145Y C158K",4
"lib2","SARS-CoV-2","CGAGAAGTTACGAACA",8,89.11,10.82,-0.01,0.06,2.98,1.05,0,"1 nonsynonymous","E141H",1
"lib2","SARS-CoV-2","CGAGAAGTTTGTCATA",3,22.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K87E V103L",2
"lib2","SARS-CoV-2","CGAGAATAAAATTTAC",3,40.78,10.16,-0.68,0.04,2.93,1.06,0,">1 nonsynonymous","A22V K87Y K199T",3
"lib2","SARS-CoV-2","CGAGAATAACGGCAAG",1,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104L S113I Y143L P149C",4
"lib2","SARS-CoV-2","CGAGAATAAGTAATTT",3,104.15,9.95,-0.89,0.06,2.84,1.1,0,">1 nonsynonymous","N118T S164N K199I",3
"lib2","SARS-CoV-2","CGAGAATACTCCACTA",3,33.12,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I28K L60T G155V",3
"lib2","SARS-CoV-2","CGAGAATATAGTTTGC",11,99.28,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38M F44N N92Y R124C E141K",5
"lib2","SARS-CoV-2","CGAGAATCCTAAGAGG",2,7.82,11.16,0.32,0.24,2.87,1,0.01,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","CGAGAATCTTAAAGCA",1,35.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D59S Q168N P177E",3
"lib2","SARS-CoV-2","CGAGAATTTTCCATAA",1,32.7,8.81,-2.03,0.27,1.5,1.01,0.04,">1 nonsynonymous","V32F P54V A89R",3
"lib2","SARS-CoV-2","CGAGAATTTTTGCAAT",7,33.37,10.61,-0.23,0.06,2.92,1.11,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","CGAGACAAAGCAATGC",17,68.38,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20R A33Q S45M D98S Y121K C158F",6
"lib2","SARS-CoV-2","CGAGACAAGCACCAGC",6,51.76,6.1,-4.73,0.72,1.5,1.09,0.02,">1 nonsynonymous","S45Y V77G G117Y P161I Y175K",5
"lib2","SARS-CoV-2","CGAGACACCACTTATA",6,36.78,9.19,-1.64,0.14,1.54,1.04,0.01,"1 nonsynonymous","F17K",1
"lib2","SARS-CoV-2","CGAGACAGCCCCCCAA",10,232.05,10.71,-0.12,0.03,2.92,1.09,0,">1 nonsynonymous","C195Y S200P",2
"lib2","SARS-CoV-2","CGAGACATAAAGGCAA",13,2.22,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","CGAGACATATGCAATT",7,25.44,8.73,-2.11,0.19,1.5,1.08,0.02,">1 nonsynonymous","C6R F17I D97L",3
"lib2","SARS-CoV-2","CGAGACATCAATGATG",5,34.4,10.14,-0.7,0.09,2.43,1.02,0,">1 nonsynonymous","A33T S69A",2
"lib2","SARS-CoV-2","CGAGACATGATTACCT",5,266.06,10.3,-0.54,0.04,2.81,1.06,0,">1 nonsynonymous","P7L Y39S",2
"lib2","SARS-CoV-2","CGAGACCAAGATTCTG",1,47.04,10.84,0,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGACCCTTAAATGT",8,79.57,8.59,-2.25,0.15,1.5,1.07,0.01,">1 nonsynonymous","S19L A190T",2
"lib2","SARS-CoV-2","CGAGACCGTCTCCGTG",4,56.27,10.82,-0.02,0.04,2.89,1.09,0,">1 nonsynonymous","F44Y F160Y",2
"lib2","SARS-CoV-2","CGAGACGCTTTAAACT",5,60.91,10.84,0.01,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGACGTTTGGGACT",3,31.54,10.07,-0.76,0.06,2.83,1.01,0,">1 nonsynonymous","S41K Y121I",2
"lib2","SARS-CoV-2","CGAGACTAAACCAATC",1,14.75,10.17,-0.67,0.08,2.9,1.03,0,">1 nonsynonymous","T15I G83R",2
"lib2","SARS-CoV-2","CGAGACTAACTATATG",8,16.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L38W C61N L95T A105S",4
"lib2","SARS-CoV-2","CGAGACTACGACATAA",4,0.83,NA,NA,NA,NA,NA,NA,"stop","T3S A81S A105Y L111I G117* K132P A145T E154L",8
"lib2","SARS-CoV-2","CGAGACTAGGTCATTA",4,117.45,10.31,-0.53,0.03,2.8,1.06,0,"1 nonsynonymous","E135V",1
"lib2","SARS-CoV-2","CGAGACTATGACCCGA",2,39.35,10.66,-0.18,0.11,2.84,1.16,0.01,">1 nonsynonymous","T55N C61T",2
"lib2","SARS-CoV-2","CGAGACTCAGACTAAA",6,8.94,NA,NA,NA,NA,NA,NA,"stop","G83Y N107* S147K G174D",4
"lib2","SARS-CoV-2","CGAGACTCCTCCCCGT",6,38.52,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F99N W106N",2
"lib2","SARS-CoV-2","CGAGACTTACACCATA",2,149.43,10.49,-0.34,0.04,2.86,1.02,0,">1 nonsynonymous","F62W S139I",2
"lib2","SARS-CoV-2","CGAGAGAAAGTAGGCA",1,1.1,NA,NA,NA,NA,NA,NA,"stop","G9V A89F Y119G P149*",4
"lib2","SARS-CoV-2","CGAGAGAAATGATAAG",1,1.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R27C",1
"lib2","SARS-CoV-2","CGAGAGAAGACATATA",5,52.29,10.53,-0.31,0.08,2.88,1.01,0,">1 nonsynonymous","L60M D97G S129V F160G",4
"lib2","SARS-CoV-2","CGAGAGAAGGATGGTA",3,39.18,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L5F R25P Y39S I88C F160E",5
"lib2","SARS-CoV-2","CGAGAGAAGGATTATT",12,54.08,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","N1V T55P L60Q D90H S113N",5
"lib2","SARS-CoV-2","CGAGAGAAGTTGTAGT",1,14.81,10.48,-0.35,0.12,2.85,1.01,0,">1 nonsynonymous","Y50K I72T F134L",3
"lib2","SARS-CoV-2","CGAGAGAATTCATATT",2,38.96,8.24,-2.59,0.13,2.27,1.05,0.01,">1 nonsynonymous","L60N G146E G155A",3
"lib2","SARS-CoV-2","CGAGAGACAAAGGACC",6,110.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36N F62M N92F",3
"lib2","SARS-CoV-2","CGAGAGAGATTAAATA",1,29.36,10.86,0.03,0.06,2.94,1.04,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CGAGAGAGGCGGCCGA",2,0.22,NA,NA,NA,NA,NA,NA,"stop","K56S G86*",2
"lib2","SARS-CoV-2","CGAGAGATAAAAACAA",3,27.76,8.4,-2.44,0.4,1.5,1.06,0.05,">1 nonsynonymous","G9D T100S I104S G152L",4
"lib2","SARS-CoV-2","CGAGAGATTAGGTAAA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114S T170M",2
"lib2","SARS-CoV-2","CGAGAGCACATTAGCA",4,22.19,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G86K G146V",2
"lib2","SARS-CoV-2","CGAGAGCATGAGATAA",7,67.67,6.03,-4.8,1.18,1.5,1.22,0.03,">1 nonsynonymous","G9K D34H S43D Y119F K128D P133V",6
"lib2","SARS-CoV-2","CGAGAGCGAATAAACG",11,192.97,10.78,-0.05,0.04,2.93,1.08,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","CGAGAGCGCCGATCGA",5,35.79,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","A14V T55L F62W Y93S",4
"lib2","SARS-CoV-2","CGAGAGGGTATTCAGT",19,195.19,10.62,-0.21,0.04,2.92,1.07,0,">1 nonsynonymous","D98N K114C G152D",3
"lib2","SARS-CoV-2","CGAGAGGTTCCAATAT",5,51.84,10.44,-0.39,0.07,2.73,1.04,0,">1 nonsynonymous","Q84L E141S",2
"lib2","SARS-CoV-2","CGAGAGTCCGAAGAAC",2,23.49,6.48,-4.36,0.53,1.5,1.15,0.02,"1 nonsynonymous","Y159G",1
"lib2","SARS-CoV-2","CGAGAGTTCATATAGA",4,44.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17L D59V G155Y S164R T170Y P177E",6
"lib2","SARS-CoV-2","CGAGATAAAAATAGAA",3,13.67,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A14R I72L G116K G152V N171K",5
"lib2","SARS-CoV-2","CGAGATAACTTATGAA",2,7.47,7.64,-3.2,0.69,1.5,1,0.07,">1 nonsynonymous","G83V F185C",2
"lib2","SARS-CoV-2","CGAGATAATAACCCTG",2,0.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S C61Q G117V",3
"lib2","SARS-CoV-2","CGAGATACCTATAAGC",3,67.63,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8I R27P Q163M P177M",4
"lib2","SARS-CoV-2","CGAGATACGCAATGTG",2,39.01,8.64,-2.19,0.14,2.64,1.16,0.01,">1 nonsynonymous","S36C F156I G174L",3
"lib2","SARS-CoV-2","CGAGATACGGCAGCCG",1,12.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29A L38M V103Q",3
"lib2","SARS-CoV-2","CGAGATAGACACAAAA",3,19.66,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","P82D N157S F167S K198R",4
"lib2","SARS-CoV-2","CGAGATAGATACAGGC",3,64.34,10.81,-0.02,0.05,2.97,1.05,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","CGAGATAGATCCACAA",7,32.74,8.65,-2.19,0.11,1.73,1.09,0,">1 nonsynonymous","S19L L122Q F160S Q168S A192H",5
"lib2","SARS-CoV-2","CGAGATAGCTTAATTG",5,40.16,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y35V V77E Y143S G155K",4
"lib2","SARS-CoV-2","CGAGATATAGTGCTGA",5,85.73,10.64,-0.19,0.03,2.98,1.03,0,">1 nonsynonymous","G9L T100F",2
"lib2","SARS-CoV-2","CGAGATATATACAATT",1,20.87,10.79,-0.04,0.05,2.98,1.06,0,"1 nonsynonymous","V37P",1
"lib2","SARS-CoV-2","CGAGATATATGCACCC",5,42.44,6.68,-4.15,0.36,1.5,1.18,0.02,">1 nonsynonymous","K48C Y66I W106C",3
"lib2","SARS-CoV-2","CGAGATATCGACATTA",7,2.63,NA,NA,NA,NA,NA,NA,"stop","I88* Y123C Q144N",3
"lib2","SARS-CoV-2","CGAGATATGGTAGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R124F Y175*",2
"lib2","SARS-CoV-2","CGAGATATTAAGCTAA",10,1.19,NA,NA,NA,NA,NA,NA,"stop","V103* G117Q Q168T T201A",4
"lib2","SARS-CoV-2","CGAGATCAAAAATAAA",7,42.1,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N13Y G74C G86N",3
"lib2","SARS-CoV-2","CGAGATGAATCACTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W D34L N120Y D137R",4
"lib2","SARS-CoV-2","CGAGATGATGCTATGT",3,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S45T L95R D98H N130E Y165A",6
"lib2","SARS-CoV-2","CGAGATGCTTTTCCCT",14,166.31,10.04,-0.79,0.06,2.44,1.04,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","CGAGATGGTTCCTAAA",4,146.5,10.7,-0.14,0.03,2.97,1.05,0,"1 nonsynonymous","F160P",1
"lib2","SARS-CoV-2","CGAGATGTATAGAGTC",7,63.42,9.51,-1.33,0.03,2.86,1.07,0,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","CGAGATTATTTACACG",5,126.78,10.38,-0.46,0.05,2.74,1.04,0,">1 nonsynonymous","N13K V173F",2
"lib2","SARS-CoV-2","CGAGATTGTCATCCAG",5,69.61,9.32,-1.51,0.15,1.5,1.09,0.01,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","CGAGCAAAAAGATATA",3,49.55,8.31,-2.53,0.12,3,1.06,0.01,">1 nonsynonymous","E10T Q84S L125S G166C",4
"lib2","SARS-CoV-2","CGAGCAAAAAGCAAAT",5,95.45,10.89,0.06,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGCAAGCTTATAAT",1,56.76,8.35,-2.49,0.08,2.23,1.07,0,">1 nonsynonymous","K87A N120T G174Y T201M",4
"lib2","SARS-CoV-2","CGAGCAAGGTATCTCG",2,30.42,10.09,-0.75,0.11,2.77,1,0.01,">1 nonsynonymous","L57G N151A",2
"lib2","SARS-CoV-2","CGAGCAATTATATTAA",10,123.8,10.16,-0.68,0.06,2.56,1.01,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CGAGCAATTTCCGTAG",7,7.38,NA,NA,NA,NA,NA,NA,"stop","K87Q L122*",2
"lib2","SARS-CoV-2","CGAGCACAGATTAATT",2,18.37,9.01,-1.83,0.18,1.5,1.03,0.02,">1 nonsynonymous","F8T I28G",2
"lib2","SARS-CoV-2","CGAGCACATCAATCCA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D S41N G152F",3
"lib2","SARS-CoV-2","CGAGCACCAATCGGGG",1,32.21,9.52,-1.31,0.11,2.33,1.18,0,">1 nonsynonymous","N107A E154G",2
"lib2","SARS-CoV-2","CGAGCACGAATCCGGC",3,17.36,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","CGAGCAGCGACATACA",2,33.02,9.55,-1.28,0.07,2.89,1.07,0,">1 nonsynonymous","Y119H L122V",2
"lib2","SARS-CoV-2","CGAGCAGTCAGTGGTT",3,8.33,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3A E10I Y91V K128I G166C",5
"lib2","SARS-CoV-2","CGAGCAGTTATTTGTA",9,184.8,10.89,0.05,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGCATGTGCTACGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E G86R L122P S200L",4
"lib2","SARS-CoV-2","CGAGCCAACTAGGACA",2,9.96,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","S69K Y175M",2
"lib2","SARS-CoV-2","CGAGCCAGCTACAGAA",3,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K N171S",2
"lib2","SARS-CoV-2","CGAGCCATAATTAAAC",2,18.49,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V37G R78S Y121L Y143T T170E",5
"lib2","SARS-CoV-2","CGAGCCATGCGGCCTT",1,41.11,9.32,-1.51,0.07,2.93,1.05,0,">1 nonsynonymous","T55Y N64K N110T Y119S",4
"lib2","SARS-CoV-2","CGAGCCCATTTCTTGG",3,26.47,6.03,-4.81,1.21,1.5,1.18,0.02,">1 nonsynonymous","E10P Y35S Y93S L162S",4
"lib2","SARS-CoV-2","CGAGCCCCCTTAAAGG",17,23.73,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A42C Y93L W106F",3
"lib2","SARS-CoV-2","CGAGCCCCGTTTTAAA",4,27.17,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G83P G146V Y165C",3
"lib2","SARS-CoV-2","CGAGCCCTTATACCCC",19,3.83,NA,NA,NA,NA,NA,NA,"stop","I2V E10H A33R A42G G86S F167*",6
"lib2","SARS-CoV-2","CGAGCGAATACTGTTC",1,34.28,10.47,-0.37,0.05,3,1,0,">1 nonsynonymous","A14S C61L P197T",3
"lib2","SARS-CoV-2","CGAGCGAGATAAACAG",11,66.03,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I2D S19V G86S A89N P133W C195R",6
"lib2","SARS-CoV-2","CGAGCGAGATAGATCT",1,16.83,10.88,0.04,0.08,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CGAGCGCAACGGTTAT",8,125.85,10.86,0.02,0.04,2.94,1.07,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CGAGCGCCAGATAACA",15,32.93,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3P Y35S V103A",3
"lib2","SARS-CoV-2","CGAGCGCTGGGTGGCC",8,3.39,NA,NA,NA,NA,NA,NA,"stop","R73A K114H L131V N151*",4
"lib2","SARS-CoV-2","CGAGCTAATCCGTAAC",1,4.06,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGAGCTACAATGATTT",15,59.03,8.76,-2.07,0.2,1.5,1.01,0.02,">1 nonsynonymous","D34P G51D L60Y",3
"lib2","SARS-CoV-2","CGAGCTAGGTACAATC",6,31.27,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","S43L K87L V103H V115L",4
"lib2","SARS-CoV-2","CGAGCTATAAAACTGA",14,75.49,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y66R C150S F160T Y178S",4
"lib2","SARS-CoV-2","CGAGCTGATATACGCG",3,95.23,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F70Y Y91S S184V L188Y",4
"lib2","SARS-CoV-2","CGAGCTGTCTTCGAAT",6,85.38,10.78,-0.06,0.03,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CGAGCTGTTACCTTAA",13,34.38,9.86,-0.97,0.1,2.11,1.03,0,">1 nonsynonymous","T63G D90I S129G",3
"lib2","SARS-CoV-2","CGAGCTTATCAAGTAA",6,32.18,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","S19F V52A G83S N110R G166D T170V V182W K198L",8
"lib2","SARS-CoV-2","CGAGGAAAAAGACTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H D59G P96W L131F",4
"lib2","SARS-CoV-2","CGAGGAAAACTGATCC",1,0.42,NA,NA,NA,NA,NA,NA,"stop","C49W C61S P149T F167*",4
"lib2","SARS-CoV-2","CGAGGAAAATTTGCAA",5,6.4,10.2,-0.63,0.1,3,1.06,0,">1 nonsynonymous","N24R F156Q Q163L",3
"lib2","SARS-CoV-2","CGAGGAAACCAAATGC",2,2.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","CGAGGAACCTGGGCAA",16,377.34,10.67,-0.17,0.02,2.93,1.06,0,">1 nonsynonymous","N109M V173L",2
"lib2","SARS-CoV-2","CGAGGAACTTATATAG",4,113.77,9.3,-1.53,0.05,2.72,1.08,0,">1 nonsynonymous","Y121P T148S",2
"lib2","SARS-CoV-2","CGAGGAATAGAAGTAG",3,31.31,10.6,-0.24,0.04,3,1.01,0,">1 nonsynonymous","D59Y Y66T",2
"lib2","SARS-CoV-2","CGAGGAATCGGCATAC",7,75.58,10.29,-0.55,0.07,2.66,1,0,">1 nonsynonymous","D98L F160K V180C",3
"lib2","SARS-CoV-2","CGAGGAATTACGGCTA",5,80.52,8.27,-2.57,0.15,2.84,1.02,0.01,">1 nonsynonymous","G9C Y159L",2
"lib2","SARS-CoV-2","CGAGGACAGGATTATA",1,46.04,10.03,-0.81,0.09,2.31,1.12,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","CGAGGACCCTGATGGT",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63N F156Q Q168S",3
"lib2","SARS-CoV-2","CGAGGACGAGATTATT",2,32.97,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","K94E R124H S139N",3
"lib2","SARS-CoV-2","CGAGGACGATTGTCTT",3,46.19,8.12,-2.72,0.19,2.01,1.14,0.01,">1 nonsynonymous","D112T Q168R",2
"lib2","SARS-CoV-2","CGAGGACTGAATGTCC",7,98.68,10.14,-0.7,0.08,2.56,1.03,0,">1 nonsynonymous","P96N K128Y",2
"lib2","SARS-CoV-2","CGAGGAGATGGCATGG",8,41.1,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G83F N92S S108I K128Y E135Q P149D",6
"lib2","SARS-CoV-2","CGAGGAGCTACTAGGA",3,29.02,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","D68L P82M I142R G152P",4
"lib2","SARS-CoV-2","CGAGGAGGAGGAATAG",2,14.9,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","T100I R124Y A145I",3
"lib2","SARS-CoV-2","CGAGGAGGCTCAGTGT",5,4.82,NA,NA,NA,NA,NA,NA,"stop","A33* L131V",2
"lib2","SARS-CoV-2","CGAGGATAGAGTACCT",9,168.11,6.38,-4.46,0.4,1.5,1.19,0.01,">1 nonsynonymous","V37R N107Y",2
"lib2","SARS-CoV-2","CGAGGATCACAGTCTT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N13C W23R S41D Y91R F167*",5
"lib2","SARS-CoV-2","CGAGGATGTTCTATCT",2,32.53,10.35,-0.48,0.05,3,1.03,0,">1 nonsynonymous","V37H L57F",2
"lib2","SARS-CoV-2","CGAGGATTAAAATATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9V A14S R25F S36C P96* P133S E141K",7
"lib2","SARS-CoV-2","CGAGGATTAAAGGCCG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","Y66A T100P T201*",3
"lib2","SARS-CoV-2","CGAGGATTAGATGGTG",4,43.29,7.93,-2.91,0.11,1.75,1.07,0,">1 nonsynonymous","E141S P177C",2
"lib2","SARS-CoV-2","CGAGGCAACTCTTTCA",3,1.25,NA,NA,NA,NA,NA,NA,"stop","C6G E76* P161N",3
"lib2","SARS-CoV-2","CGAGGCAATTAAATCC",2,13.43,6.68,-4.16,0.46,2.04,1.05,0.05,">1 nonsynonymous","I2G A33L D68V G86R V103E",5
"lib2","SARS-CoV-2","CGAGGCACATAGCAAT",2,4.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","CGAGGCACATTAAAGG",11,0.25,NA,NA,NA,NA,NA,NA,"stop","C158*",1
"lib2","SARS-CoV-2","CGAGGCACCGCATGGC",4,190.26,10.74,-0.1,0.02,3,1.01,0,">1 nonsynonymous","K48V T55A",2
"lib2","SARS-CoV-2","CGAGGCATAAAAGCTG",6,75.67,10.06,-0.78,0.06,2.84,1.15,0,">1 nonsynonymous","N4V S45A K87L",3
"lib2","SARS-CoV-2","CGAGGCATCTTATGGG",7,92.64,10.67,-0.16,0.06,2.91,1.05,0,">1 nonsynonymous","A33V A42R C61L L122A",4
"lib2","SARS-CoV-2","CGAGGCCGAGAACATG",5,84.33,10.88,0.05,0.04,2.91,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGGCCTAAACCGTT",2,15.74,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V37H V77W Y178F L183D",4
"lib2","SARS-CoV-2","CGAGGCCTCAGTGTCG",4,0.24,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","CGAGGCCTGAACATAC",8,22.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33V Y121D L131A",3
"lib2","SARS-CoV-2","CGAGGCGGACAATAAA",3,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75A D90L T100P P133V Q168D",5
"lib2","SARS-CoV-2","CGAGGCTCCAACGGAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92K",1
"lib2","SARS-CoV-2","CGAGGCTTCGAAAATG",1,23.01,10.87,0.03,0.11,2.81,1.21,0.01,"1 nonsynonymous","L111V",1
"lib2","SARS-CoV-2","CGAGGGAAACAAAACT",6,62.54,9.06,-1.77,0.06,2.93,1.05,0,"1 nonsynonymous","F126K",1
"lib2","SARS-CoV-2","CGAGGGAAATTCGAAC",5,32.78,6.45,-4.38,0.48,1.5,1.13,0.03,">1 nonsynonymous","F47Y Q84K G101C",3
"lib2","SARS-CoV-2","CGAGGGATCTAGTATT",8,42.93,6,-4.84,0.96,1.5,1.13,0.01,">1 nonsynonymous","G51L D68L D97G A190F",4
"lib2","SARS-CoV-2","CGAGGGCCTAATATCT",7,0.22,NA,NA,NA,NA,NA,NA,"stop","S41F T55E Y123V F160* K198S",5
"lib2","SARS-CoV-2","CGAGGGCGATGATAAA",13,254.46,10.88,0.04,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGGGCTAGTTCCCC",1,61.63,10.57,-0.26,0.09,2.83,1.07,0,">1 nonsynonymous","N58S T63K",2
"lib2","SARS-CoV-2","CGAGGGTAAAATCTTT",1,22.71,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","P7T F62G P96L I142K",4
"lib2","SARS-CoV-2","CGAGGGTACAAACGGA",4,22.2,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C6H V52P V65S K87I Y93K G152V V173L",7
"lib2","SARS-CoV-2","CGAGGTAACCCTACAC",4,19.54,7.51,-3.33,0.54,1.55,1.16,0.08,">1 nonsynonymous","P96Q Y175I",2
"lib2","SARS-CoV-2","CGAGGTACGTTGTTTT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","S41H D98* N120Y Y165S",4
"lib2","SARS-CoV-2","CGAGGTACTAGCGGCA",6,75.98,10.83,-0.01,0.06,2.96,1.06,0,"1 nonsynonymous","R27H",1
"lib2","SARS-CoV-2","CGAGGTAGCCATTAAA",2,53.94,9.99,-0.85,0.09,2.28,1,0,">1 nonsynonymous","L5A N13V",2
"lib2","SARS-CoV-2","CGAGGTATAACGAAAT",10,28.88,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14V Q84L Y91V I104K",4
"lib2","SARS-CoV-2","CGAGGTATAATAGAGA",9,30.46,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","D75G L95Y",2
"lib2","SARS-CoV-2","CGAGGTCATGTGTAAA",9,61.97,7.32,-3.51,0.23,1.5,1.16,0.01,">1 nonsynonymous","N1V N24Y D97S N118H",4
"lib2","SARS-CoV-2","CGAGGTCCAATCGAAT",3,103.88,7.51,-3.32,0.24,1.5,1.15,0.02,">1 nonsynonymous","S113D T148Y",2
"lib2","SARS-CoV-2","CGAGGTCCTATCTCAA",2,45.83,8.36,-2.48,0.14,2.4,1.05,0.01,">1 nonsynonymous","S113W T148S",2
"lib2","SARS-CoV-2","CGAGGTCTTATTTAAA",8,265.44,9.06,-1.78,0.04,2.85,1.12,0,">1 nonsynonymous","Y119A G196C",2
"lib2","SARS-CoV-2","CGAGGTGACAGCTCCC",3,16.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3R N30L F44W F62Q W106D Q144G P149T P177R",8
"lib2","SARS-CoV-2","CGAGGTGACTATTCCC",1,12.22,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C61A G83E C158T",3
"lib2","SARS-CoV-2","CGAGGTGAGTGCACAA",9,26.47,9.01,-1.82,0.26,1.82,1.07,0.04,">1 nonsynonymous","N1W K56T T85Y D98L",4
"lib2","SARS-CoV-2","CGAGGTGCCCCATCCT",3,28.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14C N107L",2
"lib2","SARS-CoV-2","CGAGGTGTTGGAATGA",9,196.01,10.77,-0.07,0.03,2.96,1.05,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","CGAGGTTAAATGGGAA",2,0.15,NA,NA,NA,NA,NA,NA,"stop","P169Y T201*",2
"lib2","SARS-CoV-2","CGAGGTTCTAAATGGA",11,62.31,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S113R F167S",2
"lib2","SARS-CoV-2","CGAGGTTGTCTGTAGT",6,202.59,10.81,-0.03,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGAGGTTTATATTCTA",3,55.69,8.76,-2.07,0.07,2.99,1.08,0,">1 nonsynonymous","S113Y P197V",2
"lib2","SARS-CoV-2","CGAGTATTATACAAGA",13,4.2,NA,NA,NA,NA,NA,NA,"stop","I28S N58* F134N",3
"lib2","SARS-CoV-2","CGAGTCAACAGACATA",2,20.92,7.18,-3.66,0.64,1.5,1.33,0.07,">1 nonsynonymous","C49S K128F P197K",3
"lib2","SARS-CoV-2","CGAGTCATTAAGACTA",6,94.71,8.87,-1.96,0.07,2.91,1.08,0,">1 nonsynonymous","N1A G117W",2
"lib2","SARS-CoV-2","CGAGTCCCTTTTTAAT",4,42.28,8.67,-2.17,0.22,1.5,1.03,0.03,">1 nonsynonymous","I104N E141D",2
"lib2","SARS-CoV-2","CGAGTCCTTAAAAAGA",3,63.9,8.42,-2.42,0.06,2.85,1.02,0,">1 nonsynonymous","S43I N58P Y119A F126V Q163H",5
"lib2","SARS-CoV-2","CGAGTGGTTACAACAA",1,8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73S T100L N120V",3
"lib2","SARS-CoV-2","CGAGTGTGATAATTGA",10,177.27,10.67,-0.17,0.03,2.94,1.08,0,">1 nonsynonymous","R73K P191T",2
"lib2","SARS-CoV-2","CGAGTTAACGCTCTGA",3,72.52,10.27,-0.57,0.06,2.79,1.07,0,">1 nonsynonymous","P133N T201M",2
"lib2","SARS-CoV-2","CGAGTTACGAGTTCGG",6,75.01,9.07,-1.77,0.12,1.53,1.09,0,">1 nonsynonymous","L5P S53F Y178E",3
"lib2","SARS-CoV-2","CGAGTTATATTAATGA",8,135.69,10.74,-0.1,0.05,2.9,1.11,0,">1 nonsynonymous","I2G S129N E154S A190I",4
"lib2","SARS-CoV-2","CGAGTTATTACCAGAC",6,76.47,9.88,-0.95,0.1,2.27,1,0,">1 nonsynonymous","I2G V77T T140G",3
"lib2","SARS-CoV-2","CGAGTTCAACCTGTCG",3,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T A42M C61L G152L",4
"lib2","SARS-CoV-2","CGAGTTCAGCACTATA",9,24.29,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F8N L183R",2
"lib2","SARS-CoV-2","CGAGTTCCGACCAATC",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60I D90Y L183H",3
"lib2","SARS-CoV-2","CGAGTTCTTATGGATC",5,20.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S29R D68P",2
"lib2","SARS-CoV-2","CGAGTTGATAAAGACA",5,83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36V R73W G166Y G174P",4
"lib2","SARS-CoV-2","CGAGTTTATACAAATG",11,66.49,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S43I F99Y W106L",3
"lib2","SARS-CoV-2","CGAGTTTCTCAAAACC",5,3.75,NA,NA,NA,NA,NA,NA,"stop","L5* V32K A105Y",3
"lib2","SARS-CoV-2","CGAGTTTGCGTAGGCC",1,22.8,7.31,-3.52,0.23,1.84,1.14,0.02,">1 nonsynonymous","S53I N107S N130P P149L T170L",5
"lib2","SARS-CoV-2","CGATAAAAAAAGATAG",5,105.6,9.14,-1.7,0.1,2.67,1.08,0,">1 nonsynonymous","N118L F160A",2
"lib2","SARS-CoV-2","CGATAAAAAAGTCCAG",1,31.87,7.57,-3.27,0.23,1.5,1.22,0.01,">1 nonsynonymous","L5Y W23K",2
"lib2","SARS-CoV-2","CGATAAAAGCACACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","V77W K87R G166*",3
"lib2","SARS-CoV-2","CGATAAAATCACTGCG",6,19.04,9.65,-1.19,0.15,2.09,1.04,0.01,">1 nonsynonymous","F126L R136Y",2
"lib2","SARS-CoV-2","CGATAAAATTTTCCTT",5,99.25,6.04,-4.79,0.39,1.5,1.11,0,">1 nonsynonymous","N40L G152V Q168S Y175R",4
"lib2","SARS-CoV-2","CGATAAACAAAATAAT",10,98.79,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y35Q P149M Q168R R179F",4
"lib2","SARS-CoV-2","CGATAAACAAATACTA",2,23.32,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F44W W106S F126L N151T S164L",5
"lib2","SARS-CoV-2","CGATAAACAAGTCCTT",9,42.73,6,-4.84,0.93,3,1.07,0,">1 nonsynonymous","W23L W106R S147I K198I",4
"lib2","SARS-CoV-2","CGATAAACACTGTTAA",10,48.68,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F17S N40L N120R T148W L187D A192V",6
"lib2","SARS-CoV-2","CGATAAACAGCTAAAG",5,33.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S113H K128H L162A",3
"lib2","SARS-CoV-2","CGATAAAGCCTTTCAC",5,213.47,10.27,-0.57,0.03,2.93,1.03,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","CGATAAATCACCTACC",2,16.93,7.82,-3.02,0.13,1.54,1.05,0.01,">1 nonsynonymous","K48L Q144L G152V",3
"lib2","SARS-CoV-2","CGATAAATGAAATGTA",3,34.99,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","N4L S41G R124S F185C",4
"lib2","SARS-CoV-2","CGATAAATGTCAACGC",4,24.6,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N64T G74N P96I S139A G155Y",5
"lib2","SARS-CoV-2","CGATAAATTCCAAGCT",3,13.9,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","W23D N40Y G51A S139V A145R",5
"lib2","SARS-CoV-2","CGATAAATTCCACCAC",4,10.2,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63N V181R",2
"lib2","SARS-CoV-2","CGATAAATTCTGGAGT",3,43.8,10.96,0.13,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATAAATTGCCAGGC",7,127.39,10.8,-0.04,0.05,2.89,1.08,0,">1 nonsynonymous","T3P T140Q",2
"lib2","SARS-CoV-2","CGATAACAAAAATGCT",5,143.03,6.97,-3.87,0.2,1.5,1.15,0.01,">1 nonsynonymous","I2C F8M P161N A190M",4
"lib2","SARS-CoV-2","CGATAACACAAATACA",2,22.91,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G83D N107T Y119M R127S G155C R179I T201A",7
"lib2","SARS-CoV-2","CGATAACCAAAAGCAA",12,295.74,9.66,-1.18,0.03,2.89,1.05,0,"1 nonsynonymous","G146Q",1
"lib2","SARS-CoV-2","CGATAACCAAGAGTTA",2,36.29,10.81,-0.03,0.05,2.98,1.01,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","CGATAACCGCGTTCAG",1,8.21,9.94,-0.9,0.2,2.51,1.02,0.02,">1 nonsynonymous","T3P Y123K G146W",3
"lib2","SARS-CoV-2","CGATAACCTTTAAGAT",9,33.08,6.37,-4.47,0.38,1.5,1.13,0.01,">1 nonsynonymous","R127F S139N",2
"lib2","SARS-CoV-2","CGATAACGGCCTAAAT",3,6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T85S V103Q D112G",3
"lib2","SARS-CoV-2","CGATAAGAAAAAGAAG",7,62.21,6,-4.84,1.22,1.5,1.16,0.01,">1 nonsynonymous","W23P C61N S113L Q144C",4
"lib2","SARS-CoV-2","CGATAAGAAACTTAAA",7,99.93,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","Y143P",1
"lib2","SARS-CoV-2","CGATAAGAGTAGAACG",15,18.85,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F12R",1
"lib2","SARS-CoV-2","CGATAAGAGTGTGGCA",2,87.48,6,-4.84,1.13,1.5,1.14,0.01,">1 nonsynonymous","F70L Q176F",2
"lib2","SARS-CoV-2","CGATAAGATTCAATAG",4,46.13,10.73,-0.1,0.03,3,1.02,0,">1 nonsynonymous","T148A F185M",2
"lib2","SARS-CoV-2","CGATAAGCGATAGCAT",10,66.31,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T15I F167M",2
"lib2","SARS-CoV-2","CGATAAGCTCACGATA",4,99.81,10.75,-0.09,0.06,2.89,1.13,0,">1 nonsynonymous","A18S K114S",2
"lib2","SARS-CoV-2","CGATAAGGCTGTACCT",6,199.96,10.74,-0.09,0.07,2.77,1.13,0,"1 nonsynonymous","A190S",1
"lib2","SARS-CoV-2","CGATAAGGTGAGGCAT",7,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V I104D",2
"lib2","SARS-CoV-2","CGATAATAACCTAGTC",5,26.48,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3H D68M Y91H",3
"lib2","SARS-CoV-2","CGATAATAGTAACAAA",6,174.49,10.1,-0.74,0.05,2.66,1.02,0,"1 nonsynonymous","S19T",1
"lib2","SARS-CoV-2","CGATAATCCGTCTATA",8,105.51,10.81,-0.03,0.04,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATAATGACAGCAGG",3,23.12,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V11R D34R L95V G152S",4
"lib2","SARS-CoV-2","CGATACAAAAATATAT",14,1.81,NA,NA,NA,NA,NA,NA,"stop","N13V A33* K87A",3
"lib2","SARS-CoV-2","CGATACAACAAATAAC",6,29.47,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G101I D112G G116A",3
"lib2","SARS-CoV-2","CGATACAACATAACCC",3,20.03,9.01,-1.83,0.47,1.5,1.06,0.07,">1 nonsynonymous","T55G Q84R W106K S184M",4
"lib2","SARS-CoV-2","CGATACAAGCTCATTG",7,119.75,9.15,-1.69,0.12,1.5,1.08,0.01,">1 nonsynonymous","N4S A22F N40R L162M",4
"lib2","SARS-CoV-2","CGATACACATACAGGT",4,28.58,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","W23R L57A G86K S139Q A145C V181G",6
"lib2","SARS-CoV-2","CGATACAGGCAATATA",5,62.39,10.1,-0.74,0.05,2.74,1.1,0,">1 nonsynonymous","T55N Q79H",2
"lib2","SARS-CoV-2","CGATACATAAGTAAAC",5,99.75,10.11,-0.72,0.06,2.54,1.06,0,"1 nonsynonymous","C102L",1
"lib2","SARS-CoV-2","CGATACATAGTGATGG",3,19.43,9.91,-0.93,0.43,1.5,1,0.07,">1 nonsynonymous","R16T N24K S69W S139C P149L",5
"lib2","SARS-CoV-2","CGATACATGTAACACC",6,50.02,6.65,-4.19,0.46,1.5,1.12,0.03,">1 nonsynonymous","K87I W106R G155Y Q168P",4
"lib2","SARS-CoV-2","CGATACATTATCCGAT",1,6.1,6.92,-3.91,0.61,1.5,1.28,0.04,">1 nonsynonymous","V37T F47Y P82T K114T S200R",5
"lib2","SARS-CoV-2","CGATACATTGCACTCC",10,232.94,8.1,-2.74,0.12,1.59,1.11,0.01,">1 nonsynonymous","A14Q R27M V115G Y121V",4
"lib2","SARS-CoV-2","CGATACCAATTTTCGA",8,94.18,9.74,-1.09,0.06,2.59,1.04,0,">1 nonsynonymous","F44C P149I",2
"lib2","SARS-CoV-2","CGATACCACATTCATT",1,98.01,10.24,-0.59,0.08,2.34,1.07,0,">1 nonsynonymous","L5V R127S Q163Y",3
"lib2","SARS-CoV-2","CGATACCCCACATGCT",6,67.43,6.17,-4.67,0.69,1.5,1.22,0.01,">1 nonsynonymous","C61S P82Y S184F",3
"lib2","SARS-CoV-2","CGATACCCGTGAATTA",9,114.69,8.99,-1.85,0.07,2.78,1.06,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","CGATACCGCTTGGTTA",12,1.11,NA,NA,NA,NA,NA,NA,"stop","V37* T140C F160Y V180R",4
"lib2","SARS-CoV-2","CGATACGCTAAACGTC",2,32.62,9.75,-1.08,0.16,2.25,1,0.01,">1 nonsynonymous","R127N K198Q",2
"lib2","SARS-CoV-2","CGATACGGACAAAGTC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P G116V F156M",3
"lib2","SARS-CoV-2","CGATACGTACATTAAT",10,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N13V S45G D90E V173A V182F T201A",7
"lib2","SARS-CoV-2","CGATACGTGATTGTAC",18,8.81,9.97,-0.86,0.21,2.54,1.2,0.01,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","CGATACGTTGGGCAGG",7,78.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10V L38H G86C I88M",4
"lib2","SARS-CoV-2","CGATACTAAAAGTGAT",1,14.66,9.31,-1.53,0.13,1.8,1.04,0.02,">1 nonsynonymous","S69R T100S V153L",3
"lib2","SARS-CoV-2","CGATACTAAAGATGAA",8,152.12,10.07,-0.77,0.05,2.75,1.05,0,">1 nonsynonymous","C31R T63V",2
"lib2","SARS-CoV-2","CGATACTAATATTAAG",2,14.83,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C61G V103K P133S",3
"lib2","SARS-CoV-2","CGATACTAGTAACCAC",5,39.54,10.93,0.1,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATACTATGCACGCA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","G116S Q168*",2
"lib2","SARS-CoV-2","CGATACTCACGCCCGA",4,25.33,10.35,-0.48,0.11,2.78,1.23,0,">1 nonsynonymous","A42S T55A G116Q",3
"lib2","SARS-CoV-2","CGATACTCTCCCATAG",7,105.96,8.78,-2.06,0.09,2.92,1.12,0,"1 nonsynonymous","G166Y",1
"lib2","SARS-CoV-2","CGATACTGAGTCAATG",4,6.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46N G152W",2
"lib2","SARS-CoV-2","CGATAGAAAACTAATG",17,95.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G G51W T201S",3
"lib2","SARS-CoV-2","CGATAGAACAATACCT",5,19.29,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","R27E L162G S200C",3
"lib2","SARS-CoV-2","CGATAGAAGAGTTTAA",7,45.96,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D90E L95Q",2
"lib2","SARS-CoV-2","CGATAGACATTCAATG",11,134.16,10.07,-0.76,0.04,2.78,1.09,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","CGATAGACGAAAACGT",8,1.48,NA,NA,NA,NA,NA,NA,"stop","F12L Y123* G146Y",3
"lib2","SARS-CoV-2","CGATAGACGGTAATCC",1,12.85,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y66A L162S C195R",3
"lib2","SARS-CoV-2","CGATAGAGATGGTGCT",7,166.61,10.79,-0.05,0.04,2.94,1.07,0,"1 nonsynonymous","S36G",1
"lib2","SARS-CoV-2","CGATAGATATTAAATA",3,29.59,10.67,-0.16,0.04,2.86,1.11,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","CGATAGCCACATAATA",3,1.07,NA,NA,NA,NA,NA,NA,"stop","S113* F160V",2
"lib2","SARS-CoV-2","CGATAGCGACGCAATT",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A Y50R C102S N157S",4
"lib2","SARS-CoV-2","CGATAGCGCACTCTAC",1,95.51,9.68,-1.16,0.07,2.57,1.11,0,">1 nonsynonymous","L5K S43R K132I G146W",4
"lib2","SARS-CoV-2","CGATAGCGGACCAAGT",9,29.48,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","L5F S41Y T100A E141V N157Y",5
"lib2","SARS-CoV-2","CGATAGCGTGTCTAAA",3,70.77,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","P133Y T140L G146V R179S T201I",5
"lib2","SARS-CoV-2","CGATAGCTCTAATGAT",7,2.96,NA,NA,NA,NA,NA,NA,"stop","I2* K128T",2
"lib2","SARS-CoV-2","CGATAGCTCTACATCT",14,79.09,6,-4.84,2,3,1.24,0,">1 nonsynonymous","V20M G152F",2
"lib2","SARS-CoV-2","CGATAGGAAGTTAGAA",5,64.23,10.08,-0.76,0.06,2.89,1.03,0,"1 nonsynonymous","L125C",1
"lib2","SARS-CoV-2","CGATAGGGACTCTCCA",14,39.12,6,-4.84,1.72,1.5,1.28,0.03,">1 nonsynonymous","R27T V103W V182F",3
"lib2","SARS-CoV-2","CGATAGTACGAAATAT",7,78.45,9.98,-0.85,0.1,2.52,1.03,0,">1 nonsynonymous","A22E P133I",2
"lib2","SARS-CoV-2","CGATAGTACGTCAAAC",1,2.05,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGATAGTCTCACTACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K W23S V52Y Y178H",4
"lib2","SARS-CoV-2","CGATAGTTCCTTAATC",1,10.26,10.72,-0.11,0.1,2.71,1.29,0.01,"synonymous","",0
"lib2","SARS-CoV-2","CGATATAAATAAATAG",2,143.01,9.28,-1.56,0.07,2.32,1.1,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","CGATATAAATCAAGCT",3,0.77,NA,NA,NA,NA,NA,NA,"stop","G101C G117N R124* L187H",4
"lib2","SARS-CoV-2","CGATATACCAAATAGA",4,25.02,8.71,-2.13,0.17,1.55,1.07,0.01,">1 nonsynonymous","P96R F134K",2
"lib2","SARS-CoV-2","CGATATAGCAGAATCT",11,124.96,10.51,-0.32,0.06,2.9,1.11,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","CGATATAGCTGAGATG",3,48.17,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D34S T63V D97L Y159G Y178D",5
"lib2","SARS-CoV-2","CGATATCATAACTTGA",6,52.26,9.62,-1.21,0.08,1.9,1.06,0,">1 nonsynonymous","S129K D137N",2
"lib2","SARS-CoV-2","CGATATCATGAGACGA",3,4.14,NA,NA,NA,NA,NA,NA,"stop","C6* I28K N157A",3
"lib2","SARS-CoV-2","CGATATCCTCCGATCT",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N F44I I104Q",3
"lib2","SARS-CoV-2","CGATATCTAATGATTG",1,5.04,10.67,-0.17,0.13,3,1.03,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","CGATATCTAGGAGCGG",1,9.34,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","Y93I F185V S200L",3
"lib2","SARS-CoV-2","CGATATGAATCATACG",2,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Q N151P",2
"lib2","SARS-CoV-2","CGATATGAGGACTGAT",6,172.03,10.81,-0.02,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATATGCAAGAGTGG",12,170.4,9.67,-1.17,0.07,2.21,1.05,0,"1 nonsynonymous","V11D",1
"lib2","SARS-CoV-2","CGATATGTAATTTTTA",8,110.48,10.13,-0.71,0.05,2.56,1.05,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CGATATTAACGTATCG",7,75.07,9.71,-1.12,0.09,2.51,1.05,0,">1 nonsynonymous","A33L K56F G155C K198Y",4
"lib2","SARS-CoV-2","CGATATTACGATATAC",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A105H",2
"lib2","SARS-CoV-2","CGATATTCTCCACCTC",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F T55L T63A R136Y N157K K198R",6
"lib2","SARS-CoV-2","CGATATTGAATAATAC",8,45.42,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E10L L95N S113W S139Y Q168R",5
"lib2","SARS-CoV-2","CGATATTTACATCTCT",4,17.36,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N92L G116D T201A",3
"lib2","SARS-CoV-2","CGATATTTTCCTCCTA",1,9.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2V F8Q L122V N151K Q168E V180I",6
"lib2","SARS-CoV-2","CGATCAAACCGCTCCA",13,61.78,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1M V37P K48T R179G",4
"lib2","SARS-CoV-2","CGATCAAAGAAGTAAC",1,1.02,NA,NA,NA,NA,NA,NA,"stop","K87V Y93H Y119*",3
"lib2","SARS-CoV-2","CGATCAACACTTTCAT",3,45.77,10.34,-0.49,0.04,2.95,1.04,0,"1 nonsynonymous","G152V",1
"lib2","SARS-CoV-2","CGATCAACTATAAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41* T85A L183D",3
"lib2","SARS-CoV-2","CGATCAAGCAGATGAG",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119R C158S",2
"lib2","SARS-CoV-2","CGATCAAGTACGCGAA",10,1.73,NA,NA,NA,NA,NA,NA,"stop","R25* V37T G51S T201R",4
"lib2","SARS-CoV-2","CGATCAAGTCTAACAC",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N C49H S139N G174L",4
"lib2","SARS-CoV-2","CGATCAAGTCTAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","CGATCAAGTGCAAATA",11,217.57,10.72,-0.12,0.04,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","CGATCACAACCTTGAC",3,25.56,10.06,-0.78,0.14,2.52,1,0.01,">1 nonsynonymous","S41N N58Y A67L D98M N120V E141S",6
"lib2","SARS-CoV-2","CGATCACATACAAACA",4,16.33,10.77,-0.07,0.11,2.83,1.17,0,"1 nonsynonymous","Q144A",1
"lib2","SARS-CoV-2","CGATCACTCTCCGGAG",1,15.69,6.06,-4.78,0.87,1.5,1.16,0.02,">1 nonsynonymous","N40L I104S E135A",3
"lib2","SARS-CoV-2","CGATCAGAACGATTAA",1,4.55,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGATCAGACTACTTCC",4,137.84,10.88,0.05,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATCAGATATTAGCA",2,15.81,9.33,-1.5,0.23,1.64,1.13,0.03,">1 nonsynonymous","K94N I104T S184N",3
"lib2","SARS-CoV-2","CGATCAGCCCTTACAG",2,16.12,10.67,-0.17,0.05,2.93,1.08,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","CGATCAGCGATGGCTA",6,43.85,6.67,-4.17,0.25,1.5,1.09,0.01,">1 nonsynonymous","E76C I88F",2
"lib2","SARS-CoV-2","CGATCAGTAAAATATC",7,63.7,9.73,-1.11,0.05,2.94,1.08,0,">1 nonsynonymous","F156H T170S",2
"lib2","SARS-CoV-2","CGATCATATGATAATG",2,19.91,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G9K K94P P133W",3
"lib2","SARS-CoV-2","CGATCATATGATTTCT",5,101.96,8.21,-2.62,0.15,2.04,1.02,0.01,">1 nonsynonymous","T55D D112N",2
"lib2","SARS-CoV-2","CGATCATATGTATAAT",2,36.75,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A81Q D112S R124P",3
"lib2","SARS-CoV-2","CGATCATGACCTCGAC",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101E C158D",2
"lib2","SARS-CoV-2","CGATCATGAGGCAAGA",4,56.81,10.82,-0.02,0.08,2.8,1.08,0,"1 nonsynonymous","T3P",1
"lib2","SARS-CoV-2","CGATCATTACAATGGA",2,36.22,8.74,-2.09,0.21,1.5,1.03,0.02,"1 nonsynonymous","F134P",1
"lib2","SARS-CoV-2","CGATCATTCTCATGCC",6,8.48,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","S43L D90S F160M V182F",4
"lib2","SARS-CoV-2","CGATCCAAATCCAAAT",3,35.53,10.61,-0.23,0.05,2.95,1.05,0,">1 nonsynonymous","E10V F160S",2
"lib2","SARS-CoV-2","CGATCCAACAGCACTT",10,105.34,10.25,-0.59,0.05,2.75,1.06,0,">1 nonsynonymous","T3R N64P",2
"lib2","SARS-CoV-2","CGATCCAACGAGATTA",10,77.81,9.62,-1.21,0.06,2.8,1.06,0,">1 nonsynonymous","S45M L60I K87N T148K",4
"lib2","SARS-CoV-2","CGATCCAAGCTATAAT",6,91.23,10.13,-0.71,0.06,2.6,1.06,0,">1 nonsynonymous","T3V S43D K56P",3
"lib2","SARS-CoV-2","CGATCCAATTCAGTCC",9,42.31,9.64,-1.19,0.31,1.5,1.02,0.06,">1 nonsynonymous","D90C A105F",2
"lib2","SARS-CoV-2","CGATCCACCTAAACAA",2,12.42,10.18,-0.65,0.22,2.31,1,0.01,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","CGATCCAGTGAATATA",4,29.99,10.83,-0.01,0.06,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATCCCACGCAAAGC",13,2.01,NA,NA,NA,NA,NA,NA,"stop","P7V C61S Q168*",3
"lib2","SARS-CoV-2","CGATCCCATAGGCCCT",2,26.5,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14S V77E L125S C150R",4
"lib2","SARS-CoV-2","CGATCCCCCTTCCCCG",2,5.82,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","W23C I28E C102R T170C",4
"lib2","SARS-CoV-2","CGATCCCTATACGTCA",4,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123V Q176I",2
"lib2","SARS-CoV-2","CGATCCCTATGGACCG",8,112.88,9.83,-1,0.08,2.17,1.12,0,">1 nonsynonymous","E10M S36K D98C",3
"lib2","SARS-CoV-2","CGATCCCTCTGACGAG",16,239.69,10.83,-0.01,0.04,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","CGATCCGCGCGTTGAA",2,64.66,10.77,-0.06,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATCCGTAGTAACCA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T G86H",2
"lib2","SARS-CoV-2","CGATCCTGCTTCCTGG",5,63.99,8.68,-2.15,0.14,1.5,1.03,0.01,">1 nonsynonymous","F17C K26W",2
"lib2","SARS-CoV-2","CGATCCTGTTAGTAGG",2,28.87,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N4R T85M T100N V153T R179M",5
"lib2","SARS-CoV-2","CGATCGAGATTACTGG",3,16.29,6.42,-4.42,0.67,1.5,1.18,0.02,">1 nonsynonymous","N1G P82Q Y123R",3
"lib2","SARS-CoV-2","CGATCGCAATGCGTCC",4,97.79,10.58,-0.26,0.06,2.85,1.05,0,">1 nonsynonymous","R27L S139R",2
"lib2","SARS-CoV-2","CGATCGCATTCAAAAG",14,137.57,6.15,-4.68,0.73,1.5,1.19,0.02,">1 nonsynonymous","D34R T46R R127S T140D",4
"lib2","SARS-CoV-2","CGATCGCCAAAAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R I72T D112A I138Q F156S",5
"lib2","SARS-CoV-2","CGATCGCTCATTTATC",3,33.06,10.09,-0.75,0.13,2.59,1.08,0.01,">1 nonsynonymous","V11Y P149L",2
"lib2","SARS-CoV-2","CGATCGGAATTGATCT",16,98.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N24M Y50V T85V Y93C V173K T201K",6
"lib2","SARS-CoV-2","CGATCGGTTTCCATAT",1,15.58,10.2,-0.64,0.1,2.77,1.1,0.01,">1 nonsynonymous","I2V A14I N151S",3
"lib2","SARS-CoV-2","CGATCGTTAAATTGAC",10,64.03,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F44C D90I R127M",3
"lib2","SARS-CoV-2","CGATCTAAAGGAAAAG",3,30.98,10.84,0.01,0.06,2.98,1.05,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","CGATCTAACACGCGAA",20,230.39,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F44E Y93D P133L Q168T S184T",5
"lib2","SARS-CoV-2","CGATCTAAGACATATT",3,25.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G101I D112G G116A",3
"lib2","SARS-CoV-2","CGATCTACAGTAAAAG",4,43,8.45,-2.39,0.11,2.73,1.1,0,"1 nonsynonymous","Y143N",1
"lib2","SARS-CoV-2","CGATCTACCCACAGAG",3,28.35,6.41,-4.43,0.44,1.5,1.2,0.02,">1 nonsynonymous","Y91L A105V G166R",3
"lib2","SARS-CoV-2","CGATCTATCCCATTGT",9,2.48,NA,NA,NA,NA,NA,NA,"stop","T100F S113F Y119*",3
"lib2","SARS-CoV-2","CGATCTCATTAAATAA",2,34.51,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F70L L125V Y165C V173S",4
"lib2","SARS-CoV-2","CGATCTCTAAGAAAGT",12,76.22,10.75,-0.09,0.04,3,1.02,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","CGATCTCTATTTCTAC",5,30.9,10.97,0.14,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATCTCTGGATCGTT",11,21.35,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","Y50S V103K Y123V N130P",4
"lib2","SARS-CoV-2","CGATCTGTGCTATTCG",4,47.49,9.49,-1.35,0.11,1.79,1.05,0.01,">1 nonsynonymous","S43L D98V N107S Q144S F160Q",5
"lib2","SARS-CoV-2","CGATCTGTTCCAATGC",1,23.08,9.71,-1.12,0.11,2.29,1.01,0.01,">1 nonsynonymous","C61R T100K S139I",3
"lib2","SARS-CoV-2","CGATCTTCAGTACAAA",18,0.69,NA,NA,NA,NA,NA,NA,"stop","Y91* K132Q",2
"lib2","SARS-CoV-2","CGATGAAAAAACCAAT",9,41.83,8.99,-1.84,0.34,1.5,1,0.04,"1 nonsynonymous","V181Y",1
"lib2","SARS-CoV-2","CGATGAAACCCTAGAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","D34F G51F Q168* P197V",4
"lib2","SARS-CoV-2","CGATGAAAGGTCATTA",1,13.5,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","N4I F44S N107Y N120S",4
"lib2","SARS-CoV-2","CGATGAAATCCGGCTA",10,0.66,NA,NA,NA,NA,NA,NA,"stop","N1* G51F Y66E I104A",4
"lib2","SARS-CoV-2","CGATGAACGGAGTCCT",1,13.56,6.37,-4.47,0.76,1.5,1.08,0.05,">1 nonsynonymous","Q84R N107A E154K G172Y",4
"lib2","SARS-CoV-2","CGATGAACGTAGACTT",2,39.91,10.47,-0.37,0.09,2.92,1.03,0,">1 nonsynonymous","T100F S129F P149F F160A",4
"lib2","SARS-CoV-2","CGATGAACTAGAATAA",7,210.47,9.65,-1.19,0.05,2.28,1.03,0,"1 nonsynonymous","Y178E",1
"lib2","SARS-CoV-2","CGATGAATTTCGTAGT",5,109.72,8.71,-2.12,0.08,2.8,1.12,0,">1 nonsynonymous","P7H D97R Y119W",3
"lib2","SARS-CoV-2","CGATGACCTCTTAGTA",3,42.36,10.67,-0.17,0.08,2.8,1.08,0,">1 nonsynonymous","N64R S139D",2
"lib2","SARS-CoV-2","CGATGACGTATAGACA",2,4.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106C",1
"lib2","SARS-CoV-2","CGATGACTCGTTAACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A S41I K48S G74V V181A",5
"lib2","SARS-CoV-2","CGATGAGAACATAAAA",2,19.99,9.9,-0.93,0.17,2.12,1.02,0.01,"1 nonsynonymous","R136G",1
"lib2","SARS-CoV-2","CGATGAGAATCTATAG",3,0.06,NA,NA,NA,NA,NA,NA,"stop","S69* W106T E141Q Q163R",4
"lib2","SARS-CoV-2","CGATGATAACATAGAA",3,34.75,6.87,-3.97,0.3,1.5,1.06,0.02,">1 nonsynonymous","A18R D98F A145L",3
"lib2","SARS-CoV-2","CGATGATAAGTTACCC",7,97.49,9.19,-1.65,0.07,2.1,1.05,0,">1 nonsynonymous","T100C Y165L",2
"lib2","SARS-CoV-2","CGATGATAATATAACC",11,170.96,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I88T S108L Y121K I142D G174R",5
"lib2","SARS-CoV-2","CGATGCACCAATGGAT",17,256.69,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A105S K114A Y165E T201Y",4
"lib2","SARS-CoV-2","CGATGCAGTATCCATA",1,25.86,10.72,-0.12,0.09,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATGCATCAACAACA",1,25.64,10.42,-0.42,0.05,3,1.02,0,">1 nonsynonymous","Y35V T55K E186H",3
"lib2","SARS-CoV-2","CGATGCCTGCCCTGGC",18,237.73,10.78,-0.05,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATGCGATAATGTTT",11,144.89,10.41,-0.42,0.03,2.89,1.1,0,">1 nonsynonymous","V32C G83M S147I",3
"lib2","SARS-CoV-2","CGATGCGCTGGTGGAG",7,91.03,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P54R Y93A P161R",3
"lib2","SARS-CoV-2","CGATGCGGGCGAATGA",5,24.29,7.79,-3.05,0.2,1.5,1.06,0.02,">1 nonsynonymous","F44L N107G G116L",3
"lib2","SARS-CoV-2","CGATGCGTGGCAAATA",15,82.31,9.84,-1,0.08,2.65,1.07,0,">1 nonsynonymous","A42S N107D S147P",3
"lib2","SARS-CoV-2","CGATGCGTTTAGCAAA",8,40.42,6,-4.84,2,1.5,1.24,0.05,"1 nonsynonymous","C102Q",1
"lib2","SARS-CoV-2","CGATGCTCATGTATCA",1,43.4,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22P K94A Y123C F167Y",4
"lib2","SARS-CoV-2","CGATGGAACGAAAGGT",3,39.89,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","K48F T63S A89R V103T",4
"lib2","SARS-CoV-2","CGATGGAATATAATGC",3,7.02,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","I2V N13R Y35R A81D I88K G116R L131P T201D",8
"lib2","SARS-CoV-2","CGATGGACTGTTTATA",6,165.19,10.74,-0.1,0.07,2.83,1.11,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","CGATGGAGTTTAAGAA",1,12.21,8.51,-2.32,0.33,1.5,1.1,0.05,">1 nonsynonymous","G9V D137T",2
"lib2","SARS-CoV-2","CGATGGATTTAGCAAT",11,58.02,9.51,-1.33,0.1,2.68,1.16,0,">1 nonsynonymous","V32A N130K Q168E",3
"lib2","SARS-CoV-2","CGATGGCACAAAACGA",2,37.38,6,-4.84,2,2.21,1.13,0.01,">1 nonsynonymous","G51C S113H S139I E141G",4
"lib2","SARS-CoV-2","CGATGGCACGGTCCAT",1,8.31,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","V11P C49S",2
"lib2","SARS-CoV-2","CGATGGCAGCTGGGAC",2,6.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89E E141A Q168Y",3
"lib2","SARS-CoV-2","CGATGGCATAGATAAC",4,119.46,10.91,0.07,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATGGCGACTCAAAA",7,89.38,10.78,-0.05,0.04,2.99,1.05,0,"1 nonsynonymous","A192T",1
"lib2","SARS-CoV-2","CGATGGCTCCGTTGGT",2,9.13,6,-4.84,2,3,1.12,0.02,">1 nonsynonymous","D34A Q168P",2
"lib2","SARS-CoV-2","CGATGGGTAAAGTATT",2,35.08,9.59,-1.25,0.12,2.43,1.04,0,">1 nonsynonymous","T85L L183F",2
"lib2","SARS-CoV-2","CGATGGGTAGGAGTAA",2,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L D90R P133M A190T",4
"lib2","SARS-CoV-2","CGATGGTCTATTTCCG",3,16.28,9.07,-1.77,0.19,1.5,1,0.02,">1 nonsynonymous","K56L P96S Y178S",3
"lib2","SARS-CoV-2","CGATGTACAGTAATAG",9,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87T Y119V",2
"lib2","SARS-CoV-2","CGATGTACGCAAATAC",2,5.94,10.81,-0.02,0.19,2.73,1.2,0.01,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","CGATGTAGAATAAATG",1,5.53,8.68,-2.16,0.13,2.09,1,0.01,">1 nonsynonymous","F12N V32I",2
"lib2","SARS-CoV-2","CGATGTCACGATTGCA",6,118.5,6.74,-4.09,0.17,1.96,1.19,0,">1 nonsynonymous","P149I C158H",2
"lib2","SARS-CoV-2","CGATGTCTGATAATGG",3,69.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51F C102S F126A",3
"lib2","SARS-CoV-2","CGATGTGACCCACGCA",2,6.8,9,-1.84,0.18,2.38,1,0.02,">1 nonsynonymous","S19P D112E",2
"lib2","SARS-CoV-2","CGATGTGGAATCAAGA",3,11.86,8.31,-2.52,0.49,1.5,1,0.06,">1 nonsynonymous","S53P P96W",2
"lib2","SARS-CoV-2","CGATGTGTAAGTATAG",18,69.24,9.23,-1.61,0.13,2.04,1.09,0.01,">1 nonsynonymous","F47G C61A",2
"lib2","SARS-CoV-2","CGATGTTATCGTGTGA",1,19.53,9.56,-1.27,0.07,2.97,1.05,0,"1 nonsynonymous","Q168V",1
"lib2","SARS-CoV-2","CGATGTTATTAAACAC",1,45.47,8.86,-1.97,0.08,2.96,1.05,0,">1 nonsynonymous","L5E C61V I138R T148I T170N",5
"lib2","SARS-CoV-2","CGATGTTTGTACTCTA",1,8.32,6.91,-3.92,2,1.5,1.09,0.01,">1 nonsynonymous","A105P L122Y G152I",3
"lib2","SARS-CoV-2","CGATGTTTGTGCCATA",2,21.57,10.42,-0.42,0.04,2.97,1.03,0,">1 nonsynonymous","S41T T170Q",2
"lib2","SARS-CoV-2","CGATTAAAACATGATG",1,27.76,9.68,-1.16,0.11,2.08,1.18,0.01,">1 nonsynonymous","F12L Y35S S53E Q79M",4
"lib2","SARS-CoV-2","CGATTAAAATCCTACA",5,13.05,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V37Q L60W Q84H V103Q K114Y",5
"lib2","SARS-CoV-2","CGATTAAACACCGAGG",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R T63G W106L S113M",4
"lib2","SARS-CoV-2","CGATTAACCTCCCATG",2,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y G86R",2
"lib2","SARS-CoV-2","CGATTAAGGAAGCTCA",12,73.76,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A18M C61S R127L P149F",4
"lib2","SARS-CoV-2","CGATTAATAACTCTAC",4,36.14,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V77E G86K G196T",3
"lib2","SARS-CoV-2","CGATTACATATACCTG",3,72.91,10.63,-0.2,0.04,2.95,1.07,0,"1 nonsynonymous","K128W",1
"lib2","SARS-CoV-2","CGATTACATGAAGATT",1,0.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","CGATTACCGGATCATG",1,20.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39M N92K L122C Y178S",4
"lib2","SARS-CoV-2","CGATTACGTCCGGAGC",3,45.2,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5E G172V",2
"lib2","SARS-CoV-2","CGATTACTAGTGTTAC",1,5.28,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T3R V11N R25M Y178V",4
"lib2","SARS-CoV-2","CGATTACTTATTATCA",6,34.25,6.24,-4.6,1.4,1.5,1.21,0.06,">1 nonsynonymous","E10F W106V F134N V153I",4
"lib2","SARS-CoV-2","CGATTAGAAAATTATT",7,1.9,NA,NA,NA,NA,NA,NA,"stop","C49* W106* S113W S147T",4
"lib2","SARS-CoV-2","CGATTAGAAATTTAAT",1,5.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47T G116R N130L V180W",4
"lib2","SARS-CoV-2","CGATTAGACTGGCCGC",7,160.38,10.14,-0.69,0.04,2.8,1.12,0,"1 nonsynonymous","Y178I",1
"lib2","SARS-CoV-2","CGATTAGATGAACCAA",6,16.79,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G86K V115K K132H L183K",4
"lib2","SARS-CoV-2","CGATTAGCGATATATT",7,95.43,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G51I I72C D90T A190S",4
"lib2","SARS-CoV-2","CGATTAGGAAATCGAA",4,2.7,NA,NA,NA,NA,NA,NA,"stop","F62H E76T P96H T140S S164D P177*",6
"lib2","SARS-CoV-2","CGATTAGTCAGAAAAA",7,26.33,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G9E P82V F99C",3
"lib2","SARS-CoV-2","CGATTAGTGATTTAAG",6,67.2,10.86,0.02,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATTAGTTACGTGCA",11,187.1,9.83,-1.01,0.04,2.88,1.07,0,">1 nonsynonymous","L60H N118S",2
"lib2","SARS-CoV-2","CGATTATAAGCCGGGT",9,142.71,10.12,-0.72,0.08,2.59,1.01,0,">1 nonsynonymous","G9V F17M T201I",3
"lib2","SARS-CoV-2","CGATTATAATGACCCT",2,54.59,8.54,-2.29,0.08,3,1.06,0,">1 nonsynonymous","L125P N151L F156M",3
"lib2","SARS-CoV-2","CGATTATAATGTGAAC",2,10.36,6,-4.84,2,3,1.16,0.03,">1 nonsynonymous","P54L V103Y G146W",3
"lib2","SARS-CoV-2","CGATTATACTTTTGAT",9,52.92,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I2S S45L C102S N120F R136T F156T",6
"lib2","SARS-CoV-2","CGATTATAGATCAATG",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137F E154W S184Y",3
"lib2","SARS-CoV-2","CGATTATATAATAACC",2,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S A67D P82L T100C P149S F160N",6
"lib2","SARS-CoV-2","CGATTATCTACATACC",3,43.71,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N4M S29I C49T S69K G83Y S200T",6
"lib2","SARS-CoV-2","CGATTATGGTACTGCC",8,75.92,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S36V C49Y Q168P",3
"lib2","SARS-CoV-2","CGATTCAAAATACTAA",6,19.75,9.63,-1.2,0.1,1.87,1.02,0,">1 nonsynonymous","G9H P96L",2
"lib2","SARS-CoV-2","CGATTCAACAACGCTA",10,114.39,10.44,-0.4,0.04,2.95,1.05,0,">1 nonsynonymous","G174M T201I",2
"lib2","SARS-CoV-2","CGATTCAATATGCGCA",1,8.37,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K48C I88W G152Y",3
"lib2","SARS-CoV-2","CGATTCACAATTAACT",2,13.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A22V G51D D137T",3
"lib2","SARS-CoV-2","CGATTCACCACGTGCC",4,61.52,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I2K Y165D R179G",3
"lib2","SARS-CoV-2","CGATTCCATGCAATGT",6,93.67,10.37,-0.47,0.05,2.9,1.03,0,">1 nonsynonymous","S36H F47L",2
"lib2","SARS-CoV-2","CGATTCCCAAGCTCGA",7,102.23,9.67,-1.16,0.08,2,1.07,0,">1 nonsynonymous","V77F K132R",2
"lib2","SARS-CoV-2","CGATTCCCTAAAATAA",1,8.63,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","T46G L95F V115W K132C C150T",5
"lib2","SARS-CoV-2","CGATTCCTGAGCAACC",1,48.26,10.79,-0.05,0.12,2.85,1.03,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGATTCGGCAACGTAA",9,76.56,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T46D R73L L95W Y143S",4
"lib2","SARS-CoV-2","CGATTCGTAGGGCACT",3,92.57,10.18,-0.66,0.04,2.91,1.02,0,">1 nonsynonymous","F12L L60G",2
"lib2","SARS-CoV-2","CGATTCGTATCCGACG",21,197.58,9.81,-1.03,0.05,2.13,1.05,0,">1 nonsynonymous","E10R Y91I",2
"lib2","SARS-CoV-2","CGATTCTAATATATCT",4,87.47,10.85,0.02,0.04,2.89,1.1,0,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","CGATTGAACACTGCAG",7,32.12,7.92,-2.92,0.35,1.8,1.12,0.04,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","CGATTGACATACTATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29F Y66D T85R",3
"lib2","SARS-CoV-2","CGATTGATATAACCAA",14,103.14,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","CGATTGATCTACGTAC",4,51.31,9.97,-0.87,0.1,2.3,1.05,0,">1 nonsynonymous","G9W V52Q",2
"lib2","SARS-CoV-2","CGATTGATGTGTCCTA",4,10.26,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","E10H F70I Q84N R127S S147F",5
"lib2","SARS-CoV-2","CGATTGGAAAAAGAAA",6,76.08,10.44,-0.4,0.06,2.94,1.02,0,"1 nonsynonymous","G152V",1
"lib2","SARS-CoV-2","CGATTGGCGTCTTCGG",5,143.13,10.75,-0.09,0.04,2.96,1.05,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","CGATTTAAAATTGTCA",9,117.83,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T3L R16Q V37M D90K Y123N E154W Q176F",7
"lib2","SARS-CoV-2","CGATTTAACAGGAAAC",4,13.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A81V C102V S113I T148W",4
"lib2","SARS-CoV-2","CGATTTAACGGTAGCT",3,44.36,6,-4.84,2,3,1.2,0,">1 nonsynonymous","F99Y L122R P161L",3
"lib2","SARS-CoV-2","CGATTTAACGTGGCAC",4,9.16,9.61,-1.23,0.2,1.99,1.13,0.02,">1 nonsynonymous","I2W V20T N64Y",3
"lib2","SARS-CoV-2","CGATTTACACATTGGG",8,131.49,7.89,-2.95,0.16,1.64,1.09,0.01,">1 nonsynonymous","N107L S129R P169S",3
"lib2","SARS-CoV-2","CGATTTACGAGATTAA",5,0.31,NA,NA,NA,NA,NA,NA,"stop","W23L A105* L125K G146R G155Y T201V",6
"lib2","SARS-CoV-2","CGATTTACTAGATCCC",1,13.67,10.77,-0.06,0.09,2.92,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CGATTTACTTAAATCG",6,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Q C102K",2
"lib2","SARS-CoV-2","CGATTTAGGATGGTGA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","E10* Y50L D90I C102F S129I",5
"lib2","SARS-CoV-2","CGATTTATAACTAAGA",7,77.78,6.76,-4.08,0.41,1.5,1.1,0.03,">1 nonsynonymous","R27M N157I",2
"lib2","SARS-CoV-2","CGATTTATGGTGGCTG",10,121.16,9.9,-0.94,0.11,2.17,1.03,0,">1 nonsynonymous","S36D P133L",2
"lib2","SARS-CoV-2","CGATTTATTATGACTT",9,169.62,10.84,0.01,0.05,2.79,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGATTTCATTGTATAG",3,138.16,10.77,-0.07,0.02,2.98,1.02,0,">1 nonsynonymous","G9S A42I T201A",3
"lib2","SARS-CoV-2","CGATTTCGGGTAGAAT",12,74.31,6,-4.84,1.15,1.5,1.17,0.01,">1 nonsynonymous","T3M F8L G51I D59V Y121L R136L",6
"lib2","SARS-CoV-2","CGATTTCTGTTCGTAC",3,65.04,6.92,-3.92,0.22,1.56,1.17,0.01,">1 nonsynonymous","Y143F V182L",2
"lib2","SARS-CoV-2","CGATTTGAAATCTTAT",1,10.05,9.76,-1.08,0.13,2.39,1,0.01,">1 nonsynonymous","F8V F47M K198S",3
"lib2","SARS-CoV-2","CGATTTGAAGCAACGG",3,76.65,9.31,-1.53,0.06,1.82,1.04,0,">1 nonsynonymous","G9L L38V W106I",3
"lib2","SARS-CoV-2","CGATTTGCGACTTATC",3,0,NA,NA,NA,NA,NA,NA,"stop","F12A S36W F47V E141Y Y175*",5
"lib2","SARS-CoV-2","CGATTTGGGAACAATC",7,16.11,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A81T D112S P169R G174L",4
"lib2","SARS-CoV-2","CGATTTGTTTTATAGT",4,54,9.89,-0.94,0.08,2.21,1.09,0,">1 nonsynonymous","Y35E F44V",2
"lib2","SARS-CoV-2","CGATTTTTCTCACGTT",7,91.39,9.65,-1.19,0.07,1.99,1.03,0,">1 nonsynonymous","R25H S139C",2
"lib2","SARS-CoV-2","CGATTTTTGACGAACA",1,18.08,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49V Y175V",2
"lib2","SARS-CoV-2","CGCAAAAAAGCCTCAC",3,59.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I28Y K87T V103M A145S C158K",5
"lib2","SARS-CoV-2","CGCAAAAACAACTATG",2,7.12,8.99,-1.84,0.21,1.5,1,0.02,">1 nonsynonymous","G9V F17D A67V",3
"lib2","SARS-CoV-2","CGCAAAAACATATGTA",3,2.39,NA,NA,NA,NA,NA,NA,"stop","T3S N13L Y35V Y91*",4
"lib2","SARS-CoV-2","CGCAAAAACGCAACAA",11,215.1,10.88,0.04,0.05,2.95,1.06,0,">1 nonsynonymous","L5W E154T",2
"lib2","SARS-CoV-2","CGCAAAAAGTTTGAGC",6,47.39,6,-4.84,1.23,1.5,1.16,0.01,">1 nonsynonymous","A81L Y121T",2
"lib2","SARS-CoV-2","CGCAAAACACCACCCC",2,23.55,10.22,-0.62,0.07,2.97,1,0,">1 nonsynonymous","C6F Y39A T201A",3
"lib2","SARS-CoV-2","CGCAAAACCCACGTCG",5,68.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5A Q84P Y119I",3
"lib2","SARS-CoV-2","CGCAAAACTAACCTAG",1,22.29,10.71,-0.13,0.06,3,1.01,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","CGCAAAATAATCCACA",3,61.65,9.78,-1.05,0.08,2.07,1.07,0,">1 nonsynonymous","D90V A105S",2
"lib2","SARS-CoV-2","CGCAAAATAGGAAGAA",5,34.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L D90R P96A Y121F",4
"lib2","SARS-CoV-2","CGCAAAATTGCAGTCT",1,13.89,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","Y159D T170R",2
"lib2","SARS-CoV-2","CGCAAACAAAACAACC",1,18.17,10.67,-0.16,0.04,3,1.01,0,">1 nonsynonymous","N40A N64D",2
"lib2","SARS-CoV-2","CGCAAACACAAATTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","CGCAAACCACCCACAA",1,22.04,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N30R N130V P161A R179S",4
"lib2","SARS-CoV-2","CGCAAACCTAACTACA",2,14.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F12R S41D R78S Q144Y L183F",5
"lib2","SARS-CoV-2","CGCAAACGGTTCCAAA",11,63.65,9.83,-1.01,0.39,1.5,1,0.07,">1 nonsynonymous","N4E Y93K V103D V115S R127S S184Y",6
"lib2","SARS-CoV-2","CGCAAAGAAGAATATG",3,0.52,NA,NA,NA,NA,NA,NA,"stop","Y50H N64* T100W N110T",4
"lib2","SARS-CoV-2","CGCAAAGAGCCGTGAC",2,46.1,10.17,-0.66,0.07,2.77,1.02,0,">1 nonsynonymous","N24R Y35S V52T",3
"lib2","SARS-CoV-2","CGCAAAGCGCGAGGCA",1,29.44,11,0.17,0.09,2.95,1.03,0,"1 nonsynonymous","N151F",1
"lib2","SARS-CoV-2","CGCAAAGCTCAAATTG",4,208.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N30S N64Q Y93G G155D",4
"lib2","SARS-CoV-2","CGCAAAGGAATAATGG",2,26.66,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G86D L95G E141L",3
"lib2","SARS-CoV-2","CGCAAAGTACCAATAA",4,58.45,10.87,0.04,0.06,2.91,1.11,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CGCAAAGTAGTTAACT",2,23.24,10.46,-0.38,0.06,2.89,1.12,0,">1 nonsynonymous","I138K F160Q",2
"lib2","SARS-CoV-2","CGCAAAGTTAACGAAA",3,83.9,10.73,-0.1,0.06,2.91,1.1,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","CGCAAATAAAACCCCA",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D Y93H",2
"lib2","SARS-CoV-2","CGCAAATAAGGACTCA",5,36.48,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Q84F C150K Q163T",3
"lib2","SARS-CoV-2","CGCAAATCATTACCCA",4,189.18,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N30S S43V P161Y V173L",4
"lib2","SARS-CoV-2","CGCAAATCCAAACTAC",2,27.32,9.83,-1.01,0.07,2.4,1.06,0,">1 nonsynonymous","G9H G51A T140I T148S",4
"lib2","SARS-CoV-2","CGCAAATCCATATTAG",1,53.69,10.54,-0.3,0.05,2.88,1.14,0,">1 nonsynonymous","V37D L111H",2
"lib2","SARS-CoV-2","CGCAAATCCCCACACG",9,82.75,9.77,-1.07,0.08,2.13,1.09,0,">1 nonsynonymous","N64P D90L E141V P191R",4
"lib2","SARS-CoV-2","CGCAAATGATATGAAC",5,14.67,8.66,-2.17,0.25,1.5,1.02,0.02,">1 nonsynonymous","F12S L60R",2
"lib2","SARS-CoV-2","CGCAAATGTTTGTCAA",4,13.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1M L131Q",2
"lib2","SARS-CoV-2","CGCAAATTAACTGGGT",3,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104Q E141S C150S T170V",4
"lib2","SARS-CoV-2","CGCAAATTCCAACTAA",6,1.64,NA,NA,NA,NA,NA,NA,"stop","N24I N120* N171F",3
"lib2","SARS-CoV-2","CGCAAATTTGAACTAA",4,23.94,6,-4.84,2,2,1.25,0.01,">1 nonsynonymous","P7K N120R S139W R179H",4
"lib2","SARS-CoV-2","CGCAAATTTGACAGTG",4,6.89,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","D59I K87L V103S S129C",4
"lib2","SARS-CoV-2","CGCAACAAACATTCTA",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72K E154L",2
"lib2","SARS-CoV-2","CGCAACATGACTGATA",1,14.02,8.3,-2.53,0.28,2.26,1.06,0.03,">1 nonsynonymous","L38N L125V F160P",3
"lib2","SARS-CoV-2","CGCAACCCAGGCGTTC",3,53.65,10.37,-0.46,0.06,2.88,1.01,0,">1 nonsynonymous","F8Y G146T N171T K198R",4
"lib2","SARS-CoV-2","CGCAACCCCGTCAACA",1,1.54,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGCAACCCTACAAGAA",3,20.82,9.68,-1.15,0.16,1.83,1.13,0.02,"1 nonsynonymous","R127M",1
"lib2","SARS-CoV-2","CGCAACGCATAACACC",1,57.17,9.05,-1.79,0.06,2.83,1.03,0,">1 nonsynonymous","T15S A22V G166V",3
"lib2","SARS-CoV-2","CGCAACGGTAATCAAA",4,16.63,6,-4.84,2,2.25,1.17,0.02,">1 nonsynonymous","V103W N120S S139M Y175E",4
"lib2","SARS-CoV-2","CGCAACGTAGAACCGA",3,69.76,10.65,-0.19,0.02,3,1,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CGCAACGTTCACGTAC",3,47.12,8.82,-2.02,0.09,2.78,1.15,0,">1 nonsynonymous","G9E N107P P169I",3
"lib2","SARS-CoV-2","CGCAACGTTGCCCCTC",7,145.99,9.72,-1.12,0.07,2.6,1.08,0,">1 nonsynonymous","D59G D98V G116S",3
"lib2","SARS-CoV-2","CGCAACTCATCAAGTT",3,27.89,6,-4.84,1.72,1.5,1.1,0.01,">1 nonsynonymous","N4Y A18K G146W C150Y P161L K199I",6
"lib2","SARS-CoV-2","CGCAACTTATATCGTG",1,28.26,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F8S S113F",2
"lib2","SARS-CoV-2","CGCAACTTTGAGGAAT",5,130.71,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y39L L57V N120R G172R",4
"lib2","SARS-CoV-2","CGCAACTTTTACTAAT",9,94.37,10.78,-0.06,0.04,2.94,1.08,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CGCAAGAATTATATTA",1,0.31,NA,NA,NA,NA,NA,NA,"stop","I72* Q176K",2
"lib2","SARS-CoV-2","CGCAAGACACAAATAA",5,35.86,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P96M A105E",2
"lib2","SARS-CoV-2","CGCAAGAGCATACAAT",8,63.2,9.81,-1.03,0.07,2.06,1.01,0,">1 nonsynonymous","E10M D90N R136H P149D",4
"lib2","SARS-CoV-2","CGCAAGATGAAACAAT",2,51.84,9.24,-1.6,0.1,2.35,1.02,0,">1 nonsynonymous","L111E Y121R",2
"lib2","SARS-CoV-2","CGCAAGATGTGCACAT",3,46.65,10.09,-0.74,0.05,2.96,1.01,0,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","CGCAAGGACCCGTGTA",5,71.54,8.8,-2.04,0.07,2.91,1.07,0,">1 nonsynonymous","E10S K114V N157S",3
"lib2","SARS-CoV-2","CGCAAGGCAAAGGCAA",3,9.76,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G51P L60R K128L",3
"lib2","SARS-CoV-2","CGCAAGTACAAGGAGT",4,36.95,9.77,-1.07,0.03,2.99,1.04,0,">1 nonsynonymous","K48S C61R Y123S G174L",4
"lib2","SARS-CoV-2","CGCAAGTACACCTCGC",4,23.91,10.71,-0.13,0.05,3,1.01,0,">1 nonsynonymous","Y39S D90K",2
"lib2","SARS-CoV-2","CGCAAGTACGACAAAC",5,16.12,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17Q A33N V103I R136T Q144K F185N",6
"lib2","SARS-CoV-2","CGCAAGTACTTTTTAT",9,46.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5I D112K I142T",3
"lib2","SARS-CoV-2","CGCAAGTATTACAAGC",2,80.11,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L5T D34R D98H N107D Q176W",5
"lib2","SARS-CoV-2","CGCAAGTGACTATTCT",6,111.26,10.73,-0.1,0.04,2.93,1.08,0,">1 nonsynonymous","I138N H189T",2
"lib2","SARS-CoV-2","CGCAAGTGGATCGTTT",5,129,10.88,0.04,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CGCAAGTTTAAGGAGT",16,225.98,10.7,-0.14,0.03,2.94,1.07,0,"1 nonsynonymous","V52Y",1
"lib2","SARS-CoV-2","CGCAATAAAATTCATT",10,106.86,10.79,-0.05,0.05,2.93,1.09,0,"1 nonsynonymous","T140L",1
"lib2","SARS-CoV-2","CGCAATAACCCATGTT",8,301.21,10.37,-0.47,0.03,2.89,1.07,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","CGCAATAAGAATTATG",8,68.46,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","K48C P96Y G116V S147N T170L G172E",6
"lib2","SARS-CoV-2","CGCAATAATATACCAT",13,12.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33M P54S D137Q",3
"lib2","SARS-CoV-2","CGCAATATCCAATGCT",11,111.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23F V37G T55I K87Y R127V E154A",6
"lib2","SARS-CoV-2","CGCAATATCTTGGAGT",6,148.66,10.82,-0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCAATCAATAATATA",5,103.34,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12R V77E Q176G",3
"lib2","SARS-CoV-2","CGCAATCACAGCACAA",10,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99D A105T",2
"lib2","SARS-CoV-2","CGCAATCACATATTCA",4,83.59,10.82,-0.02,0.06,2.94,1.06,0,">1 nonsynonymous","N64S Q84T K128T",3
"lib2","SARS-CoV-2","CGCAATCCATAAGAAA",1,110.86,10.43,-0.4,0.05,2.91,1.08,0,"1 nonsynonymous","G9C",1
"lib2","SARS-CoV-2","CGCAATCGAATTCGTG",2,11.58,7.02,-3.81,0.22,1.5,1.07,0.01,">1 nonsynonymous","S43P F62L D90G P96A A105Y S147P",6
"lib2","SARS-CoV-2","CGCAATCGATGCTCGC",1,30.61,8.04,-2.79,0.21,1.5,1.16,0.02,">1 nonsynonymous","P82R S147H",2
"lib2","SARS-CoV-2","CGCAATCTAAGAAGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53Y A81I T170V Y175V",4
"lib2","SARS-CoV-2","CGCAATGAATCTACAA",3,2.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","CGCAATGGAATCCAGA",11,24.19,8.57,-2.27,0.31,1.5,1,0.06,">1 nonsynonymous","N13L D90L N107A Y121C G146R K198P",6
"lib2","SARS-CoV-2","CGCAATGGATCAGCTA",3,26.98,8.46,-2.38,0.27,1.5,1.08,0.04,">1 nonsynonymous","Y91V V180T",2
"lib2","SARS-CoV-2","CGCAATGTAATCAAGC",3,65.73,9.03,-1.81,0.09,1.78,1.08,0,">1 nonsynonymous","F12S S36V",2
"lib2","SARS-CoV-2","CGCAATGTACTAGCAT",2,0.39,NA,NA,NA,NA,NA,NA,"stop","K114* Y121Q G166R",3
"lib2","SARS-CoV-2","CGCAATGTAGTTAAGT",2,0.41,NA,NA,NA,NA,NA,NA,"stop","N4K F62N F70A K94*",4
"lib2","SARS-CoV-2","CGCAATGTTAATAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A C102G E135Y",3
"lib2","SARS-CoV-2","CGCAATTACTAACATG",6,142.08,8.75,-2.08,0.07,2.14,1.15,0,">1 nonsynonymous","V52S I138M Q168G",3
"lib2","SARS-CoV-2","CGCAATTCACTTAACT",14,98.05,6.4,-4.44,0.32,1.5,1.12,0.01,">1 nonsynonymous","A81F P133H P149I",3
"lib2","SARS-CoV-2","CGCAATTCATGATGAC",2,29.09,10.89,0.06,0.08,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCAATTGAAGGATCA",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A14T S45V N58M G86L L125I R136V G146S T201V",9
"lib2","SARS-CoV-2","CGCAATTTTAACGGTA",6,0.63,NA,NA,NA,NA,NA,NA,"stop","V180*",1
"lib2","SARS-CoV-2","CGCAATTTTCTAACAA",13,160.54,10.17,-0.67,0.03,2.96,1.04,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","CGCAATTTTCTCACAA",8,71.51,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y35E Y50C K56P D90I",4
"lib2","SARS-CoV-2","CGCACAAACATAATAT",11,113.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37D V77R L125H G172I",4
"lib2","SARS-CoV-2","CGCACAACAACCCAAT",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105L R124S Q163E",3
"lib2","SARS-CoV-2","CGCACAAGGCGGCAAT",7,29.26,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F17Q D68K D90F L131D E141T",5
"lib2","SARS-CoV-2","CGCACAATGTCTCCTC",1,18.22,9.93,-0.91,0.19,2.67,1.01,0.02,">1 nonsynonymous","G117S K128D",2
"lib2","SARS-CoV-2","CGCACACACCAGAGTC",3,108.39,10.36,-0.47,0.06,2.82,1.03,0,">1 nonsynonymous","N13R F47V",2
"lib2","SARS-CoV-2","CGCACACCACCAATTG",11,1.43,NA,NA,NA,NA,NA,NA,"stop","R16C P54L G83* F99Y",4
"lib2","SARS-CoV-2","CGCACACCTAACATCT",10,408.21,10.82,-0.02,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACACGATGGGGAA",7,117.02,8.9,-1.94,0.07,2.95,1.05,0,">1 nonsynonymous","G9P T15S I104L N118Q I142L G166N",6
"lib2","SARS-CoV-2","CGCACACTGACGTCAA",13,82.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C31Q F70W H189Y",3
"lib2","SARS-CoV-2","CGCACACTTCTGATAC",2,26.43,10.64,-0.19,0.04,2.97,1.04,0,"1 nonsynonymous","N151C",1
"lib2","SARS-CoV-2","CGCACAGAGATTTTAC",1,52.19,10.23,-0.61,0.05,2.81,1.07,0,">1 nonsynonymous","I2P T15I",2
"lib2","SARS-CoV-2","CGCACAGGACATCAAT",1,7.9,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","N40W Q84P F99C Y119E I142S",5
"lib2","SARS-CoV-2","CGCACATATACCAGTG",5,29.18,9.98,-0.85,0.08,2.7,1.06,0,">1 nonsynonymous","T55Y K114L Q144P",3
"lib2","SARS-CoV-2","CGCACATTACACCTAC",6,94.27,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y91A N157L G166M",3
"lib2","SARS-CoV-2","CGCACATTATCCATCA",12,225.81,10.48,-0.35,0.03,2.88,1.03,0,"1 nonsynonymous","T15I",1
"lib2","SARS-CoV-2","CGCACCAAAAGCATAG",1,26,10.81,-0.03,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACCAATATACCGC",11,112.17,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G9L G86Q D98T T140L V153P",5
"lib2","SARS-CoV-2","CGCACCCAACACCTTG",12,119.8,10.66,-0.18,0.05,2.94,1.07,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","CGCACCCGTCTCATTT",2,10.29,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N24S S69P T85F",3
"lib2","SARS-CoV-2","CGCACCCTTCACGGGC",4,78.34,9.24,-1.59,0.08,2.91,1.14,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","CGCACCGAGACACCTC",1,33.91,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C6I Y50L D59L C150A Q163M",5
"lib2","SARS-CoV-2","CGCACCTAAGAGACGT",9,73.46,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T3S G86N A105G R136T Q144P",5
"lib2","SARS-CoV-2","CGCACCTAAGGAGGCC",1,13.82,10.76,-0.08,0.07,2.72,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACCTGACAAAGAT",2,111.94,10.38,-0.46,0.02,2.93,1.04,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","CGCACCTGGAACACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F K56E P82F K87L E135S",5
"lib2","SARS-CoV-2","CGCACGAAAAAAATTT",3,28.42,9.43,-1.4,0.16,2.01,1.11,0.01,">1 nonsynonymous","F8L I88C K199F",3
"lib2","SARS-CoV-2","CGCACGAACTTGTACC",2,29.91,9.89,-0.95,0.11,2.2,1.11,0.01,">1 nonsynonymous","N13L K48L C61S",3
"lib2","SARS-CoV-2","CGCACGACGAACCCAT",2,27.16,10.9,0.07,0.07,2.98,1.05,0,">1 nonsynonymous","K128S Q163K",2
"lib2","SARS-CoV-2","CGCACGAGAATTAATC",2,25.84,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I80P Q144E G152V",3
"lib2","SARS-CoV-2","CGCACGATTAAGATCT",6,26.65,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A33L L38V G51T Y143R",4
"lib2","SARS-CoV-2","CGCACGCCTGATCACT",1,79.98,10.37,-0.47,0.05,2.89,1.12,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","CGCACGGATAATTAAT",1,11.11,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C102S I142S",2
"lib2","SARS-CoV-2","CGCACGGGTACACCGC",10,86.33,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E76R P82S K87M K114L",4
"lib2","SARS-CoV-2","CGCACGGTCTCATTTT",7,142.63,10.66,-0.18,0.02,2.95,1.05,0,">1 nonsynonymous","L122Y E135M",2
"lib2","SARS-CoV-2","CGCACTAATCAGATAT",7,43.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16W A105L T140A N151V",4
"lib2","SARS-CoV-2","CGCACTAATGTACATA",2,18.45,10.97,0.14,0.06,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACTCAATTTGCAC",2,105.07,10.71,-0.12,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACTCAGATAAATA",1,31.59,10.86,0.02,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACTCATAAAATGA",2,16.92,10.57,-0.27,0.04,2.93,1.09,0,">1 nonsynonymous","A33S F62C K114M",3
"lib2","SARS-CoV-2","CGCACTCCAACAGAAC",3,27.91,10.7,-0.13,0.08,2.99,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCACTCTAACTTATG",3,29.1,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41C C61R A89R K128G",4
"lib2","SARS-CoV-2","CGCACTGGCGTAGAAA",4,70.47,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A33Q K114E C150G F160I K198R",5
"lib2","SARS-CoV-2","CGCACTGGGAGTTCAA",1,31.9,9.7,-1.13,0.09,2.08,1.04,0,">1 nonsynonymous","T15D Y35D T63D S129F",4
"lib2","SARS-CoV-2","CGCACTGTAGATGTTT",1,12.85,9.77,-1.06,0.15,2.71,1.01,0.01,">1 nonsynonymous","L5H E10D R136A T201K",4
"lib2","SARS-CoV-2","CGCACTGTTTCGTCAC",3,41.43,10.74,-0.09,0.11,2.77,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGCACTTACCAAAGCA",17,119.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Q T100Q",2
"lib2","SARS-CoV-2","CGCACTTCCATATATA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y L57D G101K Q144P L188Q",5
"lib2","SARS-CoV-2","CGCACTTCTTCCCTAT",3,76.75,9.76,-1.08,0.06,2.19,1.03,0,">1 nonsynonymous","V77L A81E T85F K132G K198S",5
"lib2","SARS-CoV-2","CGCACTTGAGGCGATA",12,117.8,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I28M T55R D68T D112Y Y121T N130D Y165K",7
"lib2","SARS-CoV-2","CGCACTTGCGTAGTAG",4,7.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6L W106R G117S P191V",4
"lib2","SARS-CoV-2","CGCACTTTCATCGTGA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","L60D S108* P133R Y143F G155Q",5
"lib2","SARS-CoV-2","CGCACTTTCGAGTATA",3,11.53,9.57,-1.27,0.12,2.22,1.08,0.01,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","CGCACTTTGAAACCTT",2,8.98,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","A22V Y35P S139I F167Q",4
"lib2","SARS-CoV-2","CGCAGAAAATAATAGA",10,249.74,9.49,-1.34,0.04,2.89,1.1,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","CGCAGAAATGAAAACC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","F12R A33E S41V Y159*",4
"lib2","SARS-CoV-2","CGCAGAAATTGTGAGA",7,14.53,6.31,-4.53,0.71,1.5,1.09,0.04,">1 nonsynonymous","L95R A105Y L131M",3
"lib2","SARS-CoV-2","CGCAGAAGCAAATTAA",3,27.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68W",1
"lib2","SARS-CoV-2","CGCAGAAGTTCGAACC",4,24.57,10.5,-0.33,0.08,2.86,1.13,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","CGCAGAATATATCAAC",2,68.15,8.37,-2.47,0.09,1.9,1.01,0,">1 nonsynonymous","R73G Y165W",2
"lib2","SARS-CoV-2","CGCAGAATCAAATAGT",2,5.33,6,-4.84,2,3,1,0,">1 nonsynonymous","A42S P54T W106G G116T T201C",5
"lib2","SARS-CoV-2","CGCAGACAGAAAAGCA",8,3.77,NA,NA,NA,NA,NA,NA,"stop","N30K Y165*",2
"lib2","SARS-CoV-2","CGCAGACATTGTACAG",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M G86R D98Y K199Y",4
"lib2","SARS-CoV-2","CGCAGACGACCGCTAC",4,74,9.08,-1.76,0.03,2.95,1.06,0,">1 nonsynonymous","T63Q T170L",2
"lib2","SARS-CoV-2","CGCAGACGTGAAACCT",9,171.43,10.66,-0.18,0.03,2.91,1.08,0,"1 nonsynonymous","T140G",1
"lib2","SARS-CoV-2","CGCAGACGTTTTTTTA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","P7* C150V Q176L",3
"lib2","SARS-CoV-2","CGCAGAGGACGAAATG",4,106.09,10.18,-0.66,0.04,2.98,1.04,0,">1 nonsynonymous","N58T L125A",2
"lib2","SARS-CoV-2","CGCAGATATCATTGAA",6,121.39,10.8,-0.03,0.04,2.95,1.07,0,">1 nonsynonymous","S36E T46S",2
"lib2","SARS-CoV-2","CGCAGATGCGAAAACG",9,2.14,NA,NA,NA,NA,NA,NA,"stop","I2F G83D L131*",3
"lib2","SARS-CoV-2","CGCAGCAAAGTCGTGA",4,5.57,6.57,-4.27,2,3,1.13,0.01,">1 nonsynonymous","V11E G101Q Y123I E141S",4
"lib2","SARS-CoV-2","CGCAGCAACGAAACAC",3,50.63,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C31V A89P D112M K199S",4
"lib2","SARS-CoV-2","CGCAGCAAGCGTATTC",2,78.46,10.86,0.02,0.03,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCAGCAGGGCAAGGG",2,15.31,7.44,-3.39,0.23,1.5,1.08,0.02,">1 nonsynonymous","R27L N107I K114V",3
"lib2","SARS-CoV-2","CGCAGCCCAAAAGATA",1,71.24,8.56,-2.28,0.14,1.69,1.19,0.01,">1 nonsynonymous","C6N S29L V37R R136M L188E",5
"lib2","SARS-CoV-2","CGCAGCCTAACAAACT",8,61.03,6.14,-4.7,1.06,1.5,1.23,0.03,">1 nonsynonymous","A33V Y39L F44V E76S N107S N120M",6
"lib2","SARS-CoV-2","CGCAGCTCATAAAGGT",1,0.66,NA,NA,NA,NA,NA,NA,"stop","G51P T100*",2
"lib2","SARS-CoV-2","CGCAGGAAGTCTTACG",6,42.01,10.79,-0.05,0.05,3,1.03,0,"1 nonsynonymous","T140Q",1
"lib2","SARS-CoV-2","CGCAGGATATATATAA",11,198.54,10.13,-0.71,0.02,2.86,1.07,0,">1 nonsynonymous","Y91M P149G",2
"lib2","SARS-CoV-2","CGCAGGCGATAAGAGC",5,72.25,7.9,-2.93,0.15,1.58,1.05,0.01,">1 nonsynonymous","D34Q D98V K132R T170N",4
"lib2","SARS-CoV-2","CGCAGGGGCCACTCTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R Y143S L188P K199Y",4
"lib2","SARS-CoV-2","CGCAGGGGCCCAACTT",5,44.45,9.27,-1.56,0.09,2.47,1.03,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","CGCAGGGTATCGAATA",4,151.79,10.15,-0.69,0.03,2.91,1.03,0,">1 nonsynonymous","T63P G116S",2
"lib2","SARS-CoV-2","CGCAGTACTAAAAGAT",1,5.51,9.74,-1.1,0.25,1.97,1.03,0.01,">1 nonsynonymous","A18T G116Q S139C",3
"lib2","SARS-CoV-2","CGCAGTATAAGCAGTT",5,109.38,6,-4.84,1.35,1.5,1.13,0.01,"1 nonsynonymous","P177E",1
"lib2","SARS-CoV-2","CGCAGTATATCATAAA",9,102.24,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G117V C150V",2
"lib2","SARS-CoV-2","CGCAGTCATCTAAACG",5,168.08,10.81,-0.03,0.04,2.91,1.06,0,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","CGCAGTCCGAACTACA",1,8.63,10.33,-0.5,0.1,2.74,1.1,0.01,">1 nonsynonymous","S41F D90H",2
"lib2","SARS-CoV-2","CGCAGTGCTACGGACA",13,290.61,10.71,-0.13,0.04,2.89,1.11,0,">1 nonsynonymous","I2D T140D",2
"lib2","SARS-CoV-2","CGCAGTTTTGCGAACA",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98S K128V G166S",3
"lib2","SARS-CoV-2","CGCATAAAACCGCAGG",3,30.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S36W G146C V181G",3
"lib2","SARS-CoV-2","CGCATAAAATATGGCG",1,122.89,10.04,-0.8,0.08,2.46,1.09,0,">1 nonsynonymous","T15Y N64D N151R",3
"lib2","SARS-CoV-2","CGCATAAACACCGCCT",18,170.99,6,-4.84,1.48,1.5,1.17,0.01,">1 nonsynonymous","I2N S19T G83I N120F",4
"lib2","SARS-CoV-2","CGCATAAACATCCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","CGCATAAATAATGAGA",2,13.05,10.12,-0.72,0.14,2.28,1,0.01,">1 nonsynonymous","A89H T148D",2
"lib2","SARS-CoV-2","CGCATAACAACATCTA",2,99.91,10.55,-0.29,0.03,2.87,1.09,0,">1 nonsynonymous","T15P K128V",2
"lib2","SARS-CoV-2","CGCATAACACAAAATA",1,9.73,6,-4.84,2,3,1.46,0.03,">1 nonsynonymous","V20W P82L G116R E135R G152R",5
"lib2","SARS-CoV-2","CGCATAACTAAGCATG",8,169.94,10.87,0.03,0.03,2.94,1.05,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","CGCATAAGAACTAAAA",7,43.21,6.6,-4.24,0.7,1.5,1.21,0.07,">1 nonsynonymous","A89R T170R",2
"lib2","SARS-CoV-2","CGCATAAGAATCAAAT",13,215.25,7.5,-3.33,0.11,1.55,1.11,0,">1 nonsynonymous","A145I C150Q",2
"lib2","SARS-CoV-2","CGCATAAGTAGACGGG",3,38.58,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","E10L R73S G83L Y119K N157I",5
"lib2","SARS-CoV-2","CGCATAATGTCATCGG",6,106.46,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6I R27E L131W",3
"lib2","SARS-CoV-2","CGCATACACGAACTAA",8,46.96,6.08,-4.75,1.18,1.5,1.23,0.03,">1 nonsynonymous","L60R D137F",2
"lib2","SARS-CoV-2","CGCATACATGTTATCA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","P96R P149* G155T",3
"lib2","SARS-CoV-2","CGCATACCAACGTTGG",3,31.8,10.38,-0.46,0.06,2.99,1.01,0,">1 nonsynonymous","S41Y K87W T100F",3
"lib2","SARS-CoV-2","CGCATACTCAGTTAAT",3,22.29,10.66,-0.18,0.07,3,1,0,"1 nonsynonymous","A33F",1
"lib2","SARS-CoV-2","CGCATACTTCAGTGTT",10,120.34,6.12,-4.72,0.74,1.5,1.16,0.01,">1 nonsynonymous","A105N P149R L162W",3
"lib2","SARS-CoV-2","CGCATATAAAGATGAC",4,31.46,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I28L F70R L95F S113H Y119G",5
"lib2","SARS-CoV-2","CGCATATAAGACACAC",1,25.72,7.82,-3.02,0.29,1.5,1.1,0.03,">1 nonsynonymous","V11A V37Y I72L Y165H",4
"lib2","SARS-CoV-2","CGCATATAAGCTTCAT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","C61K A89Q A105S L122V P149R C158D G174*",7
"lib2","SARS-CoV-2","CGCATATAGTCATAGG",3,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R Y119L",2
"lib2","SARS-CoV-2","CGCATATCGCAATATG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","C6* F70V",2
"lib2","SARS-CoV-2","CGCATATCTATTTACT",6,31.95,6.11,-4.73,1.22,1.5,1.13,0.04,">1 nonsynonymous","G9F T15R G146V Y175M",4
"lib2","SARS-CoV-2","CGCATATGCACACCAA",3,17.5,7.89,-2.95,0.13,2.51,1.03,0.01,">1 nonsynonymous","R27V G172S",2
"lib2","SARS-CoV-2","CGCATATGGGTTCAGC",2,47.45,10.82,-0.01,0.06,2.9,1.11,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","CGCATATGTATCACTT",5,53.44,10.94,0.1,0.05,2.89,1.11,0,">1 nonsynonymous","L95M L122K",2
"lib2","SARS-CoV-2","CGCATCAAAAAATTAG",10,96.03,10.8,-0.04,0.03,2.98,1.03,0,">1 nonsynonymous","T3S D98E",2
"lib2","SARS-CoV-2","CGCATCAACCTATATG",1,29.66,9.06,-1.78,0.11,2.71,1.14,0,">1 nonsynonymous","E141P T148P",2
"lib2","SARS-CoV-2","CGCATCACAGACCATT",4,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L S41F F70S E141F L183F",5
"lib2","SARS-CoV-2","CGCATCACGAAAAGAC",9,69.84,8.23,-2.61,0.14,1.84,1.09,0.01,">1 nonsynonymous","A33L Y66I K87M K94Y G174A",5
"lib2","SARS-CoV-2","CGCATCATAAAAATTA",12,19.24,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C6S T15D D112F",3
"lib2","SARS-CoV-2","CGCATCATAGATCACT",7,113.83,10.49,-0.35,0.06,2.84,1.04,0,">1 nonsynonymous","A18T L60H",2
"lib2","SARS-CoV-2","CGCATCATCTAAAGAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7F R78L F99A S113* R136D",5
"lib2","SARS-CoV-2","CGCATCATTTTCTGAA",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27Q A42W W106D L122P L162W P169A T170K V181G",8
"lib2","SARS-CoV-2","CGCATCCAATTTGACG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","G9N K26R T46* L60A D98N V103N",6
"lib2","SARS-CoV-2","CGCATCCACGGACTTT",3,16.99,6,-4.84,1.57,1.5,1.06,0.02,">1 nonsynonymous","S19G I88P",2
"lib2","SARS-CoV-2","CGCATCCATGAATTAA",6,116.61,10.75,-0.08,0.04,2.88,1.09,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","CGCATCCATTTGCACA",2,14.92,9.15,-1.68,0.28,1.5,1.3,0.04,">1 nonsynonymous","S29L G83V",2
"lib2","SARS-CoV-2","CGCATCCCAGGCAACT",7,47.1,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6P F44N F99S N151H",4
"lib2","SARS-CoV-2","CGCATCCTGGCAGGCC",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C R179S",2
"lib2","SARS-CoV-2","CGCATCCTTACTAGTC",1,12.6,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","V52D R127V P161L",3
"lib2","SARS-CoV-2","CGCATCTGCAAGATAT",1,30.37,9.92,-0.92,0.1,2.32,1,0.01,">1 nonsynonymous","K26A Y66D S147L",3
"lib2","SARS-CoV-2","CGCATGATTTGGTGAC",3,57.97,9.28,-1.55,0.07,2.44,1.15,0,">1 nonsynonymous","A42S D90S S129R T140F T148L G174D S200T",7
"lib2","SARS-CoV-2","CGCATGCACCGTTGAC",1,39.88,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","V32G G83V Q176V",3
"lib2","SARS-CoV-2","CGCATGCCTCGCACAC",3,21.59,9.14,-1.7,0.17,1.65,1.06,0.02,">1 nonsynonymous","S53L N64I A105C",3
"lib2","SARS-CoV-2","CGCATGCGTAAATCAT",2,13.47,10.51,-0.32,0.06,2.96,1.06,0,"1 nonsynonymous","V115M",1
"lib2","SARS-CoV-2","CGCATGGCTTCAAATC",11,89.31,6.85,-3.98,0.23,1.5,1.15,0.01,">1 nonsynonymous","N40L L60P T100Y Y119F L131I",5
"lib2","SARS-CoV-2","CGCATGTATAACTATA",2,35.43,10.8,-0.04,0.1,2.76,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCATGTTTGACTATA",1,6.39,9.33,-1.51,0.23,2.37,1,0.02,">1 nonsynonymous","N4V G9Y N107R",3
"lib2","SARS-CoV-2","CGCATTAAAAGCGTTG",4,70.09,9.71,-1.12,0.11,2.34,1.04,0,">1 nonsynonymous","E10Y T46F T148M V153N T201S",5
"lib2","SARS-CoV-2","CGCATTAAAGTCCAGG",9,110.91,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N1V G86L Q144R",3
"lib2","SARS-CoV-2","CGCATTAAATAGTTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L E141F",2
"lib2","SARS-CoV-2","CGCATTAATCAGCCCA",1,33.08,6,-4.84,2,1.5,1.28,0.03,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","CGCATTACTCATCACT",7,129.46,9.93,-0.91,0.05,2,1.02,0,">1 nonsynonymous","D98S W106Q",2
"lib2","SARS-CoV-2","CGCATTATTAATAATG",6,24.82,6.84,-4,0.33,1.5,1.06,0.02,">1 nonsynonymous","C6S T63F V103L Y119S K128P V153P E186N",7
"lib2","SARS-CoV-2","CGCATTCAGGTGCAAC",7,0.91,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib2","SARS-CoV-2","CGCATTGATAAAGGGC",4,13.14,8.69,-2.15,0.19,2.85,1.08,0.01,">1 nonsynonymous","N1K N58R G117S G174S",4
"lib2","SARS-CoV-2","CGCATTGTAGCAACAA",3,27.98,7.58,-3.26,0.2,1.5,1.13,0.01,">1 nonsynonymous","L5M F62C R136A G152F",4
"lib2","SARS-CoV-2","CGCATTTATGGCAACT",2,37.65,10.84,0,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCATTTCAACAACCG",8,90.27,10.76,-0.08,0.03,2.93,1.08,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","CGCATTTCACCCAGAA",3,149.94,10.45,-0.38,0.05,2.94,1.04,0,">1 nonsynonymous","T63M K87I",2
"lib2","SARS-CoV-2","CGCATTTTAGGATCTA",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84M Y119I E141S G152F",4
"lib2","SARS-CoV-2","CGCATTTTTTCTGATC",1,36.8,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T100P I104V L122C",3
"lib2","SARS-CoV-2","CGCCAAAATGTATCCA",2,140.91,9.55,-1.29,0.04,2.78,1.09,0,">1 nonsynonymous","Y35I G74S",2
"lib2","SARS-CoV-2","CGCCAAACAAAAAATA",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F S53R L57T G146C G155H",5
"lib2","SARS-CoV-2","CGCCAAACAAGCCTAA",7,47.03,6.6,-4.24,0.38,1.73,1.25,0.03,">1 nonsynonymous","V71A N107Y R136W N151P",4
"lib2","SARS-CoV-2","CGCCAAACAATACGGG",11,171.2,10.31,-0.53,0.04,2.7,1.06,0,">1 nonsynonymous","N4E A89S N151T Q163C",4
"lib2","SARS-CoV-2","CGCCAAAGAACACCAG",3,25.56,9.93,-0.91,0.1,2.58,1.02,0,">1 nonsynonymous","A14E Y178C",2
"lib2","SARS-CoV-2","CGCCAAAGCGATTGTA",6,38.88,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N64C L95P K132P",3
"lib2","SARS-CoV-2","CGCCAAATAAATTTAC",1,27.27,9.15,-1.69,0.15,2.49,1.14,0.01,">1 nonsynonymous","N107M T201N",2
"lib2","SARS-CoV-2","CGCCAAATATCATTTC",4,200.38,7.85,-2.99,0.17,1.5,1.05,0.01,">1 nonsynonymous","G117L Y165V",2
"lib2","SARS-CoV-2","CGCCAAATGGATTACA",5,73.43,10.75,-0.09,0.05,2.93,1.06,0,"1 nonsynonymous","R27F",1
"lib2","SARS-CoV-2","CGCCAACAACCATCAT",1,27.34,8.17,-2.66,0.15,2.19,1,0.01,">1 nonsynonymous","R136C Y175M",2
"lib2","SARS-CoV-2","CGCCAACAGACCCGAT",3,42.03,6.9,-3.93,0.49,1.5,1.14,0.03,">1 nonsynonymous","K114D Y121L Y159V",3
"lib2","SARS-CoV-2","CGCCAACCAAATATAC",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L T100L F134K",3
"lib2","SARS-CoV-2","CGCCAACCGTGTCCGT",1,27.55,9.51,-1.33,0.19,1.98,1.19,0.01,">1 nonsynonymous","G83C P96S S139R",3
"lib2","SARS-CoV-2","CGCCAACTAAACACAC",4,62.9,8.91,-1.93,0.09,2.93,1.1,0,">1 nonsynonymous","Y91W F126I T201I",3
"lib2","SARS-CoV-2","CGCCAACTAACCTGTG",3,6.24,NA,NA,NA,NA,NA,NA,"stop","T63* A81V N118D Y159G",4
"lib2","SARS-CoV-2","CGCCAACTCCACATAC",3,3.86,NA,NA,NA,NA,NA,NA,"stop","N4L C102* W106S",3
"lib2","SARS-CoV-2","CGCCAAGACTCAAGAC",14,69.24,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R16D C49R D97N P149Q",4
"lib2","SARS-CoV-2","CGCCAAGATTGAATTA",13,23.51,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19E N109I K132W P149A V181R S200I",6
"lib2","SARS-CoV-2","CGCCAAGTGGCGACTA",3,10.05,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F8G F17W D98F G116T G152F F160Y",6
"lib2","SARS-CoV-2","CGCCAATAATGACCGG",4,20.38,10.2,-0.64,0.09,2.93,1,0,"1 nonsynonymous","Y91W",1
"lib2","SARS-CoV-2","CGCCAATACCGAGTGA",2,2.62,NA,NA,NA,NA,NA,NA,"stop","Y39* F99Y",2
"lib2","SARS-CoV-2","CGCCAATGGACTTCTG",7,14.75,6.41,-4.42,0.95,1.5,1.15,0.06,">1 nonsynonymous","N1S S19L N109I",3
"lib2","SARS-CoV-2","CGCCAATGGCTCCGAC",4,76.1,10.91,0.07,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCACAAGCATTTCT",6,15.68,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T55L V103D S129E I142T P149H T170M",6
"lib2","SARS-CoV-2","CGCCACACGAACTAAT",5,38.11,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","N4S A14R G51V V65M K128I C158S P177V",7
"lib2","SARS-CoV-2","CGCCACACGATATCTG",2,0.38,NA,NA,NA,NA,NA,NA,"stop","S41R S139*",2
"lib2","SARS-CoV-2","CGCCACAGATGAAGGA",6,0.63,NA,NA,NA,NA,NA,NA,"stop","F134* G196R",2
"lib2","SARS-CoV-2","CGCCACGGGTTACTTT",6,30.07,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6S V37L N64Q P82Q I88W",5
"lib2","SARS-CoV-2","CGCCACGTCCGCACGG",4,1.71,NA,NA,NA,NA,NA,NA,"stop","N13M K114* N120V S129T D137L Y175S V182F",7
"lib2","SARS-CoV-2","CGCCACTGGGCTTAGC",1,56.28,10.25,-0.59,0.05,2.92,1.02,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","CGCCACTTATGACTCA",2,35.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T46R G86K T148R",3
"lib2","SARS-CoV-2","CGCCAGAATACCCTAG",15,166.74,6.19,-4.65,0.43,1.5,1.14,0.01,">1 nonsynonymous","A22R Q79H Y143T P197A",4
"lib2","SARS-CoV-2","CGCCAGATATACTTCA",5,91.72,8.58,-2.26,0.08,2.99,1,0,"1 nonsynonymous","S113H",1
"lib2","SARS-CoV-2","CGCCAGATATGAATCC",5,62.78,10.01,-0.82,0.07,2.56,1,0,">1 nonsynonymous","K56E F99H",2
"lib2","SARS-CoV-2","CGCCAGTAAAGATAAC",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I L57T Y123W V180T",4
"lib2","SARS-CoV-2","CGCCAGTACAGTTCAA",6,103.39,10.57,-0.27,0.03,2.93,1.07,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","CGCCAGTGAATACTAT",8,182.28,10.91,0.07,0.04,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CGCCAGTGTTTTGCTT",1,28.24,7.43,-3.41,0.29,1.5,1.08,0.04,">1 nonsynonymous","A89D K132R T201M",3
"lib2","SARS-CoV-2","CGCCAGTTACACTTCA",5,17.94,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56E L183P",2
"lib2","SARS-CoV-2","CGCCAGTTATATAATC",4,19.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V20S P54R G86L N92P T100A W106S Y121H S139I Y165T L183R",10
"lib2","SARS-CoV-2","CGCCATAAATCACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N24M Y35* G116V",3
"lib2","SARS-CoV-2","CGCCATAACTCGAAAA",7,31.29,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V11E G101Q Y123I E141S",4
"lib2","SARS-CoV-2","CGCCATACAAAAAAGC",2,9.18,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A33T S41D E141F G172R",4
"lib2","SARS-CoV-2","CGCCATACCCTAAAAA",1,38.97,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F70R I88N P133W",3
"lib2","SARS-CoV-2","CGCCATAGACTTATAC",1,32.24,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","CGCCATAGAGTAAAAA",1,44.85,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","N4I D97I N107L P177G",4
"lib2","SARS-CoV-2","CGCCATAGCAAATTTT",2,70.24,10.83,-0.01,0.05,2.95,1.08,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","CGCCATATGTGAGACC",2,76.29,10.81,-0.02,0.09,2.81,1.18,0,">1 nonsynonymous","N64K L122K",2
"lib2","SARS-CoV-2","CGCCATCAAATTCTAG",3,29.69,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S43M T63F T85N D97Y S113K Y175C",6
"lib2","SARS-CoV-2","CGCCATCAATACGGAG",7,313.17,6,-4.84,0.76,1.5,1.15,0,">1 nonsynonymous","V37K F160H P177V",3
"lib2","SARS-CoV-2","CGCCATCAGTTTTGAC",3,16.7,8.33,-2.51,0.14,1.7,1.05,0.01,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","CGCCATCCCACCACAC",7,245.05,10.67,-0.17,0.04,2.91,1.08,0,">1 nonsynonymous","G51R D90S",2
"lib2","SARS-CoV-2","CGCCATCGCCCTTTAC",4,34.8,6,-4.84,2,3,1.11,0,">1 nonsynonymous","Y35T T55E Y123V Y143F Y159A",5
"lib2","SARS-CoV-2","CGCCATCTGCAGATAC",4,49.8,10.08,-0.76,0.09,2.57,1.03,0,">1 nonsynonymous","R136C A190W",2
"lib2","SARS-CoV-2","CGCCATGGGACCATTT",9,201.16,10.83,0,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCATGTGGAAACTT",4,51.7,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F17V I72T N107T",3
"lib2","SARS-CoV-2","CGCCATTAACATGACT",17,219.2,10.85,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCATTAGACCTCTC",6,140.85,10.81,-0.02,0.08,2.78,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCATTGCGTATACA",6,107.75,9.65,-1.18,0.09,1.85,1.08,0,">1 nonsynonymous","D34A K128M E141V",3
"lib2","SARS-CoV-2","CGCCATTGTTTCTAAG",2,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16A G51T",2
"lib2","SARS-CoV-2","CGCCATTTCTAAGAGA",5,64.64,8.22,-2.62,0.1,1.83,1.09,0,">1 nonsynonymous","A22V S36V R78C F160L",4
"lib2","SARS-CoV-2","CGCCCAACATCTTCCA",14,115.47,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","CGCCCAATAAAGCCTC",2,43.67,10.79,-0.04,0.06,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCCAATAGGTGATG",3,88.18,10.73,-0.11,0.03,2.96,1.05,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CGCCCACAAGCACACA",2,19.12,6.68,-4.16,0.44,1.5,1.12,0.02,">1 nonsynonymous","C150A G155D K199D",3
"lib2","SARS-CoV-2","CGCCCACATGAGAGCC",4,70.79,8.66,-2.18,0.07,2.23,1.1,0,">1 nonsynonymous","P7K E135S N171G",3
"lib2","SARS-CoV-2","CGCCCACCCTCCTGTC",1,11.22,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","S45C C61L Y93F N120M N151V",5
"lib2","SARS-CoV-2","CGCCCACGAACACCCT",2,36,10.28,-0.56,0.07,2.77,1.03,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","CGCCCACTGGAGAGGG",7,78.53,10.94,0.1,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCCAGCTAAATGCC",14,186.5,10.8,-0.04,0.04,2.93,1.05,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","CGCCCAGCTCTGCTTA",8,89.73,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S36V S69L S139Y",3
"lib2","SARS-CoV-2","CGCCCAGCTTAGACAC",5,19.87,6.67,-4.16,0.44,1.5,1.17,0.02,">1 nonsynonymous","A89R N109Q",2
"lib2","SARS-CoV-2","CGCCCAGGCACGGGAG",6,14.54,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","A22W A42T N92G G101S A105P",5
"lib2","SARS-CoV-2","CGCCCAGGGTCATGAT",4,7.38,7.84,-3,0.57,1.5,1,0.07,">1 nonsynonymous","L5N N40L C61V L95E T140L",5
"lib2","SARS-CoV-2","CGCCCAGGTTCCAGCA",7,146.18,9.94,-0.89,0.06,2.66,1.02,0,">1 nonsynonymous","A14L P149T",2
"lib2","SARS-CoV-2","CGCCCATAACGAACTT",4,6.07,9.38,-1.46,0.11,2.11,1,0,">1 nonsynonymous","F8G V37K C61M N151D",4
"lib2","SARS-CoV-2","CGCCCATACAGCATAA",3,36.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82D L131H T170R",3
"lib2","SARS-CoV-2","CGCCCATACGCAATGA",4,67.4,8.76,-2.07,0.15,1.5,1.02,0.01,">1 nonsynonymous","F62S W106K K128S T140M",4
"lib2","SARS-CoV-2","CGCCCATAGGTTCAGT",4,29.63,8.87,-1.96,0.1,2.88,1.05,0.01,"1 nonsynonymous","Y143Q",1
"lib2","SARS-CoV-2","CGCCCATCACACGGTG",4,34.24,6.48,-4.35,0.58,1.5,1.13,0.04,">1 nonsynonymous","T3M T85V R127H Y178N",4
"lib2","SARS-CoV-2","CGCCCATCAGCGACCG",1,20.64,9.02,-1.82,0.19,1.57,1.03,0.01,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","CGCCCATTAACCAACA",1,1.19,NA,NA,NA,NA,NA,NA,"stop","L5* S43T V115Y P177S",4
"lib2","SARS-CoV-2","CGCCCATTATTCTCCA",3,16.64,6,-4.84,0.77,3,1.09,0,">1 nonsynonymous","F8L S36R A105P",3
"lib2","SARS-CoV-2","CGCCCATTCCGACCGA",11,73.48,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P82Y G86V P133F",3
"lib2","SARS-CoV-2","CGCCCATTTGGTTGTA",2,11.28,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G86R D98C Y119S",3
"lib2","SARS-CoV-2","CGCCCCAAAGATTCTA",1,20.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S45F K48Y C61L T100K N120L",5
"lib2","SARS-CoV-2","CGCCCCAGCTGTAAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93M F160A",2
"lib2","SARS-CoV-2","CGCCCCAGGGAAGCGG",2,1.49,NA,NA,NA,NA,NA,NA,"stop","A89V L122* T148Y P161T V182M",5
"lib2","SARS-CoV-2","CGCCCCATTGTAAACC",2,11.36,6.13,-4.7,0.8,1.65,1.06,0.02,">1 nonsynonymous","V52C G86L S200I",3
"lib2","SARS-CoV-2","CGCCCCCTTAATAAGT",5,43.05,6.23,-4.6,0.35,2.27,1.13,0.01,">1 nonsynonymous","C31F Y143S",2
"lib2","SARS-CoV-2","CGCCCCGATAATCCAC",4,18.24,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S19Y R127L",2
"lib2","SARS-CoV-2","CGCCCGACGTTCGATA",2,18.18,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F12L Y35R N64D T100L V103M",5
"lib2","SARS-CoV-2","CGCCCGCATATGTGCT",21,79.47,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S45I F47L K56H F62S V103K L122W T201L",7
"lib2","SARS-CoV-2","CGCCCGTGCAGTCTTT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","R16D S43A L57* F70V",4
"lib2","SARS-CoV-2","CGCCCGTTTGAATACT",5,54.03,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C6A A81P I104F",3
"lib2","SARS-CoV-2","CGCCCTACAAAGGTAC",12,12.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13F A33P D97N F185S",4
"lib2","SARS-CoV-2","CGCCCTCAACTGGCAT",4,22.19,7.54,-3.3,0.14,1.94,1.06,0.01,">1 nonsynonymous","T55S S108F K199C",3
"lib2","SARS-CoV-2","CGCCCTCAAGTTTTAT",3,84.73,10.75,-0.09,0.04,2.99,1.03,0,">1 nonsynonymous","F62S S129T",2
"lib2","SARS-CoV-2","CGCCCTCGGTTTCGAA",4,11.43,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A105E E141S Y165C",3
"lib2","SARS-CoV-2","CGCCCTGGCTGCAGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","CGCCCTGGGTCTCAAA",6,46.38,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50S F160L G166M",3
"lib2","SARS-CoV-2","CGCCCTGTTCGGGCTT",2,8.05,10.6,-0.23,0.13,2.95,1.03,0.01,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","CGCCGAAAAAATCCAA",1,79.78,10.47,-0.37,0.06,2.88,1.06,0,">1 nonsynonymous","I104C P149T",2
"lib2","SARS-CoV-2","CGCCGAACAGTACGCA",6,77.64,7.31,-3.53,0.21,1.5,1.11,0.01,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","CGCCGAAGAGACTGCC",9,41.66,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N40P F99I A105C I142G",4
"lib2","SARS-CoV-2","CGCCGAATATAAACGA",2,25.3,10.7,-0.13,0.1,2.94,1.1,0,">1 nonsynonymous","I2K Q84S",2
"lib2","SARS-CoV-2","CGCCGAATGATGGTAC",3,85.49,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R136I C158A",2
"lib2","SARS-CoV-2","CGCCGACAAGCCAACA",5,69.18,10.83,-0.01,0.05,2.9,1.12,0,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","CGCCGACCAATGACCT",4,87.01,9.9,-0.93,0.11,2.29,1.06,0,"1 nonsynonymous","F17A",1
"lib2","SARS-CoV-2","CGCCGACCAGATATAT",5,37.94,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F12D S29R D90R Y119T F134V G152L G166A K198A",8
"lib2","SARS-CoV-2","CGCCGACCCAACATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R27S A81* G155N F167S K199E",5
"lib2","SARS-CoV-2","CGCCGAGATGACGGGT",3,53.9,7.03,-3.8,0.45,1.5,1.25,0.03,">1 nonsynonymous","V77K V173N R179A",3
"lib2","SARS-CoV-2","CGCCGATACCTTTGTC",3,7.61,6.23,-4.61,0.37,1.5,1.05,0,">1 nonsynonymous","R124S A145P",2
"lib2","SARS-CoV-2","CGCCGATAGACACCGG",10,93.8,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","G9W I28M G101R N107L",4
"lib2","SARS-CoV-2","CGCCGATTGAGACATA",1,14.06,10.62,-0.22,0.07,2.94,1.06,0,"1 nonsynonymous","L187P",1
"lib2","SARS-CoV-2","CGCCGATTTAGAATTA",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","CGCCGCACAAAACCTC",2,11.82,10.6,-0.24,0.06,3,1,0,"1 nonsynonymous","R16G",1
"lib2","SARS-CoV-2","CGCCGCATATAGCGAA",4,23.15,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A22T V71D Y143P T148H",4
"lib2","SARS-CoV-2","CGCCGCCTACAACATT",1,9.95,10.71,-0.13,0.1,2.8,1.18,0,">1 nonsynonymous","S41D P149Y",2
"lib2","SARS-CoV-2","CGCCGCTAAGGTCTCT",5,44.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q84L Y123V Q176E",3
"lib2","SARS-CoV-2","CGCCGGACCCTATTCA",7,98.72,10.9,0.07,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCGGCCCCAGTAAT",4,98.71,10.54,-0.29,0.03,2.87,1.09,0,">1 nonsynonymous","T55L L125F",2
"lib2","SARS-CoV-2","CGCCGGGAATTAAAAG",7,3.34,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","CGCCGGGTAACGCGTA",3,72.65,10.66,-0.17,0.05,2.9,1.08,0,">1 nonsynonymous","N40G Q163T",2
"lib2","SARS-CoV-2","CGCCGGTAACTCAACC",8,70.76,8.72,-2.12,0.08,2.76,1.1,0,">1 nonsynonymous","L5R S113V S147T",3
"lib2","SARS-CoV-2","CGCCGGTCCCCAGAAG",1,13.78,9.94,-0.89,0.14,2.38,1,0,">1 nonsynonymous","A18T T85H D90E S147W",4
"lib2","SARS-CoV-2","CGCCGTAAATATCATA",12,227.61,10.66,-0.18,0.02,2.97,1.03,0,"1 nonsynonymous","L57M",1
"lib2","SARS-CoV-2","CGCCGTAGAAGAAAAA",2,75.91,10.79,-0.05,0.04,2.92,1.06,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","CGCCGTCATAGCCCAA",4,14.22,6,-4.84,2,3,1.32,0.03,">1 nonsynonymous","A14W F47Y N64S N120F S129R G166V",6
"lib2","SARS-CoV-2","CGCCGTCCACGCATCA",9,96.26,10.73,-0.11,0.1,2.81,1.1,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","CGCCGTCCTAAGAATA",5,57.5,10.71,-0.13,0.05,2.88,1.13,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","CGCCGTTAAAATACAT",5,60.67,10.69,-0.15,0.03,2.89,1.12,0,"1 nonsynonymous","N64W",1
"lib2","SARS-CoV-2","CGCCGTTAACACAACA",2,0.59,NA,NA,NA,NA,NA,NA,"stop","Y66* N107F",2
"lib2","SARS-CoV-2","CGCCGTTATCCTGGAC",6,149.14,9.9,-0.94,0.04,2.88,1.06,0,">1 nonsynonymous","S36R F62L G174W P197S",4
"lib2","SARS-CoV-2","CGCCGTTCATTAATTA",12,55.11,6,-4.84,0.7,1.5,1.13,0.01,">1 nonsynonymous","N64P S108I G116L",3
"lib2","SARS-CoV-2","CGCCTAAAAAGGACTT",7,139.05,10.25,-0.59,0.03,3,1,0,"1 nonsynonymous","C31S",1
"lib2","SARS-CoV-2","CGCCTAACAGAACTAC",7,37.92,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N58S P96L W106R G172E P177Y P197V",6
"lib2","SARS-CoV-2","CGCCTAACCCATCCGT",2,16.88,9.36,-1.48,0.04,3,1,0,">1 nonsynonymous","G83L K87E",2
"lib2","SARS-CoV-2","CGCCTAAGATAAAAAC",1,30.34,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L111C K128L R179S",3
"lib2","SARS-CoV-2","CGCCTAATACAGGACC",3,30.49,10.73,-0.11,0.21,2.44,1.13,0.02,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","CGCCTACCATAAGTCA",7,126.25,10.64,-0.2,0.03,2.9,1.1,0,">1 nonsynonymous","S41Y T140C",2
"lib2","SARS-CoV-2","CGCCTACGTGGAAAAG",4,15.26,10.25,-0.58,0.05,2.95,1.03,0,">1 nonsynonymous","I2L A14Q K94H E141Q",4
"lib2","SARS-CoV-2","CGCCTAGACACTATTA",7,146.25,6,-4.84,0.54,1.5,1.1,0,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","CGCCTAGTGGCTAAAT",20,183.03,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9Y R27K G116R F167P V173F",5
"lib2","SARS-CoV-2","CGCCTATCCTAGCCCA",4,129.62,10.63,-0.21,0.03,2.91,1.04,0,">1 nonsynonymous","K26T A42H Y178A",3
"lib2","SARS-CoV-2","CGCCTATCTGTACTAC",12,99.6,9.01,-1.82,0.09,1.52,1.11,0,">1 nonsynonymous","N1Y G86S",2
"lib2","SARS-CoV-2","CGCCTATTAATACCAA",5,10.69,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","I104E R136M Y175L L188W A190R",5
"lib2","SARS-CoV-2","CGCCTATTATACGGTG",4,14.8,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","C102N",1
"lib2","SARS-CoV-2","CGCCTATTCTGCAATG",3,44.76,9.93,-0.9,0.09,2.74,1.02,0,">1 nonsynonymous","C61A K132E G152V",3
"lib2","SARS-CoV-2","CGCCTATTGTCGAACC",1,70.59,10.78,-0.06,0.07,2.93,1.04,0,"1 nonsynonymous","F44W",1
"lib2","SARS-CoV-2","CGCCTCAACAATTAGG",9,52.71,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A14E Y91T N110S V153P L162I Q163A T170W",7
"lib2","SARS-CoV-2","CGCCTCCCGATTGTAA",3,32.55,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A22T C61T F126E R136L",4
"lib2","SARS-CoV-2","CGCCTCGCTACAATAA",3,87.29,10.28,-0.56,0.11,2.65,1.09,0.01,">1 nonsynonymous","A22T T63I T201I",3
"lib2","SARS-CoV-2","CGCCTCTAGAGATCGC",7,1.06,NA,NA,NA,NA,NA,NA,"stop","G83* K94V",2
"lib2","SARS-CoV-2","CGCCTCTGAAGCAAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","F12L S19* K114E Y119L K128L",5
"lib2","SARS-CoV-2","CGCCTGACGTTATCAA",2,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47K D98S P133Y S200V",4
"lib2","SARS-CoV-2","CGCCTGACTCGCAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","V52R L57* R179S",3
"lib2","SARS-CoV-2","CGCCTGTGAACCCAAC",14,140.31,10.84,0,0.08,2.78,1.03,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","CGCCTGTTAAGCAGAC",3,18.53,10.83,0,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCCTTAAACGGGCCT",2,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N G172W",2
"lib2","SARS-CoV-2","CGCCTTAATGTTCGGC",5,5.26,NA,NA,NA,NA,NA,NA,"stop","Y91V L162*",2
"lib2","SARS-CoV-2","CGCCTTACGGGCATGA",1,77.94,6.15,-4.69,0.65,1.5,1.1,0.01,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","CGCCTTATAATGACGT",1,30.05,6.42,-4.42,0.47,1.5,1.15,0.01,">1 nonsynonymous","C6V P7A A105T I142K",4
"lib2","SARS-CoV-2","CGCCTTGACCTTAATG",5,40.13,10.03,-0.8,0.07,2.68,1.05,0,">1 nonsynonymous","T3I A22V K56E",3
"lib2","SARS-CoV-2","CGCCTTGCACATACTG",4,1.19,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib2","SARS-CoV-2","CGCCTTGCGAGGTAAC",6,27.28,7.08,-3.75,0.31,1.5,1.08,0.03,">1 nonsynonymous","V52Y P82I S113T",3
"lib2","SARS-CoV-2","CGCCTTGCTACTTTAC",3,24.03,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D90E F134L R179W S200P",4
"lib2","SARS-CoV-2","CGCCTTTACAAAATAA",1,17.81,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S36M S43V N92D N107L L122T",5
"lib2","SARS-CoV-2","CGCGAAAAAAGTCGAT",3,32.36,7.18,-3.65,0.24,1.5,1.07,0.01,">1 nonsynonymous","C6L T100K I138L S164D",4
"lib2","SARS-CoV-2","CGCGAAAACGACCGGC",4,105.82,9.85,-0.99,0.05,2.89,1.04,0,">1 nonsynonymous","F12I N118A T201D",3
"lib2","SARS-CoV-2","CGCGAAAAGGACAAGT",1,10.3,6,-4.84,2,3,1.27,0.02,">1 nonsynonymous","L60V N107Y",2
"lib2","SARS-CoV-2","CGCGAAACGAATTCAG",7,169.87,10.8,-0.04,0.04,2.96,1.05,0,">1 nonsynonymous","K56E K128M",2
"lib2","SARS-CoV-2","CGCGAAAGCTACGAAC",1,7.83,6.37,-4.46,0.83,2.21,1.3,0.03,">1 nonsynonymous","A18L R136T C195E",3
"lib2","SARS-CoV-2","CGCGAACAGCTGAAAA",5,41.72,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L38M T85L L95R Q176L",4
"lib2","SARS-CoV-2","CGCGAACAGGAGATAC",9,65.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A V37F G51C K128S",4
"lib2","SARS-CoV-2","CGCGAACATGGTTATA",4,56.53,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","N64V Y178P",2
"lib2","SARS-CoV-2","CGCGAAGATAACTCAC",2,21.53,10.61,-0.23,0.04,3,1,0,">1 nonsynonymous","P149I F160N",2
"lib2","SARS-CoV-2","CGCGAAGTAATAGATC",1,8.71,6,-4.84,2,1.5,1.12,0.02,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","CGCGAAGTGACAGGTT",2,17.88,10.87,0.03,0.1,2.99,1.05,0,"1 nonsynonymous","L131V",1
"lib2","SARS-CoV-2","CGCGAATAGAGTGATA",4,49.9,8.58,-2.26,0.13,2.43,1.02,0.01,">1 nonsynonymous","L60K T148S T170H F185Y",4
"lib2","SARS-CoV-2","CGCGAATTAATGAAAA",8,128.91,8.85,-1.99,0.06,2.88,1.1,0,">1 nonsynonymous","C61G Y119L",2
"lib2","SARS-CoV-2","CGCGACAACAAAAATC",2,25.42,10.76,-0.08,0.07,2.88,1.1,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","CGCGACAGAATGACGG",6,0.44,NA,NA,NA,NA,NA,NA,"stop","D68E P82L C150W Q168*",4
"lib2","SARS-CoV-2","CGCGACATTCTCTAAT",1,17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V71Q E141R",2
"lib2","SARS-CoV-2","CGCGACGAATATGGTT",1,1.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51D",1
"lib2","SARS-CoV-2","CGCGAGAAAACTACAT",6,37.33,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14E S43L A89L P149C",4
"lib2","SARS-CoV-2","CGCGAGAAGATAAAAC",5,14.3,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V65Q F99C Y119V C158D",4
"lib2","SARS-CoV-2","CGCGAGACCAGTCTAA",5,77.93,8.73,-2.1,0.11,2.79,1.18,0,">1 nonsynonymous","G117P L125F",2
"lib2","SARS-CoV-2","CGCGAGACCATGAGAA",2,39.24,10.16,-0.68,0.04,2.93,1.06,0,">1 nonsynonymous","V65L Y121L S184Q A192D",4
"lib2","SARS-CoV-2","CGCGAGTCAACCTCAT",3,38.68,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N92T C102V",2
"lib2","SARS-CoV-2","CGCGATAACGTCCATC",1,21.22,10.71,-0.13,0.08,2.89,1.07,0,">1 nonsynonymous","L5E G116L",2
"lib2","SARS-CoV-2","CGCGATAATAAGTTAA",9,72.84,8.54,-2.3,0.1,2.44,1.08,0,">1 nonsynonymous","C6D L60W Q168N",3
"lib2","SARS-CoV-2","CGCGATAATCGACATC",11,22.52,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","S36M T55W T85L V103L V173G L187P",6
"lib2","SARS-CoV-2","CGCGATAGACCAGTAT",7,82.58,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","E10W N92L N120S",3
"lib2","SARS-CoV-2","CGCGATCCTAGCATAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74S R179V",2
"lib2","SARS-CoV-2","CGCGATTAAAGCCCTA",3,4.61,NA,NA,NA,NA,NA,NA,"stop","L5F N13I S41L L95Q N157*",5
"lib2","SARS-CoV-2","CGCGATTACAAGCCTC",1,14.64,10.49,-0.34,0.09,2.61,1.36,0,">1 nonsynonymous","T100L E135G Q163L",3
"lib2","SARS-CoV-2","CGCGATTCAATCCAGT",8,322.72,10.8,-0.04,0.05,2.91,1.11,0,"1 nonsynonymous","S184H",1
"lib2","SARS-CoV-2","CGCGATTCATAATATG",3,22.36,8.55,-2.29,0.25,1.5,1,0.03,">1 nonsynonymous","R127T I138N",2
"lib2","SARS-CoV-2","CGCGATTTTAAACTAA",4,162.59,10.82,-0.02,0.07,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCGCAACCCATGAGA",7,136.41,10.66,-0.18,0.03,2.89,1.13,0,">1 nonsynonymous","S129C I138M",2
"lib2","SARS-CoV-2","CGCGCAAGTGATGCAG",10,2.64,NA,NA,NA,NA,NA,NA,"stop","T100L I138*",2
"lib2","SARS-CoV-2","CGCGCACTTTTTCTCT",2,7.67,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","D34R K48D Y121V E154C",4
"lib2","SARS-CoV-2","CGCGCAGGAACTATTC",2,12.03,10.74,-0.09,0.08,2.88,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCGCATAATGATCGG",4,103.31,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I28G Y91C Y123C N151D N157L",5
"lib2","SARS-CoV-2","CGCGCATCACTCCCTA",1,11.9,10.6,-0.24,0.37,2,1.17,0.05,">1 nonsynonymous","D59A E76R T201M",3
"lib2","SARS-CoV-2","CGCGCATTAACTTCTG",8,121.39,10.76,-0.07,0.03,2.95,1.07,0,"1 nonsynonymous","N64F",1
"lib2","SARS-CoV-2","CGCGCCACCCAGACTG",2,14.53,7.95,-2.89,0.34,1.5,1.26,0.04,">1 nonsynonymous","P96A P177A P191I",3
"lib2","SARS-CoV-2","CGCGCCATTGAATCCT",5,131.09,10.85,0.01,0.05,2.91,1.09,0,">1 nonsynonymous","R16T T55G S200R",3
"lib2","SARS-CoV-2","CGCGCCTAAACACAAG",6,95.33,9.5,-1.33,0.06,2.31,1.01,0,">1 nonsynonymous","L60Q K87M W106R",3
"lib2","SARS-CoV-2","CGCGCCTCCTGAATTA",8,151.42,10.29,-0.55,0.04,2.9,1.07,0,">1 nonsynonymous","G116F P149S",2
"lib2","SARS-CoV-2","CGCGCCTGACTAGCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* S69V N92Y L111P",4
"lib2","SARS-CoV-2","CGCGCGAAAAAAAACT",6,30.74,8.67,-2.16,0.27,1.5,1.02,0.03,">1 nonsynonymous","A14P S41P N107A",3
"lib2","SARS-CoV-2","CGCGCGAAGCACTCCG",10,170.73,10.81,-0.02,0.05,2.94,1.08,0,">1 nonsynonymous","N4S N64S",2
"lib2","SARS-CoV-2","CGCGCGACCACGTAGA",4,82.7,10.7,-0.13,0.08,2.87,1.09,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","CGCGCGTGTTATAACA",4,6.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S F99S N107V",3
"lib2","SARS-CoV-2","CGCGCTAATTTTACGG",3,7.54,NA,NA,NA,NA,NA,NA,"stop","K87* S147Q",2
"lib2","SARS-CoV-2","CGCGCTAGAATGGGAA",1,21.82,7.63,-3.2,0.29,1.5,1.13,0.03,">1 nonsynonymous","R16V F99T L111I",3
"lib2","SARS-CoV-2","CGCGCTATCCTACGAG",1,34.5,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","W106T K114M Q176L",3
"lib2","SARS-CoV-2","CGCGCTATTAAAGCAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K N151C",2
"lib2","SARS-CoV-2","CGCGCTCTATATAGAC",1,47.58,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T63D I88F Q144G",3
"lib2","SARS-CoV-2","CGCGCTGTGATATCAG",11,149.81,6.02,-4.82,0.95,1.5,1.17,0.01,">1 nonsynonymous","D112I K128V G146R",3
"lib2","SARS-CoV-2","CGCGCTTCCACGTCAG",8,151.37,10.36,-0.48,0.04,2.92,1.08,0,">1 nonsynonymous","T46M T148C",2
"lib2","SARS-CoV-2","CGCGGACAGCTTTATG",4,27.49,8.63,-2.21,0.13,3,1.08,0.01,"1 nonsynonymous","F126G",1
"lib2","SARS-CoV-2","CGCGGAGAGTTGATAC",3,25.74,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","I2L A42P D59L R73S I88N",5
"lib2","SARS-CoV-2","CGCGGAGCCCCGTGAT",6,0,NA,NA,NA,NA,NA,NA,"stop","F62M T100G W106* F167R",4
"lib2","SARS-CoV-2","CGCGGATAAATGGTTA",5,40.42,9.7,-1.14,0.11,1.93,1.06,0.01,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","CGCGGATGACCCTCTA",2,8.85,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","F17Y V77R E135R P149T",4
"lib2","SARS-CoV-2","CGCGGATGCCCACATA",16,117.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2M S41L D59P V71R G101L K128S",6
"lib2","SARS-CoV-2","CGCGGCACTAATGAGC",3,77.34,6.9,-3.93,0.33,1.51,1.19,0.02,">1 nonsynonymous","D112S L188W",2
"lib2","SARS-CoV-2","CGCGGCTTCTATATCT",2,19.43,9.63,-1.21,0.04,2.98,1,0,">1 nonsynonymous","S139N G146T",2
"lib2","SARS-CoV-2","CGCGGGATGGCTTTCA",3,16.51,8.5,-2.33,0.18,2.95,1.04,0.01,">1 nonsynonymous","Y175C T201E",2
"lib2","SARS-CoV-2","CGCGGGATTTGCAAGT",1,23.13,9.73,-1.11,0.04,2.95,1,0,">1 nonsynonymous","P7S D97C E141R K199R",4
"lib2","SARS-CoV-2","CGCGGGCATATAGAAA",2,6.3,10.15,-0.69,0.22,2.41,1.02,0.01,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","CGCGGGCGCCATACCA",5,110.09,7.3,-3.54,0.22,1.5,1.13,0.01,">1 nonsynonymous","I28L Y35F G86C G152R",4
"lib2","SARS-CoV-2","CGCGGGGCCAAATATT",3,13.4,10.83,0,0.08,3,1.06,0,"1 nonsynonymous","T55Q",1
"lib2","SARS-CoV-2","CGCGGTCAAACGGACT",6,139.3,10.75,-0.08,0.05,2.95,1.05,0,">1 nonsynonymous","H189F T201C",2
"lib2","SARS-CoV-2","CGCGGTCTAAGACTTA",4,33.43,10.25,-0.59,0.12,2.23,1.03,0.01,">1 nonsynonymous","L5R W106R",2
"lib2","SARS-CoV-2","CGCGGTTAAGAAAACA",1,0.82,NA,NA,NA,NA,NA,NA,"stop","I28M L162* L188Q",3
"lib2","SARS-CoV-2","CGCGTAATTCTATACC",4,130.95,10.47,-0.36,0.05,2.86,1.06,0,">1 nonsynonymous","S36L A105S I138N",3
"lib2","SARS-CoV-2","CGCGTACTTTCAACGA",11,119.42,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A22E Y35K S41T K48Y D112F",5
"lib2","SARS-CoV-2","CGCGTAGCTAAGAGAA",6,39.07,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","A42D S43L C49F D97F Y178K A190C",6
"lib2","SARS-CoV-2","CGCGTCACAGCACGAA",14,49.74,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S29N V103D P149G",3
"lib2","SARS-CoV-2","CGCGTCATATGGTGAA",3,24.11,6,-4.84,1.56,3,1.23,0.01,">1 nonsynonymous","E10H S29D L95T S139I",4
"lib2","SARS-CoV-2","CGCGTCATTAACTATA",10,95.68,9.09,-1.74,0.06,1.74,1.08,0,">1 nonsynonymous","I28S T100N",2
"lib2","SARS-CoV-2","CGCGTCTTCGACAAAT",3,49.14,9.53,-1.31,0.11,1.89,1.1,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","CGCGTGAGTAGTGTTC",3,61.71,10.87,0.03,0.05,2.97,1.04,0,">1 nonsynonymous","I2L S36A",2
"lib2","SARS-CoV-2","CGCGTGAGTCGAACTG",4,19.4,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","I2V D68G A81D A105V Y159L F185V",6
"lib2","SARS-CoV-2","CGCGTGGTTAGAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","N30* Y93F",2
"lib2","SARS-CoV-2","CGCGTGGTTGGCAGAT",3,30.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10Y K114L L125R P161F",4
"lib2","SARS-CoV-2","CGCGTTAACCGCGTGC",1,43.88,10.81,-0.02,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCGTTACACCCGTGA",6,162.44,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8P S29M F62G G166Y",4
"lib2","SARS-CoV-2","CGCGTTAGAAAATTAA",4,19.08,6.56,-4.28,1.02,1.5,1.24,0.06,">1 nonsynonymous","K48Q C61Y V71S G83S F99S S108M N157D",7
"lib2","SARS-CoV-2","CGCGTTAGAAGTTGAT",6,27.5,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","D90K W106T E135L Q144S",4
"lib2","SARS-CoV-2","CGCGTTCCCAATGGCT",12,248.7,9.08,-1.76,0.06,2.72,1.08,0,">1 nonsynonymous","Y91S S129Q F156L",3
"lib2","SARS-CoV-2","CGCGTTCTCAACAAAT",8,11.7,NA,NA,NA,NA,NA,NA,"stop","C61* Y143R",2
"lib2","SARS-CoV-2","CGCGTTTTTGAGCTCT",1,32.76,7.62,-3.22,0.15,2.34,1.07,0.01,">1 nonsynonymous","N64V C158Q",2
"lib2","SARS-CoV-2","CGCTAAAAACCTAGAA",4,150.04,10.31,-0.53,0.04,2.85,1.09,0,">1 nonsynonymous","D98Y N120S",2
"lib2","SARS-CoV-2","CGCTAAAAAGTTACTG",9,65.03,10.67,-0.17,0.03,3,1.01,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CGCTAAACTTAAAAAA",2,16.62,9.96,-0.88,0.11,2.81,1.13,0.01,">1 nonsynonymous","D34R E141T",2
"lib2","SARS-CoV-2","CGCTAAACTTGGGTTC",1,26.78,10.78,-0.05,0.09,2.94,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGCTAAAGAGATGTGG",1,12,9.31,-1.52,0.31,1.57,1.33,0.03,">1 nonsynonymous","W106K Q144V",2
"lib2","SARS-CoV-2","CGCTAAAGTTAAATTC",1,6.52,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","L162P",1
"lib2","SARS-CoV-2","CGCTAAATGCGAAATT",8,72.04,10.72,-0.12,0.03,2.96,1.04,0,"1 nonsynonymous","R78F",1
"lib2","SARS-CoV-2","CGCTAAGCAATTAGCC",4,0.95,NA,NA,NA,NA,NA,NA,"stop","T3K S41F Y91* N120Y",4
"lib2","SARS-CoV-2","CGCTAAGCTACCCGAA",3,19.11,7.96,-2.88,0.35,1.5,1.08,0.06,"1 nonsynonymous","P82E",1
"lib2","SARS-CoV-2","CGCTAATATTAACTAA",6,15.16,9.75,-1.09,0.24,1.5,1,0.03,">1 nonsynonymous","T3G I28Y P82Y",3
"lib2","SARS-CoV-2","CGCTAATCTTATACAC",2,15.68,8.3,-2.54,0.19,1.62,1.13,0.02,">1 nonsynonymous","Q84R K94L",2
"lib2","SARS-CoV-2","CGCTAATTTGCTCACA",6,28.11,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","E10N A105L",2
"lib2","SARS-CoV-2","CGCTACAACAAACAAT",6,95.4,10.48,-0.35,0.03,2.91,1.09,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","CGCTACAAGCGATACT",9,135.45,10.85,0.02,0.05,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTACACATTGCGCA",7,104.77,8.36,-2.48,0.1,2.38,1.13,0,">1 nonsynonymous","I2L V37T L95V K114R N157R",5
"lib2","SARS-CoV-2","CGCTACACTTACCGAG",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Y50F",2
"lib2","SARS-CoV-2","CGCTACAGGTTATGAC",13,164.9,10.85,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTACAGGTTCTAAT",5,44.73,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D98N D112S V182S",3
"lib2","SARS-CoV-2","CGCTACATAACCAAAA",9,143.4,9.96,-0.88,0.03,2.7,1.06,0,">1 nonsynonymous","A14I A18E L57M A192S",4
"lib2","SARS-CoV-2","CGCTACCAAGTACTCG",1,32.62,8.08,-2.75,0.49,1.5,1.03,0.08,"1 nonsynonymous","Y93H",1
"lib2","SARS-CoV-2","CGCTACCTTTTAATGA",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59I Y91V F99Q",3
"lib2","SARS-CoV-2","CGCTACGACACCAAGC",4,85.27,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20C D98E C158S",3
"lib2","SARS-CoV-2","CGCTACGCTTTTTCAA",12,2.58,NA,NA,NA,NA,NA,NA,"stop","K87* K94T",2
"lib2","SARS-CoV-2","CGCTACGGCGAACACA",1,45,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N40R I142Q P161R",3
"lib2","SARS-CoV-2","CGCTACGTCAGGTATA",6,22.48,6,-4.84,1.19,1.5,1.13,0.01,">1 nonsynonymous","D59V N120V I142M F185S",4
"lib2","SARS-CoV-2","CGCTACGTTAATATCC",2,33.77,9.78,-1.05,0.07,2.9,1.04,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","CGCTACTAATTGTGTA",1,78.68,10.62,-0.22,0.03,2.89,1.11,0,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","CGCTACTGAACAAAAA",3,43.32,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","T3M V20P V37M N107A V115P P169N R179C",7
"lib2","SARS-CoV-2","CGCTACTGCTCGCTTG",4,16.94,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y50T I80K V115S Y121V",4
"lib2","SARS-CoV-2","CGCTACTTAACCCCAT",4,221.8,10.4,-0.43,0.03,2.93,1.07,0,">1 nonsynonymous","K87L N151K",2
"lib2","SARS-CoV-2","CGCTACTTAACTATGT",12,376.47,10.28,-0.56,0.03,2.9,1.07,0,">1 nonsynonymous","Y91H T201Y",2
"lib2","SARS-CoV-2","CGCTAGATCGCTCCTA",5,64.39,11.06,0.22,0.09,2.92,1.09,0,">1 nonsynonymous","N4S T55D Y91F Y123K",4
"lib2","SARS-CoV-2","CGCTAGTTAACCCTAA",5,44.5,10.87,0.04,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTATACTACATGTC",1,13.39,10.35,-0.48,0.11,2.86,1,0.01,"1 nonsynonymous","E135K",1
"lib2","SARS-CoV-2","CGCTATAGTTATAATG",10,71.23,10.32,-0.51,0.07,2.75,1,0,">1 nonsynonymous","Y35T S45Q",2
"lib2","SARS-CoV-2","CGCTATATTACTTGTA",1,49.75,9.15,-1.68,0.1,2.61,1.18,0,">1 nonsynonymous","E10V S53Y G174K",3
"lib2","SARS-CoV-2","CGCTATCAAAAGGGTG",1,30.89,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","I80G R124H F160T K198T",4
"lib2","SARS-CoV-2","CGCTATCAACTGTCAT",2,57.59,7.34,-3.5,0.29,1.5,1.21,0.02,">1 nonsynonymous","W23S F62S",2
"lib2","SARS-CoV-2","CGCTATCCTATATGAT",5,30.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19M K94E W106F F167Y G174V",5
"lib2","SARS-CoV-2","CGCTATCTATATAGAG",1,52.6,10.82,-0.01,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTATGGTACGCTTA",7,30.62,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","W106S R124A",2
"lib2","SARS-CoV-2","CGCTATTACACCTATA",6,112.72,10.82,-0.02,0.06,2.89,1.1,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","CGCTATTCAAATCTAA",5,28.52,10.69,-0.14,0.07,2.9,1.12,0,">1 nonsynonymous","A33V L60V",2
"lib2","SARS-CoV-2","CGCTATTGGAACTAAA",1,28.18,6.43,-4.41,0.54,1.5,1.2,0.02,">1 nonsynonymous","F44R D68Y G174Q",3
"lib2","SARS-CoV-2","CGCTCAAAATTGAGAC",3,34.32,9.41,-1.42,0.13,2.07,1.09,0.01,">1 nonsynonymous","C61A K94G",2
"lib2","SARS-CoV-2","CGCTCAACAATCACGG",1,15.86,7.29,-3.55,0.4,1.78,1.1,0.04,">1 nonsynonymous","Q168P T201G",2
"lib2","SARS-CoV-2","CGCTCAACACCTGTAT",20,3.13,NA,NA,NA,NA,NA,NA,"stop","E10A G86K G101T G117*",4
"lib2","SARS-CoV-2","CGCTCAAGTACTAAAG",4,0.72,NA,NA,NA,NA,NA,NA,"stop","F8* N24V N30L V37* W106F C150S V180A",7
"lib2","SARS-CoV-2","CGCTCAAGTGCATACA",6,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S V52I Q144L",3
"lib2","SARS-CoV-2","CGCTCAATATTGATAC",3,0,NA,NA,NA,NA,NA,NA,"stop","I72P A89* P149L G152N",4
"lib2","SARS-CoV-2","CGCTCACTGGCTTGAG",10,32.69,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F12S L60H L111T G155I",4
"lib2","SARS-CoV-2","CGCTCAGCAAAAGTTC",3,7.81,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","D90R D137Y",2
"lib2","SARS-CoV-2","CGCTCAGGAGATGATA",8,55.29,10.92,0.08,0.04,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTCAGTCTCTGAAA",2,7.21,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","T3I E10R Y50T G83S",4
"lib2","SARS-CoV-2","CGCTCATCGGGAAAAC",2,38.45,10.81,-0.02,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTCATGACCTCTTT",1,5.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10V T15F F47I F62E",4
"lib2","SARS-CoV-2","CGCTCATTCCGTTAAA",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T R127A P149R",3
"lib2","SARS-CoV-2","CGCTCATTTCACCAAC",3,46.27,10.77,-0.06,0.06,2.78,1.24,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTCCAAAAGACACT",4,50.05,6,-4.84,1.68,1.5,1.19,0.01,">1 nonsynonymous","S45A W106L F126S K199M",4
"lib2","SARS-CoV-2","CGCTCCAAATATCTGT",3,102.01,10.42,-0.41,0.05,2.87,1.06,0,"1 nonsynonymous","V20A",1
"lib2","SARS-CoV-2","CGCTCCAATGACCCAC",5,91.57,10.85,0.02,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTCCCGGAGACGTT",7,87.85,10.6,-0.24,0.04,2.98,1.01,0,">1 nonsynonymous","G9W T55N G152A",3
"lib2","SARS-CoV-2","CGCTCCTAACTGCACA",1,48.1,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","L38C G86L Y123S T148P",4
"lib2","SARS-CoV-2","CGCTCCTATCTAGTCA",10,117.65,10.25,-0.59,0.04,2.89,1.04,0,">1 nonsynonymous","Y35G S129V",2
"lib2","SARS-CoV-2","CGCTCGCAACCATACT",3,24.46,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C61V F70Q D90S P197F",4
"lib2","SARS-CoV-2","CGCTCGGGACAAAGAA",3,14.35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4R W23T I104C D112L",4
"lib2","SARS-CoV-2","CGCTCGGGCTATGTGG",2,24.86,10.82,-0.02,0.07,2.84,1.2,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","CGCTCTAAAAGTGCGA",2,53.75,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10G W23N R73Y R127H I138Y",5
"lib2","SARS-CoV-2","CGCTCTAACTTTCGAT",9,11.21,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","R25A A105P D137G S147P P169S L183S T201W",7
"lib2","SARS-CoV-2","CGCTCTAAGACAACTG",3,24.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L38H F62D G74N D90P S139P K199I",6
"lib2","SARS-CoV-2","CGCTCTAGTGATGCAA",13,134.61,9.08,-1.76,0.08,2.29,1.13,0,">1 nonsynonymous","L5Y D112L",2
"lib2","SARS-CoV-2","CGCTCTATAATCTGGG",5,56.03,9.05,-1.79,0.15,1.59,1.13,0.01,">1 nonsynonymous","G51A A81V",2
"lib2","SARS-CoV-2","CGCTCTCACAACCAAA",3,34.17,8.61,-2.23,0.13,2.83,1.06,0.01,">1 nonsynonymous","Y39M S139G Q168D P169H V173F",5
"lib2","SARS-CoV-2","CGCTCTCTTGACCAAT",12,5.91,NA,NA,NA,NA,NA,NA,"stop","V77G N107Y F134R T201*",4
"lib2","SARS-CoV-2","CGCTCTCTTTCAAAAA",12,123.48,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V65S L162A",2
"lib2","SARS-CoV-2","CGCTCTGTTCAAAAAA",1,35.28,10.37,-0.46,0.08,2.86,1.05,0,">1 nonsynonymous","G83S D90K",2
"lib2","SARS-CoV-2","CGCTGAATGCACATAG",6,1.11,NA,NA,NA,NA,NA,NA,"stop","D34N Q84* I104* Y165L",4
"lib2","SARS-CoV-2","CGCTGACAACGTTTAT",7,37.17,8.92,-1.92,0.22,1.5,1,0.02,">1 nonsynonymous","F70Y L162V",2
"lib2","SARS-CoV-2","CGCTGACAACTGAATC",6,1.13,NA,NA,NA,NA,NA,NA,"stop","T63* Q79H P96Y L131P F156S V173M Y178C",7
"lib2","SARS-CoV-2","CGCTGACTGGACACGA",5,35.48,9,-1.83,0.14,1.85,1.1,0.01,">1 nonsynonymous","N1K F17S N40R N151E",4
"lib2","SARS-CoV-2","CGCTGAGACAACTTTC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A18K G51F C61Y G86H Y91* W106F",6
"lib2","SARS-CoV-2","CGCTGAGCTCCCCACT",8,23.47,9.18,-1.66,0.14,2.18,1.03,0.01,">1 nonsynonymous","W106V V115W",2
"lib2","SARS-CoV-2","CGCTGAGGACGCCTGC",10,168.68,10.3,-0.54,0.04,2.86,1.07,0,">1 nonsynonymous","S41F N58S K128I",3
"lib2","SARS-CoV-2","CGCTGAGGACTAAAAT",5,53.07,6.86,-3.98,0.24,1.86,1.11,0.01,">1 nonsynonymous","G9I A33S A89V Y119Q",4
"lib2","SARS-CoV-2","CGCTGAGTATGCCAAG",5,63.45,10.62,-0.22,0.03,2.96,1.06,0,"1 nonsynonymous","R27W",1
"lib2","SARS-CoV-2","CGCTGAGTCCAAAAAG",3,88.48,10.01,-0.83,0.06,2.6,1.09,0,">1 nonsynonymous","K48Y D59G",2
"lib2","SARS-CoV-2","CGCTGATACATCAATG",5,21.46,9.5,-1.33,0.3,1.54,1.17,0.05,">1 nonsynonymous","A33S A42H P96E E154S T201A",5
"lib2","SARS-CoV-2","CGCTGATACATCAGGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66C Q84S K94M I104C Y119S G146V R179F",7
"lib2","SARS-CoV-2","CGCTGATATTAAGACA",1,31.7,6,-4.84,2,1.5,1.21,0.04,"1 nonsynonymous","L131R",1
"lib2","SARS-CoV-2","CGCTGATCTTCACACA",3,71.47,7.05,-3.79,0.43,1.57,1.26,0.06,">1 nonsynonymous","Q144L P177S",2
"lib2","SARS-CoV-2","CGCTGCAACTTGAGCA",5,68.09,9.19,-1.65,0.05,2.95,1.07,0,">1 nonsynonymous","V52Y Y119T",2
"lib2","SARS-CoV-2","CGCTGCGATTCATGAA",8,44.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36A K56T L95D",3
"lib2","SARS-CoV-2","CGCTGCGGCAATCTAT",1,14.22,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R27G A33S G86K D90P Y119T",5
"lib2","SARS-CoV-2","CGCTGCTTACCGAATA",1,35.98,6,-4.84,1.04,1.5,1.15,0.01,">1 nonsynonymous","D68R G155T Y178L K198A",4
"lib2","SARS-CoV-2","CGCTGGAAAAAAAACA",1,26.34,10.78,-0.06,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTGGCAGGCTCTAC",1,28.04,10.66,-0.17,0.06,2.91,1.1,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","CGCTGGGAGGTAATGA",2,12.95,8.2,-2.64,0.16,2.05,1.01,0.01,">1 nonsynonymous","D112V Y121L",2
"lib2","SARS-CoV-2","CGCTGGTACAAAAATT",6,1.82,NA,NA,NA,NA,NA,NA,"stop","G51A R124Q E154Y S200*",4
"lib2","SARS-CoV-2","CGCTGGTCAAAGATAA",12,48.65,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V37C D68K D112K",3
"lib2","SARS-CoV-2","CGCTGTAAATATCGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","K56R N110*",2
"lib2","SARS-CoV-2","CGCTGTAATAATCTGA",10,70.73,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V11L N58T F99L S139L L162V",5
"lib2","SARS-CoV-2","CGCTGTACGATATTGG",9,38.28,9.09,-1.74,0.07,2.95,1.04,0,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","CGCTTAACAAGAGAAA",7,36.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13L L162A V181L",3
"lib2","SARS-CoV-2","CGCTTAACCGTAGCCC",4,92.53,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40V G101L P177L",3
"lib2","SARS-CoV-2","CGCTTAAGTTAACTGA",2,21.52,10.86,0.02,0.08,3,1.02,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","CGCTTACAAACGAATT",3,53.33,10.87,0.03,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CGCTTACGAATCAATA",2,24.58,10.87,0.04,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGCTTAGTTTTCGAAA",3,43.31,10.47,-0.36,0.06,2.88,1.04,0,">1 nonsynonymous","L5E A18T K26Q",3
"lib2","SARS-CoV-2","CGCTTATACATGAAAA",3,63.37,10.48,-0.36,0.05,2.9,1.11,0,">1 nonsynonymous","E10D D97W T148D",3
"lib2","SARS-CoV-2","CGCTTATATCAACTCA",7,2.24,NA,NA,NA,NA,NA,NA,"stop","T15* R73E L131F E154R",4
"lib2","SARS-CoV-2","CGCTTATGAACGACAA",10,103.7,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25Y F62C V115H L125V R136Y",5
"lib2","SARS-CoV-2","CGCTTATGGTCAAATG",2,25.18,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D34G F70I A81L Y159D P169S",5
"lib2","SARS-CoV-2","CGCTTCAGTGTTACGC",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E T15C Y35C I72K E154I",5
"lib2","SARS-CoV-2","CGCTTCATATTTCTAT",12,73.34,10.02,-0.81,0.05,2.93,1.05,0,">1 nonsynonymous","T63Q K114G",2
"lib2","SARS-CoV-2","CGCTTCCCTTATCAGA",5,7.51,NA,NA,NA,NA,NA,NA,"stop","A14T Y21* K94N",3
"lib2","SARS-CoV-2","CGCTTCCGCCTCGGAG",1,23.89,9.08,-1.76,0.12,1.99,1.01,0.01,">1 nonsynonymous","A14T D98C L111Y F126M",4
"lib2","SARS-CoV-2","CGCTTCGCGATAAAAT",3,49.57,8.6,-2.24,0.06,2.02,1.12,0,"1 nonsynonymous","Y165T",1
"lib2","SARS-CoV-2","CGCTTCTATGGAACTT",6,120.17,8.72,-2.11,0.06,1.52,1.09,0,">1 nonsynonymous","N24I F44R D75E",3
"lib2","SARS-CoV-2","CGCTTGAAAAGCGTTA",7,18.34,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L95A N107L G152L",3
"lib2","SARS-CoV-2","CGCTTGAGCAAAGTTT",5,25.24,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5R S41E C49S D75R Y123K F167D",6
"lib2","SARS-CoV-2","CGCTTGGACAAGAGAT",4,11.72,9.6,-1.23,0.13,1.79,1.05,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","CGCTTGGACACACAGG",5,40.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9M T55W Y121W Q144T P161M",5
"lib2","SARS-CoV-2","CGCTTGGCTAATAAAG",4,16.8,6.29,-4.54,0.45,1.63,1.09,0.01,">1 nonsynonymous","D90N W106V L122I S129A G146A Q163D",6
"lib2","SARS-CoV-2","CGCTTGTCGCACCACC",9,38.82,8.57,-2.26,0.23,1.5,1.12,0.02,">1 nonsynonymous","A14C F44V T63K I104S",4
"lib2","SARS-CoV-2","CGCTTTAATAATTATG",4,58.88,9.95,-0.88,0.04,2.93,1,0,">1 nonsynonymous","Y35V G116F G152D",3
"lib2","SARS-CoV-2","CGCTTTAATACAAAAA",10,208.3,10.57,-0.26,0.03,2.94,1.04,0,">1 nonsynonymous","P7H P149M",2
"lib2","SARS-CoV-2","CGCTTTCAAAGTATTT",5,41.31,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39D V103F G174S",3
"lib2","SARS-CoV-2","CGCTTTCTATAAAGTC",1,6.3,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","Y50W T55M V71Q Q84F Y119R E141S P197M",7
"lib2","SARS-CoV-2","CGCTTTGACTTTAAAT",9,155.4,10.79,-0.05,0.05,2.87,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","CGCTTTGAGGACGTAA",4,40.29,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S19T A33L Y93M T140I E154R",5
"lib2","SARS-CoV-2","CGCTTTTAAATTTTCG",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L G86K K132V",3
"lib2","SARS-CoV-2","CGCTTTTGAAAACAAA",5,93.03,8.99,-1.85,0.07,2.8,1.13,0,">1 nonsynonymous","Y143T T201K",2
"lib2","SARS-CoV-2","CGGAAAAAATTAAATC",7,236.02,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G83Q K94P F134I Q176V",4
"lib2","SARS-CoV-2","CGGAAAAATTAGCATG",7,45.09,10.02,-0.81,0.09,2.1,1.07,0,">1 nonsynonymous","N4S D98T P133Q",3
"lib2","SARS-CoV-2","CGGAAAACAATGATCC",5,3.24,NA,NA,NA,NA,NA,NA,"stop","D68L D98R W106G S129* R136L F156P",6
"lib2","SARS-CoV-2","CGGAAAACCACCTCCG",1,9.41,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C61T D90N D97S R179M",4
"lib2","SARS-CoV-2","CGGAAAAGGTGTATTG",4,13.76,NA,NA,NA,NA,NA,NA,"stop","Y39C I88T N157* T201I",4
"lib2","SARS-CoV-2","CGGAAAATAGCCATGT",12,230.33,10.76,-0.07,0.04,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGAAAATCCCTACTA",1,12.83,9.47,-1.37,0.26,1.98,1.04,0.04,">1 nonsynonymous","D98A W106R",2
"lib2","SARS-CoV-2","CGGAAACAAAGAATCA",1,6.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44M A105R Y175A",3
"lib2","SARS-CoV-2","CGGAAACAAGGCACAA",5,12.52,6,-4.84,2,3,1.36,0.03,">1 nonsynonymous","C102W G174F",2
"lib2","SARS-CoV-2","CGGAAACATAAATGAT",1,16.15,6.49,-4.34,0.69,1.5,1.26,0.06,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","CGGAAACATCAATACG",5,23.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14V V77Q Y159K G196W",4
"lib2","SARS-CoV-2","CGGAAACCAAACCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S F17P D98Y",3
"lib2","SARS-CoV-2","CGGAAACCATATACAT",6,0.18,NA,NA,NA,NA,NA,NA,"stop","C49E C158*",2
"lib2","SARS-CoV-2","CGGAAACCCATCAGAC",10,163.02,9.61,-1.23,0.07,1.86,1.08,0,">1 nonsynonymous","S41F K56R F62M V173S",4
"lib2","SARS-CoV-2","CGGAAACCGAATGTTA",6,121.37,6,-4.84,0.58,1.78,1.14,0,">1 nonsynonymous","S29P C158K",2
"lib2","SARS-CoV-2","CGGAAACGACGACGTT",8,79.3,8.93,-1.91,0.07,1.88,1.1,0,">1 nonsynonymous","L5A S19R C61P",3
"lib2","SARS-CoV-2","CGGAAACGGATAAGTT",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N13V D98G N151A Y178P",5
"lib2","SARS-CoV-2","CGGAAACGTGTGGTAC",9,45.6,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L95T N107Y P149N",3
"lib2","SARS-CoV-2","CGGAAACTACAGGATG",4,84.15,10.81,-0.03,0.05,2.92,1.07,0,"1 nonsynonymous","F160M",1
"lib2","SARS-CoV-2","CGGAAAGCTGGTGCCT",7,75.82,10.97,0.14,0.07,2.87,1.14,0,">1 nonsynonymous","V37F P54A",2
"lib2","SARS-CoV-2","CGGAAAGTTAAAAAAT",1,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F V103N C150S",3
"lib2","SARS-CoV-2","CGGAAAGTTCATGCGT",1,28.24,10.67,-0.16,0.09,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGAAATAAGCTGCAG",5,4.21,NA,NA,NA,NA,NA,NA,"stop","V71* V77H G101E",3
"lib2","SARS-CoV-2","CGGAAATATGATGACA",9,91.48,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G86I F99L S184H",3
"lib2","SARS-CoV-2","CGGAAATTCGCAGCAA",5,16.73,7.15,-3.68,0.39,1.5,1.1,0.07,">1 nonsynonymous","S36R T170S P177K V182S K198M",5
"lib2","SARS-CoV-2","CGGAAATTGTGATGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","K87* L122P S129L Y143I S184A",5
"lib2","SARS-CoV-2","CGGAACAATATCTCAA",3,203.84,10.36,-0.48,0.04,2.93,1.06,0,">1 nonsynonymous","G9R L57M",2
"lib2","SARS-CoV-2","CGGAACAATCATCGAT",24,268.25,10.22,-0.62,0.04,2.66,1.02,0,">1 nonsynonymous","I2R D90I",2
"lib2","SARS-CoV-2","CGGAACAGAGAGATGC",4,0.36,NA,NA,NA,NA,NA,NA,"stop","I2P A33D Y119*",3
"lib2","SARS-CoV-2","CGGAACAGTTGGATAT",5,158.2,6.01,-4.82,0.37,2.13,1.15,0,">1 nonsynonymous","T100M S108I S129C G174S",4
"lib2","SARS-CoV-2","CGGAACATATTTGAGA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","L5G V77* I88T C158R",4
"lib2","SARS-CoV-2","CGGAACATGGCAGGGC",2,19.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83C Q84S D112W",3
"lib2","SARS-CoV-2","CGGAACATGTAGAATC",5,11.39,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T15A F47W V103F",3
"lib2","SARS-CoV-2","CGGAACATTATGAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","R25N Q84W Y91* S147T",4
"lib2","SARS-CoV-2","CGGAACCAATAGCATA",5,7.72,8.64,-2.2,0.12,2.11,1.17,0.01,">1 nonsynonymous","C6V A14R D90L",3
"lib2","SARS-CoV-2","CGGAACCAATATACGA",5,6.71,NA,NA,NA,NA,NA,NA,"stop","R16L R27P K87*",3
"lib2","SARS-CoV-2","CGGAACCAATTGACAA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S W23T N40D K87I R136L H189C",6
"lib2","SARS-CoV-2","CGGAACCCTTCACACT",2,6.95,NA,NA,NA,NA,NA,NA,"stop","T15* F47M C102I S129*",4
"lib2","SARS-CoV-2","CGGAACGCTATTCGGT",5,0.4,NA,NA,NA,NA,NA,NA,"stop","E76* I104* E141R T148W F160K",5
"lib2","SARS-CoV-2","CGGAACGGGATAACTA",3,0.62,NA,NA,NA,NA,NA,NA,"stop","Y66M G83C K87N T100N W106G N130* C150A Y178L",8
"lib2","SARS-CoV-2","CGGAACGGGCGTTGGA",10,274.6,10.85,0.01,0.06,2.92,1.09,0,">1 nonsynonymous","I2Q K48R",2
"lib2","SARS-CoV-2","CGGAACTACGGCATAG",1,19.31,10.85,0.01,0.12,2.81,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGGAACTAGGATAATT",7,71.17,10.79,-0.05,0.05,2.98,1.06,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","CGGAACTATTGCAATC",13,144.68,9.63,-1.21,0.06,2.32,1.04,0,">1 nonsynonymous","C31W S164F",2
"lib2","SARS-CoV-2","CGGAACTGAAACTTGC",7,93.56,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D98G I138N G172W",3
"lib2","SARS-CoV-2","CGGAACTGACCATAAT",5,42.97,6,-4.84,1.1,1.5,1.1,0,">1 nonsynonymous","G101P V115I G166E",3
"lib2","SARS-CoV-2","CGGAACTGGATGTAAC",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W T46R P96H N110C T140D V173A P177T",7
"lib2","SARS-CoV-2","CGGAACTTTTAAACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F D68K T148D E186V",4
"lib2","SARS-CoV-2","CGGAAGATGTTAAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99Y P149M K199I",3
"lib2","SARS-CoV-2","CGGAAGCGGAAATGCG",1,13.31,10.78,-0.06,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGAAGGCTTAATTCA",8,72.36,8.14,-2.7,0.13,2.22,1.02,0.01,">1 nonsynonymous","R73S K114W G155V",3
"lib2","SARS-CoV-2","CGGAAGGTAACCCAAT",1,0.75,NA,NA,NA,NA,NA,NA,"stop","E10* R179F A190E",3
"lib2","SARS-CoV-2","CGGAAGGTCAATCAGA",9,370.65,8.71,-2.12,0.04,2.79,1.09,0,">1 nonsynonymous","G146V T201W",2
"lib2","SARS-CoV-2","CGGAAGTATTAGAATT",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V K94Y R136T",3
"lib2","SARS-CoV-2","CGGAAGTCCTCACAAT",1,13.46,10.32,-0.51,0.23,2.68,1.01,0.02,">1 nonsynonymous","E10R A14T",2
"lib2","SARS-CoV-2","CGGAAGTCGTGACGTT",3,8.48,10.65,-0.19,0.07,3,1,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","CGGAAGTTAGCCTTTA",4,257.01,9.95,-0.88,0.06,2.81,1.03,0,">1 nonsynonymous","R25T F156P",2
"lib2","SARS-CoV-2","CGGAATAAAGGAAGCT",3,61.41,10.86,0.02,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGAATAATACAACAA",2,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47M Y91Q S164L",3
"lib2","SARS-CoV-2","CGGAATACCCCAACAT",1,6.4,6.78,-4.06,0.74,1.5,1.11,0.03,">1 nonsynonymous","L5N G86Y E154M",3
"lib2","SARS-CoV-2","CGGAATACGAGACAAA",11,134.97,10.52,-0.31,0.06,2.86,1.1,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CGGAATACGGTGTATT",3,72.42,10.44,-0.4,0.06,2.82,1.11,0,">1 nonsynonymous","V52M L122F T148I Q163L",4
"lib2","SARS-CoV-2","CGGAATACGTTATAAG",11,8.16,NA,NA,NA,NA,NA,NA,"stop","T15L S53* Q176K",3
"lib2","SARS-CoV-2","CGGAATACTGACACTG",5,67.18,10.09,-0.74,0.08,2.71,1.02,0,">1 nonsynonymous","A33L D59A P96N",3
"lib2","SARS-CoV-2","CGGAATACTGCTACAT",4,15.27,6,-4.84,2,1.5,1.12,0.03,"1 nonsynonymous","I80S",1
"lib2","SARS-CoV-2","CGGAATAGGAATATAA",1,18.35,10.48,-0.35,0.09,2.83,1.19,0,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","CGGAATATTAACCTGG",3,68.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19Y S29K Y119V",3
"lib2","SARS-CoV-2","CGGAATATTGAGAGAA",1,15.01,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y39H T85G G116A V181E",4
"lib2","SARS-CoV-2","CGGAATATTTAAGAGA",6,0.27,NA,NA,NA,NA,NA,NA,"stop","L5M S19F I80* S139A G152T",5
"lib2","SARS-CoV-2","CGGAATCAAGTAATGC",1,1.25,NA,NA,NA,NA,NA,NA,"stop","P96T C102R G166*",3
"lib2","SARS-CoV-2","CGGAATCAGCTTCTGG",1,7.78,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","S43F V103L E141L T148M",4
"lib2","SARS-CoV-2","CGGAATCGTATAGTAA",15,166.72,8.66,-2.17,0.06,2.94,1.1,0,">1 nonsynonymous","N1S C6N K87I Y119N",4
"lib2","SARS-CoV-2","CGGAATGAAGAAAACC",9,90.04,10.59,-0.25,0.04,2.9,1.12,0,">1 nonsynonymous","T140D P149I F160N P197L",4
"lib2","SARS-CoV-2","CGGAATGGCTAAACAT",5,100.35,8.69,-2.15,0.08,1.57,1.09,0,"1 nonsynonymous","W23E",1
"lib2","SARS-CoV-2","CGGAATGTAGCCAATA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","Y121W Y175D S184*",3
"lib2","SARS-CoV-2","CGGAATGTATTAAACT",2,24.01,10.05,-0.79,0.14,2.59,1.12,0.01,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","CGGAATTAGTCCAAAA",7,73.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82C I142L",2
"lib2","SARS-CoV-2","CGGAATTATGAGTTTA",7,73.05,8.8,-2.03,0.09,2.19,1.1,0,">1 nonsynonymous","S41I V52A T63M Q163E",4
"lib2","SARS-CoV-2","CGGACAAACGACTAAG",3,8.8,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","P7L G116W R127A N157Q",4
"lib2","SARS-CoV-2","CGGACAAACTGAGTAC",6,28.7,6.56,-4.28,0.59,1.5,1.13,0.04,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","CGGACAAAGAATATGG",6,82.46,10.15,-0.69,0.03,2.9,1.1,0,">1 nonsynonymous","S43I N118Q S164Q",3
"lib2","SARS-CoV-2","CGGACAAATCAAACCA",1,30.03,10.3,-0.53,0.05,2.96,1.06,0,">1 nonsynonymous","Y119S G166N",2
"lib2","SARS-CoV-2","CGGACAACACACCAAT",1,2.05,NA,NA,NA,NA,NA,NA,"stop","A42* Y91G",2
"lib2","SARS-CoV-2","CGGACAAGGCGATAGG",2,22,10.26,-0.58,0.11,2.65,1.01,0.01,">1 nonsynonymous","L95V F99L",2
"lib2","SARS-CoV-2","CGGACAAGGGATAACT",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26P C61M P82T L95P Q176L",5
"lib2","SARS-CoV-2","CGGACAAGTATCATAC",6,32.26,9.86,-0.98,0.16,1.84,1.17,0.01,">1 nonsynonymous","V103T Y123S",2
"lib2","SARS-CoV-2","CGGACAATAAATGACA",2,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Q A190E",2
"lib2","SARS-CoV-2","CGGACACAATAAGAGA",3,85.74,9.66,-1.18,0.08,2.33,1.02,0,">1 nonsynonymous","Y35V R136F",2
"lib2","SARS-CoV-2","CGGACACCATAGAGTG",4,56.31,9.23,-1.6,0.07,2.77,1.09,0,">1 nonsynonymous","P96T K114V F156H",3
"lib2","SARS-CoV-2","CGGACACGTTACCCGC",1,0,NA,NA,NA,NA,NA,NA,"stop","T63I G86* G117V K132Y C150W V173Y",6
"lib2","SARS-CoV-2","CGGACAGAATTACCCA",2,17.28,9.28,-1.56,0.33,2.13,1.15,0.04,">1 nonsynonymous","V103M Y121I P197L",3
"lib2","SARS-CoV-2","CGGACAGGAACATTGA",3,18.04,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","R25K L95S K128Q",3
"lib2","SARS-CoV-2","CGGACAGGTTAGCCTT",1,42.37,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L38C D90G E141S F167W P197V",5
"lib2","SARS-CoV-2","CGGACATCAAACCAAA",4,32.2,10.79,-0.05,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGACATTAATTCAAG",4,97.85,10.18,-0.65,0.07,2.69,1.03,0,">1 nonsynonymous","L95V F99L",2
"lib2","SARS-CoV-2","CGGACATTTGCTCCGA",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132I P149L G155H Q176K",4
"lib2","SARS-CoV-2","CGGACCAAAACCCGAA",4,24.85,6.9,-3.93,0.42,1.5,1.11,0.03,">1 nonsynonymous","S41Q S53E F99C H189C",4
"lib2","SARS-CoV-2","CGGACCAATATTAGTA",2,102.21,10.2,-0.63,0.05,2.9,1.07,0,"1 nonsynonymous","G152P",1
"lib2","SARS-CoV-2","CGGACCACATCTTACC",12,138.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44R G83Y R179C",3
"lib2","SARS-CoV-2","CGGACCATAGATTGGC",3,76.13,9.37,-1.47,0.06,2.87,1.09,0,">1 nonsynonymous","V37N N118T T148F",3
"lib2","SARS-CoV-2","CGGACCATGGCATCAT",3,3.66,NA,NA,NA,NA,NA,NA,"stop","R25* P96S L122V P149I",4
"lib2","SARS-CoV-2","CGGACCCAAATAATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D A89Y V153N",3
"lib2","SARS-CoV-2","CGGACCGTCGGCCAAT",2,84.94,6,-4.84,2,3,1.15,0,">1 nonsynonymous","P149L F160S Q176F",3
"lib2","SARS-CoV-2","CGGACCTGAGTTCAGG",2,52.55,10.03,-0.8,0.07,2.86,1.12,0,">1 nonsynonymous","A33Y N40S K56S Q176R",4
"lib2","SARS-CoV-2","CGGACGATCCAAAAAC",4,9.92,NA,NA,NA,NA,NA,NA,"stop","Y123E Y143*",2
"lib2","SARS-CoV-2","CGGACGCATGCCTGAA",8,0.97,NA,NA,NA,NA,NA,NA,"stop","P7L Y50* N92L S184V T201*",5
"lib2","SARS-CoV-2","CGGACGCCACACTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13Y A42T K56* W106S S113P T140A N151H",7
"lib2","SARS-CoV-2","CGGACGGATACTTTTG",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V C61L L162W",3
"lib2","SARS-CoV-2","CGGACGGGCACGCCTA",10,92.36,8.59,-2.24,0.09,1.81,1.03,0,">1 nonsynonymous","F44N R136M P149L",3
"lib2","SARS-CoV-2","CGGACGTACAGTACCA",3,18.9,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G9L I72S C150M",3
"lib2","SARS-CoV-2","CGGACTAATAACTCAA",3,12.04,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","S41I C150H",2
"lib2","SARS-CoV-2","CGGACTAATGGACAAA",10,97.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10A A33Q Y39W K56P Y165N P197V",6
"lib2","SARS-CoV-2","CGGACTACGGGCCAAA",8,65.26,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25L A33I S36C G51Y L60V G86K D112V K128I",8
"lib2","SARS-CoV-2","CGGACTAGATTTACCT",3,114.85,10.77,-0.07,0.04,2.94,1.08,0,"1 nonsynonymous","T85Q",1
"lib2","SARS-CoV-2","CGGACTATGGGCAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","G117C N130*",2
"lib2","SARS-CoV-2","CGGACTATTAATAGTG",11,145.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N64M G83N R127S G146S Y165A",5
"lib2","SARS-CoV-2","CGGACTCAAGAAGTCC",3,63.11,9.34,-1.49,0.07,2.1,1.04,0,">1 nonsynonymous","C61H G83V N107P",3
"lib2","SARS-CoV-2","CGGACTCATCATAATG",2,8.64,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","N1E D59I F70R N92D",4
"lib2","SARS-CoV-2","CGGACTCTGACAAGAG",7,1.07,NA,NA,NA,NA,NA,NA,"stop","K26* P96Q",2
"lib2","SARS-CoV-2","CGGACTGATCGTAGTC",1,52.51,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N1D F12L S69T Y91N E141C F156L",6
"lib2","SARS-CoV-2","CGGACTGCAAATTTAG",6,41.55,6.65,-4.18,0.4,1.5,1.09,0.02,">1 nonsynonymous","F12Y S45R P54R T63R P133H V173L",6
"lib2","SARS-CoV-2","CGGACTGCTGTCCCTG",5,32.69,8.94,-1.9,0.13,1.66,1.15,0.01,"1 nonsynonymous","V182S",1
"lib2","SARS-CoV-2","CGGACTTCAACATAAA",2,71.41,10.69,-0.15,0.04,2.98,1.03,0,">1 nonsynonymous","S43T N120V",2
"lib2","SARS-CoV-2","CGGACTTGACCAGTCC",4,4.02,NA,NA,NA,NA,NA,NA,"stop","C6D Y50N D59* L122T T170G",5
"lib2","SARS-CoV-2","CGGACTTGGACCACCG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14* T55S S69G K94A",4
"lib2","SARS-CoV-2","CGGACTTTTAGTAATA",19,4.72,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib2","SARS-CoV-2","CGGAGAAAAGAACAGG",5,9.42,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5R G101L N107Y N120Q",4
"lib2","SARS-CoV-2","CGGAGAACCAATGTAT",4,86.75,6,-4.84,2,3,1.21,0,">1 nonsynonymous","G9R Y93F D98P Y165T",4
"lib2","SARS-CoV-2","CGGAGAACCTAGATCA",2,33.64,9.58,-1.25,0.12,1.82,1.02,0.01,">1 nonsynonymous","A81T D90H",2
"lib2","SARS-CoV-2","CGGAGAACGACACAAG",2,31.68,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V37R G86K L95D Y119G",4
"lib2","SARS-CoV-2","CGGAGAACTGGCTTAA",7,27.88,6.07,-4.76,0.87,1.59,1.19,0.02,">1 nonsynonymous","S41A R179E",2
"lib2","SARS-CoV-2","CGGAGAAGACGCTATT",14,93.46,10.8,-0.03,0.05,2.92,1.09,0,">1 nonsynonymous","L111K T201K",2
"lib2","SARS-CoV-2","CGGAGAATTTATCGGA",5,64.07,10.76,-0.08,0.04,2.87,1.14,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","CGGAGACACAAAAATA",7,25.18,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","F12L R27I D68N G83A I88T L122R I138G N151D",8
"lib2","SARS-CoV-2","CGGAGACAGGGCCCCG",5,32.07,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T85C R124L C195F",3
"lib2","SARS-CoV-2","CGGAGACGCTAACCAT",6,284.5,10.18,-0.66,0.03,2.82,1,0,">1 nonsynonymous","V37C D98W",2
"lib2","SARS-CoV-2","CGGAGACTTTACATTT",12,110.11,6,-4.84,0.95,1.5,1.16,0.01,">1 nonsynonymous","G101C L125P",2
"lib2","SARS-CoV-2","CGGAGAGCTATAAATA",9,536.2,10.51,-0.32,0.03,2.95,1.04,0,">1 nonsynonymous","R27S N40R K114W",3
"lib2","SARS-CoV-2","CGGAGATAGCACTAAA",1,28.42,10,-0.83,0.11,2.42,1.07,0.01,">1 nonsynonymous","A81Y T100V",2
"lib2","SARS-CoV-2","CGGAGATGCCATGTTG",11,118.01,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44P G86L P149G",3
"lib2","SARS-CoV-2","CGGAGATTAAAGGAGG",5,37.57,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F62M A105P S113K P149S",4
"lib2","SARS-CoV-2","CGGAGCAAATTACCAA",5,53.59,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F12V R73G A81T E141G C158A",5
"lib2","SARS-CoV-2","CGGAGCAACCTGTGCA",7,103.24,10,-0.84,0.04,2.91,1.07,0,">1 nonsynonymous","T3A N118D",2
"lib2","SARS-CoV-2","CGGAGCAATTATATAT",5,88.43,10.54,-0.29,0.04,2.87,1.07,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","CGGAGCACAAGTTGAT",3,27.79,8.25,-2.59,0.19,1.97,1.08,0.01,">1 nonsynonymous","A18M Y143T",2
"lib2","SARS-CoV-2","CGGAGCCAACAACATA",1,11.65,8.28,-2.56,0.15,2.03,1,0.02,">1 nonsynonymous","P54C A145L P149L",3
"lib2","SARS-CoV-2","CGGAGCCTAGCCAAGC",2,30.49,6.03,-4.81,1.06,1.5,1.23,0.03,">1 nonsynonymous","D68T V71A V181A H189D",4
"lib2","SARS-CoV-2","CGGAGCCTCTTACTGG",4,0,NA,NA,NA,NA,NA,NA,"stop","I2L A81* T100* V173F V180R E186T",6
"lib2","SARS-CoV-2","CGGAGCGCGCCCCTTG",3,43.89,8.42,-2.41,0.13,2.67,1.05,0.01,">1 nonsynonymous","T100H L125K N130L",3
"lib2","SARS-CoV-2","CGGAGCTAGAAACTAA",6,89.91,10.56,-0.28,0.05,2.94,1.05,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","CGGAGCTGTGCCATAA",2,6.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33M L122P",2
"lib2","SARS-CoV-2","CGGAGCTTGATATCCA",1,11.22,10.74,-0.1,0.1,2.96,1.09,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","CGGAGGACATTTTCTG",3,30.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50I N64P Q79L",3
"lib2","SARS-CoV-2","CGGAGGATATGTTTAC",4,1.58,NA,NA,NA,NA,NA,NA,"stop","P7N T55* C61Y W106G",4
"lib2","SARS-CoV-2","CGGAGGCAGACCGATC",7,37.38,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","N4I E10Y P82F F99D P133S",5
"lib2","SARS-CoV-2","CGGAGGCATAATAAAA",4,120.62,10.7,-0.13,0.05,2.94,1.03,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","CGGAGGCGGTCATGAT",13,143.39,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16M R179N",2
"lib2","SARS-CoV-2","CGGAGTACGCGCATTG",1,21.62,10.77,-0.06,0.07,2.8,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGAGTAGCTCGCCGT",1,10,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","P7I A33I C61K I88S",4
"lib2","SARS-CoV-2","CGGAGTATTGAAGCGA",15,306.14,10.58,-0.26,0.04,2.86,1.11,0,">1 nonsynonymous","E154K G174T P197S",3
"lib2","SARS-CoV-2","CGGAGTCAAACAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","R25S T140*",2
"lib2","SARS-CoV-2","CGGAGTTTCAAATGCA",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A42G V65I A89L",4
"lib2","SARS-CoV-2","CGGATAAAATAAGTGC",3,0.3,NA,NA,NA,NA,NA,NA,"stop","C6L D34Q N64* T85D Y143P",5
"lib2","SARS-CoV-2","CGGATAAAATACCGTA",4,67.68,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C102F E141D C150S Y175C",4
"lib2","SARS-CoV-2","CGGATAAAGACATGAG",2,11.03,9.34,-1.5,0.23,1.75,1.3,0.01,">1 nonsynonymous","W106V E141S",2
"lib2","SARS-CoV-2","CGGATAAATATAACTA",2,50.71,10.34,-0.49,0.06,2.95,1,0,">1 nonsynonymous","Q84V D98G N110V",3
"lib2","SARS-CoV-2","CGGATAAATATGACAT",6,77.94,10.83,0,0.05,2.94,1.05,0,"1 nonsynonymous","R16E",1
"lib2","SARS-CoV-2","CGGATAAATATTACAG",12,106.75,10.58,-0.26,0.04,2.91,1.06,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","CGGATAATTCAGTTGC",2,86.08,10.88,0.05,0.05,2.91,1.11,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","CGGATACAGGGATAAA",6,71.59,10,-0.84,0.09,2.28,1.06,0,">1 nonsynonymous","P54K F99V",2
"lib2","SARS-CoV-2","CGGATACATTGAGATT",4,23.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4R E10Y F99D N109T P161H Y175D K198N",7
"lib2","SARS-CoV-2","CGGATACGACATGTTA",5,44.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23R S43E F134I N151H V173S",5
"lib2","SARS-CoV-2","CGGATACTACGATGGA",1,24.22,10.85,0.01,0.1,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGATAGAAAGCACAG",1,38.95,9.21,-1.63,0.02,2.95,1.08,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","CGGATAGTATTTATGC",3,9.29,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34P F99I N107D Q176H",4
"lib2","SARS-CoV-2","CGGATATGAAAAAAAT",3,9.97,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F8S S36Y D112W",3
"lib2","SARS-CoV-2","CGGATATGGACAGACA",4,95.2,7.8,-3.03,0.19,1.5,1.12,0.01,"1 nonsynonymous","Q176F",1
"lib2","SARS-CoV-2","CGGATATTATACTAGG",2,35.06,10.97,0.13,0.07,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGATATTCGTGACAG",3,1.22,NA,NA,NA,NA,NA,NA,"stop","R27L L38S Q84D K94* G101K I142S",6
"lib2","SARS-CoV-2","CGGATCAAGAACTAGT",6,0.17,NA,NA,NA,NA,NA,NA,"stop","S129* D137F Q168I",3
"lib2","SARS-CoV-2","CGGATCACCAAAATTA",17,164.72,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48N D59L Y66A N118E G172N",5
"lib2","SARS-CoV-2","CGGATCACGGATAACC",2,15.69,7.05,-3.79,0.4,1.6,1.06,0.07,">1 nonsynonymous","T63W I104G R179S",3
"lib2","SARS-CoV-2","CGGATCATAGACAAAG",9,25.89,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S53F K94P",2
"lib2","SARS-CoV-2","CGGATCATCTTATCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","P7* L162S T201M",3
"lib2","SARS-CoV-2","CGGATCCTAGTCCGTT",2,23.88,10.82,-0.01,0.07,2.92,1.1,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","CGGATCCTATTTTCTG",6,80.36,10.24,-0.6,0.08,2.42,1,0,">1 nonsynonymous","T3V R16G D98P",3
"lib2","SARS-CoV-2","CGGATCCTGAGCAAGG",5,70.1,9.92,-0.92,0.1,2.39,1.07,0,">1 nonsynonymous","C61L E135V",2
"lib2","SARS-CoV-2","CGGATCCTGGTATTAA",6,20.66,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61L G83F D97S I104A P161Q G196I",6
"lib2","SARS-CoV-2","CGGATCGCCAATATAC",5,2.38,NA,NA,NA,NA,NA,NA,"stop","V71* L122T D137M",3
"lib2","SARS-CoV-2","CGGATCGCTTGAGGAC",5,10.78,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C6S D90P P169M",3
"lib2","SARS-CoV-2","CGGATCTTGCGCAATT",12,133.37,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8L Y39W G83P K114L P133V",5
"lib2","SARS-CoV-2","CGGATCTTTTTCGAGT",7,0.58,NA,NA,NA,NA,NA,NA,"stop","E10* L125G F167Y L187N C195N",5
"lib2","SARS-CoV-2","CGGATGAACTCAAATT",9,225.33,10.86,0.02,0.06,2.88,1.11,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","CGGATGAATCCCCGAT",12,138.94,6,-4.84,1.49,1.5,1.26,0.03,">1 nonsynonymous","Y50S A89L R124S",3
"lib2","SARS-CoV-2","CGGATGCCGGTTGACG",3,40.74,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S45F N58Y G117L P161N",4
"lib2","SARS-CoV-2","CGGATGTCGTTAATCT",10,52.32,6.04,-4.79,1.01,1.5,1.18,0.02,">1 nonsynonymous","Y50S A105F K132S",3
"lib2","SARS-CoV-2","CGGATGTGAGGTAGAA",7,31.02,6,-4.84,1.2,1.5,1.1,0.01,">1 nonsynonymous","Y35R I142N C158G",3
"lib2","SARS-CoV-2","CGGATGTTAAGATAAC",4,54.79,10.2,-0.63,0.09,2.54,1.08,0,">1 nonsynonymous","F62R N107P Y123F",3
"lib2","SARS-CoV-2","CGGATTAAACTAAGTA",5,68.34,10.05,-0.79,0.1,2.52,1,0,">1 nonsynonymous","S45E I88M",2
"lib2","SARS-CoV-2","CGGATTAAGAACTATC",1,19.09,8.08,-2.76,0.13,2.51,1.01,0.01,">1 nonsynonymous","N58D G146P",2
"lib2","SARS-CoV-2","CGGATTAATGCTCTTC",3,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V F99Q",2
"lib2","SARS-CoV-2","CGGATTAATGTAGACT",2,1.07,NA,NA,NA,NA,NA,NA,"stop","Y66S T85K Y119* T148P",4
"lib2","SARS-CoV-2","CGGATTACATAATGAT",5,105.73,9.94,-0.89,0.08,2.52,1.04,0,">1 nonsynonymous","A18S G83T E141H",3
"lib2","SARS-CoV-2","CGGATTAGGTAACGAG",10,138.79,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12I V37A Y93A A105L",4
"lib2","SARS-CoV-2","CGGATTATTGGTATTC",2,13.86,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2T R73V Y123N G155R",4
"lib2","SARS-CoV-2","CGGATTCATAAATACA",1,20.48,10.75,-0.09,0.04,3,1,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","CGGATTCCGATAAAGA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G D34P G51D D90L P133L Q168L",6
"lib2","SARS-CoV-2","CGGATTGAAGGGTTAT",2,33.63,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36V D68A G86K N107S",4
"lib2","SARS-CoV-2","CGGATTGAATATTAAG",7,0.49,NA,NA,NA,NA,NA,NA,"stop","L122* K132T K199I",3
"lib2","SARS-CoV-2","CGGATTGAGATTTATA",4,35.28,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A81Y Y123E R179S",3
"lib2","SARS-CoV-2","CGGATTGAGTCCTTAT",1,3.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","CGGATTGCAAGCCTAA",1,39.25,10.76,-0.08,0.04,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGATTTATTGGTAAA",9,125.91,9.22,-1.62,0.04,2.93,1.09,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","CGGATTTATTTAATTA",2,52.73,10.84,0.01,0.07,2.87,1.06,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","CGGATTTCCGGGATTG",10,0.3,NA,NA,NA,NA,NA,NA,"stop","Y50* A89R D98H F156L",4
"lib2","SARS-CoV-2","CGGCAAAAATAACGAG",1,15.49,10.88,0.04,0.09,2.88,1.15,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","CGGCAAAAGGGAACTG",1,1.24,NA,NA,NA,NA,NA,NA,"stop","C6A K87G D112*",3
"lib2","SARS-CoV-2","CGGCAAAATGTTCAAC",4,98.13,6,-4.84,1.38,1.5,1.11,0.01,">1 nonsynonymous","C150R N157L Q163T",3
"lib2","SARS-CoV-2","CGGCAAACAAAGCCGT",1,17.33,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S41L I88D K132M Q176R",4
"lib2","SARS-CoV-2","CGGCAAACCTAGAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37M K114R L122R T148*",4
"lib2","SARS-CoV-2","CGGCAAACGTTCTATC",8,74.98,10.83,-0.01,0.08,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCAAACTTTAAACT",12,201.78,9.51,-1.33,0.05,2.87,1.1,0,">1 nonsynonymous","G146R T201L",2
"lib2","SARS-CoV-2","CGGCAAATTTGCGTTA",4,52.3,9.78,-1.05,0.11,2.51,1.09,0,">1 nonsynonymous","F8V K26R L60C",3
"lib2","SARS-CoV-2","CGGCAACCAACATAAC",2,102.41,7.99,-2.84,0.16,1.5,1.09,0.01,">1 nonsynonymous","E141L Q176R",2
"lib2","SARS-CoV-2","CGGCAAGAGCCGTAGA",1,37.7,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","P7I D34N N58S N92V D137F C150N",6
"lib2","SARS-CoV-2","CGGCAAGGTATTAACA",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43N C61L A105D P149R",4
"lib2","SARS-CoV-2","CGGCAATAAACTCAAT",11,422.06,6.63,-4.21,0.4,1.5,1.15,0.02,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","CGGCAATAGCTCCTAT",3,0.71,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib2","SARS-CoV-2","CGGCAATCCCCATTAT",3,51.9,10.84,0,0.04,2.93,1.04,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","CGGCAATGGATCATAT",2,70.69,10.27,-0.57,0.03,2.9,1.1,0,">1 nonsynonymous","F44Y K87G",2
"lib2","SARS-CoV-2","CGGCACAAATATAGCC",2,69.16,10.36,-0.48,0.05,2.94,1.06,0,"1 nonsynonymous","G155E",1
"lib2","SARS-CoV-2","CGGCACAAGGAACCTT",2,7.76,10.28,-0.56,0.27,1.85,1.02,0.04,">1 nonsynonymous","S41G A81F",2
"lib2","SARS-CoV-2","CGGCACATGTTAATAA",4,54,6,-4.84,2,3,1.25,0,">1 nonsynonymous","F17C D90H S129F",3
"lib2","SARS-CoV-2","CGGCACCCAGGTGCGA",1,90.24,10.8,-0.03,0.04,2.91,1.11,0,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","CGGCACCGCGCATCCA",1,28.86,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N30K K94N W106V N157F",4
"lib2","SARS-CoV-2","CGGCACCTCTATCAAA",3,36.66,10.87,0.03,0.06,2.95,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGCACGTACAAGACT",12,2.74,NA,NA,NA,NA,NA,NA,"stop","P82V K128* V173S",3
"lib2","SARS-CoV-2","CGGCACGTTATATATA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","C61Y S129* F160L",3
"lib2","SARS-CoV-2","CGGCACTACAATATGA",12,242.56,10.83,0,0.05,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCACTGAGTAACAG",3,60.92,10.78,-0.06,0.04,2.93,1.08,0,">1 nonsynonymous","G146S T201S",2
"lib2","SARS-CoV-2","CGGCACTTGCGGTTTT",4,82.27,10.72,-0.11,0.04,2.95,1.07,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","CGGCAGAGAAGGACTC",5,115.26,10.78,-0.06,0.04,2.95,1.04,0,">1 nonsynonymous","L5V P149N",2
"lib2","SARS-CoV-2","CGGCAGAGACTCAACA",5,1.29,NA,NA,NA,NA,NA,NA,"stop","K56N A67F D90P S113*",4
"lib2","SARS-CoV-2","CGGCAGCAACCCTCGA",8,57.11,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N92A L122K D137P R179M T201Y",5
"lib2","SARS-CoV-2","CGGCAGCTACTCGCAG",8,103.2,7.4,-3.43,0.12,1.69,1.07,0,">1 nonsynonymous","G83R C158N",2
"lib2","SARS-CoV-2","CGGCAGGTAAAACGCA",3,29.81,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","I28W R73M P177V",3
"lib2","SARS-CoV-2","CGGCATAACCTCGGTG",8,111.2,10.75,-0.09,0.04,2.95,1.07,0,">1 nonsynonymous","L5V K132L",2
"lib2","SARS-CoV-2","CGGCATATATCTAGAT",1,11.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16V N92V Y119R",3
"lib2","SARS-CoV-2","CGGCATATTAAAAGGG",7,314.46,10.66,-0.18,0.02,2.88,1.07,0,">1 nonsynonymous","K26Q S164C",2
"lib2","SARS-CoV-2","CGGCATCTCCTAAAAC",3,118.77,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F8V I88G Q176P",3
"lib2","SARS-CoV-2","CGGCATCTTTTGTTGA",3,24.08,10.13,-0.71,0.08,2.87,1.08,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","CGGCATGTCACATTCG",6,193.24,9.97,-0.87,0.04,2.9,1.01,0,">1 nonsynonymous","T3Y F47L K87N",3
"lib2","SARS-CoV-2","CGGCATGTCTACTTAT",5,90.24,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L60Q T85Q L95A T100V R136D A145G R179S",7
"lib2","SARS-CoV-2","CGGCATTACCGCCATT",11,119.76,6,-4.84,2,3,1.16,0,"1 nonsynonymous","R124C",1
"lib2","SARS-CoV-2","CGGCATTATTTGACAA",6,3.03,NA,NA,NA,NA,NA,NA,"stop","I2L E76* W106R L125R I142P",5
"lib2","SARS-CoV-2","CGGCATTCAGACGATC",13,354.33,10.8,-0.04,0.03,2.97,1.04,0,">1 nonsynonymous","S43T G83F",2
"lib2","SARS-CoV-2","CGGCATTCTGAAAGAA",4,75.29,10.87,0.03,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCATTGCACGGAGG",2,49.06,10.84,0.01,0.04,2.93,1.07,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","CGGCCAAACGTATACG",4,2.64,NA,NA,NA,NA,NA,NA,"stop","S43K G83I Y121* P149S Q168R",5
"lib2","SARS-CoV-2","CGGCCAACATATATAT",10,259.02,10.63,-0.21,0.02,2.89,1.06,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","CGGCCAATTGAATATA",1,24.63,9.64,-1.2,0.15,1.86,1.07,0.01,">1 nonsynonymous","R16T P82R",2
"lib2","SARS-CoV-2","CGGCCACCCCCTCGAA",9,108.1,6,-4.84,1.27,1.5,1.28,0.02,">1 nonsynonymous","C6V F12R Y35E V103I S184T",5
"lib2","SARS-CoV-2","CGGCCAGACCGACGAC",1,35.56,7.06,-3.78,0.37,1.5,1.13,0.02,">1 nonsynonymous","F17G S36I R136L",3
"lib2","SARS-CoV-2","CGGCCATGTACCAATA",2,39.7,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F8L V20M G74Q D90K",4
"lib2","SARS-CoV-2","CGGCCATTATGCAACA",4,80.5,10.69,-0.14,0.02,2.93,1.09,0,">1 nonsynonymous","S41A C61R",2
"lib2","SARS-CoV-2","CGGCCCAAATTAAAAG",3,38.03,10.21,-0.62,0.1,2.47,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCCCCAATTAATTG",5,65.62,10.85,0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCCCGTCAGTTGAA",5,0.27,NA,NA,NA,NA,NA,NA,"stop","N118T V153* P169R",3
"lib2","SARS-CoV-2","CGGCCCGTCGGTTCTA",4,38.13,6.51,-4.33,0.44,1.5,1.21,0.02,">1 nonsynonymous","S29G A89K A190S K198S",4
"lib2","SARS-CoV-2","CGGCCCTATCCACCAA",1,52.66,10.65,-0.19,0.04,2.93,1.08,0,">1 nonsynonymous","A22K V37R",2
"lib2","SARS-CoV-2","CGGCCGAATAAATATC",1,110.13,10.73,-0.1,0.04,2.89,1.06,0,">1 nonsynonymous","S41N Q84E",2
"lib2","SARS-CoV-2","CGGCCGCATGTGTGTG",8,120.04,10.79,-0.04,0.04,2.94,1.08,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","CGGCCGGCGCTGCCTT",6,22.18,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","C6T P82L G152L G172V",4
"lib2","SARS-CoV-2","CGGCCTACGCGTTAAT",2,55.01,10.8,-0.04,0.06,2.85,1.16,0,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","CGGCCTAGTTACAAAT",1,8.45,8.9,-1.94,0.37,1.76,1.01,0.06,">1 nonsynonymous","Y91S P96S",2
"lib2","SARS-CoV-2","CGGCGAATTTTTTGAT",4,56.66,9.59,-1.25,0.13,1.8,1.11,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","CGGCGACCTCGTAAAA",1,6.34,8.79,-2.04,0.32,2.24,1.5,0.03,">1 nonsynonymous","C61R A105I V173D A192L",4
"lib2","SARS-CoV-2","CGGCGACGAAGTAAAT",9,9.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41F V71N V115T S164K K198Q",5
"lib2","SARS-CoV-2","CGGCGAGCAAATTAGA",15,132.01,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","W23V G155C",2
"lib2","SARS-CoV-2","CGGCGAGTAGAAATGT",1,21.2,9.98,-0.86,0.17,2.06,1.29,0.01,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CGGCGATAAACTGATA",18,317,10.87,0.03,0.04,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGCGCCAGGGTGTAC",8,109,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86I D98L G116L P149A N157V T201K",6
"lib2","SARS-CoV-2","CGGCGGACAGTCTGAA",7,87.15,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C31I C158L V173R",3
"lib2","SARS-CoV-2","CGGCGGCTCTAACGAT",1,16.68,10.53,-0.31,0.11,2.92,1,0,">1 nonsynonymous","N4P N30A",2
"lib2","SARS-CoV-2","CGGCGTAACAGTAATT",6,119.89,10.29,-0.55,0.02,2.94,1.02,0,">1 nonsynonymous","D59M Y121L",2
"lib2","SARS-CoV-2","CGGCGTACGAACATCA",2,28.87,6,-4.84,1.69,3,1.14,0.01,">1 nonsynonymous","G9R F156R L162Y Q176I",4
"lib2","SARS-CoV-2","CGGCGTAGTACGAGCA",1,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","CGGCGTCCAAACCAAA",7,137.68,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","G117Q I138K Q176W",3
"lib2","SARS-CoV-2","CGGCGTGCTAGATAAA",4,64.91,8.14,-2.69,0.36,1.5,1.07,0.05,">1 nonsynonymous","P96F F156S K199M",3
"lib2","SARS-CoV-2","CGGCTAAAAATATACA",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L R124P N130S",3
"lib2","SARS-CoV-2","CGGCTAAATCAAGAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L95* Y121D",2
"lib2","SARS-CoV-2","CGGCTAAGATATTAAA",7,5.25,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y39Q P96Q V182E",3
"lib2","SARS-CoV-2","CGGCTAAGTCTACCTG",3,22.83,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N4G A14L S45L T55P C61L C150E",6
"lib2","SARS-CoV-2","CGGCTACAGCAGCATG",1,19.94,10.35,-0.48,0.07,2.99,1.02,0.01,">1 nonsynonymous","L5V C61T K87S",3
"lib2","SARS-CoV-2","CGGCTACCCAAGCCAA",7,59.54,9.82,-1.02,0.06,2.13,1.08,0,">1 nonsynonymous","D90N L122E T148L Y178L",4
"lib2","SARS-CoV-2","CGGCTACGGGTGGCTG",6,82.98,9.71,-1.12,0.1,2.28,1.12,0,">1 nonsynonymous","L57R P149L T201Q",3
"lib2","SARS-CoV-2","CGGCTATGAGACGTCC",4,37.28,8.95,-1.89,0.06,2.84,1.16,0,">1 nonsynonymous","G9A Y119E T148E",3
"lib2","SARS-CoV-2","CGGCTATTGACTATGC",6,10.26,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S53I C61M C102D G166Y",4
"lib2","SARS-CoV-2","CGGCTCAACATCGTTA",7,86.26,6.33,-4.51,0.53,1.5,1.24,0.02,">1 nonsynonymous","T55I D68M S139A V173M",4
"lib2","SARS-CoV-2","CGGCTCAGAGGATAAA",10,46.03,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V103G P169R K198P",3
"lib2","SARS-CoV-2","CGGCTCCAACTTCAGT",2,37.85,10.64,-0.19,0.04,2.97,1.06,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","CGGCTCCAAGTAGAGA",6,21.73,10.63,-0.2,0.04,2.96,1.05,0,"1 nonsynonymous","T46R",1
"lib2","SARS-CoV-2","CGGCTCCCAAATCTTA",11,148.64,10.75,-0.08,0.03,2.98,1.04,0,">1 nonsynonymous","T63N L122V N151D T201Q",4
"lib2","SARS-CoV-2","CGGCTCCGATTTCTGC",9,48.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F17L S41G L57R",3
"lib2","SARS-CoV-2","CGGCTCCGGTCACACT",2,6.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14E K94L V103G S200W",4
"lib2","SARS-CoV-2","CGGCTCTTTACGCCAA",8,103.29,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C6N N24R K87S D97Y Y119M Y165F",6
"lib2","SARS-CoV-2","CGGCTGAACAAAGTAA",2,12.39,10.85,0.01,0.07,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCTGAACCGATCAT",12,89.14,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","E10S C61Y E76K A81L K94E G101P W106S Y121K E154R",9
"lib2","SARS-CoV-2","CGGCTGAAGCAAGACA",1,15.85,10.95,0.12,0.1,2.85,1.15,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","CGGCTGACCATTGTCC",2,75.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38S F167Y N171K",3
"lib2","SARS-CoV-2","CGGCTGCCAACAAGTA",9,56.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y93Q R136H",2
"lib2","SARS-CoV-2","CGGCTGGAACCAGTAA",5,77.64,10.7,-0.14,0.05,2.94,1.08,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","CGGCTGGACGACACGG",9,157.34,9.75,-1.09,0.03,2.87,1.03,0,">1 nonsynonymous","P96D G166A",2
"lib2","SARS-CoV-2","CGGCTGGTCCCACATA",2,24.86,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","N30W F99I I142N",3
"lib2","SARS-CoV-2","CGGCTGTATCAAAATG",15,107.88,10.78,-0.06,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCTGTCAATCAAAC",6,158.27,10.83,-0.01,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGCTTACATGATGGT",5,25.13,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A14W N107I K128S S200M",4
"lib2","SARS-CoV-2","CGGCTTCACTCATAAT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T S43L Y93H",3
"lib2","SARS-CoV-2","CGGCTTCTAGGCGTTA",5,2.64,NA,NA,NA,NA,NA,NA,"stop","K48* D97Q V103M",3
"lib2","SARS-CoV-2","CGGCTTGAGACCAACT",9,22.58,6,-4.84,1.09,1.83,1.21,0.01,">1 nonsynonymous","S113I P161L N171S V182R T201E",5
"lib2","SARS-CoV-2","CGGCTTGAGGGTACAC",15,153.85,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N58A D112G Y121F",3
"lib2","SARS-CoV-2","CGGCTTGGAAATTCTA",2,35.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28T C49F N151L G196K",4
"lib2","SARS-CoV-2","CGGCTTGTTATGACAT",1,1.35,NA,NA,NA,NA,NA,NA,"stop","D68M K94* N157S",3
"lib2","SARS-CoV-2","CGGCTTTAATCCCAAA",1,0.64,NA,NA,NA,NA,NA,NA,"stop","L60* V65S K87W V103R N118C F156H",6
"lib2","SARS-CoV-2","CGGCTTTAATTAAGGT",4,98.48,9.49,-1.35,0.04,2.91,1.07,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","CGGCTTTATACAACAT",2,51.1,10.76,-0.08,0.06,2.87,1.14,0,">1 nonsynonymous","S41E T85S",2
"lib2","SARS-CoV-2","CGGCTTTGTAGTTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S19W P82* V181T",3
"lib2","SARS-CoV-2","CGGGAAAACTAATCAG",1,14.09,10.76,-0.08,0.06,2.92,1.12,0,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","CGGGAAAATACGTAAT",14,143.2,8.41,-2.43,0.16,2.31,1.06,0.01,">1 nonsynonymous","T55H G117L V173P",3
"lib2","SARS-CoV-2","CGGGAAACAACAGGAC",1,1.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y143E",1
"lib2","SARS-CoV-2","CGGGAAACATAAATAA",14,3.6,NA,NA,NA,NA,NA,NA,"stop","P82Y D90R Y119* F160P",4
"lib2","SARS-CoV-2","CGGGAAACTACAATGC",3,49.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I28A K48V F62L R179L L188I",5
"lib2","SARS-CoV-2","CGGGAAACTGACTAAC",9,123.43,10.55,-0.28,0.04,2.94,1.07,0,">1 nonsynonymous","T3Q S29Q N58E",3
"lib2","SARS-CoV-2","CGGGAAACTTTCGAAC",7,0,NA,NA,NA,NA,NA,NA,"stop","S36A G196*",2
"lib2","SARS-CoV-2","CGGGAAAGCTTTCAAC",2,62.46,10.49,-0.35,0.03,2.94,1,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","CGGGAAAGGAACTCAA",2,11.49,10.65,-0.19,0.11,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGAAAGTGCAAGTT",9,116.24,10.49,-0.35,0.04,2.94,1.02,0,">1 nonsynonymous","I2N E10V A42D D97L",4
"lib2","SARS-CoV-2","CGGGAAATAAAACCCT",8,74.84,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38R R136N E186P",3
"lib2","SARS-CoV-2","CGGGAAATATAATCAG",1,42.55,10.82,-0.01,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGAAATCCGTTGAG",11,274.66,7.85,-2.99,0.09,1.5,1.15,0,">1 nonsynonymous","I28Q F126T",2
"lib2","SARS-CoV-2","CGGGAACCTTAAGCAA",6,95.56,10.66,-0.18,0.04,3,1.03,0,">1 nonsynonymous","L60T S129R",2
"lib2","SARS-CoV-2","CGGGAACGCTAAAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37L D75R P96Y V103S F156H",6
"lib2","SARS-CoV-2","CGGGAACTAAATAGAA",10,1.11,NA,NA,NA,NA,NA,NA,"stop","F99V W106M L187S K199*",4
"lib2","SARS-CoV-2","CGGGAACTTAATCCTT",5,78.6,6,-4.84,2,3,1.2,0,">1 nonsynonymous","L38E Q84S G146Y P169H A190S",5
"lib2","SARS-CoV-2","CGGGAAGAAACTGAAA",4,55.31,10.27,-0.56,0.09,2.58,1.06,0,">1 nonsynonymous","A89G D97L L111I H189N",4
"lib2","SARS-CoV-2","CGGGAAGAGACTCCTT",6,75.81,9.46,-1.37,0.15,1.88,1.07,0.01,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","CGGGAAGTCTCATACA",3,34.47,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G74R Q84L P96T",3
"lib2","SARS-CoV-2","CGGGAAGTTATATGTG",2,34.79,8.16,-2.68,0.17,2.53,1,0.01,">1 nonsynonymous","C31L G166R",2
"lib2","SARS-CoV-2","CGGGAATAACAGCCCT",2,54.24,10.02,-0.81,0.06,2.87,1.08,0,">1 nonsynonymous","D34C T55G L95V N120D",4
"lib2","SARS-CoV-2","CGGGAATAACCAAGAT",4,50.99,10.77,-0.06,0.07,2.9,1.12,0,"1 nonsynonymous","S147A",1
"lib2","SARS-CoV-2","CGGGAATGCACATTGC",1,44.78,10.46,-0.38,0.07,2.99,1,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","CGGGACAATAATCACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3H L60* P82S R179M",4
"lib2","SARS-CoV-2","CGGGACAATAGCTAGG",3,18.69,8.99,-1.85,0.24,1.5,1.08,0.03,">1 nonsynonymous","N4Y Y39S D90Y D98Q",4
"lib2","SARS-CoV-2","CGGGACAATGACCAAT",11,80.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V52T L60R G101I I104H",4
"lib2","SARS-CoV-2","CGGGACATCCCTAGAG",4,85.38,10.63,-0.21,0.04,2.89,1.1,0,">1 nonsynonymous","D59Y S129F",2
"lib2","SARS-CoV-2","CGGGACCAAAACGTAA",8,55.38,10.84,0,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGACCAAGCCTGTA",4,78.52,10.81,-0.03,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGGACCATGAGTGTA",1,25,10.84,0,0.04,2.9,1.11,0,">1 nonsynonymous","D97I T201P",2
"lib2","SARS-CoV-2","CGGGACCTAGTGCGCG",2,21.43,9.88,-0.96,0.09,2.28,1,0,">1 nonsynonymous","N30H P82V",2
"lib2","SARS-CoV-2","CGGGACGAAATCGCCT",3,40.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F47L G101D L122V",3
"lib2","SARS-CoV-2","CGGGACGATTCTTCGC",2,33.99,10.33,-0.5,0.06,2.76,1.06,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","CGGGACGTTACAGCCG",7,6.26,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15L I80M",2
"lib2","SARS-CoV-2","CGGGACTAACAACTAC",1,16.08,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V103W R136S",2
"lib2","SARS-CoV-2","CGGGACTACTCCTAGT",4,37.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44L I88T D97S",3
"lib2","SARS-CoV-2","CGGGACTCAAGAACAA",1,1.37,NA,NA,NA,NA,NA,NA,"stop","E10D L60* T201L",3
"lib2","SARS-CoV-2","CGGGACTCTCATCGAG",9,89.95,8.59,-2.25,0.11,1.83,1.06,0,">1 nonsynonymous","F17S N118A K199S",3
"lib2","SARS-CoV-2","CGGGACTGGCGCATAA",10,4.79,NA,NA,NA,NA,NA,NA,"stop","A42Y D75* G152S V173S",4
"lib2","SARS-CoV-2","CGGGAGAAAGAACAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","N1M Y35A C49R T55F F62T Y121V S139*",7
"lib2","SARS-CoV-2","CGGGAGATCGAGGTGC",2,45.3,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I2M F167S",2
"lib2","SARS-CoV-2","CGGGAGATTCCATCAG",1,14.52,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17M C61E Q84S F99P",4
"lib2","SARS-CoV-2","CGGGAGCCACCTCGAC",7,56.87,10.59,-0.25,0.05,2.98,1.04,0,">1 nonsynonymous","I104V E141G",2
"lib2","SARS-CoV-2","CGGGAGGAAACAAAAC",8,0.22,NA,NA,NA,NA,NA,NA,"stop","A42* C61S D68M G152L",4
"lib2","SARS-CoV-2","CGGGAGTAATATCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138S T170F",2
"lib2","SARS-CoV-2","CGGGAGTACCAGAACG",4,31.78,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A105W C150R K198G",3
"lib2","SARS-CoV-2","CGGGAGTGCCTGCTGT",14,8.87,8.67,-2.17,0.42,2.35,1.07,0.06,">1 nonsynonymous","R25C F62I I88L",3
"lib2","SARS-CoV-2","CGGGATAAAAGAATAT",2,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S V37F I142K",3
"lib2","SARS-CoV-2","CGGGATAAAGAGAATA",7,0.64,NA,NA,NA,NA,NA,NA,"stop","L5Q W23* G51I K128L",4
"lib2","SARS-CoV-2","CGGGATACAAGATAAT",3,20.62,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","L60A Q84Y E141C G152I T201R",5
"lib2","SARS-CoV-2","CGGGATACTCAAACCT",2,25.74,9.39,-1.45,0.07,2.85,1.14,0,">1 nonsynonymous","F156L G174K",2
"lib2","SARS-CoV-2","CGGGATATCATCGAAT",10,13.55,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","D34T G83H T85S V103C N120A G152C",6
"lib2","SARS-CoV-2","CGGGATATGATCATCC",11,0.2,NA,NA,NA,NA,NA,NA,"stop","A67C V173*",2
"lib2","SARS-CoV-2","CGGGATCACAACAATT",1,6.84,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","G9C I28P T46L P149M",4
"lib2","SARS-CoV-2","CGGGATCATGATCACG",18,238.49,10.27,-0.56,0.03,2.93,1.04,0,">1 nonsynonymous","L5R K48E G116L K199I",4
"lib2","SARS-CoV-2","CGGGATCTTGCTTCCC",1,32.97,10.47,-0.37,0.07,2.89,1.08,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CGGGATGACGGGCAAG",12,125.62,9.34,-1.5,0.1,2.27,1.09,0,">1 nonsynonymous","E10C F126A P149S S164R",4
"lib2","SARS-CoV-2","CGGGATGACGGTATTT",5,19.89,6.02,-4.82,1.22,1.5,1.14,0.03,">1 nonsynonymous","K48S Q84F S139F G155E",4
"lib2","SARS-CoV-2","CGGGATGATTTCCAAG",1,8.23,10.66,-0.18,0.13,2.97,1,0,"1 nonsynonymous","L122Q",1
"lib2","SARS-CoV-2","CGGGATGCAAATGATG",3,43.48,10.75,-0.08,0.05,2.99,1.04,0,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","CGGGATGTAATTTTCC",4,2.89,NA,NA,NA,NA,NA,NA,"stop","F8* D59P",2
"lib2","SARS-CoV-2","CGGGCAAAAAAGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* N110P L122Y",3
"lib2","SARS-CoV-2","CGGGCAAAGCTGGTTC",4,20.83,9.26,-1.57,0.14,1.85,1.2,0.01,">1 nonsynonymous","R25S K56H P149I",3
"lib2","SARS-CoV-2","CGGGCAAGTCGGCTTC",13,191.81,7.22,-3.62,0.12,1.77,1.12,0,">1 nonsynonymous","K132Q C158N",2
"lib2","SARS-CoV-2","CGGGCACAAGGAGTGA",8,5.61,NA,NA,NA,NA,NA,NA,"stop","Y35* V103H F185Y",3
"lib2","SARS-CoV-2","CGGGCACCAAGCTTAA",3,50.52,10.91,0.08,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGCATAAGATCTCT",3,47.48,8.86,-1.98,0.13,1.9,1.21,0.01,">1 nonsynonymous","A22R Y35H Q144H",3
"lib2","SARS-CoV-2","CGGGCATGAATAGAAT",14,151.35,10.47,-0.36,0.05,2.95,1.05,0,">1 nonsynonymous","T55C D98H V173L",3
"lib2","SARS-CoV-2","CGGGCCGAGCTAATAA",5,140.19,10.42,-0.41,0.03,2.9,1.04,0,">1 nonsynonymous","N1S L162M",2
"lib2","SARS-CoV-2","CGGGCGACAGTCTGTA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","Y91* Y159V",2
"lib2","SARS-CoV-2","CGGGCGACTGCCAGTA",11,100.09,10.77,-0.06,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGCGGCGAGGCTCC",3,38.46,10.81,-0.02,0.06,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGGCGTAAATCATCA",5,63.85,6.74,-4.1,0.23,1.5,1.13,0.01,">1 nonsynonymous","N110I C150T",2
"lib2","SARS-CoV-2","CGGGCTAATTTCTAGC",2,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S I28L P96T L122V F134S",5
"lib2","SARS-CoV-2","CGGGCTAGAATGTCAG",1,8.6,10.79,-0.05,0.16,2.92,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGGGCTAGACAACGCG",3,5.46,NA,NA,NA,NA,NA,NA,"stop","N1M V77* F134G T148N",4
"lib2","SARS-CoV-2","CGGGCTCAGTCTGCAC",1,37.15,9.33,-1.51,0.12,2.45,1.01,0.01,">1 nonsynonymous","T15L Y143M",2
"lib2","SARS-CoV-2","CGGGCTCTGATTGGGA",6,132.1,10.69,-0.15,0.03,2.96,1.03,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","CGGGGAAACCAGTTAT",3,50.09,9.46,-1.37,0.14,2,1.08,0.01,">1 nonsynonymous","C61F P96R",2
"lib2","SARS-CoV-2","CGGGGAACAACTTCTT",20,312.15,10.8,-0.04,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGGAACACGTTATG",5,5.22,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","CGGGGAACAGCTACTC",5,6.81,10.64,-0.19,0.13,2.99,1.02,0,">1 nonsynonymous","N40R N64V",2
"lib2","SARS-CoV-2","CGGGGACATAGTCGAC",3,26.86,10.79,-0.04,0.06,2.97,1.05,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","CGGGGACCGTTGAGCT",6,24.6,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","A14V A67T D112H R124S",4
"lib2","SARS-CoV-2","CGGGGACGTGCTCGCA",3,41.12,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D112Q S129H E141G T201E",4
"lib2","SARS-CoV-2","CGGGGACGTTCTTATA",5,23.62,8.16,-2.68,0.17,2.31,1.05,0.01,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","CGGGGACTGCGGTCAA",6,40.62,6.11,-4.73,0.84,1.5,1.18,0.02,">1 nonsynonymous","I2P I28T I142L F185C",4
"lib2","SARS-CoV-2","CGGGGCAAGCGAAGCC",2,47.08,10.81,-0.03,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGGCAGGACACCCC",4,59.34,9.5,-1.34,0.05,2.92,1.07,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","CGGGGCAGGACGTAAA",3,16.27,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","P82W N130Y I138L",3
"lib2","SARS-CoV-2","CGGGGCGAAATGCTGG",5,24.35,9.35,-1.49,0.24,1.5,1.11,0.03,">1 nonsynonymous","D90N W106E",2
"lib2","SARS-CoV-2","CGGGGCGAACCTAATG",16,6.24,NA,NA,NA,NA,NA,NA,"stop","I2R S41* I80V",3
"lib2","SARS-CoV-2","CGGGGGCTTATATCAA",3,83.52,10.77,-0.06,0.08,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGGGGAAATAAGAA",6,68.84,9.87,-0.97,0.06,2.57,1.04,0,">1 nonsynonymous","W106F G152T",2
"lib2","SARS-CoV-2","CGGGGTATAATCGTGC",3,16.37,10.04,-0.79,0.14,2.15,1,0.01,">1 nonsynonymous","A14F T148V",2
"lib2","SARS-CoV-2","CGGGGTCTAGCACACT",3,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35M K128M S147Y Q176K",4
"lib2","SARS-CoV-2","CGGGGTTAACAATAAC",4,21.16,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","W23L N64S V71G K87T F99I R136S",6
"lib2","SARS-CoV-2","CGGGTAACTCTAATTG",5,46.51,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P7Y F44T G83T Y175C",4
"lib2","SARS-CoV-2","CGGGTACCTTTCAAAG",7,1.22,NA,NA,NA,NA,NA,NA,"stop","V71M I104* D112E",3
"lib2","SARS-CoV-2","CGGGTAGCATTAGAAA",8,54.74,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N1R K48F N92L R136C",4
"lib2","SARS-CoV-2","CGGGTCAAGCACTAGT",3,33.11,8.09,-2.75,0.19,1.8,1.1,0.01,">1 nonsynonymous","T140M Y165S",2
"lib2","SARS-CoV-2","CGGGTCAGACCCGGCC",2,37.7,6.71,-4.13,0.43,1.5,1.07,0.03,">1 nonsynonymous","N1T F12P G146F S184V",4
"lib2","SARS-CoV-2","CGGGTCATTGATTTCC",1,25.97,10.63,-0.21,0.06,2.96,1.02,0,">1 nonsynonymous","G51D H189R P197M",3
"lib2","SARS-CoV-2","CGGGTCCCCCTAGAAT",5,78.29,10.05,-0.79,0.06,2.7,1.03,0,">1 nonsynonymous","C6Y L162I",2
"lib2","SARS-CoV-2","CGGGTCCTTAAACTCG",9,0.5,NA,NA,NA,NA,NA,NA,"stop","T140K F156*",2
"lib2","SARS-CoV-2","CGGGTCGAAATGAACA",5,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F I88R Y119F P149M F185Q",5
"lib2","SARS-CoV-2","CGGGTCTGCTAATCTC",11,123.25,8.27,-2.57,0.11,2.32,1.13,0,">1 nonsynonymous","G117R N151P",2
"lib2","SARS-CoV-2","CGGGTCTGTAGCACAG",10,217.17,8.99,-1.84,0.05,2.17,1.07,0,">1 nonsynonymous","R27M F47L Y143M",3
"lib2","SARS-CoV-2","CGGGTCTTAAAAACAA",5,26.37,6.44,-4.4,0.85,1.5,1.28,0.06,">1 nonsynonymous","P96M L122V C158L",3
"lib2","SARS-CoV-2","CGGGTCTTAACAATAT",1,18.11,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","L38V F44T A67Y G146L S184R",5
"lib2","SARS-CoV-2","CGGGTCTTAATTTTAC",1,9.04,10.86,0.02,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGTGACCAGCACCT",11,348.27,8.59,-2.25,0.13,1.5,1.09,0.01,">1 nonsynonymous","G9R D68M",2
"lib2","SARS-CoV-2","CGGGTGATTCCGGGGA",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y T55P A89C V153I",4
"lib2","SARS-CoV-2","CGGGTGCAACACCCTT",9,2.42,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib2","SARS-CoV-2","CGGGTGCACTGCCATA",7,139.25,10.8,-0.04,0.04,2.94,1.07,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","CGGGTGTGCCAATGGA",15,11.51,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","T3N A33N V71R G83L T100R V181N",6
"lib2","SARS-CoV-2","CGGGTGTTGGCAAGTT",1,23.06,10.76,-0.07,0.06,2.86,1.16,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","CGGGTTAAAATCTTGC",20,222.43,6.11,-4.73,0.67,1.5,1.16,0.01,">1 nonsynonymous","I2L G9K S43R L60Y Q84T Y119S R127L T201A",8
"lib2","SARS-CoV-2","CGGGTTACTGCAATGC",2,65.51,10.8,-0.04,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGTTAGACAGGCAA",2,34.5,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S45T C49H S53V L125Y S139L L188N",6
"lib2","SARS-CoV-2","CGGGTTATAATAGCAC",4,25.09,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V37C A67D R78P D98G F126N G174M T201I",7
"lib2","SARS-CoV-2","CGGGTTATGTGAACTA",17,114.3,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G9M L60I N92D F99L",4
"lib2","SARS-CoV-2","CGGGTTCAATAGCTGT",4,29.43,9.32,-1.51,0.34,1.5,1.05,0.05,">1 nonsynonymous","A14F G146R",2
"lib2","SARS-CoV-2","CGGGTTCAGATTCAGA",6,50.61,8.94,-1.89,0.05,2.9,1.1,0,">1 nonsynonymous","P54A Y119C F160S",3
"lib2","SARS-CoV-2","CGGGTTCTATGTTCAG",5,99.93,10.84,0.01,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGGTTGTGATAGTAT",2,16.58,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N92R G146D Q168H",3
"lib2","SARS-CoV-2","CGGGTTTACGGAATGT",4,0.97,NA,NA,NA,NA,NA,NA,"stop","G83* Y178R",2
"lib2","SARS-CoV-2","CGGGTTTATTCACAAA",15,53.19,7.8,-3.04,0.37,1.5,1.1,0.06,">1 nonsynonymous","N1Y P7S L95F",3
"lib2","SARS-CoV-2","CGGGTTTTCCTAAACT",5,3.25,NA,NA,NA,NA,NA,NA,"stop","F17* D90F Y119L",3
"lib2","SARS-CoV-2","CGGTAAAAAGTCGGGC",5,34.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N92Q W106I G174D",3
"lib2","SARS-CoV-2","CGGTAAAACAGTTTAA",2,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S F99S V173H",3
"lib2","SARS-CoV-2","CGGTAAAATAATGTAA",2,65.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K26G F44W A89C P177R",4
"lib2","SARS-CoV-2","CGGTAAACACGAACAC",3,24.79,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","C31R D68E C158F",3
"lib2","SARS-CoV-2","CGGTAAACGAACCCCA",7,196.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y119A S139M Y178I",3
"lib2","SARS-CoV-2","CGGTAAACGTATCTCA",3,1.46,NA,NA,NA,NA,NA,NA,"stop","Y119* I138* Y175G",3
"lib2","SARS-CoV-2","CGGTAAACGTGAAGAC",15,100.81,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T85L Y93V",2
"lib2","SARS-CoV-2","CGGTAAACGTTTGCAC",1,114.04,7.57,-3.26,0.15,1.97,1.1,0.01,">1 nonsynonymous","T15V T55I Y119S T170E",4
"lib2","SARS-CoV-2","CGGTAAAGTCAAACGG",8,10.35,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","E10F P54G C61M D90A F185A",5
"lib2","SARS-CoV-2","CGGTAAATACAAAAGG",13,60.99,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50C F99S",2
"lib2","SARS-CoV-2","CGGTAACATATGAAAC",3,16.37,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","P7M P54S A105S L131S",4
"lib2","SARS-CoV-2","CGGTAACCTACCTAGT",2,18,6,-4.84,2,1.5,1.41,0.06,">1 nonsynonymous","W106P N171T",2
"lib2","SARS-CoV-2","CGGTAACGTACATAGA",1,13.6,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y119N N120S S129D C158T",4
"lib2","SARS-CoV-2","CGGTAACTATATTATA",5,49.01,10.62,-0.21,0.03,2.87,1.12,0,">1 nonsynonymous","L5Y Y91F",2
"lib2","SARS-CoV-2","CGGTAAGAGTCAAAGG",9,51.63,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A14F V77K K128G",3
"lib2","SARS-CoV-2","CGGTAAGCTCGATAGG",5,0.02,NA,NA,NA,NA,NA,NA,"stop","P7* T201D",2
"lib2","SARS-CoV-2","CGGTAAGTCCTGATTC",1,5.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77A K87T Y93R D137Q",4
"lib2","SARS-CoV-2","CGGTAATAATGGTCAA",10,84.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4Y R25L Y165R",3
"lib2","SARS-CoV-2","CGGTAATCAGTCGCGA",5,90.06,6.36,-4.47,0.57,1.5,1.12,0.02,">1 nonsynonymous","D112S G152A",2
"lib2","SARS-CoV-2","CGGTAATCCAGTATCG",4,0.6,NA,NA,NA,NA,NA,NA,"stop","N1* F156H",2
"lib2","SARS-CoV-2","CGGTAATTAACTAATT",7,25.74,10.3,-0.53,0.09,2.68,1.03,0,">1 nonsynonymous","E135S E186H",2
"lib2","SARS-CoV-2","CGGTACAAAAACAGAC",4,40.98,10.66,-0.18,0.04,3,1,0,"1 nonsynonymous","F62Q",1
"lib2","SARS-CoV-2","CGGTACAATGGCACTT",3,16.74,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G9P N92R G172D",3
"lib2","SARS-CoV-2","CGGTACACCTAACCAT",4,62.74,10.83,-0.01,0.07,2.99,1.04,0,"1 nonsynonymous","Q163H",1
"lib2","SARS-CoV-2","CGGTACACGTTGGTAG",9,23.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3G I28E S45K F62T I80W D98V K132S",7
"lib2","SARS-CoV-2","CGGTACAGAAGTTAAT",8,33.15,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","K94D F99L G155W Y175R",4
"lib2","SARS-CoV-2","CGGTACAGGGTCTAAA",9,38.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18C S45F W106Y T201V",4
"lib2","SARS-CoV-2","CGGTACAGGTAAAAAG",1,11.05,6.1,-4.74,1.29,1.5,1.05,0.06,">1 nonsynonymous","L5Q D98S D112P N120I S139F",5
"lib2","SARS-CoV-2","CGGTACATTACGCCTC",4,46.82,10.62,-0.21,0.05,2.92,1.08,0,">1 nonsynonymous","N64W T148N",2
"lib2","SARS-CoV-2","CGGTACCATCCTGTCC",7,116.49,10.78,-0.05,0.04,2.96,1.04,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","CGGTACCCGATTGCCA",10,0.64,NA,NA,NA,NA,NA,NA,"stop","V52S G83V I88* Y121S N151F",5
"lib2","SARS-CoV-2","CGGTACCGAAGGACTA",1,12.92,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","R16I V65S F99V",3
"lib2","SARS-CoV-2","CGGTACCGCGGACAAC",1,22.4,10.63,-0.21,0.09,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGTACGGATTACCAA",11,118.38,10.5,-0.33,0.07,2.85,1.15,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","CGGTACGTAATATAAC",9,159.98,10.75,-0.08,0.03,2.97,1.04,0,"1 nonsynonymous","V153S",1
"lib2","SARS-CoV-2","CGGTACGTCCAGACCC",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L N30V L60H W106L S147L T201D",6
"lib2","SARS-CoV-2","CGGTACGTGAAACTGT",7,108.1,10.73,-0.11,0.03,2.95,1.08,0,">1 nonsynonymous","F62I V115R T148N V153N",4
"lib2","SARS-CoV-2","CGGTACGTTCAGATAA",3,32.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T3L P96H F167L",3
"lib2","SARS-CoV-2","CGGTAGCTATCATCTA",12,154.74,10.83,0,0.04,2.96,1.05,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","CGGTAGCTTAGTAACC",5,28.5,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","W106G T170L",2
"lib2","SARS-CoV-2","CGGTATAAAGGTGTAC",12,204.95,10.76,-0.08,0.03,2.92,1.09,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","CGGTATAACCGCAGAT",1,12.02,10.79,-0.05,0.09,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGTATACCATAGCCA",6,3.72,NA,NA,NA,NA,NA,NA,"stop","C6K Y50M P96N N107C E135S G172*",6
"lib2","SARS-CoV-2","CGGTATACTTACAAGT",2,51.1,8.33,-2.51,0.12,1.96,1.15,0,">1 nonsynonymous","P133R N171E",2
"lib2","SARS-CoV-2","CGGTATACTTCGCTAG",11,172.3,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D90F S113A P177M A192T",4
"lib2","SARS-CoV-2","CGGTATAGCGCCACAG",12,46.46,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","L5H S19V D90P P149S",4
"lib2","SARS-CoV-2","CGGTATATATCCATCG",8,152.37,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","C158F T170S",2
"lib2","SARS-CoV-2","CGGTATATTAATGACA",6,17.04,8.82,-2.01,0.24,1.84,1.19,0.02,">1 nonsynonymous","S41Y P96C Y119V",3
"lib2","SARS-CoV-2","CGGTATATTTGTAGAT",5,44.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C102S E141R",2
"lib2","SARS-CoV-2","CGGTATCATCAGAGAA",3,15.08,6,-4.84,2,2.53,1.11,0.01,">1 nonsynonymous","C6E G51D V65A P96L S113Y T201S",6
"lib2","SARS-CoV-2","CGGTATCCCCATAAAA",1,9.29,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","CGGTATCGATAAAAAG",1,26.25,8.57,-2.27,0.08,2.33,1.13,0,">1 nonsynonymous","Y35T N107P G174K",3
"lib2","SARS-CoV-2","CGGTATGGATTGCATA",9,105,9.87,-0.96,0.1,2.33,1.08,0,">1 nonsynonymous","V115Y Y123T",2
"lib2","SARS-CoV-2","CGGTATGGTCCCGTTA",3,16.6,NA,NA,NA,NA,NA,0.21,"1 nonsynonymous","V181E",1
"lib2","SARS-CoV-2","CGGTATGTGCACAGAT",15,6.23,NA,NA,NA,NA,NA,NA,"stop","D59* G174I",2
"lib2","SARS-CoV-2","CGGTATTAACAACCGG",3,84.75,9.89,-0.95,0.08,2.39,1.01,0,"1 nonsynonymous","L38T",1
"lib2","SARS-CoV-2","CGGTATTACAGTTATG",4,69.48,9.88,-0.95,0.12,2.56,1.01,0,">1 nonsynonymous","K56W N107P",2
"lib2","SARS-CoV-2","CGGTATTCCAATGAAA",4,78.87,10.85,0.01,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGTATTTCACTTTAG",1,68.48,10.8,-0.03,0.06,2.85,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGTATTTCATTAGCT",12,53.98,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D59L Q79P Y91E L122M",4
"lib2","SARS-CoV-2","CGGTATTTGCGCAGTG",1,19.56,10.68,-0.15,0.08,2.91,1.1,0,"1 nonsynonymous","T148V",1
"lib2","SARS-CoV-2","CGGTATTTTCTGTACG",2,6.31,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D59E Y93R L122K",3
"lib2","SARS-CoV-2","CGGTCAAAAGAAAAGA",4,9.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N C49L F99D",3
"lib2","SARS-CoV-2","CGGTCAAAATATAATA",2,52.2,10.38,-0.46,0.03,2.94,1.07,0,">1 nonsynonymous","S43R K87P",2
"lib2","SARS-CoV-2","CGGTCAAATACTACCT",13,181.91,7.75,-3.09,0.09,2.17,1.06,0,"1 nonsynonymous","C158N",1
"lib2","SARS-CoV-2","CGGTCAAATCGCACTG",11,15.7,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","V11C S41H G51S T55F P96S L122G E135S",7
"lib2","SARS-CoV-2","CGGTCACTAGATAACA",8,161.56,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y121R Q176K",2
"lib2","SARS-CoV-2","CGGTCACTATATCTAG",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P I28M Y91F D97W P169W",5
"lib2","SARS-CoV-2","CGGTCAGAACCTAGCA",1,34.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y93T T148N",2
"lib2","SARS-CoV-2","CGGTCAGCACAAGACA",4,98.4,10.65,-0.19,0.06,2.93,1.03,0,">1 nonsynonymous","S41L L162I",2
"lib2","SARS-CoV-2","CGGTCAGGTATCATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R S41T F99I P197T",4
"lib2","SARS-CoV-2","CGGTCATAATGACACC",2,34.08,6,-4.84,2,1.71,1.11,0.01,">1 nonsynonymous","R27T D34A C158L",3
"lib2","SARS-CoV-2","CGGTCATATAGCGGAG",9,206.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K87W C150L E154A T170H T201S",5
"lib2","SARS-CoV-2","CGGTCATCCGTTGATG",5,26.74,7.96,-2.87,0.19,1.55,1.02,0.01,"1 nonsynonymous","S108F",1
"lib2","SARS-CoV-2","CGGTCATCTCTCTTCA",3,141.44,10.7,-0.14,0.04,2.95,1.06,0,">1 nonsynonymous","N120K E135A",2
"lib2","SARS-CoV-2","CGGTCATCTTTATGAC",7,1.19,NA,NA,NA,NA,NA,NA,"stop","F8T F17R L57F F62I A89* C102L G146P L162D V173L",9
"lib2","SARS-CoV-2","CGGTCATGGGTCGAGT",4,85.73,10.71,-0.13,0.04,2.97,1.04,0,">1 nonsynonymous","E141G T148L S200L",3
"lib2","SARS-CoV-2","CGGTCATTAAACTACT",2,65.18,10.35,-0.48,0.04,2.99,1.01,0,">1 nonsynonymous","N40G S129P",2
"lib2","SARS-CoV-2","CGGTCATTTTTGACCC",1,36.26,9.55,-1.29,0.12,2.44,1.11,0.01,">1 nonsynonymous","L60N G155I",2
"lib2","SARS-CoV-2","CGGTCCACGCTATCAG",6,15.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Q84W I88E",2
"lib2","SARS-CoV-2","CGGTCCAGATAAATTA",7,2.08,NA,NA,NA,NA,NA,NA,"stop","C49V K87S P96D F99* F126Y G172R",6
"lib2","SARS-CoV-2","CGGTCCCAGTCGTAAG",7,17.95,6.57,-4.26,0.61,1.5,1.14,0.04,">1 nonsynonymous","L57C N107I",2
"lib2","SARS-CoV-2","CGGTCCCCACTCAACA",2,21.12,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","F44T V52L F99N",3
"lib2","SARS-CoV-2","CGGTCCCGCATTGACT",1,28.29,10.56,-0.27,0.11,3,1.01,0.01,">1 nonsynonymous","P7T I28M",2
"lib2","SARS-CoV-2","CGGTCCCTTAGATGAA",5,12.39,6.83,-4.01,0.56,1.5,1.06,0.07,">1 nonsynonymous","F12R L60R D98G K128R",4
"lib2","SARS-CoV-2","CGGTCCTATTACCCAC",4,38.94,7.34,-3.5,0.27,1.5,1.14,0.02,">1 nonsynonymous","D97S V103A",2
"lib2","SARS-CoV-2","CGGTCCTTGCGATGGA",10,155.52,9.48,-1.35,0.06,1.94,1.11,0,">1 nonsynonymous","N64I D90G E141H",3
"lib2","SARS-CoV-2","CGGTCGAAAATTTACT",9,77.23,6,-4.84,2,2.57,1.23,0.01,">1 nonsynonymous","F44Q C61L K87T D112V P149S",5
"lib2","SARS-CoV-2","CGGTCTAGAGACTAAA",2,1.42,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CGGTCTCCCACAGTTA",3,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V A14Q T100R S139F",4
"lib2","SARS-CoV-2","CGGTCTCCCCAAACCC",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23C S43L T100P A105P S139T V153A S200G",7
"lib2","SARS-CoV-2","CGGTCTCGATTTAAAA",2,31.05,10.91,0.08,0.07,2.93,1.04,0,">1 nonsynonymous","N130P V194I",2
"lib2","SARS-CoV-2","CGGTCTCTAAGATCAG",5,42.22,9.68,-1.15,0.11,2.07,1.13,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","CGGTCTTAGGCAAGAA",3,70.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28P L38N",2
"lib2","SARS-CoV-2","CGGTGAAGGACACTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I88T D98R Y143* V153I Y178S",5
"lib2","SARS-CoV-2","CGGTGAATCTAATCGA",1,1.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137R",1
"lib2","SARS-CoV-2","CGGTGACATTCCACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61* Q84S A105H G155F",4
"lib2","SARS-CoV-2","CGGTGACCAGACTCAT",2,8.51,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F44L D97R A105P D137L",4
"lib2","SARS-CoV-2","CGGTGACGCCCCTAGA",3,87.7,9.96,-0.87,0.05,2.86,1,0,">1 nonsynonymous","C6L V173M",2
"lib2","SARS-CoV-2","CGGTGACTACAGTCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","T85G D98K Q176*",3
"lib2","SARS-CoV-2","CGGTGCAACAGACAAA",5,103.87,10.85,0.02,0.03,2.99,1.03,0,">1 nonsynonymous","Q168A A192R",2
"lib2","SARS-CoV-2","CGGTGCACCAAAACTT",9,38.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2S E76I V181N",3
"lib2","SARS-CoV-2","CGGTGCATACAATGCA",4,14.76,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N58L V103R N157L",3
"lib2","SARS-CoV-2","CGGTGCCTGTGGATAA",2,5.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81K Q84H L122R K128M",4
"lib2","SARS-CoV-2","CGGTGCGAAGACGATA",11,39.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V20L K94V G101A T201R",4
"lib2","SARS-CoV-2","CGGTGCGACCTAAATG",8,80.61,10.45,-0.38,0.05,2.88,1.1,0,">1 nonsynonymous","T15S Y39S E141F",3
"lib2","SARS-CoV-2","CGGTGCGATACTACAC",2,39.25,10.77,-0.07,0.03,2.9,1.12,0,"1 nonsynonymous","H189R",1
"lib2","SARS-CoV-2","CGGTGCTAAAATCCCA",2,95,10.72,-0.11,0.03,3,1,0,">1 nonsynonymous","F62I G152S",2
"lib2","SARS-CoV-2","CGGTGCTGGCGAAGGA",3,16.24,10.47,-0.37,0.1,2.85,1,0,">1 nonsynonymous","S41A P149T E154G T201W",4
"lib2","SARS-CoV-2","CGGTGGAGAATAAAGC",20,142.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8D V52D V77I Y178H",4
"lib2","SARS-CoV-2","CGGTGGCATATTTTAA",4,28.98,6.55,-4.29,0.23,2.43,1.09,0.01,">1 nonsynonymous","I138A G146R Q168S P169T",4
"lib2","SARS-CoV-2","CGGTGGGCAATTTTAC",3,40.77,9.06,-1.78,0.08,2.99,1.09,0,">1 nonsynonymous","G117V Q168H T201N",3
"lib2","SARS-CoV-2","CGGTGGTAGGGGCCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V S53L",2
"lib2","SARS-CoV-2","CGGTGTCAAAGACGAT",9,4.42,NA,NA,NA,NA,NA,NA,"stop","E76* Y178F",2
"lib2","SARS-CoV-2","CGGTGTGAAAGATAAA",4,28.76,8.41,-2.42,0.16,1.67,1.07,0.01,">1 nonsynonymous","A14C K26G K87N T201M",4
"lib2","SARS-CoV-2","CGGTGTGCGACTGCTA",6,18.72,6.34,-4.5,0.81,1.5,1.16,0.05,">1 nonsynonymous","A14L C49L T55D V103D S147L N151I G166S",7
"lib2","SARS-CoV-2","CGGTGTTAAACCCGCA",8,50.51,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I72V S139Y P177K",3
"lib2","SARS-CoV-2","CGGTGTTCTTATCTCC",6,30.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3F G83I K94A N151I",4
"lib2","SARS-CoV-2","CGGTGTTGAGTATGAA",14,178.54,10.05,-0.78,0.06,2.67,1.06,0,">1 nonsynonymous","N30T I104F Q144P",3
"lib2","SARS-CoV-2","CGGTTAAACAGAGGAG",4,44.58,7.28,-3.56,0.15,1.87,1.06,0.01,"1 nonsynonymous","C150T",1
"lib2","SARS-CoV-2","CGGTTAAGAAGATAAT",4,86.85,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D34C D112E F126S V181A T201Y",5
"lib2","SARS-CoV-2","CGGTTAAGACGCTGTA",12,5.24,NA,NA,NA,NA,NA,NA,"stop","Y35H L60* D98L N107F Y119L",5
"lib2","SARS-CoV-2","CGGTTAAGTCGTCACT",2,18.32,10.55,-0.28,0.04,3,1.05,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","CGGTTAATTAGACACC",3,16.78,6,-4.84,2,1.5,1.06,0.05,">1 nonsynonymous","K87Q D112G K128V G155W F167L T201I",6
"lib2","SARS-CoV-2","CGGTTACAACCTTTGA",2,67.74,9,-1.84,0.06,2.98,1.06,0,">1 nonsynonymous","I88V Y119V",2
"lib2","SARS-CoV-2","CGGTTACCAGCACCGC",4,54.17,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L5F R124L",2
"lib2","SARS-CoV-2","CGGTTACCAGTGACTT",2,50.14,10.74,-0.1,0.02,2.96,1.05,0,">1 nonsynonymous","S43H L60D",2
"lib2","SARS-CoV-2","CGGTTACTAAGCGATC",14,47.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W106G P161F",2
"lib2","SARS-CoV-2","CGGTTACTACACGTCA",2,41.62,10.86,0.03,0.05,2.87,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CGGTTACTGCGCACTA",5,69.71,10.73,-0.11,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGGTTAGATTTGAAGG",2,20.28,11.01,0.17,0.05,3,1.03,0,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","CGGTTATAAACATTTC",6,85.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28P P149R",2
"lib2","SARS-CoV-2","CGGTTATAAACTTCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15K C61Q P96* T170N T201C",5
"lib2","SARS-CoV-2","CGGTTATTCTGAACGT",4,74.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16W V77E F134A",3
"lib2","SARS-CoV-2","CGGTTCAAATGTGTTG",1,6.47,6,-4.84,1.9,1.5,1.27,0.03,"1 nonsynonymous","G101Y",1
"lib2","SARS-CoV-2","CGGTTCCCAAATATCA",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V Y39S Y143C",3
"lib2","SARS-CoV-2","CGGTTCCCGTTGGTCA",2,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70D L95R L188M",3
"lib2","SARS-CoV-2","CGGTTCTCATTGGTTA",15,118.08,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9V S45F Q84Y D98V Y123S",5
"lib2","SARS-CoV-2","CGGTTCTGACCACGAA",10,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A T85F N120D",3
"lib2","SARS-CoV-2","CGGTTCTTTTGGTGAA",7,84.17,9.65,-1.18,0.09,1.94,1.07,0,">1 nonsynonymous","S45H W106K",2
"lib2","SARS-CoV-2","CGGTTGACATGACTGC",2,58.74,10.3,-0.54,0.07,2.96,1.05,0,">1 nonsynonymous","D34N S184G",2
"lib2","SARS-CoV-2","CGGTTGATTTCTTACC",15,156.51,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6R L57T Y175N",3
"lib2","SARS-CoV-2","CGGTTGCACTTATCCG",5,18.05,8.99,-1.85,0.37,1.5,1.18,0.07,">1 nonsynonymous","A14P K56I Q79E T201H",4
"lib2","SARS-CoV-2","CGGTTGCCGCTGTTTA",13,64.44,6.32,-4.51,0.66,1.5,1.32,0.03,">1 nonsynonymous","N1I C61T S69K",3
"lib2","SARS-CoV-2","CGGTTGGCGAAAAATA",1,5.39,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","L5Q Y21G C102F E154C S184K",5
"lib2","SARS-CoV-2","CGGTTGTACCAAAAAT",8,39.29,6.06,-4.78,1.4,1.5,1.18,0.04,">1 nonsynonymous","F44R P54L P96S E141R G152T",5
"lib2","SARS-CoV-2","CGGTTGTATTCTAAAG",5,44.85,10.55,-0.29,0.05,2.82,1.19,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","CGGTTTAAACTTAAAC",1,6.42,9.73,-1.1,0.09,2.87,1,0,">1 nonsynonymous","F62Q P169A",2
"lib2","SARS-CoV-2","CGGTTTCGAGGCCGAC",3,1.29,NA,NA,NA,NA,NA,NA,"stop","A14K Y50* L57Q K94* A105* P169G",6
"lib2","SARS-CoV-2","CGGTTTGAATTCCTTC",3,64.14,10.9,0.06,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAAAAAAAAATTTG",2,11.59,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","L5K T15L Y39H K48D D90S P96N E141K",7
"lib2","SARS-CoV-2","CGTAAAAAAACTTACC",6,94.08,10.79,-0.05,0.06,2.97,1.07,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","CGTAAAAAACGCGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40L S53* Y91F N107L",4
"lib2","SARS-CoV-2","CGTAAAAAACTTAGGA",6,73.93,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","V77E V115K L122P",3
"lib2","SARS-CoV-2","CGTAAAAAATGATGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85P I142N S200*",3
"lib2","SARS-CoV-2","CGTAAAAACCATTAAT",8,145.36,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G9R G86L P96R Y175M",4
"lib2","SARS-CoV-2","CGTAAAAAGATAACAC",5,14.36,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N120Y Y165N P169C",3
"lib2","SARS-CoV-2","CGTAAAAAGCCCACAC",1,24.41,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","L5R C102H A190R",3
"lib2","SARS-CoV-2","CGTAAAAATTGCGAGA",7,72.91,10.62,-0.21,0.04,2.99,1.03,0,">1 nonsynonymous","S43R G116T",2
"lib2","SARS-CoV-2","CGTAAAAATTTATTGT",7,61.3,9.01,-1.83,0.12,1.77,1.12,0.01,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","CGTAAAACAATCTACT",5,28,10.18,-0.65,0.06,2.95,1.07,0,"1 nonsynonymous","A33K",1
"lib2","SARS-CoV-2","CGTAAAACATTTTCAA",1,30.8,10.45,-0.38,0.08,2.91,1.11,0,"1 nonsynonymous","P169A",1
"lib2","SARS-CoV-2","CGTAAAACCCGCGAAT",6,183.3,10.6,-0.24,0.04,2.94,1.07,0,">1 nonsynonymous","Y35F A89S G155S",3
"lib2","SARS-CoV-2","CGTAAAAGAAAAACCA",15,66.54,8.26,-2.57,0.25,1.5,1.03,0.02,">1 nonsynonymous","Q84H Y165R",2
"lib2","SARS-CoV-2","CGTAAAAGAGAGGCCT",4,39.19,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","W23L G116F N151I",3
"lib2","SARS-CoV-2","CGTAAAAGGGCGAACA",1,29.15,10.22,-0.62,0.11,2.48,1,0.01,">1 nonsynonymous","G9K F99M P197T",3
"lib2","SARS-CoV-2","CGTAAAAGTACATCAC",5,39.56,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34R V77D K94R Y119I G166S V182I",6
"lib2","SARS-CoV-2","CGTAAAAGTTTCAAAC",6,222.87,9.3,-1.53,0.06,2.12,1.07,0,">1 nonsynonymous","V32R Y91L G152I",3
"lib2","SARS-CoV-2","CGTAAAATAAAAAAAA",1,0.26,NA,NA,NA,NA,NA,NA,"stop","C6* V37R V115D Q144K",4
"lib2","SARS-CoV-2","CGTAAAATGACACCAC",1,12.6,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","L5P C61I G86W",3
"lib2","SARS-CoV-2","CGTAAAATTGTCTTAA",5,140.99,8.92,-1.92,0.06,2.52,1.08,0,">1 nonsynonymous","N4M D98A N171G",3
"lib2","SARS-CoV-2","CGTAAACAAGCTAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28V Y35V",2
"lib2","SARS-CoV-2","CGTAAACAGACCACAC",7,1.03,NA,NA,NA,NA,NA,NA,"stop","V20I Y93N F99* G116K G166H",5
"lib2","SARS-CoV-2","CGTAAACATCTTATAT",3,28.02,9.92,-0.92,0.12,2.61,1.07,0,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","CGTAAACCACCTCACT",2,42.85,7.7,-3.13,0.34,1.5,1.15,0.04,">1 nonsynonymous","N107I T170W",2
"lib2","SARS-CoV-2","CGTAAACCCTAGTAAT",3,35.45,9.26,-1.58,0.16,1.81,1.07,0.01,">1 nonsynonymous","N24P V37D C195F",3
"lib2","SARS-CoV-2","CGTAAACCTGCGTGCC",5,72.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19T V71R Y91T",3
"lib2","SARS-CoV-2","CGTAAACGAATAACAA",3,108.96,10.67,-0.16,0.03,2.98,1.01,0,">1 nonsynonymous","R27S L60E",2
"lib2","SARS-CoV-2","CGTAAACGTTCGCGAC",3,88.14,10.75,-0.09,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAAACTCGTAACTA",1,5.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","CGTAAACTTTAGAAAC",12,3.69,NA,NA,NA,NA,NA,NA,"stop","N13A Q79M K132S V182F T201*",5
"lib2","SARS-CoV-2","CGTAAAGAATTAGGGT",5,108.07,10.77,-0.07,0.06,2.94,1.05,0,">1 nonsynonymous","G9S L122S F134H",3
"lib2","SARS-CoV-2","CGTAAAGCGATGGCCT",1,25.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L T55G V65L I72Q A105M Y121L",6
"lib2","SARS-CoV-2","CGTAAAGCGTTACAAC",3,7.74,NA,NA,NA,NA,NA,NA,"stop","C6S V65R F99R S129* P197L",5
"lib2","SARS-CoV-2","CGTAAAGCTATGATGC",3,25.49,9.31,-1.53,0.11,1.87,1.07,0,">1 nonsynonymous","L5Y T100S R127H",3
"lib2","SARS-CoV-2","CGTAAAGGACATAGCG",10,29.89,6.67,-4.17,0.73,1.5,1.3,0.07,">1 nonsynonymous","G51E A81C S147M",3
"lib2","SARS-CoV-2","CGTAAAGTACAATCCC",3,38.87,10.27,-0.57,0.06,2.59,1,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","CGTAAAGTGCCTACTA",4,86.05,10.64,-0.19,0.05,2.97,1,0,"1 nonsynonymous","E135T",1
"lib2","SARS-CoV-2","CGTAAATACACACCCG",2,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E N40M I72R N107I T201P",5
"lib2","SARS-CoV-2","CGTAAATACAGAAGTC",2,12.35,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A33L Q84V P96M V115S",4
"lib2","SARS-CoV-2","CGTAAATACAGTACAC",17,1.14,NA,NA,NA,NA,NA,NA,"stop","P7T Y50T D137*",3
"lib2","SARS-CoV-2","CGTAAATATACGTAAA",7,140.75,9.82,-1.01,0.04,2.83,1.12,0,">1 nonsynonymous","N64Y S164P G174C",3
"lib2","SARS-CoV-2","CGTAAATATCACAAAA",14,35.63,6.59,-4.24,0.57,1.5,1.15,0.05,">1 nonsynonymous","S41I C61A Y93L",3
"lib2","SARS-CoV-2","CGTAAATATTGTAATG",3,8.38,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T55S V103N E141T V173G",4
"lib2","SARS-CoV-2","CGTAAATGTATAGAGG",1,7.25,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K56H D68K C102R R127H",4
"lib2","SARS-CoV-2","CGTAAATTGCTCAACT",1,1.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F47R",1
"lib2","SARS-CoV-2","CGTAAATTTGAAGCGA",6,196.72,9.01,-1.82,0.07,2.4,1.1,0,">1 nonsynonymous","D97N Q176L",2
"lib2","SARS-CoV-2","CGTAAATTTTGAGCAT",3,27.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6V Y121A G155S",3
"lib2","SARS-CoV-2","CGTAACAAATTAACTA",8,80.46,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R27M S36W N58D R124W G155V",5
"lib2","SARS-CoV-2","CGTAACAAGTTATTTA",3,51.78,10.76,-0.08,0.02,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAACACCAATTAAA",6,137.59,8.47,-2.37,0.11,2.45,1.12,0,">1 nonsynonymous","F12V T63D N120T",3
"lib2","SARS-CoV-2","CGTAACACTAACGTTA",4,18.79,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","F12H S69K P149S",3
"lib2","SARS-CoV-2","CGTAACACTGAAATTG",1,5.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G Y39T",2
"lib2","SARS-CoV-2","CGTAACAGAATAGTAT",12,117.3,9.83,-1.01,0.07,2.29,1.06,0,">1 nonsynonymous","S139L S147Y",2
"lib2","SARS-CoV-2","CGTAACAGCTGTGTAC",2,50.16,9.34,-1.5,0.03,2.96,1.05,0,">1 nonsynonymous","G51Q Y119N N130L G166R",4
"lib2","SARS-CoV-2","CGTAACAGTAGATGGG",2,3.6,NA,NA,NA,NA,NA,NA,"stop","L38Q L57* G86R G116K",4
"lib2","SARS-CoV-2","CGTAACCAAACAAGAC",14,203.86,9.18,-1.65,0.04,2.87,1.1,0,">1 nonsynonymous","G9A Q168L",2
"lib2","SARS-CoV-2","CGTAACCATGGTCGTT",4,12.68,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G51C G101Q K114P",3
"lib2","SARS-CoV-2","CGTAACCTAAGACACG",2,16.61,9.72,-1.12,0.18,2.14,1.25,0.02,">1 nonsynonymous","Y35S E135S S164T",3
"lib2","SARS-CoV-2","CGTAACCTAAGATAAA",3,53.76,9.67,-1.17,0.08,2.56,1.04,0,">1 nonsynonymous","C6A G83L",2
"lib2","SARS-CoV-2","CGTAACCTTCTTAGAA",7,27.81,6.96,-3.88,0.32,1.5,1.05,0.02,">1 nonsynonymous","Y35S D68V",2
"lib2","SARS-CoV-2","CGTAACGACAATGGAA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43P A81H R136N S200Y",4
"lib2","SARS-CoV-2","CGTAACGATATAATTA",7,129.67,8.76,-2.07,0.07,2.79,1.09,0,">1 nonsynonymous","A22L Y119M",2
"lib2","SARS-CoV-2","CGTAACGCAAACTTCG",2,50.64,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L38H K87E S113N F160A Q176L A190R",6
"lib2","SARS-CoV-2","CGTAACGCATTATTCG",1,6.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48G A67T Y91C D98S F134H",5
"lib2","SARS-CoV-2","CGTAACGCCTTGATAC",11,214.9,10.18,-0.65,0.02,2.98,1,0,"1 nonsynonymous","C31A",1
"lib2","SARS-CoV-2","CGTAACGCTACGCCGA",17,130.94,9.4,-1.44,0.03,2.88,1.12,0,">1 nonsynonymous","Y119T F160C",2
"lib2","SARS-CoV-2","CGTAACGGTACCACGA",1,38.47,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F47N K94S N107L G152H",4
"lib2","SARS-CoV-2","CGTAACTACTCACTTA",2,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L G86R Y91K D98E",4
"lib2","SARS-CoV-2","CGTAACTCAAAGCTCT",13,68.57,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","A81D E135P C150V",3
"lib2","SARS-CoV-2","CGTAACTCCTAATATG",3,3.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R F47L A105Y G146L N151S",5
"lib2","SARS-CoV-2","CGTAACTTAAAACTTT",10,54.21,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","C49R",1
"lib2","SARS-CoV-2","CGTAACTTGCTCATAT",7,0.59,NA,NA,NA,NA,NA,NA,"stop","S69*",1
"lib2","SARS-CoV-2","CGTAACTTTTAATTCG",1,0.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158F",1
"lib2","SARS-CoV-2","CGTAAGAAAAAAAACG",1,30.8,9.62,-1.21,0.16,2.15,1.11,0.01,">1 nonsynonymous","N120S Y143H L162M",3
"lib2","SARS-CoV-2","CGTAAGACAAGCTACA",2,62.48,9.89,-0.95,0.1,2.31,1.06,0,">1 nonsynonymous","F12Y R16Q",2
"lib2","SARS-CoV-2","CGTAAGATGTTTACCA",9,220.46,8.39,-2.44,0.12,2.7,1.05,0.01,">1 nonsynonymous","N107A Q168L",2
"lib2","SARS-CoV-2","CGTAAGATTAAAGAAG",5,30.99,8,-2.83,0.24,1.5,1.15,0.02,">1 nonsynonymous","D34H C61N P133T N171S",4
"lib2","SARS-CoV-2","CGTAAGATTATATCAG",6,1.14,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","CGTAAGCAAAGAAGAT",2,34.21,10.41,-0.43,0.06,2.9,1.05,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","CGTAAGCATAACTTCC",11,56.41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11I Y21M Y93M Y159N",4
"lib2","SARS-CoV-2","CGTAAGCATGTTGTAG",6,16.7,6.04,-4.8,2,1.5,1.13,0.02,">1 nonsynonymous","F17G C49T L60S Y91I T100R P161R",6
"lib2","SARS-CoV-2","CGTAAGCCCAGTTTTA",6,124.72,9.26,-1.58,0.09,2.52,1.09,0,">1 nonsynonymous","N120L G155F",2
"lib2","SARS-CoV-2","CGTAAGCCGACTTATC",5,1.68,NA,NA,NA,NA,NA,NA,"stop","I2* A105E",2
"lib2","SARS-CoV-2","CGTAAGCCGCCCCAAA",7,66.27,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I88Y V115I F160R",3
"lib2","SARS-CoV-2","CGTAAGCTAAATCGAT",4,83.68,9.32,-1.52,0.1,2.21,1.05,0,">1 nonsynonymous","L5C A14S S53F K87N I138C",5
"lib2","SARS-CoV-2","CGTAAGCTCCATTTCG",7,78.15,7.33,-3.51,0.16,1.69,1.14,0.01,"1 nonsynonymous","L162E",1
"lib2","SARS-CoV-2","CGTAAGGAGATCTTTG",19,569.32,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T55N V77G Y91L V180W P197L",5
"lib2","SARS-CoV-2","CGTAAGGATTACACAG",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N G152S Y175S",3
"lib2","SARS-CoV-2","CGTAAGGCAGATTTAT",2,63.09,10.88,0.05,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAAGGTGCGTCTAG",2,59.62,10.89,0.06,0.05,2.95,1.08,0,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","CGTAAGTAGGATGAAT",2,38.46,10.51,-0.33,0.06,2.9,1.08,0,">1 nonsynonymous","S45N S53N C61Y",3
"lib2","SARS-CoV-2","CGTAAGTATAATTACG",3,59.86,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","P54S C61F E141V Q176S",4
"lib2","SARS-CoV-2","CGTAAGTATTGTAGAG",6,78.81,10.02,-0.82,0.05,2.74,1.06,0,">1 nonsynonymous","C31F G51N L122I T201L",4
"lib2","SARS-CoV-2","CGTAAGTTGAGGCAGG",4,5.64,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","A33T C49F P96Y F167V",4
"lib2","SARS-CoV-2","CGTAATAAAACATACA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","N13S A33* G174L T201V",4
"lib2","SARS-CoV-2","CGTAATAAACAGATTT",2,0.52,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","CGTAATAATAAACTCC",2,75.25,10.48,-0.35,0.06,2.84,1.11,0,">1 nonsynonymous","K26E P149K",2
"lib2","SARS-CoV-2","CGTAATACACCTCCGA",4,22.73,6.9,-3.94,0.39,1.5,1.14,0.04,">1 nonsynonymous","D90F Y123D",2
"lib2","SARS-CoV-2","CGTAATACCACACGGC",5,0.86,NA,NA,NA,NA,NA,NA,"stop","S36* N120Y Y159V",3
"lib2","SARS-CoV-2","CGTAATAGAGGATACC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","F8D R27M S41P L60* W106F",5
"lib2","SARS-CoV-2","CGTAATAGCATCTCGA",7,50.28,9.98,-0.85,0.11,2.43,1.11,0.01,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","CGTAATAGCCATTGAA",4,26.17,10.17,-0.66,0.11,2.83,1.12,0.01,">1 nonsynonymous","P7S P54A D90L",3
"lib2","SARS-CoV-2","CGTAATAGTATGAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36K Y91T F99* P161S T201S",5
"lib2","SARS-CoV-2","CGTAATATTACAATGG",2,8.56,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A14Y R25D K94L S139W C195M",5
"lib2","SARS-CoV-2","CGTAATCACAAAAATT",6,76.14,10.91,0.07,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAATCATATTTACA",9,67.63,10.2,-0.64,0.06,2.81,1.03,0,">1 nonsynonymous","S41D C61V D90G",3
"lib2","SARS-CoV-2","CGTAATCCATATTTTT",5,25.59,9.85,-0.99,0.13,2.09,1,0.01,">1 nonsynonymous","T15N P96T N120E",3
"lib2","SARS-CoV-2","CGTAATCTGAACATCA",3,23.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61D F99V P169L Y175H",4
"lib2","SARS-CoV-2","CGTAATGAACAACTCA",12,87.3,6.51,-4.33,0.34,1.5,1.19,0.01,">1 nonsynonymous","I88T Y143L V153N",3
"lib2","SARS-CoV-2","CGTAATGATAAAGAAT",4,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F R73K V103R",3
"lib2","SARS-CoV-2","CGTAATTAATACCCAG",7,366.66,8.88,-1.96,0.05,2.88,1.08,0,">1 nonsynonymous","G9F G155P",2
"lib2","SARS-CoV-2","CGTAATTATGAGTAGT",3,30.98,6,-4.84,1.22,1.66,1.13,0.01,">1 nonsynonymous","G86T K128H F156D",3
"lib2","SARS-CoV-2","CGTAATTATTCTCGTA",6,52.78,6.97,-3.87,0.31,1.5,1.2,0.02,">1 nonsynonymous","A22W Y35P T85D T201W",4
"lib2","SARS-CoV-2","CGTAATTCTCGTGCTT",2,39.06,11.01,0.18,0.06,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAATTTATGTGACA",1,6.21,10.42,-0.42,0.08,2.94,1,0,">1 nonsynonymous","A42S C61Y E141F",3
"lib2","SARS-CoV-2","CGTAATTTGAGCAGCG",6,33.51,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","R27S C61S W106L K128C G152Y",5
"lib2","SARS-CoV-2","CGTAATTTGCATTGGG",1,64.54,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","CGTACAAAAAGTCACC",12,188.11,7.64,-3.2,0.17,1.5,1.06,0.01,">1 nonsynonymous","G83N N107R G117D",3
"lib2","SARS-CoV-2","CGTACAAACCCGCAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","CGTACAAACGACTTGG",8,42.64,6,-4.84,1.5,1.5,1.12,0.01,">1 nonsynonymous","V37P N58I L183A L188N",4
"lib2","SARS-CoV-2","CGTACAAATATATCAA",6,22.63,10.24,-0.6,0.17,2.69,1.28,0.01,"1 nonsynonymous","K48T",1
"lib2","SARS-CoV-2","CGTACAACATACTGTA",8,92.21,10.16,-0.67,0.04,2.94,1.03,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","CGTACAATAAGGAATT",8,82.02,9.94,-0.89,0.07,2.64,1.04,0,">1 nonsynonymous","D34L L60T",2
"lib2","SARS-CoV-2","CGTACAATACAGACCT",1,10.24,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","T46G P133L",2
"lib2","SARS-CoV-2","CGTACAATGTACCTAA",2,11.73,6,-4.84,2,1.5,1.24,0.07,"1 nonsynonymous","R179W",1
"lib2","SARS-CoV-2","CGTACACAGCTTTCTG",5,34.78,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","R25L F47L Y119G E186S",4
"lib2","SARS-CoV-2","CGTACACATCCCTAGT",7,51.26,6,-4.84,1.86,3,1.17,0,">1 nonsynonymous","Y93S W106M E141L",3
"lib2","SARS-CoV-2","CGTACACCCGGATTCC",5,2.2,NA,NA,NA,NA,NA,NA,"stop","V77M Q163*",2
"lib2","SARS-CoV-2","CGTACACCGCTAACAC",2,11.33,9.6,-1.23,0.11,2.11,1,0.01,">1 nonsynonymous","F62N A89V",2
"lib2","SARS-CoV-2","CGTACACGACAAACTA",6,1.8,NA,NA,NA,NA,NA,NA,"stop","V32* Y50G",2
"lib2","SARS-CoV-2","CGTACACGGCGAACGA",14,164.46,10.82,-0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTACACGTCTAAATG",2,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S S45D Y91P A145V F185M",5
"lib2","SARS-CoV-2","CGTACAGCACCCCAGT",4,16.47,9.04,-1.79,0.2,1.6,1.03,0.02,">1 nonsynonymous","C31T V52H T63A S200K",4
"lib2","SARS-CoV-2","CGTACAGGTGTAATCT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","A89Q D97V L122* N157I",4
"lib2","SARS-CoV-2","CGTACATAATAGAATA",5,54.44,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","V20S P54I V77M Y175N",4
"lib2","SARS-CoV-2","CGTACATACCAACTGT",2,3.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","CGTACATACCAGAGAT",16,166.22,10.69,-0.15,0.03,2.96,1.05,0,"1 nonsynonymous","N110C",1
"lib2","SARS-CoV-2","CGTACATAGTCACGAT",6,111.52,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61K D112K",2
"lib2","SARS-CoV-2","CGTACATCACGAGGGA",2,32.28,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y91H W106C S113D N130L P197L",5
"lib2","SARS-CoV-2","CGTACATTCAACGGAC",8,107.02,8.8,-2.04,0.05,2.38,1.07,0,">1 nonsynonymous","V11I G74Y P149T",3
"lib2","SARS-CoV-2","CGTACATTCTGACAGT",3,24.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7S N58Y Y93K",3
"lib2","SARS-CoV-2","CGTACATTTTTGTCAA",4,84.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83Q Y119M F126V G155N Q176I",5
"lib2","SARS-CoV-2","CGTACCAAATGACAAA",1,61.79,9.83,-1,0.07,2.29,1.02,0,">1 nonsynonymous","A14V F44D A105T P197S",4
"lib2","SARS-CoV-2","CGTACCAATCAAGTCG",10,73.67,9.23,-1.61,0.16,1.79,1.04,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","CGTACCACGGCTTTTT",7,0.26,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","CGTACCAGAGTAAACT",12,203.36,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N24V N92P",2
"lib2","SARS-CoV-2","CGTACCATTCCACAAG",3,32.47,9.99,-0.84,0.06,2.87,1,0,"1 nonsynonymous","C6M",1
"lib2","SARS-CoV-2","CGTACCCAAGTGCAAT",2,7.07,9.01,-1.83,0.43,1.75,1.14,0.06,">1 nonsynonymous","N13H K56M L131V G146H",4
"lib2","SARS-CoV-2","CGTACCCATGAACAAT",5,29.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49G T63A G86A D112S",4
"lib2","SARS-CoV-2","CGTACCCGACAATTGA",1,20.27,7.66,-3.17,0.21,1.5,1.02,0.01,">1 nonsynonymous","P96L K114F",2
"lib2","SARS-CoV-2","CGTACCCTTTAGAATG",6,54.82,6,-4.84,1.36,1.5,1.23,0.03,">1 nonsynonymous","A14P A33S T55W Q79R P149E Q176V",6
"lib2","SARS-CoV-2","CGTACCGAATACCATA",2,25.52,9.91,-0.92,0.16,1.86,1.14,0.01,">1 nonsynonymous","S41T T55P A105S Q144V",4
"lib2","SARS-CoV-2","CGTACCGTGGCCGAAC",4,60.83,10.84,0.01,0.08,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTACCTAGTTTCTAA",4,66.56,10.62,-0.21,0.05,2.9,1.02,0,">1 nonsynonymous","F44L D98G Q168H",3
"lib2","SARS-CoV-2","CGTACCTATGAGTATA",4,22.17,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","D90Y F99R",2
"lib2","SARS-CoV-2","CGTACCTGCAAACCAT",9,152.63,10.02,-0.82,0.06,2.46,1.04,0,">1 nonsynonymous","A81R I104C",2
"lib2","SARS-CoV-2","CGTACGAATGCATCTA",2,35.86,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S19Y T63I R127E",3
"lib2","SARS-CoV-2","CGTACGACCACGAGTG",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R R136T K199F",3
"lib2","SARS-CoV-2","CGTACGCCTACGGTCG",4,19.86,9.74,-1.09,0.1,2.91,1.07,0,">1 nonsynonymous","Q84V N171L",2
"lib2","SARS-CoV-2","CGTACGGAGTTACAAG",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84N D90I",2
"lib2","SARS-CoV-2","CGTACGGCACATGAGG",1,7.51,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5M C61D F99S I142A",4
"lib2","SARS-CoV-2","CGTACGGGCGATTCAC",1,10.86,10.92,0.08,0.12,2.97,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CGTACGGTTCTAAGCC",3,143.82,10.45,-0.39,0.05,2.89,1.07,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","CGTACGTACCCTGTGT",4,55.55,8.3,-2.53,0.13,2.33,1.12,0.01,">1 nonsynonymous","A33R A145L",2
"lib2","SARS-CoV-2","CGTACGTACGAAAATC",4,134.95,9.81,-1.03,0.05,2.84,1.06,0,">1 nonsynonymous","I142K K198L",2
"lib2","SARS-CoV-2","CGTACTAAAAAGACTA",1,5.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33S R127H G146A P169S",4
"lib2","SARS-CoV-2","CGTACTAAAATCTCCA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P197*",1
"lib2","SARS-CoV-2","CGTACTAAAATTATGC",2,55.25,10.58,-0.26,0.06,2.9,1.02,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","CGTACTAAATAACCTA",3,45.61,8.4,-2.43,0.12,2.75,1.03,0.01,"1 nonsynonymous","G146I",1
"lib2","SARS-CoV-2","CGTACTAACAAATCAG",4,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S43M N64E Y119W P149S G152D V173R",7
"lib2","SARS-CoV-2","CGTACTACCCCTGACC",1,6.43,10.09,-0.74,0.17,2.83,1,0.01,">1 nonsynonymous","Y121N P191S",2
"lib2","SARS-CoV-2","CGTACTAGAAGTCAAT",1,31.05,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S45I D90F L183V K198L",4
"lib2","SARS-CoV-2","CGTACTCAAGAAAACA",2,32.43,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G74F F99P Y143L H189N",4
"lib2","SARS-CoV-2","CGTACTCAAGACAGAC",5,67.34,9.35,-1.49,0.07,2.07,1.09,0,">1 nonsynonymous","V20I C61V V77M T100V",4
"lib2","SARS-CoV-2","CGTACTCAAGATTAAT",2,141.05,10.73,-0.11,0.04,2.92,1.07,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CGTACTCACCCCCGAA",1,14.02,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D68A D97Y G146V C150E",4
"lib2","SARS-CoV-2","CGTACTCCTTGACTCA",9,98.75,9.53,-1.31,0.11,1.94,1.05,0,">1 nonsynonymous","R136P T201R",2
"lib2","SARS-CoV-2","CGTACTGATAGATACT",12,59.69,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F17L Y21L V71K D90V F99L S139I",6
"lib2","SARS-CoV-2","CGTACTGCGGTAATCC",8,152.8,9.93,-0.91,0.04,2.74,1.02,0,">1 nonsynonymous","D90L G155R",2
"lib2","SARS-CoV-2","CGTACTGGGGAATACG",29,471.13,10.86,0.02,0.05,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CGTACTGTAAGGTTCG",2,81.48,8.25,-2.58,0.37,1.5,1,0.05,">1 nonsynonymous","D90N A105F S139R Y178I",4
"lib2","SARS-CoV-2","CGTACTTAAGCTGGAG",2,37.03,10.89,0.05,0.07,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGAAAAACGAATT",3,2.24,NA,NA,NA,NA,NA,NA,"stop","Y91M Y123*",2
"lib2","SARS-CoV-2","CGTAGAAATAAATCAA",1,25.58,10.8,-0.03,0.07,2.92,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGAAATTCTTACT",4,66.93,9.54,-1.29,0.15,1.85,1.08,0.01,">1 nonsynonymous","S41L P133R",2
"lib2","SARS-CoV-2","CGTAGAACTAGCCAGG",11,116.52,10.78,-0.06,0.03,3,1.02,0,">1 nonsynonymous","F8L D98N C195R",3
"lib2","SARS-CoV-2","CGTAGAAGACAGTGTA",6,1.11,NA,NA,NA,NA,NA,NA,"stop","N24R P54* Q84H Y159W",4
"lib2","SARS-CoV-2","CGTAGAATATATATAC",7,48.3,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2T D68G G155S",3
"lib2","SARS-CoV-2","CGTAGAATCGCGCCTA",4,38.94,10.97,0.13,0.07,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","CGTAGAATCTTATGCA",11,1.81,NA,NA,NA,NA,NA,NA,"stop","T3Y A42T L95* L122F G174I",5
"lib2","SARS-CoV-2","CGTAGAATTTCAAAAG",10,59.83,6.73,-4.11,0.5,1.5,1.24,0.04,">1 nonsynonymous","K87M W106R R136L P149R V173M P197Q T201A",7
"lib2","SARS-CoV-2","CGTAGACGCATTTCAC",9,41.2,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50L L57R K114Q",3
"lib2","SARS-CoV-2","CGTAGACTGGCGATTT",4,52.41,10.77,-0.06,0.06,2.95,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CGTAGACTTAAGAAAC",10,198.7,10.24,-0.6,0.03,2.84,1.07,0,">1 nonsynonymous","G9L N64M N120A",3
"lib2","SARS-CoV-2","CGTAGAGAACACCACG",8,81.7,9.31,-1.53,0.1,1.65,1.1,0,">1 nonsynonymous","A18T L38S",2
"lib2","SARS-CoV-2","CGTAGAGAAGATTACA",6,1.59,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGAGCCGAGTGGG",10,98.09,10.81,-0.03,0.04,3,1.03,0,">1 nonsynonymous","N4T N40A",2
"lib2","SARS-CoV-2","CGTAGAGCTAGCTTGT",4,25.27,7.51,-3.33,0.41,1.5,1.03,0.05,">1 nonsynonymous","E10L S41L G83I A89R Q144H",5
"lib2","SARS-CoV-2","CGTAGATAGAGTTCAA",6,7.36,NA,NA,NA,NA,NA,NA,"stop","Y66* V77L W106S L122F V182H",5
"lib2","SARS-CoV-2","CGTAGATATGGCTCCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","CGTAGATGAAAACTTG",6,10.43,NA,NA,NA,NA,NA,NA,"stop","K56W L95* S113D E154K",4
"lib2","SARS-CoV-2","CGTAGATGTCGACACT",12,197.68,10.71,-0.13,0.03,2.9,1.03,0,">1 nonsynonymous","S41V T85R",2
"lib2","SARS-CoV-2","CGTAGATTCAGAGGGT",3,74.78,9.78,-1.06,0.07,2.02,1.04,0,">1 nonsynonymous","S29W T63S S139L",3
"lib2","SARS-CoV-2","CGTAGATTGCACCGGC",8,87.5,9.34,-1.5,0.16,1.57,1.07,0.01,">1 nonsynonymous","G83D D90V",2
"lib2","SARS-CoV-2","CGTAGATTGTCATCAG",1,78.53,10.77,-0.07,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGATTTGACCCTA",1,2.02,NA,NA,NA,NA,NA,NA,"stop","V32E K56W L122I E135* P197L",5
"lib2","SARS-CoV-2","CGTAGATTTTTTAGAA",2,14.19,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K26P E141D S164N",3
"lib2","SARS-CoV-2","CGTAGCAAGAAGTTCG",9,116,10.86,0.02,0.03,2.95,1.05,0,"1 nonsynonymous","N130Q",1
"lib2","SARS-CoV-2","CGTAGCACTACCGGAT",1,6.83,10.23,-0.61,0.2,2.72,1,0.01,">1 nonsynonymous","T15P K87N W106N P197T",4
"lib2","SARS-CoV-2","CGTAGCATTACACCGT",5,2.63,NA,NA,NA,NA,NA,NA,"stop","L57H G101D G116P T140D Q144*",5
"lib2","SARS-CoV-2","CGTAGCCATGCCCACA",5,43.82,10.03,-0.8,0.06,2.89,1.15,0,">1 nonsynonymous","L95V Y119R",2
"lib2","SARS-CoV-2","CGTAGCCCAAGCCGAA",5,165.09,9.43,-1.4,0.06,2.76,1.06,0,">1 nonsynonymous","S19N G174F",2
"lib2","SARS-CoV-2","CGTAGCCTTTTAGAAA",7,53.73,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","T3M N92T S108T T201L",4
"lib2","SARS-CoV-2","CGTAGCGCGATGTATA",4,36.1,6,-4.84,1.45,1.5,1.29,0.03,">1 nonsynonymous","W23V K56L L122H V173I",4
"lib2","SARS-CoV-2","CGTAGCTCCAACCTAC",3,54.14,10.3,-0.53,0.03,2.86,1,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","CGTAGCTTCCCCACAG",2,11.02,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","S43M Y50S P82L E154N",4
"lib2","SARS-CoV-2","CGTAGGAAAAAATGCG",3,33.11,10.69,-0.14,0.08,2.92,1.07,0,">1 nonsynonymous","I2S E10D K114R Y123M",4
"lib2","SARS-CoV-2","CGTAGGAAAGAGGCCG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","R27* G146M G155I",3
"lib2","SARS-CoV-2","CGTAGGATTGGGTCGA",19,323.62,10.83,-0.01,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGGCACAAATTAA",3,32.47,10.93,0.09,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTAGGCCTTTTATAC",7,41.46,10.49,-0.35,0.07,2.95,1.04,0,">1 nonsynonymous","N24A I80V",2
"lib2","SARS-CoV-2","CGTAGGGATAGATGTT",4,18.7,7.43,-3.4,0.5,1.5,1.3,0.07,">1 nonsynonymous","E10T I28H K87G W106R",4
"lib2","SARS-CoV-2","CGTAGGGCGGTCAGGT",4,30.3,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F62P I104M L162Q",3
"lib2","SARS-CoV-2","CGTAGGGCTTTAATCT",1,56.58,6.12,-4.71,0.57,1.5,1.12,0.01,">1 nonsynonymous","F126L C158K",2
"lib2","SARS-CoV-2","CGTAGGTACATTAATA",9,76.91,7.47,-3.36,0.28,1.5,1.1,0.02,">1 nonsynonymous","V103L Y123S",2
"lib2","SARS-CoV-2","CGTAGGTACATTTTTA",4,25.77,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L5R E76W G86K P96I",4
"lib2","SARS-CoV-2","CGTAGGTCTAGAAGCC",2,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119H N171G",2
"lib2","SARS-CoV-2","CGTAGTAAAAGAGCGG",6,68.03,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61H Y93D",2
"lib2","SARS-CoV-2","CGTAGTAAACGAATGT",7,183.71,7.55,-3.29,0.16,1.5,1.08,0.01,">1 nonsynonymous","I138Q Y175R S184F",3
"lib2","SARS-CoV-2","CGTAGTAAACTTAGGC",3,119.76,10.7,-0.14,0.04,2.97,1.03,0,">1 nonsynonymous","D98S G174N",2
"lib2","SARS-CoV-2","CGTAGTAACAATTTAC",2,22.52,8.22,-2.62,0.23,1.76,1.1,0.02,">1 nonsynonymous","Y119S S129M Y178L C195Q",4
"lib2","SARS-CoV-2","CGTAGTAAGTAACGAT",4,136.81,7.86,-2.98,0.07,2.1,1.04,0,">1 nonsynonymous","Y119S Y143E",2
"lib2","SARS-CoV-2","CGTAGTAAGTCACACA",6,64.34,10.55,-0.29,0.04,2.94,1.03,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","CGTAGTAATTCAAGCG",1,10.62,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T55V F62R Q79M A89M",4
"lib2","SARS-CoV-2","CGTAGTACTTGTATTC",1,0.67,NA,NA,NA,NA,NA,NA,"stop","G83M G116K E135P E154V G172*",5
"lib2","SARS-CoV-2","CGTAGTATTGAGGTCA",9,70.11,9.37,-1.46,0.04,2,1.04,0,">1 nonsynonymous","T63F N107R",2
"lib2","SARS-CoV-2","CGTAGTCACATAAGAC",1,9.94,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","A14S N92T",2
"lib2","SARS-CoV-2","CGTAGTCATTATACAA",2,286.9,6.66,-4.17,0.41,1.5,1.15,0.02,">1 nonsynonymous","P82N K198E",2
"lib2","SARS-CoV-2","CGTAGTCCCTCCAGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F44A G166S Q176*",3
"lib2","SARS-CoV-2","CGTAGTCGTACATGTA",2,13.76,7.51,-3.33,0.34,1.5,1.1,0.02,">1 nonsynonymous","A14Q C61R T85L Y143M V173G",5
"lib2","SARS-CoV-2","CGTAGTCTACATAGAG",11,140.42,10.43,-0.41,0.04,2.9,1.07,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","CGTAGTCTCATAACAA",2,86.37,10.19,-0.65,0.03,2.92,1.05,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","CGTAGTGAAAATTTAC",13,31.53,6,-4.84,1.65,3,1.2,0.01,">1 nonsynonymous","N1H S45F G74E F99Y E141R",5
"lib2","SARS-CoV-2","CGTAGTGAAACCACTG",21,223.93,10.84,0,0.03,2.95,1.07,0,"1 nonsynonymous","T148K",1
"lib2","SARS-CoV-2","CGTAGTTATGATAGGC",1,9.76,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5H L38P A145L",3
"lib2","SARS-CoV-2","CGTAGTTATGCCCATA",1,6.28,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N24R I88T P96T V103T I142F F160T",6
"lib2","SARS-CoV-2","CGTAGTTCAAATACAT",13,2.96,NA,NA,NA,NA,NA,NA,"stop","D98S F126P S200*",3
"lib2","SARS-CoV-2","CGTAGTTTTTACACCG",4,44.79,8.59,-2.25,0.12,2.91,1.08,0,">1 nonsynonymous","N4K T63A A89S N157S",4
"lib2","SARS-CoV-2","CGTATAAATATATCAG",4,93.7,10.9,0.07,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTATAAATATGAAAA",16,14.55,NA,NA,NA,NA,NA,NA,"stop","K48* G83C I88S",3
"lib2","SARS-CoV-2","CGTATAAATTATTACC",7,32.05,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L57W P82C E154F T201R",4
"lib2","SARS-CoV-2","CGTATAAATTTCTCGT",6,109.03,10.81,-0.03,0.05,2.92,1.08,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","CGTATAACCCTCGAAA",1,1.33,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CGTATAACGAAAGACA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","S41D D59* Y178M",3
"lib2","SARS-CoV-2","CGTATAATAATTCCGA",3,46.42,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F8I S29E I80F N109V R136P T201L",6
"lib2","SARS-CoV-2","CGTATAATACGTTTCA",1,42.71,6,-4.84,2,3,1.21,0,">1 nonsynonymous","G74T A81N T85S N92R F167E",5
"lib2","SARS-CoV-2","CGTATAATATCTCTGC",6,129.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37S G83N Y93S F99T Y121V R127K",6
"lib2","SARS-CoV-2","CGTATAATATCTTTCG",1,30.52,10.1,-0.74,0.1,2.82,1.06,0,">1 nonsynonymous","D59F Y121Q E141D",3
"lib2","SARS-CoV-2","CGTATAATATTCAAAT",2,103.97,10.78,-0.06,0.05,2.85,1.14,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","CGTATAATCCTCATAA",10,206.29,10.84,0,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTATAATGCTTTCTG",5,108.11,9.81,-1.03,0.06,2.32,1,0,">1 nonsynonymous","S36A A81V F126L T201K",4
"lib2","SARS-CoV-2","CGTATACACAAGTGGT",6,56.2,10.89,0.05,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTATACATTCAGACT",1,1.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","CGTATATAAAATTTTA",4,72.63,10.65,-0.19,0.06,2.93,1.06,0,">1 nonsynonymous","T3K L122S K132P",3
"lib2","SARS-CoV-2","CGTATATAGAATAAAA",2,69.84,10.85,0.02,0.05,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CGTATATAGCCTCAGA",14,112.35,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G101C Y119L",2
"lib2","SARS-CoV-2","CGTATATCTTGAACAG",3,38.09,6,-4.84,2,1.5,1.29,0.05,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","CGTATATGGATTGACC",3,24.45,8.02,-2.81,0.33,1.5,1,0.04,">1 nonsynonymous","C49L T85I",2
"lib2","SARS-CoV-2","CGTATATTAGCTGACA",7,214.16,10.25,-0.58,0.03,2.93,1.05,0,">1 nonsynonymous","W106L V115S P197I",3
"lib2","SARS-CoV-2","CGTATATTGACTTCGG",3,7.06,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L57R N92H",2
"lib2","SARS-CoV-2","CGTATATTTACGGACG",11,0.09,NA,NA,NA,NA,NA,NA,"stop","I2A D68* Y123G R136F",4
"lib2","SARS-CoV-2","CGTATATTTGGTATAC",13,349.01,10.33,-0.51,0.03,2.87,1.03,0,"1 nonsynonymous","K94C",1
"lib2","SARS-CoV-2","CGTATCAAAATGGACG",13,8.71,NA,NA,NA,NA,NA,NA,"stop","V77M Y91K F99M Y143* T170K",5
"lib2","SARS-CoV-2","CGTATCAATCGAACAC",1,9.21,6,-4.84,2,1.5,1,0,">1 nonsynonymous","F47G L95S",2
"lib2","SARS-CoV-2","CGTATCAGAACTCAAA",5,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14N N40D A192T P197C",4
"lib2","SARS-CoV-2","CGTATCCACTACTAAA",17,23.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33T A89C L95V V103N",4
"lib2","SARS-CoV-2","CGTATCCTACAGCGCA",1,12.42,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V37P G74P F156S",3
"lib2","SARS-CoV-2","CGTATCCTAGAGCGCA",2,7.36,10.24,-0.59,0.14,2.87,1.1,0,">1 nonsynonymous","T85E T100Y T140P",3
"lib2","SARS-CoV-2","CGTATCGACTTCGCGG",3,0.93,NA,NA,NA,NA,NA,NA,"stop","C49* A67F A89P K114I",4
"lib2","SARS-CoV-2","CGTATCTAACAACAGG",12,148.27,10.92,0.08,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTATCTAGTTCTCAT",4,9.91,NA,NA,NA,NA,NA,NA,"stop","N4Y N13* A18H S36L K48* G74N L95*",7
"lib2","SARS-CoV-2","CGTATCTCGTTGCATA",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F A89K T170S",3
"lib2","SARS-CoV-2","CGTATGAACGTATAAC",2,6.38,NA,NA,NA,NA,NA,NA,"stop","S113I Y121* I142R P169I",4
"lib2","SARS-CoV-2","CGTATGAAGTATACCA",9,0.6,NA,NA,NA,NA,NA,NA,"stop","A42S D98* K128D E186T",4
"lib2","SARS-CoV-2","CGTATGAGTGTCCATA",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T C102M F134L H189N",4
"lib2","SARS-CoV-2","CGTATGATGCCCAATA",1,11.94,10.15,-0.68,0.11,2.24,1,0.01,"1 nonsynonymous","A14F",1
"lib2","SARS-CoV-2","CGTATGCACATTGTCG",1,34.31,7.48,-3.35,0.35,1.5,1.04,0.04,">1 nonsynonymous","I2S N24P Y91I I138A",4
"lib2","SARS-CoV-2","CGTATGCAGTCATGCA",4,15.18,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N92R I138Q Q168Y",3
"lib2","SARS-CoV-2","CGTATGCTCATCTAGA",5,26.3,6.01,-4.83,1.68,1.5,1.16,0.05,">1 nonsynonymous","Y35G A81T I88S N118G",4
"lib2","SARS-CoV-2","CGTATGGAAAGACCAA",4,47.32,11.01,0.17,0.05,2.98,1.01,0,"1 nonsynonymous","Y35W",1
"lib2","SARS-CoV-2","CGTATGGTACAGGATA",5,80.85,10.65,-0.19,0.03,3,1,0,">1 nonsynonymous","Q84H T201G",2
"lib2","SARS-CoV-2","CGTATGTAAAGAAAAA",9,6.02,NA,NA,NA,NA,NA,NA,"stop","G9S Q176*",2
"lib2","SARS-CoV-2","CGTATGTTGGTCAGTA",2,15.87,8.89,-1.95,0.25,1.57,1.09,0.02,">1 nonsynonymous","A33G L57G D90T",3
"lib2","SARS-CoV-2","CGTATTAAAACAGCAT",4,14.09,8.42,-2.42,0.13,2.55,1.06,0.01,">1 nonsynonymous","Y91A Y119F",2
"lib2","SARS-CoV-2","CGTATTAAATCCCAGA",8,130.84,10.8,-0.04,0.04,2.93,1.03,0,"1 nonsynonymous","K114Q",1
"lib2","SARS-CoV-2","CGTATTACAGTTGGGC",1,26.11,10.22,-0.61,0.09,2.85,1.07,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","CGTATTACCCACTCCA",3,44.35,10.79,-0.05,0.05,2.92,1.09,0,"1 nonsynonymous","I138K",1
"lib2","SARS-CoV-2","CGTATTATTAGTCATT",2,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G C49H C102F",3
"lib2","SARS-CoV-2","CGTATTATTTGTTAAA",2,29.31,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","C61L G74C G83S V103S N120T L183S",6
"lib2","SARS-CoV-2","CGTATTCAAATACACT",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8V Y119M",2
"lib2","SARS-CoV-2","CGTATTCAACACCGAG",6,44.07,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F8D Y39D N107D",3
"lib2","SARS-CoV-2","CGTATTCCATGAAACT",11,70.93,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","K56L N92W D98L V103I",4
"lib2","SARS-CoV-2","CGTATTCCTTTTATCG",5,112.9,10.25,-0.59,0.05,2.76,1.02,0,">1 nonsynonymous","F134S S184V",2
"lib2","SARS-CoV-2","CGTATTGCTCAGAGAC",3,30.26,10.46,-0.38,0.08,2.94,1.03,0,">1 nonsynonymous","R16M L57M",2
"lib2","SARS-CoV-2","CGTATTTCAGCGAAAA",5,0.37,NA,NA,NA,NA,NA,NA,"stop","E10V D68L I80* V103E G146S V182G P191S",7
"lib2","SARS-CoV-2","CGTCAAAACATGAGGT",2,23.09,10.87,0.04,0.07,2.97,1.06,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","CGTCAAAAGAATTTCA",8,34.79,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","F17L T148N N151M V180A",4
"lib2","SARS-CoV-2","CGTCAAACGCATCTTT",1,12.75,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y93R I138E Q144K",3
"lib2","SARS-CoV-2","CGTCAAAGTTTACTCA",3,7.88,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","T55N L183R",2
"lib2","SARS-CoV-2","CGTCAAATACCCACGC",9,122.31,10.79,-0.05,0.04,2.92,1.08,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","CGTCAAATAGTTTTAA",8,0.69,NA,NA,NA,NA,NA,NA,"stop","I2* T55R T170F",3
"lib2","SARS-CoV-2","CGTCAAATCCGAATTT",1,35.88,9.82,-1.02,0.12,2.62,1.04,0.01,">1 nonsynonymous","T46R F126M F160L",3
"lib2","SARS-CoV-2","CGTCAAATGTCCCGCT",6,77.51,9.8,-1.04,0.06,2.75,1.05,0,">1 nonsynonymous","S41L T140K P169M",3
"lib2","SARS-CoV-2","CGTCAACAATTATAGT",10,71.06,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L5Q A89Q P96S Y165C T170N",5
"lib2","SARS-CoV-2","CGTCAACAGAACATGG",12,156.74,10.83,0,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCAACAGGTGTTAA",5,159.95,10.85,0.01,0.04,2.96,1.05,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","CGTCAACCAACCAATG",2,23.13,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C6S V71K Y93H",3
"lib2","SARS-CoV-2","CGTCAACGAATGCAGA",5,82.56,10.25,-0.58,0.05,2.81,1.06,0,"1 nonsynonymous","P133Y",1
"lib2","SARS-CoV-2","CGTCAACTCCATTTGT",6,24.12,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","K26L I104M Y123D",3
"lib2","SARS-CoV-2","CGTCAAGAATAAAAAG",13,250.49,10.22,-0.61,0.02,2.97,1.03,0,">1 nonsynonymous","Y35A K87M",2
"lib2","SARS-CoV-2","CGTCAATAAGCGCAAC",2,7.88,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","V37N N58Y D97T C158S T170C Y175F A190Y",7
"lib2","SARS-CoV-2","CGTCAATAATAAAATT",12,112.5,9.01,-1.82,0.07,1.99,1.04,0,">1 nonsynonymous","T15R V37N A105Y E154D",4
"lib2","SARS-CoV-2","CGTCAATAATTGGCCA",1,9.52,10.96,0.13,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCAATATGCCAGGA",3,14.11,6,-4.84,1.48,1.5,1.12,0.04,">1 nonsynonymous","V37N A67T F99W R124Y I142G",5
"lib2","SARS-CoV-2","CGTCAATTGTTAACAT",2,7.44,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","C31G S36K W106P",3
"lib2","SARS-CoV-2","CGTCACAACGGTGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A K48P N92Q E141V P149H Y159A",6
"lib2","SARS-CoV-2","CGTCACAAGTCTGCGT",2,28.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P D75L",2
"lib2","SARS-CoV-2","CGTCACAGAAATCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138S V182M",2
"lib2","SARS-CoV-2","CGTCACATGTTATTAA",7,0.47,NA,NA,NA,NA,NA,NA,"stop","D98M C102K K114R V153E Q176* V181K",6
"lib2","SARS-CoV-2","CGTCACCATAGTGGTA",2,2.74,NA,NA,NA,NA,NA,NA,"stop","A14* Q84K D98L Q176E",4
"lib2","SARS-CoV-2","CGTCACCCTTAAGTGA",2,40.62,9.86,-0.97,0.09,2.13,1.04,0,">1 nonsynonymous","E10R K48S S53Y",3
"lib2","SARS-CoV-2","CGTCACCGTCCAATTG",3,74.18,9.02,-1.81,0.06,2.82,1.13,0,"1 nonsynonymous","Y119C",1
"lib2","SARS-CoV-2","CGTCACGGTGAGCAGC",11,217.7,9.93,-0.91,0.08,2.29,1.02,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CGTCACTCACGAGTTT",1,1.55,NA,NA,NA,NA,NA,NA,"stop","D97* Y123V G146E N157E F167I",5
"lib2","SARS-CoV-2","CGTCAGACAGTGGACG",8,3.98,NA,NA,NA,NA,NA,NA,"stop","G9K I28* N107K V115W G174V",5
"lib2","SARS-CoV-2","CGTCAGATACCTCTCA",9,71.77,9.08,-1.76,0.19,1.5,1,0.02,">1 nonsynonymous","N24V Y50M S164R",3
"lib2","SARS-CoV-2","CGTCAGCCTAACATAT",9,85.77,8.35,-2.48,0.4,1.5,1,0.07,">1 nonsynonymous","N4I S45K I80L F134G",4
"lib2","SARS-CoV-2","CGTCAGGAGGATAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F62I T170C S200*",3
"lib2","SARS-CoV-2","CGTCAGTAAGGCTTAT",9,130.41,10.65,-0.19,0.04,2.96,1.05,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","CGTCAGTGCCGGAGTA",2,15.16,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","V11H R25V S41R G86H",4
"lib2","SARS-CoV-2","CGTCATAAACCAATAC",11,142.64,9.51,-1.33,0.08,2.54,1.05,0,">1 nonsynonymous","I88V N109W T201S",3
"lib2","SARS-CoV-2","CGTCATAAATACCCAC",9,65.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6R C61F I104L G172M F185I",5
"lib2","SARS-CoV-2","CGTCATAACAATATGC",9,88.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L95H L131Y G146S",3
"lib2","SARS-CoV-2","CGTCATAAGTGCTTCT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185W",1
"lib2","SARS-CoV-2","CGTCATACATCAACAG",13,168.1,10.24,-0.6,0.03,2.88,1.07,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","CGTCATACCATCATAT",5,64.03,10.21,-0.63,0.04,2.98,1.03,0,"1 nonsynonymous","P169M",1
"lib2","SARS-CoV-2","CGTCATACCCCGCTCG",1,1.57,NA,NA,NA,NA,NA,NA,"stop","Y35S A105*",2
"lib2","SARS-CoV-2","CGTCATATACCCCGCA",2,16.29,10.62,-0.22,0.13,2.81,1.12,0.01,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","CGTCATCCGAATCACC",1,6.96,10.75,-0.09,0.02,2.98,1.04,0,"1 nonsynonymous","L122E",1
"lib2","SARS-CoV-2","CGTCATCCTCCAGATA",2,0.5,NA,NA,NA,NA,NA,NA,"stop","S19R K56*",2
"lib2","SARS-CoV-2","CGTCATCTATCACAAA",2,21.62,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R16C V52C P96V Y165L",4
"lib2","SARS-CoV-2","CGTCATCTGACTGGGA",2,41.82,10.89,0.06,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCATCTGGTTCACG",11,67.78,8.97,-1.86,0.15,1.55,1.07,0.01,">1 nonsynonymous","T85P F99M",2
"lib2","SARS-CoV-2","CGTCATTAATCCTATG",12,2.77,NA,NA,NA,NA,NA,NA,"stop","Q84* G101D N120Y T201K",4
"lib2","SARS-CoV-2","CGTCATTGCATCTTCA",8,7.1,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F47K G83S P96S V103E K114I",5
"lib2","SARS-CoV-2","CGTCCAAAAAGCCGAA",1,14.19,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K87E P96F W106T T140A",4
"lib2","SARS-CoV-2","CGTCCAAAATTCACAA",16,164.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12T S69L N107Y T201Y",4
"lib2","SARS-CoV-2","CGTCCAACTTCTTTAA",2,7.52,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N64F G101C P149N G172T",4
"lib2","SARS-CoV-2","CGTCCACACAACATGT",1,76.71,9.52,-1.32,0.04,2.91,1.08,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","CGTCCACACGAACTAG",5,0.51,NA,NA,NA,NA,NA,NA,"stop","L5H T85M A105R N120F E141* T148W",6
"lib2","SARS-CoV-2","CGTCCACTATCGACCA",1,13.42,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F167T V182G",2
"lib2","SARS-CoV-2","CGTCCAGAGTTACATT",7,62.75,8.08,-2.76,0.29,1.5,1.11,0.03,">1 nonsynonymous","G86S N120I S129I",3
"lib2","SARS-CoV-2","CGTCCAGCTCATCAAA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","L57G Q144T Q176*",3
"lib2","SARS-CoV-2","CGTCCATAGATACCTG",5,14.97,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","Y35K K56I D98Q V103T R127A",5
"lib2","SARS-CoV-2","CGTCCATCCGAAACCG",2,30.81,9.11,-1.72,0.12,2.3,1.12,0.01,">1 nonsynonymous","D97G S129Q P161G",3
"lib2","SARS-CoV-2","CGTCCATTAAAGAGTA",2,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I I104D",2
"lib2","SARS-CoV-2","CGTCCATTCTGAGAAG",5,88.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51S P96S I142S T148D",4
"lib2","SARS-CoV-2","CGTCCCAAATTTAAAG",5,76.56,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G86Y A145I",2
"lib2","SARS-CoV-2","CGTCCCAGCAAGCCCA",4,40.72,8.59,-2.24,0.13,1.91,1.1,0.01,">1 nonsynonymous","R25Q N110Y F156S",3
"lib2","SARS-CoV-2","CGTCCCATAAAAACGG",4,42.23,9.79,-1.05,0.11,2.22,1.06,0,">1 nonsynonymous","G51Y T148L",2
"lib2","SARS-CoV-2","CGTCCCATACTACCCA",4,37.67,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12D S19E S53M E141T",4
"lib2","SARS-CoV-2","CGTCCCGAATTCACCC",2,79.18,10.6,-0.23,0.03,2.95,1.01,0,">1 nonsynonymous","A33Y A42F D98S",3
"lib2","SARS-CoV-2","CGTCCCGACTGATCAA",7,121.17,10.8,-0.04,0.04,2.96,1.06,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","CGTCCCTGCCTAGAAG",4,60.23,8.18,-2.66,0.18,1.66,1.08,0.01,">1 nonsynonymous","S36R A89C F126G",3
"lib2","SARS-CoV-2","CGTCCCTTGACGTTAG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","T15* P54T G86* G101M T148Y G172W",6
"lib2","SARS-CoV-2","CGTCCGAAATCCAAAA",9,46.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K48S T63L K94A V173S",4
"lib2","SARS-CoV-2","CGTCCGACAAATACTA",6,94.45,10.8,-0.03,0.07,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCCGATCCCCATGT",18,182.74,10.84,0,0.03,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCCGGACCCCCATC",2,65.69,10.21,-0.63,0.05,2.64,1.03,0,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","CGTCCTAAAATTCACA",8,3.09,NA,NA,NA,NA,NA,NA,"stop","V20P I88P S147*",3
"lib2","SARS-CoV-2","CGTCCTAAATAGGGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* T85I S200M",3
"lib2","SARS-CoV-2","CGTCCTAACAAAGGAA",5,64.43,10.84,0.01,0.06,2.95,1.07,0,"1 nonsynonymous","T3Q",1
"lib2","SARS-CoV-2","CGTCCTAACCAACCAA",11,5.07,NA,NA,NA,NA,NA,NA,"stop","N30* T100N",2
"lib2","SARS-CoV-2","CGTCCTAGCCCAACAA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M K87V W106K T148I",4
"lib2","SARS-CoV-2","CGTCCTCAACCACTTT",1,36.64,9.44,-1.4,0.09,1.78,1.03,0,">1 nonsynonymous","I28Q Y35S S129R T201Y",4
"lib2","SARS-CoV-2","CGTCCTCAGCATACCC",1,88.26,9.89,-0.94,0.09,2.05,1.01,0,"1 nonsynonymous","S69G",1
"lib2","SARS-CoV-2","CGTCCTCCACGAGGAA",6,75.11,10.46,-0.37,0.05,2.95,1,0,">1 nonsynonymous","N13H A145S Y178H",3
"lib2","SARS-CoV-2","CGTCCTGACCCGGTCC",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44T C61L D68R V115K F134K",5
"lib2","SARS-CoV-2","CGTCGACAGCCATCAA",8,1.64,NA,NA,NA,NA,NA,NA,"stop","V37D V115* Y175V",3
"lib2","SARS-CoV-2","CGTCGACATCTCGACA",6,81.71,10.82,-0.01,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTCGACTAGTCCAGA",14,163.72,8.53,-2.31,0.1,2.6,1.03,0,">1 nonsynonymous","T3D C6R G152N N157D",4
"lib2","SARS-CoV-2","CGTCGAGCCAACGATT",9,51.41,8.63,-2.21,0.16,1.52,1.15,0.01,">1 nonsynonymous","Y91S E141C",2
"lib2","SARS-CoV-2","CGTCGATTTAGAAATT",1,48.2,9.48,-1.36,0.06,2.84,1.13,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","CGTCGCAGTACGCTAA",3,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E K94N C102V A190S",4
"lib2","SARS-CoV-2","CGTCGCCAATTCTATC",3,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R S113G N171C",3
"lib2","SARS-CoV-2","CGTCGCCAGTAATCTA",1,5.25,9.32,-1.52,0.38,1.79,1.01,0.02,"1 nonsynonymous","N92A",1
"lib2","SARS-CoV-2","CGTCGCCCACTCTAGA",6,58.56,10.77,-0.07,0.04,2.97,1.05,0,">1 nonsynonymous","R27E I138N",2
"lib2","SARS-CoV-2","CGTCGCCGATGACTTT",1,21.12,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K48L R179Y",2
"lib2","SARS-CoV-2","CGTCGCGTGTAAGATA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","CGTCGGCGAAAAGCTA",8,124.45,9.79,-1.04,0.08,2.31,1.09,0,">1 nonsynonymous","E10I S36I C61H",3
"lib2","SARS-CoV-2","CGTCGGGCTCACTGTT",10,59.73,9.39,-1.45,0.13,1.76,1.11,0.01,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","CGTCGTCAAATGAATT",1,25.25,10.24,-0.59,0.06,2.98,1.03,0,"1 nonsynonymous","P169A",1
"lib2","SARS-CoV-2","CGTCGTCAATAGTCAA",1,25.33,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","G51L L60G A81T P161R",4
"lib2","SARS-CoV-2","CGTCGTCACGCAGCAC",5,21.64,6,-4.84,1.75,3,1.1,0.01,">1 nonsynonymous","N64E G86R Y91D F160R S164D",5
"lib2","SARS-CoV-2","CGTCGTCGCTAAGAAC",3,45.17,9.25,-1.59,0.08,2.78,1.16,0,">1 nonsynonymous","L5V D59K F156C",3
"lib2","SARS-CoV-2","CGTCTAAACCAGTGAA",2,1.93,NA,NA,NA,NA,NA,NA,"stop","Y50I N110* G152V",3
"lib2","SARS-CoV-2","CGTCTAAACCTACTGA",1,23.24,6.99,-3.85,0.08,1.7,1.03,0,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","CGTCTAACATGAATTC",2,21.33,10.78,-0.06,0.04,2.97,1.05,0,">1 nonsynonymous","A33G S129K",2
"lib2","SARS-CoV-2","CGTCTAACTCAGGAAT",1,2838.76,9.32,-1.52,0.05,2.66,1.02,0,">1 nonsynonymous","R73M D97A L122D L188K",4
"lib2","SARS-CoV-2","CGTCTAATCAAAGCCA",10,67.73,6.11,-4.72,0.98,1.5,1.25,0.02,">1 nonsynonymous","T148Y R179I",2
"lib2","SARS-CoV-2","CGTCTAATCACGCGAA",7,72.96,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","A22T C61L Q176K",3
"lib2","SARS-CoV-2","CGTCTAATCATTTACC",11,38.97,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K48I A81F D98H C102S G116R",5
"lib2","SARS-CoV-2","CGTCTAATTTGGTACC",3,41.43,6,-4.84,2,3,1.21,0,">1 nonsynonymous","Y35K T63L P96L I142K",4
"lib2","SARS-CoV-2","CGTCTACACATGGTTA",4,36.5,8.45,-2.39,0.27,1.69,1.14,0.03,">1 nonsynonymous","Y66K S113G T170M",3
"lib2","SARS-CoV-2","CGTCTACAGGTGCACT",9,110.6,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D59E V65S Y123C P133T",4
"lib2","SARS-CoV-2","CGTCTATGAAAGAAAG",3,47.68,10.03,-0.8,0.09,2.49,1.01,0,"1 nonsynonymous","A14Y",1
"lib2","SARS-CoV-2","CGTCTATTCTTTAATA",6,163.63,10.28,-0.55,0.03,2.88,1.05,0,">1 nonsynonymous","V37C L60G D97L",3
"lib2","SARS-CoV-2","CGTCTCAACTCTATAA",4,30.44,10.63,-0.2,0.07,2.9,1.07,0,">1 nonsynonymous","A42T K132L",2
"lib2","SARS-CoV-2","CGTCTCAATCATTCAC",2,17,10.06,-0.77,0.19,2.7,1.15,0.02,">1 nonsynonymous","G74Q L162I",2
"lib2","SARS-CoV-2","CGTCTCAATGCCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83T G155A",2
"lib2","SARS-CoV-2","CGTCTCAGACTCTCCG",2,24.3,10.93,0.09,0.06,2.98,1.04,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","CGTCTCATGACCAAAA",4,19.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4G F99P",2
"lib2","SARS-CoV-2","CGTCTCCCCGGACTAG",2,28.86,6.41,-4.42,0.74,1.5,1.18,0.04,">1 nonsynonymous","K56N Y119M A145V P161T",4
"lib2","SARS-CoV-2","CGTCTCCCCTAAAGAA",6,115.9,10.81,-0.03,0.04,2.96,1.05,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","CGTCTCTAACTCCTCG",5,55.67,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4I A81Y T140W",3
"lib2","SARS-CoV-2","CGTCTCTAGGCCAATT",8,54.71,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F12N D75H G86M D90I G166R P191N",6
"lib2","SARS-CoV-2","CGTCTCTATTTTTTAA",2,36.68,7.26,-3.58,0.41,1.68,1.19,0.05,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","CGTCTCTGGATCAATC",2,514.68,8.79,-2.05,0.12,1.5,1.05,0.01,">1 nonsynonymous","R25N A190I",2
"lib2","SARS-CoV-2","CGTCTGAGGTCCTCCT",2,4.59,NA,NA,NA,NA,NA,NA,"stop","Y175* L183A",2
"lib2","SARS-CoV-2","CGTCTGTACGCGCCCG",9,2.68,NA,NA,NA,NA,NA,NA,"stop","P7* Y119W",2
"lib2","SARS-CoV-2","CGTCTGTTTCTGATAG",1,8.8,6.15,-4.69,2,1.5,1.3,0.06,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","CGTCTTAAAATTCGCT",2,23.95,10.86,0.03,0.05,2.85,1.17,0,">1 nonsynonymous","F8W N64G",2
"lib2","SARS-CoV-2","CGTCTTAATTCACAAC",6,87.9,9.47,-1.36,0.05,2.92,1.05,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","CGTCTTATAGGCATGA",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60D A81D",2
"lib2","SARS-CoV-2","CGTCTTATGTAAGTGA",2,25.6,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","T3N G9T N40C F62R D90Y W106V F156V",7
"lib2","SARS-CoV-2","CGTCTTCAGTACGGTT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","G9L L60W S113R F156S T201*",5
"lib2","SARS-CoV-2","CGTCTTCCAACTTACA",3,41.33,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A18V D112G",2
"lib2","SARS-CoV-2","CGTCTTCCACAAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15K S129V G155T L162*",4
"lib2","SARS-CoV-2","CGTCTTCCATGAATCA",6,3.07,NA,NA,NA,NA,NA,NA,"stop","V37G G86D V115* Y175Q",4
"lib2","SARS-CoV-2","CGTCTTCTCGATTTTC",2,13.57,9.23,-1.61,0.14,1.88,1.06,0.01,">1 nonsynonymous","Y66A A81C",2
"lib2","SARS-CoV-2","CGTCTTGCGTGACATT",6,0.74,NA,NA,NA,NA,NA,NA,"stop","S36* K56T Y159M A190D",4
"lib2","SARS-CoV-2","CGTCTTGTTAACCTTA",8,119.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T63P G155V F156Q Q176S",4
"lib2","SARS-CoV-2","CGTCTTTAGTACATTG",2,26.8,10,-0.84,0.12,2.48,1.02,0.01,">1 nonsynonymous","N64F L125I P133T",3
"lib2","SARS-CoV-2","CGTCTTTATCGGATAT",6,92.31,10.27,-0.56,0.03,2.9,1.06,0,">1 nonsynonymous","A14V V37L",2
"lib2","SARS-CoV-2","CGTCTTTCAGAAGTAC",26,120.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D34Y L95W N151K Q176K",4
"lib2","SARS-CoV-2","CGTCTTTGATTAGGTC",3,7.55,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C61R K87E A105N N171R",4
"lib2","SARS-CoV-2","CGTCTTTTCTTAAAGC",2,8.83,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","V11G L95C N110V G152K",4
"lib2","SARS-CoV-2","CGTGAAAAATGAAGAT",5,6.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I C61S G86W L95E S147T",5
"lib2","SARS-CoV-2","CGTGAAATTATTGTGA",1,40.18,10.26,-0.58,0.06,2.64,1.09,0,">1 nonsynonymous","D90N K94H L122A P149L",4
"lib2","SARS-CoV-2","CGTGAACGCTAGGGAT",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V P54R",2
"lib2","SARS-CoV-2","CGTGAATGCATTGAAA",3,28.04,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","W106C S129I E154V Y175A",4
"lib2","SARS-CoV-2","CGTGACAGACTAGACA",3,25.2,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A14F G86C",2
"lib2","SARS-CoV-2","CGTGACGCACTAGACT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","T100* L131D S147Y",3
"lib2","SARS-CoV-2","CGTGACTGAACTACAT",2,16.03,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F12S D112W",2
"lib2","SARS-CoV-2","CGTGAGCGAGAAGCAC",8,33.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5W F17L I28V K48S Y165M",5
"lib2","SARS-CoV-2","CGTGAGGATTCTTAAT",8,44.91,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","T63Y I88S E141T",3
"lib2","SARS-CoV-2","CGTGAGGTATATGTGG",18,150.35,9.93,-0.9,0.07,2.17,1.06,0,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","CGTGAGTTGTGGTACG",7,158.86,10.11,-0.73,0.04,2.92,1.07,0,">1 nonsynonymous","L60H K87G",2
"lib2","SARS-CoV-2","CGTGATAACTCATCCT",9,50.84,6.28,-4.56,0.71,1.5,1.12,0.03,">1 nonsynonymous","S19P D68M R73I P82L E141F",5
"lib2","SARS-CoV-2","CGTGATAATTGTCTGG",2,25.56,7.06,-3.78,0.31,1.5,1.18,0.03,">1 nonsynonymous","C102L F134T F156K",3
"lib2","SARS-CoV-2","CGTGATCCCGACCCAA",4,155.52,9.5,-1.33,0.06,2.72,1.1,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","CGTGATCTAAAATAAG",2,9.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D97R V103F S113L T170N",4
"lib2","SARS-CoV-2","CGTGATGAGTTCCAAT",2,7.49,NA,NA,NA,NA,NA,NA,"stop","I28* F47L F99C N118V",4
"lib2","SARS-CoV-2","CGTGATGCAAACTGCA",13,98.37,6.21,-4.63,0.51,1.5,1.21,0.01,">1 nonsynonymous","Q84L K87R P149S Y165L",4
"lib2","SARS-CoV-2","CGTGATGTAGAACAGA",8,122.61,10.89,0.06,0.05,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTGATTCATTACCAT",1,30.25,8.7,-2.14,0.13,1.98,1.11,0.01,">1 nonsynonymous","V32L S45N Q176L",3
"lib2","SARS-CoV-2","CGTGATTCGACAAATA",3,63.74,8.77,-2.07,0.16,1.81,1.08,0.02,">1 nonsynonymous","D90S Y121R",2
"lib2","SARS-CoV-2","CGTGATTCTACAACGG",4,7.78,NA,NA,NA,NA,NA,NA,"stop","N92* I138S",2
"lib2","SARS-CoV-2","CGTGATTCTACTTTAC",8,37.79,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C61N G74P A89T C102M G152I",5
"lib2","SARS-CoV-2","CGTGATTGCTAACGGA",6,1.92,NA,NA,NA,NA,NA,NA,"stop","F62E Y93S W106S Y143S V173* T201Q",6
"lib2","SARS-CoV-2","CGTGCACTACCCTCTT",1,49.91,9.34,-1.49,0.05,2.91,1.07,0,">1 nonsynonymous","G117A N130L",2
"lib2","SARS-CoV-2","CGTGCCGATCAATGCA",10,35.48,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F12S C61M I88V K94D T100N",5
"lib2","SARS-CoV-2","CGTGCCGTCCAAATGC",4,115.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10T T85N K128F P177F",4
"lib2","SARS-CoV-2","CGTGCTAACCGCTGCT",6,148.04,9.13,-1.7,0.03,2.9,1.12,0,">1 nonsynonymous","Y39S Y119M",2
"lib2","SARS-CoV-2","CGTGCTATGATAATTC",3,109.73,10.07,-0.77,0.08,2.63,1.03,0,">1 nonsynonymous","L5R I28V D59R K132L",4
"lib2","SARS-CoV-2","CGTGCTATTTATACGC",6,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87I Y123S G146T G155A",4
"lib2","SARS-CoV-2","CGTGCTCTGCATAACT",2,51.36,8.27,-2.56,0.09,2.79,1.11,0,">1 nonsynonymous","I2H A18E Y175S",3
"lib2","SARS-CoV-2","CGTGCTTTCGCCTGGC",1,23.65,10.87,0.04,0.08,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTGGAATAAAATCCA",4,17.65,6,-4.84,2,3,1.13,0.03,">1 nonsynonymous","T15L I80K V153E V173I",4
"lib2","SARS-CoV-2","CGTGGCTCGTAGCGCA",3,70.33,9.83,-1,0.09,2.24,1.08,0.01,">1 nonsynonymous","R27M F44C T140M",3
"lib2","SARS-CoV-2","CGTGGGACCACGTCAC",1,6.81,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","N4E P82H R127P F134L G174L",5
"lib2","SARS-CoV-2","CGTGGGGTCACTATAA",8,205.15,10.77,-0.06,0.04,2.92,1.09,0,">1 nonsynonymous","T55N C61T",2
"lib2","SARS-CoV-2","CGTGGTGGTATATCAG",5,76.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G83L F99V W106F Y119C I138Y V173L",6
"lib2","SARS-CoV-2","CGTGTACGAGCGCGAA",6,35.69,9.75,-1.08,0.08,2.06,1.09,0,">1 nonsynonymous","A14M A81V Q168F",3
"lib2","SARS-CoV-2","CGTTAAAAAACACAAA",8,3.65,NA,NA,NA,NA,NA,NA,"stop","A81* P82T S147V C150N",4
"lib2","SARS-CoV-2","CGTTAAAAAAGACTGG",9,148.33,10.7,-0.14,0.03,2.92,1.08,0,">1 nonsynonymous","K48L N120K",2
"lib2","SARS-CoV-2","CGTTAAAAACACTTCT",3,7.31,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T100W W106V G116K I138H F167G S200I",6
"lib2","SARS-CoV-2","CGTTAAAACGAGTTAA",5,2.03,NA,NA,NA,NA,NA,NA,"stop","W23L C31L K48I W106R F134W Y175K V181* H189L",8
"lib2","SARS-CoV-2","CGTTAAACAAACATCC",3,21.7,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Y50N C61A R179V T201R",4
"lib2","SARS-CoV-2","CGTTAAATAACGCAGT",3,21.35,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5K K26G S41F S108I T140R G166S K199S",7
"lib2","SARS-CoV-2","CGTTAAATAGGGATGG",4,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M C6A N13L D68N P169L K198E",6
"lib2","SARS-CoV-2","CGTTAAATGGCTAGTA",5,84.8,10.19,-0.65,0.09,2.68,1,0,"1 nonsynonymous","A81D",1
"lib2","SARS-CoV-2","CGTTAACAGACACTCG",2,66.36,8.5,-2.33,0.12,2.67,1.18,0.01,">1 nonsynonymous","T63Q G117K F156Y N171S",4
"lib2","SARS-CoV-2","CGTTAACAGCAGCAGA",4,0,NA,NA,NA,NA,NA,NA,"stop","C31N C61T G83C Q84* P96H S113G V173T",7
"lib2","SARS-CoV-2","CGTTAACATCAAAACA",2,10.77,9.8,-1.04,0.06,2.98,1.03,0,">1 nonsynonymous","T170M A190E",2
"lib2","SARS-CoV-2","CGTTAACATGGATCTG",8,123.12,10.62,-0.22,0.04,2.96,1.04,0,">1 nonsynonymous","A33L C61I",2
"lib2","SARS-CoV-2","CGTTAACCATAAATTT",2,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D F99V",2
"lib2","SARS-CoV-2","CGTTAACCCAAGGCAC",4,4.67,NA,NA,NA,NA,NA,NA,"stop","V37* C61H T85G I142L K199G",5
"lib2","SARS-CoV-2","CGTTAACCCTTCCAGA",5,73.04,10.35,-0.49,0.06,2.9,1.09,0,"1 nonsynonymous","E76M",1
"lib2","SARS-CoV-2","CGTTAACCGTAAGAGT",3,27.02,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","F12R V20M F99W",3
"lib2","SARS-CoV-2","CGTTAACCTTGTTCCG",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94F F185E",2
"lib2","SARS-CoV-2","CGTTAAGAAAATTAAA",5,67.81,10.62,-0.21,0.04,3,1.01,0,"1 nonsynonymous","V32G",1
"lib2","SARS-CoV-2","CGTTAAGAGCGCTATT",7,161.93,9.23,-1.6,0.03,2.92,1.09,0,">1 nonsynonymous","G166I L188R",2
"lib2","SARS-CoV-2","CGTTAAGTGAAAATCT",3,1.87,NA,NA,NA,NA,NA,NA,"stop","F156S Y175*",2
"lib2","SARS-CoV-2","CGTTAAGTTTACACAT",10,178.16,9.8,-1.04,0.06,2.5,1.1,0,">1 nonsynonymous","C6M R27S",2
"lib2","SARS-CoV-2","CGTTAATACATGCAAG",2,79.08,10.81,-0.02,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTAATACCCGGTGA",1,11.88,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","I28S C158F P191R",3
"lib2","SARS-CoV-2","CGTTAATAGAGGGGTC",1,5.49,7.21,-3.63,0.66,1.5,1.13,0.05,">1 nonsynonymous","P96M E141P",2
"lib2","SARS-CoV-2","CGTTAATATATCAACG",5,42.44,9.7,-1.13,0.09,2.28,1.05,0,">1 nonsynonymous","V52D Y123S N130P G196S",4
"lib2","SARS-CoV-2","CGTTAATCGTTCATAA",3,1.88,NA,NA,NA,NA,NA,NA,"stop","K56L N92I T100* A105M",4
"lib2","SARS-CoV-2","CGTTAATGAAAACAAT",11,2.05,NA,NA,NA,NA,NA,NA,"stop","R27W V37* F134S G146M",4
"lib2","SARS-CoV-2","CGTTACAAACATGATT",2,24.86,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","G86C F99S A105L",3
"lib2","SARS-CoV-2","CGTTACAAGATTTAAA",17,9.06,NA,NA,NA,NA,NA,NA,"stop","Y39V N92L Y123*",3
"lib2","SARS-CoV-2","CGTTACAATACCTAAT",2,60.81,10.77,-0.07,0.07,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTACAATATTCTTG",2,113.35,10.94,0.1,0.06,2.91,1.09,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","CGTTACACGTGTCAAC",1,21.38,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N4H F12I Q84G N107S Y121F G155Y F160L P169S",8
"lib2","SARS-CoV-2","CGTTACACTGAAAAAC",5,78.41,8.37,-2.46,0.1,2.27,1.12,0,">1 nonsynonymous","D34T L125Y",2
"lib2","SARS-CoV-2","CGTTACATTCCTAGAC",3,10.69,6.87,-3.97,0.4,1.5,1.14,0.05,">1 nonsynonymous","F8L N107T Y143M",3
"lib2","SARS-CoV-2","CGTTACCAAAGAAACC",5,136.83,10.47,-0.37,0.05,2.87,1.07,0,"1 nonsynonymous","W106F",1
"lib2","SARS-CoV-2","CGTTACCAGACATATT",2,21.77,10.85,0.01,0.08,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTACCCCAAGTGCG",3,59.85,6.03,-4.81,1.82,1.5,1.37,0.06,">1 nonsynonymous","L95G I138R P161S P177R",4
"lib2","SARS-CoV-2","CGTTACCTATGTGCAA",2,7.88,9.65,-1.18,0.5,1.5,1,0.08,">1 nonsynonymous","C61Y A89S D90R F185S",4
"lib2","SARS-CoV-2","CGTTACGACAAAGACG",12,238.2,10.79,-0.05,0.03,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTACGTACAACAGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M T15L N64K Y123P S184R",5
"lib2","SARS-CoV-2","CGTTACGTTGAGTCTA",6,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R V71L K114D E135T",4
"lib2","SARS-CoV-2","CGTTACTATAAGAATA",10,90.04,6,-4.84,2,1.5,1.21,0,">1 nonsynonymous","K56S I88E G155N",3
"lib2","SARS-CoV-2","CGTTACTCAGACAACC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23Q C49I N107T",3
"lib2","SARS-CoV-2","CGTTACTCTCACACCG",10,61.65,6.35,-4.49,0.73,1.5,1.26,0.04,">1 nonsynonymous","V20R K87A",2
"lib2","SARS-CoV-2","CGTTAGAAACCAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15P L60* T100L",3
"lib2","SARS-CoV-2","CGTTAGACGGATACAC",2,32.31,10.61,-0.23,0.04,2.9,1.11,0,">1 nonsynonymous","N151G E186K",2
"lib2","SARS-CoV-2","CGTTAGACTCTCACAA",1,11.17,10.14,-0.69,0.13,2.53,1.02,0.01,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","CGTTAGACTGTATATT",2,7.58,10.78,-0.05,0.08,2.92,1.06,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","CGTTAGATACACATCT",4,82.1,10.85,0.02,0.05,2.87,1.1,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","CGTTAGATTAATACAT",3,27.3,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","S19M N40S L95R Q163L",4
"lib2","SARS-CoV-2","CGTTAGCAACACGAAG",3,32.8,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","CGTTAGCTGACAATTG",1,80.28,10.78,-0.06,0.05,2.94,1.1,0,"1 nonsynonymous","S147F",1
"lib2","SARS-CoV-2","CGTTAGGAATACTGAT",1,72.28,10.52,-0.31,0.04,2.97,1.01,0,">1 nonsynonymous","S41V K132S",2
"lib2","SARS-CoV-2","CGTTAGGATATCAAGT",8,147.11,10.13,-0.7,0.04,2.83,1.03,0,">1 nonsynonymous","T15S Y91I T148V",3
"lib2","SARS-CoV-2","CGTTAGTAGATAACAC",1,131.04,10.84,0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTAGTCGCGACGCA",4,61.1,6,-4.84,0.78,1.5,1.17,0.01,">1 nonsynonymous","V11R D34G G83R D98F Y119R Y178D",6
"lib2","SARS-CoV-2","CGTTAGTGCATCAAAA",1,22.03,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","R16N C61F D112N Y159R",4
"lib2","SARS-CoV-2","CGTTATAAATTCCATA",2,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K S41I G86T K94V L125S G152T T170N",7
"lib2","SARS-CoV-2","CGTTATAACATCAAAG",9,106.05,10.09,-0.75,0.06,2.54,1.08,0,">1 nonsynonymous","P54S D97G E141Y",3
"lib2","SARS-CoV-2","CGTTATAACTGAAAAT",7,94.08,10.33,-0.51,0.04,2.91,1.09,0,"1 nonsynonymous","G155H",1
"lib2","SARS-CoV-2","CGTTATAACTTTCCCT",7,140.1,10.82,-0.01,0.05,2.94,1.08,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","CGTTATAATAATATAT",16,227.55,10.81,-0.03,0.06,2.87,1.12,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","CGTTATAATCCACACA",4,75.62,10.42,-0.42,0.04,2.89,1.04,0,">1 nonsynonymous","L57M S184Q",2
"lib2","SARS-CoV-2","CGTTATAATGACACGC",5,23.56,9.77,-1.07,0.14,1.94,1.08,0.02,">1 nonsynonymous","T15I R27M Y35M G152F",4
"lib2","SARS-CoV-2","CGTTATACTAATAAAG",4,71.74,6,-4.84,2,3,1.17,0,">1 nonsynonymous","R16Y G172V",2
"lib2","SARS-CoV-2","CGTTATCAAAATGATA",1,13.65,6,-4.84,2,3,1.23,0.03,">1 nonsynonymous","K26P Y35S D97L N157D T201G",5
"lib2","SARS-CoV-2","CGTTATCAAAGTGTTA",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K V182L",2
"lib2","SARS-CoV-2","CGTTATCAATATTAGC",5,90.3,10.72,-0.11,0.05,2.88,1.14,0,">1 nonsynonymous","T3Q C61R",2
"lib2","SARS-CoV-2","CGTTATCCTGCGGAAA",6,83.57,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C49V G86I P133V",3
"lib2","SARS-CoV-2","CGTTATCTGACGACCT",1,15.15,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W106D K128F T140Y",3
"lib2","SARS-CoV-2","CGTTATCTTAATAAGC",14,121.86,10.11,-0.73,0.04,2.72,1.05,0,">1 nonsynonymous","D98Q Y123Q",2
"lib2","SARS-CoV-2","CGTTATGAAAATCTGA",7,0.8,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib2","SARS-CoV-2","CGTTATGACAACCGGG",5,16.58,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","R78H P96I N107T K114H S129G",5
"lib2","SARS-CoV-2","CGTTATTAAGCGGGTA",6,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H Y93M T100Y D137M",4
"lib2","SARS-CoV-2","CGTTATTACCAGACCC",2,12.8,10.5,-0.33,0.05,2.89,1.12,0,">1 nonsynonymous","N120L Q163R",2
"lib2","SARS-CoV-2","CGTTATTCACGCACAT",2,33.82,6.9,-3.94,0.21,1.5,1.1,0.01,">1 nonsynonymous","K48L C61I C102L I142L",4
"lib2","SARS-CoV-2","CGTTATTCCCACTATC",20,366.69,10.25,-0.58,0.03,2.75,1.1,0,"1 nonsynonymous","R127S",1
"lib2","SARS-CoV-2","CGTTATTTGTCAAAAT",3,56.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19L S53E D59T Y143C C158V",5
"lib2","SARS-CoV-2","CGTTCAAATAAGATCA",17,263.3,10.85,0.02,0.05,2.93,1.05,0,"1 nonsynonymous","L5W",1
"lib2","SARS-CoV-2","CGTTCAAATACCCTAA",3,51.42,10.2,-0.64,0.09,2.6,1,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","CGTTCAACATATAATA",9,173.35,10.83,-0.01,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTCAACGGGTGCAT",1,62.66,10.95,0.12,0.05,2.94,1.06,0,">1 nonsynonymous","F134W S164K",2
"lib2","SARS-CoV-2","CGTTCAATTATCGAAC",4,89.59,10.73,-0.1,0.05,2.93,1.09,0,"1 nonsynonymous","F160D",1
"lib2","SARS-CoV-2","CGTTCACACCAAAGAA",5,56.13,10.86,0.02,0.08,2.88,1.14,0,">1 nonsynonymous","T85R L122M A190K",3
"lib2","SARS-CoV-2","CGTTCACACCTGTAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5T L60* Q163L K198G",4
"lib2","SARS-CoV-2","CGTTCACACTGCTCCC",2,25.99,9.93,-0.91,0.2,1.5,1,0.02,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","CGTTCACAGTATGAGG",1,9.27,10.91,0.08,0.11,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTCACTTTTCCTTT",2,4.75,NA,NA,NA,NA,NA,NA,"stop","V37* N107P C158D",3
"lib2","SARS-CoV-2","CGTTCAGGTAAAGGTC",2,24.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6I T46L P82A",3
"lib2","SARS-CoV-2","CGTTCAGGTTAGCATA",4,1.26,NA,NA,NA,NA,NA,NA,"stop","P7* L57K T85D V103Q N120R P133R T170I",7
"lib2","SARS-CoV-2","CGTTCATAATACAAAG",1,17.97,10.3,-0.53,0.1,2.76,1.03,0.01,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","CGTTCATTAAGGTAGG",8,31.44,6.18,-4.66,0.72,1.5,1.15,0.02,">1 nonsynonymous","Y35T P96L L122M",3
"lib2","SARS-CoV-2","CGTTCCCCAAAATATT",13,46.67,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N4P I88A L183F",3
"lib2","SARS-CoV-2","CGTTCCCCCGCAAAAC",1,97.38,10.52,-0.31,0.03,2.97,1.02,0,">1 nonsynonymous","I104A L125M",2
"lib2","SARS-CoV-2","CGTTCCCCGATATACC",4,79.33,10.39,-0.45,0.05,2.89,1.06,0,">1 nonsynonymous","E10V V37N",2
"lib2","SARS-CoV-2","CGTTCCCTAGGGAGCA",11,171.09,6,-4.84,1.56,1.5,1.13,0.01,">1 nonsynonymous","G83I G155T L162A V181T",4
"lib2","SARS-CoV-2","CGTTCGAATGCCATCA",6,82.43,9.13,-1.71,0.04,2.92,1.1,0,"1 nonsynonymous","N120P",1
"lib2","SARS-CoV-2","CGTTCGACAATAGTTC",8,166.16,10.72,-0.12,0.04,2.9,1.07,0,">1 nonsynonymous","L5S F44L Q168W",3
"lib2","SARS-CoV-2","CGTTCGAGTTACACAT",2,31.03,8.57,-2.27,0.16,3,1.03,0.01,">1 nonsynonymous","Y119H Q168L",2
"lib2","SARS-CoV-2","CGTTCGATCATAGCCG",9,3.07,NA,NA,NA,NA,NA,NA,"stop","R73K G86Y N92Q A105V N120* A145I",6
"lib2","SARS-CoV-2","CGTTCGCATTACTACA",6,32.56,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15K V77G P82G D90N R127M",5
"lib2","SARS-CoV-2","CGTTCGCCATTGCAGC",4,7.2,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L95I I104S D137S C158S",4
"lib2","SARS-CoV-2","CGTTCGGTAAGCGCGC",7,100.57,10.23,-0.61,0.03,2.91,1.03,0,">1 nonsynonymous","N30C S41R",2
"lib2","SARS-CoV-2","CGTTCGGTATTTCATC",2,28.96,10.7,-0.13,0.05,3,1.01,0,">1 nonsynonymous","N40H D59A",2
"lib2","SARS-CoV-2","CGTTCGTATGCGAATG",5,176.77,8.55,-2.29,0.1,2.91,1.06,0,">1 nonsynonymous","A42W T55R Y119S G174L",4
"lib2","SARS-CoV-2","CGTTCTAAGTCTTTAG",3,68.65,8.43,-2.4,0.14,1.96,1.04,0.01,">1 nonsynonymous","R16L R73C Y121F K198I",4
"lib2","SARS-CoV-2","CGTTCTAGGTCGTACA",3,61.9,10.56,-0.27,0.08,2.85,1.03,0,"1 nonsynonymous","I142H",1
"lib2","SARS-CoV-2","CGTTCTATTAAACCAT",4,91,10.07,-0.77,0.04,2.7,1.02,0,">1 nonsynonymous","E10L F44D",2
"lib2","SARS-CoV-2","CGTTCTATTACATTAA",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G P54Y T100H",3
"lib2","SARS-CoV-2","CGTTCTGAAATAAACT",2,21.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17E T46H Y91P L95K Y123P N130I",6
"lib2","SARS-CoV-2","CGTTCTGGCATCCAAA",3,0.76,NA,NA,NA,NA,NA,NA,"stop","K87* V153M N171D",3
"lib2","SARS-CoV-2","CGTTCTTTGCATGAAT",13,1.23,NA,NA,NA,NA,NA,NA,"stop","I2* V65L K132H G146W",4
"lib2","SARS-CoV-2","CGTTGAAACAGAATCG",8,0.86,NA,NA,NA,NA,NA,NA,"stop","L5* T15N R25K K87*",4
"lib2","SARS-CoV-2","CGTTGAAAGCCCACAT",6,92.1,10.73,-0.1,0.12,2.8,1.14,0.01,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","CGTTGAAATTGCAGTC",1,3.42,NA,NA,NA,NA,NA,NA,"stop","C49* L60F G116R T148F",4
"lib2","SARS-CoV-2","CGTTGAACACTATATG",10,101.18,10.87,0.03,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTGAACTATGCGTA",2,30.88,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S43G R124C C150Y",3
"lib2","SARS-CoV-2","CGTTGAATCTACACAG",11,122.11,10.85,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTGACATCATTGAG",2,185.57,8.83,-2.01,0.07,2.8,1.11,0,">1 nonsynonymous","L5R F126R N171I",3
"lib2","SARS-CoV-2","CGTTGACGACAGCAGG",3,52.21,10.23,-0.6,0.04,2.9,1.02,0,">1 nonsynonymous","I2K E10Y C61V",3
"lib2","SARS-CoV-2","CGTTGACTTGCGGCGT",13,83.29,9.99,-0.85,0.07,2.61,1.05,0,">1 nonsynonymous","S19K Y35L",2
"lib2","SARS-CoV-2","CGTTGAGCATTGGAAA",6,77.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40S D137L Y165T T201Y",4
"lib2","SARS-CoV-2","CGTTGAGGATATGACA",6,1.45,NA,NA,NA,NA,NA,NA,"stop","F12L W106E K132F Q168S S184*",5
"lib2","SARS-CoV-2","CGTTGAGTCACAGTTG",11,102.54,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6Y E10T G117R R127S R179W",5
"lib2","SARS-CoV-2","CGTTGAGTGAACGACG",3,55.38,10.41,-0.43,0.07,2.87,1.14,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","CGTTGATAGTTAGCGG",3,41.32,9.9,-0.94,0.09,2.74,1.04,0,">1 nonsynonymous","D59L T148P",2
"lib2","SARS-CoV-2","CGTTGATTTTACCGCG",3,46.57,10.25,-0.58,0.09,2.73,1.05,0,">1 nonsynonymous","F44G K48I",2
"lib2","SARS-CoV-2","CGTTGCAAGGAACGTG",9,124.72,10.22,-0.62,0.04,2.89,1.05,0,">1 nonsynonymous","L60A G116R S129V",3
"lib2","SARS-CoV-2","CGTTGCATGATAACTA",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L L60P Y93H G146W",4
"lib2","SARS-CoV-2","CGTTGCCAAGTCAAAC",3,154.52,10.78,-0.06,0.03,2.96,1.05,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","CGTTGCCCATAAACCC",10,30.42,6.55,-4.29,0.22,1.5,1.1,0.01,">1 nonsynonymous","G74T T148K P169S",3
"lib2","SARS-CoV-2","CGTTGCCCTGACTTAG",2,16.59,9.42,-1.42,0.09,2.92,1,0,">1 nonsynonymous","G9L L162F",2
"lib2","SARS-CoV-2","CGTTGCCGTCAGTACT",2,12.91,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","S19W L57N Y91Q V103T L122S",5
"lib2","SARS-CoV-2","CGTTGCGATGTTTTCT",4,32.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R27S P161H",2
"lib2","SARS-CoV-2","CGTTGCGCCCAAAAGT",11,2.64,NA,NA,NA,NA,NA,NA,"stop","A14* W106C P161C",3
"lib2","SARS-CoV-2","CGTTGCGGACCTAAGG",3,12.56,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I80F S113T E135R",3
"lib2","SARS-CoV-2","CGTTGGAATTAGGAAC",4,271.45,10.14,-0.69,0.03,2.93,1.09,0,">1 nonsynonymous","F156M A192V K198V",3
"lib2","SARS-CoV-2","CGTTGGATTTGACTGA",1,1.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","CGTTGGCACATCACTT",3,51.83,9.4,-1.44,0.05,2.64,1.04,0,">1 nonsynonymous","T100R I104M I142K",3
"lib2","SARS-CoV-2","CGTTGGCAGCCGGCCG",2,22.49,10.55,-0.28,0.06,2.95,1.03,0,">1 nonsynonymous","K56L D90M T201V",3
"lib2","SARS-CoV-2","CGTTGGCAGTACTTCA",26,453.15,10.6,-0.24,0.03,2.95,1.03,0,">1 nonsynonymous","T63Y T100R",2
"lib2","SARS-CoV-2","CGTTGGCGCGCATCAA",7,103.82,10.69,-0.14,0.03,2.96,1.03,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CGTTGTAAATACTCTA",1,33.44,10.1,-0.73,0.08,2.67,1.15,0,">1 nonsynonymous","N1H A14V",2
"lib2","SARS-CoV-2","CGTTGTAATCAACAGT",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55M N64K V77F",3
"lib2","SARS-CoV-2","CGTTGTACGACTACAA",11,121.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L95W F167N",2
"lib2","SARS-CoV-2","CGTTGTATCCCAACAC",7,50.1,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","K56C S69L T100R E154H",4
"lib2","SARS-CoV-2","CGTTGTATTTAAATGA",5,109.52,10.49,-0.34,0.04,2.89,1.06,0,">1 nonsynonymous","G9Q W23F S41A",3
"lib2","SARS-CoV-2","CGTTGTCATTGATTAT",16,148.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y50Q Y159S Q176K",3
"lib2","SARS-CoV-2","CGTTGTCCCGTCTGTC",3,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N C49N N92K G166M",4
"lib2","SARS-CoV-2","CGTTGTCGACGATGGT",1,56.7,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A105R Y119T Y175A",3
"lib2","SARS-CoV-2","CGTTGTCGTTAAAACT",5,98.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A14C G117N Y143L",3
"lib2","SARS-CoV-2","CGTTGTGATTCAGATA",4,96.28,10.46,-0.38,0.04,2.9,1.06,0,">1 nonsynonymous","V52T D59S N151T Q168A",4
"lib2","SARS-CoV-2","CGTTGTGCTTTCATTA",2,16.16,7.51,-3.32,0.42,1.5,1.15,0.04,">1 nonsynonymous","R27L C49H Q84K",3
"lib2","SARS-CoV-2","CGTTGTGGCACGAGTA",15,120.06,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25V A89K",2
"lib2","SARS-CoV-2","CGTTGTTCTTAACAAG",4,0,NA,NA,NA,NA,NA,NA,"stop","T3R F17S R73* F134S",4
"lib2","SARS-CoV-2","CGTTGTTTATGCTACG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14V L60M Q84*",3
"lib2","SARS-CoV-2","CGTTGTTTTCCATATG",4,60.5,10.72,-0.11,0.04,2.88,1.12,0,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","CGTTTAAATGAGGTAC",11,205.17,10.55,-0.29,0.04,2.92,1.06,0,">1 nonsynonymous","R78L D97E",2
"lib2","SARS-CoV-2","CGTTTAAATTGAAGGC",2,26.77,6,-4.84,1.54,1.5,1.06,0.02,">1 nonsynonymous","R27T L38P P96L",3
"lib2","SARS-CoV-2","CGTTTAAGCGAGAGAT",2,0.55,NA,NA,NA,NA,NA,NA,"stop","L57* L95E G117A P149S",4
"lib2","SARS-CoV-2","CGTTTAAGGGAACATG",3,69.25,9.5,-1.34,0.07,2.82,1.11,0,">1 nonsynonymous","Q79S K87F F156I",3
"lib2","SARS-CoV-2","CGTTTAAGTCAATGAG",6,12.73,7.32,-3.52,0.32,1.5,1.18,0.02,">1 nonsynonymous","T15W D137S",2
"lib2","SARS-CoV-2","CGTTTAATAAGACCTA",4,33.85,10.8,-0.03,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CGTTTAATGACCAAAA",5,78.98,10.75,-0.09,0.07,2.95,1.07,0,"1 nonsynonymous","L111H",1
"lib2","SARS-CoV-2","CGTTTACCCCGGGAAA",3,35.59,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S43M L60P N107Y R127L S139V",5
"lib2","SARS-CoV-2","CGTTTATAACAAACAA",2,65.15,10.27,-0.57,0.03,2.86,1.1,0,">1 nonsynonymous","G9Y Y123C",2
"lib2","SARS-CoV-2","CGTTTATATAGCAGAA",8,117.87,9.58,-1.26,0.07,2.37,1.05,0,">1 nonsynonymous","N13D C31T V77L",3
"lib2","SARS-CoV-2","CGTTTATGCATACAAT",10,162,9.95,-0.89,0.06,2.52,1.05,0,">1 nonsynonymous","N40I Y121F T201A",3
"lib2","SARS-CoV-2","CGTTTCAACTAAACCC",3,27.45,10.62,-0.22,0.06,2.99,1.02,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","CGTTTCAATGTTGAAG",4,50.23,10.4,-0.43,0.07,2.93,1.1,0,">1 nonsynonymous","N130R S139R F156I",3
"lib2","SARS-CoV-2","CGTTTCACACTAATTG",9,138.81,6.18,-4.66,0.85,1.5,1.16,0.03,">1 nonsynonymous","N13F F167N Y175L",3
"lib2","SARS-CoV-2","CGTTTCATGTACACAA",5,62.49,9.47,-1.37,0.09,1.9,1.07,0,">1 nonsynonymous","G51R T63P I104A",3
"lib2","SARS-CoV-2","CGTTTCCCCGATGCGT",6,7.07,NA,NA,NA,NA,NA,NA,"stop","L5* D59A P96I Y119T",4
"lib2","SARS-CoV-2","CGTTTCCGGTATAGAA",3,13.74,9.41,-1.43,0.15,2.78,1.07,0.01,">1 nonsynonymous","T100S N118T",2
"lib2","SARS-CoV-2","CGTTTCGAAGCTGCGC",7,91.34,8.46,-2.38,0.12,2.41,1.09,0.01,">1 nonsynonymous","T55A Y121L F134N G166L",4
"lib2","SARS-CoV-2","CGTTTCGATAGATAAT",7,46.7,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","L95N Y121C",2
"lib2","SARS-CoV-2","CGTTTCGCAAACGGCA",17,136.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T55M A89R L122V I142H Y165I",5
"lib2","SARS-CoV-2","CGTTTCGGGAAACGTT",9,119.82,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y119L P149C C158D",3
"lib2","SARS-CoV-2","CGTTTGAAAGATGAAA",3,106.98,9.65,-1.19,0.06,2.9,1.07,0,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","CGTTTGAAAGCACTTA",6,0.99,NA,NA,NA,NA,NA,NA,"stop","A14* Y35S K56I G83I F99C",5
"lib2","SARS-CoV-2","CGTTTGCAAGCTCAAA",5,13.28,6.1,-4.73,0.63,3,1.04,0.01,">1 nonsynonymous","C6N S29L V103H",3
"lib2","SARS-CoV-2","CGTTTGCACTGCACAT",3,49.56,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y91H S129G I142R P161G",4
"lib2","SARS-CoV-2","CGTTTGGAAGCAGCAC",13,100.93,7.81,-3.02,0.11,1.5,1.07,0,">1 nonsynonymous","F17L S129H T170P",3
"lib2","SARS-CoV-2","CGTTTGGTCTATTACA",2,30.1,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","K48S F62S F167R",3
"lib2","SARS-CoV-2","CGTTTGTAAGTTTTAT",32,279.96,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G86V Y121L T170G",3
"lib2","SARS-CoV-2","CGTTTGTGTTTGATAT",3,89.39,8.9,-1.93,0.09,2.3,1.1,0,">1 nonsynonymous","S129P P149F S164T G174R",4
"lib2","SARS-CoV-2","CGTTTTAAACGCAATT",2,12.34,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","N24T L57A D112W",3
"lib2","SARS-CoV-2","CGTTTTAACCTGGTGA",6,31.32,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I88K I138R",2
"lib2","SARS-CoV-2","CGTTTTAATCTTGACG",7,34.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S19F C49I F99L E141L",4
"lib2","SARS-CoV-2","CGTTTTACCTAAGTCC",2,33.33,10.37,-0.47,0.08,2.91,1.11,0,">1 nonsynonymous","T46M I142F",2
"lib2","SARS-CoV-2","CGTTTTACGCTTCCCT",14,131.93,10.76,-0.07,0.04,2.93,1.08,0,"1 nonsynonymous","F62M",1
"lib2","SARS-CoV-2","CGTTTTATAAAAGGAC",11,46.26,6.94,-3.9,0.29,1.5,1.12,0.02,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","CGTTTTATAACCTCTG",4,45.69,10.8,-0.03,0.06,2.96,1.06,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","CGTTTTCTGGCCCTCT",1,16.11,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K56S L131W",2
"lib2","SARS-CoV-2","CGTTTTGCCTTGAGCC",1,10.51,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V37P L95W",2
"lib2","SARS-CoV-2","CGTTTTTAGGAAACCT",2,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100G Y121T",2
"lib2","SARS-CoV-2","CGTTTTTGTTCTAGAT",9,48.84,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R78L T140P N157V T201M",4
"lib2","SARS-CoV-2","CTAAAAAAAAAGCGCA",3,18.41,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D112V Y123D K132V",3
"lib2","SARS-CoV-2","CTAAAAAAAAGTCTGA",4,19.87,10.84,0.01,0.09,2.78,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAAAAATATCACA",4,0.05,NA,NA,NA,NA,NA,NA,"stop","T15V A81E D98F D112L G174*",5
"lib2","SARS-CoV-2","CTAAAAAACTGTCTGC",7,168.37,9.27,-1.56,0.03,2.93,1.09,0,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","CTAAAAAAGATTGCAA",1,5.48,9.37,-1.46,0.26,2.89,1.11,0.01,">1 nonsynonymous","G9E L38F F44D K56G T170W S200C",6
"lib2","SARS-CoV-2","CTAAAAAAGTAACCCA",16,5.38,NA,NA,NA,NA,NA,NA,"stop","I28K S41W G146W T201*",4
"lib2","SARS-CoV-2","CTAAAAAATCAAAGCT",7,68.71,6,-4.84,2,3,1.23,0,">1 nonsynonymous","I88N H189P",2
"lib2","SARS-CoV-2","CTAAAAACAAACTATG",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S F47C F70S Q84W D98K A105K K128Y D137S",8
"lib2","SARS-CoV-2","CTAAAAACACCTGTAG",7,72.43,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","P96E L111T C158E Y165L C195Y",5
"lib2","SARS-CoV-2","CTAAAAACCAAATTCG",3,79.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R16L V103Y G166W",3
"lib2","SARS-CoV-2","CTAAAAACGAACACAC",4,12.65,6.25,-4.58,2,1.5,1.25,0.03,">1 nonsynonymous","L5Y A42G G101E",3
"lib2","SARS-CoV-2","CTAAAAACGAAGTACC",4,24.98,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","G86P",1
"lib2","SARS-CoV-2","CTAAAAACGTGGTCCA",11,83.95,8.68,-2.16,0.05,2.17,1.04,0,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","CTAAAAAGCGCCGTTA",4,49.31,9.14,-1.7,0.14,2.06,1.11,0.01,">1 nonsynonymous","F44T N107K",2
"lib2","SARS-CoV-2","CTAAAAAGTGTAGGCC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAAATAAGTCAGG",1,28.27,10.33,-0.5,0.07,2.81,1.04,0,">1 nonsynonymous","P7H N120M E154L",3
"lib2","SARS-CoV-2","CTAAAAATAATAACAA",1,6.51,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C61A G83P A89F P96N G146N T201M",6
"lib2","SARS-CoV-2","CTAAAAATACAACACG",1,10.65,9.13,-1.71,0.12,3,1,0.01,">1 nonsynonymous","N120P E141S A190S",3
"lib2","SARS-CoV-2","CTAAAAATACGGGGCC",12,8.02,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","CTAAAAATAGACGCAA",2,37.61,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","F44H S53H K87N F99V G152S",5
"lib2","SARS-CoV-2","CTAAAAATATAAGAAA",10,16.27,7.61,-3.23,0.43,1.5,1.04,0.06,">1 nonsynonymous","G101T S129T",2
"lib2","SARS-CoV-2","CTAAAAATCAATATCA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43V G101L Y119G L162H",4
"lib2","SARS-CoV-2","CTAAAAATCAATTGGT",9,76.28,10.52,-0.31,0.04,2.89,1.09,0,">1 nonsynonymous","T148R G155R",2
"lib2","SARS-CoV-2","CTAAAAATCTAGAGAA",2,48.74,8.61,-2.23,0.12,2.73,1.04,0.01,">1 nonsynonymous","I104M T140I I142E T201S",4
"lib2","SARS-CoV-2","CTAAAAATGCTCACCA",2,29.5,9.24,-1.6,0.12,2.46,1.08,0.01,">1 nonsynonymous","Y35T A67L L111S",3
"lib2","SARS-CoV-2","CTAAAAATGGCGAGGC",2,60.05,10.16,-0.68,0.06,2.83,1.07,0,">1 nonsynonymous","C6R Y39S L122R T201V",4
"lib2","SARS-CoV-2","CTAAAAATTAACCACA",7,103.66,10.64,-0.2,0.04,2.96,1.02,0,">1 nonsynonymous","D90S D97N T201Q",3
"lib2","SARS-CoV-2","CTAAAAATTAATCTTG",5,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y C49D T63C K87N",4
"lib2","SARS-CoV-2","CTAAAAATTCTAGGAA",2,17.54,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13C R73A W106C Y119T",4
"lib2","SARS-CoV-2","CTAAAACAACCTTTAT",1,15.8,10.95,0.11,0.07,2.76,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAACAAGAACAAT",2,46.76,8.84,-2,0.09,2.91,1.03,0,">1 nonsynonymous","Y119L P169M",2
"lib2","SARS-CoV-2","CTAAAACACTTATCAG",16,159.24,9.44,-1.4,0.03,2.82,1.07,0,"1 nonsynonymous","G117N",1
"lib2","SARS-CoV-2","CTAAAACACTTTAATT",18,253.94,9.81,-1.02,0.05,2.6,1.04,0,">1 nonsynonymous","I2Y S53R L60A Y123A",4
"lib2","SARS-CoV-2","CTAAAACAGAAGAATG",8,45.32,6.21,-4.63,1.03,1.5,1.3,0.02,">1 nonsynonymous","T3H F17L W23S S43T F99L",5
"lib2","SARS-CoV-2","CTAAAACAGACGACCT",1,4.01,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAACATCCTGATG",3,84.83,9.25,-1.58,0.04,2.92,1.12,0,"1 nonsynonymous","Y119I",1
"lib2","SARS-CoV-2","CTAAAACATGTATCAC",2,43.43,10.7,-0.13,0.06,2.94,1.08,0,">1 nonsynonymous","N1L K199S",2
"lib2","SARS-CoV-2","CTAAAACATTTATATA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","G86* S113R P149Q",3
"lib2","SARS-CoV-2","CTAAAACCAAAAACTC",7,48.39,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I104R Y119T",2
"lib2","SARS-CoV-2","CTAAAACCAGACTATA",4,9.22,6,-4.84,1.4,3,1.27,0.03,">1 nonsynonymous","E10R C31K F99M Y143R C150V L183N",6
"lib2","SARS-CoV-2","CTAAAACCATTTACCG",1,50.22,10.83,-0.01,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAACCCACCGCTA",19,32.93,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S41K C61G F99W R127H S139R",5
"lib2","SARS-CoV-2","CTAAAACCCAGGCTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3L I28* A42C D59A Y91S G155Y",6
"lib2","SARS-CoV-2","CTAAAACCTAACCCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83N S129*",2
"lib2","SARS-CoV-2","CTAAAACCTCAATATC",1,5.2,11.04,0.21,0.08,3,1.03,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","CTAAAACGAAAAGGTA",3,34.14,10.78,-0.06,0.06,2.98,1.06,0,">1 nonsynonymous","I2T A42G",2
"lib2","SARS-CoV-2","CTAAAACGAAAATAAG",7,72.19,8.17,-2.66,0.15,2.76,1,0.01,">1 nonsynonymous","V37Q G146I V153S K199T",4
"lib2","SARS-CoV-2","CTAAAACGACGATCAT",2,24.55,9.94,-0.89,0.12,1.97,1.03,0.01,">1 nonsynonymous","S41Y S69G",2
"lib2","SARS-CoV-2","CTAAAACGATAAAGAG",5,96.28,10.87,0.03,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAACTAAAGACAG",1,15.46,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6P Y35C E141Y G155W",4
"lib2","SARS-CoV-2","CTAAAACTGAATCACA",9,61.53,6.72,-4.12,0.39,1.5,1.19,0.02,">1 nonsynonymous","N64S V103R Y119V Q163M S200L",5
"lib2","SARS-CoV-2","CTAAAAGAAGATTATA",14,0.71,NA,NA,NA,NA,NA,NA,"stop","L5* R16Y R73M G152*",4
"lib2","SARS-CoV-2","CTAAAAGAATAAGTCC",1,23.81,7.94,-2.9,0.32,2.44,1.18,0.04,">1 nonsynonymous","N157Y S200L",2
"lib2","SARS-CoV-2","CTAAAAGATTGAATTA",1,7.32,6.72,-4.11,0.59,1.5,1.18,0.05,">1 nonsynonymous","A14D P96E F156N",3
"lib2","SARS-CoV-2","CTAAAAGCCAAATCAA",14,113.86,10.77,-0.07,0.03,2.97,1.05,0,">1 nonsynonymous","T3L N30D",2
"lib2","SARS-CoV-2","CTAAAAGCCACACCAA",1,25.63,8.45,-2.38,0.16,1.72,1.04,0.01,">1 nonsynonymous","G86Y V153R",2
"lib2","SARS-CoV-2","CTAAAAGTAAAGTTAA",2,21.37,8.46,-2.38,0.23,1.64,1.14,0.02,">1 nonsynonymous","C6S V52Q",2
"lib2","SARS-CoV-2","CTAAAAGTTTCAAACC",4,116.41,10.52,-0.32,0.04,2.92,1.07,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","CTAAAATAAAATACAC",1,9.72,9.48,-1.35,0.28,2.18,1.13,0.02,">1 nonsynonymous","Y35M K94S K128Y L188T",4
"lib2","SARS-CoV-2","CTAAAATAAATTTTTC",5,99.31,10.49,-0.35,0.05,2.91,1.08,0,">1 nonsynonymous","D97S L122G E141A Y175F",4
"lib2","SARS-CoV-2","CTAAAATAACAACGAA",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CTAAAATAAGACTTTT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151I L188M",2
"lib2","SARS-CoV-2","CTAAAATAAGAGGTCC",7,16.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63G W106K R124K P149F",4
"lib2","SARS-CoV-2","CTAAAATAATAGAGCA",5,77.97,10.84,0.01,0.05,2.9,1.09,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","CTAAAATACGCACCTA",2,15.99,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F70T D97Y",2
"lib2","SARS-CoV-2","CTAAAATACGTCAGGG",4,41.37,9.3,-1.54,0.09,1.98,1.14,0.01,">1 nonsynonymous","V37T K56Q N92A",3
"lib2","SARS-CoV-2","CTAAAATACTACAGAA",1,16.58,10.84,0,0.1,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAATGAAGCATAT",2,12.85,9.33,-1.51,0.16,1.75,1.07,0.02,">1 nonsynonymous","N24S F44S K56E R136F",4
"lib2","SARS-CoV-2","CTAAAATGAATTATAA",2,12.27,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C6D R78S Y123M C150L",4
"lib2","SARS-CoV-2","CTAAAATGATTAATAA",5,61.59,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35V Y50D K56H F134I T193I",5
"lib2","SARS-CoV-2","CTAAAATGGGGAAAAA",1,26.17,10.78,-0.05,0.07,2.8,1.21,0,"1 nonsynonymous","K198E",1
"lib2","SARS-CoV-2","CTAAAATTAAAATAGC",1,2.51,NA,NA,NA,NA,NA,NA,"stop","K87* P96R G116L",3
"lib2","SARS-CoV-2","CTAAAATTACAAGCCA",7,0.71,NA,NA,NA,NA,NA,NA,"stop","F17K V32* A89* A105W T140A",5
"lib2","SARS-CoV-2","CTAAAATTACGGTAAT",1,15.48,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","G101P P197I",2
"lib2","SARS-CoV-2","CTAAAATTGGCTGACA",6,183.32,10.84,0,0.05,2.95,1.06,0,"1 nonsynonymous","T148M",1
"lib2","SARS-CoV-2","CTAAAATTTATTCTGG",14,2.36,NA,NA,NA,NA,NA,NA,"stop","A14* C61S G86I",3
"lib2","SARS-CoV-2","CTAAACAAAGTTTGGA",4,23.57,8.94,-1.89,0.18,2.32,1.21,0.01,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","CTAAACAACTTCCTCT",6,42.85,10.01,-0.83,0.06,2.36,1.01,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","CTAAACAAGACTGATG",14,166.16,10.64,-0.19,0.02,2.94,1.04,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CTAAACAATACTGCAA",3,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47G V77E D97F",3
"lib2","SARS-CoV-2","CTAAACAATCCACTGA",1,18.76,7.16,-3.68,0.35,1.5,1.11,0.04,">1 nonsynonymous","R127M S164Y",2
"lib2","SARS-CoV-2","CTAAACACCTGAGAAC",5,38.26,7.07,-3.76,0.37,1.5,1.12,0.02,">1 nonsynonymous","G83E N107A E141W G174P",4
"lib2","SARS-CoV-2","CTAAACAGCTTGCTAA",11,294.41,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1E V37R K56N Y165R Q176K",5
"lib2","SARS-CoV-2","CTAAACAGTAGAACTG",3,10.77,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C31F K48A I104R",3
"lib2","SARS-CoV-2","CTAAACAGTCAACGAT",3,57.13,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","F167P",1
"lib2","SARS-CoV-2","CTAAACAGTCGCGCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* Y39L N118D",3
"lib2","SARS-CoV-2","CTAAACAGTGAAACTG",3,24.05,10.51,-0.33,0.07,2.9,1.06,0,">1 nonsynonymous","T140D P149R",2
"lib2","SARS-CoV-2","CTAAACATAAAGTACT",2,0.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","CTAAACATAACAAATC",9,45.55,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P82S A89L N120M S139Q F167Y",5
"lib2","SARS-CoV-2","CTAAACATTGCAAGCA",10,282.07,10.7,-0.14,0.03,2.91,1.08,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","CTAAACATTTATTGAC",1,1.1,NA,NA,NA,NA,NA,NA,"stop","K48E N58S K128L F134* P177G",5
"lib2","SARS-CoV-2","CTAAACCACATATACG",11,137.95,10.81,-0.02,0.05,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAAACCACGCAGTGA",14,70.48,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F12S C158E",2
"lib2","SARS-CoV-2","CTAAACCACGGAACAC",1,8.95,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N24R C31Q D137S T148M",4
"lib2","SARS-CoV-2","CTAAACCATAAAAATA",3,12.09,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R16L V37T D97R N109T G146V",5
"lib2","SARS-CoV-2","CTAAACCATATCAGAT",3,47.23,10.48,-0.35,0.07,2.93,1.08,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","CTAAACCATGTCAGCA",6,2.89,NA,NA,NA,NA,NA,NA,"stop","K48* F70I G83I E141V",4
"lib2","SARS-CoV-2","CTAAACCATTTCAAAG",8,91.83,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R25S D34R A42D V77A N92V L122D",6
"lib2","SARS-CoV-2","CTAAACCCATACCAAG",6,28.81,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","S19P C49G C158R",3
"lib2","SARS-CoV-2","CTAAACCGACGATAGG",1,0.31,NA,NA,NA,NA,NA,NA,"stop","K56M N92L D97G A105* Y143S",5
"lib2","SARS-CoV-2","CTAAACCGGGTCCCAT",8,119.36,8.89,-1.94,0.04,2.78,1.1,0,">1 nonsynonymous","N107D G174D",2
"lib2","SARS-CoV-2","CTAAACCTAAGTACGA",10,156.87,10.76,-0.07,0.06,2.81,1.19,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","CTAAACCTTTCTAAGG",4,36.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A22L P54L Q79P A89C K128M E154R",6
"lib2","SARS-CoV-2","CTAAACGATTATTTAT",2,39.29,8.9,-1.94,0.1,2.72,1.03,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","CTAAACGCCCCGGTCC",5,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S R73T Q79L S139Y",4
"lib2","SARS-CoV-2","CTAAACGCGTCCAAGT",3,24.09,10.78,-0.06,0.06,2.82,1.22,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","CTAAACGCTAAGCATA",8,138.5,10.07,-0.77,0.04,2.85,1.06,0,">1 nonsynonymous","K128F P169S",2
"lib2","SARS-CoV-2","CTAAACGGACTTAAGG",6,0.35,NA,NA,NA,NA,NA,NA,"stop","L122M Y175P E186*",3
"lib2","SARS-CoV-2","CTAAACGGAGTAGTTT",5,72.06,8.66,-2.17,0.13,2.77,1.05,0.01,"1 nonsynonymous","S113R",1
"lib2","SARS-CoV-2","CTAAACGTACACAGCA",4,36.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N107W Q144D",2
"lib2","SARS-CoV-2","CTAAACGTACATAGAA",9,17.73,9.89,-0.94,0.1,1.97,1.04,0,">1 nonsynonymous","T15N T55L W106K",3
"lib2","SARS-CoV-2","CTAAACGTATAATCTA",1,13.89,10.29,-0.54,0.08,3,1.01,0,">1 nonsynonymous","C6F P149S C195S",3
"lib2","SARS-CoV-2","CTAAACGTGTTAAAAT",12,100.35,9.94,-0.89,0.09,2.22,1.03,0,">1 nonsynonymous","V103T K128P",2
"lib2","SARS-CoV-2","CTAAACTACAATATTC",2,10.48,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","C49T K56W V77M Q168I K198N",5
"lib2","SARS-CoV-2","CTAAACTACCTAATAT",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R V65Q L122K",3
"lib2","SARS-CoV-2","CTAAACTATATGATAT",13,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G V65S C102N V182F",4
"lib2","SARS-CoV-2","CTAAACTCACACCGAC",2,43.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D68F N107L",2
"lib2","SARS-CoV-2","CTAAACTCACATAATT",9,59.39,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23P G101A S113R",3
"lib2","SARS-CoV-2","CTAAACTCGGGTGCCT",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T S43P D98K V103T L131M",5
"lib2","SARS-CoV-2","CTAAACTGACCGTATT",1,20.68,8.94,-1.89,0.1,2.86,1.09,0,"1 nonsynonymous","G117D",1
"lib2","SARS-CoV-2","CTAAACTGAGTTCTCT",1,8.5,6,-4.84,0.86,3,1.02,0,">1 nonsynonymous","G86L N130L G155A G174K",4
"lib2","SARS-CoV-2","CTAAACTGCTGGACTA",5,45.87,10.67,-0.17,0.05,2.9,1.11,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","CTAAACTGTAAGCTTT",14,122.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R73A A89I K128R E135M",4
"lib2","SARS-CoV-2","CTAAACTTAATTATAA",1,7.38,10.81,-0.03,0.07,2.81,1.22,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","CTAAACTTAATTCTTT",5,121.58,10.1,-0.73,0.05,2.58,1.01,0,">1 nonsynonymous","T63P N64L N118Y N171T",4
"lib2","SARS-CoV-2","CTAAACTTAGGTAGTG",6,109.94,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y39P T140Q F167G",3
"lib2","SARS-CoV-2","CTAAACTTCTTGGTTA",3,137.33,7.69,-3.15,0.16,1.5,1.12,0.01,">1 nonsynonymous","V77T L125R P133E",3
"lib2","SARS-CoV-2","CTAAACTTGAAACCGT",6,0.7,NA,NA,NA,NA,NA,NA,"stop","N64M D98* S184F",3
"lib2","SARS-CoV-2","CTAAACTTGGTACGCT",16,68.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56Y D112F Y119W L131V L183Y",5
"lib2","SARS-CoV-2","CTAAACTTTATCACAC",1,26.89,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V37E L131E S139C",3
"lib2","SARS-CoV-2","CTAAACTTTTAAACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15S A42L Y121*",3
"lib2","SARS-CoV-2","CTAAAGAAAATCGAGG",3,0.14,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","CTAAAGAACTATCTTA",3,162.72,7.2,-3.64,0.21,1.73,1.1,0.01,">1 nonsynonymous","L5N Y175I",2
"lib2","SARS-CoV-2","CTAAAGAAGAAAGAAA",11,265.95,10.85,0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAGAAGTACATTG",8,126.91,10.83,0,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAGAATTCATGCT",13,62.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C61I G101W",2
"lib2","SARS-CoV-2","CTAAAGAATTGATCTT",2,20.24,8.28,-2.55,0.2,1.6,1.19,0.03,">1 nonsynonymous","F8H F12V N40S T201L",4
"lib2","SARS-CoV-2","CTAAAGACAACTAATT",3,37.63,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3Q F12D K56N Q84F D137S T148L Y178L A190N",8
"lib2","SARS-CoV-2","CTAAAGACGTCTGTTC",1,38.1,10.73,-0.11,0.07,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAGACTTGAGTCC",5,23.56,8.73,-2.11,0.21,1.5,1,0.03,">1 nonsynonymous","V11P N107G S129K",3
"lib2","SARS-CoV-2","CTAAAGAGCCTTGTTA",6,20.59,9.28,-1.55,0.37,1.5,1,0.07,">1 nonsynonymous","W106K P133Y",2
"lib2","SARS-CoV-2","CTAAAGATACTCATTC",3,44.76,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F12E Y39M L57G N92Q D112T G166L",6
"lib2","SARS-CoV-2","CTAAAGATAGAATTTT",6,52.14,6,-4.84,2,1.82,1.1,0,">1 nonsynonymous","S41T T55K K94N V103L Y123N P149D",6
"lib2","SARS-CoV-2","CTAAAGATCCTTCGGT",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132M Y143V",2
"lib2","SARS-CoV-2","CTAAAGCAAAATTGCA",3,35.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10L G172W",2
"lib2","SARS-CoV-2","CTAAAGCAATTCGAGT",9,81.65,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V71L N120H G172Q",3
"lib2","SARS-CoV-2","CTAAAGCAGCACCACC",8,3.65,NA,NA,NA,NA,NA,NA,"stop","T3S D112* N171K",3
"lib2","SARS-CoV-2","CTAAAGCAGGGCTTGG",5,5.37,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L5I T15K P54I L95S S129L S139D Q144A G152S",8
"lib2","SARS-CoV-2","CTAAAGCGGACATACC",4,19.69,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","V37G D68Q T148C",3
"lib2","SARS-CoV-2","CTAAAGCGGTTTGGCG",3,66.76,9.52,-1.31,0.25,1.54,1.13,0.03,">1 nonsynonymous","I28V A89I N110M",3
"lib2","SARS-CoV-2","CTAAAGCTGAAAAGCA",7,28.57,6.44,-4.4,0.72,1.5,1.13,0.04,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","CTAAAGCTGTTAAATC",8,93.44,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","G172I",1
"lib2","SARS-CoV-2","CTAAAGGCATGAAAGG",2,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106P L122I R179H",3
"lib2","SARS-CoV-2","CTAAAGGCCATCTACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T K56T P82A K94M L95D G101M L122K T201A",8
"lib2","SARS-CoV-2","CTAAAGGGAAGACTCT",12,154.44,10.68,-0.15,0.02,2.92,1.08,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","CTAAAGGGTTCGTCCC",4,65.69,9.65,-1.18,0.05,2.9,1.07,0,">1 nonsynonymous","K56S Y143V",2
"lib2","SARS-CoV-2","CTAAAGGTACGACACT",2,15.84,10.64,-0.19,0.07,2.9,1.09,0,">1 nonsynonymous","K26R G83M V153H Q163R",4
"lib2","SARS-CoV-2","CTAAAGGTTAAGCCCA",20,173.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K26F G101L Y178E",3
"lib2","SARS-CoV-2","CTAAAGGTTGGCATCT",3,61.38,10.79,-0.04,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAAGTCAATTAACG",13,144.99,8.41,-2.42,0.1,2.11,1.1,0,">1 nonsynonymous","Y91H N109D K199Y",3
"lib2","SARS-CoV-2","CTAAAGTCAGCTTACT",1,9.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8R P96L R136C",3
"lib2","SARS-CoV-2","CTAAAGTCATAGTCGC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","G51S F70I S139C G146L K198*",5
"lib2","SARS-CoV-2","CTAAAGTCGTATCACC",3,12.48,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N13D D112W Q163G A190D",4
"lib2","SARS-CoV-2","CTAAAGTCTTTCCGTA",4,23.65,9.07,-1.77,0.32,1.64,1.15,0.04,">1 nonsynonymous","V37R C49L C61Y",3
"lib2","SARS-CoV-2","CTAAAGTGATGAAAAT",3,6.51,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","P7F V20R S41I Y50L C61T G152K",6
"lib2","SARS-CoV-2","CTAAAGTGTTTGAATC",2,39.77,10.42,-0.41,0.08,2.86,1.1,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","CTAAAGTTACGTTCCG",3,7.55,8.33,-2.5,0.16,1.67,1,0.01,">1 nonsynonymous","D112L E141Y",2
"lib2","SARS-CoV-2","CTAAATAACAATCAAT",1,1.47,NA,NA,NA,NA,NA,NA,"stop","L5* Y35P V77I G86S E141R T170K",6
"lib2","SARS-CoV-2","CTAAATAATAATAAAA",1,5.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P G101R Y119T F167V",4
"lib2","SARS-CoV-2","CTAAATACATATAACT",2,99.67,10.25,-0.58,0.02,2.94,1.05,0,"1 nonsynonymous","N171C",1
"lib2","SARS-CoV-2","CTAAATACCAGAATCG",1,6.08,8.42,-2.41,0.16,2.92,1,0.01,">1 nonsynonymous","Y143S T148S",2
"lib2","SARS-CoV-2","CTAAATACCGAGTTGT",3,18.08,7.76,-3.08,0.32,1.5,1,0.07,">1 nonsynonymous","W23L K87M F99S N130D G152N",5
"lib2","SARS-CoV-2","CTAAATACTGAAGCCC",6,1.86,NA,NA,NA,NA,NA,NA,"stop","R25* D98E I142G",3
"lib2","SARS-CoV-2","CTAAATAGGGATGAAG",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19M D90Y D112L",3
"lib2","SARS-CoV-2","CTAAATATAAAGACTA",15,267.56,10.83,0,0.04,2.97,1.05,0,"1 nonsynonymous","K198W",1
"lib2","SARS-CoV-2","CTAAATATAGTACTTA",10,5.92,NA,NA,NA,NA,NA,NA,"stop","S19E V52Y L57* A81R K87G",5
"lib2","SARS-CoV-2","CTAAATATCTGTGAAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","N40R G83V G101F G116* Q144S Y165F",6
"lib2","SARS-CoV-2","CTAAATATGCTTCGAC",4,28.92,8.26,-2.57,0.46,1.5,1,0.07,">1 nonsynonymous","C61P N107F E141K",3
"lib2","SARS-CoV-2","CTAAATATTAGTACAC",9,29.85,6,-4.84,2,3,1.06,0,">1 nonsynonymous","T100N F134P V182T",3
"lib2","SARS-CoV-2","CTAAATATTCTTGCTA",5,8.58,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","N13S C31M P82H P149I",4
"lib2","SARS-CoV-2","CTAAATATTTTTGGTG",7,125.19,6,-4.84,0.77,1.5,1.14,0,">1 nonsynonymous","L5T A14L I80R E135T Y178T",5
"lib2","SARS-CoV-2","CTAAATCAAAACGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","L57R G74* T100C V115L S139A",5
"lib2","SARS-CoV-2","CTAAATCACTTTAAAT",14,1.48,NA,NA,NA,NA,NA,NA,"stop","R16Y I28* G101V",3
"lib2","SARS-CoV-2","CTAAATCAGAACAATA",3,26.47,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37D C49S D90V Y119N N157C",5
"lib2","SARS-CoV-2","CTAAATCAGAGATACG",13,103.15,10.69,-0.15,0.05,2.92,1.08,0,"1 nonsynonymous","E135D",1
"lib2","SARS-CoV-2","CTAAATCATACGATGA",1,14.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I104K S139G",2
"lib2","SARS-CoV-2","CTAAATCATCCGGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6N G51C C61* D97R S113F F185S",6
"lib2","SARS-CoV-2","CTAAATCATTGCTATG",1,8.99,8.37,-2.47,0.08,2,1,0,">1 nonsynonymous","K56Y D90S R136L F156A",4
"lib2","SARS-CoV-2","CTAAATCCTACTTCCC",1,9.58,10.58,-0.26,0.14,2.91,1.12,0.01,">1 nonsynonymous","G155S V173F",2
"lib2","SARS-CoV-2","CTAAATCCTGAACACA",3,32.74,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","P7V E76R P133W",3
"lib2","SARS-CoV-2","CTAAATCGGCTCCCGG",4,18.81,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","R27F D34Y N92V P149T G155A",5
"lib2","SARS-CoV-2","CTAAATCTAAACGAAA",1,1.23,NA,NA,NA,NA,NA,NA,"stop","T3V S43I T55G T201*",4
"lib2","SARS-CoV-2","CTAAATCTACTGAACT",2,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106L G146Y",2
"lib2","SARS-CoV-2","CTAAATCTATAGGCCA",1,243.89,10.69,-0.15,0.02,2.98,1.03,0,">1 nonsynonymous","F8L F160P",2
"lib2","SARS-CoV-2","CTAAATCTCACCAGAG",2,39.24,10.43,-0.41,0.04,2.86,1.06,0,"1 nonsynonymous","Y66D",1
"lib2","SARS-CoV-2","CTAAATCTCAGTAATA",7,69.81,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L60T T100M P161Q Y165H E186D",5
"lib2","SARS-CoV-2","CTAAATCTCTGTTGAC",10,86.7,8.85,-1.98,0.07,2.34,1.01,0,">1 nonsynonymous","E10Y F44N",2
"lib2","SARS-CoV-2","CTAAATCTGACGTACC",3,28.55,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T55L D68F N107C P149L",4
"lib2","SARS-CoV-2","CTAAATGAACTGAGAA",12,62.64,6.62,-4.22,0.23,1.5,1.09,0.01,">1 nonsynonymous","F44M G86Y",2
"lib2","SARS-CoV-2","CTAAATGAAGTCAGTC",4,31.15,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Q84K A89I L131Y",3
"lib2","SARS-CoV-2","CTAAATGAAGTTGGAT",15,165.73,10.24,-0.6,0.04,2.76,1.05,0,">1 nonsynonymous","V32C L122R P133W",3
"lib2","SARS-CoV-2","CTAAATGAGACATTAA",16,90.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N13R L60S R73L T100M G117P",5
"lib2","SARS-CoV-2","CTAAATGATCCAAGTT",3,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N D98N A145E E154I",4
"lib2","SARS-CoV-2","CTAAATGCATCACGAG",1,7.33,NA,NA,NA,NA,NA,NA,"stop","N4* F44G F99G",3
"lib2","SARS-CoV-2","CTAAATGCCCATCAAG",11,220.4,10.8,-0.04,0.05,2.95,1.07,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","CTAAATGCGATCAAAT",2,13.93,9.82,-1.01,0.06,2.97,1,0,">1 nonsynonymous","T100M N107E",2
"lib2","SARS-CoV-2","CTAAATGGATTAGTTC",1,6.83,NA,NA,NA,NA,NA,0.57,">1 nonsynonymous","N92P S139V",2
"lib2","SARS-CoV-2","CTAAATGGCAAGTTAC",13,76.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12M I28V D68R V180R K199I",5
"lib2","SARS-CoV-2","CTAAATGGGCGACTCA",7,32.36,6,-4.84,1.07,3,1.18,0,">1 nonsynonymous","P7A S41V C61V F99V N118E L131K V173D",7
"lib2","SARS-CoV-2","CTAAATGTAAATGTAT",5,0.18,NA,NA,NA,NA,NA,NA,"stop","N4* E141G",2
"lib2","SARS-CoV-2","CTAAATGTCATAAGAT",10,0.27,NA,NA,NA,NA,NA,NA,"stop","T100S S147*",2
"lib2","SARS-CoV-2","CTAAATTAAATGTAAC",1,10.51,10.74,-0.09,0.07,2.97,1.05,0.01,">1 nonsynonymous","I2M F12V T55A L122R",4
"lib2","SARS-CoV-2","CTAAATTACAGAAAAT",3,17.12,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","N1K A14L S113L",3
"lib2","SARS-CoV-2","CTAAATTACCCGTGAG",7,77.88,6.45,-4.39,0.34,1.5,1.14,0.01,">1 nonsynonymous","C61N Y123D",2
"lib2","SARS-CoV-2","CTAAATTACTACATCT",12,7.39,NA,NA,NA,NA,NA,NA,"stop","F70Y E76* Y93Q Y119H D137K",5
"lib2","SARS-CoV-2","CTAAATTAGACGAAGG",8,68.66,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10S A22N L38R A105S D112G K128N",6
"lib2","SARS-CoV-2","CTAAATTATAAAAGAT",1,16.1,10.87,0.03,0.06,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAATTATTCATTAT",2,10.82,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N13V W23L F156V",3
"lib2","SARS-CoV-2","CTAAATTCAACGACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F156I S200Q",2
"lib2","SARS-CoV-2","CTAAATTCACTCTTCC",12,134.8,6,-4.84,1.26,1.5,1.14,0.01,">1 nonsynonymous","F8C S36I D98W L131R Y143T",5
"lib2","SARS-CoV-2","CTAAATTCGCATAAAT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","L5V N24* C49A I104M",4
"lib2","SARS-CoV-2","CTAAATTCGTCCACCT",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D W23M N58F N92I C102W A145T",6
"lib2","SARS-CoV-2","CTAAATTGCCCCGTTG",2,2.28,NA,NA,NA,NA,NA,NA,"stop","N1R P7M N13* N58* Y159A",5
"lib2","SARS-CoV-2","CTAAATTGTAAAAGGA",9,113.37,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V52S Y119M R127L L188T",4
"lib2","SARS-CoV-2","CTAAATTTTTCGTTGT",5,29.62,6.83,-4,0.45,1.5,1.23,0.03,">1 nonsynonymous","G9D V32P C61M K94V",4
"lib2","SARS-CoV-2","CTAAATTTTTTGCGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10* T201V",2
"lib2","SARS-CoV-2","CTAACAAAAAATTACG",7,117.04,9.87,-0.96,0.05,2.27,1.04,0,">1 nonsynonymous","R16T T46P T100V V153C",4
"lib2","SARS-CoV-2","CTAACAAAACAAGCCA",2,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F C49Q F99K",3
"lib2","SARS-CoV-2","CTAACAAAACTCTAGT",12,195.72,10.67,-0.17,0.05,2.79,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACAAAGCCAACCA",16,374.47,10.25,-0.59,0.02,2.87,1.03,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","CTAACAAATGGCTTAG",6,66.8,10.78,-0.05,0.03,2.96,1.04,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","CTAACAACACCCTGCA",6,31.33,10.37,-0.46,0.07,2.91,1.07,0,">1 nonsynonymous","K48T L60W",2
"lib2","SARS-CoV-2","CTAACAACCACACTAA",7,38.56,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","Y50F D68K A89R",3
"lib2","SARS-CoV-2","CTAACAACCATACCCA",6,50.55,6.52,-4.31,0.24,1.5,1.09,0.01,">1 nonsynonymous","L5D R179I",2
"lib2","SARS-CoV-2","CTAACAACGACATGGG",9,173.27,10.68,-0.15,0.02,2.97,1.04,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","CTAACAAGAATCTCGC",5,49.47,6.68,-4.16,0.47,1.5,1.17,0.03,">1 nonsynonymous","T55P V77W N130V",3
"lib2","SARS-CoV-2","CTAACAAGACACAGAA",4,38.59,10.69,-0.15,0.04,3,1.03,0,">1 nonsynonymous","R78C V173I",2
"lib2","SARS-CoV-2","CTAACAAGGGCTCTAT",5,33.9,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","V11R D34G G83R D98F Y119R Y178D",6
"lib2","SARS-CoV-2","CTAACAAGTCCCTTAC",3,10.82,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L57K Y159K P169C G174T K199F",5
"lib2","SARS-CoV-2","CTAACAATAAATTACG",2,17.72,8.53,-2.31,0.34,1.74,1.24,0.05,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","CTAACAATCCCATTAT",2,1.98,NA,NA,NA,NA,NA,NA,"stop","G9Q F44* G83Y V103D N171S",5
"lib2","SARS-CoV-2","CTAACAATTACTAAAA",1,19.61,11,0.17,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACAATTCGGTTAT",4,45.98,8.53,-2.31,0.11,2.9,1.08,0,">1 nonsynonymous","E10K Q168K",2
"lib2","SARS-CoV-2","CTAACAATTTCCTGAA",4,12.34,8.8,-2.04,0.3,1.56,1.2,0.07,">1 nonsynonymous","T63M A89Y",2
"lib2","SARS-CoV-2","CTAACACAGGCACCCA",17,172.44,6.42,-4.41,0.35,1.5,1.12,0.01,">1 nonsynonymous","V11A S45Y D137E",3
"lib2","SARS-CoV-2","CTAACACATAGCCGTT",9,45.83,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6L T55I T100G G117R P169R",5
"lib2","SARS-CoV-2","CTAACACATATTCCCC",1,43.99,6.26,-4.58,0.81,1.5,1.15,0.05,">1 nonsynonymous","A18C G51V F62N K87N R127W L188S",6
"lib2","SARS-CoV-2","CTAACACATTAGACCG",5,1.17,NA,NA,NA,NA,NA,NA,"stop","D68K E76L I88* Y178*",4
"lib2","SARS-CoV-2","CTAACACCAAAGGACT",2,50.21,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R25L C49G F160G",3
"lib2","SARS-CoV-2","CTAACACCGACTATAG",3,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D S45K L122V P149R L183D",5
"lib2","SARS-CoV-2","CTAACACCGGACGAAA",3,26.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10C Y50L Y159L",3
"lib2","SARS-CoV-2","CTAACACCGGTCTCTT",3,19.69,10.66,-0.18,0.09,2.88,1.07,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","CTAACACGTCCACGAA",4,15.47,6.85,-3.99,0.39,1.5,1.01,0.04,">1 nonsynonymous","Y50S V181L",2
"lib2","SARS-CoV-2","CTAACACTGCTACTAC",10,69.65,10.48,-0.36,0.06,2.81,1.12,0,">1 nonsynonymous","S45P S200G",2
"lib2","SARS-CoV-2","CTAACAGAAATCTTGA",1,21.9,9.34,-1.5,0.11,1.85,1.01,0.01,">1 nonsynonymous","F12V N40F T148Y",3
"lib2","SARS-CoV-2","CTAACAGATTACAGCA",5,45.55,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R16L I80L V103D",3
"lib2","SARS-CoV-2","CTAACAGCAATACACA",2,8.67,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F8H D98V V173T",3
"lib2","SARS-CoV-2","CTAACAGCACCAAATG",6,106.9,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y21E G83D Y121C",3
"lib2","SARS-CoV-2","CTAACAGCCCTACATG",5,26.09,7.28,-3.55,0.36,1.5,1.16,0.04,">1 nonsynonymous","S41Y Q84T R127T S139R",4
"lib2","SARS-CoV-2","CTAACAGCGTTACTAA",5,114.11,10.65,-0.19,0.05,2.97,1.04,0,">1 nonsynonymous","K56R T100N",2
"lib2","SARS-CoV-2","CTAACAGTTAGCGCGA",10,61.89,8.19,-2.64,0.25,1.5,1,0.03,">1 nonsynonymous","L5T G86R",2
"lib2","SARS-CoV-2","CTAACATAATTGAATA",2,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23P D90K",2
"lib2","SARS-CoV-2","CTAACATATATCAGAT",4,74.63,10.84,0,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACATCTGTAGAAG",2,90.14,10.93,0.09,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACATGTTTTCCTC",1,31.85,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","E154P R179N",2
"lib2","SARS-CoV-2","CTAACATTCATATAGG",3,1.11,NA,NA,NA,NA,NA,NA,"stop","K48* N107L R124I T170F",4
"lib2","SARS-CoV-2","CTAACATTGATACCCC",3,24.04,8.31,-2.53,0.11,1.82,1.05,0,">1 nonsynonymous","W106V G146T",2
"lib2","SARS-CoV-2","CTAACATTGGTAGAAA",2,7.33,10.05,-0.79,0.45,1.94,1.11,0.02,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","CTAACATTTAATGTCA",7,54.49,10.76,-0.08,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACATTTCCTTCCA",10,83.85,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N120V S139Y T148S N157F",4
"lib2","SARS-CoV-2","CTAACCAAAGATGATA",9,251.92,8.88,-1.96,0.05,2.72,1.12,0,">1 nonsynonymous","C61S G116V S164L A192V",4
"lib2","SARS-CoV-2","CTAACCAAGGAATTCT",4,180.26,10.71,-0.13,0.06,2.9,1.14,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","CTAACCAATAAGTAGC",3,49.93,9.64,-1.2,0.08,2.59,1.07,0,">1 nonsynonymous","L60V N118H",2
"lib2","SARS-CoV-2","CTAACCAATGTAGATA",4,71.03,10.83,-0.01,0.07,2.92,1.1,0,"1 nonsynonymous","P197F",1
"lib2","SARS-CoV-2","CTAACCACGAAACTTG",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S K132M",2
"lib2","SARS-CoV-2","CTAACCACGTAGACTC",2,42.72,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","T55Y C61V N92S C158S Y165K",5
"lib2","SARS-CoV-2","CTAACCAGACGACTCT",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126Y S139V",2
"lib2","SARS-CoV-2","CTAACCAGTCTGTGTT",7,65.38,8.26,-2.57,0.22,1.84,1.06,0.02,">1 nonsynonymous","D75R N107D Y175F S200T",4
"lib2","SARS-CoV-2","CTAACCATATTACCTC",3,29.95,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S19Y N40R Y123M P133A V173F",5
"lib2","SARS-CoV-2","CTAACCATCAAATGTG",5,43.43,6,-4.84,1.33,2.3,1.14,0,">1 nonsynonymous","G9H S19F Y91S D98L W106N I142S",6
"lib2","SARS-CoV-2","CTAACCCACATCATGT",7,92.39,9.97,-0.87,0.03,2.95,1.02,0,">1 nonsynonymous","N1W D98H F156A",3
"lib2","SARS-CoV-2","CTAACCCATTGATTCC",1,7.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T3I K128T R136S P161D",4
"lib2","SARS-CoV-2","CTAACCCCAATATTAA",19,122.2,9.86,-0.98,0.07,2.15,1,0,">1 nonsynonymous","D34Y Y66H",2
"lib2","SARS-CoV-2","CTAACCCGGACTTGGC",8,135.62,10.74,-0.1,0.04,2.9,1.11,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","CTAACCCTACCAAATT",4,26.06,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Y121C S147I C158S L187W",4
"lib2","SARS-CoV-2","CTAACCCTAGTTCGAC",3,40.74,10.77,-0.07,0.07,2.8,1.17,0,"1 nonsynonymous","Y123H",1
"lib2","SARS-CoV-2","CTAACCCTATTTACGA",6,16.85,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L57V T85V D137T G166W",4
"lib2","SARS-CoV-2","CTAACCCTTAGCCCAA",7,44.14,6.08,-4.76,0.76,1.5,1.11,0.01,">1 nonsynonymous","L95R G101F Y143V G155M",4
"lib2","SARS-CoV-2","CTAACCGAAAAACAAT",6,20.72,8.77,-2.07,0.21,1.5,1.02,0.02,">1 nonsynonymous","T3Y K56P I142H",3
"lib2","SARS-CoV-2","CTAACCGAACACCCAA",7,0.43,NA,NA,NA,NA,NA,NA,"stop","V115*",1
"lib2","SARS-CoV-2","CTAACCGAAGCAAAAC",16,177.15,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","L5P V11H Y35T Y50F T85M P161W",6
"lib2","SARS-CoV-2","CTAACCGATTATGCCA",10,72.52,8.73,-2.11,0.22,1.83,1.11,0.02,">1 nonsynonymous","N4H T55R A105C Q168V K199S",5
"lib2","SARS-CoV-2","CTAACCGCATAGCCAA",18,185.8,10.83,0,0.05,2.89,1.11,0,">1 nonsynonymous","S139T A192R",2
"lib2","SARS-CoV-2","CTAACCGTAATTTTAA",4,17.03,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I28C G101T D112S K128V P197H",5
"lib2","SARS-CoV-2","CTAACCGTGAAGGATA",11,173.84,9.46,-1.38,0.06,2.25,1.08,0,">1 nonsynonymous","N1L Y35G K87W",3
"lib2","SARS-CoV-2","CTAACCTACCACAAAT",3,2.07,NA,NA,NA,NA,NA,NA,"stop","C6Y A33S D68L P149* V153I",5
"lib2","SARS-CoV-2","CTAACCTATGTTCAAT",2,81.68,9.58,-1.25,0.05,2.85,1.09,0,">1 nonsynonymous","F62A Q168V",2
"lib2","SARS-CoV-2","CTAACCTCACATTGCA",2,48.85,8.95,-1.89,0.1,2.23,1.05,0,">1 nonsynonymous","L38V N118F K199H",3
"lib2","SARS-CoV-2","CTAACCTCTGACCCTT",16,281.04,10.82,-0.02,0.03,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACCTGCACCCCGG",3,64.63,10.88,0.04,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAACCTTGGAACGAA",4,0.68,NA,NA,NA,NA,NA,NA,"stop","C61I V103I I142L Q176*",4
"lib2","SARS-CoV-2","CTAACCTTTATACGCG",2,0.98,NA,NA,NA,NA,NA,NA,"stop","C6S A33S L60T K94* Y121D F160R",6
"lib2","SARS-CoV-2","CTAACCTTTGAAACAA",7,62.34,10.57,-0.27,0.03,2.97,1.04,0,"1 nonsynonymous","I142Y",1
"lib2","SARS-CoV-2","CTAACGAAATGCTAAT",1,12.13,9.76,-1.07,0.17,2.03,1.19,0.02,">1 nonsynonymous","N1R S139R L183V",3
"lib2","SARS-CoV-2","CTAACGAACCAGTCAC",6,83.45,10.77,-0.07,0.03,2.96,1.06,0,">1 nonsynonymous","Y39I Q168S",2
"lib2","SARS-CoV-2","CTAACGAACGCATATA",2,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W Y119S",2
"lib2","SARS-CoV-2","CTAACGACAAAATCAT",7,8.85,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N1T N13D N40V C150D Q168K",5
"lib2","SARS-CoV-2","CTAACGAGTTGTTAAG",17,96.63,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C49M F99C K128C T140S G146N",5
"lib2","SARS-CoV-2","CTAACGATACCCAACA",2,52.59,10.18,-0.66,0.07,2.72,1.09,0,">1 nonsynonymous","V37F A89R",2
"lib2","SARS-CoV-2","CTAACGATTTATTCAG",2,67.54,10.77,-0.07,0.07,2.95,1.06,0,">1 nonsynonymous","Y39M T63K",2
"lib2","SARS-CoV-2","CTAACGCACGCCAGGA",1,15.59,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","R25T D34I G83S",3
"lib2","SARS-CoV-2","CTAACGCTTATTTTAA",9,55.38,6.58,-4.26,0.17,1.5,1.09,0,">1 nonsynonymous","Y50F V103T N107T V115G",4
"lib2","SARS-CoV-2","CTAACGGATAGATTAT",3,3,NA,NA,NA,NA,NA,NA,"stop","N120V P149* N157I",3
"lib2","SARS-CoV-2","CTAACGGTAGATCAAT",4,71.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40V A89F D112K",3
"lib2","SARS-CoV-2","CTAACGGTTATGCGCG",7,23.88,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R25A D34Y C49Y D90G T140M",5
"lib2","SARS-CoV-2","CTAACGTAAATAGCCT",2,32.57,10.18,-0.65,0.09,2.71,1,0,">1 nonsynonymous","N4T Y35R T201S",3
"lib2","SARS-CoV-2","CTAACGTAGAAAGATC",1,5.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","CTAACGTAGTCCCGTT",13,280.64,10.65,-0.19,0.04,2.85,1.05,0,"1 nonsynonymous","E135T",1
"lib2","SARS-CoV-2","CTAACGTATGACGAGA",5,94.89,9.72,-1.12,0.05,2.91,1.11,0,">1 nonsynonymous","V37M Y119F",2
"lib2","SARS-CoV-2","CTAACGTATGTACAAC",5,100.92,10.07,-0.76,0.06,2.71,1.06,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","CTAACGTCCCAATAGT",13,130.64,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N107R N120V R127G Y178S",4
"lib2","SARS-CoV-2","CTAACGTGCCTGATTA",12,243.46,9.9,-0.94,0.04,2.17,1.02,0,">1 nonsynonymous","D34R K48M",2
"lib2","SARS-CoV-2","CTAACGTGTCCTCTAT",2,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A P96L Q168L",3
"lib2","SARS-CoV-2","CTAACGTTTGTCCAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F17* Y175K",2
"lib2","SARS-CoV-2","CTAACTAAAAAATGGG",9,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V N120S K128R",3
"lib2","SARS-CoV-2","CTAACTAAACAATACT",1,15.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y119R I138R Y178E K198A",4
"lib2","SARS-CoV-2","CTAACTAAGCTCATTG",2,0.4,NA,NA,NA,NA,NA,NA,"stop","V37* K56G N120K",3
"lib2","SARS-CoV-2","CTAACTAAGTGTTTTA",3,13.76,9.22,-1.62,0.33,1.91,1.06,0.02,">1 nonsynonymous","N1T W23V",2
"lib2","SARS-CoV-2","CTAACTAATAATAAGG",10,247.71,10.29,-0.55,0.03,2.83,1.04,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CTAACTAATATACCAT",6,40.32,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T55I K87S D112E T140K E154Y G174C",6
"lib2","SARS-CoV-2","CTAACTACAAACACTT",2,60.79,10.75,-0.08,0.08,2.98,1.05,0,"1 nonsynonymous","Y39K",1
"lib2","SARS-CoV-2","CTAACTACATAATGAG",4,19.66,NA,NA,NA,NA,NA,NA,"stop","C61F I88*",2
"lib2","SARS-CoV-2","CTAACTACCCCCAATG",1,16.74,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","K94E F134V",2
"lib2","SARS-CoV-2","CTAACTACCCTGGACC",10,55.9,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","N4R L57G S113Y E141G",4
"lib2","SARS-CoV-2","CTAACTATATAATTCA",1,102.23,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S29F P96L N110Q N120K E154Q F160T L162S A190S",8
"lib2","SARS-CoV-2","CTAACTATATGTACAG",9,108.8,10.56,-0.28,0.03,2.89,1.1,0,">1 nonsynonymous","D90S N151L",2
"lib2","SARS-CoV-2","CTAACTATCGCAACTA",1,94.21,11.05,0.22,0.05,3,1,0,">1 nonsynonymous","K56E N109V F160Y",3
"lib2","SARS-CoV-2","CTAACTATTAAGAGAA",1,41.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D112R S139F",2
"lib2","SARS-CoV-2","CTAACTATTACACGAG",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74D N120K",2
"lib2","SARS-CoV-2","CTAACTCACCAAGTCT",1,11.16,6.57,-4.26,0.76,1.5,1.06,0.01,">1 nonsynonymous","D90T A105D P197M",3
"lib2","SARS-CoV-2","CTAACTCAGGCTCGCC",4,47.61,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C61S D68V R73I F160T",4
"lib2","SARS-CoV-2","CTAACTCCGAAATGGA",5,42.98,10.74,-0.1,0.06,2.96,1.07,0,"1 nonsynonymous","E154G",1
"lib2","SARS-CoV-2","CTAACTCCGATATAAG",1,103.68,8.93,-1.91,0.07,2.7,1.04,0,">1 nonsynonymous","G152V G174W",2
"lib2","SARS-CoV-2","CTAACTCTAGATTTGG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37H C61P T85M N130E",4
"lib2","SARS-CoV-2","CTAACTGAAAAGACAA",2,3.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTAACTGAACGCTGGC",9,1.14,NA,NA,NA,NA,NA,NA,"stop","I104S K114* Q168L",3
"lib2","SARS-CoV-2","CTAACTGCGCTAACCT",2,2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","CTAACTGCTTAGAAAT",1,5.61,6,-4.84,2,3,1.05,0,">1 nonsynonymous","L60R F99D",2
"lib2","SARS-CoV-2","CTAACTGCTTCGTAAA",1,17.44,10.47,-0.37,0.06,2.96,1,0,">1 nonsynonymous","A105G L122N",2
"lib2","SARS-CoV-2","CTAACTGGCGGGTCCA",9,28.2,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G51K F62C V71G A81R I88E Y123S",6
"lib2","SARS-CoV-2","CTAACTGGGCCATTTA",4,27.72,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N1L D90I G117R K199Q",4
"lib2","SARS-CoV-2","CTAACTGTACGAACTA",10,76.99,10.88,0.04,0.06,2.89,1.11,0,"1 nonsynonymous","A33W",1
"lib2","SARS-CoV-2","CTAACTGTCCATGAGT",2,25.48,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V65K W106A P149L K198N",4
"lib2","SARS-CoV-2","CTAACTGTGATATGCT",12,275.47,9.54,-1.29,0.03,2.92,1.07,0,">1 nonsynonymous","T3V Y119S",2
"lib2","SARS-CoV-2","CTAACTGTTACCTAAT",11,189.55,10.57,-0.27,0.04,2.91,1.07,0,"1 nonsynonymous","F62N",1
"lib2","SARS-CoV-2","CTAACTTAAACGAACT",9,88.23,9.89,-0.94,0.08,2.19,1,0,">1 nonsynonymous","N58A A105V L122V",3
"lib2","SARS-CoV-2","CTAACTTACTAACCTA",14,109.05,10.53,-0.31,0.05,2.92,1.05,0,">1 nonsynonymous","N40T D97L K132G",3
"lib2","SARS-CoV-2","CTAACTTAGGACGAGA",5,96.47,10.69,-0.14,0.05,2.95,1.04,0,">1 nonsynonymous","D98S N120R",2
"lib2","SARS-CoV-2","CTAACTTATACATTCG",1,41.27,9.98,-0.86,0.06,2.83,1.08,0,">1 nonsynonymous","E10M T170S L188H",3
"lib2","SARS-CoV-2","CTAACTTTTAAGAACA",10,44.21,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41R A89D I104S",3
"lib2","SARS-CoV-2","CTAACTTTTAGAAAAT",6,145.58,9.25,-1.58,0.05,2.65,1.1,0,">1 nonsynonymous","T63R N107E A190V",3
"lib2","SARS-CoV-2","CTAAGAAAATTGGCAC",3,10.08,10.66,-0.17,0.07,3,1.01,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","CTAAGAAAATTTTCGT",11,158,10.04,-0.79,0.06,2.47,1.06,0,">1 nonsynonymous","R27I A42M D97V R136S",4
"lib2","SARS-CoV-2","CTAAGAAATAAACTAA",3,18.93,9.7,-1.14,0.16,2.46,1.02,0.01,">1 nonsynonymous","F12Y T55S",2
"lib2","SARS-CoV-2","CTAAGAACAACTAAAC",6,17.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F C61L Y93D I104E P149I",5
"lib2","SARS-CoV-2","CTAAGAACAATATTTT",8,0.07,NA,NA,NA,NA,NA,NA,"stop","S36T K48A A105S Q163*",4
"lib2","SARS-CoV-2","CTAAGAACCCTACTAT",2,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S C102H V180A",3
"lib2","SARS-CoV-2","CTAAGAAGAGTACGAA",12,220.3,9.9,-0.94,0.06,2.49,1.07,0,">1 nonsynonymous","P7I D90R",2
"lib2","SARS-CoV-2","CTAAGAAGCACATCAT",2,16.48,8.52,-2.31,0.13,2.87,1.07,0.01,">1 nonsynonymous","E10S G146D P169H",3
"lib2","SARS-CoV-2","CTAAGAAGCCCGGGAT",4,48.25,10.32,-0.51,0.09,2.82,1.01,0,">1 nonsynonymous","T55N G152I",2
"lib2","SARS-CoV-2","CTAAGAAGCTCTGTAA",6,40.41,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R16Y I72E L122P R136Y",4
"lib2","SARS-CoV-2","CTAAGAAGTGAAAACC",1,13.05,6.3,-4.53,1.38,1.67,1.12,0.01,">1 nonsynonymous","F12K D68Q N118T N130W N151T",5
"lib2","SARS-CoV-2","CTAAGAAGTGATAAGG",9,77.4,10.43,-0.4,0.03,2.94,1.06,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","CTAAGAATAAGCATCT",14,2.78,NA,NA,NA,NA,NA,NA,"stop","A14N G83K N130Q E141L P149*",5
"lib2","SARS-CoV-2","CTAAGAATACCTGTGT",2,35.23,8.6,-2.23,0.07,2.12,1,0,">1 nonsynonymous","N4E K48Q I104T G166R K199L",5
"lib2","SARS-CoV-2","CTAAGAATCATGCCAG",7,79.87,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R16L Y93M K128L",3
"lib2","SARS-CoV-2","CTAAGAATTTATTAAC",5,21.35,10.81,-0.03,0.09,2.94,1.06,0.01,">1 nonsynonymous","A42G T201S",2
"lib2","SARS-CoV-2","CTAAGACAACCTAAAA",16,103.89,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y21S T63Q R78P W106K",4
"lib2","SARS-CoV-2","CTAAGACAACGTAATT",3,26.81,6.94,-3.9,0.33,1.57,1.28,0.02,">1 nonsynonymous","V52A W106T",2
"lib2","SARS-CoV-2","CTAAGACAATGTGTAA",8,246.04,10.23,-0.6,0.04,2.8,1.06,0,">1 nonsynonymous","F44L K132I",2
"lib2","SARS-CoV-2","CTAAGACAATTTTTGA",5,126.24,10.64,-0.2,0.04,2.93,1.05,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","CTAAGACAGGTATAAA",1,0.25,NA,NA,NA,NA,NA,NA,"stop","P7W C49D F99L A105I D112V L122* C158D",7
"lib2","SARS-CoV-2","CTAAGACCATAAAGTT",7,55.96,8.43,-2.41,0.14,1.77,1.08,0.01,">1 nonsynonymous","S41I F62N F134L G155T",4
"lib2","SARS-CoV-2","CTAAGACCCAAGACGG",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94R F156D",2
"lib2","SARS-CoV-2","CTAAGACGGCCGTACA",2,22.45,6.09,-4.74,1.32,1.5,1.17,0.05,">1 nonsynonymous","C61R T100R V103M F167N",4
"lib2","SARS-CoV-2","CTAAGACTACACAACT",6,2.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","CTAAGACTATTCCAAT",6,99.04,10.88,0.04,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGAGAAAATCATA",17,304,10.8,-0.04,0.04,2.9,1.1,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","CTAAGAGGACATAGCA",2,17.83,7,-3.84,0.48,1.5,1.08,0.04,">1 nonsynonymous","N4T S53F P82A N120Q",4
"lib2","SARS-CoV-2","CTAAGAGGGCACCCAC",1,9.12,10.73,-0.1,0.11,2.9,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGAGTCAACAATT",9,4.26,NA,NA,NA,NA,NA,NA,"stop","T63L L122K G172*",3
"lib2","SARS-CoV-2","CTAAGAGTGGGGTACC",1,10.78,9.96,-0.88,0.14,2.78,1.02,0.01,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","CTAAGATAAACGTAAA",1,9.82,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P82F S113E",2
"lib2","SARS-CoV-2","CTAAGATAACACGGAG",2,22.04,10.89,0.05,0.05,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGATATACTGAAC",11,41,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T15K G86V",2
"lib2","SARS-CoV-2","CTAAGATATGAGACCA",9,111.3,10.54,-0.29,0.03,2.91,1.05,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","CTAAGATATGATCGAC",1,17.47,10.69,-0.14,0.07,3,1.05,0,">1 nonsynonymous","C61I S113A",2
"lib2","SARS-CoV-2","CTAAGATCATCCGATT",10,48.55,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","D34P R127V",2
"lib2","SARS-CoV-2","CTAAGATGAATTCTAA",2,72.05,9.61,-1.23,0.04,2.89,1.06,0,">1 nonsynonymous","Y119S P149S",2
"lib2","SARS-CoV-2","CTAAGATGACTATTGA",7,13.97,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13P V32K D90R N118T",4
"lib2","SARS-CoV-2","CTAAGATTAAGAACAT",6,98.56,10.06,-0.77,0.06,2.33,1.05,0,">1 nonsynonymous","R25C P197L",2
"lib2","SARS-CoV-2","CTAAGATTGATGGTCA",8,169.73,10.41,-0.43,0.05,2.86,1.06,0,">1 nonsynonymous","D98V P149T L188R",3
"lib2","SARS-CoV-2","CTAAGCAAACTCGCTG",1,20.38,10.11,-0.72,0.16,2.57,1.19,0.01,">1 nonsynonymous","N120L N171C",2
"lib2","SARS-CoV-2","CTAAGCAACTTCACTA",15,56.36,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","L5S C49R L60M Y91T D97F S129A S139R P169F",8
"lib2","SARS-CoV-2","CTAAGCAAGACAAATA",3,65.34,10.6,-0.24,0.04,3,1,0,"1 nonsynonymous","Q144V",1
"lib2","SARS-CoV-2","CTAAGCACAATTGAAG",2,36.19,10.83,-0.01,0.07,2.92,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGCACAGGGTTGG",15,135.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L57N Y165S",2
"lib2","SARS-CoV-2","CTAAGCAGCATTATTA",13,106.84,6,-4.84,1.01,1.5,1.16,0.01,">1 nonsynonymous","P82T I104F G117S E141R",4
"lib2","SARS-CoV-2","CTAAGCATATTAATAA",4,63.04,9.53,-1.3,0.05,2.6,1.09,0,">1 nonsynonymous","G9V T15L G155E",3
"lib2","SARS-CoV-2","CTAAGCCAGGAGGAAT",1,36.07,7.55,-3.29,0.26,1.5,1.03,0.03,">1 nonsynonymous","G9T R73A I80M T201D",4
"lib2","SARS-CoV-2","CTAAGCCAGGTCACAC",3,29.92,10.82,-0.02,0.12,2.76,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGCCATTGATATA",7,56.73,6,-4.84,2,3,1.22,0,">1 nonsynonymous","K56L G86Q C102L N107W E141V G146W",6
"lib2","SARS-CoV-2","CTAAGCCCAGGAAATT",4,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N157I G166R",2
"lib2","SARS-CoV-2","CTAAGCCGTCAAAGAC",15,5.44,NA,NA,NA,NA,NA,NA,"stop","K26E Y50* K128V",3
"lib2","SARS-CoV-2","CTAAGCCTCTCGCCAT",1,52.04,10.84,0,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGCGAACAAAACA",12,158.81,10.65,-0.18,0.03,2.99,1.02,0,">1 nonsynonymous","N4R L57I",2
"lib2","SARS-CoV-2","CTAAGCGAATTTGACC",14,96.92,6,-4.84,2,3,1.22,0,">1 nonsynonymous","T3G G117E E135V S147F",4
"lib2","SARS-CoV-2","CTAAGCGCATCCATAA",2,14.96,9.23,-1.61,0.3,1.67,1.1,0.05,">1 nonsynonymous","D90M A105F",2
"lib2","SARS-CoV-2","CTAAGCGCGGTAACTG",3,27.1,6,-4.84,1.49,1.5,1.1,0.01,">1 nonsynonymous","F12L A22M W106V Y119S",4
"lib2","SARS-CoV-2","CTAAGCGGAATTAGGA",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R R127N V173T",3
"lib2","SARS-CoV-2","CTAAGCGTGGCGCACG",8,131.15,10.88,0.04,0.03,2.99,1.02,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CTAAGCGTTATTGAAC",4,0.8,NA,NA,NA,NA,NA,NA,"stop","V37M P96M F156*",3
"lib2","SARS-CoV-2","CTAAGCTAAACGACGT",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R N40Y Y119R",3
"lib2","SARS-CoV-2","CTAAGCTAACAGAGAA",14,191.37,9.61,-1.22,0.07,1.8,1.07,0,">1 nonsynonymous","I88T P149S",2
"lib2","SARS-CoV-2","CTAAGCTAATGACTAC",2,53.43,10.95,0.11,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGCTATAAATACT",3,64.47,10.18,-0.66,0.06,2.19,1,0,"1 nonsynonymous","E76G",1
"lib2","SARS-CoV-2","CTAAGCTATCACCCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W V103P P133Y",3
"lib2","SARS-CoV-2","CTAAGCTCGTTATTGT",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T S139R G152I",3
"lib2","SARS-CoV-2","CTAAGCTTAAAAAAGT",1,18.55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V77L R124P",2
"lib2","SARS-CoV-2","CTAAGGAAATGGTAAT",1,17.44,10.84,0.01,0.08,2.87,1.09,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","CTAAGGAAGAATCGAT",2,11.12,9.45,-1.39,0.19,1.78,1.01,0.02,"1 nonsynonymous","F12D",1
"lib2","SARS-CoV-2","CTAAGGAGAAAAAAAA",8,28.46,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F8L G101W T140P S184T",4
"lib2","SARS-CoV-2","CTAAGGAGATGATTGT",3,0.17,NA,NA,NA,NA,NA,NA,"stop","S43* V153* F156S Y175F",4
"lib2","SARS-CoV-2","CTAAGGATACGAACGT",1,8.44,10.01,-0.82,0.09,2.05,1,0,">1 nonsynonymous","E10G S45V S53L",3
"lib2","SARS-CoV-2","CTAAGGATGAAATAAA",4,16.28,7.9,-2.94,0.29,1.57,1.13,0.02,">1 nonsynonymous","V11N A42R L60R S113G",4
"lib2","SARS-CoV-2","CTAAGGATTAACCAGG",3,0.77,NA,NA,NA,NA,NA,NA,"stop","V32* P82G P161Y F167L",4
"lib2","SARS-CoV-2","CTAAGGATTACCACCA",12,101.37,10.73,-0.11,0.05,2.93,1.09,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","CTAAGGATTATCTTAT",2,56.85,6,-4.84,2,3,1.22,0,">1 nonsynonymous","V37P D90G V103S N151R",4
"lib2","SARS-CoV-2","CTAAGGATTGTGTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S45L K87R R127A P161L G174* V180K",6
"lib2","SARS-CoV-2","CTAAGGCACCATAAGT",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80F I88A K128Y P161L",4
"lib2","SARS-CoV-2","CTAAGGCCACGAACCA",1,11.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L95K Y121I K128P",3
"lib2","SARS-CoV-2","CTAAGGGATGACTAAG",8,247.63,10.7,-0.13,0.05,2.94,1.07,0,"1 nonsynonymous","K26A",1
"lib2","SARS-CoV-2","CTAAGGGTAACCATAC",6,135.5,10.53,-0.31,0.05,2.8,1.09,0,">1 nonsynonymous","V32W T85Y",2
"lib2","SARS-CoV-2","CTAAGGGTTCGTGACA",7,37.19,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F70I F99V V181S",3
"lib2","SARS-CoV-2","CTAAGGTAAACATGGA",1,36.58,10.23,-0.61,0.04,2.93,1,0,">1 nonsynonymous","R27T A105S I142P",3
"lib2","SARS-CoV-2","CTAAGGTAACTAACCG",2,17.84,10.8,-0.03,0.11,2.86,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTAAGGTATATCACAT",4,89.87,10.05,-0.79,0.07,2.2,1,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","CTAAGGTCCATCATTC",1,12.84,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","T63K F70R F99S I104F I142F",5
"lib2","SARS-CoV-2","CTAAGGTTAATCGAAA",3,44.65,10.62,-0.21,0.02,3,1.01,0,">1 nonsynonymous","D90A N120H",2
"lib2","SARS-CoV-2","CTAAGTAAAACATAAC",6,142.12,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F47I F99H G116P Y178I K199G",5
"lib2","SARS-CoV-2","CTAAGTAACCAGACAA",2,26.48,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","N92F I138S Y178R",3
"lib2","SARS-CoV-2","CTAAGTAAGCAAATAA",6,27.24,6.21,-4.63,0.96,1.5,1.11,0.04,">1 nonsynonymous","A81F G146R",2
"lib2","SARS-CoV-2","CTAAGTAATTACGCTA",2,28.53,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","A89E C158M",2
"lib2","SARS-CoV-2","CTAAGTACTAACTTTG",5,109.04,9.78,-1.06,0.04,2.85,1.05,0,"1 nonsynonymous","N107E",1
"lib2","SARS-CoV-2","CTAAGTAGAGCGCATA",15,289.49,10.82,-0.02,0.04,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAAGTAGAGGTAAAC",10,98.29,10.29,-0.55,0.04,2.85,1.06,0,">1 nonsynonymous","I2K E135V K199M",3
"lib2","SARS-CoV-2","CTAAGTAGCCGCAGAA",16,248.44,10.69,-0.15,0.03,2.95,1.06,0,">1 nonsynonymous","C61T G83F F160H",3
"lib2","SARS-CoV-2","CTAAGTATAGAGAACA",11,146.59,6,-4.84,1.09,1.5,1.09,0,">1 nonsynonymous","C61I N130T Y143P S200F",4
"lib2","SARS-CoV-2","CTAAGTATCATACCGT",3,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V G51T F62A Y143M",4
"lib2","SARS-CoV-2","CTAAGTATGCCGACCG",6,20.48,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","G101K",1
"lib2","SARS-CoV-2","CTAAGTCACGAGTCAC",14,146.55,9.84,-1,0.05,2.86,1.02,0,">1 nonsynonymous","T63F S147T T170A",3
"lib2","SARS-CoV-2","CTAAGTCCTAATCCAG",6,79.93,10.79,-0.04,0.03,2.95,1.06,0,">1 nonsynonymous","L122E T148S",2
"lib2","SARS-CoV-2","CTAAGTCCTCGGTGAG",2,15.35,9.67,-1.17,0.08,3,1.04,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","CTAAGTCTATACAATT",6,3.47,NA,NA,NA,NA,NA,NA,"stop","N64H Q84* G174S",3
"lib2","SARS-CoV-2","CTAAGTGAATTCCAGT",4,105.19,10.11,-0.72,0.03,2.81,1.12,0,">1 nonsynonymous","Y39W G146W",2
"lib2","SARS-CoV-2","CTAAGTGCGTATTAAA",2,71.73,9.17,-1.66,0.09,1.99,1.1,0,">1 nonsynonymous","L57E G116V K128S K198E",4
"lib2","SARS-CoV-2","CTAAGTTAGCCCAGAC",10,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A42Y T55M R78L Y91G",5
"lib2","SARS-CoV-2","CTAAGTTCCTAATGAA",8,40.81,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L5C A33W L57G L162W",4
"lib2","SARS-CoV-2","CTAAGTTTGCGGTTTT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","C6I P191N K199*",3
"lib2","SARS-CoV-2","CTAATAAAAACTATTT",7,78.82,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F62T D68R K87S P149Q",4
"lib2","SARS-CoV-2","CTAATAAAACACTCAA",8,51.2,9.6,-1.23,0.09,1.91,1.04,0,">1 nonsynonymous","V32K K94V",2
"lib2","SARS-CoV-2","CTAATAAAACTAGGCG",8,33.92,9.11,-1.73,0.16,1.89,1.09,0.01,">1 nonsynonymous","T15S G86A",2
"lib2","SARS-CoV-2","CTAATAAAATCATGCT",1,46.94,8.1,-2.74,0.16,1.51,1.06,0.01,">1 nonsynonymous","S41A D59S T100V N107I",4
"lib2","SARS-CoV-2","CTAATAAACGTCGGAG",2,63.94,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L60M D98V G172I",3
"lib2","SARS-CoV-2","CTAATAAAGAAATATA",4,34.88,9.42,-1.41,0.13,2,1.11,0.01,">1 nonsynonymous","Y123M P177S",2
"lib2","SARS-CoV-2","CTAATAAAGGCTAGTC",1,40.31,6.02,-4.82,0.51,3,1.17,0.01,">1 nonsynonymous","D98M Y143S G152R",3
"lib2","SARS-CoV-2","CTAATAAAGTTCCAGA",2,32.37,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","N107R S139F V173A Y178L",4
"lib2","SARS-CoV-2","CTAATAAATAGGTATG",3,22.56,7.25,-3.59,0.5,1.5,1.05,0.08,">1 nonsynonymous","N13C C158Q",2
"lib2","SARS-CoV-2","CTAATAAATATGTAAA",4,24.08,10.75,-0.08,0.08,2.81,1.11,0,">1 nonsynonymous","T85M T201I",2
"lib2","SARS-CoV-2","CTAATAAATTTGCTTG",22,4.22,NA,NA,NA,NA,NA,NA,"stop","R27P K87R N157*",3
"lib2","SARS-CoV-2","CTAATAACTGTAAATT",1,27.08,6.17,-4.66,0.63,3,1.22,0.01,"1 nonsynonymous","Y93T",1
"lib2","SARS-CoV-2","CTAATAAGGACGTTCC",3,50.84,8.56,-2.28,0.11,2.78,1.09,0.01,">1 nonsynonymous","R27I K87F Y159L",3
"lib2","SARS-CoV-2","CTAATAAGTTTTCATT",13,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150S",1
"lib2","SARS-CoV-2","CTAATAATAACAGTAA",7,43.82,7.95,-2.89,0.41,1.5,1.13,0.05,">1 nonsynonymous","S113C E141D G152V",3
"lib2","SARS-CoV-2","CTAATAATAGCAGTGT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","CTAATAATCAAACCTA",4,12.55,10.79,-0.04,0.09,2.89,1.1,0,">1 nonsynonymous","N64A N130M",2
"lib2","SARS-CoV-2","CTAATAATCATCACAC",5,2.32,NA,NA,NA,NA,NA,NA,"stop","A14* N24G T55S Q176P",4
"lib2","SARS-CoV-2","CTAATAATCTAAGATC",8,32.16,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","D59W G86I D98F R124T N171I",5
"lib2","SARS-CoV-2","CTAATAATGCGCGACC",2,40.76,10.2,-0.64,0.08,2.91,1,0,">1 nonsynonymous","N1M G9M E141K T148D",4
"lib2","SARS-CoV-2","CTAATAATTAAAGAAA",2,29.62,9.22,-1.61,0.19,1.52,1.11,0.02,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","CTAATAATTAATAATT",2,5.84,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","K56M N64T K94M Y119Q R136S L162P",6
"lib2","SARS-CoV-2","CTAATAATTATACCGA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","G9S Y35R K114* Y119C Y143L",5
"lib2","SARS-CoV-2","CTAATACAAGGGCGTA",3,24.37,6,-4.84,1.93,3,1.16,0,">1 nonsynonymous","G86R N107P",2
"lib2","SARS-CoV-2","CTAATACAATACGAAG",3,18.36,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","D68R L95G N107C",3
"lib2","SARS-CoV-2","CTAATACAATGTAAAC",5,528.73,10.89,0.05,0.04,2.96,1.05,0,">1 nonsynonymous","A42G F160K",2
"lib2","SARS-CoV-2","CTAATACATCCTGCTA",7,19.02,6,-4.84,2,1.5,1.27,0.08,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","CTAATACATGTTCAAG",3,45.76,10.94,0.11,0.06,2.96,1.05,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","CTAATACCAGTTAATG",2,40.56,10.09,-0.75,0.13,2.46,1.07,0.01,">1 nonsynonymous","R27K D59W Q84N P149D",4
"lib2","SARS-CoV-2","CTAATACCCAGACGAT",4,19.13,9.09,-1.74,0.16,1.5,1.09,0.01,">1 nonsynonymous","S43A K94D",2
"lib2","SARS-CoV-2","CTAATACCGCGGATTA",2,6.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V Y119F Y143F",3
"lib2","SARS-CoV-2","CTAATACCTACACTTG",5,2.49,NA,NA,NA,NA,NA,NA,"stop","S19A T100K T140L T201*",4
"lib2","SARS-CoV-2","CTAATACCTGAAGAGA",1,30.21,9.7,-1.13,0.06,2.99,1.05,0,">1 nonsynonymous","G9E K114V E154L",3
"lib2","SARS-CoV-2","CTAATACGGACTATAT",3,43.95,9.56,-1.27,0.15,1.91,1.07,0.01,">1 nonsynonymous","L57N D90L",2
"lib2","SARS-CoV-2","CTAATACTAACACGGT",4,1.75,NA,NA,NA,NA,NA,NA,"stop","F44M N58* Q84A G146L L162M S184R K199P",7
"lib2","SARS-CoV-2","CTAATACTAGGTGTAC",5,66.17,9.84,-0.99,0.05,2.91,1.08,0,">1 nonsynonymous","G9R N64H D90Y L125A",4
"lib2","SARS-CoV-2","CTAATACTATATAGCA",8,189.75,10.83,-0.01,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAATAGAACGTGAAG",8,0,NA,NA,NA,NA,NA,NA,"stop","A67D D97* S139R",3
"lib2","SARS-CoV-2","CTAATAGATTATCAAA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Q P96F A105R G146A",4
"lib2","SARS-CoV-2","CTAATAGCGAAATGCC",4,113.39,10.83,0,0.05,2.98,1.04,0,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","CTAATAGGATTACCTG",4,73.41,8.19,-2.65,0.14,1.5,1.15,0.01,">1 nonsynonymous","F44S Y121R",2
"lib2","SARS-CoV-2","CTAATAGTAGTAGCAG",1,8.79,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N24V V77R D112G",3
"lib2","SARS-CoV-2","CTAATAGTCAGGTATG",3,27.09,9.4,-1.44,0.08,2.19,1.01,0,">1 nonsynonymous","T85H V103L",2
"lib2","SARS-CoV-2","CTAATAGTGTTGCATA",4,73.43,9.61,-1.22,0.08,2.22,1.1,0,">1 nonsynonymous","N130C G146W E186K P197R",4
"lib2","SARS-CoV-2","CTAATAGTTTGACAAA",6,48.62,8.44,-2.4,0.12,1.74,1.13,0.01,">1 nonsynonymous","S29P F47C N130G G155S",4
"lib2","SARS-CoV-2","CTAATATAAAGCAATT",1,47.39,8.2,-2.64,0.11,2.06,1.12,0.01,">1 nonsynonymous","D98F I142R T201S",3
"lib2","SARS-CoV-2","CTAATATAATTGGTCA",22,124.24,9.82,-1.02,0.02,2.94,1.07,0,">1 nonsynonymous","S36M F156G",2
"lib2","SARS-CoV-2","CTAATATACAAGAAAC",6,122.64,9.41,-1.42,0.11,2.35,1.08,0.01,"1 nonsynonymous","Y121R",1
"lib2","SARS-CoV-2","CTAATATATATGAGAG",24,238.26,10.4,-0.44,0.04,2.91,1.07,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","CTAATATCAGATGGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","K48S P96S I104R E186*",4
"lib2","SARS-CoV-2","CTAATATCGCTAGATC",7,433.46,10.72,-0.12,0.02,2.98,1.02,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","CTAATATGGCTATGCT",7,75.59,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V37T E76G D90E G117L P149T F167N",6
"lib2","SARS-CoV-2","CTAATATGTGAGCAGA",1,15.71,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G9A C158P Y165N Y175M",4
"lib2","SARS-CoV-2","CTAATATGTTCCCATG",6,44.72,6.18,-4.66,0.18,2.78,1.07,0,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","CTAATATTAATATCGT",1,21.14,10.02,-0.81,0.08,2.1,1.05,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","CTAATATTACCGTTCA",2,14.65,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I88P G101V",2
"lib2","SARS-CoV-2","CTAATATTCAACCTTA",1,44.52,10.26,-0.57,0.04,2.92,1.05,0,">1 nonsynonymous","S45L C61K V173L",3
"lib2","SARS-CoV-2","CTAATATTTTTAACAA",1,19.08,9.4,-1.43,0.15,2.05,1.07,0.01,">1 nonsynonymous","N13L T55I F160V",3
"lib2","SARS-CoV-2","CTAATCAAATTTAGAT",6,123.55,8.43,-2.41,0.1,2.28,1.09,0,">1 nonsynonymous","R73A A105M",2
"lib2","SARS-CoV-2","CTAATCAAGGGAACGC",2,12.22,7.87,-2.96,0.42,1.5,1.12,0.06,">1 nonsynonymous","N109Y V181T",2
"lib2","SARS-CoV-2","CTAATCAAGTTGACAT",1,20.91,10.73,-0.11,0.06,3,1.02,0,">1 nonsynonymous","Y35I Q163I",2
"lib2","SARS-CoV-2","CTAATCAATACCTTCA",4,16.81,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","T55G D112Y G152I",3
"lib2","SARS-CoV-2","CTAATCACAATCGTGG",2,1.16,NA,NA,NA,NA,NA,NA,"stop","A42* T55I",2
"lib2","SARS-CoV-2","CTAATCACATCGCACA",3,51.85,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","L5F N64L A81H D98Y S129G I142R",6
"lib2","SARS-CoV-2","CTAATCAGACCCTTAG",6,13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L5H S45F V182P",3
"lib2","SARS-CoV-2","CTAATCAGACTGGCGC",7,95.99,10.26,-0.58,0.04,2.87,1.1,0,">1 nonsynonymous","D75V I104L L122S L187M",4
"lib2","SARS-CoV-2","CTAATCAGACTGGCTG",8,141.43,6.14,-4.69,0.47,1.5,1.13,0.01,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","CTAATCAGGAAGTGGG",1,40.83,8.63,-2.21,0.13,2.25,1.08,0.01,">1 nonsynonymous","C6S T55H G152P",3
"lib2","SARS-CoV-2","CTAATCATATTAACCC",4,19.9,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","T3K E10F F44W Y93C E141V",5
"lib2","SARS-CoV-2","CTAATCCATCCTGCCG",3,1.52,NA,NA,NA,NA,NA,NA,"stop","N4T F99* V181A",3
"lib2","SARS-CoV-2","CTAATCCGAGAGGCAG",4,21.94,8.84,-2,0.08,2.18,1.02,0,">1 nonsynonymous","A18T V153L S164L G174K",4
"lib2","SARS-CoV-2","CTAATCCGGAGATTCT",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N V182T",2
"lib2","SARS-CoV-2","CTAATCCTGACGGAAC",10,1.45,NA,NA,NA,NA,NA,NA,"stop","A33P I88* L95P C150H",4
"lib2","SARS-CoV-2","CTAATCGAAAACCTGA",4,55.34,10.75,-0.08,0.05,2.97,1.06,0,">1 nonsynonymous","K56T V77L",2
"lib2","SARS-CoV-2","CTAATCGCATCATTAA",1,77.1,10.83,-0.01,0.06,3,1.03,0,"1 nonsynonymous","I138T",1
"lib2","SARS-CoV-2","CTAATCGGGGATAAAT",7,145.1,8.06,-2.78,0.16,1.97,1.12,0.01,">1 nonsynonymous","V37G L122Q C150L",3
"lib2","SARS-CoV-2","CTAATCGTACTGAAAC",9,39.45,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","T55I V103D P149R",3
"lib2","SARS-CoV-2","CTAATCGTCTTTGAGT",8,0.22,NA,NA,NA,NA,NA,NA,"stop","R16* P96* P161Y E186D P191S",5
"lib2","SARS-CoV-2","CTAATCGTGGAGATAA",19,356.09,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38S G155W T170E",3
"lib2","SARS-CoV-2","CTAATCTCACTCACCA",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V S43H P169V",3
"lib2","SARS-CoV-2","CTAATCTCAGGATAGT",2,8.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K114E R124T S147L",3
"lib2","SARS-CoV-2","CTAATCTCGTAAGCGA",4,56.76,6.36,-4.47,0.51,1.5,1.1,0.02,">1 nonsynonymous","D68E L95T",2
"lib2","SARS-CoV-2","CTAATCTGAATCGTAT",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K F12G Y121H S129T",4
"lib2","SARS-CoV-2","CTAATCTTATATTTAA",3,37.66,8.23,-2.6,0.1,1.96,1.08,0,">1 nonsynonymous","A105V S113G A190P K199L",4
"lib2","SARS-CoV-2","CTAATGAAAATTTTCC",3,16.11,6.65,-4.19,0.41,1.5,1.11,0.02,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","CTAATGAAACAATGTT",1,44.77,10.76,-0.07,0.1,2.84,1.16,0,"1 nonsynonymous","N4A",1
"lib2","SARS-CoV-2","CTAATGAATATTGTGC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib2","SARS-CoV-2","CTAATGACCTCTCATT",2,43.99,8.86,-1.98,0.08,2.93,1.04,0,">1 nonsynonymous","N4L Y119S T148L",3
"lib2","SARS-CoV-2","CTAATGAGAAACTTGC",7,1.74,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","CTAATGATCTCGAACT",2,129.5,10.39,-0.44,0.03,2.87,1.03,0,">1 nonsynonymous","L5W Y178S",2
"lib2","SARS-CoV-2","CTAATGATGGAAAACC",4,1.38,NA,NA,NA,NA,NA,NA,"stop","C6Y L38V D59H K94* L131T",5
"lib2","SARS-CoV-2","CTAATGCAATAAGTGT",9,98.35,10,-0.83,0.05,2.51,1.05,0,">1 nonsynonymous","K48R P96E V153I",3
"lib2","SARS-CoV-2","CTAATGCATTAGAACT",1,13.47,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N107W N118D Y165L",3
"lib2","SARS-CoV-2","CTAATGCCAAAAACCC",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K L162H T201V",3
"lib2","SARS-CoV-2","CTAATGCCTCCGAAAA",14,96.65,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C61S N92L",2
"lib2","SARS-CoV-2","CTAATGCGCTATACTT",4,75.84,10.8,-0.04,0.06,2.89,1.09,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","CTAATGCGTCCCACAG",4,26.43,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V65T V77S L122G G146V",4
"lib2","SARS-CoV-2","CTAATGCGTGTACACC",5,39.79,10.81,-0.03,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAATGCTCATATGTG",20,378.63,9.8,-1.03,0.06,2.1,1.06,0,">1 nonsynonymous","Y35S D90H",2
"lib2","SARS-CoV-2","CTAATGCTCTCTCCCC",5,31.36,9.77,-1.07,0.11,2.29,1.06,0.01,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","CTAATGCTTATTAGTT",8,97.17,7.75,-3.08,0.37,1.5,1.25,0.04,">1 nonsynonymous","C61G S108D K128Y",3
"lib2","SARS-CoV-2","CTAATGGCATCAACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A14L T85A Y93N A105D Y119* R127S S184C",7
"lib2","SARS-CoV-2","CTAATGGGTAACAAAT",3,2.8,NA,NA,NA,NA,NA,NA,"stop","N24F G83L W106* N120E P191K",5
"lib2","SARS-CoV-2","CTAATGGTGTTACGAT",2,21.45,7.57,-3.26,0.18,1.65,1.08,0.01,">1 nonsynonymous","A105F K114P",2
"lib2","SARS-CoV-2","CTAATGTAGTTCTAGT",4,36.44,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14F I28A G51N N107M K114E A190S",6
"lib2","SARS-CoV-2","CTAATGTATATATAGG",1,36.56,8.29,-2.55,0.1,2.67,1.04,0,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","CTAATGTATTTGAAGA",8,58.45,6.63,-4.21,0.4,1.5,1.2,0.03,">1 nonsynonymous","T100H W106N F134Y",3
"lib2","SARS-CoV-2","CTAATGTCAACGTAGA",3,119.64,10.97,0.13,0.06,2.93,1.08,0,">1 nonsynonymous","V37F N64G",2
"lib2","SARS-CoV-2","CTAATGTCCAGAAACT",2,27.21,10.84,0,0.07,2.98,1.03,0,"1 nonsynonymous","A192F",1
"lib2","SARS-CoV-2","CTAATGTCCCAATTGA",3,26.87,6.5,-4.33,0.6,1.5,1.25,0.06,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","CTAATGTCCGGGCGGA",4,81.85,7.53,-3.31,0.17,1.5,1.07,0.01,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","CTAATGTCCTGAAACT",2,33.46,10.78,-0.06,0.07,2.96,1.06,0,">1 nonsynonymous","D97L S129I",2
"lib2","SARS-CoV-2","CTAATGTGAGTCAACA",3,1.11,NA,NA,NA,NA,NA,NA,"stop","F8T V71*",2
"lib2","SARS-CoV-2","CTAATGTGCCCCAAAA",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y A190S",2
"lib2","SARS-CoV-2","CTAATGTTACAAATGT",9,0.53,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib2","SARS-CoV-2","CTAATTAAAAAAAAGG",1,12.5,9.63,-1.21,0.17,2.99,1.12,0.01,">1 nonsynonymous","R73A K128R",2
"lib2","SARS-CoV-2","CTAATTAACAGTACCT",6,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V C61G I72A E141T",4
"lib2","SARS-CoV-2","CTAATTAACTTTTTAA",1,13.56,6,-4.84,1.9,1.5,1.1,0.01,">1 nonsynonymous","Y21I S29L S129A Q168N",4
"lib2","SARS-CoV-2","CTAATTAAGACAAAGA",6,45.87,9.48,-1.35,0.09,1.72,1.15,0,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","CTAATTACAACCTTAA",4,14.65,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L57V I72D D98H",3
"lib2","SARS-CoV-2","CTAATTACATAACAAG",1,11.47,10.78,-0.06,0.07,2.92,1,0,">1 nonsynonymous","T15E G51R D90Q I138T H189N",5
"lib2","SARS-CoV-2","CTAATTACATGACGGC",21,263.63,10.74,-0.1,0.03,2.93,1.07,0,">1 nonsynonymous","S45H K56D S113A",3
"lib2","SARS-CoV-2","CTAATTACCCCCAGAT",9,115.98,10.63,-0.21,0.03,2.87,1.12,0,">1 nonsynonymous","A42Y D98N T201Y",3
"lib2","SARS-CoV-2","CTAATTACCGGCATCA",4,13.17,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I80P L122W S147A",3
"lib2","SARS-CoV-2","CTAATTACTAACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2G P7F N107T L131*",4
"lib2","SARS-CoV-2","CTAATTACTGAGGCTA",16,328.61,10.84,0,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAATTAGAAAGGGAC",4,32.01,9.28,-1.56,0.33,1.51,1.01,0.05,"1 nonsynonymous","K94D",1
"lib2","SARS-CoV-2","CTAATTAGGTATCGTT",14,62.14,6,-4.84,1.94,1.5,1.21,0.02,">1 nonsynonymous","Y93I I104W",2
"lib2","SARS-CoV-2","CTAATTAGTAACAAAA",12,183.74,9.41,-1.42,0.05,1.85,1.08,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","CTAATTAGTCTAGAAA",2,49.96,7.07,-3.76,0.14,1.5,1.06,0.01,">1 nonsynonymous","T15E K87C Y119R Q176L",4
"lib2","SARS-CoV-2","CTAATTATGCATTCAG",2,14.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95S C150V E154D",3
"lib2","SARS-CoV-2","CTAATTATGTCTATAA",25,134.5,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F44I P161H G196V",3
"lib2","SARS-CoV-2","CTAATTCAAGCACGTG",3,23.89,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V71S G146C",2
"lib2","SARS-CoV-2","CTAATTCAAGCATACA",7,60.98,8.43,-2.41,0.2,1.5,1.05,0.02,">1 nonsynonymous","F62D S69R K87V G155E",4
"lib2","SARS-CoV-2","CTAATTCATCCCGAAA",5,23.78,8.5,-2.34,0.21,2.76,1.19,0.02,">1 nonsynonymous","Y119C T170Q V173A",3
"lib2","SARS-CoV-2","CTAATTCCATGAGTAT",3,576.11,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S36F V37P C49R Y91R P133G E141M",6
"lib2","SARS-CoV-2","CTAATTCCGTTAAAGC",1,0.56,NA,NA,NA,NA,NA,NA,"stop","K94L F99* F156N",3
"lib2","SARS-CoV-2","CTAATTCCTACCCTTA",11,182.5,10.69,-0.15,0.02,2.94,1.06,0,">1 nonsynonymous","E10T I138V",2
"lib2","SARS-CoV-2","CTAATTCCTTTAGATA",5,77.97,6.32,-4.51,0.51,1.5,1.15,0.01,">1 nonsynonymous","Y35K S45P A67T",3
"lib2","SARS-CoV-2","CTAATTCCTTTAGGAT",1,9.96,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F17G Y91H N110I S139R",4
"lib2","SARS-CoV-2","CTAATTCGAACCAGCA",3,114.32,9.63,-1.2,0.06,2.23,1.03,0,">1 nonsynonymous","C6N D34R",2
"lib2","SARS-CoV-2","CTAATTCGGAGCGTCC",3,75.03,6.47,-4.36,0.32,1.5,1.27,0.01,">1 nonsynonymous","G51R C158G",2
"lib2","SARS-CoV-2","CTAATTCTCTTCATAA",8,44.81,8.41,-2.42,0.13,1.76,1.06,0,">1 nonsynonymous","L60S D112L S129A",3
"lib2","SARS-CoV-2","CTAATTCTGGTCGGAG",5,56.38,10.31,-0.52,0.07,2.79,1,0,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","CTAATTGAAACCCCCT",3,0.81,NA,NA,NA,NA,NA,NA,"stop","T63K C102E D112S Y121*",4
"lib2","SARS-CoV-2","CTAATTGAAAGCGCAG",5,191.71,6,-4.84,2,1.5,1.11,0,"1 nonsynonymous","P177F",1
"lib2","SARS-CoV-2","CTAATTGAAGATTAGC",1,31.05,10.7,-0.13,0.09,2.8,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAATTGACCATACCA",6,22.37,10.73,-0.11,0.06,2.95,1.01,0,">1 nonsynonymous","V32R T46S L188M",3
"lib2","SARS-CoV-2","CTAATTGACGTACCTA",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L V182G",2
"lib2","SARS-CoV-2","CTAATTGGATATATAC",4,16.95,9.56,-1.28,0.18,2.05,1,0.01,">1 nonsynonymous","V11D S41L",2
"lib2","SARS-CoV-2","CTAATTGGCTGACATG",5,62.11,8.34,-2.5,0.21,1.5,1.09,0.01,">1 nonsynonymous","V11D D97R R136T S164H",4
"lib2","SARS-CoV-2","CTAATTGTTAACAGAA",7,64.47,10.25,-0.59,0.08,2.67,1.04,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","CTAATTTAAATATAAA",5,34.62,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","CTAATTTCGATCTAAG",3,26.15,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N64K Q84N K94C R124G",4
"lib2","SARS-CoV-2","CTAATTTGATAGCAGT",3,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T F62L I72F N118H",4
"lib2","SARS-CoV-2","CTAATTTGCAATAAGC",3,6.5,6,-4.84,2,1.5,1.23,0.08,">1 nonsynonymous","F12Y N107D",2
"lib2","SARS-CoV-2","CTAATTTGCTCCAAAG",3,0.29,NA,NA,NA,NA,NA,NA,"stop","N151R T170I G172* F185S",4
"lib2","SARS-CoV-2","CTAATTTGGCAGAAAC",11,1.23,NA,NA,NA,NA,NA,NA,"stop","P169*",1
"lib2","SARS-CoV-2","CTAATTTGTGCGAATA",5,19.8,10.87,0.03,0.08,3,1.01,0,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","CTAATTTTACAACAAC",3,74.47,10.85,0.01,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAATTTTGGGCCACT",11,57.5,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S19E G51C T148E S200E",4
"lib2","SARS-CoV-2","CTAATTTTTAGACCGC",4,7.72,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1M A33T S41E S53W Y93K T100S",6
"lib2","SARS-CoV-2","CTACAAAAACAATAGT",1,15.56,9.28,-1.56,0.11,2.54,1.09,0.01,">1 nonsynonymous","Y39S E141W Y159H",3
"lib2","SARS-CoV-2","CTACAAAAACCTAAAA",1,46.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25D Y66T",2
"lib2","SARS-CoV-2","CTACAAAAACTTATTC",3,0.77,NA,NA,NA,NA,NA,NA,"stop","R27* D112* N157R",3
"lib2","SARS-CoV-2","CTACAAAAAGCATACC",5,50.8,10.19,-0.64,0.09,2.71,1.18,0,">1 nonsynonymous","D75T G83H",2
"lib2","SARS-CoV-2","CTACAAAAAGGTTTTA",12,43.86,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V77G A105V",2
"lib2","SARS-CoV-2","CTACAAAAGTAATTGA",30,1578.18,10.82,-0.02,0.04,2.97,1.05,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","CTACAAAATGCCAAAG",2,80.97,10.87,0.04,0.03,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACAAACATTAAATA",8,93.53,9.65,-1.18,0.05,2.12,1.06,0,">1 nonsynonymous","Y35A S45Y D97L A105W P149Y",5
"lib2","SARS-CoV-2","CTACAAACCGTTTGAC",12,18.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2S S45G K56Q E76Y G86F P96L",6
"lib2","SARS-CoV-2","CTACAAACCTTGCCAA",10,28.5,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","N1L T55F N107Y Y143D F185S",5
"lib2","SARS-CoV-2","CTACAAACGAGAGCCT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","S45C L95R R124H N171*",4
"lib2","SARS-CoV-2","CTACAAACTATATGAC",4,0.45,NA,NA,NA,NA,NA,NA,"stop","I28P K56V D68S T85* F99C",5
"lib2","SARS-CoV-2","CTACAAACTATGAACA",10,28.31,6.29,-4.54,0.43,1.5,1.1,0.01,">1 nonsynonymous","F99N D112H G146L",3
"lib2","SARS-CoV-2","CTACAAAGAAGCCACC",4,20.73,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V37K N92Y A105F",3
"lib2","SARS-CoV-2","CTACAAAGGCTTGACA",3,11.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E Q144K G152I T201N",4
"lib2","SARS-CoV-2","CTACAAATATAAAACG",7,71.7,6.24,-4.59,0.24,1.92,1.12,0,">1 nonsynonymous","A33H N107Y",2
"lib2","SARS-CoV-2","CTACAAATATAATTTA",10,174.55,6.19,-4.64,0.87,1.5,1.24,0.03,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","CTACAAATGATCTGCA",6,86.97,10.18,-0.65,0.07,2.68,1.04,0,">1 nonsynonymous","S41R C102I",2
"lib2","SARS-CoV-2","CTACAAATTGCGACCT",7,33.5,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P54G F70I P82N Y121N P149T T170P",6
"lib2","SARS-CoV-2","CTACAAATTTACCGCG",2,0.53,NA,NA,NA,NA,NA,NA,"stop","N40I G83C S113*",3
"lib2","SARS-CoV-2","CTACAACAAAGTTAAA",2,6.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y I72L T85L D98E",4
"lib2","SARS-CoV-2","CTACAACATTATTGCT",5,82.17,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2S V11H P161F",3
"lib2","SARS-CoV-2","CTACAACCAAAATCCA",9,227.03,10.64,-0.19,0.03,2.9,1.07,0,"1 nonsynonymous","Y178M",1
"lib2","SARS-CoV-2","CTACAACCATCACAAG",6,45.2,10.82,-0.02,0.08,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACAACCGACGCTTA",4,54.74,10.13,-0.71,0.03,2.89,1.05,0,">1 nonsynonymous","G116F S129I",2
"lib2","SARS-CoV-2","CTACAACGAAAACGGT",1,7.16,10.56,-0.28,0.08,2.95,1,0,">1 nonsynonymous","T3R G9T N40T",3
"lib2","SARS-CoV-2","CTACAACGAAAGTGAA",28,888.73,10.81,-0.02,0.04,2.93,1.08,0,">1 nonsynonymous","Y35F E141S T201L",3
"lib2","SARS-CoV-2","CTACAACGAAGTACCC",3,57.65,10.87,0.03,0.08,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACAACGGAATGCCC",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N F99M T170Y Y178T",4
"lib2","SARS-CoV-2","CTACAACGGAGTTAAT",1,20.77,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","T55S C102L V103L K198R",4
"lib2","SARS-CoV-2","CTACAACGTGGCGTCA",9,62.22,6,-4.84,2,1.5,1.21,0.02,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","CTACAACTAACGCGTT",1,13.96,9.41,-1.42,0.14,1.95,1.06,0.01,">1 nonsynonymous","F8G D97P",2
"lib2","SARS-CoV-2","CTACAACTAACTTATA",2,15.4,6.49,-4.35,0.99,1.5,1.15,0.06,">1 nonsynonymous","D68Y S139R T170L",3
"lib2","SARS-CoV-2","CTACAACTTTAAATGG",3,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84V A89Y G101L G116N Y123A G146I T170F",7
"lib2","SARS-CoV-2","CTACAACTTTTATAAA",4,155.88,10.74,-0.09,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CTACAAGAATCCCTGA",13,319.84,10.37,-0.47,0.03,2.91,1.03,0,">1 nonsynonymous","L122D K128V",2
"lib2","SARS-CoV-2","CTACAAGATAAATTTT",1,21.14,10.75,-0.08,0.08,2.86,1.12,0,"1 nonsynonymous","S19P",1
"lib2","SARS-CoV-2","CTACAAGATAGTATAT",2,37.68,10.65,-0.19,0.05,2.96,1.04,0,">1 nonsynonymous","K132Y Q163C",2
"lib2","SARS-CoV-2","CTACAAGCACCAGCAC",8,189.09,9.95,-0.89,0.06,2.55,1.03,0,">1 nonsynonymous","L57N P149V T201S",3
"lib2","SARS-CoV-2","CTACAAGCCTGGACGA",16,184.64,10.29,-0.54,0.04,2.83,1.07,0,">1 nonsynonymous","V37E G116S L122I P149S",4
"lib2","SARS-CoV-2","CTACAAGCGACTAAAT",3,18.5,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","N4I F12S K94N G117S",4
"lib2","SARS-CoV-2","CTACAAGGCGCCCCCC",3,149.04,10.82,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACAAGGCTGAAGAC",11,77.24,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","Y50P Y123H C150S",3
"lib2","SARS-CoV-2","CTACAAGTATACGAAC",10,128.01,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I28W G51M G86C L95I E141T",5
"lib2","SARS-CoV-2","CTACAAGTCATCTTCG",13,26.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15N I104R N120W F134S T193I",5
"lib2","SARS-CoV-2","CTACAAGTTCAGATAC",2,20,8.82,-2.02,0.12,3,1.1,0.01,">1 nonsynonymous","G9W Y119M I142L G166M",4
"lib2","SARS-CoV-2","CTACAAGTTGCAGAAT",4,60.43,10.29,-0.54,0.03,2.85,1.04,0,"1 nonsynonymous","K94Q",1
"lib2","SARS-CoV-2","CTACAATAAACCACTT",5,30.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5T R27K L95H S164R",4
"lib2","SARS-CoV-2","CTACAATAAATAATGA",6,65.58,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14K L38Y V77K A89S F134S Q163R",6
"lib2","SARS-CoV-2","CTACAATAAGCAGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6G V11N K56* V181H T201L",5
"lib2","SARS-CoV-2","CTACAATAATGCTTAC",2,112.35,9.4,-1.44,0.12,2.41,1.04,0.01,">1 nonsynonymous","G9K G74C",2
"lib2","SARS-CoV-2","CTACAATACCTGAAAT",3,45.33,10.19,-0.65,0.08,2.7,1.11,0,">1 nonsynonymous","V37C D90N K132I K199T",4
"lib2","SARS-CoV-2","CTACAATACTCGTATT",7,129.21,10.49,-0.35,0.04,2.98,1.04,0,">1 nonsynonymous","N58R F62L T201P",3
"lib2","SARS-CoV-2","CTACAATAGATACTTT",2,11.12,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C31I D75K V103K V153S",4
"lib2","SARS-CoV-2","CTACAATAGTCTATGA",2,6.91,9.27,-1.57,0.28,1.94,1.03,0.03,">1 nonsynonymous","R16T A33P K48N Q79R",4
"lib2","SARS-CoV-2","CTACAATGGATTTGAA",5,26.66,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V11H V182R",2
"lib2","SARS-CoV-2","CTACAATGTATAAAAC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib2","SARS-CoV-2","CTACAATGTATAAGAG",3,44.44,10.84,0,0.08,2.89,1.14,0,">1 nonsynonymous","P54A C61E",2
"lib2","SARS-CoV-2","CTACAATTACTAGCGG",4,140.02,8.66,-2.18,0.06,2.94,1.07,0,"1 nonsynonymous","Y159V",1
"lib2","SARS-CoV-2","CTACAATTATTCACCG",2,11.27,10.24,-0.6,0.1,2.8,1.11,0,">1 nonsynonymous","N4L G166N",2
"lib2","SARS-CoV-2","CTACAATTGTCACACG",13,235.25,10.44,-0.4,0.04,2.92,1.08,0,"1 nonsynonymous","Y123A",1
"lib2","SARS-CoV-2","CTACAATTTTATTGTG",1,27.92,10.29,-0.55,0.1,2.81,1.15,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","CTACACAAAAAATTTC",8,105.82,10.77,-0.07,0.04,2.89,1.13,0,"1 nonsynonymous","N130T",1
"lib2","SARS-CoV-2","CTACACAAAAATGAAT",12,237.66,10.38,-0.46,0.04,2.87,1.05,0,">1 nonsynonymous","L95C H189D",2
"lib2","SARS-CoV-2","CTACACAAAGACATCG",4,42.2,10.85,0.02,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACACAACCAATTAT",11,266.11,9.75,-1.08,0.03,2.8,1.06,0,">1 nonsynonymous","D34T F156R",2
"lib2","SARS-CoV-2","CTACACAACCTGGGAG",2,51.41,10.9,0.06,0.08,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACACAAGACTCAAA",3,162.49,9.74,-1.09,0.08,2,1.05,0,">1 nonsynonymous","L60A V77R S129D",3
"lib2","SARS-CoV-2","CTACACACAGTGAAAA",4,23.39,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","I28P G51T W106R Y121F",4
"lib2","SARS-CoV-2","CTACACACATAACATA",9,25.04,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A14G P82W N92F",3
"lib2","SARS-CoV-2","CTACACACCTTTAATA",21,221.86,10.88,0.04,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACACAGTAGAAATC",2,11.83,9.52,-1.32,0.08,1.94,1.01,0,"1 nonsynonymous","F12G",1
"lib2","SARS-CoV-2","CTACACAGTCATAATA",3,9.79,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","W106G G146R S184A",3
"lib2","SARS-CoV-2","CTACACATACGAATAG",2,72.11,9.38,-1.46,0.1,2.32,1.07,0,">1 nonsynonymous","C6A A22S R78T S147Y",4
"lib2","SARS-CoV-2","CTACACATCGGAGGAA",5,19.71,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","A42R G86K Y93C",3
"lib2","SARS-CoV-2","CTACACATTTTTTCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N N107P N120T T140R",4
"lib2","SARS-CoV-2","CTACACCACAACTAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50V T100R P133*",3
"lib2","SARS-CoV-2","CTACACCCACGAGCAT",20,344.65,10.75,-0.08,0.04,2.93,1.09,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","CTACACCGGAAGAGAT",7,64.52,6.15,-4.68,0.47,1.5,1.09,0.01,">1 nonsynonymous","A22L F126G E141R",3
"lib2","SARS-CoV-2","CTACACCTACAACCTA",1,6.85,8.29,-2.54,0.27,1.86,1.04,0.03,">1 nonsynonymous","F44N T55P G83T",3
"lib2","SARS-CoV-2","CTACACCTCAGACGAA",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S Q84K D112W N130F T148P",5
"lib2","SARS-CoV-2","CTACACCTGTAATCAA",6,33.12,10.46,-0.38,0.06,2.88,1.03,0,">1 nonsynonymous","L5S F44S",2
"lib2","SARS-CoV-2","CTACACGACCTCAATT",9,44.21,6,-4.84,2,1.51,1.13,0.01,">1 nonsynonymous","V77E W106K Y143L",3
"lib2","SARS-CoV-2","CTACACGCCATTAGTA",6,54.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4C E10K Y35R Y93S",4
"lib2","SARS-CoV-2","CTACACGGAACCCGTA",6,12.94,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","N4T G86V D97M L122M",4
"lib2","SARS-CoV-2","CTACACGGTAATGTTT",16,121.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N D68V N107Q",3
"lib2","SARS-CoV-2","CTACACGTTTGTAGAA",10,77.97,10.44,-0.39,0.03,2.85,1.13,0,">1 nonsynonymous","A14K K114N",2
"lib2","SARS-CoV-2","CTACACTAAACAAGAA",10,8.25,NA,NA,NA,NA,NA,NA,"stop","I2Y F12S T63*",3
"lib2","SARS-CoV-2","CTACACTTAAGGCTAA",5,54.9,10.66,-0.17,0.05,2.86,1.15,0,"1 nonsynonymous","Y121H",1
"lib2","SARS-CoV-2","CTACAGAAAGGAGGCT",1,8.58,10.59,-0.25,0.11,3,1,0,"1 nonsynonymous","F156I",1
"lib2","SARS-CoV-2","CTACAGACAATATGTA",7,100.62,10.92,0.09,0.06,2.86,1.12,0,">1 nonsynonymous","V37T T201S",2
"lib2","SARS-CoV-2","CTACAGACACTCCCAT",3,39.94,10.78,-0.05,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACAGACTAAAAATA",8,110.49,9.16,-1.68,0.1,2.07,1.08,0,"1 nonsynonymous","Y121E",1
"lib2","SARS-CoV-2","CTACAGATATACCCCC",2,151.54,10.82,-0.02,0.03,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CTACAGATGGTCTGAG",1,7.21,6.32,-4.52,0.74,1.5,1.12,0.02,">1 nonsynonymous","C6W Y35K N107S",3
"lib2","SARS-CoV-2","CTACAGCAGGTCCTCC",1,8.26,10.73,-0.11,0.11,2.72,1.28,0.01,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","CTACAGCTAAATCTCT",4,18.27,10.14,-0.7,0.08,2.89,1.03,0,">1 nonsynonymous","E141T G152V",2
"lib2","SARS-CoV-2","CTACAGGCTATCAACT",3,57.91,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","D75T Y159D Y165S",3
"lib2","SARS-CoV-2","CTACAGGCTCCCCTCT",2,65.88,10.34,-0.5,0.04,3,1.01,0,">1 nonsynonymous","I2M V77L Q84M G116Y",4
"lib2","SARS-CoV-2","CTACAGGGAATCGCGT",5,69.3,10.66,-0.17,0.05,2.89,1.12,0,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","CTACAGGGTAAACGGG",2,33.42,8.04,-2.79,0.37,1.5,1.17,0.06,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","CTACAGGTAAATTTGC",2,17.25,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","I80A Y119F P169Q V173C",4
"lib2","SARS-CoV-2","CTACAGGTTAGAGTTT",3,10.44,6,-4.84,1.01,1.5,1.1,0.01,">1 nonsynonymous","Y50S D98R Y143M",3
"lib2","SARS-CoV-2","CTACAGTAATATACGT",5,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129R S200D",2
"lib2","SARS-CoV-2","CTACAGTAGGACACGC",1,43.21,10.82,-0.02,0.05,2.94,1.04,0,">1 nonsynonymous","T3S K56G",2
"lib2","SARS-CoV-2","CTACAGTCCAACTTTC",6,6.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136G V173P",2
"lib2","SARS-CoV-2","CTACATAACATGAGCA",8,147.28,6,-4.84,1.81,1.5,1.17,0.01,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","CTACATACAAATATTA",7,43.79,8.5,-2.33,0.12,1.57,1.04,0.01,"1 nonsynonymous","G86E",1
"lib2","SARS-CoV-2","CTACATACAGCTACCG",11,100.91,6,-4.84,1.47,1.5,1.1,0,">1 nonsynonymous","S36N G51A E154C P169S L183W",5
"lib2","SARS-CoV-2","CTACATACCAACAATG",7,24.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10C C61Y D98L E135S G146C Y165Q G174M T201M",8
"lib2","SARS-CoV-2","CTACATACTATGTGGA",6,114.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y39F R127P G146T",3
"lib2","SARS-CoV-2","CTACATAGAAAAATCA",4,1.1,NA,NA,NA,NA,NA,NA,"stop","V37* N118G P133I T148I",4
"lib2","SARS-CoV-2","CTACATAGACTTCATT",16,254.05,10.4,-0.43,0.03,2.92,1.04,0,">1 nonsynonymous","S29H T63H I142F",3
"lib2","SARS-CoV-2","CTACATAGCGACTCTG",1,25.36,6,-4.84,2,3,1.18,0,">1 nonsynonymous","P82T K94M F99T V103M",4
"lib2","SARS-CoV-2","CTACATAGCTTTTCGG",3,43.31,9.73,-1.1,0.08,2.38,1.03,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","CTACATAGGAGTTTAA",1,20.25,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V11M S19A N92Q V103L",4
"lib2","SARS-CoV-2","CTACATAGTTAGTCTA",5,15.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G Y35R S41Y N64S A81L Y119A Q176L",7
"lib2","SARS-CoV-2","CTACATATAATTTGTA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q T100V",2
"lib2","SARS-CoV-2","CTACATATTTGTTAGG",5,44.64,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G83A L95R I104K L122P K128S K199I",6
"lib2","SARS-CoV-2","CTACATATTTTAATTT",5,63.91,6.45,-4.38,0.58,1.5,1.26,0.02,">1 nonsynonymous","S36I L122P",2
"lib2","SARS-CoV-2","CTACATCAAAAACACT",3,8.1,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y21R G86L E141I",3
"lib2","SARS-CoV-2","CTACATCAAACAATCT",12,180.06,9.81,-1.02,0.08,2.4,1.05,0,">1 nonsynonymous","C6A F62K",2
"lib2","SARS-CoV-2","CTACATCAAACTGAAA",2,41.56,10.72,-0.11,0.04,2.96,1.05,0,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","CTACATCAAATCCAGC",1,7.18,9.19,-1.64,0.13,2.19,1.04,0.01,">1 nonsynonymous","T46H Q84P",2
"lib2","SARS-CoV-2","CTACATCAATATCTAC",1,20.73,10.83,-0.01,0.06,2.88,1.15,0,">1 nonsynonymous","D98A P197I",2
"lib2","SARS-CoV-2","CTACATCATCTCCAAC",4,24.83,8.2,-2.64,0.24,1.58,1.1,0.02,">1 nonsynonymous","V32K E135G P149H G155V",4
"lib2","SARS-CoV-2","CTACATCATTAAAAAT",2,31.58,9.61,-1.22,0.06,1.89,1.12,0,">1 nonsynonymous","N24A K94G",2
"lib2","SARS-CoV-2","CTACATCCACCCCTAA",10,113.02,9.85,-0.98,0.04,2.15,1.03,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","CTACATCCAGAAAAGT",2,7.87,6.49,-4.34,0.79,1.5,1,0.06,">1 nonsynonymous","T85G L95K T201R",3
"lib2","SARS-CoV-2","CTACATCCCGGTCTCG",7,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F D68T G166D",3
"lib2","SARS-CoV-2","CTACATCCGAAGCCGA",3,20.65,10.51,-0.32,0.08,2.97,1.03,0,">1 nonsynonymous","L60R S129I",2
"lib2","SARS-CoV-2","CTACATCGACTATAAC",3,18,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44L T85M S113R L131N I142M G155D",6
"lib2","SARS-CoV-2","CTACATCGCATATTTC",3,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V C102S",2
"lib2","SARS-CoV-2","CTACATCTTACGTAAT",1,141.47,10.86,0.02,0.05,2.99,1.04,0,">1 nonsynonymous","R27S S53E T148L",3
"lib2","SARS-CoV-2","CTACATGAAAAGTATC",2,30.63,8.75,-2.08,0.13,2.77,1.06,0.01,">1 nonsynonymous","T15Q N64M G166T",3
"lib2","SARS-CoV-2","CTACATGAATACGTCG",4,74.36,10.09,-0.75,0.08,2.52,1.03,0,">1 nonsynonymous","E10S N24T V37G V52A S113A",5
"lib2","SARS-CoV-2","CTACATGCTCCATGGA",3,0.09,NA,NA,NA,NA,NA,NA,"stop","V32W Y91* T140A N151F Y175* V180E",6
"lib2","SARS-CoV-2","CTACATGTCCATTGTT",7,50.91,10.73,-0.11,0.05,2.85,1.14,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","CTACATGTGGCCCCCT",1,0.71,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTACATGTTTGTCGTT",4,11.87,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L95T G117L R127L",3
"lib2","SARS-CoV-2","CTACATTAAAACCAGC",11,102.12,10.64,-0.19,0.02,2.97,1.05,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","CTACATTAAAGGAACC",3,40.07,10.86,0.02,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACATTCCAACCATA",3,19.37,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y91L A105P Y123I S129I",4
"lib2","SARS-CoV-2","CTACATTTAAAACAAG",8,86.15,6,-4.84,2,3,1.15,0,">1 nonsynonymous","E10V R124Q G174A",3
"lib2","SARS-CoV-2","CTACATTTCCGCGAGC",2,40.56,10.13,-0.71,0.06,2.29,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","CTACATTTCGTGCAAT",2,15.06,10.66,-0.17,0.06,3,1.02,0,"1 nonsynonymous","T148W",1
"lib2","SARS-CoV-2","CTACATTTCTGTTTAG",2,27.43,10.89,0.06,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACATTTTAAAGCTT",8,133.33,8.76,-2.07,0.05,2.73,1.1,0,">1 nonsynonymous","D90G Y119N A192S",3
"lib2","SARS-CoV-2","CTACCAAAAGCCGTGT",2,13.54,9.14,-1.69,0.1,2.87,1.12,0.01,">1 nonsynonymous","G166W P191N",2
"lib2","SARS-CoV-2","CTACCAAAATATCGAC",1,57.73,10.47,-0.37,0.05,2.9,1.01,0,">1 nonsynonymous","T15Y D59E",2
"lib2","SARS-CoV-2","CTACCAAACTTCACGT",9,104.83,6.33,-4.5,0.35,1.5,1.16,0.01,">1 nonsynonymous","Y119T N157K",2
"lib2","SARS-CoV-2","CTACCAAATACCGCAA",9,91.01,8.72,-2.12,0.16,1.67,1.11,0.01,">1 nonsynonymous","K48A N64S Y123E T140A",4
"lib2","SARS-CoV-2","CTACCAAATCAATGGC",6,51.28,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Q84K K87S A105K K114Q N118L R127A",6
"lib2","SARS-CoV-2","CTACCAAATCTGTAAC",1,23.76,6.51,-4.32,0.36,1.5,1.14,0.01,">1 nonsynonymous","F70V A89L Y143H",3
"lib2","SARS-CoV-2","CTACCAACAAGCTAAA",3,7.8,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","V52W N58M Q84N R179S",4
"lib2","SARS-CoV-2","CTACCAACAGTAGAAA",12,64.39,6.03,-4.81,0.58,1.5,1.21,0.01,">1 nonsynonymous","V37G D97I F126V P133V Y143L L162W V182Y",7
"lib2","SARS-CoV-2","CTACCAACATTACTAG",1,23.39,6,-4.84,1.71,1.5,1.13,0.03,">1 nonsynonymous","N1E P82D Y119S",3
"lib2","SARS-CoV-2","CTACCAACCAGCAAAT",6,130.09,10.21,-0.62,0.02,2.88,1.05,0,"1 nonsynonymous","C31S",1
"lib2","SARS-CoV-2","CTACCAACGATGAATC",19,419.41,8.85,-1.99,0.05,2.86,1.08,0,">1 nonsynonymous","P7C A42R G146E",3
"lib2","SARS-CoV-2","CTACCAACTATGCCAT",3,5.05,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","S45A W106M S113A S147C P161R",5
"lib2","SARS-CoV-2","CTACCAACTGAAAGTT",1,1.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1A",1
"lib2","SARS-CoV-2","CTACCAAGAAATAGCA",9,102.08,10.94,0.1,0.05,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CTACCAAGACTAAACA",7,2.31,NA,NA,NA,NA,NA,NA,"stop","N24Q D90I Y119*",3
"lib2","SARS-CoV-2","CTACCAAGAGTATGCT",2,20.34,9.57,-1.26,0.28,1.68,1.12,0.05,">1 nonsynonymous","A105L A192T",2
"lib2","SARS-CoV-2","CTACCAAGCATCGACA",5,44.83,10.85,0.02,0.05,2.95,1,0,"1 nonsynonymous","T140A",1
"lib2","SARS-CoV-2","CTACCAAGCCATAAAC",1,19.7,10.95,0.11,0.07,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACCAAGGCCCTTGA",7,56.25,10.76,-0.08,0.05,2.97,1.06,0,">1 nonsynonymous","N40T D98N",2
"lib2","SARS-CoV-2","CTACCAATGCGAATAC",8,35.71,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A22T G83S D90Y N107V",4
"lib2","SARS-CoV-2","CTACCAATGGGCACCT",2,43.68,10.25,-0.58,0.04,2.89,1.03,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","CTACCACAAATATATA",1,17.9,8.67,-2.16,0.11,3,1.02,0,">1 nonsynonymous","I2D T46N S164K Y175S",4
"lib2","SARS-CoV-2","CTACCACACGTACTTA",9,142.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4E K87S S108K V173S",4
"lib2","SARS-CoV-2","CTACCACCTAAAGTAT",18,3.35,NA,NA,NA,NA,NA,NA,"stop","A33* V37S A67T N110I",4
"lib2","SARS-CoV-2","CTACCACTAGCTGGCA",7,71.42,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L38V C49V Y165K K198D",4
"lib2","SARS-CoV-2","CTACCACTGGAACCGA",9,156.48,10.27,-0.57,0.05,2.78,1.04,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","CTACCAGACCCTCCAT",10,31.3,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103L V182G",2
"lib2","SARS-CoV-2","CTACCAGCTTTAAGAT",22,117.94,6,-4.84,2,3,1.25,0,">1 nonsynonymous","C6S F17E W106N T201M",4
"lib2","SARS-CoV-2","CTACCAGGATAAGGAG",2,79.95,7.69,-3.15,0.14,1.5,1.08,0.01,">1 nonsynonymous","F8Q N118T",2
"lib2","SARS-CoV-2","CTACCATAAGCCCGCA",4,14.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N30L S113Q E141T N157V G174V L188S",6
"lib2","SARS-CoV-2","CTACCATAAGTTTCGA",10,0.54,NA,NA,NA,NA,NA,NA,"stop","Y39S L60*",2
"lib2","SARS-CoV-2","CTACCATACCAGTGGA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","V65A T140* Q176H",3
"lib2","SARS-CoV-2","CTACCATATAAAGGTA",3,6.63,NA,NA,NA,NA,NA,NA,"stop","K26* S129L",2
"lib2","SARS-CoV-2","CTACCATCATAATGAA",7,73.79,10.89,0.06,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACCATGAACATGCA",3,27.19,10.81,-0.02,0.07,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACCATTGCTCGATA",2,15.81,9.6,-1.23,0.12,1.95,1,0.01,">1 nonsynonymous","E10S S41I S139V",3
"lib2","SARS-CoV-2","CTACCATTTAATCGAC",5,26.31,6.25,-4.59,0.35,3,1.2,0.01,">1 nonsynonymous","L5A T15H G86R K94S T148M P161L H189Y T201Y",8
"lib2","SARS-CoV-2","CTACCCAACGTGCTCA",3,18.07,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C6R G83V A105E L122P P149C",5
"lib2","SARS-CoV-2","CTACCCAAGTTCTTCA",1,12.55,8.58,-2.26,0.29,1.5,1,0.01,">1 nonsynonymous","N4S L60A D68T S129G",4
"lib2","SARS-CoV-2","CTACCCAATACTGACA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","R25*",1
"lib2","SARS-CoV-2","CTACCCACAGTACAAT",1,7.04,10.13,-0.71,0.1,2.89,1,0.01,">1 nonsynonymous","K87R D98F S164M T201M",4
"lib2","SARS-CoV-2","CTACCCACGCTCGATA",2,0.9,NA,NA,NA,NA,NA,NA,"stop","C61* S69Q A89S F99Y",4
"lib2","SARS-CoV-2","CTACCCACTCATAGTG",3,60.69,9.77,-1.06,0.08,2.53,1.08,0,">1 nonsynonymous","F134E E154C",2
"lib2","SARS-CoV-2","CTACCCAGCAACGCGT",1,24.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R136G G152P",2
"lib2","SARS-CoV-2","CTACCCATAAAAATAG",3,67.96,10.82,-0.01,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACCCATACCAAGGT",5,17.25,7.23,-3.6,0.35,1.5,1.03,0.03,">1 nonsynonymous","C31Y W106A Y119M Y143K",4
"lib2","SARS-CoV-2","CTACCCCAACTTCCCT",1,26.13,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","E10K S19T C158F S200L",4
"lib2","SARS-CoV-2","CTACCCCCAGCGAGGG",12,67.61,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","G86N N120K T148S P161M",4
"lib2","SARS-CoV-2","CTACCCGATATAATAC",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11N F156S",2
"lib2","SARS-CoV-2","CTACCCGCCAGATCAA",8,109.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64K F70T K94E N109V G166S",5
"lib2","SARS-CoV-2","CTACCCGTCCCCCATG",6,0,NA,NA,NA,NA,NA,NA,"stop","V37S P133L Y143F T201*",4
"lib2","SARS-CoV-2","CTACCCTAACACCTCA",5,34.11,6,-4.84,1.44,1.5,1.21,0.01,">1 nonsynonymous","F44R Y143I V180H",3
"lib2","SARS-CoV-2","CTACCCTCACTCGCAC",6,56.48,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K26R F62A I88D",3
"lib2","SARS-CoV-2","CTACCCTGTTCGAAAC",2,67.93,9.49,-1.35,0.12,1.79,1.08,0,">1 nonsynonymous","P7I V11R",2
"lib2","SARS-CoV-2","CTACCCTTCCCTTTAA",4,0.17,NA,NA,NA,NA,NA,NA,"stop","N40* W106R S129F",3
"lib2","SARS-CoV-2","CTACCCTTTCCATGGC",2,20.64,10.5,-0.33,0.06,2.83,1.13,0,">1 nonsynonymous","N4T Y35S D90N",3
"lib2","SARS-CoV-2","CTACCGACGAATTTGA",10,60.09,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A22E V52S Q84P A105Y",4
"lib2","SARS-CoV-2","CTACCGACTATCATGC",1,38.24,10.54,-0.3,0.08,2.81,1,0,">1 nonsynonymous","A14I T46N Q168Y",3
"lib2","SARS-CoV-2","CTACCGATGCAATCTA",1,73.73,10.78,-0.06,0.04,2.94,1.07,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","CTACCGCAAAACCTAG",5,4.56,NA,NA,NA,NA,NA,NA,"stop","F12* K56D L60Q Y119G E135L Q168T",6
"lib2","SARS-CoV-2","CTACCGCGTAAGAACC",2,22.75,10.13,-0.71,0.13,2.85,1.17,0.02,"wildtype","",0
"lib2","SARS-CoV-2","CTACCGGACCAATACA",1,29.42,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S19F N64L I80M D98T K128F",5
"lib2","SARS-CoV-2","CTACCGGCAAAATAAC",6,103.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G101W F126S S139N Y175R",4
"lib2","SARS-CoV-2","CTACCGGCATCTTTAC",4,149.62,9.9,-0.94,0.04,2.9,1.06,0,">1 nonsynonymous","K87S D90C",2
"lib2","SARS-CoV-2","CTACCGTATTCTAGAC",3,1.43,NA,NA,NA,NA,NA,NA,"stop","N151I C158*",2
"lib2","SARS-CoV-2","CTACCGTCACCGCTAG",2,28.67,10.84,0,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACCGTCACTCTTGA",6,77.75,10.33,-0.5,0.03,2.92,1.03,0,">1 nonsynonymous","A14R Y35L T85L",3
"lib2","SARS-CoV-2","CTACCGTTGGATAAAA",6,40.97,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F47S Q84L R136W",3
"lib2","SARS-CoV-2","CTACCTAAACCTGTAA",4,66.26,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S41P R127P",2
"lib2","SARS-CoV-2","CTACCTAAGTTAGGTC",5,142.33,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N4I D97R G155Y V173S P177R",5
"lib2","SARS-CoV-2","CTACCTACCGAGGTAC",3,56.26,9.43,-1.41,0.1,1.95,1.07,0,">1 nonsynonymous","G83V G116D S129I",3
"lib2","SARS-CoV-2","CTACCTATAACGAAAA",1,18.67,9.35,-1.48,0.22,1.74,1.11,0.02,">1 nonsynonymous","G9L S41P W106T",3
"lib2","SARS-CoV-2","CTACCTATACTTCGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N30W Q144R N157* G166K",4
"lib2","SARS-CoV-2","CTACCTATCCACTTGG",6,2.59,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib2","SARS-CoV-2","CTACCTATTTCAAACA",3,8.79,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","N13T V52T Q176L",3
"lib2","SARS-CoV-2","CTACCTCCTGCTTGCA",1,11.69,9.76,-1.07,0.17,2.27,1.02,0.01,">1 nonsynonymous","F47R G155N K198N",3
"lib2","SARS-CoV-2","CTACCTCTCGAAATGC",17,261.94,10.65,-0.18,0.03,2.96,1.05,0,">1 nonsynonymous","Y35A Y39P F44V",3
"lib2","SARS-CoV-2","CTACCTGAAAGCATAT",1,51.84,10.69,-0.14,0.06,2.89,1.09,0,"1 nonsynonymous","N120V",1
"lib2","SARS-CoV-2","CTACCTTAACGATACC",6,53.3,6.29,-4.55,0.4,1.5,1.12,0.01,">1 nonsynonymous","I2G A14I C61K Y123C L131V",5
"lib2","SARS-CoV-2","CTACCTTATTACATTT",17,337.1,9.45,-1.39,0.03,2.95,1.08,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","CTACGAAACAGGATGG",2,29.42,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A33L F62H I88A G166K T201L",5
"lib2","SARS-CoV-2","CTACGAAATTGTCCAA",5,80.27,9.31,-1.53,0.13,1.85,1.15,0.01,">1 nonsynonymous","N4P F99L F156L",3
"lib2","SARS-CoV-2","CTACGAACATGGGATA",1,20.16,10.78,-0.06,0.11,2.73,1.28,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGAACTATTCCTC",1,15.94,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G51T D112S P161T",3
"lib2","SARS-CoV-2","CTACGAAGACTGTATA",11,58.45,7.34,-3.49,0.37,1.5,1.09,0.05,">1 nonsynonymous","S19K S108V T148N",3
"lib2","SARS-CoV-2","CTACGAAGGAAGATTT",2,23.85,10.12,-0.71,0.07,2.86,1.07,0,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","CTACGAAGTACAATTT",10,57.27,9.06,-1.78,0.21,1.5,1.02,0.02,">1 nonsynonymous","V11L N92G T201K",3
"lib2","SARS-CoV-2","CTACGAAGTTTCTAAA",2,1.42,NA,NA,NA,NA,NA,NA,"stop","S41G R124* G155E",3
"lib2","SARS-CoV-2","CTACGAATAAAGGTAG",4,16.54,8.03,-2.81,0.28,1.73,1.16,0.02,">1 nonsynonymous","D34N A67S T85N D90R",4
"lib2","SARS-CoV-2","CTACGACAAAATTAAT",12,202.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12G R127C F160M",3
"lib2","SARS-CoV-2","CTACGACACTATATCA",6,75.72,10.83,0,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGACCAAACACAA",2,9.84,8.39,-2.44,0.39,1.58,1,0.05,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","CTACGACGTTAGCTCA",2,1.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58Y",1
"lib2","SARS-CoV-2","CTACGACTAACTTACA",5,59.48,10.29,-0.55,0.06,2.94,1.02,0,">1 nonsynonymous","S29K T55S F185Y",3
"lib2","SARS-CoV-2","CTACGACTGATGGCAC",3,31.34,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N4A V77P E135T F160D",4
"lib2","SARS-CoV-2","CTACGAGACTACATCT",2,5.64,NA,NA,NA,NA,NA,NA,"stop","L5I R27* Y159H G172P A192T",5
"lib2","SARS-CoV-2","CTACGAGCCGTTAAAA",3,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","CTACGAGCGATACGAC",1,88.97,10.67,-0.17,0.03,2.92,1.07,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","CTACGAGCTGGGACTA",11,0.27,NA,NA,NA,NA,NA,NA,"stop","F8* Y39M I80G Y121*",4
"lib2","SARS-CoV-2","CTACGAGGATAGACTT",15,84.65,6,-4.84,2,3,1.11,0,">1 nonsynonymous","E10V D59T N107R C158D",4
"lib2","SARS-CoV-2","CTACGAGGTATTGGGG",4,77.76,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3N K114N N120T G172I",4
"lib2","SARS-CoV-2","CTACGATAGTGAGTGA",10,44.3,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T3L G101L",2
"lib2","SARS-CoV-2","CTACGATATGGAGTTA",3,6.29,NA,NA,NA,NA,NA,NA,"stop","I2S G83* R127N S139V L187T",5
"lib2","SARS-CoV-2","CTACGATCCAAAAAAG",2,21.57,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G9E S19L V37L G101T I138L",5
"lib2","SARS-CoV-2","CTACGATGGGATCACT",3,36.33,10.8,-0.04,0.04,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGATTTTGCGTTT",7,236.29,10.41,-0.43,0.02,2.93,1.04,0,">1 nonsynonymous","T63N A89T",2
"lib2","SARS-CoV-2","CTACGCAACTGGACCG",3,16.52,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I2A Y35S G86Y T201H",4
"lib2","SARS-CoV-2","CTACGCAGAAAAGGTA",7,88.02,10.85,0.01,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGCAGTCCGAACA",4,18.23,9.19,-1.64,0.14,2.82,1.03,0.01,">1 nonsynonymous","L57C K87H F156K K198R",4
"lib2","SARS-CoV-2","CTACGCCCACTGCATT",2,13.95,10.47,-0.37,0.12,2.88,1.12,0.01,">1 nonsynonymous","L122F T140W T148S V173M",4
"lib2","SARS-CoV-2","CTACGCCGACATAAAC",9,66.85,6,-4.84,0.53,1.5,1.13,0,">1 nonsynonymous","Y35R A42V D97Y D98R R136A Q144L V173E",7
"lib2","SARS-CoV-2","CTACGCGTTAAATACG",4,76.24,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K87S N92K",2
"lib2","SARS-CoV-2","CTACGCGTTTTATCCA",7,123.19,9.78,-1.06,0.06,2.14,1.08,0,">1 nonsynonymous","N24L F62S N120R",3
"lib2","SARS-CoV-2","CTACGCTAAATAGACA",1,53.31,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L38R C49T T63I K94V Y119W",5
"lib2","SARS-CoV-2","CTACGCTAATCATACT",1,20.37,10.94,0.11,0.08,2.89,1.07,0,"1 nonsynonymous","K198F",1
"lib2","SARS-CoV-2","CTACGCTTCTCATCGT",3,64.83,8.25,-2.58,0.13,2.28,1.08,0.01,">1 nonsynonymous","F8Y N157Y",2
"lib2","SARS-CoV-2","CTACGGAAAATAGCCT",6,51.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30M V52A C158L",3
"lib2","SARS-CoV-2","CTACGGAAGGCCCTAT",2,7.52,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","N13A S36H S113N Y165T",4
"lib2","SARS-CoV-2","CTACGGAGGAGTATCA",1,63.98,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N4T F12C T85M Y121T Y178D",5
"lib2","SARS-CoV-2","CTACGGATAATGATAT",4,55.37,9.76,-1.07,0.04,2.97,1.03,0,">1 nonsynonymous","N109L F156N",2
"lib2","SARS-CoV-2","CTACGGATAGCCTCAA",4,120.21,10.63,-0.2,0.04,2.91,1.06,0,">1 nonsynonymous","A33T D59S",2
"lib2","SARS-CoV-2","CTACGGATGGATATAT",5,20.46,7.47,-3.36,0.25,1.5,1.04,0.03,">1 nonsynonymous","C6I T15L S45L T148F A192V",5
"lib2","SARS-CoV-2","CTACGGGACACGCGCC",4,115.33,6.61,-4.23,0.16,1.67,1.09,0,">1 nonsynonymous","I2T G116T Y143D",3
"lib2","SARS-CoV-2","CTACGGGAGCTTCTTC",9,118.94,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S45L N92Y P149T",3
"lib2","SARS-CoV-2","CTACGGTAATCAGCAG",5,1.6,NA,NA,NA,NA,NA,NA,"stop","E10A S41H F62V Y91* N151L P161S",6
"lib2","SARS-CoV-2","CTACGGTACAAGAGCC",6,60.78,6,-4.84,2,3,1.12,0,">1 nonsynonymous","E10A R16I G101N G117D L162V",5
"lib2","SARS-CoV-2","CTACGGTCAAAAGTTA",4,19.39,10.54,-0.3,0.12,2.81,1.13,0,">1 nonsynonymous","I2V N40F",2
"lib2","SARS-CoV-2","CTACGTAAAATTAGCA",3,0.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L D59V T148N P169A",4
"lib2","SARS-CoV-2","CTACGTAATAAGACTG",9,73.92,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6W A89Q N107P T140F A190S",5
"lib2","SARS-CoV-2","CTACGTAATTCTATGC",3,9.98,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y50D T55G W106E G166Q",4
"lib2","SARS-CoV-2","CTACGTACATTAAATC",1,24.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K87M D137T T170H",3
"lib2","SARS-CoV-2","CTACGTACGCAATGTC",6,2.71,NA,NA,NA,NA,NA,NA,"stop","I2L G9* N120W R127S N151D",5
"lib2","SARS-CoV-2","CTACGTAGCATAACTC",1,5.03,9.14,-1.7,0.11,2.13,1,0,">1 nonsynonymous","V11A K87L W106F T201R",4
"lib2","SARS-CoV-2","CTACGTAGCTGTTTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G C150R T170L",3
"lib2","SARS-CoV-2","CTACGTAGGACAGCGC",4,17.25,6.02,-4.82,0.78,3,1.11,0.01,">1 nonsynonymous","K48C D59L F99Y G172M L183P",5
"lib2","SARS-CoV-2","CTACGTATGCCGTTAG",8,171.13,9.96,-0.88,0.08,2.19,1.07,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","CTACGTCACCCAGCGT",4,123.54,10.84,0,0.03,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGTCACCTTTAGA",5,22.26,7.35,-3.49,0.15,1.89,1.04,0.01,">1 nonsynonymous","C61W K87L P96D Y119L T201V",5
"lib2","SARS-CoV-2","CTACGTGAATAAGATA",4,87.67,10.8,-0.03,0.04,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACGTGAATAGATAG",10,88.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F L111Y Q144N V173R Q176V",5
"lib2","SARS-CoV-2","CTACGTGAGTTATTCC",2,40.08,10.74,-0.1,0.08,2.94,1.1,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","CTACGTGGGTAAGGCC",8,44.09,9.74,-1.1,0.1,2.03,1,0,">1 nonsynonymous","W23F E135W",2
"lib2","SARS-CoV-2","CTACGTTGAATTCGGG",9,132.19,10.14,-0.7,0.06,2.81,1.02,0,">1 nonsynonymous","K48Y T100F T148Y",3
"lib2","SARS-CoV-2","CTACGTTGCAACGTCG",6,44.97,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P96L S139I",2
"lib2","SARS-CoV-2","CTACGTTTAAATGACC",2,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CTACGTTTATCTAATA",6,71.09,8.19,-2.65,0.16,2.02,1.09,0.01,">1 nonsynonymous","G9M G117L S147Y G196L",4
"lib2","SARS-CoV-2","CTACTAAAGACTATTA",5,11.27,6.53,-4.3,0.24,3,1,0,">1 nonsynonymous","C6R G86C D98K E141R",4
"lib2","SARS-CoV-2","CTACTAAAGTAGGATA",11,108.15,6.92,-3.92,0.22,1.5,1.09,0.01,">1 nonsynonymous","G86M S139A",2
"lib2","SARS-CoV-2","CTACTAAATAGAGAGG",2,6.09,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","L5K G83W N107S N120M R136L T201V",6
"lib2","SARS-CoV-2","CTACTAAATCCCAGCA",1,88.07,8.38,-2.46,0.16,1.5,1.06,0.01,">1 nonsynonymous","S36C S45P N120F",3
"lib2","SARS-CoV-2","CTACTAACACTCCAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11W F70L",2
"lib2","SARS-CoV-2","CTACTAACAGCAGAAC",6,2.25,NA,NA,NA,NA,NA,NA,"stop","L60* K94A R127L G146E C150S",5
"lib2","SARS-CoV-2","CTACTAACATAGCGAG",2,59.2,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F17A C49W N120T R136W S184E",5
"lib2","SARS-CoV-2","CTACTAACATATAAAG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","C61* T201L",2
"lib2","SARS-CoV-2","CTACTAACGATATTAC",1,3.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","CTACTAAGAGGAGTTA",3,93.69,9.08,-1.75,0.05,2.89,1.09,0,">1 nonsynonymous","G9A T15D D98S Y119S",4
"lib2","SARS-CoV-2","CTACTAAGCGTTTATT",4,54.76,10.89,0.05,0.05,2.91,1.09,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","CTACTAAGCTTCAAAG",15,177.73,8.61,-2.22,0.09,2.07,1.07,0,">1 nonsynonymous","S45D D98Y N118I",3
"lib2","SARS-CoV-2","CTACTAATCAACCAGC",9,69.86,6,-4.84,0.9,1.6,1.14,0.01,">1 nonsynonymous","Y39M N92E V103S Y143V P197A",5
"lib2","SARS-CoV-2","CTACTAATCTCATACC",17,196.3,10.04,-0.79,0.05,2.61,1.07,0,">1 nonsynonymous","D97I R127A",2
"lib2","SARS-CoV-2","CTACTAATGCACCACA",3,27.32,10.21,-0.62,0.08,2.61,1,0,">1 nonsynonymous","S69Q T100M",2
"lib2","SARS-CoV-2","CTACTAATGGCTGTTC",1,4.07,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTACTAATGGTGAACA",8,120.13,9.77,-1.07,0.06,2.45,1.04,0,">1 nonsynonymous","R27I Y39M A89N Q168A L188H",5
"lib2","SARS-CoV-2","CTACTAATGTTTAATA",7,859.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64D D98K V103K R136W",4
"lib2","SARS-CoV-2","CTACTACAAGTCCTGT",10,4.77,NA,NA,NA,NA,NA,NA,"stop","S53* G83R D97S P197T",4
"lib2","SARS-CoV-2","CTACTACAGGCATTAA",5,21.89,9.2,-1.64,0.11,1.85,1.13,0,">1 nonsynonymous","L60T D97Q R136S",3
"lib2","SARS-CoV-2","CTACTACCATCAAGAG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","R16I Q163H F167* G174F",4
"lib2","SARS-CoV-2","CTACTACGACTAGCCG",2,27.56,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N40T C61S G83V N120Y R136K F160C G174S R179S",8
"lib2","SARS-CoV-2","CTACTACTGATACTTG",13,86.79,10.71,-0.13,0.04,2.98,1.05,0,">1 nonsynonymous","Y39F I88V",2
"lib2","SARS-CoV-2","CTACTACTTAGATCAA",11,123.75,9.93,-0.9,0.06,2.71,1.05,0,">1 nonsynonymous","N64W K114M E141W",3
"lib2","SARS-CoV-2","CTACTAGACCATGGTA",2,44.82,6,-4.84,0.92,3,1.15,0.01,">1 nonsynonymous","F17C N118L Y165L",3
"lib2","SARS-CoV-2","CTACTAGCAAGTTGTA",1,10.27,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","P96F",1
"lib2","SARS-CoV-2","CTACTAGCAGGGTAAC",1,24.93,10.87,0.04,0.07,2.85,1.18,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","CTACTAGCGTTATTTT",12,1.52,NA,NA,NA,NA,NA,NA,"stop","D97N K128* T201A",3
"lib2","SARS-CoV-2","CTACTAGCTCGCTGTG",1,1.82,NA,NA,NA,NA,NA,NA,"stop","F160T G166* Y175G T201G",4
"lib2","SARS-CoV-2","CTACTAGCTTCACAGT",1,13.97,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","I28S S53T A81D D112S G146W F156V",6
"lib2","SARS-CoV-2","CTACTAGCTTGCACTT",5,47.52,8.69,-2.14,0.2,1.5,1.04,0.01,">1 nonsynonymous","L122H Y165T",2
"lib2","SARS-CoV-2","CTACTAGTCGAGCAGA",33,532.05,10.31,-0.53,0.03,2.96,1.06,0,">1 nonsynonymous","V37Y G174L",2
"lib2","SARS-CoV-2","CTACTAGTGTTGATCT",2,42.02,9.08,-1.75,0.09,2.74,1.18,0,">1 nonsynonymous","R16I R73A N151T",3
"lib2","SARS-CoV-2","CTACTATAACCCTTCT",3,129.8,6.02,-4.82,0.61,1.5,1.16,0.01,">1 nonsynonymous","N107F E154R Q176S",3
"lib2","SARS-CoV-2","CTACTATAACGATAAA",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P Y143L N151V",3
"lib2","SARS-CoV-2","CTACTATATAAACAAA",12,20.72,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","E10D K87S I104P P149L",4
"lib2","SARS-CoV-2","CTACTATATAATAAAG",1,11.13,10.28,-0.55,0.25,2.46,1.03,0.03,"1 nonsynonymous","N151C",1
"lib2","SARS-CoV-2","CTACTATCAAACTGTC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","L5C F99S N109Q P149*",4
"lib2","SARS-CoV-2","CTACTATCGTATTAAG",2,0.13,NA,NA,NA,NA,NA,NA,"stop","T55S K87* I142R S147F",4
"lib2","SARS-CoV-2","CTACTATCTCAATACA",2,27.64,11.03,0.19,0.08,2.96,1.04,0,">1 nonsynonymous","E154R S200L",2
"lib2","SARS-CoV-2","CTACTATTCGCATTAG",10,78.85,9.52,-1.31,0.07,1.87,1.08,0,">1 nonsynonymous","L5W P82T",2
"lib2","SARS-CoV-2","CTACTATTGAGTAGCA",8,90.1,10.18,-0.66,0.05,2.94,1.06,0,">1 nonsynonymous","T63I V115T G174S",3
"lib2","SARS-CoV-2","CTACTATTTTATTTAC",4,86.37,10.81,-0.02,0.03,2.98,1.05,0,">1 nonsynonymous","T3D S36A",2
"lib2","SARS-CoV-2","CTACTCAACCGAGACG",13,20.8,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I88P F156W Q176G",3
"lib2","SARS-CoV-2","CTACTCACCCCCACAC",5,38.55,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y50D Y91T",2
"lib2","SARS-CoV-2","CTACTCACTACTATTA",3,18.93,7.98,-2.86,0.26,1.51,1.24,0.02,">1 nonsynonymous","N107R N120T F160W",3
"lib2","SARS-CoV-2","CTACTCAGGTCATAGA",2,44.18,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C49L K94T T170P P197M",4
"lib2","SARS-CoV-2","CTACTCATCACCAATG",17,106.93,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S41W N64L F70K A81N N157F",5
"lib2","SARS-CoV-2","CTACTCCCAAATGGTC",5,54.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F17N N92M L122W F134N A145G L162P",6
"lib2","SARS-CoV-2","CTACTCCCAATCCCTT",3,23.5,8.8,-2.04,0.14,1.77,1.13,0.01,">1 nonsynonymous","V11A D97Y K114N",3
"lib2","SARS-CoV-2","CTACTCCTACATTACG",2,15.37,10.88,0.04,0.08,2.93,1.05,0,">1 nonsynonymous","N4P T55A",2
"lib2","SARS-CoV-2","CTACTCCTCTTAACAT",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W Y119L F167S",3
"lib2","SARS-CoV-2","CTACTCGAACCCTGGA",8,62.62,6.2,-4.63,0.35,1.5,1.11,0,">1 nonsynonymous","S19W Y91N",2
"lib2","SARS-CoV-2","CTACTCGATTAGAATA",5,75.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A18I N30V F156L L187H",4
"lib2","SARS-CoV-2","CTACTCGCCCTCATTA",4,2.98,NA,NA,NA,NA,NA,NA,"stop","C6D A22R L57F Y175*",4
"lib2","SARS-CoV-2","CTACTCGCGAATAACA",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P R25E",2
"lib2","SARS-CoV-2","CTACTCGGATGGCATG",4,15.03,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F62Y D90Y P96W F167S T201M",5
"lib2","SARS-CoV-2","CTACTCTGAAGTTGAC",6,151.66,10.64,-0.19,0.03,2.96,1,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","CTACTCTGGAGCTTAA",7,0.37,NA,NA,NA,NA,NA,NA,"stop","V77* G86D N130F",3
"lib2","SARS-CoV-2","CTACTCTTATCTATAC",1,20,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N92M N157C",2
"lib2","SARS-CoV-2","CTACTGAAAAATAATG",6,37.87,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F99D P149S",2
"lib2","SARS-CoV-2","CTACTGAAACGGTCGG",2,36.23,7.1,-3.73,0.34,1.5,1.17,0.03,">1 nonsynonymous","G146S V153F L162Y V194L",4
"lib2","SARS-CoV-2","CTACTGAATATATCAA",2,61.01,10.3,-0.53,0.03,2.92,1.01,0,">1 nonsynonymous","T15M G174A",2
"lib2","SARS-CoV-2","CTACTGAATTTTGTGC",4,17.7,6,-4.84,2,3,1.28,0.01,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","CTACTGACCAGTAAAA",24,10.12,NA,NA,NA,NA,NA,NA,"stop","N4L A18V V77* K128Q G174A",5
"lib2","SARS-CoV-2","CTACTGAGGCCCATTC",7,139.25,10.58,-0.26,0.05,2.9,1.11,0,"1 nonsynonymous","Q144H",1
"lib2","SARS-CoV-2","CTACTGGAGGGCCTAA",2,60.28,10.7,-0.14,0.05,2.94,1.07,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","CTACTGTTACTCACGT",3,8.2,8.44,-2.4,0.11,1.86,1,0,">1 nonsynonymous","G9M N107M",2
"lib2","SARS-CoV-2","CTACTTAAAACACGGG",13,24.55,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13Q L60V R124N T170I T201S",5
"lib2","SARS-CoV-2","CTACTTAATTCGAACG",2,64.01,10.82,-0.01,0.07,2.94,1.07,0,">1 nonsynonymous","L122V T201M",2
"lib2","SARS-CoV-2","CTACTTACGTGAACGT",4,0.37,NA,NA,NA,NA,NA,NA,"stop","I28L N64K Y93* L188T",4
"lib2","SARS-CoV-2","CTACTTACTAATCTAT",5,158.26,10.78,-0.05,0.05,2.9,1.12,0,">1 nonsynonymous","V115Y L122A",2
"lib2","SARS-CoV-2","CTACTTACTTCAATTA",8,76.15,10.74,-0.1,0.03,2.97,1.03,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","CTACTTAGCATAAACT",10,202.29,10.59,-0.25,0.04,2.92,1.06,0,">1 nonsynonymous","Y39M D59V",2
"lib2","SARS-CoV-2","CTACTTATCTGGCATT",2,0.95,NA,NA,NA,NA,NA,NA,"stop","E10* N120P",2
"lib2","SARS-CoV-2","CTACTTATTTCACCTT",6,15.66,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","F44L L57G C102K G174N",4
"lib2","SARS-CoV-2","CTACTTCACCTCCCAG",2,39.38,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N118C R179M",2
"lib2","SARS-CoV-2","CTACTTCAGATGTCCA",8,63.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P7T G51R S69V V180R",4
"lib2","SARS-CoV-2","CTACTTCATGTTCTAC",15,99.24,10.86,0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACTTCCCACGATCT",1,27.28,10.74,-0.1,0.05,2.84,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CTACTTCCCGAACATC",1,0,NA,NA,NA,NA,NA,NA,"stop","L38* Q84L",2
"lib2","SARS-CoV-2","CTACTTCCGGGAACCT",2,20.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7L D112E P161S",3
"lib2","SARS-CoV-2","CTACTTCTACACACAT",23,325.72,10.3,-0.54,0.04,2.79,1.04,0,">1 nonsynonymous","N4Q S139L H189T",3
"lib2","SARS-CoV-2","CTACTTGACGTGTTAC",5,31.98,9.6,-1.24,0.13,2.41,1.01,0.01,">1 nonsynonymous","C6R V52L L188M",3
"lib2","SARS-CoV-2","CTACTTGAGTAGTCTC",2,75.88,10.87,0.04,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTACTTGATCTGGAAT",5,49.62,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","K26G G86C",2
"lib2","SARS-CoV-2","CTACTTGGTCTATGGC",3,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58S G86N S129I F167L",4
"lib2","SARS-CoV-2","CTACTTGTCCATACAA",1,24.58,10.9,0.06,0.08,2.93,1.04,0,"1 nonsynonymous","T15P",1
"lib2","SARS-CoV-2","CTACTTGTCCGTCACT",4,18.13,7.21,-3.63,0.37,1.5,1.11,0.04,">1 nonsynonymous","N1E Y50R D59S P96S Y165I",5
"lib2","SARS-CoV-2","CTACTTTAAAGTGACT",7,36.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L R179W",2
"lib2","SARS-CoV-2","CTACTTTCATACCTAC",9,72.91,10.82,-0.02,0.04,2.98,1.04,0,">1 nonsynonymous","I104V T201S",2
"lib2","SARS-CoV-2","CTACTTTCATGACTTG",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G D98M Y143P",3
"lib2","SARS-CoV-2","CTACTTTCCCTCAACC",1,20.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9F L95G F99L Y119C E141W F167G",6
"lib2","SARS-CoV-2","CTACTTTCGACGGATG",9,66.23,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A18V Y50K",2
"lib2","SARS-CoV-2","CTACTTTTAGAAAAGG",4,23.06,9.42,-1.42,0.13,1.97,1,0.01,">1 nonsynonymous","D34S V52L N107S",3
"lib2","SARS-CoV-2","CTAGAAAAAAACGCTA",2,1.03,NA,NA,NA,NA,NA,NA,"stop","R16* D90L K94N S129A",4
"lib2","SARS-CoV-2","CTAGAAAAAACATTCG",12,105.37,6,-4.84,1.51,1.5,1.21,0.01,">1 nonsynonymous","E10D C49D T201D",3
"lib2","SARS-CoV-2","CTAGAAAAAGTCAGAA",7,0.12,NA,NA,NA,NA,NA,NA,"stop","A18K S41Y I104* T140V P169S V180F S200H",7
"lib2","SARS-CoV-2","CTAGAAAAATCATGTT",6,73.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44S P82R T85M L187M G196A",5
"lib2","SARS-CoV-2","CTAGAAAACGATAGTA",3,21.34,9.15,-1.69,0.1,1.96,1.05,0,">1 nonsynonymous","A14L E135W",2
"lib2","SARS-CoV-2","CTAGAAAACGCACGAG",4,153.85,10.28,-0.56,0.04,2.92,1.06,0,">1 nonsynonymous","I2N A42I K56L E154P",4
"lib2","SARS-CoV-2","CTAGAAAACTGCCGGT",1,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S K87R Y93E",3
"lib2","SARS-CoV-2","CTAGAAAACTTTTCTC",4,0.57,NA,NA,NA,NA,NA,NA,"stop","W23P G86K D98*",3
"lib2","SARS-CoV-2","CTAGAAAAGATAGTTC",7,50.86,6.8,-4.03,0.37,1.5,1.25,0.02,">1 nonsynonymous","V11D C61Y Q84A K94C",4
"lib2","SARS-CoV-2","CTAGAAAATGAAACAA",1,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y C61V A81H D97A H189D",5
"lib2","SARS-CoV-2","CTAGAAAATGTACTCG",3,62.05,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","V37M Y121T S139V",3
"lib2","SARS-CoV-2","CTAGAAAATGTTTTTA",3,2.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23T",1
"lib2","SARS-CoV-2","CTAGAAACATGCGCCT",3,6.34,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P7N S53L P82W S139M C158S",5
"lib2","SARS-CoV-2","CTAGAAACATTCTACA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* P54S V77Y F160L",4
"lib2","SARS-CoV-2","CTAGAAACATTGGGAC",7,103.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5D K26T Y93T D98P",4
"lib2","SARS-CoV-2","CTAGAAACGATGTGTC",1,14.88,10.48,-0.35,0.07,2.88,1.14,0,"1 nonsynonymous","F44H",1
"lib2","SARS-CoV-2","CTAGAAACGTACGGAA",2,35.62,6.15,-4.69,0.74,1.5,1.12,0.03,">1 nonsynonymous","C6W R25D I88R",3
"lib2","SARS-CoV-2","CTAGAAACGTGAATAC",3,15.22,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","S36A I88H Y119F",3
"lib2","SARS-CoV-2","CTAGAAACTAAGGGCA",1,6.66,10.69,-0.15,0.09,2.99,1.01,0.01,"1 nonsynonymous","N58A",1
"lib2","SARS-CoV-2","CTAGAAACTAATAAGC",5,14.32,10.99,0.15,0.07,2.81,1.17,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","CTAGAAACTCATCTCA",3,54.98,10.12,-0.71,0.08,2.57,1.01,0,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","CTAGAAACTTAGCCCA",1,10.47,10.13,-0.7,0.13,2.32,1.1,0.01,">1 nonsynonymous","V32S K56I N120C",3
"lib2","SARS-CoV-2","CTAGAAAGCGCTTATA",11,7.05,NA,NA,NA,NA,NA,NA,"stop","L5S V37* P133Q G174*",4
"lib2","SARS-CoV-2","CTAGAAAGCTTGAAAG",4,0.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172T",1
"lib2","SARS-CoV-2","CTAGAAAGGCCTGCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12C I104F I142*",3
"lib2","SARS-CoV-2","CTAGAAATAACGAAAA",8,200.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14T K48G G116L Y121A E135N F160E P169E",7
"lib2","SARS-CoV-2","CTAGAAATAGCTTAAT",5,31.97,10.82,-0.01,0.04,2.94,1.09,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","CTAGAAATGTCACTCC",6,32.57,10.88,0.05,0.06,2.97,1.06,0,">1 nonsynonymous","N130K T140D P191E",3
"lib2","SARS-CoV-2","CTAGAACAATTGAAAA",3,0.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83C",1
"lib2","SARS-CoV-2","CTAGAACAGTTAAGTA",5,204.41,10.62,-0.22,0.03,2.94,1.05,0,">1 nonsynonymous","S41K T201N",2
"lib2","SARS-CoV-2","CTAGAACATAATAGTA",8,49.59,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A33L S36C D68W T85Y Y121W",5
"lib2","SARS-CoV-2","CTAGAACATACATCTA",4,53.45,9.73,-1.1,0.09,2.71,1.02,0,">1 nonsynonymous","C6N Q144K",2
"lib2","SARS-CoV-2","CTAGAACATAGAAATT",4,48.08,10.39,-0.44,0.05,2.78,1.14,0,">1 nonsynonymous","S45Y A105F",2
"lib2","SARS-CoV-2","CTAGAACCAAACTCGT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTAGAACCAACTATCT",4,9.27,10.14,-0.7,0.19,2.36,1,0.01,"1 nonsynonymous","D34M",1
"lib2","SARS-CoV-2","CTAGAACCCCTCAGCA",1,13.03,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V37K C49L K94R A105L P149H",5
"lib2","SARS-CoV-2","CTAGAACCGTAATCTG",2,37.5,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K48A G86V",2
"lib2","SARS-CoV-2","CTAGAACCTCAACAAA",1,9.65,6.88,-3.96,1.65,1.5,1.14,0.03,">1 nonsynonymous","N1K E10R L60R I88H K94P R127G G155Q N171G",8
"lib2","SARS-CoV-2","CTAGAACTTCAGAATG",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C K48C A105D K114T L162E",5
"lib2","SARS-CoV-2","CTAGAACTTTCCGTAT",2,2.26,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTAGAAGACTACAACG",17,118.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S69R W106L C158L",3
"lib2","SARS-CoV-2","CTAGAAGACTCCTCCG",2,35.09,10.4,-0.43,0.1,2.73,1.04,0,"1 nonsynonymous","R127A",1
"lib2","SARS-CoV-2","CTAGAAGCCAACATCT",3,64.85,6.17,-4.67,0.79,1.5,1.16,0.02,">1 nonsynonymous","V115R P161H K199N",3
"lib2","SARS-CoV-2","CTAGAAGGAACACATT",3,103.88,8.96,-1.88,0.06,2.32,1.09,0,">1 nonsynonymous","S36K K56R F62C D98F F156M",5
"lib2","SARS-CoV-2","CTAGAAGTTACCCGTC",2,47.47,9.99,-0.84,0.04,2.69,1.08,0,">1 nonsynonymous","V11T N120M",2
"lib2","SARS-CoV-2","CTAGAATAAACGCATA",5,98.15,8.91,-1.92,0.09,2.34,1.06,0,">1 nonsynonymous","R16Q S41G T55S N107D",4
"lib2","SARS-CoV-2","CTAGAATAACTTAAAC",3,19.35,10.83,0,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGAATACGCGAATA",10,94.12,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S45R P82A P149T E154T",4
"lib2","SARS-CoV-2","CTAGAATATACCTGCA",3,30.36,10.86,0.03,0.06,2.78,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGAATCAAGAGTAT",5,1.01,NA,NA,NA,NA,NA,NA,"stop","A18*",1
"lib2","SARS-CoV-2","CTAGAATCAGCTATGT",7,116.68,10.04,-0.8,0.05,2.89,1.03,0,">1 nonsynonymous","I142Y P149Y",2
"lib2","SARS-CoV-2","CTAGAATCCAAACTTA",2,20.35,8.58,-2.26,0.41,1.5,1,0.08,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","CTAGAATCTAATATAA",6,110.61,10.28,-0.55,0.04,2.83,1.05,0,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","CTAGAATCTCAGATAC",5,120.8,10.92,0.08,0.05,2.99,1.03,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","CTAGAATGAAGGAGTC",1,12.68,8.79,-2.05,0.42,1.5,1.03,0.05,">1 nonsynonymous","L5K N64P A81T S129L E154L",5
"lib2","SARS-CoV-2","CTAGAATGAGGCTAAC",16,236.94,10.57,-0.27,0.02,2.95,1.06,0,">1 nonsynonymous","R27W S200C",2
"lib2","SARS-CoV-2","CTAGAATTACTTCGTC",6,14.89,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5F E10D C49F P133N N157E",5
"lib2","SARS-CoV-2","CTAGAATTGAGACTAA",9,102.27,6,-4.84,1.27,1.5,1.15,0.01,">1 nonsynonymous","N40V S45I N58K T100M E135R G196E",6
"lib2","SARS-CoV-2","CTAGACAAAAATTGGG",2,6.97,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D34I C150M P197H",3
"lib2","SARS-CoV-2","CTAGACAAAGGGCAAA",5,24.08,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","R124C",1
"lib2","SARS-CoV-2","CTAGACAACTCTGGCT",3,49.5,10.59,-0.24,0.04,2.98,1.04,0,">1 nonsynonymous","Y39S P149S P191T",3
"lib2","SARS-CoV-2","CTAGACAAGCCCCCGG",11,72.01,6,-4.84,1.1,1.5,1.09,0.01,">1 nonsynonymous","S43P G117W F167P",3
"lib2","SARS-CoV-2","CTAGACAAGGGATAAA",2,54.16,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","I2A G86I K128R",3
"lib2","SARS-CoV-2","CTAGACAATGACCTAG",4,0.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73I",1
"lib2","SARS-CoV-2","CTAGACACCTATTTGA",2,47.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S41L G172Y",2
"lib2","SARS-CoV-2","CTAGACAGAAACGCAA",7,3.09,NA,NA,NA,NA,NA,NA,"stop","A14* A22L T55G L122*",4
"lib2","SARS-CoV-2","CTAGACATACAAATCA",5,15.07,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","W106H L131S G196W",3
"lib2","SARS-CoV-2","CTAGACATGGGCCCGA",2,38.44,10.85,0.01,0.07,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAGACATGTCCTAAA",7,3.44,NA,NA,NA,NA,NA,NA,"stop","S69* S147C Y178S",3
"lib2","SARS-CoV-2","CTAGACCAACGGATTC",14,0,NA,NA,NA,NA,NA,NA,"stop","C6L S41* Y91V W106R D112* I142R",6
"lib2","SARS-CoV-2","CTAGACCAATAAAAAA",3,3.05,NA,NA,NA,NA,NA,NA,"stop","K94N G117C G155M L162*",4
"lib2","SARS-CoV-2","CTAGACCAATAATCAA",10,133.88,6.07,-4.76,1.08,1.5,1.22,0.02,">1 nonsynonymous","A81V A105N",2
"lib2","SARS-CoV-2","CTAGACCACCCTACAA",15,8.55,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","L5V G86F Y93C S129M",4
"lib2","SARS-CoV-2","CTAGACCAGGACACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","K132* F134L",2
"lib2","SARS-CoV-2","CTAGACCCCAATCAAA",8,29.78,9.5,-1.34,0.09,2.11,1.1,0,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","CTAGACCCCCGCATCA",2,29.3,10.97,0.14,0.06,3,1.02,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","CTAGACCGAGCTTATT",6,120.99,10.3,-0.54,0.03,2.91,1.07,0,">1 nonsynonymous","Y35S Q163S",2
"lib2","SARS-CoV-2","CTAGACCTTGTACCCA",5,37.37,6.12,-4.72,0.67,1.5,1.11,0.01,">1 nonsynonymous","G9R C49R A81C P82T",4
"lib2","SARS-CoV-2","CTAGACGAGGCTTAAG",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14C A81V",2
"lib2","SARS-CoV-2","CTAGACGGGGTAGCGC",2,58.7,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","T148H N157P F167L",3
"lib2","SARS-CoV-2","CTAGACTACTCAGACA",9,0.63,NA,NA,NA,NA,NA,NA,"stop","T63Q K87*",2
"lib2","SARS-CoV-2","CTAGACTCAGCTCCAA",14,99.09,9.69,-1.15,0.04,2.99,1.04,0,">1 nonsynonymous","N1E L60Y F126W G146S",4
"lib2","SARS-CoV-2","CTAGACTTAAGTTTTA",3,45.17,10.77,-0.06,0.03,2.96,1.05,0,">1 nonsynonymous","P54T S139G",2
"lib2","SARS-CoV-2","CTAGACTTACGAACCA",4,50.95,10.51,-0.33,0.04,2.9,1.04,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","CTAGAGAAGATACCCT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","I28* D98V A105M P149I Q168W Y178K",6
"lib2","SARS-CoV-2","CTAGAGACCTATACGT",2,18.79,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","N64T C102L R136T",3
"lib2","SARS-CoV-2","CTAGAGAGCAGGCGTA",6,71.28,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V77K L122A R127P",3
"lib2","SARS-CoV-2","CTAGAGATGAAAAGCA",3,15.82,8.11,-2.72,0.18,1.94,1,0.01,">1 nonsynonymous","A33V S43R C150S",3
"lib2","SARS-CoV-2","CTAGAGATTCCGCAAT",7,0.3,NA,NA,NA,NA,NA,NA,"stop","T15* D97L P149S",3
"lib2","SARS-CoV-2","CTAGAGCCTAACAATG",5,87.89,8.15,-2.69,0.13,2.22,1.05,0.01,">1 nonsynonymous","P54N L60Q Y175C",3
"lib2","SARS-CoV-2","CTAGAGCCTAGTTCGT",1,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I G86D Y178F K199D",4
"lib2","SARS-CoV-2","CTAGAGCTTCCACTAA",8,954.68,10.59,-0.24,0.03,2.9,1.08,0,"1 nonsynonymous","N130E",1
"lib2","SARS-CoV-2","CTAGAGGAGAGCAGCT",4,22.46,10.28,-0.55,0.09,2.72,1,0,">1 nonsynonymous","N1E K26A K48L D90N",4
"lib2","SARS-CoV-2","CTAGAGGGAACCGCTA",1,47.57,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23T F47I G116L P177K",4
"lib2","SARS-CoV-2","CTAGAGGGCTAATAGT",1,17.8,10.54,-0.3,0.09,2.99,1,0,">1 nonsynonymous","E141K G152H",2
"lib2","SARS-CoV-2","CTAGAGTGAAATACCA",1,40.55,9.57,-1.27,0.05,2.84,1.15,0,">1 nonsynonymous","S45R F156S",2
"lib2","SARS-CoV-2","CTAGATAAGCATATTA",8,72.3,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N24F P82G A105T",3
"lib2","SARS-CoV-2","CTAGATACGGGTTTCT",1,14.31,6.8,-4.04,0.24,1.82,1.04,0.01,">1 nonsynonymous","A14T S147F T170I",3
"lib2","SARS-CoV-2","CTAGATAGTGTGGGCT",9,98.67,6,-4.84,1.26,1.65,1.09,0,">1 nonsynonymous","T46G G86Q D98S G155D Y175S",5
"lib2","SARS-CoV-2","CTAGATCCTCCACGAC",5,55.13,10.89,0.05,0.05,3,1.03,0,"1 nonsynonymous","S53D",1
"lib2","SARS-CoV-2","CTAGATCGCTTAAAAC",9,166.94,10.78,-0.05,0.04,2.95,1.07,0,">1 nonsynonymous","T3M N151K",2
"lib2","SARS-CoV-2","CTAGATCTGAACGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","I2T C150* N151G P161I",4
"lib2","SARS-CoV-2","CTAGATGAATTCCTCG",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W T85G",2
"lib2","SARS-CoV-2","CTAGATGCACGGTAGG",7,3.49,NA,NA,NA,NA,NA,NA,"stop","A81F D112K K128* Q163*",4
"lib2","SARS-CoV-2","CTAGATGGGATGACCA",4,0.54,NA,NA,NA,NA,NA,NA,"stop","A42* T85E I138A",3
"lib2","SARS-CoV-2","CTAGATGTGCTAAAAA",11,33.31,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","D68A T148C",2
"lib2","SARS-CoV-2","CTAGATTACCAGCCCG",6,215.48,10.44,-0.39,0.04,2.87,1.05,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","CTAGATTCGAAACAAG",18,170.85,10.81,-0.02,0.04,2.94,1.07,0,"1 nonsynonymous","S129N",1
"lib2","SARS-CoV-2","CTAGATTGCTAATTCC",18,280.76,10.82,-0.01,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAGATTGTCAGTAAA",9,3.75,NA,NA,NA,NA,NA,NA,"stop","K56R D90H P96* V103* G116L N130F",6
"lib2","SARS-CoV-2","CTAGATTTCCTTTTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","W23* G51L E141W",3
"lib2","SARS-CoV-2","CTAGATTTCTGATACA",4,14.48,9.46,-1.37,0.21,1.83,1.25,0.01,">1 nonsynonymous","D90I G116K",2
"lib2","SARS-CoV-2","CTAGATTTGTTGATAT",3,35.45,10.73,-0.11,0.05,3,1.01,0,">1 nonsynonymous","F12L Y35L T55F",3
"lib2","SARS-CoV-2","CTAGCAAAGATGCAGT",6,73.75,9.63,-1.2,0.05,2.1,1.01,0,">1 nonsynonymous","A89N L187C",2
"lib2","SARS-CoV-2","CTAGCAAAGATTCAAA",3,31.92,10.13,-0.71,0.06,2.43,1.06,0,">1 nonsynonymous","A14R K94N",2
"lib2","SARS-CoV-2","CTAGCAACAATATTCT",1,18.84,10.79,-0.05,0.05,2.96,1,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","CTAGCAACACCCGTTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4A",1
"lib2","SARS-CoV-2","CTAGCAACCCCATCAA",9,50.61,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","CTAGCAACTAGTTGCG",8,43.33,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9S S41D P96N F99I W106N",5
"lib2","SARS-CoV-2","CTAGCAAGAACTGCCG",6,30.96,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","F99H A105Y",2
"lib2","SARS-CoV-2","CTAGCAAGTAATCTAA",4,15.45,8.67,-2.17,0.22,1.79,1.12,0.02,">1 nonsynonymous","T3A L5M N13T V37L Y119K G152R S200V",7
"lib2","SARS-CoV-2","CTAGCAATATATGACT",19,166.61,10.85,0.02,0.04,2.93,1.09,0,">1 nonsynonymous","V37W E141K",2
"lib2","SARS-CoV-2","CTAGCAATTCAAATTT",11,1.24,NA,NA,NA,NA,NA,NA,"stop","D98F W106* I142K Q163S",4
"lib2","SARS-CoV-2","CTAGCAATTCAGATAG",3,795.86,10.77,-0.06,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGCACAAAGTGTAA",2,31.77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2G C6K F12R A42C N171H",5
"lib2","SARS-CoV-2","CTAGCACAACAATTGG",9,155.4,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V32T P82W G152C C158M",4
"lib2","SARS-CoV-2","CTAGCACAAGGTATCT",4,81.36,9.58,-1.25,0.07,1.7,1.09,0,">1 nonsynonymous","T46L F134K S164M",3
"lib2","SARS-CoV-2","CTAGCACACTGAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N58M A89V W106L Y165*",4
"lib2","SARS-CoV-2","CTAGCACATATATCAT",1,13.5,9.85,-0.99,0.13,1.96,1,0.01,">1 nonsynonymous","R16L A42L S139F",3
"lib2","SARS-CoV-2","CTAGCACCGGTACCGA",2,22.55,9.66,-1.17,0.12,2.21,1.17,0.01,">1 nonsynonymous","S41T N58R F99M",3
"lib2","SARS-CoV-2","CTAGCACGGCGCACTT",8,52.75,10.88,0.04,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGCACTAAGGAAAC",1,7.44,6.28,-4.56,0.4,3,1.02,0.01,">1 nonsynonymous","R16I Y21G T55G L111N",4
"lib2","SARS-CoV-2","CTAGCACTATACAGCT",13,117.04,9.87,-0.97,0.09,2.47,1.09,0,">1 nonsynonymous","L60P G83S",2
"lib2","SARS-CoV-2","CTAGCACTTGGCCAGA",3,102.7,8.53,-2.3,0.07,2.21,1.05,0,">1 nonsynonymous","N120T P149N H189F P191T",4
"lib2","SARS-CoV-2","CTAGCAGACATACTGT",3,46.63,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35V A42R D137R G172S",4
"lib2","SARS-CoV-2","CTAGCAGACATTATCG",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63D F99S",2
"lib2","SARS-CoV-2","CTAGCAGAGAGGATGT",2,12.01,6.16,-4.68,0.51,2.08,1.16,0.01,">1 nonsynonymous","F99N G146L",2
"lib2","SARS-CoV-2","CTAGCAGATTTCCCAA",1,14.93,10.6,-0.23,0.12,2.71,1.21,0,">1 nonsynonymous","K132C T148S",2
"lib2","SARS-CoV-2","CTAGCAGCTACAAACC",2,7.29,10.9,0.06,0.08,3,1.02,0,"1 nonsynonymous","L125M",1
"lib2","SARS-CoV-2","CTAGCAGGTGAGATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F47* K56Q V103G",3
"lib2","SARS-CoV-2","CTAGCAGTGTGTTAGG",2,7.61,6.37,-4.47,0.9,1.5,1.38,0.05,">1 nonsynonymous","V32N S41L P96D",3
"lib2","SARS-CoV-2","CTAGCATAAGTACATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F T100A G152I A190H",4
"lib2","SARS-CoV-2","CTAGCATAATTCTACT",4,85.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y66S F99N Q163W T201S",4
"lib2","SARS-CoV-2","CTAGCATCTCTACAAA",3,38.08,9.64,-1.19,0.1,1.99,1.05,0,"1 nonsynonymous","S69I",1
"lib2","SARS-CoV-2","CTAGCATGTTCAGCGC",1,60.94,8.12,-2.71,0.22,1.5,1.04,0.02,">1 nonsynonymous","V11T D137V",2
"lib2","SARS-CoV-2","CTAGCATTGTACGTGA",2,34.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3I F12Q K87G",3
"lib2","SARS-CoV-2","CTAGCATTTACCTTGT",2,0.1,NA,NA,NA,NA,NA,NA,"stop","T3F A33* D97G T100F K114W",5
"lib2","SARS-CoV-2","CTAGCCAGAGACATAT",4,16.18,6.16,-4.68,0.99,1.5,1.18,0.03,">1 nonsynonymous","I2L Y50S P177T A190F",4
"lib2","SARS-CoV-2","CTAGCCATACGATTCT",2,50.72,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36G S41T V77E R78L N92E",5
"lib2","SARS-CoV-2","CTAGCCATAGACGGCT",1,7.62,7.21,-3.62,0.48,1.5,1,0.04,"1 nonsynonymous","I88W",1
"lib2","SARS-CoV-2","CTAGCCATGTAAAGAA",1,1.22,NA,NA,NA,NA,NA,NA,"stop","F8C N92* S164I",3
"lib2","SARS-CoV-2","CTAGCCCCTATCCGCG",3,0,NA,NA,NA,NA,NA,NA,"stop","N1T F62T S147*",3
"lib2","SARS-CoV-2","CTAGCCGGAAATCTAA",11,243.1,8.17,-2.67,0.11,2.59,1.06,0,"1 nonsynonymous","Y143R",1
"lib2","SARS-CoV-2","CTAGCCGTGATACTGA",11,157.13,9.62,-1.21,0.1,1.61,1.1,0,">1 nonsynonymous","V11N D34K A42N N110S Y123W",5
"lib2","SARS-CoV-2","CTAGCCTCATATCGCT",3,56.54,10.64,-0.2,0.06,2.98,1.03,0,">1 nonsynonymous","N1L N58E",2
"lib2","SARS-CoV-2","CTAGCCTTGGCGTACC",3,10.76,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S19I C61F",2
"lib2","SARS-CoV-2","CTAGCGAAAATTCATG",8,15.1,9.57,-1.26,0.11,1.92,1.01,0.01,">1 nonsynonymous","N13Y A81M",2
"lib2","SARS-CoV-2","CTAGCGATCCCCAAAG",13,143.03,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25C R136L",2
"lib2","SARS-CoV-2","CTAGCGCTCCCTGCAT",1,32.97,9.72,-1.12,0.09,2.17,1.08,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","CTAGCGGAAAATTCAT",4,87.3,10.16,-0.68,0.04,2.87,1.08,0,">1 nonsynonymous","L60P T100L V173I",3
"lib2","SARS-CoV-2","CTAGCGGGTGCAACCT",1,54.38,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","G9I R16V S41K Y50N C102L P177L S200F",7
"lib2","SARS-CoV-2","CTAGCGTAGCTCAGGC",4,38.63,6.94,-3.9,0.49,1.5,1.23,0.04,">1 nonsynonymous","S36L F44L V77R",3
"lib2","SARS-CoV-2","CTAGCGTCCAATGCAA",6,46.71,9.1,-1.74,0.09,1.86,1.1,0,">1 nonsynonymous","F8S P169T",2
"lib2","SARS-CoV-2","CTAGCGTCTGACAATA",3,11.29,10.57,-0.26,0.15,2.62,1.3,0,"1 nonsynonymous","I138E",1
"lib2","SARS-CoV-2","CTAGCGTTTAGAAAAT",7,37.97,8.92,-1.91,0.21,1.51,1.11,0.02,">1 nonsynonymous","N1L V11R",2
"lib2","SARS-CoV-2","CTAGCGTTTTCAAATG",4,12.41,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","F12R F62R T100D",3
"lib2","SARS-CoV-2","CTAGCTAAACCTATCC",9,81.44,10.64,-0.19,0.06,2.85,1.08,0,">1 nonsynonymous","L131V P149T",2
"lib2","SARS-CoV-2","CTAGCTAACACATATT",2,33.9,9.89,-0.95,0.1,2.34,1.02,0.01,">1 nonsynonymous","D90E S139L",2
"lib2","SARS-CoV-2","CTAGCTAACAGAATAG",2,0.56,NA,NA,NA,NA,NA,NA,"stop","V71* I80A N130P V173G",4
"lib2","SARS-CoV-2","CTAGCTAATGAGGACA",2,34.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y21V T140L P161H",3
"lib2","SARS-CoV-2","CTAGCTACAACACAAC",3,23.27,7.88,-2.95,0.26,1.66,1.22,0.02,">1 nonsynonymous","D90Y D137E",2
"lib2","SARS-CoV-2","CTAGCTACTTCCTCTA",11,74.8,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R25W V77K S139D",3
"lib2","SARS-CoV-2","CTAGCTATAATCGTTA",4,80.92,10.81,-0.02,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGCTATGAGACCGT",2,72.3,10.08,-0.75,0.06,2.74,1.02,0,">1 nonsynonymous","W106I L122E",2
"lib2","SARS-CoV-2","CTAGCTATTGAAGGTG",3,39.28,10.42,-0.41,0.06,2.72,1.01,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","CTAGCTCCCTGCAATA",3,33.21,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V103F R136F",2
"lib2","SARS-CoV-2","CTAGCTCCTTTCCTAC",3,19.43,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D90Y F167L",2
"lib2","SARS-CoV-2","CTAGCTGGTACCAAAT",6,30.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5K F12G S36T A89Y W106S S147L",6
"lib2","SARS-CoV-2","CTAGCTGTACATCCTG",4,0.53,NA,NA,NA,NA,NA,NA,"stop","G86* N120L I142M F156S",4
"lib2","SARS-CoV-2","CTAGCTTGCCCTCCAC",3,57.66,10.86,0.02,0.08,2.98,1.05,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","CTAGCTTGTTAATTCG",11,184.95,10.9,0.06,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGGAAACATTTGAA",3,17.21,8.74,-2.1,0.18,1.9,1.08,0.01,">1 nonsynonymous","I2N S69W S129L F156L",4
"lib2","SARS-CoV-2","CTAGGAAATAATCAAC",12,78.22,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","T63L A89T P96W",3
"lib2","SARS-CoV-2","CTAGGAAATAGTGATC",2,35.87,10.87,0.04,0.07,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAGGAACCTCTGCAA",9,306.8,10.65,-0.18,0.02,2.92,1.05,0,">1 nonsynonymous","L122R P149I F160L",3
"lib2","SARS-CoV-2","CTAGGAATAATACATG",4,95.73,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5S T63G N107W Y119A",4
"lib2","SARS-CoV-2","CTAGGACACATTTGTA",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S36E L122S",3
"lib2","SARS-CoV-2","CTAGGACTACAAACAG",11,0.9,NA,NA,NA,NA,NA,NA,"stop","F99L N151*",2
"lib2","SARS-CoV-2","CTAGGAGATACATCCT",8,557.65,10.7,-0.14,0.03,2.96,1.04,0,">1 nonsynonymous","Y39I S43V T140K A190V",4
"lib2","SARS-CoV-2","CTAGGAGCCCTTTTCA",3,101.12,10.83,0,0.06,2.96,1.05,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","CTAGGAGCTCCTGTCA",5,92.01,10.74,-0.1,0.05,2.87,1.13,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","CTAGGAGGTGAGCCAT",2,19.27,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","G101E",1
"lib2","SARS-CoV-2","CTAGGAGTACTAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* N92T Y175N",3
"lib2","SARS-CoV-2","CTAGGAGTTTAAAGAA",6,95.09,7.62,-3.21,0.2,1.5,1.06,0.01,">1 nonsynonymous","F44A S113H",2
"lib2","SARS-CoV-2","CTAGGATGACCCTAAC",2,38.83,10.13,-0.7,0.1,2.51,1.01,0,">1 nonsynonymous","T55S E135L T201V",3
"lib2","SARS-CoV-2","CTAGGATTACCTTTTC",3,20.9,10.74,-0.09,0.14,2.88,1,0.01,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","CTAGGCAAATGCACTA",3,29.25,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y39P P96T W106L Y143R Q176T",5
"lib2","SARS-CoV-2","CTAGGCAAGAAAGTGA",6,65.23,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R73F I88K G174M",3
"lib2","SARS-CoV-2","CTAGGCACCCCAAAAA",3,38.6,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T55C P96S K114P N130V Y165S T201H",6
"lib2","SARS-CoV-2","CTAGGCAGGGTGGGAC",3,21.38,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","Y143P",1
"lib2","SARS-CoV-2","CTAGGCCATTAAATAT",4,19.65,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R73K F99I E135L",3
"lib2","SARS-CoV-2","CTAGGCCGTAAACTAT",32,352.73,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S113K N157H",2
"lib2","SARS-CoV-2","CTAGGCGCACGTGACC",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* F47L C61I N92T G146F C158K",6
"lib2","SARS-CoV-2","CTAGGCGTATAGACAA",1,37.68,10.81,-0.02,0.07,2.85,1.15,0,">1 nonsynonymous","A14N N130K I138L",3
"lib2","SARS-CoV-2","CTAGGCTCGATGCCAG",8,2.4,NA,NA,NA,NA,NA,NA,"stop","N1L Y35* D112T",3
"lib2","SARS-CoV-2","CTAGGCTGTTAGCATT",1,77.94,10.83,0,0.08,2.9,1.12,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","CTAGGCTTATGCTACA",3,71.95,10.34,-0.5,0.03,2.84,1.09,0,">1 nonsynonymous","N40T S129P V153L",3
"lib2","SARS-CoV-2","CTAGGGAATAGACATA",7,58.41,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D75N W106M F167E C195F",4
"lib2","SARS-CoV-2","CTAGGGAGAGGTTGAT",2,73.8,10.82,-0.01,0.05,2.9,1.11,0,">1 nonsynonymous","G152S P197L",2
"lib2","SARS-CoV-2","CTAGGGAGGCTAAACA",4,5.53,NA,NA,NA,NA,NA,NA,"stop","V37S Y119G F134* A192T",4
"lib2","SARS-CoV-2","CTAGGGATGCGTAATC",1,36.93,6.83,-4.01,0.43,1.5,1.17,0.03,">1 nonsynonymous","C61G D90E S113M N118L F160R",5
"lib2","SARS-CoV-2","CTAGGGCAAACGTAGT",9,214.66,8.79,-2.05,0.05,2.96,1.08,0,">1 nonsynonymous","F126Q I142V",2
"lib2","SARS-CoV-2","CTAGGGCATAGAGAAT",3,42.94,10.68,-0.15,0.06,2.9,1.09,0,">1 nonsynonymous","K128P Q144N",2
"lib2","SARS-CoV-2","CTAGGGCATCTAATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N64F V77* F156I A192E",4
"lib2","SARS-CoV-2","CTAGGGGTTTCTAGAA",3,22.29,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","Y35R S41I I80F P149G",4
"lib2","SARS-CoV-2","CTAGGGTACTCTAAAA",2,111.38,10.7,-0.13,0.03,2.95,1.07,0,">1 nonsynonymous","S43L F62T V153S",3
"lib2","SARS-CoV-2","CTAGGTAATGAGAAAT",8,8.69,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13C A22W P54Y C61T A89C",5
"lib2","SARS-CoV-2","CTAGGTAATTGAACCG",19,210.29,9.74,-1.09,0.04,2.77,1.05,0,">1 nonsynonymous","K128Q Q144Y",2
"lib2","SARS-CoV-2","CTAGGTACCGAGCTGA",9,179.85,10.44,-0.4,0.06,2.41,1.09,0,">1 nonsynonymous","A42L N151Y",2
"lib2","SARS-CoV-2","CTAGGTACCTATATTT",3,1.76,NA,NA,NA,NA,NA,NA,"stop","R16V L95W I142*",3
"lib2","SARS-CoV-2","CTAGGTACGGGCAACA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","C61* N118V P177*",3
"lib2","SARS-CoV-2","CTAGGTAGAAATAGCA",34,568.47,10.83,-0.01,0.04,2.95,1.06,0,">1 nonsynonymous","V37R Q84S",2
"lib2","SARS-CoV-2","CTAGGTAGTCTTTGTG",4,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A A89C I104D",3
"lib2","SARS-CoV-2","CTAGGTGAAATATCAA",8,126.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68E V77E G101V G146M",4
"lib2","SARS-CoV-2","CTAGGTGAGGTATGCA",4,1.94,NA,NA,NA,NA,NA,NA,"stop","S19G N58F T85M D90P E154*",5
"lib2","SARS-CoV-2","CTAGGTGATGCTAAAA",5,53.1,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","W23T A81G A105I T170P V181I",5
"lib2","SARS-CoV-2","CTAGGTGGCAACTAGG",4,10.83,10.78,-0.06,0.04,3,1.01,0,">1 nonsynonymous","L5D Y35L F47M K56T",4
"lib2","SARS-CoV-2","CTAGGTGGTGGGTTAT",9,127.64,8.24,-2.59,0.11,2.2,1.11,0,"1 nonsynonymous","Y143K",1
"lib2","SARS-CoV-2","CTAGGTGTGGTATTAA",18,297.91,10.86,0.02,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CTAGGTTATACTCGCC",7,55.89,9.17,-1.67,0.11,2.37,1.06,0.01,">1 nonsynonymous","L60N Y121S",2
"lib2","SARS-CoV-2","CTAGTAAAACTTTTAC",14,51.55,6,-4.84,2,3,1.15,0,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","CTAGTAAAATATAAAC",4,77.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A33L K56R E154V Y175R",4
"lib2","SARS-CoV-2","CTAGTAAACGTTTGCA",6,0.18,NA,NA,NA,NA,NA,NA,"stop","R27T G83S L95* F156Y",4
"lib2","SARS-CoV-2","CTAGTAAACTCAAGAG",4,38.92,10.32,-0.52,0.1,2.61,1.17,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","CTAGTAAATATAGGTA",4,60.39,10.33,-0.51,0.05,2.89,1.04,0,">1 nonsynonymous","T15Y I138V",2
"lib2","SARS-CoV-2","CTAGTAAATTGTCCGT",2,2.81,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","CTAGTAACGGAATTGT",7,87.88,10.82,-0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGTAACTGCATATA",3,93.61,10.59,-0.25,0.06,2.93,1,0,">1 nonsynonymous","A33W T100I F167Y T201S",4
"lib2","SARS-CoV-2","CTAGTAAGAACAACAT",1,46.36,10.3,-0.54,0.03,2.97,1.05,0,">1 nonsynonymous","K87M S147R",2
"lib2","SARS-CoV-2","CTAGTAAGTTCCAATT",7,0.46,NA,NA,NA,NA,NA,NA,"stop","S19Q G51E A105*",3
"lib2","SARS-CoV-2","CTAGTAATAGAGAGAG",5,47.99,9.41,-1.43,0.07,2.85,1.06,0.01,">1 nonsynonymous","A22W A33V L125A S147C",4
"lib2","SARS-CoV-2","CTAGTAATTTGTGACT",5,80.65,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C31R P54S Y91S L95T Y178T S200K",6
"lib2","SARS-CoV-2","CTAGTACAATCTCACA",6,54.35,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G101T N110K G117C Y165F A190V",5
"lib2","SARS-CoV-2","CTAGTACCACACAGAC",2,59.68,10.22,-0.62,0.04,2.83,1.06,0,">1 nonsynonymous","R27W S41G K56R",3
"lib2","SARS-CoV-2","CTAGTACTCAGCGCGA",2,11.21,8.26,-2.57,0.13,2.33,1,0.01,">1 nonsynonymous","A18T F160W G166L",3
"lib2","SARS-CoV-2","CTAGTACTTATGAAAA",1,14.93,6,-4.84,1.11,2.89,1.21,0.01,">1 nonsynonymous","C6N F167L V173L",3
"lib2","SARS-CoV-2","CTAGTACTTGATCATA",1,10.48,8.91,-1.93,0.22,1.5,1.17,0.04,">1 nonsynonymous","S19R P54G C61R",3
"lib2","SARS-CoV-2","CTAGTATAAACAGCCG",6,46.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L95R F134S S200H",3
"lib2","SARS-CoV-2","CTAGTATAACATAATT",5,101.32,10.67,-0.17,0.02,2.94,1.05,0,">1 nonsynonymous","S41G D97N",2
"lib2","SARS-CoV-2","CTAGTATAAGTTCGCA",5,136.55,10.79,-0.04,0.06,2.9,1.13,0,">1 nonsynonymous","N110S T148E T201Y",3
"lib2","SARS-CoV-2","CTAGTATAATCGCAAT",3,35.02,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G152S F167L G174Q A190V",4
"lib2","SARS-CoV-2","CTAGTATATAACATAG",1,32.29,10.3,-0.53,0.07,2.7,1.09,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","CTAGTATATAGAAATC",15,327.04,10.37,-0.46,0.03,2.9,1.09,0,">1 nonsynonymous","N4K G155N",2
"lib2","SARS-CoV-2","CTAGTATATTAGAGAA",2,13.06,6.31,-4.52,0.97,1.5,1.2,0.05,">1 nonsynonymous","C6D I28F F99M",3
"lib2","SARS-CoV-2","CTAGTATCATATGAGT",1,20.64,6,-4.84,2,3,1.05,0,">1 nonsynonymous","L38R K56M A67C Y91T S113W Y119V E154W",7
"lib2","SARS-CoV-2","CTAGTATCGATGATCC",14,117.03,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L60R Y93M N157G G174A",4
"lib2","SARS-CoV-2","CTAGTATCGCCTCTGC",4,70.33,10.81,-0.02,0.05,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGTATGAAATCTTA",3,0.42,NA,NA,NA,NA,NA,NA,"stop","Y91V N107* K128F G146*",4
"lib2","SARS-CoV-2","CTAGTATGACAATAAT",7,104.84,10.31,-0.53,0.04,2.9,1.01,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","CTAGTATGGCAAGTGC",4,100.74,10.77,-0.06,0.04,3,1.01,0,">1 nonsynonymous","I28W Q144N S200E",3
"lib2","SARS-CoV-2","CTAGTATTCGAAATCT",5,60.63,10.77,-0.07,0.04,2.91,1.09,0,"1 nonsynonymous","D98Q",1
"lib2","SARS-CoV-2","CTAGTCAAATCAAAAC",10,140.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I88S S129G I142Q",3
"lib2","SARS-CoV-2","CTAGTCAACTATCGCA",2,54.08,10.77,-0.07,0.04,2.89,1.12,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","CTAGTCACATACTCAC",3,66.24,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y91W F99W L125R E154S P177M",5
"lib2","SARS-CoV-2","CTAGTCACTAAAATCA",2,14.22,6.83,-4,0.17,2.22,1.01,0,">1 nonsynonymous","P7T R78D T85L G146K N151L",5
"lib2","SARS-CoV-2","CTAGTCAGATACTAAG",1,6.29,9.77,-1.06,0.18,2.27,1,0.01,"1 nonsynonymous","V77A",1
"lib2","SARS-CoV-2","CTAGTCATAGACAAAT",5,47.84,10.07,-0.76,0.02,2.97,1.01,0,">1 nonsynonymous","S41A T55H G83K P169F",4
"lib2","SARS-CoV-2","CTAGTCATCGCGCACG",5,158.91,10.25,-0.58,0.04,2.87,1.05,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","CTAGTCCATCAGCAAA",5,112.11,10.9,0.07,0.05,2.97,1.05,0,"1 nonsynonymous","K199I",1
"lib2","SARS-CoV-2","CTAGTCCTTCTAATGC",3,10.29,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D59L Y66S Y121N K198R",4
"lib2","SARS-CoV-2","CTAGTCGCACCGCGTT",3,23.3,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V103D L122E",2
"lib2","SARS-CoV-2","CTAGTCGCGAAATGAC",10,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N N40Y V103L P161L",4
"lib2","SARS-CoV-2","CTAGTCGGTTCCTTTG",2,5.56,10.64,-0.19,0.19,2.98,1.09,0.01,">1 nonsynonymous","A42D D98L",2
"lib2","SARS-CoV-2","CTAGTCTAATAACCCA",6,48.56,7.06,-3.78,0.26,1.5,1.13,0.01,">1 nonsynonymous","N1R R127S G155C",3
"lib2","SARS-CoV-2","CTAGTCTCCATATGGT",3,31.71,10.1,-0.74,0.1,2.41,1,0.01,">1 nonsynonymous","A42T L162C",2
"lib2","SARS-CoV-2","CTAGTCTGATAAAATA",5,8.35,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V65F Y119R N130Y R179F T201K",5
"lib2","SARS-CoV-2","CTAGTCTGGAGGATGA",7,72.13,9.6,-1.23,0.1,2.09,1.06,0,">1 nonsynonymous","V11S K56R E141S",3
"lib2","SARS-CoV-2","CTAGTCTTTCACTAGC",4,58.48,10.24,-0.59,0.03,2.99,1.02,0,">1 nonsynonymous","V37K S113G",2
"lib2","SARS-CoV-2","CTAGTGAAACGCGGAA",5,90.99,10.16,-0.68,0.06,2.53,1.08,0,"1 nonsynonymous","E135I",1
"lib2","SARS-CoV-2","CTAGTGAACCTGATGA",12,208.38,10.85,0.02,0.05,2.91,1.1,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","CTAGTGAATGCGCATA",3,55.78,10.93,0.09,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGTGACCCAAAGGC",2,37.62,10.14,-0.69,0.08,2.91,1.12,0,">1 nonsynonymous","I138V T148D F156L",3
"lib2","SARS-CoV-2","CTAGTGATGGCCCACG",4,18.77,10.21,-0.62,0.04,2.85,1.02,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","CTAGTGATTTCAAGGC",9,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D S45F",2
"lib2","SARS-CoV-2","CTAGTGATTTGTCGAA",5,76.03,10.78,-0.06,0.04,2.94,1.08,0,">1 nonsynonymous","A22S T148A",2
"lib2","SARS-CoV-2","CTAGTGCCTTAATCAA",6,37.82,9.39,-1.45,0.19,1.71,1.15,0.01,">1 nonsynonymous","P7S S45V S69M Y91F",4
"lib2","SARS-CoV-2","CTAGTGCGGGAAATGC",4,102.91,10.77,-0.07,0.04,2.97,1.06,0,">1 nonsynonymous","L122Q E154L",2
"lib2","SARS-CoV-2","CTAGTGCTTTGCCAGT",2,366.57,10.09,-0.74,0.04,2.77,1.04,0,">1 nonsynonymous","G9W V37C N151I",3
"lib2","SARS-CoV-2","CTAGTGGATTACTAAT",1,22.15,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","V32A I88A T100L T148C",4
"lib2","SARS-CoV-2","CTAGTGTCCTCGCGTT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53P I104R R136P Y143L",4
"lib2","SARS-CoV-2","CTAGTGTGTTGACGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3W S36* D68M T170I",4
"lib2","SARS-CoV-2","CTAGTGTTACGGTCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4K F47I N110M E141M Q168D R179*",6
"lib2","SARS-CoV-2","CTAGTGTTCAATATTT",8,52.62,7.53,-3.31,0.46,1.5,1.1,0.07,">1 nonsynonymous","R16M F99T S200P",3
"lib2","SARS-CoV-2","CTAGTTAAAATATACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A A67D S69W",3
"lib2","SARS-CoV-2","CTAGTTAAATTATCGA",4,10.58,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C61P I104S Y143R",3
"lib2","SARS-CoV-2","CTAGTTAAGAAATCTT",2,70.2,10.86,0.03,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGTTAAGTAATCAC",5,44.81,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40G R73E A81T",3
"lib2","SARS-CoV-2","CTAGTTAATCTTGGCT",6,72.22,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","G9E N13G N151C Q176V",4
"lib2","SARS-CoV-2","CTAGTTACAATGGTGA",10,135.73,8.25,-2.59,0.12,2,1.13,0,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","CTAGTTACATATTCAC",5,1.71,NA,NA,NA,NA,NA,NA,"stop","A33Q T85* S147K C158G",4
"lib2","SARS-CoV-2","CTAGTTACGCCAGAAT",4,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87G S108T P161G",3
"lib2","SARS-CoV-2","CTAGTTACTGGTAAAC",7,79.34,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N64F I88R",2
"lib2","SARS-CoV-2","CTAGTTAGGAGTAAGG",6,212.71,9.47,-1.37,0.05,2.8,1.08,0,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","CTAGTTAGTAAAAGAA",4,88.26,10.56,-0.27,0.05,2.92,1.1,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","CTAGTTAGTATCCACT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S T140L",2
"lib2","SARS-CoV-2","CTAGTTATACCGAGGC",8,148.14,9.89,-0.94,0.06,2.54,1.08,0,">1 nonsynonymous","E141L Y178M",2
"lib2","SARS-CoV-2","CTAGTTATCAATCCAA",6,125.27,10.92,0.08,0.05,2.94,1.06,0,"1 nonsynonymous","E76Q",1
"lib2","SARS-CoV-2","CTAGTTATCTCCAGCA",4,31.68,8.09,-2.75,0.14,2.06,1.1,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","CTAGTTATGATAATGG",2,12.67,10.4,-0.44,0.13,2.88,1.04,0.01,">1 nonsynonymous","A22T I138A",2
"lib2","SARS-CoV-2","CTAGTTCAAACAGATC",1,30.13,10.74,-0.09,0.03,2.97,1.05,0,"1 nonsynonymous","T3Y",1
"lib2","SARS-CoV-2","CTAGTTCAACAAAAAA",9,76.02,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y66Q F167R",2
"lib2","SARS-CoV-2","CTAGTTCAACAGGAGG",14,251.06,9.64,-1.19,0.05,2.05,1.07,0,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","CTAGTTCTCCTCGAAA",5,7.91,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","K56R N120K V182G",3
"lib2","SARS-CoV-2","CTAGTTGACACAGACG",2,23.3,6.65,-4.18,0.44,1.5,1.18,0.03,">1 nonsynonymous","D90L D97F T148S G152T T201V",5
"lib2","SARS-CoV-2","CTAGTTGACAGAAAAT",3,28.94,9.37,-1.46,0.09,1.92,1.03,0,">1 nonsynonymous","Y39P G51S C61W",3
"lib2","SARS-CoV-2","CTAGTTGCACGACCAA",3,54.72,10.69,-0.15,0.06,2.91,1.09,0,"1 nonsynonymous","Y121H",1
"lib2","SARS-CoV-2","CTAGTTGTAAACAGAG",13,261.46,9.79,-1.04,0.07,2.12,1.04,0,">1 nonsynonymous","V11A N40A",2
"lib2","SARS-CoV-2","CTAGTTTAAGTTCCGC",26,187.94,6.06,-4.77,1.16,1.5,1.26,0.03,">1 nonsynonymous","A14D F44S Y143R",3
"lib2","SARS-CoV-2","CTAGTTTAGATAACCG",4,28.31,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Q84H A89I Y123R R136V",4
"lib2","SARS-CoV-2","CTAGTTTATGCGCACC",1,33.38,9.89,-0.95,0.07,2.3,1,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","CTAGTTTCAGGGTTGA",3,39.03,9.8,-1.03,0.03,2.98,1.03,0,">1 nonsynonymous","K48R K114N G174T",3
"lib2","SARS-CoV-2","CTAGTTTCGGTCATAT",7,179.2,10.8,-0.04,0.03,3,1.03,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","CTAGTTTTCGTAGAGC",2,44.22,10.87,0.04,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTAGTTTTGTAAAATA",9,154.24,10.24,-0.6,0.03,2.92,1.06,0,"1 nonsynonymous","C31T",1
"lib2","SARS-CoV-2","CTATAAAAACTCCGAA",3,38.25,10.86,0.02,0.11,2.89,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAAAAATAGATTG",3,103.45,10.47,-0.37,0.05,2.91,1.01,0,">1 nonsynonymous","D90N D98L",2
"lib2","SARS-CoV-2","CTATAAAACACTCTAC",1,8.04,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C6F S69I K87V L95E G155L G166V T201G",7
"lib2","SARS-CoV-2","CTATAAAACGATAAAA",5,22,8.85,-1.99,0.26,1.5,1.17,0.02,">1 nonsynonymous","E10D P96I",2
"lib2","SARS-CoV-2","CTATAAAATAATGTCA",1,29.28,9.99,-0.85,0.11,2.17,1.14,0,">1 nonsynonymous","K94M F160Q T201N",3
"lib2","SARS-CoV-2","CTATAAAATGATGTAT",9,158.16,10.81,-0.03,0.03,2.93,1.07,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","CTATAAAATTCGAACT",4,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R P54L V65H D98T Y178Q",5
"lib2","SARS-CoV-2","CTATAAACAGATGGTG",2,28.43,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","C6I G86T G116C",3
"lib2","SARS-CoV-2","CTATAAACCCCTATGT",3,55.12,10.21,-0.63,0.06,2.74,1.09,0,"1 nonsynonymous","P133Y",1
"lib2","SARS-CoV-2","CTATAAACGCATAAAA",2,30.6,10.84,0.01,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAAACGCATACTG",2,60.49,10.59,-0.24,0.05,2.94,1.05,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","CTATAAACGGTTCATG",2,16.26,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F12N V77K V103L G117I P149F",5
"lib2","SARS-CoV-2","CTATAAACGTAAAAAG",3,42.07,9.19,-1.65,0.06,2.85,1.13,0,">1 nonsynonymous","N58H Y119P",2
"lib2","SARS-CoV-2","CTATAAACTTGAAAAT",3,25.02,6.33,-4.5,0.74,1.5,1.32,0.04,">1 nonsynonymous","D68Q T85S",2
"lib2","SARS-CoV-2","CTATAAAGAATTGAGC",2,1.2,NA,NA,NA,NA,NA,NA,"stop","S43P P54H F62C P96* N107P T148P V153C",7
"lib2","SARS-CoV-2","CTATAAAGATAGAGTC",5,87.04,10.94,0.1,0.04,2.98,1.03,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","CTATAAAGCCCATAAA",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39K K56N L95C N171Y",4
"lib2","SARS-CoV-2","CTATAAAGTTTATCAA",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96V F160R",2
"lib2","SARS-CoV-2","CTATAAATACACTTTA",4,22.02,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","G83R D90H D98V V103R",4
"lib2","SARS-CoV-2","CTATAAATATAGACCA",11,75.09,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","F17L C150K Y178I",3
"lib2","SARS-CoV-2","CTATAAATCGACAAAA",13,177.56,10.82,-0.01,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAAATTCTATATA",3,46.27,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6V F12I N24L S41C N120V F160M G174V C195H",8
"lib2","SARS-CoV-2","CTATAACACTAATGGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","CTATAACCTGGTTGAT",12,221.04,10.22,-0.61,0.05,2.75,1.08,0,">1 nonsynonymous","A22S F44S",2
"lib2","SARS-CoV-2","CTATAACCTTAAATCT",11,2.38,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib2","SARS-CoV-2","CTATAACCTTAACATT",3,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P F99L S139L",3
"lib2","SARS-CoV-2","CTATAACCTTACAATC",3,23.67,8.09,-2.75,0.34,1.5,1.17,0.04,">1 nonsynonymous","V20L F160M",2
"lib2","SARS-CoV-2","CTATAACGAGGGGATC",3,12.77,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T15W K56N S139L Y143T",4
"lib2","SARS-CoV-2","CTATAACGTCGCAACT",2,19.81,11.04,0.21,0.08,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAACTAAGGACCA",1,32.07,9.64,-1.2,0.1,2.05,1.16,0,">1 nonsynonymous","A18V A42W C61V A105S",4
"lib2","SARS-CoV-2","CTATAACTCAACACCG",12,182.26,9.16,-1.68,0.05,2.86,1.07,0,">1 nonsynonymous","T3N T170L K199E",3
"lib2","SARS-CoV-2","CTATAACTCAGCTTTT",2,15.38,7.17,-3.67,0.13,1.5,1.02,0.01,">1 nonsynonymous","C61E W106R L122V G155P",4
"lib2","SARS-CoV-2","CTATAACTTTAACAAA",11,34.42,9.69,-1.14,0.11,2.07,1.08,0.01,">1 nonsynonymous","D34S K94R N120L",3
"lib2","SARS-CoV-2","CTATAAGATTGATAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N24G K48H V52I T201*",4
"lib2","SARS-CoV-2","CTATAAGCCACAGAAC",4,33.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T140S P149E F167S",3
"lib2","SARS-CoV-2","CTATAAGGACATTAAG",1,66.75,7.24,-3.59,0.13,1.83,1.12,0,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","CTATAAGGCTTTGTTC",11,131.02,8.55,-2.29,0.11,3,1.06,0.01,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","CTATAAGTAAGATTGT",4,45.36,6.08,-4.75,1,1.5,1.2,0.02,">1 nonsynonymous","V11R N64K A145C",3
"lib2","SARS-CoV-2","CTATAAGTAGGTCTTC",6,82.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P54S F62K V103F",3
"lib2","SARS-CoV-2","CTATAAGTTAACATAA",2,34.25,8.14,-2.7,0.12,1.75,1.05,0,">1 nonsynonymous","Y50N A67L F156T",3
"lib2","SARS-CoV-2","CTATAAGTTAATGAAT",3,25.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N30R N40K N64L G83I Q144S",5
"lib2","SARS-CoV-2","CTATAAGTTACCCAAT",4,16.72,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","P7A F62V V103D I142L T201S",5
"lib2","SARS-CoV-2","CTATAATAAACAAACC",1,5.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","CTATAATAATAATTGA",1,9.08,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","D68G G155Y",2
"lib2","SARS-CoV-2","CTATAATATAGAAAAG",2,32.07,10.85,0.02,0.14,2.69,1.07,0.01,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","CTATAATCACATCGGA",15,145.41,10.56,-0.28,0.03,2.95,1.04,0,"1 nonsynonymous","F134A",1
"lib2","SARS-CoV-2","CTATAATCCCAAAAAT",3,33.38,10.87,0.03,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAATCCCGGTTAC",17,352.71,6.93,-3.91,0.14,1.5,1.12,0,">1 nonsynonymous","V37M Q84K Y159R",3
"lib2","SARS-CoV-2","CTATAATCTAATCACT",1,12.45,9.4,-1.44,0.28,1.5,1.1,0.03,">1 nonsynonymous","F12V A81H",2
"lib2","SARS-CoV-2","CTATAATGATAATTAT",4,25.24,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K26P S69R L95Q Y123N L162Q",5
"lib2","SARS-CoV-2","CTATAATGCCAACTGA",3,34.82,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","N107H Y121A N130L R136P",4
"lib2","SARS-CoV-2","CTATAATGCCGCCACA",3,80.62,10.06,-0.78,0.05,2.82,1.01,0,">1 nonsynonymous","A14N L60V Q144D",3
"lib2","SARS-CoV-2","CTATAATTAGCCAACA",1,12.02,10.83,-0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAATTATTCAAAT",2,20.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10T N107A C150L Y178N",4
"lib2","SARS-CoV-2","CTATACAAATAGTTTC",5,68.31,8.29,-2.55,0.13,2.41,1.09,0.01,">1 nonsynonymous","S41D L122K P161R",3
"lib2","SARS-CoV-2","CTATACAACACATGAC",4,36.27,8.51,-2.33,0.12,3,1.05,0.01,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","CTATACAACATGCCTA",3,75.18,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F12H F44Y K56Q N110T P161G K198V",6
"lib2","SARS-CoV-2","CTATACACGAGTTTGT",18,295.78,10.58,-0.25,0.03,2.96,1.03,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","CTATACACGGCAAACG",6,122.23,10.78,-0.05,0.05,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CTATACACTGGCTACC",4,65.31,9.32,-1.52,0.09,1.89,1.03,0,">1 nonsynonymous","P7D S19V",2
"lib2","SARS-CoV-2","CTATACACTTTCTTTT",3,0,NA,NA,NA,NA,NA,NA,"stop","L5S F17N V37M S45C K94* C158K",6
"lib2","SARS-CoV-2","CTATACAGCACTTTAA",12,4.5,NA,NA,NA,NA,NA,NA,"stop","D34L K48H S113*",3
"lib2","SARS-CoV-2","CTATACAGTTTAAAAA",9,1.34,NA,NA,NA,NA,NA,NA,"stop","F44* K56Q K128I I142G",4
"lib2","SARS-CoV-2","CTATACATATACAACG",3,16.79,7.5,-3.33,0.21,1.5,1.09,0.01,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","CTATACATATCTATAG",2,45.68,10.36,-0.48,0.09,2.85,1.13,0,">1 nonsynonymous","T15D N120D",2
"lib2","SARS-CoV-2","CTATACATTATGAAAA",2,21.97,6,-4.84,2,3,1.06,0,">1 nonsynonymous","T85D K94I P149L",3
"lib2","SARS-CoV-2","CTATACCAACCGTTCA",5,9.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S S19K A33M",3
"lib2","SARS-CoV-2","CTATACCAAGTGCGGC",4,93.65,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C102Y F126H E154R T170P",4
"lib2","SARS-CoV-2","CTATACCATCATTATA",12,125.41,6.08,-4.75,0.77,1.5,1.16,0.01,">1 nonsynonymous","K87D V180F",2
"lib2","SARS-CoV-2","CTATACCATCCGGGAA",1,16.44,8.19,-2.65,0.37,2.32,1.24,0.02,">1 nonsynonymous","C6S F12I K56L I72Y A81Q W106L F126H G174W",8
"lib2","SARS-CoV-2","CTATACCCAGAACAGA",7,89.35,10.79,-0.05,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATACCCCGTTTAAT",7,104.85,10.75,-0.08,0.04,2.97,1.04,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","CTATACCCTATTATTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","A22M Y39L V77* L122G",4
"lib2","SARS-CoV-2","CTATACCGTAAATATT",3,23.96,10.74,-0.1,0.05,2.91,1.1,0,">1 nonsynonymous","V32K S129G K198D",3
"lib2","SARS-CoV-2","CTATACCGTCCACAAC",7,94.13,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","F62H I88N Y143K G166S",4
"lib2","SARS-CoV-2","CTATACCGTTACAGGG",1,46.14,9.29,-1.54,0.04,2.9,1.09,0,">1 nonsynonymous","Y119E G166T",2
"lib2","SARS-CoV-2","CTATACGAAGGATTAA",1,16.2,6.03,-4.81,1.11,1.5,1.12,0.03,">1 nonsynonymous","F12H A81I G155L",3
"lib2","SARS-CoV-2","CTATACGAGGACAGCC",5,73.66,9.91,-0.92,0.06,2.61,1.03,0,">1 nonsynonymous","F44V S53A N120D P149M S184N",5
"lib2","SARS-CoV-2","CTATACGATATCTTAG",2,89.97,10.46,-0.38,0.04,2.93,1.05,0,">1 nonsynonymous","G152D F160D",2
"lib2","SARS-CoV-2","CTATACGGCTCGGGGC",8,64.28,8.36,-2.48,0.1,1.94,1.08,0,">1 nonsynonymous","T15G E135I F156K",3
"lib2","SARS-CoV-2","CTATACGGTTTCTTCC",9,219.2,10.82,-0.01,0.03,2.94,1.08,0,">1 nonsynonymous","T140R T148R",2
"lib2","SARS-CoV-2","CTATACGTCACCAATT",3,31.39,9.24,-1.6,0.14,1.7,1.08,0.01,">1 nonsynonymous","R27M D34V N120W H189P",4
"lib2","SARS-CoV-2","CTATACGTCACTACGA",2,25.54,8.27,-2.57,0.32,1.5,1,0.04,">1 nonsynonymous","S53E K114P P133R",3
"lib2","SARS-CoV-2","CTATACTAACCCATAT",4,124.48,10.77,-0.06,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATACTATATTGAGA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","T46K I88* L95A R136T",4
"lib2","SARS-CoV-2","CTATACTCAAAACAAA",1,0.78,NA,NA,NA,NA,NA,NA,"stop","N1K L95F R127I E135* Q168I",5
"lib2","SARS-CoV-2","CTATACTCATACTACT",6,3.17,NA,NA,NA,NA,NA,NA,"stop","N13L K56* E135H",3
"lib2","SARS-CoV-2","CTATACTCATCAGAAG",2,52.85,9.85,-0.98,0.08,2.32,1.06,0,">1 nonsynonymous","D90V H189S G196M",3
"lib2","SARS-CoV-2","CTATACTGAACACCAC",5,42.49,10.76,-0.08,0.05,3,1.03,0,">1 nonsynonymous","C61K S164Y P197T",3
"lib2","SARS-CoV-2","CTATAGAAACTGAATG",1,75.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7L V37H S45R L95K F156M Y165D",6
"lib2","SARS-CoV-2","CTATAGAAAGATTACC",9,41.75,7.02,-3.81,0.33,1.5,1.18,0.02,">1 nonsynonymous","A67S W106T",2
"lib2","SARS-CoV-2","CTATAGAACAATGTGG",3,60.47,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","K48G D90E G101V F156I P177L",5
"lib2","SARS-CoV-2","CTATAGAAGAACGTTT",4,39.84,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L57D A105R V115Y",3
"lib2","SARS-CoV-2","CTATAGAGAGTACAAG",1,15.65,10.41,-0.43,0.12,2.8,1.18,0.01,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","CTATAGAGATAGCCTA",4,34.6,9.37,-1.47,0.19,1.85,1.12,0.01,">1 nonsynonymous","L38T N120L",2
"lib2","SARS-CoV-2","CTATAGAGGAAACAGG",3,10.73,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F62C L95M S113V D137E",4
"lib2","SARS-CoV-2","CTATAGATGCTGCCAA",1,1.95,NA,NA,NA,NA,NA,NA,"stop","P161* Y175*",2
"lib2","SARS-CoV-2","CTATAGATTCTATTTG",2,60.79,10.79,-0.04,0.05,2.97,1.07,0,">1 nonsynonymous","N4P P149N V173L",3
"lib2","SARS-CoV-2","CTATAGATTGAGGGCA",15,3.7,NA,NA,NA,NA,NA,NA,"stop","L5S D59R L125* C150L Q176*",5
"lib2","SARS-CoV-2","CTATAGCCCAGGGCAT",6,0,NA,NA,NA,NA,NA,NA,"stop","G86V D137Y Y165E T170V T201*",5
"lib2","SARS-CoV-2","CTATAGCCCTCCAGAT",3,17.89,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G9I V103M K114Q A145D N157A",5
"lib2","SARS-CoV-2","CTATAGCGCTGCAAAC",9,81.06,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14D N24L D97F R127H V173L",5
"lib2","SARS-CoV-2","CTATAGCGTAAAATTA",1,23.76,10.81,-0.02,0.07,2.98,1.03,0,"1 nonsynonymous","K199R",1
"lib2","SARS-CoV-2","CTATAGCGTATGTCGA",9,113.23,10.81,-0.03,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATAGCGTATTTGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61R C102*",2
"lib2","SARS-CoV-2","CTATAGCTACAAACAA",1,31.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3I S19L I28K Y35Q",4
"lib2","SARS-CoV-2","CTATAGCTTGAGTGAA",1,16.38,10.53,-0.31,0.06,2.94,1,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","CTATAGGACGATGGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K A22S V37E",3
"lib2","SARS-CoV-2","CTATAGGCACTATGCA",3,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q T148W C158L",3
"lib2","SARS-CoV-2","CTATAGGTGCATGTAA",2,49.26,10.92,0.09,0.05,2.93,1.05,0,">1 nonsynonymous","N151K T201D",2
"lib2","SARS-CoV-2","CTATAGGTGTAACCAC",2,51.91,10.17,-0.67,0.04,2.79,1.02,0,">1 nonsynonymous","S41K K56E S184D",3
"lib2","SARS-CoV-2","CTATAGGTTGACCCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R L95A F167P S200F",4
"lib2","SARS-CoV-2","CTATAGGTTGCGCGGA",1,9.08,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","T85I D112R F185N",3
"lib2","SARS-CoV-2","CTATAGTAGAGGGACC",2,34.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F8L S36L D59S P96M K128L I138M",6
"lib2","SARS-CoV-2","CTATAGTAGCAGGATT",1,25.06,10.88,0.05,0.12,2.9,1.12,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","CTATAGTCACCTAACG",2,4.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22K",1
"lib2","SARS-CoV-2","CTATAGTCATCCCCCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72N",1
"lib2","SARS-CoV-2","CTATAGTCCACACGGT",2,8.28,10.31,-0.53,0.21,2.77,1.07,0.01,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","CTATAGTTGGACCACC",4,280.57,9.36,-1.48,0.04,2.88,1.09,0,">1 nonsynonymous","D34C L125T",2
"lib2","SARS-CoV-2","CTATATAAAACATATA",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D N107Q L122M C150V",4
"lib2","SARS-CoV-2","CTATATAAATGGTTAA",3,19.91,6,-4.84,2,1.5,1.13,0.07,">1 nonsynonymous","I80K K87V D97N S108N R127V",5
"lib2","SARS-CoV-2","CTATATAAATTTAAAA",7,25.25,10.09,-0.74,0.1,2.88,1.06,0,">1 nonsynonymous","C6S A33S S129R",3
"lib2","SARS-CoV-2","CTATATAACACTATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","CTATATAACATTGGTC",3,54.57,10.83,-0.01,0.07,2.89,1.13,0,"1 nonsynonymous","S164Q",1
"lib2","SARS-CoV-2","CTATATAACCAGGAAG",4,38.33,7.39,-3.44,0.14,1.5,1.07,0.01,">1 nonsynonymous","A18S G155C Y165H",3
"lib2","SARS-CoV-2","CTATATAAGTACCCAA",2,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C T46R P54F G101R",4
"lib2","SARS-CoV-2","CTATATAATCCAACAG",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R N64W K128V C158T K198G",5
"lib2","SARS-CoV-2","CTATATAATTTTTCGA",5,39.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I80R G152C",2
"lib2","SARS-CoV-2","CTATATACATAGTAGG",7,35.33,6,-4.84,2,2.51,1.2,0.01,">1 nonsynonymous","G9P Y35N K94P W106K",4
"lib2","SARS-CoV-2","CTATATACTTAGGGCA",8,8.86,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C102R S147Y",2
"lib2","SARS-CoV-2","CTATATAGACATTAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L122* K199G",2
"lib2","SARS-CoV-2","CTATATAGATACAAGG",1,14.69,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","S19P K48S I88M Y119L",4
"lib2","SARS-CoV-2","CTATATAGCTCTGATT",11,47.01,10.85,0.01,0.06,2.89,1.08,0,"1 nonsynonymous","S147M",1
"lib2","SARS-CoV-2","CTATATAGGAATAGAG",6,67.04,8.77,-2.07,0.04,2.9,1.04,0,">1 nonsynonymous","N1V T46S Y119L",3
"lib2","SARS-CoV-2","CTATATATAAAGGAAG",1,1.13,NA,NA,NA,NA,NA,NA,"stop","I88* L131Q",2
"lib2","SARS-CoV-2","CTATATATCAAAAAGC",3,68.25,10.63,-0.2,0.04,2.92,1.06,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","CTATATCACCGACGCG",3,38.69,10.76,-0.08,0.08,2.87,1.12,0.01,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","CTATATCCAGAATACA",6,67.63,9.83,-1,0.06,2.95,1.03,0,">1 nonsynonymous","A89S E154L",2
"lib2","SARS-CoV-2","CTATATCCAGATGATC",6,72.66,10.92,0.08,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATATCGAAAAGGCG",7,98.45,10.81,-0.03,0.05,2.93,1.07,0,">1 nonsynonymous","V37L F44W N120Y",3
"lib2","SARS-CoV-2","CTATATCGGTATCCCT",3,39.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60R P82L A105T Q144H K199V",5
"lib2","SARS-CoV-2","CTATATCTTCAGCCAC",4,11.57,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","G101C K128G D137P V153L",4
"lib2","SARS-CoV-2","CTATATGAAAAGGTAA",1,27.41,10.92,0.09,0.06,2.95,1.05,0,"1 nonsynonymous","I72V",1
"lib2","SARS-CoV-2","CTATATGACACCGGCC",5,24.42,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F17L K94Q Y119H N151K",4
"lib2","SARS-CoV-2","CTATATGAGCATAACA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","T3A N30R P149* Y178A",4
"lib2","SARS-CoV-2","CTATATGCGATCTTCG",4,44.55,9.62,-1.21,0.15,1.76,1.09,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","CTATATGGGGTACGTG",1,16.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1W G9P Q144V Y178R",4
"lib2","SARS-CoV-2","CTATATGTATACATCT",6,6.83,NA,NA,NA,NA,NA,NA,"stop","N58* S69R D98A W106S G146F N157I",6
"lib2","SARS-CoV-2","CTATATGTCCTTATAC",4,28.17,10.51,-0.32,0.05,2.85,1.19,0,">1 nonsynonymous","V37Q T85P",2
"lib2","SARS-CoV-2","CTATATGTCGAACAAG",1,42.15,10.78,-0.06,0.04,2.89,1.12,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","CTATATGTGCTAACAT",10,11.8,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A42I T100F F126L K132Y C150K",5
"lib2","SARS-CoV-2","CTATATGTGTTCTACG",7,85.99,9.06,-1.77,0.06,2.81,1.06,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","CTATATGTTATTGATG",3,0,NA,NA,NA,NA,NA,NA,"stop","S29V I88* P197Q",3
"lib2","SARS-CoV-2","CTATATTAAGAACACA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","S53H A105*",2
"lib2","SARS-CoV-2","CTATATTAGATGTAGA",1,8.8,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","K26M R73L T148H L162C",4
"lib2","SARS-CoV-2","CTATATTGGAATACCC",1,37.73,10.79,-0.05,0.05,3,1.02,0,">1 nonsynonymous","N24S S41R",2
"lib2","SARS-CoV-2","CTATCAAAAATCAACC",5,56.94,9.46,-1.38,0.09,2.41,1.08,0,">1 nonsynonymous","V32F A42M K56T Y121V",4
"lib2","SARS-CoV-2","CTATCAAAGCCCAATG",4,361.05,10.83,0,0.03,2.95,1.06,0,"1 nonsynonymous","L122N",1
"lib2","SARS-CoV-2","CTATCAACCTAGAAGG",2,21.15,10.58,-0.26,0.08,2.95,1.11,0,">1 nonsynonymous","R16M F160S",2
"lib2","SARS-CoV-2","CTATCAACTAAATTCT",8,39.73,8.4,-2.43,0.09,2.1,1.04,0,">1 nonsynonymous","S41K T55Q G116R Y143L T148I",5
"lib2","SARS-CoV-2","CTATCAACTCCAGAGT",2,42.09,10.93,0.09,0.08,2.92,1.04,0,">1 nonsynonymous","Y35F K56A",2
"lib2","SARS-CoV-2","CTATCAACTGGCGGGC",7,16.33,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C6S L95R W106M",3
"lib2","SARS-CoV-2","CTATCAACTTGAATCA",5,16.35,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49L G74D T85H W106Y K114A P133S",6
"lib2","SARS-CoV-2","CTATCAAGTGTGACAT",1,2.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","CTATCAATGGAGTTAC",14,130.06,9.04,-1.8,0.08,1.86,1.1,0,">1 nonsynonymous","F12S K114E",2
"lib2","SARS-CoV-2","CTATCAATTAGAACCC",1,36.77,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V32R K94H P161C",3
"lib2","SARS-CoV-2","CTATCACAACTAGACA",3,70.76,10.79,-0.04,0.04,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CTATCACAGTGAATCA",6,79.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25S D34Q K94W",3
"lib2","SARS-CoV-2","CTATCACCTACCAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134R S147F L162Y",3
"lib2","SARS-CoV-2","CTATCACCTGTATACC",1,6.23,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G117L K132H P177V",3
"lib2","SARS-CoV-2","CTATCACTAATGCCGA",9,62.27,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35V L57N V103G S113L",4
"lib2","SARS-CoV-2","CTATCAGACAGAAACG",4,56.37,9.07,-1.76,0.16,1.67,1.07,0.01,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","CTATCAGACAGCCCCA",1,44.9,6,-4.84,1.08,1.5,1.13,0.01,">1 nonsynonymous","V37R Q84L G101A G146L A192E",5
"lib2","SARS-CoV-2","CTATCAGAGACAACGA",8,0.7,NA,NA,NA,NA,NA,NA,"stop","N4* Y91* I138V L188P",4
"lib2","SARS-CoV-2","CTATCAGAGATACCTT",8,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8P A42I K56V N107H",4
"lib2","SARS-CoV-2","CTATCAGAGCGAAAAA",8,67.47,10.57,-0.27,0.03,2.96,1.04,0,">1 nonsynonymous","D97S S164E",2
"lib2","SARS-CoV-2","CTATCAGAGGACAGTC",5,63.3,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V37W Y93T Y119D E141W",4
"lib2","SARS-CoV-2","CTATCAGAGTAATAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","A14* G51Q D98*",3
"lib2","SARS-CoV-2","CTATCAGATTAAACAA",6,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K T63I",2
"lib2","SARS-CoV-2","CTATCAGCCAAGATTA",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T S45R D90L R127I",4
"lib2","SARS-CoV-2","CTATCAGGCTTATACA",8,163.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K128L Q144L C150K",3
"lib2","SARS-CoV-2","CTATCAGTAGATATAC",14,235.63,8.55,-2.28,0.08,1.68,1.1,0,">1 nonsynonymous","Y21E N171S H189Y",3
"lib2","SARS-CoV-2","CTATCATAATCTTACT",1,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133S E141T C150M Y178T",4
"lib2","SARS-CoV-2","CTATCATATCGCATAT",3,64.17,8.72,-2.11,0.09,3,1.07,0,">1 nonsynonymous","N120R N157H",2
"lib2","SARS-CoV-2","CTATCATCCAAATGAA",2,40.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P161Y F167N",2
"lib2","SARS-CoV-2","CTATCATCCAACAGTA",3,14.41,6,-4.84,2,3,1.05,0,">1 nonsynonymous","P7T F44Y Y93R Y119S F160N",5
"lib2","SARS-CoV-2","CTATCATCGATTGGCG",13,272.87,10.45,-0.38,0.03,2.95,1.03,0,">1 nonsynonymous","Q84L N130K Y143H T201Y",4
"lib2","SARS-CoV-2","CTATCATGGGGAAACC",19,9.21,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","CTATCATTCACGATAA",8,209.24,10.89,0.05,0.05,2.95,1.07,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","CTATCATTTAACGGTA",3,39.94,10.68,-0.15,0.07,2.92,1.11,0,">1 nonsynonymous","S129E T148I",2
"lib2","SARS-CoV-2","CTATCCAAAATTACCC",21,4.7,NA,NA,NA,NA,NA,NA,"stop","I28L N40F T55H D90* D112L Y121M",6
"lib2","SARS-CoV-2","CTATCCAACATTAAAA",3,69.14,10.58,-0.26,0.06,2.86,1.15,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","CTATCCAACCTGTACC",12,5.61,NA,NA,NA,NA,NA,NA,"stop","D68* K87Y T201Y",3
"lib2","SARS-CoV-2","CTATCCAAGAATGCGA",5,67.28,10.19,-0.65,0.05,2.73,1,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","CTATCCAAGAGCAGTC",5,47.19,6.89,-3.95,0.22,1.5,1.16,0.01,">1 nonsynonymous","T15K T46F G86C T201R",4
"lib2","SARS-CoV-2","CTATCCAAGTAAACGT",2,18.91,10.95,0.11,0.45,2.39,1.2,0.08,"1 nonsynonymous","K114T",1
"lib2","SARS-CoV-2","CTATCCACAGACTCGG",6,58.29,10.11,-0.73,0.04,2.87,1.02,0,">1 nonsynonymous","S36I S41L",2
"lib2","SARS-CoV-2","CTATCCACATAACTGT",1,56.86,6.1,-4.74,0.68,1.5,1.16,0.01,">1 nonsynonymous","A89S N118R Y123N",3
"lib2","SARS-CoV-2","CTATCCACTACAACAC",3,52.48,10.81,-0.03,0.04,2.93,1.03,0,">1 nonsynonymous","G83M T140R",2
"lib2","SARS-CoV-2","CTATCCAGAATAGGCC",4,14.82,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41F N107C R124N",3
"lib2","SARS-CoV-2","CTATCCCACAAAAAAA",1,5.75,6,-4.84,2,3,1.03,0,">1 nonsynonymous","C6R V11R Y66N D90H V115G P197S",6
"lib2","SARS-CoV-2","CTATCCCACATTGAAT",10,47.16,9.62,-1.22,0.09,1.91,1.05,0,">1 nonsynonymous","F99I K132L",2
"lib2","SARS-CoV-2","CTATCCCAGAAATGGA",4,28.94,6,-4.84,0.92,2.52,1.17,0.01,">1 nonsynonymous","C49T L57N L122I",3
"lib2","SARS-CoV-2","CTATCCCATATAAATA",2,1.22,NA,NA,NA,NA,NA,NA,"stop","R25V V37* G116Y",3
"lib2","SARS-CoV-2","CTATCCCATGTCACAA",1,7.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2S C61D F70R S129I Q144T",5
"lib2","SARS-CoV-2","CTATCCCCTCCAAAGT",1,11.78,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","N4C E10N L38I S41E F99S N171S",6
"lib2","SARS-CoV-2","CTATCCCGAAAATAAA",1,22.25,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","C6S K114M Y119R G155P S164Y",5
"lib2","SARS-CoV-2","CTATCCCGTTATAGTG",6,22.45,7.97,-2.87,0.33,1.5,1.19,0.05,">1 nonsynonymous","E135W G152I",2
"lib2","SARS-CoV-2","CTATCCCTTGTACGAA",10,178,9.69,-1.15,0.03,2.87,1.1,0,">1 nonsynonymous","F44L Y119R",2
"lib2","SARS-CoV-2","CTATCCGAACTTTATA",3,3.26,NA,NA,NA,NA,NA,NA,"stop","N110* N118L R179V",3
"lib2","SARS-CoV-2","CTATCCGAGTTCAAGT",7,42.77,6.01,-4.83,1.34,1.5,1.25,0.04,">1 nonsynonymous","A89Y W106V Y178F",3
"lib2","SARS-CoV-2","CTATCCGCCCCACCGA",7,0.2,NA,NA,NA,NA,NA,NA,"stop","A18M C49F A81* Y93P D97S C158R",6
"lib2","SARS-CoV-2","CTATCCGTAATACCAT",6,1.11,NA,NA,NA,NA,NA,NA,"stop","A42W S129Y E141*",3
"lib2","SARS-CoV-2","CTATCCTAAATTTCTT",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29V S36H G74Q P149T G196L K199V",6
"lib2","SARS-CoV-2","CTATCCTAGCTATGTA",6,33.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N40C N92Y F99R",3
"lib2","SARS-CoV-2","CTATCCTCCACACACA",8,0.27,NA,NA,NA,NA,NA,NA,"stop","F47* G83K",2
"lib2","SARS-CoV-2","CTATCCTCGGACTGTA",2,19.76,10.25,-0.58,0.07,2.89,1.07,0,">1 nonsynonymous","Y35L G51T N130Y",3
"lib2","SARS-CoV-2","CTATCGAACAACGGGA",6,2.79,NA,NA,NA,NA,NA,NA,"stop","R27C P96*",2
"lib2","SARS-CoV-2","CTATCGACGATGATAA",6,54.59,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y93E Q144H P149Y N157H",4
"lib2","SARS-CoV-2","CTATCGATAACTCATC",1,31.61,10.74,-0.1,0.06,2.97,1.04,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","CTATCGATAGTTAGTA",8,179.89,10.28,-0.55,0.04,2.79,1.02,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","CTATCGCAAGCAAATG",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89W G116A",2
"lib2","SARS-CoV-2","CTATCGCCAGGTCGAC",4,135.55,10.33,-0.51,0.04,2.94,1.06,0,">1 nonsynonymous","A33P G155A",2
"lib2","SARS-CoV-2","CTATCGCTACTTAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36E P54I E135S",3
"lib2","SARS-CoV-2","CTATCTAATTTATTAA",12,2.35,NA,NA,NA,NA,NA,NA,"stop","W23* S45V P96R G101N",4
"lib2","SARS-CoV-2","CTATCTAGAAAAATTA",2,26.62,10.35,-0.49,0.1,2.72,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTATCTAGGAATGCAA",14,193.13,10.88,0.05,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATCTATAACTCACG",4,78.54,9.78,-1.06,0.03,2.81,1.08,0,">1 nonsynonymous","C61R V173P",2
"lib2","SARS-CoV-2","CTATCTATAATAACGG",8,74.75,9.85,-0.99,0.07,2.18,1.01,0,">1 nonsynonymous","N1C P133W",2
"lib2","SARS-CoV-2","CTATCTATATAACATG",8,74.84,9.91,-0.93,0.1,2.17,1.05,0,">1 nonsynonymous","W106L T148Q",2
"lib2","SARS-CoV-2","CTATCTATTCCACATA",4,22.03,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L122S S147T N157Y G174I",4
"lib2","SARS-CoV-2","CTATCTCACATTGAAA",11,55.26,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y91G G146Y",2
"lib2","SARS-CoV-2","CTATCTCTCCTCCGAA",5,20.93,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F99T S113L",2
"lib2","SARS-CoV-2","CTATCTGACGCCACCA",2,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L Y121R G152N",3
"lib2","SARS-CoV-2","CTATCTGACTCTCTGA",1,5.44,10.84,0,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATCTGAGTCGAGCA",7,71.21,8.29,-2.55,0.26,1.5,1.02,0.03,">1 nonsynonymous","T46C C61S K87M E135I",4
"lib2","SARS-CoV-2","CTATCTGCTTTGCAGG",1,26.85,10.9,0.06,0.04,2.98,1.03,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","CTATCTTAAAAAATAA",2,31.38,10.97,0.13,0.08,3,1.01,0,"1 nonsynonymous","R16T",1
"lib2","SARS-CoV-2","CTATCTTAAAAAGGAT",1,11.83,10.76,-0.08,0.09,2.86,1.16,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","CTATCTTACGTGAGGA",10,152.91,9.63,-1.2,0.04,2.94,1.07,0,">1 nonsynonymous","F126W P149K",2
"lib2","SARS-CoV-2","CTATGAAACAAAGTCC",4,79.29,10.5,-0.33,0.05,2.93,1.08,0,">1 nonsynonymous","K26T G83Y R136K N151D",4
"lib2","SARS-CoV-2","CTATGAAACCTTGAGG",5,82.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5F K26Q S36L I72F",4
"lib2","SARS-CoV-2","CTATGAAACGAATGTT",15,119.51,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N40F A81I K114S F167C V173I",5
"lib2","SARS-CoV-2","CTATGAAAGAATAGGG",5,50.5,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6M C31R L122V N157W Y178V",5
"lib2","SARS-CoV-2","CTATGAAAGACTACAA",6,83.8,8.93,-1.9,0.14,1.62,1.08,0.01,">1 nonsynonymous","I2N N110L E135Y G152L",4
"lib2","SARS-CoV-2","CTATGAACTTATGACC",5,61.39,10.59,-0.25,0.05,2.94,1.09,0,">1 nonsynonymous","C61D L187S",2
"lib2","SARS-CoV-2","CTATGAAGTAAATCGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F G9Q V77L P82K F160G",5
"lib2","SARS-CoV-2","CTATGAAGTAGGTCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","D90Y Q176R S200*",3
"lib2","SARS-CoV-2","CTATGAAGTTACCTAT",8,70.98,10.24,-0.59,0.06,2.81,1,0,">1 nonsynonymous","V52H C61I",2
"lib2","SARS-CoV-2","CTATGAATACATTGAG",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42E W106Y",2
"lib2","SARS-CoV-2","CTATGAATCTGCAAGT",3,2.46,NA,NA,NA,NA,NA,NA,"stop","T85S K114*",2
"lib2","SARS-CoV-2","CTATGAATGCCGCGCA",9,10.13,NA,NA,NA,NA,NA,NA,"stop","A18T R27* S41D L57S L122S S129V Y175W",7
"lib2","SARS-CoV-2","CTATGAATTGCTTTTA",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R Y121S E186V",3
"lib2","SARS-CoV-2","CTATGACAGCTGAAAC",7,90.06,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G146R F160T F167N",3
"lib2","SARS-CoV-2","CTATGACAGGCCCAAA",7,20.36,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","T85S L95N N110M R136L",4
"lib2","SARS-CoV-2","CTATGACATGATTCAC",4,24.53,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P96T G101S T148R",3
"lib2","SARS-CoV-2","CTATGACCCCCAAACA",1,14.28,7.4,-3.43,0.28,1.5,1,0.02,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","CTATGACCCGCAAGCG",1,41.36,10.83,-0.01,0.09,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATGACCCTTACAAA",1,32.45,10.88,0.05,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATGACGACTCTATT",3,65.13,10.46,-0.37,0.03,3,1,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","CTATGACGGATCATTA",9,23.75,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F8G A33I A81S D90Y T100H V115W",6
"lib2","SARS-CoV-2","CTATGACTTAATGAGA",2,70.38,8.57,-2.27,0.09,2.68,1.06,0,">1 nonsynonymous","T55G Y143C",2
"lib2","SARS-CoV-2","CTATGACTTTTGATAA",6,73.31,8.07,-2.77,0.21,2.11,1.07,0.02,">1 nonsynonymous","N107Q A145K K198L",3
"lib2","SARS-CoV-2","CTATGAGAATAATAAT",1,35.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7S N40F T46K P133C P149R E154F Q168L T201S",8
"lib2","SARS-CoV-2","CTATGAGCATTTCATG",1,14.04,10.47,-0.37,0.11,2.83,1.02,0,">1 nonsynonymous","R27H T85P T201P",3
"lib2","SARS-CoV-2","CTATGAGTTGTTACTA",6,111.61,10.2,-0.63,0.09,2.7,1.16,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","CTATGATCGACTGAAT",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M I28L C49D T63A P96A I104E G174I A192T",8
"lib2","SARS-CoV-2","CTATGATTCAATATCG",3,20.32,6.07,-4.77,1.2,1.5,1.15,0.03,">1 nonsynonymous","D68M S129F Y143D G172L",4
"lib2","SARS-CoV-2","CTATGATTCTATGCTG",1,22.83,8.55,-2.29,0.1,3,1.07,0,">1 nonsynonymous","N30G L60V N157S",3
"lib2","SARS-CoV-2","CTATGATTTTTTGAGC",2,7.57,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14V I104S",2
"lib2","SARS-CoV-2","CTATGCAAAAACGACC",1,12.91,10.73,-0.1,0.06,2.96,1.05,0,"1 nonsynonymous","G196R",1
"lib2","SARS-CoV-2","CTATGCAAAGTAACAT",6,42,10.35,-0.49,0.06,2.91,1.09,0,">1 nonsynonymous","L5S K128V I138S",3
"lib2","SARS-CoV-2","CTATGCAAATACGCAG",12,1.9,NA,NA,NA,NA,NA,NA,"stop","N13L N157* L162Q",3
"lib2","SARS-CoV-2","CTATGCAACTCGTCAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93M F126N",2
"lib2","SARS-CoV-2","CTATGCACATACAAGG",1,57.07,10.55,-0.29,0.05,2.87,1.1,0,"1 nonsynonymous","G116H",1
"lib2","SARS-CoV-2","CTATGCACGACATGGT",6,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S P133L",2
"lib2","SARS-CoV-2","CTATGCACGGTTGCCA",4,20.37,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N92L G152S T201K",3
"lib2","SARS-CoV-2","CTATGCACTAGAAACA",1,6.18,11.07,0.23,0.16,2.75,1.02,0.01,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","CTATGCACTTGCAGTT",10,2.8,NA,NA,NA,NA,NA,NA,"stop","Y123* S129D",2
"lib2","SARS-CoV-2","CTATGCAGGATGAAAT",2,23.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29V S69L A105L",3
"lib2","SARS-CoV-2","CTATGCATAGAGCCGT",1,19.73,10.49,-0.34,0.05,2.95,1.02,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","CTATGCATTATATGAT",5,40.43,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","A67L F99P",2
"lib2","SARS-CoV-2","CTATGCCACCCAAATG",3,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R E76I T170I",3
"lib2","SARS-CoV-2","CTATGCCTACAATCAT",1,42.57,10.5,-0.34,0.05,2.9,1.03,0,">1 nonsynonymous","T85V E141L T201L",3
"lib2","SARS-CoV-2","CTATGCGAAAAATCGT",2,1.91,NA,NA,NA,NA,NA,NA,"stop","N4G R16L I28K N58V G174*",5
"lib2","SARS-CoV-2","CTATGCGCCGAAAGCC",20,86.2,6,-4.84,2,1.5,1.35,0.02,">1 nonsynonymous","F8N S19G C61W W106E",4
"lib2","SARS-CoV-2","CTATGCGCTGGTCTCG",2,0,NA,NA,NA,NA,NA,NA,"stop","N58L F167Y T201*",3
"lib2","SARS-CoV-2","CTATGCTAAGAAACAA",3,41.81,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C61Y D112N",2
"lib2","SARS-CoV-2","CTATGCTAGAGAGCGA",2,51.18,7.91,-2.92,0.32,1.5,1.05,0.03,">1 nonsynonymous","F44I G51Q F134Q Q168I T201A",5
"lib2","SARS-CoV-2","CTATGCTCCAGAGAAA",13,211.57,8.59,-2.25,0.1,3,1.03,0,">1 nonsynonymous","Y39R Y159Q",2
"lib2","SARS-CoV-2","CTATGCTCGGATAGTG",18,0.99,NA,NA,NA,NA,NA,NA,"stop","S41* Y159E V173Y",3
"lib2","SARS-CoV-2","CTATGCTTAATTAATT",1,24.16,10.09,-0.75,0.05,2.9,1.12,0,">1 nonsynonymous","A33L G166A",2
"lib2","SARS-CoV-2","CTATGCTTCTTGCCCA",4,30.68,10.75,-0.09,0.06,2.92,1.06,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","CTATGCTTCTTGCGGA",14,3.28,NA,NA,NA,NA,NA,NA,"stop","P54E G83* Q144L",3
"lib2","SARS-CoV-2","CTATGCTTTATTTACC",3,42.59,9.44,-1.39,0.07,1.9,1.06,0,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","CTATGGAAAATAATGC",1,0,NA,NA,NA,NA,NA,NA,"stop","F17T F44S Q144I T201*",4
"lib2","SARS-CoV-2","CTATGGAAACGTTAAA",5,39.09,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V37L F99L N107V",3
"lib2","SARS-CoV-2","CTATGGAAATTGCATA",6,121.33,10.84,0,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATGGACAAATATAT",2,10.43,9.81,-1.03,0.22,2.36,1.2,0.01,">1 nonsynonymous","S36T T55N W106R",3
"lib2","SARS-CoV-2","CTATGGAGATCCTGGG",1,10.91,6.09,-4.75,2,1.5,1.14,0.05,">1 nonsynonymous","Y66P A105M L122W",3
"lib2","SARS-CoV-2","CTATGGATATCAAGAG",12,2.19,NA,NA,NA,NA,NA,NA,"stop","L122* T148R A192S S200Q",4
"lib2","SARS-CoV-2","CTATGGATGTCTGCCA",8,75.7,10.88,0.04,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATGGCGGTGGATGG",15,14.72,NA,NA,NA,NA,NA,NA,"stop","V37R F44T S53C D90* F99L",5
"lib2","SARS-CoV-2","CTATGGGAGATAGTTC",2,9.66,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C49T D98T Q176R",3
"lib2","SARS-CoV-2","CTATGGTAACTATCCA",2,19.66,10.66,-0.17,0.06,2.91,1.09,0,"1 nonsynonymous","T148C",1
"lib2","SARS-CoV-2","CTATGGTTACTTACCA",2,0.5,NA,NA,NA,NA,NA,NA,"stop","S41P C61T A89G S129P I142* A190H",6
"lib2","SARS-CoV-2","CTATGTAAAGTTATGT",4,38.87,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","S43L K87T V103R",3
"lib2","SARS-CoV-2","CTATGTACAAACCTAT",8,108.1,6,-4.84,0.76,1.5,1.14,0,">1 nonsynonymous","S36I D59K R73K K94L",4
"lib2","SARS-CoV-2","CTATGTACTAACTAGA",2,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F C49Y",2
"lib2","SARS-CoV-2","CTATGTACTGTAAGAT",5,0.2,NA,NA,NA,NA,NA,NA,"stop","D59Q S69N F99* E135V T201Y",5
"lib2","SARS-CoV-2","CTATGTAGAACATACG",2,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H A42L N58C S108V Y119A R179E",6
"lib2","SARS-CoV-2","CTATGTATGAATTCTA",8,60.21,9.21,-1.63,0.13,2.16,1.11,0.01,">1 nonsynonymous","C6Y D98C",2
"lib2","SARS-CoV-2","CTATGTATTCGAAGCG",1,31.91,10.85,0.01,0.06,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATGTATTTAAAAAG",3,57.36,10.9,0.07,0.06,2.87,1.12,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","CTATGTCTCCCCAGTA",2,32.23,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","F44N I138K Q176S",3
"lib2","SARS-CoV-2","CTATGTCTGACCCATC",8,0,NA,NA,NA,NA,NA,NA,"stop","N120* L125H P177Q S200L",4
"lib2","SARS-CoV-2","CTATGTGCTTATTTGT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18C A42L G166S",3
"lib2","SARS-CoV-2","CTATGTGTCAATGGAG",6,157.28,9.72,-1.12,0.06,2.67,1.07,0,">1 nonsynonymous","D75V E141R",2
"lib2","SARS-CoV-2","CTATGTTAAAACTTGT",1,15.29,10.55,-0.29,0.07,2.99,1,0,">1 nonsynonymous","T46S D90K",2
"lib2","SARS-CoV-2","CTATGTTAGATGGATA",4,36.03,6,-4.84,2,3,1.37,0.01,">1 nonsynonymous","Y39L G101F",2
"lib2","SARS-CoV-2","CTATGTTCCCATCAAG",14,172.62,10.91,0.07,0.05,2.9,1.07,0,">1 nonsynonymous","T55S T201L",2
"lib2","SARS-CoV-2","CTATGTTTAATAGTAA",5,63.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36R Y159G",2
"lib2","SARS-CoV-2","CTATGTTTTAGCGGAC",4,89.03,9.55,-1.29,0.04,2.89,1.12,0,">1 nonsynonymous","C61S L125P S129D",3
"lib2","SARS-CoV-2","CTATTAAACAAGCGGT",1,2.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144N",1
"lib2","SARS-CoV-2","CTATTAAACATCGCAT",1,9.47,9.47,-1.37,0.16,3,1.02,0.01,">1 nonsynonymous","A145F T201V",2
"lib2","SARS-CoV-2","CTATTAAACATGTGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V32L",1
"lib2","SARS-CoV-2","CTATTAAACCACTCGT",6,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W Q84T W106A",3
"lib2","SARS-CoV-2","CTATTAAATAGTAGGA",7,0.05,NA,NA,NA,NA,NA,NA,"stop","N40* A81H G83C Y159M",4
"lib2","SARS-CoV-2","CTATTAACAACCTTGG",1,7.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I F167V P197G",3
"lib2","SARS-CoV-2","CTATTAAGAAAAATGT",1,20.44,10.78,-0.06,0.08,2.8,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTAAGCTATGAAC",5,95.27,10.63,-0.21,0.03,2.92,1.05,0,">1 nonsynonymous","V65F T201D",2
"lib2","SARS-CoV-2","CTATTAATAAGAAACT",2,32.14,9.68,-1.16,0.09,2.81,1,0,">1 nonsynonymous","G116S Q168S E186Y",3
"lib2","SARS-CoV-2","CTATTAATAGCATCCT",3,81.19,10.79,-0.04,0.06,2.93,1.08,0,">1 nonsynonymous","L60G Q84M",2
"lib2","SARS-CoV-2","CTATTAATCGCTGGGT",3,41.87,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T46R V52S A105V I142S",4
"lib2","SARS-CoV-2","CTATTAATCTAAGGAC",4,27.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9K V20N P96F A105F",4
"lib2","SARS-CoV-2","CTATTAATGTAACACC",2,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G V182R",2
"lib2","SARS-CoV-2","CTATTAATTTAGCACG",15,61.1,8.88,-1.95,0.18,1.74,1.23,0.01,">1 nonsynonymous","F8V N13C D97A K114R",4
"lib2","SARS-CoV-2","CTATTAATTTGGTATC",2,23.77,6,-4.84,2,3,1.26,0,">1 nonsynonymous","V37L R73Y V103I F134I L162K G174W",6
"lib2","SARS-CoV-2","CTATTACACATTCATC",7,284.96,8.13,-2.71,0.09,1.84,1.11,0,">1 nonsynonymous","L5Q P54T Y119A P177S",4
"lib2","SARS-CoV-2","CTATTACAGTATACCT",2,15.3,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","N4A N58V N157F F167T V180F",5
"lib2","SARS-CoV-2","CTATTACCACGCATAA",3,30.66,6,-4.84,1.26,1.5,1.13,0.01,">1 nonsynonymous","Y35S L125R A145K",3
"lib2","SARS-CoV-2","CTATTACCAGAACGCT",4,41.89,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6V Y123T S139K",3
"lib2","SARS-CoV-2","CTATTACCATTGCAAA",3,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P V103S",2
"lib2","SARS-CoV-2","CTATTACCGGTCCGCC",8,88.29,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14E R179Y",2
"lib2","SARS-CoV-2","CTATTACCGTAGATCC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93E",1
"lib2","SARS-CoV-2","CTATTACCTAACCGAG",5,53.9,10.85,0.01,0.07,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTACCTCCAGGTT",13,1.12,NA,NA,NA,NA,NA,NA,"stop","L57* K87W W106K F160D",4
"lib2","SARS-CoV-2","CTATTACGAAACCAAT",5,146.17,9.52,-1.31,0.08,1.95,1.05,0,">1 nonsynonymous","F8S K56T",2
"lib2","SARS-CoV-2","CTATTACGACAGTCTG",5,52.88,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F8I T55L I80E K128S",4
"lib2","SARS-CoV-2","CTATTACGATGTCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A S139W",2
"lib2","SARS-CoV-2","CTATTACGTAAAACAT",5,0.82,NA,NA,NA,NA,NA,NA,"stop","F12K R78* N92T S200*",4
"lib2","SARS-CoV-2","CTATTACGTGACATAT",9,57.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6E R25A T63R G155N T170F T201I",6
"lib2","SARS-CoV-2","CTATTACTATACACAA",2,26.09,6,-4.83,0.62,1.5,1.07,0.01,">1 nonsynonymous","I2A N92T",2
"lib2","SARS-CoV-2","CTATTACTGTTGCGCG",3,137.48,9.44,-1.39,0.09,2.23,1.08,0,">1 nonsynonymous","F44H Q144L",2
"lib2","SARS-CoV-2","CTATTACTTGAGATAC",8,126.09,10.78,-0.05,0.04,2.94,1.07,0,">1 nonsynonymous","R27E A190P",2
"lib2","SARS-CoV-2","CTATTAGAAATATTAT",8,69.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T100P A105F",2
"lib2","SARS-CoV-2","CTATTAGACGCATATA",4,3.79,NA,NA,NA,NA,NA,NA,"stop","G9L A22E S41L W106V K114E L122* L162M",7
"lib2","SARS-CoV-2","CTATTAGAGGAGGCTG",2,28.34,9.61,-1.23,0.07,2.12,1.05,0,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","CTATTAGCATTATAGG",1,33.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4D S19T Y175V",3
"lib2","SARS-CoV-2","CTATTAGCCGAGATAA",1,60.25,9.5,-1.34,0.06,1.76,1.03,0,">1 nonsynonymous","F44Q V173S",2
"lib2","SARS-CoV-2","CTATTAGCTAAGTCCA",6,105.7,10.49,-0.35,0.05,2.94,1.05,0,">1 nonsynonymous","T15M I138T",2
"lib2","SARS-CoV-2","CTATTAGGATCCTGAT",14,81.98,10.83,0,0.04,2.98,1.05,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","CTATTAGTGATGACTG",11,62.24,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P54V I80S P149Y",3
"lib2","SARS-CoV-2","CTATTATACAGAATGC",2,16.91,10.12,-0.72,0.12,2.63,1.17,0.01,"1 nonsynonymous","T15C",1
"lib2","SARS-CoV-2","CTATTATATTTATCAA",2,6.11,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","A18H A105E",2
"lib2","SARS-CoV-2","CTATTATCCATTAACT",5,150.07,10.77,-0.06,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTATCCGCGCGCA",1,23.17,10.85,0.01,0.06,3,1.03,0,"1 nonsynonymous","K114Q",1
"lib2","SARS-CoV-2","CTATTATCCTTCCATA",7,17.73,6,-4.84,2,3,1.3,0.02,">1 nonsynonymous","F70D L95R L188M",3
"lib2","SARS-CoV-2","CTATTATCGTCATGTC",3,25,8.17,-2.67,0.19,1.5,1.1,0.03,">1 nonsynonymous","F8M F17R",2
"lib2","SARS-CoV-2","CTATTATGAAAACTAT",4,98.24,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K56L L95M V115M S139L G155L P177F K199N",7
"lib2","SARS-CoV-2","CTATTATGCACGTACC",2,27.09,10.71,-0.13,0.07,2.73,1.28,0,">1 nonsynonymous","T3G E141K E154K",3
"lib2","SARS-CoV-2","CTATTATTACTGAAAT",15,6.95,NA,NA,NA,NA,NA,NA,"stop","L57W A89* N120L C158N",4
"lib2","SARS-CoV-2","CTATTATTATTGATAA",21,164.85,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F134E F156G Y165T",3
"lib2","SARS-CoV-2","CTATTATTCATTCTAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R D112R P133L",3
"lib2","SARS-CoV-2","CTATTATTGTATCCCG",2,41.98,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","P133S P149S C158W P169R",4
"lib2","SARS-CoV-2","CTATTCAAATAATGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y93V Q144*",2
"lib2","SARS-CoV-2","CTATTCACTGGGAGAG",7,22.99,8.35,-2.49,0.41,1.5,1.07,0.08,">1 nonsynonymous","Y21K K26L Q168F",3
"lib2","SARS-CoV-2","CTATTCAGCAAGAATT",6,46.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F62I P82L F99V",3
"lib2","SARS-CoV-2","CTATTCAGCAGAGAGA",4,44.18,8.42,-2.42,0.1,2.88,1.02,0,">1 nonsynonymous","E10N Y119M T170S",3
"lib2","SARS-CoV-2","CTATTCATAGATATAA",1,83.43,9.25,-1.59,0.08,1.81,1.1,0,">1 nonsynonymous","F12H T201V",2
"lib2","SARS-CoV-2","CTATTCATAGGCATCA",8,89.77,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F17R Y39L C61P S69Q Y143M",5
"lib2","SARS-CoV-2","CTATTCATCCGTCTTC",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35* F62T L122M F156T",4
"lib2","SARS-CoV-2","CTATTCATTTCGAGAG",4,0.89,NA,NA,NA,NA,NA,NA,"stop","N58H I138* G152L",3
"lib2","SARS-CoV-2","CTATTCCACAAACCGC",15,8.78,NA,NA,NA,NA,NA,NA,"stop","D34*",1
"lib2","SARS-CoV-2","CTATTCCAGGGCCCCT",7,0.11,NA,NA,NA,NA,NA,NA,"stop","C6V N30* K48N N92G G117F",5
"lib2","SARS-CoV-2","CTATTCCCAGACCGAC",7,67.91,10.7,-0.13,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTCCGAAATGAAG",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y T201R",2
"lib2","SARS-CoV-2","CTATTCCGAAATTTCC",15,225.02,9.35,-1.49,0.07,1.8,1.08,0,">1 nonsynonymous","V11D D90A",2
"lib2","SARS-CoV-2","CTATTCGAACCGACAC",10,0.54,NA,NA,NA,NA,NA,NA,"stop","P96S S113* G146A",3
"lib2","SARS-CoV-2","CTATTCGAGTGTTATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L D90S Y175E V181M",4
"lib2","SARS-CoV-2","CTATTCGCGACTCTAC",4,85.98,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P96A C150M P177T",3
"lib2","SARS-CoV-2","CTATTCGGAAAGAAAG",4,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S P149K P177L A192T P197T",5
"lib2","SARS-CoV-2","CTATTCGGTTTTCACG",9,221.71,10.81,-0.02,0.03,2.96,1.05,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","CTATTCGTTAGGAGTT",6,74.91,6.63,-4.21,0.27,1.5,1.15,0.01,">1 nonsynonymous","S43T Q84V G117M Y165I",4
"lib2","SARS-CoV-2","CTATTCTAACAGATAA",6,66.86,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S36V F134P",2
"lib2","SARS-CoV-2","CTATTCTAGGGTTCCG",1,24.9,10.15,-0.69,0.07,2.99,1.01,0,">1 nonsynonymous","L5T T63A E154L V173L A190V",5
"lib2","SARS-CoV-2","CTATTCTCTAGAACTA",19,250.61,9.08,-1.75,0.05,2.89,1.06,0,">1 nonsynonymous","Y35T N64H Y119T",3
"lib2","SARS-CoV-2","CTATTCTGGGTATAAA",3,59.91,8.96,-1.87,0.06,2.91,1.07,0,">1 nonsynonymous","D98K G146E",2
"lib2","SARS-CoV-2","CTATTCTTAAATCACC",7,0.12,NA,NA,NA,NA,NA,NA,"stop","V37P I80M D98* L122V N130F",5
"lib2","SARS-CoV-2","CTATTGAATACAACGT",2,61.04,9.79,-1.05,0.07,2.25,1,0,">1 nonsynonymous","N4D T55E A105Q",3
"lib2","SARS-CoV-2","CTATTGACACATTTTA",3,1.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133C",1
"lib2","SARS-CoV-2","CTATTGACAGGTACAA",1,10.43,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V71M A81M Q168P",3
"lib2","SARS-CoV-2","CTATTGACATAATTGA",3,12.4,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A42H V65E D112V",3
"lib2","SARS-CoV-2","CTATTGACCATCGTTA",2,25.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y21K C49V G86D",3
"lib2","SARS-CoV-2","CTATTGATATACAATT",2,10.87,10.61,-0.23,0.08,2.9,1.11,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","CTATTGATATTCGGCG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","Y35K Y50R V115* G166S",4
"lib2","SARS-CoV-2","CTATTGATTGGAGGAA",8,148.59,10.69,-0.14,0.03,2.92,1.09,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","CTATTGCACCTGGTAA",4,44.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A42R R136T C158Y",3
"lib2","SARS-CoV-2","CTATTGCAGAGGCATG",10,380.77,8.27,-2.57,0.1,2.69,1.05,0,">1 nonsynonymous","R27K Q176D",2
"lib2","SARS-CoV-2","CTATTGCATAAAATCT",6,77.98,8.49,-2.35,0.14,2.67,1.07,0.01,">1 nonsynonymous","S113L T201A",2
"lib2","SARS-CoV-2","CTATTGCGTAATGGAA",1,20.22,10.74,-0.1,0.09,3,1.01,0,">1 nonsynonymous","L122V P149H",2
"lib2","SARS-CoV-2","CTATTGCTGAAGTGAT",6,30.29,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F17L N64Y I138G C150P E154W",5
"lib2","SARS-CoV-2","CTATTGCTTATATGCG",11,29.25,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D59R S113M E135V",3
"lib2","SARS-CoV-2","CTATTGGAGGTTAAGA",13,221.01,8.28,-2.56,0.11,2.08,1.07,0,">1 nonsynonymous","P54K N107F N130K",3
"lib2","SARS-CoV-2","CTATTGGGCAAAACAA",5,126.92,10.61,-0.23,0.05,2.95,1.04,0,"1 nonsynonymous","S45G",1
"lib2","SARS-CoV-2","CTATTGTACCTTATAC",3,44.73,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F62R F70G T201A",3
"lib2","SARS-CoV-2","CTATTGTACTAACTAC",2,0.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","CTATTGTATAATATAA",6,83.25,9.68,-1.16,0.06,2.29,1.04,0,">1 nonsynonymous","S19P S45P I104Y",3
"lib2","SARS-CoV-2","CTATTGTGAAGTCGAC",16,24.85,6.51,-4.33,0.28,2.42,1.17,0.01,">1 nonsynonymous","T3R N13C R16A K56T E154F",5
"lib2","SARS-CoV-2","CTATTGTGCTTAAGAG",1,5.77,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","A22V V65K T85Q",3
"lib2","SARS-CoV-2","CTATTTAAAACCATTC",1,6.53,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","Y35V L125T D137C G155T",4
"lib2","SARS-CoV-2","CTATTTAAATGAAATG",7,48.91,7.96,-2.87,0.08,2.65,1.05,0,">1 nonsynonymous","F62Y N157C",2
"lib2","SARS-CoV-2","CTATTTAAGGTAACTG",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y G86V L131F",3
"lib2","SARS-CoV-2","CTATTTAAGTAGTCCG",10,106.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y165A N171G",2
"lib2","SARS-CoV-2","CTATTTAATTATTTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3G W106*",2
"lib2","SARS-CoV-2","CTATTTACGTAGTAGA",2,71.16,10.86,0.02,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTTATAAACCTGA",11,89.98,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9I G83P G146S F167Y",4
"lib2","SARS-CoV-2","CTATTTATACTTGTAG",1,15.65,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","R27M F47N L57R P177S",4
"lib2","SARS-CoV-2","CTATTTATCATATCTA",3,17.31,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","G9P S43T C49Y A105I K114M",5
"lib2","SARS-CoV-2","CTATTTATCCAATCTG",1,11.33,7.12,-3.72,0.68,1.5,1.16,0.04,">1 nonsynonymous","D59R S69Y I88H E135L S164A",5
"lib2","SARS-CoV-2","CTATTTATCCCTCTTC",1,58.16,9.94,-0.9,0.06,2.75,1.03,0,">1 nonsynonymous","N109M F134Q A192N",3
"lib2","SARS-CoV-2","CTATTTCAAATGTATT",13,82.18,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F99C L131C",2
"lib2","SARS-CoV-2","CTATTTCACAAATAGC",5,27.09,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T15N E76K N151A Y165P G174R",5
"lib2","SARS-CoV-2","CTATTTCATGCAAGTT",7,47.99,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35E F47P G166L",3
"lib2","SARS-CoV-2","CTATTTCGATAAGATT",2,2.95,NA,NA,NA,NA,NA,NA,"stop","K48* A89R P96F N107A",4
"lib2","SARS-CoV-2","CTATTTCGCTCTCAAA",2,41.98,6.86,-3.98,0.26,1.83,1.07,0.01,">1 nonsynonymous","I104L Y159E",2
"lib2","SARS-CoV-2","CTATTTCTACTTCCTA",3,10.1,10.72,-0.12,0.13,2.68,1.34,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTATTTCTAGTCTAAA",8,92.62,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C61V F99L T148E F167Q",4
"lib2","SARS-CoV-2","CTATTTCTCGTTATGT",1,21.79,9.26,-1.58,0.13,2.75,1.06,0.01,">1 nonsynonymous","V77T I88D L95Y T100R C158P K199G",6
"lib2","SARS-CoV-2","CTATTTGAAAGTAAGC",10,34.38,6.04,-4.8,1.42,1.5,1.23,0.04,">1 nonsynonymous","T3F C61M G86R",3
"lib2","SARS-CoV-2","CTATTTGACCTCAAAC",1,51.22,10.55,-0.29,0.06,2.92,1.04,0,">1 nonsynonymous","L60Q N130F S147T Q168S K199T",5
"lib2","SARS-CoV-2","CTATTTGATTAAACCC",2,6.53,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","P7V V32E Y50D L60S L95G L125P K132C Y165C",8
"lib2","SARS-CoV-2","CTATTTGCCAAAACTA",2,61.02,10.84,0,0.06,2.95,1.05,0,"1 nonsynonymous","K128A",1
"lib2","SARS-CoV-2","CTATTTGCTAAAGAGG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","C31T Y91G P96* E141D F160P",5
"lib2","SARS-CoV-2","CTATTTGCTAGCATAC",2,88.3,10.67,-0.17,0.03,2.98,1.02,0,"1 nonsynonymous","S184R",1
"lib2","SARS-CoV-2","CTATTTTACAAGTCGC",4,81.32,10.45,-0.39,0.04,2.88,1.05,0,">1 nonsynonymous","T15A N130A I142M A192E",4
"lib2","SARS-CoV-2","CTATTTTATGAAACAG",7,73.96,10.95,0.12,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTATTTTGCGAAAACG",4,0.69,NA,NA,NA,NA,NA,NA,"stop","Y35V S43R F70K N120* E141S C158N",6
"lib2","SARS-CoV-2","CTATTTTGTCCAAGTA",5,44.65,10.02,-0.82,0.04,2.52,1,0,">1 nonsynonymous","A42G F99L T140A",3
"lib2","SARS-CoV-2","CTATTTTTATAATCCC",3,9.36,10.46,-0.37,0.22,2.66,1.27,0.02,"1 nonsynonymous","F47T",1
"lib2","SARS-CoV-2","CTATTTTTCACGTCCC",9,82.59,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R25F K48N K87G",3
"lib2","SARS-CoV-2","CTATTTTTTTCCAGAT",3,33.15,8.98,-1.85,0.16,1.5,1,0.02,">1 nonsynonymous","V103C K114T",2
"lib2","SARS-CoV-2","CTCAAAAAAAACCGAT",2,38.68,10.56,-0.28,0.06,2.98,1,0,">1 nonsynonymous","I2E V52L Y91L",3
"lib2","SARS-CoV-2","CTCAAAAAAACCCAAT",7,112.05,8.35,-2.49,0.12,2.43,1.07,0.01,">1 nonsynonymous","K56V G83R S113F L122M",4
"lib2","SARS-CoV-2","CTCAAAAAAGAGACGT",7,33.27,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","W23F E154V R179Y",3
"lib2","SARS-CoV-2","CTCAAAAAATAATCAA",11,18.92,7.71,-3.13,0.44,1.5,1.03,0.05,">1 nonsynonymous","A14V V103Q",2
"lib2","SARS-CoV-2","CTCAAAAAATACAAAA",5,131.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S113L N157G",2
"lib2","SARS-CoV-2","CTCAAAAAATTGTGGC",7,111.82,6,-4.84,0.56,2.24,1.14,0,">1 nonsynonymous","Y91N S139V T170D",3
"lib2","SARS-CoV-2","CTCAAAAAGAAAAGAA",9,213.58,10.18,-0.66,0.03,2.93,1,0,">1 nonsynonymous","C6Y F160H",2
"lib2","SARS-CoV-2","CTCAAAAAGAGTGAAC",3,62.9,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R27E G83T L95I Y119I S164Y",5
"lib2","SARS-CoV-2","CTCAAAAATGCGCAGA",1,31.59,10.89,0.06,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAAAAATTCAAAAT",8,50.09,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","V180R",1
"lib2","SARS-CoV-2","CTCAAAACAACGAATT",3,71.04,10.41,-0.43,0.05,2.85,1.05,0,">1 nonsynonymous","V32E T100S",2
"lib2","SARS-CoV-2","CTCAAAACGGTCTAGA",2,67.11,10.84,0.01,0.06,2.98,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","CTCAAAACTTATACAG",4,18.69,6.04,-4.8,0.78,1.5,1.13,0.01,">1 nonsynonymous","S19P S43Y A67P L162E",4
"lib2","SARS-CoV-2","CTCAAAAGCATGTAAG",13,23.39,6,-4.84,2,3,1.2,0,">1 nonsynonymous","G83F I88M P96L S200R",4
"lib2","SARS-CoV-2","CTCAAAAGCGGGGTAT",3,24.44,10.82,-0.01,0.08,2.95,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAAAAGTAACACCC",1,78.69,10.82,-0.01,0.07,2.76,1.23,0,">1 nonsynonymous","N151K Q168F",2
"lib2","SARS-CoV-2","CTCAAAAGTGCTACCG",1,15.89,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L57T G83I",2
"lib2","SARS-CoV-2","CTCAAAATACTACTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* F99N N110I",3
"lib2","SARS-CoV-2","CTCAAAATGCTATACC",3,17.5,10.79,-0.04,0.09,2.97,1.06,0,"1 nonsynonymous","E10S",1
"lib2","SARS-CoV-2","CTCAAACAAAATGCCA",11,98.14,10.22,-0.62,0.03,2.88,1.06,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","CTCAAACAACCTCAAA",2,25.17,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","V20H",1
"lib2","SARS-CoV-2","CTCAAACAAGCAGCGG",7,1.22,NA,NA,NA,NA,NA,NA,"stop","F17P F70* D90M W106V S139P",5
"lib2","SARS-CoV-2","CTCAAACAATAATTAT",1,9.79,7.93,-2.91,0.24,2.34,1.11,0.01,">1 nonsynonymous","S53V S139H N157A",3
"lib2","SARS-CoV-2","CTCAAACACTTTCAAT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","F8* V65S T170A",3
"lib2","SARS-CoV-2","CTCAAACAGGGCTAAG",1,5.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37C K56S R127W S184N",4
"lib2","SARS-CoV-2","CTCAAACATCTGAAAC",4,64.25,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V37R Y50P K56P K87M G146W",5
"lib2","SARS-CoV-2","CTCAAACCACGGGGTC",5,23.42,7.68,-3.15,0.38,1.5,1.09,0.06,">1 nonsynonymous","A22R T55N V103P F126L E141L G166V Y178K T201F",8
"lib2","SARS-CoV-2","CTCAAACCGGGCAACT",4,24.24,6,-4.84,1.38,1.5,1.18,0.02,">1 nonsynonymous","V37T E76G D90E G117L P149T F167N",6
"lib2","SARS-CoV-2","CTCAAACGGTCCTTCA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77N P96C F156S",3
"lib2","SARS-CoV-2","CTCAAACTAAACAAAA",2,96.06,10.88,0.04,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAAACTGTTAAACA",1,33.2,9.31,-1.53,0.07,2.98,1.05,0,">1 nonsynonymous","E141D Q168I",2
"lib2","SARS-CoV-2","CTCAAAGACTTAGGAC",1,103.97,10.68,-0.15,0.03,2.97,1.03,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","CTCAAAGAGATATGCA",3,131.5,10.59,-0.24,0.04,2.9,1.1,0,">1 nonsynonymous","C61W T148K",2
"lib2","SARS-CoV-2","CTCAAAGCCCAACCCG",4,236.13,10.83,0,0.04,2.92,1.08,0,"1 nonsynonymous","L5V",1
"lib2","SARS-CoV-2","CTCAAAGGAAGCGGGC",5,119.07,10.79,-0.04,0.05,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAAAGGGTGCGACC",1,6.44,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","S43N K48I T100S C102F G152C",5
"lib2","SARS-CoV-2","CTCAAAGTCTATGACC",2,18.17,9.49,-1.35,0.12,1.78,1.06,0.01,">1 nonsynonymous","G9W G51F K128R",3
"lib2","SARS-CoV-2","CTCAAATAAAGCGAAA",7,83.22,10.31,-0.53,0.04,2.94,1.01,0,">1 nonsynonymous","P7L K26H",2
"lib2","SARS-CoV-2","CTCAAATAGAACATGG",1,6.77,10.98,0.14,0.08,3,1.02,0,">1 nonsynonymous","K56E Y66H T201M",3
"lib2","SARS-CoV-2","CTCAAATAGTTTTAAT",7,12.98,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","V52T A67C D97V N107I L183R",5
"lib2","SARS-CoV-2","CTCAAATATGGGCATT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* D59S",2
"lib2","SARS-CoV-2","CTCAAATTAAAGTGTT",6,57.56,8.57,-2.27,0.15,1.78,1.1,0.01,">1 nonsynonymous","D137T K198Q",2
"lib2","SARS-CoV-2","CTCAACAAACCTATGG",14,52.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2G C6V D112A K128V F167L",5
"lib2","SARS-CoV-2","CTCAACAAACTACGGA",4,89.53,10.73,-0.11,0.06,2.73,1.06,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","CTCAACAACTTCAGTG",2,6.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G A42S V153W G172W",4
"lib2","SARS-CoV-2","CTCAACAAGACAATAG",7,33.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10C S41G K48P",3
"lib2","SARS-CoV-2","CTCAACAATAAAAGAA",2,38.86,10.02,-0.82,0.13,2.56,1.06,0.01,">1 nonsynonymous","E10A F44C",2
"lib2","SARS-CoV-2","CTCAACAATCGTGCAT",1,53.35,8.21,-2.63,0.11,1.67,1.06,0,">1 nonsynonymous","I138C Q176R L187M A192W",4
"lib2","SARS-CoV-2","CTCAACAATTGGAAAT",2,42.19,10.28,-0.55,0.07,2.96,1.01,0,">1 nonsynonymous","Y39S S129Y E141N K198W",4
"lib2","SARS-CoV-2","CTCAACACAAAAGCTG",4,162.43,10.25,-0.58,0.04,2.89,1.01,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","CTCAACACACGTACCA",3,24.06,9.08,-1.75,0.09,2.88,1.16,0,"1 nonsynonymous","G166W",1
"lib2","SARS-CoV-2","CTCAACACATAGCAAA",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V C150R E154K Y159N",4
"lib2","SARS-CoV-2","CTCAACACCGTTTTAG",7,49.9,10.84,0.01,0.07,2.96,1.04,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","CTCAACACGATTTGTC",6,106.01,10.31,-0.53,0.03,2.94,1.07,0,"1 nonsynonymous","F47T",1
"lib2","SARS-CoV-2","CTCAACACGTTAACTG",6,51.12,10.26,-0.57,0.06,2.98,1.04,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","CTCAACACTCACTAAA",7,13.91,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6K C102D S129L",3
"lib2","SARS-CoV-2","CTCAACACTCCTACTA",1,6.1,8.26,-2.57,0.17,2.83,1,0.01,">1 nonsynonymous","A42S Y143N",2
"lib2","SARS-CoV-2","CTCAACAGAACAAGAG",17,202.7,9.35,-1.49,0.06,2.6,1.05,0,">1 nonsynonymous","D90L I104Y G155N",3
"lib2","SARS-CoV-2","CTCAACAGCAATACAG",5,4.31,NA,NA,NA,NA,NA,NA,"stop","A22V C61S D68E K114V P169* Y175G L183I",7
"lib2","SARS-CoV-2","CTCAACAGCGTTTGTG",11,261.98,8.89,-1.95,0.05,2.9,1.1,0,">1 nonsynonymous","N157T T201R",2
"lib2","SARS-CoV-2","CTCAACAGTAAAATCT",3,52.75,11.02,0.18,0.05,3,1.01,0,">1 nonsynonymous","L122Q N130C",2
"lib2","SARS-CoV-2","CTCAACATAGGTTTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","F17N R25F Y39I D98* S129L",5
"lib2","SARS-CoV-2","CTCAACATCCCCTAAA",4,53.54,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R27T W106L G155T P177Y",4
"lib2","SARS-CoV-2","CTCAACATGAGAAATA",5,157.74,8.65,-2.19,0.05,2.92,1.04,0,">1 nonsynonymous","T63N Y143E A192S",3
"lib2","SARS-CoV-2","CTCAACATGTTCAGTC",4,17.84,6,-4.84,2,3,1.07,0,">1 nonsynonymous","E10G C61P G86E T100D",4
"lib2","SARS-CoV-2","CTCAACCCATGGATAC",3,21.95,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","I2E F8L C102D S139T",4
"lib2","SARS-CoV-2","CTCAACCCCCCCGGCT",6,54.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K94N G116L P133D Y178F",4
"lib2","SARS-CoV-2","CTCAACCCTAATGTGT",4,21.07,10.6,-0.24,0.08,2.96,1.04,0,">1 nonsynonymous","A67L K132L",2
"lib2","SARS-CoV-2","CTCAACCTAGGGATTT",2,36.12,8.03,-2.81,0.21,1.5,1.04,0.01,">1 nonsynonymous","N40I N107E",2
"lib2","SARS-CoV-2","CTCAACCTTCAACTAA",7,122.66,9.22,-1.62,0.03,2.92,1.03,0,">1 nonsynonymous","K114T N120M T170R",3
"lib2","SARS-CoV-2","CTCAACGCACCTTTGT",1,10.91,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","Y21V G86V F126Q T201S",4
"lib2","SARS-CoV-2","CTCAACGCATTCCTAG",4,37.29,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C49G W106Y Q176R",3
"lib2","SARS-CoV-2","CTCAACGGACCATACT",3,30.7,6.81,-4.03,0.5,1.5,1.14,0.04,">1 nonsynonymous","C31R S41R K56T W106R S200N",5
"lib2","SARS-CoV-2","CTCAACTAAATGGCTT",9,111.66,10.52,-0.32,0.05,2.97,1.02,0,">1 nonsynonymous","T85K D98Y",2
"lib2","SARS-CoV-2","CTCAACTAACACAGAG",2,53.57,10.3,-0.54,0.05,2.68,1.12,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","CTCAACTACCTCTTCA",5,70.24,10.88,0.04,0.06,2.88,1.09,0,">1 nonsynonymous","N64S F160R",2
"lib2","SARS-CoV-2","CTCAACTACTCATAGT",8,97.79,9.22,-1.61,0.13,1.56,1.15,0.01,"1 nonsynonymous","I28D",1
"lib2","SARS-CoV-2","CTCAACTTACTCGCGA",8,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F T55I A81H Y159S",4
"lib2","SARS-CoV-2","CTCAACTTCAACCCGA",1,270.19,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y121N R127F F156L Y165H P197T",5
"lib2","SARS-CoV-2","CTCAACTTGCACCAAT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40P N118P",2
"lib2","SARS-CoV-2","CTCAAGAAAATAAGGC",3,9.96,6.26,-4.57,0.57,3,1.19,0.01,"1 nonsynonymous","P82Y",1
"lib2","SARS-CoV-2","CTCAAGAACAAAATCA",2,31.71,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","L38R A89P K94F E135P F167A",5
"lib2","SARS-CoV-2","CTCAAGAACTGTATCC",6,49.69,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R27V V37G G51F T85R N107L F160Y",6
"lib2","SARS-CoV-2","CTCAAGACACACGATG",7,171.08,10.78,-0.06,0.04,2.93,1.07,0,"1 nonsynonymous","T46V",1
"lib2","SARS-CoV-2","CTCAAGAGATGTCAGC",2,19.98,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N58L R124P",2
"lib2","SARS-CoV-2","CTCAAGAGGATATTCA",1,7.38,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","E10L R16L S41L T55N K94Q T170G",6
"lib2","SARS-CoV-2","CTCAAGATACTAGTCT",1,42.87,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D34W N58M C150L C158L G174M",5
"lib2","SARS-CoV-2","CTCAAGATAGTAAACT",1,79.37,8.74,-2.09,0.06,2.97,1.11,0,">1 nonsynonymous","P54L L125M Y159I",3
"lib2","SARS-CoV-2","CTCAAGATAGTATAGC",4,0.79,NA,NA,NA,NA,NA,NA,"stop","Y50* R136* I142Q",3
"lib2","SARS-CoV-2","CTCAAGATCCTGAAAT",6,65.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55R L95S T170K",3
"lib2","SARS-CoV-2","CTCAAGCCGCGGGCAC",1,25.39,10.55,-0.28,0.04,2.97,1,0,">1 nonsynonymous","D97I G152T",2
"lib2","SARS-CoV-2","CTCAAGCCTATATGAT",3,50.07,10.67,-0.17,0.06,2.91,1.11,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","CTCAAGCGCCGATAGA",2,49.1,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F8R G117D R127P",3
"lib2","SARS-CoV-2","CTCAAGCGCTATTATC",3,28.61,6.11,-4.73,0.51,3,1.2,0.01,">1 nonsynonymous","T85L D90G R127Q",3
"lib2","SARS-CoV-2","CTCAAGCTAAAAAAAC",18,154.31,8.25,-2.59,0.22,1.54,1.07,0.02,">1 nonsynonymous","I2Q P96T Y159L",3
"lib2","SARS-CoV-2","CTCAAGCTAATGGATG",3,24.35,8.59,-2.25,0.17,1.6,1.1,0.01,">1 nonsynonymous","F99Y K128V Q144G",3
"lib2","SARS-CoV-2","CTCAAGGCGTACGAGT",5,41.57,6,-4.84,0.97,1.5,1.04,0,">1 nonsynonymous","N109S Y143S",2
"lib2","SARS-CoV-2","CTCAAGGCTCATGTTG",6,100.11,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6V S19H G86C Y178M",4
"lib2","SARS-CoV-2","CTCAAGTATATCTAAG",1,15.28,10.25,-0.59,0.09,2.78,1.18,0,">1 nonsynonymous","G83S T148I",2
"lib2","SARS-CoV-2","CTCAAGTCTCTGCCTT",1,4.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","CTCAAGTCTGTTATAC",2,24.77,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V71P A89E T148M",3
"lib2","SARS-CoV-2","CTCAAGTGAACGAAAC",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K S45V T100D",3
"lib2","SARS-CoV-2","CTCAAGTGATTCGCAG",8,198.75,8.07,-2.77,0.18,1.5,1.07,0.01,">1 nonsynonymous","S29W F44M Y159L",3
"lib2","SARS-CoV-2","CTCAAGTTCACAAGAT",6,28.18,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C6M S19L R73D P82L D90R T100S E141T",7
"lib2","SARS-CoV-2","CTCAAGTTTAAACTGT",4,29.94,10.72,-0.12,0.07,2.92,1.1,0,">1 nonsynonymous","S41V N120H P149Q",3
"lib2","SARS-CoV-2","CTCAAGTTTTTAGTTA",2,50.5,10.59,-0.25,0.07,2.9,1.05,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","CTCAATAAAATACGAG",3,34.89,10.88,0.04,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATAAACAACAGC",13,5.54,NA,NA,NA,NA,NA,NA,"stop","G74L Q163*",2
"lib2","SARS-CoV-2","CTCAATAAATGTGATT",3,27.46,9.78,-1.05,0.08,2.39,1.06,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","CTCAATAACTTATAGG",4,1.22,NA,NA,NA,NA,NA,NA,"stop","S43Y E141T P149T V173*",4
"lib2","SARS-CoV-2","CTCAATAATCGCAAAC",17,150.71,10.86,0.02,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATACACTCCCAC",8,181.2,9.89,-0.95,0.08,2.23,1.05,0,"1 nonsynonymous","C102F",1
"lib2","SARS-CoV-2","CTCAATACATCCTGCT",8,155.21,10.58,-0.25,0.04,2.87,1.09,0,">1 nonsynonymous","P96T L122R",2
"lib2","SARS-CoV-2","CTCAATACCAAGTCGG",16,150.8,9.66,-1.18,0.04,1.91,1.08,0,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","CTCAATACCTATTTGT",9,49.84,10.79,-0.05,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATACGAATAAAC",1,86.27,9.73,-1.1,0.07,2.33,1.06,0,"1 nonsynonymous","L38T",1
"lib2","SARS-CoV-2","CTCAATACGCCCCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50L L131* Q163T",3
"lib2","SARS-CoV-2","CTCAATAGACGTTGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15R F44I V153C G174*",4
"lib2","SARS-CoV-2","CTCAATAGGTTCCTAG",1,11.41,10.48,-0.35,0.09,2.92,1,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","CTCAATAGTTAAGAGA",2,36.49,10.84,0.01,0.07,2.92,1.1,0,">1 nonsynonymous","Y39I F134L",2
"lib2","SARS-CoV-2","CTCAATATATGAGCAT",4,29.02,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S19F C61E Y143R",3
"lib2","SARS-CoV-2","CTCAATATTACAATGT",6,92.94,9.63,-1.2,0.03,2.93,1.07,0,">1 nonsynonymous","R73A N120L P197L",3
"lib2","SARS-CoV-2","CTCAATATTTATAAAA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","K56A D97F F99Y I142* V181S",5
"lib2","SARS-CoV-2","CTCAATCACCACTTCG",1,9.85,10.41,-0.43,0.08,2.95,1.08,0.01,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","CTCAATCACCTACAAG",5,2.49,NA,NA,NA,NA,NA,NA,"stop","C6I F47D Q163* Y175G",4
"lib2","SARS-CoV-2","CTCAATCCACTACTTA",2,11.13,6,-4.84,2,3,1.06,0,">1 nonsynonymous","P7T A18Y D68K P161V",4
"lib2","SARS-CoV-2","CTCAATCCCATACTGT",7,86.83,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N4I R16N A42H L57F R124A F134G V180P",7
"lib2","SARS-CoV-2","CTCAATCGCTTAAATT",9,81.89,6,-4.84,0.78,1.5,1.13,0,">1 nonsynonymous","D34L T148S G155S Y178D",4
"lib2","SARS-CoV-2","CTCAATCTAAAGTGCC",6,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H I88T Q176V S200R",4
"lib2","SARS-CoV-2","CTCAATCTTCTACTAT",13,1.09,NA,NA,NA,NA,NA,NA,"stop","C61I V153D S200* T201R",4
"lib2","SARS-CoV-2","CTCAATGATCAGATAT",5,22.68,9.37,-1.47,0.24,1.56,1.16,0.02,">1 nonsynonymous","S45G I104S Q163L A190F",4
"lib2","SARS-CoV-2","CTCAATGATCAGTTAT",2,43.42,10.25,-0.58,0.06,2.82,1.03,0,">1 nonsynonymous","T55A P161S",2
"lib2","SARS-CoV-2","CTCAATGCTCGGCATC",6,90.17,10.8,-0.04,0.04,2.96,1.07,0,">1 nonsynonymous","K128R T201H",2
"lib2","SARS-CoV-2","CTCAATGCTTGCACAT",3,31.18,10.89,0.06,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATGGCGATGATT",1,15.6,10.37,-0.47,0.1,2.85,1.02,0,">1 nonsynonymous","P54R E135V",2
"lib2","SARS-CoV-2","CTCAATGTATTCCCCC",2,21.5,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","G9T V32E Y50L Y123W",4
"lib2","SARS-CoV-2","CTCAATGTCAACTCAA",5,76.28,10.22,-0.61,0.02,3,1.01,0,">1 nonsynonymous","G116Y P169N",2
"lib2","SARS-CoV-2","CTCAATGTGCAATGGA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y F99S P133E",3
"lib2","SARS-CoV-2","CTCAATGTGCTCTCTT",4,25.65,6,-4.84,1.01,2.17,1.09,0,">1 nonsynonymous","I72F N107G",2
"lib2","SARS-CoV-2","CTCAATTAAAAACAGG",7,117.63,10.83,0,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATTACCCTACAT",1,55.03,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R25C S139F",2
"lib2","SARS-CoV-2","CTCAATTCACAGCACG",1,6.77,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","N40S N64S V77L V103E",4
"lib2","SARS-CoV-2","CTCAATTCACCGTAGG",5,83.4,10.48,-0.35,0.05,2.93,1.09,0,"1 nonsynonymous","K132P",1
"lib2","SARS-CoV-2","CTCAATTCACTAGCAA",14,164.39,10.66,-0.17,0.04,2.97,1.04,0,"1 nonsynonymous","T63C",1
"lib2","SARS-CoV-2","CTCAATTCCATTAACA",4,122.92,10.9,0.06,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAATTCGTCCTAAC",8,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G R27C L60A R78A",4
"lib2","SARS-CoV-2","CTCAATTGCGCTGCCA",9,194.29,10.77,-0.07,0.04,2.92,1.09,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","CTCAATTTTAAATACA",10,57.2,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S19T S43R T100P",3
"lib2","SARS-CoV-2","CTCAATTTTAATGTAT",7,41.96,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L5M T55V Q79S K114L Y143L F156S",6
"lib2","SARS-CoV-2","CTCACAAAAGAACACC",3,9.29,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L38T T55F Y121V R136W G152S",5
"lib2","SARS-CoV-2","CTCACAAAGATACTGA",3,22.14,6.38,-4.45,0.37,3,1.19,0.01,">1 nonsynonymous","E10P Y39S Q79K I88M",4
"lib2","SARS-CoV-2","CTCACAAATAGATCAG",2,36.53,10.71,-0.13,0.05,2.94,1.04,0,">1 nonsynonymous","S41G E141N",2
"lib2","SARS-CoV-2","CTCACAACCTGTCATG",3,1.66,NA,NA,NA,NA,NA,NA,"stop","L5C Y50* C61S K87M",4
"lib2","SARS-CoV-2","CTCACAACTGGATTTA",4,23.53,6.44,-4.39,0.55,1.5,1.15,0.03,">1 nonsynonymous","T55L N64H D98Q L162R",4
"lib2","SARS-CoV-2","CTCACAATCAATCAAT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","C31* T55I",2
"lib2","SARS-CoV-2","CTCACACAGACTTTGT",6,31.47,8.26,-2.57,0.35,1.75,1.09,0.05,">1 nonsynonymous","T3P D98L Y143Q",3
"lib2","SARS-CoV-2","CTCACACATATTAATT",5,8.43,10.65,-0.18,0.08,2.8,1.22,0,">1 nonsynonymous","L5W F160A",2
"lib2","SARS-CoV-2","CTCACACCACCAAGTC",8,233.83,9.09,-1.75,0.05,2.85,1.11,0,"1 nonsynonymous","T170C",1
"lib2","SARS-CoV-2","CTCACACTAACAAACG",2,23.66,6.26,-4.57,0.57,1.5,1.14,0.01,">1 nonsynonymous","S113G S139P V153I F167K",4
"lib2","SARS-CoV-2","CTCACACTACAGTCAA",2,55.86,10.33,-0.5,0.04,3,1.03,0,">1 nonsynonymous","L5M P169Y",2
"lib2","SARS-CoV-2","CTCACACTCACATCCT",1,6.37,10.53,-0.31,0.08,2.94,1.03,0,"1 nonsynonymous","P7Y",1
"lib2","SARS-CoV-2","CTCACAGACCCATACG",3,18.33,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","C6P I28N F99I F160C S200F",5
"lib2","SARS-CoV-2","CTCACAGACTGATATA",2,27.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1T D34V G146R L162T",4
"lib2","SARS-CoV-2","CTCACAGGACCCCATA",7,146.44,9.18,-1.66,0.04,2.87,1.11,0,">1 nonsynonymous","Y119W E141H",2
"lib2","SARS-CoV-2","CTCACAGGATTTGTCG",1,12.14,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F47D G83Y",2
"lib2","SARS-CoV-2","CTCACATGCTGTTAGC",1,10.72,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","CTCACCAAGTAGTTCG",4,50.4,9.27,-1.57,0.07,2.28,1.09,0,">1 nonsynonymous","C31M R78V G83C",3
"lib2","SARS-CoV-2","CTCACCAATAGGGCCA",3,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109P C150K C158L",3
"lib2","SARS-CoV-2","CTCACCAATATAAATT",3,33.83,10.76,-0.08,0.07,2.89,1.12,0,">1 nonsynonymous","I138N K198S",2
"lib2","SARS-CoV-2","CTCACCACACCAAAAC",4,22.9,7.78,-3.06,0.35,1.5,1.13,0.05,">1 nonsynonymous","P149H E154Y Y165F",3
"lib2","SARS-CoV-2","CTCACCACCATACCAC",2,0.47,NA,NA,NA,NA,NA,NA,"stop","S45C F47G C61* S113G Y178F",5
"lib2","SARS-CoV-2","CTCACCACGGCAATAA",6,54.57,6.53,-4.3,0.48,1.5,1.22,0.02,">1 nonsynonymous","F70K N171F",2
"lib2","SARS-CoV-2","CTCACCAGAAGTTACA",7,99.99,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N120M F167G",2
"lib2","SARS-CoV-2","CTCACCAGAGTGTATA",2,53.07,10.9,0.06,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCACCAGCACCTACA",5,157.22,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V11C V71E D112L C150G",4
"lib2","SARS-CoV-2","CTCACCAGGAATCAAC",14,6.56,NA,NA,NA,NA,NA,NA,"stop","A14S V77K G83* A105E G155S",5
"lib2","SARS-CoV-2","CTCACCATAACAGGAT",2,39.91,8.41,-2.43,0.2,1.72,1.1,0.01,">1 nonsynonymous","T3K Y165S",2
"lib2","SARS-CoV-2","CTCACCATGTTCACAA",18,0.9,NA,NA,NA,NA,NA,NA,"stop","S69G I88F C102* T170Y",4
"lib2","SARS-CoV-2","CTCACCATTAACTAAC",15,132.66,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","I72F L95T K128R I138L P197N",5
"lib2","SARS-CoV-2","CTCACCCCATTACTAA",2,24.4,9.29,-1.55,0.22,1.5,1,0.03,">1 nonsynonymous","K56Q W106L F185I",3
"lib2","SARS-CoV-2","CTCACCCTAACCGAAC",9,1.01,NA,NA,NA,NA,NA,NA,"stop","C6Y S45F N58R D112G F160G Y165*",6
"lib2","SARS-CoV-2","CTCACCCTACTGTCTA",2,50.41,10.64,-0.19,0.04,2.94,1.07,0,">1 nonsynonymous","P149F K198L",2
"lib2","SARS-CoV-2","CTCACCGCCGCCCTAC",6,1.07,NA,NA,NA,NA,NA,NA,"stop","F17N G83N K87* F134N",4
"lib2","SARS-CoV-2","CTCACCTAATTAAAGT",7,137.72,10.51,-0.33,0.03,2.96,1.02,0,">1 nonsynonymous","T46D D97N K198R",3
"lib2","SARS-CoV-2","CTCACCTAGTTACGAA",9,7.51,NA,NA,NA,NA,NA,NA,"stop","F44V V65* I80E G116A T140M",5
"lib2","SARS-CoV-2","CTCACCTGCTATACCC",1,8.05,8.94,-1.9,0.13,2.79,1.18,0.01,">1 nonsynonymous","S139Q A145K",2
"lib2","SARS-CoV-2","CTCACCTGTGTACCCG",1,2.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","CTCACCTTAATATACC",3,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C K56I",2
"lib2","SARS-CoV-2","CTCACGAAGACGAAGA",11,189.22,10.53,-0.3,0.04,2.85,1.11,0,">1 nonsynonymous","A33Y T100L P149W E154S",4
"lib2","SARS-CoV-2","CTCACGAATATTAACT",7,56.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S45V T85D N107K Y119L F167I",5
"lib2","SARS-CoV-2","CTCACGATCGAATTTG",3,12.4,8.73,-2.1,0.18,2.19,1.22,0.02,">1 nonsynonymous","L5P L60N G86S",3
"lib2","SARS-CoV-2","CTCACGCAAGACCAGT",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100F V181R",2
"lib2","SARS-CoV-2","CTCACGCAATCGCGGC",2,19,8.95,-1.89,0.16,1.85,1.07,0.02,"1 nonsynonymous","P82C",1
"lib2","SARS-CoV-2","CTCACGCGTCTCTAGT",1,9.55,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","Y93C S200G",2
"lib2","SARS-CoV-2","CTCACGGAATTACGCC",2,17.38,6,-4.84,2,1.67,1.1,0.02,">1 nonsynonymous","C6P V37F F62S D90R G101D",5
"lib2","SARS-CoV-2","CTCACGGAGTACGAAG",4,24.32,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N13C E135C G155W",3
"lib2","SARS-CoV-2","CTCACGGCGACCGCTA",5,29.47,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P54E L131N Y159M N171S",4
"lib2","SARS-CoV-2","CTCACGGTTACTCCTC",4,68.64,9.6,-1.23,0.05,2.05,1.08,0,">1 nonsynonymous","A14F P149V",2
"lib2","SARS-CoV-2","CTCACGTCAGTATAAA",7,11.02,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L5Q T15I S41N K48H Y93C Y165W",6
"lib2","SARS-CoV-2","CTCACGTGAAAAGTAC",3,87.23,8.61,-2.23,0.1,2.44,1.07,0,">1 nonsynonymous","Y21S Y119K",2
"lib2","SARS-CoV-2","CTCACTAAAGAACAAT",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F G174V",2
"lib2","SARS-CoV-2","CTCACTAATATAAGGA",4,24.46,11.02,0.18,0.12,2.89,1.12,0,"1 nonsynonymous","S200N",1
"lib2","SARS-CoV-2","CTCACTAATGTCAAAT",2,14.25,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T63N A81E D98Y D112M",4
"lib2","SARS-CoV-2","CTCACTATAATCCCGC",5,109.07,10.65,-0.18,0.04,2.93,1.06,0,">1 nonsynonymous","S45H N120I P197S",3
"lib2","SARS-CoV-2","CTCACTATCGTATCTA",5,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122N G146L",2
"lib2","SARS-CoV-2","CTCACTATGAATGAAT",18,14.75,NA,NA,NA,NA,NA,NA,"stop","N4* V37C Y39D T85F E141V Y175L",6
"lib2","SARS-CoV-2","CTCACTCAAATGTCTT",5,29.63,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","E10P D112A E141L V153E",4
"lib2","SARS-CoV-2","CTCACTCAATGTTTTC",3,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T A42S Q84W K94L V103I",5
"lib2","SARS-CoV-2","CTCACTCTACGTGAAA",11,153.58,8.33,-2.51,0.11,2.06,1.1,0.01,">1 nonsynonymous","G86D F156R",2
"lib2","SARS-CoV-2","CTCACTGACAGCTAAC",8,43.26,10.07,-0.77,0.05,2.74,1.03,0,">1 nonsynonymous","L5S S139Y",2
"lib2","SARS-CoV-2","CTCACTGCTGCTCCGT",4,43.46,6.16,-4.68,0.55,1.5,1.17,0.01,">1 nonsynonymous","G86K N107L E135N",3
"lib2","SARS-CoV-2","CTCACTGTACAATATT",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L F99D",2
"lib2","SARS-CoV-2","CTCACTTACCTCGCCG",7,96.45,9.05,-1.78,0.19,1.5,1.09,0.02,">1 nonsynonymous","L5Y A14Q I28P D97A L122R",5
"lib2","SARS-CoV-2","CTCACTTAGAACACGC",11,224.43,10.18,-0.65,0.04,2.63,1.02,0,"1 nonsynonymous","T15W",1
"lib2","SARS-CoV-2","CTCACTTAGTACGCGC",12,62.58,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S45D T55V G83T I88M G172A",5
"lib2","SARS-CoV-2","CTCACTTTCATAAATT",11,97.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I72H Y123G G155A Y175S",4
"lib2","SARS-CoV-2","CTCAGAAAAGTTTGGA",12,12.96,NA,NA,NA,NA,NA,NA,"stop","P7M C102D G155F Y165*",4
"lib2","SARS-CoV-2","CTCAGAAAGTAAAGAA",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83R I88Q S139L F156D",4
"lib2","SARS-CoV-2","CTCAGAACTATCTGAT",1,7.57,9.1,-1.73,0.38,1.5,1.14,0.04,">1 nonsynonymous","N13R F44A K132W",3
"lib2","SARS-CoV-2","CTCAGAAGAATTAAGT",6,14.27,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","A14V Y91P K114N N157W",4
"lib2","SARS-CoV-2","CTCAGAATATAAGACT",3,46.85,10.82,-0.02,0.04,2.99,1.03,0,"1 nonsynonymous","C195N",1
"lib2","SARS-CoV-2","CTCAGAATTTCCCACA",14,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y R127T P149S E154R",4
"lib2","SARS-CoV-2","CTCAGACAAGGTCACT",9,114.8,10.05,-0.79,0.04,2.73,1.02,0,"1 nonsynonymous","A81D",1
"lib2","SARS-CoV-2","CTCAGACAGACACTAA",5,117.91,10.85,0.01,0.05,2.92,1.06,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","CTCAGACCAAGATTGC",7,68.12,10.22,-0.61,0.06,2.89,1.09,0,"1 nonsynonymous","G51A",1
"lib2","SARS-CoV-2","CTCAGACCACTTGCTT",1,15.46,6.72,-4.12,0.64,1.5,1.07,0.07,">1 nonsynonymous","Y35T P82W P161L",3
"lib2","SARS-CoV-2","CTCAGACGAGCAGACC",2,10.57,9.16,-1.68,0.26,1.5,1.03,0.03,">1 nonsynonymous","T15H K94N D98A",3
"lib2","SARS-CoV-2","CTCAGACGATAGGAGG",24,330.57,9.99,-0.84,0.07,2.5,1.03,0,">1 nonsynonymous","S43R D59L Y66A",3
"lib2","SARS-CoV-2","CTCAGACTAAAAAACA",2,10.68,10.85,0.01,0.07,2.99,1,0,"1 nonsynonymous","K114A",1
"lib2","SARS-CoV-2","CTCAGACTAAATCATC",7,3.15,NA,NA,NA,NA,NA,NA,"stop","G101* I138Q Y175V",3
"lib2","SARS-CoV-2","CTCAGACTTGAAACAG",1,13.54,7.99,-2.85,0.19,1.96,1.02,0.02,">1 nonsynonymous","N64R Y91E",2
"lib2","SARS-CoV-2","CTCAGAGGGCCTCTAA",10,243.47,10.72,-0.11,0.05,2.92,1.08,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","CTCAGATATAATTCGA",2,7.15,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","F134P G146E",2
"lib2","SARS-CoV-2","CTCAGATCTATAAGGA",5,30.06,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9D F44E L95E",3
"lib2","SARS-CoV-2","CTCAGATGAAGGTGAG",3,17.92,6.36,-4.47,0.4,3,1.18,0.01,">1 nonsynonymous","I2R C31R C61K I142N P197T",5
"lib2","SARS-CoV-2","CTCAGATGGCTGCCTA",6,48,9.64,-1.19,0.14,2.18,1.03,0.01,">1 nonsynonymous","T3D A33I S41P W106T",4
"lib2","SARS-CoV-2","CTCAGATTAGAAGAAA",9,147.65,10.73,-0.11,0.06,2.88,1.07,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CTCAGCAAATTAATGA",14,182.23,9.39,-1.45,0.09,1.71,1.06,0,">1 nonsynonymous","A42R R127S P133E",3
"lib2","SARS-CoV-2","CTCAGCACAAAGTTGT",6,92.59,9.61,-1.23,0.08,2.03,1.07,0,">1 nonsynonymous","A89R Q168A",2
"lib2","SARS-CoV-2","CTCAGCATGCTAGTCC",9,97.38,9.71,-1.13,0.08,2.34,1,0,">1 nonsynonymous","D34S V37L F44H G116M",4
"lib2","SARS-CoV-2","CTCAGCGAACAGTCCT",2,21.7,9.58,-1.26,0.13,2.08,1,0.01,"1 nonsynonymous","P96M",1
"lib2","SARS-CoV-2","CTCAGCGAATCAATTA",1,18.1,9.33,-1.51,0.22,1.9,1.07,0.02,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","CTCAGGACTGCATAGT",10,2.66,NA,NA,NA,NA,NA,NA,"stop","C31Y F99N P161*",3
"lib2","SARS-CoV-2","CTCAGGATAAACAAAA",3,204.2,6,-4.84,1.09,1.5,1.1,0,">1 nonsynonymous","L60V T85P S113N",3
"lib2","SARS-CoV-2","CTCAGGATACCCTAGA",7,1.22,NA,NA,NA,NA,NA,NA,"stop","C61V Q79* I142K T170H",4
"lib2","SARS-CoV-2","CTCAGGATACTTATAA",2,54.63,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S19K P177Y",2
"lib2","SARS-CoV-2","CTCAGGATGGGAACGG",7,117.25,10.18,-0.66,0.03,2.83,1.05,0,">1 nonsynonymous","K56F G83L",2
"lib2","SARS-CoV-2","CTCAGGCCTGTGGTAG",1,30.59,10.65,-0.18,0.05,2.98,1.02,0,">1 nonsynonymous","N58R L122F",2
"lib2","SARS-CoV-2","CTCAGGGAAATATGAA",11,119.18,10.18,-0.66,0.05,2.77,1.06,0,"1 nonsynonymous","D34A",1
"lib2","SARS-CoV-2","CTCAGGGAACTAGATG",3,14.96,8.58,-2.26,0.09,3,1.1,0.01,"1 nonsynonymous","N157R",1
"lib2","SARS-CoV-2","CTCAGGGCAACCCTCG",7,144.73,10.83,0,0.04,2.94,1.07,0,">1 nonsynonymous","L5I A18P G146S",3
"lib2","SARS-CoV-2","CTCAGGGGACAAAAGC",9,70.98,8.33,-2.5,0.2,1.5,1.04,0.02,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","CTCAGGGTTCTTGATA",9,84.43,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F8K T85M T100I Y119R G152K",5
"lib2","SARS-CoV-2","CTCAGGTGAAATTTTG",12,79.72,9.47,-1.37,0.07,2,1.05,0,">1 nonsynonymous","A18I C61V K199T",3
"lib2","SARS-CoV-2","CTCAGGTGAACAAACC",1,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22M Y119L L125P",3
"lib2","SARS-CoV-2","CTCAGTAACTTAAGAA",4,42.37,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","K26W Q163R G172S",3
"lib2","SARS-CoV-2","CTCAGTAGGACAAGTA",11,115.11,10.76,-0.08,0.03,3,1.01,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","CTCAGTATACAACTAA",3,193.16,8.88,-1.96,0.05,2.88,1.11,0,">1 nonsynonymous","L5V T85R T170V",3
"lib2","SARS-CoV-2","CTCAGTATATGGTAGA",2,15.9,10.14,-0.7,0.09,2.98,1.09,0,">1 nonsynonymous","L95M T170S",2
"lib2","SARS-CoV-2","CTCAGTCAAGATACTA",6,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E K87G N107K F156R T170W",5
"lib2","SARS-CoV-2","CTCAGTCCCACAAACA",8,0.78,NA,NA,NA,NA,NA,NA,"stop","V37* P54K F167V",3
"lib2","SARS-CoV-2","CTCAGTGAAAATCCTA",7,47.68,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A33S C61S G74E K128F L162Q",5
"lib2","SARS-CoV-2","CTCAGTGAATCGATAT",1,20.43,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S36L T55R C102S N130F",4
"lib2","SARS-CoV-2","CTCAGTGCAAGATGTA",1,9.07,10.94,0.1,0.11,2.99,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCAGTGCAATGCAAC",16,158.21,10.48,-0.36,0.04,2.85,1.05,0,">1 nonsynonymous","S41N T55S G83W S184R",4
"lib2","SARS-CoV-2","CTCAGTGCGTAGCGAA",1,13.13,9.43,-1.4,0.14,1.95,1,0.01,">1 nonsynonymous","L5I L122P",2
"lib2","SARS-CoV-2","CTCAGTGGGTTTCAGG",6,12.56,NA,NA,NA,NA,NA,NA,"stop","N92* N109Y P149S",3
"lib2","SARS-CoV-2","CTCAGTTACCGCGTGT",1,15.44,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","V37A N64W G155R Q168P",4
"lib2","SARS-CoV-2","CTCAGTTTCGGGGGTC",7,160.9,10.13,-0.71,0.04,2.89,1.07,0,">1 nonsynonymous","F134S G166A",2
"lib2","SARS-CoV-2","CTCATAAAAAGAAGAC",15,181.01,10.83,0,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATAAACAGTCTAT",16,94.09,7.04,-3.79,0.31,1.5,1.18,0.02,">1 nonsynonymous","L5T K48I T55R F99V C195S",5
"lib2","SARS-CoV-2","CTCATAAAGAATTACG",1,22.97,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I2R V52A I88E N130S",4
"lib2","SARS-CoV-2","CTCATAAAGGATAAGA",1,18.37,8.43,-2.4,0.28,1.59,1.07,0.03,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","CTCATAACGAACTCCA",3,95.65,7.8,-3.03,0.14,1.57,1.13,0.01,">1 nonsynonymous","T46S Y119L Q144L",3
"lib2","SARS-CoV-2","CTCATAACGACTCGAA",3,26.69,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","S108M R124P",2
"lib2","SARS-CoV-2","CTCATAACGGGGGCCA",4,44.1,10.92,0.09,0.06,2.98,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","CTCATAACTAGCTAGT",6,86.62,8.53,-2.31,0.08,1.9,1.13,0,">1 nonsynonymous","T63V Y165I",2
"lib2","SARS-CoV-2","CTCATAATAAACAATG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","A18M F44*",2
"lib2","SARS-CoV-2","CTCATAATTAGCGGGG",3,30.24,6,-4.84,0.61,3,1.08,0.01,">1 nonsynonymous","K94Y D112L N120R N130T",4
"lib2","SARS-CoV-2","CTCATACAACTCAACT",1,49.8,8.99,-1.84,0.1,2.56,1.09,0,">1 nonsynonymous","L5D E10Y P149V G174M K199T",5
"lib2","SARS-CoV-2","CTCATACAATAATGGA",3,50.96,10.69,-0.14,0.05,2.88,1.13,0,">1 nonsynonymous","E141K T148L",2
"lib2","SARS-CoV-2","CTCATACATCCATGGC",3,0,NA,NA,NA,NA,NA,NA,"stop","P54* P133T E141T N157I",4
"lib2","SARS-CoV-2","CTCATACCATACAGAA",3,39.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36P T55Y N92T L162Q",4
"lib2","SARS-CoV-2","CTCATACCGAGTGACC",3,35.41,10.52,-0.32,0.07,2.75,1.03,0,">1 nonsynonymous","S36K D59W",2
"lib2","SARS-CoV-2","CTCATACGAAGATAAA",2,3.5,NA,NA,NA,NA,NA,NA,"stop","N1* E10V S19K F62Y P96T G152I",6
"lib2","SARS-CoV-2","CTCATACGTAAAAATC",10,114.31,10.57,-0.27,0.04,2.95,1.05,0,">1 nonsynonymous","V37A K94C",2
"lib2","SARS-CoV-2","CTCATACTTGAGACCC",4,95.08,10.77,-0.06,0.04,3,1.02,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","CTCATAGAAAACACTC",3,42.33,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I72T I88E",2
"lib2","SARS-CoV-2","CTCATAGAACCAGCTA",4,36.64,10.16,-0.68,0.07,2.95,1.04,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","CTCATAGATCCACCAG",7,64.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11N G86C A145V S184T",4
"lib2","SARS-CoV-2","CTCATAGATGGAGACG",10,110.5,8.96,-1.88,0.06,2.2,1.1,0,">1 nonsynonymous","N4Y N107S K114L",3
"lib2","SARS-CoV-2","CTCATAGCAAGGTGTT",9,85.1,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K114E R179L S200P",3
"lib2","SARS-CoV-2","CTCATAGGACGGGCAT",8,237.69,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","V173T Q176K",2
"lib2","SARS-CoV-2","CTCATATATAAAGAAA",4,1.06,NA,NA,NA,NA,NA,NA,"stop","A14V Y50* G101N S184P",4
"lib2","SARS-CoV-2","CTCATATTTAAACTGA",2,36.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37C P82S",2
"lib2","SARS-CoV-2","CTCATATTTAATTTGG",5,62.54,10.83,-0.01,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATCAACAACCATT",4,65.5,8.49,-2.35,0.1,2,1.07,0,">1 nonsynonymous","T63E G83L D97Y E154F",4
"lib2","SARS-CoV-2","CTCATCAATTGATTGG",6,143.46,10.86,0.03,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATCACATGGGACT",6,19.85,9.22,-1.61,0.17,1.76,1.09,0.01,">1 nonsynonymous","N1Y R16K S36P D90L",4
"lib2","SARS-CoV-2","CTCATCATAACGAGAG",2,2.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTCATCATTCCATACG",3,82.22,10.87,0.03,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATCCAGTTAGATT",10,44.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5R D112G P149T",3
"lib2","SARS-CoV-2","CTCATCCATAGTTAAT",8,80.46,10.67,-0.17,0.04,2.95,1.03,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","CTCATCCATCGACCCA",2,16.01,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2V V20S C150S",3
"lib2","SARS-CoV-2","CTCATCCATGCATGCA",2,0.41,NA,NA,NA,NA,NA,NA,"stop","D90C G146E Y165K L183*",4
"lib2","SARS-CoV-2","CTCATCCATTGAATTT",2,15.22,10.77,-0.06,0.04,3,1.01,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","CTCATCCCAATGGGGC",1,4.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","CTCATCGGACATATAT",4,32.06,6.42,-4.42,0.34,1.5,1.14,0.01,">1 nonsynonymous","V37T G86F",2
"lib2","SARS-CoV-2","CTCATCGTGTTTTTTT",6,58.04,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S19L N30G P96W F134D",4
"lib2","SARS-CoV-2","CTCATCGTTCTACAGC",1,65.52,9.32,-1.52,0.11,2.72,1.22,0.01,">1 nonsynonymous","P169L G174L",2
"lib2","SARS-CoV-2","CTCATCTAAGACGCAG",6,47.98,8.36,-2.48,0.28,1.5,1,0.04,">1 nonsynonymous","A14K S41G L95T",3
"lib2","SARS-CoV-2","CTCATCTACAACGCTA",1,44.84,10.87,0.04,0.06,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATCTCACCACATA",18,306.56,10.17,-0.67,0.03,2.83,1.04,0,">1 nonsynonymous","Y35D L188Y",2
"lib2","SARS-CoV-2","CTCATCTCGAAGAAAT",2,12.75,10.58,-0.25,0.11,2.96,1,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","CTCATCTTGAATTACT",2,42.57,9.49,-1.34,0.07,2.83,1.09,0,"1 nonsynonymous","I142E",1
"lib2","SARS-CoV-2","CTCATGAACCCCTCCG",11,284.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T140P Y165M P177L",3
"lib2","SARS-CoV-2","CTCATGAATACTTGAA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","F44N T55W Q79L I88* L183V",5
"lib2","SARS-CoV-2","CTCATGAATGCCCATA",13,204.5,8.12,-2.71,0.09,1.76,1.06,0,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","CTCATGACAAAATGCC",5,27.81,10.73,-0.1,0.05,3,1.01,0,"1 nonsynonymous","A22C",1
"lib2","SARS-CoV-2","CTCATGACCATTATAT",8,103.22,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23S C158S",2
"lib2","SARS-CoV-2","CTCATGAGCCCATGCG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","I80* S184I",2
"lib2","SARS-CoV-2","CTCATGAGGATCCAAT",3,27.01,10.01,-0.83,0.15,2.16,1.14,0.01,">1 nonsynonymous","T3G A33I L57S F99W L183I",5
"lib2","SARS-CoV-2","CTCATGAGTGATATCT",3,15.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44A P82N T140S G155T K198L",5
"lib2","SARS-CoV-2","CTCATGATACTATTCA",11,122.27,10.88,0.05,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCATGATTAACACGA",1,18.55,10.66,-0.18,0.06,2.91,1.08,0,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","CTCATGCATACGCTGT",5,110.92,10.25,-0.59,0.04,2.87,1.06,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","CTCATGGAATAACCAG",3,38.92,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N4L N40F E76V D90S L183A",5
"lib2","SARS-CoV-2","CTCATGGGTCACCACT",8,52.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E C61R G86Y N151Y",4
"lib2","SARS-CoV-2","CTCATGGGTTGTCAAC",2,19.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P7E R27A G51P N107S A190R",5
"lib2","SARS-CoV-2","CTCATGGTACGCAAGG",1,9.58,10.51,-0.32,0.16,2.81,1.2,0.01,"1 nonsynonymous","S129Q",1
"lib2","SARS-CoV-2","CTCATGGTTTAGTAAC",4,153.65,10.8,-0.04,0.04,2.94,1.06,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","CTCATTAACATACATT",2,54.46,9.19,-1.65,0.05,1.95,1.04,0,">1 nonsynonymous","E10M S43N T55D S69E L122S",5
"lib2","SARS-CoV-2","CTCATTAATAGGAGGG",2,14.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37W P82K P96W",3
"lib2","SARS-CoV-2","CTCATTAATCCCTCTT",1,6.55,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3M I28L F44G Y93S Q168E",5
"lib2","SARS-CoV-2","CTCATTAATTCGCATG",14,114.84,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N64K S69M N92T N120G N157G S200V",6
"lib2","SARS-CoV-2","CTCATTACGAAACGGA",11,1.18,NA,NA,NA,NA,NA,NA,"stop","G9F S41T N110Y V173* K199N",5
"lib2","SARS-CoV-2","CTCATTACGATGCCCC",3,10.84,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","Y93A Y119A Q168C",3
"lib2","SARS-CoV-2","CTCATTAGAAACAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* I72V P133S",3
"lib2","SARS-CoV-2","CTCATTAGTAATCCAT",5,42.17,8.81,-2.03,0.15,1.67,1.16,0.01,">1 nonsynonymous","K26A D90F G152C",3
"lib2","SARS-CoV-2","CTCATTATAAGTACGT",7,126.68,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N64I P177F",2
"lib2","SARS-CoV-2","CTCATTATAATACAAA",4,3.07,NA,NA,NA,NA,NA,NA,"stop","E10* C49S",2
"lib2","SARS-CoV-2","CTCATTATTTGTTTAT",3,47.48,7.98,-2.86,0.16,1.97,1.11,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","CTCATTCAAACTAAAG",17,82.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54M I104K S147A N157R",4
"lib2","SARS-CoV-2","CTCATTCAACCCCTAC",3,65.33,9.47,-1.37,0.04,2.95,1.07,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","CTCATTCATACAAGAG",13,140.93,10.89,0.05,0.05,2.92,1.09,0,">1 nonsynonymous","D98N S164R",2
"lib2","SARS-CoV-2","CTCATTCTCCACGAAC",2,13,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","W23Q C61G",2
"lib2","SARS-CoV-2","CTCATTGCCCGAAACT",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S V20G K56P E76N Q176P",5
"lib2","SARS-CoV-2","CTCATTGTTATAGCGT",7,113.54,8.49,-2.34,0.12,2.22,1.09,0.01,">1 nonsynonymous","V77C Y119G",2
"lib2","SARS-CoV-2","CTCATTGTTCAACCGT",2,8.44,10.94,0.11,0.12,3,1.02,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTCATTTGTTCCCGAC",1,10.62,10.35,-0.48,0.23,2.28,1.09,0.03,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","CTCATTTTCCAACGGA",3,65.96,6.2,-4.64,0.54,1.5,1.11,0.02,">1 nonsynonymous","F99P E154S",2
"lib2","SARS-CoV-2","CTCCAAAACATTCGAG",2,19.56,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4G L5I A14F I88T F99L",5
"lib2","SARS-CoV-2","CTCCAAAACCACCTAA",4,10.17,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103H G174F",2
"lib2","SARS-CoV-2","CTCCAAAAGGGAATAA",8,126.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36F T100N W106S V182I",4
"lib2","SARS-CoV-2","CTCCAAACATGCCCCG",2,11.37,10.41,-0.43,0.06,3,1,0,">1 nonsynonymous","V115P F134K",2
"lib2","SARS-CoV-2","CTCCAAACTATACAAT",6,159.63,10.82,-0.02,0.06,2.91,1.11,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","CTCCAAAGGAAAAGAA",2,37.63,10.5,-0.33,0.05,2.98,1,0,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","CTCCAAATAAACCCCT",1,5.94,10.19,-0.65,0.21,2.66,1,0.01,">1 nonsynonymous","L60P A105S",2
"lib2","SARS-CoV-2","CTCCAAATACTAGACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A67S S113*",2
"lib2","SARS-CoV-2","CTCCAAATACTCAAAC",3,44.97,9.96,-0.88,0.08,2.63,1.05,0,">1 nonsynonymous","D34T A67L",2
"lib2","SARS-CoV-2","CTCCAAATCACTGACG",4,92.98,10.85,0.01,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCAAATCATAGATA",1,53.89,10.76,-0.08,0.04,2.9,1.12,0,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","CTCCAAATTAGAACCA",2,38.64,10.9,0.06,0.06,2.98,1.05,0,"1 nonsynonymous","V173N",1
"lib2","SARS-CoV-2","CTCCAAATTCAACATA",2,101.54,9.64,-1.19,0.05,2.87,1.09,0,">1 nonsynonymous","K87S E154P",2
"lib2","SARS-CoV-2","CTCCAACAATTTTTTA",5,44.39,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W106G R127S Y143A C158I K198E",5
"lib2","SARS-CoV-2","CTCCAACACTGTATAC",2,57.7,6.75,-4.09,0.49,1.5,1.13,0.06,">1 nonsynonymous","F44M L95V P177M T201K",4
"lib2","SARS-CoV-2","CTCCAACATAGGGTCT",3,6.33,6,-4.84,2,3,1.1,0,">1 nonsynonymous","W23L R73C P96A",3
"lib2","SARS-CoV-2","CTCCAACCTTGACACA",4,88.86,10.54,-0.29,0.05,3,1,0,"1 nonsynonymous","G174D",1
"lib2","SARS-CoV-2","CTCCAACGCAATGACA",3,64.39,10.2,-0.64,0.04,3,1,0,">1 nonsynonymous","C6Y K87T L122N",3
"lib2","SARS-CoV-2","CTCCAACGCGATAAGC",3,11.31,6.18,-4.65,0.74,1.5,1.1,0.04,">1 nonsynonymous","V103K G155Y N171L",3
"lib2","SARS-CoV-2","CTCCAACTCAAAATTA",2,23.55,10.03,-0.81,0.1,2.61,1,0.01,">1 nonsynonymous","I28S T55N",2
"lib2","SARS-CoV-2","CTCCAACTCATACGAG",2,0.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","CTCCAAGAAATGGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55A K94V A192T S200V",4
"lib2","SARS-CoV-2","CTCCAAGGTAACCCGG",1,6.36,10.78,-0.06,0.07,3,1.04,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","CTCCAAGTAAGTCAGC",2,64.47,6,-4.84,1.44,1.5,1.11,0.01,"1 nonsynonymous","C158F",1
"lib2","SARS-CoV-2","CTCCAAGTTCTGGTTT",4,0,NA,NA,NA,NA,NA,NA,"stop","S19T N92*",2
"lib2","SARS-CoV-2","CTCCAATAAATGGCGT",15,270.86,9.97,-0.87,0.04,2.84,1.06,0,">1 nonsynonymous","A42L N118Y",2
"lib2","SARS-CoV-2","CTCCAATAGATATAGG",5,2.32,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTCCAATATAAATGTG",1,6.84,10.03,-0.81,0.17,2.95,1,0.01,">1 nonsynonymous","N24T Y119S S184Y",3
"lib2","SARS-CoV-2","CTCCAATATCTATCAC",6,28.75,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V52H C61R N107F",3
"lib2","SARS-CoV-2","CTCCAATCCATTCATT",3,21.34,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","K26Q K48P A105W",3
"lib2","SARS-CoV-2","CTCCAATGAAATATCC",3,37.89,9.57,-1.27,0.16,1.91,1.06,0.01,">1 nonsynonymous","N13Y A81M",2
"lib2","SARS-CoV-2","CTCCAATGTCTACTAA",4,63.04,10.93,0.09,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCAATTAAAGTTAA",11,270.25,9.43,-1.41,0.04,2.91,1.09,0,">1 nonsynonymous","S45D Y119S V173I",3
"lib2","SARS-CoV-2","CTCCAATTATAAGCTA",7,2.11,NA,NA,NA,NA,NA,NA,"stop","L5* S129W S147Y K199N",4
"lib2","SARS-CoV-2","CTCCACAAAAAACTGC",2,30.83,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S29G R124H",2
"lib2","SARS-CoV-2","CTCCACAAACCGTGGC",9,67.57,10.76,-0.07,0.07,2.89,1.1,0,">1 nonsynonymous","S41H K199T",2
"lib2","SARS-CoV-2","CTCCACAAGGTCTAAT",4,21.55,10.21,-0.63,0.08,2.92,1.09,0,">1 nonsynonymous","D97R P169F",2
"lib2","SARS-CoV-2","CTCCACAATCAAATAT",3,27.27,10.78,-0.05,0.05,3,1.02,0,">1 nonsynonymous","N64Y E141A",2
"lib2","SARS-CoV-2","CTCCACACCTGCCTCA",3,52.87,10.62,-0.22,0.06,2.89,1.04,0,">1 nonsynonymous","T3F P133A",2
"lib2","SARS-CoV-2","CTCCACAGTACGTAAG",3,0.08,NA,NA,NA,NA,NA,NA,"stop","V52C V71* I138S F185L",4
"lib2","SARS-CoV-2","CTCCACATCAATAACA",1,15.33,10.08,-0.75,0.09,2.89,1,0.01,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","CTCCACCCATCACAAT",2,11.68,8.51,-2.33,0.25,2.68,1,0.02,">1 nonsynonymous","V37C T100K N171P",3
"lib2","SARS-CoV-2","CTCCACCCATCATACC",15,72.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8R N30G F99H G146S P169S",5
"lib2","SARS-CoV-2","CTCCACCTCCTAGGAA",7,16.18,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C49R Y159V",2
"lib2","SARS-CoV-2","CTCCACGTGAAAGTTT",12,255.7,10.13,-0.71,0.04,2.63,1.07,0,">1 nonsynonymous","A42W G83W",2
"lib2","SARS-CoV-2","CTCCACTACACAACAG",3,44.64,8.85,-1.98,0.09,2.45,1,0,">1 nonsynonymous","C61G Y121P I138V",3
"lib2","SARS-CoV-2","CTCCACTACGTGATCT",6,281.54,9.98,-0.85,0.05,2.84,1.07,0,">1 nonsynonymous","D59E L125V",2
"lib2","SARS-CoV-2","CTCCACTCTTGAGGCA",1,65.08,10.79,-0.04,0.06,2.96,1.05,0,">1 nonsynonymous","T148G K198T",2
"lib2","SARS-CoV-2","CTCCACTGTTTCCCAG",2,56.98,10.18,-0.66,0.06,2.76,1.03,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","CTCCACTTACTGCAGC",4,18.38,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","K56N G74F T100A P169Q P177R",5
"lib2","SARS-CoV-2","CTCCACTTTGTCAGTT",3,113.79,10.65,-0.19,0.04,2.94,1.05,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","CTCCAGAACATTGACG",4,3.81,NA,NA,NA,NA,NA,NA,"stop","N92S D98A I138*",3
"lib2","SARS-CoV-2","CTCCAGAAGCAGCTTT",4,47.78,10.12,-0.71,0.08,2.48,1.02,0,">1 nonsynonymous","V65S T140L",2
"lib2","SARS-CoV-2","CTCCAGAGTAATATCT",9,288.1,10.62,-0.22,0.03,2.93,1.05,0,">1 nonsynonymous","K48I T55F",2
"lib2","SARS-CoV-2","CTCCAGAGTTTCAGGT",4,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S N171H",2
"lib2","SARS-CoV-2","CTCCAGCATTATTGTT",5,2.57,NA,NA,NA,NA,NA,NA,"stop","Y91M D97* G101A N109K N130K G174W",6
"lib2","SARS-CoV-2","CTCCAGGAGAAACAAA",15,108.88,8.62,-2.21,0.07,2.9,1.08,0,">1 nonsynonymous","G9V A145Y",2
"lib2","SARS-CoV-2","CTCCAGGGACATACTG",1,6.22,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTCCAGTTTGTAGAGC",5,87.02,9.1,-1.74,0.11,2.39,1.1,0,">1 nonsynonymous","S41G D112E",2
"lib2","SARS-CoV-2","CTCCATAACAGAAACA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I L60N",2
"lib2","SARS-CoV-2","CTCCATAATCAATCAT",5,55.03,10.05,-0.79,0.05,3,1,0,"1 nonsynonymous","F126H",1
"lib2","SARS-CoV-2","CTCCATACAACGACAT",3,10.1,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2V T15Y Y35C A89G F99L K128F R136E",7
"lib2","SARS-CoV-2","CTCCATACCATGAAAC",6,113.02,10.82,-0.01,0.04,2.93,1.08,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","CTCCATATAAGAATAG",4,10.56,6.19,-4.65,0.93,1.5,1.12,0.03,">1 nonsynonymous","K56V S108L",2
"lib2","SARS-CoV-2","CTCCATATTAGAAACA",4,96.31,10.5,-0.34,0.04,2.96,1.04,0,"1 nonsynonymous","E10R",1
"lib2","SARS-CoV-2","CTCCATATTCAGGCAT",18,201.56,10.8,-0.04,0.06,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCATCATTACTATT",8,123.7,9.64,-1.2,0.05,2.1,1.02,0,">1 nonsynonymous","F126L P133N",2
"lib2","SARS-CoV-2","CTCCATCCGTTTGCGT",5,58.35,8.91,-1.92,0.15,1.83,1.16,0.01,">1 nonsynonymous","I142S Q163V Q176A",3
"lib2","SARS-CoV-2","CTCCATGAATCGAGTC",7,3.03,NA,NA,NA,NA,NA,NA,"stop","N1L W106* Y123G A145P G155I Y175G",6
"lib2","SARS-CoV-2","CTCCATGAGAAGAACC",11,100.57,10.91,0.07,0.05,2.94,1.08,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","CTCCATTACAAATGGC",5,75.43,10.79,-0.05,0.03,2.9,1.09,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","CTCCATTCCACGCATA",3,54.46,8.59,-2.25,0.07,2.73,1.08,0,">1 nonsynonymous","C6S N118T",2
"lib2","SARS-CoV-2","CTCCATTGACGATCCT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","Y159*",1
"lib2","SARS-CoV-2","CTCCATTTAACGAATA",3,72.93,10.81,-0.03,0.04,2.91,1.09,0,"1 nonsynonymous","Y178F",1
"lib2","SARS-CoV-2","CTCCCAAAACGCAATT",18,277.35,10,-0.83,0.05,2.43,1.07,0,"1 nonsynonymous","I28S",1
"lib2","SARS-CoV-2","CTCCCAAAACGTAAAT",1,41.57,10.02,-0.81,0.07,2.66,1,0,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","CTCCCAAAATTGCCCG",1,8.27,6.56,-4.27,0.43,1.99,1.02,0.03,">1 nonsynonymous","K56L A105R",2
"lib2","SARS-CoV-2","CTCCCAAATCAACTAT",2,14.67,8.58,-2.26,0.19,2.96,1.01,0.01,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","CTCCCAACAGCAAGAT",5,63.96,6,-4.84,1.99,1.5,1.1,0.02,">1 nonsynonymous","Q84Y D90R R127T G152S",4
"lib2","SARS-CoV-2","CTCCCAAGACCTCTTG",8,34.9,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14M V37L L95S V103I C158S",5
"lib2","SARS-CoV-2","CTCCCAAGGCTACTTA",2,46.33,10.91,0.07,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCCAAGTTTTTACG",7,11.73,NA,NA,NA,NA,NA,NA,"stop","V37S D59M P82A Q84W P96* N120R",6
"lib2","SARS-CoV-2","CTCCCAATATAGCAAA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","V77K A89S S129* S184K",4
"lib2","SARS-CoV-2","CTCCCAATCTGGATCG",1,0.64,NA,NA,NA,NA,NA,NA,"stop","Y21M D34V Y35* D98Y G172S T201R",6
"lib2","SARS-CoV-2","CTCCCACACTCCCATC",4,1.63,NA,NA,NA,NA,NA,NA,"stop","S41* E76T A81V P149N",4
"lib2","SARS-CoV-2","CTCCCACAGACTATAG",1,24.48,10.66,-0.18,0.09,2.82,1.08,0,"1 nonsynonymous","G83N",1
"lib2","SARS-CoV-2","CTCCCACAGGAGAGCT",10,66.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48E K56I D68L Q84N",4
"lib2","SARS-CoV-2","CTCCCACAGGAGTTAG",4,1,NA,NA,NA,NA,NA,NA,"stop","Y91* S113* G152S",3
"lib2","SARS-CoV-2","CTCCCACCCAGTCAGC",4,16.3,8.28,-2.56,0.46,1.5,1,0.07,">1 nonsynonymous","A14T F70L V71K I88N E141A",5
"lib2","SARS-CoV-2","CTCCCACTAATGCCAA",7,57.89,10.79,-0.05,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCCAGATAGATTCA",8,167.38,10.06,-0.78,0.05,2.7,1.07,0,">1 nonsynonymous","D59A Y66S",2
"lib2","SARS-CoV-2","CTCCCAGATGGTTTTT",6,13.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13F A42M V71E A81F D97W G174T",6
"lib2","SARS-CoV-2","CTCCCAGTAGCGAAAA",9,18.51,6,-4.84,2,3,1.32,0.02,">1 nonsynonymous","R27I F44A L95H I138S",4
"lib2","SARS-CoV-2","CTCCCAGTCCGACGAC",6,13.8,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1S T46Y I104R S113T",4
"lib2","SARS-CoV-2","CTCCCATAAACCCATA",4,66.23,9.45,-1.38,0.04,2.93,1.1,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","CTCCCATACATAAGTG",4,81.55,10.62,-0.21,0.04,2.89,1.13,0,">1 nonsynonymous","K56G S184C",2
"lib2","SARS-CoV-2","CTCCCATACCACTCAT",3,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R D34L S69V",3
"lib2","SARS-CoV-2","CTCCCATACTATAGTC",1,18.42,10.12,-0.72,0.08,2.85,1,0,">1 nonsynonymous","T85M Y121F K132G",3
"lib2","SARS-CoV-2","CTCCCATCCCCGACGT",2,7.27,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L57K T63N G86S K198H",4
"lib2","SARS-CoV-2","CTCCCATCGGACAAAC",2,21.19,10,-0.83,0.17,2.43,1.08,0.02,">1 nonsynonymous","A18T D90C",2
"lib2","SARS-CoV-2","CTCCCATGTACTAGAC",28,137.3,6,-4.84,1.19,1.5,1.2,0.01,">1 nonsynonymous","V52D V65R Y119H G155D",4
"lib2","SARS-CoV-2","CTCCCATTACAAAGTC",20,471.04,10.3,-0.54,0.03,2.78,1.03,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","CTCCCATTACACGAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107T E141S",2
"lib2","SARS-CoV-2","CTCCCATTTATCTTTA",2,11.46,9.94,-0.89,0.21,1.92,1.12,0.03,">1 nonsynonymous","I28R T201W",2
"lib2","SARS-CoV-2","CTCCCCAAAAACAGAT",5,57.92,9.45,-1.39,0.13,2.16,1.13,0.01,">1 nonsynonymous","D90I V115H L122T",3
"lib2","SARS-CoV-2","CTCCCCAAATAAAAAG",8,59.02,9.71,-1.13,0.08,2.07,1.02,0,">1 nonsynonymous","N1I S41Y V65H",3
"lib2","SARS-CoV-2","CTCCCCACCATTCGAC",5,4.12,NA,NA,NA,NA,NA,NA,"stop","A67C C102V N107M G155*",4
"lib2","SARS-CoV-2","CTCCCCACCCCATAAA",6,145.86,10.75,-0.09,0.03,2.95,1.06,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","CTCCCCACTACGAAAT",9,42.56,10.93,0.09,0.07,2.9,1.13,0,">1 nonsynonymous","D98A P197I",2
"lib2","SARS-CoV-2","CTCCCCAGTAGAATTG",1,15.24,10.36,-0.48,0.07,2.84,1.03,0,">1 nonsynonymous","A14K N109I",2
"lib2","SARS-CoV-2","CTCCCCAGTCATCCGA",1,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S V103A F160R G166D",4
"lib2","SARS-CoV-2","CTCCCCATATTAAAAG",3,0.18,NA,NA,NA,NA,NA,NA,"stop","N92* V103Q N120L",3
"lib2","SARS-CoV-2","CTCCCCATCGATAAAT",2,45.95,10.28,-0.56,0.06,2.87,1.03,0,">1 nonsynonymous","V37A F44V L57I",3
"lib2","SARS-CoV-2","CTCCCCCAAGATCTAG",3,110.78,9.04,-1.79,0.13,1.6,1.15,0.01,">1 nonsynonymous","T55S G146W S164H Y178S",4
"lib2","SARS-CoV-2","CTCCCCCTATATGGAC",3,48.74,10.88,0.05,0.1,2.83,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCCCCTTCAAATGG",6,169.83,10.03,-0.81,0.06,2.55,1.06,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","CTCCCCTACTTTGTCT",11,110.8,7.31,-3.53,0.22,1.5,1.12,0.01,">1 nonsynonymous","S69R S113G K128M A192M",4
"lib2","SARS-CoV-2","CTCCCCTCCTTGTCCT",9,148.41,10.69,-0.15,0.02,3,1.02,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","CTCCCCTTCAGAAAGT",3,52.16,9.5,-1.34,0.1,2.05,1.04,0,">1 nonsynonymous","F8A R16S V37M R136Q",4
"lib2","SARS-CoV-2","CTCCCGAAATTACCAA",19,123.39,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T3A A14V Y21S G117I A145C L162H",6
"lib2","SARS-CoV-2","CTCCCGAGCGCACATC",1,5.05,9.41,-1.43,0.16,2.77,1.18,0.01,">1 nonsynonymous","R16K T55I K87G G116R",4
"lib2","SARS-CoV-2","CTCCCGATCGCGTGAC",15,369.21,10.25,-0.59,0.03,2.78,1.05,0,">1 nonsynonymous","N4Y S43V G83A",3
"lib2","SARS-CoV-2","CTCCCGATTCCCAGCC",5,27.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F47D Y121L S139I",3
"lib2","SARS-CoV-2","CTCCCGCAAATTTCTG",1,32.91,8.68,-2.16,0.27,1.5,1.07,0.03,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","CTCCCGCATTATCGGG",7,76.97,10.12,-0.71,0.03,2.94,1.04,0,">1 nonsynonymous","V37W L111S V173A",3
"lib2","SARS-CoV-2","CTCCCGCCTATACAAA",11,41.05,7.29,-3.55,0.23,1.5,1.18,0.01,">1 nonsynonymous","P7L S19T G155A",3
"lib2","SARS-CoV-2","CTCCCGTAAAGCCGCC",2,65.53,10.88,0.04,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCCGTTACCAGCAT",1,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y V103F F156G T201L",4
"lib2","SARS-CoV-2","CTCCCTAAGGAATGGT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G R73S K114F V182S",4
"lib2","SARS-CoV-2","CTCCCTAATTAGATTG",2,34.18,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","N4Q K56S K87I L95M K114H Y123K R179V",7
"lib2","SARS-CoV-2","CTCCCTACTCTTGTCC",3,91.29,10.27,-0.56,0.04,2.85,1.11,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","CTCCCTATACTAAGCA",5,18.45,9.28,-1.56,0.22,1.88,1.18,0.02,">1 nonsynonymous","L5S Y21I A33T E141D",4
"lib2","SARS-CoV-2","CTCCCTATTATTCAAA",2,72.66,10.48,-0.35,0.05,2.89,1.09,0,">1 nonsynonymous","G116I I138L",2
"lib2","SARS-CoV-2","CTCCCTCCCAGCCGCA",2,3.79,NA,NA,NA,NA,NA,NA,"stop","G9V W23* I142T V173I",4
"lib2","SARS-CoV-2","CTCCCTCGGACACGCT",5,19.63,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","E76G F167R",2
"lib2","SARS-CoV-2","CTCCCTCTGCACTGCG",13,96.38,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D68K A105C K114Y P133M",4
"lib2","SARS-CoV-2","CTCCCTGCGCCAAGGA",5,59.49,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","G172K",1
"lib2","SARS-CoV-2","CTCCCTGTAAAAATCT",1,8.56,9.47,-1.37,0.25,1.68,1.04,0.02,">1 nonsynonymous","N13S E135V S164N",3
"lib2","SARS-CoV-2","CTCCCTGTCACAAATC",1,37.18,10.58,-0.25,0.07,2.9,1.11,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","CTCCCTGTGACAAACG",4,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S G51I D112F",3
"lib2","SARS-CoV-2","CTCCCTTAGACTGAGA",5,12.99,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","Y39R I72F",2
"lib2","SARS-CoV-2","CTCCGAAAACGATATT",3,63.27,9.35,-1.48,0.1,2.13,1.03,0,">1 nonsynonymous","C61S I72M",2
"lib2","SARS-CoV-2","CTCCGAAAACTCCAGC",2,13.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1R W106S Y123N N130D",4
"lib2","SARS-CoV-2","CTCCGAAAATTTATAT",2,37.1,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4V K128T C150L",3
"lib2","SARS-CoV-2","CTCCGAAAGTTTTTGG",15,178.42,8.48,-2.35,0.1,1.57,1.09,0,">1 nonsynonymous","Y35A D98G N118Y",3
"lib2","SARS-CoV-2","CTCCGAAGGTAACTCA",5,210.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11R T55R I72F R179C",4
"lib2","SARS-CoV-2","CTCCGAAGTCAAAGAG",1,90.47,8.96,-1.87,0.09,2.42,1.12,0,">1 nonsynonymous","L60T K94A Y159H",3
"lib2","SARS-CoV-2","CTCCGAATAGATAATA",2,41.81,10.26,-0.58,0.04,2.87,1.05,0,">1 nonsynonymous","E10D A33R",2
"lib2","SARS-CoV-2","CTCCGAATCAAGTTTG",10,3.04,NA,NA,NA,NA,NA,NA,"stop","N13S V77G G86N D112* Y121M C150K",6
"lib2","SARS-CoV-2","CTCCGACAAAGGGAAG",5,109.55,9.9,-0.94,0.04,2.37,1.05,0,">1 nonsynonymous","A14F T201G",2
"lib2","SARS-CoV-2","CTCCGACCACAGACGG",3,0.55,NA,NA,NA,NA,NA,NA,"stop","S129V N171*",2
"lib2","SARS-CoV-2","CTCCGACCGTGTTACT",6,31.35,6.01,-4.83,1.14,1.5,1.19,0.03,">1 nonsynonymous","T3V A14L D137C G174S",4
"lib2","SARS-CoV-2","CTCCGACTATAACATA",8,25.69,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","A18L A67R W106R S113A E141K",5
"lib2","SARS-CoV-2","CTCCGAGATAATCTCG",10,56.74,6.16,-4.68,1.21,1.5,1.26,0.03,">1 nonsynonymous","C6L V65H E135R",3
"lib2","SARS-CoV-2","CTCCGAGTATTATAAC",8,73.05,10.89,0.06,0.05,2.88,1.1,0,">1 nonsynonymous","L122V Y143F T201Q",3
"lib2","SARS-CoV-2","CTCCGATAACCCGCCT",12,264.08,10.01,-0.82,0.05,2.64,1.07,0,">1 nonsynonymous","Y91S T201W",2
"lib2","SARS-CoV-2","CTCCGATGCTAATATG",4,22.11,9.01,-1.83,0.1,2.08,1.02,0,">1 nonsynonymous","S41M P161C",2
"lib2","SARS-CoV-2","CTCCGCAAGCCAAGGT",5,116.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P82K I142L F167R",3
"lib2","SARS-CoV-2","CTCCGCAATAACGGGA",1,11.58,10.29,-0.55,0.11,3,1,0.01,">1 nonsynonymous","K56G N110H K114H I138R Q163G",5
"lib2","SARS-CoV-2","CTCCGCAATTAATAAC",4,39.92,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","K114A Y159S",2
"lib2","SARS-CoV-2","CTCCGCATACATGATT",9,77.38,9.51,-1.32,0.06,1.9,1.05,0,">1 nonsynonymous","S69K K114T",2
"lib2","SARS-CoV-2","CTCCGCATATATTATC",3,54.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F62Y D68G S113W G174V",4
"lib2","SARS-CoV-2","CTCCGCCGGTATGCGA",13,388.97,9.47,-1.37,0.05,1.87,1.04,0,">1 nonsynonymous","A105L S184T",2
"lib2","SARS-CoV-2","CTCCGCGAATAACACT",1,36.5,6,-4.84,2,2.51,1.15,0,">1 nonsynonymous","D90N G101L E135L",3
"lib2","SARS-CoV-2","CTCCGCGACTAAGTGA",2,353.6,10.24,-0.6,0.08,2.44,1,0,">1 nonsynonymous","N1S N13F T201V",3
"lib2","SARS-CoV-2","CTCCGCGCAACAAATG",1,8.93,10.41,-0.43,0.09,2.95,1.1,0,">1 nonsynonymous","F44D S200P",2
"lib2","SARS-CoV-2","CTCCGCTGGTCGAACT",1,6.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9I A14D D90P E154I",4
"lib2","SARS-CoV-2","CTCCGCTTATATAGAA",10,92.92,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y35L G86P A190V",3
"lib2","SARS-CoV-2","CTCCGGGAACGAACTA",2,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60A A81V Y91I P133M V182P",5
"lib2","SARS-CoV-2","CTCCGGGGTACGTTTC",17,330.42,10.27,-0.57,0.02,2.85,1.02,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","CTCCGGTAATTCGTTA",2,96.96,10.9,0.07,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCGGTCAATTAACA",3,26.74,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","Y21M S113N",2
"lib2","SARS-CoV-2","CTCCGGTGGCCAGGGC",4,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A I104S T201V",3
"lib2","SARS-CoV-2","CTCCGGTTAGATATCG",1,121.35,9.94,-0.89,0.04,2.6,1.04,0,">1 nonsynonymous","G83A L122V F134L",3
"lib2","SARS-CoV-2","CTCCGTAAAATCTAAA",10,56.34,10.22,-0.61,0.05,2.8,1.06,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","CTCCGTAAATAGGACC",2,34.79,10.93,0.1,0.05,2.86,1.13,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","CTCCGTAACTGTACCA",2,50.14,10.87,0.03,0.07,2.95,1.06,0,"1 nonsynonymous","S200P",1
"lib2","SARS-CoV-2","CTCCGTAATGCTTTGT",4,79.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12G Y21A N40L N157F",4
"lib2","SARS-CoV-2","CTCCGTACCAGGTCGC",2,61.29,10.9,0.06,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCGTAGCACTAATT",3,59.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101C Y123T",2
"lib2","SARS-CoV-2","CTCCGTAGCCATTGCA",10,76.41,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C6R G86N",2
"lib2","SARS-CoV-2","CTCCGTATCACACAAC",2,26.85,7.51,-3.33,0.13,2.22,1.12,0,">1 nonsynonymous","G116E F160Y G172S",3
"lib2","SARS-CoV-2","CTCCGTCATCCATGCG",6,147.64,10.14,-0.69,0.07,2.7,1.04,0,">1 nonsynonymous","Y35S N120S T148V",3
"lib2","SARS-CoV-2","CTCCGTGCACCCAGCC",2,72.41,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","E141K Q176Y",2
"lib2","SARS-CoV-2","CTCCGTGCGTTATTTA",5,56.93,10.25,-0.59,0.03,2.91,1.04,0,"1 nonsynonymous","V65S",1
"lib2","SARS-CoV-2","CTCCGTTATGACCATA",4,52.42,10.88,0.05,0.05,2.97,1.05,0,">1 nonsynonymous","I2K V153H",2
"lib2","SARS-CoV-2","CTCCGTTCGATCTAAC",9,35.17,6.4,-4.44,0.53,1.5,1.15,0.03,">1 nonsynonymous","A18P Y39P T55F Q84N C102W Y123F",6
"lib2","SARS-CoV-2","CTCCGTTGCAAATACA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13K D34K S41A P82L",4
"lib2","SARS-CoV-2","CTCCGTTTCAAACCTA",5,76.02,9.57,-1.26,0.08,2.4,1.01,0,">1 nonsynonymous","G51L G155A",2
"lib2","SARS-CoV-2","CTCCTAAAATTTTGAT",20,5.15,NA,NA,NA,NA,NA,NA,"stop","S108* T201R",2
"lib2","SARS-CoV-2","CTCCTAAACGCGGTCC",6,72.21,10.76,-0.07,0.06,2.93,1.08,0,">1 nonsynonymous","Y35I C61L",2
"lib2","SARS-CoV-2","CTCCTAAAGGATATTT",5,77.48,10.36,-0.48,0.03,2.89,1.11,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","CTCCTAAAGGCTGAAT",5,10.09,6.94,-3.89,1.36,3,1.27,0.02,">1 nonsynonymous","V37Y N64Y A105N P161N P177T",5
"lib2","SARS-CoV-2","CTCCTAACAATTGCGT",2,80.76,10.48,-0.36,0.05,2.94,1.07,0,">1 nonsynonymous","K114F N120D",2
"lib2","SARS-CoV-2","CTCCTAACGAAATAAA",6,72.84,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N118T G172V",2
"lib2","SARS-CoV-2","CTCCTAAGTTTATCTG",25,365.82,10.34,-0.49,0.02,2.85,1.09,0,">1 nonsynonymous","F44V D97P",2
"lib2","SARS-CoV-2","CTCCTAATGATACAAC",7,95.12,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R27Q A89L N107S T148W",4
"lib2","SARS-CoV-2","CTCCTAATTGTCAATA",1,23.76,10.96,0.13,0.12,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCTACAATTGCAAA",6,93.65,10.52,-0.32,0.05,3,1,0,">1 nonsynonymous","F62S Y123S",2
"lib2","SARS-CoV-2","CTCCTACACAAATTCA",11,62.86,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","K94S D112G",2
"lib2","SARS-CoV-2","CTCCTACCGAGAGCAA",14,217.44,10.81,-0.02,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCCTACGAGCTATGG",17,63.11,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","R73L W106S",2
"lib2","SARS-CoV-2","CTCCTACTAAACCGAT",8,207.27,9.3,-1.53,0.13,1.6,1.1,0.01,">1 nonsynonymous","Y91R K114R P133Y H189N",4
"lib2","SARS-CoV-2","CTCCTAGCCACCTTGC",1,21.4,10.87,0.04,0.11,2.86,1.16,0.01,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","CTCCTATAAAAATCCC",2,34.77,10.5,-0.33,0.09,2.88,1.12,0,">1 nonsynonymous","L60H V103I",2
"lib2","SARS-CoV-2","CTCCTATGAAAGAAAA",3,24.43,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E135N Y178P",2
"lib2","SARS-CoV-2","CTCCTATGACTTATTT",9,122.18,10.77,-0.07,0.06,2.8,1.16,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","CTCCTATTACCCCTTA",9,63.29,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R27A T85G R127V",3
"lib2","SARS-CoV-2","CTCCTATTGTCAAGCA",10,94.57,10.82,-0.02,0.04,2.87,1.13,0,"1 nonsynonymous","S53V",1
"lib2","SARS-CoV-2","CTCCTCAAGCAATCTT",17,115.62,9.37,-1.47,0.12,1.83,1.08,0.01,"1 nonsynonymous","F8R",1
"lib2","SARS-CoV-2","CTCCTCAATCAAGATG",3,26.65,7.96,-2.87,0.17,1.83,1.19,0.01,">1 nonsynonymous","D97V G116L Q144L",3
"lib2","SARS-CoV-2","CTCCTCAATGCGCCCA",5,25.44,9.5,-1.33,0.17,2.36,1.13,0.01,"1 nonsynonymous","S19M",1
"lib2","SARS-CoV-2","CTCCTCACATTTACCA",3,75.01,10.5,-0.34,0.05,2.92,1.04,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","CTCCTCAGATAAATCC",3,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V I88C P96S",3
"lib2","SARS-CoV-2","CTCCTCAGTAAATCAT",3,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y F70E",2
"lib2","SARS-CoV-2","CTCCTCATGATAGCTT",1,7.58,10.18,-0.66,0.54,1.5,1,0.05,">1 nonsynonymous","F12M A105M N110V",3
"lib2","SARS-CoV-2","CTCCTCCCAAAGATTG",8,35.68,9.53,-1.31,0.2,1.5,1.11,0.02,">1 nonsynonymous","Y91L W106V",2
"lib2","SARS-CoV-2","CTCCTCGACTAATAAG",2,11.36,6,-4.84,2,3,1.11,0,">1 nonsynonymous","W23E F44T G174W",3
"lib2","SARS-CoV-2","CTCCTCGGCCAAGAAG",7,120.97,10.93,0.09,0.05,2.91,1.09,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","CTCCTCGTAGCTAGTG",3,37.3,10.72,-0.12,0.07,2.98,1,0,">1 nonsynonymous","D90L E141D T201E",3
"lib2","SARS-CoV-2","CTCCTCTGGAACGGCG",3,14.91,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1V C61F N120I P169V S184A",5
"lib2","SARS-CoV-2","CTCCTCTTTTATTAAT",2,1.25,NA,NA,NA,NA,NA,NA,"stop","K26L Y66M S129* P149Q R179C K198Q",6
"lib2","SARS-CoV-2","CTCCTGAGCGGATACT",2,36.02,10.36,-0.47,0.05,2.88,1.02,0,">1 nonsynonymous","Y35R L122T",2
"lib2","SARS-CoV-2","CTCCTGATAATCCTAA",2,22.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R K128P P161R",3
"lib2","SARS-CoV-2","CTCCTGATGTTAACCG",16,541.64,10.67,-0.17,0.02,2.95,1.04,0,"1 nonsynonymous","N40Y",1
"lib2","SARS-CoV-2","CTCCTGCAATGTCATG",13,38.82,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44L T63M P82M V173Y",4
"lib2","SARS-CoV-2","CTCCTGGAGGGGTCAT",2,37.22,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V71L N92F A105V L122K",4
"lib2","SARS-CoV-2","CTCCTGTACGGGCGAA",5,62.78,10.7,-0.13,0.06,2.9,1.06,0,"1 nonsynonymous","P191C",1
"lib2","SARS-CoV-2","CTCCTGTCCCTCCAAA",2,5.59,6.81,-4.03,0.69,1.66,1.04,0.07,">1 nonsynonymous","F17P C49P",2
"lib2","SARS-CoV-2","CTCCTGTTCGTTCGAG",14,53.74,8.13,-2.71,0.33,1.5,1.12,0.04,">1 nonsynonymous","G9A D34H C49I N58S",4
"lib2","SARS-CoV-2","CTCCTTAATCCCGGCG",14,168.62,9.96,-0.87,0.05,2.25,1.05,0,">1 nonsynonymous","T3P A14C F134N",3
"lib2","SARS-CoV-2","CTCCTTAGTCATCATC",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S T85E P96L V103L V182Y",5
"lib2","SARS-CoV-2","CTCCTTATACATATCC",1,38.33,9.4,-1.43,0.25,1.65,1.02,0.03,">1 nonsynonymous","P7L Y39M D59M Y66H E141Q",5
"lib2","SARS-CoV-2","CTCCTTATCTATCAAT",1,13.67,10.8,-0.04,0.04,3,1,0,"1 nonsynonymous","L183I",1
"lib2","SARS-CoV-2","CTCCTTATCTCCATAC",3,76.08,8.24,-2.6,0.11,2.46,1.07,0,">1 nonsynonymous","V37N L57K L125R P149L",4
"lib2","SARS-CoV-2","CTCCTTATTATCACCC",1,55.1,9.36,-1.47,0.08,1.63,1.03,0,">1 nonsynonymous","F12L S36C L131M",3
"lib2","SARS-CoV-2","CTCCTTATTATGCAAA",1,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T140V T148F G152P",4
"lib2","SARS-CoV-2","CTCCTTCGCCTAAGAA",13,237.38,10.15,-0.68,0.03,2.67,1.07,0,">1 nonsynonymous","S41K T85M D90A",3
"lib2","SARS-CoV-2","CTCCTTGATTCACAAG",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I A42Y G83H Y121P",4
"lib2","SARS-CoV-2","CTCCTTGGATAATGGT",5,112.97,9.53,-1.3,0.05,2.89,1.11,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","CTCCTTGTGACTTTAG",2,31.07,10.31,-0.53,0.05,2.81,1.1,0,"1 nonsynonymous","G51D",1
"lib2","SARS-CoV-2","CTCCTTTAACCCTGCT",2,18.24,8.23,-2.61,0.32,1.5,1.18,0.03,">1 nonsynonymous","S36Y F62S Y91I",3
"lib2","SARS-CoV-2","CTCCTTTAAGAAGAGG",3,20.06,11.01,0.17,0.06,2.99,1.01,0,"1 nonsynonymous","E154R",1
"lib2","SARS-CoV-2","CTCCTTTAATCACAAG",4,8.53,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N64R A105K Y143V",3
"lib2","SARS-CoV-2","CTCCTTTTCAAGATTT",5,107.89,10.57,-0.26,0.03,2.96,1.02,0,"1 nonsynonymous","D59V",1
"lib2","SARS-CoV-2","CTCGAAAAAAACCAAT",6,100.86,10.81,-0.02,0.05,2.88,1.12,0,">1 nonsynonymous","L122I T201M",2
"lib2","SARS-CoV-2","CTCGAAAAATACAATT",9,60.24,9.99,-0.85,0.07,2.1,1,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","CTCGAAAATCAGCCAA",13,844.04,10.66,-0.17,0.02,2.97,1.04,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","CTCGAAACTATAGATC",12,68.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13Y I28K D68A",3
"lib2","SARS-CoV-2","CTCGAAACTCATTCGC",8,126.32,9.39,-1.45,0.03,2.88,1.09,0,">1 nonsynonymous","G51R N110I T170F",3
"lib2","SARS-CoV-2","CTCGAAAGTGTAATAA",6,68.29,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27W E141S N157I",3
"lib2","SARS-CoV-2","CTCGAAATAATCAATA",2,9.46,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N1I Y50E D90H",3
"lib2","SARS-CoV-2","CTCGAAATAGTACACC",4,20.34,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","K56P A89F N107F P149L P197G",5
"lib2","SARS-CoV-2","CTCGAAATATTCGAAA",2,59.28,10.45,-0.39,0.07,2.93,1.1,0,">1 nonsynonymous","K114M L122S Y178V",3
"lib2","SARS-CoV-2","CTCGAAATGCCATAAT",12,114.3,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S19P T140W S147C F167L",4
"lib2","SARS-CoV-2","CTCGAAATTCCTATAC",3,81.63,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35S D112S L188Q",3
"lib2","SARS-CoV-2","CTCGAAATTTCGAGTT",10,103.63,10.48,-0.35,0.07,2.85,1.06,0,">1 nonsynonymous","T3V A42S",2
"lib2","SARS-CoV-2","CTCGAACAAGACGAAC",4,69.78,10.89,0.06,0.05,2.95,1.06,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","CTCGAACCCACCGGAT",7,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T148L E186P",2
"lib2","SARS-CoV-2","CTCGAACCTAGGTACA",14,0.7,NA,NA,NA,NA,NA,NA,"stop","Y35T Y119I R179*",3
"lib2","SARS-CoV-2","CTCGAACTCGAAACAA",4,10.79,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","F47G N64P I104Y E141I V173G",5
"lib2","SARS-CoV-2","CTCGAAGTCTGGGCAA",4,33.95,9.23,-1.6,0.06,2,1.03,0,">1 nonsynonymous","D59R D90C P169L",3
"lib2","SARS-CoV-2","CTCGAATAATTCCAAA",5,27.99,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","R27T P82L R136N",3
"lib2","SARS-CoV-2","CTCGAATCAAACAACT",9,30.89,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","T3S W106R G117L E135S L188S",5
"lib2","SARS-CoV-2","CTCGAATCCTTTTATT",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y P82A",2
"lib2","SARS-CoV-2","CTCGAATGTCAATCAT",3,56.71,6.1,-4.74,1.33,1.5,1.32,0.04,">1 nonsynonymous","Y21T D97C N107C",3
"lib2","SARS-CoV-2","CTCGACACTTAAAGAA",1,2.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","CTCGACAGGAAAGTTG",7,101.44,10.37,-0.47,0.03,2.92,1.04,0,"1 nonsynonymous","Y91I",1
"lib2","SARS-CoV-2","CTCGACCCTCCAACTC",2,4.08,NA,NA,NA,NA,NA,NA,"stop","C6F A67S Y93L S113*",4
"lib2","SARS-CoV-2","CTCGACCGATACCCTG",11,37.63,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A14H D98S S113I G155H",4
"lib2","SARS-CoV-2","CTCGACCTTGAATACC",1,73.18,10.71,-0.13,0.07,2.89,1.13,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CTCGACGATATTCCTA",5,14.22,6.3,-4.53,0.94,1.5,1.25,0.06,">1 nonsynonymous","T3P Y93L G174D",3
"lib2","SARS-CoV-2","CTCGACGCCTGGATCC",22,66.34,6.32,-4.52,0.68,1.5,1.28,0.03,">1 nonsynonymous","P54D D90F I104R G116V V173R",5
"lib2","SARS-CoV-2","CTCGACGGTACACTGT",12,174.94,10.79,-0.05,0.04,2.87,1.13,0,"1 nonsynonymous","T85K",1
"lib2","SARS-CoV-2","CTCGACGTCAACCTTG",8,20.46,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F47Y N118R V180E G196K",4
"lib2","SARS-CoV-2","CTCGACGTCCGTACAA",5,7.74,6.15,-4.68,0.38,3,1.1,0,">1 nonsynonymous","C61R R73E D112L Y119L A145V",5
"lib2","SARS-CoV-2","CTCGACTACACAAAAA",13,59.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18T D112E T140C N157K",4
"lib2","SARS-CoV-2","CTCGACTATCGTGGTA",9,89.34,6.27,-4.56,0.81,1.5,1.18,0.03,">1 nonsynonymous","I80M Y91R K198M",3
"lib2","SARS-CoV-2","CTCGAGAAAATGACAC",4,14.65,6,-4.84,2,3,1.19,0.04,">1 nonsynonymous","L5R T55N C61I D68T N92W T100I",6
"lib2","SARS-CoV-2","CTCGAGACATCATATC",5,79.2,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61T N92V D137H",3
"lib2","SARS-CoV-2","CTCGAGCTAGAACAAC",3,36.37,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","V20D C61M K87A D137R S147L G172R S200L",7
"lib2","SARS-CoV-2","CTCGAGCTTCTTCGCA",2,44.27,10.82,-0.02,0.06,3,1.01,0,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","CTCGAGGAATGAAGCA",3,167.09,10.13,-0.71,0.03,2.79,1.06,0,">1 nonsynonymous","L57H N120E I142V",3
"lib2","SARS-CoV-2","CTCGAGGATGCAATAA",6,97.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10S R27M R127E A145E P149V F167S N171E S184V",8
"lib2","SARS-CoV-2","CTCGAGGCCGATCGAT",4,170.05,9.84,-1,0.04,2.87,1.05,0,">1 nonsynonymous","Q176H A192L",2
"lib2","SARS-CoV-2","CTCGAGGTCTGAACTT",9,80.44,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K26T L38S D137F",3
"lib2","SARS-CoV-2","CTCGAGTGCAATTTTA",6,0.11,NA,NA,NA,NA,NA,NA,"stop","Y50S Q168*",2
"lib2","SARS-CoV-2","CTCGAGTGCTTATAGC",17,623.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39R F70S Q176V",3
"lib2","SARS-CoV-2","CTCGAGTGTATTGGGG",6,62.6,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K26L V37L K48S G86A I138T L162M",6
"lib2","SARS-CoV-2","CTCGATAAATGAACAA",2,31.57,10.57,-0.27,0.03,2.95,1.05,0,">1 nonsynonymous","A18T F62I",2
"lib2","SARS-CoV-2","CTCGATAGTTTCGCTT",6,79.44,10.29,-0.55,0.04,2.9,1.07,0,"1 nonsynonymous","Y91H",1
"lib2","SARS-CoV-2","CTCGATATTTTTCGAC",1,45.51,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1I T46D S69L G74I D90T",5
"lib2","SARS-CoV-2","CTCGATCCACTGAATA",5,1.16,NA,NA,NA,NA,NA,NA,"stop","Y91* F185T",2
"lib2","SARS-CoV-2","CTCGATGCCATTAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F8T Y123*",2
"lib2","SARS-CoV-2","CTCGATTACGCCACGC",9,60.38,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","V11S K114M L183C",3
"lib2","SARS-CoV-2","CTCGCAAAAATCCGTA",8,60.75,9.56,-1.28,0.05,2.69,1.08,0,">1 nonsynonymous","F8Q K87I",2
"lib2","SARS-CoV-2","CTCGCAAAATTTAGCG",5,0.28,NA,NA,NA,NA,NA,NA,"stop","K94Q N107* T140L T201H",4
"lib2","SARS-CoV-2","CTCGCAAACCAGGTTT",3,46.88,8.38,-2.46,0.1,2.07,1.13,0,">1 nonsynonymous","C61L K87S N151K G155W",4
"lib2","SARS-CoV-2","CTCGCAAATCGTACGA",6,1.49,NA,NA,NA,NA,NA,NA,"stop","S43R G86L Y93H G146* Y178A",5
"lib2","SARS-CoV-2","CTCGCAACACTTCTCG",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L G51T",2
"lib2","SARS-CoV-2","CTCGCAATCTTAATTA",2,19.68,10.72,-0.11,0.05,2.98,1,0,"1 nonsynonymous","P169R",1
"lib2","SARS-CoV-2","CTCGCACAAGAAACCA",4,34.21,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S45A P96H Q144V",3
"lib2","SARS-CoV-2","CTCGCACACATTCAAG",9,112.77,6.37,-4.46,0.21,1.5,1.09,0,">1 nonsynonymous","S36G L122Y Y143R G174K",4
"lib2","SARS-CoV-2","CTCGCACACCTTTAGA",10,111.88,10.04,-0.79,0.05,2.46,1.07,0,">1 nonsynonymous","D90H D98G",2
"lib2","SARS-CoV-2","CTCGCACCCCTCGAAA",1,5.28,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","R73K A105E S113I C158F P177Q",5
"lib2","SARS-CoV-2","CTCGCACCTAATATGT",5,2.49,NA,NA,NA,NA,NA,NA,"stop","L5A D34G S43R A89R Y123T G152*",6
"lib2","SARS-CoV-2","CTCGCAGGAAATTCTA",6,90.32,10.84,0.01,0.05,2.93,1.08,0,"1 nonsynonymous","I138V",1
"lib2","SARS-CoV-2","CTCGCAGTAATCGCCT",3,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S P161R",2
"lib2","SARS-CoV-2","CTCGCATTTCTCCTAA",2,27.84,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V11N G51A E141T",3
"lib2","SARS-CoV-2","CTCGCCAAAACAATGC",4,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L K87Q Q163Y Y178N S200T",5
"lib2","SARS-CoV-2","CTCGCCAAAGAGCCAA",3,45.53,10.58,-0.26,0.03,2.97,1.01,0,">1 nonsynonymous","Y66T A105T",2
"lib2","SARS-CoV-2","CTCGCCAACAAGAAAC",3,34.69,6.89,-3.95,0.51,1.5,1.07,0.05,">1 nonsynonymous","A33H C49G T140V N171L G196W",5
"lib2","SARS-CoV-2","CTCGCCAGTCATATCT",1,6.91,10,-0.84,0.36,2.55,1,0.01,">1 nonsynonymous","A105Y T140S",2
"lib2","SARS-CoV-2","CTCGCCCCCTTCCATT",8,53.09,10.8,-0.03,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGCCCGAAATCAAG",15,158.91,10.33,-0.51,0.03,2.98,1.03,0,">1 nonsynonymous","R78Q G116R G152D",3
"lib2","SARS-CoV-2","CTCGCCTGCACATTAG",22,103.29,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","A33S T85S D90L F99T N151I K199S",6
"lib2","SARS-CoV-2","CTCGCGATACCAATTA",6,32.75,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","R25D N58T A67Y",3
"lib2","SARS-CoV-2","CTCGCGATCACATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D D90P",2
"lib2","SARS-CoV-2","CTCGCGCACATTAACT",19,781.1,10.83,-0.01,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGCGTCATTGCAAT",6,33.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10T D68W P96R N151K Q163C Q168C",6
"lib2","SARS-CoV-2","CTCGCGTGATGAACTA",3,57.25,10.86,0.03,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGCGTGCCTGTGAC",2,43.87,9.03,-1.81,0.19,1.6,1.06,0.01,">1 nonsynonymous","F12G P149R",2
"lib2","SARS-CoV-2","CTCGCGTGGACAAGGG",5,104.06,10.56,-0.27,0.05,2.89,1.11,0,">1 nonsynonymous","K87F I142L",2
"lib2","SARS-CoV-2","CTCGCGTTCCCATTCT",1,15.69,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","F8G L95R S200R",3
"lib2","SARS-CoV-2","CTCGCTACCCCAATTC",4,104.19,9.05,-1.79,0.03,2.89,1.12,0,">1 nonsynonymous","A42R G174I",2
"lib2","SARS-CoV-2","CTCGCTAGCACACCAC",12,89.4,10.15,-0.69,0.06,2.65,1.05,0,">1 nonsynonymous","T3V D34H",2
"lib2","SARS-CoV-2","CTCGCTAGGAAACACT",4,444.11,8.57,-2.27,0.07,2.56,1.04,0,">1 nonsynonymous","N13L Y159F G196K",3
"lib2","SARS-CoV-2","CTCGCTCACAACATAT",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W S19Y F134I G152I",4
"lib2","SARS-CoV-2","CTCGCTCAGAACACAA",22,211.84,8.83,-2.01,0.08,2.48,1.08,0,">1 nonsynonymous","I28F C61F F167L",3
"lib2","SARS-CoV-2","CTCGCTCAGTACCCCC",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S E10G D68E S200W",4
"lib2","SARS-CoV-2","CTCGCTCTGACGTATT",3,3.47,NA,NA,NA,NA,NA,NA,"stop","F17* V71P K114Y",3
"lib2","SARS-CoV-2","CTCGGAAAATCCTGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* G152W",2
"lib2","SARS-CoV-2","CTCGGACAAAAGTAAG",12,133.55,9.81,-1.03,0.07,2.22,1.02,0,">1 nonsynonymous","F44T D90H",2
"lib2","SARS-CoV-2","CTCGGACGGGAGATAT",2,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C K56I I88L N118P",4
"lib2","SARS-CoV-2","CTCGGAGGTGCTGGAA",23,400.57,9.99,-0.85,0.06,2.52,1.07,0,">1 nonsynonymous","Y91V D97N T201R",3
"lib2","SARS-CoV-2","CTCGGCAGGCTCTGAT",8,71.96,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A22L K48R S69E W106M Y143T",5
"lib2","SARS-CoV-2","CTCGGCATAAATAAGA",13,66.11,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5A L95R G152L",3
"lib2","SARS-CoV-2","CTCGGCTGGATTCCAG",4,31.66,9.93,-0.91,0.05,2.94,1.06,0,">1 nonsynonymous","K56M L125V",2
"lib2","SARS-CoV-2","CTCGGGAAACACTAAT",6,120.1,10.64,-0.19,0.03,2.95,1.01,0,">1 nonsynonymous","I2Q Y91N",2
"lib2","SARS-CoV-2","CTCGGGATAGATGAAA",8,21.77,10.67,-0.16,0.06,2.83,1.17,0,">1 nonsynonymous","T3E N120Y",2
"lib2","SARS-CoV-2","CTCGGGCGTGTTTAGG",1,48.3,10.62,-0.21,0.06,2.86,1.1,0,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","CTCGGGGAAGATCTTA",2,18.25,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V37S S69V Y119A D137R",4
"lib2","SARS-CoV-2","CTCGGGGATGCATAAG",14,139.22,9.01,-1.83,0.05,2.87,1.09,0,">1 nonsynonymous","Y119S G152C",2
"lib2","SARS-CoV-2","CTCGGGTACCTAGCCT",3,39.6,10.49,-0.35,0.04,2.99,1.03,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","CTCGGGTTAAAGAAAA",6,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A E141L",2
"lib2","SARS-CoV-2","CTCGGGTTTGGCCTAA",2,19.07,10.86,0.02,0.07,2.98,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGGTAAGGTGTGAG",11,76.58,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","A14L V65E Y119K F156H",4
"lib2","SARS-CoV-2","CTCGGTCCATGAAGAG",4,8.72,10.85,0.01,0.08,2.75,1.28,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGGTTCACCGCGTG",1,60.06,10.08,-0.76,0.07,2.74,1.03,0,">1 nonsynonymous","F62I G83V",2
"lib2","SARS-CoV-2","CTCGGTTGGAATTGAA",15,232.04,10.91,0.08,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCGTAAAGTCGTAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L E135K D137M",3
"lib2","SARS-CoV-2","CTCGTAACCCCTGCTA",6,126.75,10.28,-0.55,0.03,2.82,1.04,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","CTCGTAACGGCATGCT",1,46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L38Q V103L P161Q",3
"lib2","SARS-CoV-2","CTCGTAATGTAACTCA",4,76.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K56V T100D G116V G152F",4
"lib2","SARS-CoV-2","CTCGTACAACTATAAA",9,42.41,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T15R W23T D59L Q144S P149S K198A",6
"lib2","SARS-CoV-2","CTCGTACCACCCAACC",26,226.98,10.44,-0.39,0.03,2.91,1.07,0,">1 nonsynonymous","Q84G Y123S N130Y",3
"lib2","SARS-CoV-2","CTCGTACGTCTTAATG",1,37.96,9.74,-1.1,0.04,2.92,1.04,0,">1 nonsynonymous","F62T T170H",2
"lib2","SARS-CoV-2","CTCGTAGAGACTAGCA",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L K87S K114L C158W S184P K198L",6
"lib2","SARS-CoV-2","CTCGTAGATTATGCAA",5,1.29,NA,NA,NA,NA,NA,NA,"stop","A81* P149S C158P",3
"lib2","SARS-CoV-2","CTCGTATAATATTCCC",2,48.16,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P54R G83W G116Y S147I Y175C",5
"lib2","SARS-CoV-2","CTCGTATGAATTGATA",3,0.44,NA,NA,NA,NA,NA,NA,"stop","I2S Y93R N118R T148*",4
"lib2","SARS-CoV-2","CTCGTCAAGAGTATTA",4,65.14,10.25,-0.58,0.03,2.94,1.02,0,">1 nonsynonymous","C61D D90H",2
"lib2","SARS-CoV-2","CTCGTCACTAGCTCTC",9,27.18,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y66T I104R",2
"lib2","SARS-CoV-2","CTCGTCATATCGGGTA",1,21.82,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I28V N58L Y93G N130R",4
"lib2","SARS-CoV-2","CTCGTCCCACCACGTA",7,125.52,10.75,-0.09,0.03,2.97,1.05,0,">1 nonsynonymous","D59A S139T",2
"lib2","SARS-CoV-2","CTCGTCTAACTGATTA",6,54.19,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C102Y Q168I",2
"lib2","SARS-CoV-2","CTCGTGACGAAAAGAT",4,22.49,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D98Y R127G C150L V173D S200D",5
"lib2","SARS-CoV-2","CTCGTGGTTAGGTGAT",4,15.65,9.08,-1.76,0.26,1.83,1.07,0.03,">1 nonsynonymous","F12N T55W",2
"lib2","SARS-CoV-2","CTCGTTAAACCGATCG",9,29.85,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A81L K94N A105V Y121F",4
"lib2","SARS-CoV-2","CTCGTTAAAGTAAAGT",3,23.79,9.1,-1.73,0.12,1.82,1.11,0.01,">1 nonsynonymous","F47Y T100Y G116E E186I",4
"lib2","SARS-CoV-2","CTCGTTAACCTAATGT",4,58.14,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","F47I K56V G101F G146F L183S K199V",6
"lib2","SARS-CoV-2","CTCGTTACTTAATATA",2,16.02,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","F62A W106M S139R C150F S164T",5
"lib2","SARS-CoV-2","CTCGTTAGAAATTTAA",4,21.09,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V11P Y91R A105N Q144L",4
"lib2","SARS-CoV-2","CTCGTTCAAACTGGAC",1,50.55,9.91,-0.92,0.06,2.11,1,0,">1 nonsynonymous","N1A W106L",2
"lib2","SARS-CoV-2","CTCGTTCCATTTTAAG",7,136.57,10.4,-0.43,0.05,2.92,1.05,0,">1 nonsynonymous","N58C G83H",2
"lib2","SARS-CoV-2","CTCGTTCTCCCTCATA",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W G86R",2
"lib2","SARS-CoV-2","CTCGTTGACAGTTAAA",3,33.44,6.13,-4.7,0.59,1.5,1.07,0.01,">1 nonsynonymous","F44T F99L F167L",3
"lib2","SARS-CoV-2","CTCGTTGACCACACCC",2,26.21,6.12,-4.72,0.79,1.5,1.16,0.01,">1 nonsynonymous","L60W D98P Y175R",3
"lib2","SARS-CoV-2","CTCGTTGGGTCCGGTT",8,76.39,10.58,-0.25,0.05,2.88,1.14,0,">1 nonsynonymous","C61P G83Y S200K",3
"lib2","SARS-CoV-2","CTCGTTTAATCCAGAT",2,28.29,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4P A14S C158S",3
"lib2","SARS-CoV-2","CTCGTTTCGGCGAATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54A A105Y",2
"lib2","SARS-CoV-2","CTCGTTTGACCTAAAA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","W106Y E135W Q163* T170Y P197T",5
"lib2","SARS-CoV-2","CTCGTTTGGTACATGC",1,6.99,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T63Y P177W",2
"lib2","SARS-CoV-2","CTCTAAAAATCACTCA",6,160.58,9.89,-0.95,0.03,2.87,1.05,0,">1 nonsynonymous","A89S P169L",2
"lib2","SARS-CoV-2","CTCTAAAACACCACAA",5,52.54,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L95V N107Q S139N S147L F156L",5
"lib2","SARS-CoV-2","CTCTAAAATACTGGCC",8,131.7,10.6,-0.23,0.03,2.97,1.03,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","CTCTAAAATCTCAAAA",1,19.2,10.82,-0.02,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTAAACAGACTAAT",2,0.38,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","CTCTAAACATTAAATA",14,8.76,NA,NA,NA,NA,NA,NA,"stop","S36W S43A C61S I80* D98C Y143* T201M",7
"lib2","SARS-CoV-2","CTCTAAACGTTGTCCC",9,55.5,6,-4.83,1,1.5,1.16,0.01,">1 nonsynonymous","A14S N58F G86I L122S G152L",5
"lib2","SARS-CoV-2","CTCTAAACTGAGCCAT",1,16.96,7.16,-3.67,0.31,1.5,1.07,0.03,">1 nonsynonymous","I2L W106S G146R",3
"lib2","SARS-CoV-2","CTCTAAAGGTCAAACG",3,26.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H C49I T85V D112F I142G T201D",6
"lib2","SARS-CoV-2","CTCTAAATTAGAAAAA",2,7.18,8.96,-1.88,0.13,1.8,1.1,0.01,">1 nonsynonymous","G9Y D90Y G146W",3
"lib2","SARS-CoV-2","CTCTAACAATACGAGA",10,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I T100N K199W",3
"lib2","SARS-CoV-2","CTCTAACAGACAATAG",3,50.68,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N40D Y50T D90P",3
"lib2","SARS-CoV-2","CTCTAACCATCCTCAT",7,1.82,NA,NA,NA,NA,NA,NA,"stop","G51S T100A V103M S147*",4
"lib2","SARS-CoV-2","CTCTAACCGAAAATAA",9,57.79,9.57,-1.26,0.1,1.76,1.07,0,">1 nonsynonymous","F99M V103I",2
"lib2","SARS-CoV-2","CTCTAACCTGAATCCA",5,35.24,9.52,-1.32,0.15,1.54,1.08,0.01,">1 nonsynonymous","P82L S184I H189Y P197A",4
"lib2","SARS-CoV-2","CTCTAAGAAGGCTTAA",1,27.6,6.07,-4.76,1.35,1.65,1.24,0.02,">1 nonsynonymous","I2Y A14D T55L F167P",4
"lib2","SARS-CoV-2","CTCTAAGATTGTTCAT",3,32.03,9.89,-0.95,0.08,2.83,1.02,0,">1 nonsynonymous","A14I C61N N120F",3
"lib2","SARS-CoV-2","CTCTAAGTAAATGAGG",8,11.62,6.85,-3.99,0.51,1.5,1.18,0.05,">1 nonsynonymous","V77A N130T E186I",3
"lib2","SARS-CoV-2","CTCTAAGTCTACCTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R G174C",2
"lib2","SARS-CoV-2","CTCTAAGTTTGCCGTA",3,55.96,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A81V N120E Q144L C150V",4
"lib2","SARS-CoV-2","CTCTAATCAAATAACC",5,64.65,10.75,-0.09,0.03,2.91,1.1,0,"1 nonsynonymous","T140Y",1
"lib2","SARS-CoV-2","CTCTAATCAGCTGATA",5,0.19,NA,NA,NA,NA,NA,NA,"stop","K26H K94E N120*",3
"lib2","SARS-CoV-2","CTCTAATCCACACCTT",1,5.48,10.79,-0.05,0.05,3,1.01,0,"1 nonsynonymous","L122C",1
"lib2","SARS-CoV-2","CTCTAATGGGGCTTTC",12,6.99,NA,NA,NA,NA,NA,NA,"stop","Y35* N64V I88W S184D",4
"lib2","SARS-CoV-2","CTCTAATTAGTCGGCC",4,39.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39S F62Y I104A Y119V Y178C",5
"lib2","SARS-CoV-2","CTCTACAAATGTATGA",8,17.42,9.83,-1.01,0.16,2.12,1.04,0.01,">1 nonsynonymous","F99V S200M",2
"lib2","SARS-CoV-2","CTCTACAATTAGAAGC",2,27.72,9.84,-1,0.14,2.34,1.08,0.01,">1 nonsynonymous","G9K G86S D97V P197I",4
"lib2","SARS-CoV-2","CTCTACACAACGCTAG",4,0.54,NA,NA,NA,NA,NA,NA,"stop","R16D S43A L57* F70V",4
"lib2","SARS-CoV-2","CTCTACACAACGCTTT",5,34.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10S T15F N30A F99T",4
"lib2","SARS-CoV-2","CTCTACACAGCGACCA",4,46.26,8.98,-1.86,0.06,1.99,1.06,0,">1 nonsynonymous","I28T T55C",2
"lib2","SARS-CoV-2","CTCTACAGTCAATGTA",1,0.93,NA,NA,NA,NA,NA,NA,"stop","C61S Q84* T170M",3
"lib2","SARS-CoV-2","CTCTACATTTAAAAGT",8,137.68,10.76,-0.08,0.03,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTACCAACAATTCA",7,0.86,NA,NA,NA,NA,NA,NA,"stop","C49H L57* Y175G",3
"lib2","SARS-CoV-2","CTCTACCACTCCGAGT",4,184.86,10.24,-0.6,0.03,2.84,1.03,0,">1 nonsynonymous","A14T L38I",2
"lib2","SARS-CoV-2","CTCTACCCACAGGAAC",11,18.84,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42C I88V W106L G116N A190Y K198M",6
"lib2","SARS-CoV-2","CTCTACCCTTTACCAA",3,49,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","E10D G116W Q176P K199V",4
"lib2","SARS-CoV-2","CTCTACCTAGAAGAAA",1,28.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5A A14P F62S L95F P177S",5
"lib2","SARS-CoV-2","CTCTACGAAAAAAAGT",13,192.87,6,-4.84,1.46,1.5,1.14,0.01,">1 nonsynonymous","T55S S113Y R127P",3
"lib2","SARS-CoV-2","CTCTACGAAAAATGCG",10,78.98,6,-4.84,1.16,1.5,1.21,0.02,">1 nonsynonymous","K26V T55Q V65R N118S P161A",5
"lib2","SARS-CoV-2","CTCTACGAATCAAGAT",1,14.38,8.76,-2.08,0.14,2.23,1.03,0.01,">1 nonsynonymous","S41D G51R D90V G174H",4
"lib2","SARS-CoV-2","CTCTACGCCATGGAAT",2,85.62,10.85,0.02,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTACGTTAAACCCA",1,1.58,NA,NA,NA,NA,NA,NA,"stop","F12* G155H C195L",3
"lib2","SARS-CoV-2","CTCTACTATAACGTCC",8,213.82,9.72,-1.12,0.07,2.06,1.05,0,">1 nonsynonymous","K94Y A192S",2
"lib2","SARS-CoV-2","CTCTACTTGGGTTAGG",9,71,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I88E P149Y F167A",3
"lib2","SARS-CoV-2","CTCTAGAAACAGTGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q L38T P161F K198Q",4
"lib2","SARS-CoV-2","CTCTAGAAGCATGATG",2,8.84,11.14,0.3,0.06,3,1,0,"1 nonsynonymous","S36Q",1
"lib2","SARS-CoV-2","CTCTAGAAGCCGATAT",2,26.14,8.79,-2.05,0.08,2.94,1.06,0,">1 nonsynonymous","I104V I138R G166R S200R",4
"lib2","SARS-CoV-2","CTCTAGAGTCGAGAGG",8,58.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105C L183R",2
"lib2","SARS-CoV-2","CTCTAGATATTGAGAA",10,3,NA,NA,NA,NA,NA,NA,"stop","G9* K56A C61V P82D",4
"lib2","SARS-CoV-2","CTCTAGATTCGTTTCA",7,68.06,10.59,-0.24,0.05,2.82,1.1,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","CTCTAGATTGTCTAAA",1,44.43,6.86,-3.98,0.18,1.76,1.09,0.01,"1 nonsynonymous","C150W",1
"lib2","SARS-CoV-2","CTCTAGCCCGAAGTGG",3,1.51,NA,NA,NA,NA,NA,NA,"stop","N40I K56Q N107* I138C",4
"lib2","SARS-CoV-2","CTCTAGGATACAAGCC",1,139.62,9.31,-1.53,0.06,2.68,1.06,0,">1 nonsynonymous","F44N D59L",2
"lib2","SARS-CoV-2","CTCTAGGCAATGCCTG",3,26.84,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N30M P96S W106V D112Y P149H",5
"lib2","SARS-CoV-2","CTCTAGGCCTAGCCCT",7,3.76,NA,NA,NA,NA,NA,NA,"stop","R16* E135I G155C T201R",4
"lib2","SARS-CoV-2","CTCTAGGGATAAGGGC",7,38.76,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","F47S K56C A81G F126S",4
"lib2","SARS-CoV-2","CTCTAGTAGAAATTCG",3,0.11,NA,NA,NA,NA,NA,NA,"stop","R73N F134G F167L S200*",4
"lib2","SARS-CoV-2","CTCTAGTCGGAAAAGT",1,7.22,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Q163K V182H",2
"lib2","SARS-CoV-2","CTCTAGTTGATCTGGT",3,102.05,9.46,-1.37,0.05,2.8,1.08,0,">1 nonsynonymous","A14R C61A K87N N120L N151K",5
"lib2","SARS-CoV-2","CTCTATAAAGCTCCGA",2,24.9,9.37,-1.46,0.16,1.84,1.07,0.01,">1 nonsynonymous","L60S G83S I104T",3
"lib2","SARS-CoV-2","CTCTATAAAGGGATTT",9,7.39,NA,NA,NA,NA,NA,NA,"stop","K26M W106* I138F",3
"lib2","SARS-CoV-2","CTCTATAACCAAAGCT",5,71.56,10.82,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTATAAGGATAAAC",2,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K A33Q G117Y V153C",4
"lib2","SARS-CoV-2","CTCTATAATTTTAGAT",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L F44D V103T",3
"lib2","SARS-CoV-2","CTCTATACTAGTATGC",3,42.15,9.49,-1.34,0.1,2.8,1.05,0,">1 nonsynonymous","F8L V37W K114L A145C",4
"lib2","SARS-CoV-2","CTCTATATAAGTCCTT",5,23.02,9.98,-0.86,0.13,2.03,1.08,0.02,">1 nonsynonymous","A14D A42L K56S E141P",4
"lib2","SARS-CoV-2","CTCTATATAGGTAGCA",7,79.32,10.11,-0.72,0.03,2.76,1.04,0,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","CTCTATATCGCAAGAC",2,0.77,NA,NA,NA,NA,NA,NA,"stop","I28G V65* G117E S129G",4
"lib2","SARS-CoV-2","CTCTATCAAAAATATG",12,173.15,10.79,-0.05,0.03,2.94,1.07,0,"1 nonsynonymous","N151Q",1
"lib2","SARS-CoV-2","CTCTATCATACAACAC",7,40.65,10.77,-0.07,0.06,2.95,1.04,0,">1 nonsynonymous","T85G P149Q",2
"lib2","SARS-CoV-2","CTCTATCATGTACCCC",1,22.75,10.3,-0.54,0.09,2.81,1,0,">1 nonsynonymous","D34V L60F S129R",3
"lib2","SARS-CoV-2","CTCTATGTGAAAATTA",17,110.08,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","CTCTATTAACTCCCAC",3,53.65,10.8,-0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTATTAATGTGATC",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59S P96F F99A",3
"lib2","SARS-CoV-2","CTCTATTACCTAAGTG",3,36,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A81D Y119T G152C",3
"lib2","SARS-CoV-2","CTCTATTCCTATATCT",6,93.07,10.45,-0.38,0.05,2.95,1.05,0,">1 nonsynonymous","L5F R16C P149R",3
"lib2","SARS-CoV-2","CTCTATTCGACACCGA",3,70.54,10.63,-0.2,0.05,2.84,1.11,0,">1 nonsynonymous","L38F K114T",2
"lib2","SARS-CoV-2","CTCTATTCGTAACGTT",3,78.62,10.69,-0.15,0.05,2.83,1.16,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","CTCTCAAAAAAAGGGT",10,162,10.76,-0.07,0.03,2.97,1.04,0,"1 nonsynonymous","S36W",1
"lib2","SARS-CoV-2","CTCTCAAAACAAAGCT",3,49.86,10.89,0.06,0.11,2.88,1.07,0,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","CTCTCAAACAGTAGGG",4,110.91,10.82,-0.02,0.04,2.94,1.08,0,">1 nonsynonymous","L5V Y35M",2
"lib2","SARS-CoV-2","CTCTCAAAGCATCATG",14,2.04,NA,NA,NA,NA,NA,NA,"stop","S41* G83V N107*",3
"lib2","SARS-CoV-2","CTCTCAAATTAACCTA",3,20.45,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S19W F62I I88V G155C",4
"lib2","SARS-CoV-2","CTCTCAACGGGACTGA",3,23.59,10.76,-0.07,0.05,3,1.02,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","CTCTCAACTCATAACA",4,25.83,10.57,-0.27,0.05,3,1,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","CTCTCAAGGGGATTAT",10,147.24,10.68,-0.16,0.03,2.97,1.06,0,">1 nonsynonymous","C61L G196A",2
"lib2","SARS-CoV-2","CTCTCAAGTCGGCCCT",8,44.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49T L60K F99L F156N Y165V L187S",6
"lib2","SARS-CoV-2","CTCTCAATCCCTCCTT",1,11.55,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","I28Q Y35N Y91F F99A V103R F126V G166D",7
"lib2","SARS-CoV-2","CTCTCAATGTATTACG",4,5.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F17L T55K Y121H",3
"lib2","SARS-CoV-2","CTCTCAATTATACGCA",7,108.99,9.54,-1.29,0.06,1.89,1.08,0,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","CTCTCACAGATTGTCG",5,61.87,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","I28K A105Y",2
"lib2","SARS-CoV-2","CTCTCACCAGCGATAA",1,31.79,10.13,-0.7,0.12,2.39,1.06,0.01,">1 nonsynonymous","F99L N110S",2
"lib2","SARS-CoV-2","CTCTCACGCGTAAGTA",12,2.5,NA,NA,NA,NA,NA,NA,"stop","D68V T85* I104K",3
"lib2","SARS-CoV-2","CTCTCACTAGGTCAAA",14,90.44,10.69,-0.14,0.05,2.91,1.09,0,"1 nonsynonymous","R16C",1
"lib2","SARS-CoV-2","CTCTCAGCCAGACTAC",2,0.07,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","CTCTCATAAGGCAAGC",1,23.99,10.56,-0.28,0.08,2.95,1.06,0,"1 nonsynonymous","F134C",1
"lib2","SARS-CoV-2","CTCTCATTGAGCGTTC",1,2.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63A",1
"lib2","SARS-CoV-2","CTCTCATTTTATAATG",5,81.52,9.85,-0.98,0.07,2.21,1.04,0,">1 nonsynonymous","G9S L95T",2
"lib2","SARS-CoV-2","CTCTCCACAAGGAGAG",1,5.45,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","F8N D90N G172K K198Q T201S",5
"lib2","SARS-CoV-2","CTCTCCATACTCCCAT",5,55.02,10.43,-0.4,0.05,2.87,1.04,0,"1 nonsynonymous","A14I",1
"lib2","SARS-CoV-2","CTCTCCCAAACACTAC",1,86.73,10.24,-0.6,0.05,2.99,1.05,0,"1 nonsynonymous","N171C",1
"lib2","SARS-CoV-2","CTCTCCCATTACGGGC",3,64.06,8.1,-2.74,0.1,1.82,1.07,0,">1 nonsynonymous","K56S D98W I142D",3
"lib2","SARS-CoV-2","CTCTCCCATTGGAGAC",16,230.8,10.71,-0.13,0.04,2.96,1.05,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","CTCTCCCTGCCGACGA",2,139.61,10.64,-0.19,0.04,2.97,1.03,0,"1 nonsynonymous","F160C",1
"lib2","SARS-CoV-2","CTCTCCGACGGATCCA",5,32.67,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A14S T55G V181R",3
"lib2","SARS-CoV-2","CTCTCCTGGACTCAGG",5,66.85,9.86,-0.98,0.06,2.12,1.1,0,">1 nonsynonymous","N1R K48H K94N",3
"lib2","SARS-CoV-2","CTCTCCTTAGCACTAA",7,78.68,6,-4.84,1.21,1.5,1.19,0.02,">1 nonsynonymous","N30S T46N S53F Y119V",4
"lib2","SARS-CoV-2","CTCTCCTTCGTATGAG",1,6.36,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","W23Q D90K P96K",3
"lib2","SARS-CoV-2","CTCTCCTTTAGATTAA",11,71.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7Q D59F T100P F167A",4
"lib2","SARS-CoV-2","CTCTCGAAAAGGCTGA",2,20.63,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","C31A S41R I72C V181S",4
"lib2","SARS-CoV-2","CTCTCGACAAAATTTG",5,114.13,9.7,-1.14,0.04,2.9,1.04,0,">1 nonsynonymous","I142N T201L",2
"lib2","SARS-CoV-2","CTCTCGACACATGAAT",3,15.94,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","D68E K128A G152I Q176W E186Y",5
"lib2","SARS-CoV-2","CTCTCGATCCAAGGAC",6,15.4,10.39,-0.45,0.07,3,1.01,0,">1 nonsynonymous","G9K C61N Y143H",3
"lib2","SARS-CoV-2","CTCTCGCAATCCGCAT",2,43.59,10.77,-0.07,0.04,2.91,1.06,0,">1 nonsynonymous","A42V G83F",2
"lib2","SARS-CoV-2","CTCTCGCACAGGATTT",1,13.5,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","D90S Y121N D137L G146L",4
"lib2","SARS-CoV-2","CTCTCGCCACATGAGT",4,9.96,8.89,-1.94,0.33,1.5,1,0.06,">1 nonsynonymous","T3M F44R G116R S184L",4
"lib2","SARS-CoV-2","CTCTCGCGGCAGGGTA",2,46.35,10.6,-0.24,0.06,2.93,1.04,0,"1 nonsynonymous","I104C",1
"lib2","SARS-CoV-2","CTCTCGCTAAACCAGC",1,28.6,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C49L Y91Q",2
"lib2","SARS-CoV-2","CTCTCGGAACAGATTG",6,2.46,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTCTCGGTACCTATCT",2,87.12,11.26,0.43,0.05,2.91,1.07,0,">1 nonsynonymous","N171F S200L",2
"lib2","SARS-CoV-2","CTCTCGTGGGATAATC",6,64.19,10.3,-0.54,0.04,2.79,1.04,0,">1 nonsynonymous","V71L L122R E154D",3
"lib2","SARS-CoV-2","CTCTCGTGGTTGCTCC",3,8.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5K I28R D90N F99M",4
"lib2","SARS-CoV-2","CTCTCGTTACATAAAT",10,44.38,8.87,-1.97,0.14,1.53,1.2,0.01,">1 nonsynonymous","V65Q F126L K132I",3
"lib2","SARS-CoV-2","CTCTCTAAACCAACAG",3,53.12,10.42,-0.42,0.04,2.85,1.05,0,">1 nonsynonymous","N13E D90N",2
"lib2","SARS-CoV-2","CTCTCTAATAAAAGCT",4,29.92,10.94,0.1,0.08,2.91,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTCTACAGGAAAAC",8,39,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N13V L60R E76L C150F N157L",5
"lib2","SARS-CoV-2","CTCTCTACCAGATATA",16,175.43,10.82,-0.01,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTCTATACCTCAGC",13,1.08,NA,NA,NA,NA,NA,NA,"stop","A89L K94E T148*",3
"lib2","SARS-CoV-2","CTCTCTCACGATATAC",13,5.69,NA,NA,NA,NA,NA,NA,"stop","L5N S43I Q84* N118V E154N",5
"lib2","SARS-CoV-2","CTCTCTCTTCAAGTGG",8,59.71,6.42,-4.42,0.59,1.5,1.22,0.02,"1 nonsynonymous","F99P",1
"lib2","SARS-CoV-2","CTCTCTGAAACAGACA",4,70.12,10.76,-0.07,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTCTGAGTAAGATT",5,52.62,10.15,-0.69,0.16,2.16,1.08,0.01,">1 nonsynonymous","F12R D90N P197V",3
"lib2","SARS-CoV-2","CTCTCTGCGCTACCAG",15,83.81,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S53Q F70I I88L T201R",4
"lib2","SARS-CoV-2","CTCTCTGGGAAAACCG",4,50.35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30C V182E",2
"lib2","SARS-CoV-2","CTCTCTGTAAAATCGG",5,50.88,10.83,-0.01,0.06,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTCTGTATGGCACT",16,260.26,10.74,-0.09,0.03,2.95,1.05,0,"1 nonsynonymous","F134M",1
"lib2","SARS-CoV-2","CTCTCTTACTAGACGA",3,33.66,6,-4.84,2,1.5,1.17,0.08,">1 nonsynonymous","N13T S19G P177A P197T T201D",5
"lib2","SARS-CoV-2","CTCTCTTTACCAGTAC",12,107.12,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S29D S36A G86R K94F C102N Y119D",6
"lib2","SARS-CoV-2","CTCTGAAAATACGATA",8,138.68,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A22Q F62S N120I L162S",4
"lib2","SARS-CoV-2","CTCTGAAACTACTGTA",15,33.06,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15H N107D R179S",3
"lib2","SARS-CoV-2","CTCTGAACAAAGGAAC",3,11.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25P V37M K56M",3
"lib2","SARS-CoV-2","CTCTGAATATGACTAC",4,39.27,9.79,-1.05,0.08,2.68,1.07,0,">1 nonsynonymous","S139L T170S",2
"lib2","SARS-CoV-2","CTCTGAATCAAAGTGC",3,10.08,10.22,-0.62,0.15,2.67,1.26,0.01,">1 nonsynonymous","T46I K87Y P96S",3
"lib2","SARS-CoV-2","CTCTGACAGCGAGACA",7,60.97,8.83,-2,0.18,1.59,1.07,0.02,">1 nonsynonymous","S36M P96V",2
"lib2","SARS-CoV-2","CTCTGACAGGGTCACT",3,53.58,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","P7H N40V I72Q",3
"lib2","SARS-CoV-2","CTCTGACATCCACTAG",4,60.55,6,-4.84,1.07,2.07,1.12,0,">1 nonsynonymous","P7S V77S G101L D112S Y119T K198E",6
"lib2","SARS-CoV-2","CTCTGACCACAACACA",12,104.25,10.6,-0.24,0.05,2.84,1.13,0,">1 nonsynonymous","S43Y Q168S T201F",3
"lib2","SARS-CoV-2","CTCTGACCTCCGACCT",9,23.65,8.1,-2.73,0.27,1.5,1.14,0.04,">1 nonsynonymous","E76M W106A T201R",3
"lib2","SARS-CoV-2","CTCTGACCTCTATAGT",4,89.96,10.95,0.12,0.06,2.93,1.08,0,"1 nonsynonymous","L5A",1
"lib2","SARS-CoV-2","CTCTGACTCGTACCAA",5,7.27,NA,NA,NA,NA,NA,NA,"stop","L57R F70* G152M P197T",4
"lib2","SARS-CoV-2","CTCTGAGAGCTCATTG",6,73.22,10.77,-0.06,0.06,2.87,1.15,0,"1 nonsynonymous","Q163R",1
"lib2","SARS-CoV-2","CTCTGAGATACTAAAA",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V E10N D34L Q176G",4
"lib2","SARS-CoV-2","CTCTGAGATCCACGAG",1,15.19,10.94,0.1,0.15,2.97,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTCTGAGGCCTAAGAT",1,18.11,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","F12G I88N L125S C150T",4
"lib2","SARS-CoV-2","CTCTGAGTAGAGGACG",9,129.5,10.7,-0.14,0.03,2.93,1.08,0,"1 nonsynonymous","G196L",1
"lib2","SARS-CoV-2","CTCTGATAATAAATAC",5,23.9,8.09,-2.75,0.29,1.5,1,0.03,">1 nonsynonymous","F17S N64L L125H N151K",4
"lib2","SARS-CoV-2","CTCTGATAGAAATACG",2,26.55,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","T46S A105L P149D Y175S",4
"lib2","SARS-CoV-2","CTCTGATGAAACATAT",5,39.46,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A67Y P82Q",2
"lib2","SARS-CoV-2","CTCTGATGCGTTAGCA",10,120.68,6,-4.84,1.11,1.5,1.12,0.01,">1 nonsynonymous","C150L Q176F",2
"lib2","SARS-CoV-2","CTCTGATTAGCAGAAA",8,109.45,10.52,-0.31,0.03,2.92,1.05,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","CTCTGCAAACATATGG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","G9S A33D L60V D75L L125* F167L",6
"lib2","SARS-CoV-2","CTCTGCAACGAGGAAA",8,0.34,NA,NA,NA,NA,NA,NA,"stop","N58* A105* S200W",3
"lib2","SARS-CoV-2","CTCTGCACAGAACGCC",9,49.66,6,-4.84,2,1.74,1.18,0.03,">1 nonsynonymous","N92R F126T",2
"lib2","SARS-CoV-2","CTCTGCAGATTCAGTG",19,358.09,10.14,-0.7,0.04,2.78,1.03,0,">1 nonsynonymous","T15S T63S S129F N151I",4
"lib2","SARS-CoV-2","CTCTGCGATTACATTG",2,11.23,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C49Q K56E N130R F167A",4
"lib2","SARS-CoV-2","CTCTGCGGAACAACTT",5,10.16,6,-4.84,1.36,3,1.23,0.02,">1 nonsynonymous","I2C Y39R V103S R127I I138H V181R P197Q",7
"lib2","SARS-CoV-2","CTCTGGAACTGTAACA",1,49.99,10.86,0.03,0.06,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTGGAGCTTCTAGA",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68E R124G I142S Q168H Q176P",5
"lib2","SARS-CoV-2","CTCTGGCCAGATCGGT",8,283,8.44,-2.39,0.12,2.93,1.05,0.01,">1 nonsynonymous","I2R K87N Y119W P169T",4
"lib2","SARS-CoV-2","CTCTGGGAAGATCAAG",8,17.13,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S45D D98H V103S",3
"lib2","SARS-CoV-2","CTCTGGGGAAACCAAA",4,106.3,10.38,-0.45,0.06,2.82,1.19,0,">1 nonsynonymous","S29A T55C N110A",3
"lib2","SARS-CoV-2","CTCTGGTAAGCCGGAG",3,17.11,10.24,-0.59,0.13,2.38,1.21,0.01,">1 nonsynonymous","W106F G152T",2
"lib2","SARS-CoV-2","CTCTGGTAGTACCAAA",7,54.42,6.02,-4.82,0.91,1.5,1.11,0.01,">1 nonsynonymous","P82G V153S C158N",3
"lib2","SARS-CoV-2","CTCTGGTGTGTAACTA",8,144.57,10.66,-0.17,0.02,2.94,1.06,0,">1 nonsynonymous","T55S T100H V115E",3
"lib2","SARS-CoV-2","CTCTGTAAAACACATG",1,6.32,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","W106D C150R",2
"lib2","SARS-CoV-2","CTCTGTAATACGGTAC",6,54.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11G S45I D59A Y91R G152S",5
"lib2","SARS-CoV-2","CTCTGTACGTCGACTT",5,55.69,9.54,-1.3,0.06,2.9,1.15,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","CTCTGTAGAATTCTAT",10,162.76,9.32,-1.52,0.04,2.89,1.12,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","CTCTGTATGCAATGGG",1,20.1,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S53A G86W N92L Y121A",4
"lib2","SARS-CoV-2","CTCTGTTACCATGTAA",12,199.66,10.43,-0.4,0.03,2.97,1.04,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","CTCTGTTAGTCATGAA",1,3.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","CTCTGTTCATCAGCGA",9,42.47,6.52,-4.32,0.58,1.79,1.16,0.05,">1 nonsynonymous","V103Q Y143I",2
"lib2","SARS-CoV-2","CTCTGTTGGTCGTAAA",2,57.62,9.13,-1.7,0.09,2.24,1.1,0,">1 nonsynonymous","N4T N107R T140D Q168S",4
"lib2","SARS-CoV-2","CTCTTAAAAATTCCAC",5,73.66,10.7,-0.14,0.04,2.91,1.07,0,">1 nonsynonymous","E10R S43L",2
"lib2","SARS-CoV-2","CTCTTAAAATAATTTT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","F8V N24T N92E T100* I138D Q144S Q163M",7
"lib2","SARS-CoV-2","CTCTTAAAATTAGGAC",5,84.74,10.59,-0.25,0.04,2.92,1.06,0,"1 nonsynonymous","K132W",1
"lib2","SARS-CoV-2","CTCTTAAACGCAGATA",5,18.63,9.06,-1.78,0.27,1.66,1.07,0.04,">1 nonsynonymous","N92A N110Y",2
"lib2","SARS-CoV-2","CTCTTAAAGCTCCATT",4,66.02,10.1,-0.73,0.09,2.4,1.12,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","CTCTTAAATTTATGGA",10,66.41,10.78,-0.06,0.06,2.86,1.14,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","CTCTTAACACAGGAAA",14,96.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1T N107Y N157L",3
"lib2","SARS-CoV-2","CTCTTAACAGAAAGAG",3,37.91,10.81,-0.03,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTTAACAGTGTAAA",3,33.38,6.09,-4.74,0.5,1.5,1.11,0.01,">1 nonsynonymous","A22P Q84K E141H T201P",4
"lib2","SARS-CoV-2","CTCTTAACCGTAACAT",3,114.23,10.87,0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTTAAGAATAGTTG",3,24.04,10.8,-0.04,0.07,2.89,1.09,0,">1 nonsynonymous","D97L T148M",2
"lib2","SARS-CoV-2","CTCTTAAGCTCTTTAC",2,15.87,10.1,-0.74,0.08,2.85,1,0,">1 nonsynonymous","Y35R Q168F",2
"lib2","SARS-CoV-2","CTCTTAAGGGAAATAA",9,78.17,9.94,-0.9,0.09,2.18,1.03,0,">1 nonsynonymous","L5M R27W D75S G83S",4
"lib2","SARS-CoV-2","CTCTTAAGTACTTCTT",18,186.65,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","R27K Y35A K56Q G101I K199M",5
"lib2","SARS-CoV-2","CTCTTAATATGCGGTG",4,81.04,7.73,-3.1,0.26,1.5,1.07,0.02,"1 nonsynonymous","L131G",1
"lib2","SARS-CoV-2","CTCTTAATGGCGACCT",2,9.58,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","C49S F134R R179S",3
"lib2","SARS-CoV-2","CTCTTAATTCCTAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* K87W S113G P149G",4
"lib2","SARS-CoV-2","CTCTTACAGAGGAGTG",3,114.3,6,-4.84,2,3,1.13,0,">1 nonsynonymous","K87P S129N P177V",3
"lib2","SARS-CoV-2","CTCTTACATAATTAAT",5,29.72,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F12P G152Y V182E",3
"lib2","SARS-CoV-2","CTCTTACGGACGGCCT",17,199.85,10.08,-0.75,0.05,2.66,1.1,0,">1 nonsynonymous","N58A F134T",2
"lib2","SARS-CoV-2","CTCTTACGTCACTTCA",14,137.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9R L38T Y93V",3
"lib2","SARS-CoV-2","CTCTTAGCAGTATACT",2,0.32,NA,NA,NA,NA,NA,NA,"stop","S41R E141* G152P",3
"lib2","SARS-CoV-2","CTCTTAGCCAGGCCTG",1,15.95,10.03,-0.8,0.16,2.21,1,0.01,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","CTCTTAGTGGGAAATT",11,56.48,8.26,-2.57,0.21,1.5,1.1,0.02,">1 nonsynonymous","W23V S53L",2
"lib2","SARS-CoV-2","CTCTTATAGCTACATA",4,31.62,9.93,-0.91,0.16,2.36,1.04,0.01,">1 nonsynonymous","G9C D90T F160R",3
"lib2","SARS-CoV-2","CTCTTATTCACACTAG",4,91.27,9.46,-1.37,0.08,2.16,1.06,0,">1 nonsynonymous","L5N N24L A33C N120R I138Q",5
"lib2","SARS-CoV-2","CTCTTCAAATGGGCAA",5,60.73,10.37,-0.46,0.03,2.91,1.01,0,">1 nonsynonymous","E10P N109V P149S T201K",4
"lib2","SARS-CoV-2","CTCTTCAATTCTAACA",5,1.05,NA,NA,NA,NA,NA,NA,"stop","L60* W106S V153G F167S",4
"lib2","SARS-CoV-2","CTCTTCAGACGTTCTG",6,93.42,6.01,-4.83,0.96,1.5,1.2,0.01,">1 nonsynonymous","Y35A L60T V103L T201N",4
"lib2","SARS-CoV-2","CTCTTCATATGGTTTT",2,20.19,9.93,-0.9,0.1,2.71,1.14,0.01,">1 nonsynonymous","N4F G116S K128G",3
"lib2","SARS-CoV-2","CTCTTCCACGGAGAAC",2,22.87,8.41,-2.42,0.08,2.44,1,0,">1 nonsynonymous","N13D G117H S200L",3
"lib2","SARS-CoV-2","CTCTTCCCCAACCCGA",2,2.05,NA,NA,NA,NA,NA,NA,"stop","D68E Y91* A190G",3
"lib2","SARS-CoV-2","CTCTTCGAGCATTCCT",7,17.3,6.45,-4.39,0.6,1.5,1.17,0.02,">1 nonsynonymous","V37D P54S Y66Q P96R K114L C158H",6
"lib2","SARS-CoV-2","CTCTTCTAGGACATAA",6,19.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55A V103W",2
"lib2","SARS-CoV-2","CTCTTCTTAAATTGAC",13,132.66,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V20R F167S",2
"lib2","SARS-CoV-2","CTCTTCTTAATGGATT",12,72.51,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86Q D137K",2
"lib2","SARS-CoV-2","CTCTTGAAAACCACCT",3,18,6.19,-4.65,0.66,1.5,1.09,0.01,">1 nonsynonymous","A33R A42F G51K P96M C102I L131C",6
"lib2","SARS-CoV-2","CTCTTGCAATAGTATG",6,64.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5I C31N I80Q D98I",4
"lib2","SARS-CoV-2","CTCTTGCAGAGCACAC",3,8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S45V V77M G155I",3
"lib2","SARS-CoV-2","CTCTTGCCCAGTCACT",8,52.31,9.24,-1.6,0.11,1.75,1.14,0.01,">1 nonsynonymous","D34G V77M",2
"lib2","SARS-CoV-2","CTCTTGCCCCCGCTGC",5,150.94,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V37D D98P V103W E154K",4
"lib2","SARS-CoV-2","CTCTTGTACCCGAGTA",6,161.92,10.53,-0.31,0.04,2.97,1.05,0,">1 nonsynonymous","N58L P197N",2
"lib2","SARS-CoV-2","CTCTTGTACGCACAAA",9,56.31,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","A67D",1
"lib2","SARS-CoV-2","CTCTTGTTACGATGGA",2,72.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18E D90R L125R Y175R",4
"lib2","SARS-CoV-2","CTCTTTAACCACTCTA",3,33.86,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R27C S45R V103E",3
"lib2","SARS-CoV-2","CTCTTTAAGCTAAGAA",8,119.41,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1T A42R C61N D90Y G146T Y165W",6
"lib2","SARS-CoV-2","CTCTTTACATGTTAAA",13,156.79,6.3,-4.53,0.55,1.5,1.19,0.02,">1 nonsynonymous","Y66I L131G",2
"lib2","SARS-CoV-2","CTCTTTACGAATACAT",4,20.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S C61W F70L",3
"lib2","SARS-CoV-2","CTCTTTAGGGATAAAA",8,29.72,10.96,0.13,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTTTATACGTACAT",4,31.34,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V71R A81H K87Y V103F",4
"lib2","SARS-CoV-2","CTCTTTCAAACCCGCG",1,10.6,9.17,-1.67,0.12,2.85,1.1,0,">1 nonsynonymous","T55F N157S",2
"lib2","SARS-CoV-2","CTCTTTCATAGAACTT",2,83.21,10.75,-0.09,0.08,2.66,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTTTCCAACTACCG",24,131.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19L Q79W D112R Y119V E141S",5
"lib2","SARS-CoV-2","CTCTTTCCAATGCCAA",4,52.29,10.93,0.09,0.07,2.91,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTCTTTCCATAGGTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* K56S Y143V T170R",4
"lib2","SARS-CoV-2","CTCTTTCTGGCTTTCG",4,1.41,NA,NA,NA,NA,NA,NA,"stop","I2L G9L N24L P82* L95G",5
"lib2","SARS-CoV-2","CTCTTTCTGTTCATGC",10,111.71,6,-4.84,0.83,1.5,1.19,0.01,">1 nonsynonymous","F62W I80R Y165K Y178R",4
"lib2","SARS-CoV-2","CTCTTTGACATGGAGG",10,149.69,10.13,-0.71,0.05,2.66,1.02,0,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","CTCTTTGCGATCCGCA",3,17.18,8.44,-2.4,0.23,2.75,1.35,0.02,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","CTCTTTGCGCCATACT",11,36.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25S S41V G83R E141L",4
"lib2","SARS-CoV-2","CTCTTTGCTTGTAAAC",15,145.84,8.35,-2.49,0.09,2.73,1.09,0,">1 nonsynonymous","L60Q N109S Q168T T201N",4
"lib2","SARS-CoV-2","CTCTTTTCAAAGTCAC",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112H G152F",2
"lib2","SARS-CoV-2","CTCTTTTCTAAAGACG",21,167.47,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C6V Q84L V173S",3
"lib2","SARS-CoV-2","CTCTTTTCTTCCCGAG",2,69.48,10.17,-0.67,0.04,2.82,1.04,0,">1 nonsynonymous","V32H L60N Q144G",3
"lib2","SARS-CoV-2","CTCTTTTGGCTTAATA",3,14.91,6.65,-4.19,0.53,1.5,1.13,0.03,">1 nonsynonymous","E10R A42F D98K L125F E135K",5
"lib2","SARS-CoV-2","CTCTTTTTCAATCTTT",2,117.9,10.82,-0.02,0.06,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CTCTTTTTCCAAAAAC",8,62.33,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","E10V K56W C61V D112G",4
"lib2","SARS-CoV-2","CTCTTTTTTTAGGGAG",12,111.02,9.37,-1.46,0.07,1.93,1.12,0,">1 nonsynonymous","L125I F185R",2
"lib2","SARS-CoV-2","CTGAAAAACTAACTGT",3,8.69,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13I L57E K94D",3
"lib2","SARS-CoV-2","CTGAAAAATCAAGGTC",7,79.3,9.87,-0.96,0.09,2.43,1.01,0,">1 nonsynonymous","D97L V115Q N130S S139V",4
"lib2","SARS-CoV-2","CTGAAAAATGTGGTGA",1,65.14,10.84,0,0.05,2.96,1.06,0,"1 nonsynonymous","S43H",1
"lib2","SARS-CoV-2","CTGAAAACAACGCTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R G116W G172M",3
"lib2","SARS-CoV-2","CTGAAAACATCGATAA",5,56.47,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F8M D68K L122K E141Y",4
"lib2","SARS-CoV-2","CTGAAAACGGATACAA",12,92.97,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L95R D112V",2
"lib2","SARS-CoV-2","CTGAAAAGAATAGTAA",2,36.18,9.14,-1.7,0.14,1.84,1.1,0.01,"1 nonsynonymous","Y165R",1
"lib2","SARS-CoV-2","CTGAAAAGGGGCCGCT",12,129.55,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","CTGAAAATACAATGCC",13,161.67,10.68,-0.15,0.04,2.96,1.05,0,">1 nonsynonymous","N40T T46M",2
"lib2","SARS-CoV-2","CTGAAACAGTACGAGA",10,94.8,10.72,-0.12,0.04,2.94,1.07,0,">1 nonsynonymous","D59G P149R",2
"lib2","SARS-CoV-2","CTGAAACCATACCAAT",1,20.83,10.8,-0.04,0.06,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGAAACGGCCGTCTG",10,181.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38P Y93A L125D Y165S G174A",5
"lib2","SARS-CoV-2","CTGAAACGTGTGAGTT",10,45.5,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","N1I I104K",2
"lib2","SARS-CoV-2","CTGAAACGTTAAATTT",2,11.46,8.95,-1.89,0.15,1.9,1.14,0.01,">1 nonsynonymous","C6N K56S Q84F",3
"lib2","SARS-CoV-2","CTGAAACTAATTTATC",7,57.79,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I88C P133T T140E G155S",4
"lib2","SARS-CoV-2","CTGAAACTTTGGTGCC",6,31.39,10.8,-0.04,0.06,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGAAAGATTATCGGG",5,135.33,10.41,-0.43,0.05,2.81,1.06,0,">1 nonsynonymous","G51R Q176N",2
"lib2","SARS-CoV-2","CTGAAAGCCGAGACAG",2,38.19,10.78,-0.06,0.04,3,1.01,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","CTGAAAGCTAGCTGTA",4,85.61,10.78,-0.06,0.04,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGAAAGGAAATTCGA",11,110.16,10.58,-0.25,0.1,2.69,1.12,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","CTGAAAGGTAGCAAAG",11,58.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T3R C61R D68E N118T S139A",5
"lib2","SARS-CoV-2","CTGAAAGTACGCCCGT",1,5.23,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I72V V181D",2
"lib2","SARS-CoV-2","CTGAAATAAAGGATTT",9,10.25,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","L60V R73V G86D",3
"lib2","SARS-CoV-2","CTGAAATCACAATCAC",7,118.81,8.69,-2.14,0.06,2.77,1.12,0,">1 nonsynonymous","N40M G117D",2
"lib2","SARS-CoV-2","CTGAAATCGTGGAGCA",10,110.09,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L95H W106Y Y121L S129G P149V",5
"lib2","SARS-CoV-2","CTGAAATGTAGACTCA",4,30.74,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N4L D112P",2
"lib2","SARS-CoV-2","CTGAAATTAAAGGAAC",1,15.55,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","A33S F99R G146D N151V",4
"lib2","SARS-CoV-2","CTGAAATTGACAATAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","V65* G146A F156R F167A",4
"lib2","SARS-CoV-2","CTGAAATTGTGTAAAG",2,30.17,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44L F70A R124I V173C F185Y",5
"lib2","SARS-CoV-2","CTGAACAAAAGTCTAA",6,191.83,10.32,-0.52,0.03,2.89,1.01,0,"1 nonsynonymous","V11T",1
"lib2","SARS-CoV-2","CTGAACAAACAGTCTA",3,11.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G101D G146L",2
"lib2","SARS-CoV-2","CTGAACAAATCTAATA",4,15.31,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2G N13E Y66G S113D T201M",5
"lib2","SARS-CoV-2","CTGAACAATTAAGAAA",7,0.74,NA,NA,NA,NA,NA,NA,"stop","N40F T55* L60T I80N K114E K199I",6
"lib2","SARS-CoV-2","CTGAACACGGTCATAG",1,14.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S45L I88Q",2
"lib2","SARS-CoV-2","CTGAACACGTACAAAA",2,19.08,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","S19H Y91E L125F S139M P197S",5
"lib2","SARS-CoV-2","CTGAACAGATTGTATA",14,321.88,8.78,-2.06,0.06,2.85,1.07,0,">1 nonsynonymous","T148P E154F",2
"lib2","SARS-CoV-2","CTGAACAGCACGTAGT",7,108.6,10.85,0.02,0.07,2.89,1.1,0,">1 nonsynonymous","G83R L111K L122M T201S",4
"lib2","SARS-CoV-2","CTGAACATAACATTAA",1,53.57,8.84,-2,0.07,3,1.04,0,">1 nonsynonymous","G152Q G166R G196S",3
"lib2","SARS-CoV-2","CTGAACCAAGTATAAG",5,2.23,NA,NA,NA,NA,NA,NA,"stop","N24Q L131P A145* Q163L",4
"lib2","SARS-CoV-2","CTGAACCAATAAGCCT",3,17.78,10.36,-0.48,0.09,2.92,1,0.01,">1 nonsynonymous","C31K T140N",2
"lib2","SARS-CoV-2","CTGAACCAGAGTTAAA",3,45.37,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F47D L57Y K132P",3
"lib2","SARS-CoV-2","CTGAACCATGCCATCT",8,7.17,NA,NA,NA,NA,NA,NA,"stop","T85* L95P",2
"lib2","SARS-CoV-2","CTGAACCATGTCGACG",9,76.19,9.35,-1.49,0.17,1.5,1.12,0.01,">1 nonsynonymous","Y66E D75G T140N S184V",4
"lib2","SARS-CoV-2","CTGAACCCTTACACAA",6,132.86,10.83,0,0.05,2.92,1.08,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","CTGAACGAATAATCTT",3,27.42,9.56,-1.28,0.11,2.26,1.09,0.01,">1 nonsynonymous","D98Y Y178L",2
"lib2","SARS-CoV-2","CTGAACGACGACACTA",8,205.9,8.46,-2.38,0.1,2.97,1.1,0,">1 nonsynonymous","S43H C61T Q168K",3
"lib2","SARS-CoV-2","CTGAACGGCCTCCTAA",4,24.44,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","N24Q A81V S113D",3
"lib2","SARS-CoV-2","CTGAACGGTTTTCGGA",21,198.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2Y V37R D75F T100I A145G G155H P161V",7
"lib2","SARS-CoV-2","CTGAACGTAACGTAAA",6,101.03,9.75,-1.09,0.11,1.9,1.07,0.01,">1 nonsynonymous","E10D F134K S147R N151L",4
"lib2","SARS-CoV-2","CTGAACTAAACTGACA",1,6.27,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10S S36L S53V L131C T201M",5
"lib2","SARS-CoV-2","CTGAACTTTGAAGCAA",4,19.42,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","L5F E76T K87E K114L E154C",5
"lib2","SARS-CoV-2","CTGAAGAAAAAGGCCG",3,46.01,9.41,-1.43,0.11,1.95,1.16,0,">1 nonsynonymous","D34R N120A S129L",3
"lib2","SARS-CoV-2","CTGAAGAAAGCCTGCA",2,13.59,10.54,-0.3,0.09,2.79,1.2,0,">1 nonsynonymous","A14E S129N Q163T",3
"lib2","SARS-CoV-2","CTGAAGAAGAGGAATA",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R Y91A G166E",3
"lib2","SARS-CoV-2","CTGAAGAAGCTAACTT",2,49.64,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","Y39S G86K T170S V181N",4
"lib2","SARS-CoV-2","CTGAAGACATGACAAG",2,12.28,9.83,-1.01,0.14,2.52,1.2,0.01,">1 nonsynonymous","R27E Q144Y K198M",3
"lib2","SARS-CoV-2","CTGAAGACATTGCAAG",12,80.84,10.78,-0.06,0.06,2.95,1.09,0,">1 nonsynonymous","R16S V37W F134Y K199I",4
"lib2","SARS-CoV-2","CTGAAGAGGTAACTCT",5,17.41,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","F17R L38P",2
"lib2","SARS-CoV-2","CTGAAGATTGGCTACG",6,7.29,6.79,-4.04,0.57,1.5,1.08,0.03,">1 nonsynonymous","A18R C31Y V52A D68M T140R S164L",6
"lib2","SARS-CoV-2","CTGAAGCAAGCCATTT",1,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L T55D A89F T148A",4
"lib2","SARS-CoV-2","CTGAAGCAATTAGGGA",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S V52H Y91K F99A",4
"lib2","SARS-CoV-2","CTGAAGCAGGAGGCTG",1,15.54,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","Y35N N92E K128S E141M",4
"lib2","SARS-CoV-2","CTGAAGCCAAAAGCAT",2,17.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8S A14L I88G",3
"lib2","SARS-CoV-2","CTGAAGCCATTAATTA",2,95.47,10.74,-0.09,0.06,2.93,1.09,0,">1 nonsynonymous","S129D T201L",2
"lib2","SARS-CoV-2","CTGAAGCGGAAACATC",1,15.95,10.78,-0.05,0.08,2.92,1.08,0,">1 nonsynonymous","V37R T140S K198V",3
"lib2","SARS-CoV-2","CTGAAGCGGGCACTAA",7,23.38,7.14,-3.7,0.28,1.5,1.07,0.02,">1 nonsynonymous","F44A Y50I E141N",3
"lib2","SARS-CoV-2","CTGAAGCTACATATAA",1,33.52,10.28,-0.56,0.04,2.99,1.02,0,"1 nonsynonymous","T170A",1
"lib2","SARS-CoV-2","CTGAAGCTTAAACCCA",15,209.35,8.79,-2.05,0.07,2.88,1.06,0,">1 nonsynonymous","K48T G146K",2
"lib2","SARS-CoV-2","CTGAAGCTTGGCCCTG",4,0,NA,NA,NA,NA,NA,NA,"stop","Y91I D97* Y119R F185I",4
"lib2","SARS-CoV-2","CTGAAGGAAGATAAAC",2,11.88,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6E F47N T55F T63Y K87G T170S",6
"lib2","SARS-CoV-2","CTGAAGGACTCCAATC",6,50.02,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V71S G116N Q144Y G152R",4
"lib2","SARS-CoV-2","CTGAAGGCTTCAGCTG",2,29.57,7.49,-3.34,0.19,1.5,1.04,0.01,">1 nonsynonymous","N64S G83T Y143N",3
"lib2","SARS-CoV-2","CTGAAGTAGCTAGGAT",11,2.42,NA,NA,NA,NA,NA,NA,"stop","V103* C150K",2
"lib2","SARS-CoV-2","CTGAAGTCATCTACTT",3,11.3,10.21,-0.63,0.11,2.65,1.16,0.01,">1 nonsynonymous","L5N L183V",2
"lib2","SARS-CoV-2","CTGAAGTGTGGTAGAA",3,37.55,6.73,-4.11,0.54,1.5,1.21,0.07,">1 nonsynonymous","S53R N107F F126K",3
"lib2","SARS-CoV-2","CTGAAGTGTGTGGTGG",8,116.22,10.28,-0.55,0.03,2.89,1.05,0,">1 nonsynonymous","N64I V115G",2
"lib2","SARS-CoV-2","CTGAAGTTCACTATAG",7,1.43,NA,NA,NA,NA,NA,NA,"stop","T85L S113D K128* G166Y",4
"lib2","SARS-CoV-2","CTGAAGTTGGCAGCTG",4,18.57,8.17,-2.67,0.27,1.5,1.02,0.03,">1 nonsynonymous","F99I N120Y G174S",3
"lib2","SARS-CoV-2","CTGAATAAAATAAAGC",1,8.73,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F99L P161L",2
"lib2","SARS-CoV-2","CTGAATAAACAAAGAT",7,167.6,10.68,-0.16,0.03,2.95,1.05,0,">1 nonsynonymous","Y91F D98A",2
"lib2","SARS-CoV-2","CTGAATAAACTGGTTA",19,169.82,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","W106T F167P",2
"lib2","SARS-CoV-2","CTGAATAATAAACCGT",3,84.34,10.28,-0.56,0.06,2.93,1.07,0,">1 nonsynonymous","V37F G174E",2
"lib2","SARS-CoV-2","CTGAATACAATAATAA",10,104.54,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N40S G101H S108Y N118H G166W",5
"lib2","SARS-CoV-2","CTGAATACATAATAGC",1,30.95,9.37,-1.47,0.09,2.83,1.08,0,">1 nonsynonymous","N109S G196I",2
"lib2","SARS-CoV-2","CTGAATACATGTGCAC",2,52.32,10.77,-0.06,0.06,2.9,1.06,0,">1 nonsynonymous","S43Y E135Q",2
"lib2","SARS-CoV-2","CTGAATAGAATTAGTG",10,70.58,9.86,-0.98,0.1,2.33,1.05,0,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","CTGAATAGATAGATCA",3,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R F99T",2
"lib2","SARS-CoV-2","CTGAATAGCCTATCCC",13,19.77,6.17,-4.67,0.57,1.5,1.14,0.01,">1 nonsynonymous","F62I A105E S147L L183R",4
"lib2","SARS-CoV-2","CTGAATCAAAAAAATA",5,62.06,10.82,-0.02,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGAATCAATAGCCGT",2,42.69,6.5,-4.33,0.31,1.5,1.16,0.01,">1 nonsynonymous","N1R A14V V37S D59G D98S Y143V",6
"lib2","SARS-CoV-2","CTGAATCACCTGCAAA",3,9.93,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","N13Y K56F C150L T193N",4
"lib2","SARS-CoV-2","CTGAATCACGGAGACG",4,28.93,6,-4.84,2,3,1.18,0.05,">1 nonsynonymous","N4L C61V P82H N120P",4
"lib2","SARS-CoV-2","CTGAATCTAAGGCTGG",1,35.59,9.59,-1.25,0.08,2.13,1.05,0,">1 nonsynonymous","N1H P133S E141A C195W",4
"lib2","SARS-CoV-2","CTGAATCTATACACCG",17,9.86,NA,NA,NA,NA,NA,NA,"stop","S45E P96*",2
"lib2","SARS-CoV-2","CTGAATCTGTGGAAGC",26,344.97,10.85,0.02,0.04,2.92,1.09,0,"1 nonsynonymous","V65I",1
"lib2","SARS-CoV-2","CTGAATGAAACTTACA",1,30.96,10.44,-0.4,0.07,2.85,1.1,0,">1 nonsynonymous","Q84Y V115P L188H K199S",4
"lib2","SARS-CoV-2","CTGAATGAATTATGAG",4,0.2,NA,NA,NA,NA,NA,NA,"stop","Q84L N107S V153A Q176* S184V",5
"lib2","SARS-CoV-2","CTGAATGACGCGTACA",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90K F99Q L122K",3
"lib2","SARS-CoV-2","CTGAATGATTCGAATT",8,51.31,6.21,-4.62,0.75,1.5,1.29,0.02,">1 nonsynonymous","T46S D59S Y66L D90S C102R N107I E154I",7
"lib2","SARS-CoV-2","CTGAATGCAACTCATT",2,6.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P T85S L187P",3
"lib2","SARS-CoV-2","CTGAATGCATCACGAG",7,2.67,NA,NA,NA,NA,NA,NA,"stop","N4* F44G F99G",3
"lib2","SARS-CoV-2","CTGAATGCGTGACAAT",17,66.02,6.37,-4.47,0.91,1.5,1.35,0.06,">1 nonsynonymous","G86M V103S",2
"lib2","SARS-CoV-2","CTGAATGCTCAGACAA",15,111.19,6,-4.84,2,1.5,1.25,0.02,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","CTGAATGTAACAGTAT",6,7.86,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50C L57K D112L F156V",4
"lib2","SARS-CoV-2","CTGAATGTACCCCTCC",3,46.78,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","T3Y A105L T140G T148M Y178S",5
"lib2","SARS-CoV-2","CTGAATGTTTAGCACT",8,121.13,6,-4.84,1.6,1.5,1.18,0.01,">1 nonsynonymous","F70S A105V Y175P",3
"lib2","SARS-CoV-2","CTGAATTCAACATAAA",1,6.38,9.11,-1.73,0.17,2.14,1.12,0.01,">1 nonsynonymous","I28S L60S",2
"lib2","SARS-CoV-2","CTGAATTCTCCAAACC",4,59.3,10.45,-0.39,0.05,2.91,1.09,0,">1 nonsynonymous","G83Q D98N S129I",3
"lib2","SARS-CoV-2","CTGAATTGAAGGATGA",4,54.31,11.03,0.19,0.05,2.94,1.06,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","CTGAATTGGAAAAATA",18,130.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2F F44A W106C G166F",4
"lib2","SARS-CoV-2","CTGAATTGGATAACGG",10,40.41,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","T3D G51V F126V S139R T140G Q168L G174T",7
"lib2","SARS-CoV-2","CTGAATTTTTCAATAT",8,214.26,10.79,-0.05,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGACAAAAAGCACGT",4,74.78,10.75,-0.09,0.03,3,1.01,0,">1 nonsynonymous","K56V E141Q",2
"lib2","SARS-CoV-2","CTGACAAAAGATCACC",6,33.21,6.15,-4.69,0.87,1.5,1.25,0.03,"1 nonsynonymous","V103F",1
"lib2","SARS-CoV-2","CTGACAAAATTGCGTG",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126V R136C F185S",3
"lib2","SARS-CoV-2","CTGACAAACCGATACA",6,92.39,10.35,-0.49,0.06,2.76,1.13,0,">1 nonsynonymous","A33I K56T A105T",3
"lib2","SARS-CoV-2","CTGACAAATAGCTTAG",9,12.87,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C61E D98G G116R V182E",4
"lib2","SARS-CoV-2","CTGACAAATCCTAGAG",1,101.31,10.72,-0.11,0.04,2.93,1.09,0,"1 nonsynonymous","Y66M",1
"lib2","SARS-CoV-2","CTGACAACATTCCTAA",1,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","CTGACAACCCAATAAC",3,12.83,10.5,-0.34,0.11,2.99,1.07,0.01,">1 nonsynonymous","V37D C61G S139T",3
"lib2","SARS-CoV-2","CTGACAAGGATTGGAT",10,104.01,10.74,-0.09,0.04,2.88,1.13,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","CTGACAAGGGAAGGCA",4,24.59,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","S19T E76S Y91F F99M",4
"lib2","SARS-CoV-2","CTGACAATACAATACA",3,27.24,10.78,-0.06,0.08,2.93,1.08,0,">1 nonsynonymous","Y91F C195F",2
"lib2","SARS-CoV-2","CTGACAATACTCATCA",5,5.44,NA,NA,NA,NA,NA,NA,"stop","C6I V11R D98W I104R T201*",5
"lib2","SARS-CoV-2","CTGACAATGCCCATCT",6,102.89,10,-0.83,0.05,2.84,1.01,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","CTGACAATTATTATAT",6,52.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94G N107R",2
"lib2","SARS-CoV-2","CTGACAATTCTTAATA",3,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E N13F A81G S147C",4
"lib2","SARS-CoV-2","CTGACACAAATACACC",3,72.35,9.57,-1.26,0.06,2.91,1.06,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","CTGACACAACGCTGAG",9,1.39,NA,NA,NA,NA,NA,NA,"stop","V77* G101S N107D",3
"lib2","SARS-CoV-2","CTGACACACAACACAA",3,72.25,9.75,-1.09,0.03,2.94,1.07,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","CTGACACAGAGCTTGC",5,15.42,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","S43R V77H V103R P133L",4
"lib2","SARS-CoV-2","CTGACACATCTAACGT",8,24.75,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3A D90E C102S L122V P149T Y178I K198L",7
"lib2","SARS-CoV-2","CTGACACATGTCTCTT",11,83.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L95H S113A",2
"lib2","SARS-CoV-2","CTGACACATTACCTGA",4,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A A42L F99Y F160P P169R",5
"lib2","SARS-CoV-2","CTGACACCCAACATCG",3,63.37,9.99,-0.84,0.07,2.7,1.07,0,">1 nonsynonymous","N58F V77I N151H",3
"lib2","SARS-CoV-2","CTGACACGATATACTG",7,32.57,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L38S S69H P82L",3
"lib2","SARS-CoV-2","CTGACACTCAAAATCC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83N N120M I142P",3
"lib2","SARS-CoV-2","CTGACAGATTATTTTG",7,34.52,8.65,-2.18,0.23,1.5,1,0.03,">1 nonsynonymous","T63S P82K D98S",3
"lib2","SARS-CoV-2","CTGACAGCAACTTGAA",7,121.11,10,-0.84,0.09,2.48,1.06,0,">1 nonsynonymous","S41E Y91V",2
"lib2","SARS-CoV-2","CTGACAGCAAGTATTA",2,23.63,8.36,-2.47,0.15,2.06,1.03,0.01,">1 nonsynonymous","V32E T55A G146V",3
"lib2","SARS-CoV-2","CTGACAGGGACAGAAG",14,73.76,9.96,-0.87,0.05,2.84,1.03,0,">1 nonsynonymous","C6A T15E T46S T55R",4
"lib2","SARS-CoV-2","CTGACAGTGCTGACAG",2,18.1,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T15S I80Y T201S",3
"lib2","SARS-CoV-2","CTGACAGTTAACAAGT",1,22.58,10.75,-0.08,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGACAGTTACGCATG",1,29.87,9.84,-1,0.08,2.66,1.14,0,">1 nonsynonymous","G116M K132F",2
"lib2","SARS-CoV-2","CTGACATAAAGAAACA",17,91.85,6.72,-4.12,0.43,1.5,1.18,0.02,">1 nonsynonymous","L57Y W106V P149N",3
"lib2","SARS-CoV-2","CTGACATAGGTTTAAG",2,1.41,NA,NA,NA,NA,NA,NA,"stop","A42V V77* Y123P",3
"lib2","SARS-CoV-2","CTGACATAGTAATCTG",3,12.21,10.34,-0.49,0.1,3,1.04,0,">1 nonsynonymous","T3A D97G",2
"lib2","SARS-CoV-2","CTGACATGAACGTTGA",1,61.72,10.11,-0.72,0.05,2.84,1.02,0,">1 nonsynonymous","A14K A33K L122E N130T",4
"lib2","SARS-CoV-2","CTGACATGATCTTACT",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S F70S D90L S147C",4
"lib2","SARS-CoV-2","CTGACATGGTCGACCT",18,153,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50I K87D F99G",3
"lib2","SARS-CoV-2","CTGACATTAACGGTCA",1,12.41,10.25,-0.58,0.16,2.35,1,0.01,">1 nonsynonymous","T15Y L60F",2
"lib2","SARS-CoV-2","CTGACATTGCTTAAAA",10,27.98,9.51,-1.33,0.1,1.97,1.06,0,">1 nonsynonymous","C31R E186I",2
"lib2","SARS-CoV-2","CTGACCAACTTATGTA",2,50.21,10.24,-0.6,0.05,2.86,1.01,0,">1 nonsynonymous","N1E D90K K128I",3
"lib2","SARS-CoV-2","CTGACCAAGAAGTTCT",3,5.47,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C102G S184E",2
"lib2","SARS-CoV-2","CTGACCAATCATGGAT",12,108.66,10.96,0.12,0.05,2.98,1.03,0,"1 nonsynonymous","Q168F",1
"lib2","SARS-CoV-2","CTGACCACTATGGTAA",1,6.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W S41R V52E A105E Q144H",5
"lib2","SARS-CoV-2","CTGACCCAATATACCG",6,86.4,6.02,-4.82,0.67,1.5,1.12,0.01,">1 nonsynonymous","S41Q G83T P177C",3
"lib2","SARS-CoV-2","CTGACCCATGATTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2N Y91* K114L",3
"lib2","SARS-CoV-2","CTGACCCCACTGGGCC",1,10.19,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A22V D90R A105G",3
"lib2","SARS-CoV-2","CTGACCCGATTTAGAA",3,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S G101A N171H",3
"lib2","SARS-CoV-2","CTGACCCGTTGCCATC",10,150.66,10.24,-0.59,0.04,2.82,1.05,0,">1 nonsynonymous","N13L V153L",2
"lib2","SARS-CoV-2","CTGACCGCAAATCCAA",10,222.08,6.04,-4.8,0.48,1.77,1.15,0,">1 nonsynonymous","I138T C158L L187H",3
"lib2","SARS-CoV-2","CTGACCGTGTCGCTAA",1,13.83,10.16,-0.68,0.11,2.77,1.23,0.01,">1 nonsynonymous","G152H T170Q",2
"lib2","SARS-CoV-2","CTGACCTAACGGATAA",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99G F126T T201W",3
"lib2","SARS-CoV-2","CTGACCTACCAGAAAA",2,104.92,9.86,-0.98,0.04,2.9,1.07,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","CTGACCTCACACTCCT",9,111.45,8.66,-2.18,0.05,2.14,1.07,0,">1 nonsynonymous","V37S G83D T140L E154F",4
"lib2","SARS-CoV-2","CTGACCTCTAATTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52R L60S I104W S139P T148Q",5
"lib2","SARS-CoV-2","CTGACCTCTTTTCCCA",12,171.42,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V37K K56M V103S Y178A",4
"lib2","SARS-CoV-2","CTGACCTGTACATACG",3,34.06,9.81,-1.03,0.12,2.29,1.09,0.01,">1 nonsynonymous","D34F L60R",2
"lib2","SARS-CoV-2","CTGACCTTTCCATTGA",2,8.29,6.17,-4.67,0.53,1.5,1.08,0.01,">1 nonsynonymous","C6L R127V F185C C195M",4
"lib2","SARS-CoV-2","CTGACGAAAGGAGAAA",5,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18V N40I G101R F160A Q168P",5
"lib2","SARS-CoV-2","CTGACGAACATATCCT",1,10.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6Y W23M L38D T46G Y121G V173L",6
"lib2","SARS-CoV-2","CTGACGAAGCGAGGAG",3,3.61,NA,NA,NA,NA,NA,NA,"stop","V37R A42* I88N I104Y I142N N157T T170G",7
"lib2","SARS-CoV-2","CTGACGACCACTGAGA",3,11.74,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N1T D90L W106S T140E G174V",5
"lib2","SARS-CoV-2","CTGACGATTGCAGATG",4,48.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48H P82Y Y165L",3
"lib2","SARS-CoV-2","CTGACGCAGGTAGTAA",11,121.89,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y35R F167L",2
"lib2","SARS-CoV-2","CTGACGCATAGACGTG",5,58,9.92,-0.91,0.09,2.36,1.08,0,">1 nonsynonymous","L5G V65H",2
"lib2","SARS-CoV-2","CTGACGCGGTCTGAAT",8,59.14,10.65,-0.19,0.05,2.93,1.02,0,">1 nonsynonymous","T85M A190P",2
"lib2","SARS-CoV-2","CTGACGCTATGCGGGT",13,202.9,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S41L C61S A89C N157L",4
"lib2","SARS-CoV-2","CTGACGGATATTGCGC",5,78.87,10.15,-0.69,0.08,2.57,1.02,0,">1 nonsynonymous","V52L P96A P149L",3
"lib2","SARS-CoV-2","CTGACGGGGTGTGTAC",6,37.67,6,-4.84,1.9,1.5,1.1,0,">1 nonsynonymous","N64C Y123D G146P",3
"lib2","SARS-CoV-2","CTGACGGTACAAAGTT",2,101.94,10.25,-0.59,0.02,2.95,1.02,0,">1 nonsynonymous","K132C I138S",2
"lib2","SARS-CoV-2","CTGACGTACCACTAGA",3,3.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G P96M",2
"lib2","SARS-CoV-2","CTGACTACTTTTGTAT",6,55.37,8.69,-2.15,0.09,1.88,1.1,0,">1 nonsynonymous","A14S G74F",2
"lib2","SARS-CoV-2","CTGACTATCGTTGAAT",3,47.69,10.36,-0.48,0.05,2.95,1.07,0,">1 nonsynonymous","G9R N24D T55G D97N",4
"lib2","SARS-CoV-2","CTGACTCAAATAGTCT",3,8.36,7.63,-3.2,0.19,2.06,1.07,0.02,">1 nonsynonymous","L5H Q84R P161N",3
"lib2","SARS-CoV-2","CTGACTCACCTATTAT",5,115.15,9.84,-1,0.06,2.76,1.07,0,">1 nonsynonymous","E10K G83Y G174P",3
"lib2","SARS-CoV-2","CTGACTCACTCACGAA",6,61.43,8.72,-2.11,0.1,2.87,1.21,0,">1 nonsynonymous","N157E T201F",2
"lib2","SARS-CoV-2","CTGACTCTGCTCTTAG",7,46.51,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F44A G101F Y119R E141D C158D G166M",6
"lib2","SARS-CoV-2","CTGACTGACCTCGCTA",2,42.87,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","R136I C150K",2
"lib2","SARS-CoV-2","CTGACTGGAAGCTGGG",1,37.48,10.45,-0.39,0.07,2.81,1.22,0,">1 nonsynonymous","F44I T148I",2
"lib2","SARS-CoV-2","CTGACTGTGGATCTCA",12,154.56,8.95,-1.89,0.07,2.56,1.08,0,">1 nonsynonymous","N120V F126C V153F",3
"lib2","SARS-CoV-2","CTGACTTCGGGCGAAC",3,42.29,9.76,-1.08,0.06,2.9,1.02,0,">1 nonsynonymous","V52I E154W",2
"lib2","SARS-CoV-2","CTGACTTGAGACAACT",10,110.8,10.02,-0.82,0.04,2.83,1.07,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","CTGACTTGATAGTGCG",3,35.06,9.45,-1.38,0.08,1.81,1.07,0,">1 nonsynonymous","S43T R73K W106A",3
"lib2","SARS-CoV-2","CTGACTTGGGCAGATA",5,56.75,9.94,-0.9,0.1,2.53,1,0,">1 nonsynonymous","F185T G196S",2
"lib2","SARS-CoV-2","CTGAGAAAACAAACAT",5,15.28,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14S Y66A F99P",3
"lib2","SARS-CoV-2","CTGAGAAAAGTGATAA",3,10.61,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","R25S K94M F99L V103N",4
"lib2","SARS-CoV-2","CTGAGAAAATGGTTCT",1,103.46,10.6,-0.24,0.04,2.89,1.08,0,"1 nonsynonymous","R78V",1
"lib2","SARS-CoV-2","CTGAGAAACTCGCGAC",3,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56C L187E A192Q T201Y",4
"lib2","SARS-CoV-2","CTGAGAAACTTTTATA",8,48.82,8.42,-2.42,0.3,1.5,1.03,0.03,">1 nonsynonymous","Y21C Y39L D90G",3
"lib2","SARS-CoV-2","CTGAGAAAGGACATAC",2,14.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86E A105S E135T Q144S Y175E",5
"lib2","SARS-CoV-2","CTGAGAAATGGTAACA",5,95.08,10.77,-0.07,0.04,3,1.02,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","CTGAGAAGCAAATACC",5,49.9,10.82,-0.01,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGAGAAGCAGCGACG",2,0,NA,NA,NA,NA,NA,NA,"stop","T15A D98* R136E",3
"lib2","SARS-CoV-2","CTGAGAATATATGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V11F N40D A89* P149T",4
"lib2","SARS-CoV-2","CTGAGAATGGCAAAAT",2,26.43,6.2,-4.63,0.87,1.5,1.14,0.04,">1 nonsynonymous","T63L A89H N118E F167G",4
"lib2","SARS-CoV-2","CTGAGACAATCTAGAC",8,61.35,10.56,-0.28,0.03,2.92,1.07,0,">1 nonsynonymous","L60I Q84V E141N",3
"lib2","SARS-CoV-2","CTGAGACACATACCGC",9,1.68,NA,NA,NA,NA,NA,NA,"stop","E10D F99M V115* A145F",4
"lib2","SARS-CoV-2","CTGAGACATACCGAAT",10,21.17,6.12,-4.71,0.69,1.5,1.19,0.02,">1 nonsynonymous","A22V C31Y F62Q P96C N151I",5
"lib2","SARS-CoV-2","CTGAGACTATGCCAAC",11,269.55,10.86,0.03,0.04,2.9,1.1,0,"1 nonsynonymous","L122F",1
"lib2","SARS-CoV-2","CTGAGAGATAGACAAA",4,79.73,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K26L C61N N107D R136W",4
"lib2","SARS-CoV-2","CTGAGAGTGAACGCAT",1,10.07,7.16,-3.68,0.4,1.71,1.15,0.04,">1 nonsynonymous","S19L S139R",2
"lib2","SARS-CoV-2","CTGAGATAAGAGAGAT",1,13.47,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L95N D98N",2
"lib2","SARS-CoV-2","CTGAGATTTCACTGTT",1,45.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38T V103W Y119C",3
"lib2","SARS-CoV-2","CTGAGCAAAAGTTCAA",9,1.83,NA,NA,NA,NA,NA,NA,"stop","D59I W106S R127A N157* G166* K198T",6
"lib2","SARS-CoV-2","CTGAGCAAATCACGAT",14,190.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D90S D98T Y121T G155Y",4
"lib2","SARS-CoV-2","CTGAGCAATAGCCGAA",5,23.06,6,-4.84,1.09,3,1.14,0.01,">1 nonsynonymous","L5M D68G P197S",3
"lib2","SARS-CoV-2","CTGAGCAATTAACCTC",3,46.17,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A42M K48W N130L I142S Y165S R179N H189Y P197D",8
"lib2","SARS-CoV-2","CTGAGCACTTTTGACC",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136N T148R F160P",3
"lib2","SARS-CoV-2","CTGAGCATGAAGAGCT",3,43.8,6.2,-4.63,0.48,1.5,1.16,0.01,">1 nonsynonymous","D68E G117A",2
"lib2","SARS-CoV-2","CTGAGCATGCGACAAA",5,77,8.89,-1.95,0.07,2.87,1.11,0,">1 nonsynonymous","N110V G117E",2
"lib2","SARS-CoV-2","CTGAGCATTATTGACC",5,17.31,10.62,-0.22,0.12,2.78,1.1,0.01,">1 nonsynonymous","F17Y I28L S129H",3
"lib2","SARS-CoV-2","CTGAGCCGGTCAAGCG",10,87.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4L S19V G86M",3
"lib2","SARS-CoV-2","CTGAGCCGTTAAAACA",4,33.32,9.64,-1.19,0.11,1.94,1.07,0.01,">1 nonsynonymous","C6R V11M W106M F134W",4
"lib2","SARS-CoV-2","CTGAGCGCCTGTACAC",25,206.7,9.91,-0.92,0.05,2.19,1.03,0,">1 nonsynonymous","N40I S129I",2
"lib2","SARS-CoV-2","CTGAGCTCCATTTTGA",1,20.5,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S41R W106R T140I P177S K198N",5
"lib2","SARS-CoV-2","CTGAGCTCTCGAATTT",4,0.27,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","CTGAGGAAAGAGAGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N4F A14M S19P F62* A105L V115I D137M P149G F156S",9
"lib2","SARS-CoV-2","CTGAGGAACCACTAAC",1,80.92,10.28,-0.56,0.03,2.98,1.01,0,">1 nonsynonymous","P169M T201R",2
"lib2","SARS-CoV-2","CTGAGGAACTCATCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43M T140H V173F A192*",4
"lib2","SARS-CoV-2","CTGAGGAAGTCTCCGT",4,40.39,10.81,-0.03,0.07,2.96,1.07,0,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","CTGAGGACCACGACCA",1,21.88,10.64,-0.2,0.18,2.76,1.07,0.02,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","CTGAGGACTAATTAAA",6,27.83,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","G146L L183T",2
"lib2","SARS-CoV-2","CTGAGGAGAATTAACT",2,42.15,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y35P K56C E76S G116H",4
"lib2","SARS-CoV-2","CTGAGGAGTTAATGAT",3,33.74,8.57,-2.27,0.11,2.22,1.07,0.01,">1 nonsynonymous","G146H Q176M",2
"lib2","SARS-CoV-2","CTGAGGCGTAATACCT",5,46.99,9.81,-1.03,0.09,2.17,1.05,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","CTGAGGCTAGTAATGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K D90N Y121P",3
"lib2","SARS-CoV-2","CTGAGGCTGTAAACGA",5,51.99,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D68G D75A D112P F167L",4
"lib2","SARS-CoV-2","CTGAGGGCGCTCCAAA",2,46.13,10.55,-0.29,0.04,2.86,1.13,0,">1 nonsynonymous","I2L V37G V52Y",3
"lib2","SARS-CoV-2","CTGAGGTCAAAGGACA",6,95.97,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y39A D112K",2
"lib2","SARS-CoV-2","CTGAGGTGGTAACTTT",4,17.55,10.79,-0.05,0.07,3,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGAGGTTCTAATTGA",2,2.26,NA,NA,NA,NA,NA,NA,"stop","I28* Q176E",2
"lib2","SARS-CoV-2","CTGAGTAAAATATCAA",4,1.02,NA,NA,NA,NA,NA,NA,"stop","V37S N130L E141S Y159*",4
"lib2","SARS-CoV-2","CTGAGTATAATAAAAG",6,66.59,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S41T G86R N110H Y119G",4
"lib2","SARS-CoV-2","CTGAGTATAGAACGAA",7,108.29,10.51,-0.32,0.05,2.87,1.05,0,">1 nonsynonymous","A18T N64Y E141N",3
"lib2","SARS-CoV-2","CTGAGTATATCATAGG",2,44.42,10.8,-0.03,0.05,2.99,1.02,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","CTGAGTATATGCAACC",6,161.42,10.31,-0.53,0.03,2.92,1.04,0,">1 nonsynonymous","T100Y E141G P149I G196P",4
"lib2","SARS-CoV-2","CTGAGTCCTATCACAG",5,105.84,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T100C A105M C158A",3
"lib2","SARS-CoV-2","CTGAGTGCGTTAACAG",7,42.72,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D90T N120P P133H",3
"lib2","SARS-CoV-2","CTGAGTGCTAAACGTA",2,18.28,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D34G L60K Y93C G101I P149M",5
"lib2","SARS-CoV-2","CTGAGTTCACAGAAAG",1,106.2,10.75,-0.09,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGAGTTGGAACATAA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","CTGAGTTTTTCTCAAG",1,48.31,10.16,-0.68,0.06,2.57,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGATAAAAAAATCAA",2,110.8,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N92R D97K E154R",3
"lib2","SARS-CoV-2","CTGATAAAAATACTCG",8,1.86,NA,NA,NA,NA,NA,NA,"stop","D59M D68* P96N Y119C S164D S184V A190S",7
"lib2","SARS-CoV-2","CTGATAAATACAGAAA",4,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V P7Q G101Y",3
"lib2","SARS-CoV-2","CTGATAACGATGTTAG",17,4.19,NA,NA,NA,NA,NA,NA,"stop","C49* K198L",2
"lib2","SARS-CoV-2","CTGATAAGTCATTTCA",3,37.1,10.86,0.02,0.07,2.95,1.02,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","CTGATAATACTGGGAA",5,82.2,10.66,-0.18,0.04,2.97,1.03,0,">1 nonsynonymous","S53L C61G",2
"lib2","SARS-CoV-2","CTGATAATGTTTGAAG",2,13.79,9.78,-1.05,0.14,2.39,1,0.01,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","CTGATAATTAAGCCAT",5,25.97,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","S19Y P96A",2
"lib2","SARS-CoV-2","CTGATACATCAGTGGT",4,0.99,NA,NA,NA,NA,NA,NA,"stop","N109R Y121* G174R",3
"lib2","SARS-CoV-2","CTGATACCAAAACATA",2,17.59,9.51,-1.32,0.1,2.1,1.04,0,">1 nonsynonymous","K87Y V103L",2
"lib2","SARS-CoV-2","CTGATACCAGTGTAGG",4,25.17,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S41V V52I G86S L111R I142Y",5
"lib2","SARS-CoV-2","CTGATACCCTCACTCA",10,107.69,9.36,-1.48,0.18,1.5,1,0.02,">1 nonsynonymous","T15E T85L D98K F134S",4
"lib2","SARS-CoV-2","CTGATACGCGATTACA",16,94.3,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S45P C49G",2
"lib2","SARS-CoV-2","CTGATACGTAACACAA",2,7.92,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S29Q V103N D112L Y121T",4
"lib2","SARS-CoV-2","CTGATACGTTATCGTA",2,11.5,10.64,-0.2,0.1,2.87,1.15,0.01,">1 nonsynonymous","T170S P197N",2
"lib2","SARS-CoV-2","CTGATACTATGTTGAG",3,21.85,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","D112P E135P",2
"lib2","SARS-CoV-2","CTGATACTCCAGCATT",1,17.36,10.52,-0.32,0.08,2.99,1,0,">1 nonsynonymous","D34S T55W T201R",3
"lib2","SARS-CoV-2","CTGATACTCTAACACC",1,18.4,6.08,-4.76,1.49,1.5,1.2,0.06,">1 nonsynonymous","N4L A105P I142M",3
"lib2","SARS-CoV-2","CTGATACTTTGGTAAT",6,17.84,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","G9R D59L W106N",3
"lib2","SARS-CoV-2","CTGATAGCTATAGTGC",10,191.19,9.23,-1.6,0.07,2.32,1.06,0,">1 nonsynonymous","S41L P161G",2
"lib2","SARS-CoV-2","CTGATAGCTTAGTAAG",1,19.08,10.53,-0.31,0.1,2.79,1.13,0,"1 nonsynonymous","W106F",1
"lib2","SARS-CoV-2","CTGATAGCTTTATCGA",14,209.62,8.49,-2.35,0.17,1.5,1.08,0.01,">1 nonsynonymous","K26G V37H E135Y",3
"lib2","SARS-CoV-2","CTGATAGGCTCTACCT",2,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C A42L F99P L125Q T148R L162D",6
"lib2","SARS-CoV-2","CTGATAGTTTACAAAC",1,14.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S S69M",2
"lib2","SARS-CoV-2","CTGATATAGGCCCTAG",11,5.51,9,-1.84,0.39,2.65,1.33,0.06,">1 nonsynonymous","I2G T46R A81Y E141R",4
"lib2","SARS-CoV-2","CTGATATATCTCTATC",8,36.46,6.07,-4.76,1.39,1.5,1.18,0.03,">1 nonsynonymous","G101V S129H T201S",3
"lib2","SARS-CoV-2","CTGATATCCAGTTCTA",5,23.65,6.99,-3.85,0.29,1.5,1.04,0.02,"1 nonsynonymous","L162D",1
"lib2","SARS-CoV-2","CTGATATTCAGGGAAG",3,64.67,10.82,-0.02,0.06,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGATCAAAAGTGGGG",6,98.61,10.88,0.04,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGATCAAAATATAGG",10,90.79,10.03,-0.81,0.06,2.71,1.07,0,">1 nonsynonymous","C6R C61K",2
"lib2","SARS-CoV-2","CTGATCAACGCTATGC",1,9.49,10.83,0,0.08,2.93,1.06,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","CTGATCAGAGAAAATA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTGATCAGAGGCTCAC",4,41.27,9.59,-1.24,0.18,1.81,1.08,0.01,">1 nonsynonymous","A42T V103L",2
"lib2","SARS-CoV-2","CTGATCATTAAATTAG",4,39.68,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V52L D112Q",2
"lib2","SARS-CoV-2","CTGATCATTTGTAATC",4,55.08,7.51,-3.33,0.2,1.5,1.09,0.01,">1 nonsynonymous","I2L F12G S29G K87C",4
"lib2","SARS-CoV-2","CTGATCCAAATTATCG",2,32.53,10.61,-0.23,0.06,3,1,0,"1 nonsynonymous","S43N",1
"lib2","SARS-CoV-2","CTGATCCAACCACTAG",1,1.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31L",1
"lib2","SARS-CoV-2","CTGATCCACGGAAAAC",1,27.45,10.84,0,0.08,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGATCCATATGCCCT",6,175.94,10.24,-0.59,0.07,2.64,1.01,0,">1 nonsynonymous","G9A D98W I138L P149H E154S",5
"lib2","SARS-CoV-2","CTGATCCATATTTGTT",14,47.91,7.45,-3.38,0.44,1.5,1.21,0.05,">1 nonsynonymous","P7L F12L V20T V71L K87T",5
"lib2","SARS-CoV-2","CTGATCCCAAACAAAA",6,47.68,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R73L F99A S108P P149Y",4
"lib2","SARS-CoV-2","CTGATCCTATCCAACA",3,8.06,6.28,-4.55,0.93,1.5,1.13,0.03,">1 nonsynonymous","I28R V181S",2
"lib2","SARS-CoV-2","CTGATCGCACCACAAA",7,26.14,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","C49H T85F G117V",3
"lib2","SARS-CoV-2","CTGATCGCACCATAAA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","P133W R136* E141S V181M",4
"lib2","SARS-CoV-2","CTGATCGGTTTTAAAG",4,41.43,8.64,-2.19,0.29,1.5,1.06,0.05,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","CTGATCGTGACTCGTT",3,79.79,10.85,0.01,0.04,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGATCTAACCTACTA",8,7.14,NA,NA,NA,NA,NA,NA,"stop","A14* V37* T85S F134S",4
"lib2","SARS-CoV-2","CTGATCTCCCGACAAA",2,38.08,10.35,-0.49,0.07,2.88,1.12,0,">1 nonsynonymous","N4C L60R",2
"lib2","SARS-CoV-2","CTGATCTTGACACACA",3,9.01,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","I2D L60C G86F N118A",4
"lib2","SARS-CoV-2","CTGATCTTTGAGCTTA",7,17.56,6.56,-4.28,0.76,1.54,1.3,0.04,">1 nonsynonymous","L5G A14T D137T",3
"lib2","SARS-CoV-2","CTGATGAAACACTTAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C Y175T",2
"lib2","SARS-CoV-2","CTGATGAAATGAATGA",11,74.98,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F70L R127Q G152N Q168T",4
"lib2","SARS-CoV-2","CTGATGACAGTTAGGG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G D98Y R136L",3
"lib2","SARS-CoV-2","CTGATGACCTAAGGAA",7,178.3,10.67,-0.17,0.05,2.79,1.06,0,">1 nonsynonymous","P54T F160P",2
"lib2","SARS-CoV-2","CTGATGAGACTTATAC",12,146.2,9.38,-1.46,0.07,1.68,1.06,0,">1 nonsynonymous","P7T F99L S129N S147I S200F",5
"lib2","SARS-CoV-2","CTGATGAGTTTCGAAT",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q Y143T",2
"lib2","SARS-CoV-2","CTGATGCAAGATGCCT",5,23.9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51I E76L I88R Y175D",4
"lib2","SARS-CoV-2","CTGATGCCGAACTACC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","K94Y A105* G116Q",3
"lib2","SARS-CoV-2","CTGATGCGAAGCAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E P169T T201V",3
"lib2","SARS-CoV-2","CTGATGCTTTTGACCT",2,7.81,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","G74Y A89T G146I L183F",4
"lib2","SARS-CoV-2","CTGATGGCATAGCCAG",15,7.56,NA,NA,NA,NA,NA,NA,"stop","G51* D59V I88T Y159A",4
"lib2","SARS-CoV-2","CTGATGGCCATTGATG",4,75.16,10.71,-0.12,0.06,2.89,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGATGGCGACAGCGC",4,0.13,NA,NA,NA,NA,NA,NA,"stop","D90* L131H",2
"lib2","SARS-CoV-2","CTGATGTATTCAGAGA",1,67.44,10.18,-0.66,0.07,2.8,1.06,0,">1 nonsynonymous","N1R C61L D90E",3
"lib2","SARS-CoV-2","CTGATGTCTGAGGCGA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","N40T C61* D98K A105Y Y143D G172T",6
"lib2","SARS-CoV-2","CTGATGTTAGCCAACG",4,21.58,8.28,-2.56,0.24,1.5,1.09,0.04,">1 nonsynonymous","S41C C49I N120E K132L",4
"lib2","SARS-CoV-2","CTGATGTTAGTACCGA",3,33.85,9.64,-1.19,0.07,2.2,1.06,0,">1 nonsynonymous","C6Y D90Y N130R",3
"lib2","SARS-CoV-2","CTGATTAAATTTTAAA",16,150.26,8.61,-2.22,0.08,2.84,1.08,0,">1 nonsynonymous","G83Y K87A N120T",3
"lib2","SARS-CoV-2","CTGATTAAGCTAGAAG",5,112.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R27L K48Y G86V G101F R136D Q163P",6
"lib2","SARS-CoV-2","CTGATTAGACTGCTCG",3,29.7,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","W23R V37C N64R P96F R127S",5
"lib2","SARS-CoV-2","CTGATTATATGAAATG",15,202.38,10.73,-0.11,0.03,2.97,1.06,0,">1 nonsynonymous","K132V T201N",2
"lib2","SARS-CoV-2","CTGATTATGACAACAT",1,21.01,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V52L L95T F99L N118S E141T N151F",6
"lib2","SARS-CoV-2","CTGATTATGTGTAAAG",19,112.35,10.86,0.02,0.08,2.86,1.08,0,">1 nonsynonymous","R16D V37K T201S",3
"lib2","SARS-CoV-2","CTGATTATTAACAAAG",21,290.51,10.5,-0.33,0.02,2.84,1.07,0,">1 nonsynonymous","A33I D97T",2
"lib2","SARS-CoV-2","CTGATTCATGAAATCC",9,72.57,8.64,-2.2,0.12,1.51,1.08,0.01,">1 nonsynonymous","N4V L162R",2
"lib2","SARS-CoV-2","CTGATTCCATGAGACT",12,175.62,6,-4.84,2,3,1.23,0,">1 nonsynonymous","V32E Y39S L60S A105N",4
"lib2","SARS-CoV-2","CTGATTCGGCATTCGA",8,7.59,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10S W106S L125D T140P E154D Y159V",6
"lib2","SARS-CoV-2","CTGATTCTACCTAAAG",2,13.89,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F12S D112W",2
"lib2","SARS-CoV-2","CTGATTGAAGGATGAG",5,41.7,10.56,-0.28,0.08,2.88,1.09,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","CTGATTGAATATTACC",2,51.31,10.13,-0.71,0.03,2.94,1.05,0,"1 nonsynonymous","P169Q",1
"lib2","SARS-CoV-2","CTGATTGAGTCAATCT",3,40.86,6.24,-4.6,1.09,1.5,1.22,0.04,">1 nonsynonymous","N4M C102S G166T L188Y",4
"lib2","SARS-CoV-2","CTGATTGATAGAACCG",4,37.73,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5M F47D T100Y I104L S147L",5
"lib2","SARS-CoV-2","CTGATTGCAATGACCT",9,133.15,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N40L D75K A89S K128P I142H N157T",6
"lib2","SARS-CoV-2","CTGATTTAAGAACCAC",2,35.12,9.25,-1.59,0.1,2.92,1.12,0,">1 nonsynonymous","N58D G166I",2
"lib2","SARS-CoV-2","CTGATTTACCCGGGGA",4,72.18,10.57,-0.26,0.06,2.89,1.09,0,">1 nonsynonymous","A33F E154S Y178R",3
"lib2","SARS-CoV-2","CTGATTTAGCCACACC",8,113.96,8.24,-2.59,0.09,2.29,1.13,0,">1 nonsynonymous","L125K S139F",2
"lib2","SARS-CoV-2","CTGCAAAAAACGGAGC",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y C61E D112G A192T",4
"lib2","SARS-CoV-2","CTGCAAAAACTCACAT",5,3.47,NA,NA,NA,NA,NA,NA,"stop","W106* S200D",2
"lib2","SARS-CoV-2","CTGCAAAACCCCTGCA",12,67.95,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N1S L5A V37A F99D",4
"lib2","SARS-CoV-2","CTGCAAAACGGCCGGT",5,111.4,10.94,0.11,0.07,2.91,1.08,0,"1 nonsynonymous","Y178H",1
"lib2","SARS-CoV-2","CTGCAAAAGTACCAAT",6,82.03,10.55,-0.29,0.04,2.95,1.01,0,">1 nonsynonymous","E10S D98E",2
"lib2","SARS-CoV-2","CTGCAAAATTTTAATT",12,112.69,10.83,-0.01,0.04,2.93,1.08,0,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","CTGCAAAGCGTATATA",9,135.37,10.33,-0.51,0.04,2.88,1.03,0,">1 nonsynonymous","Y39H I104T L122Y",3
"lib2","SARS-CoV-2","CTGCAAAGTAAACCTA",3,31.24,10.07,-0.77,0.1,2.65,1.02,0.01,">1 nonsynonymous","V77R T201R",2
"lib2","SARS-CoV-2","CTGCAAAGTCATTAGA",3,11.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28L C49H R136C",3
"lib2","SARS-CoV-2","CTGCAAATTAGAAAAA",2,11.66,9.69,-1.14,0.27,2.02,1.14,0.02,">1 nonsynonymous","C6G V11S",2
"lib2","SARS-CoV-2","CTGCAACAACTATATA",3,8.35,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9N P96R F185E",3
"lib2","SARS-CoV-2","CTGCAACAGTAACACC",7,11.09,6.73,-4.11,0.34,2.01,1.13,0.03,">1 nonsynonymous","C6V D90F G155E",3
"lib2","SARS-CoV-2","CTGCAACCAAGGACAA",1,35.25,10.46,-0.38,0.05,2.94,1.09,0,">1 nonsynonymous","E141Y Q163H",2
"lib2","SARS-CoV-2","CTGCAACCATACTAAA",4,17.08,7.79,-3.05,0.47,1.5,1.04,0.08,">1 nonsynonymous","A14H V103A",2
"lib2","SARS-CoV-2","CTGCAACCCATGGTAT",1,8.08,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","I2V A18M A42F P82S N92D A190Y",6
"lib2","SARS-CoV-2","CTGCAACGACACCATA",2,70.32,10.91,0.07,0.09,2.86,1.15,0,"1 nonsynonymous","F160N",1
"lib2","SARS-CoV-2","CTGCAACTATATATTA",2,8.61,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y123V P133T G174I",3
"lib2","SARS-CoV-2","CTGCAACTCTCCCATG",2,68.23,10.83,-0.01,0.06,2.94,1.09,0,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","CTGCAAGGTAATTTCC",7,41.38,6.1,-4.74,0.93,1.5,1.21,0.02,">1 nonsynonymous","F8R L122Y G174F",3
"lib2","SARS-CoV-2","CTGCAAGTATAGCATA",8,65.25,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D112K N130S",2
"lib2","SARS-CoV-2","CTGCAATAATACGTGA",3,78.01,9.54,-1.29,0.03,2.88,1.1,0,">1 nonsynonymous","N109F Q168A T201V",3
"lib2","SARS-CoV-2","CTGCAATAGATCCTCG",3,122.12,10.66,-0.17,0.02,2.9,1.11,0,"1 nonsynonymous","P191F",1
"lib2","SARS-CoV-2","CTGCAATAGTACTAAT",3,134.05,9.77,-1.07,0.03,2.94,1.07,0,">1 nonsynonymous","K48R F156G",2
"lib2","SARS-CoV-2","CTGCAATAGTTAAGTT",11,131.2,10.16,-0.68,0.04,2.9,1.02,0,">1 nonsynonymous","A33T K48N G116R",3
"lib2","SARS-CoV-2","CTGCAATTCTTCCAAA",8,49.42,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D90N Y178P",2
"lib2","SARS-CoV-2","CTGCACAACGAATCTT",2,31.31,9.07,-1.77,0.11,1.86,1.12,0.01,">1 nonsynonymous","F8R K199M",2
"lib2","SARS-CoV-2","CTGCACACTAAGAACC",3,72.74,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64D G86M S139G C150G K199M",5
"lib2","SARS-CoV-2","CTGCACAGAATCATTT",3,82.18,10.85,0.02,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCACAGACATAGAT",1,2.7,NA,NA,NA,NA,NA,NA,"stop","A18Q A105F V153* Q163M",4
"lib2","SARS-CoV-2","CTGCACAGAGGAGTCG",7,0.66,NA,NA,NA,NA,NA,NA,"stop","T3P F62K D68* Y121A",4
"lib2","SARS-CoV-2","CTGCACATACGAAAAG",1,5.45,10.78,-0.05,0.09,3,1.03,0,">1 nonsynonymous","K56A L187S",2
"lib2","SARS-CoV-2","CTGCACCTGTGCGGGA",7,112.05,7.23,-3.61,0.28,1.5,1.13,0.02,">1 nonsynonymous","Y21R L38I",2
"lib2","SARS-CoV-2","CTGCACCTTGAACTTG",5,34.65,9.78,-1.06,0.07,3,1.02,0,">1 nonsynonymous","S41A L125S G152S",3
"lib2","SARS-CoV-2","CTGCACGACTAAACTC",6,29.55,8.11,-2.73,0.39,1.5,1.13,0.07,">1 nonsynonymous","P96F E141C",2
"lib2","SARS-CoV-2","CTGCACGCGCAAAGGC",8,23.62,7.48,-3.36,0.42,1.5,1.05,0.07,">1 nonsynonymous","Y66G P96L",2
"lib2","SARS-CoV-2","CTGCACTAAAACTAAA",5,181.72,9.66,-1.18,0.05,2.09,1.04,0,">1 nonsynonymous","V37Q Y178K",2
"lib2","SARS-CoV-2","CTGCACTGGTCAGGTA",4,7.7,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49A N118Y V153W",3
"lib2","SARS-CoV-2","CTGCACTTAACTATGA",6,98.15,9.8,-1.04,0.04,2.9,1.05,0,">1 nonsynonymous","L5T C61W T85S P169Y",4
"lib2","SARS-CoV-2","CTGCAGAACATCATCA",3,9,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","C150S",1
"lib2","SARS-CoV-2","CTGCAGACTCTTTATT",3,171.89,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I80E K128F C150R Q176G A190D",5
"lib2","SARS-CoV-2","CTGCAGAGAATTAATA",7,0,NA,NA,NA,NA,NA,NA,"stop","R25* Q84R K199N",3
"lib2","SARS-CoV-2","CTGCAGATATTAGAAG",6,3.36,NA,NA,NA,NA,NA,NA,"stop","F44W T63V A81G K114* Y121V S139F G172T",7
"lib2","SARS-CoV-2","CTGCAGATGCAACCAA",1,10.73,10.75,-0.09,0.05,3,1.01,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","CTGCAGCATGTGCATC",1,6.13,10.71,-0.13,0.17,3,1.06,0.01,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","CTGCAGCCAGTACCAA",9,20.62,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9Q S53L G101D",3
"lib2","SARS-CoV-2","CTGCAGCCAGTCACGG",10,30.06,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9Q S41Y C61D I80R",4
"lib2","SARS-CoV-2","CTGCAGCTAAAAAAAT",3,96.11,10.68,-0.16,0.07,2.78,1.16,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","CTGCAGGTCTATGACT",5,183.42,10.6,-0.23,0.03,2.93,1.07,0,">1 nonsynonymous","A33S L122E",2
"lib2","SARS-CoV-2","CTGCATAAAAGTCACA",4,7.65,9.93,-0.91,0.19,1.92,1.27,0.02,">1 nonsynonymous","Y21W D34T",2
"lib2","SARS-CoV-2","CTGCATACACACGGAT",6,9.96,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T3S C102L Y123M S129M E141G P149Y",6
"lib2","SARS-CoV-2","CTGCATACCCCATAAT",7,56.36,9.17,-1.67,0.14,1.66,1.09,0.01,">1 nonsynonymous","N4S C31Q L57N",3
"lib2","SARS-CoV-2","CTGCATACTGGCGAGG",8,57.55,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12T Y35W F99K",3
"lib2","SARS-CoV-2","CTGCATAGAATTAAGC",3,49.57,10.15,-0.68,0.07,2.8,1.09,0,"1 nonsynonymous","T46G",1
"lib2","SARS-CoV-2","CTGCATAGTTCCTACA",5,44.04,10.88,0.04,0.07,2.95,1.06,0,">1 nonsynonymous","Y35L L57I",2
"lib2","SARS-CoV-2","CTGCATATAGCGCTTG",10,3.71,NA,NA,NA,NA,NA,NA,"stop","F44W S147W G152*",3
"lib2","SARS-CoV-2","CTGCATCCAAATAAGA",5,69.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F134R Y143I G152V",3
"lib2","SARS-CoV-2","CTGCATCCATCAGTAC",6,101.78,10.86,0.02,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCATCCCTATTAAA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","S19R N92* F160L",3
"lib2","SARS-CoV-2","CTGCATCCTCGTCGAT",5,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57R V71A C102R V173N S184K",5
"lib2","SARS-CoV-2","CTGCATCGCTCCATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8Y C61G W106* G166*",4
"lib2","SARS-CoV-2","CTGCATCTACAAAATG",9,41.85,9.04,-1.79,0.09,2.89,1.12,0,">1 nonsynonymous","I142Y E154L",2
"lib2","SARS-CoV-2","CTGCATGATTTCGGGG",8,7.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15H F47S L60H L95A I104V",5
"lib2","SARS-CoV-2","CTGCATGCGAGACAAG",4,79.34,10.82,-0.02,0.06,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCATTCTTCCAAAC",7,161.17,10.07,-0.76,0.05,2.8,1.06,0,">1 nonsynonymous","T63L G116N T140I",3
"lib2","SARS-CoV-2","CTGCATTGAACAAACA",3,0.64,NA,NA,NA,NA,NA,NA,"stop","F8* L38T",2
"lib2","SARS-CoV-2","CTGCATTTAGTAGTCT",4,111.45,10.71,-0.12,0.05,2.99,1.03,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","CTGCCAAAATACGGAC",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T L60Q Y91T D98S",4
"lib2","SARS-CoV-2","CTGCCAAACCAAATTT",6,133.34,10.59,-0.25,0.06,2.86,1.06,0,"1 nonsynonymous","A67C",1
"lib2","SARS-CoV-2","CTGCCAACCCGAACAC",1,26.88,6.98,-3.85,0.42,1.5,1.23,0.05,">1 nonsynonymous","A22K V37Y A67S N107S V115Y E141N",6
"lib2","SARS-CoV-2","CTGCCAAGCCTCGCCA",7,61.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8L I138E R179P T201E",4
"lib2","SARS-CoV-2","CTGCCAATTGGACATT",2,39.93,9.13,-1.71,0.18,1.61,1.07,0.01,">1 nonsynonymous","F8R T46L",2
"lib2","SARS-CoV-2","CTGCCACCAATGAAAA",10,157.8,8.53,-2.31,0.1,2.05,1.09,0,">1 nonsynonymous","N64T G74K I138P",3
"lib2","SARS-CoV-2","CTGCCACTACAAAATA",6,113.31,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L60Y A81N A89S W106F D112E K128N G152Y",7
"lib2","SARS-CoV-2","CTGCCAGCAATTCGGC",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98V A105G T170V",3
"lib2","SARS-CoV-2","CTGCCAGCGGTAATCC",2,27.83,10.66,-0.18,0.05,2.99,1.01,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","CTGCCAGGAACACTGC",1,34.78,8.94,-1.9,0.07,2.94,1.02,0,"1 nonsynonymous","Y143E",1
"lib2","SARS-CoV-2","CTGCCAGGTCTAACTA",2,34.47,8.98,-1.85,0.12,2.21,1.18,0.01,"1 nonsynonymous","F17K",1
"lib2","SARS-CoV-2","CTGCCATATACACTAA",5,34.14,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N64G D90P V103T V153M",4
"lib2","SARS-CoV-2","CTGCCATTCTAACCTA",7,58.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86A Y123A S129F Q144L",4
"lib2","SARS-CoV-2","CTGCCCAAAACTCAGG",2,31.18,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I104C C150W K199Q",3
"lib2","SARS-CoV-2","CTGCCCAATCATTCCA",2,25.23,8.15,-2.68,0.17,1.8,1.14,0.01,">1 nonsynonymous","R25W A33Y T63L N171S",4
"lib2","SARS-CoV-2","CTGCCCACAACATTTG",4,0,NA,NA,NA,NA,NA,NA,"stop","W23M Q144N V153* T201R",4
"lib2","SARS-CoV-2","CTGCCCACTTTTCAAA",1,21.16,8.03,-2.81,0.17,1.67,1.06,0.01,">1 nonsynonymous","P96A P177A P191I",3
"lib2","SARS-CoV-2","CTGCCCAGTATGCAAT",9,179.86,9.14,-1.7,0.04,2.85,1.12,0,">1 nonsynonymous","N64D N157G",2
"lib2","SARS-CoV-2","CTGCCCATGAAGTGAT",7,7.97,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","A33S A42P C61H I88N P169H",5
"lib2","SARS-CoV-2","CTGCCCCATATGTGCG",6,27.12,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T55K V103F G116Y",3
"lib2","SARS-CoV-2","CTGCCCGACTATACCT",4,57.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9P F62C G86N Q168R L187Y",5
"lib2","SARS-CoV-2","CTGCCCTGTGCATACA",1,0.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92K",1
"lib2","SARS-CoV-2","CTGCCGAAACACAAAA",2,31.18,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N40T L57M F99L V103L",4
"lib2","SARS-CoV-2","CTGCCGACGTCCCCGT",10,80.87,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V77E P82I",2
"lib2","SARS-CoV-2","CTGCCGATGATATAAT",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y D59S D98F A105L E135V",5
"lib2","SARS-CoV-2","CTGCCGCACGTAAGCA",7,56.41,9.96,-0.88,0.09,2.45,1.02,0,">1 nonsynonymous","E10L D98F",2
"lib2","SARS-CoV-2","CTGCCGTTATTATAAG",3,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S T100D L162A",3
"lib2","SARS-CoV-2","CTGCCTAAAAAATCTG",5,63.23,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37S L95P N107T N130R T201K",5
"lib2","SARS-CoV-2","CTGCCTAAACACGTTA",6,93.11,9.66,-1.17,0.05,2.83,1.02,0,">1 nonsynonymous","E10M S53V T148R G174T L187K",5
"lib2","SARS-CoV-2","CTGCCTAATAACAAAG",4,50.45,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F8E T85S D112R S129V",4
"lib2","SARS-CoV-2","CTGCCTACCTATCTCC",7,1.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157R",1
"lib2","SARS-CoV-2","CTGCCTAGGTAGTAGC",3,7.43,NA,NA,NA,NA,NA,NA,"stop","Y35I S43F K56M Y165*",4
"lib2","SARS-CoV-2","CTGCCTAGTATGCGTT",7,0.93,NA,NA,NA,NA,NA,NA,"stop","K56* F185D",2
"lib2","SARS-CoV-2","CTGCCTATAACATTCA",4,92.13,10.35,-0.49,0.03,2.93,1.07,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CTGCCTATGTATGATA",5,20.51,8.91,-1.93,0.21,1.9,1.17,0.03,">1 nonsynonymous","N4P F44M I104S",3
"lib2","SARS-CoV-2","CTGCCTCACAATTGTA",3,32.55,10.67,-0.16,0.08,2.94,1.06,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","CTGCCTGCAGGATCTC",5,157.29,10.82,-0.02,0.06,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCCTGCTCAAAAAC",7,36.72,6.48,-4.36,0.34,1.5,1.03,0.01,">1 nonsynonymous","F12E N40S N58C Y93K T201R",5
"lib2","SARS-CoV-2","CTGCGAAATATTTACT",5,46.36,10.83,-0.01,0.03,2.94,1.07,0,">1 nonsynonymous","N40S T201W",2
"lib2","SARS-CoV-2","CTGCGAACGGATTACC",1,8.4,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F44M T100H A105P E154R",4
"lib2","SARS-CoV-2","CTGCGAATGTTGGGCA",6,15.03,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A33K P96T I104T F160T",4
"lib2","SARS-CoV-2","CTGCGACGAAAGTAAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","N30A N64D P96* S147* E154R",5
"lib2","SARS-CoV-2","CTGCGACGCACCCTCC",12,108.03,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N58C A89R L131M N151C F160V P169T",6
"lib2","SARS-CoV-2","CTGCGACTGAAGTATT",2,82.11,10.09,-0.75,0.06,2.52,1.11,0,">1 nonsynonymous","P133N T148A",2
"lib2","SARS-CoV-2","CTGCGATTACAGACCT",3,38.87,10.92,0.08,0.09,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCGCAACAAATTTT",5,62.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R124K L131M F167A",3
"lib2","SARS-CoV-2","CTGCGCAATGGTACAT",2,4.97,NA,NA,NA,NA,NA,NA,"stop","W106G N151T F167* K199S",4
"lib2","SARS-CoV-2","CTGCGCCTGACCTAAA",2,0.81,NA,NA,NA,NA,NA,NA,"stop","W23L A33V Y39P N64L D90R F99T W106* S139I",8
"lib2","SARS-CoV-2","CTGCGCTAAACGTATA",6,179.73,7.04,-3.8,0.18,1.83,1.16,0.01,"1 nonsynonymous","C158M",1
"lib2","SARS-CoV-2","CTGCGCTAGACATCTG",6,57.07,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","K26Q S36R D59Q P177V S200Q",5
"lib2","SARS-CoV-2","CTGCGGAAGGCAACCC",8,206.29,10.63,-0.21,0.04,2.88,1.1,0,">1 nonsynonymous","S41T Y66F D90S S200H",4
"lib2","SARS-CoV-2","CTGCGGATTTTTCATA",3,48.33,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T3Y A105L T140G T148M Y178S",5
"lib2","SARS-CoV-2","CTGCGGTAAATGGACA",8,127.15,10,-0.84,0.08,2.49,1.05,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","CTGCGGTAACTAGTAT",5,96.15,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2K G9A V37M V52C Y93R G146K",6
"lib2","SARS-CoV-2","CTGCGGTCAGCCCATC",7,64.09,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C49G V77W F126C Q168V",4
"lib2","SARS-CoV-2","CTGCGTACAACGATAT",1,54.51,7.78,-3.05,0.2,1.61,1.04,0.01,">1 nonsynonymous","P7K Q176I",2
"lib2","SARS-CoV-2","CTGCGTACATCATAGC",11,112.5,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y50A A81V N157M",3
"lib2","SARS-CoV-2","CTGCGTACTATAAGCC",11,4.35,NA,NA,NA,NA,NA,NA,"stop","F17C Q84* P96L F167N",4
"lib2","SARS-CoV-2","CTGCGTATGGGAAATT",1,5.43,9.95,-0.88,0.33,2.76,1.16,0.03,"1 nonsynonymous","C102L",1
"lib2","SARS-CoV-2","CTGCGTCCTTCTATCC",5,51.57,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35T E76G R136G",3
"lib2","SARS-CoV-2","CTGCGTGAAAATATTG",1,28.51,10.42,-0.42,0.05,2.81,1.22,0,">1 nonsynonymous","S29H A42T K128C",3
"lib2","SARS-CoV-2","CTGCGTGCCAAGTAAA",3,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30S F99E Q163H",3
"lib2","SARS-CoV-2","CTGCGTTACACGAAAT",8,73.41,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","F99R G155Y",2
"lib2","SARS-CoV-2","CTGCGTTGAATTATAA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K D90F D97L N151T F185P",5
"lib2","SARS-CoV-2","CTGCTAAAAACTCATC",6,58.7,9.19,-1.65,0.08,2.92,1.11,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","CTGCTAAACTACTAAC",11,123.64,6.08,-4.75,0.7,1.5,1.12,0.01,">1 nonsynonymous","D34N V37G F70T T100P",4
"lib2","SARS-CoV-2","CTGCTAAAGCTCCGCG",7,77.58,10.69,-0.15,0.09,2.81,1.04,0,">1 nonsynonymous","P54N T201S",2
"lib2","SARS-CoV-2","CTGCTAAATGTTCTAA",5,73.66,9.64,-1.2,0.09,2.71,1.04,0,">1 nonsynonymous","I142K T148R",2
"lib2","SARS-CoV-2","CTGCTAACATTCAAAC",7,110.89,8.53,-2.31,0.13,1.7,1.09,0.01,"1 nonsynonymous","R127C",1
"lib2","SARS-CoV-2","CTGCTAACTGAGAACT",1,11.93,9.25,-1.58,0.19,2.02,1.05,0.01,">1 nonsynonymous","Y35G C61N Y121K T201K",4
"lib2","SARS-CoV-2","CTGCTAAGACGAATCA",7,35.42,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C61I Y93L A190I",3
"lib2","SARS-CoV-2","CTGCTAAGATCATAAT",1,22.12,8.12,-2.71,0.19,2.01,1.11,0.02,">1 nonsynonymous","N13F Y159I",2
"lib2","SARS-CoV-2","CTGCTAAGTTCTAATG",4,14.43,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","L57P A89Y",2
"lib2","SARS-CoV-2","CTGCTACATATACGCT",7,123.82,10.41,-0.42,0.03,2.9,1.07,0,"1 nonsynonymous","P169L",1
"lib2","SARS-CoV-2","CTGCTACCCACCCCGA",13,140.98,6,-4.84,1.06,1.5,1.16,0.01,">1 nonsynonymous","F12N C49T",2
"lib2","SARS-CoV-2","CTGCTACTAATGCACT",1,7.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6S Y93G",2
"lib2","SARS-CoV-2","CTGCTAGAAAGAGCTG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","F44* C49M I88S K114L Y159R",5
"lib2","SARS-CoV-2","CTGCTAGCACCTGAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","W23* F62L D98S Y121A",4
"lib2","SARS-CoV-2","CTGCTAGTATAACTTG",6,35.88,7.17,-3.67,0.32,1.5,1.15,0.02,">1 nonsynonymous","L57A V181A",2
"lib2","SARS-CoV-2","CTGCTATCCACAAGAT",8,193.58,9.99,-0.85,0.09,2.34,1.04,0,"1 nonsynonymous","G51F",1
"lib2","SARS-CoV-2","CTGCTATGTACATTTA",4,24.27,9.54,-1.3,0.11,2.79,1.06,0.01,">1 nonsynonymous","S36R T140P Y175H",3
"lib2","SARS-CoV-2","CTGCTATTAGGGGCTT",6,180.98,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","W23K F167R P177S",3
"lib2","SARS-CoV-2","CTGCTCAAACAAAAAA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","N4F F12E S45*",3
"lib2","SARS-CoV-2","CTGCTCAACAACGAAA",3,47.03,10.82,-0.02,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCTCAATGACTATA",2,41,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F12T N107L Y159R",3
"lib2","SARS-CoV-2","CTGCTCCAACTATGTA",4,35.5,6.58,-4.26,0.56,1.5,1.2,0.03,">1 nonsynonymous","K48A N92G",2
"lib2","SARS-CoV-2","CTGCTCCAGCCAACCA",1,2.79,NA,NA,NA,NA,NA,NA,"stop","P149* Q176L",2
"lib2","SARS-CoV-2","CTGCTCCCTATGATAA",11,86.64,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14N V77R K128R F134K G146S",5
"lib2","SARS-CoV-2","CTGCTCGAAAGACTAT",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128V T201Y",2
"lib2","SARS-CoV-2","CTGCTCGCCATCTAAG",1,8.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50F V77F",2
"lib2","SARS-CoV-2","CTGCTCGCTATAACCT",1,8.08,10.1,-0.74,0.11,2.33,1,0.01,">1 nonsynonymous","S45L S53M",2
"lib2","SARS-CoV-2","CTGCTCGTCCCCTAAC",3,44.84,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T100V I104C G172F",3
"lib2","SARS-CoV-2","CTGCTCTCACTAAGGG",2,9.9,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F17R G86E E135L",3
"lib2","SARS-CoV-2","CTGCTGAAAATCCTAC",2,7,10.8,-0.03,0.1,2.94,1.13,0,">1 nonsynonymous","N130A F160S P197R",3
"lib2","SARS-CoV-2","CTGCTGAAGTGGAACG",2,38.06,10.74,-0.09,0.08,2.84,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCTGACCGTCCAAT",11,91.4,9.72,-1.12,0.09,1.81,1.08,0,">1 nonsynonymous","S43M N58S A105H",3
"lib2","SARS-CoV-2","CTGCTGATATCCCCAT",8,81.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36C G101H Y119G",3
"lib2","SARS-CoV-2","CTGCTGCAAATATTGT",6,43.15,10.82,-0.02,0.06,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCTGCACGAACACC",1,10.94,6.93,-3.91,0.7,3,1.08,0.03,">1 nonsynonymous","I80G G86V C195F",3
"lib2","SARS-CoV-2","CTGCTGCGAGATACCA",1,6.74,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N107Y N130W G152L N157T",4
"lib2","SARS-CoV-2","CTGCTGCGCAAATGAT",1,0.95,NA,NA,NA,NA,NA,NA,"stop","A14M N109* N151K",3
"lib2","SARS-CoV-2","CTGCTGGAGGTTCATA",16,209.93,10.54,-0.29,0.04,2.91,1.07,0,">1 nonsynonymous","R16Y R27W",2
"lib2","SARS-CoV-2","CTGCTGGGCGTAGATA",4,46.39,9.28,-1.56,0.15,1.72,1.08,0.01,">1 nonsynonymous","L5R S69D L187D",3
"lib2","SARS-CoV-2","CTGCTGGTACATAAGG",2,44.97,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","K48S C61T V71N G146N Q176G",5
"lib2","SARS-CoV-2","CTGCTGGTCAAAATAA",4,20.77,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","R25Q P82L D97Y A192R K198R",5
"lib2","SARS-CoV-2","CTGCTTATAAGGGAAT",3,2.33,NA,NA,NA,NA,NA,NA,"stop","L38* Q84* D90L N120V",4
"lib2","SARS-CoV-2","CTGCTTATACTTAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","I2* G9Q F44S",3
"lib2","SARS-CoV-2","CTGCTTCGCTGCCAGT",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N K48F T170F",3
"lib2","SARS-CoV-2","CTGCTTGAACACACTC",1,38.84,10.84,0.01,0.07,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCTTGGAGATGCTT",11,90.8,6,-4.84,1.49,1.5,1.24,0.02,">1 nonsynonymous","Y165E H189C",2
"lib2","SARS-CoV-2","CTGCTTGGGCCAAAAC",2,15.54,7.38,-3.45,0.24,1.77,1.08,0.02,">1 nonsynonymous","Y123S L131Y",2
"lib2","SARS-CoV-2","CTGCTTTATTTTAATA",2,48.51,10.5,-0.33,0.11,2.9,1.02,0.03,">1 nonsynonymous","F8M K26L F160Y",3
"lib2","SARS-CoV-2","CTGCTTTCCCATTACA",3,42.04,9.95,-0.89,0.17,2.48,1.19,0.01,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","CTGCTTTTAATTGCAA",12,151.07,10.85,0.01,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGCTTTTATATGCAG",3,18.55,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","T55N F62L Y123D T148V",4
"lib2","SARS-CoV-2","CTGGAAAAAAACGCTT",2,0.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","CTGGAAAACTTAATTC",4,57.19,10.85,0.01,0.06,2.89,1.08,0,"1 nonsynonymous","N110M",1
"lib2","SARS-CoV-2","CTGGAAAATATCTAAA",4,32.24,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","A89E N107L",2
"lib2","SARS-CoV-2","CTGGAAACAGTGAACA",10,169.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6D L95A R124M C150M Q176V",5
"lib2","SARS-CoV-2","CTGGAAACCATTAGTG",3,50.52,8.57,-2.27,0.09,3,1.07,0,">1 nonsynonymous","A42W T55R Y119S G174L",4
"lib2","SARS-CoV-2","CTGGAAACTCATCTAC",14,121.8,9.34,-1.5,0.06,2.01,1.05,0,">1 nonsynonymous","N107A N120L E141T",3
"lib2","SARS-CoV-2","CTGGAAAGAATCAGTG",4,36.36,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N4Y W23L L60P G117P Y123D",5
"lib2","SARS-CoV-2","CTGGAAAGCATGAACC",5,42.42,10.7,-0.13,0.05,2.94,1.05,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","CTGGAAAGGAACTAAT",2,16.21,10.82,-0.01,0.08,2.79,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGAAATAAACATTA",7,26.58,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V37F T55V Q84R K87T Q168H R179D T201M",7
"lib2","SARS-CoV-2","CTGGAAATATGTATGC",9,47.31,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12K G117A F126K",3
"lib2","SARS-CoV-2","CTGGAAATGTAGTCCT",2,9,10.39,-0.45,0.11,2.87,1.15,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","CTGGAAATTTAAACAG",6,73.23,9.66,-1.18,0.03,2.96,1.06,0,">1 nonsynonymous","P54W Y119S",2
"lib2","SARS-CoV-2","CTGGAACAACCGATAA",3,23.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61M V77N T100W Y119L",4
"lib2","SARS-CoV-2","CTGGAACAATAATGTG",7,46.92,7.95,-2.89,0.29,1.5,1.07,0.02,">1 nonsynonymous","I80M G174V",2
"lib2","SARS-CoV-2","CTGGAACAGATTAGCT",2,30.56,6,-4.84,1.03,3,1.36,0.01,">1 nonsynonymous","Y35C S45H F62C I88Q E141N",5
"lib2","SARS-CoV-2","CTGGAACATCACGAAT",3,40.35,9.68,-1.16,0.08,2.36,1.06,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","CTGGAACCATGACACG",8,59.84,8.1,-2.74,0.26,1.59,1.23,0.02,">1 nonsynonymous","F62D V77M T170E",3
"lib2","SARS-CoV-2","CTGGAACCTACAAACG",10,88.65,10.85,0.02,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGAACGAAATCGCA",5,37.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T46I R136F Y159T T170V Q176V",5
"lib2","SARS-CoV-2","CTGGAACGTAGGGAAT",5,24.59,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","V77S I104Q",2
"lib2","SARS-CoV-2","CTGGAACGTTCAGCGT",3,27.28,7.81,-3.02,0.3,1.5,1.07,0.06,">1 nonsynonymous","E141V V181N",2
"lib2","SARS-CoV-2","CTGGAACTATTATCCA",9,157.41,9.27,-1.57,0.06,2.82,1.1,0,"1 nonsynonymous","Q168C",1
"lib2","SARS-CoV-2","CTGGAACTGATGCCAT",1,18.96,10.91,0.07,0.11,2.94,1.08,0,"1 nonsynonymous","T3P",1
"lib2","SARS-CoV-2","CTGGAACTTTGTCAAA",5,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K S43I C49E S113V Y119S",5
"lib2","SARS-CoV-2","CTGGAAGAAACACAAA",3,52.47,10.74,-0.1,0.04,3,1.01,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","CTGGAAGACAATTCTC",1,43.6,10.32,-0.51,0.09,2.59,1,0,">1 nonsynonymous","A42L V180T L188H",3
"lib2","SARS-CoV-2","CTGGAAGACACTAACA",13,96.64,10.42,-0.41,0.05,2.92,1.07,0,">1 nonsynonymous","S53M L60I D97S",3
"lib2","SARS-CoV-2","CTGGAAGTCTTTGGAA",12,148.64,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R124L I142L",2
"lib2","SARS-CoV-2","CTGGAAGTTGAAAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50I W106R N130F",3
"lib2","SARS-CoV-2","CTGGAATAAATGTTGA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30E C49S L183F",3
"lib2","SARS-CoV-2","CTGGAATGAGACTACA",4,30.54,9.06,-1.78,0.08,2.89,1.02,0,">1 nonsynonymous","N40H P54R C61H G116Q G117S",5
"lib2","SARS-CoV-2","CTGGAATTAGACAATA",7,0.87,NA,NA,NA,NA,NA,NA,"stop","L111*",1
"lib2","SARS-CoV-2","CTGGAATTTCACTGCT",1,6.03,8.84,-2,0.45,1.73,1.06,0.05,">1 nonsynonymous","K56S D137Y",2
"lib2","SARS-CoV-2","CTGGAATTTTCCCACA",4,70.95,10.63,-0.21,0.05,2.95,1.05,0,"1 nonsynonymous","N120W",1
"lib2","SARS-CoV-2","CTGGACAAATTGATAT",5,28.02,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S53L L95E Y175R",3
"lib2","SARS-CoV-2","CTGGACAATTTCTTGT",17,253.06,10.21,-0.63,0.03,2.96,1.02,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","CTGGACAGAAACTGAC",6,58.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N N157G",2
"lib2","SARS-CoV-2","CTGGACATAATTACCG",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F160N T201C",2
"lib2","SARS-CoV-2","CTGGACATTTGAATCG",2,9.68,10.97,0.14,0.12,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGACCCAGCGTAGT",1,16.67,9.13,-1.7,0.09,2.66,1.05,0,">1 nonsynonymous","N120I G155L",2
"lib2","SARS-CoV-2","CTGGACCCAGTTAGTG",3,13.79,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F70C Q84L I88W G146H",4
"lib2","SARS-CoV-2","CTGGACCCCCACAAGC",4,34.32,6,-4.84,1.06,1.5,1.14,0,">1 nonsynonymous","G86D C102V Y123F Y159N",4
"lib2","SARS-CoV-2","CTGGACCCGAATCAAT",5,45.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L G86T",2
"lib2","SARS-CoV-2","CTGGACCTCAGTAGAT",4,33.18,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A18I Y123P",2
"lib2","SARS-CoV-2","CTGGACCTCCACCTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S G101C P133L F160S",4
"lib2","SARS-CoV-2","CTGGACGACACCCAGT",2,40.93,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","W23K A105S I142D",3
"lib2","SARS-CoV-2","CTGGACGAGGAACACT",4,14.93,7.07,-3.77,0.73,1.5,1.13,0.01,">1 nonsynonymous","P7L T85Q T100I K128A P161C",5
"lib2","SARS-CoV-2","CTGGACGTTTGTTCTC",1,10.61,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","A14M L95H G101Q T148V",4
"lib2","SARS-CoV-2","CTGGACTAAAACGTCA",3,58.29,9.39,-1.44,0.06,2.77,1.05,0,">1 nonsynonymous","G9T G146Y",2
"lib2","SARS-CoV-2","CTGGACTACCATCCTA",11,72.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A89E G117L E141V L162A",4
"lib2","SARS-CoV-2","CTGGACTACTATTCCG",1,10.82,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","C49P A81L K114S",3
"lib2","SARS-CoV-2","CTGGACTCCTAGTGTG",4,35.66,10.79,-0.04,0.07,2.95,1.05,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","CTGGAGAAGGTGATTT",2,26.71,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","N1R L38R G86S G155Y",4
"lib2","SARS-CoV-2","CTGGAGACATAGGAGA",4,80.89,10.88,0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGAGAGTTTTTTAA",3,9.51,NA,NA,NA,NA,NA,NA,"stop","S29* S129I K198R",3
"lib2","SARS-CoV-2","CTGGAGCACCAAGTAT",6,127.84,8.31,-2.52,0.09,2.21,1.1,0,">1 nonsynonymous","D112L G166K",2
"lib2","SARS-CoV-2","CTGGAGCAGCTAACAG",3,23.71,10.67,-0.17,0.06,2.96,1.05,0,"1 nonsynonymous","N64K",1
"lib2","SARS-CoV-2","CTGGAGGAATCCCTGA",2,24.94,10.88,0.05,0.06,2.93,1.06,0,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","CTGGAGGAGAAGTCAC",7,116.75,6.16,-4.67,0.8,1.5,1.23,0.02,">1 nonsynonymous","F44I T63L Q176R",3
"lib2","SARS-CoV-2","CTGGAGGCTAACAGGA",6,23,8.06,-2.77,0.37,1.5,1,0.04,">1 nonsynonymous","D97S S164L V182D S200I",4
"lib2","SARS-CoV-2","CTGGAGGGCAGTAAGA",3,158.82,9.77,-1.07,0.05,1.96,1.04,0,">1 nonsynonymous","R27L S36R P96K",3
"lib2","SARS-CoV-2","CTGGAGGTAAATTAAT",2,86.45,9.59,-1.24,0.04,2.92,1.07,0,">1 nonsynonymous","L5Q Y119N",2
"lib2","SARS-CoV-2","CTGGAGGTATATTCTC",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K S53L D112R K132V V194I",5
"lib2","SARS-CoV-2","CTGGAGTTAGAACTCG",7,31.11,6,-4.84,0.94,1.5,1.15,0.01,">1 nonsynonymous","Y66L P82N",2
"lib2","SARS-CoV-2","CTGGAGTTCTCGATGG",5,28.61,6.9,-3.93,0.32,1.5,1.06,0.03,">1 nonsynonymous","K94M R136L P149S",3
"lib2","SARS-CoV-2","CTGGATAACAAAACAA",3,33.43,6,-4.84,1.07,1.5,1.17,0.01,">1 nonsynonymous","L5E T85V D98F Y178R",4
"lib2","SARS-CoV-2","CTGGATAACCGTCCCC",7,60.57,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5M S53Y D59L R127L S200T",5
"lib2","SARS-CoV-2","CTGGATAAGGTACGAT",8,28.61,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F70S L95N G117F F160H",4
"lib2","SARS-CoV-2","CTGGATACTACTTGCA",1,15.7,9.79,-1.04,0.09,2.86,1.01,0,">1 nonsynonymous","R16G Y35F N40P D59G I104L N120S",6
"lib2","SARS-CoV-2","CTGGATACTCACTCCT",3,95.54,9.79,-1.04,0.07,2.28,1.04,0,">1 nonsynonymous","D97V N107S S147L S200Q",4
"lib2","SARS-CoV-2","CTGGATAGGAATGATG",5,46.51,10.19,-0.65,0.06,2.83,1.03,0,">1 nonsynonymous","S43G S129W P149T Q163R",4
"lib2","SARS-CoV-2","CTGGATATGGATTAAT",4,21.97,10.76,-0.08,0.08,2.92,1.08,0,">1 nonsynonymous","N130V N151L",2
"lib2","SARS-CoV-2","CTGGATATGTAACGTA",4,61.24,9.6,-1.24,0.12,2.31,1.06,0.01,">1 nonsynonymous","E10M N107C",2
"lib2","SARS-CoV-2","CTGGATATTCCGGTGC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C61* I80H V103S",3
"lib2","SARS-CoV-2","CTGGATCATCTCAAGT",7,92.53,8.92,-1.91,0.09,1.9,1.1,0,">1 nonsynonymous","N107K P149W",2
"lib2","SARS-CoV-2","CTGGATCCCTCCCTCA",9,106.97,10.82,-0.02,0.06,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGGATGATGTACCTA",3,82.29,8.46,-2.38,0.11,2.68,1.07,0.01,"1 nonsynonymous","R73D",1
"lib2","SARS-CoV-2","CTGGATGCTGATCAAC",1,18.63,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D90S I142S F167R",3
"lib2","SARS-CoV-2","CTGGATTAAATTTGCG",2,61.21,6.02,-4.81,0.85,1.5,1.12,0.01,">1 nonsynonymous","Y121V Q176R",2
"lib2","SARS-CoV-2","CTGGCAAAATACACAT",1,12.79,10.71,-0.12,0.12,2.91,1.14,0.01,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","CTGGCAAACGAAATAG",7,5.91,NA,NA,NA,NA,NA,NA,"stop","S19L Y66* A81N L131R",4
"lib2","SARS-CoV-2","CTGGCAAATACTAGTG",16,123.2,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R27E C49M F167R S200W",4
"lib2","SARS-CoV-2","CTGGCAAATCATCACT",8,54.68,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C49Y Y121I T148F C158L",4
"lib2","SARS-CoV-2","CTGGCAATGCATAAGG",21,45.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N P96M N107W N157S",4
"lib2","SARS-CoV-2","CTGGCAATTATTGGAC",2,70.36,9.65,-1.19,0.13,1.92,1.06,0.01,"1 nonsynonymous","D137N",1
"lib2","SARS-CoV-2","CTGGCACAACCACATT",8,104.63,10.85,0.02,0.05,2.88,1.13,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","CTGGCACCCTAGAGCA",5,110.14,10.25,-0.58,0.02,2.79,1.01,0,"1 nonsynonymous","K94Q",1
"lib2","SARS-CoV-2","CTGGCACCGTGTGCCA",14,122.94,10.59,-0.25,0.04,2.89,1.08,0,">1 nonsynonymous","N120A E141Y",2
"lib2","SARS-CoV-2","CTGGCACGGACACCGT",1,14.06,10.48,-0.36,0.15,2.71,1.31,0.01,">1 nonsynonymous","I28F P82V",2
"lib2","SARS-CoV-2","CTGGCACTAATGAAAG",1,26.32,10.67,-0.16,0.09,2.96,1.05,0,"1 nonsynonymous","C61I",1
"lib2","SARS-CoV-2","CTGGCAGATAGATATT",5,16.2,7.41,-3.42,0.39,1.5,1.22,0.05,">1 nonsynonymous","I2R Y35R P54Q F99V N109I E141L",6
"lib2","SARS-CoV-2","CTGGCATACTACTACC",2,18,9.12,-1.72,0.2,1.5,1.02,0.02,">1 nonsynonymous","G9K D34I L38R V173H",4
"lib2","SARS-CoV-2","CTGGCATATTAAAATT",19,335.12,10.17,-0.67,0.04,2.82,1.01,0,">1 nonsynonymous","V11T V37Y",2
"lib2","SARS-CoV-2","CTGGCATCCTAGAAAG",10,44.26,6,-4.84,2,1.5,1.26,0.06,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","CTGGCCAACGGTCCAA",1,1.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140F",1
"lib2","SARS-CoV-2","CTGGCCAAGAAGGTCT",5,71.62,10.77,-0.07,0.05,2.97,1.05,0,"1 nonsynonymous","S29Y",1
"lib2","SARS-CoV-2","CTGGCCACAACCATGA",1,283.67,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","W23N Y35R E76K N120I",4
"lib2","SARS-CoV-2","CTGGCCCAAGCAAAGA",1,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V F99S G166F",3
"lib2","SARS-CoV-2","CTGGCCCACCAAATCT",11,81.45,9.15,-1.69,0.17,1.5,1.02,0.01,">1 nonsynonymous","K128S F185D S200P",3
"lib2","SARS-CoV-2","CTGGCCCATTACAGCG",11,36.76,6.71,-4.13,0.36,1.5,1.19,0.02,">1 nonsynonymous","T15A Y91E",2
"lib2","SARS-CoV-2","CTGGCCCCAATCGAAA",3,41.71,10.22,-0.61,0.08,2.76,1.1,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","CTGGCGAACTCGATCT",4,6.49,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","CTGGCGATTTCCTCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L R78S L95C G116Y E154Y",5
"lib2","SARS-CoV-2","CTGGCGTACATGAGAA",13,54.58,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","I2K Y50D V180R",3
"lib2","SARS-CoV-2","CTGGCTCGACACCAGC",11,57.24,6,-4.84,1.68,1.5,1.17,0.01,">1 nonsynonymous","I2N Q84M D90Y C150M",4
"lib2","SARS-CoV-2","CTGGCTGGAATTAAAA",3,19.51,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4L Y93I L162G",3
"lib2","SARS-CoV-2","CTGGCTGGATTAGACA",2,19.02,8,-2.83,0.13,1.64,1.09,0,">1 nonsynonymous","S19F R78H",2
"lib2","SARS-CoV-2","CTGGCTTAAATTAGAT",1,5.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","CTGGCTTAGATATAGG",3,88.89,10.87,0.03,0.06,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGGCTTATGTGTGCG",1,2.46,NA,NA,NA,NA,NA,NA,"stop","Q84* T201M",2
"lib2","SARS-CoV-2","CTGGGAACATTAACTA",13,131.21,10.84,0,0.04,2.95,1.07,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","CTGGGAACTAAATGTA",13,187.44,10.71,-0.13,0.01,2.95,1.04,0,">1 nonsynonymous","N24T S41F E141Q",3
"lib2","SARS-CoV-2","CTGGGAACTGGTCTAA",3,54.45,10.88,0.04,0.05,2.96,1.04,0,">1 nonsynonymous","H189Q T201F",2
"lib2","SARS-CoV-2","CTGGGAAGTGGACTCT",11,1.22,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","CTGGGAATATACCGAA",7,94.01,10.64,-0.19,0.07,2.83,1.06,0,"1 nonsynonymous","S53Y",1
"lib2","SARS-CoV-2","CTGGGACATTTAATAC",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V G86T T100G C158P",4
"lib2","SARS-CoV-2","CTGGGACCCAAGCTCA",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N D137A A190V",3
"lib2","SARS-CoV-2","CTGGGAGATAGAGAAC",7,27.34,6,-4.84,2,3,1.11,0.01,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","CTGGGATACGTGGGAC",19,6.19,NA,NA,NA,NA,NA,NA,"stop","D59M S69G N107* R127E",4
"lib2","SARS-CoV-2","CTGGGATAGTAGCTAA",1,24.89,10.78,-0.06,0.08,2.86,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGGATCGACACGTG",5,4.67,NA,NA,NA,NA,NA,NA,"stop","R136*",1
"lib2","SARS-CoV-2","CTGGGATGAAGAAGTC",9,147.04,10.91,0.07,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGGCAGACCACGCG",8,56.26,10.79,-0.04,0.08,2.89,1.15,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","CTGGGCATAACTATTA",9,92.4,10.8,-0.04,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGGCATTAGTACTA",2,22.57,10.41,-0.43,0.07,2.82,1.2,0,">1 nonsynonymous","L5Q E154P",2
"lib2","SARS-CoV-2","CTGGGCCCGATTCGTA",9,64.91,6.9,-3.94,0.39,1.5,1.27,0.02,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","CTGGGCCTATCACATC",3,33.18,10.41,-0.42,0.05,2.87,1.02,0,">1 nonsynonymous","F44K T63Q",2
"lib2","SARS-CoV-2","CTGGGCGGTTCTAATG",3,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P Y39R Q144S F160V Q168S",5
"lib2","SARS-CoV-2","CTGGGCTAAATAAAGT",6,28.28,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","C61E K87A L95E V103L P133F V153G",6
"lib2","SARS-CoV-2","CTGGGGAACTTTGATT",2,53.34,10.96,0.12,0.07,2.97,1.04,0,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","CTGGGGACGTATTACC",2,57.87,10.81,-0.03,0.05,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGGGAGCCTATAAA",3,3.51,NA,NA,NA,NA,NA,NA,"stop","T46* D90N P96S",3
"lib2","SARS-CoV-2","CTGGGGAGCGGCTCAT",1,80.25,10.89,0.05,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGGGCACTTGCATG",6,29.49,10.76,-0.08,0.06,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGGGGCCAGCTTGGG",4,68.83,8.29,-2.54,0.08,2.57,1.11,0,">1 nonsynonymous","R16S A42W P54K D98G N157H",5
"lib2","SARS-CoV-2","CTGGGGCGGTACGCAG",12,0.15,NA,NA,NA,NA,NA,NA,"stop","N4* G9F E76G L95M Y121W P149N G174M",7
"lib2","SARS-CoV-2","CTGGGGTGCTATGCCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","CTGGGTCCTTACGCAT",2,0.53,NA,NA,NA,NA,NA,NA,"stop","F12N W106S K132*",3
"lib2","SARS-CoV-2","CTGGGTTAGATGAGCA",4,59.61,9.86,-0.98,0.07,2.52,1.02,0,">1 nonsynonymous","S139F N171Q",2
"lib2","SARS-CoV-2","CTGGGTTTGAAATCCC",1,36.55,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","Y119Q R179D",2
"lib2","SARS-CoV-2","CTGGTAAATAACGACA",8,0.45,NA,NA,NA,NA,NA,NA,"stop","T3C S69R Y178*",3
"lib2","SARS-CoV-2","CTGGTAAATATAACCT",2,24.57,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","P82I S113M",2
"lib2","SARS-CoV-2","CTGGTAAATGGATATA",11,169,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A22P S41N C61A Y175Q",4
"lib2","SARS-CoV-2","CTGGTAACTTTATATC",6,32.73,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6R V77E D112Q S129Q",4
"lib2","SARS-CoV-2","CTGGTAAGATGTACGA",4,119.2,10.7,-0.14,0.05,2.94,1.06,0,">1 nonsynonymous","L5G V37R",2
"lib2","SARS-CoV-2","CTGGTAAGTAGCAAAT",2,7.43,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C102K E141H",2
"lib2","SARS-CoV-2","CTGGTAATAAACCGTG",2,46.79,10.22,-0.61,0.06,2.89,1,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","CTGGTAATAGTAGACC",21,340.16,10.88,0.04,0.05,2.93,1.08,0,">1 nonsynonymous","G9E V32R",2
"lib2","SARS-CoV-2","CTGGTACAAAATCCAC",8,13.95,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","N64I V103E Y143V V153R",4
"lib2","SARS-CoV-2","CTGGTACAAAGTAATA",16,0.38,NA,NA,NA,NA,NA,NA,"stop","E10I T85I T100V T201*",4
"lib2","SARS-CoV-2","CTGGTACAATGAAAAT",4,82.97,10.59,-0.25,0.08,2.86,1.13,0,">1 nonsynonymous","K56Y L111E",2
"lib2","SARS-CoV-2","CTGGTACACAAGTAGC",8,96.26,9.38,-1.45,0.05,2.91,1.05,0,"1 nonsynonymous","A145F",1
"lib2","SARS-CoV-2","CTGGTACATAAGCAAA",2,16.25,6.03,-4.8,2,1.5,1.19,0.03,">1 nonsynonymous","D34E Y91L P96Y Y121L E141I",5
"lib2","SARS-CoV-2","CTGGTACCTTACCCAA",13,144.79,10.62,-0.21,0.02,2.94,1.05,0,"1 nonsynonymous","E10M",1
"lib2","SARS-CoV-2","CTGGTACTAACATTAC",15,186.72,9.77,-1.07,0.03,2.89,1.08,0,">1 nonsynonymous","A42V N109H",2
"lib2","SARS-CoV-2","CTGGTACTAGACTACT",2,16.15,10.46,-0.38,0.06,2.9,1.07,0,">1 nonsynonymous","E141R A190I",2
"lib2","SARS-CoV-2","CTGGTAGCACCTAGTA",1,25.18,10.48,-0.35,0.07,2.97,1,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","CTGGTATAAATCGAGG",1,40.18,8.35,-2.49,0.13,2.81,1.1,0.01,">1 nonsynonymous","Q176E L188Y",2
"lib2","SARS-CoV-2","CTGGTATTAACGACCG",1,23.56,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","L5P S29I G116P L131R P161R G174L",6
"lib2","SARS-CoV-2","CTGGTCAACTATATTT",4,96.15,10.92,0.08,0.06,2.94,1.07,0,"1 nonsynonymous","S43T",1
"lib2","SARS-CoV-2","CTGGTCACGATTGCCG",18,160.2,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A42W D59E P96S W106S Q176E",5
"lib2","SARS-CoV-2","CTGGTCAGAAAATTAA",4,76.13,10.8,-0.04,0.05,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGTCATAATGGCTG",3,25.07,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","P7V N30I S113V Y165S",4
"lib2","SARS-CoV-2","CTGGTCATGAAGAGTT",3,73.23,9.56,-1.28,0.05,2.91,1.06,0,">1 nonsynonymous","L125T V180I",2
"lib2","SARS-CoV-2","CTGGTCCACCAAACAG",2,5.53,6.06,-4.77,1.17,3,1,0,">1 nonsynonymous","K26M C49I I88N G101S E135P",5
"lib2","SARS-CoV-2","CTGGTCCCAGTTGTAT",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T N130Q E135L Y178I",4
"lib2","SARS-CoV-2","CTGGTCGAAAACATTA",8,135.23,10.84,0,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGGTCGGGTCCCTTA",7,37.44,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","Y123I T140N P161V",3
"lib2","SARS-CoV-2","CTGGTCTATAACGGAG",4,16.95,6.98,-3.86,0.41,1.5,1.11,0.03,"1 nonsynonymous","R179S",1
"lib2","SARS-CoV-2","CTGGTGATAAATAACG",13,187.31,6.99,-3.84,0.07,2.01,1.08,0,">1 nonsynonymous","R136I G172S",2
"lib2","SARS-CoV-2","CTGGTGATACGTGAGT",7,127.29,10.21,-0.63,0.07,2.34,1.01,0,">1 nonsynonymous","S43V E76C T201I",3
"lib2","SARS-CoV-2","CTGGTGCCGTATAGCT",23,832.27,10.81,-0.03,0.04,2.92,1.1,0,"1 nonsynonymous","T201E",1
"lib2","SARS-CoV-2","CTGGTGTTGGTGACTC",4,2.27,NA,NA,NA,NA,NA,NA,"stop","Y35L I88* P96* Y121* F134H G152*",6
"lib2","SARS-CoV-2","CTGGTTAAAAGACTAT",1,3.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84H",1
"lib2","SARS-CoV-2","CTGGTTAACTGTACCT",10,5.21,NA,NA,NA,NA,NA,NA,"stop","A14S C61*",2
"lib2","SARS-CoV-2","CTGGTTAGTAAATATA",10,170.97,10.18,-0.66,0.03,2.73,1.07,0,">1 nonsynonymous","R16Y F99Y",2
"lib2","SARS-CoV-2","CTGGTTCTTCTAAGTA",7,65.73,9.34,-1.5,0.06,2.06,1.04,0,">1 nonsynonymous","V37I S69L G83N",3
"lib2","SARS-CoV-2","CTGGTTCTTGATAATC",8,183.39,10.48,-0.35,0.05,2.91,1.04,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","CTGGTTGAGCGTTGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","A42* V52P G86S N107V",4
"lib2","SARS-CoV-2","CTGGTTGCATATCAAA",5,94.56,9.45,-1.38,0.09,2.61,1.08,0,">1 nonsynonymous","D97S G146Y",2
"lib2","SARS-CoV-2","CTGGTTGCATTCGCTA",2,41.79,8.03,-2.8,0.15,1.88,1.05,0.01,">1 nonsynonymous","N30E T46L A81G Q168L",4
"lib2","SARS-CoV-2","CTGTAAAACCTCACAG",1,19.59,10.89,0.05,0.08,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTAAACAATGCAAT",7,66.69,10.37,-0.47,0.06,2.92,1.1,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","CTGTAAAGTATCCACG",3,7.08,10.93,0.1,0.24,2.71,1.05,0.01,">1 nonsynonymous","I72Y T85V T100Y I104M E186I",5
"lib2","SARS-CoV-2","CTGTAAATACACGACG",3,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S D34H C61I K128S T201P",5
"lib2","SARS-CoV-2","CTGTAAATCTACGTAT",6,72.51,10.08,-0.76,0.09,2.4,1.04,0,">1 nonsynonymous","D90G S147Y T201P",3
"lib2","SARS-CoV-2","CTGTAAATGAGAACTT",3,29.88,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25S C49K Q84L Q144T S184C",5
"lib2","SARS-CoV-2","CTGTAAATGGCTCTAA",6,26.81,7.03,-3.81,0.3,1.5,1.1,0.03,">1 nonsynonymous","N64L N130L E135G I142N C195D",5
"lib2","SARS-CoV-2","CTGTAAATTACTAGTC",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K A89K K132I",3
"lib2","SARS-CoV-2","CTGTAAATTCATAAGG",2,48.7,10.89,0.05,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTAACAATGCCGGC",11,90.42,10.54,-0.3,0.05,2.8,1.04,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","CTGTAACACAAATTAA",3,13.96,9.47,-1.37,0.24,1.84,1.13,0.05,">1 nonsynonymous","L5S V11G",2
"lib2","SARS-CoV-2","CTGTAACAGAAGAGTA",6,36.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50A Y165P",2
"lib2","SARS-CoV-2","CTGTAACAGACTATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P169M R179S",2
"lib2","SARS-CoV-2","CTGTAACCAATATGGG",14,255.33,8.48,-2.35,0.06,2.66,1.08,0,">1 nonsynonymous","E141V P149D G155T G166T V173K",5
"lib2","SARS-CoV-2","CTGTAACCACTCACTA",1,65.02,10.39,-0.45,0.05,2.87,1.08,0,">1 nonsynonymous","A42R L57S",2
"lib2","SARS-CoV-2","CTGTAACCTCACAGTT",8,192.53,8.09,-2.75,0.13,1.98,1.09,0.01,">1 nonsynonymous","T63F Q84L G166T",3
"lib2","SARS-CoV-2","CTGTAACTATCTCACA",14,153.81,10.15,-0.69,0.06,2.82,1.01,0,"1 nonsynonymous","Q79K",1
"lib2","SARS-CoV-2","CTGTAACTCACAGCGC",1,23.7,8.82,-2.02,0.14,2.77,1.03,0.01,">1 nonsynonymous","A42V Y119S R136L",3
"lib2","SARS-CoV-2","CTGTAACTGCATAAAG",28,3.31,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","CTGTAACTTTCCGCGA",1,12.44,9.29,-1.54,0.12,2.29,1,0.01,">1 nonsynonymous","T3V I88L Y121L Q168A P197S",5
"lib2","SARS-CoV-2","CTGTAAGAAACCCATT",13,23.68,7.37,-3.47,0.46,1.5,1.08,0.07,">1 nonsynonymous","N13R Q84D",2
"lib2","SARS-CoV-2","CTGTAAGGATACAGGG",4,0.1,NA,NA,NA,NA,NA,NA,"stop","R27* C49T",2
"lib2","SARS-CoV-2","CTGTAAGGCCGAATAG",7,136.11,10.14,-0.7,0.07,2.6,1.04,0,">1 nonsynonymous","N58V Y66S",2
"lib2","SARS-CoV-2","CTGTAAGGCGCCCTAG",2,59.55,10.87,0.04,0.04,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGTAAGGTATGAGTA",1,32.24,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2Y I88Y",2
"lib2","SARS-CoV-2","CTGTAAGTTTAAACTC",1,12.7,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","Y21D",1
"lib2","SARS-CoV-2","CTGTAATAAAAGGCAA",5,30.29,8.17,-2.67,0.12,2.03,1.11,0.01,">1 nonsynonymous","Y39P Q144M G155F",3
"lib2","SARS-CoV-2","CTGTAATAATACACAT",5,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57F D90I D97C N107V N120V S129V",6
"lib2","SARS-CoV-2","CTGTAATATCTCGCGA",7,30.8,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A42R D90V R179F",3
"lib2","SARS-CoV-2","CTGTAATCCAGATTCG",2,23.93,7.27,-3.56,0.45,1.5,1.22,0.05,">1 nonsynonymous","N30Y V37D K48A P54G L60T",5
"lib2","SARS-CoV-2","CTGTAATCTATGATCC",4,76.21,10.73,-0.11,0.03,2.94,1.06,0,"1 nonsynonymous","K56V",1
"lib2","SARS-CoV-2","CTGTAATGCTAAATGG",16,52.68,9.79,-1.05,0.11,2.14,1.04,0,">1 nonsynonymous","N4R T63S A81F",3
"lib2","SARS-CoV-2","CTGTAATTAATAGGAA",9,51.63,6,-4.84,1.9,1.5,1.15,0.01,">1 nonsynonymous","D90G D98W R179K S200K",4
"lib2","SARS-CoV-2","CTGTAATTGGCGCAAA",3,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I V115L E141Q",3
"lib2","SARS-CoV-2","CTGTAATTTTAAAAGA",13,90.7,10.01,-0.83,0.07,2.23,1.02,0,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","CTGTACAAGATATACG",8,149.37,10.85,0.02,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTACACGGCCTAGC",1,51.3,10.5,-0.34,0.39,1.5,1,0.07,">1 nonsynonymous","T100P N107T S129G",3
"lib2","SARS-CoV-2","CTGTACACTTAGAGAA",6,112.47,7.95,-2.88,0.14,1.51,1.11,0.01,">1 nonsynonymous","N64S Y143S T170W",3
"lib2","SARS-CoV-2","CTGTACAGGGTTCGCA",11,235.59,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K114A L122T F167R",3
"lib2","SARS-CoV-2","CTGTACATATTCCCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D98* V115S P197S",3
"lib2","SARS-CoV-2","CTGTACCATATCAAAA",6,17.81,7.66,-3.18,0.42,1.5,1.21,0.07,">1 nonsynonymous","S19V L95V",2
"lib2","SARS-CoV-2","CTGTACCCGACAATAA",2,53.33,9.85,-0.98,0.1,2.25,1.03,0,">1 nonsynonymous","G9T A105I",2
"lib2","SARS-CoV-2","CTGTACCGACAACATC",9,180.73,9.97,-0.87,0.04,2.95,1.05,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","CTGTACCTGATGGTCG",6,170.36,10.83,0,0.06,2.98,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGTACGCACAAAGAT",1,6.69,6,-4.84,2,3,1.2,0.04,">1 nonsynonymous","V103Y K132T L162Q",3
"lib2","SARS-CoV-2","CTGTACGCCACTCCTT",2,22.22,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","W23S L60P",2
"lib2","SARS-CoV-2","CTGTACGCCTCACAGA",2,21.48,10.86,0.02,0.11,2.77,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTACTATAGATTTC",4,7.95,6,-4.84,2,3,1.09,0.05,">1 nonsynonymous","I2L F12S W106M V180P",4
"lib2","SARS-CoV-2","CTGTACTCCATTATGA",6,2.18,NA,NA,NA,NA,NA,NA,"stop","D75* N92M N118R",3
"lib2","SARS-CoV-2","CTGTACTGAAGGCTGG",3,54.12,10.86,0.02,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTACTTCGGGCTGG",1,15.6,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P54S T85N Y91P V103L L162R",5
"lib2","SARS-CoV-2","CTGTACTTCTATAAAA",2,36.56,9.1,-1.73,0.21,1.78,1.05,0.02,">1 nonsynonymous","T55L P96I K199T",3
"lib2","SARS-CoV-2","CTGTAGAATAGTCCTA",1,6.15,9.08,-1.76,0.35,1.7,1.19,0.02,">1 nonsynonymous","A14Y K128L",2
"lib2","SARS-CoV-2","CTGTAGCCACATTAGC",1,13.45,9.1,-1.73,0.19,1.7,1.26,0.01,">1 nonsynonymous","K48H A81L",2
"lib2","SARS-CoV-2","CTGTAGCCACCTCTAG",1,7.38,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","D97N D112Q",2
"lib2","SARS-CoV-2","CTGTAGGCAACCTACA",6,28.77,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V11T T63L V103D G146L",4
"lib2","SARS-CoV-2","CTGTAGGGACGCGCCG",4,10.76,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N1W A14M Y50R E154K",4
"lib2","SARS-CoV-2","CTGTAGTATGAAATGC",2,47.65,9.03,-1.8,0.12,2.4,1.07,0.01,">1 nonsynonymous","A14G V115I Y175H V181I",4
"lib2","SARS-CoV-2","CTGTAGTGAGAAAGGT",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S T55I G146H Q163N",4
"lib2","SARS-CoV-2","CTGTAGTTAGAGTCCA",1,13.71,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A22V I28V T85L W106C N157S",5
"lib2","SARS-CoV-2","CTGTATAACATCAATT",4,164.96,10.5,-0.34,0.03,2.96,1.02,0,"1 nonsynonymous","Y178T",1
"lib2","SARS-CoV-2","CTGTATACGAATTATA",4,80.32,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6N Y21R A67S",3
"lib2","SARS-CoV-2","CTGTATAGTAAATTCT",3,73.93,8.29,-2.55,0.13,2.79,1.05,0.01,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","CTGTATATAGCCTACA",6,77.45,9.89,-0.94,0.1,2.38,1,0.01,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","CTGTATCACAAAGATA",4,2.39,NA,NA,NA,NA,NA,NA,"stop","V20A C61* L95R G155L",4
"lib2","SARS-CoV-2","CTGTATCACGTAAACA",4,77.49,6,-4.84,1.86,1.5,1.11,0.01,">1 nonsynonymous","N118W Y143N",2
"lib2","SARS-CoV-2","CTGTATCATAAATGCA",3,115.75,10.06,-0.77,0.06,2.89,1.08,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","CTGTATCATACGCCTC",11,87.12,9.17,-1.67,0.07,1.94,1.05,0,">1 nonsynonymous","N1L K56S D90M S139N E154L",5
"lib2","SARS-CoV-2","CTGTATCCTACTTCTT",3,53.65,10.52,-0.32,0.09,2.88,1.06,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","CTGTATCTCAAATCAC",4,57.39,10.8,-0.03,0.06,2.98,1.01,0,">1 nonsynonymous","D90Q E141T",2
"lib2","SARS-CoV-2","CTGTATGAATAACGAA",2,11.76,10.74,-0.1,0.09,2.81,1.22,0,"1 nonsynonymous","P54Q",1
"lib2","SARS-CoV-2","CTGTATGAGGAAAGGT",1,50.52,10.9,0.06,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTATGCGCATCGCA",7,33.31,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N13L A18G W23G G155A L162W",5
"lib2","SARS-CoV-2","CTGTATGGACTCATAT",10,126.49,10.59,-0.25,0.03,2.94,1.07,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","CTGTATGGAGGTTCTG",5,157.63,10.81,-0.02,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTATGTAAGGCCCA",6,55.61,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","I2A L95G T100S",3
"lib2","SARS-CoV-2","CTGTATTACATAGGCG",2,7.5,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F12M C49A Y93V S184L",4
"lib2","SARS-CoV-2","CTGTATTAGGACAAAA",6,30.34,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E141C V182W",2
"lib2","SARS-CoV-2","CTGTATTATCTGAATG",4,5.97,6,-4.84,2,3,1.03,0,">1 nonsynonymous","C6V Y50L Y91C L125Y K132L G146V",6
"lib2","SARS-CoV-2","CTGTATTCCATATAAA",9,20.8,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N58R A105L R179W",3
"lib2","SARS-CoV-2","CTGTATTCGACCCTAT",11,184.51,10.82,-0.01,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTATTCGAGACTTA",3,77.21,9.29,-1.54,0.08,1.84,1.07,0,">1 nonsynonymous","A33E Y35K A42E",3
"lib2","SARS-CoV-2","CTGTATTCTAAAAGTA",2,28.58,9.56,-1.28,0.15,2.38,1.06,0.01,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","CTGTATTGTGATAGTC",1,96.51,8.37,-2.46,0.11,2.6,1.08,0,"1 nonsynonymous","Q176G",1
"lib2","SARS-CoV-2","CTGTATTTGTCAATAA",2,52.34,7.56,-3.28,0.28,1.52,1.11,0.02,">1 nonsynonymous","D112N K114Q",2
"lib2","SARS-CoV-2","CTGTCAAAGAGTCACG",1,18.6,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F12P W106R",2
"lib2","SARS-CoV-2","CTGTCAAATAACTAAA",3,30.28,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","G9S N58S A81K L95Y P149K G155A",6
"lib2","SARS-CoV-2","CTGTCAACTATAGTCA",1,6.59,10.48,-0.36,0.18,2.9,1.09,0.01,">1 nonsynonymous","N4D A33G V115F",3
"lib2","SARS-CoV-2","CTGTCAAGAAAATTCA",4,89.22,9.96,-0.87,0.08,2.58,1.07,0,">1 nonsynonymous","A33R D97Q",2
"lib2","SARS-CoV-2","CTGTCAAGATAACAAA",1,5.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13L D98T P161C",3
"lib2","SARS-CoV-2","CTGTCAAGTGCATGAA",9,87.59,9.34,-1.5,0.09,2.12,1.05,0,">1 nonsynonymous","L122R V153A F167L",3
"lib2","SARS-CoV-2","CTGTCAATAGATCTTT",4,12.63,10.66,-0.17,0.07,2.97,1.03,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","CTGTCAATTAGTAATA",2,42.75,6,-4.84,1.26,1.5,1.16,0.02,">1 nonsynonymous","K56P G86M P96S S147A",4
"lib2","SARS-CoV-2","CTGTCACACATCTCTG",4,69.4,6,-4.84,1.65,3,1.19,0,">1 nonsynonymous","I28L I88F R136D",3
"lib2","SARS-CoV-2","CTGTCACACTAAGCCT",5,46.76,10.96,0.13,0.04,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","CTGTCACATTGATAAT",4,38.47,10.96,0.12,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTCACCTTTATCCA",1,6.73,11.09,0.25,0.19,2.89,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTGTCACTAAAGAAAG",4,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V F44I R127I T201F",4
"lib2","SARS-CoV-2","CTGTCACTTGTAAAAG",3,1.79,NA,NA,NA,NA,NA,NA,"stop","D68E K128Y E141*",3
"lib2","SARS-CoV-2","CTGTCAGAAAAAAGCA",1,5.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I V103E Q176S",3
"lib2","SARS-CoV-2","CTGTCAGAGCAACTAA",7,90.7,9.21,-1.62,0.05,2.89,1.17,0,"1 nonsynonymous","F126Y",1
"lib2","SARS-CoV-2","CTGTCATATTCTTTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94A W106T",2
"lib2","SARS-CoV-2","CTGTCATCACGTTGTA",9,79.75,10.82,-0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTCATTTTAGTGTT",1,10.41,10.82,-0.01,0.08,2.98,1.05,0,"1 nonsynonymous","S53Y",1
"lib2","SARS-CoV-2","CTGTCCAAAAGTTACA",1,31.45,10.89,0.06,0.06,2.95,1.08,0,"1 nonsynonymous","S36D",1
"lib2","SARS-CoV-2","CTGTCCAAGGTAAGAT",3,32.85,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","L60I G101C",2
"lib2","SARS-CoV-2","CTGTCCAGATCCTAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A18D C102T G174M",4
"lib2","SARS-CoV-2","CTGTCCCAAACACCAA",4,38.89,8.6,-2.24,0.33,1.5,1,0.04,">1 nonsynonymous","N58V W106C",2
"lib2","SARS-CoV-2","CTGTCCCTATATGATA",12,18.87,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","R73V F99M N107S D137F F185I T201R",6
"lib2","SARS-CoV-2","CTGTCCCTCCTTAACC",2,25.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E154H R179A",2
"lib2","SARS-CoV-2","CTGTCCGATAAATGGT",3,97.48,10.1,-0.73,0.03,2.84,1.06,0,">1 nonsynonymous","S69M C195S",2
"lib2","SARS-CoV-2","CTGTCCGTTCTGTGAC",12,2.99,NA,NA,NA,NA,NA,NA,"stop","G9R K26* K94M D98R E135L",5
"lib2","SARS-CoV-2","CTGTCCTCGCAGTCTA",1,29.42,6.85,-3.99,0.53,1.5,1.27,0.05,">1 nonsynonymous","F8R N120L P149I",3
"lib2","SARS-CoV-2","CTGTCCTTTGGCTTAA",7,190.11,9.89,-0.95,0.05,2.8,1.08,0,"1 nonsynonymous","Y121A",1
"lib2","SARS-CoV-2","CTGTCGACAGATACCG",11,181.45,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26T S43V G86Q N107K Y178V",5
"lib2","SARS-CoV-2","CTGTCGACTGTAACCG",7,16.78,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I72H P82S D97P W106M R136I",5
"lib2","SARS-CoV-2","CTGTCGATCTATGGAT",1,0.3,NA,NA,NA,NA,NA,NA,"stop","C6* R78I I88Q T140R T170*",5
"lib2","SARS-CoV-2","CTGTCGCGATGGCTTT",15,242.34,10.84,0.01,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTCGGCATAGAGGC",4,17.93,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F44C Q84R D90C F126K",4
"lib2","SARS-CoV-2","CTGTCGGCATTAGAAA",15,96.14,6.38,-4.45,0.64,1.5,1.23,0.03,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","CTGTCGGTTATATGAT",8,55.14,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","F44R N110L R124S",3
"lib2","SARS-CoV-2","CTGTCTAAATATAGGA",3,21.85,6.59,-4.25,0.52,1.5,1.07,0.05,">1 nonsynonymous","S45H G74L F134T",3
"lib2","SARS-CoV-2","CTGTCTATAAACATCT",8,199.31,10.51,-0.33,0.04,2.97,1,0,">1 nonsynonymous","V11L G152A A192D",3
"lib2","SARS-CoV-2","CTGTCTATCCTAAGAA",9,29.66,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5R C49F L57I G74A N151G",5
"lib2","SARS-CoV-2","CTGTCTCCGAACTTTC",2,6.28,7.04,-3.8,0.47,1.5,1.04,0.07,">1 nonsynonymous","A14V I88A",2
"lib2","SARS-CoV-2","CTGTCTCGTTTAAATC",4,59.79,10.63,-0.21,0.07,2.74,1.15,0,">1 nonsynonymous","I138S S164P",2
"lib2","SARS-CoV-2","CTGTCTGCCCCCGCTA",8,51.31,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14W R78H G116V L125T E141W",5
"lib2","SARS-CoV-2","CTGTCTGCTGTCCAAT",1,54.38,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D59F G117M Q176S",3
"lib2","SARS-CoV-2","CTGTCTGGGTAACACA",4,56.4,7.85,-2.99,0.33,1.5,1.15,0.03,">1 nonsynonymous","E76T Q84L T100F",3
"lib2","SARS-CoV-2","CTGTCTGTGAATAACA",12,126.48,8.8,-2.04,0.07,1.9,1.1,0,">1 nonsynonymous","A42I K48W K114N N120M K198L",5
"lib2","SARS-CoV-2","CTGTCTTAATCAAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K Y50N Y143W",3
"lib2","SARS-CoV-2","CTGTCTTATAAAATGG",1,7.12,6.32,-4.52,1.73,2.31,1.13,0.01,">1 nonsynonymous","Y93T R127P F185V",3
"lib2","SARS-CoV-2","CTGTCTTGACTAGCTG",2,16.24,10.71,-0.13,0.07,2.87,1.15,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","CTGTCTTTGATCTCCT",2,19.51,9.56,-1.28,0.07,2.94,1.06,0,">1 nonsynonymous","F62L Y143M",2
"lib2","SARS-CoV-2","CTGTGAAAGACATAAC",7,31.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51F G101P",2
"lib2","SARS-CoV-2","CTGTGAACAAGCAGAG",2,16.41,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","T15I C61V Y119K Y165Q P177M",5
"lib2","SARS-CoV-2","CTGTGAAGCAGACAAC",15,69.87,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F44W V77E Q168K",3
"lib2","SARS-CoV-2","CTGTGAATACTACTAA",10,82.22,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","G86I P133L",2
"lib2","SARS-CoV-2","CTGTGAATGACACAGC",8,98.46,10.49,-0.35,0.03,2.91,1.08,0,">1 nonsynonymous","I2H G83D",2
"lib2","SARS-CoV-2","CTGTGACACTCAATCT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G9* E154*",2
"lib2","SARS-CoV-2","CTGTGACCCGTTTCCA",11,270.05,10.82,-0.02,0.04,2.93,1.09,0,">1 nonsynonymous","L95I K199Y",2
"lib2","SARS-CoV-2","CTGTGACTAAAGCACG",3,48.36,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Q84M D97F Q144S C158F",4
"lib2","SARS-CoV-2","CTGTGACTTTTCAGAG",3,67.36,8.76,-2.08,0.09,2.63,1.03,0,">1 nonsynonymous","Y119F Y165F",2
"lib2","SARS-CoV-2","CTGTGAGAAACCAATA",8,115.46,9.91,-0.93,0.1,2.34,1.05,0,"1 nonsynonymous","F8T",1
"lib2","SARS-CoV-2","CTGTGAGCAATACTAA",7,146.69,10.87,0.03,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTGAGCCGCAGCGC",7,11.74,9.55,-1.29,0.14,1.86,1.3,0.01,">1 nonsynonymous","G9Y A22S L38F S43F",4
"lib2","SARS-CoV-2","CTGTGAGTAAAAAAAG",3,87.83,10.7,-0.13,0.05,2.94,1.05,0,">1 nonsynonymous","N4T D90L",2
"lib2","SARS-CoV-2","CTGTGATAATCGCACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117A T140M",2
"lib2","SARS-CoV-2","CTGTGATCCATATTCC",10,3.55,NA,NA,NA,NA,NA,NA,"stop","G9* R16W",2
"lib2","SARS-CoV-2","CTGTGATGCCGTTAAG",5,24.25,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F99P E141P Q163K",3
"lib2","SARS-CoV-2","CTGTGATGTACTTATA",1,43.45,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9S D98T Y119M F156L F167T",5
"lib2","SARS-CoV-2","CTGTGCAAAAGCGTAA",10,237.14,10.84,0.01,0.05,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTGCACCAAGAATA",3,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M T55K I72L G86C K94V T170I",6
"lib2","SARS-CoV-2","CTGTGCCAATCCAGGA",1,0.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A192Q",1
"lib2","SARS-CoV-2","CTGTGCCGGGACACCA",10,3.99,NA,NA,NA,NA,NA,NA,"stop","N24F K56N N107* C158A G174V",5
"lib2","SARS-CoV-2","CTGTGCCGGTTCATAA",4,39.01,10.53,-0.31,0.07,2.9,1.11,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","CTGTGCCTAATTTTTG",4,88.71,10.73,-0.11,0.04,2.96,1.06,0,">1 nonsynonymous","P7D T55C",2
"lib2","SARS-CoV-2","CTGTGCGACGTTAAGA",7,52.66,10.16,-0.68,0.05,2.73,1.05,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","CTGTGCGATCATTACC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R N118I Q144K",3
"lib2","SARS-CoV-2","CTGTGCTATTAAACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I L57M D90T P149M",4
"lib2","SARS-CoV-2","CTGTGCTCCAAAAACG",7,79.1,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D34R L57S F167A",3
"lib2","SARS-CoV-2","CTGTGCTTCACCAACA",3,90.23,10.61,-0.22,0.05,2.98,1.02,0,">1 nonsynonymous","F62M I138Q Q168R",3
"lib2","SARS-CoV-2","CTGTGGAAAAATGGAA",2,7.14,10.28,-0.55,0.09,3,1.01,0,">1 nonsynonymous","D97I G152T",2
"lib2","SARS-CoV-2","CTGTGGAAAATGCTAG",5,39.04,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94T Y143W G174Q E186Y",4
"lib2","SARS-CoV-2","CTGTGGCTCTATGGAG",15,101.63,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9L F62G N109L Y143Q G166M",5
"lib2","SARS-CoV-2","CTGTGTCAACATTTTA",8,44.92,7.68,-3.15,0.33,1.5,1.23,0.04,">1 nonsynonymous","A33G Y50S",2
"lib2","SARS-CoV-2","CTGTGTCAACGATCTG",5,1.26,NA,NA,NA,NA,NA,NA,"stop","N58E R136*",2
"lib2","SARS-CoV-2","CTGTGTCCTCGGCGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N110* N157S",2
"lib2","SARS-CoV-2","CTGTGTCTGAATCGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I G86C D97Y N107Q",4
"lib2","SARS-CoV-2","CTGTGTCTGCTAAAGT",1,36.38,8.34,-2.49,0.17,2.18,1.06,0.01,">1 nonsynonymous","C6Q Y119W",2
"lib2","SARS-CoV-2","CTGTGTGACATTTTCT",7,82,10.14,-0.7,0.07,2.66,1.06,0,">1 nonsynonymous","K48M F134E",2
"lib2","SARS-CoV-2","CTGTGTTAAACCCTAC",3,28.5,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","I88K Y123H",2
"lib2","SARS-CoV-2","CTGTGTTAGCCCAACC",1,59.22,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V32E D59V G86D A105L L122F",5
"lib2","SARS-CoV-2","CTGTTAAAAATTGGAG",4,15.48,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G86T L95Q N107S T140S T170S",5
"lib2","SARS-CoV-2","CTGTTAAAACACTAAT",7,177.54,7.31,-3.52,0.15,1.93,1.15,0.01,">1 nonsynonymous","T148I C158A",2
"lib2","SARS-CoV-2","CTGTTAAAACATTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A33T N40C T46* D68Q T201S",5
"lib2","SARS-CoV-2","CTGTTAACAAACGCTG",3,45.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S29G L95Q Y175I",3
"lib2","SARS-CoV-2","CTGTTAACACGCAGAA",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28G N64T N120M Y143H F160G",5
"lib2","SARS-CoV-2","CTGTTAATACTGCCAA",2,13.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45I S53G L95T G116L E141L N171M",6
"lib2","SARS-CoV-2","CTGTTACAAAAATCTA",1,11.77,9.25,-1.59,0.28,1.5,1.05,0.04,">1 nonsynonymous","F17L D59C",2
"lib2","SARS-CoV-2","CTGTTACATAAGACCA",7,104.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T15P A105F K128S P177L",4
"lib2","SARS-CoV-2","CTGTTACTCCTAAATC",1,15.05,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6S Y121K Y175V",3
"lib2","SARS-CoV-2","CTGTTACTTTCATAAT",7,96.4,9.93,-0.9,0.04,2.81,1.06,0,">1 nonsynonymous","L122R Q176K",2
"lib2","SARS-CoV-2","CTGTTAGACTAACACC",7,49.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11F C49V D97L T148V Q168L",5
"lib2","SARS-CoV-2","CTGTTAGAGGGAAAAC",1,2.2,NA,NA,NA,NA,NA,NA,"stop","L5* G86D I104L E154Q",4
"lib2","SARS-CoV-2","CTGTTAGCAGCCTCCA",16,1.39,NA,NA,NA,NA,NA,NA,"stop","F12A V180*",2
"lib2","SARS-CoV-2","CTGTTAGGAGCAAGCC",4,2.28,NA,NA,NA,NA,NA,NA,"stop","F62V K94H Y165*",3
"lib2","SARS-CoV-2","CTGTTAGGAGTAACGA",3,15.9,9.93,-0.9,0.11,2.13,1.01,0,">1 nonsynonymous","I104M D112I",2
"lib2","SARS-CoV-2","CTGTTAGTATGAAATC",8,94.26,10.73,-0.11,0.04,3,1.02,0,">1 nonsynonymous","N64F T201F",2
"lib2","SARS-CoV-2","CTGTTATAACATGAGC",10,117.29,11.05,0.21,0.04,2.92,1.08,0,">1 nonsynonymous","K114A Y121F Q168H",3
"lib2","SARS-CoV-2","CTGTTATCAAACTGAC",3,23.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16G G83R G101F G174R",4
"lib2","SARS-CoV-2","CTGTTATGACTCCACG",1,45.22,10.91,0.07,0.06,2.86,1.15,0,"1 nonsynonymous","S129T",1
"lib2","SARS-CoV-2","CTGTTATGACTTAATT",11,219.52,8.99,-1.85,0.05,2.9,1.08,0,">1 nonsynonymous","S41T D98M P149R F156E A192P P197K",6
"lib2","SARS-CoV-2","CTGTTATGATATATCG",10,55.73,9.98,-0.86,0.1,2.32,1.07,0,">1 nonsynonymous","D34N N107G",2
"lib2","SARS-CoV-2","CTGTTATGGGAATAGT",5,176.22,9.24,-1.59,0.07,2.37,1.07,0,">1 nonsynonymous","V115K Y121T",2
"lib2","SARS-CoV-2","CTGTTATTATAGATGC",7,0.27,NA,NA,NA,NA,NA,NA,"stop","N4H V11* S45T T55R W106A S139*",6
"lib2","SARS-CoV-2","CTGTTATTATGATTCA",13,76.13,10.37,-0.46,0.05,2.96,1,0,">1 nonsynonymous","E10C P149Q P197T",3
"lib2","SARS-CoV-2","CTGTTCACTCTTAATG",12,170.6,9.1,-1.74,0.05,2.92,1.07,0,">1 nonsynonymous","V115M E154Y",2
"lib2","SARS-CoV-2","CTGTTCAGAACGCTAG",2,15.67,6,-4.84,2,3,1.13,0.01,"1 nonsynonymous","L131W",1
"lib2","SARS-CoV-2","CTGTTCAGTAAAGACA",1,11.22,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F17S C31V I104N T201Q",4
"lib2","SARS-CoV-2","CTGTTCCAAACGCGTT",12,209.31,10.76,-0.07,0.03,2.95,1.06,0,"1 nonsynonymous","N1I",1
"lib2","SARS-CoV-2","CTGTTCCCGTCCTGGC",18,125.5,6,-4.84,2,2.88,1.15,0,">1 nonsynonymous","L38A G83V Y119N Y159K",4
"lib2","SARS-CoV-2","CTGTTCCGAGACAATA",6,51.61,6.86,-3.97,0.32,1.5,1.16,0.02,"1 nonsynonymous","C49E",1
"lib2","SARS-CoV-2","CTGTTCCTAGTTCTCG",3,1.44,NA,NA,NA,NA,NA,NA,"stop","E10* K128F Y143A",3
"lib2","SARS-CoV-2","CTGTTCCTTACGATTT",2,7.15,8.69,-2.14,0.36,2.51,1.1,0.05,">1 nonsynonymous","F12E N58D K87T P96Q T170S",5
"lib2","SARS-CoV-2","CTGTTCGCATATGGTC",3,44.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5D T63Y A67T F167Q",4
"lib2","SARS-CoV-2","CTGTTCGCCAGCATAT",11,3.37,NA,NA,NA,NA,NA,NA,"stop","L95R L122* Q163R",3
"lib2","SARS-CoV-2","CTGTTCGTATCAAAAC",9,0.98,NA,NA,NA,NA,NA,NA,"stop","S19* D34W D90R",3
"lib2","SARS-CoV-2","CTGTTCTAAAAGTCCA",3,54.34,10.96,0.13,0.08,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTTCTACCAAGCAA",9,80.24,9.5,-1.34,0.27,1.5,1,0.03,">1 nonsynonymous","V37L C49V Y66I D90M",4
"lib2","SARS-CoV-2","CTGTTGAACAACCGAT",8,1.11,NA,NA,NA,NA,NA,NA,"stop","L60A D68L L125*",3
"lib2","SARS-CoV-2","CTGTTGAATCTATTAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","A14R C31K N58* C61A A89M G166T",6
"lib2","SARS-CoV-2","CTGTTGACCGCATAAC",1,38.97,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S36Y L60G A105V L122C C150V N157S",6
"lib2","SARS-CoV-2","CTGTTGATGCTCATTA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","Y91G I104E N120*",3
"lib2","SARS-CoV-2","CTGTTGCAGTTTGACC",4,47.61,6,-4.84,0.94,2.48,1.11,0,">1 nonsynonymous","K94Q D112A",2
"lib2","SARS-CoV-2","CTGTTGCGAACCAACT",4,111.7,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6G V32N A81V Q144I C158M P197A",6
"lib2","SARS-CoV-2","CTGTTGCTTCGTGGCC",1,8.87,10.6,-0.24,0.09,3,1,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","CTGTTGTTCCTCATTA",7,220.34,9.19,-1.65,0.04,2.43,1.05,0,">1 nonsynonymous","G9D T55M I142M Q176L",4
"lib2","SARS-CoV-2","CTGTTTAATACGCGCA",8,41.1,8.53,-2.3,0.22,1.5,1.06,0.03,">1 nonsynonymous","D90L R127L",2
"lib2","SARS-CoV-2","CTGTTTAATCCCATGA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","N4L I28* V37D G86D K114S K128L Q144G P149H F167C",9
"lib2","SARS-CoV-2","CTGTTTACTATCCCTA",2,45.44,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L162P Y175G S184F T201S",4
"lib2","SARS-CoV-2","CTGTTTAGAGAAAATA",14,186.3,10.83,-0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTTTAGGATTGTTG",5,132.22,10.87,0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTTTCAGACCCACG",8,125.05,8.17,-2.66,0.15,1.6,1.12,0.01,">1 nonsynonymous","N107V N120S E154D",3
"lib2","SARS-CoV-2","CTGTTTCCCCAGCCTA",5,72.41,6.15,-4.68,0.76,1.5,1.2,0.02,">1 nonsynonymous","V77E T100W",2
"lib2","SARS-CoV-2","CTGTTTCGAACTTCTC",9,73.99,6.2,-4.63,0.62,1.5,1.18,0.01,">1 nonsynonymous","L5S N24E V37R T46Q V103L N151S",6
"lib2","SARS-CoV-2","CTGTTTCGAAGACTTG",3,16.38,6.12,-4.71,1.25,1.5,1.17,0.06,">1 nonsynonymous","K48R I88V D137P A192E",4
"lib2","SARS-CoV-2","CTGTTTGACGTTCGCG",2,19.51,6.01,-4.82,1.61,1.5,1.18,0.04,">1 nonsynonymous","D68H I138S C158N",3
"lib2","SARS-CoV-2","CTGTTTTAAACGGATC",17,7.54,NA,NA,NA,NA,NA,NA,"stop","F17* A81M V103A R136L Y143Q",5
"lib2","SARS-CoV-2","CTGTTTTAAAGAAAAC",2,1.47,NA,NA,NA,NA,NA,NA,"stop","T63M N171*",2
"lib2","SARS-CoV-2","CTGTTTTAATGCGATG",3,16.31,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5V A81G I88P",3
"lib2","SARS-CoV-2","CTGTTTTCCTTGTTCG",5,3.65,NA,NA,NA,NA,NA,NA,"stop","A18V Q84H K114* T201K",4
"lib2","SARS-CoV-2","CTGTTTTCTCCGTAGC",5,86.06,10.84,0,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTGTTTTGACCACCCG",1,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L Y50F",2
"lib2","SARS-CoV-2","CTGTTTTGACGTAGGA",6,21.95,10.45,-0.38,0.34,2.16,1,0.06,"wildtype","",0
"lib2","SARS-CoV-2","CTGTTTTGGCTCAACT",6,70.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7Y N92M",2
"lib2","SARS-CoV-2","CTGTTTTTATAACGAA",11,108.19,9.27,-1.57,0.07,2.84,1.1,0,">1 nonsynonymous","L125T F134C G146S",3
"lib2","SARS-CoV-2","CTGTTTTTTCACTCAT",2,54.73,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y121G E154H P177E",3
"lib2","SARS-CoV-2","CTTAAAAAAAACTTAG",9,126.04,8.6,-2.23,0.14,1.6,1.19,0.01,"1 nonsynonymous","F47E",1
"lib2","SARS-CoV-2","CTTAAAAAAACGTAAT",1,2.96,NA,NA,NA,NA,NA,NA,"stop","L5I S41* K56N D97Y A105T",5
"lib2","SARS-CoV-2","CTTAAAAAAATCCGAC",4,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99G I104Y P169Y V181S",4
"lib2","SARS-CoV-2","CTTAAAAACTCGAACT",7,17.59,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","S19N I104E V180T",3
"lib2","SARS-CoV-2","CTTAAAAATATCGCGA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3G N13H S41C P82T Y119L",5
"lib2","SARS-CoV-2","CTTAAAAATGATAAGG",1,17.32,10.87,0.03,0.15,3,1.05,0.01,">1 nonsynonymous","S129G T140E",2
"lib2","SARS-CoV-2","CTTAAAAATTTAAAAA",5,74.87,10.79,-0.05,0.05,2.86,1.12,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","CTTAAAACACGCATCG",2,2.55,NA,NA,NA,NA,NA,NA,"stop","A14P N107*",2
"lib2","SARS-CoV-2","CTTAAAACACGCTATA",9,52.51,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R127K R136D",2
"lib2","SARS-CoV-2","CTTAAAACACTAAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","F17* Y119W",2
"lib2","SARS-CoV-2","CTTAAAACAGGGTGAC",5,1.5,NA,NA,NA,NA,NA,NA,"stop","E10* L122S S139F",3
"lib2","SARS-CoV-2","CTTAAAACATACTAAT",9,85.77,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W23S F156L Q168L",3
"lib2","SARS-CoV-2","CTTAAAACCCATAGAT",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D N107V",2
"lib2","SARS-CoV-2","CTTAAAACCTACGTAT",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100P T148Y",2
"lib2","SARS-CoV-2","CTTAAAACCTTGCGAC",1,29.78,8,-2.83,0.18,2.53,1.07,0.01,">1 nonsynonymous","T55F D90T L125K",3
"lib2","SARS-CoV-2","CTTAAAAGACACGCCT",7,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y Y50M F62S G146L",4
"lib2","SARS-CoV-2","CTTAAAAGCAACGGAG",3,6.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T C61M F99I N151H S200H",5
"lib2","SARS-CoV-2","CTTAAAAGGAAGTATT",3,53.17,9.5,-1.33,0.12,1.72,1.12,0.01,">1 nonsynonymous","S43I C49W Y178M",3
"lib2","SARS-CoV-2","CTTAAAATATATAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R L131E Q163T L188M",4
"lib2","SARS-CoV-2","CTTAAAATTTAAGAAT",13,4.12,NA,NA,NA,NA,NA,NA,"stop","V77L Y93T R127* P149T Y159R",5
"lib2","SARS-CoV-2","CTTAAACAAAGATATT",3,12.94,10.84,0,0.04,2.96,1.06,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","CTTAAACACAGAACGC",4,26.74,10.78,-0.06,0.06,2.78,1.24,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","CTTAAACCACCTCAAA",2,131.77,10.88,0.05,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAAACCCCGCTACA",2,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93R T148M C158G",3
"lib2","SARS-CoV-2","CTTAAACCCGGGATAA",8,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87F F160P",2
"lib2","SARS-CoV-2","CTTAAACCGAATAAGA",1,17.24,6,-4.84,2,1.5,1.19,0.06,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","CTTAAACCTTGACTCA",3,7.52,11.16,0.32,0.1,2.96,1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAAACGATAAGAAA",5,54.9,6.92,-3.92,0.2,1.77,1.17,0.01,">1 nonsynonymous","E10D C150D",2
"lib2","SARS-CoV-2","CTTAAACGATGAAACA",1,14.78,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","G9D Y93S",2
"lib2","SARS-CoV-2","CTTAAACGCAGCAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","S69E D90* W106C",3
"lib2","SARS-CoV-2","CTTAAACGGAATAAGC",1,14.72,6,-4.84,0.84,3,1.01,0,">1 nonsynonymous","K114V R179M",2
"lib2","SARS-CoV-2","CTTAAACGGATGATGG",2,9.94,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","V20R D90Y F99K",3
"lib2","SARS-CoV-2","CTTAAAGAACTCATAA",2,25.91,6,-4.84,2,2.57,1.07,0,">1 nonsynonymous","F62T I88K F156V",3
"lib2","SARS-CoV-2","CTTAAAGACGCGCGGC",27,343.71,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","Y35D P161R",2
"lib2","SARS-CoV-2","CTTAAAGAGAATTTGC",9,34.2,9.84,-0.99,0.12,1.93,1.05,0.01,">1 nonsynonymous","D97Y W106R",2
"lib2","SARS-CoV-2","CTTAAAGAGCAATTCA",2,22.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D59V K94M S113R I138W S164Y",5
"lib2","SARS-CoV-2","CTTAAAGATATGAAAG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F17* S41T L60K",3
"lib2","SARS-CoV-2","CTTAAAGATCCAAATT",2,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","CTTAAAGCAAATAACG",4,2.42,NA,NA,NA,NA,NA,NA,"stop","N107H I142*",2
"lib2","SARS-CoV-2","CTTAAAGCAATTGAGT",1,6.87,7.34,-3.5,0.4,1.5,1.09,0.07,">1 nonsynonymous","F8K T46C",2
"lib2","SARS-CoV-2","CTTAAAGGACGCCGTA",3,15.1,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","N1S I88Q I138C V173N",4
"lib2","SARS-CoV-2","CTTAAAGGCCTGTATC",5,99.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25I D34C Q84P L95I V103L Y178C",6
"lib2","SARS-CoV-2","CTTAAAGTACTCGGTT",3,18.16,10.8,-0.03,0.06,2.96,1,0,">1 nonsynonymous","N120C P197S",2
"lib2","SARS-CoV-2","CTTAAAGTAGCGGAAG",2,29.53,10.69,-0.15,0.09,2.94,1.09,0,"1 nonsynonymous","V52I",1
"lib2","SARS-CoV-2","CTTAAAGTATATGCAG",2,5.84,10.87,0.03,0.21,2.93,1.09,0,"1 nonsynonymous","A81E",1
"lib2","SARS-CoV-2","CTTAAAGTGACTTTTT",8,99.22,9.17,-1.67,0.09,2.28,1.08,0,">1 nonsynonymous","N4D E10P T15R P169M",4
"lib2","SARS-CoV-2","CTTAAAGTTTCACCCA",1,17.39,10.66,-0.18,0.09,2.96,1.04,0,"1 nonsynonymous","T46V",1
"lib2","SARS-CoV-2","CTTAAATCCCGAACCA",6,96.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A33G A42L G101Y Q144R Y165R",5
"lib2","SARS-CoV-2","CTTAAATCCGCGAGCA",5,43.5,10.31,-0.52,0.05,2.86,1.02,0,">1 nonsynonymous","A42D R127S K199R",3
"lib2","SARS-CoV-2","CTTAAATCCTTTCGAG",8,51.57,10.77,-0.06,0.05,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTAAATCGGCTTACT",3,131,10.02,-0.81,0.05,2.85,1.03,0,">1 nonsynonymous","N58Y G116H",2
"lib2","SARS-CoV-2","CTTAAATGTGATTAAA",2,42.3,10.86,0.03,0.05,2.96,1.06,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","CTTAAATTAAATACGA",4,120.33,10.83,0,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAAATTAACTATCG",10,80.23,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6E G86F",2
"lib2","SARS-CoV-2","CTTAACAAAAATATAA",1,24.12,10.74,-0.1,0.07,3,1.01,0,">1 nonsynonymous","R16W S43F",2
"lib2","SARS-CoV-2","CTTAACAAATATAAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28R Q79* N107H D137P F185Q",5
"lib2","SARS-CoV-2","CTTAACAATACTGATA",2,21.55,10.55,-0.28,0.05,2.99,1,0,">1 nonsynonymous","L5R V37D S139R A192E",4
"lib2","SARS-CoV-2","CTTAACAGCAGAATCA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","D59S V77* D112L",3
"lib2","SARS-CoV-2","CTTAACAGCCCCCACT",6,104.73,10.64,-0.2,0.03,2.93,1.07,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","CTTAACAGGATTTAAC",3,68.97,10.84,0.01,0.05,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTAACATAGAAAGCA",3,79.12,10.68,-0.15,0.04,2.98,1.04,0,">1 nonsynonymous","T148K V180I",2
"lib2","SARS-CoV-2","CTTAACATCCCTGTTA",6,85.26,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V77K Y91D",2
"lib2","SARS-CoV-2","CTTAACATGTCCAGGA",2,48.93,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G146L Y159C",2
"lib2","SARS-CoV-2","CTTAACATTCACAGTG",13,273.4,10.81,-0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAACCACCCAAGCT",5,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M Y91E",2
"lib2","SARS-CoV-2","CTTAACCCGGATATAC",1,21.04,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D59L L60V G83V V173Y",4
"lib2","SARS-CoV-2","CTTAACCTACAATGGA",9,67.37,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","D75L F99I V103H S113N S139K",5
"lib2","SARS-CoV-2","CTTAACCTACATGAGT",1,2.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183R",1
"lib2","SARS-CoV-2","CTTAACCTATCCTTAG",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G D75Y Q84V Y121N",4
"lib2","SARS-CoV-2","CTTAACCTCAGGTCAA",5,87.7,10.71,-0.13,0.06,2.92,1.08,0,"1 nonsynonymous","D59F",1
"lib2","SARS-CoV-2","CTTAACCTGTGATGCT",2,52.49,10.04,-0.79,0.06,2.58,1.09,0,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","CTTAACGAAGACATTC",11,138.12,8.23,-2.61,0.1,1.98,1.08,0,">1 nonsynonymous","N13L N157H",2
"lib2","SARS-CoV-2","CTTAACGATTACTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A81* Q144H",2
"lib2","SARS-CoV-2","CTTAACGGAACGAATG",7,109.07,10.65,-0.19,0.03,2.93,1.09,0,">1 nonsynonymous","V37S D59Y L131V",3
"lib2","SARS-CoV-2","CTTAACGTGTATACAG",5,5.48,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","T3H T15E Y50L L60M I142N G174R",6
"lib2","SARS-CoV-2","CTTAACGTTGACACAA",2,12.86,10.14,-0.7,0.11,2.43,1.1,0,">1 nonsynonymous","A18K K48N S139A K199L",4
"lib2","SARS-CoV-2","CTTAACTAACGACATC",7,2.2,NA,NA,NA,NA,NA,NA,"stop","W23R V52Y G83*",3
"lib2","SARS-CoV-2","CTTAACTAAGACACTA",10,151.23,7.94,-2.9,0.14,1.91,1.07,0.01,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","CTTAACTACTGATTAC",3,31.28,10.46,-0.37,0.04,2.99,1,0,">1 nonsynonymous","T3A P7H T85N",3
"lib2","SARS-CoV-2","CTTAACTTCGCAACAA",9,8.39,NA,NA,NA,NA,NA,NA,"stop","I2* K56T I80V A81E D98R",5
"lib2","SARS-CoV-2","CTTAAGAAAAAACTTT",5,1.76,NA,NA,NA,NA,NA,NA,"stop","Y66V K128* N157F Y165T",4
"lib2","SARS-CoV-2","CTTAAGAACAGGATAC",7,46.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V N107M P149I",3
"lib2","SARS-CoV-2","CTTAAGACCATATCTA",11,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G A145L",2
"lib2","SARS-CoV-2","CTTAAGACCATCCCTA",4,108.63,10.07,-0.77,0.08,2.62,1.03,0,">1 nonsynonymous","T15S I28A",2
"lib2","SARS-CoV-2","CTTAAGACGACAAGAA",1,8.63,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","F8C S19Q C102I P149R",4
"lib2","SARS-CoV-2","CTTAAGAGAATAACAC",6,41.47,9.7,-1.13,0.19,1.99,1.23,0.01,">1 nonsynonymous","A33R N64K S129F P149S",4
"lib2","SARS-CoV-2","CTTAAGATAAGCGAAG",1,29.79,6,-4.84,2,2.03,1.15,0.01,">1 nonsynonymous","G116A Y159G",2
"lib2","SARS-CoV-2","CTTAAGATGCACGTAG",5,119.72,9.93,-0.91,0.08,2.29,1.05,0,"1 nonsynonymous","K94G",1
"lib2","SARS-CoV-2","CTTAAGATTTAATTAC",4,44.93,10.3,-0.54,0.07,2.79,1.09,0,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","CTTAAGCATTGACAGC",5,77.44,10.87,0.04,0.06,2.99,1.03,0,"1 nonsynonymous","V37Q",1
"lib2","SARS-CoV-2","CTTAAGCCGTACTGGG",5,19.35,7.12,-3.72,0.46,1.5,1.03,0.05,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","CTTAAGCTAGTAGCTA",2,25.85,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N1L Y123N C150T",3
"lib2","SARS-CoV-2","CTTAAGCTCATAGAGT",13,66.46,6,-4.84,1.8,1.5,1.18,0.03,">1 nonsynonymous","A14M D59L S69G",3
"lib2","SARS-CoV-2","CTTAAGCTTAGTTGGA",3,49.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36G D68K P82V D90S",4
"lib2","SARS-CoV-2","CTTAAGGACCAAAACG",2,67.92,10.38,-0.46,0.04,2.85,1.04,0,"1 nonsynonymous","D34K",1
"lib2","SARS-CoV-2","CTTAAGGGAATGCCTA",7,3.23,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","CTTAAGGTATTACCCC",7,26.8,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","K87Y S139I V180A",3
"lib2","SARS-CoV-2","CTTAAGGTCATTCCGT",1,35.74,8.44,-2.4,0.17,1.68,1.14,0.02,">1 nonsynonymous","K94Y T170K",2
"lib2","SARS-CoV-2","CTTAAGGTGATAAACA",18,6.89,NA,NA,NA,NA,NA,NA,"stop","A14S S29K S41D A81V F126M Q176*",6
"lib2","SARS-CoV-2","CTTAAGTGAATAGAAT",3,8.22,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P82L P96D D98Y F134T F160L",5
"lib2","SARS-CoV-2","CTTAAGTGCATCCTCT",2,30.34,10.82,-0.01,0.04,2.84,1.16,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","CTTAAGTTATACATAC",13,57.9,8.82,-2.01,0.09,1.95,1.09,0,">1 nonsynonymous","V11E V173G C195L",3
"lib2","SARS-CoV-2","CTTAAGTTTACAAATT",3,19.71,6.64,-4.19,0.19,2.19,1.06,0.01,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","CTTAAGTTTCTACAAA",2,61.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82N Y121S E141N",3
"lib2","SARS-CoV-2","CTTAATAAAAATTAGC",3,142.14,9.79,-1.04,0.08,2.01,1.02,0,">1 nonsynonymous","G51V L60Q L187V T201K",4
"lib2","SARS-CoV-2","CTTAATAAACAACGGG",2,0.17,NA,NA,NA,NA,NA,NA,"stop","V37T Y119L E154H F185*",4
"lib2","SARS-CoV-2","CTTAATAAATAACTCC",1,12.64,6,-4.84,2,3,1.04,0,">1 nonsynonymous","Q84K A89I L131Y",3
"lib2","SARS-CoV-2","CTTAATAACTATTCAT",1,5.69,6,-4.84,2,1.5,1.43,0.06,">1 nonsynonymous","P96F T140K",2
"lib2","SARS-CoV-2","CTTAATAAGAATAGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","A14R R73* A81P A145F G155A",5
"lib2","SARS-CoV-2","CTTAATAAGTCGGATA",15,136.96,8.85,-1.99,0.12,1.5,1.08,0.01,">1 nonsynonymous","F12E K128V",2
"lib2","SARS-CoV-2","CTTAATAATCGCGACC",1,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L A33S Y123N",3
"lib2","SARS-CoV-2","CTTAATACAGCTGATC",7,26.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71G",1
"lib2","SARS-CoV-2","CTTAATACCCTAAACA",1,19.01,10.9,0.06,0.05,2.97,1.03,0,">1 nonsynonymous","T55L I80V L188S",3
"lib2","SARS-CoV-2","CTTAATAGCATTGTTG",11,172.31,8.43,-2.41,0.09,1.94,1.08,0,">1 nonsynonymous","V77M N118F",2
"lib2","SARS-CoV-2","CTTAATAGGCTAGCAT",1,26.2,10.75,-0.08,0.04,3,1,0,"1 nonsynonymous","S184Y",1
"lib2","SARS-CoV-2","CTTAATATGTCATGAG",2,17.33,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","P7A R27Q N107I Y123K K198F",5
"lib2","SARS-CoV-2","CTTAATATGTCCATTG",9,311.97,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18Q G86S N109I Y175P",4
"lib2","SARS-CoV-2","CTTAATATTATTATTG",6,61.02,9.88,-0.96,0.08,2.1,1.13,0,">1 nonsynonymous","D90I K128N E141N",3
"lib2","SARS-CoV-2","CTTAATCAAATAATAA",7,104.87,8.49,-2.35,0.08,2.63,1.07,0,">1 nonsynonymous","F44R Y119H G166L",3
"lib2","SARS-CoV-2","CTTAATCAAGTTCATT",10,24.81,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","V37D P54S Y66Q P96R K114L C158H",6
"lib2","SARS-CoV-2","CTTAATCATATACTAA",4,79.6,7.91,-2.93,0.15,1.5,1.08,0.01,">1 nonsynonymous","C61W R73A F99Y",3
"lib2","SARS-CoV-2","CTTAATCATCCCCACT",10,118.44,10.47,-0.37,0.04,2.93,1.04,0,">1 nonsynonymous","A33K S43R F62T",3
"lib2","SARS-CoV-2","CTTAATCCATTGTTTG",5,20.74,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C6L G101D",2
"lib2","SARS-CoV-2","CTTAATCCCAGCCTCT",5,96.86,8.15,-2.68,0.25,1.5,1.09,0.02,">1 nonsynonymous","F12Y P96D S184V",3
"lib2","SARS-CoV-2","CTTAATCGAAAGGCTG",4,50.12,7.28,-3.56,0.29,1.5,1.1,0.02,">1 nonsynonymous","F99T L125V",2
"lib2","SARS-CoV-2","CTTAATCGCGATAGTA",3,26.82,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A14R F47T C102D P149C",4
"lib2","SARS-CoV-2","CTTAATCTAAAAAAGG",10,290.52,10.8,-0.03,0.04,2.92,1.09,0,"1 nonsynonymous","L187Q",1
"lib2","SARS-CoV-2","CTTAATCTACTGAGAG",2,64.77,10.74,-0.09,0.05,2.94,1.08,0,">1 nonsynonymous","D97G A192S K198A",3
"lib2","SARS-CoV-2","CTTAATCTCCAATGTG",7,101.65,10.26,-0.58,0.04,2.87,1.04,0,">1 nonsynonymous","K56T A81T",2
"lib2","SARS-CoV-2","CTTAATCTCCCGCTTG",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38C T140H F167L V180H",4
"lib2","SARS-CoV-2","CTTAATCTTTATACTA",7,61.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y91M D98F G117V",3
"lib2","SARS-CoV-2","CTTAATGAACAAGAAA",2,106.07,9.09,-1.74,0.06,2.89,1.09,0,">1 nonsynonymous","Y119C T140S",2
"lib2","SARS-CoV-2","CTTAATGAGTATTAAT",3,40.9,6,-4.84,2,3,1.04,0,">1 nonsynonymous","V103W F156G",2
"lib2","SARS-CoV-2","CTTAATGCAATAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P I104C P133V",3
"lib2","SARS-CoV-2","CTTAATGCCATGAAAT",4,31.49,6.33,-4.51,0.41,1.68,1.12,0.01,">1 nonsynonymous","N130S D137G P149N",3
"lib2","SARS-CoV-2","CTTAATGCCATGAACA",5,72.49,10.07,-0.76,0.04,2.93,1.05,0,"1 nonsynonymous","R73T",1
"lib2","SARS-CoV-2","CTTAATGCCCGCAGCA",11,90.27,10.59,-0.24,0.03,2.99,1,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","CTTAATGCTCCACAAA",13,143.54,10.8,-0.04,0.07,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAATGGCAATCCCC",2,0.37,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","CTTAATGGCCCTGGCA",7,120.53,9.56,-1.28,0.05,2.02,1.07,0,">1 nonsynonymous","I2V Y35H Q144V",3
"lib2","SARS-CoV-2","CTTAATGTAGTACTAC",2,26.49,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Y93K S129T",2
"lib2","SARS-CoV-2","CTTAATGTAGTTGCGT",9,58.1,8,-2.83,0.2,1.5,1.06,0.02,">1 nonsynonymous","C6D W106K I138Y",3
"lib2","SARS-CoV-2","CTTAATGTATGAGATT",12,0.82,NA,NA,NA,NA,NA,NA,"stop","P82* V115L Q144H",3
"lib2","SARS-CoV-2","CTTAATTAAAATAGCA",15,101.01,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I2H F17L A42W D59N I142S",5
"lib2","SARS-CoV-2","CTTAATTAATAACATA",2,53.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8P S113V N120Q T148N",4
"lib2","SARS-CoV-2","CTTAATTACAACTAGA",1,15.19,10.06,-0.78,0.12,2.62,1.18,0.01,">1 nonsynonymous","G9A V77R",2
"lib2","SARS-CoV-2","CTTAATTACCCTAGAA",2,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K P54L K56L P82F N120L",5
"lib2","SARS-CoV-2","CTTAATTACTGAAATA",1,25.85,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I2D E10N Y143N Q168L",4
"lib2","SARS-CoV-2","CTTAATTATGCGCCCC",1,9.88,8.93,-1.91,0.18,1.5,1,0.02,">1 nonsynonymous","L5Q R25S S139M",3
"lib2","SARS-CoV-2","CTTAATTCCACTAACA",2,72.04,9.89,-0.95,0.11,2.38,1.04,0,">1 nonsynonymous","R27T T46Y A81I",3
"lib2","SARS-CoV-2","CTTAATTGCATTGTCT",3,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E N107F",2
"lib2","SARS-CoV-2","CTTAATTGGAAATGAC",8,73.45,7.2,-3.64,0.25,1.5,1.14,0.01,">1 nonsynonymous","K26T S43N G172S",3
"lib2","SARS-CoV-2","CTTAATTGTAAAAATA",3,46.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16P C61K Y119L P177R",4
"lib2","SARS-CoV-2","CTTAATTTTATCACAT",3,92.43,10.27,-0.57,0.07,2.87,1,0,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","CTTACAAAAAACGAAT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","F12I G51C L60*",3
"lib2","SARS-CoV-2","CTTACAAAAAGTCACT",18,228.4,9.91,-0.93,0.05,2.22,1.04,0,">1 nonsynonymous","V32K F99L",2
"lib2","SARS-CoV-2","CTTACAAAATAAAACG",1,9.16,10.88,0.04,0.2,2.67,1.36,0.01,">1 nonsynonymous","T55I L122M",2
"lib2","SARS-CoV-2","CTTACAAAATTAACAT",6,23,10.46,-0.38,0.06,2.68,1.28,0,">1 nonsynonymous","L38I D90G L122Y Q168F",4
"lib2","SARS-CoV-2","CTTACAAAATTTCTAA",3,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q Y39N D112W",3
"lib2","SARS-CoV-2","CTTACAAACACACTAA",3,14.58,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D59F F99R W106S S113T Y165W",5
"lib2","SARS-CoV-2","CTTACAAAGTAACCCA",2,9.82,8.91,-1.92,0.09,3,1,0,">1 nonsynonymous","I138T P149V G166R",3
"lib2","SARS-CoV-2","CTTACAAATAATCAGC",6,34.9,6,-4.84,1.48,3,1.06,0,">1 nonsynonymous","L5S L95S",2
"lib2","SARS-CoV-2","CTTACAACAGAAACGG",2,68.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23R Y119T L131C",3
"lib2","SARS-CoV-2","CTTACAACATACCAAC",7,93.14,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","G172P",1
"lib2","SARS-CoV-2","CTTACAACCTATCACA",2,13.27,8.17,-2.67,0.27,2.43,1.03,0.03,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","CTTACAACTATGCGAT",7,211.58,7.37,-3.46,0.09,1.53,1.1,0,">1 nonsynonymous","Y35A G155S Q168K",3
"lib2","SARS-CoV-2","CTTACAACTTAAAGAG",1,24.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R F167C R179Q K198V",4
"lib2","SARS-CoV-2","CTTACACAAAAAATCC",3,14.79,6.31,-4.52,0.63,1.5,1.25,0.03,">1 nonsynonymous","F17P G83N Q144K G152S S184R",5
"lib2","SARS-CoV-2","CTTACACAAAATTTAA",2,95.05,8.36,-2.47,0.18,2.53,1.09,0.01,"1 nonsynonymous","Q176G",1
"lib2","SARS-CoV-2","CTTACACACGCCCTCC",3,0,NA,NA,NA,NA,NA,NA,"stop","N130*",1
"lib2","SARS-CoV-2","CTTACACCCAATCAGA",8,48.84,8.41,-2.43,0.15,2.01,1.1,0.01,">1 nonsynonymous","N64L L125Y R136I",3
"lib2","SARS-CoV-2","CTTACACCCAGAAGCG",3,0.65,NA,NA,NA,NA,NA,NA,"stop","C61* I80E S139P Q168R",4
"lib2","SARS-CoV-2","CTTACACCGAGTAACG",1,17.82,10.13,-0.71,0.07,2.86,1,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","CTTACACGAAAAAAAA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","N107G D112*",2
"lib2","SARS-CoV-2","CTTACACGATAAGTAC",2,36.79,6.06,-4.78,0.39,1.84,1.11,0,">1 nonsynonymous","V20T V37R R124K F160A",4
"lib2","SARS-CoV-2","CTTACACGATCATGCT",12,156.28,10.72,-0.11,0.02,3,1.02,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","CTTACACGGCATGTGA",7,133.14,9.23,-1.6,0.1,1.63,1.1,0,">1 nonsynonymous","S69E E141N",2
"lib2","SARS-CoV-2","CTTACACTCAAAGACA",3,219.92,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P7V V77E G155C",3
"lib2","SARS-CoV-2","CTTACACTCTGCCAAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","Y35G N120S P177*",3
"lib2","SARS-CoV-2","CTTACACTGAGGTTCA",11,23.05,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","W23C S41L C61V S113W F185N",5
"lib2","SARS-CoV-2","CTTACACTTGCAGGGA",2,58.11,10.12,-0.72,0.05,2.73,1.04,0,">1 nonsynonymous","E10V S43K A89T H189R",4
"lib2","SARS-CoV-2","CTTACAGACAAGAGTG",4,0.83,NA,NA,NA,NA,NA,NA,"stop","Y35H F44S N92*",3
"lib2","SARS-CoV-2","CTTACAGACTGATACT",3,78.48,10.85,0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTACAGGAGCCCTTT",8,50.7,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T15C N118T G155P",3
"lib2","SARS-CoV-2","CTTACAGGTAAGCGAT",4,49.64,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50H W106G P161E",3
"lib2","SARS-CoV-2","CTTACAGGTCCTTATC",10,115.68,9.82,-1.02,0.11,2.03,1.03,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","CTTACAGTCCAAAGAT",9,4.91,NA,NA,NA,NA,NA,NA,"stop","C6L C49L Q84* Y91V P96S P169A",6
"lib2","SARS-CoV-2","CTTACAGTTAATATAT",9,133.16,8.85,-1.99,0.06,2.94,1.08,0,">1 nonsynonymous","A42G F126R",2
"lib2","SARS-CoV-2","CTTACATACACTAAGA",5,63.49,10.05,-0.79,0.07,2.93,1.05,0,">1 nonsynonymous","Y35W V115C K128V",3
"lib2","SARS-CoV-2","CTTACATAGACTATGT",5,107.52,9.76,-1.08,0.05,2.61,1.06,0,">1 nonsynonymous","C31L C61Y S164A",3
"lib2","SARS-CoV-2","CTTACATCTCCGCGAA",9,60.73,9.48,-1.36,0.12,2.05,1.07,0.01,">1 nonsynonymous","S41V V71A",2
"lib2","SARS-CoV-2","CTTACATTTAATGGGA",3,7.64,9.81,-1.02,0.29,2.21,1.16,0.03,">1 nonsynonymous","G83H P96T",2
"lib2","SARS-CoV-2","CTTACCAACACATTAA",1,10.16,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40I E141A V180A",3
"lib2","SARS-CoV-2","CTTACCAATCCAATAA",12,7.89,NA,NA,NA,NA,NA,NA,"stop","G86* Y123E G155A H189Y",4
"lib2","SARS-CoV-2","CTTACCACAGAAAACC",6,2.21,NA,NA,NA,NA,NA,NA,"stop","K26* L60F Q144* G172C",4
"lib2","SARS-CoV-2","CTTACCAGGACCACTT",3,17.84,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","S19L R179T P197L",3
"lib2","SARS-CoV-2","CTTACCATCGATAGCG",1,33.38,9.79,-1.05,0.11,2.43,1.11,0,">1 nonsynonymous","N1S A33F V77Y",3
"lib2","SARS-CoV-2","CTTACCATGGACATTA",9,96.89,10.18,-0.66,0.06,2.77,1.03,0,">1 nonsynonymous","V37L L57C",2
"lib2","SARS-CoV-2","CTTACCATTACGACAA",3,28.43,8.65,-2.18,0.1,2.93,1.12,0,">1 nonsynonymous","T63M K128A Q168L",3
"lib2","SARS-CoV-2","CTTACCATTGACTGAC",1,32.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44W G74D P169L",3
"lib2","SARS-CoV-2","CTTACCATTTACAGAT",2,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90A T148N T170K",3
"lib2","SARS-CoV-2","CTTACCCAAAATACCT",9,82.79,10.85,0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTACCCAGCGTTCCA",5,142.26,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","CTTACCCCATATAAAT",4,24.71,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S19Q V37I L95Y",3
"lib2","SARS-CoV-2","CTTACCCTAAACACAT",3,158.27,10.33,-0.51,0.03,2.94,1.02,0,">1 nonsynonymous","P7F K56S",2
"lib2","SARS-CoV-2","CTTACCCTATATCCTC",2,45.86,10.61,-0.22,0.04,2.96,1.02,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","CTTACCGACCCCAAAC",7,35.16,7.89,-2.95,0.2,1.5,1.07,0.01,">1 nonsynonymous","L5Q A105L Y119T Q168S",4
"lib2","SARS-CoV-2","CTTACCGTAAGTTCAC",4,55.39,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D97E V103L Y143F G152L",4
"lib2","SARS-CoV-2","CTTACCGTACAGCACC",18,341.36,10.8,-0.04,0.03,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTACCGTTCCAACCT",8,103.97,10.37,-0.47,0.05,2.81,1.18,0,">1 nonsynonymous","C61V K87V",2
"lib2","SARS-CoV-2","CTTACCTAACCTCAAT",3,28.24,9.46,-1.37,0.2,1.5,1.11,0.02,">1 nonsynonymous","S45F E135V",2
"lib2","SARS-CoV-2","CTTACCTACTATCAAG",4,15.36,10.33,-0.51,0.06,2.98,1.05,0,">1 nonsynonymous","G174L T201Y",2
"lib2","SARS-CoV-2","CTTACCTAGCTTCAAC",9,25.93,9.26,-1.58,0.21,1.6,1.12,0.02,">1 nonsynonymous","F12L L95C",2
"lib2","SARS-CoV-2","CTTACCTCCGGTGTGA",1,79.56,10.89,0.05,0.04,2.96,1.05,0,">1 nonsynonymous","P7N K199S",2
"lib2","SARS-CoV-2","CTTACCTTTTAACTCT",1,48.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10C A18P C158W Q176S",4
"lib2","SARS-CoV-2","CTTACGAAAAATTGCT",5,16.13,9.61,-1.23,0.15,2.27,1.04,0.02,">1 nonsynonymous","L111V D137S",2
"lib2","SARS-CoV-2","CTTACGAAATTAGCGA",19,8.09,NA,NA,NA,NA,NA,NA,"stop","L95P R136I C150Q V173L K198*",5
"lib2","SARS-CoV-2","CTTACGAAGTCACATC",3,86.17,9.89,-0.94,0.06,2.86,1.09,0,">1 nonsynonymous","V103I T140L F156R",3
"lib2","SARS-CoV-2","CTTACGAAGTTTTGAT",1,10.46,9.49,-1.34,0.32,1.76,1.11,0.02,">1 nonsynonymous","V37I A105Q",2
"lib2","SARS-CoV-2","CTTACGAATTTACCGA",2,0.9,NA,NA,NA,NA,NA,NA,"stop","C6* S36Q Q144L",3
"lib2","SARS-CoV-2","CTTACGAATTTAGACG",15,0.35,NA,NA,NA,NA,NA,NA,"stop","K48D S53* T201K",3
"lib2","SARS-CoV-2","CTTACGACGCCCTATC",4,24.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y D112A G155C",3
"lib2","SARS-CoV-2","CTTACGATAGGGAACG",3,57.43,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4V A145S G172Q",3
"lib2","SARS-CoV-2","CTTACGCACCACCACG",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D A22Q K94A D137S",4
"lib2","SARS-CoV-2","CTTACGCGGCGACCAT",6,102.47,10.12,-0.72,0.05,2.82,1.06,0,">1 nonsynonymous","N4Y N151P",2
"lib2","SARS-CoV-2","CTTACGCTTCGAGGCC",3,28.57,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","I88V Y93S S129N",3
"lib2","SARS-CoV-2","CTTACGCTTTCTTTGT",5,128.08,9.53,-1.31,0.04,2.9,1.08,0,">1 nonsynonymous","Y119S S129D",2
"lib2","SARS-CoV-2","CTTACGGTACCCTGGA",2,79.12,9.97,-0.87,0.06,2.44,1.02,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","CTTACGGTGTATCACA",4,108.56,10.31,-0.53,0.07,2.54,1.03,0,">1 nonsynonymous","N24Q F62R N107P Y123F",4
"lib2","SARS-CoV-2","CTTACGTAAACACCAT",6,76.52,6,-4.84,1.36,1.5,1.14,0.01,">1 nonsynonymous","D97V C158G",2
"lib2","SARS-CoV-2","CTTACGTCACTAGTAT",1,7.66,9.42,-1.42,0.02,3,1,0,">1 nonsynonymous","N107Q V115Q",2
"lib2","SARS-CoV-2","CTTACTAATCGAATAG",1,6.13,8.93,-1.9,0.28,1.5,1.18,0.02,">1 nonsynonymous","F12S Q144K",2
"lib2","SARS-CoV-2","CTTACTAATTACAAAA",2,31.99,10.4,-0.44,0.05,2.87,1.09,0,">1 nonsynonymous","G9K K26S",2
"lib2","SARS-CoV-2","CTTACTACCCGACAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","S41* T46I F47R N157* Q168F T201N",6
"lib2","SARS-CoV-2","CTTACTAGAGACGACT",1,11.99,10.24,-0.59,0.04,2.89,1,0,"1 nonsynonymous","S45R",1
"lib2","SARS-CoV-2","CTTACTAGGGGACTTC",8,80.16,10.08,-0.75,0.05,2.87,1.07,0,">1 nonsynonymous","R73S S147T",2
"lib2","SARS-CoV-2","CTTACTCACTGACACG",5,134.6,10.28,-0.55,0.06,2.37,1.02,0,">1 nonsynonymous","V77Q N109K",2
"lib2","SARS-CoV-2","CTTACTCCCGATAATG",10,74.22,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","D97N R127Q Y143V",3
"lib2","SARS-CoV-2","CTTACTGACCACTCTA",4,53.63,8.68,-2.16,0.13,1.95,1.14,0.01,">1 nonsynonymous","S43L D112V I138D",3
"lib2","SARS-CoV-2","CTTACTGATTACCAGC",2,99.75,10.7,-0.14,0.05,2.92,1.09,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","CTTACTGCTTACACAG",2,21.31,10.78,-0.06,0.08,2.85,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTACTGTACTCAAGT",2,41.49,9.95,-0.89,0.08,2.35,1.05,0,">1 nonsynonymous","T3P A67Y",2
"lib2","SARS-CoV-2","CTTACTGTATCTCGGG",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M V52A L60E N120Q L188S",5
"lib2","SARS-CoV-2","CTTACTTAAAAAGAGT",4,30.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6A A14N D112N",3
"lib2","SARS-CoV-2","CTTACTTAAACTTGAA",4,63.03,10.22,-0.62,0.07,2.69,1,0,">1 nonsynonymous","S41R S139H C195V",3
"lib2","SARS-CoV-2","CTTACTTCAAATTTTT",2,76.2,10.18,-0.66,0.06,2.82,1.02,0,">1 nonsynonymous","N107A K132E",2
"lib2","SARS-CoV-2","CTTACTTGGAAAACGC",11,107.12,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G86V Q168D",2
"lib2","SARS-CoV-2","CTTACTTGGGACTCAA",5,27.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N1K L57T V65D S139K",4
"lib2","SARS-CoV-2","CTTAGAAAACCTGGGC",3,30.25,10.74,-0.1,0.09,2.87,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTAGAAACAAACGTA",2,66.02,10.42,-0.42,0.04,2.99,1.02,0,"1 nonsynonymous","E154D",1
"lib2","SARS-CoV-2","CTTAGAAACTGTAACT",4,50.8,10.72,-0.12,0.05,2.88,1.08,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","CTTAGAAAGATAATGA",4,147.94,10.41,-0.42,0.03,2.92,1.04,0,">1 nonsynonymous","K26N A190R",2
"lib2","SARS-CoV-2","CTTAGAAAGGCGTGTG",1,14.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5G I72H S139V",3
"lib2","SARS-CoV-2","CTTAGAAATCTCACGT",1,14.86,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","C61M R124S",2
"lib2","SARS-CoV-2","CTTAGAAATGTACTGA",7,137.85,10.74,-0.09,0.03,2.96,1.05,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","CTTAGAAATTTTACCA",5,0,NA,NA,NA,NA,NA,NA,"stop","N13H V37Q P133T E141D G174V K199*",6
"lib2","SARS-CoV-2","CTTAGAACAAGTATTT",6,15.14,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","N1D N4M F8Y S41L D112L A145I G172I L183Q",8
"lib2","SARS-CoV-2","CTTAGAACTACCTTTA",6,31.4,10.95,0.11,0.08,2.98,1.03,0,">1 nonsynonymous","S164M V173I",2
"lib2","SARS-CoV-2","CTTAGAAGAACTAGTT",2,38.75,10.74,-0.1,0.07,2.82,1.2,0,"1 nonsynonymous","V153M",1
"lib2","SARS-CoV-2","CTTAGAAGTACTACTA",7,96.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107L Y159R",2
"lib2","SARS-CoV-2","CTTAGAAGTGACCATA",4,31.65,11.15,0.31,0.06,3,1.02,0,"1 nonsynonymous","Q168H",1
"lib2","SARS-CoV-2","CTTAGAATCGGCCTAC",10,52.86,10.56,-0.28,0.04,2.92,1.1,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","CTTAGAATGACTTAAC",2,1.05,NA,NA,NA,NA,NA,NA,"stop","N1* K94D G174W L187H",4
"lib2","SARS-CoV-2","CTTAGAATGACTTGGA",8,163.09,10.92,0.09,0.05,2.97,1.04,0,">1 nonsynonymous","L5T I142V S147P",3
"lib2","SARS-CoV-2","CTTAGACAGTCAATAT",6,44.21,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26G P82S",2
"lib2","SARS-CoV-2","CTTAGACCGTTGTTTG",8,1.17,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib2","SARS-CoV-2","CTTAGACGCAGAGAAT",1,23.48,10.66,-0.18,0.06,2.96,1.03,0,">1 nonsynonymous","R27I V37R P149L",3
"lib2","SARS-CoV-2","CTTAGAGAACGTCCAT",5,20.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P96S G101D N130I S147T",4
"lib2","SARS-CoV-2","CTTAGAGACCGCTTAA",1,30.86,8.73,-2.11,0.11,2.96,1.13,0,">1 nonsynonymous","C61L Y119N G174K",3
"lib2","SARS-CoV-2","CTTAGAGCACAACTCT",3,8.78,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4Q A18E F47D R179K",4
"lib2","SARS-CoV-2","CTTAGAGCCCACGGGA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","F8P D97K A105V G116* G146M N157T T201F",7
"lib2","SARS-CoV-2","CTTAGAGCCTTTTTTG",4,124.17,7.09,-3.75,0.15,1.74,1.12,0,"1 nonsynonymous","C150T",1
"lib2","SARS-CoV-2","CTTAGAGCTACCAACC",9,208.09,9.75,-1.09,0.05,2.11,1.04,0,">1 nonsynonymous","G9I Y39W F44S K128L",4
"lib2","SARS-CoV-2","CTTAGAGGTTGTTAGC",1,18.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16V K94T",2
"lib2","SARS-CoV-2","CTTAGATAAAGTAAAG",4,0.93,NA,NA,NA,NA,NA,NA,"stop","S45D C61* K128T",3
"lib2","SARS-CoV-2","CTTAGATAATGTCCAT",4,101.56,10.66,-0.18,0.03,2.95,1.05,0,">1 nonsynonymous","K128G G174N",2
"lib2","SARS-CoV-2","CTTAGATACATTCATG",2,28.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I104N S147C L187T",3
"lib2","SARS-CoV-2","CTTAGATAGTTGGAAA",4,84.09,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10A G172W",2
"lib2","SARS-CoV-2","CTTAGATATGATTTAG",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I V52L K94V E154H F167N",5
"lib2","SARS-CoV-2","CTTAGATCCCCAAAAT",8,39.05,6.26,-4.58,0.71,1.5,1.18,0.02,">1 nonsynonymous","T140K V180S",2
"lib2","SARS-CoV-2","CTTAGATCCTCATATA",5,0.52,NA,NA,NA,NA,NA,NA,"stop","A105V N109A G117*",3
"lib2","SARS-CoV-2","CTTAGATTCACACAGC",9,101.49,10.78,-0.05,0.06,2.92,1.1,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","CTTAGCAAGATATCAA",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W V20R C49W",3
"lib2","SARS-CoV-2","CTTAGCACTTGCACTA",6,131.81,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A18W Y35R N107V T148W R179G",5
"lib2","SARS-CoV-2","CTTAGCCAATGGTAAA",5,107.21,9.65,-1.18,0.09,2.18,1.05,0,">1 nonsynonymous","A105M G152A",2
"lib2","SARS-CoV-2","CTTAGCCCGGGTAAGC",4,27.77,10.5,-0.33,0.05,2.81,1.18,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","CTTAGCGAGAAAGAAT",2,22.6,10.83,-0.01,0.07,2.88,1.11,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CTTAGCGCAGATATAA",27,365.59,10.68,-0.16,0.04,2.95,1.04,0,">1 nonsynonymous","L5E S41V S129R",3
"lib2","SARS-CoV-2","CTTAGCGCATTTACTT",1,36.1,8.93,-1.9,0.18,1.65,1.1,0.02,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","CTTAGCGCCATAAAAT",6,30.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F44Y V77Y W106M R136N",4
"lib2","SARS-CoV-2","CTTAGCGGAGTCATAT",5,23.53,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L5S E76P K87N D97V I142W T148E",6
"lib2","SARS-CoV-2","CTTAGCTAAAGGACTT",11,250.1,10.28,-0.56,0.03,2.93,1.06,0,">1 nonsynonymous","C6T T55D A190V",3
"lib2","SARS-CoV-2","CTTAGCTAACAACTAT",4,55.49,10.49,-0.35,0.07,2.92,1.02,0,">1 nonsynonymous","T63L A105S",2
"lib2","SARS-CoV-2","CTTAGCTGGGAAAAAG",4,24.7,6.18,-4.65,0.8,1.5,1.14,0.02,">1 nonsynonymous","Y121G K132C Q144W",3
"lib2","SARS-CoV-2","CTTAGGACAACTCTGT",3,94.23,9.44,-1.39,0.05,2.85,1.09,0,">1 nonsynonymous","K56F F126W",2
"lib2","SARS-CoV-2","CTTAGGAGACCGCTTT",18,161.64,10.58,-0.26,0.03,2.93,1.06,0,"1 nonsynonymous","A89P",1
"lib2","SARS-CoV-2","CTTAGGCAAATAAACG",3,37.64,6,-4.84,1.61,1.5,1.1,0.02,"1 nonsynonymous","I80E",1
"lib2","SARS-CoV-2","CTTAGGCGCAGATCAA",4,0.8,NA,NA,NA,NA,NA,NA,"stop","F44Q F134R T201*",3
"lib2","SARS-CoV-2","CTTAGGCTACAATGGA",5,102.88,9.86,-0.97,0.08,2.21,1.02,0,">1 nonsynonymous","E10L L95T P197M",3
"lib2","SARS-CoV-2","CTTAGGCTCAATAATA",14,149.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40H W106V N120L K199Q",4
"lib2","SARS-CoV-2","CTTAGGGCAATACCAA",6,44.41,9.44,-1.4,0.04,1.92,1.01,0,">1 nonsynonymous","F12G P149S",2
"lib2","SARS-CoV-2","CTTAGGGGTCGTCACA",2,96.42,10.21,-0.63,0.03,2.85,1.02,0,">1 nonsynonymous","P7Q Y35M S139F T201L",4
"lib2","SARS-CoV-2","CTTAGGTACACAAAAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N4V C31T Q84* D90T",4
"lib2","SARS-CoV-2","CTTAGGTCAAACCTAA",4,120.78,10.92,0.09,0.05,2.92,1.09,0,">1 nonsynonymous","L122S T201R",2
"lib2","SARS-CoV-2","CTTAGGTCATTTATAA",8,296.77,8.3,-2.54,0.09,2.08,1.07,0,">1 nonsynonymous","A33W Y66V Q176W",3
"lib2","SARS-CoV-2","CTTAGTAACAATAGAT",5,66.89,10.86,0.02,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTAGTAATCTAATAT",4,23.67,6.26,-4.58,0.38,1.5,1.09,0.01,">1 nonsynonymous","S19K D97N I142R",3
"lib2","SARS-CoV-2","CTTAGTAATTTCGGTA",2,28.13,10.76,-0.08,0.08,2.85,1.17,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","CTTAGTACCACAAATG",2,11.3,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F8P Y35R F167W",3
"lib2","SARS-CoV-2","CTTAGTCACGATCTAC",18,176.7,10.67,-0.16,0.04,2.94,1.08,0,"1 nonsynonymous","L60G",1
"lib2","SARS-CoV-2","CTTAGTCCTCTCTCCT",5,46.36,6,-4.84,1.23,1.5,1.1,0.01,">1 nonsynonymous","N4Y F70S G83C A89N Q168F",5
"lib2","SARS-CoV-2","CTTAGTCGTAAATCGA",6,156.76,10.59,-0.24,0.03,2.94,1.04,0,">1 nonsynonymous","I88V K132H",2
"lib2","SARS-CoV-2","CTTAGTCTAGCCTGAA",10,72.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50D I88L Y93N E135V",4
"lib2","SARS-CoV-2","CTTAGTTATACGTAAT",3,65.44,8.78,-2.06,0.11,1.83,1.05,0,">1 nonsynonymous","G83C Y165I",2
"lib2","SARS-CoV-2","CTTAGTTATATCTCCC",6,86.28,10.02,-0.81,0.07,2.44,1.03,0,">1 nonsynonymous","Y123W L162M",2
"lib2","SARS-CoV-2","CTTAGTTCCAGGAACC",18,74.4,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","R16M E76S K94V",3
"lib2","SARS-CoV-2","CTTAGTTTAACATCCG",3,50.73,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51I S113N",2
"lib2","SARS-CoV-2","CTTAGTTTTATGTCTT",8,122.99,10.87,0.04,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATAAAAAAAGACC",3,12.2,8.64,-2.2,0.32,1.5,1.16,0.06,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","CTTATAAAAAATCTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* C6A D97S T100S L122E Q144H",6
"lib2","SARS-CoV-2","CTTATAAAAACTCATA",21,282.58,10.15,-0.69,0.05,2.6,1.03,0,"1 nonsynonymous","F47K",1
"lib2","SARS-CoV-2","CTTATAAAATCAAGAA",1,31.39,7.35,-3.49,0.32,1.5,1.15,0.03,">1 nonsynonymous","L60T Q176I",2
"lib2","SARS-CoV-2","CTTATAAACAAGTAGA",2,43.06,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S19L K87S D98A",3
"lib2","SARS-CoV-2","CTTATAAACCCACAAA",8,80.44,10.91,0.08,0.05,2.95,1.05,0,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","CTTATAAACTACATTT",14,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y F44N A81M",3
"lib2","SARS-CoV-2","CTTATAAAGAAGGGTA",3,36.75,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F44T V103A S129T Q144A P177T T201R",6
"lib2","SARS-CoV-2","CTTATAAATAGAGGAA",5,11.46,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S53F L131R G155T",3
"lib2","SARS-CoV-2","CTTATAACCAAGACTA",4,7.61,NA,NA,NA,NA,NA,NA,"stop","C31W Y175*",2
"lib2","SARS-CoV-2","CTTATAAGAAGAGGGT",12,245.12,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A67S L125K G174K",3
"lib2","SARS-CoV-2","CTTATAAGAAGATTCA",13,49.57,8.44,-2.4,0.17,1.65,1.12,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","CTTATAAGCAACGCAT",2,39.66,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K48S Y159S T201Y",3
"lib2","SARS-CoV-2","CTTATAATAGAAGATA",1,41.41,6,-4.84,0.4,2.73,1.05,0,">1 nonsynonymous","T55S I104L R127D E141G S147F",5
"lib2","SARS-CoV-2","CTTATAATCTTGAGTG",5,47.36,9.22,-1.61,0.06,2.01,1.07,0,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","CTTATAATTGACTAGG",15,350.47,9.35,-1.49,0.04,2.89,1.12,0,"1 nonsynonymous","F126Y",1
"lib2","SARS-CoV-2","CTTATACACCAACGGA",4,75.39,10.54,-0.3,0.1,2.78,1.15,0,">1 nonsynonymous","T3F R27K",2
"lib2","SARS-CoV-2","CTTATACATAGCTGTC",2,13.71,6,-4.84,2,3,1.02,0,">1 nonsynonymous","W23L F47S G51Y",3
"lib2","SARS-CoV-2","CTTATACCCAAAAACA",4,32.35,10.86,0.03,0.09,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATACGCTCTTGAC",7,157.52,10.02,-0.81,0.07,2.39,1,0,">1 nonsynonymous","Q84W K199R",2
"lib2","SARS-CoV-2","CTTATACGGCTGGATT",4,74.2,10.73,-0.11,0.03,2.91,1.08,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CTTATACTGATTTTAC",2,15.4,6.44,-4.39,0.46,1.79,1.13,0.01,">1 nonsynonymous","C6V I80T F126W",3
"lib2","SARS-CoV-2","CTTATACTGGGTATTC",2,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G K87M V103S",3
"lib2","SARS-CoV-2","CTTATAGACAATAAAA",4,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D G83V D98V F167V",4
"lib2","SARS-CoV-2","CTTATAGAGTAAGAAA",4,9.39,8.54,-2.3,0.38,1.5,1.17,0.04,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","CTTATAGCAAAGCAGC",8,39.18,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F17V R27I G101F",3
"lib2","SARS-CoV-2","CTTATAGCCCTAAATT",2,17.99,6.39,-4.45,0.31,2.59,1.14,0.01,">1 nonsynonymous","K48S N92S A105V",3
"lib2","SARS-CoV-2","CTTATAGCCTCACGCG",9,152.28,10.34,-0.49,0.03,2.89,1.07,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","CTTATAGGCCTTAATG",9,66.09,10.75,-0.09,0.03,2.99,1.03,0,"1 nonsynonymous","I138D",1
"lib2","SARS-CoV-2","CTTATAGTCAAAGACA",9,404.19,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S36W A81C S164F Y178S",4
"lib2","SARS-CoV-2","CTTATATAAACAAATA",2,34.94,9.81,-1.02,0.06,2.69,1.05,0,">1 nonsynonymous","I28L Y91S",2
"lib2","SARS-CoV-2","CTTATATAATAAAAGC",5,15.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5M N13C R73P",3
"lib2","SARS-CoV-2","CTTATATAGGAGTAAG",8,44.96,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y93I L162W",2
"lib2","SARS-CoV-2","CTTATATCAAACACCA",5,102.56,9.24,-1.6,0.07,2.37,1.06,0,">1 nonsynonymous","R25T K87S",2
"lib2","SARS-CoV-2","CTTATATCCGAATTTA",1,110.1,10.19,-0.65,0.04,2.88,1,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","CTTATATCCTGCTAAG",7,149.26,10.86,0.02,0.05,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTATATCGTTCGTTA",1,27.45,9.69,-1.15,0.13,2.49,1.05,0.01,">1 nonsynonymous","V37Y N120V I138W F160N",4
"lib2","SARS-CoV-2","CTTATATGAATTGAGT",9,50.9,10.71,-0.13,0.06,2.95,1.08,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","CTTATATGCTATTCAA",4,64.5,10.81,-0.03,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATATGGATTACAA",11,74.58,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F44D G86R T100F N157D T170C",5
"lib2","SARS-CoV-2","CTTATATTCTGCACCT",3,22.33,9.61,-1.23,0.12,1.75,1.02,0.01,">1 nonsynonymous","F8G A33S G83Q",3
"lib2","SARS-CoV-2","CTTATCACCAGAATCC",4,7.31,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","L38S K56N D98S G116H S129A S164L",6
"lib2","SARS-CoV-2","CTTATCATCCGACCTA",9,63.26,6,-4.84,1.95,1.5,1.16,0.01,">1 nonsynonymous","L95M N107S Y121S",3
"lib2","SARS-CoV-2","CTTATCATGGTCATGC",4,50.13,10.3,-0.54,0.06,2.8,1.07,0,"1 nonsynonymous","A33K",1
"lib2","SARS-CoV-2","CTTATCCAAAACACAT",1,28.61,8.22,-2.61,0.15,2.61,1.26,0.01,">1 nonsynonymous","S29E K87V D90C E154Y",4
"lib2","SARS-CoV-2","CTTATCCATATTAACG",1,0,NA,NA,NA,NA,NA,NA,"stop","F44V I88S I104R Y121*",4
"lib2","SARS-CoV-2","CTTATCCCATAGAAAA",1,45.36,10.21,-0.62,0.11,2.72,1.06,0,">1 nonsynonymous","N30T T100R",2
"lib2","SARS-CoV-2","CTTATCCCATAGATTC",1,1.95,NA,NA,NA,NA,NA,NA,"stop","Y21C C61* E141G",3
"lib2","SARS-CoV-2","CTTATCCCCGTACAGG",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N C49Y V103A",3
"lib2","SARS-CoV-2","CTTATCCCGGTTCCGG",9,85.56,10.9,0.06,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATCCCTCGTATAC",3,78.03,9.51,-1.33,0.07,1.84,1.04,0,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","CTTATCCGACCGTTCA",9,83.5,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L95K S113D",2
"lib2","SARS-CoV-2","CTTATCCGATGATGGA",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116F S129D",2
"lib2","SARS-CoV-2","CTTATCCTATAATTCA",1,78.73,6.13,-4.71,0.61,1.5,1.12,0.01,">1 nonsynonymous","L38M A81V G117D",3
"lib2","SARS-CoV-2","CTTATCCTCATAGGAA",4,35.2,10.87,0.04,0.09,2.89,1.13,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","CTTATCCTGAAACACG",4,10.26,NA,NA,NA,NA,NA,NA,"stop","V11L S45* N92W",3
"lib2","SARS-CoV-2","CTTATCCTTTTGATCT",5,82.5,9.78,-1.06,0.11,2.16,1.03,0.01,">1 nonsynonymous","E10G V173S",2
"lib2","SARS-CoV-2","CTTATCGCAACACGCT",4,12.16,10.82,-0.01,0.38,1.5,1,0.07,">1 nonsynonymous","D34I K56W S139A P149A",4
"lib2","SARS-CoV-2","CTTATCGCAAGTATGA",1,71.26,9.54,-1.29,0.05,2.86,1.11,0,"1 nonsynonymous","Y119Q",1
"lib2","SARS-CoV-2","CTTATCTAATTGGAAT",4,51.34,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86C G117R",2
"lib2","SARS-CoV-2","CTTATCTACTCGCGGC",4,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R N92I",2
"lib2","SARS-CoV-2","CTTATCTAGAAGCTGT",14,244.22,9.98,-0.85,0.07,2.43,1.05,0,">1 nonsynonymous","N64K I80L K128G T201V",4
"lib2","SARS-CoV-2","CTTATCTGATCAAGAT",1,5.43,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","V65Y T140R C150I C195L",4
"lib2","SARS-CoV-2","CTTATCTTCAACTGTT",9,68.12,9.41,-1.43,0.05,1.97,1.02,0,">1 nonsynonymous","F8S A14R",2
"lib2","SARS-CoV-2","CTTATGAAAAAATTCG",4,44.96,6,-4.84,1.29,3,1.14,0,">1 nonsynonymous","L5H Y21K V37L F156Q",4
"lib2","SARS-CoV-2","CTTATGAAAACAGCGG",1,23.84,10.14,-0.7,0.1,2.4,1.01,0.01,">1 nonsynonymous","N1R T15N T63Y",3
"lib2","SARS-CoV-2","CTTATGAAATGCTAGA",6,60.47,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N4T V77A L95Q Y165C",4
"lib2","SARS-CoV-2","CTTATGAACGGCGAAA",9,89.6,10.93,0.09,0.08,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATGAATTGGTTTA",1,0.04,NA,NA,NA,NA,NA,NA,"stop","N110*",1
"lib2","SARS-CoV-2","CTTATGACATGAATTT",2,13.34,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P54S V103F",2
"lib2","SARS-CoV-2","CTTATGACCAAGTAAA",10,67.46,10.81,-0.02,0.03,2.96,1.07,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","CTTATGACTTCCATAT",8,151.74,10.67,-0.16,0.03,2.97,1.05,0,">1 nonsynonymous","Y35M G174N T201L",3
"lib2","SARS-CoV-2","CTTATGAGATAACAAA",4,16.43,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","N92L G166S A190L",3
"lib2","SARS-CoV-2","CTTATGAGATGTTACA",4,82.99,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D34V E141W Y175N",3
"lib2","SARS-CoV-2","CTTATGAGTGCCTTAA",2,50.4,10.57,-0.27,0.05,3,1,0,">1 nonsynonymous","N4S T15R",2
"lib2","SARS-CoV-2","CTTATGATAATTGATT",1,11.45,9.42,-1.42,0.16,2.07,1.14,0.01,">1 nonsynonymous","W106K P149F",2
"lib2","SARS-CoV-2","CTTATGATACGACAAG",2,5.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103M G117Y",2
"lib2","SARS-CoV-2","CTTATGCGCAAAAAGT",2,24.7,7.24,-3.59,0.42,1.5,1.06,0.06,">1 nonsynonymous","D97L R124Y P133S",3
"lib2","SARS-CoV-2","CTTATGCGGACTCCAT",11,139.6,7.31,-3.53,0.24,1.5,1.12,0.02,">1 nonsynonymous","A14R V52P T85M Y119N",4
"lib2","SARS-CoV-2","CTTATGCTCGATTTCG",4,20.27,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N13Q V37G C61G S113Y L122S T170Y",6
"lib2","SARS-CoV-2","CTTATGCTGTACATGT",2,29.98,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S41K W106T K114Y R136E",4
"lib2","SARS-CoV-2","CTTATGGCTTCAACGT",1,22.14,10.19,-0.64,0.1,2.67,1.11,0,">1 nonsynonymous","F44I L60K",2
"lib2","SARS-CoV-2","CTTATGGGAAGATTAC",9,2.2,NA,NA,NA,NA,NA,NA,"stop","L5R E10* G101Q K132I",4
"lib2","SARS-CoV-2","CTTATGGGTCTTATCA",8,89.3,10.95,0.11,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATGGTAAAGGAAT",5,36.18,6.07,-4.77,0.74,1.5,1.15,0.01,">1 nonsynonymous","C6P D137E",2
"lib2","SARS-CoV-2","CTTATGTTAAGCAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","T55C K87*",2
"lib2","SARS-CoV-2","CTTATGTTCATAAAAA",6,192.52,9.66,-1.18,0.04,2.75,1.09,0,">1 nonsynonymous","T3M K56Y P149L Q168N P197T",5
"lib2","SARS-CoV-2","CTTATTAACAATTAAT",2,50.91,10.66,-0.17,0.06,2.89,1.12,0,">1 nonsynonymous","Y66V E141H",2
"lib2","SARS-CoV-2","CTTATTACAGTCCCAT",6,122.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S108Y L122S L162H",3
"lib2","SARS-CoV-2","CTTATTACCCGTTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N13L V32* K114L P197T",4
"lib2","SARS-CoV-2","CTTATTACTTCAACAT",14,168.31,6,-4.84,1,1.5,1.17,0.01,">1 nonsynonymous","A14S K56N P96S S129R C158Y G166N Q176A",7
"lib2","SARS-CoV-2","CTTATTAGTACACGCT",7,68.11,6,-4.84,2,3,1.21,0,">1 nonsynonymous","A22P L60V V103A",3
"lib2","SARS-CoV-2","CTTATTATCAACGGAA",12,116.81,7.67,-3.16,0.27,1.5,1.07,0.02,">1 nonsynonymous","A14L D137F",2
"lib2","SARS-CoV-2","CTTATTATCACTTGAC",4,52.27,10.89,0.06,0.07,2.89,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATTATCAGGACTT",4,24.23,6.73,-4.11,0.46,1.5,1.02,0.03,">1 nonsynonymous","S41F D59I T85S G101I",4
"lib2","SARS-CoV-2","CTTATTATGAATAAAA",3,26.87,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G86K N107T",2
"lib2","SARS-CoV-2","CTTATTATGCCAATCA",5,109.09,8.73,-2.1,0.07,2.6,1.05,0,">1 nonsynonymous","I2S E76G L125R",3
"lib2","SARS-CoV-2","CTTATTATTGCCAAAA",3,12.49,6,-4.84,0.82,3,1.14,0.02,">1 nonsynonymous","D68Q N92P R127S",3
"lib2","SARS-CoV-2","CTTATTCAGGTTTTTC",3,80.74,9.99,-0.84,0.05,2.81,1.03,0,">1 nonsynonymous","I2Y P7M A89P",3
"lib2","SARS-CoV-2","CTTATTCATACAACAA",5,11.86,7.83,-3.01,0.32,1.94,1.23,0.03,">1 nonsynonymous","A33H Y50N A89C K198M",4
"lib2","SARS-CoV-2","CTTATTCCGGCATTGG",7,77.49,9.96,-0.87,0.04,2.7,1.02,0,">1 nonsynonymous","G83V N120V P197T",3
"lib2","SARS-CoV-2","CTTATTCCGGGATATT",4,19.36,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","V182R",1
"lib2","SARS-CoV-2","CTTATTCCTCGAGGAC",5,77.1,9.62,-1.22,0.08,1.83,1.08,0,">1 nonsynonymous","R16K S41N F185D",3
"lib2","SARS-CoV-2","CTTATTGAAATCAAAC",4,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M N13L A18M C61I T85F",5
"lib2","SARS-CoV-2","CTTATTGAGACAATAT",10,104.51,10.19,-0.65,0.09,2.47,1.03,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","CTTATTGGATAGAAAT",9,173.42,10.83,-0.01,0.04,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATTGTATACGCGC",10,120.75,10.84,0,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTATTGTCCAATTCA",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K P161G",2
"lib2","SARS-CoV-2","CTTATTTATATCGAAT",2,164.4,9.93,-0.91,0.03,2.92,1.05,0,">1 nonsynonymous","F62I I138C I142P",3
"lib2","SARS-CoV-2","CTTATTTCAGACTTCC",1,27.26,9.71,-1.13,0.11,2.22,1.01,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","CTTATTTCTAAAACTA",14,59.42,8.69,-2.14,0.38,1.5,1,0.08,">1 nonsynonymous","T3H F12G G74T R136P P197K",5
"lib2","SARS-CoV-2","CTTATTTGTAGTTGCT",7,1.67,NA,NA,NA,NA,NA,NA,"stop","V37N E76* K94F L131C",4
"lib2","SARS-CoV-2","CTTATTTTAAAAATAC",6,34.53,9.21,-1.63,0.17,2.71,1.17,0.01,">1 nonsynonymous","Y35T A42R P54S F156E",4
"lib2","SARS-CoV-2","CTTATTTTTAACTCAT",7,88.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4K N40C Y50L D68G Q144N N157T",6
"lib2","SARS-CoV-2","CTTATTTTTTAGCAAA",11,241.88,8.94,-1.9,0.1,1.5,1.07,0,">1 nonsynonymous","Y39T V180F",2
"lib2","SARS-CoV-2","CTTCAAAAAACAGTGT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T R73G",2
"lib2","SARS-CoV-2","CTTCAAAACCGAGTTG",8,87.59,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","R179W",1
"lib2","SARS-CoV-2","CTTCAAAAGATAAACC",3,27.09,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","L95K",1
"lib2","SARS-CoV-2","CTTCAAAATAACTATA",8,18.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96M Q144D Q168Y",3
"lib2","SARS-CoV-2","CTTCAAACCGGCCACA",3,11.31,11.03,0.2,0.11,2.83,1.12,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTTCAAACCTTGATTA",5,18.66,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","T3V A105T N118S L131A S164P",5
"lib2","SARS-CoV-2","CTTCAAAGCTTTAAAA",3,12.24,10.85,0.01,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCAAAGGACAATCA",3,69.29,8.38,-2.46,0.16,1.85,1.08,0.01,">1 nonsynonymous","G83R D90V Y119A",3
"lib2","SARS-CoV-2","CTTCAACATGCAGCCA",1,25.94,10.25,-0.59,0.06,2.89,1,0,">1 nonsynonymous","D34V L60F S129R",3
"lib2","SARS-CoV-2","CTTCAACCAATAACAT",11,369.63,6,-4.84,1.05,1.5,1.21,0.01,">1 nonsynonymous","V37R G51R N120Q S139A Q176R",5
"lib2","SARS-CoV-2","CTTCAAGCAAGAGTGT",5,78.98,10.45,-0.38,0.04,2.98,1.03,0,">1 nonsynonymous","A33V C61F D98A",3
"lib2","SARS-CoV-2","CTTCAAGCACTATAGG",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P T63H G86R T100L",4
"lib2","SARS-CoV-2","CTTCAAGGACTGGGTC",13,195.83,10.6,-0.24,0.03,2.96,1.05,0,">1 nonsynonymous","I2R P149I G196A",3
"lib2","SARS-CoV-2","CTTCAAGGTTATCAGA",10,4.67,NA,NA,NA,NA,NA,NA,"stop","S29* D59N",2
"lib2","SARS-CoV-2","CTTCAATATCTTCGAG",6,31.06,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T15C S69T L95H N120L",4
"lib2","SARS-CoV-2","CTTCAATCCCAAACTT",3,114.91,10.86,0.03,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCAATTAACTACTG",9,19.3,6.27,-4.56,0.96,1.5,1.15,0.05,">1 nonsynonymous","N13R N64L G86L N107K F185I A192P",6
"lib2","SARS-CoV-2","CTTCACAATCAAGTTT",6,84.5,9.7,-1.14,0.05,2.96,1,0,">1 nonsynonymous","R78W N120K G174T",3
"lib2","SARS-CoV-2","CTTCACACAAAACTAG",6,51.48,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","S36V N58C N107Y F185K",4
"lib2","SARS-CoV-2","CTTCACAGGGGAAATA",7,72.84,9.83,-1.01,0.08,2.08,1.03,0,">1 nonsynonymous","F47N N130L",2
"lib2","SARS-CoV-2","CTTCACATTTATGACA",1,14.24,10.66,-0.18,0.09,2.78,1.2,0,"1 nonsynonymous","E141H",1
"lib2","SARS-CoV-2","CTTCACATTTCCAGCT",1,12.65,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","V32E L38R F44L A67D Y121C K128I",6
"lib2","SARS-CoV-2","CTTCACCCAACGTAGG",4,0.8,NA,NA,NA,NA,NA,NA,"stop","I2Y C31R S41* F44L N64L A89R V103C",7
"lib2","SARS-CoV-2","CTTCACCCTAACGAAC",1,32.46,10.75,-0.08,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCACCCTACTGATA",5,77.38,9.19,-1.64,0.04,2.92,1.07,0,">1 nonsynonymous","V37R N157S T201R",3
"lib2","SARS-CoV-2","CTTCACCCTTGTCCAA",4,22.5,10.87,0.03,0.05,2.99,1.02,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","CTTCACCTCTGCCTGT",17,159.81,6,-4.84,1.11,1.5,1.15,0.01,">1 nonsynonymous","G101L Y178V",2
"lib2","SARS-CoV-2","CTTCACCTGACAGAAA",4,23.33,6.95,-3.89,0.39,1.5,1.11,0.05,">1 nonsynonymous","D59Y Q84N Y143E",3
"lib2","SARS-CoV-2","CTTCACGAAAATACCC",7,66.59,8.91,-1.92,0.15,1.85,1.12,0.01,">1 nonsynonymous","F17I A42W D59R T201C",4
"lib2","SARS-CoV-2","CTTCACGAGAAAACTA",25,193.45,6,-4.84,1.96,1.5,1.15,0.01,">1 nonsynonymous","Y21H S29M D68F",3
"lib2","SARS-CoV-2","CTTCACGCTCGAGAAA",9,113.34,10.84,0.01,0.03,3,1.02,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","CTTCACGTAAAACGGT",4,30.73,8.2,-2.64,0.27,1.55,1.09,0.04,">1 nonsynonymous","K94P K114A L187S",3
"lib2","SARS-CoV-2","CTTCACGTGACAAAGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","CTTCACTAAAATACCA",6,1.63,NA,NA,NA,NA,NA,NA,"stop","K56Q S108N E135* V173L",4
"lib2","SARS-CoV-2","CTTCACTATAACATAT",2,28.32,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3S T15P I28S I80R N120A V173S",6
"lib2","SARS-CoV-2","CTTCACTCATACATGG",1,96.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10K V32L Y165G",3
"lib2","SARS-CoV-2","CTTCAGAATAGAAACC",1,21.84,10.85,0.02,0.11,2.93,1.09,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","CTTCAGACATAGTGTC",4,145.18,9.61,-1.22,0.06,2.68,1.03,0,">1 nonsynonymous","S129F S147T E154W K198L",4
"lib2","SARS-CoV-2","CTTCAGACCCCAAGCC",10,172.63,10.86,0.02,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCAGAGGGTAACTT",3,66.95,10.74,-0.09,0.04,2.85,1.11,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","CTTCAGATGAGCGATT",11,38.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9V T15A G51I C150G",4
"lib2","SARS-CoV-2","CTTCAGCGAAAACACC",4,35.32,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","E10R F62C G101S E154N R179D",5
"lib2","SARS-CoV-2","CTTCAGCGTTACTAAC",3,28.45,6.22,-4.62,1.1,1.5,1.23,0.04,">1 nonsynonymous","E10P L57V N64R S139C P169Q K198M",6
"lib2","SARS-CoV-2","CTTCAGCTAGCCATTT",5,69.43,6.66,-4.18,0.27,1.5,1.12,0.01,">1 nonsynonymous","D112S G146A",2
"lib2","SARS-CoV-2","CTTCAGCTATATACGT",2,44.5,9.64,-1.19,0.13,2.27,1.11,0.01,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","CTTCAGGATTATATGA",1,18.71,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5I A14Y V20N V32K T46I E141A L183W",7
"lib2","SARS-CoV-2","CTTCAGTAAAACCATT",3,662.64,10.1,-0.74,0.02,2.97,1.02,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","CTTCAGTTAAGCAGAT",2,25.4,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9R A33R T140I N171R",4
"lib2","SARS-CoV-2","CTTCAGTTCCATAGAA",13,2.06,NA,NA,NA,NA,NA,NA,"stop","I138* S147L C158Q",3
"lib2","SARS-CoV-2","CTTCAGTTCCTGACAT",1,11.2,10.43,-0.41,0.1,2.87,1.1,0.01,">1 nonsynonymous","N13H G146S",2
"lib2","SARS-CoV-2","CTTCATACATCTTCAT",6,60.91,10.79,-0.04,0.04,2.95,1.06,0,">1 nonsynonymous","L60I A190D",2
"lib2","SARS-CoV-2","CTTCATACATGTCTAT",3,34.13,6,-4.84,0.65,1.5,1.06,0.01,">1 nonsynonymous","V52C L122N S129W G172E T201W",5
"lib2","SARS-CoV-2","CTTCATAGAACATTAT",5,120.89,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V37N A81Y T100L R127A Y175T",5
"lib2","SARS-CoV-2","CTTCATAGACTTAACG",4,0.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTTCATAGGTTTTGGG",2,43.33,9.88,-0.95,0.09,2.47,1.16,0,">1 nonsynonymous","A14C F62T P149H",3
"lib2","SARS-CoV-2","CTTCATAGTCCTTTAC",4,47.18,10.05,-0.79,0.1,2.71,1.04,0,">1 nonsynonymous","Y35L S139W",2
"lib2","SARS-CoV-2","CTTCATAGTTATTGAG",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95F G172C",2
"lib2","SARS-CoV-2","CTTCATATCGCTTAAA",2,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65R V77R D97F",3
"lib2","SARS-CoV-2","CTTCATCAAAACATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117Q N171W",2
"lib2","SARS-CoV-2","CTTCATCACAAAAAAT",5,52.87,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D97S Y123D A145Y F160L",4
"lib2","SARS-CoV-2","CTTCATCCTTATTTAC",4,0.84,NA,NA,NA,NA,NA,NA,"stop","L5I S139D T148* L162M",4
"lib2","SARS-CoV-2","CTTCATCTATGACTAA",1,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V R25K",2
"lib2","SARS-CoV-2","CTTCATCTTAGTCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15S S45F P54T T140* G155* G196K",6
"lib2","SARS-CoV-2","CTTCATGACAATAATG",6,60.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D68V L95Q Y119F",3
"lib2","SARS-CoV-2","CTTCATGTTTATTTCT",14,232.1,9.71,-1.13,0.06,2.47,1.06,0,">1 nonsynonymous","C6Y S41P",2
"lib2","SARS-CoV-2","CTTCATTGTCACGCTC",12,36.85,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103L D112H",2
"lib2","SARS-CoV-2","CTTCATTTAAACCGAT",8,141.34,10.06,-0.78,0.03,2.87,1.07,0,">1 nonsynonymous","L95V P169I",2
"lib2","SARS-CoV-2","CTTCATTTACATTATT",2,13.49,8.32,-2.52,0.36,1.5,1,0.07,">1 nonsynonymous","A105G P133L",2
"lib2","SARS-CoV-2","CTTCCAAAAGCAACAT",1,11.45,11.05,0.22,0.08,3,1.02,0,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","CTTCCAAATCAAACAA",7,13.63,6,-4.84,2,2.22,1.2,0.02,">1 nonsynonymous","C61I E141S V180P",3
"lib2","SARS-CoV-2","CTTCCAAATCAATGCA",5,55.27,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V37T C61V N120I C158F",4
"lib2","SARS-CoV-2","CTTCCAACAAGATCTG",11,137.11,10.85,0.02,0.05,2.88,1.13,0,"1 nonsynonymous","V173Q",1
"lib2","SARS-CoV-2","CTTCCAACATCAAGAT",3,0.77,NA,NA,NA,NA,NA,NA,"stop","I72F I80Q F126*",3
"lib2","SARS-CoV-2","CTTCCAAGAACAATGT",2,18.7,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A14N S45V P96W",3
"lib2","SARS-CoV-2","CTTCCAATTCAAATCC",9,21.25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56Y V103N",2
"lib2","SARS-CoV-2","CTTCCACAACACTAAG",2,28.3,10.12,-0.72,0.07,2.73,1.06,0,">1 nonsynonymous","R27V P133T",2
"lib2","SARS-CoV-2","CTTCCACACCTGGTTT",1,67.74,8.36,-2.48,0.09,2.81,1.17,0,">1 nonsynonymous","G9E S45L L125E",3
"lib2","SARS-CoV-2","CTTCCACATATACGTA",2,27.64,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","R25M R127D Y178H",3
"lib2","SARS-CoV-2","CTTCCACCGCCAACAT",9,170.2,10.38,-0.46,0.03,2.91,1.05,0,">1 nonsynonymous","N4D F12V",2
"lib2","SARS-CoV-2","CTTCCACGTAACGGTC",12,220.8,10.8,-0.03,0.04,2.98,1.04,0,"1 nonsynonymous","P54H",1
"lib2","SARS-CoV-2","CTTCCACTAGTACATC",3,84.19,10.38,-0.45,0.04,2.94,1.08,0,">1 nonsynonymous","S36G S43T Q84R Y175F",4
"lib2","SARS-CoV-2","CTTCCAGCATACCTTA",2,12.08,6,-4.84,2,3,1.26,0.03,">1 nonsynonymous","L60V A89S P149I Q176M",4
"lib2","SARS-CoV-2","CTTCCAGGAGATATAC",7,67.17,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","G86D A105P R127I",3
"lib2","SARS-CoV-2","CTTCCAGTTTACGGCC",4,67.48,10.01,-0.83,0.06,2.92,1.1,0,">1 nonsynonymous","N110I G174L",2
"lib2","SARS-CoV-2","CTTCCATAAGGGCCGC",25,5.01,NA,NA,NA,NA,NA,NA,"stop","D98Y N110P I138* Q168R",4
"lib2","SARS-CoV-2","CTTCCATACACTCCAA",3,77.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86Q S108Y",2
"lib2","SARS-CoV-2","CTTCCATATTGTTACG",4,2.09,NA,NA,NA,NA,NA,NA,"stop","A14Y P149*",2
"lib2","SARS-CoV-2","CTTCCATCACTTCCCT",3,109.57,10.23,-0.61,0.05,2.94,1.03,0,">1 nonsynonymous","I2M G9Q A81K",3
"lib2","SARS-CoV-2","CTTCCATTTCAATTAT",2,50.73,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G116A G146Q G166P",3
"lib2","SARS-CoV-2","CTTCCCAAATTCAATG",4,52.18,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6E A14D P96T F99L Q176Y L188Y",6
"lib2","SARS-CoV-2","CTTCCCAATTCTGCCC",4,0.27,NA,NA,NA,NA,NA,NA,"stop","A18Y I28T S45W T85A Y93W D112R N130G D137L C158W G174*",10
"lib2","SARS-CoV-2","CTTCCCAGGGATCTAG",4,108.32,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S19M G74P Q176P C195G",4
"lib2","SARS-CoV-2","CTTCCCCACTACTTCG",8,63.02,10.9,0.06,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCCCCAGCCACTCA",2,64.16,10.81,-0.03,0.05,2.98,1.04,0,"1 nonsynonymous","L187V",1
"lib2","SARS-CoV-2","CTTCCCCATTCAGAAT",1,30.07,8.57,-2.26,0.22,2.74,1.05,0.01,">1 nonsynonymous","N157Y T201S",2
"lib2","SARS-CoV-2","CTTCCCCCCCTTTAAA",3,26.67,9.4,-1.43,0.13,1.91,1.03,0.01,"1 nonsynonymous","R136P",1
"lib2","SARS-CoV-2","CTTCCCCGAACAAGCC",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTTCCCCGATTGCCGC",7,54.24,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61H D112R S164F",3
"lib2","SARS-CoV-2","CTTCCCCTGAACTGGT",5,34.45,7.79,-3.04,0.37,1.5,1.24,0.04,">1 nonsynonymous","V32I V52L G117S E135L",4
"lib2","SARS-CoV-2","CTTCCCCTTTTCACAA",8,160.45,8.6,-2.23,0.08,2.54,1.08,0,">1 nonsynonymous","T3Y L60E V103I Y119D",4
"lib2","SARS-CoV-2","CTTCCCTATATTCACG",19,158.59,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I138G A145Y T170I",3
"lib2","SARS-CoV-2","CTTCCGAAGACCTTCA",17,75.55,7.58,-3.25,0.42,1.5,1.16,0.05,">1 nonsynonymous","S69P Q144L",2
"lib2","SARS-CoV-2","CTTCCGAATTCATATG",4,1.37,NA,NA,NA,NA,NA,NA,"stop","S108I Y159R K198*",3
"lib2","SARS-CoV-2","CTTCCGACATGCCTCC",2,23.18,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","P7D V103D V115G",3
"lib2","SARS-CoV-2","CTTCCGACTATAAAAA",3,23.6,10.24,-0.6,0.06,2.78,1.07,0,">1 nonsynonymous","K56L Y66S",2
"lib2","SARS-CoV-2","CTTCCGATAAAAAATA",12,131.11,10.95,0.11,0.04,2.95,1.05,0,">1 nonsynonymous","I2D L122Q A190V",3
"lib2","SARS-CoV-2","CTTCCGATCCTGTTAT",4,0.49,NA,NA,NA,NA,NA,NA,"stop","L5S D59G N92K D97P N107P Y159A P197*",7
"lib2","SARS-CoV-2","CTTCCGTAACTCCCAA",1,33.43,8.67,-2.16,0.37,1.5,1,0.05,"1 nonsynonymous","G101C",1
"lib2","SARS-CoV-2","CTTCCTAAAACGCCTG",6,1.35,NA,NA,NA,NA,NA,NA,"stop","N13I L57* F62G C150G F185I",5
"lib2","SARS-CoV-2","CTTCCTAAACCCAAAT",5,62.67,10.77,-0.07,0.07,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTCCTAACCTGATTA",12,26.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K56P T85V S113G T170F Q176L",5
"lib2","SARS-CoV-2","CTTCCTACCGAAAGAG",3,38.54,10.14,-0.7,0.08,2.38,1.01,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","CTTCCTAGCTGCGAAA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","L125*",1
"lib2","SARS-CoV-2","CTTCCTATAAATCGAT",3,46.24,6.22,-4.62,0.87,1.5,1.16,0.04,">1 nonsynonymous","P7I N40Y E135H C150A V173H A192V",6
"lib2","SARS-CoV-2","CTTCCTATAGCCTATG",3,41.58,10.84,0.01,0.07,2.8,1.21,0,">1 nonsynonymous","A42M T201L",2
"lib2","SARS-CoV-2","CTTCCTCAAGACAATC",6,74.55,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","K87S D98F R124H Q144H L162F",5
"lib2","SARS-CoV-2","CTTCCTCTTGCCGCAT",4,2.03,NA,NA,NA,NA,NA,NA,"stop","N58S S69* K87S D98V Q144F S164A",6
"lib2","SARS-CoV-2","CTTCCTTAGACAACTA",6,67.17,6.44,-4.4,0.61,1.5,1.23,0.03,">1 nonsynonymous","G9K F99N E141R G152T",4
"lib2","SARS-CoV-2","CTTCCTTATGTCAGGG",1,3.34,NA,NA,NA,NA,NA,NA,"stop","C6T E10* Y93H P149D",4
"lib2","SARS-CoV-2","CTTCCTTCAAAGAATG",5,11.9,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T100D S113W",2
"lib2","SARS-CoV-2","CTTCCTTCGCCAAAGA",2,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S N92T S113L Y119P",4
"lib2","SARS-CoV-2","CTTCCTTGCCCTTCTA",1,48.51,10.61,-0.22,0.1,2.73,1.18,0,">1 nonsynonymous","D98Q N130F",2
"lib2","SARS-CoV-2","CTTCCTTTTGATGTAA",3,129.57,10.17,-0.67,0.05,2.8,1.03,0,">1 nonsynonymous","G9K S43F Q176N K199S",4
"lib2","SARS-CoV-2","CTTCGAACCCGTTCAT",1,17.38,10.83,-0.01,0.1,2.88,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTTCGAACTCTGGTAG",1,21.59,11.08,0.25,0.04,3,1.02,0,">1 nonsynonymous","I138V Q163M",2
"lib2","SARS-CoV-2","CTTCGAAGTCAATACC",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92D F160C",2
"lib2","SARS-CoV-2","CTTCGAATCCTACATT",3,34.03,10.83,0,0.07,3,1.02,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","CTTCGAATGTTTTGAA",2,9.31,9.62,-1.22,0.15,2.09,1,0.01,"1 nonsynonymous","A89M",1
"lib2","SARS-CoV-2","CTTCGACGTGATTAAA",1,17.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11H N40I S200I",3
"lib2","SARS-CoV-2","CTTCGAGACAAACACG",6,40.55,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12Q K56C T63F A105P",4
"lib2","SARS-CoV-2","CTTCGAGGATATAACC",11,118.73,10.92,0.08,0.05,2.96,1.04,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","CTTCGATACTCTACTA",14,165.75,9.51,-1.32,0.08,1.97,1.08,0,">1 nonsynonymous","A33E N110I L183V",3
"lib2","SARS-CoV-2","CTTCGATGCTCGTTTT",6,69.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V37H K114S N151T P177K S184F",5
"lib2","SARS-CoV-2","CTTCGATTAGCCACGC",3,13.06,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6N A81E I88E N157S",4
"lib2","SARS-CoV-2","CTTCGCAATACCCAAG",2,50.14,10.19,-0.64,0.08,2.8,1.06,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","CTTCGCATCCACTGGA",1,12.41,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","A14V G86C L95M",3
"lib2","SARS-CoV-2","CTTCGCATGATAATGT",8,2.78,NA,NA,NA,NA,NA,NA,"stop","P96* C102N R124P",3
"lib2","SARS-CoV-2","CTTCGCATGCTACCTA",1,11.25,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V37S Y91T F99S Y178A",4
"lib2","SARS-CoV-2","CTTCGCCATTCAATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","F17R A105F P149* V181S",4
"lib2","SARS-CoV-2","CTTCGCCCAAGGTGTA",4,0.7,NA,NA,NA,NA,NA,NA,"stop","S36* F47L E76T A105L F134R P169L",6
"lib2","SARS-CoV-2","CTTCGCGATCAATATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E Y50L G117F Q144N G152T",5
"lib2","SARS-CoV-2","CTTCGCGGGCCAGTAA",2,37.38,10.23,-0.6,0.08,2.91,1.04,0,">1 nonsynonymous","V37Q F62L N64P D90H",4
"lib2","SARS-CoV-2","CTTCGCTCCTAATACC",4,70.46,9.39,-1.45,0.04,2.88,1.08,0,">1 nonsynonymous","I2L T85I F156L G174A",4
"lib2","SARS-CoV-2","CTTCGGACAACTAATA",6,6.83,NA,NA,NA,NA,NA,NA,"stop","D98* L122V Q163I",3
"lib2","SARS-CoV-2","CTTCGGTAAATATGAA",1,6.41,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N64S Y93F A105N Y165H",4
"lib2","SARS-CoV-2","CTTCGGTATCTATGCC",2,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P A81V D90V S139I P177W",5
"lib2","SARS-CoV-2","CTTCGTAAACCATGGT",11,128.67,10.45,-0.39,0.04,2.84,1.1,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","CTTCGTAATTGCATAG",8,86.94,6,-4.84,2,3,1.15,0,"1 nonsynonymous","R179F",1
"lib2","SARS-CoV-2","CTTCGTACAATGGAAT",8,46.26,8.8,-2.03,0.14,2.83,1.12,0.01,">1 nonsynonymous","N118A N171G",2
"lib2","SARS-CoV-2","CTTCGTATTAATGAAA",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83C K114A P149Q",3
"lib2","SARS-CoV-2","CTTCGTCTACGGGAAA",4,43.99,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","A14T K48G G116L Y121A E135N F160E P169E",7
"lib2","SARS-CoV-2","CTTCGTTCGCTTCCAC",2,94.33,10.33,-0.51,0.03,2.93,1.02,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","CTTCGTTTGACGAAAG",1,8.99,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C6R C61Q Y91Q D98S G116L",5
"lib2","SARS-CoV-2","CTTCTAAAAGCTCTGA",1,38.33,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K56L Q84V Q144W C150L",4
"lib2","SARS-CoV-2","CTTCTAAACGAACCAT",4,21.52,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10I S36V I88N C158V",4
"lib2","SARS-CoV-2","CTTCTACAGGAAGTTC",5,155.81,10.7,-0.13,0.03,2.91,1.1,0,"1 nonsynonymous","E10A",1
"lib2","SARS-CoV-2","CTTCTACATAGAGTAA",2,112.57,10.84,0.01,0.06,2.9,1.1,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","CTTCTACATATATATC",9,56.41,10.8,-0.04,0.07,2.91,1.03,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","CTTCTACCACCCAATT",12,151.48,7.76,-3.08,0.23,1.5,1.05,0.02,">1 nonsynonymous","N4T F44S V52P G174W S200A",5
"lib2","SARS-CoV-2","CTTCTACGCGTTGAAA",2,12.56,9,-1.83,0.22,1.67,1.02,0.03,">1 nonsynonymous","N1L P7D Y35N S41V Y91S",5
"lib2","SARS-CoV-2","CTTCTAGCAATAAACC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","N4F T46Y G83* A105R",4
"lib2","SARS-CoV-2","CTTCTATAAGGGCCAA",11,71.94,6,-4.84,0.9,3,1.18,0,">1 nonsynonymous","D68M Q84S D112I",3
"lib2","SARS-CoV-2","CTTCTATACAATTTTA",7,63.21,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L95M N118F Y123T",3
"lib2","SARS-CoV-2","CTTCTATACTCATACG",5,85.75,10.56,-0.28,0.05,2.95,1.02,0,"1 nonsynonymous","N13K",1
"lib2","SARS-CoV-2","CTTCTATAGAACTATG",9,156.43,10.01,-0.83,0.03,2.82,1.05,0,">1 nonsynonymous","N40S N107A S200V",3
"lib2","SARS-CoV-2","CTTCTATCTCCTATAA",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L A105P I142M",3
"lib2","SARS-CoV-2","CTTCTATTCGGCGATT",2,11.97,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C6R P82A K114L P161N",4
"lib2","SARS-CoV-2","CTTCTATTGGGACCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R T170P",2
"lib2","SARS-CoV-2","CTTCTATTTTAGGAAA",1,26.88,9.34,-1.49,0.09,1.93,1.07,0,">1 nonsynonymous","C6L D59W T140R",3
"lib2","SARS-CoV-2","CTTCTCAGAAGATCAA",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R T140S",2
"lib2","SARS-CoV-2","CTTCTCAGGACTAAGC",8,45.21,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35R S69W K87P G101N G146S G172Y",6
"lib2","SARS-CoV-2","CTTCTCCAAAATCTGA",4,45.06,10,-0.84,0.09,2.59,1.09,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","CTTCTCCAACAACCAA",6,145.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G116L N151S T170S P177T",4
"lib2","SARS-CoV-2","CTTCTCCAGCGCCGCT",8,2.47,NA,NA,NA,NA,NA,NA,"stop","Y119C L125* R179S S184A",4
"lib2","SARS-CoV-2","CTTCTCCGATAAAGCC",6,71.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R78D D98W I104N E135F",4
"lib2","SARS-CoV-2","CTTCTCGGTTAGCAAG",9,66.41,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N13K D90L G172R T201R",4
"lib2","SARS-CoV-2","CTTCTCTAGATATGTA",3,7.76,10.75,-0.08,0.12,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCTGAAATGAGGGG",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V F99K A105H",3
"lib2","SARS-CoV-2","CTTCTGACATAACCTA",6,31.54,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N40R D97L S108P Y165M",4
"lib2","SARS-CoV-2","CTTCTGACCCATGTAC",2,59.64,9.84,-1,0.1,2.05,1.05,0,"1 nonsynonymous","P96M",1
"lib2","SARS-CoV-2","CTTCTGACTGATAATA",4,17.18,NA,NA,NA,NA,NA,NA,"stop","G86* A192Y T201V",3
"lib2","SARS-CoV-2","CTTCTGATACTATGAA",1,9.59,10.34,-0.5,0.06,2.96,1.07,0,">1 nonsynonymous","G155S V173A",2
"lib2","SARS-CoV-2","CTTCTGCTCAAACACT",14,260.78,9.44,-1.39,0.05,2.7,1.09,0,">1 nonsynonymous","G9Y L57V G174K",3
"lib2","SARS-CoV-2","CTTCTGGAAATCATGA",3,66.96,10.82,-0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCTGTCAAAACATG",6,0.09,NA,NA,NA,NA,NA,NA,"stop","L5A A33* F70T T85M N107R",5
"lib2","SARS-CoV-2","CTTCTTAAGCCTCACC",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S C49D",2
"lib2","SARS-CoV-2","CTTCTTAATGAATTTG",2,36.43,10.09,-0.74,0.06,2.71,1.04,0,">1 nonsynonymous","N13Y N120M",2
"lib2","SARS-CoV-2","CTTCTTACAGCTCAAT",7,5.59,NA,NA,NA,NA,NA,NA,"stop","T63Y Y175*",2
"lib2","SARS-CoV-2","CTTCTTACCTTACAAG",9,1.91,NA,NA,NA,NA,NA,NA,"stop","R27* L60E R73I D137R G166A",5
"lib2","SARS-CoV-2","CTTCTTAGACATTTTT",1,30.29,10.57,-0.26,0.06,2.91,1.09,0,">1 nonsynonymous","T3I A33Y",2
"lib2","SARS-CoV-2","CTTCTTATGTCACTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","T63* T100M P149L Y175Q",4
"lib2","SARS-CoV-2","CTTCTTCATAACGCCA",5,71.26,10.73,-0.1,0.05,2.83,1.06,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","CTTCTTCATGTGTAAA",2,17.55,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V20R G51F D90F V115R T148W T170L",6
"lib2","SARS-CoV-2","CTTCTTCATTTCCGAG",2,2.86,NA,NA,NA,NA,NA,NA,"stop","R78H V115Y S139G G155N V173*",5
"lib2","SARS-CoV-2","CTTCTTCGCTGCATGC",41,426.99,8.02,-2.82,0.14,2.18,1.06,0.01,">1 nonsynonymous","F126S S164I",2
"lib2","SARS-CoV-2","CTTCTTCTATCTGCTG",2,0,NA,NA,NA,NA,NA,NA,"stop","A33G Y93*",2
"lib2","SARS-CoV-2","CTTCTTGACATACAAG",1,41.26,10.89,0.05,0.07,2.95,1.05,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","CTTCTTGATGATTCTG",5,54.8,10.78,-0.05,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTCTTGGGTAATGCT",1,12.48,9.84,-0.99,0.13,2.87,1,0.01,">1 nonsynonymous","I28F L60G G146F",3
"lib2","SARS-CoV-2","CTTCTTGGGTGACGCC",5,29.03,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","S19L S41T E141P E186F",4
"lib2","SARS-CoV-2","CTTCTTGTATCATCGA",1,18.55,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61Q L95F G101D",3
"lib2","SARS-CoV-2","CTTCTTTATCTCTCAG",7,51.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D59A D98Y A105L",3
"lib2","SARS-CoV-2","CTTCTTTCCATCACAG",3,18.74,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F99K E141V G174L",3
"lib2","SARS-CoV-2","CTTCTTTCGGGATCAC",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142L C158F Q168W",3
"lib2","SARS-CoV-2","CTTGAAAAAACCACCC",9,18.2,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","I104N K128M C158W",3
"lib2","SARS-CoV-2","CTTGAAAAACCAATAC",8,176.5,10.24,-0.6,0.05,2.76,1.06,0,">1 nonsynonymous","N64L N120S T140C",3
"lib2","SARS-CoV-2","CTTGAAAAACCACACC",2,42.08,10.86,0.03,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGAAAAACCGATGT",3,116.95,9.67,-1.17,0.06,2.44,1.17,0,"1 nonsynonymous","R179K",1
"lib2","SARS-CoV-2","CTTGAAAACAGCTCTA",7,4.82,NA,NA,NA,NA,NA,NA,"stop","T3A F99Y A105T S139*",4
"lib2","SARS-CoV-2","CTTGAAAACCTCTTCG",16,230.48,10.67,-0.17,0.03,2.97,1.04,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","CTTGAAAAGACAAAGT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","P54K G83S N130* E135L Y178I",5
"lib2","SARS-CoV-2","CTTGAAAATGTTACTA",5,9.57,NA,NA,NA,NA,NA,NA,"stop","S69T L95* S200V",3
"lib2","SARS-CoV-2","CTTGAAAATTAAGTTA",3,48.04,6.06,-4.77,0.53,1.5,1.09,0.01,">1 nonsynonymous","P82N V181E",2
"lib2","SARS-CoV-2","CTTGAAACAAAGTTTA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","I142* N171Y",2
"lib2","SARS-CoV-2","CTTGAAACACTAACTC",8,57.66,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K128N C158P V173W",3
"lib2","SARS-CoV-2","CTTGAAACATATGAAT",8,178.55,10.78,-0.05,0.04,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGAAAGGGCACCAG",4,122.16,10.72,-0.11,0.03,2.94,1.07,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","CTTGAAATAAACAATG",14,59.81,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V77N T170I",2
"lib2","SARS-CoV-2","CTTGAAATGACGGTAC",2,100.09,8.45,-2.38,0.1,2.84,1.1,0,">1 nonsynonymous","N120P G174L",2
"lib2","SARS-CoV-2","CTTGAAATTTATCCCC",12,295.02,9.37,-1.47,0.05,2.83,1.09,0,">1 nonsynonymous","L5E Q168C",2
"lib2","SARS-CoV-2","CTTGAACAATGAGCAT",13,426.03,10.36,-0.48,0.03,2.89,1.06,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","CTTGAACACCAAAATA",3,9.57,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49I Y93S",2
"lib2","SARS-CoV-2","CTTGAACCATGACTAT",2,38.58,10.98,0.14,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGAACCCCCTAGTT",7,5.24,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I2W N13L S113F T148W N151P N157S",6
"lib2","SARS-CoV-2","CTTGAACGAATACCCA",10,0.52,NA,NA,NA,NA,NA,NA,"stop","V77M K87A I104L N130S G166*",5
"lib2","SARS-CoV-2","CTTGAACGATCCACAT",18,411.72,8.25,-2.58,0.11,2.61,1.09,0,">1 nonsynonymous","S53A Y175V",2
"lib2","SARS-CoV-2","CTTGAACTTAGCTCAA",3,124.16,10.52,-0.32,0.03,2.97,1.02,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","CTTGAAGAAAATTATT",11,77.04,8.4,-2.43,0.2,1.5,1.03,0.02,">1 nonsynonymous","F17R L38Y",2
"lib2","SARS-CoV-2","CTTGAAGACAATCCAT",1,15.67,9.59,-1.25,0.24,1.69,1.22,0.02,">1 nonsynonymous","R25N S129E",2
"lib2","SARS-CoV-2","CTTGAAGAGTCAATCT",6,56.37,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I88S E141A S184M",3
"lib2","SARS-CoV-2","CTTGAAGTCATTCCTT",1,18.82,10.56,-0.28,0.1,2.95,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTTGAATAACTTTAAG",6,49.32,8.57,-2.26,0.14,2.88,1.1,0.01,">1 nonsynonymous","N13Y N30M L125E",3
"lib2","SARS-CoV-2","CTTGAATAATATAGCT",9,93.5,9.83,-1.01,0.09,2.27,1.08,0,">1 nonsynonymous","R16T C49T",2
"lib2","SARS-CoV-2","CTTGAATCAAATCGCG",3,36.05,9.97,-0.87,0.09,2.79,1.03,0,">1 nonsynonymous","S53F G116I",2
"lib2","SARS-CoV-2","CTTGAATGGCCAACAC",9,35.46,6,-4.84,1.58,1.5,1.16,0.02,">1 nonsynonymous","T3F V103L N110R",3
"lib2","SARS-CoV-2","CTTGAATTAGCAGTTG",1,42.3,6,-4.84,2,3,1.12,0,">1 nonsynonymous","E10L R25F T55L K128V R136M",5
"lib2","SARS-CoV-2","CTTGAATTATCCGTCG",1,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R F44G A89Q G166M Q176C",5
"lib2","SARS-CoV-2","CTTGACAAAAAGACGC",2,75.82,8.89,-1.94,0.08,2.47,1.11,0,">1 nonsynonymous","N64Q N107D K198F",3
"lib2","SARS-CoV-2","CTTGACAAATATGGTA",4,146.46,10.63,-0.2,0.04,2.89,1.08,0,"1 nonsynonymous","T15N",1
"lib2","SARS-CoV-2","CTTGACAATCTGCCAC",6,59.4,7.86,-2.98,0.34,1.5,1,0.04,">1 nonsynonymous","F17E Y91V",2
"lib2","SARS-CoV-2","CTTGACAATTAACAGC",11,133.59,10.53,-0.31,0.04,2.92,1.07,0,">1 nonsynonymous","D90S F160C",2
"lib2","SARS-CoV-2","CTTGACACAACCCCAG",9,185.46,10.56,-0.28,0.04,2.85,1.09,0,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","CTTGACATCGAGGAAT",1,55.91,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y39F G155L Y175K",3
"lib2","SARS-CoV-2","CTTGACATTTTCCCTA",11,97.5,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","C49K N120K P149Y N157D",4
"lib2","SARS-CoV-2","CTTGACCCACAATGTA",3,39.99,8.44,-2.4,0.24,1.5,1.01,0.02,">1 nonsynonymous","V77T P133I A190P P197L",4
"lib2","SARS-CoV-2","CTTGACCTCCAGTTGT",11,183.16,10.7,-0.14,0.03,2.99,1.03,0,">1 nonsynonymous","S43R K87R",2
"lib2","SARS-CoV-2","CTTGACCTGGTAGATA",1,31.68,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C6I L57F N58L P133V G155M",5
"lib2","SARS-CoV-2","CTTGACCTTCTAAGTA",4,67.54,10.14,-0.69,0.09,2.57,1.05,0,">1 nonsynonymous","N64R P133V",2
"lib2","SARS-CoV-2","CTTGACGATAGTCTGT",1,11.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K48E L57G N92F",3
"lib2","SARS-CoV-2","CTTGACGATTATCATA",14,1.24,NA,NA,NA,NA,NA,NA,"stop","G9E D59F G83V I104L Y119* I138L",6
"lib2","SARS-CoV-2","CTTGACGCTAACACAT",10,22.67,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A22N S45P T55P I104N G116L Y159V",6
"lib2","SARS-CoV-2","CTTGACGGGACTTTGA",7,1.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31S",1
"lib2","SARS-CoV-2","CTTGACGTACGACAAC",10,124.62,6.13,-4.7,0.56,1.5,1.12,0.01,">1 nonsynonymous","Y39F K87M Y91M D97I S147N Y175V",6
"lib2","SARS-CoV-2","CTTGACGTATCTTAAC",2,29.06,6,-4.84,2,3,1.07,0,">1 nonsynonymous","S139H L183G",2
"lib2","SARS-CoV-2","CTTGACTATGTTATCC",2,75.9,9.47,-1.37,0.05,2.95,1.07,0,"1 nonsynonymous","Y119Q",1
"lib2","SARS-CoV-2","CTTGACTGATCTTACA",2,19.72,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","K48Y P96L C102F Q163S",4
"lib2","SARS-CoV-2","CTTGACTTTTGGAACG",5,109.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G101V D137G T201M",3
"lib2","SARS-CoV-2","CTTGAGAAGTGTTGTC",2,5.74,10.06,-0.78,0.11,2.88,1.06,0,">1 nonsynonymous","K56F N64R",2
"lib2","SARS-CoV-2","CTTGAGAATACGGTAA",5,88.46,10.16,-0.68,0.05,2.8,1.07,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","CTTGAGACCAAGGCCT",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I Q79I L95S",3
"lib2","SARS-CoV-2","CTTGAGACTGGCATAA",2,9.5,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","C49R N107I S113R G116R",4
"lib2","SARS-CoV-2","CTTGAGATTCGTAGTT",2,19.7,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","K132N V180R",2
"lib2","SARS-CoV-2","CTTGAGCAAACAGACA",6,65.98,9.02,-1.81,0.06,2.33,1.12,0,">1 nonsynonymous","C61A R136I P169H H189N",4
"lib2","SARS-CoV-2","CTTGAGCACCGTTGTT",2,8.45,6.24,-4.6,2,1.5,1.29,0.04,">1 nonsynonymous","Y91V P96R P149T G174A",4
"lib2","SARS-CoV-2","CTTGAGCTTTAATCAC",3,32.13,9.3,-1.54,0.19,2.57,1.13,0.02,">1 nonsynonymous","C61V Y119S",2
"lib2","SARS-CoV-2","CTTGAGGCAAGAGTTA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","V20E G51H G116*",3
"lib2","SARS-CoV-2","CTTGAGGTAAGATAGG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","R16V Y35P A42* G166V",4
"lib2","SARS-CoV-2","CTTGAGTCATATCTTT",5,18.49,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","E10I T15H G51C Y121W L131H Q144P",6
"lib2","SARS-CoV-2","CTTGAGTTATAGGGAT",9,78.61,6,-4.84,2,2.25,1.19,0.01,">1 nonsynonymous","S43M K56S A89R L95S N107M R127V",6
"lib2","SARS-CoV-2","CTTGATAAAAAAATAA",11,68.38,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","E10A C102L Q176H",3
"lib2","SARS-CoV-2","CTTGATAAGTCCTCCA",8,157.94,10.83,-0.01,0.05,2.91,1.1,0,"1 nonsynonymous","A192P",1
"lib2","SARS-CoV-2","CTTGATAATTTCTAAG",6,37.62,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6V V37D E76R Y91S T201E",5
"lib2","SARS-CoV-2","CTTGATACTAATTTTG",1,1.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138H",1
"lib2","SARS-CoV-2","CTTGATATACAACCCT",3,19.89,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L5M Y50S L131P I138M T148G G174L",6
"lib2","SARS-CoV-2","CTTGATATACGCAATG",2,7.55,8.8,-2.03,0.33,1.5,1.23,0.03,">1 nonsynonymous","F17R I28W T140H V173F",4
"lib2","SARS-CoV-2","CTTGATATCTTCACAA",3,7.83,NA,NA,NA,NA,NA,NA,"stop","S19* L122I N157D Q176N S184M",5
"lib2","SARS-CoV-2","CTTGATCGGGCGCGTG",4,39.06,10.12,-0.71,0.07,2.8,1.06,0,"1 nonsynonymous","L57P",1
"lib2","SARS-CoV-2","CTTGATGATAAAGCCT",14,4.28,NA,NA,NA,NA,NA,NA,"stop","W106P S147*",2
"lib2","SARS-CoV-2","CTTGATGGACTATACA",3,9.38,8.1,-2.74,0.38,1.81,1.06,0.06,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","CTTGATGGATCAACCC",4,17.88,10.14,-0.69,0.11,2.87,1.07,0.01,">1 nonsynonymous","P149N T170Q",2
"lib2","SARS-CoV-2","CTTGATGGGCGTTCCC",3,70.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9R I80F Y119A H189R",4
"lib2","SARS-CoV-2","CTTGATGGTCCGGAGG",4,14.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S G86R Q176S",3
"lib2","SARS-CoV-2","CTTGATTAATTTAATG",6,723.87,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N4S G172Q",2
"lib2","SARS-CoV-2","CTTGATTACACAGAAA",2,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H F62S N120L",3
"lib2","SARS-CoV-2","CTTGATTACCCCCAAG",1,59.73,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V71A D112T S147I P177L",4
"lib2","SARS-CoV-2","CTTGATTATTTACGAA",2,110.14,10.9,0.07,0.04,2.94,1.07,0,">1 nonsynonymous","L5T Y35W K56R",3
"lib2","SARS-CoV-2","CTTGATTTCAAAGTTA",7,13.95,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","A22F A33T V103D P169R T201S",5
"lib2","SARS-CoV-2","CTTGATTTGAATATCT",2,8.84,10.79,-0.04,0.1,2.82,1.2,0.01,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","CTTGATTTTAATAGGT",6,183.03,10.12,-0.72,0.03,2.77,1.09,0,">1 nonsynonymous","E10L D97S V173N",3
"lib2","SARS-CoV-2","CTTGCAAAAAAGGACA",3,118.88,8.65,-2.19,0.12,1.59,1.15,0.01,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","CTTGCAAAGTCCATAG",9,85.74,9.2,-1.63,0.07,1.88,1.05,0,">1 nonsynonymous","R16I V37F K56T R127T K199L",5
"lib2","SARS-CoV-2","CTTGCAACCGTGAGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","G51I K56S N130* A145R G166E",5
"lib2","SARS-CoV-2","CTTGCAACGGGAATTG",6,11.87,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5M A14L K56L D97Y F167V",5
"lib2","SARS-CoV-2","CTTGCAAGCATAATGT",2,1.46,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib2","SARS-CoV-2","CTTGCAATAGCTATCT",6,124.15,10.66,-0.18,0.04,2.98,1.04,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","CTTGCAATCATTAACC",2,45.54,10.73,-0.11,0.03,2.97,1.01,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","CTTGCACAAGCAAGTT",1,14.07,10.81,-0.03,0.06,2.93,1.12,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","CTTGCACACGAATCCT",4,21.83,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9N Y50D K114M T148A V173F",5
"lib2","SARS-CoV-2","CTTGCACAGAAAGACT",4,55.75,10.31,-0.53,0.05,2.74,1.05,0,">1 nonsynonymous","L122A Q163C Y178L T201G",4
"lib2","SARS-CoV-2","CTTGCACATAACGTAC",1,5.56,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","Y50N K56E W106T",3
"lib2","SARS-CoV-2","CTTGCACCGGTAGGTC",2,7.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R G51V V77A L162T",4
"lib2","SARS-CoV-2","CTTGCACCTACCATGC",2,19.99,6.05,-4.79,1.07,1.5,1.19,0.06,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","CTTGCACTTGAACAAT",1,20.25,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A105S D137M G155F",3
"lib2","SARS-CoV-2","CTTGCAGAACCCAGAC",3,38.11,10.63,-0.21,0.06,2.8,1.19,0,">1 nonsynonymous","S36F I104F",2
"lib2","SARS-CoV-2","CTTGCAGACCTGTTCT",4,18.73,9.86,-0.98,0.09,2.52,1,0.01,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","CTTGCAGACGAGAGTT",13,175.27,9.8,-1.04,0.04,2.74,1.04,0,">1 nonsynonymous","C6L T15L T148F",3
"lib2","SARS-CoV-2","CTTGCAGCCCAATTTT",10,91.03,6,-4.84,2,3,1.13,0,">1 nonsynonymous","K94Y G146P",2
"lib2","SARS-CoV-2","CTTGCAGGATGATTTG",11,184.43,8.36,-2.47,0.15,2.89,1.09,0.01,">1 nonsynonymous","F126S S147R",2
"lib2","SARS-CoV-2","CTTGCAGGGCCACGTG",8,121.02,7.24,-3.6,0.27,1.5,1.09,0.02,">1 nonsynonymous","Y35R R127M",2
"lib2","SARS-CoV-2","CTTGCATAACCCGAAA",4,49.67,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6L S29F S45E C158S",4
"lib2","SARS-CoV-2","CTTGCATCTAAACATA",3,1.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I A81R D98H",3
"lib2","SARS-CoV-2","CTTGCATGATCTATTT",1,20.59,6.25,-4.59,1.21,1.5,1.26,0.07,">1 nonsynonymous","L38P D97T C102I T170R",4
"lib2","SARS-CoV-2","CTTGCATTCGGTATGG",14,59.68,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","CTTGCATTGAGAGATG",1,55.08,10.88,0.04,0.08,2.94,1.08,0,"1 nonsynonymous","P197E",1
"lib2","SARS-CoV-2","CTTGCCAAAAATAATT",18,127.63,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","L57F A105S P161D",3
"lib2","SARS-CoV-2","CTTGCCAGACTGAGAT",3,69.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R73L P177L",2
"lib2","SARS-CoV-2","CTTGCCAGCGGTTTAA",3,18.7,10.46,-0.37,0.07,2.89,1.06,0,">1 nonsynonymous","V52T D98N P149F A190N",4
"lib2","SARS-CoV-2","CTTGCCAGTTCCAACG",3,0.21,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","CTTGCCCATCAAAAAC",3,15.42,8.91,-1.93,0.16,2.71,1.16,0.01,">1 nonsynonymous","C6M G166A",2
"lib2","SARS-CoV-2","CTTGCCTAGAGAACGT",4,15.47,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G117E V180S",2
"lib2","SARS-CoV-2","CTTGCCTAGGTCATAC",6,44.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2D L38P F99G",3
"lib2","SARS-CoV-2","CTTGCCTCGGTTATAT",12,3.96,NA,NA,NA,NA,NA,NA,"stop","G9W A42S N58V S113V E141* G155I",6
"lib2","SARS-CoV-2","CTTGCGAAGTGCAAGT",13,9.36,NA,NA,NA,NA,NA,NA,"stop","T3K S113* V153L",3
"lib2","SARS-CoV-2","CTTGCGAGCAAGCATA",5,145.08,9.69,-1.14,0.05,2.87,1.09,0,">1 nonsynonymous","L60T Q168G",2
"lib2","SARS-CoV-2","CTTGCGATACCAACTA",2,20.6,6,-4.84,2,2.38,1.05,0,">1 nonsynonymous","G86K P96Q V103L",3
"lib2","SARS-CoV-2","CTTGCGATGAGACTCA",5,52.44,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38S K56M D98R I142V F167P",5
"lib2","SARS-CoV-2","CTTGCGCTGCCCTTAC",1,13.12,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V37R C61R C102T L183F",4
"lib2","SARS-CoV-2","CTTGCGGACCATAGCA",13,181.77,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D90K C158I",2
"lib2","SARS-CoV-2","CTTGCGGATTACCTTC",4,48.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T46N D90E G101F P133S",4
"lib2","SARS-CoV-2","CTTGCGGCCGGAGAGG",4,63.18,9.99,-0.85,0.08,2.34,1.05,0,">1 nonsynonymous","S41D K94G N120S",3
"lib2","SARS-CoV-2","CTTGCGGTAACTATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S T100P G172*",3
"lib2","SARS-CoV-2","CTTGCGTAAATTTTTC",5,25.4,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","W106N T148R G174K F185L",4
"lib2","SARS-CoV-2","CTTGCTAAACATGCAG",2,50.38,10.12,-0.72,0.08,2.59,1.02,0,"1 nonsynonymous","E135W",1
"lib2","SARS-CoV-2","CTTGCTAACAAACATC",4,34.8,6.68,-4.16,0.41,1.5,1.15,0.02,">1 nonsynonymous","C61M D112S",2
"lib2","SARS-CoV-2","CTTGCTAATGATGGTG",4,38.57,7.73,-3.1,0.23,1.5,1.11,0.02,">1 nonsynonymous","G86T I104V",2
"lib2","SARS-CoV-2","CTTGCTAATTTATCAG",7,56.56,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","S29E K94E D97V",3
"lib2","SARS-CoV-2","CTTGCTACGGTATGAA",4,56.52,8.23,-2.61,0.08,2.25,1.13,0,">1 nonsynonymous","N1G T15Y G166V",3
"lib2","SARS-CoV-2","CTTGCTATTAAACGTT",1,2.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","CTTGCTATTAAGATAG",2,20.19,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N40R N64K N107K Y119S R124H Y175S",6
"lib2","SARS-CoV-2","CTTGCTCACTCAAAGG",2,0.81,NA,NA,NA,NA,NA,NA,"stop","V11L N24R D59* F160K",4
"lib2","SARS-CoV-2","CTTGCTCTAACTATAT",1,13.13,6.54,-4.3,0.66,1.5,1.16,0.05,">1 nonsynonymous","S19R K94M S129E",3
"lib2","SARS-CoV-2","CTTGCTCTCTTACTCC",5,127.06,10.53,-0.31,0.05,2.88,1.08,0,"1 nonsynonymous","V115G",1
"lib2","SARS-CoV-2","CTTGCTGACCACAATA",7,0.81,NA,NA,NA,NA,NA,NA,"stop","L60* A67S F99C G196R",4
"lib2","SARS-CoV-2","CTTGCTGACTCTTCAG",3,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M D90R N107R Q163V L183T",5
"lib2","SARS-CoV-2","CTTGCTGATACACCCG",4,21.92,10.82,-0.02,0.08,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGCTGTGTATCGGT",2,28.83,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I2L E10N Y93M V115S",4
"lib2","SARS-CoV-2","CTTGCTTAAACAATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114W R127T",2
"lib2","SARS-CoV-2","CTTGCTTTCTAAATAT",7,47.82,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","T15S P96W G116I",3
"lib2","SARS-CoV-2","CTTGCTTTGAATGGCT",11,163.29,8.53,-2.31,0.09,2.76,1.07,0,">1 nonsynonymous","F134Q A145Y K199L",3
"lib2","SARS-CoV-2","CTTGGAAACTCCTAAA",7,689.9,10.81,-0.03,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGGAAAGAATGAAA",1,1.22,NA,NA,NA,NA,NA,NA,"stop","S41N P82*",2
"lib2","SARS-CoV-2","CTTGGAACAACTTTAC",6,42.59,8.26,-2.57,0.1,2.2,1.09,0,">1 nonsynonymous","Y21M F156C",2
"lib2","SARS-CoV-2","CTTGGAAGTAATGCAG",2,22.14,10.51,-0.33,0.05,3,1.02,0,">1 nonsynonymous","P96S G196R",2
"lib2","SARS-CoV-2","CTTGGAATAGTAGGAT",8,214.28,10.17,-0.67,0.03,2.88,1.06,0,">1 nonsynonymous","A33K T201K",2
"lib2","SARS-CoV-2","CTTGGAATAGTCTGAC",2,23.41,6.06,-4.78,1.38,1.5,1.21,0.04,">1 nonsynonymous","R25P N40M R127Q E154N",4
"lib2","SARS-CoV-2","CTTGGACAAGTGCCAA",1,20.19,10.78,-0.05,0.05,3,1,0,">1 nonsynonymous","V37N K87F S129G",3
"lib2","SARS-CoV-2","CTTGGACAATGTGAGT",11,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76S P96N N120P N151F T201L",5
"lib2","SARS-CoV-2","CTTGGACCATTAAGAC",3,152.12,10.34,-0.49,0.03,2.85,1.07,0,">1 nonsynonymous","T46V E135M",2
"lib2","SARS-CoV-2","CTTGGACTCTCCACAA",9,10.64,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13Q C102V L122Y P191R",4
"lib2","SARS-CoV-2","CTTGGAGTACCATCAT",2,22.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L60I G101R L122P N151Q P191S",5
"lib2","SARS-CoV-2","CTTGGATCAGTACTGG",10,38.97,6.79,-4.05,0.45,1.5,1.15,0.03,">1 nonsynonymous","G9S A89R V115L P149C",4
"lib2","SARS-CoV-2","CTTGGATCATCTATTT",5,117.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127S G155I",2
"lib2","SARS-CoV-2","CTTGGATTAATCGCAA",11,182.58,9.33,-1.5,0.06,2.59,1.07,0,">1 nonsynonymous","R27P K87S N110S Q144D",4
"lib2","SARS-CoV-2","CTTGGCAAACGAGATA",5,20.87,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F47S D112T Q163I",3
"lib2","SARS-CoV-2","CTTGGCAAATGAAAGA",5,36.68,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","R124L D137T P149L",3
"lib2","SARS-CoV-2","CTTGGCAGTCCATTTT",1,15.07,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","I2G D68K T201F",3
"lib2","SARS-CoV-2","CTTGGCATTTATCGAA",10,201.03,10.14,-0.7,0.04,2.5,1.05,0,">1 nonsynonymous","V32L P133Q",2
"lib2","SARS-CoV-2","CTTGGCTAAATACTAC",21,88.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K94F Y165Q V180N",3
"lib2","SARS-CoV-2","CTTGGCTCGATTGCAT",1,15.24,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G51A A89P F99G",3
"lib2","SARS-CoV-2","CTTGGGACTAAGCGAC",6,94.95,6,-4.84,1.61,1.5,1.18,0.03,">1 nonsynonymous","P7W D112S",2
"lib2","SARS-CoV-2","CTTGGGGTGCCCCAAA",7,30.09,6.59,-4.25,0.51,1.5,1.21,0.03,">1 nonsynonymous","L60A V103P",2
"lib2","SARS-CoV-2","CTTGGGGTTAGGCTAA",8,47.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86E N157F",2
"lib2","SARS-CoV-2","CTTGGTAAGTAGAACA",8,2.17,NA,NA,NA,NA,NA,NA,"stop","P82M G101* S129T",3
"lib2","SARS-CoV-2","CTTGGTACTAGGGCAA",4,122.43,9.83,-1.01,0.04,2.94,1.06,0,">1 nonsynonymous","Y35V C61I K87G K132R",4
"lib2","SARS-CoV-2","CTTGGTATGCTGATTA",8,208.67,10.93,0.09,0.08,2.86,1.08,0,"1 nonsynonymous","V153R",1
"lib2","SARS-CoV-2","CTTGGTGTGTATCACA",7,115.91,10.95,0.11,0.06,2.97,1.06,0,"1 nonsynonymous","I104F",1
"lib2","SARS-CoV-2","CTTGGTTTTTGTAGAC",6,61.33,10.7,-0.13,0.06,2.94,1.09,0,"1 nonsynonymous","K94R",1
"lib2","SARS-CoV-2","CTTGTAAAAAATGATC",7,41.03,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A14Q V37S L60I F70Y K94F W106V R127P",7
"lib2","SARS-CoV-2","CTTGTAAGACCCGTTT",6,57.52,7.56,-3.28,0.1,1.5,1.07,0,"1 nonsynonymous","A22P",1
"lib2","SARS-CoV-2","CTTGTAAGCAAGAGAA",3,122.3,6.44,-4.39,0.42,1.5,1.1,0.02,">1 nonsynonymous","S45L T148S Y178D",3
"lib2","SARS-CoV-2","CTTGTAAGCGAGCGAT",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T C61A S69V I104R A145L",5
"lib2","SARS-CoV-2","CTTGTAATACCACGGC",8,214.84,9.79,-1.04,0.03,2.62,1.04,0,">1 nonsynonymous","C61R N92S",2
"lib2","SARS-CoV-2","CTTGTAATATTAAGAC",5,22.74,6.24,-4.6,0.86,1.5,1.12,0.03,">1 nonsynonymous","C6Y N64S K94L T140F P161A",5
"lib2","SARS-CoV-2","CTTGTAATTAGGGAAA",2,39.17,10.74,-0.1,0.03,2.99,1.02,0,">1 nonsynonymous","D98G V115L",2
"lib2","SARS-CoV-2","CTTGTACATCAATATC",12,101.46,6.2,-4.64,0.77,1.5,1.18,0.02,">1 nonsynonymous","C49V D90Q F126Q",3
"lib2","SARS-CoV-2","CTTGTACCAAAGATAA",5,67,10.92,0.09,0.05,2.95,1.06,0,"1 nonsynonymous","R16V",1
"lib2","SARS-CoV-2","CTTGTACCTTCCACGA",1,30.69,10.81,-0.02,0.07,2.91,1.1,0,">1 nonsynonymous","R27Q V37G",2
"lib2","SARS-CoV-2","CTTGTACTAGGACAAT",3,23.95,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R73E K87L P133I N157L",4
"lib2","SARS-CoV-2","CTTGTACTCGATCAAT",2,28.25,9.08,-1.75,0.18,1.87,1.08,0.01,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","CTTGTATAACTCTCAA",2,103.16,10.83,0,0.06,2.9,1.09,0,">1 nonsynonymous","S43L D97H",2
"lib2","SARS-CoV-2","CTTGTATGCTGCGTAC",10,180.86,6,-4.84,1.83,1.5,1.23,0.01,">1 nonsynonymous","A89D T140I Q176S",3
"lib2","SARS-CoV-2","CTTGTATTACTCCCTA",6,85.44,10.83,-0.01,0.05,2.86,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTGTCAAATTTTTTA",2,41.8,9.09,-1.75,0.17,1.52,1.06,0.02,">1 nonsynonymous","N13I N58P N120S K199M",4
"lib2","SARS-CoV-2","CTTGTCAACGAGAAAT",5,48.07,10.86,0.02,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTGTCAACTCACTCG",14,249.22,10.18,-0.66,0.02,2.97,1.05,0,">1 nonsynonymous","S147T E154V",2
"lib2","SARS-CoV-2","CTTGTCAATCATAAGG",2,41.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28F V37W I88L L95D E141C V173F",6
"lib2","SARS-CoV-2","CTTGTCACACCCATCG",10,61.29,7.09,-3.74,0.42,1.5,1.06,0.05,">1 nonsynonymous","A89R N107Y P149T",3
"lib2","SARS-CoV-2","CTTGTCACAGGAATGG",1,14.27,8.93,-1.9,0.11,1.95,1.17,0.01,">1 nonsynonymous","C6E V37L D75L",3
"lib2","SARS-CoV-2","CTTGTCACTGAGTCCA",1,48.46,10.22,-0.62,0.1,2.24,1.03,0,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","CTTGTCAGAATCACCT",4,17.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T15C Y91R Y119L",3
"lib2","SARS-CoV-2","CTTGTCCATAATATTG",3,8.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L60H V103E T148Q Q168M",4
"lib2","SARS-CoV-2","CTTGTCCGTGACGCGG",3,44.02,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A14V A33N S41T Y119R E135H S147P Y165T",7
"lib2","SARS-CoV-2","CTTGTCGATCAGACAC",8,64.54,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K94S C102Q",2
"lib2","SARS-CoV-2","CTTGTCGGAGATAGAT",9,50.59,6.29,-4.54,0.3,1.72,1.14,0.01,">1 nonsynonymous","N1S S113H E135L L162F",4
"lib2","SARS-CoV-2","CTTGTCGTCGGTCACA",2,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L D68S",2
"lib2","SARS-CoV-2","CTTGTCTAATTGGAAA",4,84.21,10.75,-0.09,0.04,2.88,1.06,0,"1 nonsynonymous","V32A",1
"lib2","SARS-CoV-2","CTTGTCTCAAGACGAG",2,0.73,NA,NA,NA,NA,NA,NA,"stop","V65Q T85* Y143Q",3
"lib2","SARS-CoV-2","CTTGTGACAGTTAACG",4,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y Y178A",2
"lib2","SARS-CoV-2","CTTGTGTAAGCCAATA",16,236.81,10.05,-0.79,0.03,2.78,1.06,0,">1 nonsynonymous","F62A T85E G152C",3
"lib2","SARS-CoV-2","CTTGTTAACAATGTTA",6,55,9.28,-1.56,0.15,1.67,1.11,0.01,">1 nonsynonymous","A18L T140G Q144S",3
"lib2","SARS-CoV-2","CTTGTTAAGTGGCAAC",7,100.31,10.54,-0.29,0.02,2.9,1.1,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","CTTGTTAGATGGATTT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","Y21* K56G",2
"lib2","SARS-CoV-2","CTTGTTAGGAGTACAG",9,6.2,NA,NA,NA,NA,NA,NA,"stop","A14* C61A",2
"lib2","SARS-CoV-2","CTTGTTCAAAGGATTA",2,19,10.88,0.04,0.12,2.92,1.09,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","CTTGTTCACATCTACA",11,316.95,10.24,-0.6,0.03,2.89,1.1,0,">1 nonsynonymous","G83R G174K",2
"lib2","SARS-CoV-2","CTTGTTCACTATAGCA",5,22.7,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41M Q84P C102A N110D G116R",5
"lib2","SARS-CoV-2","CTTGTTCCCGTCGACT",2,10.1,10.75,-0.08,0.07,2.9,1,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","CTTGTTCGAAACTGCC",3,26.59,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","I28V T63N R73I F99M Y119W",5
"lib2","SARS-CoV-2","CTTGTTCGAAGACATA",3,46.94,9.18,-1.65,0.06,2.89,1.1,0,">1 nonsynonymous","T15L L125P F160R",3
"lib2","SARS-CoV-2","CTTGTTCGCTGTGGTC",5,3.39,NA,NA,NA,NA,NA,NA,"stop","A18M K26M K48E G86I N151*",5
"lib2","SARS-CoV-2","CTTGTTGAATACGCTA",1,27.48,6.7,-4.14,0.46,1.5,1.18,0.03,">1 nonsynonymous","R25S S53L Y119C",3
"lib2","SARS-CoV-2","CTTGTTGCTGCCAACT",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S S41Y G86V E135L I142S P149N",6
"lib2","SARS-CoV-2","CTTGTTGGGTAAAAGC",5,63.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I104F R127C N157V V182K",4
"lib2","SARS-CoV-2","CTTGTTTAGGAATGAT",4,76.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59V I138L Y159C",3
"lib2","SARS-CoV-2","CTTGTTTATTCATGTT",4,9.67,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S41I F134S V180K",3
"lib2","SARS-CoV-2","CTTGTTTTAGTGCAAA",6,20.81,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I2S R27I A81Y G86Q L125G",5
"lib2","SARS-CoV-2","CTTTAAAAATAAAAAT",3,34.89,10.84,0,0.06,2.95,1.04,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","CTTTAAAACCGGCGTT",10,323.21,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S19E S36L C61P W106L V153R Y178V",6
"lib2","SARS-CoV-2","CTTTAAAATATGCCTA",9,124.96,6,-4.84,1.33,1.5,1.19,0.01,">1 nonsynonymous","F8C Y121K",2
"lib2","SARS-CoV-2","CTTTAAAATTATGAAT",16,2.45,NA,NA,NA,NA,NA,NA,"stop","G86Y G116L S129*",3
"lib2","SARS-CoV-2","CTTTAAACCTCATGTT",6,54.63,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9N A18T R25M D68A I88R V173E V180I",7
"lib2","SARS-CoV-2","CTTTAAAGACTAAAAT",6,64.39,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L5T D97N N107Y G146L Y178F",5
"lib2","SARS-CoV-2","CTTTAAATAAAATTAA",3,63.28,10.93,0.09,0.06,2.85,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTTAAATAATACATA",12,105.27,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","R124P",1
"lib2","SARS-CoV-2","CTTTAAATTAATATGT",1,23.15,8.7,-2.14,0.08,2.85,1.08,0,">1 nonsynonymous","V32L G117P",2
"lib2","SARS-CoV-2","CTTTAAATTAGACAAC",2,38.76,6.02,-4.82,0.82,1.81,1.25,0.01,">1 nonsynonymous","Y35D E141G Y175S",3
"lib2","SARS-CoV-2","CTTTAAATTAGCAACT",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M A14S D59G Q144Y",4
"lib2","SARS-CoV-2","CTTTAAATTTCATCAA",9,107.08,10.85,0.02,0.03,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTAACAATATTCCG",6,1.49,NA,NA,NA,NA,NA,NA,"stop","F8L G9K V71Q I138* G155I",5
"lib2","SARS-CoV-2","CTTTAACAGAGAATTA",2,10.2,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","S45H R73E I104Y E141R L162H",5
"lib2","SARS-CoV-2","CTTTAACCTCACCAGG",9,52.27,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V37R P82M S113G K128V",4
"lib2","SARS-CoV-2","CTTTAACCTCTTAGGT",1,32.24,10.4,-0.44,0.06,2.87,1.05,0,">1 nonsynonymous","Q144R P149F",2
"lib2","SARS-CoV-2","CTTTAACGAATTTCCA",1,7.24,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50A D90T",2
"lib2","SARS-CoV-2","CTTTAACGCCGGATCA",1,11.19,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","N40V G86S N92K",3
"lib2","SARS-CoV-2","CTTTAACTTCCTAAAC",13,222.86,10.67,-0.16,0.01,2.93,1.05,0,">1 nonsynonymous","N4Q S53F",2
"lib2","SARS-CoV-2","CTTTAAGAAAGGAAAG",5,26.71,6.1,-4.74,1.23,1.5,1.26,0.03,">1 nonsynonymous","R16G I88K W106C",3
"lib2","SARS-CoV-2","CTTTAAGACTTCTAGA",7,120.43,6.72,-4.12,0.36,1.5,1.22,0.01,">1 nonsynonymous","R127T G155S",2
"lib2","SARS-CoV-2","CTTTAAGCATGTTTGA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","CTTTAAGCCTACACTA",2,22.7,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","I72Y",1
"lib2","SARS-CoV-2","CTTTAAGGGCCGACGC",3,32.21,9.25,-1.58,0.12,1.89,1.04,0,">1 nonsynonymous","G9S Y35T A89G",3
"lib2","SARS-CoV-2","CTTTAAGGTTCCCTCA",2,13.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16N G86I L122Q T148N",4
"lib2","SARS-CoV-2","CTTTAATACAGAACAT",11,53.41,6.29,-4.55,0.5,1.9,1.17,0.01,">1 nonsynonymous","I88N I104F",2
"lib2","SARS-CoV-2","CTTTAATAGTGAACAA",7,61.05,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F99M Y143S",2
"lib2","SARS-CoV-2","CTTTAATATCAATTAT",1,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V L57Y D98L L131A E154M",5
"lib2","SARS-CoV-2","CTTTAATCAAGGCGAG",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93Q W106K G172T",3
"lib2","SARS-CoV-2","CTTTAATCAAGGGTAG",6,2.46,NA,NA,NA,NA,NA,NA,"stop","A14V N64* V65I A81Q D97Y W106A Y121R",7
"lib2","SARS-CoV-2","CTTTAATCAGTCTCAA",1,171.45,6.07,-4.76,0.62,1.5,1.16,0.01,">1 nonsynonymous","V11R N40P Y91G",3
"lib2","SARS-CoV-2","CTTTAATCCAGGCTAT",2,27.11,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","Y66E Y143M Y159C",3
"lib2","SARS-CoV-2","CTTTAATGTATCAAAC",2,108.4,9.83,-1,0.08,2.17,1.06,0,">1 nonsynonymous","R16T D90S G116Q L131V E141Q",5
"lib2","SARS-CoV-2","CTTTAATGTTATATAA",2,57.15,10.77,-0.07,0.05,2.94,1.07,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","CTTTAATGTTCTACCG",4,15.31,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","L183R",1
"lib2","SARS-CoV-2","CTTTAATTAATCCGTA",3,8.89,6,-4.84,2,1.5,1.1,0.04,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","CTTTAATTGGGAACCC",11,64.43,6,-4.84,2,3,1.33,0,">1 nonsynonymous","T3I V11F T55E D98V K128I Y159V P177T V180N",8
"lib2","SARS-CoV-2","CTTTAATTTACTCCGT",6,161.23,9.4,-1.43,0.1,1.98,1.04,0,">1 nonsynonymous","L5V N24S G86S K128S",4
"lib2","SARS-CoV-2","CTTTACAACGACAAAT",5,28.71,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D68G N109G",2
"lib2","SARS-CoV-2","CTTTACAAGGGTAAAA",3,25.57,6,-4.84,2,2.65,1.18,0.02,">1 nonsynonymous","S36M R179N F185I T201C",4
"lib2","SARS-CoV-2","CTTTACAAGTCAAAAT",4,39.11,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","E10G Y50F N107G K132T E141K",5
"lib2","SARS-CoV-2","CTTTACAATGATAAAA",2,36.8,6.97,-3.86,0.23,1.66,1.12,0.01,">1 nonsynonymous","R27M G86Y",2
"lib2","SARS-CoV-2","CTTTACAGAGTATGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P Y91G D112G",3
"lib2","SARS-CoV-2","CTTTACAGATTTTTCT",7,188.78,8.57,-2.27,0.08,2.96,1.08,0,">1 nonsynonymous","F44N T148F F156L",3
"lib2","SARS-CoV-2","CTTTACAGGAGTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33S L162*",2
"lib2","SARS-CoV-2","CTTTACAGGCATGAGT",3,13.43,9.68,-1.16,0.16,2.03,1.2,0.01,"1 nonsynonymous","W23S",1
"lib2","SARS-CoV-2","CTTTACATAGAGAGTG",4,81.11,10.85,0.02,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTACCACAGAAGGT",3,84.52,10.07,-0.76,0.04,2.54,1.02,0,"1 nonsynonymous","C49F",1
"lib2","SARS-CoV-2","CTTTACCATTAATTCC",6,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M R124F V173P G196Q",4
"lib2","SARS-CoV-2","CTTTACCCACCACCGG",7,110.72,10.82,-0.01,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTACCCCTACGCTA",13,1.33,NA,NA,NA,NA,NA,NA,"stop","C6M L60R G166*",3
"lib2","SARS-CoV-2","CTTTACCGTCTGATGA",6,33.61,10.44,-0.39,0.03,2.94,1.06,0,">1 nonsynonymous","D97T E141Y",2
"lib2","SARS-CoV-2","CTTTACCTAAAAAGAT",2,34.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6N A14V G83D E135L S184I",5
"lib2","SARS-CoV-2","CTTTACGAGAAATTTA",5,117.94,10.84,0,0.04,2.9,1.12,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","CTTTACGCAAACTGAT",1,11.55,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","E10L D97G L122T N151H Y159T",5
"lib2","SARS-CoV-2","CTTTACTATCTCGATA",3,6.82,10.68,-0.16,0.17,2.59,1.2,0.01,"1 nonsynonymous","S113H",1
"lib2","SARS-CoV-2","CTTTACTGAATAAATA",7,31.73,10.3,-0.53,0.08,2.73,1.14,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","CTTTACTGCGAAACTC",4,28.45,10.76,-0.08,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTACTTACACGACG",8,102.37,9.94,-0.9,0.05,2.02,1.06,0,">1 nonsynonymous","L5K E76K Y91F",3
"lib2","SARS-CoV-2","CTTTACTTAGTTCCCA",6,105.54,9.25,-1.59,0.1,1.75,1.06,0,">1 nonsynonymous","T3S A14L S69L",3
"lib2","SARS-CoV-2","CTTTACTTGCAAATTA",7,140.87,10.82,-0.01,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTAGAACCGGGTGT",2,8.99,9.61,-1.23,0.14,2.08,1.04,0.02,">1 nonsynonymous","K132I E141W N151S",3
"lib2","SARS-CoV-2","CTTTAGAATAGCCTTT",13,5.75,NA,NA,NA,NA,NA,NA,"stop","R27N A81* Q84F P96T E141R G166I N171S",7
"lib2","SARS-CoV-2","CTTTAGAATTGTAACG",1,16.26,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S45M D90P",2
"lib2","SARS-CoV-2","CTTTAGACGAAGGACA",2,7.33,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","T63P S113Y F156E",3
"lib2","SARS-CoV-2","CTTTAGAGAAAAGAAA",8,170.92,10.88,0.05,0.04,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTTAGAGGAGGTTAA",6,63.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C31R K56G Y143L T170I P197L",5
"lib2","SARS-CoV-2","CTTTAGCTTCACTTAT",5,19.15,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N4I S19G A89D P149F",4
"lib2","SARS-CoV-2","CTTTAGGAAATTGGAC",15,2.89,NA,NA,NA,NA,NA,NA,"stop","P96* A190V T201M",3
"lib2","SARS-CoV-2","CTTTAGGGAGCACATA",14,53.73,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15S D59G V77K Y119R S139P P149L Y165L",7
"lib2","SARS-CoV-2","CTTTAGTAAAAAGGAT",8,44.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20E V32P C102S S139Y T170V",5
"lib2","SARS-CoV-2","CTTTAGTAGCGAATGC",2,14.38,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","R27P F99P P161Y P169L",4
"lib2","SARS-CoV-2","CTTTAGTGCGGTAATA",4,44.15,10.55,-0.29,0.05,2.93,1.08,0,">1 nonsynonymous","T100H Y123S S184I P197T",4
"lib2","SARS-CoV-2","CTTTAGTTATTAAGTA",3,6.85,10.86,0.02,0.12,2.71,1.28,0.01,"wildtype","",0
"lib2","SARS-CoV-2","CTTTATAAGCTGTTGT",2,10.29,8.17,-2.67,0.25,1.73,1.04,0.02,">1 nonsynonymous","N120V S139V Q168L",3
"lib2","SARS-CoV-2","CTTTATAAGTCTGGTA",8,41.08,8.14,-2.7,0.22,1.5,1.04,0.02,">1 nonsynonymous","I2S V77W P169T",3
"lib2","SARS-CoV-2","CTTTATAATTCACATA",6,77.91,10.89,0.06,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTATAATTTCCACT",6,81.07,10.7,-0.14,0.04,2.93,1.08,0,"1 nonsynonymous","N120Y",1
"lib2","SARS-CoV-2","CTTTATACAAGAATAG",13,123.47,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","R27S Y50H S147H N151F Q176R",5
"lib2","SARS-CoV-2","CTTTATACAATATATT",5,3.11,NA,NA,NA,NA,NA,NA,"stop","G116L S129G Q144S Y175* V180I",5
"lib2","SARS-CoV-2","CTTTATACAGCAATAG",2,32,6.51,-4.33,0.44,1.5,1.14,0.02,">1 nonsynonymous","T3K A18P R25V D59K N118M",5
"lib2","SARS-CoV-2","CTTTATACATGAAGAT",7,157.46,10.14,-0.7,0.03,2.71,1.05,0,">1 nonsynonymous","D34R P54S",2
"lib2","SARS-CoV-2","CTTTATACGCATTCGG",9,320.88,10.43,-0.41,0.03,2.94,1.06,0,">1 nonsynonymous","Y39K K87R E141L",3
"lib2","SARS-CoV-2","CTTTATACTCAAAACC",12,3.48,NA,NA,NA,NA,NA,NA,"stop","S43M P133*",2
"lib2","SARS-CoV-2","CTTTATAGCACTAGCA",5,36.82,6.18,-4.66,0.81,1.5,1.14,0.02,">1 nonsynonymous","P96V G174P A190V",3
"lib2","SARS-CoV-2","CTTTATAGTATTACTG",3,10.14,10.29,-0.55,0.15,2.84,1,0.01,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","CTTTATATAAGAAAAC",9,1.51,NA,NA,NA,NA,NA,NA,"stop","S43* R124L P149K T201P",4
"lib2","SARS-CoV-2","CTTTATATATCCTATT",5,8.28,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R27S L60W K114E K132V L183T",5
"lib2","SARS-CoV-2","CTTTATATGCTATCCT",1,53.78,10.83,-0.01,0.04,3,1.03,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","CTTTATATTTGGTGGG",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L Y35T A42H F99R T148Y",5
"lib2","SARS-CoV-2","CTTTATCAAGATATGA",14,188.45,10.47,-0.37,0.04,2.93,1.04,0,">1 nonsynonymous","G83S E141V",2
"lib2","SARS-CoV-2","CTTTATCTACGTTAGA",7,91.13,9.58,-1.26,0.04,2.95,1.07,0,"1 nonsynonymous","N171L",1
"lib2","SARS-CoV-2","CTTTATCTGTCCGTTA",1,13.59,10.28,-0.56,0.1,2.82,1,0.01,">1 nonsynonymous","F44V L60K A190K",3
"lib2","SARS-CoV-2","CTTTATGAAGATAAAT",5,89.98,8.38,-2.45,0.08,2,1.08,0,">1 nonsynonymous","G83H T85C N118F",3
"lib2","SARS-CoV-2","CTTTATGAATTACAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27I Q79L D112E G166A F185*",5
"lib2","SARS-CoV-2","CTTTATGGACTTTCAA",8,15.57,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P54R V77R V103K S147I P197C",5
"lib2","SARS-CoV-2","CTTTATGTGATACCGT",7,221.72,10.92,0.09,0.04,2.95,1.06,0,">1 nonsynonymous","G51N T85R S184T",3
"lib2","SARS-CoV-2","CTTTATTATCCACCAT",8,225.56,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C150S Y175S",2
"lib2","SARS-CoV-2","CTTTATTCACGCTTAC",12,215.21,10.82,-0.01,0.04,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTTATTTACTCTACA",2,39.38,9.09,-1.74,0.08,2.87,1.12,0,">1 nonsynonymous","L95T L125S",2
"lib2","SARS-CoV-2","CTTTATTTCATGTGCC",7,147.45,10.81,-0.03,0.03,2.93,1.09,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","CTTTCAACCTGCTGGC",2,12.5,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C6L K48L L95C",3
"lib2","SARS-CoV-2","CTTTCAACGAGAGAAA",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N D68T I104G N171L",4
"lib2","SARS-CoV-2","CTTTCAACGGAAATAA",5,88.06,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","C31P I88G I142L",3
"lib2","SARS-CoV-2","CTTTCAATATCATCTG",3,41.75,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T46R Y50P Q168R",3
"lib2","SARS-CoV-2","CTTTCAATCTCATACC",4,6.17,9.66,-1.18,0.24,2.6,1.08,0.04,">1 nonsynonymous","T3P A14T A42I C49T K56S D112V",6
"lib2","SARS-CoV-2","CTTTCACAACTAAACT",1,32.12,10.96,0.12,0.07,2.94,1.07,0,">1 nonsynonymous","V173I T201L",2
"lib2","SARS-CoV-2","CTTTCACAATTCTAGA",1,9.14,10.97,0.13,0.08,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTCACACATAAGCA",3,29.37,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N4I T46S Y66G E135K",4
"lib2","SARS-CoV-2","CTTTCACAGACACAAA",2,15.26,10.46,-0.38,0.07,2.93,1.03,0,">1 nonsynonymous","F47V L60R S129K G155S P197L",5
"lib2","SARS-CoV-2","CTTTCACAGAGGCCTA",7,114.11,8.24,-2.6,0.09,2.16,1.1,0,">1 nonsynonymous","C6S A22E V52M Y119D",4
"lib2","SARS-CoV-2","CTTTCACATGTGCCTA",10,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47G C102E Y123M",3
"lib2","SARS-CoV-2","CTTTCACATTCACCGC",2,31.14,10.23,-0.61,0.08,2.85,1.04,0,"1 nonsynonymous","K56P",1
"lib2","SARS-CoV-2","CTTTCACATTTCTTAC",2,24.13,6,-4.84,1.22,3,1.16,0.01,">1 nonsynonymous","S113Y R136H",2
"lib2","SARS-CoV-2","CTTTCACCAAAACGCT",3,16.34,8.28,-2.56,0.14,2.82,1.04,0.01,">1 nonsynonymous","T3F G117W",2
"lib2","SARS-CoV-2","CTTTCACGACAATCAA",1,19.8,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6S V11S R136E",3
"lib2","SARS-CoV-2","CTTTCAGACAAACTTA",3,56.33,6.49,-4.34,0.66,1.5,1.22,0.04,">1 nonsynonymous","C6G V37A L95R",3
"lib2","SARS-CoV-2","CTTTCAGGGTGTGCGG",16,245.58,8.25,-2.58,0.12,2.2,1.07,0.01,">1 nonsynonymous","G83W D98S G166T",3
"lib2","SARS-CoV-2","CTTTCAGTATAATGGC",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T P54G L95V Q144P R179M",5
"lib2","SARS-CoV-2","CTTTCATAAAAGATCT",9,36.63,9.85,-0.99,0.1,2.17,1.08,0,">1 nonsynonymous","D75W G116R",2
"lib2","SARS-CoV-2","CTTTCATACAAAGAGT",4,27.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42V I72S S164P",3
"lib2","SARS-CoV-2","CTTTCATTAAAGCGCT",9,135.32,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G86L D97T T140S G174E",4
"lib2","SARS-CoV-2","CTTTCCAAAATTGAAT",6,49.75,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F70S L131A I142R",3
"lib2","SARS-CoV-2","CTTTCCAAGTCCGGGG",4,76.78,10.73,-0.11,0.04,2.91,1.08,0,"1 nonsynonymous","V32N",1
"lib2","SARS-CoV-2","CTTTCCACCGGGGTAA",2,15.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22V S36V E135R",3
"lib2","SARS-CoV-2","CTTTCCACTAAAGTCG",4,36.91,10.03,-0.81,0.13,2.65,1.11,0.01,">1 nonsynonymous","N58Y D90K",2
"lib2","SARS-CoV-2","CTTTCCATAAAAAAAC",3,27.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93T C150Y",2
"lib2","SARS-CoV-2","CTTTCCCATAGCTCAC",8,261.86,10.48,-0.36,0.03,2.93,1.05,0,">1 nonsynonymous","N58A T63K",2
"lib2","SARS-CoV-2","CTTTCCCCAGCCAAGA",5,51.04,10.23,-0.6,0.05,2.96,1,0,">1 nonsynonymous","Y39S D98A P149V",3
"lib2","SARS-CoV-2","CTTTCCGAAACTTACC",2,36.62,6.22,-4.61,0.26,1.51,1.07,0,">1 nonsynonymous","Y21L C31L C49K A190F",4
"lib2","SARS-CoV-2","CTTTCCGCCCACATCG",10,158.37,8.41,-2.42,0.09,1.96,1.07,0,">1 nonsynonymous","A18K V52M L60N G146T",4
"lib2","SARS-CoV-2","CTTTCCGGACACGATT",2,26.14,7.98,-2.85,0.28,1.5,1.09,0.02,">1 nonsynonymous","D112L G155E",2
"lib2","SARS-CoV-2","CTTTCCTACTATCTTG",4,30.95,9.6,-1.24,0.09,2.57,1.03,0,">1 nonsynonymous","V11Y N130Y G146A",3
"lib2","SARS-CoV-2","CTTTCCTATTATAAAG",2,0.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S53Q",1
"lib2","SARS-CoV-2","CTTTCCTTGGCAACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20D C61I Y143C",3
"lib2","SARS-CoV-2","CTTTCCTTTACTGCCT",6,66.29,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C150P G155T T170K Q176T",4
"lib2","SARS-CoV-2","CTTTCGAAAGTAGTAA",6,20.28,6.84,-4,0.33,1.5,1.08,0.03,">1 nonsynonymous","A105Y R127N H189N",3
"lib2","SARS-CoV-2","CTTTCGAATAGCCAAC",13,103.29,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K87T N118P F167R",3
"lib2","SARS-CoV-2","CTTTCGACACAGATCC",6,83.06,9.1,-1.74,0.19,1.5,1.02,0.02,">1 nonsynonymous","L38F P82K",2
"lib2","SARS-CoV-2","CTTTCGACTGGGACGG",1,10.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5T V52P G74N D98Y Y119V",5
"lib2","SARS-CoV-2","CTTTCGAGCATTCGTT",3,35.23,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","V71M N107A E154K K199I",4
"lib2","SARS-CoV-2","CTTTCGCACCCGCTCT",1,15.19,6,-4.84,1.95,1.5,1.2,0.04,">1 nonsynonymous","P133S C158N",2
"lib2","SARS-CoV-2","CTTTCGCCACAGAACC",2,40.93,10.01,-0.83,0.06,2.82,1,0,">1 nonsynonymous","S41G A89C",2
"lib2","SARS-CoV-2","CTTTCGGGTCATGTAA",7,0.12,NA,NA,NA,NA,NA,NA,"stop","V103N A145S F156*",3
"lib2","SARS-CoV-2","CTTTCGGTTGCAGTTA",16,44.71,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","L5M V77E V103T",3
"lib2","SARS-CoV-2","CTTTCGTAATCAGACT",5,121.08,10.68,-0.16,0.03,2.98,1.03,0,">1 nonsynonymous","F62W D98F",2
"lib2","SARS-CoV-2","CTTTCGTGAATACCAC",8,131.93,10.7,-0.14,0.03,2.95,1.07,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","CTTTCGTGTGAATGAA",9,64.75,7.6,-3.23,0.15,1.64,1.13,0.01,">1 nonsynonymous","T3N C158N",2
"lib2","SARS-CoV-2","CTTTCTAACTACGCTA",6,18.29,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","P82F E135N V153H",3
"lib2","SARS-CoV-2","CTTTCTAATTCTACAT",5,80.45,8.07,-2.77,0.2,1.55,1.09,0.01,">1 nonsynonymous","V37C W106V Y119S",3
"lib2","SARS-CoV-2","CTTTCTACAGCCTCGA",7,34.44,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","G9D V20W P149M V153E V173E",5
"lib2","SARS-CoV-2","CTTTCTACCCGGGTAT",3,77.39,8.6,-2.23,0.07,2.98,1.1,0,">1 nonsynonymous","G9D R73Y",2
"lib2","SARS-CoV-2","CTTTCTAGACCCATTA",3,39.61,6,-4.84,0.96,3,1.08,0,">1 nonsynonymous","E10A D34T K114T F167N",4
"lib2","SARS-CoV-2","CTTTCTCCATCCTATA",4,46.83,10.19,-0.64,0.06,2.9,1.06,0,">1 nonsynonymous","F44A C61P",2
"lib2","SARS-CoV-2","CTTTCTCCGTTCGTCC",2,0,NA,NA,NA,NA,NA,NA,"stop","N107S T140* L162K",3
"lib2","SARS-CoV-2","CTTTCTCGAATTAGGA",1,6.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51P V65A",2
"lib2","SARS-CoV-2","CTTTCTCGATAACCTA",2,5.31,10.58,-0.26,0.27,2.84,1,0.02,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","CTTTCTCGGAGGGAAT",3,37.73,10.27,-0.56,0.09,2.6,1,0,">1 nonsynonymous","L38F G83T",2
"lib2","SARS-CoV-2","CTTTCTGAGCAATCAA",5,34.87,6,-4.84,0.3,3,1.13,0,">1 nonsynonymous","A33V N64V P96T W106G S200N",5
"lib2","SARS-CoV-2","CTTTCTGAGTAGTGAT",2,54.04,9.99,-0.85,0.1,2.32,1.03,0,"1 nonsynonymous","G51F",1
"lib2","SARS-CoV-2","CTTTCTGGCATAGCAG",2,142.15,10.9,0.06,0.04,2.98,1.04,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","CTTTCTTAGCTAAAAT",4,39.34,6,-4.84,1.59,3,1.11,0,">1 nonsynonymous","V37L F70D F99A G146E F167T",5
"lib2","SARS-CoV-2","CTTTCTTGAAACCACA",1,51.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8D I28S C61V I72S K87G L95R",6
"lib2","SARS-CoV-2","CTTTCTTTGATGTCTG",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L V115M R179S L183R",4
"lib2","SARS-CoV-2","CTTTGAAAAGCCGGCG",4,55.36,10.52,-0.31,0.04,2.98,1.05,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","CTTTGAAAGAACAAAT",6,53.67,9.74,-1.09,0.11,2.26,1.11,0.01,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","CTTTGAAATCCGTTGG",1,9.73,10.79,-0.05,0.1,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTGAACATTTTAGT",10,45.23,6.41,-4.42,0.45,1.5,1.22,0.02,">1 nonsynonymous","L5W R27L L131S Q168N",4
"lib2","SARS-CoV-2","CTTTGAACCTTCCGCA",4,2.47,NA,NA,NA,NA,NA,NA,"stop","S19* I28W G146V Q168L",4
"lib2","SARS-CoV-2","CTTTGAACGCAGAATC",3,53.42,10.32,-0.51,0.05,3,1.02,0,">1 nonsynonymous","K48E D98L",2
"lib2","SARS-CoV-2","CTTTGAAGAATCTCAC",2,9.81,10.66,-0.18,0.08,3,1.02,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","CTTTGAAGTTCATACG",7,53.44,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K26S Y159N Y178R K198C",4
"lib2","SARS-CoV-2","CTTTGAATAAAAATCT",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L D34H P54N N107Y D137V",5
"lib2","SARS-CoV-2","CTTTGAATTTAAAGTC",2,4.16,NA,NA,NA,NA,NA,NA,"stop","V77* I88F",2
"lib2","SARS-CoV-2","CTTTGACATAGTTCTA",1,10.24,10.75,-0.09,0.07,2.98,1.07,0,"1 nonsynonymous","P197G",1
"lib2","SARS-CoV-2","CTTTGACGGACTCGAG",3,18.98,6.75,-4.09,0.49,1.5,1.28,0.04,">1 nonsynonymous","C6F V77E S139A S200P",4
"lib2","SARS-CoV-2","CTTTGACGTCAGCGGA",10,119.09,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G51V Y66S I88D F156M",4
"lib2","SARS-CoV-2","CTTTGACTTAGACGTT",9,102.84,8.66,-2.18,0.14,1.5,1.08,0.01,">1 nonsynonymous","N24W F44E",2
"lib2","SARS-CoV-2","CTTTGAGCGTATGACC",1,25.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44L L57R E76R K94F",4
"lib2","SARS-CoV-2","CTTTGATAAATCAATT",8,2.53,NA,NA,NA,NA,NA,NA,"stop","I2C F47Y Y123*",3
"lib2","SARS-CoV-2","CTTTGATAATGCGGAT",6,77.64,10.66,-0.17,0.04,2.92,1.04,0,">1 nonsynonymous","T85F T201V",2
"lib2","SARS-CoV-2","CTTTGATAATTCTAAA",16,1.8,NA,NA,NA,NA,NA,NA,"stop","S43* G146A F167P",3
"lib2","SARS-CoV-2","CTTTGATCAATGCCAT",17,372.82,8.93,-1.91,0.05,2.93,1.11,0,">1 nonsynonymous","Y119M G174A T201L",3
"lib2","SARS-CoV-2","CTTTGATCACATACAC",8,24.49,6,-4.84,2,1.5,1.1,0.07,">1 nonsynonymous","E76G D90T F134R P161E T201C",5
"lib2","SARS-CoV-2","CTTTGATGGTCCTTTA",2,20.34,6.36,-4.48,0.27,2.86,1.13,0.01,">1 nonsynonymous","A14F P133F P161D",3
"lib2","SARS-CoV-2","CTTTGATGTAGACAAG",1,17.49,10.1,-0.73,0.15,2.9,1,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","CTTTGATTCTAAATAA",5,116.98,10.81,-0.03,0.03,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","CTTTGCAACACCACAG",8,55.29,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N40G F62E P133F C158G",4
"lib2","SARS-CoV-2","CTTTGCACACAACTAG",7,61.3,10.63,-0.21,0.02,2.89,1.09,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","CTTTGCACGTGCCCCT",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A Y178R",2
"lib2","SARS-CoV-2","CTTTGCATGGACAAAA",2,14.43,8.57,-2.27,0.35,1.5,1,0.07,">1 nonsynonymous","R27K S69K G83W",3
"lib2","SARS-CoV-2","CTTTGCCAAACGATCA",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M L57S T85N P96E T148R",5
"lib2","SARS-CoV-2","CTTTGCCCTACCCGAA",1,5.73,NA,NA,NA,NA,NA,NA,"stop","D90T V103* K114M",3
"lib2","SARS-CoV-2","CTTTGCCGTGATTGCC",1,16.13,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","F134I P177Y",2
"lib2","SARS-CoV-2","CTTTGCCTATAGCTCT",3,106.56,6.23,-4.6,0.5,1.5,1.17,0.01,">1 nonsynonymous","S29V L60T V103T G146S",4
"lib2","SARS-CoV-2","CTTTGCGATGCCAATT",6,27.42,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","S19A L60Q D98K W106L N157I K198S",6
"lib2","SARS-CoV-2","CTTTGCGCATAATAGT",10,144.57,6,-4.84,1.15,1.5,1.16,0.01,">1 nonsynonymous","S36L S45I N118M K198G",4
"lib2","SARS-CoV-2","CTTTGCTACGTGGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","D90Y Y119* C150M K198Q",4
"lib2","SARS-CoV-2","CTTTGCTGAGTACCAT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L L60R G74R D98A T201F",5
"lib2","SARS-CoV-2","CTTTGCTGCAAGCGCC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","A33* V173L G196R",3
"lib2","SARS-CoV-2","CTTTGCTTGAGACTTA",4,117.39,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A42T L57G Y119V S139F",4
"lib2","SARS-CoV-2","CTTTGGACACTCGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* I88F",2
"lib2","SARS-CoV-2","CTTTGGACGTGGGCCG",4,49.24,10.91,0.07,0.04,3,1,0,"1 nonsynonymous","Y39H",1
"lib2","SARS-CoV-2","CTTTGGAGTCCTCGCT",3,25.84,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C49L I142Q",2
"lib2","SARS-CoV-2","CTTTGGATGAAATAAC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","G9* W106F G172Y",3
"lib2","SARS-CoV-2","CTTTGGATTACAGACC",1,37.84,10.72,-0.11,0.08,2.91,1.05,0,">1 nonsynonymous","G83L N171T V173A",3
"lib2","SARS-CoV-2","CTTTGGCAAATCTTGG",3,2.98,NA,NA,NA,NA,NA,NA,"stop","N1R T63P T201*",3
"lib2","SARS-CoV-2","CTTTGGCACTATCAGC",13,185.09,9.12,-1.71,0.06,1.92,1.1,0,">1 nonsynonymous","S36H Y121R",2
"lib2","SARS-CoV-2","CTTTGGCTCTTCACAT",4,308.28,10.72,-0.12,0.04,2.95,1.06,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","CTTTGGTATCGAGTGG",4,0.17,NA,NA,NA,NA,NA,NA,"stop","L5V N40Y I104M Q144* E154L",5
"lib2","SARS-CoV-2","CTTTGTAAAAAAGTGA",6,127.49,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A18P I104K L125A Y178K A192P",5
"lib2","SARS-CoV-2","CTTTGTAAAAGCACGC",11,57.26,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F70G D98E N107Y K132F",4
"lib2","SARS-CoV-2","CTTTGTAAAGAGTCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T I72F P96K",3
"lib2","SARS-CoV-2","CTTTGTAAATATATTC",9,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W A67T D112A V182D",4
"lib2","SARS-CoV-2","CTTTGTAAATGGTAGG",5,32.65,10.83,0,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTGTACGTTTATGC",1,26.61,10.86,0.03,0.07,3,1.04,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","CTTTGTATTGACGATA",6,64.21,9.71,-1.12,0.07,2.39,1.01,0,">1 nonsynonymous","A22T A42F S129L",3
"lib2","SARS-CoV-2","CTTTGTCCGTTGAAAC",4,29.7,8.68,-2.15,0.08,2.49,1.05,0,">1 nonsynonymous","K94N N120T",2
"lib2","SARS-CoV-2","CTTTGTGAGAAGGACG",14,224.34,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19Y G51P N58A",3
"lib2","SARS-CoV-2","CTTTGTGCGTGTTTGT",2,6.76,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L5E G86S A105N I138P",4
"lib2","SARS-CoV-2","CTTTGTGCGTTGAACG",3,5.73,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A33K T100V",2
"lib2","SARS-CoV-2","CTTTGTTACTTGCGAC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","D34I T148S P161V G172*",4
"lib2","SARS-CoV-2","CTTTGTTCGCAGTAAG",3,15.34,6.87,-3.97,0.34,1.5,1.12,0.03,">1 nonsynonymous","V71E K199Y",2
"lib2","SARS-CoV-2","CTTTGTTTGGTTCCGT",1,25.95,9.75,-1.09,0.1,2.35,1.02,0,">1 nonsynonymous","T3C T15G K114Q",3
"lib2","SARS-CoV-2","CTTTGTTTTAACGGTT",8,22.18,6,-4.84,2,2.33,1.12,0,">1 nonsynonymous","G83T V103N K114L",3
"lib2","SARS-CoV-2","CTTTTAAAAAGGCTTA",3,31.64,7.99,-2.85,0.28,1.5,1.16,0.02,">1 nonsynonymous","D68E P149A",2
"lib2","SARS-CoV-2","CTTTTAAAAGTTATGG",4,56.52,8.77,-2.07,0.09,2.86,1.13,0,"1 nonsynonymous","L125E",1
"lib2","SARS-CoV-2","CTTTTAAACAAAACTA",1,39.11,10.81,-0.03,0.07,2.87,1.12,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","CTTTTAAACCCGGAGG",5,12.97,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","P82H A89V T170S Y175S",4
"lib2","SARS-CoV-2","CTTTTAAACTGAAGGA",3,32.7,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9V W23I A42G I142G S184K",5
"lib2","SARS-CoV-2","CTTTTAAATAATTAGA",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50V F126I",2
"lib2","SARS-CoV-2","CTTTTAACCACCGTCA",3,64.91,10.8,-0.03,0.06,2.91,1.11,0,">1 nonsynonymous","I2F Q163S L187M",3
"lib2","SARS-CoV-2","CTTTTAAGGTTGATCG",10,104.59,7,-3.83,0.15,1.5,1.12,0,">1 nonsynonymous","S41M L122G C150V",3
"lib2","SARS-CoV-2","CTTTTAATTGGTTGAC",8,10.6,6.76,-4.07,0.5,2.62,1.27,0.02,">1 nonsynonymous","C6R N13F I28G C61S",4
"lib2","SARS-CoV-2","CTTTTACAGCACGTAA",2,10.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","W106G Q144H G152A C158R",4
"lib2","SARS-CoV-2","CTTTTACATAAAGATA",5,5.5,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F12N D98V D112S",3
"lib2","SARS-CoV-2","CTTTTACCTTAACAGA",3,86.15,10.99,0.16,0.06,2.94,1.07,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","CTTTTACGACAACACA",4,52.19,9.74,-1.09,0.06,2.85,1.05,0,">1 nonsynonymous","K48S Y143L",2
"lib2","SARS-CoV-2","CTTTTACGCTAGCTAC",2,56.99,10.43,-0.41,0.07,2.97,1.02,0,">1 nonsynonymous","T55L D98L F160Q",3
"lib2","SARS-CoV-2","CTTTTACGTCACAACT",7,377.48,9.92,-0.92,0.04,2.8,1.05,0,">1 nonsynonymous","N40R Q176M",2
"lib2","SARS-CoV-2","CTTTTACGTTGATCCC",3,19.97,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L60F L95T A105T Q144S S200I",5
"lib2","SARS-CoV-2","CTTTTACTAGAGGGGC",1,8.72,6,-4.84,2,3,1.11,0.02,">1 nonsynonymous","F99N R127V",2
"lib2","SARS-CoV-2","CTTTTAGAAGAATCAA",2,53.88,8.69,-2.15,0.14,2.32,1.1,0.01,"1 nonsynonymous","N107H",1
"lib2","SARS-CoV-2","CTTTTAGACAGTAATA",5,2.16,NA,NA,NA,NA,NA,NA,"stop","C6R V77F R127N Q144* E154P T170I",6
"lib2","SARS-CoV-2","CTTTTAGTTTAAAGAC",3,42.91,10.92,0.09,0.09,2.8,1.23,0,"1 nonsynonymous","T3Q",1
"lib2","SARS-CoV-2","CTTTTATAATGGCGTA",8,40.6,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","A14K R27S F99D K128T P149R",5
"lib2","SARS-CoV-2","CTTTTATACAAAGACT",2,23.92,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T3S A89L Y119S",3
"lib2","SARS-CoV-2","CTTTTATATCCTAATT",3,1.25,NA,NA,NA,NA,NA,NA,"stop","N4K G116* Y119G",3
"lib2","SARS-CoV-2","CTTTTATATTAATACT",15,200.94,10.82,-0.01,0.03,2.97,1.04,0,"1 nonsynonymous","K199W",1
"lib2","SARS-CoV-2","CTTTTATGCTCCCGGG",1,20.98,10.16,-0.67,0.07,2.91,1.12,0,">1 nonsynonymous","P7L G166N V173R",3
"lib2","SARS-CoV-2","CTTTTCAAACGCCATG",1,8.29,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10D D34V Q176C",3
"lib2","SARS-CoV-2","CTTTTCAATTCGGTCG",1,19.76,10.74,-0.1,0.06,2.6,1.42,0,">1 nonsynonymous","N4G R16V",2
"lib2","SARS-CoV-2","CTTTTCACACCGAAAG",1,22.4,8.4,-2.44,0.12,1.87,1.18,0.01,">1 nonsynonymous","C6L K128T I138C T148I V153L",5
"lib2","SARS-CoV-2","CTTTTCAGGCAGACAG",2,20.64,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42D N92M F134T",3
"lib2","SARS-CoV-2","CTTTTCATACCAAGCT",1,128.6,8.73,-2.1,0.09,3,1.08,0,">1 nonsynonymous","K26R N171R",2
"lib2","SARS-CoV-2","CTTTTCATATCAGGTT",5,59.23,10.78,-0.05,0.05,2.92,1.08,0,"1 nonsynonymous","N58G",1
"lib2","SARS-CoV-2","CTTTTCATGTCGAACG",1,4.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N151S",1
"lib2","SARS-CoV-2","CTTTTCCAACACGCTG",2,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S K56L I104D Y175D",4
"lib2","SARS-CoV-2","CTTTTCCAGAGTCTTG",3,30.38,10.49,-0.34,0.06,2.98,1.02,0,">1 nonsynonymous","G51R A81Q",2
"lib2","SARS-CoV-2","CTTTTCCCAGTTATGA",9,23.71,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2L K56D D90H L183Y",4
"lib2","SARS-CoV-2","CTTTTCCTAGCCCTGG",2,6.09,8.5,-2.34,0.27,1.78,1.08,0.02,">1 nonsynonymous","S113Y P149L",2
"lib2","SARS-CoV-2","CTTTTCGTCGAATTTG",4,6.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3G E10Y Q79T C158R T201K",5
"lib2","SARS-CoV-2","CTTTTCGTTCAACACA",16,126.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3R T46F R73C D112K N120A L187A",6
"lib2","SARS-CoV-2","CTTTTCTAATGTCAAG",8,23.28,6,-4.84,1.91,1.5,1.08,0.01,">1 nonsynonymous","V103T N157F A192P",3
"lib2","SARS-CoV-2","CTTTTCTATGCCCAAG",9,154.26,7.87,-2.96,0.11,1.64,1.07,0.01,">1 nonsynonymous","D137Y F160E",2
"lib2","SARS-CoV-2","CTTTTCTCAACCCTCA",14,161.37,10.76,-0.08,0.04,2.81,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTTCTGAAATATAA",3,6.05,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L5P L38F V103T Y165E",4
"lib2","SARS-CoV-2","CTTTTCTGATTTAAAC",6,96.04,10.23,-0.61,0.05,3,1.02,0,">1 nonsynonymous","R27Q K56M F156L",3
"lib2","SARS-CoV-2","CTTTTCTTACCTCCCC",3,31.01,9.4,-1.44,0.07,2.9,1.09,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","CTTTTCTTCAATCCCC",3,121.88,10.98,0.14,0.06,2.95,1.08,0,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","CTTTTGAACGAACGGG",4,121.46,10.85,0.01,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTTGAATTTTTGAA",5,25.24,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","P149F R179T",2
"lib2","SARS-CoV-2","CTTTTGACATTAAACA",4,71.97,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A22V P54L S113F G152H",4
"lib2","SARS-CoV-2","CTTTTGACTTTAACTT",8,49.34,6.68,-4.15,0.52,1.54,1.28,0.04,">1 nonsynonymous","S19L A22S C61K V153E",4
"lib2","SARS-CoV-2","CTTTTGAGAATCCTGT",13,250.92,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D59S Q84S E141T G172N K198W",5
"lib2","SARS-CoV-2","CTTTTGCAAGAACTCA",1,3.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","CTTTTGCAATATGCAG",7,276.12,7.94,-2.89,0.11,2.05,1.1,0,">1 nonsynonymous","G152L Y175R",2
"lib2","SARS-CoV-2","CTTTTGCGAGTGAATA",8,60.95,6,-4.84,1.09,1.5,1.17,0.02,">1 nonsynonymous","I28V V77Y C102R Y165L",4
"lib2","SARS-CoV-2","CTTTTGCGCCAACGCT",5,107.71,10.6,-0.23,0.04,2.99,1.02,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","CTTTTGCGGTCCATAT",6,40.92,6,-4.84,1.26,1.83,1.15,0.01,">1 nonsynonymous","N4I Y21H D90I Y119S A145L P197A",6
"lib2","SARS-CoV-2","CTTTTGCGTGGAAGGG",5,4.6,NA,NA,NA,NA,NA,NA,"stop","C61M C102* R127V",3
"lib2","SARS-CoV-2","CTTTTGGAACAAAACA",7,170.21,10.75,-0.08,0.03,3,1.02,0,">1 nonsynonymous","Q84K F160Q",2
"lib2","SARS-CoV-2","CTTTTGGAACCACTGA",3,40.04,10.32,-0.52,0.05,2.95,1.06,0,">1 nonsynonymous","K87V K128A",2
"lib2","SARS-CoV-2","CTTTTGGTAACATCAC",1,17.65,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14I Q176G F185C",3
"lib2","SARS-CoV-2","CTTTTGGTATGGGCCT",7,17.64,8.78,-2.05,0.32,1.5,1.13,0.06,">1 nonsynonymous","C49I N64K",2
"lib2","SARS-CoV-2","CTTTTGTAAGTTCGGT",6,98.03,9.76,-1.07,0.09,2.01,1.05,0,">1 nonsynonymous","Y91L R136W",2
"lib2","SARS-CoV-2","CTTTTGTATTAACAAT",1,13.12,10.88,0.04,0.1,3,1.02,0,">1 nonsynonymous","I2T N24Q",2
"lib2","SARS-CoV-2","CTTTTGTCCAATATAT",1,7.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13Y N64H Y121I P149M",4
"lib2","SARS-CoV-2","CTTTTGTGTTGAGTGG",1,64.55,10.41,-0.43,0.06,2.84,1,0,">1 nonsynonymous","D97F K128L",2
"lib2","SARS-CoV-2","CTTTTGTTACATGACC",1,25.49,10.69,-0.14,0.05,2.97,1.08,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","CTTTTTAACACATATT",3,9,6.22,-4.62,0.78,2.04,1.07,0.04,">1 nonsynonymous","D34S I104C G117I Y123G E141T",5
"lib2","SARS-CoV-2","CTTTTTACACTCTCTA",1,25.06,10.83,-0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTTTAGGCTGCTAG",2,8.98,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C61G D68M D90P C102N K114R",5
"lib2","SARS-CoV-2","CTTTTTATAGCATGAC",5,90.95,8.82,-2.01,0.07,1.98,1.12,0,">1 nonsynonymous","L5R G51V P169H",3
"lib2","SARS-CoV-2","CTTTTTCAAAAGCAAG",2,111.88,10.78,-0.06,0.05,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","CTTTTTCCACTTAATT",3,0.33,NA,NA,NA,NA,NA,NA,"stop","L5I Y35F P96* K132S Q144L",5
"lib2","SARS-CoV-2","CTTTTTCCCAATTTCA",7,57.9,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99V W106M",2
"lib2","SARS-CoV-2","CTTTTTGAAAATAACT",3,62.07,10.5,-0.34,0.04,2.89,1.13,0,">1 nonsynonymous","A22H F160P",2
"lib2","SARS-CoV-2","CTTTTTGAAAGAGGAA",7,78.75,9.23,-1.61,0.12,1.72,1.13,0.01,">1 nonsynonymous","I2V A105L",2
"lib2","SARS-CoV-2","CTTTTTGCCGTATGAG",3,0.53,NA,NA,NA,NA,NA,NA,"stop","L5I D59S D97* Y143N F160L P161G",6
"lib2","SARS-CoV-2","CTTTTTGGAGGTCTAA",6,42.46,6.19,-4.65,1,1.5,1.22,0.05,">1 nonsynonymous","D90M R179W",2
"lib2","SARS-CoV-2","CTTTTTGTATGCTAAC",3,0.6,NA,NA,NA,NA,NA,NA,"stop","A14F D98Q L122A N157T T201*",5
"lib2","SARS-CoV-2","CTTTTTTAGCGCAATA",6,50.66,8.79,-2.04,0.35,1.5,1,0.06,">1 nonsynonymous","G9L G83W D97A D112R G146W",5
"lib2","SARS-CoV-2","CTTTTTTGTTATCCGG",4,42.61,10.85,0.01,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAAAAAACCAAAC",1,19.72,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","A18T R124D R136W",3
"lib2","SARS-CoV-2","GAAAAAAAACGATTAA",11,63.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90F D97N W106V",3
"lib2","SARS-CoV-2","GAAAAAAAAGACAGGA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","I2C A42D G51S Q84Y N107F Y121P F134*",7
"lib2","SARS-CoV-2","GAAAAAAAAGTGCTAT",5,52.88,9.28,-1.55,0.05,2.84,1,0,">1 nonsynonymous","C6D G174W",2
"lib2","SARS-CoV-2","GAAAAAAAATAATCAA",2,55.72,10.3,-0.54,0.07,2.66,1.07,0,">1 nonsynonymous","A18T D97R E141T",3
"lib2","SARS-CoV-2","GAAAAAAAATAATTTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A192Q",1
"lib2","SARS-CoV-2","GAAAAAAAATTTCATG",1,18.81,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","S36L C61V V103P",3
"lib2","SARS-CoV-2","GAAAAAAACAACGACA",2,1.14,NA,NA,NA,NA,NA,NA,"stop","N64F E76N N92* D98S",4
"lib2","SARS-CoV-2","GAAAAAAACCGGGGCC",10,223.98,10.59,-0.24,0.02,2.97,1.03,0,">1 nonsynonymous","I2L S41C L60Q",3
"lib2","SARS-CoV-2","GAAAAAAACGGACAGT",7,80.43,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V103D R124L",2
"lib2","SARS-CoV-2","GAAAAAAAGCCCTTTT",3,88.41,9.94,-0.9,0.09,2.46,1.03,0,">1 nonsynonymous","T55R V65F V71I T85A K114R L122A G174A K199V",8
"lib2","SARS-CoV-2","GAAAAAAAGCCTGACA",5,119.07,9.36,-1.47,0.08,1.93,1.08,0,">1 nonsynonymous","V11F N40V N64V",3
"lib2","SARS-CoV-2","GAAAAAAATAACATCG",20,101.08,8.48,-2.36,0.09,1.88,1.13,0,">1 nonsynonymous","A14N R78S A105G G116A T140S S184H",6
"lib2","SARS-CoV-2","GAAAAAAATGAGTTAA",9,82.5,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10D A81C P96C L131K",4
"lib2","SARS-CoV-2","GAAAAAACAAAAATAT",10,46.95,6,-4.84,2,3,1.26,0,">1 nonsynonymous","F99V I104E",2
"lib2","SARS-CoV-2","GAAAAAACATGGTGAA",3,0.48,NA,NA,NA,NA,NA,NA,"stop","V103E N107T K114* D137L",4
"lib2","SARS-CoV-2","GAAAAAACCGAATCCC",1,142.99,9.93,-0.91,0.07,2.2,1.03,0,">1 nonsynonymous","Y50R L122S K198R",3
"lib2","SARS-CoV-2","GAAAAAACGACTATAT",4,18.34,6.62,-4.22,0.61,1.5,1.18,0.06,">1 nonsynonymous","T15P N24T A33K K94V Q168A",5
"lib2","SARS-CoV-2","GAAAAAACTCATCATT",3,0.76,NA,NA,NA,NA,NA,NA,"stop","N64K F134* A145S",3
"lib2","SARS-CoV-2","GAAAAAACTTACAAGT",2,20.3,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6Y N64D T85S W106C C158M",5
"lib2","SARS-CoV-2","GAAAAAACTTAGCCAC",1,73.02,10.93,0.09,0.07,2.84,1.17,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","GAAAAAAGAATTTCGC",4,31.49,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A42R K128Y R136T V153P P169A A190P",6
"lib2","SARS-CoV-2","GAAAAAAGACAAAAAT",8,51.17,6,-4.84,2,1.5,1.39,0.03,">1 nonsynonymous","W106L P149A S164L",3
"lib2","SARS-CoV-2","GAAAAAAGTACTCCGG",5,15.93,7.81,-3.02,0.28,1.5,1.16,0.03,">1 nonsynonymous","N4F D137V",2
"lib2","SARS-CoV-2","GAAAAAAGTATAATTA",10,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F G83L S108P K132A",4
"lib2","SARS-CoV-2","GAAAAAAGTATTCTTA",9,3.78,NA,NA,NA,NA,NA,NA,"stop","G9K I28N D68V L95V W106P P177*",6
"lib2","SARS-CoV-2","GAAAAAATAATCTATA",5,67.6,10.26,-0.58,0.07,2.69,1.01,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","GAAAAAATAATCTATC",13,111.27,10.83,0,0.05,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAAATAGTAAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C A89E C158W",3
"lib2","SARS-CoV-2","GAAAAAATCAATGAAC",1,0.86,NA,NA,NA,NA,NA,NA,"stop","C61N G152* Y175G",3
"lib2","SARS-CoV-2","GAAAAAATCTCCACTT",3,116.12,10.66,-0.17,0.05,2.91,1.1,0,"1 nonsynonymous","N109A",1
"lib2","SARS-CoV-2","GAAAAAATGTTGCTAA",7,48.14,9.54,-1.3,0.19,1.99,1.08,0.01,">1 nonsynonymous","N13V C61I",2
"lib2","SARS-CoV-2","GAAAAAATTAGGGCGC",2,119.76,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L38Y D137L",2
"lib2","SARS-CoV-2","GAAAAAATTATAGATG",5,29.99,6,-4.83,0.41,2.27,1.09,0,">1 nonsynonymous","D68W D90P D98E W106S Q176F",5
"lib2","SARS-CoV-2","GAAAAAATTATTTAGC",4,25.26,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","R25L S29M L60W",3
"lib2","SARS-CoV-2","GAAAAACAAACTACCC",3,66.55,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L57W P82T G101D L122R Y175W",5
"lib2","SARS-CoV-2","GAAAAACACGAATCAC",1,8.36,11.36,0.52,0.49,2.04,1,0.07,">1 nonsynonymous","V37F F44Q",2
"lib2","SARS-CoV-2","GAAAAACAGAGGCACT",1,60.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9V N40V I72L G152V T201L",5
"lib2","SARS-CoV-2","GAAAAACAGGATTTGC",1,50.85,10.17,-0.67,0.08,2.85,1.12,0,">1 nonsynonymous","T15N G174S",2
"lib2","SARS-CoV-2","GAAAAACAGGCCATAA",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144L N151T",2
"lib2","SARS-CoV-2","GAAAAACATACATAAA",7,125.96,10.77,-0.06,0.05,2.84,1.16,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","GAAAAACATACTAAAT",2,101.1,10.46,-0.37,0.07,2.72,1.03,0,">1 nonsynonymous","T15V A22R D59S",3
"lib2","SARS-CoV-2","GAAAAACATTTTCACT",2,76.8,10.75,-0.08,0.06,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAACCAGCATAAA",9,109.06,10.1,-0.74,0.07,2.66,1.08,0,">1 nonsynonymous","V37G F44H D98S",3
"lib2","SARS-CoV-2","GAAAAACCATATCTCG",1,8.16,9.89,-0.95,0.11,2.74,1.04,0.01,">1 nonsynonymous","N13T T85I",2
"lib2","SARS-CoV-2","GAAAAACCCGGCCGTT",6,139.63,10.68,-0.16,0.03,2.97,1.03,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","GAAAAACCCTTAGAGA",2,0.7,NA,NA,NA,NA,NA,NA,"stop","V37* V182Y",2
"lib2","SARS-CoV-2","GAAAAACCGATGATGC",2,37.78,9.55,-1.29,0.07,2.88,1.09,0,">1 nonsynonymous","Y143L L187P",2
"lib2","SARS-CoV-2","GAAAAACCGCGAAGCG",4,64.92,9.66,-1.18,0.06,1.99,1.02,0,">1 nonsynonymous","I2V Q84P",2
"lib2","SARS-CoV-2","GAAAAACCGTCCAAAA",2,19.42,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D137Y Y165L",2
"lib2","SARS-CoV-2","GAAAAACCTAAAATAC",2,27.46,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S43R G51F N58Y G101F",4
"lib2","SARS-CoV-2","GAAAAACGACCGTATT",23,4.04,NA,NA,NA,NA,NA,NA,"stop","L5H A33M Y39* N110*",4
"lib2","SARS-CoV-2","GAAAAACGGATACCAT",8,34.73,10.85,0.01,0.05,2.94,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAACGGGTGATTA",1,3.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","GAAAAACGTACACCTG",9,98.67,8.52,-2.31,0.08,1.8,1.1,0,">1 nonsynonymous","N110K N151K Y165M G174A L183F",5
"lib2","SARS-CoV-2","GAAAAACTAAGTGCGG",5,39.35,6.75,-4.09,0.2,1.7,1.15,0.01,">1 nonsynonymous","R27M C158E",2
"lib2","SARS-CoV-2","GAAAAACTACTAGCCA",2,22.42,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","I2V Y50C N64A Q84M Y119A I142H",6
"lib2","SARS-CoV-2","GAAAAACTCAAAATGA",1,5.4,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","L5A R136S T170N L183K",4
"lib2","SARS-CoV-2","GAAAAACTGACCACAC",2,43.96,10,-0.84,0.11,2.43,1.04,0.01,">1 nonsynonymous","R136S P149L",2
"lib2","SARS-CoV-2","GAAAAACTGTTAAGGA",12,85.15,9.4,-1.43,0.19,1.55,1.09,0.01,">1 nonsynonymous","K56Y W106S",2
"lib2","SARS-CoV-2","GAAAAACTTCTAGAAG",6,29.72,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G83V P96D N107T N118Q T201M",5
"lib2","SARS-CoV-2","GAAAAACTTGATGCCT",7,177.83,10.22,-0.61,0.03,2.79,1.01,0,">1 nonsynonymous","S41K D90T",2
"lib2","SARS-CoV-2","GAAAAAGAAAAGGTGT",3,15.72,10.69,-0.14,0.06,2.94,1.11,0,"1 nonsynonymous","L5W",1
"lib2","SARS-CoV-2","GAAAAAGAAAGATAGT",13,182.76,9.07,-1.77,0.07,2.43,1.06,0,">1 nonsynonymous","F44I L162M G174M",3
"lib2","SARS-CoV-2","GAAAAAGAATAATTCC",2,25.59,9.01,-1.83,0.14,2.32,1.12,0.01,">1 nonsynonymous","A33I K87R N107R E141G",4
"lib2","SARS-CoV-2","GAAAAAGAGCTTGGGG",3,22.68,6.44,-4.39,0.35,1.5,1.08,0.01,">1 nonsynonymous","V37D A81S G86Y V103E N109E",5
"lib2","SARS-CoV-2","GAAAAAGAGGACTAAT",4,63.92,10.56,-0.28,0.04,3,1.02,0,">1 nonsynonymous","T55L Q84K I138Q",3
"lib2","SARS-CoV-2","GAAAAAGATTAATCTG",5,60.59,9.83,-1.01,0.08,2.08,1.03,0,">1 nonsynonymous","T3I Y91S K198Q",3
"lib2","SARS-CoV-2","GAAAAAGATTAGCTAA",1,12.46,10.07,-0.76,0.22,2.68,1.09,0.02,">1 nonsynonymous","W106V A192T P197Y",3
"lib2","SARS-CoV-2","GAAAAAGCCAGGGTAT",3,59.21,9.21,-1.62,0.07,2.93,1.09,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","GAAAAAGCCTGCCTAG",7,96.21,10.07,-0.77,0.04,2.94,1.03,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","GAAAAAGCCTGCTCAA",16,3.22,NA,NA,NA,NA,NA,NA,"stop","Y39F R124D L131* G146A G152T",5
"lib2","SARS-CoV-2","GAAAAAGCGTTTTTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59G F134S P149* V173*",4
"lib2","SARS-CoV-2","GAAAAAGGCATGAAAA",4,79.89,10.28,-0.55,0.07,2.75,1,0,">1 nonsynonymous","E76F L188T",2
"lib2","SARS-CoV-2","GAAAAAGGGTAACAGT",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31M K56I L122K",3
"lib2","SARS-CoV-2","GAAAAAGGTCTTATGA",8,70.09,10.81,-0.03,0.06,2.97,1.02,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","GAAAAAGTAAATCGGT",5,154.25,10.68,-0.16,0.03,2.97,1.03,0,"1 nonsynonymous","Y178N",1
"lib2","SARS-CoV-2","GAAAAAGTCAAACAAA",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1C A33E P82Q T201E",4
"lib2","SARS-CoV-2","GAAAAAGTGGGTCTTC",13,117.65,10.56,-0.28,0.03,2.9,1.05,0,">1 nonsynonymous","N1H S41N F134A Q168S",4
"lib2","SARS-CoV-2","GAAAAAGTGTACACAC",8,138.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5D Y39S Q79A G101L K132S N171L",6
"lib2","SARS-CoV-2","GAAAAAGTTAACTGAA",3,31.67,6.08,-4.75,0.58,1.5,1.11,0.01,">1 nonsynonymous","Y123V C150L",2
"lib2","SARS-CoV-2","GAAAAATAAACAGCGA",1,9.98,6,-4.84,2,3,1.11,0.02,">1 nonsynonymous","N13P S36A G83V R127T Y159V",5
"lib2","SARS-CoV-2","GAAAAATAAACGGATC",3,44.07,6.29,-4.55,0.44,1.5,1.12,0.01,">1 nonsynonymous","D98E F167P",2
"lib2","SARS-CoV-2","GAAAAATAAACGGTAC",4,9.12,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K94T F99S V181Q",3
"lib2","SARS-CoV-2","GAAAAATAACATCACT",3,29.69,8.74,-2.09,0.17,1.5,1,0.01,"1 nonsynonymous","S19W",1
"lib2","SARS-CoV-2","GAAAAATAACATTTCT",2,50.45,9.94,-0.9,0.1,1.91,1.06,0,">1 nonsynonymous","R27M P82V",2
"lib2","SARS-CoV-2","GAAAAATAAGATGAAC",4,42.89,6.24,-4.59,0.91,1.5,1.2,0.03,">1 nonsynonymous","G51R P149I Y165Q",3
"lib2","SARS-CoV-2","GAAAAATAAGGGAACG",24,139.97,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N64E R124N",2
"lib2","SARS-CoV-2","GAAAAATACGGCAATA",9,4.9,NA,NA,NA,NA,NA,NA,"stop","A81* Y93G K114V",3
"lib2","SARS-CoV-2","GAAAAATACTCTTACG",1,10.91,6.16,-4.67,0.48,3,1.08,0,">1 nonsynonymous","W23E Y35P C158Y",3
"lib2","SARS-CoV-2","GAAAAATACTTATACA",4,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V K94G",2
"lib2","SARS-CoV-2","GAAAAATAGACAAAAC",4,21.03,10.87,0.04,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAATAGGCAACAC",7,103.55,7.72,-3.12,0.23,1.5,1.11,0.02,"1 nonsynonymous","D68I",1
"lib2","SARS-CoV-2","GAAAAATAGTGTAATA",1,13.36,10.2,-0.63,0.16,2.9,1.05,0,">1 nonsynonymous","G83S E154P K198N",3
"lib2","SARS-CoV-2","GAAAAATATAAATTCG",1,22.45,7.23,-3.6,0.46,1.5,1.17,0.04,">1 nonsynonymous","D68L Y93L N118Y",3
"lib2","SARS-CoV-2","GAAAAATATATACCGG",25,266.34,10.15,-0.69,0.06,2.45,1.01,0,"1 nonsynonymous","I80M",1
"lib2","SARS-CoV-2","GAAAAATATTTCATCC",5,53.28,6.08,-4.76,1,1.5,1.2,0.03,">1 nonsynonymous","G86F S200Y",2
"lib2","SARS-CoV-2","GAAAAATCAATTGGAC",9,1.15,NA,NA,NA,NA,NA,NA,"stop","K26W C49S C61* G166R",4
"lib2","SARS-CoV-2","GAAAAATCATAGAGAA",5,0.08,NA,NA,NA,NA,NA,NA,"stop","S45* Y123W C150R F156L",4
"lib2","SARS-CoV-2","GAAAAATCCCTACCAG",1,70.77,10.65,-0.19,0.04,2.89,1.11,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","GAAAAATCGCATCGAC",4,1.01,NA,NA,NA,NA,NA,NA,"stop","P7* P96H N120P G155W",4
"lib2","SARS-CoV-2","GAAAAATCTCCCCGTG",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y R179K T201M",3
"lib2","SARS-CoV-2","GAAAAATCTTTCTTTG",1,22.21,10.1,-0.73,0.07,2.83,1.08,0,">1 nonsynonymous","E10D N107A",2
"lib2","SARS-CoV-2","GAAAAATGAACCATTA",4,5.75,6.6,-4.24,0.91,3,1,0.02,">1 nonsynonymous","N13I V103R",2
"lib2","SARS-CoV-2","GAAAAATGGAGGTCAC",17,7.42,NA,NA,NA,NA,NA,NA,"stop","S36P D59L I104* Y178R",4
"lib2","SARS-CoV-2","GAAAAATGGCGATGAC",10,153.92,9.44,-1.39,0.08,1.94,1.06,0,">1 nonsynonymous","F8R V37K",2
"lib2","SARS-CoV-2","GAAAAATGTAGTGCTA",12,129.87,9.03,-1.81,0.04,2.16,1.04,0,">1 nonsynonymous","Y121V S139K",2
"lib2","SARS-CoV-2","GAAAAATTACGGTGAA",3,102.49,10.86,0.03,0.06,2.96,1.07,0,">1 nonsynonymous","G83M S147P",2
"lib2","SARS-CoV-2","GAAAAATTAGAGCAAA",6,62.1,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I72F N130R",2
"lib2","SARS-CoV-2","GAAAAATTCAGCATGG",4,55.23,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V32E F44S K56F C102R Y123G Q168L",6
"lib2","SARS-CoV-2","GAAAAATTGCATATCA",8,68.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A18V G83V D90I E154P",4
"lib2","SARS-CoV-2","GAAAAATTTAGTGCGC",3,25.66,7.44,-3.4,0.16,1.74,1.06,0.01,">1 nonsynonymous","C31S L38H Y119Q N130V",4
"lib2","SARS-CoV-2","GAAAAATTTCACCATA",4,26.9,7.32,-3.51,0.26,1.5,1.1,0.03,">1 nonsynonymous","R16V F99T L111I",3
"lib2","SARS-CoV-2","GAAAAATTTGCTACCC",3,42.63,9.23,-1.61,0.11,2.07,1.08,0,">1 nonsynonymous","F17L E154L",2
"lib2","SARS-CoV-2","GAAAACAAAATACACC",4,87.54,9.57,-1.27,0.08,2.43,1.07,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","GAAAACAAACAATCCT",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70Y K87Y D90E",3
"lib2","SARS-CoV-2","GAAAACAAATAAAGAT",1,23.49,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","K48N G51P Y91L T100L N107R S113V I142V",7
"lib2","SARS-CoV-2","GAAAACAAATTTCACC",5,30.45,10.76,-0.07,0.07,2.93,1.07,0,"1 nonsynonymous","R16L",1
"lib2","SARS-CoV-2","GAAAACAACAAACCAA",5,26.46,10.23,-0.61,0.05,2.97,1,0,">1 nonsynonymous","L5A L95M F156W",3
"lib2","SARS-CoV-2","GAAAACAACGCTTAAG",3,33.91,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G83D A89W K132L Y159G T201S",5
"lib2","SARS-CoV-2","GAAAACAACTCCCCAT",1,20.73,9.23,-1.61,0.07,1.94,1.03,0,">1 nonsynonymous","L57S G146H",2
"lib2","SARS-CoV-2","GAAAACAACTGTAAAA",19,142.83,9.47,-1.36,0.08,1.78,1.06,0,">1 nonsynonymous","T55L E76K S147R",3
"lib2","SARS-CoV-2","GAAAACAACTTTTCAC",6,42.15,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C61I V103Y G152H",3
"lib2","SARS-CoV-2","GAAAACAAGATAATTT",1,11.93,10.83,-0.01,0.08,2.87,1.11,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","GAAAACAAGCTAGATG",14,261.12,10.55,-0.29,0.03,2.94,1.06,0,">1 nonsynonymous","D90M I104L",2
"lib2","SARS-CoV-2","GAAAACAAGTTGAATA",2,24.94,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19M D112L",2
"lib2","SARS-CoV-2","GAAAACAATAACAGCA",8,114.9,10.58,-0.26,0.02,2.94,1.04,0,"1 nonsynonymous","F134E",1
"lib2","SARS-CoV-2","GAAAACAATCAGAGAG",1,140.56,10.91,0.07,0.04,2.92,1.08,0,">1 nonsynonymous","G9N T15S S45D T201G",4
"lib2","SARS-CoV-2","GAAAACAATGACAGTT",1,19.55,10.76,-0.08,0.06,3,1.04,0,"1 nonsynonymous","D75F",1
"lib2","SARS-CoV-2","GAAAACAATTCAGATG",4,38.58,10.84,0,0.07,2.91,1.08,0,">1 nonsynonymous","R16T L60Q",2
"lib2","SARS-CoV-2","GAAAACACAACGAGGA",2,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39T A105E N118V L131I S139H",5
"lib2","SARS-CoV-2","GAAAACACACAGGGTT",5,65.08,10.72,-0.11,0.04,2.95,1.06,0,">1 nonsynonymous","R27V Y39T L122Q G174R L188Q",5
"lib2","SARS-CoV-2","GAAAACACCGGAGAAT",4,103.73,10.82,-0.01,0.05,2.97,1.03,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","GAAAACACCGTCACCG",12,294.8,10.69,-0.14,0.02,2.92,1.07,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","GAAAACACGCCGCAAA",6,191.15,10.78,-0.06,0.04,2.92,1.1,0,">1 nonsynonymous","K56M K199M",2
"lib2","SARS-CoV-2","GAAAACACGGCGGCCA",3,15.38,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5Q Q79P R136F",3
"lib2","SARS-CoV-2","GAAAACACTTTACATA",6,2.03,NA,NA,NA,NA,NA,NA,"stop","Y35V F156*",2
"lib2","SARS-CoV-2","GAAAACATAAACCACT",3,10.93,6.29,-4.55,0.5,3,1.09,0.02,">1 nonsynonymous","D90K S139M F156E Q168L",4
"lib2","SARS-CoV-2","GAAAACATACTAAGTA",5,26.08,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","A14G V52N T63H V77M Y119H",5
"lib2","SARS-CoV-2","GAAAACATACTTACAT",7,108.94,9.64,-1.2,0.03,2.83,1.11,0,">1 nonsynonymous","Y121L G174R",2
"lib2","SARS-CoV-2","GAAAACATAGTCCCAG",17,118.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37F K48M N64G F99G R179K",5
"lib2","SARS-CoV-2","GAAAACATATATTGAC",2,10.36,10.69,-0.15,0.08,3,1.03,0,">1 nonsynonymous","T55R S164Y",2
"lib2","SARS-CoV-2","GAAAACATATCACATC",3,2,NA,NA,NA,NA,NA,NA,"stop","G83T T201*",2
"lib2","SARS-CoV-2","GAAAACATCTCTTGTA",5,71.56,6,-4.84,2,3,1.09,0,">1 nonsynonymous","W106V L122A G172E",3
"lib2","SARS-CoV-2","GAAAACATCTGCCAAC",2,37.53,8.03,-2.81,0.12,1.6,1.07,0,">1 nonsynonymous","N4G T100G L125R P133A",4
"lib2","SARS-CoV-2","GAAAACATTCCGAGAC",5,109.28,8.05,-2.78,0.12,2.45,1.06,0,">1 nonsynonymous","D90N D98I T148F F156D Y175F",5
"lib2","SARS-CoV-2","GAAAACATTTTGGAAC",3,50.95,8.36,-2.48,0.15,2.18,1.04,0.01,">1 nonsynonymous","P161N S184Y",2
"lib2","SARS-CoV-2","GAAAACCAAGTGGAGG",2,37.39,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","P7R N92S F99L",3
"lib2","SARS-CoV-2","GAAAACCAATCCCCTA",6,55.65,9.83,-1.01,0.09,2.23,1.02,0,">1 nonsynonymous","F8I Y39D T55V D97R N151A",5
"lib2","SARS-CoV-2","GAAAACCAATTACTAA",4,7.7,6.11,-4.72,1.01,3,1,0,">1 nonsynonymous","F8L N13G D90T R179Y",4
"lib2","SARS-CoV-2","GAAAACCACCCTACAG",13,175.4,10.81,-0.03,0.05,2.9,1.13,0,">1 nonsynonymous","L60Y P149R",2
"lib2","SARS-CoV-2","GAAAACCACGCTGGCC",3,0.63,NA,NA,NA,NA,NA,NA,"stop","P7Y S19G Y119H Q144*",4
"lib2","SARS-CoV-2","GAAAACCACTATGCAC",3,68.86,10.08,-0.75,0.07,2.76,1.17,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","GAAAACCCATCGAACT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","S36A E76* D90I F99L C150R P197S",6
"lib2","SARS-CoV-2","GAAAACCGAAATCACC",4,126.15,10.86,0.02,0.08,2.78,1.12,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","GAAAACCGAGATATAC",2,117.13,6,-4.84,2,2.12,1.12,0,">1 nonsynonymous","C6T C61L Y119R L131A I138R G155A",6
"lib2","SARS-CoV-2","GAAAACCGCACACTAA",4,2251.65,9.3,-1.54,0.05,1.75,1.05,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","GAAAACCTAAGGCTTG",2,25.84,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V71R A145D",2
"lib2","SARS-CoV-2","GAAAACCTACAGCGGG",2,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F N118S P177G",3
"lib2","SARS-CoV-2","GAAAACCTCGGTATAG",1,11.79,7.09,-3.75,0.25,1.5,1.06,0.01,">1 nonsynonymous","Q84R E154N Y175E",3
"lib2","SARS-CoV-2","GAAAACCTGCTCTTTT",4,52.96,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","F99I P149L Q176H",3
"lib2","SARS-CoV-2","GAAAACCTGTAAGCCG",2,42.8,9.1,-1.73,0.11,2.83,1.13,0.01,">1 nonsynonymous","A33C A67I Y119S",3
"lib2","SARS-CoV-2","GAAAACCTTTAGCAGC",4,22.78,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8N I104D",2
"lib2","SARS-CoV-2","GAAAACGAAATCTGTG",3,0.48,NA,NA,NA,NA,NA,NA,"stop","F12Y S36M S129* Q176T",4
"lib2","SARS-CoV-2","GAAAACGAACAAGATG",3,81.14,10.69,-0.14,0.03,2.93,1.04,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","GAAAACGAACCGTTAC",2,22.6,9.89,-0.94,0.1,2.3,1.11,0,">1 nonsynonymous","A89R P197R",2
"lib2","SARS-CoV-2","GAAAACGAACTCTTGT",9,131.39,6.45,-4.39,0.37,1.5,1.15,0.01,">1 nonsynonymous","F47S L60P T100I",3
"lib2","SARS-CoV-2","GAAAACGACCCCAATA",3,21.62,8.52,-2.31,0.33,1.5,1.1,0.05,">1 nonsynonymous","R16E K56N F99T",3
"lib2","SARS-CoV-2","GAAAACGATACAGTTC",7,232.38,6.17,-4.67,0.5,1.5,1.18,0.01,">1 nonsynonymous","T55S Y175G",2
"lib2","SARS-CoV-2","GAAAACGATGTATTAA",6,30.63,8.15,-2.69,0.33,1.5,1.04,0.05,">1 nonsynonymous","D137R T201R",2
"lib2","SARS-CoV-2","GAAAACGCAAAGAAAT",2,41.26,6.07,-4.77,0.84,1.5,1.21,0.02,">1 nonsynonymous","G117A P133I Y143I",3
"lib2","SARS-CoV-2","GAAAACGCACTGGGTA",9,104.22,8.87,-1.97,0.08,2.8,1.11,0,">1 nonsynonymous","Y39V S129Q Q168C V173H",4
"lib2","SARS-CoV-2","GAAAACGCATATACGT",2,16.66,10.73,-0.1,0.08,2.76,1.23,0,"1 nonsynonymous","V37D",1
"lib2","SARS-CoV-2","GAAAACGCCATGCATT",14,70.99,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68R D98V E141G",3
"lib2","SARS-CoV-2","GAAAACGCGTGTACAT",2,95.43,10.08,-0.75,0.05,2.35,1.03,0,">1 nonsynonymous","W106A I138V",2
"lib2","SARS-CoV-2","GAAAACGGGACGTTTA",7,98.51,7.29,-3.55,0.1,1.77,1.07,0,"1 nonsynonymous","C150H",1
"lib2","SARS-CoV-2","GAAAACGGTCCATAAC",4,23.5,6,-4.84,2,1.5,1.06,0.07,">1 nonsynonymous","F62R L95R",2
"lib2","SARS-CoV-2","GAAAACGGTTTGATTG",3,65.69,10.67,-0.16,0.04,2.87,1.15,0,">1 nonsynonymous","Y39L G83N P149I",3
"lib2","SARS-CoV-2","GAAAACGTGATAACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S69G T85* I104Y",3
"lib2","SARS-CoV-2","GAAAACGTGATCACAC",13,188.93,10.54,-0.3,0.05,2.86,1.07,0,">1 nonsynonymous","N64Y Q84L",2
"lib2","SARS-CoV-2","GAAAACGTTATATAGT",5,13.72,10.29,-0.55,0.12,2.83,1,0.01,">1 nonsynonymous","L5H S41L F134H",3
"lib2","SARS-CoV-2","GAAAACGTTCGCATGA",3,61.84,10.79,-0.05,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAACGTTTCTTATG",2,13.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L P96G N118S L162Y",4
"lib2","SARS-CoV-2","GAAAACTAAAGGAAAT",5,48.87,10.48,-0.36,0.05,2.91,1.06,0,">1 nonsynonymous","L5T K87N",2
"lib2","SARS-CoV-2","GAAAACTAACAAATGA",4,40.02,6,-4.84,2,1.53,1.12,0.01,">1 nonsynonymous","W106M G146L",2
"lib2","SARS-CoV-2","GAAAACTACAGGAACG",8,141.92,10.32,-0.52,0.02,2.86,1.05,0,">1 nonsynonymous","P7L K128G",2
"lib2","SARS-CoV-2","GAAAACTACCCTTCAC",2,50.74,9.54,-1.29,0.07,2.48,1.03,0,">1 nonsynonymous","S19C G155N K199E",3
"lib2","SARS-CoV-2","GAAAACTATTAATCGG",1,15.38,9.18,-1.65,0.15,1.81,1.08,0.01,"1 nonsynonymous","D137Q",1
"lib2","SARS-CoV-2","GAAAACTCCTCACAAT",5,10.1,6.71,-4.12,0.58,1.5,1,0.07,">1 nonsynonymous","T15V L60Y P82Q F185V",4
"lib2","SARS-CoV-2","GAAAACTCGAGACTGT",11,2.21,NA,NA,NA,NA,NA,NA,"stop","N1T Y119* E135S E154S",4
"lib2","SARS-CoV-2","GAAAACTCTGTAAGAA",7,45.28,10.79,-0.05,0.03,2.98,1.03,0,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","GAAAACTGGACTTCGC",7,33.4,9.63,-1.2,0.09,1.87,1.12,0,">1 nonsynonymous","T3D F99I",2
"lib2","SARS-CoV-2","GAAAACTGTGAGAAAT",3,67.85,6,-4.84,2,3,1.21,0,">1 nonsynonymous","P96H N107Q",2
"lib2","SARS-CoV-2","GAAAACTGTTATGGTA",3,123.67,10.83,-0.01,0.04,2.95,1.07,0,">1 nonsynonymous","S29R S36E",2
"lib2","SARS-CoV-2","GAAAACTTACACACAA",6,100.73,8.33,-2.5,0.18,1.5,1.11,0.02,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","GAAAACTTCTAAACAC",1,17.22,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9R D68R P149S",3
"lib2","SARS-CoV-2","GAAAACTTGCCAGGCT",6,122.42,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","A14Y D90L C102F F160H P177L",5
"lib2","SARS-CoV-2","GAAAACTTTTAAAGCA",8,8.83,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","P96Q I104Q L122A",3
"lib2","SARS-CoV-2","GAAAAGAAAAGCAAAT",4,1.58,NA,NA,NA,NA,NA,NA,"stop","V52I A67I G74S Y143* Y165M",5
"lib2","SARS-CoV-2","GAAAAGAAACGAAGGT",4,7.85,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13M G51D R136V",3
"lib2","SARS-CoV-2","GAAAAGAACCGGTGAG",1,25.22,10.73,-0.1,0.04,2.98,1.05,0,">1 nonsynonymous","C61K T201R",2
"lib2","SARS-CoV-2","GAAAAGAACCTATCTA",4,43.78,10.3,-0.54,0.05,2.97,1.05,0,"1 nonsynonymous","G155H",1
"lib2","SARS-CoV-2","GAAAAGAAGCAGGTAT",7,37.75,6.08,-4.76,1.04,1.5,1.14,0.03,">1 nonsynonymous","V20L G83P",2
"lib2","SARS-CoV-2","GAAAAGAATAACTACT",5,45.33,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","GAAAAGACACACCGTT",8,132.72,9.47,-1.36,0.09,1.95,1.07,0,"1 nonsynonymous","D137N",1
"lib2","SARS-CoV-2","GAAAAGACACGTATTT",7,38.78,9.92,-0.91,0.06,2.47,1.1,0,">1 nonsynonymous","C61G G83T",2
"lib2","SARS-CoV-2","GAAAAGACAGGACAAC",1,9.21,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F12Q P96I S139D P161D",4
"lib2","SARS-CoV-2","GAAAAGACCCAGTTAA",16,183.06,10.84,0,0.05,2.9,1.07,0,">1 nonsynonymous","L5D S129N S139G",3
"lib2","SARS-CoV-2","GAAAAGAGACATACAA",2,14.76,10.71,-0.13,0.1,2.86,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAGAGGGCCCTAA",1,43.82,10.53,-0.31,0.06,3,1,0,">1 nonsynonymous","S29T N58L",2
"lib2","SARS-CoV-2","GAAAAGAGTGCATATA",11,172.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N24E Y143W F156V C158W Y165S",5
"lib2","SARS-CoV-2","GAAAAGATGCCTGGTA",1,8.28,9.81,-1.02,0.26,1.5,1,0.04,">1 nonsynonymous","C102W N130L",2
"lib2","SARS-CoV-2","GAAAAGATTGTGTAGT",1,6.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35K C158Y",2
"lib2","SARS-CoV-2","GAAAAGCAAAAACGCA",9,42.57,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","R16L F99V A105W I138F",4
"lib2","SARS-CoV-2","GAAAAGCAAGTCAAAC",2,45.91,10.6,-0.24,0.05,2.88,1.07,0,">1 nonsynonymous","T100S N120S",2
"lib2","SARS-CoV-2","GAAAAGCAGCAACTAC",7,68.56,10.79,-0.05,0.05,2.9,1.1,0,">1 nonsynonymous","G9V R27K",2
"lib2","SARS-CoV-2","GAAAAGCGCAAAGACG",4,71.56,10.09,-0.75,0.05,2.52,1.02,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","GAAAAGCTACCAAGTA",3,40.87,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","R25A L38M K56L W106L K114V",5
"lib2","SARS-CoV-2","GAAAAGCTTAAAAAAC",5,61.88,10.99,0.15,0.06,2.9,1.09,0,"1 nonsynonymous","S36D",1
"lib2","SARS-CoV-2","GAAAAGCTTAAAAGGA",8,159.18,10.85,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAGGACACGAACA",10,56.22,9.36,-1.47,0.07,2.02,1.04,0,">1 nonsynonymous","N1L S19M G83N",3
"lib2","SARS-CoV-2","GAAAAGGACCGCAAAT",5,28.23,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55C Y123D",2
"lib2","SARS-CoV-2","GAAAAGGATGCATTCT",1,3.07,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAGGATTGTACCT",7,39.48,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K56W Y91S K114S G174M T201R",5
"lib2","SARS-CoV-2","GAAAAGGCATTATATA",1,15.92,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","V52R N120G C158S",3
"lib2","SARS-CoV-2","GAAAAGGCGTTTTCCA",7,7.11,6,-4.84,1.88,3,1.12,0.08,">1 nonsynonymous","S41F V77L G101L N107L G146K G174P",6
"lib2","SARS-CoV-2","GAAAAGGGAACGTCAA",1,59.73,10.67,-0.16,0.04,2.93,1.08,0,">1 nonsynonymous","E10D F160G",2
"lib2","SARS-CoV-2","GAAAAGGTGATAGTTG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","P54*",1
"lib2","SARS-CoV-2","GAAAAGGTGATATTTA",5,158.96,10.22,-0.62,0.07,2.55,1.06,0,"1 nonsynonymous","C102L",1
"lib2","SARS-CoV-2","GAAAAGGTGTTCATAA",5,71.62,10.87,0.04,0.06,2.93,1.08,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","GAAAAGTAAATACAAA",1,28.33,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T3S K56T P82S F99K",4
"lib2","SARS-CoV-2","GAAAAGTAACAACATC",1,4.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S N107L",2
"lib2","SARS-CoV-2","GAAAAGTAATCAATGC",5,35.87,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I104N V115S",2
"lib2","SARS-CoV-2","GAAAAGTACACCCATA",6,0.29,NA,NA,NA,NA,NA,NA,"stop","Y50*",1
"lib2","SARS-CoV-2","GAAAAGTACCAACGCG",1,44.03,10.9,0.07,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAAGTATACAAGCT",1,82.26,10.91,0.07,0.05,2.9,1.1,0,">1 nonsynonymous","S43A T201H",2
"lib2","SARS-CoV-2","GAAAAGTATCACCGTG",6,21.33,9.87,-0.97,0.14,2.05,1.09,0.01,"1 nonsynonymous","W106H",1
"lib2","SARS-CoV-2","GAAAAGTCAAAACGGG",5,0,NA,NA,NA,NA,NA,NA,"stop","L111R Y123* R127K C158T E186C",5
"lib2","SARS-CoV-2","GAAAAGTCGCAGAAGT",1,8.74,10.89,0.06,0.1,2.93,1.02,0,"1 nonsynonymous","N151S",1
"lib2","SARS-CoV-2","GAAAAGTGAATACTAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GAAAAGTGAATACTAG",3,6.27,9.06,-1.78,0.2,2.52,1.02,0.01,"1 nonsynonymous","N107H",1
"lib2","SARS-CoV-2","GAAAAGTGCTAGAACT",3,18.92,10.07,-0.77,0.2,2.09,1.13,0.03,">1 nonsynonymous","T15G N107G",2
"lib2","SARS-CoV-2","GAAAAGTGGTGGATGG",6,62.64,10.81,-0.03,0.06,2.94,1.08,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","GAAAAGTTAGAGCAAC",4,20.16,6.27,-4.56,0.56,1.5,1.11,0.01,">1 nonsynonymous","C6R R124S S129T",3
"lib2","SARS-CoV-2","GAAAAGTTTCTGACAC",3,32.56,9.33,-1.51,0.09,2.39,1.1,0,">1 nonsynonymous","A81H K87W",2
"lib2","SARS-CoV-2","GAAAATAAAAAAACAC",3,60.51,10.38,-0.45,0.05,2.91,1.04,0,">1 nonsynonymous","T3F K56V",2
"lib2","SARS-CoV-2","GAAAATAAAACCGATA",3,45.28,10.34,-0.5,0.06,2.94,1.05,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","GAAAATAAAACTTAAC",9,181.02,10.03,-0.8,0.03,2.87,1.03,0,">1 nonsynonymous","I2H S19H S41R",3
"lib2","SARS-CoV-2","GAAAATAAACTAACAA",5,77.9,10.49,-0.35,0.02,2.9,1.07,0,">1 nonsynonymous","E10A A33I",2
"lib2","SARS-CoV-2","GAAAATAAACTTTGGG",7,112.74,9.56,-1.27,0.09,2.13,1.04,0,">1 nonsynonymous","G9M V37L L162C",3
"lib2","SARS-CoV-2","GAAAATAACCCAATAT",7,303.8,10.18,-0.65,0.03,2.82,1.04,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","GAAAATAAGCTGCGGC",1,10.79,NA,NA,NA,NA,NA,NA,"stop","S41C R127*",2
"lib2","SARS-CoV-2","GAAAATACAATGTCAT",7,213.79,10.7,-0.13,0.03,2.99,1.01,0,">1 nonsynonymous","S41R K198S",2
"lib2","SARS-CoV-2","GAAAATACACACTCAC",4,45.25,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5D G101L W106F L111A Y165L G174S",6
"lib2","SARS-CoV-2","GAAAATACATTAAAAT",3,67.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N24C T100N N107Y L183F",4
"lib2","SARS-CoV-2","GAAAATACCTAGCCTG",3,113.78,9.49,-1.35,0.08,1.85,1.07,0,">1 nonsynonymous","V11S K56Y L188K",3
"lib2","SARS-CoV-2","GAAAATACGATATAAC",1,35.5,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G51T I88T Y123L G155R F167Y",5
"lib2","SARS-CoV-2","GAAAATACGATTTTAA",4,17.86,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S19E K94R G101Q",3
"lib2","SARS-CoV-2","GAAAATACGGGTACAT",1,36.17,10.8,-0.04,0.08,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAATACTAAGGGAC",8,62.38,6.25,-4.58,0.53,1.5,1.15,0.01,">1 nonsynonymous","A42W F70N Q84L",3
"lib2","SARS-CoV-2","GAAAATACTCGATAAG",3,22.08,10.39,-0.45,0.1,2.82,1.14,0,">1 nonsynonymous","C6F Q168W",2
"lib2","SARS-CoV-2","GAAAATAGAAATTCAT",2,39.4,10.74,-0.1,0.06,2.97,1.05,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","GAAAATAGATATCGTA",8,82.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31L S41T R73I F185P",4
"lib2","SARS-CoV-2","GAAAATAGATTTCCAA",10,2.28,NA,NA,NA,NA,NA,NA,"stop","N1* I88H T148A",3
"lib2","SARS-CoV-2","GAAAATAGTTCACAGG",1,17.63,6.91,-3.92,0.35,1.5,1.09,0.04,">1 nonsynonymous","F47V L57K T170V",3
"lib2","SARS-CoV-2","GAAAATATAAATCAGT",4,55.16,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9A D68A N118S P149N N151S K198T",6
"lib2","SARS-CoV-2","GAAAATATATATCAGA",7,76.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64S A89S P149R G172W",4
"lib2","SARS-CoV-2","GAAAATATCCCAATAA",6,7.47,NA,NA,NA,NA,NA,NA,"stop","A18P A105V L122* Y143S",4
"lib2","SARS-CoV-2","GAAAATATGGAAGTTC",13,44.08,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T15E K56G V77E L95R D112T G146F",6
"lib2","SARS-CoV-2","GAAAATATTAATTAAG",9,88.31,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35L W106T N118K I142S L162F",5
"lib2","SARS-CoV-2","GAAAATATTGAAAGTG",7,4.16,NA,NA,NA,NA,NA,NA,"stop","V37S Y91F S113*",3
"lib2","SARS-CoV-2","GAAAATATTGTATGTA",2,32.69,6.22,-4.62,0.58,1.5,1.13,0.01,">1 nonsynonymous","P7V S41A D90S Y143T",4
"lib2","SARS-CoV-2","GAAAATATTGTTAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* G83N F156T",3
"lib2","SARS-CoV-2","GAAAATCAAACGACCG",12,100.02,6,-4.84,0.95,1.5,1.18,0.01,">1 nonsynonymous","A14T Y123D",2
"lib2","SARS-CoV-2","GAAAATCAAAGTGACC",6,107.01,9.73,-1.11,0.06,2.1,1.08,0,">1 nonsynonymous","V37N K94V I138L",3
"lib2","SARS-CoV-2","GAAAATCAAATAATAT",9,31.71,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D90F F99D T201V",3
"lib2","SARS-CoV-2","GAAAATCAAATACCAT",5,0.77,NA,NA,NA,NA,NA,NA,"stop","P149* L162P",2
"lib2","SARS-CoV-2","GAAAATCAGCACATTT",3,0.72,NA,NA,NA,NA,NA,NA,"stop","L95S V103* Y165K",3
"lib2","SARS-CoV-2","GAAAATCAGGCCTACA",3,23.78,10.27,-0.57,0.08,2.93,1.07,0.01,">1 nonsynonymous","K87V G152F",2
"lib2","SARS-CoV-2","GAAAATCATATGAGGT",2,62.59,10.67,-0.17,0.04,2.89,1.14,0,"1 nonsynonymous","C61I",1
"lib2","SARS-CoV-2","GAAAATCCAAAGAATG",3,105.97,10.16,-0.67,0.03,2.88,1.02,0,">1 nonsynonymous","I2S P161S",2
"lib2","SARS-CoV-2","GAAAATCCTAAATTAA",2,40.18,9.32,-1.52,0.09,2.04,1.04,0,">1 nonsynonymous","S45Y A105V S129P",3
"lib2","SARS-CoV-2","GAAAATCCTCTTACCT",4,2.17,NA,NA,NA,NA,NA,NA,"stop","E10N R25T C49G D68M Q176*",5
"lib2","SARS-CoV-2","GAAAATCGATATGCTG",15,253.39,10.5,-0.33,0.03,2.93,1.04,0,"1 nonsynonymous","S45R",1
"lib2","SARS-CoV-2","GAAAATCGTTGAACCA",6,124.17,9.99,-0.85,0.06,2.76,1,0,">1 nonsynonymous","L5S Q144L",2
"lib2","SARS-CoV-2","GAAAATCTAACTCGAA",3,99.1,10.78,-0.05,0.03,2.92,1.06,0,"1 nonsynonymous","I138Q",1
"lib2","SARS-CoV-2","GAAAATCTAATAACAT",7,44.71,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A81P T100D G152C",3
"lib2","SARS-CoV-2","GAAAATCTAATCCACC",1,17.2,10.86,0.02,0.09,2.85,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAATCTGTAAGAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34L C49R K128*",3
"lib2","SARS-CoV-2","GAAAATCTTCCCTAAA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","V11R K26N A42I K94G K198*",5
"lib2","SARS-CoV-2","GAAAATGATAAAATTG",1,3.63,NA,NA,NA,NA,NA,NA,"stop","Q84S V103R Q168*",3
"lib2","SARS-CoV-2","GAAAATGATGGTTACT",2,0,NA,NA,NA,NA,NA,NA,"stop","K48* Y66F V115N F134D",4
"lib2","SARS-CoV-2","GAAAATGATTCTATTC",4,7.52,6,-4.84,0.8,1.5,1.06,0,">1 nonsynonymous","I2Q S36Y F70Q L95D S164H T170Y",6
"lib2","SARS-CoV-2","GAAAATGCAGTTATGG",1,18.83,10.25,-0.59,0.06,2.78,1.01,0,">1 nonsynonymous","N30R T46K",2
"lib2","SARS-CoV-2","GAAAATGCCCAATAAT",3,0.91,NA,NA,NA,NA,NA,NA,"stop","F12P F44T D97T V103A G174N V182*",6
"lib2","SARS-CoV-2","GAAAATGCCCCTCTTA",3,21.93,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F47N V103L F185C",3
"lib2","SARS-CoV-2","GAAAATGCCGTCTGAA",10,191.23,8.98,-1.85,0.08,2.54,1.08,0,">1 nonsynonymous","C6L P169N",2
"lib2","SARS-CoV-2","GAAAATGCTACGGGAC",2,8.07,10.78,-0.06,0.06,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAATGCTCAAAAAA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","C6A G51Y D97* Y175V",4
"lib2","SARS-CoV-2","GAAAATGGAAGTTGCT",4,25.82,9.05,-1.79,0.19,1.7,1.04,0.02,">1 nonsynonymous","W106L S184L",2
"lib2","SARS-CoV-2","GAAAATGTAAACAAAC",4,54.22,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10S T63H G86L V173F L188I",5
"lib2","SARS-CoV-2","GAAAATGTAAATCCAC",1,7.04,11.14,0.31,0.58,2.36,1,0.05,">1 nonsynonymous","G83C V173I",2
"lib2","SARS-CoV-2","GAAAATGTACCGATTC",4,11.28,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C61K V103I S139V P161H",4
"lib2","SARS-CoV-2","GAAAATGTCTAGTAAT",18,155.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V32G F70V L95T S184Y",4
"lib2","SARS-CoV-2","GAAAATGTGCTGAAGG",20,97.37,6,-4.84,1.52,3,1.17,0,">1 nonsynonymous","P96Y F134R A192S",3
"lib2","SARS-CoV-2","GAAAATGTGCTGAGAT",2,16.61,10.18,-0.66,0.07,2.89,1.04,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","GAAAATGTTAGACAAC",6,56.34,10.81,-0.03,0.04,2.89,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAATGTTCAGTGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","Q84* D90F N118I",3
"lib2","SARS-CoV-2","GAAAATGTTCGAAACT",5,107.01,10.39,-0.45,0.06,2.86,1.1,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","GAAAATTAAAATATTC",2,64.38,11.03,0.2,0.06,2.91,1.09,0,"1 nonsynonymous","V37F",1
"lib2","SARS-CoV-2","GAAAATTAAAATCTCG",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4D G74Y Y159A",3
"lib2","SARS-CoV-2","GAAAATTAAACTCTGA",7,36.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L N120A E154L",3
"lib2","SARS-CoV-2","GAAAATTACCAAGGTT",3,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M G51A G117F T148Y",4
"lib2","SARS-CoV-2","GAAAATTAGTGCCTAT",13,1.73,NA,NA,NA,NA,NA,NA,"stop","V37T S41Y P54D D90E S113*",5
"lib2","SARS-CoV-2","GAAAATTATATAGGAG",2,40.45,10.36,-0.47,0.07,2.84,1.11,0,">1 nonsynonymous","Y123L K132A",2
"lib2","SARS-CoV-2","GAAAATTATCAAAGTT",5,1.64,NA,NA,NA,NA,NA,NA,"stop","L5* K26L Y165T",3
"lib2","SARS-CoV-2","GAAAATTATTACGCAC",5,47.39,10.91,0.08,0.07,3,1,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","GAAAATTCACGAATGG",17,0.1,NA,NA,NA,NA,NA,NA,"stop","F12M V37D F62V G83* Y93R N110S N118G",7
"lib2","SARS-CoV-2","GAAAATTCATATGAGC",1,9.81,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","N4R R27W K48W W106T",4
"lib2","SARS-CoV-2","GAAAATTCCAGACAAC",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N L57S Y91V",3
"lib2","SARS-CoV-2","GAAAATTCTAAACTAC",5,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","GAAAATTCTACAAATG",9,140.34,9.53,-1.31,0.04,2.86,1.08,0,"1 nonsynonymous","I142E",1
"lib2","SARS-CoV-2","GAAAATTCTTTCTTAT",5,131.8,9.83,-1.01,0.1,2.16,1.08,0,">1 nonsynonymous","D59E P96M T201H",3
"lib2","SARS-CoV-2","GAAAATTGAATACTAT",3,53.46,8.31,-2.52,0.15,2.07,1.02,0.01,">1 nonsynonymous","D34T A145D",2
"lib2","SARS-CoV-2","GAAAATTGCGAATGGA",3,89.75,9.78,-1.05,0.07,2.6,1.05,0,">1 nonsynonymous","C6I L131V",2
"lib2","SARS-CoV-2","GAAAATTGTGACAATG",8,19.42,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A14I K87H P96L R179G",4
"lib2","SARS-CoV-2","GAAAATTTAGCGACAT",1,7.03,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T63D A81V L131K",3
"lib2","SARS-CoV-2","GAAACAAAAAATTTGT",2,37.36,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","V37C D59A G101L",3
"lib2","SARS-CoV-2","GAAACAAAAATTTCGA",14,8.67,NA,NA,NA,NA,NA,NA,"stop","A42M Q84*",2
"lib2","SARS-CoV-2","GAAACAAAAGCTCCTA",5,17.32,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","K56G T100A D112Y G152P",4
"lib2","SARS-CoV-2","GAAACAAACGATTTAT",11,129.44,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9Y A145E F156I Y175K",4
"lib2","SARS-CoV-2","GAAACAAACGCGCAGT",10,145.7,6.8,-4.04,0.1,1.81,1.11,0,">1 nonsynonymous","L60M C150W",2
"lib2","SARS-CoV-2","GAAACAACAGTACGGT",25,596.01,10.74,-0.1,0.03,2.94,1.07,0,"1 nonsynonymous","S129M",1
"lib2","SARS-CoV-2","GAAACAACCCGCCTAA",4,38.76,10.79,-0.04,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAACAACTGCGTTCA",4,0.46,NA,NA,NA,NA,NA,NA,"stop","L57H L125*",2
"lib2","SARS-CoV-2","GAAACAAGAGAGCTGA",4,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F L131N G155N",3
"lib2","SARS-CoV-2","GAAACAAGGTATCATA",2,99.48,10.72,-0.11,0.04,2.96,1.06,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","GAAACAAGTCCTCAAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L V153Y Y165S T201Q",4
"lib2","SARS-CoV-2","GAAACAATAACTTAGA",9,125.86,6,-4.84,1.78,1.5,1.19,0.02,">1 nonsynonymous","P7L F17V A89Y",3
"lib2","SARS-CoV-2","GAAACAATAAGCCTGA",6,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y L57M E141L F156D",4
"lib2","SARS-CoV-2","GAAACAATACCTATTA",13,67.07,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R25S N120L N130V C158S Q168R T201S",6
"lib2","SARS-CoV-2","GAAACAATAGAGTCAG",2,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C G86T L122M S129R C150F",5
"lib2","SARS-CoV-2","GAAACAATATGCAGTC",3,0.62,NA,NA,NA,NA,NA,NA,"stop","T3R D90* D112W F167L",4
"lib2","SARS-CoV-2","GAAACAATGACCTTGT",3,14.84,10.78,-0.05,0.12,2.84,1.18,0,"1 nonsynonymous","V153A",1
"lib2","SARS-CoV-2","GAAACAATGGAAGCCC",5,56.79,9.58,-1.26,0.12,1.75,1.1,0.01,">1 nonsynonymous","I88T T140N S200T",3
"lib2","SARS-CoV-2","GAAACAATGTTCCATG",1,1,NA,NA,NA,NA,NA,NA,"stop","T15K N58L G83F W106* F156P G166*",6
"lib2","SARS-CoV-2","GAAACAATGTTTAGAG",12,70.05,9.73,-1.11,0.14,2.02,1.2,0.01,">1 nonsynonymous","N4H A33T T63L P133A S139N",5
"lib2","SARS-CoV-2","GAAACACAATTAACAG",8,1.89,NA,NA,NA,NA,NA,NA,"stop","K26L S36I R73*",3
"lib2","SARS-CoV-2","GAAACACAGAACTACT",5,48.81,8.16,-2.67,0.3,1.5,1.05,0.03,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","GAAACACATACCCCCT",4,101.52,9.96,-0.88,0.08,2.34,1.01,0,">1 nonsynonymous","Y35C F47L",2
"lib2","SARS-CoV-2","GAAACACATTGGTACG",3,44.95,10.79,-0.05,0.08,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAACACATTTATCAT",5,60.41,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F12A Q176R",2
"lib2","SARS-CoV-2","GAAACACCAGACTAAC",1,0.88,NA,NA,NA,NA,NA,NA,"stop","S45V I104* P161M",3
"lib2","SARS-CoV-2","GAAACACCAGGCACTA",9,128.4,10.52,-0.32,0.05,2.95,1,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","GAAACACCTCTTTTCC",2,155.09,10.25,-0.59,0.03,2.72,1.04,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","GAAACACCTGTAACAA",4,154.37,10.51,-0.32,0.03,2.95,1.06,0,">1 nonsynonymous","C61E V173G",2
"lib2","SARS-CoV-2","GAAACACCTTTCAATG",9,89.52,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L38A Y93S",2
"lib2","SARS-CoV-2","GAAACACGATTGCTTA",4,73.39,8.87,-1.97,0.09,2.9,1.14,0,">1 nonsynonymous","N64V G166L",2
"lib2","SARS-CoV-2","GAAACACGCTTTTCAG",6,26.71,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3N G83V G101S Y123A G155L N171M",6
"lib2","SARS-CoV-2","GAAACACGGCCTAACA",1,44.85,10.75,-0.08,0.05,2.87,1.15,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","GAAACACTAAAATGAA",4,23.44,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","T46P C150L",2
"lib2","SARS-CoV-2","GAAACACTACAATGAT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F V115F L131S S139G P149C K199M",6
"lib2","SARS-CoV-2","GAAACACTACTCACAT",4,56.7,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","P82F",1
"lib2","SARS-CoV-2","GAAACACTCCACATAT",6,130.44,10.63,-0.2,0.04,2.95,1.06,0,"1 nonsynonymous","F8I",1
"lib2","SARS-CoV-2","GAAACACTGGTCAAGT",7,32.65,8.81,-2.03,0.1,2.69,1.04,0,">1 nonsynonymous","S53R R73E T100M S147N",4
"lib2","SARS-CoV-2","GAAACACTTCAAATGC",3,43.44,7.39,-3.44,0.31,1.5,1.15,0.04,">1 nonsynonymous","C102T L122S",2
"lib2","SARS-CoV-2","GAAACAGAAAAACCGA",5,140.09,10.67,-0.17,0.03,2.93,1.05,0,">1 nonsynonymous","A14K T46M",2
"lib2","SARS-CoV-2","GAAACAGACATTATCC",11,64.24,8.16,-2.67,0.24,1.5,1.01,0.02,">1 nonsynonymous","Y91A R127N",2
"lib2","SARS-CoV-2","GAAACAGATAACAAAA",7,157.13,10.86,0.03,0.05,2.96,1.05,0,"1 nonsynonymous","T100V",1
"lib2","SARS-CoV-2","GAAACAGCAGAAAGCC",3,22.13,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T15S L57R V77L D90Y W106V T201D",6
"lib2","SARS-CoV-2","GAAACAGCTTAGCAAA",4,261.21,8.93,-1.9,0.05,2.12,1.07,0,">1 nonsynonymous","P54Y Q176R",2
"lib2","SARS-CoV-2","GAAACAGGAGTTACTA",2,42.13,9.87,-0.97,0.11,2.41,1.02,0,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","GAAACAGGCTAAACAG",2,0.12,NA,NA,NA,NA,NA,NA,"stop","P7V T100H Y165*",3
"lib2","SARS-CoV-2","GAAACAGGTCGCAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","F99* N171S",2
"lib2","SARS-CoV-2","GAAACAGTTATACAGA",8,36.95,6.9,-3.94,0.46,1.5,1.06,0.05,">1 nonsynonymous","K56T E76N W106S T170F",4
"lib2","SARS-CoV-2","GAAACATAATGATTTA",2,28.97,9.29,-1.54,0.12,2.96,1.12,0.01,">1 nonsynonymous","I2S Y119M",2
"lib2","SARS-CoV-2","GAAACATACCAGATAT",19,100.25,8.5,-2.34,0.2,1.5,1.03,0.01,">1 nonsynonymous","R16E R27L A42F R127L K199T",5
"lib2","SARS-CoV-2","GAAACATACTAAAAAT",6,128.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S29W R78L R124S Q168P",4
"lib2","SARS-CoV-2","GAAACATAGAAATAGG",4,16.34,10.96,0.12,0.14,2.89,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GAAACATATAGCAATC",5,54.5,9.87,-0.97,0.05,2.9,1.1,0,">1 nonsynonymous","S29E T170M",2
"lib2","SARS-CoV-2","GAAACATCACTGCAGT",7,78.56,6.44,-4.4,0.43,1.5,1.17,0.01,">1 nonsynonymous","W23S S139F E154A",3
"lib2","SARS-CoV-2","GAAACATCCCTATAAA",8,52.7,10.75,-0.08,0.07,2.9,1.12,0,">1 nonsynonymous","L5P R27M",2
"lib2","SARS-CoV-2","GAAACATTAAAAGGAT",4,100.66,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","T63K P82S T85M I142S V173A Y178S S200P",7
"lib2","SARS-CoV-2","GAAACATTACTGTTGC",4,15.11,9.6,-1.23,0.23,1.5,1,0.03,">1 nonsynonymous","C102A T201N",2
"lib2","SARS-CoV-2","GAAACATTCAAAAAGT",2,72.71,10.06,-0.78,0.03,2.99,1.02,0,">1 nonsynonymous","G83S G174L",2
"lib2","SARS-CoV-2","GAAACATTCCTGACAA",1,23.61,6.47,-4.36,0.5,1.5,1.15,0.02,">1 nonsynonymous","C6M Y35E I80Y I138R",4
"lib2","SARS-CoV-2","GAAACATTCTGACAAA",11,97.1,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K48P N92M",2
"lib2","SARS-CoV-2","GAAACCAAAAATTCCT",2,20.66,8.23,-2.61,0.3,1.59,1.07,0.04,">1 nonsynonymous","F12I Y39K G51N L60D N110C Y119Q S200Y",7
"lib2","SARS-CoV-2","GAAACCAAATATGAAA",1,6.5,6,-4.84,2,3,1.02,0,">1 nonsynonymous","K26M V77L N92A K128R",4
"lib2","SARS-CoV-2","GAAACCAAGTTAACTA",1,6.29,8.45,-2.38,0.29,2.05,1.2,0.04,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","GAAACCAATAGAGTAG",4,85.44,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9N R73Y G116Q Q176V",4
"lib2","SARS-CoV-2","GAAACCAATAGATGAA",2,13.38,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R127V",1
"lib2","SARS-CoV-2","GAAACCACAAATCAAA",7,113.84,10.76,-0.08,0.04,2.99,1.03,0,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","GAAACCACAACCTCCT",11,72.55,8.55,-2.29,0.18,1.83,1.09,0.01,">1 nonsynonymous","S41H A89G V103I P149L",4
"lib2","SARS-CoV-2","GAAACCAGAACGCCAC",2,178.1,10.22,-0.61,0.04,2.82,1.06,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","GAAACCAGAAGCGATA",22,408.13,9.71,-1.13,0.03,2.87,1.05,0,">1 nonsynonymous","P96G Y119R",2
"lib2","SARS-CoV-2","GAAACCAGCCACCTCA",7,0.16,NA,NA,NA,NA,NA,NA,"stop","R27* S43M Y121A Q144R F156N A190S T201E",7
"lib2","SARS-CoV-2","GAAACCAGCCCATATG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","G9F Y93M Y121*",3
"lib2","SARS-CoV-2","GAAACCATATGCCGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","S43A P133* T201R",3
"lib2","SARS-CoV-2","GAAACCATCATCAATG",3,109.03,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S36K Y119L N157K T170S",4
"lib2","SARS-CoV-2","GAAACCCAAATGATCC",10,121.88,10.77,-0.06,0.04,2.93,1.08,0,">1 nonsynonymous","A42M T201Q",2
"lib2","SARS-CoV-2","GAAACCCAAGATGTTA",2,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A D98V Y119H R127M",4
"lib2","SARS-CoV-2","GAAACCCAAGTTATAA",1,12.66,10.97,0.13,0.08,3,1,0,"1 nonsynonymous","I138L",1
"lib2","SARS-CoV-2","GAAACCCACGCCTAGG",2,54.3,6.55,-4.28,0.2,1.65,1.11,0,">1 nonsynonymous","F47L Y143R",2
"lib2","SARS-CoV-2","GAAACCCACTAACACA",13,195.96,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6S Y35C L38V I142K E154G",5
"lib2","SARS-CoV-2","GAAACCCATAAGAGAC",4,80.74,10.85,0.02,0.06,2.99,1.02,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","GAAACCCCATCTAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q F99S Y119L Y175I",4
"lib2","SARS-CoV-2","GAAACCCGGAGTATAA",1,23.44,9.69,-1.14,0.14,1.84,1,0.01,">1 nonsynonymous","W23M I104F V173I",3
"lib2","SARS-CoV-2","GAAACCCTCTCAGCCC",2,0.59,NA,NA,NA,NA,NA,NA,"stop","P96H Y143*",2
"lib2","SARS-CoV-2","GAAACCCTGTACATGT",11,4.28,NA,NA,NA,NA,NA,NA,"stop","G9* W23S D68*",3
"lib2","SARS-CoV-2","GAAACCCTTACAGGCG",4,1.6,NA,NA,NA,NA,NA,NA,"stop","N107T Y123* Q144S",3
"lib2","SARS-CoV-2","GAAACCGAAAGAGAAA",10,80.24,6.16,-4.67,0.62,1.5,1.13,0.01,">1 nonsynonymous","D34N Y39H P82R I104L",4
"lib2","SARS-CoV-2","GAAACCGAGAGCCTAA",2,3.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","GAAACCGATAGTACCG",10,320.09,10.68,-0.16,0.03,2.94,1.06,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","GAAACCGATTGTGATG",3,0,NA,NA,NA,NA,NA,NA,"stop","F44I S113P F167R T201*",4
"lib2","SARS-CoV-2","GAAACCGTGCAGCACC",6,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63S G83L V182S",3
"lib2","SARS-CoV-2","GAAACCTAAACCGGAG",1,40.62,10.47,-0.37,0.06,2.96,1.04,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","GAAACCTAATAAATAC",2,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74R G83F F185H",3
"lib2","SARS-CoV-2","GAAACCTAATAACTAA",1,9.03,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A105R C150Y T201Y",3
"lib2","SARS-CoV-2","GAAACCTACTACTCAT",5,46.26,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N30M N92M D112K E141C",4
"lib2","SARS-CoV-2","GAAACCTGCCAAGGAG",5,43.7,10.72,-0.12,0.05,2.97,1.09,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","GAAACCTTAATAAACG",6,156.33,10.89,0.05,0.05,2.92,1.09,0,"1 nonsynonymous","R16S",1
"lib2","SARS-CoV-2","GAAACCTTACGGCCAA",3,51.09,10.09,-0.75,0.05,2.89,1.01,0,">1 nonsynonymous","T15C V37S",2
"lib2","SARS-CoV-2","GAAACGAAATTGCAAG",1,19.89,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","P96D G172V K199T",3
"lib2","SARS-CoV-2","GAAACGAACCAATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* D112E E154H T201*",4
"lib2","SARS-CoV-2","GAAACGAACGGCCCAT",4,61.65,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T55N C61T I80R D112R",4
"lib2","SARS-CoV-2","GAAACGAACGTACGGT",1,24.41,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","F44M L95V P177M T201K",4
"lib2","SARS-CoV-2","GAAACGAACTCAAGTA",9,76.31,6,-4.84,1.12,1.5,1.16,0,">1 nonsynonymous","L38A N118S N151I F156Q V173R T201F",6
"lib2","SARS-CoV-2","GAAACGAATCAAAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K L122K",2
"lib2","SARS-CoV-2","GAAACGAATGCCAAAA",13,150.38,6,-4.84,1.44,1.5,1.16,0.01,">1 nonsynonymous","S19E P82Y L122R G152S L188R",5
"lib2","SARS-CoV-2","GAAACGAATTCAAATC",3,0.12,NA,NA,NA,NA,NA,NA,"stop","N13F K26S S41R V71R P96T P133Q G152*",7
"lib2","SARS-CoV-2","GAAACGACATCAATGT",2,36.19,10.71,-0.13,0.06,2.91,1.1,0,">1 nonsynonymous","A42G D98S Q163S",3
"lib2","SARS-CoV-2","GAAACGACCACAAGAT",5,149.71,9.78,-1.05,0.05,2.76,1.01,0,">1 nonsynonymous","R78C N107P V153Y K198R",4
"lib2","SARS-CoV-2","GAAACGACCACTATCA",10,82.65,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y50D Y66S",2
"lib2","SARS-CoV-2","GAAACGACTCCTGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","T55* Q84M T100P Y143E F167V P177R",6
"lib2","SARS-CoV-2","GAAACGAGACAGGCGA",5,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P96G F99Y V182G",4
"lib2","SARS-CoV-2","GAAACGAGCACAAGTG",12,163.99,10.47,-0.37,0.04,2.88,1.1,0,">1 nonsynonymous","Y66A S200L",2
"lib2","SARS-CoV-2","GAAACGAGCCTCACGA",2,30.08,6,-4.84,1.68,1.5,1.14,0.04,">1 nonsynonymous","V20M T63M",2
"lib2","SARS-CoV-2","GAAACGATCATTAAAT",15,85.05,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y21Q A33P G86T",3
"lib2","SARS-CoV-2","GAAACGATCGCTGTCT",2,1.87,NA,NA,NA,NA,NA,NA,"stop","C61H Q176*",2
"lib2","SARS-CoV-2","GAAACGATTAAAAGCC",5,57.62,10.07,-0.77,0.1,2.53,1.11,0.01,">1 nonsynonymous","A14V G155A",2
"lib2","SARS-CoV-2","GAAACGCAAACGTGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y S19T C61R T85Q T100I E135W",6
"lib2","SARS-CoV-2","GAAACGCAAGATAATA",5,75.05,10.66,-0.18,0.07,2.89,1.11,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","GAAACGCAATTTACCA",1,17.46,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y121V P133D P169G V182R",4
"lib2","SARS-CoV-2","GAAACGCAGGTGAACT",6,40.3,6.88,-3.96,0.37,1.5,1.04,0.03,">1 nonsynonymous","Y21C R127S S139R",3
"lib2","SARS-CoV-2","GAAACGCAGTATACGG",2,20.56,8.36,-2.48,0.37,1.5,1.04,0.05,">1 nonsynonymous","S43P K48V D90C N118M S200Y",5
"lib2","SARS-CoV-2","GAAACGCCACACGACA",3,100.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y119V Y159E",2
"lib2","SARS-CoV-2","GAAACGCCGGACCTAG",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S S45C N107I K128I",4
"lib2","SARS-CoV-2","GAAACGCTCCTTCAAT",9,264.26,7.75,-3.08,0.16,1.5,1.11,0.01,">1 nonsynonymous","A42T N157I",2
"lib2","SARS-CoV-2","GAAACGCTGGTTACGC",4,1.09,NA,NA,NA,NA,NA,NA,"stop","Y50* T85A F126A",3
"lib2","SARS-CoV-2","GAAACGGAATATTACC",1,0.1,NA,NA,NA,NA,NA,NA,"stop","F8* D59F Y91N T140*",4
"lib2","SARS-CoV-2","GAAACGGACACGTGGA",7,4.73,NA,NA,NA,NA,NA,NA,"stop","L125R Y143*",2
"lib2","SARS-CoV-2","GAAACGGGAAAATGCA",4,170.98,10.85,0.01,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAACGGTATCAAGCA",3,16.27,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8N G101C",2
"lib2","SARS-CoV-2","GAAACGGTTCCAGCTA",4,74.56,10.75,-0.08,0.05,2.93,1.09,0,"1 nonsynonymous","S164Y",1
"lib2","SARS-CoV-2","GAAACGTAACTTAATG",19,149.35,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6N V77P",2
"lib2","SARS-CoV-2","GAAACGTGAGACCAAT",10,118.87,6,-4.84,0.82,1.5,1.18,0.01,">1 nonsynonymous","N1R D34S K87G Y159R",4
"lib2","SARS-CoV-2","GAAACGTGGAACCAAT",12,4.72,NA,NA,NA,NA,NA,NA,"stop","F62* Y91*",2
"lib2","SARS-CoV-2","GAAACGTTGACTAATA",23,8.2,NA,NA,NA,NA,NA,NA,"stop","L5T F47T I104S D112H A145* Y175R",6
"lib2","SARS-CoV-2","GAAACTAACCTTAACA",6,57.61,8.39,-2.44,0.1,2.04,1.12,0,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","GAAACTAACTAGTCCT",15,139.3,9.42,-1.41,0.08,2.2,1.06,0,">1 nonsynonymous","T46F F62V Q144Y",3
"lib2","SARS-CoV-2","GAAACTACAACTTTTT",2,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S V103R",2
"lib2","SARS-CoV-2","GAAACTACATCGACCC",3,142.91,10.67,-0.17,0.06,2.79,1.11,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","GAAACTACCAAAGTGT",13,104.14,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V52N L60A D90K R124H",4
"lib2","SARS-CoV-2","GAAACTACCCCCTTAC",1,2.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","GAAACTACCCTTTCCA",12,0.73,NA,NA,NA,NA,NA,NA,"stop","L5* G101L Y119L",3
"lib2","SARS-CoV-2","GAAACTACCTCCCCTA",5,12.69,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","G86R P96F V103R",3
"lib2","SARS-CoV-2","GAAACTACGTCCGCGG",1,43.99,10.34,-0.5,0.11,2.39,1.11,0.01,">1 nonsynonymous","N1A N13R",2
"lib2","SARS-CoV-2","GAAACTACTGGTTCAG",5,11.99,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","R124C E154D",2
"lib2","SARS-CoV-2","GAAACTACTTAGGATC",10,19.14,9.47,-1.37,0.12,1.9,1.08,0.01,"1 nonsynonymous","N13P",1
"lib2","SARS-CoV-2","GAAACTATACCATACG",6,320.2,8.74,-2.1,0.06,2.5,1.09,0,">1 nonsynonymous","N58G Y119K Y178Q",3
"lib2","SARS-CoV-2","GAAACTATGCACCCGA",7,104.34,10.64,-0.2,0.04,2.94,1.05,0,"1 nonsynonymous","N4I",1
"lib2","SARS-CoV-2","GAAACTCAACCAACCA",1,21.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5F V32S Y50S T148M Q168R S184F S200P",7
"lib2","SARS-CoV-2","GAAACTCCCTAACCAC",9,127.51,10.45,-0.39,0.04,2.88,1.05,0,"1 nonsynonymous","F44P",1
"lib2","SARS-CoV-2","GAAACTCGACGAGACT",2,2.02,NA,NA,NA,NA,NA,NA,"stop","N58* A81S E141Y Y159M",4
"lib2","SARS-CoV-2","GAAACTCGATTAATTT",1,107.61,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60T G86I I142T",3
"lib2","SARS-CoV-2","GAAACTCTAATCTAAT",14,214.23,10.67,-0.16,0.03,2.98,1.03,0,">1 nonsynonymous","S53P C61A",2
"lib2","SARS-CoV-2","GAAACTCTCGAACACG",5,76.83,10.06,-0.78,0.05,2.52,1.05,0,">1 nonsynonymous","N24Y S164V",2
"lib2","SARS-CoV-2","GAAACTCTCGACCGAG",9,19.38,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P54G Q79L V103L",3
"lib2","SARS-CoV-2","GAAACTCTCGGCTGGT",6,44.32,10.73,-0.11,0.06,2.9,1.08,0,">1 nonsynonymous","N4T D90A",2
"lib2","SARS-CoV-2","GAAACTCTGCAATGTA",16,95.12,7.04,-3.8,0.3,1.5,1.1,0.02,">1 nonsynonymous","P7T Y165C",2
"lib2","SARS-CoV-2","GAAACTGAAAATGTAA",2,0.6,NA,NA,NA,NA,NA,NA,"stop","V103* I138L G152P V173E R179L",5
"lib2","SARS-CoV-2","GAAACTGAAACAAGCA",1,5.79,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N92P D97L R136L",3
"lib2","SARS-CoV-2","GAAACTGAACCAATAC",1,134.04,10.51,-0.33,0.03,2.9,1.07,0,">1 nonsynonymous","P133A N171S",2
"lib2","SARS-CoV-2","GAAACTGACTGCTAGT",1,6.44,10.23,-0.6,0.26,2.74,1,0.01,">1 nonsynonymous","C31L F62V S147R K198N",4
"lib2","SARS-CoV-2","GAAACTGAGCCCCCTT",7,37.08,6.23,-4.6,0.87,1.5,1.2,0.04,">1 nonsynonymous","N107S S139C P149R A190P T201V",5
"lib2","SARS-CoV-2","GAAACTGCATAAAAAG",2,45.3,9.68,-1.16,0.07,2.81,1.15,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","GAAACTGCCAAATTTG",7,31.2,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A33N D68W P82S P177S L183K",5
"lib2","SARS-CoV-2","GAAACTGCCCCCATCT",1,17.27,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37L P96K A105D G117K K132M",5
"lib2","SARS-CoV-2","GAAACTGGCCAATATT",3,48.6,10.61,-0.22,0.04,3,1.02,0,">1 nonsynonymous","T3G C61M",2
"lib2","SARS-CoV-2","GAAACTGGCTCATCTT",1,14.77,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","L95M D112G P133T A190T",4
"lib2","SARS-CoV-2","GAAACTGGGCTCCCGA",11,48.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L D90K",2
"lib2","SARS-CoV-2","GAAACTGGGGCATCGA",2,15.31,10.87,0.03,0.25,2.58,1,0.02,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","GAAACTGGTCCTTTGA",6,49.61,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K94V Y121E P149H",3
"lib2","SARS-CoV-2","GAAACTGTCAATCGTA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72R P82M S113T",3
"lib2","SARS-CoV-2","GAAACTTAATATACGT",6,63.8,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","P7S Y93D V103G D112F N120M K198V",6
"lib2","SARS-CoV-2","GAAACTTACTCACATC",4,63.99,8.95,-1.89,0.09,2.29,1.03,0,">1 nonsynonymous","T15V T55V K87Q N130D",4
"lib2","SARS-CoV-2","GAAACTTAGTCTCCAA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R F62N L95S S129M E141S Y178W",6
"lib2","SARS-CoV-2","GAAACTTATGCTGGGA",7,124.35,6.69,-4.15,0.22,1.5,1.1,0.01,">1 nonsynonymous","C6S Y39K S129K Q176L",4
"lib2","SARS-CoV-2","GAAACTTCAACGATCA",11,231.68,9.98,-0.86,0.03,2.84,1.04,0,">1 nonsynonymous","T3K E135S T170S",3
"lib2","SARS-CoV-2","GAAACTTCCGAAGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91* D98F N151D",3
"lib2","SARS-CoV-2","GAAACTTCCGCTTTCC",9,15.59,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2D D98Q C150M V180K S184P",5
"lib2","SARS-CoV-2","GAAACTTCCTATCCAT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","C6W K94T N151*",3
"lib2","SARS-CoV-2","GAAACTTGAATAATTG",7,117.83,9.37,-1.47,0.06,2.94,1.08,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","GAAACTTTATTTTACA",5,111.13,10.76,-0.08,0.03,2.99,1.01,0,">1 nonsynonymous","T3L S29R",2
"lib2","SARS-CoV-2","GAAACTTTTATAAAAA",1,117.85,9.93,-0.91,0.07,2.47,1.06,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","GAAACTTTTCCAGGGA",6,132.66,9.31,-1.53,0.04,2.89,1.08,0,">1 nonsynonymous","T55M S113C",2
"lib2","SARS-CoV-2","GAAACTTTTCTATCTA",5,9.77,NA,NA,NA,NA,NA,NA,"stop","G9T L131* Y143L",3
"lib2","SARS-CoV-2","GAAACTTTTTCGAAGT",3,44.37,9.17,-1.67,0.14,1.91,1.03,0.01,">1 nonsynonymous","S41T S45I C61A T148F N151Y",5
"lib2","SARS-CoV-2","GAAACTTTTTCTGTCA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","Y50I Q84D T100* W106* N120A",5
"lib2","SARS-CoV-2","GAAACTTTTTTACTTT",1,8.62,9.92,-0.91,0.08,3,1,0,">1 nonsynonymous","C31L P149S",2
"lib2","SARS-CoV-2","GAAAGAAACACCAAAC",3,1.16,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib2","SARS-CoV-2","GAAAGAAACAGTACAT",4,210.64,10.84,0.01,0.04,2.95,1.07,0,">1 nonsynonymous","L5T T100I",2
"lib2","SARS-CoV-2","GAAAGAAAGCCCAGTT",7,37.95,9.61,-1.22,0.1,2.04,1.07,0,">1 nonsynonymous","I2K P54C A89I L122R",4
"lib2","SARS-CoV-2","GAAAGAAAGGTATTGA",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I G101D",2
"lib2","SARS-CoV-2","GAAAGAAATACCTTAA",4,14.1,10.57,-0.27,0.09,2.85,1.15,0,"1 nonsynonymous","A42N",1
"lib2","SARS-CoV-2","GAAAGAAATGTGAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L G83R Y175L",3
"lib2","SARS-CoV-2","GAAAGAACAACTTATA",5,135,8.63,-2.2,0.07,2.75,1.07,0,">1 nonsynonymous","Y119P E135V",2
"lib2","SARS-CoV-2","GAAAGAACAAGTTTGA",5,31.88,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I28V G117N L131E",3
"lib2","SARS-CoV-2","GAAAGAACACACTGGG",10,53.64,7.21,-3.63,0.32,1.5,1.26,0.03,">1 nonsynonymous","F8K L60P",2
"lib2","SARS-CoV-2","GAAAGAACATGTTACT",20,182.48,7.52,-3.31,0.26,1.5,1.12,0.02,">1 nonsynonymous","F12L N24T S45V S139I",4
"lib2","SARS-CoV-2","GAAAGAACCAAAGCCT",1,53.5,10.67,-0.17,0.07,2.96,1.04,0,">1 nonsynonymous","K56V T201E",2
"lib2","SARS-CoV-2","GAAAGAACGGGTCTAA",5,57.6,9.31,-1.52,0.12,2.14,1.09,0.01,">1 nonsynonymous","Y121M Q144V",2
"lib2","SARS-CoV-2","GAAAGAACTTACGCGG",2,26.63,10.45,-0.39,0.06,2.93,1.09,0,">1 nonsynonymous","A14S N110Y K199S",3
"lib2","SARS-CoV-2","GAAAGAAGAACAGCCA",6,11.92,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D90V I104H S129H",3
"lib2","SARS-CoV-2","GAAAGAAGACATAATC",1,110.33,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38H D59P N109K Y119T P177S",5
"lib2","SARS-CoV-2","GAAAGAAGGACGATAC",7,74.15,10.87,0.03,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGAAGGGCTAAAC",1,2.53,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGAAGTACGACGT",2,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L K128E",2
"lib2","SARS-CoV-2","GAAAGAAGTCGATCAG",7,123.82,9.76,-1.08,0.04,2.93,1.07,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","GAAAGAAGTGATCACT",18,55.19,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I2E S53F V65Y A105D T201S",5
"lib2","SARS-CoV-2","GAAAGAAGTGCCTATA",1,0,NA,NA,NA,NA,NA,NA,"stop","L95* K199W",2
"lib2","SARS-CoV-2","GAAAGAATAAACGAAA",9,93.21,8.19,-2.64,0.14,1.75,1.1,0.01,">1 nonsynonymous","K26G G146T",2
"lib2","SARS-CoV-2","GAAAGAATAACGCAGA",8,1.27,NA,NA,NA,NA,NA,NA,"stop","G9* R16L C61G F156T",4
"lib2","SARS-CoV-2","GAAAGAATAATACAAT",4,72.25,10.83,0,0.06,2.88,1.1,0,">1 nonsynonymous","A42R N64V",2
"lib2","SARS-CoV-2","GAAAGAATACTATTAT",7,103.37,10.83,-0.01,0.07,2.86,1.16,0,"1 nonsynonymous","F160N",1
"lib2","SARS-CoV-2","GAAAGAATAGTCCTAC",5,63.81,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","R25T G51C G101F",3
"lib2","SARS-CoV-2","GAAAGAATCAATTACC",16,56.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T55S A67F V103F",3
"lib2","SARS-CoV-2","GAAAGAATCTTCCCAA",8,209.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4I F12V N64W G117S S139L Y165R",6
"lib2","SARS-CoV-2","GAAAGAATGAGACGCT",2,6.42,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S43N G51P V103H R136L",4
"lib2","SARS-CoV-2","GAAAGAATGCGAAAAT",4,5.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F44I Y50I P149Q",4
"lib2","SARS-CoV-2","GAAAGACAAAATTATA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Y Y121V L131R T201S",4
"lib2","SARS-CoV-2","GAAAGACACACACCTA",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44G K94W N110L Q144C F160L",5
"lib2","SARS-CoV-2","GAAAGACACCCTAACT",4,30.85,6,-4.84,1.77,1.5,1.21,0.02,">1 nonsynonymous","N24T S36M L111Y N157I",4
"lib2","SARS-CoV-2","GAAAGACACTCAAATC",9,64.01,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N107I K128T T140P N151K N157G",5
"lib2","SARS-CoV-2","GAAAGACATGAAATAC",4,1.24,NA,NA,NA,NA,NA,NA,"stop","A22D E76* L122V R179F",4
"lib2","SARS-CoV-2","GAAAGACATTGGACAT",8,133.31,10.16,-0.68,0.02,2.87,1.08,0,">1 nonsynonymous","S29W T46M K87M",3
"lib2","SARS-CoV-2","GAAAGACCAGAGTATG",1,13.66,NA,NA,NA,NA,NA,NA,"stop","N4V T15* Y121L D137Q",4
"lib2","SARS-CoV-2","GAAAGACCCAAATGAC",1,22.36,8.99,-1.85,0.13,1.81,1.17,0.01,">1 nonsynonymous","F99W V103M",2
"lib2","SARS-CoV-2","GAAAGACGAACCAAAA",1,60.64,9.87,-0.96,0.07,2.17,1.03,0,">1 nonsynonymous","N4M E10W",2
"lib2","SARS-CoV-2","GAAAGACTGTGATATG",10,3.06,NA,NA,NA,NA,NA,NA,"stop","S69* G86L T100M S184T",4
"lib2","SARS-CoV-2","GAAAGAGAACAATCGC",5,53.88,10.42,-0.42,0.06,2.98,1.03,0,">1 nonsynonymous","G9L T140A",2
"lib2","SARS-CoV-2","GAAAGAGAACTCCCAC",5,0.08,NA,NA,NA,NA,NA,NA,"stop","F8* N13H A42W K87N Y121C",5
"lib2","SARS-CoV-2","GAAAGAGACAAATTAT",11,113.17,9.75,-1.08,0.09,2.34,1.04,0,">1 nonsynonymous","Y21V L38Y I138L",3
"lib2","SARS-CoV-2","GAAAGAGACATTAAAT",7,35.17,9.84,-1,0.35,1.5,1.14,0.07,">1 nonsynonymous","T15R K48N A105S L162G",4
"lib2","SARS-CoV-2","GAAAGAGAGGGGCGAT",4,127.31,10.7,-0.14,0.04,2.97,1.04,0,">1 nonsynonymous","L60K D90Q T201L",3
"lib2","SARS-CoV-2","GAAAGAGATCCACGGT",4,29.38,10.87,0.04,0.06,3,1.02,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","GAAAGAGATTTCTATA",6,93.68,10.86,0.02,0.04,2.96,1.06,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","GAAAGAGCAATAAGAC",2,11,9.67,-1.16,0.11,2.56,1.16,0.01,">1 nonsynonymous","K114M Y121L L162V",3
"lib2","SARS-CoV-2","GAAAGAGCCAAAGAAA",9,80.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P82K T85M R127L V180N",4
"lib2","SARS-CoV-2","GAAAGATAAAGGTAAA",11,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N D97P V103D",3
"lib2","SARS-CoV-2","GAAAGATACACATGAT",3,22.42,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y93N P149T",2
"lib2","SARS-CoV-2","GAAAGATACCCCGGTG",2,65.62,10.74,-0.1,0.06,2.91,1.08,0,"1 nonsynonymous","F134N",1
"lib2","SARS-CoV-2","GAAAGATACGTTAACC",11,200.58,10.36,-0.48,0.03,2.9,1.05,0,"1 nonsynonymous","F17M",1
"lib2","SARS-CoV-2","GAAAGATCAATACAAA",5,129.7,10.13,-0.71,0.07,2.49,1.02,0,">1 nonsynonymous","V11T K128V",2
"lib2","SARS-CoV-2","GAAAGATCATGTTGCA",2,18.21,6,-4.84,2,1.5,1.27,0.08,">1 nonsynonymous","G86Q V103L",2
"lib2","SARS-CoV-2","GAAAGATCGAGATTAG",5,36.89,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","D75T I142A Y165K",3
"lib2","SARS-CoV-2","GAAAGATGAGCAATGT",1,10.64,6,-4.84,2,1.5,1.07,0,"1 nonsynonymous","V20Q",1
"lib2","SARS-CoV-2","GAAAGATGATGTATAA",11,35.38,6.84,-4,0.22,1.64,1.12,0.01,">1 nonsynonymous","F12L C49M A81S D90S",4
"lib2","SARS-CoV-2","GAAAGATGCAGTTCCT",4,10,6.72,-4.11,0.53,1.5,1.06,0.05,">1 nonsynonymous","N92Y K198S",2
"lib2","SARS-CoV-2","GAAAGATTAAGAAACT",8,110.06,10.79,-0.04,0.05,2.99,1.03,0,">1 nonsynonymous","I2E D97G",2
"lib2","SARS-CoV-2","GAAAGATTAATAGTAT",3,32.02,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N4E A22V L38S L162K",4
"lib2","SARS-CoV-2","GAAAGATTCCTGGATA",2,2.36,NA,NA,NA,NA,NA,NA,"stop","A14T G83N F99P I104M L125* P169R",6
"lib2","SARS-CoV-2","GAAAGATTCGTTGACG",1,41.44,10.79,-0.04,0.04,3,1.02,0,"1 nonsynonymous","D59Y",1
"lib2","SARS-CoV-2","GAAAGCAAAATTACCT",4,35.24,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","L57V N64F I80S",3
"lib2","SARS-CoV-2","GAAAGCACCTATACCA",6,7.11,NA,NA,NA,NA,NA,NA,"stop","G9K A42F K56* P169*",4
"lib2","SARS-CoV-2","GAAAGCACTAATAGTA",15,129.06,10.32,-0.52,0.04,2.9,1.02,0,">1 nonsynonymous","T3M D98V",2
"lib2","SARS-CoV-2","GAAAGCAGCAAGATAG",2,44.57,10.85,0.01,0.05,2.94,1.09,0,">1 nonsynonymous","D97V V173L",2
"lib2","SARS-CoV-2","GAAAGCAGCCCTACCA",10,138.09,10.81,-0.03,0.04,2.92,1.08,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GAAAGCAGTACTTACC",12,82.62,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T55I K87Y L95D",3
"lib2","SARS-CoV-2","GAAAGCATAACAGATG",11,17.84,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13F F99I W106R",3
"lib2","SARS-CoV-2","GAAAGCATATTTTTTA",2,34.52,10.82,-0.02,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGCATCATAGTAC",7,206.57,10.86,0.03,0.04,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GAAAGCATGATTACAT",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69E P96T G101A A145S G152D Y159I K198N",7
"lib2","SARS-CoV-2","GAAAGCATTGAAAAAA",3,104.21,10.85,0.01,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGCCAAAACAAAC",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46S F99Q",2
"lib2","SARS-CoV-2","GAAAGCCAACTTTAGA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","D68* V153S G174W",3
"lib2","SARS-CoV-2","GAAAGCCAAGACAAAT",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20P D98A L131M P161D",4
"lib2","SARS-CoV-2","GAAAGCCCCCAAAAAG",5,1.23,NA,NA,NA,NA,NA,NA,"stop","I28W G51D I104* G155E",4
"lib2","SARS-CoV-2","GAAAGCCCTTAAATAC",1,24.22,10.83,-0.01,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGCCGGAGGATTC",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F F12K P82S",3
"lib2","SARS-CoV-2","GAAAGCCGGATCCTAG",2,8.93,6.38,-4.45,0.14,1.5,1,0,">1 nonsynonymous","E10I Y50V L95V",3
"lib2","SARS-CoV-2","GAAAGCCTAAGTACAT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","N1M Y35A C49R T55F F62T Y121V S139*",7
"lib2","SARS-CoV-2","GAAAGCCTACAAGCGT",10,48.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14Y P82R F99K",3
"lib2","SARS-CoV-2","GAAAGCGAAGTAATCC",9,0.75,NA,NA,NA,NA,NA,NA,"stop","A81* Y119W",2
"lib2","SARS-CoV-2","GAAAGCGACAGCCCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","GAAAGCGCTTATGACA",1,56.98,8.96,-1.88,0.07,2.86,1.07,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","GAAAGCTAATAGACGG",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V D112G E141V S164R",4
"lib2","SARS-CoV-2","GAAAGCTAGAACTGCA",3,31.65,10.71,-0.12,0.07,2.99,1,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","GAAAGCTCAAGTCCAA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17I F47K N58L G116T",4
"lib2","SARS-CoV-2","GAAAGCTCAATATTAT",9,107.16,8.17,-2.67,0.16,1.5,1.13,0.01,">1 nonsynonymous","D98A Y178E",2
"lib2","SARS-CoV-2","GAAAGCTCCATGATCA",12,343.94,10.78,-0.05,0.02,2.92,1.07,0,">1 nonsynonymous","N1R S41N S139R",3
"lib2","SARS-CoV-2","GAAAGCTGCCATATTT",9,11.88,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","F99Y A105S V182G",3
"lib2","SARS-CoV-2","GAAAGGAAGAATGTAT",3,64.59,10.09,-0.75,0.05,2.9,1.02,0,">1 nonsynonymous","L5A N120K Q144F",3
"lib2","SARS-CoV-2","GAAAGGAAGGGAGAAT",3,1.99,NA,NA,NA,NA,NA,NA,"stop","I2L T15Y V37* L57M S129E",5
"lib2","SARS-CoV-2","GAAAGGACTTTAAGAC",2,35.04,8.25,-2.58,0.23,1.5,1.16,0.02,">1 nonsynonymous","L38M L60S Q84T G155Y",4
"lib2","SARS-CoV-2","GAAAGGACTTTGTTCA",1,8.07,9.44,-1.4,0.17,1.92,1.04,0.01,">1 nonsynonymous","V77R S129F",2
"lib2","SARS-CoV-2","GAAAGGATATTGTATG",1,0.33,NA,NA,NA,NA,NA,NA,"stop","A105S R136*",2
"lib2","SARS-CoV-2","GAAAGGCAAATCCACC",3,15,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","Y143Q C158V F185A",3
"lib2","SARS-CoV-2","GAAAGGCAACTAAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28M V37S P96H W106L N130*",5
"lib2","SARS-CoV-2","GAAAGGCACAAAGGTA",10,96.79,9.16,-1.68,0.1,1.78,1.12,0,">1 nonsynonymous","Y21T N120L K198W",3
"lib2","SARS-CoV-2","GAAAGGCACACTTACA",8,31.17,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V20L G51A T100Y S200Y",4
"lib2","SARS-CoV-2","GAAAGGCAGTGTTCCG",20,3.18,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib2","SARS-CoV-2","GAAAGGCCAGTTCATC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","V32* N64I",2
"lib2","SARS-CoV-2","GAAAGGCGAATTAGAT",8,51.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57M A89W S139I",3
"lib2","SARS-CoV-2","GAAAGGCGACAGACTT",1,35,10.95,0.11,0.09,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGGCGATAGCAGC",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L D75V K87S A105G",4
"lib2","SARS-CoV-2","GAAAGGCTCTCATAAA",3,31.47,8.42,-2.41,0.19,1.67,1.07,0.02,">1 nonsynonymous","W106K L125H Y143I",3
"lib2","SARS-CoV-2","GAAAGGCTCTCATTAA",1,13.92,9.49,-1.35,0.17,2.03,1.05,0.01,">1 nonsynonymous","A14H D90S E141V",3
"lib2","SARS-CoV-2","GAAAGGCTGAACATAT",6,21.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70L I104V R124S",3
"lib2","SARS-CoV-2","GAAAGGCTTCCCACCT",1,0.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87Y",1
"lib2","SARS-CoV-2","GAAAGGGAACAATTAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S29L S36L Y123* F134T",4
"lib2","SARS-CoV-2","GAAAGGGATCCATTAA",5,93.98,10.91,0.07,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGGGATTCAGTAG",5,62.47,10.82,-0.02,0.06,2.94,1.08,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GAAAGGTAAATGTCCA",8,31.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K D90C V103A T201I",4
"lib2","SARS-CoV-2","GAAAGGTAACGGCCGA",16,319.04,10.83,-0.01,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGGTAAGACAAGC",9,100.83,9.53,-1.31,0.08,1.98,1.07,0,">1 nonsynonymous","F126L S139I",2
"lib2","SARS-CoV-2","GAAAGGTATCTGAAAT",11,499.47,6,-4.84,1.48,1.5,1.13,0,">1 nonsynonymous","L5H Y119W N157K",3
"lib2","SARS-CoV-2","GAAAGGTCACTAAGAT",6,53.73,8.14,-2.7,0.12,1.71,1.02,0.01,">1 nonsynonymous","I88L Y119L",2
"lib2","SARS-CoV-2","GAAAGGTCATACAAGT",2,61.5,10.27,-0.56,0.05,2.86,1.08,0,"1 nonsynonymous","I142P",1
"lib2","SARS-CoV-2","GAAAGGTGGTAGGTAA",2,20.73,6.39,-4.45,0.76,1.5,1.14,0.05,">1 nonsynonymous","T63V A89F F99E",3
"lib2","SARS-CoV-2","GAAAGGTTACATCCTA",1,24.08,9.67,-1.17,0.18,1.92,1.07,0.02,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","GAAAGGTTTCATGATA",11,146.21,10.84,0,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGGTTTTGACAGA",7,81.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83N N107S S129P I138R",4
"lib2","SARS-CoV-2","GAAAGTAAACTGTACG",7,21.57,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N13S F44T I88N",3
"lib2","SARS-CoV-2","GAAAGTAAGATGAAGT",13,111.31,8.6,-2.24,0.07,1.8,1.06,0,">1 nonsynonymous","I2S L60S I142L Y165W",4
"lib2","SARS-CoV-2","GAAAGTAAGGAAAACT",4,5.19,NA,NA,NA,NA,NA,NA,"stop","T3* N107W",2
"lib2","SARS-CoV-2","GAAAGTAAGTCGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","GAAAGTAATCTTCCCC",7,19.5,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C49S T63N P82M D112V",4
"lib2","SARS-CoV-2","GAAAGTAATGAGAATA",5,68.41,10.1,-0.74,0.04,2.77,1.03,0,">1 nonsynonymous","A42T E135M I142L",3
"lib2","SARS-CoV-2","GAAAGTAATGTAATAA",4,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L T15W D97L",3
"lib2","SARS-CoV-2","GAAAGTACAAAACCAT",5,72.81,9.88,-0.96,0.09,2.41,1.05,0,">1 nonsynonymous","F99M E141S",2
"lib2","SARS-CoV-2","GAAAGTACGAGCACTG",3,33.71,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V32R N58K Y91C K114Y S139R T201K",6
"lib2","SARS-CoV-2","GAAAGTACGCATTAGA",7,132.57,10.83,0,0.06,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAAGTACTTTGAAAC",4,24.32,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","F44A P82N T140S G155T K198L",5
"lib2","SARS-CoV-2","GAAAGTAGAAAATAAA",9,157.65,7.48,-3.36,0.1,2.02,1.13,0,">1 nonsynonymous","P54I C150G",2
"lib2","SARS-CoV-2","GAAAGTAGAACGAGAG",7,140.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K56S T63R N118G Q144V G152S F160D",6
"lib2","SARS-CoV-2","GAAAGTAGCATGAGAA",4,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V I88C P96L K114L S164H V182D",6
"lib2","SARS-CoV-2","GAAAGTAGTCGAAGGG",2,64.9,9.57,-1.27,0.07,2.83,1,0,">1 nonsynonymous","K114A I142K",2
"lib2","SARS-CoV-2","GAAAGTATAAAGAATC",5,31.03,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F62C A81C F167Y G174L",4
"lib2","SARS-CoV-2","GAAAGTATAACAAAGA",6,35.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20A K94W",2
"lib2","SARS-CoV-2","GAAAGTATGAAGAGTC",3,18.45,8.4,-2.44,0.29,1.5,1,0.03,">1 nonsynonymous","T55N G83Q I104V Y178S L183F",5
"lib2","SARS-CoV-2","GAAAGTATGTTAATGC",7,21.3,8.59,-2.24,0.33,1.5,1.03,0.05,">1 nonsynonymous","C49F N107R",2
"lib2","SARS-CoV-2","GAAAGTATTATCGAGT",1,10.23,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","T46N K128R L162A",3
"lib2","SARS-CoV-2","GAAAGTCAAAATAAGC",1,1.34,NA,NA,NA,NA,NA,NA,"stop","I2* Q144W L183C",3
"lib2","SARS-CoV-2","GAAAGTCAACCCAAAT",4,47.45,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T63A A81V I88Y Y119S F167R",5
"lib2","SARS-CoV-2","GAAAGTCACACAGTCT",5,38.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35E C49V Q176S",3
"lib2","SARS-CoV-2","GAAAGTCAGGACCCTT",5,210.64,9.51,-1.33,0.06,2.42,1.05,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","GAAAGTCATAAAATAG",4,22.11,10.28,-0.55,0.13,2.48,1.12,0.01,">1 nonsynonymous","F44T K56I T201V",3
"lib2","SARS-CoV-2","GAAAGTCCATTACCCG",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* N120M P161L",3
"lib2","SARS-CoV-2","GAAAGTCCCTTGCCAT",13,24.49,6.77,-4.06,0.53,1.5,1.16,0.03,">1 nonsynonymous","Q84M F99Y A105P",3
"lib2","SARS-CoV-2","GAAAGTCCGAGTACAT",3,37.03,10.45,-0.38,0.08,2.95,1.1,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","GAAAGTCGATTGCGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L60P P177* A192V",3
"lib2","SARS-CoV-2","GAAAGTCTAGTTGTTA",5,33.93,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C49F Y93F Y143V C158Y V173S V181C P191N",7
"lib2","SARS-CoV-2","GAAAGTCTGAAGTTTA",1,25.64,8.54,-2.3,0.26,1.66,1.19,0.03,">1 nonsynonymous","S19T L122I I142L T170S",4
"lib2","SARS-CoV-2","GAAAGTGAGTAGCTAG",8,24.77,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","D98Y A105L",2
"lib2","SARS-CoV-2","GAAAGTGAGTTGCTCC",12,100.8,9.48,-1.36,0.18,1.5,1.07,0.01,">1 nonsynonymous","L60K G83D D98M",3
"lib2","SARS-CoV-2","GAAAGTGATTGCGGGA",2,6.71,6.38,-4.45,0.94,1.5,1.29,0.03,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","GAAAGTGCCCGGCACA",9,80.32,10.46,-0.38,0.04,2.87,1.05,0,">1 nonsynonymous","S41K E141R",2
"lib2","SARS-CoV-2","GAAAGTGCTAACAACA",10,66.02,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R16K L95M D97C P161H",4
"lib2","SARS-CoV-2","GAAAGTGGATTTAAAA",7,41.34,10.27,-0.57,0.05,2.86,1.07,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GAAAGTGGGCCGAATG",2,11.84,6.31,-4.53,0.73,1.5,1.11,0.03,">1 nonsynonymous","P54R R124T",2
"lib2","SARS-CoV-2","GAAAGTGTATACTAAT",9,56.8,8.33,-2.5,0.33,1.5,1,0.05,">1 nonsynonymous","D112L E135V",2
"lib2","SARS-CoV-2","GAAAGTGTGTAAGAAC",2,53.94,10.23,-0.61,0.03,2.94,1.03,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","GAAAGTTAAGCTCACC",2,17.11,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","D68Q Y178M",2
"lib2","SARS-CoV-2","GAAAGTTAGTATGATA",9,16.36,6.84,-3.99,0.48,1.5,1.17,0.04,">1 nonsynonymous","T3C N40L T46M T55M T63L V65F D90N Y121G",8
"lib2","SARS-CoV-2","GAAAGTTCAAAGGGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","G51* N130S",2
"lib2","SARS-CoV-2","GAAAGTTCGAACAGAT",1,6.59,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","P82G",1
"lib2","SARS-CoV-2","GAAAGTTCGCATTACA",8,96.95,9.24,-1.59,0.07,2.02,1.05,0,">1 nonsynonymous","T15G G155V",2
"lib2","SARS-CoV-2","GAAAGTTCTCGTTCGA",3,14.7,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D90V C102N F167M",3
"lib2","SARS-CoV-2","GAAAGTTTAAATACAA",13,193.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Q176H F185S",2
"lib2","SARS-CoV-2","GAAAGTTTAGCTTTTA",2,45.45,10.68,-0.15,0.06,2.92,1.04,0,">1 nonsynonymous","G9E T15I",2
"lib2","SARS-CoV-2","GAAATAAAAGGGCCTC",6,69.08,10.21,-0.63,0.05,2.85,1.07,0,">1 nonsynonymous","T15R R78S A105T Q163C",4
"lib2","SARS-CoV-2","GAAATAAAATACCTAA",2,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S N92G A105R",3
"lib2","SARS-CoV-2","GAAATAAACAATAATA",5,30.1,10.73,-0.11,0.04,2.99,1.03,0,">1 nonsynonymous","S29G S43A",2
"lib2","SARS-CoV-2","GAAATAAACTCAACGC",8,47.24,6,-4.84,1.85,1.5,1.06,0,">1 nonsynonymous","C6V L60M V65L D137E",4
"lib2","SARS-CoV-2","GAAATAAAGAATCATC",5,0.06,NA,NA,NA,NA,NA,NA,"stop","I2H T63* P82R Y91V",4
"lib2","SARS-CoV-2","GAAATAAAGAATTATG",4,0.5,NA,NA,NA,NA,NA,NA,"stop","N64L W106* R127S",3
"lib2","SARS-CoV-2","GAAATAAAGACTCAAA",1,16.93,9.72,-1.12,0.09,2.66,1.04,0,">1 nonsynonymous","G155V S184W",2
"lib2","SARS-CoV-2","GAAATAAATAACACAT",3,32.9,10.32,-0.52,0.06,2.88,1.01,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","GAAATAAATACCCCGA",2,7.94,8.33,-2.51,0.32,1.5,1,0.04,">1 nonsynonymous","F12R C61K Y121L",3
"lib2","SARS-CoV-2","GAAATAAATCATAGGC",1,25.38,8.31,-2.53,0.18,1.96,1.06,0.01,">1 nonsynonymous","D97F G146V",2
"lib2","SARS-CoV-2","GAAATAAATCTGCGCA",1,63.33,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37N A89R R179I",3
"lib2","SARS-CoV-2","GAAATAAATGCAACAC",1,7.36,9.55,-1.29,0.16,2.88,1,0,"1 nonsynonymous","G74R",1
"lib2","SARS-CoV-2","GAAATAACAGAGACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","I28L N64K Y93* L188T",4
"lib2","SARS-CoV-2","GAAATAACATAAAAGC",6,89.36,8.78,-2.06,0.06,2.95,1.08,0,">1 nonsynonymous","L60K S113A F156R P169Y",4
"lib2","SARS-CoV-2","GAAATAACCATAAATT",4,0.17,NA,NA,NA,NA,NA,NA,"stop","V37K W106V I142*",3
"lib2","SARS-CoV-2","GAAATAACCGATCATT",1,8.02,6,-4.84,1.92,3,1.07,0.02,">1 nonsynonymous","C49Y V115G G152F",3
"lib2","SARS-CoV-2","GAAATAACGTAATATA",2,30.97,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","R16S S36L Y66H F126S G146P F156I",6
"lib2","SARS-CoV-2","GAAATAACTATAGCAT",10,135.04,10.69,-0.15,0.04,2.89,1.09,0,">1 nonsynonymous","A42S N109R",2
"lib2","SARS-CoV-2","GAAATAACTATCCTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D R16K W106V E135S T201K",5
"lib2","SARS-CoV-2","GAAATAACTTATGATT",3,21.83,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F8S D59Q E76R N118K S200V",5
"lib2","SARS-CoV-2","GAAATAAGCAGGACGA",3,23.03,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","E10C D90T L162R V180G",4
"lib2","SARS-CoV-2","GAAATAAGCCCAATGG",4,104.58,10.36,-0.48,0.05,2.85,1.07,0,">1 nonsynonymous","I104T T201K",2
"lib2","SARS-CoV-2","GAAATAAGCGGTTTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","W106* P149F",2
"lib2","SARS-CoV-2","GAAATAAGGTATGTAT",8,165.13,10.86,0.02,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATAAGTGGGGGAG",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E G51S V181K",3
"lib2","SARS-CoV-2","GAAATAATAAATTCTC",2,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105I Y119T",2
"lib2","SARS-CoV-2","GAAATAATAATCTTCT",7,21.73,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y93C E141C",2
"lib2","SARS-CoV-2","GAAATAATAGTCACAT",3,61.86,10.78,-0.05,0.07,2.95,1.07,0,"1 nonsynonymous","Y39N",1
"lib2","SARS-CoV-2","GAAATAATATCATCCA",9,23.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C49H Y119V",2
"lib2","SARS-CoV-2","GAAATAATCGTTAATT",4,34.95,10.56,-0.28,0.05,2.81,1.16,0,"1 nonsynonymous","K94N",1
"lib2","SARS-CoV-2","GAAATAATTACGCTAA",5,14.6,6.81,-4.03,0.18,1.84,1.13,0.01,">1 nonsynonymous","C6V N40T G116W Y123M",4
"lib2","SARS-CoV-2","GAAATAATTTTAAGAG",10,89.04,8.08,-2.76,0.13,1.5,1.15,0.01,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","GAAATACAAACACCCT",3,11.47,6,-4.84,2,3,1.05,0,">1 nonsynonymous","F44R V103I N120R R127W",4
"lib2","SARS-CoV-2","GAAATACAAACCTCAA",4,71.69,10.51,-0.33,0.05,2.99,1.01,0,">1 nonsynonymous","T100Y P169V",2
"lib2","SARS-CoV-2","GAAATACAAATGCAAA",7,62.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56Q S113D Y121C C158R",4
"lib2","SARS-CoV-2","GAAATACAACCAGCTT",2,32.36,10.72,-0.12,0.07,2.89,1.1,0,">1 nonsynonymous","N1R C195F",2
"lib2","SARS-CoV-2","GAAATACAACGCAGTG",2,27.67,10.83,-0.01,0.08,2.92,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATACAATCTCACT",13,255.47,10.54,-0.29,0.05,2.89,1.06,0,">1 nonsynonymous","Y39H T100Q V153K H189L",4
"lib2","SARS-CoV-2","GAAATACAATTTACAC",11,72.09,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L5S G86N F99P",3
"lib2","SARS-CoV-2","GAAATACACATACTTA",6,184.27,10.76,-0.07,0.04,2.89,1.11,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","GAAATACACTTCATCT",5,153.91,10.54,-0.29,0.03,2.91,1.06,0,">1 nonsynonymous","G51S T100M",2
"lib2","SARS-CoV-2","GAAATACATAAATCAA",3,55.39,10.59,-0.25,0.05,2.92,1.01,0,">1 nonsynonymous","S41L C61Y",2
"lib2","SARS-CoV-2","GAAATACATGTGCCAA",5,0.44,NA,NA,NA,NA,NA,NA,"stop","T55S Y121R T148*",3
"lib2","SARS-CoV-2","GAAATACCACTACACT",10,5.75,NA,NA,NA,NA,NA,NA,"stop","T85R A89V Y93* Q176H",4
"lib2","SARS-CoV-2","GAAATACCATTCATGT",5,0,NA,NA,NA,NA,NA,NA,"stop","F12N G166V Y175* S184T",4
"lib2","SARS-CoV-2","GAAATACCCTAAAGTA",4,5.96,6.06,-4.77,1.13,1.5,1.32,0.05,">1 nonsynonymous","P54S D90F F99W T140S G155P",5
"lib2","SARS-CoV-2","GAAATACCGCTAATAA",1,21.82,8.59,-2.24,0.21,1.5,1,0.02,">1 nonsynonymous","S53N D90S Y165R",3
"lib2","SARS-CoV-2","GAAATACCTTGATCGT",2,45.31,10.43,-0.41,0.05,2.96,1.07,0,">1 nonsynonymous","I138L A145S P149L",3
"lib2","SARS-CoV-2","GAAATACGACCGACTA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","L5F S41K T55* S69M Y119* G146A",6
"lib2","SARS-CoV-2","GAAATACGGGTAGCAT",5,161.55,9.96,-0.87,0.06,2.27,1.03,0,">1 nonsynonymous","N40L V52L D59E V182I",4
"lib2","SARS-CoV-2","GAAATACGTACCTTCG",16,1.18,NA,NA,NA,NA,NA,NA,"stop","A105* V173S",2
"lib2","SARS-CoV-2","GAAATACGTGGTCCAT",6,32.21,9.76,-1.08,0.09,2.02,1.08,0,">1 nonsynonymous","Q84R P96R",2
"lib2","SARS-CoV-2","GAAATACTATAAGAAG",12,1.65,NA,NA,NA,NA,NA,NA,"stop","N40D I88D T140*",3
"lib2","SARS-CoV-2","GAAATACTCCCATCCC",6,0.8,NA,NA,NA,NA,NA,NA,"stop","I28* F99S G146D N171C",4
"lib2","SARS-CoV-2","GAAATACTCTTATAAT",3,14.3,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","GAAATACTGGGGACGA",2,72.34,10.94,0.1,0.06,2.91,1.11,0,">1 nonsynonymous","Y35W D97M",2
"lib2","SARS-CoV-2","GAAATACTGTAGTTGA",5,59.61,10.71,-0.13,0.03,2.92,1.09,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","GAAATACTTGATCCAT",2,48.69,9.62,-1.22,0.11,1.7,1.07,0.01,">1 nonsynonymous","L5W W23P S139G",3
"lib2","SARS-CoV-2","GAAATACTTTTGATAA",2,2.81,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAAATAGAAAAGACGA",1,7.34,10.27,-0.57,0.06,3,1.01,0,"1 nonsynonymous","Q163E",1
"lib2","SARS-CoV-2","GAAATAGAAAGAGAAA",4,44.34,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V11Y F70K",2
"lib2","SARS-CoV-2","GAAATAGAGAACCAAA",9,240.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5P N24M D90Y Y175G",4
"lib2","SARS-CoV-2","GAAATAGATACTGTCT",3,95.24,10.13,-0.71,0.04,2.87,1.03,0,">1 nonsynonymous","S41K G116I A192T",3
"lib2","SARS-CoV-2","GAAATAGATTGTATTT",4,54.57,10.78,-0.05,0.05,2.94,1.06,0,">1 nonsynonymous","C61R K198R",2
"lib2","SARS-CoV-2","GAAATAGCGGAGCGAT",2,14.97,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","I88W K94Y Q168K",3
"lib2","SARS-CoV-2","GAAATAGCGGCCTAAC",10,42.45,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","S41I T85K R179W",3
"lib2","SARS-CoV-2","GAAATAGCTGTACAAA",2,9.06,10.55,-0.29,0.38,2.6,1.1,0.04,">1 nonsynonymous","A14R S69E K132T",3
"lib2","SARS-CoV-2","GAAATAGGAAATAATG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D L122K S139L T201A",4
"lib2","SARS-CoV-2","GAAATAGGGCGTAAGT",12,221.1,10.48,-0.36,0.04,2.94,1.05,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","GAAATAGGTTCGATTG",7,13.53,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","C49N S113R",2
"lib2","SARS-CoV-2","GAAATAGTCATATCGA",10,199.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F17P S36C I88S P96Q I138P T201Q",6
"lib2","SARS-CoV-2","GAAATAGTGAGGGGAC",4,13.91,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L95W N107V G116F I142Y",4
"lib2","SARS-CoV-2","GAAATAGTTAAATTCG",1,2.39,NA,NA,NA,NA,NA,NA,"stop","R27K S113L P149*",3
"lib2","SARS-CoV-2","GAAATAGTTCTGGTAA",13,224.15,10.23,-0.6,0.03,2.81,1.05,0,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","GAAATATAAAACAATA",1,0.77,NA,NA,NA,NA,NA,NA,"stop","E10N R27L G83*",3
"lib2","SARS-CoV-2","GAAATATAAACGTAAT",6,5.78,NA,NA,NA,NA,NA,NA,"stop","R27T D59V V65* Y93P",4
"lib2","SARS-CoV-2","GAAATATAAGCTTAAA",8,125.39,10.7,-0.13,0.03,2.99,1.02,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","GAAATATAAGTCACAG",2,70.52,10.86,0.02,0.05,2.87,1.15,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","GAAATATAATAATCAG",6,40.88,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D98S V103C S129P P169E",4
"lib2","SARS-CoV-2","GAAATATAATGTACTA",6,3.3,NA,NA,NA,NA,NA,NA,"stop","S43K P96* G116F E186A",4
"lib2","SARS-CoV-2","GAAATATACGCGAACT",7,176.46,10.85,0.01,0.04,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATATACTTAATTT",3,1.02,NA,NA,NA,NA,NA,NA,"stop","V11Q T46C K132C Q168*",4
"lib2","SARS-CoV-2","GAAATATAGGGTACCA",6,118.94,9.81,-1.03,0.07,2.53,1.09,0,">1 nonsynonymous","F8C A42R T85K P197C",4
"lib2","SARS-CoV-2","GAAATATATCTACGAT",19,75.26,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D59Y Y93M S113T S129D",4
"lib2","SARS-CoV-2","GAAATATATGACGTTT",6,8.51,NA,NA,NA,NA,NA,NA,"stop","I104* S113C Q163E G174A",4
"lib2","SARS-CoV-2","GAAATATATTAAAGAC",3,25.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I104K P177Y",2
"lib2","SARS-CoV-2","GAAATATCCATGAAAA",5,24.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G83N F99H W106Y E141H",4
"lib2","SARS-CoV-2","GAAATATCCATGGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63A S69V",2
"lib2","SARS-CoV-2","GAAATATCCTGTATAA",12,1.13,NA,NA,NA,NA,NA,NA,"stop","I2* P133K",2
"lib2","SARS-CoV-2","GAAATATCTTAGATAT",3,1.1,NA,NA,NA,NA,NA,NA,"stop","F8E S36C D137Q P149* L183I",5
"lib2","SARS-CoV-2","GAAATATGCATCAAAA",5,31.88,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F70Q E154V",2
"lib2","SARS-CoV-2","GAAATATGCTGTCAAG",3,62.67,10.88,0.04,0.06,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GAAATATTAATGACAC",21,196.7,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","E10A G86F K128D S139Y",4
"lib2","SARS-CoV-2","GAAATATTAGGGTGAG",4,19.51,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N4A G51R G86V L95Q N110M L122M",6
"lib2","SARS-CoV-2","GAAATATTATAAACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T55S N64H D98* P177A",4
"lib2","SARS-CoV-2","GAAATATTCAACCTAA",4,16.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10I D34I G74K N107S F160N K199T",6
"lib2","SARS-CoV-2","GAAATCAAAACACTTA",2,1.18,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib2","SARS-CoV-2","GAAATCAAACTTACCG",1,12.36,9.96,-0.88,0.08,2.11,1.01,0,">1 nonsynonymous","N4C F62L G83S D98E",4
"lib2","SARS-CoV-2","GAAATCAAATGCCAGA",10,6.22,NA,NA,NA,NA,NA,NA,"stop","S41G I104C D112N Y121* A145E",5
"lib2","SARS-CoV-2","GAAATCAAATGGGTAA",2,51.4,9.08,-1.76,0.07,2.9,1.04,0,">1 nonsynonymous","N1Y I72L Y119F",3
"lib2","SARS-CoV-2","GAAATCAAGCAGAACC",3,7.82,9.46,-1.38,0.21,1.81,1,0.02,">1 nonsynonymous","S29W T63S S139L",3
"lib2","SARS-CoV-2","GAAATCACAAACATAA",2,47.86,6.79,-4.05,0.16,1.52,1.11,0.01,">1 nonsynonymous","I2H C158L",2
"lib2","SARS-CoV-2","GAAATCACAAGAAACT",1,37.88,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N30T N92R",2
"lib2","SARS-CoV-2","GAAATCACCCGTTTGC",2,17.27,10.83,-0.01,0.11,2.78,1.26,0,">1 nonsynonymous","G9A K132S",2
"lib2","SARS-CoV-2","GAAATCACGCATCCCA",1,10.57,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A89R R179A",2
"lib2","SARS-CoV-2","GAAATCACTGCCATTA",4,1.12,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","GAAATCAGAGCCCACG",3,60.02,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35G C61A G86R Y119M P197A",5
"lib2","SARS-CoV-2","GAAATCAGGACGATTC",1,10.99,9.95,-0.88,0.09,2.97,1.03,0,">1 nonsynonymous","I2L A89S S164L",3
"lib2","SARS-CoV-2","GAAATCATAGTATGGG",2,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103G D112Y G117L",3
"lib2","SARS-CoV-2","GAAATCATCACCAACA",7,69.22,8.67,-2.17,0.13,2.09,1.09,0.01,">1 nonsynonymous","P54V E135W Y159W",3
"lib2","SARS-CoV-2","GAAATCATCGCAACGC",5,64.03,10.59,-0.25,0.09,2.71,1.08,0,">1 nonsynonymous","N13Y Q84M",2
"lib2","SARS-CoV-2","GAAATCATGCAATACA",10,63.68,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S45V G86R",2
"lib2","SARS-CoV-2","GAAATCATTTGGATTA",12,0.92,NA,NA,NA,NA,NA,NA,"stop","V103* Y159A",2
"lib2","SARS-CoV-2","GAAATCCAACGACACG",7,30.75,10.89,0.05,0.04,2.9,1.09,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","GAAATCCAAGTCAAAT",2,11.63,10.08,-0.76,0.28,2.51,1.13,0.02,">1 nonsynonymous","C61P Y123S F185L P197A",4
"lib2","SARS-CoV-2","GAAATCCAATCTTGAC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","S53W P82A F160W T201*",4
"lib2","SARS-CoV-2","GAAATCCACACGCACG",7,64.32,8.09,-2.75,0.16,1.68,1.1,0.01,">1 nonsynonymous","W23H K87N G155S",3
"lib2","SARS-CoV-2","GAAATCCACCAAAAAA",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N R27W F99C G146L L183N",5
"lib2","SARS-CoV-2","GAAATCCAGTACTGAG",2,29.26,10.52,-0.32,0.08,2.79,1.12,0,">1 nonsynonymous","E141S P149F",2
"lib2","SARS-CoV-2","GAAATCCGAACATTAT",5,26.37,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N1K E10V F62H G86V V103R N109T T201R",7
"lib2","SARS-CoV-2","GAAATCCGGGCGGTCA",5,0,NA,NA,NA,NA,NA,NA,"stop","T15R Y93* K114Q Q144I V173D",5
"lib2","SARS-CoV-2","GAAATCCTAATACAAA",3,16.03,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6T V181H",2
"lib2","SARS-CoV-2","GAAATCCTACTCTTAC",5,47.91,7.93,-2.9,0.15,1.5,1.01,0.01,">1 nonsynonymous","L57Q N109H Y119S",3
"lib2","SARS-CoV-2","GAAATCCTATTTCTAA",4,43.15,6.89,-3.94,0.47,1.5,1.11,0.05,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","GAAATCGACAACCATT",5,274.53,10.54,-0.29,0.04,2.88,1.04,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","GAAATCGCGATGTTCT",3,13.41,9.96,-0.88,0.15,2.89,1,0.01,">1 nonsynonymous","Y35C G116Q",2
"lib2","SARS-CoV-2","GAAATCGGTGCAATCG",3,28.21,10.8,-0.04,0.06,2.99,1.01,0,">1 nonsynonymous","R78T P197Q",2
"lib2","SARS-CoV-2","GAAATCGTGCTAACAT",3,18.52,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","N92I W106R",2
"lib2","SARS-CoV-2","GAAATCTAAATTGCCT",3,8.21,NA,NA,NA,NA,NA,NA,"stop","Q84K F99*",2
"lib2","SARS-CoV-2","GAAATCTAACTTGCAT",6,39.87,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5Y V77R N92Q A105C",4
"lib2","SARS-CoV-2","GAAATCTACCAAGGAA",5,29.42,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K56M N107W R136Q",3
"lib2","SARS-CoV-2","GAAATCTAGAACTTGC",3,43.23,10.82,-0.01,0.08,2.87,1.14,0,"1 nonsynonymous","T201D",1
"lib2","SARS-CoV-2","GAAATCTAGGACAAAA",8,25.12,9.78,-1.06,0.1,2.17,1.02,0,">1 nonsynonymous","A22S A89H",2
"lib2","SARS-CoV-2","GAAATCTCTGGGTGAG",1,22.9,6,-4.84,2,2.21,1.16,0.01,">1 nonsynonymous","I28G A67Y D90I",3
"lib2","SARS-CoV-2","GAAATCTGATGCTCAT",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y I104G",2
"lib2","SARS-CoV-2","GAAATCTGATTTCGTG",1,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M G51A G117F T148Y",4
"lib2","SARS-CoV-2","GAAATCTTAGAAGCAA",3,17.96,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N24F L38R S53G L122M D137T",5
"lib2","SARS-CoV-2","GAAATCTTGAGGCTGG",1,12.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","E10A C102L Q176H",3
"lib2","SARS-CoV-2","GAAATCTTGATCACTT",7,95.4,10.6,-0.24,0.02,2.95,1.03,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","GAAATGAAAAGACTAT",3,1.6,NA,NA,NA,NA,NA,NA,"stop","I28S T63L L131A S139* F160G E186N",6
"lib2","SARS-CoV-2","GAAATGAAACGCTAGT",4,24.45,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","G51D K94L I104K G152P",4
"lib2","SARS-CoV-2","GAAATGAAACGTATAT",11,257.95,10.71,-0.12,0.04,2.89,1.1,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","GAAATGAAATTACCTG",4,35.98,9.44,-1.39,0.1,2.02,1.08,0,">1 nonsynonymous","T15N Y21V D97V",3
"lib2","SARS-CoV-2","GAAATGAATATAATCC",3,63.68,10.05,-0.78,0.06,2.64,1.03,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GAAATGAATTAAGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5T G9* I28Q I88*",4
"lib2","SARS-CoV-2","GAAATGACAAATAATA",3,8.61,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T3A N40V T63P I88V I104D N157I F185I",7
"lib2","SARS-CoV-2","GAAATGACCACTTGAC",3,9.71,6.32,-4.52,2,1.5,1.12,0.01,">1 nonsynonymous","F8H I28F A105R C150W Y159V T201C",6
"lib2","SARS-CoV-2","GAAATGACTCTTTCCG",5,29.19,6.42,-4.42,0.48,2.31,1.25,0.02,">1 nonsynonymous","E10V D90I S139A S200V",4
"lib2","SARS-CoV-2","GAAATGAGATCTACTA",9,261.91,9.58,-1.26,0.02,2.96,1.06,0,">1 nonsynonymous","C61R G166V",2
"lib2","SARS-CoV-2","GAAATGATTAAAACAT",1,26.35,8.43,-2.41,0.21,2.69,1.09,0.01,">1 nonsynonymous","S41F G166E",2
"lib2","SARS-CoV-2","GAAATGCACCATGTCT",4,81.38,9.69,-1.15,0.1,2.2,1.05,0,">1 nonsynonymous","A18K Y91A",2
"lib2","SARS-CoV-2","GAAATGCACCGTCCCG",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R A42N Y143K",3
"lib2","SARS-CoV-2","GAAATGCACTAAATCG",8,75.68,10.76,-0.08,0.04,2.98,1.03,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","GAAATGCAGCCACTTA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","D68* V103A",2
"lib2","SARS-CoV-2","GAAATGCATCAAAGAC",10,165.4,10.15,-0.68,0.06,2.7,1.01,0,">1 nonsynonymous","D34R T63S",2
"lib2","SARS-CoV-2","GAAATGCCAACTTGTC",1,20.53,7.45,-3.38,0.35,1.5,1,0.03,">1 nonsynonymous","I2E V37R T55K F99T",4
"lib2","SARS-CoV-2","GAAATGCCAATAAGCA",10,70.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38P I88N K94E K132L",4
"lib2","SARS-CoV-2","GAAATGCCTAGTATTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V D90I",2
"lib2","SARS-CoV-2","GAAATGCCTTGCCCTT",3,39.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49H S108P Y175E L188Y",4
"lib2","SARS-CoV-2","GAAATGCGAAATAACC",9,155.09,10.21,-0.63,0.07,2.7,1.02,0,"1 nonsynonymous","P133F",1
"lib2","SARS-CoV-2","GAAATGCTCCATTACG",4,61.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19E V37C Q84W N157I H189R",5
"lib2","SARS-CoV-2","GAAATGCTTACGAATC",9,78.81,9.72,-1.12,0.04,2.77,1.12,0,">1 nonsynonymous","F62L K132Y E154L T201K",4
"lib2","SARS-CoV-2","GAAATGGACGCAGTAG",22,143.77,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3S Y39H T55C Y93L G116N G172F",6
"lib2","SARS-CoV-2","GAAATGGAGCAACCAT",3,9.41,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6I Q84P",2
"lib2","SARS-CoV-2","GAAATGGATAGCACTT",5,159.27,6.01,-4.83,0.72,1.5,1.17,0.01,">1 nonsynonymous","F8V K56G F156S Q176A",4
"lib2","SARS-CoV-2","GAAATGGATCCGAGTT",1,0.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4H",1
"lib2","SARS-CoV-2","GAAATGGCATTAAACG",1,39.18,9.95,-0.88,0.1,2.71,1.07,0,">1 nonsynonymous","V32T Y91S",2
"lib2","SARS-CoV-2","GAAATGGCATTCCACT",2,9.97,9.61,-1.23,0.28,2.78,1.09,0.02,">1 nonsynonymous","V115N Q144Y",2
"lib2","SARS-CoV-2","GAAATGGCGACAACAA",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W T63R G86S P133R",4
"lib2","SARS-CoV-2","GAAATGGGCAAATAAG",3,36.93,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L57S D68K N157W",3
"lib2","SARS-CoV-2","GAAATGGTACGTTACC",4,124.27,9.88,-0.96,0.07,2.47,1.04,0,">1 nonsynonymous","C6F G9L C61T A105T",4
"lib2","SARS-CoV-2","GAAATGGTTTAAAACA",5,51.53,10.52,-0.31,0.06,2.9,1.01,0,">1 nonsynonymous","E141I H189Y",2
"lib2","SARS-CoV-2","GAAATGGTTTCAATGC",10,0.69,NA,NA,NA,NA,NA,NA,"stop","L122A K198*",2
"lib2","SARS-CoV-2","GAAATGTAATTAATCT",1,38.63,8.44,-2.4,0.11,1.59,1.13,0.01,">1 nonsynonymous","C6S A22K S29T T85L G152N",5
"lib2","SARS-CoV-2","GAAATGTACACAGGAA",8,52.6,10.88,0.04,0.04,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATGTAGAGGCCGC",9,24.41,9.27,-1.56,0.15,1.5,1.07,0.02,">1 nonsynonymous","W23Y V52G",2
"lib2","SARS-CoV-2","GAAATGTCATAGCAAC",8,119.47,10.82,-0.02,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATGTGAAACGTAC",11,209.73,10.28,-0.56,0.04,2.26,1.01,0,">1 nonsynonymous","N40F Y123W",2
"lib2","SARS-CoV-2","GAAATGTGAGAGAAAA",8,222.77,10.25,-0.59,0.03,2.83,1.05,0,">1 nonsynonymous","G9Q D34R F160S",3
"lib2","SARS-CoV-2","GAAATGTGCGACGACT",11,133.43,10.85,0.02,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GAAATGTGTATCAAAT",6,114.69,10.87,0.03,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATGTGTGCACTAA",4,40.18,10.94,0.11,0.05,2.82,1.16,0,"1 nonsynonymous","K199S",1
"lib2","SARS-CoV-2","GAAATGTTAATCCAAA",3,28.09,10.36,-0.47,0.06,2.9,1.07,0,">1 nonsynonymous","F12V S43V",2
"lib2","SARS-CoV-2","GAAATGTTACGCTAAA",4,26.56,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F99P F134T",2
"lib2","SARS-CoV-2","GAAATGTTTCATAGTT",10,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y N13T S41D G155L P191S",5
"lib2","SARS-CoV-2","GAAATGTTTGAAATTC",10,183.57,9.05,-1.79,0.06,2.53,1.1,0,">1 nonsynonymous","R25S K87Q N120D",3
"lib2","SARS-CoV-2","GAAATGTTTTGAAATG",2,18.85,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","C31L F99S N107D Y121E",4
"lib2","SARS-CoV-2","GAAATTAAAACTATTA",6,115.08,10.83,0,0.04,2.93,1.07,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GAAATTAAACCAATAG",4,60.82,10.83,0,0.04,3,1.01,0,">1 nonsynonymous","V77L L122R S129V",3
"lib2","SARS-CoV-2","GAAATTAACGCAAGCT",1,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A67L",2
"lib2","SARS-CoV-2","GAAATTAAGAGACCGA",5,15.71,10.66,-0.17,0.05,3,1.02,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","GAAATTAATTTCAAGT",3,78.76,10.46,-0.37,0.05,3,1.01,0,">1 nonsynonymous","V103I K114C",2
"lib2","SARS-CoV-2","GAAATTACACAAAAGG",4,42.23,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K48V F99P N107M N171L",4
"lib2","SARS-CoV-2","GAAATTACATATTATA",3,25.89,10.8,-0.03,0.13,2.69,1.31,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATTACCAACAATT",2,5.02,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K26Q V71Y Y91F",3
"lib2","SARS-CoV-2","GAAATTACCTGTCGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","S69* S139Y F156A L183*",4
"lib2","SARS-CoV-2","GAAATTACGTTGCAAA",10,106.88,10.71,-0.12,0.04,2.98,1.03,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","GAAATTACTAAAACTT",8,168.06,10.81,-0.03,0.04,2.91,1.11,0,">1 nonsynonymous","D59E K132M",2
"lib2","SARS-CoV-2","GAAATTACTAAAGGTC",12,159.42,9.4,-1.44,0.08,2.63,1.05,0,">1 nonsynonymous","C6G A14M K114N",3
"lib2","SARS-CoV-2","GAAATTAGAATAAGGA",4,13.87,10.45,-0.38,0.08,2.92,1,0,">1 nonsynonymous","I2A T15F",2
"lib2","SARS-CoV-2","GAAATTAGAGATCTAT",6,29.59,9.88,-0.96,0.06,2.66,1.11,0,">1 nonsynonymous","T63F D90L",2
"lib2","SARS-CoV-2","GAAATTAGAGGAGTTT",3,33.73,6.1,-4.74,1.19,1.5,1.24,0.03,">1 nonsynonymous","S53N D59W C150T",3
"lib2","SARS-CoV-2","GAAATTATAAAAATAC",16,244.24,8.7,-2.14,0.08,2.87,1.1,0,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","GAAATTATAGAGAACA",4,5.3,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P54T D59N R136I Y143N",4
"lib2","SARS-CoV-2","GAAATTATCCTGCGGC",6,9.47,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","C61I T63V R124S G174L",4
"lib2","SARS-CoV-2","GAAATTATTCTAAGAG",4,77.82,10.02,-0.81,0.08,2.65,1.01,0,"1 nonsynonymous","F12W",1
"lib2","SARS-CoV-2","GAAATTCGCAGCCAGC",6,0.91,NA,NA,NA,NA,NA,NA,"stop","E10W T46* I80V",3
"lib2","SARS-CoV-2","GAAATTCGTTTCAGGT",7,34.81,7.12,-3.71,0.35,1.5,1.18,0.02,">1 nonsynonymous","V103K V115L",2
"lib2","SARS-CoV-2","GAAATTCTTCCGGATG",9,4.41,NA,NA,NA,NA,NA,NA,"stop","S19I F156*",2
"lib2","SARS-CoV-2","GAAATTGACAACAACC",7,2.69,NA,NA,NA,NA,NA,NA,"stop","Y143M G155R Q163*",3
"lib2","SARS-CoV-2","GAAATTGACAATAAAA",5,34.93,10.09,-0.75,0.13,2.73,1,0.01,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","GAAATTGACAGAAAAA",1,17.13,9.35,-1.49,0.17,1.74,1.17,0.02,"1 nonsynonymous","Y21G",1
"lib2","SARS-CoV-2","GAAATTGACTACTACA",9,4.61,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib2","SARS-CoV-2","GAAATTGATAATTTAT",7,246.71,10.79,-0.04,0.03,2.97,1.05,0,"1 nonsynonymous","S53R",1
"lib2","SARS-CoV-2","GAAATTGCACAAATTG",7,157.09,10.14,-0.69,0.05,2.39,1.02,0,">1 nonsynonymous","P54V K132P S139D",3
"lib2","SARS-CoV-2","GAAATTGCGCGAGGCA",4,62.71,10.84,0.01,0.07,2.93,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAATTGCTGGTTCAC",2,15.95,9.44,-1.39,0.12,2.73,1.06,0.01,">1 nonsynonymous","C6N N58P",2
"lib2","SARS-CoV-2","GAAATTGGAATAACAA",16,178.73,6.84,-4,0.13,1.66,1.15,0,">1 nonsynonymous","S29F Y143M G155C",3
"lib2","SARS-CoV-2","GAAATTGGAATATCCC",2,17.48,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N4D N92Q F185P",3
"lib2","SARS-CoV-2","GAAATTGGAGTTTAAA",1,22.07,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I2L F8A D68E T201V",4
"lib2","SARS-CoV-2","GAAATTGGCACCATCC",13,0.87,NA,NA,NA,NA,NA,NA,"stop","N13M V37M F160P G172*",4
"lib2","SARS-CoV-2","GAAATTGTAACATTTA",6,0.2,NA,NA,NA,NA,NA,NA,"stop","I104V G116V G174*",3
"lib2","SARS-CoV-2","GAAATTGTAGATCCAC",4,1.57,NA,NA,NA,NA,NA,NA,"stop","Y39K G74* T85M Y91I W106C N120M S129G",7
"lib2","SARS-CoV-2","GAAATTGTTTTCAAAC",2,17.11,10.74,-0.1,0.07,2.95,1.03,0,">1 nonsynonymous","Y35L P149L",2
"lib2","SARS-CoV-2","GAAATTTAAGTAAAGT",11,44.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R27A T85W C102Q I142R",4
"lib2","SARS-CoV-2","GAAATTTATCAACAAC",5,54.56,10.75,-0.09,0.03,2.96,1.05,0,"1 nonsynonymous","K87Y",1
"lib2","SARS-CoV-2","GAAATTTCATATCACC",1,0,NA,NA,NA,NA,NA,NA,"stop","L5K S19*",2
"lib2","SARS-CoV-2","GAAATTTCCAGTCAAC",8,48.33,7.65,-3.19,0.28,1.5,1.26,0.03,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","GAAATTTCTACATGGA",8,0.79,NA,NA,NA,NA,NA,NA,"stop","G9F S36* P54C C61V T85S Y119S Q163V",7
"lib2","SARS-CoV-2","GAAATTTCTGAGCAAC",5,32.78,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C61L L95K C158W V173S",4
"lib2","SARS-CoV-2","GAAATTTGAAAAAAGC",5,106.67,10.86,0.02,0.04,2.96,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GAAATTTTAAATCTCT",2,6.64,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","E10D P96C V103R",3
"lib2","SARS-CoV-2","GAAATTTTCATTTTCG",11,95.36,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Q79P F160V",2
"lib2","SARS-CoV-2","GAACAAAAAACTCGAC",3,0.31,NA,NA,NA,NA,NA,NA,"stop","G146* T201D",2
"lib2","SARS-CoV-2","GAACAAAAAAGAAAGT",9,18.96,NA,NA,NA,NA,NA,NA,"stop","G172*",1
"lib2","SARS-CoV-2","GAACAAAAAGCTAACA",8,91.9,10.84,0,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACAAAAATACAAAA",9,50.16,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F44S S53Y L60Y F99Y G117N Q163E",6
"lib2","SARS-CoV-2","GAACAAAAATTCAATA",1,28.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34E G51T P177S T201Q",4
"lib2","SARS-CoV-2","GAACAAAACAAACTTG",6,61.25,10.72,-0.12,0.05,2.88,1.13,0,">1 nonsynonymous","S36L A190E",2
"lib2","SARS-CoV-2","GAACAAAACAGAAGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3C Q84* N151T",3
"lib2","SARS-CoV-2","GAACAAAACATAATGA",3,7.95,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","P7H W106P D112H A190G",4
"lib2","SARS-CoV-2","GAACAAAACCTCGCAC",8,4.34,NA,NA,NA,NA,NA,NA,"stop","R16H N118Y L183*",3
"lib2","SARS-CoV-2","GAACAAAACGACTTCT",7,6.11,NA,NA,NA,NA,NA,NA,"stop","K48* F70A G86C",3
"lib2","SARS-CoV-2","GAACAAAACTAGTAAA",2,41.07,10.43,-0.41,0.06,2.7,1,0,">1 nonsynonymous","T3W S41R S139D",3
"lib2","SARS-CoV-2","GAACAAAATTCGATAA",9,34.91,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C49F K94C S184L",3
"lib2","SARS-CoV-2","GAACAAACATGAATCA",5,117.72,10.82,-0.01,0.06,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GAACAAACCGACTTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S29E P82T K114I N120*",4
"lib2","SARS-CoV-2","GAACAAACTTCTAAGG",3,28.15,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","GAACAAAGAAGTGGTC",9,115.76,10.79,-0.05,0.05,2.87,1.1,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","GAACAAAGAGATAGGT",3,7.09,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAACAAAGGACTGATA",5,120.54,10.2,-0.64,0.03,2.87,1.05,0,">1 nonsynonymous","F44R C61I",2
"lib2","SARS-CoV-2","GAACAAAGTAAAGAGA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","Y50* C61P",2
"lib2","SARS-CoV-2","GAACAAAGTGCCGTAG",1,32.81,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I88T P161Q",2
"lib2","SARS-CoV-2","GAACAAAGTGGAAGTA",3,9.15,6,-4.84,2,1.5,1.13,0.07,">1 nonsynonymous","L60R L95R",2
"lib2","SARS-CoV-2","GAACAAAGTTAATAAA",2,18.52,10.39,-0.44,0.07,2.78,1,0,">1 nonsynonymous","T3C L95M",2
"lib2","SARS-CoV-2","GAACAAATCATCAGTT",1,23.84,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","G9K P82D G86L Y119D P149K",5
"lib2","SARS-CoV-2","GAACAAATGTAGAACG",9,94.46,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F62E R73T S129L D137S",4
"lib2","SARS-CoV-2","GAACAACAAAAAAATT",3,20.04,6.39,-4.44,0.72,1.85,1.21,0.05,">1 nonsynonymous","L38I V77I Y121R P169R",4
"lib2","SARS-CoV-2","GAACAACACAGCCCAA",9,182.18,9.98,-0.85,0.06,2.48,1.04,0,">1 nonsynonymous","N30W V52W K198S",3
"lib2","SARS-CoV-2","GAACAACACGGTAATT",2,16.14,8.29,-2.55,0.26,1.5,1.01,0.03,">1 nonsynonymous","F17L G155V",2
"lib2","SARS-CoV-2","GAACAACACTAGCTTT",5,88.65,10.8,-0.04,0.05,3,1.04,0,">1 nonsynonymous","T15S S36A",2
"lib2","SARS-CoV-2","GAACAACAGAAAACAC",14,283.84,10.13,-0.71,0.03,2.89,1,0,">1 nonsynonymous","C6L A42G",2
"lib2","SARS-CoV-2","GAACAACAGAACTTTT",6,29.66,10.46,-0.38,0.05,2.99,1.01,0,">1 nonsynonymous","L5V Y39L N151I L188W",4
"lib2","SARS-CoV-2","GAACAACAGGTCTGTT",2,30.01,10.69,-0.15,0.06,2.94,1.05,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","GAACAACATAAGCGTA",1,23.65,9.58,-1.25,0.14,2.17,1.02,0.01,">1 nonsynonymous","T15R D90A L95M T100L",4
"lib2","SARS-CoV-2","GAACAACATCAAAAAA",5,47.06,10.79,-0.04,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACAACATCGCTGAA",9,0.2,NA,NA,NA,NA,NA,NA,"stop","N1E C49M K199*",3
"lib2","SARS-CoV-2","GAACAACCAACTCATA",1,35.94,10.85,0.01,0.04,2.95,1.06,0,"1 nonsynonymous","Y66F",1
"lib2","SARS-CoV-2","GAACAACCATACCAAT",3,20.52,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y66G D90N C102I R136K",4
"lib2","SARS-CoV-2","GAACAACCTGCAGCGT",2,46.15,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P96L K128V E135R C150N",4
"lib2","SARS-CoV-2","GAACAACGAGACTTGA",4,2.06,NA,NA,NA,NA,NA,NA,"stop","C6Y L60C S108*",3
"lib2","SARS-CoV-2","GAACAACGCTATCAAT",7,86.67,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D90Q N107I G117E",3
"lib2","SARS-CoV-2","GAACAACTAAAACGTG",4,0,NA,NA,NA,NA,NA,NA,"stop","L5Y D34V N64T D90H P96S A105Y Y119Q T148*",8
"lib2","SARS-CoV-2","GAACAACTACTACTAA",5,76.83,6.05,-4.78,0.93,1.5,1.2,0.02,">1 nonsynonymous","V71S E154G T201D",3
"lib2","SARS-CoV-2","GAACAACTGAACGAAT",6,124.85,8.35,-2.49,0.14,1.5,1.1,0.01,">1 nonsynonymous","Y165L H189F K198S",3
"lib2","SARS-CoV-2","GAACAACTGTTCACCT",3,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T L183Q",2
"lib2","SARS-CoV-2","GAACAAGAAAATTTCT",11,40.25,6,-4.84,1.08,1.5,1.12,0.01,">1 nonsynonymous","S19V N92M Y175F",3
"lib2","SARS-CoV-2","GAACAAGAAAGTGCAA",9,48.43,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","V180N",1
"lib2","SARS-CoV-2","GAACAAGAACTATAAC",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7D S113V",2
"lib2","SARS-CoV-2","GAACAAGACGAATCAA",13,12.99,NA,NA,NA,NA,NA,NA,"stop","C31S G172*",2
"lib2","SARS-CoV-2","GAACAAGACTACTTAT",20,126.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83V K94E D112N E154Q",4
"lib2","SARS-CoV-2","GAACAAGATAGTTACC",1,23.46,8.92,-1.91,0.13,2.29,1.12,0.01,">1 nonsynonymous","A33V L111H G146Y T201R",4
"lib2","SARS-CoV-2","GAACAAGATCAAAAAG",6,205.6,9.62,-1.22,0.02,2.93,1.06,0,">1 nonsynonymous","C61I F126V N151C",3
"lib2","SARS-CoV-2","GAACAAGCAATTCCGA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67Y G83I",2
"lib2","SARS-CoV-2","GAACAAGCGCGCCTAC",4,11.5,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","F62L P96G N118S L162Y",4
"lib2","SARS-CoV-2","GAACAAGCTAGACAAA",5,19.32,7.95,-2.88,0.45,1.5,1.03,0.07,">1 nonsynonymous","C6P F12V W106H",3
"lib2","SARS-CoV-2","GAACAAGGCTGAACAC",3,582.18,8.19,-2.65,0.09,1.5,1.06,0,">1 nonsynonymous","T15H Y121I Y178C",3
"lib2","SARS-CoV-2","GAACAAGTAATTTTCC",8,176.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83N E135V P177S",3
"lib2","SARS-CoV-2","GAACAAGTTTAACCGC",11,266.18,10.49,-0.35,0.04,2.87,1.08,0,"1 nonsynonymous","A22L",1
"lib2","SARS-CoV-2","GAACAATAAGAAACCC",1,10.03,9.75,-1.09,0.07,3,1.03,0,">1 nonsynonymous","D90N T170K",2
"lib2","SARS-CoV-2","GAACAATAAGAATGGA",4,40.04,10.16,-0.67,0.06,2.83,1,0,">1 nonsynonymous","T3L E10C",2
"lib2","SARS-CoV-2","GAACAATAATAAAAAC",3,7.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V L188V",2
"lib2","SARS-CoV-2","GAACAATAGACTGACA",18,146.08,6,-4.84,1.55,1.5,1.13,0.01,">1 nonsynonymous","F8P K87A W106R F126T G166Q",5
"lib2","SARS-CoV-2","GAACAATAGATTATTA",4,41.91,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G83D G86Y D112L I142Q P169F",5
"lib2","SARS-CoV-2","GAACAATATGGAAGCT",16,1.94,NA,NA,NA,NA,NA,NA,"stop","V32K T55C K87E D97H L122* T170Y",6
"lib2","SARS-CoV-2","GAACAATATTACAAAA",2,18.43,7.97,-2.86,0.27,2.48,1.07,0.02,">1 nonsynonymous","N171K P197T",2
"lib2","SARS-CoV-2","GAACAATCATTGCTCT",2,10.69,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y165R G174S S184F",3
"lib2","SARS-CoV-2","GAACAATCCGACTGGA",6,8.49,NA,NA,NA,NA,NA,NA,"stop","G9Q K56L G83H G117*",4
"lib2","SARS-CoV-2","GAACAATGCTGAACAT",7,58.63,9.44,-1.4,0.09,2.14,1.05,0,">1 nonsynonymous","G9C N120V N130Y E141G",4
"lib2","SARS-CoV-2","GAACAATGGACCAGAT",1,51.88,8.23,-2.61,0.15,2.41,1.08,0.01,">1 nonsynonymous","S41V Y143S",2
"lib2","SARS-CoV-2","GAACAATTAATCTCAC",4,22.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D90L D137L F156T",3
"lib2","SARS-CoV-2","GAACAATTGGAATAAT",10,4.63,NA,NA,NA,NA,NA,NA,"stop","G9A P82* F99V",3
"lib2","SARS-CoV-2","GAACAATTTAACACTA",10,158.33,10.81,-0.03,0.03,2.91,1.1,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","GAACAATTTGGTGTCA",6,133.58,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V32I R73I Q176H",3
"lib2","SARS-CoV-2","GAACAATTTTTATGTA",2,29.96,8.53,-2.31,0.1,3,1.08,0.01,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","GAACACAAGCCAATGT",3,4.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","GAACACAAGTACCTAA",5,11.38,7.37,-3.46,0.74,1.5,1.11,0.06,">1 nonsynonymous","V103A F185S",2
"lib2","SARS-CoV-2","GAACACAATCATTGCA",13,72.17,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S69H S113R",2
"lib2","SARS-CoV-2","GAACACACACAATGTG",3,30.01,10.7,-0.14,0.16,2.81,1.04,0.01,"1 nonsynonymous","N24G",1
"lib2","SARS-CoV-2","GAACACACCCGGGATT",6,64.21,9.1,-1.73,0.15,1.6,1.05,0.01,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","GAACACAGACCGCGCG",4,81.64,11.03,0.2,0.06,2.98,1.03,0,">1 nonsynonymous","R16F N171M",2
"lib2","SARS-CoV-2","GAACACAGCGGCACTT",4,34.61,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S29W K94F N107M",3
"lib2","SARS-CoV-2","GAACACAGCTTTTCAT",7,177.67,10.77,-0.07,0.04,2.94,1.08,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","GAACACATAAGTACTT",12,80.05,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","GAACACATACATTTAC",2,14.9,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F8L V20Q D34Y N58R D90C G101V",6
"lib2","SARS-CoV-2","GAACACATGATTTAGA",4,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I T85M F99D V180T",4
"lib2","SARS-CoV-2","GAACACATGGTTAATA",2,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A V11R P54S G83C I104P N120I",6
"lib2","SARS-CoV-2","GAACACATTACACGGG",3,159.67,10.82,-0.01,0.06,2.87,1.05,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","GAACACATTCGCCAAT",8,35.16,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","L5A F99K G146Y",3
"lib2","SARS-CoV-2","GAACACCAAGGAATAA",2,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F N157W K198G",3
"lib2","SARS-CoV-2","GAACACCAATTGTCGG",4,38.81,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N13V S29T I138T Y159P K199Y",5
"lib2","SARS-CoV-2","GAACACCACTTAACTG",3,109.08,10.68,-0.16,0.03,2.97,1.03,0,">1 nonsynonymous","L5G S43P N64P",3
"lib2","SARS-CoV-2","GAACACCATATGATCC",2,22.05,10.9,0.06,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACACCCAACAGAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","I28F V71G D98N Y119F L131C N157* N171D",7
"lib2","SARS-CoV-2","GAACACCGATGAAAAA",9,122.87,6.57,-4.27,0.29,1.5,1.12,0.01,">1 nonsynonymous","L5T C158L",2
"lib2","SARS-CoV-2","GAACACCTACAAGGTC",1,43.3,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V37E I80K",2
"lib2","SARS-CoV-2","GAACACCTAGGCCTAA",2,10.71,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N92M G101N Y143P",3
"lib2","SARS-CoV-2","GAACACCTATAACGCT",1,7.24,8.98,-1.86,0.09,2.77,1.18,0,">1 nonsynonymous","K87R G174I",2
"lib2","SARS-CoV-2","GAACACGAAAAGATTT",5,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95F D98Y V103G F160L",4
"lib2","SARS-CoV-2","GAACACGCACACTTAA",12,0.11,NA,NA,NA,NA,NA,NA,"stop","V11I T55* K94L Y143L T201N",5
"lib2","SARS-CoV-2","GAACACGCGTACACAA",13,0.79,NA,NA,NA,NA,NA,NA,"stop","F99* L122*",2
"lib2","SARS-CoV-2","GAACACGGAGATTGAT",7,55.15,8.45,-2.38,0.25,1.5,1.01,0.03,">1 nonsynonymous","D34R D59M Y121M",3
"lib2","SARS-CoV-2","GAACACGGCTAAACCA",9,105.56,10.62,-0.22,0.04,2.93,1,0,">1 nonsynonymous","D97W E141H",2
"lib2","SARS-CoV-2","GAACACGGTGCCTTCT",5,0.79,NA,NA,NA,NA,NA,NA,"stop","V11* D90T W106A T148F",4
"lib2","SARS-CoV-2","GAACACGTAATATACG",13,164.74,8.39,-2.45,0.13,1.72,1.13,0.01,">1 nonsynonymous","C49S K87N L122W",3
"lib2","SARS-CoV-2","GAACACTAAGCTAAAA",4,59.43,6.28,-4.55,0.75,1.5,1.1,0.04,">1 nonsynonymous","W106V Q176V",2
"lib2","SARS-CoV-2","GAACACTACGCGGTCT",2,12.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10D N13P A18V P96K",4
"lib2","SARS-CoV-2","GAACACTATCCATTGT",10,142.42,10.78,-0.06,0.05,2.93,1.09,0,">1 nonsynonymous","S36L A42G",2
"lib2","SARS-CoV-2","GAACACTCTTTAAAAA",11,36.48,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","V77S V103G R179Y",3
"lib2","SARS-CoV-2","GAACACTGACTTTTTA",5,60.04,10.86,0.02,0.06,2.98,1.03,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GAACACTGAGAGTCAG",5,49.97,10.74,-0.1,0.05,2.89,1.14,0,"1 nonsynonymous","G83C",1
"lib2","SARS-CoV-2","GAACACTGCTAATATA",8,54.29,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T140V P149R P161V F167E S184T A190C",6
"lib2","SARS-CoV-2","GAACACTGCTGATTAT",2,33.76,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","N13K P149I N157R",3
"lib2","SARS-CoV-2","GAACACTGTTGGCCGA",9,0.34,NA,NA,NA,NA,NA,NA,"stop","N58I A89* V103S G117M T201Q",5
"lib2","SARS-CoV-2","GAACACTTATTACCTA",4,108.37,10.85,0.02,0.04,2.94,1.06,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","GAACACTTCAGCGAAT",1,7.52,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13A I88R",2
"lib2","SARS-CoV-2","GAACACTTTCATTTCC",1,14.83,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L95S Y119S",2
"lib2","SARS-CoV-2","GAACAGAAAAGCTTGG",1,9.87,6.51,-4.33,0.55,1.5,1.08,0.02,">1 nonsynonymous","I88G N120G",2
"lib2","SARS-CoV-2","GAACAGAAAGTTTATT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","I2* V65N S147C",3
"lib2","SARS-CoV-2","GAACAGAAATATTGAA",1,3.56,NA,NA,NA,NA,NA,NA,"stop","K132F S147Y N171H G172* P191F",5
"lib2","SARS-CoV-2","GAACAGAAGCTGTAAC",4,21.4,8.6,-2.24,0.34,1.5,1.24,0.05,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","GAACAGAATACATTAA",5,25.16,6.07,-4.77,0.56,1.65,1.11,0.01,">1 nonsynonymous","L5C G51D V77E G196W",4
"lib2","SARS-CoV-2","GAACAGACTATAAGAA",7,12343.56,9.77,-1.07,0.05,2.51,1.02,0,">1 nonsynonymous","K56M D90M I142V N151C",4
"lib2","SARS-CoV-2","GAACAGACTATCACAC",3,47.5,6,-4.84,1.95,1.5,1.19,0.01,">1 nonsynonymous","T55N G101S",2
"lib2","SARS-CoV-2","GAACAGAGCAAATGTT",7,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y I104F F134S",3
"lib2","SARS-CoV-2","GAACAGATAGTCTCAG",5,59.35,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y66R A81H Y93K",3
"lib2","SARS-CoV-2","GAACAGCCAAGGCCCA",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V G74T C102V F156L",4
"lib2","SARS-CoV-2","GAACAGCCAGATTGCA",7,104.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D68Q G116H",2
"lib2","SARS-CoV-2","GAACAGCCCCAAATAA",11,207.53,10.75,-0.08,0.03,2.9,1.12,0,"1 nonsynonymous","C195L",1
"lib2","SARS-CoV-2","GAACAGCTATACATGC",2,30.34,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N24Y F70S N130P R136P N157S",5
"lib2","SARS-CoV-2","GAACAGCTGCCCTCTT",1,13.03,10.85,0.02,0.18,3,1,0,">1 nonsynonymous","K128M E154R",2
"lib2","SARS-CoV-2","GAACAGGCAGAAATAG",3,31.84,9.1,-1.74,0.11,2.22,1.08,0.01,">1 nonsynonymous","F44T Q176M",2
"lib2","SARS-CoV-2","GAACAGGGCATAAGGT",17,194.91,9.73,-1.1,0.03,2.06,1.03,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","GAACAGGGCGTAAATT",1,7.38,6.5,-4.33,0.37,3,1.01,0,"1 nonsynonymous","L183N",1
"lib2","SARS-CoV-2","GAACAGGGTGATGAGC",9,68.8,10.05,-0.79,0.06,2.78,1.01,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","GAACAGGTAACTATTT",2,53.24,6,-4.84,1.03,3,1.22,0,">1 nonsynonymous","E10G Y35M D112T G166R",4
"lib2","SARS-CoV-2","GAACAGGTATAATAAT",5,41.12,6.61,-4.23,0.32,1.5,1.17,0.01,"1 nonsynonymous","D112G",1
"lib2","SARS-CoV-2","GAACAGTAAAGAGCGA",4,81.04,10.63,-0.21,0.06,2.88,1.11,0,">1 nonsynonymous","N30M Y39M",2
"lib2","SARS-CoV-2","GAACAGTAACTCAGCA",8,138.79,9.29,-1.54,0.12,1.52,1.14,0.01,">1 nonsynonymous","N40G T55P E76A T100C",4
"lib2","SARS-CoV-2","GAACAGTACGTAACTT",2,32.57,9.78,-1.06,0.13,2.31,1,0.01,">1 nonsynonymous","L5K C61T S129Y S139L",4
"lib2","SARS-CoV-2","GAACAGTCCCAATTTC",5,34.93,10.11,-0.72,0.09,2.79,1.07,0,">1 nonsynonymous","I2M F8M I138G",3
"lib2","SARS-CoV-2","GAACAGTCTTAAAAAC",6,153.38,8.41,-2.43,0.09,2.21,1.09,0,">1 nonsynonymous","Y35D T140H T170M",3
"lib2","SARS-CoV-2","GAACAGTGAAGTGATA",2,5.07,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S36V N64W C158V",3
"lib2","SARS-CoV-2","GAACAGTTAAAAATCA",6,56.26,10.91,0.07,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACAGTTATTATCAA",5,51.76,10.71,-0.13,0.03,2.91,1.09,0,"1 nonsynonymous","N120V",1
"lib2","SARS-CoV-2","GAACAGTTTAAATACT",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M Y50S",2
"lib2","SARS-CoV-2","GAACAGTTTAGAACGA",9,59.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61L L95R D137L",3
"lib2","SARS-CoV-2","GAACAGTTTTTTTGGT",8,48.65,9.37,-1.46,0.12,2.13,1.06,0,">1 nonsynonymous","C6S Y35N I142L",3
"lib2","SARS-CoV-2","GAACATAAAAAACCCT",2,26.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49V P82L V103I P177G",4
"lib2","SARS-CoV-2","GAACATAAAAATATAG",22,270.53,9.18,-1.66,0.1,1.66,1.08,0,">1 nonsynonymous","V37D R127Q",2
"lib2","SARS-CoV-2","GAACATAAACTTACGG",16,0.98,NA,NA,NA,NA,NA,NA,"stop","C49L G146I S200*",3
"lib2","SARS-CoV-2","GAACATAACAGAAATT",2,22.49,10.73,-0.1,0.07,2.96,1.03,0,"1 nonsynonymous","V115M",1
"lib2","SARS-CoV-2","GAACATAACATGTCGT",2,26.65,10.86,0.02,0.07,2.89,1.12,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","GAACATAACCAATTAA",1,13.84,10.81,-0.03,0.07,3,1.02,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","GAACATAACCTTATTA",10,80.9,6.57,-4.27,0.39,1.5,1.15,0.02,">1 nonsynonymous","L5R D90R N107A Y119T S129L",5
"lib2","SARS-CoV-2","GAACATAATAGACATA",1,50.34,9.17,-1.67,0.1,2.35,1.13,0,">1 nonsynonymous","S164I Y178M T201L",3
"lib2","SARS-CoV-2","GAACATACACCAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib2","SARS-CoV-2","GAACATACCGTAAGCT",17,180.2,9.53,-1.3,0.04,2.93,1.07,0,">1 nonsynonymous","Y119E S164H",2
"lib2","SARS-CoV-2","GAACATACCTGGCAAT",18,258.47,10.58,-0.26,0.03,2.92,1.05,0,">1 nonsynonymous","T85R D90R",2
"lib2","SARS-CoV-2","GAACATAGAAAACTTA",1,8.86,6,-4.84,2,3,1.07,0,">1 nonsynonymous","V11I G86C D97Y N107Q",4
"lib2","SARS-CoV-2","GAACATAGAACAACTG",6,100.39,10.77,-0.07,0.05,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACATATGGCCAATA",3,26.3,9.64,-1.2,0.14,1.95,1.15,0.01,"1 nonsynonymous","V11N",1
"lib2","SARS-CoV-2","GAACATATGTACCGAC",11,9.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P7R N13H N107L F185Y",4
"lib2","SARS-CoV-2","GAACATATTCACCCAC",1,29.9,9.34,-1.49,0.12,1.9,1.03,0.01,">1 nonsynonymous","V11S C61F",2
"lib2","SARS-CoV-2","GAACATCAAACGGGGC",2,0.34,NA,NA,NA,NA,NA,NA,"stop","L5V D34S S43T A81M A105C E135L Y159*",7
"lib2","SARS-CoV-2","GAACATCAAGGCCCCT",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N T55A",2
"lib2","SARS-CoV-2","GAACATCATTCATTGT",9,190.43,10.49,-0.34,0.05,2.94,1.05,0,">1 nonsynonymous","V37E F44L",2
"lib2","SARS-CoV-2","GAACATCATTTCGAGT",12,2.76,NA,NA,NA,NA,NA,NA,"stop","I72F Y93R F99N Y121* T201I",5
"lib2","SARS-CoV-2","GAACATCGATGTATAG",1,6.55,10.87,0.03,0.13,2.54,1.5,0,"1 nonsynonymous","Q163S",1
"lib2","SARS-CoV-2","GAACATCGCGCAGAGT",3,92.8,10.79,-0.05,0.05,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACATGAACTCAAAA",3,39.01,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C31V Y93D N120Y S129G T140R",5
"lib2","SARS-CoV-2","GAACATGATCCGCCAT",5,29.11,9.22,-1.61,0.07,2.13,1,0,">1 nonsynonymous","C6Y A81K",2
"lib2","SARS-CoV-2","GAACATGCAGGTTAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* V37M G83R",3
"lib2","SARS-CoV-2","GAACATGCCTGCAAAC",12,128.62,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L60S Y93T I138N",3
"lib2","SARS-CoV-2","GAACATGGTAACTCGC",8,37.72,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T46S Y93H E135L N151S",4
"lib2","SARS-CoV-2","GAACATGGTCATAAAG",6,4.78,NA,NA,NA,NA,NA,NA,"stop","F17P A81T T148P G152*",4
"lib2","SARS-CoV-2","GAACATGGTGGTGCAA",2,14.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K48P E141G",2
"lib2","SARS-CoV-2","GAACATGTAAATATGT",2,5.22,8.95,-1.89,0.27,2.33,1.5,0.02,">1 nonsynonymous","F44R T100S G174M",3
"lib2","SARS-CoV-2","GAACATGTCTGTCGTT",8,40.63,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5M V20L N64L V181S",4
"lib2","SARS-CoV-2","GAACATGTCTTAACTA",3,56.85,10.03,-0.81,0.09,2.52,1,0,">1 nonsynonymous","D97H F126L E141P",3
"lib2","SARS-CoV-2","GAACATTAATAATATC",2,1.12,NA,NA,NA,NA,NA,NA,"stop","P7* V77S",2
"lib2","SARS-CoV-2","GAACATTACAATTTAG",10,191.01,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K94G I138V G172P",3
"lib2","SARS-CoV-2","GAACATTATACACACT",1,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","GAACATTCAAAATAAC",2,82.61,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19T K87R A89S Q176L",4
"lib2","SARS-CoV-2","GAACATTCAACTATTG",10,124.93,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86S P177F T201L",3
"lib2","SARS-CoV-2","GAACATTCCAGGACGC",5,285.1,9.95,-0.88,0.05,2.42,1.04,0,">1 nonsynonymous","S41P F62A Y178T",3
"lib2","SARS-CoV-2","GAACATTCCTACATAT",6,80.44,9.24,-1.6,0.07,1.85,1.08,0,">1 nonsynonymous","G51W F62M T148K",3
"lib2","SARS-CoV-2","GAACATTCGGAGAGCT",11,76.56,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K87G Y91H D97C F167H L183F",5
"lib2","SARS-CoV-2","GAACATTCTTAGAGAT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","E10R R16Y G83S Y119G S139F Q168*",6
"lib2","SARS-CoV-2","GAACATTGAACAACGC",11,66.24,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","K94I V103M",2
"lib2","SARS-CoV-2","GAACATTTAATACGCT",13,101.14,8.99,-1.84,0.12,1.53,1.12,0.01,">1 nonsynonymous","S19L I138V",2
"lib2","SARS-CoV-2","GAACATTTAATGTTTA",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q G9M Y39S G86A Y119R",5
"lib2","SARS-CoV-2","GAACATTTAGGTTTAT",4,68.41,9.82,-1.02,0.07,2.14,1.05,0,">1 nonsynonymous","F62E D90T",2
"lib2","SARS-CoV-2","GAACATTTGCTAATTC",15,2.29,NA,NA,NA,NA,NA,NA,"stop","Q84F Y93R A105* Y165E",4
"lib2","SARS-CoV-2","GAACCAAAAAATACCA",2,22.64,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G116T Y143H C158H",3
"lib2","SARS-CoV-2","GAACCAAACAATACAT",2,38.46,10.86,0.02,0.06,2.99,1.05,0,"1 nonsynonymous","K198G",1
"lib2","SARS-CoV-2","GAACCAAATATTAACG",3,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G K48C F99V R136P Y143R",5
"lib2","SARS-CoV-2","GAACCAAATCTAGTGA",1,19.82,10.62,-0.21,0.06,2.84,1.13,0,">1 nonsynonymous","T15L Q168F",2
"lib2","SARS-CoV-2","GAACCAAATGAAACCT",12,134.05,10.73,-0.11,0.07,2.78,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCAACACTAAGTA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","S41* T46Q P96T N118A T140Y F156N V173F",7
"lib2","SARS-CoV-2","GAACCAACATTCACTT",2,25,7.87,-2.96,0.19,1.73,1.11,0.01,">1 nonsynonymous","N92S V115M G116A I138N",4
"lib2","SARS-CoV-2","GAACCAACTAGTTATA",3,28.06,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G83S L111P Q144L S164V Y175E",5
"lib2","SARS-CoV-2","GAACCAAGAATAAAGA",14,105.26,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D34W N40I E141D P149N R179G",5
"lib2","SARS-CoV-2","GAACCAAGTCAATACG",10,156.65,10.1,-0.73,0.06,2.7,1.03,0,">1 nonsynonymous","S19A K48S S147T",3
"lib2","SARS-CoV-2","GAACCAAGTTGTAAAT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H T55W A105D",3
"lib2","SARS-CoV-2","GAACCAATATGCAGGG",2,88.04,10.89,0.06,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCAATCTACGGAT",2,41.56,10.86,0.02,0.04,2.94,1.07,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","GAACCAATGACAGAGT",9,94.34,6,-4.84,2,3,1.19,0,">1 nonsynonymous","P96L R124V",2
"lib2","SARS-CoV-2","GAACCAATGGTTACGC",1,24.32,8.33,-2.51,0.13,2.33,1,0.01,">1 nonsynonymous","T3M Y119F P161S",3
"lib2","SARS-CoV-2","GAACCAATTGGTGAAT",6,103.92,10.84,0,0.04,2.95,1.07,0,">1 nonsynonymous","N64F V173L",2
"lib2","SARS-CoV-2","GAACCACAAACTATTT",3,16.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S29K C61S P82W P96G S200I",5
"lib2","SARS-CoV-2","GAACCACAACGACAAC",1,0.3,NA,NA,NA,NA,NA,NA,"stop","F47N R73* F99A I138T",4
"lib2","SARS-CoV-2","GAACCACACATCAAAA",3,13.98,10.06,-0.78,0.21,2.24,1.16,0.03,">1 nonsynonymous","C6G W106S D112L Y123K F156L",5
"lib2","SARS-CoV-2","GAACCACACTCCAGAT",6,57.18,10.5,-0.34,0.05,2.88,1.11,0,">1 nonsynonymous","K48R E135T",2
"lib2","SARS-CoV-2","GAACCACATAATAGGC",6,20.92,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","I72H V103Q",2
"lib2","SARS-CoV-2","GAACCACATCATTGAA",2,67.94,9.65,-1.19,0.07,2.22,1.02,0,">1 nonsynonymous","A18T F44S R78V",3
"lib2","SARS-CoV-2","GAACCACCACACTGAC",8,51.45,10.9,0.07,0.06,2.94,1.05,0,">1 nonsynonymous","V37F T55P Y66M P197V",4
"lib2","SARS-CoV-2","GAACCACCCCCAACCA",4,31.79,9.64,-1.19,0.11,2.03,1.08,0.01,">1 nonsynonymous","Y66V T85R S129M S139L",4
"lib2","SARS-CoV-2","GAACCACCTACTTAAC",3,79.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y39P D68A C102R N120K T140F",5
"lib2","SARS-CoV-2","GAACCACCTCTATTGT",1,0.42,NA,NA,NA,NA,NA,NA,"stop","V20K G51S C61* V71H",4
"lib2","SARS-CoV-2","GAACCACCTGTTAAAA",9,82.12,6.04,-4.8,0.74,1.5,1.16,0.01,">1 nonsynonymous","K94V N118S G166W",3
"lib2","SARS-CoV-2","GAACCACGGATTATGT",4,64.72,10.69,-0.14,0.04,2.95,1.06,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","GAACCACTAAAGGGAC",11,186.41,10.6,-0.24,0.03,3,1.01,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","GAACCACTATGAATAC",1,17.46,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I72Y Y121F C150R",3
"lib2","SARS-CoV-2","GAACCACTCCACCAGT",8,114.12,8.43,-2.4,0.09,2.7,1.06,0,">1 nonsynonymous","K114T Y143L T170K",3
"lib2","SARS-CoV-2","GAACCACTGATACCCG",2,17.32,7.5,-3.34,0.5,1.5,1.2,0.08,">1 nonsynonymous","G83Q P161M",2
"lib2","SARS-CoV-2","GAACCACTGTAACGAT",9,0.67,NA,NA,NA,NA,NA,NA,"stop","N4T S45C K87S V115L L122* F160E",6
"lib2","SARS-CoV-2","GAACCAGAAGCTGTCT",4,80.59,9.43,-1.41,0.09,2.17,1.04,0,">1 nonsynonymous","Y39C N58I N120F A190T",4
"lib2","SARS-CoV-2","GAACCAGAATCCCGAA",3,21.26,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C6R S29T D68H W106S T148S",5
"lib2","SARS-CoV-2","GAACCAGAGGCCACTT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D K87Y",2
"lib2","SARS-CoV-2","GAACCAGATTGTGGCA",3,45.54,10.82,-0.01,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCAGCAACACCAT",1,40.47,6.06,-4.78,1.53,1.5,1.26,0.04,">1 nonsynonymous","V37G A89K I104K Y175R",4
"lib2","SARS-CoV-2","GAACCAGGAACCTTAG",6,96.9,10.77,-0.06,0.03,2.93,1.05,0,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","GAACCAGGAGCGAAAT",10,239.66,10.01,-0.82,0.04,2.38,1.05,0,">1 nonsynonymous","R73K V173S",2
"lib2","SARS-CoV-2","GAACCAGGCGGAGCTT",2,45.65,10.81,-0.03,0.05,2.91,1.1,0,">1 nonsynonymous","V37F S43F F160N",3
"lib2","SARS-CoV-2","GAACCAGGGCCTTCGC",2,10.12,6,-4.84,2,1.5,1.11,0.07,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","GAACCAGTAAAAAGAA",1,32.12,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5T K87E V103L G146V",4
"lib2","SARS-CoV-2","GAACCAGTACCCCTTC",4,28.15,9.88,-0.95,0.07,2.55,1.04,0,">1 nonsynonymous","T15F L60T G83M D98N A190S",5
"lib2","SARS-CoV-2","GAACCAGTATTATGGG",3,0,NA,NA,NA,NA,NA,NA,"stop","S108* S129Q",2
"lib2","SARS-CoV-2","GAACCATCCAGAACAA",4,20.62,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C61P D75V P82F D98E K128V N151K",6
"lib2","SARS-CoV-2","GAACCATCTCATAAAC",5,12.01,7.66,-3.17,0.21,1.5,1.14,0.02,">1 nonsynonymous","L5V W106G G174K",3
"lib2","SARS-CoV-2","GAACCATTCCCCCCAA",4,57.33,9.39,-1.44,0.07,1.83,1.12,0,">1 nonsynonymous","Y39S C61F A105I",3
"lib2","SARS-CoV-2","GAACCCAAAACATTAT",1,5.84,6,-4.84,2,1.5,1.04,0.04,">1 nonsynonymous","P7L I104E",2
"lib2","SARS-CoV-2","GAACCCAAACTCACCT",8,55.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93P A145C",2
"lib2","SARS-CoV-2","GAACCCAACCACCCTA",3,23.5,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","T15A C49V T55W G166C C195G",5
"lib2","SARS-CoV-2","GAACCCAAGAGGCCCA",7,152.25,9.68,-1.16,0.03,2.94,1.05,0,">1 nonsynonymous","K114P H189N",2
"lib2","SARS-CoV-2","GAACCCAATAGCACTT",2,30.32,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T63Y I104H N120A Y143M",4
"lib2","SARS-CoV-2","GAACCCACACTATACT",1,7.67,NA,NA,NA,NA,NA,0.61,">1 nonsynonymous","F44T S69E N92V N107Y L162W",5
"lib2","SARS-CoV-2","GAACCCACCTTGCCAG",4,45.31,9.28,-1.56,0.22,1.77,1.09,0.03,">1 nonsynonymous","F8L F12L P96R F160R",4
"lib2","SARS-CoV-2","GAACCCACTATTTTAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M C49M N157P",3
"lib2","SARS-CoV-2","GAACCCATCAACTAAG",3,59.01,10.25,-0.59,0.06,2.82,1.01,0,"1 nonsynonymous","G83V",1
"lib2","SARS-CoV-2","GAACCCCATATAAAAA",6,57.63,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","A89M S113D N118G",3
"lib2","SARS-CoV-2","GAACCCCCAAATAGGC",1,11.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V37H C61S S139L G174I",4
"lib2","SARS-CoV-2","GAACCCCCAGCCGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T W106H T140E V173S",4
"lib2","SARS-CoV-2","GAACCCCCCCGCCGAA",4,80.97,10.6,-0.24,0.03,2.99,1.02,0,">1 nonsynonymous","N24R G174M",2
"lib2","SARS-CoV-2","GAACCCCTAAGATCTT",1,12.65,9.22,-1.61,0.29,1.59,1.07,0.05,">1 nonsynonymous","T15H K132V G155I",3
"lib2","SARS-CoV-2","GAACCCCTCTTGGAAT",11,49.77,6,-4.84,2,3,1.33,0.02,">1 nonsynonymous","C6G K56F K94C G174Y",4
"lib2","SARS-CoV-2","GAACCCCTTGTATAAC",2,69.36,10.71,-0.13,0.04,3,1.01,0,"1 nonsynonymous","L57I",1
"lib2","SARS-CoV-2","GAACCCGAGAGCGCTA",1,45.42,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D34S C61S G83N Y93A",4
"lib2","SARS-CoV-2","GAACCCGCACTCGTCC",1,45.74,8.52,-2.31,0.06,2.69,1.04,0,">1 nonsynonymous","F99W Y143C",2
"lib2","SARS-CoV-2","GAACCCGGGGCGTTAT",1,22.08,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S69F R78C K87L S139D G172S",5
"lib2","SARS-CoV-2","GAACCCGTAGATCACT",5,53.87,10.26,-0.58,0.04,3,1.03,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","GAACCCGTTCTCCAAC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib2","SARS-CoV-2","GAACCCTCACCAGTAG",3,9.54,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","K56P D90F F99L P197K",4
"lib2","SARS-CoV-2","GAACCCTCACTTGTGG",5,83.55,6,-4.84,1.3,3,1.22,0,">1 nonsynonymous","K56Y G152S C158L",3
"lib2","SARS-CoV-2","GAACCCTCATAAAACA",1,78.15,10.23,-0.61,0.07,2.79,1,0,">1 nonsynonymous","A14E Y39C",2
"lib2","SARS-CoV-2","GAACCCTCCTGTTTAC",2,44.55,8.22,-2.62,0.15,2.69,1.11,0.01,">1 nonsynonymous","R27S Y175S",2
"lib2","SARS-CoV-2","GAACCCTTAGTCCTTA",3,48.33,10.8,-0.04,0.08,2.86,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GAACCCTTCTACACAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N30* P54H A89R T100V",4
"lib2","SARS-CoV-2","GAACCCTTGTGATGTA",4,83.92,10.07,-0.77,0.12,2.36,1,0.01,"1 nonsynonymous","L95C",1
"lib2","SARS-CoV-2","GAACCCTTTTATGGAA",8,44.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I28H A42N L57N V103D C150T",5
"lib2","SARS-CoV-2","GAACCGAAAATGTGTG",4,14.14,8.73,-2.1,0.19,1.5,1.03,0.02,">1 nonsynonymous","V103L E141H",2
"lib2","SARS-CoV-2","GAACCGAAATATTAAA",6,10.67,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","C102N G146N",2
"lib2","SARS-CoV-2","GAACCGAACATGCGGT",7,33.11,10.88,0.04,0.06,2.95,1.06,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","GAACCGAATTTAGGAT",2,41.6,9.52,-1.31,0.11,1.7,1.12,0,">1 nonsynonymous","A67Y T140P",2
"lib2","SARS-CoV-2","GAACCGAGGGGCAAGC",6,71.63,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","K26H G51C D90P E141N E154T N171Y",6
"lib2","SARS-CoV-2","GAACCGATAAACTTTA",6,40.02,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","A22V F47M T55E V77K T100L G117P K132Q",7
"lib2","SARS-CoV-2","GAACCGATGTGATAAA",6,59.01,10.74,-0.09,0.04,2.93,1.09,0,">1 nonsynonymous","C61I K199T",2
"lib2","SARS-CoV-2","GAACCGATTGACAATA",1,4.32,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAACCGATTGTCAAAC",2,8.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33I W106M Q176V",3
"lib2","SARS-CoV-2","GAACCGCAAGGCGGAC",3,35.43,6.03,-4.8,0.73,1.5,1.09,0.01,">1 nonsynonymous","T3R G83L L95V L162N V180I",5
"lib2","SARS-CoV-2","GAACCGCAGCAAGTCG",1,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72T N107Q R127F G174R",4
"lib2","SARS-CoV-2","GAACCGCCCAGGAGTA",9,83.8,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R78H K94H G101S N151S",4
"lib2","SARS-CoV-2","GAACCGCCCCGCAGAT",2,32.06,9.44,-1.4,0.11,1.99,1.06,0,">1 nonsynonymous","D34Y Y39V Y91L N171H",4
"lib2","SARS-CoV-2","GAACCGCCCCGGTGAA",9,2.79,NA,NA,NA,NA,NA,NA,"stop","E10S T46L C61D N92L P169*",5
"lib2","SARS-CoV-2","GAACCGCGGGCTTTAG",7,93.55,11.25,0.41,0.07,2.83,1.03,0,"1 nonsynonymous","N171Y",1
"lib2","SARS-CoV-2","GAACCGCTACTCACAT",7,51.57,10.86,0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCGCTCCAACCGG",5,36.04,6.06,-4.77,1.07,1.5,1.2,0.02,">1 nonsynonymous","F8K K128V N151V",3
"lib2","SARS-CoV-2","GAACCGCTGGCCGTAA",1,6.63,10.72,-0.12,0.11,2.77,1.29,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCGCTTACACTAT",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46G L95F V115W K132C C150T",5
"lib2","SARS-CoV-2","GAACCGGACCAAAATG",8,82.17,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F17A A42F D98R Q176L T201H",5
"lib2","SARS-CoV-2","GAACCGGATTAGCAAG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","S45H C61* R73V",3
"lib2","SARS-CoV-2","GAACCGGCGATCATGC",2,7.57,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Q84W L131Q E154V",3
"lib2","SARS-CoV-2","GAACCGGCTTTTCATT",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S D98S R127W",3
"lib2","SARS-CoV-2","GAACCGGTAATTAAAG",7,102.36,7.56,-3.28,0.12,1.5,1.06,0,">1 nonsynonymous","P7V R78F G166L T201I",4
"lib2","SARS-CoV-2","GAACCGGTAGACCAGT",1,41.55,9.36,-1.47,0.13,1.88,1.13,0.01,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","GAACCGGTCTGTCCAA",10,60.64,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K48W L60I D68F Y119C F156L V180S",6
"lib2","SARS-CoV-2","GAACCGGTTGGAAACC",7,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M L57R P96K T100M T201Y",5
"lib2","SARS-CoV-2","GAACCGTACACAAGCC",2,15.36,10.99,0.16,0.03,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCGTAGACGCCTT",4,36.65,9.21,-1.62,0.14,2.35,1.05,0.01,">1 nonsynonymous","A67F I142Q",2
"lib2","SARS-CoV-2","GAACCGTCATCTGGGG",2,46.26,8.56,-2.28,0.28,1.5,1,0.03,">1 nonsynonymous","L38H D98M",2
"lib2","SARS-CoV-2","GAACCGTGAGACCCAA",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L V103M Y143S",3
"lib2","SARS-CoV-2","GAACCTAAAACAAATG",4,84.85,8.19,-2.65,0.15,2.27,1.08,0.01,">1 nonsynonymous","A105S Y143N",2
"lib2","SARS-CoV-2","GAACCTAAAACATTGA",3,119.26,10.81,-0.02,0.04,2.94,1.08,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","GAACCTAAACTGGGAG",5,102.89,9.31,-1.53,0.11,1.7,1.03,0.01,">1 nonsynonymous","A33E Y123I",2
"lib2","SARS-CoV-2","GAACCTAACAAAATCC",4,5.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R27S D137F",2
"lib2","SARS-CoV-2","GAACCTAATGCTGAGT",5,35.76,6.22,-4.62,0.33,1.98,1.14,0.01,">1 nonsynonymous","C61G Y66L D97L R136E",4
"lib2","SARS-CoV-2","GAACCTACATCCCGTG",1,6.67,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","I28E D59K F99E N107Y K114C N120T",6
"lib2","SARS-CoV-2","GAACCTACCGAACAGT",9,0.99,NA,NA,NA,NA,NA,NA,"stop","N4S D34S I88N P96* N118S V180*",6
"lib2","SARS-CoV-2","GAACCTACCTTTAACA",8,200.15,10.44,-0.4,0.04,2.94,1.06,0,">1 nonsynonymous","G83F T140V C195N",3
"lib2","SARS-CoV-2","GAACCTAGCTAGAATG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","T15C Y21V A67F V77*",4
"lib2","SARS-CoV-2","GAACCTAGTTGACCGA",10,92.01,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12L G86K Y143M K198G",4
"lib2","SARS-CoV-2","GAACCTATCTTACATA",1,10.03,10.1,-0.73,0.1,2.89,1.03,0.01,">1 nonsynonymous","A42V T170M",2
"lib2","SARS-CoV-2","GAACCTATGACAAGCT",2,42.64,10.81,-0.03,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACCTATGAGAACCA",4,53.52,10.2,-0.63,0.04,2.87,1.01,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","GAACCTATTAGCCAAT",14,232.92,10.63,-0.2,0.03,2.96,1.03,0,">1 nonsynonymous","T63C N120G",2
"lib2","SARS-CoV-2","GAACCTCCTATACTCC",12,137.5,6.43,-4.4,0.48,1.5,1.21,0.02,">1 nonsynonymous","P54N Y119V F134N E154F",4
"lib2","SARS-CoV-2","GAACCTCTCACTAATC",15,376.67,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","V65L K128T P161L",3
"lib2","SARS-CoV-2","GAACCTGATATTATGG",1,18.99,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C6R Y50L S69M",3
"lib2","SARS-CoV-2","GAACCTGGAACTTCTG",18,108.62,6.21,-4.62,0.4,1.5,1.14,0.01,">1 nonsynonymous","S45R F62L T85C P96D",4
"lib2","SARS-CoV-2","GAACCTGGAATCTGTC",4,64.74,8.5,-2.33,0.13,1.87,1.04,0.01,">1 nonsynonymous","I2C V37E D112Y",3
"lib2","SARS-CoV-2","GAACCTGGAGACTTGC",12,190.53,10.77,-0.06,0.04,2.89,1.11,0,"1 nonsynonymous","V153I",1
"lib2","SARS-CoV-2","GAACCTGTGTCTTGGT",2,20.5,10.65,-0.18,0.08,2.83,1.19,0,">1 nonsynonymous","C61P K198M",2
"lib2","SARS-CoV-2","GAACCTGTTAGATGAA",13,552.49,9.85,-0.99,0.03,2.92,1.03,0,"1 nonsynonymous","N118C",1
"lib2","SARS-CoV-2","GAACCTGTTCTTCTCC",4,19.47,10.68,-0.16,0.09,2.96,1.01,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","GAACCTTAAACATAAA",5,65.76,10.56,-0.28,0.03,2.96,1.04,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","GAACCTTAAGTCTAAA",3,16.63,9.03,-1.81,0.24,1.51,1.09,0.04,">1 nonsynonymous","G86C K114R",2
"lib2","SARS-CoV-2","GAACCTTGAGCGCAGC",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R N64V G101N",3
"lib2","SARS-CoV-2","GAACCTTGCGCTCAGT",11,342.66,8.76,-2.07,0.05,2.96,1.09,0,">1 nonsynonymous","V37T S43P T170V",3
"lib2","SARS-CoV-2","GAACCTTTATGAGTTG",6,78.07,9.81,-1.02,0.07,2.13,1.06,0,">1 nonsynonymous","E76K S129H",2
"lib2","SARS-CoV-2","GAACCTTTGCATGCCA",6,45.1,10.95,0.12,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","GAACCTTTTAGGTCAA",18,352.71,10.69,-0.14,0.03,2.89,1.11,0,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","GAACGAAAAACTGTAA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78F R136L",2
"lib2","SARS-CoV-2","GAACGAAATCACCTTC",13,409.15,10.25,-0.58,0.03,2.86,1.03,0,">1 nonsynonymous","N4S A14C",2
"lib2","SARS-CoV-2","GAACGAACAAAAGGAC",9,1.15,NA,NA,NA,NA,NA,NA,"stop","V37* K87V S139C V181A",4
"lib2","SARS-CoV-2","GAACGAACAACATTAA",2,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P K87S P96L C102R",4
"lib2","SARS-CoV-2","GAACGAACATCCCAAA",4,71.08,10.79,-0.05,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGAACCAATGGCA",2,84.2,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N120K F167T",2
"lib2","SARS-CoV-2","GAACGAACCCCCCGCG",10,160.31,10.68,-0.16,0.04,2.9,1.08,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","GAACGAACTATAAAAG",17,353.88,7.16,-3.68,0.2,1.5,1.09,0.01,">1 nonsynonymous","Y39R S45Y N110G Q176K T201G",5
"lib2","SARS-CoV-2","GAACGAAGAGGCTATT",4,22.88,10.69,-0.14,0.1,2.76,1.27,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","GAACGAAGGAATCCAC",14,190.26,10.16,-0.67,0.03,2.7,1.05,0,">1 nonsynonymous","N40I K199T",2
"lib2","SARS-CoV-2","GAACGAATTGATCCAA",18,321.25,10.18,-0.66,0.04,2.69,1.05,0,">1 nonsynonymous","S69R S129N",2
"lib2","SARS-CoV-2","GAACGACAACTCCCCA",1,41.54,10.51,-0.33,0.06,2.96,1,0,">1 nonsynonymous","V52S K56L Q84A S129N",4
"lib2","SARS-CoV-2","GAACGACACAAGTAGT",10,181.22,6.04,-4.8,0.66,1.5,1.17,0.01,">1 nonsynonymous","G117D N151D G155Y",3
"lib2","SARS-CoV-2","GAACGACGATGATATT",4,0.86,NA,NA,NA,NA,NA,NA,"stop","D34H T55N Y121S Q144L F167*",5
"lib2","SARS-CoV-2","GAACGACTACGGGAAT",7,131,10.58,-0.25,0.04,2.88,1.08,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","GAACGACTCGTTGTTT",2,7.43,6.77,-4.06,0.47,1.5,1.09,0.02,">1 nonsynonymous","S41L Q84L Q176P",3
"lib2","SARS-CoV-2","GAACGACTGTCAATGC",9,94.9,10.86,0.02,0.04,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGACTTAGCAATA",1,34.79,10.99,0.15,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGAGACGACATTC",4,45.88,10.88,0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGAGAGAGTCTAA",5,0.35,NA,NA,NA,NA,NA,NA,"stop","F8I T85W R127* N157P",4
"lib2","SARS-CoV-2","GAACGAGCCTGAATTT",3,22.55,10.86,0.03,0.07,3,1.01,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","GAACGAGCGACCACAG",3,59.54,10.69,-0.15,0.06,2.94,1.05,0,">1 nonsynonymous","S41G D59S",2
"lib2","SARS-CoV-2","GAACGAGCTAACTATC",1,22.78,6.82,-4.02,0.29,1.79,1.24,0.01,"1 nonsynonymous","C150G",1
"lib2","SARS-CoV-2","GAACGAGCTATGGAGA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","N30* Q79H",2
"lib2","SARS-CoV-2","GAACGAGGCTGTAGCC",19,63.85,6.18,-4.66,0.79,1.5,1.25,0.02,">1 nonsynonymous","N13L G86F Y93A",3
"lib2","SARS-CoV-2","GAACGAGGGATTGTTA",3,39.06,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C61S T85N F99V W106I Y123M",5
"lib2","SARS-CoV-2","GAACGATAAGTACTTT",8,115.02,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","F12M R16S N64T Y178D T201W",5
"lib2","SARS-CoV-2","GAACGATACAGTATCG",7,1.99,NA,NA,NA,NA,NA,NA,"stop","A89Y F134*",2
"lib2","SARS-CoV-2","GAACGATAGCTGCTTT",19,147.6,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","I2E D68W I88L Q144L",4
"lib2","SARS-CoV-2","GAACGATAGTAGAAAA",3,1.46,NA,NA,NA,NA,NA,NA,"stop","N118P I142L N151*",3
"lib2","SARS-CoV-2","GAACGATATACTAGAG",2,13.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L60K N118A G146F",3
"lib2","SARS-CoV-2","GAACGATCATCAAAAC",3,17.4,10.7,-0.13,0.06,3,1.01,0,">1 nonsynonymous","S129K F134N",2
"lib2","SARS-CoV-2","GAACGATGCCATTTCA",2,16.18,8.71,-2.12,0.13,2.98,1.08,0.01,">1 nonsynonymous","G9V Y119T I142P G166V",4
"lib2","SARS-CoV-2","GAACGCAACGCTCTGT",8,0.43,NA,NA,NA,NA,NA,NA,"stop","L5* C61* R78I",3
"lib2","SARS-CoV-2","GAACGCACTAAAGCGA",2,14.81,6.31,-4.53,2,1.5,1.09,0.03,">1 nonsynonymous","N4S D112F R127S",3
"lib2","SARS-CoV-2","GAACGCAGAAAGTTTA",3,0.86,NA,NA,NA,NA,NA,NA,"stop","L38Y D68Q N151*",3
"lib2","SARS-CoV-2","GAACGCAGCAGTATTG",1,37.58,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S45L Y93R",2
"lib2","SARS-CoV-2","GAACGCCATGATCTCA",4,0,NA,NA,NA,NA,NA,NA,"stop","P7L N13H T46N G155* P177F",5
"lib2","SARS-CoV-2","GAACGCCGCAATAATA",1,6.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9A A42D G101R F156I Y178P",5
"lib2","SARS-CoV-2","GAACGCCTGCATTAAG",4,74.13,10.82,-0.02,0.03,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GAACGCGACCATAAAA",1,47.04,10.74,-0.09,0.07,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGCGACCTACTTG",2,3.46,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAACGCGCCTTGATCG",1,12.98,10.81,-0.03,0.12,2.8,1.15,0.01,">1 nonsynonymous","A22E S43R N120G",3
"lib2","SARS-CoV-2","GAACGCGTGAATGCAT",11,114,9.44,-1.39,0.08,1.78,1.06,0,">1 nonsynonymous","G51F I80V",2
"lib2","SARS-CoV-2","GAACGCTAAGTCCGCT",8,1282.48,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A89M V103K N110Y L122R",4
"lib2","SARS-CoV-2","GAACGCTAATATATTG",3,37.05,10.13,-0.71,0.05,2.98,1.02,0,">1 nonsynonymous","A22K E154I",2
"lib2","SARS-CoV-2","GAACGCTAATTTAACG",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","GAACGCTATGTCAACT",3,15.62,7.77,-3.07,0.34,1.5,1.09,0.07,">1 nonsynonymous","L60K D98C Q144Y P149H",4
"lib2","SARS-CoV-2","GAACGCTATTCCGTGA",10,0.95,NA,NA,NA,NA,NA,NA,"stop","E76* N92T",2
"lib2","SARS-CoV-2","GAACGCTCCAAAGCCT",1,35.13,6,-4.84,2,3,1.1,0,">1 nonsynonymous","D97A I104F G117A S139D Q163H R179V",6
"lib2","SARS-CoV-2","GAACGCTCTTAGTTGA",1,42.98,8.74,-2.1,0.1,2.94,1.13,0,">1 nonsynonymous","L125N K132I P169M",3
"lib2","SARS-CoV-2","GAACGCTGGGCTAAAA",1,0.11,NA,NA,NA,NA,NA,NA,"stop","F12* C61K V103*",3
"lib2","SARS-CoV-2","GAACGCTTCAAAATCA",2,5.76,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","G86R K94N D112T G146K P161N",5
"lib2","SARS-CoV-2","GAACGGAATCCGACAT",4,0.36,NA,NA,NA,NA,NA,NA,"stop","F44D E154*",2
"lib2","SARS-CoV-2","GAACGGACAGGGTTAT",13,6.59,NA,NA,NA,NA,NA,NA,"stop","C61T S139* F160Q",3
"lib2","SARS-CoV-2","GAACGGACATACACAT",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L G86I P96D",3
"lib2","SARS-CoV-2","GAACGGATGACATCCA",9,141.79,6.11,-4.73,0.67,1.5,1.18,0.01,">1 nonsynonymous","E10C D90H D97N Y178V",4
"lib2","SARS-CoV-2","GAACGGCAATGTCCAC",10,324.54,10.19,-0.64,0.03,2.87,1.06,0,"1 nonsynonymous","Q176M",1
"lib2","SARS-CoV-2","GAACGGCACACGGGCC",4,27.49,6.22,-4.61,0.46,1.5,1.08,0.01,">1 nonsynonymous","G51Y N64K P96N K198N",4
"lib2","SARS-CoV-2","GAACGGCAGATGTTCC",3,89.11,10.59,-0.25,0.04,2.93,1.06,0,">1 nonsynonymous","L5V V65G",2
"lib2","SARS-CoV-2","GAACGGCATACTAATA",7,88.3,9.58,-1.25,0.09,2.3,1.1,0,">1 nonsynonymous","Q84R N107K I138V",3
"lib2","SARS-CoV-2","GAACGGCGGAGATGAT",5,186.89,9.48,-1.36,0.07,2.1,1.1,0,">1 nonsynonymous","C6L D59R N120M",3
"lib2","SARS-CoV-2","GAACGGCGGCAGTCGA",1,12.08,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S36K L60Y T100S I104R Y175W",5
"lib2","SARS-CoV-2","GAACGGGAACTCAATT",3,59.45,10.34,-0.5,0.05,2.86,1.08,0,">1 nonsynonymous","D98I Q144N",2
"lib2","SARS-CoV-2","GAACGGGCCAGGCAAG",15,206.94,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y39C R127T G174Y",3
"lib2","SARS-CoV-2","GAACGGGTCAACGAAT",17,123.54,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N4Q R27A C49W K56L I80G N130P F156G T201S",8
"lib2","SARS-CoV-2","GAACGGTCCATTAAAA",5,90.54,10.8,-0.04,0.05,2.92,1.1,0,">1 nonsynonymous","Y35I A42G T55H",3
"lib2","SARS-CoV-2","GAACGGTTAGTGAGAA",1,185.24,10.72,-0.12,0.04,2.95,1.05,0,"1 nonsynonymous","G152R",1
"lib2","SARS-CoV-2","GAACGTAAAACGCGGA",5,8.27,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","V37S K87L S129V",3
"lib2","SARS-CoV-2","GAACGTAAAGGTCGCA",6,49,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y35C A42V P149M F160L G174V",5
"lib2","SARS-CoV-2","GAACGTAACATCCCAA",3,74.27,10.17,-0.67,0.06,2.85,1.05,0,">1 nonsynonymous","S29L T100F L122W",3
"lib2","SARS-CoV-2","GAACGTAATATCCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59K Q84L K132A G152L",4
"lib2","SARS-CoV-2","GAACGTAATCCAACTG",8,47.68,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C6R P82A K114L P161N",4
"lib2","SARS-CoV-2","GAACGTACAACCAGGG",1,9.73,10.93,0.09,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACGTAGGCTTATCA",2,83.63,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V103C L162V G174A",3
"lib2","SARS-CoV-2","GAACGTAGGGCAATAT",9,122.16,8.26,-2.58,0.13,2.01,1.06,0.01,">1 nonsynonymous","Y119L E141W N151Y",3
"lib2","SARS-CoV-2","GAACGTAGTATTCAGC",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L Y143V P149L E154D",4
"lib2","SARS-CoV-2","GAACGTATACCCATCA",3,0.58,NA,NA,NA,NA,NA,NA,"stop","E10N L38W A81T G86D L95A Y123I K132*",7
"lib2","SARS-CoV-2","GAACGTATTCAGCGTA",3,17.01,NA,NA,NA,NA,NA,NA,"stop","S53M D98* I142M P177F",4
"lib2","SARS-CoV-2","GAACGTCAGATATCAT",2,38.55,10.61,-0.22,0.03,3,1,0,">1 nonsynonymous","F62S S200W",2
"lib2","SARS-CoV-2","GAACGTCTCCTGCCTT",1,27.14,9.3,-1.53,0.11,1.73,1.11,0.01,">1 nonsynonymous","S69L H189F",2
"lib2","SARS-CoV-2","GAACGTGACTTTTAGA",1,7.76,8.97,-1.86,0.09,3,1.02,0,">1 nonsynonymous","N110T G166L",2
"lib2","SARS-CoV-2","GAACGTGCCACTGCGA",5,32.61,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10M F99G L162S N171E",4
"lib2","SARS-CoV-2","GAACGTGGCCTTCCAG",4,46.24,6,-4.84,1.38,3,1.28,0.01,">1 nonsynonymous","N107F E135R E141F S147M C195L S200T",6
"lib2","SARS-CoV-2","GAACGTGGGGCAGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S29I F167A",3
"lib2","SARS-CoV-2","GAACGTGTTAAACCCC",3,169.01,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G86T P161H P177D",3
"lib2","SARS-CoV-2","GAACGTTATGCACATC",19,226.99,9.68,-1.16,0.05,1.95,1.05,0,"1 nonsynonymous","A67G",1
"lib2","SARS-CoV-2","GAACGTTCTATAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43A K56M F99* P149R",4
"lib2","SARS-CoV-2","GAACGTTTTCTAACCC",2,19.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14T F17L I88R G146T P169L",5
"lib2","SARS-CoV-2","GAACTAAAATAAAGTA",1,2.13,NA,NA,NA,NA,NA,NA,"stop","C6L A42M R136*",3
"lib2","SARS-CoV-2","GAACTAAACGTTGATT",3,11.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13R G86T L125S",3
"lib2","SARS-CoV-2","GAACTAAAGAAGAACA",1,30.82,9.4,-1.43,0.05,2.84,1.06,0,"1 nonsynonymous","I142R",1
"lib2","SARS-CoV-2","GAACTAAAGCAAAAGC",1,41.51,10.98,0.15,0.06,2.98,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACTAAAGGCTGACA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","R27* Y35K T63K R136W Y143P",5
"lib2","SARS-CoV-2","GAACTAACACAAATAT",7,88.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N118I F167V",2
"lib2","SARS-CoV-2","GAACTAACAGTCTAAG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F17S V65E R73V P82W G152V S200*",6
"lib2","SARS-CoV-2","GAACTAACATCACAAC",2,0.63,NA,NA,NA,NA,NA,NA,"stop","V37* C61V Y91S S113R",4
"lib2","SARS-CoV-2","GAACTAACCTATGAGA",1,15.33,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","N92Y G116K",2
"lib2","SARS-CoV-2","GAACTAATAAACGTAG",3,42.71,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16L A81D C102Y V103T S147L",5
"lib2","SARS-CoV-2","GAACTAATCCCTCAAG",10,207.64,9.75,-1.09,0.03,2.94,1.06,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","GAACTAATTTGCGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","R16Q G101* A145V P197Q",4
"lib2","SARS-CoV-2","GAACTAATTTTAACGA",7,133.78,10.86,0.02,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACTACAACGGGCCT",8,69.19,9.07,-1.76,0.21,1.62,1.1,0.03,">1 nonsynonymous","A42E V71S",2
"lib2","SARS-CoV-2","GAACTACAAGTTGCAT",13,151.25,10.59,-0.24,0.07,2.84,1.09,0,">1 nonsynonymous","G152Y T201S",2
"lib2","SARS-CoV-2","GAACTACAATCAAAAA",1,46.64,10.06,-0.77,0.05,2.76,1.08,0,">1 nonsynonymous","D90Y K114V S129R",3
"lib2","SARS-CoV-2","GAACTACAATCGGGCA",4,39.75,7.89,-2.94,0.2,1.79,1.1,0.02,">1 nonsynonymous","L38F S113V G155K",3
"lib2","SARS-CoV-2","GAACTACACATTTATA",6,121.92,10.06,-0.77,0.06,2.74,1.03,0,">1 nonsynonymous","L131C T201G",2
"lib2","SARS-CoV-2","GAACTACATATATTCC",1,8.7,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14T S69T P133N N151M T170I",5
"lib2","SARS-CoV-2","GAACTACCGTTAGAGA",8,0.45,NA,NA,NA,NA,NA,NA,"stop","N58K D98* S139H",3
"lib2","SARS-CoV-2","GAACTACCTTATCTAT",2,39.8,9.09,-1.74,0.13,2.28,1.01,0.01,">1 nonsynonymous","D112V T148N",2
"lib2","SARS-CoV-2","GAACTACGAGGGAGAG",5,24.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49S L57M R136T",3
"lib2","SARS-CoV-2","GAACTACGATGGTACA",3,86.55,9.23,-1.6,0.12,1.82,1.11,0.01,">1 nonsynonymous","C6S P96S N120S",3
"lib2","SARS-CoV-2","GAACTACGCTCACCTA",12,19.18,6.21,-4.62,0.65,1.5,1.08,0.02,">1 nonsynonymous","F8L A22D L95R",3
"lib2","SARS-CoV-2","GAACTACGTCATCCTG",12,258.95,10.84,0,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACTACGTTTCTCAA",7,51.94,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","R16S Y165K V182A",3
"lib2","SARS-CoV-2","GAACTACTGTACAAAG",3,2.12,NA,NA,NA,NA,NA,NA,"stop","K26* N40M D59S K114M",4
"lib2","SARS-CoV-2","GAACTAGAAAATCAAT",4,49.62,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5N S29G A105K T201G",4
"lib2","SARS-CoV-2","GAACTAGAACATAGAA",10,35.19,6,-4.84,1.34,1.5,1.06,0.01,">1 nonsynonymous","D137T E154T V181W",3
"lib2","SARS-CoV-2","GAACTAGCACATCCCG",3,30.87,9.75,-1.09,0.13,1.82,1.03,0.01,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","GAACTAGCGCAACTCC",2,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Y W106E",2
"lib2","SARS-CoV-2","GAACTAGGAGATAGCA",1,30.32,10.41,-0.43,0.06,3,1.01,0,">1 nonsynonymous","T140I G155T P197T",3
"lib2","SARS-CoV-2","GAACTAGGATAACAAT",4,35.33,6.26,-4.58,0.63,1.5,1.15,0.02,">1 nonsynonymous","L5D N24G P54S N58S I138K Y143L",6
"lib2","SARS-CoV-2","GAACTAGGGACATGGG",4,49.72,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2V L38F Q79W G155V",4
"lib2","SARS-CoV-2","GAACTAGTAAGCAGCG",1,22.33,10.67,-0.17,0.07,2.94,1.06,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","GAACTAGTAGATACAG",15,103.14,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C49K S53G Y66T K87S",4
"lib2","SARS-CoV-2","GAACTAGTTCAAGAAG",19,118.7,10.11,-0.73,0.07,2.37,1.02,0,">1 nonsynonymous","S41D P96M",2
"lib2","SARS-CoV-2","GAACTATAACATGTTT",14,1.46,NA,NA,NA,NA,NA,NA,"stop","T15K R27* D90R D97L",4
"lib2","SARS-CoV-2","GAACTATAATCAACAG",4,68.23,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F8V S29T G83R K128W I142S",5
"lib2","SARS-CoV-2","GAACTATACAGTGTAG",7,84.04,10.16,-0.68,0.04,2.77,1.03,0,">1 nonsynonymous","Y50M K56R L122K",3
"lib2","SARS-CoV-2","GAACTATACCGCCAAT",16,108.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G74P G86S E141R Q168A P169T",5
"lib2","SARS-CoV-2","GAACTATACTGTATTC",3,67.27,10.8,-0.03,0.04,2.92,1.09,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","GAACTATATAATGGAC",3,42.16,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","R16G A89E F156E",3
"lib2","SARS-CoV-2","GAACTATATACGTATG",11,62.28,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y39L V71G T85Q I104G",4
"lib2","SARS-CoV-2","GAACTATCAAATTTCC",2,23.3,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A42G K48Q N64G F167G V173E Y178H S200H",7
"lib2","SARS-CoV-2","GAACTATCAGTAACGT",3,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99D N107C S200P",3
"lib2","SARS-CoV-2","GAACTATCCAAGCCTT",7,66.42,6.01,-4.83,1.07,1.5,1.25,0.03,">1 nonsynonymous","R27Q Q79A Y165L",3
"lib2","SARS-CoV-2","GAACTATCCAAGGGAA",2,17.59,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A89W G152I",2
"lib2","SARS-CoV-2","GAACTATGACTAAGCA",5,89.48,10.83,-0.01,0.06,2.9,1.12,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","GAACTATGAGGATATG",1,11.57,6,-4.84,1.02,3,1.04,0,">1 nonsynonymous","T3L R25T N30V Y39F D90G P149L",6
"lib2","SARS-CoV-2","GAACTATGGTACCCGA",5,2.44,NA,NA,NA,NA,NA,NA,"stop","Y66N D75*",2
"lib2","SARS-CoV-2","GAACTATTAAGCATGA",8,134.65,10.16,-0.68,0.04,2.48,1.07,0,">1 nonsynonymous","G51Y L122G",2
"lib2","SARS-CoV-2","GAACTATTAATTACGT",3,0,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib2","SARS-CoV-2","GAACTATTAGTCTAAA",6,14.8,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","S41R F99P",2
"lib2","SARS-CoV-2","GAACTATTCTGGACAT",6,66.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35E S69R Y91P G117S L131P",5
"lib2","SARS-CoV-2","GAACTATTGGGAATGA",14,96.55,6,-4.84,1.74,3,1.19,0,">1 nonsynonymous","T3R D68W Y123R",3
"lib2","SARS-CoV-2","GAACTATTTCTAAATT",6,87.42,9.85,-0.99,0.14,2.3,1.05,0.01,">1 nonsynonymous","S69M P149S E154N",3
"lib2","SARS-CoV-2","GAACTATTTTTAGCAA",8,260.17,10.74,-0.09,0.04,2.92,1.08,0,">1 nonsynonymous","T3S D59A",2
"lib2","SARS-CoV-2","GAACTCAAAAAATTCC",3,40.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56V F62V K94F W106I",4
"lib2","SARS-CoV-2","GAACTCAAACGCGCCT",1,9.78,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D90R V153P S164D S200A",4
"lib2","SARS-CoV-2","GAACTCAAAGCAGCAT",5,41.84,10.79,-0.04,0.04,2.94,1.07,0,"1 nonsynonymous","I138N",1
"lib2","SARS-CoV-2","GAACTCAAATCATGGT",12,186.4,10.76,-0.08,0.03,2.93,1.08,0,">1 nonsynonymous","F8Y S200I",2
"lib2","SARS-CoV-2","GAACTCAACGCTAAGA",1,15.74,8.7,-2.13,0.17,2.86,1.13,0.01,">1 nonsynonymous","K56L E141A G166M",3
"lib2","SARS-CoV-2","GAACTCAAGGAGAGAA",3,58.63,10.81,-0.03,0.05,2.97,1.06,0,"1 nonsynonymous","K132E",1
"lib2","SARS-CoV-2","GAACTCACAATAAACG",1,23.7,9.52,-1.32,0.08,2.02,1.02,0,">1 nonsynonymous","K56R N64Y T100D T148G K199P",5
"lib2","SARS-CoV-2","GAACTCACATGTGAAC",5,69.18,9.24,-1.6,0.07,2.86,1.14,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","GAACTCAGAAGGCCAA",1,5.32,6,-4.84,1.9,1.87,1.14,0.02,">1 nonsynonymous","Y93P N107F N120E V180K",4
"lib2","SARS-CoV-2","GAACTCAGACGCGAAC",1,7.81,11.28,0.45,0.09,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACTCAGGCCCCAAA",2,20.37,10.29,-0.55,0.05,2.95,1.02,0,">1 nonsynonymous","A22E A42S E141K",3
"lib2","SARS-CoV-2","GAACTCATAAACAAAA",2,2.87,NA,NA,NA,NA,NA,NA,"stop","N1P G86A F99L F126W L162*",5
"lib2","SARS-CoV-2","GAACTCATTACTGGTT",15,59.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y L60D S139Y",3
"lib2","SARS-CoV-2","GAACTCATTTTTGTAT",7,39.39,7.75,-3.09,0.27,1.5,1.12,0.02,">1 nonsynonymous","W106E S184L P197Q",3
"lib2","SARS-CoV-2","GAACTCCAAAAGATGC",6,67.43,8.53,-2.3,0.1,2.71,1.08,0,">1 nonsynonymous","S45L K87R T170M L188A A192E",5
"lib2","SARS-CoV-2","GAACTCCATGACAAAA",1,14.56,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A89M D137V T148S P161C",4
"lib2","SARS-CoV-2","GAACTCCCAAACTACC",4,68.37,10.8,-0.03,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAACTCCGTAAACATG",1,14.94,9.99,-0.84,0.19,2.56,1.08,0.01,">1 nonsynonymous","C61G G83T",2
"lib2","SARS-CoV-2","GAACTCCTAATCACCT",9,70.33,8.66,-2.18,0.25,1.5,1.18,0.03,">1 nonsynonymous","T100P T201G",2
"lib2","SARS-CoV-2","GAACTCCTAATTTGCT",1,0.34,NA,NA,NA,NA,NA,NA,"stop","L5I D90K N109* C158R",4
"lib2","SARS-CoV-2","GAACTCCTACGTATAA",7,104.8,9.95,-0.88,0.09,2.32,1.04,0,">1 nonsynonymous","W106L T201L",2
"lib2","SARS-CoV-2","GAACTCGAAATAGGAC",7,1.35,NA,NA,NA,NA,NA,NA,"stop","E10P Y35V P54S V103W K132V E141* G152S",7
"lib2","SARS-CoV-2","GAACTCGAACTCAACG",3,83.59,10.76,-0.08,0.05,2.92,1.06,0,">1 nonsynonymous","I2M S43G",2
"lib2","SARS-CoV-2","GAACTCGAATGCCGTA",5,23.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A18G G83D K94G G101M G152A P191W",6
"lib2","SARS-CoV-2","GAACTCGACATATTCC",2,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D F44I A89I",3
"lib2","SARS-CoV-2","GAACTCGACGCAATAG",5,47.14,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I28T C61T A105D",3
"lib2","SARS-CoV-2","GAACTCGAGTAAAAAA",3,21.34,10.64,-0.2,0.09,2.85,1.16,0,">1 nonsynonymous","G9L A33V V37K",3
"lib2","SARS-CoV-2","GAACTCGATACACGTA",4,4.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11Q",1
"lib2","SARS-CoV-2","GAACTCGATCTTTGCA",1,46.85,6.01,-4.83,0.68,1.5,1.21,0.01,">1 nonsynonymous","V37A C61W G146N C158R",4
"lib2","SARS-CoV-2","GAACTCGATGCAATAT",1,21.82,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R78F Y165E P177I",3
"lib2","SARS-CoV-2","GAACTCGCAAGCATAA",7,113.08,10.83,0,0.06,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GAACTCGCCGTAGCCA",6,47.46,8.12,-2.72,0.22,1.5,1,0.02,">1 nonsynonymous","F17A D98C E141T",3
"lib2","SARS-CoV-2","GAACTCGGCAAGTCAC",8,123.08,7.17,-3.67,0.28,1.5,1.18,0.02,">1 nonsynonymous","W23P A105V",2
"lib2","SARS-CoV-2","GAACTCGTAACTAATT",25,183.4,7.9,-2.94,0.11,1.55,1.1,0,">1 nonsynonymous","Y50R T170G",2
"lib2","SARS-CoV-2","GAACTCGTACAATAAT",2,24.27,10.79,-0.05,0.07,2.86,1.19,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","GAACTCTATTAAATCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64W C102N T140H E154R",4
"lib2","SARS-CoV-2","GAACTCTCCGGCGCCC",5,18.25,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L5A F99E V173F",3
"lib2","SARS-CoV-2","GAACTCTGAGAAAAAT",6,103.65,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V37G D137S P177K",3
"lib2","SARS-CoV-2","GAACTCTTACAAAATA",5,0,NA,NA,NA,NA,NA,NA,"stop","L95* E141R",2
"lib2","SARS-CoV-2","GAACTCTTCTTCAGAG",2,6.16,6.99,-3.84,0.54,1.74,1.17,0.05,">1 nonsynonymous","G86W D97P",2
"lib2","SARS-CoV-2","GAACTCTTTAAAGATA",1,18.67,8.2,-2.63,0.26,1.7,1.05,0.02,">1 nonsynonymous","F17P F47L S129K C195M",4
"lib2","SARS-CoV-2","GAACTGAACTCTCAAG",1,48.14,9.4,-1.44,0.09,2.86,1.13,0,">1 nonsynonymous","K48L N157D S200I",3
"lib2","SARS-CoV-2","GAACTGAAGCGAGTAA",3,28.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F47S Y93I N110Y Y121A P197R",5
"lib2","SARS-CoV-2","GAACTGAAGCTAGAAA",1,18.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","GAACTGAATGCAGAAT",3,24,10.84,0.01,0.04,2.91,1.08,0,"1 nonsynonymous","P54V",1
"lib2","SARS-CoV-2","GAACTGACATGAACTA",10,35.45,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","W106L G155Y",2
"lib2","SARS-CoV-2","GAACTGACATTCCTGG",5,113.42,9.76,-1.08,0.07,2.07,1.08,0,">1 nonsynonymous","Y66R S129P",2
"lib2","SARS-CoV-2","GAACTGACTTATCATT",8,88.8,9.54,-1.3,0.09,2.25,1.06,0,">1 nonsynonymous","G9H T46F N64S G116V E141I",5
"lib2","SARS-CoV-2","GAACTGATGCTATAAC",2,4.5,NA,NA,NA,NA,NA,NA,"stop","N4C A14T L57W W106* N120T Q168L",6
"lib2","SARS-CoV-2","GAACTGCAACATGTAT",11,2.72,NA,NA,NA,NA,NA,NA,"stop","P96R H189N T201*",3
"lib2","SARS-CoV-2","GAACTGCCAAAGTATA",5,8.57,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L5M F12D S45D V182L",4
"lib2","SARS-CoV-2","GAACTGCGATTGTCCA",3,0.89,NA,NA,NA,NA,NA,NA,"stop","K26W T85L S113T T140* T148S",5
"lib2","SARS-CoV-2","GAACTGCTAATCCAAT",5,53.07,6.3,-4.54,0.38,3,1.12,0.01,"1 nonsynonymous","N107Y",1
"lib2","SARS-CoV-2","GAACTGGACACATCAC",1,3.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V65G",1
"lib2","SARS-CoV-2","GAACTGGATTCTACAA",5,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P F126H R136Y",3
"lib2","SARS-CoV-2","GAACTGGCAATTTAGG",10,46.49,10.78,-0.05,0.04,2.95,1,0,">1 nonsynonymous","L60Q Q84T",2
"lib2","SARS-CoV-2","GAACTGGGCTTGTTTG",11,176.69,9.26,-1.58,0.03,2.93,1.1,0,">1 nonsynonymous","D97N Y119D",2
"lib2","SARS-CoV-2","GAACTGGTACTCGCAA",5,0.49,NA,NA,NA,NA,NA,NA,"stop","C6* S41P I142M L162*",4
"lib2","SARS-CoV-2","GAACTGGTCGCCAAAT",4,120.42,8.82,-2.02,0.06,2.97,1.09,0,"1 nonsynonymous","N171P",1
"lib2","SARS-CoV-2","GAACTGGTTGCTGAAT",5,54.97,10.03,-0.81,0.1,2.35,1.01,0,"1 nonsynonymous","Y178R",1
"lib2","SARS-CoV-2","GAACTGTAAAACTGCC",13,33.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49Y F70W V181Y",3
"lib2","SARS-CoV-2","GAACTGTAATTGAACA",2,41.67,8.35,-2.49,0.36,1.5,1,0.06,">1 nonsynonymous","V11T T85L R136V",3
"lib2","SARS-CoV-2","GAACTGTATTCAGTTA",4,59.92,7.32,-3.52,0.26,1.5,1.23,0.02,">1 nonsynonymous","Y66I Y93I",2
"lib2","SARS-CoV-2","GAACTGTCCCACACTA",12,222.82,8.97,-1.86,0.07,2.08,1.12,0,">1 nonsynonymous","V37S D112L T140M",3
"lib2","SARS-CoV-2","GAACTGTGAACAAAAG",2,0.46,NA,NA,NA,NA,NA,NA,"stop","F12* L60V K87G",3
"lib2","SARS-CoV-2","GAACTGTTATAATTGT",16,48.82,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I104P C158L",2
"lib2","SARS-CoV-2","GAACTGTTTTTCAAAT",2,5.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","GAACTTAAATTTCTGA",6,42.56,7.38,-3.46,0.21,1.5,1.11,0.01,">1 nonsynonymous","G51D G83D K87V I142Q",4
"lib2","SARS-CoV-2","GAACTTAAGAAGCTTT",5,137.13,8.67,-2.16,0.08,2.67,1.05,0,">1 nonsynonymous","N120E Q176T",2
"lib2","SARS-CoV-2","GAACTTAATCGTTGCA",1,9.79,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","E10L C61S V103A Y123D G152M",5
"lib2","SARS-CoV-2","GAACTTAATTAGAAAG",21,123.2,8.34,-2.5,0.22,1.5,1.08,0.02,">1 nonsynonymous","S43T P96L E141Q",3
"lib2","SARS-CoV-2","GAACTTACATATGACT",3,9.83,9.94,-0.89,0.14,2.59,1.04,0.01,">1 nonsynonymous","K94S T201I",2
"lib2","SARS-CoV-2","GAACTTACCTATATAA",2,39.97,10.6,-0.23,0.13,2.69,1.05,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GAACTTACTTACGCTA",6,159.36,10.18,-0.66,0.04,2.89,1.04,0,">1 nonsynonymous","Y39W N58Q K114S K128F",4
"lib2","SARS-CoV-2","GAACTTACTTCGGTTG",1,40.34,7.64,-3.19,0.21,1.5,1.08,0.01,"1 nonsynonymous","C150T",1
"lib2","SARS-CoV-2","GAACTTATACAAATAA",1,15.64,6,-4.84,2,1.5,1.33,0.08,">1 nonsynonymous","L95F W106K K114M",3
"lib2","SARS-CoV-2","GAACTTATCTTATTTG",1,69.07,8.81,-2.03,0.07,2.89,1.1,0,">1 nonsynonymous","L5Q S45N C61E G174I",4
"lib2","SARS-CoV-2","GAACTTATTACAAACA",2,115.78,10.19,-0.65,0.04,2.86,1.01,0,"1 nonsynonymous","Y121C",1
"lib2","SARS-CoV-2","GAACTTATTTATAAAA",5,3.07,NA,NA,NA,NA,NA,NA,"stop","T148A Y178*",2
"lib2","SARS-CoV-2","GAACTTCCACCTTTGC",12,162.3,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T63A G83V D90P D98C",4
"lib2","SARS-CoV-2","GAACTTCCCAGTCCAA",4,87.68,10.11,-0.72,0.04,2.69,1.03,0,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","GAACTTCTAAAACAAC",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R C61H T85D V103R L131W T170H",6
"lib2","SARS-CoV-2","GAACTTGAACAAGTAG",15,263.17,10.84,0.01,0.05,2.9,1.09,0,"1 nonsynonymous","E154Q",1
"lib2","SARS-CoV-2","GAACTTGAGACCATAA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","S41* G83V A105L R136L",4
"lib2","SARS-CoV-2","GAACTTGAGGTTTAAT",4,79.71,10.26,-0.58,0.06,2.84,1.04,0,">1 nonsynonymous","R16S S29L S41I",3
"lib2","SARS-CoV-2","GAACTTGATTAAACGC",1,42.79,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","K87L D98H V115L Y143P F167A",5
"lib2","SARS-CoV-2","GAACTTGCGCCTTTAC",4,33.53,6.15,-4.69,1,1.5,1.13,0.03,">1 nonsynonymous","R27P P96L P133Y C195S",4
"lib2","SARS-CoV-2","GAACTTGCTGTCATAA",4,8.33,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N1T D59K P96L Q168S S184L",5
"lib2","SARS-CoV-2","GAACTTGGAATAGCTG",18,328.21,10.83,-0.01,0.05,2.98,1.04,0,"1 nonsynonymous","F8W",1
"lib2","SARS-CoV-2","GAACTTGGATCAGGGC",7,3.45,NA,NA,NA,NA,NA,NA,"stop","R25* K114N G152N",3
"lib2","SARS-CoV-2","GAACTTGTATCTGTAA",1,7.51,9.36,-1.48,0.2,2.46,1,0.01,">1 nonsynonymous","I2F Q176L",2
"lib2","SARS-CoV-2","GAACTTTAAAAATCTA",13,224.69,10.57,-0.26,0.02,2.91,1.07,0,"1 nonsynonymous","T100E",1
"lib2","SARS-CoV-2","GAACTTTATACACAAC",11,196.06,9.07,-1.77,0.04,2.92,1.1,0,">1 nonsynonymous","Y119M P133A",2
"lib2","SARS-CoV-2","GAACTTTGACTCCATA",4,40.91,10.11,-0.73,0.1,2.67,1.02,0.01,">1 nonsynonymous","E135R G146S",2
"lib2","SARS-CoV-2","GAACTTTGCACTGGAT",4,138.54,9.17,-1.67,0.05,2.9,1.11,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","GAACTTTTACATGACA",7,67.6,9.92,-0.92,0.04,2.07,1.03,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","GAACTTTTAGTGCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T15V I80N D98R S147W G152* V181A",6
"lib2","SARS-CoV-2","GAACTTTTTATATATC",3,18.26,10.31,-0.53,0.09,3,1,0,"1 nonsynonymous","F62D",1
"lib2","SARS-CoV-2","GAAGAAAAAAAACAAG",8,220.83,10.44,-0.39,0.04,2.94,1.06,0,">1 nonsynonymous","K87S V173R",2
"lib2","SARS-CoV-2","GAAGAAAAAACTTATA",8,6.55,NA,NA,NA,NA,NA,NA,"stop","N64H G86*",2
"lib2","SARS-CoV-2","GAAGAAAAACTATGTG",9,40.74,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","N13L A81T Y119S F126T G166L",5
"lib2","SARS-CoV-2","GAAGAAAACAACCGGT",2,67.37,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45P K114Q F167I P177E",4
"lib2","SARS-CoV-2","GAAGAAAACAAGGTAA",2,36.74,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V32M Y121M E141D P161F",4
"lib2","SARS-CoV-2","GAAGAAAACATTAACT",8,73.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V32K N92R V153E",3
"lib2","SARS-CoV-2","GAAGAAAACCGATGAC",11,1.68,NA,NA,NA,NA,NA,NA,"stop","S53L Y121* I142* P197*",4
"lib2","SARS-CoV-2","GAAGAAAAGGCATACA",3,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70R R127A I142A",3
"lib2","SARS-CoV-2","GAAGAAAATGTCTTTC",2,156.3,10.79,-0.05,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGAAAATTCGATAG",2,20.31,8.71,-2.12,0.23,2.07,1.12,0.02,">1 nonsynonymous","I28C K56Y G146D",3
"lib2","SARS-CoV-2","GAAGAAACCAACATAT",3,4.3,NA,NA,NA,NA,NA,NA,"stop","P7Q C49L P96* G152P P177G",5
"lib2","SARS-CoV-2","GAAGAAACTACAGTGG",1,52.47,8.88,-1.96,0.14,1.86,1.15,0.01,">1 nonsynonymous","F44A E135G G155E",3
"lib2","SARS-CoV-2","GAAGAAAGAAACGTAA",4,90.62,10.6,-0.24,0.06,2.83,1.08,0,"1 nonsynonymous","K56C",1
"lib2","SARS-CoV-2","GAAGAAAGTACTCGTC",7,25.99,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N13A F17R Y178C",3
"lib2","SARS-CoV-2","GAAGAAATCATAGTAC",20,320.96,10.4,-0.44,0.04,2.91,1.04,0,">1 nonsynonymous","E10A N120F",2
"lib2","SARS-CoV-2","GAAGAAATCTATTATT",3,35.05,10.06,-0.78,0.1,2.29,1.01,0,">1 nonsynonymous","Y50W F62D E135M S200Y",4
"lib2","SARS-CoV-2","GAAGAAATTGACGAGG",12,169.61,10.88,0.04,0.04,2.89,1.11,0,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","GAAGAACAACAAGACA",4,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N G9A V71S K87M F185N",5
"lib2","SARS-CoV-2","GAAGAACACCCAATAT",4,28.12,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R25P A33R D90N W106D",4
"lib2","SARS-CoV-2","GAAGAACCACGTTACA",2,35.18,8.75,-2.09,0.05,1.98,1.03,0,">1 nonsynonymous","V71M K132P F156P",3
"lib2","SARS-CoV-2","GAAGAACCATTTAGCG",3,37.51,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Q144W P177Y",2
"lib2","SARS-CoV-2","GAAGAACCCGTATACG",9,65.86,8.3,-2.53,0.12,2.4,1.05,0.01,">1 nonsynonymous","L38F Y119L I142T",3
"lib2","SARS-CoV-2","GAAGAACGGTATGAAT",1,50,9.87,-0.97,0.06,2.83,1.06,0,">1 nonsynonymous","G83S K87V D97I N120I",4
"lib2","SARS-CoV-2","GAAGAACGTTAATTAT",4,16.26,10.7,-0.14,0.09,2.88,1.11,0,"1 nonsynonymous","N64L",1
"lib2","SARS-CoV-2","GAAGAACTAACTATCT",2,23.83,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","I2F T55R A67V F99L L125K E135L V153N",7
"lib2","SARS-CoV-2","GAAGAACTCAAAAAAG",14,0.57,NA,NA,NA,NA,NA,NA,"stop","C49F L60* F160V",3
"lib2","SARS-CoV-2","GAAGAACTTACAACCG",9,63.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N92E D137C",2
"lib2","SARS-CoV-2","GAAGAACTTCTAATAG",3,0.38,NA,NA,NA,NA,NA,NA,"stop","S113A R124* G172R V180E",4
"lib2","SARS-CoV-2","GAAGAACTTGATCATA",5,7.8,NA,NA,NA,NA,NA,NA,"stop","F12N L60* D112* Y121I S139K",5
"lib2","SARS-CoV-2","GAAGAAGAACGGTAGC",3,51.9,8.13,-2.71,0.21,1.5,1.1,0.01,">1 nonsynonymous","T15S S19R V115R S129C",4
"lib2","SARS-CoV-2","GAAGAAGAAGATCTTG",14,253.07,10.75,-0.09,0.02,2.92,1.09,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","GAAGAAGACAGCCCGA",7,16.3,9.47,-1.37,0.08,2.31,1.1,0.01,">1 nonsynonymous","V11A S147R",2
"lib2","SARS-CoV-2","GAAGAAGCATACGTTA",1,12.76,10.4,-0.43,0.07,3,1,0,"1 nonsynonymous","F62D",1
"lib2","SARS-CoV-2","GAAGAAGGATATGTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N107Y N157Q F167* L187K",4
"lib2","SARS-CoV-2","GAAGAAGGCTTCCCAT",5,0.15,NA,NA,NA,NA,NA,NA,"stop","F12T F70I A89L W106S F156*",5
"lib2","SARS-CoV-2","GAAGAAGGTTTTATAA",3,0.86,NA,NA,NA,NA,NA,NA,"stop","T55V I138*",2
"lib2","SARS-CoV-2","GAAGAAGTCATGGATT",11,16.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y21G F62P",2
"lib2","SARS-CoV-2","GAAGAAGTCCCACAAC",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q F62L G86S",3
"lib2","SARS-CoV-2","GAAGAATAAAAATTCA",3,21.84,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","D90P N120L",2
"lib2","SARS-CoV-2","GAAGAATAAAACGCGA",3,11.84,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","V103T L131S",2
"lib2","SARS-CoV-2","GAAGAATAAATTATTC",2,55.44,9.19,-1.65,0.05,2.93,1.04,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","GAAGAATATGAAATTA",6,55.67,6.22,-4.62,0.67,1.5,1.17,0.02,">1 nonsynonymous","D75T Y91S F99I C158L",4
"lib2","SARS-CoV-2","GAAGAATCAATCAATT",9,38.54,9.77,-1.07,0.04,2.86,1.09,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","GAAGAATCAGGCGCAA",11,147.25,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","V37Q G86V",2
"lib2","SARS-CoV-2","GAAGAATCATAGAGAA",1,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K N58C G101E D112G",4
"lib2","SARS-CoV-2","GAAGAATCCTATAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","V103R R124S P169*",3
"lib2","SARS-CoV-2","GAAGAATCCTTGCAAT",5,101.79,10.2,-0.63,0.05,2.81,1.12,0,">1 nonsynonymous","Y35P F47I",2
"lib2","SARS-CoV-2","GAAGAATGACTTAAAT",6,71.27,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S69A N107L",2
"lib2","SARS-CoV-2","GAAGAATGTACTGGAG",1,50.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35G A81K P161K",3
"lib2","SARS-CoV-2","GAAGAATGTATTATGT",5,35.57,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y66L G155T V180Y",3
"lib2","SARS-CoV-2","GAAGAATTACACCCAT",1,6.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26V",1
"lib2","SARS-CoV-2","GAAGAATTAGAAATGC",5,71.64,8.8,-2.04,0.07,2.94,1.11,0,">1 nonsynonymous","N64L T100L G117D",3
"lib2","SARS-CoV-2","GAAGAATTATTATGGA",2,24.65,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","P7T G51S L95A K128Y",4
"lib2","SARS-CoV-2","GAAGAATTATTTAAAA",11,84.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38S F44C D90N N110G P133D",5
"lib2","SARS-CoV-2","GAAGAATTCAAAGGAA",7,18.79,6.29,-4.54,1.05,1.5,1.25,0.04,">1 nonsynonymous","C6I D98E Y178L",3
"lib2","SARS-CoV-2","GAAGAATTGCTTCCAG",5,149,9.82,-1.01,0.05,2.68,1.06,0,">1 nonsynonymous","D90L G155R",2
"lib2","SARS-CoV-2","GAAGAATTGTACTACA",5,0.08,NA,NA,NA,NA,NA,NA,"stop","Y91* N107R K114N",3
"lib2","SARS-CoV-2","GAAGACAAACAAATTC",2,8.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R73H V103P L131H T148L",4
"lib2","SARS-CoV-2","GAAGACAAATACTAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60P P133R P149Y",3
"lib2","SARS-CoV-2","GAAGACAAGACTGTAA",6,102.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E V77G N110T",3
"lib2","SARS-CoV-2","GAAGACAAGATATTCT",7,51.16,9.31,-1.52,0.18,1.66,1.16,0.01,">1 nonsynonymous","V103M Q168S",2
"lib2","SARS-CoV-2","GAAGACAAGCTTAACC",1,20.75,8.02,-2.82,0.43,1.5,1,0.07,">1 nonsynonymous","Y35R I80M K87R",3
"lib2","SARS-CoV-2","GAAGACAATAGAGACC",4,25.43,9.32,-1.51,0.11,2.15,1.05,0,">1 nonsynonymous","N1R F44R T55I E154D",4
"lib2","SARS-CoV-2","GAAGACACATGCTTAC",2,39.89,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N92T G117V",2
"lib2","SARS-CoV-2","GAAGACAGAATGGATT",9,4.05,NA,NA,NA,NA,NA,NA,"stop","V37* Y93L",2
"lib2","SARS-CoV-2","GAAGACAGCTTTAGGG",14,144.87,10.64,-0.2,0.03,2.92,1.09,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","GAAGACAGTACATAGT",7,77.35,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C61V D68R V77L N107L L122Y E135L",6
"lib2","SARS-CoV-2","GAAGACAGTATGCCTA",5,6.71,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","N13V K94Y N107S Y123E K132L",5
"lib2","SARS-CoV-2","GAAGACATCATCCAAT",7,1.78,NA,NA,NA,NA,NA,NA,"stop","D34L S41Y D97* V182W",4
"lib2","SARS-CoV-2","GAAGACATTACGTCCT",6,93.09,10.84,0.01,0.07,2.88,1.14,0,"1 nonsynonymous","S43Y",1
"lib2","SARS-CoV-2","GAAGACATTTTTAGCA",2,53.83,10.24,-0.6,0.08,2.72,1.04,0,">1 nonsynonymous","W106S L122H",2
"lib2","SARS-CoV-2","GAAGACCATGGAAAAG",10,152.76,6,-4.84,1.65,3,1.13,0,">1 nonsynonymous","V37E D112L N130S Y165D",4
"lib2","SARS-CoV-2","GAAGACCATTCCAATA",6,2.26,NA,NA,NA,NA,NA,NA,"stop","N4T Y39K Y123K E135*",4
"lib2","SARS-CoV-2","GAAGACGAAACTCGAG",9,154.78,10.17,-0.66,0.03,2.85,1.1,0,">1 nonsynonymous","A33S C61T N120V",3
"lib2","SARS-CoV-2","GAAGACGACTAAGGCC",3,36.21,8.15,-2.69,0.19,1.78,1.05,0.01,">1 nonsynonymous","F8V V115P Y121P",3
"lib2","SARS-CoV-2","GAAGACGGCCCCATTC",8,111.42,10.19,-0.65,0.03,2.93,1.06,0,">1 nonsynonymous","V65L Y121L S184Q A192D",4
"lib2","SARS-CoV-2","GAAGACGGTCCCCTTA",2,25.12,6,-4.84,2,3,1.08,0,">1 nonsynonymous","N92I G155T",2
"lib2","SARS-CoV-2","GAAGACGTCAATGGTG",3,104.66,9.21,-1.62,0.05,2.77,1.07,0,">1 nonsynonymous","R127S G166V",2
"lib2","SARS-CoV-2","GAAGACGTTAAGGATT",3,10.62,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","G83Y I88S",2
"lib2","SARS-CoV-2","GAAGACTATAAAACTA",2,99.56,9.11,-1.73,0.12,1.54,1.12,0.01,">1 nonsynonymous","T3N F17L A67C",3
"lib2","SARS-CoV-2","GAAGACTCAGTTAATT",5,12.73,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","F99N N107K",2
"lib2","SARS-CoV-2","GAAGACTCCCCCCTAA",4,78.64,10.8,-0.03,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGACTCCCTGCTGC",4,11.62,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91G I104S E141M L162Y",4
"lib2","SARS-CoV-2","GAAGAGAAAAACTAAG",7,35.53,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A33G C61Y D68R L95R",4
"lib2","SARS-CoV-2","GAAGAGACGCATAGCC",3,0.59,NA,NA,NA,NA,NA,NA,"stop","L38* C61M K87R",3
"lib2","SARS-CoV-2","GAAGAGATAATATTAA",3,91.7,10.39,-0.45,0.05,2.91,1.07,0,">1 nonsynonymous","N13A T55N",2
"lib2","SARS-CoV-2","GAAGAGATTACAATGG",1,17.25,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","F44C Y91D N130F",3
"lib2","SARS-CoV-2","GAAGAGCATGATAGGG",5,46.73,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y91V F134C E141G",3
"lib2","SARS-CoV-2","GAAGAGGAGAACACAG",5,44.17,10.28,-0.55,0.08,2.13,1.06,0,">1 nonsynonymous","V77R D97S T201L",3
"lib2","SARS-CoV-2","GAAGAGGGAACCCGCG",5,26.04,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A105G Y143E P149L",3
"lib2","SARS-CoV-2","GAAGAGGTATACGACT",1,11.61,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y121T R136C",2
"lib2","SARS-CoV-2","GAAGAGTTATAAATAA",23,201.12,9.6,-1.24,0.08,1.88,1.03,0,">1 nonsynonymous","G51H L122G P133D",3
"lib2","SARS-CoV-2","GAAGAGTTGTCTACAT",11,182.84,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37E N107W A145D C158E Y165G",5
"lib2","SARS-CoV-2","GAAGATAACGTAGTCG",6,112.1,10.88,0.04,0.06,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGATAATAATGGAT",1,16.34,9.26,-1.57,0.09,3,1.03,0,">1 nonsynonymous","T170K G174L",2
"lib2","SARS-CoV-2","GAAGATAATATAACGC",10,48.91,6.29,-4.55,0.6,1.5,1.09,0.01,">1 nonsynonymous","D75R P96T G117M",3
"lib2","SARS-CoV-2","GAAGATACCCGACTAA",1,6.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D34G F62L D98Y K132S C158R",5
"lib2","SARS-CoV-2","GAAGATACTATAATAC",2,61.24,10.48,-0.35,0.06,2.96,1.03,0,">1 nonsynonymous","S43N P133S",2
"lib2","SARS-CoV-2","GAAGATAGAGAGTGAA",4,60.94,10.17,-0.67,0.04,2.98,1.04,0,">1 nonsynonymous","C6S R16D",2
"lib2","SARS-CoV-2","GAAGATAGAGGCGTTT",3,25.76,10.89,0.06,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGATAGCACCAGAA",8,117.24,10.77,-0.06,0.06,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGATAGGACACAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S T100F P133E",3
"lib2","SARS-CoV-2","GAAGATAGGGATACAA",1,57.72,6,-4.84,0.69,3,1.13,0,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","GAAGATATCACCGGAG",7,72.34,8.58,-2.26,0.22,1.5,1.1,0.02,">1 nonsynonymous","Y21G K114T",2
"lib2","SARS-CoV-2","GAAGATATCATCCTTA",3,37.18,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4G G101P S129P I138C",4
"lib2","SARS-CoV-2","GAAGATATCCTAAGAC",2,21.68,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","I2S P96H W106P",3
"lib2","SARS-CoV-2","GAAGATATGAGCCACA",6,112.33,9.77,-1.07,0.02,2.87,1.08,0,">1 nonsynonymous","A14E T170A",2
"lib2","SARS-CoV-2","GAAGATATTAAATAAG",2,5.74,10.55,-0.28,0.67,2.93,1,0,">1 nonsynonymous","Y39M N110K G146R Y178F",4
"lib2","SARS-CoV-2","GAAGATCAAATAACCA",16,111.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K94F G155L R179N",3
"lib2","SARS-CoV-2","GAAGATCAAGCAAGAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A Y50L P96R N110M Y143L F156T",6
"lib2","SARS-CoV-2","GAAGATCCAACGATGT",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L V103D",2
"lib2","SARS-CoV-2","GAAGATCCGCACATAA",9,59.62,6.01,-4.83,0.83,1.5,1.18,0.01,">1 nonsynonymous","D59V N120V I142M F185S",4
"lib2","SARS-CoV-2","GAAGATCGATATATTT",13,218.69,10.69,-0.14,0.02,2.96,1.04,0,">1 nonsynonymous","V37G N58R Y123K",3
"lib2","SARS-CoV-2","GAAGATCTAGACGAGG",10,132.11,10.52,-0.32,0.05,2.89,1.09,0,">1 nonsynonymous","E10S V115N",2
"lib2","SARS-CoV-2","GAAGATCTATATATAT",1,26.05,10.78,-0.06,0.07,2.96,1,0,">1 nonsynonymous","Y35I N58Y S139N",3
"lib2","SARS-CoV-2","GAAGATCTTATCACTA",8,106.03,10.03,-0.8,0.09,2.28,1.03,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","GAAGATGCAAAGTCAT",1,1.78,NA,NA,NA,NA,NA,NA,"stop","V11C A33* T55H T85S",4
"lib2","SARS-CoV-2","GAAGATGCCTAGACAA",1,5.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46F",1
"lib2","SARS-CoV-2","GAAGATGCCTTGCATT",4,56.39,6,-4.84,1.65,1.5,1.3,0.02,">1 nonsynonymous","S36F V37P C49R Y91R P133G E141M",6
"lib2","SARS-CoV-2","GAAGATGCTACATTAT",3,123.93,10.15,-0.69,0.03,2.88,1.03,0,">1 nonsynonymous","T15L T55N F160L",3
"lib2","SARS-CoV-2","GAAGATGGAATATAGA",4,0,NA,NA,NA,NA,NA,NA,"stop","F62* D112* C150R",3
"lib2","SARS-CoV-2","GAAGATGTATGTAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","N13M A18Q S41N L57S L131Q S200*",6
"lib2","SARS-CoV-2","GAAGATGTCTATATCA",10,56.97,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D90C I104H N130G R136M Q176R",5
"lib2","SARS-CoV-2","GAAGATTACGGGTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* C150F",2
"lib2","SARS-CoV-2","GAAGATTAGCAAGGCC",7,47.67,9.91,-0.93,0.09,2.03,1.13,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","GAAGATTAGTCAAACG",5,203.57,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F70L G86F P177I",3
"lib2","SARS-CoV-2","GAAGATTATAAAGACA",3,62.87,10.71,-0.13,0.05,2.95,1.08,0,">1 nonsynonymous","V37A S45E L60S",3
"lib2","SARS-CoV-2","GAAGATTATTGGCATA",5,44.03,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","N58L P133K Y178L",3
"lib2","SARS-CoV-2","GAAGATTCAGAAATAA",4,33.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E10G T100F S113W G152C",4
"lib2","SARS-CoV-2","GAAGATTCAGTGCATA",5,17.32,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","N92M F99T Q144T",3
"lib2","SARS-CoV-2","GAAGATTCATTAACAC",8,92.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S69C G117V Q176L",3
"lib2","SARS-CoV-2","GAAGATTGACTGTAGG",2,297.54,10.76,-0.07,0.03,2.98,1.04,0,">1 nonsynonymous","L5S A190H",2
"lib2","SARS-CoV-2","GAAGATTGGGTTCCAC",3,155.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37S N92T",2
"lib2","SARS-CoV-2","GAAGATTTTAATACCA",8,71.07,10.73,-0.11,0.04,2.96,1.05,0,">1 nonsynonymous","G9Q C61H",2
"lib2","SARS-CoV-2","GAAGATTTTAGTCAAG",4,27.84,6,-4.84,2,3,1.04,0,">1 nonsynonymous","W23S Y119L Q144F",3
"lib2","SARS-CoV-2","GAAGCAAAAAAAGCGA",10,66.11,6,-4.84,1.42,1.5,1.21,0.02,">1 nonsynonymous","N4S Y39L V103S",3
"lib2","SARS-CoV-2","GAAGCAAAATAACCCA",10,70.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T15Q N40P L60T F99Y A105R",5
"lib2","SARS-CoV-2","GAAGCAACATGATATA",3,54.16,9.63,-1.21,0.11,2.09,1.08,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GAAGCAACCGAATATC",4,47.87,10.88,0.05,0.08,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGCAAGTGAGTTAT",2,23.37,9.69,-1.14,0.12,2.29,1.03,0.01,">1 nonsynonymous","T148F L162M S200N",3
"lib2","SARS-CoV-2","GAAGCAATAGGTTGAA",1,18.48,10.74,-0.1,0.08,2.86,1.18,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","GAAGCAATGAATAATT",4,1.18,NA,NA,NA,NA,NA,NA,"stop","D112F A192*",2
"lib2","SARS-CoV-2","GAAGCAATGATAAGTA",7,43.94,6,-4.84,2,3,1.2,0,">1 nonsynonymous","K56G L95M D137R",3
"lib2","SARS-CoV-2","GAAGCACAATAAGCGG",15,67.71,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","I72G F99M L122K",3
"lib2","SARS-CoV-2","GAAGCACAATTGAAAT",4,100.73,8.44,-2.4,0.1,2.08,1.05,0,">1 nonsynonymous","R78H A89Y Y175H",3
"lib2","SARS-CoV-2","GAAGCACACATTGGCA",4,28.99,8.25,-2.59,0.14,1.8,1.09,0.01,">1 nonsynonymous","K87I N107Q L122M S139A V180M",5
"lib2","SARS-CoV-2","GAAGCACAGTCAATAA",8,66.28,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","D98A D137L",2
"lib2","SARS-CoV-2","GAAGCACATACCATGG",16,203.63,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S36M N58L L95P Y121I Y159C",5
"lib2","SARS-CoV-2","GAAGCACCAGTAATTT",3,56.1,10.82,-0.01,0.05,2.97,1.04,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","GAAGCACCTCATAACT",9,97.87,10.15,-0.69,0.05,2.91,1,0,">1 nonsynonymous","C6V G146S",2
"lib2","SARS-CoV-2","GAAGCACTTAATACGG",3,91.32,8.55,-2.29,0.1,2.97,1.04,0,">1 nonsynonymous","Y119P Y143M",2
"lib2","SARS-CoV-2","GAAGCAGAAAACGTTT",3,9.73,10.34,-0.5,0.11,2.7,1.03,0.01,"1 nonsynonymous","Y35H",1
"lib2","SARS-CoV-2","GAAGCAGACACCACAG",4,132.71,8.48,-2.36,0.09,2.53,1.04,0,">1 nonsynonymous","P7Q L60R T85R Y119F G152F",5
"lib2","SARS-CoV-2","GAAGCAGATATAGATA",6,130.9,8.69,-2.15,0.07,3,1.06,0,">1 nonsynonymous","K87N Y119L",2
"lib2","SARS-CoV-2","GAAGCAGGCATTCCGA",1,17.75,6,-4.84,2,1.5,1.12,0.08,">1 nonsynonymous","Y35V P82L S113K",3
"lib2","SARS-CoV-2","GAAGCAGTATGATATA",11,83.88,6,-4.84,0.77,3,1.09,0,">1 nonsynonymous","R127F A145V F160L K198L",4
"lib2","SARS-CoV-2","GAAGCAGTCGATTTCA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4E A81S N157C P197M",4
"lib2","SARS-CoV-2","GAAGCAGTGATCTAAC",16,63.76,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C49S G74Q K128E P149T",4
"lib2","SARS-CoV-2","GAAGCATAGGAAAGTA",5,2.46,NA,NA,NA,NA,NA,NA,"stop","E10K D34*",2
"lib2","SARS-CoV-2","GAAGCATCCGCTCGAA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C N24L S36K Y123S S139A",5
"lib2","SARS-CoV-2","GAAGCATCCTCTGACA",3,58.03,10.49,-0.34,0.05,2.93,1.07,0,">1 nonsynonymous","V37S C61Y G83L",3
"lib2","SARS-CoV-2","GAAGCATTAAGATAAT",5,120.18,10.83,0,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGCCAACCGGCAAG",5,40.46,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S43C K56T I88Q E135N Y143S",5
"lib2","SARS-CoV-2","GAAGCCACCGGGTCCA",2,7.52,6,-4.84,2,1.5,1.05,0.04,">1 nonsynonymous","A14T N64V S113L S139T",4
"lib2","SARS-CoV-2","GAAGCCAGAACTGCCT",10,51.16,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T100P D112T",2
"lib2","SARS-CoV-2","GAAGCCAGATGTTTGG",6,58.48,6.08,-4.76,1.15,1.5,1.23,0.03,">1 nonsynonymous","F99D Y143L G174Q",3
"lib2","SARS-CoV-2","GAAGCCAGCAATCACG",3,29.81,6,-4.84,2,3,1.08,0,"1 nonsynonymous","F70S",1
"lib2","SARS-CoV-2","GAAGCCAGGACTCATA",3,23.31,9.31,-1.53,0.14,1.89,1.02,0.01,">1 nonsynonymous","F8K A14G",2
"lib2","SARS-CoV-2","GAAGCCATAGAGCCGG",36,291.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P54F I88Y A105M",3
"lib2","SARS-CoV-2","GAAGCCCCCCTCTAGA",5,43.11,6,-4.84,1.32,3,1.11,0,">1 nonsynonymous","L57N K128P Y143I S164Y P177S",5
"lib2","SARS-CoV-2","GAAGCCCCCCTCTAGT",2,26.59,10.02,-0.82,0.11,2.33,1,0.01,">1 nonsynonymous","F8L P82I",2
"lib2","SARS-CoV-2","GAAGCCCTAACACCCG",7,26.27,6,-4.84,2,3,1.08,0,">1 nonsynonymous","P7I D90T D112G G117R T148M S200T",6
"lib2","SARS-CoV-2","GAAGCCCTGACGGAAC",5,86.69,10.71,-0.13,0.05,2.95,1.07,0,">1 nonsynonymous","T55I N151Y",2
"lib2","SARS-CoV-2","GAAGCCGCAACTAAGT",4,51.69,10.72,-0.11,0.05,2.94,1.07,0,">1 nonsynonymous","N58T P197G",2
"lib2","SARS-CoV-2","GAAGCCGGCCCCAATA",9,146.72,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y21M Q84S D90S Y121W C150H F160A Q176E",7
"lib2","SARS-CoV-2","GAAGCCGTACTTAATA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87D E141S P177M V182Y",4
"lib2","SARS-CoV-2","GAAGCCTGGAACCACT",21,187.81,10.58,-0.26,0.04,2.95,1.06,0,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","GAAGCGAAATAGACGT",21,160.45,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N4A F44L P96L T201I",4
"lib2","SARS-CoV-2","GAAGCGAATATCTGTA",12,106.96,8.3,-2.54,0.11,1.6,1.12,0,">1 nonsynonymous","F12L F17L N110D F134D",4
"lib2","SARS-CoV-2","GAAGCGACGCCAGCGG",10,41.43,10.83,0,0.05,2.88,1.14,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","GAAGCGATGTCCGATA",1,27.34,10.01,-0.83,0.22,2.72,1,0.03,">1 nonsynonymous","S41V F156V",2
"lib2","SARS-CoV-2","GAAGCGCAAATAAGAA",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R G51C D97V N110L",4
"lib2","SARS-CoV-2","GAAGCGCAGTCTACGC",3,23.73,7.87,-2.97,0.51,1.96,1.25,0.06,">1 nonsynonymous","N1K A105K A192V",3
"lib2","SARS-CoV-2","GAAGCGCATCCGGACC",9,59.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W A81M G117V",3
"lib2","SARS-CoV-2","GAAGCGCATTTTTAAC",10,98.5,10.48,-0.36,0.04,2.9,1.09,0,">1 nonsynonymous","N58T G152S",2
"lib2","SARS-CoV-2","GAAGCGCCACTGAAAT",5,0,NA,NA,NA,NA,NA,NA,"stop","Q84R P96T G116S K198*",4
"lib2","SARS-CoV-2","GAAGCGGAAAACTGTA",3,94.82,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V32N L60S Y91T L95P G101S Q163D",6
"lib2","SARS-CoV-2","GAAGCGGAAGAAGAAA",4,1.67,NA,NA,NA,NA,NA,NA,"stop","T3N V32T Y39N Q84* Y93F N109K P177* L187*",8
"lib2","SARS-CoV-2","GAAGCGGATAGCTACA",1,32.45,10.73,-0.11,0.05,2.82,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGCGTCTTTGTACT",3,8.25,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","GAAGCGTTAGGTTCGG",2,24.37,8.6,-2.24,0.2,1.5,1.11,0.02,">1 nonsynonymous","L5E D68F K128H T148G",4
"lib2","SARS-CoV-2","GAAGCTAATACTATTA",3,1.82,NA,NA,NA,NA,NA,NA,"stop","C61T A67L G83F A105N C150R T170Y K198*",7
"lib2","SARS-CoV-2","GAAGCTAGGCCTACCT",6,56.79,10.82,-0.02,0.07,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGCTATATGAACTT",7,60.17,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","Y50K A89H S129G S200Y",4
"lib2","SARS-CoV-2","GAAGCTATGATCAACG",4,71.21,10.79,-0.05,0.05,2.97,1.05,0,"1 nonsynonymous","N58Q",1
"lib2","SARS-CoV-2","GAAGCTATGGAGAACT",20,35.27,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","I2L P82S K87N Y91A V103N R136Y",6
"lib2","SARS-CoV-2","GAAGCTATTACCATTT",4,52.83,9.49,-1.34,0.11,1.98,1.03,0.01,">1 nonsynonymous","D90S P133R",2
"lib2","SARS-CoV-2","GAAGCTATTATAAGTA",11,12.26,NA,NA,NA,NA,NA,NA,"stop","R27* K56S N64S P149F",4
"lib2","SARS-CoV-2","GAAGCTCACTTATAGA",4,56.84,10.32,-0.52,0.05,2.89,1,0,"1 nonsynonymous","S45F",1
"lib2","SARS-CoV-2","GAAGCTCAGACACCAA",9,155.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17D R73A T85V N120R C158V",5
"lib2","SARS-CoV-2","GAAGCTCAGCAATGTC",10,63.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T15M Y143G C158V",3
"lib2","SARS-CoV-2","GAAGCTCATATATAAG",5,42.02,9.33,-1.51,0.1,2,1.09,0.01,">1 nonsynonymous","F12S S36M C61N P149T",4
"lib2","SARS-CoV-2","GAAGCTCCCTGAAATA",1,24.25,8.17,-2.67,0.29,1.9,1.14,0.02,">1 nonsynonymous","N40R Q144T C158R",3
"lib2","SARS-CoV-2","GAAGCTGACAGGTGTA",11,36.08,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","GAAGCTGCTCTTAAAT",4,33.92,9.57,-1.27,0.12,1.99,1,0.01,">1 nonsynonymous","G9A D68T",2
"lib2","SARS-CoV-2","GAAGCTGTCCAAGGTG",3,59.93,8.45,-2.39,0.14,2.96,1.02,0.01,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","GAAGCTTAACGTCCAA",1,20.24,10.24,-0.59,0.06,3,1.03,0,">1 nonsynonymous","V11F L60M",2
"lib2","SARS-CoV-2","GAAGCTTATACACAGG",5,33.49,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6S D59L P82N D98A",4
"lib2","SARS-CoV-2","GAAGCTTATACTTTCG",11,164.1,8.38,-2.46,0.21,1.5,1.05,0.02,">1 nonsynonymous","N107W V153E",2
"lib2","SARS-CoV-2","GAAGCTTTAATGCGGA",4,69.64,10.05,-0.78,0.06,2.46,1.09,0,">1 nonsynonymous","D34R D97R",2
"lib2","SARS-CoV-2","GAAGCTTTCAACATTA",5,45.17,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12K K94S P149N F185G",4
"lib2","SARS-CoV-2","GAAGGAAAACTGAACC",8,19.28,7.09,-3.75,0.48,1.85,1.14,0.05,">1 nonsynonymous","F8M V20C N64R D90Q G155K Q168S",6
"lib2","SARS-CoV-2","GAAGGAAACTTCCTCG",1,0,NA,NA,NA,NA,NA,NA,"stop","G83Q V103H S113L Y119*",4
"lib2","SARS-CoV-2","GAAGGAAATTATGGGC",2,52.47,10.8,-0.04,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGGAACGGGAAAGA",2,21.29,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","C49S Q144G N157R",3
"lib2","SARS-CoV-2","GAAGGAACGTATACTA",1,21.28,7.56,-3.28,0.33,1.5,1.17,0.03,">1 nonsynonymous","Y35I G86K",2
"lib2","SARS-CoV-2","GAAGGAACTATTTACA",1,68.14,9.76,-1.08,0.07,2.04,1.01,0,">1 nonsynonymous","A81T N151I",2
"lib2","SARS-CoV-2","GAAGGAAGAAGCATTA",2,8.36,7.35,-3.49,0.44,1.5,1.18,0.04,">1 nonsynonymous","T85A Y123G E141I",3
"lib2","SARS-CoV-2","GAAGGAAGTAGACCCA",7,108.35,10.6,-0.23,0.05,2.93,1.03,0,">1 nonsynonymous","Y123M S139T",2
"lib2","SARS-CoV-2","GAAGGAAGTGACTGAA",12,202.55,9.84,-1,0.04,2.94,1.06,0,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","GAAGGAAGTGATTAAG",1,16.93,8.59,-2.24,0.09,2.88,1.08,0,">1 nonsynonymous","A145H F156S Y178H",3
"lib2","SARS-CoV-2","GAAGGAATACAAACAT",10,1.47,NA,NA,NA,NA,NA,NA,"stop","C6G Y91* D98W N157Y T201Q",5
"lib2","SARS-CoV-2","GAAGGAATATACTTGT",6,128.07,9.29,-1.55,0.07,2.34,1.1,0,">1 nonsynonymous","F44L D75V",2
"lib2","SARS-CoV-2","GAAGGAATCACTATTT",3,131.66,10.18,-0.66,0.05,2.85,1.04,0,">1 nonsynonymous","G152D Y178S",2
"lib2","SARS-CoV-2","GAAGGACAAACTAGAC",17,147.45,9.44,-1.39,0.08,2.19,1.09,0,">1 nonsynonymous","L95M G152I",2
"lib2","SARS-CoV-2","GAAGGACAGCAAACGT",4,0.81,NA,NA,NA,NA,NA,NA,"stop","Y21I F47* A105* G146R",4
"lib2","SARS-CoV-2","GAAGGACGAGGACGAA",7,1.92,NA,NA,NA,NA,NA,NA,"stop","W23* D98F",2
"lib2","SARS-CoV-2","GAAGGACGAGTAAATA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M I28F V103M D112V C150S",5
"lib2","SARS-CoV-2","GAAGGACGCTCACATA",4,1.12,NA,NA,NA,NA,NA,NA,"stop","V103T Y123* E135T P149R V180H",5
"lib2","SARS-CoV-2","GAAGGACTAAAATCGC",5,326.94,8.98,-1.86,0.04,2.82,1.07,0,">1 nonsynonymous","A33T K56V Y119T",3
"lib2","SARS-CoV-2","GAAGGACTACAATTGC",1,19.88,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","Y35W D68F Q84R P96N W106F",5
"lib2","SARS-CoV-2","GAAGGACTAGGCCATA",2,22.2,7.05,-3.79,0.5,1.5,1.04,0.04,">1 nonsynonymous","S36I A42N C61G V103W F160C",5
"lib2","SARS-CoV-2","GAAGGACTCAATACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16Y S41* A81G C102V G116R Y121S Q144N Q168Y",8
"lib2","SARS-CoV-2","GAAGGAGCTTTTTTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","N24A S129E S147I Y175*",4
"lib2","SARS-CoV-2","GAAGGAGGTTACTTCA",4,0.79,NA,NA,NA,NA,NA,NA,"stop","R16* S43T L57* G83H",4
"lib2","SARS-CoV-2","GAAGGAGTGTAATATC",5,12.02,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","GAAGGATAAGAGAATC",5,4.15,NA,NA,NA,NA,NA,NA,"stop","C6A L122S Y159* P177T",4
"lib2","SARS-CoV-2","GAAGGATAGCGTTAAT",4,0.59,NA,NA,NA,NA,NA,NA,"stop","P82* Y119L Q176V",3
"lib2","SARS-CoV-2","GAAGGATATAAGAAAT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28G V52P C61R G86S W106A",5
"lib2","SARS-CoV-2","GAAGGATATACTTAAT",9,86.9,9.95,-0.88,0.08,2.29,1,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","GAAGGATCTTATACCC",7,41.69,9.41,-1.43,0.13,2.15,1.04,0.01,">1 nonsynonymous","A33L V77L K87A",3
"lib2","SARS-CoV-2","GAAGGATTATTAAATA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4T E10V K94* Q144H P161Q",5
"lib2","SARS-CoV-2","GAAGGATTTAACTACT",3,15.8,9.01,-1.83,0.24,1.62,1.05,0.04,">1 nonsynonymous","T15V D90F T100S",3
"lib2","SARS-CoV-2","GAAGGATTTTTCTTAG",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M W106L V153H Q176M",4
"lib2","SARS-CoV-2","GAAGGCAAAACAGTGG",6,153.53,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3E A14D V32F N64M Y119K F134K",6
"lib2","SARS-CoV-2","GAAGGCAATGATGGGA",4,18.77,10.79,-0.05,0.1,3,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGGCACGCGTGGAT",11,161.34,8.51,-2.32,0.06,2.54,1.07,0,">1 nonsynonymous","L5R Y121S G174H",3
"lib2","SARS-CoV-2","GAAGGCAGAGGTCTCG",5,13.4,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y50S G86R Q168L",3
"lib2","SARS-CoV-2","GAAGGCATATAATGAT",1,20.57,10.76,-0.08,0.04,2.9,1.13,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","GAAGGCCACTAAATTA",3,45.65,10.72,-0.12,0.07,2.8,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGGCCACTGCGATA",13,198.68,8.29,-2.54,0.09,2.38,1.06,0,">1 nonsynonymous","F44C N157S",2
"lib2","SARS-CoV-2","GAAGGCCATAGCAAAT",6,12.63,NA,NA,NA,NA,NA,NA,"stop","F44G G51S V77* I104Y S129N R179S",6
"lib2","SARS-CoV-2","GAAGGCGGAGTGCCTA",7,42.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63N D97V L122P",3
"lib2","SARS-CoV-2","GAAGGCTAATCAGCCG",3,41.81,10.49,-0.35,0.08,2.79,1.13,0,">1 nonsynonymous","N4A F12L T201C",3
"lib2","SARS-CoV-2","GAAGGCTGGCCCAGTA",6,101.11,8.71,-2.13,0.08,2.85,1.12,0,">1 nonsynonymous","C61D A105S Y119L",3
"lib2","SARS-CoV-2","GAAGGCTTAAATATTG",11,144.73,10.87,0.04,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGGCTTTTATGCTG",2,50.66,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40I F47L T85M G116Y E141F T170Y V173I",7
"lib2","SARS-CoV-2","GAAGGGAACTAACGAA",1,14.61,7.77,-3.07,0.27,1.5,1.03,0.02,">1 nonsynonymous","L5F E154P L162S",3
"lib2","SARS-CoV-2","GAAGGGACTGTGTGGG",3,35.52,9.56,-1.27,0.08,2.5,1.02,0,"1 nonsynonymous","Y121R",1
"lib2","SARS-CoV-2","GAAGGGAGACTAGCAT",6,22.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V77I V180D",2
"lib2","SARS-CoV-2","GAAGGGATGACCAAAC",7,158.34,10.85,0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGGGCATCCACATA",1,9.09,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8S A14F I104W",3
"lib2","SARS-CoV-2","GAAGGGCCGATGTTAA",6,55.25,7.52,-3.32,0.25,1.56,1.13,0.02,"1 nonsynonymous","G172C",1
"lib2","SARS-CoV-2","GAAGGGCGTAACACAA",17,196.22,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5D Y39M G51D D90V W106P N151T",6
"lib2","SARS-CoV-2","GAAGGGGAATCAAATG",12,134.83,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S36V A89F N157K",3
"lib2","SARS-CoV-2","GAAGGGGAGGTTACTA",10,106.28,9.44,-1.4,0.06,1.99,1.06,0,">1 nonsynonymous","G116P Y123M T140C G196R",4
"lib2","SARS-CoV-2","GAAGGGTACAATAGTA",2,94.3,9.7,-1.14,0.08,2.36,1,0,">1 nonsynonymous","C6S N40M I104L",3
"lib2","SARS-CoV-2","GAAGGGTATACGCCGA",13,45.91,6,-4.84,0.64,3,1.09,0,">1 nonsynonymous","K26L K56Y Y91L L122P",4
"lib2","SARS-CoV-2","GAAGGGTGGTAACTAC",5,0.9,NA,NA,NA,NA,NA,NA,"stop","Y39E G117*",2
"lib2","SARS-CoV-2","GAAGGGTTGCACGATG",4,55.4,9.87,-0.96,0.06,2.14,1.03,0,">1 nonsynonymous","Y39W W106V",2
"lib2","SARS-CoV-2","GAAGGTAAAATCGCTG",6,49.72,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19M T100R N107W",3
"lib2","SARS-CoV-2","GAAGGTAACTCAAAAA",2,9.73,10.21,-0.63,0.1,2.84,1.17,0.01,">1 nonsynonymous","N4M K87M",2
"lib2","SARS-CoV-2","GAAGGTAAGAAGAAAA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E R78V P82V N92A T100L K128W R179A",7
"lib2","SARS-CoV-2","GAAGGTACAGCCGGCT",1,22.12,10.35,-0.48,0.07,3,1.04,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","GAAGGTATACGTTCCA",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F D98T",2
"lib2","SARS-CoV-2","GAAGGTATTACGACAC",2,26.03,10.74,-0.09,0.07,2.86,1.16,0,">1 nonsynonymous","D97W F160S",2
"lib2","SARS-CoV-2","GAAGGTCTTTAGATAC",12,123.04,7,-3.84,0.35,1.5,1.15,0.02,">1 nonsynonymous","E10P D98M Y119W K128N Q163L",5
"lib2","SARS-CoV-2","GAAGGTGTAATTGTTT",2,16.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5V S45L E141V L183I",4
"lib2","SARS-CoV-2","GAAGGTTATAAGCGTG",4,25.78,10.85,0.01,0.06,2.93,1.05,0,"1 nonsynonymous","L60A",1
"lib2","SARS-CoV-2","GAAGGTTATCAAGTTA",13,287.24,9.22,-1.62,0.04,2.89,1.1,0,">1 nonsynonymous","Q168L T201Y",2
"lib2","SARS-CoV-2","GAAGGTTGCAACTCCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127T Q144T",2
"lib2","SARS-CoV-2","GAAGTAAACAAACCGA",10,44.51,9.84,-0.99,0.06,2.24,1.05,0,">1 nonsynonymous","A81N S139G F160R",3
"lib2","SARS-CoV-2","GAAGTAAACACGAATT",8,55.9,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","C61V D68L",2
"lib2","SARS-CoV-2","GAAGTAAAGCGCCAAC",6,52.53,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4K P7H S19G V37N N107T Y175V",6
"lib2","SARS-CoV-2","GAAGTAAATTTTTGAA",2,18.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T P177M",2
"lib2","SARS-CoV-2","GAAGTAACAAATTAAC",7,132.52,10.81,-0.03,0.05,2.84,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTAACTCGAAACG",5,134.85,10.17,-0.66,0.08,2.56,1,0,">1 nonsynonymous","E10D L60N L95V E141R",4
"lib2","SARS-CoV-2","GAAGTAACTTCCGAAT",5,25.36,10.04,-0.8,0.23,1.75,1.02,0.03,">1 nonsynonymous","L5T E141T F185S",3
"lib2","SARS-CoV-2","GAAGTAAGGCAATAAA",2,10.74,9.32,-1.51,0.05,2.99,1,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","GAAGTAAGGGTGAAAT",9,0.19,NA,NA,NA,NA,NA,NA,"stop","I28V R127*",2
"lib2","SARS-CoV-2","GAAGTAAGTTACAATC",5,54.22,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","T3Q Y39Q R73T I88L D112G K199R",6
"lib2","SARS-CoV-2","GAAGTAATTCCAAAAG",4,125.33,10.53,-0.31,0.05,2.92,1.02,0,">1 nonsynonymous","S41Y D98M",2
"lib2","SARS-CoV-2","GAAGTAATTTTCGACA",6,92.45,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T46W N64M N92D S113T V153I",5
"lib2","SARS-CoV-2","GAAGTACAGTAGGATT",8,102.78,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R73F Y143S N157T K198E",4
"lib2","SARS-CoV-2","GAAGTACATCAATATT",9,162.73,10.84,0,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTACATCTAGTAA",1,9.1,NA,NA,NA,NA,NA,0.48,">1 nonsynonymous","N4R Q79T D98V Q176C",4
"lib2","SARS-CoV-2","GAAGTACCAAAGGAAT",3,16.92,6.38,-4.46,0.78,1.5,1.04,0.06,">1 nonsynonymous","Y35V D68P G117T",3
"lib2","SARS-CoV-2","GAAGTACCACGGGACC",3,67.31,10.74,-0.09,0.06,2.91,1.12,0,"1 nonsynonymous","S164N",1
"lib2","SARS-CoV-2","GAAGTACCAGATATTA",8,0.31,NA,NA,NA,NA,NA,NA,"stop","C61* G86C",2
"lib2","SARS-CoV-2","GAAGTACCAGCGCGAA",2,16.65,10.45,-0.38,0.05,2.94,1.01,0,">1 nonsynonymous","D59V A192T",2
"lib2","SARS-CoV-2","GAAGTACGCCCGAAAA",3,63.1,10.71,-0.13,0.04,2.91,1.05,0,"1 nonsynonymous","A42Y",1
"lib2","SARS-CoV-2","GAAGTACTATACAATC",7,1.12,NA,NA,NA,NA,NA,NA,"stop","K114* Y165S",2
"lib2","SARS-CoV-2","GAAGTACTATCCAAAA",12,1.81,NA,NA,NA,NA,NA,NA,"stop","F12I F44N F156D V181*",4
"lib2","SARS-CoV-2","GAAGTACTTGAGACCG",3,124.83,10.63,-0.2,0.04,2.88,1.1,0,">1 nonsynonymous","A14R S200L",2
"lib2","SARS-CoV-2","GAAGTAGAAACAGCGA",4,0.13,NA,NA,NA,NA,NA,NA,"stop","L5* C61S K114M S139V",4
"lib2","SARS-CoV-2","GAAGTAGACTACAATA",3,58.02,8.22,-2.61,0.14,2.39,1.05,0.01,">1 nonsynonymous","A18E T170I",2
"lib2","SARS-CoV-2","GAAGTAGGAATCTCGA",2,14.76,10.59,-0.25,0.08,2.84,1.06,0,">1 nonsynonymous","A14K D98S",2
"lib2","SARS-CoV-2","GAAGTAGTTAAGAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T K87I N171Q",3
"lib2","SARS-CoV-2","GAAGTATAAACAGTGG",5,231.81,8.09,-2.75,0.12,1.82,1.11,0.01,">1 nonsynonymous","N24S D98P S113Q",3
"lib2","SARS-CoV-2","GAAGTATAGATTGTAG",7,129.42,10.81,-0.02,0.05,2.95,1.06,0,">1 nonsynonymous","L5T R73K",2
"lib2","SARS-CoV-2","GAAGTATATAGCAAGC",1,2.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175L",1
"lib2","SARS-CoV-2","GAAGTATCATTCATCA",4,122.9,10.15,-0.69,0.06,2.75,1.02,0,">1 nonsynonymous","T3R F44Y C61W",3
"lib2","SARS-CoV-2","GAAGTATCCAATATGC",3,0,NA,NA,NA,NA,NA,NA,"stop","K87Q D97M L122*",3
"lib2","SARS-CoV-2","GAAGTATCCCAGTAAA",6,0,NA,NA,NA,NA,NA,NA,"stop","I28A Y39S C61S T85D I104M Y123M T201*",7
"lib2","SARS-CoV-2","GAAGTATCTAACCGAT",4,27.43,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E76F R127F Y159S",3
"lib2","SARS-CoV-2","GAAGTATGAAAAGAGT",2,44.91,10.19,-0.64,0.09,2.68,1.03,0,"1 nonsynonymous","F47K",1
"lib2","SARS-CoV-2","GAAGTATGCCCACAAC",7,87.67,10.83,-0.01,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTATGCTAACACG",3,19.45,8.25,-2.58,0.29,1.97,1.5,0.04,">1 nonsynonymous","G9Y G101D E141F P149I",4
"lib2","SARS-CoV-2","GAAGTATGCTCACAAG",4,85.84,8.47,-2.37,0.15,2.8,1.07,0.01,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","GAAGTATGTAGAATTT",2,40.38,10.64,-0.2,0.04,2.96,1.01,0,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","GAAGTATTAATGATCA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L Y91T C102V Y119I F126I E135V P149R",7
"lib2","SARS-CoV-2","GAAGTATTACTGAGAG",9,1.59,NA,NA,NA,NA,NA,NA,"stop","L5* V11I F70E Y119* L162Q",5
"lib2","SARS-CoV-2","GAAGTATTTCATGCAT",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44N K56M A89Y G152D Y159M",5
"lib2","SARS-CoV-2","GAAGTCAAAACCAATC",2,6.17,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E10F G83E N157I",3
"lib2","SARS-CoV-2","GAAGTCAAATTCATGT",1,10.36,10.67,-0.16,0.07,2.74,1.27,0,">1 nonsynonymous","V37R T140S K198V",3
"lib2","SARS-CoV-2","GAAGTCAAGAAATGAC",5,63.61,6.68,-4.16,0.38,1.5,1.22,0.02,">1 nonsynonymous","N30E C49W P54L R78L",4
"lib2","SARS-CoV-2","GAAGTCACGAACGGAT",1,8.24,10.74,-0.1,0.04,3,1.03,0,">1 nonsynonymous","C61D P149S T201S",3
"lib2","SARS-CoV-2","GAAGTCACGTCAAGAC",15,220.17,10.8,-0.04,0.04,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTCAGTGATATTA",6,128.3,10.76,-0.08,0.05,2.98,1.06,0,"1 nonsynonymous","G152A",1
"lib2","SARS-CoV-2","GAAGTCATAGCAACCA",4,32.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V F99Q S164I",3
"lib2","SARS-CoV-2","GAAGTCATATATATGT",2,28.97,10.81,-0.03,0.05,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GAAGTCCAAAACCAAT",3,23.73,10.9,0.06,0.19,2.61,1,0.02,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTCCCTATCATAA",2,24.61,10.89,0.06,0.06,2.9,1.08,0,"1 nonsynonymous","A18S",1
"lib2","SARS-CoV-2","GAAGTCCGAGGCCTCT",1,52.1,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F8I K48L S113E L125V",4
"lib2","SARS-CoV-2","GAAGTCCTCAAAACTG",19,206.29,9.14,-1.69,0.06,2.29,1.05,0,">1 nonsynonymous","F8M Y123N A192S",3
"lib2","SARS-CoV-2","GAAGTCGCCGCTAGAT",6,40.58,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V20W F99G Q144K",3
"lib2","SARS-CoV-2","GAAGTCGTTGCAAAAC",6,44.29,6.7,-4.14,0.42,1.5,1.14,0.03,">1 nonsynonymous","G86W N120I",2
"lib2","SARS-CoV-2","GAAGTCTACGCGAGGT",1,8.02,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","T100R P161L",2
"lib2","SARS-CoV-2","GAAGTCTATATCGTGC",3,52.21,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V115C C158A",2
"lib2","SARS-CoV-2","GAAGTCTATCATATAC",13,163.07,9.88,-0.96,0.04,2.09,1.08,0,">1 nonsynonymous","N1T L5W F62S N120R L162V",5
"lib2","SARS-CoV-2","GAAGTCTCAAGCTCGC",6,65.94,9.99,-0.85,0.06,2.89,1.05,0,">1 nonsynonymous","G155L A192R",2
"lib2","SARS-CoV-2","GAAGTCTCGAACGAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Q L122V V181L",3
"lib2","SARS-CoV-2","GAAGTCTTCTCTCATC",17,143.04,6.14,-4.69,0.81,1.5,1.25,0.02,">1 nonsynonymous","Y50D V65F I138L",3
"lib2","SARS-CoV-2","GAAGTCTTTAAAGAAT",2,19.62,8.88,-1.96,0.18,1.81,1.18,0.01,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","GAAGTGAACGAACAAC",3,36.1,10.8,-0.04,0.06,2.91,1.05,0,"1 nonsynonymous","A190V",1
"lib2","SARS-CoV-2","GAAGTGAAGACGAAAC",3,129.05,10.68,-0.16,0.03,2.93,1.09,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","GAAGTGAATTAATTTA",5,27.86,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F17T D68K F99V Y121F",4
"lib2","SARS-CoV-2","GAAGTGAGAGCTTAAA",5,114.55,10.71,-0.12,0.04,3,1,0,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","GAAGTGCAAACGATCG",2,10.18,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","F8Q C49R C61T S129G",4
"lib2","SARS-CoV-2","GAAGTGCACAAAAAAT",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114S L122T K128I",3
"lib2","SARS-CoV-2","GAAGTGCAGCTTATCG",3,78.77,6,-4.84,1.33,1.5,1.07,0,">1 nonsynonymous","F8K Y50I F99T S200V",4
"lib2","SARS-CoV-2","GAAGTGCCCAATAATT",10,41.7,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V20G V71H",2
"lib2","SARS-CoV-2","GAAGTGCCTAATCGCC",2,69.39,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F99T G155V N157Q",3
"lib2","SARS-CoV-2","GAAGTGGAGTGGACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35T S53* C61L F126L Y178V",5
"lib2","SARS-CoV-2","GAAGTGGCCTATAATA",11,0.55,NA,NA,NA,NA,NA,NA,"stop","A14H K56* D97P N107L",4
"lib2","SARS-CoV-2","GAAGTGGTGAAGAATG",15,92.6,7.35,-3.49,0.2,1.5,1.11,0.01,">1 nonsynonymous","I2A V37L G74A I138K T148N Q168L",6
"lib2","SARS-CoV-2","GAAGTGGTGGACGTAA",5,46.75,10.19,-0.65,0.05,2.83,1.03,0,"1 nonsynonymous","C31L",1
"lib2","SARS-CoV-2","GAAGTGGTGGTTAGCC",4,54.59,10.79,-0.04,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAAGTGTAAACCATCT",4,28.23,6.47,-4.37,0.38,1.5,1.23,0.03,"1 nonsynonymous","V180K",1
"lib2","SARS-CoV-2","GAAGTGTAACGAAGAA",4,56.26,10.85,0.02,0.06,2.94,1.08,0,"1 nonsynonymous","I28Y",1
"lib2","SARS-CoV-2","GAAGTGTTTAACAGCA",10,52.06,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A22R A67Y F99S",3
"lib2","SARS-CoV-2","GAAGTTAAAACGGTTG",3,36.13,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4F Y35P I88E K128A",4
"lib2","SARS-CoV-2","GAAGTTAACTGAACAG",4,78.82,10.86,0.02,0.04,2.94,1.07,0,">1 nonsynonymous","L5T L60M",2
"lib2","SARS-CoV-2","GAAGTTAAGGCAAATC",8,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A81V W106R Q144L",4
"lib2","SARS-CoV-2","GAAGTTACTTGGCACC",1,0.78,NA,NA,NA,NA,NA,NA,"stop","G9K I72R Q79* D97M",4
"lib2","SARS-CoV-2","GAAGTTAGAAAGTCAA",2,85.97,10.85,0.02,0.04,2.96,1.05,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","GAAGTTATAAGATCAG",1,17.75,10.75,-0.09,0.16,2.82,1.1,0.01,">1 nonsynonymous","G83N S164Q",2
"lib2","SARS-CoV-2","GAAGTTATATTAGATT",4,53.87,10.43,-0.41,0.07,2.93,1.05,0,">1 nonsynonymous","C6G S36E L122S",3
"lib2","SARS-CoV-2","GAAGTTCAAACCTAAG",11,212.42,8.56,-2.28,0.06,2.37,1.1,0,">1 nonsynonymous","S41E Q176C",2
"lib2","SARS-CoV-2","GAAGTTCAACGAATTC",5,74.21,10.82,-0.01,0.04,2.95,1.08,0,"1 nonsynonymous","N110D",1
"lib2","SARS-CoV-2","GAAGTTCACACGCCTT",1,8.91,10.14,-0.69,0.12,3,1.04,0.01,">1 nonsynonymous","Y39T K87S Y123W S164Q",4
"lib2","SARS-CoV-2","GAAGTTCCCTAACACT",11,55.03,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D59V V103Q L131R",3
"lib2","SARS-CoV-2","GAAGTTCGAAATGCCT",7,118.14,10.62,-0.21,0.09,2.88,1.08,0,"1 nonsynonymous","L188M",1
"lib2","SARS-CoV-2","GAAGTTCGCCAGTCCG",7,93.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8V V37C G86T P197Q",4
"lib2","SARS-CoV-2","GAAGTTCTACATCACC",5,86.26,10.93,0.09,0.07,2.97,1.03,0,"1 nonsynonymous","Y21F",1
"lib2","SARS-CoV-2","GAAGTTCTAGCAACCA",3,96.29,10.81,-0.02,0.06,2.96,1.06,0,">1 nonsynonymous","P149Q T201V",2
"lib2","SARS-CoV-2","GAAGTTCTCAAGAACC",5,73.64,10.18,-0.65,0.05,2.78,1.04,0,">1 nonsynonymous","G51C L187H P197W",3
"lib2","SARS-CoV-2","GAAGTTCTCTCAAGAA",7,39.45,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y93R F160G",2
"lib2","SARS-CoV-2","GAAGTTCTGGCCAATA",4,212.7,10.31,-0.52,0.03,2.88,1.03,0,">1 nonsynonymous","I80V P149C",2
"lib2","SARS-CoV-2","GAAGTTGACATGCGTG",1,12.48,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41G I88M Y119G Y165V",4
"lib2","SARS-CoV-2","GAAGTTGATATTAACA",1,40.8,6.44,-4.4,0.77,1.5,1.24,0.05,">1 nonsynonymous","D112S E141W",2
"lib2","SARS-CoV-2","GAAGTTGGACCAAACT",10,132.64,10.6,-0.24,0.03,2.96,1.05,0,">1 nonsynonymous","N4M E141K",2
"lib2","SARS-CoV-2","GAAGTTGGATAAGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y21W F99L V103R Y119* F156E S200C",6
"lib2","SARS-CoV-2","GAAGTTGGGCTTCGAA",6,9.09,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C6L F44Y S53F F99S G117S",5
"lib2","SARS-CoV-2","GAAGTTGGTAATTATG",3,67.56,9.21,-1.62,0.05,2.92,1.07,0,">1 nonsynonymous","S43F N157S",2
"lib2","SARS-CoV-2","GAAGTTGTAACTTGAA",10,85.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S113V S139L N157P",3
"lib2","SARS-CoV-2","GAAGTTGTAATGGCGA",1,12.01,10.88,0.04,0.12,2.85,1.16,0,">1 nonsynonymous","V37R C61R",2
"lib2","SARS-CoV-2","GAAGTTGTACAGAGGG",10,110.81,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T55H K94D S139V",3
"lib2","SARS-CoV-2","GAAGTTGTCGGGGCTT",15,215.12,6.24,-4.59,0.56,1.5,1.18,0.01,">1 nonsynonymous","Y21L I28M L162Y Y178Q",4
"lib2","SARS-CoV-2","GAAGTTTCCTAATAAA",3,56.9,10.49,-0.35,0.04,2.89,1.09,0,"1 nonsynonymous","G166N",1
"lib2","SARS-CoV-2","GAAGTTTCGTAAATTT",5,37.58,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S19W N120I",2
"lib2","SARS-CoV-2","GAAGTTTGAACGCCCA",2,71.19,9.97,-0.86,0.09,2.36,1.11,0,">1 nonsynonymous","K56E Y123G",2
"lib2","SARS-CoV-2","GAAGTTTGATGGAAAA",7,57.22,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2S A33E V77L G86F",4
"lib2","SARS-CoV-2","GAAGTTTTCCGGTCAC",5,105.98,9.02,-1.82,0.07,1.59,1.09,0,">1 nonsynonymous","D90Y D97E G152L",3
"lib2","SARS-CoV-2","GAAGTTTTGCGCTCCC",3,34.75,10.14,-0.69,0.04,3,1.05,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","GAATAAAAACCATCAC",3,28.69,6.17,-4.67,0.63,3,1.17,0.01,">1 nonsynonymous","S147C L162K",2
"lib2","SARS-CoV-2","GAATAAAACAAAACAG",3,18.73,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","S45Y D75T I80K V153A",4
"lib2","SARS-CoV-2","GAATAAAACCTACTCG",2,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V S41M K87E",3
"lib2","SARS-CoV-2","GAATAAAACTTCACGC",5,15.98,10.78,-0.06,0.05,3,1.02,0,">1 nonsynonymous","R16S F62T Q144A",3
"lib2","SARS-CoV-2","GAATAAAAGTACGCTG",2,12.42,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Y35S N110V E135R E141T C150D",5
"lib2","SARS-CoV-2","GAATAAAAGTCAAAGA",1,22.72,6.46,-4.38,0.59,2.02,1.16,0.04,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","GAATAAAATATGCCTA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S E141D",2
"lib2","SARS-CoV-2","GAATAAACGCACCATG",5,7.14,10.08,-0.75,0.09,2.89,1.05,0,">1 nonsynonymous","L122G T148A",2
"lib2","SARS-CoV-2","GAATAAACTCAAAGTC",1,36.79,10.63,-0.21,0.06,2.84,1.17,0,">1 nonsynonymous","K132S F160H",2
"lib2","SARS-CoV-2","GAATAAACTCACACAG",10,65.17,6.94,-3.9,0.37,1.5,1.12,0.03,">1 nonsynonymous","C6V Y93T I104L",3
"lib2","SARS-CoV-2","GAATAAACTCATTCCG",10,70.57,9.79,-1.04,0.1,2.11,1.01,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","GAATAAACTCTACACT",26,223.51,10.73,-0.11,0.03,2.96,1.06,0,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","GAATAAAGGGTCAATG",3,68.74,9.85,-0.99,0.1,2.29,1,0,">1 nonsynonymous","F12Y P149A",2
"lib2","SARS-CoV-2","GAATAAATAAATACAC",3,95.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39W Y50L G83L V173T",4
"lib2","SARS-CoV-2","GAATAAATAATACAAT",11,75.62,10.82,-0.02,0.06,3,1.03,0,">1 nonsynonymous","S43H S147L",2
"lib2","SARS-CoV-2","GAATAAATCATTATTA",6,76.7,10.64,-0.2,0.05,2.9,1.1,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","GAATAAATGGAAGGAA",7,115.31,9.91,-0.92,0.07,2.22,1.01,0,">1 nonsynonymous","K26E A81T",2
"lib2","SARS-CoV-2","GAATAAATGTAAAAAG",1,14.94,7.77,-3.06,0.35,1.5,1.02,0.06,">1 nonsynonymous","S69V R136I",2
"lib2","SARS-CoV-2","GAATAAATTCGGAGTT",1,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N S113L",2
"lib2","SARS-CoV-2","GAATAAATTCTCACGT",11,176.73,10.74,-0.09,0.04,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATAACAATTGTTAA",4,58.13,9.33,-1.51,0.09,1.8,1.09,0,">1 nonsynonymous","V11S A33R K48E",3
"lib2","SARS-CoV-2","GAATAACACAAAGTGA",3,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49E T63D G86H K114M A190Y",5
"lib2","SARS-CoV-2","GAATAACACACACTAG",8,170.96,8.16,-2.68,0.11,2.48,1.03,0,">1 nonsynonymous","F126N S139G P149N F156L",4
"lib2","SARS-CoV-2","GAATAACATAATGTGG",1,11.46,8.32,-2.51,0.24,2.75,1.07,0.02,">1 nonsynonymous","G117C F156S",2
"lib2","SARS-CoV-2","GAATAACATTACCCTT",8,96.31,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A81V G101M L122A T148I",4
"lib2","SARS-CoV-2","GAATAACCCAAGTTAC",3,25.58,6.42,-4.41,0.4,1.63,1.23,0.02,">1 nonsynonymous","G86L L95P",2
"lib2","SARS-CoV-2","GAATAACCTGAGCAAA",4,36.46,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I28L F44Q P82V N107C S129G",5
"lib2","SARS-CoV-2","GAATAACGAAATGACA",3,81.58,10.82,-0.02,0.04,2.94,1.06,0,">1 nonsynonymous","A192Y T201M",2
"lib2","SARS-CoV-2","GAATAACGAGAGATCT",3,18.75,6,-4.84,0.83,3,1.11,0.01,">1 nonsynonymous","I88R D97P W106V Y119M L162D",5
"lib2","SARS-CoV-2","GAATAACTACGAAATC",3,28.63,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91V F99P",2
"lib2","SARS-CoV-2","GAATAACTCACAATCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L Q84N Y91T N118H",4
"lib2","SARS-CoV-2","GAATAACTTATAAACC",2,35.24,8.52,-2.32,0.33,1.5,1.13,0.05,">1 nonsynonymous","Y91S G166T V173A",3
"lib2","SARS-CoV-2","GAATAACTTCCGCGAA",7,145.55,10.39,-0.45,0.03,2.92,1.02,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","GAATAAGAAAAGGGTG",6,64.82,10.68,-0.16,0.03,2.94,1.05,0,">1 nonsynonymous","S36L K128A",2
"lib2","SARS-CoV-2","GAATAAGAAATCTACT",9,162.29,10.84,0,0.04,2.9,1.08,0,">1 nonsynonymous","V37R T55K",2
"lib2","SARS-CoV-2","GAATAAGAACTAAGGC",3,12.1,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N1R T63P Y123I N130H V153L N157M T201I",7
"lib2","SARS-CoV-2","GAATAAGACAAAAATC",1,30.83,10.83,-0.01,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATAAGACGAGACTA",7,112.3,10.52,-0.31,0.04,2.94,1.06,0,">1 nonsynonymous","C61L V115N",2
"lib2","SARS-CoV-2","GAATAAGAGAAAGCCA",11,58.41,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F8E P82M V115W N151Q T201S",5
"lib2","SARS-CoV-2","GAATAAGCACGGACAA",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N107S Q144* V153S",3
"lib2","SARS-CoV-2","GAATAAGCCAACGTAA",3,5.79,NA,NA,NA,NA,NA,NA,"stop","A22E K48I S113M Q168*",4
"lib2","SARS-CoV-2","GAATAAGCGGGCCCTA",6,110.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D97Y G146E C150Y",3
"lib2","SARS-CoV-2","GAATAAGCTCGACCGA",8,96.08,10.65,-0.19,0.03,2.91,1.03,0,"1 nonsynonymous","P96A",1
"lib2","SARS-CoV-2","GAATAAGCTTCACTGA",4,118.22,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N92T P177L K198Q",3
"lib2","SARS-CoV-2","GAATAAGGACTGTGGA",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R N13R V52T Y91P",4
"lib2","SARS-CoV-2","GAATAAGGGTACAAAA",12,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L L60F V77L A81R V181A L183S",6
"lib2","SARS-CoV-2","GAATAAGTCAATTGTC",1,5.53,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D98Y G155I P161M",3
"lib2","SARS-CoV-2","GAATAAGTGAAATAAG",6,138.76,9.14,-1.69,0.05,2.91,1.09,0,">1 nonsynonymous","A42R G174I",2
"lib2","SARS-CoV-2","GAATAATAAACCAATA",8,79.54,9.98,-0.86,0.31,1.5,1,0.05,">1 nonsynonymous","L60K G86M P96K G146A",4
"lib2","SARS-CoV-2","GAATAATAAACCATTG",3,26.97,10.23,-0.61,0.1,2.86,1.06,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","GAATAATAAACTTCCA",6,19.8,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","I72T Y93T Y121L G155S",4
"lib2","SARS-CoV-2","GAATAATACACTGTAA",3,14.47,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","I88E K94R R127L A190V",4
"lib2","SARS-CoV-2","GAATAATAGTCATAAA",6,13.84,6,-4.84,2,3,1.08,0,">1 nonsynonymous","Y91R L95P",2
"lib2","SARS-CoV-2","GAATAATATTCGACTA",2,5.75,6.91,-3.93,0.44,1.5,1,0.01,">1 nonsynonymous","R27V F99Y P161G Y178N",4
"lib2","SARS-CoV-2","GAATAATCCCTGATTT",6,0.16,NA,NA,NA,NA,NA,NA,"stop","C31K F99* Y121R",3
"lib2","SARS-CoV-2","GAATAATCCGTCAAAG",23,355.51,8.4,-2.44,0.11,1.78,1.12,0,">1 nonsynonymous","N30T S41C P133S G174L",4
"lib2","SARS-CoV-2","GAATAATCTAAGGCTT",2,4.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAATAATCTTCATTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","V103* K114F",2
"lib2","SARS-CoV-2","GAATAATGAAGTAAAA",4,35.27,9.81,-1.02,0.08,2.37,1.06,0,">1 nonsynonymous","P7F G83C P149L",3
"lib2","SARS-CoV-2","GAATAATGACATTGTT",5,57.58,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S41M T63R N92L",3
"lib2","SARS-CoV-2","GAATAATGAGCAACTT",12,60.45,7.14,-3.69,0.33,1.5,1.07,0.03,">1 nonsynonymous","R16S G74A K128W P133Y T201K",5
"lib2","SARS-CoV-2","GAATAATGGATCCACC",2,20.3,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A105F C150S Y165V",3
"lib2","SARS-CoV-2","GAATAATGTCTATCCG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","S45* I88L S113A",3
"lib2","SARS-CoV-2","GAATAATTCACGAGCA",3,62.77,10.77,-0.07,0.08,2.85,1.13,0,">1 nonsynonymous","P7H N120E",2
"lib2","SARS-CoV-2","GAATAATTGATTGTAG",1,9.22,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V20M P169L",2
"lib2","SARS-CoV-2","GAATACAAACCCTCGT",5,38.22,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","K94Y A105S Y165R",3
"lib2","SARS-CoV-2","GAATACAAATCATAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T15* I138S V153A P177I",4
"lib2","SARS-CoV-2","GAATACAAATTCCCAT",2,50.5,10.85,0.01,0.05,2.93,1.08,0,"1 nonsynonymous","T3H",1
"lib2","SARS-CoV-2","GAATACAAATTTCATG",3,30.77,9.75,-1.08,0.08,2.8,1.09,0,"1 nonsynonymous","G74K",1
"lib2","SARS-CoV-2","GAATACAACCCACCTC",2,3.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S G86L",2
"lib2","SARS-CoV-2","GAATACAAGTAAAAAA",8,45.64,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P82V G117T L183T",3
"lib2","SARS-CoV-2","GAATACAATGACTAAA",5,9.51,NA,NA,NA,NA,NA,NA,"stop","K26S G86L N107W Y143*",4
"lib2","SARS-CoV-2","GAATACAATGAGGAAC",3,41.14,7.91,-2.92,0.15,2.36,1.07,0.01,">1 nonsynonymous","N13F G117D",2
"lib2","SARS-CoV-2","GAATACAATTCTAGCT",2,71.23,10.92,0.08,0.05,2.99,1,0,"synonymous","",0
"lib2","SARS-CoV-2","GAATACACATATTCAA",2,34.68,9.78,-1.05,0.09,1.93,1,0,">1 nonsynonymous","S43A D59R E76G",3
"lib2","SARS-CoV-2","GAATACACCAACCAGT",5,25.74,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N40W Q84P F99C Y119E I142S",5
"lib2","SARS-CoV-2","GAATACACTAAAGTTG",4,92.9,6.99,-3.85,0.31,1.5,1.1,0.02,">1 nonsynonymous","T63V Y178D",2
"lib2","SARS-CoV-2","GAATACACTAGCCGGA",6,56.67,9.1,-1.74,0.14,1.92,1.07,0.01,"1 nonsynonymous","F17E",1
"lib2","SARS-CoV-2","GAATACAGAGCCAGCA",1,10.66,9.84,-0.99,0.07,2.81,1.17,0,">1 nonsynonymous","F44N E154R",2
"lib2","SARS-CoV-2","GAATACATAACTTCGG",5,89.33,10.86,0.03,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATACATCGTTATCA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65A D98T R127G P197Q",4
"lib2","SARS-CoV-2","GAATACATTTAAGAAG",2,10.55,6,-4.84,1.41,1.5,1.11,0.04,">1 nonsynonymous","C49A D98E",2
"lib2","SARS-CoV-2","GAATACATTTCCTAAC",18,259.95,9.56,-1.27,0.08,2.5,1.05,0,">1 nonsynonymous","A81L K87M",2
"lib2","SARS-CoV-2","GAATACCAACATACAA",2,26.63,10.71,-0.12,0.06,2.99,1,0,">1 nonsynonymous","R27N D90S",2
"lib2","SARS-CoV-2","GAATACCATCTATCGT",2,36.21,10.9,0.06,0.05,2.96,1.06,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","GAATACCATGAACATT",7,3.19,NA,NA,NA,NA,NA,NA,"stop","G9* L187G",2
"lib2","SARS-CoV-2","GAATACCCAATTCACC",14,222.82,9.21,-1.62,0.11,1.66,1.09,0,">1 nonsynonymous","N107T Y123K K128L",3
"lib2","SARS-CoV-2","GAATACCCCGTGCCTA",4,28.54,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V103K N120I G152S Q176M",4
"lib2","SARS-CoV-2","GAATACCGGGATTCAG",2,2.32,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib2","SARS-CoV-2","GAATACCTAACCCATG",5,72.37,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61V S139R C150I T201S",4
"lib2","SARS-CoV-2","GAATACCTAACGGCAC",4,103.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4S S41T F62M G101C S147C",5
"lib2","SARS-CoV-2","GAATACCTGTAAACGA",18,150.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68L G83T I88T L95M L122C",5
"lib2","SARS-CoV-2","GAATACCTGTCGCCGG",7,102.8,10.23,-0.6,0.02,2.89,1.08,0,">1 nonsynonymous","N30K G116S",2
"lib2","SARS-CoV-2","GAATACGACAGAAAAC",3,32.97,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","C6S D68V D97L",3
"lib2","SARS-CoV-2","GAATACGACGACCTAG",7,25.5,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","N58S P96G I142A P177N",4
"lib2","SARS-CoV-2","GAATACGAGAGAGGCG",1,17.7,6,-4.84,2,1.5,1.08,0.01,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","GAATACGATGTTCGAT",13,70.41,8.04,-2.79,0.25,1.5,1.2,0.02,">1 nonsynonymous","R25M N109V",2
"lib2","SARS-CoV-2","GAATACGCAGATATCG",3,69.99,9.35,-1.49,0.11,2.38,1.13,0,">1 nonsynonymous","A42S G51Y F126H Q163A",4
"lib2","SARS-CoV-2","GAATACGCCTAAAGTG",16,251.76,10.28,-0.55,0.02,2.92,1.05,0,">1 nonsynonymous","Y35E C61T",2
"lib2","SARS-CoV-2","GAATACGCGTAAGATC",8,21.86,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C49L L57T I80F W106Y",4
"lib2","SARS-CoV-2","GAATACGGCGAAGATT",3,1.53,NA,NA,NA,NA,NA,NA,"stop","Q79* L131V",2
"lib2","SARS-CoV-2","GAATACGTCTTTAAAA",12,172.42,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V103L F134R Y143S F167Y",4
"lib2","SARS-CoV-2","GAATACGTGAGACTCC",2,1.11,NA,NA,NA,NA,NA,NA,"stop","K114S Y121* P177A A190T K199L",5
"lib2","SARS-CoV-2","GAATACGTGGAAAATA",6,41.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V71Q N92L G101F N118Y",4
"lib2","SARS-CoV-2","GAATACTAACGGATAT",13,102.22,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","GAATACTAACTAACCA",2,11.79,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G9S G86F D98A W106Y",4
"lib2","SARS-CoV-2","GAATACTATGAACCGC",1,25.08,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S29R A105W S113L",3
"lib2","SARS-CoV-2","GAATACTCCTCTAAAT",1,17.94,6.01,-4.83,1.69,1.5,1.28,0.04,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","GAATACTCGGCTACTA",9,67.37,9.4,-1.43,0.11,1.93,1.19,0,">1 nonsynonymous","T55E A81S V181L",3
"lib2","SARS-CoV-2","GAATACTTATTATACG",2,1.2,NA,NA,NA,NA,NA,NA,"stop","R16P L95Q A105* P149I",4
"lib2","SARS-CoV-2","GAATAGAAACAAGCGA",3,55.44,6.05,-4.78,0.99,1.5,1.21,0.02,">1 nonsynonymous","G117F F167I",2
"lib2","SARS-CoV-2","GAATAGAAACCGCTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","C6Q L57I T63Y F134* F156S",5
"lib2","SARS-CoV-2","GAATAGAATCTGGACC",6,61.46,8.64,-2.19,0.08,3,1.04,0,">1 nonsynonymous","Y39L N118E G174I",3
"lib2","SARS-CoV-2","GAATAGACACTATTAT",3,22.06,10.63,-0.2,0.06,2.94,1.07,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","GAATAGACATCACTGA",4,19.14,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S41R P82C A105V G155N K198L",5
"lib2","SARS-CoV-2","GAATAGACTACGTTAC",2,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23D D68W Y91S I142Y T201Q",5
"lib2","SARS-CoV-2","GAATAGAGGTACAAAC",5,19.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18L T85C N92R",3
"lib2","SARS-CoV-2","GAATAGATATTTAATA",5,111.2,6,-4.84,1.41,1.5,1.16,0,">1 nonsynonymous","S36C G101V Y175A T201M",4
"lib2","SARS-CoV-2","GAATAGATGCGATGCC",11,110.16,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P82S P161Q P197D",3
"lib2","SARS-CoV-2","GAATAGATTTTACGTT",8,111.45,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R25L Y35H A81T V103L G152L K198M",6
"lib2","SARS-CoV-2","GAATAGCAAAAAAACT",5,31.11,10.55,-0.29,0.08,2.89,1.1,0,">1 nonsynonymous","E10V I28L T85R N120Q F160N",5
"lib2","SARS-CoV-2","GAATAGCAAAATCTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143* Q176G",2
"lib2","SARS-CoV-2","GAATAGCAATGACAAG",9,36.71,9.92,-0.92,0.1,2.04,1.07,0,">1 nonsynonymous","A14R D34I",2
"lib2","SARS-CoV-2","GAATAGCAGTCCCAAT",3,55.8,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42T F70R Y121L",3
"lib2","SARS-CoV-2","GAATAGCCTCTGACTT",3,9.89,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D98Y L162E",2
"lib2","SARS-CoV-2","GAATAGCGACCACTTA",1,0.06,NA,NA,NA,NA,NA,NA,"stop","Y175*",1
"lib2","SARS-CoV-2","GAATAGCGGTAATACT",9,91.27,10.63,-0.21,0.06,2.9,1.09,0,">1 nonsynonymous","L5N Y21H N120D",3
"lib2","SARS-CoV-2","GAATAGCTAAAGATAT",13,56.3,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I104N N110T T170L",3
"lib2","SARS-CoV-2","GAATAGCTACAAATCC",1,4.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50F",1
"lib2","SARS-CoV-2","GAATAGCTCTATTCCG",5,9.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182E",1
"lib2","SARS-CoV-2","GAATAGGAAAACCAGA",2,21.33,9.38,-1.45,0.13,2.19,1.06,0.01,">1 nonsynonymous","T63W D90W",2
"lib2","SARS-CoV-2","GAATAGGATAAACTAA",6,72.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36N Y50N F99Q Q163M",4
"lib2","SARS-CoV-2","GAATAGGCGAGACCTA",5,0.05,NA,NA,NA,NA,NA,NA,"stop","N13H N24S D112* F167*",4
"lib2","SARS-CoV-2","GAATAGGGCTACCCTG",11,91.22,10.4,-0.43,0.06,2.93,1.07,0,">1 nonsynonymous","I2V A42D K48L G116M P197T",5
"lib2","SARS-CoV-2","GAATAGGGTAACTCAA",7,79.44,9.86,-0.97,0.05,2.85,1.04,0,">1 nonsynonymous","S36Y F156M",2
"lib2","SARS-CoV-2","GAATAGGTATGACGTA",1,0.44,NA,NA,NA,NA,NA,NA,"stop","N1* C6A D97S T100S L122E Q144H",6
"lib2","SARS-CoV-2","GAATAGGTCGACCTGA",2,70.98,10,-0.84,0.08,2.38,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","GAATAGGTGCGAAGCC",5,0.53,NA,NA,NA,NA,NA,NA,"stop","V37L P82* L188P",3
"lib2","SARS-CoV-2","GAATAGGTGGCACCGG",7,64.52,10.7,-0.13,0.07,2.93,1.1,0,"1 nonsynonymous","P133A",1
"lib2","SARS-CoV-2","GAATAGGTTAAAAGCT",6,2.3,NA,NA,NA,NA,NA,NA,"stop","L38* E141V N157F",3
"lib2","SARS-CoV-2","GAATAGGTTTAAGAAA",6,31.06,6.13,-4.71,0.79,1.5,1.13,0.02,">1 nonsynonymous","L95D G101H",2
"lib2","SARS-CoV-2","GAATAGTAAGAGCTCC",3,30.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46N L95Q",2
"lib2","SARS-CoV-2","GAATAGTAATATATAT",7,93.01,10.33,-0.5,0.06,2.66,1.02,0,">1 nonsynonymous","F62S Y123L",2
"lib2","SARS-CoV-2","GAATAGTAGTGTGAAT",2,53.63,10.8,-0.04,0.07,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATAGTCATAAAGTC",2,9.82,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A67L Q84K G86K G196R",4
"lib2","SARS-CoV-2","GAATAGTGGTCATCGC",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S G74C A81S N120L S200G",5
"lib2","SARS-CoV-2","GAATATAAATATCTAA",5,11.36,NA,NA,NA,NA,NA,NA,"stop","F44R N92R G155M Y159*",4
"lib2","SARS-CoV-2","GAATATAACATATCGT",7,162.75,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","N4I F44T G51A Y143G",4
"lib2","SARS-CoV-2","GAATATAAGCCAAAAT",3,29.76,7.92,-2.92,0.44,1.5,1,0.08,">1 nonsynonymous","R16N D34E S53H D112Q E186R",5
"lib2","SARS-CoV-2","GAATATAATAATAATA",2,16.7,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D112L G152T C158H",3
"lib2","SARS-CoV-2","GAATATAATGTGGAAA",3,71.23,10.87,0.04,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATATACAAAAATTG",3,13.64,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23V F44Q",2
"lib2","SARS-CoV-2","GAATATACCACTAAGG",1,12.19,7.37,-3.46,0.33,1.5,1.18,0.04,">1 nonsynonymous","G51T I142Y G155I N171T",4
"lib2","SARS-CoV-2","GAATATACCATAACGA",1,12.04,10.72,-0.12,0.06,3,1.02,0,">1 nonsynonymous","T85A D98R L122R",3
"lib2","SARS-CoV-2","GAATATACCTAATTCT",8,35.51,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9L S36K T148V V180H",4
"lib2","SARS-CoV-2","GAATATACCTTTCTCA",5,114.34,10.44,-0.4,0.04,2.84,1.07,0,">1 nonsynonymous","R16L F62I L95V",3
"lib2","SARS-CoV-2","GAATATACGAATTCCT",12,7.89,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N13W S41T K87G V103D",4
"lib2","SARS-CoV-2","GAATATACGCACATAG",5,60.44,7.93,-2.91,0.22,1.5,1.12,0.02,">1 nonsynonymous","P54W V77G",2
"lib2","SARS-CoV-2","GAATATAGCCTGTACA",1,58.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36I D59Q I88T K94V",4
"lib2","SARS-CoV-2","GAATATAGCGGGATCC",11,268.42,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7V Y50M F62G D97R Q176T",5
"lib2","SARS-CoV-2","GAATATAGCGTATGGA",2,109.72,10.38,-0.45,0.04,2.87,1.13,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","GAATATAGCGTTACAT",3,0.93,NA,NA,NA,NA,NA,NA,"stop","N4* P96R P169I A190N",4
"lib2","SARS-CoV-2","GAATATAGTGACACAC",2,23.97,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Q84H L95M F99E Q176T L188G",5
"lib2","SARS-CoV-2","GAATATATAAAGGATC",13,4.9,NA,NA,NA,NA,NA,NA,"stop","R27*",1
"lib2","SARS-CoV-2","GAATATATAAGACATC",1,55.47,10.98,0.14,0.05,2.99,1.02,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","GAATATATACACATAA",12,10.11,NA,NA,NA,NA,NA,NA,"stop","E10M K26* A42H N157Y S184D T201W",6
"lib2","SARS-CoV-2","GAATATATACGCAAAT",1,13.34,10.7,-0.14,0.11,2.95,1.12,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","GAATATATACTACCCA",3,31.93,8.71,-2.13,0.27,1.5,1.08,0.03,">1 nonsynonymous","K26L P82M",2
"lib2","SARS-CoV-2","GAATATATACTGGTGA",2,10.66,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9R K56Q D112Q",3
"lib2","SARS-CoV-2","GAATATATCGAACGAC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N13* G116T Y175F",3
"lib2","SARS-CoV-2","GAATATCAATGGATAT",4,3.88,NA,NA,NA,NA,NA,NA,"stop","R27K F44M V103* R127E",4
"lib2","SARS-CoV-2","GAATATCAGAAGGAAC",2,18.16,8.93,-1.9,0.14,1.66,1.07,0.01,">1 nonsynonymous","S53Y A81Y",2
"lib2","SARS-CoV-2","GAATATCCACAAGCCA",3,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W S43R F99G L183R",4
"lib2","SARS-CoV-2","GAATATCCATTGAAAA",1,14.02,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6A S41G F47V V65H R127P E135G",6
"lib2","SARS-CoV-2","GAATATCCCTAAGTGG",1,41.74,10.71,-0.12,0.07,2.9,1.05,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","GAATATCCTAGTTGCG",9,121.74,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G74V T148A G155H L162S",4
"lib2","SARS-CoV-2","GAATATCTTTTCGCAA",2,21.06,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V71Y",1
"lib2","SARS-CoV-2","GAATATGAATACTAAA",5,71.27,8.24,-2.6,0.31,1.5,1.07,0.04,">1 nonsynonymous","I2K P82D K198E",3
"lib2","SARS-CoV-2","GAATATGACCTTTCTT",3,18.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S45L D90S A105T Y159D",4
"lib2","SARS-CoV-2","GAATATGACGAGCACA",5,31.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49N",1
"lib2","SARS-CoV-2","GAATATGATTACTCTC",7,95.41,6,-4.84,0.92,1.62,1.14,0,">1 nonsynonymous","S43E P177K",2
"lib2","SARS-CoV-2","GAATATGCTATCCATA",2,12.85,6,-4.84,2,3,1.01,0,">1 nonsynonymous","K94E D112N",2
"lib2","SARS-CoV-2","GAATATGGCGACAGCC",5,34.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34C V52M G146S F167S",4
"lib2","SARS-CoV-2","GAATATGGCTTGGGAA",2,27.14,9.46,-1.37,0.11,1.8,1.12,0.01,">1 nonsynonymous","N40T W106L",2
"lib2","SARS-CoV-2","GAATATGGGCGCCGGA",3,33.95,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N4V V11R D98S N151T",4
"lib2","SARS-CoV-2","GAATATGGTGGCGTAA",2,17.03,7.21,-3.63,0.24,1.5,1.11,0.03,">1 nonsynonymous","A33M F134C A145R N151T",4
"lib2","SARS-CoV-2","GAATATGGTTCTTTAG",3,29.44,10.72,-0.12,0.03,2.99,1,0,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","GAATATGTGGTGATAT",1,10.74,9.36,-1.47,0.22,1.64,1.3,0.02,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","GAATATGTTGGCCCCT",5,238.18,9.51,-1.33,0.04,2.72,1.07,0,">1 nonsynonymous","N40A Q176H",2
"lib2","SARS-CoV-2","GAATATGTTGTTTTAG",5,18.69,7.39,-3.44,0.2,1.73,1.16,0.01,">1 nonsynonymous","R27S Y66K Y143H Y175F V181L P197T",6
"lib2","SARS-CoV-2","GAATATTAAAGGGAAG",6,80.79,10.1,-0.74,0.05,2.82,1.05,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","GAATATTAATACCTAA",1,39.22,8.53,-2.31,0.15,2.03,1.01,0.01,">1 nonsynonymous","F167M T201I",2
"lib2","SARS-CoV-2","GAATATTACAACTAAA",2,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y N13V A81K D90Y I104L Y119G C158P",7
"lib2","SARS-CoV-2","GAATATTACAAGGTAA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","K26* N64Y S113L S147T S184A",5
"lib2","SARS-CoV-2","GAATATTACTATATGC",7,20.9,6,-4.84,2,3,1.25,0.03,">1 nonsynonymous","D34G K87L T100P Y119W N171Y G174M",6
"lib2","SARS-CoV-2","GAATATTATCATTAGA",10,75.43,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K26W D68L K87H A192Y",4
"lib2","SARS-CoV-2","GAATATTATCGTTTCG",3,30.24,10.22,-0.62,0.05,2.94,1.04,0,">1 nonsynonymous","P7A C31R",2
"lib2","SARS-CoV-2","GAATATTATTCCACTA",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R K128L E141L V173G",4
"lib2","SARS-CoV-2","GAATATTTCCGTTACT",10,132.61,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4A G86T Y93L V194D T201G",5
"lib2","SARS-CoV-2","GAATATTTTAAAGTTA",7,93,10.23,-0.61,0.03,2.92,1.05,0,">1 nonsynonymous","R27K C61M D90Y",3
"lib2","SARS-CoV-2","GAATATTTTACGAATA",2,50.1,10.62,-0.22,0.04,2.94,1.03,0,">1 nonsynonymous","V37I L57F",2
"lib2","SARS-CoV-2","GAATCAAAAACCGATA",1,37.52,10.18,-0.66,0.06,2.97,1,0,">1 nonsynonymous","I2M Y35Q",2
"lib2","SARS-CoV-2","GAATCAAAAAGTTCGA",4,57.13,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N64Y E141M F167V",3
"lib2","SARS-CoV-2","GAATCAAAAATAAGCT",1,9.89,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I2R K56R D98G C150F",4
"lib2","SARS-CoV-2","GAATCAAAAGTTAAAC",1,68.71,10.86,0.03,0.06,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GAATCAAAATGAGGCT",1,16.88,10.41,-0.43,0.08,2.91,1.1,0,">1 nonsynonymous","D75N L111I F134M",3
"lib2","SARS-CoV-2","GAATCAAAATTTTTTT",1,61.14,10.29,-0.55,0.05,2.85,1.08,0,">1 nonsynonymous","G83C D98T K128T V153I L188H",5
"lib2","SARS-CoV-2","GAATCAAACAGCAAAC",4,59.4,10.58,-0.25,0.06,2.87,1.12,0,">1 nonsynonymous","T3R S29V",2
"lib2","SARS-CoV-2","GAATCAAACCAAATGT",10,41.88,8.19,-2.65,0.24,1.5,1.04,0.03,">1 nonsynonymous","N64G D90Y W106R N120E F160S",5
"lib2","SARS-CoV-2","GAATCAAAGTTCCTGC",11,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S N58L G83V Q163P A192T",5
"lib2","SARS-CoV-2","GAATCAAATAATTCTG",2,31.29,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T85D R136G V181G",3
"lib2","SARS-CoV-2","GAATCAAATGACGTAA",26,3,NA,NA,NA,NA,NA,NA,"stop","G9* R73G",2
"lib2","SARS-CoV-2","GAATCAAATGTGAGCA",6,79.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6V D97M Y143T G155T",4
"lib2","SARS-CoV-2","GAATCAACAGCAACCC",6,30.18,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S45F P82F",2
"lib2","SARS-CoV-2","GAATCAACGAAACTGC",3,14.16,9.66,-1.18,0.14,2.48,1.02,0.01,">1 nonsynonymous","N64A W106V",2
"lib2","SARS-CoV-2","GAATCAAGAGTTTTGT",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P F99K I138N L188M",4
"lib2","SARS-CoV-2","GAATCAATAGGTAGTG",2,7.83,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","Q79R Y121V S129I R136N S139I",5
"lib2","SARS-CoV-2","GAATCAATCAAAAGAT",2,4.94,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAATCAATTTAACCAT",12,126.77,9.9,-0.94,0.06,2.28,1.09,0,">1 nonsynonymous","R127K P149Y",2
"lib2","SARS-CoV-2","GAATCACAACGACTTT",1,9.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L G83I T140D Y165Q",4
"lib2","SARS-CoV-2","GAATCACACAGTAGAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91D P96S P177T A192G",4
"lib2","SARS-CoV-2","GAATCACAGCAAAAGT",3,54.95,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","S43D Q84Y D90S L162Q",4
"lib2","SARS-CoV-2","GAATCACGCGAAGTCG",2,18.12,9.87,-0.97,0.09,2.06,1,0,">1 nonsynonymous","T15F N58A P96A P197M",4
"lib2","SARS-CoV-2","GAATCACGTTATTGAG",2,66.67,10.36,-0.48,0.08,2.65,1.11,0,">1 nonsynonymous","D97W I138F Y175W",3
"lib2","SARS-CoV-2","GAATCACTAACCAGGG",3,13.8,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L38H T63I F99K A105S K114E G116E",6
"lib2","SARS-CoV-2","GAATCACTACATTAAG",21,219.13,10.23,-0.61,0.07,2.67,1.06,0,">1 nonsynonymous","V65Y Q163G",2
"lib2","SARS-CoV-2","GAATCACTATACTACT",6,3.42,NA,NA,NA,NA,NA,NA,"stop","F12I A33W D90H V103*",4
"lib2","SARS-CoV-2","GAATCAGACATCCTAA",11,2.99,NA,NA,NA,NA,NA,NA,"stop","Y119* E135M",2
"lib2","SARS-CoV-2","GAATCAGAGATAACTG",6,47.28,9.66,-1.17,0.09,2.52,1.04,0,">1 nonsynonymous","A105M P149V",2
"lib2","SARS-CoV-2","GAATCAGAGCCTCCAA",13,138.15,9.62,-1.22,0.02,2.06,1.05,0,"1 nonsynonymous","V77F",1
"lib2","SARS-CoV-2","GAATCAGGGGCTCCAA",8,1.88,NA,NA,NA,NA,NA,NA,"stop","A14L S41* L95Y L187M",4
"lib2","SARS-CoV-2","GAATCAGGTAAGACGA",2,16.76,8.48,-2.36,0.36,1.5,1.04,0.03,">1 nonsynonymous","L5H D34P S43D C61S E76S",5
"lib2","SARS-CoV-2","GAATCAGTTCAATGTT",3,25.87,6,-4.84,0.82,3,1.11,0.01,">1 nonsynonymous","S41R C49L P96R Y123H I138F",5
"lib2","SARS-CoV-2","GAATCAGTTGACTGGA",13,183.56,10.47,-0.37,0.04,2.88,1.04,0,">1 nonsynonymous","T55Q K94N V115K",3
"lib2","SARS-CoV-2","GAATCATACCGTACTA",1,8.16,10.28,-0.56,0.08,2.96,1,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","GAATCATATGAAGCAT",4,17.7,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23L K94L",2
"lib2","SARS-CoV-2","GAATCATCAACACTAA",17,6.16,NA,NA,NA,NA,NA,NA,"stop","Y91P D97I D112* Y159N",4
"lib2","SARS-CoV-2","GAATCATCACGTACCA",2,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S N157L",2
"lib2","SARS-CoV-2","GAATCATCCAGTCTAC",9,263.73,10.7,-0.13,0.02,2.93,1.04,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","GAATCATCTTATGAAA",2,11.53,10.04,-0.8,0.16,2.27,1.17,0.02,">1 nonsynonymous","T15H Y66N G196W",3
"lib2","SARS-CoV-2","GAATCATGCCAGCCAA",2,25.97,10.78,-0.06,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATCATGTGGGGGCC",8,73.97,9.86,-0.97,0.09,2.25,1.04,0,">1 nonsynonymous","N13R N58I",2
"lib2","SARS-CoV-2","GAATCATTAACGCAAG",3,48.81,10.19,-0.65,0.03,2.93,1.06,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","GAATCATTAGAGAATG",16,186.45,10.89,0.06,0.04,2.92,1.07,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GAATCATTAGCTTCAC",2,29.24,10.91,0.07,0.07,2.9,1.12,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","GAATCATTCTAAGTAT",2,7.42,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","T46V E76I R136P I142D F160I",5
"lib2","SARS-CoV-2","GAATCCAAGATGCGGA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","F8L T55G K94L K114* F167P",5
"lib2","SARS-CoV-2","GAATCCAAGTGGAGCC",9,112.95,10.81,-0.03,0.05,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GAATCCACACTAGACA",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53E L95P N107E I138K C158L",5
"lib2","SARS-CoV-2","GAATCCACAGTATACA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","N4* S45I L60I K128S",4
"lib2","SARS-CoV-2","GAATCCACGCTCTTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K E141A E186H",3
"lib2","SARS-CoV-2","GAATCCAGACATTGTC",3,28.51,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","T63L D68W W106E Y165G S184P K198A",6
"lib2","SARS-CoV-2","GAATCCAGCCCCGAAA",9,130.79,10.51,-0.32,0.04,2.94,1.06,0,">1 nonsynonymous","V32A H189Y C195N",3
"lib2","SARS-CoV-2","GAATCCAGTTTCAAAT",3,16.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F62V V65T I88F",3
"lib2","SARS-CoV-2","GAATCCATACTCCCCT",2,20.42,10.81,-0.02,0.05,2.95,1.08,0,"1 nonsynonymous","P197M",1
"lib2","SARS-CoV-2","GAATCCATATTGGATG",1,7.18,8.73,-2.11,0.2,2.8,1.03,0.01,">1 nonsynonymous","S43L G74S Q168T",3
"lib2","SARS-CoV-2","GAATCCCCCAAGTGCA",4,60.53,10.76,-0.07,0.06,2.92,1.05,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","GAATCCCCTCACCAAT",3,40.1,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K56P Y178E",2
"lib2","SARS-CoV-2","GAATCCCCTTATAATT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","P7D N13* K114R Y121Q",4
"lib2","SARS-CoV-2","GAATCCCTATGACATA",4,31.74,9.7,-1.14,0.09,2.18,1.01,0,">1 nonsynonymous","V37F S45L W106Q N151T",4
"lib2","SARS-CoV-2","GAATCCGAAAATAACG",2,64.77,8.95,-1.89,0.08,2.53,1.07,0,">1 nonsynonymous","L5P N107H",2
"lib2","SARS-CoV-2","GAATCCGAGAATTCAA",10,168,10.25,-0.58,0.04,2.78,1.02,0,">1 nonsynonymous","T3I G9Y S45N",3
"lib2","SARS-CoV-2","GAATCCGAGTATAACT",1,44.39,10.13,-0.71,0.02,2.97,1.05,0,">1 nonsynonymous","T63Y F156S",2
"lib2","SARS-CoV-2","GAATCCGCAAACTGAA",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F Q84L",2
"lib2","SARS-CoV-2","GAATCCGCACGGAGTA",3,164.04,10.87,0.04,0.04,2.87,1.09,0,"1 nonsynonymous","K199Q",1
"lib2","SARS-CoV-2","GAATCCTAAGTTAGTG",2,48.7,10.53,-0.31,0.1,2.65,1.11,0,"1 nonsynonymous","N120C",1
"lib2","SARS-CoV-2","GAATCCTACAGCAAAT",1,10.32,6.6,-4.23,0.92,1.5,1.08,0.03,">1 nonsynonymous","E10V F99N K114T N130Y E141T",5
"lib2","SARS-CoV-2","GAATCCTACATCCAAA",6,124.52,10.22,-0.62,0.04,2.71,1.05,0,">1 nonsynonymous","V37C V52W",2
"lib2","SARS-CoV-2","GAATCCTACATGACAA",11,69.25,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V52N N120T G146W V182R",4
"lib2","SARS-CoV-2","GAATCCTCCACAGACA",3,22.98,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","Q84M Y165C V182T",3
"lib2","SARS-CoV-2","GAATCCTTGATGATGC",4,58.35,10.72,-0.12,0.06,2.93,1.09,0,">1 nonsynonymous","N1G V37K",2
"lib2","SARS-CoV-2","GAATCGAAAAAGGCAA",4,83.67,10.01,-0.83,0.04,2.96,1.04,0,"1 nonsynonymous","I142W",1
"lib2","SARS-CoV-2","GAATCGAAATCCACCA",2,70.21,10.27,-0.57,0.04,2.96,1.07,0,">1 nonsynonymous","N24K C61S G116L L187H",4
"lib2","SARS-CoV-2","GAATCGAACCAGGACT",11,51.37,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I2T G83T D97L K128G L162P",5
"lib2","SARS-CoV-2","GAATCGAAGACAAACA",4,21.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14R C49V Y119I",3
"lib2","SARS-CoV-2","GAATCGAAGTTGCGCG",2,7.11,7.82,-3.02,0.35,1.5,1,0.04,">1 nonsynonymous","S43I Y93I",2
"lib2","SARS-CoV-2","GAATCGACAACGCCTA",5,74.93,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F8V N64T G86Q N118S",4
"lib2","SARS-CoV-2","GAATCGAGGTTCATTA",8,0.37,NA,NA,NA,NA,NA,NA,"stop","G51* C61L P96R N118I S184R P197R",6
"lib2","SARS-CoV-2","GAATCGATAATGTCCC",14,163.54,10.62,-0.22,0.02,2.92,1.05,0,">1 nonsynonymous","A14N I142M",2
"lib2","SARS-CoV-2","GAATCGATACGATATA",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107T Y175V",2
"lib2","SARS-CoV-2","GAATCGATATTAGGGT",3,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N A33T D90N R124T",4
"lib2","SARS-CoV-2","GAATCGCAAAGACAAT",1,13.24,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12T G86N",2
"lib2","SARS-CoV-2","GAATCGCACAGTCGGC",4,118.04,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N64T C150P F160I",3
"lib2","SARS-CoV-2","GAATCGCCAAAAAACT",1,11.86,8,-2.84,0.18,1.5,1.05,0.01,">1 nonsynonymous","S36R A89C F126G",3
"lib2","SARS-CoV-2","GAATCGCCAATTGCTC",6,36.8,9.61,-1.22,0.06,2.82,1.02,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","GAATCGCTCTCTAATT",1,15.41,8.34,-2.5,0.12,2.02,1.1,0.01,">1 nonsynonymous","G9S L125S L131Q L188V",4
"lib2","SARS-CoV-2","GAATCGCTGAAATGTA",5,45.16,7,-3.84,0.41,1.5,1.17,0.03,">1 nonsynonymous","D68W Y178F",2
"lib2","SARS-CoV-2","GAATCGCTGTAACTCA",1,1.46,NA,NA,NA,NA,NA,NA,"stop","I28G F156*",2
"lib2","SARS-CoV-2","GAATCGGAAATGTAAT",1,17.72,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","P7L K132S A145T P177H",4
"lib2","SARS-CoV-2","GAATCGGAATTTACTA",3,44.88,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12H A81I G155L",3
"lib2","SARS-CoV-2","GAATCGGACTGAATTG",5,119.72,10.88,0.05,0.04,2.93,1.08,0,"1 nonsynonymous","N24K",1
"lib2","SARS-CoV-2","GAATCGGACTTAGATT",4,53.58,10.66,-0.18,0.07,2.93,1.08,0,"1 nonsynonymous","G116H",1
"lib2","SARS-CoV-2","GAATCGGAGAGACCGA",7,25.23,9.82,-1.02,0.25,1.88,1.05,0.03,">1 nonsynonymous","W106S S184A",2
"lib2","SARS-CoV-2","GAATCGGCTATCGTGA",2,34.28,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C61L N92K L125C A192Y",4
"lib2","SARS-CoV-2","GAATCGGTAATGGCAC",3,0.57,NA,NA,NA,NA,NA,NA,"stop","L5V A33V C49L A105* Y119D R124A G174R V182T",8
"lib2","SARS-CoV-2","GAATCGTAAACACATT",9,113.29,9.77,-1.06,0.03,2.95,1.04,0,">1 nonsynonymous","G116C T201P",2
"lib2","SARS-CoV-2","GAATCGTAGCAAATCT",1,23.43,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","S41W C61K D112Q L162V",4
"lib2","SARS-CoV-2","GAATCGTCCCAACCTT",11,4.16,NA,NA,NA,NA,NA,NA,"stop","C6R T46V I80R L125P P133*",5
"lib2","SARS-CoV-2","GAATCTAAAACTCAGG",4,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S Y93S",2
"lib2","SARS-CoV-2","GAATCTAAACAAGCAT",5,56.57,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V11A V37M F47C Y93A F167R",5
"lib2","SARS-CoV-2","GAATCTAAATAATAAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","I72* V103Q E186R",3
"lib2","SARS-CoV-2","GAATCTAACAGAGAGT",1,13.59,10.73,-0.1,0.08,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATCTAACCGACTTT",3,49.12,11,0.17,0.06,3,1.01,0,">1 nonsynonymous","L5H S129D",2
"lib2","SARS-CoV-2","GAATCTAAGGTATTAT",2,21.12,10.58,-0.25,0.14,2.62,1.13,0.01,">1 nonsynonymous","Q84S V173I",2
"lib2","SARS-CoV-2","GAATCTAATATTCCAT",12,169.37,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45Y F156G G166V G174Y",4
"lib2","SARS-CoV-2","GAATCTACACCAATGA",7,63.69,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F44L G86F A89N N118L L125P",5
"lib2","SARS-CoV-2","GAATCTACCACATCAA",13,229.77,8.74,-2.1,0.06,2.91,1.1,0,">1 nonsynonymous","Y119N F156R",2
"lib2","SARS-CoV-2","GAATCTACCAGAATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13K D90S E186* A192E",4
"lib2","SARS-CoV-2","GAATCTACTAAACACA",5,58.73,10.85,0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATCTACTACCCTGG",2,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7F F8L C61I L131S P149L",5
"lib2","SARS-CoV-2","GAATCTAGGCCCTCCA",7,160.96,10.37,-0.47,0.03,2.94,1.02,0,">1 nonsynonymous","G83L Y91F N120V",3
"lib2","SARS-CoV-2","GAATCTAGGGCCAGCT",2,20.63,6.37,-4.47,0.61,1.5,1.09,0.03,">1 nonsynonymous","V103S F134M Q168L",3
"lib2","SARS-CoV-2","GAATCTATCGATATCA",5,25.79,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","F12L S41F Y119C L131D V153W",5
"lib2","SARS-CoV-2","GAATCTCAAGCAATCC",10,10.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V20G N64S K87T L95T L122F G146W",6
"lib2","SARS-CoV-2","GAATCTCAATTTTCTG",9,112.64,9.78,-1.05,0.08,1.89,1.04,0,">1 nonsynonymous","G51V P149F",2
"lib2","SARS-CoV-2","GAATCTCACATCTAAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96T S129I G146F",3
"lib2","SARS-CoV-2","GAATCTCAGGGTTATA",3,32.61,10.37,-0.47,0.04,2.88,1.1,0,">1 nonsynonymous","N24Q Y91H N120Q",3
"lib2","SARS-CoV-2","GAATCTCATGCCTAAT",6,78.1,10.72,-0.11,0.05,2.86,1.11,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","GAATCTCCCTTTAACT",6,43.47,10.71,-0.13,0.04,2.87,1.11,0,"1 nonsynonymous","F134W",1
"lib2","SARS-CoV-2","GAATCTCCTTGTAAAC",8,37.21,7.13,-3.7,0.37,1.5,1.11,0.04,">1 nonsynonymous","S19L C61Y",2
"lib2","SARS-CoV-2","GAATCTCGAGCCCATG",1,0.25,NA,NA,NA,NA,NA,NA,"stop","S19M N24A Y35H F44S I88M D112* S129F F160C",8
"lib2","SARS-CoV-2","GAATCTCTCAAGGTCT",1,49.5,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39P K94E S129T T170V",4
"lib2","SARS-CoV-2","GAATCTCTTATCCGCC",2,29.34,10.51,-0.33,0.05,2.84,1.12,0,">1 nonsynonymous","N24T E135S",2
"lib2","SARS-CoV-2","GAATCTGAAAAGGTCC",10,88.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F8V L95F Y121D",3
"lib2","SARS-CoV-2","GAATCTGACACTTGAG",1,61.48,10.76,-0.08,0.05,2.96,1.06,0,"1 nonsynonymous","T140C",1
"lib2","SARS-CoV-2","GAATCTGAGTGCTTGA",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T P54T A67V V71H N107Q L122H",6
"lib2","SARS-CoV-2","GAATCTGGAGAACACA",3,131.34,10.62,-0.22,0.03,2.95,1.07,0,">1 nonsynonymous","N64G P149T",2
"lib2","SARS-CoV-2","GAATCTGTTCTAAGGC",1,0,NA,NA,NA,NA,NA,NA,"stop","V77M Y119* E154Q Q163R",4
"lib2","SARS-CoV-2","GAATCTTAACGCATAT",5,36.51,6.14,-4.69,0.7,1.5,1.14,0.02,">1 nonsynonymous","T3M Y35S G86M N151I E186N",5
"lib2","SARS-CoV-2","GAATCTTCATTAAGAT",3,7.77,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R16L N58I F99C N120E",4
"lib2","SARS-CoV-2","GAATCTTCCAGAGACT",4,13.68,10.14,-0.7,0.2,2.23,1.1,0.02,">1 nonsynonymous","P133R P191S",2
"lib2","SARS-CoV-2","GAATCTTGATACAAGT",16,64.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y93K G101R N151S P161D V181Y",5
"lib2","SARS-CoV-2","GAATCTTGCGATAAGG",5,42.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R124I E186D T201W",3
"lib2","SARS-CoV-2","GAATCTTGTACTTAAA",4,56.69,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S129G G172R",2
"lib2","SARS-CoV-2","GAATCTTTCATTCTTT",12,333.53,9.14,-1.69,0.04,2.91,1.09,0,">1 nonsynonymous","V37M G146K",2
"lib2","SARS-CoV-2","GAATCTTTCGACTTCA",19,3.27,NA,NA,NA,NA,NA,NA,"stop","Y39* C49Y K128I T140Q N157I",5
"lib2","SARS-CoV-2","GAATGAAAATAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","S53N Q79P S129T K199*",4
"lib2","SARS-CoV-2","GAATGAAACACTTCAG",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F W106P",2
"lib2","SARS-CoV-2","GAATGAAACTAAGATT",6,68.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29L G83W D90L C102T",4
"lib2","SARS-CoV-2","GAATGAAAGCACCTTA",4,34.18,6.44,-4.39,0.6,1.5,1.15,0.04,">1 nonsynonymous","F8Y S69M D98V D112G K128C",5
"lib2","SARS-CoV-2","GAATGAAATAACACAC",14,87.68,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K48M D75P G172V",3
"lib2","SARS-CoV-2","GAATGAAATAGTTAGA",6,17.04,7.63,-3.21,0.34,1.5,1.13,0.05,">1 nonsynonymous","S41H K48Q Q84I P96R",4
"lib2","SARS-CoV-2","GAATGAAATCTCCAAT",5,6.11,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I104G N120H L183P",3
"lib2","SARS-CoV-2","GAATGAACCGTACTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","V20R T46A T63* T100F Y119* N157R V173S",7
"lib2","SARS-CoV-2","GAATGAACCTAAGTCG",3,1.2,NA,NA,NA,NA,NA,NA,"stop","S19R Q144*",2
"lib2","SARS-CoV-2","GAATGAACGGCTTAAT",7,87.83,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A89I D112F",2
"lib2","SARS-CoV-2","GAATGAACGGGGTTAT",2,52.91,10.66,-0.17,0.06,2.92,1.08,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","GAATGAACTACTTCAC",4,45.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K56Y V77N I88M K199R",4
"lib2","SARS-CoV-2","GAATGAACTGCATACA",6,77.51,10.56,-0.27,0.04,2.98,1.03,0,">1 nonsynonymous","N24Q F62G",2
"lib2","SARS-CoV-2","GAATGAAGACACCTCT",3,69.13,10.67,-0.16,0.05,2.89,1.12,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","GAATGAAGACTGCGCA",1,9.5,10.35,-0.49,0.36,1.73,1,0.06,">1 nonsynonymous","L5K D90Y R127S",3
"lib2","SARS-CoV-2","GAATGAAGATGATGAT",3,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G W23F F62N Q84K K94S",5
"lib2","SARS-CoV-2","GAATGAAGTTGAAAGA",16,210.4,10.21,-0.62,0.03,2.88,1.04,0,">1 nonsynonymous","C61Y G116I",2
"lib2","SARS-CoV-2","GAATGAATAATTCGAA",2,26.11,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","GAATGAATCGACCCGA",8,92.37,8.57,-2.27,0.08,3,1.04,0,">1 nonsynonymous","L60F Y119T Q163E",3
"lib2","SARS-CoV-2","GAATGAATCTGGTTCG",6,18.99,6,-4.84,2,3,1.06,0,">1 nonsynonymous","Y50R Y93S",2
"lib2","SARS-CoV-2","GAATGACAACAATATA",6,163.46,8.88,-1.96,0.07,2.76,1.08,0,">1 nonsynonymous","T63A N118M P169T",3
"lib2","SARS-CoV-2","GAATGACAGAGAATCA",1,28.71,7.96,-2.87,0.23,2.72,1.19,0.02,">1 nonsynonymous","Y119P P149F G166L G174T",4
"lib2","SARS-CoV-2","GAATGACATTAGTTTT",3,44.84,9.11,-1.73,0.24,1.52,1.13,0.02,">1 nonsynonymous","S45V T55K W106I T201F",4
"lib2","SARS-CoV-2","GAATGACGACAATATA",15,166.39,10.65,-0.19,0.03,2.92,1.06,0,"1 nonsynonymous","D59W",1
"lib2","SARS-CoV-2","GAATGACGAGCGGTTA",6,66.06,6,-4.84,1.74,1.5,1.16,0.01,">1 nonsynonymous","N13S R136H V173S K199L",4
"lib2","SARS-CoV-2","GAATGACTACTGATAG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","A81T L95I P133*",3
"lib2","SARS-CoV-2","GAATGACTCAAAACAC",1,19.37,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAATGACTTCTCCGCT",3,15.65,8.33,-2.5,0.15,1.78,1.06,0.01,">1 nonsynonymous","I142L L162W",2
"lib2","SARS-CoV-2","GAATGAGAGATTGGCT",2,40.01,10.87,0.04,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATGAGCAACATAGT",4,0.94,NA,NA,NA,NA,NA,NA,"stop","P96F W106S G116P S139*",4
"lib2","SARS-CoV-2","GAATGAGCCGACTTCA",3,29.08,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6W N64V N118R G166L",4
"lib2","SARS-CoV-2","GAATGAGGTTTGTGAA",8,56.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P82R N109D",2
"lib2","SARS-CoV-2","GAATGAGTACAAGGAT",9,109.9,9.13,-1.71,0.32,1.5,1,0.05,">1 nonsynonymous","V77L R127I S139N L188N",4
"lib2","SARS-CoV-2","GAATGAGTCAAACCCT",6,65.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7I F44A T55K T63V D112Q",5
"lib2","SARS-CoV-2","GAATGAGTCACAAGCA",2,62.64,10.62,-0.21,0.05,2.98,1.04,0,">1 nonsynonymous","A14N K198E",2
"lib2","SARS-CoV-2","GAATGAGTTGTGACTA",1,7.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10L K56S F62I I88T Q144T G174R T201L",7
"lib2","SARS-CoV-2","GAATGATAAAGCAAAA",5,0.28,NA,NA,NA,NA,NA,NA,"stop","L5T Y93* G172V",3
"lib2","SARS-CoV-2","GAATGATAACCTGTTA",4,22.28,9.91,-0.93,0.14,2.1,1.02,0.01,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","GAATGATAATACTATA",1,8.66,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G51N A89F F160A T170L",4
"lib2","SARS-CoV-2","GAATGATATAAAAGCT",5,20.74,8.01,-2.82,0.19,1.55,1.08,0.02,">1 nonsynonymous","N1C D34L L57F Q168I",4
"lib2","SARS-CoV-2","GAATGATCAAGTCTCC",1,79.72,10.03,-0.81,0.06,2.68,1.04,0,">1 nonsynonymous","I2S E10C D90R",3
"lib2","SARS-CoV-2","GAATGATGGAAATACC",2,10.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D90C Y119L Q168P G196F",4
"lib2","SARS-CoV-2","GAATGATGTCATATAA",5,68.26,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5T Y93W D98L F126S S147Y Q176K",6
"lib2","SARS-CoV-2","GAATGATTAGACTGAG",11,108.93,10.56,-0.27,0.04,2.9,1.09,0,">1 nonsynonymous","W23F A42V",2
"lib2","SARS-CoV-2","GAATGCAAAAAAAGAC",3,7.61,9.49,-1.34,0.24,1.69,1.35,0.02,">1 nonsynonymous","G9V C49F",2
"lib2","SARS-CoV-2","GAATGCAAAAACCTCC",5,101.91,10.81,-0.03,0.04,2.88,1.11,0,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","GAATGCAAAATAAAGA",2,26.47,9.13,-1.71,0.05,2.39,1.04,0,">1 nonsynonymous","G9T P133S P169L",3
"lib2","SARS-CoV-2","GAATGCAAATTAAACA",5,48.67,10.58,-0.26,0.08,2.87,1.05,0,">1 nonsynonymous","T3P D34N",2
"lib2","SARS-CoV-2","GAATGCAAATTCCTAT",1,8.98,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y93C D98S T201L",3
"lib2","SARS-CoV-2","GAATGCACAGGCAGTT",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64T D97R V103G G116A",4
"lib2","SARS-CoV-2","GAATGCACATTCTGAT",2,46.12,9.18,-1.65,0.07,2.98,1.09,0,">1 nonsynonymous","T63R G146E",2
"lib2","SARS-CoV-2","GAATGCACGATACTGA",1,90.24,10.83,-0.01,0.05,2.94,1.1,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","GAATGCACTGATCATA",1,43.27,10.82,-0.01,0.04,3,1.01,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GAATGCAGAGCCATAG",3,75.98,9.82,-1.02,0.07,2.65,1.07,0,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","GAATGCATGTCTAGGT",19,187.92,8.34,-2.49,0.09,2.72,1.02,0,">1 nonsynonymous","K26V K87T D112S",3
"lib2","SARS-CoV-2","GAATGCCAACGCCATG",1,119.49,10.2,-0.64,0.04,2.79,1,0,">1 nonsynonymous","Y35E F160S",2
"lib2","SARS-CoV-2","GAATGCCACTAAGCCA",1,10.42,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","N4H R27L Y35N Y119I R127V",5
"lib2","SARS-CoV-2","GAATGCCATCAACTTA",2,29.84,10.68,-0.15,0.07,2.87,1.1,0,">1 nonsynonymous","I2H D75H",2
"lib2","SARS-CoV-2","GAATGCCGCTACCTGC",16,0.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77S Y119S",2
"lib2","SARS-CoV-2","GAATGCCGGACCACAT",6,167.8,8.43,-2.41,0.09,2.2,1.09,0,">1 nonsynonymous","G9L P54V Q176A",3
"lib2","SARS-CoV-2","GAATGCCTTAACTCTT",4,45.96,10.93,0.09,0.07,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATGCCTTAAGGTAC",17,330.36,8.3,-2.54,0.12,1.92,1.08,0.01,">1 nonsynonymous","N107H V115W",2
"lib2","SARS-CoV-2","GAATGCGATCAATTTT",8,5.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13G C31Y S108W",3
"lib2","SARS-CoV-2","GAATGCGCGCCAGAAT",10,172.86,9.3,-1.54,0.07,2.17,1.06,0,">1 nonsynonymous","S41M L95V L122M P149L Q176M T201M",6
"lib2","SARS-CoV-2","GAATGCGGTGATGATA",6,88.66,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25A R73M R136S",3
"lib2","SARS-CoV-2","GAATGCTAATAAAAAA",7,124.92,10.36,-0.48,0.05,2.66,1.03,0,">1 nonsynonymous","C61R P133C S164R",3
"lib2","SARS-CoV-2","GAATGCTAGTGCCTAA",1,12.42,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41I G86R",2
"lib2","SARS-CoV-2","GAATGCTCATCAAAAG",4,0,NA,NA,NA,NA,NA,NA,"stop","S41I D98* P177R",3
"lib2","SARS-CoV-2","GAATGCTCTTTAACCT",5,17.89,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P82Q N120T Q144S",3
"lib2","SARS-CoV-2","GAATGCTGTGACCCCG",1,40.5,8.16,-2.67,0.14,2.15,1.04,0.01,"1 nonsynonymous","Y143K",1
"lib2","SARS-CoV-2","GAATGCTTCTATTCAC",3,12.68,10.88,0.04,0.05,2.94,1.05,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","GAATGCTTTGGCTGTT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","S36L T201*",2
"lib2","SARS-CoV-2","GAATGGAAAGAGGTTA",5,37.19,6.27,-4.56,0.53,1.5,1.11,0.02,">1 nonsynonymous","R127M P133I S184F",3
"lib2","SARS-CoV-2","GAATGGAAATGATGCA",7,0.16,NA,NA,NA,NA,NA,NA,"stop","T85* Y175F",2
"lib2","SARS-CoV-2","GAATGGACAATCAGTT",8,30.55,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V77E I104S S113Y G152V",4
"lib2","SARS-CoV-2","GAATGGACTGATCCAG",31,272.09,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D68V S147Y P161L",3
"lib2","SARS-CoV-2","GAATGGATACCCCATA",4,41.8,6,-4.84,1.4,1.5,1.23,0.03,">1 nonsynonymous","G83F I138G A145Y Y175M",4
"lib2","SARS-CoV-2","GAATGGCAAATCGTGC",2,26.78,10.42,-0.42,0.06,2.99,1,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","GAATGGCAACAACCGT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","S41T S45* E141L",3
"lib2","SARS-CoV-2","GAATGGCACGAATCCG",3,71.57,10.65,-0.19,0.04,2.98,1.05,0,"1 nonsynonymous","N40Y",1
"lib2","SARS-CoV-2","GAATGGCCTTTTGCCT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","P54* F62P D90* G155R",4
"lib2","SARS-CoV-2","GAATGGCTGAACTGTA",10,135.26,10.71,-0.13,0.02,3,1.02,0,">1 nonsynonymous","L5R S36W",2
"lib2","SARS-CoV-2","GAATGGGACCAAAAGC",1,28.68,10.14,-0.7,0.07,2.83,1.04,0,">1 nonsynonymous","D34K Y175F",2
"lib2","SARS-CoV-2","GAATGGGTATGAACCA",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W R25D I88R",3
"lib2","SARS-CoV-2","GAATGGTAAGAGATAT",1,10.11,9.54,-1.3,0.2,2.71,1,0.01,"1 nonsynonymous","L162Y",1
"lib2","SARS-CoV-2","GAATGGTACAGGCTAC",4,63.92,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y39N G51H F62T D68R E76S R136M G146V C150L",8
"lib2","SARS-CoV-2","GAATGGTAGATGAGTT",3,42.28,10.8,-0.04,0.05,2.94,1.05,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","GAATGGTCCCGTACGG",6,110.52,8.84,-2,0.04,2.88,1.1,0,">1 nonsynonymous","G83L Y119L",2
"lib2","SARS-CoV-2","GAATGGTCTTATGCGC",7,135.6,10.48,-0.36,0.04,2.94,1.02,0,">1 nonsynonymous","R27M Q144S P149L",3
"lib2","SARS-CoV-2","GAATGGTGTACTGATG",9,58.91,9.17,-1.66,0.08,2.8,1.1,0,">1 nonsynonymous","A42V T100C G117R",3
"lib2","SARS-CoV-2","GAATGGTTCTATCTGT",2,44.8,10.88,0.04,0.08,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATGTAAAGAGAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","V20L S43T D59F G74I D112* G196L",6
"lib2","SARS-CoV-2","GAATGTAACAACTCTG",3,19.61,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F8K G86F",2
"lib2","SARS-CoV-2","GAATGTAACGAAATCA",1,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142W",1
"lib2","SARS-CoV-2","GAATGTAACGACGATG",3,0.38,NA,NA,NA,NA,NA,NA,"stop","V37L A81F Y91* S113M T201P",5
"lib2","SARS-CoV-2","GAATGTACGAGAAGCT",4,75.66,10.61,-0.23,0.05,2.99,1.02,0,">1 nonsynonymous","S36M I104L",2
"lib2","SARS-CoV-2","GAATGTAGAACTGCCG",16,381.45,10.8,-0.04,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATGTAGCTTAGCAT",14,143.39,9.59,-1.25,0.06,2.94,1.05,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","GAATGTAGTAGAAAGC",14,129.94,9.6,-1.23,0.06,1.93,1.04,0,"1 nonsynonymous","A89R",1
"lib2","SARS-CoV-2","GAATGTCAAATACCAC",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W S129T K199S",3
"lib2","SARS-CoV-2","GAATGTCAATGGGAAA",2,11.85,10.53,-0.31,0.08,2.88,1.08,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","GAATGTCATATTGGAA",8,75.6,10.87,0.04,0.04,2.92,1.08,0,">1 nonsynonymous","K114Q T201M",2
"lib2","SARS-CoV-2","GAATGTCATTAATTTC",3,30.34,10.89,0.06,0.11,2.8,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATGTCCAAAACTGT",13,244.73,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F99V Q176I",2
"lib2","SARS-CoV-2","GAATGTCCAATCTTGC",9,33.08,10.66,-0.17,0.05,2.97,1.03,0,">1 nonsynonymous","T63S E154M",2
"lib2","SARS-CoV-2","GAATGTCCTCTTAAAG",5,66.59,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W106S D137G P161A Y175D",4
"lib2","SARS-CoV-2","GAATGTCTAAAATCAG",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24E K128T F156C",3
"lib2","SARS-CoV-2","GAATGTCTGCGTGGAA",1,40.7,10.62,-0.21,0.07,2.89,1.1,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","GAATGTGATACACTGG",5,18.55,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A18R L60M P96S V103N N120Y K132C",6
"lib2","SARS-CoV-2","GAATGTGCAACAAATT",8,50.36,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N24R Y66V A105P",3
"lib2","SARS-CoV-2","GAATGTGCATTTGCCG",3,17.52,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D59I Q84R V153S V182T",4
"lib2","SARS-CoV-2","GAATGTGCCCGACTTC",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G T85S V103W L122Q",4
"lib2","SARS-CoV-2","GAATGTGTCTAGTAAC",9,221.82,10.55,-0.28,0.04,2.93,1.08,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","GAATGTGTTGTCACCT",8,83.08,8.89,-1.95,0.19,1.65,1.13,0.01,">1 nonsynonymous","R78L D90T N151I",3
"lib2","SARS-CoV-2","GAATGTTATACGTCAA",1,28.48,10.27,-0.56,0.06,2.97,1.03,0,">1 nonsynonymous","E10V D97V",2
"lib2","SARS-CoV-2","GAATGTTCACGTCAAG",9,77.45,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V11C A67V I80M D97I",4
"lib2","SARS-CoV-2","GAATGTTGCAACATGT",5,6.07,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V103Y C158D F185T",3
"lib2","SARS-CoV-2","GAATGTTTCACACCAG",9,120.17,10.79,-0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATTAAAAATCCGTA",8,45.95,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","G9W N30K C49V Y93H N110C K132E Y178T",7
"lib2","SARS-CoV-2","GAATTAAAACTTAGGT",8,64.93,10.54,-0.29,0.05,2.89,1.09,0,">1 nonsynonymous","N4T I142Y",2
"lib2","SARS-CoV-2","GAATTAAAAGTCATGT",1,19.63,10.66,-0.18,0.18,2.63,1.19,0.03,">1 nonsynonymous","T148G H189V",2
"lib2","SARS-CoV-2","GAATTAAACACTGTCG",4,22.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P C49A Y143V N157R",4
"lib2","SARS-CoV-2","GAATTAAACGAACGAG",9,92.3,10.5,-0.34,0.04,2.9,1.07,0,">1 nonsynonymous","N13R A42R",2
"lib2","SARS-CoV-2","GAATTAAACGGATTTA",7,161.93,10.79,-0.04,0.06,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATTAAACGTAGTCG",4,4.95,NA,NA,NA,NA,NA,NA,"stop","G83F Y93* F99R W106R K114R G155H K199W",7
"lib2","SARS-CoV-2","GAATTAAAGAACTAAG",10,132.63,10.72,-0.12,0.03,2.85,1.15,0,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","GAATTAAAGACAATGT",5,74.7,10.53,-0.31,0.06,2.92,1.08,0,"1 nonsynonymous","T148C",1
"lib2","SARS-CoV-2","GAATTAAAGACCAAAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAATTAAAGGGAAAAA",1,5.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Q F99N N118Y E141D K198T",5
"lib2","SARS-CoV-2","GAATTAAATATCAAAA",7,120.87,9.52,-1.32,0.1,1.79,1.1,0,"1 nonsynonymous","R136P",1
"lib2","SARS-CoV-2","GAATTAAATATCAATA",2,51.66,8.6,-2.24,0.15,2.2,1.08,0.01,">1 nonsynonymous","F156W Q163T P177S",3
"lib2","SARS-CoV-2","GAATTAAATCGCTCAA",9,108.29,10.81,-0.03,0.04,2.99,1.04,0,"1 nonsynonymous","F160W",1
"lib2","SARS-CoV-2","GAATTAAATTTGATCA",6,62.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50P T63L V115H",3
"lib2","SARS-CoV-2","GAATTAACAGATGACC",16,470.15,10.7,-0.14,0.03,2.96,1.04,0,">1 nonsynonymous","G9S S41I K199L",3
"lib2","SARS-CoV-2","GAATTAACTAGGCGCA",3,38.82,10.81,-0.03,0.04,2.9,1.07,0,">1 nonsynonymous","A42G T55A D97L K199Q",4
"lib2","SARS-CoV-2","GAATTAACTTTTGGTA",14,258.44,6.58,-4.25,0.2,1.5,1.13,0,">1 nonsynonymous","N40S C150K E154Q",3
"lib2","SARS-CoV-2","GAATTAAGACATATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E A105M Y119N G152C",4
"lib2","SARS-CoV-2","GAATTAAGAGAGCCAT",14,55.5,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5W P82L Y91L D137Q S200P",5
"lib2","SARS-CoV-2","GAATTAAGAGGATTAA",2,10.52,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T63L Y93Q I104K Y121L G146T",5
"lib2","SARS-CoV-2","GAATTAAGGAAAGACC",5,85.57,9.76,-1.08,0.07,2.72,1.03,0,">1 nonsynonymous","C6D T15N N171S",3
"lib2","SARS-CoV-2","GAATTAATAACGTAAT",4,5.26,6,-4.84,2,3,1.1,0.02,">1 nonsynonymous","N4V F99S Y159T",3
"lib2","SARS-CoV-2","GAATTAATCTAGGAAA",5,49.1,10.74,-0.1,0.06,2.91,1.11,0,"1 nonsynonymous","N4M",1
"lib2","SARS-CoV-2","GAATTAATTTAAGCGT",4,0.68,NA,NA,NA,NA,NA,NA,"stop","V37A S41* S53T",3
"lib2","SARS-CoV-2","GAATTACACCTCAAGG",7,131.2,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R27N N64L V71E W106L G146T E154S Q176L",7
"lib2","SARS-CoV-2","GAATTACACTCAACTT",1,11.22,7.61,-3.23,0.37,1.5,1.1,0.04,">1 nonsynonymous","I2N W23K N40G K128H",4
"lib2","SARS-CoV-2","GAATTACAGAAATCAC",5,27.79,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","F8T I88W N130V G166V",4
"lib2","SARS-CoV-2","GAATTACAGCCCAAGG",9,74.33,10.72,-0.12,0.04,2.9,1.09,0,"1 nonsynonymous","G51Q",1
"lib2","SARS-CoV-2","GAATTACATACACACA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","R27V K48R D98G L122* T201D",5
"lib2","SARS-CoV-2","GAATTACCAACGCTCT",10,1.64,NA,NA,NA,NA,NA,NA,"stop","V11I A145V P177S S200*",4
"lib2","SARS-CoV-2","GAATTACCTTGCATTC",12,161.87,8.5,-2.34,0.05,2.39,1.08,0,">1 nonsynonymous","N4S A14R S43V D90N F156C",5
"lib2","SARS-CoV-2","GAATTACTTGAGACAG",7,39.33,9.1,-1.73,0.36,1.5,1,0.06,">1 nonsynonymous","F8W L57E A81E D90F V173L A190V",6
"lib2","SARS-CoV-2","GAATTAGAGCATTTAG",4,8.73,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C61S N107G P133Q",3
"lib2","SARS-CoV-2","GAATTAGATGACGCAG",1,16.84,6,-4.84,0.55,3,1.08,0,">1 nonsynonymous","C49L T55N T63S F134P E154Q",5
"lib2","SARS-CoV-2","GAATTAGATTAAGTTC",10,187.16,9.68,-1.15,0.02,2.89,1.08,0,">1 nonsynonymous","C6E L125A",2
"lib2","SARS-CoV-2","GAATTAGCAACCCTTA",9,0.58,NA,NA,NA,NA,NA,NA,"stop","Y35E P82S W106*",3
"lib2","SARS-CoV-2","GAATTAGCATTATACT",8,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S L60R Y91G",3
"lib2","SARS-CoV-2","GAATTAGCTGAAAAAC",1,14.56,10.12,-0.72,0.08,2.91,1.05,0,">1 nonsynonymous","C6F C61L",2
"lib2","SARS-CoV-2","GAATTAGCTTTAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R Y93S",2
"lib2","SARS-CoV-2","GAATTAGTCCAGCAAA",9,238.92,10.63,-0.21,0.05,2.91,1.06,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","GAATTAGTCTCAAGCT",3,22.26,9.19,-1.64,0.13,2.33,1.04,0.01,">1 nonsynonymous","R136A I142Y",2
"lib2","SARS-CoV-2","GAATTAGTTGCATCAG",3,10.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y93P S200Y",2
"lib2","SARS-CoV-2","GAATTATAACCTAAAT",2,15.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W K26Y Y119Q",3
"lib2","SARS-CoV-2","GAATTATAAGGTGTCC",6,28.66,8.33,-2.51,0.4,1.5,1.16,0.06,">1 nonsynonymous","W23S C49K V153K T170R",4
"lib2","SARS-CoV-2","GAATTATAATGAGCAA",1,5.17,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","A14V Y50F I88C",3
"lib2","SARS-CoV-2","GAATTATACAGTAAGG",9,152.13,10.32,-0.52,0.05,2.7,1.07,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","GAATTATACCTATAAG",1,44.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D N110S Y175K",3
"lib2","SARS-CoV-2","GAATTATACGTGATTT",5,74.28,10.44,-0.4,0.06,2.92,1.08,0,"1 nonsynonymous","F156Y",1
"lib2","SARS-CoV-2","GAATTATACTAATGAT",15,128.59,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S45R K114T R124T Y165T",4
"lib2","SARS-CoV-2","GAATTATACTGTACGA",7,43.61,6.14,-4.7,1.34,1.5,1.19,0.07,">1 nonsynonymous","I88F G101C N110I",3
"lib2","SARS-CoV-2","GAATTATATAATTTAT",3,33.37,6.43,-4.41,0.58,1.5,1.16,0.03,">1 nonsynonymous","P54L A81D G86C T100S Q144K",5
"lib2","SARS-CoV-2","GAATTATCTATCCGCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y A14W D34G F44V K87S G166S",6
"lib2","SARS-CoV-2","GAATTATTAAATGCGG",16,80.69,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","W106G T148I F185V",3
"lib2","SARS-CoV-2","GAATTATTGAACAAAA",1,67.15,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F62I D98L I142V Q176E",4
"lib2","SARS-CoV-2","GAATTCAAAATTCCTT",24,183.47,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A33L G51A I88N D98G",4
"lib2","SARS-CoV-2","GAATTCAAACGTCCTT",2,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H D59M P96G D97N A105T Y121S",6
"lib2","SARS-CoV-2","GAATTCAACTGCATGA",3,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90G Y175W V182C",3
"lib2","SARS-CoV-2","GAATTCAATTGTAACG",5,47.83,10.73,-0.11,0.04,2.91,1.12,0,"1 nonsynonymous","V173N",1
"lib2","SARS-CoV-2","GAATTCACGATTATCA",31,578.53,8.69,-2.15,0.06,2.94,1.05,0,">1 nonsynonymous","F44H F126T",2
"lib2","SARS-CoV-2","GAATTCAGAATTCGGA",3,38.79,10.15,-0.68,0.08,2.78,1.03,0,">1 nonsynonymous","S36L K56R L60F A105S",4
"lib2","SARS-CoV-2","GAATTCAGCCTCCAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y A81F E141K",3
"lib2","SARS-CoV-2","GAATTCAGCGCCGCGC",8,174.76,9.68,-1.15,0.08,1.88,1.08,0,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","GAATTCAGGCATTATT",10,97.13,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V32H L95G V103Y Y121S",4
"lib2","SARS-CoV-2","GAATTCAGTACGAAAA",6,29.73,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","G101D",1
"lib2","SARS-CoV-2","GAATTCATAAAAATCC",1,22.06,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23L C61S S129Y G166E V181T",5
"lib2","SARS-CoV-2","GAATTCATAAATCATA",2,33.15,10.86,0.02,0.04,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GAATTCATAAGCACAA",3,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N R27T V37S Y93L N107E S139W G155T F160P",8
"lib2","SARS-CoV-2","GAATTCATAATATTAC",2,50.24,10.77,-0.07,0.06,2.88,1.14,0,"1 nonsynonymous","S200I",1
"lib2","SARS-CoV-2","GAATTCATCATATAAC",4,69.53,10.51,-0.33,0.05,2.91,1.09,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","GAATTCATTAAGAAAG",2,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69P T100R Y119P P149M F160T",5
"lib2","SARS-CoV-2","GAATTCATTCTGACAT",11,39.3,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","Y35T G74M A81V W106T T140R F156V L187M",7
"lib2","SARS-CoV-2","GAATTCCCAAAACTAA",2,38.25,10.61,-0.22,0.08,2.67,1.32,0,"1 nonsynonymous","G116K",1
"lib2","SARS-CoV-2","GAATTCCCTAATCTCG",10,154.7,10.75,-0.09,0.07,2.87,1.08,0,"1 nonsynonymous","D97K",1
"lib2","SARS-CoV-2","GAATTCCGGCTTTTTC",1,51.19,6,-4.84,1.94,1.5,1.19,0.02,">1 nonsynonymous","F70L D90S Y178Q",3
"lib2","SARS-CoV-2","GAATTCCGTGACTACT",5,42.76,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23S S29V F44N R124Y",4
"lib2","SARS-CoV-2","GAATTCCTTGACCACA",3,62.91,10.88,0.04,0.06,2.98,1.04,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","GAATTCGAACCGAAAT",8,0.29,NA,NA,NA,NA,NA,NA,"stop","T15H Y35*",2
"lib2","SARS-CoV-2","GAATTCGATAACTACA",20,127.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R73E P96L Q144L C150G",4
"lib2","SARS-CoV-2","GAATTCGATAAGTGAC",3,15.98,8.99,-1.85,0.11,2.53,1.07,0.01,">1 nonsynonymous","S36C S43M C61H S147D G166V",5
"lib2","SARS-CoV-2","GAATTCGATACTCGAT",5,38.62,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8S A33S C61E R73E C150L N151H Q163L",7
"lib2","SARS-CoV-2","GAATTCGATAGTATTC",3,10.48,10.17,-0.66,0.16,2.6,1.13,0.01,">1 nonsynonymous","F44D S53F",2
"lib2","SARS-CoV-2","GAATTCGATCTAAGAG",1,5.29,7.93,-2.9,0.16,1.64,1,0.01,">1 nonsynonymous","L5Y D68S T85N S129M",4
"lib2","SARS-CoV-2","GAATTCGTACCAAGTT",4,0.16,NA,NA,NA,NA,NA,NA,"stop","A42* N58D L95* S139R",4
"lib2","SARS-CoV-2","GAATTCGTAGTAAAAA",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y D90I T100P G166A",4
"lib2","SARS-CoV-2","GAATTCGTCCATTTAA",7,76.35,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F62N Q84L Y121D R127L",4
"lib2","SARS-CoV-2","GAATTCTAATGATCAA",11,329.86,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K48M F70S Y119Q F126L A145L",5
"lib2","SARS-CoV-2","GAATTCTCTCATCAAC",2,39.13,9.18,-1.66,0.11,1.77,1.05,0,">1 nonsynonymous","G51V D90L",2
"lib2","SARS-CoV-2","GAATTCTCTTAGTGTT",2,6.87,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","A81I P96T",2
"lib2","SARS-CoV-2","GAATTCTTAATACACA",13,0.73,NA,NA,NA,NA,NA,NA,"stop","A14I A89G V103N V115*",4
"lib2","SARS-CoV-2","GAATTCTTATCTGCAT",4,114.59,8.54,-2.29,0.07,2.75,1.07,0,">1 nonsynonymous","L5Q Y91F R136T N157G",4
"lib2","SARS-CoV-2","GAATTCTTGGTCACGT",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E A18T Y165L T201R",4
"lib2","SARS-CoV-2","GAATTGAAAATCGGCG",8,26.02,10.4,-0.44,0.04,3,1.01,0,">1 nonsynonymous","D98A E154L F160Y",3
"lib2","SARS-CoV-2","GAATTGAAGACCACTG",8,48.43,6,-4.84,2,1.5,1.33,0.02,">1 nonsynonymous","T55I A105P L162S",3
"lib2","SARS-CoV-2","GAATTGACCATTTCTG",9,0.03,NA,NA,NA,NA,NA,NA,"stop","T3* E10T P54I W106F S184*",5
"lib2","SARS-CoV-2","GAATTGACCGCAAAGA",6,7.69,NA,NA,NA,NA,NA,NA,"stop","S53P S69L D75M I88* Q176P",5
"lib2","SARS-CoV-2","GAATTGACGTATGACC",2,17.89,10.89,0.05,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","GAATTGACTAATGAAC",1,0.45,NA,NA,NA,NA,NA,NA,"stop","N13R I72S A105* D112F F160I",5
"lib2","SARS-CoV-2","GAATTGAGGCGAGTAT",5,19.05,9.9,-0.93,0.12,2.27,1.01,0.01,">1 nonsynonymous","R16A G152L E186V",3
"lib2","SARS-CoV-2","GAATTGAGTATGCCTA",7,81.98,6,-4.84,1.95,1.5,1.16,0.02,"1 nonsynonymous","N92Y",1
"lib2","SARS-CoV-2","GAATTGATAGAGCCCC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","I2* E10L Y121M V153M",4
"lib2","SARS-CoV-2","GAATTGATTCTTATAA",5,44.95,10.8,-0.03,0.07,2.81,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATTGATTGTAGGGT",3,15.52,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15F A89L F99S I104F S129T I138R",6
"lib2","SARS-CoV-2","GAATTGCCAAACACGA",2,12.29,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N1M V37L D98V A105L",4
"lib2","SARS-CoV-2","GAATTGCCAACCCGGA",5,98.32,10.57,-0.26,0.04,2.95,1.05,0,">1 nonsynonymous","G9L V32I S41M D59G",4
"lib2","SARS-CoV-2","GAATTGCCATAGACTT",14,66.7,6,-4.84,2,1.5,1.29,0.01,">1 nonsynonymous","L95S F167I T201K",3
"lib2","SARS-CoV-2","GAATTGCCCCACGAAC",3,27.15,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I88V D137C N151S Y159T",4
"lib2","SARS-CoV-2","GAATTGCCTAGCTTCA",5,78,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G9Y G86S F126T G146E",4
"lib2","SARS-CoV-2","GAATTGCGAACGCCGC",2,34.32,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N1I N92W F167V",3
"lib2","SARS-CoV-2","GAATTGCTACAAACTC",11,293.73,9.99,-0.85,0.05,2.32,1.08,0,">1 nonsynonymous","R136Q V173S",2
"lib2","SARS-CoV-2","GAATTGGAATTAAATA",4,71.7,9.86,-0.98,0.06,2.5,1.02,0,">1 nonsynonymous","N64K S129T L131C",3
"lib2","SARS-CoV-2","GAATTGGAATTACTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","N4V V103R L125P K199*",4
"lib2","SARS-CoV-2","GAATTGGCGGAGCCTT",5,131.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D98N K128C F167Q G196W",4
"lib2","SARS-CoV-2","GAATTGGGGCGCCAAA",6,278.05,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36Q F167R Q176A",3
"lib2","SARS-CoV-2","GAATTGGGGGGCAAAA",5,0.53,NA,NA,NA,NA,NA,NA,"stop","L5* C61* R78I",3
"lib2","SARS-CoV-2","GAATTGGTGTCCCCGC",9,156.72,10.02,-0.82,0.08,2.42,1.08,0,">1 nonsynonymous","A18F N58C",2
"lib2","SARS-CoV-2","GAATTGGTTTAAATAC",3,21.43,10.75,-0.09,0.08,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAATTGTACCCCTTCT",1,5.92,7.49,-3.34,0.71,2.08,1.01,0.08,">1 nonsynonymous","N58F I80F N107E",3
"lib2","SARS-CoV-2","GAATTGTGTAATCGAG",7,28.13,9.1,-1.73,0.1,2.32,1.1,0.01,">1 nonsynonymous","C6H S43L K56G V173P",4
"lib2","SARS-CoV-2","GAATTGTGTTCTATAG",3,36.99,10.69,-0.15,0.02,3,1.01,0,">1 nonsynonymous","G83M S200T",2
"lib2","SARS-CoV-2","GAATTGTTGATATGAG",11,90.77,9.01,-1.83,0.08,2.71,1.12,0,">1 nonsynonymous","S113C N130P L162V",3
"lib2","SARS-CoV-2","GAATTTAAAATTATCA",2,47.92,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","D34E G51T P177S T201Q",4
"lib2","SARS-CoV-2","GAATTTAAACTACAGG",4,154.43,10.22,-0.62,0.04,2.96,1.06,0,">1 nonsynonymous","N58S F156I T201L",3
"lib2","SARS-CoV-2","GAATTTAAATATATCC",1,2.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","GAATTTAATGCTTAAT",5,72.76,10.65,-0.18,0.04,2.91,1.1,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","GAATTTACACACCAGG",4,13.09,10.16,-0.67,0.27,2.43,1.16,0.02,">1 nonsynonymous","R27F S45R Q168T",3
"lib2","SARS-CoV-2","GAATTTACCATCTATC",5,86.88,9.43,-1.4,0.09,1.95,1.06,0,">1 nonsynonymous","Y35E L131V F160D",3
"lib2","SARS-CoV-2","GAATTTACGCTTAAAT",1,15.06,10.97,0.13,0.06,2.93,1.06,0,"1 nonsynonymous","R78K",1
"lib2","SARS-CoV-2","GAATTTACGGATAATA",8,115.4,10.62,-0.22,0.03,2.94,1.08,0,">1 nonsynonymous","T148C P197R",2
"lib2","SARS-CoV-2","GAATTTACGTGAGTTA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib2","SARS-CoV-2","GAATTTACTCTTAGGA",2,123.24,6.64,-4.2,0.2,1.5,1.12,0,">1 nonsynonymous","N120D Y143S L162F",3
"lib2","SARS-CoV-2","GAATTTACTTAAGGAT",5,5.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R D34N P96K",3
"lib2","SARS-CoV-2","GAATTTAGAATACGCC",11,42.11,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F12T A33C G86F A105Q N118V I142T G155C T170L",8
"lib2","SARS-CoV-2","GAATTTAGACATGTCT",18,91.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11H G166F",2
"lib2","SARS-CoV-2","GAATTTAGACTCATAA",3,23.85,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","E10A S53D G101N Q168C",4
"lib2","SARS-CoV-2","GAATTTAGGACTCCCT",5,0.95,NA,NA,NA,NA,NA,NA,"stop","N1* S36Y",2
"lib2","SARS-CoV-2","GAATTTAGTGTTAAAG",5,34.58,10.16,-0.67,0.07,2.75,1.15,0,">1 nonsynonymous","Y35S N110V",2
"lib2","SARS-CoV-2","GAATTTATACTTCACC",2,5.54,10.75,-0.08,0.1,2.85,1.16,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","GAATTTATATCACAAT",10,97.62,10.59,-0.24,0.05,2.91,1.08,0,">1 nonsynonymous","S43L F62H V115S",3
"lib2","SARS-CoV-2","GAATTTATCAACGGAA",1,18.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9L A89R",2
"lib2","SARS-CoV-2","GAATTTATGTAGTGCT",2,5.21,8.56,-2.28,0.28,2.54,1.14,0.03,">1 nonsynonymous","A33T N40G Y119C",3
"lib2","SARS-CoV-2","GAATTTATTAAGAACT",8,44.62,10.72,-0.11,0.1,2.77,1.24,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","GAATTTATTCGGGTGG",10,44.18,6.86,-3.98,0.21,1.5,1.14,0.01,">1 nonsynonymous","P82A G166K",2
"lib2","SARS-CoV-2","GAATTTCACTAAGGCA",5,121.93,9.5,-1.33,0.05,2.94,1.08,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","GAATTTCATAAGAAGC",1,74.75,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y66K V71R Q176T",3
"lib2","SARS-CoV-2","GAATTTCATGGTACTG",3,0.4,NA,NA,NA,NA,NA,NA,"stop","G9L R27* V37* L95R Y121L K198F",6
"lib2","SARS-CoV-2","GAATTTCCAAAAATAC",10,178.81,10.66,-0.18,0.03,2.87,1.08,0,"1 nonsynonymous","A42N",1
"lib2","SARS-CoV-2","GAATTTCCAGCCGAAT",1,45.54,9.23,-1.61,0.1,2.71,1.13,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","GAATTTCGTCTCGTAA",2,28.9,8.29,-2.54,0.13,2.34,1.1,0.01,">1 nonsynonymous","E10N Y39Q K56L Y119F E154L",5
"lib2","SARS-CoV-2","GAATTTCGTTAAACAA",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110L K128V",2
"lib2","SARS-CoV-2","GAATTTGAACGTTATC",11,275.37,9.29,-1.55,0.03,2.95,1.07,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","GAATTTGAGCAAAGGC",10,2.64,NA,NA,NA,NA,NA,NA,"stop","Y91Q T201*",2
"lib2","SARS-CoV-2","GAATTTGAGCATTGAA",5,115.89,10.69,-0.15,0.04,2.96,1.03,0,">1 nonsynonymous","P54V A81S",2
"lib2","SARS-CoV-2","GAATTTGAGCTAGCGA",7,26.01,8.23,-2.61,0.17,2.18,1.06,0.01,">1 nonsynonymous","N4L L60R R73M T170S",4
"lib2","SARS-CoV-2","GAATTTGATTAAATAA",4,51.9,8.37,-2.47,0.09,2.82,1.04,0,">1 nonsynonymous","N1E D97V N157K",3
"lib2","SARS-CoV-2","GAATTTGCTTATTCAA",9,1.47,NA,NA,NA,NA,NA,NA,"stop","T15G S43* K56Q T63Q D68S",5
"lib2","SARS-CoV-2","GAATTTGGAAATTGAA",5,10.71,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","A42T L60R G86L L183W",4
"lib2","SARS-CoV-2","GAATTTGGAACTTTTT",8,70.13,7.15,-3.69,0.3,1.5,1.24,0.02,">1 nonsynonymous","G116L A145M F185T",3
"lib2","SARS-CoV-2","GAATTTGTATAGTGGT",9,140.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G83H F167S",2
"lib2","SARS-CoV-2","GAATTTGTCTCCCCAG",8,95.86,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S19R C61T V77T N171K K199Q",5
"lib2","SARS-CoV-2","GAATTTGTGTTTGAAA",15,143.79,6.28,-4.56,0.45,1.5,1.18,0.01,">1 nonsynonymous","T63S P82K L95M",3
"lib2","SARS-CoV-2","GAATTTTAAAACAACA",4,30.37,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G101N Y119E",2
"lib2","SARS-CoV-2","GAATTTTATGTGCCTA",2,0.75,NA,NA,NA,NA,NA,NA,"stop","S19* A81T",2
"lib2","SARS-CoV-2","GAATTTTCCGTCCCAT",10,69.5,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V20W S41R K56N N92F S113M N157D",6
"lib2","SARS-CoV-2","GAATTTTGACCACTGA",2,12.71,10.33,-0.5,0.1,2.93,1,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","GAATTTTGCAGGCATT",4,16.82,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","K94V L131H",2
"lib2","SARS-CoV-2","GAATTTTTAGGGAGAG",4,0.87,NA,NA,NA,NA,NA,NA,"stop","D34A G174*",2
"lib2","SARS-CoV-2","GAATTTTTTCTCAAAT",6,12.04,6,-4.84,2,1.5,1.3,0.04,"1 nonsynonymous","L183E",1
"lib2","SARS-CoV-2","GACAAAAAAACTTGAA",1,1.71,NA,NA,NA,NA,NA,NA,"stop","S43F D97I V103* L122* L131K",5
"lib2","SARS-CoV-2","GACAAAAAAATAAAAC",2,32.79,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","C6L A105L S147Y",3
"lib2","SARS-CoV-2","GACAAAAACAAACCTA",3,2.36,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","GACAAAAACAGCCTGC",3,32.34,8.7,-2.14,0.12,2.43,1.03,0.01,">1 nonsynonymous","L57K F156H V173G",3
"lib2","SARS-CoV-2","GACAAAAACATTTACA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","V20E C49R D68* S113E K132V S184R T201P",7
"lib2","SARS-CoV-2","GACAAAAACTCCGTTA",6,147.58,8.4,-2.44,0.14,2.4,1.05,0.01,">1 nonsynonymous","G9T N40T K87D I104L G174R A192E",6
"lib2","SARS-CoV-2","GACAAAAAGAAGCTTA",3,94.91,10.79,-0.04,0.04,2.92,1.1,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","GACAAAAAGCCATACA",3,66.47,8.21,-2.62,0.37,1.5,1,0.05,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","GACAAAAATAACTAAA",3,77.57,10.79,-0.04,0.04,2.98,1.04,0,">1 nonsynonymous","R16C T55D",2
"lib2","SARS-CoV-2","GACAAAAATAATTTCA",2,11.77,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","F47M P82E Y93E G101L Y143V",5
"lib2","SARS-CoV-2","GACAAAAATGCAGTGC",5,76.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G51V N64F L95P Y123V",4
"lib2","SARS-CoV-2","GACAAAAATTTAAATA",1,38.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D90C W106R S139N H189F",4
"lib2","SARS-CoV-2","GACAAAAATTTTGGCG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103T",1
"lib2","SARS-CoV-2","GACAAAACAACATTAT",1,20.67,9.65,-1.18,0.13,2.32,1,0.01,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","GACAAAACAAGGAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","N64D W106* P133Y C150W",4
"lib2","SARS-CoV-2","GACAAAACAGAGGATA",1,10.05,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V11F S36H W106E V173D",4
"lib2","SARS-CoV-2","GACAAAACATAATAGT",12,321.68,10.63,-0.21,0.03,2.91,1.07,0,">1 nonsynonymous","K26A K56M",2
"lib2","SARS-CoV-2","GACAAAACATCGTTCC",7,105.42,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y91E S139H",2
"lib2","SARS-CoV-2","GACAAAACCCTCTTTC",5,113.38,9.85,-0.99,0.08,2.05,1.02,0,">1 nonsynonymous","E10L V65R",2
"lib2","SARS-CoV-2","GACAAAACCGTAATAG",3,19.64,10.01,-0.82,0.12,2.06,1.05,0.01,">1 nonsynonymous","W106L K128T",2
"lib2","SARS-CoV-2","GACAAAACCTATGCCA",3,32.28,10.71,-0.12,0.03,2.85,1.17,0,"1 nonsynonymous","T3G",1
"lib2","SARS-CoV-2","GACAAAACTAGTGGAT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G74L D112Q L131V E186S S200*",5
"lib2","SARS-CoV-2","GACAAAAGAGAATTAG",1,57.13,10.95,0.12,0.09,2.87,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GACAAAAGATGGTTTA",7,150.18,10.25,-0.59,0.04,2.83,1.05,0,">1 nonsynonymous","C31Y S41N",2
"lib2","SARS-CoV-2","GACAAAAGCCAACTTA",1,15.5,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y121T R179T",2
"lib2","SARS-CoV-2","GACAAAAGGAGCGTAT",6,141.49,10.85,0.01,0.06,2.92,1.08,0,">1 nonsynonymous","A42R D97L",2
"lib2","SARS-CoV-2","GACAAAAGGCTGTTAA",5,67.6,8.53,-2.3,0.11,1.62,1.09,0.01,">1 nonsynonymous","L5R S41R R136D",3
"lib2","SARS-CoV-2","GACAAAAGGTGCGAAT",6,20.35,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D112R P149L",2
"lib2","SARS-CoV-2","GACAAAAGTAGTAAAT",24,426.48,6,-4.84,1.48,1.5,1.18,0.01,">1 nonsynonymous","N40F Y165F Y178T",3
"lib2","SARS-CoV-2","GACAAAATAAAAAACA",6,100.1,10.82,-0.02,0.06,2.97,1.06,0,"1 nonsynonymous","Q84T",1
"lib2","SARS-CoV-2","GACAAAATACACCCGA",10,30.74,6,-4.84,1.96,2.48,1.23,0.01,">1 nonsynonymous","C49V L60P F62Q I104R",4
"lib2","SARS-CoV-2","GACAAAATGAAAGTAA",3,91.57,9.99,-0.84,0.06,2.84,1.08,0,">1 nonsynonymous","R78S K87M F99L",3
"lib2","SARS-CoV-2","GACAAAATGAGCGATA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","N13R A67N T85* S113R Y119E",5
"lib2","SARS-CoV-2","GACAAAATTAAATTGA",10,373,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","E10M S113Q Y121S",3
"lib2","SARS-CoV-2","GACAAAATTCACGGAT",3,59.7,10.77,-0.06,0.03,2.99,1.03,0,"1 nonsynonymous","T15P",1
"lib2","SARS-CoV-2","GACAAAATTGACGTAA",8,145.51,8.61,-2.23,0.1,1.84,1.08,0,">1 nonsynonymous","F12H S129E F156V",3
"lib2","SARS-CoV-2","GACAAACAAAAATCAG",13,145.7,10.56,-0.27,0.03,2.9,1.08,0,">1 nonsynonymous","F12M S200W",2
"lib2","SARS-CoV-2","GACAAACAAAGTTGGA",6,27.61,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","I2L V103R G174A",3
"lib2","SARS-CoV-2","GACAAACAATTATACA",4,669.76,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A105K R124V",2
"lib2","SARS-CoV-2","GACAAACACATGGAGT",8,101.64,10.9,0.07,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAAACACGCATAGC",2,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K L57S G86R P96S R179I",5
"lib2","SARS-CoV-2","GACAAACAGACTACTA",15,279.9,6,-4.84,1.9,1.5,1.18,0.01,">1 nonsynonymous","N4L V37D G51D P133R P149E",5
"lib2","SARS-CoV-2","GACAAACATGTATCAC",1,14.68,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","T55L L60Q I142L P161H",4
"lib2","SARS-CoV-2","GACAAACATTTCCCAG",3,35.25,9.81,-1.03,0.1,2.72,1.21,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","GACAAACCGAAATTGT",7,178.81,10.86,0.02,0.05,2.95,1.05,0,">1 nonsynonymous","N40E K48R",2
"lib2","SARS-CoV-2","GACAAACCGATTATTG",4,15.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y93P R127S C158R F167N",4
"lib2","SARS-CoV-2","GACAAACGCACTAAGG",15,206.15,10.42,-0.42,0.03,2.89,1.05,0,">1 nonsynonymous","L5I L38Y",2
"lib2","SARS-CoV-2","GACAAACTAAAGATCG",5,58.29,8.81,-2.03,0.12,1.74,1.14,0.01,">1 nonsynonymous","A105I S129L",2
"lib2","SARS-CoV-2","GACAAACTCAAAGCAC",19,2.43,NA,NA,NA,NA,NA,NA,"stop","V103* K198R",2
"lib2","SARS-CoV-2","GACAAACTGAATTCTC",6,57.68,10.66,-0.18,0.09,2.72,1.29,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","GACAAACTTGATATTC",3,43.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25F C61R N107I E141C",4
"lib2","SARS-CoV-2","GACAAAGAAAAGATAA",1,20.03,9.48,-1.36,0.13,1.88,1.09,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","GACAAAGAAAATCCCC",6,93.44,10.82,-0.02,0.06,2.88,1.14,0,">1 nonsynonymous","S36R T201L",2
"lib2","SARS-CoV-2","GACAAAGAATAATCAA",9,0.61,NA,NA,NA,NA,NA,NA,"stop","S19E D97*",2
"lib2","SARS-CoV-2","GACAAAGAATATCGTA",13,168.51,10.84,0.01,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GACAAAGATGAAAGAT",2,0.06,NA,NA,NA,NA,NA,NA,"stop","S45Q P54C K94G V103L P133*",5
"lib2","SARS-CoV-2","GACAAAGCATTTTAAA",9,104.85,9.4,-1.44,0.06,1.99,1.07,0,">1 nonsynonymous","C102V S139E",2
"lib2","SARS-CoV-2","GACAAAGCCGTCGCTG",5,16.22,7.46,-3.38,0.41,1.5,1,0.06,">1 nonsynonymous","D59W P82K D98W",3
"lib2","SARS-CoV-2","GACAAAGCGTTACACA",3,86.65,10.78,-0.05,0.04,2.91,1.11,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","GACAAAGCGTTAGATC",2,5.99,10.71,-0.13,0.11,2.65,1.4,0,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","GACAAAGGATTTCAAT",4,29.77,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14V Y35A L131K",3
"lib2","SARS-CoV-2","GACAAAGGGTAATACC",2,0,NA,NA,NA,NA,NA,NA,"stop","T55L T140N N157*",3
"lib2","SARS-CoV-2","GACAAAGGTATACACC",3,27.9,9.96,-0.87,0.08,2.64,1.03,0.01,">1 nonsynonymous","F12W K199I",2
"lib2","SARS-CoV-2","GACAAAGTAATAACCG",8,190.65,10.04,-0.8,0.06,2.58,1.07,0,">1 nonsynonymous","Y91H K128Y",2
"lib2","SARS-CoV-2","GACAAAGTATACTCTA",2,68.93,10.61,-0.23,0.05,2.87,1.07,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","GACAAAGTCCGCTGAC",4,16.27,10.82,-0.02,0.23,2.51,1,0.02,">1 nonsynonymous","N130W T201R",2
"lib2","SARS-CoV-2","GACAAAGTCTCCTTCT",3,63.95,10.46,-0.38,0.05,2.97,1.03,0,"1 nonsynonymous","G174Q",1
"lib2","SARS-CoV-2","GACAAAGTGGACTTCG",4,15.31,6,-4.84,1.49,1.5,1.22,0.03,">1 nonsynonymous","D68E Y119S",2
"lib2","SARS-CoV-2","GACAAAGTTTCACAAT",1,7.82,10.85,0.01,0.23,2.78,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACAAATAAAGTTCCA",10,66.2,9.57,-1.27,0.06,1.92,1.05,0,"1 nonsynonymous","R136D",1
"lib2","SARS-CoV-2","GACAAATAAATACATC",2,76.44,9.87,-0.97,0.08,2.44,1.03,0,">1 nonsynonymous","V20S N130V",2
"lib2","SARS-CoV-2","GACAAATAACATTGAT",1,21.95,10.83,0,0.05,2.88,1.13,0,">1 nonsynonymous","S36T L60V S147N",3
"lib2","SARS-CoV-2","GACAAATAAGCTTGTA",11,202.76,10.03,-0.81,0.05,2.71,1,0,">1 nonsynonymous","A33K T140L",2
"lib2","SARS-CoV-2","GACAAATAATCCCGAA",5,19.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63Q I80N W106R V115L G146T S184A",6
"lib2","SARS-CoV-2","GACAAATACAAGTCAG",9,149.73,9.37,-1.47,0.07,1.78,1.03,0,">1 nonsynonymous","A89R N130M",2
"lib2","SARS-CoV-2","GACAAATCAGTTTTTT",3,28.62,10.38,-0.46,0.06,2.97,1,0,"1 nonsynonymous","P7V",1
"lib2","SARS-CoV-2","GACAAATCTCGAACCT",8,97.02,8.38,-2.46,0.11,2.3,1.04,0,">1 nonsynonymous","S45P T100F G117F",3
"lib2","SARS-CoV-2","GACAAATGATCTATCA",1,9.87,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F12Q L125N C150A G166T",4
"lib2","SARS-CoV-2","GACAAATGCGAGCATA",1,13.09,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N118H A145D T170M",3
"lib2","SARS-CoV-2","GACAAATTATAATAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","G86* N107F F160N",3
"lib2","SARS-CoV-2","GACAAATTCAATCAGG",21,353.59,10.65,-0.19,0.02,2.96,1.03,0,"1 nonsynonymous","V182I",1
"lib2","SARS-CoV-2","GACAAATTCACGCCCT",6,2.86,NA,NA,NA,NA,NA,NA,"stop","D98* N151H",2
"lib2","SARS-CoV-2","GACAAATTGTTATAAA",13,46.57,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","R127W A145P A190V",3
"lib2","SARS-CoV-2","GACAACAAAAGTTTTG",1,30.57,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P161C Q176R",2
"lib2","SARS-CoV-2","GACAACAAAGGTCCCA",2,0.61,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib2","SARS-CoV-2","GACAACAAGGAACCCG",4,119.17,8.57,-2.26,0.09,1.99,1.12,0,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","GACAACAATACCCCAT",4,44.17,8.98,-1.85,0.1,2.13,1.01,0,">1 nonsynonymous","F8Y G83K S139C F160G",4
"lib2","SARS-CoV-2","GACAACAATAGATTTT",1,35.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6Y T63R D90T R124C K198V",5
"lib2","SARS-CoV-2","GACAACACAGCATCCA",4,8.29,NA,NA,NA,NA,NA,NA,"stop","V52* N171I",2
"lib2","SARS-CoV-2","GACAACACATCCCTTC",2,51.23,10.23,-0.6,0.12,2.49,1,0.01,">1 nonsynonymous","S41N C49T",2
"lib2","SARS-CoV-2","GACAACACGCTTTAAG",4,39.67,10.63,-0.21,0.09,2.8,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAACAGAGCCCTTA",10,37.83,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","A81T N107L",2
"lib2","SARS-CoV-2","GACAACAGGCTAAACG",12,99.45,10.36,-0.48,0.06,2.94,1.06,0,">1 nonsynonymous","E10M Y35V",2
"lib2","SARS-CoV-2","GACAACAGTTTAAATA",15,171.2,10.34,-0.5,0.03,2.92,1.08,0,">1 nonsynonymous","N4W K87F",2
"lib2","SARS-CoV-2","GACAACATTAATATAT",5,12.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70W",1
"lib2","SARS-CoV-2","GACAACCAATGTGGAC",1,18.85,9.44,-1.4,0.11,2.87,1.04,0.01,">1 nonsynonymous","I2P Y119M",2
"lib2","SARS-CoV-2","GACAACCACGACCATA",6,69,10.93,0.09,0.06,2.88,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GACAACCACTCGCATG",8,27.98,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44M C61S F156G P161H",4
"lib2","SARS-CoV-2","GACAACCAGGTGTGGA",3,23.38,10.55,-0.28,0.06,2.86,1.09,0,"1 nonsynonymous","D59P",1
"lib2","SARS-CoV-2","GACAACCATTCTTAAA",2,35.85,6.75,-4.09,0.27,1.5,1.11,0.01,">1 nonsynonymous","I28Q F62C P133Q",3
"lib2","SARS-CoV-2","GACAACCATTTATGGT",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F P54S Q176R",3
"lib2","SARS-CoV-2","GACAACCCTTTATAAA",8,63.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y39I D59E V103S N171K",4
"lib2","SARS-CoV-2","GACAACCGCTAAAAAA",3,70.98,10.92,0.09,0.07,2.98,1.04,0,"1 nonsynonymous","S36E",1
"lib2","SARS-CoV-2","GACAACCTATATCCAC",5,6.12,6.68,-4.16,0.75,1.84,1.29,0.02,">1 nonsynonymous","N1P N64S V77A T100M N130A S139Y G146F",7
"lib2","SARS-CoV-2","GACAACCTCGTTTTCA",8,102.45,9.13,-1.7,0.04,2.97,1.07,0,"1 nonsynonymous","G117E",1
"lib2","SARS-CoV-2","GACAACGATATAGAAG",3,26.57,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9I R25V Q84M D112S",4
"lib2","SARS-CoV-2","GACAACGCCAGTTTAA",7,5.4,NA,NA,NA,NA,NA,NA,"stop","T63* C102M",2
"lib2","SARS-CoV-2","GACAACGCTGAAACTA",3,48.01,10.84,0,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAACGCTGACAATA",2,13.7,8.65,-2.19,0.37,1.69,1,0.06,">1 nonsynonymous","N13H C61R K114G S129I",4
"lib2","SARS-CoV-2","GACAACGCTTTATAAG",3,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93V N151D F156M",3
"lib2","SARS-CoV-2","GACAACGGCTAATACT",10,121.31,7.14,-3.69,0.18,1.5,1.14,0.01,">1 nonsynonymous","P7E G86L",2
"lib2","SARS-CoV-2","GACAACGGGCATCACT",11,164.52,7.81,-3.03,0.25,1.5,1.1,0.02,">1 nonsynonymous","Y35R S108C K128S S184V K198L",5
"lib2","SARS-CoV-2","GACAACGGGTACTTCA",3,10.97,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","N107T P149H L183Y T201D",4
"lib2","SARS-CoV-2","GACAACTACAACACAT",4,21.35,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A18T S36I K48E V77D G83C R136W",6
"lib2","SARS-CoV-2","GACAACTAGAAGTACA",5,48.77,10.14,-0.69,0.05,2.3,1.07,0,">1 nonsynonymous","V37W P82L F160Y",3
"lib2","SARS-CoV-2","GACAACTATATTAATA",3,81.12,9.66,-1.17,0.07,2.79,1,0,">1 nonsynonymous","D90I K114S S129G F156P",4
"lib2","SARS-CoV-2","GACAACTATCAAAGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2P K56L G86P N107V R136* G166C",6
"lib2","SARS-CoV-2","GACAACTCAAACACCC",3,22.41,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","S41W G86L N120D R124A T201S",5
"lib2","SARS-CoV-2","GACAACTCACCCGACA",4,0,NA,NA,NA,NA,NA,NA,"stop","G83F P96L N107* C150G",4
"lib2","SARS-CoV-2","GACAACTCCATAAATA",2,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71P N107L S147W E186L",4
"lib2","SARS-CoV-2","GACAACTCCATTCTTA",2,3.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V E154V E186I",3
"lib2","SARS-CoV-2","GACAACTCGACATCTC",9,80.77,6,-4.84,2,3,1.25,0,">1 nonsynonymous","W106P D112G N130P S139W Y165D",5
"lib2","SARS-CoV-2","GACAACTCGGTTAACA",5,1.08,NA,NA,NA,NA,NA,NA,"stop","L5* R25P N64V T148G",4
"lib2","SARS-CoV-2","GACAACTGAGTCACCC",10,113.18,10.66,-0.17,0.03,2.89,1.11,0,">1 nonsynonymous","T15S L60A L122V V153A",4
"lib2","SARS-CoV-2","GACAACTGCACCAAAA",6,60.46,9.64,-1.2,0.14,2.33,1.03,0.01,">1 nonsynonymous","L38H S43I",2
"lib2","SARS-CoV-2","GACAAGAAACTAATCT",9,196.08,10.58,-0.26,0.03,2.91,1.07,0,"1 nonsynonymous","A42C",1
"lib2","SARS-CoV-2","GACAAGAAAGTACTTT",4,46.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N92L N157R P197Q",3
"lib2","SARS-CoV-2","GACAAGAACAAACGAC",11,39.77,8.99,-1.84,0.14,2.52,1.13,0.01,">1 nonsynonymous","T85A I142R",2
"lib2","SARS-CoV-2","GACAAGAACATACAAA",3,110.13,11.12,0.28,0.04,2.91,1.1,0,"1 nonsynonymous","Y123F",1
"lib2","SARS-CoV-2","GACAAGAATGAACCAG",2,0.9,NA,NA,NA,NA,NA,NA,"stop","T3C A14* V65* N151I",4
"lib2","SARS-CoV-2","GACAAGAATTAAAAAG",6,0.14,NA,NA,NA,NA,NA,NA,"stop","F44P Y119*",2
"lib2","SARS-CoV-2","GACAAGAATTATAGAC",3,43.95,10.52,-0.32,0.13,2.77,1.06,0.01,">1 nonsynonymous","T15N Y39P",2
"lib2","SARS-CoV-2","GACAAGACCACCCCCA",3,12.13,6,-4.84,2,3,1.28,0.03,">1 nonsynonymous","P7M A14V V71S",3
"lib2","SARS-CoV-2","GACAAGAGGACAGTGT",1,21.49,8.64,-2.2,0.15,1.93,1.09,0.01,">1 nonsynonymous","L5K F126H T148L V180A",4
"lib2","SARS-CoV-2","GACAAGAGTTGAAAGG",3,20.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K F44L F70L",3
"lib2","SARS-CoV-2","GACAAGATGACCGTCA",1,4.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","GACAAGCACAAGGCCA",7,23.51,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T15L C49M N157S V173C",4
"lib2","SARS-CoV-2","GACAAGCACCAACTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6P R16* S41L D59W T100F D112G E135C",7
"lib2","SARS-CoV-2","GACAAGCAGAAGCTAA",5,21.39,7.04,-3.79,0.38,1.5,1.02,0.04,">1 nonsynonymous","I80K K128D N157L",3
"lib2","SARS-CoV-2","GACAAGCCACCAATTA",3,13.25,10.76,-0.08,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAAGCCTCAAATTC",2,32.83,9.69,-1.15,0.17,1.78,1.1,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","GACAAGCTCGAGGCTT",12,177.39,10.39,-0.45,0.04,2.88,1.04,0,">1 nonsynonymous","S36W E141F",2
"lib2","SARS-CoV-2","GACAAGCTTTTAGTAA",3,2.88,NA,NA,NA,NA,NA,NA,"stop","Y35* S45W",2
"lib2","SARS-CoV-2","GACAAGGAACACCACA",6,2.34,NA,NA,NA,NA,NA,NA,"stop","V71L Y91V F99N G146E G166*",5
"lib2","SARS-CoV-2","GACAAGGCACGTAGAC",4,45.78,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R27W N92L W106T R127T R136A",5
"lib2","SARS-CoV-2","GACAAGGCTCACACTA",4,56.89,9.16,-1.67,0.07,1.79,1.08,0,"1 nonsynonymous","S69E",1
"lib2","SARS-CoV-2","GACAAGGCTGAATAAT",8,1.84,NA,NA,NA,NA,NA,NA,"stop","E10* F126K E135I S139I",4
"lib2","SARS-CoV-2","GACAAGGGAATGATTA",3,36.34,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T85K G86R",2
"lib2","SARS-CoV-2","GACAAGGGTGAACTTT",4,37.38,9.03,-1.8,0.14,1.72,1.06,0.01,">1 nonsynonymous","I2T T46P N64R",3
"lib2","SARS-CoV-2","GACAAGGTAGAGCTAA",3,78.07,10.84,0.01,0.06,2.88,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAAGGTATAGATGC",4,57.81,10.87,0.03,0.03,2.97,1.05,0,"1 nonsynonymous","T140A",1
"lib2","SARS-CoV-2","GACAAGTATACAGGAC",3,1.9,NA,NA,NA,NA,NA,NA,"stop","S41* K56A T63V",3
"lib2","SARS-CoV-2","GACAAGTATACGTAAA",1,2.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","GACAAGTCACATAAGT",4,88.46,10.88,0.04,0.06,2.98,1.03,0,">1 nonsynonymous","I2F Q163S L187M",3
"lib2","SARS-CoV-2","GACAAGTCTACGCATA",2,7.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S V52L N107S",3
"lib2","SARS-CoV-2","GACAAGTGCACACTCG",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11Q N118I P191Y",3
"lib2","SARS-CoV-2","GACAAGTGTTATTACG",3,14.8,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F44N C102G S108P",3
"lib2","SARS-CoV-2","GACAAGTTAAGAACAT",15,154.35,8.09,-2.75,0.13,1.82,1.1,0.01,">1 nonsynonymous","N1G S113Y Y119K",3
"lib2","SARS-CoV-2","GACAAGTTACCCAGTG",5,172.19,10.5,-0.34,0.04,2.93,1.07,0,">1 nonsynonymous","N64W G83F",2
"lib2","SARS-CoV-2","GACAAGTTGAACACGA",4,1,NA,NA,NA,NA,NA,NA,"stop","T15C I104M K128W Y143* P149F",5
"lib2","SARS-CoV-2","GACAATAAAAATATCG",5,91.61,9.98,-0.86,0.05,2.67,1.05,0,">1 nonsynonymous","N107P E141V",2
"lib2","SARS-CoV-2","GACAATAAATCAGCAG",6,89.75,8.48,-2.36,0.12,1.91,1.09,0.01,">1 nonsynonymous","N13T F156K Y178L",3
"lib2","SARS-CoV-2","GACAATAACAATCTAC",23,203.4,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F44K I88T N107L F134S",4
"lib2","SARS-CoV-2","GACAATAACCATCCTT",4,1.3,NA,NA,NA,NA,NA,NA,"stop","V11L T55V T100* E135G",4
"lib2","SARS-CoV-2","GACAATAACGAATGAC",18,117.72,10.77,-0.06,0.02,2.99,1.01,0,">1 nonsynonymous","D97H E135Q",2
"lib2","SARS-CoV-2","GACAATAAGAACTGTG",14,103.92,9.24,-1.59,0.11,1.81,1.04,0.01,">1 nonsynonymous","K94R N107T",2
"lib2","SARS-CoV-2","GACAATAAGATCTCAT",3,45.72,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F44M C49F L57S Y91V",4
"lib2","SARS-CoV-2","GACAATAAGCTAAGCT",1,29.31,10.85,0.01,0.05,3,1.03,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","GACAATAATCATAAGG",3,26.26,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R16Y G74L Y91E Y165L",4
"lib2","SARS-CoV-2","GACAATACAATAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V T63E V71N",3
"lib2","SARS-CoV-2","GACAATACATGTCCAT",4,159.47,10.17,-0.67,0.04,2.73,1.01,0,">1 nonsynonymous","N40M G152L",2
"lib2","SARS-CoV-2","GACAATAGCAGGTCTT",5,33.3,11.24,0.4,0.04,3,1,0,">1 nonsynonymous","I28W S129I N171Y",3
"lib2","SARS-CoV-2","GACAATAGCGACCCAT",4,18.49,10.43,-0.41,0.06,2.89,1,0,">1 nonsynonymous","W106M V173L",2
"lib2","SARS-CoV-2","GACAATAGCTGATATA",3,57.67,10.69,-0.15,0.08,2.78,1.2,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","GACAATAGTAACGTAT",4,10.92,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","V11D V182Q",2
"lib2","SARS-CoV-2","GACAATAGTTAAGTAT",9,147.28,8.85,-1.98,0.15,1.62,1.15,0.01,">1 nonsynonymous","N4R V11R T46I",3
"lib2","SARS-CoV-2","GACAATATAGAATATT",17,183.84,10.83,-0.01,0.04,2.9,1.11,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","GACAATATCAGGATGA",1,54.78,10.24,-0.6,0.04,2.9,1.05,0,">1 nonsynonymous","G51S V115E A192M",3
"lib2","SARS-CoV-2","GACAATATGATCTTTA",4,37.2,10.86,0.02,0.07,2.86,1.12,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","GACAATATGTATCTAC",14,178.79,10.38,-0.46,0.04,2.86,1.11,0,">1 nonsynonymous","Y35L E186L",2
"lib2","SARS-CoV-2","GACAATATGTCGAGCA",3,24.9,10.45,-0.38,0.06,3,1.01,0,">1 nonsynonymous","I2V G174K",2
"lib2","SARS-CoV-2","GACAATATTATCTTAT",5,75.77,10.75,-0.08,0.03,2.97,1.03,0,"1 nonsynonymous","A190M",1
"lib2","SARS-CoV-2","GACAATATTGTAACTC",11,100.72,7.13,-3.71,0.18,1.5,1.17,0.01,">1 nonsynonymous","T3M N107C G166E",3
"lib2","SARS-CoV-2","GACAATCACCGGGAAT",6,143.71,9.91,-0.92,0.06,2.21,1.07,0,">1 nonsynonymous","L38T G146S",2
"lib2","SARS-CoV-2","GACAATCACGTACAAT",5,76.78,10.28,-0.55,0.04,2.9,1.08,0,">1 nonsynonymous","E10V N58K",2
"lib2","SARS-CoV-2","GACAATCACTGTAACT",4,43.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F47A L60T N118Y N151L",4
"lib2","SARS-CoV-2","GACAATCATCGCAGAT",4,20.84,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","E10Q V20A W23F F44S W106T",5
"lib2","SARS-CoV-2","GACAATCCAGGCCTGT",3,20.83,8.99,-1.84,0.09,3,1,0,"1 nonsynonymous","T170V",1
"lib2","SARS-CoV-2","GACAATCCCAGTCAAG",3,82.35,10.82,-0.02,0.06,2.91,1.07,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GACAATCCTGAGCCGG",1,22.47,6,-4.84,2,3,1.05,0,">1 nonsynonymous","L38R N58M A81L G166T G174V",5
"lib2","SARS-CoV-2","GACAATCCTTCAAAAT",4,34.38,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2C A81T K94I E141D E154Q P161Q",6
"lib2","SARS-CoV-2","GACAATCCTTCACACT",3,65.46,10.6,-0.24,0.06,2.95,1.06,0,">1 nonsynonymous","F44L S184T",2
"lib2","SARS-CoV-2","GACAATCGAATGATAT",3,52.51,9.24,-1.59,0.09,2.3,1.02,0,">1 nonsynonymous","V11C P169S",2
"lib2","SARS-CoV-2","GACAATCGAGATATTT",7,97.43,10.63,-0.2,0.04,2.94,1.06,0,"1 nonsynonymous","K128F",1
"lib2","SARS-CoV-2","GACAATCGGTGTACAC",5,101.61,9.24,-1.59,0.07,2.83,1.15,0,">1 nonsynonymous","N118S T148C",2
"lib2","SARS-CoV-2","GACAATCTCAAAACCT",2,28.09,9.77,-1.07,0.12,1.99,1.05,0.01,">1 nonsynonymous","F99H P149S",2
"lib2","SARS-CoV-2","GACAATCTCCCCCATT",6,44.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12L F62D D68L",3
"lib2","SARS-CoV-2","GACAATCTTAATCCAC",2,6.92,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","L57F E76S G86L K94S",4
"lib2","SARS-CoV-2","GACAATGAAAAATCGA",7,120.45,10.12,-0.72,0.05,2.67,1.02,0,">1 nonsynonymous","S43G S139T F167Y",3
"lib2","SARS-CoV-2","GACAATGATCATATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21G W106S L183F",3
"lib2","SARS-CoV-2","GACAATGATCCAATGT",7,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L S19K D34M N64L A89D T148L",6
"lib2","SARS-CoV-2","GACAATGCTACGAAAA",2,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167S Y175N",2
"lib2","SARS-CoV-2","GACAATGGTACCAACC",4,1.64,NA,NA,NA,NA,NA,NA,"stop","A22D A89Y N157* S200T",4
"lib2","SARS-CoV-2","GACAATGTACTAACTT",12,5.23,NA,NA,NA,NA,NA,NA,"stop","W23S G86Y R127L G172Y K198*",5
"lib2","SARS-CoV-2","GACAATGTATAAAGAA",4,24.15,10.86,0.03,0.05,2.77,1.22,0,">1 nonsynonymous","S147T Q163V V173K G174W",4
"lib2","SARS-CoV-2","GACAATGTCTTACTAT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","F62M P82*",2
"lib2","SARS-CoV-2","GACAATTAAATTTTAA",2,9.25,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","T3E V65T W106V G155F",4
"lib2","SARS-CoV-2","GACAATTACGAATTGA",2,17.36,6.06,-4.78,0.69,1.5,1.16,0.01,">1 nonsynonymous","C49F D90Y Y119R",3
"lib2","SARS-CoV-2","GACAATTCCACATTAG",2,29.36,9.46,-1.37,0.13,1.98,1.04,0.01,">1 nonsynonymous","E10R F62T L122E E135S",4
"lib2","SARS-CoV-2","GACAATTCGGCACGGA",3,18.8,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I80S Y143P",2
"lib2","SARS-CoV-2","GACAATTGTCATGTTC",10,114.54,9.6,-1.24,0.08,2.18,1.05,0,">1 nonsynonymous","E10P N58L G116T",3
"lib2","SARS-CoV-2","GACAATTGTTATTGAA",5,42.02,6.67,-4.17,0.38,1.5,1.16,0.02,">1 nonsynonymous","T63A N107H D137Q",3
"lib2","SARS-CoV-2","GACAATTTACGAACGC",8,12.97,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","F99N F156H",2
"lib2","SARS-CoV-2","GACAATTTATACGTAT",1,26.44,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R16Y I72L L95R Y119L",4
"lib2","SARS-CoV-2","GACAATTTATACTCTA",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E D112Y Y123M K128Y E154L Y175S",6
"lib2","SARS-CoV-2","GACAATTTTATCAGGC",6,9.33,10.62,-0.21,0.08,2.49,1.5,0.01,">1 nonsynonymous","T63G S200P",2
"lib2","SARS-CoV-2","GACACAAAAAATAGAG",7,25.52,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T55V R78A D98N V103G C150R P161T F167W",7
"lib2","SARS-CoV-2","GACACAAACAAGACAT",3,22.88,10.96,0.13,0.08,2.81,1.13,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","GACACAAACCAGATAA",2,21.14,9.58,-1.26,0.1,1.96,1.06,0.01,"1 nonsynonymous","D137H",1
"lib2","SARS-CoV-2","GACACAAAGAATGCTT",2,30.39,10.45,-0.39,0.06,2.94,1.07,0,">1 nonsynonymous","T15A L122S G166A",3
"lib2","SARS-CoV-2","GACACAAAGCCTATCT",12,246.24,10.44,-0.39,0.03,2.9,1.06,0,">1 nonsynonymous","G83M E141L",2
"lib2","SARS-CoV-2","GACACAAATCCACATC",2,12.43,10.18,-0.65,0.12,2.93,1,0,">1 nonsynonymous","P149R G174W",2
"lib2","SARS-CoV-2","GACACAAATGGATGCT",5,88.37,10.5,-0.34,0.04,2.86,1.07,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","GACACAACATAATATA",6,10.81,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3G V11T T46S F99K P161T G166A H189I",7
"lib2","SARS-CoV-2","GACACAACCACCGCGA",5,99.89,10.38,-0.46,0.04,2.94,1.04,0,">1 nonsynonymous","L125A F160H H189T",3
"lib2","SARS-CoV-2","GACACAACGAATCATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A G172Q",2
"lib2","SARS-CoV-2","GACACAACGTAAACGT",6,0,NA,NA,NA,NA,NA,NA,"stop","T15* A67I A81T L122I S139F P149L",6
"lib2","SARS-CoV-2","GACACAACTAAAACGT",8,67.72,9.82,-1.01,0.04,2.98,1,0,">1 nonsynonymous","G9M S113G",2
"lib2","SARS-CoV-2","GACACAAGAAATAATT",9,76.53,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A33Q Y121N R127E",3
"lib2","SARS-CoV-2","GACACAAGAGTTCCGA",5,10.54,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F12I D34Y V103N R127I Q163K",5
"lib2","SARS-CoV-2","GACACAATACTGAGAT",6,41.36,10.76,-0.08,0.07,2.94,1.09,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","GACACAATAGTTTTAA",11,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144V P149S",2
"lib2","SARS-CoV-2","GACACAATATTCAAAC",11,2.58,NA,NA,NA,NA,NA,NA,"stop","I28*",1
"lib2","SARS-CoV-2","GACACAATCTCCCAAG",9,5.16,NA,NA,NA,NA,NA,NA,"stop","F8R Y91* N157K",3
"lib2","SARS-CoV-2","GACACAATCTGACCAA",1,21.82,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V37D V180G",2
"lib2","SARS-CoV-2","GACACAATGTGTTAGT",5,51.08,10.49,-0.34,0.05,2.91,1.06,0,">1 nonsynonymous","F12L Q168A",2
"lib2","SARS-CoV-2","GACACAATTCCTCGTT",12,111.59,10.1,-0.74,0.04,2.56,1.05,0,">1 nonsynonymous","L5Q N40S K48F",3
"lib2","SARS-CoV-2","GACACACAATACCAAA",1,6.98,6,-4.84,2,2.56,1.29,0.02,">1 nonsynonymous","S29N K56E L60Q I88Q",4
"lib2","SARS-CoV-2","GACACACACAGTTGGA",12,155.51,10.41,-0.43,0.04,2.94,1.05,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","GACACACACTCAAAAG",1,13.64,10.74,-0.1,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GACACACATACGCTGA",3,38.98,10.16,-0.68,0.04,2.72,1.1,0,">1 nonsynonymous","T15D S53L I104W",3
"lib2","SARS-CoV-2","GACACACATCTCCCTT",7,146.22,8.74,-2.1,0.07,1.75,1.06,0,">1 nonsynonymous","Q79K L131F A190E",3
"lib2","SARS-CoV-2","GACACACCAAAGACGG",8,68.81,10.4,-0.43,0.05,2.9,1.06,0,">1 nonsynonymous","R16C Q144K",2
"lib2","SARS-CoV-2","GACACACCATAAGACT",5,0.04,NA,NA,NA,NA,NA,NA,"stop","D34* F44I C61S D97Y P149A",5
"lib2","SARS-CoV-2","GACACACCTAACGCGC",7,64.56,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L95P N110H Y121D",3
"lib2","SARS-CoV-2","GACACACCTACTTGGG",5,119.43,10.73,-0.1,0.05,2.89,1.11,0,">1 nonsynonymous","S43L D97V",2
"lib2","SARS-CoV-2","GACACACCTGATTTAG",1,40.09,10.7,-0.14,0.06,2.99,1,0,">1 nonsynonymous","Y35L D97V N110F",3
"lib2","SARS-CoV-2","GACACACGAGGTTAAA",1,8.52,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L5V D68K D98E C150Q V173I",5
"lib2","SARS-CoV-2","GACACACGCATTCCAG",9,137.79,10.49,-0.34,0.03,2.92,1.07,0,"1 nonsynonymous","G116I",1
"lib2","SARS-CoV-2","GACACACGGAACACAA",9,156.29,8.05,-2.79,0.13,2.41,1.09,0.01,">1 nonsynonymous","S43N G74D",2
"lib2","SARS-CoV-2","GACACACGGCATATGA",4,40.85,10.33,-0.5,0.07,2.72,1,0,">1 nonsynonymous","F134S F185L",2
"lib2","SARS-CoV-2","GACACACTAAAAACTA",15,164.34,10.85,0.01,0.07,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GACACAGAAGTCTGGT",4,1109.99,10.07,-0.76,0.03,2.83,1.02,0,">1 nonsynonymous","C6H S129G K199A",3
"lib2","SARS-CoV-2","GACACAGAATACATCT",3,1.83,NA,NA,NA,NA,NA,NA,"stop","S45W I88M F99* F160P",4
"lib2","SARS-CoV-2","GACACAGAGTAAAATT",3,54.4,8.49,-2.34,0.1,2.36,1.08,0,">1 nonsynonymous","G146V G166S",2
"lib2","SARS-CoV-2","GACACAGATAAACTAC",9,49.73,6,-4.84,0.91,1.5,1.24,0.01,">1 nonsynonymous","C6W T15P W23S K48F N118M K198E",6
"lib2","SARS-CoV-2","GACACAGCATTTTGGG",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63E T201I",2
"lib2","SARS-CoV-2","GACACAGCCAGATACG",6,2.14,NA,NA,NA,NA,NA,NA,"stop","F8* G117V T201K",3
"lib2","SARS-CoV-2","GACACAGCGGCAATAA",9,3.4,NA,NA,NA,NA,NA,NA,"stop","C61G P96L R127Q T201*",4
"lib2","SARS-CoV-2","GACACAGGACCTTATC",3,16.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14C V77D Y175S",3
"lib2","SARS-CoV-2","GACACAGGATACCGGA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40C D90F T100H W106S Q144R",5
"lib2","SARS-CoV-2","GACACAGGTAGTAATA",5,21.88,9.77,-1.06,0.12,2.38,1.01,0.01,">1 nonsynonymous","A89C G152F",2
"lib2","SARS-CoV-2","GACACAGTAACCCTCT",7,239.06,10.81,-0.03,0.04,2.94,1.06,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","GACACATAAAGACGTT",5,88.03,9.28,-1.55,0.07,2.19,1.05,0,">1 nonsynonymous","L57R K87N S164C T201Y",4
"lib2","SARS-CoV-2","GACACATAAGATGTTG",8,26.84,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","V77I I104E S139I",3
"lib2","SARS-CoV-2","GACACATAATGCCCAG",16,203.06,8.73,-2.1,0.07,2.1,1.12,0,">1 nonsynonymous","S41A D59Y A81G E141M F156L",5
"lib2","SARS-CoV-2","GACACATAGCAAAATG",3,32.06,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","P7D C61L P82N N171R A192V",5
"lib2","SARS-CoV-2","GACACATATAGATGAT",5,2.64,NA,NA,NA,NA,NA,NA,"stop","F12I Y66C Y121H T148K V173*",5
"lib2","SARS-CoV-2","GACACATCAAAACGAA",1,61.47,10.76,-0.07,0.06,2.95,1.07,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","GACACATCATAAAACA",4,96.95,10.8,-0.04,0.04,2.93,1.08,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","GACACATCTACGTAGT",5,1.08,NA,NA,NA,NA,NA,NA,"stop","L5V L57K F99*",3
"lib2","SARS-CoV-2","GACACATCTCAAAAAT",2,25.39,10.26,-0.58,0.06,2.92,1.03,0,">1 nonsynonymous","N58L A190V",2
"lib2","SARS-CoV-2","GACACATGTGCTCATA",3,86.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59L G86N Y91G D98M L122R R136N G174S",7
"lib2","SARS-CoV-2","GACACATGTTTTTAAG",2,29.31,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D75Y G86I L122S T201S",4
"lib2","SARS-CoV-2","GACACATTGTAGAAAC",2,5.08,9.72,-1.12,0.41,2.11,1,0.04,">1 nonsynonymous","S41K D59N F99L K199L",4
"lib2","SARS-CoV-2","GACACCAAGAAAGGAT",3,16.02,9.13,-1.7,0.09,2.9,1.07,0.01,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","GACACCACAAGACACA",4,11.47,6,-4.84,2,3,1.16,0.01,"1 nonsynonymous","Y93H",1
"lib2","SARS-CoV-2","GACACCACCTCACTGT",6,55.47,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D90P P149H L162E",3
"lib2","SARS-CoV-2","GACACCACGCACAAAG",7,124.16,10.7,-0.14,0.05,2.91,1.1,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","GACACCAGGCCATTAT",4,7.75,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","A18P L95W",2
"lib2","SARS-CoV-2","GACACCAGTCAGCTAA",6,70.75,8.81,-2.03,0.08,2.81,1.08,0,">1 nonsynonymous","Y39A Y143T K198M",3
"lib2","SARS-CoV-2","GACACCATAATTAAGT",3,0.76,NA,NA,NA,NA,NA,NA,"stop","G83* R136V",2
"lib2","SARS-CoV-2","GACACCATCCCAACAG",3,40.5,8.35,-2.48,0.19,2.12,1.02,0.01,">1 nonsynonymous","R27E S36C I80V Y119N",4
"lib2","SARS-CoV-2","GACACCCAACGCATAT",10,49.18,8.97,-1.86,0.15,1.66,1.07,0.01,"1 nonsynonymous","V20G",1
"lib2","SARS-CoV-2","GACACCCACGGACCAT",3,60.04,9.9,-0.94,0.09,2.03,1.03,0,">1 nonsynonymous","V65K L162I",2
"lib2","SARS-CoV-2","GACACCCTATTCATAC",4,37.73,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V11D D34Q K56S D98S S139V",5
"lib2","SARS-CoV-2","GACACCCTCTCTCACT",3,86.83,9.31,-1.52,0.07,2.26,1.08,0,">1 nonsynonymous","D90R P161S",2
"lib2","SARS-CoV-2","GACACCCTGATACTAT",9,2.85,NA,NA,NA,NA,NA,NA,"stop","R27* K94S D98M S129D",4
"lib2","SARS-CoV-2","GACACCGACCGCCTCG",23,191.76,6.12,-4.72,1,1.5,1.24,0.03,">1 nonsynonymous","P82I D90L S147I",3
"lib2","SARS-CoV-2","GACACCGAGGTACCTA",3,5.18,6,-4.84,0.66,3,1,0,">1 nonsynonymous","D112H C158V S200G",3
"lib2","SARS-CoV-2","GACACCGCATAGCCAT",13,280.15,10.23,-0.61,0.03,2.78,1.08,0,"1 nonsynonymous","P133H",1
"lib2","SARS-CoV-2","GACACCGGCATTATTT",1,1.18,NA,NA,NA,NA,NA,NA,"stop","N40T Y119* C158R F185T",4
"lib2","SARS-CoV-2","GACACCTAGCGATGCG",2,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P S19V F70V P96F K114V F156W",6
"lib2","SARS-CoV-2","GACACCTATGGCACGC",20,1.23,NA,NA,NA,NA,NA,NA,"stop","V37* C61D",2
"lib2","SARS-CoV-2","GACACCTCAATAGATA",3,45.73,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I88N L95R L122S",3
"lib2","SARS-CoV-2","GACACCTCTTTAACAC",1,41.4,10.15,-0.68,0.09,2.51,1.01,0,">1 nonsynonymous","S36R K56H I104V N109K N120L",5
"lib2","SARS-CoV-2","GACACCTGGAGGACTA",5,12.55,8.67,-2.16,0.22,1.86,1.05,0.01,"1 nonsynonymous","V77W",1
"lib2","SARS-CoV-2","GACACCTTAAAACGTT",1,9.27,10.83,-0.01,0.14,2.8,1.03,0.01,">1 nonsynonymous","I2C S43R",2
"lib2","SARS-CoV-2","GACACCTTGCTTACAT",13,201.71,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","I2F I28P I142K Y165R",4
"lib2","SARS-CoV-2","GACACCTTGGCTGAAA",7,30.44,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","A14L G117Y C158S K199Y",4
"lib2","SARS-CoV-2","GACACGAAATTAGATC",3,69.24,10.32,-0.52,0.06,2.8,1.04,0,">1 nonsynonymous","S41L P191L",2
"lib2","SARS-CoV-2","GACACGAAGATTAATT",6,167.05,10.34,-0.49,0.04,2.91,1.09,0,">1 nonsynonymous","G9K Y121L",2
"lib2","SARS-CoV-2","GACACGACGTAAAGTA",8,108.08,10.73,-0.11,0.05,2.91,1.11,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","GACACGACTAACGAAA",2,47.07,10.51,-0.32,0.05,2.99,1.03,0,">1 nonsynonymous","N40S C61Y L188M",3
"lib2","SARS-CoV-2","GACACGACTAATAATT",3,82.92,9.25,-1.58,0.07,2.82,1.11,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","GACACGAGACTTACCT",2,9.14,8.85,-1.98,0.2,2.13,1,0.01,">1 nonsynonymous","T15M G83L D90C K132L",4
"lib2","SARS-CoV-2","GACACGAGGAGAATAC",2,49.23,10.37,-0.47,0.06,2.77,1.19,0,"1 nonsynonymous","V71L",1
"lib2","SARS-CoV-2","GACACGCAAATCAAAT",8,71.86,8.34,-2.5,0.13,2.16,1.11,0.01,">1 nonsynonymous","S129G T140M G146V",3
"lib2","SARS-CoV-2","GACACGCCAAAAAATT",3,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99N A190L",2
"lib2","SARS-CoV-2","GACACGCGACGTAATT",7,34.26,10.34,-0.5,0.06,2.95,1.03,0,"1 nonsynonymous","A14H",1
"lib2","SARS-CoV-2","GACACGCGAGATGCGC",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N C61R E141A Y165I T201W",5
"lib2","SARS-CoV-2","GACACGCTACCCATAA",6,67.07,10.78,-0.06,0.05,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GACACGCTATTCCAAA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","R16C I104* S200F",3
"lib2","SARS-CoV-2","GACACGGAAATTCCGG",5,104.47,10.83,-0.01,0.06,2.99,1.01,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","GACACGGAGTCCTTCT",6,93.96,10.2,-0.64,0.06,2.76,1.03,0,">1 nonsynonymous","G9S S69N F160S",3
"lib2","SARS-CoV-2","GACACGGCACCGAACT",28,985.1,10.79,-0.05,0.04,2.91,1.1,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","GACACGGCCGATGCAG",10,43.94,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F70M K87V W106G G116S S129A",5
"lib2","SARS-CoV-2","GACACGGGTCATAGGA",3,71.29,9.93,-0.91,0.1,2.28,1.08,0,">1 nonsynonymous","T3Y G9R Y66D K87F",4
"lib2","SARS-CoV-2","GACACGTCCATCAGGG",2,4.64,NA,NA,NA,NA,NA,NA,"stop","R27K N40H C61P A67P I104* R124A",6
"lib2","SARS-CoV-2","GACACTAAAATTTTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6R S41P I72*",3
"lib2","SARS-CoV-2","GACACTAAAGGACATA",3,0.69,NA,NA,NA,NA,NA,NA,"stop","S45F K87* S113L",3
"lib2","SARS-CoV-2","GACACTACAAATTGCA",3,89.19,10.92,0.09,0.05,2.8,1.2,0,">1 nonsynonymous","P7K P197I",2
"lib2","SARS-CoV-2","GACACTACCAAGTCAA",1,20.92,10.72,-0.12,0.07,2.83,1.15,0.01,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","GACACTACCTACTATT",8,83.34,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T55I Y66N F99S Y123V V153A P161T G166V",7
"lib2","SARS-CoV-2","GACACTACGTCTAGGA",3,49.08,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","L5T R27K Q84N C150R",4
"lib2","SARS-CoV-2","GACACTAGCCATAAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","V65P V71* N92R S139Y",4
"lib2","SARS-CoV-2","GACACTATGGACCTAT",5,70.99,10.76,-0.08,0.06,2.94,1.06,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GACACTATGGCCTCCA",9,104.57,10.58,-0.26,0.04,2.93,1.07,0,">1 nonsynonymous","A42T Y50F",2
"lib2","SARS-CoV-2","GACACTCACTAAGCTA",1,20.54,8.58,-2.26,0.14,2.08,1.06,0.01,">1 nonsynonymous","Y123E G155T",2
"lib2","SARS-CoV-2","GACACTCAGTGATCAA",2,114,10.86,0.03,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACACTCGTCTTCGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","N1H E135*",2
"lib2","SARS-CoV-2","GACACTCGTTGTTAAC",1,51.6,10.44,-0.4,0.04,2.88,1.06,0,">1 nonsynonymous","S108G P197F",2
"lib2","SARS-CoV-2","GACACTCTAAAGAATG",6,66.25,10.09,-0.74,0.07,2.65,1.12,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","GACACTCTAATTGAGT",1,6.72,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V37L F62A V77N L131E",4
"lib2","SARS-CoV-2","GACACTCTATCACATT",2,34.55,9.8,-1.04,0.07,2.52,1,0,">1 nonsynonymous","N4E G9L V37P D90M T201L",5
"lib2","SARS-CoV-2","GACACTCTTGGGGCTT",20,104.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5A K56S Q84L Q144L R179M",5
"lib2","SARS-CoV-2","GACACTCTTTCGTACC",3,15.86,6.08,-4.75,0.82,2.2,1.26,0.01,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","GACACTGAAGGATCAA",4,12.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T85Y L122P G146Y",3
"lib2","SARS-CoV-2","GACACTGAGAATAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45L K87R R127A P161L G174* V180K",6
"lib2","SARS-CoV-2","GACACTGTTCATAAAC",3,34.22,10.11,-0.73,0.1,2.64,1,0,">1 nonsynonymous","Q84M W106S",2
"lib2","SARS-CoV-2","GACACTTACACCCGCA",3,19.56,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","P7I T46G K94H Y119A N151L F156W Y178V A190C",8
"lib2","SARS-CoV-2","GACACTTCATATAAAT",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y P54M C102S",3
"lib2","SARS-CoV-2","GACACTTGATAAATCC",6,60.87,10.86,0.02,0.07,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GACACTTGTTCACATA",2,7.42,9.93,-0.9,0.17,2.83,1.06,0.01,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","GACACTTTATCGTTTG",5,20.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6Y I88N V115R V153K",4
"lib2","SARS-CoV-2","GACAGAAAATTGAGTT",1,5.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A Y39W F44M A105G",4
"lib2","SARS-CoV-2","GACAGAAAGATGCGAA",4,59.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F8K G86I E135W I142P T201N",5
"lib2","SARS-CoV-2","GACAGAAATCGCTTAA",5,118.38,10.87,0.03,0.06,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GACAGAACACATTAAT",9,111.79,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A14K T46S V77S L122W A145F C195V",6
"lib2","SARS-CoV-2","GACAGAACCCATTTTA",1,31.43,8.22,-2.62,0.23,1.5,1,0.02,">1 nonsynonymous","Y50C Y119R",2
"lib2","SARS-CoV-2","GACAGAACGTGCAGGT",4,84.11,9.87,-0.97,0.07,2.17,1.09,0,">1 nonsynonymous","N4S S45W V65L Q84G",4
"lib2","SARS-CoV-2","GACAGAAGAGAAAATC",12,88.08,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2C G86N A145L",3
"lib2","SARS-CoV-2","GACAGAAGGACTTTTG",1,9.55,6.38,-4.46,0.35,2.4,1.05,0,">1 nonsynonymous","P96T N107Q Q144A E154M P161K",5
"lib2","SARS-CoV-2","GACAGAATACAAACAT",4,30.78,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A14Y F70G L131M",3
"lib2","SARS-CoV-2","GACAGAATACTACCTG",6,102.39,10.2,-0.63,0.05,2.82,1.1,0,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","GACAGAATCCGCAGAG",2,47.61,9.86,-0.98,0.07,2.56,1,0,">1 nonsynonymous","P7F G83C P149L",3
"lib2","SARS-CoV-2","GACAGAATCGTCATAT",2,8.12,6.24,-4.59,0.52,3,1.07,0.01,">1 nonsynonymous","R73C I88R I104W G152T",4
"lib2","SARS-CoV-2","GACAGAATTAATAAAC",12,1050.43,8.84,-2,0.04,2.95,1.03,0,">1 nonsynonymous","N109Y N118E",2
"lib2","SARS-CoV-2","GACAGACAAATTAAAT",15,8.23,NA,NA,NA,NA,NA,NA,"stop","N4W P96L V103*",3
"lib2","SARS-CoV-2","GACAGACAATAACCCA",3,5.29,6.2,-4.64,1.55,3,1.1,0.01,">1 nonsynonymous","Y93K I104D C158E",3
"lib2","SARS-CoV-2","GACAGACAGTCCACAT",8,3.21,NA,NA,NA,NA,NA,NA,"stop","A81H G101I V173*",3
"lib2","SARS-CoV-2","GACAGACATTTGTATA",1,8.84,6.02,-4.81,2,1.5,1.1,0.04,">1 nonsynonymous","V71W A105S S164V",3
"lib2","SARS-CoV-2","GACAGACCATGACAAG",1,5.38,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","Q84I L95R G146C G152S N171E",5
"lib2","SARS-CoV-2","GACAGACCCACGTATG",4,156.34,9.42,-1.42,0.05,2.92,1.08,0,">1 nonsynonymous","N58S Y119T",2
"lib2","SARS-CoV-2","GACAGACCCCTTTATC",2,9.81,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","P7L T85S K94I T148P C158S Q168H S200Y",7
"lib2","SARS-CoV-2","GACAGACGACTAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F70N Y93* Y123L T201*",4
"lib2","SARS-CoV-2","GACAGACTCGAAGGAG",2,41.67,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S45P V103R R127I F167W",4
"lib2","SARS-CoV-2","GACAGACTCGACAGAC",2,23.23,9.71,-1.13,0.14,2.52,1.01,0.01,">1 nonsynonymous","C6R S164P",2
"lib2","SARS-CoV-2","GACAGAGAAAATCCAT",9,5.09,NA,NA,NA,NA,NA,NA,"stop","T55A F156C G196*",3
"lib2","SARS-CoV-2","GACAGAGAAGTTCAGT",5,22.29,8.79,-2.05,0.36,1.91,1.24,0.05,">1 nonsynonymous","S41V C49L",2
"lib2","SARS-CoV-2","GACAGAGCTTGCGCGC",1,41.42,10,-0.83,0.07,2.95,1.04,0,">1 nonsynonymous","Q168S G174Q",2
"lib2","SARS-CoV-2","GACAGAGGATTCTTTA",4,35.4,8.72,-2.12,0.09,2.52,1.01,0,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","GACAGAGTAATATCAA",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H V115K R136N Y143N",4
"lib2","SARS-CoV-2","GACAGAGTCACCTCCT",5,103.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25P N92I N107D T170Y",4
"lib2","SARS-CoV-2","GACAGAGTGTAAGTAT",4,7.38,NA,NA,NA,NA,NA,NA,"stop","K26* A42G K56P",3
"lib2","SARS-CoV-2","GACAGATAAATGTTTT",2,0.04,NA,NA,NA,NA,NA,NA,"stop","R27S A42* D59* D68V G83H Y119D",6
"lib2","SARS-CoV-2","GACAGATAACCCATTT",3,11.34,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F12V C31T L60E E76K G86Q",5
"lib2","SARS-CoV-2","GACAGATATGTCAATT",3,60.39,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","A14L Y21E Q163P",3
"lib2","SARS-CoV-2","GACAGATCAAGACAGG",7,38.47,10.5,-0.34,0.07,2.87,1.11,0,">1 nonsynonymous","S53T G155R",2
"lib2","SARS-CoV-2","GACAGATCCAATCTAT",9,14.28,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P82M F99R N118T",3
"lib2","SARS-CoV-2","GACAGATCCTGGCTGC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y21S L162*",2
"lib2","SARS-CoV-2","GACAGATGACGCAGTT",7,122.13,7.67,-3.16,0.15,1.5,1.07,0.01,">1 nonsynonymous","N120T Y178R",2
"lib2","SARS-CoV-2","GACAGATTGCTTTTTA",4,70.95,8.91,-1.93,0.08,2.92,1.12,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","GACAGCAAAGCAAATA",10,100.01,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N40L G51E L125T D137P",4
"lib2","SARS-CoV-2","GACAGCAACCTAGCAA",23,161.08,6,-4.84,2,3,1.24,0,">1 nonsynonymous","P7F I88L C158N",3
"lib2","SARS-CoV-2","GACAGCAAGCACGTAC",2,43.11,9.39,-1.44,0.15,2.29,1.12,0.01,">1 nonsynonymous","A33H G155Y",2
"lib2","SARS-CoV-2","GACAGCAAGCCGCCAG",1,21.18,10.88,0.04,0.08,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAGCATTATCCAGG",1,24.16,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G117K F167D",2
"lib2","SARS-CoV-2","GACAGCCACCTGTAAC",4,49.08,10.39,-0.44,0.08,2.75,1.1,0,">1 nonsynonymous","L60P A192R",2
"lib2","SARS-CoV-2","GACAGCCAGCACAGTG",9,167.7,6.33,-4.5,0.23,1.92,1.14,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GACAGCCATCAGTGGT",9,194.12,9.64,-1.19,0.05,1.99,1.02,0,"1 nonsynonymous","L38G",1
"lib2","SARS-CoV-2","GACAGCCCAAGTAATA",13,114.11,10.06,-0.77,0.06,2.52,1.07,0,">1 nonsynonymous","F99Y V173Y L187Q K198D",4
"lib2","SARS-CoV-2","GACAGCCCATGAAAAC",8,40.57,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N13L D97I N157V",3
"lib2","SARS-CoV-2","GACAGCCCGCGATAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V F99Y P133S Q176T",4
"lib2","SARS-CoV-2","GACAGCCCTCTATAGA",1,30.62,9.72,-1.12,0.14,2.52,1.06,0.01,">1 nonsynonymous","G9L D90F",2
"lib2","SARS-CoV-2","GACAGCGAAAAATGCG",1,5.87,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F8S A67G S113Q G146Y",4
"lib2","SARS-CoV-2","GACAGCGTTGCGGAAA",12,145.78,6.24,-4.59,0.36,1.5,1.15,0.01,">1 nonsynonymous","V37S D90N C150N A190S",4
"lib2","SARS-CoV-2","GACAGCTAGCACCACA",8,105.49,10.14,-0.69,0.04,2.81,1.08,0,"1 nonsynonymous","D34G",1
"lib2","SARS-CoV-2","GACAGCTCCTTAAAAT",10,140.57,9.03,-1.8,0.17,1.57,1.08,0.01,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","GACAGCTGAAGACGAA",8,24.29,6.8,-4.03,0.45,1.5,1.07,0.05,">1 nonsynonymous","T55I C61G Q84R I104R",4
"lib2","SARS-CoV-2","GACAGCTGATTAAATG",1,21.9,10.81,-0.02,0.09,2.95,1.06,0,">1 nonsynonymous","L5W P149E",2
"lib2","SARS-CoV-2","GACAGCTTACCGGATT",1,43.2,6,-4.84,1.97,3,1.15,0.01,">1 nonsynonymous","G117V F167V",2
"lib2","SARS-CoV-2","GACAGCTTAGTTTAAA",10,87.45,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L95T P149M F167A",3
"lib2","SARS-CoV-2","GACAGCTTGGATACAA",5,61.12,10.86,0.03,0.04,2.99,1.03,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","GACAGGAAAAATACTT",3,0,NA,NA,NA,NA,NA,NA,"stop","V103*",1
"lib2","SARS-CoV-2","GACAGGAAAATACATT",2,10.22,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N4I D90K L122K L162G",4
"lib2","SARS-CoV-2","GACAGGAAAATCTATA",11,72.05,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","E10D Y66P T201N",3
"lib2","SARS-CoV-2","GACAGGAAATAAAGCT",4,0.27,NA,NA,NA,NA,NA,NA,"stop","D90Y K114E S129* A145G",4
"lib2","SARS-CoV-2","GACAGGAATCGCCCTA",2,30.93,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","I88Y",1
"lib2","SARS-CoV-2","GACAGGAATCGTATCC",10,120.62,10.83,-0.01,0.07,2.85,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAGGAGAAACTATA",3,5.74,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13L C49R I104N V115L K128I",5
"lib2","SARS-CoV-2","GACAGGAGTCCACCCA",2,23.75,10.78,-0.05,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAGGATTGAGCACT",2,59.21,10.81,-0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACAGGCAGTCAAGGC",9,45.37,6.04,-4.8,0.49,3,1.15,0,">1 nonsynonymous","W23L F47S Y119M G146P",4
"lib2","SARS-CoV-2","GACAGGCCCTGTGCCA",18,114.22,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S43P Y93G",2
"lib2","SARS-CoV-2","GACAGGGCTCATAAGG",2,62.63,8.24,-2.6,0.08,1.73,1.15,0,">1 nonsynonymous","L60I F167L",2
"lib2","SARS-CoV-2","GACAGGGGCGAATTAC",3,31.43,9.99,-0.84,0.09,1.65,1,0,">1 nonsynonymous","I88C Y123K",2
"lib2","SARS-CoV-2","GACAGGTAAAGTAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23Y N92C P149T",3
"lib2","SARS-CoV-2","GACAGGTATAAACGGG",6,0.83,NA,NA,NA,NA,NA,NA,"stop","G9* L187G",2
"lib2","SARS-CoV-2","GACAGGTCACAGATAA",3,148.04,9.13,-1.71,0.03,2.96,1.08,0,">1 nonsynonymous","T15E Y119A",2
"lib2","SARS-CoV-2","GACAGGTTAAAATTTT",4,39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33G V103W K114A N120L",4
"lib2","SARS-CoV-2","GACAGGTTGTGCCCAA",1,5.14,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V77Q K94Y D112F P133Y N151V E154V G166N",7
"lib2","SARS-CoV-2","GACAGTAATTAATGAG",3,53.44,9.14,-1.7,0.08,2.38,1.05,0,">1 nonsynonymous","I2S S36I I142E",3
"lib2","SARS-CoV-2","GACAGTACTAGATCCT",3,46.92,8.25,-2.59,0.23,1.76,1.17,0.02,">1 nonsynonymous","F8I S113M P169L",3
"lib2","SARS-CoV-2","GACAGTACTTGAGGTG",15,129.05,10.53,-0.3,0.05,2.89,1.09,0,">1 nonsynonymous","S36G N120L",2
"lib2","SARS-CoV-2","GACAGTAGATGCTGAC",8,65.87,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23E Y119H Y143F",3
"lib2","SARS-CoV-2","GACAGTAGCATCAATT",3,31.67,10.62,-0.22,0.05,2.96,1.03,0,"1 nonsynonymous","L183M",1
"lib2","SARS-CoV-2","GACAGTATACCGATAA",3,78.08,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N58T A81P P149V E154S",4
"lib2","SARS-CoV-2","GACAGTATACCTTTAC",1,12.62,6.18,-4.66,2,1.5,1.23,0.03,">1 nonsynonymous","V52D W106F G116L L125P",4
"lib2","SARS-CoV-2","GACAGTATCAAGGATA",9,59.49,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I104Y L131F D137N P161S",4
"lib2","SARS-CoV-2","GACAGTCACGCCTGAT",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V F12N F62L T100I",4
"lib2","SARS-CoV-2","GACAGTCACTCACACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20C Q79V G86C Y143N",4
"lib2","SARS-CoV-2","GACAGTCAGTCTTTTT",11,178.7,10.59,-0.25,0.04,2.9,1.05,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","GACAGTCCAAAATCTT",2,40.47,6,-4.84,1.74,1.5,1.14,0.02,">1 nonsynonymous","G9Y Y91S R127I Q163L",4
"lib2","SARS-CoV-2","GACAGTCCAGTACAAT",6,1.8,NA,NA,NA,NA,NA,NA,"stop","N120F E141* C150W",3
"lib2","SARS-CoV-2","GACAGTCCCACAACGC",8,59.54,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D34G S53Q Y93T F156A",4
"lib2","SARS-CoV-2","GACAGTGACATAGAAT",10,58.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2A Y93K Y119W K132T Y143I",5
"lib2","SARS-CoV-2","GACAGTGCCCTAAGAA",1,27.1,9.51,-1.32,0.08,2.1,1,0,">1 nonsynonymous","V32M V77Q I104M",3
"lib2","SARS-CoV-2","GACAGTGCTATACACA",4,90.15,10.82,-0.01,0.07,2.84,1.17,0,"1 nonsynonymous","K199Y",1
"lib2","SARS-CoV-2","GACAGTGGGCAGGTCT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","A33* R136D A145V",3
"lib2","SARS-CoV-2","GACAGTTACCTGACGA",7,48.41,9.24,-1.6,0.14,1.76,1.16,0.01,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","GACAGTTAGGAATTAG",4,29.08,7.48,-3.35,0.22,1.63,1.11,0.01,">1 nonsynonymous","S41T F47G G174R",3
"lib2","SARS-CoV-2","GACAGTTCAAAGGTTC",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* S147*",2
"lib2","SARS-CoV-2","GACAGTTCCCCAAAAG",12,100.03,9.27,-1.56,0.07,1.76,1.09,0,"1 nonsynonymous","V77S",1
"lib2","SARS-CoV-2","GACAGTTCGCACATAT",5,9.67,6,-4.84,2,1.5,1.1,0.07,">1 nonsynonymous","F12C Y121H F167W A190S",4
"lib2","SARS-CoV-2","GACAGTTCTTGAATAT",2,18.07,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","L38P D90Y D98V C102M T201S",5
"lib2","SARS-CoV-2","GACAGTTTACATACCT",5,77.83,9.09,-1.75,0.03,2.94,1.09,0,">1 nonsynonymous","L5Y N151Q N157G A190L",4
"lib2","SARS-CoV-2","GACAGTTTGGAATGTT",2,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S T85M",2
"lib2","SARS-CoV-2","GACATAAAAACAAATA",5,107.14,10.23,-0.61,0.02,2.94,1.07,0,">1 nonsynonymous","R73M K132R",2
"lib2","SARS-CoV-2","GACATAAAAATTAACG",5,21.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","GACATAAACATAAAAC",5,36.88,7.57,-3.27,0.39,1.5,1.01,0.06,">1 nonsynonymous","Q84T A89L",2
"lib2","SARS-CoV-2","GACATAAACTAAAACA",3,3.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2G",1
"lib2","SARS-CoV-2","GACATAAACTACTGTA",7,26.74,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D97K N130L V181G",3
"lib2","SARS-CoV-2","GACATAAAGATAATAA",5,5.44,NA,NA,NA,NA,NA,NA,"stop","V77* G83S Y119R",3
"lib2","SARS-CoV-2","GACATAAATAATATAA",14,1.79,NA,NA,NA,NA,NA,NA,"stop","T15F S29P T100*",3
"lib2","SARS-CoV-2","GACATAAATAGTATGA",16,145.75,8.82,-2.02,0.13,1.89,1.15,0.01,">1 nonsynonymous","C6E K56G Y91M S129A",4
"lib2","SARS-CoV-2","GACATAAATGACATTA",2,57.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","E10L S45C N151Y G155N Q168F Y175G",6
"lib2","SARS-CoV-2","GACATAAATGCTAAGT",6,43.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R Y35N W106K S147I G155L",5
"lib2","SARS-CoV-2","GACATAACAGAAGAGA",5,71.1,10.78,-0.05,0.04,2.96,1.06,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","GACATAACAGTGGAGG",9,144.5,9.56,-1.27,0.06,1.84,1.09,0,">1 nonsynonymous","N58L S139F",2
"lib2","SARS-CoV-2","GACATAACGTCTGTAC",12,122.85,10.87,0.03,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATAACTCCCTACG",4,30.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11I N64D N92W I138F G155R",5
"lib2","SARS-CoV-2","GACATAAGCCGATTAT",8,25.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F62C S69E T100L P133R",4
"lib2","SARS-CoV-2","GACATAATAACGTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G83* Y91C P133F",3
"lib2","SARS-CoV-2","GACATAATACCTATTG",2,33.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14T S29P D90F L125T F134I",5
"lib2","SARS-CoV-2","GACATAATTAAGGTAA",1,14.2,6.14,-4.69,0.9,1.5,1.21,0.02,">1 nonsynonymous","P82L E135Y",2
"lib2","SARS-CoV-2","GACATACAAAAAACTA",4,0.27,NA,NA,NA,NA,NA,NA,"stop","F44W P54*",2
"lib2","SARS-CoV-2","GACATACAAATTAAAC",6,50.07,8.95,-1.89,0.09,2.8,1.06,0,">1 nonsynonymous","A89S E141G Y159F",3
"lib2","SARS-CoV-2","GACATACAACTCTGCA",1,40.9,9.49,-1.35,0.09,1.87,1.03,0.01,">1 nonsynonymous","F8V S139L",2
"lib2","SARS-CoV-2","GACATACAATTTAATA",5,50.21,6.27,-4.57,0.52,1.5,1.12,0.01,">1 nonsynonymous","N4T A14C F99T",3
"lib2","SARS-CoV-2","GACATACACAGCATAT",3,35.75,10.28,-0.56,0.05,2.93,1.06,0,">1 nonsynonymous","N58H K132T F160M",3
"lib2","SARS-CoV-2","GACATACACATAGAAG",1,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17K W23K C150A",3
"lib2","SARS-CoV-2","GACATACACGAACTGA",3,29.14,6.3,-4.54,0.71,1.5,1.25,0.03,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","GACATACATGTTCCCT",1,121.48,10.72,-0.12,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATACCAACCATTC",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107A R136T",2
"lib2","SARS-CoV-2","GACATACCAAGTACAC",14,150.93,10.83,-0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATACCATACATGG",10,59.42,10.69,-0.14,0.04,2.92,1.1,0,"1 nonsynonymous","S43W",1
"lib2","SARS-CoV-2","GACATACGTTTACCAC",3,32.39,10.59,-0.24,0.06,2.95,1,0,">1 nonsynonymous","F8L A22T Q163T",3
"lib2","SARS-CoV-2","GACATACTCCCGAGAG",7,98.49,9.31,-1.53,0.11,1.96,1.08,0,">1 nonsynonymous","S43Q R127L S147Q",3
"lib2","SARS-CoV-2","GACATACTTGCAAGTT",4,19.17,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","E10I Q84W P96L N110G L131G",5
"lib2","SARS-CoV-2","GACATAGAATGCTCGC",14,70.79,6,-4.84,1.87,1.5,1.11,0,">1 nonsynonymous","A14N F62K F70H K87L C102D",5
"lib2","SARS-CoV-2","GACATAGACCAAGAGG",1,13.82,10.72,-0.11,0.09,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATAGACTAGGCAA",4,88.17,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S45Y K94S C150S",3
"lib2","SARS-CoV-2","GACATAGAGTCTTGAC",1,6.71,10.57,-0.27,0.18,3,1.02,0.01,">1 nonsynonymous","D97T E141R",2
"lib2","SARS-CoV-2","GACATAGGAATAAAAA",9,42.33,10.18,-0.66,0.1,2.44,1.01,0,">1 nonsynonymous","N13E T63C P149N",3
"lib2","SARS-CoV-2","GACATAGGCTATCCCC",7,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L G9F A42C R73F S139R V182C",6
"lib2","SARS-CoV-2","GACATAGTACACAAAA",2,50.55,10.67,-0.16,0.06,2.89,1.09,0,">1 nonsynonymous","S41L S129R",2
"lib2","SARS-CoV-2","GACATATAGCGTGGAG",10,75.47,10.13,-0.71,0.07,2.48,1.04,0,">1 nonsynonymous","A14L A22S",2
"lib2","SARS-CoV-2","GACATATATATAGAGC",3,48.7,10.92,0.09,0.1,2.78,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATATATCAAGAAA",11,64.44,6.65,-4.18,0.67,1.5,1.21,0.06,">1 nonsynonymous","G51W L57S I142M",3
"lib2","SARS-CoV-2","GACATATGAATGAGCA",6,88.11,10.82,-0.01,0.07,2.91,1.11,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","GACATATGAGAATGTA",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G Q84R Y91V G152I",4
"lib2","SARS-CoV-2","GACATATTCCACTAAA",4,45.93,10.73,-0.1,0.04,2.88,1.12,0,"1 nonsynonymous","F160G",1
"lib2","SARS-CoV-2","GACATATTGCCATTTA",10,40.11,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","C49V K56M I80S",3
"lib2","SARS-CoV-2","GACATATTGTCTGATA",12,84.32,6,-4.84,1.84,1.5,1.18,0.03,">1 nonsynonymous","K87R F99Y L122E P149L L162G P177K",6
"lib2","SARS-CoV-2","GACATCAATCCCGTTC",1,6.54,9.13,-1.71,0.2,2.82,1.14,0.01,">1 nonsynonymous","K87C S113N Q168F P197S",4
"lib2","SARS-CoV-2","GACATCACGTATATTC",1,9.42,10.72,-0.12,0.17,2.7,1.07,0.01,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","GACATCACTCCTAGAT",7,60.75,8.14,-2.69,0.23,1.5,1.07,0.02,">1 nonsynonymous","L131S P149N",2
"lib2","SARS-CoV-2","GACATCAGGAAATGCT",1,35.09,8.54,-2.29,0.11,3,1.07,0.01,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","GACATCAGTATTCTTG",12,116.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29I Y35M K94R I104G",4
"lib2","SARS-CoV-2","GACATCATAAAGCCGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101H",1
"lib2","SARS-CoV-2","GACATCATAGGCATAA",1,7.9,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","L95A N120K E135S L183A K198A",5
"lib2","SARS-CoV-2","GACATCATATTCTAAC",3,20.3,6,-4.84,2,1.5,1.16,0.03,"1 nonsynonymous","V182R",1
"lib2","SARS-CoV-2","GACATCCAAAAGGTCT",2,60.05,9.81,-1.02,0.03,2.92,1.07,0,"1 nonsynonymous","Q168E",1
"lib2","SARS-CoV-2","GACATCCAATGAAATA",9,139.58,9.62,-1.22,0.07,1.82,1.05,0,"1 nonsynonymous","F17R",1
"lib2","SARS-CoV-2","GACATCCACGAGACAT",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21S L57A K94V P177Q A190R C195R",6
"lib2","SARS-CoV-2","GACATCCACTAATTGA",14,237.29,8.38,-2.46,0.09,2.73,1.07,0,">1 nonsynonymous","N1E V32I L125S P161T",4
"lib2","SARS-CoV-2","GACATCCAGATGCGCT",5,91.01,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V37K G86N Y93V P149S Q176T",5
"lib2","SARS-CoV-2","GACATCCATAGCCGTA",3,23.18,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","Y93P Y119F G152L P197T",4
"lib2","SARS-CoV-2","GACATCCCAAATTCAT",1,36.19,9.88,-0.96,0.09,2.18,1,0,">1 nonsynonymous","L38N T201N",2
"lib2","SARS-CoV-2","GACATCCCATCCTTTA",4,72.24,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37T S45V G51T D59G S184F",5
"lib2","SARS-CoV-2","GACATCCCTGACACGT",12,45.16,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F12L D68F D90Q Y143Q P149S",5
"lib2","SARS-CoV-2","GACATCCGCCATTGCT",1,9.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3S V103M S184L",3
"lib2","SARS-CoV-2","GACATCCTTGGACAAG",2,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q168R G172D",2
"lib2","SARS-CoV-2","GACATCGTAAACCATA",2,23.1,10.81,-0.03,0.06,2.99,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATCTAGAATTTAT",13,266.42,10.5,-0.33,0.03,2.94,1.05,0,">1 nonsynonymous","Y50F F160L",2
"lib2","SARS-CoV-2","GACATCTAGCTTACAA",3,25.86,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","I2S D68K",2
"lib2","SARS-CoV-2","GACATCTAGGACGCTA",9,3.68,NA,NA,NA,NA,NA,NA,"stop","K94F Y175*",2
"lib2","SARS-CoV-2","GACATCTCAATCACTT",10,4.01,NA,NA,NA,NA,NA,NA,"stop","I2G A14* R73L V103F Y119I I138H Q144K",7
"lib2","SARS-CoV-2","GACATCTTTCGGTCTC",4,61.21,9.02,-1.82,0.05,2.86,1.12,0,">1 nonsynonymous","L60N Y119M K199L",3
"lib2","SARS-CoV-2","GACATCTTTGCGGTAA",5,95.53,10.87,0.03,0.03,2.86,1.16,0,">1 nonsynonymous","V37L S129K",2
"lib2","SARS-CoV-2","GACATGAAATCTGACC",15,38.23,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V20L A33M P133C G152V",4
"lib2","SARS-CoV-2","GACATGAATAATTACG",13,88.24,10.81,-0.02,0.04,2.92,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GACATGACTCCCGCAT",2,19.21,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","S36G F47L P54V A145D P191I",5
"lib2","SARS-CoV-2","GACATGAGAATGAGAT",6,70.79,10.53,-0.3,0.04,2.85,1.11,0,"1 nonsynonymous","F44A",1
"lib2","SARS-CoV-2","GACATGAGACCTGCTA",3,86.43,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N40P G86R",2
"lib2","SARS-CoV-2","GACATGAGGTCAAATC",7,122.3,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S43N P177T",2
"lib2","SARS-CoV-2","GACATGAGTCAGCAAT",1,42.5,10.83,0,0.12,2.83,1.13,0.01,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","GACATGATCACCCAAC",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V W106G E135R",3
"lib2","SARS-CoV-2","GACATGCATGAAAGTT",2,99.14,10.68,-0.15,0.03,2.92,1.09,0,">1 nonsynonymous","I2L A33L K198M",3
"lib2","SARS-CoV-2","GACATGCCACAACCAG",3,12.95,8.27,-2.57,0.2,2.09,1.08,0.01,">1 nonsynonymous","N40R V52S L122S N157A K199R",5
"lib2","SARS-CoV-2","GACATGCCCAAAAGAT",6,0.62,NA,NA,NA,NA,NA,NA,"stop","F44* K56C T100S R127F N151P",5
"lib2","SARS-CoV-2","GACATGCCGACGACCA",6,19.07,6,-4.84,2,3,1.16,0.02,">1 nonsynonymous","N4S A81P Y93K Y119H N157L P169S T201M",7
"lib2","SARS-CoV-2","GACATGCCTGTTAACA",11,120.29,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44D Y50S S129E F134C",4
"lib2","SARS-CoV-2","GACATGCCTTTGTCCG",1,0.54,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","GACATGCGCGGGCTCA",5,34.41,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","T63P F70A G101R",3
"lib2","SARS-CoV-2","GACATGCTTATAAATA",1,50.83,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V71L C150T",2
"lib2","SARS-CoV-2","GACATGGAAAACTATC",11,82.3,7.9,-2.94,0.21,1.5,1.16,0.01,">1 nonsynonymous","C61G A89R",2
"lib2","SARS-CoV-2","GACATGGCAAAACTTG",3,60.75,8.3,-2.54,0.11,2.54,1.07,0.01,">1 nonsynonymous","F12L R73S F156G",3
"lib2","SARS-CoV-2","GACATGGCAATCCACT",3,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F A18W P96Y",3
"lib2","SARS-CoV-2","GACATGGGATAAAATC",3,1.37,NA,NA,NA,NA,NA,NA,"stop","D59* R124D G152C",3
"lib2","SARS-CoV-2","GACATGGTCAAGCCAA",4,62.38,10.44,-0.39,0.05,2.92,1.04,0,"1 nonsynonymous","C49W",1
"lib2","SARS-CoV-2","GACATGGTGTACAGAG",7,71.25,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y35A S113W L122G C158V",4
"lib2","SARS-CoV-2","GACATGGTTAAGAAAA",3,60.22,8.99,-1.85,0.07,2.76,1.14,0,">1 nonsynonymous","A22E K87N D98N E154I S184Y P191L",6
"lib2","SARS-CoV-2","GACATGGTTACTAAGT",9,0.5,NA,NA,NA,NA,NA,NA,"stop","N1M A14V T15D I28* F44V T55S S113V R127L Y175*",9
"lib2","SARS-CoV-2","GACATGTATTCGTAAT",5,0.81,NA,NA,NA,NA,NA,NA,"stop","Q84H C102W D112* A190S",4
"lib2","SARS-CoV-2","GACATGTATTCTACCA",2,39.16,9.62,-1.22,0.07,2.79,1.18,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","GACATGTGAGATGAAT",6,76.68,10.75,-0.08,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATGTGCAGATACA",5,42.53,10.14,-0.7,0.17,2.05,1,0.01,">1 nonsynonymous","L5R L38G S147N",3
"lib2","SARS-CoV-2","GACATGTGTATCTGCC",3,104.57,10.82,-0.01,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATTAAAATCAAGG",1,31.59,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L38P F99L N120Y",3
"lib2","SARS-CoV-2","GACATTAACGTCTAAA",5,17.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19T D90H D98V E135M",4
"lib2","SARS-CoV-2","GACATTAACTTATACC",7,33.22,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","GACATTAAGAAGCCAC",4,27.52,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S113Q Y143K T170H",3
"lib2","SARS-CoV-2","GACATTAAGTTTTCAT",5,21.93,6,-4.84,1.69,1.5,1.12,0.01,">1 nonsynonymous","V37I F44R G117P V180D",4
"lib2","SARS-CoV-2","GACATTAATCTATTTC",9,146.92,10.17,-0.67,0.03,2.95,1.03,0,"1 nonsynonymous","G166S",1
"lib2","SARS-CoV-2","GACATTAATTACAACC",3,22.96,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F8S F62M R136L",3
"lib2","SARS-CoV-2","GACATTACCAGCGAAG",1,32.9,10.72,-0.12,0.07,2.92,1.1,0,">1 nonsynonymous","S43I T85Y Q163Y",3
"lib2","SARS-CoV-2","GACATTACCGTGTACT",3,1.21,NA,NA,NA,NA,NA,NA,"stop","L5R R73* D97K I142Y T201Q",5
"lib2","SARS-CoV-2","GACATTACTACGCAGG",1,27.38,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R27G P96S N110P Y119K K128P",5
"lib2","SARS-CoV-2","GACATTACTCTCGATA",2,13.95,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","I2R C158I Q168G T201L",4
"lib2","SARS-CoV-2","GACATTAGGAACATTA",1,10.97,8.46,-2.37,0.17,1.96,1,0.01,">1 nonsynonymous","F126V L162T",2
"lib2","SARS-CoV-2","GACATTATAGGCTCAT",14,93.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H N40C T63G G83M",4
"lib2","SARS-CoV-2","GACATTATTATCCTAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","I2K C61A N107Y N120S I142S F167* S200P",7
"lib2","SARS-CoV-2","GACATTCATTAGAAAC",3,114.61,10.84,0.01,0.05,2.94,1.07,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","GACATTCCACTATTTG",9,61.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50T V65K K94D",3
"lib2","SARS-CoV-2","GACATTCGTCATACCC",2,24.28,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5F N13V N30K T46E N64E G86I",6
"lib2","SARS-CoV-2","GACATTCTACACTTAT",1,29.03,10.11,-0.72,0.12,2.66,1.38,0.01,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","GACATTGAACTTATCA",15,277.57,10.01,-0.82,0.04,2.69,1.06,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","GACATTGAATCTATCT",7,29.28,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F99H K114Y P161K",3
"lib2","SARS-CoV-2","GACATTGACATGGCTT",9,31.57,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","G9H S69K G86D S113P K199M",5
"lib2","SARS-CoV-2","GACATTGATTTGATCT",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G Y91L",2
"lib2","SARS-CoV-2","GACATTGCCAGGCCAC",11,135.78,10.72,-0.12,0.04,2.93,1.09,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","GACATTGCCCTACCAT",5,54,10.19,-0.65,0.05,2.59,1.04,0,">1 nonsynonymous","K94G V153K",2
"lib2","SARS-CoV-2","GACATTGTCCTAAATG",2,65.15,9.99,-0.85,0.05,2.75,1,0,">1 nonsynonymous","C6V S29P",2
"lib2","SARS-CoV-2","GACATTGTCTAAAATG",10,66.68,10.22,-0.62,0.04,2.8,1.09,0,">1 nonsynonymous","G51S I104M",2
"lib2","SARS-CoV-2","GACATTGTTGACATCT",3,35.89,10.89,0.05,0.07,2.85,1.17,0,"1 nonsynonymous","S36D",1
"lib2","SARS-CoV-2","GACATTTACTCGCATA",5,10.99,NA,NA,NA,NA,NA,NA,"stop","N13Y S29D D59K V103F G117Q R136*",6
"lib2","SARS-CoV-2","GACATTTCCTAACTTG",1,0.07,NA,NA,NA,NA,NA,NA,"stop","C61A L122* E135S N171R G196P",5
"lib2","SARS-CoV-2","GACATTTCGAGTTCAA",3,18.51,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","P7T S41E N107A Y123F V153L Y165G",6
"lib2","SARS-CoV-2","GACATTTCTAGTACAT",3,21.07,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G74E A89G S113I G152S V181Y",5
"lib2","SARS-CoV-2","GACATTTTAGATTCTA",7,100.93,10.83,-0.01,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACATTTTTTGAACAG",6,116.11,10.68,-0.16,0.02,2.93,1.07,0,">1 nonsynonymous","P54Y N64K T100I",3
"lib2","SARS-CoV-2","GACCAAAAAATCTTAT",3,46.68,10.13,-0.7,0.09,2.73,1.01,0,"1 nonsynonymous","K94M",1
"lib2","SARS-CoV-2","GACCAAAACACGATGG",7,42.21,6.87,-3.96,0.41,1.5,1.13,0.03,">1 nonsynonymous","V20W T148L",2
"lib2","SARS-CoV-2","GACCAAAATTACTATT",2,121.44,9.89,-0.95,0.06,2.33,1,0,">1 nonsynonymous","L57Y S129Y",2
"lib2","SARS-CoV-2","GACCAAACACAGGTTT",7,65.36,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A18V L60T Y119C Q163P",4
"lib2","SARS-CoV-2","GACCAAACACTACGGA",9,144.13,8.66,-2.17,0.07,2.3,1.09,0,">1 nonsynonymous","L38D F156T S200V",3
"lib2","SARS-CoV-2","GACCAAACATACTACG",9,74.65,6.63,-4.21,0.49,1.5,1.24,0.03,">1 nonsynonymous","C6V F47N N130F",3
"lib2","SARS-CoV-2","GACCAAACGACATCGA",9,20.72,6.02,-4.81,0.71,3,1.05,0.01,">1 nonsynonymous","F99S Y121L N157P",3
"lib2","SARS-CoV-2","GACCAAACTATGCTAA",6,118.49,7.94,-2.89,0.25,1.5,1.1,0.02,">1 nonsynonymous","K128N T140P Y165H",3
"lib2","SARS-CoV-2","GACCAAAGACTACCCA",3,67.7,7.95,-2.88,0.17,1.93,1.11,0.01,">1 nonsynonymous","L5H E154L C158S",3
"lib2","SARS-CoV-2","GACCAAAGCAGTGATC",1,24.56,10.18,-0.65,0.08,2.85,1.06,0,">1 nonsynonymous","C49W K56I",2
"lib2","SARS-CoV-2","GACCAAAGGAACCTAT",9,82.41,6.24,-4.59,0.67,1.5,1.24,0.02,">1 nonsynonymous","C61R I80A N107S",3
"lib2","SARS-CoV-2","GACCAAAGGCTGTCAA",6,57.23,9.88,-0.96,0.05,2.93,1.11,0,">1 nonsynonymous","V37A T170Y",2
"lib2","SARS-CoV-2","GACCAAATATAACTTA",4,99.79,10.28,-0.56,0.03,2.92,1.08,0,">1 nonsynonymous","S147A G174K",2
"lib2","SARS-CoV-2","GACCAAATCAACACTG",10,93.19,9.77,-1.07,0.1,2.18,1.04,0,"1 nonsynonymous","A105H",1
"lib2","SARS-CoV-2","GACCAACAAAGCACGG",11,72.29,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N40A K94L Y123E N171C",4
"lib2","SARS-CoV-2","GACCAACACTATATAT",1,16.61,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K56T F70N",2
"lib2","SARS-CoV-2","GACCAACAGTATTACT",6,53.69,7.23,-3.61,0.41,1.5,1.24,0.05,">1 nonsynonymous","F17R S29Y",2
"lib2","SARS-CoV-2","GACCAACATGTTTGCA",6,23.09,6.46,-4.37,0.72,1.5,1.23,0.04,">1 nonsynonymous","R27K V77Q Q84D L122R A145L V180G",6
"lib2","SARS-CoV-2","GACCAACCAAACAATT",7,3.45,NA,NA,NA,NA,NA,NA,"stop","S19T R27T V77R N151I K198*",5
"lib2","SARS-CoV-2","GACCAACCAGTCTAAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","GACCAACCTAAAAAAA",1,16.9,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D90F V180Y",2
"lib2","SARS-CoV-2","GACCAACGCCGATTTT",7,31.52,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","C49Q T63L P149N",3
"lib2","SARS-CoV-2","GACCAACGCCGTACCT",5,69.04,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K56L V103P V153S",3
"lib2","SARS-CoV-2","GACCAACTGACACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F A33Y N171C R179M",4
"lib2","SARS-CoV-2","GACCAACTTTAAACGC",1,16.56,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","L5K G86R N120E F126Y T140Q T201R",6
"lib2","SARS-CoV-2","GACCAAGGATACGCAC",1,53.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R R25L S45A K87Y",4
"lib2","SARS-CoV-2","GACCAAGGCAAAGAAA",2,46.79,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y93G P133L",2
"lib2","SARS-CoV-2","GACCAAGTATATACAC",4,66.1,7.93,-2.91,0.22,1.69,1.12,0.02,">1 nonsynonymous","C31M R136T",2
"lib2","SARS-CoV-2","GACCAATAAAGAGAAA",8,124.99,10.84,0,0.03,2.97,1.04,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","GACCAATAATACTGAA",15,131.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5F C49H T100Y Y121T F160A Y165G P177L",7
"lib2","SARS-CoV-2","GACCAATACGACGTGC",3,65.51,9.85,-0.98,0.07,2.02,1.03,0,">1 nonsynonymous","Y50Q D98N",2
"lib2","SARS-CoV-2","GACCAATAGCGGGACC",5,0.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62V",1
"lib2","SARS-CoV-2","GACCAATAGTAATCAT",7,86.07,9.62,-1.21,0.05,2.13,1.07,0,">1 nonsynonymous","G9V A33G L57S",3
"lib2","SARS-CoV-2","GACCAATATCGGTGTG",6,0,NA,NA,NA,NA,NA,NA,"stop","N4T A14R V20R V37W L95* E154R",6
"lib2","SARS-CoV-2","GACCAATATGATTAAA",3,91.78,10.46,-0.37,0.05,2.88,1.06,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","GACCAATCAAAAACAC",13,41.11,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","V71R G83Y P96A F99R G117L",5
"lib2","SARS-CoV-2","GACCAATGACATATTA",2,101.16,10.47,-0.37,0.05,2.96,1.06,0,">1 nonsynonymous","C61S S129P",2
"lib2","SARS-CoV-2","GACCAATGCACGATAC",2,32.25,10.73,-0.1,0.06,2.89,1.09,0,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","GACCAATGGCGAGTAG",6,33.04,6,-4.84,2,1.5,1.35,0.03,">1 nonsynonymous","A14L I88D K198Q",3
"lib2","SARS-CoV-2","GACCAATGGCTTACAA",8,0.05,NA,NA,NA,NA,NA,NA,"stop","S36R K87R I142S T201*",4
"lib2","SARS-CoV-2","GACCAATGTGAAAGAA",7,2.31,NA,NA,NA,NA,NA,NA,"stop","I72G G83F I88V F99* T201S",5
"lib2","SARS-CoV-2","GACCAATGTTTGCGCC",3,129.24,6.64,-4.19,0.23,1.5,1.17,0.01,">1 nonsynonymous","T15S T100M C158L",3
"lib2","SARS-CoV-2","GACCAATTAAACACAA",8,27.35,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N58L C102P T201W",3
"lib2","SARS-CoV-2","GACCAATTAACATGAT",5,92.04,8.73,-2.1,0.08,2.75,1.12,0,"1 nonsynonymous","Y143C",1
"lib2","SARS-CoV-2","GACCAATTACAGGTCA",5,25.48,9.88,-0.95,0.1,2.48,1.01,0,">1 nonsynonymous","Y35S F62L D90W",3
"lib2","SARS-CoV-2","GACCAATTTAACCTCT",2,15.09,10.85,0.01,0.07,2.84,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCACAAAAATAACT",11,153.2,8.62,-2.21,0.13,1.5,1.13,0.01,">1 nonsynonymous","S43T E135G R136E",3
"lib2","SARS-CoV-2","GACCACAACATTAAAC",7,70.15,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G74V D137L",2
"lib2","SARS-CoV-2","GACCACACCGAACACT",6,74.16,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","Y50L D98N Y123L L162D",4
"lib2","SARS-CoV-2","GACCACACCTAGTCTA",1,12.68,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","R25L S108E",2
"lib2","SARS-CoV-2","GACCACATATGAATTA",9,99.78,7.68,-3.16,0.16,1.5,1.13,0.01,">1 nonsynonymous","G9Y F47I Y119A L125R",4
"lib2","SARS-CoV-2","GACCACATGCTGAACG",6,7.82,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V11N S41N K48A G74P S129V E186I",6
"lib2","SARS-CoV-2","GACCACATTTACCGGA",13,183.26,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D34L P96H V115N F167V",4
"lib2","SARS-CoV-2","GACCACCACGATAAAA",3,31.93,9.06,-1.77,0.27,1.5,1,0.03,">1 nonsynonymous","D97L V103L P149V",3
"lib2","SARS-CoV-2","GACCACCATAGGCGGA",1,5.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E C150S",2
"lib2","SARS-CoV-2","GACCACCCATGACGTC",7,1.19,NA,NA,NA,NA,NA,NA,"stop","T15F A105E Y159*",3
"lib2","SARS-CoV-2","GACCACCCTAAAACCA",2,9.91,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L38G A105I",2
"lib2","SARS-CoV-2","GACCACCTCCGATATT",12,179.07,10.11,-0.72,0.03,2.8,1.04,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","GACCACGAACAAACGG",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63W P149I",2
"lib2","SARS-CoV-2","GACCACGCGTTAAATT",3,0,NA,NA,NA,NA,NA,NA,"stop","F44R A81* K114M E154N Y175*",5
"lib2","SARS-CoV-2","GACCACGGATATCCTA",17,242.98,10.07,-0.76,0.07,2.42,1.02,0,">1 nonsynonymous","L5I D98T R136V",3
"lib2","SARS-CoV-2","GACCACGGGGCCAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9T A14G P96* D98Y L122S N130Y",6
"lib2","SARS-CoV-2","GACCACGTTGAAAAAA",8,29.7,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","P82R I104T L131C T170V",4
"lib2","SARS-CoV-2","GACCACTAATAAAAGC",19,96.11,9.05,-1.79,0.12,1.78,1.09,0.01,">1 nonsynonymous","F12D C195R",2
"lib2","SARS-CoV-2","GACCACTATGACTCTC",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E Y159G",2
"lib2","SARS-CoV-2","GACCACTCAGCTCCCA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","GACCACTCTAAGGTAA",6,67.55,10.01,-0.83,0.05,2.6,1.05,0,">1 nonsynonymous","Y121N V194L",2
"lib2","SARS-CoV-2","GACCACTTCTACAAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S T63P",2
"lib2","SARS-CoV-2","GACCACTTGAGAAATA",7,51.37,10.63,-0.2,0.04,2.98,1.03,0,"1 nonsynonymous","S184F",1
"lib2","SARS-CoV-2","GACCACTTTCAGCCTG",4,87.22,10.51,-0.32,0.05,2.92,1.08,0,">1 nonsynonymous","S45T N58R",2
"lib2","SARS-CoV-2","GACCAGAAAAACATCG",3,21.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P7L G86D",2
"lib2","SARS-CoV-2","GACCAGAACGTTAATC",2,37.74,10.68,-0.15,0.07,2.93,1.1,0,">1 nonsynonymous","F62I V115R T148N V153N",4
"lib2","SARS-CoV-2","GACCAGAACTAAAACA",8,119.51,10.18,-0.66,0.05,2.5,1.03,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GACCAGACTTTATTAG",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74C G83Y V103W G116R T148D",5
"lib2","SARS-CoV-2","GACCAGCAACACCGTA",7,28.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D59N P82L I104N",3
"lib2","SARS-CoV-2","GACCAGCACCCGACAG",4,111.46,6.68,-4.16,0.21,1.5,1.14,0,">1 nonsynonymous","A14K C150A",2
"lib2","SARS-CoV-2","GACCAGCACGCCTAAA",1,22.02,10.32,-0.52,0.08,2.95,1,0,">1 nonsynonymous","T46D I104L",2
"lib2","SARS-CoV-2","GACCAGCAGTAGATGA",9,1.43,NA,NA,NA,NA,NA,NA,"stop","D112* Y119R C158D",3
"lib2","SARS-CoV-2","GACCAGCATAAAAACC",10,99.19,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P82L D112Y R136C",3
"lib2","SARS-CoV-2","GACCAGCCGAAATTAT",4,64.24,10.83,-0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCAGCTATACAAAG",4,16.85,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","N1R V11E D59E V71G A89Q S129F Q163Y",7
"lib2","SARS-CoV-2","GACCAGGAAAAACTGG",11,985.02,9.79,-1.05,0.03,2.68,1.06,0,">1 nonsynonymous","T148A V173P",2
"lib2","SARS-CoV-2","GACCAGGCGCATAACC",5,94.02,8.72,-2.12,0.11,2.1,1.16,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","GACCAGGTATGACGAT",1,1.69,NA,NA,NA,NA,NA,NA,"stop","F12C P133Y G146K Q168*",4
"lib2","SARS-CoV-2","GACCAGGTGTCACGCG",1,19.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6L I88W N107C G166S",4
"lib2","SARS-CoV-2","GACCAGTACTAACTAA",7,51.95,8.73,-2.11,0.27,1.5,1,0.03,">1 nonsynonymous","F70Y K128C",2
"lib2","SARS-CoV-2","GACCAGTCCATTATTG",8,44.2,6.2,-4.63,0.88,1.5,1.36,0.03,">1 nonsynonymous","A67N Y165I",2
"lib2","SARS-CoV-2","GACCAGTCGGTGTAAG",3,9.96,6.51,-4.32,0.65,1.5,1.2,0.04,">1 nonsynonymous","A42R F99R K132N T201R",4
"lib2","SARS-CoV-2","GACCAGTTCGAGTACA",9,91.37,9.76,-1.08,0.06,1.93,1.04,0,">1 nonsynonymous","F62M W106L",2
"lib2","SARS-CoV-2","GACCAGTTGTTAACTA",5,5.8,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D34M K94S",2
"lib2","SARS-CoV-2","GACCATAAAACTCAGG",2,62.3,10.32,-0.51,0.05,2.83,1.2,0,"1 nonsynonymous","T170W",1
"lib2","SARS-CoV-2","GACCATAAAGTATAAA",5,110.27,6,-4.84,0.8,1.5,1.14,0.01,">1 nonsynonymous","G9L D68Y R179K",3
"lib2","SARS-CoV-2","GACCATAACCTACACA",1,2.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","GACCATACCGATAACG",7,0.7,NA,NA,NA,NA,NA,NA,"stop","E10M G83* D98S V103A",4
"lib2","SARS-CoV-2","GACCATACCTATGGCT",9,123.67,10.72,-0.12,0.04,2.91,1.1,0,">1 nonsynonymous","V37D D97G",2
"lib2","SARS-CoV-2","GACCATACGGCACATG",1,43.02,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N4F K56G G101C",3
"lib2","SARS-CoV-2","GACCATACGTTTGAAT",2,13.36,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14F S53L F99S",3
"lib2","SARS-CoV-2","GACCATAGAAATCACC",5,25.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F17K T100E N107T S139H",4
"lib2","SARS-CoV-2","GACCATAGAACATCCG",1,49.19,8.74,-2.1,0.04,2.82,1.03,0,">1 nonsynonymous","A18Q Y119L",2
"lib2","SARS-CoV-2","GACCATAGGCAGGGGC",8,219.88,9.94,-0.9,0.04,2.87,1.06,0,">1 nonsynonymous","G51S F156L",2
"lib2","SARS-CoV-2","GACCATAGGCCTATTA",5,77.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L95I A105S T140Q P149N F167A",5
"lib2","SARS-CoV-2","GACCATAGTAACTCAA",3,9.67,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P54H A105K F134K",3
"lib2","SARS-CoV-2","GACCATATATACCCGG",1,40.48,7.71,-3.13,0.18,1.56,1.13,0.01,">1 nonsynonymous","D98V A145T N171R",3
"lib2","SARS-CoV-2","GACCATATATTGAGTA",1,10.83,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1Y C49D T55A L60T Q84S A89F",6
"lib2","SARS-CoV-2","GACCATATGAGATAAA",19,11.58,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib2","SARS-CoV-2","GACCATATGAGTTACA",1,2.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D137T",1
"lib2","SARS-CoV-2","GACCATATGCTATCTT",1,36.7,10.96,0.13,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCATCAATCATTAA",1,67.31,10.78,-0.06,0.09,2.92,1.05,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","GACCATCCCAACTCAG",15,149.87,7.96,-2.88,0.16,1.54,1.04,0.01,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","GACCATCGCACTATCA",2,16.6,10.13,-0.7,0.08,2.91,1.04,0.01,">1 nonsynonymous","E141G G174W",2
"lib2","SARS-CoV-2","GACCATCGTTCCCTCA",7,100.23,10.64,-0.19,0.04,2.92,1.02,0,">1 nonsynonymous","D90R N120G",2
"lib2","SARS-CoV-2","GACCATCTATTGACCG",6,38.14,10.7,-0.13,0.07,2.91,1.11,0,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","GACCATCTTGGAAGTT",5,8.34,6.54,-4.3,0.93,1.5,1.05,0.06,">1 nonsynonymous","Y50E S129Y P149C",3
"lib2","SARS-CoV-2","GACCATGACCAAAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib2","SARS-CoV-2","GACCATGATAATTAGC",2,11.76,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","G101F L122A P149L T170S K199Q",5
"lib2","SARS-CoV-2","GACCATGATACTTTAA",8,26.23,6,-4.84,1.17,1.5,1.17,0.01,">1 nonsynonymous","I104K S139I",2
"lib2","SARS-CoV-2","GACCATGCAAGAACGA",6,155.18,10.56,-0.28,0.05,2.91,1.09,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","GACCATGCAGACACAG",5,31.34,6.71,-4.13,0.52,1.5,1.19,0.06,">1 nonsynonymous","S45D Y93S D98Y Y121S Q144F",5
"lib2","SARS-CoV-2","GACCATGGACCAGTAA",3,39.76,6,-4.84,2,3,1.21,0,">1 nonsynonymous","E10V A14T D90R Y123P N151V E186D P197D",7
"lib2","SARS-CoV-2","GACCATGGGAGGTGAA",1,38.31,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C6I V37S Y159G",3
"lib2","SARS-CoV-2","GACCATGGGTTGAAAA",5,56.16,9.98,-0.86,0.11,2.29,1.03,0.01,"1 nonsynonymous","Y50I",1
"lib2","SARS-CoV-2","GACCATGTAACCGCGT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","F47V Y91*",2
"lib2","SARS-CoV-2","GACCATGTCCAAAAAA",6,105.51,9.8,-1.03,0.07,2.17,1.07,0,"1 nonsynonymous","L38P",1
"lib2","SARS-CoV-2","GACCATGTTCTATGAG",2,21.41,6,-4.84,2,3,1.24,0,">1 nonsynonymous","S41C F167H",2
"lib2","SARS-CoV-2","GACCATTAAATTAGAT",1,13.57,6,-4.84,2,3,1.06,0,">1 nonsynonymous","V65A G86W R124A G152Q G166H",5
"lib2","SARS-CoV-2","GACCATTAATGCCCAG",7,43.92,6.65,-4.19,0.36,1.5,1.18,0.02,">1 nonsynonymous","E10F K26Q F99A",3
"lib2","SARS-CoV-2","GACCATTAGCAAAATC",7,156.53,8.85,-1.98,0.05,2.52,1.12,0,">1 nonsynonymous","F47K F156S",2
"lib2","SARS-CoV-2","GACCATTAGCATGAAT",3,10.8,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T55P N64W F99E",3
"lib2","SARS-CoV-2","GACCATTATCACGACG",5,65.44,10.75,-0.09,0.06,2.98,1.05,0,">1 nonsynonymous","K56S K199L",2
"lib2","SARS-CoV-2","GACCATTGCTGAAGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","F62N Y93H Q144*",3
"lib2","SARS-CoV-2","GACCATTTCAAGATAA",10,192.26,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","P7L S36L G51V G83Y F99M R124Y Q176E",7
"lib2","SARS-CoV-2","GACCCAAAAAGACTTA",3,58.59,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37D C49K F134S",3
"lib2","SARS-CoV-2","GACCCAAAACACCCGC",3,41.37,8.99,-1.85,0.23,1.63,1.08,0.03,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","GACCCAAAATAACTCA",14,1.27,NA,NA,NA,NA,NA,NA,"stop","F44Y I88Q G117N C150* L162R",5
"lib2","SARS-CoV-2","GACCCAAACATCTGAA",3,49.21,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","V20P T55H T100S A105S Y123W Y165V P177I",7
"lib2","SARS-CoV-2","GACCCAAACTAATATA",6,69.69,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9M T55K F62I V71L D75P K87S L95R",7
"lib2","SARS-CoV-2","GACCCAACCAAAAATA",1,28.73,9.8,-1.03,0.12,2.3,1.02,0.01,">1 nonsynonymous","F8P V115L",2
"lib2","SARS-CoV-2","GACCCAACCGAAGCAC",1,7.6,10.55,-0.29,0.12,2.97,1,0,">1 nonsynonymous","K48A S139Q",2
"lib2","SARS-CoV-2","GACCCAACGAAAAAGT",1,70.06,10.93,0.09,0.06,2.96,1.04,0,">1 nonsynonymous","T55S V173L T201M",3
"lib2","SARS-CoV-2","GACCCAACGATTACCG",3,60.53,9.83,-1,0.11,2.04,1,0,">1 nonsynonymous","L5S D90R W106R",3
"lib2","SARS-CoV-2","GACCCAACGTTCAAAT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100D W106E",2
"lib2","SARS-CoV-2","GACCCAAGCCATATTC",7,41.03,10.64,-0.2,0.07,2.84,1.15,0,">1 nonsynonymous","T15S F62S T201R",3
"lib2","SARS-CoV-2","GACCCAAGCTAATATA",6,76.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G116S G172D",2
"lib2","SARS-CoV-2","GACCCAAGGGCGGGTA",10,76.49,8.66,-2.17,0.15,1.8,1.08,0.01,">1 nonsynonymous","V71L N118F",2
"lib2","SARS-CoV-2","GACCCAAGTAAAAAAC",4,98.64,6,-4.84,2,2.94,1.16,0,">1 nonsynonymous","A89R R136C",2
"lib2","SARS-CoV-2","GACCCAAGTAAATGAA",6,119.61,10.22,-0.61,0.06,2.76,1,0,"1 nonsynonymous","F134I",1
"lib2","SARS-CoV-2","GACCCACAATAACTAT",11,4.18,NA,NA,NA,NA,NA,NA,"stop","C61* Y123S Y165K T201L",4
"lib2","SARS-CoV-2","GACCCACACAAATGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L38* G83W D90H",3
"lib2","SARS-CoV-2","GACCCACACTACGATT",5,5.71,NA,NA,NA,NA,NA,NA,"stop","T3E S19T S36N C61D L111I G117* F126R",7
"lib2","SARS-CoV-2","GACCCACCATAACCAG",2,24.2,10.91,0.07,0.06,2.92,1.07,0,"1 nonsynonymous","T3P",1
"lib2","SARS-CoV-2","GACCCACCCCCCACCG",8,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Q D90M Q144E",3
"lib2","SARS-CoV-2","GACCCACGAGACAACG",1,11.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L C31S T55S R127I G155E G174A",6
"lib2","SARS-CoV-2","GACCCACGGCTTACAG",3,21.17,10.19,-0.65,0.11,2.72,1.14,0,">1 nonsynonymous","L5V N64L G155M",3
"lib2","SARS-CoV-2","GACCCACTCGACTGTG",8,45.15,10.82,-0.02,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCAGAACTTCCAA",12,62.63,10.8,-0.03,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCATAAGTACATG",4,47.28,10.73,-0.11,0.08,2.92,1.1,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","GACCCATGCGCGATAT",1,21.54,7.97,-2.87,0.46,1.5,1,0.07,">1 nonsynonymous","Y21E A33D",2
"lib2","SARS-CoV-2","GACCCATGTCCATGAG",1,9.84,8.67,-2.16,0.12,2.57,1.1,0,">1 nonsynonymous","T148L Q176S",2
"lib2","SARS-CoV-2","GACCCATTAGTACCAG",3,28.42,10.23,-0.61,0.11,2.62,1,0.01,"1 nonsynonymous","C102M",1
"lib2","SARS-CoV-2","GACCCATTTACGCACA",11,75.69,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","D98Y N107C I138A P149T",4
"lib2","SARS-CoV-2","GACCCATTTATAGCCT",4,8.4,10.15,-0.68,0.1,2.71,1.34,0.01,"1 nonsynonymous","D98C",1
"lib2","SARS-CoV-2","GACCCATTTCGCGGTT",6,105.15,10.83,-0.01,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCCAAATAAATGA",4,37.54,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F99L C158M",2
"lib2","SARS-CoV-2","GACCCCAAGTGTTGAA",18,223.7,10.65,-0.19,0.02,2.97,1.03,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","GACCCCACCGCTGAGT",9,52.01,10.83,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCCACGTAACAAC",8,55.09,6,-4.84,0.86,1.5,1.16,0.01,">1 nonsynonymous","Y35I Q84F D112L S147W",4
"lib2","SARS-CoV-2","GACCCCATACTAACCG",8,32.02,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6W V11N K48N C150S",4
"lib2","SARS-CoV-2","GACCCCCAGGGCAAGA",2,16.44,9.27,-1.56,0.11,2.81,1.19,0,"1 nonsynonymous","F156E",1
"lib2","SARS-CoV-2","GACCCCCCTAAGCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","D90L E154*",2
"lib2","SARS-CoV-2","GACCCCCGGTCCAAGG",4,45.06,10.68,-0.16,0.06,2.94,1.06,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","GACCCCCTTACATAAG",6,30.82,9.14,-1.69,0.24,1.5,1,0.03,">1 nonsynonymous","T15I R127G G152N",3
"lib2","SARS-CoV-2","GACCCCCTTTAATTAA",2,85.23,10.58,-0.26,0.05,2.92,1.06,0,">1 nonsynonymous","A89C T201Q",2
"lib2","SARS-CoV-2","GACCCCGAGTGAAAAC",8,64.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C49H T100S V115L Y165E",4
"lib2","SARS-CoV-2","GACCCCGGATATTTTT",5,74.87,10.04,-0.8,0.08,2.39,1.05,0,">1 nonsynonymous","Y93F F134W",2
"lib2","SARS-CoV-2","GACCCCGTAAAGATCT",3,21.54,10.86,0.02,0.06,3,1.02,0,"1 nonsynonymous","L5T",1
"lib2","SARS-CoV-2","GACCCCTAACCGAACA",5,47.29,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G86E I142F",2
"lib2","SARS-CoV-2","GACCCCTGACTTATAG",1,19.8,10.91,0.07,0.11,2.96,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACCCGAAGCCAAATA",5,74.64,10.73,-0.11,0.05,2.91,1.09,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","GACCCGAATTCCAAGG",8,154.68,10.96,0.12,0.06,2.94,1.05,0,">1 nonsynonymous","L5Q V37E",2
"lib2","SARS-CoV-2","GACCCGACCTTTAATC",11,3.19,NA,NA,NA,NA,NA,NA,"stop","D137W G146*",2
"lib2","SARS-CoV-2","GACCCGACTGCTGAAA",5,111.95,10.78,-0.06,0.06,2.87,1.12,0,">1 nonsynonymous","L60V N120Q",2
"lib2","SARS-CoV-2","GACCCGATACCCCTAA",5,100.09,10.38,-0.46,0.03,2.88,1.12,0,"1 nonsynonymous","S164L",1
"lib2","SARS-CoV-2","GACCCGCACGGTCTTT",1,13.34,7.83,-3.01,0.39,1.5,1.08,0.07,">1 nonsynonymous","D90Y S113Q",2
"lib2","SARS-CoV-2","GACCCGCAGCGGGTAA",1,41.6,9.75,-1.09,0.12,2.02,1.09,0.01,">1 nonsynonymous","I2N N107G S139R",3
"lib2","SARS-CoV-2","GACCCGCAGGCTATAA",20,6.36,9.37,-1.46,0.32,2.32,1,0.05,">1 nonsynonymous","N13S A33V D68K G101K L162R",5
"lib2","SARS-CoV-2","GACCCGCGATATCTTG",4,17.75,6,-4.84,2,2.93,1.14,0,">1 nonsynonymous","V11T R25E N64E",3
"lib2","SARS-CoV-2","GACCCGCTAAATGGAT",6,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50A V103Q",2
"lib2","SARS-CoV-2","GACCCGCTACCCAACA",4,28.5,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F70T Q84L Y93H D112E",4
"lib2","SARS-CoV-2","GACCCGGATAAGAAGT",7,85.77,10.92,0.08,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCGGATGTACCTA",5,2.37,NA,NA,NA,NA,NA,NA,"stop","K94V F99W E141* S147N",4
"lib2","SARS-CoV-2","GACCCGGCAACAAAAA",2,38.6,8.55,-2.29,0.17,2.29,1.03,0.01,">1 nonsynonymous","F44G S53C V103I Y123R G174L",5
"lib2","SARS-CoV-2","GACCCGGCACTTTATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19N P82T T100L L183N",4
"lib2","SARS-CoV-2","GACCCGGGCAACCCAC",11,161.2,10.78,-0.06,0.06,2.8,1.19,0,">1 nonsynonymous","N130L T148Q L187S",3
"lib2","SARS-CoV-2","GACCCGGGGGTGAACT",11,0.75,NA,NA,NA,NA,NA,NA,"stop","L57T K94* L131S",3
"lib2","SARS-CoV-2","GACCCGGTAGATACTA",7,33.4,6,-4.84,2,1.5,1.26,0.08,">1 nonsynonymous","W23L I80K P169M",3
"lib2","SARS-CoV-2","GACCCGGTTTCCAACT",5,2.32,NA,NA,NA,NA,NA,NA,"stop","I2G Y35T D90P S147*",4
"lib2","SARS-CoV-2","GACCCGTAGCCAAGGA",2,68.2,9.03,-1.81,0.21,1.57,1.09,0.02,">1 nonsynonymous","L5P S41G D90G Y143M Q163L",5
"lib2","SARS-CoV-2","GACCCGTCTGATACCA",3,63.49,11,0.16,0.07,2.83,1.17,0,">1 nonsynonymous","I2R P54W E154K",3
"lib2","SARS-CoV-2","GACCCGTGATCAACCA",1,2.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACCCGTTAGAACGGG",1,24.19,6,-4.84,1.91,1.5,1.19,0.04,">1 nonsynonymous","C61A L122P R136S P149M",4
"lib2","SARS-CoV-2","GACCCTACACTAAAGT",1,17.25,8.48,-2.36,0.21,1.61,1.1,0.03,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","GACCCTACGAAGACAA",10,16.42,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","S36N F47T V103G A190V",4
"lib2","SARS-CoV-2","GACCCTAGCCCTCCCA",1,10.48,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4I D90K L122K L162G",4
"lib2","SARS-CoV-2","GACCCTATTCATGTAA",3,58.94,9.88,-0.95,0.05,2.95,1.02,0,">1 nonsynonymous","P7E Q176H",2
"lib2","SARS-CoV-2","GACCCTCAAGCCCATT",8,31.43,6,-4.84,2,2.59,1.29,0.04,">1 nonsynonymous","N58M F99D Y123E",3
"lib2","SARS-CoV-2","GACCCTCACATAAATA",10,148.78,9.81,-1.02,0.06,1.98,1.06,0,"1 nonsynonymous","P82K",1
"lib2","SARS-CoV-2","GACCCTCATAATATAA",13,1.64,NA,NA,NA,NA,NA,NA,"stop","T100F N118* Q144L",3
"lib2","SARS-CoV-2","GACCCTCCGGGTCTAC",5,73.61,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K94L Q176R H189S",3
"lib2","SARS-CoV-2","GACCCTCGACTATACT",1,70.18,9.64,-1.2,0.1,1.97,1.03,0,">1 nonsynonymous","V37Y F44G A81V",3
"lib2","SARS-CoV-2","GACCCTGAGCGTGAAC",5,28.64,9.41,-1.42,0.12,1.91,1.07,0.01,">1 nonsynonymous","Y35H D98C P191H",3
"lib2","SARS-CoV-2","GACCCTGCCGGTAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36W C49V L57N I104*",4
"lib2","SARS-CoV-2","GACCCTTAATAAGGGT",2,23.58,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","L38T S45Y N64S R179V",4
"lib2","SARS-CoV-2","GACCCTTAATGCAATA",10,214.31,9.45,-1.39,0.06,1.93,1.09,0,">1 nonsynonymous","F44Y K94G V173A",3
"lib2","SARS-CoV-2","GACCCTTAGCAAAGTA",3,26.55,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","P54S G83V C158G",3
"lib2","SARS-CoV-2","GACCCTTATGCGCTAA",12,3.84,NA,NA,NA,NA,NA,NA,"stop","R27* T55R G86D S129A",4
"lib2","SARS-CoV-2","GACCCTTCAAAGTAGA",4,19.59,10.63,-0.21,0.13,2.75,1.06,0.01,">1 nonsynonymous","S43K C61T A145G",3
"lib2","SARS-CoV-2","GACCCTTCAATTTCTG",1,9.2,7.52,-3.31,0.28,2.28,1.26,0.02,">1 nonsynonymous","C49L I142P",2
"lib2","SARS-CoV-2","GACCCTTCACAAAAGG",5,87.64,10.11,-0.73,0.07,2.07,1.04,0,"1 nonsynonymous","E76G",1
"lib2","SARS-CoV-2","GACCCTTTACTGTACC",1,18.51,10.83,-0.01,0.08,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCCTTTCCTCAACG",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8D R78I T100K F134M S139D",5
"lib2","SARS-CoV-2","GACCGAAAAACGATAA",3,58.45,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","E10I A14E V37A Y50N F62Y A89K G146C N157S G172C",9
"lib2","SARS-CoV-2","GACCGAAAAACTTGAC",2,39.52,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N130R F156R F167V",3
"lib2","SARS-CoV-2","GACCGAAAAATCGCCA",7,51.48,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","Y91N L131D",2
"lib2","SARS-CoV-2","GACCGAAAAGACCGTT",2,21.93,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F8G L131T C158W S184C",4
"lib2","SARS-CoV-2","GACCGAAATATTAAAC",2,8.41,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F8T A14L C61P G155H P191Y",5
"lib2","SARS-CoV-2","GACCGAACTCGAATCG",6,46.9,6.5,-4.34,0.7,1.5,1.24,0.04,">1 nonsynonymous","C61S P96L E154L",3
"lib2","SARS-CoV-2","GACCGAACTTACACTT",1,13.32,10.33,-0.5,0.18,2.64,1,0.01,">1 nonsynonymous","L57S T85K N130K E141R",4
"lib2","SARS-CoV-2","GACCGAAGAACCTACG",2,6.93,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","K56R Y93R L122C",3
"lib2","SARS-CoV-2","GACCGAATAACGGATT",4,0.37,NA,NA,NA,NA,NA,NA,"stop","S19* G51T K56F I88L",4
"lib2","SARS-CoV-2","GACCGAATGGCCTTAT",4,42.96,6,-4.84,2,3,1.08,0,">1 nonsynonymous","N4L L38V G117M D137V",4
"lib2","SARS-CoV-2","GACCGAATTTGATGAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104Q E141S C150S T170V",4
"lib2","SARS-CoV-2","GACCGACATACGTTCT",2,53.68,10.79,-0.05,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCGACGTATTATCT",10,8.79,NA,NA,NA,NA,NA,NA,"stop","N1C A18Q K87* D112L",4
"lib2","SARS-CoV-2","GACCGACTCAGAATTA",4,2.06,NA,NA,NA,NA,NA,NA,"stop","C31G S45D G83Y Y91F N130R T201*",6
"lib2","SARS-CoV-2","GACCGAGAGGGAATCG",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25T T85R V103Y K114V L188F",5
"lib2","SARS-CoV-2","GACCGAGAGTCATCGA",10,200.48,6,-4.84,1.66,1.5,1.11,0,">1 nonsynonymous","P82H D90W Y178K",3
"lib2","SARS-CoV-2","GACCGAGCTCATATAA",6,47.29,9.94,-0.89,0.11,1.84,1.06,0.01,">1 nonsynonymous","A33G T100D",2
"lib2","SARS-CoV-2","GACCGATAACACAGAA",19,144.97,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","I28F A67T G86R",3
"lib2","SARS-CoV-2","GACCGATACAATTTAA",2,71.99,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T63Y N107Y N118D Q176K",4
"lib2","SARS-CoV-2","GACCGATAGTCCGGGC",2,36.76,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","T85G Y91W G101H R127Y Q144F F156Y F167S",7
"lib2","SARS-CoV-2","GACCGATCTGACTCCA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L Y50E D98I E186I",4
"lib2","SARS-CoV-2","GACCGATGATTTCGAA",1,15.4,9.95,-0.88,0.1,2.65,1.02,0.01,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","GACCGATTATTCGTGC",13,95.27,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5P G101W L131S",3
"lib2","SARS-CoV-2","GACCGCAACTAACCTC",6,0.33,NA,NA,NA,NA,NA,NA,"stop","S29R Y178*",2
"lib2","SARS-CoV-2","GACCGCAAGAGAAATA",12,251.94,10.71,-0.12,0.03,2.94,1.08,0,"1 nonsynonymous","V115N",1
"lib2","SARS-CoV-2","GACCGCAGGCAGGAAA",3,31.39,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","S43A D90V N107F",3
"lib2","SARS-CoV-2","GACCGCATTATTCAAA",8,47.66,7.15,-3.69,0.16,1.7,1.16,0.01,">1 nonsynonymous","Y91C E135K Q168E",3
"lib2","SARS-CoV-2","GACCGCCAGACAGGGT",3,46.94,10.05,-0.79,0.1,2.66,1.04,0,">1 nonsynonymous","A42T Y50W A105V",3
"lib2","SARS-CoV-2","GACCGCCGGCATAGTT",3,12.78,9.11,-1.73,0.19,2.46,1.01,0.01,">1 nonsynonymous","F44N D98N V115A L122G G152F",5
"lib2","SARS-CoV-2","GACCGCGAAGATTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N58H G86D I88K L111T G117*",5
"lib2","SARS-CoV-2","GACCGCGGCTACTATT",14,153.63,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S19P N40I K48C F70P F167D P191I",6
"lib2","SARS-CoV-2","GACCGCTAATTACAAC",4,61.85,9.83,-1.01,0.07,2.77,1.07,0,">1 nonsynonymous","E135M E154L K199F",3
"lib2","SARS-CoV-2","GACCGCTTATGCCTCA",5,75.13,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N64D N107L Y165V",3
"lib2","SARS-CoV-2","GACCGCTTCATTGACT",1,44.11,9.72,-1.12,0.1,2.74,1.12,0.01,">1 nonsynonymous","N118L K128H",2
"lib2","SARS-CoV-2","GACCGCTTGATAGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K Y91P N120F N151I",4
"lib2","SARS-CoV-2","GACCGGAGAATGCACA",8,147.6,6,-4.84,1.04,1.5,1.18,0.01,">1 nonsynonymous","D97S D112S F134G K199M",4
"lib2","SARS-CoV-2","GACCGGCAAAGGTAAA",5,97.29,9.62,-1.22,0.09,2.19,1.04,0,">1 nonsynonymous","G83A Y121N",2
"lib2","SARS-CoV-2","GACCGGCACCGGCTAG",11,249.71,10.26,-0.58,0.02,2.9,1.05,0,">1 nonsynonymous","Y35K S129D V173I",3
"lib2","SARS-CoV-2","GACCGGCATAATGCAG",5,31.89,10.85,0.01,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCGGCATCGGCCAG",2,26.48,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G9L G51I Y91S V103A L122A P149S G172F",7
"lib2","SARS-CoV-2","GACCGGCCCTAAGAGA",2,92.41,10.98,0.15,0.06,2.95,1.06,0,"1 nonsynonymous","H189N",1
"lib2","SARS-CoV-2","GACCGGCTTTAGGTCA",14,88.15,9.9,-0.94,0.08,2.51,1.04,0,">1 nonsynonymous","K48R F99I",2
"lib2","SARS-CoV-2","GACCGGGATATGTTTG",14,92.6,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P96S P149N C158S F167L",4
"lib2","SARS-CoV-2","GACCGGGATGAGTCAT",4,18.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15A L95C L122Y Y159L",4
"lib2","SARS-CoV-2","GACCGGGATTTTACAC",5,83.63,10.83,0,0.05,2.8,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCGGGCATGCCCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","T55Y V115T C150M F160L V173*",5
"lib2","SARS-CoV-2","GACCGGGCGGTGACAG",8,57.77,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C61K N107T G117V V173R",4
"lib2","SARS-CoV-2","GACCGGGTGAAGACCC",6,84.5,9.91,-0.93,0.08,2.4,1.08,0,">1 nonsynonymous","V37I V115F E135K",3
"lib2","SARS-CoV-2","GACCGGGTTGTGCAAA",7,3.08,NA,NA,NA,NA,NA,NA,"stop","P133* Q144Y P177N",3
"lib2","SARS-CoV-2","GACCGGTAAAGTCAGC",7,0.53,NA,NA,NA,NA,NA,NA,"stop","R16N G86K K128S S139L S184*",5
"lib2","SARS-CoV-2","GACCGTACGGCATGGC",11,2.36,NA,NA,NA,NA,NA,NA,"stop","F12* I88N",2
"lib2","SARS-CoV-2","GACCGTACTCATCAAT",10,72.84,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32A A89E W106V",3
"lib2","SARS-CoV-2","GACCGTATCTCAGACA",1,6.23,10.69,-0.15,0.12,2.98,1,0,">1 nonsynonymous","I2M F156H T201K",3
"lib2","SARS-CoV-2","GACCGTGAGTTTATTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36F K87D",2
"lib2","SARS-CoV-2","GACCGTGGCTCCGCTG",14,9.97,NA,NA,NA,NA,NA,NA,"stop","P54* N92R",2
"lib2","SARS-CoV-2","GACCGTGTATCGAACA",4,28.98,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N118S Y143L E154L Q168L",4
"lib2","SARS-CoV-2","GACCGTTAACAACATA",2,12.16,10.73,-0.11,0.09,3,1.01,0,"1 nonsynonymous","Q84K",1
"lib2","SARS-CoV-2","GACCGTTAAGAACTTT",4,99.3,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","GACCGTTGAGTTCGAA",6,29.28,6.64,-4.19,0.45,1.5,1.15,0.03,">1 nonsynonymous","A14V P82V E141V P149G",4
"lib2","SARS-CoV-2","GACCGTTTAAGTGCTC",10,90.05,6.46,-4.37,0.48,1.5,1.19,0.02,">1 nonsynonymous","E10Q Y35T F167L",3
"lib2","SARS-CoV-2","GACCGTTTCGACCCAT",7,114.56,10.86,0.03,0.05,2.99,1.03,0,"1 nonsynonymous","D59E",1
"lib2","SARS-CoV-2","GACCTAAAAGAAATAT",3,23.06,9.86,-0.98,0.08,3,1.04,0,">1 nonsynonymous","T3V G116E G174E",3
"lib2","SARS-CoV-2","GACCTAAACAGCAACA",6,71.25,10.87,0.03,0.05,2.85,1.17,0,">1 nonsynonymous","V37M F160N",2
"lib2","SARS-CoV-2","GACCTAACCGCTTGTA",9,41.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25A K56L P96H G172S",4
"lib2","SARS-CoV-2","GACCTAACGTCTGCAG",4,92.58,10.41,-0.42,0.04,2.84,1.09,0,"1 nonsynonymous","E186I",1
"lib2","SARS-CoV-2","GACCTAACTAATGGGA",2,7.34,9.1,-1.74,0.3,1.53,1.5,0.04,">1 nonsynonymous","R16E S45C N58L S129A K199C",5
"lib2","SARS-CoV-2","GACCTAAGAATCAAAG",2,22.55,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I88F Y123H G174R K198Q",4
"lib2","SARS-CoV-2","GACCTAAGAGGCCAAC",3,40.86,6.58,-4.25,0.16,2.19,1.13,0,">1 nonsynonymous","P7V T85S F126G F156Y",4
"lib2","SARS-CoV-2","GACCTAAGATGCCTCC",1,0.94,NA,NA,NA,NA,NA,NA,"stop","C61R R127T V180*",3
"lib2","SARS-CoV-2","GACCTAAGGAAGGTAT",3,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T P149N Q168L",3
"lib2","SARS-CoV-2","GACCTAAGTCGACTTC",7,100.26,10.53,-0.31,0.03,2.93,1.06,0,">1 nonsynonymous","L5F S129C S164R T170W",4
"lib2","SARS-CoV-2","GACCTAAGTTTATAGA",7,16.17,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","I104L R179L K199T",3
"lib2","SARS-CoV-2","GACCTAATCTCAGCAT",2,11.33,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","W106D Q176E V182F",3
"lib2","SARS-CoV-2","GACCTAATGATTAGAC",2,37.96,10.82,-0.02,0.06,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GACCTAATTACTTCAA",5,24.89,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","L57N D68T G101P T148N",4
"lib2","SARS-CoV-2","GACCTACAAACCCCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92L W106S C158S",3
"lib2","SARS-CoV-2","GACCTACAAACTAATC",7,156.54,10.77,-0.07,0.03,2.92,1.07,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","GACCTACACAGATTCA",2,11.57,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y50L V181L",2
"lib2","SARS-CoV-2","GACCTACCGAACGAAG",5,22.34,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G51V A89L Y123N P149Q",4
"lib2","SARS-CoV-2","GACCTACGTTAGCCAC",9,4.25,NA,NA,NA,NA,NA,NA,"stop","I2A T55L D98T Q144S N151S F156T G174* L183I",8
"lib2","SARS-CoV-2","GACCTACTAACCCCAT",6,26.96,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P7L T15I S41Y P177R",4
"lib2","SARS-CoV-2","GACCTAGAACGTGAGC",4,52.7,10.17,-0.67,0.06,2.92,1.06,0,">1 nonsynonymous","Y119R K132R",2
"lib2","SARS-CoV-2","GACCTAGAAGCAAAAG",7,108.37,10.7,-0.14,0.04,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCTAGACACTGTAG",1,73.1,10.32,-0.52,0.06,2.79,1.11,0,">1 nonsynonymous","A33G K56F",2
"lib2","SARS-CoV-2","GACCTAGACATATCCA",2,29.13,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","P82A G101L N107L D137M Y143F",5
"lib2","SARS-CoV-2","GACCTAGACCCTAGTA",6,133.28,9.93,-0.9,0.05,2.45,1.03,0,">1 nonsynonymous","F44T S129L",2
"lib2","SARS-CoV-2","GACCTAGCAAGATCCT",2,33.57,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C6T A18V S43A G51S E135V Q163S",6
"lib2","SARS-CoV-2","GACCTAGCATTCATAA",5,77.3,10.79,-0.05,0.07,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCTAGGCCACCCAT",7,83.22,10.81,-0.03,0.06,2.9,1.09,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","GACCTAGGCCCTCGTA",4,9.21,NA,NA,NA,NA,NA,NA,"stop","V37L G51D K94* Y178T",4
"lib2","SARS-CoV-2","GACCTAGTAATGTTGG",10,86.08,9,-1.84,0.08,1.64,1.08,0,">1 nonsynonymous","F12C N64M",2
"lib2","SARS-CoV-2","GACCTATAGACACACG",6,66.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9V D34K G86K E154H H189D C195G",6
"lib2","SARS-CoV-2","GACCTATAGATACGTG",5,7.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89N P149Y",2
"lib2","SARS-CoV-2","GACCTATATCCGGGGT",12,209.47,10.85,0.02,0.05,2.96,1.06,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","GACCTATATGCCGCAA",2,50.34,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","K56T T63H A81K G101I E135V N151P N171M",7
"lib2","SARS-CoV-2","GACCTATATGGTTTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* K87I T140S",3
"lib2","SARS-CoV-2","GACCTATCAAACCAAG",3,21.57,10.83,0,0.08,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCTATCACCAACCG",6,3.31,NA,NA,NA,NA,NA,NA,"stop","C61L T85* N157P",3
"lib2","SARS-CoV-2","GACCTATCCATGACTC",2,20.64,6.32,-4.52,0.3,2.08,1.08,0.01,">1 nonsynonymous","L162E K198F",2
"lib2","SARS-CoV-2","GACCTATCGGTCAAAC",2,16.31,9.98,-0.86,0.16,2.29,1.07,0.02,">1 nonsynonymous","F17L I142M",2
"lib2","SARS-CoV-2","GACCTATTAAATGTGT",7,148.18,10.28,-0.55,0.04,2.8,1.07,0,">1 nonsynonymous","N4L L60R",2
"lib2","SARS-CoV-2","GACCTATTAATTTTGA",16,78.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3W D59V F167M A190E",4
"lib2","SARS-CoV-2","GACCTATTCCTCGGGA",1,63.35,9.69,-1.15,0.05,2.87,1.09,0,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","GACCTCAATATAGGTT",5,72.59,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","Y39P Y119M E135T Q168K",4
"lib2","SARS-CoV-2","GACCTCAATGACGTTT",25,551.65,9.66,-1.18,0.02,2.9,1.07,0,">1 nonsynonymous","Y35W T148C G152I",3
"lib2","SARS-CoV-2","GACCTCACAGCTAAAC",15,80.6,8.72,-2.11,0.08,1.92,1.07,0,">1 nonsynonymous","A14L S147Y G155R Q163R",4
"lib2","SARS-CoV-2","GACCTCACGCTATGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V115S S164*",2
"lib2","SARS-CoV-2","GACCTCAGCCGATGTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","V32K A42* A105V R136F Y178G",5
"lib2","SARS-CoV-2","GACCTCATATACGAAA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","F8T F17* T55* V77* L188I",5
"lib2","SARS-CoV-2","GACCTCATCCCTAGAG",1,6.06,9.82,-1.02,0.17,2.13,1,0.01,">1 nonsynonymous","T15Q T100N G155C",3
"lib2","SARS-CoV-2","GACCTCATGTGTCCTT",7,51.24,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I2L N40P C49N T55F",4
"lib2","SARS-CoV-2","GACCTCCAAACATAAA",3,60.51,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L95S L122S E135G R136S P149L",5
"lib2","SARS-CoV-2","GACCTCCCTACACACG",16,8.73,NA,NA,NA,NA,NA,NA,"stop","F17K D34R A105T I142*",4
"lib2","SARS-CoV-2","GACCTCCGATCTTCCC",8,103.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P82G R127D",2
"lib2","SARS-CoV-2","GACCTCGCCACGCTTT",2,46.61,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V11S S45W C61N D97M N107K F156C",6
"lib2","SARS-CoV-2","GACCTCGGAGATCGCT",9,173.31,10.75,-0.09,0.06,2.87,1.15,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","GACCTCGGGACAATAT",3,33.44,8.63,-2.21,0.31,1.5,1.08,0.03,">1 nonsynonymous","Y91C E135K",2
"lib2","SARS-CoV-2","GACCTCGTAATATGTA",6,75.56,9.23,-1.6,0.06,2.09,1.03,0,">1 nonsynonymous","S139F Q144T",2
"lib2","SARS-CoV-2","GACCTCTAGGATAAGT",4,13.55,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","N1R D68T P82S",3
"lib2","SARS-CoV-2","GACCTCTCTGACCCAA",19,354.32,9.97,-0.87,0.04,2.81,1.06,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","GACCTCTGACTTATGC",8,49.96,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5N E10M N58K G83I K128C",5
"lib2","SARS-CoV-2","GACCTCTGTGTACGCG",2,22.59,6.25,-4.59,0.71,1.5,1.21,0.03,">1 nonsynonymous","W106Q E135R",2
"lib2","SARS-CoV-2","GACCTCTTACAAAAAA",3,18.83,6,-4.84,0.79,1.92,1.06,0,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","GACCTGAAAAAGACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","K48F R78M Q84* N151L A192Q",5
"lib2","SARS-CoV-2","GACCTGAAAGTGAACA",8,128.15,9.67,-1.17,0.04,2.83,1.09,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","GACCTGAACTAAACAG",1,6.07,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","L38P T85I C158R",3
"lib2","SARS-CoV-2","GACCTGAATAACTCTG",13,4.8,NA,NA,NA,NA,NA,NA,"stop","S43G I72*",2
"lib2","SARS-CoV-2","GACCTGAATACTTATT",3,5.4,10.79,-0.04,0.17,2.84,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACCTGAGACAATGCC",2,58.09,6.74,-4.1,0.5,1.5,1.23,0.02,">1 nonsynonymous","C31R K132P P149L",3
"lib2","SARS-CoV-2","GACCTGAGGTACACCC",2,17.14,9.79,-1.04,0.04,2.96,1.05,0,">1 nonsynonymous","F62T T170H",2
"lib2","SARS-CoV-2","GACCTGAGTCCTCTGC",2,27.53,10.15,-0.69,0.43,2.41,1.13,0.07,">1 nonsynonymous","E10A L125A V173H",3
"lib2","SARS-CoV-2","GACCTGATTTAAATTC",3,15.49,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P82G N107T K114I N120Q",4
"lib2","SARS-CoV-2","GACCTGCATTTCAGCC",7,7.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13T W106C P133R P149H",4
"lib2","SARS-CoV-2","GACCTGCCCCGGGCGA",6,72.83,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V20E I80Q R124A I142M",4
"lib2","SARS-CoV-2","GACCTGCTTGTTAAAG",4,0.25,NA,NA,NA,NA,NA,NA,"stop","Q79*",1
"lib2","SARS-CoV-2","GACCTGGAACTAAAAT",4,24.6,6.27,-4.56,0.55,3,1.17,0.02,">1 nonsynonymous","A33K L38I G74M P149Q Q176R A192T",6
"lib2","SARS-CoV-2","GACCTGGCGGGGCACA",4,19.72,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A89N L95H",2
"lib2","SARS-CoV-2","GACCTGGTTACCTACC",5,83.36,8.83,-2.01,0.07,2.23,1.06,0,">1 nonsynonymous","N118L S129Y",2
"lib2","SARS-CoV-2","GACCTGGTTGTAAGAA",1,107.11,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6D Y121A Q168K Q176G",4
"lib2","SARS-CoV-2","GACCTGTGCAGCATCC",2,14.53,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F62D C150S",2
"lib2","SARS-CoV-2","GACCTTAAAACCAGTG",4,31.6,10.04,-0.79,0.11,2.41,1.02,0,"1 nonsynonymous","F8T",1
"lib2","SARS-CoV-2","GACCTTAAACACCAAG",4,105.51,10.27,-0.56,0.06,2.73,1.05,0,">1 nonsynonymous","N1L G9Y T46E C61E",4
"lib2","SARS-CoV-2","GACCTTAACATGGATA",3,45.76,8.95,-1.89,0.17,1.5,1.07,0.01,">1 nonsynonymous","K26W A42M S129L N151W V173H",5
"lib2","SARS-CoV-2","GACCTTAATTGGCAAA",9,28.91,6.03,-4.81,1.01,1.5,1.17,0.02,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","GACCTTACAAACCTAT",4,69.81,10.84,0,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCTTAGCAATATCG",17,171.07,10.83,-0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACCTTATAAACTACG",6,42.38,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C49L D98L I104L",3
"lib2","SARS-CoV-2","GACCTTCAACCTAGCA",10,0.09,NA,NA,NA,NA,NA,NA,"stop","S45* D97N N110I E141V",4
"lib2","SARS-CoV-2","GACCTTCCAAGGCCTG",9,1.06,NA,NA,NA,NA,NA,NA,"stop","F62L F70E N92*",3
"lib2","SARS-CoV-2","GACCTTCGAAGTTGTA",3,59.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A81M K94V R127L Y143S G166V",5
"lib2","SARS-CoV-2","GACCTTCGTACGCCCT",1,33.07,8.82,-2.02,0.25,1.7,1.05,0.02,">1 nonsynonymous","I2A W106I E135A F156L",4
"lib2","SARS-CoV-2","GACCTTCTAATACTGA",3,10.64,10.58,-0.25,0.14,2.7,1.28,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACCTTCTGACCTTTT",5,61.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36T W106M Q144L R179N",4
"lib2","SARS-CoV-2","GACCTTGAAAGGGACC",1,8.95,6,-4.84,0.78,3,1.05,0.01,">1 nonsynonymous","A81R S113V F134M T170I",4
"lib2","SARS-CoV-2","GACCTTGATGCATGTC",3,40.97,9.77,-1.07,0.05,2.69,1,0,">1 nonsynonymous","K56M N92S",2
"lib2","SARS-CoV-2","GACCTTTCCTCCGAGA",4,13.88,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V11A Y121A L183S K199I",4
"lib2","SARS-CoV-2","GACCTTTCCTGCTCAG",1,7.75,10.74,-0.1,0.21,2.66,1.27,0.01,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","GACCTTTCGAGCCCTC",1,5.62,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","A105D Y121A",2
"lib2","SARS-CoV-2","GACCTTTCTACGAACT",4,40.98,8.4,-2.44,0.11,2.95,1.08,0,">1 nonsynonymous","L60F F126R F156V",3
"lib2","SARS-CoV-2","GACCTTTCTTAACGCG",2,12.86,6,-4.84,2,2.47,1.2,0.01,">1 nonsynonymous","F99V S139I Q144G",3
"lib2","SARS-CoV-2","GACCTTTTGCTCGACA",4,178.72,9.16,-1.68,0.1,2.75,1.14,0,">1 nonsynonymous","E10K D98N N120T K198M",4
"lib2","SARS-CoV-2","GACCTTTTTTGCCAGT",10,119.89,10.75,-0.08,0.04,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GACGAAAAAACAACTT",4,16.55,10.77,-0.06,0.07,2.97,1.07,0,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","GACGAAAACTGGTGGG",5,94.06,10.76,-0.07,0.03,2.97,1.05,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GACGAAAAGCCGGATC",13,211.99,10.85,0.02,0.04,2.97,1.06,0,"1 nonsynonymous","S139T",1
"lib2","SARS-CoV-2","GACGAAAATACTGATC",7,14.23,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","Y39S S45C C49K G86L N110L",5
"lib2","SARS-CoV-2","GACGAAAATAGCACTG",2,9.66,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","Y93G E135W S139N K198L",4
"lib2","SARS-CoV-2","GACGAAAATATAAGCT",3,11.72,6.18,-4.66,0.71,1.5,1.02,0.01,">1 nonsynonymous","E10M A81K C102P F160A H189Y",5
"lib2","SARS-CoV-2","GACGAAAATTCCCTGC",2,13.99,7.49,-3.35,0.17,2.28,1.1,0.01,">1 nonsynonymous","N13Y N120K L125P F160I",4
"lib2","SARS-CoV-2","GACGAAACGGTTGATA",18,244.68,10.7,-0.13,0.03,2.97,1.04,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","GACGAAACTCAACTAA",4,1.04,NA,NA,NA,NA,NA,NA,"stop","S19M P54* S129L",3
"lib2","SARS-CoV-2","GACGAAAGGCAACCGA",6,80.38,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","Y21Q Y39K N107P N157L",4
"lib2","SARS-CoV-2","GACGAAATATACACAC",10,60.93,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D59R L131R G166I",3
"lib2","SARS-CoV-2","GACGAAATGAGTTTGT",11,3.82,NA,NA,NA,NA,NA,NA,"stop","I2D N24L K56E A105R L122T V173* V194I",7
"lib2","SARS-CoV-2","GACGAACACGACTCGT",5,48.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V65E N107S L111I Y123G F160T T201G",6
"lib2","SARS-CoV-2","GACGAACACGGCAAAA",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92S N107T S139H S184W",4
"lib2","SARS-CoV-2","GACGAACACTATTATG",12,135.01,10.51,-0.33,0.03,2.88,1.08,0,">1 nonsynonymous","R16V N64S D98L",3
"lib2","SARS-CoV-2","GACGAACAGTCTCGAG",6,22.81,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S41E F99S Y119V",3
"lib2","SARS-CoV-2","GACGAACATAAACTGG",7,60.98,9.31,-1.53,0.06,2.89,1.14,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","GACGAACATGGCCAGG",3,39.96,10.87,0.04,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGAACCAACGTCAT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","S41R T63* F134W E141Y R179V",5
"lib2","SARS-CoV-2","GACGAACGAAAGGCCC",4,109.17,9.81,-1.03,0.06,2.16,1.07,0,">1 nonsynonymous","V77R A145S",2
"lib2","SARS-CoV-2","GACGAACGAGTCATCT",1,29.39,10.53,-0.3,0.06,2.87,1.2,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","GACGAACTAAAGCAGG",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M D90S L95R",3
"lib2","SARS-CoV-2","GACGAACTTGTCCACT",6,142.34,10.1,-0.74,0.08,2.24,1.04,0,">1 nonsynonymous","D34L N120E",2
"lib2","SARS-CoV-2","GACGAAGAATCACTTC",2,14.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9I F99S N151F",3
"lib2","SARS-CoV-2","GACGAAGAATGCAGAT",2,38.16,9.56,-1.27,0.12,1.92,1.02,0.01,">1 nonsynonymous","L60P P96N",2
"lib2","SARS-CoV-2","GACGAAGCATTGGGGA",13,119.57,8.41,-2.42,0.1,1.86,1.1,0,">1 nonsynonymous","V11R T170Q",2
"lib2","SARS-CoV-2","GACGAAGTGCTCTTCA",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L S41K A81V K94N",4
"lib2","SARS-CoV-2","GACGAAGTGTAAACTA",9,115.15,10.76,-0.07,0.09,2.8,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGAAGTTTAAGAGA",6,50,6,-4.84,1.08,1.5,1.14,0.02,">1 nonsynonymous","V77G N120S",2
"lib2","SARS-CoV-2","GACGAATAACACCAGG",5,30.44,7.54,-3.3,0.19,1.71,1.15,0.01,">1 nonsynonymous","D90G G116C F156L S200V",4
"lib2","SARS-CoV-2","GACGAATACATATCAT",2,1.56,NA,NA,NA,NA,NA,NA,"stop","E135* C150F",2
"lib2","SARS-CoV-2","GACGAATATTGTCATA",9,0.53,NA,NA,NA,NA,NA,NA,"stop","T3K K87T P96* D112F Y119* P169G",6
"lib2","SARS-CoV-2","GACGAATCACATTATG",4,59.4,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","P82L N120S Y165F",3
"lib2","SARS-CoV-2","GACGAATCATAACAGG",7,1.73,NA,NA,NA,NA,NA,NA,"stop","E76* Y175R",2
"lib2","SARS-CoV-2","GACGAATCCAGTGGTG",5,46.5,8.05,-2.78,0.11,2.55,1.08,0,">1 nonsynonymous","G146L S184T",2
"lib2","SARS-CoV-2","GACGAATCCCACTTGC",1,20.98,10.78,-0.06,0.05,2.92,1.1,0,"1 nonsynonymous","T15Q",1
"lib2","SARS-CoV-2","GACGAATCTTTATAAT",9,87.2,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","E10Y D112H",2
"lib2","SARS-CoV-2","GACGAATGCAACCCTT",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58A R73F Y175G",3
"lib2","SARS-CoV-2","GACGAATGTCCCATAT",1,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120D T140R E154C",3
"lib2","SARS-CoV-2","GACGAATGTGGGATTA",2,78.62,10.66,-0.18,0.02,2.96,1.03,0,">1 nonsynonymous","K114I V153S",2
"lib2","SARS-CoV-2","GACGAATGTTTAAAAC",6,96.68,9.91,-0.92,0.03,2.87,1.11,0,"1 nonsynonymous","P169W",1
"lib2","SARS-CoV-2","GACGAATTAAGCATCT",5,32.49,8.36,-2.47,0.26,1.61,1.27,0.02,">1 nonsynonymous","D97L E135W G146A G174K",4
"lib2","SARS-CoV-2","GACGAATTACTAGATA",1,23.64,10.57,-0.27,0.08,2.96,1.05,0,">1 nonsynonymous","S43A D97S K114E",3
"lib2","SARS-CoV-2","GACGAATTGGACTTAC",6,69.39,9.86,-0.98,0.12,2.44,1.16,0.01,">1 nonsynonymous","N110D V173P",2
"lib2","SARS-CoV-2","GACGACAAATAAGTAG",11,89.81,11.12,0.28,0.05,2.96,1.04,0,">1 nonsynonymous","Y123F N130S",2
"lib2","SARS-CoV-2","GACGACAATTAAATAG",1,47.71,10.78,-0.06,0.03,2.94,1.07,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","GACGACACCAATATAG",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y I88K G146S G155P",4
"lib2","SARS-CoV-2","GACGACACTAGAAAAC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACGACACTCACAATC",1,0.58,NA,NA,NA,NA,NA,NA,"stop","T15W Y39F Q84* D90H",4
"lib2","SARS-CoV-2","GACGACAGAAACCCGG",3,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T N130Q E135L Y178I",4
"lib2","SARS-CoV-2","GACGACAGGACCCAAA",5,42.36,8.6,-2.24,0.26,1.5,1.04,0.03,">1 nonsynonymous","K48Y S69M L183I",3
"lib2","SARS-CoV-2","GACGACATACTATGCG",3,2.22,NA,NA,NA,NA,NA,NA,"stop","C6T A14* V65N P149S F185P",5
"lib2","SARS-CoV-2","GACGACATTTTACAAT",8,115.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I88L K132P F167Y",3
"lib2","SARS-CoV-2","GACGACCACAACACAA",4,24.28,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K114W G155L P161F",3
"lib2","SARS-CoV-2","GACGACCACCTCTGAA",1,11.66,9.49,-1.35,0.13,1.92,1,0,">1 nonsynonymous","L38K T55S D97S",3
"lib2","SARS-CoV-2","GACGACCAGCGCGCGC",1,22.2,8.61,-2.23,0.19,1.92,1.14,0.02,">1 nonsynonymous","N107V T170A",2
"lib2","SARS-CoV-2","GACGACCCCAAGCTTG",13,142.82,9.53,-1.31,0.04,2.9,1.1,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","GACGACCTATACTACA",4,5.03,NA,NA,NA,NA,NA,NA,"stop","G9* K48L K56V",3
"lib2","SARS-CoV-2","GACGACCTTAATAAAC",1,2.19,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACGACCTTATACCAT",6,53.72,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","GACGACCTTGCAACAG",1,21.7,10.74,-0.09,0.11,2.81,1.17,0.01,">1 nonsynonymous","I2P N64H",2
"lib2","SARS-CoV-2","GACGACGAAATTATTG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","G9S C49F K56W D68A G146*",5
"lib2","SARS-CoV-2","GACGACGAACTTAGTA",1,13.83,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33P C49Y I142M R179G S184K",5
"lib2","SARS-CoV-2","GACGACGCAGAGATTG",27,93.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F S129L I142S",3
"lib2","SARS-CoV-2","GACGACGGTTAATACA",5,34.93,9.5,-1.34,0.07,2.04,1.01,0,">1 nonsynonymous","L5M A14Y T55L C195N",4
"lib2","SARS-CoV-2","GACGACTAGACGGTTC",8,64.98,9.81,-1.03,0.06,1.98,1.08,0,">1 nonsynonymous","L38H E154S",2
"lib2","SARS-CoV-2","GACGACTATAACTACT",2,31.58,6,-4.84,2,2.1,1.17,0.02,">1 nonsynonymous","G9Q L38S C61R A81P",4
"lib2","SARS-CoV-2","GACGACTATCTCAAAC",3,31.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86N Y119F L131K",3
"lib2","SARS-CoV-2","GACGACTATTAAGGGC",4,29.61,10.52,-0.32,0.14,2.82,1.09,0.01,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","GACGACTCTACCATCC",1,0.29,NA,NA,NA,NA,NA,NA,"stop","I2* I28M A42T K87L R127V",5
"lib2","SARS-CoV-2","GACGACTTATACATGG",3,70.72,10.8,-0.04,0.04,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GACGACTTGGACGGTG",6,45.04,7.85,-2.98,0.3,1.5,1.03,0.04,">1 nonsynonymous","R16G P82Q",2
"lib2","SARS-CoV-2","GACGACTTTCATGAGC",5,87.23,8.87,-1.96,0.08,2.89,1.08,0,">1 nonsynonymous","D98Y G166T",2
"lib2","SARS-CoV-2","GACGAGAAGTAATATC",3,23.29,9.06,-1.78,0.09,2.7,1.09,0,">1 nonsynonymous","A67L R73M N151F F160V K199M",5
"lib2","SARS-CoV-2","GACGAGACATGACGAG",3,46.6,10.48,-0.36,0.07,2.88,1.11,0,">1 nonsynonymous","K56I D98S",2
"lib2","SARS-CoV-2","GACGAGACCAAATAGT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D S69P D90G P177Q",4
"lib2","SARS-CoV-2","GACGAGACCAACTAAT",6,127.78,6.68,-4.16,0.36,1.5,1.17,0.02,">1 nonsynonymous","G83D Q176C",2
"lib2","SARS-CoV-2","GACGAGACTACTTCTA",5,153.23,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N4C N40G N92L N118P",4
"lib2","SARS-CoV-2","GACGAGAGCCTAACCG",10,48.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L I88L V103H S147T",4
"lib2","SARS-CoV-2","GACGAGCAAGTTCATT",2,16.03,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R73A Q79V P149I G172S",4
"lib2","SARS-CoV-2","GACGAGCCGGCGTCTA",4,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A T148Q C158V G166T",4
"lib2","SARS-CoV-2","GACGAGCGATAAGCTT",6,0.07,NA,NA,NA,NA,NA,NA,"stop","L57Q E135* G146C",3
"lib2","SARS-CoV-2","GACGAGCTTCTAGTTA",4,52.21,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2T I28M T100K F126R E154L G166M",6
"lib2","SARS-CoV-2","GACGAGGACATGACCG",5,31.82,6.35,-4.49,0.25,2.2,1.06,0,">1 nonsynonymous","G51H K56W F99M I142L",4
"lib2","SARS-CoV-2","GACGAGGAGCGAACTG",1,5.42,8.8,-2.04,0.2,2.76,1.3,0.01,">1 nonsynonymous","E141W P149C",2
"lib2","SARS-CoV-2","GACGAGGGAACAATCT",8,183.74,10.13,-0.7,0.04,2.81,1.02,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","GACGAGGGAATCATGG",1,16.72,10.66,-0.18,0.08,3,1,0,">1 nonsynonymous","K48R T63N T100S",3
"lib2","SARS-CoV-2","GACGAGGGATCTTCCG",10,2.61,NA,NA,NA,NA,NA,NA,"stop","S36P A89W L122* R136L",4
"lib2","SARS-CoV-2","GACGAGTACCTTATTG",8,91.64,10.57,-0.26,0.06,2.9,1.07,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GACGAGTCAAATGAAA",5,67.14,6,-4.84,1.38,1.5,1.12,0,">1 nonsynonymous","Y93T G117C",2
"lib2","SARS-CoV-2","GACGAGTCCTGTTTAG",1,38.76,10.9,0.07,0.08,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GACGAGTCGGACTGCC",3,57.07,10.31,-0.53,0.06,2.86,1.04,0,">1 nonsynonymous","F62N F160L",2
"lib2","SARS-CoV-2","GACGAGTCGTAACTCT",2,37.24,10.82,-0.01,0.03,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGAGTCTTGGGAAC",6,46.61,10.64,-0.19,0.1,2.85,1.14,0,">1 nonsynonymous","Y143H K199S",2
"lib2","SARS-CoV-2","GACGAGTGCACCAAAA",10,15.98,NA,NA,NA,NA,NA,NA,"stop","T46S D112N G117S Y159* P177S",5
"lib2","SARS-CoV-2","GACGAGTTCATTATTT",7,122.06,10.85,0.01,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGATACAAGTCAGT",1,26.47,10.7,-0.13,0.03,3,1,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","GACGATACACCGACTC",4,0.07,NA,NA,NA,NA,NA,NA,"stop","T85*",1
"lib2","SARS-CoV-2","GACGATACCCTCCGAT",5,1.6,NA,NA,NA,NA,NA,NA,"stop","Y39* D98T W106E V173L",4
"lib2","SARS-CoV-2","GACGATACGAACACCG",1,14.77,10.41,-0.42,0.15,2.84,1.03,0.01,"1 nonsynonymous","I72W",1
"lib2","SARS-CoV-2","GACGATACGCATGTGC",2,20.84,10.05,-0.79,0.12,2.35,1.02,0.01,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","GACGATACTAATATAC",2,44.38,8.58,-2.26,0.1,3,1.05,0,">1 nonsynonymous","S36D T170I",2
"lib2","SARS-CoV-2","GACGATACTGACATCG",2,7.43,8.17,-2.67,0.25,1.5,1.1,0.05,">1 nonsynonymous","R127S F134R A192K",3
"lib2","SARS-CoV-2","GACGATAGCAGTTAAG",3,1.75,NA,NA,NA,NA,NA,NA,"stop","F8R W23* N24V W106G",4
"lib2","SARS-CoV-2","GACGATAGGGGTCGGC",4,46.59,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C6A R27W Y50C",3
"lib2","SARS-CoV-2","GACGATATTTTGCTAT",11,129.87,10.93,0.09,0.07,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGATCAAATTTTGC",1,1.29,NA,NA,NA,NA,NA,NA,"stop","C6E P54M G86* Q144D P161Y",5
"lib2","SARS-CoV-2","GACGATCAATAGTTAG",4,56.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D98G N120P R136W F160W T201R",5
"lib2","SARS-CoV-2","GACGATCACTTATGCA",4,21.22,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50T A105F K128I Q168M",4
"lib2","SARS-CoV-2","GACGATCATATTTCAA",2,28.66,10.79,-0.05,0.07,2.98,1.05,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","GACGATCTAGCCACAC",16,233.13,10.62,-0.21,0.03,2.86,1.07,0,">1 nonsynonymous","G83L S139N",2
"lib2","SARS-CoV-2","GACGATCTTACTGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","GACGATCTTTACAAGG",3,60.67,10.69,-0.15,0.06,2.98,1.04,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","GACGATGCGTACGTCC",5,89.66,10.88,0.04,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGATGGATATCACC",1,49.04,10.54,-0.29,0.05,2.98,1.04,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","GACGATGTACAGTTAC",1,13.6,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","R27T Y93D R127L I138A T148K",5
"lib2","SARS-CoV-2","GACGATGTATGTAATA",14,180.66,9.99,-0.85,0.05,2.86,1.11,0,"1 nonsynonymous","N118T",1
"lib2","SARS-CoV-2","GACGATTACACACAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R G117L K132L",3
"lib2","SARS-CoV-2","GACGATTACAGTTATA",1,13.6,7.9,-2.94,0.41,1.72,1.15,0.06,">1 nonsynonymous","R179M T201L",2
"lib2","SARS-CoV-2","GACGATTCAGATAGGT",8,74.33,9.89,-0.95,0.11,2.32,1.06,0.01,">1 nonsynonymous","F17Y D90T",2
"lib2","SARS-CoV-2","GACGATTCTCCAAGTT",1,59.85,9.92,-0.92,0.13,1.99,1,0.01,">1 nonsynonymous","N58L W106M",2
"lib2","SARS-CoV-2","GACGATTGTGAAAATT",5,200.4,10.64,-0.19,0.03,2.92,1.08,0,">1 nonsynonymous","P149N S164C",2
"lib2","SARS-CoV-2","GACGATTTAGTAACAA",5,13.31,10.2,-0.63,0.08,2.84,1.14,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","GACGCAAAAGCTAAAT",8,158.94,10.1,-0.73,0.04,2.72,1.1,0,">1 nonsynonymous","T100S T148A G155T",3
"lib2","SARS-CoV-2","GACGCAAAATTAGGTA",10,4.39,NA,NA,NA,NA,NA,NA,"stop","T3K G166C G172*",3
"lib2","SARS-CoV-2","GACGCAAATATACAAA",11,185.72,10.04,-0.8,0.05,2.38,1.02,0,">1 nonsynonymous","V20S T201R",2
"lib2","SARS-CoV-2","GACGCAAGATAAATAG",1,37.01,10.87,0.04,0.07,2.91,1.1,0,">1 nonsynonymous","T15S K128A P197Q",3
"lib2","SARS-CoV-2","GACGCAAGGAAGGAAG",19,133.83,8.85,-1.98,0.09,1.81,1.11,0,">1 nonsynonymous","N107V E186S",2
"lib2","SARS-CoV-2","GACGCAAGTAACTCTA",5,22.44,7.34,-3.5,0.29,1.5,1.18,0.02,">1 nonsynonymous","N13A Y39W F44M A105G",4
"lib2","SARS-CoV-2","GACGCAAGTTCTTGGA",1,10.32,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","N4G R127T N151L F156Y",4
"lib2","SARS-CoV-2","GACGCAATACGTGAGC",3,56.64,10.86,0.02,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGCACAACAGACAA",1,29.83,10.48,-0.36,0.08,2.91,1.07,0,">1 nonsynonymous","S29H D59N Y123Q N130R",4
"lib2","SARS-CoV-2","GACGCACCCAAGATTA",4,61.42,10.38,-0.46,0.06,2.98,1.03,0,">1 nonsynonymous","G83E Q144A",2
"lib2","SARS-CoV-2","GACGCACCCCCGATCA",1,15.84,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","K87M G101E",2
"lib2","SARS-CoV-2","GACGCACCCTTTGTAT",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128R F185S",2
"lib2","SARS-CoV-2","GACGCACCTTAGAACC",1,5.93,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","D68L T85L Y143G Q144K",4
"lib2","SARS-CoV-2","GACGCACGAGTTTTTG",10,7.56,9.62,-1.21,0.33,1.5,1,0.06,">1 nonsynonymous","G116V L183E",2
"lib2","SARS-CoV-2","GACGCACTCCAGGAAA",11,44.46,6.03,-4.81,1.67,1.5,1.19,0.04,">1 nonsynonymous","T15D L95Y Y119L",3
"lib2","SARS-CoV-2","GACGCAGAATCATGAC",2,26.9,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A105L S113T Y123V T140R",4
"lib2","SARS-CoV-2","GACGCAGATAAAAGCC",3,14.27,6,-4.84,1.5,3,1.04,0.01,">1 nonsynonymous","L95M G101D Y123L N130M P177M",5
"lib2","SARS-CoV-2","GACGCAGGCACAATAT",6,68.43,9.78,-1.06,0.07,2.49,1.09,0,">1 nonsynonymous","D59K Q144L T201G",3
"lib2","SARS-CoV-2","GACGCATAAACTTCAT",3,7.34,8.27,-2.56,0.26,1.79,1.03,0.03,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","GACGCATCAAAACCTG",5,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103T L131S",2
"lib2","SARS-CoV-2","GACGCATGAATGGTAC",2,31.6,9.05,-1.79,0.06,2.89,1.05,0,">1 nonsynonymous","L95I Y143V S184N",3
"lib2","SARS-CoV-2","GACGCCAACCACTACT",6,60.77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11N V37K P82T G155P",4
"lib2","SARS-CoV-2","GACGCCAATCAATAAG",10,158.42,10,-0.84,0.03,2.71,1.05,0,">1 nonsynonymous","K26F Y121M",2
"lib2","SARS-CoV-2","GACGCCAGGCTCTAAG",22,144.18,6,-4.84,1.45,1.5,1.13,0,">1 nonsynonymous","Y93T A192T K198Q",3
"lib2","SARS-CoV-2","GACGCCATTGACATTC",9,91.21,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2L K94L S129C G166E",4
"lib2","SARS-CoV-2","GACGCCCAACAAGGCT",6,126.91,9.71,-1.13,0.05,2.84,1.09,0,">1 nonsynonymous","S45Y G166S",2
"lib2","SARS-CoV-2","GACGCCCAAGATAGTT",1,32.7,6,-4.84,2,1.5,1.36,0.03,">1 nonsynonymous","R25V N120A",2
"lib2","SARS-CoV-2","GACGCCCCTTAGACGT",3,29.41,10.84,0.01,0.04,3,1,0,">1 nonsynonymous","S36M V115Y",2
"lib2","SARS-CoV-2","GACGCCGAGGATAATA",5,216.32,10.69,-0.14,0.02,2.95,1.05,0,">1 nonsynonymous","N64D S129N V194I",3
"lib2","SARS-CoV-2","GACGCCGCCCATGGAC",2,22.67,6,-4.84,1.58,1.5,1.11,0.04,">1 nonsynonymous","A22S Y50P L57A F62L Q163L",5
"lib2","SARS-CoV-2","GACGCCTGCTCCATAT",10,74.09,8.45,-2.39,0.1,1.97,1.07,0,">1 nonsynonymous","N1R C61V Y121N G155D",4
"lib2","SARS-CoV-2","GACGCCTTACTTGCAT",7,148.43,10.17,-0.66,0.06,2.57,1.02,0,"1 nonsynonymous","Q163P",1
"lib2","SARS-CoV-2","GACGCCTTGGCTTATC",2,0.92,NA,NA,NA,NA,NA,NA,"stop","S19Y C49R D75N R136*",4
"lib2","SARS-CoV-2","GACGCGAACTCAATCA",8,13.66,10.86,0.02,0.06,2.82,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGCGAATAACCTCG",7,89.23,10.81,-0.03,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGCGAATATTAAGG",5,176.5,9.95,-0.88,0.04,2.92,1.04,0,">1 nonsynonymous","A67I K87V D98E N120L",4
"lib2","SARS-CoV-2","GACGCGACTCAAGTGA",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S N107S C150I",3
"lib2","SARS-CoV-2","GACGCGAGATTCTGTA",3,1.22,NA,NA,NA,NA,NA,NA,"stop","S45C T63Y P82* Y119N R136S I142Y",6
"lib2","SARS-CoV-2","GACGCGATGAAAATTA",4,0,NA,NA,NA,NA,NA,NA,"stop","G9M K48* A105D N110K Y119*",5
"lib2","SARS-CoV-2","GACGCGCCAGCCCAGT",2,13.76,10.74,-0.1,0.12,2.92,1.05,0.01,">1 nonsynonymous","A42T N151L",2
"lib2","SARS-CoV-2","GACGCGCCCCTACTTA",5,3.53,NA,NA,NA,NA,NA,NA,"stop","R16D D97F Y143*",3
"lib2","SARS-CoV-2","GACGCGCGCCTGAACT",3,25.77,9.66,-1.18,0.21,1.73,1.13,0.01,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","GACGCGCTTATGAAAT",1,22.23,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6Q G51V N120V",3
"lib2","SARS-CoV-2","GACGCGCTTGACGACA",2,24.93,10.86,0.02,0.09,2.91,1.09,0,"1 nonsynonymous","T3R",1
"lib2","SARS-CoV-2","GACGCGGGAGGCAGAA",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30K G117E R124H",3
"lib2","SARS-CoV-2","GACGCTAAATCAAAAC",14,126.02,9.95,-0.89,0.06,2.2,1.08,0,"1 nonsynonymous","V20S",1
"lib2","SARS-CoV-2","GACGCTAAATTGTGGG",8,88.94,10.79,-0.04,0.03,2.96,1.05,0,"1 nonsynonymous","T193S",1
"lib2","SARS-CoV-2","GACGCTAAGCATAACT",9,0.96,NA,NA,NA,NA,NA,NA,"stop","S36H I88* E141G R179F",4
"lib2","SARS-CoV-2","GACGCTAATCACCCAA",2,39.57,10.88,0.05,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGCTAATGTAGTGG",5,1.09,NA,NA,NA,NA,NA,NA,"stop","G9R A14H R73*",3
"lib2","SARS-CoV-2","GACGCTACACAATTTG",2,51.39,10.15,-0.68,0.1,2.49,1,0,">1 nonsynonymous","T3R L57Y T100R G196M",4
"lib2","SARS-CoV-2","GACGCTAGACAGCGCT",8,94.49,10.9,0.06,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGCTATACTCACGA",8,107.48,10.84,0.01,0.07,2.94,1.08,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GACGCTATTGCCTGAC",1,7.08,9.97,-0.87,0.12,2.66,1,0,">1 nonsynonymous","S139L G146S",2
"lib2","SARS-CoV-2","GACGCTCAATGTAAAT",1,60.98,10.04,-0.8,0.05,2.54,1.15,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GACGCTCATCGCCTTT",7,45.09,10.08,-0.76,0.08,2.78,1.03,0,">1 nonsynonymous","D90T T100S",2
"lib2","SARS-CoV-2","GACGCTCCGAACAAGC",6,40.5,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T3H F17L W23S S43T F99L",5
"lib2","SARS-CoV-2","GACGCTCTAAGTTCCA",3,35.29,8.44,-2.4,0.11,2.26,1.04,0,">1 nonsynonymous","P149Y F167W",2
"lib2","SARS-CoV-2","GACGCTGACTGCACGA",4,41.37,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6N P54N S108V Y175E",4
"lib2","SARS-CoV-2","GACGCTGAGGCTTATA",1,22.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19Y S45N P133V",3
"lib2","SARS-CoV-2","GACGCTTATAAACCCA",1,31.62,10.07,-0.77,0.11,2.62,1,0,">1 nonsynonymous","A18E K56W",2
"lib2","SARS-CoV-2","GACGCTTATTCACGGA",8,78.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50C S113V R127K I142R",4
"lib2","SARS-CoV-2","GACGCTTCCGGCACTG",2,21.72,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","N4P N58Q N157T F167N",4
"lib2","SARS-CoV-2","GACGCTTGATTGTTTA",7,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L R136G",2
"lib2","SARS-CoV-2","GACGCTTGTAAACTTA",5,15.82,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N1S N58M E76Y A89D V173N P197G",6
"lib2","SARS-CoV-2","GACGGAAAAATCGAAG",6,57.86,10.12,-0.72,0.05,2.84,1.04,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","GACGGAACTGGGATAT",9,88.08,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G101F K128C",2
"lib2","SARS-CoV-2","GACGGAAGTATGTTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","GACGGAATCTTGTTAT",3,1.93,NA,NA,NA,NA,NA,NA,"stop","T3P T148* F167L",3
"lib2","SARS-CoV-2","GACGGACAACGAGGCT",5,74.9,10.8,-0.04,0.04,2.89,1.13,0,"1 nonsynonymous","K198A",1
"lib2","SARS-CoV-2","GACGGACGAATGCTTT",4,16.8,6,-4.84,1.32,1.5,1.06,0,">1 nonsynonymous","W23N N58K Y123T G174Y",4
"lib2","SARS-CoV-2","GACGGACTTATATACT",3,99.98,10.34,-0.49,0.09,2.77,1.09,0,">1 nonsynonymous","A22R Y121Q",2
"lib2","SARS-CoV-2","GACGGAGAAATTCCGA",8,98.39,8.55,-2.29,0.08,1.92,1.07,0,">1 nonsynonymous","V65K G83L F156H",3
"lib2","SARS-CoV-2","GACGGAGATAGACCTA",1,4.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V180F",1
"lib2","SARS-CoV-2","GACGGATAAATAGAAC",6,58.33,9.93,-0.91,0.07,2.54,1,0,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","GACGGATAATTATCGA",4,1.78,NA,NA,NA,NA,NA,NA,"stop","S41Y P82* L188M",3
"lib2","SARS-CoV-2","GACGGATCAAGAAAAG",5,62.25,10.82,-0.02,0.05,2.9,1.1,0,"1 nonsynonymous","P191T",1
"lib2","SARS-CoV-2","GACGGATTTGTTCATA",3,63.09,8.35,-2.49,0.13,2.4,1.05,0.01,">1 nonsynonymous","I2M C6N K48R G83R Y143I",5
"lib2","SARS-CoV-2","GACGGCAATAAGAGAA",1,23.02,9.86,-0.98,0.11,2.06,1,0.01,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","GACGGCAATGGAACCA",2,19.5,9.51,-1.32,0.15,2.45,1.05,0.01,">1 nonsynonymous","P54G K128M G146D",3
"lib2","SARS-CoV-2","GACGGCCAATATTCCT",5,80.63,9.71,-1.13,0.08,2.75,1.01,0,">1 nonsynonymous","R27W G116H G155S",3
"lib2","SARS-CoV-2","GACGGCGCAGGACACA",2,55.97,10.8,-0.04,0.05,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGGCGCCACTTTGC",8,264.78,8.14,-2.69,0.11,2.8,1.1,0,">1 nonsynonymous","C61G N110E F126S",3
"lib2","SARS-CoV-2","GACGGCGCTAAAAGAC",1,13.46,10.79,-0.04,0.09,2.79,1.23,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","GACGGCGGTTAATTCT",18,199,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S36L S45V A89S G101F G152S F156S P169Y R179Y",8
"lib2","SARS-CoV-2","GACGGCTATCGCGAGA",11,210.84,10.84,0.01,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGGGAAAAACTGAC",3,20.41,6,-4.84,2,3,1.12,0,"1 nonsynonymous","F167A",1
"lib2","SARS-CoV-2","GACGGGAAAGAAACAA",5,38.97,6.74,-4.1,0.24,1.5,1.07,0.01,">1 nonsynonymous","C6L D34V Y121I",3
"lib2","SARS-CoV-2","GACGGGACGTGGACTA",3,29.59,10.51,-0.32,0.08,2.8,1.18,0,"1 nonsynonymous","D98M",1
"lib2","SARS-CoV-2","GACGGGATTAATAGAC",2,75.5,10.76,-0.08,0.05,2.94,1.08,0,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","GACGGGATTTAAAAAC",1,20.93,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","V11M G86W",2
"lib2","SARS-CoV-2","GACGGGCATTAATGCG",1,12.22,9.34,-1.5,0.27,2.35,1,0.02,">1 nonsynonymous","D90M K132S E141I",3
"lib2","SARS-CoV-2","GACGGGGCAAAAATAT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","L5H L57* K198T",3
"lib2","SARS-CoV-2","GACGGGTAAAGGACTA",1,37.51,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R25A P133K",2
"lib2","SARS-CoV-2","GACGGGTACACACCGT",4,105.82,10.04,-0.8,0.06,2.38,1.04,0,"1 nonsynonymous","Y178R",1
"lib2","SARS-CoV-2","GACGGGTATCGCATTG",12,3.24,NA,NA,NA,NA,NA,NA,"stop","K56* P82N",2
"lib2","SARS-CoV-2","GACGGTACATACGCAA",10,79,9.99,-0.85,0.08,2.46,1.03,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","GACGGTACGTGTATAA",11,129.71,10.78,-0.05,0.05,2.9,1.11,0,">1 nonsynonymous","S29N K199Q",2
"lib2","SARS-CoV-2","GACGGTATAATTGTGA",3,20.1,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","T46W G83M G101D G117R S129Q P149M V180F S184D",8
"lib2","SARS-CoV-2","GACGGTCAAAAGCCCT",7,65.01,7.75,-3.08,0.38,1.5,1.07,0.05,">1 nonsynonymous","K26L T46V T63F Y91L I104V E141R",6
"lib2","SARS-CoV-2","GACGGTCCCTGCTGAA",3,14.38,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","T15I A89M Y123P",3
"lib2","SARS-CoV-2","GACGGTGACAGTACGA",1,10.46,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","D68E G86S F99H N118K P149A",5
"lib2","SARS-CoV-2","GACGGTGATGCTTATC",5,52.29,10.73,-0.11,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGGTTATGGCGTAA",2,54.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M N107W",2
"lib2","SARS-CoV-2","GACGGTTCGCAAAAGC",4,109.06,8.89,-1.95,0.22,1.5,1.11,0.02,">1 nonsynonymous","N4M D137N",2
"lib2","SARS-CoV-2","GACGTAAAAGACTGTC",5,47.67,7.48,-3.36,0.18,2.05,1.1,0.01,">1 nonsynonymous","D90F F126S V173Y",3
"lib2","SARS-CoV-2","GACGTAAACAAACAAC",4,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99K N118H",2
"lib2","SARS-CoV-2","GACGTAACACAAGCAA",5,1.75,NA,NA,NA,NA,NA,NA,"stop","N58* E141L",2
"lib2","SARS-CoV-2","GACGTAACCTACCCTC",2,63.82,10.72,-0.12,0.06,2.8,1.05,0,">1 nonsynonymous","G83E S200L",2
"lib2","SARS-CoV-2","GACGTAACGCGTAAAC",9,7.67,NA,NA,NA,NA,NA,NA,"stop","W23F E141* L162K G174I",4
"lib2","SARS-CoV-2","GACGTAACGGTCAGAT",11,137.35,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y39L Y119T D137S G146L Y178L",5
"lib2","SARS-CoV-2","GACGTAACTAAGGAGT",5,20.66,10.72,-0.11,0.04,2.94,1.04,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","GACGTAATATCACTAG",2,15.13,6.59,-4.25,0.71,1.5,1.27,0.04,">1 nonsynonymous","T15I C61P I104C L131M",4
"lib2","SARS-CoV-2","GACGTAATCACAAATA",3,63.73,8.86,-1.98,0.07,2.82,1.12,0,">1 nonsynonymous","R73A T100R V115D",3
"lib2","SARS-CoV-2","GACGTAATCACTATAC",5,52.79,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5R G86R L95S P133G",4
"lib2","SARS-CoV-2","GACGTAATTCTTGCAT",1,32.8,10.12,-0.72,0.09,2.79,1.13,0,">1 nonsynonymous","D90A T100A",2
"lib2","SARS-CoV-2","GACGTACCGTAGTCTT",1,5.71,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T15I Y35N C61H N107T V115R V180P",6
"lib2","SARS-CoV-2","GACGTACGCATATGTG",4,3.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACGTACGCCATGCAC",9,51.97,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","GACGTACGGGTGCTTC",1,7.88,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","A22V I28V T85L W106C N157S",5
"lib2","SARS-CoV-2","GACGTACGTGAAATGG",1,10.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K26P T55W",2
"lib2","SARS-CoV-2","GACGTACTGAGGCTAT",1,81.02,8.13,-2.71,0.08,1.99,1.03,0,">1 nonsynonymous","T55F N118F G155N",3
"lib2","SARS-CoV-2","GACGTAGCCAAAAGAT",2,14.42,8.88,-1.96,0.18,1.84,1.2,0.02,">1 nonsynonymous","L38A C61L Q84K T201I",4
"lib2","SARS-CoV-2","GACGTAGCCAACGTAG",1,24.96,8.23,-2.61,0.18,1.87,1.09,0.01,">1 nonsynonymous","N4K C158S",2
"lib2","SARS-CoV-2","GACGTAGGCAATCACA",11,229.44,10.39,-0.45,0.04,2.93,1.02,0,"1 nonsynonymous","A14M",1
"lib2","SARS-CoV-2","GACGTAGTATATTGTA",7,4.25,NA,NA,NA,NA,NA,NA,"stop","I2L I28* Y35S P82L K87V Y93E",6
"lib2","SARS-CoV-2","GACGTATAAACCCTAT",7,0.19,NA,NA,NA,NA,NA,NA,"stop","C61A V65F D90* N107L",4
"lib2","SARS-CoV-2","GACGTATAAATCAGTG",3,23.59,10.76,-0.08,0.09,2.89,1.14,0,"1 nonsynonymous","T100W",1
"lib2","SARS-CoV-2","GACGTATATCTACGTT",1,17.11,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","C49V N120Q K132M Q176T",4
"lib2","SARS-CoV-2","GACGTATATTTGGACA",16,230.76,9.84,-1,0.04,2.67,1.05,0,">1 nonsynonymous","T55G A81E G116I",3
"lib2","SARS-CoV-2","GACGTATTGACCCCGA",20,363.93,10.76,-0.07,0.04,2.94,1.08,0,"1 nonsynonymous","N151A",1
"lib2","SARS-CoV-2","GACGTCAAACCTATAT",2,13.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L60N S113D S139H K199S",4
"lib2","SARS-CoV-2","GACGTCAACTACTATA",2,24.33,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","C61M E76S Y175I",3
"lib2","SARS-CoV-2","GACGTCAAGCACTCTC",5,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S A33L S36Y Y91V I104F D112V S184Y S200K",8
"lib2","SARS-CoV-2","GACGTCAATTTTAGCG",7,31.68,10.81,-0.02,0.07,2.87,1.15,0,"1 nonsynonymous","R16S",1
"lib2","SARS-CoV-2","GACGTCATCCTATAAT",10,161.63,10.87,0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGTCATTAATTACA",2,21.6,8.09,-2.74,0.27,2.44,1.06,0.03,"1 nonsynonymous","Y143G",1
"lib2","SARS-CoV-2","GACGTCCAAGATATAA",2,12,9.11,-1.72,0.13,2.82,1.15,0.01,">1 nonsynonymous","N120D S129Y G146T",3
"lib2","SARS-CoV-2","GACGTCCCTGCTCATT",6,120.91,10.32,-0.52,0.05,2.92,1.05,0,">1 nonsynonymous","G155L L188N",2
"lib2","SARS-CoV-2","GACGTCCGTTACTTCA",1,54.6,9.82,-1.01,0.06,2.11,1.04,0,">1 nonsynonymous","Y35A A42H R136T K199Y",4
"lib2","SARS-CoV-2","GACGTCGCATTGTTCG",1,17.94,9.04,-1.79,0.08,1.8,1.04,0.01,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","GACGTCGCGCATGAAC",2,26.68,10.17,-0.67,0.1,2.91,1.08,0.01,">1 nonsynonymous","T15G Y39T",2
"lib2","SARS-CoV-2","GACGTCGTATTTGTGT",7,102.72,10.08,-0.75,0.08,2.48,1.03,0,"1 nonsynonymous","L131T",1
"lib2","SARS-CoV-2","GACGTCTAAGACGAAA",6,92.53,8.28,-2.56,0.13,2.21,1.05,0.01,"1 nonsynonymous","Y175D",1
"lib2","SARS-CoV-2","GACGTCTTACCGGGTC",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26R L122D S129R S139D S164E",5
"lib2","SARS-CoV-2","GACGTGACGTTTTTAA",4,102.82,9.33,-1.51,0.06,1.95,1.07,0,">1 nonsynonymous","I28T F160V",2
"lib2","SARS-CoV-2","GACGTGACTTGTTGAT",5,59,9.28,-1.55,0.09,2.13,1.11,0,">1 nonsynonymous","L5R K128L E141L V173G",4
"lib2","SARS-CoV-2","GACGTGAGGCAATAGC",1,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23H P149A",2
"lib2","SARS-CoV-2","GACGTGAGGGCTCTTG",1,15.21,10.94,0.1,0.07,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GACGTGAGTCCCTCTA",7,74.97,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14F G74P Y93G",3
"lib2","SARS-CoV-2","GACGTGCCTCAAATGT",10,133.55,10.59,-0.25,0.04,2.92,1.03,0,">1 nonsynonymous","S43P A81S",2
"lib2","SARS-CoV-2","GACGTGCGATTTGAAA",1,19.91,10.66,-0.18,0.06,2.83,1.19,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","GACGTTAGATGCCATG",8,56.73,10.21,-0.62,0.05,2.62,1.02,0,">1 nonsynonymous","L60S W106F S200V",3
"lib2","SARS-CoV-2","GACGTTAGATTCAACT",3,38.67,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S41V V71S C158V",3
"lib2","SARS-CoV-2","GACGTTAGCCCGGGCC",1,9.28,6.07,-4.76,2,1.53,1.15,0.06,">1 nonsynonymous","Y21R Y91L T100F N107L P133I Q163F V182T",7
"lib2","SARS-CoV-2","GACGTTAGTGAAACGT",6,187.35,10.89,0.05,0.05,2.95,1.07,0,">1 nonsynonymous","Y39T T201M",2
"lib2","SARS-CoV-2","GACGTTATAATCTCTT",1,9.8,10.89,0.06,0.11,2.98,1.03,0.01,"1 nonsynonymous","K198L",1
"lib2","SARS-CoV-2","GACGTTCAACACATGA",11,41.24,9.21,-1.62,0.1,1.74,1.05,0.01,">1 nonsynonymous","L5E P96W",2
"lib2","SARS-CoV-2","GACGTTCACGCATATA",1,32.85,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L122T P161R",2
"lib2","SARS-CoV-2","GACGTTCGATTCAATC",3,26.14,6.95,-3.89,0.34,1.5,1.06,0.03,">1 nonsynonymous","V103S P133S",2
"lib2","SARS-CoV-2","GACGTTCTCGTTTTAC",9,42.17,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","G51S F62P G83W I104L D112E",5
"lib2","SARS-CoV-2","GACGTTGAGACGGACG",7,48.62,10.24,-0.6,0.06,2.68,1.14,0,">1 nonsynonymous","P96N P149Q",2
"lib2","SARS-CoV-2","GACGTTGCAAAGTAAA",5,155.54,10.02,-0.81,0.03,2.92,1.07,0,">1 nonsynonymous","T3N S45D Y175H",3
"lib2","SARS-CoV-2","GACGTTTAAGTTTCCC",6,28.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16V V77S G86N P96R",4
"lib2","SARS-CoV-2","GACGTTTATGTGGAAC",4,7.6,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","E10Y T100D N107D E141M",4
"lib2","SARS-CoV-2","GACGTTTGCTTTTCAA",10,28.86,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","S43K C49Y P82G S184T",4
"lib2","SARS-CoV-2","GACGTTTTTTGGATCA",4,31.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81P K87N G152I",3
"lib2","SARS-CoV-2","GACTAAAAAATCAAGG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W L57R V173K",3
"lib2","SARS-CoV-2","GACTAAAAACTAATAT",5,31.6,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61Y K128Y C150V G166H",4
"lib2","SARS-CoV-2","GACTAAAAATCATATT",3,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149L V180G",2
"lib2","SARS-CoV-2","GACTAAAACAAATGCT",13,329.63,10.65,-0.18,0.02,2.92,1.03,0,">1 nonsynonymous","P133A P149M N171T",3
"lib2","SARS-CoV-2","GACTAAAAGACACGAT",2,0.84,NA,NA,NA,NA,NA,NA,"stop","C6R A18T Y35* T63G V65I S200L",6
"lib2","SARS-CoV-2","GACTAAAAGCATGAAA",8,39.13,6.14,-4.7,0.83,1.5,1.19,0.02,">1 nonsynonymous","F99D K132M P149T",3
"lib2","SARS-CoV-2","GACTAAAATAGCCAGA",6,1.81,NA,NA,NA,NA,NA,NA,"stop","S69N L122R P149L C150Y S200*",5
"lib2","SARS-CoV-2","GACTAAACATGTTAAC",6,0.86,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","GACTAAACGAATCAAT",10,206.18,10.33,-0.51,0.03,2.89,1.02,0,">1 nonsynonymous","P7L D90N",2
"lib2","SARS-CoV-2","GACTAAACGACCACCA",10,145.4,8.81,-2.03,0.12,1.5,1.13,0.01,">1 nonsynonymous","C49M H189C",2
"lib2","SARS-CoV-2","GACTAAAGAAATTATC",5,77.53,6.3,-4.53,0.71,1.5,1.17,0.03,">1 nonsynonymous","P54M D90L G101D Y175K",4
"lib2","SARS-CoV-2","GACTAAAGATTACCTT",3,22.68,10.45,-0.39,0.07,3,1,0,">1 nonsynonymous","D90L L122W",2
"lib2","SARS-CoV-2","GACTAAATCATTACCC",20,320.33,10.76,-0.08,0.04,2.88,1.1,0,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","GACTAAATCTAAAATA",9,60.88,10.96,0.13,0.16,2.78,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACTAAATGCTAAATA",13,285.93,9,-1.84,0.06,1.98,1.09,0,">1 nonsynonymous","T3H E154R Q176L",3
"lib2","SARS-CoV-2","GACTAAATTAAACTAA",2,10.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14G L38R F44T Y91S",4
"lib2","SARS-CoV-2","GACTAAATTTACATCG",8,36.96,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","A22P L60R Y93M",3
"lib2","SARS-CoV-2","GACTAACAAAACGTAC",5,162.31,10.87,0.04,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTAACACACCCCCA",9,122.91,10.66,-0.17,0.03,2.96,1.05,0,"1 nonsynonymous","E154N",1
"lib2","SARS-CoV-2","GACTAACACGTTGACG",2,29.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P96L F99S",2
"lib2","SARS-CoV-2","GACTAACACTCCTTTC",2,0.23,NA,NA,NA,NA,NA,NA,"stop","S19* R179S T201F",3
"lib2","SARS-CoV-2","GACTAACATCAACCCT",4,17.03,9.81,-1.03,0.15,2.04,1,0.01,">1 nonsynonymous","D34V F44T",2
"lib2","SARS-CoV-2","GACTAACCACAAGTTG",5,50.82,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C31A C61K A81S K128Y Y143A",5
"lib2","SARS-CoV-2","GACTAACCACGACTAT",5,31.97,9.94,-0.89,0.1,2.46,1.14,0,">1 nonsynonymous","R25H V52I L60V L187H",4
"lib2","SARS-CoV-2","GACTAACCACTAATGG",1,35.61,6.11,-4.72,1.54,1.5,1.33,0.06,">1 nonsynonymous","S69F R78C K87L S139D G172S",5
"lib2","SARS-CoV-2","GACTAACCAGAGGCGG",6,59.37,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A89V I104T V115Q S129M F134A",5
"lib2","SARS-CoV-2","GACTAACCCGATAATA",4,38.98,9.57,-1.27,0.05,2.95,1.08,0,"1 nonsynonymous","F126I",1
"lib2","SARS-CoV-2","GACTAACTAGCAACAA",13,3.28,NA,NA,NA,NA,NA,NA,"stop","F8* F47I D98P S200F",4
"lib2","SARS-CoV-2","GACTAACTATCTATCA",8,55.06,6,-4.84,2,1.5,1.33,0.02,">1 nonsynonymous","L5R T63M F70N",3
"lib2","SARS-CoV-2","GACTAACTCATCCGGT",1,12.09,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","N13F L38C T85S G101L",4
"lib2","SARS-CoV-2","GACTAACTGCATTTTA",5,51.27,10.68,-0.15,0.07,2.88,1.1,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","GACTAAGACGCTCGCA",3,87.79,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37A A89S F99V G117V G146V Q168L",6
"lib2","SARS-CoV-2","GACTAAGCGAACCTCG",4,29.34,6.2,-4.63,1.06,1.5,1.24,0.04,"1 nonsynonymous","A89D",1
"lib2","SARS-CoV-2","GACTAAGGTAACGATT",7,73.96,10.74,-0.1,0.06,2.92,1.1,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","GACTAAGTAACACAAT",1,41.17,10.12,-0.71,0.06,2.83,1.05,0,">1 nonsynonymous","S45L K198L",2
"lib2","SARS-CoV-2","GACTAATAAAAAAGTA",4,36.62,10.87,0.03,0.08,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTAATAAAGGGAAA",1,4.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","GACTAATACCTTCTAT",3,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K N107V S129Y T148I Q176L",5
"lib2","SARS-CoV-2","GACTAATCACAGCTTA",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A14P G101S E135M",4
"lib2","SARS-CoV-2","GACTAATGATCCAATA",5,51.5,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11A T55Q L95C E135V Y175G S184Y",6
"lib2","SARS-CoV-2","GACTAATGGGCTACTA",4,63.79,6.79,-4.05,0.56,1.5,1.31,0.05,">1 nonsynonymous","S53A F99T F134A F160G",4
"lib2","SARS-CoV-2","GACTAATGGTAAAGTG",5,23.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G101L Y119G",2
"lib2","SARS-CoV-2","GACTAATGTGTATCAA",10,25.51,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","GACTAATGTTAAGCGA",4,23.5,8.61,-2.23,0.22,1.54,1,0.02,">1 nonsynonymous","R25T V115L Y123M S129F Q163S",5
"lib2","SARS-CoV-2","GACTAATTAACACCTG",4,78.05,9.44,-1.39,0.07,1.97,1.06,0,">1 nonsynonymous","N4D Y35C I104T",3
"lib2","SARS-CoV-2","GACTACAAAACGCCAA",2,19.37,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y35K V115A S139P P149H S200C",5
"lib2","SARS-CoV-2","GACTACAATAGACTGA",2,57.6,10.84,0,0.03,2.92,1.1,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","GACTACAATCCTGTCT",3,20.66,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","L95D Q163H",2
"lib2","SARS-CoV-2","GACTACACCAAACAAG",1,13.35,8.74,-2.1,0.17,1.71,1.07,0.01,">1 nonsynonymous","T3Y K56P I142H",3
"lib2","SARS-CoV-2","GACTACAGAGTCTCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K N151E Y178T",3
"lib2","SARS-CoV-2","GACTACAGTAACAACA",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G E141H Y178E",3
"lib2","SARS-CoV-2","GACTACATCGTGCGGT",1,5.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACTACATGAGAACAT",2,38.74,10.18,-0.66,0.08,2.43,1,0,">1 nonsynonymous","L95C S200L",2
"lib2","SARS-CoV-2","GACTACCAAACACTAG",4,98.73,10.89,0.05,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTACCACATCACTA",21,177.97,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T85L I142G T148P",3
"lib2","SARS-CoV-2","GACTACCTCCCACATA",12,93.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25D F99I",2
"lib2","SARS-CoV-2","GACTACCTCCGCCATA",7,38.82,6.01,-4.83,0.58,3,1.23,0.01,">1 nonsynonymous","T3P D68K N118Y T140M V153N",5
"lib2","SARS-CoV-2","GACTACCTTAAAACTA",1,33.14,8.88,-1.96,0.12,2.85,1.07,0.01,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","GACTACGAAGAATATG",2,12.57,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17I F47K N58L G116T",4
"lib2","SARS-CoV-2","GACTACGAAGACTATT",2,71.99,10.68,-0.15,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTACGACACAATTA",6,18.26,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V103L N118D",2
"lib2","SARS-CoV-2","GACTACGACAGGACCC",4,30.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y D68L Y91S Y143L",4
"lib2","SARS-CoV-2","GACTACGTGTATATTC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37K A89M N107E Y121N K128*",5
"lib2","SARS-CoV-2","GACTACTAAGACAGGA",4,2.65,NA,NA,NA,NA,NA,NA,"stop","F70G E76* T140* E154L",4
"lib2","SARS-CoV-2","GACTACTACCTCCGGA",11,10.48,NA,NA,NA,NA,NA,NA,"stop","G9* N40Y A81V Y91T N120D S129I",6
"lib2","SARS-CoV-2","GACTACTACGATAGCC",4,0.15,NA,NA,NA,NA,NA,NA,"stop","R25G L38T K56Q T140F Q168*",5
"lib2","SARS-CoV-2","GACTACTAGCAAAACT",8,76.08,9.41,-1.43,0.11,2.65,1.08,0,">1 nonsynonymous","T3L F44N L60A",3
"lib2","SARS-CoV-2","GACTACTATAGCCTGG",7,22.89,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C61E D90S F99Q P161S",4
"lib2","SARS-CoV-2","GACTACTCTGTATGTA",3,22.27,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F44A Y143K C158Q Y165V",4
"lib2","SARS-CoV-2","GACTAGAAAAAAAAGA",9,86.94,10.73,-0.11,0.04,2.89,1.13,0,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","GACTAGAAAAGTGCTT",2,31.75,10.61,-0.23,0.05,3,1,0,">1 nonsynonymous","R16G D98A I104L S129T H189D",5
"lib2","SARS-CoV-2","GACTAGAAATCATATA",2,8.8,9.87,-0.97,0.21,2.35,1,0.02,">1 nonsynonymous","D59N Y165F A190Y",3
"lib2","SARS-CoV-2","GACTAGAATGATTATA",4,13.97,6,-4.84,1.91,1.5,1.08,0.02,">1 nonsynonymous","N1K E10R L60R I88H K94P R127G G155Q N171G",8
"lib2","SARS-CoV-2","GACTAGACAATCAGAC",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T F99T V173R",3
"lib2","SARS-CoV-2","GACTAGACACCATTAC",11,106.55,10.09,-0.75,0.07,2.44,1.03,0,">1 nonsynonymous","N1F R136L",2
"lib2","SARS-CoV-2","GACTAGAGATTGTAGA",10,159.85,10.82,-0.02,0.04,2.91,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTAGAGTACTTTAT",6,3.74,NA,NA,NA,NA,NA,NA,"stop","I72G Y93* C150T C158P Y165D Y175V",6
"lib2","SARS-CoV-2","GACTAGAGTATATTGT",5,96.98,10.62,-0.22,0.11,2.64,1.16,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","GACTAGATTCAATGAA",3,45.88,10.15,-0.68,0.05,2.82,1.07,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","GACTAGCATCATTCCG",1,6.97,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","C6R S129P Y175V",3
"lib2","SARS-CoV-2","GACTAGCATTGATCGA",13,184.84,10.54,-0.3,0.03,2.89,1.06,0,">1 nonsynonymous","S43M D90K S147Y A192S",4
"lib2","SARS-CoV-2","GACTAGCCACGCTATG",5,35.03,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","K48N L95E",2
"lib2","SARS-CoV-2","GACTAGCCCAGGCGCA",1,41.34,10.31,-0.53,0.04,2.89,1.15,0,">1 nonsynonymous","N58S K87A",2
"lib2","SARS-CoV-2","GACTAGCTAAAACTCG",1,10.4,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","R16L R25L Q84K",3
"lib2","SARS-CoV-2","GACTAGCTCTGGGGTG",9,186.04,10.45,-0.38,0.05,2.86,1.08,0,">1 nonsynonymous","N24I S200T",2
"lib2","SARS-CoV-2","GACTAGGATGATCAAT",3,7.22,8.66,-2.18,0.26,2.04,1.07,0.02,">1 nonsynonymous","D34V A42I N64G S164V",4
"lib2","SARS-CoV-2","GACTAGGGGTCTCCGA",3,12.8,9.82,-1.02,0.04,3,1,0,">1 nonsynonymous","F62C P169D",2
"lib2","SARS-CoV-2","GACTAGTAGAAGGTAT",8,208.87,10.27,-0.57,0.03,2.83,1.06,0,">1 nonsynonymous","E135V H189P",2
"lib2","SARS-CoV-2","GACTAGTATCCACATA",13,59.87,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N30M F99C W106A P133R C158I G172C",6
"lib2","SARS-CoV-2","GACTAGTCATTGACAG",9,139.88,10.31,-0.53,0.04,3,1.02,0,">1 nonsynonymous","G9K K87M P191T",3
"lib2","SARS-CoV-2","GACTAGTCGCCAACCA",1,0.68,NA,NA,NA,NA,NA,NA,"stop","R25M L60R Q84S D97I Y121P S129R Y159*",7
"lib2","SARS-CoV-2","GACTAGTTATACACGA",5,38.41,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","T3N S19F V37K G51C G86I W106S R127K T140V S147L G152H",10
"lib2","SARS-CoV-2","GACTAGTTCCTGCAAC",5,98.44,10.13,-0.71,0.05,2.68,1,0,">1 nonsynonymous","N110S K128H R136L V173F",4
"lib2","SARS-CoV-2","GACTATAAATGACTTA",3,51.6,7.21,-3.63,0.37,1.93,1.26,0.03,">1 nonsynonymous","G51N Y119A G146V K198C",4
"lib2","SARS-CoV-2","GACTATAACCTACCAA",5,14.96,10.83,-0.01,0.07,3,1,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","GACTATAATTAATATG",1,22.7,10.85,0.01,0.08,2.91,1,0,"synonymous","",0
"lib2","SARS-CoV-2","GACTATACAATACGTA",14,141.33,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L38H F99K D137T S147A F167E S200G T201M",7
"lib2","SARS-CoV-2","GACTATACTTGCACCG",12,88.93,10.06,-0.78,0.07,2.39,1.06,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","GACTATAGCTATTAAC",1,64.6,10.57,-0.26,0.04,2.97,1.01,0,">1 nonsynonymous","S43N K198L",2
"lib2","SARS-CoV-2","GACTATATAAGTATAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GACTATATATATCTCT",5,84.29,7.81,-3.03,0.22,1.5,1.13,0.02,"1 nonsynonymous","P177G",1
"lib2","SARS-CoV-2","GACTATATCTGCCCAA",2,14.59,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F44N P82N L183T",3
"lib2","SARS-CoV-2","GACTATATTAGGCAGT",7,85.16,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2N F44I N58P A105L R179L",5
"lib2","SARS-CoV-2","GACTATATTCGAAGTA",12,78.08,9.51,-1.33,0.06,2.06,1.08,0,">1 nonsynonymous","T3G A18V N107P A190S",4
"lib2","SARS-CoV-2","GACTATCAGATCACCT",8,5.42,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15L I80K V153E V173I",4
"lib2","SARS-CoV-2","GACTATCCACTCAGTG",4,97.5,10.79,-0.04,0.04,2.9,1.06,0,"1 nonsynonymous","V32E",1
"lib2","SARS-CoV-2","GACTATCGCACTAAAT",5,42.62,8.28,-2.55,0.14,2.02,1.07,0.01,"1 nonsynonymous","Y165P",1
"lib2","SARS-CoV-2","GACTATCGCCCCAATA",4,0.26,NA,NA,NA,NA,NA,NA,"stop","F12* L125W T201K",3
"lib2","SARS-CoV-2","GACTATCGTGTGGAAA",1,9.01,10.11,-0.73,0.11,3,1.05,0,">1 nonsynonymous","C61N D90M G116S",3
"lib2","SARS-CoV-2","GACTATCTCACAAATT",7,142.25,10.42,-0.41,0.04,2.9,1,0,"1 nonsynonymous","P96D",1
"lib2","SARS-CoV-2","GACTATCTGTCAGAAA",1,10.58,10.85,0.01,0.1,2.88,1.1,0,">1 nonsynonymous","T3Q S43G L122Y",3
"lib2","SARS-CoV-2","GACTATGACTAAAACT",2,68.14,10.58,-0.26,0.04,2.88,1.08,0,">1 nonsynonymous","D98L T201L",2
"lib2","SARS-CoV-2","GACTATGACTATACTA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P K26Q Y35K Q144H N157H G174F Y178K",7
"lib2","SARS-CoV-2","GACTATGAGCTGTGGA",2,20.4,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G83R Y93R N107F",3
"lib2","SARS-CoV-2","GACTATGCTTTTAGAA",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N T55C C61P V103L T140L",5
"lib2","SARS-CoV-2","GACTATGGAGCGTATA",7,114.66,10.5,-0.34,0.04,2.94,1.06,0,"1 nonsynonymous","R127K",1
"lib2","SARS-CoV-2","GACTATTACCCAACAA",4,1.74,NA,NA,NA,NA,NA,NA,"stop","C6* G51K A89T L95E E141M P177C",6
"lib2","SARS-CoV-2","GACTATTATTCAAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V F8A T140H S200D",4
"lib2","SARS-CoV-2","GACTATTCACATCCTG",2,12.25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4K W106V F134Q T140E",4
"lib2","SARS-CoV-2","GACTATTTAACATAAT",8,87.87,9.44,-1.4,0.07,2.57,1.07,0,">1 nonsynonymous","L38K K87T",2
"lib2","SARS-CoV-2","GACTATTTATCTGCAT",1,11.13,10.73,-0.1,0.08,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTCAAAACTCTTCC",8,189.96,10.32,-0.51,0.03,2.89,1.03,0,">1 nonsynonymous","S53A N171I Y178W",3
"lib2","SARS-CoV-2","GACTCAAAAGGAAATC",4,94.22,9.76,-1.08,0.07,2.02,1.06,0,">1 nonsynonymous","G9E D59I D90C",3
"lib2","SARS-CoV-2","GACTCAAAATAAAAAC",4,40.42,6.44,-4.39,0.23,1.85,1.12,0,">1 nonsynonymous","E141M N157P",2
"lib2","SARS-CoV-2","GACTCAAACACGGATT",10,135.61,9.91,-0.93,0.07,2.13,1.02,0,">1 nonsynonymous","I28M Y50R",2
"lib2","SARS-CoV-2","GACTCAAAGGCTCACG",11,174.95,8.65,-2.18,0.09,1.96,1.12,0,">1 nonsynonymous","I28K F156R",2
"lib2","SARS-CoV-2","GACTCAACAAATAACA",4,20.13,8.59,-2.24,0.11,3,1.08,0.01,">1 nonsynonymous","F156E T170S K199I",3
"lib2","SARS-CoV-2","GACTCAACCGTAAACC",4,0,NA,NA,NA,NA,NA,NA,"stop","C61W K94* K114R",3
"lib2","SARS-CoV-2","GACTCAACGGAGACCT",7,22.13,9.52,-1.32,0.1,2.03,1.06,0,">1 nonsynonymous","C6S G152H S184L T201R",4
"lib2","SARS-CoV-2","GACTCAAGCACTTTGC",4,28.57,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V11N T85S Y91Q N157V P161R F167L",6
"lib2","SARS-CoV-2","GACTCAAGGCGAACAA",1,95.07,10.81,-0.03,0.04,2.97,1.05,0,">1 nonsynonymous","T55Y V173F",2
"lib2","SARS-CoV-2","GACTCAATAAACATGA",5,74.9,8.48,-2.35,0.14,2.33,1.11,0.01,">1 nonsynonymous","L60M E76M Y91F K132A N171M Y175M",6
"lib2","SARS-CoV-2","GACTCAATACTTACGC",4,55.27,6,-4.84,1.12,1.5,1.1,0.01,">1 nonsynonymous","P7F V37W V71K L122Q G146V C150Y F167V",7
"lib2","SARS-CoV-2","GACTCAATAGACTATC",1,12.33,9.97,-0.87,0.1,2.8,1,0.01,">1 nonsynonymous","C61T G152C",2
"lib2","SARS-CoV-2","GACTCAATAGAGACAG",1,15.38,10.44,-0.4,0.1,2.82,1,0,">1 nonsynonymous","K56V D98L",2
"lib2","SARS-CoV-2","GACTCACATGCCCAGT",4,69.11,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","D34V I88F I104A R127P V173D",5
"lib2","SARS-CoV-2","GACTCACATTGAAGAG",4,42.62,8.92,-1.91,0.07,2.8,1.15,0,">1 nonsynonymous","S53T Y143T",2
"lib2","SARS-CoV-2","GACTCACCAAATATGG",3,0.24,NA,NA,NA,NA,NA,NA,"stop","S139*",1
"lib2","SARS-CoV-2","GACTCACCCACCTAAG",3,117.45,10.13,-0.71,0.07,2.66,1.04,0,">1 nonsynonymous","A14G K56G T63V",3
"lib2","SARS-CoV-2","GACTCACCGTGCCACT",3,33.47,8.34,-2.5,0.21,1.9,1.15,0.02,">1 nonsynonymous","V71M Y119S",2
"lib2","SARS-CoV-2","GACTCACTATAACAAA",4,6.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86R T201M",2
"lib2","SARS-CoV-2","GACTCACTTATTTCCA",5,68.35,10.27,-0.56,0.03,2.87,1.12,0,"1 nonsynonymous","P169A",1
"lib2","SARS-CoV-2","GACTCACTTTCCCATA",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44A T55L A81G G101L E141V",5
"lib2","SARS-CoV-2","GACTCAGAAAAGAGGC",2,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Y E141F F167C",3
"lib2","SARS-CoV-2","GACTCAGCACACTGCC",6,101.54,9.9,-0.94,0.11,2.21,1.05,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","GACTCAGCAGAGATTG",2,9.47,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","C49T L125P D137R A145C",4
"lib2","SARS-CoV-2","GACTCAGCGCACCAAG",16,204.55,9.37,-1.47,0.03,2.94,1.07,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","GACTCAGGACAAAATG",5,19.29,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N58S P82M K94I",3
"lib2","SARS-CoV-2","GACTCAGGAGCAATTA",30,81.45,6,-4.84,1,2.97,1.22,0,">1 nonsynonymous","N13L Y50D D90R G166Y",4
"lib2","SARS-CoV-2","GACTCAGTAAACACAA",13,86.8,9.75,-1.08,0.08,2.06,1.08,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","GACTCATCATGAACAT",9,60.89,6,-4.84,1.75,1.5,1.17,0.01,">1 nonsynonymous","K87N L95R I104Y",3
"lib2","SARS-CoV-2","GACTCATCTAGCTGTA",11,146.9,10.75,-0.09,0.04,2.93,1.06,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","GACTCATTGATTACAT",3,43.38,8.55,-2.29,0.23,1.5,1,0.02,">1 nonsynonymous","W23Q T46F",2
"lib2","SARS-CoV-2","GACTCATTTAAAGTAT",4,0.25,NA,NA,NA,NA,NA,NA,"stop","D90T A105* R136V",3
"lib2","SARS-CoV-2","GACTCATTTATAAAAA",12,3.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124F",1
"lib2","SARS-CoV-2","GACTCCAAACTCAACA",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36L T85Y",2
"lib2","SARS-CoV-2","GACTCCAAGCTTCCGT",1,35.07,8.53,-2.3,0.08,2.96,1.06,0,">1 nonsynonymous","I2G G117S G174W",3
"lib2","SARS-CoV-2","GACTCCACACCCCTTA",6,129.54,8.62,-2.22,0.09,2.15,1.04,0,">1 nonsynonymous","K48Q R73I",2
"lib2","SARS-CoV-2","GACTCCACACTAAGGT",9,45.8,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L5K A67S I80D L95C K132A",5
"lib2","SARS-CoV-2","GACTCCCATACACAAG",4,39.11,6,-4.84,1.21,1.5,1.19,0.02,">1 nonsynonymous","C102K P191N",2
"lib2","SARS-CoV-2","GACTCCCCAGAATGTT",1,8.19,9.91,-0.93,0.15,2.88,1,0.01,">1 nonsynonymous","A42P N64V N107A",3
"lib2","SARS-CoV-2","GACTCCCTATCCAGGA",13,110.43,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37N C49K Y91T D97L E154I F160V",6
"lib2","SARS-CoV-2","GACTCCCTGACTATTA",4,20.72,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9S P82S K87C L95M G117R T201I",6
"lib2","SARS-CoV-2","GACTCCGATTACAACT",4,38.99,10.93,0.1,0.07,2.93,1.08,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","GACTCCGCGATGCGCC",10,223.06,10.91,0.07,0.03,2.92,1.09,0,"1 nonsynonymous","V37Q",1
"lib2","SARS-CoV-2","GACTCCGGCGCCAATA",6,64.69,6,-4.84,1.85,1.5,1.2,0.01,">1 nonsynonymous","Y50I V71R Q84Y W106F I142M N157S",6
"lib2","SARS-CoV-2","GACTCCGGCGTGCACC",7,169.23,10.27,-0.57,0.07,2.62,1.12,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","GACTCCTAATGATCTT",3,38.75,6.01,-4.82,0.37,2.53,1.12,0,">1 nonsynonymous","C150S A190I",2
"lib2","SARS-CoV-2","GACTCCTGTTCCATAG",3,28.24,10.02,-0.81,0.13,2.55,1.1,0.01,">1 nonsynonymous","Y35I V65E T201W",3
"lib2","SARS-CoV-2","GACTCGAAACAAGGCC",1,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61D N120K N130F P149H",4
"lib2","SARS-CoV-2","GACTCGACGAAAAAGT",4,0.22,NA,NA,NA,NA,NA,NA,"stop","L5Q A42N V77L S200*",4
"lib2","SARS-CoV-2","GACTCGAGCATAAGTT",4,39.56,10.8,-0.03,0.06,2.98,1,0,">1 nonsynonymous","Y35I C61R",2
"lib2","SARS-CoV-2","GACTCGAGGCTAATAG",5,21.32,9.13,-1.71,0.2,1.59,1.12,0.02,">1 nonsynonymous","L57P Q84L",2
"lib2","SARS-CoV-2","GACTCGATATACGCAT",6,1.98,NA,NA,NA,NA,NA,NA,"stop","C31T C49Y G116Q I138A E154*",5
"lib2","SARS-CoV-2","GACTCGATATGGAATG",2,31.48,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L122P F134L P169S",3
"lib2","SARS-CoV-2","GACTCGATGACTTGAC",7,44.81,9.18,-1.65,0.15,1.82,1.1,0.01,">1 nonsynonymous","N107T L122I",2
"lib2","SARS-CoV-2","GACTCGCACGGCGCTA",5,16.72,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N1M A89L",2
"lib2","SARS-CoV-2","GACTCGCCAAAGCATA",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98H K114S R127N T148L T201R",5
"lib2","SARS-CoV-2","GACTCGCCATGAATTC",1,21.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R25Q C61Y A105W",3
"lib2","SARS-CoV-2","GACTCGCCTATAAGAT",2,16.15,6,-4.84,2,3,1.29,0.01,"1 nonsynonymous","V77D",1
"lib2","SARS-CoV-2","GACTCGCCTGTCTAAC",1,15.2,7.94,-2.9,0.18,2.84,1.03,0.01,">1 nonsynonymous","K56F F126E T201Y",3
"lib2","SARS-CoV-2","GACTCGCGCCTAACAG",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E I88F",2
"lib2","SARS-CoV-2","GACTCGGGACATTTCC",1,32.66,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A14H K87Y R136T Y175S",4
"lib2","SARS-CoV-2","GACTCGGGATCTATCG",1,15.32,10.25,-0.58,0.29,1.85,1,0.05,">1 nonsynonymous","N4A V52R Y66N",3
"lib2","SARS-CoV-2","GACTCGTCATTCATAA",2,80.21,9.73,-1.1,0.1,2.44,1,0,">1 nonsynonymous","G9T N30T I142L P149M",4
"lib2","SARS-CoV-2","GACTCTAAACGACATT",2,12.31,10.41,-0.42,0.1,2.81,1.09,0.01,">1 nonsynonymous","N40A S129Y",2
"lib2","SARS-CoV-2","GACTCTAATGTAATAC",5,56.29,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","P82S D112S",2
"lib2","SARS-CoV-2","GACTCTAATTGCAGAG",2,14,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","I2F G9T V71L P82T P96T F126R Y143M",7
"lib2","SARS-CoV-2","GACTCTACACAGTGAC",1,6.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F99C L111M G152H",3
"lib2","SARS-CoV-2","GACTCTACATATGCTT",1,5.73,10.55,-0.28,0.09,2.93,1,0,">1 nonsynonymous","S36L D90A",2
"lib2","SARS-CoV-2","GACTCTACCACTATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","R127T K198*",2
"lib2","SARS-CoV-2","GACTCTACCCTTAGAA",6,78.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95P G146C S184M",3
"lib2","SARS-CoV-2","GACTCTAGCATCTTAT",10,233.34,10.71,-0.13,0.03,2.9,1.08,0,">1 nonsynonymous","I2W D90K",2
"lib2","SARS-CoV-2","GACTCTAGTCTATCCG",5,55.65,9.39,-1.45,0.09,1.71,1.11,0,">1 nonsynonymous","Y35R T140P K198W",3
"lib2","SARS-CoV-2","GACTCTATATGCGGAA",6,62.83,10.34,-0.5,0.06,2.91,1.06,0,">1 nonsynonymous","L5D T63W",2
"lib2","SARS-CoV-2","GACTCTATCCCAACAA",1,9.75,10.21,-0.63,0.14,2.58,1.13,0.01,">1 nonsynonymous","D90F D98K",2
"lib2","SARS-CoV-2","GACTCTCTATTTCGAT",2,48.12,10.87,0.03,0.06,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTCTCTGGGACAAA",2,95.57,9.88,-0.95,0.05,2.69,1.05,0,"1 nonsynonymous","Q79R",1
"lib2","SARS-CoV-2","GACTCTGATTAAAAAA",7,82,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11E F70I",2
"lib2","SARS-CoV-2","GACTCTGCTAGGCATT",2,20.55,6.66,-4.18,0.45,1.5,1.15,0.03,">1 nonsynonymous","V11L L60P C102T G117A F134R N171A",6
"lib2","SARS-CoV-2","GACTCTGGCCCTTACT",5,0.12,NA,NA,NA,NA,NA,NA,"stop","C6K S41* D112*",3
"lib2","SARS-CoV-2","GACTCTTACCAGATAG",4,47.07,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K56G I88A N109L K128V",4
"lib2","SARS-CoV-2","GACTCTTATCAAGAGT",5,73.5,10.42,-0.42,0.03,2.93,1.04,0,">1 nonsynonymous","P54N L60A",2
"lib2","SARS-CoV-2","GACTCTTCGAAATATT",4,210.91,10.59,-0.25,0.03,2.85,1.1,0,">1 nonsynonymous","K132A E186H",2
"lib2","SARS-CoV-2","GACTCTTGAAAAATCA",2,5.71,6.13,-4.71,0.35,3,1.12,0.01,">1 nonsynonymous","Y66L A89N Y119F",3
"lib2","SARS-CoV-2","GACTCTTGCTTATTGA",2,19.82,9.57,-1.27,0.19,2.09,1.09,0.01,">1 nonsynonymous","S45N A89G",2
"lib2","SARS-CoV-2","GACTCTTTTGATTTAA",6,38.61,6,-4.84,1.61,1.5,1.18,0.01,">1 nonsynonymous","G9L S45L N64S G117F",4
"lib2","SARS-CoV-2","GACTGAAAAAGATAAA",2,79.2,10.83,-0.01,0.03,3,1,0,"1 nonsynonymous","V115H",1
"lib2","SARS-CoV-2","GACTGAAAGAAATAGG",8,50.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3D F44N G51Y Y91L",4
"lib2","SARS-CoV-2","GACTGAACAGTTGCAT",1,58.17,10.65,-0.19,0.06,2.86,1.12,0,">1 nonsynonymous","K56Q K94A",2
"lib2","SARS-CoV-2","GACTGAACCAATACCT",5,126.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16F A67N I142L Q168V",4
"lib2","SARS-CoV-2","GACTGAACCACTATAA",9,60.45,6.66,-4.17,0.42,1.5,1.22,0.02,">1 nonsynonymous","N4V F8H I28R G83F S129L",5
"lib2","SARS-CoV-2","GACTGAAGTACCTTTG",6,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29C N120L",2
"lib2","SARS-CoV-2","GACTGAATAAATGCCA",7,182.91,10.24,-0.6,0.05,2.8,1.07,0,">1 nonsynonymous","Y66S E141A",2
"lib2","SARS-CoV-2","GACTGAATATGAGTCG",4,52.89,10.31,-0.52,0.06,2.89,1.09,0,">1 nonsynonymous","E141G P169R",2
"lib2","SARS-CoV-2","GACTGAATCCAAAGAG",5,62.65,9.5,-1.34,0.09,2.37,1.08,0,">1 nonsynonymous","N107D Y123K",2
"lib2","SARS-CoV-2","GACTGACAACCAATTG",10,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I V11I S36Y T55R V103K",5
"lib2","SARS-CoV-2","GACTGACACTGTTACA",2,29.43,10.76,-0.07,0.06,2.97,1.07,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","GACTGACCAATGTACC",20,280.05,6.06,-4.78,0.46,1.5,1.14,0,">1 nonsynonymous","V32R Y39M S43D D68G A81V K132G G174T",7
"lib2","SARS-CoV-2","GACTGACGGTTAGAGG",19,115.73,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D34A F44N P96L F160W T201C",5
"lib2","SARS-CoV-2","GACTGACGTTGAGAAC",3,124.45,8.17,-2.67,0.13,1.58,1.07,0.01,">1 nonsynonymous","D75S Q176I",2
"lib2","SARS-CoV-2","GACTGACTCCTAAACC",3,86.06,10.09,-0.75,0.08,2.13,1.01,0,">1 nonsynonymous","W106T Y123M V153K",3
"lib2","SARS-CoV-2","GACTGAGAATAAACCT",3,12.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14V V20R D97H A105F G166I",5
"lib2","SARS-CoV-2","GACTGAGACAAACGAG",12,78.79,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D68F R73C S113K Q144I",4
"lib2","SARS-CoV-2","GACTGAGCGTTCGTTC",9,3.59,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","GACTGAGCTTAACAGA",3,22.85,8.88,-1.95,0.17,1.96,1.08,0.02,"1 nonsynonymous","P161M",1
"lib2","SARS-CoV-2","GACTGAGGAAGTCTAA",13,6.23,NA,NA,NA,NA,NA,NA,"stop","Y21H N107* S147N Y178S",4
"lib2","SARS-CoV-2","GACTGAGTACAAACCG",12,112.93,8.68,-2.15,0.11,2.32,1.08,0,">1 nonsynonymous","S53V R73S E135V Q163K",4
"lib2","SARS-CoV-2","GACTGAGTGTCCCAAA",12,3.88,NA,NA,NA,NA,NA,NA,"stop","S45* G116V Y143L",3
"lib2","SARS-CoV-2","GACTGATGTCGGGGAG",3,45.11,10.16,-0.67,0.03,2.94,1,0,">1 nonsynonymous","D90A Y121L",2
"lib2","SARS-CoV-2","GACTGCAACCTACGAT",13,150.63,8.34,-2.49,0.22,1.5,1,0.02,">1 nonsynonymous","C61Q G83T A89Y",3
"lib2","SARS-CoV-2","GACTGCACAACACGCA",4,38.29,10.8,-0.04,0.06,2.97,1.05,0,"1 nonsynonymous","Y66V",1
"lib2","SARS-CoV-2","GACTGCATGATAGTTA",9,133.24,9.87,-0.96,0.07,2.25,1.05,0,">1 nonsynonymous","N40P P133M",2
"lib2","SARS-CoV-2","GACTGCCACGCAGCAG",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W V77H K87R V103W",4
"lib2","SARS-CoV-2","GACTGCCGTCTAAATA",4,78.98,8.61,-2.23,0.15,1.64,1.09,0.01,">1 nonsynonymous","S29A S45L L95I G155N",4
"lib2","SARS-CoV-2","GACTGCCTTTTATAGA",6,67.28,9.06,-1.78,0.11,2.9,1.06,0.01,">1 nonsynonymous","V37M F47Y Y119G",3
"lib2","SARS-CoV-2","GACTGCGAATAGAACC",8,5.13,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib2","SARS-CoV-2","GACTGCGCGCTGGCCA",12,67.15,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","A33K T55I D68Q",3
"lib2","SARS-CoV-2","GACTGCGTGACTGGAC",11,278.91,8.33,-2.51,0.15,1.89,1.11,0.01,">1 nonsynonymous","V11L N58S Q176L",3
"lib2","SARS-CoV-2","GACTGCTAAATAGCAG",21,148.46,6,-4.84,1.88,1.5,1.13,0,">1 nonsynonymous","V11A V20W K132L Y143T",4
"lib2","SARS-CoV-2","GACTGCTCGCTTGTAA",7,58.51,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14C V32Q S43E Y50L D97A F160G",6
"lib2","SARS-CoV-2","GACTGCTGTTAAAAAA",5,147.99,10.55,-0.29,0.05,2.94,1.05,0,"1 nonsynonymous","D98C",1
"lib2","SARS-CoV-2","GACTGCTGTTAAGATA",3,38.03,7.79,-3.04,0.23,1.69,1.13,0.02,">1 nonsynonymous","G9V Y121N V173F H189C",4
"lib2","SARS-CoV-2","GACTGCTTAGAGAGAT",3,1.81,NA,NA,NA,NA,NA,NA,"stop","L5Y S41*",2
"lib2","SARS-CoV-2","GACTGGCAGCGGTGTC",5,62.98,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10H P161L L183V",3
"lib2","SARS-CoV-2","GACTGGCCGTACTACC",16,5.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P G9L T15L K48L P54H A89N V103L K128W P133R S200R",10
"lib2","SARS-CoV-2","GACTGGCCTAATAAGG",1,14.08,6,-4.84,1.21,1.5,1.1,0.02,">1 nonsynonymous","C49L A105W F156W",3
"lib2","SARS-CoV-2","GACTGGCTTCCCAATA",2,111.65,10.83,0,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","GACTGGGGACGATGAG",21,129.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6A A14S D112Q Y119W P191S",5
"lib2","SARS-CoV-2","GACTGGGTAAAATTTG",3,51.29,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D34W Y66L G146W T148V P161F",5
"lib2","SARS-CoV-2","GACTGGGTTCTCTAAC",18,155.49,9.75,-1.09,0.04,2.08,1.05,0,">1 nonsynonymous","I2S T85D D98L T148L L187V",5
"lib2","SARS-CoV-2","GACTGGTATCACCCCA",16,42.82,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","I72P F99K G155M",3
"lib2","SARS-CoV-2","GACTGGTCGCAAAATA",5,1.51,NA,NA,NA,NA,NA,NA,"stop","Y50T K128L T148S Y178*",4
"lib2","SARS-CoV-2","GACTGGTTATCTAAAA",1,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R R179G",2
"lib2","SARS-CoV-2","GACTGTAAATTCCTAA",5,49.73,6,-4.84,2,1.78,1.15,0,">1 nonsynonymous","I80G G116E Y178S",3
"lib2","SARS-CoV-2","GACTGTAATGTCCTTT",12,121.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L95Q Y119M",2
"lib2","SARS-CoV-2","GACTGTACCGTTGACG",9,172.25,10.57,-0.27,0.04,2.91,1.09,0,">1 nonsynonymous","F160L G196L",2
"lib2","SARS-CoV-2","GACTGTACGAACATGT",3,128.09,10.79,-0.04,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTGTACTAAACGCT",6,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59N S113P F134C",3
"lib2","SARS-CoV-2","GACTGTACTACAGTCA",4,31.78,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","D68E A89S T100F",3
"lib2","SARS-CoV-2","GACTGTAGTTAGGTGA",3,64.42,10.65,-0.19,0.06,2.95,1.03,0,">1 nonsynonymous","N1T V32K T46S",3
"lib2","SARS-CoV-2","GACTGTATAAACTATG",3,75.09,10.61,-0.22,0.07,2.88,1.08,0,">1 nonsynonymous","D97T K132E P149H",3
"lib2","SARS-CoV-2","GACTGTATGGCACTCC",9,1.59,NA,NA,NA,NA,NA,NA,"stop","D34* T63D F99G V182Y K198S",5
"lib2","SARS-CoV-2","GACTGTATTACAGAAA",2,30.73,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","V37L Q84L W106A G166W",4
"lib2","SARS-CoV-2","GACTGTCACAGATAGT",4,23.77,10.84,0,0.08,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTGTCATAAGAATG",2,0.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G166W",1
"lib2","SARS-CoV-2","GACTGTCCAATGGGCA",4,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V I104Q L122N",3
"lib2","SARS-CoV-2","GACTGTCCTATCCGCG",11,123.65,7.74,-3.1,0.17,1.5,1.09,0.01,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","GACTGTCGATCAAACG",10,170.5,10.33,-0.51,0.03,2.85,1.03,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","GACTGTCTAAAATTAC",2,6.22,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","GACTGTGTAAACCTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F L60A",2
"lib2","SARS-CoV-2","GACTGTTATTACAAAC",1,14.12,6,-4.84,2,1.5,1.37,0.04,">1 nonsynonymous","V11C W106G L122V D137E F167S",5
"lib2","SARS-CoV-2","GACTGTTCCCCGTAAT",8,131.48,9.97,-0.87,0.06,2.23,1.02,0,">1 nonsynonymous","V37A C49T T201S",3
"lib2","SARS-CoV-2","GACTGTTTACCGCACG",5,39.95,6.04,-4.79,1.34,1.5,1.22,0.03,">1 nonsynonymous","D90K E135S S164L V173S",4
"lib2","SARS-CoV-2","GACTGTTTGACACAGA",9,196.96,10.61,-0.23,0.04,2.9,1.09,0,">1 nonsynonymous","A42S T201D",2
"lib2","SARS-CoV-2","GACTTAAACTACAGAT",6,47.19,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","E10K K48W V71E N107I K114C I142S",6
"lib2","SARS-CoV-2","GACTTAAAGACACAAC",10,156.05,10.67,-0.16,0.03,2.91,1.07,0,">1 nonsynonymous","A22K D98H",2
"lib2","SARS-CoV-2","GACTTAAATGTTCAAT",16,239.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Q84E T170E Y175K",3
"lib2","SARS-CoV-2","GACTTAACAACAGTGA",7,91.19,8.77,-2.07,0.1,1.85,1.12,0,">1 nonsynonymous","A33K L60V R78F Q84V",4
"lib2","SARS-CoV-2","GACTTAACACGCCTCG",9,37,7.34,-3.5,0.43,1.5,1.05,0.06,">1 nonsynonymous","F62S P82L F185D",3
"lib2","SARS-CoV-2","GACTTAACATATTTTC",4,8.84,NA,NA,NA,NA,NA,NA,"stop","E10N Y35*",2
"lib2","SARS-CoV-2","GACTTAACCAAGGCGT",1,54.67,10.82,-0.02,0.04,2.97,1.04,0,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","GACTTAACCGTACATT",3,0.27,NA,NA,NA,NA,NA,NA,"stop","P149M S184*",2
"lib2","SARS-CoV-2","GACTTAACGATTCATA",4,115.76,10.89,0.05,0.05,2.95,1.07,0,">1 nonsynonymous","D59E T201H",2
"lib2","SARS-CoV-2","GACTTAAGGATGTAGG",5,6.34,NA,NA,NA,NA,NA,NA,"stop","S19* C49S D68R D90A K114C S200*",6
"lib2","SARS-CoV-2","GACTTAAGGGCCCTGC",11,164.88,8.43,-2.41,0.07,1.88,1.07,0,">1 nonsynonymous","G51L N157S",2
"lib2","SARS-CoV-2","GACTTAAGGTCTGATG",14,167.66,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E141W G172R S200F",3
"lib2","SARS-CoV-2","GACTTAAGTACCGACA",3,9.48,11.05,0.21,0.11,2.81,1.19,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GACTTAATATTAACTT",7,78.64,10.78,-0.06,0.04,2.9,1.1,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","GACTTAATCATACTTA",3,46.7,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V20R G146E Y178S",3
"lib2","SARS-CoV-2","GACTTAATCCATACCT",2,48.45,10.91,0.07,0.07,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTTACAAACATCTG",4,59.39,8.68,-2.16,0.1,1.99,1.18,0.01,">1 nonsynonymous","Y39H G174L V181L",3
"lib2","SARS-CoV-2","GACTTACATTGACAAC",9,151.31,10.85,0.01,0.05,2.96,1.04,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","GACTTACCAAAACATT",2,0.79,NA,NA,NA,NA,NA,NA,"stop","N107P I138*",2
"lib2","SARS-CoV-2","GACTTACCAAAGTTTG",4,59.73,10.62,-0.21,0.05,2.93,1.03,0,">1 nonsynonymous","S41T P149V C195T K199M",4
"lib2","SARS-CoV-2","GACTTACCAATCCATA",4,48.85,6.08,-4.76,0.74,1.5,1.21,0.01,">1 nonsynonymous","T55G A81F I88H K94P T100S",5
"lib2","SARS-CoV-2","GACTTACCCTCAAGAG",2,30.54,9.06,-1.77,0.16,1.72,1.07,0.01,">1 nonsynonymous","A89H G152T",2
"lib2","SARS-CoV-2","GACTTACCGAGAGTCA",11,92.37,9.97,-0.86,0.06,2.32,1.01,0,">1 nonsynonymous","T46L F134I",2
"lib2","SARS-CoV-2","GACTTACGACAGATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2* S36V F99L",3
"lib2","SARS-CoV-2","GACTTACGCGACATAT",9,58.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44T G74T G117R",3
"lib2","SARS-CoV-2","GACTTACGTGATAGCA",1,24.66,9.55,-1.29,0.11,2,1,0.01,">1 nonsynonymous","N107S L162M",2
"lib2","SARS-CoV-2","GACTTAGAAAATCACG",6,21.74,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","P7L N24V A89R V181K",4
"lib2","SARS-CoV-2","GACTTAGAATTATGTC",3,17.73,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","F99R S184D",2
"lib2","SARS-CoV-2","GACTTAGCATCATATC",12,6.8,NA,NA,NA,NA,NA,NA,"stop","G9L A89L K128R I142* F160R",5
"lib2","SARS-CoV-2","GACTTAGCCAACACTG",2,49.24,10.84,0.01,0.08,2.85,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GACTTAGGGTGAGATT",5,86.6,10.83,0,0.04,2.86,1.13,0,"1 nonsynonymous","T15S",1
"lib2","SARS-CoV-2","GACTTATACAATGTTG",2,134.29,10.82,-0.02,0.03,2.92,1.08,0,"1 nonsynonymous","K128G",1
"lib2","SARS-CoV-2","GACTTATACGACCAGA",14,114.39,9.01,-1.82,0.15,1.6,1.07,0.01,">1 nonsynonymous","I2T Y35T A89S I142H",4
"lib2","SARS-CoV-2","GACTTATCCCACACCG",9,136.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F62V D90T G146I",3
"lib2","SARS-CoV-2","GACTTATCTAATAACT",4,19.35,9.45,-1.38,0.28,1.5,1.07,0.05,">1 nonsynonymous","T46S Y50C F160H",3
"lib2","SARS-CoV-2","GACTTCAACCAAAATT",4,105.23,6.47,-4.37,0.75,1.5,1.26,0.04,">1 nonsynonymous","T55L G83Y Y91T S139D L188V",5
"lib2","SARS-CoV-2","GACTTCAATTGACCGA",11,1.73,NA,NA,NA,NA,NA,NA,"stop","Y35A D59* G83A K94L D112K N120F R136S F160I",8
"lib2","SARS-CoV-2","GACTTCACACAAGCGT",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W S43P D68E A105C",4
"lib2","SARS-CoV-2","GACTTCACTAATCAGT",3,29.45,9.5,-1.33,0.09,1.92,1.05,0,">1 nonsynonymous","T3I F12A L122K G155H",4
"lib2","SARS-CoV-2","GACTTCAGAAAAAGTT",3,81.83,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F8K P161T",2
"lib2","SARS-CoV-2","GACTTCAGTGATAGAC",2,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64W V181Y",2
"lib2","SARS-CoV-2","GACTTCATAAATTCAG",3,73.07,7.88,-2.96,0.4,1.5,1.18,0.05,">1 nonsynonymous","P7H N92S F99I Y143N",4
"lib2","SARS-CoV-2","GACTTCATCGAAGTCA",14,141.87,10.12,-0.71,0.06,2.63,1.05,0,">1 nonsynonymous","A42V F99Y",2
"lib2","SARS-CoV-2","GACTTCATTATGGATA",11,4.58,NA,NA,NA,NA,NA,NA,"stop","T3L V32G C49* G83C D97R T100I",6
"lib2","SARS-CoV-2","GACTTCCATTTAATTA",4,12.75,8.21,-2.63,0.33,1.69,1.01,0.06,">1 nonsynonymous","Q84K I104K",2
"lib2","SARS-CoV-2","GACTTCGAAATGAGAG",2,21.59,10.38,-0.45,0.1,2.94,1.08,0,">1 nonsynonymous","N4D F12V",2
"lib2","SARS-CoV-2","GACTTCGATATAACCT",1,20.05,7.66,-3.18,0.08,2.14,1.05,0,">1 nonsynonymous","F44N Y119C Q163R",3
"lib2","SARS-CoV-2","GACTTCGATATTGCCC",8,91.22,10.68,-0.15,0.04,2.95,1.07,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GACTTCGGACTACGTG",1,56.17,10.63,-0.2,0.06,2.9,1.08,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","GACTTCGGCCTGCTTC",1,22.7,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C49K G86T",2
"lib2","SARS-CoV-2","GACTTCGTCACCAAAA",9,183.08,10.67,-0.16,0.03,2.92,1.07,0,"1 nonsynonymous","V52Y",1
"lib2","SARS-CoV-2","GACTTCTAGCTAGCAC",16,187.52,9.49,-1.35,0.03,2.89,1.07,0,">1 nonsynonymous","F134G G152A Q168S G174R",4
"lib2","SARS-CoV-2","GACTTCTCAAATGGAT",20,2.22,NA,NA,NA,NA,NA,NA,"stop","T63N A81S G86* P133L I142N",5
"lib2","SARS-CoV-2","GACTTCTCTAAAGAGT",2,89.26,9.74,-1.1,0.05,2.89,1.06,0,">1 nonsynonymous","C6R K87T",2
"lib2","SARS-CoV-2","GACTTCTTTAGATAAC",11,49.62,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R16L F167D L183T",3
"lib2","SARS-CoV-2","GACTTGAAGTTATTTT",2,0.58,NA,NA,NA,NA,NA,NA,"stop","N24K G83V K87* A105I S147T",5
"lib2","SARS-CoV-2","GACTTGACAAGCTTTA",7,177.86,10.29,-0.55,0.03,2.96,1.04,0,">1 nonsynonymous","P149L F156V",2
"lib2","SARS-CoV-2","GACTTGAGGAAAAATT",5,147.33,10.58,-0.26,0.03,2.93,1.07,0,"1 nonsynonymous","P169S",1
"lib2","SARS-CoV-2","GACTTGAGTTTTATAA",5,29.66,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19Y S41L C158K",3
"lib2","SARS-CoV-2","GACTTGATCCTTGGGG",2,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141Y S184C",2
"lib2","SARS-CoV-2","GACTTGATGCCGACTT",8,33.48,7.76,-3.07,0.26,1.5,1.02,0.02,">1 nonsynonymous","C6N F99L K114S",3
"lib2","SARS-CoV-2","GACTTGCAAAGGCTTA",22,159.91,9.64,-1.2,0.06,1.9,1.07,0,">1 nonsynonymous","G83F W106V",2
"lib2","SARS-CoV-2","GACTTGCACGATAAAA",1,11.95,6,-4.84,2,1.5,1.17,0.08,">1 nonsynonymous","F44N N64K Y123E E154D F167K",5
"lib2","SARS-CoV-2","GACTTGCATCCAATGA",1,16.65,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N157T F167L",2
"lib2","SARS-CoV-2","GACTTGCATTCCCTGA",10,119.26,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V71R Y123D K128N E154M F160C",5
"lib2","SARS-CoV-2","GACTTGCTATGCTTCC",7,72.25,10.71,-0.12,0.06,2.87,1.16,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","GACTTGGAACGATTAC",4,48.87,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V32L F99V N107F D112L S164K",5
"lib2","SARS-CoV-2","GACTTGGAATATACTA",2,8.95,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17R K26R G101W A145G P149L G172V",6
"lib2","SARS-CoV-2","GACTTGGCCAAAAGCG",1,24.1,10.73,-0.11,0.06,2.93,1.08,0,">1 nonsynonymous","T3E R27S",2
"lib2","SARS-CoV-2","GACTTGTAATGCCCAC",4,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87L V103N L122M",3
"lib2","SARS-CoV-2","GACTTGTAATTAATCA",5,59.52,9.92,-0.91,0.1,2.53,1.07,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","GACTTGTACCTAACTA",8,3.53,NA,NA,NA,NA,NA,NA,"stop","T15D F47L A67V A89C D137I Y175*",6
"lib2","SARS-CoV-2","GACTTGTAGTATCAGC",2,19.1,10.79,-0.05,0.08,2.91,1.13,0,"1 nonsynonymous","V153G",1
"lib2","SARS-CoV-2","GACTTGTGTTAGTGGA",5,30.92,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","K26L K114R G146Q L162G",4
"lib2","SARS-CoV-2","GACTTTAACCCACCTC",1,22.8,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","GACTTTAATAAATCCA",3,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D L38P S45Y A81V P96N I138R",6
"lib2","SARS-CoV-2","GACTTTAATACAGGAC",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W T85G",2
"lib2","SARS-CoV-2","GACTTTACTAAAAACG",1,5.24,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","T3M D90S S113V G155M",4
"lib2","SARS-CoV-2","GACTTTAGCAAAAATT",2,21.18,9.71,-1.12,0.1,2.06,1.03,0.01,">1 nonsynonymous","N64E A81S K87F K128Q E141V A190H",6
"lib2","SARS-CoV-2","GACTTTAGCATGACAA",5,47.37,6.97,-3.86,0.38,1.5,1.12,0.03,">1 nonsynonymous","T3F Q84T N107I",3
"lib2","SARS-CoV-2","GACTTTAGCGACCTGA",7,92.35,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V20R S129N L162Y K199I",4
"lib2","SARS-CoV-2","GACTTTAGCGGAAAAG",12,98.08,10.24,-0.6,0.02,2.93,1.04,0,">1 nonsynonymous","G116L P149T",2
"lib2","SARS-CoV-2","GACTTTATACTCAAAC",2,45.86,7.11,-3.72,0.27,1.5,1.03,0.02,">1 nonsynonymous","A14R A18S D59G D112V E154L P197N",6
"lib2","SARS-CoV-2","GACTTTATTAATTGAT",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P T63L A89R N151F",4
"lib2","SARS-CoV-2","GACTTTCAACCACATT",2,13.99,10.84,0,0.08,2.88,1.16,0,">1 nonsynonymous","L5K K56E Q84S L122T N151L",5
"lib2","SARS-CoV-2","GACTTTCAAGATGTAG",15,194.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12R V103Y N107V Y119L P149G",5
"lib2","SARS-CoV-2","GACTTTCAATGCCGCC",2,18.96,8.59,-2.25,0.17,2.05,1.12,0.01,">1 nonsynonymous","A18R S41K F126I S139D",4
"lib2","SARS-CoV-2","GACTTTCATTGATTCC",1,36.45,8.75,-2.09,0.12,1.88,1.1,0,">1 nonsynonymous","Q84F G155I",2
"lib2","SARS-CoV-2","GACTTTCGTAACACAG",4,0.4,NA,NA,NA,NA,NA,NA,"stop","F12* D59S",2
"lib2","SARS-CoV-2","GACTTTGAACATAACA",3,14.63,10.99,0.15,0.07,3,1.03,0,">1 nonsynonymous","T55A V153F Y175F P197R",4
"lib2","SARS-CoV-2","GACTTTGTCCCCGTGA",1,50.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36I P96Q Q176S P197K",4
"lib2","SARS-CoV-2","GACTTTTATCTGAAAT",8,55.1,9.82,-1.01,0.13,2.11,1.08,0.01,">1 nonsynonymous","F62K S139K P149S",3
"lib2","SARS-CoV-2","GACTTTTCAGCAACGC",28,422.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N30L S69K V77G K94A",4
"lib2","SARS-CoV-2","GACTTTTTAGGTTCTT",1,26.68,10.77,-0.06,0.09,2.97,1,0,">1 nonsynonymous","K128A K199L",2
"lib2","SARS-CoV-2","GACTTTTTATTAACAG",16,64.85,6.29,-4.54,0.36,1.5,1.13,0.01,">1 nonsynonymous","Y91V F126S",2
"lib2","SARS-CoV-2","GACTTTTTCCATCGAT",4,44.97,10.79,-0.04,0.06,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAAAAAACTCATAG",4,185.92,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C61K G101F P177Q",3
"lib2","SARS-CoV-2","GAGAAAAACTAACAAC",2,22.77,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F17S G83R D90I",3
"lib2","SARS-CoV-2","GAGAAAAACTCTAAAG",8,170.85,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F47M K87P R124V",3
"lib2","SARS-CoV-2","GAGAAAAACTGCGGCA",3,80.53,10.25,-0.58,0.03,2.9,1.05,0,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","GAGAAAAAGTGGGAAA",4,63.68,10.7,-0.13,0.05,2.99,1.03,0,"1 nonsynonymous","T140L",1
"lib2","SARS-CoV-2","GAGAAAAATACCGTTC",4,43.88,10.77,-0.07,0.06,2.9,1.12,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","GAGAAAAATGAAGGGA",5,33.56,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","S45T L122E R127S R136T T170K",5
"lib2","SARS-CoV-2","GAGAAAACATAAACTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","GAGAAAACCTCTTTGG",6,15.44,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44S C49H L187Q",3
"lib2","SARS-CoV-2","GAGAAAACGCCGATCG",2,28.81,8.7,-2.14,0.21,1.62,1.09,0.01,">1 nonsynonymous","G83I E141G G152Y",3
"lib2","SARS-CoV-2","GAGAAAAGACCGATAA",4,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84P V103Y",2
"lib2","SARS-CoV-2","GAGAAAATAAGTAATT",4,7.25,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A14R A42I N64M P82R A190Y",5
"lib2","SARS-CoV-2","GAGAAAATACCAATCA",3,65.93,6,-4.84,1.11,1.5,1.12,0.01,">1 nonsynonymous","N40I K87A Y119N N130K Y143S",5
"lib2","SARS-CoV-2","GAGAAAATACTATAAC",3,42.3,10.48,-0.36,0.05,3,1.01,0,">1 nonsynonymous","G9C C61N R78K",3
"lib2","SARS-CoV-2","GAGAAAATAGAACAAT",5,143.17,10.72,-0.11,0.05,2.94,1.07,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","GAGAAAATGGACTCCG",8,276.24,10.83,-0.01,0.05,2.93,1.09,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","GAGAAAATGTACCTGT",7,120.17,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A14R N92L L122Y P177R",4
"lib2","SARS-CoV-2","GAGAAACAACATAACA",3,129.29,10.42,-0.42,0.03,2.89,1.03,0,"1 nonsynonymous","R136V",1
"lib2","SARS-CoV-2","GAGAAACATTATTAAT",12,62.51,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","D34Y F44S G152F V180T",4
"lib2","SARS-CoV-2","GAGAAACCCACAGATT",16,103.02,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V20Y V115M T201S",3
"lib2","SARS-CoV-2","GAGAAACGACACTAAA",1,16.79,9.81,-1.02,0.16,2.64,1.14,0.01,">1 nonsynonymous","G9I I138F",2
"lib2","SARS-CoV-2","GAGAAACGATTATCCG",9,29.83,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","L60P I104D K114V",3
"lib2","SARS-CoV-2","GAGAAACGCATAAAGT",2,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L F47S W106R N118Y",4
"lib2","SARS-CoV-2","GAGAAACGTCCAAGGG",2,19.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I88N K114L T148M",3
"lib2","SARS-CoV-2","GAGAAACTAAATGGAC",8,49.5,8.5,-2.34,0.11,1.5,1.06,0.01,">1 nonsynonymous","A81V A105T A145S E154L",4
"lib2","SARS-CoV-2","GAGAAACTACGATACT",6,43.92,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6N R25V F99P",3
"lib2","SARS-CoV-2","GAGAAACTAGACTTCG",5,45.72,9.62,-1.21,0.06,2.31,1.04,0,">1 nonsynonymous","N1S C61N V77T T148G",4
"lib2","SARS-CoV-2","GAGAAACTTAGCGTTC",4,9.13,6.31,-4.53,1.2,3,1.08,0,">1 nonsynonymous","V32H I88M E135L",3
"lib2","SARS-CoV-2","GAGAAAGAACATGAAT",1,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56S Q176F",2
"lib2","SARS-CoV-2","GAGAAAGACACAACGC",3,25.49,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D137C P161G",2
"lib2","SARS-CoV-2","GAGAAAGACTGAAAAC",3,16.54,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","E10V W106S E135V",3
"lib2","SARS-CoV-2","GAGAAAGAGAGTGGAC",1,13.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6K S19G F44L",3
"lib2","SARS-CoV-2","GAGAAAGAGGCTAATT",8,2.1,NA,NA,NA,NA,NA,NA,"stop","N4W S113D S139N G172* T201S",5
"lib2","SARS-CoV-2","GAGAAAGCTCGAGCCT",3,14.41,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L5M P96R A105L K132Y N171S",5
"lib2","SARS-CoV-2","GAGAAAGGATAACAAA",2,11.3,8.42,-2.42,0.32,1.5,1.03,0.06,">1 nonsynonymous","A89L V173I",2
"lib2","SARS-CoV-2","GAGAAAGGATAATCAC",10,17.22,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N13M V103C L122G C158R A192Q",5
"lib2","SARS-CoV-2","GAGAAAGTGCGGTCTT",12,130.32,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9N A105L Y119L S139R V153E",5
"lib2","SARS-CoV-2","GAGAAAGTGTACCACC",3,2.16,NA,NA,NA,NA,NA,NA,"stop","A22E K48* R136T",3
"lib2","SARS-CoV-2","GAGAAATAAAAGTTAA",9,4.84,NA,NA,NA,NA,NA,NA,"stop","T15F N157* F185Y",3
"lib2","SARS-CoV-2","GAGAAATAATAACTAA",2,50.86,10.15,-0.68,0.07,2.6,1.07,0,">1 nonsynonymous","L5Y V37T L60P Q84K T201M",5
"lib2","SARS-CoV-2","GAGAAATACCACACGA",3,35.2,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N4L V37I K48P N92Y G101S",5
"lib2","SARS-CoV-2","GAGAAATACCGACATC",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69T I104K G116E",3
"lib2","SARS-CoV-2","GAGAAATACTCCCGAG",2,10.18,6.62,-4.21,0.49,1.5,1.13,0.04,">1 nonsynonymous","G9K Y119C R127S S184I",4
"lib2","SARS-CoV-2","GAGAAATACTGCAAAC",6,32.77,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","L5V A14L C49R",3
"lib2","SARS-CoV-2","GAGAAATATCTATGCG",5,16.07,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","T85H D112N C150P",3
"lib2","SARS-CoV-2","GAGAAATCAATCATAG",2,67.05,10.52,-0.32,0.04,2.95,1.04,0,">1 nonsynonymous","A22Q S53T P149L E154T",4
"lib2","SARS-CoV-2","GAGAAATCCATCTTTA",3,67.54,10.35,-0.48,0.04,2.91,1.1,0,">1 nonsynonymous","N4S K87A D98K",3
"lib2","SARS-CoV-2","GAGAAATCCCGTATTT",3,85.98,10.88,0.04,0.05,2.86,1.15,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","GAGAAATCGATAGCGT",5,57.91,8.25,-2.59,0.18,1.78,1.07,0.01,">1 nonsynonymous","T3S R73S P96E",3
"lib2","SARS-CoV-2","GAGAAATCGTATAAAT",18,107.18,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C61D N110F P161F",3
"lib2","SARS-CoV-2","GAGAAATGGAAGAGAA",7,52.76,7.33,-3.5,0.12,1.95,1.11,0,">1 nonsynonymous","S41L R73S I142N",3
"lib2","SARS-CoV-2","GAGAAATTACGAAACG",3,52.68,10.67,-0.17,0.04,2.89,1.06,0,">1 nonsynonymous","I2L R27Q T100K N130M",4
"lib2","SARS-CoV-2","GAGAAATTCGCAAGGA",2,23.71,9.37,-1.47,0.15,1.8,1.14,0.01,">1 nonsynonymous","L5D S45V T85L",3
"lib2","SARS-CoV-2","GAGAAATTGACCCACA",8,3.51,NA,NA,NA,NA,NA,NA,"stop","R16F A105D Y121N Y123* K128I T148Y Q168A",7
"lib2","SARS-CoV-2","GAGAAATTTACAACAG",1,42.56,7.67,-3.16,0.2,1.5,1.04,0.01,">1 nonsynonymous","S36W K128I Q176K",3
"lib2","SARS-CoV-2","GAGAACAAAAACGAAT",1,6.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8Y T63L K94T",3
"lib2","SARS-CoV-2","GAGAACAAATGCCTAG",2,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W V103C",2
"lib2","SARS-CoV-2","GAGAACAACAAGTACA",2,33.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90T L95P N110I",3
"lib2","SARS-CoV-2","GAGAACAACTATATCA",3,13.02,NA,NA,NA,NA,NA,NA,"stop","N171P Y178* A190N",3
"lib2","SARS-CoV-2","GAGAACAACTGAAAAG",3,1.07,NA,NA,NA,NA,NA,NA,"stop","L5* G117S S129H V173*",4
"lib2","SARS-CoV-2","GAGAACACATAGTTTA",6,29.28,6.13,-4.71,0.42,3,1.11,0.01,">1 nonsynonymous","N92A L131D",2
"lib2","SARS-CoV-2","GAGAACACATGTCCTT",2,30.76,10.83,-0.01,0.09,2.78,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAACAGCATTGGGA",2,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T V52S P149M",3
"lib2","SARS-CoV-2","GAGAACAGCTCCAACG",16,146.09,10.14,-0.7,0.04,2.66,1.01,0,">1 nonsynonymous","L5V R16I A22V K128H",4
"lib2","SARS-CoV-2","GAGAACATCTAAGAAG",14,51.91,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P96M D112V P169V",3
"lib2","SARS-CoV-2","GAGAACATGGAAATCC",4,47.28,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L5N F12V Y39S Y93M G174S",5
"lib2","SARS-CoV-2","GAGAACATTGGATAGA",9,139.41,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","Y35T N40W P54I W106S Y119R Y178S",6
"lib2","SARS-CoV-2","GAGAACCAAAAGCCTT",6,0.32,NA,NA,NA,NA,NA,NA,"stop","R27T L57R G83* V103E S113Y L187Y",6
"lib2","SARS-CoV-2","GAGAACCAACGAGTAA",7,32.27,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y50I E141D T170W V180T",4
"lib2","SARS-CoV-2","GAGAACCAAGTCGTAC",2,6.8,8.05,-2.78,0.71,1.5,1.31,0.06,"1 nonsynonymous","P82F",1
"lib2","SARS-CoV-2","GAGAACCACCGTTCGA",13,205.1,10.16,-0.67,0.06,2.7,1.03,0,">1 nonsynonymous","W106M N130Q",2
"lib2","SARS-CoV-2","GAGAACCAGTTTAAGA",7,75.03,10.85,0.02,0.04,3,1.04,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","GAGAACCATTGAATTC",12,59.82,6,-4.84,2,1.5,1.35,0.03,">1 nonsynonymous","F8E K114S S139G P161L Y178R",5
"lib2","SARS-CoV-2","GAGAACCCTTAGGGTA",1,44.72,10.86,0.02,0.08,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAACCGACAGCAAG",8,144.8,10.84,0.01,0.05,2.94,1.07,0,">1 nonsynonymous","R16H P54S E154R",3
"lib2","SARS-CoV-2","GAGAACCGACTAACTA",1,69.92,10.91,0.08,0.06,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAACCGGCAACGTA",4,0.84,NA,NA,NA,NA,NA,NA,"stop","P7* C158D T201M",3
"lib2","SARS-CoV-2","GAGAACCGGGTAGACA",7,98.68,10.89,0.06,0.05,2.92,1.1,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","GAGAACCTCGCAACTT",14,101.67,9.45,-1.38,0.08,1.83,1.11,0,">1 nonsynonymous","S69Q T100W",2
"lib2","SARS-CoV-2","GAGAACCTTAATAATG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S41* K56Q N110I N130G",4
"lib2","SARS-CoV-2","GAGAACCTTTTGAATG",3,70.5,8.95,-1.89,0.06,2.93,1.09,0,">1 nonsynonymous","G9F K48S Y119N",3
"lib2","SARS-CoV-2","GAGAACGAAATAATTT",3,16.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D98N V103Y",2
"lib2","SARS-CoV-2","GAGAACGAAATTGGAC",8,102.09,6.02,-4.82,0.96,1.5,1.18,0.02,">1 nonsynonymous","N13I F17A Y39L K87C",4
"lib2","SARS-CoV-2","GAGAACGAGATCCAAT",1,7.95,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","Y93C D112L",2
"lib2","SARS-CoV-2","GAGAACTACAAGAGAT",5,57.11,10.86,0.03,0.12,2.78,1.15,0,">1 nonsynonymous","V37K K128R T201W",3
"lib2","SARS-CoV-2","GAGAACTCGACTTGGA",6,2.69,NA,NA,NA,NA,NA,NA,"stop","R27* D97Y P149G",3
"lib2","SARS-CoV-2","GAGAACTGAACGAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","C102L Y119* I138T V182P",4
"lib2","SARS-CoV-2","GAGAACTGAAGTTATA",4,10.15,NA,NA,NA,NA,NA,NA,"stop","T15S C49D S69* D97L V115N E141V",6
"lib2","SARS-CoV-2","GAGAACTGAGAAAAAT",6,52.27,8.13,-2.71,0.19,1.5,1.07,0.01,"1 nonsynonymous","R127E",1
"lib2","SARS-CoV-2","GAGAACTGCAAATACC",12,298.27,9.8,-1.03,0.06,2.53,1.04,0,">1 nonsynonymous","C6V A22K P149S",3
"lib2","SARS-CoV-2","GAGAACTTAAACATTC",2,6.68,10.04,-0.79,0.16,2.89,1,0.01,">1 nonsynonymous","L60F N107A",2
"lib2","SARS-CoV-2","GAGAACTTCATGTTCG",2,8.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T85M D90G F99L A105P V181M",5
"lib2","SARS-CoV-2","GAGAACTTCTGATGTG",1,32.71,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T55M D90L F167L",3
"lib2","SARS-CoV-2","GAGAACTTGCATAACG",14,233.4,9.55,-1.29,0.04,1.98,1.06,0,">1 nonsynonymous","L5P G83S P96D G196C",4
"lib2","SARS-CoV-2","GAGAAGAAAATTCTCC",16,269.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D34A T100D K114V Y175S",4
"lib2","SARS-CoV-2","GAGAAGAAAGATAGAC",5,24.94,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A22T T55I A81T R127L",4
"lib2","SARS-CoV-2","GAGAAGAAATCTCGAG",1,69.28,6,-4.84,2,3,1.21,0,">1 nonsynonymous","G9T A18T S41R G74Y D90M Y178N",6
"lib2","SARS-CoV-2","GAGAAGAAGAGGATCC",13,98.77,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L5W W23E P96T W106R N120M L183M",6
"lib2","SARS-CoV-2","GAGAAGACAGACAAAG",16,219.48,9.84,-1,0.02,2.87,1.09,0,">1 nonsynonymous","D97P G116S E154I",3
"lib2","SARS-CoV-2","GAGAAGACGCTGATTA",3,52.07,6.49,-4.34,0.35,1.5,1.19,0.01,">1 nonsynonymous","R27V Y178G",2
"lib2","SARS-CoV-2","GAGAAGAGCACATTTA",10,109.27,6.19,-4.65,0.79,1.5,1.29,0.02,">1 nonsynonymous","E10H P96L",2
"lib2","SARS-CoV-2","GAGAAGAGTCACGCGG",7,152.61,9.88,-0.95,0.07,2.24,1.04,0,">1 nonsynonymous","G9T K94S",2
"lib2","SARS-CoV-2","GAGAAGATTACGGCCC",6,35.42,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9L K56P A81Y",3
"lib2","SARS-CoV-2","GAGAAGCAAATCCAAA",3,5.28,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","V20M D90T I104L S200G",4
"lib2","SARS-CoV-2","GAGAAGCATGCAACAA",2,23.48,10.66,-0.18,0.09,2.94,1.02,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","GAGAAGCCACGTAGTT",4,48.99,10.62,-0.22,0.04,3,1.02,0,">1 nonsynonymous","K87T D98N A190G",3
"lib2","SARS-CoV-2","GAGAAGCCCGCGACCG",6,40.16,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D59F G101R Y119S",3
"lib2","SARS-CoV-2","GAGAAGCCTTACCCCA",5,108.85,10.77,-0.07,0.05,2.94,1.05,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","GAGAAGCGCGAATATA",4,19.26,7.81,-3.03,0.29,1.86,1.1,0.06,">1 nonsynonymous","C6M F47I G155N",3
"lib2","SARS-CoV-2","GAGAAGCGGCCATGCT",1,13.59,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","W106K F167N",2
"lib2","SARS-CoV-2","GAGAAGCTAAGATAGC",11,28.46,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15E G83C C102D F126T G146A C158V",6
"lib2","SARS-CoV-2","GAGAAGCTTGAGCCGT",1,8.58,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L95S R127N T140I P149L G155R P161H",6
"lib2","SARS-CoV-2","GAGAAGGAAGATGGCT",4,44.01,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N40F F62S V71K Y93W D137S C158L",6
"lib2","SARS-CoV-2","GAGAAGGAGTTCATAG",3,1.29,NA,NA,NA,NA,NA,NA,"stop","V20M K94* P177R",3
"lib2","SARS-CoV-2","GAGAAGGCACTCATCG",4,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V I104S S139Y",3
"lib2","SARS-CoV-2","GAGAAGGCATTCTCAA",3,95.39,9.54,-1.29,0.04,2.94,1.1,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","GAGAAGGCCGGTGGTA",5,61.25,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","E10D K56V F167N",3
"lib2","SARS-CoV-2","GAGAAGGGACAAGTAT",4,29.86,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","A18V S41C A89C K128E V153I L162W",6
"lib2","SARS-CoV-2","GAGAAGGGATGGTAAG",5,68.75,9.52,-1.32,0.12,1.58,1.07,0.01,">1 nonsynonymous","W106T E141C",2
"lib2","SARS-CoV-2","GAGAAGGGGACACTTA",13,156.22,10.63,-0.2,0.03,2.94,1.06,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","GAGAAGGTAGACACAA",7,86.47,6.64,-4.2,0.33,1.5,1.17,0.01,">1 nonsynonymous","S43K G83S Y123C Y165M",4
"lib2","SARS-CoV-2","GAGAAGGTCTGGTTAA",3,8.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5N C31Q W106I G155H",4
"lib2","SARS-CoV-2","GAGAAGTATGCACACG",2,10.23,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15A A81S C102I K128R Q176G",5
"lib2","SARS-CoV-2","GAGAAGTGTATAATCA",3,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83C Q163W",2
"lib2","SARS-CoV-2","GAGAAGTTCGATATAA",6,103.07,9.58,-1.25,0.04,2.86,1.07,0,">1 nonsynonymous","R27T T170P",2
"lib2","SARS-CoV-2","GAGAAGTTGTCTGCCA",6,136.63,6,-4.84,1.6,1.5,1.18,0.01,">1 nonsynonymous","K87R D98S I142M G155T V181E",5
"lib2","SARS-CoV-2","GAGAATAAAAAAATCA",4,25.35,7.85,-2.98,0.11,1.94,1.07,0,">1 nonsynonymous","C6L S53Y T85V E154D P197R",5
"lib2","SARS-CoV-2","GAGAATAAAAAGCCGC",12,224.42,10.73,-0.11,0.04,2.94,1.06,0,">1 nonsynonymous","F8L K48L",2
"lib2","SARS-CoV-2","GAGAATAACATTATCG",4,7.57,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V11M V65S G83Y Y93Q E141V F160L",6
"lib2","SARS-CoV-2","GAGAATAACCAACAGC",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C Y66N R124S",3
"lib2","SARS-CoV-2","GAGAATAAGTACACAC",17,51.2,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V182P T201I",2
"lib2","SARS-CoV-2","GAGAATAAGTTAAGTA",1,10.71,9.87,-0.97,0.3,1.89,1.12,0.03,">1 nonsynonymous","N40I C61G T85R Q144E",4
"lib2","SARS-CoV-2","GAGAATAATAGAGATT",3,3.15,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib2","SARS-CoV-2","GAGAATAGCAAAATTG",2,34.4,8.58,-2.26,0.11,2.48,1.08,0,">1 nonsynonymous","Y66M G146C Q168R",3
"lib2","SARS-CoV-2","GAGAATAGCACCCATG",12,87.67,7.55,-3.28,0.2,1.5,1.09,0.01,">1 nonsynonymous","G83Q G155M T170P K198F",4
"lib2","SARS-CoV-2","GAGAATAGGGCGTAAA",2,11.9,10.26,-0.58,0.15,2.84,1.09,0.01,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","GAGAATAGGTAACGTT",3,96.23,10.33,-0.51,0.04,2.98,1.02,0,">1 nonsynonymous","F44T K114H",2
"lib2","SARS-CoV-2","GAGAATAGTATAATAG",3,25.7,9.08,-1.76,0.07,2.87,1.11,0,">1 nonsynonymous","G166K A192E",2
"lib2","SARS-CoV-2","GAGAATATCCGTACGT",2,67.9,10.25,-0.59,0.05,2.94,1.06,0,">1 nonsynonymous","G83R D98E F160V",3
"lib2","SARS-CoV-2","GAGAATATCTATTGAA",2,8.9,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","V11Y A18H G83R Q144W V181W",5
"lib2","SARS-CoV-2","GAGAATATGAGATATA",9,78.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N24W F62Y A81D I88F C102K L111Y G152V",7
"lib2","SARS-CoV-2","GAGAATATTAAAAATG",3,27.05,10.5,-0.34,0.08,2.96,1.03,0,">1 nonsynonymous","N64I T140L",2
"lib2","SARS-CoV-2","GAGAATATTCTACATA",2,1.46,NA,NA,NA,NA,NA,NA,"stop","L57K T100* G166E",3
"lib2","SARS-CoV-2","GAGAATATTTTTTTAA",4,2.47,NA,NA,NA,NA,NA,NA,"stop","L60N V103N D137L T148* G196C T201I",6
"lib2","SARS-CoV-2","GAGAATCAAAATTTAA",3,29.38,10.86,0.03,0.06,2.84,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGAATCACCTACTGT",1,1.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7N",1
"lib2","SARS-CoV-2","GAGAATCATAAAAACT",11,3.68,NA,NA,NA,NA,NA,NA,"stop","I2P F47A K87R G174*",4
"lib2","SARS-CoV-2","GAGAATCCAATCCAAG",2,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52Y N107I",2
"lib2","SARS-CoV-2","GAGAATCCATAAATTA",1,5.28,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","E10N C49S",2
"lib2","SARS-CoV-2","GAGAATCCCTTTAGAC",5,33.37,6.61,-4.22,0.24,1.5,1.08,0.01,">1 nonsynonymous","I2L N107K S139R G155H",4
"lib2","SARS-CoV-2","GAGAATCCTATATGTA",8,41.5,9.38,-1.46,0.1,2.01,1.05,0,">1 nonsynonymous","N4T F17L A42C",3
"lib2","SARS-CoV-2","GAGAATCGATATAAGA",1,14.47,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","K87Y Y93R T148I G172V",4
"lib2","SARS-CoV-2","GAGAATCGCACCAAAA",11,159.84,10.36,-0.48,0.04,2.87,1.06,0,">1 nonsynonymous","V37L F62D",2
"lib2","SARS-CoV-2","GAGAATCTAAAATTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","S36A S69N D98F K198*",4
"lib2","SARS-CoV-2","GAGAATCTATCGAACA",3,80.27,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S36M K56Q D98L I142M C150V G155V G172E C195G",8
"lib2","SARS-CoV-2","GAGAATCTGGATACAG",2,37.52,10.26,-0.58,0.09,2.65,1.07,0.01,">1 nonsynonymous","L5R Q84L K128V S164A T201N",5
"lib2","SARS-CoV-2","GAGAATCTGGGCACGG",10,103.26,6.75,-4.08,0.35,1.5,1.14,0.01,">1 nonsynonymous","R25G K87S S200P",3
"lib2","SARS-CoV-2","GAGAATCTTTACATTG",2,13.31,6.25,-4.59,1.66,1.5,1.09,0.01,">1 nonsynonymous","I2N N109S Y143R",3
"lib2","SARS-CoV-2","GAGAATGCCCATAGTG",1,19.11,6.01,-4.83,0.69,3,1.34,0.01,">1 nonsynonymous","C6I V37F L60I K128A A145L",5
"lib2","SARS-CoV-2","GAGAATGCGGCTATCA",1,4.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11R",1
"lib2","SARS-CoV-2","GAGAATGGCATCAATT",5,103.28,9.95,-0.89,0.07,2.4,1.04,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","GAGAATGGTAATGCAC",5,61.94,8.01,-2.82,0.15,1.61,1.12,0.01,">1 nonsynonymous","Y91L S113V Y119R",3
"lib2","SARS-CoV-2","GAGAATGTCCAACAAG",4,33.19,6,-4.84,2,2.31,1.13,0.03,">1 nonsynonymous","F8T Y21L R127Y",3
"lib2","SARS-CoV-2","GAGAATTAATAAATCA",2,9.09,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","W23V Y35I P96L L125G",4
"lib2","SARS-CoV-2","GAGAATTACGTTAACC",3,32.3,6.12,-4.71,0.85,1.5,1.13,0.02,">1 nonsynonymous","P7Y T55C P82T C195N",4
"lib2","SARS-CoV-2","GAGAATTACTGAGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P T55S K94Y K114T",4
"lib2","SARS-CoV-2","GAGAATTACTTATCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10R L122* T140Y T148V F156R S200*",6
"lib2","SARS-CoV-2","GAGAATTATACCTGTG",5,91.18,10.87,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAATTCAGGGTATC",6,119.47,10.63,-0.21,0.03,2.93,1.09,0,">1 nonsynonymous","R78P V153S L188Y",3
"lib2","SARS-CoV-2","GAGAATTCGAATGGGC",19,463.5,10.2,-0.64,0.03,2.78,1.05,0,">1 nonsynonymous","K94R Q144H",2
"lib2","SARS-CoV-2","GAGAATTCTACGATTA",6,86.75,10.57,-0.27,0.03,2.89,1.06,0,">1 nonsynonymous","Y39N T46I",2
"lib2","SARS-CoV-2","GAGAATTCTCGCAATG",4,44.35,10.8,-0.04,0.05,2.95,1.04,0,">1 nonsynonymous","S43H Q144R",2
"lib2","SARS-CoV-2","GAGAATTCTTTCTACT",3,24.43,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K87S L95K",2
"lib2","SARS-CoV-2","GAGAATTGAATGCCCT",4,56,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N4C T15L F156Y F160P Y178S",5
"lib2","SARS-CoV-2","GAGAATTGATTAACTC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","P7Q Y35* T85S F134V F156Y",5
"lib2","SARS-CoV-2","GAGAATTTGAACTTAT",14,142.15,10.2,-0.63,0.05,2.78,1.01,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","GAGACAAACTTATTTT",5,19.3,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","F8L G86V L95S K132C T148L Q168P",6
"lib2","SARS-CoV-2","GAGACAAATAATCTAC",8,239.56,9.88,-0.96,0.04,2.95,1.02,0,">1 nonsynonymous","V37C K87W Y175F",3
"lib2","SARS-CoV-2","GAGACAACATGCCGAC",6,0.49,NA,NA,NA,NA,NA,NA,"stop","R16W S41* R73E N120Q",4
"lib2","SARS-CoV-2","GAGACAACCGATTATA",3,32.25,6.18,-4.66,0.66,1.5,1.16,0.01,">1 nonsynonymous","R25I G152A",2
"lib2","SARS-CoV-2","GAGACAAGACCGCGCG",7,44.27,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","P7E R16M F99P I138V",4
"lib2","SARS-CoV-2","GAGACAAGCCAGGTCA",8,77.18,6,-4.84,2,3,1.22,0,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","GAGACAAGTAGCTTAC",1,16.39,10.8,-0.04,0.1,2.86,1.04,0,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","GAGACAATAATATATC",6,49.84,9.98,-0.86,0.06,2.84,1.07,0,">1 nonsynonymous","L5H L111A Y143I N171Y",4
"lib2","SARS-CoV-2","GAGACAATATACAGTG",5,63.68,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8N S19R W106L P149T",4
"lib2","SARS-CoV-2","GAGACAATATTCATGA",4,61.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96I F160P",2
"lib2","SARS-CoV-2","GAGACAATTCTTCCCT",9,0.51,NA,NA,NA,NA,NA,NA,"stop","K94N G117C G155M L162*",4
"lib2","SARS-CoV-2","GAGACACACCATTTCT",3,89.28,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T85M L95T Q176L",3
"lib2","SARS-CoV-2","GAGACACAGTAAGAAA",9,148.16,8.53,-2.31,0.09,2.82,1.04,0,">1 nonsynonymous","L60M Y66I P149H N157M",4
"lib2","SARS-CoV-2","GAGACACCCTAAAAAA",2,120.74,10.27,-0.57,0.05,2.77,1.09,0,">1 nonsynonymous","A18R K132G",2
"lib2","SARS-CoV-2","GAGACACCTTTTACCA",5,33.11,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I88D N130C G146L E186T",4
"lib2","SARS-CoV-2","GAGACACGAAATGACC",6,164.21,10.47,-0.37,0.03,2.88,1.1,0,">1 nonsynonymous","A42K Y66C V173C",3
"lib2","SARS-CoV-2","GAGACACGATTTAAAG",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L Y50C T100R C150F",4
"lib2","SARS-CoV-2","GAGACACGCAAAAGGT",1,0.7,NA,NA,NA,NA,NA,NA,"stop","A42I D112G I138*",3
"lib2","SARS-CoV-2","GAGACACTACAGACAA",1,49.56,10.17,-0.66,0.06,2.88,1,0,"1 nonsynonymous","Q79K",1
"lib2","SARS-CoV-2","GAGACACTCTCCAAGT",2,0.39,NA,NA,NA,NA,NA,NA,"stop","N40F Y91I C102*",3
"lib2","SARS-CoV-2","GAGACAGACGACCTGT",7,35.28,7.89,-2.94,0.25,1.5,1.17,0.03,">1 nonsynonymous","N1V V11I A18V G83I",4
"lib2","SARS-CoV-2","GAGACAGATATCCCGA",1,17.74,9.25,-1.58,0.21,1.78,1.05,0.02,">1 nonsynonymous","Y123L F185T",2
"lib2","SARS-CoV-2","GAGACAGCAACCATAT",2,100.94,10.11,-0.73,0.04,2.76,1.08,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","GAGACAGCGCATCCGT",7,118.72,10.7,-0.14,0.05,2.91,1.09,0,">1 nonsynonymous","K26T E141L",2
"lib2","SARS-CoV-2","GAGACAGGAAATCAAG",3,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81F I88N A105W",3
"lib2","SARS-CoV-2","GAGACAGGATAGTCCA",2,14.2,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","T3F R136V Y143S",3
"lib2","SARS-CoV-2","GAGACAGTAAATATAA",1,159.6,8.96,-1.88,0.06,2.84,1.1,0,">1 nonsynonymous","T3L N30S F167W P197I",4
"lib2","SARS-CoV-2","GAGACAGTAGGGAATT",1,133.71,10.87,0.04,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGACAGTCATAAAAG",2,28.05,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S108T G146I P169A L188V",4
"lib2","SARS-CoV-2","GAGACAGTGACACTAG",4,42.59,10.03,-0.8,0.11,2.16,1,0.01,"1 nonsynonymous","V20T",1
"lib2","SARS-CoV-2","GAGACAGTTGCCGAGC",7,109.17,9.08,-1.76,0.09,2.51,1.08,0,">1 nonsynonymous","G116H Y121S",2
"lib2","SARS-CoV-2","GAGACATATAATACAC",1,46.28,10.25,-0.59,0.03,3,1.01,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","GAGACATCTCGATACG",5,66.98,10.64,-0.2,0.04,2.93,1.07,0,">1 nonsynonymous","T55L T63L G196C",3
"lib2","SARS-CoV-2","GAGACATGAATGTTAA",2,1.38,NA,NA,NA,NA,NA,NA,"stop","G9Q Q84* D137R",3
"lib2","SARS-CoV-2","GAGACATGATAACTAC",7,65.27,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V71K G152V",2
"lib2","SARS-CoV-2","GAGACATGTTATGAAA",7,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V S41L T140R P191S",4
"lib2","SARS-CoV-2","GAGACATTTAAAGCGA",7,10.21,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6G V103N C158M F185Y",4
"lib2","SARS-CoV-2","GAGACATTTAGTATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1S V37*",2
"lib2","SARS-CoV-2","GAGACATTTGAACACC",9,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167Q",1
"lib2","SARS-CoV-2","GAGACCAACGAGCCAG",2,26.72,10.36,-0.47,0.05,2.97,1,0,"1 nonsynonymous","S108C",1
"lib2","SARS-CoV-2","GAGACCAAGAGCTAAA",2,22.24,7.53,-3.31,0.29,1.5,1.15,0.03,">1 nonsynonymous","A33P N58Q C102S",3
"lib2","SARS-CoV-2","GAGACCAATCATCTTG",4,16.91,10.95,0.11,0.09,3,1,0,"1 nonsynonymous","N130I",1
"lib2","SARS-CoV-2","GAGACCACTAAGTGTA",1,11.26,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N92L N110R P191R",3
"lib2","SARS-CoV-2","GAGACCAGACAGACGC",4,40.07,6.01,-4.83,1.22,1.5,1.15,0.02,">1 nonsynonymous","A67I I80E F167R",3
"lib2","SARS-CoV-2","GAGACCAGCAGTGCAA",1,57.74,10.71,-0.13,0.04,3,1,0,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","GAGACCAGCCAGTATA",7,72.28,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A33K Y39A K87A G152N F167R C195S",6
"lib2","SARS-CoV-2","GAGACCATACGTTTCT",1,91.97,10.12,-0.72,0.05,2.96,1.04,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","GAGACCATATATACCA",11,175.8,9.09,-1.74,0.08,2.04,1.1,0,">1 nonsynonymous","G9E Y121R N151L",3
"lib2","SARS-CoV-2","GAGACCATCATCCCTT",5,86.65,10.49,-0.34,0.04,2.88,1.06,0,"1 nonsynonymous","N13T",1
"lib2","SARS-CoV-2","GAGACCATTAGTATGC",3,36.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82K E154V Y159C",3
"lib2","SARS-CoV-2","GAGACCATTTAATATT",1,63.2,10.9,0.07,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGACCCAAGTTTACC",2,11.09,6.64,-4.2,0.4,3,1.13,0.03,">1 nonsynonymous","T3P L60S S69I C150L L183M",5
"lib2","SARS-CoV-2","GAGACCCACAGACAGT",1,46.54,10.02,-0.82,0.08,2.74,1.1,0,">1 nonsynonymous","N1G D90K K114S N120R I138A P197A",6
"lib2","SARS-CoV-2","GAGACCCATCACGTAA",3,44.4,9.72,-1.12,0.12,1.92,1.07,0.01,">1 nonsynonymous","R16A C49V T100C",3
"lib2","SARS-CoV-2","GAGACCCCATGCCGAG",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K N13F",2
"lib2","SARS-CoV-2","GAGACCCTTAAGGCCG",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83M V173G",2
"lib2","SARS-CoV-2","GAGACCGAACGAAGGT",5,28.38,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","W23D F167N",2
"lib2","SARS-CoV-2","GAGACCGAAGATCCTT",4,1.04,NA,NA,NA,NA,NA,NA,"stop","G51F G116* G152W R179E",4
"lib2","SARS-CoV-2","GAGACCGATAACAAAT",4,66.58,10.61,-0.22,0.04,2.92,1.03,0,">1 nonsynonymous","N120F S129G",2
"lib2","SARS-CoV-2","GAGACCGTAATATGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D34G F62Y G86A Y119* C150K",5
"lib2","SARS-CoV-2","GAGACCGTACCTAGAA",1,14.8,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","G51C T100W V181L",3
"lib2","SARS-CoV-2","GAGACCTAGTAATCTT",1,16.37,10.72,-0.11,0.06,2.91,1.12,0,">1 nonsynonymous","T55R A190F",2
"lib2","SARS-CoV-2","GAGACCTCAATTATAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","F44* D59I N64D S113P N120Y P133H",6
"lib2","SARS-CoV-2","GAGACCTCAATTCTTA",1,5.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y35M D90Y I104R",3
"lib2","SARS-CoV-2","GAGACCTCATATATGT",6,18,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","G9T C102R G117V I138A E154N",5
"lib2","SARS-CoV-2","GAGACCTGAGCTCAAC",3,73.15,10.86,0.02,0.11,2.74,1.14,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","GAGACCTTTTTAGCCC",3,23.5,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","Y93T L122T K128L",3
"lib2","SARS-CoV-2","GAGACGAAATAAAGTC",3,13.83,6.46,-4.38,0.57,1.5,1.17,0.03,">1 nonsynonymous","T100S Y123D T140N",3
"lib2","SARS-CoV-2","GAGACGAACAAACTTT",3,25.67,8.42,-2.42,0.14,2.85,1.15,0.01,">1 nonsynonymous","F62A Y175C",2
"lib2","SARS-CoV-2","GAGACGAACTAACGCG",6,28.08,9.48,-1.36,0.1,1.83,1.11,0.01,"1 nonsynonymous","F185R",1
"lib2","SARS-CoV-2","GAGACGAACTTGAAAT",1,20,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I28T S45Y W106M",3
"lib2","SARS-CoV-2","GAGACGAACTTTATAC",14,134.94,9.78,-1.06,0.09,1.87,1.05,0,">1 nonsynonymous","E135I E141L",2
"lib2","SARS-CoV-2","GAGACGAATGTATGAC",5,26.74,6.07,-4.77,0.92,1.5,1.17,0.01,">1 nonsynonymous","F8E I80K Q84Y D97G R127P R136V Q144K F156V",8
"lib2","SARS-CoV-2","GAGACGACCACAGAGG",16,180.68,9.23,-1.6,0.05,2.36,1.07,0,">1 nonsynonymous","T15R N64V Y121S T201K",4
"lib2","SARS-CoV-2","GAGACGACTTTAATGG",2,32.27,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","Y39G D75W K114P P161K",4
"lib2","SARS-CoV-2","GAGACGAGACTTCGTA",7,144.2,9.64,-1.19,0.04,2.92,1.08,0,"1 nonsynonymous","S113T",1
"lib2","SARS-CoV-2","GAGACGAGGAATGAAG",1,1.18,NA,NA,NA,NA,NA,NA,"stop","I88* A105C",2
"lib2","SARS-CoV-2","GAGACGAGTGCATACT",2,84.73,9.71,-1.13,0.11,2.05,1.05,0,">1 nonsynonymous","A33S A105C K199T",3
"lib2","SARS-CoV-2","GAGACGATACTGCATC",13,86.63,7.81,-3.02,0.42,1.5,1.1,0.06,">1 nonsynonymous","C6I F12G N24F F62W T201R",5
"lib2","SARS-CoV-2","GAGACGATTAATCCGA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","S43K K56* K87T G196S",4
"lib2","SARS-CoV-2","GAGACGCAGTATCAAG",5,31.44,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y39V D98I V103A S129F I138N",5
"lib2","SARS-CoV-2","GAGACGCATAAGTTAT",1,40.63,10.78,-0.05,0.05,3,1.01,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","GAGACGCCAGAAACGG",2,34.52,9.42,-1.42,0.06,1.91,1.03,0,">1 nonsynonymous","C49L N120R K199N",3
"lib2","SARS-CoV-2","GAGACGCCCCGTGTGC",5,41.57,6.19,-4.65,0.88,1.5,1.18,0.03,">1 nonsynonymous","I2H C49I V71E A89Q E141P V173F",6
"lib2","SARS-CoV-2","GAGACGCCTCTATTTT",6,191.55,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","K56D P177L",2
"lib2","SARS-CoV-2","GAGACGCTGTAAAAAC",2,17.02,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I28M L125R N157C",3
"lib2","SARS-CoV-2","GAGACGCTTTAGTGTT",8,46.19,6.49,-4.35,0.51,1.5,1.15,0.03,">1 nonsynonymous","D68A P149T",2
"lib2","SARS-CoV-2","GAGACGGTATCTTCCA",3,24.57,10.83,-0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGACGGTCAAACACT",3,41.65,10.83,0,0.09,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGACGGTGGTGAGAG",4,22.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51A G86V C150R",3
"lib2","SARS-CoV-2","GAGACGTTCTAAGTAT",4,52.59,6,-4.84,2,3,1.12,0,"1 nonsynonymous","P161L",1
"lib2","SARS-CoV-2","GAGACGTTGAAAAATT",1,5.5,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","S41K T55I G116R Y159D",4
"lib2","SARS-CoV-2","GAGACGTTGATTTACG",11,101,10.65,-0.18,0.02,2.98,1.03,0,">1 nonsynonymous","L122H G155T",2
"lib2","SARS-CoV-2","GAGACTAAAAATAATA",2,36.32,8.07,-2.77,0.18,1.91,1.13,0.01,">1 nonsynonymous","N64P P96K Q163R T170A",4
"lib2","SARS-CoV-2","GAGACTAAAATGACAC",5,22.78,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N1S A33R D137L",3
"lib2","SARS-CoV-2","GAGACTAACCTAGACT",4,33.54,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F8S Y91L Y123C",3
"lib2","SARS-CoV-2","GAGACTAACCTCAAGC",5,119.67,10.81,-0.03,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGACTAACTAATGAA",3,17.53,9.97,-0.87,0.1,1.99,1.03,0,">1 nonsynonymous","V37M F62K D98V",3
"lib2","SARS-CoV-2","GAGACTACATATAACA",1,10.48,9.35,-1.49,0.24,1.97,1.09,0.04,">1 nonsynonymous","F8S L187R",2
"lib2","SARS-CoV-2","GAGACTACGAAAAATG",13,280.93,10.8,-0.04,0.03,2.95,1.06,0,"1 nonsynonymous","K114W",1
"lib2","SARS-CoV-2","GAGACTACTTTACGTA",16,227.81,10.68,-0.16,0.03,2.89,1.08,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","GAGACTAGATCACTTA",7,83.3,10.73,-0.11,0.05,2.92,1.07,0,"1 nonsynonymous","T15D",1
"lib2","SARS-CoV-2","GAGACTAGATTAGAAA",4,1.96,NA,NA,NA,NA,NA,NA,"stop","R73F G117*",2
"lib2","SARS-CoV-2","GAGACTATATACAACA",9,47.51,9.21,-1.62,0.24,1.5,1.03,0.02,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","GAGACTATGGTTAAAG",2,28.67,10.06,-0.78,0.12,2.81,1,0.01,">1 nonsynonymous","V37L P54V F62V S69M",4
"lib2","SARS-CoV-2","GAGACTCCCCTTGAGC",1,73.99,8.45,-2.39,0.13,1.71,1.06,0.01,">1 nonsynonymous","N130W Q176K",2
"lib2","SARS-CoV-2","GAGACTCCTGTGACAA",6,27.28,7.28,-3.55,0.35,1.5,1.1,0.04,">1 nonsynonymous","W106T G116H F134L",3
"lib2","SARS-CoV-2","GAGACTCGCTGAAAGG",2,11.48,10.91,0.07,0.07,2.98,1.09,0,"1 nonsynonymous","T55M",1
"lib2","SARS-CoV-2","GAGACTGACATGTTTA",5,28.35,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49K E141S",2
"lib2","SARS-CoV-2","GAGACTGCAACAGAAG",5,68.02,7.11,-3.72,0.27,1.5,1.1,0.02,">1 nonsynonymous","F12T T46L F126C F160W T201R",5
"lib2","SARS-CoV-2","GAGACTGCTAAAAACC",1,10.93,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","L60N G83N Y159S",3
"lib2","SARS-CoV-2","GAGACTGGCCGTACAA",1,9.69,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T3A G9F L57V A89S D98N I142S G166I",7
"lib2","SARS-CoV-2","GAGACTGTCATCGAAG",7,150.12,9.77,-1.06,0.03,2.65,1.03,0,">1 nonsynonymous","F62R Q84R G174A",3
"lib2","SARS-CoV-2","GAGACTTACGCCGGGC",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N S19L A33Y Y119A N130T",5
"lib2","SARS-CoV-2","GAGACTTCCAATACGA",1,4.39,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAGACTTCTCGCTTAA",8,0.97,NA,NA,NA,NA,NA,NA,"stop","V37P T148* K199V",3
"lib2","SARS-CoV-2","GAGACTTGGGCATATA",6,159.74,6,-4.84,0.96,1.5,1.19,0.01,">1 nonsynonymous","L60T G117V V173S",3
"lib2","SARS-CoV-2","GAGACTTTACCAGTTC",6,48.3,9.76,-1.08,0.1,2.61,1.05,0,">1 nonsynonymous","L60R N107R",2
"lib2","SARS-CoV-2","GAGACTTTTTTGTTCT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","L5W R25A S41L D68M P133*",5
"lib2","SARS-CoV-2","GAGAGAAAAAATTTTA",1,0.41,NA,NA,NA,NA,NA,NA,"stop","Y50C E76* T100G",3
"lib2","SARS-CoV-2","GAGAGAAAACCACGCC",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N C102M G166I L183Y",4
"lib2","SARS-CoV-2","GAGAGAAAGACGCATT",1,4.41,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAGAGAAATAGCCGAA",1,23.63,6.27,-4.57,0.68,1.5,1.07,0.04,">1 nonsynonymous","N58I V103Q R127E",3
"lib2","SARS-CoV-2","GAGAGAAATATTAGGT",1,20.2,9.78,-1.06,0.13,1.86,1.04,0.01,">1 nonsynonymous","F12G R27K V37Y",3
"lib2","SARS-CoV-2","GAGAGAACGCTCTCCC",9,123.71,8.78,-2.05,0.06,2.14,1.07,0,">1 nonsynonymous","D98I I142N",2
"lib2","SARS-CoV-2","GAGAGAAGAACTTAAA",5,107.2,10.2,-0.63,0.09,2.68,1.06,0,">1 nonsynonymous","A22T S36V V77L",3
"lib2","SARS-CoV-2","GAGAGAAGCGAAGCCT",1,12.05,10.75,-0.08,0.08,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAGAATATACCTAT",4,28.48,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","G9K N40E Y91I I104G",4
"lib2","SARS-CoV-2","GAGAGAATGAGAAATG",1,20.95,10.78,-0.05,0.07,2.82,1.2,0,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","GAGAGACAAACAAGTT",8,90.64,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Q84W C102R L122S F167S",4
"lib2","SARS-CoV-2","GAGAGACAAATGATAA",1,10.88,10.41,-0.43,0.1,2.63,1.03,0.01,"1 nonsynonymous","P133D",1
"lib2","SARS-CoV-2","GAGAGACAATCAATAC",8,4.09,NA,NA,NA,NA,NA,NA,"stop","D97* N107S S129L G166M",4
"lib2","SARS-CoV-2","GAGAGACAGACTTACA",3,18.62,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","Y50F V65P D97W P133C E141I",5
"lib2","SARS-CoV-2","GAGAGACATGTTAAAA",12,56.84,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N13V G51I I88M T100D G146K",5
"lib2","SARS-CoV-2","GAGAGACCACAGGGCT",9,115.78,10.84,0.01,0.04,2.93,1.09,0,"1 nonsynonymous","T55Q",1
"lib2","SARS-CoV-2","GAGAGAGAAGGATTAA",1,17.64,10.65,-0.19,0.08,2.91,1,0,"1 nonsynonymous","T63P",1
"lib2","SARS-CoV-2","GAGAGAGACAAAGACG",3,63.49,9.88,-0.95,0.07,2.83,1.09,0,">1 nonsynonymous","Y91F N118V",2
"lib2","SARS-CoV-2","GAGAGAGACACTCAAA",2,16.58,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","T63C D112W",2
"lib2","SARS-CoV-2","GAGAGAGCTTAACTAC",1,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q G86C P149C",3
"lib2","SARS-CoV-2","GAGAGAGGATGAGGGT",10,62.47,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2Y L60T Y91N D112M",4
"lib2","SARS-CoV-2","GAGAGAGTAACAATCT",8,99.51,9.21,-1.63,0.15,1.68,1.18,0.01,">1 nonsynonymous","Y91L W106V",2
"lib2","SARS-CoV-2","GAGAGAGTAAGTGATA",1,85.24,10.63,-0.21,0.04,2.94,1.06,0,"1 nonsynonymous","A33H",1
"lib2","SARS-CoV-2","GAGAGATAAACGCGAT",10,121.04,10.87,0.03,0.06,2.89,1.1,0,">1 nonsynonymous","Y35W C61Y T100L Q163K",4
"lib2","SARS-CoV-2","GAGAGATAACCGCGGC",3,1.4,NA,NA,NA,NA,NA,NA,"stop","Y35G N64D G83*",3
"lib2","SARS-CoV-2","GAGAGATAAGTTATTA",8,282.69,10.33,-0.5,0.03,2.92,1.05,0,">1 nonsynonymous","F8L G116H K132D K199F",4
"lib2","SARS-CoV-2","GAGAGATCGACACCTC",8,264.79,9.24,-1.6,0.05,2.84,1.08,0,">1 nonsynonymous","S147E Q176S",2
"lib2","SARS-CoV-2","GAGAGATCTGTCCTTA",9,243.11,8.95,-1.89,0.07,2.65,1.09,0,">1 nonsynonymous","A145N T201L",2
"lib2","SARS-CoV-2","GAGAGATGACACACAT",9,58.1,10.86,0.03,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGAGATTTCCTAAAC",6,32.19,6.11,-4.73,0.97,1.5,1.11,0.04,">1 nonsynonymous","N1G R27E D75G L95M S113Y N120P G172K",7
"lib2","SARS-CoV-2","GAGAGCAATGGTTCAC",2,21.72,10.29,-0.54,0.17,2.55,1.24,0.01,">1 nonsynonymous","T3R S43K F160M",3
"lib2","SARS-CoV-2","GAGAGCACCGTCTGTC",2,7.92,10.35,-0.49,0.11,2.75,1.25,0,">1 nonsynonymous","L38V T46S I138V",3
"lib2","SARS-CoV-2","GAGAGCACCGTTTTGG",1,14.41,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90R D137R P177L K199W",4
"lib2","SARS-CoV-2","GAGAGCACTAACGTAC",4,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R G86C P96K C150R G172I",5
"lib2","SARS-CoV-2","GAGAGCACTTACAAGG",7,180.06,7.47,-3.37,0.2,1.5,1.11,0.01,">1 nonsynonymous","A42Y Y175E",2
"lib2","SARS-CoV-2","GAGAGCATATGAGGTT",4,23.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3R S45I Y119K N157F",4
"lib2","SARS-CoV-2","GAGAGCATTAAGGAAA",5,101.04,10.89,0.06,0.06,2.92,1.07,0,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","GAGAGCCCTGTACACT",7,0.83,NA,NA,NA,NA,NA,NA,"stop","A14E V37G E76* G83E V103L V173G",6
"lib2","SARS-CoV-2","GAGAGCCGATAGCTAA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","L57F P96H T140* P169I",4
"lib2","SARS-CoV-2","GAGAGCCGCTCTAACT",5,57.09,9.83,-1,0.07,2.35,1.05,0,">1 nonsynonymous","G9V F44T E141V",3
"lib2","SARS-CoV-2","GAGAGCCTGTTAAGAA",4,52.61,10.08,-0.76,0.06,2.43,1.01,0,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","GAGAGCGAACCTTTAT",13,112.72,6.98,-3.85,0.21,1.5,1.12,0.01,">1 nonsynonymous","I2A R73P A81C T140A K199R",5
"lib2","SARS-CoV-2","GAGAGCGACAGTCTTC",2,10.53,6,-4.84,2,1.5,1.07,0.06,">1 nonsynonymous","C49S N120P",2
"lib2","SARS-CoV-2","GAGAGCGGGGCTTCCG",14,111.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19K D90E C150I",3
"lib2","SARS-CoV-2","GAGAGCGGGTTCTTGG",2,1.23,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","GAGAGCTAAGAACTAT",6,5.11,NA,NA,NA,NA,NA,NA,"stop","I88* F134W S164L",3
"lib2","SARS-CoV-2","GAGAGCTAGATGAAAC",1,6.25,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G51S P96A A105S R136G Y143N",5
"lib2","SARS-CoV-2","GAGAGCTATAAACGAA",2,0.84,NA,NA,NA,NA,NA,NA,"stop","P82G V103G S200*",3
"lib2","SARS-CoV-2","GAGAGCTCACTTTAGA",1,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52W I88A W106K T140K G152L F156Q F167T P177G S200T",9
"lib2","SARS-CoV-2","GAGAGCTCTTACCAAA",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L S200F",2
"lib2","SARS-CoV-2","GAGAGCTTCATATATT",6,1.27,NA,NA,NA,NA,NA,NA,"stop","I80Y D90R N157*",3
"lib2","SARS-CoV-2","GAGAGCTTCTAAGTGA",2,4.87,NA,NA,NA,NA,NA,NA,"stop","N64* K87N I104L",3
"lib2","SARS-CoV-2","GAGAGGAAAAGTAGTT",3,25.45,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V11N C31M F70S",3
"lib2","SARS-CoV-2","GAGAGGATACTTATCC",6,129.71,10.62,-0.22,0.05,2.9,1.01,0,">1 nonsynonymous","N40E A81G V153A",3
"lib2","SARS-CoV-2","GAGAGGATCAGAAGAT",16,5.28,NA,NA,NA,NA,NA,NA,"stop","S43H G51Y N120V C150*",4
"lib2","SARS-CoV-2","GAGAGGATGTAGACAC",12,4.1,NA,NA,NA,NA,NA,NA,"stop","N4C Y39* P82L G146M",4
"lib2","SARS-CoV-2","GAGAGGATGTTAATAG",4,20.66,8.27,-2.56,0.23,1.6,1.16,0.02,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","GAGAGGCAAGTCGAGG",9,295.06,10.85,0.02,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGAGGCACACCCGTT",7,73.25,9.01,-1.82,0.05,2.86,1.05,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","GAGAGGCATACATGAG",7,68.33,10.24,-0.59,0.03,2.89,1.06,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GAGAGGCATATTTGCG",7,56.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35D D97A R127T S200M",4
"lib2","SARS-CoV-2","GAGAGGCATGGGTGAC",1,43.27,10.88,0.04,0.06,2.94,1.06,0,"1 nonsynonymous","D97H",1
"lib2","SARS-CoV-2","GAGAGGCTAACCACTA",2,20.97,10.35,-0.49,0.09,2.81,1.03,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","GAGAGGCTTAGAAAGG",1,8.41,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","L57N G86E T100Y R124W Q168L",5
"lib2","SARS-CoV-2","GAGAGGGACGAAGAGT",4,40.13,10.46,-0.37,0.05,2.86,1.05,0,">1 nonsynonymous","N4Y A42I",2
"lib2","SARS-CoV-2","GAGAGGGGCACAGTCA",8,341.51,6.89,-3.95,0.13,1.52,1.11,0,"1 nonsynonymous","C150I",1
"lib2","SARS-CoV-2","GAGAGGGTAATCCAGG",2,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42T S69V G86Q R124A Q144G F167V",6
"lib2","SARS-CoV-2","GAGAGGGTCAATTTAG",6,68.6,10.85,0.02,0.05,2.94,1.06,0,"1 nonsynonymous","L188M",1
"lib2","SARS-CoV-2","GAGAGGGTCCTTCCCA",10,209.59,9.66,-1.18,0.03,2.93,1.06,0,">1 nonsynonymous","R16T S113C S129R",3
"lib2","SARS-CoV-2","GAGAGGTAACAGCACT",3,60.46,10.71,-0.12,0.05,2.94,1.09,0,"1 nonsynonymous","N58M",1
"lib2","SARS-CoV-2","GAGAGGTCGAATCCTG",7,66.61,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V77M Q84S D112L R136G P149V",5
"lib2","SARS-CoV-2","GAGAGTAAATGCAACA",3,35.87,10.73,-0.11,0.05,2.91,1.1,0,">1 nonsynonymous","A22Q T201E",2
"lib2","SARS-CoV-2","GAGAGTACCAAGGAAA",2,21.07,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","S29Q Y91D S113R T201K",4
"lib2","SARS-CoV-2","GAGAGTACCAATAATA",4,47.26,7.63,-3.21,0.37,1.5,1.04,0.05,">1 nonsynonymous","A33N F167H",2
"lib2","SARS-CoV-2","GAGAGTACTCTAATAA",8,34.81,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C49N L131R P161N",3
"lib2","SARS-CoV-2","GAGAGTAGAATGACTA",6,35.48,6,-4.84,1.82,3,1.17,0,">1 nonsynonymous","K56D V65W P82G S108L",4
"lib2","SARS-CoV-2","GAGAGTATAAAACAGT",2,62.99,10.21,-0.62,0.06,2.6,1.06,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","GAGAGTATGTAAAAAG",9,3.94,NA,NA,NA,NA,NA,NA,"stop","C61* G196A",2
"lib2","SARS-CoV-2","GAGAGTCACGGGAATT",6,59.94,9.56,-1.28,0.12,1.78,1.07,0.01,">1 nonsynonymous","L5T K94S V115A N151T",4
"lib2","SARS-CoV-2","GAGAGTGAGATTAGAG",5,59.85,10.77,-0.06,0.03,2.95,1.05,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","GAGAGTGATATCTACT",9,100.12,8.51,-2.33,0.18,1.5,1.04,0.01,"1 nonsynonymous","R127Y",1
"lib2","SARS-CoV-2","GAGAGTGGAAAGAGAT",4,21.77,8.22,-2.62,0.23,1.72,1.12,0.02,">1 nonsynonymous","C6L P133D",2
"lib2","SARS-CoV-2","GAGAGTTAAATTGGTA",7,89.41,10.63,-0.2,0.04,2.91,1.08,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","GAGAGTTATTTGGTGA",1,34.74,6.74,-4.1,0.23,1.5,1.07,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GAGAGTTGCGCATGGA",4,25.57,9.29,-1.54,0.19,1.93,1.06,0.02,">1 nonsynonymous","A22Q L60T D98V G174S",4
"lib2","SARS-CoV-2","GAGAGTTTCAAGGGCA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T100W G117* T170R",3
"lib2","SARS-CoV-2","GAGAGTTTTCAAATCC",7,86.22,9.65,-1.18,0.08,1.88,1.05,0,">1 nonsynonymous","Y91K D98W",2
"lib2","SARS-CoV-2","GAGATAAAAAGAAAGC",8,100.59,6.72,-4.11,0.31,1.5,1.11,0.02,">1 nonsynonymous","I2V K26G D34W C61G",4
"lib2","SARS-CoV-2","GAGATAAAAAGACGCA",1,44.65,10.53,-0.3,0.05,3,1.01,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","GAGATAAAACCTGGTT",2,42.78,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37R W106A N118S N130I R136S P177L",6
"lib2","SARS-CoV-2","GAGATAAAAGATAAAA",3,81.01,10.76,-0.07,0.07,2.94,1.07,0,">1 nonsynonymous","D59K T201V",2
"lib2","SARS-CoV-2","GAGATAAAATGGACAA",1,27.09,8.28,-2.55,0.12,2.2,1.07,0.01,">1 nonsynonymous","L5T T15I N118F H189S",4
"lib2","SARS-CoV-2","GAGATAAAGGAAAACA",1,39.69,10.83,-0.01,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATAAATGATGTTG",8,86.94,6,-4.84,2,3,1.24,0,">1 nonsynonymous","F44T D75A D98E S139V G146L",5
"lib2","SARS-CoV-2","GAGATAAATTTGCGAG",4,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F S113L N120Q I138F N151S",5
"lib2","SARS-CoV-2","GAGATAACAATGGTCT",5,28.76,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","T3L A89T T100N C150F",4
"lib2","SARS-CoV-2","GAGATAACACCCCGAA",2,13.04,6,-4.84,2,3,1.15,0,">1 nonsynonymous","P82Y K114R V181R",3
"lib2","SARS-CoV-2","GAGATAACCCAAGATA",12,230.79,10.7,-0.13,0.03,2.96,1.05,0,">1 nonsynonymous","V32D S129Q",2
"lib2","SARS-CoV-2","GAGATAACCGACAACC",1,46.11,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L5G E10R V103L G117S Q176S",5
"lib2","SARS-CoV-2","GAGATAACGAACGGGT",1,12.52,8.69,-2.14,0.12,2.93,1.1,0.01,">1 nonsynonymous","L5D L60V G166W Q176H",4
"lib2","SARS-CoV-2","GAGATAACTGAGAAGA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H K128V E141S",3
"lib2","SARS-CoV-2","GAGATAAGCCAATAAA",11,122.06,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N40P N64L V77N L95P A105S",5
"lib2","SARS-CoV-2","GAGATAAGGTTGGTGG",2,30.49,7.12,-3.71,0.3,1.5,1.14,0.01,">1 nonsynonymous","D112S F167L",2
"lib2","SARS-CoV-2","GAGATAATAACCCGGT",6,0,NA,NA,NA,NA,NA,NA,"stop","C6S N107*",2
"lib2","SARS-CoV-2","GAGATAATAACGCCCT",12,178.54,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S45I N107F",2
"lib2","SARS-CoV-2","GAGATAATAGTAAGTA",2,30.34,10.62,-0.22,0.14,2.79,1.02,0.01,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","GAGATACAATACACTG",5,84.05,10.87,0.04,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATACACCGCACAC",4,24.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T100P K199T",2
"lib2","SARS-CoV-2","GAGATACCCCCCAAAG",5,15.93,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1R C31T V71A G152A",4
"lib2","SARS-CoV-2","GAGATACCCCTCGTCG",4,87.18,9.99,-0.85,0.11,1.9,1.07,0,">1 nonsynonymous","I28E T201S",2
"lib2","SARS-CoV-2","GAGATACCGAGTACAA",12,8.31,NA,NA,NA,NA,NA,NA,"stop","T15* D90Y T100* W106Q Y121A E141K Q176M",7
"lib2","SARS-CoV-2","GAGATACGTACAACTA",1,5.12,10.98,0.14,0.09,2.92,1.06,0,">1 nonsynonymous","L5N T55S",2
"lib2","SARS-CoV-2","GAGATACGTCTTCATG",1,6.87,9.93,-0.91,0.25,2.36,1,0.02,">1 nonsynonymous","Q84W N120G V153S",3
"lib2","SARS-CoV-2","GAGATAGAAACCTGCA",7,165.57,10.27,-0.57,0.02,2.81,1.06,0,">1 nonsynonymous","Q84R P149G S184G",3
"lib2","SARS-CoV-2","GAGATAGACTAACCTC",2,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P S19L F99K F185K",4
"lib2","SARS-CoV-2","GAGATAGCGATTGAAT",13,1.7,NA,NA,NA,NA,NA,NA,"stop","V37* A105H K128D N171M L187Y",5
"lib2","SARS-CoV-2","GAGATAGCTAGACCTA",1,2.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","GAGATAGCTCCCAAAG",6,137.01,10.88,0.04,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATAGGCGGACACA",12,337.08,9.46,-1.38,0.06,2.35,1.06,0,">1 nonsynonymous","K87I V103M",2
"lib2","SARS-CoV-2","GAGATAGGGCAAATTG",1,25.04,6.34,-4.5,0.42,1.5,1.14,0.02,">1 nonsynonymous","S139N Y165P",2
"lib2","SARS-CoV-2","GAGATAGGTACCTAAA",1,9,9.81,-1.03,0.05,3,1.02,0,">1 nonsynonymous","Q168E K198D",2
"lib2","SARS-CoV-2","GAGATAGGTTTATATT",1,62.3,10.31,-0.52,0.03,2.88,1.11,0,">1 nonsynonymous","W106Q P197K",2
"lib2","SARS-CoV-2","GAGATAGTGCATGCTT",1,19.7,8.95,-1.88,0.23,2.09,1.06,0.02,">1 nonsynonymous","C6Y V173K Y178L",3
"lib2","SARS-CoV-2","GAGATAGTGTAAAATG",9,129.61,10.74,-0.09,0.02,2.96,1.04,0,">1 nonsynonymous","I2N V71I",2
"lib2","SARS-CoV-2","GAGATAGTGTATTTCG",2,48.03,7.22,-3.61,0.2,1.8,1.14,0.01,">1 nonsynonymous","K87I L122F S129L N171D",4
"lib2","SARS-CoV-2","GAGATATAACCTTAGC",5,96.73,10.34,-0.5,0.05,2.9,1.06,0,"1 nonsynonymous","R27G",1
"lib2","SARS-CoV-2","GAGATATATAGCCGTA",1,61.74,9.59,-1.24,0.05,2.85,1.06,0,"1 nonsynonymous","G74R",1
"lib2","SARS-CoV-2","GAGATATCATCTCTCG",6,103.86,10.58,-0.25,0.06,2.86,1.11,0,">1 nonsynonymous","A33T K114T",2
"lib2","SARS-CoV-2","GAGATATCCTATATGG",3,53.58,10.16,-0.67,0.06,2.77,1.06,0,">1 nonsynonymous","R78V Q84N I142M",3
"lib2","SARS-CoV-2","GAGATATCGGGCTCTG",13,25.97,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K26P D34V S139C C158N",4
"lib2","SARS-CoV-2","GAGATATGAATCACTT",4,13.42,8.17,-2.67,0.3,1.82,1.3,0.04,">1 nonsynonymous","G9S A14R L60M V65H T148A",5
"lib2","SARS-CoV-2","GAGATATGACTCCGTT",10,109.11,10.94,0.1,0.06,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATATGACTTAACA",6,103.86,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K48N F134D C150F Y165E",4
"lib2","SARS-CoV-2","GAGATATGCAGGGAAC",2,71.79,9.8,-1.04,0.08,2.36,1.12,0,">1 nonsynonymous","C6L G51R H189R",3
"lib2","SARS-CoV-2","GAGATATGTTCCATGC",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I V182A",2
"lib2","SARS-CoV-2","GAGATATTCTCTCCCC",10,67.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2F F12R P54M Y119S C158P G166F",6
"lib2","SARS-CoV-2","GAGATATTGAAGGGAC",5,102.85,10.7,-0.14,0.03,2.93,1.07,0,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","GAGATATTGGGATTAT",9,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S S29A W106F G152L",4
"lib2","SARS-CoV-2","GAGATCAAAAGAGAAG",2,28.68,9.95,-0.88,0.1,2.18,1.09,0,">1 nonsynonymous","E10V Y35N L122M P149N",4
"lib2","SARS-CoV-2","GAGATCACAACCTAGG",5,144.05,10.43,-0.41,0.04,2.92,1.04,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","GAGATCACAATATTGA",6,0.7,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib2","SARS-CoV-2","GAGATCACCAGGAACG",5,53.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D68K A105M D112C",3
"lib2","SARS-CoV-2","GAGATCACCAGTAATA",9,149.28,10.75,-0.09,0.05,2.91,1.1,0,"1 nonsynonymous","V173E",1
"lib2","SARS-CoV-2","GAGATCACCTTTTCCA",12,98.94,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N64V Y143C Y178P",3
"lib2","SARS-CoV-2","GAGATCAGAACGCACG",5,114.84,11.03,0.2,0.06,2.87,1.14,0,">1 nonsynonymous","I28L L122A",2
"lib2","SARS-CoV-2","GAGATCATAGCCAACG",4,64.49,10.79,-0.04,0.05,3,1.01,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","GAGATCATCATCTACC",2,43.47,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","I2R P82E K94S",3
"lib2","SARS-CoV-2","GAGATCATCCGATATC",3,8.53,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","T3N F99A",2
"lib2","SARS-CoV-2","GAGATCCGCATTTGCA",6,35.94,9.09,-1.74,0.22,1.5,1,0.03,">1 nonsynonymous","C61V G83N I104N",3
"lib2","SARS-CoV-2","GAGATCGAATAAAAAA",3,43.79,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F99S K132C F167N",3
"lib2","SARS-CoV-2","GAGATCGCATCTCAGG",1,11.49,10.77,-0.06,0.07,3,1,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GAGATCGTTTTGGTGT",2,2.55,NA,NA,NA,NA,NA,NA,"stop","D59T I88N W106L E141*",4
"lib2","SARS-CoV-2","GAGATCTAACATTTAT",1,26.52,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L5I D98K S113A L122P N157I",5
"lib2","SARS-CoV-2","GAGATCTACCCATGCT",8,103.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I72P N171R Y178V",3
"lib2","SARS-CoV-2","GAGATCTAGAGCGCTG",3,29.03,10.87,0.03,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATCTATCCCCACG",1,12.18,8.25,-2.58,0.12,1.84,1.01,0.01,">1 nonsynonymous","E10T D112E Y123R",3
"lib2","SARS-CoV-2","GAGATCTCACGTAATC",4,12.39,6.92,-3.92,0.41,1.5,1.13,0.04,"1 nonsynonymous","L131W",1
"lib2","SARS-CoV-2","GAGATCTGCCATAACT",3,1.17,NA,NA,NA,NA,NA,NA,"stop","F62H N120S E141*",3
"lib2","SARS-CoV-2","GAGATCTGCTACGGGC",3,65.46,10.22,-0.61,0.06,2.79,1.11,0,">1 nonsynonymous","V37F Y50S C61A",3
"lib2","SARS-CoV-2","GAGATCTTACCCATAA",4,58.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F T85V P149A Q176S",4
"lib2","SARS-CoV-2","GAGATCTTTTTATAAG",12,42.71,6,-4.84,0.7,1.5,1.15,0,">1 nonsynonymous","A81L T100S W106S S139A",4
"lib2","SARS-CoV-2","GAGATGAAATATTGGA",13,74.29,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","E76R C158G G174S",3
"lib2","SARS-CoV-2","GAGATGAAATGTAACC",2,0,NA,NA,NA,NA,NA,NA,"stop","T55H D97S N120* E154R",4
"lib2","SARS-CoV-2","GAGATGAATGATCATG",2,21.4,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","R16V R73M P133Y F167S",4
"lib2","SARS-CoV-2","GAGATGACAAAATAAT",2,44.03,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S36V N58I V71L K128L",4
"lib2","SARS-CoV-2","GAGATGACACATAATG",13,267.14,8.82,-2.02,0.06,1.96,1.13,0,">1 nonsynonymous","P177C S200L",2
"lib2","SARS-CoV-2","GAGATGACGCCGATAC",4,73.94,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","P54A D90V P149S Q176L",4
"lib2","SARS-CoV-2","GAGATGAGCAAACGAA",11,42.92,8.2,-2.64,0.2,1.5,1.08,0.02,">1 nonsynonymous","V20G V115K A190S",3
"lib2","SARS-CoV-2","GAGATGAGCGACCTTG",7,65.24,9.37,-1.46,0.09,1.71,1.1,0,">1 nonsynonymous","F47N Q144R",2
"lib2","SARS-CoV-2","GAGATGAGTCACAATT",2,45.05,10.76,-0.08,0.02,2.98,1.03,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","GAGATGATATAAGGAC",1,24.23,10.56,-0.28,0.05,3,1.01,0,">1 nonsynonymous","I2S P7K E141R",3
"lib2","SARS-CoV-2","GAGATGCCAGCCCCTA",6,26.5,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","D90P Q168I",2
"lib2","SARS-CoV-2","GAGATGCGGGGTCCGC",12,184.27,10.84,0,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATGGACGTAAATA",5,54.55,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","G9C I104S G172R",3
"lib2","SARS-CoV-2","GAGATGGCAAACAAGA",10,74.08,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F44L S53F K87P A105Q",4
"lib2","SARS-CoV-2","GAGATGGCACGGATAG",1,12.51,9.71,-1.12,0.07,1.97,1,0,">1 nonsynonymous","K56L P133L",2
"lib2","SARS-CoV-2","GAGATGGGACCACATC",2,10.71,10.29,-0.55,0.29,1.97,1.09,0.03,">1 nonsynonymous","G117K I142H",2
"lib2","SARS-CoV-2","GAGATGGTCAAAATGA",2,34.84,6.78,-4.06,0.27,1.69,1.12,0.01,">1 nonsynonymous","G9N T46R C158R T201W",4
"lib2","SARS-CoV-2","GAGATGGTTAGCGAGA",11,11.85,NA,NA,NA,NA,NA,NA,"stop","A18* N64L D98F",3
"lib2","SARS-CoV-2","GAGATGTACTTCATTT",12,1.33,NA,NA,NA,NA,NA,NA,"stop","F8* V77K P96N F99G N118C",5
"lib2","SARS-CoV-2","GAGATGTATGACAGAT",2,12.7,7.07,-3.77,0.55,1.5,1.11,0.03,">1 nonsynonymous","S45K L162K",2
"lib2","SARS-CoV-2","GAGATGTCAAAACACA",5,79.41,10.48,-0.35,0.05,2.91,1.08,0,">1 nonsynonymous","V37T D98I",2
"lib2","SARS-CoV-2","GAGATGTCAAGAAAAG",4,5.04,NA,NA,NA,NA,NA,NA,"stop","A14F L57* G83S S139G",4
"lib2","SARS-CoV-2","GAGATGTCACAGCTGA",9,24.18,6.55,-4.28,0.17,2.13,1.07,0,">1 nonsynonymous","I2F F8D W106K E141M",4
"lib2","SARS-CoV-2","GAGATGTCAGAAACAC",1,95.37,7.58,-3.25,0.18,1.5,1.09,0.01,">1 nonsynonymous","Y35E P177S",2
"lib2","SARS-CoV-2","GAGATGTCAGGAAAAC",1,45.48,10.27,-0.57,0.04,2.87,1.05,0,">1 nonsynonymous","L5M G152I",2
"lib2","SARS-CoV-2","GAGATGTCATAACTAA",1,47.87,10.76,-0.07,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATGTCCCAGTCTG",5,7.2,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","L60Q C102S",2
"lib2","SARS-CoV-2","GAGATGTGATACGGAT",3,48.59,10.84,0,0.06,2.93,1.1,0,"1 nonsynonymous","H189Q",1
"lib2","SARS-CoV-2","GAGATGTGATATACCA",15,64.96,9.31,-1.53,0.23,1.5,1.06,0.02,">1 nonsynonymous","N1A V103T S129L",3
"lib2","SARS-CoV-2","GAGATGTGATATTTTC",8,32.97,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","L5C V20L V173S",3
"lib2","SARS-CoV-2","GAGATGTGTAAAACCC",4,109.58,10.02,-0.81,0.05,2.91,1.04,0,"1 nonsynonymous","P177A",1
"lib2","SARS-CoV-2","GAGATGTGTTGTCAAC",1,46.94,10.09,-0.75,0.08,2.59,1,0,">1 nonsynonymous","G83C I104T",2
"lib2","SARS-CoV-2","GAGATGTTTATTATAT",1,50,10.26,-0.58,0.02,2.76,1.03,0,"1 nonsynonymous","Y93F",1
"lib2","SARS-CoV-2","GAGATTAAAAGAATAT",3,8.87,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F8R L131G",2
"lib2","SARS-CoV-2","GAGATTAAACAATTCG",1,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81M K132I P197L",3
"lib2","SARS-CoV-2","GAGATTAAAGGCTTTT",3,6.53,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F12H Y121C",2
"lib2","SARS-CoV-2","GAGATTAAGATAGCCC",20,30.6,9.99,-0.85,0.18,2.45,1.15,0.02,">1 nonsynonymous","Y35R N92Q V173D",3
"lib2","SARS-CoV-2","GAGATTAATATTTTCT",13,36.18,6,-4.84,2,3,1.37,0.04,">1 nonsynonymous","T15I F44G F167V Q176L V181G",5
"lib2","SARS-CoV-2","GAGATTACACTTAGAG",1,23.7,7.29,-3.54,0.28,1.5,1.1,0.02,">1 nonsynonymous","F44A Y50I E141N",3
"lib2","SARS-CoV-2","GAGATTACAGTGAAAA",4,87.82,10.83,0,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATTACCTTCGGAT",10,63.2,7.6,-3.23,0.26,1.5,1.16,0.02,">1 nonsynonymous","T100G N120F S129L",3
"lib2","SARS-CoV-2","GAGATTACGCACCACA",3,99.57,8.08,-2.75,0.19,1.5,1.05,0.01,">1 nonsynonymous","R16N L60T R78S G83M S113V N120M",6
"lib2","SARS-CoV-2","GAGATTACTCCATTAA",2,64.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A89R P96Q",2
"lib2","SARS-CoV-2","GAGATTAGACCATTAC",1,0.9,NA,NA,NA,NA,NA,NA,"stop","S36* P82Q D90S R124N P133L S200K",6
"lib2","SARS-CoV-2","GAGATTAGATTTTCTC",5,38.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S19Y F47R F62M R179G",4
"lib2","SARS-CoV-2","GAGATTAGTTCTAGGT",3,47.9,8.66,-2.17,0.12,2.76,1.11,0.01,">1 nonsynonymous","R16S D97L I142G S200L",4
"lib2","SARS-CoV-2","GAGATTATTAGATCCC",4,55.44,10.51,-0.32,0.05,2.92,1.08,0,">1 nonsynonymous","G51K K56N E141T",3
"lib2","SARS-CoV-2","GAGATTCAGATCACCC",2,0,NA,NA,NA,NA,NA,NA,"stop","A33T K56* D98L",3
"lib2","SARS-CoV-2","GAGATTCAGCAAAGCT",1,15.62,10.64,-0.19,0.06,2.93,1.1,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","GAGATTCGAACTTTGT",5,35.7,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F134C P177R",2
"lib2","SARS-CoV-2","GAGATTCTAACCGGTG",1,18.33,10.48,-0.36,0.13,2.77,1.05,0.01,">1 nonsynonymous","N1F N40E",2
"lib2","SARS-CoV-2","GAGATTCTTTATAAAC",9,212.92,9.82,-1.02,0.03,2.56,1.01,0,">1 nonsynonymous","S19E K56E",2
"lib2","SARS-CoV-2","GAGATTGAATGAGACG",10,305.26,10.22,-0.62,0.02,2.92,1.05,0,"1 nonsynonymous","C31A",1
"lib2","SARS-CoV-2","GAGATTGAGTATATTA",2,49,10.02,-0.82,0.08,2.81,1.08,0,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","GAGATTGATACAGATA",8,25.27,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R136Y C150I F156N",3
"lib2","SARS-CoV-2","GAGATTGATACCTACG",10,157.97,9.94,-0.89,0.05,2.41,1.07,0,">1 nonsynonymous","P7E K56N V77R",3
"lib2","SARS-CoV-2","GAGATTGCCAGTACAT",5,57.45,10.86,0.03,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATTGCCCATGAAG",3,20.45,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","G86R G116M P149E T201V",4
"lib2","SARS-CoV-2","GAGATTGCTTCACCAA",3,2.36,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAGATTGGCAAATCTG",5,102.67,10.78,-0.05,0.04,2.97,1.05,0,">1 nonsynonymous","A22R L111K",2
"lib2","SARS-CoV-2","GAGATTGGTGAATCAT",1,20.34,10.24,-0.59,0.1,2.75,1.04,0.01,">1 nonsynonymous","N64S D90V",2
"lib2","SARS-CoV-2","GAGATTGTAGAAAACG",2,0.67,NA,NA,NA,NA,NA,NA,"stop","R16* Y50P N58D T63I",4
"lib2","SARS-CoV-2","GAGATTTAAAAATAGA",10,80.41,7.46,-3.38,0.21,1.5,1.11,0.01,">1 nonsynonymous","C49L T55G C61Q K87D Q163R",5
"lib2","SARS-CoV-2","GAGATTTAAGTCACAA",6,31.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I28E Y35H D97S S164L",4
"lib2","SARS-CoV-2","GAGATTTACATAACAG",6,94.07,10.22,-0.62,0.03,2.88,1.02,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","GAGATTTAGTAAGATG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","S36* L95P D112K Y119W T140W Y175L",6
"lib2","SARS-CoV-2","GAGATTTCAAAAGCCG",2,59.01,10.85,0.02,0.08,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGATTTGTACGAGTT",9,147.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N40P Y91L F99V A105Y T148R",5
"lib2","SARS-CoV-2","GAGATTTGTCTCATAA",5,90.41,10.73,-0.1,0.04,2.95,1.05,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","GAGCAAAAGGACCTCA",2,56.56,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C61A G146D C150T",3
"lib2","SARS-CoV-2","GAGCAAAAGTAATTAA",2,50.66,10.94,0.1,0.07,2.96,1.07,0,">1 nonsynonymous","N24Q Q84T",2
"lib2","SARS-CoV-2","GAGCAAAATAGTGATT",4,0.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","GAGCAAAATGAGTTCG",3,12.33,10.66,-0.18,0.1,2.84,1.14,0,">1 nonsynonymous","T85L S147N",2
"lib2","SARS-CoV-2","GAGCAAAATTTTCGCT",8,100.08,9.91,-0.92,0.09,2.47,1.02,0,">1 nonsynonymous","G51S D59A K114L",3
"lib2","SARS-CoV-2","GAGCAAACACAATGGC",8,62.37,9.06,-1.78,0.16,1.81,1.14,0.01,"1 nonsynonymous","R127L",1
"lib2","SARS-CoV-2","GAGCAAACGACCAATT",6,0.06,NA,NA,NA,NA,NA,NA,"stop","G83* V103T V153E",3
"lib2","SARS-CoV-2","GAGCAAAGGGTCACCC",3,0.48,NA,NA,NA,NA,NA,NA,"stop","F44K A89R L122Y L162V K198*",5
"lib2","SARS-CoV-2","GAGCAAAGTTTTTTAG",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E T15F Y21V",3
"lib2","SARS-CoV-2","GAGCAAATCGCCCTGT",1,9.71,8.43,-2.4,0.3,1.5,1,0.04,">1 nonsynonymous","Y21W S41K L162W",3
"lib2","SARS-CoV-2","GAGCAAATGAAATGAA",8,80.23,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y91S F99R Y121L N157E F167A",5
"lib2","SARS-CoV-2","GAGCAAATTGTACTAT",2,18.74,9.41,-1.43,0.24,2.43,1,0.03,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","GAGCAACAATAAGATA",1,38.67,8.5,-2.33,0.22,2.09,1.11,0.02,">1 nonsynonymous","A18V Y119P S129L",3
"lib2","SARS-CoV-2","GAGCAACATCCAAAAA",3,112.07,9.21,-1.62,0.05,2.88,1.08,0,">1 nonsynonymous","N4V G117S",2
"lib2","SARS-CoV-2","GAGCAACTAGAAGTTT",6,63.23,10.1,-0.74,0.06,2.66,1.06,0,">1 nonsynonymous","N13F V32L",2
"lib2","SARS-CoV-2","GAGCAACTATTTAAAA",2,49.28,10.75,-0.08,0.04,2.93,1.08,0,"1 nonsynonymous","S184I",1
"lib2","SARS-CoV-2","GAGCAACTCGACAGAA",3,34.07,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50H G86S",2
"lib2","SARS-CoV-2","GAGCAACTGTAGTCTT",3,28.86,7.82,-3.02,0.24,1.5,1.07,0.02,">1 nonsynonymous","S19P D90S A105I",3
"lib2","SARS-CoV-2","GAGCAAGAAAATACGG",8,142.28,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S129H N151F F167G Q176R",4
"lib2","SARS-CoV-2","GAGCAAGCAATATCCA",12,5.36,NA,NA,NA,NA,NA,NA,"stop","V71L G86L K94Q F126L P169*",5
"lib2","SARS-CoV-2","GAGCAAGCACCACACA",2,22.18,6.92,-3.92,0.45,1.5,1.16,0.04,">1 nonsynonymous","N1M G9P W106E",3
"lib2","SARS-CoV-2","GAGCAAGCTGTCCTCG",7,117.57,6,-4.84,1.22,1.5,1.15,0.01,">1 nonsynonymous","K26G D59V Y119F",3
"lib2","SARS-CoV-2","GAGCAAGGCTAGAACA",6,323.14,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G172Y Q176V",2
"lib2","SARS-CoV-2","GAGCAAGGTTCAACAG",1,16.99,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P96L P169D",2
"lib2","SARS-CoV-2","GAGCAAGTACCTTGAA",3,46.73,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K56V D90Y Y165K",3
"lib2","SARS-CoV-2","GAGCAAGTCAAGCACG",1,7.86,10.66,-0.18,0.08,2.95,1,0.01,"1 nonsynonymous","T140W",1
"lib2","SARS-CoV-2","GAGCAATCGACGACAC",8,65.33,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V20L P133L Q144L K198A",4
"lib2","SARS-CoV-2","GAGCAATCTCTTGATG",1,15.04,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D68E D98L Y143H Q176K",4
"lib2","SARS-CoV-2","GAGCAATCTTCCGGAC",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83N I88P D97A S139F",4
"lib2","SARS-CoV-2","GAGCACAAAAAATGAG",2,0.15,NA,NA,NA,NA,NA,NA,"stop","L125M F134C P149M G166I C195*",5
"lib2","SARS-CoV-2","GAGCACAAAATGCCGC",8,455.37,9.46,-1.37,0.05,2.69,1.07,0,">1 nonsynonymous","F44R Y119R",2
"lib2","SARS-CoV-2","GAGCACAAACTACAAT",4,23.3,7.95,-2.88,0.11,1.68,1.04,0,">1 nonsynonymous","F12E G166A",2
"lib2","SARS-CoV-2","GAGCACAAATAACAAC",12,62.13,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G9S G86I G152P G174K",4
"lib2","SARS-CoV-2","GAGCACAAGTAATTCT",2,46.9,10.94,0.1,0.08,2.86,1.05,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","GAGCACACCCAATCAT",8,308.65,6.65,-4.18,0.22,1.5,1.12,0.01,">1 nonsynonymous","L122A Y175G",2
"lib2","SARS-CoV-2","GAGCACACCTAGGACA",5,62.76,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51L K87Q W106R",3
"lib2","SARS-CoV-2","GAGCACACCTATTTAG",3,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T I88W N130V G166V",4
"lib2","SARS-CoV-2","GAGCACAGAAAATCAC",5,104.73,10.04,-0.8,0.07,2.39,1.06,0,">1 nonsynonymous","Y39T I88M",2
"lib2","SARS-CoV-2","GAGCACAGGTGCTGAT",14,5.64,NA,NA,NA,NA,NA,NA,"stop","L111N G152C Q176*",3
"lib2","SARS-CoV-2","GAGCACAGTCGACTAT",6,0.02,NA,NA,NA,NA,NA,NA,"stop","N58D T85Y T170* P177V K198G",5
"lib2","SARS-CoV-2","GAGCACATATACCATT",1,14.59,10.85,0.01,0.06,3,1.01,0,"1 nonsynonymous","G152E",1
"lib2","SARS-CoV-2","GAGCACATTGTTTGAA",3,48.36,9.7,-1.14,0.08,2,1.06,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","GAGCACCAAACGGCCG",4,99.94,9.82,-1.02,0.07,2.45,1.01,0,">1 nonsynonymous","R16E D90V V153D",3
"lib2","SARS-CoV-2","GAGCACCAGGTACCCC",6,2.22,NA,NA,NA,NA,NA,NA,"stop","D68R P82* T201D",3
"lib2","SARS-CoV-2","GAGCACCAGTTGTTTT",4,80.12,8.8,-2.03,0.06,2.96,1.05,0,">1 nonsynonymous","N120K N157T",2
"lib2","SARS-CoV-2","GAGCACCCCCAGGACT",4,2.13,NA,NA,NA,NA,NA,NA,"stop","C61R S113Y Y143* T170S",4
"lib2","SARS-CoV-2","GAGCACCCCGGTAATA",1,21.87,10.81,-0.03,0.04,2.99,1.04,0,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","GAGCACCTTACCTAGA",1,12.12,10.17,-0.66,0.06,2.89,1.05,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","GAGCACGAACTTCGGC",8,1.25,NA,NA,NA,NA,NA,NA,"stop","K87V Y93H Y119*",3
"lib2","SARS-CoV-2","GAGCACGGAATCTAAT",6,105.22,9.97,-0.86,0.06,2.22,1.05,0,">1 nonsynonymous","T46F V52S D98N P149S",4
"lib2","SARS-CoV-2","GAGCACGGCTACTCAT",7,55.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6S G9M P133Q Y165G",4
"lib2","SARS-CoV-2","GAGCACTACCAACACA",10,8.91,NA,NA,NA,NA,NA,NA,"stop","A14S A33R C102W L122S T140R Y165*",6
"lib2","SARS-CoV-2","GAGCACTACCCCGCTA",9,27.26,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L95S Q168P",2
"lib2","SARS-CoV-2","GAGCACTCCAAGCCAG",2,7.65,10.95,0.11,0.1,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCACTTCACCAAAA",3,24.87,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","N4R Q79T D98V Q176C",4
"lib2","SARS-CoV-2","GAGCAGAAAATGGGAG",6,115.09,10.3,-0.54,0.02,2.94,1.03,0,">1 nonsynonymous","C6V N110K",2
"lib2","SARS-CoV-2","GAGCAGAAAGAGCCTT",2,20.56,7.28,-3.56,0.25,1.5,1.09,0.01,">1 nonsynonymous","V37L C49Y T170K A190V T201P",5
"lib2","SARS-CoV-2","GAGCAGAACACACCAA",7,35.62,10.43,-0.4,0.07,2.89,1.02,0,">1 nonsynonymous","I2A R27M P133S",3
"lib2","SARS-CoV-2","GAGCAGAACACTCTAT",6,69.27,10.45,-0.38,0.05,2.87,1.02,0,"1 nonsynonymous","T15G",1
"lib2","SARS-CoV-2","GAGCAGAACACTGTCC",2,118.57,10.37,-0.47,0.04,2.93,1.02,0,">1 nonsynonymous","G83F Y91N",2
"lib2","SARS-CoV-2","GAGCAGAATAACGCGG",7,193.36,8.72,-2.12,0.07,2.96,1.1,0,"1 nonsynonymous","N171R",1
"lib2","SARS-CoV-2","GAGCAGACAAATATCT",2,179.92,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y39V G51H V71S P96L Q176S",5
"lib2","SARS-CoV-2","GAGCAGACCTAACACA",1,16.26,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18C S45V Y119F",3
"lib2","SARS-CoV-2","GAGCAGAGTTATCGGA",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61T I80Y E135A",3
"lib2","SARS-CoV-2","GAGCAGATACTAAGCG",5,8.71,7.23,-3.61,0.41,1.5,1,0.04,">1 nonsynonymous","D98L W106S",2
"lib2","SARS-CoV-2","GAGCAGATGTAATGAA",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H G101Q",2
"lib2","SARS-CoV-2","GAGCAGCAACAGACGC",5,109.07,10.69,-0.15,0.06,2.88,1.08,0,">1 nonsynonymous","L5A Q168A",2
"lib2","SARS-CoV-2","GAGCAGCATATAAATT",1,22.12,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G74L E141Q G155D",3
"lib2","SARS-CoV-2","GAGCAGCTTATCGAAT",4,27.97,6.32,-4.51,0.5,1.5,1.13,0.02,">1 nonsynonymous","V77A F99R L131I",3
"lib2","SARS-CoV-2","GAGCAGGAATGTTATG",5,56.12,10.57,-0.27,0.05,3,1.01,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","GAGCAGGACGAAAACG",9,124.81,9.1,-1.73,0.06,2.79,1.13,0,">1 nonsynonymous","K87D I138S T148R",3
"lib2","SARS-CoV-2","GAGCAGTAAGGAATAC",4,45.6,7.54,-3.3,0.26,1.5,1.12,0.02,">1 nonsynonymous","N120H D137L",2
"lib2","SARS-CoV-2","GAGCAGTAGGTTCCTT",13,169.95,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S29V V103C Y123W F156M V180E",5
"lib2","SARS-CoV-2","GAGCAGTATCTTCTAG",1,21.88,10.76,-0.08,0.09,3,1.05,0,"1 nonsynonymous","A33G",1
"lib2","SARS-CoV-2","GAGCAGTCTAAGTGGA",2,7.73,10.57,-0.27,0.18,2.83,1.22,0.01,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","GAGCAGTGAAACAATA",4,54.27,9.91,-0.92,0.06,2.02,1,0,">1 nonsynonymous","G9R F62S V71L",3
"lib2","SARS-CoV-2","GAGCAGTTAACGTGGA",9,26.65,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","T3S V20W T46D",3
"lib2","SARS-CoV-2","GAGCAGTTTACACCGG",5,83.31,10.59,-0.25,0.03,2.94,1.01,0,">1 nonsynonymous","L5K N24V S29E",3
"lib2","SARS-CoV-2","GAGCAGTTTCAAATCC",4,93.59,10.82,-0.02,0.04,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGCATAACTTTGAAA",4,27.66,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C102S K198M",2
"lib2","SARS-CoV-2","GAGCATAGCAAATTAC",1,27.28,9.95,-0.88,0.12,2.42,1.01,0.01,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","GAGCATAGGGAAATAG",7,200.81,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","R25S S45W L95S S139N",4
"lib2","SARS-CoV-2","GAGCATATCATAAACT",4,0.35,NA,NA,NA,NA,NA,NA,"stop","F44Q D59* I142A G166V",4
"lib2","SARS-CoV-2","GAGCATATCCTAGTAC",2,44.91,9.67,-1.16,0.12,2.12,1.06,0.01,">1 nonsynonymous","E10F T15N",2
"lib2","SARS-CoV-2","GAGCATCACATGACTG",5,107.47,6.16,-4.68,0.56,1.5,1.12,0.01,">1 nonsynonymous","C61L W106F Q168K G174N",4
"lib2","SARS-CoV-2","GAGCATCATTGCCCAG",1,6.84,6.87,-3.96,0.45,3,1.1,0,">1 nonsynonymous","N13M A105K",2
"lib2","SARS-CoV-2","GAGCATCATTGTAATA",9,122.62,10.78,-0.05,0.05,2.8,1.12,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","GAGCATCCATAACCAT",3,7.74,10.81,-0.02,0.07,2.93,1.09,0,">1 nonsynonymous","G51S T201W",2
"lib2","SARS-CoV-2","GAGCATCTGGCTTCTA",1,19.12,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E135M E141K N157C",3
"lib2","SARS-CoV-2","GAGCATGACCTCAGAC",15,305.55,10.06,-0.78,0.06,2.55,1.02,0,"1 nonsynonymous","K94M",1
"lib2","SARS-CoV-2","GAGCATGATCCTCTCA",2,14.24,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88W T100Y W106R S113H G174I",5
"lib2","SARS-CoV-2","GAGCATGCACCAATAT",1,8.69,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","A89L D98V",2
"lib2","SARS-CoV-2","GAGCATGCACTCACAT",7,118.16,8.14,-2.7,0.38,1.5,1.01,0.06,">1 nonsynonymous","C6R D112K Q144S",3
"lib2","SARS-CoV-2","GAGCATTCAAGATAGT",10,343.95,10.03,-0.8,0.04,2.82,1.04,0,">1 nonsynonymous","Y35F F44E Q144D P149H",4
"lib2","SARS-CoV-2","GAGCATTCAGGAAAAG",12,239.37,9.83,-1.01,0.02,2.91,1.09,0,"1 nonsynonymous","F44N",1
"lib2","SARS-CoV-2","GAGCATTCCATTCACA",14,111.92,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28W C61E D98E D112L K132E G174Y",6
"lib2","SARS-CoV-2","GAGCATTCTCCAATGT",13,127.88,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F47W T100Y N107F Y119C V180I",5
"lib2","SARS-CoV-2","GAGCATTGTAAAACGG",3,13.41,10.11,-0.72,0.12,2.82,1,0,">1 nonsynonymous","A14R F44T",2
"lib2","SARS-CoV-2","GAGCCAAACCCAACAG",3,46.5,10.78,-0.06,0.06,2.94,1.1,0,">1 nonsynonymous","F44M P197A",2
"lib2","SARS-CoV-2","GAGCCAAATTAAAACC",12,62.5,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K56Q A67D K128E G146S",4
"lib2","SARS-CoV-2","GAGCCAAATTTCTAGT",2,14.95,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N92A K114S G166T",3
"lib2","SARS-CoV-2","GAGCCAACACGCCTCT",1,19.54,7.92,-2.92,0.19,1.5,1.06,0.01,">1 nonsynonymous","N58Y N107T S200R",3
"lib2","SARS-CoV-2","GAGCCAAGAAACTAAT",1,79.89,9.14,-1.69,0.05,2.93,1.07,0,">1 nonsynonymous","G9N F47L Y119A",3
"lib2","SARS-CoV-2","GAGCCAATAACAAGAT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","L5* S43G W106T",3
"lib2","SARS-CoV-2","GAGCCACACAACGATG",3,17.63,6.16,-4.67,0.46,2.06,1.1,0.01,">1 nonsynonymous","V20M A81R Y123K",3
"lib2","SARS-CoV-2","GAGCCACACCATCCGG",5,23.54,8.91,-1.92,0.22,1.5,1.03,0.02,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","GAGCCACCGAAAGCAA",2,45.74,10.87,0.03,0.06,2.94,1.07,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","GAGCCACGACGCACAT",8,15.65,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","V65W C102S G116M G152L",4
"lib2","SARS-CoV-2","GAGCCAGATCCACCAT",1,25.84,10.97,0.14,0.09,2.9,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCCAGGCAGTAGTA",8,125.85,10.44,-0.4,0.04,2.91,1.03,0,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","GAGCCAGGTGTCTATT",6,51.85,6.49,-4.35,0.61,1.5,1.16,0.03,">1 nonsynonymous","G9V S41D F99W W106R V153D F167P",6
"lib2","SARS-CoV-2","GAGCCAGTCACAGTCA",3,5.38,11.38,0.55,0.19,2.86,1.15,0,">1 nonsynonymous","K56S T148I",2
"lib2","SARS-CoV-2","GAGCCAGTTATTCTCG",3,23.74,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","D68V W106A Y143E",3
"lib2","SARS-CoV-2","GAGCCATAAAATACCT",1,7.04,10.43,-0.41,0.14,2.99,1.06,0.01,">1 nonsynonymous","D59N G152S",2
"lib2","SARS-CoV-2","GAGCCATAATGTCTGA",9,106.54,9.69,-1.15,0.03,2.97,1.06,0,"1 nonsynonymous","Y119F",1
"lib2","SARS-CoV-2","GAGCCATCCCAAGTTC",12,40.63,6,-4.84,1.06,1.5,1.19,0.02,">1 nonsynonymous","S43F T63N S139T C158I E186V",5
"lib2","SARS-CoV-2","GAGCCATGAATGAATA",2,19.6,9.35,-1.48,0.21,2.02,1.17,0.02,">1 nonsynonymous","L38D L60A",2
"lib2","SARS-CoV-2","GAGCCCACCTCAAGTT",1,48.78,9.85,-0.99,0.04,2.98,1.04,0,">1 nonsynonymous","P7T K87L S129K Q144T",4
"lib2","SARS-CoV-2","GAGCCCCACACACGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","K56Y D90Y Y159*",3
"lib2","SARS-CoV-2","GAGCCCCCAACTAGAA",2,10.39,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","I2F D68K G101E",3
"lib2","SARS-CoV-2","GAGCCCCCCAGCAAAA",3,4.78,NA,NA,NA,NA,NA,NA,"stop","A81* W106L T140I",3
"lib2","SARS-CoV-2","GAGCCCCCCGACTATA",17,81.09,6.88,-3.96,0.42,1.5,1.16,0.04,">1 nonsynonymous","P82S D90N Y123H S129A",4
"lib2","SARS-CoV-2","GAGCCCCTGAACAAAC",4,145.35,9.9,-0.94,0.05,2.5,1.07,0,">1 nonsynonymous","N107A K128Y",2
"lib2","SARS-CoV-2","GAGCCCCTGACAGAAT",3,93.2,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","T85K R124I",2
"lib2","SARS-CoV-2","GAGCCCGAACAGAAAC",7,2.19,NA,NA,NA,NA,NA,NA,"stop","G51V F126* G174*",3
"lib2","SARS-CoV-2","GAGCCCGATAACTATG",2,32.68,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A22V G86C Q144Y",3
"lib2","SARS-CoV-2","GAGCCCGCAACGATTT",12,184.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N120V I142V N157C F167L",4
"lib2","SARS-CoV-2","GAGCCCGGCTACAACG",1,86.94,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V11T S45T Q84P F160T Y178N",5
"lib2","SARS-CoV-2","GAGCCCGTTGAAGCAA",2,12.23,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6I F47Y P82N D98T G155C",5
"lib2","SARS-CoV-2","GAGCCCTCAAAAGCAC",8,35.78,9.11,-1.73,0.24,1.5,1,0.03,">1 nonsynonymous","S69G D97G",2
"lib2","SARS-CoV-2","GAGCCCTCCACCTTAT",1,36.9,10.85,0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCCCTGACTAAGTC",12,195.39,8.34,-2.49,0.09,2.5,1.07,0,">1 nonsynonymous","A42L S113R",2
"lib2","SARS-CoV-2","GAGCCGAACACAGTCG",1,60.13,10.26,-0.58,0.04,2.96,1.06,0,">1 nonsynonymous","S41T L122W G155S",3
"lib2","SARS-CoV-2","GAGCCGAAGACTAACA",2,55.51,9.84,-1,0.04,2.88,1.09,0,">1 nonsynonymous","E10L C61V F156L",3
"lib2","SARS-CoV-2","GAGCCGAAGGCGTATA",9,26.42,7.04,-3.79,0.47,1.5,1.07,0.05,">1 nonsynonymous","G101Y K198H",2
"lib2","SARS-CoV-2","GAGCCGACCAACTGGA",9,86.92,8.02,-2.82,0.16,1.62,1.15,0.01,">1 nonsynonymous","Y35A N107Q N120V",3
"lib2","SARS-CoV-2","GAGCCGATAAGGGATG",2,53.77,10.88,0.04,0.03,2.83,1.18,0,">1 nonsynonymous","I28F P149A",2
"lib2","SARS-CoV-2","GAGCCGATTCAATAGG",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F T46Y",2
"lib2","SARS-CoV-2","GAGCCGCGCAAAAACA",10,77.03,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K94L I104T L188Q",3
"lib2","SARS-CoV-2","GAGCCGCTAGAGTCTT",4,0.28,NA,NA,NA,NA,NA,NA,"stop","F8E K26* T63N V103E",4
"lib2","SARS-CoV-2","GAGCCGCTCTGCCAGC",2,26,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","G9L R73I I80M",3
"lib2","SARS-CoV-2","GAGCCGGCATAAATCT",11,224.58,10.47,-0.37,0.03,2.92,1.05,0,">1 nonsynonymous","G9P E141K T201V",3
"lib2","SARS-CoV-2","GAGCCGGCCATAAAAA",2,48.48,10.84,0,0.07,2.86,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCCGTACAGGATAG",2,6.11,8.94,-1.89,0.17,2.18,1,0.02,">1 nonsynonymous","L60R L122C S139F",3
"lib2","SARS-CoV-2","GAGCCGTAGAGCTGAA",1,4.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","GAGCCGTCAACTTACG",1,2.64,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","GAGCCGTTAACGGCAT",6,20.66,6,-4.84,2,3,1.34,0.02,">1 nonsynonymous","A33K G83I A145G",3
"lib2","SARS-CoV-2","GAGCCGTTTACGCGTA",1,10.42,8,-2.84,0.42,1.5,1,0.06,">1 nonsynonymous","S69E G116F T201S",3
"lib2","SARS-CoV-2","GAGCCTAAACCACTTA",2,39.72,10.65,-0.19,0.07,2.95,1.08,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","GAGCCTAAGACTATAT",3,62.21,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3R Y35G W106P D112T",4
"lib2","SARS-CoV-2","GAGCCTAAGGACAGTT",16,216.02,10.29,-0.55,0.03,2.91,1.03,0,">1 nonsynonymous","F47C S53V",2
"lib2","SARS-CoV-2","GAGCCTACTCGAGCTG",4,38.43,10.04,-0.8,0.13,2.36,1.01,0.01,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","GAGCCTACTTAAATCA",5,80.03,10.76,-0.08,0.04,2.87,1.13,0,"1 nonsynonymous","Q168A",1
"lib2","SARS-CoV-2","GAGCCTAGGGCTCGTA",1,18.64,6.51,-4.33,0.4,1.5,1.11,0.02,">1 nonsynonymous","R16I F167M G174C",3
"lib2","SARS-CoV-2","GAGCCTCCCCCAAGAA",3,7.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T3L V37Y K94N Y121C F160P",5
"lib2","SARS-CoV-2","GAGCCTCTACACAATT",4,81.67,9.64,-1.19,0.06,2.58,1.07,0,">1 nonsynonymous","S45V R78W",2
"lib2","SARS-CoV-2","GAGCCTGAAGGTCTTT",10,47.19,6,-4.84,0.58,2.48,1.14,0,">1 nonsynonymous","C6W G116S G155V",3
"lib2","SARS-CoV-2","GAGCCTGATTAACAAC",3,40.35,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F17R F99L Y143S",3
"lib2","SARS-CoV-2","GAGCCTTCAAAACTGT",4,39.07,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","D112L R127T K198N",3
"lib2","SARS-CoV-2","GAGCCTTCAAAATCAA",24,323.41,10.09,-0.75,0.06,2.61,1.05,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","GAGCCTTCAGCCGTAT",8,37.91,7.58,-3.25,0.28,1.5,1,0.03,">1 nonsynonymous","Y91L R136M E154F G166S",4
"lib2","SARS-CoV-2","GAGCCTTTAACCGTTT",9,36.74,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D59R L60I F99K W106Q",4
"lib2","SARS-CoV-2","GAGCCTTTAGGTCAAT",1,7.62,9.99,-0.85,0.2,2.53,1,0.02,"1 nonsynonymous","Y91G",1
"lib2","SARS-CoV-2","GAGCCTTTATAAAAGG",7,76.44,10.41,-0.42,0.05,2.93,1.04,0,">1 nonsynonymous","F62V T140P",2
"lib2","SARS-CoV-2","GAGCCTTTGGATATGT",7,55.46,10.1,-0.74,0.09,2.39,1.04,0.01,">1 nonsynonymous","A42D W106T",2
"lib2","SARS-CoV-2","GAGCGAAACTGATGAT",2,8.14,NA,NA,NA,NA,NA,NA,"stop","G9V S19F D34G D98G D112Q L122* Q168S",7
"lib2","SARS-CoV-2","GAGCGAAAGATAAAGA",10,1.11,NA,NA,NA,NA,NA,NA,"stop","D75Y P82* G86E Y91E E154K H189I",6
"lib2","SARS-CoV-2","GAGCGAACACTGGCCA",8,5.87,NA,NA,NA,NA,NA,NA,"stop","G117* E141Y",2
"lib2","SARS-CoV-2","GAGCGAACATAGGCCT",1,18.56,8.95,-1.89,0.18,1.79,1.09,0.01,">1 nonsynonymous","N4S R16C T63G A89V",4
"lib2","SARS-CoV-2","GAGCGAACATCGAATA",3,28.75,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G86V G146H E186P",3
"lib2","SARS-CoV-2","GAGCGAAGCATAATCT",4,42.23,10.72,-0.12,0.04,2.9,1.11,0,"1 nonsynonymous","S45N",1
"lib2","SARS-CoV-2","GAGCGAATTGCCACCA",9,10.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S I104N F160Q",3
"lib2","SARS-CoV-2","GAGCGAATTTAAGATA",1,12.39,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C61I L122E R179L",3
"lib2","SARS-CoV-2","GAGCGACAAAAGAATT",12,1282.82,10.74,-0.1,0.03,2.97,1.04,0,">1 nonsynonymous","E10V L122R",2
"lib2","SARS-CoV-2","GAGCGACACCTAGGAC",2,38.07,10.31,-0.52,0.07,2.88,1,0,">1 nonsynonymous","Y35T G152H",2
"lib2","SARS-CoV-2","GAGCGACACTAAGGTG",3,58.28,9.74,-1.1,0.06,2.88,1.11,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","GAGCGACCGTCATTCT",3,43.3,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K87S L95K",2
"lib2","SARS-CoV-2","GAGCGAGAAACAATAG",17,210.77,8.22,-2.62,0.13,1.99,1.1,0.01,">1 nonsynonymous","R27Q Y91W G152A T170N H189T",5
"lib2","SARS-CoV-2","GAGCGAGACAGATATA",2,58.12,10.8,-0.03,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCGAGAGCAAAGAC",5,6.34,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N13I S43V V71F I142M",4
"lib2","SARS-CoV-2","GAGCGAGGAAAGCTAG",2,29.57,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y91T G101D A190S",3
"lib2","SARS-CoV-2","GAGCGATAAACACGAT",3,26.28,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","Y21A N109T G152K",3
"lib2","SARS-CoV-2","GAGCGATGTACGTTTT",3,8.33,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","Y35M S45N P96C V182P T201E",5
"lib2","SARS-CoV-2","GAGCGCAATCTATACA",7,78.59,8.32,-2.51,0.14,2.82,1.04,0.01,">1 nonsynonymous","R16G Y159V",2
"lib2","SARS-CoV-2","GAGCGCACCAAATATG",2,38.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10K V77N E154F T201R",4
"lib2","SARS-CoV-2","GAGCGCATGATACGTT",4,0.3,NA,NA,NA,NA,NA,NA,"stop","N92S T100R K128W E154*",4
"lib2","SARS-CoV-2","GAGCGCGAGTAAACCG",1,75.11,10.86,0.03,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCGCGCTTACCAAG",7,116.54,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A14R Y35T C61T L131G E154N G174K",6
"lib2","SARS-CoV-2","GAGCGCTATTGATCCA",5,59.22,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N40A S53L R124P",3
"lib2","SARS-CoV-2","GAGCGCTTCCGACAAA",1,29.07,9.95,-0.88,0.09,2.59,1,0,">1 nonsynonymous","L5C E10H G83N N120S",4
"lib2","SARS-CoV-2","GAGCGGAAACTCGCGA",1,34.34,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","I2Q G9L K26I K94Q G152V",5
"lib2","SARS-CoV-2","GAGCGGAACCAGACCA",8,5.66,NA,NA,NA,NA,NA,NA,"stop","G9* A190F",2
"lib2","SARS-CoV-2","GAGCGGACACAACGAG",2,11.83,10.67,-0.17,0.13,3,1.06,0.01,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","GAGCGGACTATCACGC",1,74.24,10.26,-0.57,0.06,2.71,1.11,0,">1 nonsynonymous","F44R P191T",2
"lib2","SARS-CoV-2","GAGCGGAGTTAAGCAA",3,17.37,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D98M F167G",2
"lib2","SARS-CoV-2","GAGCGGCCAAATCTCT",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T G83L G146W G166L",4
"lib2","SARS-CoV-2","GAGCGGGAACGGGCCG",2,29.38,10.42,-0.42,0.18,2.63,1.12,0.01,">1 nonsynonymous","L5R S139N",2
"lib2","SARS-CoV-2","GAGCGGTATAAACTAA",16,230.22,10.84,0,0.03,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCGGTCCTTACTGC",1,12.9,10.71,-0.13,0.1,2.93,1.11,0,"1 nonsynonymous","N4D",1
"lib2","SARS-CoV-2","GAGCGTACAGTACAAT",2,17.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4K F8H L60A K94T S164W",5
"lib2","SARS-CoV-2","GAGCGTAGCATTAATT",2,18.26,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","T3S N107M G166L G174E",4
"lib2","SARS-CoV-2","GAGCGTCTACGCTCTG",4,12.06,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","Q84D L95H G116Y",3
"lib2","SARS-CoV-2","GAGCGTTAACCCCATC",11,72,6,-4.84,2,3,1.21,0,">1 nonsynonymous","F47Y L95K",2
"lib2","SARS-CoV-2","GAGCGTTACAGTTGAC",5,28.75,8.61,-2.23,0.36,1.5,1,0.06,">1 nonsynonymous","A42W T46I N107R S184I",4
"lib2","SARS-CoV-2","GAGCTAAAACCCCAAA",17,10.52,NA,NA,NA,NA,NA,NA,"stop","N4* D59R L122K",3
"lib2","SARS-CoV-2","GAGCTAAACGACTACG",6,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96I F156L Q168P",3
"lib2","SARS-CoV-2","GAGCTAAAGAAACAAG",5,17.73,6,-4.84,2,1.5,1.41,0.05,">1 nonsynonymous","A18W S43R F99G L183R",4
"lib2","SARS-CoV-2","GAGCTAACAACTCCAA",5,212.92,10.47,-0.37,0.04,2.95,1.06,0,">1 nonsynonymous","T55I Q163N",2
"lib2","SARS-CoV-2","GAGCTAACATCGTCAC",6,28.2,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","E10L S43C A105D",3
"lib2","SARS-CoV-2","GAGCTAACGGTGCTGA",3,91.41,8.83,-2.01,0.07,2.57,1.09,0,">1 nonsynonymous","A14G S113T",2
"lib2","SARS-CoV-2","GAGCTAAGCTAAAGGT",3,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A D68R W106E Y143C",4
"lib2","SARS-CoV-2","GAGCTAATGATACACT",3,6.54,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L5F E10M V71G G146N C158S",5
"lib2","SARS-CoV-2","GAGCTAATGGTTTAGC",11,152.19,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9A L162P G174Q",3
"lib2","SARS-CoV-2","GAGCTAATGTACAAAA",1,14.91,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y119F R136C Y143C T201N",4
"lib2","SARS-CoV-2","GAGCTACAGAAGATGT",2,16.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E T55D G83N K94G N107G",5
"lib2","SARS-CoV-2","GAGCTACAGTTATAAA",4,95.96,10.78,-0.05,0.05,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCTACCATCAAACA",2,64.24,10.86,0.02,0.07,2.92,1.06,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","GAGCTACCTACACCGG",11,4.22,NA,NA,NA,NA,NA,NA,"stop","L57G S69K D97I V103N F134* E141K L162I V180E",8
"lib2","SARS-CoV-2","GAGCTACCTCCTTAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I A14I A105M V115L Y175I",5
"lib2","SARS-CoV-2","GAGCTACGGCGACCAA",13,90.46,8.59,-2.24,0.33,1.5,1,0.05,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","GAGCTACTAAGCTGTG",9,181.9,10.74,-0.1,0.03,2.95,1.04,0,">1 nonsynonymous","T3W A192G",2
"lib2","SARS-CoV-2","GAGCTAGAAAATTTAT",5,1.43,NA,NA,NA,NA,NA,NA,"stop","S36V Y121* S129N",3
"lib2","SARS-CoV-2","GAGCTAGAGAGAGATT",7,135.92,10.45,-0.39,0.04,2.82,1.13,0,">1 nonsynonymous","A18G F160D T201L",3
"lib2","SARS-CoV-2","GAGCTAGCAAAAAATA",6,86.27,9.85,-0.99,0.06,2.85,1.06,0,"1 nonsynonymous","F44N",1
"lib2","SARS-CoV-2","GAGCTAGGTCGAACGC",1,15.84,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","Y35C L60P P96S K114W P169L",5
"lib2","SARS-CoV-2","GAGCTAGTAATGGGTA",13,37.06,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C61Y T140P R179S",3
"lib2","SARS-CoV-2","GAGCTAGTGCTCAACG",4,17.52,7.36,-3.47,0.43,1.5,1.11,0.05,">1 nonsynonymous","N4Y N107T E141V",3
"lib2","SARS-CoV-2","GAGCTATAACCGTGCC",18,270.63,10.85,0.01,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCTATATCGTAAAG",15,104.29,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48L R124F",2
"lib2","SARS-CoV-2","GAGCTATGTTGAAGTT",7,90.22,10.59,-0.25,0.04,2.93,1.06,0,">1 nonsynonymous","T3G S41G",2
"lib2","SARS-CoV-2","GAGCTATGTTTTGAGA",2,7.07,10.53,-0.31,0.14,2.85,1.06,0.01,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","GAGCTATTACTCTAAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L K114P L162M Y175L A190T",5
"lib2","SARS-CoV-2","GAGCTCAAGAACCATT",1,44.23,10.43,-0.41,0.05,2.78,1.22,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","GAGCTCAATATCAGTA",3,22.82,6,-4.84,1.92,1.51,1.14,0.02,">1 nonsynonymous","L5C L60R W106N",3
"lib2","SARS-CoV-2","GAGCTCAATCATAGGA",3,21.39,6,-4.84,1.8,1.5,1.27,0.04,">1 nonsynonymous","C6W V52K T63V",3
"lib2","SARS-CoV-2","GAGCTCACAGTAACCG",5,39.97,10.78,-0.06,0.02,3,1,0,"1 nonsynonymous","I138Q",1
"lib2","SARS-CoV-2","GAGCTCACCGCAAACG",4,79.45,8.53,-2.31,0.22,1.5,1,0.02,">1 nonsynonymous","K56T V103C",2
"lib2","SARS-CoV-2","GAGCTCAGTGAACCTG",1,53.91,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43E S113L C158Y G172R",4
"lib2","SARS-CoV-2","GAGCTCATGCGTCTTA",4,56.14,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40M G83S G117T Y175G",4
"lib2","SARS-CoV-2","GAGCTCATTAAAAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","A22T K114L F160I R179*",4
"lib2","SARS-CoV-2","GAGCTCATTTCGATAA",1,97.99,10.63,-0.2,0.04,2.97,1,0,"1 nonsynonymous","I138Y",1
"lib2","SARS-CoV-2","GAGCTCCAGAAGGAAG",7,3.5,NA,NA,NA,NA,NA,NA,"stop","A18* T55L L95Q N110V G155A",5
"lib2","SARS-CoV-2","GAGCTCCATGTGAAAG",3,32.71,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N107C N157Y",2
"lib2","SARS-CoV-2","GAGCTCGAGTCAACTG",3,35.91,9.86,-0.97,0.13,2.29,1.03,0.01,">1 nonsynonymous","N13L F44D",2
"lib2","SARS-CoV-2","GAGCTCGATTTAATCA",6,180.83,9.37,-1.46,0.05,2.94,1.09,0,">1 nonsynonymous","Y119A K128T",2
"lib2","SARS-CoV-2","GAGCTCGATTTCTGAA",7,0.51,NA,NA,NA,NA,NA,NA,"stop","R16F D59C K87*",3
"lib2","SARS-CoV-2","GAGCTCGGATAACCCT",9,47.22,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","G51Y F99G",2
"lib2","SARS-CoV-2","GAGCTCTACAAACTTA",16,102.79,9.8,-1.03,0.07,2.31,1.04,0,"1 nonsynonymous","I104G",1
"lib2","SARS-CoV-2","GAGCTCTACCTAAAAA",5,61.74,9.4,-1.44,0.1,1.79,1.07,0,">1 nonsynonymous","G51D D90T",2
"lib2","SARS-CoV-2","GAGCTCTTTAAGTGAC",1,29.91,10.8,-0.03,0.03,3,1.01,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","GAGCTGAAACCGCTGA",1,11.64,8.47,-2.36,0.27,1.81,1.2,0.02,">1 nonsynonymous","T46W C49Y",2
"lib2","SARS-CoV-2","GAGCTGAAATAACTGC",6,25.99,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T63C P96M C102L",3
"lib2","SARS-CoV-2","GAGCTGAAGGCAATAC",5,50.2,10.59,-0.24,0.05,2.86,1.1,0,"1 nonsynonymous","N58I",1
"lib2","SARS-CoV-2","GAGCTGAGCACTACTA",11,5.13,NA,NA,NA,NA,NA,NA,"stop","L60A F134* G166*",3
"lib2","SARS-CoV-2","GAGCTGATGACTTTTC",10,81.82,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L5F F99L D137N",3
"lib2","SARS-CoV-2","GAGCTGATTTTTTTCG",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y D90L V103P Q176H Y178N",5
"lib2","SARS-CoV-2","GAGCTGCAGATGCTAA",3,35.21,10.43,-0.4,0.04,2.9,1.14,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","GAGCTGCCAACGTTTT",17,375.28,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39N S45E F167V",3
"lib2","SARS-CoV-2","GAGCTGGAAAAAATAG",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V S43C P149R G152S K199G",5
"lib2","SARS-CoV-2","GAGCTGGATACATCCG",2,23.11,10.86,0.03,0.07,2.94,1.07,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","GAGCTGGCCATACCAT",1,20.45,9.61,-1.23,0.08,2.02,1.03,0,">1 nonsynonymous","R78M V182T",2
"lib2","SARS-CoV-2","GAGCTGGGATGAATCC",5,43.27,9.94,-0.9,0.08,2.95,1.04,0,">1 nonsynonymous","V37L L125V",2
"lib2","SARS-CoV-2","GAGCTGGGTTGTTCTT",9,48.02,7.12,-3.71,0.26,1.5,1.13,0.01,">1 nonsynonymous","N4K V77N",2
"lib2","SARS-CoV-2","GAGCTGTAGATGATAG",2,58.48,9.26,-1.57,0.07,2.79,1.09,0,">1 nonsynonymous","D90S N110K Y119P K132S",4
"lib2","SARS-CoV-2","GAGCTGTTTCCTAACC",12,259.06,10.19,-0.64,0.03,2.72,1.03,0,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","GAGCTTAAAAATCAGT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","I2T C49K F62D G83L A89* I104V P197V",7
"lib2","SARS-CoV-2","GAGCTTAAATTTAATC",3,6.71,6.83,-4.01,0.28,2.15,1.15,0.01,">1 nonsynonymous","F12K N58G D98N V103K L162C",5
"lib2","SARS-CoV-2","GAGCTTAACCAAGGGC",3,13.19,9.29,-1.54,0.41,1.5,1.23,0.04,">1 nonsynonymous","N4K S45V T100D",3
"lib2","SARS-CoV-2","GAGCTTAAGAGAGCAT",2,44.21,6.71,-4.13,0.42,1.5,1.1,0.03,">1 nonsynonymous","D98V W106C N120H",3
"lib2","SARS-CoV-2","GAGCTTAATCTGTCCT",2,24.54,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","P7V N40E C158M",3
"lib2","SARS-CoV-2","GAGCTTAATTCTGGAT",3,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119P N130L C158R Y165H",4
"lib2","SARS-CoV-2","GAGCTTAATTTTTTAT",4,19.06,9.75,-1.09,0.17,2.1,1.15,0.01,">1 nonsynonymous","A14P S53M N130V T201L",4
"lib2","SARS-CoV-2","GAGCTTACACAAATTG",5,40.55,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F44N N58C P82A K94L A192T",5
"lib2","SARS-CoV-2","GAGCTTACGAATTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* Q84K G101S N107K Y119F P177I",6
"lib2","SARS-CoV-2","GAGCTTACTCAAACAT",2,13.53,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","K132N V180R",2
"lib2","SARS-CoV-2","GAGCTTAGCACAAACT",6,75.31,10.81,-0.03,0.03,2.93,1.09,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","GAGCTTAGCTTGAAAA",3,67.84,8.22,-2.62,0.14,2.12,1.06,0.01,">1 nonsynonymous","C6F Y91L Y119P",3
"lib2","SARS-CoV-2","GAGCTTATGAAAAATG",4,68.45,10.84,0.01,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGCTTCGTGATCTTA",10,194.76,10.05,-0.79,0.04,2.89,1.08,0,"1 nonsynonymous","I142A",1
"lib2","SARS-CoV-2","GAGCTTCTAAAACGAC",7,56.77,10.82,-0.02,0.04,2.91,1.07,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","GAGCTTCTTATCACAG",4,69.49,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S45A T100D Q176R",3
"lib2","SARS-CoV-2","GAGCTTCTTTGTACAA",1,25.77,10.76,-0.08,0.06,2.84,1.16,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","GAGCTTGAAGATTGCG",3,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97C N118P V181N",3
"lib2","SARS-CoV-2","GAGCTTGTAACCTTCG",2,82.49,9.28,-1.56,0.04,2.94,1.08,0,">1 nonsynonymous","T46D Y119K",2
"lib2","SARS-CoV-2","GAGCTTTATATCAAAC",5,82.87,10.54,-0.3,0.04,2.91,1.1,0,">1 nonsynonymous","V37T Y121F N130D",3
"lib2","SARS-CoV-2","GAGCTTTCACACAATG",3,159.51,10.79,-0.05,0.03,2.95,1.07,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","GAGCTTTCCCCATGAG",10,99.18,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6S C61L R136P",3
"lib2","SARS-CoV-2","GAGCTTTCTTTATTTA",4,60.31,6.19,-4.65,0.77,1.5,1.2,0.02,">1 nonsynonymous","G51L D97F Y123N",3
"lib2","SARS-CoV-2","GAGCTTTGGTACTAGC",5,32.87,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","I2T Y39S Y159Q Q168P",4
"lib2","SARS-CoV-2","GAGCTTTTGCGATTCT",10,90.22,6.6,-4.24,0.38,1.5,1.14,0.02,">1 nonsynonymous","F47W C150S",2
"lib2","SARS-CoV-2","GAGCTTTTGTGGCCTA",8,95.37,9.16,-1.68,0.17,1.5,1.08,0.01,">1 nonsynonymous","D59M D97N W106A Q168H",4
"lib2","SARS-CoV-2","GAGCTTTTGTTTTCAC",5,254.64,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N64P Q84M D112L G117M T140E Y175E",6
"lib2","SARS-CoV-2","GAGGAAAAAAACTTGA",2,8.58,6,-4.84,2,3,1.3,0.03,">1 nonsynonymous","V20E W106N N120P P149L",4
"lib2","SARS-CoV-2","GAGGAAAAGAGAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","N13I N40* E76G H189Y",4
"lib2","SARS-CoV-2","GAGGAAAAGTATCAAC",1,6.55,6.85,-3.98,0.09,2.15,1,0,"1 nonsynonymous","Y123D",1
"lib2","SARS-CoV-2","GAGGAAACAAATTATT",4,50.68,9.1,-1.73,0.09,2.06,1.04,0,">1 nonsynonymous","C6S V32R P96N V173E",4
"lib2","SARS-CoV-2","GAGGAAACACACAATA",8,0.37,NA,NA,NA,NA,NA,NA,"stop","P197*",1
"lib2","SARS-CoV-2","GAGGAAACATAATCAT",10,7.27,NA,NA,NA,NA,NA,NA,"stop","F47* A67C P96T N107D E135T Y175E",6
"lib2","SARS-CoV-2","GAGGAAACATCAACAA",5,1.87,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","GAGGAAACTAGTAAGG",7,124.77,8.48,-2.36,0.11,2.88,1.04,0,">1 nonsynonymous","T100I Y143N",2
"lib2","SARS-CoV-2","GAGGAAACTTGATCTA",12,47.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N13P V20P S139P",3
"lib2","SARS-CoV-2","GAGGAAAGCACGAAAA",12,60.36,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","G9C F62R D90P A105S F160S Y175A",6
"lib2","SARS-CoV-2","GAGGAAAGGTTACAAA",2,12.89,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R73V F99N Y159T",3
"lib2","SARS-CoV-2","GAGGAAATAATACTCT",20,196.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39K V103E Y121H",3
"lib2","SARS-CoV-2","GAGGAAATCGATGACG",6,66.34,8.25,-2.58,0.1,1.64,1.09,0,">1 nonsynonymous","L38V A89M L125M",3
"lib2","SARS-CoV-2","GAGGAAATGCAGCCTT",3,89.38,10.64,-0.2,0.04,2.98,1.03,0,">1 nonsynonymous","T100K F160V T201K",3
"lib2","SARS-CoV-2","GAGGAAATGTCCGAGT",4,5.89,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","N30R G51T F62T Y91N E141S",5
"lib2","SARS-CoV-2","GAGGAACAACTACTCT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","D68A A81P S113* V181R",4
"lib2","SARS-CoV-2","GAGGAACAAGTTGTTT",9,46.24,6,-4.84,2,2.31,1.12,0,">1 nonsynonymous","R16G V37C L57Y F99L",4
"lib2","SARS-CoV-2","GAGGAACCAACCCAGT",11,60.97,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K56T N64T D112P Q144L",4
"lib2","SARS-CoV-2","GAGGAACCTCAGAGTG",5,55.65,10.7,-0.14,0.07,2.93,1.05,0,">1 nonsynonymous","L60V R78P L122F",3
"lib2","SARS-CoV-2","GAGGAACGAGTTAGTT",14,109.34,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S36P P169H Y178G",3
"lib2","SARS-CoV-2","GAGGAACGTGATCCTC",18,255.14,10.72,-0.12,0.02,2.92,1.09,0,"1 nonsynonymous","R27D",1
"lib2","SARS-CoV-2","GAGGAACGTTGAAATT",4,106.26,10.72,-0.11,0.03,2.98,1.03,0,">1 nonsynonymous","N4T P149M",2
"lib2","SARS-CoV-2","GAGGAACTTGACGTCC",3,7.49,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","T15F W23C A33G N107L Y121L",5
"lib2","SARS-CoV-2","GAGGAAGAATTTATCA",4,55.14,8.64,-2.19,0.05,2.77,1.08,0,">1 nonsynonymous","F126I Q144I",2
"lib2","SARS-CoV-2","GAGGAAGCCAAATGAC",5,35.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6D T15V G86C N92T N120M G146N G152K",7
"lib2","SARS-CoV-2","GAGGAAGCTTGTCACT",3,114.41,10.29,-0.54,0.05,2.7,1.03,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","GAGGAAGTAGTATATG",1,11.18,8.65,-2.19,0.28,1.71,1.18,0.04,"1 nonsynonymous","V103C",1
"lib2","SARS-CoV-2","GAGGAAGTCATCCATT",14,58.46,6.48,-4.35,0.64,1.5,1.26,0.04,">1 nonsynonymous","A42S T63P G101I K132C",4
"lib2","SARS-CoV-2","GAGGAATCAACAACAT",2,6.54,9.94,-0.9,0.21,2.87,1,0.01,">1 nonsynonymous","A33R V173N",2
"lib2","SARS-CoV-2","GAGGAATCACTGTCGA",15,314.98,7.21,-3.62,0.18,1.5,1.11,0.01,">1 nonsynonymous","E10D V32S T46W N120P G155E",5
"lib2","SARS-CoV-2","GAGGAATCGTTTGATT",2,23.68,7.56,-3.28,0.47,1.5,1.15,0.06,">1 nonsynonymous","C6I T63N A105F",3
"lib2","SARS-CoV-2","GAGGAATCTTCCAAAC",1,26.43,9.46,-1.37,0.09,2.99,1,0,">1 nonsynonymous","A33V G146T N151E",3
"lib2","SARS-CoV-2","GAGGAATTTAAAATAG",7,154.95,9.7,-1.14,0.08,1.91,1.08,0,">1 nonsynonymous","F44A A105C",2
"lib2","SARS-CoV-2","GAGGACAACCACGAAG",1,50.38,10.74,-0.1,0.06,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGGACAAGGTGTGAA",15,203.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49F T85Y Y143R",3
"lib2","SARS-CoV-2","GAGGACAATAGACCAA",1,46.44,6,-4.84,0.68,1.5,1.12,0.01,">1 nonsynonymous","L5H S43A A145G",3
"lib2","SARS-CoV-2","GAGGACACCGACGGGG",3,42.43,10.87,0.03,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGGACAGGAAAACCA",6,110.15,10.49,-0.35,0.03,2.96,1.03,0,">1 nonsynonymous","E10T K56S Q144S",3
"lib2","SARS-CoV-2","GAGGACATACTTGCAC",4,83.25,7.22,-3.61,0.1,2.04,1.11,0,"1 nonsynonymous","C150A",1
"lib2","SARS-CoV-2","GAGGACATGAACCTCC",6,27.73,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","G101R N157L",2
"lib2","SARS-CoV-2","GAGGACATTAATGTAG",2,11.23,9.88,-0.95,0.12,2.71,1.02,0.01,">1 nonsynonymous","A105Y P149R",2
"lib2","SARS-CoV-2","GAGGACCCCAGCGGTT",3,111.79,10.2,-0.63,0.04,2.86,1.02,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","GAGGACCCGTCAATAA",7,8423.58,10.69,-0.15,0.02,2.98,1.02,0,"1 nonsynonymous","D98Q",1
"lib2","SARS-CoV-2","GAGGACCCGTTCCAGC",2,13.72,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","A81F D98S C150R",3
"lib2","SARS-CoV-2","GAGGACGAAACGAGAA",7,135.5,8.5,-2.33,0.13,3,1.09,0.01,">1 nonsynonymous","I2T G9F C61F L125E",4
"lib2","SARS-CoV-2","GAGGACGAACAAAAAC",8,38.52,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","D34I S69K Y175E",3
"lib2","SARS-CoV-2","GAGGACGAGCTAACGT",8,60.21,10.8,-0.03,0.07,2.88,1.13,0,"1 nonsynonymous","N120G",1
"lib2","SARS-CoV-2","GAGGACGCTTAACTAT",1,9.92,10,-0.84,0.15,2.33,1,0.01,">1 nonsynonymous","K48T P133I",2
"lib2","SARS-CoV-2","GAGGACGGCTGCACTA",15,228.01,8.06,-2.78,0.15,1.5,1.09,0.01,">1 nonsynonymous","S36P Q176L",2
"lib2","SARS-CoV-2","GAGGACTAGATGTTCT",16,358.49,10.6,-0.24,0.04,2.94,1.05,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","GAGGACTCCGTCTGGA",11,0.6,NA,NA,NA,NA,NA,NA,"stop","A14* L57M P82H T85E D137L F156N",6
"lib2","SARS-CoV-2","GAGGACTCCTTCCTCC",11,102.85,9.3,-1.54,0.12,1.74,1.09,0.01,">1 nonsynonymous","F62S P96N K132Y",3
"lib2","SARS-CoV-2","GAGGACTGAAGGAGTG",11,67.31,6.28,-4.56,0.86,1.5,1.36,0.02,">1 nonsynonymous","G86R D98I K128P R136C S164Y H189N",6
"lib2","SARS-CoV-2","GAGGACTGAGAATTGA",3,45.29,10.82,-0.02,0.06,2.94,1.08,0,"1 nonsynonymous","T55S",1
"lib2","SARS-CoV-2","GAGGACTGGACTAGTA",2,6.16,7.73,-3.11,0.27,1.5,1.04,0.02,">1 nonsynonymous","G9V T55L N92S T100L T148C",5
"lib2","SARS-CoV-2","GAGGACTTATCACCAT",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y C61A Y119N P149S",4
"lib2","SARS-CoV-2","GAGGACTTTTCAAACA",4,108.4,10.76,-0.07,0.04,2.91,1.11,0,"1 nonsynonymous","P149H",1
"lib2","SARS-CoV-2","GAGGAGAATAATATGA",6,0.03,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GAGGAGACATGCTATC",4,85.47,10.81,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","GAGGAGACGACTACTT",7,0.45,NA,NA,NA,NA,NA,NA,"stop","Q84L E135R S147Y T201*",4
"lib2","SARS-CoV-2","GAGGAGCATAAAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","L95V I104L N110K L131S T170*",5
"lib2","SARS-CoV-2","GAGGAGCCGGATGAAT",3,23.86,6.99,-3.85,0.44,1.5,1.24,0.03,">1 nonsynonymous","L5H D90S P161D",3
"lib2","SARS-CoV-2","GAGGAGCGCGCTACTG",1,32.74,10.84,0,0.07,2.93,1.1,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","GAGGAGGAGCACTACC",1,67.28,9.44,-1.4,0.06,2.71,1.13,0,"1 nonsynonymous","N118I",1
"lib2","SARS-CoV-2","GAGGAGGCTTAACTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T D112K S139Y G172C",4
"lib2","SARS-CoV-2","GAGGAGGTAGAACCTC",5,105.75,9.44,-1.4,0.08,1.83,1.09,0,">1 nonsynonymous","D34S N40I",2
"lib2","SARS-CoV-2","GAGGAGTATGCAACAT",4,22.56,10.69,-0.15,0.12,2.86,1.05,0.01,">1 nonsynonymous","S41F K132F",2
"lib2","SARS-CoV-2","GAGGAGTGGAAACCTT",2,65.09,10.4,-0.43,0.06,3,1.03,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","GAGGAGTTCAGGGAGG",7,54.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K26A I88Q T170A Y178C",4
"lib2","SARS-CoV-2","GAGGATAAAGAAGCGG",13,88,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G9N R16D E135I C158K",4
"lib2","SARS-CoV-2","GAGGATAGTATACTAA",9,164.12,9.06,-1.77,0.16,1.57,1.12,0.01,">1 nonsynonymous","S69L H189F",2
"lib2","SARS-CoV-2","GAGGATATATTCCAGA",2,34.68,10.23,-0.61,0.07,2.91,1.04,0,">1 nonsynonymous","L57T K128E",2
"lib2","SARS-CoV-2","GAGGATATGATTTAAG",2,19.9,9.35,-1.49,0.26,1.68,1.03,0.03,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GAGGATATGGCACATA",3,30.68,6,-4.84,2,2.26,1.16,0,">1 nonsynonymous","L5S E10T D90N N130T S139P",5
"lib2","SARS-CoV-2","GAGGATCAACCAACAA",2,44.33,10.43,-0.4,0.07,2.81,1.13,0,">1 nonsynonymous","N1E F44T",2
"lib2","SARS-CoV-2","GAGGATCAGCAATGAA",6,75.54,9.37,-1.46,0.12,2.1,1.05,0.01,">1 nonsynonymous","A42M L122P E154L P197M",4
"lib2","SARS-CoV-2","GAGGATCGCATAGCCG",9,85.75,6.13,-4.71,0.74,1.5,1.22,0.01,">1 nonsynonymous","A42E G51Y L183V",3
"lib2","SARS-CoV-2","GAGGATCTTGGCCGAA",2,37.82,6.19,-4.64,0.7,2,1.42,0.02,">1 nonsynonymous","V11R L131A T148L",3
"lib2","SARS-CoV-2","GAGGATGAGACGATAC",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84I S147V",2
"lib2","SARS-CoV-2","GAGGATGAGTATAGCC",8,98.1,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","F167E G174N",2
"lib2","SARS-CoV-2","GAGGATGATTGATTCC",6,16.33,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","V71Y",1
"lib2","SARS-CoV-2","GAGGATGCTGAACAAT",10,277.76,9.85,-0.99,0.05,2.41,1.03,0,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","GAGGATGCTTAAGACA",6,21.62,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","F99S G155R V173L",3
"lib2","SARS-CoV-2","GAGGATGTAAGCCGAG",9,133.16,8.75,-2.08,0.06,2.72,1.12,0,">1 nonsynonymous","L38F E141R E154F",3
"lib2","SARS-CoV-2","GAGGATGTACATTTGA",5,40.55,6.29,-4.55,0.39,1.5,1.11,0.02,">1 nonsynonymous","N40Y A105L",2
"lib2","SARS-CoV-2","GAGGATTACAAATATC",5,10.3,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S69R L183T",2
"lib2","SARS-CoV-2","GAGGATTAGAACAGTT",8,64.35,6,-4.84,2,3,1.2,0,">1 nonsynonymous","Q79A K114D R127L F156L",4
"lib2","SARS-CoV-2","GAGGATTAGGGAGTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T55* C61A S69N",3
"lib2","SARS-CoV-2","GAGGATTCATAATATT",2,52.55,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","A33K T63W Y119C Y143L",4
"lib2","SARS-CoV-2","GAGGATTGACGATTCC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","R16T S41L T46V P177*",4
"lib2","SARS-CoV-2","GAGGATTGACTGATAC",9,50.48,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6S V20W V37P I88R",4
"lib2","SARS-CoV-2","GAGGATTGTCCTGAGC",5,71.43,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14L D68R",2
"lib2","SARS-CoV-2","GAGGATTGTTGAACTG",2,29.45,6.74,-4.09,0.29,1.5,1.22,0.01,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","GAGGATTGTTGGCGAC",3,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T P54T A67V V71H N107Q L122H",6
"lib2","SARS-CoV-2","GAGGATTTCGAAACAT",3,83.84,10.77,-0.06,0.04,2.86,1.15,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","GAGGCAAACAAATTAG",6,375.56,10.17,-0.66,0.07,2.45,1.01,0,">1 nonsynonymous","L95V W106R P197S",3
"lib2","SARS-CoV-2","GAGGCAATCCCCCCAA",4,108.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Q84F L122V G146Q C158P A192E",5
"lib2","SARS-CoV-2","GAGGCAATTCAATCGA",7,1.24,NA,NA,NA,NA,NA,NA,"stop","R25* C61S K132P Q176L",4
"lib2","SARS-CoV-2","GAGGCACAAATCAGTA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","A22E A67V L95* T100*",4
"lib2","SARS-CoV-2","GAGGCACAATTATCTT",12,196.39,10.04,-0.8,0.05,2.59,1.04,0,">1 nonsynonymous","N13D A42T T46D",3
"lib2","SARS-CoV-2","GAGGCACCCTTTAGGC",2,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L G101Q K114T F167L",4
"lib2","SARS-CoV-2","GAGGCACCGCCAAGCT",5,70.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2N Y119E C150S",3
"lib2","SARS-CoV-2","GAGGCACGACTGTAAA",1,20.41,9.89,-0.95,0.13,2.27,1.08,0.01,">1 nonsynonymous","C6L T15G",2
"lib2","SARS-CoV-2","GAGGCAGACATAACAC",3,24.11,9.12,-1.71,0.08,2.95,1.03,0,">1 nonsynonymous","P54Y T170L",2
"lib2","SARS-CoV-2","GAGGCAGCGATGAGGA",5,28.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S I72D G86M G155H",4
"lib2","SARS-CoV-2","GAGGCAGGTGCCTCCT",1,52.79,9.7,-1.14,0.06,2.8,1.08,0,">1 nonsynonymous","T55V N118V",2
"lib2","SARS-CoV-2","GAGGCATATCCTGATC",5,132.87,8.61,-2.22,0.1,2.94,1.13,0,">1 nonsynonymous","G117S G174L",2
"lib2","SARS-CoV-2","GAGGCATTTATTCAAT",17,225.14,10.84,0,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGGCCAATCATTCCC",1,26.58,10.75,-0.09,0.03,2.98,1.03,0,"1 nonsynonymous","R78V",1
"lib2","SARS-CoV-2","GAGGCCACTAAAAAAT",6,62.3,6.36,-4.47,0.42,1.93,1.21,0.01,">1 nonsynonymous","L5P V20M S53F V103I G174S",5
"lib2","SARS-CoV-2","GAGGCCAGATACACTC",6,157.17,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S113D F167E",2
"lib2","SARS-CoV-2","GAGGCCAGGGATTTAA",2,6.91,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G83I A105T N157F",3
"lib2","SARS-CoV-2","GAGGCCATGGATCCAA",3,85.97,8.63,-2.2,0.1,2.42,1.12,0,">1 nonsynonymous","I2T S113W",2
"lib2","SARS-CoV-2","GAGGCCATTACGTGGT",5,54.18,10.07,-0.77,0.04,2.9,1.02,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","GAGGCCCCCTCGCGCG",2,16.43,6.47,-4.37,0.47,1.5,1.06,0.03,">1 nonsynonymous","R25H Y93A D97G S129V",4
"lib2","SARS-CoV-2","GAGGCCGAACAAATGC",2,18.4,9.5,-1.34,0.11,2.43,1.03,0.01,">1 nonsynonymous","G9L D97Q N120Y G174M",4
"lib2","SARS-CoV-2","GAGGCCGCGCCTTCCA",2,48.19,10.69,-0.15,0.11,2.89,1.04,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","GAGGCCGGCTCAAAGG",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K A89H Y123E P149N G152F L183V",6
"lib2","SARS-CoV-2","GAGGCCGGGACGCCGC",7,47.96,9.55,-1.28,0.16,1.8,1.11,0.01,">1 nonsynonymous","D90M P133K",2
"lib2","SARS-CoV-2","GAGGCCGTTAAGCTGT",13,6.91,NA,NA,NA,NA,NA,NA,"stop","N1R P149K Q176*",3
"lib2","SARS-CoV-2","GAGGCCTGTAAGGACG",3,55.91,10.48,-0.36,0.05,2.92,1.03,0,">1 nonsynonymous","S53A F62K",2
"lib2","SARS-CoV-2","GAGGCGAACATTCAAT",2,42.89,10.12,-0.71,0.08,2.5,1.05,0,">1 nonsynonymous","N4H S69C",2
"lib2","SARS-CoV-2","GAGGCGACAAGCAAAA",12,225.71,9,-1.83,0.05,2.65,1.11,0,">1 nonsynonymous","N24L V153K G166V",3
"lib2","SARS-CoV-2","GAGGCGAGATCGAGAC",1,22.3,6,-4.84,2,3,1.12,0.02,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","GAGGCGATAGTTCACC",15,104.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44T K114S L125I F134P Q168A",5
"lib2","SARS-CoV-2","GAGGCGATTGAGGACT",1,47.6,9.76,-1.07,0.05,2.8,1.03,0,">1 nonsynonymous","G146S G155Y",2
"lib2","SARS-CoV-2","GAGGCGATTGATTGCA",5,24.16,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","T15S L57P I88N P96M",4
"lib2","SARS-CoV-2","GAGGCGCATCACCAAA",12,69.94,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I88D E141T",2
"lib2","SARS-CoV-2","GAGGCGCTAAAAATGA",2,71.93,9.64,-1.2,0.09,2.09,1.02,0,">1 nonsynonymous","E10R L57S T63N D98N",4
"lib2","SARS-CoV-2","GAGGCGGAGAAGATTT",10,67.66,9.27,-1.56,0.07,1.77,1.06,0,">1 nonsynonymous","G9A S41K S69G",3
"lib2","SARS-CoV-2","GAGGCGGAGATATAGC",7,19.35,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","R136V L183R",2
"lib2","SARS-CoV-2","GAGGCGGATGGGATCC",2,56.89,10.87,0.04,0.06,2.86,1.11,0,">1 nonsynonymous","R16T T55G S200R",3
"lib2","SARS-CoV-2","GAGGCGGGCAAAGTCA",1,25.63,10.87,0.03,0.06,2.87,1.13,0,"1 nonsynonymous","K199M",1
"lib2","SARS-CoV-2","GAGGCGTATAAATCCC",10,89.84,6,-4.84,2,1.5,1.3,0.01,">1 nonsynonymous","E10P L95S",2
"lib2","SARS-CoV-2","GAGGCGTCCAAGATCT",2,59.5,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12R G51D A81T",3
"lib2","SARS-CoV-2","GAGGCGTGAATAAACT",5,98.89,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7F S36M C102T W106E T140L P149T K198Q",7
"lib2","SARS-CoV-2","GAGGCGTTCTTATGAT",4,57.56,10.72,-0.11,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGGCTAACGAGAAAA",2,10.72,6,-4.84,2,3,1.1,0.02,">1 nonsynonymous","R16M A18G C61N C150T",4
"lib2","SARS-CoV-2","GAGGCTATACAATCGA",2,59.1,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","W23R N110L C158F Q176P",4
"lib2","SARS-CoV-2","GAGGCTATCGCCTCAA",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F L122I Y165E",3
"lib2","SARS-CoV-2","GAGGCTCAACCGACTA",5,58.19,10.83,-0.01,0.06,2.8,1.18,0,"1 nonsynonymous","K56H",1
"lib2","SARS-CoV-2","GAGGCTCCAGAAGAGT",18,2.2,NA,NA,NA,NA,NA,NA,"stop","A14* T46G N151E F167M E186N",5
"lib2","SARS-CoV-2","GAGGCTCTAGTTACCC",9,174.63,10.77,-0.07,0.04,2.89,1.12,0,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","GAGGCTGATAAAACCT",13,177.09,9.96,-0.87,0.07,2.5,1.04,0,">1 nonsynonymous","D34A G152Q",2
"lib2","SARS-CoV-2","GAGGCTGATTCGAATA",8,82.88,10.83,-0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGGCTGTCCTCTCTA",9,60.62,6.24,-4.6,0.79,1.5,1.23,0.02,">1 nonsynonymous","I104M N157Y T170P",3
"lib2","SARS-CoV-2","GAGGCTTCTATATCCT",4,7.18,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","GAGGCTTTGCGCGGGT",3,35.01,9.74,-1.1,0.14,1.98,1.15,0.01,">1 nonsynonymous","T55V P96Q",2
"lib2","SARS-CoV-2","GAGGGAAACTGCTTGT",7,40.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1T D59S N64D V77G A81S G166I T201L",7
"lib2","SARS-CoV-2","GAGGGAACAGAATCTT",13,82.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12Y L57W P96Q",3
"lib2","SARS-CoV-2","GAGGGAACCTTACGTT",2,0.62,NA,NA,NA,NA,NA,NA,"stop","Y121* N157S P197T",3
"lib2","SARS-CoV-2","GAGGGAACGAAGAAAG",6,2.87,NA,NA,NA,NA,NA,NA,"stop","I2P F44E P82* Y93R L122T",5
"lib2","SARS-CoV-2","GAGGGAAGGGGTTAAG",1,21.74,10.75,-0.08,0.03,3,1.01,0,">1 nonsynonymous","K56V P149T",2
"lib2","SARS-CoV-2","GAGGGACTAGGAGACA",1,35.6,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I88F Y159C G196W T201S",4
"lib2","SARS-CoV-2","GAGGGACTGGCGGAAT",11,111.72,10.04,-0.79,0.05,2.74,1.03,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","GAGGGAGATGAGGCTA",3,42.56,10.38,-0.46,0.05,2.9,1.07,0,">1 nonsynonymous","I28M S41L S129W N151S",4
"lib2","SARS-CoV-2","GAGGGAGCTCCTTATT",13,30.54,6.38,-4.46,0.39,1.5,1.1,0.01,">1 nonsynonymous","K56C Y121M L183D",3
"lib2","SARS-CoV-2","GAGGGAGGAAGTCAGG",5,48.91,9.62,-1.21,0.08,2.01,1.05,0,">1 nonsynonymous","P54M W106K P149S G155S",4
"lib2","SARS-CoV-2","GAGGGATTTGCCAACA",8,168.28,9.07,-1.77,0.07,2.27,1.1,0,">1 nonsynonymous","S19A S36R E154H",3
"lib2","SARS-CoV-2","GAGGGCAATATTTGGA",1,6.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T100S N120T",3
"lib2","SARS-CoV-2","GAGGGCACAGGAAAAA",2,10.34,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F12T S36W C102L P169I",4
"lib2","SARS-CoV-2","GAGGGCACATTTATAA",3,45.52,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I28H N64L P161Q V182L",4
"lib2","SARS-CoV-2","GAGGGCCCTCTAGTTA",1,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K S108V T148F",3
"lib2","SARS-CoV-2","GAGGGCCTGTAAGCCT",1,23.79,10.72,-0.12,0.05,2.93,1.08,0,">1 nonsynonymous","N1M T140K",2
"lib2","SARS-CoV-2","GAGGGCCTTATTTCAC",3,35.77,8.39,-2.45,0.16,1.61,1.11,0.01,">1 nonsynonymous","C6V N58Y E141C",3
"lib2","SARS-CoV-2","GAGGGCGTATGATATA",13,6.74,NA,NA,NA,NA,NA,NA,"stop","C61D G83M P133* Q144F V180E",5
"lib2","SARS-CoV-2","GAGGGCTATTAGAAAA",4,41.35,10.57,-0.26,0.04,2.98,1,0,">1 nonsynonymous","A33L T100N K128N",3
"lib2","SARS-CoV-2","GAGGGCTCCTGTACGT",1,19.23,10.56,-0.27,0.09,2.85,1.16,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","GAGGGGAACGATAAAA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","C61* F99W",2
"lib2","SARS-CoV-2","GAGGGGACGCACCCAG",3,46.72,8.98,-1.86,0.04,2.93,1.06,0,">1 nonsynonymous","I142S P149S",2
"lib2","SARS-CoV-2","GAGGGGATTAATATCA",8,106.33,10,-0.84,0.07,2.72,1.07,0,">1 nonsynonymous","D90M G116L",2
"lib2","SARS-CoV-2","GAGGGGCCATACATGA",5,6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D R73S D90L N107G T170L Y175H A190P",7
"lib2","SARS-CoV-2","GAGGGGCCCCTGCAGT",2,17.14,10.12,-0.72,0.08,2.81,1.04,0.01,">1 nonsynonymous","D59A D90S N120V",3
"lib2","SARS-CoV-2","GAGGGGCTACAAAAAT",10,81.17,10.8,-0.04,0.04,2.86,1.12,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","GAGGGGGAAAGCGCTG",7,165.16,8.46,-2.37,0.11,2.87,1.09,0,"1 nonsynonymous","Y175C",1
"lib2","SARS-CoV-2","GAGGGGTACAGTCCAA",4,47.27,10.25,-0.59,0.03,2.73,1.06,0,">1 nonsynonymous","W106M K128S",2
"lib2","SARS-CoV-2","GAGGGTAATGCAAATG",2,8.77,10.49,-0.35,0.12,2.96,1,0,">1 nonsynonymous","A81Q I138V F156V",3
"lib2","SARS-CoV-2","GAGGGTACCCTCTCGG",5,18.78,6.11,-4.73,0.49,1.5,1.1,0.01,">1 nonsynonymous","T15A L162S",2
"lib2","SARS-CoV-2","GAGGGTACCTATAATC",1,23.85,10.09,-0.74,0.03,3,1,0,">1 nonsynonymous","K48M G174T",2
"lib2","SARS-CoV-2","GAGGGTACTAGAACTA",7,100.18,10.77,-0.07,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGGGTATACCCATTA",1,10.46,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","K56P N64K V71G F160N T201C",5
"lib2","SARS-CoV-2","GAGGGTCCGGAGTCAC",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V F47S G86V",3
"lib2","SARS-CoV-2","GAGGGTCCTTATGTTC",1,24.02,9.45,-1.39,0.05,2.94,1.02,0,">1 nonsynonymous","G116R F156T",2
"lib2","SARS-CoV-2","GAGGGTGAGGGTACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9T K56Q P149*",3
"lib2","SARS-CoV-2","GAGGGTGTACTGTGAT",4,20.89,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","K26T G101R T201I",3
"lib2","SARS-CoV-2","GAGGGTTACGTGTATG",2,0.44,NA,NA,NA,NA,NA,NA,"stop","R27A V52C Y93L N110* N120T K128L C150W V180L",8
"lib2","SARS-CoV-2","GAGGGTTATATATCCA",6,21.67,6.23,-4.6,0.53,1.5,1.13,0.01,">1 nonsynonymous","N4R F62S F99T A105E I142S",5
"lib2","SARS-CoV-2","GAGGGTTATCAATACT",6,66.67,9.51,-1.33,0.1,2.24,1.06,0,">1 nonsynonymous","L57F K114E S139H",3
"lib2","SARS-CoV-2","GAGGGTTCTAGTACCA",4,117.2,10.8,-0.03,0.07,2.91,1.09,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","GAGGGTTTTAGGTATT",6,53.21,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51W G101C A105S L122S",4
"lib2","SARS-CoV-2","GAGGTAAAAACAGCAC",14,140.06,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C49F L60P D98K R136S Y178H",5
"lib2","SARS-CoV-2","GAGGTAAAACCTATTT",1,15.69,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","A14Y C49Q F62V V103W I142S",5
"lib2","SARS-CoV-2","GAGGTAAAATCCCGTA",8,35.62,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V103S N109M G174K",3
"lib2","SARS-CoV-2","GAGGTAAAGTGCATGC",7,1.52,NA,NA,NA,NA,NA,NA,"stop","Y35P K48L C61* D97Q S164F",5
"lib2","SARS-CoV-2","GAGGTAACACGACGTT",17,222.91,10.26,-0.57,0.06,2.59,1.02,0,">1 nonsynonymous","N13F D34N L38I",3
"lib2","SARS-CoV-2","GAGGTAAGACCGAAAC",1,17.87,10.8,-0.03,0.03,2.92,1.09,0,">1 nonsynonymous","S53F C61S N110K L122S T148S",5
"lib2","SARS-CoV-2","GAGGTAAGTCAATATG",2,12.48,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V77K Y143M E154L",3
"lib2","SARS-CoV-2","GAGGTAATTCTCTAGG",7,55.67,10.89,0.05,0.08,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGGTACACAAAATTG",2,37.43,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A18R R25P I142L",3
"lib2","SARS-CoV-2","GAGGTACCATACTATT",9,0.3,NA,NA,NA,NA,NA,NA,"stop","I72M I88*",2
"lib2","SARS-CoV-2","GAGGTACGGAGACCGC",9,184.81,10.65,-0.18,0.05,2.94,1.03,0,">1 nonsynonymous","I2P G9M Y39P",3
"lib2","SARS-CoV-2","GAGGTACGGAGGTTTC",6,0.6,NA,NA,NA,NA,NA,NA,"stop","S36G S41E Y50* T55R P96L N107M",6
"lib2","SARS-CoV-2","GAGGTACTGAGGTGAG",2,22.65,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N58R I104W K114L F167A R179E T201M",6
"lib2","SARS-CoV-2","GAGGTAGACTTTAAGC",8,130.75,10.78,-0.06,0.03,2.9,1.1,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","GAGGTATAACGCCACA",3,59.1,6,-4.84,2,3,1.24,0,"1 nonsynonymous","G172W",1
"lib2","SARS-CoV-2","GAGGTATGTTACACAT",8,13.54,7.46,-3.37,0.44,1.5,1.17,0.05,">1 nonsynonymous","N13Y A42P L60A P96S N130L",5
"lib2","SARS-CoV-2","GAGGTATTCAATCAAA",6,57.12,8.22,-2.62,0.2,1.5,1.17,0.02,">1 nonsynonymous","N58V E76F",2
"lib2","SARS-CoV-2","GAGGTCAAACTGCAGC",8,34.29,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y35Q A42E F62I I104N S139C",5
"lib2","SARS-CoV-2","GAGGTCAACTAATTCT",1,45.11,9.94,-0.9,0.09,2.39,1.02,0,">1 nonsynonymous","C49I D98N",2
"lib2","SARS-CoV-2","GAGGTCAACTACGAAA",1,6.89,7.41,-3.43,0.25,2.09,1.07,0.02,">1 nonsynonymous","D90N D97Q S113V",3
"lib2","SARS-CoV-2","GAGGTCAATTATCGAT",9,1.21,NA,NA,NA,NA,NA,NA,"stop","I2H N40* G86* P96Q G116V",5
"lib2","SARS-CoV-2","GAGGTCAATTTCAAGC",2,68.47,9.48,-1.35,0.05,2.97,1.01,0,">1 nonsynonymous","Y119K K128A E154I",3
"lib2","SARS-CoV-2","GAGGTCATGCTATTTC",11,114.97,9.16,-1.68,0.07,1.89,1.07,0,">1 nonsynonymous","C61H E135L P149T",3
"lib2","SARS-CoV-2","GAGGTCCACGGTTATC",4,14.43,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","S29K N40Y N64F G86R",4
"lib2","SARS-CoV-2","GAGGTCCATATTCGGA",6,0.79,NA,NA,NA,NA,NA,NA,"stop","I2S N64S F70I C150*",4
"lib2","SARS-CoV-2","GAGGTCCCCACGTAGC",3,46.59,6.34,-4.49,0.62,1.5,1.19,0.02,">1 nonsynonymous","C6S D34I A105T S113G L122W",5
"lib2","SARS-CoV-2","GAGGTCCCTACCGTGC",1,3.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","GAGGTCCTGGCGCGAC",4,3.31,NA,NA,NA,NA,NA,NA,"stop","N4* Y91* I138V L188P",4
"lib2","SARS-CoV-2","GAGGTCGACCAATAAA",5,38.6,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31T V37R A42V Y91Q D112S F160T",6
"lib2","SARS-CoV-2","GAGGTCGACGAAGTCA",15,91.16,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L60H G86R G174T",3
"lib2","SARS-CoV-2","GAGGTCGATAGAAAAT",3,28.78,8.87,-1.97,0.09,2.73,1.05,0,">1 nonsynonymous","S113T F134N",2
"lib2","SARS-CoV-2","GAGGTCGCTACCGAGG",2,60.01,10.37,-0.46,0.05,2.85,1.1,0,">1 nonsynonymous","L5S P96S",2
"lib2","SARS-CoV-2","GAGGTCGTAAAGTTTC",2,92.1,10.8,-0.04,0.05,2.89,1.09,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","GAGGTCTAGGCTCAGG",6,95.94,10.84,0,0.04,2.91,1.09,0,">1 nonsynonymous","A33F D59S",2
"lib2","SARS-CoV-2","GAGGTGAAGTGCCGAA",8,262.4,10.37,-0.46,0.04,2.75,1.09,0,">1 nonsynonymous","S69W Y175W",2
"lib2","SARS-CoV-2","GAGGTGACCGCAAAAA",14,108.59,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S69H A81Y W106F",3
"lib2","SARS-CoV-2","GAGGTGAGACACAAAC",3,25.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107K C158I",2
"lib2","SARS-CoV-2","GAGGTGAGACAGGCCA",5,18.53,6.98,-3.85,0.37,1.5,1.06,0.05,">1 nonsynonymous","R25Q D90F L111Q",3
"lib2","SARS-CoV-2","GAGGTGAGGTACATTG",6,42.36,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","K26C G101A S164L",3
"lib2","SARS-CoV-2","GAGGTGCAAGGTATCC",9,122.76,10.87,0.03,0.05,2.92,1.1,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","GAGGTGCACGGTAAGG",6,76.68,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C61H A81V N107W",3
"lib2","SARS-CoV-2","GAGGTGGACCACGATC",2,28.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G9A V103F E135F T148V",4
"lib2","SARS-CoV-2","GAGGTGGCGCGAAATA",7,83.63,6,-4.84,1.75,1.5,1.09,0,">1 nonsynonymous","N1L S29D G86T E141K S164L",5
"lib2","SARS-CoV-2","GAGGTGGTCGATGCAT",7,180.25,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K56L A89Q G117T",3
"lib2","SARS-CoV-2","GAGGTGTAACTCATCG",11,124.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44E G146K T170R",3
"lib2","SARS-CoV-2","GAGGTGTCAGAGATGA",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G V37L N157M",3
"lib2","SARS-CoV-2","GAGGTGTCCTCTCAAG",4,27.39,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","S45H Y93G T100E I104S",4
"lib2","SARS-CoV-2","GAGGTGTGCAACACTT",4,58.7,8.71,-2.12,0.41,1.5,1.09,0.06,">1 nonsynonymous","W23S N40P T170K",3
"lib2","SARS-CoV-2","GAGGTGTGTACTGTAA",4,34.33,8.95,-1.88,0.09,2.11,1.07,0,">1 nonsynonymous","E10N G146F",2
"lib2","SARS-CoV-2","GAGGTTAATTACTCCA",9,33.69,9.62,-1.21,0.12,2.24,1,0.01,">1 nonsynonymous","Y35A D90L N151M",3
"lib2","SARS-CoV-2","GAGGTTACACTTACTG",7,135.47,10.17,-0.66,0.06,2.72,1.04,0,">1 nonsynonymous","V37L D90G S129A",3
"lib2","SARS-CoV-2","GAGGTTAGCCTCAATC",7,176.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N4C D59S D98L S139R G146T",5
"lib2","SARS-CoV-2","GAGGTTAGTCAGAGTG",2,17.48,6.86,-3.98,0.58,1.5,1.15,0.03,">1 nonsynonymous","N1E Y91R C158P V173F",4
"lib2","SARS-CoV-2","GAGGTTATCGATGAGT",14,3.8,NA,NA,NA,NA,NA,NA,"stop","F44Y D68R K114* P133Q G152K",5
"lib2","SARS-CoV-2","GAGGTTCAAAAATAAT",1,21.13,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K48T L95A",2
"lib2","SARS-CoV-2","GAGGTTCAAATATATA",2,92.72,10.75,-0.08,0.03,2.96,1.05,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","GAGGTTCACCCATATT",10,109.68,10.56,-0.27,0.04,2.86,1.06,0,">1 nonsynonymous","N120L Q163R",2
"lib2","SARS-CoV-2","GAGGTTCCACGACGCG",4,34.98,7.46,-3.38,0.14,1.5,1.05,0.01,">1 nonsynonymous","A105S Y143D",2
"lib2","SARS-CoV-2","GAGGTTGAATAGACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","E10R D90Y A105G F185*",4
"lib2","SARS-CoV-2","GAGGTTGGAGTGTGAA",5,11.59,NA,NA,NA,NA,NA,NA,"stop","G83*",1
"lib2","SARS-CoV-2","GAGGTTGGTATCGAGA",10,98.69,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","A14D C150I",2
"lib2","SARS-CoV-2","GAGGTTTGTTATGAAA",4,29.54,9.49,-1.35,0.12,2.28,1.02,0.01,">1 nonsynonymous","K56H A105Y G152S",3
"lib2","SARS-CoV-2","GAGGTTTTAAAGTTCT",2,32.17,10.56,-0.27,0.16,2.71,1.04,0.01,">1 nonsynonymous","E10R T46Q",2
"lib2","SARS-CoV-2","GAGGTTTTACAACCGG",3,73.36,10.02,-0.81,0.04,2.8,1.08,0,">1 nonsynonymous","V11Y V37D S200Q",3
"lib2","SARS-CoV-2","GAGTAAAAAAATCAGC",1,21.93,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L95G Y123G P133V T140N Y178S",5
"lib2","SARS-CoV-2","GAGTAAAAAATGGCGT",1,8.94,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","N58Y N130I Y165L",3
"lib2","SARS-CoV-2","GAGTAAAAAATTGGCT",3,94.27,10.81,-0.03,0.03,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTAAAAGATCAAGA",8,76.16,8.57,-2.27,0.35,1.5,1.04,0.05,">1 nonsynonymous","I88K D112T E135T G152F Y175N",5
"lib2","SARS-CoV-2","GAGTAAACCAAAACAC",10,130.51,9.74,-1.09,0.06,1.95,1.09,0,"1 nonsynonymous","F8N",1
"lib2","SARS-CoV-2","GAGTAAAGAATTCACT",2,118.56,10.63,-0.21,0.03,2.96,1.05,0,">1 nonsynonymous","T140I P149S",2
"lib2","SARS-CoV-2","GAGTAAAGTCAAGTAC",1,11.87,10.72,-0.11,0.06,2.72,1.3,0,">1 nonsynonymous","K199N T201I",2
"lib2","SARS-CoV-2","GAGTAAATAACACAAC",5,102.19,8.96,-1.87,0.09,2.89,1.12,0,">1 nonsynonymous","T63C N157G",2
"lib2","SARS-CoV-2","GAGTAAATAAGCATAT",13,98.91,6,-4.84,2,1.52,1.23,0.01,">1 nonsynonymous","T3L V37L A89L W106M T170R",5
"lib2","SARS-CoV-2","GAGTAAATATCCAACA",1,27.22,10.81,-0.03,0.08,2.87,1.15,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","GAGTAAATCTAGACTA",5,126.62,10.34,-0.49,0.03,2.9,1.08,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","GAGTAAATTGAACACA",1,31.93,10.84,0.01,0.07,3,1.03,0,"1 nonsynonymous","I2E",1
"lib2","SARS-CoV-2","GAGTAAATTGGTATTC",5,71.41,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","N92L F99C N107R",3
"lib2","SARS-CoV-2","GAGTAACAAAACGTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R D68E F99M I104S",4
"lib2","SARS-CoV-2","GAGTAACACAACATGG",14,65.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10L F99N",2
"lib2","SARS-CoV-2","GAGTAACCCCGATACT",10,46.57,7.5,-3.33,0.24,1.5,1.06,0.02,">1 nonsynonymous","I2Y L57K G83K D90S S139K",5
"lib2","SARS-CoV-2","GAGTAACCCTACTAGT",5,63.69,10.8,-0.04,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTAACGAAGCCCAG",2,12.77,10.66,-0.18,0.12,2.95,1.1,0.01,">1 nonsynonymous","T15S L95M",2
"lib2","SARS-CoV-2","GAGTAAGAAGGATTAA",20,4.98,NA,NA,NA,NA,NA,NA,"stop","N4I F99* N110V I138Q",4
"lib2","SARS-CoV-2","GAGTAAGAGAGAGAGG",1,17.21,6.26,-4.58,0.26,1.77,1.08,0,">1 nonsynonymous","I88K K114N",2
"lib2","SARS-CoV-2","GAGTAAGATAAACCCG",5,20.2,10.55,-0.28,0.08,2.94,1.05,0,">1 nonsynonymous","A14L T55H D90N L122S",4
"lib2","SARS-CoV-2","GAGTAAGTTTCATTAA",13,114.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G83C G101F R124G G152M K198R",5
"lib2","SARS-CoV-2","GAGTAATAAAAACCGA",9,172.78,8.11,-2.72,0.07,1.61,1.1,0,">1 nonsynonymous","I2V L38V T100S N118R",4
"lib2","SARS-CoV-2","GAGTAATAAACATTGA",9,104.12,10.84,0,0.06,2.93,1.09,0,">1 nonsynonymous","G9S K132T",2
"lib2","SARS-CoV-2","GAGTAATAACATTACG",5,72.17,10.61,-0.23,0.04,3,1.03,0,">1 nonsynonymous","N4K S41A D90S L122M",4
"lib2","SARS-CoV-2","GAGTAATAACCACTTT",4,50.1,10.76,-0.08,0.06,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGTAATAATGCAACA",12,320.48,10.72,-0.12,0.02,2.9,1.09,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","GAGTAATATAATATCC",5,290.49,10.19,-0.64,0.04,2.81,1.01,0,">1 nonsynonymous","Y35I K132Y G146S G152S",4
"lib2","SARS-CoV-2","GAGTAATATACACTTT",13,199.24,9.82,-1.01,0.05,2.68,1.06,0,">1 nonsynonymous","C61W R78A D90Y",3
"lib2","SARS-CoV-2","GAGTAATCATGAACTG",2,11.48,6,-4.84,2,1.5,1.13,0.08,">1 nonsynonymous","N107V G146V",2
"lib2","SARS-CoV-2","GAGTAATCCATTAGCA",1,67.79,10.91,0.08,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTAATCGATAGTAA",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K V103C Y175R",3
"lib2","SARS-CoV-2","GAGTAATGTACTCGGC",6,62.53,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y119P V173R V180W",3
"lib2","SARS-CoV-2","GAGTAATGTTCTCACG",2,9.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97M T201P",2
"lib2","SARS-CoV-2","GAGTAATTAGACGTTA",4,116,10.53,-0.3,0.04,2.94,1.05,0,"1 nonsynonymous","Y178C",1
"lib2","SARS-CoV-2","GAGTAATTCGCGCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V32M K198* T201V",3
"lib2","SARS-CoV-2","GAGTAATTTCCCTGTA",2,14.94,8.87,-1.97,0.22,1.91,1.15,0.03,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","GAGTAATTTCGTAACC",3,9.5,6.37,-4.47,0.37,3,1.14,0.01,"1 nonsynonymous","L183E",1
"lib2","SARS-CoV-2","GAGTACAACAAAGCTA",6,43.84,10.82,-0.02,0.05,2.97,1.07,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","GAGTACAACCCGAAGG",1,57.57,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N92I F156S",2
"lib2","SARS-CoV-2","GAGTACAATAATTGCG",10,132.67,10.77,-0.07,0.02,2.98,1.04,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","GAGTACAATATAACAG",7,11.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7S K94V S113Y E141S L162K",5
"lib2","SARS-CoV-2","GAGTACAATGCTGTTC",5,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M Y93F Q163H",3
"lib2","SARS-CoV-2","GAGTACACAAATTGCA",2,48.06,10.62,-0.21,0.04,2.98,1.02,0,">1 nonsynonymous","Y39S L60C T148E",3
"lib2","SARS-CoV-2","GAGTACACATAACGTA",8,81.42,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C49T D75W W106F",3
"lib2","SARS-CoV-2","GAGTACACATGCTTGC",1,17.63,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","GAGTACACCAACGAAG",6,59.38,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","K56T D112K",2
"lib2","SARS-CoV-2","GAGTACATTTTTCGCA",14,187.86,10.35,-0.48,0.04,2.86,1.08,0,">1 nonsynonymous","L60E K128Q Q144R",3
"lib2","SARS-CoV-2","GAGTACCAACTAAACG",4,16.76,10.65,-0.18,0.09,2.74,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTACCAGGGCAAAT",6,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120R G146A",2
"lib2","SARS-CoV-2","GAGTACCATTCAAGTA",1,21.63,10.29,-0.55,0.08,2.78,1.09,0,">1 nonsynonymous","T85G G152L",2
"lib2","SARS-CoV-2","GAGTACCATTGATTGA",1,38.66,10.75,-0.09,0.1,3,1.05,0,">1 nonsynonymous","D97E K198R",2
"lib2","SARS-CoV-2","GAGTACCCAACAGAAC",3,7.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A P96L P161R K199G",4
"lib2","SARS-CoV-2","GAGTACCCAGCGCCTA",3,16.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14L T15N N64T K128A F156T A190D",6
"lib2","SARS-CoV-2","GAGTACCGATTGAACA",3,38.67,8.85,-1.99,0.23,1.74,1.13,0.02,">1 nonsynonymous","V32W T85L P133Q",3
"lib2","SARS-CoV-2","GAGTACCTGATAGGCA",4,16.47,10.88,0.04,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTACGACTAGTTTT",4,123.82,10.78,-0.05,0.04,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGTACGAGAAACAAA",9,39.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91V P96C Y121A",3
"lib2","SARS-CoV-2","GAGTACGCGCGTTGCG",1,75.17,6.71,-4.13,0.11,1.68,1.07,0,">1 nonsynonymous","S41C Y143D Y175F",3
"lib2","SARS-CoV-2","GAGTACTCAGATGCAG",3,32.86,10.8,-0.04,0.06,2.99,1.01,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","GAGTACTGAAGGTAGG",2,22.2,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S43D A105K F126A E135C",4
"lib2","SARS-CoV-2","GAGTACTTATTCGTAA",4,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101H Q144H P149F",3
"lib2","SARS-CoV-2","GAGTAGAAGTTTCACT",1,33.52,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V11L D90M V103Q C150T G174R Q176S",6
"lib2","SARS-CoV-2","GAGTAGACACTCGCCT",5,12.55,6.65,-4.19,0.65,1.5,1.16,0.07,">1 nonsynonymous","V37C T55I C102W D112I F185R",5
"lib2","SARS-CoV-2","GAGTAGAGCTAAAAAC",2,8.53,7.8,-3.04,0.28,2.73,1.1,0.02,">1 nonsynonymous","Y39M C158R",2
"lib2","SARS-CoV-2","GAGTAGATAACTGAAA",4,57.44,9.63,-1.21,0.1,2.47,1.09,0,">1 nonsynonymous","V37Y N120V I138W F160N",4
"lib2","SARS-CoV-2","GAGTAGCAACTGAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* V32Q V103F D137Y",4
"lib2","SARS-CoV-2","GAGTAGCACACGCCTG",4,57.78,10.68,-0.16,0.05,2.92,1.04,0,">1 nonsynonymous","R27L N64D",2
"lib2","SARS-CoV-2","GAGTAGCACGTTCCCA",20,160.64,9.24,-1.59,0.1,1.75,1.12,0,">1 nonsynonymous","V37L L57N Y66N F185L",4
"lib2","SARS-CoV-2","GAGTAGCGGCGCAGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","GAGTAGGTCAAAGGGT",3,123.47,8.5,-2.34,0.13,2.38,1.05,0.01,">1 nonsynonymous","D34M Y39H Y119V",3
"lib2","SARS-CoV-2","GAGTAGTATTGACGCA",11,1.54,NA,NA,NA,NA,NA,NA,"stop","P54R L60M N107* N151S",4
"lib2","SARS-CoV-2","GAGTAGTCTGGGACCC",4,19.56,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F8K F62V I80M A105E Y119M V180S",6
"lib2","SARS-CoV-2","GAGTAGTCTTATGTGA",4,14.71,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N24R V37S I72N I104Y N157P",5
"lib2","SARS-CoV-2","GAGTAGTGAAAAGGTT",10,2.92,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","GAGTAGTTTTTCCCAA",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116R L131S",2
"lib2","SARS-CoV-2","GAGTATAAAATAACGT",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93M F156M",2
"lib2","SARS-CoV-2","GAGTATAAACGACACC",20,671.2,10.02,-0.82,0.03,2.95,1.03,0,">1 nonsynonymous","I104V F126V",2
"lib2","SARS-CoV-2","GAGTATAAATTCATCA",1,30.98,10.91,0.08,0.07,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGTATAAATTTCGTA",2,49.73,10.87,0.04,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTATAAGCCGAGCA",9,96.47,8.31,-2.52,0.13,1.53,1.11,0.01,">1 nonsynonymous","R27M K48Q G74W",3
"lib2","SARS-CoV-2","GAGTATAATATGAAAA",12,87.82,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Y35R L95E A105G N110R S129P",5
"lib2","SARS-CoV-2","GAGTATACCCTCATTG",10,126.76,10.81,-0.03,0.04,2.95,1.06,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","GAGTATACTTGTACAA",3,35.09,10.83,0,0.08,2.93,1.05,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","GAGTATATATATAAGG",10,6.73,NA,NA,NA,NA,NA,NA,"stop","D112* P133A S139V",3
"lib2","SARS-CoV-2","GAGTATATATTGTACA",9,58.46,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T85W Y91F R179L",3
"lib2","SARS-CoV-2","GAGTATATCGGAGGCT",3,13.19,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S43G K56Q A89Y D98M F134N Y143Q F156T",7
"lib2","SARS-CoV-2","GAGTATATGAAGCCAC",6,0.53,NA,NA,NA,NA,NA,NA,"stop","N4R Y50A P96H C158R Q168*",5
"lib2","SARS-CoV-2","GAGTATCATAAAAAGT",22,155.55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N30M S113Y L131K",3
"lib2","SARS-CoV-2","GAGTATCATAGGCTAT",4,2.81,NA,NA,NA,NA,NA,NA,"stop","N13E S19* Y39S S129D",4
"lib2","SARS-CoV-2","GAGTATCCACACCCGT",2,91.39,10.75,-0.08,0.07,2.86,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGTATCCATGTTCGC",2,27.47,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S29R Y93C G101S",3
"lib2","SARS-CoV-2","GAGTATCCCCTAGTCC",11,55.87,6.04,-4.79,0.7,1.5,1.13,0.01,">1 nonsynonymous","F17I C49L A145Q K199Y",4
"lib2","SARS-CoV-2","GAGTATCGACCAAAAT",1,29.79,10.6,-0.23,0.06,2.91,1.07,0,">1 nonsynonymous","N40T G116S",2
"lib2","SARS-CoV-2","GAGTATGATTTATACT",4,63.37,10.86,0.03,0.05,2.94,1.06,0,">1 nonsynonymous","V37L L60V N64A P197V",4
"lib2","SARS-CoV-2","GAGTATGCCTAACTAC",18,288.93,10.84,0,0.05,2.9,1.09,0,">1 nonsynonymous","N64Q P197S",2
"lib2","SARS-CoV-2","GAGTATGCGGCGCAAT",10,76.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120W R127L",2
"lib2","SARS-CoV-2","GAGTATGGCCCAAGTA",3,19.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A81I V103L",2
"lib2","SARS-CoV-2","GAGTATGTCTAAACGC",1,21.87,9.11,-1.72,0.19,2.17,1.07,0.01,">1 nonsynonymous","N40L F134N G155N",3
"lib2","SARS-CoV-2","GAGTATTCCATCCCTA",4,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77W L183R",2
"lib2","SARS-CoV-2","GAGTATTGCAAGATAA",3,2.74,NA,NA,NA,NA,NA,NA,"stop","G9C T46* P54T",3
"lib2","SARS-CoV-2","GAGTATTTATCCTATT",2,17.63,6,-4.84,2,1.5,1.37,0.08,">1 nonsynonymous","N4K G101S",2
"lib2","SARS-CoV-2","GAGTCAAAAAAACACT",5,74.16,9.04,-1.8,0.1,2.27,1.05,0,">1 nonsynonymous","G152F S164I",2
"lib2","SARS-CoV-2","GAGTCAAAAGAAGAAT",3,89.48,10.86,0.02,0.05,2.93,1.1,0,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","GAGTCAAACCCCCCCT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","GAGTCAAACGAATTAA",1,30.43,8.81,-2.02,0.24,2.13,1.11,0.02,">1 nonsynonymous","T15I R27K Q144H P169S",4
"lib2","SARS-CoV-2","GAGTCAAACGTTTAAT",4,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38I E76Y F99N L125F",4
"lib2","SARS-CoV-2","GAGTCAAACTAGAATC",17,141.85,10.88,0.04,0.04,2.91,1.1,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","GAGTCAAATACTGCCA",8,157.62,10.1,-0.73,0.04,2.77,1.03,0,">1 nonsynonymous","N64W D98Q G116T",3
"lib2","SARS-CoV-2","GAGTCAAATAGTTAAT",8,57.94,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","W23M G146E",2
"lib2","SARS-CoV-2","GAGTCAACCGTTTCTT",11,147.94,10.16,-0.68,0.03,2.91,1.05,0,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","GAGTCAAGAGAAATCT",3,5.58,9.89,-0.95,0.44,1.51,1,0.06,">1 nonsynonymous","L38S N40K N58L",3
"lib2","SARS-CoV-2","GAGTCAAGTCTTCGCT",6,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L S113I E141R N151T",4
"lib2","SARS-CoV-2","GAGTCAAGTGTACCAA",7,39.12,8.43,-2.41,0.2,2.15,1,0.01,">1 nonsynonymous","R16Q D112S",2
"lib2","SARS-CoV-2","GAGTCAATGATCATTT",6,95.17,10.5,-0.34,0.05,2.96,1.05,0,">1 nonsynonymous","F44Y K87M",2
"lib2","SARS-CoV-2","GAGTCACAAGCCCGAG",5,85.93,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","F167I",1
"lib2","SARS-CoV-2","GAGTCACGGGCTAAGT",11,107.01,6.08,-4.75,1.07,1.5,1.26,0.03,">1 nonsynonymous","Y35S D59Y N120F A145L",4
"lib2","SARS-CoV-2","GAGTCACTAATGAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I P96K G152N",3
"lib2","SARS-CoV-2","GAGTCACTCACTTATT",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y I104N",2
"lib2","SARS-CoV-2","GAGTCACTCGTGCGAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","T3P K56* P197S",3
"lib2","SARS-CoV-2","GAGTCACTTATTGATG",1,20.08,7.42,-3.42,0.42,1.5,1.08,0.05,">1 nonsynonymous","C49K F62S F160H S184N",4
"lib2","SARS-CoV-2","GAGTCAGACGGGCACA",8,153.96,9.51,-1.33,0.05,2.88,1.06,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","GAGTCAGGTGGGATTT",3,0.6,NA,NA,NA,NA,NA,NA,"stop","S45F K87* S113L",3
"lib2","SARS-CoV-2","GAGTCATACGGGAAAA",5,63.57,10.86,0.03,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTCATATATAGAAA",1,0.38,NA,NA,NA,NA,NA,NA,"stop","L95* L162M",2
"lib2","SARS-CoV-2","GAGTCATATTAAGTCG",6,51.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2M F44S D112F",3
"lib2","SARS-CoV-2","GAGTCATCAGGAACTA",10,121.1,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","C6S S19G S43A R124F",4
"lib2","SARS-CoV-2","GAGTCATGATATAAGT",3,65.22,8.19,-2.65,0.18,1.95,1.07,0.01,">1 nonsynonymous","Y121F R136L G174Y",3
"lib2","SARS-CoV-2","GAGTCCAACAACGGCT",18,97.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A105E K128E F160I L183M",4
"lib2","SARS-CoV-2","GAGTCCAATAACGCTC",1,19.11,10.78,-0.05,0.05,3,1.02,0,"1 nonsynonymous","P54M",1
"lib2","SARS-CoV-2","GAGTCCAATTTGTACA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","T15N C61V F99T L131* T148L K199M",6
"lib2","SARS-CoV-2","GAGTCCAGGAATGAAT",2,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R S19K Y50D N107D S139P F160N",6
"lib2","SARS-CoV-2","GAGTCCATTCTAAACC",6,65.75,10.57,-0.26,0.03,2.9,1.07,0,"1 nonsynonymous","D97C",1
"lib2","SARS-CoV-2","GAGTCCCAATAGGAAG",2,16.99,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","N58P T63K A89M Y119L",4
"lib2","SARS-CoV-2","GAGTCCGAATAATGAG",1,13.35,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","V65R G101L",2
"lib2","SARS-CoV-2","GAGTCCGACCGCCTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W S36G V181P",3
"lib2","SARS-CoV-2","GAGTCCGTACTGTTTT",5,63.04,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","P161R",1
"lib2","SARS-CoV-2","GAGTCCTACCCATAGT",1,8.88,10.71,-0.13,0.09,2.72,1.34,0,"1 nonsynonymous","T55P",1
"lib2","SARS-CoV-2","GAGTCCTATCCCAACT",7,6.54,NA,NA,NA,NA,NA,NA,"stop","S45* L60R P96S P191N",4
"lib2","SARS-CoV-2","GAGTCCTTATACAGAT",3,31.72,10.42,-0.42,0.06,2.86,1.08,0,"1 nonsynonymous","F185V",1
"lib2","SARS-CoV-2","GAGTCCTTTTACGTTC",1,32.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32C K94C N107D I138V N171Y V182F",6
"lib2","SARS-CoV-2","GAGTCGAAATAAATAC",6,46.62,6.01,-4.83,1,1.5,1.13,0.02,">1 nonsynonymous","E10K R27I L95P N107L",4
"lib2","SARS-CoV-2","GAGTCGAAATAGCAGT",17,29.16,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6I D90F F99C V103N F156Q",5
"lib2","SARS-CoV-2","GAGTCGACCCTCCACT",7,53.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10R G86R Y91W T170F",4
"lib2","SARS-CoV-2","GAGTCGACTGCCTCGA",7,0.85,NA,NA,NA,NA,NA,NA,"stop","S36* C49W",2
"lib2","SARS-CoV-2","GAGTCGATTTTGTGAG",2,10,10.91,0.08,0.08,2.82,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTCGCTCGACACTT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","I28S N58* F134N",3
"lib2","SARS-CoV-2","GAGTCGGATTAGAACT",8,112.02,10.76,-0.07,0.03,2.99,1.04,0,"1 nonsynonymous","T140V",1
"lib2","SARS-CoV-2","GAGTCGTCTAATCGTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","GAGTCTAAAAGATATA",4,56.37,10.12,-0.71,0.06,2.71,1.07,0,">1 nonsynonymous","C6S F62S",2
"lib2","SARS-CoV-2","GAGTCTAACTAAACCA",13,131.09,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S69I A105I L162P",3
"lib2","SARS-CoV-2","GAGTCTAAGAAGGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A67P V77Q K199M",4
"lib2","SARS-CoV-2","GAGTCTAAGGACAGAA",3,66.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y21A D59N T148Y S164R Q176H",5
"lib2","SARS-CoV-2","GAGTCTAATTAATGAA",2,1.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S69R",1
"lib2","SARS-CoV-2","GAGTCTAGACGATCAA",8,152.54,10.16,-0.68,0.04,2.81,1.03,0,">1 nonsynonymous","N4W T85N Q163R",3
"lib2","SARS-CoV-2","GAGTCTATCTTCCGGG",5,52.94,10.72,-0.12,0.06,2.91,1.11,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GAGTCTATTCGGCCCT",2,28.63,7.39,-3.45,0.43,1.5,1.05,0.06,">1 nonsynonymous","G9S I88L G155V F167S",4
"lib2","SARS-CoV-2","GAGTCTCGACAGTATA",4,63.07,9.42,-1.42,0.09,2.02,1.07,0,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","GAGTCTCTCTGTCTAT",4,42.58,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19L T55M D137L C158E G174P",5
"lib2","SARS-CoV-2","GAGTCTGCAGAAGTCA",5,22.36,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F12H Y50S Y143N",3
"lib2","SARS-CoV-2","GAGTCTGCCAGAATTA",4,28.48,10.57,-0.27,0.1,2.77,1.15,0,">1 nonsynonymous","V37L F62S",2
"lib2","SARS-CoV-2","GAGTCTGCGATCCACA",2,21.52,10.94,0.11,0.08,2.92,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTCTTAAAAAGTCC",1,16.45,6,-4.84,1.36,3,1.08,0,">1 nonsynonymous","D59F I80H E141N",3
"lib2","SARS-CoV-2","GAGTCTTACAATCATC",3,19.7,9.74,-1.1,0.12,2.35,1,0.01,">1 nonsynonymous","C61D Y91S",2
"lib2","SARS-CoV-2","GAGTCTTACTCAATCT",10,96.02,10.73,-0.11,0.04,2.92,1.09,0,">1 nonsynonymous","V11I Y119K N171T K198V",4
"lib2","SARS-CoV-2","GAGTGAAAAAAGGATC",3,8.54,6,-4.84,2,1.83,1.13,0.02,">1 nonsynonymous","V71W E76A L95D A105K V173D",5
"lib2","SARS-CoV-2","GAGTGAAAAATGTGAA",1,28.13,10.06,-0.77,0.07,2.91,1.02,0,">1 nonsynonymous","G155F S200Y",2
"lib2","SARS-CoV-2","GAGTGAAATAACGAGG",3,5.09,NA,NA,NA,NA,NA,NA,"stop","Y35H P96* V115Y K198M",4
"lib2","SARS-CoV-2","GAGTGAAATGTTCTTA",3,0.34,NA,NA,NA,NA,NA,NA,"stop","A18K N118* P149S L187Q T201*",5
"lib2","SARS-CoV-2","GAGTGAAATTAGGTTC",2,48.79,10.76,-0.07,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGAACAACTCCAG",3,40.51,10.79,-0.05,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGAACAAGTGCTG",8,98.15,10.32,-0.52,0.06,2.65,1.06,0,">1 nonsynonymous","Y123L F160H P191V",3
"lib2","SARS-CoV-2","GAGTGAACCCATATTT",12,361.18,10.56,-0.27,0.02,2.95,1.04,0,"1 nonsynonymous","I142Y",1
"lib2","SARS-CoV-2","GAGTGAACTCAAACTT",12,171.74,10.9,0.06,0.07,2.88,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGAAGAGAAGGCA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10V K56W I104G N157*",4
"lib2","SARS-CoV-2","GAGTGAAGTTAATGGT",2,32.81,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36W D98N Y175R F185S",4
"lib2","SARS-CoV-2","GAGTGAATTCAGGCAA",9,96.9,9.89,-0.95,0.06,2.18,1.03,0,">1 nonsynonymous","D59S N64P K94C",3
"lib2","SARS-CoV-2","GAGTGAATTCCAAGGG",2,23.35,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","S43Y T55C R124V N151P F156S",5
"lib2","SARS-CoV-2","GAGTGACACAACAATA",3,49.42,8.22,-2.62,0.11,1.68,1.11,0.01,">1 nonsynonymous","Y123E S139C",2
"lib2","SARS-CoV-2","GAGTGACTTTCTCATA",7,23.05,8.3,-2.54,0.52,1.5,1,0.07,">1 nonsynonymous","K26L D34I F134C",3
"lib2","SARS-CoV-2","GAGTGATATGGACGGC",4,0.51,NA,NA,NA,NA,NA,NA,"stop","A33R I104K D137L Q163*",4
"lib2","SARS-CoV-2","GAGTGATGTTCCTTCA",3,40.77,7.32,-3.52,0.14,1.5,1.09,0.01,">1 nonsynonymous","F44L G86C",2
"lib2","SARS-CoV-2","GAGTGCACTGCAAGTA",24,10.77,NA,NA,NA,NA,NA,NA,"stop","R25* P133L Y159R",3
"lib2","SARS-CoV-2","GAGTGCCATTCAAAAA",5,0,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","GAGTGCCGAAAAGGGC",5,0.19,NA,NA,NA,NA,NA,NA,"stop","S19R V37* L131*",3
"lib2","SARS-CoV-2","GAGTGCCGGCTCGGAC",3,83.33,9.22,-1.62,0.07,2.73,1.01,0,">1 nonsynonymous","V37F T85P Y121P",3
"lib2","SARS-CoV-2","GAGTGCCTGGCCATGC",8,98.4,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V115C C158A",2
"lib2","SARS-CoV-2","GAGTGCGAACTATGTT",9,101.53,10.88,0.04,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGCGCAAACTACC",5,33.88,10.89,0.05,0.17,2.8,1.05,0.01,">1 nonsynonymous","T15S Y66F",2
"lib2","SARS-CoV-2","GAGTGCTAAGGTACAA",3,63.43,8.58,-2.26,0.09,2.93,1.06,0,"1 nonsynonymous","Y159V",1
"lib2","SARS-CoV-2","GAGTGCTGACCTCGTT",3,0.87,NA,NA,NA,NA,NA,NA,"stop","G9A I28R S36* S147C",4
"lib2","SARS-CoV-2","GAGTGCTGTGTTAGAG",2,7.38,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","L5W V37N N64T A81P F99R N107Y",6
"lib2","SARS-CoV-2","GAGTGCTTGGAGATGC",9,20.41,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y66P I104T K198N",3
"lib2","SARS-CoV-2","GAGTGGAAAAAAGTAG",1,9.45,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V77S G86V",2
"lib2","SARS-CoV-2","GAGTGGAAACGAATCA",4,45.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D98S F167C",2
"lib2","SARS-CoV-2","GAGTGGAAATTGGTAC",3,41.22,8.9,-1.93,0.09,2.69,1.08,0,">1 nonsynonymous","Q144L N151T",2
"lib2","SARS-CoV-2","GAGTGGACATGCTTAT",8,68.89,10.73,-0.11,0.05,2.98,1,0,"1 nonsynonymous","D98P",1
"lib2","SARS-CoV-2","GAGTGGACCAACCTAT",6,85.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L57D N120A F167L Y178S S200L",5
"lib2","SARS-CoV-2","GAGTGGACTCAGCGAC",3,93.21,8.61,-2.23,0.11,2.96,1.09,0,">1 nonsynonymous","K87S G117S F160W",3
"lib2","SARS-CoV-2","GAGTGGATGTCACATA",6,48.71,6.81,-4.03,0.17,1.67,1.12,0,">1 nonsynonymous","K48R C150Y",2
"lib2","SARS-CoV-2","GAGTGGGCCTGATTCA",16,112.87,6.54,-4.3,0.46,1.5,1.26,0.02,">1 nonsynonymous","F70W S184G",2
"lib2","SARS-CoV-2","GAGTGGGGACCCGCAA",4,44.75,9.21,-1.63,0.07,2.1,1.05,0,">1 nonsynonymous","C31R N40F K114M F134Y",4
"lib2","SARS-CoV-2","GAGTGGTCCAGCACCC",6,4.31,NA,NA,NA,NA,NA,NA,"stop","P7I N13S L131* R136I",4
"lib2","SARS-CoV-2","GAGTGTAAACATAGGT",5,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","GAGTGTAAATACTATC",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103N G116K K128G P133S S200C",5
"lib2","SARS-CoV-2","GAGTGTAACACCCGTT",7,47.91,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S29K Q84L A105G C150A",4
"lib2","SARS-CoV-2","GAGTGTATAGCATCCT",2,68.63,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9Y A22E T85R C150L",4
"lib2","SARS-CoV-2","GAGTGTCACACCGCTA",2,54.07,10.21,-0.63,0.06,2.5,1.04,0,">1 nonsynonymous","D34N V77M I138L T148S",4
"lib2","SARS-CoV-2","GAGTGTCTACGTCACA",10,219.86,10.58,-0.26,0.05,2.92,1.08,0,">1 nonsynonymous","K128W A190S",2
"lib2","SARS-CoV-2","GAGTGTCTAGAACGCA",4,70.19,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5H F44K T85M P149F Q176L",5
"lib2","SARS-CoV-2","GAGTGTGTATAATCGT",1,6.69,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S43T C102Y N130L G172R",4
"lib2","SARS-CoV-2","GAGTGTGTCGCGTCTG",6,74.94,10.82,-0.01,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGTTAGAACAAAG",8,67.01,6.08,-4.76,0.87,1.5,1.21,0.02,">1 nonsynonymous","E10M A14P S139C",3
"lib2","SARS-CoV-2","GAGTGTTATTTTGAAA",15,112.39,10.29,-0.55,0.05,2.72,1.05,0,">1 nonsynonymous","R73K T140P",2
"lib2","SARS-CoV-2","GAGTGTTCGCAGCCAG",4,49.38,10.82,-0.01,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTGTTTAGAAGACA",1,20.96,10.31,-0.53,0.13,2.6,1.05,0.01,">1 nonsynonymous","N13F L187F",2
"lib2","SARS-CoV-2","GAGTGTTTGCAAGAAA",10,47.14,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F17S G86M D90L F99L C158A",5
"lib2","SARS-CoV-2","GAGTTAAAACACCGAA",3,0.65,NA,NA,NA,NA,NA,NA,"stop","V52* G166M",2
"lib2","SARS-CoV-2","GAGTTAAAATTGTATG",8,52.07,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y165S T170V",2
"lib2","SARS-CoV-2","GAGTTAAAGGGCTTAA",2,31.13,10.64,-0.19,0.05,2.96,1.06,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GAGTTAAATAGTGCAT",2,59.42,10.75,-0.09,0.04,3,1.01,0,">1 nonsynonymous","G9W K199M",2
"lib2","SARS-CoV-2","GAGTTAACCAAACTAA",13,247.3,8.72,-2.11,0.08,2.88,1.12,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","GAGTTAACTAATTTCT",7,53.16,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y121T P161C",2
"lib2","SARS-CoV-2","GAGTTAAGCAAACTAA",3,6.29,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I72S G101D D112R I138Y E154G S184P",6
"lib2","SARS-CoV-2","GAGTTAATAACCTATG",1,6.07,10.64,-0.2,0.13,2.97,1,0,"1 nonsynonymous","Y178V",1
"lib2","SARS-CoV-2","GAGTTAATACGACCAA",6,32.97,6.54,-4.3,0.34,1.5,1.12,0.01,">1 nonsynonymous","Y21K I88L N171F",3
"lib2","SARS-CoV-2","GAGTTACGAAGACTCG",7,12.82,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","I104R L131R",2
"lib2","SARS-CoV-2","GAGTTAGCGGAAAGGG",3,2.29,NA,NA,NA,NA,NA,NA,"stop","V37N L95F D112E R136*",4
"lib2","SARS-CoV-2","GAGTTAGGGAAAGAAT",1,44.28,10.83,-0.01,0.04,2.92,1.07,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","GAGTTAGTACATATTC",7,175.47,10.82,-0.01,0.05,2.91,1.09,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","GAGTTAGTGTTCGAAA",1,13.19,9.28,-1.56,0.14,1.83,1.22,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","GAGTTATAAACTACGA",4,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V E76G G117A K132E E141N",5
"lib2","SARS-CoV-2","GAGTTATAATCGATAA",4,31.58,6,-4.84,2,3,1.18,0,">1 nonsynonymous","P82R I104L N120Y F156V",4
"lib2","SARS-CoV-2","GAGTTATATAATCGAC",3,63.76,9.66,-1.18,0.05,2.74,1.04,0,">1 nonsynonymous","S36C A145E",2
"lib2","SARS-CoV-2","GAGTTATATACACACT",13,4.22,NA,NA,NA,NA,NA,NA,"stop","T46* D90R K199G",3
"lib2","SARS-CoV-2","GAGTTATATGTTGTTA",1,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C Y91A D112I L125F C158D K199F",6
"lib2","SARS-CoV-2","GAGTTATGCTCACAAT",4,33.98,10.82,-0.01,0.08,2.9,1.12,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","GAGTTATTTCGACTTC",2,43.09,8.58,-2.26,0.09,2.76,1.09,0,">1 nonsynonymous","Y143N E154P",2
"lib2","SARS-CoV-2","GAGTTCAAACCACATG",4,0.63,NA,NA,NA,NA,NA,NA,"stop","C31W Y39S T100G N120* C150D F160R",6
"lib2","SARS-CoV-2","GAGTTCAAATCAAACT",4,1.95,NA,NA,NA,NA,NA,NA,"stop","L122*",1
"lib2","SARS-CoV-2","GAGTTCAATATTTAAT",6,123.44,10.94,0.1,0.07,2.94,1.07,0,"1 nonsynonymous","R16T",1
"lib2","SARS-CoV-2","GAGTTCACCGACTCTG",2,20.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6G F99A",2
"lib2","SARS-CoV-2","GAGTTCACCTCATTTA",2,12.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P82K C102N",2
"lib2","SARS-CoV-2","GAGTTCACGGCAACAA",1,14.53,6.66,-4.18,0.42,1.5,1.12,0.03,">1 nonsynonymous","T46F G101S",2
"lib2","SARS-CoV-2","GAGTTCACTTAAATCA",12,103.91,6.09,-4.74,0.44,1.5,1.12,0,">1 nonsynonymous","P54T R73I W106L F134R S139P",5
"lib2","SARS-CoV-2","GAGTTCAGTAGTGCGC",2,21.58,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","A14M A18S R73V D98V I104A N157I",6
"lib2","SARS-CoV-2","GAGTTCATACGGGCAT",2,18.26,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9T K48F L57P G101V",4
"lib2","SARS-CoV-2","GAGTTCATAGCACATG",8,119.37,10.85,0.01,0.05,2.94,1.08,0,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","GAGTTCATAGTAAAAA",4,72.65,9.76,-1.08,0.06,2.18,1.02,0,">1 nonsynonymous","N120F V180M",2
"lib2","SARS-CoV-2","GAGTTCATGTCTCTCA",5,0.99,NA,NA,NA,NA,NA,NA,"stop","N1M S29T F47Y Y123* S139A P197K",6
"lib2","SARS-CoV-2","GAGTTCCAAGTGAACG",5,89.15,9.44,-1.4,0.07,2.89,1.04,0,"1 nonsynonymous","G155P",1
"lib2","SARS-CoV-2","GAGTTCCCCGCCAGTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L D112P Y123S R136V",4
"lib2","SARS-CoV-2","GAGTTCCCTTATTTTA",3,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L F70I",2
"lib2","SARS-CoV-2","GAGTTCCGTTGAGGAT",1,23.7,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44S S113P Y123F N151K Q176S",5
"lib2","SARS-CoV-2","GAGTTCCTCAAAATTT",3,44.12,10.71,-0.12,0.03,3,1.03,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","GAGTTCCTCAACGTCT",2,38.9,7.96,-2.87,0.2,1.88,1.11,0.01,">1 nonsynonymous","W106K G166R",2
"lib2","SARS-CoV-2","GAGTTCCTGTGGAAAG",2,12.64,10.02,-0.82,0.1,2.65,1.03,0,">1 nonsynonymous","A18V S41A",2
"lib2","SARS-CoV-2","GAGTTCCTTGCGGTTG",11,3.19,NA,NA,NA,NA,NA,NA,"stop","V11T D98* N130V",3
"lib2","SARS-CoV-2","GAGTTCGCCACAGACT",8,51.16,6.45,-4.38,0.36,1.5,1.09,0.01,">1 nonsynonymous","A42V L57T D98F N107F H189G",5
"lib2","SARS-CoV-2","GAGTTCGGTCTGAATA",12,114.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V32W S45L A81T F99N V173F Y178R",6
"lib2","SARS-CoV-2","GAGTTCGTGCAACTAG",10,135.06,7.32,-3.52,0.21,1.5,1.09,0.01,">1 nonsynonymous","L5P N107F",2
"lib2","SARS-CoV-2","GAGTTCTACTGAGGAG",3,72.84,10.23,-0.61,0.04,2.91,1.01,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","GAGTTCTAGAGCGCTG",2,0,NA,NA,NA,NA,NA,NA,"stop","C31* A42P G86D",3
"lib2","SARS-CoV-2","GAGTTCTCACATTAAG",4,61.42,10.22,-0.61,0.04,2.93,1.01,0,">1 nonsynonymous","A14R I28M T46M N120I",4
"lib2","SARS-CoV-2","GAGTTCTGTGACTTAT",2,94.79,10.67,-0.16,0.12,2.63,1.07,0.01,">1 nonsynonymous","C61Q G146A",2
"lib2","SARS-CoV-2","GAGTTGAAACAGGTAG",2,116.51,8.75,-2.08,0.04,2.24,1.13,0,">1 nonsynonymous","V32M K87Q S139V",3
"lib2","SARS-CoV-2","GAGTTGAAATTAATAC",3,86.72,8.48,-2.35,0.11,2.2,1.07,0,"1 nonsynonymous","P161D",1
"lib2","SARS-CoV-2","GAGTTGATATAAAACG",1,15.83,10.84,0,0.07,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTTGATGCCGGGAC",5,28.88,10.64,-0.2,0.07,2.99,1.04,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","GAGTTGCACTAACCCT",2,44.98,10.22,-0.62,0.06,2.84,1.01,0,"1 nonsynonymous","P133V",1
"lib2","SARS-CoV-2","GAGTTGCCTCTATACC",3,19.2,7.52,-3.31,0.41,1.5,1.12,0.05,">1 nonsynonymous","F12H S45P P149L",3
"lib2","SARS-CoV-2","GAGTTGCCTTGACACA",5,56.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y123S P149G C158L",3
"lib2","SARS-CoV-2","GAGTTGCTTCGAAATC",7,127.28,10.8,-0.04,0.05,2.9,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GAGTTGGAATCCCTCG",5,43.38,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A14S S19F V37I P149C",4
"lib2","SARS-CoV-2","GAGTTGGCAGGTCCTA",10,4804.5,10.79,-0.04,0.03,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GAGTTGGCGGAATACC",2,14.02,6,-4.84,2,3,1.06,0,">1 nonsynonymous","N1E A14M K26E K48Q R73F",5
"lib2","SARS-CoV-2","GAGTTGGGATTAATGG",6,54.62,6.03,-4.8,1.52,1.5,1.22,0.05,">1 nonsynonymous","F44R L57N F70P Y121L S129A",5
"lib2","SARS-CoV-2","GAGTTGTCCATAAGAC",9,71,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y35R V65A V71N G166R",4
"lib2","SARS-CoV-2","GAGTTGTGTACTACCT",56,14.02,NA,NA,NA,NA,NA,NA,"stop","I2N R136*",2
"lib2","SARS-CoV-2","GAGTTTACTCATCTAC",10,121.91,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V20K V173T",2
"lib2","SARS-CoV-2","GAGTTTAGAAAGATAC",4,86.62,9.93,-0.91,0.07,2.82,1.08,0,"1 nonsynonymous","G146Y",1
"lib2","SARS-CoV-2","GAGTTTAGGTAAACTG",1,7.72,10.38,-0.45,0.28,2.76,1.06,0.01,">1 nonsynonymous","F44V E141S",2
"lib2","SARS-CoV-2","GAGTTTATCCTATTAA",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T T15I A18T S36K Y50S G83A I138Y N157V F167R",9
"lib2","SARS-CoV-2","GAGTTTATGATCCCTA",9,79.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40W F99S N130A",3
"lib2","SARS-CoV-2","GAGTTTCAACATCCTA",3,102.6,9.93,-0.9,0.08,2.63,1.01,0,">1 nonsynonymous","C31W L60G",2
"lib2","SARS-CoV-2","GAGTTTCATGACCCCA",1,18.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132T",1
"lib2","SARS-CoV-2","GAGTTTCGTTATCTCC",8,169.26,9.44,-1.39,0.05,2.09,1.04,0,">1 nonsynonymous","E10R Y121N T201C",3
"lib2","SARS-CoV-2","GAGTTTCTTAAAAGCA",10,75.43,8.05,-2.79,0.15,1.5,1.04,0.01,">1 nonsynonymous","D34L Q84K K87Y N109L Y119T",5
"lib2","SARS-CoV-2","GAGTTTGAGAAATCGA",7,123.24,9.23,-1.61,0.03,2.91,1.11,0,">1 nonsynonymous","C61Y T170R",2
"lib2","SARS-CoV-2","GAGTTTGATAATAAAT",2,72.74,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y39L Q84L P169D Q176L H189C",5
"lib2","SARS-CoV-2","GAGTTTGATACGCCTT",8,64.57,9.68,-1.15,0.07,2.59,1.03,0,">1 nonsynonymous","V52A P169L",2
"lib2","SARS-CoV-2","GAGTTTGCAAAAGTGT",6,65.93,9.53,-1.31,0.32,1.5,1,0.05,">1 nonsynonymous","V37Y V103A",2
"lib2","SARS-CoV-2","GAGTTTGCTTGCTTTT",6,162.67,6.44,-4.4,0.28,1.5,1.13,0.01,">1 nonsynonymous","Y119A N157L",2
"lib2","SARS-CoV-2","GAGTTTGCTTGTGCCT",14,25.36,8.2,-2.64,0.29,1.5,1.12,0.05,">1 nonsynonymous","F8R N13K T55F V77I K87T V173R",6
"lib2","SARS-CoV-2","GAGTTTGTCACCATGA",3,36.7,9.79,-1.05,0.07,2.71,1.09,0,">1 nonsynonymous","C6F A14S K199V",3
"lib2","SARS-CoV-2","GAGTTTTCTGAAAAGC",6,194.9,10.63,-0.2,0.05,2.91,1.09,0,">1 nonsynonymous","K48T I142M T148R",3
"lib2","SARS-CoV-2","GAGTTTTTAGTACTAG",1,1.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","GATAAAAAATACACCT",1,36.33,10.17,-0.66,0.12,2.48,1,0.01,">1 nonsynonymous","T15D T46I L57F",3
"lib2","SARS-CoV-2","GATAAAAAATTAACCG",7,103.93,8.78,-2.06,0.06,2.85,1.06,0,">1 nonsynonymous","D98L Y119W",2
"lib2","SARS-CoV-2","GATAAAAACCAAAGTG",1,11.94,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","N4Y Y35L Y39I K48L N120T F167T F185Y",7
"lib2","SARS-CoV-2","GATAAAAACGTAGACG",3,31.65,9.72,-1.11,0.09,2.67,1.03,0,">1 nonsynonymous","E10W E141H N171A",3
"lib2","SARS-CoV-2","GATAAAAACTGAAATC",6,142.09,9.62,-1.22,0.04,2.96,1.02,0,"1 nonsynonymous","F126C",1
"lib2","SARS-CoV-2","GATAAAAATATTTTGG",5,21.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V20L S43P K56L D97R D112Q F167E",6
"lib2","SARS-CoV-2","GATAAAAATGCTATTT",10,4.41,NA,NA,NA,NA,NA,NA,"stop","S45P Y66* W106Y S139Y N157S F185I",6
"lib2","SARS-CoV-2","GATAAAACAAATACAA",1,5.85,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","D68R",1
"lib2","SARS-CoV-2","GATAAAACAGCCAGTT",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T G86N",2
"lib2","SARS-CoV-2","GATAAAACGAGAGAAT",8,36.04,6,-4.84,2,3,1.45,0.01,">1 nonsynonymous","S19F D98V",2
"lib2","SARS-CoV-2","GATAAAACTCGCCTAA",3,29.21,9.29,-1.55,0.08,2.83,1.17,0,">1 nonsynonymous","R16T Y119V G196K",3
"lib2","SARS-CoV-2","GATAAAACTGGGGGCC",2,32.41,10.84,0,0.09,2.89,1.07,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","GATAAAAGAACGAGAA",1,38.59,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","S45C P177K",2
"lib2","SARS-CoV-2","GATAAAAGCAAATCCA",13,56.44,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","E76Y G83V G86T D98T",4
"lib2","SARS-CoV-2","GATAAAAGGTCTGATT",1,18.51,6,-4.84,2,1.5,1.08,0.01,"1 nonsynonymous","L95W",1
"lib2","SARS-CoV-2","GATAAAAGTGATAAAA",15,212.61,10.9,0.06,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAAAAGTGCAGCCG",16,113.97,10.85,0.02,0.06,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAAAAGTTAACAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D98* V115S P197S",3
"lib2","SARS-CoV-2","GATAAAATAAAGACCC",1,37.92,10.15,-0.69,0.09,2.71,1.05,0,">1 nonsynonymous","Y178R P197T",2
"lib2","SARS-CoV-2","GATAAAATAAATAGAT",1,10.68,8.16,-2.68,0.25,2.97,1.04,0.04,">1 nonsynonymous","S129G N157R",2
"lib2","SARS-CoV-2","GATAAAATCACTTACA",13,113.61,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5R A105V F167K",3
"lib2","SARS-CoV-2","GATAAAATGAACCTTT",11,65.34,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N92L K132S P177R",3
"lib2","SARS-CoV-2","GATAAAATTACAAATC",6,20.22,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","R73K W106P E141S",3
"lib2","SARS-CoV-2","GATAAAATTCATCCGG",8,23.02,8.75,-2.09,0.13,2.59,1.06,0.01,">1 nonsynonymous","T63G A81Q N120T",3
"lib2","SARS-CoV-2","GATAAAATTTATCACC",8,202.27,10.42,-0.42,0.04,2.87,1.1,0,">1 nonsynonymous","Q84C T100Y G174S",3
"lib2","SARS-CoV-2","GATAAACACTAAAAAT",1,10.59,8.11,-2.73,0.31,2.27,1.1,0.01,">1 nonsynonymous","C6L Q163D",2
"lib2","SARS-CoV-2","GATAAACAGGTAGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95C P149T N171T",3
"lib2","SARS-CoV-2","GATAAACATTTGATAC",3,26.72,10.78,-0.06,0.08,2.87,1.17,0,"1 nonsynonymous","A67L",1
"lib2","SARS-CoV-2","GATAAACCTACTTACA",5,66.42,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","K128V Q176I V181D",3
"lib2","SARS-CoV-2","GATAAACGAAAGTCAA",8,82.17,9.99,-0.84,0.07,2.58,1.03,0,">1 nonsynonymous","K94Q S129C",2
"lib2","SARS-CoV-2","GATAAACGACACGGCT",5,74.69,10.66,-0.18,0.04,2.81,1.18,0,">1 nonsynonymous","P149F Y178F",2
"lib2","SARS-CoV-2","GATAAACGCTTATCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","D97E Q176* P197A",3
"lib2","SARS-CoV-2","GATAAACTAAAAACAA",2,31.99,9.69,-1.14,0.05,2.89,1.11,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","GATAAACTAAGAGAAG",11,48.14,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K94Q N118D I138V Y165W",4
"lib2","SARS-CoV-2","GATAAACTAGCCGATA",11,36.83,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A42H L95K S139V S147P V173Y",5
"lib2","SARS-CoV-2","GATAAACTAGCGTACT",3,49.32,8.24,-2.59,0.13,2.35,1.12,0.01,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","GATAAACTCCAGAAAA",6,1,NA,NA,NA,NA,NA,NA,"stop","N13L K56* V103D T170I",4
"lib2","SARS-CoV-2","GATAAACTTCAAACCG",3,17.29,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R73F I104K",2
"lib2","SARS-CoV-2","GATAAAGACCTCAGTC",1,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y L95Q G101D R127K",4
"lib2","SARS-CoV-2","GATAAAGATGTTGCCG",8,29.66,9.04,-1.8,0.13,1.94,1.09,0.01,">1 nonsynonymous","N4T N58T Q84F K114C",4
"lib2","SARS-CoV-2","GATAAAGCAATCAAAT",2,14.5,8.15,-2.69,0.17,2.52,1.11,0.01,">1 nonsynonymous","G9R S129A A145L P149L",4
"lib2","SARS-CoV-2","GATAAAGCACTACAAC",5,17.04,7.24,-3.59,0.37,2.14,1.27,0.05,">1 nonsynonymous","G51I T100Y F134L",3
"lib2","SARS-CoV-2","GATAAAGGAAAGGACC",8,59.43,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","GATAAAGGAAATGCTA",4,30.9,8.94,-1.89,0.18,1.75,1.15,0.01,">1 nonsynonymous","K26V V52Y N107T",3
"lib2","SARS-CoV-2","GATAAAGGAGCGGATT",2,53.81,7.02,-3.82,0.21,1.62,1.21,0.01,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","GATAAAGGCAACCAAA",6,22.17,6.93,-3.91,0.83,1.5,1.21,0.05,">1 nonsynonymous","P7E N13I R27Q F47L D59Y L95T W106Q",7
"lib2","SARS-CoV-2","GATAAAGGCGCTAGTT",2,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46Q G51V L95I",3
"lib2","SARS-CoV-2","GATAAAGTACTTCCGG",9,88.73,6.07,-4.76,0.53,1.5,1.11,0.01,">1 nonsynonymous","G9E L38P P54T N64W A89I L122S",6
"lib2","SARS-CoV-2","GATAAAGTCAGATGCT",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V R136M",2
"lib2","SARS-CoV-2","GATAAAGTGAATGCTA",1,5.71,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5Q A18R S41G S69R",4
"lib2","SARS-CoV-2","GATAAAGTGATAACTG",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94C F134G Q176T L183H",4
"lib2","SARS-CoV-2","GATAAATAATAAGAAA",10,1.81,NA,NA,NA,NA,NA,NA,"stop","S36* Q84K Y91T T100W Y143I",5
"lib2","SARS-CoV-2","GATAAATACAAATAAA",2,18.44,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","V32L C102R I142L G172S",4
"lib2","SARS-CoV-2","GATAAATACATTAAAA",3,5.78,NA,NA,NA,NA,NA,NA,"stop","K48D Q144V P149* G166I",4
"lib2","SARS-CoV-2","GATAAATACATTATGT",10,40.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84P R127G E135P",3
"lib2","SARS-CoV-2","GATAAATACCGTTTAC",25,2.51,NA,NA,NA,NA,NA,NA,"stop","D75L Q84* A105Q N151S",4
"lib2","SARS-CoV-2","GATAAATACGTTATGC",1,41.47,10.97,0.13,0.08,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAAATAGCGCTTGG",1,37.27,9.25,-1.59,0.3,1.5,1,0.04,">1 nonsynonymous","C102V N109Y T170N Q176L",4
"lib2","SARS-CoV-2","GATAAATATACATACA",4,41.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W106T G146V",2
"lib2","SARS-CoV-2","GATAAATCAATACTAA",2,80.95,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N92S N107M Y143C T148E Y178A",5
"lib2","SARS-CoV-2","GATAAATCACTACAGG",2,26.34,10.31,-0.52,0.05,2.9,1.08,0,">1 nonsynonymous","S45R D59S",2
"lib2","SARS-CoV-2","GATAAATCCAGTGTGC",3,50.07,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T15L A89V Y93T R127V S139D",5
"lib2","SARS-CoV-2","GATAAATCTGCCGAAA",3,22.81,9.91,-0.93,0.12,2.11,1,0.01,">1 nonsynonymous","T15I F62D",2
"lib2","SARS-CoV-2","GATAAATGAATAAGTT",2,48.51,10.23,-0.61,0.06,2.79,1.04,0,"1 nonsynonymous","T46G",1
"lib2","SARS-CoV-2","GATAAATGTATCATGT",21,205.57,7.37,-3.47,0.27,1.5,1.08,0.02,">1 nonsynonymous","D34A D90A Y119K A145M N171V K198T",6
"lib2","SARS-CoV-2","GATAAATTCTAACGGT",20,247.11,9.59,-1.24,0.03,1.95,1.05,0,">1 nonsynonymous","R16W T46K I104Y Q144T",4
"lib2","SARS-CoV-2","GATAAATTGTGCTCGA",12,67.63,10.54,-0.3,0.03,2.92,1.08,0,"1 nonsynonymous","D97C",1
"lib2","SARS-CoV-2","GATAAATTTGAAAGAA",2,55.04,9.19,-1.65,0.06,3,1.03,0,">1 nonsynonymous","T100L Y119W T140V",3
"lib2","SARS-CoV-2","GATAAATTTGAACCAT",8,72.07,8.02,-2.81,0.18,1.51,1.15,0.01,">1 nonsynonymous","G86W T100L T201M",3
"lib2","SARS-CoV-2","GATAACAAACTAAAGG",4,87.27,10.69,-0.15,0.05,2.94,1.09,0,">1 nonsynonymous","A14K T201R",2
"lib2","SARS-CoV-2","GATAACAAGCACTAGG",1,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4V D90Y N118Y",3
"lib2","SARS-CoV-2","GATAACAAGTACTAAT",1,100.12,10.42,-0.41,0.03,2.99,1.01,0,"1 nonsynonymous","F47C",1
"lib2","SARS-CoV-2","GATAACAATAGCCAAC",4,22.57,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A105N D112V",2
"lib2","SARS-CoV-2","GATAACAATCTGGTCC",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K I104S S129F S139H",4
"lib2","SARS-CoV-2","GATAACAATTCTACCT",7,39.71,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C31V V77L Y93L T100A G116S",5
"lib2","SARS-CoV-2","GATAACAATTGCGAGT",8,45.05,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A42T K48R E76P P161A T201P",5
"lib2","SARS-CoV-2","GATAACACATACTTCC",7,149.44,10.67,-0.17,0.02,2.95,1.08,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","GATAACAGGACCTATT",8,124.25,8.21,-2.63,0.16,1.69,1.07,0.01,">1 nonsynonymous","C61E N107S F167Y",3
"lib2","SARS-CoV-2","GATAACATCATACGAT",3,0.83,NA,NA,NA,NA,NA,NA,"stop","Y93* T100S L187I",3
"lib2","SARS-CoV-2","GATAACATCCCCGAAA",4,0.54,NA,NA,NA,NA,NA,NA,"stop","N1S F62* D98E",3
"lib2","SARS-CoV-2","GATAACATCGATCTTA",3,33.3,6.57,-4.26,0.6,1.5,1.1,0.05,">1 nonsynonymous","G86R G101V E141K",3
"lib2","SARS-CoV-2","GATAACCAGATTAGAC",8,36.66,10.81,-0.02,0.12,2.78,1.14,0.01,"synonymous","",0
"lib2","SARS-CoV-2","GATAACCCTACATACG",5,36.27,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K94L L131R N157M",3
"lib2","SARS-CoV-2","GATAACGAATCAACTC",12,198.98,9.28,-1.56,0.03,2.9,1.09,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","GATAACGACCTAATTT",16,507.53,10.08,-0.76,0.04,2.42,1.02,0,"1 nonsynonymous","L95C",1
"lib2","SARS-CoV-2","GATAACGAGCCTCCCG",7,35.62,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S41D T63L G86S Y119E",4
"lib2","SARS-CoV-2","GATAACGCCTAGGAGC",21,302.31,10.83,-0.01,0.05,2.91,1.08,0,">1 nonsynonymous","L122N S129I V173K",3
"lib2","SARS-CoV-2","GATAACGCTGAGCTGA",5,20.27,7.46,-3.38,0.38,1.5,1.19,0.05,">1 nonsynonymous","A33L F99A",2
"lib2","SARS-CoV-2","GATAACTACAACATTT",5,29.22,6.45,-4.39,0.32,1.5,1.04,0.01,">1 nonsynonymous","L60E I88S I142S",3
"lib2","SARS-CoV-2","GATAACTAGTCTTTAA",9,89.13,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8V D90T W106S S129H E141M H189R",6
"lib2","SARS-CoV-2","GATAACTATTGGTAAG",9,26.3,6.42,-4.41,0.93,1.5,1.19,0.04,">1 nonsynonymous","K56R E135V L183W A192C",4
"lib2","SARS-CoV-2","GATAACTCCAGCGTAC",6,39.16,6,-4.84,1.72,2.42,1.14,0,">1 nonsynonymous","F17G S69R L122K L131F F156H V181S K198V",7
"lib2","SARS-CoV-2","GATAACTCCGAATGAA",8,34.02,10.85,0.02,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GATAACTCGTGGTAGT",4,82.15,9.07,-1.77,0.18,1.5,1,0.01,">1 nonsynonymous","T100N L162R",2
"lib2","SARS-CoV-2","GATAACTTATAATCTA",4,70.33,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A89L N157I",2
"lib2","SARS-CoV-2","GATAACTTCCCCTCTT",3,27.08,10.52,-0.32,0.06,2.82,1.1,0,">1 nonsynonymous","W106F S147N",2
"lib2","SARS-CoV-2","GATAAGAACGTAACTG",2,2.07,NA,NA,NA,NA,NA,NA,"stop","K94Y N130A G174*",3
"lib2","SARS-CoV-2","GATAAGAAGGCAAAAA",3,55.51,6.18,-4.66,0.6,1.5,1.18,0.01,">1 nonsynonymous","Y35I D97G I104M E141S Y175L",5
"lib2","SARS-CoV-2","GATAAGAATTCATACG",5,17.09,7.34,-3.5,0.46,1.5,1.12,0.08,">1 nonsynonymous","D98E G116W C150S",3
"lib2","SARS-CoV-2","GATAAGACTGGATTGG",6,92.53,10.49,-0.34,0.04,2.89,1.09,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","GATAAGATAGATGGCT",2,0.64,NA,NA,NA,NA,NA,NA,"stop","C6Y T55K Q168* E186G",4
"lib2","SARS-CoV-2","GATAAGATCATACGTA",3,3.29,NA,NA,NA,NA,NA,NA,"stop","N40Q K56* F160Y",3
"lib2","SARS-CoV-2","GATAAGATCGCATTAC",16,2.37,NA,NA,NA,NA,NA,NA,"stop","P7* A42S",2
"lib2","SARS-CoV-2","GATAAGATGTACGGAG",5,128.29,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R16W V77E F134A",3
"lib2","SARS-CoV-2","GATAAGCAAACTGACA",6,83.49,10.52,-0.32,0.05,2.85,1.05,0,"1 nonsynonymous","P133E",1
"lib2","SARS-CoV-2","GATAAGCAAGACAATT",2,28.27,9.57,-1.27,0.15,2.01,1.08,0.01,">1 nonsynonymous","T15I S69M",2
"lib2","SARS-CoV-2","GATAAGCCACAGTAAT",2,31.34,10.68,-0.15,0.07,2.95,1.03,0,"1 nonsynonymous","S129F",1
"lib2","SARS-CoV-2","GATAAGCCGCGGAAAT",12,122.01,9.44,-1.4,0.07,2.02,1.06,0,">1 nonsynonymous","L38P F160V",2
"lib2","SARS-CoV-2","GATAAGCCTTAGTGAT",6,69.95,8.53,-2.31,0.13,2.01,1.12,0.01,">1 nonsynonymous","A14V S45A G74A",3
"lib2","SARS-CoV-2","GATAAGCGACATCTCG",2,10.27,10.73,-0.11,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAAGCTCCTCATTC",7,139.9,10.9,0.06,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAAGGACATATAGG",2,42.53,10.87,0.03,0.04,3,1.01,0,">1 nonsynonymous","A22K A190E",2
"lib2","SARS-CoV-2","GATAAGGATATTACCT",3,4.02,NA,NA,NA,NA,NA,NA,"stop","S19* N64L D112K",3
"lib2","SARS-CoV-2","GATAAGGGAGACGGGG",4,34.98,7.6,-3.24,0.28,1.5,1.09,0.02,">1 nonsynonymous","Y91H W106V",2
"lib2","SARS-CoV-2","GATAAGGGCATTGGGA",2,5.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L D97K N120M C150M",4
"lib2","SARS-CoV-2","GATAAGGGCTACCTAA",7,44.61,6,-4.84,1.61,1.5,1.11,0.01,">1 nonsynonymous","T55Y Q84L D98F V103C E135V",5
"lib2","SARS-CoV-2","GATAAGGGTAAACGAT",5,25.94,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","I2T D59K V103S F167Y",4
"lib2","SARS-CoV-2","GATAAGGTAAGCCGTT",4,47.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L P82I",2
"lib2","SARS-CoV-2","GATAAGTAAATGTACG",1,4.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATAAGTACATTTATT",8,102,10.78,-0.05,0.03,2.97,1.05,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","GATAAGTACCCAAAAT",3,5.81,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","C49W L57G G74A F99N V103T G116L T201K",7
"lib2","SARS-CoV-2","GATAAGTATAGATAAA",12,142.56,10.23,-0.61,0.03,2.92,1.05,0,">1 nonsynonymous","D90S E154D",2
"lib2","SARS-CoV-2","GATAAGTCCTGGAAAG",13,241.16,10.3,-0.54,0.03,2.89,1.05,0,">1 nonsynonymous","P149R G155M",2
"lib2","SARS-CoV-2","GATAAGTCCTGTTAAC",6,1.65,NA,NA,NA,NA,NA,NA,"stop","R25* G174M",2
"lib2","SARS-CoV-2","GATAATAAAATAATTC",3,0.53,NA,NA,NA,NA,NA,NA,"stop","V11I Y39* G86V N118Q S139Y",5
"lib2","SARS-CoV-2","GATAATAAAATGCAAA",1,70.59,10.75,-0.09,0.03,2.95,1.06,0,"1 nonsynonymous","E186K",1
"lib2","SARS-CoV-2","GATAATAAACATAAGT",1,19.64,10.06,-0.77,0.1,2.64,1.06,0.01,">1 nonsynonymous","N40S N107A S200V",3
"lib2","SARS-CoV-2","GATAATAAACATGGAC",8,41.59,8.45,-2.38,0.09,1.77,1.04,0,">1 nonsynonymous","Y91D V153H A192C",3
"lib2","SARS-CoV-2","GATAATAAAGTGAAGT",5,116.41,8.54,-2.29,0.12,2.61,1.09,0.01,">1 nonsynonymous","V37E S113Q G196L",3
"lib2","SARS-CoV-2","GATAATAAATACTAAA",4,29.17,6,-4.84,0.91,1.5,1.06,0.01,">1 nonsynonymous","A22L R124E R136K",3
"lib2","SARS-CoV-2","GATAATAAATCCTCGC",18,169.6,8.87,-1.96,0.11,1.61,1.07,0.01,">1 nonsynonymous","F12G C61L K198R",3
"lib2","SARS-CoV-2","GATAATAACAGACAAA",3,49.01,8.44,-2.4,0.12,2.39,1.04,0.01,">1 nonsynonymous","G9V S43V A67V K87M L111H P169F",6
"lib2","SARS-CoV-2","GATAATAACATTTACG",2,0.1,NA,NA,NA,NA,NA,NA,"stop","W23* G146L V180E",3
"lib2","SARS-CoV-2","GATAATAAGCAAAAAA",4,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132W V181K",2
"lib2","SARS-CoV-2","GATAATAAGCTATACC",2,20.21,9.08,-1.76,0.11,2.87,1.1,0.01,">1 nonsynonymous","V52F Q144E G152P",3
"lib2","SARS-CoV-2","GATAATAATAATGAAC",6,115.19,10.78,-0.06,0.03,2.94,1.07,0,"1 nonsynonymous","D59N",1
"lib2","SARS-CoV-2","GATAATAATATTGGCA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","T15* V77* T100S Q144D T201S",5
"lib2","SARS-CoV-2","GATAATACAGACAATG",1,5.73,10.28,-0.55,0.12,3,1.07,0,">1 nonsynonymous","T55Y V153G E186V",3
"lib2","SARS-CoV-2","GATAATACATCAGTTC",3,211.17,10.68,-0.16,0.02,3,1,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","GATAATACGATTTTAG",9,40.17,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","D112M P149R T170S E186P",4
"lib2","SARS-CoV-2","GATAATACTCAAGCTA",1,37.23,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L38R C49T T63I K94V Y119W",5
"lib2","SARS-CoV-2","GATAATACTCGCTGAT",36,22.1,NA,NA,NA,NA,NA,NA,"stop","R73H P177*",2
"lib2","SARS-CoV-2","GATAATAGGCTTAATT",1,23.41,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C49P V77P K94P F99L G155S G172A",6
"lib2","SARS-CoV-2","GATAATAGTACAGGGG",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L188T P197M",2
"lib2","SARS-CoV-2","GATAATAGTGTGGAGG",1,6.51,6.7,-4.13,2,1.5,1.01,0.03,">1 nonsynonymous","G86S F99Y",2
"lib2","SARS-CoV-2","GATAATATAGCAACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R Y35R S41T S113I",4
"lib2","SARS-CoV-2","GATAATATGCAGAAAC",1,10.59,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y39R P54R F62G C102M N110V Y121I",6
"lib2","SARS-CoV-2","GATAATCAGTACCATG",5,0,NA,NA,NA,NA,NA,NA,"stop","G51* G166M",2
"lib2","SARS-CoV-2","GATAATCAGTATCGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* C61M S113H P149R L162M",5
"lib2","SARS-CoV-2","GATAATCATAACTAGC",5,24.25,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F99P R127H",2
"lib2","SARS-CoV-2","GATAATCATCAACCAA",2,16.08,6.33,-4.5,0.78,1.5,1.15,0.04,">1 nonsynonymous","N4D A33V Y39A Y123C L162T",5
"lib2","SARS-CoV-2","GATAATCCAAGGCGGC",3,49.71,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","G146A R179L",2
"lib2","SARS-CoV-2","GATAATCCATTTTAAG",2,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T D112L",2
"lib2","SARS-CoV-2","GATAATCCTAATGAAC",1,26.35,10.64,-0.2,0.05,3,1.01,0,">1 nonsynonymous","L5T K114I T201M",3
"lib2","SARS-CoV-2","GATAATCGTCGTCAAC",4,580.48,10.54,-0.29,0.02,2.94,1.02,0,">1 nonsynonymous","N130L S139A",2
"lib2","SARS-CoV-2","GATAATGAACTTCTAT",5,77.62,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Q79G G86Q I142G N157K G174R",5
"lib2","SARS-CoV-2","GATAATGAAGAGCTGA",1,3.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","GATAATGAGATGCGAG",5,89.39,10.79,-0.04,0.05,2.9,1.08,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","GATAATGAGTAGTGTT",25,312.88,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V11P Y35V G86Y K128T F156A",5
"lib2","SARS-CoV-2","GATAATGCAGGGCACT",11,1.84,NA,NA,NA,NA,NA,NA,"stop","A33P N109A S129D Y165*",4
"lib2","SARS-CoV-2","GATAATGTATCTGCTA",15,213.73,10.72,-0.12,0.02,2.96,1.04,0,">1 nonsynonymous","D98T Q163L",2
"lib2","SARS-CoV-2","GATAATTAAGAAATAA",1,45.68,10.9,0.06,0.07,2.91,1.1,0,"1 nonsynonymous","T55E",1
"lib2","SARS-CoV-2","GATAATTAAGATTGGA",6,16.33,8.89,-1.94,0.15,1.5,1.1,0.02,">1 nonsynonymous","A42F W106E",2
"lib2","SARS-CoV-2","GATAATTAGTACACCA",13,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94T G152I T201R",3
"lib2","SARS-CoV-2","GATAATTCGCGTCTCT",9,1.35,NA,NA,NA,NA,NA,NA,"stop","V115* K198N",2
"lib2","SARS-CoV-2","GATAATTGAACAACAG",4,93.4,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P133L S139I F167I T201A",4
"lib2","SARS-CoV-2","GATAATTGAAGCGTTA",7,100.29,10.85,0.02,0.07,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAATTGAGATGTGA",3,78.71,10.85,0.02,0.05,2.95,1.06,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","GATAATTGCACTAATG",7,129.43,10.6,-0.23,0.04,3,1.01,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","GATAATTGCAGGCCCA",2,37.25,10.02,-0.81,0.11,2.45,1.06,0.01,">1 nonsynonymous","A14T T63L Q144A",3
"lib2","SARS-CoV-2","GATAATTGCTCTGGAA",5,85.17,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L38S V52I N110Q R127C G146V",5
"lib2","SARS-CoV-2","GATAATTGGCCATTGC",7,61.69,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27G C61S R124D N157P",4
"lib2","SARS-CoV-2","GATAATTTGACACTTG",5,71.9,10.65,-0.18,0.05,3,1.03,0,"1 nonsynonymous","V115S",1
"lib2","SARS-CoV-2","GATACAAAAAAGTTTA",5,103.35,10.2,-0.63,0.05,2.7,1.08,0,">1 nonsynonymous","R16T C61V S139Y",3
"lib2","SARS-CoV-2","GATACAAAAATGCATA",12,171.23,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V65E I72K",2
"lib2","SARS-CoV-2","GATACAAAACTGATTT",1,0.48,NA,NA,NA,NA,NA,NA,"stop","V37G Y39D F62H E154*",4
"lib2","SARS-CoV-2","GATACAAAAGAAATCA",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54I T148E",2
"lib2","SARS-CoV-2","GATACAAAATTCCATT",4,73.99,10.52,-0.31,0.04,2.93,1.04,0,">1 nonsynonymous","Q163K S184R A190P",3
"lib2","SARS-CoV-2","GATACAAACAACAAAA",7,253.35,9.16,-1.68,0.07,2.69,1.1,0,">1 nonsynonymous","C6S K87G",2
"lib2","SARS-CoV-2","GATACAAACAACAGAT",5,79.95,8.36,-2.47,0.16,1.5,1.15,0.01,">1 nonsynonymous","F8P D59L K87S K198H",4
"lib2","SARS-CoV-2","GATACAAAGAAGGCTA",6,129.91,10.79,-0.05,0.05,2.88,1.11,0,">1 nonsynonymous","I2K N64G",2
"lib2","SARS-CoV-2","GATACAAATGAGGATA",2,0.62,NA,NA,NA,NA,NA,NA,"stop","G9K Y39* Q79T F126R",4
"lib2","SARS-CoV-2","GATACAAATTACTACG",4,13.15,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C49R L162R",2
"lib2","SARS-CoV-2","GATACAAATTCAGAGA",1,17.32,10.96,0.12,0.06,3,1.01,0,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","GATACAACATAATCCA",13,226.36,10.66,-0.18,0.03,2.93,1.06,0,">1 nonsynonymous","T63V E141G",2
"lib2","SARS-CoV-2","GATACAAGAAAAAGTG",4,53.66,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56C R124H G146I",3
"lib2","SARS-CoV-2","GATACAAGACACTCAT",11,155.53,10.53,-0.3,0.02,2.96,1.03,0,">1 nonsynonymous","D97T K128N T140V V153M",4
"lib2","SARS-CoV-2","GATACAAGACCAATAA",1,58.09,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","V11R A18V N30G D98G V153K",5
"lib2","SARS-CoV-2","GATACAAGATAAGGAA",6,115.18,8,-2.84,0.13,2.38,1.1,0.01,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","GATACAAGCGAGAAAG",12,210.05,9.91,-0.92,0.03,2.08,1.03,0,">1 nonsynonymous","V77R N171I",2
"lib2","SARS-CoV-2","GATACAATAACCGGCG",4,46.19,10.78,-0.06,0.05,2.98,1.04,0,">1 nonsynonymous","F62S P197R",2
"lib2","SARS-CoV-2","GATACACAAAAGAGGT",2,51.58,9.36,-1.47,0.03,2.96,1.05,0,">1 nonsynonymous","T100C Y119M",2
"lib2","SARS-CoV-2","GATACACAAACCCGAA",4,31.81,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I28S P161H",2
"lib2","SARS-CoV-2","GATACACAACAACTTT",11,3.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C G152T",2
"lib2","SARS-CoV-2","GATACACAACTATTCG",3,46.24,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","P96F S139R S200D",3
"lib2","SARS-CoV-2","GATACACAAGTTGCCA",3,20.17,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V32A A42R D97I Y119P E135W P161Y R179L",7
"lib2","SARS-CoV-2","GATACACAATTCTATG",1,44.24,10.78,-0.06,0.05,2.94,1.07,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","GATACACCCGAATAAC",12,105.56,6,-4.84,2,3,1.2,0,">1 nonsynonymous","G101Q Q163F",2
"lib2","SARS-CoV-2","GATACACCTCATCGAA",13,204.09,10.09,-0.74,0.05,2.57,1.04,0,">1 nonsynonymous","L5F K56N D98I V173Y T201S",5
"lib2","SARS-CoV-2","GATACACGCAATTCCG",5,37.13,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","K48R L60S L183S",3
"lib2","SARS-CoV-2","GATACACGCTTCAATG",2,9.68,10.27,-0.56,0.11,2.81,1,0,">1 nonsynonymous","C61S D97G N120L",3
"lib2","SARS-CoV-2","GATACACGGTTGAGTC",2,26.53,6.15,-4.68,1.17,1.5,1.1,0.07,">1 nonsynonymous","P54S D90I V103W P149Q",4
"lib2","SARS-CoV-2","GATACACGTACGAGGC",8,97.07,10.35,-0.48,0.03,2.95,1.03,0,">1 nonsynonymous","C61L T85Y",2
"lib2","SARS-CoV-2","GATACAGAAAAAGTGC",5,112.7,10.83,-0.01,0.08,2.93,1.09,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","GATACAGAAATATCTG",7,109.28,10.75,-0.08,0.03,2.97,1.05,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","GATACAGAGTTACAGA",1,48.44,10.93,0.09,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GATACAGCTGTCGGCC",15,71.42,7.05,-3.79,0.33,1.5,1.18,0.02,">1 nonsynonymous","W106R K128H G146C",3
"lib2","SARS-CoV-2","GATACAGGGGAAACAT",6,67.98,10.1,-0.73,0.06,2.78,1.02,0,">1 nonsynonymous","P7T Y66L S184W A190P",4
"lib2","SARS-CoV-2","GATACAGGTAGGCGCA",17,52.31,6.6,-4.24,0.57,1.5,1.29,0.04,">1 nonsynonymous","N30I A42F P96H K114W N171Y",5
"lib2","SARS-CoV-2","GATACAGGTGGCTAGT",29,184.65,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12D S45R V77T N120R",4
"lib2","SARS-CoV-2","GATACAGTATAGATGT",8,62.87,9.69,-1.15,0.09,2.77,1.13,0,">1 nonsynonymous","D97L N118T",2
"lib2","SARS-CoV-2","GATACAGTTGATTTAA",3,82.36,10.06,-0.77,0.07,2.53,1.03,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","GATACATAACGTTTTG",2,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93H F99A I104P",3
"lib2","SARS-CoV-2","GATACATACAAAATCG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","G101W G117* I142P",3
"lib2","SARS-CoV-2","GATACATACGTGTCTA",4,31.52,8.34,-2.5,0.36,1.5,1.03,0.04,">1 nonsynonymous","S45M T100I R127S K132L P149Q",5
"lib2","SARS-CoV-2","GATACATATCAAAACC",1,28.51,10.15,-0.69,0.07,2.89,1.01,0,"1 nonsynonymous","G155F",1
"lib2","SARS-CoV-2","GATACATCAACTAACT",2,0,NA,NA,NA,NA,NA,NA,"stop","S53P L60F S200*",3
"lib2","SARS-CoV-2","GATACATCCCAAACGT",6,15.6,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","C6S A14V I88A S139H P149G",5
"lib2","SARS-CoV-2","GATACATTAAGCGCTA",7,2.61,NA,NA,NA,NA,NA,NA,"stop","G83F D97C K114V D137R L162*",5
"lib2","SARS-CoV-2","GATACATTCTTCACTA",2,53.17,10.79,-0.04,0.05,2.92,1.09,0,">1 nonsynonymous","D59A K199F",2
"lib2","SARS-CoV-2","GATACCAAAAAACCGG",2,19.24,6,-4.84,1.47,3,1.36,0.02,">1 nonsynonymous","N40A K56V I104L R127Q",4
"lib2","SARS-CoV-2","GATACCAAACACTTTC",6,78.67,10.5,-0.34,0.04,3,1.01,0,">1 nonsynonymous","T55D N64R A89S",3
"lib2","SARS-CoV-2","GATACCAAACTTTGGT",8,509.36,9.24,-1.6,0.03,2.96,1.07,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","GATACCAAATCCTAGC",9,66.36,6.63,-4.21,0.29,1.5,1.14,0.01,">1 nonsynonymous","N4E Y50T T55H A89V",4
"lib2","SARS-CoV-2","GATACCAAATCGCACT",5,79.61,8.8,-2.03,0.21,1.5,1,0.02,">1 nonsynonymous","F44P V77R E141L",3
"lib2","SARS-CoV-2","GATACCAACACTAAAC",28,100.02,6.31,-4.53,0.76,1.5,1.32,0.03,">1 nonsynonymous","E10V C61D K87G V103E",4
"lib2","SARS-CoV-2","GATACCAACATTGGAC",2,20,8.71,-2.12,0.17,1.87,1.05,0.02,">1 nonsynonymous","F8P Y35S",2
"lib2","SARS-CoV-2","GATACCAACGTGCGAA",8,126.26,10.36,-0.47,0.05,2.96,1.05,0,">1 nonsynonymous","K87I T100L G152Q",3
"lib2","SARS-CoV-2","GATACCAAGAGACACA",1,47.28,10.18,-0.66,0.1,2.66,1.25,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","GATACCACGAACCAAA",4,7.15,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","S41R S45G K56W Q84R F99P Q144S G152C",7
"lib2","SARS-CoV-2","GATACCACTAAAACAG",4,22.05,10.22,-0.62,0.09,2.01,1.06,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","GATACCAGCAACACTC",2,15.98,6,-4.84,2,2.57,1.1,0.01,">1 nonsynonymous","S19R D137H",2
"lib2","SARS-CoV-2","GATACCAGGGTCGAGT",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L N64R I80E A190Y",4
"lib2","SARS-CoV-2","GATACCATAACGTAAT",2,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P V20R P96W",3
"lib2","SARS-CoV-2","GATACCATAATCGACT",3,111.63,8.46,-2.38,0.15,2.64,1.01,0.01,">1 nonsynonymous","N40P N110T N157H",3
"lib2","SARS-CoV-2","GATACCATACCCACGT",2,27.56,9.56,-1.27,0.17,1.74,1.02,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","GATACCATCGATTTAT",3,39.04,6.22,-4.62,0.74,1.5,1.24,0.02,">1 nonsynonymous","D98S S139P T170K V181N",4
"lib2","SARS-CoV-2","GATACCATTCCAATAC",7,3.64,NA,NA,NA,NA,NA,NA,"stop","G51F P149*",2
"lib2","SARS-CoV-2","GATACCCAACGGTTGA",1,34.09,7.34,-3.5,0.28,1.5,1.06,0.02,">1 nonsynonymous","L38N A89H",2
"lib2","SARS-CoV-2","GATACCCATTAATCGT",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y P96T",2
"lib2","SARS-CoV-2","GATACCCATTTTTAGA",2,44.15,10.31,-0.53,0.04,2.9,1.08,0,">1 nonsynonymous","P7V S41Y N110G",3
"lib2","SARS-CoV-2","GATACCCCACTGATGC",6,83.68,9.97,-0.87,0.05,2.25,1.01,0,">1 nonsynonymous","P133S E141F K199E",3
"lib2","SARS-CoV-2","GATACCCCCAGTAATA",4,47.26,9.94,-0.89,0.06,2.65,1.02,0,">1 nonsynonymous","C61A F70M",2
"lib2","SARS-CoV-2","GATACCCCCCAAATAC",10,139.29,10.22,-0.61,0.05,2.75,1.08,0,"1 nonsynonymous","N24L",1
"lib2","SARS-CoV-2","GATACCCCCTCACACA",2,39.17,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F12S S113H",2
"lib2","SARS-CoV-2","GATACCCGAAGCACAG",12,154.06,8.41,-2.43,0.08,1.96,1.08,0,">1 nonsynonymous","T55F Q84L N110K I142E",4
"lib2","SARS-CoV-2","GATACCCGAGTGTGAG",1,18.1,9.31,-1.53,0.09,2.7,1.02,0,">1 nonsynonymous","F44A K132V T170A",3
"lib2","SARS-CoV-2","GATACCCGCGCAAAAA",8,2.85,NA,NA,NA,NA,NA,NA,"stop","I28L I88Q W106R G155*",4
"lib2","SARS-CoV-2","GATACCCTGATCCTTC",9,0.79,NA,NA,NA,NA,NA,NA,"stop","N4D Y35K K48E G83N S113* L162T",6
"lib2","SARS-CoV-2","GATACCCTGCAGTACG",3,11.32,8.43,-2.41,0.19,2.12,1.13,0.01,">1 nonsynonymous","V77A G155E",2
"lib2","SARS-CoV-2","GATACCCTTGATACAG",1,54.37,10.78,-0.05,0.06,2.96,1.08,0,"1 nonsynonymous","K132M",1
"lib2","SARS-CoV-2","GATACCGAGATAAATA",5,39.25,10.92,0.08,0.06,2.97,1.01,0,">1 nonsynonymous","V37Q L111Q",2
"lib2","SARS-CoV-2","GATACCGATGTCTAAC",5,124.54,10.12,-0.71,0.06,2.62,1.06,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","GATACCGCCCTAAAAA",2,1.43,NA,NA,NA,NA,NA,NA,"stop","T3E S45L W106I N151*",4
"lib2","SARS-CoV-2","GATACCGCGCCCTGAT",13,41.51,6,-4.84,2,3,1.44,0.02,">1 nonsynonymous","K26S V65T F99S I104E",4
"lib2","SARS-CoV-2","GATACCGGCTCAAGAT",6,57.32,7.79,-3.05,0.36,1.5,1.04,0.05,">1 nonsynonymous","N64S N107Y",2
"lib2","SARS-CoV-2","GATACCGTTAGAAAAT",1,9.89,10.11,-0.73,0.05,2.95,1,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","GATACCTAATTTACTA",3,13.6,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L95N S129Q",2
"lib2","SARS-CoV-2","GATACCTCAAAACGTT",14,375.77,10.57,-0.27,0.04,2.92,1.06,0,">1 nonsynonymous","K128D Y178M",2
"lib2","SARS-CoV-2","GATACCTGCGTCCTTG",4,0,NA,NA,NA,NA,NA,NA,"stop","T55M Y121I E135*",3
"lib2","SARS-CoV-2","GATACCTTACTAGATC",3,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V G101K T140R G155W Y178L",5
"lib2","SARS-CoV-2","GATACGAAAAGAGAGG",3,91.97,9.2,-1.64,0.12,2.13,1.08,0.01,">1 nonsynonymous","S43R P133D G155H",3
"lib2","SARS-CoV-2","GATACGAAGATAACTA",2,55.47,10.82,-0.02,0.06,2.98,1.05,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","GATACGAAGATCCGAC",7,21.08,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","V20R P149F",2
"lib2","SARS-CoV-2","GATACGAATGCATCCG",4,114.69,10,-0.83,0.07,2.78,1.01,0,">1 nonsynonymous","N58T R78Y F134L",3
"lib2","SARS-CoV-2","GATACGACCACTCCGC",4,114.65,10.16,-0.68,0.03,2.84,1,0,">1 nonsynonymous","V37C F62H E141G",3
"lib2","SARS-CoV-2","GATACGACGGTGCCAA",5,50.85,6,-4.84,1.85,1.5,1.18,0.02,">1 nonsynonymous","P7L C102Y D137A G152A",4
"lib2","SARS-CoV-2","GATACGAGCCTCTCTA",6,271.76,8.68,-2.15,0.07,2.89,1.04,0,">1 nonsynonymous","E10M Y119I",2
"lib2","SARS-CoV-2","GATACGAGGGAAAAAG",2,30.5,8.96,-1.88,0.13,2.09,1.1,0.01,">1 nonsynonymous","C6L D98S T170S",3
"lib2","SARS-CoV-2","GATACGATAAAATAGA",8,0.62,NA,NA,NA,NA,NA,NA,"stop","L60* K87G S113L K199L",4
"lib2","SARS-CoV-2","GATACGATAGTGAAAT",9,78.9,10.8,-0.04,0.05,2.97,1.06,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GATACGATTTCCAAGA",10,77.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S69T L95T Y165K",3
"lib2","SARS-CoV-2","GATACGCAAATATTAC",3,6.97,6,-4.84,2,3,1.21,0.03,">1 nonsynonymous","V103H G166Q",2
"lib2","SARS-CoV-2","GATACGCAAGACGACG",13,196.8,9.91,-0.93,0.04,2.79,1.05,0,">1 nonsynonymous","S45R E154N N171A",3
"lib2","SARS-CoV-2","GATACGCACATGCTGT",3,14.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91R Y121Q C158T",3
"lib2","SARS-CoV-2","GATACGCATTAATTAC",8,66.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G101M F134N Y178R",3
"lib2","SARS-CoV-2","GATACGCATTCTTTTC",15,109.13,6.05,-4.79,0.52,1.5,1.15,0.01,">1 nonsynonymous","C6Y F70P G83C D90G D112I R124I T201D",7
"lib2","SARS-CoV-2","GATACGCGAACCAAAT",5,121.05,10.63,-0.21,0.04,2.88,1.1,0,">1 nonsynonymous","A42I S184T",2
"lib2","SARS-CoV-2","GATACGCGTGCCCCAT",3,32.66,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V20M A22S G86H K128A",4
"lib2","SARS-CoV-2","GATACGCTAACCAAGT",4,48.82,10.62,-0.22,0.04,2.91,1.07,0,">1 nonsynonymous","T55C T201S",2
"lib2","SARS-CoV-2","GATACGCTATCGATGC",5,72,10.8,-0.03,0.05,3,1.02,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","GATACGCTGGACCAAG",3,84.07,9.88,-0.95,0.05,2.85,1.06,0,">1 nonsynonymous","S43T G146T",2
"lib2","SARS-CoV-2","GATACGCTGTATACCT",3,86.73,10.54,-0.29,0.05,2.87,1.11,0,">1 nonsynonymous","S43N F62C",2
"lib2","SARS-CoV-2","GATACGGCAACAAACA",2,0.2,NA,NA,NA,NA,NA,NA,"stop","W106* R136* N151I",3
"lib2","SARS-CoV-2","GATACGGGAAGAATAT",6,22.75,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F8S F62R P82S I104S",4
"lib2","SARS-CoV-2","GATACGGGCCTCGATG",4,41.15,10.24,-0.59,0.13,2.76,1.01,0.01,">1 nonsynonymous","L60D T100V N120L",3
"lib2","SARS-CoV-2","GATACGGTGGGCTGAC",16,215.57,10.43,-0.41,0.05,2.8,1.07,0,">1 nonsynonymous","L60Y D98T A105S A190C",4
"lib2","SARS-CoV-2","GATACGGTGGGCTGTT",8,0.67,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib2","SARS-CoV-2","GATACGTAAGGTGCTT",4,63.5,10.45,-0.39,0.06,2.87,1.1,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","GATACGTAATTATGGT",7,98.65,6.93,-3.9,0.25,1.5,1.05,0.01,">1 nonsynonymous","Y159V F167Y",2
"lib2","SARS-CoV-2","GATACGTTCCCGTACA",15,253.63,9.77,-1.07,0.06,2.5,1.03,0,">1 nonsynonymous","A105M I138D",2
"lib2","SARS-CoV-2","GATACTAAAAGGCCTA",3,5.44,9.7,-1.13,0.29,1.95,1,0.02,">1 nonsynonymous","S41E F47V Y91R V153S",4
"lib2","SARS-CoV-2","GATACTAAACACCGCT",6,0.46,NA,NA,NA,NA,NA,NA,"stop","T55M A89* P96H S113E F156Y",5
"lib2","SARS-CoV-2","GATACTAAAGCTCCAT",7,47.89,9.5,-1.34,0.11,1.83,1.07,0,">1 nonsynonymous","A14G R27K Y39R A89G",4
"lib2","SARS-CoV-2","GATACTAACGATTCCG",4,79.09,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D34L N118V D137N",3
"lib2","SARS-CoV-2","GATACTAATAAGTGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K94* L122R N171I",3
"lib2","SARS-CoV-2","GATACTAATCATCCCT",10,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T G155I",2
"lib2","SARS-CoV-2","GATACTAGACAGCTTT",17,194.81,8.62,-2.21,0.08,2.83,1.05,0,">1 nonsynonymous","N171P C195F",2
"lib2","SARS-CoV-2","GATACTAGAGATTTGC",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72N Q168M",2
"lib2","SARS-CoV-2","GATACTAGTGCGCAAT",7,2.04,NA,NA,NA,NA,NA,NA,"stop","V65* T100M N107L L131N",4
"lib2","SARS-CoV-2","GATACTATAATTGGTT",2,57.24,8.58,-2.26,0.2,1.5,1.13,0.02,">1 nonsynonymous","F62I R124S N130K",3
"lib2","SARS-CoV-2","GATACTATCTATAATG",5,579.26,10.59,-0.25,0.02,2.92,1.05,0,">1 nonsynonymous","L131I T148F F160S",3
"lib2","SARS-CoV-2","GATACTATGAACACTT",2,55.57,9.55,-1.28,0.09,2.3,1,0,">1 nonsynonymous","K87W E135V",2
"lib2","SARS-CoV-2","GATACTATGATAGAAA",15,87.64,10.84,0.01,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GATACTATTACGACCA",2,33.59,10.73,-0.1,0.06,2.96,1.03,0,">1 nonsynonymous","L5W Y66M",2
"lib2","SARS-CoV-2","GATACTCACACCTATA",1,1.27,NA,NA,NA,NA,NA,NA,"stop","A18T D59M D90* N120F Y143I P169A",6
"lib2","SARS-CoV-2","GATACTCCAAAATTAC",7,47.98,6.67,-4.17,0.4,1.5,1.13,0.01,">1 nonsynonymous","Y50D Q84M S164F",3
"lib2","SARS-CoV-2","GATACTCCCACAATGA",9,88.22,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C31L K87S S139W A192T",4
"lib2","SARS-CoV-2","GATACTCGAACCACTA",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11K L162H",2
"lib2","SARS-CoV-2","GATACTCGGTAACAAA",2,65.53,10.75,-0.09,0.04,2.98,1.04,0,">1 nonsynonymous","L122M P149C",2
"lib2","SARS-CoV-2","GATACTCGTATAACGC",1,0.11,NA,NA,NA,NA,NA,NA,"stop","A14H K48* A105L I142S",4
"lib2","SARS-CoV-2","GATACTGAAACACATA",2,34.37,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","I2P K94T S113R S129K",4
"lib2","SARS-CoV-2","GATACTGACCTTTTTT",2,49.99,10.82,-0.02,0.04,2.95,1.07,0,">1 nonsynonymous","Y35F G152R",2
"lib2","SARS-CoV-2","GATACTGACTCTTGTA",10,148.24,10.43,-0.41,0.04,2.8,1.05,0,">1 nonsynonymous","W106R L122A",2
"lib2","SARS-CoV-2","GATACTGAGTGCCAAC",29,414.78,10.24,-0.6,0.02,2.96,1.06,0,">1 nonsynonymous","F156L Q163S",2
"lib2","SARS-CoV-2","GATACTGCGTCTGCTT",3,29.92,10.65,-0.19,0.07,2.9,1.07,0,">1 nonsynonymous","S129Q I138Y",2
"lib2","SARS-CoV-2","GATACTGTAAAATAGT",19,234.22,10.83,0,0.05,2.93,1.08,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","GATACTGTGAGCAAAA",4,6.72,9.28,-1.55,0.27,1.67,1.03,0.02,">1 nonsynonymous","L5T R127G F134S",3
"lib2","SARS-CoV-2","GATACTTAAAGGTGTG",8,78.52,10.3,-0.54,0.05,2.8,1.08,0,"1 nonsynonymous","Y165F",1
"lib2","SARS-CoV-2","GATACTTAATATCACA",5,227.34,9.1,-1.74,0.06,2.45,1.07,0,">1 nonsynonymous","T55A K128N Q176L T201A",4
"lib2","SARS-CoV-2","GATACTTCGCTGCAAA",5,41.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L57Y S69R R78F Y93R R127C E135R N157L",7
"lib2","SARS-CoV-2","GATACTTGCAAATGAG",5,9.11,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","K94P C102F T140N Q168S",4
"lib2","SARS-CoV-2","GATACTTGTTCCCTTT",8,114.6,10.79,-0.05,0.05,2.89,1.1,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","GATACTTTACCAGATA",10,59.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P149N G174F V181E",3
"lib2","SARS-CoV-2","GATACTTTTCCATCAC",3,2.38,NA,NA,NA,NA,NA,NA,"stop","R78* L122M F156S",3
"lib2","SARS-CoV-2","GATAGAAAAACGTATA",3,16.52,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V11L I138W G146L",3
"lib2","SARS-CoV-2","GATAGAAAAATACGTA",2,20.9,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","T3F K128M N157T V182L",4
"lib2","SARS-CoV-2","GATAGAAACAACATCT",5,86.08,10.38,-0.46,0.04,2.97,1.06,0,">1 nonsynonymous","K114E F160I",2
"lib2","SARS-CoV-2","GATAGAAACAAGCCGT",9,179.42,9.47,-1.37,0.04,2.92,1.09,0,">1 nonsynonymous","N4K Y119N",2
"lib2","SARS-CoV-2","GATAGAAACAATAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* A14L A42S P96C",4
"lib2","SARS-CoV-2","GATAGAAACATACTGT",1,11.59,10.71,-0.12,0.05,3,1.01,0,">1 nonsynonymous","R27T S139R",2
"lib2","SARS-CoV-2","GATAGAAAGCCAACCG",2,6.44,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F47A N58R Y121L R136S",4
"lib2","SARS-CoV-2","GATAGAAATCCAAACC",11,169.28,6.03,-4.81,1.34,1.5,1.18,0.03,">1 nonsynonymous","C6H K48N P177L",3
"lib2","SARS-CoV-2","GATAGAACCGCCGATC",2,18.09,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V52Q V65G V71A G83S T201A",5
"lib2","SARS-CoV-2","GATAGAACGTAGAATA",10,262.93,10.04,-0.8,0.07,2.45,1.04,0,">1 nonsynonymous","V37T F99M K198F",3
"lib2","SARS-CoV-2","GATAGAACTAGTTACT",5,118.68,10.28,-0.56,0.03,2.93,1.02,0,">1 nonsynonymous","N24K L60V G83Q N130F",4
"lib2","SARS-CoV-2","GATAGAAGAAGCAGTT",5,134.16,10.6,-0.23,0.04,2.88,1.11,0,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","GATAGAAGTCGAAACT",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82N T201M",2
"lib2","SARS-CoV-2","GATAGAATACATAGAT",1,12.77,8.59,-2.24,0.19,2.64,1,0.01,">1 nonsynonymous","F44P R73A P169K",3
"lib2","SARS-CoV-2","GATAGAATACGATGCT",14,0,NA,NA,NA,NA,NA,NA,"stop","S43D Y66* L111I R179*",4
"lib2","SARS-CoV-2","GATAGAATAGCAAAGG",4,57.54,7.21,-3.63,0.15,1.5,1.09,0.01,">1 nonsynonymous","D34C S45T L95I Y175S H189Q T201F",6
"lib2","SARS-CoV-2","GATAGAATCTGACGCG",4,0.23,NA,NA,NA,NA,NA,NA,"stop","D112K S200*",2
"lib2","SARS-CoV-2","GATAGAATGGTATAAA",2,6.52,10.67,-0.16,0.12,2.8,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GATAGACAACAATCCT",3,48.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15A S45G D68L Y121W L183C",5
"lib2","SARS-CoV-2","GATAGACAAGAGTCGC",8,90.62,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L38W G172R",2
"lib2","SARS-CoV-2","GATAGACACCGCACCC",4,18.87,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S43T Y93D W106D Y119I G146V",5
"lib2","SARS-CoV-2","GATAGACAGCCCAGCA",16,47.08,9.55,-1.29,0.08,1.86,1.05,0,">1 nonsynonymous","S43A C49Y D97K P197R",4
"lib2","SARS-CoV-2","GATAGACAGGCTAATG",4,0.62,NA,NA,NA,NA,NA,NA,"stop","V71* T140W Y159S P169I",4
"lib2","SARS-CoV-2","GATAGACTAAATTTCA",14,233.88,8.17,-2.66,0.11,2.22,1.07,0,">1 nonsynonymous","S45C F126R Q168S",3
"lib2","SARS-CoV-2","GATAGACTACCTTGCT",2,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103M S113P G155V",3
"lib2","SARS-CoV-2","GATAGAGAAAAAGACC",13,1,NA,NA,NA,NA,NA,NA,"stop","S41C L60M Y121* Y165T",4
"lib2","SARS-CoV-2","GATAGAGAAATAACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1M V77* F134G T148N",4
"lib2","SARS-CoV-2","GATAGAGAATACCCTT",8,5.49,NA,NA,NA,NA,NA,NA,"stop","Y39* T63I P191Q",3
"lib2","SARS-CoV-2","GATAGAGGGAGTATAG",5,31.41,6,-4.84,1.33,3,1.15,0.01,">1 nonsynonymous","V103Y K128Q F160V S184Y",4
"lib2","SARS-CoV-2","GATAGAGTAAACTGCG",7,404.61,10.21,-0.63,0.02,2.96,1.03,0,">1 nonsynonymous","L60V V115G",2
"lib2","SARS-CoV-2","GATAGATACCTACTCA",5,15.46,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","R136C Y165I",2
"lib2","SARS-CoV-2","GATAGATATGTGGGCT",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M P197G",2
"lib2","SARS-CoV-2","GATAGATCCATGAAAA",9,103.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10P C61T S108D S147P E154H",5
"lib2","SARS-CoV-2","GATAGATGAAGCTGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T63S D90H Q168N V173*",4
"lib2","SARS-CoV-2","GATAGATGTACACCAG",5,87.2,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27A G86V N120H",3
"lib2","SARS-CoV-2","GATAGATGTATGAGAG",2,7.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G9L T15F L95V F167C",4
"lib2","SARS-CoV-2","GATAGATTCCAAACGC",3,67.47,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A14N D98F S147Y G172E",4
"lib2","SARS-CoV-2","GATAGATTTTGGGCCA",1,0.19,NA,NA,NA,NA,NA,NA,"stop","G51T Y91P F99S F126* Y178L",5
"lib2","SARS-CoV-2","GATAGCAAAACCAAAA",1,23.98,10.89,0.05,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAGCAAACTCAAAC",1,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F156P",1
"lib2","SARS-CoV-2","GATAGCACAAAACCAT",9,101.43,10.14,-0.7,0.04,2.87,1.01,0,">1 nonsynonymous","A14E N120L P191D",3
"lib2","SARS-CoV-2","GATAGCACAAGCGTAT",5,35.96,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A81Y L183A K199M",3
"lib2","SARS-CoV-2","GATAGCAGATAAATAT",7,39.5,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C49V T55Q N107L Y119K L131I",5
"lib2","SARS-CoV-2","GATAGCAGTATCAAAG",4,64.77,10.43,-0.41,0.05,2.88,1.14,0,">1 nonsynonymous","N4D E10M V153T",3
"lib2","SARS-CoV-2","GATAGCAGTCATTAAC",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V G83A S113H E141T S147F",5
"lib2","SARS-CoV-2","GATAGCATATACTATA",1,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V A81S L187W",3
"lib2","SARS-CoV-2","GATAGCCAAAATATGG",4,70.56,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9K R25C Q144E P177N L187S",5
"lib2","SARS-CoV-2","GATAGCCACCCTTAAA",6,55.91,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48G A105M K128L",3
"lib2","SARS-CoV-2","GATAGCCCGTAAAAAA",3,11.09,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","P161L R179I",2
"lib2","SARS-CoV-2","GATAGCCGACACTAAA",6,40.74,10.01,-0.83,0.19,1.96,1,0.01,">1 nonsynonymous","N58M A81L",2
"lib2","SARS-CoV-2","GATAGCCGCGATTGTA",3,35.61,9.07,-1.76,0.22,1.5,1,0.02,">1 nonsynonymous","G9Y F70L",2
"lib2","SARS-CoV-2","GATAGCCTGTAAGGTT",2,23.95,6.16,-4.67,1.34,1.5,1.14,0.07,">1 nonsynonymous","C49P C158I Y165L",3
"lib2","SARS-CoV-2","GATAGCCTTAAGTAAT",5,133.32,10.9,0.06,0.06,2.94,1.07,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","GATAGCGGAATGGGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* S53L D90H",3
"lib2","SARS-CoV-2","GATAGCTAATACGGCA",9,11.83,NA,NA,NA,NA,NA,NA,"stop","S43I G86* N107Y D137R Y175T",5
"lib2","SARS-CoV-2","GATAGCTAGCGAAAAG",14,99.33,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C102Y K114I N151T",3
"lib2","SARS-CoV-2","GATAGCTCTAGCCATG",2,28.57,10.51,-0.32,0.06,2.93,1.08,0,"1 nonsynonymous","F185L",1
"lib2","SARS-CoV-2","GATAGCTGGACAATTA",3,57.4,9.73,-1.1,0.07,2.49,1.04,0,">1 nonsynonymous","Y35V C49I K56Q N120E T201W",5
"lib2","SARS-CoV-2","GATAGCTGTGGGGAAA",8,0.29,NA,NA,NA,NA,NA,NA,"stop","N1* C61D Q84K",3
"lib2","SARS-CoV-2","GATAGGAACAATCCAG",3,74.61,9.62,-1.21,0.13,2.03,1.06,0.01,">1 nonsynonymous","N40H T46I Y121K",3
"lib2","SARS-CoV-2","GATAGGAAGCGTCCCA",5,21.45,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V32K D90N L95T Y119C G174K",5
"lib2","SARS-CoV-2","GATAGGACCCCGTAAG",1,22.53,8.87,-1.96,0.17,1.5,1.01,0.01,">1 nonsynonymous","A33R S43A C102F G196K",4
"lib2","SARS-CoV-2","GATAGGAGACGATACG",6,50.57,7.85,-2.99,0.24,1.5,1.09,0.02,">1 nonsynonymous","A89S F167L",2
"lib2","SARS-CoV-2","GATAGGATGATAGGAC",1,13.7,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C49Y R124P I142L S200F",4
"lib2","SARS-CoV-2","GATAGGCACATCAATT",12,207.06,10.09,-0.74,0.04,2.78,1.03,0,">1 nonsynonymous","S43H Y121W",2
"lib2","SARS-CoV-2","GATAGGCGTAAATTTA",1,0.6,NA,NA,NA,NA,NA,NA,"stop","Y35G F47* Y91F",3
"lib2","SARS-CoV-2","GATAGGCTCGCTGCGG",4,1.33,NA,NA,NA,NA,NA,NA,"stop","R27L D34F E135T Q176R T201*",5
"lib2","SARS-CoV-2","GATAGGGTTTATTAAT",21,241.26,10.82,-0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATAGTAAAAAAACAA",7,43.69,10.8,-0.04,0.07,2.81,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","GATAGTAAAGAAATAG",4,7.82,8.83,-2.01,0.17,1.93,1.04,0.01,">1 nonsynonymous","T15F W106R",2
"lib2","SARS-CoV-2","GATAGTAAGATGCCAC",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S N40K K56P N64Y P96T",5
"lib2","SARS-CoV-2","GATAGTAATGACCACA",3,114.01,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F62I I72R D90V Y175K",4
"lib2","SARS-CoV-2","GATAGTAATGATATTC",1,2.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATAGTACGAAAAACG",17,121.96,8.26,-2.58,0.18,1.5,1.04,0.01,"1 nonsynonymous","R127I",1
"lib2","SARS-CoV-2","GATAGTACTCTTAGGT",5,51.38,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N120L E154T F167I T201S",4
"lib2","SARS-CoV-2","GATAGTAGTAATTTAA",3,87.26,10.21,-0.62,0.04,2.95,1.06,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","GATAGTATGAACAATT",4,11.37,10.61,-0.23,0.11,2.86,1.15,0,">1 nonsynonymous","G9S N120L",2
"lib2","SARS-CoV-2","GATAGTATTGTGGTAC",3,59.93,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L57S N118F N157R",3
"lib2","SARS-CoV-2","GATAGTATTGTTCTCA",3,26.87,10.53,-0.31,0.09,2.9,1.13,0,">1 nonsynonymous","D98R F160G P197A",3
"lib2","SARS-CoV-2","GATAGTCAATCAACAA",7,82.48,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99M Y165D",2
"lib2","SARS-CoV-2","GATAGTCAATCCAGAC",13,94.06,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","GATAGTCACTTTTTAA",3,118.84,10.82,-0.01,0.06,2.9,1.1,0,">1 nonsynonymous","K56Q G83R",2
"lib2","SARS-CoV-2","GATAGTCAGCCAGTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R S129L E154I",3
"lib2","SARS-CoV-2","GATAGTCATACCTAAA",4,22.33,8.86,-1.97,0.17,1.5,1.01,0.02,">1 nonsynonymous","T63V V182S",2
"lib2","SARS-CoV-2","GATAGTCCGCTGTTGT",10,55.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43C L95K E154P P161R",4
"lib2","SARS-CoV-2","GATAGTCTATACCCAC",5,86.33,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K132S Q176P",2
"lib2","SARS-CoV-2","GATAGTCTCCCCCGAT",8,0.08,NA,NA,NA,NA,NA,NA,"stop","R25* S36C K94T",3
"lib2","SARS-CoV-2","GATAGTCTTACTCAAT",7,50,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S113Y N120L L162K",3
"lib2","SARS-CoV-2","GATAGTCTTACTGAAA",3,42.71,10.92,0.08,0.07,2.83,1.18,0,"1 nonsynonymous","K199Y",1
"lib2","SARS-CoV-2","GATAGTGAAGGTTTAA",7,139.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35D S45I S69L V103F P177D T201A",6
"lib2","SARS-CoV-2","GATAGTGTCAGAGCAA",7,131.77,10.55,-0.29,0.05,2.99,1.01,0,">1 nonsynonymous","N4C S139N",2
"lib2","SARS-CoV-2","GATAGTTAAATGCTAA",5,38.44,10.82,-0.02,0.02,2.97,1.05,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","GATAGTTAACTTCCTC",14,101.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45N K56A G86F",3
"lib2","SARS-CoV-2","GATAGTTAATGACAAA",12,138.29,10.55,-0.29,0.06,2.88,1.06,0,">1 nonsynonymous","I2F G9V N120K",3
"lib2","SARS-CoV-2","GATAGTTACATGGAAT",3,26.25,8.35,-2.49,0.22,1.99,1.13,0.01,">1 nonsynonymous","N157V T201M",2
"lib2","SARS-CoV-2","GATAGTTACGCTGATC",7,3.68,NA,NA,NA,NA,NA,NA,"stop","S129Y G146*",2
"lib2","SARS-CoV-2","GATAGTTCAGCCGAGT",8,106.86,10.27,-0.56,0.03,2.74,1.04,0,">1 nonsynonymous","A14G A33I",2
"lib2","SARS-CoV-2","GATAGTTCCAAACTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12N L122*",2
"lib2","SARS-CoV-2","GATAGTTCCGTTGTAA",8,61.4,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S19R I28A F167D",3
"lib2","SARS-CoV-2","GATAGTTTGCACGGCG",2,12.01,6,-4.84,2,3,1,0,">1 nonsynonymous","A89E N151P",2
"lib2","SARS-CoV-2","GATATAAAAAAAAATA",1,13.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S45E C61F K87P T100D F134V",5
"lib2","SARS-CoV-2","GATATAAAAAAAGACC",5,0.79,NA,NA,NA,NA,NA,NA,"stop","N1P P7L V37*",3
"lib2","SARS-CoV-2","GATATAAAAAGTTAGA",5,81.07,9.72,-1.12,0.12,2.02,1.04,0.01,">1 nonsynonymous","T63F Y91K",2
"lib2","SARS-CoV-2","GATATAAAAGCGAATG",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R D34R",2
"lib2","SARS-CoV-2","GATATAAAATTTTAGT",9,132.19,8.43,-2.41,0.09,2.87,1.03,0,">1 nonsynonymous","N110Q N157F",2
"lib2","SARS-CoV-2","GATATAAACTCTATGA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","C6L S41* D90L E141F",4
"lib2","SARS-CoV-2","GATATAAAGTAACACT",3,0,NA,NA,NA,NA,NA,NA,"stop","D90* D98Q",2
"lib2","SARS-CoV-2","GATATAAATAACCCGT",5,224.45,9.68,-1.15,0.09,2.18,1.04,0,"1 nonsynonymous","L162R",1
"lib2","SARS-CoV-2","GATATAAATCCGGCAT",2,24.46,9.98,-0.85,0.11,2.66,1,0.01,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","GATATAAATGCGTTTT",4,24.49,10.67,-0.17,0.07,2.86,1.16,0,">1 nonsynonymous","V32K N110T",2
"lib2","SARS-CoV-2","GATATAAATTAAATGG",5,1.98,NA,NA,NA,NA,NA,NA,"stop","D68* I88S K94C",3
"lib2","SARS-CoV-2","GATATAAATTCCACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L S36N A89F",3
"lib2","SARS-CoV-2","GATATAACCAGACTAC",8,51.05,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V77A V181Q",2
"lib2","SARS-CoV-2","GATATAACTGCATCAC",4,58.39,11.08,0.25,0.05,2.94,1.06,0,">1 nonsynonymous","V37F Q163L",2
"lib2","SARS-CoV-2","GATATAAGATTTTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* C49Q T100L F167M",4
"lib2","SARS-CoV-2","GATATAAGTAAGAGAA",2,10.01,10.95,0.12,0.09,2.91,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GATATAAGTAGTACCA",7,166.79,10.64,-0.19,0.03,2.92,1.06,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","GATATAAGTCTTGAGG",5,0.64,NA,NA,NA,NA,NA,NA,"stop","S19* K87G V173F G174P",4
"lib2","SARS-CoV-2","GATATAATAAAGGTAG",3,46.54,9.87,-0.97,0.08,2,1.01,0,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","GATATAATAGTGATCA",4,41.31,8.44,-2.4,0.2,1.5,1.08,0.02,"1 nonsynonymous","I88Q",1
"lib2","SARS-CoV-2","GATATAATGAAAATTG",14,235.41,10.65,-0.19,0.03,2.97,1.03,0,">1 nonsynonymous","N4K S41W N58P D97N",4
"lib2","SARS-CoV-2","GATATAATGTTAAAAA",6,122.98,10.01,-0.82,0.03,2.95,1.04,0,">1 nonsynonymous","N58K S113G",2
"lib2","SARS-CoV-2","GATATAATTAACAAGC",9,2.98,NA,NA,NA,NA,NA,NA,"stop","K48* N92M D112Y Y121M P133Q",5
"lib2","SARS-CoV-2","GATATACAATAAAAAT",4,84.1,10.8,-0.04,0.05,2.96,1.04,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GATATACACGAGAATA",11,108.69,6,-4.84,1.94,3,1.18,0,">1 nonsynonymous","A42M G101D S108T N157D",4
"lib2","SARS-CoV-2","GATATACCGCTACATA",1,7.18,9.36,-1.48,0.26,1.5,1.01,0.05,">1 nonsynonymous","L5M L60R Y121N N130C E154G P197K",6
"lib2","SARS-CoV-2","GATATACCTCTAATCA",1,5.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53N G166S V181K A190C",4
"lib2","SARS-CoV-2","GATATACTATACGAGC",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A L57F I104F C150G",4
"lib2","SARS-CoV-2","GATATAGAAAATACCT",3,66.03,10.79,-0.05,0.04,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATATAGACCGCCGGA",7,41.92,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A81P E135V",2
"lib2","SARS-CoV-2","GATATAGAGCATGCAT",2,65.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T63I A89E G152M",3
"lib2","SARS-CoV-2","GATATAGAGTGCCTTG",6,20.51,7.99,-2.84,0.29,1.5,1.12,0.03,">1 nonsynonymous","A14L W106E",2
"lib2","SARS-CoV-2","GATATAGATGTAGCTA",9,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25E C49R Y93P I104R G117I P177I",6
"lib2","SARS-CoV-2","GATATAGATGTTTCGC",11,195.11,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","G9L R25S R78P D98V P177S",5
"lib2","SARS-CoV-2","GATATAGATTCGTCTA",2,59.34,8.69,-2.14,0.08,2.73,1.08,0,">1 nonsynonymous","P54R S113R",2
"lib2","SARS-CoV-2","GATATAGCAGTCCCCT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","C31T C49Y G116Q I138A E154*",5
"lib2","SARS-CoV-2","GATATAGCTAGTACAA",3,50.84,10.89,0.05,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GATATAGGTTTTCGAA",1,10.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L D98E",2
"lib2","SARS-CoV-2","GATATATACACCAACA",1,11.06,9.73,-1.11,0.13,2.31,1.09,0.01,">1 nonsynonymous","A81L T201L",2
"lib2","SARS-CoV-2","GATATATATTGGGACT",5,5.75,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","G146L L183T",2
"lib2","SARS-CoV-2","GATATATCCTAGCAAA",1,7.78,10.96,0.12,0.03,2.94,1.07,0,"1 nonsynonymous","P54R",1
"lib2","SARS-CoV-2","GATATATGGACTCCAT",1,116.46,7.63,-3.21,0.1,1.61,1.08,0,">1 nonsynonymous","N40P P161D",2
"lib2","SARS-CoV-2","GATATATTTTACCTAT",10,118.59,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F12V I88A I138P T148F",4
"lib2","SARS-CoV-2","GATATCAAAGATCGTG",6,63.43,10.59,-0.25,0.05,2.97,1.02,0,">1 nonsynonymous","E10T I138V",2
"lib2","SARS-CoV-2","GATATCAACAGCACTG",1,65.03,9.65,-1.19,0.1,2.8,1.09,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","GATATCAAGTATATTG",12,41,6.43,-4.41,0.92,1.5,1.2,0.05,">1 nonsynonymous","G146I Q163L E186A T201W",4
"lib2","SARS-CoV-2","GATATCAATGAGAGTG",2,13.32,6.3,-4.53,0.43,1.5,1.05,0.01,">1 nonsynonymous","V11N G83I",2
"lib2","SARS-CoV-2","GATATCACGAAACTAT",3,66.43,10.8,-0.04,0.04,2.99,1.02,0,"1 nonsynonymous","N30D",1
"lib2","SARS-CoV-2","GATATCACTACAGTAT",13,89.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20M N107L V173F",3
"lib2","SARS-CoV-2","GATATCACTGAGGACC",3,0.06,NA,NA,NA,NA,NA,NA,"stop","E76Y T85S Y119A I142* T148A",5
"lib2","SARS-CoV-2","GATATCACTTACGAAT",1,24.81,6.8,-4.04,0.35,1.5,1.12,0.02,">1 nonsynonymous","I2F S36N Y91K Y165M A190H",5
"lib2","SARS-CoV-2","GATATCAGAATAAATA",2,50.51,9.77,-1.07,0.05,2.88,1.03,0,">1 nonsynonymous","K128I P169V",2
"lib2","SARS-CoV-2","GATATCAGCACTAGAT",5,48.81,9.21,-1.63,0.04,2.91,1.09,0,">1 nonsynonymous","D97T E154Y",2
"lib2","SARS-CoV-2","GATATCAGGCAGCTGA",1,6.41,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","L95E N107H",2
"lib2","SARS-CoV-2","GATATCATAAACTACC",1,0,NA,NA,NA,NA,NA,NA,"stop","A89N W106*",2
"lib2","SARS-CoV-2","GATATCATCTTCAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S D137V Q163T",3
"lib2","SARS-CoV-2","GATATCATTCAAAAAC",13,360.37,10.58,-0.26,0.02,2.93,1.05,0,">1 nonsynonymous","S41K T148R",2
"lib2","SARS-CoV-2","GATATCCAAATACAAT",13,95.25,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7Q N92H",2
"lib2","SARS-CoV-2","GATATCCACAATCAAT",4,0.42,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATATCCATAGCCCAT",12,53.49,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","GATATCCCACAGTATA",8,107.66,9.1,-1.73,0.11,1.7,1.1,0.01,">1 nonsynonymous","W106H G152Q",2
"lib2","SARS-CoV-2","GATATCCCGACCCAAT",8,8.09,6.36,-4.47,0.66,3,1.09,0.02,">1 nonsynonymous","A33D N58F Y121K",3
"lib2","SARS-CoV-2","GATATCCGCAAGGTCT",5,13.07,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","S113W D137G V153S",3
"lib2","SARS-CoV-2","GATATCCGGGAATGTA",1,23.58,7.91,-2.93,0.26,1.5,1.02,0.03,">1 nonsynonymous","V37L D90H N107T",3
"lib2","SARS-CoV-2","GATATCGACTCCGGCT",2,180.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36W A89L K132E T148V S184Y",5
"lib2","SARS-CoV-2","GATATCGAGTGGAAAT",4,20.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D112C L131A",2
"lib2","SARS-CoV-2","GATATCGATATGTGAA",10,76.65,10.74,-0.09,0.04,2.95,1.04,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GATATCGCCCCACCTA",20,238.94,9.71,-1.12,0.06,2.25,1.04,0,">1 nonsynonymous","G9L T100V S139I",3
"lib2","SARS-CoV-2","GATATCGTTTTCATCC",7,72.58,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N4R S19V N58M T140K T148P Q163D R179Y",7
"lib2","SARS-CoV-2","GATATCTAGGAACAAA",13,97,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T85R Y93P G116S",3
"lib2","SARS-CoV-2","GATATCTCAAACATGG",7,1.14,NA,NA,NA,NA,NA,NA,"stop","K128L G174*",2
"lib2","SARS-CoV-2","GATATCTGCCCTAATC",4,22.85,11.03,0.19,0.07,2.83,1.14,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","GATATCTTAAACGCTG",4,18.53,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","C49Y S147P C158R",3
"lib2","SARS-CoV-2","GATATCTTACGTAGTA",3,71.3,9.98,-0.85,0.03,2.96,1.05,0,"1 nonsynonymous","T170M",1
"lib2","SARS-CoV-2","GATATCTTATTGACAC",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54V D98K P177Q P197M",4
"lib2","SARS-CoV-2","GATATGAAAATCACCA",3,11.13,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","L60M V77W A89N S113L G172A",5
"lib2","SARS-CoV-2","GATATGAAGGGTGTAA",10,180.24,10.73,-0.1,0.04,2.97,1.04,0,">1 nonsynonymous","I2G K128L",2
"lib2","SARS-CoV-2","GATATGAATATAAGAT",1,31.42,10.5,-0.33,0.11,2.95,1.1,0.01,">1 nonsynonymous","G9S N40R P149T",3
"lib2","SARS-CoV-2","GATATGAATCATTTAC",4,64.87,10.86,0.02,0.07,2.94,1.07,0,">1 nonsynonymous","T55V T201M",2
"lib2","SARS-CoV-2","GATATGAATGAAAACT",4,23.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A K87L N151I",3
"lib2","SARS-CoV-2","GATATGACACAAACTA",1,37.7,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G101L Y143S C150M",3
"lib2","SARS-CoV-2","GATATGACGAAACGCA",2,31.15,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V11R N64K A145C",3
"lib2","SARS-CoV-2","GATATGACTCCACAAT",5,101.41,10.41,-0.42,0.08,2.88,1.08,0,">1 nonsynonymous","G9C V173L",2
"lib2","SARS-CoV-2","GATATGACTTCACCTA",5,37.89,6,-4.84,2,1.5,1.25,0.08,">1 nonsynonymous","N4P G51S F70S V77T T100S",5
"lib2","SARS-CoV-2","GATATGAGGTATAACC",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V V115L",2
"lib2","SARS-CoV-2","GATATGATAAAATAGC",6,79.7,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L95V R124L Q144N Y175L T201R",5
"lib2","SARS-CoV-2","GATATGATAGTTGTGT",9,107.99,10.78,-0.05,0.05,2.88,1.12,0,"1 nonsynonymous","T15S",1
"lib2","SARS-CoV-2","GATATGCAAGCACCAC",1,11.01,9.29,-1.54,0.1,2.1,1.01,0,">1 nonsynonymous","P82V P169T",2
"lib2","SARS-CoV-2","GATATGCCAAGCTGAG",10,108.96,9.86,-0.98,0.14,2.06,1.09,0.01,">1 nonsynonymous","F12V Y35D",2
"lib2","SARS-CoV-2","GATATGCCACCCTGTT",3,42.62,9.97,-0.87,0.09,2.31,1.05,0,">1 nonsynonymous","G51F T201K",2
"lib2","SARS-CoV-2","GATATGCCGAAACCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F44G F134*",2
"lib2","SARS-CoV-2","GATATGCGGACTACAG",14,198.64,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N130R V173G R179A",3
"lib2","SARS-CoV-2","GATATGCTAGCAAAAA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F W106R P161T S200G",4
"lib2","SARS-CoV-2","GATATGGACGAATTTT",3,40.18,9.35,-1.48,0.22,1.63,1.11,0.02,">1 nonsynonymous","S41T F185S",2
"lib2","SARS-CoV-2","GATATGGCAGATTCTT",2,23.51,10.03,-0.8,0.11,2.1,1,0,">1 nonsynonymous","D59H P96Q",2
"lib2","SARS-CoV-2","GATATGGCGAGATAAC",3,57.84,10.43,-0.4,0.08,2.79,1.17,0,">1 nonsynonymous","L5K F44P",2
"lib2","SARS-CoV-2","GATATGGGCAACGGGG",8,197.39,9.45,-1.39,0.06,2.92,1.07,0,">1 nonsynonymous","Y119I P197R",2
"lib2","SARS-CoV-2","GATATGGTCTTTTTGG",10,134.11,10.94,0.11,0.04,2.98,1.05,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","GATATGTCACTCACAT",3,7.35,8.57,-2.26,0.28,1.5,1,0.03,">1 nonsynonymous","T15G V103T",2
"lib2","SARS-CoV-2","GATATGTCCTTTATGC",13,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95R G155P R179G",3
"lib2","SARS-CoV-2","GATATGTGAGGACGGT",2,29.89,6.02,-4.81,0.77,3,1.27,0.02,">1 nonsynonymous","L95R F99V",2
"lib2","SARS-CoV-2","GATATGTTAAGTATAA",3,47.49,7.77,-3.07,0.09,1.5,1.04,0,">1 nonsynonymous","A33W N58E N107I",3
"lib2","SARS-CoV-2","GATATTAAAGCTGTTA",4,18.87,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L95D L111Q S147I Q168S",4
"lib2","SARS-CoV-2","GATATTAAATTGGACG",7,48.81,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","G101D R127I Y165F R179W",4
"lib2","SARS-CoV-2","GATATTAACCTCGAAG",4,20.3,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y35Q Y50A L60I I88R G101D K114R",6
"lib2","SARS-CoV-2","GATATTAAGACGAAGT",5,0.99,NA,NA,NA,NA,NA,NA,"stop","T46* Y93S Y143R S184V S200L",5
"lib2","SARS-CoV-2","GATATTAATTTGCCTA",10,44.37,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S45I V103H S139Y",3
"lib2","SARS-CoV-2","GATATTACAAGATTCC",5,0,NA,NA,NA,NA,NA,NA,"stop","L38R V77I G83*",3
"lib2","SARS-CoV-2","GATATTACCCAAATGA",3,30.3,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F17A S45L T55M G101C C102F G155H",6
"lib2","SARS-CoV-2","GATATTAGAAACCCAA",3,56.73,9.15,-1.68,0.09,2.74,1.05,0,">1 nonsynonymous","Y123W T170L",2
"lib2","SARS-CoV-2","GATATTAGAAGTCTTG",1,12.09,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T46S G83D Y121W Y159S T201W",5
"lib2","SARS-CoV-2","GATATTAGCCACTAAA",2,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P S43V K87S G101R G155V",5
"lib2","SARS-CoV-2","GATATTAGGCTTTACT",3,29.35,10.74,-0.1,0.09,2.92,1.03,0,"1 nonsynonymous","S147H",1
"lib2","SARS-CoV-2","GATATTAGTATCTTAA",3,13.23,10.19,-0.65,0.15,2.7,1.11,0.01,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","GATATTCAGATCTTAA",2,30.82,10.31,-0.53,0.16,2.51,1.01,0.01,">1 nonsynonymous","Y21L Q168H",2
"lib2","SARS-CoV-2","GATATTCATACATGGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","GATATTCATCCAACAC",8,37.17,6.21,-4.62,0.64,1.5,1.19,0.02,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","GATATTCATGCGATGG",3,99.97,10.01,-0.83,0.08,2.48,1.03,0,">1 nonsynonymous","A42T W106R",2
"lib2","SARS-CoV-2","GATATTCGGGGAGGAA",7,6.15,NA,NA,NA,NA,NA,NA,"stop","P96Q N120* Y175F",3
"lib2","SARS-CoV-2","GATATTCTTATTAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* F44T N92V L125F E154P Y175T",6
"lib2","SARS-CoV-2","GATATTGACGACAATA",2,20.32,9.16,-1.67,0.2,1.5,1,0.02,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","GATATTGAGAACCCAT",2,22.05,8.95,-1.89,0.12,2.73,1.16,0.01,">1 nonsynonymous","K114S I142S",2
"lib2","SARS-CoV-2","GATATTGATCATCCAT",5,155.05,10.51,-0.32,0.04,2.95,1.04,0,">1 nonsynonymous","G9M A18G",2
"lib2","SARS-CoV-2","GATATTGCACTCCGTT",2,23.78,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68K K87N N120T Y159Q",4
"lib2","SARS-CoV-2","GATATTGCAGAAGAAA",1,57.1,9.67,-1.17,0.07,2.94,1.08,0,"1 nonsynonymous","N171L",1
"lib2","SARS-CoV-2","GATATTGGGACTACCC",1,5.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","GATATTGTAAAATATT",2,28.66,7.28,-3.56,0.35,1.5,1.08,0.03,">1 nonsynonymous","N40F V77L S113V",3
"lib2","SARS-CoV-2","GATATTGTATCTTGAG",6,79.07,10.24,-0.6,0.05,2.85,1.08,0,">1 nonsynonymous","Y35N F134G",2
"lib2","SARS-CoV-2","GATATTGTCCCTGGCC",2,45.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6K N107H Q176I",3
"lib2","SARS-CoV-2","GATATTGTGGAATTAA",1,2.02,NA,NA,NA,NA,NA,NA,"stop","N4L E10G T55L P161*",4
"lib2","SARS-CoV-2","GATATTTAAACCATCT",3,28.4,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","D59E Y93R L122K",3
"lib2","SARS-CoV-2","GATATTTAAGGAACCG",1,37.96,8.85,-1.99,0.11,1.69,1.02,0.01,">1 nonsynonymous","S41Q F134I G155N A190D",4
"lib2","SARS-CoV-2","GATATTTACAGAACTT",8,43.07,9.96,-0.88,0.05,2.59,1.02,0,">1 nonsynonymous","Y35E L60R",2
"lib2","SARS-CoV-2","GATATTTACTCATTAT",5,350.42,10.11,-0.72,0.05,2.47,1.04,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","GATATTTCCGCTGGAT",2,33.53,10.5,-0.34,0.08,2.85,1.07,0,">1 nonsynonymous","S41C L60T",2
"lib2","SARS-CoV-2","GATATTTCTATCATGC",5,1.49,NA,NA,NA,NA,NA,NA,"stop","S113* R127V",2
"lib2","SARS-CoV-2","GATATTTTACTTACCC",5,40.25,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D34V S41T N92P",3
"lib2","SARS-CoV-2","GATATTTTCCGAACAT",2,0.51,NA,NA,NA,NA,NA,NA,"stop","D90* N107P K114R",3
"lib2","SARS-CoV-2","GATATTTTGCATCTAT",9,251.7,10.29,-0.55,0.04,2.9,1.06,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","GATATTTTTGTACGCC",8,80.23,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","W23K A67Y I80P Y143A",4
"lib2","SARS-CoV-2","GATCAAAAAAAGCATT",3,14.16,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I2S F17R N24T N64Y N151I V173F",6
"lib2","SARS-CoV-2","GATCAAAAACGAGGAG",10,117.08,10.88,0.04,0.04,2.91,1.1,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","GATCAAAAACTTACCT",4,50.89,10.48,-0.35,0.04,2.94,1.05,0,"1 nonsynonymous","V115G",1
"lib2","SARS-CoV-2","GATCAAAAAGTTAGAA",14,94.25,6,-4.84,1.46,1.5,1.1,0,">1 nonsynonymous","P7L S69K T85P W106N Y159F F167R",6
"lib2","SARS-CoV-2","GATCAAAAATTTGATA",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K V65E Q168I",3
"lib2","SARS-CoV-2","GATCAAAATTCGTATC",7,4.11,NA,NA,NA,NA,NA,NA,"stop","Q84C S164*",2
"lib2","SARS-CoV-2","GATCAAACAAAAAGCT",8,134.65,10.83,0,0.06,2.89,1.12,0,"1 nonsynonymous","Q163T",1
"lib2","SARS-CoV-2","GATCAAACCACGGGGG",8,63.79,10.13,-0.71,0.07,2.6,1.11,0,">1 nonsynonymous","S45F E141S",2
"lib2","SARS-CoV-2","GATCAAACCCACCAGG",8,115.06,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35A N64G A67P I72H G155W C158G Y165V V173F P197T",9
"lib2","SARS-CoV-2","GATCAAAGCGATAACT",2,61.49,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F17C D97G G117D T148E",4
"lib2","SARS-CoV-2","GATCAAAGCGCGACTA",2,24.88,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6P T63S S108P N157C",4
"lib2","SARS-CoV-2","GATCAAAGGATTTATA",4,1.19,NA,NA,NA,NA,NA,NA,"stop","N64* K94D N120L K128A",4
"lib2","SARS-CoV-2","GATCAAAGTAGATGAA",6,70.91,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40H L60E I88F E135P",4
"lib2","SARS-CoV-2","GATCAAATATAGTAAT",1,7.05,8.87,-1.96,0.09,2.12,1,0,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","GATCAAATCCCTACCC",3,42.68,10.93,0.09,0.07,2.94,1.09,0,">1 nonsynonymous","G9D R27V",2
"lib2","SARS-CoV-2","GATCAAATGAAAGTGG",1,12.78,7.41,-3.42,0.67,1.5,1.21,0.08,">1 nonsynonymous","T15G P54F F167L",3
"lib2","SARS-CoV-2","GATCAAATGTTGGCAC",11,7.12,NA,NA,NA,NA,NA,NA,"stop","N13I K56*",2
"lib2","SARS-CoV-2","GATCAAATTATCTGCT",1,43.23,7.18,-3.65,0.12,1.84,1.12,0,">1 nonsynonymous","A22E A42P C158S",3
"lib2","SARS-CoV-2","GATCAAATTGTAAACT",4,29.17,10.12,-0.71,0.08,2.2,1.08,0,">1 nonsynonymous","V115L Y123V Q144M",3
"lib2","SARS-CoV-2","GATCAACACAATAACC",18,210.93,8.32,-2.52,0.1,2.05,1.09,0,">1 nonsynonymous","D97Y N120K Y143A",3
"lib2","SARS-CoV-2","GATCAACATCGTATAC",7,104.91,6.01,-4.82,0.97,1.5,1.19,0.02,">1 nonsynonymous","F62N P82K",2
"lib2","SARS-CoV-2","GATCAACCAGCCTAAA",6,23.52,6,-4.84,2,1.5,1.13,0.07,">1 nonsynonymous","G9W T15V K26W P161D Q168N",5
"lib2","SARS-CoV-2","GATCAACGAAAACAAC",6,73.25,7.26,-3.58,0.14,1.57,1.12,0.01,">1 nonsynonymous","F44I P177C",2
"lib2","SARS-CoV-2","GATCAACGACGCGAGT",3,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L Y35I Y39L G86H K128E Y165K",6
"lib2","SARS-CoV-2","GATCAACGAGGGTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33S N130* T140H P149T",4
"lib2","SARS-CoV-2","GATCAACTAATCAGTC",1,14.36,10.39,-0.44,0.09,2.99,1,0,">1 nonsynonymous","G9K G116Y",2
"lib2","SARS-CoV-2","GATCAACTCGGATCGA",3,130.69,10.79,-0.05,0.05,2.96,1.06,0,"1 nonsynonymous","T148F",1
"lib2","SARS-CoV-2","GATCAACTGATCCCAA",3,44.98,10.74,-0.1,0.06,2.92,1.05,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","GATCAACTTTACTGCT",4,11.78,6.89,-3.94,0.44,1.5,1.04,0.01,">1 nonsynonymous","C49T F99R T201S",3
"lib2","SARS-CoV-2","GATCAAGACATTTGAC",11,108.45,9.29,-1.55,0.11,1.88,1.04,0,">1 nonsynonymous","D90V G152T",2
"lib2","SARS-CoV-2","GATCAAGACCCGACTG",11,100.8,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","GATCAAGACGAGTGAT",6,6.51,NA,NA,NA,NA,NA,NA,"stop","I2E T85* N120P K128I",4
"lib2","SARS-CoV-2","GATCAAGAGAAACTGA",5,2.4,NA,NA,NA,NA,NA,NA,"stop","Y35R T85* Y91G D97R T148M V153I",6
"lib2","SARS-CoV-2","GATCAAGCCGACCAAC",7,68.53,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F44Y R179W",2
"lib2","SARS-CoV-2","GATCAAGCTACAACAA",1,23.94,9.69,-1.14,0.11,2.31,1.04,0.01,">1 nonsynonymous","A33E K56I",2
"lib2","SARS-CoV-2","GATCAAGCTTAAGGGA",2,30.98,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C61Y V71G D90N I104L Q144T",5
"lib2","SARS-CoV-2","GATCAAGGTGTGATAT",2,22.67,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","V11P S43L G51V D98L P149S",5
"lib2","SARS-CoV-2","GATCAAGGTTTTACCT",2,43.08,10.81,-0.03,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCAAGTGAGAGGCG",3,45.94,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","C61R D68G K94Y P133L",4
"lib2","SARS-CoV-2","GATCAATATTGACTAC",3,33.14,10.74,-0.1,0.05,3,1.03,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","GATCAATCCAGTCTTC",3,31.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V11N V77A A81I D90T F156V",5
"lib2","SARS-CoV-2","GATCAATGAAATCATA",1,30.58,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","P7S E76R N92Q L125W Q144A",5
"lib2","SARS-CoV-2","GATCAATTCAAGAATA",3,70.48,9.43,-1.41,0.13,2.22,1.05,0.01,">1 nonsynonymous","N58A K87T K94F",3
"lib2","SARS-CoV-2","GATCAATTTGTACAGT",9,32.18,6,-4.84,2,3,1.14,0,"1 nonsynonymous","C102N",1
"lib2","SARS-CoV-2","GATCACAAACCCTATT",5,73.84,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T85C I138E N157P",3
"lib2","SARS-CoV-2","GATCACAACCATTTGT",5,140.05,10.79,-0.05,0.04,2.87,1.13,0,"1 nonsynonymous","T201C",1
"lib2","SARS-CoV-2","GATCACAATACCAGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G101* N120M E135M P177V",4
"lib2","SARS-CoV-2","GATCACACCTTCATTT",18,0.85,NA,NA,NA,NA,NA,NA,"stop","A18Y S45* N109*",3
"lib2","SARS-CoV-2","GATCACACGAACCAAT",3,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42P C49S",2
"lib2","SARS-CoV-2","GATCACAGGCGATGCG",3,75.62,10.8,-0.04,0.03,2.92,1.08,0,">1 nonsynonymous","Q144S L187Q",2
"lib2","SARS-CoV-2","GATCACATCACATTGT",4,30.25,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","S41Q P161Y",2
"lib2","SARS-CoV-2","GATCACATGTTCGTAG",2,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50H G86T",2
"lib2","SARS-CoV-2","GATCACCAACGAAGAA",1,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45F N58L Y91M A105E G146K",5
"lib2","SARS-CoV-2","GATCACCACAAGCAAC",7,127.38,10.84,0.01,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCACCAGTGAGTAA",5,62.04,10.79,-0.05,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCACCCTAAAACAG",9,118.24,10.79,-0.05,0.05,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GATCACCCTACGCTGG",2,3.27,NA,NA,NA,NA,NA,NA,"stop","S36W N130*",2
"lib2","SARS-CoV-2","GATCACCCTATAGTGA",11,74.83,6,-4.84,1.72,1.5,1.12,0,">1 nonsynonymous","G83C P96M I104Y Q144S Y178F",5
"lib2","SARS-CoV-2","GATCACCGAAACGGTT",7,54.83,10.8,-0.03,0.04,2.9,1.11,0,"1 nonsynonymous","P149G",1
"lib2","SARS-CoV-2","GATCACCGCATTGAAA",8,105.09,10.67,-0.16,0.03,2.96,1.03,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","GATCACGAAAATCAAA",4,5.39,NA,NA,NA,NA,NA,NA,"stop","I28G V37P N64A P149*",4
"lib2","SARS-CoV-2","GATCACGACCACCCGC",5,0.09,NA,NA,NA,NA,NA,NA,"stop","P7R Y21* T140N G152L",4
"lib2","SARS-CoV-2","GATCACGACTAATAGA",1,5.15,9.7,-1.13,0.24,2.32,1.16,0.02,">1 nonsynonymous","A14V S43W P54S",3
"lib2","SARS-CoV-2","GATCACGCACTGTAGT",8,143.04,10.6,-0.24,0.04,2.93,1.07,0,">1 nonsynonymous","S41R T63E",2
"lib2","SARS-CoV-2","GATCACGCCTCCATTT",6,61.15,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A14S S29M N64T Y159T",4
"lib2","SARS-CoV-2","GATCACGCGTAACTAA",2,3.84,NA,NA,NA,NA,NA,NA,"stop","I28R S43* G86C D112V N120*",5
"lib2","SARS-CoV-2","GATCACGGTTGATTAC",6,63.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43T P96I G116Q R124K G155S",5
"lib2","SARS-CoV-2","GATCACGTACCACCAT",13,56.5,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","N64K A89G I104Q",3
"lib2","SARS-CoV-2","GATCACGTTCGAATCT",6,72.3,9.21,-1.63,0.13,1.72,1.24,0.01,"1 nonsynonymous","N92G",1
"lib2","SARS-CoV-2","GATCAGAAACAAACGT",5,38.68,8.96,-1.88,0.11,2.15,1.05,0.01,">1 nonsynonymous","W106L F156N",2
"lib2","SARS-CoV-2","GATCAGACTCAATTAG",3,57.19,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N40I T55P Y119W C158R",4
"lib2","SARS-CoV-2","GATCAGACTTCACAAG",3,80.16,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S45L L60M K87L K114P T140L F156D Q168K",7
"lib2","SARS-CoV-2","GATCAGAGCAAATACA",2,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S D34S G51V K87F S139Y C150S",6
"lib2","SARS-CoV-2","GATCAGAGTCCATTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","V65K A89C D98*",3
"lib2","SARS-CoV-2","GATCAGATAGTTCATG",2,22.2,10.76,-0.08,0.05,3,1.01,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","GATCAGATCCAAATAT",6,120.13,8.2,-2.63,0.09,2.68,1.07,0,">1 nonsynonymous","L125K T140H P149A",3
"lib2","SARS-CoV-2","GATCAGATTTGCAGAC",6,63.39,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","T46K V103W Y119N D137Y G146V Y175T",6
"lib2","SARS-CoV-2","GATCAGCAACCAATTT",10,123.83,10.52,-0.32,0.04,2.98,1.03,0,"1 nonsynonymous","L125W",1
"lib2","SARS-CoV-2","GATCAGCAATTGTGTT",4,112.84,9.65,-1.19,0.06,1.94,1.11,0,">1 nonsynonymous","W106T I138T V173G",3
"lib2","SARS-CoV-2","GATCAGCCCCGATGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","A42* G83M E186F",3
"lib2","SARS-CoV-2","GATCAGCGAAACGTCC",2,33.2,8.27,-2.57,0.2,2.01,1.02,0.02,">1 nonsynonymous","N1T Y143R",2
"lib2","SARS-CoV-2","GATCAGCTAAGCCACT",6,64.05,10.46,-0.38,0.05,2.91,1.07,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","GATCAGGCAAAACGAC",2,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R I88Y Y119T F156M",4
"lib2","SARS-CoV-2","GATCAGGCCTAGACAC",6,0,NA,NA,NA,NA,NA,NA,"stop","A14S R27* T100A",3
"lib2","SARS-CoV-2","GATCAGGTGAAACAAT",10,62.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L I88V T148R",3
"lib2","SARS-CoV-2","GATCAGTAATCAGTGA",1,47.76,10.56,-0.28,0.06,2.91,1.1,0,"1 nonsynonymous","G116Y",1
"lib2","SARS-CoV-2","GATCAGTACCACTCGG",3,39,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","D34V Y39L Y50Q N109L P149R",5
"lib2","SARS-CoV-2","GATCATAAAAAAACTG",1,0.35,NA,NA,NA,NA,NA,NA,"stop","N171*",1
"lib2","SARS-CoV-2","GATCATAAAACTTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M Y91L V182K",3
"lib2","SARS-CoV-2","GATCATAAAATTAGTA",2,50.45,10.63,-0.21,0.06,2.83,1.12,0,">1 nonsynonymous","T140K P169T",2
"lib2","SARS-CoV-2","GATCATAAATAGTATC",1,138.34,9.38,-1.45,0.08,2.53,1.06,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","GATCATAAGGCTCTGA",12,192.81,10.8,-0.04,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCATAATTGCACCT",3,6.59,8.32,-2.52,0.19,2.55,1,0.02,"1 nonsynonymous","P161D",1
"lib2","SARS-CoV-2","GATCATACAATATCCT",4,33.46,10.73,-0.11,0.08,2.85,1.18,0,">1 nonsynonymous","S43T N171A",2
"lib2","SARS-CoV-2","GATCATACATGGGTGG",8,19.38,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","L95C Y121T G172Q R179L T201M",5
"lib2","SARS-CoV-2","GATCATACGAATCTAA",2,97.19,10.16,-0.67,0.04,2.84,1.12,0,">1 nonsynonymous","C61V G83N D98M P149R",4
"lib2","SARS-CoV-2","GATCATAGATAAAGAA",3,31.19,6,-4.84,2,2.18,1.12,0,">1 nonsynonymous","L95S N107M N151L K199I",4
"lib2","SARS-CoV-2","GATCATATGCTGATTC",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y L60R G86W",3
"lib2","SARS-CoV-2","GATCATCAAAAAAAGT",7,54.31,10.16,-0.67,0.03,3,1,0,"1 nonsynonymous","F126H",1
"lib2","SARS-CoV-2","GATCATCAATTTTCTG",1,6.05,6.23,-4.6,1.98,1.5,1.18,0.04,">1 nonsynonymous","Y66Q K87L K128A I138V P161E",5
"lib2","SARS-CoV-2","GATCATCACACCACCG",5,1.2,NA,NA,NA,NA,NA,NA,"stop","K56* D90L K128L C150F P161V",5
"lib2","SARS-CoV-2","GATCATCCACCCATAT",4,76.78,8.08,-2.75,0.1,1.63,1.09,0,">1 nonsynonymous","K48V R73V",2
"lib2","SARS-CoV-2","GATCATCCTAACCAAA",4,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M V77S W106P F160C",4
"lib2","SARS-CoV-2","GATCATCGAGACAAGC",15,52.57,9.79,-1.04,0.1,2.05,1.01,0,">1 nonsynonymous","A33E E141W",2
"lib2","SARS-CoV-2","GATCATCGTCCATATG",1,16.89,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","F47V F126D",2
"lib2","SARS-CoV-2","GATCATCTCAACGCAA",2,32.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L5R Y91T I104L G116K S139V C150K G155S",7
"lib2","SARS-CoV-2","GATCATGAAACATCAT",12,86.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31Y P54T N64P F70M R136V",5
"lib2","SARS-CoV-2","GATCATGATAACAAAA",1,35.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R K94V A105W P197S",4
"lib2","SARS-CoV-2","GATCATGCATTTAAAA",1,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P F70L D98L",3
"lib2","SARS-CoV-2","GATCATGCTGAACTAT",1,46.29,10.09,-0.74,0.09,2.48,1.09,0,">1 nonsynonymous","D59L Y66C S139T",3
"lib2","SARS-CoV-2","GATCATGTTCAACCAC",15,224.24,10.72,-0.12,0.03,2.91,1.1,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","GATCATGTTGCTGTAA",13,136.51,10.92,0.09,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GATCATTAAAAGGAAT",1,11.27,10.56,-0.27,0.06,2.99,1.02,0,">1 nonsynonymous","C31G T100I Q168H",3
"lib2","SARS-CoV-2","GATCATTCACTCGTTT",6,122.02,9.73,-1.11,0.04,2.76,1.08,0,">1 nonsynonymous","N107C G174R",2
"lib2","SARS-CoV-2","GATCATTCGAAAAATA",3,45.22,9.03,-1.8,0.1,1.92,1.07,0,">1 nonsynonymous","F12S V173A",2
"lib2","SARS-CoV-2","GATCATTGAATGTTTA",1,38.22,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","G101E",1
"lib2","SARS-CoV-2","GATCATTGACAGAAAG",1,5.4,7.73,-3.1,0.39,1.5,1,0.07,">1 nonsynonymous","N4Y F12A T55V R73Q G83H N118C",6
"lib2","SARS-CoV-2","GATCATTGTAAAGTTT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","W23E D59* E135Q",3
"lib2","SARS-CoV-2","GATCATTTATAGCAAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","R27N V32I I80* P133F G146T F156P",6
"lib2","SARS-CoV-2","GATCATTTTCCACGTA",6,0.16,NA,NA,NA,NA,NA,NA,"stop","G51I N92* L122Q I138E G152S",5
"lib2","SARS-CoV-2","GATCCAAAATGTTCAT",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35* C102N N107G I142* Q163S A190S",6
"lib2","SARS-CoV-2","GATCCAAAGATTGTAC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S T55G P82A I88K Y119I N157A S184Y",7
"lib2","SARS-CoV-2","GATCCAAAGGACGCGA",3,44.57,6.51,-4.32,0.39,1.5,1.18,0.02,">1 nonsynonymous","I2V E10H G51Q D59P S113V",5
"lib2","SARS-CoV-2","GATCCAAATATTACCT",2,3.08,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATCCAAATTACTAAT",14,176.31,10.72,-0.12,0.03,2.9,1.12,0,"1 nonsynonymous","C195R",1
"lib2","SARS-CoV-2","GATCCAACCAGTCCGT",1,14.39,10.61,-0.23,0.1,3,1,0,">1 nonsynonymous","S41Y C61A P96S C195Y",4
"lib2","SARS-CoV-2","GATCCAACCGAAATTC",14,258.74,10.63,-0.2,0.03,2.95,1.05,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","GATCCAAGCGCACGGG",1,8.26,10.65,-0.18,0.11,2.79,1.21,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","GATCCAATAAGACGGC",3,66.76,10.64,-0.2,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCCAATCCCTAATA",4,47.24,10.82,-0.02,0.06,2.98,1.05,0,"1 nonsynonymous","G9K",1
"lib2","SARS-CoV-2","GATCCAATGAGACTAG",5,35.72,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","P96R P133S Q144E",3
"lib2","SARS-CoV-2","GATCCACAAGAACCCA",7,31.43,10.03,-0.81,0.07,2.74,1.08,0,">1 nonsynonymous","V115S P161A K198R",3
"lib2","SARS-CoV-2","GATCCACGAAGTTTCT",4,36.48,10.15,-0.69,0.06,2.79,1.02,0,">1 nonsynonymous","G51Q V115Y T140L",3
"lib2","SARS-CoV-2","GATCCAGACGTTCGGT",10,179.46,10.81,-0.03,0.04,2.94,1.06,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","GATCCAGCAAGGAGAG",1,32.7,6.08,-4.75,0.97,1.5,1.16,0.02,">1 nonsynonymous","R27E Y119L P133R T148Y",4
"lib2","SARS-CoV-2","GATCCAGCACCAACTT",1,23.82,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6T Y35I Q79R I88E N120Q P191V",6
"lib2","SARS-CoV-2","GATCCAGTATAAAAAA",13,221.38,9.06,-1.78,0.06,2.91,1.1,0,">1 nonsynonymous","I2T G166L",2
"lib2","SARS-CoV-2","GATCCAGTCTAGGAAC",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V V52T F99H D137V G155D P169C",6
"lib2","SARS-CoV-2","GATCCAGTGTTAATAT",1,8.37,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C102S S113Y E154I F160K",4
"lib2","SARS-CoV-2","GATCCATTACGAGTAA",4,121.96,10.84,0,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCCATTCGGCATTA",6,51.32,10.86,0.03,0.05,2.83,1.16,0,"1 nonsynonymous","P54K",1
"lib2","SARS-CoV-2","GATCCATTCTGAATTA",2,25.08,9.47,-1.37,0.18,1.85,1.13,0.02,">1 nonsynonymous","T55S A89R Y143F",3
"lib2","SARS-CoV-2","GATCCATTTCAAACTT",3,103.53,9.94,-0.9,0.05,2.15,1.05,0,">1 nonsynonymous","G83W D90T A190S",3
"lib2","SARS-CoV-2","GATCCCAAAACTAACT",1,18.94,8.1,-2.73,0.22,1.89,1.2,0.02,">1 nonsynonymous","W23L S184A",2
"lib2","SARS-CoV-2","GATCCCAAAGCAAAGT",7,50.45,10.47,-0.36,0.07,2.9,1.04,0,">1 nonsynonymous","I2S L183F",2
"lib2","SARS-CoV-2","GATCCCACACTGAAAC",2,16.15,10.78,-0.06,0.09,2.71,1.32,0,"synonymous","",0
"lib2","SARS-CoV-2","GATCCCAGATGAGGAA",8,16.58,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","A22E P96N C102Y Y119L K132W",5
"lib2","SARS-CoV-2","GATCCCAGCCTTTAGA",4,44.73,10.69,-0.15,0.07,2.89,1.15,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GATCCCATAAGCTATT",5,133.98,6.26,-4.57,0.28,1.5,1.15,0,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","GATCCCCGTTAGGAAG",4,80.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K87E N92S G117Y P169A",4
"lib2","SARS-CoV-2","GATCCCGAGAGTCCCC",7,131.37,10.72,-0.12,0.05,2.86,1.12,0,">1 nonsynonymous","A42Y K56E",2
"lib2","SARS-CoV-2","GATCCCTACATTTATT",2,15.14,9.29,-1.55,0.13,1.85,1.05,0.01,">1 nonsynonymous","G83Y A89Y",2
"lib2","SARS-CoV-2","GATCCCTAGCTATGCT",3,102.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G101W N120K",2
"lib2","SARS-CoV-2","GATCCCTCGCACGTAC",9,131.8,10.8,-0.04,0.03,2.93,1.08,0,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","GATCCCTGGCCACTGA",8,48.66,9.08,-1.76,0.26,1.5,1.01,0.03,">1 nonsynonymous","A33L P96V T140R",3
"lib2","SARS-CoV-2","GATCCCTTATGCCCCG",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R V103P P133T L183G",4
"lib2","SARS-CoV-2","GATCCGCCTTCTAGAA",10,123.58,6.36,-4.48,0.46,1.5,1.18,0.02,">1 nonsynonymous","F8M S45V G116S Q168I",4
"lib2","SARS-CoV-2","GATCCGGAAAAACAGT",4,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134D Y178P",2
"lib2","SARS-CoV-2","GATCCGGGAACGTGAT",4,1.16,NA,NA,NA,NA,NA,NA,"stop","S53* S200V",2
"lib2","SARS-CoV-2","GATCCGGTTACCTCAT",2,31.82,9.14,-1.69,0.07,2.99,1,0,">1 nonsynonymous","V37Q K128F G166T",3
"lib2","SARS-CoV-2","GATCCGTACAGATAAG",3,14.68,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","D75T Y91S F99I C158L",4
"lib2","SARS-CoV-2","GATCCGTACCGTGACC",2,117.61,9.85,-0.99,0.03,2.93,1.05,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","GATCCGTAGTTCATTT",1,9.53,6.67,-4.16,0.36,2.25,1.12,0.01,">1 nonsynonymous","N64F V77R Y119M",3
"lib2","SARS-CoV-2","GATCCGTTGGTGATAA",11,45.94,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","G101L D112F",2
"lib2","SARS-CoV-2","GATCCGTTTAACCGGG",10,122.87,10.64,-0.2,0.04,2.88,1.07,0,">1 nonsynonymous","V115R Y123M",2
"lib2","SARS-CoV-2","GATCCTAAAATGATCA",12,303.8,10.8,-0.04,0.04,2.96,1.06,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","GATCCTACGCAGTATT",1,23.39,10.87,0.03,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCCTAGAAATATAC",2,9.42,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","N1L V103F",2
"lib2","SARS-CoV-2","GATCCTATATATAAAG",2,41.42,10.67,-0.17,0.06,2.91,1.07,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","GATCCTCCATAGAAAT",9,131.49,10.94,0.1,0.05,2.94,1.08,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","GATCCTCGCCCGCGAA",1,15.34,10.32,-0.51,0.08,2.52,1.02,0.01,"1 nonsynonymous","V52N",1
"lib2","SARS-CoV-2","GATCCTCGGGCAACTC",2,34.29,10.81,-0.03,0.06,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCCTCGTACGTAGA",5,89.83,9.38,-1.46,0.05,2.9,1.09,0,"1 nonsynonymous","A145F",1
"lib2","SARS-CoV-2","GATCCTCTGTACGAAG",7,90.48,11.13,0.3,0.05,2.96,1.05,0,">1 nonsynonymous","A42R L122K",2
"lib2","SARS-CoV-2","GATCCTGCCAAGAAAG",5,211.97,8.33,-2.5,0.13,2.54,1.05,0.01,">1 nonsynonymous","S41G T55H Y175M A190H",4
"lib2","SARS-CoV-2","GATCCTGTCTGATTTC",6,61.65,8.79,-2.05,0.36,1.5,1,0.05,">1 nonsynonymous","Q84P F134L",2
"lib2","SARS-CoV-2","GATCCTTAAACGAACA",6,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V T85M",2
"lib2","SARS-CoV-2","GATCCTTATCCCGACG",1,14.12,8.28,-2.56,0.17,2.16,1.19,0.01,">1 nonsynonymous","N58Y Y119I I138A",3
"lib2","SARS-CoV-2","GATCCTTCCATATTTC",4,82.4,9.2,-1.64,0.11,1.5,1.09,0.01,">1 nonsynonymous","S53F F62S D90S N110K N130S Q144R K198Q",7
"lib2","SARS-CoV-2","GATCCTTCTGAGGCAC",4,74.3,10.48,-0.36,0.03,2.91,1.06,0,"1 nonsynonymous","F44A",1
"lib2","SARS-CoV-2","GATCCTTGCTCGAGCC",13,132.38,10.82,-0.02,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCCTTGTAAATACT",2,52.73,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C6Y N40L Y91D S129L Q163Y",5
"lib2","SARS-CoV-2","GATCGAAAATGAGGAT",6,0.72,NA,NA,NA,NA,NA,NA,"stop","I2D Y39D C61N V71* A89I S139*",6
"lib2","SARS-CoV-2","GATCGAAAATGGATTC",1,19.6,9.7,-1.14,0.16,2.03,1.09,0.01,">1 nonsynonymous","T15D Y21F Y66A",3
"lib2","SARS-CoV-2","GATCGAACTAAAAATA",11,93.12,10.86,0.03,0.07,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCGAAGGCCCTCGA",7,29.17,8.93,-1.9,0.21,1.5,1.06,0.02,">1 nonsynonymous","T3A F17G S53L A190L",4
"lib2","SARS-CoV-2","GATCGAATCTTCTTGA",11,57.57,6,-4.84,1.56,1.5,1.11,0.01,">1 nonsynonymous","A105T S113L C150R G174P",4
"lib2","SARS-CoV-2","GATCGACAAAAATGTC",7,95.01,10.82,-0.02,0.04,2.93,1.08,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","GATCGACAACCGTTCA",5,56.53,10.52,-0.31,0.06,2.96,1,0,"1 nonsynonymous","T46A",1
"lib2","SARS-CoV-2","GATCGACAGACACACA",1,21.66,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P96K R136P",2
"lib2","SARS-CoV-2","GATCGACCCACTAAGA",5,109.59,9.81,-1.03,0.09,2.52,1.02,0,">1 nonsynonymous","V11L G83T K199L",3
"lib2","SARS-CoV-2","GATCGACGTACCGGAG",1,17.47,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","N107R F134P",2
"lib2","SARS-CoV-2","GATCGACTACCACCGG",2,14.35,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N64W D75P W106Q G166L",4
"lib2","SARS-CoV-2","GATCGAGACAGTTTAT",9,58.66,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","T63C F70S V103Y N120P E141G N171Q",6
"lib2","SARS-CoV-2","GATCGAGCCCGACGAT",2,72.04,10.56,-0.27,0.07,2.88,1.08,0,">1 nonsynonymous","N4S N13G",2
"lib2","SARS-CoV-2","GATCGATTGGACCCAG",8,341.53,9.82,-1.02,0.06,2.25,1.04,0,">1 nonsynonymous","N4R F12L T85L T148Q",4
"lib2","SARS-CoV-2","GATCGCACAACCCAAA",1,11.08,6,-4.84,2,3,1.22,0.02,">1 nonsynonymous","N58T N109I E141C C150V",4
"lib2","SARS-CoV-2","GATCGCACTCATTACA",2,10.28,9.54,-1.3,0.15,2.04,1.08,0.01,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","GATCGCAGGTACGATA",6,13.32,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","L60R I80L N107F",3
"lib2","SARS-CoV-2","GATCGCCCAAATAGAG",13,304.06,10.32,-0.52,0.04,2.95,1.08,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","GATCGCCGTAACGCCG",7,48.88,10.76,-0.08,0.05,2.97,1.06,0,">1 nonsynonymous","S36R N151K",2
"lib2","SARS-CoV-2","GATCGCGCGTAAATAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATCGCTAAGGCAAAG",3,0.79,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATCGCTACCATCAAA",7,71.52,8.25,-2.59,0.24,1.5,1.14,0.03,">1 nonsynonymous","V77M N107V",2
"lib2","SARS-CoV-2","GATCGCTACTTAGAGT",3,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89S N130W L188R",3
"lib2","SARS-CoV-2","GATCGCTCTCGAATGT",4,49.26,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4A T15S N40P P82S A89H",5
"lib2","SARS-CoV-2","GATCGCTGTGCGAAGA",2,54.62,10.17,-0.67,0.08,2.89,1.07,0,">1 nonsynonymous","N40S Y178V",2
"lib2","SARS-CoV-2","GATCGCTTGCTCACTA",1,20.28,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","G86F P96I",2
"lib2","SARS-CoV-2","GATCGGAAATCAATAA",5,73.45,8.13,-2.71,0.19,1.69,1.08,0.01,">1 nonsynonymous","F44A Y119L F160L",3
"lib2","SARS-CoV-2","GATCGGAATTATACCT",2,70.24,8.37,-2.47,0.14,2.5,1.07,0.01,">1 nonsynonymous","Y39T K48Y Q168L",3
"lib2","SARS-CoV-2","GATCGGACAACATACT",3,13.3,11.01,0.18,0.15,2.67,1.34,0,"1 nonsynonymous","P197M",1
"lib2","SARS-CoV-2","GATCGGATACGTCCAA",5,57.95,6,-4.84,1.43,3,1.17,0,">1 nonsynonymous","D97L G146V T170R",3
"lib2","SARS-CoV-2","GATCGGATTACATCTT",3,20.3,6.52,-4.32,0.61,1.5,1.15,0.05,">1 nonsynonymous","G83C E135S N157I",3
"lib2","SARS-CoV-2","GATCGGCCGGGCCAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","N92*",1
"lib2","SARS-CoV-2","GATCGGCGCTTCCCAA",5,64.03,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107C D112P P149N P161R G172K",5
"lib2","SARS-CoV-2","GATCGGGAAATTCGAT",10,34.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41M T100G N107Y P191D",4
"lib2","SARS-CoV-2","GATCGGGATCCGAGAA",3,33.03,10.87,0.03,0.05,2.79,1.23,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","GATCGGTAGATGCTGC",4,27.34,10.91,0.07,0.07,2.94,1.06,0,">1 nonsynonymous","G9E T201A",2
"lib2","SARS-CoV-2","GATCGGTATAATTTTA",15,201.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18W S43L L57D G86I P161F",5
"lib2","SARS-CoV-2","GATCGTATAAAAACCC",2,21.11,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9V C61L L162W",3
"lib2","SARS-CoV-2","GATCGTATCAACTCTT",2,23.37,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35S N120H F167S",3
"lib2","SARS-CoV-2","GATCGTCTAGTAAAAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I C61A G74R",3
"lib2","SARS-CoV-2","GATCGTGTAACTTACC",1,26.99,9.54,-1.29,0.27,1.7,1.23,0.03,">1 nonsynonymous","V173T K199P",2
"lib2","SARS-CoV-2","GATCGTGTTCTCAATC",12,152.03,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G9R Y119L P161T",3
"lib2","SARS-CoV-2","GATCGTTGATGAATAA",8,49.7,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","I88S P96M Y119E",3
"lib2","SARS-CoV-2","GATCGTTGTAAAAAAC",1,19.62,10.23,-0.6,0.07,2.93,1.06,0,">1 nonsynonymous","C6G F160R A190S",3
"lib2","SARS-CoV-2","GATCTAAAATCTCCTG",7,150.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3G I28K K87D N107I",4
"lib2","SARS-CoV-2","GATCTAAACCAGGTAT",3,98.63,10.29,-0.55,0.05,2.92,1.07,0,">1 nonsynonymous","L60M G152V",2
"lib2","SARS-CoV-2","GATCTAAAGTATAGTC",5,0.39,NA,NA,NA,NA,NA,NA,"stop","G86M Y121*",2
"lib2","SARS-CoV-2","GATCTAAATTACCTAA",4,37.99,9.75,-1.09,0.08,2.01,1.01,0,">1 nonsynonymous","G83V D97C Y123F",3
"lib2","SARS-CoV-2","GATCTAAGATCCCTTT",10,110.67,10.77,-0.07,0.03,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCTAAGGGCGGTGT",1,13.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G86K F167N",2
"lib2","SARS-CoV-2","GATCTAATCATGGGGA",16,239.53,10.76,-0.08,0.03,2.99,1.03,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","GATCTACAGTAAGAGT",3,6.76,7.14,-3.7,1.38,1.5,1.18,0.05,">1 nonsynonymous","F44L C61V E76N G86V D90M L131S G146R",7
"lib2","SARS-CoV-2","GATCTACCAGCTAAGC",8,82.51,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S29Q A105Y R179S",3
"lib2","SARS-CoV-2","GATCTACGAGTCTGTT",9,40.91,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S19W K87S D98M N107G",4
"lib2","SARS-CoV-2","GATCTACGATCCTACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G D90Y D112A",3
"lib2","SARS-CoV-2","GATCTACGGCTCCGAA",5,1.58,NA,NA,NA,NA,NA,NA,"stop","P7T F134*",2
"lib2","SARS-CoV-2","GATCTAGACGCGGAAC",19,186.6,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C31P L57P Y119R G146K C158S",5
"lib2","SARS-CoV-2","GATCTAGAGATATGAT",3,34.57,10.87,0.04,0.07,2.85,1.17,0,"1 nonsynonymous","I72V",1
"lib2","SARS-CoV-2","GATCTATAACAATTCT",5,156.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N130M P177M",2
"lib2","SARS-CoV-2","GATCTATACAACTCAG",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M S43V C61D D98C A105L G174L A190L T201M",8
"lib2","SARS-CoV-2","GATCTATCATCTTTCG",3,35.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S S43C E76R F99S W106H",5
"lib2","SARS-CoV-2","GATCTATCCAATCCTA",5,81.95,10.69,-0.15,0.03,2.93,1.09,0,"1 nonsynonymous","A145S",1
"lib2","SARS-CoV-2","GATCTATGCAATAGAA",3,25.58,9.98,-0.85,0.14,2.43,1,0.01,">1 nonsynonymous","I28K K128S N171W",3
"lib2","SARS-CoV-2","GATCTCACATAAGACA",3,74.64,8.81,-2.03,0.08,2.94,1.06,0,">1 nonsynonymous","T63G G146K",2
"lib2","SARS-CoV-2","GATCTCATATAATACA",1,16.63,10.74,-0.1,0.07,2.88,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GATCTCATATTTGCGT",4,50.54,9.93,-0.9,0.05,2.9,1,0,">1 nonsynonymous","I2L Y121S",2
"lib2","SARS-CoV-2","GATCTCCAAATGCCCT",6,97.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9R A14G L122P D137F P177R",5
"lib2","SARS-CoV-2","GATCTCCACATGGACA",1,6.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R T15L F47T Y119L",4
"lib2","SARS-CoV-2","GATCTCCTGCAGCTTA",8,58.48,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","S45L C158F P177L",3
"lib2","SARS-CoV-2","GATCTCGAGTCCAGAA",8,18.75,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G152C V181Q T201A",3
"lib2","SARS-CoV-2","GATCTCGATACTTGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib2","SARS-CoV-2","GATCTCGATTACTAAA",2,45.71,10.55,-0.28,0.07,2.85,1.1,0,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","GATCTCGCAAAGTAAA",16,195.18,8.08,-2.76,0.09,2.07,1.05,0,">1 nonsynonymous","K87D D97I Y119L F160N",4
"lib2","SARS-CoV-2","GATCTCGCCGTCCAAG",10,82.07,8.45,-2.39,0.12,1.5,1.03,0.01,">1 nonsynonymous","V65K A105T G174S",3
"lib2","SARS-CoV-2","GATCTCGGATTTCTAC",1,8.92,8.22,-2.62,0.32,1.5,1,0.04,">1 nonsynonymous","G51L P161G P197Q",3
"lib2","SARS-CoV-2","GATCTCGTCTCGGGGC",9,48.3,7.06,-3.78,0.38,1.5,1.13,0.03,">1 nonsynonymous","Y119R D137F",2
"lib2","SARS-CoV-2","GATCTCGTTTGACAGT",6,1.37,NA,NA,NA,NA,NA,NA,"stop","T3P E10* S41N P96R",4
"lib2","SARS-CoV-2","GATCTCTAACAGGAAG",8,39.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G R25W T201R",3
"lib2","SARS-CoV-2","GATCTCTAGTCACGGT",3,148.84,10.66,-0.18,0.06,2.86,1.07,0,">1 nonsynonymous","A33M N110R K128N",3
"lib2","SARS-CoV-2","GATCTCTCCACTACAA",3,50.49,8.5,-2.34,0.14,3,1.02,0.01,">1 nonsynonymous","N40S Y175Q",2
"lib2","SARS-CoV-2","GATCTCTCGTACGCCA",6,0.82,NA,NA,NA,NA,NA,NA,"stop","N4* R25K N92Y N107R",4
"lib2","SARS-CoV-2","GATCTCTGAAGTAGTC",3,47.2,9.76,-1.08,0.09,2.55,1,0,">1 nonsynonymous","Y35H F126L",2
"lib2","SARS-CoV-2","GATCTCTGCTACATAC",1,0.03,NA,NA,NA,NA,NA,NA,"stop","C6R N13*",2
"lib2","SARS-CoV-2","GATCTCTGGTTAATTT",4,24.71,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5R S36N I88Q Q144S G174A",5
"lib2","SARS-CoV-2","GATCTGAAAGCGTAAT",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95T S113I C150H",3
"lib2","SARS-CoV-2","GATCTGAAGCCCCTTA",11,128.78,9.63,-1.21,0.05,2.86,1.01,0,">1 nonsynonymous","K128L N151L Q168T",3
"lib2","SARS-CoV-2","GATCTGACAATGCTAA",5,98.1,10.58,-0.26,0.04,2.94,1.04,0,">1 nonsynonymous","Y39K L122D",2
"lib2","SARS-CoV-2","GATCTGACACTGAGAA",8,3.74,NA,NA,NA,NA,NA,NA,"stop","L38M D59* I104* R127E",4
"lib2","SARS-CoV-2","GATCTGAGGGTGCAAT",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N G146R H189T",3
"lib2","SARS-CoV-2","GATCTGATTATATAAC",3,26.03,10.9,0.07,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCTGATTCCAATAA",8,197.66,10.84,0.01,0.03,2.91,1.08,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","GATCTGCAACTATAGA",5,57.55,6.03,-4.8,1.07,1.5,1.16,0.02,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","GATCTGCCAACACGCA",1,31.46,10.75,-0.09,0.04,3,1.02,0,">1 nonsynonymous","T55L D90S",2
"lib2","SARS-CoV-2","GATCTGCCACACAGCT",13,141.69,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","I88R F134A G166A",3
"lib2","SARS-CoV-2","GATCTGCGCCTAGACC",5,32.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F44L Q84F D98I G166W",4
"lib2","SARS-CoV-2","GATCTGGAGTACATAC",6,51.01,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C158F L183C",2
"lib2","SARS-CoV-2","GATCTGGGAAGACATA",2,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S Y165S",2
"lib2","SARS-CoV-2","GATCTGGTGATAAATA",5,115.96,10.38,-0.45,0.11,2.59,1.01,0.01,"1 nonsynonymous","E135K",1
"lib2","SARS-CoV-2","GATCTGTCCGTTGCTA",1,38.68,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V37S V52N Y121R E141P",4
"lib2","SARS-CoV-2","GATCTTAATAATAGAC",10,28.62,9.08,-1.76,0.19,1.64,1.14,0.02,">1 nonsynonymous","A42R T46C C61A W106R E141D V153R",6
"lib2","SARS-CoV-2","GATCTTACCCCCAGTA",10,108.27,6,-4.84,2,3,1.22,0,">1 nonsynonymous","L38H R78D L95T F99S I104L",5
"lib2","SARS-CoV-2","GATCTTAGTCACGGGT",3,83.62,9.55,-1.29,0.09,2.07,1.06,0,">1 nonsynonymous","L5W F12I N107R",3
"lib2","SARS-CoV-2","GATCTTCTCATAACCG",2,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T V65D Q176R K199N",4
"lib2","SARS-CoV-2","GATCTTGAAGATGATT",7,19.44,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D34S A89Y L122W E141N",4
"lib2","SARS-CoV-2","GATCTTGACGGTACGC",2,15.63,6.32,-4.51,0.62,1.5,1.1,0.02,">1 nonsynonymous","D98H V181W C195N",3
"lib2","SARS-CoV-2","GATCTTGATGAGAGGT",5,130.01,10.43,-0.41,0.05,2.87,1.08,0,">1 nonsynonymous","N120L S129V T148Y",3
"lib2","SARS-CoV-2","GATCTTGATTAACAAA",2,16.68,10.28,-0.55,0.11,2.59,1.15,0.01,"1 nonsynonymous","G51M",1
"lib2","SARS-CoV-2","GATCTTGGTGGAAAAA",1,6.18,6,-4.84,2,1.5,1,0,">1 nonsynonymous","N4M S139I G152L Q176H",4
"lib2","SARS-CoV-2","GATCTTTACACACATT",2,0,NA,NA,NA,NA,NA,NA,"stop","A42* F99G Y121A Y143K",4
"lib2","SARS-CoV-2","GATCTTTCACGATTTA",1,25.51,10.92,0.09,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GATCTTTCGACTCTAT",1,33.78,10.72,-0.12,0.04,2.95,1.06,0,">1 nonsynonymous","P7Q S200I",2
"lib2","SARS-CoV-2","GATGAAAAAAAGTCAC",4,40.18,6.07,-4.77,1.34,1.5,1.16,0.04,">1 nonsynonymous","K48F E135F G155V",3
"lib2","SARS-CoV-2","GATGAAAAAGTGCATT",16,844.72,10.84,0.01,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGAAAAGAGGCACG",6,0.06,NA,NA,NA,NA,NA,NA,"stop","S19R Y35* L60P",3
"lib2","SARS-CoV-2","GATGAAAAGGCCTCAG",1,77.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S41L Y50F K56R G172K Y175L",5
"lib2","SARS-CoV-2","GATGAAAATACTTTCA",4,30.05,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","E10M F44P D98K N107V N120D G146L S164E",7
"lib2","SARS-CoV-2","GATGAAACGAATTTAT",4,18.5,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","D59V D90Y F99S N109D Y119G G152L Q163M",7
"lib2","SARS-CoV-2","GATGAAACGACACTAT",5,45.65,6,-4.84,0.61,1.5,1.13,0,">1 nonsynonymous","V65E D98R Y119T F126L T148A F160C",6
"lib2","SARS-CoV-2","GATGAAACTCTCCCCG",5,47.35,10.95,0.11,0.06,2.93,1.08,0,"1 nonsynonymous","S43Q",1
"lib2","SARS-CoV-2","GATGAAACTTCTAGTG",5,192.72,10.7,-0.14,0.03,3,1.03,0,">1 nonsynonymous","K128H G152S",2
"lib2","SARS-CoV-2","GATGAAAGATATGCCA",3,9.72,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","P82K P177S T201L",3
"lib2","SARS-CoV-2","GATGAAAGGGTTCCAA",5,69.44,8.21,-2.63,0.13,2.84,1.12,0.01,">1 nonsynonymous","G117C F156S",2
"lib2","SARS-CoV-2","GATGAAAGGTAGATGA",11,143.39,9.8,-1.04,0.08,2.29,1.02,0,">1 nonsynonymous","V37T D90L S139C",3
"lib2","SARS-CoV-2","GATGAAATCGGCTCTT",5,29.17,10.72,-0.12,0.08,2.85,1.17,0,"1 nonsynonymous","P197W",1
"lib2","SARS-CoV-2","GATGAAATGAGGCATA",8,189.07,10.23,-0.6,0.04,2.86,1.02,0,">1 nonsynonymous","S43N S45L S129A",3
"lib2","SARS-CoV-2","GATGAAATGTAATTGA",15,178.28,10.75,-0.09,0.02,3,1.02,0,"1 nonsynonymous","K132Y",1
"lib2","SARS-CoV-2","GATGAACACGCGGTCG",3,180.82,10.02,-0.82,0.08,2.35,1.03,0,">1 nonsynonymous","S45P V65F",2
"lib2","SARS-CoV-2","GATGAACATGCCCCAT",4,68.86,10.26,-0.57,0.05,2.83,1.12,0,">1 nonsynonymous","A42C N120I",2
"lib2","SARS-CoV-2","GATGAACCAGCATACG",11,5.09,NA,NA,NA,NA,NA,NA,"stop","C6N R27* V37L Y121S R127L I138E G146C",7
"lib2","SARS-CoV-2","GATGAACGCCGATCAA",14,178.97,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","F12L G116L G166I Q176K",4
"lib2","SARS-CoV-2","GATGAACTAGACACTA",8,84.29,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Q84F N107F P149T",3
"lib2","SARS-CoV-2","GATGAAGAAAAATGAC",1,27.07,10.7,-0.13,0.05,3,1.02,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","GATGAAGATAATGCCA",4,28.57,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R27F Y35T N40F F99Q F134I F167Y",6
"lib2","SARS-CoV-2","GATGAAGCGAACCGTC",7,19.93,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","S36Q K48G D98Y R124S F185R",5
"lib2","SARS-CoV-2","GATGAAGCGCAAGATT",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91S D137T",2
"lib2","SARS-CoV-2","GATGAAGCGGACGCCA",5,70.57,9.83,-1.01,0.05,2.56,1.07,0,">1 nonsynonymous","I2Y L57K N130S",3
"lib2","SARS-CoV-2","GATGAAGCTGCCCAAG",28,257.91,10.6,-0.24,0.02,2.93,1.08,0,"1 nonsynonymous","I138G",1
"lib2","SARS-CoV-2","GATGAAGGAATATCAG",6,67.42,10.8,-0.04,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGAAGGAATCAACT",3,0,NA,NA,NA,NA,NA,NA,"stop","F99S Y159* Q176L",3
"lib2","SARS-CoV-2","GATGAAGGACCCCAGA",6,95.73,10.36,-0.48,0.05,2.91,1.03,0,">1 nonsynonymous","K132T A145M",2
"lib2","SARS-CoV-2","GATGAAGGATAATAAA",5,36.45,10.94,0.1,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGAATAACCAAGTC",9,43.01,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S45R T85S D98F Y119N F167R",5
"lib2","SARS-CoV-2","GATGAATAACTTACCT",18,243.33,10.25,-0.59,0.03,2.86,1.05,0,">1 nonsynonymous","I2F D98N E135Y",3
"lib2","SARS-CoV-2","GATGAATACGCTAATG",6,0.98,NA,NA,NA,NA,NA,NA,"stop","N13Y N24* A33E D68R V153L",5
"lib2","SARS-CoV-2","GATGAATACTGGCGTA",6,83.65,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C31S F126W C150N",3
"lib2","SARS-CoV-2","GATGAATAGAAACGAC",2,17.93,10.05,-0.79,0.08,2.64,1,0,">1 nonsynonymous","F99L N130S",2
"lib2","SARS-CoV-2","GATGAATAGTAACATT",3,68.58,9.62,-1.22,0.08,2.16,1.05,0,"1 nonsynonymous","A89Q",1
"lib2","SARS-CoV-2","GATGAATATCTAAATA",4,35.11,9.46,-1.37,0.1,2.44,1.1,0,">1 nonsynonymous","L111G G155N",2
"lib2","SARS-CoV-2","GATGAATCAGTTAGAG",2,59.89,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A89M G152F L162F Q168G",4
"lib2","SARS-CoV-2","GATGAATCCAGGATAT",3,38.34,10.11,-0.72,0.05,2.81,1.06,0,">1 nonsynonymous","N30W N120L",2
"lib2","SARS-CoV-2","GATGAATCCGAACTTT",2,6.93,6.3,-4.54,2,3,1.07,0,">1 nonsynonymous","L131Q G152I",2
"lib2","SARS-CoV-2","GATGAATCTATTGCTT",9,151.51,8.92,-1.92,0.06,2.62,1.09,0,">1 nonsynonymous","F8L L60R N118D Q144R",4
"lib2","SARS-CoV-2","GATGAATTTACGTAAA",1,19.2,9.7,-1.14,0.12,2.74,1.09,0,">1 nonsynonymous","Y91R F156I",2
"lib2","SARS-CoV-2","GATGAATTTATTAGAA",1,13.53,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","K128P Y143T L162Y Q176K",4
"lib2","SARS-CoV-2","GATGACAAAATGTAAT",7,111.35,10.5,-0.34,0.05,2.93,1.09,0,">1 nonsynonymous","N1S L60I K87T",3
"lib2","SARS-CoV-2","GATGACAAAATTTTAG",18,133.72,8.06,-2.78,0.13,1.75,1.11,0.01,">1 nonsynonymous","V32A N107L",2
"lib2","SARS-CoV-2","GATGACAAATTCAAGT",3,20.5,10.09,-0.74,0.25,2.65,1,0.05,">1 nonsynonymous","V37L R136N S200Y",3
"lib2","SARS-CoV-2","GATGACAACAGCCACG",4,88.03,9.96,-0.87,0.08,2.31,1.03,0,">1 nonsynonymous","N13D G152F",2
"lib2","SARS-CoV-2","GATGACAACTATTACA",3,1.44,NA,NA,NA,NA,NA,NA,"stop","A18* D68H K128* G174H",4
"lib2","SARS-CoV-2","GATGACAGAGATCAGG",8,112.1,9.66,-1.18,0.04,2.93,1.08,0,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","GATGACAGTTAAACAC",6,75.77,9.25,-1.59,0.05,2.03,1.02,0,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","GATGACCAAGTACCAA",10,105.32,8.77,-2.07,0.27,1.5,1.02,0.03,"1 nonsynonymous","C102Y",1
"lib2","SARS-CoV-2","GATGACCACATAATTC",2,66.19,10.86,0.02,0.07,2.91,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","GATGACCGAGCCATAA",2,29.81,10.63,-0.2,0.07,2.92,1.02,0,"1 nonsynonymous","A42C",1
"lib2","SARS-CoV-2","GATGACCGATAAATAG",6,69.71,10.59,-0.25,0.05,2.83,1.05,0,">1 nonsynonymous","D97S S184Y",2
"lib2","SARS-CoV-2","GATGACCTGAATGCGC",1,32.17,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S69L A89T N157T",3
"lib2","SARS-CoV-2","GATGACCTGCCAGAAA",6,22.51,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S19K K48L D90K S113G F156T",5
"lib2","SARS-CoV-2","GATGACGAAAAATAAC",4,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I C61I",2
"lib2","SARS-CoV-2","GATGACGAGAGTGCGA",1,9.36,6,-4.84,2,3,1.02,0,">1 nonsynonymous","A18T A89D K114N G172K",4
"lib2","SARS-CoV-2","GATGACGATTGTCGTA",14,7.81,NA,NA,NA,NA,NA,NA,"stop","F99A Y119L G166* L188T K199Y",5
"lib2","SARS-CoV-2","GATGACGTACTCTGTG",10,85.67,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68L A89I V173S",3
"lib2","SARS-CoV-2","GATGACGTTAAATTAA",2,21.64,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","C102H C150R E186H",3
"lib2","SARS-CoV-2","GATGACTACTAGTTAA",11,129.76,7.61,-3.23,0.18,1.5,1.08,0.01,">1 nonsynonymous","S41A T55N D137K",3
"lib2","SARS-CoV-2","GATGAGAAACAATTGA",12,168.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T Y93L",2
"lib2","SARS-CoV-2","GATGAGAATTTCATAA",3,89.5,10.31,-0.52,0.06,2.87,1.08,0,">1 nonsynonymous","Y91M K198E",2
"lib2","SARS-CoV-2","GATGAGACAATACGCG",12,228.49,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11I R16V Y21K G172L Q176K",5
"lib2","SARS-CoV-2","GATGAGACACGGATAC",5,78.61,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107A R124N Y143N S200C",4
"lib2","SARS-CoV-2","GATGAGACGGTCCTAT",9,25.09,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C49N T148H P161V",3
"lib2","SARS-CoV-2","GATGAGATAGAACAAC",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S P96D S139A G174Y",4
"lib2","SARS-CoV-2","GATGAGCAACAAGAGT",12,200.97,10.22,-0.62,0.04,2.77,1.04,0,"1 nonsynonymous","T100D",1
"lib2","SARS-CoV-2","GATGAGCACATGAACG",2,45.11,10.77,-0.06,0.05,3,1.02,0,">1 nonsynonymous","S41C I142V",2
"lib2","SARS-CoV-2","GATGAGCAGGTAGTAT",4,30.61,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","T15P N92R A105I D112K I138S",5
"lib2","SARS-CoV-2","GATGAGCGCTCCCTAA",4,33.33,10.11,-0.73,0.15,2.61,1.23,0.01,">1 nonsynonymous","S129D P149S G155R",3
"lib2","SARS-CoV-2","GATGAGGAAACAAACT",2,24.09,8.98,-1.86,0.16,1.95,1.13,0.01,">1 nonsynonymous","S45M K94R G116M",3
"lib2","SARS-CoV-2","GATGAGGGAAAAAACA",3,54.66,7.18,-3.66,0.15,1.5,1.09,0,">1 nonsynonymous","K94F G174C",2
"lib2","SARS-CoV-2","GATGAGGTATATCACT",4,41.16,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6R I88Y D97Q Y178K A192E T201D",6
"lib2","SARS-CoV-2","GATGAGGTGTTCTAAA",5,83.82,8.41,-2.43,0.12,2.96,1.02,0.01,">1 nonsynonymous","F62W Y175M",2
"lib2","SARS-CoV-2","GATGAGTAAAACTACA",1,20.91,10.78,-0.06,0.07,2.91,1.12,0,">1 nonsynonymous","S53L V173L",2
"lib2","SARS-CoV-2","GATGAGTACCAACGAT",8,30.74,6.05,-4.79,0.95,1.5,1.16,0.02,">1 nonsynonymous","S45K F99C C158V",3
"lib2","SARS-CoV-2","GATGAGTCTCAAAGAC",5,75.4,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35P P177Y",2
"lib2","SARS-CoV-2","GATGAGTGTACAATCC",6,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I Q84K S113P F134P",4
"lib2","SARS-CoV-2","GATGAGTTACCAGCTT",3,46.58,10.87,0.03,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGAGTTCCTTTTTG",7,15.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6K G51R G86M N107R",4
"lib2","SARS-CoV-2","GATGATAAAAACTACC",7,123.55,10.1,-0.73,0.03,2.89,1.03,0,">1 nonsynonymous","G155F S200Y",2
"lib2","SARS-CoV-2","GATGATAAACGCAACT",4,54.86,10.76,-0.07,0.06,2.93,1.05,0,">1 nonsynonymous","S41L Y91F Y143F V173L",4
"lib2","SARS-CoV-2","GATGATAAATATAAAT",1,26.06,10.81,-0.03,0.07,2.95,1.04,0,"1 nonsynonymous","N40W",1
"lib2","SARS-CoV-2","GATGATAACCGTTAAG",10,108.43,10.75,-0.09,0.04,2.88,1.12,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","GATGATAAGACCTAAG",2,13.22,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","P177N",1
"lib2","SARS-CoV-2","GATGATACATATAAAT",6,26.35,6.9,-3.94,0.26,1.51,1.04,0.02,">1 nonsynonymous","D90P D98H L122W T140S",4
"lib2","SARS-CoV-2","GATGATACTAGACTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* C49Q T100L F167M",4
"lib2","SARS-CoV-2","GATGATAGAGAATTCA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","I2H N130A P169*",3
"lib2","SARS-CoV-2","GATGATAGATGTGCTA",7,62.82,8.62,-2.21,0.15,1.82,1.15,0.01,">1 nonsynonymous","A42D D137G",2
"lib2","SARS-CoV-2","GATGATATAACAATGG",6,7.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103K D112L Y143V",3
"lib2","SARS-CoV-2","GATGATATAACATACC",6,44.49,6.69,-4.15,0.3,1.58,1.2,0.01,">1 nonsynonymous","P7E Y93H",2
"lib2","SARS-CoV-2","GATGATATATGAACGC",2,11.98,9.69,-1.15,0.07,2.91,1.1,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","GATGATATGTGAAGAG",15,59.25,9.11,-1.72,0.16,1.52,1.06,0.01,">1 nonsynonymous","W23L F134Y",2
"lib2","SARS-CoV-2","GATGATCACGGCACGC",2,21.56,9.79,-1.04,0.14,2.27,1,0.01,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","GATGATCACTGAATAA",12,57.77,10.71,-0.13,0.08,2.87,1.14,0,">1 nonsynonymous","G152L P197L",2
"lib2","SARS-CoV-2","GATGATCATATTGAGC",7,77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9Y N40K D97V G116E Y143K",5
"lib2","SARS-CoV-2","GATGATCGCGGCTTGA",3,76.86,10.97,0.14,0.03,3,1.01,0,"1 nonsynonymous","Q163G",1
"lib2","SARS-CoV-2","GATGATCGTTGAATTG",3,56.4,10.2,-0.64,0.07,2.52,1.02,0,">1 nonsynonymous","F44L K56V D97Q",3
"lib2","SARS-CoV-2","GATGATCTCAAACTAG",6,151.71,9.95,-0.89,0.08,2.34,1.06,0,">1 nonsynonymous","A18E R136L",2
"lib2","SARS-CoV-2","GATGATCTCAGTGACC",6,141.47,10.83,-0.01,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGATCTCCTACCCA",5,258.7,10.81,-0.02,0.05,2.96,1.07,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","GATGATGCAACGTTTG",12,86.96,10.87,0.03,0.04,2.93,1.06,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","GATGATGCACAATACC",6,51.66,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38E F70S",2
"lib2","SARS-CoV-2","GATGATGCCTACCAAG",11,41.07,6,-4.84,2,3,1.24,0.01,"1 nonsynonymous","V71D",1
"lib2","SARS-CoV-2","GATGATGCGTTAGAAG",5,71.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56S Y93P",2
"lib2","SARS-CoV-2","GATGATGTAAAAAAAG",3,31.76,10.77,-0.07,0.07,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GATGATGTTGCACTAC",9,81.54,10.87,0.03,0.04,2.98,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GATGATTAAGTCTTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60W P96R S129I Y159P",4
"lib2","SARS-CoV-2","GATGATTATAAATATA",3,142.39,10.32,-0.51,0.03,2.96,1.05,0,"1 nonsynonymous","A145I",1
"lib2","SARS-CoV-2","GATGATTTAGTGTATA",3,3.57,NA,NA,NA,NA,NA,NA,"stop","Q84G L122*",2
"lib2","SARS-CoV-2","GATGATTTCCATAAAT",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W D97N V103N Y121Q",4
"lib2","SARS-CoV-2","GATGCAAAACCTGCCC",13,78.53,6,-4.84,0.93,1.5,1.14,0.01,">1 nonsynonymous","N1C F12Q Y91M",3
"lib2","SARS-CoV-2","GATGCAAAATTATAAA",13,133.58,10.76,-0.07,0.03,2.96,1.05,0,">1 nonsynonymous","E141T K199N",2
"lib2","SARS-CoV-2","GATGCAAACTAAACAT",3,9.36,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14K F99Y D137M",3
"lib2","SARS-CoV-2","GATGCAAAGAATTATG",1,37.92,10.61,-0.23,0.06,2.97,1.03,0,">1 nonsynonymous","K128L T148V",2
"lib2","SARS-CoV-2","GATGCAACAATACATG",3,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65R D98R V103G",3
"lib2","SARS-CoV-2","GATGCAACCCCGGAAT",7,55.23,10.52,-0.32,0.05,2.93,1.1,0,">1 nonsynonymous","R78I T85N S200E",3
"lib2","SARS-CoV-2","GATGCAACTTTACATT",3,39.08,9.18,-1.65,0.1,2.69,1.07,0.01,">1 nonsynonymous","A33I K87I G116L P169A",4
"lib2","SARS-CoV-2","GATGCAAGAGCAGTAC",4,39.24,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S113L R136N",2
"lib2","SARS-CoV-2","GATGCAAGTAAGCCGT",3,21.76,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","C49I D112Y",2
"lib2","SARS-CoV-2","GATGCAATAAAACCCA",1,15.27,10.62,-0.21,0.07,2.98,1.04,0,"1 nonsynonymous","F62L",1
"lib2","SARS-CoV-2","GATGCAATCAGCCTAG",3,49.49,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G101L Y175P",2
"lib2","SARS-CoV-2","GATGCACAAAAGATCT",10,72.65,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P7L C102F Y123G K128S L162Y G172R",6
"lib2","SARS-CoV-2","GATGCACATTGTATGT",7,48.79,6.41,-4.42,0.48,1.5,1.22,0.02,">1 nonsynonymous","I104R K198S",2
"lib2","SARS-CoV-2","GATGCACATTTTATAT",3,34.92,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","C6A A105L S113Q L131M",4
"lib2","SARS-CoV-2","GATGCACCGGCGGGTT",5,76.67,10.54,-0.3,0.07,2.87,1.03,0,">1 nonsynonymous","A14I E141D",2
"lib2","SARS-CoV-2","GATGCACCTCATAAGG",4,52.65,10.67,-0.17,0.05,2.96,1.05,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","GATGCACTCTAAACCA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","C31I K56T G116* F156V A192*",5
"lib2","SARS-CoV-2","GATGCAGAATGGCCCC",1,0.72,NA,NA,NA,NA,NA,NA,"stop","G51F V52L N58S D90* F99S G196W",6
"lib2","SARS-CoV-2","GATGCAGGGTTTTAAG",18,293.52,10.43,-0.41,0.02,2.91,1.07,0,">1 nonsynonymous","C61N D98Y Q163H",3
"lib2","SARS-CoV-2","GATGCAGTACTTTGAT",20,135.84,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N4M K48S A89G K94N S129N",5
"lib2","SARS-CoV-2","GATGCAGTTTTATGTA",6,41.66,10.59,-0.25,0.08,2.82,1.15,0,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","GATGCATAACCACGGA",2,8.26,6,-4.84,2,3,1.17,0.03,">1 nonsynonymous","A33F C49L V77R K87L N107S R136Q G146V",7
"lib2","SARS-CoV-2","GATGCATCAAAGGCTT",1,41.9,10.34,-0.5,0.03,2.93,1.01,0,">1 nonsynonymous","T63Y I138G",2
"lib2","SARS-CoV-2","GATGCATCACTTGTAT",8,124.16,9.77,-1.07,0.08,1.96,1.02,0,">1 nonsynonymous","F8I A81N",2
"lib2","SARS-CoV-2","GATGCATTATAACACG",12,122.76,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F62R L95R P177L",3
"lib2","SARS-CoV-2","GATGCATTGACCGTTT",1,15.16,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","GATGCCAAAAGCCGAT",3,76.88,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V37A G172Q",2
"lib2","SARS-CoV-2","GATGCCAACATAACGT",3,37.23,8.49,-2.35,0.29,1.5,1,0.03,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","GATGCCAATCCAGCGG",1,29.14,10.79,-0.04,0.09,2.78,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGCCACTAATTGGG",3,26.3,8.07,-2.76,0.25,2.12,1.08,0.02,">1 nonsynonymous","R27A Y165T",2
"lib2","SARS-CoV-2","GATGCCACTAGATCCA",2,47.18,10.75,-0.08,0.05,3,1.03,0,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","GATGCCAGCTTCTCAA",5,40.67,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F8I Y21T A33R Y119V",4
"lib2","SARS-CoV-2","GATGCCAGTCCTTTCA",6,1.68,NA,NA,NA,NA,NA,NA,"stop","F47C G86S Y91* T140W",4
"lib2","SARS-CoV-2","GATGCCATACTAAAAT",6,50.28,9.46,-1.38,0.07,1.91,1.04,0,">1 nonsynonymous","Y66F W106L G196E",3
"lib2","SARS-CoV-2","GATGCCATTTGTGCCC",4,39.94,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A33P N64R A81Q L122T N157Y",5
"lib2","SARS-CoV-2","GATGCCCATTGGTCAA",7,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S K94F",2
"lib2","SARS-CoV-2","GATGCCCCGACACCTA",2,38.41,7.66,-3.17,0.25,1.5,1.12,0.02,">1 nonsynonymous","Y35P A105Q",2
"lib2","SARS-CoV-2","GATGCCCTACTCAACT",4,49.01,6.14,-4.7,0.98,1.5,1.21,0.03,">1 nonsynonymous","I28A W106H",2
"lib2","SARS-CoV-2","GATGCCGAAATCACAT",6,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W N13E Y119C D137L",4
"lib2","SARS-CoV-2","GATGCCGACAGATTTC",1,92.35,10.82,-0.02,0.06,2.93,1.08,0,">1 nonsynonymous","D59W P197T",2
"lib2","SARS-CoV-2","GATGCCTAAACAGCGG",9,158.47,10.74,-0.1,0.04,2.91,1.09,0,"1 nonsynonymous","V173W",1
"lib2","SARS-CoV-2","GATGCCTCAGTACGAC",1,46.11,10.25,-0.58,0.09,2.68,1.07,0,">1 nonsynonymous","S69R P197G",2
"lib2","SARS-CoV-2","GATGCCTTAAAGTACT",2,1.09,NA,NA,NA,NA,NA,NA,"stop","I2Y T15L R27* K132I T148I",5
"lib2","SARS-CoV-2","GATGCGAATTCACATT",1,0.6,NA,NA,NA,NA,NA,NA,"stop","W23E K87*",2
"lib2","SARS-CoV-2","GATGCGACAACATGTT",2,15.85,8.88,-1.96,0.57,1.5,1.16,0.05,">1 nonsynonymous","A81T G116M T140D",3
"lib2","SARS-CoV-2","GATGCGACATACTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14* R27Y F70Q",3
"lib2","SARS-CoV-2","GATGCGAGTGCTTAAA",7,59.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12Y S19T C61F V77R",4
"lib2","SARS-CoV-2","GATGCGATCCCTCTAA",1,52.03,10.52,-0.32,0.17,2.61,1.27,0.01,"1 nonsynonymous","K114C",1
"lib2","SARS-CoV-2","GATGCGGACCGACCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K F99L G172E",3
"lib2","SARS-CoV-2","GATGCGTCTTCCCCTA",1,5.44,10.92,0.08,0.24,2.8,1,0.01,">1 nonsynonymous","A42R D59L K114R",3
"lib2","SARS-CoV-2","GATGCGTTAGCGTGGC",3,28.38,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","P7D C61I K114P E135M Y165V K199L",6
"lib2","SARS-CoV-2","GATGCTAAAATGCAAA",6,18.19,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","C6Y D112A G155C",3
"lib2","SARS-CoV-2","GATGCTAATATAAGCG",13,86.05,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R16A D97L P133L Y165T",4
"lib2","SARS-CoV-2","GATGCTAATGCTAAGA",7,123.35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y50M F167Y",2
"lib2","SARS-CoV-2","GATGCTAGGAAAGGTC",3,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43G V103N S139Q",3
"lib2","SARS-CoV-2","GATGCTATATTACTGA",8,142.16,10.93,0.09,0.06,2.94,1.08,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","GATGCTCAAAGTAACC",8,63.29,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","E10V D98K W106L Q144L",4
"lib2","SARS-CoV-2","GATGCTCTTCCAACGT",1,11.77,9.82,-1.02,0.21,2.27,1.12,0.01,">1 nonsynonymous","N64F S113A",2
"lib2","SARS-CoV-2","GATGCTCTTCGAATAC",1,15.84,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T15L Y35N L60M D112Q",4
"lib2","SARS-CoV-2","GATGCTGAAAAGCTAC",3,0.38,NA,NA,NA,NA,NA,NA,"stop","R25D A67T N107* N171H",4
"lib2","SARS-CoV-2","GATGCTGAAGGTAAAA",5,19.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I28T D68K D98G Q163P",4
"lib2","SARS-CoV-2","GATGCTGAGAATATGA",1,12.41,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","C6P V32L N40Y C49L K56I A81S F126L S139T P149H",9
"lib2","SARS-CoV-2","GATGCTTAATGTATGA",13,68.89,9.6,-1.24,0.08,1.89,1,0,">1 nonsynonymous","A14L N58Y D97L",3
"lib2","SARS-CoV-2","GATGCTTACCAGTCAA",2,29.78,10.48,-0.35,0.04,2.93,1.05,0,"1 nonsynonymous","F44Q",1
"lib2","SARS-CoV-2","GATGCTTCTTATAAAA",4,39.04,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F17P W106S S113Q",3
"lib2","SARS-CoV-2","GATGCTTTCACGGAAT",7,39.16,6,-4.84,2,3,1.05,0,">1 nonsynonymous","P7E L95R G117T",3
"lib2","SARS-CoV-2","GATGGAACCATGGAAA",5,16.58,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A42M V65A A89F L122P",4
"lib2","SARS-CoV-2","GATGGAACTATCATTC",2,28.45,9.44,-1.39,0.19,1.77,1.07,0.02,"1 nonsynonymous","F17R",1
"lib2","SARS-CoV-2","GATGGAACTCGACACT",1,7.66,10.81,-0.03,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGGAAGCGGTGCAA",16,99.16,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A81T A105D E141N S147M",4
"lib2","SARS-CoV-2","GATGGAATATTCCGAA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","I2* N107G E141I",3
"lib2","SARS-CoV-2","GATGGACACAAAGTCA",4,63.02,10.64,-0.2,0.08,2.8,1.06,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GATGGACACGCGCACG",3,94.2,8.76,-2.08,0.05,2.8,1.12,0,">1 nonsynonymous","A81G K128V N157D",3
"lib2","SARS-CoV-2","GATGGACCGACCCAAG",1,16.41,10.7,-0.13,0.09,2.86,1.12,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GATGGACGTAGTTAGG",7,54.92,9.62,-1.21,0.12,2.44,1.05,0.01,">1 nonsynonymous","N30T L122Q S129N E135A V173P",5
"lib2","SARS-CoV-2","GATGGAGCAAGAAGCA",5,72.33,10.82,-0.01,0.06,2.96,1.05,0,">1 nonsynonymous","L122R K132Y T148V",3
"lib2","SARS-CoV-2","GATGGAGCACAGCTGA",5,12.65,6.19,-4.65,2,1.5,1.05,0.01,">1 nonsynonymous","C6R N24S K56L A89T A105V",5
"lib2","SARS-CoV-2","GATGGAGGCTAAATAT",10,103.1,9.13,-1.71,0.04,2.82,1.05,0,">1 nonsynonymous","K87N G116R S129N P149V S184I",5
"lib2","SARS-CoV-2","GATGGAGTTTAGAGGT",1,11.09,6,-4.84,2,3,1.03,0,">1 nonsynonymous","E10W N107L D112M L131R Y143N",5
"lib2","SARS-CoV-2","GATGGATATCGGGATA",5,55.03,10.8,-0.04,0.07,2.93,1.05,0,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","GATGGATATTTTCGAT",7,61.07,6,-4.84,1.98,1.5,1.13,0.01,">1 nonsynonymous","N92L Y175V",2
"lib2","SARS-CoV-2","GATGGCAACAAGTAGA",5,1.42,NA,NA,NA,NA,NA,NA,"stop","I2S V37F C61* D98S",4
"lib2","SARS-CoV-2","GATGGCCATACAGGAC",2,62.78,10.43,-0.41,0.08,2.83,1.19,0,">1 nonsynonymous","G9Y Y66V Y175F",3
"lib2","SARS-CoV-2","GATGGCCGACCCACTA",6,167.58,10.43,-0.4,0.05,2.93,1.07,0,">1 nonsynonymous","C61M K114C",2
"lib2","SARS-CoV-2","GATGGCCTCCTCACTA",3,1543.03,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","Y66P",1
"lib2","SARS-CoV-2","GATGGCGTAACGCAGA",34,527.85,10.09,-0.75,0.06,2.49,1.02,0,">1 nonsynonymous","P7N F47L W106V T201F",4
"lib2","SARS-CoV-2","GATGGCGTAATGCACT",3,82.67,9.93,-0.91,0.04,2.91,1.03,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","GATGGCTAGGTTTAAT",11,2.59,NA,NA,NA,NA,NA,NA,"stop","A42* V153P G174K V180M T201F",5
"lib2","SARS-CoV-2","GATGGCTTTACCCTTT",7,117.61,10.42,-0.41,0.05,2.87,1.07,0,"1 nonsynonymous","N107P",1
"lib2","SARS-CoV-2","GATGGGAACCCGGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","C6E D137* Q168F T201D",4
"lib2","SARS-CoV-2","GATGGGACGACAGCCA",5,17.45,NA,NA,NA,NA,NA,NA,"stop","T100K A105*",2
"lib2","SARS-CoV-2","GATGGGAGATCGAGTT",2,48.27,10.72,-0.12,0.05,2.91,1.11,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","GATGGGATACACAAAC",4,155.78,9.82,-1.02,0.04,2.47,1.04,0,">1 nonsynonymous","L38H Q84M",2
"lib2","SARS-CoV-2","GATGGGCATGTTGGTT",11,62.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A42W D59I K94F P161T",4
"lib2","SARS-CoV-2","GATGGGCGAGTCATAT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","R25S V37* P149S F167W",4
"lib2","SARS-CoV-2","GATGGGCGTAACATAA",8,4.1,NA,NA,NA,NA,NA,NA,"stop","N13H V20* A67D G86R Y91R V103H S184N",7
"lib2","SARS-CoV-2","GATGGGCTCAGGATTT",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97E A105T G152Y",3
"lib2","SARS-CoV-2","GATGGGTCAATAATCA",7,133.57,10.12,-0.72,0.05,2.79,1.04,0,">1 nonsynonymous","L57F D98S",2
"lib2","SARS-CoV-2","GATGGGTCCATGATGG",2,0.62,NA,NA,NA,NA,NA,NA,"stop","V103* G116A P133C",3
"lib2","SARS-CoV-2","GATGGGTCGTCAAAAG",6,58.48,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N58S D97Y S139D N157Y",4
"lib2","SARS-CoV-2","GATGGTAAACTAACGA",9,2.11,NA,NA,NA,NA,NA,NA,"stop","T3F A42K F99*",3
"lib2","SARS-CoV-2","GATGGTAATTGCGGTC",2,131.22,9.82,-1.01,0.06,2.16,1.08,0,">1 nonsynonymous","S69H A192F",2
"lib2","SARS-CoV-2","GATGGTAGAATGTGAT",1,12.81,10.78,-0.06,0.07,2.95,1.07,0,"1 nonsynonymous","K132F",1
"lib2","SARS-CoV-2","GATGGTCATATATGCC",5,98.56,6,-4.84,1.77,1.5,1.29,0.03,">1 nonsynonymous","G101Y S139V Y159E Y178R",4
"lib2","SARS-CoV-2","GATGGTCCAGGTCTCT",7,220.91,10.64,-0.19,0.04,2.87,1.09,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","GATGGTCCGAATAAAC",3,30.02,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","K56R P82E I88E N92P F99S L122R",6
"lib2","SARS-CoV-2","GATGGTGACAATGGTA",2,71.68,10.78,-0.05,0.06,2.95,1.04,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","GATGGTGACAGCACTG",4,29.11,10.78,-0.06,0.07,2.97,1.07,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","GATGGTGACTATATTT",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y D34L P82H D97V Y119G D137F",6
"lib2","SARS-CoV-2","GATGGTGATAATGCGT",4,57.09,10.8,-0.04,0.07,2.82,1.17,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","GATGGTTATGTTGTAT",18,323.92,10.53,-0.31,0.04,2.95,1.04,0,"1 nonsynonymous","D98I",1
"lib2","SARS-CoV-2","GATGGTTGAAAAAGCC",4,29.59,6,-4.84,1.84,1.5,1.07,0,">1 nonsynonymous","N40C L95V L183A A190C",4
"lib2","SARS-CoV-2","GATGGTTGAACGGATC",1,2.6,NA,NA,NA,NA,NA,NA,"stop","V115*",1
"lib2","SARS-CoV-2","GATGTAAAAACCTTTA",5,4.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N Y66N V71Q F99Y G101P G166K",6
"lib2","SARS-CoV-2","GATGTAAAACCGAATA",5,216.22,10.8,-0.04,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGTAAAACGATATA",6,44.46,9.36,-1.48,0.11,1.77,1.08,0.01,">1 nonsynonymous","S69D S184Y",2
"lib2","SARS-CoV-2","GATGTAAACGTATTTA",1,47.4,10.33,-0.5,0.08,2.76,1.07,0,">1 nonsynonymous","A14D N130Y V173K",3
"lib2","SARS-CoV-2","GATGTAACGAAGTCGA",3,28.7,9.97,-0.87,0.12,2.39,1,0,">1 nonsynonymous","P7L T15I",2
"lib2","SARS-CoV-2","GATGTAAGAACCTTCA",6,1.88,NA,NA,NA,NA,NA,NA,"stop","R78* F156S",2
"lib2","SARS-CoV-2","GATGTAAGCGCAAATA",1,17.8,10.87,0.03,0.08,3,1.02,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","GATGTAAGGCCGGTTT",3,86.59,9.92,-0.91,0.04,2.51,1.05,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","GATGTAAGTTGAACTA",7,0.33,NA,NA,NA,NA,NA,NA,"stop","C61* F99T",2
"lib2","SARS-CoV-2","GATGTAATTACAATAT",9,76.4,10.77,-0.07,0.03,2.98,1.04,0,">1 nonsynonymous","K114L T148R",2
"lib2","SARS-CoV-2","GATGTACAAAGCAGTA",1,35.24,8.52,-2.32,0.19,1.58,1.13,0.02,">1 nonsynonymous","N13H K48Y K87G Y123F F156V",5
"lib2","SARS-CoV-2","GATGTACCCAGATCTT",12,143.35,10.86,0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGTACGCGACAGAT",2,1.82,NA,NA,NA,NA,NA,NA,"stop","I2M I28* T55L V71E E135T T170S",6
"lib2","SARS-CoV-2","GATGTACTTTAAACCT",7,17.27,6.29,-4.55,0.52,1.5,1.06,0.02,">1 nonsynonymous","I2L K56F A105D",3
"lib2","SARS-CoV-2","GATGTATCAGAGGGAT",5,21.39,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","C102R N151D",2
"lib2","SARS-CoV-2","GATGTATCAGTCTAAA",4,10.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N40D F70P Y93S",3
"lib2","SARS-CoV-2","GATGTATGACGGATAT",4,48.53,7.79,-3.05,0.12,1.85,1.07,0.01,">1 nonsynonymous","A33R W106K T170E",3
"lib2","SARS-CoV-2","GATGTATTATTATACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Q K94N F99Y N130W",4
"lib2","SARS-CoV-2","GATGTATTCGACCCGC",2,22.52,10.62,-0.21,0.05,2.97,1.03,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","GATGTATTCTAAGATG",19,82.55,6,-4.84,1.81,3,1.14,0,">1 nonsynonymous","C49P A105S Y159S",3
"lib2","SARS-CoV-2","GATGTCAAAACGCGAG",3,193.31,9.68,-1.15,0.06,1.9,1.04,0,"1 nonsynonymous","I28E",1
"lib2","SARS-CoV-2","GATGTCAACATCTGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G83N N92* N157S K198T",4
"lib2","SARS-CoV-2","GATGTCAGCCCCGACT",5,18.21,8.8,-2.04,0.25,1.65,1.11,0.02,">1 nonsynonymous","D97I R127L",2
"lib2","SARS-CoV-2","GATGTCAGCTCACTAA",3,180.18,10.45,-0.39,0.04,2.89,1.11,0,">1 nonsynonymous","K87M T201R",2
"lib2","SARS-CoV-2","GATGTCATGACACTGA",7,104.3,9.99,-0.85,0.04,2.85,1.05,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","GATGTCCAAATGAACT",6,27.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P96L G101S G166F",3
"lib2","SARS-CoV-2","GATGTCCGATACCAAG",7,159.53,8.45,-2.39,0.2,1.5,1.03,0.02,">1 nonsynonymous","R25G T100K",2
"lib2","SARS-CoV-2","GATGTCCGGTTCCTTT",5,33.79,6.34,-4.5,0.9,1.5,1.2,0.05,">1 nonsynonymous","I80A A105H",2
"lib2","SARS-CoV-2","GATGTCCTCCAACAGT",8,435.9,10.83,0,0.04,2.95,1.06,0,">1 nonsynonymous","K56V F160K T201S",3
"lib2","SARS-CoV-2","GATGTCCTTACGAATA",5,5.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26N G51I C61L Y123N P177H",5
"lib2","SARS-CoV-2","GATGTCGATCAAAGTC",9,92.29,9,-1.84,0.18,1.5,1.01,0.02,">1 nonsynonymous","N4W T55S F99L",3
"lib2","SARS-CoV-2","GATGTCGCTTCAAAGA",9,92.68,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V77S Y121E S164V",3
"lib2","SARS-CoV-2","GATGTCTAGAACTTGT",1,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K N110L E154Q",3
"lib2","SARS-CoV-2","GATGTCTAGATGCATT",7,28.45,8.18,-2.66,0.21,2.08,1.09,0.02,"1 nonsynonymous","C158K",1
"lib2","SARS-CoV-2","GATGTCTATTGAGTTT",1,20.19,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","R124C E154D",2
"lib2","SARS-CoV-2","GATGTCTCAACAGAAG",13,248.6,10.84,0,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGTCTGCCAAGCAC",10,52.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V52Q G101N Y119H T170L R179S",5
"lib2","SARS-CoV-2","GATGTCTGCTAAAAAC",4,67.87,10.86,0.02,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGTCTTAATTTAAG",4,0.02,NA,NA,NA,NA,NA,NA,"stop","D68Q D97N Y119* E154G G166Y",5
"lib2","SARS-CoV-2","GATGTGAAGACAAAAA",7,28.17,6,-4.84,0.76,2.53,1.12,0.01,">1 nonsynonymous","C61R I88K T100N",3
"lib2","SARS-CoV-2","GATGTGAGCCAAAATA",7,109.77,8.4,-2.43,0.11,2.85,1.06,0.01,">1 nonsynonymous","T3F T100I G166E",3
"lib2","SARS-CoV-2","GATGTGAGGCTTGTCT",4,76.64,10.05,-0.79,0.04,2.81,1.11,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","GATGTGAGTTAAAGCA",11,151.21,10.28,-0.55,0.04,2.8,1.06,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GATGTGATGAACGTAA",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D P96L D137T",3
"lib2","SARS-CoV-2","GATGTGATGAGGCGGT",1,19.5,9.5,-1.33,0.2,1.97,1.04,0.01,">1 nonsynonymous","A89F T201I",2
"lib2","SARS-CoV-2","GATGTGCACTCCAGTG",4,12.21,10.37,-0.46,0.11,2.89,1,0.01,">1 nonsynonymous","A14S S45N S129H",3
"lib2","SARS-CoV-2","GATGTGCGATAACATA",4,29.38,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F134N V180F",2
"lib2","SARS-CoV-2","GATGTGCTAATAAATT",29,414.36,10.4,-0.43,0.02,2.94,1.06,0,"1 nonsynonymous","P169L",1
"lib2","SARS-CoV-2","GATGTGCTACTGCTAC",6,45.09,6.13,-4.71,0.49,1.5,1.1,0.01,">1 nonsynonymous","Y50P S129L",2
"lib2","SARS-CoV-2","GATGTGGAAATTCTTG",1,24.71,8.91,-1.93,0.19,2.41,1.36,0.01,">1 nonsynonymous","C61M V153Q Q176A",3
"lib2","SARS-CoV-2","GATGTGGAGATTTATA",13,31.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55V T63G V103Y P169L P197V",5
"lib2","SARS-CoV-2","GATGTGGTAAACTGTG",4,5.89,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S41G D68L F99Q N151C F160G",5
"lib2","SARS-CoV-2","GATGTGGTCAATAAAC",8,74.9,8.97,-1.86,0.06,2.9,1.09,0,">1 nonsynonymous","G117L F160Q",2
"lib2","SARS-CoV-2","GATGTGTTTAGAACAA",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S T63M T100A S113P S129G Y159S",6
"lib2","SARS-CoV-2","GATGTTAAAAATCAGA",9,61.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K48E S69V P161W",3
"lib2","SARS-CoV-2","GATGTTAACACAGGCT",6,27.96,10.5,-0.34,0.08,3,1,0,"1 nonsynonymous","S129P",1
"lib2","SARS-CoV-2","GATGTTAAGAGTTTCA",1,31.78,6,-4.84,1.72,1.5,1.18,0.06,">1 nonsynonymous","S113M E135V",2
"lib2","SARS-CoV-2","GATGTTAAGGATTTTC",3,15.83,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","I72S",1
"lib2","SARS-CoV-2","GATGTTAATGAATGCT",5,2.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GATGTTACAAAAAAAA",1,38.6,10.55,-0.28,0.05,2.96,1.01,0,">1 nonsynonymous","A22L T201M",2
"lib2","SARS-CoV-2","GATGTTACATAGCCGA",2,12.19,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N64L E154T R179I",3
"lib2","SARS-CoV-2","GATGTTACCCTAAAAG",2,25.84,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","G86R F99Y",2
"lib2","SARS-CoV-2","GATGTTACGGCAAAAC",9,174.25,10.78,-0.06,0.05,2.89,1.08,0,"1 nonsynonymous","S184H",1
"lib2","SARS-CoV-2","GATGTTAGAGAACAAT",18,176.48,10.82,-0.01,0.04,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATGTTAGATCGCCGG",12,52.68,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","L95R N157H G174D S200A",4
"lib2","SARS-CoV-2","GATGTTCACAGTTTCT",7,80.94,9.44,-1.4,0.06,2.86,1.06,0,">1 nonsynonymous","V37S N118I",2
"lib2","SARS-CoV-2","GATGTTCACGTATCAG",8,57.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6D V11A P96W T140R",4
"lib2","SARS-CoV-2","GATGTTCCCTCCACTA",2,7.68,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","S41L I88W V103R",3
"lib2","SARS-CoV-2","GATGTTCCGGAGCTTT",15,287.99,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P54K D90S D112T Y175R",4
"lib2","SARS-CoV-2","GATGTTCGAGAACACT",1,8.55,6.42,-4.42,2,3,1.16,0.01,">1 nonsynonymous","L95R Y121S",2
"lib2","SARS-CoV-2","GATGTTGTTCTGTTCT",7,50.33,10.83,-0.01,0.06,2.93,1.1,0,"1 nonsynonymous","Q163S",1
"lib2","SARS-CoV-2","GATGTTGTTTTCATGT",3,78.14,10.53,-0.3,0.04,2.9,1.1,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","GATGTTTATAGTAACC",5,55.34,8.35,-2.48,0.12,2.65,1.03,0.01,">1 nonsynonymous","A18T F126G",2
"lib2","SARS-CoV-2","GATGTTTCTAAAAAAA",2,49.46,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","GATGTTTGAACGTTAA",4,44.85,9.68,-1.15,0.1,1.98,1.06,0,">1 nonsynonymous","E10G K56P K128T",3
"lib2","SARS-CoV-2","GATGTTTGGACGTCAA",1,30.08,10.77,-0.06,0.04,2.95,1.07,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","GATTAAAAAAGATTAC",5,85.34,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D34Y C150V Y178T",3
"lib2","SARS-CoV-2","GATTAAAAACGTCAAA",5,0.33,NA,NA,NA,NA,NA,NA,"stop","N4L G51N G83M K87* Y165L",5
"lib2","SARS-CoV-2","GATTAAAAATCAAGAA",9,94.19,9.86,-0.97,0.08,2.18,1.08,0,"1 nonsynonymous","S69L",1
"lib2","SARS-CoV-2","GATTAAAACTCCGGAT",2,31.01,6,-4.84,1.66,3,1.13,0,">1 nonsynonymous","L60S D90Y N107V Y119C",4
"lib2","SARS-CoV-2","GATTAAAATAGGCTTA",3,40.31,6,-4.84,1.02,1.5,1.22,0.01,">1 nonsynonymous","S69R G83I D90N A105N G146L",5
"lib2","SARS-CoV-2","GATTAAAATATAGCAG",2,85.88,8.95,-1.89,0.09,2.73,1.03,0,">1 nonsynonymous","L122W G146M",2
"lib2","SARS-CoV-2","GATTAAAATCCCGCTA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112F",1
"lib2","SARS-CoV-2","GATTAAACAAAACCGG",4,98.49,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38T G166A G172V",3
"lib2","SARS-CoV-2","GATTAAACAGGACATC",3,36.67,7.44,-3.4,0.27,1.5,1,0.02,">1 nonsynonymous","L5R S41Y T63L N157V V173L",5
"lib2","SARS-CoV-2","GATTAAACCACGAAGG",8,91.2,10.81,-0.03,0.04,2.97,1.05,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","GATTAAACGCACTATT",5,29.91,6.56,-4.28,0.45,1.5,1.11,0.02,">1 nonsynonymous","Y21I G51E S113D N120L",4
"lib2","SARS-CoV-2","GATTAAACTATCGCGA",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C C49L",2
"lib2","SARS-CoV-2","GATTAAAGTGTACGGT",2,61.65,8.72,-2.12,0.07,2.76,1.12,0,">1 nonsynonymous","Y143C T201F",2
"lib2","SARS-CoV-2","GATTAAATCGAACTCT",3,28.73,10.88,0.04,0.06,2.91,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTAAATCTTCAGCT",6,61.79,6.36,-4.48,0.63,1.5,1.16,0.03,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","GATTAAATTAAATCGG",2,32.63,9.95,-0.88,0.06,2.92,1.04,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","GATTAACAACATTATT",1,6.07,10.65,-0.18,0.11,2.8,1.22,0.01,"1 nonsynonymous","T3E",1
"lib2","SARS-CoV-2","GATTAACAATAACAAT",2,44.05,10.89,0.06,0.05,3,1.02,0,"1 nonsynonymous","P197A",1
"lib2","SARS-CoV-2","GATTAACACGTTTCTA",2,30.08,9.44,-1.4,0.09,1.97,1.08,0,">1 nonsynonymous","G51A Y121M",2
"lib2","SARS-CoV-2","GATTAACATGTGTAAC",3,18.86,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43V D98L S139I",3
"lib2","SARS-CoV-2","GATTAACCAAAGCAAA",5,32.83,7.35,-3.48,0.22,1.5,1.1,0.02,">1 nonsynonymous","S36G I88L S129F P169Y",4
"lib2","SARS-CoV-2","GATTAACCGAACAGTT",9,241.95,10.86,0.02,0.06,2.94,1.06,0,">1 nonsynonymous","I2E S129R",2
"lib2","SARS-CoV-2","GATTAACCGCGAGACA",2,100.6,10.71,-0.13,0.04,2.95,1.04,0,"1 nonsynonymous","N120F",1
"lib2","SARS-CoV-2","GATTAACGAATCACTA",1,15.86,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","C49S F99Y V115L Y143R V173A",5
"lib2","SARS-CoV-2","GATTAACGTCGAAAAC",4,12.03,9.21,-1.63,0.22,1.62,1.11,0.02,">1 nonsynonymous","V32G V77R",2
"lib2","SARS-CoV-2","GATTAACTAATGGATA",6,40.42,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19P D34G V71A A81D P161A",5
"lib2","SARS-CoV-2","GATTAACTATATTGGT",9,46.5,10.32,-0.52,0.15,2.28,1.05,0.01,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","GATTAACTCCAGTAAT",1,6.48,9.86,-0.97,0.28,1.81,1.11,0.03,">1 nonsynonymous","N107A G152F",2
"lib2","SARS-CoV-2","GATTAACTGATTTACA",15,111.81,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","C31F F44S L131S S147Y G172N P197T",6
"lib2","SARS-CoV-2","GATTAAGAAAAGAATG",8,36.31,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","L60P W106L Y159N",3
"lib2","SARS-CoV-2","GATTAAGAACAGAATG",1,0.89,NA,NA,NA,NA,NA,NA,"stop","I2* G86A",2
"lib2","SARS-CoV-2","GATTAAGAGTCGGGTG",9,206.34,10.73,-0.11,0.02,2.95,1.06,0,"1 nonsynonymous","S36I",1
"lib2","SARS-CoV-2","GATTAAGATGAGAAAG",1,46.39,10.94,0.1,0.05,3,1.01,0,"1 nonsynonymous","P197R",1
"lib2","SARS-CoV-2","GATTAAGATTGGTTTA",4,16.24,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","N58L F99S",2
"lib2","SARS-CoV-2","GATTAAGCAATACGGT",6,45.81,10.12,-0.71,0.02,2.93,1.08,0,">1 nonsynonymous","D59T Q168M",2
"lib2","SARS-CoV-2","GATTAAGCACGCTACT",7,18.71,6.56,-4.28,0.23,1.5,1.04,0.02,">1 nonsynonymous","A18H G51Y N64K E135I V181R",5
"lib2","SARS-CoV-2","GATTAAGCCCACTCGT",6,68.48,9.46,-1.38,0.13,1.64,1.09,0.01,">1 nonsynonymous","N4M T100E G116P K128M",4
"lib2","SARS-CoV-2","GATTAAGGAACTGAAA",1,41.94,10.71,-0.13,0.1,2.72,1.11,0,">1 nonsynonymous","G83C N130T",2
"lib2","SARS-CoV-2","GATTAAGGATCGAACG",7,42.32,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L38H F167T G172V",3
"lib2","SARS-CoV-2","GATTAAGTACTCATAC",5,112.12,7.02,-3.81,0.26,1.5,1.09,0.01,">1 nonsynonymous","V37G S129T P149Q G155I Y165F",5
"lib2","SARS-CoV-2","GATTAAGTCTCAAAAA",3,42.94,6,-4.84,2,3,1.19,0,">1 nonsynonymous","T3C N30P T55N S69Q D97A N130I G155L",7
"lib2","SARS-CoV-2","GATTAAGTGCTATTGC",10,155.02,10.3,-0.54,0.05,2.87,1.07,0,">1 nonsynonymous","L60V G152L",2
"lib2","SARS-CoV-2","GATTAAGTTTTGAGGG",4,90.9,9.36,-1.48,0.05,2.91,1.06,0,"1 nonsynonymous","E154F",1
"lib2","SARS-CoV-2","GATTAATAACCATATA",2,10.49,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","L95H R127L N151I",3
"lib2","SARS-CoV-2","GATTAATAAGTTTTTA",4,69.83,10.11,-0.72,0.05,2.92,1,0,">1 nonsynonymous","N40F L125W",2
"lib2","SARS-CoV-2","GATTAATACCTAAACT",9,237.21,10.88,0.05,0.05,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GATTAATATGGTAGTG",2,13,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","I80E",1
"lib2","SARS-CoV-2","GATTAATCAACTGTCC",3,42.09,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D90P N120L",2
"lib2","SARS-CoV-2","GATTAATGAAAGCTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L60* I142A G152V",3
"lib2","SARS-CoV-2","GATTAATGAATACTAT",3,17.77,6,-4.84,1.95,3,1.13,0.01,">1 nonsynonymous","T100S A105L R127C I142M N151F",5
"lib2","SARS-CoV-2","GATTAATTTGTACGTT",9,214.39,8.89,-1.95,0.06,2.89,1.12,0,">1 nonsynonymous","T170V K199L",2
"lib2","SARS-CoV-2","GATTACAAAAAACTGA",2,25.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F17V Y21K",2
"lib2","SARS-CoV-2","GATTACAAATGTTTAT",2,72.61,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32A K94L K128I F167P",4
"lib2","SARS-CoV-2","GATTACAACAAACAAA",8,129.93,10.69,-0.15,0.03,2.94,1.07,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","GATTACAAGATGCCAC",5,88.27,10.25,-0.58,0.05,2.8,1.09,0,">1 nonsynonymous","S139L T201S",2
"lib2","SARS-CoV-2","GATTACAATACAACCA",15,14.65,7.89,-2.95,0.39,2.03,1.26,0.07,">1 nonsynonymous","F47S P54N L183N",3
"lib2","SARS-CoV-2","GATTACACCAGACAAA",4,34.18,6,-4.84,2,3,1.25,0.03,">1 nonsynonymous","S69R I88Q Y143P",3
"lib2","SARS-CoV-2","GATTACACTGCTCTGT",3,1.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71K",1
"lib2","SARS-CoV-2","GATTACAGAAACAATA",2,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A Y50F V180P",3
"lib2","SARS-CoV-2","GATTACAGTGCCTACC",1,28.79,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y119P F126V K132D G146F P169Q",5
"lib2","SARS-CoV-2","GATTACATAAACGCGA",7,29.06,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","F8T F12L S19V D68C S200G",5
"lib2","SARS-CoV-2","GATTACATAAATCGCT",6,38.16,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","V20L F44L E154N",3
"lib2","SARS-CoV-2","GATTACATAACAAGTT",3,43.8,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","E10S T46P I80L",3
"lib2","SARS-CoV-2","GATTACATATAAAAGT",2,34.68,10.87,0.03,0.06,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTACATCCGTCGGC",9,62.88,7.99,-2.84,0.25,1.5,1.07,0.02,">1 nonsynonymous","A18T S113L",2
"lib2","SARS-CoV-2","GATTACATCTCAGCCA",5,50.18,10.01,-0.83,0.07,1.98,1.05,0,">1 nonsynonymous","L60F P82V",2
"lib2","SARS-CoV-2","GATTACATTATAATCC",8,126.95,10.79,-0.04,0.05,2.91,1.1,0,"1 nonsynonymous","L5V",1
"lib2","SARS-CoV-2","GATTACATTGAATAAA",10,41.26,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N4K S19I G146K",3
"lib2","SARS-CoV-2","GATTACCAAAAATAAC",2,33.27,10.96,0.12,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTACCCAATCAGGA",5,62.89,10.68,-0.16,0.03,2.96,1.05,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","GATTACCCAATCCCGA",5,47.12,10,-0.84,0.06,2.49,1.04,0,">1 nonsynonymous","R16M P133K",2
"lib2","SARS-CoV-2","GATTACCGAAAATATG",14,179.91,10.63,-0.2,0.05,2.87,1.13,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","GATTACGAAGATATCA",5,190.15,10.22,-0.61,0.04,2.72,1.11,0,">1 nonsynonymous","C102L L122T",2
"lib2","SARS-CoV-2","GATTACGACTCCAAAT",3,41.93,10.08,-0.75,0.07,2.8,1.01,0,">1 nonsynonymous","S43L Q144F",2
"lib2","SARS-CoV-2","GATTACGACTTTACCA",6,32.58,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N64E P82S D98I D112N A145M",5
"lib2","SARS-CoV-2","GATTACGATACTCCCT",8,133.18,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A42W V77G F99D Q176F",4
"lib2","SARS-CoV-2","GATTACGCAAGAGGTT",11,117.47,10.83,-0.01,0.07,2.9,1.13,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","GATTACGCAGGTTATT",2,87,10.5,-0.34,0.06,2.9,1.05,0,">1 nonsynonymous","D98F L122V",2
"lib2","SARS-CoV-2","GATTACGCTTTTGAAA",10,211.74,8.39,-2.44,0.11,2.47,1.05,0,">1 nonsynonymous","V11F Y35I N64S A145P",4
"lib2","SARS-CoV-2","GATTACGGATACACAA",16,84.98,10.64,-0.2,0.04,2.95,1.06,0,">1 nonsynonymous","S45T G83C",2
"lib2","SARS-CoV-2","GATTACGTAAAAAGTA",4,10.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61E G116S C150G G152S V182Q",5
"lib2","SARS-CoV-2","GATTACGTAACATCCA",1,49.1,8.83,-2.01,0.1,2.43,1.06,0,">1 nonsynonymous","N58K Q176L",2
"lib2","SARS-CoV-2","GATTACTAAGTACCTA",9,227.42,8.95,-1.89,0.04,2.75,1.06,0,">1 nonsynonymous","G74S V115S",2
"lib2","SARS-CoV-2","GATTACTAATATAGTG",7,38.7,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F17W F44C R124Y",3
"lib2","SARS-CoV-2","GATTACTATTGTCAAT",19,315.97,8.8,-2.04,0.1,1.63,1.12,0,">1 nonsynonymous","Q84K D137Q",2
"lib2","SARS-CoV-2","GATTACTCACCAAGAA",1,51.71,10.42,-0.41,0.06,2.89,1.05,0,">1 nonsynonymous","N4L P149L",2
"lib2","SARS-CoV-2","GATTACTCTCTAAATT",2,15.42,10.41,-0.43,0.11,2.72,1.08,0,">1 nonsynonymous","L60M F185V",2
"lib2","SARS-CoV-2","GATTACTGAACCAGTT",5,56.36,6,-4.84,2,3,1.15,0,">1 nonsynonymous","P7I G74F Q84Y",3
"lib2","SARS-CoV-2","GATTACTTGCATTTGT",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L I80S C102G",3
"lib2","SARS-CoV-2","GATTAGAAACATCCTA",5,46.2,8.79,-2.04,0.3,1.54,1.15,0.03,">1 nonsynonymous","V71M A81S F160W",3
"lib2","SARS-CoV-2","GATTAGACCTATATTC",4,21.73,7.2,-3.63,0.52,1.5,1.14,0.05,">1 nonsynonymous","I88Y G101D S113A N120P E141N",5
"lib2","SARS-CoV-2","GATTAGAGACGTCCTA",3,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72S Q144S F160S",3
"lib2","SARS-CoV-2","GATTAGAGAGCTGAAT",3,25.14,8.13,-2.71,0.11,1.79,1.07,0.01,">1 nonsynonymous","A14I A105N",2
"lib2","SARS-CoV-2","GATTAGAGATTAGAAT",4,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55E T63M N107G K114V L183S",5
"lib2","SARS-CoV-2","GATTAGAGCAAGGGAA",6,14.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2W F99I A105S",3
"lib2","SARS-CoV-2","GATTAGAGTTTAAGGA",3,93.69,11,0.17,0.05,3,1,0,">1 nonsynonymous","K128V Q168W",2
"lib2","SARS-CoV-2","GATTAGCCCGCTGAAC",7,64.21,9.32,-1.51,0.17,1.5,1,0.01,">1 nonsynonymous","K26R Y35R Q84F L122N",4
"lib2","SARS-CoV-2","GATTAGCTTACTACAG",3,11.42,6.34,-4.5,0.86,1.5,1.09,0.04,">1 nonsynonymous","V77T P96L D137S",3
"lib2","SARS-CoV-2","GATTAGGAACAATGAA",9,97.96,10.9,0.06,0.05,2.91,1.09,0,"1 nonsynonymous","A192T",1
"lib2","SARS-CoV-2","GATTAGGAACCTAAGT",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8H K94A",2
"lib2","SARS-CoV-2","GATTAGGAATTCATCG",3,29.16,6,-4.84,1.51,1.81,1.19,0.02,">1 nonsynonymous","A67I G86C D90R A105L L122M",5
"lib2","SARS-CoV-2","GATTAGGACTACCGAT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","G51* D59V I88T Y159A",4
"lib2","SARS-CoV-2","GATTAGGCATTATATT",9,136.14,10.75,-0.09,0.03,2.92,1.09,0,">1 nonsynonymous","V37L N151C",2
"lib2","SARS-CoV-2","GATTAGGCTCCCGTGA",1,8.89,6,-4.84,2,3,1.2,0.03,">1 nonsynonymous","S69K L95F W106C",3
"lib2","SARS-CoV-2","GATTAGGGTACCTCTC",3,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V P82Q Y143W Q176C",4
"lib2","SARS-CoV-2","GATTAGGTCAACTGCC",2,17.9,9.59,-1.24,0.22,2.67,1.18,0.03,">1 nonsynonymous","D90Q F126Q",2
"lib2","SARS-CoV-2","GATTAGGTCTCCCGCG",6,90.42,10.92,0.09,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTAGGTTATCCTAC",3,45.01,9.12,-1.71,0.11,2.75,1.06,0.01,">1 nonsynonymous","T55I A105S K114P V173I",4
"lib2","SARS-CoV-2","GATTAGTATATCCCCA",4,12.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1Q G9L F47M P96W A105D Y178R",6
"lib2","SARS-CoV-2","GATTAGTCGGCCTGAT",5,45.51,9.86,-0.97,0.13,2.29,1.04,0.01,">1 nonsynonymous","D97L V115Q N130S S139V",4
"lib2","SARS-CoV-2","GATTAGTTTTAGTACC",4,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T D90W",2
"lib2","SARS-CoV-2","GATTATAAATAAGTGG",3,15.24,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T63L D98V D112N N130Y Q144T",5
"lib2","SARS-CoV-2","GATTATAACACACCCA",2,22.92,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A33R S45M L60V G117H",4
"lib2","SARS-CoV-2","GATTATAACGGGGTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","F44* W106L P169H",3
"lib2","SARS-CoV-2","GATTATAATTCACCGA",1,20.76,9.83,-1,0.1,2.23,1,0.01,">1 nonsynonymous","D34I K132M",2
"lib2","SARS-CoV-2","GATTATACCTAATTTT",2,31.65,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","L95D N151K",2
"lib2","SARS-CoV-2","GATTATAGATACAGGA",3,16.45,9.79,-1.04,0.17,1.87,1.11,0.01,">1 nonsynonymous","S53F N58K A81R K132G",4
"lib2","SARS-CoV-2","GATTATAGTTCAAATT",4,1.48,NA,NA,NA,NA,NA,NA,"stop","N4M Y35* C49N Q84A T201D",5
"lib2","SARS-CoV-2","GATTATATTAGAGATT",12,113.61,8.78,-2.06,0.24,1.5,1.12,0.02,">1 nonsynonymous","P7G D90K N107K",3
"lib2","SARS-CoV-2","GATTATCATAACGTAT",4,1.39,NA,NA,NA,NA,NA,NA,"stop","C49* C61S N107L R136H",4
"lib2","SARS-CoV-2","GATTATCATAATATAG",9,123.49,10.76,-0.07,0.03,2.98,1.02,0,"1 nonsynonymous","Q144R",1
"lib2","SARS-CoV-2","GATTATCCAAAAAATA",7,108.91,10.77,-0.07,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTATCCCACTACGA",3,22.9,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F99T S139F K199S",3
"lib2","SARS-CoV-2","GATTATCCCGAACTGT",2,5.21,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","W23L T55S K87N G117Y K199S",5
"lib2","SARS-CoV-2","GATTATCTAATATACG",7,127.1,8.53,-2.31,0.09,2.34,1.1,0,">1 nonsynonymous","G117F N151I",2
"lib2","SARS-CoV-2","GATTATCTAGACTACA",8,31.02,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","A18K I28R Y39F V52D D97P",5
"lib2","SARS-CoV-2","GATTATCTGAAATTTT",8,131.29,10.41,-0.43,0.05,2.89,1.06,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","GATTATCTGTTCAATG",3,59.9,10.74,-0.1,0.07,2.93,1.05,0,">1 nonsynonymous","V103I T201Y",2
"lib2","SARS-CoV-2","GATTATGCAATGGGAA",3,27.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44E K56R P96F V103G S129A I138R Y143S",7
"lib2","SARS-CoV-2","GATTATGCCTAAAGAG",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L S36C W106P G146F V180G",5
"lib2","SARS-CoV-2","GATTATGCCTTATGGA",13,246.11,10.68,-0.16,0.02,2.91,1.07,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","GATTATGCGGCCAAAC",6,45.9,9.94,-0.9,0.08,2.38,1,0,">1 nonsynonymous","R27E T100V S108C S129I S200I",5
"lib2","SARS-CoV-2","GATTATGCTATACATA",5,0.26,NA,NA,NA,NA,NA,NA,"stop","R16F N64V F134Y E135*",4
"lib2","SARS-CoV-2","GATTATGCTGAAAGAG",8,29.99,6.08,-4.76,1.36,1.5,1.21,0.03,">1 nonsynonymous","C49F R136S T201P",3
"lib2","SARS-CoV-2","GATTATGGCGAGACAC",3,54.49,10.75,-0.08,0.05,2.95,1.06,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","GATTATGGTACTATGA",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I G83N F99R I104Y S129A G146E",6
"lib2","SARS-CoV-2","GATTATGTCACATTGA",12,147.01,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y35L P82Q V115E R127P F167V V180T",6
"lib2","SARS-CoV-2","GATTATGTGTCGAAAA",2,6.88,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","V77T N92S S113L R136Y T201N",5
"lib2","SARS-CoV-2","GATTATTAATATCTAA",8,42.14,6.71,-4.13,0.43,1.5,1.08,0.03,">1 nonsynonymous","Y35I P82E D90S",3
"lib2","SARS-CoV-2","GATTATTCACCCAAGG",1,6.01,6.63,-4.2,0.66,3,1,0.02,">1 nonsynonymous","S45V A81T K114R R124H E135G",5
"lib2","SARS-CoV-2","GATTATTCCGGTCGAG",17,118.81,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F12N D59C Y91E G146L Y159G",5
"lib2","SARS-CoV-2","GATTATTCTTCTCAGA",5,12.53,7.8,-3.03,0.33,1.62,1.09,0.04,">1 nonsynonymous","L131V T170C V173P",3
"lib2","SARS-CoV-2","GATTATTGGTAATGAT",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D L111Q",2
"lib2","SARS-CoV-2","GATTCAAAAATTGTCA",9,200.46,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A14W C150I C158N Y178M K198T",5
"lib2","SARS-CoV-2","GATTCAAAAGTCCACA",6,156.03,8.46,-2.37,0.14,2.48,1.1,0.01,">1 nonsynonymous","R16N Y91K Y119D K132H",4
"lib2","SARS-CoV-2","GATTCAAAAGTTGTCG",10,213.76,9.82,-1.02,0.03,2.93,1.08,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","GATTCAAAGCGCCACG",8,2.34,NA,NA,NA,NA,NA,NA,"stop","V77* L95R",2
"lib2","SARS-CoV-2","GATTCAAATAAAATAA",6,45.88,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C6S K26Q T55L C61S N92L S147W",6
"lib2","SARS-CoV-2","GATTCAAATCACAATA",1,51.84,10.51,-0.32,0.04,2.9,1.11,0,">1 nonsynonymous","S43R K87P",2
"lib2","SARS-CoV-2","GATTCAACCCCATGAA",3,56.91,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A22E F62S Y91T L111N",4
"lib2","SARS-CoV-2","GATTCAACGAACCGCA",12,269.03,10.82,-0.02,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTCAACTCTGAAAT",1,18.26,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S53L G83I Q176V",3
"lib2","SARS-CoV-2","GATTCAAGATAATCGA",2,14.65,6,-4.84,2,3,1.08,0,">1 nonsynonymous","P7F S113L Y119L L183C",4
"lib2","SARS-CoV-2","GATTCAAGGATTTGCT",2,33.11,9.53,-1.31,0.1,1.85,1.07,0,">1 nonsynonymous","E10L N40K L57R",3
"lib2","SARS-CoV-2","GATTCAAGTGATGAAA",6,158.57,10.4,-0.43,0.03,2.88,1.1,0,"1 nonsynonymous","S45M",1
"lib2","SARS-CoV-2","GATTCAAGTTACAAAA",10,11.43,NA,NA,NA,NA,NA,NA,"stop","L57S Q84V W106* C150Y",4
"lib2","SARS-CoV-2","GATTCAATGAAGATTG",13,63.93,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S45T C61S G74M N92T D98F",5
"lib2","SARS-CoV-2","GATTCACAAGATAAAA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","V32R C61Y D68I K128C G146* N151I N157I",7
"lib2","SARS-CoV-2","GATTCACATTCACCTA",18,74.03,6.73,-4.1,0.59,1.5,1.27,0.05,">1 nonsynonymous","A14Q N64F G86T Y121F",4
"lib2","SARS-CoV-2","GATTCACCAAAAAAAG",6,79.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I28Q V37G D59Q S69R",4
"lib2","SARS-CoV-2","GATTCACGACCAAAAA",2,37.67,9.83,-1.01,0.12,2.3,1.07,0.01,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","GATTCACTACATCTCC",1,19.42,10.85,0.02,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTCACTTTAAGAAC",8,119.63,10.64,-0.2,0.03,2.89,1.1,0,">1 nonsynonymous","K128Y F134W",2
"lib2","SARS-CoV-2","GATTCAGACACAAACA",1,40.93,10.84,0,0.09,2.91,1.1,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","GATTCAGCAACAAAGG",4,74.72,9.17,-1.67,0.04,2.95,1.09,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","GATTCAGCGGCCACCG",6,48.99,10.76,-0.08,0.04,2.98,1.01,0,">1 nonsynonymous","Y39I T63R V173Y",3
"lib2","SARS-CoV-2","GATTCAGGTAAACCTC",24,404.31,10.03,-0.81,0.03,2.94,1.05,0,">1 nonsynonymous","T85V Y175H",2
"lib2","SARS-CoV-2","GATTCAGGTATGCAGA",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L N107Y F156P",3
"lib2","SARS-CoV-2","GATTCATAACAGCAAC",5,1.85,NA,NA,NA,NA,NA,NA,"stop","P7D F44W S113* T140C E154Y P197T",6
"lib2","SARS-CoV-2","GATTCATAGCAATCTG",5,108.16,10.82,-0.02,0.04,2.96,1.06,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GATTCATCAAAATCGA",2,0.65,NA,NA,NA,NA,NA,NA,"stop","R25* Y123S S129A",3
"lib2","SARS-CoV-2","GATTCATGAAATAGCC",6,52.91,NA,NA,NA,NA,NA,NA,"stop","R73* D90L",2
"lib2","SARS-CoV-2","GATTCATTGGATCTAT",7,41.96,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L95K T201M",2
"lib2","SARS-CoV-2","GATTCCAAGACCCATG",7,79.6,10.8,-0.04,0.03,2.96,1.05,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","GATTCCAAGGGATCGC",3,12.38,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","C49R N92V F99T",3
"lib2","SARS-CoV-2","GATTCCACCACATAAA",6,103.99,10.73,-0.1,0.03,2.93,1.06,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","GATTCCCAACACAATA",2,23.99,10.71,-0.13,0.06,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GATTCCCACATTGTAA",2,34.29,8.31,-2.52,0.24,1.65,1.16,0.01,">1 nonsynonymous","D34Q N118L",2
"lib2","SARS-CoV-2","GATTCCGCACCAGGTT",2,25.93,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G86V R136Q",2
"lib2","SARS-CoV-2","GATTCCGCAGACACGG",3,20.28,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A14S Y93S",2
"lib2","SARS-CoV-2","GATTCCGGTAATGGAT",3,75.08,10.48,-0.36,0.06,2.94,1.05,0,">1 nonsynonymous","N1P S41Q G83S",3
"lib2","SARS-CoV-2","GATTCCTAAATTAAGT",3,47.6,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S43M K48L K56L C158S G174V",5
"lib2","SARS-CoV-2","GATTCCTAGTTAAGTG",5,48.65,10.7,-0.14,0.06,2.9,1.13,0,"1 nonsynonymous","L188F",1
"lib2","SARS-CoV-2","GATTCCTGGAATATAA",7,18.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W23L D34N K56L Y121P",4
"lib2","SARS-CoV-2","GATTCGACTGTACGTT",2,34.23,10.81,-0.03,0.07,2.89,1.07,0,">1 nonsynonymous","V37R S43C",2
"lib2","SARS-CoV-2","GATTCGAGAGATCTGC",1,17.6,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","R27C T63C D75N S139P",4
"lib2","SARS-CoV-2","GATTCGATAGTTGAAG",1,40.14,10.73,-0.1,0.04,2.98,1.03,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","GATTCGCACCCTGCCG",5,0.88,NA,NA,NA,NA,NA,NA,"stop","I2Y S147T G196*",3
"lib2","SARS-CoV-2","GATTCGCATTCGTTTG",2,41.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2R C158I Q168G T201L",4
"lib2","SARS-CoV-2","GATTCGGAGTCCATAC",1,32.48,10.42,-0.41,0.05,3,1,0,">1 nonsynonymous","R16V A22G V65M",3
"lib2","SARS-CoV-2","GATTCGGGGTTCACAA",1,35,10.65,-0.18,0.04,2.96,1.06,0,">1 nonsynonymous","V37G D98G",2
"lib2","SARS-CoV-2","GATTCGTATTGCCTTG",7,92.81,10.01,-0.82,0.1,2.42,1.02,0,">1 nonsynonymous","E135W P149K",2
"lib2","SARS-CoV-2","GATTCTAATAAAAGTT",6,144.62,10.22,-0.61,0.05,2.75,1.07,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","GATTCTACCCAAAGAG",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q W106L H189L",3
"lib2","SARS-CoV-2","GATTCTAGAATTTATT",12,140.59,10.79,-0.04,0.04,2.97,1.04,0,"1 nonsynonymous","R73K",1
"lib2","SARS-CoV-2","GATTCTAGCTTACAAA",2,52.18,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G152Y Y175P K198G",3
"lib2","SARS-CoV-2","GATTCTATCTAGCATG",2,0,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","GATTCTATGCGGCTAT",3,40.96,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","R16T N64A D112V Q144L",4
"lib2","SARS-CoV-2","GATTCTCATACGATTG",5,2.2,NA,NA,NA,NA,NA,NA,"stop","Q84* P96M G196V",3
"lib2","SARS-CoV-2","GATTCTCCAAAAAACG",4,15.27,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F12N Y21N D90Y R127E V173S",5
"lib2","SARS-CoV-2","GATTCTCGAAATTATC",5,40.54,8.94,-1.9,0.1,1.71,1.07,0.01,">1 nonsynonymous","C6G R25S",2
"lib2","SARS-CoV-2","GATTCTCGCAGTAAGT",2,26.38,9.76,-1.08,0.08,2.69,1,0,">1 nonsynonymous","F8C P197L",2
"lib2","SARS-CoV-2","GATTCTCGGGGAAATC",4,46.26,6,-4.84,2,3,1.06,0,">1 nonsynonymous","T15I V52I S113P Q176Y",4
"lib2","SARS-CoV-2","GATTCTCGTCAAAAAA",1,28.95,6,-4.84,2,3,1.2,0,">1 nonsynonymous","A14G F126S S164L",3
"lib2","SARS-CoV-2","GATTCTCTCTGTTCAT",13,105.45,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Q84R D98T D112A N130T Y143V",5
"lib2","SARS-CoV-2","GATTCTGAAGCCGATA",1,17.67,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","D34Y Y93L P169M",3
"lib2","SARS-CoV-2","GATTCTGATGGTAATT",4,33.16,10.64,-0.19,0.05,2.86,1.16,0,">1 nonsynonymous","C61I E141T",2
"lib2","SARS-CoV-2","GATTCTGCTGCGAGAA",7,77.25,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y35R Y143Q F167S",3
"lib2","SARS-CoV-2","GATTCTTCAATGTTAT",2,36.63,10.85,0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTCTTTAATTGGGA",3,56.14,10.77,-0.07,0.07,2.96,1.07,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","GATTGAAAAAATCAAT",3,65.17,8.09,-2.75,0.11,1.57,1.04,0,">1 nonsynonymous","Y39G G86T",2
"lib2","SARS-CoV-2","GATTGAAATTTAATAA",8,0.4,NA,NA,NA,NA,NA,NA,"stop","P54K K87*",2
"lib2","SARS-CoV-2","GATTGAACACGACTAA",2,8.76,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","L57C G74R G101S S200I",4
"lib2","SARS-CoV-2","GATTGAACCGCATGAT",3,11.34,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","V20L S36G W106R D137Y",4
"lib2","SARS-CoV-2","GATTGAACGGTGATTA",2,29.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I N40I Y66S W106M",4
"lib2","SARS-CoV-2","GATTGAACTAGAGTTA",2,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A D90V L95P N107V",4
"lib2","SARS-CoV-2","GATTGAACTCTAAGAT",7,71.51,9.12,-1.72,0.04,2.07,1.02,0,">1 nonsynonymous","S36K Y121S I138C",3
"lib2","SARS-CoV-2","GATTGAATAAATGTTG",21,302.1,10.77,-0.07,0.03,2.94,1.06,0,">1 nonsynonymous","I138S S200I",2
"lib2","SARS-CoV-2","GATTGAATAATAATTA",3,5.05,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34F N107K",2
"lib2","SARS-CoV-2","GATTGAATCAATAATA",2,41.35,10.93,0.1,0.05,2.97,1.07,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","GATTGAATGTACAAAA",5,131.32,10.58,-0.26,0.06,2.81,1.06,0,"1 nonsynonymous","L131M",1
"lib2","SARS-CoV-2","GATTGAATGTACTTGA",6,6.64,NA,NA,NA,NA,NA,NA,"stop","F44K G101* S129T",3
"lib2","SARS-CoV-2","GATTGAATGTGCCCAT",1,77.79,10.71,-0.13,0.02,2.9,1.07,0,">1 nonsynonymous","A42T K128A",2
"lib2","SARS-CoV-2","GATTGACACTCACGGT",2,32.45,10.97,0.14,0.06,3,1.02,0,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","GATTGACAGCGTAGAA",6,75.98,10.86,0.02,0.06,2.94,1.07,0,"1 nonsynonymous","K56E",1
"lib2","SARS-CoV-2","GATTGACATACAACCT",1,38.96,10.66,-0.17,0.05,3,1.04,0,">1 nonsynonymous","K132T F160N",2
"lib2","SARS-CoV-2","GATTGACCTTTCGTAC",4,27.84,10.75,-0.09,0.06,2.98,1.03,0,"1 nonsynonymous","V32A",1
"lib2","SARS-CoV-2","GATTGACGAAAACTGC",2,10.27,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","P82K V103R I142T P149E T170V",5
"lib2","SARS-CoV-2","GATTGACTGATGAATT",11,91.26,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8C A14F E141S N171D",4
"lib2","SARS-CoV-2","GATTGAGCTACAACTG",9,107.25,10.73,-0.11,0.05,2.89,1.07,0,">1 nonsynonymous","L5E S41R",2
"lib2","SARS-CoV-2","GATTGAGGGAAAATGT",4,14.65,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","S19N P54T Q84S F99L N107D N130L S200R",7
"lib2","SARS-CoV-2","GATTGATAATCCATAC",5,39.22,9.57,-1.27,0.09,1.86,1.05,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","GATTGATGATACTCCA",7,1.78,NA,NA,NA,NA,NA,NA,"stop","V32* K114E G146M C195F T201I",5
"lib2","SARS-CoV-2","GATTGCAAAGATCGAG",5,73.18,8.32,-2.52,0.11,2.72,1.03,0.01,">1 nonsynonymous","Y119E Q144Y",2
"lib2","SARS-CoV-2","GATTGCAAATATTTAG",1,84.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2G V65M A81K Y91A Y178G",5
"lib2","SARS-CoV-2","GATTGCAATTACAACA",5,47.91,8.71,-2.13,0.39,1.5,1,0.05,">1 nonsynonymous","W106T G116H F134L",3
"lib2","SARS-CoV-2","GATTGCACATGGGAGT",2,17.02,6,-4.84,2,1.5,1.24,0.03,"1 nonsynonymous","I80A",1
"lib2","SARS-CoV-2","GATTGCACCGATAGTA",7,3.17,NA,NA,NA,NA,NA,NA,"stop","S53F D59C Y91P D97* Y143F",5
"lib2","SARS-CoV-2","GATTGCAGCCTCACAT",7,48.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37L F44Q G86S F99P N107K S184Y",6
"lib2","SARS-CoV-2","GATTGCAGGGTTCTAT",8,20.65,6.83,-4.01,0.46,1.5,1.12,0.03,">1 nonsynonymous","T15D N64I D137L P169A G174R S184N",6
"lib2","SARS-CoV-2","GATTGCATAAAAATCG",1,63.61,10.83,0,0.05,2.83,1.15,0,"1 nonsynonymous","V153Q",1
"lib2","SARS-CoV-2","GATTGCCAAATTGGGC",2,26.13,8.54,-2.29,0.42,1.68,1.28,0.07,">1 nonsynonymous","V52C I104S P149T F156T",4
"lib2","SARS-CoV-2","GATTGCCAACCCCGAA",10,86.75,11.16,0.33,0.05,2.95,1.06,0,"1 nonsynonymous","N171T",1
"lib2","SARS-CoV-2","GATTGCCCTACATATA",4,136.91,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C61D T100W L131E",3
"lib2","SARS-CoV-2","GATTGCCTTATATACG",13,12.84,NA,NA,NA,NA,NA,NA,"stop","S29* T100N C158L L183K T201R",5
"lib2","SARS-CoV-2","GATTGCTACTACGTTT",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L Q144L S164V",3
"lib2","SARS-CoV-2","GATTGCTACTATCCTT",5,0.1,NA,NA,NA,NA,NA,NA,"stop","L5W S45* C61W Y123T",4
"lib2","SARS-CoV-2","GATTGCTAGAATACCT",6,70.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D N40L G83M I104C",4
"lib2","SARS-CoV-2","GATTGCTCCTGGACTA",17,2.07,NA,NA,NA,NA,NA,NA,"stop","S45R Y143S T148S V181*",4
"lib2","SARS-CoV-2","GATTGCTTTACGGTAT",2,14.25,9.2,-1.63,0.29,2.12,1.18,0.04,">1 nonsynonymous","V11F Y21V D90A I104E R124M R136Q Y143K T170L",8
"lib2","SARS-CoV-2","GATTGGAGAATCTATA",2,18.16,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S53F Y159D",2
"lib2","SARS-CoV-2","GATTGGATACTTGTAG",9,45.22,8.97,-1.86,0.23,1.5,1,0.03,">1 nonsynonymous","G9R G83I V103I N130L",4
"lib2","SARS-CoV-2","GATTGGATATACCTAC",2,13.53,10.85,0.02,0.14,2.91,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GATTGGCAGAAATACT",1,10.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V71K A105T C150V P161G G172F",5
"lib2","SARS-CoV-2","GATTGGCCACTAGATG",2,14.48,6.16,-4.67,1.05,1.5,1.26,0.04,">1 nonsynonymous","A81V F99C Y165P",3
"lib2","SARS-CoV-2","GATTGGCCATCCTGAA",4,94.31,10.89,0.05,0.07,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTGGCTGTGGGCTA",2,35.4,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","L5M N64S D98S R124K P133R P149F",6
"lib2","SARS-CoV-2","GATTGGGACCACTTAA",1,6.87,7.79,-3.04,0.57,1.5,1,0.01,">1 nonsynonymous","R127P F160K",2
"lib2","SARS-CoV-2","GATTGGGTGTTATAAT",3,40.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A22C N30T F99T I104R",4
"lib2","SARS-CoV-2","GATTGGTATGTCACAC",4,0,NA,NA,NA,NA,NA,NA,"stop","G9Q S36* C61N",3
"lib2","SARS-CoV-2","GATTGGTCCCACGGAT",7,70.22,9.78,-1.05,0.08,2.17,1.08,0,">1 nonsynonymous","L5P T15K T63W N151I",4
"lib2","SARS-CoV-2","GATTGGTGGACACGTA",6,104.16,10.75,-0.08,0.03,3,1.02,0,"1 nonsynonymous","C61P",1
"lib2","SARS-CoV-2","GATTGTAAGGTTCTGC",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L Y21R D59F",3
"lib2","SARS-CoV-2","GATTGTAATAAATGTG",9,49.27,6,-4.84,1.96,1.5,1.17,0.03,">1 nonsynonymous","T46K D137T V173H P197V",4
"lib2","SARS-CoV-2","GATTGTAATAGTGTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","L57S N107M G116P F156*",4
"lib2","SARS-CoV-2","GATTGTAATTCGTGTC",7,25.64,9.48,-1.35,0.11,2.09,1,0,">1 nonsynonymous","N58L F167Y",2
"lib2","SARS-CoV-2","GATTGTCAAGAATCAA",1,57.94,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44D I72N F156P",3
"lib2","SARS-CoV-2","GATTGTCCATCAAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* S45I V103* G146K P161M",5
"lib2","SARS-CoV-2","GATTGTCCTTTCTGGT",7,1382.52,10.23,-0.61,0.03,2.8,1,0,">1 nonsynonymous","T63F Q84R",2
"lib2","SARS-CoV-2","GATTGTCTAGAATAAT",15,3.87,NA,NA,NA,NA,NA,NA,"stop","L5* D90H W106L",3
"lib2","SARS-CoV-2","GATTGTCTAGTAATTA",2,0.71,NA,NA,NA,NA,NA,NA,"stop","F12* D98* T170K",3
"lib2","SARS-CoV-2","GATTGTGCACACGAGA",1,45.07,6,-4.84,2,3,1.13,0,">1 nonsynonymous","D112K T140K Q163S Y175N P191N",5
"lib2","SARS-CoV-2","GATTGTGCATACAAAT",2,28.83,9.04,-1.8,0.11,2.93,1.11,0,">1 nonsynonymous","K87V A145K",2
"lib2","SARS-CoV-2","GATTGTTAAATATCCT",2,16.24,9.68,-1.15,0.13,1.99,1.07,0.01,"1 nonsynonymous","F8E",1
"lib2","SARS-CoV-2","GATTGTTAACACGTGT",6,71.34,8.4,-2.44,0.34,1.5,1,0.05,">1 nonsynonymous","L5K Y91Q K128A S139I Q168H",5
"lib2","SARS-CoV-2","GATTGTTAACTATACA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S T46S V181N",3
"lib2","SARS-CoV-2","GATTGTTCACGAATCT",13,215.95,10.11,-0.73,0.03,2.92,1.04,0,">1 nonsynonymous","N58L F156A",2
"lib2","SARS-CoV-2","GATTGTTCAGGCGAAA",3,51.21,10.86,0.03,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTGTTCTGTGTAAA",8,90.38,8.25,-2.59,0.09,2.82,1.11,0,">1 nonsynonymous","G117H F156T",2
"lib2","SARS-CoV-2","GATTGTTTAACACTTT",1,5.21,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","A42S D112K K128Q R136M",4
"lib2","SARS-CoV-2","GATTGTTTCAATAGAT",2,53.63,10.71,-0.13,0.03,2.99,1.02,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","GATTGTTTCTAACCAA",2,10.83,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V52F I88M K128R G166C G174I T201V",6
"lib2","SARS-CoV-2","GATTTAAAAACACTTA",1,24.86,9.7,-1.13,0.1,2.46,1,0,">1 nonsynonymous","A33K N151Y E186S",3
"lib2","SARS-CoV-2","GATTTAAAGACCATAT",4,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V L162F E186L T201Q",4
"lib2","SARS-CoV-2","GATTTAAAGCGAAATG",3,11.37,6.69,-4.14,0.58,1.5,1.14,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","GATTTAAATAAATGTC",4,17.5,7.87,-2.96,0.39,1.5,1,0.06,"1 nonsynonymous","V20M",1
"lib2","SARS-CoV-2","GATTTAAATACTTTAT",6,44.17,10.02,-0.82,0.07,3,1.03,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","GATTTAACAATAATCG",4,9.17,6.29,-4.55,1.13,1.5,1.17,0.05,"1 nonsynonymous","V181S",1
"lib2","SARS-CoV-2","GATTTAACAGCATAGT",1,78.61,10.26,-0.58,0.07,2.82,1,0,">1 nonsynonymous","A105C K198R",2
"lib2","SARS-CoV-2","GATTTAAGAAAGCATT",3,23.26,10.57,-0.26,0.07,2.97,1.03,0,">1 nonsynonymous","N110L P169K",2
"lib2","SARS-CoV-2","GATTTAAGACCTGTGC",5,61.87,10.85,0.01,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTAAGCCTGACAT",6,260.68,9.21,-1.63,0.06,1.8,1.1,0,">1 nonsynonymous","T3K S36A S43G N58V Y178A",5
"lib2","SARS-CoV-2","GATTTACACTAAAGGG",4,81.39,7.51,-3.33,0.3,1.5,1.14,0.03,">1 nonsynonymous","K87I F99S",2
"lib2","SARS-CoV-2","GATTTACATCCCCTAT",7,96.43,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5Q Y66A A89K",3
"lib2","SARS-CoV-2","GATTTACATTGACTTC",12,69.64,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F62H V103R S164V",3
"lib2","SARS-CoV-2","GATTTACCAGAACCTT",8,263.26,10.67,-0.16,0.02,2.99,1.02,0,">1 nonsynonymous","K87R E186D",2
"lib2","SARS-CoV-2","GATTTACCGCCAATCC",2,25.04,10.8,-0.03,0.06,2.99,1.01,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","GATTTACGAGAGCAGG",1,20.13,10.07,-0.76,0.05,2.98,1,0,">1 nonsynonymous","T85P L131V",2
"lib2","SARS-CoV-2","GATTTACTCCGAGGTA",5,12.83,10.03,-0.81,0.24,2.41,1.1,0.02,">1 nonsynonymous","C61Y K87R D98L",3
"lib2","SARS-CoV-2","GATTTACTGCCGCGGT",8,114.7,10.05,-0.79,0.07,2.26,1.08,0,">1 nonsynonymous","T3A K26T F185T",3
"lib2","SARS-CoV-2","GATTTAGAAGCATGAA",6,8.22,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D34L F62A D90Y P161G",4
"lib2","SARS-CoV-2","GATTTAGACCAAATTC",10,91.52,10.8,-0.03,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTAGAGCATTAAT",2,17.99,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T63K F99S E154K C158H",4
"lib2","SARS-CoV-2","GATTTAGATAATGGTC",3,0.02,NA,NA,NA,NA,NA,NA,"stop","Y93* Y119H E135I",3
"lib2","SARS-CoV-2","GATTTAGCAAATAAGT",16,209.32,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","E10K T63V K87N E154L L162D T170H",6
"lib2","SARS-CoV-2","GATTTAGGGACACATC",3,80.26,10.83,-0.01,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTAGTAAAATAAG",9,118.02,9.79,-1.05,0.07,2.69,1.04,0,">1 nonsynonymous","I2N R27T K56R D90C P169R",5
"lib2","SARS-CoV-2","GATTTAGTACTCATAT",2,53.56,7.82,-3.01,0.21,1.5,1.03,0.02,">1 nonsynonymous","K114C P133S T140G Q168V",4
"lib2","SARS-CoV-2","GATTTATATGATTTCC",16,227.64,10.69,-0.14,0.04,2.98,1.05,0,">1 nonsynonymous","T85E S200G",2
"lib2","SARS-CoV-2","GATTTATCAAGCAACA",4,25.26,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","T15N N40V C61A Q79W A145C",5
"lib2","SARS-CoV-2","GATTTATCCATTTACT",11,259.01,10.12,-0.72,0.04,2.65,1.03,0,">1 nonsynonymous","E10G P133S",2
"lib2","SARS-CoV-2","GATTTATGCCTGTTAA",11,67.82,7.58,-3.25,0.28,1.5,1.09,0.03,">1 nonsynonymous","K87Y T100G I104S",3
"lib2","SARS-CoV-2","GATTTATGTCTGACCT",12,72.15,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N4A G86F Y121V P197R",4
"lib2","SARS-CoV-2","GATTTATTATCAGACT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","GATTTATTCAATTGTA",1,6.84,10.86,0.02,0.1,2.91,1.1,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","GATTTATTCGATTCAA",17,156.37,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9D S19R T46L Y91D Y143L C150M K199F",7
"lib2","SARS-CoV-2","GATTTATTTAACTACC",8,0.15,NA,NA,NA,NA,NA,NA,"stop","G9L R78* D90M",3
"lib2","SARS-CoV-2","GATTTCAAAAACATAA",3,24.09,7.07,-3.77,0.24,1.5,1.11,0.02,">1 nonsynonymous","S19E Y39S K128E A145G",4
"lib2","SARS-CoV-2","GATTTCAAAGTGTACT",8,48.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V71M L131V G166M G174M",4
"lib2","SARS-CoV-2","GATTTCAATCTTCCCG",7,0.2,NA,NA,NA,NA,NA,NA,"stop","T15* T148D",2
"lib2","SARS-CoV-2","GATTTCAATTAAATTG",5,13.57,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","GATTTCACCAGTACTA",1,93.13,8.11,-2.73,0.11,2.05,1.06,0,">1 nonsynonymous","P149L Q176C",2
"lib2","SARS-CoV-2","GATTTCAGCATTTCTA",2,38.65,6.51,-4.33,0.38,1.5,1.13,0.01,">1 nonsynonymous","S36I F62G I142S",3
"lib2","SARS-CoV-2","GATTTCAGGTACGGAT",13,137.47,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D59H G86F D137L",3
"lib2","SARS-CoV-2","GATTTCATCTAATGCA",1,35.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61T N118G Y165A",3
"lib2","SARS-CoV-2","GATTTCATTCTATCGT",1,27.91,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","Y39E L60V I104G T140K G146L",5
"lib2","SARS-CoV-2","GATTTCCACTAGATAG",7,94.29,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5N Y93K A105Y",3
"lib2","SARS-CoV-2","GATTTCCACTCTCACC",9,57.14,9.9,-0.94,0.09,2.07,1.13,0,">1 nonsynonymous","T15F S41I T46N",3
"lib2","SARS-CoV-2","GATTTCCCAACCATCT",17,167.46,8.31,-2.52,0.13,1.77,1.09,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","GATTTCCCTTGACTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y T100R",2
"lib2","SARS-CoV-2","GATTTCCGACATCATA",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N K48N T85H W106P R179L",5
"lib2","SARS-CoV-2","GATTTCCTTCTAACGC",6,0.73,NA,NA,NA,NA,NA,NA,"stop","N58H N110* G166I",3
"lib2","SARS-CoV-2","GATTTCGAAAAAATGA",7,106.21,6,-4.84,2,3,1.16,0,">1 nonsynonymous","P7Y A18F G51N V77K V103L K114S N120Q Y143V V173Y",9
"lib2","SARS-CoV-2","GATTTCGAAACACCTT",12,302.59,10.27,-0.57,0.03,2.83,1.02,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","GATTTCGGGTCTCTAA",17,139.09,9.01,-1.83,0.11,1.5,1.06,0,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","GATTTCGGTAAGTCGC",6,0.32,NA,NA,NA,NA,NA,NA,"stop","G9S Y35S S45Q N171*",4
"lib2","SARS-CoV-2","GATTTCGTTTGTCTAA",6,64.5,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D97F N107G G146E V173S T201Y",5
"lib2","SARS-CoV-2","GATTTCTGGTGAAGGA",2,19.95,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","N1Y A42E D112S Y119T",4
"lib2","SARS-CoV-2","GATTTGAAAACCCTCG",7,54,9.21,-1.63,0.26,1.5,1,0.03,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","GATTTGAAGATAAAAA",2,21.77,7.06,-3.78,0.36,1.5,1.14,0.02,">1 nonsynonymous","K48Y N107T T201C",3
"lib2","SARS-CoV-2","GATTTGACACATCGAA",1,37.71,10.81,-0.03,0.04,2.92,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GATTTGATAACTAATG",14,7.52,NA,NA,NA,NA,NA,NA,"stop","G117* E141Y",2
"lib2","SARS-CoV-2","GATTTGATATTGACAA",2,27.72,10.75,-0.09,0.07,2.93,1.05,0,">1 nonsynonymous","N30E S129N",2
"lib2","SARS-CoV-2","GATTTGCAAAGTCGTT",4,15.21,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3K G9P C49N V182L",4
"lib2","SARS-CoV-2","GATTTGCGAGCTGAGT",2,78.94,10.89,0.05,0.05,2.95,1.05,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","GATTTGCGATAGGGCC",1,35.69,10.26,-0.58,0.03,2.91,1.02,0,">1 nonsynonymous","T55S D90E E141L",3
"lib2","SARS-CoV-2","GATTTGCGGCATCCCA",17,123.23,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","S36W V103F",2
"lib2","SARS-CoV-2","GATTTGGATTGCATCA",3,16.11,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","L60T I88Q R124F S139I",4
"lib2","SARS-CoV-2","GATTTGGCAGGCATAT",3,8.42,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15P C61G S69R K94T T100P V181P",6
"lib2","SARS-CoV-2","GATTTGGGACAAAAAC",3,78.73,9.98,-0.85,0.06,2.64,1.07,0,">1 nonsynonymous","A89T I142Y",2
"lib2","SARS-CoV-2","GATTTGTAGCTGAATT",9,140.96,10.49,-0.35,0.03,2.9,1.06,0,"1 nonsynonymous","A22L",1
"lib2","SARS-CoV-2","GATTTGTATCAACAAT",2,8.14,8.08,-2.76,0.31,1.72,1.12,0.02,">1 nonsynonymous","D90Y N120L N130A E154F E186N",5
"lib2","SARS-CoV-2","GATTTGTATCCAAATC",10,61.24,9.2,-1.64,0.05,2.47,1.06,0,">1 nonsynonymous","Y35L P161V",2
"lib2","SARS-CoV-2","GATTTGTCCAACACCA",3,22.39,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F99D N109I C150G",3
"lib2","SARS-CoV-2","GATTTGTCTATTGCCG",5,95.28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G51K N120S T148E N157A V182N T201K",6
"lib2","SARS-CoV-2","GATTTGTTCAAGCTAC",6,0.12,NA,NA,NA,NA,NA,NA,"stop","N24I N64T D90T V173S S200*",5
"lib2","SARS-CoV-2","GATTTTAAAAACCACG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K56P L95P V180F V182S",5
"lib2","SARS-CoV-2","GATTTTAAAAGCTGCT",1,14.34,6,-4.84,0.84,2.71,1.01,0,">1 nonsynonymous","S45I S69V P96N",3
"lib2","SARS-CoV-2","GATTTTAAACGAAAGT",1,33.17,10.85,0.01,0.06,2.9,1.11,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","GATTTTAAATTATAAT",1,0.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99H D137P G172L",3
"lib2","SARS-CoV-2","GATTTTAAGACGACAA",10,183.24,8.22,-2.61,0.18,1.5,1.06,0.01,">1 nonsynonymous","F99L N107K",2
"lib2","SARS-CoV-2","GATTTTACCTAAAGTG",9,253.69,10.84,0.01,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTTATATCATGAT",1,22.55,9.55,-1.29,0.1,2.07,1.04,0,"1 nonsynonymous","Q84P",1
"lib2","SARS-CoV-2","GATTTTATGCTCTACC",3,44.62,7.96,-2.88,0.18,1.5,1.06,0.01,">1 nonsynonymous","V115Q Y165P",2
"lib2","SARS-CoV-2","GATTTTATTGCAAGAC",3,13.99,6,-4.84,2,3,1.24,0,">1 nonsynonymous","D59R A105P",2
"lib2","SARS-CoV-2","GATTTTCAAGCTTAAG",11,41.22,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","G86R T100L R136M",3
"lib2","SARS-CoV-2","GATTTTCACAATAGTA",2,28.1,10.85,0.01,0.04,3,1,0,">1 nonsynonymous","G83L K114D L122K",3
"lib2","SARS-CoV-2","GATTTTCCATTTTGAC",1,58.68,10.4,-0.44,0.06,2.87,1.01,0,">1 nonsynonymous","T15H V115W",2
"lib2","SARS-CoV-2","GATTTTCCGAAATATG",15,89.53,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A18T G51V P161S",3
"lib2","SARS-CoV-2","GATTTTCCGGAAATAG",1,7.82,8.55,-2.28,0.37,1.68,1.04,0.03,">1 nonsynonymous","E10T T55F N157F",3
"lib2","SARS-CoV-2","GATTTTCGCTGAGTAA",7,31.43,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F62Q I104P K114N I138Y",4
"lib2","SARS-CoV-2","GATTTTCTATGCAAGG",10,6.78,NA,NA,NA,NA,NA,NA,"stop","P7D K56* R136E",3
"lib2","SARS-CoV-2","GATTTTCTTGACTATC",11,153.93,10.76,-0.08,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTTGAACGAGCAA",4,89,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37L D59C D97H R127K C150N Q176L",6
"lib2","SARS-CoV-2","GATTTTGATCGTATTC",4,69.47,10.76,-0.07,0.04,2.95,1.07,0,">1 nonsynonymous","K56V T201V",2
"lib2","SARS-CoV-2","GATTTTGCTACATAGA",2,36.25,10.84,0,0.08,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GATTTTGTTCGGTTAC",5,2.35,NA,NA,NA,NA,NA,NA,"stop","T3E N92* D97F R127F S139N T201N",6
"lib2","SARS-CoV-2","GATTTTTATTAACACA",7,0.54,NA,NA,NA,NA,NA,NA,"stop","K56G F167K G174* S200N",4
"lib2","SARS-CoV-2","GATTTTTTCTTGTAAA",7,142.77,8.46,-2.38,0.11,2.58,1.02,0,">1 nonsynonymous","V37G K48H I142V T148S N157A",5
"lib2","SARS-CoV-2","GCAAAAAAAAAGTATA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","GCAAAAAAAACTTGGC",2,19.06,10.38,-0.46,0.09,2.8,1,0.01,">1 nonsynonymous","P96E Q163A",2
"lib2","SARS-CoV-2","GCAAAAAAACTAAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9R S69R D97* S129R L162F",5
"lib2","SARS-CoV-2","GCAAAAAACACATATA",9,131.63,10.63,-0.2,0.04,2.88,1.1,0,">1 nonsynonymous","N40S A190N",2
"lib2","SARS-CoV-2","GCAAAAAACACCTCAT",2,38.85,9.46,-1.37,0.09,2.62,1.02,0,">1 nonsynonymous","D97S Y121S",2
"lib2","SARS-CoV-2","GCAAAAAACCGCCACG",9,52.44,6,-4.84,1.36,3,1.13,0,">1 nonsynonymous","N13F V52L N110L Y165G",4
"lib2","SARS-CoV-2","GCAAAAAACTGGTACG",4,31.07,9.08,-1.75,0.19,1.5,1,0.02,">1 nonsynonymous","K94P S164P T201E",3
"lib2","SARS-CoV-2","GCAAAAAAGAGCACTG",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72S T85Y V103N Y119L",4
"lib2","SARS-CoV-2","GCAAAAAAGAGTGAAC",2,18.7,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S19P C61T P82L K114E G152Y",5
"lib2","SARS-CoV-2","GCAAAAAAGGCGAACC",2,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23F A42T W106R N120M",4
"lib2","SARS-CoV-2","GCAAAAAATGAACAGA",5,70.11,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","A18S N58F F70K",3
"lib2","SARS-CoV-2","GCAAAAACAAAATTGC",1,10.21,9.97,-0.87,0.13,2.64,1,0.01,">1 nonsynonymous","Y35R L57G",2
"lib2","SARS-CoV-2","GCAAAAACAAATAGTT",3,16.92,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","E10S E76N F134S C158G",4
"lib2","SARS-CoV-2","GCAAAAACAAGAAACG",9,227.75,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","V37N A145C C150S",3
"lib2","SARS-CoV-2","GCAAAAACCTTCTACT",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L Q84E",2
"lib2","SARS-CoV-2","GCAAAAACTCCTGAAA",4,86.38,10.79,-0.05,0.04,2.89,1.13,0,"1 nonsynonymous","Q84G",1
"lib2","SARS-CoV-2","GCAAAAAGCGCGGATT",6,62.48,9.81,-1.02,0.08,2.72,1.07,0,">1 nonsynonymous","S29K I142T P149I",3
"lib2","SARS-CoV-2","GCAAAAAGTCGAACTA",4,53.21,9.68,-1.15,0.16,1.83,1.15,0.01,">1 nonsynonymous","Y50M G83N Y123K",3
"lib2","SARS-CoV-2","GCAAAAAGTTCCCTGG",2,29.19,10.84,0.01,0.04,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAAAATAATTCGAG",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C D59L D90H L122M Y165V K198L",6
"lib2","SARS-CoV-2","GCAAAAATATAAACCA",5,128.64,10.13,-0.71,0.04,2.94,1.02,0,">1 nonsynonymous","G116R P169Q",2
"lib2","SARS-CoV-2","GCAAAAATGCAAAGTA",4,26.36,9.83,-1,0.12,1.96,1.06,0.01,">1 nonsynonymous","T15S A42R L162R",3
"lib2","SARS-CoV-2","GCAAAAATGCGCTAGT",3,27.88,9.41,-1.43,0.13,2.11,1.01,0.01,">1 nonsynonymous","E10W R78P I138P A192E",4
"lib2","SARS-CoV-2","GCAAAAATGCTATTTT",9,135.64,10.7,-0.13,0.02,2.99,1.02,0,">1 nonsynonymous","A22G Y39L K56T V65L L187N",5
"lib2","SARS-CoV-2","GCAAAAATGTATCCCA",6,36.12,10.11,-0.73,0.17,2.21,1.03,0.01,">1 nonsynonymous","A14T S41H T85P",3
"lib2","SARS-CoV-2","GCAAAAATTAATGGGG",21,302.62,10.87,0.03,0.04,2.88,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAAAAATTCCCAACT",9,76.09,8.74,-2.09,0.06,1.86,1.08,0,">1 nonsynonymous","T55N A105N G174R",3
"lib2","SARS-CoV-2","GCAAAAATTCTAACCA",1,21.87,10.7,-0.14,0.04,3,1,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","GCAAAAATTCTTTACC",2,84.91,9.96,-0.87,0.08,1.93,1.01,0,">1 nonsynonymous","E76G D97S",2
"lib2","SARS-CoV-2","GCAAAAATTGTTTCAC",9,132.62,10.25,-0.59,0.03,2.93,1.02,0,"1 nonsynonymous","C31T",1
"lib2","SARS-CoV-2","GCAAAACAAAATCAGG",9,143.36,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L38T W106L F134I T148A P169Q",5
"lib2","SARS-CoV-2","GCAAAACACACAATTT",14,242.25,10.22,-0.62,0.02,2.89,1.02,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","GCAAAACCCGGTAAAA",11,247.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3N N107Y R127V P169A P177D",5
"lib2","SARS-CoV-2","GCAAAACCTAAGAACA",1,48.56,10.48,-0.36,0.05,2.97,1.01,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","GCAAAACCTCACATTG",12,4.61,NA,NA,NA,NA,NA,NA,"stop","P82* W106G D137H G152L",4
"lib2","SARS-CoV-2","GCAAAACGCACACCAG",3,75.39,10.46,-0.38,0.05,2.94,1.08,0,">1 nonsynonymous","K87T K132Y",2
"lib2","SARS-CoV-2","GCAAAACGCGTTTGAG",8,201.36,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N151T P177G",2
"lib2","SARS-CoV-2","GCAAAACGGGCATCAG",7,2.76,NA,NA,NA,NA,NA,NA,"stop","Y50P A89* V180S",3
"lib2","SARS-CoV-2","GCAAAACGTGCGACAA",18,120.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D34K Y50S W106E Y119H",4
"lib2","SARS-CoV-2","GCAAAACTACTTTTAG",7,31.49,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","F99G",1
"lib2","SARS-CoV-2","GCAAAACTCATACAAG",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K S41R",2
"lib2","SARS-CoV-2","GCAAAACTCCTAAACA",3,51.68,10.11,-0.72,0.04,2.9,1.03,0,">1 nonsynonymous","C6Q E154S V173L",3
"lib2","SARS-CoV-2","GCAAAACTCTGGACAC",6,35.04,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S41E T46I T63S D68V E76F W106L",6
"lib2","SARS-CoV-2","GCAAAACTTTCCGACA",15,3.94,NA,NA,NA,NA,NA,NA,"stop","V37* S129L",2
"lib2","SARS-CoV-2","GCAAAAGAAAAGTGAT",6,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152R P177L",2
"lib2","SARS-CoV-2","GCAAAAGAACGTGCTA",4,45.55,6.25,-4.58,0.5,1.5,1.07,0.01,">1 nonsynonymous","N107I E135S",2
"lib2","SARS-CoV-2","GCAAAAGATATGAAAT",5,150.12,9.76,-1.08,0.06,2.34,1.03,0,">1 nonsynonymous","C6M N64C",2
"lib2","SARS-CoV-2","GCAAAAGCCTCAAGTT",10,95.4,9.37,-1.47,0.1,1.66,1.04,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GCAAAAGCTAGATGGC",4,5.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113M G152H L183N",3
"lib2","SARS-CoV-2","GCAAAAGGACAACTAA",8,32.29,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T3M R25D D59Q",3
"lib2","SARS-CoV-2","GCAAAAGGTCATCATA",3,4.71,NA,NA,NA,NA,NA,NA,"stop","S41F T140V Y159* Y165V",4
"lib2","SARS-CoV-2","GCAAAAGGTCTATCGC",11,129.14,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T46Y L122P R179F",3
"lib2","SARS-CoV-2","GCAAAAGGTTTTCCGA",5,20.99,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F126P Y165T P191M",3
"lib2","SARS-CoV-2","GCAAAAGTACACAAGG",4,21.19,7.78,-3.06,0.27,1.5,1.02,0.03,">1 nonsynonymous","L38T W106Q",2
"lib2","SARS-CoV-2","GCAAAATAAGGCTATT",1,76.96,7.43,-3.41,0.21,1.5,1.11,0.01,">1 nonsynonymous","R27A D59I L122Q Q176L",4
"lib2","SARS-CoV-2","GCAAAATAATTATGCG",18,185.1,8.24,-2.6,0.13,2.36,1.08,0.01,">1 nonsynonymous","C61G A105S N118P",3
"lib2","SARS-CoV-2","GCAAAATACAAAAAGG",2,20.07,10.54,-0.3,0.06,2.98,1.02,0,">1 nonsynonymous","G9M T85G",2
"lib2","SARS-CoV-2","GCAAAATATAATACAG",10,86.55,6.07,-4.77,0.84,1.5,1.17,0.02,">1 nonsynonymous","I2P G9H T15S R124N T201S",5
"lib2","SARS-CoV-2","GCAAAATCCAGCCAAA",2,44.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47V V71M D90K",3
"lib2","SARS-CoV-2","GCAAAATCTGTGCACG",1,21.88,10.89,0.06,0.07,3,1.03,0,"1 nonsynonymous","N110S",1
"lib2","SARS-CoV-2","GCAAAATCTTAAAGTA",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45T S53M D59V K132S I142T",5
"lib2","SARS-CoV-2","GCAAAATGCAAAATAG",7,212.05,9.72,-1.12,0.05,1.89,1.07,0,">1 nonsynonymous","Y50M V153L",2
"lib2","SARS-CoV-2","GCAAAATTAAACCTGT",7,82.19,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","L60P N107A K128P R136F F156D",5
"lib2","SARS-CoV-2","GCAAAATTACATAGCA",3,33.77,10.9,0.06,0.06,3,1.02,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","GCAAAATTAGGGTAAA",8,289.29,9.7,-1.14,0.03,2.85,1.03,0,">1 nonsynonymous","N1R P7Q Y143L",3
"lib2","SARS-CoV-2","GCAAAATTAGTCTATT",2,15.54,7.72,-3.12,0.42,1.57,1.24,0.04,">1 nonsynonymous","P7K S41P T85S Y178E",4
"lib2","SARS-CoV-2","GCAAAATTATAACGCT",7,1.93,NA,NA,NA,NA,NA,NA,"stop","C6N C61I T100P N107A V115* R127*",6
"lib2","SARS-CoV-2","GCAAAATTCAAGAATA",6,5.63,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F47R A81I D112M I138A",4
"lib2","SARS-CoV-2","GCAAAATTCCAGATTA",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26A D98F",2
"lib2","SARS-CoV-2","GCAAAATTGGGAAAAG",2,7.89,6.28,-4.55,0.67,1.5,1.17,0.02,">1 nonsynonymous","A81T V115S Y123I",3
"lib2","SARS-CoV-2","GCAAACAAAATATAAT",2,16.21,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F8C N64T N107C V153L",4
"lib2","SARS-CoV-2","GCAAACAACATATGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","S45T D90Y Y123I E154I K198*",5
"lib2","SARS-CoV-2","GCAAACAACTAGATGC",1,1.18,NA,NA,NA,NA,NA,NA,"stop","C6F S36E A105W L122R A145M C158*",6
"lib2","SARS-CoV-2","GCAAACACCACTGAGT",5,20.24,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T15F F167R T201M",3
"lib2","SARS-CoV-2","GCAAACAGAACCTCCA",2,47.34,9.72,-1.12,0.13,1.71,1.15,0.01,">1 nonsynonymous","G9L F62N T100I I138Y",4
"lib2","SARS-CoV-2","GCAAACATGGGACTAA",6,69.97,9.61,-1.23,0.09,2.34,1.07,0,">1 nonsynonymous","Y121F P133H",2
"lib2","SARS-CoV-2","GCAAACATTAACGTAA",2,34.71,8.46,-2.38,0.13,2.83,1.1,0.01,">1 nonsynonymous","L125K N130G",2
"lib2","SARS-CoV-2","GCAAACCAAAATAGTC",2,28.81,10.71,-0.12,0.08,2.82,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAACCAGAAAAGAT",1,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L D75Y V77H",3
"lib2","SARS-CoV-2","GCAAACCAGTATACAG",5,50.2,8.79,-2.04,0.11,2.86,1.09,0.01,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","GCAAACCATACCCCTA",1,22.49,10.67,-0.16,0.08,2.68,1.33,0,">1 nonsynonymous","V32K T148G",2
"lib2","SARS-CoV-2","GCAAACCCAGACATGA",3,40.38,9.01,-1.83,0.13,1.8,1.1,0.01,">1 nonsynonymous","A14L W106S",2
"lib2","SARS-CoV-2","GCAAACCCGAATATCC",1,8.37,10.71,-0.13,0.08,2.79,1.21,0,">1 nonsynonymous","G116R T201L",2
"lib2","SARS-CoV-2","GCAAACCCGCATAAGT",5,145.71,10.81,-0.03,0.04,2.89,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAAACCGAATATATG",5,80.12,7.4,-3.43,0.1,2.22,1.08,0,">1 nonsynonymous","A42E Y119S I142G P197S",4
"lib2","SARS-CoV-2","GCAAACCGCATGCAAA",2,34.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14S D68I A105H I138H G152F",5
"lib2","SARS-CoV-2","GCAAACCGCTCTCCGA",6,2.6,NA,NA,NA,NA,NA,NA,"stop","L5V S45L C61E V115* L125Y",5
"lib2","SARS-CoV-2","GCAAACCTAACTATAA",11,3.79,NA,NA,NA,NA,NA,NA,"stop","N4F A14R F44A K56* Y119N G174T",6
"lib2","SARS-CoV-2","GCAAACCTACTCGAAT",2,38.82,10.63,-0.21,0.1,2.95,1.09,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","GCAAACCTCTAGACCA",1,11.35,10.85,0.02,0.07,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAACCTTTCCATTG",1,6.43,10.06,-0.78,0.07,2.96,1.03,0,"1 nonsynonymous","T170M",1
"lib2","SARS-CoV-2","GCAAACGAACATTCAC",3,13.88,8.66,-2.17,0.41,1.69,1.17,0.06,">1 nonsynonymous","W106T Y143E",2
"lib2","SARS-CoV-2","GCAAACGACGAGTATA",2,3.22,NA,NA,NA,NA,NA,NA,"stop","K114* Y143F S164A",3
"lib2","SARS-CoV-2","GCAAACGTCCGATGTA",7,102.74,9.77,-1.06,0.06,2.63,1.04,0,">1 nonsynonymous","I72T N171S",2
"lib2","SARS-CoV-2","GCAAACGTTATCCGAC",15,394.91,10.82,-0.02,0.03,2.94,1.07,0,">1 nonsynonymous","S43W A192M P197S T201S",4
"lib2","SARS-CoV-2","GCAAACTACATTCCGG",2,17.64,10.22,-0.62,0.1,2.68,1.01,0.01,">1 nonsynonymous","N24F I142V",2
"lib2","SARS-CoV-2","GCAAACTAGTCTAATC",2,34.08,10.17,-0.66,0.08,2.69,1.09,0,">1 nonsynonymous","G9F W23F V173W",3
"lib2","SARS-CoV-2","GCAAACTCAAATCGCG",7,122.46,10.21,-0.63,0.04,2.83,1.01,0,">1 nonsynonymous","K48I A67F",2
"lib2","SARS-CoV-2","GCAAACTCATACTTTT",2,29.36,10.53,-0.31,0.04,2.8,1.2,0,">1 nonsynonymous","A33L D59G P96S I104F",4
"lib2","SARS-CoV-2","GCAAACTCCAATGAAT",7,0.1,NA,NA,NA,NA,NA,NA,"stop","R27L Y35I G83Q G146* T201L",5
"lib2","SARS-CoV-2","GCAAACTGGATTTTCA",7,182.52,10.93,0.09,0.05,2.88,1.12,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","GCAAACTTTACTTTCA",7,56.65,10.83,-0.01,0.06,2.8,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAAGAAAAACGGAT",2,9.29,10.28,-0.56,0.08,2.99,1.06,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GCAAAGAAAAGAAAAT",4,72.17,10.7,-0.13,0.03,2.99,1.03,0,">1 nonsynonymous","V32C G51N",2
"lib2","SARS-CoV-2","GCAAAGAAACGACTGT",1,0.25,NA,NA,NA,NA,NA,NA,"stop","T46S D59A P161* P169S",4
"lib2","SARS-CoV-2","GCAAAGAACAACACCA",7,135.81,8.12,-2.72,0.15,1.98,1.09,0.01,">1 nonsynonymous","C150S Q163Y",2
"lib2","SARS-CoV-2","GCAAAGACGAATAACG",9,0.14,NA,NA,NA,NA,NA,NA,"stop","T15* N30M N40D D98R F156Q",5
"lib2","SARS-CoV-2","GCAAAGACTATTAGGA",6,81.05,9.86,-0.98,0.07,2.32,1.06,0,">1 nonsynonymous","A14Y P191R",2
"lib2","SARS-CoV-2","GCAAAGAGTTGATAGA",4,99.32,10.52,-0.31,0.06,2.98,1.03,0,">1 nonsynonymous","N30S V173Y",2
"lib2","SARS-CoV-2","GCAAAGATACTAAATA",9,127.49,9.69,-1.15,0.03,2.37,1.05,0,">1 nonsynonymous","A42P Y121N E141R",3
"lib2","SARS-CoV-2","GCAAAGATTAAGAATC",1,13.5,10.09,-0.74,0.19,2.49,1,0.01,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","GCAAAGCAGCATAGCA",2,22.06,9.24,-1.59,0.26,1.7,1,0.05,">1 nonsynonymous","G86K S129V",2
"lib2","SARS-CoV-2","GCAAAGCATGCCGCGG",6,52.58,10.54,-0.29,0.03,2.96,1.03,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","GCAAAGCCCTACGGCA",6,35.03,10.2,-0.64,0.11,2.65,1.07,0.01,">1 nonsynonymous","A89G L122M",2
"lib2","SARS-CoV-2","GCAAAGCGCCCGCATT",1,28.8,10.69,-0.15,0.05,2.86,1.14,0,">1 nonsynonymous","G9F A42T",2
"lib2","SARS-CoV-2","GCAAAGCGGCCTGCGC",8,139.36,10.86,0.03,0.05,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAAAGCTCTCGAAAC",2,0.84,NA,NA,NA,NA,NA,NA,"stop","K26R I88*",2
"lib2","SARS-CoV-2","GCAAAGGAGACCAGAT",7,220.03,10.1,-0.74,0.06,2.74,1.05,0,">1 nonsynonymous","L5T N40P K56N I142T",4
"lib2","SARS-CoV-2","GCAAAGGAGTTTCTCG",7,78.29,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","P54W G86N P177R S184T",4
"lib2","SARS-CoV-2","GCAAAGGGCGGCATAA",9,228.72,10.75,-0.08,0.03,2.94,1.07,0,">1 nonsynonymous","K56A Y178F",2
"lib2","SARS-CoV-2","GCAAAGGTATGGAAAG",15,372.73,8.12,-2.72,0.13,2.94,1.06,0.01,">1 nonsynonymous","K48H K87N F126A",3
"lib2","SARS-CoV-2","GCAAAGGTGAGGAAGC",3,119.02,10.2,-0.64,0.04,2.79,1.04,0,">1 nonsynonymous","L60N G83H S129Y",3
"lib2","SARS-CoV-2","GCAAAGTAATGATAAA",9,81.67,10.76,-0.08,0.06,2.87,1.16,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","GCAAAGTCACAAGAAA",5,101.31,10.92,0.08,0.05,2.92,1.1,0,"1 nonsynonymous","S53E",1
"lib2","SARS-CoV-2","GCAAAGTCATCCAATA",4,0.07,NA,NA,NA,NA,NA,NA,"stop","W23C S36R N64R F99G R124G E141* K198G",7
"lib2","SARS-CoV-2","GCAAAGTTCTTTAAAG",1,7.08,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","E10T P96M Y159N Y165S P197M",5
"lib2","SARS-CoV-2","GCAAATAAATATCTGC",5,99.73,11,0.16,0.06,2.97,1.04,0,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","GCAAATAACGGGGTAG",1,0.96,NA,NA,NA,NA,NA,NA,"stop","F44* Y91H L187Q",3
"lib2","SARS-CoV-2","GCAAATAATTTATAAG",9,94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1V R136K G172R",3
"lib2","SARS-CoV-2","GCAAATAATTTATATA",4,57.8,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K56L I80K Y143T",3
"lib2","SARS-CoV-2","GCAAATACCTAAGTGG",5,15.06,9.71,-1.13,0.1,1.89,1.17,0.01,">1 nonsynonymous","C6R C61S G83Q",3
"lib2","SARS-CoV-2","GCAAATACGAAAGACG",2,24.97,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G51T G86L",2
"lib2","SARS-CoV-2","GCAAATACTAAATTTA",10,120.14,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F17M W23M V37L L57I I72L",5
"lib2","SARS-CoV-2","GCAAATAGAAGCGACA",1,97.04,10.53,-0.31,0.04,2.88,1.12,0,">1 nonsynonymous","Y39C D75S",2
"lib2","SARS-CoV-2","GCAAATAGAGACAACG",3,13.85,6,-4.84,1.97,1.5,1.07,0.04,">1 nonsynonymous","K56W D97N F126W R136N P149M",5
"lib2","SARS-CoV-2","GCAAATAGTTTATGGA",1,6.9,10.89,0.06,0.16,2.9,1.09,0.01,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","GCAAATATGTATTTCG",4,111.07,9.78,-1.05,0.08,2.25,1.07,0,">1 nonsynonymous","G83H F99W A105W",3
"lib2","SARS-CoV-2","GCAAATATTCAAAAAC",8,128.2,10.87,0.03,0.04,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAATCAAATGTCTA",2,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S F47D F167L G172T",4
"lib2","SARS-CoV-2","GCAAATCAACACTTAT",4,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17M A89S E141Y C150T",4
"lib2","SARS-CoV-2","GCAAATCAACTAATCA",5,27.77,6.01,-4.83,0.8,1.5,1.21,0.01,">1 nonsynonymous","P82Y N110I S139I F160Y",4
"lib2","SARS-CoV-2","GCAAATCAAGGATTCA",2,0.81,NA,NA,NA,NA,NA,NA,"stop","F70* A89H G152S Y165F",4
"lib2","SARS-CoV-2","GCAAATCATAACACCG",11,45.7,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","I2K G101D E154R S164N",4
"lib2","SARS-CoV-2","GCAAATCCGAAAAGCT",3,47.91,8.09,-2.74,0.15,1.77,1.06,0.01,">1 nonsynonymous","N58D Y121G",2
"lib2","SARS-CoV-2","GCAAATCGAAAAACAT",5,49.66,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D90S D98F N107L Y123S E141R G166E",6
"lib2","SARS-CoV-2","GCAAATCGCAGCCATT",1,29.74,10.17,-0.66,0.1,2.6,1.24,0.01,">1 nonsynonymous","R16D L60V G152F",3
"lib2","SARS-CoV-2","GCAAATCTAATCGATC",3,19.84,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C102A G155C",2
"lib2","SARS-CoV-2","GCAAATGAACCGGGAA",3,46.5,8.52,-2.31,0.1,2.7,1.09,0,">1 nonsynonymous","S43T T170I",2
"lib2","SARS-CoV-2","GCAAATGACGCATGCA",3,36.24,10.81,-0.02,0.04,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAATGAGCCACCAC",1,35.17,8.49,-2.34,0.1,2.67,1.06,0,">1 nonsynonymous","K48L N157T",2
"lib2","SARS-CoV-2","GCAAATGCTAATTACA",1,108.7,10.66,-0.17,0.02,2.91,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAAATGCTTTCGGGA",2,55.15,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N1S N157F F185V T201P",4
"lib2","SARS-CoV-2","GCAAATGGAACCAAAT",2,53.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L5K Y50S D97L Y178I",4
"lib2","SARS-CoV-2","GCAAATTACCTCCTCT",5,51.71,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G9L T63I V77W",3
"lib2","SARS-CoV-2","GCAAATTACTCTTTAT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","P7* C102V K198N",3
"lib2","SARS-CoV-2","GCAAATTAGCAAGACA",10,172.39,10.63,-0.21,0.04,2.91,1.07,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","GCAAATTATATCCTGG",3,104.03,9.13,-1.7,0.08,1.84,1.07,0,">1 nonsynonymous","L38N F47M V173A",3
"lib2","SARS-CoV-2","GCAAATTCAACCCGGC",5,74.75,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y93H S139D G155V",3
"lib2","SARS-CoV-2","GCAAATTCTTAGTCTG",7,22.89,6.89,-3.95,0.28,1.5,1.05,0.02,">1 nonsynonymous","D90F D112A",2
"lib2","SARS-CoV-2","GCAAATTGTAGTAAAC",16,11.18,NA,NA,NA,NA,NA,NA,"stop","A42* F160S Q168F",3
"lib2","SARS-CoV-2","GCAAATTTACTCCGGT",1,3.69,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCAACAAAAAGTTTTC",2,23.41,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A14R A42V V103C T201N",4
"lib2","SARS-CoV-2","GCAACAAAAATTCTTT",4,4.6,NA,NA,NA,NA,NA,NA,"stop","C6A S19L Y50S N118V S129*",5
"lib2","SARS-CoV-2","GCAACAAAAGACTTTT",6,33.87,8.54,-2.3,0.29,1.5,1.16,0.03,">1 nonsynonymous","I104Q T201I",2
"lib2","SARS-CoV-2","GCAACAAAGAAACTGG",3,33.62,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86D Y123D",2
"lib2","SARS-CoV-2","GCAACAAAGGCTTAAT",7,149.42,9.79,-1.05,0.03,2.9,1.06,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","GCAACAAATGAGCTGA",7,70.56,11.26,0.42,0.04,2.96,1.05,0,"1 nonsynonymous","N171Y",1
"lib2","SARS-CoV-2","GCAACAACTACCCGTT",7,90.64,7.73,-3.11,0.3,1.5,1.19,0.03,">1 nonsynonymous","F44V P133L N151L",3
"lib2","SARS-CoV-2","GCAACAACTTTAGCGC",7,25.99,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","I2R R27L D90H I104C V181Y V182I A190I S200G",8
"lib2","SARS-CoV-2","GCAACAAGTTAACCAC",12,8.78,NA,NA,NA,NA,NA,NA,"stop","N64* F99Y",2
"lib2","SARS-CoV-2","GCAACAATAACCGATT",1,16.17,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D137M G155Y F167S",3
"lib2","SARS-CoV-2","GCAACAATACTACGGA",10,118.34,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F12R R27G L60A K128L",4
"lib2","SARS-CoV-2","GCAACAATGCCAATAA",11,111.18,9.8,-1.04,0.06,2.17,1.08,0,">1 nonsynonymous","F8V L60F T148F",3
"lib2","SARS-CoV-2","GCAACAATTTGCCGAA",4,132.16,9.95,-0.88,0.07,2.24,1.07,0,">1 nonsynonymous","A14G F62G",2
"lib2","SARS-CoV-2","GCAACACACAGCACAA",7,128.23,10.82,-0.02,0.04,2.92,1.09,0,">1 nonsynonymous","N24A T100I",2
"lib2","SARS-CoV-2","GCAACACACGCGAACA",3,106.77,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F17R D90W F134C G146W G155M Q163C Y178K",7
"lib2","SARS-CoV-2","GCAACACAGTTGTCAC",4,54.26,10.39,-0.44,0.04,2.83,1.05,0,">1 nonsynonymous","A14M V52I",2
"lib2","SARS-CoV-2","GCAACACATAGTATGC",5,191.12,8.63,-2.21,0.08,2.21,1.1,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","GCAACACCATTGGCAA",8,0.74,NA,NA,NA,NA,NA,NA,"stop","Y93* T100I Y123V",3
"lib2","SARS-CoV-2","GCAACACCCATGACAT",3,12.52,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","C61V V103R L122N",3
"lib2","SARS-CoV-2","GCAACACCCTGATGTA",14,81.11,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K48N T55K C61H I88C G116S Y123V E141S",7
"lib2","SARS-CoV-2","GCAACACCTGATAGCA",1,17.63,10.81,-0.02,0.07,3,1.01,0,"1 nonsynonymous","R136K",1
"lib2","SARS-CoV-2","GCAACACGATTTGACA",1,41.7,10.26,-0.57,0.04,2.96,1,0,">1 nonsynonymous","S19D K132E",2
"lib2","SARS-CoV-2","GCAACACTAATATCAC",3,6.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E S41R R127W",3
"lib2","SARS-CoV-2","GCAACACTCCCCTATT",1,66.95,10.8,-0.03,0.05,2.94,1.08,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","GCAACACTTACGGCAC",8,146.25,10.14,-0.7,0.04,2.86,1.05,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","GCAACACTTGCGGCAA",4,5.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S43R G86L I104R G152L T170K V180S",6
"lib2","SARS-CoV-2","GCAACAGAAACGTATT",1,1.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","GCAACAGACAGCGAGC",1,10.23,10.58,-0.25,0.1,2.86,1.12,0,">1 nonsynonymous","N4A V32L G152R",3
"lib2","SARS-CoV-2","GCAACAGACCGAACTT",4,0,NA,NA,NA,NA,NA,NA,"stop","S113* Y123K",2
"lib2","SARS-CoV-2","GCAACAGCCCACTAAT",11,107.71,9.28,-1.56,0.06,1.79,1.08,0,">1 nonsynonymous","L5I C61S C102F K132M",4
"lib2","SARS-CoV-2","GCAACAGGAGCGCACG",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A G83R D98T",3
"lib2","SARS-CoV-2","GCAACAGGTTCTAACT",2,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L N157I",2
"lib2","SARS-CoV-2","GCAACATACGTTCTTT",6,36.24,10.55,-0.29,0.05,2.99,1.02,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","GCAACATAGAAGTTAA",5,0.43,NA,NA,NA,NA,NA,NA,"stop","L5S A33R V71* A105M G117L",5
"lib2","SARS-CoV-2","GCAACATAGCGATTTC",5,4.22,NA,NA,NA,NA,NA,NA,"stop","G9A S36K D68* L122S",4
"lib2","SARS-CoV-2","GCAACATCAACCGACC",5,44.8,10.8,-0.03,0.03,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAACATCAATCACCC",2,118.63,6.46,-4.38,0.29,1.72,1.12,0.01,">1 nonsynonymous","A33R Y119S S129F Q144V P197D",5
"lib2","SARS-CoV-2","GCAACATCACCGCAAG",6,84.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S69M I80W",2
"lib2","SARS-CoV-2","GCAACATGAGGCTTAA",2,43.67,10.21,-0.63,0.06,2.89,1.13,0,">1 nonsynonymous","R73M T201S",2
"lib2","SARS-CoV-2","GCAACATTCTTCATCA",2,45.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19K F62T Y121A",3
"lib2","SARS-CoV-2","GCAACATTTAATACCA",1,25.37,9.44,-1.4,0.06,2.9,1.13,0,">1 nonsynonymous","L5D Y119V",2
"lib2","SARS-CoV-2","GCAACATTTGACGATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31E A89D",2
"lib2","SARS-CoV-2","GCAACCAACTAACTAA",1,7.85,7.27,-3.57,0.41,1.5,1.13,0.03,">1 nonsynonymous","L5N I28M V182L",3
"lib2","SARS-CoV-2","GCAACCAACTATAACA",2,15.26,10.13,-0.7,0.09,2.8,1.03,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","GCAACCAGAGTCAATA",6,104.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T85R Y91C Q168P Y178V",4
"lib2","SARS-CoV-2","GCAACCAGCGAGTAAT",13,336.54,10.45,-0.39,0.04,2.94,1.05,0,"1 nonsynonymous","G174D",1
"lib2","SARS-CoV-2","GCAACCATAAAACAAC",1,2.33,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","GCAACCATAAAGCAAT",10,59.57,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V103F C150L N157T T170V",4
"lib2","SARS-CoV-2","GCAACCATAGCAAGCA",4,10.71,6,-4.84,2,3,1.02,0,">1 nonsynonymous","L57K F99S Q144V P149L",4
"lib2","SARS-CoV-2","GCAACCATGCTTGACG",1,22.95,6,-4.84,0.78,3,1.16,0.01,">1 nonsynonymous","G9L G86K P96G",3
"lib2","SARS-CoV-2","GCAACCCCATGTATGC",6,81.19,10.7,-0.14,0.04,2.89,1.12,0,"1 nonsynonymous","S184A",1
"lib2","SARS-CoV-2","GCAACCCGAATGATAC",1,28.59,8.88,-1.96,0.15,2.11,1.11,0.01,">1 nonsynonymous","D90T Y143L",2
"lib2","SARS-CoV-2","GCAACCCTACCCAATC",3,321.09,10.78,-0.06,0.04,2.94,1.07,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","GCAACCGTTCGCCCAA",5,144.88,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y121L P177L",2
"lib2","SARS-CoV-2","GCAACCTATTAAAGCG",7,0.12,NA,NA,NA,NA,NA,NA,"stop","Y50L G116S F160*",3
"lib2","SARS-CoV-2","GCAACGAAAGCTTTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T D90R A105E T201N",4
"lib2","SARS-CoV-2","GCAACGAAATTTAATA",7,1.38,NA,NA,NA,NA,NA,NA,"stop","V37A S41* S53T",3
"lib2","SARS-CoV-2","GCAACGAACATCGCAA",7,6.76,7.36,-3.48,0.45,1.5,1.48,0.06,">1 nonsynonymous","N1L Y50S",2
"lib2","SARS-CoV-2","GCAACGAACTTGACCA",2,47.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32K G86S Y175D",3
"lib2","SARS-CoV-2","GCAACGAATCGAACAG",2,11.95,8.85,-1.99,0.07,3,1.04,0,">1 nonsynonymous","V32Q F126R",2
"lib2","SARS-CoV-2","GCAACGACACAAACGC",6,25.81,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","R127L P133T",2
"lib2","SARS-CoV-2","GCAACGACCATTTAAG",5,31.09,8.18,-2.66,0.3,1.5,1.02,0.04,">1 nonsynonymous","Y35L P82M S113T S129D",4
"lib2","SARS-CoV-2","GCAACGACTGAATTAA",3,63.71,10.33,-0.51,0.05,2.85,1.1,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","GCAACGACTTTTAAAA",1,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F F160I",2
"lib2","SARS-CoV-2","GCAACGAGTACTCTCC",10,65.38,6.59,-4.24,0.38,1.5,1.22,0.02,">1 nonsynonymous","A42T N58W D98A P161S",4
"lib2","SARS-CoV-2","GCAACGAGTGCACAAA",7,83.41,10.71,-0.12,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAACGATAACGCCAT",8,12.18,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N1Q T148I V182Y",3
"lib2","SARS-CoV-2","GCAACGCAACATATAG",5,92.85,9.77,-1.07,0.06,2.37,1.07,0,">1 nonsynonymous","C31R K128L S147N",3
"lib2","SARS-CoV-2","GCAACGCAACGTACCC",23,458.04,10.2,-0.63,0.04,2.46,1.02,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","GCAACGCGGGAATAAT",3,13.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13M D90S D112V",3
"lib2","SARS-CoV-2","GCAACGCTCAGCGTGG",9,4.16,NA,NA,NA,NA,NA,NA,"stop","F12L Y123* G146Y",3
"lib2","SARS-CoV-2","GCAACGCTTTATAAAT",4,59.28,10.56,-0.28,0.03,2.96,1.04,0,">1 nonsynonymous","V37Q F44T",2
"lib2","SARS-CoV-2","GCAACGGAAAAGTTTA",9,129.86,10.48,-0.36,0.06,2.8,1.03,0,">1 nonsynonymous","A22T P54S E141D E154K",4
"lib2","SARS-CoV-2","GCAACGGAAATTTACA",3,71.6,10.1,-0.74,0.05,2.86,1.03,0,">1 nonsynonymous","L5D A67L P96S F156I",4
"lib2","SARS-CoV-2","GCAACGGAATTAGTTA",3,26.92,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V77G I104D N107F",3
"lib2","SARS-CoV-2","GCAACGGACCTAAGAC",4,61.99,10.11,-0.73,0.08,2.47,1.06,0,">1 nonsynonymous","Y50H P149T",2
"lib2","SARS-CoV-2","GCAACGGATTCTACCT",3,13.15,10.24,-0.6,0.09,2.77,1,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","GCAACGGCCAAGAAGC",2,36.62,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V11A K48W D59L C150I F156W P177D",6
"lib2","SARS-CoV-2","GCAACGGTCTAGAATG",5,12.33,6.05,-4.78,0.86,1.5,1.12,0.02,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","GCAACTAAATCGAAAT",2,68.59,10.91,0.07,0.05,2.99,1.02,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","GCAACTAACAACCTAG",7,106.7,9.81,-1.02,0.03,2.94,1.06,0,">1 nonsynonymous","P96A G174L",2
"lib2","SARS-CoV-2","GCAACTAAGAATGTAT",3,13.69,10.15,-0.69,0.16,2.16,1.03,0.01,"1 nonsynonymous","Y91G",1
"lib2","SARS-CoV-2","GCAACTACACGAAAAT",7,83.44,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6I Y50S N107L V115P E141R Q176P",6
"lib2","SARS-CoV-2","GCAACTACCTACAAAC",11,91.48,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K26L V65C F99G",3
"lib2","SARS-CoV-2","GCAACTAGACGTATTT",1,13.23,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","D112Y L125T G172V T201L",4
"lib2","SARS-CoV-2","GCAACTAGCAATAATT",7,37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N64T A105P F126A I138S F167H",5
"lib2","SARS-CoV-2","GCAACTATAAAATACA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41F T100N L122D G174*",4
"lib2","SARS-CoV-2","GCAACTATAGGACAAA",3,36.47,7.75,-3.09,0.31,1.64,1.15,0.03,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","GCAACTATCTCAAGCA",2,12.14,6,-4.84,2,2.31,1.07,0.01,">1 nonsynonymous","C61T L162Q V173T V181L",4
"lib2","SARS-CoV-2","GCAACTATGACCTTTA",6,140.49,10.6,-0.23,0.05,2.95,1.04,0,">1 nonsynonymous","S19A L38F P197M",3
"lib2","SARS-CoV-2","GCAACTATGGAAAACA",2,66.97,10.77,-0.06,0.04,2.92,1.06,0,">1 nonsynonymous","P54L P149I",2
"lib2","SARS-CoV-2","GCAACTCAACCCGGTT",9,111.6,10.75,-0.08,0.03,3,1.01,0,">1 nonsynonymous","D90M T201L",2
"lib2","SARS-CoV-2","GCAACTCACTATAAAT",4,9,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","P82N L95K L122R S139W P149S",5
"lib2","SARS-CoV-2","GCAACTCAGAAAGTAG",2,13.03,8.15,-2.69,0.26,1.5,1.1,0.04,">1 nonsynonymous","Y35K L57A D75K K132M T201K",5
"lib2","SARS-CoV-2","GCAACTCAGTTAACCC",1,2.09,NA,NA,NA,NA,NA,NA,"stop","F17L W23L F47N L131* E141T V173M",6
"lib2","SARS-CoV-2","GCAACTCTGATTAAGT",3,32.73,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P54G K56N G86D P133L",4
"lib2","SARS-CoV-2","GCAACTCTGCGAACGA",4,0.57,NA,NA,NA,NA,NA,NA,"stop","A33* L38S W106S S147F C158E",5
"lib2","SARS-CoV-2","GCAACTGATCATAACC",8,104.14,9.31,-1.53,0.09,2.25,1.08,0,">1 nonsynonymous","V77Q G174R",2
"lib2","SARS-CoV-2","GCAACTGCAAAGCTTT",15,43.14,8.73,-2.1,0.4,1.5,1,0.06,"1 nonsynonymous","R127W",1
"lib2","SARS-CoV-2","GCAACTTAATACAGTG",4,1.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T46N",1
"lib2","SARS-CoV-2","GCAACTTCTAACAAAT",1,11.39,9.44,-1.39,0.09,3,1.01,0,">1 nonsynonymous","I142S T148L",2
"lib2","SARS-CoV-2","GCAACTTGCCCAACTT",6,103.6,10.73,-0.1,0.03,2.96,1.05,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","GCAACTTGCCCCTTTA",7,30.2,10.49,-0.35,0.06,2.95,1.06,0,"1 nonsynonymous","N58C",1
"lib2","SARS-CoV-2","GCAAGAAAAAAAGTGA",7,50.73,6.62,-4.22,0.56,1.79,1.25,0.03,">1 nonsynonymous","I2F V11M W106L Y121T L188C",5
"lib2","SARS-CoV-2","GCAAGAAAACGCCATA",7,1.74,NA,NA,NA,NA,NA,NA,"stop","T15Y F99I Y175*",3
"lib2","SARS-CoV-2","GCAAGAAAACTATTAA",3,40.3,10.77,-0.07,0.12,2.86,1.08,0.01,"1 nonsynonymous","T148M",1
"lib2","SARS-CoV-2","GCAAGAAACGACAGAG",5,123.51,10.59,-0.25,0.04,2.93,1.07,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","GCAAGAAGAATATGCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S45R P82S G83V P96R N157K",6
"lib2","SARS-CoV-2","GCAAGAAGCTAAAAAA",6,120.27,10.71,-0.13,0.04,2.87,1.15,0,">1 nonsynonymous","K114R N130L",2
"lib2","SARS-CoV-2","GCAAGAAGTATCCTGC",4,44.45,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","T85A D112S R124N",3
"lib2","SARS-CoV-2","GCAAGAATATTAACCT",2,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82L D90R G117H",3
"lib2","SARS-CoV-2","GCAAGAATTTATGGCG",2,27.78,9.27,-1.57,0.16,1.76,1,0.01,">1 nonsynonymous","S29W S45E I88L",3
"lib2","SARS-CoV-2","GCAAGAATTTTAATGT",3,45.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N92T D97K R179N",3
"lib2","SARS-CoV-2","GCAAGACAACTCTACC",2,1.51,NA,NA,NA,NA,NA,NA,"stop","P82* V181Y",2
"lib2","SARS-CoV-2","GCAAGACAATATCTGA",9,75.36,8.76,-2.07,0.07,1.5,1.05,0,"1 nonsynonymous","G86E",1
"lib2","SARS-CoV-2","GCAAGACACACAATAA",2,16.66,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21H R124G E135H",3
"lib2","SARS-CoV-2","GCAAGACCCAGCATAA",2,15.89,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","S113I L162M",2
"lib2","SARS-CoV-2","GCAAGACCCGCCGCCG",1,48.2,8.45,-2.39,0.16,2.23,1.2,0.01,">1 nonsynonymous","A81V F126R",2
"lib2","SARS-CoV-2","GCAAGACCGCAGATAA",11,90.18,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S19L N40V N120R F156L",4
"lib2","SARS-CoV-2","GCAAGACGATTCCATT",1,19.75,9.11,-1.72,0.23,1.63,1.21,0.03,">1 nonsynonymous","A81F Y119S D137R Q163C T193F T201E",6
"lib2","SARS-CoV-2","GCAAGACGATTCTTTG",2,32.99,10.02,-0.82,0.11,2.25,1.01,0,">1 nonsynonymous","Y39D F44S Y123F E154D",4
"lib2","SARS-CoV-2","GCAAGACTAAGGATGC",5,0.79,NA,NA,NA,NA,NA,NA,"stop","Y66*",1
"lib2","SARS-CoV-2","GCAAGACTAGTTTACC",3,39.33,10.56,-0.28,0.05,2.93,1.08,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","GCAAGACTCAAATGAA",2,35.55,8.59,-2.25,0.14,2.84,1.16,0.01,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","GCAAGAGAAACGAATT",9,81.71,10.82,-0.02,0.05,2.98,1.04,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GCAAGAGAGTTACTAA",7,37.43,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y93A F99T K128N S184T",4
"lib2","SARS-CoV-2","GCAAGAGCGTCCAGGT",5,15.2,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P82I D98L Y123L C158A G172W",5
"lib2","SARS-CoV-2","GCAAGAGGCACTACTA",6,39.08,9.46,-1.37,0.09,1.92,1.08,0,"1 nonsynonymous","I28R",1
"lib2","SARS-CoV-2","GCAAGAGGTTGACATA",6,0,NA,NA,NA,NA,NA,NA,"stop","C49* P191I",2
"lib2","SARS-CoV-2","GCAAGATATAATATAA",2,13.12,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y93G E135W S139N K198L",4
"lib2","SARS-CoV-2","GCAAGATGATAACACC",11,50.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119V E135V A145L Q168R",4
"lib2","SARS-CoV-2","GCAAGATTATAAAGTT",4,41.84,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T63L Y91S N107I S147V",4
"lib2","SARS-CoV-2","GCAAGATTCGAGGACC",2,108.8,9.1,-1.73,0.07,1.94,1.08,0,">1 nonsynonymous","C6V N40L F160C",3
"lib2","SARS-CoV-2","GCAAGATTGAATTTTC",6,22.84,8.82,-2.01,0.19,1.64,1.11,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GCAAGCAAATAGTATT",9,114.94,10.82,-0.02,0.06,2.95,1.08,0,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","GCAAGCAACACTCACC",1,0.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I142K",1
"lib2","SARS-CoV-2","GCAAGCACACCTTCAC",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K R127L F134L T201A",4
"lib2","SARS-CoV-2","GCAAGCACTACGTATC",5,147.91,10.87,0.03,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAGCATATGACCCG",4,44.58,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S45I F62S N157P Q168P",4
"lib2","SARS-CoV-2","GCAAGCATTCTAACTT",5,1.16,NA,NA,NA,NA,NA,NA,"stop","K87W D97G L125P L131P N171K S200*",6
"lib2","SARS-CoV-2","GCAAGCATTCTTTATA",1,39.11,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12W L38P K87D D97L G166T L187K T201M",7
"lib2","SARS-CoV-2","GCAAGCATTGAAGAGA",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R F156A V182K",3
"lib2","SARS-CoV-2","GCAAGCCATTGCTCAG",4,65.79,10.7,-0.14,0.04,2.86,1.16,0,">1 nonsynonymous","S45D I138R",2
"lib2","SARS-CoV-2","GCAAGCCCTGGCTTCC",19,253.89,8.27,-2.56,0.1,2.01,1.06,0,">1 nonsynonymous","A14I F44R K87Y Y119M",4
"lib2","SARS-CoV-2","GCAAGCGCCAACTCTG",5,31.72,10.8,-0.04,0.07,2.86,1.1,0,"1 nonsynonymous","S45Q",1
"lib2","SARS-CoV-2","GCAAGCGGTGACCGGC",14,205.66,10.51,-0.32,0.04,2.9,1.07,0,">1 nonsynonymous","F8W A14V",2
"lib2","SARS-CoV-2","GCAAGCTAAACTAAAA",2,35.58,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","S41Y K56V S69L D97S T100D N151E",6
"lib2","SARS-CoV-2","GCAAGCTACCACTGCG",3,35.28,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N92L V103C Q144Y P169R",4
"lib2","SARS-CoV-2","GCAAGCTAGGACGGTA",2,8.58,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","Y91G C150S",2
"lib2","SARS-CoV-2","GCAAGCTCCAAACAAT",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K A89R K128C P149D V173C",5
"lib2","SARS-CoV-2","GCAAGCTGACACCTAG",5,57.45,8.38,-2.46,0.16,1.71,1.03,0.01,">1 nonsynonymous","L60K N107L",2
"lib2","SARS-CoV-2","GCAAGGACTACACAAA",8,135.28,10.83,0,0.04,2.95,1.08,0,">1 nonsynonymous","T55H E154S",2
"lib2","SARS-CoV-2","GCAAGGAGGGGTATGT",1,21.3,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","P82S A89S W106L L131P Y178L",5
"lib2","SARS-CoV-2","GCAAGGATAGCCCTCC",4,7.85,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R25E N58T G101P I138G E186A T201R",6
"lib2","SARS-CoV-2","GCAAGGCACACATCGC",13,277.15,10.86,0.03,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAAGGCAGTCAACAA",4,29.07,6.23,-4.61,1.09,1.5,1.21,0.05,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","GCAAGGCTGACTCGAG",1,55.71,7.99,-2.84,0.16,1.85,1.08,0.01,">1 nonsynonymous","G51Y E141N G166T",3
"lib2","SARS-CoV-2","GCAAGGGCCAGAACAG",5,25.42,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","V20L Y165V",2
"lib2","SARS-CoV-2","GCAAGGGGGCAACACT",2,32.65,10.72,-0.11,0.08,2.93,1.09,0,">1 nonsynonymous","S43G T201I",2
"lib2","SARS-CoV-2","GCAAGGTACTGCCAAA",1,10.19,9.21,-1.63,0.42,1.56,1,0.03,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","GCAAGTAAACTATCTC",5,0.4,NA,NA,NA,NA,NA,NA,"stop","F12* A33R K87C Y121V R127H Y178T",6
"lib2","SARS-CoV-2","GCAAGTAAATACGGAC",7,5.68,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V103W",1
"lib2","SARS-CoV-2","GCAAGTAACGGTTACA",6,4.58,NA,NA,NA,NA,NA,NA,"stop","T15D C49Y N92* Y119C I142Y C150Y",6
"lib2","SARS-CoV-2","GCAAGTAAGCGTTCCT",1,20.94,10.69,-0.14,0.06,3,1.02,0,"1 nonsynonymous","A22R",1
"lib2","SARS-CoV-2","GCAAGTAATAAGATCA",2,11.69,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y143S Q176M",2
"lib2","SARS-CoV-2","GCAAGTACAAAGTTTA",3,59.39,10.02,-0.81,0.06,2.65,1.04,0,">1 nonsynonymous","I2F Y66N I104L G116R K128R",5
"lib2","SARS-CoV-2","GCAAGTAGAAATACCA",5,124.41,10.72,-0.12,0.08,2.82,1.12,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","GCAAGTAGCAGCTATA",4,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K K94A A190S T201R",4
"lib2","SARS-CoV-2","GCAAGTAGGAATCTAC",2,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y D137R N171Y",3
"lib2","SARS-CoV-2","GCAAGTATAAAATAAA",1,31.07,10.77,-0.07,0.12,2.96,1.07,0.01,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","GCAAGTATGACCGCAG",12,112.89,8.4,-2.44,0.17,1.66,1.08,0.01,">1 nonsynonymous","N40K K87N N107L",3
"lib2","SARS-CoV-2","GCAAGTCGATGCCAGG",1,54.76,10.86,0.02,0.04,2.93,1.05,0,"1 nonsynonymous","P54W",1
"lib2","SARS-CoV-2","GCAAGTCGGACCTGGT",3,18.79,9.93,-0.91,0.13,2.64,1.03,0.01,">1 nonsynonymous","Y91C D98S K128T",3
"lib2","SARS-CoV-2","GCAAGTCTTAATTTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","R78* F99G E141H F160A F167L",5
"lib2","SARS-CoV-2","GCAAGTCTTCATAAGT",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13A C49A",2
"lib2","SARS-CoV-2","GCAAGTGAAGACGAGG",1,12.47,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","L5V A14E K87Q S113H N151T",5
"lib2","SARS-CoV-2","GCAAGTGACGCCTGTG",10,193.07,10.75,-0.08,0.03,2.89,1.12,0,">1 nonsynonymous","A33V F160N",2
"lib2","SARS-CoV-2","GCAAGTGAGAACGAGG",1,18.63,6,-4.84,1.46,1.5,1.14,0.06,">1 nonsynonymous","T3F N118D P133L E154L G174L",5
"lib2","SARS-CoV-2","GCAAGTGTTAGCAGTT",8,136.99,10.8,-0.04,0.04,2.93,1.08,0,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","GCAAGTTAAGAGGAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64A G86A D112L",3
"lib2","SARS-CoV-2","GCAAGTTTAGGAAATA",4,17.05,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D34S K48F D112G",3
"lib2","SARS-CoV-2","GCAAGTTTGCTATTAA",9,102.82,10.67,-0.17,0.03,2.92,1.07,0,">1 nonsynonymous","S43F L60R",2
"lib2","SARS-CoV-2","GCAATAAAAAATATTA",9,49.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44L V71H G166V",3
"lib2","SARS-CoV-2","GCAATAAAAATGATAC",7,1.52,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","GCAATAAAACTCTTCT",2,29.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y21R N107Y G152V F156T L183W",5
"lib2","SARS-CoV-2","GCAATAAACAGAACAA",9,0.37,NA,NA,NA,NA,NA,NA,"stop","T100G L122* S129I",3
"lib2","SARS-CoV-2","GCAATAAACAGGGTTT",10,46.1,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","I104T C150T",2
"lib2","SARS-CoV-2","GCAATAAAGATCCTTA",16,143.91,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","G101W",1
"lib2","SARS-CoV-2","GCAATAAATCTCGGCG",7,56.38,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F17E L60S P82M S113T",4
"lib2","SARS-CoV-2","GCAATAACAAACATCA",1,66.57,10.54,-0.3,0.05,2.93,1.06,0,"1 nonsynonymous","D90W",1
"lib2","SARS-CoV-2","GCAATAACAATAAACA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35K Q84*",2
"lib2","SARS-CoV-2","GCAATAACAATATAGT",9,182.44,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A22Q L38K N58R N157T",4
"lib2","SARS-CoV-2","GCAATAACCAGCCGGT",2,29.48,9.26,-1.57,0.17,1.64,1.09,0.01,">1 nonsynonymous","F12T S139L",2
"lib2","SARS-CoV-2","GCAATAAGAGACAAAG",5,65.58,9.43,-1.4,0.16,1.85,1.12,0.01,">1 nonsynonymous","G51A D98L",2
"lib2","SARS-CoV-2","GCAATAAGAGTAGAAC",7,126.67,9.63,-1.21,0.04,2.84,1.08,0,">1 nonsynonymous","Y21W K87G",2
"lib2","SARS-CoV-2","GCAATAAGGTTCTGGT",7,48.02,6,-4.84,2,3,1.19,0,">1 nonsynonymous","P7M N13C R127M T140K",4
"lib2","SARS-CoV-2","GCAATAATCAATTTCA",7,56.22,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A22T I104Y G116N Y143N T170D",5
"lib2","SARS-CoV-2","GCAATACACTCGGGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104Q N107P",2
"lib2","SARS-CoV-2","GCAATACAGATAAATA",1,17.9,6.96,-3.88,0.36,1.5,1.11,0.04,">1 nonsynonymous","N4V I28E T63N",3
"lib2","SARS-CoV-2","GCAATACATACCGTTA",5,92.75,9.45,-1.39,0.1,2.3,1.06,0,">1 nonsynonymous","C6I S164V",2
"lib2","SARS-CoV-2","GCAATACCGACATGCT",7,84.84,10.84,0.01,0.12,2.7,1.07,0.01,">1 nonsynonymous","V37G S129V",2
"lib2","SARS-CoV-2","GCAATACGCCCATCTA",8,47.34,10.8,-0.03,0.08,2.89,1.15,0,"1 nonsynonymous","N40G",1
"lib2","SARS-CoV-2","GCAATACGCTCGCATT",2,35.74,6,-4.84,0.74,3,1.09,0,">1 nonsynonymous","R16D W23R A67C K87Y Y93T Q168R T201C",7
"lib2","SARS-CoV-2","GCAATACTGCTCAACG",3,40.7,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N4I T15L A33S N64I Y91M G155L",6
"lib2","SARS-CoV-2","GCAATACTGTACGATA",4,7.28,8.01,-2.82,0.33,1.57,1,0.03,">1 nonsynonymous","V65E L122P S200R",3
"lib2","SARS-CoV-2","GCAATAGAACTCGGGA",4,60.94,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8W T55Y I88A N92A K128S R136G T201K",7
"lib2","SARS-CoV-2","GCAATAGACACAGGCA",4,2.18,NA,NA,NA,NA,NA,NA,"stop","G9* C61* I88L F156S",4
"lib2","SARS-CoV-2","GCAATAGATGGCACGT",5,0.7,NA,NA,NA,NA,NA,NA,"stop","L57S N151K R179* T201S",4
"lib2","SARS-CoV-2","GCAATAGCATTTTCCT",4,66.43,6.53,-4.3,0.61,1.5,1.3,0.05,">1 nonsynonymous","A14W D112T E135W P161L",4
"lib2","SARS-CoV-2","GCAATAGCCGCGGAGT",1,25.57,10.78,-0.06,0.05,3,1,0,"1 nonsynonymous","S147T",1
"lib2","SARS-CoV-2","GCAATAGCGGGGAGTT",1,17.12,10.08,-0.76,0.09,2.68,1.03,0.01,">1 nonsynonymous","N1L A14K S36L",3
"lib2","SARS-CoV-2","GCAATAGCTGAGACAA",1,51.93,10.75,-0.09,0.04,2.91,1.08,0,">1 nonsynonymous","T15S I104L",2
"lib2","SARS-CoV-2","GCAATAGGTTCAAATC",5,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W N13V P82A K94D",4
"lib2","SARS-CoV-2","GCAATATAAAGGAATT",7,68.68,10.87,0.03,0.05,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAATATAAATAAGTT",1,6.64,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41F D59I G86V C102N",4
"lib2","SARS-CoV-2","GCAATATAATGCGTTC",2,39.52,8.2,-2.63,0.11,2.66,1.09,0,">1 nonsynonymous","G9S S36R Y143S",3
"lib2","SARS-CoV-2","GCAATATAGAATTCCT",11,218.55,10.79,-0.04,0.03,2.95,1.06,0,">1 nonsynonymous","G9E T63D S139T",3
"lib2","SARS-CoV-2","GCAATATATAGATATA",3,19.19,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K48G T100K E135P H189Y",4
"lib2","SARS-CoV-2","GCAATATGTGATGCCA",3,6.93,6.07,-4.76,0.67,1.5,1.16,0.01,">1 nonsynonymous","D68V E141R",2
"lib2","SARS-CoV-2","GCAATATTAGGAACTT",4,34.88,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N4V L95K",2
"lib2","SARS-CoV-2","GCAATCAACAAAGAAT",4,23.31,10.31,-0.52,0.08,3,1.01,0,"1 nonsynonymous","E76A",1
"lib2","SARS-CoV-2","GCAATCAATCCGTAAG",2,32.44,10.74,-0.1,0.05,2.9,1.08,0,">1 nonsynonymous","A22R R27K Y91F K128E",4
"lib2","SARS-CoV-2","GCAATCACATAACCAA",6,110.12,8.32,-2.52,0.13,2.7,1.07,0.01,">1 nonsynonymous","Y123K N157C",2
"lib2","SARS-CoV-2","GCAATCACGAATGCAA",1,13.17,8.3,-2.53,0.27,1.5,1,0.04,">1 nonsynonymous","P96N R136W",2
"lib2","SARS-CoV-2","GCAATCACTAACGCAA",7,209.64,10.8,-0.04,0.06,2.85,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAATCAGGTCTCACA",6,82.79,8.76,-2.07,0.06,2.94,1.08,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","GCAATCATATCACATA",13,2.58,NA,NA,NA,NA,NA,NA,"stop","Y35* K94W C150V R179Q",4
"lib2","SARS-CoV-2","GCAATCATGAAACTGG",6,21.41,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","V103S G117S F134D",3
"lib2","SARS-CoV-2","GCAATCCAACAATACC",1,27.24,9.29,-1.54,0.24,1.62,1.08,0.03,">1 nonsynonymous","I2V A89W S200V",3
"lib2","SARS-CoV-2","GCAATCCAATCCCGCG",6,46.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P149A Y165K",2
"lib2","SARS-CoV-2","GCAATCCATCCCACAA",4,107.62,7.21,-3.62,0.2,1.53,1.14,0.01,">1 nonsynonymous","C61G K128V Q168K F185I",4
"lib2","SARS-CoV-2","GCAATCCATGATATAA",8,0.34,NA,NA,NA,NA,NA,NA,"stop","G9* Y91V T100F Y119S Y175E T201Y",6
"lib2","SARS-CoV-2","GCAATCCCCTAATGTT",2,10.56,6.12,-4.71,1.23,1.5,1.28,0.04,">1 nonsynonymous","A81T F185N",2
"lib2","SARS-CoV-2","GCAATCCCTCGGTGAA",2,21.21,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","C6Q C49N R73S D90M C102L N107L L131M C158N",8
"lib2","SARS-CoV-2","GCAATCCGCACGTCCG",2,70.93,10.44,-0.39,0.04,2.95,1,0,">1 nonsynonymous","E10L T140L T201Q",3
"lib2","SARS-CoV-2","GCAATCCTGCCGCGCT",3,144.77,9.31,-1.53,0.03,2.95,1.06,0,">1 nonsynonymous","A42M K56V I138T T170N",4
"lib2","SARS-CoV-2","GCAATCCTTATTAGCC",9,100.79,6.04,-4.8,1.27,1.5,1.26,0.03,">1 nonsynonymous","I2L F8S A18M K26R Y91L",5
"lib2","SARS-CoV-2","GCAATCCTTCCCCTTG",13,79.91,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","Y50L K56T Y93N C150P",4
"lib2","SARS-CoV-2","GCAATCGAAACCTCAT",3,78.71,10.82,-0.01,0.05,2.93,1.08,0,">1 nonsynonymous","L5T H189Q",2
"lib2","SARS-CoV-2","GCAATCGAATATATCA",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V52N G116S",3
"lib2","SARS-CoV-2","GCAATCGAGTCAACAA",3,17.21,10.46,-0.38,0.08,2.9,1.06,0,"1 nonsynonymous","R27G",1
"lib2","SARS-CoV-2","GCAATCGCTATACCGT",1,36.91,10.84,0,0.06,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAATCGTAATACAGT",29,125.64,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C49T K56S R124Q",3
"lib2","SARS-CoV-2","GCAATCTAAAAAATCT",6,11.69,NA,NA,NA,NA,NA,NA,"stop","L5G T15* I28E P82R",4
"lib2","SARS-CoV-2","GCAATCTAAACGTTGC",6,92.25,10.99,0.15,0.06,2.96,1.05,0,"1 nonsynonymous","T85R",1
"lib2","SARS-CoV-2","GCAATCTAGTCGGGAT",5,26.26,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y50E L60N D90S K94E N120F P149L G172A A190F",8
"lib2","SARS-CoV-2","GCAATCTCAAACCACC",3,3.47,NA,NA,NA,NA,NA,NA,"stop","N13S S129R G152C V153*",4
"lib2","SARS-CoV-2","GCAATCTGAGTCCCCG",1,10.14,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","A14S F70E K128I",3
"lib2","SARS-CoV-2","GCAATCTGCGTAGTTG",4,41.96,10.72,-0.12,0.08,2.96,1.06,0,">1 nonsynonymous","I2Q L60R L122K S184L K199R",5
"lib2","SARS-CoV-2","GCAATCTTGAATCACG",2,0,NA,NA,NA,NA,NA,NA,"stop","R124* E154S L188R",3
"lib2","SARS-CoV-2","GCAATGAAAAACTGCG",1,13.75,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","A42K I104H N157C R179F",4
"lib2","SARS-CoV-2","GCAATGAAATATATTA",12,174.51,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N4M I28R V37D Y50S A81R L95V G166A",7
"lib2","SARS-CoV-2","GCAATGAACAATGATT",4,58.01,9.72,-1.11,0.1,1.81,1.09,0,">1 nonsynonymous","I28K T201A",2
"lib2","SARS-CoV-2","GCAATGAACCTCGAGG",6,135.85,9.7,-1.14,0.03,2.89,1.06,0,">1 nonsynonymous","S43L I138G G155D",3
"lib2","SARS-CoV-2","GCAATGAATGCGATCC",1,35.13,6.42,-4.41,0.27,1.5,1.05,0.01,">1 nonsynonymous","N64C K87H K114S N157I T201V",5
"lib2","SARS-CoV-2","GCAATGAATTCTTGGG",11,261.66,10.8,-0.03,0.05,2.91,1.09,0,">1 nonsynonymous","R16N F62Y T85R G196L",4
"lib2","SARS-CoV-2","GCAATGACAGAGGCAA",1,13.42,9.03,-1.81,0.19,1.5,1,0.02,">1 nonsynonymous","N64F A89R",2
"lib2","SARS-CoV-2","GCAATGACGGGTGCAT",5,1.68,NA,NA,NA,NA,NA,NA,"stop","C6R F12T A42* T55I F167Q",5
"lib2","SARS-CoV-2","GCAATGAGATAACACC",2,11.36,NA,NA,NA,NA,NA,0.3,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","GCAATGATATAAAGGA",5,19.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3I S36F L60C V103R F156R",5
"lib2","SARS-CoV-2","GCAATGATGCTCTTTA",6,63.09,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S41L P54T N107Y",3
"lib2","SARS-CoV-2","GCAATGATTAATCAAG",7,162.75,9.72,-1.11,0.05,2.31,1.06,0,">1 nonsynonymous","C6F Y178N",2
"lib2","SARS-CoV-2","GCAATGATTAATTATA",2,15.03,10.07,-0.77,0.14,2.5,1.04,0.01,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","GCAATGCAAGACCGAG",13,110.91,9.76,-1.07,0.05,2.07,1.05,0,"1 nonsynonymous","V11G",1
"lib2","SARS-CoV-2","GCAATGCCCGGGGTCC",5,41.89,8.7,-2.13,0.3,1.5,1,0.06,">1 nonsynonymous","L95F P149S",2
"lib2","SARS-CoV-2","GCAATGCGTTGGAGAA",1,21.63,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","G51T V71D G83P",3
"lib2","SARS-CoV-2","GCAATGCGTTTAATAC",3,40.09,10.83,-0.01,0.05,2.95,1.06,0,">1 nonsynonymous","L5Y T63R S129K",3
"lib2","SARS-CoV-2","GCAATGCTAACAATAA",7,33.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A67N G174R",2
"lib2","SARS-CoV-2","GCAATGCTGCATCTCT",1,19.69,10.81,-0.03,0.04,3,1,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","GCAATGCTGCCAGGAC",3,6.99,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P7T S53F V77L Q144L",4
"lib2","SARS-CoV-2","GCAATGTAAACACCAT",3,15.44,10.63,-0.21,0.1,2.87,1.08,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","GCAATGTAAACCTTAC",4,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F K128Y V173C",3
"lib2","SARS-CoV-2","GCAATGTCCCCGGGTC",4,13.43,6,-4.84,1.26,1.5,1.18,0.02,">1 nonsynonymous","L95Y V103D P197E",3
"lib2","SARS-CoV-2","GCAATGTCGATCCTAT",5,0.21,NA,NA,NA,NA,NA,NA,"stop","N13* S43H",2
"lib2","SARS-CoV-2","GCAATGTGAAATAGGG",14,253.29,10.56,-0.28,0.03,2.92,1.05,0,">1 nonsynonymous","G83R E141L",2
"lib2","SARS-CoV-2","GCAATGTGAACATAAA",1,118.6,10.17,-0.67,0.05,2.71,1.04,0,">1 nonsynonymous","S139I T201Q",2
"lib2","SARS-CoV-2","GCAATGTGATGCATAG",12,222.4,9.64,-1.19,0.04,2.86,1.04,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","GCAATGTGTGCCGTCG",8,1.13,NA,NA,NA,NA,NA,NA,"stop","S41Y K114* L131N Y165A",4
"lib2","SARS-CoV-2","GCAATTAAATGAATAA",2,6.34,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F99L D137T",2
"lib2","SARS-CoV-2","GCAATTAAGGGTGAAA",2,37.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88Y N118M L183I",3
"lib2","SARS-CoV-2","GCAATTACACCAAGCA",2,21.09,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","K48V R73Y W106V L162K G196W",5
"lib2","SARS-CoV-2","GCAATTAGAAAGCGTT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","S29M D137L P149*",3
"lib2","SARS-CoV-2","GCAATTAGTTTATCCA",7,0.11,NA,NA,NA,NA,NA,NA,"stop","K94* Y165H",2
"lib2","SARS-CoV-2","GCAATTATATAGCGAG",1,26.37,10.91,0.08,0.06,2.94,1.06,0,">1 nonsynonymous","L5W Q168F",2
"lib2","SARS-CoV-2","GCAATTATATTTTAAG",4,75.5,9.44,-1.39,0.06,2.84,1.11,0,">1 nonsynonymous","N120S T140L T170F",3
"lib2","SARS-CoV-2","GCAATTATCGCGCAAT",3,26.26,10.96,0.13,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAATTATTGTCGAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","E76Y Y93S I104* D137I Y143K R179K",6
"lib2","SARS-CoV-2","GCAATTCACAATTGCT",2,53.65,10.18,-0.66,0.03,2.95,1.04,0,"1 nonsynonymous","A145C",1
"lib2","SARS-CoV-2","GCAATTCACCATCGTA",12,71.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S N157L",2
"lib2","SARS-CoV-2","GCAATTCCCCGAAGCT",7,0.5,NA,NA,NA,NA,NA,NA,"stop","P96F E141*",2
"lib2","SARS-CoV-2","GCAATTCCTCAAAAAT",8,78.77,10.75,-0.08,0.04,2.96,1.03,0,"1 nonsynonymous","N64P",1
"lib2","SARS-CoV-2","GCAATTCGAAATGTAA",8,17.92,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","D68T W106Q V181A",3
"lib2","SARS-CoV-2","GCAATTCGCGGTCGAT",4,56.01,10.23,-0.61,0.07,2.8,1.14,0,">1 nonsynonymous","T15R Q144R",2
"lib2","SARS-CoV-2","GCAATTCTAAGACACA",5,167.38,10.2,-0.64,0.04,2.92,1.07,0,">1 nonsynonymous","S41D N64I E141S F156V",4
"lib2","SARS-CoV-2","GCAATTCTCCTCTTGA",4,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E C49K C61L Y119C",4
"lib2","SARS-CoV-2","GCAATTCTGAAGAATA",6,102.39,9.72,-1.12,0.08,2.13,1.03,0,">1 nonsynonymous","S36K I88M",2
"lib2","SARS-CoV-2","GCAATTGGGTTAGAAT",2,38.08,10.09,-0.74,0.07,2.61,1.12,0,">1 nonsynonymous","A33D L188M",2
"lib2","SARS-CoV-2","GCAATTGTGAGAGAGT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","R25F S45* Y91M L125R",4
"lib2","SARS-CoV-2","GCAATTTAAGCGTTTA",10,8.46,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K87L V103W K132L V173E L183N",5
"lib2","SARS-CoV-2","GCAATTTAAGTCACTA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","C6R G116P R124A E141P K198*",5
"lib2","SARS-CoV-2","GCAATTTACTTTATCA",3,104.31,10.33,-0.51,0.06,2.81,1.04,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","GCAATTTGTGAACAGG",1,6.99,9.89,-0.95,0.13,2.76,1,0,">1 nonsynonymous","I28L G83N I88L",3
"lib2","SARS-CoV-2","GCAATTTTGATCATGA",1,26.9,10.45,-0.38,0.05,3,1,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","GCACAAAAAATGAGAT",5,33.35,9.91,-0.93,0.1,2.17,1.02,0,">1 nonsynonymous","Y35E G51K",2
"lib2","SARS-CoV-2","GCACAAAAAGTGTTGG",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G G86V K87N",3
"lib2","SARS-CoV-2","GCACAAAACACTAATT",2,33.38,10.47,-0.37,0.06,2.88,1.08,0,">1 nonsynonymous","P7L F160S",2
"lib2","SARS-CoV-2","GCACAAAATTTTATTT",2,16.72,9.77,-1.07,0.2,1.81,1.17,0.02,">1 nonsynonymous","C61Y D98C Y178A T201W",4
"lib2","SARS-CoV-2","GCACAAACCTACGGAT",4,91.1,10.65,-0.18,0.02,2.93,1.08,0,">1 nonsynonymous","K87Y P149H",2
"lib2","SARS-CoV-2","GCACAAACGCCCTTAT",1,12.9,6.43,-4.41,0.68,1.5,1.19,0.05,">1 nonsynonymous","I2Y D97F N107S G152Y",4
"lib2","SARS-CoV-2","GCACAAAGCCTCTAAT",5,6.8,6,-4.84,2,3,1.39,0.03,">1 nonsynonymous","A89Q V103P",2
"lib2","SARS-CoV-2","GCACAAAGTAAAAACT",5,85.11,10.18,-0.66,0.04,2.93,1.02,0,">1 nonsynonymous","Y35S G174N",2
"lib2","SARS-CoV-2","GCACAAATGAACGACT",4,71.66,8.88,-1.96,0.15,1.53,1.14,0.01,">1 nonsynonymous","L38K F134S P197Q",3
"lib2","SARS-CoV-2","GCACAACAAAACAGGT",30,12.98,NA,NA,NA,NA,NA,NA,"stop","I28W S45F L57* E76G Y119M",5
"lib2","SARS-CoV-2","GCACAACAATGCACAG",6,10.84,NA,NA,NA,NA,NA,NA,"stop","V37L A42Y F160* K198T",4
"lib2","SARS-CoV-2","GCACAACACATCGTTA",18,299.13,10.82,-0.02,0.05,2.9,1.09,0,">1 nonsynonymous","S43D S200P",2
"lib2","SARS-CoV-2","GCACAACACCGTGAGC",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76W C150V P161N",3
"lib2","SARS-CoV-2","GCACAACATGCTAGTC",1,8.56,10.18,-0.66,0.25,2.01,1.05,0.04,">1 nonsynonymous","Y91R P133A T201G",3
"lib2","SARS-CoV-2","GCACAACATTGTACGT",5,14.14,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F12Y F17V C49N L131G",4
"lib2","SARS-CoV-2","GCACAACCATCTCAAA",9,91.75,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N4L T55Q C150E",3
"lib2","SARS-CoV-2","GCACAACCCCTGAGAA",8,3.55,NA,NA,NA,NA,NA,NA,"stop","K48N V65* I88M G116R",4
"lib2","SARS-CoV-2","GCACAACCCGCCACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40D T55*",2
"lib2","SARS-CoV-2","GCACAACCTATATGCA",12,159.94,10.68,-0.15,0.04,2.87,1.11,0,">1 nonsynonymous","L60S T85R",2
"lib2","SARS-CoV-2","GCACAAGACTATACGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y E135R",2
"lib2","SARS-CoV-2","GCACAAGACTCTTCTA",2,73.72,10.12,-0.72,0.03,2.85,1.11,0,">1 nonsynonymous","K56R G152P",2
"lib2","SARS-CoV-2","GCACAAGATAATTTAT",1,86.85,10.84,0,0.04,2.95,1.07,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","GCACAAGATGGACTAC",9,43.19,8.72,-2.12,0.19,1.5,1.11,0.02,">1 nonsynonymous","Y35S V77R S139T",3
"lib2","SARS-CoV-2","GCACAAGCAGGGTGTG",1,65.27,8.59,-2.25,0.1,2.49,1.09,0,">1 nonsynonymous","Y35K Y119A Q163H",3
"lib2","SARS-CoV-2","GCACAAGCCACAGAAT",1,6.31,11.02,0.19,0.45,2.67,1,0.02,">1 nonsynonymous","L5E Q176R",2
"lib2","SARS-CoV-2","GCACAAGCCTTTATAT",5,39.98,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","E10A F99R",2
"lib2","SARS-CoV-2","GCACAAGCTAGTGAGT",8,124.47,10.05,-0.79,0.03,2.95,1.05,0,">1 nonsynonymous","G9A V32S K56T K87T G116N K132R",6
"lib2","SARS-CoV-2","GCACAAGGTAGTAAGT",11,154.51,9.71,-1.12,0.05,2.76,1.07,0,">1 nonsynonymous","A14T K132M T170S",3
"lib2","SARS-CoV-2","GCACAAGTCCTGAAAC",18,257.68,10.58,-0.25,0.03,2.92,1.06,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","GCACAAGTTGTCAACG",3,7.35,10.34,-0.5,0.12,2.84,1.09,0.01,">1 nonsynonymous","L5M P54A",2
"lib2","SARS-CoV-2","GCACAATAATCGGCAT",8,43.59,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D98M W106R L131K",3
"lib2","SARS-CoV-2","GCACAATACCGGGTTC",3,58.97,10.77,-0.07,0.07,2.95,1.06,0,"1 nonsynonymous","D98K",1
"lib2","SARS-CoV-2","GCACAATAGCACACGG",1,8.14,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G83W K87D P96R F185T",4
"lib2","SARS-CoV-2","GCACAATGCATATTCT",9,210.28,8.63,-2.2,0.08,2.59,1.14,0,">1 nonsynonymous","P54D T100F G166W",3
"lib2","SARS-CoV-2","GCACAATGTTCTAGTT",3,41.23,10.35,-0.48,0.08,2.91,1.11,0,">1 nonsynonymous","F156A S184N",2
"lib2","SARS-CoV-2","GCACACAAATCCACTT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","S139H G155* F167P G174N",4
"lib2","SARS-CoV-2","GCACACAAGATGAGGA",5,100.25,10.17,-0.67,0.06,2.68,1.03,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","GCACACAATGTGAGAG",2,83.25,10.76,-0.08,0.01,2.97,1.04,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","GCACACACCGGAATAG",1,15.84,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","Y50C G86T G101W",3
"lib2","SARS-CoV-2","GCACACAGGACCATAA",23,247,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W106D N120T R127V F167Y",4
"lib2","SARS-CoV-2","GCACACAGGTACGAAA",1,8,7.55,-3.28,0.5,1.5,1.14,0.07,">1 nonsynonymous","I2H R136L G146M",3
"lib2","SARS-CoV-2","GCACACATATAGACTA",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q I88M W106S P133L",4
"lib2","SARS-CoV-2","GCACACCAAATAAGAC",5,73.24,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y66R S113M K199T",3
"lib2","SARS-CoV-2","GCACACCACTCCAGTT",6,58.93,8.73,-2.1,0.08,2.6,1.06,0,">1 nonsynonymous","V52A S164D",2
"lib2","SARS-CoV-2","GCACACCACTCCCTAC",4,108.58,10.86,0.03,0.06,2.85,1.15,0,">1 nonsynonymous","I2H D90A P197L",3
"lib2","SARS-CoV-2","GCACACCGATTGAGGC",3,31.96,10.71,-0.13,0.07,3,1.03,0,">1 nonsynonymous","K132T F160N",2
"lib2","SARS-CoV-2","GCACACCTACTGAGCA",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P R78A W106R T201F",4
"lib2","SARS-CoV-2","GCACACCTCTCTTTAA",3,45.94,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","V32K D137K P169N N171K",4
"lib2","SARS-CoV-2","GCACACCTTTCCACGT",2,10.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I104N Y123S F156S",3
"lib2","SARS-CoV-2","GCACACGACCGAAATG",4,27.4,10.64,-0.2,0.06,2.95,1.06,0,">1 nonsynonymous","P7T R78S",2
"lib2","SARS-CoV-2","GCACACGATCAACAAG",3,33.44,10.9,0.07,0.06,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GCACACGCCACAGCAG",2,31.32,10.9,0.06,0.08,3,1.02,0,">1 nonsynonymous","G9D N110W",2
"lib2","SARS-CoV-2","GCACACGCGGGACGTC",5,22.71,9.01,-1.82,0.23,1.66,1.04,0.03,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","GCACACGTTGTACCTA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCACACTAATCAATGA",10,54.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44I C102D K128V Y143G T201F",5
"lib2","SARS-CoV-2","GCACACTGACTGTTAA",5,66.74,8.44,-2.39,0.08,2.52,1.08,0,">1 nonsynonymous","A42W S53F Y119Q P149V",4
"lib2","SARS-CoV-2","GCACAGAAAAAAGCAA",9,39.33,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y50S N92Y P133T",3
"lib2","SARS-CoV-2","GCACAGAAATGATCGT",12,240.26,10.94,0.1,0.04,2.94,1.06,0,">1 nonsynonymous","N58R T85R L122K",3
"lib2","SARS-CoV-2","GCACAGAAGAAGCCAC",14,65.25,9.54,-1.3,0.23,1.5,1.03,0.03,">1 nonsynonymous","T15N D90V Q163L",3
"lib2","SARS-CoV-2","GCACAGAATACTAATT",10,157.93,10.15,-0.68,0.07,2.59,1.03,0,">1 nonsynonymous","T55Y Y91R",2
"lib2","SARS-CoV-2","GCACAGACACCTTAAT",4,6.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57T F70I T85G K94S T201R",5
"lib2","SARS-CoV-2","GCACAGACTGAACCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","R27A T55* Q79V A89P W106S",5
"lib2","SARS-CoV-2","GCACAGAGATCTAGAT",3,4.26,NA,NA,NA,NA,NA,NA,"stop","L95* K199W",2
"lib2","SARS-CoV-2","GCACAGATTTATAACA",8,60.36,9.2,-1.63,0.06,2.02,1.08,0,">1 nonsynonymous","N107S Q144R P149K",3
"lib2","SARS-CoV-2","GCACAGCTAACATGAA",2,32.4,9.67,-1.16,0.08,2.51,1.07,0,">1 nonsynonymous","A14I T148P",2
"lib2","SARS-CoV-2","GCACAGCTAAGACTTA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","T3P R78G D112* Y119M V180R",5
"lib2","SARS-CoV-2","GCACAGGAATTGACGA",8,212.53,10.81,-0.03,0.05,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACAGGTAAAGATCT",2,20.69,8.65,-2.18,0.13,1.57,1.02,0.01,">1 nonsynonymous","L95C Q176W",2
"lib2","SARS-CoV-2","GCACAGTGTTGCCGTA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","L111*",1
"lib2","SARS-CoV-2","GCACATAACTACCGAA",1,0.8,NA,NA,NA,NA,NA,NA,"stop","V20L R27D Y143* Q168K",4
"lib2","SARS-CoV-2","GCACATAATAATCTCT",7,25.92,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","D97G N157I",2
"lib2","SARS-CoV-2","GCACATAATCCTACAT",3,38.76,10.77,-0.06,0.04,2.92,1.11,0,">1 nonsynonymous","T46L T201L",2
"lib2","SARS-CoV-2","GCACATACTTTGTTCC",6,0.23,NA,NA,NA,NA,NA,NA,"stop","D68K A105* L122W T170S",4
"lib2","SARS-CoV-2","GCACATAGCCAGGAAT",14,162.56,9.42,-1.42,0.11,1.7,1.12,0,">1 nonsynonymous","T63A K94L",2
"lib2","SARS-CoV-2","GCACATAGCCTACAGA",3,71.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14D S36K T55G D68T D112A T201F",6
"lib2","SARS-CoV-2","GCACATATAAACCGTT",1,1.59,NA,NA,NA,NA,NA,NA,"stop","G74L P149*",2
"lib2","SARS-CoV-2","GCACATATAAGTAGTA",14,60.7,8.07,-2.76,0.12,1.65,1.16,0,">1 nonsynonymous","S45F Q84W K87N S129M S184T",5
"lib2","SARS-CoV-2","GCACATATAAGTATAA",6,54.78,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","P177R",1
"lib2","SARS-CoV-2","GCACATATATAACCTG",2,12.4,10.51,-0.33,0.12,2.75,1.21,0.01,">1 nonsynonymous","L5Q D34R",2
"lib2","SARS-CoV-2","GCACATATCTATCTCT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCACATATTAGGGGGG",6,36.8,10.53,-0.31,0.06,2.99,1.01,0,">1 nonsynonymous","V37Y T85D",2
"lib2","SARS-CoV-2","GCACATCATTGTAACT",7,122.25,10.06,-0.78,0.05,2.39,1.09,0,">1 nonsynonymous","T46S D98L T140V",3
"lib2","SARS-CoV-2","GCACATCCATTTGCCC",3,18.2,6.92,-3.92,0.46,1.5,1.13,0.03,">1 nonsynonymous","W106T N157T",2
"lib2","SARS-CoV-2","GCACATCGATCATGGA",17,251.33,9.9,-0.93,0.06,2.08,1.05,0,"1 nonsynonymous","F99H",1
"lib2","SARS-CoV-2","GCACATGACACCCTAG",8,148.55,9.63,-1.21,0.07,2.43,1.03,0,">1 nonsynonymous","Y121L V180L S200V",3
"lib2","SARS-CoV-2","GCACATGATACACGGG",9,177.06,10.12,-0.72,0.06,2.66,1.05,0,">1 nonsynonymous","I104V F134T",2
"lib2","SARS-CoV-2","GCACATGATCTTCTAA",1,6.33,8.06,-2.77,0.15,2.79,1.07,0.01,">1 nonsynonymous","K114G G174V",2
"lib2","SARS-CoV-2","GCACATGCAAGTAACA",3,114.55,10.88,0.04,0.07,2.91,1.11,0,">1 nonsynonymous","K56L P197A",2
"lib2","SARS-CoV-2","GCACATGCGCCAACTA",4,14,6.6,-4.23,0.76,3,1.1,0.01,">1 nonsynonymous","L122P G146S N151T",3
"lib2","SARS-CoV-2","GCACATGCTCCGTGAA",4,33.73,10.76,-0.08,0.05,2.96,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACATGTGCAATTAG",1,31.78,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10T T15G L38Q R73V N92D",5
"lib2","SARS-CoV-2","GCACATGTGTATAGTA",3,7.54,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","C61S V103L N120T",3
"lib2","SARS-CoV-2","GCACATTAAAAAGAGG",4,0,NA,NA,NA,NA,NA,NA,"stop","C6G V77G L95Q E154*",4
"lib2","SARS-CoV-2","GCACATTAAATAAAAA",12,118.59,10.67,-0.16,0.04,2.95,1.07,0,">1 nonsynonymous","I2E G9P",2
"lib2","SARS-CoV-2","GCACATTAGCGAACAA",11,111.47,9.6,-1.23,0.08,2.12,1.1,0,">1 nonsynonymous","C6R N13S",2
"lib2","SARS-CoV-2","GCACATTATTGCTACA",7,28.78,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I2P R27L T55R G86K C158G",5
"lib2","SARS-CoV-2","GCACATTCGACAATAA",4,30.67,10.85,0.02,0.07,3,1.02,0,"1 nonsynonymous","F44Y",1
"lib2","SARS-CoV-2","GCACATTCGACATAAA",4,37.63,8.3,-2.53,0.29,1.5,1.15,0.02,">1 nonsynonymous","R27Y S41C P96C",3
"lib2","SARS-CoV-2","GCACATTCGACCCAAT",3,8.01,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","V103R N120P Q144A",3
"lib2","SARS-CoV-2","GCACCAAAACTAGAAT",4,1.08,NA,NA,NA,NA,NA,NA,"stop","A42C D90T S113* F134Y",4
"lib2","SARS-CoV-2","GCACCAAAAGCCGCGG",6,36.26,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5N T15F N58R A89N Y165P G174T",6
"lib2","SARS-CoV-2","GCACCAAAATGAAAAG",2,25.96,9.66,-1.18,0.1,1.87,1.04,0,">1 nonsynonymous","F17P S43G L122I",3
"lib2","SARS-CoV-2","GCACCAAACATAGAGG",3,13.18,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90P C150S",2
"lib2","SARS-CoV-2","GCACCAACAAAAAAAG",1,5.97,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","GCACCAACCCTAAAAT",1,23.16,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A18W S53H G166F V180G",4
"lib2","SARS-CoV-2","GCACCAACCCTAGTAA",3,17.06,6.89,-3.95,0.72,1.5,1.21,0.07,">1 nonsynonymous","V37L R73G Y91K V115S",4
"lib2","SARS-CoV-2","GCACCAAGCGCATGAT",5,59.78,10.44,-0.4,0.06,2.95,1.07,0,">1 nonsynonymous","V65L K87M",2
"lib2","SARS-CoV-2","GCACCAAGCGCTACGC",7,91.59,9.95,-0.89,0.04,2.82,1.07,0,">1 nonsynonymous","N40A V173P A190T",3
"lib2","SARS-CoV-2","GCACCAAGGCTTCCAA",18,105.36,6.29,-4.55,0.51,1.5,1.19,0.01,">1 nonsynonymous","N13L L60R I142N",3
"lib2","SARS-CoV-2","GCACCACAAATGAACA",2,4.75,NA,NA,NA,NA,NA,NA,"stop","G116Q Y119*",2
"lib2","SARS-CoV-2","GCACCACAACACACCA",1,14.9,11.02,0.19,0.07,3,1.01,0,">1 nonsynonymous","N130K T201L",2
"lib2","SARS-CoV-2","GCACCACCACTTGACC",9,182.19,10.77,-0.07,0.07,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACCACCCACAAATG",7,0,NA,NA,NA,NA,NA,NA,"stop","K26* R27K A89S D97M Y121T R127S",6
"lib2","SARS-CoV-2","GCACCACGAAGTCTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T T15C A42Y Y121S G166I",5
"lib2","SARS-CoV-2","GCACCACGATGAACTT",8,80.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A42G F47S G86R N92P N130C",5
"lib2","SARS-CoV-2","GCACCACGTACTAGCA",1,26.55,10.19,-0.65,0.06,2.94,1,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","GCACCACGTCCTCCCA",2,9.97,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","Y50N L57C F99S L162P L187S",5
"lib2","SARS-CoV-2","GCACCACTGATGAAGT",2,89.01,9.07,-1.76,0.19,1.53,1.04,0.02,">1 nonsynonymous","Y35E Y121N",2
"lib2","SARS-CoV-2","GCACCAGATACATCAT",4,1.81,NA,NA,NA,NA,NA,NA,"stop","K56E T140* S184C",3
"lib2","SARS-CoV-2","GCACCAGATCTTGATG",4,5.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A33T V103L",2
"lib2","SARS-CoV-2","GCACCAGCCTGTGTGG",3,26.31,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D59L S69K P149H F156S",4
"lib2","SARS-CoV-2","GCACCAGGAGCACTTT",1,38.88,10.29,-0.55,0.08,2.61,1.08,0,">1 nonsynonymous","N1K S36Y G116Q",3
"lib2","SARS-CoV-2","GCACCAGGCCCCCCAC",5,57.33,9.46,-1.38,0.12,1.78,1.11,0.01,">1 nonsynonymous","C31F V52S",2
"lib2","SARS-CoV-2","GCACCAGGTTAATGAT",1,8.98,8.54,-2.29,0.5,1.5,1.3,0.06,">1 nonsynonymous","K56Y N107V",2
"lib2","SARS-CoV-2","GCACCAGTAACCACAC",4,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V L111S",2
"lib2","SARS-CoV-2","GCACCAGTATTGTTTT",6,54.7,10.08,-0.76,0.08,2.29,1.05,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","GCACCATAACACCAAG",20,174.18,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4D T15L L38H Y93P D97S",5
"lib2","SARS-CoV-2","GCACCATAACAGTTAG",4,77.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W106E Q176H",2
"lib2","SARS-CoV-2","GCACCATAATACTGAA",4,71.74,10.63,-0.21,0.07,2.88,1.09,0,"1 nonsynonymous","N109I",1
"lib2","SARS-CoV-2","GCACCATAATCCCAAG",1,31.14,9.77,-1.07,0.09,2.73,1.17,0,">1 nonsynonymous","L60M Y121S",2
"lib2","SARS-CoV-2","GCACCATCGACTAACA",1,26.56,10.69,-0.14,0.05,3,1.03,0,">1 nonsynonymous","N24S V32L V115L",3
"lib2","SARS-CoV-2","GCACCATGAACCCCGA",3,55.44,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G86F K114R Y121M",3
"lib2","SARS-CoV-2","GCACCATTCACATCGC",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46P L162T G174T",3
"lib2","SARS-CoV-2","GCACCATTTCATCGAA",6,161.74,8.81,-2.03,0.07,2.88,1.05,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","GCACCCAGAGTGGTCC",11,152.74,9.01,-1.83,0.09,2.12,1.09,0,">1 nonsynonymous","D59K D112L",2
"lib2","SARS-CoV-2","GCACCCATCACCCGAA",6,69.66,6.19,-4.65,0.76,1.5,1.29,0.02,"1 nonsynonymous","G101Y",1
"lib2","SARS-CoV-2","GCACCCCAATTGCCTG",9,81.46,10.78,-0.06,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACCCCTAGAAATGG",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I V65A C102R R127F",4
"lib2","SARS-CoV-2","GCACCCTCGACACGTT",6,52.52,10.82,-0.01,0.11,2.87,1.04,0,">1 nonsynonymous","S43I K114N N130K",3
"lib2","SARS-CoV-2","GCACCCTTACTAAAAA",4,11.8,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V181R S200D",2
"lib2","SARS-CoV-2","GCACCGAAACAACCAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28E K56A I80G",3
"lib2","SARS-CoV-2","GCACCGAAGTATGTAA",1,58.69,10.76,-0.08,0.07,2.88,1.08,0,"1 nonsynonymous","V173D",1
"lib2","SARS-CoV-2","GCACCGAAGTGAAAAT",5,106.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I142V P177Q V182I",3
"lib2","SARS-CoV-2","GCACCGAATGAACATT",3,61.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F47Y A89D Y165K",3
"lib2","SARS-CoV-2","GCACCGAATTCCTAAA",7,40.4,7.72,-3.12,0.42,1.5,1.12,0.06,">1 nonsynonymous","N4M F12G F47I K56A",4
"lib2","SARS-CoV-2","GCACCGACCATAAAAT",4,12.73,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","W23K S43R P177V",3
"lib2","SARS-CoV-2","GCACCGATTCCGAGAC",6,33.76,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A22S S69F C150I Q168A",4
"lib2","SARS-CoV-2","GCACCGATTGTCAGGG",1,11.79,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I2P E10L L38V G51S Q84T N120F V180K",7
"lib2","SARS-CoV-2","GCACCGCAGCATCCTT",5,26.49,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P7Q Y93T N120L V181A",4
"lib2","SARS-CoV-2","GCACCGCTCAGCTCAT",2,0.07,NA,NA,NA,NA,NA,NA,"stop","K56F G86T A145T T201*",4
"lib2","SARS-CoV-2","GCACCGCTGAAGTCAG",5,62.13,10.71,-0.13,0.09,2.73,1.11,0,"1 nonsynonymous","A190I",1
"lib2","SARS-CoV-2","GCACCGGGCTACGTTC",1,5.73,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N92M V115Q S129R",3
"lib2","SARS-CoV-2","GCACCGGGGAAACCTA",3,73.79,10.51,-0.33,0.06,2.87,1.12,0,">1 nonsynonymous","L60M G116V S129K T201M",4
"lib2","SARS-CoV-2","GCACCGGTTTCATTAA",1,15.62,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y21S C31W I88D",3
"lib2","SARS-CoV-2","GCACCGTAAAGAAATT",3,236.18,10.38,-0.45,0.03,2.92,1.02,0,">1 nonsynonymous","T46L S53F",2
"lib2","SARS-CoV-2","GCACCGTAAAGGACAC",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48P I72N",2
"lib2","SARS-CoV-2","GCACCGTAACAGAGCT",15,122.07,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F8I N24P K87M G101P R124L",5
"lib2","SARS-CoV-2","GCACCGTAGTTGCTAG",13,74.43,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","L38K D68L Q84D L95A W106G G116Y",6
"lib2","SARS-CoV-2","GCACCTAAAGCGTATA",22,116.66,6,-4.84,1.21,1.5,1.23,0.01,">1 nonsynonymous","A22L D68E N109Y Y143F",4
"lib2","SARS-CoV-2","GCACCTACTAGATACA",8,18.69,10.62,-0.21,0.15,2.86,1.13,0.01,"1 nonsynonymous","N40R",1
"lib2","SARS-CoV-2","GCACCTAGAACAAGGG",6,31.36,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G9E R27K I88G I142Q Q168M",5
"lib2","SARS-CoV-2","GCACCTAGTGTCACAT",7,99.84,10.63,-0.2,0.04,2.85,1.05,0,"1 nonsynonymous","N58M",1
"lib2","SARS-CoV-2","GCACCTATCAATAAGC",2,0.74,NA,NA,NA,NA,NA,NA,"stop","C61Q D98* F126I G146E",4
"lib2","SARS-CoV-2","GCACCTATCCCACTAG",5,2.8,NA,NA,NA,NA,NA,NA,"stop","N13K G51* I104G N157D G166C",5
"lib2","SARS-CoV-2","GCACCTATTCCTAGTC",31,209.39,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T63F G86L N110L G117L L125Q I142A T148L G155T",8
"lib2","SARS-CoV-2","GCACCTCAATATCCCG",2,61.4,10.84,0.01,0.07,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GCACCTCATCTCCAAT",2,14.46,6,-4.84,2,3,1.11,0,">1 nonsynonymous","K26V D112M P177A A190S",4
"lib2","SARS-CoV-2","GCACCTCCGAGAAATC",3,33.74,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F12S S19K D97W",3
"lib2","SARS-CoV-2","GCACCTCGCCAAAAAC",3,21.43,9.45,-1.39,0.21,1.5,1,0.03,">1 nonsynonymous","F12L A67F G83Y I104V K132L I138M",6
"lib2","SARS-CoV-2","GCACCTCTCGGTAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y V77G",2
"lib2","SARS-CoV-2","GCACCTCTCTCGAAAC",5,1.69,NA,NA,NA,NA,NA,NA,"stop","D34R A42R Y66R D75T P82* S139R",6
"lib2","SARS-CoV-2","GCACCTCTTCTTATCA",2,1.94,NA,NA,NA,NA,NA,NA,"stop","I2V S43V G86* L122T",4
"lib2","SARS-CoV-2","GCACCTGAATGTATAT",6,124.71,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14V R25C L38Q H189N",4
"lib2","SARS-CoV-2","GCACCTGCCTAATCGT",8,51.84,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","K56N G74T D112A R127L A145K T201Q",6
"lib2","SARS-CoV-2","GCACCTGTACTAGAAC",3,66.3,9.88,-0.96,0.07,2.1,1.06,0,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","GCACCTTAACCAACCT",6,46.41,10.75,-0.08,0.02,2.96,1.03,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","GCACCTTACACCAGTT",20,139.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H V77M",2
"lib2","SARS-CoV-2","GCACCTTCGCATGATA",2,26.82,8.61,-2.22,0.39,1.5,1,0.06,">1 nonsynonymous","D68L Y93L N118Y",3
"lib2","SARS-CoV-2","GCACCTTGATCACGTT",9,105.95,9.64,-1.2,0.08,1.94,1.08,0,">1 nonsynonymous","N1C V77M D98T T148S",4
"lib2","SARS-CoV-2","GCACCTTGCTGAGCCT",2,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8K A14R C61A G83R",4
"lib2","SARS-CoV-2","GCACCTTGGCGATTTG",4,234.16,10.25,-0.59,0.03,2.84,1.03,0,">1 nonsynonymous","A42E T46Y W106T S139T",4
"lib2","SARS-CoV-2","GCACGAAAAATCCGTG",5,30.59,9.89,-0.94,0.09,2.11,1.07,0,">1 nonsynonymous","T15L S36K D98Y",3
"lib2","SARS-CoV-2","GCACGAAAAGTAGTTC",12,72.86,6.69,-4.15,0.26,1.5,1.11,0.01,">1 nonsynonymous","L95Q V115L",2
"lib2","SARS-CoV-2","GCACGAAAATAGTAAC",4,41.89,7.86,-2.98,0.34,1.5,1.1,0.05,">1 nonsynonymous","N64L G83C F99L",3
"lib2","SARS-CoV-2","GCACGAAAGGTAAACA",5,61.19,10.55,-0.29,0.05,2.95,1.06,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","GCACGAAATAAGCACA",1,62.43,9.54,-1.3,0.06,2.91,1.03,0,">1 nonsynonymous","K87D K128G",2
"lib2","SARS-CoV-2","GCACGAACCCCAGACA",1,11.34,10.66,-0.17,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACGAACCGCTTATA",1,22.54,10.24,-0.6,0.08,2.73,1.15,0,"1 nonsynonymous","L57H",1
"lib2","SARS-CoV-2","GCACGAACGAGGATAG",3,10.45,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","V20A I88K T100V L162G T201S",5
"lib2","SARS-CoV-2","GCACGAAGACACGCGT",6,3.99,NA,NA,NA,NA,NA,NA,"stop","A18* R25K S41T F99D N118T G146A",6
"lib2","SARS-CoV-2","GCACGAAGCCCTACCC",1,27.62,6,-4.84,1.65,3,1.18,0,">1 nonsynonymous","P161K T201G",2
"lib2","SARS-CoV-2","GCACGAATAATTGAAT",1,0.34,NA,NA,NA,NA,NA,NA,"stop","K26R G51M G83* G117Y",4
"lib2","SARS-CoV-2","GCACGAATACTTGAAA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","L5* Y39E S45C K87M",4
"lib2","SARS-CoV-2","GCACGAATCAAGCTGT",6,64.77,9.96,-0.88,0.05,2.69,1.05,0,">1 nonsynonymous","Y35E P54N",2
"lib2","SARS-CoV-2","GCACGACAAACAGCCT",13,3.05,NA,NA,NA,NA,NA,NA,"stop","F44T K132L C150*",3
"lib2","SARS-CoV-2","GCACGACGATGCAATA",3,0,NA,NA,NA,NA,NA,NA,"stop","D59* C150E F156Y L188S T201E",5
"lib2","SARS-CoV-2","GCACGAGAAAATACAA",13,68.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V32W N58G Y123I R179L",4
"lib2","SARS-CoV-2","GCACGAGCAAAAAGAC",6,6.4,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib2","SARS-CoV-2","GCACGAGGCGAAAGCC",4,68.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L38N T85R L95C E135S",4
"lib2","SARS-CoV-2","GCACGAGTAAATATCT",3,51.22,10.8,-0.04,0.06,2.93,1.1,0,">1 nonsynonymous","N64T S113A A190V",3
"lib2","SARS-CoV-2","GCACGAGTTTAAGATC",1,35.76,10.61,-0.23,0.04,3,1.02,0,">1 nonsynonymous","N58R T63S T85S",3
"lib2","SARS-CoV-2","GCACGATACTTTAACT",7,23.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F70S T140D Y175S",3
"lib2","SARS-CoV-2","GCACGATATGGGATGG",10,63.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7F V180G F185L",3
"lib2","SARS-CoV-2","GCACGCAAACATGAGT",5,140.99,10.6,-0.23,0.06,2.93,1.04,0,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","GCACGCAAACCCAAAG",3,21.29,10.77,-0.07,0.07,2.99,1.01,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GCACGCAAATTCATCC",4,42.56,8.21,-2.63,0.16,2.07,1,0.01,">1 nonsynonymous","Y66F S113M N130Q T148I K198V",5
"lib2","SARS-CoV-2","GCACGCAAGACATGGC",5,52.55,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N4T G74K N120Y R127L T201Y",5
"lib2","SARS-CoV-2","GCACGCAATATTGCAC",4,47.11,8.9,-1.94,0.12,2.21,1.1,0.01,">1 nonsynonymous","L60V P149L P161S",3
"lib2","SARS-CoV-2","GCACGCAGAAAAAATT",5,64.24,10.86,0.02,0.05,2.88,1.11,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GCACGCAGACAAGGAG",9,64.82,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I88R R136M",2
"lib2","SARS-CoV-2","GCACGCATAAAAGGTA",9,159.01,9.69,-1.14,0.02,2.9,1.07,0,">1 nonsynonymous","S129H Q168S G174L",3
"lib2","SARS-CoV-2","GCACGCATACCATGGA",7,46.56,10.1,-0.74,0.07,2.69,1.06,0,">1 nonsynonymous","V37L F47V A105H",3
"lib2","SARS-CoV-2","GCACGCATGACAGATC",7,44.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I88M S108C",2
"lib2","SARS-CoV-2","GCACGCGAACTAAAAG",6,22.2,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","V77P P82F R127L N151F G155C",5
"lib2","SARS-CoV-2","GCACGCGAATAACACC",4,12.46,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A42L Q84V F99A",3
"lib2","SARS-CoV-2","GCACGCGACCACGCTA",4,25.66,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","T15C I80G V103T R124A P149K",5
"lib2","SARS-CoV-2","GCACGGAAATTTGATC",3,8.07,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N13I A42G V65I A89L",4
"lib2","SARS-CoV-2","GCACGGATATAATGTA",1,61.08,10.41,-0.43,0.06,2.89,1.11,0,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","GCACGGATTCACAATA",7,46.97,10.92,0.08,0.05,2.9,1.1,0,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","GCACGGCAAAGTTGAG",1,14.39,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C6F Y39F T55M C61L N118H K132F N171I C195Y",8
"lib2","SARS-CoV-2","GCACGGGGTATAGAAA",1,6.04,7.92,-2.91,0.45,2.02,1.26,0.02,">1 nonsynonymous","T3Y S41P S108N",3
"lib2","SARS-CoV-2","GCACGGTAAATTCACC",4,121.73,8.17,-2.67,0.14,2.46,1.07,0.01,">1 nonsynonymous","L122S P149T N157P S200I",4
"lib2","SARS-CoV-2","GCACGGTACAGTACTG",1,19.74,10.71,-0.12,0.03,2.98,1.04,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","GCACGGTTACAACTTT",4,34.33,6.98,-3.86,0.39,1.5,1.16,0.03,">1 nonsynonymous","G86R R127E",2
"lib2","SARS-CoV-2","GCACGGTTCGCCAAAC",2,13.21,9.92,-0.92,0.14,2.15,1,0.02,">1 nonsynonymous","S36E W106C",2
"lib2","SARS-CoV-2","GCACGGTTGTTCCCCG",12,107.96,10.85,0.01,0.04,2.92,1.08,0,">1 nonsynonymous","R16I Y39Q",2
"lib2","SARS-CoV-2","GCACGTAAACAACTAA",5,82.33,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L57G S113L",2
"lib2","SARS-CoV-2","GCACGTAAAGAGCCAT",13,74.72,10.71,-0.13,0.04,2.94,1.07,0,"1 nonsynonymous","A33C",1
"lib2","SARS-CoV-2","GCACGTAATGTGATTT",6,43.11,9.18,-1.66,0.17,1.5,1.03,0.01,">1 nonsynonymous","C49V G116T G196S",3
"lib2","SARS-CoV-2","GCACGTACCATCACCA",3,74.24,9.91,-0.93,0.08,2.44,1.05,0,">1 nonsynonymous","G51S D59A K114L",3
"lib2","SARS-CoV-2","GCACGTACCGCAAGTT",1,25.29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G74L R127F S139T",3
"lib2","SARS-CoV-2","GCACGTAGAGTAGACC",5,71.85,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","Y119V S139N F167S H189Y",4
"lib2","SARS-CoV-2","GCACGTCAAAACGAAA",16,240.27,10.64,-0.19,0.03,2.93,1.07,0,">1 nonsynonymous","V37Y K48V K198Q",3
"lib2","SARS-CoV-2","GCACGTCAAACAATCC",2,28.4,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N107R D112V N118A",3
"lib2","SARS-CoV-2","GCACGTCATCTTGCAT",8,329.71,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A42S G83D G117L G146V T201S",5
"lib2","SARS-CoV-2","GCACGTCCCTTGAATG",10,59.89,6.36,-4.47,0.6,1.5,1.14,0.02,">1 nonsynonymous","A14Q G86F",2
"lib2","SARS-CoV-2","GCACGTGGAGGATTTC",4,38.54,6.57,-4.27,0.37,1.5,1.14,0.02,">1 nonsynonymous","C158L Y165F S184D",3
"lib2","SARS-CoV-2","GCACGTGGTTATTTGC",1,1.01,NA,NA,NA,NA,NA,NA,"stop","R78C L122I K128L G166*",4
"lib2","SARS-CoV-2","GCACGTTAGAATAGAC",3,8.51,NA,NA,NA,NA,NA,NA,"stop","K87T D98*",2
"lib2","SARS-CoV-2","GCACGTTCGGGACATG",7,0,NA,NA,NA,NA,NA,NA,"stop","A14G V37*",2
"lib2","SARS-CoV-2","GCACGTTCGTGAATAG",5,40.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I88T R127L G155S",3
"lib2","SARS-CoV-2","GCACTAAAAACAGTCT",3,29.09,10.69,-0.14,0.05,2.85,1.14,0,">1 nonsynonymous","P7Q V173H",2
"lib2","SARS-CoV-2","GCACTAAACACTGAGT",5,52.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4R S19R F126L R179W",4
"lib2","SARS-CoV-2","GCACTAAACTCGCTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H N110M",2
"lib2","SARS-CoV-2","GCACTAAATACCTAAG",2,6.09,9.26,-1.57,0.35,2.16,1.02,0.04,">1 nonsynonymous","D112I Q144P",2
"lib2","SARS-CoV-2","GCACTAACAAACCCTA",4,27.29,9.36,-1.48,0.14,1.73,1.17,0.01,">1 nonsynonymous","A18I C61S",2
"lib2","SARS-CoV-2","GCACTAATCGAGCTGA",3,85.57,10.78,-0.05,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACTAATTATTACAG",7,2.76,NA,NA,NA,NA,NA,NA,"stop","K26A F62H E141*",3
"lib2","SARS-CoV-2","GCACTACACTAATTAT",1,14.45,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","F17L Y21L V71K D90V F99L S139I",6
"lib2","SARS-CoV-2","GCACTACCAAACACCT",1,5.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y A105L L125Q V153M",4
"lib2","SARS-CoV-2","GCACTACCCGCGCCGA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N G101R",2
"lib2","SARS-CoV-2","GCACTACGACCTGTTG",11,151.22,10.76,-0.07,0.04,2.96,1.05,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","GCACTAGTATCACTTA",3,67.95,10.17,-0.67,0.05,2.68,1.01,0,">1 nonsynonymous","R27T R136Y",2
"lib2","SARS-CoV-2","GCACTAGTGACCTTTA",2,9.27,9.37,-1.47,0.3,1.96,1.04,0.04,"1 nonsynonymous","R25N",1
"lib2","SARS-CoV-2","GCACTAGTGCTGTATA",9,66.9,9.57,-1.27,0.1,1.97,1.1,0,">1 nonsynonymous","Y35N D98L T201R",3
"lib2","SARS-CoV-2","GCACTATAAACCTACC",7,230.36,10.15,-0.69,0.04,2.91,1.04,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","GCACTATACTTACAAA",2,7.39,11.53,0.7,0.12,3,1,0,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","GCACTATATACGAGAA",1,42.19,8.62,-2.21,0.11,1.63,1.07,0,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","GCACTATATCTTTCGA",12,202.01,10.8,-0.04,0.05,2.92,1.09,0,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","GCACTATCCAAGACCC",7,78.4,10.85,0.02,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACTATCCCCAGTCG",4,64.5,10.64,-0.2,0.05,2.98,1.02,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","GCACTATCTTCCCTGC",1,24.43,9.93,-0.91,0.07,3,1.01,0,">1 nonsynonymous","A22K E154I",2
"lib2","SARS-CoV-2","GCACTATGTAGTTCCC",1,43.83,8.56,-2.28,0.1,2.52,1.05,0,">1 nonsynonymous","T46H P54C G117F",3
"lib2","SARS-CoV-2","GCACTATGTTTAGACG",5,87.97,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9E C61G G86L Y93D",4
"lib2","SARS-CoV-2","GCACTATTAGCCTAAA",10,255.08,10.71,-0.13,0.03,2.95,1.08,0,">1 nonsynonymous","V37C K56Q Q163S",3
"lib2","SARS-CoV-2","GCACTCAAATACCAGG",3,23.88,6.39,-4.45,0.32,1.5,1.12,0.01,">1 nonsynonymous","C49S C61F",2
"lib2","SARS-CoV-2","GCACTCAATGATAAAT",6,26.72,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","C61L I88K K132M",3
"lib2","SARS-CoV-2","GCACTCACACCGACTA",9,196.33,10.79,-0.04,0.04,2.95,1.06,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","GCACTCACGATAGCTA",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A I88G I142T",3
"lib2","SARS-CoV-2","GCACTCATAATCAACC",10,226.58,10.41,-0.43,0.04,2.84,1.04,0,">1 nonsynonymous","N1L Y50F N64V T201K",4
"lib2","SARS-CoV-2","GCACTCATAGCCAAGT",3,17,6.17,-4.66,1.36,1.5,1.16,0.04,">1 nonsynonymous","N64Y F70Q N107R Q168D",4
"lib2","SARS-CoV-2","GCACTCATGACAATAC",6,34.87,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C49D V181M",2
"lib2","SARS-CoV-2","GCACTCATTTTATTGC",7,167.7,9.88,-0.95,0.05,2.75,1.02,0,">1 nonsynonymous","F8V N151T",2
"lib2","SARS-CoV-2","GCACTCATTTTGTTCG",4,104.52,10.07,-0.76,0.03,2.94,1.02,0,">1 nonsynonymous","K26L K94A L125A",3
"lib2","SARS-CoV-2","GCACTCCAAGGTCTTT",1,9.92,10.51,-0.32,0.11,2.99,1.04,0.01,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","GCACTCCCAAATACCA",4,34.89,9.89,-0.95,0.1,2.66,1,0.01,">1 nonsynonymous","T15P N107G",2
"lib2","SARS-CoV-2","GCACTCCCATTCGCCT",3,37.07,10.62,-0.22,0.03,2.91,1.1,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","GCACTCCCGAATTTCA",16,156.09,6.87,-3.97,0.36,1.5,1.17,0.03,">1 nonsynonymous","S36T W106A S129G Y178A",4
"lib2","SARS-CoV-2","GCACTCCCGACACGGA",2,132.47,10.31,-0.52,0.03,2.92,1.03,0,">1 nonsynonymous","K26E A33P T193R",3
"lib2","SARS-CoV-2","GCACTCGAATTGAAGG",1,36.52,8.18,-2.66,0.19,1.69,1.12,0.02,">1 nonsynonymous","A89T Q176A T193N",3
"lib2","SARS-CoV-2","GCACTCGATAACGGGC",1,20.64,9.11,-1.72,0.12,2.33,1.02,0.01,">1 nonsynonymous","G9W E154L Y178I T201V",4
"lib2","SARS-CoV-2","GCACTCGTACAAAGCA",2,70.62,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K26V A105T T140Q C158Y",4
"lib2","SARS-CoV-2","GCACTCGTTAATGTCG",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Y V77E",2
"lib2","SARS-CoV-2","GCACTCTCACCGAGAA",4,0.42,NA,NA,NA,NA,NA,NA,"stop","T15* P149M",2
"lib2","SARS-CoV-2","GCACTCTGGTATAAAT",2,29.09,10.78,-0.06,0.06,2.9,1.08,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","GCACTCTTATATTGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R S113L F160L",3
"lib2","SARS-CoV-2","GCACTGAAGACTCGGA",1,7.56,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","C6F A33R S53F T63L S69R D97F N151H",7
"lib2","SARS-CoV-2","GCACTGAATGAGAAAT",13,117.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S19L G86Y",2
"lib2","SARS-CoV-2","GCACTGACAGGTCCTA",3,1.21,NA,NA,NA,NA,NA,NA,"stop","E10M L95* R124V G146R F156L",5
"lib2","SARS-CoV-2","GCACTGACGCTAAATG",3,22.1,10.64,-0.19,0.08,2.99,1,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","GCACTGACTTTATCGT",4,10.2,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","C49S D90F T100F I104K",4
"lib2","SARS-CoV-2","GCACTGAGAGACGAAA",9,65.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18L S43N L131R V173G",4
"lib2","SARS-CoV-2","GCACTGCAGAATAATT",6,72,10.85,0.02,0.06,2.96,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GCACTGCGGCGCACGT",1,63.58,10.07,-0.76,0.05,2.84,1.09,0,">1 nonsynonymous","C6N S139G",2
"lib2","SARS-CoV-2","GCACTGCGTATGAACG",3,17.35,10.85,0.01,0.05,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GCACTGGAATCATCCG",4,21.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C61F D112Y T140A",3
"lib2","SARS-CoV-2","GCACTGGAATTAGTCG",3,16.39,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","V77L L95R Y119V R136K",4
"lib2","SARS-CoV-2","GCACTGGCCCCTTTGC",4,19.11,8.57,-2.26,0.33,1.5,1,0.06,">1 nonsynonymous","V11S N58A D112L V173R",4
"lib2","SARS-CoV-2","GCACTGGCCGTATCGC",2,50.55,6.23,-4.61,0.67,1.5,1.25,0.02,">1 nonsynonymous","E141L L162Q T170S",3
"lib2","SARS-CoV-2","GCACTGGGGGTAACGC",9,108.62,10.8,-0.04,0.06,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACTGGTAAGCAAGG",4,0.97,NA,NA,NA,NA,NA,NA,"stop","A89* N107L",2
"lib2","SARS-CoV-2","GCACTGGTCGGCTTAT",3,56.01,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V20L P96H",2
"lib2","SARS-CoV-2","GCACTGGTGAAAAATG",10,78.19,6,-4.84,2,2.07,1.21,0.01,">1 nonsynonymous","C6N F70G S129W F160R P177G",5
"lib2","SARS-CoV-2","GCACTGTAATCAATTT",10,4.11,NA,NA,NA,NA,NA,NA,"stop","G83L N118P P149*",3
"lib2","SARS-CoV-2","GCACTGTCCACGTTTT",12,38.63,7.43,-3.41,0.32,1.5,1.26,0.02,">1 nonsynonymous","I104R N171M",2
"lib2","SARS-CoV-2","GCACTGTGCAGCCAAC",5,39.24,10.74,-0.09,0.04,2.95,1.02,0,">1 nonsynonymous","K128P Q144N",2
"lib2","SARS-CoV-2","GCACTGTGCTATTGAT",10,74.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10R V77E S164Y G174Y",4
"lib2","SARS-CoV-2","GCACTTAACAAGGACA",4,103.7,10.46,-0.38,0.07,2.74,1.06,0,"1 nonsynonymous","D90W",1
"lib2","SARS-CoV-2","GCACTTAACCTAAAAA",2,17.49,7.27,-3.57,0.23,1.5,1.02,0.02,">1 nonsynonymous","V65W D112E",2
"lib2","SARS-CoV-2","GCACTTAAGATTTGCA",8,0.72,NA,NA,NA,NA,NA,NA,"stop","A14R D68* Q84L P169A",4
"lib2","SARS-CoV-2","GCACTTAAGGGGCCAT",2,27.1,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A42F L60P G172L",3
"lib2","SARS-CoV-2","GCACTTACAAAAGTTT",4,66.18,6.16,-4.67,0.97,1.5,1.15,0.03,">1 nonsynonymous","T3M G101C G117I Y143S T148V",5
"lib2","SARS-CoV-2","GCACTTACATCCCGTA",1,20.41,10.7,-0.13,0.08,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCACTTAGAATTTAAA",4,166.85,9.34,-1.49,0.04,2.95,1.07,0,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","GCACTTAGTACAAAAA",3,8.02,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F62V V71R F99W",3
"lib2","SARS-CoV-2","GCACTTATACCGCACT",2,43.07,10.71,-0.12,0.04,3,1,0,">1 nonsynonymous","F62L N120L V153K",3
"lib2","SARS-CoV-2","GCACTTATCGGTTAAG",2,8.23,6,-4.84,2,3,1.15,0.03,">1 nonsynonymous","L38K T100I I104S G116Y Y143F",5
"lib2","SARS-CoV-2","GCACTTATGACCTGAA",6,24.7,9.98,-0.85,0.29,1.67,1.07,0.06,">1 nonsynonymous","T55G V65E A145F",3
"lib2","SARS-CoV-2","GCACTTATTATAATCA",3,17.46,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","GCACTTCAACGTTAAA",16,263.75,9.95,-0.89,0.06,2.14,1.01,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","GCACTTCAAGTGCAAC",4,69.97,10.88,0.04,0.07,2.94,1.06,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","GCACTTCAGGGTAACG",2,24.84,6.9,-3.94,0.47,1.5,1.13,0.06,">1 nonsynonymous","D98G V103Y N157S T201K",4
"lib2","SARS-CoV-2","GCACTTCATTTCCCAG",7,50.36,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12S L57K V65D Y121T P133S L183V K198I",7
"lib2","SARS-CoV-2","GCACTTCCGATACAAT",9,164.91,10.25,-0.59,0.04,2.8,1.09,0,">1 nonsynonymous","N13K N58H V153L",3
"lib2","SARS-CoV-2","GCACTTCGAACGAGAA",9,111.56,6.18,-4.66,0.33,1.5,1.12,0,">1 nonsynonymous","A22P T55L R78S C102W",4
"lib2","SARS-CoV-2","GCACTTCGGCTATCCT",7,131.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T55L Y91R S139C P177Q",4
"lib2","SARS-CoV-2","GCACTTCTGACTTTTT",2,8.69,6.57,-4.26,0.95,3,1.06,0.01,">1 nonsynonymous","N40Y G74Q G152L G174R L188V",5
"lib2","SARS-CoV-2","GCACTTCTGTAGCTCG",11,206.16,10.68,-0.15,0.03,2.93,1.02,0,"1 nonsynonymous","D59F",1
"lib2","SARS-CoV-2","GCACTTGACGCCAGGG",5,133.35,10.27,-0.56,0.05,2.79,1.08,0,">1 nonsynonymous","T15K E141G Q163V Q168C",4
"lib2","SARS-CoV-2","GCACTTGATACTCACT",8,168.21,10.78,-0.05,0.03,2.96,1.05,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GCACTTGGAGACATAA",1,19,9.6,-1.24,0.23,1.83,1,0.02,">1 nonsynonymous","S36N A89F K198T",3
"lib2","SARS-CoV-2","GCACTTGGTAGCTTTT",2,79.55,8.37,-2.47,0.15,2.79,1.08,0.01,">1 nonsynonymous","Y66I Y143A",2
"lib2","SARS-CoV-2","GCACTTGTCCTCTGGA",1,6.81,8.67,-2.16,0.45,1.51,1.04,0.04,">1 nonsynonymous","W23R D97V",2
"lib2","SARS-CoV-2","GCACTTTCAATTTCAT",3,104.22,10.63,-0.21,0.03,2.93,1.08,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","GCACTTTCCCCGGCAA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","T55V D97* F134Q E141L G146R G166S",6
"lib2","SARS-CoV-2","GCACTTTCCCTGCGTT",9,10.63,NA,NA,NA,NA,NA,NA,"stop","K94* Y119L",2
"lib2","SARS-CoV-2","GCACTTTGGTGGATAT",3,47.78,10.07,-0.76,0.05,2.86,1,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","GCAGAAAAAATAACGA",7,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I V20G K114D",3
"lib2","SARS-CoV-2","GCAGAAAAGAGACCCA",1,1.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146P",1
"lib2","SARS-CoV-2","GCAGAAAATGCGGGCT",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L G86K V153W",3
"lib2","SARS-CoV-2","GCAGAAACCCCCCACG",4,94.78,9.86,-0.98,0.06,2.09,1.08,0,"1 nonsynonymous","L38Q",1
"lib2","SARS-CoV-2","GCAGAAAGTCACACAT",2,43.27,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48R K56M Y93S",3
"lib2","SARS-CoV-2","GCAGAAATACTAAAAG",4,106.6,10.83,-0.01,0.06,2.96,1.07,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","GCAGAAATAGTATAGG",5,0.48,NA,NA,NA,NA,NA,NA,"stop","N24L G101* P161V N171S",4
"lib2","SARS-CoV-2","GCAGAAATCGATATAG",6,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F T148D",2
"lib2","SARS-CoV-2","GCAGAACACATAAAAT",2,49.12,10.77,-0.07,0.06,2.86,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGAACACTTGACAT",3,20.3,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","D98Y N107R Y121A L131S V173D",5
"lib2","SARS-CoV-2","GCAGAACATACACTTA",7,4.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCAGAACATGCACACA",3,36.4,10.77,-0.07,0.08,2.93,1.01,0,">1 nonsynonymous","N1G E141T",2
"lib2","SARS-CoV-2","GCAGAACGACTTATTA",2,110.54,7.51,-3.33,0.14,1.68,1.13,0.01,">1 nonsynonymous","N4T Q168K P177S",3
"lib2","SARS-CoV-2","GCAGAACGAGAAATAC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A S36Y F47L N58S Y119T",5
"lib2","SARS-CoV-2","GCAGAACTCAGGTGGT",6,83.93,10.91,0.08,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGAACTTCTACTTC",1,5.34,10.22,-0.62,0.19,2.68,1.04,0.01,">1 nonsynonymous","N13M G51D I138A",3
"lib2","SARS-CoV-2","GCAGAAGATAAGTGAC",5,74.76,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","GCAGAAGCATATATAA",17,2.69,NA,NA,NA,NA,NA,NA,"stop","P54G N107P E135*",3
"lib2","SARS-CoV-2","GCAGAAGTAAACATAC",17,270.56,9.97,-0.87,0.05,2.6,1.04,0,">1 nonsynonymous","N1W C6F P54L",3
"lib2","SARS-CoV-2","GCAGAAGTATCAAGAG",2,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64R L183D",2
"lib2","SARS-CoV-2","GCAGAATAAACGCGAA",12,91.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2A I88K",2
"lib2","SARS-CoV-2","GCAGAATAACTAAGTA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","A81N G174* E186F",3
"lib2","SARS-CoV-2","GCAGAATACACCTCGC",2,70.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12W P177F A192S",3
"lib2","SARS-CoV-2","GCAGAATGAAAAGTTG",3,7.54,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","G86I T100A L183D",3
"lib2","SARS-CoV-2","GCAGAATGAGTAACAA",3,26.9,8.44,-2.4,0.24,1.5,1.04,0.02,">1 nonsynonymous","A18W F134L P169L",3
"lib2","SARS-CoV-2","GCAGAATTAACCGCCA",6,117.87,9.3,-1.54,0.06,2.5,1.06,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","GCAGAATTAGAATCAA",6,68.88,10.1,-0.74,0.08,2.81,1.04,0,">1 nonsynonymous","Y35T D90E L122F",3
"lib2","SARS-CoV-2","GCAGAATTTCCAATGT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","V37S L122*",2
"lib2","SARS-CoV-2","GCAGACAACAAGCATT",8,0.49,NA,NA,NA,NA,NA,NA,"stop","Q84H L122* K199*",3
"lib2","SARS-CoV-2","GCAGACAACGCACTAA",13,87.59,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L5I G9Y V32I D34G Y39H A89G K128I G152W",8
"lib2","SARS-CoV-2","GCAGACAATAAACCCT",4,52.53,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L60T C150I Q176R",3
"lib2","SARS-CoV-2","GCAGACAATCGCCGAC",3,31.37,10.74,-0.1,0.04,2.91,1.11,0,">1 nonsynonymous","C61S T201Y",2
"lib2","SARS-CoV-2","GCAGACACCCGTTCGT",4,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73P N92M V103N Y119F Q144D T148D",6
"lib2","SARS-CoV-2","GCAGACCAGCTTTTTA",1,7.97,8.59,-2.25,0.36,1.5,1,0.04,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","GCAGACCATGCGCCAA",3,54.05,10.81,-0.03,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGACCCTAATATCG",5,74.04,6,-4.83,0.71,1.5,1.13,0.01,">1 nonsynonymous","W106D N120I",2
"lib2","SARS-CoV-2","GCAGACCTAGATTTTA",13,51.2,8.66,-2.18,0.17,1.5,1.15,0.01,">1 nonsynonymous","S45C G51K D97F P149H",4
"lib2","SARS-CoV-2","GCAGACCTTAATCATC",9,35.81,6,-4.84,1.41,1.5,1.24,0.03,">1 nonsynonymous","T63S G101N P149R Y159F G166F",5
"lib2","SARS-CoV-2","GCAGACGTAGTAACCT",6,98,7.64,-3.2,0.27,1.5,1.15,0.02,">1 nonsynonymous","E135K G146R",2
"lib2","SARS-CoV-2","GCAGACGTCTTAAAAA",11,178.13,10.84,0,0.06,2.89,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAGACTACGCGCGCA",2,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N W106G S129A P149S",4
"lib2","SARS-CoV-2","GCAGACTCGCGAGGTC",4,69.53,10.8,-0.03,0.05,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGACTGCGATCTCA",1,9.47,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9R S53Y N58H I138C C150N",5
"lib2","SARS-CoV-2","GCAGACTTGTTAAAGG",8,34.73,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N1S Y93L F167R",3
"lib2","SARS-CoV-2","GCAGACTTTAACTTAG",6,9.1,8.66,-2.17,0.15,2.22,1.14,0.01,">1 nonsynonymous","N4F V11F V173P",3
"lib2","SARS-CoV-2","GCAGAGAAAATCCACT",8,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W D34M K87T F156S T170Y",5
"lib2","SARS-CoV-2","GCAGAGAACCAAAACA",5,53.67,6.29,-4.55,0.67,1.5,1.24,0.03,">1 nonsynonymous","T63F L95M R179C",3
"lib2","SARS-CoV-2","GCAGAGACGCACCCTT",4,69.77,10.78,-0.06,0.07,2.89,1.11,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","GCAGAGAGGCTCCAAG",5,38.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y50D T63K V71A T140A",4
"lib2","SARS-CoV-2","GCAGAGATTCCGTTGG",1,7.98,7.28,-3.56,0.45,1.5,1.05,0.06,">1 nonsynonymous","T85S C158V",2
"lib2","SARS-CoV-2","GCAGAGCAATACACAG",1,13.34,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","L5C N40I C49V Q79V Y91F D112T N120K",7
"lib2","SARS-CoV-2","GCAGAGCCAAAGCACG",7,65.55,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","D90L A105K G152L Q176K",4
"lib2","SARS-CoV-2","GCAGAGCCAATCATGG",1,49.65,8.45,-2.39,0.11,2.42,1.07,0,">1 nonsynonymous","E135V N151R T170N L188P",4
"lib2","SARS-CoV-2","GCAGAGCGCCCAGCGA",5,5.53,NA,NA,NA,NA,NA,NA,"stop","G9R S41* I88S",3
"lib2","SARS-CoV-2","GCAGAGGTAAAATGGC",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35Q N107I K128L",3
"lib2","SARS-CoV-2","GCAGAGTTATAATAGA",6,68.25,10.2,-0.64,0.09,2.51,1,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","GCAGATAAAGAGTGAT",1,0.89,NA,NA,NA,NA,NA,NA,"stop","E10D S41P S113M Y143A S184* T201L",6
"lib2","SARS-CoV-2","GCAGATACCTACGTCA",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Q I104V Y165S V173K",4
"lib2","SARS-CoV-2","GCAGATACTATGAACA",3,63.91,10.72,-0.12,0.04,2.94,1.07,0,"1 nonsynonymous","T85Y",1
"lib2","SARS-CoV-2","GCAGATACTTGAATAT",7,126.98,10.2,-0.63,0.04,2.93,1.06,0,">1 nonsynonymous","R27I N110T G174F",3
"lib2","SARS-CoV-2","GCAGATAGAAGGTACC",1,24.92,10.88,0.05,0.08,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGATAGACCAAGAA",3,30.05,10.74,-0.09,0.05,2.94,1.06,0,"1 nonsynonymous","D98M",1
"lib2","SARS-CoV-2","GCAGATATCCCGGAGA",2,44.23,6,-4.84,1.68,1.5,1.13,0.02,">1 nonsynonymous","I2F K56E N107T A145Y P177T",5
"lib2","SARS-CoV-2","GCAGATCAACGACATA",7,79.68,10.21,-0.63,0.09,2.11,1.01,0,"1 nonsynonymous","E76V",1
"lib2","SARS-CoV-2","GCAGATCAGACGTAAT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40F I80F Y175D",3
"lib2","SARS-CoV-2","GCAGATCCGCCTACAC",2,38.56,10.91,0.08,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGATCTAACAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N64F A81S T85*",3
"lib2","SARS-CoV-2","GCAGATCTGACAGACA",1,17.19,8.59,-2.24,0.22,1.5,1.09,0.02,">1 nonsynonymous","A18H S45Y Y66E",3
"lib2","SARS-CoV-2","GCAGATCTTAACGACT",6,80.59,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36M N92E K128Y E154H L162M",5
"lib2","SARS-CoV-2","GCAGATGCCACCTTTA",9,150.83,10.83,0,0.06,2.97,1.05,0,"1 nonsynonymous","S200P",1
"lib2","SARS-CoV-2","GCAGATGGTGTAACGT",12,121.32,10.78,-0.06,0.04,2.93,1.07,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","GCAGATGTATTCACAC",9,16.86,7.64,-3.19,0.46,1.97,1.17,0.05,">1 nonsynonymous","A14P P54Q G83H Y91P P197R",5
"lib2","SARS-CoV-2","GCAGATGTATTGTAAT",5,82.51,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7S K94M R127L F156S",4
"lib2","SARS-CoV-2","GCAGATGTGAATTCGT",8,195.09,10.73,-0.1,0.05,2.93,1.1,0,"1 nonsynonymous","S164N",1
"lib2","SARS-CoV-2","GCAGATTAGTCAATAA",2,0.57,NA,NA,NA,NA,NA,NA,"stop","N13* D98L Q176L",3
"lib2","SARS-CoV-2","GCAGATTCAACTAGTG",18,232.71,9.84,-1,0.04,2.76,1.09,0,">1 nonsynonymous","K132S Q144T A145T S200H",4
"lib2","SARS-CoV-2","GCAGATTCGATATGAA",3,25.29,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L5K R25E W106G E154F",4
"lib2","SARS-CoV-2","GCAGATTGCACAAAGT",3,32.87,10.08,-0.75,0.08,2.37,1.03,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GCAGATTGGACAATAC",9,32.24,6,-4.84,2,3,1.22,0,">1 nonsynonymous","G101R Y119G T201V",3
"lib2","SARS-CoV-2","GCAGATTTCGCTATAA",9,115.3,10.07,-0.76,0.07,2.55,1.06,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","GCAGATTTGTTCTAAG",2,6.84,8.6,-2.23,0.44,1.5,1.04,0.05,">1 nonsynonymous","T3M L60M V103M I138T C158A",5
"lib2","SARS-CoV-2","GCAGATTTTAGTGGGA",7,61.9,8.95,-1.89,0.19,1.5,1.01,0.02,">1 nonsynonymous","C49A N64C S164A",3
"lib2","SARS-CoV-2","GCAGCAAAGATAAACC",16,73.54,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T85A G101S",2
"lib2","SARS-CoV-2","GCAGCAAATAGCAACT",5,92.6,10,-0.83,0.07,2.63,1.02,0,">1 nonsynonymous","A14G K128L",2
"lib2","SARS-CoV-2","GCAGCAATAAACTCTT",2,17.44,9.98,-0.86,0.23,2.19,1.01,0.02,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","GCAGCAATCTCACATA",11,87.94,10.83,0,0.08,2.85,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGCAATTAACAGGA",1,7.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Y K114M Y175G",3
"lib2","SARS-CoV-2","GCAGCACCAGCAGACA",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L V37S C61V L95I",4
"lib2","SARS-CoV-2","GCAGCACTTCACTAAG",2,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R W106N Q144L F160L F167T",5
"lib2","SARS-CoV-2","GCAGCAGAAAACATCG",9,0.66,NA,NA,NA,NA,NA,NA,"stop","T46S K128D G155V G166*",4
"lib2","SARS-CoV-2","GCAGCAGATAAGCCCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y A18F C49R K198Q",4
"lib2","SARS-CoV-2","GCAGCATAATGACAAA",3,1.25,NA,NA,NA,NA,NA,NA,"stop","N64M P96S F126I Y175*",4
"lib2","SARS-CoV-2","GCAGCATCCTAGTGGA",2,98.68,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y21I Q144L Y175P",3
"lib2","SARS-CoV-2","GCAGCATTGATTGTGA",3,16.48,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S19T P96K A105N",3
"lib2","SARS-CoV-2","GCAGCCAATATGTACA",8,73.64,6,-4.84,2,3,1.22,0,">1 nonsynonymous","G146V L162W",2
"lib2","SARS-CoV-2","GCAGCCAGCGTTCCCA",5,38.9,9.55,-1.28,0.14,2.19,1.06,0.01,">1 nonsynonymous","S69V R136H V173G",3
"lib2","SARS-CoV-2","GCAGCCCACGCAAAAC",2,37.29,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L38C D90C G166Q",3
"lib2","SARS-CoV-2","GCAGCCCAGGACTTGG",2,20.06,10.88,0.04,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGCCCATTAAGCTG",5,103.3,10.15,-0.69,0.02,2.97,1.03,0,">1 nonsynonymous","R27V N40G K56T F156Y L188P",5
"lib2","SARS-CoV-2","GCAGCCCCCTACGAAA",3,10.48,6,-4.84,2,3,1.02,0.01,">1 nonsynonymous","G86C L95H F167V",3
"lib2","SARS-CoV-2","GCAGCCGATCAAATCC",1,11.03,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","T15C Y35D N157G N171I",4
"lib2","SARS-CoV-2","GCAGCGAAACTCGTAA",5,157.25,9.07,-1.76,0.06,2.54,1.07,0,">1 nonsynonymous","D90C V115S V173P",3
"lib2","SARS-CoV-2","GCAGCGAATTAAGCTG",8,10.94,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","E10G P54M V103N P197T",4
"lib2","SARS-CoV-2","GCAGCGAGCTATAATT",4,1.57,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","GCAGCGATGACTGCCG",23,258.35,10.84,0,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGCGCGAAATGATA",9,83.43,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38T P54I L95C P161G",4
"lib2","SARS-CoV-2","GCAGCGCGTTGCAAGT",6,120.9,10.74,-0.1,0.04,2.89,1.1,0,">1 nonsynonymous","L5M D90K",2
"lib2","SARS-CoV-2","GCAGCGGACAATCATT",4,13.21,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","V32I S113D E135V E141A P161T L183P",6
"lib2","SARS-CoV-2","GCAGCGTATGCTTCTA",5,50.96,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T46I K94L D112S N151T",4
"lib2","SARS-CoV-2","GCAGCGTATTCACTAT",3,43.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6S Y35K G83V L95V L122D V153D P161Q",7
"lib2","SARS-CoV-2","GCAGCTAATGAAGTTT",1,1.39,NA,NA,NA,NA,NA,NA,"stop","L38Q I104* Y143M",3
"lib2","SARS-CoV-2","GCAGCTACACTCAATT",2,83.35,9.87,-0.96,0.05,2.91,1.03,0,">1 nonsynonymous","L122Q Q176L",2
"lib2","SARS-CoV-2","GCAGCTAGCCTATGCT",5,85.28,7.29,-3.55,0.19,1.5,1.1,0.01,">1 nonsynonymous","V37F R124H",2
"lib2","SARS-CoV-2","GCAGCTAGCTACCATA",5,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M A42N N64I R73A D98S A105L",6
"lib2","SARS-CoV-2","GCAGCTCAAAATTAAA",3,10.53,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N58R F99T I142R",3
"lib2","SARS-CoV-2","GCAGCTCAAGAAAAGA",1,50.12,10.92,0.08,0.08,2.97,1.05,0,">1 nonsynonymous","T55L L111M",2
"lib2","SARS-CoV-2","GCAGCTCCTACCAACT",3,76.34,8.12,-2.72,0.15,1.5,1.09,0.01,">1 nonsynonymous","S129P Y178E",2
"lib2","SARS-CoV-2","GCAGCTGGCACCAACT",12,93.98,10.68,-0.16,0.04,2.9,1.1,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","GCAGCTTAAGCTATAA",12,159.68,8.85,-1.98,0.11,2.13,1.14,0,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","GCAGCTTCGCAGTCTA",4,75.57,10.63,-0.21,0.06,2.86,1.1,0,">1 nonsynonymous","C61R Y91L L131I",3
"lib2","SARS-CoV-2","GCAGCTTGCACTCTTG",5,143.15,10.84,0,0.05,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAGGAAACTTACGAA",14,124.57,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S41W T55S D68Q L95I",4
"lib2","SARS-CoV-2","GCAGGAAATACCAGAG",5,165.89,10.25,-0.59,0.03,2.73,1.07,0,">1 nonsynonymous","G51T I138E",2
"lib2","SARS-CoV-2","GCAGGAACATCAAATA",4,49.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19T T100S P161S",3
"lib2","SARS-CoV-2","GCAGGAAGCCCTGATA",2,69.04,10.58,-0.26,0.05,2.85,1.17,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GCAGGAAGGCTTATAG",11,94.95,10.04,-0.8,0.07,2.43,1.02,0,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","GCAGGAATCTACATCG",1,23.55,10.71,-0.12,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAGGAATCTTCAACA",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G S19G W106L Y123S S147F",5
"lib2","SARS-CoV-2","GCAGGAATTGGCAGTT",3,86.23,10.82,-0.01,0.04,2.95,1.07,0,"1 nonsynonymous","N40G",1
"lib2","SARS-CoV-2","GCAGGACAAATACTTA",6,82.05,10.63,-0.2,0.04,2.95,1.06,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","GCAGGACATAAGGTTA",7,43.25,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G86D K128D R136E T140S R179V",5
"lib2","SARS-CoV-2","GCAGGACATGGATAAA",1,55.15,8.02,-2.82,0.13,1.74,1.1,0.01,">1 nonsynonymous","N4S Y159C",2
"lib2","SARS-CoV-2","GCAGGACCAGTTAGTA",6,20.72,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C6Q C49Q V103T Y121S",4
"lib2","SARS-CoV-2","GCAGGACGTTTAAGAG",2,11.34,10.38,-0.45,0.21,2.71,1,0.01,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","GCAGGACTACGGCTCT",3,97.55,10.88,0.04,0.07,2.94,1.08,0,">1 nonsynonymous","R16A Y39F",2
"lib2","SARS-CoV-2","GCAGGACTCACTGAAC",2,5.84,7.98,-2.86,0.38,2.19,1.17,0.02,">1 nonsynonymous","N1Y G9W D59M T85C K128T",5
"lib2","SARS-CoV-2","GCAGGACTGATAAATG",2,35.98,10.57,-0.27,0.07,2.94,1.02,0,">1 nonsynonymous","P7T Y66L",2
"lib2","SARS-CoV-2","GCAGGAGAAAAGAAAG",2,98.47,10,-0.84,0.07,2.32,1.05,0,">1 nonsynonymous","Y91L R127A",2
"lib2","SARS-CoV-2","GCAGGAGAATATGGCA",1,7.8,9.26,-1.58,0.31,1.75,1,0.02,">1 nonsynonymous","G9R G86S R136K",3
"lib2","SARS-CoV-2","GCAGGAGATCATTTAA",4,42.38,10.41,-0.42,0.06,2.96,1.07,0,"1 nonsynonymous","S147C",1
"lib2","SARS-CoV-2","GCAGGAGCCAACCCCC",9,165.31,8.76,-2.08,0.06,2.69,1.07,0,"1 nonsynonymous","Q176C",1
"lib2","SARS-CoV-2","GCAGGAGCCTGAAACA",13,78.98,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","D34R G86E D97C",3
"lib2","SARS-CoV-2","GCAGGAGGCAAATGTA",7,78.94,10.09,-0.75,0.05,2.62,1.01,0,">1 nonsynonymous","D98C E141I",2
"lib2","SARS-CoV-2","GCAGGAGGGAATAAAA",1,23.93,7.56,-3.27,0.23,1.5,1.13,0.01,">1 nonsynonymous","N4V I104H F126R",3
"lib2","SARS-CoV-2","GCAGGATCGAATCAGT",4,92.42,8.94,-1.9,0.06,2.82,1.11,0,">1 nonsynonymous","S41H G117L",2
"lib2","SARS-CoV-2","GCAGGATGAATAAAAT",4,26.72,6.07,-4.77,0.95,1.5,1.15,0.02,">1 nonsynonymous","I142Q Y165M H189Y",3
"lib2","SARS-CoV-2","GCAGGATGTAATTATG",1,0,NA,NA,NA,NA,NA,NA,"stop","F47L L125* G146T Y159R",4
"lib2","SARS-CoV-2","GCAGGATTTAATAGTT",1,140.69,9.83,-1,0.06,2.44,1.07,0,">1 nonsynonymous","L38T N110E",2
"lib2","SARS-CoV-2","GCAGGCAAAAATAGAT",8,16.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12A D97Y Q168D P191L",4
"lib2","SARS-CoV-2","GCAGGCAAGCTGGTGC",1,10.87,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F99V G116A S139G",3
"lib2","SARS-CoV-2","GCAGGCAATAACGATC",2,14.39,10.37,-0.46,0.08,2.96,1,0,">1 nonsynonymous","N58T G116N",2
"lib2","SARS-CoV-2","GCAGGCACAGGCATCA",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Y N64F P96S",3
"lib2","SARS-CoV-2","GCAGGCACCCACTATA",8,108.53,10.57,-0.26,0.03,2.93,1.05,0,">1 nonsynonymous","A33T K56Q A105S",3
"lib2","SARS-CoV-2","GCAGGCACGGTCTTTC",9,18.35,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99K S147L F185L",3
"lib2","SARS-CoV-2","GCAGGCCACACAACAA",2,108.21,8.39,-2.44,0.14,2.64,1.1,0.01,">1 nonsynonymous","N118S Q163D",2
"lib2","SARS-CoV-2","GCAGGCCATATCAGAC",3,0.13,NA,NA,NA,NA,NA,NA,"stop","G51Q F167L T201*",3
"lib2","SARS-CoV-2","GCAGGCCGCAATACGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N64F Y91S Q144*",3
"lib2","SARS-CoV-2","GCAGGCGAATATTAGA",10,216.56,11.04,0.21,0.04,2.91,1.05,0,"1 nonsynonymous","Q168W",1
"lib2","SARS-CoV-2","GCAGGCGCTAATAATA",2,29.29,6.63,-4.2,0.52,1.5,1.1,0.04,">1 nonsynonymous","L95F Y123L",2
"lib2","SARS-CoV-2","GCAGGCGGAACTAATA",3,27.17,6,-4.84,1.34,3,1.03,0,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","GCAGGCTCAGTTAGGT",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R N13A Y91V",3
"lib2","SARS-CoV-2","GCAGGCTGCCTTCCTT",3,68.31,8.38,-2.46,0.13,2.79,1.03,0.01,">1 nonsynonymous","F12V F44S Y119E F160A",4
"lib2","SARS-CoV-2","GCAGGCTGTAACCTTT",8,3.83,NA,NA,NA,NA,NA,NA,"stop","C6* D75A F156G G174S S200L",5
"lib2","SARS-CoV-2","GCAGGGAAATACAGTT",6,15.98,7.08,-3.76,0.29,1.89,1.12,0.02,">1 nonsynonymous","G86Y P149Q",2
"lib2","SARS-CoV-2","GCAGGGACTTATCAAC",36,603.79,9.65,-1.18,0.06,2.59,1.07,0,">1 nonsynonymous","N24Q C61N Y165W",3
"lib2","SARS-CoV-2","GCAGGGACTTCTCCCA",5,3.91,NA,NA,NA,NA,NA,NA,"stop","N109R Y121* G174R",3
"lib2","SARS-CoV-2","GCAGGGATTCTGTCAG",1,0.83,NA,NA,NA,NA,NA,NA,"stop","K56Y F99* P149T E154T P161H K199Y",6
"lib2","SARS-CoV-2","GCAGGGCGAATAATTA",1,8.77,10.3,-0.53,0.36,1.88,1,0.04,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","GCAGGGGGGCACGAAA",1,13.16,6.46,-4.37,0.84,1.5,1.13,0.05,">1 nonsynonymous","W23P I80L R124S P169L L187S",5
"lib2","SARS-CoV-2","GCAGGGTAACCTACTT",2,37.11,10.8,-0.03,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGGGTTGCTTTTAC",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102V F185D",2
"lib2","SARS-CoV-2","GCAGGTAAATTCCTGA",5,0.23,NA,NA,NA,NA,NA,NA,"stop","A67S I80T Q163*",3
"lib2","SARS-CoV-2","GCAGGTACATCTCTCA",3,17.51,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","K56P F70Y",2
"lib2","SARS-CoV-2","GCAGGTAGTCTTACTG",7,67.44,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A67T G86L",2
"lib2","SARS-CoV-2","GCAGGTATTAACGTTG",1,1.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","GCAGGTCACTAATTGT",1,25.68,10.8,-0.03,0.07,2.92,1.11,0,"1 nonsynonymous","G51R",1
"lib2","SARS-CoV-2","GCAGGTGACTCGTTAA",3,0.66,NA,NA,NA,NA,NA,NA,"stop","F44I L57F L60C I88*",4
"lib2","SARS-CoV-2","GCAGGTGATCCATTTA",2,22.05,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R27K D59Y F167A",3
"lib2","SARS-CoV-2","GCAGGTGCTTCTCTGC",9,38.92,6,-4.84,2,1.5,1.19,0.04,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","GCAGGTTAAAACTTAT",3,68.98,9.56,-1.28,0.08,2.5,1.1,0,">1 nonsynonymous","A22I Q84R K87I D98S",4
"lib2","SARS-CoV-2","GCAGGTTAAATGATCC",2,16.72,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3L S41P R78E G117L L183C",5
"lib2","SARS-CoV-2","GCAGGTTTTATCCCCA",4,47.94,10.72,-0.12,0.04,2.92,1.08,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","GCAGTAAAAAAAAAAT",5,47.34,10.82,-0.01,0.07,3,1.03,0,">1 nonsynonymous","K26Q K128P",2
"lib2","SARS-CoV-2","GCAGTAAAAGGAAATA",5,250.68,10.84,0.01,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGTAAAAGGTAAAG",15,260.51,10.77,-0.06,0.05,2.93,1.06,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","GCAGTAAAGTTAATAA",16,163.02,10.77,-0.07,0.05,2.89,1.12,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","GCAGTAAATAGAGGCC",4,148.45,10.68,-0.15,0.02,2.94,1.06,0,">1 nonsynonymous","T15H P197N",2
"lib2","SARS-CoV-2","GCAGTAACACCAAACA",9,27.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V77P A81S S200C",3
"lib2","SARS-CoV-2","GCAGTAACACTGACCT",16,230.88,10.83,-0.01,0.04,2.87,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGTAACCAATTATA",2,85.24,10.62,-0.21,0.1,2.81,1.03,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","GCAGTAACCCATTGCC",2,26.02,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V77N N107D",2
"lib2","SARS-CoV-2","GCAGTAACTTACCTGT",1,1.04,NA,NA,NA,NA,NA,NA,"stop","I2L L38F G83D L95M P149*",5
"lib2","SARS-CoV-2","GCAGTAAGTGCTAAAA",9,100.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9V Y93P N107P F167M",4
"lib2","SARS-CoV-2","GCAGTAATAACGCCCC",13,112.69,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S53Y V71D G83V G146R",4
"lib2","SARS-CoV-2","GCAGTAATGCACACAG",6,85.66,10.12,-0.72,0.07,2.78,1.07,0,">1 nonsynonymous","Y35A K87M",2
"lib2","SARS-CoV-2","GCAGTAATGCCGTTAA",6,3.86,NA,NA,NA,NA,NA,NA,"stop","C49D N64K I80* P169T",4
"lib2","SARS-CoV-2","GCAGTAATGTACAATA",8,41.31,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A81P N107I",2
"lib2","SARS-CoV-2","GCAGTACAAAACAAGT",4,92.33,10.75,-0.09,0.05,2.87,1.1,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","GCAGTACAACTCCTCG",5,37.84,8.7,-2.13,0.19,2.15,1.06,0.01,">1 nonsynonymous","G152M G174K Y178S",3
"lib2","SARS-CoV-2","GCAGTACCGTTTATAA",5,153.47,10.81,-0.03,0.05,2.96,1.06,0,">1 nonsynonymous","N151S T201R",2
"lib2","SARS-CoV-2","GCAGTAGCAGGGAAAA",2,15.49,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T46R Y91N R136F G166F",4
"lib2","SARS-CoV-2","GCAGTAGCGGATTAAA",10,51.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86R N107Y G174W",3
"lib2","SARS-CoV-2","GCAGTAGTACATGATG",4,0.5,NA,NA,NA,NA,NA,NA,"stop","G9K V77W V103*",3
"lib2","SARS-CoV-2","GCAGTAGTACTTATAG",4,63.69,10.92,0.09,0.06,2.95,1.06,0,"1 nonsynonymous","N120E",1
"lib2","SARS-CoV-2","GCAGTATATAGAGAAA",10,60.31,10.75,-0.08,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCAGTATCCTTGCTTT",5,4.78,NA,NA,NA,NA,NA,NA,"stop","V37D G101* Y175K",3
"lib2","SARS-CoV-2","GCAGTATGTTGATGCG",7,2.04,NA,NA,NA,NA,NA,NA,"stop","L38N E76* A105R S164Y",4
"lib2","SARS-CoV-2","GCAGTCAAACTACGGG",9,139.15,10.65,-0.18,0.02,2.99,1,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","GCAGTCAAATCTTTCC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","L5H N120Y T170S P191S S200*",5
"lib2","SARS-CoV-2","GCAGTCACAACGACAG",8,99.19,10.46,-0.38,0.05,2.89,1.02,0,"1 nonsynonymous","E186C",1
"lib2","SARS-CoV-2","GCAGTCCACGGGTTTG",15,250.18,8.07,-2.76,0.11,1.6,1.08,0,">1 nonsynonymous","S41Y T63C Y175L",3
"lib2","SARS-CoV-2","GCAGTCCTTTTAGAAA",2,1.28,NA,NA,NA,NA,NA,NA,"stop","F8* W106L E135R",3
"lib2","SARS-CoV-2","GCAGTCGACAAAAATT",4,104.61,10.35,-0.48,0.04,2.9,1.08,0,">1 nonsynonymous","S53D G152P",2
"lib2","SARS-CoV-2","GCAGTCGGTATTGCCC",3,48.27,9.37,-1.47,0.08,2.86,1.1,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","GCAGTCGTAAACAAAA",4,1.35,NA,NA,NA,NA,NA,NA,"stop","N1T I80K Y143* G155A F167P",5
"lib2","SARS-CoV-2","GCAGTCTACCTGAAAA",9,130.37,10.44,-0.4,0.02,2.94,1.06,0,">1 nonsynonymous","F44C L122H",2
"lib2","SARS-CoV-2","GCAGTCTATGGGTTAG",13,305.87,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25C K56L R73I Q176I",4
"lib2","SARS-CoV-2","GCAGTCTGATTAAAAA",7,94.97,6,-4.84,1.23,1.5,1.18,0.01,">1 nonsynonymous","R25T K94D T201P",3
"lib2","SARS-CoV-2","GCAGTGAATAGCTACC",3,84.55,8.39,-2.45,0.11,2.13,1.13,0,"1 nonsynonymous","S108H",1
"lib2","SARS-CoV-2","GCAGTGATATTTGATC",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N V103L G155T",3
"lib2","SARS-CoV-2","GCAGTGATCCGGGGCG",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32S G51S F126V L188T",4
"lib2","SARS-CoV-2","GCAGTGATGCCTGATT",9,7.64,NA,NA,NA,NA,NA,NA,"stop","K56* P82R",2
"lib2","SARS-CoV-2","GCAGTGCATTTCCTAG",3,46.76,10.19,-0.64,0.06,2.84,1.15,0,">1 nonsynonymous","K56I G155E",2
"lib2","SARS-CoV-2","GCAGTGCCACAAGGCA",1,21.23,6,-4.84,1.61,1.5,1.21,0.03,">1 nonsynonymous","Y35C C61D Q84L P133L G172T",5
"lib2","SARS-CoV-2","GCAGTGGAGATACGCA",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T D112K",2
"lib2","SARS-CoV-2","GCAGTGGTAATTCTGA",3,105.28,10.04,-0.8,0.07,2.54,1.01,0,">1 nonsynonymous","F12V E141Y",2
"lib2","SARS-CoV-2","GCAGTGGTAGATAAAA",10,0.11,NA,NA,NA,NA,NA,NA,"stop","L60M Y119M S129M N151* R179K",5
"lib2","SARS-CoV-2","GCAGTGTTCAACCCGA",3,62.49,10.8,-0.04,0.05,2.93,1.1,0,">1 nonsynonymous","I2R K199P",2
"lib2","SARS-CoV-2","GCAGTTAAAAAATGCC",1,26.51,6.08,-4.76,0.54,3,1.2,0.01,">1 nonsynonymous","N110S R124E E186I",3
"lib2","SARS-CoV-2","GCAGTTAAAACAATAT",1,63.24,10.61,-0.23,0.07,2.84,1.13,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","GCAGTTAAAGACTACT",22,309.01,9.34,-1.5,0.05,2.66,1.09,0,">1 nonsynonymous","C6N S45G K87M",3
"lib2","SARS-CoV-2","GCAGTTAAGCTCGGCT",3,11.19,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G51C N58E I104D Y159F",4
"lib2","SARS-CoV-2","GCAGTTAGATTTCTCA",25,206.44,9.94,-0.89,0.04,2.42,1.03,0,">1 nonsynonymous","A33G A42I D90C",3
"lib2","SARS-CoV-2","GCAGTTATAGCAGCAT",3,76.94,6.09,-4.74,0.65,1.56,1.15,0.01,"1 nonsynonymous","P177V",1
"lib2","SARS-CoV-2","GCAGTTATGAATAACT",3,1.11,NA,NA,NA,NA,NA,NA,"stop","G116* Q144P",2
"lib2","SARS-CoV-2","GCAGTTCGAATTTAGG",4,18.6,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","N4L C61M A105I D112V F134S S147V F185P",7
"lib2","SARS-CoV-2","GCAGTTCGCATCAACT",12,221.47,10.84,0.01,0.03,2.93,1.07,0,"1 nonsynonymous","K199W",1
"lib2","SARS-CoV-2","GCAGTTCTCAGCCAGT",3,49.77,8.87,-1.97,0.04,2.67,1.06,0,">1 nonsynonymous","T55H D90V F126H",3
"lib2","SARS-CoV-2","GCAGTTCTTCATCAAT",4,89.52,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14R S36K L122W I142K G172V T201D",6
"lib2","SARS-CoV-2","GCAGTTGCACAGAAAT",6,182,10.81,-0.02,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCAGTTGCCCCAATTT",6,353.6,9.07,-1.77,0.04,2.89,1.06,0,">1 nonsynonymous","K132E P149L Q168I",3
"lib2","SARS-CoV-2","GCAGTTGCGCTACACC",5,73.23,9.06,-1.77,0.09,2.66,1.06,0,">1 nonsynonymous","Y35C K56I F156M",3
"lib2","SARS-CoV-2","GCAGTTGGCAGTACAT",9,90.27,10.64,-0.19,0.03,2.98,1.03,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","GCAGTTGTTTGGGTGA",4,110.37,8.67,-2.17,0.1,2.95,1.1,0,">1 nonsynonymous","K56E S113M",2
"lib2","SARS-CoV-2","GCAGTTTACACAGGTA",2,138.31,7.2,-3.64,0.12,2.06,1.11,0,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","GCAGTTTATTACTAGG",1,17.72,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N30S F99S S139R V181N",4
"lib2","SARS-CoV-2","GCAGTTTGGCAAAGCC",1,24.94,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","A22M A42E A105L N157I",4
"lib2","SARS-CoV-2","GCAGTTTTTTTGAGCG",6,0.27,NA,NA,NA,NA,NA,NA,"stop","V37K A89M N107E Y121N K128*",5
"lib2","SARS-CoV-2","GCATAAAAAAGGGGAA",6,35.4,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G101V N157S",2
"lib2","SARS-CoV-2","GCATAAAAATAACACC",2,19.57,7.8,-3.04,0.31,1.5,1.02,0.05,">1 nonsynonymous","V11H I28P P191T",3
"lib2","SARS-CoV-2","GCATAAAACGCTGAGA",16,170.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83D P96C F134M Q163I",4
"lib2","SARS-CoV-2","GCATAAACACACCAAA",4,68.52,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44I Q84N F99M Q176S",4
"lib2","SARS-CoV-2","GCATAAACCGGCCGGC",5,6.89,NA,NA,NA,NA,NA,NA,"stop","I104* K128H V153G F160S",4
"lib2","SARS-CoV-2","GCATAAACGAGGGGTA",5,92.54,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A18Q S36I G51Y E135V Q163K V180Y",6
"lib2","SARS-CoV-2","GCATAAACGTAGAACT",12,186.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E10I L38H L95C Y121E Q144A N157G",6
"lib2","SARS-CoV-2","GCATAAAGAAAGGCAT",3,61.77,9.47,-1.37,0.17,1.58,1.06,0.02,">1 nonsynonymous","G83S A105F",2
"lib2","SARS-CoV-2","GCATAAAGACGCGTAG",1,21.28,10.26,-0.57,0.08,2.92,1,0,">1 nonsynonymous","T63K N107S V173Q",3
"lib2","SARS-CoV-2","GCATAAATAGTTATAT",4,42.2,10.66,-0.17,0.06,2.91,1.05,0,">1 nonsynonymous","N24G N110L",2
"lib2","SARS-CoV-2","GCATAAATCAGAGTAA",7,128.45,10.24,-0.59,0.05,2.85,1.07,0,">1 nonsynonymous","R16C G83S",2
"lib2","SARS-CoV-2","GCATAAATCGAAACCG",9,66.03,9.87,-0.96,0.05,2.87,1.08,0,">1 nonsynonymous","S29T Y121V",2
"lib2","SARS-CoV-2","GCATAAATCGACGTAC",7,79.75,10.9,0.06,0.05,2.95,1.07,0,">1 nonsynonymous","S43R P197Y",2
"lib2","SARS-CoV-2","GCATAAATCTCTACGG",3,5.48,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F12D L57C F70M Y123G I142F F185S",6
"lib2","SARS-CoV-2","GCATAAATTCGCAGGT",3,1.85,NA,NA,NA,NA,NA,NA,"stop","T63* A89T",2
"lib2","SARS-CoV-2","GCATAACAAAAAGTAA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T G86K",2
"lib2","SARS-CoV-2","GCATAACAATGTTTTT",2,25.93,6,-4.84,0.37,3,1.06,0,">1 nonsynonymous","V37M C49G D90V K198S",4
"lib2","SARS-CoV-2","GCATAACAGGATGATG",13,238.81,10.81,-0.03,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATAACATAAAGAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I Y91E",2
"lib2","SARS-CoV-2","GCATAACCAATGCAGC",2,20.16,6,-4.84,1.8,3,1.19,0.01,">1 nonsynonymous","D90V F99R E135G",3
"lib2","SARS-CoV-2","GCATAACCACAAACCC",3,2.24,NA,NA,NA,NA,NA,NA,"stop","A18* R27M P96R N171K",4
"lib2","SARS-CoV-2","GCATAACGAAAGTACT",2,12.6,6.36,-4.47,2,1.5,1.01,0.01,">1 nonsynonymous","I88A L183F",2
"lib2","SARS-CoV-2","GCATAACGGTCTGTAT",6,0.23,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCATAACGTCTGCCAT",10,179.84,8.16,-2.67,0.1,1.97,1.07,0,">1 nonsynonymous","Y119L P161S",2
"lib2","SARS-CoV-2","GCATAACTACCCGCCG",8,30.3,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","S45T F70N D97R",3
"lib2","SARS-CoV-2","GCATAACTCACAGCAA",5,63.9,8.96,-1.87,0.07,2.91,1.13,0,">1 nonsynonymous","T3S T85S Y119C",3
"lib2","SARS-CoV-2","GCATAAGACAAGCCCG",10,184.71,10.5,-0.34,0.05,2.84,1.09,0,">1 nonsynonymous","A42I T85R I142T T201S",4
"lib2","SARS-CoV-2","GCATAAGAGCCAAGTA",11,87.85,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G51D K94G I104C G117V A145V G172L P177I",7
"lib2","SARS-CoV-2","GCATAAGAGGAAACTG",3,6.83,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N4T S41E L57K T85A D98L V103T S139L",7
"lib2","SARS-CoV-2","GCATAAGAGTGACAAT",15,84.55,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14F N64Y G101Y Y175A",4
"lib2","SARS-CoV-2","GCATAAGCATACTAGC",1,38.46,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A22W C61I D68A D90S L95C Q144S",6
"lib2","SARS-CoV-2","GCATAAGGAATCTTCG",14,117.78,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y93F Y143R",2
"lib2","SARS-CoV-2","GCATAAGGATACATCG",9,2.91,NA,NA,NA,NA,NA,NA,"stop","G9P A42* D90C",3
"lib2","SARS-CoV-2","GCATAAGGATATATAA",11,1.46,NA,NA,NA,NA,NA,NA,"stop","F8I W106L I142* S147N",4
"lib2","SARS-CoV-2","GCATAATAAGATTATT",2,25.35,9.66,-1.17,0.12,2.81,1.03,0.01,">1 nonsynonymous","V37L K87G S139K E186N",4
"lib2","SARS-CoV-2","GCATAATAATGGGCAA",3,25.86,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C61L G86C K94P G172A",4
"lib2","SARS-CoV-2","GCATAATAGAACATAA",7,0.91,NA,NA,NA,NA,NA,NA,"stop","T3A Y35* L122K F156H",4
"lib2","SARS-CoV-2","GCATAATAGATATAAA",5,48.1,10.62,-0.21,0.03,2.91,1.09,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GCATAATAGTATAGGA",4,37.47,8.04,-2.8,0.22,2.06,1.19,0.01,"1 nonsynonymous","N171K",1
"lib2","SARS-CoV-2","GCATAATCGGGGTCAA",4,11.03,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","D68K S139M",2
"lib2","SARS-CoV-2","GCATAATGAAGCCTAA",5,26.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G F99I T148K A190R",4
"lib2","SARS-CoV-2","GCATAATTCGCAATTT",2,20.91,6,-4.84,2,3,1.04,0,">1 nonsynonymous","S129I R179M",2
"lib2","SARS-CoV-2","GCATAATTCTGTAATG",1,11.15,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","N4D G101L N107L",3
"lib2","SARS-CoV-2","GCATAATTGTTAGGTA",7,110.55,10.65,-0.18,0.03,2.97,1.05,0,">1 nonsynonymous","Y39S V115E",2
"lib2","SARS-CoV-2","GCATAATTTACAAATA",6,9.17,6,-4.84,2,3,1.03,0,">1 nonsynonymous","A14D T55N P82R F99W A105V N118G",6
"lib2","SARS-CoV-2","GCATACAAACATGATG",3,72.09,8.48,-2.35,0.35,1.5,1,0.07,">1 nonsynonymous","L57S G83L N120C P149N",4
"lib2","SARS-CoV-2","GCATACAACCCCTCGC",14,149.92,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19W F44I G51F F134G I142S R179C",6
"lib2","SARS-CoV-2","GCATACAACCGGACCG",6,109.21,7.93,-2.91,0.28,1.5,1.03,0.03,">1 nonsynonymous","V37I E76A Y121N",3
"lib2","SARS-CoV-2","GCATACAAGTAAACGA",11,153.04,9.05,-1.78,0.06,2.02,1.09,0,">1 nonsynonymous","N13W D34S Y39I V77L K87L",5
"lib2","SARS-CoV-2","GCATACAATCCCCTAT",4,54.85,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y93G G116F R136L N157V",4
"lib2","SARS-CoV-2","GCATACAATGCCCTCC",10,44.25,10.64,-0.19,0.05,2.85,1.02,0,"1 nonsynonymous","A42C",1
"lib2","SARS-CoV-2","GCATACAGAAACTTAC",1,54.32,10.7,-0.14,0.08,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATACAGGATAATAA",1,21.54,10.96,0.13,0.07,2.97,1.03,0,"1 nonsynonymous","T201D",1
"lib2","SARS-CoV-2","GCATACATGGAAAGCA",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F C31A F167E",3
"lib2","SARS-CoV-2","GCATACCCCGCTCGTG",2,18.95,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y91Q V103Q S139P",3
"lib2","SARS-CoV-2","GCATACCCTCTTAATA",5,10.84,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T55S T85M Y93R",3
"lib2","SARS-CoV-2","GCATACCCTTAGACAC",14,66.69,6.1,-4.73,0.77,1.5,1.21,0.01,">1 nonsynonymous","C49S T85N T170W L188H",4
"lib2","SARS-CoV-2","GCATACCTCAAGCGAA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","A14D S19* V103Q F160A",4
"lib2","SARS-CoV-2","GCATACGATACAACCG",8,74.66,9.59,-1.25,0.08,2.83,1.01,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","GCATACGTTGAACAGA",2,33.58,10.85,0.02,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATACTAAGAACTAA",4,61.73,10.17,-0.66,0.07,2.61,1.07,0,">1 nonsynonymous","I2W V77R L122T",3
"lib2","SARS-CoV-2","GCATACTACAGCTGAA",1,22.31,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A33K C150S",2
"lib2","SARS-CoV-2","GCATACTATCTATAGG",1,7.72,9.5,-1.34,0.21,2.19,1.02,0.02,">1 nonsynonymous","F8Y L60S D98L G146S",4
"lib2","SARS-CoV-2","GCATACTCACGTAGAG",1,43.23,10.78,-0.05,0.07,2.94,1.09,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","GCATACTCCAACAACT",2,114.45,10.84,0,0.07,2.93,1.09,0,">1 nonsynonymous","A33W T100R",2
"lib2","SARS-CoV-2","GCATACTGCCCCAAGC",8,17.62,7.82,-3.02,0.47,1.5,1.02,0.07,">1 nonsynonymous","A42P D90G P161V",3
"lib2","SARS-CoV-2","GCATACTGTTCGGCAG",9,139.24,9.8,-1.04,0.05,2.21,1.07,0,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","GCATACTGTTTTTTGT",1,9.51,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","R27L S43V G74V D98L G146H R179H",6
"lib2","SARS-CoV-2","GCATACTTTGTGCGAT",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V T140I",2
"lib2","SARS-CoV-2","GCATAGAAAGTGAACA",2,24.51,8.13,-2.71,0.26,1.52,1.03,0.03,">1 nonsynonymous","S113P L125S",2
"lib2","SARS-CoV-2","GCATAGAAATTTGGTA",2,15.81,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L95D I104M N109L K132R",4
"lib2","SARS-CoV-2","GCATAGAACATAAGTA",2,23.25,10.73,-0.1,0.04,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATAGAATTAAACGG",1,21.34,10.27,-0.57,0.1,2.6,1.07,0.01,"1 nonsynonymous","V65H",1
"lib2","SARS-CoV-2","GCATAGACAATCCATG",6,37.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N K94L T201S",3
"lib2","SARS-CoV-2","GCATAGACCCAATCGG",1,8.4,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","R27M C49Y D59M T100S P149F V173E",6
"lib2","SARS-CoV-2","GCATAGACTTAGTAAA",3,37.25,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6E F17N Y39R Y91T",4
"lib2","SARS-CoV-2","GCATAGATAGGGGTCT",1,9.67,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","L38T A81G E186F",3
"lib2","SARS-CoV-2","GCATAGCAATAAATAA",2,36.2,6.03,-4.81,0.68,1.5,1.15,0.01,">1 nonsynonymous","G9F G83F D112G Y119F P133R G174N",6
"lib2","SARS-CoV-2","GCATAGCAGTTTATTA",3,23.41,9.03,-1.8,0.23,1.63,1.04,0.03,">1 nonsynonymous","K26G V52T",2
"lib2","SARS-CoV-2","GCATAGCCGACCATAC",5,2.37,NA,NA,NA,NA,NA,NA,"stop","T63P D98* V115H R136E",4
"lib2","SARS-CoV-2","GCATAGCTATCCCACG",18,102.94,7.52,-3.31,0.29,1.5,1.13,0.03,">1 nonsynonymous","F8I L95P K114A Y123F",4
"lib2","SARS-CoV-2","GCATAGCTCCAAGACC",5,21.96,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V65E D112L Y165T G174W",4
"lib2","SARS-CoV-2","GCATAGGAGAAAACGC",14,131.25,8.89,-1.95,0.16,1.5,1.09,0.01,">1 nonsynonymous","V32E I88T K198Y",3
"lib2","SARS-CoV-2","GCATAGGAGCTAAAGT",5,69.88,9.92,-0.91,0.08,2.57,1.05,0,">1 nonsynonymous","D34Y F62V",2
"lib2","SARS-CoV-2","GCATAGGGCGAAGTCA",4,18.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V11S L131N",2
"lib2","SARS-CoV-2","GCATAGTAAAAAAAAT",4,0.03,NA,NA,NA,NA,NA,NA,"stop","F17* A81N",2
"lib2","SARS-CoV-2","GCATAGTAAATAGACG",5,1.95,NA,NA,NA,NA,NA,NA,"stop","G9L A89*",2
"lib2","SARS-CoV-2","GCATAGTAAGTTAGCT",3,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L I104S",2
"lib2","SARS-CoV-2","GCATAGTACTGTATCT",2,0,NA,NA,NA,NA,NA,NA,"stop","V37F C61* G117K R127Q",4
"lib2","SARS-CoV-2","GCATAGTATGACACAT",6,46.36,10.78,-0.06,0.07,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATAGTTAGTCCCGG",17,281.02,10.82,-0.02,0.05,2.93,1.09,0,"1 nonsynonymous","Q84S",1
"lib2","SARS-CoV-2","GCATAGTTCACGACCT",3,18.89,7.16,-3.68,0.33,1.5,1.04,0.04,">1 nonsynonymous","Y21R K132Q",2
"lib2","SARS-CoV-2","GCATAGTTTTCGGGAT",4,16.18,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F70E D90N G117D K132T T140I G155I G166E K198S",8
"lib2","SARS-CoV-2","GCATATAAAATCCCGT",6,115.3,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35A A42G G51I G83S Y119L",5
"lib2","SARS-CoV-2","GCATATAAACCTTTCT",4,88.59,10.48,-0.36,0.05,2.96,1.04,0,">1 nonsynonymous","N4S V180C",2
"lib2","SARS-CoV-2","GCATATAAACTTGATT",4,27.51,10.09,-0.75,0.08,2.77,1.02,0,">1 nonsynonymous","R16H Y21W V77L Y123S",4
"lib2","SARS-CoV-2","GCATATAACCATTAAT",10,50.7,6.41,-4.43,0.84,1.5,1.25,0.05,">1 nonsynonymous","S41L V103N G174V",3
"lib2","SARS-CoV-2","GCATATAATTCCCCCA",5,152.42,10.43,-0.4,0.05,2.91,1.05,0,">1 nonsynonymous","S36K V65F",2
"lib2","SARS-CoV-2","GCATATAGAATAAGCG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","K56N C61V A89D W106*",4
"lib2","SARS-CoV-2","GCATATAGGGAGGTAA",15,253.85,10.83,-0.01,0.05,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCATATAGGGGGGATC",3,45.55,6.54,-4.3,0.51,1.5,1.2,0.03,">1 nonsynonymous","Y39S A81L A105S N151Y F156V V173D",6
"lib2","SARS-CoV-2","GCATATATAACAGGCG",3,33.05,10.78,-0.05,0.05,3,1.04,0,">1 nonsynonymous","G83Y T201A",2
"lib2","SARS-CoV-2","GCATATATTTCATAAA",1,1.45,NA,NA,NA,NA,NA,NA,"stop","N4R L38* G74A R179M",4
"lib2","SARS-CoV-2","GCATATCACAATAAAG",6,1.24,NA,NA,NA,NA,NA,NA,"stop","D68V G74*",2
"lib2","SARS-CoV-2","GCATATCCACAATTCC",13,109.11,6.02,-4.81,0.67,1.5,1.18,0.01,">1 nonsynonymous","F12D P82H A89L",3
"lib2","SARS-CoV-2","GCATATCCCCTAGAGG",8,49.59,6.17,-4.67,0.77,1.5,1.21,0.02,">1 nonsynonymous","C6A D98N V103L",3
"lib2","SARS-CoV-2","GCATATCTTTTACGGT",1,16.27,10.1,-0.74,0.13,2.78,1.11,0.01,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","GCATATGATTGAAAAA",4,139.53,10.46,-0.37,0.04,2.86,1.07,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","GCATATGTCCCTAGAT",7,146.05,9.28,-1.56,0.06,2.97,1.08,0,">1 nonsynonymous","L5V Y119M",2
"lib2","SARS-CoV-2","GCATATTAACAAAAAA",10,126.18,9.87,-0.97,0.06,2.34,1.04,0,">1 nonsynonymous","D34G S41G",2
"lib2","SARS-CoV-2","GCATATTCACTACTTA",4,0.36,NA,NA,NA,NA,NA,NA,"stop","I28R V37S L60T L125* F134Y",5
"lib2","SARS-CoV-2","GCATATTCCTAACATG",4,45.01,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y35R E154N P161R",3
"lib2","SARS-CoV-2","GCATATTCGCATTGCG",3,2.37,NA,NA,NA,NA,NA,NA,"stop","Y35P N92* G152V P177E",4
"lib2","SARS-CoV-2","GCATATTGATACTTGT",2,50.74,10.75,-0.09,0.03,2.99,1.02,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","GCATATTTTAATAATG",1,9.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V A42F S69K L95P N130S S147T N151R",7
"lib2","SARS-CoV-2","GCATCAAAATTGAGGA",11,70.72,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4R A33R E154I G174L V182Y",5
"lib2","SARS-CoV-2","GCATCAAACTTAGCTG",1,104.39,9.73,-1.1,0.05,2.36,1.05,0,">1 nonsynonymous","N13Y T55G V173G",3
"lib2","SARS-CoV-2","GCATCAACAAATTAAT",3,69.75,10.43,-0.41,0.07,2.83,1.04,0,"1 nonsynonymous","E186I",1
"lib2","SARS-CoV-2","GCATCAAGAATTTACG",2,39.09,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9N Q79T S139C V182M",4
"lib2","SARS-CoV-2","GCATCAAGACAGCCAG",2,72.26,10.55,-0.28,0.04,2.91,1.05,0,">1 nonsynonymous","T3N G116L",2
"lib2","SARS-CoV-2","GCATCAAGCAACATGA",2,8.22,6.47,-4.37,0.49,1.95,1.12,0.01,">1 nonsynonymous","Q84M F99N K199C",3
"lib2","SARS-CoV-2","GCATCAAGGTTGCACA",8,128.1,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37R L60T D90G F167V",4
"lib2","SARS-CoV-2","GCATCAATACGGTTCA",4,63.71,9.9,-0.93,0.09,2.43,1.14,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GCATCAATATCACCGG",7,82.16,9.13,-1.71,0.09,1.69,1.1,0,">1 nonsynonymous","F62Q Y91I N130V",3
"lib2","SARS-CoV-2","GCATCAATCCTCTTTG",8,0.14,NA,NA,NA,NA,NA,NA,"stop","F8M F70N G155* G172R",4
"lib2","SARS-CoV-2","GCATCAATTAACGCAA",4,39.4,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4T Y21F S36N P133E Y165T",5
"lib2","SARS-CoV-2","GCATCACAAAACACTT",2,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L T15P A33P C49P D98E N109L",6
"lib2","SARS-CoV-2","GCATCACATTTAAAAT",4,13.12,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y50D N92L P133A E141W F185V",5
"lib2","SARS-CoV-2","GCATCACCTAGTACCT",3,17.76,9.96,-0.88,0.06,2.08,1,0,">1 nonsynonymous","A14N S139L P149S",3
"lib2","SARS-CoV-2","GCATCACGGATATCCA",5,83.5,8.75,-2.08,0.11,1.5,1.08,0,">1 nonsynonymous","L5T W23L",2
"lib2","SARS-CoV-2","GCATCACTATAATAAA",3,22.98,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K56S Y91E N120C K132Y",4
"lib2","SARS-CoV-2","GCATCAGCTCCAAGTT",6,75.95,10.97,0.14,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATCAGGTTCCCTAG",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128N P149L",2
"lib2","SARS-CoV-2","GCATCAGTATGATACC",11,48.28,6,-4.84,1.08,1.5,1.14,0.01,">1 nonsynonymous","C6F F44P F62I D90R P133S",5
"lib2","SARS-CoV-2","GCATCATAAAAAGAAT",2,21.12,8.95,-1.88,0.19,1.66,1.26,0.01,">1 nonsynonymous","N1G S41F P82K",3
"lib2","SARS-CoV-2","GCATCATTATAAGCGT",2,4.1,NA,NA,NA,NA,NA,NA,"stop","Y35H V115* P133C",3
"lib2","SARS-CoV-2","GCATCATTATTACACG",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R A105S G146Y G174K E186C",5
"lib2","SARS-CoV-2","GCATCATTCGATGTTC",11,152.56,10.34,-0.49,0.03,2.98,1.04,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","GCATCATTTAATCTTT",3,13.13,7.39,-3.44,0.36,1.5,1.25,0.06,">1 nonsynonymous","S41I Y50N",2
"lib2","SARS-CoV-2","GCATCCAACTTAGGAC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib2","SARS-CoV-2","GCATCCACAAATAACG",6,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95T",1
"lib2","SARS-CoV-2","GCATCCAGATAAGCTA",2,2.63,NA,NA,NA,NA,NA,NA,"stop","A67D D98V Q168*",3
"lib2","SARS-CoV-2","GCATCCAGTCTGCTCG",7,8.59,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C102G Y159M P197G",3
"lib2","SARS-CoV-2","GCATCCATGACATAAC",4,20.51,9.98,-0.86,0.17,2.22,1.11,0.02,">1 nonsynonymous","G9L W23L",2
"lib2","SARS-CoV-2","GCATCCATGTCTAAAC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","G9* C31T L111V",3
"lib2","SARS-CoV-2","GCATCCATGTTGAATA",4,62.21,10.56,-0.28,0.06,2.96,1,0,">1 nonsynonymous","E141I V173F",2
"lib2","SARS-CoV-2","GCATCCCAATACACAG",11,160.23,9.18,-1.66,0.03,2.92,1.09,0,">1 nonsynonymous","L5S G117V Y119D",3
"lib2","SARS-CoV-2","GCATCCCGAAACCCGG",1,28.69,9.42,-1.42,0.17,1.72,1.16,0.01,">1 nonsynonymous","I2G R16T N24W V37N T140L P149A",6
"lib2","SARS-CoV-2","GCATCCCTAGATTCTG",2,69.52,10.27,-0.56,0.04,2.82,1.05,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","GCATCCGAAACTTACT",3,50.56,10.86,0.03,0.05,2.95,1.02,0,">1 nonsynonymous","T55Y V173F",2
"lib2","SARS-CoV-2","GCATCCGAAAGGAAAT",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GCATCCGAGAAGTTGG",14,105.27,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","R25K D98Y V115H F126M",4
"lib2","SARS-CoV-2","GCATCCTTGTAAATAT",7,72.54,10.81,-0.03,0.06,2.89,1.13,0,"1 nonsynonymous","K199E",1
"lib2","SARS-CoV-2","GCATCGAAGTACAATA",4,0.12,NA,NA,NA,NA,NA,NA,"stop","N4Q Q79L Y121*",3
"lib2","SARS-CoV-2","GCATCGACGAAGCTGC",2,40.98,6,-4.84,2,1.5,1.19,0.03,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","GCATCGAGCAACCTCA",6,62.21,6,-4.84,1.51,1.5,1.13,0.02,">1 nonsynonymous","G9T Y35G K48L P82S Y119H C158G V173T",7
"lib2","SARS-CoV-2","GCATCGCTCCCCGGAT",4,33.72,10.22,-0.61,0.1,2.59,1.04,0,">1 nonsynonymous","T3R E10Q K128L S147L",4
"lib2","SARS-CoV-2","GCATCGGCCTAACCCT",2,38.92,10.81,-0.03,0.06,2.95,1.08,0,">1 nonsynonymous","L5K T201L",2
"lib2","SARS-CoV-2","GCATCGGGAAGTGCAC",12,115.87,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N1C G9M F44R C61N P82A K87P Y121C R136C",8
"lib2","SARS-CoV-2","GCATCGTAACTTCGAA",7,121.97,10.58,-0.26,0.03,2.9,1.12,0,"1 nonsynonymous","G174A",1
"lib2","SARS-CoV-2","GCATCGTAAGCAACAC",1,32.87,10.1,-0.74,0.06,3,1.02,0,">1 nonsynonymous","E141S Q168T",2
"lib2","SARS-CoV-2","GCATCGTAATCAACGA",8,128.19,8.79,-2.05,0.05,2.99,1.06,0,"1 nonsynonymous","N157M",1
"lib2","SARS-CoV-2","GCATCGTACCAACATA",1,59.9,8.22,-2.62,0.18,1.98,1.08,0.01,">1 nonsynonymous","T15K G146I",2
"lib2","SARS-CoV-2","GCATCTAAATCCGAAA",5,45.92,10.53,-0.31,0.11,2.79,1,0,">1 nonsynonymous","P7K S164C",2
"lib2","SARS-CoV-2","GCATCTAACCCTTGCG",1,11.16,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N40F V103M T170V",3
"lib2","SARS-CoV-2","GCATCTAAGGCCTGAC",1,10.84,10.89,0.06,0.11,2.81,1.21,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCATCTAGATACTAAA",12,74.69,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F17S Y91D A105Y",3
"lib2","SARS-CoV-2","GCATCTAGGTACTAAC",1,9.22,8.67,-2.17,0.23,2.81,1.01,0.01,">1 nonsynonymous","E10S N171R",2
"lib2","SARS-CoV-2","GCATCTAGTGATAGTG",2,20.68,6,-4.84,2,3,1.11,0,">1 nonsynonymous","P54G E76V R136C V153S P197T",5
"lib2","SARS-CoV-2","GCATCTATTCCCAGCT",3,50.62,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S53Q G83P A145I",3
"lib2","SARS-CoV-2","GCATCTCACGAAAAAA",8,109.35,10.57,-0.27,0.04,2.94,1.05,0,">1 nonsynonymous","G155C Y175W",2
"lib2","SARS-CoV-2","GCATCTCCACATAATG",9,188.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G101F K114T R124V",3
"lib2","SARS-CoV-2","GCATCTCTACCGTAGG",1,13.76,6.91,-3.93,0.36,1.5,1.05,0.03,">1 nonsynonymous","E10S C61D G146K N151H Y178C",5
"lib2","SARS-CoV-2","GCATCTCTTTTATAAA",24,321.22,10.13,-0.71,0.03,2.75,1.03,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","GCATCTGATTGAGTTT",4,29.52,7.72,-3.11,0.17,1.5,1.09,0.01,">1 nonsynonymous","F8Q K26S I138G",3
"lib2","SARS-CoV-2","GCATCTGCATGATAAA",6,66.92,6.54,-4.29,0.53,1.5,1.2,0.03,">1 nonsynonymous","Y93M P149D",2
"lib2","SARS-CoV-2","GCATCTGTAAACACCA",4,87.2,10.68,-0.16,0.04,2.85,1.09,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","GCATCTTAAATCGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* P96S V115F F156A Q176L",5
"lib2","SARS-CoV-2","GCATCTTTAACTATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95S Q176R",2
"lib2","SARS-CoV-2","GCATGAAAAGATAACC",5,13.92,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A42L F99G F134Q C195F",4
"lib2","SARS-CoV-2","GCATGAAAGGTCGATT",2,122.7,10.58,-0.25,0.03,3,1.01,0,"1 nonsynonymous","T140W",1
"lib2","SARS-CoV-2","GCATGAAATAAGACGC",17,2754.23,10.79,-0.04,0.03,2.98,1.04,0,"1 nonsynonymous","R27T",1
"lib2","SARS-CoV-2","GCATGAAATATCCTCA",6,205.34,10.79,-0.04,0.02,2.89,1.09,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","GCATGAAATTACGTCC",1,103.9,9.76,-1.08,0.05,2.83,1.06,0,">1 nonsynonymous","D97I G146N",2
"lib2","SARS-CoV-2","GCATGAACAAACTTAT",3,130.41,10.85,0.01,0.05,2.96,1.05,0,"1 nonsynonymous","Y178F",1
"lib2","SARS-CoV-2","GCATGAAGACACTAAC",3,25.39,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T100K S108H Y119Q P149L L162A",5
"lib2","SARS-CoV-2","GCATGAAGCCCAGCGG",5,38.87,9.12,-1.72,0.1,1.76,1.07,0,">1 nonsynonymous","A18K N58K Y93F",3
"lib2","SARS-CoV-2","GCATGAATCTACAATA",6,35.32,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D34R L60N D75G G86C C158M",5
"lib2","SARS-CoV-2","GCATGACAAAAGTATT",5,84.5,10.04,-0.8,0.06,2.46,1.07,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","GCATGACAATGAAAAA",2,39.35,10.95,0.12,0.06,2.99,1.02,0,"1 nonsynonymous","N130V",1
"lib2","SARS-CoV-2","GCATGACCCATCCACG",5,108.23,10.5,-0.34,0.06,2.98,1.02,0,">1 nonsynonymous","E10R A33L",2
"lib2","SARS-CoV-2","GCATGACCCCACGAAA",5,67.43,8.39,-2.45,0.17,1.55,1.14,0.01,">1 nonsynonymous","V11Y Y39C F62Q T85V K114R",5
"lib2","SARS-CoV-2","GCATGACCCTGCCTTT",7,2.05,NA,NA,NA,NA,NA,NA,"stop","E10*",1
"lib2","SARS-CoV-2","GCATGACGACGAATAG",2,66.48,10.6,-0.23,0.16,2.42,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCATGACGAGTATAAG",5,37.15,8.04,-2.79,0.2,1.5,1.14,0.01,">1 nonsynonymous","N4I S41G D90S G155R",4
"lib2","SARS-CoV-2","GCATGACGTCCCAACT",2,12.22,9.31,-1.53,0.19,2.04,1,0.01,">1 nonsynonymous","P7I V11Y S29L",3
"lib2","SARS-CoV-2","GCATGACTAACTTTTT",3,80.6,9.83,-1.01,0.07,2.78,1.14,0,">1 nonsynonymous","Y121K T148A",2
"lib2","SARS-CoV-2","GCATGAGAAAAGATAT",1,48.75,9.21,-1.63,0.09,2.87,1.05,0,">1 nonsynonymous","F62R Y119S G166V",3
"lib2","SARS-CoV-2","GCATGAGATTATGCTA",2,16.97,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","E135V T140M C150G",3
"lib2","SARS-CoV-2","GCATGATAAACTTTAA",7,87.09,8.95,-1.88,0.07,2.41,1.05,0,">1 nonsynonymous","R73P G83S",2
"lib2","SARS-CoV-2","GCATGATAATGTTGGA",9,0.48,NA,NA,NA,NA,NA,NA,"stop","E10V L95* T100D",3
"lib2","SARS-CoV-2","GCATGATATGGGTCGG",10,109.68,10.35,-0.49,0.04,2.89,1.08,0,"1 nonsynonymous","R25H",1
"lib2","SARS-CoV-2","GCATGATCTATAATGA",12,196.68,9.54,-1.3,0.06,2.02,1.03,0,">1 nonsynonymous","F12A V32H",2
"lib2","SARS-CoV-2","GCATGATGGAGAGGAG",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R D59P G174M",3
"lib2","SARS-CoV-2","GCATGATTCCCTCATA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","S36* P133F Q163R G172P",4
"lib2","SARS-CoV-2","GCATGATTTTAATACC",1,5.57,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V103Y T201Y",2
"lib2","SARS-CoV-2","GCATGCAATTGCTAAT",5,103.03,10.85,0.01,0.06,2.91,1.09,0,"1 nonsynonymous","A18N",1
"lib2","SARS-CoV-2","GCATGCACTCGCAGGA",7,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y D90N V103L N130W T170C",5
"lib2","SARS-CoV-2","GCATGCATCAGAAACC",4,8.18,11.22,0.39,0.23,2.86,1,0.01,">1 nonsynonymous","C6V F99L Y178S",3
"lib2","SARS-CoV-2","GCATGCATTAAGATAC",1,18.42,10.97,0.13,0.08,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCATGCATTGAAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S S45* D137V Y175F S200F",5
"lib2","SARS-CoV-2","GCATGCCAGAGACCTA",4,0.17,NA,NA,NA,NA,NA,NA,"stop","A18V S19* V173I",3
"lib2","SARS-CoV-2","GCATGCCAGCACCAAA",4,37.96,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5Q Y93V",2
"lib2","SARS-CoV-2","GCATGCCCCCATGGCC",14,291.17,8.83,-2,0.06,2.36,1.07,0,">1 nonsynonymous","C6S A22H G174H",3
"lib2","SARS-CoV-2","GCATGCCCTTCACTCC",8,91.33,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T15Q N40P L60T F99Y A105R",5
"lib2","SARS-CoV-2","GCATGCGCTATACATT",7,150.35,7.82,-3.01,0.14,2.44,1.12,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","GCATGCGGCATAAGCT",2,11.74,10.15,-0.68,0.15,2.03,1,0.01,">1 nonsynonymous","A89H I104M",2
"lib2","SARS-CoV-2","GCATGCGGGGCGTATA",5,34.03,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13G C150T Y165V",3
"lib2","SARS-CoV-2","GCATGGACACAGCGGG",2,40.39,10.74,-0.1,0.06,2.97,1.04,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","GCATGGAGAACCTACA",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134A Y159T",2
"lib2","SARS-CoV-2","GCATGGATATACTAAT",4,204,10.61,-0.22,0.03,2.98,1.05,0,">1 nonsynonymous","P7Y A42Q",2
"lib2","SARS-CoV-2","GCATGGATTCAACAGC",8,2.32,NA,NA,NA,NA,NA,NA,"stop","V52I W106* L122P T201I",4
"lib2","SARS-CoV-2","GCATGGCCGGTAAATG",5,44.73,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S45V C61Y T85N S108P T140A G146R",6
"lib2","SARS-CoV-2","GCATGGCGGGACAACT",5,112.23,9.15,-1.69,0.07,2.88,1.04,0,">1 nonsynonymous","V115S A145L",2
"lib2","SARS-CoV-2","GCATGGGATACCAATC",12,18.29,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","D34S D98S V103Y K198R",4
"lib2","SARS-CoV-2","GCATGGGCCCCGTAAT",3,38.07,8.96,-1.88,0.07,2.76,1.07,0,">1 nonsynonymous","N107D G174D",2
"lib2","SARS-CoV-2","GCATGGGGTGTGCCCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S53Y T85F N110* G117Q",4
"lib2","SARS-CoV-2","GCATGGTGTTGCACAA",16,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R Y93S L131G",3
"lib2","SARS-CoV-2","GCATGGTTAATGTAAT",5,0.44,NA,NA,NA,NA,NA,NA,"stop","A89V Y121R I138C Q176*",4
"lib2","SARS-CoV-2","GCATGTAAACGAAAAG",1,12.32,10.05,-0.79,0.14,2.63,1.02,0.01,"1 nonsynonymous","F47K",1
"lib2","SARS-CoV-2","GCATGTAACAATGAAA",5,20.56,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S45T Y93R K132C V153K P169R",5
"lib2","SARS-CoV-2","GCATGTACGAATACAT",4,0.69,NA,NA,NA,NA,NA,NA,"stop","T15G V77* N110Y",3
"lib2","SARS-CoV-2","GCATGTATACCATACA",6,40.34,6.14,-4.69,1.07,1.5,1.28,0.03,">1 nonsynonymous","E10I W23F S41R A89M S184W",5
"lib2","SARS-CoV-2","GCATGTATACTATAAG",4,112.23,10.6,-0.24,0.03,2.9,1.07,0,">1 nonsynonymous","L60R G116N",2
"lib2","SARS-CoV-2","GCATGTATGACTTCGC",12,125.68,10.06,-0.78,0.03,2.79,1.04,0,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","GCATGTATTTATCAAC",4,32.71,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","C6F T15G D68G C150A G166W",5
"lib2","SARS-CoV-2","GCATGTCAACAATGCG",5,16.55,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V103R S113Q",2
"lib2","SARS-CoV-2","GCATGTCAACGGAGTC",3,33.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27S Y143G G152L",3
"lib2","SARS-CoV-2","GCATGTCAGACAATCG",5,85.26,10.91,0.07,0.06,2.99,1.01,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","GCATGTCATGAACGAA",9,55.44,10.16,-0.68,0.04,2.82,1.09,0,">1 nonsynonymous","A14D N58S",2
"lib2","SARS-CoV-2","GCATGTGAGAAACGAC",6,0.09,NA,NA,NA,NA,NA,NA,"stop","V103* S108H N151I",3
"lib2","SARS-CoV-2","GCATGTGAGACCAAAG",1,35.94,10.8,-0.03,0.04,3,1.03,0,">1 nonsynonymous","V37Q N110V T201K",3
"lib2","SARS-CoV-2","GCATGTGATAAACTCG",4,36.45,6.45,-4.39,0.54,1.5,1.2,0.03,">1 nonsynonymous","W23S F62S",2
"lib2","SARS-CoV-2","GCATGTGGACCAGGTG",4,2.59,NA,NA,NA,NA,NA,NA,"stop","Y21W N64Q I142M T148K C150*",5
"lib2","SARS-CoV-2","GCATGTTATACGGGGC",4,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N G101D K114M",3
"lib2","SARS-CoV-2","GCATTAAAAACCTTCG",1,59.6,10.06,-0.78,0.07,2.61,1.02,0,">1 nonsynonymous","F12L E141L",2
"lib2","SARS-CoV-2","GCATTAAAAATCTTAG",2,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R Q84K F160Y",3
"lib2","SARS-CoV-2","GCATTAAAATAACCAT",7,447.64,9.54,-1.29,0.04,1.87,1.06,0,">1 nonsynonymous","Y35L A81N Y178T",3
"lib2","SARS-CoV-2","GCATTAAACACACATA",4,5.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L38Y G83P",2
"lib2","SARS-CoV-2","GCATTAAACAGCAGAA",12,78.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99H A105S N171K",3
"lib2","SARS-CoV-2","GCATTAAAGATAACCC",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R K132E I142F P149H T201L",5
"lib2","SARS-CoV-2","GCATTAAATCTAGTAA",9,147.79,8.72,-2.12,0.06,1.95,1.09,0,">1 nonsynonymous","N107Q K132R Y143H",3
"lib2","SARS-CoV-2","GCATTAACATAAGGAA",5,17.77,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A18E A81T P96L Y123V",4
"lib2","SARS-CoV-2","GCATTAACATAATAAT",5,0.76,NA,NA,NA,NA,NA,NA,"stop","W23E D68* V77D N157T Y165M L183W",6
"lib2","SARS-CoV-2","GCATTAACATTAGTTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L L57F T63N T85F G152C",5
"lib2","SARS-CoV-2","GCATTAACCAGCTTCA",4,69.3,10.66,-0.18,0.05,2.92,1.06,0,">1 nonsynonymous","L122H N130D F160V",3
"lib2","SARS-CoV-2","GCATTAACCATTAACC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","I88W T140V C158H T201*",4
"lib2","SARS-CoV-2","GCATTAACCGGCAGCT",1,4.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCATTAACGACAAAAT",7,106.28,10.84,0,0.04,3,1.03,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","GCATTAACGGATTGTA",7,1.86,NA,NA,NA,NA,NA,NA,"stop","G51S L60V E154Y G155S T170*",5
"lib2","SARS-CoV-2","GCATTAACGGTATACA",1,13.04,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F99Y N107Y",2
"lib2","SARS-CoV-2","GCATTAACTAAATTAT",12,174.68,9.99,-0.85,0.02,2.78,1.04,0,">1 nonsynonymous","A33T Y121M",2
"lib2","SARS-CoV-2","GCATTAAGAAAAAAAC",8,0.63,NA,NA,NA,NA,NA,NA,"stop","Y35W F44A T55* L95I T193I",5
"lib2","SARS-CoV-2","GCATTAAGAAAAAGAT",3,13.23,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","N1Q A14G N40T F99I K128E G174S",6
"lib2","SARS-CoV-2","GCATTAAGTACACTAT",3,23.39,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6G P54L D137R Q144V L162M",5
"lib2","SARS-CoV-2","GCATTAATAAACAGCT",10,100.76,10.73,-0.11,0.04,2.97,1.05,0,">1 nonsynonymous","G9R N64S",2
"lib2","SARS-CoV-2","GCATTAATAAATGAAT",9,116.54,10.59,-0.24,0.04,2.99,1.03,0,">1 nonsynonymous","S36R S139K K199T",3
"lib2","SARS-CoV-2","GCATTAATCGTCCCAT",5,44.01,6.29,-4.55,0.54,1.5,1.16,0.01,">1 nonsynonymous","L38N Y91R D97K G146S",4
"lib2","SARS-CoV-2","GCATTAATTATGTTTG",1,34.32,6.42,-4.41,0.52,1.5,1.16,0.02,">1 nonsynonymous","A33E C49L L122I T140S F160G",5
"lib2","SARS-CoV-2","GCATTAATTCAAAGGA",4,23.58,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S41R W106T E135P",3
"lib2","SARS-CoV-2","GCATTACAACCAACAC",2,422.18,9.32,-1.52,0.05,2.09,1.05,0,">1 nonsynonymous","Q79R A89S V173D",3
"lib2","SARS-CoV-2","GCATTACAAGATAGTT",11,81.02,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S19K G51S A89D P197R",4
"lib2","SARS-CoV-2","GCATTACACATCTATG",8,109.79,10.28,-0.56,0.05,2.87,1.05,0,"1 nonsynonymous","R136S",1
"lib2","SARS-CoV-2","GCATTACATACTAGCT",1,74.36,10.38,-0.46,0.04,2.9,1.04,0,">1 nonsynonymous","D34S D97L",2
"lib2","SARS-CoV-2","GCATTACCAAAAGGGG",3,111.88,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","I138G C158R",2
"lib2","SARS-CoV-2","GCATTACCACGATTGA",5,17.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17V D90Y G174L",3
"lib2","SARS-CoV-2","GCATTACCTGAAACCT",10,118.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F12H Y39M G155C S164L Q176P T201S",6
"lib2","SARS-CoV-2","GCATTACGACCAAGGT",10,208.44,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F12E R78C G116V K128Y Y143I P177S",6
"lib2","SARS-CoV-2","GCATTACGATGAATAT",6,128.06,10.3,-0.53,0.04,2.84,1.07,0,">1 nonsynonymous","V77L K94N T100F",3
"lib2","SARS-CoV-2","GCATTACTGAACGCTG",1,9.47,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A22M L60I G86I",3
"lib2","SARS-CoV-2","GCATTAGAGATGCCAA",10,228.32,9.95,-0.89,0.05,2.67,1.04,0,">1 nonsynonymous","V103I G152C K198T",3
"lib2","SARS-CoV-2","GCATTAGCGTTTTATA",9,0.97,NA,NA,NA,NA,NA,NA,"stop","L60* K94R L162Q",3
"lib2","SARS-CoV-2","GCATTAGCTAACCATT",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K R127L",2
"lib2","SARS-CoV-2","GCATTAGTCATTCCAT",1,9.49,10.76,-0.07,0.05,2.94,1.02,0,">1 nonsynonymous","T63L K128P",2
"lib2","SARS-CoV-2","GCATTATAAAAAATAG",3,37.56,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F70E P133I N157I V173Q",4
"lib2","SARS-CoV-2","GCATTATAACTATCAC",11,245.75,10.59,-0.25,0.03,2.94,1.03,0,">1 nonsynonymous","N4S S41P",2
"lib2","SARS-CoV-2","GCATTATAAGCGATTG",9,106.56,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A42R D112L Y123T Y165S R179A",5
"lib2","SARS-CoV-2","GCATTATATATTTTCA",9,209.95,7.46,-3.37,0.22,1.5,1.06,0.01,">1 nonsynonymous","E10Y G166P",2
"lib2","SARS-CoV-2","GCATTATATGCACGTG",2,11.32,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P54H G86R D112Q Y119V",4
"lib2","SARS-CoV-2","GCATTATCTAGTTACA",2,19.15,10.73,-0.11,0.08,2.75,1.21,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","GCATTATTAAATGGTA",8,86.04,9.23,-1.6,0.07,2.88,1.13,0,">1 nonsynonymous","D97N Y119D",2
"lib2","SARS-CoV-2","GCATTATTACGGATCC",16,167.63,10.35,-0.49,0.03,2.9,1.05,0,"1 nonsynonymous","G152W",1
"lib2","SARS-CoV-2","GCATTCAAAAGGAGTA",3,72.67,8.54,-2.29,0.08,2.69,1.1,0,">1 nonsynonymous","V37C D90Q Y119L P149S",4
"lib2","SARS-CoV-2","GCATTCAAGAGACTGT",1,31.89,10.89,0.05,0.08,3,1.04,0,"1 nonsynonymous","K128Q",1
"lib2","SARS-CoV-2","GCATTCAATATCTTTA",1,44.72,8.8,-2.04,0.07,3,1.06,0,">1 nonsynonymous","K87T E154Y",2
"lib2","SARS-CoV-2","GCATTCAATTAGTCGC",5,13.15,NA,NA,NA,NA,NA,NA,"stop","D68* Y143W V173H",3
"lib2","SARS-CoV-2","GCATTCACCTAATCAA",11,85.55,9.42,-1.41,0.09,1.68,1.13,0,">1 nonsynonymous","V77M G83I T201A",3
"lib2","SARS-CoV-2","GCATTCACGACTATAG",8,49.79,9.63,-1.21,0.09,2.24,1.12,0,">1 nonsynonymous","I2H D90A A105W S200D",4
"lib2","SARS-CoV-2","GCATTCACTAAATGAG",4,0.37,NA,NA,NA,NA,NA,NA,"stop","T15G I88* W106T C158L G174W",5
"lib2","SARS-CoV-2","GCATTCACTGTACAAA",20,286.98,10.98,0.14,0.04,2.96,1.05,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","GCATTCATCAAGAATG",4,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N C61K R127P K132L C158N",5
"lib2","SARS-CoV-2","GCATTCATCATTGCAA",3,84.67,10.64,-0.2,0.03,2.92,1.03,0,">1 nonsynonymous","Y39S T55I",2
"lib2","SARS-CoV-2","GCATTCCAATAGGTAT",9,120.37,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10T D68E Y119L E141K H189Y",5
"lib2","SARS-CoV-2","GCATTCCACAGACGAA",1,15.58,10.88,0.05,0.07,2.98,1.04,0,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","GCATTCCATTACCCAG",5,1.47,NA,NA,NA,NA,NA,NA,"stop","A14* W106I",2
"lib2","SARS-CoV-2","GCATTCCGGTAAGGGA",7,5.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","GCATTCGAACTTTTTA",4,24.84,10.96,0.12,0.06,2.96,1.04,0,">1 nonsynonymous","E141V T201Y",2
"lib2","SARS-CoV-2","GCATTCGACCACATAG",5,36.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99P K114S",2
"lib2","SARS-CoV-2","GCATTCGATAAGTTGA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","E141L P149*",2
"lib2","SARS-CoV-2","GCATTCGCGCTTACCT",4,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103I L131F Y159I",3
"lib2","SARS-CoV-2","GCATTCTAAAGTTGAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCATTCTCTGGAAAAA",5,65.02,9.67,-1.17,0.11,1.98,1.09,0,">1 nonsynonymous","K56E K94L",2
"lib2","SARS-CoV-2","GCATTGAACCCATTTG",4,90.83,10.73,-0.1,0.04,2.95,1.06,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","GCATTGACTTGAGATG",2,22.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V R27L W106G",3
"lib2","SARS-CoV-2","GCATTGAGGAGTTCGA",10,1.42,NA,NA,NA,NA,NA,NA,"stop","G86C T201*",2
"lib2","SARS-CoV-2","GCATTGAGGCCATCCA",1,13.94,NA,NA,NA,NA,NA,0.44,">1 nonsynonymous","G101Y N107Q",2
"lib2","SARS-CoV-2","GCATTGATTACTAAAC",17,164.28,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V77G G166M",2
"lib2","SARS-CoV-2","GCATTGCAAATACGAG",10,233.22,9.06,-1.78,0.04,2.92,1.09,0,">1 nonsynonymous","V115M G117D",2
"lib2","SARS-CoV-2","GCATTGCCAAGTTACC",2,13.35,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6W Y143T",2
"lib2","SARS-CoV-2","GCATTGCCTTAACTCC",5,69.27,6,-4.84,1.83,1.5,1.26,0.02,">1 nonsynonymous","G51F C61A I138S T170W F185I",5
"lib2","SARS-CoV-2","GCATTGCGCAAAATCG",5,42.06,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","D90S R179Q",2
"lib2","SARS-CoV-2","GCATTGCGCCAATACA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5P F156*",2
"lib2","SARS-CoV-2","GCATTGCGTAATTGGC",1,22.97,10.46,-0.37,0.14,2.64,1.29,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCATTGCTAAAGCCAA",1,11.73,9.81,-1.02,0.11,2.21,1,0,">1 nonsynonymous","Y39W W106V",2
"lib2","SARS-CoV-2","GCATTGGTTTGGTAGA",12,172.65,10.71,-0.13,0.03,2.92,1.08,0,"1 nonsynonymous","A18E",1
"lib2","SARS-CoV-2","GCATTGTCCATGAATG",15,206.98,10.84,0,0.05,2.91,1.1,0,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","GCATTGTGCTTGGGTC",17,95.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9A D112Y K128F F160Q F167Y",5
"lib2","SARS-CoV-2","GCATTGTGTTATACAA",4,57.46,10.01,-0.83,0.06,2.61,1.04,0,">1 nonsynonymous","V11H A42Y I104F A192L",4
"lib2","SARS-CoV-2","GCATTGTTAACTTGGT",4,50.66,9.37,-1.46,0.08,1.98,1.03,0,">1 nonsynonymous","N58S W106C S129E T201V",4
"lib2","SARS-CoV-2","GCATTGTTCCTAGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","K94* V103C P133V G152C Q168T V173P",6
"lib2","SARS-CoV-2","GCATTTAAAATTGCCA",4,81.97,10.42,-0.42,0.04,2.9,1.07,0,">1 nonsynonymous","C61P N110K I138F",3
"lib2","SARS-CoV-2","GCATTTAAATGTGTCA",6,40.98,10.73,-0.11,0.03,2.91,1.09,0,"1 nonsynonymous","F160C",1
"lib2","SARS-CoV-2","GCATTTAACGTAAATA",1,32.03,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Q79K R127L",2
"lib2","SARS-CoV-2","GCATTTACAAAACGAC",4,129.6,9.64,-1.2,0.07,1.97,1.1,0,">1 nonsynonymous","L5T A18S G51D Y123H",4
"lib2","SARS-CoV-2","GCATTTAGTGTTCAAT",7,19.41,10.34,-0.5,0.05,2.95,1.01,0,">1 nonsynonymous","L5F L122V G155R",3
"lib2","SARS-CoV-2","GCATTTATCACAAAAC",3,76.27,10.84,0,0.06,2.85,1.14,0,">1 nonsynonymous","T55S T85K",2
"lib2","SARS-CoV-2","GCATTTATGAAGCCAT",2,11.19,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15F G86Y T148F N151P",4
"lib2","SARS-CoV-2","GCATTTCACGGACCTT",8,24.26,9.17,-1.66,0.06,2.04,1.1,0,">1 nonsynonymous","A42H P82G",2
"lib2","SARS-CoV-2","GCATTTCCATGTCTGT",4,80.23,9.75,-1.09,0.07,2.37,1.03,0,">1 nonsynonymous","V37C D90T N151F",3
"lib2","SARS-CoV-2","GCATTTCTATTAAATT",1,30.75,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V32C G86L F156L",3
"lib2","SARS-CoV-2","GCATTTGATGTGATAA",1,57.71,9.56,-1.28,0.1,2.55,1.05,0,">1 nonsynonymous","T15Y K87M D98S",3
"lib2","SARS-CoV-2","GCATTTGATTGGGTGT",1,3.57,NA,NA,NA,NA,NA,NA,"stop","S19E A42* C61W",3
"lib2","SARS-CoV-2","GCATTTGCCTTGCAGA",1,48.05,10.66,-0.17,0.04,2.9,1.08,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","GCATTTGGTCAATCCA",4,14.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8R V11Y K87T L131G T140Y",5
"lib2","SARS-CoV-2","GCATTTGTATACCGTC",2,7.85,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A14V L38S V103D",3
"lib2","SARS-CoV-2","GCATTTGTGACCCTAA",5,27,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T46A V52I D68E F160D",4
"lib2","SARS-CoV-2","GCATTTTAGATAACCA",1,29.53,9.76,-1.08,0.14,2.5,1.09,0.01,">1 nonsynonymous","F160D V173S Y178F A190E",4
"lib2","SARS-CoV-2","GCATTTTATTGAGGTC",16,94.43,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R73M G86P E141K",3
"lib2","SARS-CoV-2","GCATTTTCCACCCTAT",4,109.5,9.82,-1.01,0.04,2.71,1.05,0,">1 nonsynonymous","C6P K199S",2
"lib2","SARS-CoV-2","GCATTTTGATGCCTAA",12,102.58,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P54N C150H",2
"lib2","SARS-CoV-2","GCATTTTTAATGCTTG",1,76.4,10.51,-0.33,0.06,2.96,1.05,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","GCCAAAAAAATTCCGT",2,25.41,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","S43P D90Y Y175T L183I",4
"lib2","SARS-CoV-2","GCCAAAAACGTCAAAA",3,16.33,8.46,-2.37,0.42,1.5,1.06,0.06,">1 nonsynonymous","F17H K128V G166A",3
"lib2","SARS-CoV-2","GCCAAAAAGACATACG",7,64.94,8.53,-2.3,0.09,2,1.09,0,">1 nonsynonymous","R16Y Q84C T100D F156L",4
"lib2","SARS-CoV-2","GCCAAAACCTAGCAGC",3,39.92,9.86,-0.97,0.09,2.41,1.09,0,">1 nonsynonymous","A18N K94M",2
"lib2","SARS-CoV-2","GCCAAAACTGCACTAT",5,32.86,7.44,-3.4,0.19,1.83,1.1,0.01,"1 nonsynonymous","C150A",1
"lib2","SARS-CoV-2","GCCAAAAGACACCTCT",10,92.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35R G172S",2
"lib2","SARS-CoV-2","GCCAAAAGACTATTAT",3,8.36,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A42L D98I N110M F134R G196R",5
"lib2","SARS-CoV-2","GCCAAAAGCCTGTAAA",1,13.81,6,-4.84,2,3,1.03,0,">1 nonsynonymous","S19K G146L",2
"lib2","SARS-CoV-2","GCCAAAAGGACAGTAA",5,62.32,10.29,-0.55,0.08,2.84,1.06,0,">1 nonsynonymous","V37L G83V",2
"lib2","SARS-CoV-2","GCCAAAAGTATAACCA",5,39.35,10.6,-0.24,0.04,2.86,1.13,0,">1 nonsynonymous","V37K C61T N130Y G152N",4
"lib2","SARS-CoV-2","GCCAAAAGTGGGTACT",2,3.4,NA,NA,NA,NA,NA,NA,"stop","S43* T63V I104L G166R",4
"lib2","SARS-CoV-2","GCCAAAATGACCGTAC",6,105.57,9.95,-0.88,0.06,2.13,1,0,">1 nonsynonymous","I2N K94S P149N",3
"lib2","SARS-CoV-2","GCCAAAATGTTCTGGC",8,212.68,8.7,-2.14,0.16,1.5,1,0.01,">1 nonsynonymous","S19V T55N T100K",3
"lib2","SARS-CoV-2","GCCAAACAAATTGCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T T140S S200P",3
"lib2","SARS-CoV-2","GCCAAACAAGACTTCA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7V L95P S184G",3
"lib2","SARS-CoV-2","GCCAAACACACCTTGT",4,4.92,NA,NA,NA,NA,NA,NA,"stop","Y21*",1
"lib2","SARS-CoV-2","GCCAAACAGGACGCCA",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R I88F Y123T",3
"lib2","SARS-CoV-2","GCCAAACCGAATTCCG",4,70.42,9.43,-1.41,0.09,1.75,1.12,0,"1 nonsynonymous","Y50R",1
"lib2","SARS-CoV-2","GCCAAACCTATCACTA",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N C61N",2
"lib2","SARS-CoV-2","GCCAAACGCTAAGTGT",2,0.61,NA,NA,NA,NA,NA,NA,"stop","S36L P197*",2
"lib2","SARS-CoV-2","GCCAAACTAATAGTAA",6,28.99,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","F17K G116Y L125N G146S G155R",5
"lib2","SARS-CoV-2","GCCAAACTCTTTCCAA",1,6.89,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","G51V D90L L162P T201A",4
"lib2","SARS-CoV-2","GCCAAAGAAATGACAA",6,87.07,9,-1.83,0.1,2.03,1.06,0,">1 nonsynonymous","F99H P169S",2
"lib2","SARS-CoV-2","GCCAAAGAATAAGCCA",13,106.63,6,-4.84,1.26,1.5,1.25,0.02,">1 nonsynonymous","V77F G116R N151L",3
"lib2","SARS-CoV-2","GCCAAAGAATGGTATA",3,12.44,8.58,-2.25,0.19,1.98,1.18,0.01,">1 nonsynonymous","T100G I142H",2
"lib2","SARS-CoV-2","GCCAAAGAGGCACTCT",3,29.11,8.56,-2.27,0.18,2.11,1.26,0.02,">1 nonsynonymous","E10F K87D",2
"lib2","SARS-CoV-2","GCCAAAGCCCACCTTT",7,161.82,10.85,0.02,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAAAGTAGTCCTCT",17,204.66,10.42,-0.41,0.03,2.87,1.06,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","GCCAAAGTCTTCCACA",2,14.65,6.51,-4.33,0.53,1.5,1.08,0.03,">1 nonsynonymous","D90C F99V",2
"lib2","SARS-CoV-2","GCCAAAGTTGACGCTA",1,10.77,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","C6Q I88W K94I P149F",4
"lib2","SARS-CoV-2","GCCAAATACCCAATAA",2,50.4,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K94T F134N T170C",3
"lib2","SARS-CoV-2","GCCAAATCGACTCTAG",16,7.58,NA,NA,NA,NA,NA,NA,"stop","A89* S113T S164Y",3
"lib2","SARS-CoV-2","GCCAAATGCCTTGTGT",8,304.85,10.71,-0.12,0.02,2.95,1.06,0,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","GCCAAATTGATCCCTC",7,141.12,10.91,0.08,0.05,2.95,1.06,0,"1 nonsynonymous","N130R",1
"lib2","SARS-CoV-2","GCCAACAAACACAGGT",2,5.56,6.34,-4.5,1.28,1.5,1.03,0,">1 nonsynonymous","N64W G172V",2
"lib2","SARS-CoV-2","GCCAACAAACATATCA",1,112.72,10.76,-0.08,0.03,2.97,1.04,0,">1 nonsynonymous","A14Q E141S",2
"lib2","SARS-CoV-2","GCCAACAAAGTACGCA",3,38.23,8.35,-2.48,0.17,2.45,1.04,0.01,">1 nonsynonymous","S129H Y175L S200V",3
"lib2","SARS-CoV-2","GCCAACAATGTAATTA",2,20.47,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G117S F167K",2
"lib2","SARS-CoV-2","GCCAACACAACCCGCT",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T F126N G146L G155R T170S",5
"lib2","SARS-CoV-2","GCCAACAGGCAAAGGA",13,110.94,6,-4.84,2,3,1.19,0,">1 nonsynonymous","D98G C158Y",2
"lib2","SARS-CoV-2","GCCAACCACATCAAGG",19,144.62,6.18,-4.65,0.71,1.5,1.17,0.02,">1 nonsynonymous","Y66F Y91V N120G G152C",4
"lib2","SARS-CoV-2","GCCAACCCCTCCAAAT",3,49.15,10.68,-0.15,0.03,2.94,1.08,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","GCCAACCCGCATACGC",6,46.72,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","W23R Y119T K132Q",3
"lib2","SARS-CoV-2","GCCAACGATTGAAGAT",2,11.77,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F62L V103Y F126L N151P G166H P197G",6
"lib2","SARS-CoV-2","GCCAACGCTGGGATTA",5,36.35,10.86,0.03,0.06,2.93,1.07,0,"1 nonsynonymous","P191H",1
"lib2","SARS-CoV-2","GCCAACTAAACAAAAA",3,31.83,8.3,-2.53,0.19,1.81,1.06,0.01,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","GCCAACTAGGGTCCGG",15,78.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12N D90S T100H N120V",4
"lib2","SARS-CoV-2","GCCAACTCAATAGACT",4,15.75,8.73,-2.11,0.34,1.5,1,0.04,">1 nonsynonymous","C6E S41E S139F",3
"lib2","SARS-CoV-2","GCCAACTCATAACAGA",3,35.41,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","G101D F156P",2
"lib2","SARS-CoV-2","GCCAACTCGATCAAGA",1,24.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8E R73N V103D I142S G172R",5
"lib2","SARS-CoV-2","GCCAACTTTATGGCGG",11,44.33,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G101D Y121I",2
"lib2","SARS-CoV-2","GCCAACTTTGGATATA",7,98.16,10.32,-0.51,0.03,2.83,1.08,0,">1 nonsynonymous","K94A K128G",2
"lib2","SARS-CoV-2","GCCAAGAAAATCCATA",2,0.78,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","GCCAAGAACCCACGCG",1,26.32,6.3,-4.54,0.6,1.5,1.14,0.01,">1 nonsynonymous","G51A D90S F134C",3
"lib2","SARS-CoV-2","GCCAAGAATCTAAACA",17,58.91,9.24,-1.6,0.11,1.71,1.1,0.01,"1 nonsynonymous","P96Y",1
"lib2","SARS-CoV-2","GCCAAGACAAACGAAT",4,36.86,9.42,-1.42,0.07,2.67,1.02,0,">1 nonsynonymous","D97F Y143L",2
"lib2","SARS-CoV-2","GCCAAGACGAATCTAA",2,92.48,10.72,-0.12,0.04,2.89,1.13,0,">1 nonsynonymous","G9E P169T",2
"lib2","SARS-CoV-2","GCCAAGAGAACTATTC",12,13.57,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5G C102R G166P P177M",4
"lib2","SARS-CoV-2","GCCAAGAGCACAGGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1E Y21* S45E",3
"lib2","SARS-CoV-2","GCCAAGAGGCAACGAT",5,78.23,10.02,-0.82,0.06,2.6,1.08,0,">1 nonsynonymous","F44E Q144P",2
"lib2","SARS-CoV-2","GCCAAGAGGTCACAGG",4,52.48,7.73,-3.11,0.12,1.82,1.05,0.01,">1 nonsynonymous","S45P T100S P149E T170R",4
"lib2","SARS-CoV-2","GCCAAGATAAACTAGA",6,0.88,NA,NA,NA,NA,NA,NA,"stop","Y93T D98* V103S",3
"lib2","SARS-CoV-2","GCCAAGCAAATACTGT",13,92.39,7.87,-2.97,0.14,1.65,1.08,0.01,">1 nonsynonymous","F17L Q163D",2
"lib2","SARS-CoV-2","GCCAAGCACACTGAAC",8,87.65,6,-4.84,1.24,3,1.16,0,">1 nonsynonymous","R25I I138R",2
"lib2","SARS-CoV-2","GCCAAGCGCCTAGACA",2,54.48,10.77,-0.06,0.03,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAAGCTCCGCCAAA",3,41.38,9.15,-1.68,0.12,2.79,1.1,0.01,"1 nonsynonymous","N118P",1
"lib2","SARS-CoV-2","GCCAAGGACCTAGGGG",5,36.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44N C102G S108P",3
"lib2","SARS-CoV-2","GCCAAGGAGAAATTAG",4,0.41,NA,NA,NA,NA,NA,NA,"stop","L60* P161L T170A",3
"lib2","SARS-CoV-2","GCCAAGGCTTATCTCA",3,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S L125P G152C G174E",4
"lib2","SARS-CoV-2","GCCAAGGTAAATCAAT",5,325.2,7.44,-3.39,0.11,1.57,1.1,0,"1 nonsynonymous","Y175T",1
"lib2","SARS-CoV-2","GCCAAGTATATCCAAA",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18E T148W",2
"lib2","SARS-CoV-2","GCCAAGTCCAATCAGA",7,69.12,10.25,-0.59,0.03,2.95,1.01,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","GCCAAGTCCGTATTCG",7,74.31,8.3,-2.53,0.1,1.58,1.1,0,">1 nonsynonymous","G86N Y91L",2
"lib2","SARS-CoV-2","GCCAAGTCGCTCTATA",2,20.72,8.65,-2.19,0.15,2.38,1.09,0.01,">1 nonsynonymous","F44L C61M Y143L",3
"lib2","SARS-CoV-2","GCCAAGTGTGTTGCAG",3,24.12,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","D97Y D137T R179W",3
"lib2","SARS-CoV-2","GCCAAGTTCAACGAGG",1,5.29,8.87,-1.97,0.57,1.63,1.06,0.05,">1 nonsynonymous","S36E D75Q G152C G166L A190R",5
"lib2","SARS-CoV-2","GCCAAGTTGTTTAACA",10,71.84,6.56,-4.27,0.48,1.5,1.15,0.03,">1 nonsynonymous","A18S P96L I138C",3
"lib2","SARS-CoV-2","GCCAATAAGCATATAC",4,29.86,8.87,-1.97,0.22,1.5,1.08,0.02,">1 nonsynonymous","V11D D98T L111D S200I",4
"lib2","SARS-CoV-2","GCCAATAATGGAATTT",9,138.25,10.79,-0.05,0.05,2.94,1.07,0,"1 nonsynonymous","K56G",1
"lib2","SARS-CoV-2","GCCAATAATTCTTATT",9,158.9,10.19,-0.64,0.04,2.74,1.03,0,">1 nonsynonymous","P7Y E141F",2
"lib2","SARS-CoV-2","GCCAATACCATCCTTT",3,0.15,NA,NA,NA,NA,NA,NA,"stop","I2Y V103C N157S T170*",4
"lib2","SARS-CoV-2","GCCAATACGATTGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A42L S200*",2
"lib2","SARS-CoV-2","GCCAATAGTGAAGCTG",10,123.72,6,-4.84,1.27,1.5,1.1,0,"1 nonsynonymous","P177N",1
"lib2","SARS-CoV-2","GCCAATAGTTACCCCC",1,0.59,NA,NA,NA,NA,NA,NA,"stop","Y93* V115I T201S",3
"lib2","SARS-CoV-2","GCCAATATGAACTTGG",1,16.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F99S R127I",2
"lib2","SARS-CoV-2","GCCAATATGTGCCCCC",3,2.04,NA,NA,NA,NA,NA,NA,"stop","F8* A42S L122S",3
"lib2","SARS-CoV-2","GCCAATATTGCTTTCA",5,14.51,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V37L P96C S129I S164W F185S",5
"lib2","SARS-CoV-2","GCCAATCACCATAGGT",2,32.81,10.83,-0.01,0.06,2.83,1.2,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","GCCAATCATACTATGA",5,36.81,9.99,-0.85,0.12,2.53,1.01,0.01,">1 nonsynonymous","I88V G116M",2
"lib2","SARS-CoV-2","GCCAATCCCTTTGATA",13,63.28,6.95,-3.89,0.39,1.5,1.22,0.03,">1 nonsynonymous","S45T K94D",2
"lib2","SARS-CoV-2","GCCAATCCTAATATCG",7,53.48,9.39,-1.45,0.09,2.41,1.06,0,">1 nonsynonymous","N40S F47S K87L",3
"lib2","SARS-CoV-2","GCCAATCGCAACATAT",1,4.78,NA,NA,NA,NA,NA,NA,"stop","D59T F99* Y143D",3
"lib2","SARS-CoV-2","GCCAATCTACTGTACG",15,225.01,10.76,-0.08,0.04,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAATCTTGCTATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* S139T Y165G",3
"lib2","SARS-CoV-2","GCCAATGAACAACATG",5,87.28,9.92,-0.92,0.06,2.15,1.02,0,"1 nonsynonymous","Y50T",1
"lib2","SARS-CoV-2","GCCAATGAACAATAAA",2,9.58,10.75,-0.09,0.1,3,1,0,">1 nonsynonymous","A42P T140E G152S",3
"lib2","SARS-CoV-2","GCCAATGAGAAATAAA",2,12.28,6.85,-3.99,0.26,1.5,1,0.01,">1 nonsynonymous","N4F D90M A145P",3
"lib2","SARS-CoV-2","GCCAATGCAAGTGCAT",5,0.96,NA,NA,NA,NA,NA,NA,"stop","R27T T85M I138*",3
"lib2","SARS-CoV-2","GCCAATGCACCAATTG",2,14.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89L G101P N107T N120L",4
"lib2","SARS-CoV-2","GCCAATGCCCAGACAC",12,196.03,10.29,-0.54,0.03,2.92,1.04,0,">1 nonsynonymous","D59S D97T N120G G174Q",4
"lib2","SARS-CoV-2","GCCAATGTCAGAACTA",16,101.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99L C150R T201M",3
"lib2","SARS-CoV-2","GCCAATTCGCCCTAAA",4,79.04,10.26,-0.58,0.08,2.7,1.06,0,"1 nonsynonymous","R127S",1
"lib2","SARS-CoV-2","GCCAATTTGAGTAAAT",19,126.34,6,-4.84,0.99,1.5,1.14,0,">1 nonsynonymous","V77W G83V T140I",3
"lib2","SARS-CoV-2","GCCAATTTGGGCCCAT",9,116.28,9.24,-1.59,0.11,1.79,1.08,0.01,">1 nonsynonymous","K87T G101L L122R",3
"lib2","SARS-CoV-2","GCCACAAAAATTATCC",4,0.13,NA,NA,NA,NA,NA,NA,"stop","C6L V71Y A81S D112* L162A",5
"lib2","SARS-CoV-2","GCCACAATATACAAAT",3,29.24,9.74,-1.1,0.09,1.82,1.06,0.01,">1 nonsynonymous","N64I E76G",2
"lib2","SARS-CoV-2","GCCACAATTAAGCAAA",2,11.38,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","D59A K87A P161L",3
"lib2","SARS-CoV-2","GCCACACAAGATCTAG",1,15.17,7.63,-3.21,0.36,1.5,1,0.04,">1 nonsynonymous","N24V C102I P149H S164M",4
"lib2","SARS-CoV-2","GCCACACAGAAAGACG",2,58.61,6.12,-4.71,0.71,1.5,1.2,0.02,">1 nonsynonymous","I28V L38F A105V G117W",4
"lib2","SARS-CoV-2","GCCACACCCATTGTAA",8,97.8,10.8,-0.04,0.05,2.96,1.07,0,"1 nonsynonymous","L188F",1
"lib2","SARS-CoV-2","GCCACACCGAACGAAC",3,80.25,10.61,-0.23,0.04,2.91,1.11,0,">1 nonsynonymous","V115S T201V",2
"lib2","SARS-CoV-2","GCCACACGAGGCACTA",15,184.49,10.75,-0.08,0.03,2.95,1.07,0,">1 nonsynonymous","N4H V77L",2
"lib2","SARS-CoV-2","GCCACACGCACTGCAC",6,64.08,10.2,-0.63,0.06,2.76,1.06,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","GCCACACGGTCCAACG",1,19.67,10.09,-0.75,0.21,1.97,1.1,0.02,">1 nonsynonymous","P54T W106S",2
"lib2","SARS-CoV-2","GCCACAGAACGAGCTA",3,75.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G83W Y119C Y165W",3
"lib2","SARS-CoV-2","GCCACAGCAATATACT",2,15.9,9.3,-1.54,0.21,1.55,1.11,0.02,">1 nonsynonymous","A14C N58T A81S",3
"lib2","SARS-CoV-2","GCCACAGCAGATACAA",14,391.37,10.5,-0.34,0.03,2.88,1.07,0,">1 nonsynonymous","L5K L60T D97A",3
"lib2","SARS-CoV-2","GCCACAGCCACACCCC",8,56.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44C P96L N110L G117S K132D",5
"lib2","SARS-CoV-2","GCCACAGTAATACTTG",11,74.87,9.34,-1.5,0.08,1.69,1.09,0,">1 nonsynonymous","P82K K128N",2
"lib2","SARS-CoV-2","GCCACAGTGGGCTCGA",10,2180.46,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S45Y T55C G83Y D98L S113A V180I",6
"lib2","SARS-CoV-2","GCCACAGTTATTAGTA",2,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A14D L60P I88L S113G D137G E186V",7
"lib2","SARS-CoV-2","GCCACATAACTACCAA",2,84.93,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W23M N120W K128V P149A P177L",5
"lib2","SARS-CoV-2","GCCACATATAAGCGCT",8,58.2,9.05,-1.78,0.08,1.98,1.09,0,">1 nonsynonymous","Y91K E141M E154D",3
"lib2","SARS-CoV-2","GCCACATTCTACGTTT",5,443.59,10.82,-0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCACCAACCCACCTG",16,4.37,NA,NA,NA,NA,NA,NA,"stop","S45D A105G K128Y P149*",4
"lib2","SARS-CoV-2","GCCACCAAGATAGGAA",10,18.81,6,-4.84,2,1.5,1.24,0.05,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","GCCACCAAGTTTGATC",4,6.53,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V20S P96F E141K G174E",4
"lib2","SARS-CoV-2","GCCACCAATCCCTTAA",14,127.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F62P G86V",2
"lib2","SARS-CoV-2","GCCACCACGTAAACCC",11,73.14,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L95T W106K Y143N",3
"lib2","SARS-CoV-2","GCCACCCGCTTACGTT",3,46.25,6.12,-4.71,0.39,1.76,1.15,0,">1 nonsynonymous","R25D Y123S K128N",3
"lib2","SARS-CoV-2","GCCACCCGGCTCCAAA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","I2F C49E D68* I138R",4
"lib2","SARS-CoV-2","GCCACCCTTAAGACAG",4,24.18,6,-4.84,2,2.91,1.23,0.02,">1 nonsynonymous","L5Q D98L N107L I142Y",4
"lib2","SARS-CoV-2","GCCACCGAATATATCA",12,226.85,8.26,-2.57,0.12,1.95,1.07,0.01,">1 nonsynonymous","G9W F17A Y119R",3
"lib2","SARS-CoV-2","GCCACCGAATATATCC",2,1,NA,NA,NA,NA,NA,NA,"stop","Y66D F160P S184D P197*",4
"lib2","SARS-CoV-2","GCCACCGGTACCGTGA",5,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70P G86N C102H P169T",4
"lib2","SARS-CoV-2","GCCACCGTCCCCAGTG",7,8.16,9.42,-1.42,0.17,2.61,1.02,0.01,">1 nonsynonymous","A14R D34T S200N",3
"lib2","SARS-CoV-2","GCCACCTCTCACAAAA",5,1.62,NA,NA,NA,NA,NA,NA,"stop","C158Q Q176*",2
"lib2","SARS-CoV-2","GCCACCTGAAATGTTA",5,54.07,10.81,-0.03,0.08,2.79,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCACCTGCAGCATCA",3,8.46,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C6G G74I S184Y",3
"lib2","SARS-CoV-2","GCCACCTGCCCCGCCT",1,11.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56P C61M G86K Y91I L122K",5
"lib2","SARS-CoV-2","GCCACGAAACGGCTAT",1,9.54,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","I28F L57T L131R Q168F",4
"lib2","SARS-CoV-2","GCCACGACCTTCATAC",4,0.74,NA,NA,NA,NA,NA,NA,"stop","K26* P149C V173Y",3
"lib2","SARS-CoV-2","GCCACGACGGTGCATC",3,36.7,10.42,-0.41,0.06,2.85,1.11,0,">1 nonsynonymous","A22G P54T N110K",3
"lib2","SARS-CoV-2","GCCACGACTACCAAAA",1,11.2,8.19,-2.65,0.21,1.5,1,0.02,">1 nonsynonymous","G51K N58K F99L T148D V173R",5
"lib2","SARS-CoV-2","GCCACGACTGGAAAGT",4,28.86,9.75,-1.09,0.16,2,1.01,0.01,">1 nonsynonymous","T15K F47W E135L",3
"lib2","SARS-CoV-2","GCCACGATAAGCCTTT",2,12.16,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","D34S I72L S113K S147F",4
"lib2","SARS-CoV-2","GCCACGATATATTGTT",8,0.49,NA,NA,NA,NA,NA,NA,"stop","N13G S113*",2
"lib2","SARS-CoV-2","GCCACGATCAGTCTCG",7,177.22,10.79,-0.05,0.04,2.93,1.08,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GCCACGATTAGTCAAA",2,47.32,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","A18L V153Y P177E",3
"lib2","SARS-CoV-2","GCCACGCACTGTCCTA",1,109.12,9.76,-1.07,0.06,2.25,1.06,0,">1 nonsynonymous","S36A A81V F126L T201K",4
"lib2","SARS-CoV-2","GCCACGCGGATTCTTC",9,108.98,9,-1.83,0.07,2.6,1.12,0,">1 nonsynonymous","T55M N109F L131V",3
"lib2","SARS-CoV-2","GCCACGCGTTATCAAA",4,110.85,10.84,0,0.04,2.9,1.11,0,">1 nonsynonymous","P133S N171M",2
"lib2","SARS-CoV-2","GCCACGCTCCCGCAAG",3,0.15,NA,NA,NA,NA,NA,NA,"stop","V153* S164L",2
"lib2","SARS-CoV-2","GCCACGGCCATGCGAA",2,11.64,10.82,-0.02,0.02,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCACGGCTTCTTTAG",9,49.21,8.48,-2.36,0.21,1.5,1.07,0.02,">1 nonsynonymous","A18M S41A Y91A",3
"lib2","SARS-CoV-2","GCCACGGTAACCATTC",3,51.68,10.22,-0.62,0.06,2.87,1,0,">1 nonsynonymous","V37Y N58T S129F",3
"lib2","SARS-CoV-2","GCCACGGTCATTTAAG",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K G86C",2
"lib2","SARS-CoV-2","GCCACGGTGGTTCTAA",5,68.86,10.88,0.05,0.05,2.92,1.09,0,"1 nonsynonymous","S43Q",1
"lib2","SARS-CoV-2","GCCACGTAAGTTTTAG",4,134.91,10.5,-0.34,0.04,2.96,1.02,0,">1 nonsynonymous","I2S G9N Y66K",3
"lib2","SARS-CoV-2","GCCACGTAATCAATGG",8,23.35,9.38,-1.45,0.27,1.5,1.09,0.03,">1 nonsynonymous","I2K F8R N110L",3
"lib2","SARS-CoV-2","GCCACGTATTGACTAG",5,45.18,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V77M K94Y P133A P149Y Y165A Y178P",6
"lib2","SARS-CoV-2","GCCACGTTCACCAACA",6,36.31,10.55,-0.29,0.04,2.93,1.09,0,"1 nonsynonymous","Y35T",1
"lib2","SARS-CoV-2","GCCACTAAAATCTGCA",4,44.8,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","V32E T55G G172K",3
"lib2","SARS-CoV-2","GCCACTAACGATAAAA",6,119.96,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V52I A89K G101R N157L",4
"lib2","SARS-CoV-2","GCCACTACTATAAAAC",3,57.25,8.52,-2.31,0.08,2.62,1.1,0,">1 nonsynonymous","L122G G172S",2
"lib2","SARS-CoV-2","GCCACTAGAAGAATGA",1,12.01,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","G74L Q176Y",2
"lib2","SARS-CoV-2","GCCACTAGATATTGAA",3,24.01,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D59L D112K S129P",3
"lib2","SARS-CoV-2","GCCACTATATCAATAA",5,75.2,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N24Y T100R C158G",3
"lib2","SARS-CoV-2","GCCACTATATTATAAA",5,0.52,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","GCCACTATCACATGAC",3,5.96,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","E10I A42F G83S I104S E141S",5
"lib2","SARS-CoV-2","GCCACTATCCCTCTTC",5,96.19,9.27,-1.57,0.08,1.94,1.04,0,">1 nonsynonymous","F8V F47L C61F K198V",4
"lib2","SARS-CoV-2","GCCACTATTGAACCCT",1,29.42,10.14,-0.69,0.14,2.76,1.05,0.01,">1 nonsynonymous","P7Y S164Y",2
"lib2","SARS-CoV-2","GCCACTCGACCCTAAT",9,238.92,10.29,-0.54,0.03,2.83,1.05,0,"1 nonsynonymous","Y50H",1
"lib2","SARS-CoV-2","GCCACTCGTATGAAAG",3,103.3,10.73,-0.1,0.04,2.94,1.08,0,">1 nonsynonymous","N4R G152A",2
"lib2","SARS-CoV-2","GCCACTGATATACACT",10,69.46,8.68,-2.16,0.1,1.94,1.04,0,">1 nonsynonymous","Y35K F134S G174L",3
"lib2","SARS-CoV-2","GCCACTGTAACAGATG",4,60.28,9.3,-1.54,0.11,2.35,1.11,0.01,">1 nonsynonymous","N4S A14F K87Y F160I P197L",5
"lib2","SARS-CoV-2","GCCACTGTTCCATCTT",5,47.46,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I88S N157S",2
"lib2","SARS-CoV-2","GCCACTTATAACAAAC",6,76.35,10.4,-0.43,0.06,2.95,1.06,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","GCCACTTGATACAATA",1,29.52,9.99,-0.84,0.11,2.35,1.02,0.01,">1 nonsynonymous","L5M D34R E154G",3
"lib2","SARS-CoV-2","GCCAGAAAAGAGTGTA",4,37.53,6.03,-4.81,0.64,1.63,1.12,0.01,">1 nonsynonymous","Y93G Y119R F160K",3
"lib2","SARS-CoV-2","GCCAGAAACATATTGC",1,45.04,10.9,0.06,0.05,2.96,1.07,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","GCCAGAAAGAAAAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* A42S A81G D112Y",4
"lib2","SARS-CoV-2","GCCAGAAATTAATATC",6,104.97,10.85,0.02,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAGAACCCTGACAT",2,6.1,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","Q84P G101T",2
"lib2","SARS-CoV-2","GCCAGAAGCTCCAGGG",5,113.61,9.71,-1.12,0.05,2.09,1.04,0,"1 nonsynonymous","F8E",1
"lib2","SARS-CoV-2","GCCAGAATACGTGCCT",5,12.37,9.59,-1.24,0.08,2.9,1.12,0,">1 nonsynonymous","Y119N P149L",2
"lib2","SARS-CoV-2","GCCAGAATATAACCAT",4,58.79,10.8,-0.04,0.03,2.95,1.05,0,">1 nonsynonymous","I28Y T201R",2
"lib2","SARS-CoV-2","GCCAGAATGCCAGTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","S19M I88* N110K T140A V181S S200*",6
"lib2","SARS-CoV-2","GCCAGACAGCAAACAA",1,7.75,6,-4.84,2,3,1.14,0.04,">1 nonsynonymous","I72H Y93E",2
"lib2","SARS-CoV-2","GCCAGACAGGCGACTG",1,7.06,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","S45R S69W Q84N C150W",4
"lib2","SARS-CoV-2","GCCAGACGACGCTCCA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","V37P I80M D98* L122V N130F",5
"lib2","SARS-CoV-2","GCCAGACGACTTTTCA",7,157.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N118K L125N Y143M N151H P169A",5
"lib2","SARS-CoV-2","GCCAGACGCATCCTAC",2,94.08,6.11,-4.73,0.35,1.5,1.12,0,">1 nonsynonymous","S36C F62L E141V F156P Y175S L188T",6
"lib2","SARS-CoV-2","GCCAGACGTGTTCCCC",1,22.57,10.67,-0.17,0.06,2.87,1.14,0,"1 nonsynonymous","T201F",1
"lib2","SARS-CoV-2","GCCAGACTAATTCCAG",9,68.38,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50T Y119L",2
"lib2","SARS-CoV-2","GCCAGACTCAGATAAA",4,73.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36V A89H V103T L131V",4
"lib2","SARS-CoV-2","GCCAGACTTCTGAGCC",5,114.88,10.25,-0.59,0.03,2.98,1,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","GCCAGAGAAACCAAGT",2,2.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91G",1
"lib2","SARS-CoV-2","GCCAGAGTACCTGAGT",7,131.68,9.08,-1.76,0.05,2.94,1.07,0,">1 nonsynonymous","C61Q Q168L",2
"lib2","SARS-CoV-2","GCCAGATAAAATTTCA",5,9.03,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N1T C61G C102V S108D G146W R179A",6
"lib2","SARS-CoV-2","GCCAGATAATCAAAGC",2,48.53,11.01,0.18,0.05,3,1.01,0,">1 nonsynonymous","N1E V173L",2
"lib2","SARS-CoV-2","GCCAGATACAAGTACG",1,13.12,10.7,-0.14,0.1,2.84,1.15,0.01,">1 nonsynonymous","S41T T46I C61R",3
"lib2","SARS-CoV-2","GCCAGATCACATACAA",1,43.72,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y119F R127G N157S",3
"lib2","SARS-CoV-2","GCCAGATGTATCCGTG",7,36.94,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D97L D112N C158F",3
"lib2","SARS-CoV-2","GCCAGATTCATGCTCA",8,185.27,10.22,-0.62,0.04,2.8,1.03,0,">1 nonsynonymous","I2W S45D F99Y",3
"lib2","SARS-CoV-2","GCCAGCAACCCAGTGA",3,165.63,10.76,-0.07,0.04,2.94,1.08,0,"1 nonsynonymous","G152Q",1
"lib2","SARS-CoV-2","GCCAGCAGACATGATG",1,0.04,NA,NA,NA,NA,NA,NA,"stop","L122C Q144*",2
"lib2","SARS-CoV-2","GCCAGCAGTTTATATG",11,69.04,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I2A S41N C61G P96K W106T Y123M",6
"lib2","SARS-CoV-2","GCCAGCCAGAACCCAC",4,9.38,10.98,0.14,0.09,2.95,1.05,0,">1 nonsynonymous","F62W E141S",2
"lib2","SARS-CoV-2","GCCAGCCCAATACATA",5,24.72,10.12,-0.72,0.11,2.59,1,0,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","GCCAGCCCGATGGACT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Q Y91K S129N S139T T201L",5
"lib2","SARS-CoV-2","GCCAGCCTGAGCAGAG",3,5.45,7.87,-2.96,0.17,2.05,1,0.01,">1 nonsynonymous","G86T L187R",2
"lib2","SARS-CoV-2","GCCAGCCTTGAAAGCC",6,108.77,10.52,-0.31,0.05,2.89,1.11,0,"1 nonsynonymous","A145T",1
"lib2","SARS-CoV-2","GCCAGCGAGTCAATGG",2,111.39,10.09,-0.74,0.06,2.81,1.05,0,"1 nonsynonymous","Y121K",1
"lib2","SARS-CoV-2","GCCAGCTCGCAAATTG",11,109.61,10.9,0.06,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAGCTTCAATTACA",5,54.73,9.1,-1.73,0.08,2.75,1.1,0,">1 nonsynonymous","S41R N118H N151Q",3
"lib2","SARS-CoV-2","GCCAGGACACACATCC",5,94.76,9.07,-1.77,0.08,2.29,1.05,0,">1 nonsynonymous","W23C F156L P197T",3
"lib2","SARS-CoV-2","GCCAGGAGAAGCACAT",6,11.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3Q S69K P96F K132T A145E P177N",6
"lib2","SARS-CoV-2","GCCAGGAGTCAAAAAA",2,44.07,10.86,0.02,0.08,2.95,1.07,0,">1 nonsynonymous","N4S S29K",2
"lib2","SARS-CoV-2","GCCAGGGCGACCTAGC",4,18.51,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","I104D Y121L",2
"lib2","SARS-CoV-2","GCCAGGTGGGTCCGAA",2,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K A33R C49M D97A W106E P149I G152A",7
"lib2","SARS-CoV-2","GCCAGGTTGACGGTTT",2,9.23,NA,NA,NA,NA,NA,0.24,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","GCCAGTAACAACAATC",8,39.95,8.3,-2.53,0.26,1.53,1.07,0.03,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","GCCAGTATTGCTAATA",2,12.3,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","T15W S45Y L57C Q84E",4
"lib2","SARS-CoV-2","GCCAGTCAAATACAGT",5,47.35,7.85,-2.99,0.17,1.5,1.1,0.01,">1 nonsynonymous","C6M Y35H N130F F160S K198S",5
"lib2","SARS-CoV-2","GCCAGTCAGCCCACCA",1,74.15,10.8,-0.04,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCAGTCCCGGGCGAA",7,114.13,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10W R16D C150S",3
"lib2","SARS-CoV-2","GCCAGTGCCTATATAC",2,32,9.8,-1.04,0.06,1.97,1.04,0,"1 nonsynonymous","P96M",1
"lib2","SARS-CoV-2","GCCAGTTATATACGTT",10,119.29,10.26,-0.57,0.03,2.84,1.02,0,">1 nonsynonymous","Y35K N130T",2
"lib2","SARS-CoV-2","GCCAGTTGAAAACACT",2,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22R F70T A105S N110M",4
"lib2","SARS-CoV-2","GCCAGTTTAACTGAAC",11,84.65,6,-4.84,2,1.5,1.25,0.04,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","GCCAGTTTGCGTTTCT",6,47.43,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L60Y G86S P96G W106T",4
"lib2","SARS-CoV-2","GCCAGTTTTTAAAGAC",3,65.36,8.88,-1.96,0.12,2.59,1.05,0.01,">1 nonsynonymous","G117W K128A",2
"lib2","SARS-CoV-2","GCCATAAAAACTCTTA",1,21.11,10.83,-0.01,0.04,2.98,1.03,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","GCCATAAAAGATTCAG",5,83.45,10.82,-0.02,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCATAAAGCTGGTTG",12,2.24,NA,NA,NA,NA,NA,NA,"stop","A42Y L57M L95*",3
"lib2","SARS-CoV-2","GCCATAAAGGACATGC",7,105.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C31H N58P Y91L R136V",4
"lib2","SARS-CoV-2","GCCATAAAGTCTCGGG",1,23.64,9.94,-0.89,0.08,2.21,1.01,0,">1 nonsynonymous","A33D S129P",2
"lib2","SARS-CoV-2","GCCATAAATAAATTAT",5,105.84,9.97,-0.87,0.07,2.41,1.02,0,">1 nonsynonymous","F99L T148M",2
"lib2","SARS-CoV-2","GCCATAAATTAAGTCA",1,63.1,10.92,0.08,0.08,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCATAAGAAACTGGA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V T85E N130L E141V L183E",5
"lib2","SARS-CoV-2","GCCATAAGAAGTTTAT",7,78.78,8.39,-2.44,0.08,2.63,1.1,0,">1 nonsynonymous","D90F F126Q",2
"lib2","SARS-CoV-2","GCCATAAGATACAGTA",9,125.79,10.49,-0.34,0.06,2.93,1.05,0,">1 nonsynonymous","V52I G116M",2
"lib2","SARS-CoV-2","GCCATAAGCCAGATGC",4,23.11,6.7,-4.14,0.34,1.5,1.22,0.02,">1 nonsynonymous","F99C T148D",2
"lib2","SARS-CoV-2","GCCATAAGGTAAAGAA",3,29.16,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10N L38I D98N W106C G116K",5
"lib2","SARS-CoV-2","GCCATAAGTATTGGCT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q K87F L162W",3
"lib2","SARS-CoV-2","GCCATAATATATGAAT",10,162.81,10.69,-0.14,0.03,2.94,1.06,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","GCCATAATATTGTATT",9,77.53,10.8,-0.04,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCATAATCATGTCAG",12,189.12,10.76,-0.08,0.04,2.93,1.08,0,">1 nonsynonymous","P7K V153N",2
"lib2","SARS-CoV-2","GCCATAATGCTACTGT",1,31.17,9.95,-0.89,0.12,1.99,1.07,0.01,">1 nonsynonymous","L95T K114Q",2
"lib2","SARS-CoV-2","GCCATAATTCACCGAC",4,53.43,10.88,0.04,0.06,2.98,1.03,0,">1 nonsynonymous","L5T S29R D59N L122T P191S",5
"lib2","SARS-CoV-2","GCCATACAATGCCCTT",13,93.66,9.31,-1.52,0.04,2.92,1.06,0,">1 nonsynonymous","G9S G117L P197Q",3
"lib2","SARS-CoV-2","GCCATACATTACTAAC",13,9.72,NA,NA,NA,NA,NA,NA,"stop","G9D N64S G74* G86R L183G",5
"lib2","SARS-CoV-2","GCCATACCAATCGACT",13,4.25,NA,NA,NA,NA,NA,NA,"stop","Y66* C102F",2
"lib2","SARS-CoV-2","GCCATACCGAAGTTGG",10,139.08,6.75,-4.09,0.38,1.5,1.21,0.02,">1 nonsynonymous","R136G Y165F",2
"lib2","SARS-CoV-2","GCCATACCGAGACCCA",8,140.94,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V32Q I88H N109G G146E",4
"lib2","SARS-CoV-2","GCCATACCTAACAACG",3,94.28,10.82,-0.02,0.04,2.92,1.07,0,">1 nonsynonymous","T148A T201N",2
"lib2","SARS-CoV-2","GCCATAGAAAATAGCC",1,8.5,9.09,-1.75,0.17,1.8,1.05,0.01,">1 nonsynonymous","T15C D97F K114S L122V",4
"lib2","SARS-CoV-2","GCCATAGACACCGATA",1,167.47,10.79,-0.05,0.04,2.94,1.08,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","GCCATAGACGAGCTAA",5,78.91,10.25,-0.59,0.05,2.86,1.05,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","GCCATAGCTAGCGACA",2,76.94,10.15,-0.68,0.03,2.85,1.04,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GCCATAGGGTCCCTCC",2,44.97,9.16,-1.68,0.17,2.28,1.18,0.03,">1 nonsynonymous","N4P N118I",2
"lib2","SARS-CoV-2","GCCATAGTACCCGACG",5,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91A W106A S139M L162T",4
"lib2","SARS-CoV-2","GCCATATATGGCAAGA",2,21.58,9.23,-1.6,0.09,1.96,1.08,0,">1 nonsynonymous","N58K Y91A F160D",3
"lib2","SARS-CoV-2","GCCATATCGATTCCCA",2,0.53,NA,NA,NA,NA,NA,NA,"stop","Y39L C61V P82*",3
"lib2","SARS-CoV-2","GCCATATGAAACTGAG",1,26.88,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","C49Q W106C L122M T140V",4
"lib2","SARS-CoV-2","GCCATATGGCGTCTAA",5,66.56,10.58,-0.26,0.04,3,1.03,0,"1 nonsynonymous","Y178W",1
"lib2","SARS-CoV-2","GCCATATGGTATCATC",2,6,9.36,-1.48,0.56,1.5,1,0.07,">1 nonsynonymous","Y91R I104T N120K E141N V173L",5
"lib2","SARS-CoV-2","GCCATATTAGGCCCCT",2,0.78,NA,NA,NA,NA,NA,NA,"stop","G86T F160H T201*",3
"lib2","SARS-CoV-2","GCCATCAAAACACAGC",5,41.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44K E76Y C150F",3
"lib2","SARS-CoV-2","GCCATCAAACCGCATT",1,23.99,10.52,-0.32,0.06,2.9,1.12,0,">1 nonsynonymous","G83R D98H",2
"lib2","SARS-CoV-2","GCCATCAACTTTTTCA",6,0.23,NA,NA,NA,NA,NA,NA,"stop","G9R Y39* F44* K87* P161S",5
"lib2","SARS-CoV-2","GCCATCAAGATCCAAG",2,15.15,10.46,-0.38,0.21,2.24,1,0.02,">1 nonsynonymous","D97Q P133H",2
"lib2","SARS-CoV-2","GCCATCAATGGCATAC",5,56.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9V L95C Y119S E154C",4
"lib2","SARS-CoV-2","GCCATCCCATAATACA",9,58.76,10.56,-0.28,0.06,2.89,1.06,0,"1 nonsynonymous","S19A",1
"lib2","SARS-CoV-2","GCCATCCTTTTTTTTA",7,31.69,6,-4.84,1.71,1.5,1.1,0.01,">1 nonsynonymous","V11I R16L R25L F62T",4
"lib2","SARS-CoV-2","GCCATCTACCAGTCAG",3,39.95,9.65,-1.19,0.13,1.84,1.1,0,">1 nonsynonymous","R27K C49S E141D",3
"lib2","SARS-CoV-2","GCCATCTATCGACATG",7,26.05,6,-4.84,2,3,1.21,0,">1 nonsynonymous","T55M Y93G S139R P149M T201S",5
"lib2","SARS-CoV-2","GCCATCTCCTATGTCC",5,54.11,10.76,-0.08,0.05,2.84,1.15,0,">1 nonsynonymous","A18R S139G Q168W A190G",4
"lib2","SARS-CoV-2","GCCATGCAAATGTTGG",14,13.75,8.4,-2.44,0.2,1.5,1.12,0.02,">1 nonsynonymous","A33M Y50S G116M",3
"lib2","SARS-CoV-2","GCCATGCAACGTATGT",4,9.5,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","W23P S69V G86F V103S K114S",5
"lib2","SARS-CoV-2","GCCATGCCTCAACCTA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","L57H G101D G116P T140D Q144*",5
"lib2","SARS-CoV-2","GCCATGCCTTACGACG",1,21.47,10.9,0.06,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCATGCGAATGGGAA",4,60.18,8.26,-2.57,0.07,1.86,1.11,0,">1 nonsynonymous","I28W G51R N64K T140G G155Y",5
"lib2","SARS-CoV-2","GCCATGCGTTAGAATT",1,29.17,10.83,0,0.06,2.97,1.03,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","GCCATGGCGCAAGTCT",2,67.26,10.42,-0.41,0.12,2.74,1,0.01,">1 nonsynonymous","L60F G152C",2
"lib2","SARS-CoV-2","GCCATGGTGCCACAGC",1,48.75,10.25,-0.59,0.09,2.8,1.12,0.01,">1 nonsynonymous","F44S C61L P191T",3
"lib2","SARS-CoV-2","GCCATGTAACAAGGCA",3,17.41,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","R25K G101D",2
"lib2","SARS-CoV-2","GCCATGTCCTAAAGAA",5,16.33,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","N4A S43T F167K",3
"lib2","SARS-CoV-2","GCCATGTTCAAACTCT",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104G E141M",2
"lib2","SARS-CoV-2","GCCATTAAGGATAAAT",6,3.26,NA,NA,NA,NA,NA,NA,"stop","D68* Q84S P161D",3
"lib2","SARS-CoV-2","GCCATTACGTTTAGCA",5,61.27,6,-4.84,1.17,3,1.2,0.01,">1 nonsynonymous","L60S C102S",2
"lib2","SARS-CoV-2","GCCATTATATACACCT",5,95.54,10.66,-0.18,0.05,2.9,1.09,0,">1 nonsynonymous","S43P T63G",2
"lib2","SARS-CoV-2","GCCATTATTACGTGAC",6,62.24,10.1,-0.74,0.05,2.97,1.05,0,">1 nonsynonymous","N4Q L125S P197F",3
"lib2","SARS-CoV-2","GCCATTCAAAATGTCT",1,47.99,6.29,-4.55,0.75,1.5,1.28,0.03,">1 nonsynonymous","N30A C61S G86W Y119L Q168S G174L",6
"lib2","SARS-CoV-2","GCCATTCAGTTTATAA",1,19.73,10.67,-0.16,0.08,2.95,1.06,0,"1 nonsynonymous","N151G",1
"lib2","SARS-CoV-2","GCCATTCATATTCCCA",6,55.44,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","R73P N110D N157W",3
"lib2","SARS-CoV-2","GCCATTCCGGTTTAAT",6,6.77,NA,NA,NA,NA,NA,NA,"stop","T100L N107H Y119*",3
"lib2","SARS-CoV-2","GCCATTCCGTTATACA",4,1.4,NA,NA,NA,NA,NA,NA,"stop","G9* S36G K87I T100I",4
"lib2","SARS-CoV-2","GCCATTCTCGCTACTA",6,3.42,NA,NA,NA,NA,NA,NA,"stop","T15S I28K D68* D98K",4
"lib2","SARS-CoV-2","GCCATTGAACCGCCGA",6,3.58,NA,NA,NA,NA,NA,NA,"stop","S36R Y50* S129F Q144V F156V",5
"lib2","SARS-CoV-2","GCCATTGAAGTCTACG",3,32.51,10.23,-0.61,0.05,2.93,1.04,0,">1 nonsynonymous","Y66H V115A T140A",3
"lib2","SARS-CoV-2","GCCATTGAATTGCAAC",3,40.09,10.78,-0.06,0.05,3,1,0,"1 nonsynonymous","E10S",1
"lib2","SARS-CoV-2","GCCATTGGATAAAATC",4,103.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T63Y N107F P177H",3
"lib2","SARS-CoV-2","GCCATTTAAAATCAAC",6,214.83,9.45,-1.39,0.04,1.91,1.04,0,">1 nonsynonymous","L5N A81T L95V P149K",4
"lib2","SARS-CoV-2","GCCATTTAATTTAAAT",6,20.28,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y50S Q84L I138P G152Y",4
"lib2","SARS-CoV-2","GCCATTTACACCACGT",9,151.22,10.65,-0.19,0.03,2.91,1.06,0,">1 nonsynonymous","A42V E186N",2
"lib2","SARS-CoV-2","GCCATTTATAGATTTT",3,68.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37R I88N T170W",3
"lib2","SARS-CoV-2","GCCATTTCAATATGTA",9,49.41,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S41G P82I D97M Y143Q",4
"lib2","SARS-CoV-2","GCCATTTCACGCATAT",2,30.59,6,-4.84,0.63,3,1.19,0,">1 nonsynonymous","A33R T85A P96S N118S",4
"lib2","SARS-CoV-2","GCCATTTGTTTTAACG",14,241.83,10.84,0.01,0.05,2.93,1.06,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","GCCATTTTAGTTATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35D F99*",2
"lib2","SARS-CoV-2","GCCATTTTAGTTTTAA",2,73.47,9.98,-0.86,0.09,2.08,1.07,0,">1 nonsynonymous","V37L L95V W106R",3
"lib2","SARS-CoV-2","GCCATTTTCTATACAG",4,34.93,9.4,-1.44,0.08,2.5,1.01,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","GCCCAAAAAAATAACG",3,8.83,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","I2E V103D V173I S184R",4
"lib2","SARS-CoV-2","GCCCAAAAACGGTTCA",12,217.21,10.81,-0.03,0.05,2.92,1.1,0,"1 nonsynonymous","I2H",1
"lib2","SARS-CoV-2","GCCCAAAAATAGATGA",2,47.37,10.64,-0.19,0.07,2.85,1.15,0,">1 nonsynonymous","Y39V K114S P149S",3
"lib2","SARS-CoV-2","GCCCAAAAGAATCTGG",2,33.44,10.59,-0.25,0.03,2.97,1.05,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","GCCCAAAAGAGATGTA",4,13.32,6.7,-4.13,0.75,1.5,1.22,0.07,">1 nonsynonymous","F8Y K94I I138G",3
"lib2","SARS-CoV-2","GCCCAAAATATAGGTA",8,28.47,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S69W F99A F185L",3
"lib2","SARS-CoV-2","GCCCAAAATCATTTCC",7,460.73,10.37,-0.46,0.04,2.8,1.04,0,">1 nonsynonymous","D97E F160K Y178S",3
"lib2","SARS-CoV-2","GCCCAAACTCGAATTG",4,23.88,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G9V N107L R127F",3
"lib2","SARS-CoV-2","GCCCAAAGATACCGGC",2,6.63,6.03,-4.81,1.47,1.5,1.11,0.02,">1 nonsynonymous","Y66I I104N",2
"lib2","SARS-CoV-2","GCCCAAAGATTCTCCT",19,3.38,NA,NA,NA,NA,NA,NA,"stop","T63P D98* V115H R136E",4
"lib2","SARS-CoV-2","GCCCAAATAAATTATG",5,51.3,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","P96L S139I",2
"lib2","SARS-CoV-2","GCCCAACCGTCAATCA",1,8,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","T100H W106K N120W A145I",4
"lib2","SARS-CoV-2","GCCCAACGAGATTGAT",2,129.95,10.38,-0.46,0.04,2.89,1.1,0,">1 nonsynonymous","F8I V115F",2
"lib2","SARS-CoV-2","GCCCAACTCATCCAAA",11,6.23,NA,NA,NA,NA,NA,NA,"stop","R73* I88L P96L Q176L",4
"lib2","SARS-CoV-2","GCCCAAGAAAGAAAAT",6,113.55,10.16,-0.68,0.05,2.73,1.07,0,">1 nonsynonymous","Y35S D59R P149T",3
"lib2","SARS-CoV-2","GCCCAAGCAAAAACAC",4,46.44,10.79,-0.04,0.05,2.93,1.09,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","GCCCAAGCCCCAGTAA",4,223.17,10.43,-0.41,0.04,2.88,1.08,0,"1 nonsynonymous","F12M",1
"lib2","SARS-CoV-2","GCCCAAGGCTATTACG",3,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I G146Y V173L",3
"lib2","SARS-CoV-2","GCCCAAGTTGAATGTT",8,24.33,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T15L K48T F62S V103W",4
"lib2","SARS-CoV-2","GCCCAAGTTGAGGTGT",17,143.44,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63G V77E A145N C150L",4
"lib2","SARS-CoV-2","GCCCAATAAGCCCTAG",5,27.16,8.76,-2.08,0.07,3,1.08,0,">1 nonsynonymous","S29Q S41Y N118Y L125Q",4
"lib2","SARS-CoV-2","GCCCAATAATAGTAGT",3,17.32,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C6D G51W F99L I104P I142S",5
"lib2","SARS-CoV-2","GCCCAATACCCAGCTG",2,29.72,10.72,-0.12,0.06,2.85,1.1,0,"1 nonsynonymous","A42H",1
"lib2","SARS-CoV-2","GCCCAATCTAATAAAA",23,100.35,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12R A89V D98Y D112W",4
"lib2","SARS-CoV-2","GCCCAATTAAGCGGCG",8,1.09,NA,NA,NA,NA,NA,NA,"stop","A14* P161S",2
"lib2","SARS-CoV-2","GCCCAATTTCCTTGCG",5,14.07,9.78,-1.05,0.07,3,1.06,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","GCCCACAAGAGAAGCT",5,118.63,10.39,-0.45,0.02,2.93,1.02,0,">1 nonsynonymous","Y39I K56W Q163G T201K",4
"lib2","SARS-CoV-2","GCCCACACAAGTTTAA",7,64.67,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2S K56M T63D V115Y T148D G155C L162P",7
"lib2","SARS-CoV-2","GCCCACAGTGGACCAT",5,1.5,NA,NA,NA,NA,NA,NA,"stop","N30L L60V Y143* N157H",4
"lib2","SARS-CoV-2","GCCCACATAAGAAACG",2,46.07,8.12,-2.72,0.2,1.5,1.13,0.01,">1 nonsynonymous","V37N G86H F156T",3
"lib2","SARS-CoV-2","GCCCACCAAAAAAATA",5,34.6,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y91T T170I",2
"lib2","SARS-CoV-2","GCCCACCACTTGATAA",22,413.42,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V32K N92F G101L T201S",4
"lib2","SARS-CoV-2","GCCCACCATCACACGA",5,7.67,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","W23F G101D N118L S184G",4
"lib2","SARS-CoV-2","GCCCACCGTTAGCAAA",3,0.23,NA,NA,NA,NA,NA,NA,"stop","D90E N109Q D137G P149*",4
"lib2","SARS-CoV-2","GCCCACGAATGTCAGG",3,0.54,NA,NA,NA,NA,NA,NA,"stop","V20R G83*",2
"lib2","SARS-CoV-2","GCCCACGACAAACCCC",8,128,9.71,-1.12,0.09,2.08,1.07,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","GCCCACGAGGAACGAG",7,3.36,NA,NA,NA,NA,NA,NA,"stop","N13* I28L L57M Y91Q W106T",5
"lib2","SARS-CoV-2","GCCCACGTCACCCAAA",12,224.43,10.88,0.04,0.04,2.94,1.08,0,"1 nonsynonymous","T3K",1
"lib2","SARS-CoV-2","GCCCACGTGTACTCCT",2,32.66,6.61,-4.23,0.33,1.5,1.12,0.01,">1 nonsynonymous","N107R Y119H T170L",3
"lib2","SARS-CoV-2","GCCCACTAAAGAAGTA",5,49.37,7.23,-3.61,0.36,1.5,1.24,0.03,">1 nonsynonymous","S29M V37I P96M",3
"lib2","SARS-CoV-2","GCCCACTCCAGTAAGT",7,41.69,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F12M S41Q R124D C150R F167I",5
"lib2","SARS-CoV-2","GCCCACTGATAAATAC",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R T85Y V115M",3
"lib2","SARS-CoV-2","GCCCACTTACGCTGCA",6,76.44,10.82,-0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCCAGAAACACAAGC",3,6.47,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15M D97K G146V G152I P197R",5
"lib2","SARS-CoV-2","GCCCAGAAGAGCTATA",1,20.66,6.54,-4.3,0.26,1.5,1.07,0.01,">1 nonsynonymous","S113R N120M Q168S",3
"lib2","SARS-CoV-2","GCCCAGATAAGCGATT",12,6.52,NA,NA,NA,NA,NA,NA,"stop","T3G K26* C61P D75L",4
"lib2","SARS-CoV-2","GCCCAGCATCCCTGAC",5,0.09,NA,NA,NA,NA,NA,NA,"stop","K87I I138* K198W",3
"lib2","SARS-CoV-2","GCCCAGCATGAATATT",9,101.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S69G Y121N N157W",3
"lib2","SARS-CoV-2","GCCCAGCCCGCAGTAC",2,22.99,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F70G L95M P177R",3
"lib2","SARS-CoV-2","GCCCAGCTATCGTACT",4,9.9,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","F99G F126T T201W",3
"lib2","SARS-CoV-2","GCCCAGGACCAGAGAA",4,44.43,10.11,-0.73,0.1,2.38,1.04,0,">1 nonsynonymous","L5I W106R",2
"lib2","SARS-CoV-2","GCCCAGGATAAACGAA",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L N24S S45D T63S",4
"lib2","SARS-CoV-2","GCCCAGGGTGTATAAC",5,34.96,6.59,-4.24,0.37,1.75,1.08,0.02,">1 nonsynonymous","N64D D90K R179L",3
"lib2","SARS-CoV-2","GCCCAGGTTACTTTAA",10,65.02,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F99S N120T",2
"lib2","SARS-CoV-2","GCCCAGTATTAGAATA",2,0.33,NA,NA,NA,NA,NA,NA,"stop","L5* L95* S139V",3
"lib2","SARS-CoV-2","GCCCATAAAGAGAATT",1,51.39,6.13,-4.71,0.6,1.52,1.11,0.01,">1 nonsynonymous","R25L S53K R73V F99R S113M P177R",6
"lib2","SARS-CoV-2","GCCCATAACAGCACAC",4,51.36,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I104K V173S",2
"lib2","SARS-CoV-2","GCCCATAAGGATCCAC",15,82.63,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","V77R D112V",2
"lib2","SARS-CoV-2","GCCCATAGAAGTGCCA",3,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* A14G L162T",3
"lib2","SARS-CoV-2","GCCCATCAAAAAAAGA",4,20.21,9.14,-1.7,0.21,1.5,1.1,0.03,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","GCCCATCACGGCCGAT",15,112.07,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6P I104P S139P F167D",4
"lib2","SARS-CoV-2","GCCCATCCAATTGTTA",19,321.81,10.72,-0.11,0.03,2.92,1.08,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GCCCATCGAACAATAT",1,27.14,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N92Q S113R C158Y",3
"lib2","SARS-CoV-2","GCCCATCGGGCATCTG",2,34,9.32,-1.51,0.19,1.56,1.12,0.02,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","GCCCATGAGCCTCCAA",8,209.3,9.41,-1.43,0.06,2.8,1.12,0,"1 nonsynonymous","I142R",1
"lib2","SARS-CoV-2","GCCCATGCAAATCTCA",2,48.32,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","T63P D137V",2
"lib2","SARS-CoV-2","GCCCATGCAGTGAGGC",6,0.49,NA,NA,NA,NA,NA,NA,"stop","I80* D97N Y123K T201L",4
"lib2","SARS-CoV-2","GCCCATTAAAAATAAA",8,68.54,9.05,-1.79,0.1,2.33,1.11,0,">1 nonsynonymous","K56F I142S",2
"lib2","SARS-CoV-2","GCCCATTAGAACCACT",7,201.61,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S36M F126R Y178K",3
"lib2","SARS-CoV-2","GCCCATTATAAACGAA",3,12.29,6.4,-4.44,0.51,3,1.1,0.02,">1 nonsynonymous","A33D D98L R136V",3
"lib2","SARS-CoV-2","GCCCATTGAATAAAGG",8,132.18,10.14,-0.69,0.08,2.49,1.04,0,">1 nonsynonymous","P96C T201Q",2
"lib2","SARS-CoV-2","GCCCATTTACGAACAG",1,22,10.29,-0.54,0.08,2.77,1.23,0,">1 nonsynonymous","L125A F160H H189T",3
"lib2","SARS-CoV-2","GCCCATTTCGAAGGAT",1,5.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74N K94Y",2
"lib2","SARS-CoV-2","GCCCCAAATGTTTCAA",4,4.02,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCCCCAACGGTCCAAA",2,78.38,10.53,-0.3,0.04,2.9,1.07,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","GCCCCAAGGCCTATTG",2,75.97,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T55R N107C N120G P177R",4
"lib2","SARS-CoV-2","GCCCCAAGTGAGAAAT",6,57.89,10.83,0,0.06,2.89,1.09,0,"1 nonsynonymous","N4H",1
"lib2","SARS-CoV-2","GCCCCACAAAGTCCGC",6,46.72,10.67,-0.17,0.06,2.93,1.07,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","GCCCCACACCAACATA",9,141.88,10.18,-0.66,0.03,2.89,1.07,0,">1 nonsynonymous","C6L C61N",2
"lib2","SARS-CoV-2","GCCCCACCCATTCTGG",4,28.54,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S45Y Q84V N92L T201S",4
"lib2","SARS-CoV-2","GCCCCACCTGGACTTT",7,36.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37H C49G D90N A145V",4
"lib2","SARS-CoV-2","GCCCCAGAACAGCGAT",4,51.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K128L P149Q P161D",3
"lib2","SARS-CoV-2","GCCCCAGCTTGTTACT",13,375.96,10.32,-0.51,0.04,2.96,1.05,0,">1 nonsynonymous","E154I N171V",2
"lib2","SARS-CoV-2","GCCCCAGGACCAGACG",6,87.7,10.82,-0.02,0.02,2.98,1.03,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","GCCCCAGGCCCAGATG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5P E154*",2
"lib2","SARS-CoV-2","GCCCCAGTCATGAAAA",1,33.33,10.35,-0.49,0.04,2.99,1.01,0,">1 nonsynonymous","T63V I138T F156I",3
"lib2","SARS-CoV-2","GCCCCATGCACTTATG",5,19.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y35T S139P",2
"lib2","SARS-CoV-2","GCCCCATGCCCGACGT",3,12.79,9.1,-1.74,0.18,2.67,1.11,0.01,">1 nonsynonymous","F44L N118H",2
"lib2","SARS-CoV-2","GCCCCATGCTAAGAAA",11,180.44,10.15,-0.69,0.05,2.65,1.02,0,">1 nonsynonymous","V32Q F44H E141V A192S",4
"lib2","SARS-CoV-2","GCCCCCAACGGGTTAT",4,34.96,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","P7A T15F I28A K48W G116N T201V",6
"lib2","SARS-CoV-2","GCCCCCAAGAGGGGGT",1,24.49,10.72,-0.12,0.05,2.88,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCCCCAAGGGAATAC",4,43.2,9.95,-0.89,0.08,2.17,1.03,0,"1 nonsynonymous","V180A",1
"lib2","SARS-CoV-2","GCCCCCACGTAAACAG",8,189.78,10.85,0.01,0.05,2.94,1.08,0,"1 nonsynonymous","T85R",1
"lib2","SARS-CoV-2","GCCCCCACTAATAAAG",14,102.1,6,-4.84,2,3,1.2,0,">1 nonsynonymous","F62H V182M",2
"lib2","SARS-CoV-2","GCCCCCAGTAATATCA",1,7.29,9.82,-1.01,0.14,2.49,1,0.01,">1 nonsynonymous","N13V N58Q",2
"lib2","SARS-CoV-2","GCCCCCATGCAACTCT",7,87.19,9.17,-1.67,0.04,2.92,1.09,0,">1 nonsynonymous","Y35F A42I N157S",3
"lib2","SARS-CoV-2","GCCCCCCAACCAGGGT",11,124.21,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R25C D59G K94G R127V G155W",5
"lib2","SARS-CoV-2","GCCCCCCCTAGGTAAA",4,37.24,6.9,-3.93,0.45,1.5,1.22,0.05,">1 nonsynonymous","G83L S113T D137S",3
"lib2","SARS-CoV-2","GCCCCCCTTAAAATCC",4,50.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Q84W K87R E135K",3
"lib2","SARS-CoV-2","GCCCCCGACCTATAAC",5,165.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R124S P149T F167S R179C",4
"lib2","SARS-CoV-2","GCCCCCGCAAACATTT",2,41.01,10.11,-0.73,0.08,2.5,1.07,0,">1 nonsynonymous","N30Y T100S",2
"lib2","SARS-CoV-2","GCCCCCGCCACATTAC",9,121.81,10.36,-0.48,0.07,2.44,1.07,0,">1 nonsynonymous","Q163F V173S",2
"lib2","SARS-CoV-2","GCCCCCGCTTTCGTCA",7,0.07,NA,NA,NA,NA,NA,NA,"stop","F12R E141K F156*",3
"lib2","SARS-CoV-2","GCCCCCTAAGCAGGTC",2,36.48,10.85,0.01,0.09,2.88,1.07,0,">1 nonsynonymous","R16S Y35V",2
"lib2","SARS-CoV-2","GCCCCCTCTAGTTATA",4,6.56,6.28,-4.56,2,1.5,1.16,0.03,"1 nonsynonymous","L183E",1
"lib2","SARS-CoV-2","GCCCCCTTATTTTCTA",1,30.4,9.61,-1.22,0.09,2.07,1.04,0,">1 nonsynonymous","A33S L57T P149H",3
"lib2","SARS-CoV-2","GCCCCGACTACAGGTT",6,193.28,10.36,-0.47,0.04,2.85,1.09,0,"1 nonsynonymous","Y66A",1
"lib2","SARS-CoV-2","GCCCCGAGAGAAGATT",2,13.85,6,-4.84,2,1.5,1.07,0.04,">1 nonsynonymous","F99T T170Y",2
"lib2","SARS-CoV-2","GCCCCGCAAAATGCCG",8,98.57,9.57,-1.27,0.07,2.21,1.05,0,">1 nonsynonymous","Y91A G116P",2
"lib2","SARS-CoV-2","GCCCCGCGCGCATACC",6,72.08,10.19,-0.64,0.05,2.81,1.03,0,">1 nonsynonymous","N4L K26V S129D Q144M",4
"lib2","SARS-CoV-2","GCCCCGGCCTAGACCC",8,66.94,8.37,-2.47,0.33,1.5,1.01,0.04,">1 nonsynonymous","L5S D90W N107V T201M",4
"lib2","SARS-CoV-2","GCCCCGGTGTACGCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","S45K T100R K128*",3
"lib2","SARS-CoV-2","GCCCCGTAATTCAGTC",1,44.73,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27A S53F G86N N92S G117E P177C",6
"lib2","SARS-CoV-2","GCCCCTAAAAATACGA",3,24.36,6,-4.84,2,1.5,1.06,0.01,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","GCCCCTAAACGTTATA",8,1.82,NA,NA,NA,NA,NA,NA,"stop","F99G L131A E135* L183S",4
"lib2","SARS-CoV-2","GCCCCTAACTGTAGCC",11,117.14,10.42,-0.42,0.04,2.9,1.1,0,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","GCCCCTAAGAAGTCCA",1,55.68,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35N N120L V180G",3
"lib2","SARS-CoV-2","GCCCCTAATACTTGCC",4,92.54,10.89,0.05,0.05,2.9,1.1,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","GCCCCTACCAATACAT",3,12.17,9.82,-1.01,0.09,2.4,1.07,0,">1 nonsynonymous","C31R E141V T201L",3
"lib2","SARS-CoV-2","GCCCCTACCCTATAGC",2,21.75,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y39L E76C K87N P96F N120R C158S",6
"lib2","SARS-CoV-2","GCCCCTAGCAACTGAA",6,166.36,10.77,-0.07,0.03,2.91,1.1,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","GCCCCTATTGTTACAC",1,55.94,7.55,-3.29,0.2,1.5,1.06,0.01,">1 nonsynonymous","Q79V G166K T201G",3
"lib2","SARS-CoV-2","GCCCCTCATGGGATTA",5,71.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T85M G172K",2
"lib2","SARS-CoV-2","GCCCCTCCAATTGTGT",10,41.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N13G S36L S53D Y91S E135M G152F",6
"lib2","SARS-CoV-2","GCCCCTCCGATTGACA",7,137.64,10.59,-0.25,0.03,2.9,1.04,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","GCCCCTCCGCTTACAG",1,15.25,10.79,-0.05,0.07,2.96,1.08,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","GCCCCTCGGCCCTATC",6,103.31,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S129C C158Q",2
"lib2","SARS-CoV-2","GCCCCTGAAATTACTT",5,33.9,9.07,-1.77,0.14,1.93,1.08,0.01,">1 nonsynonymous","N58C F134I",2
"lib2","SARS-CoV-2","GCCCCTGACAACGAAG",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P G86H F126C P149W P191G",5
"lib2","SARS-CoV-2","GCCCCTGCATATTTAG",10,4.52,NA,NA,NA,NA,NA,NA,"stop","N13Y D34H L131* Q176K",4
"lib2","SARS-CoV-2","GCCCCTGCTGATGGCC",2,17.07,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y143Q C158V F185A",3
"lib2","SARS-CoV-2","GCCCCTGGAATTTTCT",9,26.26,6.22,-4.62,0.74,1.5,1.19,0.02,">1 nonsynonymous","T100P S129F",2
"lib2","SARS-CoV-2","GCCCCTTTCGTTGGAC",2,38.11,8.16,-2.68,0.19,1.5,1.08,0.01,">1 nonsynonymous","N58I C102W",2
"lib2","SARS-CoV-2","GCCCGAAAATACGCAT",7,2.99,NA,NA,NA,NA,NA,NA,"stop","C6A L60F Q84* V103A",4
"lib2","SARS-CoV-2","GCCCGAAATTAACAGA",16,0.94,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","GCCCGAACGTCACGCC",2,37.72,10.03,-0.81,0.07,2.82,1.13,0,">1 nonsynonymous","K56S P161S",2
"lib2","SARS-CoV-2","GCCCGAACTTCAGTAA",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F K48V F99E Y121L P149M",5
"lib2","SARS-CoV-2","GCCCGAAGATAAATGT",4,3.2,NA,NA,NA,NA,NA,NA,"stop","D98A R136S P149I G155* P197L",5
"lib2","SARS-CoV-2","GCCCGAAGGCCAATCC",3,52.81,9,-1.84,0.18,1.89,1.05,0.02,">1 nonsynonymous","I72Y K128G N151D",3
"lib2","SARS-CoV-2","GCCCGAATAGAGGCAA",4,40.63,10.86,0.03,0.11,2.78,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCCGAATGCCTTTCT",3,14.96,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16V V103A",2
"lib2","SARS-CoV-2","GCCCGACCTAATTAAT",5,33.58,6,-4.84,2,3,1.19,0,"1 nonsynonymous","G101A",1
"lib2","SARS-CoV-2","GCCCGACTCAAACCCT",4,40.21,10.67,-0.16,0.06,2.86,1.16,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","GCCCGACTTATTACCA",7,13.48,NA,NA,NA,NA,NA,NA,"stop","I2Q D34S S45T S139T L162*",5
"lib2","SARS-CoV-2","GCCCGAGCAAATAGAA",9,46.54,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","G9E W23C N40T C49L T85D D90R F99T P177S",8
"lib2","SARS-CoV-2","GCCCGAGCCAGAAGCA",11,17.86,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S43K I88A I142M C150F",4
"lib2","SARS-CoV-2","GCCCGAGGGAAATCTT",12,10.04,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I28S F47L A81R G86I V181E",5
"lib2","SARS-CoV-2","GCCCGCAACGAGTAAA",1,6.79,10.56,-0.28,0.12,2.97,1,0,">1 nonsynonymous","D98H N120M",2
"lib2","SARS-CoV-2","GCCCGCACCTATCCTA",1,16.42,9.72,-1.12,0.14,2.57,1.13,0.01,">1 nonsynonymous","Y35N Q163R G196C",3
"lib2","SARS-CoV-2","GCCCGCATGTTGCACA",3,53.51,10.78,-0.05,0.06,2.89,1.15,0,">1 nonsynonymous","I2Q T140E",2
"lib2","SARS-CoV-2","GCCCGCCACAAAGGGC",11,218.44,10.83,0,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCCGCCGCCCTCATG",1,3.5,NA,NA,NA,NA,NA,NA,"stop","P82* C102P S139H",3
"lib2","SARS-CoV-2","GCCCGCGCTGCGATTT",10,201.02,10.32,-0.52,0.03,2.94,1.06,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","GCCCGCTATGCACAAT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133M T148W",2
"lib2","SARS-CoV-2","GCCCGGAAAACATTAG",5,0.5,NA,NA,NA,NA,NA,NA,"stop","G9S N30* P54H A105L I142M P149R G155C",7
"lib2","SARS-CoV-2","GCCCGGAATATGCTGG",10,168.02,9.39,-1.44,0.07,2.14,1.05,0,">1 nonsynonymous","F8S K87R",2
"lib2","SARS-CoV-2","GCCCGGACTAGTTATT",6,61.04,10.87,0.03,0.04,3,1.02,0,">1 nonsynonymous","S29R L188S",2
"lib2","SARS-CoV-2","GCCCGGAGGGAGCAAG",6,80.68,10.78,-0.06,0.04,2.93,1.08,0,"1 nonsynonymous","N110I",1
"lib2","SARS-CoV-2","GCCCGGCCACGGTCCC",3,41.65,10.7,-0.14,0.06,2.95,1.07,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","GCCCGGGCCTGAACAA",1,561.55,8.54,-2.29,0.07,2.07,1.03,0,">1 nonsynonymous","G9R S43K G83N A89I F156L",5
"lib2","SARS-CoV-2","GCCCGTAACTATATAT",5,33.4,8.72,-2.11,0.14,1.5,1.05,0.01,">1 nonsynonymous","N40Y K128F P161A",3
"lib2","SARS-CoV-2","GCCCGTACGGGTATGA",8,154.4,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y143K L162E",2
"lib2","SARS-CoV-2","GCCCGTATAAATTGTT",4,7.62,10.03,-0.8,0.26,2.07,1.09,0.03,">1 nonsynonymous","F99L E141F",2
"lib2","SARS-CoV-2","GCCCGTCACCTAAATA",3,0.45,NA,NA,NA,NA,NA,NA,"stop","D97R Y119F Y175*",3
"lib2","SARS-CoV-2","GCCCGTCCGTCTAATT",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S G83Y",2
"lib2","SARS-CoV-2","GCCCGTGACATGAAAC",1,27.8,9.8,-1.04,0.08,2.25,1,0,">1 nonsynonymous","D97E A105T G152Y",3
"lib2","SARS-CoV-2","GCCCGTGCCCACCCTG",1,2.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","GCCCGTTCAACAAGAA",13,160.99,9.93,-0.9,0.04,2.44,1.03,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","GCCCGTTTCACCGCAA",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31K W106L D112S Y119L K128A T201L",6
"lib2","SARS-CoV-2","GCCCTAAAATGCGTAT",5,4.37,NA,NA,NA,NA,NA,NA,"stop","D90G G101* N118C V173F",4
"lib2","SARS-CoV-2","GCCCTAAACAATCAAA",7,202.21,6.28,-4.55,0.48,1.5,1.19,0.01,">1 nonsynonymous","P7E Q163L P177T",3
"lib2","SARS-CoV-2","GCCCTAAACTCTTTAA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","T140L C150* A190R",3
"lib2","SARS-CoV-2","GCCCTAAAGAGCAAAG",2,0.21,NA,NA,NA,NA,NA,NA,"stop","D90* F167W",2
"lib2","SARS-CoV-2","GCCCTAAATGAACTCG",11,174.65,10.87,0.03,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GCCCTAAATGACAGAA",15,174.33,10.08,-0.76,0.04,2.67,1.03,0,">1 nonsynonymous","K26Q A105Y",2
"lib2","SARS-CoV-2","GCCCTAAATTGTAGTT",5,74.29,10.2,-0.64,0.05,2.79,1.06,0,">1 nonsynonymous","L57I I142T",2
"lib2","SARS-CoV-2","GCCCTAAGAATAAATG",1,10.74,10.82,-0.02,0.1,3,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCCCTAATATGATAAA",4,22.71,6.25,-4.58,0.74,1.5,1.07,0.03,">1 nonsynonymous","D68R G83D",2
"lib2","SARS-CoV-2","GCCCTAATATTTAAAT",5,57.16,10.53,-0.31,0.06,2.97,1.05,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","GCCCTAATCAAACCGT",13,46.62,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D34L F99S W106R Y123T Y178S",5
"lib2","SARS-CoV-2","GCCCTACACCTTCGCA",4,47.93,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K56R L95M T100F D137K",4
"lib2","SARS-CoV-2","GCCCTACACGTAGAAG",3,21.3,8.96,-1.87,0.1,2.72,1.2,0,">1 nonsynonymous","Y66T Q168C T201C",3
"lib2","SARS-CoV-2","GCCCTACGAAGCCACT",3,0,NA,NA,NA,NA,NA,NA,"stop","P7N F47I P82Y D98N N110S K114F F156*",7
"lib2","SARS-CoV-2","GCCCTACTAACAGCAG",8,115.51,10.92,0.09,0.05,2.88,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GCCCTACTATTCGCTA",9,39.4,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","D98A A105L A190I",3
"lib2","SARS-CoV-2","GCCCTAGAATCACTAT",9,140.91,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29V R73I P149L Y178W",4
"lib2","SARS-CoV-2","GCCCTAGATACCAGAA",1,16.25,7.34,-3.5,0.3,1.87,1.14,0.02,"1 nonsynonymous","C150A",1
"lib2","SARS-CoV-2","GCCCTATATCCTACGT",11,175.92,9.05,-1.79,0.05,2.05,1.07,0,">1 nonsynonymous","E10G S45F K87C",3
"lib2","SARS-CoV-2","GCCCTATGTCGCACAT",9,5.83,NA,NA,NA,NA,NA,NA,"stop","T170Q P197*",2
"lib2","SARS-CoV-2","GCCCTATTTCTGATCT",11,48.62,6,-4.84,2,1.91,1.13,0.01,">1 nonsynonymous","T85Y P161L",2
"lib2","SARS-CoV-2","GCCCTCAATATTAGAG",4,68.42,10.43,-0.4,0.05,2.85,1.1,0,"1 nonsynonymous","A14H",1
"lib2","SARS-CoV-2","GCCCTCACCAATTATA",5,0.5,NA,NA,NA,NA,NA,NA,"stop","S19* F44C D97* F160N",4
"lib2","SARS-CoV-2","GCCCTCACGCCGTCCG",4,109.56,10.06,-0.78,0.06,2.34,1.02,0,">1 nonsynonymous","K48R V77T T85G N130S",4
"lib2","SARS-CoV-2","GCCCTCATGAATGCGT",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S F62W W106Y G152R K199R",5
"lib2","SARS-CoV-2","GCCCTCATTTCGTTTA",5,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P P54V D98S R179I",4
"lib2","SARS-CoV-2","GCCCTCCCCCCACACA",5,89.09,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S19L N40H G51V N64D D98F",5
"lib2","SARS-CoV-2","GCCCTCCCCCGAACTA",8,6.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R N110P N151C",3
"lib2","SARS-CoV-2","GCCCTCCCGCTATTAT",4,64.73,10.9,0.06,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCCTCCCTAATGAAA",1,45.43,9.02,-1.82,0.09,2.02,1.05,0,">1 nonsynonymous","K56A T63Y N118Y S139D",4
"lib2","SARS-CoV-2","GCCCTCGAGGGGCATT",1,59.17,6.34,-4.5,0.37,1.5,1.12,0.01,"1 nonsynonymous","P177V",1
"lib2","SARS-CoV-2","GCCCTCGCCTGCCGCC",1,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L Q84L W106A G166W",4
"lib2","SARS-CoV-2","GCCCTGAAAGAGACAT",7,101.13,9.66,-1.17,0.05,2.94,1.08,0,"1 nonsynonymous","R73A",1
"lib2","SARS-CoV-2","GCCCTGAAAGTAGGAA",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S C150D F167N",3
"lib2","SARS-CoV-2","GCCCTGAGATATCCTC",6,103.68,8.5,-2.33,0.14,1.96,1.1,0.01,">1 nonsynonymous","A14R Q84L E154F",3
"lib2","SARS-CoV-2","GCCCTGATACGAGACT",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L T15V S43R D90P G172T",5
"lib2","SARS-CoV-2","GCCCTGCTTGTGGAAC",16,2.64,NA,NA,NA,NA,NA,NA,"stop","V115* Y143F",2
"lib2","SARS-CoV-2","GCCCTGGATAAGACGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S29K T55* V173K",3
"lib2","SARS-CoV-2","GCCCTGTCCCCAAGGT",1,8.54,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","L38Q D97L S139V F156S",4
"lib2","SARS-CoV-2","GCCCTGTGCGCGCAGC",3,7.6,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","D34I A105L D112R",3
"lib2","SARS-CoV-2","GCCCTTAAATGGAAGG",3,29.02,9.76,-1.07,0.07,3,1.06,0,">1 nonsynonymous","N64C Y159F",2
"lib2","SARS-CoV-2","GCCCTTAACAAGCCAT",6,93.1,10.47,-0.37,0.04,2.84,1.09,0,"1 nonsynonymous","S139M",1
"lib2","SARS-CoV-2","GCCCTTAACACAGATA",1,12.4,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","Y39S F44I G83V I88V T170A Y178S",6
"lib2","SARS-CoV-2","GCCCTTAATTGAAAAC",2,1.25,NA,NA,NA,NA,NA,NA,"stop","L5* S43T V115Y P177S",4
"lib2","SARS-CoV-2","GCCCTTACATAATTCG",5,79.53,10.15,-0.68,0.06,2.7,1.08,0,">1 nonsynonymous","F47W D98V",2
"lib2","SARS-CoV-2","GCCCTTACGTGTTACA",1,8.27,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","E76V Y91W Y143L G155S",4
"lib2","SARS-CoV-2","GCCCTTATATCCAGGC",2,35.67,10.11,-0.72,0.11,2.64,1.03,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","GCCCTTCAAACAACTA",1,18.07,8.21,-2.62,0.19,2.72,1.12,0.01,">1 nonsynonymous","K87N I104L I142R",3
"lib2","SARS-CoV-2","GCCCTTCAAGCATAGT",1,20.47,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S69A C150R V173N",3
"lib2","SARS-CoV-2","GCCCTTCCCAAACTGG",5,98.41,10.71,-0.12,0.04,2.89,1.04,0,">1 nonsynonymous","S164M G174S",2
"lib2","SARS-CoV-2","GCCCTTCCCCGGTCTA",4,11.1,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","Y50N F167L G172R",3
"lib2","SARS-CoV-2","GCCCTTCCCTTAGTCA",21,157.8,8.25,-2.58,0.12,2.58,1.05,0,">1 nonsynonymous","V37L N58M S113Y K199G",4
"lib2","SARS-CoV-2","GCCCTTGAGCCGCTAA",4,83.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44C Y50P L125S A192T",4
"lib2","SARS-CoV-2","GCCCTTGAGGACTCGT",2,7.82,10.27,-0.57,0.06,3,1.01,0,">1 nonsynonymous","C6W Y35I",2
"lib2","SARS-CoV-2","GCCCTTGGGCCCCTAA",10,1.2,NA,NA,NA,NA,NA,NA,"stop","L122* E141P",2
"lib2","SARS-CoV-2","GCCCTTGTCCCGCTGC",1,0.38,NA,NA,NA,NA,NA,NA,"stop","A18R Q79E I88* S113R K128A G174F",6
"lib2","SARS-CoV-2","GCCCTTTAGACCACAC",4,54.17,9.69,-1.15,0.07,1.99,1.04,0,">1 nonsynonymous","L5D L38N",2
"lib2","SARS-CoV-2","GCCCTTTCCCCAACCG",5,104.09,9.96,-0.87,0.06,2.91,1.06,0,">1 nonsynonymous","A14S F126H",2
"lib2","SARS-CoV-2","GCCCTTTGAATATAAC",4,99.68,10.43,-0.41,0.05,2.89,1.07,0,"1 nonsynonymous","F185I",1
"lib2","SARS-CoV-2","GCCCTTTTCTAGAGGG",7,33.72,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N1M Y35N V103W F126R",4
"lib2","SARS-CoV-2","GCCGAAAACCAACTAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","V115* G152S",2
"lib2","SARS-CoV-2","GCCGAAAACTAGAAAA",11,155.28,10.85,0.01,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGAAAACTATGAAT",8,0.79,NA,NA,NA,NA,NA,NA,"stop","N4S F17* I88W V115E G152Y",5
"lib2","SARS-CoV-2","GCCGAAAAGCAAACAA",5,331.05,8.34,-2.49,0.12,2.4,1.04,0.01,">1 nonsynonymous","I2D P96S G166F S184V",4
"lib2","SARS-CoV-2","GCCGAAACCCTATTCT",1,11.25,10.34,-0.49,0.1,2.99,1,0,">1 nonsynonymous","N64T S147L Y178T",3
"lib2","SARS-CoV-2","GCCGAAACTTTATAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P Y93L",2
"lib2","SARS-CoV-2","GCCGAAAGAAAACCAT",2,46,10.3,-0.53,0.05,2.89,1.09,0,"1 nonsynonymous","E135K",1
"lib2","SARS-CoV-2","GCCGAAATAACTCTCA",2,57.43,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F12L K87L G146L G166T",4
"lib2","SARS-CoV-2","GCCGAAATGATAAAAT",4,40.86,9.78,-1.06,0.11,2.17,1.01,0,">1 nonsynonymous","I88L D97G",2
"lib2","SARS-CoV-2","GCCGAAATTCATACAC",12,47.43,6.16,-4.68,1.04,1.5,1.23,0.02,">1 nonsynonymous","C49K I138V",2
"lib2","SARS-CoV-2","GCCGAACACCTTATTA",3,12.84,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y21G V71S S129H T170W",4
"lib2","SARS-CoV-2","GCCGAACCCGCGAATC",4,41.77,8.8,-2.04,0.15,1.73,1.08,0.01,">1 nonsynonymous","I80L G155V",2
"lib2","SARS-CoV-2","GCCGAACCTTGCTGGA",8,90.54,8.13,-2.71,0.14,2.07,1.12,0.01,">1 nonsynonymous","N110R N157P",2
"lib2","SARS-CoV-2","GCCGAACTATAATGCC",3,54.82,6,-4.84,1.91,1.5,1.23,0.02,">1 nonsynonymous","F70R I104T K128G",3
"lib2","SARS-CoV-2","GCCGAACTCTGGTTGA",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18C W106M D137W",3
"lib2","SARS-CoV-2","GCCGAAGAATCCCAAA",3,57.65,6,-4.84,2,1.5,1.1,0.01,"1 nonsynonymous","P161L",1
"lib2","SARS-CoV-2","GCCGAAGGACCAACAT",7,113.8,10.7,-0.13,0.06,2.97,1.07,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","GCCGAAGGGTTATACC",4,0,NA,NA,NA,NA,NA,NA,"stop","A14* C158N",2
"lib2","SARS-CoV-2","GCCGAATAAGGTTATC",2,23.89,8.9,-1.94,0.25,1.95,1,0.03,">1 nonsynonymous","T55V D98I Y119L P149A",4
"lib2","SARS-CoV-2","GCCGAATGTAACCATA",8,28.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62I V103E",2
"lib2","SARS-CoV-2","GCCGAATTCGGGATTT",4,47.25,9.79,-1.05,0.09,2.35,1.02,0,">1 nonsynonymous","C61I I88L",2
"lib2","SARS-CoV-2","GCCGACAAAACTTATG",1,20.54,8.61,-2.22,0.17,1.98,1.15,0.01,">1 nonsynonymous","D98H N107V",2
"lib2","SARS-CoV-2","GCCGACAAAGAAAACT",2,13.47,10.98,0.14,0.09,2.79,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGACAAAGACCAAC",16,56.19,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","D34L L38S N92L",3
"lib2","SARS-CoV-2","GCCGACAAGGATTAAG",7,6.44,NA,NA,NA,NA,NA,NA,"stop","S41E W106* Y143A V153L",4
"lib2","SARS-CoV-2","GCCGACAATAATAAGA",24,185.76,10.02,-0.81,0.06,2.21,1.03,0,">1 nonsynonymous","S29R Y91R",2
"lib2","SARS-CoV-2","GCCGACAGATAATGAC",3,20.37,6,-4.84,1.67,1.5,1.18,0.05,">1 nonsynonymous","Y119C R127L I138G",3
"lib2","SARS-CoV-2","GCCGACAGCCACCTGC",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L I104R",2
"lib2","SARS-CoV-2","GCCGACATTTACAACG",8,198.27,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T55F P82F F99L S129A E141L",5
"lib2","SARS-CoV-2","GCCGACCGATACATTT",4,138.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9I R25V Y50M",3
"lib2","SARS-CoV-2","GCCGACCGCCACTTTC",12,143.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68M N107L",2
"lib2","SARS-CoV-2","GCCGACCTCGGCGTAA",1,26.38,10.66,-0.17,0.07,2.97,1.03,0,">1 nonsynonymous","K56T K199L",2
"lib2","SARS-CoV-2","GCCGACGCTAGATCTC",6,79.26,10.15,-0.69,0.06,2.67,1.04,0,">1 nonsynonymous","L60M D112I",2
"lib2","SARS-CoV-2","GCCGACTAGTTCGAGT",4,213.8,10.63,-0.2,0.02,2.94,1.04,0,"1 nonsynonymous","G116W",1
"lib2","SARS-CoV-2","GCCGACTCTAACTTGA",8,188.14,8.56,-2.28,0.11,2.85,1.1,0,">1 nonsynonymous","R27T K128H G166E",3
"lib2","SARS-CoV-2","GCCGAGAATTCCCAAA",9,43.71,10.86,0.03,0.06,2.91,1.11,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","GCCGAGAGACTAAACC",7,7.45,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R27F D34S K48D S113M T170S",5
"lib2","SARS-CoV-2","GCCGAGCAATACTATT",1,39.94,10.75,-0.08,0.05,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGAGCAATATTCAA",6,35.7,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N92W Y121F F167G",3
"lib2","SARS-CoV-2","GCCGAGCACCGATATA",11,54.86,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G9V C49L A81T K94Y Y143L",5
"lib2","SARS-CoV-2","GCCGAGCACTCCCGGA",1,11.72,10.99,0.16,0.1,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGAGCCGTATTTTT",8,90.6,10.31,-0.53,0.02,2.91,1.09,0,">1 nonsynonymous","T100Y V115P G146W",3
"lib2","SARS-CoV-2","GCCGAGCGTATGGGTC",1,1.96,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCCGAGCTTACTAATT",7,67.33,10.73,-0.1,0.07,2.99,1.03,0,"1 nonsynonymous","V153T",1
"lib2","SARS-CoV-2","GCCGAGGAAAGCTTTA",1,19.67,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F44C P96S V103I K132W P149S T201E",6
"lib2","SARS-CoV-2","GCCGATATATACAACA",9,119.98,10.65,-0.19,0.04,2.94,1.05,0,">1 nonsynonymous","G9E D90C",2
"lib2","SARS-CoV-2","GCCGATATGTAGCCTA",4,3.15,NA,NA,NA,NA,NA,NA,"stop","R16F N64V F134Y E135*",4
"lib2","SARS-CoV-2","GCCGATCACATAATGT",2,0.83,NA,NA,NA,NA,NA,NA,"stop","P96N W106* S113* V153T F167A",5
"lib2","SARS-CoV-2","GCCGATCACGACCCAA",4,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L C61W P96V R124C",4
"lib2","SARS-CoV-2","GCCGATGCCCCCTTTG",6,123.84,10.7,-0.13,0.02,2.9,1.09,0,"1 nonsynonymous","F47W",1
"lib2","SARS-CoV-2","GCCGATGTCCCCCTTG",13,115.33,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V20R G83R L131R",3
"lib2","SARS-CoV-2","GCCGATGTTACCTGAG",4,114.37,10.71,-0.13,0.06,2.93,1.09,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","GCCGATTAAGATTAAG",14,169.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N30L F62L G74A A105V P133S T170K V181Y G196I",8
"lib2","SARS-CoV-2","GCCGATTCTACCAGCA",6,41.94,10.72,-0.12,0.06,3,1.01,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","GCCGATTGGCCCCATA",8,55.81,8,-2.84,0.3,1.5,1.06,0.03,">1 nonsynonymous","F12E S41L K87S",3
"lib2","SARS-CoV-2","GCCGATTTGTGAACTA",7,95.3,10.51,-0.32,0.05,2.88,1.08,0,">1 nonsynonymous","N40T G146A",2
"lib2","SARS-CoV-2","GCCGCAATGACACGTG",6,33.66,7.3,-3.53,0.36,1.5,1.2,0.05,">1 nonsynonymous","F47G N120I Q168W",3
"lib2","SARS-CoV-2","GCCGCACAAACACTTG",6,149.83,9.99,-0.85,0.04,2.81,1.04,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","GCCGCACATAGTCCAC",10,99.81,6,-4.84,1.85,1.5,1.16,0.02,">1 nonsynonymous","S113Y L162F",2
"lib2","SARS-CoV-2","GCCGCACCACATATAC",5,0.87,NA,NA,NA,NA,NA,NA,"stop","E10S A14Y C61T E141* S200K",5
"lib2","SARS-CoV-2","GCCGCACCCAAACGAG",8,119.45,7.42,-3.42,0.12,1.66,1.14,0,">1 nonsynonymous","N4D C150S S200E",3
"lib2","SARS-CoV-2","GCCGCACCTACATCGA",2,28.95,10.78,-0.05,0.06,2.98,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGCATAACTACAAT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Q Q84L D98E Q144P Y165M",5
"lib2","SARS-CoV-2","GCCGCATCACCTAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A D90C",2
"lib2","SARS-CoV-2","GCCGCATGGCCCTCTT",4,60.55,8.05,-2.78,0.14,1.93,1.1,0.01,">1 nonsynonymous","C6S S41Q K56C G166C",4
"lib2","SARS-CoV-2","GCCGCATTCCGAGCAA",2,16.09,6.85,-3.99,0.48,1.5,1.11,0.07,">1 nonsynonymous","W23T Q79A Y119A A190G",4
"lib2","SARS-CoV-2","GCCGCCAAGCCACGAC",1,33.78,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","F44T Q176Y",2
"lib2","SARS-CoV-2","GCCGCCCACGGCAACA",5,27.17,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S19R K26V G146C S184F",4
"lib2","SARS-CoV-2","GCCGCCCCATATGACC",4,36.74,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V77A D98G G117V",3
"lib2","SARS-CoV-2","GCCGCCCTATTCGAGC",38,3.89,NA,NA,NA,NA,NA,NA,"stop","A14M D68I D97N E135*",4
"lib2","SARS-CoV-2","GCCGCCGGATAGATCA",7,112.94,10.17,-0.66,0.07,2.58,1.05,0,"1 nonsynonymous","C49F",1
"lib2","SARS-CoV-2","GCCGCCTTAGTCACCT",7,93.66,10.21,-0.62,0.06,2.68,1,0,"1 nonsynonymous","I72T",1
"lib2","SARS-CoV-2","GCCGCGAAATTCCAAT",8,113.82,6.87,-3.96,0.26,1.5,1.13,0.01,">1 nonsynonymous","V37Q A89R D97P Y175H",4
"lib2","SARS-CoV-2","GCCGCGACAATAAAAC",9,18.32,6,-4.84,2,3,1.38,0.05,">1 nonsynonymous","L5W P82H Y91L A105L",4
"lib2","SARS-CoV-2","GCCGCGACGTAATGCT",7,70.9,7.15,-3.69,0.35,1.5,1.17,0.04,"1 nonsynonymous","C49Q",1
"lib2","SARS-CoV-2","GCCGCGATCACCATCG",9,96.95,9.12,-1.71,0.19,1.5,1.12,0.02,">1 nonsynonymous","Y50L Q84S",2
"lib2","SARS-CoV-2","GCCGCGATGTTTGCCA",11,42.58,9.64,-1.2,0.37,1.5,1,0.07,">1 nonsynonymous","T15R L57I L95S V153G",4
"lib2","SARS-CoV-2","GCCGCGATTTTCATGA",1,21.1,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","G86S Y143P",2
"lib2","SARS-CoV-2","GCCGCGCAACATAAAA",1,29.11,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","T15V R25S S113T",3
"lib2","SARS-CoV-2","GCCGCGCCAATTTTAT",2,27.21,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G86V P161Q",2
"lib2","SARS-CoV-2","GCCGCGCGCGAATACT",2,5.05,NA,NA,NA,NA,NA,NA,"stop","C6Q K56* P96T",3
"lib2","SARS-CoV-2","GCCGCGCTTCGAAGCG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","V32* T100S Y165L",3
"lib2","SARS-CoV-2","GCCGCGGAAAAAACTA",2,72.4,8.84,-2,0.08,2.34,1.09,0,">1 nonsynonymous","N118M E141C",2
"lib2","SARS-CoV-2","GCCGCTAAATAACCAA",1,5.93,NA,NA,NA,NA,NA,NA,"stop","V37* N120Q S129G",3
"lib2","SARS-CoV-2","GCCGCTACGTGGACCT",15,56.51,6.42,-4.42,0.57,1.5,1.09,0.04,">1 nonsynonymous","Y50P A105K P197L",3
"lib2","SARS-CoV-2","GCCGCTAGAGGAATTA",4,70.27,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N151T F167I",2
"lib2","SARS-CoV-2","GCCGCTCTAATGCCGT",10,193.09,10.69,-0.15,0.03,2.93,1.05,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","GCCGCTGGTGCCCAGC",14,8.28,NA,NA,NA,NA,NA,NA,"stop","K56* V103K S129N",3
"lib2","SARS-CoV-2","GCCGCTTAACAACAAG",2,25.24,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","A14I Q144P Q176R A190G",4
"lib2","SARS-CoV-2","GCCGCTTACATCCTGG",7,42.36,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22S V37R F99T N130Q V182N K198L",6
"lib2","SARS-CoV-2","GCCGCTTTGGCAATTA",13,280.4,10.09,-0.75,0.03,2.96,1.03,0,">1 nonsynonymous","N24K N118V",2
"lib2","SARS-CoV-2","GCCGGAACCATGGGGT",12,129.84,8.01,-2.83,0.24,1.5,1.06,0.02,">1 nonsynonymous","S41W N107I",2
"lib2","SARS-CoV-2","GCCGGACCTTTTCAAC",5,104.87,8.85,-1.99,0.07,2.56,1.08,0,">1 nonsynonymous","S108V G174K",2
"lib2","SARS-CoV-2","GCCGGACGCTGATGGC",3,24.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P82D N157S F167S K198R",4
"lib2","SARS-CoV-2","GCCGGACTGACCGGTG",2,44.73,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D34E G86V",2
"lib2","SARS-CoV-2","GCCGGACTGGTTCTAG",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40A P54G",2
"lib2","SARS-CoV-2","GCCGGAGAGTTCACCT",5,62.02,9.99,-0.85,0.06,2.66,1.04,0,">1 nonsynonymous","Y35T T85C",2
"lib2","SARS-CoV-2","GCCGGAGATTACCAGG",4,112.15,10.11,-0.73,0.06,2.71,1.05,0,">1 nonsynonymous","F44R T140G V173E",3
"lib2","SARS-CoV-2","GCCGGAGGTTCAAATT",12,114.52,10.17,-0.66,0.04,2.72,1.01,0,">1 nonsynonymous","D34K N171I",2
"lib2","SARS-CoV-2","GCCGGATAATAACGAA",1,12.31,8.94,-1.9,0.21,1.5,1.05,0.02,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","GCCGGATGGATCTCTG",1,20.46,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14E L60T G83Y A89C D137H",5
"lib2","SARS-CoV-2","GCCGGCACGCAGGCTT",7,11.76,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","L57G V103R N110W",3
"lib2","SARS-CoV-2","GCCGGCAGATGACACA",4,71.8,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R73T N107Y",2
"lib2","SARS-CoV-2","GCCGGCCCACCTCAGA",10,0.12,NA,NA,NA,NA,NA,NA,"stop","P7Q R16F S36* D59H P161S",5
"lib2","SARS-CoV-2","GCCGGCCTTGCACCCA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","A42S N58R D97*",3
"lib2","SARS-CoV-2","GCCGGCGAACTAGTGA",6,71.64,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R73S E135R N157T",3
"lib2","SARS-CoV-2","GCCGGCTACCACTGTT",4,95.22,10.39,-0.44,0.04,2.98,1,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","GCCGGCTCAACAAACG",1,20.41,6.64,-4.19,0.41,1.5,1.04,0.02,">1 nonsynonymous","D90L Y159R",2
"lib2","SARS-CoV-2","GCCGGCTGCGCACGAA",10,86.51,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20E S139P Y165H A192T",4
"lib2","SARS-CoV-2","GCCGGCTTAAGAGAAA",6,22.94,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V20T N92G F99L",3
"lib2","SARS-CoV-2","GCCGGCTTATAATGAC",1,28.31,10.05,-0.79,0.09,2.86,1.05,0,">1 nonsynonymous","G117R Q163Y",2
"lib2","SARS-CoV-2","GCCGGGAAAACAATAG",2,7.14,8.35,-2.49,0.21,2.22,1.03,0.02,">1 nonsynonymous","C6S F62L G74E",3
"lib2","SARS-CoV-2","GCCGGGCACAACAACG",2,0.74,NA,NA,NA,NA,NA,NA,"stop","F12G S19* V37L S41F",4
"lib2","SARS-CoV-2","GCCGGTAAACACTGTA",9,85.31,9.97,-0.87,0.1,2.14,1.01,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","GCCGGTCACCCTGCCG",7,18.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y50E C61L P177R",3
"lib2","SARS-CoV-2","GCCGGTGAATTGTATG",4,24.97,8.52,-2.31,0.15,2.07,1.09,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","GCCGGTGCAGACCATA",7,43.46,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6N S45L Q79K Y119P",4
"lib2","SARS-CoV-2","GCCGTAAAAAACAACA",3,0.6,NA,NA,NA,NA,NA,NA,"stop","C49N T100S S139C G155*",4
"lib2","SARS-CoV-2","GCCGTAAAAAATAGTG",1,39.41,8.62,-2.21,0.24,1.9,1.16,0.02,">1 nonsynonymous","Y123E G155T",2
"lib2","SARS-CoV-2","GCCGTAAAAAATCTGT",3,33.84,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T46S D68W Y143Q N151S",4
"lib2","SARS-CoV-2","GCCGTAAAAATAGGGA",4,1.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","GCCGTAAAAATATAAA",14,228.07,10.83,-0.01,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCGTAAACGATCCAC",2,7.65,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N13D G86W N92M K114F",4
"lib2","SARS-CoV-2","GCCGTAAGGCATAACT",1,0.15,NA,NA,NA,NA,NA,NA,"stop","T85* Y175F",2
"lib2","SARS-CoV-2","GCCGTACAAGACCACA",7,116.77,8.83,-2.01,0.07,2.38,1.09,0,"1 nonsynonymous","Y165V",1
"lib2","SARS-CoV-2","GCCGTACAATAAACAG",4,57.29,9.55,-1.28,0.05,2.02,1.06,0,">1 nonsynonymous","T46D R136Y",2
"lib2","SARS-CoV-2","GCCGTACCGAATGTGG",14,186.95,10.69,-0.15,0.05,2.93,1.05,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","GCCGTACGTATTTACG",8,31.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N1T P82Y Q84K D137N L183M",5
"lib2","SARS-CoV-2","GCCGTAGCCGATCGTT",6,69.44,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","G86V L162C",2
"lib2","SARS-CoV-2","GCCGTATAATGATTAT",4,23.44,10.52,-0.32,0.07,2.9,1.1,0,">1 nonsynonymous","D97H N171Q",2
"lib2","SARS-CoV-2","GCCGTATATCAGACAA",2,9.48,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","F17M K48W D90G D97G G146C",5
"lib2","SARS-CoV-2","GCCGTATATGAACCCA",2,17.29,9.85,-0.99,0.14,2.45,1.04,0.01,">1 nonsynonymous","G9R N64R G83A D90K S129T V153K L188F",7
"lib2","SARS-CoV-2","GCCGTATCATTCTCTA",5,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66C V77M I104L",3
"lib2","SARS-CoV-2","GCCGTCACCTATCCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","T15A N40R L60* A81T F156S R179*",6
"lib2","SARS-CoV-2","GCCGTCCGTTTCTTAG",6,52.02,6.18,-4.65,0.69,1.5,1.18,0.02,">1 nonsynonymous","W23K D34Q N110T",3
"lib2","SARS-CoV-2","GCCGTCGACAATGGCA",1,12.42,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","V37D D68T V77A T148S G172N",5
"lib2","SARS-CoV-2","GCCGTCTGAGCTGAGT",6,17.21,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T15C Q163Y Q168P K198Q",4
"lib2","SARS-CoV-2","GCCGTCTTGAACATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","C61R A105*",2
"lib2","SARS-CoV-2","GCCGTGACCCACTAAC",1,11.03,6,-4.84,2,3,1.23,0.04,">1 nonsynonymous","F44S T55C N64S K87S Y119M P149S",6
"lib2","SARS-CoV-2","GCCGTGCCCTCTCCAA",1,31.95,10.24,-0.6,0.04,2.92,1.05,0,">1 nonsynonymous","S45R D59S",2
"lib2","SARS-CoV-2","GCCGTGTCACAGATAA",5,40.11,6.28,-4.56,0.66,1.5,1.12,0.02,">1 nonsynonymous","F99R L162S",2
"lib2","SARS-CoV-2","GCCGTTAAGAGACACA",3,7.51,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y21F R27Y K48N Y165M",4
"lib2","SARS-CoV-2","GCCGTTACGCAGGTAT",12,151.46,9.44,-1.39,0.17,1.62,1.09,0.01,">1 nonsynonymous","I2F I80L V173S",3
"lib2","SARS-CoV-2","GCCGTTAGTCGTGCCG",7,89.28,10.59,-0.24,0.04,2.99,1.02,0,">1 nonsynonymous","S41T D59H G152K",3
"lib2","SARS-CoV-2","GCCGTTATTCTCTATC",4,14.58,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S19R P82D F99P N157T",4
"lib2","SARS-CoV-2","GCCGTTCAGGTCAAAA",3,19.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4S D112F R127S",3
"lib2","SARS-CoV-2","GCCGTTCATTTCCAAC",3,90.71,10.65,-0.18,0.04,2.96,1.04,0,">1 nonsynonymous","S43P T100Q N120K S164N",4
"lib2","SARS-CoV-2","GCCGTTCTAACTAAAA",7,49.25,6,-4.84,1.63,1.5,1.3,0.03,">1 nonsynonymous","G101E I142F N157K",3
"lib2","SARS-CoV-2","GCCGTTCTGTTATGGG",5,95.84,10.47,-0.37,0.04,2.91,1.07,0,">1 nonsynonymous","P54Y E141L",2
"lib2","SARS-CoV-2","GCCGTTGACAAAGCTT",5,276.57,10.36,-0.47,0.05,2.82,1.04,0,">1 nonsynonymous","Q168H Q176R",2
"lib2","SARS-CoV-2","GCCGTTGATGACCTAG",9,238.89,10.61,-0.23,0.03,2.92,1.06,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","GCCGTTGATGGGCTTT",10,143.05,8.3,-2.54,0.14,2.93,1.02,0.01,">1 nonsynonymous","D97W F126S",2
"lib2","SARS-CoV-2","GCCGTTGCCGAATATC",4,2.28,NA,NA,NA,NA,NA,NA,"stop","A33L Y93N N107*",3
"lib2","SARS-CoV-2","GCCGTTGTCCAATGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2L F8* S19T Y35Q K87R K94L W106S T201W",8
"lib2","SARS-CoV-2","GCCGTTTAACAAGAAA",3,87.43,10.85,0.01,0.07,2.83,1.11,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","GCCGTTTACAAATATC",4,116.53,10.94,0.11,0.07,2.92,1.06,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","GCCGTTTATTAACCGT",8,72.46,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","A42K K87Q V103L L122W Y143H P161I",6
"lib2","SARS-CoV-2","GCCGTTTGCATTACCC",3,15.72,7.76,-3.08,0.3,1.5,1.1,0.04,">1 nonsynonymous","N40S Y50L N130I",3
"lib2","SARS-CoV-2","GCCGTTTTAAAAGCCA",14,202.99,9.84,-0.99,0.05,2.14,1.04,0,">1 nonsynonymous","V32S I104S",2
"lib2","SARS-CoV-2","GCCGTTTTGGAAAAAG",2,24.12,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","K94C R179T A190T",3
"lib2","SARS-CoV-2","GCCTAAAAAGACATCT",9,1.05,NA,NA,NA,NA,NA,NA,"stop","L38M V77K G101*",3
"lib2","SARS-CoV-2","GCCTAAAACGCGGTAA",4,16.53,7.53,-3.3,0.49,1.5,1.01,0.07,">1 nonsynonymous","A81V C102L E154L",3
"lib2","SARS-CoV-2","GCCTAAAAGTACCAAT",1,9.9,10.39,-0.45,0.17,2.79,1.26,0.01,">1 nonsynonymous","I2K K87Y",2
"lib2","SARS-CoV-2","GCCTAAACTCACACCC",3,41.73,9.78,-1.06,0.11,2.62,1.1,0,">1 nonsynonymous","N64K L131M F160V",3
"lib2","SARS-CoV-2","GCCTAAAGCCTGCAAC",5,26.2,10.55,-0.29,0.05,3,1.01,0,">1 nonsynonymous","N120K S139D S184N",3
"lib2","SARS-CoV-2","GCCTAAAGGGTGGCTT",10,123.39,10.78,-0.05,0.05,2.95,1.05,0,">1 nonsynonymous","V37G S53Q",2
"lib2","SARS-CoV-2","GCCTAAATATAATAGC",9,93,10.46,-0.37,0.04,2.82,1.12,0,">1 nonsynonymous","S41N K114D H189N",3
"lib2","SARS-CoV-2","GCCTAACAAATGCTTA",7,31.08,9.82,-1.01,0.09,2.18,1.1,0,">1 nonsynonymous","A33T S45L",2
"lib2","SARS-CoV-2","GCCTAACAACCCAAAA",16,2.88,NA,NA,NA,NA,NA,NA,"stop","T55H V77E T85E K94Q A105*",5
"lib2","SARS-CoV-2","GCCTAACAAGTTAGCC",2,55.66,10.11,-0.73,0.09,2.52,1.06,0,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","GCCTAACACATTTCAA",3,63.48,10.82,-0.01,0.05,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTAACCAACATAAA",2,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G V103S",2
"lib2","SARS-CoV-2","GCCTAACCATTCTAAG",4,1.65,NA,NA,NA,NA,NA,NA,"stop","C61K W106A L122*",3
"lib2","SARS-CoV-2","GCCTAACCTAGCATAA",4,24.87,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N30E T46H V103N Y123K",4
"lib2","SARS-CoV-2","GCCTAACGGCCTGGTC",7,73.77,9.87,-0.97,0.08,2.14,1.05,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","GCCTAACTATAGGCAT",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R V71A G86R E135R T148L P169V",6
"lib2","SARS-CoV-2","GCCTAACTATTCCTAG",2,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143P F185R",2
"lib2","SARS-CoV-2","GCCTAAGACAACTAGA",3,10.74,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","A105R R124H P161S",3
"lib2","SARS-CoV-2","GCCTAAGATCAGGATC",23,513.98,10.72,-0.12,0.03,2.95,1.06,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","GCCTAAGCAAACGCAT",8,5.32,10.6,-0.23,0.56,2.62,1.07,0.05,">1 nonsynonymous","L57Q P177L",2
"lib2","SARS-CoV-2","GCCTAAGCGTAATTAG",3,3.53,NA,NA,NA,NA,NA,NA,"stop","T15I T148*",2
"lib2","SARS-CoV-2","GCCTAAGTCCTAGACA",4,12.68,8.86,-1.97,0.07,1.87,1.09,0,">1 nonsynonymous","A14S V37G P133M E141I",4
"lib2","SARS-CoV-2","GCCTAAGTGTTCTAAA",6,82.74,10.75,-0.09,0.04,2.97,1.06,0,">1 nonsynonymous","Y39G L111Q",2
"lib2","SARS-CoV-2","GCCTAATAAAAGACTA",5,9.86,10.78,-0.06,0.07,2.9,1.14,0,"1 nonsynonymous","N151C",1
"lib2","SARS-CoV-2","GCCTAATAACCATATA",4,28.85,9.13,-1.7,0.07,2.82,1.1,0,">1 nonsynonymous","F8L C61F Y119F R136K",4
"lib2","SARS-CoV-2","GCCTAATACAAAAGCA",2,16.08,8.6,-2.23,0.1,2.72,1.06,0,">1 nonsynonymous","N4S R27G L125Y",3
"lib2","SARS-CoV-2","GCCTAATCACTTAATC",5,93.85,10.33,-0.5,0.06,2.8,1.04,0,">1 nonsynonymous","S41D T100F E135I",3
"lib2","SARS-CoV-2","GCCTAATCCTGTTACT",3,29.22,10.29,-0.54,0.08,2.91,1,0,">1 nonsynonymous","V32S T46C K114A V173I",4
"lib2","SARS-CoV-2","GCCTAATCTGAGACCT",4,16.29,10.87,0.03,0.07,2.97,1.05,0,"1 nonsynonymous","S43T",1
"lib2","SARS-CoV-2","GCCTAATGATATAAAA",1,13.94,6,-4.84,2,1.5,1.09,0.05,">1 nonsynonymous","R27P S45R C61P A89V C102W L122N",6
"lib2","SARS-CoV-2","GCCTAATTACCAACAT",8,57.56,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","R27L A89E D98V",3
"lib2","SARS-CoV-2","GCCTAATTTTCGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","V11F S36* D59N T63M V77T P96L K132D V181K",8
"lib2","SARS-CoV-2","GCCTACAATGGTAAAA",1,57.22,10.74,-0.1,0.04,2.95,1.07,0,">1 nonsynonymous","N4D V37S F62A K114H",4
"lib2","SARS-CoV-2","GCCTACACTATGGCCA",1,44.91,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","GCCTACACTCATTAAG",6,44.58,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","S29F D112A I142Q F167L",4
"lib2","SARS-CoV-2","GCCTACAGGAAAAAAT",2,58.05,10.72,-0.11,0.05,2.9,1.08,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","GCCTACATTAACAGAG",7,132.56,8.46,-2.38,0.08,2.21,1.08,0,">1 nonsynonymous","G83C D90L N118R",3
"lib2","SARS-CoV-2","GCCTACCGTATAATTA",14,272.43,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F12I Q84F D97R G146N E154L Q168P",6
"lib2","SARS-CoV-2","GCCTACCTAGTGAATG",3,31.73,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y50L T85G A105R Y121L",4
"lib2","SARS-CoV-2","GCCTACCTCAACATCG",2,55.38,10.79,-0.04,0.03,2.98,1.04,0,"1 nonsynonymous","N110Y",1
"lib2","SARS-CoV-2","GCCTACCTCTCTGACA",3,108.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2V S29R C61M K87L L122V Y159Q Y165Q",7
"lib2","SARS-CoV-2","GCCTACGAAGACACGG",4,69.44,7.54,-3.3,0.11,2.73,1.13,0,">1 nonsynonymous","C61V F126S F156V",3
"lib2","SARS-CoV-2","GCCTACGATATGAATA",6,195.07,9.52,-1.32,0.03,2.9,1.08,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","GCCTACGTTAATAGGT",10,49.7,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F12E Y50D G86M I104V F156R",5
"lib2","SARS-CoV-2","GCCTACTTAACAAAAG",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q C49N R73S D90M C102L N107L L131M",7
"lib2","SARS-CoV-2","GCCTAGAAAATCTTTA",12,99.88,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39K Y119A Q144C L183H T201V",5
"lib2","SARS-CoV-2","GCCTAGAAACCACCAA",2,33.64,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S45Q C158D",2
"lib2","SARS-CoV-2","GCCTAGAACAATTTCA",5,0.7,NA,NA,NA,NA,NA,NA,"stop","F47L V77Y P96* T148S",4
"lib2","SARS-CoV-2","GCCTAGAACTCAATCC",1,0,NA,NA,NA,NA,NA,NA,"stop","F12V Y39* C49F L57G R78T F134S",6
"lib2","SARS-CoV-2","GCCTAGACAGATGATG",8,132.61,10.83,0,0.03,2.95,1.05,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","GCCTAGACTATGACCA",1,29.9,10.33,-0.5,0.05,3,1.02,0,">1 nonsynonymous","L95I G155N",2
"lib2","SARS-CoV-2","GCCTAGATGACGACTA",2,23.51,6,-4.84,0.94,1.5,1.09,0.01,">1 nonsynonymous","K94I E135L",2
"lib2","SARS-CoV-2","GCCTAGATTATGTACG",6,74.24,10.81,-0.03,0.05,2.92,1.1,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","GCCTAGGAAAACGACC",17,309.53,10.84,0,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTAGGCACCAGTCT",4,21.74,10.94,0.1,0.05,2.99,1,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","GCCTAGGTACAGGAAC",6,101.76,9.5,-1.33,0.08,1.99,1.03,0,">1 nonsynonymous","D98G N107S E141Q",3
"lib2","SARS-CoV-2","GCCTAGGTTTGACGTG",8,72.01,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V71P R136P",2
"lib2","SARS-CoV-2","GCCTATAACCTCGGCC",6,199.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14V S19L S53D F99H S147E Q176K",6
"lib2","SARS-CoV-2","GCCTATAAGTCAAATT",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35E F99M S139G",3
"lib2","SARS-CoV-2","GCCTATAATAAAAGAC",2,12.43,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","Y35I G83L K87G E141I E154W",5
"lib2","SARS-CoV-2","GCCTATACGCGCAAGG",3,32.06,10.34,-0.5,0.04,2.95,1.03,0,">1 nonsynonymous","E10A D90N G146A",3
"lib2","SARS-CoV-2","GCCTATACGGATCACG",4,13.58,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6F E135S T140Y G174L",4
"lib2","SARS-CoV-2","GCCTATATATGGTAAG",4,31.77,9.65,-1.19,0.05,2.99,1.05,0,">1 nonsynonymous","A42R N157D",2
"lib2","SARS-CoV-2","GCCTATATTAGTTCAA",4,107.69,10.79,-0.05,0.04,2.93,1.09,0,"1 nonsynonymous","V32H",1
"lib2","SARS-CoV-2","GCCTATCGGACATCAG",8,74.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51K P96Y",2
"lib2","SARS-CoV-2","GCCTATCTATACGTCG",2,19.55,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N1R F12Q D59N I88L Y93R K128S",6
"lib2","SARS-CoV-2","GCCTATCTCACCGGCT",13,128.15,10.88,0.04,0.05,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GCCTATGCACTAAGAA",2,14.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9R P82M F99K",3
"lib2","SARS-CoV-2","GCCTATGCGTCCCCCG",13,196.17,10.76,-0.08,0.03,2.98,1.02,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GCCTATGGCAAGAGTC",1,21.79,9.47,-1.36,0.08,2.78,1.05,0,">1 nonsynonymous","T100A G155Q G174K",3
"lib2","SARS-CoV-2","GCCTATTTCCTTAACT",6,81.5,10.77,-0.07,0.08,2.88,1.11,0,"1 nonsynonymous","T63Y",1
"lib2","SARS-CoV-2","GCCTCAAAAATAGAAT",4,74.58,10.85,0.01,0.05,2.94,1.06,0,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","GCCTCAAAGGAGTTGA",2,63.88,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R27V G146W Y165Q",3
"lib2","SARS-CoV-2","GCCTCAACGCTACCTA",4,3.1,NA,NA,NA,NA,NA,NA,"stop","P82K L125*",2
"lib2","SARS-CoV-2","GCCTCAACTACCATAA",2,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K A33S D34G A42W C61D R127V A145S",7
"lib2","SARS-CoV-2","GCCTCAAGGAGTTTTC",7,139.72,9.88,-0.96,0.07,2.33,1.02,0,">1 nonsynonymous","S41R E135W T201S",3
"lib2","SARS-CoV-2","GCCTCAATATCAATAC",2,49.03,10.81,-0.03,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTCACAGCAACGAT",8,69.49,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","E10Y T46P P54N Y91V K132T Y165S",6
"lib2","SARS-CoV-2","GCCTCACATAAGAGGT",4,56.01,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N24V T100A N107H S139A",4
"lib2","SARS-CoV-2","GCCTCACCTATAGAGG",2,78.42,8.38,-2.46,0.09,2.83,1.03,0,">1 nonsynonymous","C150E Q163A",2
"lib2","SARS-CoV-2","GCCTCACGACAGCATG",7,64.54,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A18R T46S D97M Y159E",4
"lib2","SARS-CoV-2","GCCTCAGATTTAAAAG",3,29.56,6.13,-4.7,0.56,1.5,1.08,0.01,">1 nonsynonymous","F44V L95Q Y175V",3
"lib2","SARS-CoV-2","GCCTCAGTACACATTT",3,8.44,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","S19G L95H K114L E135T",4
"lib2","SARS-CoV-2","GCCTCATAACAAAAAG",11,203.13,10.65,-0.18,0.03,2.96,1.06,0,">1 nonsynonymous","T46F K128S",2
"lib2","SARS-CoV-2","GCCTCATACTGCCCTT",6,41.45,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","F12V D90T D98I S108R",4
"lib2","SARS-CoV-2","GCCTCATTTTTGGTAC",6,1.64,NA,NA,NA,NA,NA,NA,"stop","N13* A18I C61S P161G G196R",5
"lib2","SARS-CoV-2","GCCTCCAAGTACACGT",11,90.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86F P149L Q176L",3
"lib2","SARS-CoV-2","GCCTCCATCAGTGTCC",6,92.66,9.98,-0.86,0.09,2.24,1.05,0,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","GCCTCCCACCTGTGAC",13,115.46,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","G172V",1
"lib2","SARS-CoV-2","GCCTCCCCAACGCAGG",11,21.65,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","N24A S53L Y91V Y121S S139R E186I",6
"lib2","SARS-CoV-2","GCCTCCCTATTGATTT",13,47.21,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L60Q F99D",2
"lib2","SARS-CoV-2","GCCTCCGAACCCTGGA",4,25.27,9.87,-0.97,0.34,1.5,1,0.06,">1 nonsynonymous","G51F C61A I138S T170W F185I",5
"lib2","SARS-CoV-2","GCCTCCGCACAAAAAA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V G86L N92E N120M S139C",5
"lib2","SARS-CoV-2","GCCTCCTGGGGCCTGG",5,140.01,6,-4.84,2,3,1.15,0,">1 nonsynonymous","W23E S53D Y143D N151Y",4
"lib2","SARS-CoV-2","GCCTCCTTCAGATATC",1,0.68,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","GCCTCGCAAGTGTGAA",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V F156N G174R",3
"lib2","SARS-CoV-2","GCCTCGGCCATATTGA",4,60.03,9.9,-0.93,0.1,2.68,1.05,0,">1 nonsynonymous","C6S D98S",2
"lib2","SARS-CoV-2","GCCTCGGGCTTATGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W A14S V52L D59I A192T",5
"lib2","SARS-CoV-2","GCCTCGGTTTAGCCGC",5,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H A33Y Y50V F99K T148Y K198P",6
"lib2","SARS-CoV-2","GCCTCGTAAACGATCG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","F62W Y143*",2
"lib2","SARS-CoV-2","GCCTCTAAGATAAGAT",6,122.88,10.76,-0.08,0.04,2.91,1.1,0,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","GCCTCTAATCCATTAA",27,266.53,9.84,-1,0.06,2.04,1,0,">1 nonsynonymous","F44S T100Q E135A",3
"lib2","SARS-CoV-2","GCCTCTAATCCCAAAA",17,174.3,10.72,-0.12,0.03,2.83,1.14,0,">1 nonsynonymous","E141T N151S",2
"lib2","SARS-CoV-2","GCCTCTACTATGCCAG",1,68.31,10.82,-0.01,0.04,2.94,1.08,0,">1 nonsynonymous","S53H S200Y",2
"lib2","SARS-CoV-2","GCCTCTCAGCGCTTCA",2,7.84,7.42,-3.41,0.53,1.5,1.07,0.04,">1 nonsynonymous","F12Y G51V D98V",3
"lib2","SARS-CoV-2","GCCTCTCATGCATACT",2,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49M Y119G F134D",3
"lib2","SARS-CoV-2","GCCTCTCGCTATAAAG",2,18.81,9.85,-0.98,0.29,1.54,1.06,0.04,">1 nonsynonymous","N120V L131F",2
"lib2","SARS-CoV-2","GCCTCTGAGTGTATAC",10,296.5,7.54,-3.3,0.13,1.5,1.07,0.01,">1 nonsynonymous","I2D V37Y G155M Q176S",4
"lib2","SARS-CoV-2","GCCTCTGGTACCCGTA",16,82.52,7.43,-3.4,0.3,1.5,1.15,0.02,">1 nonsynonymous","C6F K94G",2
"lib2","SARS-CoV-2","GCCTCTTTAACTCGAC",1,34.57,10.36,-0.47,0.06,2.91,1.01,0,">1 nonsynonymous","A14G P149D",2
"lib2","SARS-CoV-2","GCCTGAAAATTATTTG",8,2.36,NA,NA,NA,NA,NA,NA,"stop","N118*",1
"lib2","SARS-CoV-2","GCCTGAAACCAGCCCC",1,9.16,8.36,-2.47,0.13,1.79,1.08,0.01,">1 nonsynonymous","C6I F17S T201H",3
"lib2","SARS-CoV-2","GCCTGAACACTTAATC",8,88.49,10.16,-0.68,0.1,2.4,1,0,"1 nonsynonymous","P96C",1
"lib2","SARS-CoV-2","GCCTGAACCTCATGAG",2,48.76,10.76,-0.08,0.07,2.95,1.05,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","GCCTGAACGCTAACAT",6,136.69,8.23,-2.6,0.19,1.75,1.11,0.01,">1 nonsynonymous","R73W K87R",2
"lib2","SARS-CoV-2","GCCTGAACTTGAAGTT",13,39.44,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","N13F A105I F126L I138P V180I",5
"lib2","SARS-CoV-2","GCCTGAATACGTCTGG",3,145.23,10.42,-0.42,0.03,2.91,1.06,0,">1 nonsynonymous","K56N D98E G146A S200G",4
"lib2","SARS-CoV-2","GCCTGAATTTAAATTA",15,303.69,10.39,-0.45,0.03,2.88,1.07,0,">1 nonsynonymous","A105G K199L",2
"lib2","SARS-CoV-2","GCCTGACATCTGACAC",7,46.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T85M D98Y N157R T201E",4
"lib2","SARS-CoV-2","GCCTGACCCGCTAAAC",7,171.17,10.81,-0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTGACGCTGGCGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T A42Q C49T L125P",4
"lib2","SARS-CoV-2","GCCTGAGAGACAACGA",2,61.18,10.69,-0.14,0.05,2.9,1.11,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","GCCTGAGATTTGATCT",3,75.16,9.35,-1.49,0.06,2.11,1.02,0,">1 nonsynonymous","T63E S139H G155W",3
"lib2","SARS-CoV-2","GCCTGAGTAAAGGATG",4,0.07,NA,NA,NA,NA,NA,NA,"stop","D34V L122N E141K E154*",4
"lib2","SARS-CoV-2","GCCTGATACCTCATGA",2,6.57,NA,NA,NA,NA,NA,NA,"stop","V37K Q84K G101D D112* G152K",5
"lib2","SARS-CoV-2","GCCTGATCCGATACAG",1,36.91,10.7,-0.13,0.06,2.94,1.07,0,">1 nonsynonymous","V37L F44H",2
"lib2","SARS-CoV-2","GCCTGATCTAAAATAC",7,747.36,8.91,-1.93,0.04,2.97,1.03,0,">1 nonsynonymous","V37G P149I G166T",3
"lib2","SARS-CoV-2","GCCTGATGTCTAATGG",6,64.04,6,-4.84,1.7,1.5,1.15,0.01,">1 nonsynonymous","G101V Y119G I142C",3
"lib2","SARS-CoV-2","GCCTGCAAAGAGTAAA",3,8.84,6,-4.84,2,1.53,1.25,0.06,">1 nonsynonymous","N1F R16P K56P D68I N120A N171F",6
"lib2","SARS-CoV-2","GCCTGCACTTGTTTTA",3,22.15,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","Y50C L57K D112L F156V",4
"lib2","SARS-CoV-2","GCCTGCCCATTTTTCT",1,23.15,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","R124E E141S S184P A192I",4
"lib2","SARS-CoV-2","GCCTGCGAAGATAGTT",8,192.29,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y91M N130A Y175G",3
"lib2","SARS-CoV-2","GCCTGCGATAATAAAT",8,109.85,8.64,-2.19,0.12,1.57,1.05,0.01,">1 nonsynonymous","R16K S43R D90S R179T",4
"lib2","SARS-CoV-2","GCCTGCGGAACGAATT",5,26.85,10.06,-0.77,0.06,2.97,1,0,">1 nonsynonymous","Y35H T148M",2
"lib2","SARS-CoV-2","GCCTGCTAACCATCAG",8,109.8,10.01,-0.83,0.1,2.18,1.05,0,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","GCCTGCTAGACTTCGG",2,97.86,10.62,-0.22,0.04,2.99,1.02,0,">1 nonsynonymous","L5I G155S",2
"lib2","SARS-CoV-2","GCCTGGAATAGGCTGA",2,5.39,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S19T K26E A105H",3
"lib2","SARS-CoV-2","GCCTGGAATGTAAACA",20,13.92,NA,NA,NA,NA,NA,NA,"stop","R27* T55S Q176P",3
"lib2","SARS-CoV-2","GCCTGGACCTCAGAAT",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112K N130E",2
"lib2","SARS-CoV-2","GCCTGGTACATACATT",9,93.19,10.78,-0.05,0.09,2.77,1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCCTGGTGAGATCCGT",3,1.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","GCCTGGTGCACGAAAA",4,24.64,7.9,-2.93,0.16,1.98,1.09,0.01,">1 nonsynonymous","A14S G74S I142M G174T",4
"lib2","SARS-CoV-2","GCCTGTAAAAAACCGG",8,5.5,NA,NA,NA,NA,NA,NA,"stop","L60I R124* T201V",3
"lib2","SARS-CoV-2","GCCTGTAAACTACATT",12,3,NA,NA,NA,NA,NA,NA,"stop","S41M Q84* D90P F99V P197T",5
"lib2","SARS-CoV-2","GCCTGTAATAAAATAA",9,119.38,8.36,-2.48,0.13,2.84,1.04,0.01,">1 nonsynonymous","I28V T170V",2
"lib2","SARS-CoV-2","GCCTGTAATGAGACCA",2,37.05,10.81,-0.03,0.04,3,1.02,0,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","GCCTGTACTGCCCCCG",7,33.18,10.68,-0.16,0.07,2.97,1,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","GCCTGTCACCGGCGCT",4,39.41,9.73,-1.1,0.09,2.07,1.01,0,">1 nonsynonymous","N4T Y50M",2
"lib2","SARS-CoV-2","GCCTGTGACGGTGTGG",14,252.3,9.18,-1.65,0.06,2.36,1.06,0,">1 nonsynonymous","L5R N107M",2
"lib2","SARS-CoV-2","GCCTGTGCACAGATTG",11,70.92,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6I S53T Y91M Y165M A192T",5
"lib2","SARS-CoV-2","GCCTGTTATTGGACAA",12,197.51,9.24,-1.6,0.05,2.32,1.06,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","GCCTGTTGCGGCAGAA",5,36.82,10.79,-0.05,0.07,2.97,1.06,0,">1 nonsynonymous","E10D V173E",2
"lib2","SARS-CoV-2","GCCTTAAAGGATCATT",6,93.23,8.68,-2.16,0.07,2.54,1.05,0,">1 nonsynonymous","Y35K T170R",2
"lib2","SARS-CoV-2","GCCTTAAAGGCAATTA",1,33.88,11,0.17,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTTAAGAACTAATA",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41M S69V G83N",3
"lib2","SARS-CoV-2","GCCTTAAGGCATAATA",2,6.76,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6V D68R C150D",3
"lib2","SARS-CoV-2","GCCTTAAGGTGACTAC",4,56.97,9.36,-1.48,0.16,1.62,1.04,0.01,"1 nonsynonymous","F17R",1
"lib2","SARS-CoV-2","GCCTTAATATGTTCTT",4,60.88,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","Y93S A145S",2
"lib2","SARS-CoV-2","GCCTTAATGGTTAACT",6,49.05,9.83,-1.01,0.06,2.13,1.09,0,"1 nonsynonymous","I28Q",1
"lib2","SARS-CoV-2","GCCTTACAATTGACAA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","W23S R78* P96H",3
"lib2","SARS-CoV-2","GCCTTACATATGCATA",5,50.53,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C49F W106N",2
"lib2","SARS-CoV-2","GCCTTACCCGGAGACT",10,186.77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37A K94D N107I",3
"lib2","SARS-CoV-2","GCCTTAGCTTAAGACA",3,18.89,10.41,-0.43,0.19,2.63,1.2,0.03,"1 nonsynonymous","P7Q",1
"lib2","SARS-CoV-2","GCCTTAGTATCTTCAC",22,713.52,10.65,-0.19,0.02,2.96,1.04,0,">1 nonsynonymous","L60W Q144R P197L",3
"lib2","SARS-CoV-2","GCCTTATACTGAAAGG",1,11.79,10.4,-0.43,0.06,2.92,1.03,0.01,"1 nonsynonymous","N118Q",1
"lib2","SARS-CoV-2","GCCTTATCAATAGATT",4,17.61,9.17,-1.67,0.07,2.88,1,0,">1 nonsynonymous","D97L S139V F156S",3
"lib2","SARS-CoV-2","GCCTTATGAAACTAGA",2,53.3,6,-4.84,2,1.5,1.38,0.05,">1 nonsynonymous","R16T N24M D112T Y119A",4
"lib2","SARS-CoV-2","GCCTTATGACGACCGT",13,340.52,10.85,0.01,0.05,2.91,1.07,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","GCCTTATTGAACGGTA",15,314.47,10.73,-0.11,0.02,2.96,1.05,0,"1 nonsynonymous","N64W",1
"lib2","SARS-CoV-2","GCCTTATTTAAGCACA",3,70.34,8.8,-2.03,0.06,2.08,1.08,0,">1 nonsynonymous","A81K N118M",2
"lib2","SARS-CoV-2","GCCTTCAAAAAGGAAT",1,27.11,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","W23K G83Y K94V I142F",4
"lib2","SARS-CoV-2","GCCTTCAAACCGTACT",7,99.47,8.07,-2.77,0.15,2.26,1.08,0.01,">1 nonsynonymous","S53T C158R",2
"lib2","SARS-CoV-2","GCCTTCCAAAGGTGAC",6,29.89,7.23,-3.61,0.51,1.5,1.19,0.06,">1 nonsynonymous","L5A D59T N120R F126T R136F",5
"lib2","SARS-CoV-2","GCCTTCCAACAGACCA",6,0.13,NA,NA,NA,NA,NA,NA,"stop","R16*",1
"lib2","SARS-CoV-2","GCCTTCCATACTTAGG",35,543.1,10.53,-0.3,0.03,2.9,1.07,0,">1 nonsynonymous","A14S L60I",2
"lib2","SARS-CoV-2","GCCTTCCGAGATTGAT",7,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M P96S D97L E141M",4
"lib2","SARS-CoV-2","GCCTTCCTAAATGTAG",7,155.16,9.79,-1.05,0.09,1.91,1.08,0,">1 nonsynonymous","N64R A105S V173S",3
"lib2","SARS-CoV-2","GCCTTCGCTAGATACA",10,162.24,6.01,-4.82,0.6,1.5,1.14,0.01,">1 nonsynonymous","Y165I Q176M",2
"lib2","SARS-CoV-2","GCCTTCGGGCCAATAG",3,31.73,10.96,0.12,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTTCTGAGAGGGAA",6,67.99,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5R G51Q L60E Y93R",4
"lib2","SARS-CoV-2","GCCTTGAAAAGTTAAG",3,10.3,10.72,-0.11,0.07,2.75,1.27,0,"1 nonsynonymous","S147V",1
"lib2","SARS-CoV-2","GCCTTGATAACTGAAG",7,0.04,NA,NA,NA,NA,NA,NA,"stop","G9K S29K K56R I88Y N107*",5
"lib2","SARS-CoV-2","GCCTTGCCCTGCTCAG",3,20.48,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N13F F156T R179Y",3
"lib2","SARS-CoV-2","GCCTTGCGGAATTCAT",1,18.62,8.31,-2.53,0.32,2.3,1.21,0.02,">1 nonsynonymous","D98N G146L",2
"lib2","SARS-CoV-2","GCCTTGCGGTACCTGC",8,89.92,10.86,0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCCTTGGCCTACAAAA",10,38.54,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D34P A89T Y121W I138G G146R F160S",6
"lib2","SARS-CoV-2","GCCTTGGCGCGCCCTG",4,50.64,10.16,-0.67,0.06,2.68,1,0,">1 nonsynonymous","G9A V77R",2
"lib2","SARS-CoV-2","GCCTTGGCTCAGTACA",3,31.14,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I80R D97G Y121L P149L",4
"lib2","SARS-CoV-2","GCCTTGGTAAAGTTTC",2,18.15,10.41,-0.42,0.09,2.83,1,0,"1 nonsynonymous","L162F",1
"lib2","SARS-CoV-2","GCCTTGTGAGGTTCAA",6,19.98,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G83R I142S G152S L183T",4
"lib2","SARS-CoV-2","GCCTTGTTGTACAAGC",9,37.61,9.57,-1.27,0.38,1.5,1,0.06,">1 nonsynonymous","A14C T46V S53H Q144Y",4
"lib2","SARS-CoV-2","GCCTTTAAACACTGGA",3,86.92,9.79,-1.05,0.1,2.32,1,0,">1 nonsynonymous","V11E S200H",2
"lib2","SARS-CoV-2","GCCTTTAACCGCCATC",1,9.84,10.03,-0.8,0.19,2.02,1.18,0.02,">1 nonsynonymous","R27F C49F",2
"lib2","SARS-CoV-2","GCCTTTAAGACCTAAT",12,38.06,8.08,-2.75,0.22,1.5,1.1,0.02,">1 nonsynonymous","S41P Y50T",2
"lib2","SARS-CoV-2","GCCTTTAAGGTCCATC",3,0,NA,NA,NA,NA,NA,NA,"stop","I104* S147G",2
"lib2","SARS-CoV-2","GCCTTTAGCCTTTAAT",1,32.73,10.78,-0.05,0.09,2.88,1.07,0.01,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","GCCTTTAGGTTACCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R A18K",2
"lib2","SARS-CoV-2","GCCTTTAGTGACTCGA",4,98.48,9.48,-1.36,0.07,2.75,1.11,0,">1 nonsynonymous","S36R T140P Y175H",3
"lib2","SARS-CoV-2","GCCTTTAGTGGTCTAT",13,23.27,6.84,-4,0.2,1.5,1.03,0.01,">1 nonsynonymous","C61W Q79K S113F S129A D137K P169L",6
"lib2","SARS-CoV-2","GCCTTTATACCTAGGA",1,5.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88R",1
"lib2","SARS-CoV-2","GCCTTTATAGACATAG",2,52.08,10.55,-0.29,0.12,2.64,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCCTTTATAGTGAGAT",1,1.7,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","GCCTTTATGAATAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","P7* F8L K26G D98T Y119R T148*",6
"lib2","SARS-CoV-2","GCCTTTATTTAGCAAT",1,12.22,8.7,-2.14,0.22,1.93,1.08,0.02,">1 nonsynonymous","C6N V173S",2
"lib2","SARS-CoV-2","GCCTTTCATAGTAGAA",4,37.42,6.49,-4.35,0.44,1.5,1.12,0.03,">1 nonsynonymous","L5I L60S N130W P149A P169C",5
"lib2","SARS-CoV-2","GCCTTTCGCGAGTCAT",2,23.88,9.38,-1.45,0.13,2.38,1.05,0.01,">1 nonsynonymous","N1L L5S R27E N120Y G174W",5
"lib2","SARS-CoV-2","GCCTTTCGTGAGATTT",7,124.9,10.14,-0.7,0.05,2.71,1.02,0,">1 nonsynonymous","D34W Q163K",2
"lib2","SARS-CoV-2","GCCTTTCGTGCCTATA",5,31.79,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","N4A L95G",2
"lib2","SARS-CoV-2","GCCTTTCTAGCACCCA",1,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43W N110A Y119I",3
"lib2","SARS-CoV-2","GCCTTTCTGTCTTACA",3,16.77,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V77G K94V P149E",3
"lib2","SARS-CoV-2","GCCTTTTACGGTAACA",4,52.92,6,-4.84,0.86,1.5,1.1,0.01,">1 nonsynonymous","F99K V173A R179M",3
"lib2","SARS-CoV-2","GCGAAAAAAATGGCAG",4,9.48,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","C102D D112E",2
"lib2","SARS-CoV-2","GCGAAAAAACCAGAAA",5,84.1,10.89,0.06,0.05,2.95,1.06,0,"1 nonsynonymous","S53V",1
"lib2","SARS-CoV-2","GCGAAAACAATGAGAA",6,118.23,9.17,-1.67,0.06,2.85,1.11,0,">1 nonsynonymous","A33L L125H",2
"lib2","SARS-CoV-2","GCGAAAACCAGCATAA",2,58.41,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N157V P177A",2
"lib2","SARS-CoV-2","GCGAAAAGGTTATAAG",1,1.79,NA,NA,NA,NA,NA,NA,"stop","V52L N120M L183*",3
"lib2","SARS-CoV-2","GCGAAAATGGATCCCG",3,17.41,8.41,-2.43,0.31,1.5,1.01,0.06,">1 nonsynonymous","F8M V65L I88T T201S",4
"lib2","SARS-CoV-2","GCGAAAATTAACGGCT",9,134.13,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G74T Y121K F160R P169A",4
"lib2","SARS-CoV-2","GCGAAAATTCTACTTT",3,14.27,8.41,-2.42,0.27,2.09,1.19,0.03,"1 nonsynonymous","F12D",1
"lib2","SARS-CoV-2","GCGAAACATAAAGTAT",7,91.55,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P54G A67S D90I",3
"lib2","SARS-CoV-2","GCGAAACATCCTTCAT",1,37.4,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","G9R F17I C61F R78N N92I N107I F156R",7
"lib2","SARS-CoV-2","GCGAAACCCTTACGGT",1,10.06,9.77,-1.07,0.29,2.2,1.1,0.02,">1 nonsynonymous","C6K I28R L57K I88V P191Y",5
"lib2","SARS-CoV-2","GCGAAACTAATACACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCGAAACTAGTAAAAA",9,117.39,8.17,-2.67,0.11,2.76,1.08,0,">1 nonsynonymous","F12M F126S",2
"lib2","SARS-CoV-2","GCGAAACTGTCAGCTA",2,82.41,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A14C Y165Q Y175S",3
"lib2","SARS-CoV-2","GCGAAACTTAATCACA",8,89.97,10.78,-0.06,0.05,2.92,1.08,0,"1 nonsynonymous","G9T",1
"lib2","SARS-CoV-2","GCGAAACTTATTTCGC",5,0.67,NA,NA,NA,NA,NA,NA,"stop","E10* V103N G116M",3
"lib2","SARS-CoV-2","GCGAAACTTCATACTA",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I R16I K56V V103F",4
"lib2","SARS-CoV-2","GCGAAAGAAATTAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y119* Y143A G152Y",3
"lib2","SARS-CoV-2","GCGAAAGATACGTTCT",1,104.61,10.57,-0.27,0.04,2.89,1.04,0,">1 nonsynonymous","A22N S41K",2
"lib2","SARS-CoV-2","GCGAAAGATGCCAAGC",8,54.49,7.31,-3.53,0.38,1.5,1.13,0.04,">1 nonsynonymous","L5P A22V G116V V182F",4
"lib2","SARS-CoV-2","GCGAAAGCACACATGC",4,58.1,8.38,-2.46,0.13,2.82,1.01,0.01,">1 nonsynonymous","F126R G152F",2
"lib2","SARS-CoV-2","GCGAAAGCCTTCTAAT",6,23.11,9.76,-1.08,0.09,2.17,1,0,">1 nonsynonymous","F12R D98N",2
"lib2","SARS-CoV-2","GCGAAATACCATCCCA",6,116.08,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E10S S19E F44A Q176R",4
"lib2","SARS-CoV-2","GCGAAATAGCTAGAAA",4,89.04,8.23,-2.61,0.14,2.22,1.07,0.01,">1 nonsynonymous","S19K Q168D",2
"lib2","SARS-CoV-2","GCGAAATCGACCGACA",8,131.43,10.85,0.02,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAAATCTGGTGAAC",2,0.33,NA,NA,NA,NA,NA,NA,"stop","L5* A33S F47L G51K K56G Q79T K94E Y123W",8
"lib2","SARS-CoV-2","GCGAAATTCTAGCGTT",8,75.83,10.8,-0.04,0.05,2.96,1.03,0,">1 nonsynonymous","N64A F160L",2
"lib2","SARS-CoV-2","GCGAACAAGAATACGT",9,42.03,6,-4.84,1,1.5,1.18,0.01,"1 nonsynonymous","G86P",1
"lib2","SARS-CoV-2","GCGAACAAGTAGACGT",4,35.93,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L95P W106V G152D",3
"lib2","SARS-CoV-2","GCGAACAGAGCCGAGA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","V37* G86V L95T",3
"lib2","SARS-CoV-2","GCGAACAGTATCTCCT",7,43.68,6.3,-4.54,0.53,1.5,1.18,0.01,">1 nonsynonymous","N40P D59C L131M V181L",4
"lib2","SARS-CoV-2","GCGAACATACAGCACC",3,0.5,NA,NA,NA,NA,NA,NA,"stop","C31N V65L D112*",3
"lib2","SARS-CoV-2","GCGAACCAAACGCTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","N4H A14T R27Q C61* Q176L K199N",6
"lib2","SARS-CoV-2","GCGAACCAACGTCCCG",3,48.33,10.91,0.08,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAACCGTAATAAGT",8,65.38,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A67D N120L",2
"lib2","SARS-CoV-2","GCGAACCTAGAACTAG",5,122.73,10.64,-0.2,0.03,2.98,1.03,0,">1 nonsynonymous","G51S T100V",2
"lib2","SARS-CoV-2","GCGAACCTTGACCCGA",2,9.36,8.77,-2.07,0.24,2.06,1.11,0.01,">1 nonsynonymous","F44S T55V T63L G174K",4
"lib2","SARS-CoV-2","GCGAACGACACCAAAT",3,10.28,6.32,-4.52,0.7,1.5,1.17,0.02,">1 nonsynonymous","G51Q F99Y Y119L F160A",4
"lib2","SARS-CoV-2","GCGAACGAGGATTTCA",9,140.53,10.88,0.05,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAACGGACTAAAGG",4,8.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14P K26I D59Y E186C",4
"lib2","SARS-CoV-2","GCGAACGTTTTTTATA",1,14.64,10.23,-0.6,0.07,2.81,1.06,0,">1 nonsynonymous","I2W V37C H189F",3
"lib2","SARS-CoV-2","GCGAACTAAACGGCTT",9,59.2,6,-4.84,2,3,1.21,0,">1 nonsynonymous","S43P Y119Q P161F P169Q",4
"lib2","SARS-CoV-2","GCGAACTAAAGCGTAA",1,36.72,9.98,-0.85,0.09,2.3,1.06,0,">1 nonsynonymous","D90K P133E",2
"lib2","SARS-CoV-2","GCGAACTAATCGGCCT",3,10.47,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","N64G F99M G116C",3
"lib2","SARS-CoV-2","GCGAACTCCAGATAAA",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y D112L Y143S",3
"lib2","SARS-CoV-2","GCGAACTGCACTAAGG",3,37.98,10.72,-0.12,0.03,2.94,1.07,0,"1 nonsynonymous","K48T",1
"lib2","SARS-CoV-2","GCGAACTTAACCAATA",17,159.31,10.73,-0.11,0.04,2.94,1.05,0,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","GCGAACTTATTAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","S41F N110* K128T",3
"lib2","SARS-CoV-2","GCGAAGAAATAAATAA",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C N30P T55N S69Q D97A N130I G155L",7
"lib2","SARS-CoV-2","GCGAAGACCGAAACTG",1,15.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T15D Y35Q K94M W106T G146D F167S",6
"lib2","SARS-CoV-2","GCGAAGACTGACATTA",9,126.34,10.66,-0.17,0.03,2.96,1.07,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","GCGAAGACTTGACTAC",1,0.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101P",1
"lib2","SARS-CoV-2","GCGAAGAGAATTTGTA",4,78.36,10.87,0.03,0.04,2.92,1.09,0,"1 nonsynonymous","T3D",1
"lib2","SARS-CoV-2","GCGAAGAGTAAACGCG",2,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91H W106K E141G P149S",4
"lib2","SARS-CoV-2","GCGAAGATTCACTTCA",3,66.57,10.81,-0.03,0.09,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAAGCACATAAGTA",2,0.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51D",1
"lib2","SARS-CoV-2","GCGAAGCACCAAATCG",1,15.3,6.11,-4.73,1,1.5,1.13,0.02,">1 nonsynonymous","T15L Y143K",2
"lib2","SARS-CoV-2","GCGAAGCATCTCCATT",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89T L125C G146P V180G",4
"lib2","SARS-CoV-2","GCGAAGCCAGCATCAC",2,45.78,10.83,0,0.12,2.58,1.16,0.01,"1 nonsynonymous","K132R",1
"lib2","SARS-CoV-2","GCGAAGCCAGTCATAA",4,26.26,6,-4.84,1.51,1.5,1.12,0.03,">1 nonsynonymous","C61I E141S V180P",3
"lib2","SARS-CoV-2","GCGAAGCCTCCAGTGC",6,0.88,NA,NA,NA,NA,NA,NA,"stop","G9L Q84* T100*",3
"lib2","SARS-CoV-2","GCGAAGCTAACCAGCG",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M G83L V103A E135V",4
"lib2","SARS-CoV-2","GCGAAGCTATACCCCA",2,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A F12M I104N",3
"lib2","SARS-CoV-2","GCGAAGGCCGAGTCGG",2,14.38,10.75,-0.09,0.07,2.97,1.05,0,"1 nonsynonymous","K114M",1
"lib2","SARS-CoV-2","GCGAAGGGCTGAAATA",14,81.92,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31R N58H I138M C158S",4
"lib2","SARS-CoV-2","GCGAAGTATTTAAGCA",3,66.35,8.92,-1.91,0.15,1.74,1.11,0.01,">1 nonsynonymous","T3S D59I L122A G146W H189Q A192V",6
"lib2","SARS-CoV-2","GCGAAGTCACGGGGAC",1,40.42,10.15,-0.69,0.04,2.99,1.04,0,">1 nonsynonymous","P149L G174T",2
"lib2","SARS-CoV-2","GCGAAGTTGAAAATGA",9,1.54,NA,NA,NA,NA,NA,NA,"stop","F12T L122P R127N E154*",4
"lib2","SARS-CoV-2","GCGAATAAAACGCACG",6,77.41,9.1,-1.74,0.09,2.81,1.09,0,">1 nonsynonymous","G117R K132N",2
"lib2","SARS-CoV-2","GCGAATAACGCAATTA",5,104.47,7.01,-3.83,0.27,1.5,1.13,0.01,">1 nonsynonymous","C6D F44I P177S S200E",4
"lib2","SARS-CoV-2","GCGAATACAAAAGAGA",8,32.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S P191F",2
"lib2","SARS-CoV-2","GCGAATACAATAAAAA",4,23.47,10.49,-0.35,0.08,2.82,1.17,0,"1 nonsynonymous","Q84N",1
"lib2","SARS-CoV-2","GCGAATACAGTTATTG",4,17.24,9.71,-1.13,0.12,2.08,1.12,0.01,">1 nonsynonymous","S19V P197W",2
"lib2","SARS-CoV-2","GCGAATATACTACCCT",2,146.5,10.34,-0.49,0.05,2.85,1.09,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","GCGAATATTACACACC",4,50.07,9.41,-1.42,0.1,1.92,1.05,0,">1 nonsynonymous","W106G T201P",2
"lib2","SARS-CoV-2","GCGAATATTTGATAAA",5,46.46,9.45,-1.38,0.07,2.77,1.27,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","GCGAATCAATGGTACG",1,16.12,6.91,-3.92,0.56,1.5,1.3,0.05,">1 nonsynonymous","K56D T85K D90Q V103L T140K",5
"lib2","SARS-CoV-2","GCGAATCCCTGGATTA",12,150.13,10.83,-0.01,0.03,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAATCGAGATACGT",8,101.32,10.93,0.1,0.05,2.94,1.07,0,"1 nonsynonymous","S53T",1
"lib2","SARS-CoV-2","GCGAATCGATAGACGT",5,139.62,10.81,-0.02,0.04,2.91,1.06,0,"1 nonsynonymous","Q144E",1
"lib2","SARS-CoV-2","GCGAATCTACCACCGG",2,75.75,10.56,-0.28,0.03,2.94,1.06,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","GCGAATGATATATCGT",17,294,9.91,-0.92,0.04,2.83,1.05,0,">1 nonsynonymous","I2A Y121S",2
"lib2","SARS-CoV-2","GCGAATGCAAGCAGCG",9,38.65,6.62,-4.22,0.69,1.5,1.22,0.06,">1 nonsynonymous","G101D W106V F126G F134H",4
"lib2","SARS-CoV-2","GCGAATGCAATATGTT",1,101.39,10.36,-0.47,0.03,2.86,1.03,0,"1 nonsynonymous","N107A",1
"lib2","SARS-CoV-2","GCGAATGCATCCTTCC",2,69.12,10.37,-0.47,0.03,2.92,1.06,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","GCGAATGTGGATACGA",3,57.38,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","N13Q S36W T85L K94M R127V",5
"lib2","SARS-CoV-2","GCGAATTCTTAATAAC",12,6.08,NA,NA,NA,NA,NA,NA,"stop","A14* S139R G166W Q176G",4
"lib2","SARS-CoV-2","GCGAATTGACAATATC",1,7.84,8.43,-2.41,0.24,1.93,1,0.01,">1 nonsynonymous","G74L L122A",2
"lib2","SARS-CoV-2","GCGAATTGACATGTCG",4,67.16,10.3,-0.54,0.27,1.5,1,0.04,">1 nonsynonymous","Y50H N64C V115R L122A P133S T148Y",6
"lib2","SARS-CoV-2","GCGAATTTTGCGGGTG",13,98.9,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K56Y L95G I142E",3
"lib2","SARS-CoV-2","GCGACAAAAAAGCGAT",8,99.86,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4T V37Y A89E P96V Y119R",5
"lib2","SARS-CoV-2","GCGACAAAAAAGGGAT",5,24.07,9.71,-1.13,0.11,2.22,1.08,0.01,">1 nonsynonymous","F44I N107C F160S L188R",4
"lib2","SARS-CoV-2","GCGACAAAATGACATT",4,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T C102M",2
"lib2","SARS-CoV-2","GCGACAAACAGCTTAG",4,72.04,10.42,-0.41,0.05,3,1.03,0,">1 nonsynonymous","P149H F156H",2
"lib2","SARS-CoV-2","GCGACAAATGGTAAGT",2,32.65,7.98,-2.85,0.15,1.97,1.05,0.01,">1 nonsynonymous","F8L N64S V77Q F126N",4
"lib2","SARS-CoV-2","GCGACAAATTTCAATA",2,117.53,10.91,0.08,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGACAACAGCGATAA",17,157.3,7.99,-2.85,0.2,1.5,1.11,0.01,">1 nonsynonymous","E135G Y165R P197T",3
"lib2","SARS-CoV-2","GCGACACAAACACGAC",4,38.13,9.34,-1.5,0.05,3,1.05,0,">1 nonsynonymous","L5Y N24S D90S K114G",4
"lib2","SARS-CoV-2","GCGACACCTTCAGAAC",2,103.24,9.71,-1.12,0.08,2.38,1.07,0,">1 nonsynonymous","F12V D90E N110V",3
"lib2","SARS-CoV-2","GCGACACGGGTCCGAG",2,21.11,11.03,0.19,0.06,2.91,1.09,0,">1 nonsynonymous","D98N N120S",2
"lib2","SARS-CoV-2","GCGACACGTACCGATT",9,1.18,NA,NA,NA,NA,NA,NA,"stop","E10D D34V V103* Y121L",4
"lib2","SARS-CoV-2","GCGACACGTCTAGGGA",4,36.41,10.8,-0.04,0.05,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGACACGTCTCCGGC",1,28.63,10.88,0.05,0.03,2.93,1.07,0,">1 nonsynonymous","N130K T201L",2
"lib2","SARS-CoV-2","GCGACACTTTAGATAC",3,40.01,8.11,-2.72,0.26,1.54,1.11,0.03,">1 nonsynonymous","C31V K94C",2
"lib2","SARS-CoV-2","GCGACAGAAAAAATAA",2,40.67,9.5,-1.34,0.1,2,1.06,0,">1 nonsynonymous","C6T A14S S184R",3
"lib2","SARS-CoV-2","GCGACAGAACTAACCC",2,48.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44E K56V Y121K P169W",4
"lib2","SARS-CoV-2","GCGACAGCATCAACTT",3,46.2,9.65,-1.18,0.08,2.48,1.1,0,">1 nonsynonymous","N1Y A14T Q168N",3
"lib2","SARS-CoV-2","GCGACAGGTACTCTAC",4,26.38,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82R Y93S W106A A145R G174P",5
"lib2","SARS-CoV-2","GCGACAGTTGTAACGG",1,6.92,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Y35H V103K",2
"lib2","SARS-CoV-2","GCGACATAAATAGCAA",12,105.53,10.41,-0.42,0.05,2.81,1.09,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","GCGACATAAGCTGCTG",4,65.84,10.76,-0.07,0.03,2.97,1.05,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","GCGACATCGATTCTGG",11,53.76,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S45I P82A Y165N T201C",4
"lib2","SARS-CoV-2","GCGACATGTACACGGC",8,51.41,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K56P A81P D98F S129V N157C P169Y T201S",7
"lib2","SARS-CoV-2","GCGACATTAGGACTGG",9,3.11,NA,NA,NA,NA,NA,NA,"stop","F47V C61I D68* D90L E141R A190V",6
"lib2","SARS-CoV-2","GCGACCCTTTCCGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S Y39V L187T",3
"lib2","SARS-CoV-2","GCGACCGGGCCCATTG",7,14.78,6.75,-4.08,0.58,1.5,1.21,0.06,">1 nonsynonymous","C6D T15D I88T N171V",4
"lib2","SARS-CoV-2","GCGACGACTCTTTATG",7,1.21,NA,NA,NA,NA,NA,NA,"stop","F44L N171S V181* K199N",4
"lib2","SARS-CoV-2","GCGACGCATGGCCCGG",2,47.35,10.27,-0.56,0.07,2.73,1.1,0,">1 nonsynonymous","I2L G9E S36T D90T T140R",5
"lib2","SARS-CoV-2","GCGACGCTCGAGCGGA",1,34.47,9.43,-1.4,0.14,2.03,1.05,0.01,"1 nonsynonymous","Y66G",1
"lib2","SARS-CoV-2","GCGACGCTCGCTTGTG",8,20.36,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","V103D",1
"lib2","SARS-CoV-2","GCGACGGGACACGAGG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","T63S V77* K87S W106L",4
"lib2","SARS-CoV-2","GCGACGGTCATTATCC",4,17.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A22T V52A N120F K132Y",4
"lib2","SARS-CoV-2","GCGACGGTCCCATTCC",8,149.04,10.82,-0.01,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGACGTATATCAAAT",1,0.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCGACTAAACAACTCA",6,113.21,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y39S F62D A105I P149L N171A",5
"lib2","SARS-CoV-2","GCGACTAAAGTCACAC",2,7.7,7.05,-3.78,0.22,2.09,1.01,0.01,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","GCGACTAAATGGTACC",3,19.33,9.66,-1.17,0.19,1.66,1.08,0.01,"1 nonsynonymous","W23N",1
"lib2","SARS-CoV-2","GCGACTAACGAGAACG",2,20.08,8.43,-2.4,0.23,1.78,1,0.03,"1 nonsynonymous","Y165D",1
"lib2","SARS-CoV-2","GCGACTAACTCCATTA",1,31.72,8.02,-2.82,0.41,1.5,1,0.07,">1 nonsynonymous","R25F L60S I142T",3
"lib2","SARS-CoV-2","GCGACTACAGAGAACT",3,66.34,10.34,-0.49,0.06,2.88,1.06,0,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","GCGACTACCGACTTAC",12,89.43,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","GCGACTACCGGAAACC",8,120.84,10.91,0.07,0.06,2.98,1.04,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","GCGACTAGACTGGCAC",3,15.07,6.13,-4.7,0.6,3,1.15,0.01,">1 nonsynonymous","T3Y G83V D97P Q176P",4
"lib2","SARS-CoV-2","GCGACTAGAGGGGCAT",7,94.39,9.7,-1.13,0.09,2,1.06,0,">1 nonsynonymous","F47S I138S",2
"lib2","SARS-CoV-2","GCGACTATACCGTAAT",8,94.7,8.78,-2.06,0.1,1.85,1.1,0,">1 nonsynonymous","D98A Y121S V194I K198V",4
"lib2","SARS-CoV-2","GCGACTATCGGATTTT",1,26.51,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T3Y G83H A105C R124T G166S S200Q",6
"lib2","SARS-CoV-2","GCGACTATTCGACAAA",5,28.37,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","V181N",1
"lib2","SARS-CoV-2","GCGACTCTAAGCAGTA",3,20.47,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G9R G86Y K94C C150M P161F",5
"lib2","SARS-CoV-2","GCGACTCTAGTCATCT",17,118.16,10.7,-0.14,0.03,2.87,1.12,0,">1 nonsynonymous","I138Y F160Y",2
"lib2","SARS-CoV-2","GCGACTGACAGAGGTC",2,1.76,NA,NA,NA,NA,NA,NA,"stop","K48* P96G Q176* G196M",4
"lib2","SARS-CoV-2","GCGACTGAGGGAAGAC",1,0.81,NA,NA,NA,NA,NA,NA,"stop","Y66I A89*",2
"lib2","SARS-CoV-2","GCGACTGGGAAACACG",11,339.09,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7L V180R",2
"lib2","SARS-CoV-2","GCGACTGGGCTCAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K Q84F F156I",3
"lib2","SARS-CoV-2","GCGACTGTATGAATAG",8,135.21,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S36V I88Q T148P Y175M",4
"lib2","SARS-CoV-2","GCGACTTATTTACTTC",6,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D F17L Q144S C150P V181L",5
"lib2","SARS-CoV-2","GCGACTTGAAAACTAA",1,11.79,9.29,-1.55,0.17,1.88,1.04,0.01,">1 nonsynonymous","D90S S139W",2
"lib2","SARS-CoV-2","GCGACTTTTGAAGCAA",3,42,9.69,-1.15,0.11,2.27,1.05,0.01,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","GCGAGAAACATAAATA",3,53.02,10.79,-0.04,0.05,3,1,0,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","GCGAGAAACCACAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71E T100G",2
"lib2","SARS-CoV-2","GCGAGAAATTGAAGTT",1,5.75,7.36,-3.47,1.11,1.5,1.23,0.05,">1 nonsynonymous","N13S T55L T63N K114V G146R",5
"lib2","SARS-CoV-2","GCGAGAAGTTAGTTTT",10,95.17,10.8,-0.03,0.05,2.9,1.11,0,">1 nonsynonymous","T55D P149F",2
"lib2","SARS-CoV-2","GCGAGAATTATGCTAA",5,27.26,8.19,-2.64,0.37,1.5,1.08,0.07,">1 nonsynonymous","A89L N151H",2
"lib2","SARS-CoV-2","GCGAGACGTTGTGGGC",5,10.9,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","P7S T63L D68K D98Y",4
"lib2","SARS-CoV-2","GCGAGAGAATAAAACG",1,78,8.46,-2.37,0.07,2.79,1.07,0,">1 nonsynonymous","V153E Y175C H189Y",3
"lib2","SARS-CoV-2","GCGAGAGCAAAAACGC",2,15.17,10.92,0.08,0.08,2.92,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGAGAGGTCGGCAAA",2,15.31,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","R25S G101D",2
"lib2","SARS-CoV-2","GCGAGATAACTATCTT",2,11.92,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V32S C49P L60Y W106R V173F",5
"lib2","SARS-CoV-2","GCGAGATGAACGTAAA",9,129.74,10.09,-0.74,0.04,2.98,1.04,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","GCGAGATTAACACAAA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S L95T Y121L",3
"lib2","SARS-CoV-2","GCGAGATTAGCGAGAC",4,32.2,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F12N P161F",2
"lib2","SARS-CoV-2","GCGAGATTCAAAGCAA",7,35.91,9.17,-1.66,0.11,2.16,1.12,0,">1 nonsynonymous","T15A N107P G155T",3
"lib2","SARS-CoV-2","GCGAGCAATACTAATA",3,9.32,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","C6L G83S S139P",3
"lib2","SARS-CoV-2","GCGAGCAATATATAAG",13,163.19,10.52,-0.32,0.03,2.94,1.05,0,">1 nonsynonymous","F44R K56E",2
"lib2","SARS-CoV-2","GCGAGCAATGTTTGAT",8,40.28,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6Y A89M S139G",3
"lib2","SARS-CoV-2","GCGAGCATAACAGACT",2,31.8,10.06,-0.77,0.14,2.6,1.25,0.01,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","GCGAGCTCAATTCTGC",1,12.91,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V103L N118D",2
"lib2","SARS-CoV-2","GCGAGCTGTCATACTT",2,38.49,10.72,-0.12,0.05,3,1,0,"1 nonsynonymous","L57M",1
"lib2","SARS-CoV-2","GCGAGGAAAATTAAGT",2,31.58,10.54,-0.3,0.07,2.91,1.08,0,">1 nonsynonymous","G9A V37R F44I",3
"lib2","SARS-CoV-2","GCGAGGAATTTGATAT",1,50.09,10.2,-0.64,0.06,2.85,1.08,0,">1 nonsynonymous","A18M N30E P197T",3
"lib2","SARS-CoV-2","GCGAGGATGTTTTCAG",12,166.3,10.46,-0.38,0.04,2.91,1.1,0,"1 nonsynonymous","G155M",1
"lib2","SARS-CoV-2","GCGAGGCACTGACAAT",11,263.67,10.39,-0.44,0.02,2.93,1.06,0,">1 nonsynonymous","L122E S164L",2
"lib2","SARS-CoV-2","GCGAGGGTCAGACTAC",2,64.54,10.7,-0.14,0.06,2.92,1.09,0,"1 nonsynonymous","S184R",1
"lib2","SARS-CoV-2","GCGAGGGTGAAATGTA",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D F99I S200V",3
"lib2","SARS-CoV-2","GCGAGGTACCTGGACA",1,8.65,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","C150Y N157S Y175P",3
"lib2","SARS-CoV-2","GCGAGGTTAATTATGT",5,57.08,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P82V L95R V173T",3
"lib2","SARS-CoV-2","GCGAGTAAAAGTGACA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","V115* Y175L",2
"lib2","SARS-CoV-2","GCGAGTAAGGCCGTGA",1,13.04,9.62,-1.22,0.08,2.84,1.07,0,">1 nonsynonymous","T55C N64K N120W",3
"lib2","SARS-CoV-2","GCGAGTACTGCATATA",2,34.09,9.37,-1.46,0.11,2.07,1.07,0,">1 nonsynonymous","N64I S69T Q144L P197T",4
"lib2","SARS-CoV-2","GCGAGTAGAAAGGAAA",3,27.71,10.98,0.14,0.05,2.99,1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGAGTCATCGAGAAA",3,7.78,6,-4.84,2,3,1,0,">1 nonsynonymous","A33C K56F E141V G146V",4
"lib2","SARS-CoV-2","GCGAGTCATGCAACGT",7,56.01,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9Q F44S V52S K94W S139N",5
"lib2","SARS-CoV-2","GCGAGTCTATTTGATA",6,20.09,6,-4.84,1.29,3,1.16,0.01,">1 nonsynonymous","Y35N Q84L S113V",3
"lib2","SARS-CoV-2","GCGAGTGAATTATGCA",2,39.3,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5M S19N F70G Y119H C150I",5
"lib2","SARS-CoV-2","GCGAGTGATGAACCTA",4,59.86,10.61,-0.23,0.06,2.86,1.08,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","GCGAGTGCTTTAACCT",11,84.45,6.23,-4.61,0.74,1.5,1.21,0.02,">1 nonsynonymous","L57Y R124S",2
"lib2","SARS-CoV-2","GCGAGTTAGCAGACCA",18,208.97,10.75,-0.09,0.05,2.93,1.09,0,">1 nonsynonymous","Y35F D98G S129V",3
"lib2","SARS-CoV-2","GCGAGTTCCCCGTCCG",2,0.26,NA,NA,NA,NA,NA,NA,"stop","N4V S41H D97* N118Y F160S",5
"lib2","SARS-CoV-2","GCGAGTTTTTAGCTCG",1,21.42,9.01,-1.82,0.09,2.57,1.03,0,">1 nonsynonymous","A22V Q168L",2
"lib2","SARS-CoV-2","GCGATAAACCATCTAT",4,54.98,8.22,-2.62,0.14,2.12,1.11,0.01,">1 nonsynonymous","Y39V V71L G174I",3
"lib2","SARS-CoV-2","GCGATAAATCCGAAAG",12,329.51,8.27,-2.57,0.1,1.89,1.06,0,">1 nonsynonymous","I2S K114S Y119T V181A",4
"lib2","SARS-CoV-2","GCGATAAATTCGCGGG",6,155.23,9.76,-1.07,0.07,2.4,1.05,0,">1 nonsynonymous","L5Y V11C",2
"lib2","SARS-CoV-2","GCGATAAGGAGGAGAT",11,122.95,9.31,-1.53,0.06,2.59,1.07,0,">1 nonsynonymous","C6L R78K G174P",3
"lib2","SARS-CoV-2","GCGATAAGTGTCTCTT",17,110.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48N L131R",2
"lib2","SARS-CoV-2","GCGATAATCCGAAATC",1,54.62,8.48,-2.35,0.19,2.58,1.1,0.01,"1 nonsynonymous","Y175A",1
"lib2","SARS-CoV-2","GCGATAATGCTACACA",15,7.72,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","GCGATAATGTAATAAA",7,35.18,10.72,-0.11,0.1,2.88,1.05,0.01,">1 nonsynonymous","P7C Y35M",2
"lib2","SARS-CoV-2","GCGATAATTTATTAAA",19,58.96,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","T15N R25M N110P",3
"lib2","SARS-CoV-2","GCGATACATGCCAATG",2,21.3,9.63,-1.2,0.17,2.3,1.2,0.02,">1 nonsynonymous","I2G N30T S45K",3
"lib2","SARS-CoV-2","GCGATACATTTGATTG",12,78.01,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S45P G101N Y175M",3
"lib2","SARS-CoV-2","GCGATACCTTCGGGTG",2,18.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9Y L95Y A145T",3
"lib2","SARS-CoV-2","GCGATAGATTACAAAT",3,32.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N64A F99G K128V",3
"lib2","SARS-CoV-2","GCGATAGCACATTATC",6,45.81,6.27,-4.57,0.38,1.5,1.13,0.01,">1 nonsynonymous","T63Y L95A S129C R136K",4
"lib2","SARS-CoV-2","GCGATAGCGTAGGCAA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","S36V W106* Y143L",3
"lib2","SARS-CoV-2","GCGATAGTAGCGTAAA",5,56.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V N118L G155Y",3
"lib2","SARS-CoV-2","GCGATATCAAACCATG",7,112.1,10.17,-0.66,0.07,2.67,1.04,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","GCGATATCTCGACGTT",2,14.08,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K87D T100P I104F R136T P149L",5
"lib2","SARS-CoV-2","GCGATCATCCGCATCA",1,39.29,10.25,-0.59,0.07,2.73,1.03,0,">1 nonsynonymous","T15S T63S S129F N151I",4
"lib2","SARS-CoV-2","GCGATCCAAGTTCCTG",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Y G196R T201A",3
"lib2","SARS-CoV-2","GCGATCCATCCGTCAA",8,177.67,10.44,-0.4,0.05,2.9,1.08,0,">1 nonsynonymous","I2V Y39A K199L",3
"lib2","SARS-CoV-2","GCGATCGACGACGGCC",2,38.83,8.28,-2.56,0.16,2.32,1.07,0.01,">1 nonsynonymous","T15I G146R F156W Q168F",4
"lib2","SARS-CoV-2","GCGATCGATGAAATTA",5,19.89,6,-4.84,2,1.5,1.37,0.02,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","GCGATCTAATATGTCT",3,0.85,NA,NA,NA,NA,NA,NA,"stop","P96A F160R P177N T201*",4
"lib2","SARS-CoV-2","GCGATCTCTAAAAGAG",2,50.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V52F S69I R127H",3
"lib2","SARS-CoV-2","GCGATCTTCCGTCCAT",2,16.79,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N40K F99L S139N C150M",4
"lib2","SARS-CoV-2","GCGATGAAGGTGGAAC",2,49.63,10.81,-0.03,0.08,2.89,1.12,0,"1 nonsynonymous","T3I",1
"lib2","SARS-CoV-2","GCGATGAATTAGAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","S113A G166*",2
"lib2","SARS-CoV-2","GCGATGAGAGCCCTAA",8,53.25,6,-4.84,1.68,1.5,1.13,0.01,">1 nonsynonymous","D137M P161G",2
"lib2","SARS-CoV-2","GCGATGCAAGTATTGA",10,3792.62,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N24A P54T K94T K128L",4
"lib2","SARS-CoV-2","GCGATGCACTTTGTGT",4,52.13,10.82,-0.02,0.05,2.93,1.09,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GCGATGCATTTAACAT",3,28.19,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","D59L D90Y W106Q R124L",4
"lib2","SARS-CoV-2","GCGATGCCAACTCAAA",2,106.92,10.65,-0.19,0.02,2.98,1.02,0,">1 nonsynonymous","N4M N120M",2
"lib2","SARS-CoV-2","GCGATGCCCTTATACT",6,139.67,10.79,-0.04,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGATGGGACTAGACC",3,12.55,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","S41W A67D T100L S113L L131G T201C",6
"lib2","SARS-CoV-2","GCGATGGGTATTGTCT",3,18.34,10.83,-0.01,0.07,2.79,1.2,0,">1 nonsynonymous","S129Y S200L",2
"lib2","SARS-CoV-2","GCGATGTTATAGTCTG",2,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1G Y93L C102P",3
"lib2","SARS-CoV-2","GCGATTAAAACACTAA",2,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y S147L",2
"lib2","SARS-CoV-2","GCGATTAAACCTCATG",5,60.79,8.45,-2.39,0.19,1.95,1.1,0.01,">1 nonsynonymous","A105T T148V Q176A",3
"lib2","SARS-CoV-2","GCGATTAATTAAAAAA",1,21.74,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","C31L S41P P82E",3
"lib2","SARS-CoV-2","GCGATTACAACAACCT",8,1.32,NA,NA,NA,NA,NA,NA,"stop","Y91* R124C F134Q T201S",4
"lib2","SARS-CoV-2","GCGATTACCCTTTGGT",5,68.93,10.42,-0.41,0.04,2.89,1.05,0,">1 nonsynonymous","N4L P149L",2
"lib2","SARS-CoV-2","GCGATTACTTATATAA",4,23.18,8.58,-2.26,0.17,1.67,1.15,0.02,">1 nonsynonymous","V65N Q84S S139N",3
"lib2","SARS-CoV-2","GCGATTCCTTAGACTT",1,56.52,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y39W Y50L G83L V173T",4
"lib2","SARS-CoV-2","GCGATTCTATAATATG",4,52.27,10.47,-0.37,0.05,2.9,1.08,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","GCGATTCTATCGAGAC",6,173.83,10.79,-0.05,0.03,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGATTGAAAGAATAT",2,15.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G86L G155V",2
"lib2","SARS-CoV-2","GCGATTGATAATGCAT",2,8.78,6.79,-4.05,0.43,2.38,1.24,0.01,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","GCGATTGCTAACCAGA",9,125.12,6,-4.84,2,3,1.16,0,"1 nonsynonymous","Y159S",1
"lib2","SARS-CoV-2","GCGATTGCTAATGGTA",1,0.06,NA,NA,NA,NA,NA,NA,"stop","I28* T148V",2
"lib2","SARS-CoV-2","GCGATTGGTTGAGACG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","F17M V115*",2
"lib2","SARS-CoV-2","GCGATTTCAAGCAACG",4,2.19,NA,NA,NA,NA,NA,NA,"stop","V71L N107Y F126L E135* S139T P149S G172I",7
"lib2","SARS-CoV-2","GCGCAAAAAGATTGTA",15,62.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E76Q V180R",2
"lib2","SARS-CoV-2","GCGCAAAACAAAATTA",3,0.76,NA,NA,NA,NA,NA,NA,"stop","S43T Y50K C158*",3
"lib2","SARS-CoV-2","GCGCAAAGACAGTGAA",4,238.56,10.84,0.01,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCAAAGACTCTTAG",8,42.02,7.01,-3.82,0.36,1.5,1.09,0.03,">1 nonsynonymous","I2L V103K",2
"lib2","SARS-CoV-2","GCGCAAAGGGTATCAG",7,6.23,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","E10C D34M D97R",3
"lib2","SARS-CoV-2","GCGCAAAGTCAATAAA",16,101.49,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K94P C150W K198A",3
"lib2","SARS-CoV-2","GCGCAAAGTTGCGCTC",3,67.13,8.15,-2.69,0.45,1.5,1,0.08,">1 nonsynonymous","P177L L183A T201P",3
"lib2","SARS-CoV-2","GCGCAAATGCAAAGAA",5,7.18,8,-2.83,0.38,1.5,1,0.07,">1 nonsynonymous","T15C P54Y A81G N110Y I142Y",5
"lib2","SARS-CoV-2","GCGCAACACTCAGCAA",2,51.83,9.08,-1.76,0.36,1.5,1,0.07,">1 nonsynonymous","F134S V181R",2
"lib2","SARS-CoV-2","GCGCAACATCCTCAAA",1,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K P149K C158F S164F",4
"lib2","SARS-CoV-2","GCGCAACATTCCATCT",2,0.61,NA,NA,NA,NA,NA,NA,"stop","R73P P96*",2
"lib2","SARS-CoV-2","GCGCAACTACCCACCC",6,56.27,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y119C F167V",2
"lib2","SARS-CoV-2","GCGCAACTCAAATGAG",1,28.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D34I F44Q D112T Y178A",4
"lib2","SARS-CoV-2","GCGCAAGAACTCAAAT",3,14.49,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T85I L95V G101H T140S P149Y",5
"lib2","SARS-CoV-2","GCGCAATCACAAACAG",2,103.91,10.8,-0.03,0.05,2.91,1.1,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","GCGCAATCTATCAGAA",1,24.62,7.61,-3.22,0.41,1.5,1,0.05,"1 nonsynonymous","V182L",1
"lib2","SARS-CoV-2","GCGCAATGCAACATCG",4,48.79,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A18T N64R V103M",3
"lib2","SARS-CoV-2","GCGCACAAACACCTTC",1,10.45,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","P7I A18V Y21E K56I F70I N157K",6
"lib2","SARS-CoV-2","GCGCACAAAGGGTAGC",1,8.4,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T15C D68M P82L",3
"lib2","SARS-CoV-2","GCGCACAATACCCAAT",7,1.95,NA,NA,NA,NA,NA,NA,"stop","A18S F44L D98L L162*",4
"lib2","SARS-CoV-2","GCGCACAATAGGGCGG",8,140.6,10.83,-0.01,0.06,2.89,1.12,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","GCGCACACTCTACCGT",1,16.28,10.79,-0.04,0.08,2.93,1.04,0,">1 nonsynonymous","A18T P197S",2
"lib2","SARS-CoV-2","GCGCACATTGATTAAA",7,75.08,8.61,-2.23,0.05,2.63,1.07,0,">1 nonsynonymous","Y35E N118S",2
"lib2","SARS-CoV-2","GCGCACCACCGAAATT",3,21.01,6,-4.84,2,3,1.27,0.01,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","GCGCACCAGAGAAAAG",2,117.7,10.77,-0.07,0.05,2.98,1.05,0,">1 nonsynonymous","T55L V153S",2
"lib2","SARS-CoV-2","GCGCACCAGGATTCCG",9,77.57,9.41,-1.43,0.08,2.25,1.08,0,">1 nonsynonymous","C61R G155S Y165F",3
"lib2","SARS-CoV-2","GCGCACCCGTTGTACA",1,26.78,8.07,-2.77,0.17,2.03,1.13,0.01,">1 nonsynonymous","S41V F47E S53D L125P T140Q",5
"lib2","SARS-CoV-2","GCGCACCGAGAGCGGA",1,35.26,9.3,-1.53,0.18,1.5,1.21,0.02,"1 nonsynonymous","C49A",1
"lib2","SARS-CoV-2","GCGCACGAAGACCTAC",1,10.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L95S N107M N151L K199I",4
"lib2","SARS-CoV-2","GCGCACGACGGGAAAG",1,7.33,9.67,-1.17,0.2,2.43,1,0.01,">1 nonsynonymous","P96H K114R",2
"lib2","SARS-CoV-2","GCGCACGATGCTGCTA",2,32.56,10.5,-0.33,0.06,2.94,1.09,0,">1 nonsynonymous","Y39T G174R",2
"lib2","SARS-CoV-2","GCGCACTAACATCCAA",7,8.47,10.75,-0.09,0.06,2.96,1.07,0,"1 nonsynonymous","A190F",1
"lib2","SARS-CoV-2","GCGCACTAACTAAAGC",1,62,10.11,-0.73,0.07,2.67,1.13,0,">1 nonsynonymous","A14R A81G F160S",3
"lib2","SARS-CoV-2","GCGCACTAGAGCAGTA",1,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P N13S R16K V52F A105L",5
"lib2","SARS-CoV-2","GCGCACTCACTAAATA",8,162.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D59A P177W",2
"lib2","SARS-CoV-2","GCGCACTGCTTCTCAC",3,0.84,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","GCGCACTTACTAAAAG",10,167.54,10,-0.84,0.08,2.26,1.03,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","GCGCACTTATAAATCT",2,4.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","GCGCAGACTATATCAA",5,49.86,10.68,-0.15,0.05,2.91,1.08,0,">1 nonsynonymous","A42K K87Y T100S",3
"lib2","SARS-CoV-2","GCGCAGAGAAGGAGTG",6,58.95,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P7E T55F A81N I142T C150N",5
"lib2","SARS-CoV-2","GCGCAGATGCTAATTA",5,65.29,10.68,-0.15,0.06,2.89,1.04,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","GCGCAGCAACACGACA",2,0,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","GCGCAGCTTTGCTAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A22D D59W N118C Y143* V181H",5
"lib2","SARS-CoV-2","GCGCAGGCGAAAAAGC",18,309.79,10.11,-0.73,0.05,2.66,1.05,0,">1 nonsynonymous","K48L S139M",2
"lib2","SARS-CoV-2","GCGCATAAAACGATAA",5,94.76,10.21,-0.62,0.05,2.81,1.16,0,">1 nonsynonymous","C61F K94R",2
"lib2","SARS-CoV-2","GCGCATAACTTTTAAA",2,48.85,10.21,-0.63,0.06,2.81,1.06,0,">1 nonsynonymous","F44V K128V",2
"lib2","SARS-CoV-2","GCGCATACCCGATGCA",6,102.23,10.84,0,0.06,2.92,1.1,0,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","GCGCATACTAAACCTA",3,14.33,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V37E P54R N92R P149Q V153D",5
"lib2","SARS-CoV-2","GCGCATATCACATTTT",8,110.89,10.73,-0.1,0.05,2.91,1.09,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","GCGCATATTTAACTAA",2,53.35,10.86,0.02,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCATCAATAACAAT",5,120.46,10.87,0.04,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCATCACGTTACTT",5,28.93,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","C49R N120W",2
"lib2","SARS-CoV-2","GCGCATCACTGTAAAT",4,56.21,10.8,-0.03,0.06,2.95,1.08,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","GCGCATCATTCAAGAT",1,11.07,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P7L A33T I104G",3
"lib2","SARS-CoV-2","GCGCATCATTGATAAG",5,49.44,6.28,-4.56,0.75,1.5,1.2,0.03,"1 nonsynonymous","F99E",1
"lib2","SARS-CoV-2","GCGCATCCATCCATTA",3,128.14,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S43F G83D P177V K198A",4
"lib2","SARS-CoV-2","GCGCATCCCTAACACA",4,51.46,9.71,-1.13,0.1,2.26,1.03,0,">1 nonsynonymous","C6L N13Y",2
"lib2","SARS-CoV-2","GCGCATCTATTTTTAT",1,13.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S C61S T100W",3
"lib2","SARS-CoV-2","GCGCATCTCAAGATGC",9,66.09,9.45,-1.39,0.11,1.83,1.13,0.01,">1 nonsynonymous","N13C F47L G146S",3
"lib2","SARS-CoV-2","GCGCATGAGAAATGCT",9,124.46,10.89,0.05,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCATGGAAACTGGT",1,61.32,10.75,-0.09,0.05,2.96,1.04,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GCGCATGGAGACGAGA",11,193.83,10.88,0.05,0.05,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGCATTATACAGAAC",3,47.44,10.75,-0.09,0.03,2.94,1.07,0,">1 nonsynonymous","P7M V37A",2
"lib2","SARS-CoV-2","GCGCATTATTCCACTA",4,33.28,10.8,-0.04,0.08,2.76,1.18,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","GCGCATTCACGTACCA",1,8.25,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","N40Y F99S G155L V173I",4
"lib2","SARS-CoV-2","GCGCATTGAGAAAAAG",3,31.82,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","GCGCATTTATCCACGG",2,44.1,9.73,-1.11,0.08,2.87,1.07,0,">1 nonsynonymous","A22G Y123R K128T E141D",4
"lib2","SARS-CoV-2","GCGCATTTCAGAGTAG",6,117.71,10.21,-0.62,0.02,2.95,1.06,0,">1 nonsynonymous","V37S E154I",2
"lib2","SARS-CoV-2","GCGCATTTTATGCCAA",3,6.01,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S41F S45Y D98M V181A",4
"lib2","SARS-CoV-2","GCGCATTTTTTGAATC",3,23.76,10.54,-0.3,0.09,3,1,0,">1 nonsynonymous","F44C T85V L122K",3
"lib2","SARS-CoV-2","GCGCCAAACAGGGTAT",2,38.13,6.02,-4.81,1.26,1.5,1.17,0.03,">1 nonsynonymous","R25L T201Y",2
"lib2","SARS-CoV-2","GCGCCAAGCATACTTC",1,50.45,10.76,-0.08,0.04,2.91,1.11,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","GCGCCAATGCACCATG",8,1.69,NA,NA,NA,NA,NA,NA,"stop","W23K L95T K114* I138S",4
"lib2","SARS-CoV-2","GCGCCACACTATTGGC",2,5.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G E141Y",2
"lib2","SARS-CoV-2","GCGCCACACTCTTAAA",2,6.15,6,-4.84,2,3,1.04,0,">1 nonsynonymous","G101Y F126L",2
"lib2","SARS-CoV-2","GCGCCACAGCACATTG",4,17.68,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S36R K48E Y93V",3
"lib2","SARS-CoV-2","GCGCCACATAAAGTGG",2,6.67,9.04,-1.8,0.19,1.72,1.29,0.04,">1 nonsynonymous","S19D T46N D97V T140N V153K",5
"lib2","SARS-CoV-2","GCGCCACATATATTGA",8,0.85,NA,NA,NA,NA,NA,NA,"stop","K56P N110D L122* I138K",4
"lib2","SARS-CoV-2","GCGCCACCAATATAAT",5,179.36,10.19,-0.65,0.04,2.79,1.06,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","GCGCCAGACTTGATCA",3,15.01,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","GCGCCAGTTAAGTCTA",8,59.14,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D137T G172Y",2
"lib2","SARS-CoV-2","GCGCCATAAACGAGGT",3,24.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28N T100D C158Y",3
"lib2","SARS-CoV-2","GCGCCATGCTCAAAAC",6,88.41,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G9Q K26I K87V W106F F167D",5
"lib2","SARS-CoV-2","GCGCCATTAGAAGAAC",2,46.49,10.83,0,0.05,3,1.02,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","GCGCCATTATCCGCAT",2,46.85,10.85,0.01,0.07,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGCCCAAATGTGAAC",5,12.76,NA,NA,NA,NA,NA,NA,"stop","Y35* I88M",2
"lib2","SARS-CoV-2","GCGCCCAACCCTCAAG",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y V103L",2
"lib2","SARS-CoV-2","GCGCCCAATATAAATC",2,0.29,NA,NA,NA,NA,NA,NA,"stop","A33* R127Q",2
"lib2","SARS-CoV-2","GCGCCCACTACTGACA",1,22.88,10.49,-0.35,0.07,2.9,1.07,0,">1 nonsynonymous","N4F A192R",2
"lib2","SARS-CoV-2","GCGCCCATAAATTGAG",1,35.03,10.26,-0.58,0.08,2.73,1.01,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","GCGCCCCAAGCTGGTA",10,12.74,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C6D K87F C150F T170M",4
"lib2","SARS-CoV-2","GCGCCCCAATCCGCGT",4,14.95,9.59,-1.24,0.22,1.5,1.02,0.03,"1 nonsynonymous","P96F",1
"lib2","SARS-CoV-2","GCGCCCCCTAAATGAG",1,7.17,6.2,-4.64,0.38,2.6,1.06,0.01,">1 nonsynonymous","N4L C158R",2
"lib2","SARS-CoV-2","GCGCCCCTCTCTCGAA",14,179.56,10.82,-0.02,0.04,2.93,1.08,0,">1 nonsynonymous","N110E N130C",2
"lib2","SARS-CoV-2","GCGCCCTCGATGGCCT",1,16.59,9.97,-0.86,0.19,2.49,1.07,0.02,">1 nonsynonymous","Q84Y N110M S184G",3
"lib2","SARS-CoV-2","GCGCCGACCCCTACAA",2,46.47,10.84,0,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCCGCACCGGTTAC",5,82.5,10.19,-0.64,0.09,2.74,1.06,0,">1 nonsynonymous","K132M Y178Q",2
"lib2","SARS-CoV-2","GCGCCGCTAACGTTTA",9,111.68,10.79,-0.05,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCCGTTAAGCATTT",10,147.97,10.61,-0.23,0.03,2.92,1.07,0,">1 nonsynonymous","L5E N120G K132I S139T",4
"lib2","SARS-CoV-2","GCGCCTAAACATGTAC",7,84.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49L E141C S147P G172S",4
"lib2","SARS-CoV-2","GCGCCTATAAAATTAA",13,217.2,10.83,0,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGCCTATGTCATAAT",1,8.4,6,-4.84,2,2.97,1.02,0,">1 nonsynonymous","T55S V77S G146E G152V K199D",5
"lib2","SARS-CoV-2","GCGCCTCTGATAAAGC",2,29.43,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V11P A42Y S53V D97C Y165K",5
"lib2","SARS-CoV-2","GCGCCTGAGGTCTTTT",3,84.17,10.94,0.11,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCCTTAACTGGAAT",15,50.93,8.9,-1.94,0.25,1.5,1.15,0.03,">1 nonsynonymous","K94Y P191F",2
"lib2","SARS-CoV-2","GCGCCTTACAATCCCT",3,25.5,9.2,-1.63,0.32,1.5,1,0.04,">1 nonsynonymous","S19M D59I",2
"lib2","SARS-CoV-2","GCGCCTTTGCACCACG",2,10.03,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N4K G101S G116L N151K",4
"lib2","SARS-CoV-2","GCGCCTTTGCGCAAAC",1,14.89,6,-4.84,2,3,1.03,0,">1 nonsynonymous","D97F S139Y L162Q",3
"lib2","SARS-CoV-2","GCGCGAAATACATATT",5,22.63,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","S19L D34Y L60A N92V S129P I138Y P149V Q176V",8
"lib2","SARS-CoV-2","GCGCGAAATTCCAGAA",10,149.52,10.83,-0.01,0.03,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCGACTACACCGAG",2,83.44,10.26,-0.58,0.06,2.88,1.06,0,">1 nonsynonymous","I138C I142M P149V T201S",4
"lib2","SARS-CoV-2","GCGCGACTAGCCGAAT",10,68.39,7.88,-2.96,0.29,1.5,1.01,0.03,">1 nonsynonymous","N1T R127E",2
"lib2","SARS-CoV-2","GCGCGACTTACAATTA",3,12.23,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2S S45R G51E N118T N151R S184L",6
"lib2","SARS-CoV-2","GCGCGAGAAACAAACA",6,119.36,6,-4.84,0.71,1.5,1.18,0.01,">1 nonsynonymous","C150H A190V P191T",3
"lib2","SARS-CoV-2","GCGCGAGAATGATTAA",14,117.89,6,-4.84,1.66,1.5,1.22,0.01,">1 nonsynonymous","Y50C T170L",2
"lib2","SARS-CoV-2","GCGCGAGATAGATGTC",1,31.1,10.07,-0.76,0.15,2.17,1,0.01,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","GCGCGAGGGCGTATAA",7,19.24,6,-4.84,2,3,1.2,0,">1 nonsynonymous","I104R G152K",2
"lib2","SARS-CoV-2","GCGCGATAAGAATAAT",14,87.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55C D68L N157G",3
"lib2","SARS-CoV-2","GCGCGATATATGTCAC",2,96.07,8.43,-2.41,0.08,2.63,1.05,0,">1 nonsynonymous","D97G N157L",2
"lib2","SARS-CoV-2","GCGCGATGATACAATG",5,41.58,10.69,-0.15,0.07,2.81,1.16,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GCGCGCAAATTATAAA",2,23.5,9.73,-1.11,0.08,2.17,1.12,0,">1 nonsynonymous","I2E S41T F44S T85P",4
"lib2","SARS-CoV-2","GCGCGCACCATATGCC",2,0.74,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCGCGCCGAAGTGATA",3,27.01,6,-4.84,1.92,1.5,1.09,0.01,">1 nonsynonymous","K87L Y91S V103C",3
"lib2","SARS-CoV-2","GCGCGCTAACTGTTCG",2,41.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W106L D112V Q176H",3
"lib2","SARS-CoV-2","GCGCGCTCCGGCCAGT",3,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N T85R F99I W106A F185D",5
"lib2","SARS-CoV-2","GCGCGCTTATTCACAC",4,60.47,9.91,-0.92,0.09,2.38,1.08,0,">1 nonsynonymous","S19A N24A L60T",3
"lib2","SARS-CoV-2","GCGCGCTTCCACTCTC",12,61.43,9.87,-0.96,0.08,2.09,1.08,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","GCGCGCTTGATCAGGA",7,85,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D90P K128Q",2
"lib2","SARS-CoV-2","GCGCGGAAAATAGGCG",2,1.27,NA,NA,NA,NA,NA,NA,"stop","V103* T170E V182Q",3
"lib2","SARS-CoV-2","GCGCGGATAAACCCAA",15,142.67,9.59,-1.25,0.06,1.77,1.07,0,">1 nonsynonymous","V37L L60W W106R",3
"lib2","SARS-CoV-2","GCGCGGTTTAACAAAC",9,83.73,10.85,0.01,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCGTACAGTTATTG",5,47.37,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4L A81D T85W D112K Y143G L162F",6
"lib2","SARS-CoV-2","GCGCGTATTCCGAAGT",1,44,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","D98T N118Q P149S P169H Q176V T201K",6
"lib2","SARS-CoV-2","GCGCGTGATTGGTAAA",16,9.49,NA,NA,NA,NA,NA,NA,"stop","G86* L122M",2
"lib2","SARS-CoV-2","GCGCGTGCATCAAGGT",6,22.6,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E10H A22T F99K",3
"lib2","SARS-CoV-2","GCGCGTTAGAAATTAC",1,26,9.63,-1.21,0.14,1.89,1.06,0.01,">1 nonsynonymous","F62L W106C",2
"lib2","SARS-CoV-2","GCGCGTTTCCAAGACT",3,81.15,10.9,0.07,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCGTTTCCTAGAAG",8,1.7,NA,NA,NA,NA,NA,NA,"stop","S113* E141N",2
"lib2","SARS-CoV-2","GCGCTAAGATTTCTAA",3,349.95,9.14,-1.7,0.04,2.96,1.04,0,">1 nonsynonymous","N30G Y119M",2
"lib2","SARS-CoV-2","GCGCTAATCTGCAAGC",11,82.1,6,-4.84,1.63,1.5,1.13,0.01,">1 nonsynonymous","V11P T55W F62A S69L T85K D98A",6
"lib2","SARS-CoV-2","GCGCTACTACACCTGA",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S V103A F160R G166D",4
"lib2","SARS-CoV-2","GCGCTACTGTACGGCC",21,107,8.99,-1.85,0.11,1.73,1.13,0.01,">1 nonsynonymous","G9A L57K D90W",3
"lib2","SARS-CoV-2","GCGCTACTTGTACCAA",2,26.75,9.22,-1.62,0.25,1.5,1.02,0.02,">1 nonsynonymous","G9R I28S D98T Y123V L188G",5
"lib2","SARS-CoV-2","GCGCTAGGAACTACGC",18,234.35,10.81,-0.02,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGCTATGATGTTACA",7,143.42,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I2Y R16K R27Y T63M K87Q K132N P177T",7
"lib2","SARS-CoV-2","GCGCTATGTGGTACAA",1,24.46,9.04,-1.79,0.15,2.65,1.07,0.06,">1 nonsynonymous","A33T T63H G117T",3
"lib2","SARS-CoV-2","GCGCTATTAAACATTC",1,0.46,NA,NA,NA,NA,NA,NA,"stop","F44* T55F Q176Y",3
"lib2","SARS-CoV-2","GCGCTATTGTTTAACA",2,29.17,10.78,-0.06,0.03,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGCTATTTAATAATT",2,1.03,NA,NA,NA,NA,NA,NA,"stop","V37I L188*",2
"lib2","SARS-CoV-2","GCGCTCAACATATAAT",5,53.19,6.98,-3.86,0.42,1.5,1.15,0.03,">1 nonsynonymous","W23L I138H F156L",3
"lib2","SARS-CoV-2","GCGCTCAAGAGTATTA",4,27.85,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32K G51L A89G K114E",4
"lib2","SARS-CoV-2","GCGCTCAATTCTCGAA",3,14.93,6,-4.84,2,1.5,1.36,0.07,">1 nonsynonymous","D68T W106Q V181A",3
"lib2","SARS-CoV-2","GCGCTCAGGCATTAGC",1,16.91,10.05,-0.79,0.05,2.92,1.03,0,">1 nonsynonymous","P7F D59R K198S",3
"lib2","SARS-CoV-2","GCGCTCATATAAAAAA",4,3.87,NA,NA,NA,NA,NA,NA,"stop","V103F T140* G152Y",3
"lib2","SARS-CoV-2","GCGCTCCACCCGATTT",5,61.47,10.27,-0.56,0.04,2.84,1,0,">1 nonsynonymous","N13D V37Y I104M",3
"lib2","SARS-CoV-2","GCGCTCCTATAAAAAA",2,26.92,9.02,-1.82,0.16,1.55,1.14,0.01,">1 nonsynonymous","N30G L162H",2
"lib2","SARS-CoV-2","GCGCTCGACGATCCAA",1,10.53,10.82,-0.01,0.07,2.82,1.21,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","GCGCTCTAGACTCTTA",3,11.84,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","E10K S19W N157Q",3
"lib2","SARS-CoV-2","GCGCTCTCTATGATAA",10,128.79,10.75,-0.09,0.03,2.91,1.1,0,"1 nonsynonymous","V115S",1
"lib2","SARS-CoV-2","GCGCTGACTAAACCAT",4,98.73,10.56,-0.28,0.04,2.9,1.03,0,"1 nonsynonymous","A105G",1
"lib2","SARS-CoV-2","GCGCTGCGCTCAAAAC",8,194.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51C T63S P149L Y175M",4
"lib2","SARS-CoV-2","GCGCTGGAACCACTTG",3,113.68,6.17,-4.66,0.54,1.5,1.12,0.01,">1 nonsynonymous","L122M G146W F156R Y175Q",4
"lib2","SARS-CoV-2","GCGCTGGGTAATGTAA",1,14.35,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","G9N Y35S Y119R G152C Y175N",5
"lib2","SARS-CoV-2","GCGCTGGTATATCACA",6,29.06,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1H G74P W106E F160T F167A",5
"lib2","SARS-CoV-2","GCGCTTAAAAAGCGAT",3,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D G83P I138M",3
"lib2","SARS-CoV-2","GCGCTTAATTTACTAA",3,39.12,8.48,-2.36,0.07,1.63,1.08,0,">1 nonsynonymous","N64R Y91V G155E",3
"lib2","SARS-CoV-2","GCGCTTATCCAAGGGA",5,20.88,10.37,-0.47,0.07,2.98,1.03,0,">1 nonsynonymous","F44S T55L L60M",3
"lib2","SARS-CoV-2","GCGCTTCCGACATGAA",3,62.52,10.71,-0.13,0.05,2.95,1.06,0,">1 nonsynonymous","R27Y T201L",2
"lib2","SARS-CoV-2","GCGCTTGCATGCGCCC",8,51.02,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5F P82N K87E A89Y G101V F134S",6
"lib2","SARS-CoV-2","GCGCTTGCCTTGCAAT",2,175.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37R N107C P177R",3
"lib2","SARS-CoV-2","GCGCTTGGATAGAAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","A42R E76K D97* Y119S Y159E",5
"lib2","SARS-CoV-2","GCGCTTGGTCGCATTG",4,54.37,9.73,-1.11,0.09,2.16,1.07,0,">1 nonsynonymous","Y39M P133L",2
"lib2","SARS-CoV-2","GCGCTTTCAACTGTTT",2,9.64,8.78,-2.06,0.18,1.82,1.2,0.01,">1 nonsynonymous","P96L S200C",2
"lib2","SARS-CoV-2","GCGCTTTGACGTATTC",19,225.76,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","L95N P149N G155C T170M Q176K",5
"lib2","SARS-CoV-2","GCGGAAAAAACCCAAC",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P P96N P197Q",3
"lib2","SARS-CoV-2","GCGGAAAACCTATGGC",5,63.58,10.88,0.04,0.03,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGGAAAAGTAAACGC",1,22.33,9.31,-1.53,0.16,2.05,1.07,0.02,">1 nonsynonymous","D59S K94S P149R",3
"lib2","SARS-CoV-2","GCGGAAAATTGCTTTG",2,17.22,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","L5M N30M S41D P82T R127Q E135R T201R",7
"lib2","SARS-CoV-2","GCGGAAAGCTGTAACA",8,64.47,9.25,-1.58,0.04,2.96,1.07,0,">1 nonsynonymous","V37C Y119T",2
"lib2","SARS-CoV-2","GCGGAAAGGTTTGAAC",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F S29F G152L",3
"lib2","SARS-CoV-2","GCGGAAATAGTAATCC",2,21.77,8.1,-2.74,0.21,1.5,1.11,0.02,">1 nonsynonymous","Y35M F44Y D90Q L162R",4
"lib2","SARS-CoV-2","GCGGAAATATGATTGA",9,47.7,6.27,-4.56,0.53,1.5,1.17,0.02,">1 nonsynonymous","K56M F167E",2
"lib2","SARS-CoV-2","GCGGAAATTTTTAAGC",17,256.14,10.76,-0.07,0.03,2.91,1.08,0,">1 nonsynonymous","Y39L T85I T201S",3
"lib2","SARS-CoV-2","GCGGAACCAGCCAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4E I28* L95G Y121H",4
"lib2","SARS-CoV-2","GCGGAACCCTTTAACT",3,42.81,8.26,-2.58,0.26,1.84,1.13,0.03,">1 nonsynonymous","K56M E154C G155C K198E",4
"lib2","SARS-CoV-2","GCGGAACGATAAATGC",7,121.92,10.89,0.05,0.04,2.95,1.05,0,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","GCGGAACTCTCCTTAG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85P L131V",2
"lib2","SARS-CoV-2","GCGGAAGTCGACGGGG",9,3.13,NA,NA,NA,NA,NA,NA,"stop","P7E C61R L122* T193I",4
"lib2","SARS-CoV-2","GCGGAATAACCAAATT",1,26.88,10.29,-0.55,0.09,2.93,1.05,0.01,">1 nonsynonymous","G9S D59L Y121H",3
"lib2","SARS-CoV-2","GCGGAATACACTTATT",5,49.55,9.63,-1.21,0.07,2.89,1,0,"1 nonsynonymous","Y165H",1
"lib2","SARS-CoV-2","GCGGAATCATGCCGGA",13,76.9,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C61L E76S S113F P133F",4
"lib2","SARS-CoV-2","GCGGAATGTCTCTTTA",5,27.52,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","R25G Y50R D68T V77D",4
"lib2","SARS-CoV-2","GCGGACAAAACCGGAG",1,22.14,10.77,-0.06,0.05,3,1.04,0,">1 nonsynonymous","L122K I142H",2
"lib2","SARS-CoV-2","GCGGACAAACCTAAAC",11,102.38,10.8,-0.04,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGGACACCATATGCT",3,1.16,NA,NA,NA,NA,NA,NA,"stop","G86E N157* Q168R",3
"lib2","SARS-CoV-2","GCGGACCTTACATTAC",8,60.84,7.48,-3.36,0.37,1.5,1.06,0.04,">1 nonsynonymous","T3I S19G V32Y T55V P149L",5
"lib2","SARS-CoV-2","GCGGACGCGGACACGA",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G K56Q T63E K94G E186D",5
"lib2","SARS-CoV-2","GCGGACTCTTTACTAA",7,94.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I28N C49M R124C R179T",4
"lib2","SARS-CoV-2","GCGGACTGTGTAACTC",1,0.48,NA,NA,NA,NA,NA,NA,"stop","G9* I28L D68R F99I N107G K114I",6
"lib2","SARS-CoV-2","GCGGACTTTATAAAAG",8,0.55,NA,NA,NA,NA,NA,NA,"stop","C31V S69* K114S G146I C158Q F167H",6
"lib2","SARS-CoV-2","GCGGAGAGATCAAACG",9,111.34,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N4S G9R D112W L122V N151H",5
"lib2","SARS-CoV-2","GCGGAGGAACTTTACA",6,8.08,NA,NA,NA,NA,NA,NA,"stop","A14W Y93T G116*",3
"lib2","SARS-CoV-2","GCGGAGGCCGCTCCTG",1,15.89,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12D D112Q S200L",3
"lib2","SARS-CoV-2","GCGGAGTAAATTTCCA",3,25.38,10.77,-0.07,0.08,2.95,1.07,0,">1 nonsynonymous","P54K E141Y",2
"lib2","SARS-CoV-2","GCGGAGTAAGTGATAC",10,59.28,6.23,-4.61,0.7,1.5,1.2,0.03,">1 nonsynonymous","C6R V37I T100P",3
"lib2","SARS-CoV-2","GCGGAGTTATAAAAGA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","A18E F99L N107K G152V R179M S200*",6
"lib2","SARS-CoV-2","GCGGATAAGTTTTCAA",5,45.89,7.66,-3.18,0.39,1.5,1.16,0.04,">1 nonsynonymous","I2T S43P D98K V103T L131M",5
"lib2","SARS-CoV-2","GCGGATACACGAACTG",6,102.43,10.43,-0.41,0.05,2.87,1.09,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","GCGGATATAACCCCCT",1,6.65,10.83,0,0.08,2.99,1.06,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","GCGGATATAAGCATAC",5,31.96,9.42,-1.41,0.12,1.83,1.11,0.01,"1 nonsynonymous","Y50C",1
"lib2","SARS-CoV-2","GCGGATCAAAAATCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","F70* G86D V153I",3
"lib2","SARS-CoV-2","GCGGATCAGTTTTTTT",2,72.75,10.79,-0.05,0.02,2.97,1.04,0,">1 nonsynonymous","F99W Y178F",2
"lib2","SARS-CoV-2","GCGGATCCAGTCTGTT",9,0.62,NA,NA,NA,NA,NA,NA,"stop","I2L I80W I142* Y165L",4
"lib2","SARS-CoV-2","GCGGATGACAGCCTGA",8,196.73,8.75,-2.09,0.08,1.55,1.11,0,">1 nonsynonymous","I2R F8K F160I",3
"lib2","SARS-CoV-2","GCGGATTAGACGTGTT",7,56.69,6,-4.84,1.67,1.5,1.18,0.03,">1 nonsynonymous","C49T A89H V103Y E141L",4
"lib2","SARS-CoV-2","GCGGATTAGGCTACAT",3,41.81,6,-4.84,2,3,1.07,0,">1 nonsynonymous","E10I P177E",2
"lib2","SARS-CoV-2","GCGGATTGGAGGACAG",10,34.88,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","F8L V37L A81F G101S Y143V",5
"lib2","SARS-CoV-2","GCGGCACACAGCCTCC",3,25.13,10.89,0.05,0.07,2.99,1.01,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","GCGGCACCACCTTGAC",8,67.56,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N1V A89E K94Y A105E G117K G152N",6
"lib2","SARS-CoV-2","GCGGCACTTCCCACGA",1,7.65,9.75,-1.08,0.52,1.6,1.12,0.07,">1 nonsynonymous","Y50F K94Y",2
"lib2","SARS-CoV-2","GCGGCAGTACCCCCTG",6,138.1,9.45,-1.38,0.05,2.92,1.08,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","GCGGCATAATTGAAAG",7,157.7,10.21,-0.62,0.06,2.78,1.01,0,">1 nonsynonymous","I2S F47Y S129C",3
"lib2","SARS-CoV-2","GCGGCATAGGGTTTAC",5,0,NA,NA,NA,NA,NA,NA,"stop","K48* C158W F167A T170K V181F",5
"lib2","SARS-CoV-2","GCGGCCCACTACAAGA",9,196.08,10.15,-0.68,0.03,2.94,1.02,0,"1 nonsynonymous","V11Y",1
"lib2","SARS-CoV-2","GCGGCCCCTACGACAA",1,50.68,9.3,-1.54,0.16,1.67,1.16,0.01,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","GCGGCGATGCGAAAAA",1,121.69,10.85,0.01,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGGCTTCTTTAAAAA",3,116.12,10.69,-0.14,0.05,2.92,1.09,0,"1 nonsynonymous","T100Q",1
"lib2","SARS-CoV-2","GCGGGAAACAAAAAAG",6,78.41,9.53,-1.3,0.07,2.77,1.01,0,">1 nonsynonymous","F44V Y123K S147G F160K T170N",5
"lib2","SARS-CoV-2","GCGGGAAACATCACAA",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q S43H L60P G83H I88G G101A E135M",7
"lib2","SARS-CoV-2","GCGGGAACAAAGAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7* A105I Y123R P149K",4
"lib2","SARS-CoV-2","GCGGGAACGGGTAGCT",4,177.99,10.8,-0.04,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGGGAACTAGCGATC",17,6.87,NA,NA,NA,NA,NA,NA,"stop","K56L F99* Y121L",3
"lib2","SARS-CoV-2","GCGGGAAGCTGTTTCA",21,260.65,8.99,-1.84,0.06,2.38,1.07,0,">1 nonsynonymous","F12L C61S L122T Y143M",4
"lib2","SARS-CoV-2","GCGGGACTAGACTGTT",3,39.41,10.28,-0.55,0.13,2.69,1.27,0.01,">1 nonsynonymous","S41T K87S",2
"lib2","SARS-CoV-2","GCGGGACTGGGGCAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V A89H Y119F S129W L162R",5
"lib2","SARS-CoV-2","GCGGGATAAAGCAACC",5,131.83,8.62,-2.22,0.08,2.86,1.03,0,">1 nonsynonymous","K56A N118D K132R I138S F156S",5
"lib2","SARS-CoV-2","GCGGGATCATAAAGTG",3,44.23,10.86,0.03,0.06,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGGGATTGAGATTAA",1,16.21,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","P82T D112T S139R",3
"lib2","SARS-CoV-2","GCGGGCACCATCGATC",10,126.57,8.44,-2.4,0.1,2.85,1.06,0,"1 nonsynonymous","Y175C",1
"lib2","SARS-CoV-2","GCGGGCATTCTAATAT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","Y93N Y119* R127M",3
"lib2","SARS-CoV-2","GCGGGCCGATATCACC",12,156.41,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6R V153F F167V",3
"lib2","SARS-CoV-2","GCGGGCCGTAAAAAAA",3,23.5,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","I72F D90K Y119W",3
"lib2","SARS-CoV-2","GCGGGCTAATGACCCT",3,113.75,10.85,0.01,0.06,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGGGCTAATTCTTTC",7,1.19,NA,NA,NA,NA,NA,NA,"stop","R16* C49M V103T N110L",4
"lib2","SARS-CoV-2","GCGGGGCATGTACGTA",7,43.8,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T100P R136V V173C",3
"lib2","SARS-CoV-2","GCGGGGCTGGCGCTAA",5,15.28,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","I80R S113L N120C",3
"lib2","SARS-CoV-2","GCGGGGGAGAACAAAG",4,18.17,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","P54H T55A L95Q G101C N171A",5
"lib2","SARS-CoV-2","GCGGGGTAAAACCGGG",1,35.98,10.02,-0.81,0.08,2.6,1.01,0,">1 nonsynonymous","N4R D90V",2
"lib2","SARS-CoV-2","GCGGGTACTAAGCCGG",16,230.75,10.55,-0.29,0.04,2.94,1.05,0,">1 nonsynonymous","S41Y R78C L122E S129M L188M",5
"lib2","SARS-CoV-2","GCGGGTCACCAATACC",3,24.71,10.09,-0.74,0.09,2.64,1.06,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","GCGGGTGACAGAGGAA",7,124.88,10.82,-0.02,0.04,2.87,1.13,0,"1 nonsynonymous","N120M",1
"lib2","SARS-CoV-2","GCGGGTGGCACTCTGC",13,66.99,8.55,-2.28,0.12,2.13,1.04,0,">1 nonsynonymous","L131A G174E",2
"lib2","SARS-CoV-2","GCGGGTTGACCCCACG",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L V71T Q144I P197A",4
"lib2","SARS-CoV-2","GCGGTAACAACGCCAA",4,61.67,10.77,-0.06,0.05,2.9,1.11,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","GCGGTAACACTACACG",5,37.77,10.14,-0.7,0.05,2.95,1.03,0,">1 nonsynonymous","N1K K87I I142F",3
"lib2","SARS-CoV-2","GCGGTAATCAAGTATT",8,55.46,9.62,-1.22,0.15,1.8,1.05,0.01,">1 nonsynonymous","N13L A89C A192P",3
"lib2","SARS-CoV-2","GCGGTACCAAAACTAC",10,18.71,6.6,-4.23,0.79,1.5,1.36,0.07,">1 nonsynonymous","T15Y D59V D112M P161F",4
"lib2","SARS-CoV-2","GCGGTACTTGAATCCC",10,193.5,10.92,0.08,0.05,2.92,1.09,0,"1 nonsynonymous","N130R",1
"lib2","SARS-CoV-2","GCGGTAGATCTCAACG",10,190.35,10.67,-0.17,0.02,2.97,1.03,0,">1 nonsynonymous","P7C Y35M",2
"lib2","SARS-CoV-2","GCGGTAGCCGATCGAC",1,17.12,10.75,-0.09,0.06,2.89,1.12,0,">1 nonsynonymous","L122V S129R",2
"lib2","SARS-CoV-2","GCGGTAGTTCGTGTGG",12,133.42,10.48,-0.36,0.04,2.9,1.1,0,">1 nonsynonymous","V37C D59G",2
"lib2","SARS-CoV-2","GCGGTATAATTACTTA",1,13.34,10.77,-0.07,0.07,2.65,1.38,0,"1 nonsynonymous","G152K",1
"lib2","SARS-CoV-2","GCGGTATCAAATGAGA",7,27.42,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F8V V77M G116Q N130S T140R P169H",6
"lib2","SARS-CoV-2","GCGGTATGAAACGGAG",6,59.38,10.82,-0.01,0.09,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGGTATTTAGTATAA",15,3.45,NA,NA,NA,NA,NA,NA,"stop","L57*",1
"lib2","SARS-CoV-2","GCGGTCAACTAACTTA",10,105.87,6.99,-3.84,0.11,2.04,1.12,0,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","GCGGTCACAAACCCAA",1,62.85,9.85,-0.98,0.05,2.64,1.01,0,">1 nonsynonymous","I2M C31T G51R",3
"lib2","SARS-CoV-2","GCGGTCATTGGGAGAT",8,6.76,NA,NA,NA,NA,NA,NA,"stop","N110G F134*",2
"lib2","SARS-CoV-2","GCGGTCCATGCCGTCT",6,16.08,10.86,0.02,0.14,2.74,1.14,0.01,"synonymous","",0
"lib2","SARS-CoV-2","GCGGTCGTTAGTCATG",1,73.56,9.17,-1.67,0.04,2.99,1.03,0,">1 nonsynonymous","C61F T100V Y119M S184T",4
"lib2","SARS-CoV-2","GCGGTGAACAACAATT",2,26.41,7.93,-2.91,0.25,1.5,1.08,0.03,">1 nonsynonymous","C61R P82T D98V",3
"lib2","SARS-CoV-2","GCGGTGATATATATAT",5,63.91,9.23,-1.6,0.05,2.46,1.09,0,">1 nonsynonymous","P7T S41T I142K",3
"lib2","SARS-CoV-2","GCGGTGCTACGCTTTT",6,10.11,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","Y50T G86A F99S T140D T148S V173N",6
"lib2","SARS-CoV-2","GCGGTGGATACATTAC",7,121.81,9.35,-1.49,0.05,2.67,1.02,0,">1 nonsynonymous","N118Y S129Y L188Y",3
"lib2","SARS-CoV-2","GCGGTGTGCGAATGCC",5,0.78,NA,NA,NA,NA,NA,NA,"stop","V115H G152*",2
"lib2","SARS-CoV-2","GCGGTGTTATTGCGCT",10,52.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E G83T",2
"lib2","SARS-CoV-2","GCGGTTAATAAGAGAT",1,8.74,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49I Y93K F99T",3
"lib2","SARS-CoV-2","GCGGTTAGCTACCAAG",5,72.63,10.87,0.04,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGGTTAGTAGACCGA",9,1.05,NA,NA,NA,NA,NA,NA,"stop","V20G Y93* D137W",3
"lib2","SARS-CoV-2","GCGGTTATAGCCTCGG",3,25.81,7.06,-3.77,0.37,1.5,1.01,0.03,"1 nonsynonymous","C49R",1
"lib2","SARS-CoV-2","GCGGTTATAGGTGTCG",8,3.85,NA,NA,NA,NA,NA,NA,"stop","I2* G74K P82E P133V",4
"lib2","SARS-CoV-2","GCGGTTATTATGCAAA",9,153.35,9.86,-0.98,0.07,2.03,1.04,0,">1 nonsynonymous","S36A G51Y",2
"lib2","SARS-CoV-2","GCGGTTCACAAAGATA",16,118.93,6,-4.84,1.13,1.5,1.12,0,">1 nonsynonymous","G51I L57T Y123D",3
"lib2","SARS-CoV-2","GCGGTTCACCATAACG",9,1.66,NA,NA,NA,NA,NA,NA,"stop","R124* E141M G174L",3
"lib2","SARS-CoV-2","GCGGTTCGTACCACAA",7,132.3,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D112I L122N S147V G172D",4
"lib2","SARS-CoV-2","GCGGTTCGTCCTTAAT",2,66.48,8.71,-2.12,0.06,2.96,1.06,0,">1 nonsynonymous","S36A A81S F126K",3
"lib2","SARS-CoV-2","GCGGTTGAAACATTGA",3,29.22,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S36W D68K V77K I88Q P161L",5
"lib2","SARS-CoV-2","GCGGTTGATGTGCATT",8,1.16,NA,NA,NA,NA,NA,NA,"stop","L60T I104* Y119A",3
"lib2","SARS-CoV-2","GCGTAAAAACATCCAG",9,111.35,8.03,-2.8,0.15,1.56,1.15,0.01,">1 nonsynonymous","L5M G74V",2
"lib2","SARS-CoV-2","GCGTAAAAAGGGTAAC",2,0.15,NA,NA,NA,NA,NA,NA,"stop","T3A Y39R G86F Y91F I104Y S147V C150S F160*",8
"lib2","SARS-CoV-2","GCGTAAAACGAGGCAT",9,101.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I88L I104C Y121D",3
"lib2","SARS-CoV-2","GCGTAAAATAAGCAAG",11,23.66,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13Y I88T G172A H189Y",4
"lib2","SARS-CoV-2","GCGTAAAATACTTTCC",1,27.48,10.72,-0.12,0.07,2.9,1.12,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","GCGTAAACAAAGAAAA",2,13.71,10.52,-0.32,0.11,2.98,1.01,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","GCGTAAACACGGCGCA",9,3.04,NA,NA,NA,NA,NA,NA,"stop","D34* L95W N118Y Q168Y",4
"lib2","SARS-CoV-2","GCGTAAATACTGGACT",1,18.77,7.24,-3.6,0.34,1.5,1.05,0.05,">1 nonsynonymous","R27S A42S S69M K94M N130Y",5
"lib2","SARS-CoV-2","GCGTAAATATATAACA",4,55.46,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S41E G83D P177M",3
"lib2","SARS-CoV-2","GCGTAAATCCAATTAG",4,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I S45I N92F A105L K132S",5
"lib2","SARS-CoV-2","GCGTAAATGGTGTATA",7,52.77,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4T R25K R124E",3
"lib2","SARS-CoV-2","GCGTAACAAAAAATTA",1,29.26,10.44,-0.39,0.07,2.83,1.19,0,"1 nonsynonymous","G116Y",1
"lib2","SARS-CoV-2","GCGTAACCAGAGCCCT",7,4.01,NA,NA,NA,NA,NA,NA,"stop","E10I I28* K114R G155A",4
"lib2","SARS-CoV-2","GCGTAACCGAAAATAT",1,17.08,10.74,-0.09,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GCGTAACGTATTAAAA",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H F62R Y165C",3
"lib2","SARS-CoV-2","GCGTAAGACTCTCCAA",9,96.4,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L60R Y119S F160V G172K",4
"lib2","SARS-CoV-2","GCGTAAGATATTACAT",6,45.05,10.73,-0.1,0.07,2.96,1.03,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","GCGTAATATCCAAGGA",8,37.7,6,-4.84,1.69,1.5,1.19,0.02,">1 nonsynonymous","A14K V77Q T85H K94F",4
"lib2","SARS-CoV-2","GCGTAATCGTTTACAT",2,0.71,NA,NA,NA,NA,NA,NA,"stop","Y35* N64S D97T W106Q P197R",5
"lib2","SARS-CoV-2","GCGTAATGCACTTGCT",1,5.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K Y66G V103Y R124D",4
"lib2","SARS-CoV-2","GCGTAATTGATTCCAA",8,111.42,9.71,-1.12,0.06,2.26,1.02,0,">1 nonsynonymous","V11H S36L S129A",3
"lib2","SARS-CoV-2","GCGTAATTGCTCGTCA",2,53.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R127G G146P",2
"lib2","SARS-CoV-2","GCGTACATGGTTATAA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87T W106R E135V",3
"lib2","SARS-CoV-2","GCGTACATTACAAGCT",13,145.25,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8K V37I N107S I138N P149W G155D N171E",7
"lib2","SARS-CoV-2","GCGTACCAATTCGTGC",6,35.1,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y21V N40R L57P S139Y A192N",5
"lib2","SARS-CoV-2","GCGTACCCCCACAGGT",6,88.82,9.72,-1.11,0.04,2.89,1.04,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","GCGTACCCTAGCTAAT",4,206.9,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12Y D68L N107H G155R",4
"lib2","SARS-CoV-2","GCGTACGAGGGTAAAC",6,14,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","R16N Y35G L95P K128H",4
"lib2","SARS-CoV-2","GCGTACGCCGCTAGCG",10,39.27,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","I104G A145D Y178I",3
"lib2","SARS-CoV-2","GCGTACGCCTTACTTT",3,35.25,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","I2S F44H P133H C158A",4
"lib2","SARS-CoV-2","GCGTACGTGACAAATA",4,99.47,10.85,0.01,0.05,2.97,1.05,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GCGTACTTTCATAAGG",6,8.06,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","I28T K48D C61P L95R",4
"lib2","SARS-CoV-2","GCGTAGAATATAACAA",1,74.98,10.29,-0.54,0.07,2.96,1.06,0,">1 nonsynonymous","V37F P177A K198C",3
"lib2","SARS-CoV-2","GCGTAGAGGTCCCGAT",3,16.83,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D90L F99N R127N Q163T",4
"lib2","SARS-CoV-2","GCGTAGATAGAAGTCA",1,19.64,6.78,-4.06,0.56,1.5,1.23,0.06,">1 nonsynonymous","G9E Y93C E135L Y178W",4
"lib2","SARS-CoV-2","GCGTAGATTGGAAATA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63I I104R G116F C150Y",4
"lib2","SARS-CoV-2","GCGTAGCATTACCACC",7,101.81,10.35,-0.48,0.03,2.94,1.07,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","GCGTAGCTACATAATC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","GCGTAGGACGCAATTG",3,60.79,10.13,-0.71,0.04,2.84,1.06,0,">1 nonsynonymous","C31Q Y178F",2
"lib2","SARS-CoV-2","GCGTAGGACGCTAGCG",4,27.22,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","D112S Y119R A145Y G155V",4
"lib2","SARS-CoV-2","GCGTAGGTACTGTCAT",1,13.21,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","S53T L60S I72K K87F N107V",5
"lib2","SARS-CoV-2","GCGTATAAAAATATAC",9,15.42,7.61,-3.23,0.31,1.51,1.06,0.03,">1 nonsynonymous","V65F I142N G174W",3
"lib2","SARS-CoV-2","GCGTATAAAAGAAATC",10,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119L T148D F156M",3
"lib2","SARS-CoV-2","GCGTATAAAAGTAGTC",2,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73H",1
"lib2","SARS-CoV-2","GCGTATAAAGATAACG",3,21.87,6.21,-4.63,0.66,1.5,1.2,0.02,">1 nonsynonymous","D59V N107Q A145T",3
"lib2","SARS-CoV-2","GCGTATAACAGCAACG",1,23.8,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15E D59M E135A G152N P161G",5
"lib2","SARS-CoV-2","GCGTATACCAACAATT",3,53.93,6.89,-3.94,0.15,1.9,1.09,0.01,">1 nonsynonymous","S45T C150S",2
"lib2","SARS-CoV-2","GCGTATATTAGTCCCA",19,76.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49N E141P",2
"lib2","SARS-CoV-2","GCGTATATTGCGCCCT",5,43.54,6,-4.84,1.11,1.5,1.2,0.03,">1 nonsynonymous","N13P Y39I D137S G174S",4
"lib2","SARS-CoV-2","GCGTATCGTTCCGAAA",1,8.45,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","N107R P149C V181M",3
"lib2","SARS-CoV-2","GCGTATCTCGTACACT",8,112.03,9.09,-1.74,0.05,2.84,1.1,0,">1 nonsynonymous","R27G N171E",2
"lib2","SARS-CoV-2","GCGTATCTGAGGCTAC",1,40.54,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","Q163T R179G",2
"lib2","SARS-CoV-2","GCGTATGAACATTTTA",3,13.48,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","R27M N92R K199N",3
"lib2","SARS-CoV-2","GCGTATGACACAACCA",1,12.36,9.84,-1,0.12,2.64,1,0.01,">1 nonsynonymous","Q144L Q163L T201I",3
"lib2","SARS-CoV-2","GCGTATGATGCATAGC",4,18.37,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N40V D68V Y91V",3
"lib2","SARS-CoV-2","GCGTATGATTGCCTTA",5,81.27,10.96,0.13,0.06,2.94,1.07,0,">1 nonsynonymous","V37G N130R",2
"lib2","SARS-CoV-2","GCGTATGCATTACAAG",7,5.9,NA,NA,NA,NA,NA,NA,"stop","E10W S43* D90G Y143S",4
"lib2","SARS-CoV-2","GCGTATTAATGCCCTT",1,23.37,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L5M F12K N107I D137N",4
"lib2","SARS-CoV-2","GCGTATTTATCGAGAC",17,322.92,10.2,-0.64,0.03,2.87,1.03,0,">1 nonsynonymous","P7I G196R",2
"lib2","SARS-CoV-2","GCGTATTTATGAGATT",10,66.15,8.69,-2.15,0.11,1.74,1.07,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","GCGTATTTCAGCGGAC",2,44.61,8.56,-2.27,0.18,2.17,1,0.01,">1 nonsynonymous","S108I P197R",2
"lib2","SARS-CoV-2","GCGTCAAAAAGAACTT",2,22.96,9.88,-0.95,0.09,2.14,1.09,0,">1 nonsynonymous","R27M R136F",2
"lib2","SARS-CoV-2","GCGTCAACCTCAAAGC",8,27.02,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","A89N R127L P133S",3
"lib2","SARS-CoV-2","GCGTCAAGAACACCAA",2,18.02,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","V65K N110Q Y143Q",3
"lib2","SARS-CoV-2","GCGTCAATATACTCAG",7,152.88,10.65,-0.18,0.03,2.95,1.05,0,"1 nonsynonymous","T46A",1
"lib2","SARS-CoV-2","GCGTCACAAAACGACG",16,66.54,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L131A G155Y V181C P197S",4
"lib2","SARS-CoV-2","GCGTCACCGGATTCCC",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A W106S",2
"lib2","SARS-CoV-2","GCGTCACGACGTCATG",4,11.37,6.16,-4.68,0.81,1.5,1.24,0.03,">1 nonsynonymous","V65N V77R F134I",3
"lib2","SARS-CoV-2","GCGTCACGGGCGTTCA",3,51.59,9.77,-1.07,0.08,1.97,1,0,">1 nonsynonymous","V37L S45A A105K",3
"lib2","SARS-CoV-2","GCGTCACGTCGCGCAC",7,17.66,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N13V T63A P149S F167Y",4
"lib2","SARS-CoV-2","GCGTCAGAAACCTAAG",8,1.22,NA,NA,NA,NA,NA,NA,"stop","R73* P96*",2
"lib2","SARS-CoV-2","GCGTCATACCCACTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","K26*",1
"lib2","SARS-CoV-2","GCGTCATCAGTCATCT",2,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A K94D",2
"lib2","SARS-CoV-2","GCGTCATCGTTTGTAC",5,64.22,10.88,0.05,0.04,2.95,1.07,0,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","GCGTCATGCGATACAC",4,35.77,10.21,-0.63,0.06,2.89,1,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","GCGTCCAAACTTGCCG",8,35.26,8.6,-2.23,0.31,1.5,1.01,0.05,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","GCGTCCAATAAAACGC",6,59.11,8.21,-2.62,0.2,1.75,1.18,0.01,">1 nonsynonymous","G83R D112L N130C",3
"lib2","SARS-CoV-2","GCGTCCCACGCAATGT",4,505.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14K Y143W Q176F",3
"lib2","SARS-CoV-2","GCGTCGCATTAAACCC",2,29.87,8.39,-2.44,0.4,1.5,1.08,0.07,">1 nonsynonymous","D90R C102G",2
"lib2","SARS-CoV-2","GCGTCGGTACGCCGCA",2,45.09,10.76,-0.08,0.05,2.92,1.09,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","GCGTCTAAAAGGTAGC",1,26.27,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","C6G L131S Q176L",3
"lib2","SARS-CoV-2","GCGTCTAATACCATGA",4,96.99,10.05,-0.78,0.07,2.71,1.02,0,">1 nonsynonymous","L57F D98A",2
"lib2","SARS-CoV-2","GCGTCTGAAAGATAAC",14,243.01,10.46,-0.38,0.02,2.94,1.04,0,"1 nonsynonymous","N58W",1
"lib2","SARS-CoV-2","GCGTCTGATATGGGGT",5,4.63,NA,NA,NA,NA,NA,NA,"stop","L60E F99Y N107D G155* T201V",5
"lib2","SARS-CoV-2","GCGTCTGTATTTCCTA",8,42.34,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","K56M D98L D112N P133S T170F",5
"lib2","SARS-CoV-2","GCGTGAACTTCCTCTT",3,7.79,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","C49H",1
"lib2","SARS-CoV-2","GCGTGAATTCGCGGCT",4,27.25,10.31,-0.52,0.07,2.81,1.11,0,">1 nonsynonymous","A33G V37L D90L",3
"lib2","SARS-CoV-2","GCGTGACTCAGAAAAA",7,161.54,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28S L95F G146N S184Y",4
"lib2","SARS-CoV-2","GCGTGCGATGATTTAA",3,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A C102N",2
"lib2","SARS-CoV-2","GCGTGCTAACCTCAGT",16,29.03,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","K56P A89W I104R R124E Y178G",5
"lib2","SARS-CoV-2","GCGTGTGAGATTACAC",3,76.95,10.75,-0.09,0.05,2.9,1.12,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","GCGTGTTCTTACCACG",5,3.08,NA,NA,NA,NA,NA,NA,"stop","V20G N40L Y91A W106* P149L",5
"lib2","SARS-CoV-2","GCGTTAACCCTCACCC",4,36.08,8.06,-2.78,0.22,1.5,1,0.03,">1 nonsynonymous","G51I V65M A145C",3
"lib2","SARS-CoV-2","GCGTTAACCTTTTCCA",2,49.73,10.71,-0.12,0.06,2.81,1.17,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","GCGTTAAGTAAACAAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","S36V Y119* K128M",3
"lib2","SARS-CoV-2","GCGTTAAGTATCAAAA",12,92.8,10.6,-0.24,0.06,2.86,1.08,0,">1 nonsynonymous","C61T T100R N120E",3
"lib2","SARS-CoV-2","GCGTTAATGGAAAAAA",1,21.96,6.59,-4.25,0.44,1.5,1.08,0.02,">1 nonsynonymous","F44P G51V N64L",3
"lib2","SARS-CoV-2","GCGTTACAATCCATTA",3,84.48,9.49,-1.35,0.09,2.46,1.12,0,"1 nonsynonymous","P161Q",1
"lib2","SARS-CoV-2","GCGTTACATGTACCTA",3,85.07,9.65,-1.19,0.03,2.96,1.06,0,">1 nonsynonymous","K48Q N118H",2
"lib2","SARS-CoV-2","GCGTTAGGGTCCAACT",2,0.07,NA,NA,NA,NA,NA,NA,"stop","N58I P161*",2
"lib2","SARS-CoV-2","GCGTTAGGTAAACAAA",7,2.02,NA,NA,NA,NA,NA,NA,"stop","N13R Y66C K114*",3
"lib2","SARS-CoV-2","GCGTTAGTATAGGAGT",4,70.76,10.62,-0.21,0.05,2.93,1.05,0,">1 nonsynonymous","E186I K199F",2
"lib2","SARS-CoV-2","GCGTTAGTTTGAGCAC",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D N64I S69F A89S L162M",5
"lib2","SARS-CoV-2","GCGTTATAGATATGAA",7,104.67,9.18,-1.66,0.06,2.5,1.07,0,">1 nonsynonymous","D97S N118F",2
"lib2","SARS-CoV-2","GCGTTATCTAAGCCTG",1,12.82,6,-4.84,2,3,1,0,">1 nonsynonymous","I104W G116T I138S Q176S T201E",5
"lib2","SARS-CoV-2","GCGTTATTGCTTAATA",4,8.21,7.27,-3.56,2,1.5,1.06,0.04,">1 nonsynonymous","S53P S113R N151L V181A",4
"lib2","SARS-CoV-2","GCGTTCAACGAATTGT",9,67.52,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","R25W S45L",2
"lib2","SARS-CoV-2","GCGTTCACAATGGTAG",1,9.53,10.74,-0.1,0.05,2.97,1.02,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","GCGTTCACACTAGAGA",1,48.26,8.09,-2.75,0.35,1.5,1,0.04,">1 nonsynonymous","S45V N157F",2
"lib2","SARS-CoV-2","GCGTTCACATTAGAAC",14,123.65,6.2,-4.63,0.51,1.5,1.14,0.01,">1 nonsynonymous","G117N G146M",2
"lib2","SARS-CoV-2","GCGTTCAGACTTAGAA",1,15.13,10.23,-0.6,0.14,2.49,1,0.01,">1 nonsynonymous","F47Y D97K G152E",3
"lib2","SARS-CoV-2","GCGTTCCAAATAGAAC",23,208.45,6,-4.84,1.87,1.5,1.17,0,">1 nonsynonymous","F44I Y50T I138G C150Y K198A",5
"lib2","SARS-CoV-2","GCGTTCCAGACAAACA",5,135.32,10.33,-0.5,0.03,2.95,1.03,0,">1 nonsynonymous","C61P F134S K198A",3
"lib2","SARS-CoV-2","GCGTTCCCTTTGCCTT",2,1.9,NA,NA,NA,NA,NA,NA,"stop","Y121* N151P",2
"lib2","SARS-CoV-2","GCGTTCCGTTACGCTA",2,23.16,9.79,-1.05,0.12,1.98,1,0.01,">1 nonsynonymous","V65A A105F",2
"lib2","SARS-CoV-2","GCGTTCGAATAAACGA",1,97.12,10.81,-0.02,0.05,2.99,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GCGTTCGAGAGGTCTT",12,171.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25F T63L N107Q S139D K199H",5
"lib2","SARS-CoV-2","GCGTTCGATAACGTAA",2,32.99,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A22V F47M T55E V77K T100L G117P K132Q",7
"lib2","SARS-CoV-2","GCGTTCTATTCCACAG",3,1.3,NA,NA,NA,NA,NA,NA,"stop","L122T T201*",2
"lib2","SARS-CoV-2","GCGTTCTCTGTTTCCA",1,8.26,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","D90V D112L Y159G",3
"lib2","SARS-CoV-2","GCGTTCTTAATTATAT",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V T46R L125V L183G",4
"lib2","SARS-CoV-2","GCGTTGAACCTATCAA",1,40.7,9.4,-1.44,0.05,2.85,1.09,0,">1 nonsynonymous","F12I D97G L125V",3
"lib2","SARS-CoV-2","GCGTTGACCACATTTT",5,63.62,10.41,-0.43,0.03,2.95,1.04,0,">1 nonsynonymous","S29T L38F S41C",3
"lib2","SARS-CoV-2","GCGTTGAGGCTTAAAC",21,91.64,9.12,-1.71,0.23,1.5,1.03,0.03,">1 nonsynonymous","T15D Y50M",2
"lib2","SARS-CoV-2","GCGTTGATTACAATAA",21,156.98,8.67,-2.16,0.17,1.54,1.1,0.01,">1 nonsynonymous","Y121S S139L",2
"lib2","SARS-CoV-2","GCGTTGATTGATTGAT",1,22.3,6,-4.84,2,3,1.11,0,">1 nonsynonymous","K56Q G86L D97T I138D",4
"lib2","SARS-CoV-2","GCGTTGCATATTCTTA",1,45.52,10.04,-0.79,0.05,2.8,1.05,0,">1 nonsynonymous","P7M N13H",2
"lib2","SARS-CoV-2","GCGTTGGGAGAATACG",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I D98W Y119G F167Q F185S",5
"lib2","SARS-CoV-2","GCGTTGGGCACTTGAT",7,77.62,10.75,-0.09,0.11,2.83,1.14,0,">1 nonsynonymous","V37N P54L",2
"lib2","SARS-CoV-2","GCGTTGGTCCGTACTC",10,45.6,8.38,-2.46,0.27,1.5,1,0.04,">1 nonsynonymous","L60M A105E",2
"lib2","SARS-CoV-2","GCGTTGTAACCGTTAG",1,29.05,9.56,-1.28,0.08,1.87,1.07,0,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","GCGTTTCGAGTCCAAC",2,29.44,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49V T55C C150R",3
"lib2","SARS-CoV-2","GCGTTTCTCTAAAAAG",3,61.9,10.6,-0.24,0.04,3,1.02,0,">1 nonsynonymous","I2G T100S",2
"lib2","SARS-CoV-2","GCGTTTGACGAGTGGT",15,101.18,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V20R A89S",2
"lib2","SARS-CoV-2","GCGTTTGGCATACAAA",4,55.24,7,-3.83,0.29,1.5,1.06,0.03,">1 nonsynonymous","N4L V37S R127N G196L",4
"lib2","SARS-CoV-2","GCGTTTGTGAACAAAC",3,50.16,6,-4.84,0.75,2.04,1.11,0,"1 nonsynonymous","C158Y",1
"lib2","SARS-CoV-2","GCTAAAAAACCTAAGT",3,42.17,6,-4.84,0.89,1.5,1.13,0.01,">1 nonsynonymous","Y39S F70L V115S",3
"lib2","SARS-CoV-2","GCTAAAAAATAAAAAA",6,100.91,9.73,-1.11,0.06,2.31,1.04,0,">1 nonsynonymous","W106R G152K",2
"lib2","SARS-CoV-2","GCTAAAAACGAAAAGG",4,24.96,6.95,-3.88,0.3,1.5,1.12,0.02,">1 nonsynonymous","F12N S36R W106F",3
"lib2","SARS-CoV-2","GCTAAAAAGCATCTCC",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E F47G G83C D90R K128A",5
"lib2","SARS-CoV-2","GCTAAAAAGCGCTACC",4,57.47,10.46,-0.38,0.04,2.88,1.06,0,">1 nonsynonymous","N4S S29W",2
"lib2","SARS-CoV-2","GCTAAAAATTTATATC",4,0.06,NA,NA,NA,NA,NA,NA,"stop","P82F A89*",2
"lib2","SARS-CoV-2","GCTAAAACACGAACAT",3,14.35,7.92,-2.92,0.19,1.55,1.17,0.02,">1 nonsynonymous","R16F S29E S41T K87P P161S",5
"lib2","SARS-CoV-2","GCTAAAACACGGGAAT",4,14.3,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D98S V103L P149K F160Y",4
"lib2","SARS-CoV-2","GCTAAAACATCAAGAA",14,271.47,10.7,-0.14,0.02,2.93,1.08,0,">1 nonsynonymous","L122M K132P",2
"lib2","SARS-CoV-2","GCTAAAACCAATATAT",12,205.8,10.66,-0.18,0.03,2.89,1.07,0,">1 nonsynonymous","K87R S129R",2
"lib2","SARS-CoV-2","GCTAAAACCGTCTCTA",2,32.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L D68N P197E",3
"lib2","SARS-CoV-2","GCTAAAACCTATACAA",2,34.63,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G83H S113Y Q144S G172F",4
"lib2","SARS-CoV-2","GCTAAAACCTCCTCAT",6,56.18,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6E F12R S29F F99Y T201C",5
"lib2","SARS-CoV-2","GCTAAAAGAAGACTAG",5,17.41,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","V77H D98F R127G P133N P197M",5
"lib2","SARS-CoV-2","GCTAAAAGACTATACA",2,9.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3R T55I C61R W106M S139H Y178E",6
"lib2","SARS-CoV-2","GCTAAACATCAACAGA",4,6.8,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","N64S D97C N107V G152R P169Q",5
"lib2","SARS-CoV-2","GCTAAACCGCACCGCC",4,79.27,7.37,-3.47,0.1,2.18,1.14,0,"1 nonsynonymous","C150S",1
"lib2","SARS-CoV-2","GCTAAACTATTCTCCT",6,116.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48F D98E A105G G152L P169W Y178I",6
"lib2","SARS-CoV-2","GCTAAACTGCGCAACA",6,1.62,NA,NA,NA,NA,NA,NA,"stop","S45* G51Q A89S P96S G101S A192L",6
"lib2","SARS-CoV-2","GCTAAACTGGTATGTA",8,410.49,10.59,-0.25,0.03,2.98,1.03,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GCTAAAGAACAGTGGG",13,98.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88L Y119L Y175H",3
"lib2","SARS-CoV-2","GCTAAAGAGCCAGAAA",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y K56H V65K",3
"lib2","SARS-CoV-2","GCTAAAGATGGATAAA",3,7.1,8.83,-2.01,0.29,1.76,1.11,0.03,">1 nonsynonymous","V20S V37H P149L",3
"lib2","SARS-CoV-2","GCTAAAGCAGTTATAG",2,7.6,10.52,-0.31,0.13,2.85,1.19,0,">1 nonsynonymous","P54Y K56N T140V",3
"lib2","SARS-CoV-2","GCTAAAGCGGACTCTT",4,63.98,6,-4.84,2,3,1.23,0,">1 nonsynonymous","V77K G146I",2
"lib2","SARS-CoV-2","GCTAAAGCGTTGATCC",11,119.2,8.37,-2.47,0.11,1.86,1.11,0,">1 nonsynonymous","N4Y T15F Y119V",3
"lib2","SARS-CoV-2","GCTAAAGCTCACAGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139G G152Y Y178F L187P P197G",5
"lib2","SARS-CoV-2","GCTAAAGCTCTATTCG",7,103.02,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G83S G86L K128I Y165D",4
"lib2","SARS-CoV-2","GCTAAAGGAACTACTT",5,19.42,10.17,-0.67,0.13,2.05,1.05,0.01,">1 nonsynonymous","A42G P96H P149H T201G",4
"lib2","SARS-CoV-2","GCTAAAGGGCCCAAAG",4,11.75,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2N A18M R25K L95P V103K V153F P197M",7
"lib2","SARS-CoV-2","GCTAAATAACTAAACT",5,111.8,10.85,0.01,0.05,2.88,1.09,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","GCTAAATAAGACGTAG",3,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F S129I D137E",3
"lib2","SARS-CoV-2","GCTAAATATACAATAA",11,82.58,10.16,-0.68,0.06,2.73,1.01,0,">1 nonsynonymous","N64I F134C",2
"lib2","SARS-CoV-2","GCTAAATATCTGGAAC",4,60.74,10.06,-0.78,0.09,2.52,1.05,0,"1 nonsynonymous","F47K",1
"lib2","SARS-CoV-2","GCTAAATCAACCCCGA",4,14.79,6.88,-3.95,0.53,1.5,1,0.06,">1 nonsynonymous","D59N F99C T148C S184E T201S",5
"lib2","SARS-CoV-2","GCTAAATCTGACTCCC",2,60.54,9.8,-1.03,0.06,2.21,1.09,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","GCTAAATGAGCCAGAT",1,103.06,8.91,-1.93,0.08,2.44,1.07,0,">1 nonsynonymous","K87T Y165L",2
"lib2","SARS-CoV-2","GCTAAATTAATAACAA",7,29.93,6.86,-3.98,0.32,1.5,1.13,0.02,"1 nonsynonymous","V182L",1
"lib2","SARS-CoV-2","GCTAAATTTAGAAGCC",4,164.23,10.04,-0.8,0.08,2.56,1.06,0,">1 nonsynonymous","A14E R27P",2
"lib2","SARS-CoV-2","GCTAACAAAGAGATAA",4,29.35,10.52,-0.31,0.07,2.98,1,0,"1 nonsynonymous","E10R",1
"lib2","SARS-CoV-2","GCTAACAAATAAGTTA",5,91.04,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V71I A145E Y165G Q176F",4
"lib2","SARS-CoV-2","GCTAACAACAGTCACT",3,31.17,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y50V L95H",2
"lib2","SARS-CoV-2","GCTAACAACCCAAAAC",2,26.02,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","C61W T63C S139P",3
"lib2","SARS-CoV-2","GCTAACAAGCTCCTTA",1,4.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92W",1
"lib2","SARS-CoV-2","GCTAACAATTTCGTAT",10,46.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15F P82I Y93T N120T Q144Y T193I",6
"lib2","SARS-CoV-2","GCTAACACAAGCAAAG",1,22.03,10.75,-0.08,0.02,3,1.02,0,"1 nonsynonymous","F126L",1
"lib2","SARS-CoV-2","GCTAACCACCCGGACG",18,5.25,NA,NA,NA,NA,NA,NA,"stop","Y119* T201S",2
"lib2","SARS-CoV-2","GCTAACCCAACACTGA",2,0.19,NA,NA,NA,NA,NA,NA,"stop","L5C L38* A42I F99N G166L G174H",6
"lib2","SARS-CoV-2","GCTAACCCTAGGAGGT",3,0,NA,NA,NA,NA,NA,NA,"stop","F126S Y143R F160* F167H P177E",5
"lib2","SARS-CoV-2","GCTAACCGGGCCCTAG",2,6.93,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A33G L60G V180F",3
"lib2","SARS-CoV-2","GCTAACCGTCCCTAAC",2,98.36,10.82,-0.02,0.06,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTAACCTTCTGATCA",9,71.56,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G74P N107Y S147H",3
"lib2","SARS-CoV-2","GCTAACCTTTCTTACA",10,71.96,8.95,-1.89,0.1,1.76,1.13,0,">1 nonsynonymous","A42V A105T Y121Q S129L",4
"lib2","SARS-CoV-2","GCTAACGAAGAATCTT",1,31.1,9.24,-1.59,0.04,2.93,1.06,0,">1 nonsynonymous","S113T Q168R",2
"lib2","SARS-CoV-2","GCTAACGACCATACCA",8,130.72,10.58,-0.26,0.03,2.93,1.06,0,"1 nonsynonymous","A33H",1
"lib2","SARS-CoV-2","GCTAACGCGACGATTT",3,33.3,10.56,-0.28,0.07,2.98,1.03,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","GCTAACTCACGATCCA",7,98.6,10.8,-0.04,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTAACTTATCCATTT",7,19.99,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y50Q I72L W106M E135W E154G",5
"lib2","SARS-CoV-2","GCTAAGAATCTACACC",1,6.62,9.64,-1.2,0.1,1.97,1,0.01,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","GCTAAGATGATTTAAC",2,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R S69M I104S N120L G146V",5
"lib2","SARS-CoV-2","GCTAAGCAGGTGGAGT",3,7.03,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","A33F T55L A89I W106G",4
"lib2","SARS-CoV-2","GCTAAGCCTGGCATTT",1,55.52,10.85,0.02,0.06,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTAAGCTCCGTAGGG",5,48.43,NA,NA,NA,NA,NA,0.19,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","GCTAAGGAAACCCAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","I28K G51V F62* R73L V103Y",5
"lib2","SARS-CoV-2","GCTAAGGCGAAGAGAC",1,6.62,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F70V S113T",2
"lib2","SARS-CoV-2","GCTAAGGGCTCACGAT",7,67.71,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","P96V N157V",2
"lib2","SARS-CoV-2","GCTAAGGGGTAGCTAT",9,107.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y21M S41G Y121T N157H",4
"lib2","SARS-CoV-2","GCTAAGGGTTACTTAA",3,33.77,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51V Y143T",2
"lib2","SARS-CoV-2","GCTAAGTCTTTATTAA",10,50.96,7.16,-3.67,0.28,1.5,1.19,0.02,">1 nonsynonymous","F8D A18V A22M F156K",4
"lib2","SARS-CoV-2","GCTAATAAAAGATGAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","GCTAATAAATCACGCT",5,86.24,9.2,-1.64,0.12,2.53,1.03,0,">1 nonsynonymous","L5A N24G A33N P169A",4
"lib2","SARS-CoV-2","GCTAATAACGAGTACA",2,20.86,9.62,-1.21,0.06,3,1.03,0,"1 nonsynonymous","T170R",1
"lib2","SARS-CoV-2","GCTAATACAAGATTCT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L Y66S I104M D137L",4
"lib2","SARS-CoV-2","GCTAATACATAATATT",8,59.12,6.4,-4.44,0.62,1.5,1.18,0.03,">1 nonsynonymous","L60M V77E D90R S147M",4
"lib2","SARS-CoV-2","GCTAATACTCACTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","GCTAATACTCCTGTTT",4,208.47,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25N P82E F156C Q176P",4
"lib2","SARS-CoV-2","GCTAATACTGATCCAA",10,157.63,9.99,-0.85,0.04,2.7,1.04,0,">1 nonsynonymous","A22L F160P",2
"lib2","SARS-CoV-2","GCTAATAGCCTAAGGT",3,22.11,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","A89T G101L N120H N151S",4
"lib2","SARS-CoV-2","GCTAATAGTTAATTTC",1,28.3,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D59Q F99G N130R",3
"lib2","SARS-CoV-2","GCTAATATTCCGGTGA",6,64.54,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R25G V32G",2
"lib2","SARS-CoV-2","GCTAATCAACAAATAA",2,34.15,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T46Y P54R N64V G172W",4
"lib2","SARS-CoV-2","GCTAATCACTGACTAC",9,283.69,9.4,-1.44,0.04,2.84,1.1,0,">1 nonsynonymous","N120A E154W G174A",3
"lib2","SARS-CoV-2","GCTAATCTCCGAAGTG",4,80.22,8.37,-2.47,0.33,1.5,1.1,0.03,">1 nonsynonymous","D90I K128L N151T",3
"lib2","SARS-CoV-2","GCTAATCTGAATCGAA",6,7.51,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S36Y N107A K132H F185A",4
"lib2","SARS-CoV-2","GCTAATGAAAAACAAA",7,88.49,8.56,-2.27,0.09,2.09,1.09,0,">1 nonsynonymous","V103I G146M",2
"lib2","SARS-CoV-2","GCTAATGAAAGGTTTT",7,29.65,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F47Y I72F P96R R179I",4
"lib2","SARS-CoV-2","GCTAATGACGATAAGT",4,82.73,8.25,-2.59,0.14,2.37,1.05,0.01,">1 nonsynonymous","C6S D97L S113T",3
"lib2","SARS-CoV-2","GCTAATGCATAACTGC",3,17.21,10.7,-0.14,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTAATGGCAAGGCTT",1,36.25,10.77,-0.07,0.05,3,1.01,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","GCTAATGGTGAGGCAA",1,12.64,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","P149L N157I",2
"lib2","SARS-CoV-2","GCTAATGTAATTAGAA",10,102.61,10.87,0.03,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTAATTATGACGATT",8,62.32,10.63,-0.2,0.04,2.88,1.07,0,">1 nonsynonymous","S36T D98R",2
"lib2","SARS-CoV-2","GCTAATTCATTCCCTA",21,2.38,NA,NA,NA,NA,NA,NA,"stop","I80* Q84M R127D V180Q A192S",5
"lib2","SARS-CoV-2","GCTAATTCCTCCCGCT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","A105* N120D E154D T201K",4
"lib2","SARS-CoV-2","GCTAATTGCTGCCTAA",4,65.48,6,-4.84,2,1.5,1.29,0.01,">1 nonsynonymous","I28H G51L P82S A105C I138V",5
"lib2","SARS-CoV-2","GCTAATTGTGTAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D P96H N107S D137W",4
"lib2","SARS-CoV-2","GCTAATTTTTGAAATA",4,35.26,10.74,-0.1,0.08,2.94,1.07,0,">1 nonsynonymous","A14T L122Q",2
"lib2","SARS-CoV-2","GCTACAAAACTTTCCC",13,379.03,10.77,-0.06,0.04,2.95,1.06,0,"1 nonsynonymous","P191R",1
"lib2","SARS-CoV-2","GCTACAAATATAACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14L S19* L60R G117D",4
"lib2","SARS-CoV-2","GCTACAACACCGGTAA",8,45.16,8.97,-1.86,0.21,1.5,1,0.02,">1 nonsynonymous","I80M D90Y",2
"lib2","SARS-CoV-2","GCTACAACGACCAGTT",5,47.93,9.44,-1.4,0.07,2.73,1.22,0,">1 nonsynonymous","C61L Y119T",2
"lib2","SARS-CoV-2","GCTACAACTAAATTCT",5,18.44,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12A K94W V115I",3
"lib2","SARS-CoV-2","GCTACAAGACAGAGGC",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A A81C L95N T100Q N107Y",5
"lib2","SARS-CoV-2","GCTACAAGCTCAAACA",2,26.52,10.83,-0.01,0.08,2.91,1.11,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","GCTACAAGCTGGCTTA",2,89.91,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S36L T100G V115M R127A",4
"lib2","SARS-CoV-2","GCTACACAAGAATGCT",1,48.05,10.28,-0.56,0.04,2.89,1.04,0,">1 nonsynonymous","F47C K114M",2
"lib2","SARS-CoV-2","GCTACACAGAACGACG",1,37.83,10.64,-0.2,0.05,2.92,1.08,0,">1 nonsynonymous","K87T P197K",2
"lib2","SARS-CoV-2","GCTACACATGGGTGCC",19,84.48,9.7,-1.14,0.23,1.5,1.03,0.02,">1 nonsynonymous","D90S A105G Y121K",3
"lib2","SARS-CoV-2","GCTACACTATTCAAGA",16,146.43,8.1,-2.73,0.3,1.5,1.01,0.04,">1 nonsynonymous","W106K N157Q P169S",3
"lib2","SARS-CoV-2","GCTACACTTAATGCGC",1,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36I L57T S69R F160C",4
"lib2","SARS-CoV-2","GCTACAGACGACTTGT",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27D A42Q K56S G155S",4
"lib2","SARS-CoV-2","GCTACAGCGGACCCTT",3,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K S41L",2
"lib2","SARS-CoV-2","GCTACAGCTACATTCG",1,13.54,6,-4.84,1.62,3,1.03,0.01,">1 nonsynonymous","S36C N40W V52H G86S V103S S200K",6
"lib2","SARS-CoV-2","GCTACAGTGGCGGTCA",7,121.32,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N30L N157I Q163C H189P K198N",5
"lib2","SARS-CoV-2","GCTACATAAAACTCGA",3,42.5,9,-1.84,0.16,1.5,1.07,0.01,">1 nonsynonymous","N40V P133H",2
"lib2","SARS-CoV-2","GCTACATAGCCAGGTG",2,87.57,10.76,-0.07,0.03,2.98,1.04,0,">1 nonsynonymous","T148F T201K",2
"lib2","SARS-CoV-2","GCTACATATCAGCCGC",1,11.25,6.46,-4.38,0.86,1.5,1.14,0.08,">1 nonsynonymous","F17S R25D L125I F185C",4
"lib2","SARS-CoV-2","GCTACATATTCTTACG",1,27.82,9.24,-1.59,0.09,2.8,1.19,0,"1 nonsynonymous","Q168C",1
"lib2","SARS-CoV-2","GCTACCAATAATCCAC",11,124.94,6,-4.84,1.15,1.5,1.11,0,">1 nonsynonymous","F44A D112L D137R",3
"lib2","SARS-CoV-2","GCTACCACTGACCGTT",4,93.44,10.76,-0.08,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTACCATATCTCATG",5,63.13,9.37,-1.47,0.21,1.52,1.14,0.02,">1 nonsynonymous","A89H T100S",2
"lib2","SARS-CoV-2","GCTACCATGAATTAGA",6,141.27,9.48,-1.36,0.07,2.67,1.1,0,">1 nonsynonymous","V65A D98N Q176H",3
"lib2","SARS-CoV-2","GCTACCCAAAGAAAGT",1,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D I104N V180E",3
"lib2","SARS-CoV-2","GCTACCCAATTAGAGT",14,79.11,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F47V G86S N107G Q144V",4
"lib2","SARS-CoV-2","GCTACCCACCTAGTCG",4,131.22,10.43,-0.4,0.05,2.96,1.03,0,">1 nonsynonymous","K87M S129A",2
"lib2","SARS-CoV-2","GCTACCCATACAGATG",15,103.87,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S113L N130F T148W",3
"lib2","SARS-CoV-2","GCTACCCCTTACGCAT",7,65.83,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V77Q Y119R R136D T148N G166S",5
"lib2","SARS-CoV-2","GCTACCCTTTTATAGT",6,52.72,8.71,-2.13,0.08,2.19,1.11,0,">1 nonsynonymous","F167L T201Q",2
"lib2","SARS-CoV-2","GCTACCGAGCAGACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L D98A P161K",3
"lib2","SARS-CoV-2","GCTACCGATTTGCGAT",1,27.41,10.05,-0.79,0.1,2.75,1.04,0,">1 nonsynonymous","V32L V37Y E135M",3
"lib2","SARS-CoV-2","GCTACCGTAGGGCACA",9,71.87,10.22,-0.62,0.06,2.72,1.03,0,">1 nonsynonymous","V37L R136Y",2
"lib2","SARS-CoV-2","GCTACCGTGATTCTTA",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143L V153Y L183P",3
"lib2","SARS-CoV-2","GCTACCTAAGCATCCA",3,16.91,10.11,-0.73,0.08,2.73,1.04,0,">1 nonsynonymous","K48R S53Q W106R",3
"lib2","SARS-CoV-2","GCTACCTTGGTACACG",6,3.67,NA,NA,NA,NA,NA,NA,"stop","N1* A14S D112W N151K",4
"lib2","SARS-CoV-2","GCTACCTTTTGATATG",4,45.8,9.17,-1.67,0.09,2.67,1.21,0,">1 nonsynonymous","S129L Q168L",2
"lib2","SARS-CoV-2","GCTACGAGTCACATTG",3,27.65,10.52,-0.32,0.08,2.91,1.07,0,"1 nonsynonymous","Y123W",1
"lib2","SARS-CoV-2","GCTACGATGAAGCAAA",4,2.16,NA,NA,NA,NA,NA,NA,"stop","F17G Y35N D90* G152S C158G K199M",6
"lib2","SARS-CoV-2","GCTACGATGCACTGTA",15,103.87,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K56L R73A N157Y P169S R179G H189Q",6
"lib2","SARS-CoV-2","GCTACGCCGAAGATAT",7,129.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K132H C150W Q176F",3
"lib2","SARS-CoV-2","GCTACGCTGGACTAAG",4,98.7,10.11,-0.73,0.09,2.55,1.04,0,">1 nonsynonymous","P7Q V37R V71L N110T",4
"lib2","SARS-CoV-2","GCTACGGGATTCTTAT",7,23.42,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K94A I104A Y121S",3
"lib2","SARS-CoV-2","GCTACGGTCATAATTA",12,58.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F70K G83M",2
"lib2","SARS-CoV-2","GCTACGTATCCCCTCC",4,37.43,10.87,0.03,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTACGTTCTTATAAA",1,14.82,9.64,-1.19,0.08,2.84,1.11,0,">1 nonsynonymous","C61V Q84V Y121M",3
"lib2","SARS-CoV-2","GCTACTAACAGAAGGT",21,287.75,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4D N58T S139R Y178K",4
"lib2","SARS-CoV-2","GCTACTAACCTAGATC",7,71.01,6.15,-4.69,1.13,1.5,1.31,0.04,">1 nonsynonymous","W106N K132R E154M",3
"lib2","SARS-CoV-2","GCTACTACATGAAACT",2,55.26,9.66,-1.18,0.11,2.04,1.13,0.01,">1 nonsynonymous","N13A N24Y",2
"lib2","SARS-CoV-2","GCTACTACCATAGAAG",4,103.23,8.68,-2.16,0.05,2.03,1.12,0,">1 nonsynonymous","Y35R C61W D90S Y123R",4
"lib2","SARS-CoV-2","GCTACTACTAAAATCT",5,1.47,NA,NA,NA,NA,NA,NA,"stop","A14V V37S D98*",3
"lib2","SARS-CoV-2","GCTACTAGAGAGTTAA",2,5.81,8.28,-2.55,0.19,2.55,1.04,0.01,">1 nonsynonymous","G9R N13S I88G D98E E135T Y175L",6
"lib2","SARS-CoV-2","GCTACTAGTAAAATAA",1,28.4,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G9T V77G Y121F I138D A192G",5
"lib2","SARS-CoV-2","GCTACTCAGGATGTAC",8,133.36,10.54,-0.29,0.03,2.89,1.09,0,">1 nonsynonymous","N40A N58M",2
"lib2","SARS-CoV-2","GCTACTCGTGATCATG",3,44.64,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8L Y21R D137S",3
"lib2","SARS-CoV-2","GCTACTCTTTACAGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","GCTACTGAAAATCTAG",3,11.8,6,-4.84,2,3,1.07,0,">1 nonsynonymous","L5V S41G I88L L162E P169I",5
"lib2","SARS-CoV-2","GCTACTGGAACATTTA",3,31.78,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","F167S",1
"lib2","SARS-CoV-2","GCTACTGGCCCGATAA",7,86.23,9.66,-1.17,0.08,2,1.04,0,"1 nonsynonymous","Q79V",1
"lib2","SARS-CoV-2","GCTACTGTGGAAATCT",4,82.16,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25W G74F Y91L W106F E141G K199N",6
"lib2","SARS-CoV-2","GCTACTTGACAAAAGG",13,203,10.58,-0.25,0.03,2.92,1.08,0,">1 nonsynonymous","Y50F C61R T148L",3
"lib2","SARS-CoV-2","GCTACTTGACTATCGT",1,28.57,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G51F Y143R L162S G174W K198P",5
"lib2","SARS-CoV-2","GCTACTTGGTCTGATG",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A N120P P133S P177F",4
"lib2","SARS-CoV-2","GCTACTTTACACCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37* D98* W106T C158T",4
"lib2","SARS-CoV-2","GCTACTTTTAACAAAG",5,77.85,8.51,-2.33,0.1,2.06,1.09,0,">1 nonsynonymous","Y165Q T201I",2
"lib2","SARS-CoV-2","GCTAGAAAAGTAGCAC",1,30.16,10.88,0.04,0.08,2.95,1.08,0,">1 nonsynonymous","V37E T201C",2
"lib2","SARS-CoV-2","GCTAGAAGATAATTGA",9,57.68,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G101R N118S S139N",3
"lib2","SARS-CoV-2","GCTAGAATTTGGATCT",3,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M Y91K Y121K F160A",4
"lib2","SARS-CoV-2","GCTAGACATATGGTTG",6,98.54,8.49,-2.35,0.19,2.59,1.04,0.01,"1 nonsynonymous","S113E",1
"lib2","SARS-CoV-2","GCTAGACCAATTCCTT",7,1.1,NA,NA,NA,NA,NA,NA,"stop","S69* W106E E141I",3
"lib2","SARS-CoV-2","GCTAGACCACATTTTA",18,216.51,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","N92F",1
"lib2","SARS-CoV-2","GCTAGACTACGTGCTT",1,28.84,10.77,-0.07,0.05,2.95,1.07,0,">1 nonsynonymous","N1V T63Q",2
"lib2","SARS-CoV-2","GCTAGACTATAATACA",10,66.53,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V37P D90G V103S",3
"lib2","SARS-CoV-2","GCTAGACTGGCCCAAG",5,3.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G V37K W106M",3
"lib2","SARS-CoV-2","GCTAGAGCAATTAGCC",1,20.08,9.01,-1.83,0.12,1.94,1.17,0.01,">1 nonsynonymous","T15G N120S K132T S139R",4
"lib2","SARS-CoV-2","GCTAGAGCTTAAGAGT",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9H K56P D90G A190Y K199S",5
"lib2","SARS-CoV-2","GCTAGAGTATCCAACA",3,0.8,NA,NA,NA,NA,NA,NA,"stop","G74M D90* I104E S147F",4
"lib2","SARS-CoV-2","GCTAGATAAATTCTAG",1,5.19,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","T85A N92Q D97R Y119Q D137H",5
"lib2","SARS-CoV-2","GCTAGATAACAAATTT",12,82.6,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","W23T P54W L125P E186V",4
"lib2","SARS-CoV-2","GCTAGATATAATTGAC",1,7.66,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","P82D",1
"lib2","SARS-CoV-2","GCTAGATATTTTACCA",13,151.12,10.35,-0.48,0.03,2.83,1.06,0,">1 nonsynonymous","K87R Y123S E141R",3
"lib2","SARS-CoV-2","GCTAGATGACTTTATC",2,10.08,6,-4.84,2,1.75,1.18,0.06,">1 nonsynonymous","F62S I80A F160R",3
"lib2","SARS-CoV-2","GCTAGATTATATAATC",8,63.19,6.33,-4.5,0.42,1.5,1.12,0.01,">1 nonsynonymous","S147N F167S",2
"lib2","SARS-CoV-2","GCTAGATTGACAGGGC",4,34.7,7.12,-3.71,0.28,1.5,1.11,0.02,">1 nonsynonymous","G51V N64L Y143L",3
"lib2","SARS-CoV-2","GCTAGATTGGCTACAT",1,29.71,10.83,-0.01,0.08,2.86,1.14,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","GCTAGCAAAACCCTCA",1,22.87,10.07,-0.76,0.08,2.89,1.03,0,">1 nonsynonymous","I138W F156V",2
"lib2","SARS-CoV-2","GCTAGCAATTCTTTTT",3,51.43,8.3,-2.54,0.07,1.85,1.08,0,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","GCTAGCAATTGGTTGT",7,96.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S113Q G155V",2
"lib2","SARS-CoV-2","GCTAGCATACAATCCT",8,83.65,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9S K56T G83N R124H I138L",5
"lib2","SARS-CoV-2","GCTAGCATACATTATG",3,41.13,9.1,-1.74,0.24,1.5,1.03,0.02,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","GCTAGCCGCTATAACC",12,133.3,8.41,-2.43,0.11,1.87,1.11,0,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","GCTAGCCTCTCACGAG",7,87.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11W D34S R127D F160P Q176S",5
"lib2","SARS-CoV-2","GCTAGCGTTGGTTAAT",6,22.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50T F99S R124E",3
"lib2","SARS-CoV-2","GCTAGGAAATCGCAAA",15,105.55,9.2,-1.64,0.09,1.8,1.08,0,">1 nonsynonymous","C49L D90N",2
"lib2","SARS-CoV-2","GCTAGGAGTTATACAC",2,0.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72S D90Y L122M Q163T",4
"lib2","SARS-CoV-2","GCTAGGCGCCGTGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C A33V K56C S113E Y123Q P161V",6
"lib2","SARS-CoV-2","GCTAGGCTCCTGCCAA",1,7.05,6,-4.84,1.1,3,1.18,0.02,">1 nonsynonymous","S45R F99K",2
"lib2","SARS-CoV-2","GCTAGGGATTTCGTTT",6,37.66,6.36,-4.48,0.43,1.5,1.21,0.01,">1 nonsynonymous","S53G G83N N92M F156L F160S",5
"lib2","SARS-CoV-2","GCTAGGTAAATTGATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","GCTAGGTGTAAATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Y A81T F99T N107S G155D",5
"lib2","SARS-CoV-2","GCTAGTACCTAGGGTA",2,133.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","R73E E141R Y178A",3
"lib2","SARS-CoV-2","GCTAGTAGTAGTCTAT",2,36.21,10.52,-0.32,0.06,2.97,1.05,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","GCTAGTATATGGGAAA",10,2.91,NA,NA,NA,NA,NA,NA,"stop","F12V T55I C61K S69W Q84R D90G T148A F156*",8
"lib2","SARS-CoV-2","GCTAGTATGGTACCTA",7,126.51,6.17,-4.67,0.37,1.81,1.16,0,">1 nonsynonymous","K87S K128N G146T G152P",4
"lib2","SARS-CoV-2","GCTAGTATTAATGATA",2,5.95,6.32,-4.51,1.14,3,1.27,0.02,">1 nonsynonymous","C6V A33N N64D L95R T170S",5
"lib2","SARS-CoV-2","GCTAGTCACATAACAT",15,167.38,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","R25P R124H N157H R179C",4
"lib2","SARS-CoV-2","GCTAGTCGCTAAGATG",7,34.43,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","S41C Y50L C102G R124V",4
"lib2","SARS-CoV-2","GCTAGTGAGCTAACGA",2,42.08,9.15,-1.69,0.09,2.54,1.09,0.01,">1 nonsynonymous","G51Y G174E T201R",3
"lib2","SARS-CoV-2","GCTAGTGTATGGTTAG",1,8.55,6.71,-4.12,0.87,3,1.14,0.03,">1 nonsynonymous","T3M T63P V77Q P96A F156S",5
"lib2","SARS-CoV-2","GCTAGTTAAAAAGTTG",5,44.47,8.89,-1.94,0.16,1.5,1.04,0.01,">1 nonsynonymous","L60S I88T",2
"lib2","SARS-CoV-2","GCTAGTTCATAACAAT",13,166.84,8.27,-2.57,0.14,2.07,1.06,0.01,">1 nonsynonymous","G51M G117V",2
"lib2","SARS-CoV-2","GCTATAAAAATTGGCG",25,284.93,9.85,-0.99,0.06,2.21,1.04,0,">1 nonsynonymous","A18L S139D",2
"lib2","SARS-CoV-2","GCTATAAAACACTATT",9,56.92,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L60D D68L P82F V173N T193I",5
"lib2","SARS-CoV-2","GCTATAAACCGATCCC",4,135.76,7.18,-3.66,0.29,1.5,1.08,0.02,">1 nonsynonymous","S19A T55F K94S",3
"lib2","SARS-CoV-2","GCTATAAATAGCCTCC",2,23.98,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","P7L N40Q R127M N157E",4
"lib2","SARS-CoV-2","GCTATAAGCACAGACG",5,41.65,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V103K G155H Q176L",3
"lib2","SARS-CoV-2","GCTATAATCATGACTG",6,20.47,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","C6S N107L E141G T148E C158F",5
"lib2","SARS-CoV-2","GCTATACAAATTACAG",2,54.89,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N64I N92V R124W S184V",4
"lib2","SARS-CoV-2","GCTATACAAATTGTAA",6,0,NA,NA,NA,NA,NA,NA,"stop","N24* A42P K48* V77K G152T",5
"lib2","SARS-CoV-2","GCTATACAGCATGAAT",14,39.06,6,-4.84,2,3,1.32,0,">1 nonsynonymous","A33L F47D V103E S139C V182A",5
"lib2","SARS-CoV-2","GCTATACCAATGATAA",6,88.86,9.66,-1.18,0.04,2.95,1.03,0,"1 nonsynonymous","S113T",1
"lib2","SARS-CoV-2","GCTATACGGATACACG",12,52.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40H A81R V181S",3
"lib2","SARS-CoV-2","GCTATACTAAAAGAAA",8,66.72,8.1,-2.74,0.11,2.61,1.06,0,">1 nonsynonymous","C61T S113W",2
"lib2","SARS-CoV-2","GCTATACTATAACTAC",5,51.39,8.22,-2.62,0.09,1.87,1.14,0,">1 nonsynonymous","K128A G146L",2
"lib2","SARS-CoV-2","GCTATACTTGACTGAT",4,55.65,6.15,-4.69,0.92,1.5,1.18,0.02,">1 nonsynonymous","G9F R25T S45I G74F",4
"lib2","SARS-CoV-2","GCTATAGCACGTTAAG",6,43.16,10.71,-0.13,0.07,2.91,1.08,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","GCTATAGGTAGCCAAA",3,15.3,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S43E V52S C158N Y175C S184F",5
"lib2","SARS-CoV-2","GCTATATAAAAAGGCG",8,114.97,10.72,-0.11,0.04,2.92,1.09,0,">1 nonsynonymous","I138T V153S",2
"lib2","SARS-CoV-2","GCTATATACTGGGGCT",5,56.13,10.68,-0.15,0.04,2.93,1.07,0,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","GCTATATAGTAAGTTT",11,122.73,9.73,-1.11,0.09,2.12,1.09,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GCTATATAGTATGCAA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","S147* P191G",2
"lib2","SARS-CoV-2","GCTATATCACTTTGGT",1,23.2,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","C6D C49T T55S K128C G166P",5
"lib2","SARS-CoV-2","GCTATATCATGAATGA",4,145.89,10.84,0.01,0.06,2.91,1.09,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","GCTATATCTCTTAATG",1,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143N K198L",2
"lib2","SARS-CoV-2","GCTATATGACAAAAGG",5,25.14,10.87,0.04,0.09,3,1,0,"1 nonsynonymous","V37M",1
"lib2","SARS-CoV-2","GCTATATGAGAATCGT",9,121.27,9.19,-1.64,0.04,2.89,1.12,0,"1 nonsynonymous","F156E",1
"lib2","SARS-CoV-2","GCTATATGTAAACTAT",5,35.63,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12A D68G V77A T100L E154F",5
"lib2","SARS-CoV-2","GCTATATTACCCCGAA",3,59.6,10.44,-0.39,0.11,2.66,1.21,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","GCTATCAAAATCGAAC",2,17.74,10.15,-0.69,0.05,2.99,1,0,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","GCTATCAAAGATTTGC",3,58.73,9.26,-1.58,0.04,2.95,1.06,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","GCTATCAAGTCAAAAT",2,7.37,6.47,-4.36,1,3,1.27,0.02,">1 nonsynonymous","S45D F99S",2
"lib2","SARS-CoV-2","GCTATCAGAAGGATCT",7,22.54,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","E135D G146P F156H",3
"lib2","SARS-CoV-2","GCTATCAGCACCTCAC",1,7.46,6,-4.84,2,3,1.02,0,">1 nonsynonymous","G9T G152I P161F",3
"lib2","SARS-CoV-2","GCTATCCGCAGACTCC",6,225.13,10.85,0.02,0.04,2.91,1.09,0,">1 nonsynonymous","L5A E141H",2
"lib2","SARS-CoV-2","GCTATCCGTAATGTGA",15,220.73,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F12E C61Y D90F R136K G152L S164R Q176L",7
"lib2","SARS-CoV-2","GCTATCCTCTCTTAAG",4,67.96,8.36,-2.47,0.16,1.64,1.18,0.01,">1 nonsynonymous","T55P D112V",2
"lib2","SARS-CoV-2","GCTATCGAGTTGCTTG",4,12.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C102R D112I Y178S E186T",4
"lib2","SARS-CoV-2","GCTATCGCACTATAGA",8,46.16,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S19F S45I G117P P197K",4
"lib2","SARS-CoV-2","GCTATCGGGATTCCAG",2,15.33,10.31,-0.53,0.06,2.9,1.02,0,">1 nonsynonymous","S36R L57V",2
"lib2","SARS-CoV-2","GCTATCTATTCCAACG",10,182.49,9.26,-1.57,0.07,2.44,1.1,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","GCTATCTGTGATCAAC",6,111.96,10.84,0.01,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTATCTTCACGAGAC",3,37.96,6,-4.84,2,3,1.24,0,">1 nonsynonymous","N40R C102K Y121P",3
"lib2","SARS-CoV-2","GCTATGAAAGTCAAAT",12,92.08,9.5,-1.33,0.07,1.7,1.04,0,">1 nonsynonymous","G51T R127K",2
"lib2","SARS-CoV-2","GCTATGAACAAATCGA",1,31.89,10.59,-0.25,0.05,3,1,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","GCTATGACGCATTCCC",1,12.17,10.4,-0.43,0.15,2.06,1.08,0.01,">1 nonsynonymous","Y39T D90N F99M",3
"lib2","SARS-CoV-2","GCTATGACGCCTCTTA",9,143.57,10.14,-0.69,0.04,2.69,1.07,0,">1 nonsynonymous","L5R P133V I138V K199N",4
"lib2","SARS-CoV-2","GCTATGACGCTCACAA",2,33.14,6.27,-4.57,0.97,1.5,1.25,0.04,">1 nonsynonymous","L57P I88V A105T S139T",4
"lib2","SARS-CoV-2","GCTATGAGCCCCCTGC",7,41.97,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G101E S108D G146I",3
"lib2","SARS-CoV-2","GCTATGATAAGTTTCT",3,105.54,10.2,-0.64,0.06,2.83,1.08,0,"1 nonsynonymous","Q176M",1
"lib2","SARS-CoV-2","GCTATGATAATAGCTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","GCTATGCATTCGGGGG",3,30.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T S53F P82A N120Q",4
"lib2","SARS-CoV-2","GCTATGCGCAAACAGT",1,5.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67L R73M N151F F160V K199M",5
"lib2","SARS-CoV-2","GCTATGCTTTTAAGAC",2,29.14,10.39,-0.44,0.13,2.92,1.12,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCTATGGTCTCCTTAA",11,139.66,10.38,-0.45,0.03,2.86,1.06,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","GCTATGGTTTTATTGC",10,76.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A105K C158V Y165R T201A",4
"lib2","SARS-CoV-2","GCTATGTCACAACTGA",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E A18M D59C",3
"lib2","SARS-CoV-2","GCTATTAAACGGGCAT",2,23.84,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G9M C49Y Y123P E141A",4
"lib2","SARS-CoV-2","GCTATTAAGCTACGCA",7,123.52,9.97,-0.86,0.06,2.66,1.06,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GCTATTAATATCATAT",4,56.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N4C N40G N92L N118P",4
"lib2","SARS-CoV-2","GCTATTACACAATAAA",3,37.14,6.96,-3.88,0.36,1.5,1.1,0.04,">1 nonsynonymous","N4H N13L Q176S",3
"lib2","SARS-CoV-2","GCTATTACACAGAGAC",2,14.48,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","C49S R127N G155T F160W",4
"lib2","SARS-CoV-2","GCTATTATCGACAACA",2,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N L95V E141K Y165S",4
"lib2","SARS-CoV-2","GCTATTCAGCATACTG",13,242.18,10.65,-0.18,0.03,2.9,1.09,0,">1 nonsynonymous","D97S P149R",2
"lib2","SARS-CoV-2","GCTATTCATACATCGA",1,37.62,10.85,0.01,0.07,2.97,1.04,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","GCTATTCATTAACAAA",6,23.55,8.02,-2.82,0.33,1.5,1,0.07,">1 nonsynonymous","L38R P82L L131V P149F",4
"lib2","SARS-CoV-2","GCTATTCCGACAAACA",7,193.09,10.59,-0.25,0.02,2.98,1.04,0,">1 nonsynonymous","L5G N58S",2
"lib2","SARS-CoV-2","GCTATTCCTGTTGTCC",9,80.77,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","L5V I88G",2
"lib2","SARS-CoV-2","GCTATTCTAGAGTCCG",8,11.12,NA,NA,NA,NA,NA,NA,"stop","I104M S113*",2
"lib2","SARS-CoV-2","GCTATTCTTAAACAAC",1,8.63,10.32,-0.51,0.08,3,1.03,0,">1 nonsynonymous","D59L A190I",2
"lib2","SARS-CoV-2","GCTATTCTTTTTAAAT",10,583.12,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","GCTATTGAAATGTATG",10,31.54,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D34P P82L E141L",3
"lib2","SARS-CoV-2","GCTATTGAATTAAATA",21,211.51,9.6,-1.24,0.04,1.94,1.06,0,">1 nonsynonymous","Y35T F134K",2
"lib2","SARS-CoV-2","GCTATTGCCTCGACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* T55V V103S V115N",4
"lib2","SARS-CoV-2","GCTATTGGCACACACA",7,0.69,NA,NA,NA,NA,NA,NA,"stop","N58H V71* T148I",3
"lib2","SARS-CoV-2","GCTATTGTAGTTTCTA",3,52.23,10.61,-0.22,0.04,2.91,1.07,0,">1 nonsynonymous","T15Q S43L C61R K132L",4
"lib2","SARS-CoV-2","GCTATTGTCCAATCAC",12,58.1,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","L5V E10S A33L T55I F70W",5
"lib2","SARS-CoV-2","GCTATTTAAAATAAAA",5,71.48,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L5A F70V P82R L122H T201D",5
"lib2","SARS-CoV-2","GCTATTTAGACTTAAA",9,2.32,NA,NA,NA,NA,NA,NA,"stop","I104S R124C G166*",3
"lib2","SARS-CoV-2","GCTATTTCAAAACTCT",15,221.37,9.47,-1.37,0.04,2.91,1.07,0,">1 nonsynonymous","N1I V77L Y119F",3
"lib2","SARS-CoV-2","GCTATTTCATACTTTG",1,14.3,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","S41R K56V Y159L Y165H",4
"lib2","SARS-CoV-2","GCTATTTCATTGAACA",5,46.95,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","W23V K128N P161M",3
"lib2","SARS-CoV-2","GCTATTTGTATTAATT",1,42.7,10.69,-0.14,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCAAAACATAAAGT",3,58.54,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y93L E141L G146W Q176L",4
"lib2","SARS-CoV-2","GCTCAAAGATGACTAA",2,48.87,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D112P P133Y",2
"lib2","SARS-CoV-2","GCTCAAATAAACTCTC",4,17.76,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V11Q L60D L95T",3
"lib2","SARS-CoV-2","GCTCAAATTTGAGGTA",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104N E141S",2
"lib2","SARS-CoV-2","GCTCAACATACGGAGT",20,0.43,NA,NA,NA,NA,NA,NA,"stop","Y39C I104* P149L",3
"lib2","SARS-CoV-2","GCTCAACCGTACGCCG",9,115.93,10.39,-0.44,0.05,2.91,1.09,0,"1 nonsynonymous","Y35P",1
"lib2","SARS-CoV-2","GCTCAACCTACATACA",17,62.53,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27I V71E N92D",3
"lib2","SARS-CoV-2","GCTCAACTAAGTCGAT",10,0.02,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","GCTCAACTGGCTCGGT",4,93.04,10.26,-0.58,0.05,2.91,1.04,0,">1 nonsynonymous","L5T C31I",2
"lib2","SARS-CoV-2","GCTCAACTGTCGTAGG",7,1.69,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib2","SARS-CoV-2","GCTCAACTTTCAAATT",11,0.91,NA,NA,NA,NA,NA,NA,"stop","N30* P96H",2
"lib2","SARS-CoV-2","GCTCAAGGAATCAATG",3,12.38,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S19R K26V G146C S184F",4
"lib2","SARS-CoV-2","GCTCAAGTCGTATGTA",1,9.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123K",1
"lib2","SARS-CoV-2","GCTCAAGTTCCTTCGT",1,22.09,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","V32M N92L T100D",3
"lib2","SARS-CoV-2","GCTCAATAATTAAACG",3,13.93,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F44R N92Y Q168L",3
"lib2","SARS-CoV-2","GCTCAATATGTACAAA",11,170.71,10.9,0.06,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCAATCAAAACGAA",2,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R A105P N118F",3
"lib2","SARS-CoV-2","GCTCACAATAATGGGA",1,21.92,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G9L C61L Y143F T170G P177T",5
"lib2","SARS-CoV-2","GCTCACACAGAAGCCA",11,256.28,10.54,-0.29,0.03,2.91,1.07,0,"1 nonsynonymous","A89T",1
"lib2","SARS-CoV-2","GCTCACAGATTCCATA",11,134.74,10.84,0,0.05,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTCACATACATCCAT",2,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34W K128R E135K",3
"lib2","SARS-CoV-2","GCTCACCAGAATAGGA",5,32.97,8.6,-2.24,0.25,1.5,1.22,0.04,">1 nonsynonymous","C61Q D97N W106G",3
"lib2","SARS-CoV-2","GCTCACCAGAGCAATG",3,53.18,10.1,-0.74,0.08,2.62,1.07,0,">1 nonsynonymous","N13L E141S",2
"lib2","SARS-CoV-2","GCTCACCAGAGTTTTG",6,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H F99S T148I F185C",4
"lib2","SARS-CoV-2","GCTCACCGCACGCACC",2,45.28,10.61,-0.23,0.07,2.89,1.05,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","GCTCACCGGTAACGTC",5,59.45,10.9,0.06,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCACCTGGATGTAT",6,104.24,10.06,-0.78,0.03,2.88,1.05,0,">1 nonsynonymous","G9R A42R T55S I72L N120Y T148M",6
"lib2","SARS-CoV-2","GCTCACTAATTGTATG",7,165.44,9.66,-1.18,0.03,2.94,1.08,0,">1 nonsynonymous","F126C H189D",2
"lib2","SARS-CoV-2","GCTCACTAGACAGGCT",13,56.36,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","Q84H L131R",2
"lib2","SARS-CoV-2","GCTCACTAGCGCTGTC",4,0.17,NA,NA,NA,NA,NA,NA,"stop","E10V L95I R127*",3
"lib2","SARS-CoV-2","GCTCACTCCCTCATAA",6,51.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E154P R179N",2
"lib2","SARS-CoV-2","GCTCACTTAGATATAA",7,67.15,10.72,-0.11,0.02,2.93,1.09,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","GCTCAGAAAAGGTCCA",4,27.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y21R T100D",2
"lib2","SARS-CoV-2","GCTCAGAACACGACTT",1,16.45,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2T T55H V65T T100P L122D",5
"lib2","SARS-CoV-2","GCTCAGCAAAGACACC",10,95.93,10.5,-0.34,0.05,2.89,1.09,0,">1 nonsynonymous","D98L N151K",2
"lib2","SARS-CoV-2","GCTCAGCAAATTGAAA",1,13.52,10.92,0.08,0.1,2.75,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCAGCAGTGTGTTA",2,19.52,9.29,-1.55,0.17,1.91,1.03,0.01,"1 nonsynonymous","I28D",1
"lib2","SARS-CoV-2","GCTCAGCCAATCTTAG",17,4.34,NA,NA,NA,NA,NA,NA,"stop","G9D S45L P161*",3
"lib2","SARS-CoV-2","GCTCAGCTATTCACGT",4,32.18,10.75,-0.09,0.08,2.84,1.16,0,">1 nonsynonymous","C61K T201P",2
"lib2","SARS-CoV-2","GCTCAGGCAAAAGAAA",1,23.36,6.33,-4.5,0.89,1.5,1.16,0.05,">1 nonsynonymous","L5R E10L C61L G86N T148R",5
"lib2","SARS-CoV-2","GCTCAGGCAACCGTCA",11,183.68,10.79,-0.04,0.07,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTCAGGCGGATACTT",9,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K T3M N13R R27A S41Q P96G P133M",7
"lib2","SARS-CoV-2","GCTCAGGCGGGAGTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84N Q168*",2
"lib2","SARS-CoV-2","GCTCAGGTATTGTACA",2,61.68,10.04,-0.79,0.13,2.09,1.06,0.01,">1 nonsynonymous","P133R P149A",2
"lib2","SARS-CoV-2","GCTCAGTACCACACCT",15,24.7,9.63,-1.21,0.08,1.88,1.1,0,">1 nonsynonymous","G9V D34I K56Y Q84T",4
"lib2","SARS-CoV-2","GCTCAGTCGAGAAGCG",5,64.48,10.22,-0.61,0.04,2.88,1.04,0,">1 nonsynonymous","A81K T85R S147L",3
"lib2","SARS-CoV-2","GCTCAGTTATTACAGA",3,29.53,10.87,0.04,0.05,3,1.01,0,"1 nonsynonymous","F62C",1
"lib2","SARS-CoV-2","GCTCATAAGTATTAAA",1,1.57,NA,NA,NA,NA,NA,NA,"stop","F62K I138P Y143*",3
"lib2","SARS-CoV-2","GCTCATAATGAAACAG",13,103.66,10.84,0,0.04,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCATACGAAATACG",7,22.74,6.06,-4.78,1.09,1.5,1.15,0.03,">1 nonsynonymous","Q84H F99N Y123F",3
"lib2","SARS-CoV-2","GCTCATACGAACGCAA",3,100.7,10.77,-0.07,0.04,2.9,1.11,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","GCTCATACTACGGGTG",2,14.85,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","P7S T55S L60N E154C T170M Y178I",6
"lib2","SARS-CoV-2","GCTCATACTTGCTGGC",3,10.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S53H D59Y K94L R127G P133R",5
"lib2","SARS-CoV-2","GCTCATAGAATGTTTT",17,93.06,8.69,-2.15,0.16,1.5,1.18,0.01,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","GCTCATATATCTGATT",6,225.19,10.67,-0.17,0.03,2.97,1.05,0,">1 nonsynonymous","T55K C61T K114L",3
"lib2","SARS-CoV-2","GCTCATCAGAAGCTTT",2,16.88,10.91,0.08,0.11,2.99,1.01,0,"1 nonsynonymous","V65M",1
"lib2","SARS-CoV-2","GCTCATCAGTTACTCC",12,236.96,10.77,-0.06,0.04,2.95,1.06,0,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","GCTCATCGCCATAACG",2,47.47,8.89,-1.94,0.05,3,1.02,0,">1 nonsynonymous","T100L N118P S129A",3
"lib2","SARS-CoV-2","GCTCATCTATAATTTT",2,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A42E C49Y I88G T100K D112F D137K",7
"lib2","SARS-CoV-2","GCTCATGAAGCATACA",4,0.11,NA,NA,NA,NA,NA,NA,"stop","F17I I88* F134T G174T",4
"lib2","SARS-CoV-2","GCTCATGCATAGACAT",2,5.56,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","I2D F8R N24P T148S",4
"lib2","SARS-CoV-2","GCTCATGTACAAAGAA",2,0.7,NA,NA,NA,NA,NA,NA,"stop","D68N I138Q S147*",3
"lib2","SARS-CoV-2","GCTCATGTCTTCGGGC",3,21.78,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","GCTCATTAACCTCTAG",2,7.99,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5N I80A N107L Y119H F126K",5
"lib2","SARS-CoV-2","GCTCATTGAGTCTACG",14,138.65,10.78,-0.05,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCCAAATACTAACG",11,141.55,9.59,-1.24,0.06,2.05,1.07,0,">1 nonsynonymous","S19K T55K L122Y A192L",4
"lib2","SARS-CoV-2","GCTCCAAGTATGTTAA",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L D90Y D98H V153Y Q176V",5
"lib2","SARS-CoV-2","GCTCCAAGTGCCTACC",1,38.51,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38C L57T T85I S139V",4
"lib2","SARS-CoV-2","GCTCCAATGCTAAAAT",1,76.59,9.87,-0.96,0.06,2.51,1.09,0,">1 nonsynonymous","S45L S129Q I138C",3
"lib2","SARS-CoV-2","GCTCCACAGGCAAACA",8,3.85,NA,NA,NA,NA,NA,NA,"stop","E10* V37D T55S A105N C150R V182F",6
"lib2","SARS-CoV-2","GCTCCACCATCCACCA",3,30.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A105I D112S Y119H K199I",4
"lib2","SARS-CoV-2","GCTCCAGAAATCAGAA",5,23.72,9.67,-1.17,0.19,2.22,1.3,0.01,">1 nonsynonymous","D34T C61A G83S V173N H189Q",5
"lib2","SARS-CoV-2","GCTCCAGCTAGCACAC",4,34.85,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R25K D90S N107I P197A",4
"lib2","SARS-CoV-2","GCTCCAGCTATGACGC",13,161.34,10.39,-0.45,0.03,2.89,1.06,0,">1 nonsynonymous","E10P S129N P149V",3
"lib2","SARS-CoV-2","GCTCCAGCTCAGACGT",7,93.62,9.85,-0.99,0.05,2.9,1.07,0,">1 nonsynonymous","T55D I142S",2
"lib2","SARS-CoV-2","GCTCCAGTACAAAACT",8,314.28,9.55,-1.29,0.06,1.84,1.08,0,">1 nonsynonymous","F44L D112I",2
"lib2","SARS-CoV-2","GCTCCAGTCAATTACA",5,94.75,10.16,-0.67,0.05,2.85,1.06,0,"1 nonsynonymous","C31V",1
"lib2","SARS-CoV-2","GCTCCATATATAGTGC",3,36.94,9.63,-1.21,0.12,2.07,1.04,0.01,">1 nonsynonymous","N58G V115F R136V",3
"lib2","SARS-CoV-2","GCTCCATCCAAAACCT",7,96.94,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G86P Y93A V153M H189F",4
"lib2","SARS-CoV-2","GCTCCATTGAAACGGA",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E W23K",2
"lib2","SARS-CoV-2","GCTCCATTGTAATAAG",9,109.87,10.57,-0.27,0.03,2.94,1.05,0,">1 nonsynonymous","A14R A33V",2
"lib2","SARS-CoV-2","GCTCCATTGTCCCCGA",4,123.58,10.71,-0.13,0.03,2.98,1.01,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","GCTCCCAAATTGAGTA",6,28.24,6.18,-4.66,0.91,1.5,1.24,0.02,">1 nonsynonymous","A33K S45L P54A S129Y G174W",5
"lib2","SARS-CoV-2","GCTCCCAAGTCAAACT",9,40.87,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G101F N130L F167L",3
"lib2","SARS-CoV-2","GCTCCCACCTATAAAC",9,98.86,8.58,-2.25,0.17,1.7,1.11,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","GCTCCCAGGTCCAGTG",6,118.55,8.44,-2.39,0.08,2.7,1.08,0,">1 nonsynonymous","D59P N120P",2
"lib2","SARS-CoV-2","GCTCCCAGGTTAGTAA",1,2.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","GCTCCCATCGTCTCCT",1,33.88,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9F N130T I142E P161S V173S",5
"lib2","SARS-CoV-2","GCTCCCATCTAGACTC",8,20.89,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V103P N118V L125E T170L",4
"lib2","SARS-CoV-2","GCTCCCCCAAGAATTT",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L Q84H C102H R127C",4
"lib2","SARS-CoV-2","GCTCCCTGACAACTAT",1,117.59,10.2,-0.64,0.04,2.82,1.02,0,">1 nonsynonymous","A42S L60R Y121L Q163L",4
"lib2","SARS-CoV-2","GCTCCCTTATTGCTAT",3,61.24,9.83,-1.01,0.07,2.29,1.04,0,">1 nonsynonymous","T46S N120L I138G",3
"lib2","SARS-CoV-2","GCTCCGAACCCCATTG",1,37.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L95H N157C Q176F",3
"lib2","SARS-CoV-2","GCTCCGACCAGTATTA",2,31.01,9.92,-0.92,0.12,2.25,1.03,0.01,"1 nonsynonymous","V11H",1
"lib2","SARS-CoV-2","GCTCCGACGCAATTAC",5,7.02,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","A14P A105P",2
"lib2","SARS-CoV-2","GCTCCGACGGGAATAA",31,770.27,10.83,-0.01,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCCGACTCACAATA",4,38.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A89R C150K",2
"lib2","SARS-CoV-2","GCTCCGCTAAATAGAT",9,105.62,6,-4.83,0.72,1.5,1.18,0.01,">1 nonsynonymous","Y66Q N171K",2
"lib2","SARS-CoV-2","GCTCCGGCTATTTAAT",1,5.05,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCTCCGTGGCAGATGC",3,0,NA,NA,NA,NA,NA,NA,"stop","N1T V20T N40I R124Q E141* F167L",6
"lib2","SARS-CoV-2","GCTCCGTTTCACTAAA",4,3.55,NA,NA,NA,NA,NA,NA,"stop","G9S T15* R127*",3
"lib2","SARS-CoV-2","GCTCCTAGTCCTAACG",4,68.53,10.12,-0.72,0.05,2.93,1.01,0,">1 nonsynonymous","R27A C61D Q79E Q84E K199T",5
"lib2","SARS-CoV-2","GCTCCTGCATCATAGC",4,41.03,8.78,-2.06,0.11,1.5,1.05,0,">1 nonsynonymous","L5M I28L A42F V71L A105M L122M",6
"lib2","SARS-CoV-2","GCTCCTGCCGTCGTAT",7,25.25,8.03,-2.8,0.1,2.1,1.08,0,">1 nonsynonymous","V115L Y119H L162T",3
"lib2","SARS-CoV-2","GCTCCTGTCGAGCTAT",4,35.05,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","F70L G83S W106E Y119S",4
"lib2","SARS-CoV-2","GCTCCTGTCTTATATG",2,107.5,9.32,-1.51,0.05,2.94,1.1,0,"1 nonsynonymous","A145F",1
"lib2","SARS-CoV-2","GCTCCTTTTCCAGAAA",4,30.24,10.82,-0.02,0.05,2.98,1.04,0,">1 nonsynonymous","I2L S129V",2
"lib2","SARS-CoV-2","GCTCGAAAGAATAAAT",1,11.44,6.52,-4.31,0.54,1.5,1.2,0.03,">1 nonsynonymous","N24S Y50P D90C",3
"lib2","SARS-CoV-2","GCTCGAACCTTTCATT",2,33.72,10.2,-0.63,0.09,2.68,1.16,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","GCTCGAAGCTGATAAA",8,69.93,10.76,-0.07,0.05,2.99,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTCGAAGGATGGTAA",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y E76R Q144M",3
"lib2","SARS-CoV-2","GCTCGACACTAGCATT",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F L60Y I104T C158N",4
"lib2","SARS-CoV-2","GCTCGACCAAGTTGTT",1,20.31,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V71K S139R P169K",3
"lib2","SARS-CoV-2","GCTCGACCCTCGCATT",5,64.87,9.83,-1,0.1,2,1.1,0,"1 nonsynonymous","C49I",1
"lib2","SARS-CoV-2","GCTCGACCTGAAACTA",12,204.16,9.39,-1.45,0.06,1.79,1.13,0,">1 nonsynonymous","S19K N64L",2
"lib2","SARS-CoV-2","GCTCGACTCAATAAAT",4,23.1,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","D112R R124I F134H",3
"lib2","SARS-CoV-2","GCTCGAGCTACACCAT",6,53.86,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","A14G K94H Y119Q F134V",4
"lib2","SARS-CoV-2","GCTCGAGGTATAGGTT",5,58.58,10.75,-0.09,0.04,2.95,1.08,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","GCTCGATAAATAGGCG",10,131.65,6.71,-4.13,0.15,1.5,1.1,0,">1 nonsynonymous","R73A G146C S184G",3
"lib2","SARS-CoV-2","GCTCGATCATGATACA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","V11R S19* D98E G174Q",4
"lib2","SARS-CoV-2","GCTCGCAAAGATAAAT",2,1.68,NA,NA,NA,NA,NA,NA,"stop","I88Y T201*",2
"lib2","SARS-CoV-2","GCTCGCGCATAGATAA",1,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N F156I Y175E",3
"lib2","SARS-CoV-2","GCTCGCGGGAGTCAAC",6,256.07,10.9,0.06,0.05,2.97,1.04,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GCTCGCTGAAACAATA",2,24.29,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","C6L K94D T148S P177S",4
"lib2","SARS-CoV-2","GCTCGCTTACTACTCT",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F99A G146S P197R T201N",5
"lib2","SARS-CoV-2","GCTCGGAAAAAATACA",5,22.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L D59K I80G A190G",4
"lib2","SARS-CoV-2","GCTCGGCATCTGAGGA",6,60.46,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L38Y K94E P149L",3
"lib2","SARS-CoV-2","GCTCGGTCCAACACAA",11,125.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6V V37S V71A D97K A105L G155A G166W",7
"lib2","SARS-CoV-2","GCTCGTAAATCATCTT",1,6.76,8.77,-2.07,0.36,1.72,1.16,0.04,">1 nonsynonymous","A18R P96T S200I",3
"lib2","SARS-CoV-2","GCTCGTCTCTATTTCT",1,12.22,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y35C S43L G51A F185C",4
"lib2","SARS-CoV-2","GCTCGTCTGATGATCA",1,13.36,6,-4.84,2,1.5,1.11,0.08,">1 nonsynonymous","S36R A42V T100S W106S C158Y A190N",6
"lib2","SARS-CoV-2","GCTCGTTAGACCGAAA",1,20.87,9.86,-0.97,0.12,2.15,1.04,0.01,">1 nonsynonymous","K26L Y35M S69W D90N G152N",5
"lib2","SARS-CoV-2","GCTCGTTGCAATAGTA",4,23.96,9.01,-1.82,0.12,1.72,1.08,0.01,">1 nonsynonymous","P54K A89K",2
"lib2","SARS-CoV-2","GCTCTAAACGTGCCCT",2,0,NA,NA,NA,NA,NA,NA,"stop","F12D N58* D97E S129A",4
"lib2","SARS-CoV-2","GCTCTAAAGTCATAAA",6,87.69,10.06,-0.77,0.06,2.69,1.06,0,"1 nonsynonymous","E135W",1
"lib2","SARS-CoV-2","GCTCTAACAGCCTGAG",7,24.39,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L95K N107C P149Y",3
"lib2","SARS-CoV-2","GCTCTAACGTCACGAA",11,121.12,10.24,-0.59,0.02,2.95,1.03,0,">1 nonsynonymous","A145E L188M",2
"lib2","SARS-CoV-2","GCTCTACAAGACATCA",9,79.77,8.07,-2.77,0.24,1.5,1,0.03,">1 nonsynonymous","I2Y N107S P161E T201M",4
"lib2","SARS-CoV-2","GCTCTACACAGCTGTA",6,2.06,NA,NA,NA,NA,NA,NA,"stop","R16C Y91* N130I G146F G152N",5
"lib2","SARS-CoV-2","GCTCTACAGTGCCAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3D R25L K48* D75R",4
"lib2","SARS-CoV-2","GCTCTAGATAAAACCA",2,7.66,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L5I Q84D L95R",3
"lib2","SARS-CoV-2","GCTCTAGCATAATGGT",3,32.25,10.82,-0.02,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTCTATAAATTTACA",18,125.63,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F99S K128Y T201N",3
"lib2","SARS-CoV-2","GCTCTATAACTGTATT",6,57.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12G D59T P133M P149H",4
"lib2","SARS-CoV-2","GCTCTATAGTGTGACT",2,10.93,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S41N V65Q D112V E135M",4
"lib2","SARS-CoV-2","GCTCTATATTAAACGA",18,2.06,NA,NA,NA,NA,NA,NA,"stop","D68A F99*",2
"lib2","SARS-CoV-2","GCTCTATCCTCGCAAG",1,10.27,NA,NA,NA,NA,NA,0.31,"1 nonsynonymous","V71K",1
"lib2","SARS-CoV-2","GCTCTATGGAAGTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K G155L A190C",3
"lib2","SARS-CoV-2","GCTCTCAGGATAAGAG",9,242.95,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V153I P177L",2
"lib2","SARS-CoV-2","GCTCTCCCAAGACCCT",2,22.1,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L95R V173S K199M",3
"lib2","SARS-CoV-2","GCTCTCCCCACGGATT",3,72.55,10.18,-0.65,0.04,2.79,1.1,0,"1 nonsynonymous","F185G",1
"lib2","SARS-CoV-2","GCTCTCCGAGTACCAA",3,49.32,10.62,-0.21,0.05,2.92,1.05,0,">1 nonsynonymous","K26L T55G",2
"lib2","SARS-CoV-2","GCTCTCCTATCGGCCA",13,112.23,7.48,-3.36,0.28,1.5,1.08,0.03,">1 nonsynonymous","Y50A Y121L",2
"lib2","SARS-CoV-2","GCTCTCGAGGCAGAAT",1,8,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L5M V37F V71W N171V",4
"lib2","SARS-CoV-2","GCTCTCGTCTCAAAAT",2,15.22,9.27,-1.56,0.12,2.87,1.02,0.01,">1 nonsynonymous","D90T T170K",2
"lib2","SARS-CoV-2","GCTCTGAATGTACATA",5,0,NA,NA,NA,NA,NA,NA,"stop","W23C S36R N64R F99G R124G E141* K198G",7
"lib2","SARS-CoV-2","GCTCTGACACGCTATT",5,50.59,6.32,-4.52,0.55,1.5,1.12,0.02,">1 nonsynonymous","S41L A81I K128D F156C",4
"lib2","SARS-CoV-2","GCTCTGACTCATTCAA",4,72.79,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y35A S41F D75L P96S K128T P161M H189Q",7
"lib2","SARS-CoV-2","GCTCTGAGATAACAAC",3,65.69,9.48,-1.35,0.05,2.78,1.06,0,">1 nonsynonymous","P149Y F156L S184Y A190Y",4
"lib2","SARS-CoV-2","GCTCTGATAGTTGGAG",6,86.75,8.2,-2.64,0.14,1.56,1.1,0.01,">1 nonsynonymous","N64K K94N Y119K S129L",4
"lib2","SARS-CoV-2","GCTCTGCAATCTTAAC",4,26.71,6.7,-4.13,0.18,1.98,1.13,0.01,">1 nonsynonymous","T3S Y39L C158L",3
"lib2","SARS-CoV-2","GCTCTGCTCCTGCGCT",3,6.77,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","N1S D112N K128C V153C Q168T",5
"lib2","SARS-CoV-2","GCTCTGGAACAGAAAT",10,268.62,10.18,-0.65,0.07,2.54,1.06,0,">1 nonsynonymous","S36I G51N K132W K198M",4
"lib2","SARS-CoV-2","GCTCTGGAGTACATTC",8,54.18,8.47,-2.37,0.24,1.5,1.05,0.02,">1 nonsynonymous","S45Y D112I A190L",3
"lib2","SARS-CoV-2","GCTCTGGTTCACGGTC",1,46.31,10.84,0.01,0.05,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTCTGTAAATCATAA",10,203.76,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","I2L F167C",2
"lib2","SARS-CoV-2","GCTCTGTAATCAGCAG",9,53.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V52P N118D C150L E154M T170I",5
"lib2","SARS-CoV-2","GCTCTGTAGGCCTTTT",4,46.39,10.75,-0.08,0.04,2.98,1.06,0,"1 nonsynonymous","F62M",1
"lib2","SARS-CoV-2","GCTCTTAGACGCTTGA",2,42.45,9.09,-1.74,0.09,2.74,1.09,0,">1 nonsynonymous","Y35I S41L I142S",3
"lib2","SARS-CoV-2","GCTCTTCCCCAAGAAT",6,50.55,9.23,-1.61,0.12,1.76,1.1,0.01,">1 nonsynonymous","Y50F T55M P82I",3
"lib2","SARS-CoV-2","GCTCTTGGAAATCCCT",5,13.3,9.34,-1.49,0.26,1.7,1.21,0.03,">1 nonsynonymous","A14M A33T S45G D97K K198M",5
"lib2","SARS-CoV-2","GCTCTTTTATTTTAAA",11,110.55,9.62,-1.22,0.06,1.93,1.09,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","GCTGAAAAGAATAAAG",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N I88V V103N",3
"lib2","SARS-CoV-2","GCTGAAACCTCGGACA",1,10.88,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","A33K G74L S164M Y178K",4
"lib2","SARS-CoV-2","GCTGAAACCTCTAACG",4,10.44,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13S N40T A89I G146E",4
"lib2","SARS-CoV-2","GCTGAAAGGACTACTG",11,169.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D90N G172Y",2
"lib2","SARS-CoV-2","GCTGAAAGGCTAGTCG",5,115.39,10.07,-0.76,0.06,2.33,1.06,0,">1 nonsynonymous","N40V G83L",2
"lib2","SARS-CoV-2","GCTGAAAGGTAGCCCC",4,73.69,9.88,-0.96,0.07,2.69,1.19,0,"1 nonsynonymous","Q144F",1
"lib2","SARS-CoV-2","GCTGAAAGTCTGCAAT",4,28.9,6,-4.84,2,1.5,1.19,0.07,"1 nonsynonymous","I88Y",1
"lib2","SARS-CoV-2","GCTGAACACTAAAAGG",5,9.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15G S41H S45R N92R L131E F134V Y143K",7
"lib2","SARS-CoV-2","GCTGAACCAAATTTCC",4,29.64,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","I2P E10L L38V G51S Q84T N120F V180K",7
"lib2","SARS-CoV-2","GCTGAACGTAAGTGAG",6,21.54,8.81,-2.03,0.2,1.5,1,0.02,">1 nonsynonymous","L5F L183T",2
"lib2","SARS-CoV-2","GCTGAAGGTATGGTAC",5,28.72,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L60T D68M F185C",3
"lib2","SARS-CoV-2","GCTGAAGTGTGTGATC",5,33.33,7.91,-2.92,0.26,1.63,1.13,0.03,">1 nonsynonymous","T46P D90I G101S F160Y",4
"lib2","SARS-CoV-2","GCTGAATAAATATGCC",1,2.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","GCTGAATAACAACGCA",5,66.02,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A22G Y39V T55P A105D",4
"lib2","SARS-CoV-2","GCTGAATGGCCAGTCA",2,23.57,8.35,-2.49,0.3,1.87,1.16,0.03,">1 nonsynonymous","V153F Y175L",2
"lib2","SARS-CoV-2","GCTGAATTAAGATTAC",2,122.55,8.54,-2.29,0.09,3,1.05,0,">1 nonsynonymous","A42K G166P",2
"lib2","SARS-CoV-2","GCTGAATTTCATCTGA",9,94.13,10.72,-0.12,0.06,2.82,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGACAAAGCTATTG",7,134.24,8.64,-2.2,0.07,2.91,1.13,0,">1 nonsynonymous","Y119M G174L",2
"lib2","SARS-CoV-2","GCTGACACAAACGTTC",13,127.27,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4K I28G N120H G174S V181M",5
"lib2","SARS-CoV-2","GCTGACAGTTGTAGTA",12,100.97,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N4F E10W L38M Y91K D112N",5
"lib2","SARS-CoV-2","GCTGACCAGTACACCA",5,71.72,8.69,-2.14,0.11,2.98,1.06,0.01,"1 nonsynonymous","S113N",1
"lib2","SARS-CoV-2","GCTGACCCTACACTAA",4,25.44,10.74,-0.1,0.1,2.89,1.14,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GCTGACCCTAGTCGAT",2,0.48,NA,NA,NA,NA,NA,NA,"stop","N24* C49Y",2
"lib2","SARS-CoV-2","GCTGACCGGATTCCGT",9,62.14,6.12,-4.72,0.76,1.5,1.16,0.02,">1 nonsynonymous","A18K D68P P82T P133S E141G P149N",6
"lib2","SARS-CoV-2","GCTGACGTACGCAAAC",10,30.71,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V71R N130L F156P",3
"lib2","SARS-CoV-2","GCTGACTCACTAAGAA",6,114.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F167R T201D",2
"lib2","SARS-CoV-2","GCTGACTCGAACTATT",3,108.92,10.79,-0.05,0.04,3,1.02,0,">1 nonsynonymous","G9Y S53H",2
"lib2","SARS-CoV-2","GCTGACTTGAAAACAA",2,6.75,10.9,0.06,0.11,2.77,1.24,0,">1 nonsynonymous","T63A L122Y",2
"lib2","SARS-CoV-2","GCTGAGAACACTCCTC",1,91.64,10.26,-0.58,0.05,2.82,1.02,0,">1 nonsynonymous","D98V K128M",2
"lib2","SARS-CoV-2","GCTGAGACATAATGGG",9,54.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50S G117I K199N",3
"lib2","SARS-CoV-2","GCTGAGACTAATTAGA",8,1.52,NA,NA,NA,NA,NA,NA,"stop","R16Y V20L K56* R73E Y143L",5
"lib2","SARS-CoV-2","GCTGAGAGCCGCCAGT",2,42.59,10.82,-0.02,0.06,2.89,1.1,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","GCTGAGGATAAAACAA",16,224.03,10.04,-0.79,0.06,2.53,1.03,0,">1 nonsynonymous","C49F T100C",2
"lib2","SARS-CoV-2","GCTGAGTTATTTAAAT",1,24.68,8.7,-2.14,0.11,2.52,1.17,0,">1 nonsynonymous","K56G S139N G174V",3
"lib2","SARS-CoV-2","GCTGATAAAATTCATT",3,59.12,10.59,-0.24,0.06,2.98,1,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","GCTGATAACACTTAAC",5,1.93,NA,NA,NA,NA,NA,NA,"stop","A14S T63S D112G L122* F167V T201N",6
"lib2","SARS-CoV-2","GCTGATAACTCCTTAA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","L95K N107D S139R Q163*",4
"lib2","SARS-CoV-2","GCTGATAAGAATGACA",9,138.83,10.58,-0.26,0.03,2.86,1.09,0,">1 nonsynonymous","N1R F134N",2
"lib2","SARS-CoV-2","GCTGATAAGAATTAAA",8,178.56,10.85,0.01,0.05,2.95,1.06,0,">1 nonsynonymous","S41D D97F P197T",3
"lib2","SARS-CoV-2","GCTGATAGAGAGCATA",3,39.02,6.25,-4.59,0.88,1.5,1.25,0.04,">1 nonsynonymous","W106N G146I",2
"lib2","SARS-CoV-2","GCTGATAGGGCAAAGA",9,96.4,8.81,-2.02,0.05,3,1.08,0,">1 nonsynonymous","Y39K D90N D98S Y119D",4
"lib2","SARS-CoV-2","GCTGATATCCTATAAA",3,7.01,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","I2H W23S K48I T55S K94M",5
"lib2","SARS-CoV-2","GCTGATCACATCCCCC",2,98.1,9.33,-1.5,0.05,2.85,1.1,0,">1 nonsynonymous","Y119F F160V S184T S200T",4
"lib2","SARS-CoV-2","GCTGATCATGAAATTA",4,103.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59L Q84M T170I Q176L",4
"lib2","SARS-CoV-2","GCTGATCATTACAATT",4,93.83,9.44,-1.39,0.06,2.84,1.08,0,">1 nonsynonymous","T55N Q176A",2
"lib2","SARS-CoV-2","GCTGATCCACAATATG",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L C31L C49K A190F",4
"lib2","SARS-CoV-2","GCTGATCCCGACCGAC",8,37.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G83V G86M G155W",3
"lib2","SARS-CoV-2","GCTGATCGTAGTTCAT",2,3.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","GCTGATCTAAGAACCA",8,48.8,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L95M I104K",2
"lib2","SARS-CoV-2","GCTGATCTCTGATTTG",1,29.23,10.89,0.06,0.09,2.99,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTGATGAAACGCTAT",12,224.54,10.83,-0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGCAAAAATTTTGA",3,21.02,6.77,-4.07,0.57,1.5,1.12,0.06,">1 nonsynonymous","I28L S69A R124K",3
"lib2","SARS-CoV-2","GCTGCAACCTAAAGTA",11,89.74,10.05,-0.79,0.05,2.34,1.04,0,">1 nonsynonymous","V32L N40L K128L",3
"lib2","SARS-CoV-2","GCTGCAAGTATAACAC",2,1.43,NA,NA,NA,NA,NA,NA,"stop","V37* C49A D90I S129R G174K R179W",6
"lib2","SARS-CoV-2","GCTGCACAACACTCCA",1,18.52,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S41A S139H L183S",3
"lib2","SARS-CoV-2","GCTGCACACGAAGATT",13,147.41,10.83,-0.01,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGCACTATATTCCC",2,53.12,10.84,0,0.07,2.95,1.07,0,">1 nonsynonymous","L5E L38F",2
"lib2","SARS-CoV-2","GCTGCACTGTCAAAAG",5,10.18,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","A89Q L183R",2
"lib2","SARS-CoV-2","GCTGCAGTTCAATACC",1,12.51,8.97,-1.87,0.09,2.82,1.2,0,">1 nonsynonymous","Y119C K198V",2
"lib2","SARS-CoV-2","GCTGCATGATGCAACG",2,15.71,10.28,-0.55,0.07,2.92,1,0,">1 nonsynonymous","N30M N40T",2
"lib2","SARS-CoV-2","GCTGCATTTGGAGGCA",2,46.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D34G S41F T46G N120T C150P",5
"lib2","SARS-CoV-2","GCTGCCAAACTCAGCA",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L V181L A190I",3
"lib2","SARS-CoV-2","GCTGCCAATAAGTGAT",6,1.2,NA,NA,NA,NA,NA,NA,"stop","E10* R179F A190E",3
"lib2","SARS-CoV-2","GCTGCCACCCGTGATT",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62A C102S L122W C158S",4
"lib2","SARS-CoV-2","GCTGCCATCAATTTAA",10,124.05,10.81,-0.03,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGCCCGAACATAAA",1,12.24,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","I2N A14D Y93I G117M L131V",5
"lib2","SARS-CoV-2","GCTGCCGTCAACATGA",6,22.28,8.42,-2.42,0.3,1.5,1,0.04,">1 nonsynonymous","K26A K48C T85W K132T",4
"lib2","SARS-CoV-2","GCTGCGAAATTAGCAT",5,28.81,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6F S53M Y91P L188S",4
"lib2","SARS-CoV-2","GCTGCGAACAAAACAC",12,172.32,9.53,-1.31,0.08,2.26,1.08,0,">1 nonsynonymous","N1L Y121S V173Q",3
"lib2","SARS-CoV-2","GCTGCGAATAAACTAA",1,94.02,10.71,-0.13,0.06,2.89,1.14,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","GCTGCGAGGATGACCA",11,24.76,9.05,-1.78,0.17,1.5,1,0.02,">1 nonsynonymous","N13F V37T E135F",3
"lib2","SARS-CoV-2","GCTGCGATACACACAA",6,58.72,8.77,-2.06,0.09,3,1.05,0,">1 nonsynonymous","G83C F126Q V173K",3
"lib2","SARS-CoV-2","GCTGCGATGTTTGAAC",4,0.16,NA,NA,NA,NA,NA,NA,"stop","R27L N107* P133S C150M S200E",5
"lib2","SARS-CoV-2","GCTGCGCACATAATAA",2,7.14,6.51,-4.33,0.43,1.5,1.07,0.02,">1 nonsynonymous","S41D R136K V181W",3
"lib2","SARS-CoV-2","GCTGCGGTGAGCACTT",6,131.57,10.25,-0.59,0.04,2.97,1.01,0,">1 nonsynonymous","C31K E154T",2
"lib2","SARS-CoV-2","GCTGCGTACCTTCGCT",6,53.8,10.63,-0.21,0.05,2.92,1.07,0,">1 nonsynonymous","T15E K87Y",2
"lib2","SARS-CoV-2","GCTGCTACAACAGTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9E W23S L57R N107* D112R",5
"lib2","SARS-CoV-2","GCTGCTAGGATACTTC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","L5I F44*",2
"lib2","SARS-CoV-2","GCTGCTATGACATGCT",3,87.66,10.81,-0.03,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGCTCCGTAGCAAT",5,62.93,10.51,-0.32,0.04,3,1.01,0,">1 nonsynonymous","V32Q C61L N130D",3
"lib2","SARS-CoV-2","GCTGCTCCTAAGAAAG",6,159.1,10.16,-0.68,0.03,2.66,1.05,0,"1 nonsynonymous","F134I",1
"lib2","SARS-CoV-2","GCTGCTGAGCCGTGGG",7,12.09,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I104R L122G S184N",3
"lib2","SARS-CoV-2","GCTGCTTAAAAAGATT",1,62.28,8.36,-2.47,0.16,1.56,1.1,0.01,">1 nonsynonymous","T140M Y165S",2
"lib2","SARS-CoV-2","GCTGCTTAAGACTTCG",1,6.94,11.16,0.32,0.03,2.99,1.02,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","GCTGCTTACAAGACTG",8,40.58,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N58S P82L G146H",3
"lib2","SARS-CoV-2","GCTGCTTATAGGTATA",1,2.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q K94D R127L",3
"lib2","SARS-CoV-2","GCTGCTTCAAGTACTC",10,206.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q84W G117A K132F P177L",4
"lib2","SARS-CoV-2","GCTGCTTTTCTTAACT",6,53.46,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K48Y D90R Y119V N151P",4
"lib2","SARS-CoV-2","GCTGGAAACCCATGTG",14,125.6,9.83,-1.01,0.08,2.39,1,0,">1 nonsynonymous","I2C L38E",2
"lib2","SARS-CoV-2","GCTGGAAAGCCGGCTA",9,96.59,9.77,-1.07,0.08,1.97,1.08,0,">1 nonsynonymous","K26W D59V",2
"lib2","SARS-CoV-2","GCTGGAAGATATATCC",2,30.07,6,-4.84,2,1.77,1.23,0.02,">1 nonsynonymous","R16Y V77E D97Y N107D T148L",5
"lib2","SARS-CoV-2","GCTGGAATACACTATG",11,195.91,9.75,-1.09,0.06,2.65,1.06,0,">1 nonsynonymous","D98N N107C V173P",3
"lib2","SARS-CoV-2","GCTGGACAAAACATAG",3,43.46,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","V103T D112G",2
"lib2","SARS-CoV-2","GCTGGACAAGTGACAA",3,21.07,9.76,-1.08,0.09,2.82,1.02,0.01,">1 nonsynonymous","V37W L111Q L122G I142S",4
"lib2","SARS-CoV-2","GCTGGACCAGTCTATG",7,66.97,7.89,-2.95,0.14,1.97,1.08,0.01,">1 nonsynonymous","Y39L V77A T170L",3
"lib2","SARS-CoV-2","GCTGGACCCACTCGCA",9,127.58,10.28,-0.55,0.06,2.74,1.09,0,">1 nonsynonymous","G83V T201W",2
"lib2","SARS-CoV-2","GCTGGAGAGAACCGTA",3,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56R I88V I104S Y121R C158N Y165N K198G",7
"lib2","SARS-CoV-2","GCTGGAGATGACCTTT",4,12.6,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4M P96S V103R S108Y",4
"lib2","SARS-CoV-2","GCTGGAGTTTACATTA",10,1.61,NA,NA,NA,NA,NA,NA,"stop","V20L A42* G86E D98E E141D",5
"lib2","SARS-CoV-2","GCTGGAGTTTCCATCC",4,67.54,7.68,-3.16,0.36,1.5,1.11,0.03,">1 nonsynonymous","L38H G86E C158T",3
"lib2","SARS-CoV-2","GCTGGATAGAATTTCT",2,5.77,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","W23C A42K A81N I104L S129L Y178T",6
"lib2","SARS-CoV-2","GCTGGATAGTACGTCA",7,55.29,10.79,-0.05,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTGGATCACTGATGC",5,39.75,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","V20A I88K T100V L162G T201S",5
"lib2","SARS-CoV-2","GCTGGCCTTACCAGCA",29,397.44,10.25,-0.58,0.02,2.89,1.05,0,">1 nonsynonymous","I2E N120D T148C G152A",4
"lib2","SARS-CoV-2","GCTGGCGCCACTGGCT",9,136.61,10.86,0.02,0.04,2.95,1.06,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","GCTGGCGGACTAGTTT",9,115.63,10.47,-0.37,0.05,2.93,1.05,0,">1 nonsynonymous","D97L G116W",2
"lib2","SARS-CoV-2","GCTGGGAATTGTGCAG",17,193.85,9.81,-1.02,0.07,2.07,1.03,0,">1 nonsynonymous","S113A P133L",2
"lib2","SARS-CoV-2","GCTGGGAGAAGAAAGG",1,12.55,7.12,-3.72,0.37,2.04,1.04,0.02,"1 nonsynonymous","R179Q",1
"lib2","SARS-CoV-2","GCTGGGAGTCTGCGAA",1,18.05,9.01,-1.82,0.17,1.71,1.12,0.01,">1 nonsynonymous","F62I K94S A145S F156I",4
"lib2","SARS-CoV-2","GCTGGGATCCGCCTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* L57C Y119I E141N",4
"lib2","SARS-CoV-2","GCTGGGATTTACACGC",2,37.47,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P54T F167V",2
"lib2","SARS-CoV-2","GCTGGGCACTACAATA",4,0.49,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib2","SARS-CoV-2","GCTGGGCATTGACTCT",4,139.51,10.31,-0.53,0.05,2.85,1.09,0,">1 nonsynonymous","C61R L95V T100S",3
"lib2","SARS-CoV-2","GCTGGGCCAAGGCATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","GCTGGGGCGTTGAGCA",6,27.6,6,-4.84,2,3,1.04,0,">1 nonsynonymous","S45T A89K N120P",3
"lib2","SARS-CoV-2","GCTGGGTATCACGCAT",4,27.57,10.62,-0.21,0.06,2.98,1.03,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","GCTGGTAACACTTCCG",3,78.62,10.75,-0.08,0.05,2.95,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTGGTAAGAAAGCCC",1,17.52,10.58,-0.26,0.12,2.74,1.28,0.01,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","GCTGGTAAGCCTATAA",8,0.29,NA,NA,NA,NA,NA,NA,"stop","V52F Y119F G146F G196*",4
"lib2","SARS-CoV-2","GCTGGTATTATACGAT",4,28.92,10.14,-0.7,0.15,2.21,1.03,0.01,">1 nonsynonymous","W106M S184Y",2
"lib2","SARS-CoV-2","GCTGGTCCAGATTAAA",7,1.51,NA,NA,NA,NA,NA,NA,"stop","N13* S113L",2
"lib2","SARS-CoV-2","GCTGGTTCGGCGCTTA",3,7.66,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","C61H R179L",2
"lib2","SARS-CoV-2","GCTGGTTGAATTATGA",2,46.17,10.89,0.05,0.07,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTGGTTTGGGACACT",1,40.29,10.76,-0.07,0.05,2.88,1.11,0,"1 nonsynonymous","K114F",1
"lib2","SARS-CoV-2","GCTGTAAAAAAAGCAG",13,75.9,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","GCTGTAAAATATGTTG",1,18.96,6,-4.84,1.45,1.5,1.06,0.01,">1 nonsynonymous","S43R I80T Q84H K114C",4
"lib2","SARS-CoV-2","GCTGTAACTATTACAG",4,1.89,NA,NA,NA,NA,NA,NA,"stop","R27L D59G A105S V115T G152*",5
"lib2","SARS-CoV-2","GCTGTAAGTACGTACT",2,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L K87P K94P P149L",4
"lib2","SARS-CoV-2","GCTGTAAGTTGTTGGG",1,23.59,10.66,-0.18,0.07,2.87,1.06,0,">1 nonsynonymous","A18S D97W",2
"lib2","SARS-CoV-2","GCTGTAATAAAAACCG",5,26.01,7.96,-2.87,0.31,1.5,1.26,0.04,"1 nonsynonymous","D112A",1
"lib2","SARS-CoV-2","GCTGTAATATACGAAG",3,5.64,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","V20S A33P P96T V103M",4
"lib2","SARS-CoV-2","GCTGTAATTTAAAGTG",2,5.58,10.62,-0.22,0.12,3,1.05,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","GCTGTACCACCCAACT",7,43.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17L C49N L60D",3
"lib2","SARS-CoV-2","GCTGTAGCCATGTAAC",2,167.11,10.81,-0.03,0.04,2.93,1.05,0,"1 nonsynonymous","I2N",1
"lib2","SARS-CoV-2","GCTGTAGCTCTAATAA",2,23.87,10.56,-0.27,0.21,2.49,1.07,0.02,">1 nonsynonymous","S36M Q84K T148Y",3
"lib2","SARS-CoV-2","GCTGTATATACTCGAG",2,21.96,10.33,-0.5,0.05,2.96,1.03,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","GCTGTATGTATGACCA",3,79.91,10.74,-0.1,0.04,2.98,1.04,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","GCTGTCACCATTCTTC",6,42.93,10.11,-0.72,0.05,2.86,1.11,0,">1 nonsynonymous","P161S T201D",2
"lib2","SARS-CoV-2","GCTGTCATAACCGGTA",3,14.03,8.19,-2.65,0.39,1.5,1.13,0.07,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","GCTGTCCCTTCTTGGA",12,66.18,8.65,-2.18,0.31,1.5,1,0.04,">1 nonsynonymous","T55F P96F",2
"lib2","SARS-CoV-2","GCTGTCCGGGAATAAA",9,163.57,8.35,-2.49,0.15,2.24,1.11,0.01,">1 nonsynonymous","T55V G117V T140N S184W",4
"lib2","SARS-CoV-2","GCTGTCTCGAACTTGA",5,99.38,7.83,-3.01,0.17,1.56,1.1,0.01,">1 nonsynonymous","I142K Y178I",2
"lib2","SARS-CoV-2","GCTGTGCACCGACTCG",5,24.85,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T3L G101L",2
"lib2","SARS-CoV-2","GCTGTGCATTGCTATA",2,16.52,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y50D N109P",2
"lib2","SARS-CoV-2","GCTGTGCTTCTTGACA",1,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H Y93T",2
"lib2","SARS-CoV-2","GCTGTGGACGTCAGAT",13,135.16,9.02,-1.81,0.08,1.52,1.07,0,"1 nonsynonymous","R25A",1
"lib2","SARS-CoV-2","GCTGTGGCTATAAAAA",2,24.05,10.7,-0.13,0.04,3,1.02,0,">1 nonsynonymous","N30R K48R",2
"lib2","SARS-CoV-2","GCTGTGTTAAAACAGA",1,79.16,10.79,-0.04,0.06,2.97,1.05,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","GCTGTTAAATCTTCAG",3,9.77,8.68,-2.16,0.28,1.5,1,0.02,">1 nonsynonymous","R16K A105V E135K",3
"lib2","SARS-CoV-2","GCTGTTCCAATAGATG",6,66.86,6.19,-4.65,0.5,1.5,1.13,0.01,">1 nonsynonymous","Y39W N64V P82V G146W",4
"lib2","SARS-CoV-2","GCTGTTCGATTCAATT",3,79.55,10.76,-0.07,0.05,2.92,1.07,0,">1 nonsynonymous","N1C V173K P197D",3
"lib2","SARS-CoV-2","GCTGTTGGAGGCGATT",3,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K A14G I104A R136L T148Y",5
"lib2","SARS-CoV-2","GCTGTTGGCGAGACTT",2,23.89,8.85,-1.98,0.23,1.71,1.24,0.02,">1 nonsynonymous","D112I I138L P149T G152H",4
"lib2","SARS-CoV-2","GCTGTTTAGACATGTG",5,106.68,9.71,-1.12,0.08,2.42,1.02,0,">1 nonsynonymous","S69L V153S S200D",3
"lib2","SARS-CoV-2","GCTGTTTCACATATAA",3,1.8,NA,NA,NA,NA,NA,NA,"stop","A42T A105L S164N Y178*",4
"lib2","SARS-CoV-2","GCTGTTTCCTCGTAGG",10,72.92,6.25,-4.59,0.56,1.5,1.16,0.01,">1 nonsynonymous","A105W Y165Q",2
"lib2","SARS-CoV-2","GCTGTTTCTCTAGTAC",5,98.17,10.87,0.03,0.04,2.98,1.03,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","GCTTAAAAAACAGAAA",17,347.66,10.25,-0.58,0.03,2.81,1.02,0,">1 nonsynonymous","L5R K94C",2
"lib2","SARS-CoV-2","GCTTAAAAATATGTAT",5,94.83,10.71,-0.13,0.04,2.94,1.1,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","GCTTAAAAGATCCCAA",5,50.42,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L95A V103Q N118K",3
"lib2","SARS-CoV-2","GCTTAAACAAATTAAA",8,49.01,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V65M V103L G117L F156G",4
"lib2","SARS-CoV-2","GCTTAAAGAAAGATAG",2,12.02,10.35,-0.48,0.23,2.6,1.11,0.01,">1 nonsynonymous","N40F T140L",2
"lib2","SARS-CoV-2","GCTTAAAGGAACCAAG",7,86.83,10.81,-0.03,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTAAATAAATGAAT",4,6.49,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A33P A42T C102E",3
"lib2","SARS-CoV-2","GCTTAAATTCAAACCT",1,3,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","GCTTAACCCTGCCTTG",1,22.13,10.82,-0.02,0.07,2.99,1.06,0.01,">1 nonsynonymous","G9S Q144N",2
"lib2","SARS-CoV-2","GCTTAACCGCAGTTGG",2,1.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K T15I T85A D98F G146L V181Q",6
"lib2","SARS-CoV-2","GCTTAACGCTAACATA",8,42.98,10.38,-0.45,0.09,2.54,1.04,0,">1 nonsynonymous","A42Y D97K K132S P149L",4
"lib2","SARS-CoV-2","GCTTAACTAGTCCCAG",7,76.11,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N24S D34G P82W S139A G166E",5
"lib2","SARS-CoV-2","GCTTAAGAATATCCAA",10,151.23,10.3,-0.53,0.05,2.87,1.05,0,"1 nonsynonymous","G51A",1
"lib2","SARS-CoV-2","GCTTAAGTATTCTAAA",13,0.67,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","GCTTAATACCAAGAGT",5,21.78,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","T3R S113R E141P C150S T201L",5
"lib2","SARS-CoV-2","GCTTAATACCCCTTTA",4,26.79,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","C6V Y50I S113L",3
"lib2","SARS-CoV-2","GCTTAATATGGCCAAG",5,48.89,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E76S N109F S139L G152V",4
"lib2","SARS-CoV-2","GCTTAATCCCCTGACA",3,57.55,8.64,-2.2,0.14,1.5,1.13,0.01,"1 nonsynonymous","A89K",1
"lib2","SARS-CoV-2","GCTTAATGCCAACGAA",1,36.51,10.53,-0.31,0.08,2.95,1,0,">1 nonsynonymous","A14C K199F",2
"lib2","SARS-CoV-2","GCTTAATGCTAACCAG",2,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48T L60W",2
"lib2","SARS-CoV-2","GCTTAATTGTTGATAT",5,70.22,6,-4.84,2,3,1.15,0,">1 nonsynonymous","N13R G155F Y175S",3
"lib2","SARS-CoV-2","GCTTACACACCTAAGT",9,206.66,10.85,0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTACATTCCTAACG",13,3.3,NA,NA,NA,NA,NA,NA,"stop","I2L S19Q V37K P96* K128S",5
"lib2","SARS-CoV-2","GCTTACCACGTCCATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I I104K",2
"lib2","SARS-CoV-2","GCTTACCCTGTGTACT",2,24.33,10.68,-0.15,0.06,2.96,1.05,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","GCTTACCGGGACAAAT",2,0.46,NA,NA,NA,NA,NA,NA,"stop","C61I Y93*",2
"lib2","SARS-CoV-2","GCTTACGACAATCCCC",1,13.18,11.15,0.32,0.07,2.98,1,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","GCTTACGCTCAAATAT",1,26.82,10.75,-0.08,0.07,2.94,1.03,0,"1 nonsynonymous","R16G",1
"lib2","SARS-CoV-2","GCTTACGGAAAAACGC",6,242.89,10.68,-0.15,0.03,2.94,1.07,0,">1 nonsynonymous","N110L I138Q",2
"lib2","SARS-CoV-2","GCTTACGGAAATTCTT",3,36.53,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14S S45L L131A L162M",4
"lib2","SARS-CoV-2","GCTTACGGGATTCCAA",9,199.15,8.72,-2.12,0.07,1.78,1.1,0,">1 nonsynonymous","G9S L162W",2
"lib2","SARS-CoV-2","GCTTACGGTACACATT",9,71.83,9.12,-1.71,0.09,1.52,1.14,0,">1 nonsynonymous","P96H K128P E154S",3
"lib2","SARS-CoV-2","GCTTACTAAGAAATGC",6,118.38,9.44,-1.39,0.04,2.94,1.05,0,">1 nonsynonymous","I2L T85I F156L G174A",4
"lib2","SARS-CoV-2","GCTTACTATCCTTTTT",6,53.51,8.54,-2.29,0.14,1.72,1.14,0.01,">1 nonsynonymous","F12V S29M N64M T140P",4
"lib2","SARS-CoV-2","GCTTACTCAACCCCCA",3,16.4,6.61,-4.23,0.8,1.5,1.29,0.05,">1 nonsynonymous","N1Y P7H R136H E141I Q176P V180F",6
"lib2","SARS-CoV-2","GCTTACTGTATTGGAA",4,89,9.15,-1.69,0.12,1.7,1.14,0.01,">1 nonsynonymous","Y50I T63S Y91L",3
"lib2","SARS-CoV-2","GCTTACTTTACCAAAA",5,225.73,9.15,-1.68,0.04,2.92,1.07,0,">1 nonsynonymous","T63S Y119D S139A",3
"lib2","SARS-CoV-2","GCTTAGAATAATAACG",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K Q84E Q168K",3
"lib2","SARS-CoV-2","GCTTAGACAATGAAAA",1,11.52,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","I104S P133D T140A",3
"lib2","SARS-CoV-2","GCTTAGACATACCAAT",6,0,NA,NA,NA,NA,NA,NA,"stop","G101S S113* L131M",3
"lib2","SARS-CoV-2","GCTTAGAGCATGATGC",5,15.92,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","P96L N120S Y175A",3
"lib2","SARS-CoV-2","GCTTAGCAAATATTAC",4,21.52,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C61P F99C I138L C150P",4
"lib2","SARS-CoV-2","GCTTAGCAATCATACC",2,60.57,10.68,-0.16,0.05,2.89,1.1,0,">1 nonsynonymous","I2Q S139N",2
"lib2","SARS-CoV-2","GCTTAGCACGTGACTA",4,29.09,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K87S G116R C150Y",3
"lib2","SARS-CoV-2","GCTTAGCTGGAACGCA",4,7.12,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V37T I88A",2
"lib2","SARS-CoV-2","GCTTAGGGAGCATTGA",21,373.09,10.86,0.03,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTAGGTAAGCCGTT",4,45.88,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S36A C49N Q79H Q84R L125R T140P P169S",7
"lib2","SARS-CoV-2","GCTTAGTAGGCTATAT",3,141.55,10.84,0,0.05,2.89,1.13,0,">1 nonsynonymous","R16Y L122M K128L",3
"lib2","SARS-CoV-2","GCTTAGTATTAAATGT",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146W F167M",2
"lib2","SARS-CoV-2","GCTTAGTCACTGTCGC",2,13.49,9.8,-1.04,0.19,1.95,1.06,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","GCTTATACAATAGCCA",5,49.48,10.81,-0.03,0.07,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTTATACCGCCCGCC",8,81.83,6.72,-4.12,0.37,1.5,1.18,0.02,">1 nonsynonymous","Y35R I104G G152D",3
"lib2","SARS-CoV-2","GCTTATACTTATTAGT",7,2.32,NA,NA,NA,NA,NA,NA,"stop","V37* N92L V103M R136L D137N",5
"lib2","SARS-CoV-2","GCTTATAGAATCAAGT",1,48.24,10.24,-0.59,0.05,2.83,1.13,0,"1 nonsynonymous","I142P",1
"lib2","SARS-CoV-2","GCTTATAGACAGCAAA",47,670.22,10.82,-0.01,0.03,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTATATCTAAAACA",2,15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61F Y93T S147P F167L Y178S",5
"lib2","SARS-CoV-2","GCTTATATTTCAGCAA",3,47.5,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","E10S S36A W106P",3
"lib2","SARS-CoV-2","GCTTATCAGTTATATT",8,53.58,10.31,-0.52,0.05,2.99,1,0,"1 nonsynonymous","P7F",1
"lib2","SARS-CoV-2","GCTTATCATGACAAAC",16,182.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C61D K94L K128H Y165L H189S",5
"lib2","SARS-CoV-2","GCTTATCCACACTACC",1,54.78,10.86,0.02,0.05,2.89,1.13,0,">1 nonsynonymous","S43R D90N",2
"lib2","SARS-CoV-2","GCTTATCCATGAATGA",8,95.3,10.82,-0.01,0.07,2.99,1.04,0,"1 nonsynonymous","N40K",1
"lib2","SARS-CoV-2","GCTTATCGGCTTTGGC",6,12.63,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15H C49H V71M P149S V153C",5
"lib2","SARS-CoV-2","GCTTATCTACCGACAC",9,66.12,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","Y35N G74K K87R A89G A105V",5
"lib2","SARS-CoV-2","GCTTATGAGATCCGGC",6,58.47,10.58,-0.26,0.05,2.85,1.05,0,">1 nonsynonymous","S41K L111R",2
"lib2","SARS-CoV-2","GCTTATGATGTTTAAA",10,90.45,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F8T Y91K Q144I T201K",4
"lib2","SARS-CoV-2","GCTTATGTGCACTTGC",16,7.38,NA,NA,NA,NA,NA,NA,"stop","S29V K87* N110S Q168L",4
"lib2","SARS-CoV-2","GCTTATTAAATACTCG",9,24.12,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","Y165P V182H",2
"lib2","SARS-CoV-2","GCTTATTGCCAACTAT",9,97.71,10.82,-0.02,0.09,2.88,1.06,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","GCTTATTTATCGGTGA",3,170.52,10.03,-0.8,0.05,2.72,1.08,0,">1 nonsynonymous","N92S K198S",2
"lib2","SARS-CoV-2","GCTTATTTTCTGCACT",6,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D I104N V180E",3
"lib2","SARS-CoV-2","GCTTCAAAATCTTCAA",1,4.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S147A",1
"lib2","SARS-CoV-2","GCTTCAAAATTACTTA",7,1.26,NA,NA,NA,NA,NA,NA,"stop","G9N Y35G P177* V182W",4
"lib2","SARS-CoV-2","GCTTCAAATATCACCA",2,2.75,NA,NA,NA,NA,NA,NA,"stop","A89L R179*",2
"lib2","SARS-CoV-2","GCTTCAATAAGAATTA",3,60.32,10.53,-0.3,0.1,2.83,1.02,0.01,">1 nonsynonymous","K48I S53P",2
"lib2","SARS-CoV-2","GCTTCAATGACCCCTA",5,13.67,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N107E P161C",2
"lib2","SARS-CoV-2","GCTTCACGAATAGCAT",3,25.58,8.44,-2.4,0.15,2.77,1,0.01,">1 nonsynonymous","Y39S S113M",2
"lib2","SARS-CoV-2","GCTTCACTTGCCCATA",2,110.84,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5E Y159T P177N",3
"lib2","SARS-CoV-2","GCTTCAGAAAAACATG",4,90.38,9.09,-1.75,0.08,1.95,1.07,0,"1 nonsynonymous","Y165R",1
"lib2","SARS-CoV-2","GCTTCAGTGGTACCCT",9,107.57,10.32,-0.51,0.06,2.84,1.06,0,">1 nonsynonymous","T46I T85P",2
"lib2","SARS-CoV-2","GCTTCATAAGACACCG",5,1.16,NA,NA,NA,NA,NA,NA,"stop","T15* T46*",2
"lib2","SARS-CoV-2","GCTTCCACAATGAGCC",3,42.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61Y A81L E135G G152C G172K T201H",6
"lib2","SARS-CoV-2","GCTTCCACCACTTTCT",9,50.57,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F17N S41F C49F G74D P82G C158L",6
"lib2","SARS-CoV-2","GCTTCCAGGGAATTAT",1,5.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69F I104S N118Q",3
"lib2","SARS-CoV-2","GCTTCCATGATAGCGT",4,26.51,8.63,-2.2,0.2,1.65,1.09,0.02,">1 nonsynonymous","N107S E135L T201P",3
"lib2","SARS-CoV-2","GCTTCCATTGAAAAAA",4,25.89,9.21,-1.62,0.1,2.8,1.11,0,">1 nonsynonymous","A33I T170R",2
"lib2","SARS-CoV-2","GCTTCCCACATGCTGC",16,5.34,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","GCTTCCCATCTACCCC",12,3.8,NA,NA,NA,NA,NA,NA,"stop","S53* Y66E T201I",3
"lib2","SARS-CoV-2","GCTTCCGATAATGAAC",16,84.7,6,-4.84,1.25,1.5,1.19,0.02,">1 nonsynonymous","I88M L131A",2
"lib2","SARS-CoV-2","GCTTCCGCAACGGCCA",1,89.44,9.7,-1.14,0.12,2.35,1.05,0.01,">1 nonsynonymous","P7F L60P",2
"lib2","SARS-CoV-2","GCTTCCGTAAACATAT",1,42.82,9.36,-1.47,0.11,1.87,1.08,0.01,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","GCTTCCTGAAGTCGCG",1,14.87,7.59,-3.25,0.23,1.81,1.18,0.02,">1 nonsynonymous","I2P Y91V G155W",3
"lib2","SARS-CoV-2","GCTTCGAGAACCTGGG",1,7.19,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","E10D G51C A81V",3
"lib2","SARS-CoV-2","GCTTCGATACTAAATA",2,3.6,NA,NA,NA,NA,NA,NA,"stop","N64L G83V L162*",3
"lib2","SARS-CoV-2","GCTTCGCAATCATTCA",4,100.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2R V37C Q176F",3
"lib2","SARS-CoV-2","GCTTCGTCTTGAGAGT",3,42.27,9.55,-1.29,0.1,2.11,1.04,0,">1 nonsynonymous","L5N A81T L95V P149K",4
"lib2","SARS-CoV-2","GCTTCTACGGTTCAGG",1,0.25,NA,NA,NA,NA,NA,NA,"stop","C6R S41P I72*",3
"lib2","SARS-CoV-2","GCTTCTAGGAAGGACG",2,15.33,10.34,-0.5,0.08,2.91,1,0,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","GCTTCTAGGTGTGTCA",9,0.53,NA,NA,NA,NA,NA,NA,"stop","A42L I88* L95M K128P",4
"lib2","SARS-CoV-2","GCTTCTATGAATCTTT",4,21.35,8.35,-2.48,0.17,2.4,1.08,0.01,">1 nonsynonymous","Y119P P161T",2
"lib2","SARS-CoV-2","GCTTCTATTTAGACCG",6,26.09,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P96R N109L D137A Y175I",4
"lib2","SARS-CoV-2","GCTTCTCGGAACTGTC",7,19.96,10.82,-0.01,0.08,2.93,1.11,0,"1 nonsynonymous","F62P",1
"lib2","SARS-CoV-2","GCTTCTGAGTACACAG",1,75.1,9.53,-1.3,0.08,2.84,1.11,0,">1 nonsynonymous","F62W Q176S",2
"lib2","SARS-CoV-2","GCTTCTGTACAAATCA",8,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E Y50R K56T",3
"lib2","SARS-CoV-2","GCTTCTGTTTGTCTGA",4,0.92,NA,NA,NA,NA,NA,NA,"stop","A89Y G116N Y123*",3
"lib2","SARS-CoV-2","GCTTGAAACAAACAAG",1,68.7,10.57,-0.26,0.06,2.87,1.1,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","GCTTGAACAATTCACT",6,60.64,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6I C61A F167L",3
"lib2","SARS-CoV-2","GCTTGAAGACCATATA",1,10.37,8.19,-2.65,0.35,1.7,1.2,0.06,">1 nonsynonymous","C49W D90N D98P Q163R",4
"lib2","SARS-CoV-2","GCTTGAATTGCCACCA",3,34.18,6,-4.84,2,3,1.19,0.03,">1 nonsynonymous","T85A N107H S113R P133S H189M",5
"lib2","SARS-CoV-2","GCTTGACAACAAAAAA",6,100.4,10.15,-0.69,0.07,2.59,1.04,0,">1 nonsynonymous","A22M L122V S129A S139Q",4
"lib2","SARS-CoV-2","GCTTGACACACGAATT",2,22.16,10.76,-0.08,0.08,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTGACCACCTTGGG",1,2.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S Y91G R127P",3
"lib2","SARS-CoV-2","GCTTGACCGCCTTCCC",10,101.5,10.49,-0.35,0.03,2.97,1.04,0,">1 nonsynonymous","L5A G174D",2
"lib2","SARS-CoV-2","GCTTGACGAGACTAAC",11,537.38,7.92,-2.92,0.12,2.19,1.08,0.01,">1 nonsynonymous","F44V G117T L125N",3
"lib2","SARS-CoV-2","GCTTGACTAAAAACAA",1,18.79,6.93,-3.9,0.4,1.5,1.22,0.02,">1 nonsynonymous","N92E F167K",2
"lib2","SARS-CoV-2","GCTTGAGCTAACTAGC",3,73.35,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K26T S41A Q176P",3
"lib2","SARS-CoV-2","GCTTGAGCTACACCAA",13,2.85,NA,NA,NA,NA,NA,NA,"stop","R16* G101L L162H",3
"lib2","SARS-CoV-2","GCTTGATAAACTTGTA",5,15.1,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","V37L Y50R N58G R127N",4
"lib2","SARS-CoV-2","GCTTGATATAAATATG",12,301.77,10.23,-0.6,0.03,2.83,1.02,0,">1 nonsynonymous","S36P A42L L131I Y178F",4
"lib2","SARS-CoV-2","GCTTGATCAAACACTA",7,74.83,10.9,0.06,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTGATCAACAATAA",3,79,10.79,-0.04,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTGCAATCAACCCA",2,55.42,10.61,-0.23,0.06,2.93,1.06,0,">1 nonsynonymous","R16S V37G T85M",3
"lib2","SARS-CoV-2","GCTTGCACCTGATTAT",3,1.12,NA,NA,NA,NA,NA,NA,"stop","W23P S36G C158* V173*",4
"lib2","SARS-CoV-2","GCTTGCACTCCTACGC",1,16.83,8.93,-1.91,0.1,2.97,1.09,0,">1 nonsynonymous","Y119T G155T",2
"lib2","SARS-CoV-2","GCTTGCATAATCTAAA",8,29.39,6,-4.84,0.97,3,1.17,0.01,">1 nonsynonymous","I2F A81P Y143H E186Y",4
"lib2","SARS-CoV-2","GCTTGCGCAGCTGCGT",2,1.12,NA,NA,NA,NA,NA,NA,"stop","S53I Y66A V77C N109A Y123*",5
"lib2","SARS-CoV-2","GCTTGGAAAATCCGAA",7,235.76,10.23,-0.61,0.04,2.76,1.08,0,">1 nonsynonymous","G83H P133G P149Q",3
"lib2","SARS-CoV-2","GCTTGGCACAGTAGGA",4,27.79,8.76,-2.08,0.12,1.89,1.06,0.01,">1 nonsynonymous","F62L D98L Y121S S184V",4
"lib2","SARS-CoV-2","GCTTGGCCATACATCG",10,72.2,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","T63M R179A",2
"lib2","SARS-CoV-2","GCTTGGCCGGTTTAGA",5,0.14,NA,NA,NA,NA,NA,NA,"stop","Y39A C61E L131* K199D",4
"lib2","SARS-CoV-2","GCTTGGCTACAGTAGT",13,62.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19R N109M G116L C158P",4
"lib2","SARS-CoV-2","GCTTGGGAATGTCACT",3,65.14,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F8M V37Y G51T Y93F N130Y",5
"lib2","SARS-CoV-2","GCTTGGTACGGATAGG",6,128.42,10.06,-0.78,0.04,2.85,1.01,0,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","GCTTGGTTTTCCACAA",2,7.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49D N151T S184K",3
"lib2","SARS-CoV-2","GCTTGTAAAAAACAGA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T3P L57P D90T Q163*",4
"lib2","SARS-CoV-2","GCTTGTAATTAGGAAA",2,29.23,10,-0.83,0.06,2.11,1,0,">1 nonsynonymous","N58S D112I",2
"lib2","SARS-CoV-2","GCTTGTACAATTCTCC",2,45.57,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","D34G K56N A81D I104H N109H",5
"lib2","SARS-CoV-2","GCTTGTAGTATATACA",12,4.68,NA,NA,NA,NA,NA,NA,"stop","G9A V37* A89Y",3
"lib2","SARS-CoV-2","GCTTGTATGTCCACAC",3,31.31,9.88,-0.95,0.08,2.83,1.07,0,"1 nonsynonymous","A145R",1
"lib2","SARS-CoV-2","GCTTGTCGAATGCTAT",3,49.34,10.54,-0.3,0.05,2.98,1,0,">1 nonsynonymous","L60H N120L V153L",3
"lib2","SARS-CoV-2","GCTTGTCGATTTATAT",9,70.81,10.66,-0.17,0.05,2.91,1.04,0,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","GCTTGTGGTAGAAACT",1,39.11,10.42,-0.42,0.07,2.89,1.1,0,">1 nonsynonymous","D90L K198V",2
"lib2","SARS-CoV-2","GCTTGTTTTACACCAT",11,184.98,10.69,-0.15,0.03,2.95,1.05,0,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","GCTTTAAACTACCCCC",9,147.04,10.87,0.03,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTTAACATCACCAT",17,88.62,6,-4.84,2,3,1.24,0,">1 nonsynonymous","D68P V77M I88V",3
"lib2","SARS-CoV-2","GCTTTAACCAAAGTCC",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W S53M F62G",3
"lib2","SARS-CoV-2","GCTTTAACCAAGGGAG",10,47.62,6.29,-4.55,0.65,1.5,1.22,0.02,">1 nonsynonymous","N1Q G9L F47M P96W A105D Y178R",6
"lib2","SARS-CoV-2","GCTTTAACGTCTATAT",4,36.85,10.76,-0.08,0.04,2.97,1.01,0,">1 nonsynonymous","D59R K114W",2
"lib2","SARS-CoV-2","GCTTTAACTACACACG",3,53.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82G Y178N",2
"lib2","SARS-CoV-2","GCTTTAATATAGCTTA",8,125.65,10.83,-0.01,0.03,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTTAATATTAGTAC",14,3.77,NA,NA,NA,NA,NA,NA,"stop","L95Y F99*",2
"lib2","SARS-CoV-2","GCTTTAATCACTAATT",5,2.12,NA,NA,NA,NA,NA,NA,"stop","K94L W106L S113K Q176*",4
"lib2","SARS-CoV-2","GCTTTAATTTACCCCT",1,1.05,NA,NA,NA,NA,NA,NA,"stop","L5P L57S F99D D112*",4
"lib2","SARS-CoV-2","GCTTTACCACAAGCAG",15,118.26,6,-4.84,1.23,1.5,1.22,0.01,">1 nonsynonymous","C6R Y39R T55L S113L Q168N",5
"lib2","SARS-CoV-2","GCTTTACGCGGCAAGA",5,2.11,NA,NA,NA,NA,NA,NA,"stop","I2P F62L G86M F99* W106T",5
"lib2","SARS-CoV-2","GCTTTAGAAAATCCTG",2,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67N I88A A145F",3
"lib2","SARS-CoV-2","GCTTTAGATGAGACAT",1,0.36,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GCTTTAGGCGAAAGAT",4,60.93,10.76,-0.08,0.07,2.91,1.09,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","GCTTTAGGGAACGTCT",2,23.81,10.91,0.07,0.05,2.94,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GCTTTAGGGGGATACG",5,77.95,10.81,-0.03,0.05,2.89,1.06,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","GCTTTAGTGTTGAGGT",2,15.39,9.65,-1.19,0.32,1.5,1.08,0.04,">1 nonsynonymous","I2S G9L C102V S147P G174S",5
"lib2","SARS-CoV-2","GCTTTATAAACTAGGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","GCTTTATCTAAAATAT",2,42.89,10.82,-0.02,0.03,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GCTTTATGCAAGAGGC",2,2.96,NA,NA,NA,NA,NA,NA,"stop","W106A N171*",2
"lib2","SARS-CoV-2","GCTTTATTGACTCAGC",1,99.48,8.1,-2.73,0.12,2.29,1.05,0.01,">1 nonsynonymous","C6Q Y119W",2
"lib2","SARS-CoV-2","GCTTTATTTGTACAAC",4,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S T15L V20R A42L D59T T140F E154S",7
"lib2","SARS-CoV-2","GCTTTCAATACCGGAG",4,138.19,10.3,-0.53,0.03,2.93,1.06,0,">1 nonsynonymous","N4E Y35C",2
"lib2","SARS-CoV-2","GCTTTCACGAAACGCC",1,8.75,9.53,-1.31,0.39,2.19,1.19,0.03,">1 nonsynonymous","A18N S45T Y91V",3
"lib2","SARS-CoV-2","GCTTTCCCAAAACAAC",7,64.27,10.54,-0.3,0.05,2.9,1.11,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GCTTTCCTTGCACAAA",8,114.75,10.65,-0.19,0.03,2.91,1.06,0,"1 nonsynonymous","K128W",1
"lib2","SARS-CoV-2","GCTTTCTGTTATCTTA",3,36.36,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N64R N92M N107F F167R",4
"lib2","SARS-CoV-2","GCTTTCTTGGCCAAAT",3,43.36,10.85,0.01,0.06,2.89,1.12,0,">1 nonsynonymous","I28L L187T",2
"lib2","SARS-CoV-2","GCTTTGAAATCAATAT",5,49.97,6.73,-4.1,0.44,1.5,1.07,0.03,">1 nonsynonymous","K87E L95T N120S",3
"lib2","SARS-CoV-2","GCTTTGATAAAATACA",3,21.81,9.95,-0.88,0.08,2.91,1.06,0,">1 nonsynonymous","S139D F156N",2
"lib2","SARS-CoV-2","GCTTTGATAGTTGGGA",3,10.72,8.7,-2.13,0.31,2.1,1,0.06,">1 nonsynonymous","A105S N157C",2
"lib2","SARS-CoV-2","GCTTTGATGGATAGCA",9,192.33,9.82,-1.02,0.07,2.08,1.05,0,">1 nonsynonymous","S69M D98V K199S",3
"lib2","SARS-CoV-2","GCTTTGCACGATATAA",1,6.07,10.66,-0.17,0.47,2.67,1.29,0.05,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","GCTTTGCCATCACCCA",1,20.55,6,-4.84,1.37,3,1.17,0.01,">1 nonsynonymous","C49R R136E Y178N",3
"lib2","SARS-CoV-2","GCTTTGGTTTACTTCT",10,1.31,NA,NA,NA,NA,NA,NA,"stop","L57* T85C Y119E",3
"lib2","SARS-CoV-2","GCTTTGTAGCGAAACT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V A89L D98N E141A",4
"lib2","SARS-CoV-2","GCTTTGTTATGATCGT",7,5.88,NA,NA,NA,NA,NA,NA,"stop","T3* F44M D98S N151D",4
"lib2","SARS-CoV-2","GCTTTGTTCCTGGGTA",7,46.89,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14S V20R D68F I88K Y165E",5
"lib2","SARS-CoV-2","GCTTTTAAAATGAAGT",3,0.16,NA,NA,NA,NA,NA,NA,"stop","R16T S43N S53L N107C F156*",5
"lib2","SARS-CoV-2","GCTTTTAAATACTCTA",3,22.69,6,-4.84,1.37,1.59,1.08,0.01,">1 nonsynonymous","A67P G83S",2
"lib2","SARS-CoV-2","GCTTTTAACATCTTAG",1,7.21,10.69,-0.15,0.05,2.99,1,0,">1 nonsynonymous","L5G S29K",2
"lib2","SARS-CoV-2","GCTTTTAATATAACCG",12,120.12,10.72,-0.12,0.04,2.9,1.09,0,"1 nonsynonymous","S45H",1
"lib2","SARS-CoV-2","GCTTTTACCACAATTC",7,40.67,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S53T D59H D68K G117A K128I",5
"lib2","SARS-CoV-2","GCTTTTATAAAACAGT",2,31.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F12G Y159I G196S",3
"lib2","SARS-CoV-2","GCTTTTATAAGTTTTA",3,77.57,8.44,-2.39,0.1,2.88,1.06,0.01,"1 nonsynonymous","Y175M",1
"lib2","SARS-CoV-2","GCTTTTATGGCTGACG",3,96.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14K S113L Q144K G172T",4
"lib2","SARS-CoV-2","GCTTTTCCAGAGTTGA",2,1.37,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib2","SARS-CoV-2","GCTTTTCGATCTTGTC",3,75.82,10.02,-0.82,0.06,2.68,1.05,0,">1 nonsynonymous","A89V D97L",2
"lib2","SARS-CoV-2","GCTTTTGAGAAAGACA",25,367.05,10.75,-0.08,0.04,2.93,1.09,0,"1 nonsynonymous","S43C",1
"lib2","SARS-CoV-2","GCTTTTGGCACGGTTA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","G9N S45K L60M S184*",4
"lib2","SARS-CoV-2","GCTTTTTACGAGCTAG",8,94.42,10.59,-0.25,0.06,2.86,1.04,0,">1 nonsynonymous","Q144V K199L",2
"lib2","SARS-CoV-2","GCTTTTTACTCGCTAA",6,12.14,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A42L Y165G",2
"lib2","SARS-CoV-2","GCTTTTTGGAGTTCAG",6,88.3,10.37,-0.47,0.04,2.92,1.07,0,">1 nonsynonymous","P54Y K87A N130H",3
"lib2","SARS-CoV-2","GCTTTTTTAGTATTAC",9,76.67,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","P54N G86R Q163C",3
"lib2","SARS-CoV-2","GCTTTTTTGGAAGTGA",6,76.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C158P P169S",2
"lib2","SARS-CoV-2","GGAAAAAAAAATAAAG",3,9.11,6.61,-4.22,0.7,1.5,1.11,0.03,">1 nonsynonymous","L95E N171F V182A",3
"lib2","SARS-CoV-2","GGAAAAAACGTGCGCG",7,61.33,8.57,-2.27,0.32,1.5,1,0.05,">1 nonsynonymous","D98G D137A",2
"lib2","SARS-CoV-2","GGAAAAAAGTAATAAT",5,136,10.8,-0.04,0.06,2.94,1.07,0,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","GGAAAAAAGTGGCTAG",10,39.01,8.48,-2.35,0.16,1.59,1.13,0.01,">1 nonsynonymous","A33K L57N K87F K114V",4
"lib2","SARS-CoV-2","GGAAAAAATCCACGTG",2,127.63,10.81,-0.03,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAAAAATCCAGTCA",5,168.44,6.5,-4.33,0.17,1.5,1.11,0,">1 nonsynonymous","R78H Q168P L187S",3
"lib2","SARS-CoV-2","GGAAAAACAACTCCAC",1,46.03,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N64Y D90L P96R S108I E135K P197L",6
"lib2","SARS-CoV-2","GGAAAAACAATGACGC",3,7.53,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","R27L L125Y L183S",3
"lib2","SARS-CoV-2","GGAAAAACAGTGCCCA",5,90.35,10.72,-0.12,0.04,2.96,1.06,0,">1 nonsynonymous","S43Y A105S",2
"lib2","SARS-CoV-2","GGAAAAACCGACGAAG",7,101.42,8.98,-1.86,0.05,2.89,1.08,0,">1 nonsynonymous","P54H Y119W E141A",3
"lib2","SARS-CoV-2","GGAAAAACCTATCTAT",2,6.33,6.26,-4.57,0.98,3,1.31,0.01,">1 nonsynonymous","A14I S41N F99I G116N",4
"lib2","SARS-CoV-2","GGAAAAACGAAGAAAG",7,106.67,6,-4.84,2,1.5,1.21,0.02,"1 nonsynonymous","G172R",1
"lib2","SARS-CoV-2","GGAAAAAGAAAGTCAT",1,62.35,9.42,-1.41,0.12,2.43,1.05,0.01,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","GGAAAAAGACATAGAA",4,74.37,10.19,-0.64,0.07,2.49,1.04,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GGAAAAAGGGTATCAG",5,66.14,10.75,-0.09,0.05,2.94,1.07,0,">1 nonsynonymous","A42E P54S F160S",3
"lib2","SARS-CoV-2","GGAAAAAGTTCTCTGA",3,63.55,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S36C S108T E135S P149F Q168G",5
"lib2","SARS-CoV-2","GGAAAAAGTTGTTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","GGAAAAATAAAACATG",3,39.26,10.78,-0.06,0.09,3,1.03,0,"1 nonsynonymous","D59A",1
"lib2","SARS-CoV-2","GGAAAAATAAATTTAA",3,44.04,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","G9Y C61S N92M Y119L K128D G146A F160H",7
"lib2","SARS-CoV-2","GGAAAAATAACCCTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S I104L P149L",3
"lib2","SARS-CoV-2","GGAAAAATAATAAGAA",3,72.78,9.07,-1.77,0.04,2.95,1.09,0,">1 nonsynonymous","T140N Q168D",2
"lib2","SARS-CoV-2","GGAAAAATAGAGCAAT",2,31.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y50S A81I C150Y",3
"lib2","SARS-CoV-2","GGAAAAATAGTTGGCA",2,76.24,10.53,-0.3,0.07,2.91,1.1,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","GGAAAAATTGACAAAA",2,67.19,10.13,-0.71,0.07,2.67,1,0,">1 nonsynonymous","T3F A89T",2
"lib2","SARS-CoV-2","GGAAAAATTGTACCAT",3,22.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44M V52A Q84I D97Y E141W",5
"lib2","SARS-CoV-2","GGAAAACAAAACAAGA",2,11.3,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50L F160D",2
"lib2","SARS-CoV-2","GGAAAACACCGAACAA",4,68.06,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I28K N40T S113D",3
"lib2","SARS-CoV-2","GGAAAACAGCTGTAAG",2,35.01,10.79,-0.05,0.07,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAAACCCCGTTCAC",3,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81F D90N C102H D112N S129F",5
"lib2","SARS-CoV-2","GGAAAACCCTTATTTT",2,19.41,9.33,-1.51,0.2,1.72,1.31,0.02,">1 nonsynonymous","D90I G116K",2
"lib2","SARS-CoV-2","GGAAAACCGCGAAGAA",5,0.41,NA,NA,NA,NA,NA,NA,"stop","I142M C158*",2
"lib2","SARS-CoV-2","GGAAAACGATTGCGAG",2,9.4,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","L5G Y50N A105P",3
"lib2","SARS-CoV-2","GGAAAACGTTTCTCCA",4,1.48,NA,NA,NA,NA,NA,NA,"stop","L60E I80G G86M G155* G172S",5
"lib2","SARS-CoV-2","GGAAAACTGAACACGG",1,21.06,10.65,-0.18,0.1,2.89,1,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","GGAAAACTGTTGAGTT",8,40.96,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12I C61R D98G I104L S113P E135I",6
"lib2","SARS-CoV-2","GGAAAACTTAACAATG",5,2.46,NA,NA,NA,NA,NA,NA,"stop","F12L C102* P177S",3
"lib2","SARS-CoV-2","GGAAAAGAACGTAGGT",7,2.14,NA,NA,NA,NA,NA,NA,"stop","W106* K114E Q144S V180C",4
"lib2","SARS-CoV-2","GGAAAAGACACCAGGA",11,896.02,10.08,-0.75,0.03,2.87,1.02,0,">1 nonsynonymous","Y91M P149R K199I",3
"lib2","SARS-CoV-2","GGAAAAGATTATAAAT",10,190.07,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","C31S S53F D59M Y119K N171E",5
"lib2","SARS-CoV-2","GGAAAAGCACACCACC",4,24.1,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C6S D59L P82N D98A",4
"lib2","SARS-CoV-2","GGAAAAGCTCTGATGT",1,16.09,9.69,-1.15,0.07,2.93,1,0,"1 nonsynonymous","N118F",1
"lib2","SARS-CoV-2","GGAAAAGTCTTTCAGT",4,63.79,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C49R L60I Q84L R127L",4
"lib2","SARS-CoV-2","GGAAAAGTGCCGGCTT",4,77.94,10.24,-0.6,0.04,2.79,1.09,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","GGAAAATAACAAGAGC",3,57.66,10.12,-0.72,0.06,2.95,1.03,0,">1 nonsynonymous","T85V P169Y",2
"lib2","SARS-CoV-2","GGAAAATAAGGCGTTG",14,9.93,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V11Y R27V F44V G51P T85R F99S V103S S139Y P161G V181R",10
"lib2","SARS-CoV-2","GGAAAATACTTACAAA",10,68.37,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S19L F99R N110R",3
"lib2","SARS-CoV-2","GGAAAATAGAAGATAA",8,140.05,9.64,-1.19,0.06,1.89,1.09,0,"1 nonsynonymous","A105Q",1
"lib2","SARS-CoV-2","GGAAAATAGACTGTAG",1,10.13,10.56,-0.27,0.46,2.25,1,0.04,">1 nonsynonymous","N58K A81L",2
"lib2","SARS-CoV-2","GGAAAATCGAAGTACC",3,27.75,8.53,-2.3,0.21,1.6,1.08,0.02,"1 nonsynonymous","S108K",1
"lib2","SARS-CoV-2","GGAAAATGAAGCTTAG",7,63.56,9.36,-1.48,0.1,2.37,1.1,0.01,">1 nonsynonymous","D90E N107R",2
"lib2","SARS-CoV-2","GGAAAATTTCATTTCT",3,1.58,NA,NA,NA,NA,NA,NA,"stop","T15Y F44S L125*",3
"lib2","SARS-CoV-2","GGAAACAAAGTAATTA",3,26.13,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","D59N F70S L125R F167L",4
"lib2","SARS-CoV-2","GGAAACAAATATACTT",4,86.35,10.56,-0.27,0.03,2.92,1.04,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","GGAAACAAATCACCAG",1,14.32,10.29,-0.54,0.11,2.84,1.16,0.01,">1 nonsynonymous","S43V W106R",2
"lib2","SARS-CoV-2","GGAAACAACTCACGAA",2,19.65,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C6L D59Y Y121G",3
"lib2","SARS-CoV-2","GGAAACAAGATCTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","GGAAACAATAGGGCGA",4,67.22,6.01,-4.83,1.04,1.5,1.16,0.02,">1 nonsynonymous","T55D Q176P",2
"lib2","SARS-CoV-2","GGAAACAATTAGATTA",8,97.02,9.7,-1.14,0.06,1.95,1.06,0,">1 nonsynonymous","G9D N58R N120K F185N",4
"lib2","SARS-CoV-2","GGAAACAATTAGCGTA",17,145.08,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","GGAAACACATAAAAAT",4,11.01,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G86W T170P",2
"lib2","SARS-CoV-2","GGAAACACCCTGAGTG",4,103.72,8.57,-2.26,0.1,3,1.07,0.01,"1 nonsynonymous","G166D",1
"lib2","SARS-CoV-2","GGAAACACTCCACTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","L5D C61R D98H R124* N130W",5
"lib2","SARS-CoV-2","GGAAACACTTCCGAAA",8,47.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101L V153K",2
"lib2","SARS-CoV-2","GGAAACACTTTAACAT",4,51.13,8.53,-2.31,0.14,2.88,1,0.01,">1 nonsynonymous","A42R S113E K198G",3
"lib2","SARS-CoV-2","GGAAACAGCTTTCGCC",9,97.94,7.27,-3.57,0.22,1.5,1.14,0.01,">1 nonsynonymous","T15H Y35H G117H",3
"lib2","SARS-CoV-2","GGAAACATCAAACACA",2,20.6,9.97,-0.87,0.1,2.49,1.02,0,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","GGAAACATCACGCGAA",7,94.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F44L N58V P177W",3
"lib2","SARS-CoV-2","GGAAACATTAACAGGG",7,53.27,6,-4.84,1.52,1.5,1.21,0.02,">1 nonsynonymous","Y93A I142H",2
"lib2","SARS-CoV-2","GGAAACCAAACCAGCA",4,62.38,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N24F D59V F99Y L162Y",4
"lib2","SARS-CoV-2","GGAAACCAAGCATGTG",13,173.41,10.83,-0.01,0.05,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAACCAATCTTATT",7,64.14,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P133S Y143S S147A P177R",4
"lib2","SARS-CoV-2","GGAAACCATAAACGAT",3,46.69,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19W Y35G A81M F99Q",4
"lib2","SARS-CoV-2","GGAAACCGAATATTTA",6,88.23,10.83,0,0.05,2.98,1.04,0,"1 nonsynonymous","N24S",1
"lib2","SARS-CoV-2","GGAAACCTAAAGCTAT",3,1.32,NA,NA,NA,NA,NA,NA,"stop","Y21C W23* A42Y C61N T85I F99T W106C P149V S184K",9
"lib2","SARS-CoV-2","GGAAACCTATGAAATG",12,103.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N30E Y50L T100S",3
"lib2","SARS-CoV-2","GGAAACCTATTGTCTC",1,25.25,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T15L N40M N64H K87N N107D Y143P",6
"lib2","SARS-CoV-2","GGAAACCTCGATAGAG",4,24.65,10.87,0.04,0.07,2.86,1.17,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","GGAAACCTGGTCTAGT",1,45.62,10.52,-0.32,0.07,2.96,1.05,0,"1 nonsynonymous","V32N",1
"lib2","SARS-CoV-2","GGAAACGGGGAATACA",4,106.36,10.72,-0.11,0.04,2.91,1.09,0,">1 nonsynonymous","L5R F160G",2
"lib2","SARS-CoV-2","GGAAACTAAAAGAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6* D90P P96L G101H A145W",5
"lib2","SARS-CoV-2","GGAAACTAACAAACTA",1,80.47,10.45,-0.39,0.03,2.91,1.09,0,">1 nonsynonymous","F12V K198G",2
"lib2","SARS-CoV-2","GGAAACTAATAACGGG",13,150.14,10.79,-0.05,0.06,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAACTACTCTTGTT",6,12.66,NA,NA,NA,NA,NA,NA,"stop","I2S F70L Q176G V181*",4
"lib2","SARS-CoV-2","GGAAACTATTAGGGTA",3,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D A22T F126N",3
"lib2","SARS-CoV-2","GGAAACTCAAATAAGA",1,22.03,10.47,-0.36,0.08,2.97,1.01,0,"1 nonsynonymous","F62E",1
"lib2","SARS-CoV-2","GGAAACTCACAGATTG",7,3.18,NA,NA,NA,NA,NA,NA,"stop","I2S D98N G116S S139P R179*",5
"lib2","SARS-CoV-2","GGAAACTCACGTAATA",9,160.98,10.72,-0.12,0.04,2.94,1.06,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","GGAAACTCCGTAAATT",2,1.24,NA,NA,NA,NA,NA,NA,"stop","A42* V153P G174K V180M T201F",5
"lib2","SARS-CoV-2","GGAAACTCGATAGTCC",11,156.95,10.88,0.05,0.04,2.92,1.09,0,">1 nonsynonymous","G9E T55H T63S",3
"lib2","SARS-CoV-2","GGAAACTCGCAAACGT",2,50.18,10.37,-0.47,0.06,2.86,1.11,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","GGAAACTGAAAAATAT",2,60.11,10.91,0.07,0.07,2.98,1.02,0,"1 nonsynonymous","Y39Q",1
"lib2","SARS-CoV-2","GGAAACTGAAGTTCCA",9,118.82,8.24,-2.59,0.11,2.77,1.06,0,">1 nonsynonymous","F134L Y175C",2
"lib2","SARS-CoV-2","GGAAACTTCTGACACC",3,30.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A81E C102W D112V G117V D137K",5
"lib2","SARS-CoV-2","GGAAACTTGAATGAGC",7,9.97,NA,NA,NA,NA,NA,NA,"stop","I2A N118*",2
"lib2","SARS-CoV-2","GGAAAGAAACTAGATT",8,172.85,9.32,-1.51,0.03,2.9,1.11,0,">1 nonsynonymous","V37S N130Y Y143V",3
"lib2","SARS-CoV-2","GGAAAGAAAGGGCTTA",6,51.98,10.9,0.07,0.07,2.94,1.03,0,"1 nonsynonymous","S147D",1
"lib2","SARS-CoV-2","GGAAAGAAGGGATAAG",8,185.45,10.76,-0.08,0.04,2.89,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAAGAAGTTTAACT",1,125.85,10.77,-0.07,0.03,2.97,1.03,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","GGAAAGACACCCAAAA",11,134.03,10.2,-0.63,0.07,2.37,1.01,0,">1 nonsynonymous","Y35L P82L",2
"lib2","SARS-CoV-2","GGAAAGACATCATTGG",13,67.28,8.34,-2.5,0.16,1.5,1.04,0.01,">1 nonsynonymous","K56T S69D G116S",3
"lib2","SARS-CoV-2","GGAAAGACCCAGCCAA",1,5.79,9.92,-0.91,0.29,2.97,1,0.02,"1 nonsynonymous","A67P",1
"lib2","SARS-CoV-2","GGAAAGACGCTCAAAT",19,251.39,10.83,-0.01,0.05,2.93,1.06,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","GGAAAGACTCAGGATA",2,45.87,10.87,0.03,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAAGAGGATGTTTG",9,150.39,9.88,-0.95,0.07,2.23,1.07,0,">1 nonsynonymous","L5N K128I S139L",3
"lib2","SARS-CoV-2","GGAAAGAGTCCGAAAT",1,17.58,10.46,-0.38,0.07,3,1.02,0,">1 nonsynonymous","A42R K87N V115L L122S V173L",5
"lib2","SARS-CoV-2","GGAAAGAGTTAACTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* V37L D98G S129Y S200Y",5
"lib2","SARS-CoV-2","GGAAAGATAATACCTA",1,19.38,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","GGAAAGATCTAATATT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","S43H C61* S108H G155T",4
"lib2","SARS-CoV-2","GGAAAGCAAATGTACT",7,6.46,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K56F N92K D112F Y119Q",4
"lib2","SARS-CoV-2","GGAAAGCATACAAAAA",3,1.36,NA,NA,NA,NA,NA,NA,"stop","T3S D59V A81* W106C",4
"lib2","SARS-CoV-2","GGAAAGCATCTGATAT",3,44.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48H N64Y A89F N107T E141T",5
"lib2","SARS-CoV-2","GGAAAGCCGGAAATAG",3,19.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48I N171F",2
"lib2","SARS-CoV-2","GGAAAGCGGTCCGGTC",2,101.79,10.22,-0.62,0.07,2.56,1.05,0,">1 nonsynonymous","D59V D97Y",2
"lib2","SARS-CoV-2","GGAAAGCTACAGAGAA",12,137.82,6,-4.84,1.16,1.5,1.18,0.01,">1 nonsynonymous","V20Q V37G K56S G83Y",4
"lib2","SARS-CoV-2","GGAAAGTGACAACTAC",4,63.15,8.09,-2.74,0.16,2.05,1.18,0.01,">1 nonsynonymous","C61D N107L",2
"lib2","SARS-CoV-2","GGAAAGTGACAATAAA",3,30.74,10.81,-0.02,0.06,2.88,1.12,0,"1 nonsynonymous","F134G",1
"lib2","SARS-CoV-2","GGAAAGTGCAGAAATT",3,128.21,10.43,-0.41,0.05,2.93,1.06,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","GGAAAGTGCGGTAACG",2,13.86,8.83,-2.01,0.18,1.5,1,0.01,">1 nonsynonymous","T100N Q144D V181L S200Q",4
"lib2","SARS-CoV-2","GGAAAGTTCTAAAAAC",3,7.74,9.21,-1.62,0.2,1.62,1.02,0.02,">1 nonsynonymous","C6R D34Q L60K",3
"lib2","SARS-CoV-2","GGAAAGTTGCCACTTC",2,36.12,9.01,-1.82,0.14,1.82,1.08,0.01,">1 nonsynonymous","P96E E186T",2
"lib2","SARS-CoV-2","GGAAAGTTGGAAAACA",1,43,10.04,-0.79,0.05,2.97,1,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","GGAAAGTTTCTATTAC",1,42.4,9.03,-1.81,0.16,1.5,1.08,0.01,">1 nonsynonymous","F8M R27L V52S N110M",4
"lib2","SARS-CoV-2","GGAAATAAAAGACAAA",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R F44S F156G G172A L183P",5
"lib2","SARS-CoV-2","GGAAATAAAAGTAACA",3,13.32,11.01,0.18,0.08,2.78,1.22,0,">1 nonsynonymous","V37A S53L F160R",3
"lib2","SARS-CoV-2","GGAAATAAACAGGGAA",7,28.2,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","A42G W106C Y143W V181N",4
"lib2","SARS-CoV-2","GGAAATAAAGAATCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11I Y35I G51A A89L",4
"lib2","SARS-CoV-2","GGAAATAAATTGCCCG",5,63.95,6.42,-4.42,0.49,1.5,1.2,0.02,"1 nonsynonymous","V71E",1
"lib2","SARS-CoV-2","GGAAATAACACCGAAA",11,133.37,10.89,0.05,0.04,2.93,1.06,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GGAAATAAGTTGGTGA",3,5.76,7.22,-3.61,0.63,1.5,1,0.02,">1 nonsynonymous","D68G T100N",2
"lib2","SARS-CoV-2","GGAAATAATATTAAGA",5,1.02,NA,NA,NA,NA,NA,NA,"stop","F47N Q144Y G152*",3
"lib2","SARS-CoV-2","GGAAATACCCCCCAAG",8,84.49,10.33,-0.5,0.08,2.89,1.05,0,">1 nonsynonymous","V37N K56L N64Y Q84V F160C",5
"lib2","SARS-CoV-2","GGAAATAGACCTACAC",5,31.2,9.83,-1.01,0.09,2.4,1.04,0,">1 nonsynonymous","N40H S45Y K128I",3
"lib2","SARS-CoV-2","GGAAATAGCAGATTTT",11,206.51,10.72,-0.12,0.05,2.91,1.08,0,">1 nonsynonymous","S36E D98Y K198R",3
"lib2","SARS-CoV-2","GGAAATATATAAGTCT",7,127.55,8.25,-2.59,0.15,2.05,1.06,0.01,">1 nonsynonymous","W106S Y119S",2
"lib2","SARS-CoV-2","GGAAATATATTAAAAA",5,51.63,9.96,-0.87,0.06,2.37,1.03,0,">1 nonsynonymous","P7S V32Y S43F G51M",4
"lib2","SARS-CoV-2","GGAAATCACATCTAAA",14,148.49,10.82,-0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAATCACCATAAGA",11,91.48,10.84,0,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAATCAGACAATAC",5,34.38,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N1H I72F N107R",3
"lib2","SARS-CoV-2","GGAAATCAGATACTAA",7,135.62,9.52,-1.32,0.06,1.83,1.08,0,">1 nonsynonymous","I28Q T140G P197T",3
"lib2","SARS-CoV-2","GGAAATCCAAATCTTT",4,120.37,10.32,-0.51,0.03,2.87,1.04,0,">1 nonsynonymous","E135R T201M",2
"lib2","SARS-CoV-2","GGAAATCCTGAAAAAA",1,23.87,10.73,-0.11,0.07,2.84,1.15,0,"1 nonsynonymous","S147V",1
"lib2","SARS-CoV-2","GGAAATCGATTCAATG",9,51.08,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C49R C61V N120S T148S",4
"lib2","SARS-CoV-2","GGAAATCTAAATATGC",7,148.96,9.93,-0.9,0.05,2.76,1.07,0,">1 nonsynonymous","C61D E141H N171C",3
"lib2","SARS-CoV-2","GGAAATCTACTCAAAC",4,93.93,10.55,-0.29,0.05,2.91,1.03,0,">1 nonsynonymous","F8I T15S F44Y T55M",4
"lib2","SARS-CoV-2","GGAAATCTTCAAATAT",8,129.24,10.04,-0.79,0.06,2.64,1.05,0,">1 nonsynonymous","T85L S139K",2
"lib2","SARS-CoV-2","GGAAATGAAGATATTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R P54T T148D",3
"lib2","SARS-CoV-2","GGAAATGATAATCGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I88N R136*",2
"lib2","SARS-CoV-2","GGAAATGCCCATTAGA",6,0.46,NA,NA,NA,NA,NA,NA,"stop","P82* K128Y",2
"lib2","SARS-CoV-2","GGAAATGGCGTACTTT",4,29.46,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","F62Y R73G R127V",3
"lib2","SARS-CoV-2","GGAAATGGCTCGACAA",4,23.28,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9R A18L C49P N118L Q168M V173M",6
"lib2","SARS-CoV-2","GGAAATTAAAAAGCTG",3,37.57,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C31S S41H Y91T I104L R127M",5
"lib2","SARS-CoV-2","GGAAATTAACATGCGA",5,31.92,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","P96R N107F I138G",3
"lib2","SARS-CoV-2","GGAAATTAAGAACGGG",3,74.6,8.39,-2.45,0.2,1.5,1.06,0.02,">1 nonsynonymous","L57S G83V",2
"lib2","SARS-CoV-2","GGAAATTAATGCTTCA",16,250.47,10.35,-0.49,0.03,2.88,1.08,0,">1 nonsynonymous","S36L K87C",2
"lib2","SARS-CoV-2","GGAAATTACAAGCTTA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P54M V103*",2
"lib2","SARS-CoV-2","GGAAATTAGCGGGAGG",9,199.45,10.59,-0.24,0.03,2.93,1.07,0,"1 nonsynonymous","T15N",1
"lib2","SARS-CoV-2","GGAAATTAGTGGCGGA",1,47.85,9.04,-1.79,0.11,2.84,1.16,0,">1 nonsynonymous","F62Y G166L",2
"lib2","SARS-CoV-2","GGAAATTTCCGAACGA",3,70.38,10.63,-0.21,0.06,2.79,1.04,0,">1 nonsynonymous","A42P Q84H N130T",3
"lib2","SARS-CoV-2","GGAAATTTGATTTGGT",10,139.15,9.66,-1.18,0.03,2.94,1.04,0,">1 nonsynonymous","K26S Y39E Y119H N130K",4
"lib2","SARS-CoV-2","GGAACAAAAAATAAAC",2,37.41,6,-4.84,0.89,1.5,1.13,0.01,">1 nonsynonymous","T55L G101Y Y119V Y178R A190V",5
"lib2","SARS-CoV-2","GGAACAAAACCCAAAA",8,113.6,10.61,-0.23,0.03,2.92,1.06,0,"1 nonsynonymous","A14R",1
"lib2","SARS-CoV-2","GGAACAAAGACCTTAG",1,24.64,10.78,-0.06,0.07,2.93,1.08,0,"1 nonsynonymous","V153F",1
"lib2","SARS-CoV-2","GGAACAAAGGCCGAAG",1,1.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","GGAACAACACTAAAGC",3,10.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F47V K87V N92Y Y123M K128N",5
"lib2","SARS-CoV-2","GGAACAACGGATTGGA",5,138.41,9.26,-1.57,0.11,1.7,1.14,0.01,">1 nonsynonymous","N4R S36P K48E V52L T63M I104V",6
"lib2","SARS-CoV-2","GGAACAACTTGATGAA",2,96.72,9.98,-0.86,0.06,2.59,1.03,0,">1 nonsynonymous","V37S I104V Y178L",3
"lib2","SARS-CoV-2","GGAACAAGAAAAAACA",4,48.3,9.44,-1.39,0.1,1.78,1.07,0,">1 nonsynonymous","T15F S29L E141S",3
"lib2","SARS-CoV-2","GGAACAAGACGTCACA",1,12.08,9.75,-1.08,0.15,2.25,1.15,0.01,">1 nonsynonymous","P7K N24L N120R",3
"lib2","SARS-CoV-2","GGAACAAGGTGAGGCG",5,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L N40L I104P",3
"lib2","SARS-CoV-2","GGAACAATAAGTCCAT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y50* G83N I88K Q163Y",4
"lib2","SARS-CoV-2","GGAACAATTAATCCTA",2,2.36,NA,NA,NA,NA,NA,NA,"stop","V37T N120* F134W E186I",4
"lib2","SARS-CoV-2","GGAACACAACTAAGAA",5,37.31,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L57D F99L N120F",3
"lib2","SARS-CoV-2","GGAACACACAACTGTA",4,22.09,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","D34G Y143D",2
"lib2","SARS-CoV-2","GGAACACACGATATAT",6,47.77,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N40L P82C S139I",3
"lib2","SARS-CoV-2","GGAACACCATACCATT",2,3.45,NA,NA,NA,NA,NA,NA,"stop","D59* A81T",2
"lib2","SARS-CoV-2","GGAACACCTTATGGTA",4,45.53,8.81,-2.03,0.08,2.9,1.18,0,">1 nonsynonymous","N24S T170V",2
"lib2","SARS-CoV-2","GGAACACGATACAAAC",3,5.4,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","N30A G86E P149F K198W",4
"lib2","SARS-CoV-2","GGAACACGCATCACCT",4,0.1,NA,NA,NA,NA,NA,NA,"stop","G9* E141R",2
"lib2","SARS-CoV-2","GGAACACTAGGATGAA",2,48.87,9.74,-1.1,0.08,2.91,1.1,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","GGAACACTGATAACTG",3,50.3,8.9,-1.94,0.09,2.54,1.07,0,">1 nonsynonymous","R27G L111T",2
"lib2","SARS-CoV-2","GGAACACTGGTTCAAA",3,29.64,11.03,0.2,0.1,2.91,1.1,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","GGAACACTGTGGGTAA",9,57.74,6,-4.84,1.3,1.5,1.18,0.01,">1 nonsynonymous","N107F K199D",2
"lib2","SARS-CoV-2","GGAACAGAAAGTCCAT",6,229.27,8.41,-2.43,0.1,2.15,1.07,0,">1 nonsynonymous","N109F Y178S",2
"lib2","SARS-CoV-2","GGAACAGAGACAGATA",2,148.23,9.34,-1.49,0.04,2.88,1.1,0,">1 nonsynonymous","V37Y D97V Y119Q",3
"lib2","SARS-CoV-2","GGAACAGATTGAACTG",3,33.39,10.63,-0.2,0.08,2.92,1.11,0,">1 nonsynonymous","E141T A192M",2
"lib2","SARS-CoV-2","GGAACAGTAAAGCAAT",11,94.11,9.59,-1.25,0.13,1.72,1.14,0.01,">1 nonsynonymous","C49L C61H",2
"lib2","SARS-CoV-2","GGAACAGTTGTCAAAC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","N120I L131F R136*",3
"lib2","SARS-CoV-2","GGAACATACATATCAA",1,10.21,10.07,-0.77,0.17,2.98,1.05,0.01,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","GGAACATAGTAATATA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92G N118H Q176K",3
"lib2","SARS-CoV-2","GGAACATTAGATTTTT",2,84.63,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V77G Q176R",2
"lib2","SARS-CoV-2","GGAACATTTACAAATT",1,26.42,10.3,-0.53,0.05,2.97,1.04,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","GGAACCAAAAAATAGA",3,18.26,10.65,-0.18,0.07,2.95,1.07,0,">1 nonsynonymous","N13D Y35L",2
"lib2","SARS-CoV-2","GGAACCAAACAACACA",5,28.57,7.6,-3.24,0.26,1.5,1,0.03,">1 nonsynonymous","N1S L60V N107I",3
"lib2","SARS-CoV-2","GGAACCAATGTGAGGG",1,23.43,6,-4.84,0.58,1.5,1.04,0.01,">1 nonsynonymous","G86D L162Y T201A",3
"lib2","SARS-CoV-2","GGAACCACATAATCGG",4,48.86,10.81,-0.03,0.04,3,1.03,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","GGAACCACTACAGTTA",9,171.06,6.91,-3.93,0.16,1.5,1.1,0.01,">1 nonsynonymous","D34C S45T L95I Y175S H189Q T201F",6
"lib2","SARS-CoV-2","GGAACCAGTGAGTACC",9,27.29,6.1,-4.74,0.91,1.5,1.13,0.03,">1 nonsynonymous","D137V S147N C150L P197T",4
"lib2","SARS-CoV-2","GGAACCATAATTGGAT",9,33.87,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","F12S D90A W106R N120M",4
"lib2","SARS-CoV-2","GGAACCATCGTTTTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S36L A105* F126Y V173M F185S",5
"lib2","SARS-CoV-2","GGAACCATTAAACAGT",6,2.36,NA,NA,NA,NA,NA,NA,"stop","S69K K94E I104* F126Q",4
"lib2","SARS-CoV-2","GGAACCATTCTATTAA",3,2.02,NA,NA,NA,NA,NA,NA,"stop","R16V Y119* G146F",3
"lib2","SARS-CoV-2","GGAACCCGGAATATAA",4,33.93,10.23,-0.61,0.05,2.85,1.09,0,">1 nonsynonymous","R16C G83S",2
"lib2","SARS-CoV-2","GGAACCCGTTGATCCC",2,14.99,8.84,-1.99,0.1,2.59,1.05,0.01,">1 nonsynonymous","A89P Y143L",2
"lib2","SARS-CoV-2","GGAACCCTTGATAAAG",2,6.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","GGAACCGCAGCTCACC",1,45.63,10.45,-0.39,0.04,2.94,1.05,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","GGAACCGGATGTGCTA",2,5.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20E",1
"lib2","SARS-CoV-2","GGAACCTAAAACCGTA",5,59.33,6.18,-4.65,0.27,2.28,1.11,0,">1 nonsynonymous","Q84M A89L S129D F156Y",4
"lib2","SARS-CoV-2","GGAACCTAGACTTGCT",2,11.03,10.27,-0.57,0.15,3,1.05,0.01,">1 nonsynonymous","I2H P54V I138Y",3
"lib2","SARS-CoV-2","GGAACCTAGGTTGGAA",17,354.9,10.16,-0.67,0.02,2.95,1.04,0,">1 nonsynonymous","L5T Y91W",2
"lib2","SARS-CoV-2","GGAACCTATAGCAAAG",1,9.27,9.17,-1.66,0.47,1.5,1.18,0.04,">1 nonsynonymous","V11C W106V",2
"lib2","SARS-CoV-2","GGAACCTATGAAATCA",3,5.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25M L183A",2
"lib2","SARS-CoV-2","GGAACCTCATAAGACG",13,30.4,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F12R V182P",2
"lib2","SARS-CoV-2","GGAACCTCTTGATGCA",8,52.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K26L G74V G86E S129C V181L",5
"lib2","SARS-CoV-2","GGAACCTGATTACCCC",1,39.38,10.63,-0.21,0.06,2.93,1.03,0,">1 nonsynonymous","D59R G116N",2
"lib2","SARS-CoV-2","GGAACCTTAGATAAAA",1,14.08,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","F99D W106N",2
"lib2","SARS-CoV-2","GGAACCTTATGCGGGA",12,142.69,9.9,-0.93,0.1,2.32,1.02,0,"1 nonsynonymous","V11H",1
"lib2","SARS-CoV-2","GGAACGAACTGTGTAC",2,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45D G86W S113L",3
"lib2","SARS-CoV-2","GGAACGAATTTCCCCA",1,5.3,7.23,-3.61,0.78,1.5,1.03,0.02,">1 nonsynonymous","V20T N30R I104Q Y123F",4
"lib2","SARS-CoV-2","GGAACGAGAATTGTAA",2,21.23,8.62,-2.21,0.27,1.5,1.16,0.04,">1 nonsynonymous","A42M T55P W106L P149Q",4
"lib2","SARS-CoV-2","GGAACGATACCGCGGC",3,64.73,9.73,-1.11,0.06,2.66,1.06,0,">1 nonsynonymous","Y91Q T201C",2
"lib2","SARS-CoV-2","GGAACGCAACTGTTGA",4,9.52,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","A42L A81I D137L",3
"lib2","SARS-CoV-2","GGAACGCAAGTCAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2Q I88* E186D",3
"lib2","SARS-CoV-2","GGAACGCACGGTCTAT",3,92.38,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G51S G155L Y175R",3
"lib2","SARS-CoV-2","GGAACGCCTTACTATG",3,46.58,9.7,-1.13,0.08,2.34,1.05,0,">1 nonsynonymous","V32L N40R Q79M",3
"lib2","SARS-CoV-2","GGAACGCGGGAGGTGG",14,98.24,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","D34P Y143D",2
"lib2","SARS-CoV-2","GGAACGCGGGGGACCA",3,118.77,10.27,-0.56,0.02,2.95,1.03,0,">1 nonsynonymous","G9P K56L V77L",3
"lib2","SARS-CoV-2","GGAACGCTAGATAAAG",1,75.9,10.24,-0.6,0.05,2.95,1.03,0,">1 nonsynonymous","S41W S53I F126M",3
"lib2","SARS-CoV-2","GGAACGGAATTACCTT",6,103.11,10.04,-0.8,0.08,2.68,1,0,">1 nonsynonymous","S41Q L57I P133S",3
"lib2","SARS-CoV-2","GGAACGGATCACTTTC",8,22.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A A22F K56T I88G A105N",5
"lib2","SARS-CoV-2","GGAACGGGTTGCCCTA",2,6.91,10.39,-0.44,0.11,3,1,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","GGAACGTACTCGATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112Y T148V",2
"lib2","SARS-CoV-2","GGAACGTCATTCGTTG",3,43.8,7.18,-3.66,0.19,1.5,1.12,0.01,">1 nonsynonymous","T85L Y143N",2
"lib2","SARS-CoV-2","GGAACGTGCACCGACG",3,22.82,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F99V R127S K132R",3
"lib2","SARS-CoV-2","GGAACGTTGACAACAA",5,11.6,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5Q K26P D98P T148Y",4
"lib2","SARS-CoV-2","GGAACTAAAGAGAAAT",10,206.68,10.78,-0.06,0.04,2.93,1.09,0,"1 nonsynonymous","G83F",1
"lib2","SARS-CoV-2","GGAACTAAGCGTACCC",7,85.77,10.66,-0.17,0.05,2.94,1.1,0,">1 nonsynonymous","Y39S K132L",2
"lib2","SARS-CoV-2","GGAACTAAGTATAAGC",3,10.06,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L95R Q163P",2
"lib2","SARS-CoV-2","GGAACTACACATTCAA",4,38.42,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S69M Q84Y D112E Y119V L125P K199Y",6
"lib2","SARS-CoV-2","GGAACTACCCTACTCC",12,32.65,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","A33M Y93S",2
"lib2","SARS-CoV-2","GGAACTACCTCACGTC",8,109.89,10.83,-0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAACTAGATGTATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8M S36* L60V K94* P133V Q168K G196P",7
"lib2","SARS-CoV-2","GGAACTCAATAGTCAA",1,6.54,6.13,-4.71,1.66,3,1.08,0.01,">1 nonsynonymous","L5M T63C F99D Q163R T170F S200H",6
"lib2","SARS-CoV-2","GGAACTCAATGCCTTA",1,1.16,NA,NA,NA,NA,NA,NA,"stop","N58* Y119I C158S",3
"lib2","SARS-CoV-2","GGAACTCACACTCCGA",3,64.2,9.67,-1.16,0.13,1.73,1.14,0.01,">1 nonsynonymous","Y50M D97E",2
"lib2","SARS-CoV-2","GGAACTCACTGACACC",6,134.28,10.79,-0.05,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAACTCATTCTAAGT",2,40.94,10.76,-0.07,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAACTCTGAATTTCT",1,29.46,10.71,-0.13,0.05,3,1.03,0,">1 nonsynonymous","N4H T46F L122R T148D",4
"lib2","SARS-CoV-2","GGAACTGAACGCTGAT",2,8.9,10.36,-0.48,0.34,2.26,1.16,0.05,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","GGAACTGAATGGGGAT",2,38.85,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L5C F99R",2
"lib2","SARS-CoV-2","GGAACTGACCAACATA",1,9.56,6,-4.84,2,3,1.06,0,">1 nonsynonymous","I2T P54Q F62Y G101C N120L Y159L F167E",7
"lib2","SARS-CoV-2","GGAACTGCTAAGGCTT",5,42.44,7.79,-3.04,0.48,1.5,1.07,0.07,">1 nonsynonymous","A18L N107A N157T",3
"lib2","SARS-CoV-2","GGAACTGTATGTCCTT",4,17.63,6,-4.84,0.91,1.5,1.11,0.01,">1 nonsynonymous","Y93R E141F A190V",3
"lib2","SARS-CoV-2","GGAACTGTTTAAAACA",3,12.76,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y21P D34T N58V D97Y K128R G146W G172E",7
"lib2","SARS-CoV-2","GGAACTTGGAAGAAAG",3,0.47,NA,NA,NA,NA,NA,NA,"stop","I28F Q84K V103L Y119*",4
"lib2","SARS-CoV-2","GGAACTTTATCTGAAA",2,17.56,9.13,-1.7,0.14,2.02,1.18,0.01,">1 nonsynonymous","A42D L162W",2
"lib2","SARS-CoV-2","GGAAGAAAATACTCCA",1,30.66,6.72,-4.11,0.37,1.5,1.15,0.03,">1 nonsynonymous","F8S N24L L38M C61D",4
"lib2","SARS-CoV-2","GGAAGAAACCACAATT",6,58.94,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25L I104R Q168T K199T",4
"lib2","SARS-CoV-2","GGAAGAAAGCTAAGGC",2,76.78,8.44,-2.4,0.11,2.37,1,0,">1 nonsynonymous","T3S G117S F134R K198T",4
"lib2","SARS-CoV-2","GGAAGAAATCAGCCTA",8,63.65,10.6,-0.24,0.05,2.92,1.07,0,"1 nonsynonymous","S129W",1
"lib2","SARS-CoV-2","GGAAGAACTTTACTCC",6,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I G86W",2
"lib2","SARS-CoV-2","GGAAGAAGAAACAAAA",2,57.31,10.73,-0.1,0.05,2.96,1.03,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","GGAAGAATAAATTCCG",18,49.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41T I104D Y119F",3
"lib2","SARS-CoV-2","GGAAGAATAACTTTGC",3,7.81,8.58,-2.26,0.41,2.05,1.09,0.03,"1 nonsynonymous","G86E",1
"lib2","SARS-CoV-2","GGAAGACAAGTACACA",3,49.94,10.78,-0.06,0.04,2.97,1.04,0,">1 nonsynonymous","E141H T201D",2
"lib2","SARS-CoV-2","GGAAGACCAAAATAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","L122V Y143N T201*",3
"lib2","SARS-CoV-2","GGAAGACCAGGGATTC",1,12.77,7.79,-3.05,0.34,1.77,1.08,0.04,">1 nonsynonymous","S19K Y119L",2
"lib2","SARS-CoV-2","GGAAGACGATAATATA",2,51.55,9.32,-1.51,0.05,2.81,1.09,0,">1 nonsynonymous","T100F Q176S",2
"lib2","SARS-CoV-2","GGAAGACGGAATATTC",14,235.69,8.11,-2.73,0.15,1.5,1.04,0.01,">1 nonsynonymous","Y50L G155D",2
"lib2","SARS-CoV-2","GGAAGACTAACTATAT",5,92.01,10.81,-0.02,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGAGAAGCTCAGC",6,100.38,10.51,-0.33,0.06,2.83,1.16,0,">1 nonsynonymous","T100E T201K",2
"lib2","SARS-CoV-2","GGAAGAGGGGTGTCGA",4,13.15,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","T3V C61G I72A E141T",4
"lib2","SARS-CoV-2","GGAAGAGTTAATATTT",7,2.93,NA,NA,NA,NA,NA,NA,"stop","K26R G146*",2
"lib2","SARS-CoV-2","GGAAGATAAGCAACCA",7,105.68,10.83,0,0.05,2.97,1.04,0,">1 nonsynonymous","L5F T201S",2
"lib2","SARS-CoV-2","GGAAGATATGAACAGA",3,42.79,10.32,-0.51,0.06,2.93,1,0,"1 nonsynonymous","L183V",1
"lib2","SARS-CoV-2","GGAAGATGTAATTAAA",1,11.02,10.83,0,0.09,2.92,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGATTGCCCCCTA",3,46.99,10.46,-0.38,0.07,2.91,1.08,0,">1 nonsynonymous","F12L T55D",2
"lib2","SARS-CoV-2","GGAAGATTTCTCGAGG",11,62.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G51R F62N K87N V103R G155T",5
"lib2","SARS-CoV-2","GGAAGATTTTGACGAC",8,114.12,10.14,-0.7,0.08,2.6,1.09,0,">1 nonsynonymous","E135M P149I",2
"lib2","SARS-CoV-2","GGAAGCAACAACAAAA",4,49.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6R R25A",2
"lib2","SARS-CoV-2","GGAAGCAAGTTGAGTA",1,41.86,10.08,-0.76,0.08,2.57,1,0,">1 nonsynonymous","I88L S129A",2
"lib2","SARS-CoV-2","GGAAGCAAGTTTAACA",15,95.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M R127S G155L P169R",4
"lib2","SARS-CoV-2","GGAAGCACTAAAAGAC",2,44.76,8.73,-2.1,0.07,2.98,1.09,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","GGAAGCACTTAGATAT",2,2.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","GGAAGCAGCCTCCATA",6,30.31,7.92,-2.92,0.15,1.5,1.03,0.01,">1 nonsynonymous","S36Y N58L N118K T193I",4
"lib2","SARS-CoV-2","GGAAGCCAATATTGCT",8,48.58,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C6A D68V P82A D112I S139L",5
"lib2","SARS-CoV-2","GGAAGCCCAATGCATA",9,107.65,10.03,-0.81,0.06,2.5,1.03,0,"1 nonsynonymous","G51V",1
"lib2","SARS-CoV-2","GGAAGCCCCAATAAAA",1,88.19,8.04,-2.8,0.13,1.5,1.07,0.01,">1 nonsynonymous","S41W Q176I",2
"lib2","SARS-CoV-2","GGAAGCCGATAATGCG",6,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M V103R N171R V180R",4
"lib2","SARS-CoV-2","GGAAGCGAATACCAAC",8,1.17,NA,NA,NA,NA,NA,NA,"stop","T55R D97*",2
"lib2","SARS-CoV-2","GGAAGCGAGCTAGTTT",6,41.44,6,-4.84,1.81,1.5,1.11,0.01,">1 nonsynonymous","G9E I28E T85Q G117A",4
"lib2","SARS-CoV-2","GGAAGCGCTTATGACC",8,34.02,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","G86T T140R V180K",3
"lib2","SARS-CoV-2","GGAAGCGGCAATACTA",3,8.13,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15R G86K S139I",3
"lib2","SARS-CoV-2","GGAAGCGTTATATAAG",14,130.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37Q N157V S184R",3
"lib2","SARS-CoV-2","GGAAGCTATGACGACT",8,51.27,9.97,-0.86,0.09,2.25,1,0,">1 nonsynonymous","N13Y A22Y",2
"lib2","SARS-CoV-2","GGAAGCTCTAAAGACA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","E154*",1
"lib2","SARS-CoV-2","GGAAGCTGACACATCA",8,57.64,6,-4.84,2,1.5,1.21,0.02,"1 nonsynonymous","V182K",1
"lib2","SARS-CoV-2","GGAAGCTGATCCCCTG",8,118.3,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","F70S S113R L131S Q163P V180I",5
"lib2","SARS-CoV-2","GGAAGCTTAAACATTC",5,97.93,9.18,-1.66,0.07,2.85,1.07,0,">1 nonsynonymous","T140L G166Q",2
"lib2","SARS-CoV-2","GGAAGCTTTAGGGATA",5,18.86,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","D90P P169N",2
"lib2","SARS-CoV-2","GGAAGCTTTCCAGGCA",7,24.17,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","P96N P133A A145R S184E",4
"lib2","SARS-CoV-2","GGAAGGAAATCGTCCA",1,20.15,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","Y50R L131R G166V Q176P",4
"lib2","SARS-CoV-2","GGAAGGCAAATTCAAT",1,5.32,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L38P T85S L95T",3
"lib2","SARS-CoV-2","GGAAGGCTAAAATGAT",3,30.66,10.79,-0.05,0.07,2.82,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGGGGAACTAAGT",20,265.83,10.85,0.01,0.03,2.9,1.08,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GGAAGGGGAGAACATT",7,78.35,10.56,-0.28,0.05,2.9,1.08,0,">1 nonsynonymous","N1H T63L",2
"lib2","SARS-CoV-2","GGAAGGGGATAACCTA",1,25.04,9,-1.83,0.14,1.75,1.16,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","GGAAGGGTAGCTTAAA",1,49.67,9.66,-1.18,0.08,2.06,1.01,0,">1 nonsynonymous","Y91S E141S T148S",3
"lib2","SARS-CoV-2","GGAAGGTAAGTACTCA",8,105.92,10.9,0.06,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGGTGCACCTGAG",4,18.06,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A18T I72R D97T Y119V V180T",5
"lib2","SARS-CoV-2","GGAAGTAAACATAGAA",8,8.75,NA,NA,NA,NA,NA,NA,"stop","V20P G83* C102F",3
"lib2","SARS-CoV-2","GGAAGTAACTACGAAT",16,2.63,NA,NA,NA,NA,NA,NA,"stop","I80M Y93* G152R T170R",4
"lib2","SARS-CoV-2","GGAAGTAATCAAAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61V E154* C158L",3
"lib2","SARS-CoV-2","GGAAGTACTTGTGACT",3,70.54,10.86,0.03,0.05,2.97,1.03,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","GGAAGTAGAATAAGAT",10,1.75,NA,NA,NA,NA,NA,NA,"stop","F62I F99T A192*",3
"lib2","SARS-CoV-2","GGAAGTAGAATACTAC",6,77.74,10.76,-0.08,0.07,2.89,1.12,0,">1 nonsynonymous","S139T T201V",2
"lib2","SARS-CoV-2","GGAAGTATACAACTAA",7,2.37,NA,NA,NA,NA,NA,NA,"stop","Y50F V103*",2
"lib2","SARS-CoV-2","GGAAGTATATGCATCT",7,221.84,9.14,-1.7,0.04,2.91,1.07,0,">1 nonsynonymous","A22R Y35I Y119V",3
"lib2","SARS-CoV-2","GGAAGTCCCTGACTAA",3,4.25,NA,NA,NA,NA,NA,NA,"stop","A42* S69E K94L F99E G116V K128E",6
"lib2","SARS-CoV-2","GGAAGTGACCGCAAAA",9,96.98,10.84,0.01,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGTGACTCACCGA",11,45.8,9.25,-1.58,0.03,2.95,1.04,0,">1 nonsynonymous","C61V G166T T201S",3
"lib2","SARS-CoV-2","GGAAGTGTAATACGAG",4,32.78,10.49,-0.35,0.11,2.84,1.05,0,">1 nonsynonymous","P149L G155S",2
"lib2","SARS-CoV-2","GGAAGTGTATTCTAAA",3,13.64,7.23,-3.6,0.42,1.5,1.11,0.05,">1 nonsynonymous","T63M V77S",2
"lib2","SARS-CoV-2","GGAAGTTAGGTCAAAC",1,1.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150S",1
"lib2","SARS-CoV-2","GGAAGTTCAATGAATA",3,22.98,10.74,-0.09,0.07,2.86,1.13,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","GGAAGTTTAAGTACGC",10,244.13,10.85,0.01,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAAGTTTTGACAGTG",3,30.14,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","V11N T63W R124V A190L",4
"lib2","SARS-CoV-2","GGAATAAACCACTTCT",10,59.78,6.68,-4.16,0.48,1.5,1.27,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","GGAATAAAGATTCAAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GGAATAAAGATTCACG",1,21.48,6.7,-4.14,0.14,1.5,1.09,0,">1 nonsynonymous","I2S R136F N157M",3
"lib2","SARS-CoV-2","GGAATAAATGCAATTC",8,143.34,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A22Y C150A K199N",3
"lib2","SARS-CoV-2","GGAATAACATACTCAT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","G9W A42G N64* L162P",4
"lib2","SARS-CoV-2","GGAATAACATGGGAAA",6,74.46,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","Y39L N58T C150F Q176W",4
"lib2","SARS-CoV-2","GGAATAACCTATTCAA",4,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47E D68V",2
"lib2","SARS-CoV-2","GGAATAACCTGGGATG",5,194.33,10.55,-0.28,0.03,2.91,1.05,0,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","GGAATAACGGCAGCTG",2,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90F G172N A192T",3
"lib2","SARS-CoV-2","GGAATAAGCCTACAGC",6,41.06,6.44,-4.4,0.56,1.5,1.13,0.02,">1 nonsynonymous","L5S G83H K87Q R136P",4
"lib2","SARS-CoV-2","GGAATAAGCGGTAGAC",2,29.05,7.53,-3.31,0.13,1.86,1.06,0,">1 nonsynonymous","T55S C150F V173K",3
"lib2","SARS-CoV-2","GGAATAATAAAAAATT",6,102.94,9.44,-1.39,0.03,2.9,1.04,0,">1 nonsynonymous","Y35I T170N",2
"lib2","SARS-CoV-2","GGAATAATACAGTAAG",2,35.86,10.94,0.1,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATAATAGATCCTA",3,29.51,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F12L Y143A F167W",3
"lib2","SARS-CoV-2","GGAATAATATAGTGTT",7,0.55,NA,NA,NA,NA,NA,NA,"stop","A18S Q84* R136S",3
"lib2","SARS-CoV-2","GGAATAATCAAGCTCA",12,0.21,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGAATAATCAGTCGCA",1,22.68,6,-4.84,2,1.5,1.11,0.03,"1 nonsynonymous","L95N",1
"lib2","SARS-CoV-2","GGAATAATTACCTGAA",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q F70L",2
"lib2","SARS-CoV-2","GGAATACAATAAAAGT",9,43.7,6.45,-4.38,0.39,1.5,1.14,0.01,">1 nonsynonymous","F12R S45T Y165D S200K",4
"lib2","SARS-CoV-2","GGAATACACTCCTTTT",5,1.41,NA,NA,NA,NA,NA,NA,"stop","A42* V103T I138T",3
"lib2","SARS-CoV-2","GGAATACACTCTATGT",1,11.72,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","L125G E141V C150K",3
"lib2","SARS-CoV-2","GGAATACAGGACAACT",6,124.97,10.6,-0.23,0.05,2.91,1.09,0,">1 nonsynonymous","N109L F156P T201E",3
"lib2","SARS-CoV-2","GGAATACCAGGCTTTC",5,35.42,10.83,-0.01,0.11,2.7,1.24,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGAATACCATTTACGA",9,189.33,10.17,-0.66,0.03,2.86,1.07,0,">1 nonsynonymous","C6N A33L P149G",3
"lib2","SARS-CoV-2","GGAATACCCACAACAA",5,2.03,NA,NA,NA,NA,NA,NA,"stop","R25S Y50D K114E N120* E141S N171I K198T",7
"lib2","SARS-CoV-2","GGAATACCTCACTACA",4,1.47,NA,NA,NA,NA,NA,NA,"stop","G51V P149T K198*",3
"lib2","SARS-CoV-2","GGAATACGAATACTGG",1,14.63,6.8,-4.03,0.48,1.5,1.16,0.03,">1 nonsynonymous","N107A N130R G152W G174C",4
"lib2","SARS-CoV-2","GGAATACGGTGCTGCC",2,33.46,10.19,-0.65,0.1,2.47,1,0.01,">1 nonsynonymous","V32L S53A Q84Y",3
"lib2","SARS-CoV-2","GGAATACGTGGCCGGT",3,58.05,6,-4.84,1.53,3,1.23,0.01,">1 nonsynonymous","C49R G155C",2
"lib2","SARS-CoV-2","GGAATACTAACAAGAT",12,448.64,9.29,-1.55,0.03,2.71,1.08,0,">1 nonsynonymous","L122T P177S",2
"lib2","SARS-CoV-2","GGAATACTACAACTTC",1,1.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119M",1
"lib2","SARS-CoV-2","GGAATACTGGATCCGG",13,251.66,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D112R N130K P177S",3
"lib2","SARS-CoV-2","GGAATACTGTACCACA",15,137.74,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6M Y119M P133D S139Y F167P",5
"lib2","SARS-CoV-2","GGAATACTTATACAAT",2,26.63,10.56,-0.28,0.06,2.84,1.16,0,">1 nonsynonymous","F44D R78S",2
"lib2","SARS-CoV-2","GGAATAGAAAAAGACC",3,40.57,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F47L L131R T201M",3
"lib2","SARS-CoV-2","GGAATAGAAAAGTATG",2,53.92,10.83,0,0.07,2.9,1.13,0,"1 nonsynonymous","N151E",1
"lib2","SARS-CoV-2","GGAATAGCGGATAGGA",1,12.21,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","D68V P82W D97R",3
"lib2","SARS-CoV-2","GGAATAGGATGAAGAG",3,19.85,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","W106R F167M",2
"lib2","SARS-CoV-2","GGAATAGGCAAATAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G83* A105S",2
"lib2","SARS-CoV-2","GGAATAGGCCCAAGAA",19,117.23,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C49P G86P N118L F167V",4
"lib2","SARS-CoV-2","GGAATAGGTGATATAT",4,52.22,10.43,-0.4,0.07,3,1,0,">1 nonsynonymous","T3W G83M",2
"lib2","SARS-CoV-2","GGAATAGGTTAGTAAA",6,142.73,8.68,-2.15,0.09,2.77,1.06,0,">1 nonsynonymous","G9L G117R",2
"lib2","SARS-CoV-2","GGAATAGTCTTTGTTC",1,15.15,10.04,-0.8,0.08,2.9,1.09,0,">1 nonsynonymous","K87S I104A T201K",3
"lib2","SARS-CoV-2","GGAATATATAGATTTC",4,74.05,10.37,-0.47,0.05,2.85,1.06,0,">1 nonsynonymous","L5K A81R N130D",3
"lib2","SARS-CoV-2","GGAATATCAACGATCA",22,97.42,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5D Y50T K132R E141A E154R F185Y",6
"lib2","SARS-CoV-2","GGAATATCTAGATGAC",13,41.03,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","T15D P82M D90I",3
"lib2","SARS-CoV-2","GGAATATCTATGCACT",6,1.68,NA,NA,NA,NA,NA,NA,"stop","A14F D90* E135V Q176P C195G",5
"lib2","SARS-CoV-2","GGAATATGCCTAGAGG",2,56.2,9.14,-1.7,0.09,2.55,1.01,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","GGAATATGGAGTCACT",11,8.38,NA,NA,NA,NA,NA,NA,"stop","R27* N40R L122R V173*",4
"lib2","SARS-CoV-2","GGAATATGGCAAGAAA",5,2.51,NA,NA,NA,NA,NA,NA,"stop","N1S K56W I72C L122* N130T P149C",6
"lib2","SARS-CoV-2","GGAATATTATGAAATG",5,11.48,9.71,-1.13,0.34,2.02,1.15,0.05,">1 nonsynonymous","L5S A22Q F44R K114A",4
"lib2","SARS-CoV-2","GGAATATTCCACTCAT",3,71.81,10.83,0,0.05,2.94,1.1,0,"1 nonsynonymous","S147W",1
"lib2","SARS-CoV-2","GGAATCACACCATGCA",11,86.94,10.84,0,0.04,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATCACCACCCAGA",2,112.06,8.77,-2.06,0.08,2.15,1.08,0,">1 nonsynonymous","N4W V71L F156T K199E",4
"lib2","SARS-CoV-2","GGAATCACCATAATAA",1,32.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P54A D90V P149S Q176L",4
"lib2","SARS-CoV-2","GGAATCACTATACGAA",2,18.02,6.49,-4.35,0.25,1.5,1.09,0.01,">1 nonsynonymous","S29G G86Y",2
"lib2","SARS-CoV-2","GGAATCACTTCAGTAT",5,49.98,9.27,-1.56,0.07,1.89,1.1,0,"1 nonsynonymous","F17E",1
"lib2","SARS-CoV-2","GGAATCAGGGCTATTT",12,4.21,NA,NA,NA,NA,NA,NA,"stop","A18S T63* P149F",3
"lib2","SARS-CoV-2","GGAATCAGTCTACTTC",4,24.26,6.17,-4.67,0.48,3,1.2,0.01,">1 nonsynonymous","Y35R T55Y E141Y Y178L",4
"lib2","SARS-CoV-2","GGAATCATACCCCGTA",7,0.44,NA,NA,NA,NA,NA,NA,"stop","C61V E141* C150A",3
"lib2","SARS-CoV-2","GGAATCATCATTTTGA",4,39.4,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","G51S Y91M G101T N107S T148K",5
"lib2","SARS-CoV-2","GGAATCATTTTTAGCG",5,17.34,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y35E F47W F99V",3
"lib2","SARS-CoV-2","GGAATCCAACATTGCA",6,4.46,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGAATCCATTAGTGAA",11,217.68,10.63,-0.21,0.02,2.94,1.05,0,">1 nonsynonymous","E10P P54M",2
"lib2","SARS-CoV-2","GGAATCCCCATCGTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G116F G174*",2
"lib2","SARS-CoV-2","GGAATCCCCCCGTCCT",4,52.1,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S36W C49T T85P",3
"lib2","SARS-CoV-2","GGAATCCGAGTATACA",5,51.82,7.31,-3.53,0.17,1.5,1.11,0.01,">1 nonsynonymous","E10W V71I T170L",3
"lib2","SARS-CoV-2","GGAATCCTCTTACCAC",11,144.21,10.77,-0.07,0.03,2.97,1.05,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","GGAATCCTGAAAATAT",3,22.61,6.48,-4.36,0.61,1.5,1.2,0.03,">1 nonsynonymous","I2H F8S T63L K87L D98A Q144T",6
"lib2","SARS-CoV-2","GGAATCGCAATGTACT",2,32.11,10.73,-0.11,0.06,2.87,1.13,0,"1 nonsynonymous","T46Y",1
"lib2","SARS-CoV-2","GGAATCGCACCTATTC",4,69.69,9.06,-1.78,0.06,2.73,1.07,0,">1 nonsynonymous","Y119R G155W",2
"lib2","SARS-CoV-2","GGAATCGTGAAAGTAG",3,5.37,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T3D S41P T100D L131W",4
"lib2","SARS-CoV-2","GGAATCTAGACTTACC",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S D98S S113Q A145F",4
"lib2","SARS-CoV-2","GGAATCTAGATATAAG",1,9.11,10.37,-0.47,0.1,2.99,1.04,0,"1 nonsynonymous","A105G",1
"lib2","SARS-CoV-2","GGAATCTATTGAGAAG",6,65.3,10.67,-0.17,0.03,2.92,1.08,0,">1 nonsynonymous","I104W K128S E141T",3
"lib2","SARS-CoV-2","GGAATCTCAGGCCTAA",1,10.02,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F47D D112A",2
"lib2","SARS-CoV-2","GGAATCTCGGCCGGAA",5,43.76,9.68,-1.16,0.15,1.83,1.07,0.01,">1 nonsynonymous","F99V I104M",2
"lib2","SARS-CoV-2","GGAATCTTAGATGATT",3,24.93,10.82,-0.01,0.07,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATGAAAATACAAT",2,17.02,10.83,0,0.06,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATGAACCCTAAGC",2,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E C102L Q168E",3
"lib2","SARS-CoV-2","GGAATGAACCTCCCCT",2,31.67,10.84,0,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATGAAGCCGCCAG",3,37.89,6,-4.84,1.04,3,1.14,0.02,">1 nonsynonymous","N1L S43G V77G",3
"lib2","SARS-CoV-2","GGAATGAAGTATAGAA",5,70.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P96S I142V C150E G155S",4
"lib2","SARS-CoV-2","GGAATGACCCAATAGG",3,7.78,8.61,-2.23,0.87,1.5,1,0.08,">1 nonsynonymous","N64F A89R",2
"lib2","SARS-CoV-2","GGAATGAGATATTCAA",6,1.74,NA,NA,NA,NA,NA,NA,"stop","N4G R25V V37L K48* Y66K",5
"lib2","SARS-CoV-2","GGAATGAGGAACACAC",1,9.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14Q W106Q",2
"lib2","SARS-CoV-2","GGAATGATAAAAGCTG",1,21.61,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","P7M K87M Q176I",3
"lib2","SARS-CoV-2","GGAATGATACTTACTA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","E10L I28D E141* K198C",4
"lib2","SARS-CoV-2","GGAATGCAAAGCCAAA",5,143.87,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P7K L57R Y66F S113M N120T K132F G152Y",7
"lib2","SARS-CoV-2","GGAATGCACAACGGTC",3,81.33,10.77,-0.07,0.03,2.92,1.08,0,"1 nonsynonymous","T85N",1
"lib2","SARS-CoV-2","GGAATGCAGACTTACA",1,16.88,9.7,-1.13,0.3,1.99,1,0.03,">1 nonsynonymous","K48S L57K",2
"lib2","SARS-CoV-2","GGAATGCGAGGGTATT",2,28.27,10.64,-0.19,0.08,2.58,1.25,0,"1 nonsynonymous","N120R",1
"lib2","SARS-CoV-2","GGAATGCTAACTAAAA",2,1.48,NA,NA,NA,NA,NA,NA,"stop","T15* Y21W G51F G83I F126M",5
"lib2","SARS-CoV-2","GGAATGCTCACATCCA",1,19.25,8.98,-1.86,0.22,1.5,1.02,0.02,"1 nonsynonymous","K94P",1
"lib2","SARS-CoV-2","GGAATGCTCCGACATA",3,30.57,8.89,-1.95,0.1,2.01,1.15,0.01,">1 nonsynonymous","N64M T100F N107V",3
"lib2","SARS-CoV-2","GGAATGGAAAATCCTT",3,29.52,10.3,-0.53,0.06,2.81,1,0,">1 nonsynonymous","A81H K198S",2
"lib2","SARS-CoV-2","GGAATGGCAAAAATGT",2,74,10.72,-0.12,0.04,2.95,1.05,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","GGAATGGCAAGGAGGG",4,50.11,9.43,-1.41,0.07,2.87,1.13,0,">1 nonsynonymous","Y119N F160N",2
"lib2","SARS-CoV-2","GGAATGGCATACAATG",1,17.68,10.93,0.1,0.11,2.79,1.13,0.01,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GGAATGGCCGTTAGGC",3,20.96,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C102V R127P G152V",3
"lib2","SARS-CoV-2","GGAATGGGTGGAACCC",2,9.51,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","F62G C102R G116H K128E",4
"lib2","SARS-CoV-2","GGAATGGTTAACCGAA",19,104.18,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W106G P133Q C150G",3
"lib2","SARS-CoV-2","GGAATGTAACACAACT",3,7.45,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K87R I104D T201R",3
"lib2","SARS-CoV-2","GGAATGTAACGTAGTA",4,87.8,9.51,-1.32,0.06,1.9,1.07,0,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","GGAATGTCCCATTAAA",17,360.77,10.58,-0.26,0.03,2.92,1.1,0,">1 nonsynonymous","S53F C61K",2
"lib2","SARS-CoV-2","GGAATGTGGATAGATT",1,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114L F134W",2
"lib2","SARS-CoV-2","GGAATGTGGCACATTA",4,69.12,8.17,-2.66,0.12,2.4,1.1,0.01,">1 nonsynonymous","V115K G146K P169N",3
"lib2","SARS-CoV-2","GGAATGTGGTAACAAT",4,13.76,10.99,0.16,0.08,2.91,1.07,0.01,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","GGAATGTTGATAGATA",1,10.51,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S41C D75W A89T Y119V Y159I F167M",6
"lib2","SARS-CoV-2","GGAATTAAAGACGTTG",7,55.99,6.89,-3.94,0.2,1.59,1.18,0.01,">1 nonsynonymous","P7K P54M G86W",3
"lib2","SARS-CoV-2","GGAATTAAATTAAATT",6,17.1,6,-4.84,2,1.5,1.25,0.08,">1 nonsynonymous","L60H R127V P149L",3
"lib2","SARS-CoV-2","GGAATTAACCTTCGAG",11,129.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P82R N110Q F134D Y143I Y165F",5
"lib2","SARS-CoV-2","GGAATTAACGTCCCTC",7,133.05,6,-4.84,2,1.5,1.23,0.01,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","GGAATTAATAGTTCCG",6,43.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86F I104P R124V F167V",4
"lib2","SARS-CoV-2","GGAATTACAATCCATT",3,0.72,NA,NA,NA,NA,NA,NA,"stop","R27V Y39M G83L G166* T201N",5
"lib2","SARS-CoV-2","GGAATTACTTAAATAT",1,4.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132V",1
"lib2","SARS-CoV-2","GGAATTAGACGCGAAA",1,17.09,10.74,-0.1,0.04,2.99,1.05,0,"1 nonsynonymous","P149A",1
"lib2","SARS-CoV-2","GGAATTAGACGTACTA",2,30.24,6,-4.84,2,3,1.06,0,">1 nonsynonymous","A145I Y165K",2
"lib2","SARS-CoV-2","GGAATTAGAGTGCACC",2,59.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99K P161L",2
"lib2","SARS-CoV-2","GGAATTAGCCGAAAGT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","V37* D59* R124L",3
"lib2","SARS-CoV-2","GGAATTAGGCATTCCT",5,33.41,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6V S41M Q84V V115I Y123R E154Y S184M C195S",8
"lib2","SARS-CoV-2","GGAATTAGTCTAACCT",7,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H L38T F47S C102N S129V",5
"lib2","SARS-CoV-2","GGAATTATAAAAATAT",1,9.18,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10Q N58S P133Q E154G C158Y",5
"lib2","SARS-CoV-2","GGAATTATAACATTAA",8,122.09,10.87,0.03,0.06,2.86,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATTATCCCCTAGG",3,18.85,6.77,-4.07,0.32,1.5,1.13,0.02,">1 nonsynonymous","P7L S41F Y165R",3
"lib2","SARS-CoV-2","GGAATTCCTGAGATAC",8,192.25,10.36,-0.47,0.04,2.92,1.07,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","GGAATTCTAAAGGGCA",2,10.07,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C6D V71T C102R Y143A",4
"lib2","SARS-CoV-2","GGAATTCTCAAAACAT",8,67.52,10.85,0.02,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAATTGCATAGTACC",3,93.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17G A67C N92E T100F",4
"lib2","SARS-CoV-2","GGAATTGCCCTATTGC",5,60.37,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20Y K87S Y119T P169A Y175S",5
"lib2","SARS-CoV-2","GGAATTGCCTCAAACA",2,2.18,NA,NA,NA,NA,NA,NA,"stop","K26* F47Y K199C",3
"lib2","SARS-CoV-2","GGAATTGGATCGGTAT",12,192.34,9.88,-0.96,0.03,2.94,1.05,0,">1 nonsynonymous","K87P Y143F V173G",3
"lib2","SARS-CoV-2","GGAATTGTAAAAATAA",14,0.06,NA,NA,NA,NA,NA,NA,"stop","W23L K48*",2
"lib2","SARS-CoV-2","GGAATTGTAGCACCCG",12,88.99,9.32,-1.51,0.05,2.77,1.04,0,">1 nonsynonymous","I2G T15V C61L P149A G166S S200L",6
"lib2","SARS-CoV-2","GGAATTTCAATTGACT",5,46.19,7.03,-3.8,0.38,1.5,1.16,0.03,">1 nonsynonymous","Y50V D97G E141Q",3
"lib2","SARS-CoV-2","GGAATTTCCACTGGAG",2,67.92,10.61,-0.23,0.04,2.87,1.08,0,">1 nonsynonymous","K132T E141V",2
"lib2","SARS-CoV-2","GGAATTTCCACTTAGT",6,155.95,10.65,-0.19,0.04,2.89,1.07,0,">1 nonsynonymous","Y91M V173K",2
"lib2","SARS-CoV-2","GGAATTTCTAGGCCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","N110L N118* I138K",3
"lib2","SARS-CoV-2","GGACAAAAAAAAAGTT",6,3.59,NA,NA,NA,NA,NA,NA,"stop","V11* K56V L122R N130A",4
"lib2","SARS-CoV-2","GGACAAAAATGCCAAT",7,44.9,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49V T63H P96I G152F P177S",5
"lib2","SARS-CoV-2","GGACAAAAGAAATAGT",24,252.09,8.98,-1.85,0.06,1.59,1.12,0,">1 nonsynonymous","A89S G116R E135W",3
"lib2","SARS-CoV-2","GGACAAAAGATTGTTC",5,17.41,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","D34V F99V",2
"lib2","SARS-CoV-2","GGACAAAAGCTACTCA",2,32.76,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N92P N120E",2
"lib2","SARS-CoV-2","GGACAAAATGAATGTC",2,4.67,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGACAAAATTATCAAG",2,7,9.05,-1.79,0.41,1.7,1,0.03,">1 nonsynonymous","Y39A F44S W106A",3
"lib2","SARS-CoV-2","GGACAAACACGGATAA",5,59.8,10.87,0.04,0.06,2.94,1.08,0,"1 nonsynonymous","G196V",1
"lib2","SARS-CoV-2","GGACAAACGATGTTGG",5,39.63,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G86L L125V C150M",3
"lib2","SARS-CoV-2","GGACAAAGGTCAGAAT",2,116.96,10.86,0.03,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACAAAGTAAGTTTA",13,129.53,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C31D A105R",2
"lib2","SARS-CoV-2","GGACAAAGTCCACAAT",1,6.83,7.21,-3.63,0.67,1.5,1.31,0.07,">1 nonsynonymous","S53A T85E S129Y R136T",4
"lib2","SARS-CoV-2","GGACAAAGTGCGATCA",2,12.92,9.21,-1.63,0.05,2.96,1,0,">1 nonsynonymous","K56S Y121P",2
"lib2","SARS-CoV-2","GGACAAATAGAGCCTC",2,51.21,9.55,-1.29,0.07,2.03,1.09,0,"1 nonsynonymous","F8E",1
"lib2","SARS-CoV-2","GGACAAATATAAATAC",3,51.05,10.01,-0.82,0.09,2.63,1.06,0,">1 nonsynonymous","S139H N151V",2
"lib2","SARS-CoV-2","GGACAAATTACTATGA",6,45.07,6,-4.84,2,3,1.15,0,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","GGACAAATTCCTTAAC",4,61.33,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A22S Y50P L60T",3
"lib2","SARS-CoV-2","GGACAAATTTAGATTA",11,101.23,8.17,-2.67,0.17,1.5,1.1,0.01,">1 nonsynonymous","L5R D112H",2
"lib2","SARS-CoV-2","GGACAACAACATTGAA",4,89.26,8.17,-2.66,0.16,1.79,1.16,0.01,">1 nonsynonymous","N118L P177A",2
"lib2","SARS-CoV-2","GGACAACAGAAATATG",5,44.8,9.2,-1.63,0.17,1.67,1.08,0.01,">1 nonsynonymous","C6L W106L A190D",3
"lib2","SARS-CoV-2","GGACAACCATATATAC",4,47.08,6.06,-4.78,1.39,1.5,1.16,0.03,">1 nonsynonymous","K87N Y143L C150F G166C",4
"lib2","SARS-CoV-2","GGACAACCGTCTACAA",8,69.58,9.84,-1,0.07,1.9,1.05,0,">1 nonsynonymous","N13I T63S T100F",3
"lib2","SARS-CoV-2","GGACAACGATATCCGA",2,20.49,6,-4.84,2,3,1.07,0,">1 nonsynonymous","N107Y D137A P177L",3
"lib2","SARS-CoV-2","GGACAACGTCATGGAT",5,68.67,9.97,-0.87,0.06,2.93,1.06,0,">1 nonsynonymous","S53L S139G F156S",3
"lib2","SARS-CoV-2","GGACAACTACAGTATG",12,137.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S45M N107S F126W G152L",4
"lib2","SARS-CoV-2","GGACAACTCCAACAAG",8,122.74,9.01,-1.82,0.06,2.83,1.08,0,">1 nonsynonymous","P54I C61L D97L Y143I",4
"lib2","SARS-CoV-2","GGACAACTCGTGGGGA",5,15.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L Q168K A192R",3
"lib2","SARS-CoV-2","GGACAAGAAAACTTGT",3,38.48,10.84,0,0.05,3,1.02,0,">1 nonsynonymous","V37S D97Y",2
"lib2","SARS-CoV-2","GGACAAGAACCTATAA",11,41.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93N W106Y S139E",3
"lib2","SARS-CoV-2","GGACAAGACTCATGGG",4,51.09,10.79,-0.05,0.06,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACAAGATAGTTAGA",5,23.91,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A33H D68E Y91F Y121S G172Y",5
"lib2","SARS-CoV-2","GGACAAGGAGGATCGA",2,35.03,6,-4.84,1.33,1.5,1.09,0.01,">1 nonsynonymous","G9D N24W D112R",3
"lib2","SARS-CoV-2","GGACAAGGTCAACGGG",2,21.37,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R73E V103S S129A",3
"lib2","SARS-CoV-2","GGACAATAAGGCTTAG",12,230.35,10.83,-0.01,0.04,2.92,1.09,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","GGACAATATAAATACA",1,5.04,10.74,-0.1,0.35,2.59,1,0.02,">1 nonsynonymous","T3A S53L",2
"lib2","SARS-CoV-2","GGACAATCCAGGGCCC",9,23.73,6.52,-4.31,0.43,1.5,1.19,0.02,">1 nonsynonymous","D90S V115R F167L",3
"lib2","SARS-CoV-2","GGACAATGTAAAGAAA",5,33.14,9.93,-0.91,0.05,2.82,1,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GGACAATTCGTATACT",2,4.53,NA,NA,NA,NA,NA,NA,"stop","N4* C31L",2
"lib2","SARS-CoV-2","GGACAATTGACACCAT",4,39.8,8.88,-1.96,0.19,1.5,1.1,0.01,">1 nonsynonymous","C6D E10C V37R K56P",4
"lib2","SARS-CoV-2","GGACACAAATAAACAT",1,31.04,9.44,-1.39,0.12,1.87,1.08,0.01,">1 nonsynonymous","L5G A89H E141H",3
"lib2","SARS-CoV-2","GGACACAATAATTTAA",5,63.53,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F44S L57N G83N G117K",4
"lib2","SARS-CoV-2","GGACACAATGAGTTTG",5,0,NA,NA,NA,NA,NA,NA,"stop","G9V P82I I88* G155Y",4
"lib2","SARS-CoV-2","GGACACACAAAAAGAG",10,163.9,10.78,-0.05,0.04,2.92,1.07,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","GGACACACCGTTTTCC",4,2.09,NA,NA,NA,NA,NA,NA,"stop","S43* I80P D90N",3
"lib2","SARS-CoV-2","GGACACACCTACAAAC",1,14.77,9.54,-1.29,0.14,2.89,1.11,0.01,"1 nonsynonymous","Q168V",1
"lib2","SARS-CoV-2","GGACACACCTTCCTAA",3,5.3,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","G83R D90S R124S",3
"lib2","SARS-CoV-2","GGACACAGTGCAAACG",5,143.47,10.91,0.08,0.05,2.9,1.11,0,"1 nonsynonymous","S43Q",1
"lib2","SARS-CoV-2","GGACACATGAGCCAAG",7,108.65,9.38,-1.45,0.04,2.87,1.04,0,">1 nonsynonymous","S41K D59S G146T",3
"lib2","SARS-CoV-2","GGACACATTAGTCAGG",2,71.06,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y91M P96S N110S G146F P177L",5
"lib2","SARS-CoV-2","GGACACATTATTATAC",1,16.82,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D34L N107T N130T Q144E",4
"lib2","SARS-CoV-2","GGACACCAAAGTGAAA",6,52.65,8.96,-1.88,0.09,2.74,1.1,0,">1 nonsynonymous","I88V G117S",2
"lib2","SARS-CoV-2","GGACACCAACCCACGC",1,45.12,9.08,-1.75,0.13,2.51,1.22,0.01,">1 nonsynonymous","C61P G74H",2
"lib2","SARS-CoV-2","GGACACCAATTGCTCT",3,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T C61R Q79C D98P N130D",5
"lib2","SARS-CoV-2","GGACACCCACCTTTAA",4,74.04,10.61,-0.22,0.04,2.91,1.07,0,">1 nonsynonymous","K56M D98M",2
"lib2","SARS-CoV-2","GGACACCCCAAGAATA",2,19.15,9.09,-1.75,0.13,1.62,1.05,0.02,">1 nonsynonymous","Y50Q N64E",2
"lib2","SARS-CoV-2","GGACACCGAGAATAAG",7,76.75,10.46,-0.38,0.04,2.98,1.02,0,">1 nonsynonymous","Y39N C61D S147R",3
"lib2","SARS-CoV-2","GGACACCGTGGTACAT",1,34.9,10.93,0.09,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACACCTATACTGTG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A89Q L131F A145S",4
"lib2","SARS-CoV-2","GGACACCTCACCATTG",3,15.14,7.63,-3.2,0.1,1.77,1.01,0,">1 nonsynonymous","K26Q Y39E G86T T148S",4
"lib2","SARS-CoV-2","GGACACGAATATAGCT",4,37.48,10.92,0.08,0.08,2.79,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACACGACGCTGCGC",9,104.46,7.24,-3.6,0.23,1.5,1.1,0.01,">1 nonsynonymous","N92G P149T V173F T201D",4
"lib2","SARS-CoV-2","GGACACGATACTCAAG",2,16.48,6.2,-4.64,0.63,1.5,1.11,0.02,">1 nonsynonymous","S69V G86D E154R",3
"lib2","SARS-CoV-2","GGACACGTCTTAACCA",15,221.05,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y39W G86C F134P",3
"lib2","SARS-CoV-2","GGACACGTGCGTACGC",1,11.89,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F12S K48L N92G",3
"lib2","SARS-CoV-2","GGACACTATTTGGTAA",7,33.18,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A105P Y119L R179I",3
"lib2","SARS-CoV-2","GGACACTCGACGGTCC",10,71.37,8.15,-2.68,0.14,2.53,1.02,0.01,">1 nonsynonymous","L5P T85S T100L Y143K S147L",5
"lib2","SARS-CoV-2","GGACACTTCAACCCCC",19,11.78,NA,NA,NA,NA,NA,NA,"stop","V37R C49R F99S Y123* P149M P161N Q176V",7
"lib2","SARS-CoV-2","GGACAGAAAGATTAAG",15,116.85,10.88,0.04,0.04,2.95,1.06,0,">1 nonsynonymous","I2V P54L",2
"lib2","SARS-CoV-2","GGACAGAAATGACCAT",5,2.04,NA,NA,NA,NA,NA,NA,"stop","C6G R16L N92K L131* L188R",5
"lib2","SARS-CoV-2","GGACAGGAACTGATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G K56V S69K G116C P149Y",5
"lib2","SARS-CoV-2","GGACAGGACCCCAAAT",4,157.04,10.83,0,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACAGGATCCCTAAG",4,0.04,NA,NA,NA,NA,NA,NA,"stop","T15S F47R Y121*",3
"lib2","SARS-CoV-2","GGACAGTACCCCTGAG",1,1.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q P82R T201Y",3
"lib2","SARS-CoV-2","GGACAGTCTTTTAGAA",4,68.06,10.85,0.01,0.05,2.93,1.09,0,"1 nonsynonymous","Y39Q",1
"lib2","SARS-CoV-2","GGACATAAGGCTCTAA",4,95.18,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A18T T63S Y119V F167G K198E",5
"lib2","SARS-CoV-2","GGACATAATAACCAGA",2,0.95,NA,NA,NA,NA,NA,NA,"stop","R16A R25* Y39V D59I N107R C158G F167L",7
"lib2","SARS-CoV-2","GGACATACAAAAGTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","N40W S45M S53L F62K W106I L122* G152N V180S",8
"lib2","SARS-CoV-2","GGACATACCAATAATG",1,2.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","GGACATACGTGTTTAG",1,29.68,10.59,-0.25,0.06,2.99,1.04,0,">1 nonsynonymous","K26V K114L N151L",3
"lib2","SARS-CoV-2","GGACATACTTAGGAAG",1,17.09,10.68,-0.15,0.03,3,1.03,0,">1 nonsynonymous","T100L V153D",2
"lib2","SARS-CoV-2","GGACATAGAAGGCATC",4,46.41,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S113V G146I",2
"lib2","SARS-CoV-2","GGACATAGGAATCCCA",15,78.3,6.2,-4.64,0.98,1.5,1.25,0.03,">1 nonsynonymous","N1L F8L R16N W106D",4
"lib2","SARS-CoV-2","GGACATAGTGCTCTTA",3,41.89,9.18,-1.65,0.17,1.5,1.18,0.02,">1 nonsynonymous","Y50V G155R",2
"lib2","SARS-CoV-2","GGACATAGTTACGAAA",2,14.91,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y50D N118K R136V E141I",4
"lib2","SARS-CoV-2","GGACATATATACTGCC",3,120.29,6.93,-3.9,0.36,1.5,1.13,0.03,">1 nonsynonymous","G9T V37L N171D P177S",4
"lib2","SARS-CoV-2","GGACATATATTCGGAC",6,51.11,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","T85N G101E",2
"lib2","SARS-CoV-2","GGACATATGGCCTATA",2,11.59,9.63,-1.2,0.1,1.9,1.06,0,">1 nonsynonymous","C49L Q163G N171Q",3
"lib2","SARS-CoV-2","GGACATATGGTAGACT",2,38.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","L60T N92A N110R N120K Y178L S184W",6
"lib2","SARS-CoV-2","GGACATATTAAACTAT",6,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F F17R D34H T201R",4
"lib2","SARS-CoV-2","GGACATATTAAGCGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","K26S C61G Y91D I138R C158W Y175*",6
"lib2","SARS-CoV-2","GGACATCAACACATGA",1,21.26,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Q84W L95S T100Y D112R N118Y A145L T201S",7
"lib2","SARS-CoV-2","GGACATCCATGTAGAG",4,16.13,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3R C49G",2
"lib2","SARS-CoV-2","GGACATCGAGACGCGG",7,38.76,10.59,-0.25,0.07,2.95,1.03,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","GGACATCGCTATTATA",7,1.99,NA,NA,NA,NA,NA,NA,"stop","F62Y G83* P161F V194L",4
"lib2","SARS-CoV-2","GGACATCGTATGTGAC",6,0,NA,NA,NA,NA,NA,NA,"stop","V115I K128* G155T",3
"lib2","SARS-CoV-2","GGACATCTCCATTTAA",5,94.46,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","V37N T63E G74R A89L",4
"lib2","SARS-CoV-2","GGACATCTCCCAAATT",7,162.99,10.8,-0.03,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACATGACCAAATTC",1,8.9,10.85,0.01,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACATGCCACACCTT",6,80.28,9.75,-1.09,0.07,2.2,1.05,0,">1 nonsynonymous","S41T D98L N120S P149Y",4
"lib2","SARS-CoV-2","GGACATGCCTGCAATA",10,69.3,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","G9S S19V T63V R73M C158V",5
"lib2","SARS-CoV-2","GGACATGGCACTGAAA",6,48.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y35F C61R G86F",3
"lib2","SARS-CoV-2","GGACATGTCCAAACAG",7,181.51,9.88,-0.95,0.07,2.22,1.05,0,">1 nonsynonymous","G9R K56I Y123C T201K",4
"lib2","SARS-CoV-2","GGACATTAAGTATGTA",10,2.81,NA,NA,NA,NA,NA,NA,"stop","V11I G86Y N92S T148*",4
"lib2","SARS-CoV-2","GGACATTACGAACGAT",1,16.31,10.8,-0.04,0.06,3,1.03,0,">1 nonsynonymous","G9Q C61H",2
"lib2","SARS-CoV-2","GGACATTAGATTGAGG",2,73.2,9.61,-1.23,0.04,2.93,1.04,0,"1 nonsynonymous","G74H",1
"lib2","SARS-CoV-2","GGACATTGAAACGGGA",4,29.61,6.96,-3.87,0.51,1.5,1.09,0.07,">1 nonsynonymous","F17S C61W A81Y C195S",4
"lib2","SARS-CoV-2","GGACATTGAACTATAG",5,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S N109Q I142N",3
"lib2","SARS-CoV-2","GGACATTTACTTTAAT",3,0.59,NA,NA,NA,NA,NA,NA,"stop","L122* Y178I",2
"lib2","SARS-CoV-2","GGACATTTTTTCGCAA",15,228.24,9.64,-1.2,0.09,2.28,1.09,0,">1 nonsynonymous","S53L I88V I138C E154N",4
"lib2","SARS-CoV-2","GGACCAAAATGGTACG",1,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T I80K N120L",3
"lib2","SARS-CoV-2","GGACCAAACATATTGG",22,174.46,10.88,0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCAAAGGATCGAT",7,12.34,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","V103E S184L",2
"lib2","SARS-CoV-2","GGACCAACCCCAAGGT",2,33.93,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14Q Y39L A81S D112T N171L",5
"lib2","SARS-CoV-2","GGACCAACGGAGACAA",2,21.22,10.86,0.02,0.07,2.94,1.1,0,">1 nonsynonymous","S129K F160C T201I",3
"lib2","SARS-CoV-2","GGACCAAGAATTTATA",2,20.62,9.63,-1.2,0.25,2.5,1.15,0.03,">1 nonsynonymous","N58I K87L",2
"lib2","SARS-CoV-2","GGACCAATAGACTTGA",16,197.85,8.64,-2.19,0.1,2.67,1.07,0,">1 nonsynonymous","T63M G116Y P169D",3
"lib2","SARS-CoV-2","GGACCAATCCCGGTCC",8,229.82,10.8,-0.04,0.06,2.85,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCAATCTAAAGTA",10,52.64,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F47S A81V I88Y",3
"lib2","SARS-CoV-2","GGACCAATTAAAATAT",1,83.45,10.8,-0.03,0.06,2.94,1.08,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","GGACCACATCCGGCAA",1,17.65,11.07,0.24,0.05,2.99,1.03,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","GGACCACCTTTGATTT",1,5.95,6,-4.84,2,3,1.05,0,">1 nonsynonymous","P54L P82A F99R",3
"lib2","SARS-CoV-2","GGACCACGTCTCAAAA",2,32.77,10.36,-0.48,0.04,2.97,1.03,0,">1 nonsynonymous","T55N D98V G196R",3
"lib2","SARS-CoV-2","GGACCAGAGCTAAAAT",1,26.43,9.58,-1.26,0.04,2.9,1.07,0,">1 nonsynonymous","G9T T170H",2
"lib2","SARS-CoV-2","GGACCATAAAGACAGG",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17A Y50A F70M A89F N120M L131T E141P",7
"lib2","SARS-CoV-2","GGACCATACTAAAACA",9,27.07,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34F N157W K198G",3
"lib2","SARS-CoV-2","GGACCATACTACAAAT",9,0.14,NA,NA,NA,NA,NA,NA,"stop","T15Y S69M L122* S184I",4
"lib2","SARS-CoV-2","GGACCATAGTCTAACA",5,58.63,10.07,-0.77,0.12,2.46,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGACCATCCCATGGAC",1,0.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","GGACCATGTCTCATAG",3,0.66,NA,NA,NA,NA,NA,NA,"stop","V11P W23* T140I",3
"lib2","SARS-CoV-2","GGACCATTGTAATGAG",8,90.9,8.73,-2.1,0.08,2.9,1.1,0,">1 nonsynonymous","T46A Q168D",2
"lib2","SARS-CoV-2","GGACCATTGTATAAAA",5,1.04,NA,NA,NA,NA,NA,NA,"stop","L95* A105N",2
"lib2","SARS-CoV-2","GGACCCAATCTTCTAC",28,95.76,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1L V20R D98F",3
"lib2","SARS-CoV-2","GGACCCAATGGAAAAT",5,2.04,NA,NA,NA,NA,NA,NA,"stop","A81D N171*",2
"lib2","SARS-CoV-2","GGACCCACAAATCAGT",3,22.93,9.32,-1.52,0.16,2.02,1.15,0.01,">1 nonsynonymous","N30V G83S",2
"lib2","SARS-CoV-2","GGACCCAGACGCACTT",9,29.14,6,-4.84,2,1.5,1.18,0.03,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","GGACCCAGACTGCAAT",10,164.08,10.56,-0.27,0.03,2.94,1.05,0,">1 nonsynonymous","F17W F44H A67L T201K",4
"lib2","SARS-CoV-2","GGACCCAGACTTACTA",7,1.78,NA,NA,NA,NA,NA,NA,"stop","G101T Y121*",2
"lib2","SARS-CoV-2","GGACCCATCTGACTGT",17,164.52,8.82,-2.02,0.33,1.5,1,0.04,">1 nonsynonymous","E10S F44I T100R R136D",4
"lib2","SARS-CoV-2","GGACCCATGGATGCAT",7,90.63,10.8,-0.04,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GGACCCCAATAAACCG",10,182.41,9.35,-1.49,0.06,2.03,1.07,0,">1 nonsynonymous","I2A F8L V65K V173G",4
"lib2","SARS-CoV-2","GGACCCCAATTAGAAA",8,147.06,10.87,0.04,0.04,2.95,1.07,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","GGACCCCTAGGAACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* R16* V103L T201S",4
"lib2","SARS-CoV-2","GGACCCGTAATAAAAA",3,38.62,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R127L N157Y K198T",3
"lib2","SARS-CoV-2","GGACCCGTCGATTAAG",1,13.52,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","GGACCCTAATCTACCT",7,38.67,6.03,-4.8,0.65,1.5,1.18,0.01,">1 nonsynonymous","P82V P133L",2
"lib2","SARS-CoV-2","GGACCCTACATTAAAT",2,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73M A89R",2
"lib2","SARS-CoV-2","GGACCCTCGTAATAGG",1,16.96,8.32,-2.52,0.15,3,1.11,0.01,">1 nonsynonymous","E10V C61R F126A",3
"lib2","SARS-CoV-2","GGACCCTTCCCCCAAA",7,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24L I88T F126L",3
"lib2","SARS-CoV-2","GGACCCTTTAATAACA",1,19.62,10.85,0.02,0.1,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCGAATGAAAGTT",3,1.75,NA,NA,NA,NA,NA,NA,"stop","L125* T170H",2
"lib2","SARS-CoV-2","GGACCGAATTTTCTGC",3,17.06,7.66,-3.18,0.32,1.61,1.17,0.03,">1 nonsynonymous","A22T I88T",2
"lib2","SARS-CoV-2","GGACCGACAGCTGTAA",15,123.13,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","E10I D97G Y165R",3
"lib2","SARS-CoV-2","GGACCGAGTAAGCTAG",9,77.82,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4L F99S Y119I N151L",4
"lib2","SARS-CoV-2","GGACCGATCTCTTCAA",1,13.59,10.75,-0.08,0.13,2.89,1.15,0.01,"1 nonsynonymous","N64M",1
"lib2","SARS-CoV-2","GGACCGCACTCTAGCG",18,312.9,10.82,-0.02,0.03,2.98,1.03,0,"1 nonsynonymous","N58P",1
"lib2","SARS-CoV-2","GGACCGCACTGTTACA",3,25.93,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","V71G G86F N107T",3
"lib2","SARS-CoV-2","GGACCGCATCTGTGCC",3,0.72,NA,NA,NA,NA,NA,NA,"stop","V37* G83F",2
"lib2","SARS-CoV-2","GGACCGCATGAGTTAT",8,0.3,NA,NA,NA,NA,NA,NA,"stop","Y39V C61* V115Q",3
"lib2","SARS-CoV-2","GGACCGGCGAGTTTGA",7,152.89,10.91,0.07,0.06,2.92,1.08,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","GGACCGGTCACCACCT",4,36.56,10.83,-0.01,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCGTACACGTCAT",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y T46F C102A N130Y I142T",5
"lib2","SARS-CoV-2","GGACCTAAAATATGAT",3,33.12,6,-4.84,1.63,1.5,1.15,0.02,">1 nonsynonymous","Y123V D137H G166R T201V",4
"lib2","SARS-CoV-2","GGACCTAAATCAGATT",3,43.61,9.77,-1.06,0.08,2.73,1.02,0,">1 nonsynonymous","C31W P149L",2
"lib2","SARS-CoV-2","GGACCTAATAAAGATT",4,85.33,10.55,-0.29,0.05,2.97,1.02,0,">1 nonsynonymous","A22E T55Y F156W",3
"lib2","SARS-CoV-2","GGACCTAATGAAACTT",2,8.79,8.88,-1.95,0.21,1.78,1.12,0.01,"1 nonsynonymous","P82C",1
"lib2","SARS-CoV-2","GGACCTACGAAGGAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","S129C E135* P169S",3
"lib2","SARS-CoV-2","GGACCTACGTACGACG",8,0.02,NA,NA,NA,NA,NA,NA,"stop","A33V V37* T100N",3
"lib2","SARS-CoV-2","GGACCTACGTGTCTGG",5,43.96,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12T L38T K87G V103Q P149N",5
"lib2","SARS-CoV-2","GGACCTAGCAGGTACT",15,56.18,6,-4.84,1.83,1.5,1.17,0.02,">1 nonsynonymous","N64R G86P K94Q N120H Q144S",5
"lib2","SARS-CoV-2","GGACCTATCAAAAGTG",4,79.48,10.52,-0.32,0.04,2.98,1.03,0,"1 nonsynonymous","N58I",1
"lib2","SARS-CoV-2","GGACCTCAAAGAGATT",18,247.27,10.84,0,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCTCCCATCCATT",1,10.21,9.78,-1.06,0.38,2.26,1.02,0.05,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","GGACCTCCCATTAACA",2,5.73,8.63,-2.21,0.19,1.97,1,0.01,"1 nonsynonymous","F12P",1
"lib2","SARS-CoV-2","GGACCTCTAAATAAAG",1,25.82,10.68,-0.16,0.05,3,1.02,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","GGACCTGAGATCAAAT",5,41.32,10.75,-0.09,0.05,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACCTGCATGGGTAA",6,104.45,10.72,-0.12,0.06,2.86,1.13,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","GGACCTTAAGGTACAC",10,43.79,9.23,-1.61,0.15,1.6,1.08,0.01,">1 nonsynonymous","W106V K128L",2
"lib2","SARS-CoV-2","GGACCTTACTTAATAC",2,14.95,9.76,-1.08,0.2,1.87,1.02,0.02,">1 nonsynonymous","N40L E135I",2
"lib2","SARS-CoV-2","GGACCTTATTGAGACT",2,36.82,9.04,-1.8,0.22,1.78,1.13,0.02,">1 nonsynonymous","V37P I88M E141R",3
"lib2","SARS-CoV-2","GGACCTTCATAAAATG",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E G51D V65A P96L S113Y T201S",6
"lib2","SARS-CoV-2","GGACCTTGAACGTCCC",11,10.37,NA,NA,NA,NA,NA,NA,"stop","S19* A33H T55M",3
"lib2","SARS-CoV-2","GGACCTTGCTCGACGG",4,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V T100Y P133L G155R",4
"lib2","SARS-CoV-2","GGACGAAAAATGATCT",1,14,10.28,-0.55,0.06,2.9,1,0,">1 nonsynonymous","F44K T63Q",2
"lib2","SARS-CoV-2","GGACGAAAGAACATAT",2,15.48,9.08,-1.75,0.3,1.56,1.05,0.03,">1 nonsynonymous","Q84H R127N",2
"lib2","SARS-CoV-2","GGACGAAAGATAGTTG",4,35.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Q84L T100P",2
"lib2","SARS-CoV-2","GGACGAAATATACACT",3,3.37,NA,NA,NA,NA,NA,NA,"stop","F17S R27* T55F Y119V K132V Y165S",6
"lib2","SARS-CoV-2","GGACGAACACATTGTT",4,13.37,10.24,-0.6,0.12,1.99,1.05,0.01,">1 nonsynonymous","N4S C49V N171Y T201L",4
"lib2","SARS-CoV-2","GGACGAACCAAGATAC",5,92.88,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K114F R179A",2
"lib2","SARS-CoV-2","GGACGAACTCTAATTG",4,37.33,10.57,-0.27,0.05,2.86,1.11,0,">1 nonsynonymous","F134L N151K",2
"lib2","SARS-CoV-2","GGACGAACTGGAAATT",2,6.63,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y50A Y66P",2
"lib2","SARS-CoV-2","GGACGAAGCCAGACCA",14,154.13,10.61,-0.22,0.05,2.87,1.09,0,"1 nonsynonymous","A22F",1
"lib2","SARS-CoV-2","GGACGAATTACAGGAG",11,88.77,8.66,-2.17,0.15,1.5,1.1,0.01,">1 nonsynonymous","N64I F99V T201F",3
"lib2","SARS-CoV-2","GGACGACAAATCAGGG",4,81,10.82,-0.01,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGACATCAGGGAG",5,145.99,10.86,0.02,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGACCCGTGAGTA",3,38.47,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L38Y G51F R136S G152I",4
"lib2","SARS-CoV-2","GGACGAGGGTGAAAAA",4,1.78,NA,NA,NA,NA,NA,NA,"stop","D59T G74L K114W L122* Y175*",5
"lib2","SARS-CoV-2","GGACGAGGTAACCTAT",3,8.39,6.91,-3.93,0.13,1.92,1.02,0,">1 nonsynonymous","L5I L38A D97I G155A F185G",5
"lib2","SARS-CoV-2","GGACGAGTGCATTGTA",2,23.27,10.83,0,0.07,2.92,1.09,0,"1 nonsynonymous","D59K",1
"lib2","SARS-CoV-2","GGACGATAAACTCATA",6,79.75,10.23,-0.61,0.03,2.95,1.01,0,">1 nonsynonymous","G116E T148P",2
"lib2","SARS-CoV-2","GGACGATAATATTTCT",5,48.33,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S36M S41V F99N N118S",4
"lib2","SARS-CoV-2","GGACGATACAAAAACC",1,15.95,9.93,-0.91,0.16,2.84,1.11,0.01,">1 nonsynonymous","C6S Y35F N120F I142V K199Q",5
"lib2","SARS-CoV-2","GGACGATACCGGCTAC",9,20.6,6,-4.84,2,1.5,1.38,0.04,">1 nonsynonymous","N92Q C102S E154D P197A",4
"lib2","SARS-CoV-2","GGACGATACTGGGCAT",5,66.63,9.35,-1.49,0.09,1.73,1.06,0,">1 nonsynonymous","N24T T85I A105F",3
"lib2","SARS-CoV-2","GGACGATCTATCGATC",4,41.65,10.51,-0.33,0.05,2.97,1.01,0,"1 nonsynonymous","R136M",1
"lib2","SARS-CoV-2","GGACGATGGCCCAACG",3,18.26,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C102K Y119I",2
"lib2","SARS-CoV-2","GGACGATTATTGAACC",4,49.23,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L5W N40F F44W A81D F134L Y165I T201Q",7
"lib2","SARS-CoV-2","GGACGCAAAAGCGTAT",4,32.61,10.77,-0.07,0.07,2.84,1.16,0,"1 nonsynonymous","T63Y",1
"lib2","SARS-CoV-2","GGACGCAAACTACGTC",15,141.15,10.83,-0.01,0.03,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGCAAGCGAATTA",7,78.43,7.68,-3.16,0.42,1.5,1,0.07,">1 nonsynonymous","Y35H T63I A105Q",3
"lib2","SARS-CoV-2","GGACGCAATAATCTTA",3,10.2,10.09,-0.75,0.17,2.35,1.02,0.01,">1 nonsynonymous","A33L A81V A105S",3
"lib2","SARS-CoV-2","GGACGCACCTTTATCC",7,2.18,NA,NA,NA,NA,NA,NA,"stop","T63K A89F P96*",3
"lib2","SARS-CoV-2","GGACGCACGAACTAGA",1,36.13,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F44N L95K",2
"lib2","SARS-CoV-2","GGACGCACGCACAGAA",9,112.87,10.59,-0.25,0.04,2.9,1.11,0,">1 nonsynonymous","A14N Y35I C61M K198T",4
"lib2","SARS-CoV-2","GGACGCATGTCCAAGC",3,130.57,10.65,-0.19,0.02,2.95,1.06,0,">1 nonsynonymous","N64V G83N D90R L122A",4
"lib2","SARS-CoV-2","GGACGCCATTACTATA",4,44.4,10.59,-0.25,0.05,2.92,1.07,0,">1 nonsynonymous","S41N V115A P169T",3
"lib2","SARS-CoV-2","GGACGCCTTAACTAAT",10,158.78,10.56,-0.28,0.04,2.87,1.04,0,">1 nonsynonymous","S41N V52E",2
"lib2","SARS-CoV-2","GGACGCGAAAAATCCT",2,25.94,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","K94R D112M F134R N157C",4
"lib2","SARS-CoV-2","GGACGCGTGAAGTTTG",6,35.46,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12T R27E D68T F126T",4
"lib2","SARS-CoV-2","GGACGCTGAGGTACAA",9,48.39,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","F126N E141F C158W",3
"lib2","SARS-CoV-2","GGACGCTGATGAGCAG",3,51.99,6.47,-4.37,0.27,1.66,1.15,0.01,"1 nonsynonymous","L162G",1
"lib2","SARS-CoV-2","GGACGCTGGGTGCACA",11,219.85,10.87,0.03,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGGAACGTTCGGA",3,71.45,10.68,-0.16,0.04,2.9,1.1,0,">1 nonsynonymous","C61P T201Y",2
"lib2","SARS-CoV-2","GGACGGACGTGAGAAC",15,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77L L95R",2
"lib2","SARS-CoV-2","GGACGGAGGAAAACAG",4,51.6,10.86,0.02,0.06,2.9,1.11,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","GGACGGATATAGGTAT",1,0.65,NA,NA,NA,NA,NA,NA,"stop","R27T Q84G I104W Y143*",4
"lib2","SARS-CoV-2","GGACGGATATCAATAT",2,6.04,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","GGACGGATGGCTGATT",4,4.03,NA,NA,NA,NA,NA,NA,"stop","Y39S G86T Y119* N157K",4
"lib2","SARS-CoV-2","GGACGGATGTTTTCCT",2,5.47,10.8,-0.04,0.08,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGGCGCTATCGGA",8,43.17,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","A81T I88H K94D N107C S139Y V182S",6
"lib2","SARS-CoV-2","GGACGGGAATGTTACA",1,14.22,6.76,-4.08,0.46,1.5,1.15,0.02,">1 nonsynonymous","N4M E10V V37S N107I N151D",5
"lib2","SARS-CoV-2","GGACGGGACACCGGCA",6,25.38,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D34R T46A P96K A190T",4
"lib2","SARS-CoV-2","GGACGGGGTGGTATAT",3,9.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G83N G101T",2
"lib2","SARS-CoV-2","GGACGGTAACATACAA",4,64.03,10.33,-0.51,0.05,2.93,1.05,0,">1 nonsynonymous","E10H T148M",2
"lib2","SARS-CoV-2","GGACGGTAGGCTGTAA",11,2.25,NA,NA,NA,NA,NA,NA,"stop","C6F V173*",2
"lib2","SARS-CoV-2","GGACGGTGTATATCCA",2,58.13,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R27L Y39M A81P K94L",4
"lib2","SARS-CoV-2","GGACGTAAACCAACAG",6,107.26,10.74,-0.1,0.04,2.94,1.07,0,">1 nonsynonymous","I2Q T63G",2
"lib2","SARS-CoV-2","GGACGTAAATTCTAGA",4,129.8,10.76,-0.08,0.04,2.97,1.04,0,">1 nonsynonymous","R27S K132R",2
"lib2","SARS-CoV-2","GGACGTAACGGTGGCA",4,3.74,NA,NA,NA,NA,NA,NA,"stop","S129* P149M V173A",3
"lib2","SARS-CoV-2","GGACGTACAAATAATA",3,44.63,9.41,-1.42,0.07,1.94,1,0,">1 nonsynonymous","F12E S36Q N110S",3
"lib2","SARS-CoV-2","GGACGTACTCATTCTG",3,15.76,9.38,-1.46,0.11,2.71,1.1,0,">1 nonsynonymous","T3S K87E S184L",3
"lib2","SARS-CoV-2","GGACGTAGGTGTCTGA",4,26.3,8.85,-1.98,0.1,3,1.05,0,">1 nonsynonymous","N157H V194I",2
"lib2","SARS-CoV-2","GGACGTCCAGCTGACC",6,77.24,7.72,-3.12,0.42,1.5,1,0.07,">1 nonsynonymous","P82L D98Y R124D",3
"lib2","SARS-CoV-2","GGACGTCGCAATGTAT",2,29.03,6,-4.84,2,1.5,1.24,0.04,"1 nonsynonymous","C49G",1
"lib2","SARS-CoV-2","GGACGTCTAGACCAAT",5,46.42,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","V77T N92S S113L R136Y T201N",5
"lib2","SARS-CoV-2","GGACGTGAGTGAGACA",6,190.82,10.86,0.03,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACGTGCCACAGGCT",2,1.26,NA,NA,NA,NA,NA,NA,"stop","V37* V182Y",2
"lib2","SARS-CoV-2","GGACGTGCTTTACTAA",7,61.7,10.25,-0.58,0.04,3,1,0,">1 nonsynonymous","N4C E154P",2
"lib2","SARS-CoV-2","GGACGTTAAACTATTG",6,87,6.2,-4.63,0.67,1.5,1.21,0.02,">1 nonsynonymous","T15C G83Y P177V A190E",4
"lib2","SARS-CoV-2","GGACGTTAACTTGTAC",3,44.71,10.71,-0.13,0.06,2.95,1.07,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","GGACGTTACGGAGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","S53P G74* D112Q R179V",4
"lib2","SARS-CoV-2","GGACGTTCAAAAGCAA",7,116.27,6.04,-4.8,0.69,1.5,1.1,0.01,">1 nonsynonymous","N118E F167M",2
"lib2","SARS-CoV-2","GGACGTTGTGCACATC",2,0.71,NA,NA,NA,NA,NA,NA,"stop","L5P K56V R124V R136*",4
"lib2","SARS-CoV-2","GGACGTTGTTAAAAGA",5,0.69,NA,NA,NA,NA,NA,NA,"stop","S19L G51* D98K",3
"lib2","SARS-CoV-2","GGACGTTTATTCAGTA",3,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T Q84K S139V",3
"lib2","SARS-CoV-2","GGACTAAAATTGACAT",2,46.68,9.01,-1.82,0.07,2.95,1.07,0,">1 nonsynonymous","V115A A145L G152N",3
"lib2","SARS-CoV-2","GGACTAAACAGATTTT",6,24.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29A L38M V103Q",3
"lib2","SARS-CoV-2","GGACTAAGTTTCATAA",10,134.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S41Y Y159D G166T P197Q",4
"lib2","SARS-CoV-2","GGACTAATGGATTTGG",10,118.67,10.8,-0.04,0.04,2.87,1.14,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","GGACTAATTTTCGGCC",10,81.69,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19V G86P P96L N118S",4
"lib2","SARS-CoV-2","GGACTACACCACATAA",3,21.43,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N64T R73E A81D F167Y",4
"lib2","SARS-CoV-2","GGACTACACGCCGGTT",5,71.87,10.22,-0.62,0.07,2.6,1.04,0,">1 nonsynonymous","T3I Q84Y",2
"lib2","SARS-CoV-2","GGACTACACTCCATCA",6,0.94,NA,NA,NA,NA,NA,NA,"stop","C61* P96S",2
"lib2","SARS-CoV-2","GGACTACCAGTCTAAC",3,17.2,6,-4.84,2,1.5,1.02,0.07,">1 nonsynonymous","I2N F44N D68R P82I I104S L131E A145Y P149R",8
"lib2","SARS-CoV-2","GGACTACGAAGATGTA",5,174.86,10.93,0.09,0.05,2.96,1.05,0,">1 nonsynonymous","P149A V173L",2
"lib2","SARS-CoV-2","GGACTACGAGACTATT",13,98.51,6.19,-4.64,0.72,1.78,1.2,0.01,">1 nonsynonymous","Q84P Y123I",2
"lib2","SARS-CoV-2","GGACTACGGAGCGGAA",11,66.79,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V37E S53A V115C N157Y G166I A190E",6
"lib2","SARS-CoV-2","GGACTACGGCTTCTGC",4,75.1,10.18,-0.66,0.05,2.79,1.04,0,">1 nonsynonymous","G83V T140E",2
"lib2","SARS-CoV-2","GGACTACTAATATAAC",1,25.73,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F12S S36I G51S N58C A105N E141I",6
"lib2","SARS-CoV-2","GGACTACTTGAGACAG",10,27.54,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","P7N F17Y C61T F70M G174E E186I",6
"lib2","SARS-CoV-2","GGACTAGAACTCAATT",10,31.33,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V103S Y119S",2
"lib2","SARS-CoV-2","GGACTAGAAGACCTAT",7,111.78,10.85,0.01,0.04,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGACTAGATATTGCCC",8,80,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C6S I28G T140P",3
"lib2","SARS-CoV-2","GGACTAGCAAAAATGA",7,3.19,NA,NA,NA,NA,NA,NA,"stop","V11* P96T D112V",3
"lib2","SARS-CoV-2","GGACTAGCCTAATTTT",9,40.58,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","N118T V182Y",2
"lib2","SARS-CoV-2","GGACTAGCGATAACAT",2,27.8,9.34,-1.5,0.22,1.62,1.13,0.03,">1 nonsynonymous","A22T R27G T55D V65S",4
"lib2","SARS-CoV-2","GGACTAGTAGGAATCA",3,27.65,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I104S G172L",2
"lib2","SARS-CoV-2","GGACTAGTCAAGATCT",8,36.62,9.01,-1.82,0.36,1.5,1,0.05,">1 nonsynonymous","Y50S C61W",2
"lib2","SARS-CoV-2","GGACTATAATCAATCA",2,13.01,9.36,-1.48,0.1,2.77,1.16,0.01,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","GGACTATATAACTTGG",2,5.77,6.49,-4.34,0.75,3,1,0.01,">1 nonsynonymous","V77A N107Y S184K S200T",4
"lib2","SARS-CoV-2","GGACTATCAGTAATCA",1,50.88,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39V L95P V103C",3
"lib2","SARS-CoV-2","GGACTATCATAAAAAG",4,54.69,9.75,-1.08,0.06,2.47,1.05,0,"1 nonsynonymous","V11P",1
"lib2","SARS-CoV-2","GGACTATCGAGATAAA",15,63.21,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S53A G101C Y121N",3
"lib2","SARS-CoV-2","GGACTATTTAAATTGA",2,56.69,9.82,-1.02,0.12,2.4,1.07,0.01,">1 nonsynonymous","C6D L60P",2
"lib2","SARS-CoV-2","GGACTCACCCGGCGCT",6,1.03,NA,NA,NA,NA,NA,NA,"stop","D34A L95Y T100* Q144C",4
"lib2","SARS-CoV-2","GGACTCAGTTTCTACC",4,17.64,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G83C I88L A105T L131R F185V",5
"lib2","SARS-CoV-2","GGACTCATGACTTTTA",3,29.29,8.97,-1.87,0.09,1.93,1.08,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","GGACTCCACATTGCAG",2,22.49,10.91,0.08,0.12,2.94,1.07,0,">1 nonsynonymous","P54E T148R",2
"lib2","SARS-CoV-2","GGACTCCACCCAGTCA",1,52.17,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L57V L95F Q168P",3
"lib2","SARS-CoV-2","GGACTCCATACTAGAG",6,35.25,10.61,-0.23,0.08,2.91,1.04,0,">1 nonsynonymous","K114F L187H",2
"lib2","SARS-CoV-2","GGACTCCCATCGGCGC",12,194.31,10.32,-0.52,0.03,2.91,1.02,0,">1 nonsynonymous","I104M E141C K199W",3
"lib2","SARS-CoV-2","GGACTCCTATTGAATA",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77T Y119W T140L A192F",4
"lib2","SARS-CoV-2","GGACTCGCACTCCGTG",1,34.66,9.1,-1.74,0.17,1.82,1.08,0.01,">1 nonsynonymous","N1S G51P",2
"lib2","SARS-CoV-2","GGACTCGTCTTCGTTT",1,8.53,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","G101Q E154Q Y165L T170P",4
"lib2","SARS-CoV-2","GGACTCTAGGTGGAAA",3,157.51,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L60M D90F D112N F167S",4
"lib2","SARS-CoV-2","GGACTCTCAATTTAAG",1,29.59,9.86,-0.98,0.11,2.17,1.03,0.01,">1 nonsynonymous","L38S K198R",2
"lib2","SARS-CoV-2","GGACTCTCCACAGAGC",1,92.44,8.75,-2.08,0.07,2.82,1.05,0,">1 nonsynonymous","L5N V37C F44Q F156G",4
"lib2","SARS-CoV-2","GGACTCTTCATCGGCA",3,3.54,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGACTCTTGCTACTTC",3,87.22,10.73,-0.11,0.05,2.86,1.1,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","GGACTGACAAAGCGAC",6,44.85,9.58,-1.25,0.18,1.64,1.15,0.02,">1 nonsynonymous","S41F W106N",2
"lib2","SARS-CoV-2","GGACTGATCTTACAAC",3,104.97,6,-4.84,0.52,2.78,1.15,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GGACTGCGATTAGAGC",13,165.36,8.74,-2.1,0.05,2.87,1.06,0,"1 nonsynonymous","N171R",1
"lib2","SARS-CoV-2","GGACTGCGCTACACGC",1,0.1,NA,NA,NA,NA,NA,NA,"stop","F17K C61W S69* E141N",4
"lib2","SARS-CoV-2","GGACTGGAGTCACTAA",12,182.65,10.97,0.14,0.06,2.93,1.06,0,">1 nonsynonymous","V37W S200L",2
"lib2","SARS-CoV-2","GGACTGGCCTAATGAG",3,4.72,NA,NA,NA,NA,NA,NA,"stop","V11L Q79S D112Y Y175*",4
"lib2","SARS-CoV-2","GGACTGGTGAGAAGGA",7,86.47,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86W G116C G146T",3
"lib2","SARS-CoV-2","GGACTGTACGTTATAT",8,43.1,6.75,-4.08,0.45,1.5,1.2,0.04,">1 nonsynonymous","S41Y P82L T100K G146T",4
"lib2","SARS-CoV-2","GGACTGTATATGAATG",2,46.47,6,-4.84,1.52,3,1.18,0,">1 nonsynonymous","Y121S Y175E",2
"lib2","SARS-CoV-2","GGACTGTATGGGTGCA",4,29.25,10.67,-0.17,0.09,2.94,1.11,0,">1 nonsynonymous","D98S T201D",2
"lib2","SARS-CoV-2","GGACTGTCAAAACATG",2,31.6,10.73,-0.11,0.07,2.92,1.09,0,">1 nonsynonymous","Y39S K132L",2
"lib2","SARS-CoV-2","GGACTGTCTAAACTAT",2,1.76,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGACTGTTATGGCAAA",2,6.89,10.06,-0.77,0.22,2.36,1,0.02,">1 nonsynonymous","N4P F44Q Q84S P149L",4
"lib2","SARS-CoV-2","GGACTGTTTTGACTAA",3,26.32,10.65,-0.19,0.05,3,1,0,">1 nonsynonymous","I2S S41I",2
"lib2","SARS-CoV-2","GGACTTAAAGACCCAT",2,12.43,10.87,0.03,0.12,2.9,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGACTTAACGAACGAG",3,40.42,9.01,-1.83,0.07,2.94,1.03,0,">1 nonsynonymous","Y119V E141A",2
"lib2","SARS-CoV-2","GGACTTAGCGGATGGA",5,102.05,8.51,-2.32,0.25,1.5,1,0.03,">1 nonsynonymous","A14G V37F V103C",3
"lib2","SARS-CoV-2","GGACTTAGTGGTATTA",6,74.89,9.84,-1,0.07,2.33,1.07,0,">1 nonsynonymous","N58F N109I",2
"lib2","SARS-CoV-2","GGACTTATGACAACCG",12,113.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33P G74F I88N K132A N157S",5
"lib2","SARS-CoV-2","GGACTTCAACAACTGA",3,37.66,6,-4.84,1.69,1.5,1.16,0.03,">1 nonsynonymous","V37I G74K Q144L",3
"lib2","SARS-CoV-2","GGACTTCAACCACACA",5,33.52,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T15G Y21I Y50L F99D V103Y N109Q",6
"lib2","SARS-CoV-2","GGACTTCACCTAAGAC",3,60.64,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S36L T46N C61S S113R Y159K",5
"lib2","SARS-CoV-2","GGACTTCTTACAAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","A22V V37* F134R",3
"lib2","SARS-CoV-2","GGACTTGCAAACGGTA",1,1.15,NA,NA,NA,NA,NA,NA,"stop","S53* S200V",2
"lib2","SARS-CoV-2","GGACTTGCGCTGACAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167M",1
"lib2","SARS-CoV-2","GGACTTGTATTCGAAT",7,69.6,8.41,-2.43,0.11,1.5,1.02,0.01,">1 nonsynonymous","A89K K128E",2
"lib2","SARS-CoV-2","GGACTTGTGAACGACT",4,75.78,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","E10H A18Q Y39V F62S G86D K128P",6
"lib2","SARS-CoV-2","GGACTTTATATATGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","P82* K87V D98E S113A K128L",5
"lib2","SARS-CoV-2","GGACTTTCAATAGGCC",11,132.44,6,-4.84,2,1.5,1.32,0.02,">1 nonsynonymous","T3I Y35A D112N G172V",4
"lib2","SARS-CoV-2","GGACTTTGGGATCGGG",7,74.27,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36R L95R A105F G146V Q163V S184T",6
"lib2","SARS-CoV-2","GGAGAAAAAATGAAAA",7,25.22,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","V103D",1
"lib2","SARS-CoV-2","GGAGAAAATACTGTTA",1,10.19,6,-4.83,1.6,1.5,1.13,0.05,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","GGAGAAACAAAAGAGA",9,126.82,10.12,-0.72,0.03,2.83,1.02,0,">1 nonsynonymous","T15H V173G",2
"lib2","SARS-CoV-2","GGAGAAACAATCCAGA",2,8.44,10.74,-0.1,0.07,3,1.01,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","GGAGAAACGAATTGTT",4,26.65,6,-4.84,1.67,3,1.16,0.02,">1 nonsynonymous","S36H C49K C61A W106L P161S",5
"lib2","SARS-CoV-2","GGAGAAACGCCTATTA",9,149.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83Q F99S",2
"lib2","SARS-CoV-2","GGAGAAACTGGCAAGT",2,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L D90G R127Q",3
"lib2","SARS-CoV-2","GGAGAAAGATTATCTG",7,83.18,8.49,-2.35,0.08,1.79,1.08,0,">1 nonsynonymous","F17R T100V G155D",3
"lib2","SARS-CoV-2","GGAGAACAGACAAACC",11,136.5,6.05,-4.79,0.65,1.5,1.15,0.01,"1 nonsynonymous","C158D",1
"lib2","SARS-CoV-2","GGAGAACAGCATCCCG",3,0,NA,NA,NA,NA,NA,NA,"stop","T15Q V20Y C61* D90N I104D N120Y T201Q",7
"lib2","SARS-CoV-2","GGAGAACCGGTTGCCT",3,53.93,9.91,-0.93,0.07,2.47,1.1,0,">1 nonsynonymous","A105C Q168R",2
"lib2","SARS-CoV-2","GGAGAACTAATCGAGG",5,43.66,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S69V R73V T85F A105C Y123I",5
"lib2","SARS-CoV-2","GGAGAACTCCTTAATC",5,88.38,10.78,-0.06,0.05,2.87,1.14,0,"1 nonsynonymous","Q163H",1
"lib2","SARS-CoV-2","GGAGAAGCACCATTCA",3,19.1,7.55,-3.28,0.49,1.5,1.19,0.06,">1 nonsynonymous","K56H D90C A105R N118S",4
"lib2","SARS-CoV-2","GGAGAAGGACCGTCCC",10,67.98,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","R127I L162K",2
"lib2","SARS-CoV-2","GGAGAAGTATACCAGT",6,119.88,10.85,0.01,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGAAGTGAAACAGT",6,55.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19L C61S D112Q G196R",4
"lib2","SARS-CoV-2","GGAGAATAAATACTGA",2,0,NA,NA,NA,NA,NA,NA,"stop","A18* R25K S41T F99D N118T G146A",6
"lib2","SARS-CoV-2","GGAGAATAAGGGAATA",8,91.33,10.83,-0.01,0.05,2.99,1.01,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","GGAGAATACAACAAAA",1,8.28,6,-4.84,1.8,3,1.2,0.01,">1 nonsynonymous","A33M I88N L95S K114L",4
"lib2","SARS-CoV-2","GGAGAATCAAAAGGTT",16,146.19,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F44N G51Y P169I T201M",4
"lib2","SARS-CoV-2","GGAGAATCCATGGCCA",5,52.33,9.16,-1.68,0.11,1.64,1.1,0.01,">1 nonsynonymous","L57W Y66F P161S",3
"lib2","SARS-CoV-2","GGAGAATCCGTAAACG",8,69.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R25L R73T S147F",3
"lib2","SARS-CoV-2","GGAGAATGAGCGGTTA",3,58.66,8.66,-2.18,0.14,2.84,1.03,0.01,">1 nonsynonymous","L38Y K87R Y119M",3
"lib2","SARS-CoV-2","GGAGACAAAGATCTTA",5,89.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61D S108T Y159M F167D Y175A",5
"lib2","SARS-CoV-2","GGAGACAAAGGTAGAC",2,55.73,10.3,-0.53,0.04,2.91,1.04,0,">1 nonsynonymous","S41L P149W",2
"lib2","SARS-CoV-2","GGAGACACTATATACC",4,43.32,9.43,-1.41,0.06,2.34,1.03,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","GGAGACATAGTACATA",7,59.41,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F99A Y123Q L162E",3
"lib2","SARS-CoV-2","GGAGACCAAATTGATG",7,109.75,10.2,-0.63,0.04,2.86,1.09,0,">1 nonsynonymous","G83A L125F S200R",3
"lib2","SARS-CoV-2","GGAGACCCGTGACACG",4,0.96,NA,NA,NA,NA,NA,NA,"stop","G9W Q84* N120L R127K T201*",5
"lib2","SARS-CoV-2","GGAGACCCGTTATACT",16,127.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L57T N64L A81F T148P G155F",5
"lib2","SARS-CoV-2","GGAGACCTTGAGGAAC",1,10.64,9.5,-1.34,0.17,1.72,1.05,0.01,"1 nonsynonymous","I28R",1
"lib2","SARS-CoV-2","GGAGACCTTTTTATAT",7,189.68,10.32,-0.51,0.03,2.98,1.03,0,">1 nonsynonymous","K87A K132M G196E",3
"lib2","SARS-CoV-2","GGAGACGATCTAAACC",10,229.11,10.58,-0.25,0.04,2.95,1.03,0,">1 nonsynonymous","F62Q H189S",2
"lib2","SARS-CoV-2","GGAGACGCCACCGGGG",3,52.7,9.55,-1.28,0.14,2.09,1.04,0.01,">1 nonsynonymous","L95T N120A",2
"lib2","SARS-CoV-2","GGAGACGCGTATGCAA",8,78.87,10.3,-0.53,0.05,2.77,1.13,0,">1 nonsynonymous","A18M R27A",2
"lib2","SARS-CoV-2","GGAGACGCGTTCACAA",2,13.15,10.74,-0.1,0.06,3,1.01,0,"1 nonsynonymous","N64W",1
"lib2","SARS-CoV-2","GGAGACTAAAAGGACA",4,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55I L95R",2
"lib2","SARS-CoV-2","GGAGACTCTACTAACC",5,48.97,8.44,-2.39,0.13,1.92,1.12,0.01,">1 nonsynonymous","D34S P177S",2
"lib2","SARS-CoV-2","GGAGAGAAATACTAAC",7,51.28,9.88,-0.96,0.22,1.5,1,0.02,">1 nonsynonymous","N4T A14C C61L T100E",4
"lib2","SARS-CoV-2","GGAGAGAGCAATCAAA",19,250.71,10.86,0.03,0.05,2.93,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GGAGAGATATGGTAAC",2,60.48,10.67,-0.17,0.04,2.98,1.05,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","GGAGAGCACTCAAAGG",2,39.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S41L I142S Y175S V180M",4
"lib2","SARS-CoV-2","GGAGAGCCCCATCGAC",1,11.56,8.1,-2.73,0.56,1.5,1,0.07,">1 nonsynonymous","T100P G155S",2
"lib2","SARS-CoV-2","GGAGAGCTAAGACCGA",6,25.67,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","P82Y Y91E",2
"lib2","SARS-CoV-2","GGAGAGGACAAGCCTA",3,48.5,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y121S S139E Y165S N171K",4
"lib2","SARS-CoV-2","GGAGAGGAGAGAATGC",7,258.21,10.75,-0.09,0.05,2.91,1.08,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","GGAGAGGAGATGTGAA",4,22.73,9.51,-1.33,0.13,2.86,1.06,0.01,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","GGAGAGGATGCAGGAC",6,63.42,6.62,-4.22,0.45,1.5,1.19,0.03,">1 nonsynonymous","P96Q W106R",2
"lib2","SARS-CoV-2","GGAGAGGGCATAAATT",5,38.94,9.51,-1.33,0.1,1.92,1.08,0,">1 nonsynonymous","N13M A105Y",2
"lib2","SARS-CoV-2","GGAGAGTAACAAAGCT",1,23.43,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","C61R D97I G101F",3
"lib2","SARS-CoV-2","GGAGAGTCATCACACA",7,53.12,10.27,-0.57,0.06,2.92,1.04,0,">1 nonsynonymous","R78C R136V V173L",3
"lib2","SARS-CoV-2","GGAGATATAAGAGTGT",7,81.56,8.42,-2.42,0.14,3,1.06,0.01,">1 nonsynonymous","C61F G166D",2
"lib2","SARS-CoV-2","GGAGATATACTCTTCG",3,26.16,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","C31K T55Y T63F R78L D90I",5
"lib2","SARS-CoV-2","GGAGATATATGTAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T G83S T148L",3
"lib2","SARS-CoV-2","GGAGATATCATCGAAA",7,147.9,10.68,-0.16,0.05,2.89,1.08,0,">1 nonsynonymous","E10S R16T G83S L122R P149L",5
"lib2","SARS-CoV-2","GGAGATATGAGGCACG",4,24.01,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N157M L183R S184A",3
"lib2","SARS-CoV-2","GGAGATCAATCTTAAA",4,101.99,10.16,-0.68,0.03,2.97,1.03,0,">1 nonsynonymous","L60H L125S",2
"lib2","SARS-CoV-2","GGAGATCATAAATGTA",4,16.82,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","R25P V71M S113F S129R Y143V",5
"lib2","SARS-CoV-2","GGAGATCATGCATCTT",1,17.17,9.01,-1.83,0.07,1.95,1,0,">1 nonsynonymous","F17G G116A",2
"lib2","SARS-CoV-2","GGAGATGCCATCGATG",9,159.22,10.79,-0.05,0.05,2.82,1.1,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","GGAGATGCTATATATA",2,40.63,10.78,-0.05,0.11,2.79,1.12,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","GGAGATGGATATGGAG",2,39.21,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F167G T201V",2
"lib2","SARS-CoV-2","GGAGATTATTAGAATA",2,101.77,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","A105R E135V",2
"lib2","SARS-CoV-2","GGAGATTTACTTGTTC",5,1.78,NA,NA,NA,NA,NA,NA,"stop","L5Q N13I I72* P169Y L188P",5
"lib2","SARS-CoV-2","GGAGATTTAGTAAGTT",6,77.44,10.5,-0.34,0.05,2.87,1.06,0,"1 nonsynonymous","N13H",1
"lib2","SARS-CoV-2","GGAGCAAATATGTCCA",3,6.04,11.11,0.27,0.06,3,1.01,0,">1 nonsynonymous","G83N K198Q",2
"lib2","SARS-CoV-2","GGAGCAACCAAAACTA",3,0.04,NA,NA,NA,NA,NA,NA,"stop","A42* V103S N110D N157G",4
"lib2","SARS-CoV-2","GGAGCAACGCTCAGAA",6,49.34,9.12,-1.72,0.13,1.61,1.09,0.01,"1 nonsynonymous","F17K",1
"lib2","SARS-CoV-2","GGAGCAACGGTATTGT",20,290.37,10.31,-0.53,0.02,2.8,1.04,0,">1 nonsynonymous","G9S D34H",2
"lib2","SARS-CoV-2","GGAGCAAGAGTTGGAA",3,60.8,7.05,-3.79,0.41,1.5,1.15,0.04,">1 nonsynonymous","I2D N40D Q84H P96N E141M",5
"lib2","SARS-CoV-2","GGAGCAAGGCAAAACT",13,248.45,10.81,-0.03,0.04,2.9,1.09,0,">1 nonsynonymous","V65M K198S",2
"lib2","SARS-CoV-2","GGAGCAATAATCGTAT",3,14.37,10.66,-0.18,0.12,2.72,1.2,0.01,"1 nonsynonymous","V182I",1
"lib2","SARS-CoV-2","GGAGCAATACAACGTA",12,103.47,10.74,-0.1,0.04,2.93,1.09,0,">1 nonsynonymous","G9Y F44Y",2
"lib2","SARS-CoV-2","GGAGCAATTGTCCCGA",8,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K D112G G146D",3
"lib2","SARS-CoV-2","GGAGCACACGCGAGAA",2,14.82,NA,NA,NA,NA,NA,0.28,"1 nonsynonymous","L95N",1
"lib2","SARS-CoV-2","GGAGCACTTATAAAAA",1,16.26,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F12T K94R R124T P133G",4
"lib2","SARS-CoV-2","GGAGCAGTACCTAAGC",6,0.07,NA,NA,NA,NA,NA,NA,"stop","D59* D90W I138R C150W P197W",5
"lib2","SARS-CoV-2","GGAGCAGTATAGAATT",3,17.81,6,-4.84,2,1.5,1.21,0.06,"1 nonsynonymous","F70R",1
"lib2","SARS-CoV-2","GGAGCAGTTCAAAAAC",1,5.96,10.51,-0.33,0.05,2.98,1.04,0,">1 nonsynonymous","K87H F160W",2
"lib2","SARS-CoV-2","GGAGCATAACATAAAG",4,29,10.28,-0.55,0.06,3,1,0,">1 nonsynonymous","Y35R C61V",2
"lib2","SARS-CoV-2","GGAGCATGTCACTACT",4,15.86,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","L5H A81G N107I L125N P177N",5
"lib2","SARS-CoV-2","GGAGCATTTGATGTGG",3,45.76,10.91,0.08,0.07,2.92,1.1,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GGAGCCACCTCCCTAG",2,18.96,10.86,0.03,0.1,2.68,1.3,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGCCACTAGCTATA",4,53.88,6.34,-4.49,0.33,2.19,1.16,0.01,">1 nonsynonymous","R78P Q168P",2
"lib2","SARS-CoV-2","GGAGCCACTGAAAACA",1,45.66,9.87,-0.97,0.07,2.66,1.07,0,">1 nonsynonymous","R27H R136A",2
"lib2","SARS-CoV-2","GGAGCCATTTTCATTA",6,60.34,10.65,-0.19,0.05,2.91,1.11,0,">1 nonsynonymous","C61D K199I",2
"lib2","SARS-CoV-2","GGAGCCCAAACACATA",1,18.14,10.69,-0.15,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGCCCAGAGGATCA",3,20.79,8.48,-2.36,0.16,2.2,1.09,0.02,">1 nonsynonymous","T3E S53L N107V P191R",4
"lib2","SARS-CoV-2","GGAGCCCCCCACACCA",12,78.16,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83M F99D",2
"lib2","SARS-CoV-2","GGAGCGAACTAGTACA",9,67.77,9.37,-1.47,0.07,2.47,1.03,0,">1 nonsynonymous","S69Q G174R",2
"lib2","SARS-CoV-2","GGAGCGAAGCGAAATT",1,10.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D68R G152F",2
"lib2","SARS-CoV-2","GGAGCGACAATAATTA",3,0,NA,NA,NA,NA,NA,NA,"stop","F44* A105L G152R G174L L188F",5
"lib2","SARS-CoV-2","GGAGCGATGGAAGGAG",6,87.67,10.48,-0.35,0.05,2.99,1.02,0,"1 nonsynonymous","F44Q",1
"lib2","SARS-CoV-2","GGAGCGATTAATCACG",12,50.49,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T100S S129V R136T Y143I T201W",5
"lib2","SARS-CoV-2","GGAGCGCGCACACTAG",7,192.13,9.63,-1.2,0.02,2.91,1.06,0,">1 nonsynonymous","D98E G166V T201D",3
"lib2","SARS-CoV-2","GGAGCGCTAAAAGGCC",3,1.14,NA,NA,NA,NA,NA,NA,"stop","L5S T63Y K94H G146*",4
"lib2","SARS-CoV-2","GGAGCGGACTACCAGT",13,86.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y91K C158K",2
"lib2","SARS-CoV-2","GGAGCGGATTGTACCC",3,35.93,6.98,-3.85,0.36,1.87,1.2,0.03,">1 nonsynonymous","N107F V173Q",2
"lib2","SARS-CoV-2","GGAGCGGGTATGGAAG",3,52.6,10.22,-0.62,0.05,2.96,1.01,0,">1 nonsynonymous","G83S E141A N151S",3
"lib2","SARS-CoV-2","GGAGCGGTCACTAATC",2,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T Y93V F160N",3
"lib2","SARS-CoV-2","GGAGCGGTTCTCTAAT",11,61.54,8.7,-2.14,0.15,1.5,1,0.01,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","GGAGCGTGAATTTATA",20,206.14,10.33,-0.5,0.04,2.92,1.08,0,">1 nonsynonymous","L5G G9T L60A K87F",4
"lib2","SARS-CoV-2","GGAGCTAAAGCCGATT",6,84.43,6.19,-4.65,0.9,1.5,1.19,0.03,">1 nonsynonymous","N13I S53V P82K P133C P169R R179N",6
"lib2","SARS-CoV-2","GGAGCTAACACTAATT",5,80.67,10.7,-0.13,0.03,2.99,1,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","GGAGCTAAGGAATCCG",11,6.68,NA,NA,NA,NA,NA,NA,"stop","T15D V77F T100* N107E",4
"lib2","SARS-CoV-2","GGAGCTACCCCGTCCC",4,184.73,8.54,-2.3,0.11,2.1,1.12,0,">1 nonsynonymous","A18M D97E I142S V153A",4
"lib2","SARS-CoV-2","GGAGCTAGGGACATAT",7,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21D A42N C61W G117L",4
"lib2","SARS-CoV-2","GGAGCTATCAGACAAC",5,95.44,10.93,0.1,0.06,2.83,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGCTCCGCGAACTA",2,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P S41V L60K I104G S129N",5
"lib2","SARS-CoV-2","GGAGCTGAGCAGAAAA",4,65.5,7.6,-3.23,0.2,1.5,1.09,0.01,">1 nonsynonymous","L5I S19T N120P",3
"lib2","SARS-CoV-2","GGAGCTGATCCGGCAA",1,10.67,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","P54S N92M V103C Q144M",4
"lib2","SARS-CoV-2","GGAGCTGCGACAAAGC",17,171.11,10.96,0.12,0.05,2.97,1.05,0,"1 nonsynonymous","F160R",1
"lib2","SARS-CoV-2","GGAGCTGGTTCTTAAG",4,113.21,10.8,-0.04,0.05,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGCTTAACCAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","P82R K94W W106* Y178P",4
"lib2","SARS-CoV-2","GGAGCTTAGCAATTAT",6,78.7,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9R L57R A89C P149L",4
"lib2","SARS-CoV-2","GGAGCTTTAATCCGTG",1,19.94,9.67,-1.17,0.29,1.7,1.05,0.03,">1 nonsynonymous","L95T F156S",2
"lib2","SARS-CoV-2","GGAGGAAACTCGGCAA",2,8.3,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E10T G74F R127S A145T Y175F",5
"lib2","SARS-CoV-2","GGAGGAAAGCTTTATA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117R K132G N151Y",3
"lib2","SARS-CoV-2","GGAGGAATAATGTTAA",5,75.6,10.7,-0.14,0.03,2.88,1.08,0,">1 nonsynonymous","N40D K128L K198L",3
"lib2","SARS-CoV-2","GGAGGACCAAAGACGT",8,1.19,NA,NA,NA,NA,NA,NA,"stop","N30W K48*",2
"lib2","SARS-CoV-2","GGAGGACCCTAGTCTC",2,54.13,9.76,-1.08,0.08,1.97,1.03,0,">1 nonsynonymous","D90S R127K S184A",3
"lib2","SARS-CoV-2","GGAGGAGAGATAAATA",1,10.29,9.2,-1.63,0.1,2.91,1.07,0,">1 nonsynonymous","A22S Y143I",2
"lib2","SARS-CoV-2","GGAGGAGCCATCAATT",5,36.02,9.19,-1.64,0.22,1.5,1,0.03,">1 nonsynonymous","F44S Y91R",2
"lib2","SARS-CoV-2","GGAGGAGGCAGCAGAA",18,306.5,10.21,-0.63,0.02,2.88,1.05,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","GGAGGAGTGATTGGAA",9,42.35,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S41G R73L C158R G166R",4
"lib2","SARS-CoV-2","GGAGGAGTTAATTCTT",3,19.01,6,-4.84,1.7,1.5,1.14,0.03,">1 nonsynonymous","A18C D137Q G152T F167P",4
"lib2","SARS-CoV-2","GGAGGATCAACAATGT",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R P82L G172H",3
"lib2","SARS-CoV-2","GGAGGATGACATGTTT",4,83.29,8.33,-2.5,0.12,2.39,1.1,0.01,">1 nonsynonymous","S113L T148V",2
"lib2","SARS-CoV-2","GGAGGATTAGTGATTA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","P96Y Y121* T140Y C195S",4
"lib2","SARS-CoV-2","GGAGGATTGCATCTTA",1,52.52,10.45,-0.39,0.04,2.93,1,0,">1 nonsynonymous","E10V G152S",2
"lib2","SARS-CoV-2","GGAGGCACCCAATTAA",10,56.19,6.24,-4.59,0.84,1.5,1.26,0.03,">1 nonsynonymous","C31R A81H T85V",3
"lib2","SARS-CoV-2","GGAGGCACGCATAACT",3,20.53,6,-4.84,2,1.5,1.05,0.03,">1 nonsynonymous","S53E D75A I104G L122S Y165I",5
"lib2","SARS-CoV-2","GGAGGCAGACTGTGGT",3,30.72,NA,NA,NA,NA,NA,NA,"stop","N107* L122S",2
"lib2","SARS-CoV-2","GGAGGCAGGCAAGGAT",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P C158Y R179L",3
"lib2","SARS-CoV-2","GGAGGCCAATCAATCT",18,4.17,NA,NA,NA,NA,NA,NA,"stop","F8* A18S S45C I138S G146T S184F S200Q",7
"lib2","SARS-CoV-2","GGAGGCCCAGATTCAA",2,5.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10S P82M",2
"lib2","SARS-CoV-2","GGAGGCCCCCAAAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R V173F",2
"lib2","SARS-CoV-2","GGAGGCCCGTGATGAT",2,37.44,10.76,-0.07,0.08,2.94,1.07,0,">1 nonsynonymous","S43F D59R T100V",3
"lib2","SARS-CoV-2","GGAGGCCGATGGATTG",1,0.6,NA,NA,NA,NA,NA,NA,"stop","T55* V173P",2
"lib2","SARS-CoV-2","GGAGGCGAGAACACTC",3,0,NA,NA,NA,NA,NA,NA,"stop","L5C R25* C49T S108F T140K R179S",6
"lib2","SARS-CoV-2","GGAGGCGGAAAAACAA",5,55.25,9.65,-1.19,0.11,2.41,1,0.01,">1 nonsynonymous","F8N C61Q",2
"lib2","SARS-CoV-2","GGAGGCGGGGGTTCCA",14,172.43,10.77,-0.06,0.05,2.86,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","GGAGGCTTAATTAGTA",1,19.35,8.25,-2.59,0.37,1.5,1.17,0.03,">1 nonsynonymous","K26Q D90A S108N",3
"lib2","SARS-CoV-2","GGAGGCTTTGAGATAC",8,100.34,8.65,-2.19,0.07,2.38,1.08,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","GGAGGGAAAGAAGATA",5,95.35,10.97,0.14,0.06,2.93,1.07,0,">1 nonsynonymous","F160L N171Y",2
"lib2","SARS-CoV-2","GGAGGGAGTAATTGAA",6,0.62,NA,NA,NA,NA,NA,NA,"stop","E141* T148Q",2
"lib2","SARS-CoV-2","GGAGGGATGCATACAA",1,14.93,8.97,-1.87,0.09,2.86,1.16,0,">1 nonsynonymous","N4M Q168D",2
"lib2","SARS-CoV-2","GGAGGGCATATTACAT",6,85.67,10.84,0,0.03,2.98,1.03,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","GGAGGGCTTTAAGATG",15,3.14,NA,NA,NA,NA,NA,NA,"stop","R27* T148F",2
"lib2","SARS-CoV-2","GGAGGGGAGATTTAAT",8,98.18,10.8,-0.03,0.04,2.89,1.11,0,">1 nonsynonymous","D97M N151K",2
"lib2","SARS-CoV-2","GGAGGGTGAGATAAAG",2,21.28,10.89,0.06,0.08,2.79,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGGTAAACCCTATC",1,57.8,8.3,-2.53,0.11,2.77,1.04,0,"1 nonsynonymous","S113W",1
"lib2","SARS-CoV-2","GGAGGTATTAAGTACC",1,17.68,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F12S Y35T S147T G174F",4
"lib2","SARS-CoV-2","GGAGGTCACAACACAT",5,41.28,10.48,-0.36,0.05,2.97,1.03,0,">1 nonsynonymous","A81S T85S D98N E141T",4
"lib2","SARS-CoV-2","GGAGGTCCAAGGAAGT",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101E N107I A145S",3
"lib2","SARS-CoV-2","GGAGGTCTAAAAGACT",4,0.99,NA,NA,NA,NA,NA,NA,"stop","C6S F70T G83T S147* F167P",5
"lib2","SARS-CoV-2","GGAGGTCTACGTTATA",1,68.99,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K87S C150D N151K",3
"lib2","SARS-CoV-2","GGAGGTGAAGCAAACT",12,1.07,NA,NA,NA,NA,NA,NA,"stop","L5* L57V C150H",3
"lib2","SARS-CoV-2","GGAGGTGCACCGATAA",9,84.55,6,-4.84,2,1.5,1.39,0.04,">1 nonsynonymous","I88M L95W G117A P149Y F160L",5
"lib2","SARS-CoV-2","GGAGGTGCTTTGGTTT",5,58.99,6,-4.84,2,3,1.18,0,">1 nonsynonymous","P82D S113Y",2
"lib2","SARS-CoV-2","GGAGGTTAGCGAACAG",2,24.78,8.61,-2.22,0.17,1.5,1.01,0.03,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","GGAGGTTGAGTCACCT",3,49.56,8.98,-1.86,0.06,3,1.05,0,"1 nonsynonymous","G117W",1
"lib2","SARS-CoV-2","GGAGGTTGTAAATATC",8,43.76,7.85,-2.99,0.28,1.5,1.14,0.03,">1 nonsynonymous","P96L S129M",2
"lib2","SARS-CoV-2","GGAGTAAACGGGTAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","E76C G86R R127* K132L",4
"lib2","SARS-CoV-2","GGAGTAAAGTTCTGAT",13,112.85,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G9K I28V L95S",3
"lib2","SARS-CoV-2","GGAGTAAATAAGCAAG",2,25.06,9.93,-0.91,0.16,1.95,1.18,0.01,">1 nonsynonymous","N4L A81V",2
"lib2","SARS-CoV-2","GGAGTAAATGGATCGT",2,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T L57F N92G V115T E135C V153C P169A",7
"lib2","SARS-CoV-2","GGAGTAACCCGTAATC",4,85.74,10.7,-0.14,0.07,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGTAACGTGACACG",5,96.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16L G83V K94R G116R A145P G146L",6
"lib2","SARS-CoV-2","GGAGTAACTTTCCGGA",4,51.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T63H R124S N130V Q176L",4
"lib2","SARS-CoV-2","GGAGTAAGATGTTACA",3,87.94,10.79,-0.05,0.07,2.83,1.15,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","GGAGTAAGTAAAAAAA",6,77.11,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A14Y L38S G86T",3
"lib2","SARS-CoV-2","GGAGTAAGTATGATGG",5,93.72,10.27,-0.57,0.07,2.66,1.04,0,">1 nonsynonymous","R16M N40Y D97I",3
"lib2","SARS-CoV-2","GGAGTACACCTGCTAT",7,16.58,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86E W106P",2
"lib2","SARS-CoV-2","GGAGTACAGACAAGTT",4,37.41,9.97,-0.86,0.06,2.68,1.06,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GGAGTACTCCGAATTC",2,20.89,10.58,-0.25,0.09,3,1.01,0,">1 nonsynonymous","E141H N151T",2
"lib2","SARS-CoV-2","GGAGTAGAAGTGGCTT",2,8.54,10.33,-0.51,0.09,2.79,1.06,0,">1 nonsynonymous","N4S D34C",2
"lib2","SARS-CoV-2","GGAGTAGACCTACCAA",1,3.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGAGTAGATCACGTAT",2,20.83,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A67C N92C Q168C",3
"lib2","SARS-CoV-2","GGAGTAGCCACTAAGT",1,7.44,10.69,-0.14,0.16,2.76,1.23,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGAGTATAATATTCAA",2,1.41,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","GGAGTATAATTATGTG",10,103.64,9.35,-1.49,0.04,2.92,1.06,0,">1 nonsynonymous","T15N C61E Y119K",3
"lib2","SARS-CoV-2","GGAGTATATCTAGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L95H L131A G146S S184*",4
"lib2","SARS-CoV-2","GGAGTATCTAGGACAA",17,179.33,8.71,-2.13,0.11,1.73,1.13,0,">1 nonsynonymous","A81L G155E",2
"lib2","SARS-CoV-2","GGAGTATGACCTACAG",1,53.54,10.8,-0.03,0.03,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGTATGCGATAGAC",6,94.25,9.96,-0.88,0.07,2.19,1,0,">1 nonsynonymous","W106A S113A",2
"lib2","SARS-CoV-2","GGAGTATGTATCGCAG",8,1.35,NA,NA,NA,NA,NA,NA,"stop","K48Y V77* G86Y N157V L188N G196S",6
"lib2","SARS-CoV-2","GGAGTATTATGAGGTA",4,0.63,NA,NA,NA,NA,NA,NA,"stop","T46S D59G W106* N120I A145T",5
"lib2","SARS-CoV-2","GGAGTCAATGAAAATG",7,128.1,9.88,-0.95,0.09,2.44,1.04,0,">1 nonsynonymous","G9A F47N T140N V173I T201M",5
"lib2","SARS-CoV-2","GGAGTCAATGACCCAC",5,151.41,10.85,0.02,0.04,2.95,1.05,0,"1 nonsynonymous","L131I",1
"lib2","SARS-CoV-2","GGAGTCACAACGAAAT",4,39.45,10.22,-0.62,0.1,2.58,1.03,0,">1 nonsynonymous","I2F E10R P54A D98S N109V",5
"lib2","SARS-CoV-2","GGAGTCACCGATAACA",7,17.01,8.94,-1.9,0.27,1.62,1.2,0.04,">1 nonsynonymous","T3L S41V C49M Q84G",4
"lib2","SARS-CoV-2","GGAGTCCACATGTGCC",2,49.7,10.44,-0.39,0.05,2.89,1.05,0,"1 nonsynonymous","K48Y",1
"lib2","SARS-CoV-2","GGAGTCTAAAAAGCTA",3,42.64,10.9,0.06,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGAGTCTCGAAAGTCT",20,13.93,NA,NA,NA,NA,NA,NA,"stop","Y21I S41* F62I R73L Q84P",5
"lib2","SARS-CoV-2","GGAGTCTGGTTCCAGG",1,7.69,6.45,-4.39,0.56,1.5,1.12,0.02,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","GGAGTCTTTATTGGGT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V G86C G146D",3
"lib2","SARS-CoV-2","GGAGTGACAGACTAGG",4,62.22,9.64,-1.19,0.09,1.92,1.12,0,">1 nonsynonymous","K26A S43P G51M K56S N120E I138V",6
"lib2","SARS-CoV-2","GGAGTGACGTGGGCAA",10,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D C61W V180S",3
"lib2","SARS-CoV-2","GGAGTGACTTCCCTAA",12,2.11,NA,NA,NA,NA,NA,NA,"stop","N30* L122W Y143L Y165W C195S",5
"lib2","SARS-CoV-2","GGAGTGATCATCAAAA",1,15.79,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N58K C150S F167R R179M",4
"lib2","SARS-CoV-2","GGAGTGATTAATTGGC",8,0.4,NA,NA,NA,NA,NA,NA,"stop","P82* W106F L125S P149I",4
"lib2","SARS-CoV-2","GGAGTGATTAGGCGAT",5,76.12,10.54,-0.3,0.05,2.95,1.05,0,">1 nonsynonymous","K26S S184N",2
"lib2","SARS-CoV-2","GGAGTGATTGACAGGC",4,86.51,8.3,-2.54,0.13,1.81,1.11,0.01,">1 nonsynonymous","S43I D90Y N157R S164K S200M",5
"lib2","SARS-CoV-2","GGAGTGCATGACCTAT",2,46.13,10.01,-0.83,0.06,2.55,1.03,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","GGAGTGCGACCCATAA",5,51.17,9.64,-1.19,0.08,2.02,1.04,0,">1 nonsynonymous","Q84F D98F T201E",3
"lib2","SARS-CoV-2","GGAGTGGATTGTCCCG",1,25.27,9.92,-0.91,0.09,2.1,1.05,0,">1 nonsynonymous","T15L S36K D98Y",3
"lib2","SARS-CoV-2","GGAGTGGCATACACCT",8,129.31,10.23,-0.61,0.03,2.94,1.08,0,">1 nonsynonymous","V37I D75R G174S",3
"lib2","SARS-CoV-2","GGAGTGGTTACAGAGA",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T V181P",2
"lib2","SARS-CoV-2","GGAGTGTCCTATAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","N24A D90* I104D V194I",4
"lib2","SARS-CoV-2","GGAGTGTGCAAGTAGT",8,156.1,10.48,-0.35,0.03,2.94,1.04,0,">1 nonsynonymous","F44L Q84A G152T",3
"lib2","SARS-CoV-2","GGAGTGTTAACCGTTG",5,202.32,10.39,-0.44,0.04,2.91,1.08,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","GGAGTTAAAATGACCA",10,120.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36Y V37C N107F Y123V",4
"lib2","SARS-CoV-2","GGAGTTACAAACCAAT",5,30.71,8.66,-2.17,0.09,2.4,1.08,0,">1 nonsynonymous","A18G G146K",2
"lib2","SARS-CoV-2","GGAGTTATAATTATAA",10,147.04,6,-4.84,2,1.95,1.14,0,">1 nonsynonymous","R27P C61T Y119F C158L",4
"lib2","SARS-CoV-2","GGAGTTCAAACACTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64D V77T Y93I F99N N110T T140Y V181S",7
"lib2","SARS-CoV-2","GGAGTTCGACGAGCCG",8,127.75,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I2G R78D K87H P96K C158G Q176M",6
"lib2","SARS-CoV-2","GGAGTTCGGTTATACA",10,56.18,6.34,-4.5,0.54,1.5,1.19,0.03,">1 nonsynonymous","I72N N92S D112K",3
"lib2","SARS-CoV-2","GGAGTTCTAAATACCA",7,26.88,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F17V I72T N107T",3
"lib2","SARS-CoV-2","GGAGTTGCGCGGATAC",2,77.34,8.66,-2.18,0.08,2.95,1.12,0,">1 nonsynonymous","N110L Y175N",2
"lib2","SARS-CoV-2","GGAGTTTATGTAGTTA",7,466.66,10.61,-0.22,0.03,2.51,1.05,0,">1 nonsynonymous","N40T C49L A89T L162N",4
"lib2","SARS-CoV-2","GGAGTTTTCAAATGAT",3,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F D68T G166D",3
"lib2","SARS-CoV-2","GGATAAAAAAATTAGT",1,23.14,10.66,-0.17,0.09,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATAAAAAAGAGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88G D98E N120H P161T",4
"lib2","SARS-CoV-2","GGATAAAAACTTAAAT",3,6.03,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y66Q K114M V181P V182F",4
"lib2","SARS-CoV-2","GGATAAAAATTCGCAA",1,6.95,8.36,-2.47,0.28,1.61,1.2,0.06,">1 nonsynonymous","W106E N151T",2
"lib2","SARS-CoV-2","GGATAAAATCCATGAC",8,35.05,10.89,0.05,0.06,2.96,1.02,0,"1 nonsynonymous","S43F",1
"lib2","SARS-CoV-2","GGATAAAATTGACACA",3,16.56,7.02,-3.81,0.31,2.08,1.02,0.03,">1 nonsynonymous","P54Q C102H Y178T",3
"lib2","SARS-CoV-2","GGATAAACGCAGCGAA",4,41.63,10.27,-0.57,0.09,2.68,1.06,0,"1 nonsynonymous","P133V",1
"lib2","SARS-CoV-2","GGATAAACTCTACCCA",9,78.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W23C N24Y Y50P",3
"lib2","SARS-CoV-2","GGATAAACTTACCATA",8,57.14,8.09,-2.74,0.27,1.5,1.16,0.03,"1 nonsynonymous","F134P",1
"lib2","SARS-CoV-2","GGATAAAGAAATGTAG",5,45.6,9.9,-0.94,0.12,2.28,1.01,0.01,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","GGATAAAGAGAGGCGA",5,71.75,8.01,-2.83,0.13,1.79,1.08,0.01,">1 nonsynonymous","K114T G146L",2
"lib2","SARS-CoV-2","GGATAAAGATACCAGG",8,142.11,9.82,-1.02,0.08,2.41,1.03,0,">1 nonsynonymous","N24S Y91C N120L",3
"lib2","SARS-CoV-2","GGATAAATACAACTAA",14,322.57,10.58,-0.25,0.03,2.95,1.03,0,">1 nonsynonymous","V11I V32E D98A",3
"lib2","SARS-CoV-2","GGATAAATATCTAGCC",1,9.9,10.85,0.01,0.2,2.75,1.28,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGATAAATCATTGTCT",6,19.04,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P82S N130M N171C R179S",4
"lib2","SARS-CoV-2","GGATAAATCCTTGCAA",1,4.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M D112R",2
"lib2","SARS-CoV-2","GGATAAATTTAATTGA",6,33.67,8.36,-2.48,0.14,2.69,1.06,0.01,">1 nonsynonymous","R27S R73E",2
"lib2","SARS-CoV-2","GGATAACAATCTAAGT",3,54.67,10.83,-0.01,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATAACATGAGCAAT",1,35.73,10.16,-0.68,0.1,2.63,1.06,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","GGATAACCAAATAAAC",3,0.31,NA,NA,NA,NA,NA,NA,"stop","C49R E76G K94Q K128*",4
"lib2","SARS-CoV-2","GGATAACCCTTTATAA",6,146.91,10.87,0.03,0.03,2.95,1.06,0,">1 nonsynonymous","V37E D98N",2
"lib2","SARS-CoV-2","GGATAACGAAGTATGG",8,158.34,9.82,-1.01,0.08,2.2,1.05,0,">1 nonsynonymous","Q84Y I138F",2
"lib2","SARS-CoV-2","GGATAACGTAAAACGT",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K T55G L162S",3
"lib2","SARS-CoV-2","GGATAACGTAAGCTCA",14,3.84,NA,NA,NA,NA,NA,NA,"stop","F99I S113K Y123*",3
"lib2","SARS-CoV-2","GGATAACGTTCCGCTT",5,37.31,10.73,-0.1,0.05,2.92,1.08,0,">1 nonsynonymous","I2S D97F",2
"lib2","SARS-CoV-2","GGATAACTATAAGAAC",3,68.17,9.68,-1.16,0.05,2.96,1.08,0,">1 nonsynonymous","R27K G146Q",2
"lib2","SARS-CoV-2","GGATAAGAAAATAACA",3,39,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I28L Y35S R73K E141I Y165S",5
"lib2","SARS-CoV-2","GGATAAGACCCAAACC",4,21.79,10.16,-0.68,0.09,2.46,1.01,0.01,">1 nonsynonymous","D34F N151M P197A",3
"lib2","SARS-CoV-2","GGATAAGAGAATACGA",3,25.19,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F12K C49L L60T E135V Q176T",5
"lib2","SARS-CoV-2","GGATAAGAGATTAGCT",8,35.26,8.1,-2.73,0.38,1.5,1.21,0.06,">1 nonsynonymous","F47N Y121M F185E S200Y",4
"lib2","SARS-CoV-2","GGATAAGAGCAAAGAA",4,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L S29Q D59F S200P",4
"lib2","SARS-CoV-2","GGATAAGATCGATAAA",6,21.92,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y91I N120S G146I Y175V",4
"lib2","SARS-CoV-2","GGATAAGTCGGCAAAC",10,42.23,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T3S Q84S Y93T G117K N151L",5
"lib2","SARS-CoV-2","GGATAAGTGTTATTCT",1,29.71,7.69,-3.15,0.18,1.68,1.11,0.01,">1 nonsynonymous","G51N Q84R N107P D137V P197W",5
"lib2","SARS-CoV-2","GGATAAGTTACGCGCA",2,10.03,10.73,-0.1,0.33,2.53,1,0.04,">1 nonsynonymous","N4L K26W S41R",3
"lib2","SARS-CoV-2","GGATAAGTTCGACTAA",4,32.53,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S41L N92K",2
"lib2","SARS-CoV-2","GGATAATAACAGGCTT",16,130.02,9.17,-1.67,0.04,2.88,1.11,0,">1 nonsynonymous","I2D T46A L60Q V115P L122Q T170L",6
"lib2","SARS-CoV-2","GGATAATACAGGCCAT",3,43.58,10.17,-0.67,0.05,2.83,1.04,0,">1 nonsynonymous","A105G V173N T201K",3
"lib2","SARS-CoV-2","GGATAATATAAGAAGC",4,69.93,10.72,-0.12,0.05,2.86,1.13,0,">1 nonsynonymous","S41N D97N I138G T201S",4
"lib2","SARS-CoV-2","GGATAATATATATGGT",9,114.63,10.49,-0.34,0.05,2.93,1.09,0,">1 nonsynonymous","K87N Q163H",2
"lib2","SARS-CoV-2","GGATAATCACTATGCT",8,314.59,10.7,-0.14,0.03,2.92,1.08,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","GGATAATGAGCAGGGT",2,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103F K114L",2
"lib2","SARS-CoV-2","GGATAATGTTGTTGAG",13,68.2,6,-4.84,1.42,1.5,1.17,0.01,">1 nonsynonymous","T55Y F99N",2
"lib2","SARS-CoV-2","GGATAATTAACTATTG",9,10.52,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T15L L38V V65S G101N",4
"lib2","SARS-CoV-2","GGATAATTCGAATAAG",3,69.06,10.88,0.05,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATACAAAAACCCAC",6,24.51,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T3C G101I N120K L188M",4
"lib2","SARS-CoV-2","GGATACAAAAATTGTG",7,2.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","GGATACAAGTACTCTA",7,70.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S139E C158L",2
"lib2","SARS-CoV-2","GGATACAAGTAGACGG",10,1.4,NA,NA,NA,NA,NA,NA,"stop","A18M I72F K94* T100I",4
"lib2","SARS-CoV-2","GGATACAATAATTACC",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L I80T",2
"lib2","SARS-CoV-2","GGATACACATGCACTG",4,54.03,10.69,-0.14,0.1,2.75,1.12,0.01,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","GGATACACTTTTGACA",12,170.87,7.34,-3.49,0.12,1.82,1.1,0,"1 nonsynonymous","C150T",1
"lib2","SARS-CoV-2","GGATACAGAGTGTGCA",6,22.36,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","L5T C102R C150H",3
"lib2","SARS-CoV-2","GGATACAGTTACAGAG",5,163.15,10.53,-0.31,0.04,2.91,1.07,0,"1 nonsynonymous","R136L",1
"lib2","SARS-CoV-2","GGATACATACGACCCA",7,47.01,6.9,-3.94,0.2,1.5,1.1,0.01,">1 nonsynonymous","C6F F12R T140G F156T",4
"lib2","SARS-CoV-2","GGATACATATCAATTA",4,42.15,10.91,0.07,0.09,2.92,1.04,0,"1 nonsynonymous","V71I",1
"lib2","SARS-CoV-2","GGATACATCTTATTAT",8,0.52,NA,NA,NA,NA,NA,NA,"stop","V11H A22H S45* V103Q N130L",5
"lib2","SARS-CoV-2","GGATACCATCTGCAAA",3,21.06,10.67,-0.17,0.08,2.92,1.07,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GGATACCATCTGCAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","G86* L125C Q168S",3
"lib2","SARS-CoV-2","GGATACCCCAAACAAG",7,73.89,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","K132Q G172C R179V",3
"lib2","SARS-CoV-2","GGATACCCCAGTTCAG",6,0.17,NA,NA,NA,NA,NA,NA,"stop","N4* F12H P54C T85D E141L P161*",6
"lib2","SARS-CoV-2","GGATACCCCATGACTG",3,88.15,9.17,-1.66,0.03,2.98,1.05,0,">1 nonsynonymous","V37A G166L",2
"lib2","SARS-CoV-2","GGATACCCCGTATTAG",1,27.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G74T C158S",2
"lib2","SARS-CoV-2","GGATACCGTGCGACAT",1,23.6,9.02,-1.82,0.08,2.67,1.02,0,">1 nonsynonymous","S129A Q144W F156S",3
"lib2","SARS-CoV-2","GGATACCTACACTAAA",8,108.97,10.22,-0.62,0.05,2.68,1.05,0,"1 nonsynonymous","D34W",1
"lib2","SARS-CoV-2","GGATACGAAGTTCGAT",10,64.39,9.32,-1.51,0.06,2.16,1.05,0,">1 nonsynonymous","N13M V37R I138L P169F",4
"lib2","SARS-CoV-2","GGATACGACATTCCAA",1,5.97,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","Y93S N151L Y159I",3
"lib2","SARS-CoV-2","GGATACGACCAATAGA",2,102.07,10.7,-0.14,0.04,2.94,1.03,0,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","GGATACGAGGTACATG",1,34.24,10.44,-0.39,0.05,2.92,1.07,0,">1 nonsynonymous","Y39K T140F",2
"lib2","SARS-CoV-2","GGATACGATGGTAGTG",1,18.2,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T3I S19P K87G N92Y S113T",5
"lib2","SARS-CoV-2","GGATACGCCCAGCGAG",6,63.61,8.09,-2.74,0.17,1.81,1.04,0.01,">1 nonsynonymous","Y165A T170S",2
"lib2","SARS-CoV-2","GGATACGGAATACACT",1,2.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","GGATACTACGCTCTAG",4,23.78,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","T100L W106C Y119L G155C S184T T201A",6
"lib2","SARS-CoV-2","GGATACTAGACGATTC",8,123.61,10.9,0.07,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATACTAGGGTGAAT",3,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W P82Y I104E",3
"lib2","SARS-CoV-2","GGATACTCGAGGTGTA",7,53.77,6.91,-3.93,0.41,1.5,1.18,0.03,">1 nonsynonymous","N4R W106L Y121I",3
"lib2","SARS-CoV-2","GGATACTCGTTCTCAC",2,10.08,10.86,0.02,0.08,2.99,1.03,0,"1 nonsynonymous","N24G",1
"lib2","SARS-CoV-2","GGATAGAAACATGCCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q144V",1
"lib2","SARS-CoV-2","GGATAGAAACCTTGTG",5,22.67,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","V52S S139P",2
"lib2","SARS-CoV-2","GGATAGAAAGGGATAG",9,141.7,10.84,0,0.04,2.92,1.11,0,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","GGATAGACAACTAGAC",10,9.53,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N1Q S45T A89W",3
"lib2","SARS-CoV-2","GGATAGACCAACACCT",3,36.49,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61P A67L A105S D112R",4
"lib2","SARS-CoV-2","GGATAGACCGCAAAAC",7,55.12,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F44L N64K G83Y C150V R179V",5
"lib2","SARS-CoV-2","GGATAGACGATTTGTT",5,73.81,9.29,-1.54,0.06,2.75,1.09,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","GGATAGAGTACAGCAG",3,140.21,10.75,-0.09,0.04,2.91,1.11,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","GGATAGATAAAACCCC",1,7.2,10.74,-0.1,0.03,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATAGATCACTGCTT",1,19.5,10.16,-0.68,0.1,2.85,1.02,0,">1 nonsynonymous","F44V C61S P149L",3
"lib2","SARS-CoV-2","GGATAGATGGAGTATA",2,47.87,10.18,-0.65,0.08,2.54,1.05,0,">1 nonsynonymous","G9S F99L S164A",3
"lib2","SARS-CoV-2","GGATAGCCAAATACTG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","S53L C61Q A81* D90Y W106Q Y121P",6
"lib2","SARS-CoV-2","GGATAGCCGTCCTTCT",2,30.7,10.81,-0.03,0.05,2.89,1.12,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","GGATAGCTATGGTTTA",2,69.4,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F44A N64D P82S T100S T201A",5
"lib2","SARS-CoV-2","GGATAGGAGGTCATCA",10,103.49,9.31,-1.53,0.06,2.78,1.11,0,">1 nonsynonymous","F62C D98R E141K F156M K198L",5
"lib2","SARS-CoV-2","GGATAGGATATTTTAT",18,324.14,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D137I Q176V",2
"lib2","SARS-CoV-2","GGATAGGGAGCATTAT",17,100.06,7.09,-3.75,0.19,1.5,1.15,0.01,">1 nonsynonymous","G86R E141L",2
"lib2","SARS-CoV-2","GGATAGGGGACCCAAT",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S R127L",2
"lib2","SARS-CoV-2","GGATAGGGTATTAGTA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V R73G G83Q",3
"lib2","SARS-CoV-2","GGATAGGTTTTTTCGG",2,21.92,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","Y35L G101P G117L",3
"lib2","SARS-CoV-2","GGATAGTATCGCTCAT",3,25.9,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T55D A81C F134M N157A V182F T201R",6
"lib2","SARS-CoV-2","GGATAGTTATTGACCT",3,78.63,10.86,0.02,0.05,2.9,1.12,0,">1 nonsynonymous","Y35L T55E",2
"lib2","SARS-CoV-2","GGATATAAAACGGATT",2,1.43,NA,NA,NA,NA,NA,NA,"stop","T15N D34I Y91W F185*",4
"lib2","SARS-CoV-2","GGATATAAAATCGAAA",2,42.17,10.63,-0.21,0.03,2.92,1.08,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","GGATATAACTTATAAT",3,60.91,9.8,-1.03,0.11,2.3,1.13,0.01,">1 nonsynonymous","P7F A33R L60M",3
"lib2","SARS-CoV-2","GGATATAAGGTGAACA",10,2.02,NA,NA,NA,NA,NA,NA,"stop","C61* Y93L",2
"lib2","SARS-CoV-2","GGATATACTAATGAAG",2,16.36,8.34,-2.49,0.18,2.06,1.08,0.01,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","GGATATAGATACCGTT",1,11.54,8.31,-2.53,0.13,2.57,1.08,0.01,">1 nonsynonymous","T140R A145N",2
"lib2","SARS-CoV-2","GGATATAGATTAATCA",11,106.01,6,-4.84,2,1.68,1.12,0,">1 nonsynonymous","S29R S36F T55I P82M I142S",5
"lib2","SARS-CoV-2","GGATATAGTAGATACG",3,36.41,10.68,-0.16,0.07,3,1.01,0,"1 nonsynonymous","S36W",1
"lib2","SARS-CoV-2","GGATATAGTTCCGTAC",5,26.97,10.06,-0.77,0.11,2.73,1.03,0.01,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","GGATATATAGCATAAG",12,106.91,10.77,-0.07,0.06,2.87,1.14,0,">1 nonsynonymous","R16D T148E",2
"lib2","SARS-CoV-2","GGATATATATCATCTC",12,107.11,6,-4.84,2,1.5,1.27,0.04,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","GGATATATATTTTTTT",7,101.48,10.8,-0.03,0.03,3,1,0,">1 nonsynonymous","E141L Q168F",2
"lib2","SARS-CoV-2","GGATATATGCATAACC",2,48.11,7.63,-3.2,0.19,1.78,1.05,0.01,">1 nonsynonymous","A18M V71L E135L",3
"lib2","SARS-CoV-2","GGATATATGCATTCAT",8,202.78,10.73,-0.1,0.04,2.97,1.06,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","GGATATCAAGTACCTA",6,0.93,NA,NA,NA,NA,NA,NA,"stop","V77* I138L",2
"lib2","SARS-CoV-2","GGATATCACTACAGTT",3,58.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7D A18S N30P R124W S200K",5
"lib2","SARS-CoV-2","GGATATCCAAGGAAGG",2,20.06,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","K56V F126E D137P",3
"lib2","SARS-CoV-2","GGATATCCGACTCAAA",3,72.01,8.07,-2.77,0.18,1.82,1.11,0.01,">1 nonsynonymous","K26Q S113V Y123S",3
"lib2","SARS-CoV-2","GGATATCGGATCACCC",12,215.7,10.62,-0.21,0.02,2.95,1.05,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","GGATATCTCAGATGAG",9,201.98,10.11,-0.73,0.06,2.42,1.03,0,">1 nonsynonymous","N1T F134I",2
"lib2","SARS-CoV-2","GGATATCTTAAAAGGG",2,22.01,10.68,-0.16,0.13,2.81,1.22,0.01,">1 nonsynonymous","G152R P197L",2
"lib2","SARS-CoV-2","GGATATGAAACTTTCG",8,206.38,8.34,-2.5,0.1,1.97,1.07,0,">1 nonsynonymous","G116D I138G Q176M",3
"lib2","SARS-CoV-2","GGATATGCACGGCAGG",22,188.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S K56S G86S",3
"lib2","SARS-CoV-2","GGATATGCAGACCATT",2,23.68,9.4,-1.43,0.07,2.53,1.08,0,">1 nonsynonymous","G9S Y35R Q168N",3
"lib2","SARS-CoV-2","GGATATGCCGGGTTAA",1,60.93,6.24,-4.6,0.75,1.5,1.22,0.02,">1 nonsynonymous","L38Y Y165S",2
"lib2","SARS-CoV-2","GGATATGGAGTCTCGA",12,136.63,10.59,-0.24,0.05,2.91,1.05,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","GGATATGTAACGTGAA",24,200.23,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","V11D Y66D P149H",3
"lib2","SARS-CoV-2","GGATATTAAGATTTTA",4,20.02,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14R F47T C102D P149C",4
"lib2","SARS-CoV-2","GGATATTAATAATAAG",13,100.47,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T3M L162R Y178D",3
"lib2","SARS-CoV-2","GGATATTACAAAGTAC",13,55.77,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","N1V S45V I80P",3
"lib2","SARS-CoV-2","GGATATTACATTAAAG",5,98.89,9.42,-1.41,0.08,2.26,1.04,0,">1 nonsynonymous","D34K A42E N107P",3
"lib2","SARS-CoV-2","GGATATTATAGATCCG",6,0.61,NA,NA,NA,NA,NA,NA,"stop","C6E D137* Q168F T201D",4
"lib2","SARS-CoV-2","GGATATTCAATAGCAC",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121E R127L",2
"lib2","SARS-CoV-2","GGATATTCAGTGAGAC",22,262.11,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","S36W S41Q C61G I88Y P96S N107H",6
"lib2","SARS-CoV-2","GGATATTCATGGTATC",12,33.38,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","T3P G51V A89K A105S L125H",5
"lib2","SARS-CoV-2","GGATATTCCCCGCTAG",4,16.52,6.12,-4.72,0.87,3,1.17,0.02,">1 nonsynonymous","R27W F47S K94W N120W",4
"lib2","SARS-CoV-2","GGATATTGCATACATA",7,70.98,10.2,-0.64,0.05,2.78,1.05,0,">1 nonsynonymous","N13S D98S",2
"lib2","SARS-CoV-2","GGATATTGGATCGTGG",6,41.94,7.98,-2.85,0.4,1.5,1.25,0.03,">1 nonsynonymous","F47G T55H N64T Y119R",4
"lib2","SARS-CoV-2","GGATCAAACACCACAC",7,207.62,10.69,-0.14,0.02,2.99,1.02,0,"1 nonsynonymous","T148F",1
"lib2","SARS-CoV-2","GGATCAAATGACATTC",3,46.14,6,-4.84,2,1.5,1.42,0.07,">1 nonsynonymous","N64A G86L T100A L122A R179Q",5
"lib2","SARS-CoV-2","GGATCAACAGACATAC",6,46.34,9.38,-1.45,0.03,3,1.01,0,">1 nonsynonymous","E141V N157D",2
"lib2","SARS-CoV-2","GGATCAACTCTGCTAG",1,19.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D75L F99S",2
"lib2","SARS-CoV-2","GGATCAAGAACCAGGG",1,56.25,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V37W S45L C61S I88K I104L N107I Y165L",7
"lib2","SARS-CoV-2","GGATCAAGTGGCGAAG",3,45.71,9.57,-1.27,0.18,1.74,1.27,0.01,">1 nonsynonymous","P96E N151L",2
"lib2","SARS-CoV-2","GGATCAATCACAATAA",1,29.51,8.92,-1.92,0.33,1.5,1.23,0.02,">1 nonsynonymous","F12L D137S",2
"lib2","SARS-CoV-2","GGATCAATTAACTTGT",1,25.7,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N40L D90G N107L",3
"lib2","SARS-CoV-2","GGATCACAAAATATAG",1,7.26,8.7,-2.13,0.23,1.78,1.04,0.01,">1 nonsynonymous","L5H Y50S L122F P191S",4
"lib2","SARS-CoV-2","GGATCACCATACAAAA",2,50.48,10.64,-0.2,0.03,2.96,1.04,0,"1 nonsynonymous","L60W",1
"lib2","SARS-CoV-2","GGATCACTAGTTAAGA",12,43.08,6.16,-4.68,0.69,1.5,1.26,0.02,">1 nonsynonymous","L60R G101H E141G K199T",4
"lib2","SARS-CoV-2","GGATCACTGCGCATCT",9,2.74,NA,NA,NA,NA,NA,NA,"stop","V37G F70* N157V Q163L",4
"lib2","SARS-CoV-2","GGATCAGACTTCCGAG",2,71.52,9.96,-0.87,0.05,2.26,1.1,0,">1 nonsynonymous","N40Y D98I L122K S164L",4
"lib2","SARS-CoV-2","GGATCAGCTGCTATTC",2,17.08,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L95S Y123I K132G",3
"lib2","SARS-CoV-2","GGATCAGGAAAACTTG",5,30.49,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","L57D D98F N157H",3
"lib2","SARS-CoV-2","GGATCAGGCATAACCT",4,31.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18W V103L N118S",3
"lib2","SARS-CoV-2","GGATCAGTTAATATCC",20,186.07,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9K Y91N N107W D112K E141L",5
"lib2","SARS-CoV-2","GGATCATAATTACGAC",4,15.37,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","N40S T55Y S129L R179L",4
"lib2","SARS-CoV-2","GGATCATACTGAACAC",4,109.97,10.88,0.05,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATCATCAAATTAGA",3,1.34,NA,NA,NA,NA,NA,NA,"stop","A42* G166P",2
"lib2","SARS-CoV-2","GGATCATTATATCCTT",3,40.99,10.79,-0.05,0.05,2.92,1.08,0,"1 nonsynonymous","L60C",1
"lib2","SARS-CoV-2","GGATCCAATGTATCTC",8,6.15,NA,NA,NA,NA,NA,NA,"stop","K56C A81Y Y93*",3
"lib2","SARS-CoV-2","GGATCCACGCACAAGC",2,52.47,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T85R Y91C Q168P Y178V",4
"lib2","SARS-CoV-2","GGATCCCACCATTACA",5,112.2,9.73,-1.11,0.06,1.98,1.04,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","GGATCCCACTATTGAG",2,20.12,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","N92R R136L",2
"lib2","SARS-CoV-2","GGATCCCGCAAAATCC",10,71.02,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V65L F99T S129N I142S",4
"lib2","SARS-CoV-2","GGATCCGAATTATAAG",9,6.24,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D34K S129G T140P C158M G166E S184F",6
"lib2","SARS-CoV-2","GGATCCGTATTCTGGA",1,14.63,10.68,-0.16,0.1,2.92,1.08,0.01,">1 nonsynonymous","Y66N N171I",2
"lib2","SARS-CoV-2","GGATCCGTGTAAGGTC",7,5.03,NA,NA,NA,NA,NA,NA,"stop","Y35* F62D A105S P133Q T170A",5
"lib2","SARS-CoV-2","GGATCCTAAAGCAAAA",10,101.47,8.17,-2.67,0.11,2.08,1.05,0,">1 nonsynonymous","G117A G155V",2
"lib2","SARS-CoV-2","GGATCCTAGTCAGAGA",5,88.03,11.18,0.34,0.17,2.8,1.15,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGATCCTTAACAGAGG",2,10.39,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15F F44L V77M G83D C150W",5
"lib2","SARS-CoV-2","GGATCGAAATTTATAA",2,27.22,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y50H L60T F99V T140P C195G",5
"lib2","SARS-CoV-2","GGATCGAATACTAATT",3,19.65,10.58,-0.25,0.06,2.87,1.11,0,"1 nonsynonymous","N24M",1
"lib2","SARS-CoV-2","GGATCGACGTTAGCAG",22,107.07,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V52F N58K D90R P133N C158E",5
"lib2","SARS-CoV-2","GGATCGAGAAGCTGTG",24,369.64,10.69,-0.15,0.03,2.89,1.09,0,"1 nonsynonymous","N151V",1
"lib2","SARS-CoV-2","GGATCGAGCCCAACTA",5,64.12,10.68,-0.15,0.04,2.99,1.03,0,">1 nonsynonymous","V37T K48I V153S",3
"lib2","SARS-CoV-2","GGATCGAGTCCAATGT",2,32.43,8.46,-2.38,0.08,2.19,1.01,0,">1 nonsynonymous","T46K G117R",2
"lib2","SARS-CoV-2","GGATCGATTAATACCC",6,18.77,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","A14L G83V G101T W106R K114L K128G F160S T201P",8
"lib2","SARS-CoV-2","GGATCGCAACTAAAAA",10,97.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68K S113R",2
"lib2","SARS-CoV-2","GGATCGCCAACACTCT",2,21.9,8.41,-2.42,0.12,1.65,1.02,0.01,">1 nonsynonymous","Y35P Q84Y N118A",3
"lib2","SARS-CoV-2","GGATCGCCAATAGGCA",7,108.16,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","A105S S129H Y159K V173P",4
"lib2","SARS-CoV-2","GGATCGGTCTTCCCAC",21,465.05,10.3,-0.53,0.03,2.87,1.06,0,"1 nonsynonymous","C102I",1
"lib2","SARS-CoV-2","GGATCGTTTCAAAACC",6,55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112C F167A",2
"lib2","SARS-CoV-2","GGATCTAAAAGTATTA",7,106.09,10.31,-0.53,0.03,2.99,1.02,0,">1 nonsynonymous","Y35Q K87Y",2
"lib2","SARS-CoV-2","GGATCTAAACCATGAT",2,22.57,7.08,-3.76,0.55,1.5,1.14,0.06,">1 nonsynonymous","N4M N92Y",2
"lib2","SARS-CoV-2","GGATCTAAGCCCCCAG",2,76.08,10.03,-0.81,0.07,2.8,1.06,0,">1 nonsynonymous","T55Y Y121K",2
"lib2","SARS-CoV-2","GGATCTAATATGGCCA",2,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F F62K P82W A89F S113F E141T",6
"lib2","SARS-CoV-2","GGATCTAATCCCACTG",2,0,NA,NA,NA,NA,NA,NA,"stop","C31* K56* G83L",3
"lib2","SARS-CoV-2","GGATCTATAATCGGCT",13,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N S113Q",2
"lib2","SARS-CoV-2","GGATCTCACGCGGTCC",5,49.91,10.1,-0.73,0.09,2.59,1.02,0,">1 nonsynonymous","E10D T15Q S53W",3
"lib2","SARS-CoV-2","GGATCTCATCTAAGCG",2,5.82,10.34,-0.5,0.11,3,1.01,0,">1 nonsynonymous","S43N N130G",2
"lib2","SARS-CoV-2","GGATCTCGAGAACATG",1,29.75,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10P C49F L131G",3
"lib2","SARS-CoV-2","GGATCTCGTAGACAAT",2,8.37,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","S69F I104S N118Q",3
"lib2","SARS-CoV-2","GGATCTGATTTATACT",7,55.63,10.85,0.01,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GGATCTGGACAACATA",5,36.6,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","E10A V77S Y121T Q144I G152T",5
"lib2","SARS-CoV-2","GGATCTGTGACGATAA",9,152.41,10.85,0.02,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATCTTCCAGTCTAG",1,61.35,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86W L131V Y143L Y159L",4
"lib2","SARS-CoV-2","GGATCTTTACAGCTGC",5,5.64,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P54I I104D",2
"lib2","SARS-CoV-2","GGATCTTTATCTGCTG",17,253.78,6,-4.84,1.08,1.5,1.14,0,">1 nonsynonymous","C158P G174K",2
"lib2","SARS-CoV-2","GGATGAACATGACAAG",4,39.26,10.1,-0.74,0.08,2.46,1.05,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","GGATGAACGTATAATC",3,2.13,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","GGATGAACTCATGCGC",4,25.22,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82M I142K",2
"lib2","SARS-CoV-2","GGATGAACTCGACGTA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108V I138F",2
"lib2","SARS-CoV-2","GGATGAAGAAGAGTAA",11,139.76,10.88,0.04,0.04,2.93,1.06,0,"1 nonsynonymous","K198Q",1
"lib2","SARS-CoV-2","GGATGAAGCTTAAAGC",3,36.56,7.74,-3.1,0.28,1.5,1.05,0.02,">1 nonsynonymous","S41G V71L F167L",3
"lib2","SARS-CoV-2","GGATGAATCCCCTTAA",6,11.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L F17E N107L",3
"lib2","SARS-CoV-2","GGATGAATGATTCAGT",8,140.7,10.82,-0.01,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATGACAAGAACTCG",15,142.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N118S F156M Y165S K198L",4
"lib2","SARS-CoV-2","GGATGACGAATTAATT",2,4.73,NA,NA,NA,NA,NA,NA,"stop","G101A Q168*",2
"lib2","SARS-CoV-2","GGATGACTGAAAATGG",13,202.06,9.17,-1.66,0.03,2.93,1.09,0,">1 nonsynonymous","N110V Y119P",2
"lib2","SARS-CoV-2","GGATGACTTCTTTAAC",4,52.6,8.05,-2.78,0.33,1.5,1.11,0.04,">1 nonsynonymous","F44L C61M S69E A105S F160N",5
"lib2","SARS-CoV-2","GGATGAGCAAAACGAT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","A18S N118S P149F N157I T201*",5
"lib2","SARS-CoV-2","GGATGAGCAATGAGGG",5,8.13,6,-4.84,2,1.5,1.37,0.04,">1 nonsynonymous","D98V V103D",2
"lib2","SARS-CoV-2","GGATGAGTTGACAGGT",5,74.41,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P7D A18E R25A S69K Y91R V115G E141Y A145T",8
"lib2","SARS-CoV-2","GGATGATAAGCCAAAC",2,17.42,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99K E141V G174L",3
"lib2","SARS-CoV-2","GGATGATATGTCCAAT",9,97.1,6.3,-4.53,0.36,1.5,1.17,0.01,">1 nonsynonymous","F17E A33S N107A",3
"lib2","SARS-CoV-2","GGATGATCTACAAATA",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93N G155A",2
"lib2","SARS-CoV-2","GGATGATCTATGTTCC",1,1.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N118F",1
"lib2","SARS-CoV-2","GGATGATGCTTGAGTA",1,31.39,8.69,-2.15,0.07,2.95,1,0,">1 nonsynonymous","D90Q G146K",2
"lib2","SARS-CoV-2","GGATGATTGGGTAAAT",3,23.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62D L95C",2
"lib2","SARS-CoV-2","GGATGATTTAACGCTA",7,74.1,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","N151I V180E T201R",3
"lib2","SARS-CoV-2","GGATGCAACAACCAGA",3,68.91,10.91,0.08,0.06,2.88,1.13,0,"1 nonsynonymous","S43M",1
"lib2","SARS-CoV-2","GGATGCAATAGAGAAT",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Y A22V S43I F99T",4
"lib2","SARS-CoV-2","GGATGCATTATTTCCG",5,58.13,10.19,-0.65,0.05,2.73,1.01,0,">1 nonsynonymous","S41G A89C",2
"lib2","SARS-CoV-2","GGATGCCAAAGCCAAA",1,48.1,9.89,-0.94,0.09,2.22,1.03,0,">1 nonsynonymous","N30V T63V",2
"lib2","SARS-CoV-2","GGATGCCACTCTTCAG",1,0.61,NA,NA,NA,NA,NA,NA,"stop","V37T S69* Y91G Y123T",4
"lib2","SARS-CoV-2","GGATGCCGGGACTGTG",12,137.59,8.25,-2.59,0.14,2.23,1.05,0.01,">1 nonsynonymous","R27M R73E K128R",3
"lib2","SARS-CoV-2","GGATGCCTTACCTGCA",3,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S C49R S139W G172W",4
"lib2","SARS-CoV-2","GGATGCGCATCGGGTG",9,20.38,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62K A89E V173S S184P",4
"lib2","SARS-CoV-2","GGATGCTGGAGAAAAT",10,872.59,9.81,-1.03,0.31,1.5,1,0.04,">1 nonsynonymous","D98I R124S E135S Q163C",4
"lib2","SARS-CoV-2","GGATGCTGGGTGACCA",6,17.26,9.3,-1.54,0.22,1.79,1.13,0.03,">1 nonsynonymous","R127M S147A S200R",3
"lib2","SARS-CoV-2","GGATGCTGTCGACACA",8,7.2,NA,NA,NA,NA,NA,NA,"stop","T55S N109* T140R",3
"lib2","SARS-CoV-2","GGATGGAACATCAAGA",16,172.19,9.72,-1.12,0.04,1.93,1.06,0,">1 nonsynonymous","D90I T100Y E141G",3
"lib2","SARS-CoV-2","GGATGGACACGTTAGG",4,40.03,10.94,0.11,0.06,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATGGACCTTGTCCT",5,82.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V71Y Q163T",2
"lib2","SARS-CoV-2","GGATGGACTACGAATA",2,32.32,9.41,-1.43,0.1,2.32,1,0.01,">1 nonsynonymous","T55F Y121R",2
"lib2","SARS-CoV-2","GGATGGAGCGTAATCA",5,77.02,6,-4.84,0.55,1.5,1.11,0,">1 nonsynonymous","G86Q N110F V115Y L122K K132L Y165S P177I",7
"lib2","SARS-CoV-2","GGATGGAGTTCCATAG",6,43.39,10.89,0.05,0.03,2.91,1.07,0,">1 nonsynonymous","F62S T85K Y123F",3
"lib2","SARS-CoV-2","GGATGGATAGCCGGGT",14,223.16,10.22,-0.62,0.02,2.93,1.06,0,">1 nonsynonymous","G9D L60N K87G",3
"lib2","SARS-CoV-2","GGATGGCAGACGAGAA",4,11.58,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","G83M D112W N118T R124K Y143F Y165C",6
"lib2","SARS-CoV-2","GGATGGGACAGCCTAC",1,68.67,8.29,-2.55,0.19,2.24,1.03,0.01,"1 nonsynonymous","Q176I",1
"lib2","SARS-CoV-2","GGATGGGCAAGTGGGG",4,26.91,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T55K G74P G116A G166A V173N",5
"lib2","SARS-CoV-2","GGATGGGTATGCACAC",3,41.23,9.63,-1.2,0.35,1.7,1.07,0.04,">1 nonsynonymous","N4R A22D Y91S S129Y",4
"lib2","SARS-CoV-2","GGATGGTCTTACTAAT",8,55.34,10.75,-0.08,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATGGTGCCCACTAG",7,118.99,10.55,-0.28,0.04,2.97,1.04,0,">1 nonsynonymous","G155T T201E",2
"lib2","SARS-CoV-2","GGATGTAAACCCTGGT",5,101.72,10.85,0.01,0.06,2.97,1.05,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","GGATGTAATACCCCAA",27,100,6.08,-4.76,1.68,1.5,1.4,0.05,">1 nonsynonymous","N1R P96F G155S",3
"lib2","SARS-CoV-2","GGATGTACCACCTAAT",6,69.72,10.78,-0.06,0.07,2.79,1.1,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","GGATGTACCTTAGTCA",5,36.35,10.32,-0.51,0.09,2.8,1.13,0.01,">1 nonsynonymous","N58K Y66R L122H",3
"lib2","SARS-CoV-2","GGATGTAGTAAAGAAC",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M P82L G86S",3
"lib2","SARS-CoV-2","GGATGTAGTGAGATCA",2,21.22,10.72,-0.11,0.06,3,1,0,">1 nonsynonymous","I2S T46A",2
"lib2","SARS-CoV-2","GGATGTCAATGATATG",3,105.64,10.84,0,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATGTCACTCGCGGC",5,41.28,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T3S T63K N92R",3
"lib2","SARS-CoV-2","GGATGTCATAATAGCC",2,50.7,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N64I D98H G117V T170L",4
"lib2","SARS-CoV-2","GGATGTGGCGCACAGT",4,76.23,9.83,-1.01,0.08,2.11,1.02,0,">1 nonsynonymous","Y66T I88M",2
"lib2","SARS-CoV-2","GGATGTTAAGGATCTC",1,29.96,10.9,0.06,0.08,3,1.05,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","GGATGTTACTTATGAC",1,57.96,9.06,-1.78,0.16,1.93,1.12,0.01,">1 nonsynonymous","K56L R127H T170S",3
"lib2","SARS-CoV-2","GGATGTTTGGGACGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R W106* N151Y Y175E",4
"lib2","SARS-CoV-2","GGATTAAAATTCCTCA",3,65.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S45P N64L F134P",3
"lib2","SARS-CoV-2","GGATTAAACAACAAAA",4,45.81,10.37,-0.46,0.06,2.88,1.09,0,"1 nonsynonymous","G174K",1
"lib2","SARS-CoV-2","GGATTAAATGGTAAAA",2,67.75,10.84,0,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATTAACAATTAACT",8,99.95,6,-4.84,1.71,1.5,1.18,0.01,">1 nonsynonymous","V11A S43Y T85N N157A",4
"lib2","SARS-CoV-2","GGATTAACATATCAAT",1,18.8,10.5,-0.34,0.1,2.91,1.12,0,">1 nonsynonymous","L5P D90H K114T V173I",4
"lib2","SARS-CoV-2","GGATTAACATCTATCG",4,3.95,NA,NA,NA,NA,NA,NA,"stop","S29P S41Y G166*",3
"lib2","SARS-CoV-2","GGATTAACCTATTCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y Y119I G196V",3
"lib2","SARS-CoV-2","GGATTAACGTATATGA",7,100.89,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68G C158M",2
"lib2","SARS-CoV-2","GGATTAAGCCCATTGT",16,299.87,10.85,0.02,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGATTAATAGCTAACG",1,18.51,6,-4.84,2,2.52,1.09,0,">1 nonsynonymous","N4T D98V S129H Q176V",4
"lib2","SARS-CoV-2","GGATTAATTAGTGACA",6,10.25,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22I S41D L60Y P96Q N107K E154G",6
"lib2","SARS-CoV-2","GGATTACATTATAACT",4,0.29,NA,NA,NA,NA,NA,NA,"stop","L5S K26R L125*",3
"lib2","SARS-CoV-2","GGATTACCTATGACAT",1,51.04,10.03,-0.8,0.08,2.76,1,0,">1 nonsynonymous","D59L G116V",2
"lib2","SARS-CoV-2","GGATTAGCAACCAGTA",9,117.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19L L60P F167T",3
"lib2","SARS-CoV-2","GGATTAGTACAATTGT",1,26.38,10.76,-0.08,0.07,2.83,1.13,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","GGATTAGTTTTGACCC",4,39.81,10.51,-0.32,0.07,2.96,1,0,">1 nonsynonymous","V37G T63C K132S",3
"lib2","SARS-CoV-2","GGATTATAATATTGCC",9,7.72,NA,NA,NA,NA,NA,NA,"stop","T85H V153* Y175V",3
"lib2","SARS-CoV-2","GGATTATATTACCAAT",4,86.42,10.79,-0.05,0.02,2.9,1.1,0,">1 nonsynonymous","L5A V173N K198S",3
"lib2","SARS-CoV-2","GGATTATCATCATTTT",4,0,NA,NA,NA,NA,NA,NA,"stop","V32K A42* A105V R136F Y178G",5
"lib2","SARS-CoV-2","GGATTATCGAAACAAC",3,54.94,10.73,-0.1,0.08,2.94,1.04,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","GGATTATGACCCTACA",15,119.11,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G83A F167T",2
"lib2","SARS-CoV-2","GGATTATGAGGAAGCT",9,9.73,NA,NA,NA,NA,NA,NA,"stop","N4L K114D P133H V180*",4
"lib2","SARS-CoV-2","GGATTATGATATCTCT",8,56.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L95Q C158K Q168I H189T",4
"lib2","SARS-CoV-2","GGATTATTGCGAATAT",8,41.21,10.17,-0.66,0.08,2.82,1.15,0,"1 nonsynonymous","G152I",1
"lib2","SARS-CoV-2","GGATTCAAAATTAATA",3,12.17,9.77,-1.06,0.35,1.78,1.07,0.02,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","GGATTCATAGCGCTCC",6,113.48,10.69,-0.14,0.04,2.93,1.05,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","GGATTCATTAGATGGC",8,108.92,10.35,-0.48,0.04,2.95,1.03,0,"1 nonsynonymous","T170Q",1
"lib2","SARS-CoV-2","GGATTCCAAGGGCCCT",2,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L G9M S41K K56S C61L Y93P T100S",7
"lib2","SARS-CoV-2","GGATTCCCACGCTGGA",1,5.26,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12S S129M F167S",3
"lib2","SARS-CoV-2","GGATTCCGCAATTGCG",16,3.97,NA,NA,NA,NA,NA,NA,"stop","N24* F99R S147T K198L",4
"lib2","SARS-CoV-2","GGATTCGGGGATACTG",3,57.66,10.2,-0.63,0.08,2.81,1.05,0,">1 nonsynonymous","A33K S53L",2
"lib2","SARS-CoV-2","GGATTCTATAACACGT",3,14.61,9.92,-0.91,0.14,2.77,1,0.01,">1 nonsynonymous","I2W S45Y F156V",3
"lib2","SARS-CoV-2","GGATTCTATATACATG",2,21.38,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V20N F167I",2
"lib2","SARS-CoV-2","GGATTCTTAGTAGTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39H S53E N64A A89I Q176*",5
"lib2","SARS-CoV-2","GGATTCTTTTGAACTG",7,111.64,10.78,-0.06,0.05,2.82,1.1,0,">1 nonsynonymous","T15K T55H",2
"lib2","SARS-CoV-2","GGATTGAAAATGGAGA",4,74.7,10.62,-0.22,0.05,2.93,1.09,0,">1 nonsynonymous","R16M S41A",2
"lib2","SARS-CoV-2","GGATTGAAACAACGCG",7,17.78,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","GGATTGAATCAACTTG",5,174.38,9.63,-1.21,0.06,2.73,1.04,0,">1 nonsynonymous","K48Y G155D",2
"lib2","SARS-CoV-2","GGATTGACGGCACCGC",1,18.95,6.21,-4.62,0.8,1.59,1.11,0.01,">1 nonsynonymous","I28T V52D F134D",3
"lib2","SARS-CoV-2","GGATTGACTAAACTTT",6,79.35,9.8,-1.04,0.08,2.3,1.1,0,">1 nonsynonymous","Q84W N120G V153S",3
"lib2","SARS-CoV-2","GGATTGACTAGATTTG",6,1.4,NA,NA,NA,NA,NA,NA,"stop","T3L T15* P149Q",3
"lib2","SARS-CoV-2","GGATTGCACCACATTG",1,18.55,7.95,-2.89,0.34,1.5,1,0.07,">1 nonsynonymous","L38G A105I",2
"lib2","SARS-CoV-2","GGATTGCCCGATACTT",13,119.5,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V71Y N171L K199T",3
"lib2","SARS-CoV-2","GGATTGGGTCTAGTCA",14,4.22,NA,NA,NA,NA,NA,NA,"stop","V37L A89*",2
"lib2","SARS-CoV-2","GGATTGGTGTTAGGCT",2,6.9,9.38,-1.45,0.07,2.88,1.05,0,">1 nonsynonymous","D59E G117V",2
"lib2","SARS-CoV-2","GGATTGTAAGGCACAC",13,116.43,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14C D68C G83A",3
"lib2","SARS-CoV-2","GGATTGTATAATTATA",3,32.97,10.79,-0.05,0.06,2.95,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GGATTGTCATATATGC",3,2.62,NA,NA,NA,NA,NA,NA,"stop","C6M I72* P82L I88N L95F",5
"lib2","SARS-CoV-2","GGATTGTCCTTTTGAT",4,40.35,10.63,-0.2,0.05,2.87,1,0,">1 nonsynonymous","T55F I104M P149S",3
"lib2","SARS-CoV-2","GGATTGTGAACCAAGG",4,72.16,10.74,-0.09,0.05,2.96,1.07,0,"1 nonsynonymous","G83N",1
"lib2","SARS-CoV-2","GGATTTAACGAAACTT",2,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122N I142S",2
"lib2","SARS-CoV-2","GGATTTACACTTATAC",5,9.45,6.29,-4.55,1.38,1.5,1.16,0.06,">1 nonsynonymous","V20T V65S L95W S139M S164D",5
"lib2","SARS-CoV-2","GGATTTATACTAGATT",1,10.68,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","G9V Y35A V180E",3
"lib2","SARS-CoV-2","GGATTTCCTATAATTA",2,51.62,10.21,-0.62,0.05,2.74,1,0,">1 nonsynonymous","Y39I K48Y K132S",3
"lib2","SARS-CoV-2","GGATTTCTATCACGAA",5,49.82,6.16,-4.68,0.49,1.5,1.12,0.01,">1 nonsynonymous","V37E I80K",2
"lib2","SARS-CoV-2","GGATTTGAAAAAGAAC",2,16.34,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","K56S G74Q D112M",3
"lib2","SARS-CoV-2","GGATTTGAAGCCACGT",3,37.24,10.71,-0.13,0.08,2.83,1.15,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","GGATTTGCCAGCCTTT",1,13.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85W Y91F R179L",3
"lib2","SARS-CoV-2","GGATTTGGTGTTGTGT",6,88.23,10.8,-0.03,0.06,2.86,1.15,0,">1 nonsynonymous","T55S K199M",2
"lib2","SARS-CoV-2","GGATTTGTTTCAACCG",2,29.07,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","R27Y E141Y L162D",3
"lib2","SARS-CoV-2","GGATTTTATATAGCAT",6,139.06,10.87,0.03,0.05,2.89,1.11,0,"1 nonsynonymous","N4G",1
"lib2","SARS-CoV-2","GGATTTTGATTGGCCA",10,207.62,10.09,-0.75,0.06,2.54,1.04,0,"1 nonsynonymous","C102M",1
"lib2","SARS-CoV-2","GGCAAAAAACTACGCA",6,37.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E D97L N120P R136D",4
"lib2","SARS-CoV-2","GGCAAAAAAGTTTACA",5,43.7,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A14S C49L L122T N171R T201S",5
"lib2","SARS-CoV-2","GGCAAAAACCGCGTGC",7,50.95,6.14,-4.7,0.7,1.5,1.16,0.02,">1 nonsynonymous","G9R R27D Y91G F160C",4
"lib2","SARS-CoV-2","GGCAAAAATAGCACCT",3,33.85,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N24T Q84K D90W V103I Q144F A192V",6
"lib2","SARS-CoV-2","GGCAAAAATCCATTCT",1,32.35,10.17,-0.67,0.12,2.55,1.06,0.01,">1 nonsynonymous","I138E Y178L",2
"lib2","SARS-CoV-2","GGCAAAACAAAGTCAT",1,9.87,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6S C49L D68R",3
"lib2","SARS-CoV-2","GGCAAAACGCCGCTTT",5,118.39,10.27,-0.57,0.05,3,1.01,0,">1 nonsynonymous","Y39V C61L F156Y T201M",4
"lib2","SARS-CoV-2","GGCAAAACGCTTTATA",3,104.01,8.59,-2.25,0.07,2.72,1.08,0,">1 nonsynonymous","Q84S Y119V T148P T201M",4
"lib2","SARS-CoV-2","GGCAAAACTTTACCTC",10,200.41,10.25,-0.59,0.03,2.8,1.05,0,">1 nonsynonymous","D98L P149M",2
"lib2","SARS-CoV-2","GGCAAAAGGTATGCAA",4,23.52,8.25,-2.58,0.18,1.91,1.05,0.01,">1 nonsynonymous","Q79M L162F T201E",3
"lib2","SARS-CoV-2","GGCAAAATAAGCATAT",3,41.95,6,-4.84,1.41,1.5,1.07,0.01,">1 nonsynonymous","R25D Y35P T46L K94S S129P",5
"lib2","SARS-CoV-2","GGCAAAATCTGATGGC",9,150.48,10.47,-0.37,0.04,2.98,1.03,0,">1 nonsynonymous","T85S G174R",2
"lib2","SARS-CoV-2","GGCAAAATTCTGGTAT",1,24.07,6.14,-4.69,1.4,1.5,1.19,0.04,">1 nonsynonymous","N58R G146L Q176S",3
"lib2","SARS-CoV-2","GGCAAAATTTCCTATC",3,9.44,6.25,-4.59,1.41,1.5,1.25,0.05,">1 nonsynonymous","T15R K94Q F99L Y121S E135T R179T",6
"lib2","SARS-CoV-2","GGCAAAATTTGGATCC",1,0.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGCAAACATAACTGCC",6,41.38,7.5,-3.34,0.11,1.76,1.07,0,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","GGCAAACATCAATAAC",4,2.43,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib2","SARS-CoV-2","GGCAAACCTAAGAATA",5,83.64,9.35,-1.49,0.1,1.57,1.13,0,">1 nonsynonymous","Y35L Y91R D98H K128P E141G",5
"lib2","SARS-CoV-2","GGCAAACCTGTATTTT",2,46.97,10.78,-0.05,0.06,2.95,1.06,0,">1 nonsynonymous","L5E T63L",2
"lib2","SARS-CoV-2","GGCAAACGCACTGCTA",5,41.37,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","T46F P54H F99S S129Q I142F V173H",6
"lib2","SARS-CoV-2","GGCAAAGAAGAATATG",4,24.28,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C49L W106D T148V G174Q",4
"lib2","SARS-CoV-2","GGCAAAGACAGTCATT",7,143.29,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y91E Y178D",2
"lib2","SARS-CoV-2","GGCAAAGACGATTATA",13,37.77,8.18,-2.66,0.31,1.5,1.06,0.04,">1 nonsynonymous","F47G A145S",2
"lib2","SARS-CoV-2","GGCAAAGAGATATAGG",3,12.21,10.67,-0.16,0.15,2.72,1,0.01,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","GGCAAAGCCCTTTATC",8,77.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L38V F44V T63V V103G S147G Q163H",6
"lib2","SARS-CoV-2","GGCAAAGGATATTGAA",15,233.38,8.55,-2.28,0.12,2.67,1.08,0,">1 nonsynonymous","I28A Y119S",2
"lib2","SARS-CoV-2","GGCAAAGTACATCAAC",3,33.69,10.3,-0.53,0.08,2.97,1.06,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","GGCAAATAAAAAATAT",4,0,NA,NA,NA,NA,NA,NA,"stop","N64D V103* Y119F",3
"lib2","SARS-CoV-2","GGCAAATACACAGGAT",1,6.01,6.33,-4.51,2,1.5,1.12,0.05,">1 nonsynonymous","F99I D137G",2
"lib2","SARS-CoV-2","GGCAAATATATAGTCA",2,69.79,10.74,-0.1,0.03,3,1.02,0,">1 nonsynonymous","L5G V37R",2
"lib2","SARS-CoV-2","GGCAAATCATAACCAA",2,22.15,10.67,-0.16,0.05,3,1.02,0,">1 nonsynonymous","V115L F160M K198P",3
"lib2","SARS-CoV-2","GGCAAATCGGTTTCAT",10,104,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F17I D97I T140A T170I",4
"lib2","SARS-CoV-2","GGCAAATCTATAATAT",9,75.13,6.06,-4.78,1.17,1.5,1.19,0.02,">1 nonsynonymous","P96L G117S F126D S200L",4
"lib2","SARS-CoV-2","GGCAAATGTTGACGAA",9,341.42,10.69,-0.15,0.03,2.94,1.05,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","GGCAAATTAATGTATT",3,14.23,10.59,-0.25,0.13,2.84,1.09,0.01,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","GGCAAATTAGAATAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64S F99I D112E Y119P",4
"lib2","SARS-CoV-2","GGCAAATTCGGGAAAG",4,67.41,8.91,-1.93,0.14,1.7,1.1,0.01,">1 nonsynonymous","G83D Q144L",2
"lib2","SARS-CoV-2","GGCAAATTTCAGGGAA",5,0.11,NA,NA,NA,NA,NA,NA,"stop","G51F G86W P133N S147* N171L",5
"lib2","SARS-CoV-2","GGCAACAAATTCAGGA",1,5.73,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10M G117V K128R T148D Y175S",5
"lib2","SARS-CoV-2","GGCAACAAATTCTCAC",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W T85C G174C",3
"lib2","SARS-CoV-2","GGCAACAATAACGGCA",28,158.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6S V20E G174C",3
"lib2","SARS-CoV-2","GGCAACACAACTAACA",5,11.45,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","C49D C61G",2
"lib2","SARS-CoV-2","GGCAACACACGCATCA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58V Q84Y R179L",3
"lib2","SARS-CoV-2","GGCAACACATGAATCG",4,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L T63V D68E S184Y",4
"lib2","SARS-CoV-2","GGCAACAGAAAAGTAA",2,66.2,10.79,-0.05,0.03,2.92,1.07,0,">1 nonsynonymous","N1S D90S",2
"lib2","SARS-CoV-2","GGCAACAGGGAGTGAG",4,0,NA,NA,NA,NA,NA,NA,"stop","N4R S45I N64D V77M K87* D137Y",6
"lib2","SARS-CoV-2","GGCAACATAACGCACT",4,43.24,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N110D Y119M D137R S184Q T201R",5
"lib2","SARS-CoV-2","GGCAACATGCGGATTA",6,66.32,10.83,0,0.05,2.84,1.15,0,"1 nonsynonymous","L122M",1
"lib2","SARS-CoV-2","GGCAACCAAAAAATGG",2,164.53,8.3,-2.54,0.13,1.92,1.1,0.01,">1 nonsynonymous","D97I Y119V Y178L",3
"lib2","SARS-CoV-2","GGCAACCAATTGCATA",6,1.75,NA,NA,NA,NA,NA,NA,"stop","E10* Y50L D90I C102F S129I",5
"lib2","SARS-CoV-2","GGCAACCACCTCGAAG",4,17.62,8.96,-1.88,0.16,1.71,1.05,0.01,">1 nonsynonymous","N1Q R127L",2
"lib2","SARS-CoV-2","GGCAACCACTCCTTGA",5,33.31,7.78,-3.06,0.14,1.5,1.1,0.01,">1 nonsynonymous","D90N F126V Y165I",3
"lib2","SARS-CoV-2","GGCAACCATCCCACTT",3,3.03,NA,NA,NA,NA,NA,NA,"stop","A14* F47G F62H",3
"lib2","SARS-CoV-2","GGCAACCATTAGCGAA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F G9T V71L P82T P96T F126R Y143M",7
"lib2","SARS-CoV-2","GGCAACCGGGAAATGC",2,35.12,10.76,-0.07,0.08,2.82,1.09,0,">1 nonsynonymous","T3L N120H S147T",3
"lib2","SARS-CoV-2","GGCAACCTAAGTGAGG",2,13.36,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S45Q P82M Y119W",3
"lib2","SARS-CoV-2","GGCAACCTGCACAAAA",5,61.15,8.69,-2.14,0.09,2.83,1.12,0,">1 nonsynonymous","I138R T170C",2
"lib2","SARS-CoV-2","GGCAACGACCACTACC",2,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R F99H N151S V181E T201R",5
"lib2","SARS-CoV-2","GGCAACGATCTTAAAT",5,8.09,NA,NA,NA,NA,NA,NA,"stop","I72* A89S Q176H",3
"lib2","SARS-CoV-2","GGCAACGATTAATCAA",7,1.68,NA,NA,NA,NA,NA,NA,"stop","A33* I80W G117F F167L",4
"lib2","SARS-CoV-2","GGCAACGCATTAAAAA",6,162.27,10.84,0,0.05,2.85,1.15,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","GGCAACGCGATATCAT",15,24.06,7.35,-3.49,0.29,1.92,1.19,0.02,">1 nonsynonymous","C49R I104D",2
"lib2","SARS-CoV-2","GGCAACGTACTTGGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D90H N120* V182G",3
"lib2","SARS-CoV-2","GGCAACGTTCTGAGAG",3,11.61,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F99S W106A",2
"lib2","SARS-CoV-2","GGCAACTCCAAAAAAA",4,149.61,8.89,-1.94,0.05,2.91,1.13,0,">1 nonsynonymous","C61Q D98E G166R V194L",4
"lib2","SARS-CoV-2","GGCAACTGATGAACGT",5,2.71,NA,NA,NA,NA,NA,NA,"stop","L122* Y143W",2
"lib2","SARS-CoV-2","GGCAACTGTTTAGACA",5,115.55,10.86,0.03,0.06,2.87,1.15,0,"1 nonsynonymous","E154R",1
"lib2","SARS-CoV-2","GGCAACTTAAGTTGTT",1,13.87,10.39,-0.45,0.06,2.85,1.01,0,">1 nonsynonymous","S29M A33I T63S N130G",4
"lib2","SARS-CoV-2","GGCAACTTCACCCCGA",3,50.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9R F156R L162Y Q176I",4
"lib2","SARS-CoV-2","GGCAAGAGAGACGGAA",4,23,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N58T N64V D97L Y119V S129T L183R G196R",7
"lib2","SARS-CoV-2","GGCAAGAGCAGCCCGG",6,45.76,6.16,-4.68,0.56,1.5,1.12,0.01,">1 nonsynonymous","R27C D68K A105Q K128E",4
"lib2","SARS-CoV-2","GGCAAGCGTCCAACTA",22,1421.72,8.67,-2.16,0.05,2.72,1.07,0,">1 nonsynonymous","F156W Q176A",2
"lib2","SARS-CoV-2","GGCAAGCTAAATATTC",4,3.14,NA,NA,NA,NA,NA,NA,"stop","T55* I104K S200L",3
"lib2","SARS-CoV-2","GGCAAGCTCAATATGA",2,122.24,10.83,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCAAGGACCTTGACT",10,66.71,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F62D G83D L95N",3
"lib2","SARS-CoV-2","GGCAAGGATCAGGTTA",2,26.64,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19N G51D S108W P149F",4
"lib2","SARS-CoV-2","GGCAAGGATTAAGAAG",7,10.95,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A89D A145R L183P",3
"lib2","SARS-CoV-2","GGCAAGGGACTCGCAT",3,79.99,10.51,-0.33,0.03,2.95,1.05,0,">1 nonsynonymous","P7L Y143F",2
"lib2","SARS-CoV-2","GGCAAGGTACGAGTCA",5,30.64,6.09,-4.74,0.93,1.5,1.12,0.03,">1 nonsynonymous","Y21G S36H P169T",3
"lib2","SARS-CoV-2","GGCAAGTAAATAGATA",3,36.75,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","P7V V32E Y50D L60S L95G L125P K132C Y165C",8
"lib2","SARS-CoV-2","GGCAAGTAGTTTTACT",1,5.85,10.77,-0.06,0.08,2.9,1.05,0,"1 nonsynonymous","E186K",1
"lib2","SARS-CoV-2","GGCAAGTCAAGTACGC",5,193.28,9.61,-1.22,0.05,2.78,1.11,0,">1 nonsynonymous","Y35Q C61S G146S F156L",4
"lib2","SARS-CoV-2","GGCAAGTCATAAACGG",4,61.48,9.96,-0.87,0.06,2.85,1.13,0,">1 nonsynonymous","S36K D90Y K114F S129T F156P P197W",6
"lib2","SARS-CoV-2","GGCAAGTCTGTCATGT",8,0.46,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","GGCAAGTGCATCATTG",6,92.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23Q L38V T55E I80T D90C Y119L",6
"lib2","SARS-CoV-2","GGCAAGTTCGTTAACC",2,14.48,6.57,-4.26,0.47,1.5,1.13,0.03,">1 nonsynonymous","S19K S41A T100E",3
"lib2","SARS-CoV-2","GGCAAGTTGCTGTACA",2,18.89,10.74,-0.09,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCAATAAAAACAATC",1,15.12,11,0.16,0.2,2.89,1.08,0.01,">1 nonsynonymous","T63Y T148S",2
"lib2","SARS-CoV-2","GGCAATAAAATGTCCG",13,171.93,8.32,-2.52,0.13,3,1.07,0.01,"1 nonsynonymous","F126S",1
"lib2","SARS-CoV-2","GGCAATAATAACCACC",6,23.67,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L57N I104R",2
"lib2","SARS-CoV-2","GGCAATACAAGACCCC",23,380.43,10.3,-0.53,0.03,2.84,1.09,0,">1 nonsynonymous","G9S V65R",2
"lib2","SARS-CoV-2","GGCAATACCAAAAATC",9,7.01,NA,NA,NA,NA,NA,NA,"stop","E10G L57* I88* K114E E154D",5
"lib2","SARS-CoV-2","GGCAATACCCGCCGAG",1,18.55,8.22,-2.62,0.1,2.96,1,0,">1 nonsynonymous","D98L A145D",2
"lib2","SARS-CoV-2","GGCAATACCCTATATA",1,271.96,10.79,-0.04,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCAATACCTTCCAAA",13,149.85,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V11I F99S",2
"lib2","SARS-CoV-2","GGCAATACGATTATTA",4,54.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16W L38H F62Y F126R T170C",5
"lib2","SARS-CoV-2","GGCAATACTTTATGTA",2,50.2,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","R16I G101S W106V T140W P169R G172I",6
"lib2","SARS-CoV-2","GGCAATAGATAATCCT",4,71,10.18,-0.65,0.13,2.41,1,0.01,">1 nonsynonymous","A42K E135L N151D",3
"lib2","SARS-CoV-2","GGCAATAGGACAGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6R D90P N107M Y119*",4
"lib2","SARS-CoV-2","GGCAATCTAACCTAAT",6,21.11,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C61T I72D V77R A105R N120P S129L",6
"lib2","SARS-CoV-2","GGCAATGCTCTAGGGT",2,0.51,NA,NA,NA,NA,NA,NA,"stop","W23* N109Y",2
"lib2","SARS-CoV-2","GGCAATTCCTAATCCC",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44N N64L K128D",3
"lib2","SARS-CoV-2","GGCAATTGCGAGCGAC",2,45.36,10.82,-0.01,0.07,2.83,1.14,0,"1 nonsynonymous","A192G",1
"lib2","SARS-CoV-2","GGCAATTGCGTGTCAG",2,0.51,NA,NA,NA,NA,NA,NA,"stop","S19*",1
"lib2","SARS-CoV-2","GGCAATTGTATACCGA",3,117.28,9.7,-1.13,0.06,2.57,1.05,0,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","GGCAATTTTTGCACCC",9,59.46,6.13,-4.71,0.92,1.5,1.22,0.03,">1 nonsynonymous","Y21T G83C Y91R K132M C158L",5
"lib2","SARS-CoV-2","GGCACAAAAGTGCCTA",2,5.79,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41H K48N I88L Y175V K198E",5
"lib2","SARS-CoV-2","GGCACAAATATTCCAG",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107W V173P",2
"lib2","SARS-CoV-2","GGCACAAATCTCTAAA",1,16.77,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T63M Y143M G166F",3
"lib2","SARS-CoV-2","GGCACAAATGTTAATA",18,135.3,6,-4.84,1.91,3,1.14,0,">1 nonsynonymous","N24H F99G P149H",3
"lib2","SARS-CoV-2","GGCACAAGGTGCCCGG",5,145.32,10.79,-0.05,0.07,2.87,1.09,0,"1 nonsynonymous","S184C",1
"lib2","SARS-CoV-2","GGCACAAGTTCTTGAC",1,58.15,9.53,-1.31,0.08,2.8,1.09,0,">1 nonsynonymous","N64F N120T",2
"lib2","SARS-CoV-2","GGCACAATAGGGTTTA",7,36.32,9.64,-1.19,0.1,2.13,1.07,0,"1 nonsynonymous","V11N",1
"lib2","SARS-CoV-2","GGCACACAAATTCTTC",1,13.23,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F8Q Y35T K48L L60T T85Y I88P",6
"lib2","SARS-CoV-2","GGCACACATCCGTAAT",9,11.78,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13A E76Y K94D",3
"lib2","SARS-CoV-2","GGCACACCAACACTAG",2,0.97,NA,NA,NA,NA,NA,NA,"stop","Y35M G101L N120S F167*",4
"lib2","SARS-CoV-2","GGCACACGACAGCCAC",2,21.04,10.6,-0.23,0.1,2.75,1.26,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","GGCACACTATGGATTA",4,47.11,9.31,-1.52,0.11,1.84,1.09,0.01,">1 nonsynonymous","I2M A22M P96R",3
"lib2","SARS-CoV-2","GGCACAGAGGTACGGC",2,13.44,9.76,-1.07,0.15,1.88,1.17,0.01,">1 nonsynonymous","C6I F12T",2
"lib2","SARS-CoV-2","GGCACAGGTAAGCCTG",2,35.81,6.07,-4.76,1.45,1.5,1.19,0.07,">1 nonsynonymous","G9S S29R F167G",3
"lib2","SARS-CoV-2","GGCACATAAACGTAAA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55F G101L S108Q G174L",4
"lib2","SARS-CoV-2","GGCACATGACTAAACT",7,76.67,8.4,-2.43,0.11,1.93,1.1,0.01,">1 nonsynonymous","D98A G152T P169C",3
"lib2","SARS-CoV-2","GGCACATGCAGTCGAA",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","GGCACATGCTTTATCA",2,22.73,6,-4.84,1.41,3,1.12,0.01,">1 nonsynonymous","S36R D137R G146M",3
"lib2","SARS-CoV-2","GGCACATTACATCGTA",12,49.3,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G74P V103Y I138A Q168L",4
"lib2","SARS-CoV-2","GGCACATTATTAAGAT",4,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R G86V V180W",3
"lib2","SARS-CoV-2","GGCACCACTTCAAGAG",1,69.01,10.16,-0.68,0.04,2.95,1,0,">1 nonsynonymous","S36F A42S L60V",3
"lib2","SARS-CoV-2","GGCACCAGACTAGGCC",6,51.54,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K48Y S69T G116S R127V F134G",5
"lib2","SARS-CoV-2","GGCACCATCATGGACA",7,129.2,7.32,-3.52,0.29,1.5,1.08,0.03,">1 nonsynonymous","E10R W23S G83K",3
"lib2","SARS-CoV-2","GGCACCCATTTAAAAT",2,86.49,9.76,-1.07,0.07,2.21,1.06,0,">1 nonsynonymous","Q84Y I138F",2
"lib2","SARS-CoV-2","GGCACCCCCGATTGAA",2,28.13,9.02,-1.81,0.09,2.71,1.07,0,">1 nonsynonymous","E10L S36I K114L V153N",4
"lib2","SARS-CoV-2","GGCACCCCGACGCTGT",10,68.29,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","K26P Y39L T85A E135T",4
"lib2","SARS-CoV-2","GGCACCGCATCTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* D97S",2
"lib2","SARS-CoV-2","GGCACCGCTATGTTAC",7,60.39,6.04,-4.79,0.63,1.5,1.14,0.01,"1 nonsynonymous","L95Q",1
"lib2","SARS-CoV-2","GGCACCGTGAACATAG",5,72.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90C G155I N171H Q176T V182M",5
"lib2","SARS-CoV-2","GGCACCTCTCACTTCC",8,2.69,NA,NA,NA,NA,NA,NA,"stop","L57F G86Q A145I Y175*",4
"lib2","SARS-CoV-2","GGCACCTCTTACATCT",1,8.17,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6L A89L E141I",3
"lib2","SARS-CoV-2","GGCACCTGAGATTCAA",6,85.84,10.9,0.06,0.05,2.96,1.06,0,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","GGCACCTTATTTAACT",4,53.52,7.72,-3.12,0.14,1.62,1.1,0.01,">1 nonsynonymous","I2P C150S",2
"lib2","SARS-CoV-2","GGCACGAACAACAAAA",7,85.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35N K48D K56F S69L C150P",5
"lib2","SARS-CoV-2","GGCACGACATCCTACA",6,81.37,7.24,-3.6,0.06,1.83,1.1,0,">1 nonsynonymous","I138V C150V",2
"lib2","SARS-CoV-2","GGCACGAGCACAATAC",1,34.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86R N110W F167K",3
"lib2","SARS-CoV-2","GGCACGAGTGGCAGAT",6,54.15,8.85,-1.98,0.11,1.94,1.11,0,">1 nonsynonymous","R16L A22L T100V N120T",4
"lib2","SARS-CoV-2","GGCACGATCCACTAGT",3,7.17,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33M I88N L95S K114L",4
"lib2","SARS-CoV-2","GGCACTAAATGGGGAG",6,43.5,9.52,-1.31,0.06,1.95,1.04,0,">1 nonsynonymous","A33G T100D",2
"lib2","SARS-CoV-2","GGCACTATAAGCAGTT",3,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L K48P D90M A105R Y165H H189S",6
"lib2","SARS-CoV-2","GGCACTATAGCTCAGA",5,41.59,10.69,-0.14,0.06,2.93,1.02,0,">1 nonsynonymous","T3K K26E",2
"lib2","SARS-CoV-2","GGCACTATCCTCGGCA",6,34.54,6.24,-4.6,0.5,2.43,1.29,0.01,">1 nonsynonymous","S41L I88W D97M K128F F160Q",5
"lib2","SARS-CoV-2","GGCACTATCTAGGCCA",16,337.89,9.1,-1.74,0.05,2.7,1.1,0,">1 nonsynonymous","N24S V37R N107D",3
"lib2","SARS-CoV-2","GGCACTATGTAAGACA",13,41.88,6.71,-4.13,0.44,1.5,1.14,0.03,">1 nonsynonymous","C49N G101Q",2
"lib2","SARS-CoV-2","GGCACTCAGTCGGAGA",8,155.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86L K94G D97K S129L",4
"lib2","SARS-CoV-2","GGCACTCATAACAAAT",1,36.57,7.96,-2.88,0.26,1.5,1.11,0.03,">1 nonsynonymous","L38H G152V T201S",3
"lib2","SARS-CoV-2","GGCACTCTACTATATA",1,19.93,10.03,-0.81,0.14,2.32,1.08,0.01,">1 nonsynonymous","K56I N64F K94A",3
"lib2","SARS-CoV-2","GGCACTCTGAAATAAT",5,33.46,10.55,-0.28,0.05,2.95,1.02,0,">1 nonsynonymous","K114Q P133S",2
"lib2","SARS-CoV-2","GGCACTGACGTTACAA",2,43.67,10.16,-0.68,0.12,2.56,1.05,0.01,">1 nonsynonymous","L57S A105S",2
"lib2","SARS-CoV-2","GGCACTGCTGATTCCC",5,88,10.6,-0.24,0.04,2.95,1.08,0,">1 nonsynonymous","S129I K198A",2
"lib2","SARS-CoV-2","GGCACTGCTTAAGAAA",3,36.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N L57K C102L C158Y A192V",5
"lib2","SARS-CoV-2","GGCACTGGAAATGGTA",6,53.51,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T3L R124Q G166F",3
"lib2","SARS-CoV-2","GGCACTGTCGACCCAG",4,1.63,NA,NA,NA,NA,NA,NA,"stop","F8* Y35M C102S L122S",4
"lib2","SARS-CoV-2","GGCACTGTCTATACAC",1,27.29,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","K26P R73E E141N",3
"lib2","SARS-CoV-2","GGCACTGTGTATCTCC",2,82.55,10.87,0.04,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCACTTACAAGACAA",1,41.16,9.49,-1.34,0.31,1.5,1,0.06,">1 nonsynonymous","V77F N92H S200W",3
"lib2","SARS-CoV-2","GGCACTTCACGCTTCA",3,52.81,9.86,-0.98,0.06,2.71,1.04,0,">1 nonsynonymous","I2M C31T G51R",3
"lib2","SARS-CoV-2","GGCACTTCCCCAGAGT",2,42.46,10.05,-0.79,0.06,2.32,1.03,0,">1 nonsynonymous","G51V K87F",2
"lib2","SARS-CoV-2","GGCACTTCGATGGTTG",3,57.83,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G9T K26L G86F P96K A105I G117Y R136K",7
"lib2","SARS-CoV-2","GGCACTTGTATTCTTG",5,132.77,10.44,-0.39,0.05,2.88,1.09,0,">1 nonsynonymous","N4S V32S G83F K128A",4
"lib2","SARS-CoV-2","GGCAGAAACTAAACAG",3,54.28,10.39,-0.45,0.05,2.87,1.14,0,">1 nonsynonymous","V32A H189Y C195N",3
"lib2","SARS-CoV-2","GGCAGAAGACGACATA",5,179.46,8.81,-2.03,0.12,2.45,1.14,0.01,">1 nonsynonymous","F62K N151L T170Y",3
"lib2","SARS-CoV-2","GGCAGAAGGAACTTAA",5,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27I W106S S139W G155H",4
"lib2","SARS-CoV-2","GGCAGAATATGGACGT",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L G83P K87T",3
"lib2","SARS-CoV-2","GGCAGACAGAGTCAAC",1,0.89,NA,NA,NA,NA,NA,NA,"stop","I2* G9S T15I",3
"lib2","SARS-CoV-2","GGCAGACATATGAACC",8,125.64,6,-4.84,1.55,1.5,1.16,0.01,">1 nonsynonymous","R124S Q144S",2
"lib2","SARS-CoV-2","GGCAGACCAATTTAGT",4,20.13,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","A14N V77K D90I N120Q",4
"lib2","SARS-CoV-2","GGCAGACCAGTTGCCC",1,9.12,10.07,-0.76,0.22,2.33,1.13,0.02,"1 nonsynonymous","I80M",1
"lib2","SARS-CoV-2","GGCAGACCGATACTAT",2,30.88,10.03,-0.8,0.04,2.93,1.04,0,">1 nonsynonymous","P149F G155M",2
"lib2","SARS-CoV-2","GGCAGACCTCCTATAA",2,39.36,10.07,-0.77,0.1,2.72,1.17,0,">1 nonsynonymous","Y39S F44Y S164L",3
"lib2","SARS-CoV-2","GGCAGACGCTACCAGC",4,94.55,10.85,0.01,0.06,2.98,1.05,0,">1 nonsynonymous","R27K S45T",2
"lib2","SARS-CoV-2","GGCAGAGATTTTCACA",3,21.46,9.57,-1.27,0.1,2.46,1.2,0.01,">1 nonsynonymous","I2R S41W A105I",3
"lib2","SARS-CoV-2","GGCAGAGCACCTTATG",2,10.4,10.34,-0.5,0.15,2.61,1,0.01,">1 nonsynonymous","P82K L122R",2
"lib2","SARS-CoV-2","GGCAGATACCCTTTTA",3,49.13,9.6,-1.23,0.09,2.51,1.06,0,">1 nonsynonymous","A42V C61L G155L",3
"lib2","SARS-CoV-2","GGCAGATCACGGCCCT",1,54.39,9.59,-1.25,0.08,2.38,1.04,0,">1 nonsynonymous","I2T G51V G155N",3
"lib2","SARS-CoV-2","GGCAGATTAACGGATT",15,239.84,6,-4.84,1.35,1.5,1.14,0.01,">1 nonsynonymous","F12R K114T Y119E",3
"lib2","SARS-CoV-2","GGCAGATTGAGGCAAG",10,1.02,NA,NA,NA,NA,NA,NA,"stop","T63* G152C",2
"lib2","SARS-CoV-2","GGCAGCAAGCCCCAAA",6,96.55,6,-4.84,0.58,1.82,1.11,0.01,">1 nonsynonymous","I2K P177F",2
"lib2","SARS-CoV-2","GGCAGCACTACAGATT",8,15.55,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S41I C49R C158V",3
"lib2","SARS-CoV-2","GGCAGCATATAAAGTC",8,44.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L A33L P82W F160A Q176Y",5
"lib2","SARS-CoV-2","GGCAGCATTCTTTCAT",2,69.88,10.97,0.14,0.06,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCAGCCAGTAGGGAT",1,30.88,10.67,-0.17,0.04,2.99,1,0,">1 nonsynonymous","Y35I W106M",2
"lib2","SARS-CoV-2","GGCAGCCGACATACCG",1,31.85,10.86,0.03,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCAGCCTCCATGCAA",7,82.13,8.66,-2.17,0.1,2.42,1.14,0,">1 nonsynonymous","N13S G117A",2
"lib2","SARS-CoV-2","GGCAGCGGTCACATTG",1,15.76,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V52C G117V Y119E N157G F167C",5
"lib2","SARS-CoV-2","GGCAGCTAAAATTACT",3,10.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3P K56P D112I D137H",4
"lib2","SARS-CoV-2","GGCAGCTAACTAAACC",19,150.92,8.89,-1.95,0.06,1.97,1.07,0,">1 nonsynonymous","C61D D90L G152C",3
"lib2","SARS-CoV-2","GGCAGCTAAGGGGCAG",2,47.36,10.08,-0.76,0.1,2.55,1.05,0,">1 nonsynonymous","Y35Q F44T",2
"lib2","SARS-CoV-2","GGCAGCTGCATGCTTT",3,33.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V71H C158M",2
"lib2","SARS-CoV-2","GGCAGGAAAAATACGC",21,708.12,10.5,-0.33,0.02,2.95,1.03,0,">1 nonsynonymous","K87Y E141L",2
"lib2","SARS-CoV-2","GGCAGGATTGTATCAG",2,55.27,9.06,-1.78,0.24,1.85,1.14,0.02,">1 nonsynonymous","P133Y Q163K Q176M",3
"lib2","SARS-CoV-2","GGCAGGCTGCAATGAC",4,37.4,6,-4.84,1.85,1.5,1.12,0.02,">1 nonsynonymous","A14V F99C L131A S139R T201M",5
"lib2","SARS-CoV-2","GGCAGGGATGGCATAG",3,54.98,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G9L C61P D97R Y175V G196V",5
"lib2","SARS-CoV-2","GGCAGGTACCTAAGGG",7,2.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","GGCAGGTACTCTAGAG",9,132.12,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F17I L95S G116V",3
"lib2","SARS-CoV-2","GGCAGGTATAAAATAT",9,16.78,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I28S Y50L L125T F167P S184L",5
"lib2","SARS-CoV-2","GGCAGTAAAATCTCCA",1,5.55,6,-4.84,2,3,1.03,0,">1 nonsynonymous","K48L Y93I",2
"lib2","SARS-CoV-2","GGCAGTAAAGTCAGAG",3,32.47,10.35,-0.49,0.06,2.87,1.03,0,">1 nonsynonymous","N40W S139N",2
"lib2","SARS-CoV-2","GGCAGTAAGCAAGGAA",1,38.96,10.25,-0.58,0.07,2.79,1,0,"1 nonsynonymous","C31R",1
"lib2","SARS-CoV-2","GGCAGTACCCTATTTA",6,128.55,8.84,-1.99,0.06,2.77,1.05,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","GGCAGTACCGCGAGCA",9,47.74,7.98,-2.85,0.22,1.5,1.11,0.02,">1 nonsynonymous","E10S S36L S53V L131C T201M",5
"lib2","SARS-CoV-2","GGCAGTATGAATATAT",12,278.41,8.29,-2.55,0.11,2.58,1.06,0,"1 nonsynonymous","Y175L",1
"lib2","SARS-CoV-2","GGCAGTCATAGTAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92A Q144T",2
"lib2","SARS-CoV-2","GGCAGTGAATAGGTTT",1,16.97,9.92,-0.92,0.24,1.83,1,0.03,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","GGCAGTGCTAGATGCA",7,143.48,10.47,-0.36,0.06,2.83,1.13,0,">1 nonsynonymous","S43F A81R",2
"lib2","SARS-CoV-2","GGCAGTTAGTTGTAGT",1,25.6,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2H K26Q P96H N107S E135R",5
"lib2","SARS-CoV-2","GGCATAAACAAAAAGA",2,54.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29K L95I V181G",3
"lib2","SARS-CoV-2","GGCATAAAGCACAGGT",6,60.32,8.47,-2.37,0.21,1.5,1.18,0.01,">1 nonsynonymous","P96L L111Q L188V",3
"lib2","SARS-CoV-2","GGCATAACTATCGCCA",2,37.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V Y50L T63S A105R",4
"lib2","SARS-CoV-2","GGCATAATGAGGAATA",5,24.84,10.48,-0.36,0.07,2.76,1.13,0,">1 nonsynonymous","D75Q K94R A192S",3
"lib2","SARS-CoV-2","GGCATAATTAAAATTT",14,0.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","GGCATACATATCCAAC",3,88.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10P Y50S K87P",3
"lib2","SARS-CoV-2","GGCATACCTCTAAATT",8,27.74,9.26,-1.58,0.14,2.13,1.07,0.01,">1 nonsynonymous","A42R Y91D N110T",3
"lib2","SARS-CoV-2","GGCATACCTTACCCTT",6,24.84,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F99S K132T",2
"lib2","SARS-CoV-2","GGCATACTAACAAGCG",9,188.14,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K87E T100D R127F E141K Q163M F185Q",6
"lib2","SARS-CoV-2","GGCATACTATATCTAC",10,116.79,10.83,-0.01,0.04,2.8,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATACTGAGATGAG",1,34.84,8.85,-1.99,0.07,2.87,1.06,0,">1 nonsynonymous","S43T D97F Y119L",3
"lib2","SARS-CoV-2","GGCATAGAAAGTCATA",1,7.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6Y V52L D137N",3
"lib2","SARS-CoV-2","GGCATAGAACATTGAA",2,35.9,10.88,0.04,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATAGAAGTAAGAA",6,125.96,9.84,-1,0.08,2.52,1.04,0,">1 nonsynonymous","F12W K128S",2
"lib2","SARS-CoV-2","GGCATAGACAACAAAA",3,5.14,10.41,-0.42,0.15,2.77,1,0.01,">1 nonsynonymous","L57R Y178F",2
"lib2","SARS-CoV-2","GGCATAGGGACTTATA",1,6.06,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A89K L122M F185R",3
"lib2","SARS-CoV-2","GGCATATGAGGGACAT",5,1.3,NA,NA,NA,NA,NA,NA,"stop","T3* F47C Y93F",3
"lib2","SARS-CoV-2","GGCATATGATCAAGAG",6,57.35,10.41,-0.43,0.05,2.95,1.02,0,">1 nonsynonymous","V52C G116A",2
"lib2","SARS-CoV-2","GGCATATGCCTCCCCA",8,49.48,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V71M F99Q",2
"lib2","SARS-CoV-2","GGCATATTAAATAGTA",9,79.61,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10V I88S F160I",3
"lib2","SARS-CoV-2","GGCATATTAAGCGATC",15,8.49,NA,NA,NA,NA,NA,NA,"stop","V11G W106* I138E G155K",4
"lib2","SARS-CoV-2","GGCATATTACGAACAA",6,62.38,10.88,0.04,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATATTCCGAATAG",7,0.87,NA,NA,NA,NA,NA,NA,"stop","C6* K87D Q144Y E186D",4
"lib2","SARS-CoV-2","GGCATATTCCTGTACG",1,15.48,10.89,0.06,0.06,2.99,1.01,0,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","GGCATCACGCACGACA",2,42.37,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V37F N58H I80H S129K",4
"lib2","SARS-CoV-2","GGCATCATAAATAATA",5,26.57,10.4,-0.44,0.1,2.83,1,0.01,">1 nonsynonymous","T55N N107A",2
"lib2","SARS-CoV-2","GGCATCATCAAATATG",2,126.04,9.76,-1.07,0.06,2.47,1.03,0,">1 nonsynonymous","N64E D98I G155M",3
"lib2","SARS-CoV-2","GGCATCATCAACGAGG",1,19.76,11.09,0.26,0.28,2.55,1,0.04,">1 nonsynonymous","K48Q Y143F",2
"lib2","SARS-CoV-2","GGCATCATGACGTAAC",7,87.82,10.31,-0.52,0.04,3,1.02,0,">1 nonsynonymous","C61K I80L L122R S147P F156S",5
"lib2","SARS-CoV-2","GGCATCCAAGTCGATC",5,44.71,10.85,0.02,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATCCTAACCGGGT",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88P I104S T201V",3
"lib2","SARS-CoV-2","GGCATCCTAAGGCAGG",2,11.81,10.18,-0.66,0.1,2.83,1.04,0,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","GGCATCTAGGGTCCAT",4,0,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib2","SARS-CoV-2","GGCATCTATCGCTTTT",2,6.23,10.22,-0.61,0.1,3,1,0,">1 nonsynonymous","I28F K56W Y91L V115S",4
"lib2","SARS-CoV-2","GGCATCTCCGTCCACT",11,109.37,9.83,-1.01,0.1,2.49,1.06,0,">1 nonsynonymous","N40R Y91V",2
"lib2","SARS-CoV-2","GGCATCTCTTATAGTA",2,18.39,6,-4.84,2,1.86,1.2,0.01,">1 nonsynonymous","Y66E K94F",2
"lib2","SARS-CoV-2","GGCATGAAATAATAGG",2,37.9,6,-4.84,2,3,1.16,0,">1 nonsynonymous","V77E I80F T100H Y143G L187R",5
"lib2","SARS-CoV-2","GGCATGAAGGGTCTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","A18* S36E T63A G152D",4
"lib2","SARS-CoV-2","GGCATGACGAGTAATA",2,0,NA,NA,NA,NA,NA,NA,"stop","V11A N58T D97I L122*",4
"lib2","SARS-CoV-2","GGCATGAGCCCAGACT",1,8.93,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F8Y V77E Y91A T100P K199N",5
"lib2","SARS-CoV-2","GGCATGATAGGCGACG",5,74.41,10.79,-0.05,0.07,2.91,1.09,0,">1 nonsynonymous","T3M N151Q",2
"lib2","SARS-CoV-2","GGCATGCATTGCTCAG",3,11.99,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I2L C61R F99V V181G",4
"lib2","SARS-CoV-2","GGCATGCCAGGAGGAC",1,38.27,10.63,-0.21,0.05,2.91,1.12,0,">1 nonsynonymous","R16L T46L",2
"lib2","SARS-CoV-2","GGCATGCCCACGCGAG",4,34.32,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","G51S D98P F167V",3
"lib2","SARS-CoV-2","GGCATGCCCTAAGAGT",1,50.52,10.15,-0.68,0.06,2.66,1.07,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","GGCATGCTACGCCAAA",6,68.16,10.8,-0.04,0.08,2.92,1.04,0,"1 nonsynonymous","S200P",1
"lib2","SARS-CoV-2","GGCATGTACTATACTA",5,83.62,7.58,-3.26,0.17,1.5,1.1,0.01,">1 nonsynonymous","R136T P177S",2
"lib2","SARS-CoV-2","GGCATGTCCTCAACTT",4,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H N13S I80G P96I C102A F185N",6
"lib2","SARS-CoV-2","GGCATGTGTGCCCCAT",13,284,8.84,-1.99,0.07,2.08,1.07,0,">1 nonsynonymous","T85K T140G Q176H K199N",4
"lib2","SARS-CoV-2","GGCATGTTCGGCGTCA",4,0.46,NA,NA,NA,NA,NA,NA,"stop","I2F F8S I72Q G83N A89* I142M L183S",7
"lib2","SARS-CoV-2","GGCATTAAACCCCCCG",3,121.02,10.88,0.04,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATTAAAGAACCAG",7,72.81,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9S S19L R27Y N64S V71C Y119P V182P",7
"lib2","SARS-CoV-2","GGCATTAAAGTAGTAT",4,33.83,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","K94I W106K",2
"lib2","SARS-CoV-2","GGCATTAATTCGATGG",2,77.14,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G86Y Y165G T201F",3
"lib2","SARS-CoV-2","GGCATTACAAAATACA",1,18.78,8,-2.83,0.18,1.57,1.19,0.01,">1 nonsynonymous","L38V S113R",2
"lib2","SARS-CoV-2","GGCATTACAGGGGCTA",1,37.77,10.73,-0.11,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCATTAGTACCACCG",2,28.96,7.53,-3.3,0.18,1.59,1.07,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","GGCATTATGAAGTAGT",2,8.17,10.03,-0.8,0.06,2.95,1.01,0,">1 nonsynonymous","S36I N118Q",2
"lib2","SARS-CoV-2","GGCATTCATTGTTCCC",15,143.14,10.78,-0.05,0.06,2.98,1.05,0,"1 nonsynonymous","L111R",1
"lib2","SARS-CoV-2","GGCATTCCAAAATAGT",10,6.13,NA,NA,NA,NA,NA,NA,"stop","D97* S139L",2
"lib2","SARS-CoV-2","GGCATTCCCCCGAGAA",11,63.07,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T148M P161L",2
"lib2","SARS-CoV-2","GGCATTCGAATTCGTT",15,298.83,10.25,-0.58,0.03,2.92,1.04,0,">1 nonsynonymous","L38W N151Q",2
"lib2","SARS-CoV-2","GGCATTGAACACACGC",3,29.96,7.93,-2.9,0.22,1.5,1.01,0.01,">1 nonsynonymous","Y35L N64E I88T R136H",4
"lib2","SARS-CoV-2","GGCATTGATACGCCCT",13,315.13,10.66,-0.18,0.03,2.89,1.09,0,">1 nonsynonymous","S41Q Q144S Q168A",3
"lib2","SARS-CoV-2","GGCATTGATGCGCTTT",9,56.4,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N40L P96Q R124K N130W",4
"lib2","SARS-CoV-2","GGCATTGATTGGTCCA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","K87E A105* P149S C158R",4
"lib2","SARS-CoV-2","GGCATTGTAACTCTAA",1,22.44,7.97,-2.87,0.21,1.5,1.08,0.02,">1 nonsynonymous","T100N F167L",2
"lib2","SARS-CoV-2","GGCATTTCACCCCTTA",1,6.49,10.72,-0.12,0.09,3,1,0,">1 nonsynonymous","D97L N109L",2
"lib2","SARS-CoV-2","GGCCAAAACGCGGAAA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","F12S L38V F44S F167*",4
"lib2","SARS-CoV-2","GGCCAAACAGGCTCCG",1,11.94,6,-4.84,2,1.5,1.09,0.05,">1 nonsynonymous","C6M R179V L187A",3
"lib2","SARS-CoV-2","GGCCAAATAGCTACTG",4,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y D98N V103F",3
"lib2","SARS-CoV-2","GGCCAAATCTAGACCT",7,147.48,10.03,-0.8,0.06,2.56,1.07,0,">1 nonsynonymous","N13L V37L T55F",3
"lib2","SARS-CoV-2","GGCCAAATGACATCAC",4,26.13,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N64P Y165S",2
"lib2","SARS-CoV-2","GGCCAAATGTGCACGC",1,8.03,10.62,-0.22,0.12,2.91,1.1,0.01,">1 nonsynonymous","N40T F156P",2
"lib2","SARS-CoV-2","GGCCAAATTTTCCACC",3,0.47,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","GGCCAACACACGTCGT",5,30.33,9.89,-0.94,0.05,2.83,1.02,0,">1 nonsynonymous","A81M P149K Q163H",3
"lib2","SARS-CoV-2","GGCCAACCAAGAGCAA",1,11.09,10.79,-0.05,0.05,2.89,1.13,0,">1 nonsynonymous","T3F T201N",2
"lib2","SARS-CoV-2","GGCCAACCCACGTATT",6,23.28,10.13,-0.71,0.04,3,1,0,"1 nonsynonymous","C31N",1
"lib2","SARS-CoV-2","GGCCAACCCATCGCTA",3,15.94,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T15R A42M R124L K128F T140Y",5
"lib2","SARS-CoV-2","GGCCAACCTGTAATTA",11,32.23,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T3F G86V",2
"lib2","SARS-CoV-2","GGCCAACTACCAAAAC",14,102.39,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6R T55N F62L T85S Y119T C150K",6
"lib2","SARS-CoV-2","GGCCAAGAACTTAGCA",12,190.49,10.79,-0.05,0.04,2.92,1.1,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","GGCCAAGAATTCCAGC",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94F L122Y K128E",3
"lib2","SARS-CoV-2","GGCCAAGATCAAACTG",2,30.43,6,-4.84,1.92,1.5,1.08,0,">1 nonsynonymous","F44L Y121S C158M",3
"lib2","SARS-CoV-2","GGCCAATACAGGCCTA",6,260.41,10.3,-0.54,0.03,2.92,1.05,0,">1 nonsynonymous","D75E D98T G196P",3
"lib2","SARS-CoV-2","GGCCAATGAAGACAAT",8,74.13,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","P54K N120S R127F P149Y",4
"lib2","SARS-CoV-2","GGCCAATGCAAGCAAA",3,1.54,NA,NA,NA,NA,NA,NA,"stop","F62* G116*",2
"lib2","SARS-CoV-2","GGCCAATTTATACTGC",8,21.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D90K N118Q F134R P149H",4
"lib2","SARS-CoV-2","GGCCACAAATATTTTA",1,9.35,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","R25A G83R D98T",3
"lib2","SARS-CoV-2","GGCCACAAATGCGGCT",5,99.63,10.41,-0.43,0.02,2.95,1.02,0,">1 nonsynonymous","G9L T46S",2
"lib2","SARS-CoV-2","GGCCACATTGATGAAA",5,53.99,8.17,-2.67,0.12,2.29,1.04,0.01,">1 nonsynonymous","T85L G117W",2
"lib2","SARS-CoV-2","GGCCACATTGTCTTTA",2,105.36,10.36,-0.47,0.04,2.9,1.08,0,">1 nonsynonymous","E10T K56S Q144S",3
"lib2","SARS-CoV-2","GGCCACCTCAAGCCAC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S29I F167A",3
"lib2","SARS-CoV-2","GGCCACGTAACAGTAG",1,26,10.73,-0.1,0.18,2.63,1.14,0.02,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","GGCCACTGTGATTCAG",2,11.65,6.09,-4.75,0.51,3,1.11,0.01,">1 nonsynonymous","Y35F Y50G N64K",3
"lib2","SARS-CoV-2","GGCCACTTAATTCCGT",9,127.93,8.39,-2.44,0.23,1.5,1.02,0.03,">1 nonsynonymous","V37G P96F I138T",3
"lib2","SARS-CoV-2","GGCCACTTCACACATA",2,57.89,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","G172R",1
"lib2","SARS-CoV-2","GGCCACTTTCAACTGA",9,191.3,10.85,0.02,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCAGAAAACCATAG",7,103,10.33,-0.51,0.04,2.77,1.08,0,">1 nonsynonymous","N13Q N58R",2
"lib2","SARS-CoV-2","GGCCAGACACTAAGTA",4,6.36,9.03,-1.81,0.45,2.17,1.13,0.04,">1 nonsynonymous","N13A V115C S164F",3
"lib2","SARS-CoV-2","GGCCAGACGTTCGTTA",11,3.75,NA,NA,NA,NA,NA,NA,"stop","N58H Y93* P169L",3
"lib2","SARS-CoV-2","GGCCAGCAAAGAAAGA",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69M N92M F99T Y165N",4
"lib2","SARS-CoV-2","GGCCAGGAGAATGTAG",20,619,9.85,-0.98,0.06,2.27,1.04,0,">1 nonsynonymous","N64S A81E Y178S",3
"lib2","SARS-CoV-2","GGCCAGTAAATCACTA",4,55.08,10.32,-0.51,0.06,2.74,1.06,0,">1 nonsynonymous","S36V E135S",2
"lib2","SARS-CoV-2","GGCCAGTAGAAATGAA",1,37.81,9.95,-0.88,0.11,2.74,1.04,0.01,">1 nonsynonymous","C6A D59C",2
"lib2","SARS-CoV-2","GGCCAGTCTGCTCAGC",2,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y K56N N64D W106L N118Y P149M",6
"lib2","SARS-CoV-2","GGCCAGTGCCTTTAAG",3,122.8,10.45,-0.39,0.05,2.84,1.07,0,">1 nonsynonymous","K26V Y39R V65M D98R",4
"lib2","SARS-CoV-2","GGCCAGTTTGTTAATC",5,63.56,10.18,-0.66,0.08,2.53,1.03,0,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","GGCCATAAACAACCCA",5,21,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L122W R127P Y143D E186M T201K",5
"lib2","SARS-CoV-2","GGCCATAAACTACATT",2,86.12,10.16,-0.68,0.06,2.74,1.01,0,"1 nonsynonymous","F99M",1
"lib2","SARS-CoV-2","GGCCATAATTTCTATA",3,10.94,6,-4.84,2,3,1.06,0,">1 nonsynonymous","L57G D90N T100P",3
"lib2","SARS-CoV-2","GGCCATACCCCACATT",1,10.27,10.81,-0.02,0.09,3,1.05,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","GGCCATAGATGTAATC",4,7.49,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","P96S R127G P133M",3
"lib2","SARS-CoV-2","GGCCATAGATTGACAG",3,47.78,10.36,-0.48,0.07,2.85,1.03,0,"1 nonsynonymous","E186F",1
"lib2","SARS-CoV-2","GGCCATAGTGCAACAT",2,28.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38A D97I R127Q R136L V173N",5
"lib2","SARS-CoV-2","GGCCATATAACCTTTG",1,56.4,10.21,-0.62,0.04,2.83,1.04,0,">1 nonsynonymous","I2K N30T A42F S129V",4
"lib2","SARS-CoV-2","GGCCATATATCCCCAT",3,36.8,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S36F K94W",2
"lib2","SARS-CoV-2","GGCCATATCCCCTACT",10,69.59,9.91,-0.93,0.06,2.05,1.03,0,">1 nonsynonymous","L60F P82V",2
"lib2","SARS-CoV-2","GGCCATCAACCGGACG",5,27.12,8.01,-2.82,0.44,1.5,1.06,0.07,">1 nonsynonymous","D34H P82L V115H V153I",4
"lib2","SARS-CoV-2","GGCCATCAACGCACCA",17,3.09,NA,NA,NA,NA,NA,NA,"stop","P54C S113*",2
"lib2","SARS-CoV-2","GGCCATCATCCGGGAC",3,48.33,10.18,-0.65,0.11,2.74,1.06,0,">1 nonsynonymous","F44L K56L N120S",3
"lib2","SARS-CoV-2","GGCCATCTTGCCCAGA",1,70.03,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10V V32R C49S",3
"lib2","SARS-CoV-2","GGCCATGAAAGAAATC",1,11.56,9.01,-1.83,0.09,2.93,1.13,0,"1 nonsynonymous","G146K",1
"lib2","SARS-CoV-2","GGCCATGAAATTGGTA",6,46.64,8.76,-2.08,0.22,1.54,1.1,0.02,">1 nonsynonymous","S41L P96T Q163N",3
"lib2","SARS-CoV-2","GGCCATGAACATTAAC",7,185.74,10.76,-0.08,0.03,2.91,1.1,0,">1 nonsynonymous","A22N T140R",2
"lib2","SARS-CoV-2","GGCCATGACGTAACAT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81H L122D D137S N157L",4
"lib2","SARS-CoV-2","GGCCATGATCGCCATG",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T V65D Q176R K199N",4
"lib2","SARS-CoV-2","GGCCATGATTGTATAT",1,8.95,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","W23K V32W W106K",3
"lib2","SARS-CoV-2","GGCCATGTAACCCAGT",9,140.23,10.71,-0.13,0.06,2.83,1.14,0,">1 nonsynonymous","Y39V T85K",2
"lib2","SARS-CoV-2","GGCCATTGATGTACCC",6,39.11,10.45,-0.39,0.06,2.84,1.14,0,"1 nonsynonymous","S164W",1
"lib2","SARS-CoV-2","GGCCCAAAATTCTCCA",12,256.29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12L V20D G86H F99H Y175S Y178C",6
"lib2","SARS-CoV-2","GGCCCAAATTTTGTGT",14,241.15,10.52,-0.31,0.04,2.93,1.05,0,"1 nonsynonymous","G116Y",1
"lib2","SARS-CoV-2","GGCCCAACCATCTTAC",1,48.67,10.63,-0.21,0.04,2.9,1.12,0,">1 nonsynonymous","L122V P133A F160Q",3
"lib2","SARS-CoV-2","GGCCCAACTAGTAGAT",4,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L P96T Y119N P149Q",4
"lib2","SARS-CoV-2","GGCCCAAGCAATCTAG",3,1.44,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","GGCCCAATAATGAGTC",4,38.53,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G101C Q168G",2
"lib2","SARS-CoV-2","GGCCCAATAGAAATGG",13,4.17,NA,NA,NA,NA,NA,NA,"stop","A33P D59G F70* N109W E141W",5
"lib2","SARS-CoV-2","GGCCCAATCTATGCAT",4,32.95,9.47,-1.37,0.12,2.1,1.06,0.01,">1 nonsynonymous","N24D F99L E154C",3
"lib2","SARS-CoV-2","GGCCCACACACTATAT",4,77.45,9.61,-1.22,0.33,1.5,1,0.06,">1 nonsynonymous","S41A G51S P96S T100I K114W P149Q",6
"lib2","SARS-CoV-2","GGCCCACGAACCCACT",14,97.51,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y93S R124T K128S",3
"lib2","SARS-CoV-2","GGCCCACGATACTCTA",14,257.67,10.81,-0.03,0.05,2.88,1.06,0,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","GGCCCAGGTCTACTGA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P54* N120S T170L",3
"lib2","SARS-CoV-2","GGCCCATAAACAGTTG",1,9.04,10.7,-0.14,0.11,3,1.06,0,">1 nonsynonymous","I2N D59R",2
"lib2","SARS-CoV-2","GGCCCATAAGTTTAGT",4,58.6,9.9,-0.94,0.09,2.5,1.03,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","GGCCCATACATACCCG",9,99.36,10.89,0.06,0.05,2.98,1.02,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","GGCCCATTTTTCTAAT",3,26.64,6,-4.84,1.37,1.5,1.14,0.02,">1 nonsynonymous","S19R G86H L125M",3
"lib2","SARS-CoV-2","GGCCCCAAAATGGAAA",3,36.47,10.31,-0.53,0.1,2.8,1.06,0,"1 nonsynonymous","G174R",1
"lib2","SARS-CoV-2","GGCCCCAAAGGTCTCG",2,0.14,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGCCCCAACGAGTTAA",2,13.42,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","N13C G86F P197T",3
"lib2","SARS-CoV-2","GGCCCCAATTACGCCT",8,159.08,10.86,0.03,0.04,2.97,1.05,0,"1 nonsynonymous","S200R",1
"lib2","SARS-CoV-2","GGCCCCACAAAAGCAA",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62P C102T E141S",3
"lib2","SARS-CoV-2","GGCCCCACGCATGTTA",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G L122F",2
"lib2","SARS-CoV-2","GGCCCCAGCTAAACAT",9,43.39,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S19K K26M A89F S113P Y119A L162W",6
"lib2","SARS-CoV-2","GGCCCCATGGAATCCT",7,158.51,10.91,0.07,0.05,2.98,1.05,0,"1 nonsynonymous","K26T",1
"lib2","SARS-CoV-2","GGCCCCCCGTCCAACT",1,45.82,10.78,-0.05,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCCCGACATAGTCA",5,69.51,9.65,-1.19,0.07,1.89,1.12,0,">1 nonsynonymous","S41L D59G A105I",3
"lib2","SARS-CoV-2","GGCCCCGTTACCAAAT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F P54A",2
"lib2","SARS-CoV-2","GGCCCCGTTGAGCCCG",2,16.76,10.87,0.03,0.1,2.93,1.09,0,"1 nonsynonymous","Q144G",1
"lib2","SARS-CoV-2","GGCCCGAACAAGTCGA",3,92.1,10.27,-0.56,0.05,2.82,1.09,0,">1 nonsynonymous","N107G S200L",2
"lib2","SARS-CoV-2","GGCCCGAATTTATTGG",4,12.71,8.02,-2.81,0.41,1.5,1.04,0.06,">1 nonsynonymous","N13H V20S P149K",3
"lib2","SARS-CoV-2","GGCCCGCATGCTTACA",2,1.83,NA,NA,NA,NA,NA,NA,"stop","T3R Y39V A67V L95*",4
"lib2","SARS-CoV-2","GGCCCGCCATAGGCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","L60S N92S A105V K198*",4
"lib2","SARS-CoV-2","GGCCCGGATAATAGTG",12,67.42,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y50L F167A",2
"lib2","SARS-CoV-2","GGCCCGGCTTACACAA",5,37.66,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F126N Q144N V181A",3
"lib2","SARS-CoV-2","GGCCCGGGTTGGCATG",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S G83T F99L R124E G166I S184T",6
"lib2","SARS-CoV-2","GGCCCGGTTTTAAGAT",5,135.29,9.33,-1.5,0.05,2.87,1.08,0,"1 nonsynonymous","Q168C",1
"lib2","SARS-CoV-2","GGCCCGTCTCAACCTT",3,73.71,10.87,0.04,0.06,2.89,1.07,0,"1 nonsynonymous","L111I",1
"lib2","SARS-CoV-2","GGCCCTACCACTTTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15G V52N F156A G174C",4
"lib2","SARS-CoV-2","GGCCCTATAGACGACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G S129V",2
"lib2","SARS-CoV-2","GGCCCTATGCTCTCAA",1,54.91,10.73,-0.11,0.03,2.98,1.02,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","GGCCCTCAACCGGGTT",1,0.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16A K128G Y143Q G196S",4
"lib2","SARS-CoV-2","GGCCCTCAGCGTATGA",2,7.27,7.09,-3.75,0.32,1.5,1,0.02,">1 nonsynonymous","R25L K114Y P197M",3
"lib2","SARS-CoV-2","GGCCCTCCAAAGACCA",4,1.3,NA,NA,NA,NA,NA,NA,"stop","T46M S139C C195*",3
"lib2","SARS-CoV-2","GGCCCTCCAGACAATC",3,6.25,10.78,-0.05,0.06,3,1.03,0,"1 nonsynonymous","N30P",1
"lib2","SARS-CoV-2","GGCCCTCGTAAAAGGT",1,64,9.99,-0.85,0.05,2.87,1.07,0,">1 nonsynonymous","V37S G155V P191S",3
"lib2","SARS-CoV-2","GGCCGAACAACAAATG",2,45.24,8.65,-2.19,0.08,2.77,1.12,0,">1 nonsynonymous","Y121A S164L P197I",3
"lib2","SARS-CoV-2","GGCCGAATCTATCTCG",8,2.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GGCCGACAAGTCACCA",4,24.43,9.53,-1.31,0.14,2.33,1.15,0.01,">1 nonsynonymous","V65L I104G",2
"lib2","SARS-CoV-2","GGCCGACGGGATCTAA",19,13.31,10.7,-0.13,0.25,2.62,1,0.02,">1 nonsynonymous","A22M D59G K128E",3
"lib2","SARS-CoV-2","GGCCGAGAGCAAACTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","L60D P96* P133* S147W",4
"lib2","SARS-CoV-2","GGCCGAGCAATAAGAG",2,24.61,10.75,-0.09,0.05,3,1.02,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","GGCCGAGGATAACAGT",11,187.85,10.8,-0.04,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCGATAATCTACTA",3,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N V173P Q176R",3
"lib2","SARS-CoV-2","GGCCGATACCCGGATC",2,5.21,6,-4.84,2,1.5,1.03,0.03,">1 nonsynonymous","L5I T63M D112N L131E",4
"lib2","SARS-CoV-2","GGCCGATGTATCTTGG",7,68.03,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","E135N G146I F156S",3
"lib2","SARS-CoV-2","GGCCGATGTTGTAAGG",2,13.01,9.4,-1.44,0.07,1.95,1.01,0,">1 nonsynonymous","L57Y Y66V K94H E186S",4
"lib2","SARS-CoV-2","GGCCGCAAAACGAACT",5,69.76,10.56,-0.28,0.04,2.94,1.04,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","GGCCGCACAGCCTAAA",4,76.34,10.08,-0.76,0.07,2.71,1.06,0,">1 nonsynonymous","L5H Y35N L122T P149S",4
"lib2","SARS-CoV-2","GGCCGCAGATTTAGTT",3,79.48,10.76,-0.08,0.03,2.97,1.05,0,">1 nonsynonymous","N4S F62L",2
"lib2","SARS-CoV-2","GGCCGCCATCGCCTAT",6,32.5,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S19E T55L R136D",3
"lib2","SARS-CoV-2","GGCCGCCCTTTCTTTA",3,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90V D98F",2
"lib2","SARS-CoV-2","GGCCGGAAAACCTTAT",5,292.73,9.96,-0.87,0.05,2.92,1.06,0,"1 nonsynonymous","K114G",1
"lib2","SARS-CoV-2","GGCCGGCGACAAAATA",3,0.47,NA,NA,NA,NA,NA,NA,"stop","S45L G51* A89W D112P",4
"lib2","SARS-CoV-2","GGCCGGTATAGCATGA",3,65.63,10.77,-0.07,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCGTATGATTCCAC",9,107.92,10.88,0.04,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCGTCGAAATAACG",1,21.16,9.1,-1.73,0.23,1.72,1.23,0.02,">1 nonsynonymous","V11R N58S",2
"lib2","SARS-CoV-2","GGCCGTGCGGTTATTT",12,47.11,8.31,-2.53,0.17,1.88,1.12,0.01,">1 nonsynonymous","N64S A81S K132D G146Q",4
"lib2","SARS-CoV-2","GGCCGTTAGAACAGGT",6,39.04,6.03,-4.81,1.86,1.5,1.28,0.04,">1 nonsynonymous","G101N V115L",2
"lib2","SARS-CoV-2","GGCCTAACTAACCAGC",1,35.11,6,-4.84,2,2.84,1.13,0,">1 nonsynonymous","E10K V65E Q168I",3
"lib2","SARS-CoV-2","GGCCTAAGTATTAAAA",11,3.4,NA,NA,NA,NA,NA,NA,"stop","T3V K87*",2
"lib2","SARS-CoV-2","GGCCTAAGTTTGATTT",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N S29G T201H",3
"lib2","SARS-CoV-2","GGCCTAATTCTCTTCT",3,61.96,8.9,-1.93,0.09,2.67,1.14,0,">1 nonsynonymous","G146R G152S",2
"lib2","SARS-CoV-2","GGCCTACCAACGTCCT",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T F44C G86A Y93T V103I A145T",6
"lib2","SARS-CoV-2","GGCCTACCAGATAGCA",11,97.53,10.73,-0.11,0.05,2.94,1.07,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","GGCCTAGATAACCGCG",6,0.72,NA,NA,NA,NA,NA,NA,"stop","L5C R127L G146A E186*",4
"lib2","SARS-CoV-2","GGCCTAGATTCAGCAG",6,87.5,9.87,-0.97,0.06,2.15,1.1,0,">1 nonsynonymous","V37R P96C",2
"lib2","SARS-CoV-2","GGCCTAGCCCAGATGC",3,40.58,10.8,-0.03,0.07,2.92,1.11,0,"1 nonsynonymous","I2G",1
"lib2","SARS-CoV-2","GGCCTATACAGTTTAC",10,147.79,9.4,-1.43,0.06,2.12,1.04,0,">1 nonsynonymous","G83F N107S G152S",3
"lib2","SARS-CoV-2","GGCCTATATTTAAATC",13,149.88,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A14C D59F R73L G83V",4
"lib2","SARS-CoV-2","GGCCTATGGATAACCC",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L Y121R C150F T201R",4
"lib2","SARS-CoV-2","GGCCTCAAACTCATCC",9,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56V N109L G117D Y165D",4
"lib2","SARS-CoV-2","GGCCTCACATTATAAG",1,10.02,9.8,-1.04,0.18,2.38,1.25,0.01,">1 nonsynonymous","I28W C61L I88T V173L",4
"lib2","SARS-CoV-2","GGCCTCCAGATTCATA",1,32.9,10.43,-0.41,0.09,2.79,1.14,0,">1 nonsynonymous","A42R Y66K",2
"lib2","SARS-CoV-2","GGCCTCGGATCAAGAG",4,31.8,10.96,0.13,0.06,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GGCCTCTAGCGAGTAT",2,24.17,10.2,-0.64,0.07,2.92,1.05,0,"1 nonsynonymous","Y35N",1
"lib2","SARS-CoV-2","GGCCTCTGCCTATGTA",3,71.19,7.33,-3.5,0.19,1.5,1.17,0.01,">1 nonsynonymous","V32L R73A Y121A E154N",4
"lib2","SARS-CoV-2","GGCCTGAACATAAAAG",10,5.69,NA,NA,NA,NA,NA,NA,"stop","P149* T170C",2
"lib2","SARS-CoV-2","GGCCTGACCTTTCATA",2,30.68,10.41,-0.43,0.09,2.77,1.03,0,">1 nonsynonymous","N13G A42Y H189L",3
"lib2","SARS-CoV-2","GGCCTGATGATATGAT",2,41.49,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S19G S45P D68W P82S A89T T170D",6
"lib2","SARS-CoV-2","GGCCTGCCACGGTTCG",1,14.76,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S108Y G116Y C158E K198L",4
"lib2","SARS-CoV-2","GGCCTGCCACGTTACT",7,47.97,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","S29M C49S P54N A81F T100S",5
"lib2","SARS-CoV-2","GGCCTGCTACGCTGTG",5,50.11,10.23,-0.61,0.08,2.79,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCTGCTCCTACTTT",6,116.44,7.29,-3.55,0.11,2.21,1.11,0,">1 nonsynonymous","I142M C158H",2
"lib2","SARS-CoV-2","GGCCTGGAGTAAATAA",3,32.27,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","G101F G174N",2
"lib2","SARS-CoV-2","GGCCTGGATTTCTATG",10,237.38,9.15,-1.69,0.07,1.89,1.06,0,">1 nonsynonymous","N13L S36K Y66T G116A A190M",5
"lib2","SARS-CoV-2","GGCCTGGCCTTCATTC",2,30.44,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9L I72G N107C R136S",4
"lib2","SARS-CoV-2","GGCCTGGGTAGCCAAA",4,0.92,NA,NA,NA,NA,NA,NA,"stop","D97* T148S",2
"lib2","SARS-CoV-2","GGCCTGTAAAAATAGG",9,43.68,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68V W106A S113L",3
"lib2","SARS-CoV-2","GGCCTGTCGACATCCT",8,204.66,10.71,-0.12,0.04,2.94,1.07,0,"1 nonsynonymous","T63H",1
"lib2","SARS-CoV-2","GGCCTGTTGACGATTG",8,15.18,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A14L G83D A89S I104G S184D",5
"lib2","SARS-CoV-2","GGCCTTAAGATACGAC",2,28.84,8.2,-2.63,0.14,2.28,1.1,0.01,">1 nonsynonymous","F126K N157S",2
"lib2","SARS-CoV-2","GGCCTTAAGGCCCTAT",2,4.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4W K56T D98L",3
"lib2","SARS-CoV-2","GGCCTTAAGTCCGATA",4,0.1,NA,NA,NA,NA,NA,NA,"stop","A33S P82N D97F V103E Q144*",5
"lib2","SARS-CoV-2","GGCCTTAGAGACAACA",4,27.53,7.16,-3.68,0.19,1.98,1.21,0.01,">1 nonsynonymous","K87V C150A",2
"lib2","SARS-CoV-2","GGCCTTCAAAAAAAAA",6,127.99,10.79,-0.04,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCCTTCAGTACTTAA",7,2.11,NA,NA,NA,NA,NA,NA,"stop","R27K N118*",2
"lib2","SARS-CoV-2","GGCCTTCTCCCGATTG",9,71.32,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V37Y A89R G101P",3
"lib2","SARS-CoV-2","GGCCTTGAGTTAGACC",7,26.19,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","G9Q V103G",2
"lib2","SARS-CoV-2","GGCCTTTACCTTATCA",4,19.01,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","T55F L95Q N107F",3
"lib2","SARS-CoV-2","GGCGAAAAAATCCCGT",5,32.82,6.25,-4.59,0.86,1.5,1.2,0.02,">1 nonsynonymous","A33T G74T G166H",3
"lib2","SARS-CoV-2","GGCGAAAATAACATGT",2,20.32,10.26,-0.58,0.07,2.81,1.16,0.01,"1 nonsynonymous","K48Y",1
"lib2","SARS-CoV-2","GGCGAAACAAAATTAA",3,27.16,10.6,-0.23,0.07,2.92,1.08,0,">1 nonsynonymous","I2T V115M S147F",3
"lib2","SARS-CoV-2","GGCGAAAGACTAAGGC",5,109.85,10.23,-0.61,0.04,2.81,1.04,0,">1 nonsynonymous","Y39G S45K",2
"lib2","SARS-CoV-2","GGCGAAAGTATCCCCG",10,52.69,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V65F G101T S108L",3
"lib2","SARS-CoV-2","GGCGAAATACCAGACT",10,52.72,10.26,-0.58,0.06,2.76,1,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","GGCGAACGCTTCCATA",9,75.63,10.84,0.01,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGAACTCGATTTAT",2,41.12,10.7,-0.13,0.03,2.96,1.06,0,">1 nonsynonymous","S36A S53N S184K",3
"lib2","SARS-CoV-2","GGCGAAGAAAAATGTG",6,1.88,NA,NA,NA,NA,NA,NA,"stop","A33I N40L T46L L188*",4
"lib2","SARS-CoV-2","GGCGAAGATTCCTCTT",7,27.84,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T3C I28T C61G Y119V",4
"lib2","SARS-CoV-2","GGCGAAGCGACACACT",7,0.84,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","GGCGAAGCGTCCAGGG",2,1.08,NA,NA,NA,NA,NA,NA,"stop","W23T D68*",2
"lib2","SARS-CoV-2","GGCGAAGGCAACTTAC",4,67.07,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","G117K P161I P197K",3
"lib2","SARS-CoV-2","GGCGAATATATAAATT",2,17.19,10.9,0.06,0.07,2.97,1.05,0,"1 nonsynonymous","E154T",1
"lib2","SARS-CoV-2","GGCGAATATATAATCG",2,0.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128A P161M",2
"lib2","SARS-CoV-2","GGCGAATTCCAAGTAA",15,177.83,10.76,-0.08,0.06,2.9,1.12,0,"1 nonsynonymous","T63D",1
"lib2","SARS-CoV-2","GGCGACAAAGCCATGC",4,13.3,6.76,-4.08,0.16,1.99,1.05,0.01,">1 nonsynonymous","V32T A89I P96W G172D T201K",5
"lib2","SARS-CoV-2","GGCGACAATAGAACAA",1,37.97,8.56,-2.28,0.08,2.47,1.05,0,">1 nonsynonymous","N120V Y143T",2
"lib2","SARS-CoV-2","GGCGACAATGTTGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7* Y39D L60N",3
"lib2","SARS-CoV-2","GGCGACACTAGATACA",3,43.75,9.64,-1.2,0.04,2.96,1.06,0,"1 nonsynonymous","T170R",1
"lib2","SARS-CoV-2","GGCGACAGTGAAAGAT",11,5.48,NA,NA,NA,NA,NA,NA,"stop","N4D E76I T100* N109R N120R",5
"lib2","SARS-CoV-2","GGCGACCGGGTCAAAT",4,8.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S45L G51S E154V",4
"lib2","SARS-CoV-2","GGCGACGATCTGCGAC",12,30.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15H P82G",2
"lib2","SARS-CoV-2","GGCGACGATTCTAACA",3,54.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1H V11G A145K G172E",4
"lib2","SARS-CoV-2","GGCGACGTCGATTATA",4,11.87,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F8M V20C N64R D90Q G155K Q168S",6
"lib2","SARS-CoV-2","GGCGACTATAGAATGC",1,29.31,10.23,-0.6,0.06,2.84,1.07,0,">1 nonsynonymous","C6N S41T",2
"lib2","SARS-CoV-2","GGCGACTCCGCGCCAC",10,1.18,NA,NA,NA,NA,NA,NA,"stop","C61* V103L R127W Y178S",4
"lib2","SARS-CoV-2","GGCGACTTGGATGAAA",1,40.77,10.91,0.07,0.07,3,1.01,0,">1 nonsynonymous","T15S S43Y K128P",3
"lib2","SARS-CoV-2","GGCGAGAAACTGGACT",4,167.6,8.16,-2.67,0.16,1.93,1.05,0.01,">1 nonsynonymous","P7L N157L",2
"lib2","SARS-CoV-2","GGCGAGAATCTAAGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","G51* L95H",2
"lib2","SARS-CoV-2","GGCGAGACGTATAGAC",4,194.15,10.66,-0.17,0.02,2.96,1.06,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","GGCGAGAGACACAGCT",3,31.39,10.82,-0.01,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGAGCCAACTTGTG",12,108.52,10.7,-0.14,0.03,2.9,1.1,0,">1 nonsynonymous","K48Q I138R P197R",3
"lib2","SARS-CoV-2","GGCGAGGAATGGCAAC",4,33.57,6,-4.84,2,1.5,1.3,0.03,"1 nonsynonymous","V103N",1
"lib2","SARS-CoV-2","GGCGAGGTGACAAGGT",9,110.66,7.32,-3.52,0.24,1.5,1.06,0.02,">1 nonsynonymous","V32E L38G K132D I138S",4
"lib2","SARS-CoV-2","GGCGAGTACGTTTACG",1,27.66,8.41,-2.42,0.15,2.86,1.03,0.01,">1 nonsynonymous","S36K Y119K F126A",3
"lib2","SARS-CoV-2","GGCGAGTCAACTTACA",3,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L A81K G117R P133R Y143G E186A",6
"lib2","SARS-CoV-2","GGCGAGTTGTACCGCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N F44C I104N N110I",4
"lib2","SARS-CoV-2","GGCGATACCGCACGAA",7,228.2,9.33,-1.51,0.08,2.08,1.05,0,">1 nonsynonymous","N40Y P149S Q176M",3
"lib2","SARS-CoV-2","GGCGATACGGTATGGG",5,78.17,6.09,-4.75,1.13,1.5,1.29,0.03,">1 nonsynonymous","Y50K T100F F134S Y143H",4
"lib2","SARS-CoV-2","GGCGATATAACTAATA",2,20.87,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","V11I G86W K128F P149R",4
"lib2","SARS-CoV-2","GGCGATATACCAAAAT",18,6.42,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","C31Y G74K I88W S113Y",4
"lib2","SARS-CoV-2","GGCGATCATCAATCAT",3,15.21,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","G9C C49Q",2
"lib2","SARS-CoV-2","GGCGATCCCTATATAT",9,25.96,6.61,-4.22,0.38,1.5,1.12,0.02,">1 nonsynonymous","S45I S53G L95T G116L E141L N171M",6
"lib2","SARS-CoV-2","GGCGATCGAGATAGAC",10,174.69,10.76,-0.07,0.05,2.96,1.02,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","GGCGATGAAGTATAAA",2,51.73,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C49G N120V Y143E F156K F167M",5
"lib2","SARS-CoV-2","GGCGATGTTACTGTTA",2,10.78,8.17,-2.66,0.34,1.5,1.03,0.06,">1 nonsynonymous","S29W F70Y",2
"lib2","SARS-CoV-2","GGCGATTAATTAGTCC",2,5.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116L",1
"lib2","SARS-CoV-2","GGCGATTTGTAGTACT",2,48.09,9.96,-0.88,0.18,1.82,1.06,0.02,">1 nonsynonymous","E135F Y178T",2
"lib2","SARS-CoV-2","GGCGATTTTCGCAGGC",1,6.5,8.54,-2.3,0.21,1.86,1.09,0.03,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","GGCGCAAATGACAACA",6,116.42,10.27,-0.57,0.02,2.95,1.02,0,">1 nonsynonymous","D59P Q84S",2
"lib2","SARS-CoV-2","GGCGCAACGACTAATT",12,64.54,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99G G146N K198C",3
"lib2","SARS-CoV-2","GGCGCAATTAACTGAT",1,69.12,10.15,-0.68,0.07,2.73,1,0,"1 nonsynonymous","S139I",1
"lib2","SARS-CoV-2","GGCGCAATTGAGCACA",3,33.25,10.91,0.08,0.07,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGCACACCATATTT",1,8.38,6.64,-4.19,2,3,1.18,0,">1 nonsynonymous","N1M G51T A81H Y119L C150V T201P",6
"lib2","SARS-CoV-2","GGCGCACCTCTCCGAA",10,61.08,10.79,-0.05,0.07,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGCACCTGAAAGAC",2,61.9,8.92,-1.91,0.08,2.9,1.11,0,">1 nonsynonymous","N58P G166L",2
"lib2","SARS-CoV-2","GGCGCACTGACACGCA",14,48.16,8.71,-2.12,0.15,1.53,1.07,0.01,">1 nonsynonymous","S41I W106V P169F",3
"lib2","SARS-CoV-2","GGCGCAGATGATATTA",3,25.38,7.56,-3.28,0.25,1.5,1.04,0.02,"1 nonsynonymous","D112G",1
"lib2","SARS-CoV-2","GGCGCAGGCTACTCGT",3,9.9,7.03,-3.81,0.57,1.5,1,0.04,">1 nonsynonymous","K87V C102V W106R E141Y",4
"lib2","SARS-CoV-2","GGCGCAGTATGAAAGA",13,63.54,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P82E W106T",2
"lib2","SARS-CoV-2","GGCGCATACGTATCAG",3,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61K I80T T140P F160L",4
"lib2","SARS-CoV-2","GGCGCATGCAACTGTA",23,169.96,9.07,-1.77,0.08,2.05,1.1,0,">1 nonsynonymous","S41V P149F G155L",3
"lib2","SARS-CoV-2","GGCGCCAATAGCAAAT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","C61N I88S W106* S129W F167V",5
"lib2","SARS-CoV-2","GGCGCCACATGATAAA",2,51.96,10.43,-0.4,0.07,2.78,1,0,">1 nonsynonymous","T3R A42C L60F",3
"lib2","SARS-CoV-2","GGCGCCACTAACTGGC",1,28.52,10.41,-0.42,0.05,2.99,1.06,0,">1 nonsynonymous","S29G S41L S200K",3
"lib2","SARS-CoV-2","GGCGCCGCGTCGTCCC",8,85.19,8.61,-2.22,0.2,1.5,1.07,0.02,">1 nonsynonymous","K56A K114T Y123T F185V",4
"lib2","SARS-CoV-2","GGCGCCTATGCTTAAT",1,39.21,10.42,-0.42,0.06,2.97,1.03,0,">1 nonsynonymous","C61D T85G F99W",3
"lib2","SARS-CoV-2","GGCGCCTATTTGCGGT",2,6.39,6,-4.84,2,3,1.06,0,"1 nonsynonymous","G101Q",1
"lib2","SARS-CoV-2","GGCGCCTCAATTACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","G86Y L95D W106* N171Y T201Y",5
"lib2","SARS-CoV-2","GGCGCCTTACAAGTAG",2,13.91,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","G86P L125V Y143I V181N",4
"lib2","SARS-CoV-2","GGCGCGACAGGCTGAG",4,0.64,NA,NA,NA,NA,NA,NA,"stop","V11Y G116* P161D",3
"lib2","SARS-CoV-2","GGCGCGTACATACCTG",5,45.95,10.88,0.04,0.07,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGCTAAAACTAAAA",9,145.81,10.76,-0.08,0.04,3,1.02,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","GGCGCTACTGCGAAAC",4,56.65,10.42,-0.42,0.06,2.83,1.05,0,">1 nonsynonymous","R16G S41R",2
"lib2","SARS-CoV-2","GGCGCTAGTGCATGTT",3,56.4,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14G G86F N107Y P177S",4
"lib2","SARS-CoV-2","GGCGCTCTGATCTTGG",2,38.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F70N G86M A105N Y175S",4
"lib2","SARS-CoV-2","GGCGCTTACGGCCTGG",3,38.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18R R124Y",2
"lib2","SARS-CoV-2","GGCGGAAAATAAACTT",5,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19D L111Q Y159S",3
"lib2","SARS-CoV-2","GGCGGAATGTCAATAA",2,9.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F44Y R73M D137V",4
"lib2","SARS-CoV-2","GGCGGACACAATATTT",13,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R V115E K198I",3
"lib2","SARS-CoV-2","GGCGGACCCTACCATT",5,49.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48N L122A",2
"lib2","SARS-CoV-2","GGCGGACCTAGGCGCA",4,73.01,10.66,-0.18,0.04,2.82,1.19,0,"1 nonsynonymous","A42L",1
"lib2","SARS-CoV-2","GGCGGACGTAGCCAAG",13,97.06,6.1,-4.73,0.56,1.5,1.16,0.01,">1 nonsynonymous","P54T K87I K94W",3
"lib2","SARS-CoV-2","GGCGGACTAGAAGTTT",9,87.71,10.94,0.1,0.06,2.93,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GGCGGACTCAGCAAAT",1,24.12,10.83,-0.01,0.07,2.89,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGGATATGTCTAAC",10,214.44,9.45,-1.39,0.08,1.93,1.06,0,">1 nonsynonymous","A89F K198P",2
"lib2","SARS-CoV-2","GGCGGATGGTACATTG",4,8.3,7.93,-2.9,0.24,1.5,1.01,0.02,">1 nonsynonymous","P96K P169E",2
"lib2","SARS-CoV-2","GGCGGATTCCCCCTAG",1,11.49,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F8S S45L K48P P177F T201E",5
"lib2","SARS-CoV-2","GGCGGATTGGCGAGGG",1,29.21,10.68,-0.16,0.12,2.89,1,0.01,">1 nonsynonymous","S53P A67L R78G T148S",4
"lib2","SARS-CoV-2","GGCGGCAAGCTTGTAA",2,30.47,10.36,-0.47,0.05,2.93,1.1,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","GGCGGCATAGAGTGAA",2,38.79,10.75,-0.08,0.05,2.94,1.08,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","GGCGGCGATATACAAG",2,65.08,9.98,-0.85,0.07,2.77,1.1,0,">1 nonsynonymous","Y35V G116F G152D",3
"lib2","SARS-CoV-2","GGCGGCGGATGTTGAA",6,198.13,9.19,-1.65,0.04,2.87,1.08,0,">1 nonsynonymous","Y143M T170S",2
"lib2","SARS-CoV-2","GGCGGGAAACAAAAGT",7,58,10.92,0.09,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGGGAATTTAATTA",11,167.44,10.48,-0.35,0.05,2.91,1.04,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","GGCGGGGAATCGGGAC",7,33.07,6,-4.84,0.97,1.5,1.13,0.02,">1 nonsynonymous","C61R W106T D112A",3
"lib2","SARS-CoV-2","GGCGGGTAAAAAGAGA",7,38.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I28K C49K C61P G86E",4
"lib2","SARS-CoV-2","GGCGGTATACCAATGA",2,36.05,8.15,-2.69,0.15,2.39,1.09,0.01,">1 nonsynonymous","A14L G166W",2
"lib2","SARS-CoV-2","GGCGGTATATGGTTGA",2,56.41,6.81,-4.03,0.41,1.5,1.21,0.03,">1 nonsynonymous","S19V A33L L60Y",3
"lib2","SARS-CoV-2","GGCGGTCCTATAATTG",1,40.49,8.4,-2.43,0.11,2.96,1.02,0.01,">1 nonsynonymous","D97H Y119S N151T G174K",4
"lib2","SARS-CoV-2","GGCGTAAACACTCCTA",6,18.6,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60V V103S V181A",3
"lib2","SARS-CoV-2","GGCGTACCACAGCAAC",4,43.89,9.6,-1.24,0.13,1.93,1.08,0.01,">1 nonsynonymous","L5I F12N V37K C61A K198R",5
"lib2","SARS-CoV-2","GGCGTACCGTGTGCTG",1,47.82,10.89,0.05,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGTAGACAGCACTT",5,153.51,9.89,-0.94,0.09,2.14,1.11,0,">1 nonsynonymous","P7T S45M N58V",3
"lib2","SARS-CoV-2","GGCGTAGACCTTCAAC",6,87.2,9.16,-1.68,0.05,2.93,1.08,0,">1 nonsynonymous","S41G Y119G",2
"lib2","SARS-CoV-2","GGCGTAGCTTAGAAAA",7,60.21,6,-4.84,1.3,1.5,1.11,0.01,">1 nonsynonymous","S19Y F47R F62M R179G",4
"lib2","SARS-CoV-2","GGCGTATAATAAACAA",5,6.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L T85M K87L F99K Y121N T201R",6
"lib2","SARS-CoV-2","GGCGTATCCGATAGTG",9,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T L122K",2
"lib2","SARS-CoV-2","GGCGTATGGCCCAAAA",2,14.6,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F17M L57V C102W Y119D",4
"lib2","SARS-CoV-2","GGCGTATTTTGGTAAA",3,39.58,10.54,-0.3,0.06,2.99,1,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","GGCGTCAAAAACCCAT",1,16.57,8.9,-1.94,0.15,1.68,1.06,0.01,">1 nonsynonymous","D68T A192M S200G",3
"lib2","SARS-CoV-2","GGCGTCAAAGCACACT",4,35.3,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G9L Y66K T85D I88G I104L E141W",6
"lib2","SARS-CoV-2","GGCGTCACTCCTTGAT",4,69.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A G86E",2
"lib2","SARS-CoV-2","GGCGTCAGACAGTCCT",10,366.13,9.1,-1.74,0.04,2.78,1.1,0,">1 nonsynonymous","A14S F47M C61K L125C",4
"lib2","SARS-CoV-2","GGCGTCAGAGAAATCC",2,2.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93T I104S P149E T201K",4
"lib2","SARS-CoV-2","GGCGTCATTGACTGAT",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94S P149R",2
"lib2","SARS-CoV-2","GGCGTCCTCGGGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* P133L T201G",3
"lib2","SARS-CoV-2","GGCGTCCTTACCGCAG",3,22.03,10.85,0.01,0.1,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCGTCGCTGATAGCT",5,130.39,7.25,-3.58,0.08,2.38,1.11,0,">1 nonsynonymous","G9S C158E",2
"lib2","SARS-CoV-2","GGCGTCTATGTAAACC",2,32.91,10.74,-0.1,0.04,2.94,1.05,0,">1 nonsynonymous","A18G F160N",2
"lib2","SARS-CoV-2","GGCGTGAATAAGCAAT",11,98.75,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D90I I142G",2
"lib2","SARS-CoV-2","GGCGTGCGATTACATT",3,131.17,6,-4.84,1.67,3,1.17,0,">1 nonsynonymous","F62A Y119S E135L Q176K",4
"lib2","SARS-CoV-2","GGCGTTAAGCTTAGCA",1,43.42,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S36P D97M E135P C150H",4
"lib2","SARS-CoV-2","GGCGTTACTAGTTCAC",1,42.3,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R73Q N107L Y143R S184H",4
"lib2","SARS-CoV-2","GGCGTTGAGCAATAAA",3,31.45,10.49,-0.35,0.09,2.83,1.16,0,">1 nonsynonymous","N40M V173D",2
"lib2","SARS-CoV-2","GGCGTTGATCCCTTCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19F F47Y T55L Q144C T193N",5
"lib2","SARS-CoV-2","GGCGTTTAAAAACTAA",5,43.93,8.24,-2.59,0.12,2.22,1.11,0.01,">1 nonsynonymous","C61A N107H V153M Q163R",4
"lib2","SARS-CoV-2","GGCGTTTAAGACCACC",2,26.61,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D90E K132L E141P A145W",4
"lib2","SARS-CoV-2","GGCGTTTCATTATCGC",6,64.71,6.62,-4.22,0.36,1.5,1.2,0.01,">1 nonsynonymous","T15K S53A W106R Y119F F156V",5
"lib2","SARS-CoV-2","GGCGTTTGGCAATCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","D98S S200*",2
"lib2","SARS-CoV-2","GGCTAAAAAACTTATC",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I S164W F185L",3
"lib2","SARS-CoV-2","GGCTAAAAAATTACAA",6,53.93,6,-4.84,1.71,1.5,1.2,0.03,">1 nonsynonymous","A14D F17L I28S E135H",4
"lib2","SARS-CoV-2","GGCTAAAACCTAATCT",1,18.14,10.27,-0.56,0.06,3,1.04,0,">1 nonsynonymous","C61G K87P D97R",3
"lib2","SARS-CoV-2","GGCTAAAATTCCAGCA",11,40.2,9.65,-1.19,0.05,2.03,1.01,0,">1 nonsynonymous","F12E V173L",2
"lib2","SARS-CoV-2","GGCTAAAGAAACCTTG",2,0.6,NA,NA,NA,NA,NA,NA,"stop","G9* A105V V115I G152S E186R",5
"lib2","SARS-CoV-2","GGCTAAAGCGGTACCA",14,147.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Q84N K94F C150L",3
"lib2","SARS-CoV-2","GGCTAAATTGTCGGAT",4,34.9,6.02,-4.82,1.58,1.5,1.4,0.06,">1 nonsynonymous","W106E I138W",2
"lib2","SARS-CoV-2","GGCTAACAATGGCCGA",3,159.05,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6G Y39W G51I N64S L131K G166K P177S",7
"lib2","SARS-CoV-2","GGCTAACACTTCACTA",2,64.07,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F44G K56H D98V G117D E141N N151S",6
"lib2","SARS-CoV-2","GGCTAACTCGCAACCC",1,12.91,9.04,-1.8,0.14,2.01,1.07,0.01,">1 nonsynonymous","S36P A105V",2
"lib2","SARS-CoV-2","GGCTAACTTCTCATAC",1,83.83,9.27,-1.57,0.04,2.82,1.08,0,"1 nonsynonymous","R73L",1
"lib2","SARS-CoV-2","GGCTAACTTTTAGTAA",1,12.76,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","D59A I88M A105C I142L",4
"lib2","SARS-CoV-2","GGCTAAGTGTAATAGA",1,8,6,-4.84,1.08,1.5,1.01,0,">1 nonsynonymous","V103G A190V",2
"lib2","SARS-CoV-2","GGCTAAGTTGACTAAT",4,108.06,10.81,-0.03,0.04,2.96,1.06,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","GGCTAAGTTTTGTTAG",4,68.79,10.33,-0.51,0.04,2.81,1.03,0,">1 nonsynonymous","T15S A89T T148F",3
"lib2","SARS-CoV-2","GGCTAATAAATTCAAT",22,322.78,10.85,0.02,0.04,2.94,1.07,0,">1 nonsynonymous","F8W S43Y",2
"lib2","SARS-CoV-2","GGCTAATACAAGTAAG",2,19.72,10.81,-0.02,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTAATCAAAATAAA",2,26.73,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","T55I Y93S K128E Y165K",4
"lib2","SARS-CoV-2","GGCTAATCTACAACAT",4,74.36,10.75,-0.09,0.04,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTACAAAGCAAGTG",1,11.49,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S41A D90P S129A",3
"lib2","SARS-CoV-2","GGCTACACATATGGTC",11,80.94,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V20N K87Y P96K W106P F160C",5
"lib2","SARS-CoV-2","GGCTACACGTTTAAAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","R27W T100* Q168S",3
"lib2","SARS-CoV-2","GGCTACATGGCACCCC",5,146.4,10.49,-0.34,0.04,2.85,1.06,0,">1 nonsynonymous","N4C A42L Y66I",3
"lib2","SARS-CoV-2","GGCTACCATAGTCGTT",3,54.96,6.34,-4.49,0.64,1.5,1.23,0.03,">1 nonsynonymous","E10G V37P D59M T63N Y123L S147F A192T",7
"lib2","SARS-CoV-2","GGCTACCCATTTCCAA",5,164.56,6.59,-4.24,0.29,1.5,1.18,0.01,">1 nonsynonymous","E141C V153Y P161D",3
"lib2","SARS-CoV-2","GGCTACCGAACCATAG",3,55.21,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C6I R73A G83F A105W V153K P161V",6
"lib2","SARS-CoV-2","GGCTACCGCCATACTT",2,0,NA,NA,NA,NA,NA,NA,"stop","A81E N107I K132* Q176H",4
"lib2","SARS-CoV-2","GGCTACGACATCAACC",2,12.42,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","C6F W106N I138F P149L",4
"lib2","SARS-CoV-2","GGCTACGAGAAACGAA",2,29.5,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","R25G C49A",2
"lib2","SARS-CoV-2","GGCTACGGTGAGAGTT",8,42.95,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L57E Q84K S113T Y121L G172W Y178R",6
"lib2","SARS-CoV-2","GGCTACTACTCGCTTG",5,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K I72M I142S E186L",4
"lib2","SARS-CoV-2","GGCTACTCCCAGACCA",2,11.25,8.25,-2.59,0.27,1.53,1.31,0.04,">1 nonsynonymous","V32Q G86Q",2
"lib2","SARS-CoV-2","GGCTACTTAGTTTGAA",23,217.69,9.52,-1.32,0.07,2.05,1.07,0,">1 nonsynonymous","C6L F17Y",2
"lib2","SARS-CoV-2","GGCTACTTCCTTATGT",4,70.69,10.3,-0.54,0.04,2.96,1.06,0,"1 nonsynonymous","G174F",1
"lib2","SARS-CoV-2","GGCTAGACATAGATAA",2,29.76,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R16D S108R S139P",3
"lib2","SARS-CoV-2","GGCTAGACTATACCGC",21,116.64,9.05,-1.79,0.12,1.5,1.11,0.01,"1 nonsynonymous","V20G",1
"lib2","SARS-CoV-2","GGCTAGAGGTATTAAG",18,211.02,10.75,-0.09,0.05,2.87,1.13,0,">1 nonsynonymous","T148G K198T",2
"lib2","SARS-CoV-2","GGCTAGATAATATAGA",4,33.12,10.82,-0.02,0.06,2.98,1.03,0,"1 nonsynonymous","T100R",1
"lib2","SARS-CoV-2","GGCTAGCTAAATCCAT",15,261.52,10.8,-0.03,0.03,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTAGGACACTCATA",2,0,NA,NA,NA,NA,NA,NA,"stop","E10R S43T N92* G116T",4
"lib2","SARS-CoV-2","GGCTAGGTAGAGGCAC",3,3.45,NA,NA,NA,NA,NA,NA,"stop","V37* N151Y K198Q",3
"lib2","SARS-CoV-2","GGCTAGTACCTATAAG",3,20.76,9.48,-1.35,0.06,2.93,1.08,0,">1 nonsynonymous","I2V P169C",2
"lib2","SARS-CoV-2","GGCTAGTTTACGGCGA",3,15.7,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","C6V Y50I S113L",3
"lib2","SARS-CoV-2","GGCTATAACTCTGGAT",8,0.61,NA,NA,NA,NA,NA,NA,"stop","V11L F12S Y39T F62C R73* N130E V180L",7
"lib2","SARS-CoV-2","GGCTATAAGAGTAGCA",22,85.17,9.74,-1.1,0.06,2.02,1.06,0,">1 nonsynonymous","N13Y D90H",2
"lib2","SARS-CoV-2","GGCTATACCAAGTCCA",5,46.27,10.73,-0.11,0.04,2.84,1.17,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","GGCTATACTAACTTGT",1,0,NA,NA,NA,NA,NA,NA,"stop","G86S V115* Y175I",3
"lib2","SARS-CoV-2","GGCTATACTAGAAATA",6,61.95,10.77,-0.07,0.06,2.84,1.16,0,"1 nonsynonymous","K114A",1
"lib2","SARS-CoV-2","GGCTATCACCTACTAG",11,107.97,10.36,-0.48,0.03,2.88,1.04,0,">1 nonsynonymous","C61T D90T",2
"lib2","SARS-CoV-2","GGCTATCACTGCCCGG",2,14.39,9.07,-1.76,0.13,1.71,1.08,0.01,">1 nonsynonymous","N4A V52R Y66N",3
"lib2","SARS-CoV-2","GGCTATCTAATTTGAT",3,81.12,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I28G Y143L G155M",3
"lib2","SARS-CoV-2","GGCTATCTCGATGGTG",10,156.32,10.39,-0.44,0.03,2.87,1.05,0,">1 nonsynonymous","N1H T140P",2
"lib2","SARS-CoV-2","GGCTATGAACAAGAAC",9,239.94,8.5,-2.34,0.06,2.3,1.11,0,">1 nonsynonymous","N64S K132T Q176S",3
"lib2","SARS-CoV-2","GGCTATGACTATTTCT",2,58.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C31H N157Y",2
"lib2","SARS-CoV-2","GGCTATGCTTGACACG",1,0,NA,NA,NA,NA,NA,NA,"stop","V77* F160S",2
"lib2","SARS-CoV-2","GGCTATGGGTCTAAAA",5,58.59,6.06,-4.78,0.82,1.5,1.19,0.02,">1 nonsynonymous","T46A C150G V153A",3
"lib2","SARS-CoV-2","GGCTATTACATCACTG",4,74.73,10.4,-0.44,0.03,2.96,1.05,0,">1 nonsynonymous","N130F F160Q N171A",3
"lib2","SARS-CoV-2","GGCTATTACGTGTCTA",5,79.72,8.42,-2.42,0.16,2.59,1.08,0.01,">1 nonsynonymous","Y175M E186T",2
"lib2","SARS-CoV-2","GGCTATTAGCCCAACC",2,79.35,9.1,-1.74,0.27,1.5,1.07,0.03,">1 nonsynonymous","F47H S69M",2
"lib2","SARS-CoV-2","GGCTATTCACTTCCCG",1,34.74,10.67,-0.16,0.03,2.9,1.13,0,">1 nonsynonymous","E141A A190S",2
"lib2","SARS-CoV-2","GGCTCAAAAACGTTTG",6,24.22,8.1,-2.73,0.33,1.5,1,0.05,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","GGCTCAACTTCGACCG",9,128.15,10.91,0.07,0.04,2.98,1.03,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","GGCTCAAGACTGTGTC",1,20.09,8.15,-2.69,0.17,1.5,1,0.01,">1 nonsynonymous","D75L F126S Q163T",3
"lib2","SARS-CoV-2","GGCTCAATACATAGCT",6,85.12,10.75,-0.08,0.05,2.92,1.08,0,"1 nonsynonymous","K48D",1
"lib2","SARS-CoV-2","GGCTCAATGGTCACAC",2,5.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77G G146L Y175S V182S",4
"lib2","SARS-CoV-2","GGCTCAATTAAAATAA",2,2.74,NA,NA,NA,NA,NA,NA,"stop","A89S F99I N157*",3
"lib2","SARS-CoV-2","GGCTCAATTAATACCC",9,1.03,NA,NA,NA,NA,NA,NA,"stop","G83* N107D V115H",3
"lib2","SARS-CoV-2","GGCTCACAGTTTAGAG",1,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32Y G166F",2
"lib2","SARS-CoV-2","GGCTCACATTGTATGT",9,22.83,10.86,0.03,0.1,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTCACGTAACTGGG",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101V T140K",2
"lib2","SARS-CoV-2","GGCTCACTTAGATTAG",4,22.17,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y35L F70K T85H P96F V173L",5
"lib2","SARS-CoV-2","GGCTCATAAAAAACGA",23,227.53,9.7,-1.13,0.05,1.91,1.05,0,">1 nonsynonymous","V52P A89C",2
"lib2","SARS-CoV-2","GGCTCATATATATCTA",1,114.78,10.87,0.03,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTCATGAACTAGTG",6,46.06,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","C6T D59I F167L",3
"lib2","SARS-CoV-2","GGCTCATTCGTCTTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3A Y93H V103G A145S N171*",5
"lib2","SARS-CoV-2","GGCTCATTTATAAGCG",7,94.66,10.71,-0.12,0.05,2.83,1.17,0,">1 nonsynonymous","N110E N130C",2
"lib2","SARS-CoV-2","GGCTCCAGTAAGATCA",4,61.26,6,-4.84,1.51,1.5,1.12,0.02,">1 nonsynonymous","L5M S45A N107Y G116N E135M",5
"lib2","SARS-CoV-2","GGCTCCATCAATTAAT",1,0.53,NA,NA,NA,NA,NA,NA,"stop","V37Y Y50* E141W L187I",4
"lib2","SARS-CoV-2","GGCTCCCATATGGAAT",1,8.13,10.94,0.1,0.08,3,1,0,"1 nonsynonymous","T140Q",1
"lib2","SARS-CoV-2","GGCTCCCCATTGTAGA",3,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L F44I T63Y Q84V D112H",5
"lib2","SARS-CoV-2","GGCTCCGACGTAGTCA",1,49.47,9.83,-1,0.07,2.79,1.13,0,">1 nonsynonymous","G146A P169N",2
"lib2","SARS-CoV-2","GGCTCCGTACACCCCG",6,141.34,10.9,0.06,0.07,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTCCTACATACAGC",5,63.19,9.82,-1.01,0.06,2.5,1.08,0,">1 nonsynonymous","I88L V153L",2
"lib2","SARS-CoV-2","GGCTCCTCAGGATGAT",4,19.15,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F12W S113K Y143R",3
"lib2","SARS-CoV-2","GGCTCCTGACCGACAT",1,5.8,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","GGCTCGAACAGTTCGG",6,70.3,10.47,-0.37,0.03,2.9,1.07,0,">1 nonsynonymous","F134L H189Y",2
"lib2","SARS-CoV-2","GGCTCGCCTAGTACCA",1,49.46,10.79,-0.05,0.05,2.94,1.08,0,">1 nonsynonymous","C61S T100Y",2
"lib2","SARS-CoV-2","GGCTCGGCACATATTA",3,6.13,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","I88S I138W L183D",3
"lib2","SARS-CoV-2","GGCTCGGTAATAACTG",1,23.72,8.88,-1.95,0.25,1.5,1.02,0.03,">1 nonsynonymous","L60N A105M K114W P149T",4
"lib2","SARS-CoV-2","GGCTCGTACAAACACA",5,50.33,10.91,0.07,0.07,2.98,1.04,0,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","GGCTCGTATGCGTGTT",2,17.78,10.64,-0.19,0.06,2.98,1.02,0,">1 nonsynonymous","C61F K128S",2
"lib2","SARS-CoV-2","GGCTCGTGCCTGCCCT",15,149.54,6.63,-4.21,0.4,1.5,1.2,0.02,">1 nonsynonymous","F99T K114T",2
"lib2","SARS-CoV-2","GGCTCGTTACAAACCC",2,1.59,NA,NA,NA,NA,NA,NA,"stop","L95* N107V",2
"lib2","SARS-CoV-2","GGCTCTAAAACAGAAA",6,27.27,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","F99H S113Q",2
"lib2","SARS-CoV-2","GGCTCTAAAACCAGAA",1,80.68,10.01,-0.83,0.05,2.95,1.07,0,">1 nonsynonymous","L60A P169F",2
"lib2","SARS-CoV-2","GGCTCTAAAAGATGAC",1,27.84,10.12,-0.72,0.19,2.03,1.18,0.01,">1 nonsynonymous","D34T G83Y S184T",3
"lib2","SARS-CoV-2","GGCTCTAACAGAGTTG",2,39.82,7.28,-3.55,0.28,1.5,1.02,0.02,">1 nonsynonymous","R73V R78L K199L",3
"lib2","SARS-CoV-2","GGCTCTAATTAATGCT",1,9.22,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","L95H N157C Q176F",3
"lib2","SARS-CoV-2","GGCTCTGACTAAAAGA",4,2.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M C49V V103Q N171I",4
"lib2","SARS-CoV-2","GGCTCTGCATACGTTC",7,90.91,6.3,-4.54,0.6,1.5,1.19,0.02,">1 nonsynonymous","P7L V103L",2
"lib2","SARS-CoV-2","GGCTCTTCCAAACTCA",1,56.04,10.85,0.01,0.04,2.97,1.03,0,">1 nonsynonymous","T3S T201K",2
"lib2","SARS-CoV-2","GGCTCTTGGATGAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","F44* K87G P96M S113L",4
"lib2","SARS-CoV-2","GGCTGAACGAATCCTG",2,22.18,10.9,0.07,0.13,2.75,1.21,0,"synonymous","",0
"lib2","SARS-CoV-2","GGCTGAACTTAGTGTT",2,55.88,9.76,-1.08,0.09,2.58,1.09,0,">1 nonsynonymous","F44G Y66I G152C",3
"lib2","SARS-CoV-2","GGCTGAAGTATTATGC",17,155.24,10.33,-0.51,0.03,2.9,1.1,0,">1 nonsynonymous","L38I G174R",2
"lib2","SARS-CoV-2","GGCTGAATAAGCGAAT",3,41.22,8.83,-2,0.14,1.82,1.04,0.01,">1 nonsynonymous","S41R V77F",2
"lib2","SARS-CoV-2","GGCTGAATCGGCTACT",5,56.77,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F62T T100S P177G",3
"lib2","SARS-CoV-2","GGCTGACAAAGCCCAT",11,89.95,7.35,-3.49,0.24,1.5,1.15,0.02,">1 nonsynonymous","C61P A81T Y91A Y123F",4
"lib2","SARS-CoV-2","GGCTGACACAAGCTTC",3,35.99,10.31,-0.53,0.06,2.83,1.12,0,">1 nonsynonymous","A42C S129I",2
"lib2","SARS-CoV-2","GGCTGACACGCCGTGA",1,42.11,8.72,-2.11,0.24,1.5,1.15,0.02,">1 nonsynonymous","V32K P82I D98S",3
"lib2","SARS-CoV-2","GGCTGACAGACCTCAA",1,16.23,9.13,-1.71,0.27,1.5,1.02,0.07,">1 nonsynonymous","V37F E76S P133L K199T",4
"lib2","SARS-CoV-2","GGCTGACGAATAAAGT",6,2.04,NA,NA,NA,NA,NA,NA,"stop","N40P Y159*",2
"lib2","SARS-CoV-2","GGCTGACGCGGGTAAA",7,138.53,10.56,-0.27,0.03,2.93,1.03,0,">1 nonsynonymous","V32L N64G",2
"lib2","SARS-CoV-2","GGCTGACGTTTCCTAA",1,26.26,8.13,-2.71,0.12,2.1,1.08,0.01,">1 nonsynonymous","F44W D75R N157E S164F",4
"lib2","SARS-CoV-2","GGCTGATTGGGCACTA",5,16,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","E10T A42H A81T K114L V153G F167S",6
"lib2","SARS-CoV-2","GGCTGATTGTTCAATA",1,11.36,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","G83N C102R H189Y",3
"lib2","SARS-CoV-2","GGCTGCAGACTCAACC",6,55.55,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I28P N92T L122E G146T",4
"lib2","SARS-CoV-2","GGCTGCATGACAAAGT",2,16.85,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","C6I G117D I138Y",3
"lib2","SARS-CoV-2","GGCTGCCCACATACAA",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130Y N157Y",2
"lib2","SARS-CoV-2","GGCTGCCCCTACTCTC",2,30.5,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","A89H L95S",2
"lib2","SARS-CoV-2","GGCTGCGATGCTCAGA",6,35.07,10.19,-0.65,0.07,2.74,1.09,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","GGCTGCGTCTATACTT",1,40.15,9.68,-1.16,0.1,2.03,1.09,0,"1 nonsynonymous","V11G",1
"lib2","SARS-CoV-2","GGCTGCTAACAGGGAG",1,11.85,10.85,0.01,0.1,2.98,1.06,0.01,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","GGCTGCTATGGTCCCC",3,15.45,10.88,0.04,0.06,2.96,1.04,0,">1 nonsynonymous","A42R T201K",2
"lib2","SARS-CoV-2","GGCTGGAAGTGTTGGT",2,5.4,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","F44T I88Y",2
"lib2","SARS-CoV-2","GGCTGGACTAAGTAAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGCTGGAGACGAATAG",2,29.26,9.73,-1.1,0.11,2.17,1.09,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GGCTGGCTACGCGAAC",2,16.42,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","D59S Y93F A105V G146W Y159T",5
"lib2","SARS-CoV-2","GGCTGGGCGACGCCAA",4,74.61,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S19P T55A G83Y V115W T140V S147L Q168I Y175S",8
"lib2","SARS-CoV-2","GGCTGGTATACCCTAT",5,0.57,NA,NA,NA,NA,NA,NA,"stop","Y21*",1
"lib2","SARS-CoV-2","GGCTGGTCTAGACACA",9,1.62,NA,NA,NA,NA,NA,NA,"stop","L57S Y91V K114E N157R V173F Y178*",6
"lib2","SARS-CoV-2","GGCTGGTGGGCGAGAG",15,188.44,10.85,0.01,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTGTACCCTCTCAA",11,97.98,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G9M I28R G86S A190P",4
"lib2","SARS-CoV-2","GGCTGTAGGGGGAACT",4,53.98,9.1,-1.74,0.06,2.09,1.02,0,">1 nonsynonymous","E10I L38Y F156V",3
"lib2","SARS-CoV-2","GGCTGTATTCTCTAGC",5,17.94,6,-4.84,2,1.5,1.5,0.05,">1 nonsynonymous","N13E P96M F160Y G166Q",4
"lib2","SARS-CoV-2","GGCTGTCATAAAAAGC",3,0.76,NA,NA,NA,NA,NA,NA,"stop","F8N K26* L38I F99I",4
"lib2","SARS-CoV-2","GGCTGTTGTGGCTTTT",2,46.41,9.89,-0.95,0.09,2.23,1,0,"1 nonsynonymous","K48G",1
"lib2","SARS-CoV-2","GGCTTAAAAAACTCGT",5,20.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56L S129R",2
"lib2","SARS-CoV-2","GGCTTAAAGAGGCTAA",2,36.57,10.91,0.07,0.07,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GGCTTAAAGCCCGTAG",2,0.47,NA,NA,NA,NA,NA,NA,"stop","N157Y V173*",2
"lib2","SARS-CoV-2","GGCTTAACAGTATAAA",3,62.74,8.9,-1.93,0.06,2.95,1.04,0,"1 nonsynonymous","Y143Q",1
"lib2","SARS-CoV-2","GGCTTAACCTGACCCG",7,40.58,10.33,-0.51,0.09,2.76,1.02,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","GGCTTAAGATTTCATA",5,41.28,10.73,-0.1,0.05,2.88,1.08,0,"1 nonsynonymous","P169T",1
"lib2","SARS-CoV-2","GGCTTAATCCTCTATC",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I A105L D112R",3
"lib2","SARS-CoV-2","GGCTTAATGATCGATG",3,38.72,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N130E I138K P161R",3
"lib2","SARS-CoV-2","GGCTTAATTAACCCAT",9,165.07,9.32,-1.52,0.06,2.84,1.11,0,"1 nonsynonymous","G166C",1
"lib2","SARS-CoV-2","GGCTTACAAACTTCAG",6,47.15,8.43,-2.4,0.17,1.6,1.24,0.01,">1 nonsynonymous","V32L G83R D98N D112V",4
"lib2","SARS-CoV-2","GGCTTACAACACAAAA",5,9.34,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C102Q K198G",2
"lib2","SARS-CoV-2","GGCTTACACACGCTAT",24,2.61,NA,NA,NA,NA,NA,NA,"stop","T55* K87I F99V L122H D137T",5
"lib2","SARS-CoV-2","GGCTTACCCCGCCGTT",4,16.34,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S41C L122D R136H I142T",4
"lib2","SARS-CoV-2","GGCTTACCGTCAACCA",4,144.8,10.84,0,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTTACTAGAATCTA",10,8.56,NA,NA,NA,NA,NA,NA,"stop","G9E L57H Q163* A192V",4
"lib2","SARS-CoV-2","GGCTTACTATGCTATG",7,243.68,10.66,-0.18,0.03,2.86,1.12,0,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","GGCTTAGACTTTATCC",2,28.98,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","Y123T I142N T170N",3
"lib2","SARS-CoV-2","GGCTTAGGAGTTACTC",1,26.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12H N130S V180T P197K",4
"lib2","SARS-CoV-2","GGCTTAGTTCTTGTCC",4,74.25,10.71,-0.13,0.04,2.99,1,0,">1 nonsynonymous","T100R E141M",2
"lib2","SARS-CoV-2","GGCTTATACAACATAA",3,57.05,6,-4.84,1.81,3,1.19,0,">1 nonsynonymous","D90S R124D I138R",3
"lib2","SARS-CoV-2","GGCTTATCGGACACAT",5,1.74,NA,NA,NA,NA,NA,NA,"stop","L5C F156C S164D V173* R179L",5
"lib2","SARS-CoV-2","GGCTTATGATAATACC",5,180.06,10.32,-0.51,0.03,2.91,1.06,0,">1 nonsynonymous","E10G V32W K48N T201R",4
"lib2","SARS-CoV-2","GGCTTCAACAAAATAC",2,22.27,6.48,-4.36,0.62,1.5,1.15,0.05,">1 nonsynonymous","I142S P149K Y165R",3
"lib2","SARS-CoV-2","GGCTTCAACGGCCCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32K T100Y N118Q V153W",4
"lib2","SARS-CoV-2","GGCTTCAAGTTGAAAC",2,48.05,10.7,-0.14,0.05,3,1.03,0,">1 nonsynonymous","V37E C61P",2
"lib2","SARS-CoV-2","GGCTTCAGTGTTCAGC",1,42.21,10.58,-0.26,0.03,2.94,1.05,0,"1 nonsynonymous","Y178W",1
"lib2","SARS-CoV-2","GGCTTCATAACATTGA",8,1.59,NA,NA,NA,NA,NA,NA,"stop","D34R A89T P96M N107C I138* G152F F156S",7
"lib2","SARS-CoV-2","GGCTTCATACCTTCAA",7,30.09,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","G74L I138Q C150I V180N E186L A190S T201G",7
"lib2","SARS-CoV-2","GGCTTCCACAACTACA",9,24.03,6,-4.84,1.41,3,1.13,0.01,">1 nonsynonymous","E10V R73L D137F",3
"lib2","SARS-CoV-2","GGCTTCCACCGAGCCA",3,39.26,9.4,-1.44,0.08,1.81,1.07,0,">1 nonsynonymous","P7S F17L I142Y",3
"lib2","SARS-CoV-2","GGCTTCCGCCATGAAA",3,67.44,10.85,0.01,0.06,2.96,1.07,0,">1 nonsynonymous","S29E N130R A190Y",3
"lib2","SARS-CoV-2","GGCTTCCGCTTATAGT",5,83.06,10.03,-0.81,0.09,2.56,1,0,">1 nonsynonymous","K48N G83Q D98M",3
"lib2","SARS-CoV-2","GGCTTCCGTCTGATAG",5,31.83,8.35,-2.49,0.21,2.19,1.04,0.02,">1 nonsynonymous","A42S K87L N118I E141F",4
"lib2","SARS-CoV-2","GGCTTCCTAACAGTAA",2,79.03,10.86,0.03,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTTCCTACAACTGC",1,36.14,10.09,-0.75,0.1,2.78,1,0.01,">1 nonsynonymous","R27G F62V T100K",3
"lib2","SARS-CoV-2","GGCTTCGTTGTATTTA",8,2.1,NA,NA,NA,NA,NA,NA,"stop","Q168*",1
"lib2","SARS-CoV-2","GGCTTCTGCCATCCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40F G101F K128*",3
"lib2","SARS-CoV-2","GGCTTCTTAAGTTATT",3,21.11,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N4V K94V P177C",3
"lib2","SARS-CoV-2","GGCTTCTTTTAATCAA",3,39.28,10.64,-0.2,0.08,2.96,1.07,0,"1 nonsynonymous","T148A",1
"lib2","SARS-CoV-2","GGCTTGAACCTCGACG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","W23* G86P N92L R136M P197C",5
"lib2","SARS-CoV-2","GGCTTGAAGATATTTA",2,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","GGCTTGATAGGACCAA",5,169.17,10.77,-0.06,0.04,2.94,1.07,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","GGCTTGATAGTCTCGT",5,124.85,8.01,-2.82,0.17,1.5,1.08,0.01,">1 nonsynonymous","Q176R V181I",2
"lib2","SARS-CoV-2","GGCTTGCAGGGACACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L I88G F99T A105S",4
"lib2","SARS-CoV-2","GGCTTGCAGTAGAACG",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F Y21V D59G",3
"lib2","SARS-CoV-2","GGCTTGCGGGAAATAT",9,13.33,NA,NA,NA,NA,NA,NA,"stop","R73Y A81* F134L T148P",4
"lib2","SARS-CoV-2","GGCTTGCTCACGGACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGCTTGGAGTGCATTG",6,20.37,6.48,-4.35,0.45,1.5,1.04,0.02,">1 nonsynonymous","N107D V181E",2
"lib2","SARS-CoV-2","GGCTTGGCCGATACGC",3,53.36,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A22I S36R G51M N92R S129G",5
"lib2","SARS-CoV-2","GGCTTGGTAATGAATA",1,21.9,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L57G D98M Y143P",3
"lib2","SARS-CoV-2","GGCTTGTATACAGCTC",10,33.15,7.48,-3.35,0.36,1.5,1.05,0.04,">1 nonsynonymous","T15S D34R G74F",3
"lib2","SARS-CoV-2","GGCTTGTCTAAACACC",7,110.83,10.69,-0.15,0.05,2.94,1.05,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","GGCTTTAAGCAGAGCT",5,84.46,10.2,-0.63,0.03,3,1.02,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","GGCTTTAATCTAACTT",1,14.21,6.05,-4.79,1.08,1.5,1.12,0.02,">1 nonsynonymous","I2A D112G T140E",3
"lib2","SARS-CoV-2","GGCTTTACACGCCCAA",2,30.82,10.89,0.06,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGCTTTACATCAAATA",13,2.23,NA,NA,NA,NA,NA,NA,"stop","D59W Y119* S129T P197Q",4
"lib2","SARS-CoV-2","GGCTTTATACACAATT",6,5.07,NA,NA,NA,NA,NA,NA,"stop","Y39S I80*",2
"lib2","SARS-CoV-2","GGCTTTATCAAACCGA",3,21.22,6,-4.84,2,1.5,1.37,0.06,">1 nonsynonymous","V11I C49F P96F Y119L",4
"lib2","SARS-CoV-2","GGCTTTATCGACACAA",11,69.22,6.12,-4.72,1.03,1.5,1.22,0.02,">1 nonsynonymous","C49R N64A",2
"lib2","SARS-CoV-2","GGCTTTATGGATAAGT",1,7.71,10.67,-0.17,0.09,2.77,1.23,0,"1 nonsynonymous","L60G",1
"lib2","SARS-CoV-2","GGCTTTATTGCTCTAG",1,96.42,6.58,-4.26,0.24,1.57,1.13,0.01,">1 nonsynonymous","P82D L131H T170R",3
"lib2","SARS-CoV-2","GGCTTTCAAAGGCTTC",17,79.28,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11Y N120L F167T",3
"lib2","SARS-CoV-2","GGCTTTCCTTAACGGT",1,30.86,6.26,-4.57,0.81,1.5,1.15,0.03,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GGCTTTCTCTCCGCCA",3,23.87,6,-4.84,1.7,1.5,1.26,0.04,">1 nonsynonymous","C49K L57M",2
"lib2","SARS-CoV-2","GGCTTTCTGATACTAG",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2A D59V D90N",3
"lib2","SARS-CoV-2","GGCTTTCTTTCTCCTA",4,32.72,6,-4.84,0.86,1.5,1.06,0.01,">1 nonsynonymous","G101L Y178S",2
"lib2","SARS-CoV-2","GGCTTTGACTAGATCT",1,4.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","GGCTTTGTATAATGAT",4,44.53,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14V F99Y R127L N157M V173L P177Q",6
"lib2","SARS-CoV-2","GGCTTTTACAAATGAC",7,50.05,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I104M P133D A145S P149S Y175T",5
"lib2","SARS-CoV-2","GGCTTTTTAATGACCA",6,63.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T P96S S139W",3
"lib2","SARS-CoV-2","GGCTTTTTCACATCAA",3,22.05,7.37,-3.47,0.35,1.5,1.14,0.04,">1 nonsynonymous","W23K Y175F",2
"lib2","SARS-CoV-2","GGCTTTTTTAAACCAT",2,18.25,7.94,-2.9,0.38,1.5,1.17,0.04,">1 nonsynonymous","G9T L57Y T140P",3
"lib2","SARS-CoV-2","GGGAAAAAACAGTACG",4,25.24,6.17,-4.67,1.01,1.5,1.12,0.03,">1 nonsynonymous","S36N L95V V103W",3
"lib2","SARS-CoV-2","GGGAAAAAATCAGACG",9,41.82,6.08,-4.76,0.97,1.5,1.15,0.03,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","GGGAAAAATATTGTAA",4,13.91,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A33P Y123G I138S",3
"lib2","SARS-CoV-2","GGGAAAACAAGGCGGT",5,899.34,10.34,-0.5,0.02,2.87,1.01,0,">1 nonsynonymous","L5S P96N",2
"lib2","SARS-CoV-2","GGGAAAACCGATACCT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y Y66R C102R L125R S139N A145R",6
"lib2","SARS-CoV-2","GGGAAAACGCACATAA",3,54.19,6.25,-4.58,0.59,1.5,1.12,0.02,">1 nonsynonymous","F44H K132I Y143K N157L",4
"lib2","SARS-CoV-2","GGGAAAACGCCTTCAA",1,0.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26E",1
"lib2","SARS-CoV-2","GGGAAAAGACTGCCCG",6,53.83,6,-4.84,1.84,1.5,1.1,0,">1 nonsynonymous","L60S K94Q P161F R179G",4
"lib2","SARS-CoV-2","GGGAAAATAATATACC",6,115.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9S N40T N151P R179T",4
"lib2","SARS-CoV-2","GGGAAAATGCATAAGC",17,88.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14T I88R",2
"lib2","SARS-CoV-2","GGGAAAATTGACGACT",2,12.61,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","Q84T Y91I V115L S147L Q176L S200E",6
"lib2","SARS-CoV-2","GGGAAACAAAAAGAAA",14,67.72,8.66,-2.18,0.27,1.63,1.13,0.03,">1 nonsynonymous","A14N P82L",2
"lib2","SARS-CoV-2","GGGAAACCCCCATTAG",12,79.64,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","F62R Y93V T100L S129M G146L G196A",6
"lib2","SARS-CoV-2","GGGAAACTATGTACCA",2,27.6,9.36,-1.48,0.1,1.94,1.04,0,">1 nonsynonymous","Y50S V77L",2
"lib2","SARS-CoV-2","GGGAAACTTAGTGACC",3,8.35,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","P7K Y21L A33F P96F",4
"lib2","SARS-CoV-2","GGGAAAGATAACCGAT",8,23.72,6,-4.84,1.48,3,1.15,0.01,">1 nonsynonymous","N1Y V103S Y119I F134L",4
"lib2","SARS-CoV-2","GGGAAATAACATTACG",2,44.99,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N64P I88S F99K",3
"lib2","SARS-CoV-2","GGGAAATAACCATGAA",3,38.57,10.92,0.09,0.06,2.93,1.06,0,">1 nonsynonymous","E10D A190V",2
"lib2","SARS-CoV-2","GGGAAATAATATTGTC",2,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I T100F E135G V180N",4
"lib2","SARS-CoV-2","GGGAAATAGCTTATCA",10,151.28,8,-2.84,0.12,1.55,1.07,0.01,">1 nonsynonymous","Y91N G155C G166R",3
"lib2","SARS-CoV-2","GGGAAATATTACGATA",6,48.58,10.78,-0.05,0.09,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAAATCCCACTAAA",7,92.27,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D59G A67R D112S K128S T140D",5
"lib2","SARS-CoV-2","GGGAAATCTAACTACC",3,75.19,10.82,-0.01,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAAATGAAATGCAT",8,1.36,NA,NA,NA,NA,NA,NA,"stop","K48* Y119E E135C T148F",4
"lib2","SARS-CoV-2","GGGAAATGAACCTGAG",1,6.51,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","D68M I88N I104M G174Q",4
"lib2","SARS-CoV-2","GGGAAATGAGCAAAGC",3,30.86,8.34,-2.5,0.16,2.15,1.09,0.01,">1 nonsynonymous","A33S F44C Y119R",3
"lib2","SARS-CoV-2","GGGAAATTTACTGCGA",7,104.34,10.78,-0.06,0.04,2.85,1.11,0,">1 nonsynonymous","T100C T201C",2
"lib2","SARS-CoV-2","GGGAACAAAAGCCTAA",5,51.77,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C6M T63A Y165T",3
"lib2","SARS-CoV-2","GGGAACAACGATAACA",8,67.4,10.66,-0.17,0.11,2.72,1.08,0,"1 nonsynonymous","N171I",1
"lib2","SARS-CoV-2","GGGAACACACTTATCG",2,50.71,10.76,-0.08,0.06,2.87,1.13,0,"1 nonsynonymous","S45E",1
"lib2","SARS-CoV-2","GGGAACACCCATAATA",11,129.6,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C31T T55I T63V C158I",4
"lib2","SARS-CoV-2","GGGAACACTTACTATA",8,89.11,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T85V G101S G116N",3
"lib2","SARS-CoV-2","GGGAACAGCAAAATGC",8,75.11,10.68,-0.15,0.05,2.81,1.13,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","GGGAACATGGACTACA",10,59.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L95P Y143I N151T",3
"lib2","SARS-CoV-2","GGGAACCATGAATATC",1,11.48,8.81,-2.03,0.27,2.56,1.14,0.02,">1 nonsynonymous","R27I Y143T",2
"lib2","SARS-CoV-2","GGGAACCCGCGTAACG",2,0,NA,NA,NA,NA,NA,NA,"stop","E10A F99* G174Q",3
"lib2","SARS-CoV-2","GGGAACCTAGAGTGAC",10,75.67,10.74,-0.09,0.05,2.94,1.06,0,">1 nonsynonymous","T63K E186N",2
"lib2","SARS-CoV-2","GGGAACGATATTCAGA",2,24.77,10.73,-0.1,0.06,2.97,1.07,0,"1 nonsynonymous","N1C",1
"lib2","SARS-CoV-2","GGGAACTAAGAATAAA",9,25.6,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N13H T55S D68M A89S",4
"lib2","SARS-CoV-2","GGGAACTACCACAATA",14,5.43,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib2","SARS-CoV-2","GGGAACTATGACAAAT",2,31.05,6,-4.84,0.9,2.55,1.13,0,">1 nonsynonymous","A14K C150F E154A",3
"lib2","SARS-CoV-2","GGGAACTCTAATGCGC",4,48.12,10.41,-0.42,0.04,2.95,1,0,">1 nonsynonymous","I2G K48H L60V I142L",4
"lib2","SARS-CoV-2","GGGAACTGTATGTCGT",24,85.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18S G101R",2
"lib2","SARS-CoV-2","GGGAAGAGACCATTGA",1,8.5,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C6L L60Y A89M",3
"lib2","SARS-CoV-2","GGGAAGAGCCTGATAC",2,19.94,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","P82S K94E F160C",3
"lib2","SARS-CoV-2","GGGAAGCTCGTACACC",2,31.5,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T15H G146L E154T P161D Q176S K199T",6
"lib2","SARS-CoV-2","GGGAAGCTGAAACAAA",1,68.9,10.1,-0.74,0.08,2.25,1,0,">1 nonsynonymous","N13E C49W",2
"lib2","SARS-CoV-2","GGGAAGCTGCGAAACT",7,162.87,10.8,-0.04,0.04,2.95,1.05,0,"1 nonsynonymous","N151L",1
"lib2","SARS-CoV-2","GGGAAGGGCTCATGTT",4,22.94,6.73,-4.1,0.53,1.5,1.13,0.05,">1 nonsynonymous","F12N A105R",2
"lib2","SARS-CoV-2","GGGAAGGGGAAGCCGA",2,44.6,10.69,-0.15,0.04,2.97,1.07,0,"1 nonsynonymous","K48I",1
"lib2","SARS-CoV-2","GGGAAGGTGTTGTAAC",2,13.42,8.96,-1.88,0.23,2.12,1.31,0.03,">1 nonsynonymous","V11F N118Y",2
"lib2","SARS-CoV-2","GGGAAGTATAAGATTA",3,63.79,10.82,-0.02,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAAGTCACGTAATG",6,63.66,10.98,0.14,0.09,2.84,1.09,0,">1 nonsynonymous","I104W L122A",2
"lib2","SARS-CoV-2","GGGAAGTTGGGCAACA",6,2.38,NA,NA,NA,NA,NA,NA,"stop","P133S P149* K198T",3
"lib2","SARS-CoV-2","GGGAAGTTTTTCACCA",2,62.16,10.62,-0.21,0.08,2.93,1.06,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","GGGAATAAATGTTAAA",7,185.9,9.76,-1.08,0.05,2.93,1.03,0,">1 nonsynonymous","V32E F126V S129N E186P",4
"lib2","SARS-CoV-2","GGGAATAACATTTATC",6,54.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F99L Y121W P149I G174N",4
"lib2","SARS-CoV-2","GGGAATAAGCACATAT",12,41.79,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","C6F C61G R127K G155Y N171T",5
"lib2","SARS-CoV-2","GGGAATAAGCGGCACA",4,39.09,9.8,-1.04,0.08,2.66,1,0,">1 nonsynonymous","I80L E154H",2
"lib2","SARS-CoV-2","GGGAATACCCTTAAGG",3,12.02,8.05,-2.78,0.46,2.4,1.15,0.06,">1 nonsynonymous","S43T C61M Y143A",3
"lib2","SARS-CoV-2","GGGAATACTTGACGTG",3,29.08,8.28,-2.56,0.16,2.73,1,0.01,">1 nonsynonymous","N118L Q144P F156P",3
"lib2","SARS-CoV-2","GGGAATAGCAGTAAGG",7,98.81,8.98,-1.86,0.17,1.5,1.03,0.01,">1 nonsynonymous","W106T Y123Q",2
"lib2","SARS-CoV-2","GGGAATAGGAACGACA",1,10.74,10.59,-0.25,0.15,2.9,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGGAATAGTGAAGCAA",1,11.01,9.79,-1.05,0.18,2.37,1,0.01,">1 nonsynonymous","C61H W106L",2
"lib2","SARS-CoV-2","GGGAATATATAGCAAA",4,48.66,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S43Y K48I K56A N92P N110R Y175W",6
"lib2","SARS-CoV-2","GGGAATCCCAAACCTA",3,49.02,10.71,-0.13,0.04,2.88,1.14,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","GGGAATCCGTGCCTCA",3,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37S K56R S69Q Y121H",4
"lib2","SARS-CoV-2","GGGAATCGACCCTATA",5,10.25,7.84,-3,0.49,1.5,1.03,0.05,">1 nonsynonymous","N13F C49I A89Y Y175G",4
"lib2","SARS-CoV-2","GGGAATCGCTGAGGCA",8,38.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F44S P96D D137E Y175S",4
"lib2","SARS-CoV-2","GGGAATGAGGATAAGG",9,97.54,10.83,0,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAATGATTCAATAA",9,145.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N130Y C150L",2
"lib2","SARS-CoV-2","GGGAATGGTGTAATCA",9,421.09,10.62,-0.21,0.02,2.95,1.05,0,">1 nonsynonymous","P149C T201K",2
"lib2","SARS-CoV-2","GGGAATGTCCTCAATC",5,153.15,10.03,-0.81,0.04,2.91,1.03,0,">1 nonsynonymous","T55N T85F I138M G174L",4
"lib2","SARS-CoV-2","GGGAATTACAAAAAAT",3,16.49,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1P L57F S69K A81H V173D",5
"lib2","SARS-CoV-2","GGGAATTACGATAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y N13D S36T C49L T85Y K132Y E186A",7
"lib2","SARS-CoV-2","GGGAATTACTACGAAT",3,2.43,NA,NA,NA,NA,NA,NA,"stop","V52G D59N N120A K128M Q144* T170V",6
"lib2","SARS-CoV-2","GGGAATTCACTAGTTC",4,55.49,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5K S19A D112P",3
"lib2","SARS-CoV-2","GGGACAAAAAAGAGCA",3,39.41,10.09,-0.75,0.09,2.4,1.08,0,"1 nonsynonymous","L95C",1
"lib2","SARS-CoV-2","GGGACAAAAATCTGTA",9,138.85,8.21,-2.62,0.14,2.06,1.08,0.01,">1 nonsynonymous","G51L Y119D E186D",3
"lib2","SARS-CoV-2","GGGACAAAAGCCAAAG",19,312.93,10.36,-0.48,0.02,2.9,1.06,0,">1 nonsynonymous","V20P K132H",2
"lib2","SARS-CoV-2","GGGACAAAATATGCAC",5,93.14,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","I2N N92S F167I",3
"lib2","SARS-CoV-2","GGGACAAATTCCAAGA",6,0.86,NA,NA,NA,NA,NA,NA,"stop","L5I V11L R73* F156V",4
"lib2","SARS-CoV-2","GGGACAAGAAGAATAG",5,42.6,6.5,-4.33,0.56,1.5,1.19,0.03,">1 nonsynonymous","N40T T55G N64D C102P F156L",5
"lib2","SARS-CoV-2","GGGACAAGTAGAGACA",19,309.42,10.34,-0.49,0.04,2.92,1.04,0,">1 nonsynonymous","V11L C61W",2
"lib2","SARS-CoV-2","GGGACAAGTTTCAAAC",4,77.45,10.78,-0.06,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACAATATTGCATC",1,8.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A89M Y119A",2
"lib2","SARS-CoV-2","GGGACAATTGCAGACG",11,131.51,10.49,-0.35,0.04,2.9,1.06,0,"1 nonsynonymous","T63F",1
"lib2","SARS-CoV-2","GGGACACAAAATTACT",1,5.7,10.45,-0.38,0.13,3,1,0.01,"1 nonsynonymous","A105V",1
"lib2","SARS-CoV-2","GGGACACACACCTGGT",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R N40A",2
"lib2","SARS-CoV-2","GGGACACATAATATTA",2,52.77,10.25,-0.58,0.04,2.84,1.01,0,">1 nonsynonymous","V11I I88L",2
"lib2","SARS-CoV-2","GGGACACATTGTACGC",4,47.41,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A105L S113T Y123V T140R",4
"lib2","SARS-CoV-2","GGGACACCATTAGGAT",15,2.85,NA,NA,NA,NA,NA,NA,"stop","G9D V37I L60* I80M F156D",5
"lib2","SARS-CoV-2","GGGACACCCTATTGAA",1,11.62,7.92,-2.91,0.33,1.5,1.12,0.02,">1 nonsynonymous","N40S P96M G166S",3
"lib2","SARS-CoV-2","GGGACACTACAAAGAA",4,17.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y50C E141V Y178R",3
"lib2","SARS-CoV-2","GGGACACTCAGGGACA",17,74.3,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T85D F99S",2
"lib2","SARS-CoV-2","GGGACACTCCGCGCTA",4,31.52,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V52I V77F G83C W106C V153I S200L",6
"lib2","SARS-CoV-2","GGGACACTGATCTGAG",10,182.4,8.29,-2.55,0.1,2.35,1.11,0,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","GGGACACTGTATTACC",6,0,NA,NA,NA,NA,NA,NA,"stop","T170*",1
"lib2","SARS-CoV-2","GGGACACTTATTCAAA",9,174.68,10.86,0.02,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACAGAACTTGCGG",8,128.44,10.01,-0.83,0.04,2.6,1.04,0,">1 nonsynonymous","D98E P161A",2
"lib2","SARS-CoV-2","GGGACAGATTTGGATT",15,7.31,NA,NA,NA,NA,NA,NA,"stop","D90L Y123C I142*",3
"lib2","SARS-CoV-2","GGGACAGGATCCATCT",3,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K A33V S41N",3
"lib2","SARS-CoV-2","GGGACAGGCACCCTCG",7,4.53,NA,NA,NA,NA,NA,NA,"stop","S41* T85* R127V G166L",4
"lib2","SARS-CoV-2","GGGACATCAGGCGGTT",4,152.46,9.95,-0.89,0.07,2.68,1.03,0,">1 nonsynonymous","T15L T55L G155T",3
"lib2","SARS-CoV-2","GGGACATCCATTCTAG",3,94.52,10.85,0.01,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACATTACTCACGC",3,5.98,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","V71K A89K V173L",3
"lib2","SARS-CoV-2","GGGACATTTTGACAAC",1,27.6,10.89,0.05,0.08,2.94,1.06,0,"1 nonsynonymous","A42E",1
"lib2","SARS-CoV-2","GGGACCAAATACGGTT",5,4.72,NA,NA,NA,NA,NA,NA,"stop","L5* R25* A81P V103T R127D Q168L",6
"lib2","SARS-CoV-2","GGGACCAAATCTCAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","V52N G83V D90F P133S N157V P169*",6
"lib2","SARS-CoV-2","GGGACCAAATTAAAAT",12,173.1,10.78,-0.05,0.11,2.14,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCAACTTGTGTT",6,96.34,6,-4.84,1.18,1.5,1.14,0.01,">1 nonsynonymous","R124S D137N",2
"lib2","SARS-CoV-2","GGGACCAAGAAAATTA",7,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L S69R",2
"lib2","SARS-CoV-2","GGGACCAAGACACGGC",2,13.9,10.29,-0.54,0.17,2.41,1,0.01,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","GGGACCACGTAGATGC",6,40.6,8.66,-2.18,0.08,1.88,1.06,0,">1 nonsynonymous","D75P L183I",2
"lib2","SARS-CoV-2","GGGACCATACCTGTAT",1,15.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17Q Y66R",2
"lib2","SARS-CoV-2","GGGACCCACAATATAC",3,17.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCCACCCTCCCT",3,29.42,9.05,-1.79,0.11,2.83,1.08,0.01,">1 nonsynonymous","P149F T170L",2
"lib2","SARS-CoV-2","GGGACCCATGAACGAA",7,68.7,9.77,-1.07,0.08,1.96,1.03,0,">1 nonsynonymous","Y66L Y91F P96H",3
"lib2","SARS-CoV-2","GGGACCCCATTAAAGA",1,18.55,10.58,-0.25,0.05,2.89,1.1,0,">1 nonsynonymous","N4H V65I N120F",3
"lib2","SARS-CoV-2","GGGACCCCTTCTTTCG",4,16.17,10.9,0.06,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCCGGCTTATTG",6,48.76,6,-4.84,1.76,1.5,1.17,0.02,">1 nonsynonymous","K48M K56V V103K",3
"lib2","SARS-CoV-2","GGGACCGACTACTTAT",7,68.83,7.25,-3.58,0.33,1.5,1.06,0.03,">1 nonsynonymous","F47I D112L I142L G152S",4
"lib2","SARS-CoV-2","GGGACCGAGAAATAAA",10,267.31,10.49,-0.34,0.04,2.92,1.06,0,"1 nonsynonymous","F47Y",1
"lib2","SARS-CoV-2","GGGACCGCGTACTCGT",1,11.24,10.73,-0.1,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCGGGATGTTGC",12,123.68,9.81,-1.03,0.07,2,1.07,0,">1 nonsynonymous","F47N D90N",2
"lib2","SARS-CoV-2","GGGACCGTCTCGCCTG",10,9.93,10.7,-0.14,0.25,2.8,1,0.02,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCTAGTCTCCCC",3,31.03,10.01,-0.83,0.09,2.11,1.07,0,"1 nonsynonymous","P82I",1
"lib2","SARS-CoV-2","GGGACCTATGATAATA",2,32.43,10.84,0.01,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACCTGATAAAACC",5,50.79,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61R Q79V L95V N109R N151T",5
"lib2","SARS-CoV-2","GGGACCTGGAAGAAGT",4,11.36,8.75,-2.09,0.15,2,1.09,0.01,">1 nonsynonymous","A42D L162W",2
"lib2","SARS-CoV-2","GGGACGACGAAACCTC",8,4.91,NA,NA,NA,NA,NA,NA,"stop","N4I G9N K56Q V65*",4
"lib2","SARS-CoV-2","GGGACGATATGTCATG",4,47.41,10.94,0.11,0.07,2.93,1.09,0,"1 nonsynonymous","V65L",1
"lib2","SARS-CoV-2","GGGACGATGTCGACGC",12,2.46,NA,NA,NA,NA,NA,NA,"stop","A33* K94A K132V S139H",4
"lib2","SARS-CoV-2","GGGACGCACCGTTCCG",3,18.12,6,-4.84,2,1.5,1.11,0.02,"1 nonsynonymous","I80S",1
"lib2","SARS-CoV-2","GGGACGCACGTCGTTC",5,64.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P7S I28S G83R Y93C D98S T201S",6
"lib2","SARS-CoV-2","GGGACGCATACTAGAG",25,296.15,10.07,-0.77,0.05,2.56,1.07,0,">1 nonsynonymous","N58S E135V",2
"lib2","SARS-CoV-2","GGGACGCCCAAATTGT",5,58.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8Y V32A C150M",3
"lib2","SARS-CoV-2","GGGACGGATATATGCA",16,87.95,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L38Q P54G C61V W106R P149W",5
"lib2","SARS-CoV-2","GGGACGGCCATCGACT",2,52.57,9.6,-1.24,0.08,2.16,1.02,0,">1 nonsynonymous","L60A A89S G155C",3
"lib2","SARS-CoV-2","GGGACGGCTAGATAGG",7,98.36,10.8,-0.04,0.06,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGACGTAAAAGATCA",2,6.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L Y50K S139L Y178Q",4
"lib2","SARS-CoV-2","GGGACGTGAGACATAC",1,6.53,7.45,-3.38,0.28,1.96,1.09,0.01,">1 nonsynonymous","W23C N24R V103G",3
"lib2","SARS-CoV-2","GGGACGTTCGAAATAG",4,24.26,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V65L L95R K114Y Y165E",4
"lib2","SARS-CoV-2","GGGACTAAGGAAAAGG",5,53.6,9.75,-1.08,0.07,2.08,1.05,0,">1 nonsynonymous","G51C P149M",2
"lib2","SARS-CoV-2","GGGACTATTGAAAGAC",5,56.77,6.11,-4.73,0.43,1.65,1.12,0,">1 nonsynonymous","S69Q G117S T170R V173I",4
"lib2","SARS-CoV-2","GGGACTCAAAAAACTT",4,36.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K56A T85K N107Q V180F",4
"lib2","SARS-CoV-2","GGGACTCATACAATTG",3,19.14,9.88,-0.96,0.15,2.05,1.06,0.01,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","GGGACTCCATAAATAA",8,0.86,NA,NA,NA,NA,NA,NA,"stop","F99V L131* Q163L",3
"lib2","SARS-CoV-2","GGGACTCCCGACGACA",10,127.27,10.3,-0.54,0.06,2.87,1.05,0,">1 nonsynonymous","N151I N171I",2
"lib2","SARS-CoV-2","GGGACTCTAAATGACT",4,59.77,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y39D S43P N107H E141P P161V",5
"lib2","SARS-CoV-2","GGGACTCTAATAGAAA",5,30.27,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N1S R27E D90A C102V D112S N120V N171F",7
"lib2","SARS-CoV-2","GGGACTGCAATAATCC",8,74.6,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N92R F126T",2
"lib2","SARS-CoV-2","GGGACTGGCTAACTGA",5,64.82,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D68E V77G S129N",3
"lib2","SARS-CoV-2","GGGACTTAGTGGAAAT",1,36.68,10.55,-0.28,0.05,2.96,1.06,0,">1 nonsynonymous","I28V V153I T201H",3
"lib2","SARS-CoV-2","GGGACTTCCAGTGACA",8,194.28,10.11,-0.73,0.05,2.64,1.03,0,">1 nonsynonymous","G9L R16Y T100M K128L",4
"lib2","SARS-CoV-2","GGGACTTTAATGTCAT",1,1.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","GGGAGAACCTAATGAT",2,8.35,10.72,-0.12,0.07,3,1.02,0,">1 nonsynonymous","N40T G116S",2
"lib2","SARS-CoV-2","GGGAGAAGAAGCCATA",5,4.86,NA,NA,NA,NA,NA,NA,"stop","N107C Y119*",2
"lib2","SARS-CoV-2","GGGAGACACGAAAATA",2,11.44,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Y91R N120F E135F F160K P161T S184F",6
"lib2","SARS-CoV-2","GGGAGACCGCGATACT",2,8.93,10.73,-0.11,0.04,2.92,1.05,0,"1 nonsynonymous","K132A",1
"lib2","SARS-CoV-2","GGGAGACGATTATGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L R127S P133R Y143M N151F",5
"lib2","SARS-CoV-2","GGGAGACTATAATGTA",2,12.26,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V37D R78L G86P E141Q A190Y",5
"lib2","SARS-CoV-2","GGGAGACTGAGAGACT",3,10.29,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","D98K N107I Q168E G172M",4
"lib2","SARS-CoV-2","GGGAGAGAAAGAATCG",2,25.05,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I104C N120F F156P R179E",4
"lib2","SARS-CoV-2","GGGAGAGAAGATGCAA",6,3.4,NA,NA,NA,NA,NA,NA,"stop","K56* F185D",2
"lib2","SARS-CoV-2","GGGAGAGACCAGGGAG",3,20.88,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27Q Y35D A89K P133L P149S T201K",6
"lib2","SARS-CoV-2","GGGAGAGCCATCACAA",8,72.86,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F8G Y143K",2
"lib2","SARS-CoV-2","GGGAGAGTACGAGAAC",3,14.42,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","G9W I88M W106R P169R",4
"lib2","SARS-CoV-2","GGGAGAGTAGCGGTCT",1,42.12,8.04,-2.8,0.21,1.96,1.12,0.02,">1 nonsynonymous","S113W L122H K132D",3
"lib2","SARS-CoV-2","GGGAGAGTGCTTCCAT",1,14.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F62C G101D Q144H",3
"lib2","SARS-CoV-2","GGGAGATCATTCAGCT",15,3.51,NA,NA,NA,NA,NA,NA,"stop","C49* L187T",2
"lib2","SARS-CoV-2","GGGAGATGCAACCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37R G86* R127T",3
"lib2","SARS-CoV-2","GGGAGATGTGCCGCCC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2G V32* K87E Y93M",4
"lib2","SARS-CoV-2","GGGAGCACATGCAACT",3,45.05,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N40Y Y66I P133L",3
"lib2","SARS-CoV-2","GGGAGCATAAAATTCC",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R L60P N64A T201S",4
"lib2","SARS-CoV-2","GGGAGCCTGCCGCATA",1,27.63,10.9,0.06,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAGCGACACCACAA",5,126.17,10.71,-0.13,0.04,2.97,1.04,0,"1 nonsynonymous","K48S",1
"lib2","SARS-CoV-2","GGGAGCGAGAAAATTA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128S D137R S200M",3
"lib2","SARS-CoV-2","GGGAGCGATCAAATTA",2,15.86,6,-4.84,2,1.5,1.05,0.05,">1 nonsynonymous","G51F Q144W P177T",3
"lib2","SARS-CoV-2","GGGAGCGCGTAGGTAC",9,106.77,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y39V W106K K114M G152D N157C T170V",6
"lib2","SARS-CoV-2","GGGAGCTCCAAGCCTT",1,20.93,9.47,-1.37,0.23,1.73,1.15,0.02,">1 nonsynonymous","D90G V115R N120W",3
"lib2","SARS-CoV-2","GGGAGCTTTCGCCAAC",1,49.07,10.77,-0.06,0.05,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAGGAAAAATAACG",3,0,NA,NA,NA,NA,NA,NA,"stop","P7I Q79T N157*",3
"lib2","SARS-CoV-2","GGGAGGATTATCTCAC",4,129.18,10.4,-0.44,0.04,2.93,1.08,0,">1 nonsynonymous","K87R I104L L122W",3
"lib2","SARS-CoV-2","GGGAGGTACCACCTTG",1,28.81,10.9,0.06,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGAGTACGAATAGCA",2,23.63,9.3,-1.53,0.2,1.5,1.15,0.03,">1 nonsynonymous","G83I D98I",2
"lib2","SARS-CoV-2","GGGAGTATAAACCAGC",2,28.24,8.33,-2.5,0.32,1.5,1.02,0.05,">1 nonsynonymous","K94Y G155R",2
"lib2","SARS-CoV-2","GGGAGTATCTAACCAT",14,387.18,10.78,-0.06,0.03,2.96,1.06,0,"1 nonsynonymous","G196R",1
"lib2","SARS-CoV-2","GGGAGTATTTTTGCTG",7,52.04,8.33,-2.51,0.18,1.5,1.07,0.01,">1 nonsynonymous","D98E F99L V115W F156R",4
"lib2","SARS-CoV-2","GGGAGTCAAGAAGTAT",6,64.74,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","L57Q I88A",2
"lib2","SARS-CoV-2","GGGAGTCCAAATAATT",5,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I A42L F62S G83T S164L G172D",6
"lib2","SARS-CoV-2","GGGAGTCCCACTATAC",2,0.5,NA,NA,NA,NA,NA,NA,"stop","C49* G86L N107T S129W",4
"lib2","SARS-CoV-2","GGGAGTCTATTAACAC",1,11.75,6.15,-4.69,0.86,1.5,1.08,0.03,">1 nonsynonymous","P82S Y119L",2
"lib2","SARS-CoV-2","GGGAGTGCCCGATACG",14,690.65,10.82,-0.01,0.04,2.95,1.06,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","GGGAGTGCTGACCCCT",6,83.08,10.77,-0.07,0.04,2.93,1.08,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","GGGAGTTAAAACTACA",5,91.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86N Y159F G166S",3
"lib2","SARS-CoV-2","GGGAGTTAAATACACA",1,27.54,10.67,-0.17,0.05,2.88,1.09,0,"1 nonsynonymous","T63M",1
"lib2","SARS-CoV-2","GGGAGTTATAGACAAA",3,56.72,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2T I72Y L95G N120F R127P I138S K199S",7
"lib2","SARS-CoV-2","GGGAGTTTAATTAGAC",9,174.82,10.58,-0.26,0.01,2.92,1.08,0,">1 nonsynonymous","S41F R136K K198Q",3
"lib2","SARS-CoV-2","GGGATAAAATATTCAT",3,10.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K94C F160V F167R H189Y",4
"lib2","SARS-CoV-2","GGGATAAAGAGTTAGT",1,8.85,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","F17L S29L C61A E141W",4
"lib2","SARS-CoV-2","GGGATAAAGTCAGTCT",1,8.77,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F12H D90K S113K T140M P149H T201P",6
"lib2","SARS-CoV-2","GGGATAAATTCACCTA",12,194.38,10.6,-0.24,0.03,2.91,1.08,0,"1 nonsynonymous","P7M",1
"lib2","SARS-CoV-2","GGGATAACGAGTATGG",18,232.42,10.73,-0.1,0.04,2.94,1.06,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","GGGATAACGCCCTGAG",8,58.86,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","Y93A",1
"lib2","SARS-CoV-2","GGGATAATACACCGAA",10,4.44,NA,NA,NA,NA,NA,NA,"stop","G51S T100L K128A E141* Y165R T170A",6
"lib2","SARS-CoV-2","GGGATAATCTCGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","K48M T85* F156I K198V",4
"lib2","SARS-CoV-2","GGGATACACTGCGTCC",2,60.76,10.88,0.05,0.06,2.89,1.11,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","GGGATACATAATTGCA",1,16.93,10.81,-0.03,0.04,3,1,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","GGGATACCCAGTGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* N107G",2
"lib2","SARS-CoV-2","GGGATACGGTATCAAG",19,188.82,9.67,-1.16,0.04,2.06,1.02,0,">1 nonsynonymous","F8V R27E R136H",3
"lib2","SARS-CoV-2","GGGATACTAAACTGAG",2,29.19,8.85,-1.98,0.13,2.76,1.21,0.01,">1 nonsynonymous","K114L N157G",2
"lib2","SARS-CoV-2","GGGATAGGAACTAGTA",1,0.91,NA,NA,NA,NA,NA,NA,"stop","D97Y W106* L131N",3
"lib2","SARS-CoV-2","GGGATAGGCAACCTAC",1,11.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15S R27A S129I S147M R179K",5
"lib2","SARS-CoV-2","GGGATAGTGGCACGAT",2,5.18,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","N40R C102K Y121P",3
"lib2","SARS-CoV-2","GGGATATAAACGATTA",1,8.28,10.56,-0.28,0.13,2.81,1.15,0.01,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","GGGATATACTGCCTAT",13,5.45,NA,NA,NA,NA,NA,NA,"stop","Y35* K48M",2
"lib2","SARS-CoV-2","GGGATATATATAGTGA",1,40.89,8.34,-2.5,0.07,3,1.03,0,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","GGGATATCACGCGAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","N24K L57* F62Y",3
"lib2","SARS-CoV-2","GGGATATGACCCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V71E P82V C150G Q163T Y175*",5
"lib2","SARS-CoV-2","GGGATATGCCGCCTGT",5,108.07,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T148Y G172V",2
"lib2","SARS-CoV-2","GGGATATGTTTAAACT",4,74.73,10.29,-0.54,0.08,2.83,1.05,0,"1 nonsynonymous","G51D",1
"lib2","SARS-CoV-2","GGGATATTCTAAATAA",8,28.45,9.64,-1.2,0.16,2.02,1.12,0.01,"1 nonsynonymous","F185S",1
"lib2","SARS-CoV-2","GGGATATTCTCGCACG",1,5.22,9.09,-1.75,0.44,1.5,1,0.05,">1 nonsynonymous","T46K K87E S108V",3
"lib2","SARS-CoV-2","GGGATCAAACATGCCC",5,30.01,10.43,-0.41,0.09,2.81,1.22,0,"1 nonsynonymous","Q144V",1
"lib2","SARS-CoV-2","GGGATCACCCGTTTTT",2,28.54,7.18,-3.66,0.26,1.5,1.1,0.02,">1 nonsynonymous","N40I A89G",2
"lib2","SARS-CoV-2","GGGATCAGACAGGTAC",3,26.96,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G51R I72V C102W G174L",4
"lib2","SARS-CoV-2","GGGATCATATGGTAAA",2,0.87,NA,NA,NA,NA,NA,NA,"stop","S45* D98Q S113* E141Q",4
"lib2","SARS-CoV-2","GGGATCCCATATACAG",5,0.07,NA,NA,NA,NA,NA,NA,"stop","A14M C49Q D59R T100* S129G A192K",6
"lib2","SARS-CoV-2","GGGATCCCCAATTGGA",16,4,NA,NA,NA,NA,NA,NA,"stop","A33Y K48* Y91L V103L P133Q Q144T P149Q",7
"lib2","SARS-CoV-2","GGGATCGAGTATTATG",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C A81K F134V V153W",4
"lib2","SARS-CoV-2","GGGATCGATGTTAGGT",2,31.23,10.57,-0.26,0.07,2.94,1,0,"1 nonsynonymous","F44P",1
"lib2","SARS-CoV-2","GGGATCGCATCTAATA",3,37.83,9.02,-1.82,0.18,1.61,1.04,0.01,">1 nonsynonymous","F17L Y35C C61E",3
"lib2","SARS-CoV-2","GGGATCTAAGCTGAAC",11,139.03,10.83,-0.01,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGATCTACAAGTAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* P54Y V77D Y93D I142T P169A",6
"lib2","SARS-CoV-2","GGGATCTTCAAGTGAA",3,51.42,10.19,-0.65,0.06,2.77,1.03,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","GGGATGAACGAAGCAG",9,94.67,10.62,-0.22,0.1,2.79,1.11,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","GGGATGATCAACCGTA",1,34.53,9.88,-0.96,0.11,2.5,1.1,0,"1 nonsynonymous","N107E",1
"lib2","SARS-CoV-2","GGGATGATGAACAACT",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I N107T",2
"lib2","SARS-CoV-2","GGGATGATTGTGTTTC",9,12.83,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3E V103Y C150I Y159R",4
"lib2","SARS-CoV-2","GGGATGCATCGGAACC",3,49.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V65W G116L N130C E141C C158V A192N",6
"lib2","SARS-CoV-2","GGGATGCCTCTCGTCG",4,20.76,10.8,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","V32L",1
"lib2","SARS-CoV-2","GGGATGCGCAAGGTCA",7,244.26,8.53,-2.3,0.08,2.73,1.1,0,">1 nonsynonymous","A81C V115E T170F",3
"lib2","SARS-CoV-2","GGGATGCTGGTATGCG",3,76.03,9.72,-1.12,0.07,2.87,1,0,">1 nonsynonymous","F44V S129R G155E",3
"lib2","SARS-CoV-2","GGGATGGAACACTATA",3,25.46,10.89,0.05,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGATGGAGTAAGGCG",2,57.57,10.25,-0.58,0.06,2.55,1.06,0,">1 nonsynonymous","E76T Q168A L188D",3
"lib2","SARS-CoV-2","GGGATGGATATTGACA",6,4.04,NA,NA,NA,NA,NA,NA,"stop","I2L F12* I28S Y50K Q168T",5
"lib2","SARS-CoV-2","GGGATGGTCAGATTAA",8,40.34,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L5T A14F N40F Y50S L125S",5
"lib2","SARS-CoV-2","GGGATGTAAAAGTTTA",2,17.22,11.02,0.19,0.1,2.98,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGATGTATATACGAT",8,88.09,8.35,-2.48,0.1,2.28,1.11,0,">1 nonsynonymous","S108H N130R",2
"lib2","SARS-CoV-2","GGGATTAACAATTCTC",9,81.3,10.81,-0.03,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGATTAAGTGCGCAT",3,42.79,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6V C49V P82M N120S K132C E154G",6
"lib2","SARS-CoV-2","GGGATTACACCCTTTT",5,5.37,NA,NA,NA,NA,NA,NA,"stop","D34* A42V L131* F160Y",4
"lib2","SARS-CoV-2","GGGATTACAGCTATAG",6,0.2,NA,NA,NA,NA,NA,NA,"stop","A22Q Y35* G86C N110R Y175I",5
"lib2","SARS-CoV-2","GGGATTACTAACCCGA",3,15.99,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6S I28Y P54T C61R D112T Y119C",6
"lib2","SARS-CoV-2","GGGATTCATGCAAATA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","N13* N24C E141R",3
"lib2","SARS-CoV-2","GGGATTCGAAATTGGG",4,46.05,7.98,-2.86,0.16,1.5,1.09,0.01,">1 nonsynonymous","A14Q W106C I138Y",3
"lib2","SARS-CoV-2","GGGATTCGGCATATCT",2,62.19,10.55,-0.29,0.07,2.9,1.07,0,"1 nonsynonymous","N30M",1
"lib2","SARS-CoV-2","GGGATTCTTATACCGT",2,14.59,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L5P D59T A89Y K128W S139Q",5
"lib2","SARS-CoV-2","GGGATTGACCCTTGTA",4,72.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19R Q176S",2
"lib2","SARS-CoV-2","GGGATTGGCGTGGAAC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","G9R R27Q S36P T55* K94F",5
"lib2","SARS-CoV-2","GGGATTTAATTTGATA",14,206.48,9.11,-1.72,0.06,2.11,1.1,0,">1 nonsynonymous","I104S F156Y G196A",3
"lib2","SARS-CoV-2","GGGATTTACAAGTGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9L S19* Y91H",3
"lib2","SARS-CoV-2","GGGATTTCTCGAGTAA",2,27.79,6.13,-4.7,0.62,1.5,1.08,0.02,">1 nonsynonymous","L57S G86M N107C E141R",4
"lib2","SARS-CoV-2","GGGATTTTAAAAACCT",7,29.71,10.92,0.09,0.07,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GGGATTTTAAACGAAC",6,72.94,8.23,-2.61,0.1,2.39,1.07,0,">1 nonsynonymous","C61V S113L",2
"lib2","SARS-CoV-2","GGGATTTTCACTATTA",16,76.56,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68F T170V P191T T201C",4
"lib2","SARS-CoV-2","GGGCAAAAAAATGAAC",3,25.33,6,-4.84,0.69,3,1.14,0,">1 nonsynonymous","G9Q N58L A81N K87Q G174V",5
"lib2","SARS-CoV-2","GGGCAAAATACCATAA",8,21.2,6.19,-4.64,1,1.5,1.09,0.04,">1 nonsynonymous","S41L D59V D98Y V103G",4
"lib2","SARS-CoV-2","GGGCAAACCTTGGCCG",4,42.07,9.47,-1.36,0.11,1.98,1,0,">1 nonsynonymous","Y21N D97Y E141H",3
"lib2","SARS-CoV-2","GGGCAAAGCGCAAGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C31V L60* V103G P169Y L183Q",5
"lib2","SARS-CoV-2","GGGCAAAGCTAGCATC",11,235.13,9.82,-1.02,0.07,2.32,1.01,0,">1 nonsynonymous","D34G I88V",2
"lib2","SARS-CoV-2","GGGCAAATCAAACCCT",10,228.3,10.02,-0.82,0.07,2.53,1.01,0,"1 nonsynonymous","A14Y",1
"lib2","SARS-CoV-2","GGGCAAATGGAATGGA",3,20.82,9.49,-1.34,0.13,2.02,1.07,0.01,">1 nonsynonymous","T15L S129T S139F",3
"lib2","SARS-CoV-2","GGGCAAATTTCGGAGA",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I C61S A67C Y123D R127G I138V Q168M",7
"lib2","SARS-CoV-2","GGGCAACCCGATCCAA",2,57.51,10.1,-0.74,0.07,2.69,1.04,0,">1 nonsynonymous","A33R P149N",2
"lib2","SARS-CoV-2","GGGCAAGACCCAATAA",2,8.19,10.04,-0.8,0.17,2.56,1.18,0.01,">1 nonsynonymous","D34V T55V",2
"lib2","SARS-CoV-2","GGGCAAGCTTTCATAT",16,195.59,10.7,-0.13,0.03,2.94,1.05,0,">1 nonsynonymous","P54R I138H",2
"lib2","SARS-CoV-2","GGGCAAGTCATGAGCA",5,71.54,10.79,-0.04,0.04,3,1.03,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","GGGCAAGTTCCTGTCA",1,14.38,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","N1T G9S K48P Q84L Y93M W106L E141R",7
"lib2","SARS-CoV-2","GGGCAATACTGAGGTT",17,20.11,NA,NA,NA,NA,NA,NA,"stop","L162F Q176*",2
"lib2","SARS-CoV-2","GGGCAATCTATATTAC",3,40.81,6,-4.84,2,2.57,1.15,0.01,">1 nonsynonymous","P82T S113I H189A",3
"lib2","SARS-CoV-2","GGGCAATTATACAAGA",3,0.93,NA,NA,NA,NA,NA,NA,"stop","T3R A14Q T55W I142F G174*",5
"lib2","SARS-CoV-2","GGGCACAAGAATAAAA",5,155.23,10.67,-0.16,0.05,2.9,1.09,0,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","GGGCACACAACACATC",7,28.15,6,-4.84,2,3,1.35,0.01,">1 nonsynonymous","K26E L57F D68N E76M Q84K D98R T140R",7
"lib2","SARS-CoV-2","GGGCACACACAAAAAA",3,25.45,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F99M R127L T148Y P161N",4
"lib2","SARS-CoV-2","GGGCACACGAACCGTA",9,5.39,NA,NA,NA,NA,NA,NA,"stop","D112* L122S",2
"lib2","SARS-CoV-2","GGGCACCACCGTTACT",4,0.49,NA,NA,NA,NA,NA,NA,"stop","N1F A14C A33W N120*",4
"lib2","SARS-CoV-2","GGGCACCTCCAAGATA",6,14.65,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V71N F99L F156R N171I",4
"lib2","SARS-CoV-2","GGGCACGAAATTCTCT",3,0.98,NA,NA,NA,NA,NA,NA,"stop","D90* Y121R P149*",3
"lib2","SARS-CoV-2","GGGCACGACTTTTAAG",10,117.95,10.88,0.04,0.07,2.84,1.09,0,"1 nonsynonymous","S43M",1
"lib2","SARS-CoV-2","GGGCACTCGGCAACTG",9,168.32,10.26,-0.58,0.02,2.89,1.05,0,">1 nonsynonymous","V11W K128S P149S",3
"lib2","SARS-CoV-2","GGGCACTTCAACAAGT",9,216.21,8.34,-2.49,0.09,2.87,1.08,0,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","GGGCACTTCGTATTCC",6,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135S F167N",2
"lib2","SARS-CoV-2","GGGCAGAAGAATATAG",5,1.08,NA,NA,NA,NA,NA,NA,"stop","V71* I104Y L162P",3
"lib2","SARS-CoV-2","GGGCAGAAGTAGAAGG",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F K87F L95R P133L Q176A",5
"lib2","SARS-CoV-2","GGGCAGACACCGGTCC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P7F K114* Y121T",3
"lib2","SARS-CoV-2","GGGCAGATCACGCCGG",3,25.3,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14E S113W R124F",3
"lib2","SARS-CoV-2","GGGCAGCAAGTTACGC",11,4.73,NA,NA,NA,NA,NA,NA,"stop","V103* R127V",2
"lib2","SARS-CoV-2","GGGCAGCAATTCTCAC",4,47.04,10.72,-0.12,0.04,2.91,1.1,0,"1 nonsynonymous","V173G",1
"lib2","SARS-CoV-2","GGGCAGCAGCCAAAAC",3,84.57,9.28,-1.56,0.13,1.88,1.06,0.01,">1 nonsynonymous","R124S P161V",2
"lib2","SARS-CoV-2","GGGCAGGATCGTCCCG",7,29.4,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N13C C61V C150G",3
"lib2","SARS-CoV-2","GGGCAGGTCGGGACCG",2,5.2,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","GGGCAGTAAGATCTAA",4,1.77,NA,NA,NA,NA,NA,NA,"stop","G9R Y35F W106*",3
"lib2","SARS-CoV-2","GGGCAGTTACAGTAAG",4,58.65,10.84,0,0.07,2.87,1.14,0,"1 nonsynonymous","A190S",1
"lib2","SARS-CoV-2","GGGCAGTTGGGTCCGT",2,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91P F99M L122S G152Y",4
"lib2","SARS-CoV-2","GGGCATAATGAAGTCT",3,35.7,10.53,-0.31,0.13,2.81,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGGCATACAAGGGCTC",3,43.49,7.33,-3.51,0.16,1.5,1.11,0.01,">1 nonsynonymous","F17M Y119V L125R",3
"lib2","SARS-CoV-2","GGGCATACATAGCTTA",9,115.31,10.7,-0.14,0.04,2.85,1.06,0,">1 nonsynonymous","A33V K199I",2
"lib2","SARS-CoV-2","GGGCATACTATACAAG",7,138.24,10.86,0.02,0.05,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGCATAGACAACTGA",6,36.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A81T D98N W106S R136Y",4
"lib2","SARS-CoV-2","GGGCATAGGGGAATCC",3,109.71,8.52,-2.32,0.1,2.6,1.09,0,">1 nonsynonymous","C61L R73E",2
"lib2","SARS-CoV-2","GGGCATCGCTAACGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","E76* P133S V181R",3
"lib2","SARS-CoV-2","GGGCATTCGAAAAAAT",6,3,NA,NA,NA,NA,NA,NA,"stop","F8Y D68* I88T K114A",4
"lib2","SARS-CoV-2","GGGCATTGACGCATTA",9,128.9,7.06,-3.78,0.22,1.5,1.06,0.01,">1 nonsynonymous","G86H Y119D",2
"lib2","SARS-CoV-2","GGGCCAAAACCTGAAG",4,7.31,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","A42R R73L F99C V182N",4
"lib2","SARS-CoV-2","GGGCCAAAACGAAAAT",1,40.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28E K48Y",2
"lib2","SARS-CoV-2","GGGCCAAATAACAGTC",2,46.25,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N58D K114M N120H F167R",4
"lib2","SARS-CoV-2","GGGCCAAATACTAATG",3,10.51,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","A105I P133S Q144L A190S",4
"lib2","SARS-CoV-2","GGGCCAAATTAAACCT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3L Y35N N64A G83N Y123*",5
"lib2","SARS-CoV-2","GGGCCAACAAATTCAT",1,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N S45A E141N",3
"lib2","SARS-CoV-2","GGGCCAACTAACATTG",6,64,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","Y39C A89T R136D",3
"lib2","SARS-CoV-2","GGGCCAAGAGCGATAA",8,3.86,NA,NA,NA,NA,NA,NA,"stop","L5N K87*",2
"lib2","SARS-CoV-2","GGGCCAAGATGAACAA",1,25.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y35T D68E A145D F156T",4
"lib2","SARS-CoV-2","GGGCCAAGATTAGGGC",15,171.95,10.84,0.01,0.05,2.88,1.14,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GGGCCAAGCGACAATA",7,81.88,7.92,-2.91,0.37,1.5,1.01,0.05,">1 nonsynonymous","F8N L57A",2
"lib2","SARS-CoV-2","GGGCCAAGGGAGGCCG",4,42.91,10.59,-0.24,0.06,3,1.02,0,"1 nonsynonymous","S184F",1
"lib2","SARS-CoV-2","GGGCCACAATTAAGCC",2,43.88,10.63,-0.2,0.06,2.75,1.18,0,">1 nonsynonymous","I28L Y35L L60Y V173D",4
"lib2","SARS-CoV-2","GGGCCACATTAGAAAG",6,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I L131R S200A",3
"lib2","SARS-CoV-2","GGGCCACGTATCTATG",3,66.19,10.25,-0.59,0.04,2.84,1,0,">1 nonsynonymous","A33I F44P D59G Y66C",4
"lib2","SARS-CoV-2","GGGCCATCAGAACATA",1,26.76,10.81,-0.03,0.04,3,1,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","GGGCCATTTAATGGAA",3,0,NA,NA,NA,NA,NA,NA,"stop","F44V G74* E141T N157Y",4
"lib2","SARS-CoV-2","GGGCCCAAATACAACA",11,104.51,9.59,-1.25,0.03,2.83,1.13,0,">1 nonsynonymous","G9E Y119Q",2
"lib2","SARS-CoV-2","GGGCCCACACTCCTAT",1,2.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S164D",1
"lib2","SARS-CoV-2","GGGCCCATAGATTAGT",2,12.68,6.62,-4.21,0.22,1.5,1.15,0.01,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","GGGCCCATCCACAGCA",6,23.48,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45I D98E T100D K198W",4
"lib2","SARS-CoV-2","GGGCCCATGGAACAAG",2,14.02,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N1A D90T G116S Y123S P149R",5
"lib2","SARS-CoV-2","GGGCCCGAGACATAAG",1,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88E",1
"lib2","SARS-CoV-2","GGGCCGAAGTGGATGC",1,23.25,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S19M Y39V S113D R136L",4
"lib2","SARS-CoV-2","GGGCCGATCTGCACCA",3,49.53,10.8,-0.04,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGCCGCGTCAGGCAT",4,115.36,10.32,-0.51,0.07,2.61,1.05,0,">1 nonsynonymous","T15S Y50H",2
"lib2","SARS-CoV-2","GGGCCGCTAAACGCCA",22,242.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L60P F62C Q79K K114R N120D G146E G155F",7
"lib2","SARS-CoV-2","GGGCCTAAAGACTCTT",3,119.2,10.37,-0.47,0.04,2.98,1.04,0,"1 nonsynonymous","G155E",1
"lib2","SARS-CoV-2","GGGCCTAAGATCTAAC",1,23.87,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","T63L P177R",2
"lib2","SARS-CoV-2","GGGCCTATGCGAAAGT",3,45.63,10.8,-0.04,0.06,2.96,1.06,0,"1 nonsynonymous","K94R",1
"lib2","SARS-CoV-2","GGGCCTTAAAAGGGTG",5,6.72,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1R A14K G101S K114D L122M",5
"lib2","SARS-CoV-2","GGGCCTTTCAAAGACT",1,18.07,6.32,-4.51,0.72,1.5,1.13,0.04,">1 nonsynonymous","T3W K48P Q79F P133S",4
"lib2","SARS-CoV-2","GGGCGAAACAAGGAGA",1,5.54,10.56,-0.28,0.3,3,1.01,0,">1 nonsynonymous","Y35L N110T",2
"lib2","SARS-CoV-2","GGGCGAACACTTTTAA",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P Q176E",2
"lib2","SARS-CoV-2","GGGCGAACGATGAGAT",3,29.28,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y91A D98I Y119V K128W",4
"lib2","SARS-CoV-2","GGGCGACCCGAGGGAA",10,94.16,10.52,-0.32,0.06,3,1.01,0,">1 nonsynonymous","E10D A33N V37A",3
"lib2","SARS-CoV-2","GGGCGAGTGCGATCTG",1,22.12,10.42,-0.42,0.09,2.92,1.12,0,">1 nonsynonymous","R78T D98A",2
"lib2","SARS-CoV-2","GGGCGATACGCGCTGA",4,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N Y50S T100S P133M",4
"lib2","SARS-CoV-2","GGGCGCAACTATAGTA",1,4.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","GGGCGCACGTTACATC",7,207.94,10.43,-0.4,0.04,2.9,1.06,0,">1 nonsynonymous","G83L K128A P149L",3
"lib2","SARS-CoV-2","GGGCGCAGCGGTTGAC",5,21.8,8.25,-2.58,0.26,2.29,1.13,0.02,">1 nonsynonymous","D97I Y119V K128P F160L",4
"lib2","SARS-CoV-2","GGGCGCCACCATCAGG",3,18.1,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G9S K48S A105L",3
"lib2","SARS-CoV-2","GGGCGCCTAGCTTCAA",8,0,NA,NA,NA,NA,NA,NA,"stop","D75W D90G N130G E141*",4
"lib2","SARS-CoV-2","GGGCGCCTATTTGAGG",31,319.02,8.15,-2.68,0.11,1.93,1.06,0,">1 nonsynonymous","Y165C A190H",2
"lib2","SARS-CoV-2","GGGCGCGAGTAGTAAT",8,38.41,10.2,-0.64,0.06,2.9,1.02,0,"1 nonsynonymous","E76W",1
"lib2","SARS-CoV-2","GGGCGCGCAGAATGGT",15,162.32,9.76,-1.08,0.04,2.57,1.08,0,">1 nonsynonymous","I88L K114A",2
"lib2","SARS-CoV-2","GGGCGCGGTACCATTC",9,83.98,10.47,-0.36,0.05,2.85,1.12,0,">1 nonsynonymous","I104W Q144D",2
"lib2","SARS-CoV-2","GGGCGGAAAAAAATAA",14,147.58,10.86,0.02,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGCGGATATTAATTG",9,106.86,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y50I V71E G83H P96K K128S",5
"lib2","SARS-CoV-2","GGGCGGATTTTCGGTA",5,68.11,9.62,-1.21,0.07,2.38,1.05,0,">1 nonsynonymous","L5V I88L L122C",3
"lib2","SARS-CoV-2","GGGCGGCAGAACTTAA",3,19.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R78S V180Y",2
"lib2","SARS-CoV-2","GGGCGGGCAATACGTA",7,120.92,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S43W N64L V77W N157Q",4
"lib2","SARS-CoV-2","GGGCGGGTCCATAACC",9,86.12,6.67,-4.16,0.4,1.5,1.16,0.02,">1 nonsynonymous","Q144I P161T",2
"lib2","SARS-CoV-2","GGGCGGTAGACCCACT",2,19.51,10.82,-0.02,0.32,2.51,1,0.03,"wildtype","",0
"lib2","SARS-CoV-2","GGGCGGTTTTCAAACG",3,27.59,10.82,-0.02,0.07,2.89,1.13,0,"1 nonsynonymous","N171H",1
"lib2","SARS-CoV-2","GGGCGTAATAATACAA",8,150.91,10.82,-0.02,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGCGTATGCGCTCAA",6,91.7,10.74,-0.09,0.03,2.99,1.04,0,"1 nonsynonymous","N40M",1
"lib2","SARS-CoV-2","GGGCGTCCCACAGGAT",3,69.64,9.84,-1,0.05,2.76,1.06,0,">1 nonsynonymous","C6V V11Y",2
"lib2","SARS-CoV-2","GGGCGTCTCTCTAGTA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","Y50S G174*",2
"lib2","SARS-CoV-2","GGGCGTGGGATCCGTT",2,16.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","P82N T140G P149S",3
"lib2","SARS-CoV-2","GGGCTAAAATATTAGA",1,30.45,10.64,-0.2,0.06,3,1,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","GGGCTAAAGCAAAGTG",7,34.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T3W I72K D90Y K94P Y123P Y175C",6
"lib2","SARS-CoV-2","GGGCTAACAACTATTC",2,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D A33T Y50D L60R K132I",5
"lib2","SARS-CoV-2","GGGCTACCTCCCAAGC",8,8.47,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6L Q84F K94M A105R Y143R",5
"lib2","SARS-CoV-2","GGGCTAGCTCAGTCCG",5,39.75,8.95,-1.88,0.15,1.71,1.08,0.01,">1 nonsynonymous","F44L K87A V103T",3
"lib2","SARS-CoV-2","GGGCTAGGTAGGCTCA",4,56.03,10.58,-0.26,0.06,2.99,1.02,0,">1 nonsynonymous","S41L T55F A190L",3
"lib2","SARS-CoV-2","GGGCTATAAGAATTTC",4,79.75,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","V37N N120P C150S P177L",4
"lib2","SARS-CoV-2","GGGCTATATCTAAACA",2,1.19,NA,NA,NA,NA,NA,NA,"stop","S43F L60* S147Y N151S",4
"lib2","SARS-CoV-2","GGGCTATATGACGGCC",4,78.37,9.46,-1.37,0.11,1.97,1.03,0.01,">1 nonsynonymous","A81F S129C",2
"lib2","SARS-CoV-2","GGGCTATGCGCACGCC",5,33.78,9.02,-1.81,0.16,1.72,1.17,0.01,">1 nonsynonymous","A14W E154M",2
"lib2","SARS-CoV-2","GGGCTATGCGGGCAGT",2,39.52,9.41,-1.43,0.1,2.11,1,0,">1 nonsynonymous","P7R S129I R136V K198A",4
"lib2","SARS-CoV-2","GGGCTCAAATCAAGGA",5,125.39,10.52,-0.32,0.04,2.92,1.08,0,"1 nonsynonymous","A67I",1
"lib2","SARS-CoV-2","GGGCTCAGTTACAAAC",3,23.45,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1M C150N F167L",3
"lib2","SARS-CoV-2","GGGCTCGGCGTCCCAT",5,159.8,10.25,-0.59,0.02,2.91,1.02,0,">1 nonsynonymous","N58C G152A V173Q",3
"lib2","SARS-CoV-2","GGGCTGACGGTACATA",26,336.35,10.52,-0.31,0.03,2.9,1.07,0,">1 nonsynonymous","A33L S43Y G152S",3
"lib2","SARS-CoV-2","GGGCTGCAATTACCCG",5,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I Y50T V103G",3
"lib2","SARS-CoV-2","GGGCTGCCGGTTCTAG",4,74.59,10.85,0.01,0.07,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGCTGGGCTCTATAT",5,20.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G51A P82R F99P S139H L162W",5
"lib2","SARS-CoV-2","GGGCTGGGTGCTACTT",10,3.86,NA,NA,NA,NA,NA,NA,"stop","Q84* N120T",2
"lib2","SARS-CoV-2","GGGCTGTGCGACAGGT",10,47.22,8.77,-2.07,0.2,1.54,1.08,0.01,">1 nonsynonymous","K94Y P169R A190H",3
"lib2","SARS-CoV-2","GGGCTTACCTCAGGGT",1,25.49,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G86Y L162K",2
"lib2","SARS-CoV-2","GGGCTTAGAAAGGCCG",2,72.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19T L131A",2
"lib2","SARS-CoV-2","GGGCTTAGGTTGGGTT",11,8.61,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N13V C49D D98R Y121N E141V P161S",6
"lib2","SARS-CoV-2","GGGCTTAGTCCAAAAG",3,12.93,6.46,-4.38,0.57,1.5,1.13,0.03,">1 nonsynonymous","F8V K26Q C150V",3
"lib2","SARS-CoV-2","GGGCTTATACCCTACT",4,30.91,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","P82Y C150F",2
"lib2","SARS-CoV-2","GGGCTTCTGATTCACT",1,32.96,6.98,-3.86,0.31,1.5,1.09,0.02,">1 nonsynonymous","F99L Y159V",2
"lib2","SARS-CoV-2","GGGCTTGAAGGATTGC",1,0,NA,NA,NA,NA,NA,NA,"stop","I88* F99I G116L C195V",4
"lib2","SARS-CoV-2","GGGCTTGTTCATGAGA",2,50.23,7.62,-3.22,0.09,1.88,1.08,0,"1 nonsynonymous","Q176Y",1
"lib2","SARS-CoV-2","GGGCTTTAGAGAATGT",7,141.48,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F17T G83N L95P",3
"lib2","SARS-CoV-2","GGGCTTTGGCATGCAA",17,11.48,NA,NA,NA,NA,NA,NA,"stop","I72M G83L F99*",3
"lib2","SARS-CoV-2","GGGGAAAATAATTTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L L95N N120S",3
"lib2","SARS-CoV-2","GGGGAAAGCGCGGCAA",8,54.45,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R25I A42D K87H Y143N",4
"lib2","SARS-CoV-2","GGGGAAAGGTTGTAGC",2,38,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N58V A67C G101V",3
"lib2","SARS-CoV-2","GGGGAACAAATAGATA",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A A33N G51A T85A D98T",5
"lib2","SARS-CoV-2","GGGGAACAATGAGAGC",2,16.72,9.92,-0.92,0.14,2.84,1.03,0.01,">1 nonsynonymous","T85L G152E",2
"lib2","SARS-CoV-2","GGGGAACTCAATATTT",2,63.51,10.83,-0.01,0.06,3,1.03,0,">1 nonsynonymous","T85K P149Q A190Y P197R",4
"lib2","SARS-CoV-2","GGGGAAGATCCTAAAG",1,16.81,10.57,-0.26,0.1,2.88,1.09,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","GGGGAAGGACACTTGT",5,27.24,7.82,-3.01,0.27,1.5,1,0.03,">1 nonsynonymous","G9L F44L R136E T148V",4
"lib2","SARS-CoV-2","GGGGAAGGGTGGTATC",1,11.96,9.27,-1.57,0.13,2.22,1.01,0.01,">1 nonsynonymous","V181C P191C",2
"lib2","SARS-CoV-2","GGGGAAGTCGTACTTA",3,11.83,8.55,-2.28,0.3,1.51,1.24,0.04,"1 nonsynonymous","R127D",1
"lib2","SARS-CoV-2","GGGGAATTTATATTGA",4,11.81,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C6S G86V N107P",3
"lib2","SARS-CoV-2","GGGGACAAACCCGGGC",2,11.7,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","T15C L38P Y91S F99Y P149L",5
"lib2","SARS-CoV-2","GGGGACACTAGCTTGT",3,72.64,10.78,-0.06,0.03,3,1.02,0,"1 nonsynonymous","P7A",1
"lib2","SARS-CoV-2","GGGGACAGCGATATTT",8,66.78,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G86I L122S Q144L",3
"lib2","SARS-CoV-2","GGGGACCACTTTACAG",5,220,9.18,-1.66,0.06,2.86,1.08,0,">1 nonsynonymous","P149L E154F",2
"lib2","SARS-CoV-2","GGGGACCCTAATAGTT",4,12.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","GGGGACTAAGCTACTG",5,3.38,NA,NA,NA,NA,NA,NA,"stop","G86* F99C G166P",3
"lib2","SARS-CoV-2","GGGGACTTCCAAAAAA",1,8.74,9.25,-1.58,0.17,1.74,1.09,0.02,">1 nonsynonymous","S36H G83F Y123S Q144V K199N",5
"lib2","SARS-CoV-2","GGGGACTTCTGCAGAG",18,239.23,10.9,0.06,0.05,2.94,1.07,0,"1 nonsynonymous","H189S",1
"lib2","SARS-CoV-2","GGGGAGAACTCCTTAA",8,85.97,10.36,-0.48,0.05,2.89,1.1,0,">1 nonsynonymous","Y39F F156L",2
"lib2","SARS-CoV-2","GGGGAGAGAAACACGA",9,70.65,9.78,-1.05,0.11,2.3,1.06,0.01,">1 nonsynonymous","V32I S41T K48M Y91H",4
"lib2","SARS-CoV-2","GGGGAGAGATGTGAAA",8,97.16,10.54,-0.3,0.06,2.83,1.08,0,">1 nonsynonymous","V37M Q144R V153F",3
"lib2","SARS-CoV-2","GGGGAGATAAAACTGC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","W23* G51Y",2
"lib2","SARS-CoV-2","GGGGAGCACCCCAGAA",2,43.03,10.49,-0.35,0.03,2.92,1.02,0,">1 nonsynonymous","S36C S200L",2
"lib2","SARS-CoV-2","GGGGAGCGAAAAGGTT",6,14.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90A E141V V182F",3
"lib2","SARS-CoV-2","GGGGAGCTCGCTACCC",2,21.97,10.69,-0.15,0.06,2.88,1.1,0,">1 nonsynonymous","L111R V173M",2
"lib2","SARS-CoV-2","GGGGAGTAGACCCGCA",8,34.58,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F8G R16A V37I F99Y N157S",5
"lib2","SARS-CoV-2","GGGGAGTTAACAACAG",2,22.59,10.63,-0.21,0.09,2.84,1.16,0,">1 nonsynonymous","E76Q V115A",2
"lib2","SARS-CoV-2","GGGGATAAAACATTAA",14,0.53,NA,NA,NA,NA,NA,NA,"stop","N1S I88A F99*",3
"lib2","SARS-CoV-2","GGGGATAAATTTATGT",1,27.98,6.78,-4.06,0.45,1.5,1.07,0.03,">1 nonsynonymous","C61T A145F C150V",3
"lib2","SARS-CoV-2","GGGGATACTAGCATTG",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55S S108F K199C",3
"lib2","SARS-CoV-2","GGGGATAGAATGACTT",3,31.18,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T63M D75R V103L L122S",4
"lib2","SARS-CoV-2","GGGGATATTAGAAATG",1,0.51,NA,NA,NA,NA,NA,NA,"stop","S41P K94Q F99N S108P K114* Q176L",6
"lib2","SARS-CoV-2","GGGGATCATCACGCGG",6,1.59,NA,NA,NA,NA,NA,NA,"stop","R27S S36L G166* L183F",4
"lib2","SARS-CoV-2","GGGGATCCCTAACATT",11,90.62,6,-4.84,1.02,1.5,1.13,0,">1 nonsynonymous","Y119L G146V",2
"lib2","SARS-CoV-2","GGGGATGGTTTCTGAC",1,6.52,9.43,-1.4,0.26,1.71,1.02,0.03,">1 nonsynonymous","P96S A105Y",2
"lib2","SARS-CoV-2","GGGGATGTTAAGCATA",1,20.84,9.23,-1.6,0.15,1.57,1.07,0.01,">1 nonsynonymous","Q84L A105I",2
"lib2","SARS-CoV-2","GGGGATTAAGTAACAC",1,21.36,6.15,-4.69,1.05,1.5,1.11,0.03,">1 nonsynonymous","N64I L183R",2
"lib2","SARS-CoV-2","GGGGATTACATGAGGT",1,47.43,10.99,0.15,0.04,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGCAAACCGTATAA",19,3.07,NA,NA,NA,NA,NA,NA,"stop","S41A F99Q I104T C150H Q163*",5
"lib2","SARS-CoV-2","GGGGCAAAGAGAATTA",2,25.67,10.59,-0.25,0.03,2.93,1.07,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","GGGGCAAAGTTAGGCA",3,77.98,10.38,-0.46,0.04,2.97,1.04,0,">1 nonsynonymous","L5G C61I T85N T201S",4
"lib2","SARS-CoV-2","GGGGCAACCAATTTCA",1,10.11,9.48,-1.36,0.22,1.92,1.07,0.03,">1 nonsynonymous","S41V E135R P149S N171S",4
"lib2","SARS-CoV-2","GGGGCAATGTTCTAGT",9,63.47,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","C6D G172N Y178K A190E",4
"lib2","SARS-CoV-2","GGGGCAATTAAGTAGA",4,0.72,NA,NA,NA,NA,NA,NA,"stop","F8* L38N D98T G155P",4
"lib2","SARS-CoV-2","GGGGCAATTGCAATCA",5,100.14,9.9,-0.94,0.04,2.92,1.04,0,">1 nonsynonymous","E10T R27V G166S",3
"lib2","SARS-CoV-2","GGGGCACCAAATAAAC",8,6.12,NA,NA,NA,NA,NA,NA,"stop","L5V Y35H K48Y N64* P96R D112A T201Q",7
"lib2","SARS-CoV-2","GGGGCACTGCTGCAAG",5,90.65,10.28,-0.55,0.04,2.88,1.07,0,">1 nonsynonymous","F44I G83Y T100K",3
"lib2","SARS-CoV-2","GGGGCAGAAGCACGCA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F L38C K114E E141T S147T G174S",6
"lib2","SARS-CoV-2","GGGGCAGGTATGATAA",10,1896.14,10.67,-0.16,0.02,2.98,1.03,0,"1 nonsynonymous","C61D",1
"lib2","SARS-CoV-2","GGGGCAGTCCAATGAA",13,258.95,8.83,-2.01,0.05,2.93,1.11,0,"1 nonsynonymous","G166Y",1
"lib2","SARS-CoV-2","GGGGCATAGCTTTTTT",8,2.19,NA,NA,NA,NA,NA,NA,"stop","F44L Q84P I88M C158Q Q176*",5
"lib2","SARS-CoV-2","GGGGCATGATATGTCG",1,1.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P D90S K94S",3
"lib2","SARS-CoV-2","GGGGCCAGACGCCAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14H I28L Y35* N58W Y93* K114V",6
"lib2","SARS-CoV-2","GGGGCCAGTATATCAA",1,19.55,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","W23K D34L G166R",3
"lib2","SARS-CoV-2","GGGGCCATTAAAAATT",8,100.29,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y39V L60H D68R F99V Q163T",5
"lib2","SARS-CoV-2","GGGGCCCAAACCTTCA",3,19.11,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S45M K87Q V103N L122Q",4
"lib2","SARS-CoV-2","GGGGCCGTCCGTGGCT",15,344.14,9.59,-1.25,0.03,2.95,1.06,0,">1 nonsynonymous","T55A N64A Y143I",3
"lib2","SARS-CoV-2","GGGGCCTTACCCGTTG",4,0.43,NA,NA,NA,NA,NA,NA,"stop","F44A S139N V173* V181R",4
"lib2","SARS-CoV-2","GGGGCGAGCCCAACGT",14,149.05,10.71,-0.12,0.04,2.98,1.05,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","GGGGCGATTATAATGG",1,29.43,10.63,-0.21,0.04,2.97,1.02,0,">1 nonsynonymous","F126L Q144E",2
"lib2","SARS-CoV-2","GGGGCGCGAGGCACTT",6,2.65,NA,NA,NA,NA,NA,NA,"stop","S45T K87V L122R Y143* Q163S T170H",6
"lib2","SARS-CoV-2","GGGGCGGTAAATTGAC",5,32.64,8.74,-2.09,0.31,1.5,1,0.04,">1 nonsynonymous","C61T V115Y V181F",3
"lib2","SARS-CoV-2","GGGGCGGTGCACACTT",1,15.38,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","L5R S36N I88Q Q144S G174A",5
"lib2","SARS-CoV-2","GGGGCGTTAAAAACCC",13,107.25,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38R S43Q F99L E186H",4
"lib2","SARS-CoV-2","GGGGCTACACAAAATT",1,9.38,10.54,-0.29,0.07,3,1.01,0,">1 nonsynonymous","Y35V V173G",2
"lib2","SARS-CoV-2","GGGGCTACGTATAACA",3,66.96,8.27,-2.56,0.41,1.5,1,0.05,">1 nonsynonymous","V11N R16I N64H N120V",4
"lib2","SARS-CoV-2","GGGGCTACGTCTAGAG",19,1.82,NA,NA,NA,NA,NA,NA,"stop","G9T N151*",2
"lib2","SARS-CoV-2","GGGGCTAGGGATCGAA",3,46.94,9.53,-1.31,0.09,2.2,1.01,0,">1 nonsynonymous","K94S G155S L187Q",3
"lib2","SARS-CoV-2","GGGGCTATACTGGACT",2,32.87,7.74,-3.09,0.17,1.5,1.06,0.01,">1 nonsynonymous","Y35E R78L Q168I T201D",4
"lib2","SARS-CoV-2","GGGGCTATGATAGGAT",9,209.66,10.68,-0.16,0.03,2.98,1.02,0,">1 nonsynonymous","T55S L162V",2
"lib2","SARS-CoV-2","GGGGCTATTCCAGTCT",2,1.33,NA,NA,NA,NA,NA,NA,"stop","A14* N40L I72F P82I",4
"lib2","SARS-CoV-2","GGGGCTCAATATTTGA",9,171.57,10.83,0,0.06,2.93,1.07,0,"1 nonsynonymous","N64E",1
"lib2","SARS-CoV-2","GGGGCTTAAGCTACAC",5,26.85,9.37,-1.47,0.14,1.68,1.01,0.01,">1 nonsynonymous","T3E G9V T46Y F134L T140P",5
"lib2","SARS-CoV-2","GGGGCTTACAGCATCA",2,34.78,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V37H Y93A R136G L188K",4
"lib2","SARS-CoV-2","GGGGCTTCTTACGAGC",4,76.61,6,-4.84,2,3,1.21,0,">1 nonsynonymous","P82K N157R",2
"lib2","SARS-CoV-2","GGGGGAAAGACCCATA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","W23A F44* V115R F160S",4
"lib2","SARS-CoV-2","GGGGGAAAGATCAATA",6,123.4,10.86,0.02,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGGAAATTACTCAC",6,60.99,8.9,-1.93,0.16,1.61,1.03,0.01,">1 nonsynonymous","P54K N109C E141H V181M",4
"lib2","SARS-CoV-2","GGGGGAATCAACATTG",12,96.74,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T55R R73W P96L V103L L162A",5
"lib2","SARS-CoV-2","GGGGGACGCCACCCAC",4,24.09,6.29,-4.55,0.6,1.5,1.13,0.01,">1 nonsynonymous","T3Y I88A Y119R",3
"lib2","SARS-CoV-2","GGGGGAGCCACCAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","C61L N107S N171S K199*",4
"lib2","SARS-CoV-2","GGGGGATGCGTTTCCT",5,46,6,-4.84,1.52,1.5,1.23,0.05,">1 nonsynonymous","L95Y F156L F167W",3
"lib2","SARS-CoV-2","GGGGGCAGCCATTAAA",1,10.9,10.53,-0.31,0.07,2.96,1,0,">1 nonsynonymous","A33P L131V",2
"lib2","SARS-CoV-2","GGGGGCATGTCCTATG",18,194.32,10.88,0.05,0.07,2.88,1.14,0,"1 nonsynonymous","S147P",1
"lib2","SARS-CoV-2","GGGGGCCTCTAACTGG",3,64.06,10.87,0.04,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGGCGAAAAATCAA",3,22.8,10.78,-0.06,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGGGAAAGAAAACA",8,52.24,10.94,0.1,0.05,2.97,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","GGGGGGAATGTTATAC",5,0.02,NA,NA,NA,NA,NA,NA,"stop","I2M A22E Y35R N64L I72* Y119R",6
"lib2","SARS-CoV-2","GGGGGGCGTACGCAAA",1,3.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","GGGGGGCTTTAAATTA",4,55.13,10.77,-0.07,0.05,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GGGGGGGGGTCTGCAA",1,61.41,10.7,-0.14,0.03,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGGGGGTAAAAGAA",2,10.21,6.14,-4.69,0.58,1.5,1.16,0.02,">1 nonsynonymous","Y35H C49Q",2
"lib2","SARS-CoV-2","GGGGGTCGTTAATTGC",5,81.01,6,-4.84,1.66,1.5,1.15,0.01,">1 nonsynonymous","A105W Y123T G146T P191N",4
"lib2","SARS-CoV-2","GGGGGTGCGTCAGAAG",5,52.57,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10Q Y50V V103L",3
"lib2","SARS-CoV-2","GGGGGTTAAATTAGAA",1,38.41,10.84,0,0.09,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGTAAAGGTACAAT",2,27.61,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y91S N107T L122M N157Y",4
"lib2","SARS-CoV-2","GGGGTAAATACCTTAA",2,61.03,10.03,-0.81,0.04,2.95,1.06,0,">1 nonsynonymous","C61E D98S E154N G174N",4
"lib2","SARS-CoV-2","GGGGTAACAAACCGAA",10,0.87,NA,NA,NA,NA,NA,NA,"stop","T3V F99* W106A Y119N F134S",5
"lib2","SARS-CoV-2","GGGGTAATATACACTA",4,22.18,10.89,0.05,0.09,2.82,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGTAATTAGACACA",3,56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T63S L95R",2
"lib2","SARS-CoV-2","GGGGTACGTTGTTCAA",2,28.35,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","Y39L C61K Y91T N110I N120D T170L",6
"lib2","SARS-CoV-2","GGGGTAGATCGCTTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M T55Y N64I",3
"lib2","SARS-CoV-2","GGGGTAGCAAGACCCC",1,54.24,9.33,-1.51,0.07,2.7,1.05,0,">1 nonsynonymous","C6S Y39R K87I P96S H189E",5
"lib2","SARS-CoV-2","GGGGTATACACGACCA",8,206.54,9.71,-1.13,0.06,2.7,1.05,0,">1 nonsynonymous","C61R N107K P197Q",3
"lib2","SARS-CoV-2","GGGGTATATATGCAGG",1,29.7,8.22,-2.62,0.12,2.71,1.08,0.01,">1 nonsynonymous","T63V I142D",2
"lib2","SARS-CoV-2","GGGGTATCCAGTGCGT",2,27.65,10.73,-0.11,0.03,2.92,1.1,0,"1 nonsynonymous","R136Q",1
"lib2","SARS-CoV-2","GGGGTATTAAATCAAG",3,50.28,10.72,-0.12,0.03,2.99,1.01,0,">1 nonsynonymous","G9V A42H",2
"lib2","SARS-CoV-2","GGGGTCAACAAATGTT",5,34.72,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V20Q P54V L57G A81H V115S",5
"lib2","SARS-CoV-2","GGGGTCAGTGAATGCC",13,257.76,7.73,-3.11,0.09,2.24,1.13,0,"1 nonsynonymous","Y175D",1
"lib2","SARS-CoV-2","GGGGTCCAAACTCATA",8,59.18,6.55,-4.28,0.43,1.5,1.14,0.02,">1 nonsynonymous","R136F Y165V",2
"lib2","SARS-CoV-2","GGGGTCCATCAGGTGG",12,274.01,10.84,0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGGTCTAGGTAATTT",8,107.09,9.29,-1.55,0.07,2.86,1.08,0,">1 nonsynonymous","R73L K87V",2
"lib2","SARS-CoV-2","GGGGTGAAATGCGTAA",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44V N64S Y119A",3
"lib2","SARS-CoV-2","GGGGTGATAAAGTGCG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T46Y Y119D K132* E141R",4
"lib2","SARS-CoV-2","GGGGTGATCACCGTTG",7,139.33,10.32,-0.52,0.03,2.92,1.05,0,"1 nonsynonymous","G155H",1
"lib2","SARS-CoV-2","GGGGTGCACCGTAGAT",3,31.66,9.36,-1.48,0.04,2.95,1.06,0,">1 nonsynonymous","Q84M Y119S E141T",3
"lib2","SARS-CoV-2","GGGGTGCTAAAACGCA",4,20.16,10.88,0.04,0.06,2.9,1.1,0,">1 nonsynonymous","V173Y E186D",2
"lib2","SARS-CoV-2","GGGGTGGTGATTGTAG",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A190N",2
"lib2","SARS-CoV-2","GGGGTGGTTATCTCAT",6,2.17,NA,NA,NA,NA,NA,NA,"stop","A33C G117* P149K",3
"lib2","SARS-CoV-2","GGGGTGTAAAAATGGC",5,0,NA,NA,NA,NA,NA,NA,"stop","G9D G146*",2
"lib2","SARS-CoV-2","GGGGTGTCGACTCAAA",1,80.2,10.97,0.14,0.06,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GGGGTTAAATTTCTTT",2,13.36,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","GGGGTTAGCCCTTAAG",4,99.93,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G51C L95M Y121M",3
"lib2","SARS-CoV-2","GGGGTTAGTCTGGTAA",5,0.24,NA,NA,NA,NA,NA,NA,"stop","N1* C49N T148M F167L",4
"lib2","SARS-CoV-2","GGGGTTATATTTATGG",3,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20Q R27G V103T Q168Y",4
"lib2","SARS-CoV-2","GGGGTTCAGTATGTCT",1,16.95,10.3,-0.54,0.13,2.92,1,0.01,">1 nonsynonymous","A42R A105M",2
"lib2","SARS-CoV-2","GGGGTTCCGACATAAC",14,27.28,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14M S41C W106P",3
"lib2","SARS-CoV-2","GGGGTTCGACAACGTT",2,1.47,NA,NA,NA,NA,NA,NA,"stop","F17R V115* Y143V",3
"lib2","SARS-CoV-2","GGGGTTGAATCAATAG",4,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A D68R F99Q C150I C158R G172K T201H",7
"lib2","SARS-CoV-2","GGGGTTTATACGAAAA",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17T P149L G152V",3
"lib2","SARS-CoV-2","GGGGTTTCCAAAAGTA",2,41.15,10.12,-0.71,0.1,2.69,1.03,0,">1 nonsynonymous","A14S S43V D59V",3
"lib2","SARS-CoV-2","GGGGTTTTAGCTTAAT",10,25.08,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P96R V103A N120P S139L",4
"lib2","SARS-CoV-2","GGGTAAAAAGAATGAT",7,29.94,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E76F R127F Y159S",3
"lib2","SARS-CoV-2","GGGTAAAAGAGTTATA",1,55.49,8.67,-2.16,0.08,2.89,1.07,0,">1 nonsynonymous","T15V G166K T201N",3
"lib2","SARS-CoV-2","GGGTAAACCACTACAA",5,0.36,NA,NA,NA,NA,NA,NA,"stop","T3F A42* Y91A",3
"lib2","SARS-CoV-2","GGGTAAACGTGGAGCG",8,66.25,8.05,-2.78,0.12,2.23,1.08,0.01,">1 nonsynonymous","G146K P169V",2
"lib2","SARS-CoV-2","GGGTAAAGAAAATAAT",4,68.11,6,-4.84,0.71,1.5,1.16,0.01,">1 nonsynonymous","P7N S43W Y66S N107T N151T",5
"lib2","SARS-CoV-2","GGGTAACAAAAGGGGA",5,79.45,9.48,-1.35,0.04,2.9,1.07,0,">1 nonsynonymous","I2D I88V Y119F",3
"lib2","SARS-CoV-2","GGGTAACAAAGTAGAC",8,149.59,8.43,-2.4,0.1,2.57,1.11,0,"1 nonsynonymous","G146I",1
"lib2","SARS-CoV-2","GGGTAACACCTGGGGA",4,50.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44Y G86V T100S K198P",4
"lib2","SARS-CoV-2","GGGTAACCCTACGACA",2,6.15,6,-4.84,2,3,1.02,0,">1 nonsynonymous","V11I R25K T55I A105V T201L",5
"lib2","SARS-CoV-2","GGGTAACGCTTCTTAT",2,14.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8E L122I Y175K",3
"lib2","SARS-CoV-2","GGGTAACGGTATCACG",9,140.07,6,-4.84,0.71,1.5,1.14,0,">1 nonsynonymous","F17R F44N Y91V Y121F",4
"lib2","SARS-CoV-2","GGGTAACTAAAAAGTA",2,2.08,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63M",1
"lib2","SARS-CoV-2","GGGTAAGCGATTAAAA",3,18.07,9.51,-1.32,0.26,1.6,1.14,0.03,">1 nonsynonymous","L5G A67T E135S",3
"lib2","SARS-CoV-2","GGGTAAGGTTCGCATG",1,2.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","GGGTAATATAATAAGG",3,112.89,10.46,-0.37,0.04,2.9,1.08,0,">1 nonsynonymous","D97L G116W",2
"lib2","SARS-CoV-2","GGGTAATATTATAATC",7,0.83,NA,NA,NA,NA,NA,NA,"stop","L5N D90* N120A V173S",4
"lib2","SARS-CoV-2","GGGTAATCGAGAATAT",4,78.1,10.01,-0.82,0.05,2.9,1.05,0,">1 nonsynonymous","C61Y L122T F160D P169T",4
"lib2","SARS-CoV-2","GGGTAATCGGTAACAG",15,235.34,9.4,-1.44,0.06,2.58,1.08,0,">1 nonsynonymous","S41L N110I Y143L",3
"lib2","SARS-CoV-2","GGGTAATTAAAGTGCA",1,1.04,NA,NA,NA,NA,NA,NA,"stop","I2Y F99*",2
"lib2","SARS-CoV-2","GGGTACAATGTGTGTA",8,71.07,10.77,-0.07,0.02,2.99,1.03,0,"1 nonsynonymous","V153D",1
"lib2","SARS-CoV-2","GGGTACACGACTTAAA",6,82.23,10.63,-0.21,0.03,2.96,1.04,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GGGTACATCAACGAGC",1,18.44,8.6,-2.24,0.1,2.86,1.01,0,">1 nonsynonymous","C6S A145K",2
"lib2","SARS-CoV-2","GGGTACCACTAATTCT",8,144.34,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T55L D98K A105T D112R P133G E154V",6
"lib2","SARS-CoV-2","GGGTACCCTCTAGGTA",3,57.46,10.83,0,0.04,2.96,1.06,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","GGGTACCTCAACACTA",4,38.53,6.21,-4.63,0.58,1.5,1.2,0.01,"1 nonsynonymous","N92R",1
"lib2","SARS-CoV-2","GGGTACGGCTGCTAAC",8,140,10.81,-0.02,0.06,2.89,1.12,0,"1 nonsynonymous","F134H",1
"lib2","SARS-CoV-2","GGGTACTCGACATCTG",5,27.97,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L95S F167L",2
"lib2","SARS-CoV-2","GGGTACTTAGACATAC",1,10.94,6.54,-4.29,0.68,3,1.41,0.01,">1 nonsynonymous","C49M F62R G83R E141Y",4
"lib2","SARS-CoV-2","GGGTAGAACGCTGAGG",10,137.54,8.73,-2.1,0.06,2.77,1.09,0,">1 nonsynonymous","R16V S113K",2
"lib2","SARS-CoV-2","GGGTAGAGCCCATTTA",6,91.75,10.11,-0.73,0.08,2.34,1.03,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","GGGTAGAGTATTTGAG",5,125.05,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N40L I104E L122S F167D",4
"lib2","SARS-CoV-2","GGGTAGAGTGAGCAGC",4,9.26,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W106G L122E F185R",3
"lib2","SARS-CoV-2","GGGTAGATTTAAATGC",1,11.55,10.94,0.1,0.1,3,1.03,0,"1 nonsynonymous","P191S",1
"lib2","SARS-CoV-2","GGGTAGCAACTACGGA",2,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F L57C T85K Q168S",4
"lib2","SARS-CoV-2","GGGTAGCCACGCTGAC",5,69.16,10.81,-0.03,0.05,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTAGCCCCATAAAA",4,82.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35L L125K P133D Y165C Y175L",5
"lib2","SARS-CoV-2","GGGTAGCTAAATTATT",3,13.06,10.48,-0.36,0.08,2.96,1.08,0,">1 nonsynonymous","N40G H189Y",2
"lib2","SARS-CoV-2","GGGTAGGACTCAAACA",15,160.3,10.85,0.01,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTAGGGGGTATAAT",1,10.54,10.04,-0.79,0.09,2.69,1.31,0.01,">1 nonsynonymous","V37C G83N I138R S184C",4
"lib2","SARS-CoV-2","GGGTAGGTGCCCAAAT",13,277.85,10.14,-0.7,0.03,2.92,1.09,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","GGGTATAAAAAATAGT",4,127.98,10.59,-0.25,0.04,2.85,1.12,0,">1 nonsynonymous","G116Q S200T",2
"lib2","SARS-CoV-2","GGGTATAAATTCCCTA",1,28.69,6,-4.84,2,1.5,1.38,0.05,">1 nonsynonymous","R25C N64Y D112L",3
"lib2","SARS-CoV-2","GGGTATAACACAAAAC",1,22.78,10.61,-0.23,0.23,2.59,1.11,0.02,"wildtype","",0
"lib2","SARS-CoV-2","GGGTATAAGCTTGGTA",3,31.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N24V E141T R179C",3
"lib2","SARS-CoV-2","GGGTATAATGTTTTAT",1,89.47,8.73,-2.11,0.09,2.18,1.1,0,">1 nonsynonymous","T63Y Q176L",2
"lib2","SARS-CoV-2","GGGTATACCGCGTACA",1,52.14,8.43,-2.41,0.21,1.5,1.04,0.02,">1 nonsynonymous","V37A S41C N64Y L183C P197S",5
"lib2","SARS-CoV-2","GGGTATAGAGAAGAAA",3,18.03,10.82,-0.01,0.06,2.86,1.16,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","GGGTATATCCTAACCA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","C6* K56* G152R Q176R",4
"lib2","SARS-CoV-2","GGGTATATTCCTTCCA",7,136.43,10.72,-0.12,0.04,2.9,1.1,0,">1 nonsynonymous","S41Y T140S",2
"lib2","SARS-CoV-2","GGGTATCCATGTAGGG",1,6.5,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K48D Y66C F70K K87N",4
"lib2","SARS-CoV-2","GGGTATCTGATCTACG",1,24.28,10.98,0.15,0.13,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTATGAAATCAACG",2,32.62,10.88,0.04,0.07,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GGGTATTATCTTCTTT",11,208.63,9.04,-1.8,0.05,2.77,1.1,0,">1 nonsynonymous","L60T S164D K198Y",3
"lib2","SARS-CoV-2","GGGTATTCCATCTGCT",1,3.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T S53A A105F K198G",4
"lib2","SARS-CoV-2","GGGTATTTGTGGTTGT",5,75.37,10.59,-0.25,0.07,2.84,1.07,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","GGGTCAAGGTCTTATC",4,200.91,10.85,0.01,0.05,2.94,1.08,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","GGGTCACAAATTTAGA",9,61.31,6.14,-4.69,1.17,1.5,1.24,0.03,">1 nonsynonymous","S69Q A81F",2
"lib2","SARS-CoV-2","GGGTCACCACCCTGGG",3,2.13,NA,NA,NA,NA,NA,NA,"stop","R27* T46L F99S Y143L",4
"lib2","SARS-CoV-2","GGGTCACTACTTGAAT",4,59.48,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R16G G83R G101F G174R",4
"lib2","SARS-CoV-2","GGGTCAGACAGAGCAT",11,310.15,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","V32C Y121R P177N",3
"lib2","SARS-CoV-2","GGGTCAGACTACGAGT",7,52.72,8.98,-1.85,0.07,1.91,1.14,0,">1 nonsynonymous","F99V F160R G174L",3
"lib2","SARS-CoV-2","GGGTCATAATAATTTC",1,19.91,6,-4.84,1.03,1.5,1.17,0.02,">1 nonsynonymous","A33Q C61A G74C R179M",4
"lib2","SARS-CoV-2","GGGTCATACAGAATCA",9,172.44,8.96,-1.88,0.07,2.1,1.07,0,">1 nonsynonymous","K56T K87V K94L I104M",4
"lib2","SARS-CoV-2","GGGTCATACGAAGTAG",11,2.68,NA,NA,NA,NA,NA,NA,"stop","C6F T100* W106V P133H",4
"lib2","SARS-CoV-2","GGGTCATATCTAACGT",2,25.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y66L V103S",2
"lib2","SARS-CoV-2","GGGTCATCACGGACAT",1,7.85,10.43,-0.41,0.15,2.9,1,0.01,">1 nonsynonymous","L5P R136T",2
"lib2","SARS-CoV-2","GGGTCCAAGATGAGAA",1,11.83,9.64,-1.2,0.07,2.81,1.1,0,">1 nonsynonymous","F44Y K56L N120S Q168T",4
"lib2","SARS-CoV-2","GGGTCCAGCTGGATCA",13,128.1,10.71,-0.12,0.04,2.95,1.05,0,"1 nonsynonymous","K132F",1
"lib2","SARS-CoV-2","GGGTCCATCTATAGCT",1,60.27,9.76,-1.08,0.09,2.52,1.04,0,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","GGGTCCCCCAATTTCA",4,25.7,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","S139I Q176Y F185D",3
"lib2","SARS-CoV-2","GGGTCCCGTTAGTCTT",1,0.58,NA,NA,NA,NA,NA,NA,"stop","D34R G51S Y91* P133A P149T",5
"lib2","SARS-CoV-2","GGGTCCGTAGCTCAAT",4,144.53,10.55,-0.29,0.05,2.89,1.09,0,"1 nonsynonymous","Y178N",1
"lib2","SARS-CoV-2","GGGTCCTCAGCAAGCT",5,42.98,9.86,-0.97,0.13,2.35,1.08,0.01,">1 nonsynonymous","V77A T201M",2
"lib2","SARS-CoV-2","GGGTCGAATATGAGCC",7,92.08,9.81,-1.02,0.06,2.26,1.03,0,">1 nonsynonymous","E10A E135W F160S",3
"lib2","SARS-CoV-2","GGGTCGAGGGATACGC",7,155.18,10.8,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTCGATTGAACTGT",9,0.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106F",1
"lib2","SARS-CoV-2","GGGTCGCAGTAATCTC",5,37.55,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14S S43G F167I",3
"lib2","SARS-CoV-2","GGGTCGCGTGTACTTA",1,26.89,9.12,-1.72,0.33,1.52,1.06,0.04,">1 nonsynonymous","F12V K56L A89V",3
"lib2","SARS-CoV-2","GGGTCGGGCCTCGAAA",16,87.73,10.55,-0.28,0.03,2.9,1.1,0,">1 nonsynonymous","D97V K128M",2
"lib2","SARS-CoV-2","GGGTCGTTTTATATCT",1,0.79,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22K",1
"lib2","SARS-CoV-2","GGGTCTAAAAGACCAG",8,138.07,8.75,-2.09,0.06,2.36,1.05,0,">1 nonsynonymous","T15Y Y39T A105W F156S",4
"lib2","SARS-CoV-2","GGGTCTAACAGAACCA",1,0.73,NA,NA,NA,NA,NA,NA,"stop","F8E K26* T63N V103E",4
"lib2","SARS-CoV-2","GGGTCTAGAACTTAAA",1,95.39,10.82,-0.01,0.05,2.96,1.05,0,">1 nonsynonymous","L5V T55Y",2
"lib2","SARS-CoV-2","GGGTCTCCTTGTTCAG",2,15.86,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","R27I D112E L131E Q144I",4
"lib2","SARS-CoV-2","GGGTCTGTACCTGACC",16,211.59,10.63,-0.21,0.02,2.94,1.05,0,"1 nonsynonymous","K56F",1
"lib2","SARS-CoV-2","GGGTCTTAGCAAGGTA",2,1.5,NA,NA,NA,NA,NA,NA,"stop","Y50S T63* Q168G",3
"lib2","SARS-CoV-2","GGGTCTTGAATGTGCG",6,66.63,9.45,-1.38,0.08,1.78,1.07,0,">1 nonsynonymous","T46Y V173T",2
"lib2","SARS-CoV-2","GGGTGAACACGGCCCC",3,9.69,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95I N107V N157A S164M P169A",5
"lib2","SARS-CoV-2","GGGTGAACACTTGCAT",4,83.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V77L G86R N107T S129C Q144L C158S",6
"lib2","SARS-CoV-2","GGGTGAACTCGTTTAC",11,112.45,8.19,-2.64,0.29,1.5,1.03,0.04,">1 nonsynonymous","K56M V71G",2
"lib2","SARS-CoV-2","GGGTGAATTTTAACTC",8,45.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68N I88F",2
"lib2","SARS-CoV-2","GGGTGACAAAAACGAA",5,72.46,9.86,-0.98,0.06,2.78,1.11,0,"1 nonsynonymous","G146N",1
"lib2","SARS-CoV-2","GGGTGACCCAGTCGTT",5,166.42,9,-1.84,0.05,2.82,1.07,0,">1 nonsynonymous","K56S Y143T",2
"lib2","SARS-CoV-2","GGGTGACGCGAAAAAT",9,91.19,10.48,-0.36,0.04,2.87,1.1,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","GGGTGACTAGTGAAAT",8,48.95,6.03,-4.81,0.66,1.5,1.1,0.01,">1 nonsynonymous","K132M E154L Y178P",3
"lib2","SARS-CoV-2","GGGTGACTTGGGAATT",2,40.66,10.89,0.06,0.09,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTGAGAACCCCTAC",10,51.47,9.15,-1.68,0.13,1.61,1.21,0.01,">1 nonsynonymous","F8S N13S N24R F134W",4
"lib2","SARS-CoV-2","GGGTGATAATGAAATA",6,81.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2D F8W T63Q G101I Y121E G146K",6
"lib2","SARS-CoV-2","GGGTGATCTAGGTAGT",3,5.64,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","C49R N120A E141M",3
"lib2","SARS-CoV-2","GGGTGATTGTGACCTA",10,45.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N24S F47L A89K F99L P149F",5
"lib2","SARS-CoV-2","GGGTGCAAGCTTACCC",10,1.99,NA,NA,NA,NA,NA,NA,"stop","T3F Y35* T55F G83D I142L",5
"lib2","SARS-CoV-2","GGGTGCAATAGATAGA",6,378.88,9.17,-1.66,0.06,2.49,1.07,0,">1 nonsynonymous","S43L S139Q N151K P177A",4
"lib2","SARS-CoV-2","GGGTGCACGGAGTCTT",4,66.36,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F8D N64T G83R A89M D98M N118M",6
"lib2","SARS-CoV-2","GGGTGCCATTTATAGG",3,70.79,10.68,-0.15,0.03,2.98,1.03,0,"1 nonsynonymous","S53C",1
"lib2","SARS-CoV-2","GGGTGCGAGAAAATAA",8,259.12,10.3,-0.53,0.03,2.86,1.05,0,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","GGGTGCGGGCGCCAGA",5,61.58,6,-4.84,2,1.5,1.15,0,"1 nonsynonymous","G101M",1
"lib2","SARS-CoV-2","GGGTGCTAAAATACCG",5,80.96,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C61S S113V I142D",3
"lib2","SARS-CoV-2","GGGTGGAATAGTAAAA",13,180.69,10.78,-0.06,0.04,2.91,1.09,0,">1 nonsynonymous","T46H Q84T",2
"lib2","SARS-CoV-2","GGGTGGATCGAGTCGC",5,0.76,NA,NA,NA,NA,NA,NA,"stop","L5* F17K L60S",3
"lib2","SARS-CoV-2","GGGTGGGCGCAAGTTT",4,1.43,NA,NA,NA,NA,NA,NA,"stop","S36Y P96R N151*",3
"lib2","SARS-CoV-2","GGGTGGTACAATCAAA",6,62.29,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N24L F44G A89E",3
"lib2","SARS-CoV-2","GGGTGGTAGAAACTTA",3,18.13,8.68,-2.16,0.14,1.92,1.08,0.01,">1 nonsynonymous","S41T K56S W106L G166S",4
"lib2","SARS-CoV-2","GGGTGGTATGAATTCT",10,36.86,8.36,-2.48,0.41,1.5,1,0.06,">1 nonsynonymous","P54R V65D D97R N171S",4
"lib2","SARS-CoV-2","GGGTGGTCTAGCCGAG",1,48.69,10.73,-0.1,0.05,3,1.02,0,"1 nonsynonymous","N110Y",1
"lib2","SARS-CoV-2","GGGTGGTTACAAGCCA",1,55.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G83A P177R",2
"lib2","SARS-CoV-2","GGGTGGTTCAACTGAT",3,8.15,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","Y50S F70R S113T R136S I142M L183S T201G",7
"lib2","SARS-CoV-2","GGGTGGTTGCAGTGTT",2,5.83,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","S69L P96L",2
"lib2","SARS-CoV-2","GGGTGTACACATACGT",1,13.22,10.02,-0.81,0.16,2.83,1,0.01,">1 nonsynonymous","E10S F44K",2
"lib2","SARS-CoV-2","GGGTGTACTATCTTTC",5,1.18,NA,NA,NA,NA,NA,NA,"stop","I28V N107V Q168* G174L",4
"lib2","SARS-CoV-2","GGGTGTCCCCTCACAA",3,106.79,10.68,-0.16,0.02,2.93,1.05,0,">1 nonsynonymous","S41T T85Y",2
"lib2","SARS-CoV-2","GGGTGTGTAAAAATAA",4,110.64,10.35,-0.49,0.04,2.91,1.06,0,">1 nonsynonymous","T46K C61M T85K",3
"lib2","SARS-CoV-2","GGGTGTTGTCTTACGG",4,31.43,8.69,-2.14,0.22,1.5,1,0.02,">1 nonsynonymous","K48H C61K E154R V173T",4
"lib2","SARS-CoV-2","GGGTGTTTACACACTG",5,68.17,10.85,0.01,0.08,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTTAAAAGAGTATG",5,94.33,9.77,-1.06,0.04,2.93,1.08,0,"1 nonsynonymous","K87D",1
"lib2","SARS-CoV-2","GGGTTAAAATAATCAA",16,204.12,9.4,-1.44,0.07,2.04,1.1,0,">1 nonsynonymous","T63A L162Y",2
"lib2","SARS-CoV-2","GGGTTAATTCGATCAT",3,42.47,8.69,-2.15,0.16,1.57,1.13,0.01,">1 nonsynonymous","F44C E135L",2
"lib2","SARS-CoV-2","GGGTTACACACACATC",13,293.26,10.22,-0.61,0.02,2.81,1.01,0,">1 nonsynonymous","I80L A192W",2
"lib2","SARS-CoV-2","GGGTTACCGTAGCAAT",3,32.42,10.7,-0.14,0.07,2.79,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTTACGGCTCCCTT",2,42.76,10.55,-0.29,0.06,2.93,1.07,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","GGGTTAGAATATAGTT",3,33.84,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L60A K94G G101A Q144V T201C",5
"lib2","SARS-CoV-2","GGGTTAGCACGAGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib2","SARS-CoV-2","GGGTTATACAGCATCA",6,68.83,10.85,0.01,0.05,2.91,1.12,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","GGGTTATACCCTCTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43I V115C Y159G R179F",4
"lib2","SARS-CoV-2","GGGTTATATACAAAAC",1,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V I80V T148W",3
"lib2","SARS-CoV-2","GGGTTATATTCTTATC",12,102.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A105V Y165S S184H",3
"lib2","SARS-CoV-2","GGGTTATCACCGCTAC",3,38.57,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","A42W V103Y K114E Y159S",4
"lib2","SARS-CoV-2","GGGTTATCACGATGAA",6,19.31,6.78,-4.05,0.32,1.5,1.1,0.01,">1 nonsynonymous","V11Q F44D Q84V F134V",4
"lib2","SARS-CoV-2","GGGTTCAAAGCCTTAA",2,79.48,7.01,-3.83,0.25,1.5,1.19,0.01,">1 nonsynonymous","C61S Y143I N157Y P197A",4
"lib2","SARS-CoV-2","GGGTTCAACTATATCG",13,156.84,10.65,-0.18,0.05,2.9,1.09,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","GGGTTCAAGAACCCTT",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V A89T S139N S147V",4
"lib2","SARS-CoV-2","GGGTTCCCAACTGGCA",2,21.67,10.73,-0.11,0.04,3,1.01,0,">1 nonsynonymous","G9R K56R",2
"lib2","SARS-CoV-2","GGGTTCCTGAAACTTA",1,14.93,6.43,-4.41,0.4,1.5,1.04,0.01,">1 nonsynonymous","N4L D59Y L95R",3
"lib2","SARS-CoV-2","GGGTTCGACCCTTCTA",7,126.18,10.82,-0.02,0.04,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTTCTACAGTCTCC",6,78.04,10.44,-0.4,0.06,2.84,1.07,0,">1 nonsynonymous","N107S S200L",2
"lib2","SARS-CoV-2","GGGTTCTACCGTACTC",4,46.9,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N13A S45L G86Q G117E",4
"lib2","SARS-CoV-2","GGGTTCTCCCGGCATT",4,53.66,10.77,-0.06,0.08,2.81,1.17,0,">1 nonsynonymous","T3L T148R",2
"lib2","SARS-CoV-2","GGGTTCTTAAGTATTT",2,46.34,10.77,-0.06,0.06,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GGGTTGAATCTCTTCA",3,10.81,6.14,-4.7,0.9,1.5,1.13,0.03,">1 nonsynonymous","C61V K94S T100D",3
"lib2","SARS-CoV-2","GGGTTGACTCAGCGGT",28,490.84,10.68,-0.15,0.03,2.93,1.07,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","GGGTTGACTGTTATTC",33,362.09,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","K26I Y121N Y165A H189Y",4
"lib2","SARS-CoV-2","GGGTTGATAGTCGAAA",9,69.85,9.92,-0.92,0.09,2.39,1,0,">1 nonsynonymous","S19K T100L",2
"lib2","SARS-CoV-2","GGGTTGCGTGTTGTAC",2,25.18,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F134A P149F T170V S200D",4
"lib2","SARS-CoV-2","GGGTTGCTAATGCTAT",6,31.58,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36R C102Y L183S",3
"lib2","SARS-CoV-2","GGGTTGCTGGCTACCG",1,18.43,8.85,-1.98,0.08,3,1.08,0,">1 nonsynonymous","N157H P197Q",2
"lib2","SARS-CoV-2","GGGTTGTAAACCAACC",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L N58K F134A Y143F",4
"lib2","SARS-CoV-2","GGGTTGTCAAAACATT",1,8.7,10.86,0.03,0.09,3,1.01,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GGGTTGTCCCAAACCA",23,188.06,9.78,-1.05,0.07,2.2,1.06,0,">1 nonsynonymous","C6I S29Q L60R T201N",4
"lib2","SARS-CoV-2","GGGTTGTGATATTCCA",1,68.88,10.45,-0.39,0.05,2.92,1.02,0,">1 nonsynonymous","N109L F160T",2
"lib2","SARS-CoV-2","GGGTTGTTAAAGGGGC",3,47.67,10.73,-0.11,0.05,2.93,1.07,0,">1 nonsynonymous","K48M N130V",2
"lib2","SARS-CoV-2","GGGTTTACGAAATAAT",13,123.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S53A Y119F N157P",3
"lib2","SARS-CoV-2","GGGTTTATCAGCGAAA",26,312.23,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G9S L95R R127H F156K",4
"lib2","SARS-CoV-2","GGGTTTATCGAATTGA",2,19.07,7.21,-3.63,0.38,1.5,1.04,0.04,">1 nonsynonymous","N40Y N64Y G86V",3
"lib2","SARS-CoV-2","GGGTTTCCCATACGAA",1,14.57,9.9,-0.93,0.16,2.41,1,0.02,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","GGGTTTCGTAACTTTC",2,65.59,9.87,-0.97,0.03,2.99,1.02,0,">1 nonsynonymous","N130P E141D Q168E",3
"lib2","SARS-CoV-2","GGGTTTCTCTCGGAGC",1,47.12,9.91,-0.93,0.07,2.83,1.02,0,">1 nonsynonymous","L60E Y91W D97E",3
"lib2","SARS-CoV-2","GGGTTTTACCCCAAAA",1,9.17,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D112N Y119L",2
"lib2","SARS-CoV-2","GGGTTTTATCTCGAAC",5,38.82,10.34,-0.5,0.07,2.79,1.05,0,">1 nonsynonymous","K128C P149T",2
"lib2","SARS-CoV-2","GGGTTTTATGCATAGG",3,44.82,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V71W P82R L95V W106V",4
"lib2","SARS-CoV-2","GGGTTTTGAATGTAGT",9,155.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N24A I88R",2
"lib2","SARS-CoV-2","GGTAAAAAAACAACGT",2,35.15,10.13,-0.7,0.09,2.62,1.03,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","GGTAAAAAACTGGATC",1,50.49,10.81,-0.03,0.07,2.98,1.07,0,">1 nonsynonymous","N1S S36A",2
"lib2","SARS-CoV-2","GGTAAAAACCTCCATA",9,82.99,10.2,-0.64,0.05,2.89,1.02,0,">1 nonsynonymous","E10K K56S R78L",3
"lib2","SARS-CoV-2","GGTAAAAAGATATCAA",2,58.7,8.99,-1.85,0.08,2.61,1.09,0,"1 nonsynonymous","A145N",1
"lib2","SARS-CoV-2","GGTAAAAAGGCAGCTA",2,17.09,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18V I88F V180F",3
"lib2","SARS-CoV-2","GGTAAAAATATCGAGT",3,27.23,8.08,-2.75,0.17,1.5,1.11,0.01,">1 nonsynonymous","I28K G155T",2
"lib2","SARS-CoV-2","GGTAAAACAAAATTAA",1,29.87,10.78,-0.05,0.04,2.97,1.05,0,">1 nonsynonymous","V37T D90S",2
"lib2","SARS-CoV-2","GGTAAAAGTCGAACAC",2,75.14,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S29V S69L A105L",3
"lib2","SARS-CoV-2","GGTAAAATACAATTAA",1,5.58,10.77,-0.07,0.09,3,1.02,0,">1 nonsynonymous","I2T N40S T201S",3
"lib2","SARS-CoV-2","GGTAAAATACCAACCA",9,210.33,10.5,-0.34,0.04,2.91,1.05,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","GGTAAAATAGCCTACT",4,46.95,10.64,-0.2,0.08,2.83,1.18,0,"1 nonsynonymous","L188R",1
"lib2","SARS-CoV-2","GGTAAAATGAGCCAAA",1,38.79,10.61,-0.23,0.04,3,1,0,">1 nonsynonymous","Q144P F160N",2
"lib2","SARS-CoV-2","GGTAAACAAAATAATC",5,36.59,10.71,-0.13,0.05,2.95,1.06,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","GGTAAACAAACCATTA",13,10.4,NA,NA,NA,NA,NA,NA,"stop","Q84* V115L L183S",3
"lib2","SARS-CoV-2","GGTAAACAACATATGA",6,3.82,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","GGTAAACAACTCCCCA",2,53.98,10.15,-0.68,0.04,2.92,1.11,0,">1 nonsynonymous","A42E K87Q",2
"lib2","SARS-CoV-2","GGTAAACAAGAAAATT",9,16.86,6.29,-4.55,0.41,1.81,1.14,0.01,">1 nonsynonymous","N1H A42P I88V G116C Y123H G146V S184A",7
"lib2","SARS-CoV-2","GGTAAACAATAAAAGT",6,80.04,10,-0.83,0.06,2.43,1.03,0,">1 nonsynonymous","N58C K94A",2
"lib2","SARS-CoV-2","GGTAAACAATAATTCA",3,23.09,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C6T D34S G86I",3
"lib2","SARS-CoV-2","GGTAAACACTGCAGAT",3,80.87,10.66,-0.18,0.04,2.86,1.12,0,"1 nonsynonymous","D59F",1
"lib2","SARS-CoV-2","GGTAAACAGCAGTCGG",2,130.01,9.89,-0.95,0.06,2.54,1.03,0,">1 nonsynonymous","P7C L57K",2
"lib2","SARS-CoV-2","GGTAAACAGCGGCACA",1,11.33,6,-4.84,1.65,3,1.22,0.02,">1 nonsynonymous","I72H P96K",2
"lib2","SARS-CoV-2","GGTAAACATCTTGATG",1,15.79,8.3,-2.54,0.15,3,1.04,0.01,">1 nonsynonymous","R73E Q84S E154V L188T",4
"lib2","SARS-CoV-2","GGTAAACCCAACCTAT",2,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K P82R W106S",3
"lib2","SARS-CoV-2","GGTAAACCGCTGCTGA",5,116.4,10.21,-0.62,0.04,2.9,1.03,0,">1 nonsynonymous","E10T I142Y",2
"lib2","SARS-CoV-2","GGTAAACCTGAAGAGG",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99M C150M",2
"lib2","SARS-CoV-2","GGTAAACGAAGGATCC",4,42.9,9.69,-1.15,0.07,2.73,1.06,0,">1 nonsynonymous","N13C T201C",2
"lib2","SARS-CoV-2","GGTAAACTCTGATTCC",8,51.04,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C6G D68G R136S",3
"lib2","SARS-CoV-2","GGTAAACTGAGACACA",11,7.63,NA,NA,NA,NA,NA,NA,"stop","I28E N40W S113Y G146*",4
"lib2","SARS-CoV-2","GGTAAAGAAGTAACAA",4,64.81,10.43,-0.41,0.04,2.87,1.06,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","GGTAAAGAATGAATAG",3,9.92,6,-4.84,2,3,1.28,0.03,">1 nonsynonymous","S29F S41P V77E K94D",4
"lib2","SARS-CoV-2","GGTAAAGAGAAACCAA",7,35.15,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","T3H V37K I88Q P133Y Q144T G152D F160R",7
"lib2","SARS-CoV-2","GGTAAAGCTTAGCATA",1,23.33,8.99,-1.84,0.08,2.88,1.11,0,">1 nonsynonymous","R16V Y35F T85L Y119I",4
"lib2","SARS-CoV-2","GGTAAAGGAAAAAGCA",1,14.13,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","R27F K128S G152P Q176K",4
"lib2","SARS-CoV-2","GGTAAAGTACGAATAG",9,80.95,6.02,-4.82,0.23,3,1.09,0,">1 nonsynonymous","L5D Q144L C158T",3
"lib2","SARS-CoV-2","GGTAAAGTATTCAAAA",4,39.1,6,-4.84,2,1.5,1.25,0.06,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","GGTAAATAATGGAGAA",1,32.32,10.92,0.09,0.06,2.99,1.03,0,"1 nonsynonymous","V173Y",1
"lib2","SARS-CoV-2","GGTAAATCAAATCCGC",1,15.2,10.16,-0.68,0.14,2.7,1.01,0.01,">1 nonsynonymous","C6L V65A",2
"lib2","SARS-CoV-2","GGTAAATCACCTAAAG",2,31.41,10.46,-0.38,0.11,2.8,1.14,0,"1 nonsynonymous","I138Y",1
"lib2","SARS-CoV-2","GGTAAATGACCAACAT",5,85.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y50P R73Q K87D",3
"lib2","SARS-CoV-2","GGTAAATGACGGATCA",5,57.26,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","Y39Q F70S Y165K K198M",4
"lib2","SARS-CoV-2","GGTAAATGGACCTAAT",3,52.04,9.88,-0.96,0.12,2.15,1.07,0.01,">1 nonsynonymous","N1W F47L P54S K199L",4
"lib2","SARS-CoV-2","GGTAAATGTTATAATT",1,25.18,10.05,-0.78,0.12,2.67,1,0,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","GGTAAATTATACTCAC",3,26.74,10.69,-0.14,0.04,2.94,1.09,0,">1 nonsynonymous","I28W V173Y",2
"lib2","SARS-CoV-2","GGTAAATTGACAGCAA",1,7.56,6,-4.84,2,3,1.03,0,">1 nonsynonymous","V181G H189P",2
"lib2","SARS-CoV-2","GGTAACAATTGGGTTG",2,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F G51V N58Q F134R",4
"lib2","SARS-CoV-2","GGTAACACCGACGCCA",2,25.22,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V32L L95F G172K",3
"lib2","SARS-CoV-2","GGTAACACTAACTGGT",3,15.46,6.45,-4.38,2,3,1.12,0,">1 nonsynonymous","C6T C61N L95D",3
"lib2","SARS-CoV-2","GGTAACAGAATAACAA",7,29.94,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","G9S P82S P149W",3
"lib2","SARS-CoV-2","GGTAACAGTAAGAAAG",4,172.93,10,-0.84,0.07,2.56,1.06,0,">1 nonsynonymous","Y91A N130V",2
"lib2","SARS-CoV-2","GGTAACATATATTGTA",2,26.66,8.67,-2.17,0.35,1.67,1.25,0.04,">1 nonsynonymous","N107F N130P Y178S",3
"lib2","SARS-CoV-2","GGTAACATGACAACGA",2,32.3,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L57K Q79W D97E C158P",4
"lib2","SARS-CoV-2","GGTAACATTACGAATT",9,46.86,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K56S I88F N130A E135R C158G T201M",6
"lib2","SARS-CoV-2","GGTAACCAAAAGACTA",4,42.3,9.21,-1.63,0.09,2.75,1.06,0,">1 nonsynonymous","A14G N58S T170S",3
"lib2","SARS-CoV-2","GGTAACCAAACCTGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* D98N",2
"lib2","SARS-CoV-2","GGTAACCAGAATAAAT",4,6.81,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","A33F C61S F99L S139P",4
"lib2","SARS-CoV-2","GGTAACCCATTGACGT",11,221.68,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D34V K94E Q163V Q176R",4
"lib2","SARS-CoV-2","GGTAACCCCAGAATAA",4,16.72,9.9,-0.94,0.12,2.81,1.16,0.01,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","GGTAACCTAATCCTTA",4,104.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6V A89G F126S C195T",4
"lib2","SARS-CoV-2","GGTAACCTGAAGAAGA",8,85.86,9.42,-1.41,0.08,2.17,1.07,0,">1 nonsynonymous","N58Y Y91H",2
"lib2","SARS-CoV-2","GGTAACCTGTGAATGT",8,60.42,8.15,-2.68,0.16,2.09,1.09,0.01,">1 nonsynonymous","T55V G146V G152S",3
"lib2","SARS-CoV-2","GGTAACGCCCCCTCTA",2,0.16,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib2","SARS-CoV-2","GGTAACGCTCACCACG",4,31.71,9.61,-1.23,0.1,2.67,1.04,0,">1 nonsynonymous","T46Q Y119S",2
"lib2","SARS-CoV-2","GGTAACGGACCACAAA",4,39.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","GGTAACGGACGGTAAC",11,71.3,9.23,-1.61,0.11,1.63,1.15,0.01,"1 nonsynonymous","G86H",1
"lib2","SARS-CoV-2","GGTAACGGCGCGTTGA",6,27.76,6.74,-4.09,0.23,1.5,1.06,0.01,">1 nonsynonymous","W23C E141F",2
"lib2","SARS-CoV-2","GGTAACGTACCAGATT",4,18.41,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P7T G74L A89R S139M",4
"lib2","SARS-CoV-2","GGTAACTCCACTATTC",7,133.63,10.31,-0.53,0.04,2.83,1.09,0,"1 nonsynonymous","N40V",1
"lib2","SARS-CoV-2","GGTAACTGAATAACTA",5,68.58,10.66,-0.18,0.05,2.91,1.11,0,">1 nonsynonymous","N1P I104V",2
"lib2","SARS-CoV-2","GGTAACTTAAACAGCA",18,263.15,10.83,0,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTAACTTATGGCATA",4,54.46,10.3,-0.54,0.06,2.77,1.12,0,">1 nonsynonymous","I2L K26W",2
"lib2","SARS-CoV-2","GGTAAGAAACCAATCT",5,1.57,NA,NA,NA,NA,NA,NA,"stop","F99* Y143M P161F",3
"lib2","SARS-CoV-2","GGTAAGAAACCGATCA",1,39.36,10.87,0.03,0.06,2.94,1.05,0,"1 nonsynonymous","I2P",1
"lib2","SARS-CoV-2","GGTAAGAACATACACT",3,20.94,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5H A18M F70W P82Q",4
"lib2","SARS-CoV-2","GGTAAGAATATAATTA",2,198.89,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","K56F F126K G166Y K199M",4
"lib2","SARS-CoV-2","GGTAAGAATCAAACGC",2,97.73,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P7E T15A G83D G172A Y175F",5
"lib2","SARS-CoV-2","GGTAAGACACAAGAAT",6,30.72,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","W23G Y91M V115Q L122F",4
"lib2","SARS-CoV-2","GGTAAGACCTACCTTA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","F44M K87N Y93S Y178*",4
"lib2","SARS-CoV-2","GGTAAGAGAAATATAA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","N13V T46*",2
"lib2","SARS-CoV-2","GGTAAGATGAACGACT",2,7.79,10.21,-0.62,0.12,2.82,1.15,0.01,">1 nonsynonymous","E141R N151I",2
"lib2","SARS-CoV-2","GGTAAGCACTGGATTG",1,30.89,10.72,-0.11,0.03,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTAAGCATAGACAAA",4,2.51,NA,NA,NA,NA,NA,NA,"stop","I2L S36Q F44* G51V A89* N107H V153L",7
"lib2","SARS-CoV-2","GGTAAGCCTTTCGTAT",5,41.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D34L S113L",2
"lib2","SARS-CoV-2","GGTAAGCGCTGACCAA",12,190.46,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T85M Y119L S129I Y159S",4
"lib2","SARS-CoV-2","GGTAAGCGGCATATGG",2,29.72,7.91,-2.93,0.28,1.5,1.1,0.03,">1 nonsynonymous","T85M Y143N V173H",3
"lib2","SARS-CoV-2","GGTAAGCTGAAAGCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L R127Q",2
"lib2","SARS-CoV-2","GGTAAGGAACTTCCAT",13,100,10.49,-0.35,0.03,2.94,1.04,0,">1 nonsynonymous","R27G K198R",2
"lib2","SARS-CoV-2","GGTAAGGATTGAATAG",4,27.72,8.62,-2.22,0.32,1.5,1,0.04,">1 nonsynonymous","V20D G146V G174L",3
"lib2","SARS-CoV-2","GGTAAGTAATTGTCGA",6,120.67,8.47,-2.36,0.1,2.95,1.07,0,">1 nonsynonymous","K56G A67V Y159M",3
"lib2","SARS-CoV-2","GGTAAGTGAAAAGACT",15,5.01,NA,NA,NA,NA,NA,NA,"stop","C6M V11P G86F P96* A105* R136F C158S",7
"lib2","SARS-CoV-2","GGTAAGTTCTAAACTC",3,107.73,9.39,-1.45,0.09,1.5,1.09,0,">1 nonsynonymous","A22S L131Y",2
"lib2","SARS-CoV-2","GGTAATAAAGATCTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","F17* N118L",2
"lib2","SARS-CoV-2","GGTAATACAATGCTGA",29,124.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2R K94L F134I S184G",4
"lib2","SARS-CoV-2","GGTAATACCTCCATAC",9,72.4,10.77,-0.06,0.04,2.97,1.02,0,"1 nonsynonymous","R16L",1
"lib2","SARS-CoV-2","GGTAATACTAGCTCAA",5,116.22,10.74,-0.09,0.03,2.96,1.04,0,">1 nonsynonymous","L5R G152Q S200C",3
"lib2","SARS-CoV-2","GGTAATACTGGCCGAC",1,35.45,8.26,-2.57,0.14,1.5,1.08,0.01,">1 nonsynonymous","G9V Y91G K114D",3
"lib2","SARS-CoV-2","GGTAATAGTATTTGAT",7,104.52,10.81,-0.03,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTAATATGTACGAAG",4,49.1,10.62,-0.21,0.06,3,1,0,">1 nonsynonymous","S29G S164Y",2
"lib2","SARS-CoV-2","GGTAATCAAAGAAAAA",6,33.51,6,-4.83,0.64,3,1.13,0.01,">1 nonsynonymous","S45I C49G F99V",3
"lib2","SARS-CoV-2","GGTAATCACGATAAGG",1,35.46,10.8,-0.04,0.03,2.99,1,0,">1 nonsynonymous","K132S F160H",2
"lib2","SARS-CoV-2","GGTAATCTAAACAGTA",9,1.32,NA,NA,NA,NA,NA,NA,"stop","Y21*",1
"lib2","SARS-CoV-2","GGTAATCTAGCGCCAT",6,0.02,NA,NA,NA,NA,NA,NA,"stop","G9Q S36* C61N",3
"lib2","SARS-CoV-2","GGTAATGAACCCGTTG",2,104.07,10.89,0.06,0.04,2.94,1.08,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","GGTAATGACCTTAGCA",9,149.44,10.74,-0.1,0.04,2.95,1.06,0,">1 nonsynonymous","E141Q P149N",2
"lib2","SARS-CoV-2","GGTAATGATGAAAGTA",6,68.49,10.76,-0.08,0.05,2.96,1.05,0,"1 nonsynonymous","G116K",1
"lib2","SARS-CoV-2","GGTAATGCTGCTACTA",3,49.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S36L A105P",2
"lib2","SARS-CoV-2","GGTAATGTTGTAACAA",5,66.13,10.87,0.03,0.08,2.84,1.17,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","GGTAATTAAGCGGACA",4,43.58,10.8,-0.03,0.06,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTAATTATACTACAG",3,161.29,9.16,-1.68,0.03,2.95,1.05,0,">1 nonsynonymous","I2N L60T E154F",3
"lib2","SARS-CoV-2","GGTAATTATTGATAAC",2,88.13,9.26,-1.57,0.1,1.97,1.08,0,">1 nonsynonymous","S19H Q84F K198Y",3
"lib2","SARS-CoV-2","GGTAATTCTTAATCAC",6,20.63,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","I2R Q79R I80T I104M N118D G152A",6
"lib2","SARS-CoV-2","GGTAATTGCACACCAA",1,14.38,10.41,-0.42,0.21,2.08,1.05,0.01,"1 nonsynonymous","I80M",1
"lib2","SARS-CoV-2","GGTAATTGTGTTAGGT",3,14.04,9.7,-1.13,0.11,2.29,1,0.01,">1 nonsynonymous","D59V I142H",2
"lib2","SARS-CoV-2","GGTACAAAAGATCAAT",6,54.78,6,-4.84,1.96,1.5,1.16,0.02,">1 nonsynonymous","Y39S D112Q N118P D137S",4
"lib2","SARS-CoV-2","GGTACAAAATCTTAGA",10,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L P96S",2
"lib2","SARS-CoV-2","GGTACAAAGAAAGTGA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","V37Y C61A D97* E141T",4
"lib2","SARS-CoV-2","GGTACAAAGTGTTGGG",10,28.6,9.69,-1.15,0.13,2.29,1.08,0.01,">1 nonsynonymous","N1K E10I L38M",3
"lib2","SARS-CoV-2","GGTACAAATGAAACTA",2,96.23,9.72,-1.12,0.11,2.17,1.07,0,">1 nonsynonymous","R16Q L38P",2
"lib2","SARS-CoV-2","GGTACAATAACTAGTA",2,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144H V153W",2
"lib2","SARS-CoV-2","GGTACAATATTTACTC",5,12.13,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49F I104F N109I F156E T201V",5
"lib2","SARS-CoV-2","GGTACAATTGAGTTCC",3,22.61,10.22,-0.61,0.09,2.72,1.06,0.01,">1 nonsynonymous","S139H P149M",2
"lib2","SARS-CoV-2","GGTACACAAAATCAAG",2,27.16,10.62,-0.22,0.07,2.95,1.03,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","GGTACACAATTTAGCA",4,77.93,9.69,-1.14,0.05,2.19,1.03,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GGTACACAGCACAGGT",4,30.66,10.4,-0.44,0.07,2.86,1.08,0,"1 nonsynonymous","K48Y",1
"lib2","SARS-CoV-2","GGTACACTGGGCGGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D112* Y119F",2
"lib2","SARS-CoV-2","GGTACAGCCCACGTCA",2,9.13,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G86L L95N F156M S200H",4
"lib2","SARS-CoV-2","GGTACAGGTACCCGTT",2,91.39,10.79,-0.05,0.03,2.88,1.14,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","GGTACAGTAACAACGG",3,28.28,10.84,0,0.08,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTACAGTGTTGAATA",2,1.09,NA,NA,NA,NA,NA,NA,"stop","I2P F12*",2
"lib2","SARS-CoV-2","GGTACAGTTGTTAAAC",3,9.73,6.3,-4.54,0.4,3,1.35,0.01,">1 nonsynonymous","Y93M L111E",2
"lib2","SARS-CoV-2","GGTACAGTTTAAAACT",2,47.12,10.84,0,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTACATATAGAAAGG",6,34.88,8.81,-2.02,0.28,1.5,1.05,0.04,">1 nonsynonymous","T15R A42K W106S Y123R G152Q S200M",6
"lib2","SARS-CoV-2","GGTACATCATTATTCC",2,0.12,NA,NA,NA,NA,NA,NA,"stop","P96L S113* G155F",3
"lib2","SARS-CoV-2","GGTACATGTTTCATGC",1,23.91,8.26,-2.58,0.21,1.96,1.17,0.02,">1 nonsynonymous","L38P A105S F156S",3
"lib2","SARS-CoV-2","GGTACCAAAATTTAGA",8,100.42,10.55,-0.29,0.05,2.94,1.06,0,"1 nonsynonymous","A18M",1
"lib2","SARS-CoV-2","GGTACCAAAGTTGTCA",4,37.94,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","C49Q R127V",2
"lib2","SARS-CoV-2","GGTACCAACATCTTTC",7,168.24,10.67,-0.16,0.03,2.96,1.05,0,">1 nonsynonymous","Y39L S45P K56D",3
"lib2","SARS-CoV-2","GGTACCACTGGTAGAT",3,10.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6Y S19A N58F P177E",4
"lib2","SARS-CoV-2","GGTACCATTGCAACGT",8,60.02,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y93T N107V Y123S",3
"lib2","SARS-CoV-2","GGTACCCAAAATAGAA",1,0.15,NA,NA,NA,NA,NA,NA,"stop","I28P K56V D68S T85* F99C",5
"lib2","SARS-CoV-2","GGTACCCATACCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","GGTACCCATCTACAAA",15,289.38,10.14,-0.7,0.03,2.89,1.02,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","GGTACCCTTACCTATG",6,2.73,NA,NA,NA,NA,NA,NA,"stop","T140* N151Y Q168N",3
"lib2","SARS-CoV-2","GGTACCGAAGACAAGT",10,74.77,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11P S43L G51V D98L P149S",5
"lib2","SARS-CoV-2","GGTACCGAATCCAGCG",6,94.69,9.17,-1.66,0.05,2.88,1.12,0,">1 nonsynonymous","T85I Y119A",2
"lib2","SARS-CoV-2","GGTACCGAGGCATATA",12,56.81,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C49Q A67T N118H Q168A",4
"lib2","SARS-CoV-2","GGTACCGCGACATAAA",1,24.27,7.38,-3.46,0.4,1.5,1.05,0.04,">1 nonsynonymous","D90L P96L E135L F167S",4
"lib2","SARS-CoV-2","GGTACCTAGACCCATA",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Y A145G T170S",3
"lib2","SARS-CoV-2","GGTACCTATTCTCCTA",12,133.54,10.78,-0.05,0.03,2.93,1.08,0,">1 nonsynonymous","I28M N64G",2
"lib2","SARS-CoV-2","GGTACCTGAAATTCGT",11,206.62,10.21,-0.62,0.03,2.96,1.05,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","GGTACGAACGAACAAG",5,6.29,6.11,-4.73,1.67,1.5,1.17,0.02,">1 nonsynonymous","A14I I28R S41W",3
"lib2","SARS-CoV-2","GGTACGAATTACGTAT",7,74.99,6,-4.84,1.19,1.5,1.14,0.02,">1 nonsynonymous","K94C N120F S129V T170R",4
"lib2","SARS-CoV-2","GGTACGAATTCACTAG",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F Y66L Q84L I104M Y119L E135K",6
"lib2","SARS-CoV-2","GGTACGACGGCCTGTC",9,49.45,6.33,-4.51,0.81,1.5,1.24,0.04,">1 nonsynonymous","V11I N64Y G86R",3
"lib2","SARS-CoV-2","GGTACGATAATACCTA",7,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46P Y121T",2
"lib2","SARS-CoV-2","GGTACGCACAACGGAG",6,0.62,NA,NA,NA,NA,NA,NA,"stop","S41A N120M T148I P161K Q176*",5
"lib2","SARS-CoV-2","GGTACGCAGAGTTCTA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","V11I E76* E141S T201W",4
"lib2","SARS-CoV-2","GGTACGCGGTAATCAT",4,15.11,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T55K V182G",2
"lib2","SARS-CoV-2","GGTACGGATCTACGCT",1,0.36,NA,NA,NA,NA,NA,NA,"stop","A33* D59S D98S",3
"lib2","SARS-CoV-2","GGTACGGTTAATAACG",1,23.73,9.24,-1.6,0.17,2.12,1.05,0.01,">1 nonsynonymous","V37G N64Q N107V V173R P197Q",5
"lib2","SARS-CoV-2","GGTACGTAAGTATTTA",10,17.72,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D90V P133I L183R",3
"lib2","SARS-CoV-2","GGTACGTACTAACTGG",1,13.02,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N1R Y50T G117S F185Y",4
"lib2","SARS-CoV-2","GGTACGTTTGTAACCG",2,7.96,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N1F F44L L60A K128V Y159S K198D",6
"lib2","SARS-CoV-2","GGTACTAAAAAACCCC",10,416.62,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36G D90C D137F Y143H G172N P177G",6
"lib2","SARS-CoV-2","GGTACTAACATCTCGC",2,30.79,6,-4.84,0.43,2.19,1.04,0,">1 nonsynonymous","R25E Y50A",2
"lib2","SARS-CoV-2","GGTACTATCGAAATTA",7,59.47,10.32,-0.52,0.07,2.82,1.03,0,">1 nonsynonymous","F134L V153R F160L",3
"lib2","SARS-CoV-2","GGTACTGAAAACGACT",3,0.29,NA,NA,NA,NA,NA,NA,"stop","D97*",1
"lib2","SARS-CoV-2","GGTACTGCAAAGCAAA",1,10.72,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F47V I72Y N151S",3
"lib2","SARS-CoV-2","GGTACTGCACGTAACG",5,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V S19E R27P C49M F99V L183R",6
"lib2","SARS-CoV-2","GGTACTGCATAAAGAT",7,134.38,10.65,-0.19,0.04,2.86,1.1,0,">1 nonsynonymous","A22E G51K",2
"lib2","SARS-CoV-2","GGTACTGGGATACGCT",10,73.98,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V77W Y91A C102P C150F",4
"lib2","SARS-CoV-2","GGTACTGGTCCGAGCA",10,152.5,10.73,-0.11,0.03,2.98,1.02,0,">1 nonsynonymous","S29T S184A",2
"lib2","SARS-CoV-2","GGTACTGTACGTCTTA",1,29.65,7.36,-3.48,0.37,1.5,1.09,0.05,"1 nonsynonymous","A22P",1
"lib2","SARS-CoV-2","GGTACTTAAAGAGACA",2,37.88,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C31N R124M",2
"lib2","SARS-CoV-2","GGTAGAAAAAACCGAC",10,142.28,6,-4.84,0.82,1.5,1.16,0.01,">1 nonsynonymous","G152C G172D",2
"lib2","SARS-CoV-2","GGTAGAACCTTCATAC",6,77.01,10.37,-0.46,0.06,2.92,1.07,0,">1 nonsynonymous","G9W I104A S129E A190D",4
"lib2","SARS-CoV-2","GGTAGAAGAATATTTA",10,95.68,10.85,0.01,0.06,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTAGAATACACACAC",15,224.24,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N40L A105Q S113H R136L",4
"lib2","SARS-CoV-2","GGTAGAATCTATGATA",7,117.24,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","S19K S41L N171L Y175K",4
"lib2","SARS-CoV-2","GGTAGACCATAGCTAA",3,24.28,6.15,-4.68,0.98,1.5,1.2,0.02,">1 nonsynonymous","F8T A14T R136G",3
"lib2","SARS-CoV-2","GGTAGACCTTACGGAG",11,62.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T15V N24S I88N N120F I142M",5
"lib2","SARS-CoV-2","GGTAGAGAAGTAAGAA",8,45.76,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F99Y S113A Y178R",3
"lib2","SARS-CoV-2","GGTAGAGACAACACTA",4,4.41,NA,NA,NA,NA,NA,NA,"stop","I2* V37H",2
"lib2","SARS-CoV-2","GGTAGAGACCTTAATT",3,0.05,NA,NA,NA,NA,NA,NA,"stop","A33H G51* D97N Y119M T201E",5
"lib2","SARS-CoV-2","GGTAGAGATTTACGAA",3,84.5,9.37,-1.46,0.08,1.81,1.1,0,">1 nonsynonymous","A14T N40I F160S",3
"lib2","SARS-CoV-2","GGTAGAGGTAGTAGCT",5,0,NA,NA,NA,NA,NA,NA,"stop","T46F K56M N110S N151* F160L",5
"lib2","SARS-CoV-2","GGTAGATAAACGACGA",2,13.19,6,-4.84,2,1.5,1.31,0.07,">1 nonsynonymous","C49L Y93E K114S",3
"lib2","SARS-CoV-2","GGTAGATAAATAGACG",10,95.4,6,-4.84,1.33,1.5,1.2,0.03,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","GGTAGCACGCGAGAAG",2,37.57,10.21,-0.62,0.07,2.89,1.04,0,">1 nonsynonymous","I142L G166A",2
"lib2","SARS-CoV-2","GGTAGCCACAAACCAG",6,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A V37S L95D V115R P133S F185T",6
"lib2","SARS-CoV-2","GGTAGCCACACGCTGC",22,153.09,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C61R D112W N118C K128R",4
"lib2","SARS-CoV-2","GGTAGCCATTAACTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R N40K P149S V153G Y178T",5
"lib2","SARS-CoV-2","GGTAGCCTAGCCATAG",8,35.09,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","R27T F70H",2
"lib2","SARS-CoV-2","GGTAGCGATACGGTTC",3,164.72,10.55,-0.29,0.05,2.96,1.07,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","GGTAGCGATTAAAGCC",4,64.94,6.13,-4.71,0.91,1.5,1.2,0.02,">1 nonsynonymous","A89N R127C",2
"lib2","SARS-CoV-2","GGTAGCGCGCACAGTC",5,99.43,9.91,-0.92,0.05,2.54,1.03,0,">1 nonsynonymous","N40I T46I",2
"lib2","SARS-CoV-2","GGTAGGAACCCCGTCA",4,18.49,6,-4.84,2,3,1.15,0,">1 nonsynonymous","P96V Q176T",2
"lib2","SARS-CoV-2","GGTAGGACATGTGACT",1,68.05,10.81,-0.03,0.04,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTAGGATAAAATTGC",1,34.68,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P7Y N151K Y175I",3
"lib2","SARS-CoV-2","GGTAGGATAGTTTTAT",1,30.89,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","E10L S41W T55D C61W G86Q",5
"lib2","SARS-CoV-2","GGTAGGATTTATCCTT",4,49,10.05,-0.78,0.08,2.16,1.13,0,"1 nonsynonymous","K26G",1
"lib2","SARS-CoV-2","GGTAGGATTTTTAACT",10,134.63,9.84,-0.99,0.04,2.96,1.02,0,">1 nonsynonymous","A42Q L60I E154W",3
"lib2","SARS-CoV-2","GGTAGGCAGTCCACCC",1,45.98,10.54,-0.3,0.04,2.88,1.12,0,">1 nonsynonymous","C61R V103I",2
"lib2","SARS-CoV-2","GGTAGGCGTGATCCGC",4,17.79,6.97,-3.86,0.5,1.5,1.07,0.07,">1 nonsynonymous","S43H D90F N110L N151K C158I",5
"lib2","SARS-CoV-2","GGTAGGTAAAATTATG",4,80.92,10.32,-0.51,0.05,2.94,1.05,0,">1 nonsynonymous","I2Y T85R G166A",3
"lib2","SARS-CoV-2","GGTAGGTGTTCTAAAA",1,38.44,9.33,-1.51,0.03,2.96,1.05,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","GGTAGTACATCAAACA",10,216.34,10.69,-0.15,0.02,2.95,1.04,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","GGTAGTATTAGATGAT",22,141.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106A D112I",2
"lib2","SARS-CoV-2","GGTAGTCAAATACTTA",1,18.07,10.68,-0.16,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTAGTCACGCAATAG",2,15.65,9.38,-1.45,0.1,1.89,1.04,0,"1 nonsynonymous","W106G",1
"lib2","SARS-CoV-2","GGTAGTCTACCAAACA",10,76.54,8.15,-2.68,0.18,1.5,1.08,0.01,">1 nonsynonymous","G51S R179K",2
"lib2","SARS-CoV-2","GGTAGTCTCTCCCATT",2,13.07,6,-4.84,2,3,1.15,0.02,">1 nonsynonymous","I2L F17R K48N C61A Y91I",5
"lib2","SARS-CoV-2","GGTAGTGAAATCGACC",8,80.91,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3P P7Y A14C C158L",4
"lib2","SARS-CoV-2","GGTAGTGAACAATGCA",3,43.13,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y50K P96L F134C Y143W K199S",5
"lib2","SARS-CoV-2","GGTAGTGATGATACAC",10,142.75,10.57,-0.26,0.03,3,1.01,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","GGTAGTGCGTTAATAA",5,72.44,8.78,-2.06,0.06,2.51,1.11,0,">1 nonsynonymous","T15S A22E N118I",3
"lib2","SARS-CoV-2","GGTAGTGCTTGGAGTT",1,9.13,10.33,-0.5,0.15,2.89,1.17,0.01,"synonymous","",0
"lib2","SARS-CoV-2","GGTAGTGGCACCAAAG",1,39.66,8.22,-2.61,0.22,1.51,1.13,0.02,">1 nonsynonymous","F12D V37F V103I N110L",4
"lib2","SARS-CoV-2","GGTAGTTAGACCTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N24P G86* G155S G174C",4
"lib2","SARS-CoV-2","GGTAGTTGGGCTATCC",4,37.59,10.33,-0.51,0.08,2.84,1.04,0,">1 nonsynonymous","D98F E141K",2
"lib2","SARS-CoV-2","GGTAGTTTTTCGGGTC",3,7.49,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D98Q V103P S200F",3
"lib2","SARS-CoV-2","GGTATAAAAAAACGAT",4,39.72,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","R73M P161F",2
"lib2","SARS-CoV-2","GGTATAAAAAGGGTTC",6,142.1,10.25,-0.59,0.03,2.91,1.07,0,">1 nonsynonymous","N110P P169S",2
"lib2","SARS-CoV-2","GGTATAAAATCGATAA",5,538.33,10.76,-0.07,0.03,2.94,1.08,0,">1 nonsynonymous","Y35V T100I L131V",3
"lib2","SARS-CoV-2","GGTATAAAATTTGGAG",1,88.04,10.93,0.09,0.06,2.92,1.09,0,">1 nonsynonymous","S36A V173K",2
"lib2","SARS-CoV-2","GGTATAAACTTCTACG",5,23.44,6.2,-4.64,0.45,3,1.16,0.01,">1 nonsynonymous","L5R N24H I80T P82L",4
"lib2","SARS-CoV-2","GGTATAACATCACCCA",7,61.49,8.65,-2.19,0.11,2.92,1.07,0,">1 nonsynonymous","V52L Y143E",2
"lib2","SARS-CoV-2","GGTATACAAACCAGGA",5,37.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R127C E135L",2
"lib2","SARS-CoV-2","GGTATACATAAAAAGG",1,86.14,10.59,-0.25,0.04,2.97,1.04,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","GGTATAGAAACAACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L G51W N107R F156Y Q176V F185H",6
"lib2","SARS-CoV-2","GGTATAGATTTTAAAA",2,1.27,NA,NA,NA,NA,NA,NA,"stop","V37G F62T N110M G146* G152L T170L",6
"lib2","SARS-CoV-2","GGTATAGCATACCTAC",4,94.07,8.14,-2.7,0.16,1.55,1.09,0.01,">1 nonsynonymous","P7S W23T S29Y K56Q",4
"lib2","SARS-CoV-2","GGTATAGCGAAAAGAC",2,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L P161L N171S",3
"lib2","SARS-CoV-2","GGTATAGGAAACTTCC",1,3.7,NA,NA,NA,NA,NA,NA,"stop","Y123* G152V",2
"lib2","SARS-CoV-2","GGTATAGGGCCTAATA",4,13.77,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N64T V103K",2
"lib2","SARS-CoV-2","GGTATAGTGATTCCTT",1,1.1,NA,NA,NA,NA,NA,NA,"stop","T140*",1
"lib2","SARS-CoV-2","GGTATAGTTCATTAAC",5,115,10.08,-0.75,0.04,2.87,1.02,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","GGTATATACTAAGAAG",1,7.31,9.57,-1.27,0.41,1.52,1.04,0.02,">1 nonsynonymous","N1M T85E R136V V173N",4
"lib2","SARS-CoV-2","GGTATATATTTGTAAG",4,11.47,9.85,-0.99,0.15,2.41,1,0.01,">1 nonsynonymous","D34N S41L A67Y",3
"lib2","SARS-CoV-2","GGTATATCGTCCAATA",15,119.33,8.07,-2.77,0.16,1.5,1.07,0.01,">1 nonsynonymous","L5F V37Y E76Y N171Q",4
"lib2","SARS-CoV-2","GGTATATGTAAACGGT",7,47.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S43D N64L V103S",3
"lib2","SARS-CoV-2","GGTATATGTTGTAAAG",4,71.62,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y119P P161R",2
"lib2","SARS-CoV-2","GGTATATTCACTGAGC",4,12.61,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","F8V W23R F47V G172A",4
"lib2","SARS-CoV-2","GGTATATTTCTATGAT",6,23.52,8.55,-2.28,0.28,1.5,1.09,0.05,">1 nonsynonymous","G9R C61Q F167Q",3
"lib2","SARS-CoV-2","GGTATATTTGAGAACC",4,5.82,NA,NA,NA,NA,NA,0.34,"1 nonsynonymous","I72Y",1
"lib2","SARS-CoV-2","GGTATCAGGATAGCCT",1,6.92,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V20K S43I V77T I88Q K94R",5
"lib2","SARS-CoV-2","GGTATCAGTTAGACGG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","K87G Y93S F99S E154* P169N",5
"lib2","SARS-CoV-2","GGTATCAGTTGCATTA",6,59.19,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K56T Y93M Q168E Q176L",4
"lib2","SARS-CoV-2","GGTATCATCGGCAATT",2,0.23,NA,NA,NA,NA,NA,NA,"stop","T15V N120I G146* N157T",4
"lib2","SARS-CoV-2","GGTATCATGAAAAACC",4,38.34,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N64I V103T S108Y Y143M",4
"lib2","SARS-CoV-2","GGTATCCAGCCCATCA",5,42.4,7.62,-3.22,0.31,1.5,1.11,0.04,">1 nonsynonymous","D90F N107D S129L F160Y",4
"lib2","SARS-CoV-2","GGTATCCATAACAAGC",2,39.27,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S19V R25T G51V",3
"lib2","SARS-CoV-2","GGTATCCGGTTTCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66A T100P T201*",3
"lib2","SARS-CoV-2","GGTATCCTCACCACTA",4,250.13,8.79,-2.05,0.12,1.68,1.16,0,">1 nonsynonymous","D90H Y178I",2
"lib2","SARS-CoV-2","GGTATCGAAACCGGGT",8,79.42,10.5,-0.34,0.06,2.86,1.05,0,">1 nonsynonymous","I2S E10L",2
"lib2","SARS-CoV-2","GGTATGAAAAGACATA",12,151.76,9.56,-1.28,0.03,2.91,1.05,0,">1 nonsynonymous","D59Q D98T N151K T170M",4
"lib2","SARS-CoV-2","GGTATGAAACAGTTGC",14,105.14,8.95,-1.89,0.32,1.5,1,0.04,">1 nonsynonymous","W106Q I138P P149T",3
"lib2","SARS-CoV-2","GGTATGAGTGCTTAGA",9,88.31,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14D T15G R25G K128I T201G",5
"lib2","SARS-CoV-2","GGTATGCGACCATCCA",3,12.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E R179A",2
"lib2","SARS-CoV-2","GGTATGGAAGGTGGTA",2,27.94,10.88,0.04,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTATGGAATATGAAT",4,26.58,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L5N E10K V181E",3
"lib2","SARS-CoV-2","GGTATGGCTTAGTATA",12,146.13,10.58,-0.25,0.04,2.83,1.1,0,">1 nonsynonymous","I104V S139K",2
"lib2","SARS-CoV-2","GGTATGGTACATGAAT",3,53.48,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S43V C61T D97F N157Y Q176T",5
"lib2","SARS-CoV-2","GGTATGTACCGTATCT",7,51.14,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V37S W106K R124S L131T",4
"lib2","SARS-CoV-2","GGTATGTATCCTGTCA",5,55.63,6,-4.84,1.16,1.5,1.23,0.02,">1 nonsynonymous","P96T S113A F126M N157T",4
"lib2","SARS-CoV-2","GGTATGTCCTTGACAA",7,60.09,10.54,-0.29,0.04,2.93,1.02,0,">1 nonsynonymous","E10L T55Q T100K",3
"lib2","SARS-CoV-2","GGTATGTTGAGTAATA",3,63.88,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K94M T100R G116S N157C F167N Q176L T201A",7
"lib2","SARS-CoV-2","GGTATTAAAAATGCTT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7A W23C P149K",3
"lib2","SARS-CoV-2","GGTATTACTATTAGCA",4,96.81,10,-0.83,0.06,2.77,1.06,0,">1 nonsynonymous","A33T S45N V115E T148F",4
"lib2","SARS-CoV-2","GGTATTATACCAAACG",4,62.94,9.47,-1.37,0.06,1.92,1.08,0,">1 nonsynonymous","F12A P149M",2
"lib2","SARS-CoV-2","GGTATTATGAAAATCC",2,31.21,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y21I Y91I A105K P169T",4
"lib2","SARS-CoV-2","GGTATTATTGCTGGCA",1,41.67,10.66,-0.18,0.04,2.85,1.14,0,"1 nonsynonymous","N64C",1
"lib2","SARS-CoV-2","GGTATTATTTCACAAT",2,14.05,6.66,-4.18,0.48,1.73,1.15,0.02,">1 nonsynonymous","I88W S147F",2
"lib2","SARS-CoV-2","GGTATTCAGACTTGTT",7,103.04,10,-0.83,0.06,2.82,1.03,0,"1 nonsynonymous","C6P",1
"lib2","SARS-CoV-2","GGTATTCCAACTTTTG",1,33.47,10.93,0.09,0.08,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTATTCCACCTTAGT",1,22.46,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S19P Y121L V182H",3
"lib2","SARS-CoV-2","GGTATTCCGCCACAAC",1,11.81,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","R73L I104F Y143R Y178F",4
"lib2","SARS-CoV-2","GGTATTCCTAGAGCCT",3,32.01,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3L T55I Y91L T100P P133S V153M T201Q",7
"lib2","SARS-CoV-2","GGTATTCCTTAAAACA",1,10.59,11.05,0.21,0.08,2.99,1,0,"1 nonsynonymous","D97A",1
"lib2","SARS-CoV-2","GGTATTCTGGAATATA",2,46.03,10.04,-0.79,0.03,2.91,1.07,0,">1 nonsynonymous","K94R F156K",2
"lib2","SARS-CoV-2","GGTATTGGATAGTAAC",8,20.96,9.07,-1.76,0.41,1.5,1,0.07,">1 nonsynonymous","I2T G83S L95E T148H V182D",5
"lib2","SARS-CoV-2","GGTATTGTAATGAAGC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGTATTGTTGTGCCGC",2,8.06,7.65,-3.18,0.35,1.5,1.01,0.04,">1 nonsynonymous","N1Y K56S N157L V182P",4
"lib2","SARS-CoV-2","GGTATTTAACAGCGCA",2,18.07,9.94,-0.9,0.14,2.08,1,0.01,">1 nonsynonymous","N4A V37W F44T A81E L95I",5
"lib2","SARS-CoV-2","GGTATTTATACGCCAG",6,74.33,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F44D F62Q Y93I A105M L122V G172F Y178C",7
"lib2","SARS-CoV-2","GGTATTTTAACAAACC",7,103.58,10.2,-0.64,0.05,2.89,1,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","GGTCAAAAATGCTTAT",4,10.49,6,-4.84,1.4,3,1.08,0.03,">1 nonsynonymous","C61G D90R P96L V103K",4
"lib2","SARS-CoV-2","GGTCAAAACAGATAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L V77N Y178I",3
"lib2","SARS-CoV-2","GGTCAAAACGATGCAA",3,39.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F44I E76N Y159V",3
"lib2","SARS-CoV-2","GGTCAAAACTATAGAA",4,23.99,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13L W23L Y39E",3
"lib2","SARS-CoV-2","GGTCAAAAGCGCAAGC",2,39.01,10.82,-0.02,0.06,3,1.02,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","GGTCAAAATCACGGCA",15,319.77,8.11,-2.72,0.08,1.55,1.1,0,">1 nonsynonymous","S41R I138R T148F F156L Y178T",5
"lib2","SARS-CoV-2","GGTCAAACAAGAATCC",2,0.46,NA,NA,NA,NA,NA,NA,"stop","P7* T46Y G101N",3
"lib2","SARS-CoV-2","GGTCAAAGGAAAACGT",3,37,9.59,-1.24,0.17,1.7,1.04,0.01,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","GGTCAAAGTTAAGCAA",9,9.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6D S29V C49Y Y91H S139M C150K L162C F185N A190S",9
"lib2","SARS-CoV-2","GGTCAACAACTAAACT",1,55.05,10.81,-0.03,0.06,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTCAACCGCCCATTC",2,22.58,9.26,-1.57,0.12,2.42,1.05,0.01,">1 nonsynonymous","I138L Y165L",2
"lib2","SARS-CoV-2","GGTCAACCTCGACAAG",3,24.96,10.83,0,0.1,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTCAACGCTTAAAAG",11,214.96,10.82,-0.02,0.04,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTCAACGGAGAAGCT",7,93,8.7,-2.13,0.07,2.75,1.1,0,">1 nonsynonymous","N107A E141D Q168T",3
"lib2","SARS-CoV-2","GGTCAACTTGAAACCT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","V52* G166M",2
"lib2","SARS-CoV-2","GGTCAAGACTGACCTA",1,2.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L Y39Q D68M K94S V103S R136V F185N",7
"lib2","SARS-CoV-2","GGTCAAGTCAATTACC",1,7.18,10.67,-0.16,0.13,2.72,1.33,0.01,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GGTCAATACGACAACA",7,70.99,10.79,-0.04,0.05,2.99,1.04,0,">1 nonsynonymous","K26R L60Y I142L",3
"lib2","SARS-CoV-2","GGTCAATCAGATATAC",2,47.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2K S43I V71E P82D I88K Y119V E141M P197S",8
"lib2","SARS-CoV-2","GGTCAATGATTTTACG",1,0.57,NA,NA,NA,NA,NA,NA,"stop","I2Y S43* P133T",3
"lib2","SARS-CoV-2","GGTCAATTCTAGCTGG",6,68.5,6.93,-3.91,0.3,1.5,1.14,0.02,">1 nonsynonymous","A14I E135P",2
"lib2","SARS-CoV-2","GGTCACAAAGATAAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","V37W F62K L131*",3
"lib2","SARS-CoV-2","GGTCACAACAACAACC",12,0.63,NA,NA,NA,NA,NA,NA,"stop","T15L G101* G146L",3
"lib2","SARS-CoV-2","GGTCACAATTTGATAA",1,38.97,6,-4.84,2,3,1.24,0,">1 nonsynonymous","R25P P54T",2
"lib2","SARS-CoV-2","GGTCACACAGCAGTGC",5,35.7,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","G51I F99R A145R",3
"lib2","SARS-CoV-2","GGTCACAGCTTCCTAA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","F8* S53V L60D P96M",4
"lib2","SARS-CoV-2","GGTCACCACGATAATC",15,51.17,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","T15L T55H V71E N120V Y165K",5
"lib2","SARS-CoV-2","GGTCACCTTATAGTAC",7,3.26,NA,NA,NA,NA,NA,NA,"stop","S41* K56I F99L A105V",4
"lib2","SARS-CoV-2","GGTCACGATTTAGTTA",2,9.25,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","D34Y D68T I88M Y121M F134V Y165V",6
"lib2","SARS-CoV-2","GGTCACGCAGAACCAC",7,1.37,NA,NA,NA,NA,NA,NA,"stop","L5F Y35T F99* S129R",4
"lib2","SARS-CoV-2","GGTCACGTCTACCCCA",4,68.27,9.66,-1.17,0.18,2.1,1.25,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGTCACTAAGCAGAGT",2,26.11,10.68,-0.15,0.08,2.77,1.09,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","GGTCACTAGACACACC",8,163.77,10.8,-0.04,0.04,2.95,1.08,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","GGTCACTCGTAATTAA",4,14.98,6,-4.84,2,3,1.13,0,">1 nonsynonymous","K87M L95R L183W P197R",4
"lib2","SARS-CoV-2","GGTCACTTTGGATACG",4,16.64,9.68,-1.15,0.13,2.59,1.09,0.01,">1 nonsynonymous","E10C D97L L125M N151I",4
"lib2","SARS-CoV-2","GGTCAGACACAACCAT",2,25.42,10.42,-0.42,0.1,2.92,1.07,0,"1 nonsynonymous","T15G",1
"lib2","SARS-CoV-2","GGTCAGATAATATGAT",14,244.94,10.77,-0.06,0.03,2.95,1.04,0,">1 nonsynonymous","T3M N120Q V153M",3
"lib2","SARS-CoV-2","GGTCAGATTTCCCAAT",5,14.12,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","A14F T55M S69A T140L G146D",5
"lib2","SARS-CoV-2","GGTCAGCGTTTGCTAT",5,0.26,NA,NA,NA,NA,NA,NA,"stop","A14* N40L I72F P82I",4
"lib2","SARS-CoV-2","GGTCAGGAACAGGACT",9,140.75,10.6,-0.23,0.03,2.85,1.09,0,">1 nonsynonymous","Y39C D98N P149G",3
"lib2","SARS-CoV-2","GGTCAGGTACCTGACT",7,55.27,10.53,-0.31,0.05,2.99,1.03,0,">1 nonsynonymous","S29G D97G",2
"lib2","SARS-CoV-2","GGTCAGTCGGTTTCTT",4,19.93,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y35T V65N I142T N157L",4
"lib2","SARS-CoV-2","GGTCAGTTCAATTTTT",14,235.1,9.39,-1.45,0.04,2.91,1.09,0,">1 nonsynonymous","D97Q Y119H A192E",3
"lib2","SARS-CoV-2","GGTCAGTTGAATTAAT",6,168.45,10.19,-0.64,0.02,2.85,1.06,0,">1 nonsynonymous","F44L Q84G H189L",3
"lib2","SARS-CoV-2","GGTCATAAAACATATA",6,67.49,10.81,-0.03,0.03,2.95,1.07,0,">1 nonsynonymous","T55R K128R",2
"lib2","SARS-CoV-2","GGTCATAAACACTTAA",4,22.76,10.62,-0.22,0.05,2.93,1.09,0,">1 nonsynonymous","G9D S41W V153D",3
"lib2","SARS-CoV-2","GGTCATAAAGTTGCCA",5,114.15,9.17,-1.67,0.07,2.87,1.08,0,"1 nonsynonymous","T170C",1
"lib2","SARS-CoV-2","GGTCATAATAAAGACC",6,79.24,10.16,-0.67,0.06,2.53,1.02,0,">1 nonsynonymous","N4L R16K Y91N",3
"lib2","SARS-CoV-2","GGTCATAATCGGGACG",11,91.34,6.29,-4.55,0.44,1.5,1.15,0.01,">1 nonsynonymous","G86L N120I",2
"lib2","SARS-CoV-2","GGTCATACATTAGCTT",11,62.39,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A89Y Q144I Q176K",3
"lib2","SARS-CoV-2","GGTCATATATGGCCTA",8,76.5,10.48,-0.36,0.05,2.78,1.04,0,">1 nonsynonymous","D98E V103I",2
"lib2","SARS-CoV-2","GGTCATCAATCAAGAG",8,61.4,6,-4.84,2,2.46,1.17,0.01,">1 nonsynonymous","Y66G G74C D90S",3
"lib2","SARS-CoV-2","GGTCATCCTGAGAAAG",2,33.67,10.79,-0.05,0.06,2.93,1.08,0,">1 nonsynonymous","F8L T15S",2
"lib2","SARS-CoV-2","GGTCATCGAACTTTTT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","I2* D98N",2
"lib2","SARS-CoV-2","GGTCATCTGACTCATG",6,14.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T63S A89S P96F",3
"lib2","SARS-CoV-2","GGTCATCTTCAAACCC",4,119.31,10.33,-0.51,0.03,2.95,1.07,0,"1 nonsynonymous","I142P",1
"lib2","SARS-CoV-2","GGTCATGATAGTCCTG",5,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92M N107G I142W",3
"lib2","SARS-CoV-2","GGTCATGCAAAGTGTG",1,75.29,9.65,-1.19,0.1,2.32,1.03,0,">1 nonsynonymous","E10L C31N",2
"lib2","SARS-CoV-2","GGTCATGCAATTTGCA",3,2.07,NA,NA,NA,NA,NA,NA,"stop","S45I L57N L122* P149L Y175H",5
"lib2","SARS-CoV-2","GGTCATGCCGAGGCAG",2,0.74,NA,NA,NA,NA,NA,NA,"stop","N13A V37R P96* D112L",4
"lib2","SARS-CoV-2","GGTCATGGAGCGGATT",11,333.36,9.84,-0.99,0.06,2.36,1.04,0,">1 nonsynonymous","G9K D97S Y178S",3
"lib2","SARS-CoV-2","GGTCATTAATCTCCTT",11,153.26,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40I N58I A89C A190S",4
"lib2","SARS-CoV-2","GGTCATTGATAACCAC",4,3.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","GGTCCAAAAATGTCTA",3,5.19,NA,NA,NA,NA,NA,NA,"stop","E141A P149N P177*",3
"lib2","SARS-CoV-2","GGTCCAAAGAAGTCCT",7,65.24,10.31,-0.52,0.04,2.94,1.01,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","GGTCCAAATCATTTGT",20,282.4,10.25,-0.59,0.04,2.79,1.04,0,">1 nonsynonymous","P7L S139A",2
"lib2","SARS-CoV-2","GGTCCAACCTAAAAAA",3,68.75,9.72,-1.12,0.08,2.13,1.03,0,">1 nonsynonymous","G83W D97E G116R",3
"lib2","SARS-CoV-2","GGTCCAAGGTACCAAT",2,10.59,6.34,-4.49,1.09,1.5,1.29,0.05,">1 nonsynonymous","S45R Y93R G116K P149M",4
"lib2","SARS-CoV-2","GGTCCAATATTTAACT",4,15.83,8.7,-2.14,0.12,2,1.07,0.01,">1 nonsynonymous","F44H N107Q N151L T201L",4
"lib2","SARS-CoV-2","GGTCCAATCCGTCAAA",4,0.39,NA,NA,NA,NA,NA,NA,"stop","G9S W106L G166* Q176M",4
"lib2","SARS-CoV-2","GGTCCACAATGAGAAG",5,44.64,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","V20A Y50M",2
"lib2","SARS-CoV-2","GGTCCACAGCTGCCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","V20S D90Y Y121*",3
"lib2","SARS-CoV-2","GGTCCACCCCACCACT",1,7.93,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F17N V37Q N92M N130K Y159V",5
"lib2","SARS-CoV-2","GGTCCAGACATGAAAT",5,156.44,10.79,-0.05,0.04,2.95,1.07,0,">1 nonsynonymous","V65L F185Y",2
"lib2","SARS-CoV-2","GGTCCAGGACAATGAC",1,17.2,8.94,-1.89,0.21,2.45,1.26,0.01,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","GGTCCATACCAGTATC",1,15.42,11.01,0.17,0.1,2.95,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGTCCATGCATACCAT",2,12.52,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I28M R73M D90S F167T",4
"lib2","SARS-CoV-2","GGTCCCCTGAACCTAA",7,3.84,NA,NA,NA,NA,NA,NA,"stop","A14E D34Y D90W Y123* K132S E141S",6
"lib2","SARS-CoV-2","GGTCCCGCCACGCTTT",9,76.26,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F8L S19W D34L",3
"lib2","SARS-CoV-2","GGTCCCGGCCCCAAAT",4,2.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S Y91F V103R",3
"lib2","SARS-CoV-2","GGTCCGAAACATTATA",3,43.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","K94H K114H R124N",3
"lib2","SARS-CoV-2","GGTCCGAGATTTGAAT",10,78,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G9A S41V Y50D G172L H189T",5
"lib2","SARS-CoV-2","GGTCCGATACAACGAT",2,53.62,10.68,-0.16,0.04,2.87,1.12,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","GGTCCGGATCCGCGCC",2,38.97,10.08,-0.76,0.1,2.87,1,0.01,">1 nonsynonymous","A14V N30R C61W L122Q",4
"lib2","SARS-CoV-2","GGTCCGTGCAATTAGA",3,122.9,9.52,-1.32,0.07,2.01,1.05,0,">1 nonsynonymous","Y39N W106V T201S",3
"lib2","SARS-CoV-2","GGTCCGTTGAGTAAAT",11,55.73,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C61I G86P N120F S129M P197Q",5
"lib2","SARS-CoV-2","GGTCCGTTTCTGTCAC",3,68.24,10.82,-0.02,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTCCTAACATACGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28G A105N",2
"lib2","SARS-CoV-2","GGTCCTACAAACGGAT",5,30.04,9.84,-1,0.13,2.17,1,0.01,">1 nonsynonymous","V71T G83D",2
"lib2","SARS-CoV-2","GGTCCTACCTATAGGA",3,44.51,9.78,-1.06,0.07,2.79,1.11,0,">1 nonsynonymous","S41N R73S E135T",3
"lib2","SARS-CoV-2","GGTCCTCCTAATTCAA",3,20.58,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L38F K94G R127N",3
"lib2","SARS-CoV-2","GGTCCTGAACGAGGCT",2,56.87,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","GGTCCTGACCACATCA",2,1.15,NA,NA,NA,NA,NA,NA,"stop","Y35* P54R Q176L",3
"lib2","SARS-CoV-2","GGTCCTGCAGTAGAGC",21,417.62,10.85,0.01,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTCCTGCATATTCCC",2,45.06,6.14,-4.69,0.86,1.5,1.22,0.02,">1 nonsynonymous","C6E Y119N F167K",3
"lib2","SARS-CoV-2","GGTCCTGCCCTAAGCA",1,33.02,10.32,-0.52,0.08,2.6,1.07,0,">1 nonsynonymous","P54G S139M S147P",3
"lib2","SARS-CoV-2","GGTCCTGGAATAACAC",3,45.54,9.17,-1.67,0.21,1.5,1.01,0.02,">1 nonsynonymous","T46L D90Y D97N P149G F160V",5
"lib2","SARS-CoV-2","GGTCCTGTCAGTCCTA",3,0.82,NA,NA,NA,NA,NA,NA,"stop","F12V D68K N107* N120V",4
"lib2","SARS-CoV-2","GGTCCTTTAAAATCAA",2,45.94,7.65,-3.19,0.24,1.5,1.09,0.02,">1 nonsynonymous","S19E Y39S K128E A145G",4
"lib2","SARS-CoV-2","GGTCGAAAGTGCCCCT",6,74.38,10.77,-0.06,0.06,2.89,1.14,0,"1 nonsynonymous","H189Y",1
"lib2","SARS-CoV-2","GGTCGAACAACCCTAC",2,72.84,10.39,-0.44,0.04,2.86,1.01,0,">1 nonsynonymous","T3R F8Y S29C V37L",4
"lib2","SARS-CoV-2","GGTCGAAGATTTTCAA",6,52.64,9.3,-1.53,0.06,2.88,1.15,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","GGTCGAATAAGTTGCT",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99L V181M",2
"lib2","SARS-CoV-2","GGTCGACTTTACGCTG",11,13.04,NA,NA,NA,NA,NA,NA,"stop","N1H C6K N13I K87E L122K G146*",6
"lib2","SARS-CoV-2","GGTCGAGAAAATGCTC",5,17.9,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V65G L95P Y121A",3
"lib2","SARS-CoV-2","GGTCGAGACGTTTATA",2,30.52,9.99,-0.85,0.05,2.84,1.09,0,">1 nonsynonymous","L5R Y35L Y91V F134W",4
"lib2","SARS-CoV-2","GGTCGATGTGCCAAAT",1,12.55,6,-4.84,2,1.5,1.13,0.07,">1 nonsynonymous","N1T A18L S19Y W106R T170K",5
"lib2","SARS-CoV-2","GGTCGCAACACATGAT",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F F99K",2
"lib2","SARS-CoV-2","GGTCGCGGACTGTAGA",8,71.07,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","Y93S G116L P133R V153M",4
"lib2","SARS-CoV-2","GGTCGCTGAAATGAAG",6,0.32,NA,NA,NA,NA,NA,NA,"stop","F8W Q84P K114V N157D R179*",5
"lib2","SARS-CoV-2","GGTCGGAAAGTACACA",4,82.84,10.78,-0.06,0.04,2.96,1.01,0,"1 nonsynonymous","A14Q",1
"lib2","SARS-CoV-2","GGTCGGCTCCGACTTC",1,5.91,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A14T V37W C49L Q84Y L95P",5
"lib2","SARS-CoV-2","GGTCGGTCATAACAGT",1,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R C31L F99N Y175I",4
"lib2","SARS-CoV-2","GGTCGTACAAACTTGG",6,23.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A22T A33L F99N",3
"lib2","SARS-CoV-2","GGTCGTACAAAGATAA",5,0.42,NA,NA,NA,NA,NA,NA,"stop","I104E S129* Y159T F167V",4
"lib2","SARS-CoV-2","GGTCGTACTGAAAAAG",3,14.68,6.23,-4.6,1.01,1.5,1.1,0.06,">1 nonsynonymous","C49R R78I L187M",3
"lib2","SARS-CoV-2","GGTCGTAGAGATTTGG",2,37.31,9.71,-1.12,0.12,2.25,1.12,0.01,">1 nonsynonymous","T63S L111Y V173S",3
"lib2","SARS-CoV-2","GGTCGTATATCGATCT",7,126.08,10.92,0.09,0.06,2.92,1.1,0,"1 nonsynonymous","N130K",1
"lib2","SARS-CoV-2","GGTCGTTAAAGCCATG",2,29.27,10.82,-0.01,0.05,2.88,1.13,0,"1 nonsynonymous","A18N",1
"lib2","SARS-CoV-2","GGTCGTTTATAATGCC",5,0,NA,NA,NA,NA,NA,NA,"stop","N58* L125T S200K",3
"lib2","SARS-CoV-2","GGTCTAAAACGCTTCA",1,6.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10Y P82R W106M P161G",4
"lib2","SARS-CoV-2","GGTCTAAATCCTCTAT",6,1.72,NA,NA,NA,NA,NA,NA,"stop","L122* E141*",2
"lib2","SARS-CoV-2","GGTCTAAATTATAACG",9,52.79,9.61,-1.23,0.17,1.76,1.2,0.01,">1 nonsynonymous","F17I Y35N",2
"lib2","SARS-CoV-2","GGTCTAACGTATCCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","GGTCTAAGATCTCTCT",10,165.78,8.35,-2.49,0.11,2.53,1.09,0,">1 nonsynonymous","D90A N157T",2
"lib2","SARS-CoV-2","GGTCTAATATATCTTC",7,1.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1D",1
"lib2","SARS-CoV-2","GGTCTACACGGCACAT",6,26.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6L V20H C49H Y91W",4
"lib2","SARS-CoV-2","GGTCTACAGTATAGTT",8,95.7,6,-4.84,2,2.74,1.22,0,">1 nonsynonymous","G9R G51C Y66W V71G C158F",5
"lib2","SARS-CoV-2","GGTCTACTACAGACCA",8,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97L V103N Q176L P197M",4
"lib2","SARS-CoV-2","GGTCTACTATTACAAA",3,49.05,10.43,-0.4,0.09,2.84,1.07,0.01,">1 nonsynonymous","A42F Y178W",2
"lib2","SARS-CoV-2","GGTCTAGCTGACAATT",17,232.11,10.09,-0.74,0.04,2.53,1.05,0,">1 nonsynonymous","D34N K56M D90W",3
"lib2","SARS-CoV-2","GGTCTAGTTAACTGAG",2,12.08,6,-4.84,2,3,1.29,0.02,">1 nonsynonymous","N30R S36C N157Y P169H V173P V180C",6
"lib2","SARS-CoV-2","GGTCTATCCTCCCGCG",3,10.33,10.24,-0.59,0.11,2.88,1.05,0.01,">1 nonsynonymous","G155H T201K",2
"lib2","SARS-CoV-2","GGTCTCAGTCTACCCG",2,24.38,10.77,-0.07,0.07,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTCTCATGGTCAAAA",3,41.08,9.69,-1.15,0.09,2.01,1.05,0,">1 nonsynonymous","F17I S139R",2
"lib2","SARS-CoV-2","GGTCTCTAGTATAGAT",6,3.46,NA,NA,NA,NA,NA,NA,"stop","N13G V32* K48I D97M Y123G",5
"lib2","SARS-CoV-2","GGTCTCTATAAAACGT",9,36.34,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A18L A67S P96G",3
"lib2","SARS-CoV-2","GGTCTCTATTCTGCCA",6,184.1,9.55,-1.28,0.03,2.9,1.06,0,">1 nonsynonymous","L5M T63N Y119T",3
"lib2","SARS-CoV-2","GGTCTGAAAGGTTAAA",7,285.44,10.24,-0.6,0.05,2.71,1.08,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","GGTCTGCCGCGGGCTT",4,71.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K87D D97G Y159W G174Y",4
"lib2","SARS-CoV-2","GGTCTGCGACCGACTA",6,128.93,10.15,-0.69,0.03,2.99,1,0,">1 nonsynonymous","C31Q S43I",2
"lib2","SARS-CoV-2","GGTCTGTACGTCTCAC",2,16.56,9.78,-1.05,0.3,1.84,1.04,0.03,">1 nonsynonymous","W106Y P161A",2
"lib2","SARS-CoV-2","GGTCTTACCCGTACAC",8,1.9,NA,NA,NA,NA,NA,NA,"stop","G86F F99* I104F",3
"lib2","SARS-CoV-2","GGTCTTCAAAAGCTCA",3,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C C61G R127W",3
"lib2","SARS-CoV-2","GGTCTTCAACCTTGTT",5,30.47,6,-4.84,0.69,1.5,1.09,0.01,">1 nonsynonymous","S45I F62T Y93R I138R",4
"lib2","SARS-CoV-2","GGTCTTCACTATCAGG",3,1.17,NA,NA,NA,NA,NA,NA,"stop","R16S V37S P54T P149* T201W",5
"lib2","SARS-CoV-2","GGTCTTCTAGTGAAAT",3,31.44,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","C61K D68W Q84I",3
"lib2","SARS-CoV-2","GGTCTTGACATTTCTA",6,24.23,8.74,-2.09,0.13,1.92,1,0.01,">1 nonsynonymous","N107T I138Q",2
"lib2","SARS-CoV-2","GGTCTTGACGTAATTG",5,39.68,9.98,-0.86,0.07,2.74,1.06,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GGTCTTGCGATCCAGT",1,27.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C E141R P149R",3
"lib2","SARS-CoV-2","GGTCTTTACTAAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T100* W106* K114D",3
"lib2","SARS-CoV-2","GGTCTTTACTGAAGTC",8,69.61,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9I R25S F44L N110F",4
"lib2","SARS-CoV-2","GGTGAAAGTGTCTTAT",7,0.8,NA,NA,NA,NA,NA,NA,"stop","C6R K87S T100* G117M V153*",5
"lib2","SARS-CoV-2","GGTGAAATCTACCGTT",4,47.08,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A33K L131S Y175N",3
"lib2","SARS-CoV-2","GGTGAACAAGACAACT",2,17.81,10.79,-0.05,0.07,2.98,1.05,0,">1 nonsynonymous","G9Q Y91F",2
"lib2","SARS-CoV-2","GGTGAACAAGGTACCG",4,36.59,10.16,-0.68,0.08,2.77,1.03,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","GGTGAACCAGGAAGGT",11,127.78,9.47,-1.37,0.09,1.8,1.14,0,">1 nonsynonymous","A33G A67S Q163S",3
"lib2","SARS-CoV-2","GGTGAAGAAAATCAAG",12,101.08,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N13R G74R Y159S",3
"lib2","SARS-CoV-2","GGTGAAGAGAACTCGA",3,0.95,NA,NA,NA,NA,NA,NA,"stop","D75F E76* L95A R127A R136T F156L",6
"lib2","SARS-CoV-2","GGTGAAGCTGCATGTT",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L D34T",2
"lib2","SARS-CoV-2","GGTGAAGGCACACATG",2,7.83,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y91T V173T",2
"lib2","SARS-CoV-2","GGTGAAGGCTACAAAA",2,36.22,10.72,-0.12,0.08,2.9,1.13,0,"1 nonsynonymous","A33F",1
"lib2","SARS-CoV-2","GGTGAAGTCTCCCCCA",6,145.1,10.56,-0.28,0.06,2.83,1.07,0,"1 nonsynonymous","K128W",1
"lib2","SARS-CoV-2","GGTGAATAACCTTCAT",2,34.46,6,-4.84,2,3,1.22,0,">1 nonsynonymous","L60R V77R A81T D97R",4
"lib2","SARS-CoV-2","GGTGAATAATAATTCT",7,400.27,7.6,-3.23,0.15,1.5,1.1,0.01,">1 nonsynonymous","V37K F44Q D75T S129A A145E K198R",6
"lib2","SARS-CoV-2","GGTGAATCGCTTAAAC",8,79.38,10.2,-0.63,0.04,2.7,1,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","GGTGAATTACTGAGTT",2,12.7,9.95,-0.89,0.14,2.51,1.23,0.01,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","GGTGACAAATACAGCT",7,0.24,NA,NA,NA,NA,NA,NA,"stop","Y35* G152C",2
"lib2","SARS-CoV-2","GGTGACAATTCAAAGA",4,26.34,6.76,-4.07,0.5,1.5,1.27,0.05,">1 nonsynonymous","R25K K48T E141T S200Y",4
"lib2","SARS-CoV-2","GGTGACACCGTCCATC",3,98.11,8.77,-2.06,0.05,2.76,1.1,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","GGTGACACGAGGGTAA",3,15.41,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F62L C102D",2
"lib2","SARS-CoV-2","GGTGACAGGTTGTCCC",4,93.98,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K48H K128T C150Y",3
"lib2","SARS-CoV-2","GGTGACATGATTAGAG",1,22.48,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N40R I80F E154S T201G",4
"lib2","SARS-CoV-2","GGTGACATGCCGCAAC",5,1.25,NA,NA,NA,NA,NA,NA,"stop","Y21*",1
"lib2","SARS-CoV-2","GGTGACCAGCAATAGC",1,49.47,10.7,-0.13,0.03,2.95,1.06,0,"1 nonsynonymous","G116P",1
"lib2","SARS-CoV-2","GGTGACCATCAGGCAG",5,131.46,10.8,-0.03,0.05,2.95,1.08,0,">1 nonsynonymous","A42R K114M",2
"lib2","SARS-CoV-2","GGTGACCCAATATGTT",3,29.85,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","C150N F167L",2
"lib2","SARS-CoV-2","GGTGACCCGGACTACT",3,1.12,NA,NA,NA,NA,NA,NA,"stop","V77* G155I",2
"lib2","SARS-CoV-2","GGTGACGAAATAGGCA",7,2.92,NA,NA,NA,NA,NA,NA,"stop","Y21R Y50* N64G G83S S184K",5
"lib2","SARS-CoV-2","GGTGACGTACCCGATT",3,27.92,6,-4.84,2,1.5,1.29,0.08,">1 nonsynonymous","Q84F G146T E154G R179Q",4
"lib2","SARS-CoV-2","GGTGACTAGACGCTAA",3,25.82,8.75,-2.09,0.43,1.5,1,0.06,"1 nonsynonymous","R127V",1
"lib2","SARS-CoV-2","GGTGACTCATAGAAAA",3,34.29,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","D97K A105E",2
"lib2","SARS-CoV-2","GGTGACTGTGACCAAG",3,12.82,6,-4.84,2,3,1.03,0,">1 nonsynonymous","R127L C158A V173L",3
"lib2","SARS-CoV-2","GGTGAGAACAAATGAC",5,29.32,9.96,-0.88,0.37,1.5,1,0.06,">1 nonsynonymous","I2A T55W W106E",3
"lib2","SARS-CoV-2","GGTGAGAAGTACTATA",4,9.84,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","C49S Q79T R127V P149T P177M K198T",6
"lib2","SARS-CoV-2","GGTGAGACCACCCCAA",10,5.47,NA,NA,NA,NA,NA,NA,"stop","R16S K26* Y50M N120T T201M",5
"lib2","SARS-CoV-2","GGTGAGCGCAAGCGTG",7,0.16,NA,NA,NA,NA,NA,NA,"stop","V71L A89I C102* N118Y",4
"lib2","SARS-CoV-2","GGTGAGGAAGTACAAA",3,19.93,7.33,-3.5,0.39,1.5,1.02,0.04,">1 nonsynonymous","C158T C195F",2
"lib2","SARS-CoV-2","GGTGAGGATGTTCCTA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84G G101R N130S V181G V182L",5
"lib2","SARS-CoV-2","GGTGAGGTAATTATCG",5,109.83,9.62,-1.21,0.08,2.01,1.04,0,">1 nonsynonymous","L5D G51N D90Y Y178M",4
"lib2","SARS-CoV-2","GGTGAGTAGCATTCTA",6,123.18,10.21,-0.63,0.02,2.95,1.01,0,">1 nonsynonymous","F8I L60R C195G",3
"lib2","SARS-CoV-2","GGTGAGTCCGGGGTCC",2,10.91,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","G101N",1
"lib2","SARS-CoV-2","GGTGAGTTGTCCAACA",1,61.24,10.05,-0.79,0.08,2.77,1.07,0,">1 nonsynonymous","C6L S147P",2
"lib2","SARS-CoV-2","GGTGATAAAATGAAAG",6,12.81,6.57,-4.26,0.77,1.5,1.08,0.06,">1 nonsynonymous","V103S E141R",2
"lib2","SARS-CoV-2","GGTGATAAGCAATATG",5,79.3,10.93,0.1,0.12,2.57,1.06,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","GGTGATAATAAACAAC",6,37.89,9.55,-1.29,0.2,1.52,1.07,0.02,">1 nonsynonymous","K94V K128L",2
"lib2","SARS-CoV-2","GGTGATACTATTCCCA",3,19.9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3W G9L N58F F99Q S139Y",5
"lib2","SARS-CoV-2","GGTGATATTCTAGCTG",1,7.86,10.11,-0.73,0.15,2.92,1,0.02,">1 nonsynonymous","G116C L187N",2
"lib2","SARS-CoV-2","GGTGATCAAATAACAT",1,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N F185V",2
"lib2","SARS-CoV-2","GGTGATCCAAATGACC",14,143.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10F A89F P133L",3
"lib2","SARS-CoV-2","GGTGATCCTCGATTAA",5,61.15,9.01,-1.83,0.17,2.58,1.34,0.01,">1 nonsynonymous","S69M P197A",2
"lib2","SARS-CoV-2","GGTGATGAAGCTAAGG",3,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47M V65K E154L Y178L",4
"lib2","SARS-CoV-2","GGTGATGAATTGGAAG",3,7.62,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","S41L C61D A81P A105G F126Q",5
"lib2","SARS-CoV-2","GGTGATGATGTCTCGA",8,129.29,8.95,-1.89,0.08,1.78,1.12,0,">1 nonsynonymous","Y50V G152E",2
"lib2","SARS-CoV-2","GGTGATGTAACAATGA",2,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T C49L K94L T170M",4
"lib2","SARS-CoV-2","GGTGATTGACACAAGG",7,1.59,NA,NA,NA,NA,NA,NA,"stop","G9L K128* R136S",3
"lib2","SARS-CoV-2","GGTGATTGACTGTGTC",4,71.14,9.19,-1.65,0.05,2.89,1.14,0,">1 nonsynonymous","S41G Y119T",2
"lib2","SARS-CoV-2","GGTGATTGCAGGCATA",1,14.65,10.21,-0.62,0.05,3,1,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","GGTGCAAAAATAAAAG",5,11.56,10.91,0.08,0.09,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCAAATGTACCAG",7,29.39,6,-4.84,2,3,1.06,0,">1 nonsynonymous","V20M G51S F99E P133G",4
"lib2","SARS-CoV-2","GGTGCAATTAACAAGA",3,50.92,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36K N107K L131R",3
"lib2","SARS-CoV-2","GGTGCACAAACACGGT",2,21.35,10.86,0.02,0.08,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCCATGCATCATT",3,3.16,NA,NA,NA,NA,NA,NA,"stop","S139V G146A T201*",3
"lib2","SARS-CoV-2","GGTGCCCACTGACACG",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59W D98V",2
"lib2","SARS-CoV-2","GGTGCCCGTTAGAGAT",1,10.3,10.42,-0.42,0.08,3,1,0,">1 nonsynonymous","A42R L60K F126L",3
"lib2","SARS-CoV-2","GGTGCCGAGGCCGTAG",1,78.87,10.48,-0.35,0.06,2.89,1.1,0,">1 nonsynonymous","V52Y L60E T148A",3
"lib2","SARS-CoV-2","GGTGCCTAACTTACGT",5,138.53,10.84,0,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCCTCGCAACATA",8,139.26,6.23,-4.61,0.38,1.5,1.12,0.01,">1 nonsynonymous","Y91F D97P G117S P133F N157S",5
"lib2","SARS-CoV-2","GGTGCGATTGCGATAC",2,25.29,10.03,-0.81,0.08,2.7,1,0,">1 nonsynonymous","F44G L122F E135T",3
"lib2","SARS-CoV-2","GGTGCGCATGGTACGT",4,14.78,9.04,-1.8,0.36,1.58,1.03,0.05,">1 nonsynonymous","V103K T201L",2
"lib2","SARS-CoV-2","GGTGCGCATTAACGAA",2,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119F Y178P",2
"lib2","SARS-CoV-2","GGTGCGCGAGGCCAGA",3,60.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136S Y159R",2
"lib2","SARS-CoV-2","GGTGCGTCTAAGGCAG",7,92.67,10.79,-0.04,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCGTCTAGGTACC",4,30.73,10.82,-0.02,0.12,2.77,1.19,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCTAAAATATTTT",3,32.16,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G51Q D59R G101S E141F",4
"lib2","SARS-CoV-2","GGTGCTAAATTCCACA",2,12.44,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45T D59F V71G T85L F134I Y143N",6
"lib2","SARS-CoV-2","GGTGCTAATAGGTTAC",1,72.1,10.82,-0.01,0.03,2.92,1.08,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","GGTGCTAATCTTATAT",8,107.33,9.3,-1.53,0.04,2.87,1.08,0,">1 nonsynonymous","T46D Y119K",2
"lib2","SARS-CoV-2","GGTGCTACAACTACCG",3,13.34,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T15E F47I A89L",3
"lib2","SARS-CoV-2","GGTGCTAGCTCTTCTT",8,132.32,9.77,-1.07,0.09,2.15,1.07,0,">1 nonsynonymous","A18L K132T",2
"lib2","SARS-CoV-2","GGTGCTAGGTTAACAA",8,38.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D F156C V180R",3
"lib2","SARS-CoV-2","GGTGCTATAGTCATAG",9,104.94,10.79,-0.04,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCTCATGGCCAGT",1,12.84,8.68,-2.15,0.15,2.78,1,0.01,">1 nonsynonymous","E135V G166R",2
"lib2","SARS-CoV-2","GGTGCTCCAATACGAA",6,0,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","GGTGCTCCACTAAGAC",3,82.02,10.12,-0.71,0.04,2.85,1.01,0,"1 nonsynonymous","C31W",1
"lib2","SARS-CoV-2","GGTGCTCTCTAGATAT",3,1.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","GGTGCTGACTAGCAAG",3,173.36,9.01,-1.82,0.09,2.45,1.07,0,">1 nonsynonymous","S41P G146R",2
"lib2","SARS-CoV-2","GGTGCTGATTATGTGA",1,16.79,10.78,-0.06,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGCTGCCAAAGTGG",9,12.59,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41Y F99S N120P F134Y",4
"lib2","SARS-CoV-2","GGTGCTTCCAATACAA",1,11.37,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N13Y G117E P149T Y165S",4
"lib2","SARS-CoV-2","GGTGCTTCTATATCTT",7,3.72,NA,NA,NA,NA,NA,NA,"stop","S45V Y91* F185Y",3
"lib2","SARS-CoV-2","GGTGCTTGAACCAAAT",3,102.98,6,-4.84,2,1.5,1.35,0.04,">1 nonsynonymous","A105Y R179M",2
"lib2","SARS-CoV-2","GGTGCTTGAGAAGTTG",14,156.61,8.63,-2.2,0.08,2.64,1.09,0,">1 nonsynonymous","F99W Y143C",2
"lib2","SARS-CoV-2","GGTGCTTGTAAGTTAT",4,126.15,9.45,-1.38,0.06,2.93,1.08,0,">1 nonsynonymous","D97T Y119G K128D",3
"lib2","SARS-CoV-2","GGTGCTTTAGAAAAAA",4,0.08,NA,NA,NA,NA,NA,NA,"stop","T55S L111S G146Q F167*",4
"lib2","SARS-CoV-2","GGTGGAAATTATCACC",1,14.62,8.21,-2.63,0.16,2.68,1.01,0.01,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","GGTGGAATAAACGCAT",25,285.68,6,-4.84,2,1.5,1.23,0,">1 nonsynonymous","T46F C150T L187Q",3
"lib2","SARS-CoV-2","GGTGGACAAAGTTAGT",1,22.66,10.81,-0.02,0.08,2.93,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGGACACCATGCAC",6,81.37,10.8,-0.03,0.05,2.94,1.09,0,">1 nonsynonymous","G51N C61S",2
"lib2","SARS-CoV-2","GGTGGACTGTTTTTCG",3,27.58,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A89N T140L P161C",3
"lib2","SARS-CoV-2","GGTGGAGAGTTTCATT",10,20.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86S K128E G172V V181R A190P",5
"lib2","SARS-CoV-2","GGTGGAGTACACAGAC",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S C61N D90S L122P G152P T201S",6
"lib2","SARS-CoV-2","GGTGGATAACCCAACT",13,43.18,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6N S41W P96R S113Y S184Y",5
"lib2","SARS-CoV-2","GGTGGATAGTATTACT",8,175.48,10.77,-0.06,0.03,2.87,1.14,0,">1 nonsynonymous","C61H N64T",2
"lib2","SARS-CoV-2","GGTGGATCGAATTCCA",3,52.75,10.89,0.06,0.06,2.96,1.04,0,">1 nonsynonymous","T3S T100C",2
"lib2","SARS-CoV-2","GGTGGATTTCATATAG",15,79.88,6,-4.84,2,1.5,1.21,0.04,"1 nonsynonymous","F99G",1
"lib2","SARS-CoV-2","GGTGGCACGACCAAAT",3,18.21,6,-4.84,2,1.5,1.09,0.05,">1 nonsynonymous","F99E K199G",2
"lib2","SARS-CoV-2","GGTGGCCACCAATTGT",13,148.11,6,-4.84,2,2.5,1.17,0,"1 nonsynonymous","L162P",1
"lib2","SARS-CoV-2","GGTGGCCTCTGAACGC",3,1.88,NA,NA,NA,NA,NA,NA,"stop","T3L V52Q I88F F99Y V103M K128Q Q144*",7
"lib2","SARS-CoV-2","GGTGGCGTCTACTCAA",1,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W G86L S113K P149L",4
"lib2","SARS-CoV-2","GGTGGCTATGAGACAA",18,242.84,9.18,-1.66,0.05,2.65,1.07,0,">1 nonsynonymous","L60R I142N T201I",3
"lib2","SARS-CoV-2","GGTGGCTCTATCTCGT",10,115.16,9.69,-1.15,0.04,2.85,1.03,0,">1 nonsynonymous","K48Q N107Q",2
"lib2","SARS-CoV-2","GGTGGGAATGAACTGC",3,23.34,9.36,-1.47,0.1,2.77,1.22,0,">1 nonsynonymous","K87D K128N E154Q",3
"lib2","SARS-CoV-2","GGTGGGAGTCATCAGT",13,64.67,6.03,-4.8,0.99,1.5,1.22,0.02,">1 nonsynonymous","P82S D90S N109P",3
"lib2","SARS-CoV-2","GGTGGGATGGCGGCAA",3,68.93,8.14,-2.69,0.11,2.47,1.03,0,">1 nonsynonymous","S43K R73F",2
"lib2","SARS-CoV-2","GGTGGGATGGTAGATA",9,133.83,10.81,-0.02,0.04,2.88,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTGGGCAAGTCTTAC",5,42.19,7.76,-3.08,0.31,1.5,1.13,0.04,">1 nonsynonymous","F17R P169I",2
"lib2","SARS-CoV-2","GGTGGGCACATTAAAT",7,83.07,9.9,-0.94,0.09,2.4,1.05,0,">1 nonsynonymous","L60S D97K E141T P149F",4
"lib2","SARS-CoV-2","GGTGGGCATTACAGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","N4Y C49* V173C",3
"lib2","SARS-CoV-2","GGTGGGGATGGGGAAC",4,23.26,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N4L C61V P82H N120P",4
"lib2","SARS-CoV-2","GGTGGGGTAGGCGAAA",5,130.06,10.22,-0.62,0.03,2.84,1.08,0,">1 nonsynonymous","R27E T55N E135G V173F",4
"lib2","SARS-CoV-2","GGTGGTACATGAGTAG",4,8.82,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","A33M C49E C61N G155H Y175S",5
"lib2","SARS-CoV-2","GGTGGTAGAAATCTTT",27,351.43,9.29,-1.54,0.04,1.94,1.07,0,">1 nonsynonymous","K56N G86N",2
"lib2","SARS-CoV-2","GGTGGTATAACCCACT",11,243.7,10.87,0.04,0.05,2.93,1.06,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","GGTGGTATCATTATGA",1,29.42,10.61,-0.22,0.05,2.92,1.1,0,">1 nonsynonymous","L5V F62P K132S",3
"lib2","SARS-CoV-2","GGTGGTATCTAATGTG",4,45.35,9.98,-0.86,0.08,2.33,1.07,0,">1 nonsynonymous","R16M P133K",2
"lib2","SARS-CoV-2","GGTGGTGGCATCTTTA",8,4.3,NA,NA,NA,NA,NA,NA,"stop","K128N Y175*",2
"lib2","SARS-CoV-2","GGTGGTTCTCTTCAGC",1,11.67,10.76,-0.08,0.06,3,1.02,0,"1 nonsynonymous","R27C",1
"lib2","SARS-CoV-2","GGTGTAAATTGCGTAA",9,83.36,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L131H C158H",2
"lib2","SARS-CoV-2","GGTGTAACAATGTATC",4,7.38,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","Y35A V103F",2
"lib2","SARS-CoV-2","GGTGTAAGAAGCATCC",9,15.77,NA,NA,NA,NA,NA,NA,"stop","L60E E76T K94Q N107R P133* S200L",6
"lib2","SARS-CoV-2","GGTGTAATAAAGCAGG",6,55.26,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6F S53M Y91P L188S",4
"lib2","SARS-CoV-2","GGTGTATACTAAAAGT",2,46.07,10.92,0.09,0.12,2.86,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGTGTATATAGATCGA",12,123.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86N D97S E154V Y175A",4
"lib2","SARS-CoV-2","GGTGTATTCCATAACC",3,49.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I Q84L K128I N151E T170D",5
"lib2","SARS-CoV-2","GGTGTCATCTCTAATT",6,67.82,10.67,-0.17,0.05,2.91,1.1,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","GGTGTCATTCCCCAAC",3,63.82,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14G P96Y",2
"lib2","SARS-CoV-2","GGTGTCCCAAAAGCGA",1,56.13,8.79,-2.05,0.13,1.77,1.13,0.01,">1 nonsynonymous","T46I L60C Q84K R127A",4
"lib2","SARS-CoV-2","GGTGTCCCAATAAATT",2,52.39,10.03,-0.81,0.07,2.6,1.08,0,">1 nonsynonymous","E135V V173N",2
"lib2","SARS-CoV-2","GGTGTCCGTGGCAACA",4,33.03,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G86V G196W",2
"lib2","SARS-CoV-2","GGTGTCTGCCCTCACA",2,10.31,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V52K Q84R D98I",3
"lib2","SARS-CoV-2","GGTGTCTTCTTACACC",6,135.7,9.58,-1.26,0.06,2.62,1.05,0,"1 nonsynonymous","R179K",1
"lib2","SARS-CoV-2","GGTGTGATTAACACAT",4,91.51,10.72,-0.11,0.04,2.91,1.09,0,"1 nonsynonymous","Y121H",1
"lib2","SARS-CoV-2","GGTGTGCCCATCAGCA",2,11.77,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T55F C158P G166E",3
"lib2","SARS-CoV-2","GGTGTGGTTGCTAAAA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","F44H D98*",2
"lib2","SARS-CoV-2","GGTGTGTGTAAAATAA",13,72.32,6.68,-4.15,0.49,1.5,1.19,0.03,"1 nonsynonymous","V71G",1
"lib2","SARS-CoV-2","GGTGTTAAGGGTCTTT",2,0.87,NA,NA,NA,NA,NA,NA,"stop","C49* V65H R127* G174F",4
"lib2","SARS-CoV-2","GGTGTTACAAGAGCCT",1,28.03,7.81,-3.03,0.18,2.61,1.12,0.01,">1 nonsynonymous","S41G C61M F156L G166K",4
"lib2","SARS-CoV-2","GGTGTTACAGTGGAAC",7,147.35,8.6,-2.23,0.05,2.91,1.03,0,">1 nonsynonymous","S43P S129T I142D",3
"lib2","SARS-CoV-2","GGTGTTCAACACGTAG",4,61.11,9.5,-1.34,0.06,2.89,1.04,0,">1 nonsynonymous","S129D G174V",2
"lib2","SARS-CoV-2","GGTGTTGACCTAAGAC",6,43.86,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T3Q N40T N58L G86C T170N",5
"lib2","SARS-CoV-2","GGTGTTGGCCACTTAT",12,93.69,7.43,-3.41,0.09,1.54,1.1,0,">1 nonsynonymous","G86A K114Q E154N",3
"lib2","SARS-CoV-2","GGTGTTGTACCCAAAG",10,172.23,10.82,-0.02,0.02,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTGTTGTATTAGAAC",3,35.06,10.8,-0.04,0.04,2.98,1.04,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","GGTTAAAAAATGTTGA",3,76.73,10.09,-0.74,0.04,2.96,1.07,0,">1 nonsynonymous","K56A G83R G174E",3
"lib2","SARS-CoV-2","GGTTAAAACAAGGGTA",1,6.19,9.81,-1.02,0.36,2.3,1,0.03,">1 nonsynonymous","G9R N40V N107P",3
"lib2","SARS-CoV-2","GGTTAAAAGTTTTTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139L P169Q Y175K",3
"lib2","SARS-CoV-2","GGTTAAACCCCAAAAT",3,27.07,6.26,-4.58,0.77,1.9,1.16,0.02,">1 nonsynonymous","R25M K56L T63H P82Y Y159G",5
"lib2","SARS-CoV-2","GGTTAAACGAAATTGA",1,37.2,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V37R P82K W106S T201S",4
"lib2","SARS-CoV-2","GGTTAAACGAGATGTC",2,96.55,8.34,-2.49,0.22,1.5,1.13,0.02,">1 nonsynonymous","N64D T100R I142S N151A S184L",5
"lib2","SARS-CoV-2","GGTTAAAGAAGAACTA",5,101.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90T Y175V",2
"lib2","SARS-CoV-2","GGTTAAATAAAGTATG",4,65.37,9.51,-1.32,0.09,2.69,1.07,0,">1 nonsynonymous","G9E T85Y I142A H189P",4
"lib2","SARS-CoV-2","GGTTAAATGCTTAACA",1,1.31,NA,NA,NA,NA,NA,NA,"stop","Y39* G51C D97S T100D Q144K G174W",6
"lib2","SARS-CoV-2","GGTTAACACACTCCAG",7,85.16,9.46,-1.38,0.08,1.76,1.07,0,">1 nonsynonymous","F44S N120M R136H",3
"lib2","SARS-CoV-2","GGTTAACCAGTAGCAA",2,53.96,10.38,-0.46,0.04,3,1,0,">1 nonsynonymous","E10M D59Q L187I",3
"lib2","SARS-CoV-2","GGTTAACCGAACTTCC",4,33.75,8.13,-2.71,0.38,1.5,1,0.06,">1 nonsynonymous","G83V F185C",2
"lib2","SARS-CoV-2","GGTTAACGGCTTTTAA",2,47.74,10.03,-0.81,0.09,2.48,1,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","GGTTAACTAATCCTTT",2,66.78,9.25,-1.59,0.05,2.98,1.08,0,">1 nonsynonymous","Y119Q I138R",2
"lib2","SARS-CoV-2","GGTTAAGACCCCAGCG",1,5.59,10.71,-0.12,0.1,2.88,1.08,0.01,">1 nonsynonymous","S36R K87R",2
"lib2","SARS-CoV-2","GGTTAAGACTCAAGTA",10,143.45,9.58,-1.25,0.03,2.9,1.09,0,">1 nonsynonymous","F47C L125Q",2
"lib2","SARS-CoV-2","GGTTAAGGCTCGATAT",14,37.6,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","F12I W23Q L57R I104Q P133Q",5
"lib2","SARS-CoV-2","GGTTAAGGTACTGGGT",1,19.37,8.69,-2.15,0.17,1.62,1.14,0.01,">1 nonsynonymous","A14W C31R N40Q",3
"lib2","SARS-CoV-2","GGTTAATAAAATCGTT",5,34.77,8.61,-2.23,0.14,1.92,1.09,0.01,">1 nonsynonymous","K48C N118I",2
"lib2","SARS-CoV-2","GGTTAATATGAAACGC",3,91.52,10.55,-0.28,0.03,2.95,1.04,0,">1 nonsynonymous","A33L T100N K128N",3
"lib2","SARS-CoV-2","GGTTAATCAACACAAG",1,67.12,10.06,-0.78,0.08,2.54,1.06,0,">1 nonsynonymous","A33R N120S",2
"lib2","SARS-CoV-2","GGTTAATGCTTGATTT",1,20.7,10.75,-0.08,0.05,2.99,1.01,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","GGTTAATGGCAATTCA",13,33.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C102N S164D P177W",3
"lib2","SARS-CoV-2","GGTTAATTACCACCTT",3,9.09,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","R16G V32R K48L P149L P161S L187D",6
"lib2","SARS-CoV-2","GGTTACAACGCACAAC",1,77.99,8.35,-2.48,0.12,2.94,1.06,0,">1 nonsynonymous","K56L Y119W F156T",3
"lib2","SARS-CoV-2","GGTTACAACTCAAAAT",6,123.21,9.85,-0.98,0.04,2.29,1.04,0,">1 nonsynonymous","V11Y S45M",2
"lib2","SARS-CoV-2","GGTTACAAGCTTAGGT",7,19.68,6,-4.84,1.14,1.5,1.1,0.02,">1 nonsynonymous","I80L W106L I142Y",3
"lib2","SARS-CoV-2","GGTTACACATAGCACT",3,157.13,10.77,-0.06,0.02,2.94,1.04,0,">1 nonsynonymous","S43E T85Y",2
"lib2","SARS-CoV-2","GGTTACACGAATCCAG",6,98.04,10.59,-0.24,0.03,2.98,1.02,0,">1 nonsynonymous","V11L T55R",2
"lib2","SARS-CoV-2","GGTTACACGTGAGGGT",6,50.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18S Y66G V180M",3
"lib2","SARS-CoV-2","GGTTACAGAATAAGAA",3,5.93,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","N13Y T55Y C61N N92A Y123L",5
"lib2","SARS-CoV-2","GGTTACAGCAAACAAA",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W A14D D34L S41N F62G A89C S129D R179K",8
"lib2","SARS-CoV-2","GGTTACATAAGCCAAC",4,28.94,9.33,-1.51,0.14,2.17,1.08,0.01,">1 nonsynonymous","C6R K56R P149L",3
"lib2","SARS-CoV-2","GGTTACATACATATTT",7,33.66,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","A33P V71R N157G",3
"lib2","SARS-CoV-2","GGTTACCACAAGAAAA",5,34.34,8.52,-2.32,0.14,1.57,1.12,0.01,">1 nonsynonymous","F44I G86S",2
"lib2","SARS-CoV-2","GGTTACCCATTAATCT",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23Q F44N P96A W106G R124W E141A P169Y",7
"lib2","SARS-CoV-2","GGTTACCGCCTGTATA",4,63.94,10.84,0.01,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTACGAACACAAAA",2,129.2,10.6,-0.23,0.05,2.92,1.05,0,">1 nonsynonymous","V37E F47L",2
"lib2","SARS-CoV-2","GGTTACGCAAAAGACT",2,2.11,NA,NA,NA,NA,NA,NA,"stop","A22* S113P",2
"lib2","SARS-CoV-2","GGTTACGTTGACTACC",7,45.98,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N92I D97H Y121Q",3
"lib2","SARS-CoV-2","GGTTACTAAAGAACTA",3,6.74,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","C6L V37A I142M V182L",4
"lib2","SARS-CoV-2","GGTTAGAACAAAGCAA",2,1.7,NA,NA,NA,NA,NA,NA,"stop","L60R I142*",2
"lib2","SARS-CoV-2","GGTTAGAAGAGCTATT",3,47.3,7.21,-3.62,0.09,2.19,1.06,0,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","GGTTAGAGACTGGTGG",2,38.08,10.95,0.12,0.07,2.99,1.02,0,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","GGTTAGAGGCCTTGAC",1,2.22,NA,NA,NA,NA,NA,NA,"stop","R27* Y91C",2
"lib2","SARS-CoV-2","GGTTAGCAACTGAGAT",1,3.21,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GGTTAGCCGCATTAAA",1,25.78,10.89,0.05,0.06,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTAGCGCTCTGAGT",1,11.48,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F70K V71E",2
"lib2","SARS-CoV-2","GGTTAGCTGTACCAAT",2,23.71,6.25,-4.58,0.97,1.5,1.2,0.03,">1 nonsynonymous","A105D V173A",2
"lib2","SARS-CoV-2","GGTTAGCTGTCAGAAT",2,92.38,10.02,-0.82,0.07,2.66,1.01,0,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","GGTTAGGAGAAAAACT",5,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Q A81V K87R K199R",4
"lib2","SARS-CoV-2","GGTTAGGAGACGTTAG",6,2.26,NA,NA,NA,NA,NA,NA,"stop","R16* Y35S I88Y W106G P149S",5
"lib2","SARS-CoV-2","GGTTAGGATACGCACC",3,57.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S53F P133D Q176R",3
"lib2","SARS-CoV-2","GGTTAGGCGGGACACG",2,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M P96K I104G",3
"lib2","SARS-CoV-2","GGTTAGGTTCGAGCTT",10,153.53,10.75,-0.09,0.03,2.92,1.1,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","GGTTAGGTTCGTAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Q A89* N107F E141L",4
"lib2","SARS-CoV-2","GGTTAGTAATATTAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49S L60* L95S",3
"lib2","SARS-CoV-2","GGTTAGTCAATGTTAA",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97F Y175F",2
"lib2","SARS-CoV-2","GGTTAGTCTATAGAAC",1,39.15,9.59,-1.25,0.12,2.15,1.13,0.01,">1 nonsynonymous","G9L C61R D90T F160Q",4
"lib2","SARS-CoV-2","GGTTATAACCTGTCGG",8,64.49,6,-4.84,1.8,1.5,1.09,0,">1 nonsynonymous","V37Y R124M G152V S200F",4
"lib2","SARS-CoV-2","GGTTATAACTCCAAGC",2,40.7,9.07,-1.77,0.08,3,1.04,0,"1 nonsynonymous","G166K",1
"lib2","SARS-CoV-2","GGTTATAATTCGATCT",1,11.08,10.89,0.06,0.08,2.9,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTATAATTTTTGCC",7,79.77,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F8Y S41G K56W Y175S",4
"lib2","SARS-CoV-2","GGTTATACTCCACTTA",3,46.4,10.03,-0.81,0.09,2.57,1.08,0,">1 nonsynonymous","P7S R27K S53C E135S",4
"lib2","SARS-CoV-2","GGTTATAGATGTATGC",7,2.43,NA,NA,NA,NA,NA,NA,"stop","D112*",1
"lib2","SARS-CoV-2","GGTTATATATCACATG",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A P191C T201C",3
"lib2","SARS-CoV-2","GGTTATCCAACCGGAA",4,277.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I80P T85G T100Y A105V T170F Y178I",6
"lib2","SARS-CoV-2","GGTTATCCCAGAATAA",16,342.94,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S29V D68P Y178G",3
"lib2","SARS-CoV-2","GGTTATCGCTCCGACC",9,195.76,9.42,-1.42,0.05,2.72,1.05,0,">1 nonsynonymous","F44L D59G G174T",3
"lib2","SARS-CoV-2","GGTTATCGTAGCTTAA",6,114.77,10.89,0.05,0.03,2.95,1.05,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","GGTTATCTGCTCATGT",1,56.19,10.26,-0.58,0.03,2.91,1.06,0,">1 nonsynonymous","S41Y K87N S139T",3
"lib2","SARS-CoV-2","GGTTATGACAGGCCGA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","K56P D98*",2
"lib2","SARS-CoV-2","GGTTATGACATCTAAT",6,87.61,10.46,-0.37,0.05,2.89,1.09,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","GGTTATGACCAGTAAG",18,343.67,10.79,-0.04,0.05,2.93,1.08,0,">1 nonsynonymous","S147Y T201K",2
"lib2","SARS-CoV-2","GGTTATGATTTAAAAT",3,18.71,10.86,0.02,0.05,3,1.03,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","GGTTATGTAATTTTAT",4,7.18,8.71,-2.13,0.41,2.05,1.13,0.07,">1 nonsynonymous","L5D E76V E135M",3
"lib2","SARS-CoV-2","GGTTATTAGTAGAAAT",10,156.08,10.72,-0.11,0.04,2.95,1.05,0,"1 nonsynonymous","Y39H",1
"lib2","SARS-CoV-2","GGTTATTCAACACGAA",2,9.18,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y143T S164I S184V",3
"lib2","SARS-CoV-2","GGTTATTTCTTTTTCT",8,60.55,10.8,-0.03,0.06,2.96,1.05,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","GGTTCAACATACATCC",2,35.14,6,-4.84,0.62,2.95,1.12,0,">1 nonsynonymous","S19E Y35S S129C",3
"lib2","SARS-CoV-2","GGTTCACGTGCCGTAG",2,5.41,10.29,-0.54,0.07,3,1.08,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","GGTTCACTCTAGCCTA",8,103.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L95K L125V F160D",3
"lib2","SARS-CoV-2","GGTTCACTGTCCAAAT",4,118.36,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P7L N120L G172V K199I",4
"lib2","SARS-CoV-2","GGTTCAGTATCGTACC",16,89.42,6,-4.84,1.45,1.5,1.14,0,">1 nonsynonymous","F8C V77P L122Y Y143S P149I F156T",6
"lib2","SARS-CoV-2","GGTTCATACGTATCAC",4,65.1,10.65,-0.18,0.04,2.96,1.05,0,"1 nonsynonymous","D59M",1
"lib2","SARS-CoV-2","GGTTCATTGGGCTCAG",3,14.74,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","F167T T201W",2
"lib2","SARS-CoV-2","GGTTCCAAACTTGTCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51R N92G I138S P149N S200Y",5
"lib2","SARS-CoV-2","GGTTCCAAGGATAAAA",2,5.91,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","C6V F47P F99P L125R T140E P169Y",6
"lib2","SARS-CoV-2","GGTTCCACTCAAAGCG",7,86.66,9.29,-1.55,0.28,1.5,1,0.04,">1 nonsynonymous","L5P V77Y D98T",3
"lib2","SARS-CoV-2","GGTTCCATGACAACGT",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P T85M N92Y",3
"lib2","SARS-CoV-2","GGTTCCCCGAGTTGAA",4,43.19,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R124I C158Q",2
"lib2","SARS-CoV-2","GGTTCCCTAGCTAACA",2,3.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","GGTTCCGAAGTCCTTG",4,57.66,10.68,-0.15,0.06,2.89,1.12,0,"1 nonsynonymous","G9K",1
"lib2","SARS-CoV-2","GGTTCCGATAGTTTTT",1,55.11,9.16,-1.68,0.06,2.88,1.08,0,">1 nonsynonymous","G9I F126V N171Q",3
"lib2","SARS-CoV-2","GGTTCCGATGTTAGCT",9,114.34,10.32,-0.51,0.04,2.83,1.02,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","GGTTCCGATTGCCGTA",7,70.23,10.35,-0.48,0.05,2.87,1.02,0,"1 nonsynonymous","L57A",1
"lib2","SARS-CoV-2","GGTTCCTACTGCAACG",2,33.42,10.62,-0.22,0.05,2.93,1.04,0,">1 nonsynonymous","F44Y A67I V173L",3
"lib2","SARS-CoV-2","GGTTCGAAAGTTAAAA",6,43.39,10.81,-0.02,0.03,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTCGACGAGCTGAG",38,160.81,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F62L P96L E135T",3
"lib2","SARS-CoV-2","GGTTCGACTATGGCTA",17,129.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40I E76I",2
"lib2","SARS-CoV-2","GGTTCGGATGATGGAT",17,178.27,6.11,-4.73,0.93,1.5,1.22,0.02,">1 nonsynonymous","V37M Y93I D97T L125F",4
"lib2","SARS-CoV-2","GGTTCGGATTTATCCC",7,1.98,NA,NA,NA,NA,NA,NA,"stop","N4* P96D Y119F T170D",4
"lib2","SARS-CoV-2","GGTTCGGCACTGCCTA",1,7.01,10.84,0.01,0.17,2.81,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GGTTCGGCGTACATCA",6,80.32,8.97,-1.87,0.12,1.69,1.07,0.01,">1 nonsynonymous","K26V C61I Y66N V71M",4
"lib2","SARS-CoV-2","GGTTCGGGTCACACAT",8,21.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41Y V71T A89L Q176L S200H",5
"lib2","SARS-CoV-2","GGTTCGGTATTAGCTT",8,225.45,10.79,-0.04,0.04,2.98,1.04,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","GGTTCGGTCACCAGTT",5,36.66,7.24,-3.6,0.29,1.5,1.04,0.02,">1 nonsynonymous","F12G T63K P149L G152T",4
"lib2","SARS-CoV-2","GGTTCGTTGCAGGTGT",3,45.09,8.24,-2.59,0.15,1.95,1.08,0.01,">1 nonsynonymous","C61G D90S A145T V153M Q168T",5
"lib2","SARS-CoV-2","GGTTCGTTTTAAAAAG",9,66.33,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F12M R25L F47L Y93Q A105D",5
"lib2","SARS-CoV-2","GGTTCTAAATTTCATT",3,12.32,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F12M W106T S184P",3
"lib2","SARS-CoV-2","GGTTCTAACAAAATAT",6,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","GGTTCTAAGGCCCATG",6,3.59,NA,NA,NA,NA,NA,NA,"stop","F12R D97V Q176*",3
"lib2","SARS-CoV-2","GGTTCTATAGTCCCTG",2,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F P96T P149S P161S",4
"lib2","SARS-CoV-2","GGTTCTATTTCATAAA",7,124.95,10.79,-0.05,0.06,2.92,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GGTTCTCCCTTATAAC",4,140.83,10.56,-0.28,0.04,2.89,1.11,0,">1 nonsynonymous","L60R K114T",2
"lib2","SARS-CoV-2","GGTTCTCGCTCAATGG",2,6.48,6.74,-4.1,0.41,1.5,1.01,0.02,">1 nonsynonymous","D112S Q144E T170Y P177L L183I",5
"lib2","SARS-CoV-2","GGTTCTGACTAAATGA",3,46.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V20G G86C D97G",3
"lib2","SARS-CoV-2","GGTTCTGATATAGCAA",11,189.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C31S I88A",2
"lib2","SARS-CoV-2","GGTTCTGGAATTCGAG",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R P96E E141A P149Y V153C",5
"lib2","SARS-CoV-2","GGTTCTGGGAGCAATG",6,36.57,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","N1D W23I S108P P133R",4
"lib2","SARS-CoV-2","GGTTCTTGTAGCACAC",3,43.1,10.8,-0.03,0.02,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTCTTTAACCTGAA",4,9.51,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","F12H V52H V65E V103P N151D",5
"lib2","SARS-CoV-2","GGTTCTTTAAGCATGA",11,111.29,10.66,-0.18,0.05,2.92,1.09,0,">1 nonsynonymous","A33L I138T",2
"lib2","SARS-CoV-2","GGTTGAAAAAATCGCT",4,29,10.8,-0.03,0.06,2.94,1.05,0,">1 nonsynonymous","E10S A42D",2
"lib2","SARS-CoV-2","GGTTGAAACGCAAAAT",6,34.91,6,-4.84,2,3,1.26,0,">1 nonsynonymous","F44S A89Y G146N P149T T201R",5
"lib2","SARS-CoV-2","GGTTGAAATTTACTGG",3,55.14,10.15,-0.69,0.06,2.67,1,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","GGTTGACAATTCGCAA",7,100.92,10.82,-0.01,0.04,2.93,1.06,0,">1 nonsynonymous","L60Y S184A",2
"lib2","SARS-CoV-2","GGTTGACACAAAACTA",1,9.69,7.11,-3.73,0.54,1.74,1.08,0.06,">1 nonsynonymous","Q144R C150T",2
"lib2","SARS-CoV-2","GGTTGACATTAATCGT",6,101.69,8.94,-1.9,0.08,1.72,1.14,0,">1 nonsynonymous","Y39L D98W A105V A145S",4
"lib2","SARS-CoV-2","GGTTGACATTTAAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36M S45L Y165* V181S",4
"lib2","SARS-CoV-2","GGTTGACGGATAGAAC",6,23.23,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","K48S V103N F134P N171H",4
"lib2","SARS-CoV-2","GGTTGACTTAAATTGC",7,88.8,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F8L T15L Y165E",3
"lib2","SARS-CoV-2","GGTTGAGAATATCTAA",6,88.44,9.72,-1.12,0.06,1.91,1.04,0,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","GGTTGAGCCGACTCCG",11,41.73,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","T3P E10A S36G F99N",4
"lib2","SARS-CoV-2","GGTTGAGCGGTAAATA",1,21.34,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","E10D G83Y I142S N151L N157R V173D",6
"lib2","SARS-CoV-2","GGTTGATGACCCAGTT",1,65.11,10.75,-0.09,0.04,2.93,1.06,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","GGTTGATTACCACTAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145G",1
"lib2","SARS-CoV-2","GGTTGCAAACTAGGCG",4,48.42,10.72,-0.12,0.03,2.98,1.04,0,">1 nonsynonymous","V115M S200V",2
"lib2","SARS-CoV-2","GGTTGCAAGCACAAAA",5,90.2,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N4A D68M G101T K128L S164A",5
"lib2","SARS-CoV-2","GGTTGCAGATCCAAAC",4,84.36,9.15,-1.69,0.09,1.73,1.08,0,">1 nonsynonymous","S53Y A89N",2
"lib2","SARS-CoV-2","GGTTGCATAAAAACAC",3,28.39,6.54,-4.3,0.57,1.79,1.21,0.04,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","GGTTGCCACCTTACGT",2,1.86,NA,NA,NA,NA,NA,NA,"stop","F12R T63*",2
"lib2","SARS-CoV-2","GGTTGCCAGGAACGGC",7,68.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1T Y91S N107Y N157V",4
"lib2","SARS-CoV-2","GGTTGCCGAATCCTTA",4,33.37,9.55,-1.29,0.06,3,1.01,0,">1 nonsynonymous","P149I T170G",2
"lib2","SARS-CoV-2","GGTTGCGAAATACTGC",11,60.48,6,-4.84,1.03,1.5,1.12,0.02,">1 nonsynonymous","L95T I138F G155T",3
"lib2","SARS-CoV-2","GGTTGCGCCCATCAAT",3,57.11,10.17,-0.67,0.09,2.52,1.03,0,">1 nonsynonymous","K56H Y66H D97S N130L",4
"lib2","SARS-CoV-2","GGTTGCGCGGAATATC",5,4.37,NA,NA,NA,NA,NA,NA,"stop","N4R R136L R179*",3
"lib2","SARS-CoV-2","GGTTGCTCTACGAAAT",7,68.44,10.89,0.05,0.06,2.93,1.09,0,"1 nonsynonymous","P149E",1
"lib2","SARS-CoV-2","GGTTGGAAAGGATGTT",4,17.03,8.98,-1.86,0.24,1.51,1.13,0.02,">1 nonsynonymous","S19Q Y123A",2
"lib2","SARS-CoV-2","GGTTGGATACCCACCT",3,169.38,10.36,-0.47,0.04,2.93,1.05,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","GGTTGGCAAACAAGCA",1,5.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49N T63S",2
"lib2","SARS-CoV-2","GGTTGGTTCACACGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36R S147* V173E K198I",4
"lib2","SARS-CoV-2","GGTTGTCCTAACTGGT",2,50.06,10.97,0.14,0.06,2.94,1.04,0,"1 nonsynonymous","V173Q",1
"lib2","SARS-CoV-2","GGTTGTCCTGACTATT",18,118.41,6,-4.84,1.88,1.5,1.17,0.01,">1 nonsynonymous","C6Y R25A K87A V103W C158S",5
"lib2","SARS-CoV-2","GGTTGTCGCCAAACCA",6,0.88,NA,NA,NA,NA,NA,NA,"stop","C61F G86* Y93H C150R T170N",5
"lib2","SARS-CoV-2","GGTTGTCTAAAGAATC",1,7.53,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K48L Y91N D137C",3
"lib2","SARS-CoV-2","GGTTGTGTTTATCGTA",11,286.87,10.29,-0.54,0.03,2.87,1.08,0,">1 nonsynonymous","P7G E141L T201H",3
"lib2","SARS-CoV-2","GGTTGTTCCATGCTGG",13,196.54,9.78,-1.05,0.07,2.12,1.04,0,">1 nonsynonymous","E10C N40F",2
"lib2","SARS-CoV-2","GGTTTAAATGTTCGGG",5,93.21,9.87,-0.97,0.04,2.67,1.14,0,">1 nonsynonymous","G83S Y91M",2
"lib2","SARS-CoV-2","GGTTTAACTCGCAGCA",11,64.36,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S41T T46L F62L Y119L R127N Y165Q",6
"lib2","SARS-CoV-2","GGTTTAAGAAGCGATA",4,13.7,9.23,-1.6,0.09,2.96,1,0,">1 nonsynonymous","T140H N157H S164H",3
"lib2","SARS-CoV-2","GGTTTAAGGCTGTCGA",17,274.46,10.84,0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTTAATATAATAAT",1,21.56,9.84,-1,0.1,2.47,1.08,0.01,">1 nonsynonymous","N40V L60S",2
"lib2","SARS-CoV-2","GGTTTACATGCAAGAT",7,75.56,6,-4.84,2,1.87,1.26,0.01,">1 nonsynonymous","C6T F47L D68R",3
"lib2","SARS-CoV-2","GGTTTACCAAGGATTG",3,27.13,10.95,0.11,0.08,2.89,1.12,0,">1 nonsynonymous","P7E L125G Q163W",3
"lib2","SARS-CoV-2","GGTTTACGGTCTATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F47I D97* D137Y P161L P169M",5
"lib2","SARS-CoV-2","GGTTTAGAAAACCCTA",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87V N151K F156I L183H",4
"lib2","SARS-CoV-2","GGTTTAGTGCCGAAAC",2,56.62,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","K87Q D112T F134E P149L F160D",5
"lib2","SARS-CoV-2","GGTTTATAACGAGTGC",1,9.42,10.7,-0.14,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GGTTTATAGGTGATGG",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F I80R V115S G152S",4
"lib2","SARS-CoV-2","GGTTTATATTCAAAAA",5,66.48,10.72,-0.12,0.03,2.97,1.06,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","GGTTTATCATTGCACA",13,1.7,NA,NA,NA,NA,NA,NA,"stop","V37M N64M T85N S113H L122* P177V",6
"lib2","SARS-CoV-2","GGTTTATCTAGTACCG",1,94.56,8.8,-2.04,0.07,2.83,1.12,0,">1 nonsynonymous","N120P G174W",2
"lib2","SARS-CoV-2","GGTTTATGATAGTAAC",13,8.81,NA,NA,NA,NA,NA,NA,"stop","E10* C49P V71L S200T",4
"lib2","SARS-CoV-2","GGTTTATGTCTGAACA",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41E L95R E141S G172L",4
"lib2","SARS-CoV-2","GGTTTATTATGAAATA",3,85.27,10.51,-0.33,0.04,2.92,1.04,0,">1 nonsynonymous","N4S D98L T201R",3
"lib2","SARS-CoV-2","GGTTTCAAATATCTCG",12,79.38,6,-4.84,2,3,1.26,0,">1 nonsynonymous","A67C R78G K94N W106P P133A",5
"lib2","SARS-CoV-2","GGTTTCACATGCCAAC",1,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R T15L G83N N107A S129V",5
"lib2","SARS-CoV-2","GGTTTCAGATATCAAA",4,18.22,7.76,-3.07,0.29,1.5,1.08,0.04,">1 nonsynonymous","K87W V103T I142Y T201K",4
"lib2","SARS-CoV-2","GGTTTCATCCGTTTTA",4,125.05,10.08,-0.75,0.05,2.63,1.07,0,">1 nonsynonymous","L5E S43R L95T K199P",4
"lib2","SARS-CoV-2","GGTTTCCCCATTCCCC",3,35.86,9.88,-0.95,0.11,2.22,1.07,0.01,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","GGTTTCCGAAACGAGT",2,82.41,10.64,-0.19,0.09,2.72,1.18,0,"1 nonsynonymous","Q144D",1
"lib2","SARS-CoV-2","GGTTTCGACAGATAAA",1,6.11,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","G51C N64L G116R S147V N151Q V181R",6
"lib2","SARS-CoV-2","GGTTTCGACCTGAAAA",9,28.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","E10Y V77K G83R Q168T G174M",5
"lib2","SARS-CoV-2","GGTTTCTACAAAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","S41T D59V I88V L122* G146V T201S",6
"lib2","SARS-CoV-2","GGTTTGAAGCAACAAT",3,36.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36Y A81N T100K G117Q F156V",5
"lib2","SARS-CoV-2","GGTTTGACAAAAAAAA",3,49.77,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V37C R73L T140H Y159D G166F G172N",6
"lib2","SARS-CoV-2","GGTTTGACTTGAGATA",6,165.34,10.74,-0.09,0.03,2.93,1.08,0,">1 nonsynonymous","N130S P149H",2
"lib2","SARS-CoV-2","GGTTTGAGGTAGTCAG",7,18.8,8.53,-2.3,0.18,2.04,1.2,0.01,">1 nonsynonymous","K26N I142N",2
"lib2","SARS-CoV-2","GGTTTGGAGAGACAGC",3,25.49,9.91,-0.92,0.32,1.5,1.06,0.05,">1 nonsynonymous","D68Y S184Y",2
"lib2","SARS-CoV-2","GGTTTGGATGTTTGTA",5,0.46,NA,NA,NA,NA,NA,NA,"stop","S45T Y50F K56*",3
"lib2","SARS-CoV-2","GGTTTGGTCATAGTAC",4,22.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86H R136F",2
"lib2","SARS-CoV-2","GGTTTGTAAGTGTATA",7,56.96,6.86,-3.98,0.37,1.5,1.18,0.02,">1 nonsynonymous","C6A D90W I138Y",3
"lib2","SARS-CoV-2","GGTTTGTTCCTGATCT",1,13.8,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N92P I142G Y178L",3
"lib2","SARS-CoV-2","GGTTTGTTGAAGGGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","C6D S19* Q168P",3
"lib2","SARS-CoV-2","GGTTTTACGATATCAT",3,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107Y S139N",2
"lib2","SARS-CoV-2","GGTTTTAGAAACGATT",1,1.25,NA,NA,NA,NA,NA,NA,"stop","Y35* L60E P82F N118H P161N",5
"lib2","SARS-CoV-2","GGTTTTATGGGACGAT",6,2.06,NA,NA,NA,NA,NA,NA,"stop","I72V R78* Y175M",3
"lib2","SARS-CoV-2","GGTTTTCAAGTCCCTG",18,64.8,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2V C61T G83D C158L",4
"lib2","SARS-CoV-2","GGTTTTCACTTGCAAT",13,77.05,6.14,-4.69,0.66,1.5,1.18,0.01,">1 nonsynonymous","R73W I88F G101W",3
"lib2","SARS-CoV-2","GGTTTTCAGTATTACG",6,61.76,10.89,0.06,0.06,2.85,1.1,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","GGTTTTCTAGGTAAAT",4,8.02,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C49F D97F L111Y Q176P",4
"lib2","SARS-CoV-2","GGTTTTTAATAAATCG",1,17.89,10.84,0.01,0.11,2.86,1.15,0,"1 nonsynonymous","P197S",1
"lib2","SARS-CoV-2","GGTTTTTCACCATCGG",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90I F99A W106V",3
"lib2","SARS-CoV-2","GGTTTTTCTCAACAAT",7,70.02,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F44C I142R G152I",3
"lib2","SARS-CoV-2","GTAAAAAAAAAAGAAA",12,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T S41K V103S L122G C158Y Q168L",6
"lib2","SARS-CoV-2","GTAAAAAAAACCTCTT",4,7.81,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C158L Y165H P191F",3
"lib2","SARS-CoV-2","GTAAAAAAAATGGATA",3,1.18,NA,NA,NA,NA,NA,NA,"stop","F44R T63M P161* Y165Q G174L",5
"lib2","SARS-CoV-2","GTAAAAAAACTCAAAC",4,52.5,10.06,-0.78,0.08,2.71,1,0,">1 nonsynonymous","E141H L183V L188P",3
"lib2","SARS-CoV-2","GTAAAAAAAGACTAAA",4,66.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6T V37P Y91E W106R N151D H189N T201N",7
"lib2","SARS-CoV-2","GTAAAAAAATAGCCCG",1,15.7,10,-0.84,0.23,1.92,1.02,0.02,">1 nonsynonymous","Y50N S184H",2
"lib2","SARS-CoV-2","GTAAAAAACTAATAAG",13,188.61,8.95,-1.88,0.04,2.06,1.1,0,">1 nonsynonymous","S41G G51D F156I",3
"lib2","SARS-CoV-2","GTAAAAAACTGAGACC",2,4.94,NA,NA,NA,NA,NA,NA,"stop","I138Y Q176* F185S",3
"lib2","SARS-CoV-2","GTAAAAAAGAATGACT",6,134.75,10.74,-0.1,0.04,2.95,1.07,0,"1 nonsynonymous","V153G",1
"lib2","SARS-CoV-2","GTAAAAAAGTAGCGCG",1,0.88,NA,NA,NA,NA,NA,NA,"stop","G9R Q84*",2
"lib2","SARS-CoV-2","GTAAAAAAGTTCAGTA",2,18.83,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","F62D Y91C Y121S P149G T201Y",5
"lib2","SARS-CoV-2","GTAAAAAATCAAACGT",5,29.36,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I28R N40L D98F I104L",4
"lib2","SARS-CoV-2","GTAAAAAATCTTAGAA",4,87.63,10.6,-0.23,0.04,2.92,1.07,0,">1 nonsynonymous","Y39F D90L",2
"lib2","SARS-CoV-2","GTAAAAAATGGGCCGA",2,6.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","GTAAAAAATTATTATT",11,95.87,9.69,-1.15,0.05,2.85,1.08,0,">1 nonsynonymous","P54N A145K V153K",3
"lib2","SARS-CoV-2","GTAAAAACAAAAAGAA",1,7.27,10.08,-0.75,0.13,2.81,1,0.01,">1 nonsynonymous","E10C D97L L125M N151I",4
"lib2","SARS-CoV-2","GTAAAAACAATATTAA",6,3.66,NA,NA,NA,NA,NA,NA,"stop","A14Y Q79* D90K R124A L188N",5
"lib2","SARS-CoV-2","GTAAAAACACAGGAGT",8,83.93,6,-4.84,2,1.5,1.3,0.03,"1 nonsynonymous","Y93G",1
"lib2","SARS-CoV-2","GTAAAAACAGAGGAGG",9,124.98,8.62,-2.21,0.07,2.98,1.07,0,"1 nonsynonymous","R73E",1
"lib2","SARS-CoV-2","GTAAAAACAGTGCCAA",1,7.42,6,-4.84,1.55,1.5,1.17,0.05,">1 nonsynonymous","G9L L57N F134L V173F",4
"lib2","SARS-CoV-2","GTAAAAACATGACACG",9,33.21,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T15P G101T",2
"lib2","SARS-CoV-2","GTAAAAACCTCTTAAT",6,23.37,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","F12Q N64Q I72R T140S",4
"lib2","SARS-CoV-2","GTAAAAACGCTTTCCT",2,14.83,9.87,-0.97,0.13,2.12,1,0.01,">1 nonsynonymous","K26V R127S A145S",3
"lib2","SARS-CoV-2","GTAAAAACGGCGTTCA",8,71.73,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A33H S36L F99I Y119M",4
"lib2","SARS-CoV-2","GTAAAAACGTTATAAC",9,118.94,10.74,-0.1,0.02,2.98,1.04,0,">1 nonsynonymous","P7A K198Q",2
"lib2","SARS-CoV-2","GTAAAAACTCATGCTA",3,51.53,10.79,-0.04,0.07,2.91,1.09,0,"1 nonsynonymous","A33M",1
"lib2","SARS-CoV-2","GTAAAAACTCTAGTTA",19,300.28,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S69K G172E S200V",3
"lib2","SARS-CoV-2","GTAAAAAGAATTTGTA",7,50.24,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","GTAAAAAGACAAATAA",7,175.04,10.85,0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAAAAGATCTATTA",7,65.51,10.34,-0.5,0.05,2.88,1.05,0,">1 nonsynonymous","L57M D97F",2
"lib2","SARS-CoV-2","GTAAAAAGCCACATCC",1,0,NA,NA,NA,NA,NA,NA,"stop","F17E V32* P149M G166Q",4
"lib2","SARS-CoV-2","GTAAAAAGGCCTAAGT",1,11.63,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","K56L A89L N107S I142R",4
"lib2","SARS-CoV-2","GTAAAAAGGTGAGATG",6,157.86,10.77,-0.07,0.03,2.93,1.08,0,">1 nonsynonymous","K128V K132L P197S",3
"lib2","SARS-CoV-2","GTAAAAATAATCTACG",2,80.81,8.88,-1.95,0.07,2.85,1.13,0,">1 nonsynonymous","N118M G174L",2
"lib2","SARS-CoV-2","GTAAAAATACAGTACC",5,86.8,10.85,0.02,0.06,2.92,1.08,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","GTAAAAATAGGTTCAT",3,91.15,9.81,-1.03,0.07,2.43,1.08,0,">1 nonsynonymous","C6S N13R",2
"lib2","SARS-CoV-2","GTAAAAATATTAGAGA",9,14.06,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V65I N107K C158Y V180D",4
"lib2","SARS-CoV-2","GTAAAAATGGACATAA",2,17.89,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R25I L38Q L122Y",3
"lib2","SARS-CoV-2","GTAAAAATTAAAAAAC",3,43.58,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9I R25F I80S N107S",4
"lib2","SARS-CoV-2","GTAAAAATTTAGAACG",7,28.19,6.14,-4.69,0.8,2.6,1.34,0.03,"1 nonsynonymous","G101Y",1
"lib2","SARS-CoV-2","GTAAAACAAAAATTTG",4,112.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2L F44M D59G Y175L",4
"lib2","SARS-CoV-2","GTAAAACAAGAAATGG",6,12.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62S G83F N107I S147T",4
"lib2","SARS-CoV-2","GTAAAACAATCAAGAA",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68I N151S",2
"lib2","SARS-CoV-2","GTAAAACAATCACTAT",1,19.85,6,-4.84,1.53,3,1.08,0,">1 nonsynonymous","E10R D68L",2
"lib2","SARS-CoV-2","GTAAAACACAGCCATT",10,43.97,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","W23M F62E R73L F134S E154W",5
"lib2","SARS-CoV-2","GTAAAACACGCTCGCC",1,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y A42M I80C",3
"lib2","SARS-CoV-2","GTAAAACACTAATCCA",1,6.79,11.12,0.29,0.24,2.95,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTAAAACATTAGCAAA",14,6.99,NA,NA,NA,NA,NA,NA,"stop","P7* Y119V",2
"lib2","SARS-CoV-2","GTAAAACATTTAACAC",5,115.85,10.94,0.11,0.06,2.96,1.05,0,">1 nonsynonymous","T3D E154R",2
"lib2","SARS-CoV-2","GTAAAACCAAAAAATT",27,435.21,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I28G V37M N107G L122M P133W N151M F167V",7
"lib2","SARS-CoV-2","GTAAAACCAAACTCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","S45L K56D F99* A105T",4
"lib2","SARS-CoV-2","GTAAAACCAATTACCA",5,38.83,8.26,-2.58,0.18,1.6,1.1,0.01,">1 nonsynonymous","K94V S113G S200L",3
"lib2","SARS-CoV-2","GTAAAACCGATATAGT",1,21.27,10.58,-0.25,0.14,2.59,1.05,0.01,">1 nonsynonymous","A18Q Q84L",2
"lib2","SARS-CoV-2","GTAAAACCGCAATAAA",6,93.19,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44I D68A Y119D G146S Q168L",5
"lib2","SARS-CoV-2","GTAAAACCGCCGTTAA",2,39.57,10.69,-0.15,0.08,2.85,1.14,0,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","GTAAAACCGTCTGGGT",5,0,NA,NA,NA,NA,NA,NA,"stop","L5I C49T Y123*",3
"lib2","SARS-CoV-2","GTAAAACCGTTAGTCA",10,113.64,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A22T C31W D59I I88K",4
"lib2","SARS-CoV-2","GTAAAACCTATACATT",8,3.89,NA,NA,NA,NA,NA,NA,"stop","Y121*",1
"lib2","SARS-CoV-2","GTAAAACCTATCAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* N13V",2
"lib2","SARS-CoV-2","GTAAAACCTGTACATA",5,1.48,NA,NA,NA,NA,NA,NA,"stop","K94P T100*",2
"lib2","SARS-CoV-2","GTAAAACCTTAAACTT",6,66.8,10.58,-0.26,0.06,2.85,1.08,0,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","GTAAAACCTTACGACT",8,59.23,10.6,-0.24,0.03,3,1.02,0,">1 nonsynonymous","I2V T55C",2
"lib2","SARS-CoV-2","GTAAAACGCTCGGCTT",1,9.32,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F12V S41W G83C F99S L131N G152E",6
"lib2","SARS-CoV-2","GTAAAACGTGAAAGCC",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V T55V C61P D90F Q144R",5
"lib2","SARS-CoV-2","GTAAAACGTTCCGTCA",16,6.38,NA,NA,NA,NA,NA,NA,"stop","G83*",1
"lib2","SARS-CoV-2","GTAAAACTAATATAAT",1,93.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4L T85M D98Y A105C N120R",5
"lib2","SARS-CoV-2","GTAAAACTACCTCTAC",4,26.3,8.62,-2.22,0.14,2.26,1.08,0.01,">1 nonsynonymous","N107L S200L",2
"lib2","SARS-CoV-2","GTAAAACTACTTTTGA",7,140.29,10.8,-0.04,0.03,2.87,1.14,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","GTAAAACTAGAGCCAT",2,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21G S41G C49Y I104H Q144S",5
"lib2","SARS-CoV-2","GTAAAACTCAAAGAAA",21,282.85,10.65,-0.18,0.04,2.89,1.1,0,">1 nonsynonymous","T63K R78H",2
"lib2","SARS-CoV-2","GTAAAACTCTCTTCAG",4,14.81,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S36R D112L K128Y",3
"lib2","SARS-CoV-2","GTAAAACTTCCGATTA",1,23.07,10.2,-0.63,0.16,2.51,1.07,0.01,">1 nonsynonymous","D90L S164L Y178H",3
"lib2","SARS-CoV-2","GTAAAAGAAAACGTCA",4,86.5,10.85,0.01,0.05,2.98,1.03,0,"1 nonsynonymous","T55D",1
"lib2","SARS-CoV-2","GTAAAAGAAATAGGCA",7,23.23,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","Q84R F99S G146A P149H",4
"lib2","SARS-CoV-2","GTAAAAGACGGGGAGT",4,41.54,10.71,-0.12,0.06,2.84,1.16,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","GTAAAAGATAAAGCAG",15,87.17,7.11,-3.73,0.27,1.5,1.13,0.02,">1 nonsynonymous","F47C L60M A105N P169L",4
"lib2","SARS-CoV-2","GTAAAAGCACAGGTTC",6,36.96,10.18,-0.66,0.09,2.63,1.03,0,">1 nonsynonymous","L5G V37F P82T",3
"lib2","SARS-CoV-2","GTAAAAGCATATCAGC",6,119.65,9.44,-1.4,0.09,1.92,1.07,0,"1 nonsynonymous","R136D",1
"lib2","SARS-CoV-2","GTAAAAGCCAAAATAG",5,66.47,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","D68V G86L N120E E154G",4
"lib2","SARS-CoV-2","GTAAAAGGAACACCTA",6,32.06,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T3H G9V V37S S41A K48R S113E",6
"lib2","SARS-CoV-2","GTAAAAGGATAAAAAC",4,42.97,9.14,-1.7,0.13,1.79,1.16,0.01,">1 nonsynonymous","F44G W106S G174S",3
"lib2","SARS-CoV-2","GTAAAAGGGTGCCATG",2,0.25,NA,NA,NA,NA,NA,NA,"stop","T55D S69* Y121*",3
"lib2","SARS-CoV-2","GTAAAAGGTTAACTCA",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S S53C D98V W106A K128G P133E E154S K198N",8
"lib2","SARS-CoV-2","GTAAAAGTCCAACGAA",6,52.91,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F47I S139G C150G",3
"lib2","SARS-CoV-2","GTAAAAGTCTTTAGTA",8,54.16,8.58,-2.25,0.09,2.99,1.12,0,">1 nonsynonymous","Y35L N64V Y143A S147E",4
"lib2","SARS-CoV-2","GTAAAATAAAAATTAT",18,119.78,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","S19L G86Y",2
"lib2","SARS-CoV-2","GTAAAATAAAAGAACA",2,22.84,10.64,-0.2,0.09,2.89,1.07,0,"1 nonsynonymous","A14I",1
"lib2","SARS-CoV-2","GTAAAATAACATAGCA",7,84.78,10.57,-0.27,0.1,2.73,1.04,0,">1 nonsynonymous","G116W T201P",2
"lib2","SARS-CoV-2","GTAAAATAACATGCAG",5,0.27,NA,NA,NA,NA,NA,NA,"stop","N13Q C31Q F47L C195*",4
"lib2","SARS-CoV-2","GTAAAATAAGAAACGT",3,20.89,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","L95G R127L P133F T201V",4
"lib2","SARS-CoV-2","GTAAAATACAAACACA",5,14.03,8.33,-2.5,0.17,1.65,1.14,0.01,">1 nonsynonymous","A14P N40E G152L",3
"lib2","SARS-CoV-2","GTAAAATACCTAATTC",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R C61W F99I T140I G146S F160A",6
"lib2","SARS-CoV-2","GTAAAATAGAATGAAG",3,52.73,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3H V37S A89M P177C",4
"lib2","SARS-CoV-2","GTAAAATATGATCACT",1,15.29,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","R16S T100L I142P G146P",4
"lib2","SARS-CoV-2","GTAAAATCAAAATATT",1,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S G116A V181I",3
"lib2","SARS-CoV-2","GTAAAATCACCGCACA",11,10.23,NA,NA,NA,NA,NA,NA,"stop","T3W D34V Y119H S129* P161L Y175S L187S",7
"lib2","SARS-CoV-2","GTAAAATCCGGCAGCA",4,201.08,8.39,-2.44,0.09,2.35,1.09,0,">1 nonsynonymous","Y119H V173I",2
"lib2","SARS-CoV-2","GTAAAATCTATGAGGC",6,151.73,10.39,-0.44,0.04,2.97,1.03,0,">1 nonsynonymous","G51H F156W",2
"lib2","SARS-CoV-2","GTAAAATCTCTTCAGT",6,77.17,10.69,-0.15,0.03,2.84,1.15,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","GTAAAATGACCTCCGA",6,95.63,8.47,-2.37,0.1,2.98,1.01,0,">1 nonsynonymous","S43Y S129H N157L",3
"lib2","SARS-CoV-2","GTAAAATGACGCCCAG",9,42.27,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F47S C61L G86V L95R F160P",5
"lib2","SARS-CoV-2","GTAAAATGACGTTGAC",6,39.24,9.93,-0.9,0.06,2.7,1,0,">1 nonsynonymous","T55I S139V",2
"lib2","SARS-CoV-2","GTAAAATGAGAGGAAG",8,61.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S45F L95S N120F",3
"lib2","SARS-CoV-2","GTAAAATGATTTCTAG",10,0.55,NA,NA,NA,NA,NA,NA,"stop","L5* A22G K94M",3
"lib2","SARS-CoV-2","GTAAAATGCAAAGAAT",11,172.36,10.14,-0.69,0.04,2.93,1.07,0,">1 nonsynonymous","K87N G146A",2
"lib2","SARS-CoV-2","GTAAAATTATTAAACT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","I88F K128S G155* L162Q",4
"lib2","SARS-CoV-2","GTAAAATTCCAAAAAA",5,25.34,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G51F D90K N107R Q168T G174L",5
"lib2","SARS-CoV-2","GTAAAATTCCAGGTCA",1,69.14,6,-4.84,1.49,1.5,1.13,0.01,">1 nonsynonymous","A81P G86S L122S R136Q P161S Y178M",6
"lib2","SARS-CoV-2","GTAAAATTTCACTGGT",2,99.13,8.52,-2.32,0.12,2.16,1.16,0,">1 nonsynonymous","N107S A145R S200L",3
"lib2","SARS-CoV-2","GTAAAATTTGTAACAA",5,1.22,NA,NA,NA,NA,NA,NA,"stop","F44I F47* D97R P177T G196S",5
"lib2","SARS-CoV-2","GTAAAATTTGTTCACG",4,43.48,6,-4.84,1.02,1.5,1.1,0.02,">1 nonsynonymous","P54R A105P N118F",3
"lib2","SARS-CoV-2","GTAAACAAAACTTCCA",2,25.76,7.94,-2.9,0.44,1.5,1,0.05,">1 nonsynonymous","N1V A105F S129T E135G",4
"lib2","SARS-CoV-2","GTAAACAAACCGGCGC",1,6.99,6.62,-4.21,2,3,1.13,0,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","GTAAACAACTCAATGG",5,56.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45M A81F L122Q E141K",4
"lib2","SARS-CoV-2","GTAAACACCGAGGGCA",8,108.7,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D59L Q84M T170I Q176L",4
"lib2","SARS-CoV-2","GTAAACACCTCCGTAG",2,1.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S N13A A14S Y50L A67N L95S",6
"lib2","SARS-CoV-2","GTAAACACTTACAGAG",4,127.54,10.47,-0.37,0.05,2.93,1.05,0,">1 nonsynonymous","F44R L122E T201A",3
"lib2","SARS-CoV-2","GTAAACATCAACTATA",3,0.76,NA,NA,NA,NA,NA,NA,"stop","P7T I28P N118V G155H Y175*",5
"lib2","SARS-CoV-2","GTAAACATGTTAAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17L K56T Y91*",3
"lib2","SARS-CoV-2","GTAAACATTGTTCATA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6M T100* Y123R I142*",4
"lib2","SARS-CoV-2","GTAAACCAATTTGAAG",21,573.96,8.61,-2.23,0.07,2.46,1.07,0,">1 nonsynonymous","Q168S Q176R T201A",3
"lib2","SARS-CoV-2","GTAAACCACTAAGTAG",2,48.03,10.18,-0.65,0.09,2.75,1.05,0,">1 nonsynonymous","D34P L57D",2
"lib2","SARS-CoV-2","GTAAACCAGCTAACAT",2,41.7,9.17,-1.66,0.16,1.59,1.15,0.01,"1 nonsynonymous","R127T",1
"lib2","SARS-CoV-2","GTAAACCATAGCGTAT",13,142.01,10.83,-0.01,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GTAAACCATCAAAGAT",4,4.56,NA,NA,NA,NA,NA,NA,"stop","L122V Q168*",2
"lib2","SARS-CoV-2","GTAAACCCAAACAAAA",2,126.22,9.53,-1.3,0.04,2.88,1.11,0,"1 nonsynonymous","Y119H",1
"lib2","SARS-CoV-2","GTAAACCCACGTGAAA",5,44.35,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D90Y Y121N R136H Y143K F167Y P177S",6
"lib2","SARS-CoV-2","GTAAACCCATGTTTTA",9,138.59,10.64,-0.2,0.04,2.9,1.07,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GTAAACCCCAAGCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* T46I F99L N120L G146M",5
"lib2","SARS-CoV-2","GTAAACCCCGCATACA",9,1,NA,NA,NA,NA,NA,NA,"stop","D68* K87* G152Y",3
"lib2","SARS-CoV-2","GTAAACCCGAGTATGA",1,20.59,10.34,-0.5,0.05,3,1,0,">1 nonsynonymous","P7K N40H S184A",3
"lib2","SARS-CoV-2","GTAAACCGCATGAGGT",12,245.74,9.29,-1.55,0.05,2.93,1.07,0,">1 nonsynonymous","S53T G166T",2
"lib2","SARS-CoV-2","GTAAACCGCCCTGAAT",2,29.59,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10T S29V D98V C158I",4
"lib2","SARS-CoV-2","GTAAACCTACATCTTG",2,75.85,9.9,-0.93,0.07,2.51,1.06,0,">1 nonsynonymous","G83W G116R",2
"lib2","SARS-CoV-2","GTAAACCTGAATTTAA",8,48.06,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","F70K N130C",2
"lib2","SARS-CoV-2","GTAAACGATACAAGTG",6,107.14,10.19,-0.65,0.05,2.65,1.02,0,">1 nonsynonymous","D34Y S41W",2
"lib2","SARS-CoV-2","GTAAACGCACTGATCC",10,3.49,NA,NA,NA,NA,NA,NA,"stop","G51* G86P D98S E154P V181A G196V",6
"lib2","SARS-CoV-2","GTAAACGGAACATAAA",15,241.6,10.52,-0.32,0.04,2.93,1.05,0,">1 nonsynonymous","N58S T140I T201N",3
"lib2","SARS-CoV-2","GTAAACGGGTGCCACC",2,58.8,10.52,-0.31,0.04,2.89,1.05,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","GTAAACGGTTGAATAA",2,0.79,NA,NA,NA,NA,NA,NA,"stop","F44Y C49N D97E K114D T201*",5
"lib2","SARS-CoV-2","GTAAACGTATTGATGC",7,63.27,10.96,0.13,0.05,2.89,1.09,0,"1 nonsynonymous","F160Y",1
"lib2","SARS-CoV-2","GTAAACGTGAGAATTA",11,45.7,9.93,-0.9,0.12,1.94,1.05,0.01,">1 nonsynonymous","W23P A42P Q144E",3
"lib2","SARS-CoV-2","GTAAACGTTAAGGGGT",3,11.68,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","W23S N30M F99T G166R",4
"lib2","SARS-CoV-2","GTAAACGTTACGGTAA",5,14.36,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C61F D112V A145Q K199S",4
"lib2","SARS-CoV-2","GTAAACGTTGTAGAAC",4,47.87,8.83,-2.01,0.08,1.75,1.11,0,"1 nonsynonymous","L162W",1
"lib2","SARS-CoV-2","GTAAACTACATAAATA",3,31.32,10.74,-0.09,0.1,2.86,1.17,0.01,">1 nonsynonymous","A22R T55S",2
"lib2","SARS-CoV-2","GTAAACTACTGCTTAT",1,35.74,6,-4.84,1.84,3,1.27,0.01,">1 nonsynonymous","D97G Y119D P149S F160Y Y178K",5
"lib2","SARS-CoV-2","GTAAACTCTTAAATAA",4,55.76,9.79,-1.04,0.1,2.18,1.06,0,"1 nonsynonymous","F17G",1
"lib2","SARS-CoV-2","GTAAACTGAAATAAGT",4,21.3,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","A14D E141G G152T V182S",4
"lib2","SARS-CoV-2","GTAAACTGCGGGTATT",4,67.91,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y39R S53M Y119F G146R F160L T201E",6
"lib2","SARS-CoV-2","GTAAACTGGAATGTAA",16,236.66,10.02,-0.82,0.08,2.47,1.07,0,"1 nonsynonymous","A14Y",1
"lib2","SARS-CoV-2","GTAAACTTCTGAGATA",4,46.96,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F47L D75T G86I N107K P149L",5
"lib2","SARS-CoV-2","GTAAACTTGCGAACGT",3,0.63,NA,NA,NA,NA,NA,NA,"stop","L122* G152I",2
"lib2","SARS-CoV-2","GTAAACTTTATGTCAT",9,1.35,NA,NA,NA,NA,NA,NA,"stop","R25E V32* L125G G146N",4
"lib2","SARS-CoV-2","GTAAACTTTCCTCAAT",3,35.09,10.96,0.12,0.04,3,1.01,0,">1 nonsynonymous","A89S N130A",2
"lib2","SARS-CoV-2","GTAAACTTTGCCTATT",2,24.76,7.66,-3.18,0.41,1.5,1.09,0.06,">1 nonsynonymous","G101C N107K",2
"lib2","SARS-CoV-2","GTAAAGAAAAAACCAG",11,121.1,10.69,-0.15,0.03,2.91,1.05,0,">1 nonsynonymous","D97K F160T",2
"lib2","SARS-CoV-2","GTAAAGAAAATCGTAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81Y N92W I104R E135M",4
"lib2","SARS-CoV-2","GTAAAGAAACAAGGCT",5,32.62,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L5K A14I I72F Y121H N171E",5
"lib2","SARS-CoV-2","GTAAAGAAACATAACG",2,70.39,10.16,-0.67,0.06,2.7,1.03,0,"1 nonsynonymous","L162C",1
"lib2","SARS-CoV-2","GTAAAGAACCCAATGG",3,43.05,10.58,-0.25,0.06,2.89,1.1,0,">1 nonsynonymous","D90N S108T",2
"lib2","SARS-CoV-2","GTAAAGAAGCTTACGT",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S F167N",2
"lib2","SARS-CoV-2","GTAAAGACACAAGCAT",5,0,NA,NA,NA,NA,NA,NA,"stop","Y50S A105N T170*",3
"lib2","SARS-CoV-2","GTAAAGACCCGTCCAA",11,161.99,10.74,-0.09,0.03,2.93,1.09,0,"1 nonsynonymous","F160G",1
"lib2","SARS-CoV-2","GTAAAGACGTAGTATG",4,1.93,NA,NA,NA,NA,NA,NA,"stop","S41* D68T W106Y N157*",4
"lib2","SARS-CoV-2","GTAAAGAGATTAAGAT",9,187.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A89N A105L Y178L",3
"lib2","SARS-CoV-2","GTAAAGAGGGTTAATG",7,51.19,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","I88Q S113M F126L F160P",4
"lib2","SARS-CoV-2","GTAAAGATAGTTGGAA",3,31.77,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","G74Q A105R P133N P161L",4
"lib2","SARS-CoV-2","GTAAAGATTAAGTAAT",11,474.28,10.04,-0.8,0.03,2.93,1.04,0,"1 nonsynonymous","P177A",1
"lib2","SARS-CoV-2","GTAAAGCAATAACAAC",4,42.36,6.21,-4.62,0.39,1.5,1.1,0.01,">1 nonsynonymous","I2F V77Y G86R D112S",4
"lib2","SARS-CoV-2","GTAAAGCAGATGGCTA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10V D90S G116*",3
"lib2","SARS-CoV-2","GTAAAGCCATGCGCTT",7,75.06,10.84,0,0.04,2.98,1.04,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","GTAAAGCGATTAATAA",7,44.42,9.93,-0.91,0.1,1.9,1.08,0.01,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","GTAAAGCGGCATCAAC",3,16.51,6,-4.84,1.65,1.5,1.07,0.05,">1 nonsynonymous","N110M G117L Y143N F167P T201S",5
"lib2","SARS-CoV-2","GTAAAGCTAATATCGA",7,1.05,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib2","SARS-CoV-2","GTAAAGGATAGCATAA",2,12.73,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W106D V180W",2
"lib2","SARS-CoV-2","GTAAAGGATATAGATT",4,43.94,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","L5R K56R I104L L131D E141A",5
"lib2","SARS-CoV-2","GTAAAGGATTATAGTC",2,4.35,NA,NA,NA,NA,NA,NA,"stop","R27M A145* F156M",3
"lib2","SARS-CoV-2","GTAAAGGCCGGATCGA",7,85.73,10.61,-0.23,0.05,2.85,1.13,0,"1 nonsynonymous","G83E",1
"lib2","SARS-CoV-2","GTAAAGGGAAACACCT",12,75.95,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23C V37L A81F G86K K128Y V181S",6
"lib2","SARS-CoV-2","GTAAAGGGAAGCGCAG",5,89.82,9.99,-0.85,0.07,2.74,1.04,0,"1 nonsynonymous","S19Q",1
"lib2","SARS-CoV-2","GTAAAGGGACTATCAA",1,40.35,8.38,-2.46,0.16,2.98,1.15,0.01,">1 nonsynonymous","R27V S53C F126A",3
"lib2","SARS-CoV-2","GTAAAGGTCAAATCTA",4,27.09,8.14,-2.69,0.31,1.5,1.06,0.04,">1 nonsynonymous","T3P E10G G86S",3
"lib2","SARS-CoV-2","GTAAAGGTCCAAATGG",6,36.48,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C102D P149W T201G",3
"lib2","SARS-CoV-2","GTAAAGTAGATCTGCT",5,76.99,10.4,-0.44,0.05,2.86,1.06,0,">1 nonsynonymous","G9K F44P",2
"lib2","SARS-CoV-2","GTAAAGTCAGACGTAG",2,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F R179F",2
"lib2","SARS-CoV-2","GTAAAGTCATAGGTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T N58M D68V N107L V115H L125G Y159P",7
"lib2","SARS-CoV-2","GTAAAGTGAGGGACAT",9,68.45,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","T15D I28T S113I N120I F126R",5
"lib2","SARS-CoV-2","GTAAAGTGCTAGTTTG",1,16.41,9.48,-1.36,0.14,1.75,1.13,0.01,">1 nonsynonymous","T85A I88L P169T",3
"lib2","SARS-CoV-2","GTAAAGTTTTCGCATG",2,17.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","Y91K D97F A105M S113C",4
"lib2","SARS-CoV-2","GTAAATAAAAAGACGA",13,173.01,10.82,-0.02,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATAAACTAGTTG",2,6.07,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","W106K F167R",2
"lib2","SARS-CoV-2","GTAAATAAATCCCACG",5,50.2,10.88,0.04,0.06,2.91,1.08,0,">1 nonsynonymous","G9H R27V T201M",3
"lib2","SARS-CoV-2","GTAAATAACTGGCTAT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","R16I I88G Y121*",3
"lib2","SARS-CoV-2","GTAAATAAGATTGCAC",6,1.87,NA,NA,NA,NA,NA,NA,"stop","V32L Y159G T201*",3
"lib2","SARS-CoV-2","GTAAATACACAACCCT",7,22.99,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L60I N92K Q144Y",3
"lib2","SARS-CoV-2","GTAAATACAGTTGAAT",3,32.74,10.6,-0.24,0.11,2.78,1,0,">1 nonsynonymous","N58H D97I",2
"lib2","SARS-CoV-2","GTAAATACATTCAGAA",2,29.41,10.22,-0.62,0.06,2.93,1,0,">1 nonsynonymous","P7G Y178N P197G",3
"lib2","SARS-CoV-2","GTAAATACCAATTATG",3,0.85,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATAGAAGAAGTC",12,136.27,10.84,0,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATAGACGAGAGC",10,254.54,10.57,-0.27,0.02,2.93,1.04,0,">1 nonsynonymous","F44I T148L",2
"lib2","SARS-CoV-2","GTAAATAGATGACATA",9,40.99,8.29,-2.54,0.23,1.5,1.13,0.01,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","GTAAATAGCAGCAGAT",2,1.43,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATAGCTTCATTG",6,92.68,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I2F E10C L162R P177F",4
"lib2","SARS-CoV-2","GTAAATAGGACTAGTA",1,32.15,10.85,0.02,0.07,2.94,1.05,0,">1 nonsynonymous","S43L T85I T201P",3
"lib2","SARS-CoV-2","GTAAATAGTGAAGGGT",7,2.55,NA,NA,NA,NA,NA,NA,"stop","N107V P177*",2
"lib2","SARS-CoV-2","GTAAATATAAAATTTA",9,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41D N64I A81F G101A S113F T170S",6
"lib2","SARS-CoV-2","GTAAATATAATTACGT",1,49.99,10.17,-0.67,0.04,2.96,1,0,">1 nonsynonymous","N107C K198V",2
"lib2","SARS-CoV-2","GTAAATATATAAGTGA",13,116.93,6,-4.84,0.68,1.5,1.19,0.01,">1 nonsynonymous","L57R V181E",2
"lib2","SARS-CoV-2","GTAAATATGCACCCTT",7,78.44,8.15,-2.68,0.14,1.92,1.06,0.01,">1 nonsynonymous","F8C N118S E154K",3
"lib2","SARS-CoV-2","GTAAATATGTACATCT",4,8.45,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N107F E135T T148G",3
"lib2","SARS-CoV-2","GTAAATCAAAGTATCC",7,26.67,6.64,-4.19,0.68,1.5,1.2,0.04,">1 nonsynonymous","R136Y G146W",2
"lib2","SARS-CoV-2","GTAAATCAACGGATTC",1,27.45,10.77,-0.06,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATCAGATAAAAG",15,214.45,9.87,-0.96,0.07,2.24,1.08,0,">1 nonsynonymous","A42V D90E P96G",3
"lib2","SARS-CoV-2","GTAAATCCCCACTTTG",2,72.67,10.36,-0.48,0.05,2.89,1.01,0,"1 nonsynonymous","K56P",1
"lib2","SARS-CoV-2","GTAAATCCCCATCCTG",2,19.68,9.6,-1.23,0.21,1.88,1.04,0.02,">1 nonsynonymous","N130W E141G G152M",3
"lib2","SARS-CoV-2","GTAAATCCTGTCTCCG",2,16.19,10.82,-0.01,0.09,2.72,1.26,0,"1 nonsynonymous","T3H",1
"lib2","SARS-CoV-2","GTAAATCGAAAATTAA",4,38.41,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S19E S69G S184Q",3
"lib2","SARS-CoV-2","GTAAATCGATAAATAG",14,120.77,10.85,0.01,0.03,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATCGCAGATTCA",6,49.86,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","W23K S43R R127T G172R",4
"lib2","SARS-CoV-2","GTAAATCGTCCGTAAA",1,11.23,9.96,-0.88,0.1,3,1.03,0.01,">1 nonsynonymous","K56A Q84L L125S",3
"lib2","SARS-CoV-2","GTAAATCTATTCTTGT",8,159.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y93F Y119N E154F F167E K199T",5
"lib2","SARS-CoV-2","GTAAATCTGGATTGAA",2,100.12,10.64,-0.2,0.02,2.97,1.03,0,">1 nonsynonymous","F62T D98G",2
"lib2","SARS-CoV-2","GTAAATCTTAGATTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* D137L",2
"lib2","SARS-CoV-2","GTAAATGAACGAGATT",4,25.54,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","N4T V77Y P149F",3
"lib2","SARS-CoV-2","GTAAATGAAGACCATG",7,0.39,NA,NA,NA,NA,NA,NA,"stop","G146* G152V",2
"lib2","SARS-CoV-2","GTAAATGACCATGAAC",2,0.1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","GTAAATGACTGTGATA",1,50.98,10.75,-0.09,0.04,2.93,1.06,0,"1 nonsynonymous","A192C",1
"lib2","SARS-CoV-2","GTAAATGAGCGTTCTC",4,30.81,10.5,-0.34,0.04,2.92,1.09,0,">1 nonsynonymous","S45Y T201S",2
"lib2","SARS-CoV-2","GTAAATGATGAGTTCC",1,41.21,10.79,-0.05,0.06,2.97,1.01,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","GTAAATGCAGGCCTTT",12,199.91,9.64,-1.2,0.06,1.98,1.07,0,">1 nonsynonymous","K94S N130I",2
"lib2","SARS-CoV-2","GTAAATGCCACCAACT",28,287.72,10.81,-0.02,0.03,2.93,1.09,0,">1 nonsynonymous","L5W K128T",2
"lib2","SARS-CoV-2","GTAAATGCCCCAAGTA",3,15.42,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","V37H T55L V65R A89V P96L P169H",6
"lib2","SARS-CoV-2","GTAAATGGTCCATGGC",3,16.07,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P7W A81N S147A F156C N171M",5
"lib2","SARS-CoV-2","GTAAATGTATGGAATC",5,64.57,9.55,-1.29,0.12,1.94,1.07,0.01,">1 nonsynonymous","F12N R16E",2
"lib2","SARS-CoV-2","GTAAATGTGCTCGGAC",13,51,6,-4.84,0.62,2.11,1.15,0,">1 nonsynonymous","V71G G146H Y165M L183Y",4
"lib2","SARS-CoV-2","GTAAATGTTTCTTTCT",10,231.57,10.82,-0.01,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAATTAAATCTTTC",7,53.29,10.7,-0.13,0.05,2.99,1.04,0,">1 nonsynonymous","T100M F134Q",2
"lib2","SARS-CoV-2","GTAAATTACAAAATCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6F G9T C49S D68* N118Q G166T",6
"lib2","SARS-CoV-2","GTAAATTACCGCATTA",9,74.71,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G101D A105C V115R F167V",4
"lib2","SARS-CoV-2","GTAAATTATACGTAAC",13,178.32,7.94,-2.9,0.13,2.17,1.06,0.01,">1 nonsynonymous","K87H L122V Y143I G152W",4
"lib2","SARS-CoV-2","GTAAATTATCCAAACG",6,91.7,6.12,-4.71,0.27,2.26,1.1,0,">1 nonsynonymous","V37M Y121D F156S",3
"lib2","SARS-CoV-2","GTAAATTCGTTACGAA",4,15.04,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T63D G74T C102L G116L G117C",5
"lib2","SARS-CoV-2","GTAAATTCTCCTTGAA",2,0.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","GTAAATTGCATAAATA",6,102.45,10.43,-0.41,0.06,2.91,1.1,0,">1 nonsynonymous","I2M L38I V65T N130P",4
"lib2","SARS-CoV-2","GTAAATTTACCATGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* Y35G G86L",3
"lib2","SARS-CoV-2","GTAACAAAAAGCCTGC",3,45.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D98S W106V Y119I",3
"lib2","SARS-CoV-2","GTAACAAAAAGTAATA",6,186.97,10.85,0.01,0.05,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACAAAAGTACCAA",8,65.96,10.91,0.07,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACAAACAAACAAA",7,92.32,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K48A F167C G196A",3
"lib2","SARS-CoV-2","GTAACAAACCCAGGTT",8,242.97,10.75,-0.09,0.05,2.92,1.07,0,">1 nonsynonymous","G146S K198M",2
"lib2","SARS-CoV-2","GTAACAAAGCCGGTAC",8,77.92,10.91,0.07,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACAAATACCCTCA",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4W Y121K",2
"lib2","SARS-CoV-2","GTAACAAATCAAAACA",7,148.86,10.47,-0.37,0.03,2.93,1.05,0,"1 nonsynonymous","S19A",1
"lib2","SARS-CoV-2","GTAACAACAATACGGA",1,15.33,8.25,-2.59,0.24,1.59,1.03,0.02,">1 nonsynonymous","N109T P161S",2
"lib2","SARS-CoV-2","GTAACAACCCTGTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D D98S",2
"lib2","SARS-CoV-2","GTAACAACTCCATTGG",8,41.91,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I2G T15W P96G P133N T140K",5
"lib2","SARS-CoV-2","GTAACAAGACTATAAA",4,90.74,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T15C D90M G172S T201I",4
"lib2","SARS-CoV-2","GTAACAAGCTTGCCAG",4,14.05,9.89,-0.95,0.21,2.02,1.01,0.02,">1 nonsynonymous","F47Y I104T",2
"lib2","SARS-CoV-2","GTAACAAGGGGGTCAT",2,43.56,10.39,-0.44,0.05,2.93,1,0,">1 nonsynonymous","Y35G I104Y",2
"lib2","SARS-CoV-2","GTAACAATAGAGACTA",13,158.46,10.69,-0.14,0.05,2.89,1.09,0,">1 nonsynonymous","N4P N130C",2
"lib2","SARS-CoV-2","GTAACAATGACTCCTA",18,210.82,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P54R L57S D90V T100A N120P Q176P",6
"lib2","SARS-CoV-2","GTAACAATTAAGAATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","GTAACAATTAGTATTA",5,41.04,9.73,-1.1,0.08,1.92,1.12,0,">1 nonsynonymous","T3V P54F A105Q K114A L122S",5
"lib2","SARS-CoV-2","GTAACAATTTTCCAAG",4,41.63,10.77,-0.07,0.08,2.91,1.05,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","GTAACACACACCGATT",2,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H P82S A89D C102W L162W",5
"lib2","SARS-CoV-2","GTAACACACAGCACGT",2,40.68,10.87,0.04,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACACAGAAGTCTT",1,33.56,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91R F99K",2
"lib2","SARS-CoV-2","GTAACACCATGCCTGC",3,0.14,NA,NA,NA,NA,NA,NA,"stop","F8L C61*",2
"lib2","SARS-CoV-2","GTAACACCGCCCACCT",3,34.57,10.78,-0.05,0.04,3,1.03,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","GTAACACGAGAGATTA",2,23.47,10.7,-0.13,0.05,2.92,1.09,0,">1 nonsynonymous","D90S K128S",2
"lib2","SARS-CoV-2","GTAACACGTCCGGGGT",5,46.54,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S19G S43R D59R P82T K128S G152A",6
"lib2","SARS-CoV-2","GTAACACTAGCTCTCA",4,86.13,10.32,-0.52,0.07,2.83,1.05,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","GTAACACTCGTACAAG",8,128.26,10.81,-0.03,0.06,2.9,1.04,0,">1 nonsynonymous","S53N S139K",2
"lib2","SARS-CoV-2","GTAACACTGACCTGTA",1,0.48,NA,NA,NA,NA,NA,NA,"stop","G9L N118*",2
"lib2","SARS-CoV-2","GTAACACTTTATAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M A89L",2
"lib2","SARS-CoV-2","GTAACAGAAGAACATT",9,84.7,10.74,-0.1,0.05,2.94,1.08,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","GTAACAGACACTTCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33D P54S C61R D90* N109V C150D G174V",7
"lib2","SARS-CoV-2","GTAACAGGCCAAGCAA",4,1.63,NA,NA,NA,NA,NA,NA,"stop","A14N S113*",2
"lib2","SARS-CoV-2","GTAACAGGGATCATAT",13,225.97,10.63,-0.21,0.04,2.93,1.06,0,">1 nonsynonymous","T63Y P149H",2
"lib2","SARS-CoV-2","GTAACAGGTACCGGAT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y50K A192*",2
"lib2","SARS-CoV-2","GTAACAGGTGTAAGAA",1,65.13,9.69,-1.14,0.07,2.07,1.04,0,">1 nonsynonymous","Y39H A105V T148Y",3
"lib2","SARS-CoV-2","GTAACAGTCTTCTACA",12,60.92,6,-4.84,1.04,1.5,1.08,0.01,">1 nonsynonymous","T85E N92Y",2
"lib2","SARS-CoV-2","GTAACAGTTCTAGTCA",8,156.77,10.02,-0.81,0.07,2.47,1.03,0,"1 nonsynonymous","V103T",1
"lib2","SARS-CoV-2","GTAACATAAAATTTAG",3,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N K128M",2
"lib2","SARS-CoV-2","GTAACATAAACGCGGT",6,10.53,6.01,-4.83,2,1.5,1.24,0.08,">1 nonsynonymous","C49Q S139R E154Y F160N",4
"lib2","SARS-CoV-2","GTAACATACTGCTCTT",8,42.12,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G83C N107L S139L G174P",4
"lib2","SARS-CoV-2","GTAACATATAGTAAGG",5,60.38,10.59,-0.25,0.06,2.92,1.11,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","GTAACATCGAAAAGTG",7,101.1,8.09,-2.75,0.12,1.64,1.15,0,">1 nonsynonymous","E10H D98G G117V",3
"lib2","SARS-CoV-2","GTAACATCTCAGAGAC",4,29.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V32K G51L A89G K114E",4
"lib2","SARS-CoV-2","GTAACATGACAACTTA",11,52.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A14Y Y21I P54T",3
"lib2","SARS-CoV-2","GTAACATTAAGATAAA",6,1.63,NA,NA,NA,NA,NA,NA,"stop","R73* L122Y",2
"lib2","SARS-CoV-2","GTAACCAAACACAATT",3,59.43,10.81,-0.03,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACCAAACATCAGT",4,164.17,8.49,-2.34,0.11,1.69,1.1,0,"1 nonsynonymous","S108K",1
"lib2","SARS-CoV-2","GTAACCAATCCGCAAT",4,80.61,10.82,-0.01,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACCAATTGACTGA",7,165.91,10.87,0.03,0.04,2.91,1.08,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","GTAACCACAGATATAT",1,20.23,9.81,-1.03,0.13,2.07,1,0.01,">1 nonsynonymous","G51V P149L",2
"lib2","SARS-CoV-2","GTAACCACATTACCTT",4,8.98,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","S19L G83I",2
"lib2","SARS-CoV-2","GTAACCAGAATCCAAT",7,127.66,10.25,-0.59,0.06,2.81,1.06,0,">1 nonsynonymous","A18T S139N",2
"lib2","SARS-CoV-2","GTAACCAGAGACCCCC",3,19.18,8.57,-2.27,0.32,1.5,1.08,0.04,">1 nonsynonymous","V11S A89P",2
"lib2","SARS-CoV-2","GTAACCAGATTAAAGC",7,143.26,9.89,-0.95,0.06,2.91,1.07,0,">1 nonsynonymous","A22R L125Q",2
"lib2","SARS-CoV-2","GTAACCAGGGCTTCAA",7,47.18,6,-4.84,1.5,1.5,1.2,0.02,">1 nonsynonymous","S19E P82M N92F G116S",4
"lib2","SARS-CoV-2","GTAACCATGAACTGAG",8,67.78,10.77,-0.06,0.05,2.92,1.1,0,"1 nonsynonymous","Y66T",1
"lib2","SARS-CoV-2","GTAACCATGAAGCAAG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","I2G S43M P149*",3
"lib2","SARS-CoV-2","GTAACCATGATTCCGC",4,4.6,NA,NA,NA,NA,NA,NA,"stop","F44* L183*",2
"lib2","SARS-CoV-2","GTAACCCAACGAACTA",3,9.04,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V181E",1
"lib2","SARS-CoV-2","GTAACCCACACCATAC",1,33.27,8.12,-2.72,0.44,1.5,1.01,0.07,">1 nonsynonymous","Y123L P161H",2
"lib2","SARS-CoV-2","GTAACCCACGCTCTCT",4,75.2,10.07,-0.76,0.07,2.62,1.08,0,">1 nonsynonymous","Y39R V52S",2
"lib2","SARS-CoV-2","GTAACCCATTAGTTAG",11,84.76,10.87,0.03,0.03,2.95,1.05,0,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","GTAACCCCCACTTAAT",2,35.2,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F62R F99H F134Q T148N",4
"lib2","SARS-CoV-2","GTAACCCCCTCCGGAT",1,19.07,9.97,-0.87,0.03,2.93,1,0,">1 nonsynonymous","C31L F160S",2
"lib2","SARS-CoV-2","GTAACCCCTGAATTTA",10,70.62,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I28E D34V F99S L122M K132I E141G P149L",7
"lib2","SARS-CoV-2","GTAACCCGAGAATCCA",3,38.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28M K94T A105M T148L",4
"lib2","SARS-CoV-2","GTAACCCTACTAAAAA",6,29.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Y C49D T55A L60T Q84S A89F",6
"lib2","SARS-CoV-2","GTAACCCTCTACCAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R F167R",2
"lib2","SARS-CoV-2","GTAACCGAAAAGCCAG",6,125.51,8.26,-2.58,0.18,1.5,1.1,0.02,">1 nonsynonymous","N13C Y119C V153L",3
"lib2","SARS-CoV-2","GTAACCGACAGGACTT",1,0.96,NA,NA,NA,NA,NA,NA,"stop","S36D A42G K87G L125S Q144*",5
"lib2","SARS-CoV-2","GTAACCGCCAATAGCG",9,76.92,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N1Y Y66T F70L D97N L162S",5
"lib2","SARS-CoV-2","GTAACCGCTAGTTGTC",9,47.51,10.83,0,0.05,2.97,1.05,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","GTAACCGGAAACATTT",14,181.16,10.72,-0.12,0.03,2.93,1.07,0,"1 nonsynonymous","R78M",1
"lib2","SARS-CoV-2","GTAACCTATATCATGG",9,128.1,10.69,-0.14,0.04,2.93,1.06,0,"1 nonsynonymous","V65A",1
"lib2","SARS-CoV-2","GTAACCTCCCTGCCAC",1,175.43,10.63,-0.21,0.04,2.87,1.12,0,">1 nonsynonymous","N64L T201L",2
"lib2","SARS-CoV-2","GTAACCTCTACCACGG",5,63.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24K C49F Y93K",3
"lib2","SARS-CoV-2","GTAACCTGAATAAGCG",3,42.84,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","G83W G101D",2
"lib2","SARS-CoV-2","GTAACCTGACGAGTAC",2,100.23,10.16,-0.67,0.07,2.54,1.03,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","GTAACGAAACAACGCT",4,49.69,10.59,-0.25,0.06,2.93,1.07,0,">1 nonsynonymous","I2G P54T",2
"lib2","SARS-CoV-2","GTAACGAAATCCGTGC",4,36.92,10.01,-0.83,0.07,2.89,1.02,0,">1 nonsynonymous","S41I Y121L K128N F160W",4
"lib2","SARS-CoV-2","GTAACGAGAGCCTAGA",4,18.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35N V65H W106V",3
"lib2","SARS-CoV-2","GTAACGAGTGAAATAC",2,14.65,10.83,0,0.05,2.94,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","GTAACGATTAAGGTAA",5,20.49,9.49,-1.35,0.14,2.16,1.07,0.01,">1 nonsynonymous","T85M Y175F",2
"lib2","SARS-CoV-2","GTAACGATTGAGATAC",6,190.69,9.48,-1.36,0.04,2.95,1.08,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","GTAACGCCCAGAAAAG",6,45.94,10.28,-0.55,0.04,2.88,1.07,0,">1 nonsynonymous","G83Y K132P",2
"lib2","SARS-CoV-2","GTAACGCGACAGCATT",3,0.44,NA,NA,NA,NA,NA,NA,"stop","I2L P7A N64V I72C Q79L G83V S113D K132* P149V",9
"lib2","SARS-CoV-2","GTAACGCGCAGTAATA",4,29.34,10.87,0.03,0.11,2.84,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACGCTAAAAATAT",2,55.23,8.89,-1.95,0.09,2.35,1.02,0,">1 nonsynonymous","A81V E154Y",2
"lib2","SARS-CoV-2","GTAACGCTGTCACCCC",8,23.88,6.21,-4.62,0.29,3,1.11,0,">1 nonsynonymous","T85I L95Q V182S",3
"lib2","SARS-CoV-2","GTAACGCTTTAAGGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107M F126G Q144I P197S",4
"lib2","SARS-CoV-2","GTAACGGAAGCGACTT",13,86.28,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F70E F99Y V103A P149L F167T",5
"lib2","SARS-CoV-2","GTAACGGATCAAGCAA",3,61.26,7.07,-3.77,0.19,1.77,1.13,0.01,">1 nonsynonymous","A14Q K56I Y143R",3
"lib2","SARS-CoV-2","GTAACGGATGTGTTAA",2,24.33,8.46,-2.38,0.19,2.91,1.08,0.01,">1 nonsynonymous","E141P N157M",2
"lib2","SARS-CoV-2","GTAACGGGACTAAAAT",7,40.24,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","L95P W106E",2
"lib2","SARS-CoV-2","GTAACGGTAAGTATAA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","G9T V37S N107L G166*",4
"lib2","SARS-CoV-2","GTAACGTATCGACGAA",4,42.86,10.84,0.01,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACGTATGCGGATC",6,103.53,9.81,-1.03,0.06,2.27,1.07,0,">1 nonsynonymous","E10R A18V",2
"lib2","SARS-CoV-2","GTAACGTTTTATCTGC",5,66.17,10.86,0.02,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACTAAGAAAGGCC",6,127.84,7.69,-3.14,0.21,1.5,1.08,0.02,">1 nonsynonymous","I138R Q176C",2
"lib2","SARS-CoV-2","GTAACTACAAGCTACG",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T L60S V71W",3
"lib2","SARS-CoV-2","GTAACTACATCCCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","V153*",1
"lib2","SARS-CoV-2","GTAACTAGGGGCAGAC",3,52.81,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L122T N130W C158N",3
"lib2","SARS-CoV-2","GTAACTATAAATTACG",10,175.96,10.85,0.02,0.04,2.92,1.08,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","GTAACTATAGTGGTTA",5,65.78,10.78,-0.05,0.05,2.86,1.1,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","GTAACTATGTAACTAA",1,10.7,8.78,-2.06,0.13,3,1.05,0.01,">1 nonsynonymous","L95V F126R T148E",3
"lib2","SARS-CoV-2","GTAACTATTTAATAAG",8,92.94,9.74,-1.1,0.1,1.88,1.06,0,">1 nonsynonymous","N4T Y50I N64F",3
"lib2","SARS-CoV-2","GTAACTCATCAGATTG",6,7.47,NA,NA,NA,NA,NA,NA,"stop","S45W N130*",2
"lib2","SARS-CoV-2","GTAACTCCAAATTGCT",2,70.13,6.66,-4.17,0.16,2.08,1.12,0,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","GTAACTCCTATTCTAC",4,42.65,10.32,-0.51,0.06,2.94,1.03,0,">1 nonsynonymous","N58W K132R",2
"lib2","SARS-CoV-2","GTAACTCTCCTTGACA",2,13.27,6,-4.84,1.62,1.5,1.12,0.02,">1 nonsynonymous","Y21S A81L V103G N120W",4
"lib2","SARS-CoV-2","GTAACTCTTAAAGTTT",4,75.14,9.9,-0.93,0.07,2.23,1.06,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","GTAACTCTTAGAGGAC",5,7.14,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V20L T55R K94W",3
"lib2","SARS-CoV-2","GTAACTCTTGGACCAT",3,86.85,8.56,-2.28,0.08,2.57,1.05,0,">1 nonsynonymous","D98Q A145P",2
"lib2","SARS-CoV-2","GTAACTCTTTATTCAA",2,61.11,6.02,-4.82,0.53,1.65,1.13,0,">1 nonsynonymous","I2D P7L F17S Y50C T85Y",5
"lib2","SARS-CoV-2","GTAACTGAAAAAGACC",2,53.94,7.82,-3.02,0.2,1.5,1.05,0.01,">1 nonsynonymous","Y91V N118S S129L",3
"lib2","SARS-CoV-2","GTAACTGAATTGGCAC",6,75.42,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I2M V37Q S45T Y93D Q168V",5
"lib2","SARS-CoV-2","GTAACTGCCAAAAGGT",3,0.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","GTAACTGCCAAAGCAT",11,3.45,NA,NA,NA,NA,NA,NA,"stop","N171* S184T",2
"lib2","SARS-CoV-2","GTAACTGCGGTAAAGA",9,127.5,10.75,-0.09,0.03,2.98,1.01,0,">1 nonsynonymous","L60C N151Q",2
"lib2","SARS-CoV-2","GTAACTGCTACTATGC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","T3E A42R Y50P V103*",4
"lib2","SARS-CoV-2","GTAACTGGTCTCAGAG",4,8.26,NA,NA,NA,NA,NA,NA,"stop","E10S I28* K87I",3
"lib2","SARS-CoV-2","GTAACTGGTTTATAAA",2,1.16,NA,NA,NA,NA,NA,NA,"stop","D59L Y91I F134L E141*",4
"lib2","SARS-CoV-2","GTAACTGTAAATGTAA",5,79.32,10.84,0,0.06,2.94,1.09,0,">1 nonsynonymous","I2R F44W",2
"lib2","SARS-CoV-2","GTAACTGTACGGTGTT",2,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N G51F L60K D90G",4
"lib2","SARS-CoV-2","GTAACTTAATAATGAT",1,30.34,10.82,-0.01,0.09,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAACTTCGAAACTAA",8,139.27,6.01,-4.82,1.48,1.5,1.29,0.03,">1 nonsynonymous","F44T C49I",2
"lib2","SARS-CoV-2","GTAACTTCTAGTTAAA",10,94.06,7.99,-2.85,0.11,1.5,1.12,0,">1 nonsynonymous","T63G Y123G E135M",3
"lib2","SARS-CoV-2","GTAACTTTAGTATTCT",3,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58H R127M S139N V182K",4
"lib2","SARS-CoV-2","GTAACTTTGAATAAGG",7,99.5,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G9L Y39S Y159K Y165S G172L",5
"lib2","SARS-CoV-2","GTAACTTTTACTAGTC",12,59.61,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y21C G117P K128T",3
"lib2","SARS-CoV-2","GTAAGAAAAATTTGGA",1,19.11,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","L5A L38S T55P G146E Y178T T201E",6
"lib2","SARS-CoV-2","GTAAGAAAACATTCGG",5,40.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58F D97L I104T Y119L",4
"lib2","SARS-CoV-2","GTAAGAAAATAAGTTT",9,155.49,10.1,-0.73,0.02,2.91,1.03,0,"1 nonsynonymous","C31G",1
"lib2","SARS-CoV-2","GTAAGAAACCGAGAAT",13,168.5,10.78,-0.05,0.04,2.94,1.05,0,">1 nonsynonymous","K56H D97T",2
"lib2","SARS-CoV-2","GTAAGAAATAGAGAAG",3,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P V32G D75L I88T W106G T201V",6
"lib2","SARS-CoV-2","GTAAGAACAACGCTTA",6,45.03,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R73I N118S K128V F167T E186S",5
"lib2","SARS-CoV-2","GTAAGAACGATACTGA",6,24.08,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7I G74F Y121H R127P V182G",5
"lib2","SARS-CoV-2","GTAAGAAGCAAAATGA",2,34.05,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G86V T100F P133S",3
"lib2","SARS-CoV-2","GTAAGAAGGTGCAAGG",3,8.32,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","C61Y T100A A105S D112L",4
"lib2","SARS-CoV-2","GTAAGAATATGTACAC",2,9.89,8.5,-2.33,0.55,1.5,1,0.06,">1 nonsynonymous","I88G D98K S129I",3
"lib2","SARS-CoV-2","GTAAGAATATTCGAGC",4,43.75,10.5,-0.34,0.07,2.88,1.06,0,">1 nonsynonymous","F12L G196R",2
"lib2","SARS-CoV-2","GTAAGAATGTAACCAA",9,150.67,8.27,-2.57,0.14,2.24,1.07,0.01,">1 nonsynonymous","K26L Y39D Y119P T170G T201G",5
"lib2","SARS-CoV-2","GTAAGACCACGCTCAC",12,155.41,10.84,0,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAGACCAGTCCTAC",5,0,NA,NA,NA,NA,NA,NA,"stop","R25V F160*",2
"lib2","SARS-CoV-2","GTAAGACCCGATTGTA",14,112.63,10.81,-0.02,0.06,2.91,1.11,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","GTAAGACTCACGCTTG",1,53.77,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K87P S129N P177V",3
"lib2","SARS-CoV-2","GTAAGACTCAGACGGC",20,566.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16G I80Y F160S T201D",4
"lib2","SARS-CoV-2","GTAAGAGAAAAGATCT",1,18.17,8.84,-2,0.26,1.5,1.11,0.04,">1 nonsynonymous","A81V Q144Y",2
"lib2","SARS-CoV-2","GTAAGAGATGGAATTA",4,61.45,10.33,-0.5,0.08,2.77,1.11,0,">1 nonsynonymous","N64D E141W T201M",3
"lib2","SARS-CoV-2","GTAAGAGATGTTGACT",7,143.78,10.65,-0.19,0.03,2.92,1.08,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","GTAAGAGCTGATATTT",6,227.57,7.97,-2.87,0.13,1.61,1.09,0.01,">1 nonsynonymous","V32L N40S S69M F156C",4
"lib2","SARS-CoV-2","GTAAGAGGAAGTCGAT",5,40.28,9.74,-1.09,0.13,1.86,1.14,0.01,">1 nonsynonymous","A14G I104T S129G",3
"lib2","SARS-CoV-2","GTAAGAGGGCCCCTAC",2,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96V D112M L183E P197E",4
"lib2","SARS-CoV-2","GTAAGAGTTGGGCCAG",5,113.07,10.56,-0.28,0.04,2.93,1.05,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","GTAAGAGTTTCACGGA",4,28.61,6,-4.84,1.66,3,1.14,0.01,">1 nonsynonymous","G116V E135F A145L F167Y",4
"lib2","SARS-CoV-2","GTAAGATAACCCATAC",14,115.09,6.77,-4.07,0.26,1.5,1.16,0.01,">1 nonsynonymous","G74L D90S V173Q",3
"lib2","SARS-CoV-2","GTAAGATAAGATTTGT",2,0.94,NA,NA,NA,NA,NA,NA,"stop","N4* T55Y S108W Y143L",4
"lib2","SARS-CoV-2","GTAAGATAATGCTCGG",1,36.56,6,-4.84,2,3,1.26,0,">1 nonsynonymous","G83S P96L V173G",3
"lib2","SARS-CoV-2","GTAAGATATCCCCATT",23,3.44,NA,NA,NA,NA,NA,NA,"stop","T63* F70V G146K L183P",4
"lib2","SARS-CoV-2","GTAAGATCCTTCTTTA",12,7.91,8.55,-2.29,0.27,2.4,1.2,0.03,">1 nonsynonymous","S41A W106V S139L G152C F167A P177Y",6
"lib2","SARS-CoV-2","GTAAGATCTAACGAAT",6,3.13,NA,NA,NA,NA,NA,NA,"stop","P54A L95* L162F F167T",4
"lib2","SARS-CoV-2","GTAAGATGTACGTTTT",12,3.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I N64P P96T P161N",4
"lib2","SARS-CoV-2","GTAAGATTTTTCACAT",1,66.89,9.89,-0.95,0.09,1.99,1.02,0,">1 nonsynonymous","Y35K S41V N110Q F134L",4
"lib2","SARS-CoV-2","GTAAGCAAAAGCTGTC",13,188.29,10.68,-0.16,0.02,2.97,1.03,0,"1 nonsynonymous","L183I",1
"lib2","SARS-CoV-2","GTAAGCAAATAATAAA",6,88.81,10.81,-0.03,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAGCAACACTTCAA",2,44.77,10.65,-0.19,0.03,2.93,1.04,0,">1 nonsynonymous","E10S V32W",2
"lib2","SARS-CoV-2","GTAAGCAACTTAGGTA",16,134.75,9.23,-1.61,0.15,1.52,1.11,0.01,">1 nonsynonymous","L38S S184K",2
"lib2","SARS-CoV-2","GTAAGCACAATGTCTA",2,27.32,6.07,-4.76,0.87,1.5,1.13,0.02,">1 nonsynonymous","W106M G146L",2
"lib2","SARS-CoV-2","GTAAGCAGAAACTACA",2,54.81,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N107F P161S",2
"lib2","SARS-CoV-2","GTAAGCAGCTACTCAA",4,46.15,9.44,-1.4,0.12,1.78,1.1,0.01,">1 nonsynonymous","A81T F185I",2
"lib2","SARS-CoV-2","GTAAGCAGGGTCCCCG",7,80.33,10.8,-0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAGCAGTATTCAGA",6,66.99,10.38,-0.46,0.05,2.9,1.04,0,"1 nonsynonymous","R127A",1
"lib2","SARS-CoV-2","GTAAGCATAGAACGAA",3,32.86,9.26,-1.58,0.18,1.6,1.11,0.01,">1 nonsynonymous","Y91A T140M V182I",3
"lib2","SARS-CoV-2","GTAAGCATATGCCAAC",3,27.51,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14C P161L",2
"lib2","SARS-CoV-2","GTAAGCATATTCAAAT",3,31.25,8.22,-2.61,0.13,2.72,1.13,0.01,">1 nonsynonymous","N1H Y143Q G196N",3
"lib2","SARS-CoV-2","GTAAGCATTTAGTCTA",7,43.56,9.52,-1.31,0.06,2.77,1.02,0,">1 nonsynonymous","G9T T170R",2
"lib2","SARS-CoV-2","GTAAGCCGCCGAATAC",3,32.96,9.78,-1.05,0.12,2.73,1.01,0,">1 nonsynonymous","V11Y R27L T148M",3
"lib2","SARS-CoV-2","GTAAGCCTGATGATAT",4,40.47,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A105T P177Q",2
"lib2","SARS-CoV-2","GTAAGCGGCAACTATT",12,151.83,10.85,0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAGCGTACGCAATC",12,250.35,10.85,0.01,0.04,2.94,1.08,0,"1 nonsynonymous","R16D",1
"lib2","SARS-CoV-2","GTAAGCGTTTACCAGG",13,43.15,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","K48A Q84L D98N G117A E141M E154Q G166R",7
"lib2","SARS-CoV-2","GTAAGCTCATCTCGCC",3,68.15,10.43,-0.4,0.03,2.96,1.04,0,">1 nonsynonymous","F8M K26L F160Y",3
"lib2","SARS-CoV-2","GTAAGCTCCGCTGCCC",8,92.15,10.84,0.01,0.05,2.92,1.09,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","GTAAGGAATAGAAAAT",8,100.53,10.67,-0.17,0.03,2.93,1.07,0,">1 nonsynonymous","K48H L95I",2
"lib2","SARS-CoV-2","GTAAGGATATGAAGTA",7,9.02,NA,NA,NA,NA,NA,NA,"stop","N30* D97T",2
"lib2","SARS-CoV-2","GTAAGGATGAACTATC",3,9.31,7.57,-3.26,0.29,1.91,1.36,0.03,">1 nonsynonymous","T15R T55G T100G",3
"lib2","SARS-CoV-2","GTAAGGATGGTCTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60E R136D Q144S",3
"lib2","SARS-CoV-2","GTAAGGCAGTAAAAAG",1,43.11,10.24,-0.6,0.1,2.77,1,0,"1 nonsynonymous","L57C",1
"lib2","SARS-CoV-2","GTAAGGCATCGAACGG",1,23.8,8.97,-1.87,0.09,1.57,1.02,0,"1 nonsynonymous","W23L",1
"lib2","SARS-CoV-2","GTAAGGCATGTGTATA",13,83.5,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y93D N110S V181I P197T",4
"lib2","SARS-CoV-2","GTAAGGCCTACAATTC",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19D A42N G83N D90W D97T G116T",6
"lib2","SARS-CoV-2","GTAAGGCGATAAGCAA",6,107.85,10.65,-0.18,0.05,2.88,1.03,0,">1 nonsynonymous","G83A A192H",2
"lib2","SARS-CoV-2","GTAAGGCTCAATAAAA",13,0.71,NA,NA,NA,NA,NA,NA,"stop","C31F K48Q C158*",3
"lib2","SARS-CoV-2","GTAAGGGAGTTCCACA",6,72.67,10.85,0.01,0.05,3,1.03,0,">1 nonsynonymous","N64V P149G",2
"lib2","SARS-CoV-2","GTAAGGGCGGCGGTTA",5,34.93,10.77,-0.07,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAAGGGCTCTGACTA",7,114.21,10.26,-0.58,0.04,2.87,1.04,0,">1 nonsynonymous","S41H L122R K128V N151T S184Y",5
"lib2","SARS-CoV-2","GTAAGGGGATTCGGCC",5,128.05,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20S V37K Y50L Y66L P96M Y178C",6
"lib2","SARS-CoV-2","GTAAGGTAATCTGTGC",6,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89I P149E",2
"lib2","SARS-CoV-2","GTAAGGTACCTCCTGG",6,150.06,9.18,-1.66,0.03,2.95,1.06,0,">1 nonsynonymous","Y119M G152D",2
"lib2","SARS-CoV-2","GTAAGGTACGCAAAAG",6,221.25,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37S G51S P96G Y175S T201R",5
"lib2","SARS-CoV-2","GTAAGGTACGCCCAAA",1,23.74,10.77,-0.07,0.05,2.85,1.16,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","GTAAGGTAGACGAACT",9,344.02,9.98,-0.86,0.02,2.9,1.07,0,">1 nonsynonymous","K48S A145E",2
"lib2","SARS-CoV-2","GTAAGGTATGTAAGAA",5,0.51,NA,NA,NA,NA,NA,NA,"stop","G9S P96*",2
"lib2","SARS-CoV-2","GTAAGGTATTATGAAA",5,107.52,6.24,-4.6,0.9,1.5,1.3,0.03,">1 nonsynonymous","I28M V77R R136L Y165S",4
"lib2","SARS-CoV-2","GTAAGGTGAAAATGTA",6,73.04,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","G101A",1
"lib2","SARS-CoV-2","GTAAGGTTATAAAAAT",15,77.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59L P82M",2
"lib2","SARS-CoV-2","GTAAGTAAAGTCTTTT",5,132.26,10.46,-0.38,0.06,2.9,1.07,0,">1 nonsynonymous","A14S S41G",2
"lib2","SARS-CoV-2","GTAAGTACAAAAAGTT",5,16.35,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T55A K87V Y93V Y123R",4
"lib2","SARS-CoV-2","GTAAGTACCACCAGAC",3,26.89,10.9,0.06,0.09,2.83,1.13,0,">1 nonsynonymous","N151Y S200T",2
"lib2","SARS-CoV-2","GTAAGTACTTACACAT",8,107.9,6,-4.84,2,3,1.21,0,">1 nonsynonymous","L95W P197D",2
"lib2","SARS-CoV-2","GTAAGTAGCAGTGTTA",6,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60N K128Y G155V V173P F185S",5
"lib2","SARS-CoV-2","GTAAGTATATCATGTT",3,21.93,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T55L Y93V N107I S164G Q176S",5
"lib2","SARS-CoV-2","GTAAGTATCGACCACT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","W23E D59* E135Q",3
"lib2","SARS-CoV-2","GTAAGTATCGATAGAC",5,39.63,9.6,-1.24,0.1,2.02,1.03,0.01,">1 nonsynonymous","A89F T100L",2
"lib2","SARS-CoV-2","GTAAGTCACAATTAAC",6,111.28,10.73,-0.11,0.06,2.82,1.16,0,"1 nonsynonymous","G196V",1
"lib2","SARS-CoV-2","GTAAGTCTACTTCTAT",21,44.33,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D34P K94Y Y165V",3
"lib2","SARS-CoV-2","GTAAGTCTGAACACCA",6,2.27,NA,NA,NA,NA,NA,NA,"stop","N1P L5H R16W G51L K87*",5
"lib2","SARS-CoV-2","GTAAGTCTTTATAAAA",9,70.59,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14G N92M F160R",3
"lib2","SARS-CoV-2","GTAAGTGAATTAAGAA",9,79.08,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","R124C",1
"lib2","SARS-CoV-2","GTAAGTGAATTTGTAT",9,172.05,10.62,-0.22,0.05,2.94,1.04,0,">1 nonsynonymous","N58C N130H",2
"lib2","SARS-CoV-2","GTAAGTGAGATGTTAA",6,65.73,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C49D L57G A89C G146V",4
"lib2","SARS-CoV-2","GTAAGTGTACAAATAG",2,0.78,NA,NA,NA,NA,NA,NA,"stop","K87T S147*",2
"lib2","SARS-CoV-2","GTAAGTGTCTGAAAAC",6,198.52,6.41,-4.43,0.38,1.5,1.11,0.01,">1 nonsynonymous","T63F Q176V",2
"lib2","SARS-CoV-2","GTAAGTGTTATAGGCA",5,164.33,10.67,-0.17,0.04,2.98,1.02,0,">1 nonsynonymous","F62E D97P L122R",3
"lib2","SARS-CoV-2","GTAAGTGTTGACATTT",2,56.56,6.23,-4.61,0.35,1.64,1.15,0.01,">1 nonsynonymous","N4L Y91W S113G Y119N",4
"lib2","SARS-CoV-2","GTAAGTTATACGGTTT",5,154.12,10.05,-0.79,0.03,2.92,1.05,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","GTAAGTTTACAGAGCA",10,119.74,10.94,0.1,0.04,2.93,1.09,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","GTAAGTTTGTTAGGCG",3,9.45,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T3M G9A S69V W106R E141L L188T",6
"lib2","SARS-CoV-2","GTAATAAAAATGGCGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L Y165F",2
"lib2","SARS-CoV-2","GTAATAAAACAATGAC",5,32.23,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F8M G86L I142W F156L",4
"lib2","SARS-CoV-2","GTAATAAAAGATAACA",2,8.9,10.58,-0.25,0.11,2.94,1.08,0.01,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","GTAATAAAATGTAATC",9,85.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28E A81I P82T G155T V173K",5
"lib2","SARS-CoV-2","GTAATAAACGTTGCAA",16,3.09,NA,NA,NA,NA,NA,NA,"stop","C6K S19L N58T A81E T85* G116*",6
"lib2","SARS-CoV-2","GTAATAAACTGATTGT",10,51.42,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3K L38S A42N C49V L95S L125S",6
"lib2","SARS-CoV-2","GTAATAAAGACGATTC",3,6.03,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L183S",1
"lib2","SARS-CoV-2","GTAATAACGATACGAT",3,48.04,10.28,-0.56,0.07,2.89,1.11,0,">1 nonsynonymous","T100K Y178V",2
"lib2","SARS-CoV-2","GTAATAACTATTACAT",3,55.21,10.75,-0.09,0.04,2.86,1.14,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","GTAATAAGACATGCCT",2,31.96,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","C61H G152K P177I A190S",4
"lib2","SARS-CoV-2","GTAATAAGACCAATAA",29,441.76,9.89,-0.95,0.05,2.6,1.06,0,">1 nonsynonymous","Y35T N120R P149C",3
"lib2","SARS-CoV-2","GTAATAAGGTTACTCC",8,98.14,10.59,-0.25,0.04,2.94,1.05,0,"1 nonsynonymous","E10H",1
"lib2","SARS-CoV-2","GTAATAAGTGGAAAAT",2,21.13,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","C6M K87W S147V C158P",4
"lib2","SARS-CoV-2","GTAATAATACATGTTG",3,14.63,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","V103D G117S S139T T170S",4
"lib2","SARS-CoV-2","GTAATAATCGGACACT",1,0.58,NA,NA,NA,NA,NA,NA,"stop","D137T F156*",2
"lib2","SARS-CoV-2","GTAATACAACATAGTT",2,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q S45L L95N",3
"lib2","SARS-CoV-2","GTAATACACATATTAA",3,10.77,10.93,0.1,0.04,3,1.01,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","GTAATACATGCGCCTT",4,21.1,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","K56R I80Y F99Y F126G P149T",5
"lib2","SARS-CoV-2","GTAATACGATCGCCCG",9,0.46,NA,NA,NA,NA,NA,NA,"stop","T15* D112V",2
"lib2","SARS-CoV-2","GTAATACGCACCTCTA",6,112.79,9.71,-1.13,0.09,1.89,1.11,0,">1 nonsynonymous","I28N V173F",2
"lib2","SARS-CoV-2","GTAATACTGATTTACT",9,302.84,10.8,-0.04,0.03,2.92,1.09,0,"1 nonsynonymous","D97H",1
"lib2","SARS-CoV-2","GTAATACTGTGATCAG",3,50.84,9.77,-1.07,0.1,2.04,1.14,0,">1 nonsynonymous","S139I P149H",2
"lib2","SARS-CoV-2","GTAATAGAAGGGCCCT",7,127.62,10.13,-0.71,0.04,2.71,1.08,0,">1 nonsynonymous","A14H S43W",2
"lib2","SARS-CoV-2","GTAATAGACTGTACTT",7,149.34,10.2,-0.64,0.06,2.6,1.03,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","GTAATAGCCTAGCTAA",1,9.21,8.39,-2.44,0.57,1.5,1.06,0.07,">1 nonsynonymous","N13I C49R D75P",3
"lib2","SARS-CoV-2","GTAATAGCTACACATC",1,14.88,10.36,-0.48,0.1,2.87,1.02,0.01,">1 nonsynonymous","C31D F160Y",2
"lib2","SARS-CoV-2","GTAATAGTAATTTTTT",5,51.93,10.89,0.05,0.05,2.93,1.07,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","GTAATAGTTCCAATAC",27,289.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5K Y39I R73V D98E Y119E",5
"lib2","SARS-CoV-2","GTAATAGTTTTAATAA",1,22.28,10.76,-0.08,0.09,2.89,1.04,0,">1 nonsynonymous","D98T S147T",2
"lib2","SARS-CoV-2","GTAATATACCAGATAG",6,105.22,10.73,-0.1,0.05,2.92,1.09,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","GTAATATATTATTAAA",2,14.46,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L5D F8C V77L T100P",4
"lib2","SARS-CoV-2","GTAATATCAAAGTAAT",12,67.98,10.15,-0.68,0.03,2.86,1.06,0,">1 nonsynonymous","N40W D59G Q168S",3
"lib2","SARS-CoV-2","GTAATATCTAATCTAA",3,46.22,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","Y35S P96R S139L G146N N151S",5
"lib2","SARS-CoV-2","GTAATATGAAATAAGT",4,42.82,9.76,-1.08,0.08,1.91,1.04,0,">1 nonsynonymous","G9K S41E S113A P133V T201S",5
"lib2","SARS-CoV-2","GTAATATGAACGTAAG",4,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K L95M I104S",3
"lib2","SARS-CoV-2","GTAATATGACAGTAAA",9,220.21,10.16,-0.68,0.07,2.52,1.04,0,">1 nonsynonymous","T100M W106K",2
"lib2","SARS-CoV-2","GTAATATGATTCCTGC",9,55.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58S V77G L162G",3
"lib2","SARS-CoV-2","GTAATATGTCCTTTGC",1,16.05,6,-4.84,1.75,1.5,1.15,0.01,">1 nonsynonymous","Y123A F167L G172T",3
"lib2","SARS-CoV-2","GTAATATTAACCATTT",1,13.88,10.8,-0.03,0.07,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAATATTAATGATAG",2,27.07,10.73,-0.1,0.04,3,1.04,0,">1 nonsynonymous","S41L K56E",2
"lib2","SARS-CoV-2","GTAATATTTATGGCCG",3,19.52,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","I72R Y119R",2
"lib2","SARS-CoV-2","GTAATATTTCTTTAAA",5,46.67,9.78,-1.06,0.1,2.33,1.01,0,">1 nonsynonymous","N24V S45Y G152D",3
"lib2","SARS-CoV-2","GTAATATTTGAGACAA",5,43.19,8.46,-2.38,0.08,1.81,1.07,0,">1 nonsynonymous","Y35S S45P A145T Q168R",4
"lib2","SARS-CoV-2","GTAATCAAAAACATCT",5,8.65,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49D S147R L183P",3
"lib2","SARS-CoV-2","GTAATCAAAAATTGCC",7,169.86,10.65,-0.18,0.04,2.93,1.04,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","GTAATCAAAATTGACG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16A G86I K94H P161V",4
"lib2","SARS-CoV-2","GTAATCAAATCAAAAA",4,70.87,10.65,-0.18,0.03,2.86,1.15,0,"1 nonsynonymous","T15Q",1
"lib2","SARS-CoV-2","GTAATCAACTCGTTGT",2,22.5,8.78,-2.06,0.13,1.99,1.11,0.01,">1 nonsynonymous","K87F P133Y T148Q G174H",4
"lib2","SARS-CoV-2","GTAATCAAGCATGCGC",6,41.8,6.42,-4.41,0.5,1.5,1.15,0.02,">1 nonsynonymous","D90C G101Y",2
"lib2","SARS-CoV-2","GTAATCACCCCAGGAT",4,47.87,8.33,-2.5,0.1,2.39,1.1,0,">1 nonsynonymous","E141N S147D Y165Q",3
"lib2","SARS-CoV-2","GTAATCACGTAAGGAT",8,88.81,9.3,-1.54,0.06,2.01,1.07,0,">1 nonsynonymous","G9T Y91T T148K",3
"lib2","SARS-CoV-2","GTAATCAGATTAAATG",7,43.44,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","R27L C49R P82G Q163M",4
"lib2","SARS-CoV-2","GTAATCAGGACGTAGA",2,22.01,10.05,-0.78,0.08,2.89,1.14,0,">1 nonsynonymous","K87G P149Q",2
"lib2","SARS-CoV-2","GTAATCATCCTCTACA",1,7.7,10.62,-0.22,0.08,3,1,0,">1 nonsynonymous","N30K T201K",2
"lib2","SARS-CoV-2","GTAATCATTGCCACCT",1,24.71,8.65,-2.18,0.12,2.36,1.08,0,"1 nonsynonymous","N107L",1
"lib2","SARS-CoV-2","GTAATCCCAAAAGTCA",4,25.81,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D59S R179F",2
"lib2","SARS-CoV-2","GTAATCCCATAAAGAC",1,17.87,10.3,-0.54,0.1,2.68,1,0.01,"1 nonsynonymous","E76S",1
"lib2","SARS-CoV-2","GTAATCCCCCACTTTT",5,102.14,9.21,-1.62,0.09,1.65,1.1,0,">1 nonsynonymous","L38T A89S",2
"lib2","SARS-CoV-2","GTAATCCGGGCCATTG",2,5.58,6,-4.84,2,1.5,1,0,">1 nonsynonymous","F17E Y66E A89L V103A",4
"lib2","SARS-CoV-2","GTAATCCGTACACGTA",10,207.88,8.28,-2.55,0.1,2.62,1.07,0,">1 nonsynonymous","F99L L125E S200R",3
"lib2","SARS-CoV-2","GTAATCCGTACAGCAG",3,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F P82I I104G S200D",4
"lib2","SARS-CoV-2","GTAATCCGTTCATACA",4,24.35,6.3,-4.53,1.15,1.5,1.14,0.07,">1 nonsynonymous","Y35N C49P G83S Y123L",4
"lib2","SARS-CoV-2","GTAATCCTAAAGATTG",7,4.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Y K48S Y123D E135L",4
"lib2","SARS-CoV-2","GTAATCCTTCTGAAAT",17,125.59,9.63,-1.21,0.05,1.86,1.02,0,">1 nonsynonymous","T3L S36K L60M A105C",4
"lib2","SARS-CoV-2","GTAATCGAAACTATCC",1,10.99,11,0.16,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAATCGAAATGGGAC",10,34.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E G9R G51K G101H",4
"lib2","SARS-CoV-2","GTAATCGCTAAGAACG",2,5.48,6,-4.84,2,1.5,1.09,0.06,">1 nonsynonymous","C102F N118L",2
"lib2","SARS-CoV-2","GTAATCTATAGATCCT",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101V S139V G174Y",3
"lib2","SARS-CoV-2","GTAATCTATGTACAAT",2,51.64,10.43,-0.41,0.07,2.85,1.04,0,">1 nonsynonymous","T3F K87L",2
"lib2","SARS-CoV-2","GTAATCTCGTATATAA",2,53.29,9.74,-1.1,0.06,2.87,1.09,0,">1 nonsynonymous","L57M Q168T",2
"lib2","SARS-CoV-2","GTAATGAAATGATCCC",4,16.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51Y G83T",2
"lib2","SARS-CoV-2","GTAATGAACCCACTAC",6,25.8,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12Y A81N L95T S113Y",4
"lib2","SARS-CoV-2","GTAATGAATTACCATA",17,78.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R T15Y S139N",3
"lib2","SARS-CoV-2","GTAATGACAATAATCA",2,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V P82F C150K",3
"lib2","SARS-CoV-2","GTAATGACCACCAAAT",4,118.07,10.8,-0.03,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAATGACGTTACAAA",5,25.74,6,-4.84,0.87,1.5,1.12,0.01,">1 nonsynonymous","C6S N110W N157Y L162A",4
"lib2","SARS-CoV-2","GTAATGAGAGGATCGG",4,71.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K128I P149N Y159T",3
"lib2","SARS-CoV-2","GTAATGAGCGATTTAG",3,95.07,10.88,0.04,0.06,2.83,1.19,0,">1 nonsynonymous","N120K P197K",2
"lib2","SARS-CoV-2","GTAATGAGGAAAGGCA",18,296.86,10.71,-0.12,0.04,2.9,1.08,0,">1 nonsynonymous","E10D N58S",2
"lib2","SARS-CoV-2","GTAATGAGGTCTAACA",4,37.03,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S43L W106R N118T T148P",4
"lib2","SARS-CoV-2","GTAATGAGGTGATTTA",3,8.11,10.6,-0.23,0.26,2.83,1,0.02,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","GTAATGATTTCAAACA",9,125.54,9.8,-1.04,0.06,2.31,1.04,0,">1 nonsynonymous","F62S D90T V173H",3
"lib2","SARS-CoV-2","GTAATGCAAATGCACA",3,50.94,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4Y T55D V77S G86R D98I F167A",6
"lib2","SARS-CoV-2","GTAATGCAACTAATTT",9,81.37,9.99,-0.85,0.07,2.1,1.06,0,">1 nonsynonymous","F44Y Y91R N151R",3
"lib2","SARS-CoV-2","GTAATGCACAACAGTC",12,4.53,NA,NA,NA,NA,NA,NA,"stop","S45* S53F L60E T170I",4
"lib2","SARS-CoV-2","GTAATGCAGCATAGCA",10,91.46,10.68,-0.16,0.04,2.97,1.06,0,">1 nonsynonymous","N120L S129Q",2
"lib2","SARS-CoV-2","GTAATGCCATTGAGAA",3,27.08,10.76,-0.07,0.03,3,1.02,0,"1 nonsynonymous","S184A",1
"lib2","SARS-CoV-2","GTAATGCCGTATGGGC",1,71.89,8.7,-2.14,0.1,3,1.05,0,"1 nonsynonymous","N157L",1
"lib2","SARS-CoV-2","GTAATGCGCGTTGATA",6,89.97,9.69,-1.15,0.13,2.05,1.07,0,">1 nonsynonymous","L5C E10W G51N S129V Y143F",5
"lib2","SARS-CoV-2","GTAATGCGTACTTCGC",5,115.71,10.78,-0.05,0.05,2.96,1.05,0,"1 nonsynonymous","N120D",1
"lib2","SARS-CoV-2","GTAATGCTAAAAACAA",1,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N130Y",1
"lib2","SARS-CoV-2","GTAATGCTTAGCTAAG",3,17.29,9.77,-1.07,0.2,2.16,1.03,0.02,">1 nonsynonymous","Y35E D90R",2
"lib2","SARS-CoV-2","GTAATGCTTTAAGACA",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","GTAATGCTTTACAGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","T100* W106* K114D",3
"lib2","SARS-CoV-2","GTAATGGAGACAAAAT",8,127.97,10.56,-0.27,0.06,2.82,1.08,0,">1 nonsynonymous","T15R S129G",2
"lib2","SARS-CoV-2","GTAATGGAGCATCAGG",6,0.76,NA,NA,NA,NA,NA,NA,"stop","E10G V20S Y35N S41L K56N D97R N107T N157*",8
"lib2","SARS-CoV-2","GTAATGGCATCCTCTT",5,45.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I88L Y159G",2
"lib2","SARS-CoV-2","GTAATGGCGTGCGCTC",1,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M V52I W106C Y165D",4
"lib2","SARS-CoV-2","GTAATGGGCAAACGAC",7,80.23,10.59,-0.25,0.03,2.95,1.05,0,">1 nonsynonymous","T3S I28V T140Q",3
"lib2","SARS-CoV-2","GTAATGGGGGCATCCA",14,5.98,NA,NA,NA,NA,NA,NA,"stop","Y91V V103M N120* P149* Q168P P177S",6
"lib2","SARS-CoV-2","GTAATGGTTGATAAGA",9,81.47,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33H N109M Y143K F160T",4
"lib2","SARS-CoV-2","GTAATGTAAGCCTCTG",3,34.55,10.03,-0.8,0.11,2.18,1.05,0.01,">1 nonsynonymous","T63L S139L",2
"lib2","SARS-CoV-2","GTAATGTATCAGTTAT",7,145.54,10.4,-0.43,0.02,2.95,1.05,0,">1 nonsynonymous","N120V S129L",2
"lib2","SARS-CoV-2","GTAATGTATGCTCTGC",8,40.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F99R D137Q",2
"lib2","SARS-CoV-2","GTAATGTCTCATTCCC",3,31.03,10.72,-0.12,0.05,2.97,1.04,0,">1 nonsynonymous","D97T S147I",2
"lib2","SARS-CoV-2","GTAATGTTTCTCTCAT",2,12.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P V103N N118H",3
"lib2","SARS-CoV-2","GTAATTAAAAATCAAT",3,23.66,6.43,-4.41,0.94,1.5,1.24,0.06,">1 nonsynonymous","I2Y G74Q A89S P96C Y178N",5
"lib2","SARS-CoV-2","GTAATTAAATATTCAA",8,67.57,6,-4.84,0.79,1.5,1.12,0,">1 nonsynonymous","K87Y R179N T201A",3
"lib2","SARS-CoV-2","GTAATTAAGAATTTGT",2,38.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V32Q D68R S113R",3
"lib2","SARS-CoV-2","GTAATTACTAATCAGT",2,9.25,10.15,-0.68,0.18,2.18,1.04,0.01,">1 nonsynonymous","F47N T55A",2
"lib2","SARS-CoV-2","GTAATTAGATCAGTAA",3,11.21,10.63,-0.2,0.15,2.75,1,0.01,">1 nonsynonymous","G9Y K94H C195T",3
"lib2","SARS-CoV-2","GTAATTAGTGAAACCA",7,103.88,9.85,-0.98,0.05,2.2,1.03,0,">1 nonsynonymous","K26A Y66D S147L",3
"lib2","SARS-CoV-2","GTAATTATAAATAGCT",8,69.67,6.39,-4.45,0.34,1.5,1.12,0.01,">1 nonsynonymous","G9Q L60K R179V",3
"lib2","SARS-CoV-2","GTAATTATAGATCATG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L N157F",2
"lib2","SARS-CoV-2","GTAATTCAAATCTGAG",8,70.23,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N64H G86S I104W N120L L131A",5
"lib2","SARS-CoV-2","GTAATTCAATACATTA",6,3.11,NA,NA,NA,NA,NA,NA,"stop","V77* Q84L R127H",3
"lib2","SARS-CoV-2","GTAATTCAGCAAGCTA",9,3.52,NA,NA,NA,NA,NA,NA,"stop","N13Q V153*",2
"lib2","SARS-CoV-2","GTAATTCATACGCGAA",1,5.32,10.31,-0.53,0.15,2.7,1.38,0.01,">1 nonsynonymous","L38I C61A",2
"lib2","SARS-CoV-2","GTAATTCATATAGCCT",3,1.81,NA,NA,NA,NA,NA,NA,"stop","A22* V103R C150* S164L",4
"lib2","SARS-CoV-2","GTAATTCATCATGACA",9,367.1,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","Q163P Q176V",2
"lib2","SARS-CoV-2","GTAATTCATTCACCTT",5,93.09,9.57,-1.27,0.09,1.98,1.06,0,">1 nonsynonymous","D90E A105M",2
"lib2","SARS-CoV-2","GTAATTCCAATAAATG",6,2.09,NA,NA,NA,NA,NA,NA,"stop","P54S G146*",2
"lib2","SARS-CoV-2","GTAATTCCCAATACCC",5,37.97,10.75,-0.09,0.05,3,1.04,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","GTAATTCCTATAACAT",18,103.66,9.33,-1.5,0.05,2.14,1.08,0,">1 nonsynonymous","D34V A145I",2
"lib2","SARS-CoV-2","GTAATTCTAGTTTAAT",4,0.43,NA,NA,NA,NA,NA,NA,"stop","C49R A67* K87* S113F Y165G",5
"lib2","SARS-CoV-2","GTAATTCTCCGAGACA",6,1,NA,NA,NA,NA,NA,NA,"stop","A18T A42*",2
"lib2","SARS-CoV-2","GTAATTCTTGTCGAGT",3,11.54,6.82,-4.01,0.48,1.5,1.07,0.07,">1 nonsynonymous","N4Q V103K G146E T201R",4
"lib2","SARS-CoV-2","GTAATTGAGAGAAAGG",6,45.7,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","C6S C102M Y119L Q176S",4
"lib2","SARS-CoV-2","GTAATTGAGCGACCGC",2,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64I P96F E154G",3
"lib2","SARS-CoV-2","GTAATTGATCCGTTTA",2,40.92,10.78,-0.05,0.07,2.83,1.18,0,"1 nonsynonymous","L187V",1
"lib2","SARS-CoV-2","GTAATTGCCAGATAGG",8,45.63,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R16I I104N I142Y N151V",4
"lib2","SARS-CoV-2","GTAATTGCGCATGCCA",16,67.47,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C49L G146A S184M P191R",4
"lib2","SARS-CoV-2","GTAATTGCTAATCTAC",9,103.56,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C102L G172M",2
"lib2","SARS-CoV-2","GTAATTGTGCACTACC",6,49.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K87F R124I",2
"lib2","SARS-CoV-2","GTAATTTAAAGTTACT",1,20.74,7.62,-3.21,0.36,1.5,1.28,0.03,">1 nonsynonymous","V11N Y35F A105Y S129V",4
"lib2","SARS-CoV-2","GTAATTTAAAGTTATA",4,36.52,9.95,-0.88,0.14,2.22,1.1,0.01,"1 nonsynonymous","N13V",1
"lib2","SARS-CoV-2","GTAATTTACGTCATCT",6,7.39,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A105S K128L L183N K199L",4
"lib2","SARS-CoV-2","GTAATTTATCCAAGTA",2,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H Y91L P96T",3
"lib2","SARS-CoV-2","GTAATTTATGAGTTTA",3,2.81,NA,NA,NA,NA,NA,NA,"stop","I2* K26W R73S G83V V115*",5
"lib2","SARS-CoV-2","GTAATTTATTCACACG",7,0.6,NA,NA,NA,NA,NA,NA,"stop","T63K S69* P169N",3
"lib2","SARS-CoV-2","GTAATTTATTTCAGAA",6,16.22,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","D59H Y91H Y143N G152N N171I",5
"lib2","SARS-CoV-2","GTAATTTATTTGAACA",2,30.35,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","V181K",1
"lib2","SARS-CoV-2","GTAATTTCTTTTGAAA",7,129.42,10.63,-0.21,0.02,2.96,1.05,0,">1 nonsynonymous","K56S N120I",2
"lib2","SARS-CoV-2","GTAATTTTAACATAAG",3,26.12,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","D59I F70Y T148R",3
"lib2","SARS-CoV-2","GTAATTTTGGTAACTT",9,131.19,8.91,-1.93,0.14,1.5,1.04,0.01,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","GTAATTTTTGTGCGTT",4,55.88,10.89,0.05,0.1,2.87,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAAAAACGTCAAA",2,13.91,8.76,-2.08,0.3,2.28,1.01,0.03,"1 nonsynonymous","N157P",1
"lib2","SARS-CoV-2","GTACAAAAATCTAAGT",3,22.63,10.14,-0.69,0.18,2.32,1.06,0.01,">1 nonsynonymous","V77L Y91R",2
"lib2","SARS-CoV-2","GTACAAAATACTAAAC",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11L T63V Q84C Y93M I104V",5
"lib2","SARS-CoV-2","GTACAAACATGGCGGA",14,340.07,10.85,0.01,0.05,2.91,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAAACTGCCCACT",4,105.41,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","P54W G86N P177R S184T",4
"lib2","SARS-CoV-2","GTACAAAGCACTGTTT",5,141.48,8.66,-2.18,0.09,2.46,1.07,0,"1 nonsynonymous","Y165Q",1
"lib2","SARS-CoV-2","GTACAAAGGACTTAGG",10,58.66,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","L57W D98N S129I Y143E L183S",5
"lib2","SARS-CoV-2","GTACAAAGGATATAGA",10,162.93,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","I88N N110I",2
"lib2","SARS-CoV-2","GTACAAAGGCATATGA",5,3.71,NA,NA,NA,NA,NA,NA,"stop","L57R K87A L95W A105* T148F",5
"lib2","SARS-CoV-2","GTACAAAGTCCATATG",10,113.54,10.86,0.02,0.05,2.94,1.08,0,">1 nonsynonymous","I2L P7N",2
"lib2","SARS-CoV-2","GTACAAATAACAAAAC",4,11.33,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y50N N107Q P149H T170V",4
"lib2","SARS-CoV-2","GTACAAATACGAGTAA",7,34.77,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y93G A145T",2
"lib2","SARS-CoV-2","GTACAAATATGGTAAA",11,192.98,10.81,-0.02,0.06,2.84,1.17,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","GTACAAATTATGGCGG",2,7.11,10.25,-0.58,0.06,2.95,1,0,">1 nonsynonymous","N24Q T63L L95M",3
"lib2","SARS-CoV-2","GTACAAATTGGGTTAG",4,51.78,9.93,-0.91,0.08,2.71,1.03,0,">1 nonsynonymous","P7V F62T Q163N",3
"lib2","SARS-CoV-2","GTACAACAATCCGCAT",6,31.18,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y35L D98K V103G T201V",4
"lib2","SARS-CoV-2","GTACAACACTTCCATG",7,3.7,NA,NA,NA,NA,NA,NA,"stop","A14R R73* A81P A145F G155A",5
"lib2","SARS-CoV-2","GTACAACAGAATGTAT",2,48,6.05,-4.78,1.14,1.5,1.17,0.02,">1 nonsynonymous","A14F Q176R",2
"lib2","SARS-CoV-2","GTACAACAGCACCAGA",7,0.21,NA,NA,NA,NA,NA,NA,"stop","S43A A89F D112V E141* V181F",5
"lib2","SARS-CoV-2","GTACAACATGGCAATG",9,3.09,NA,NA,NA,NA,NA,NA,"stop","A42* V52T G166L",3
"lib2","SARS-CoV-2","GTACAACCACCTATCT",4,34.09,9.82,-1.02,0.12,2.48,1,0.01,">1 nonsynonymous","L57G G116K",2
"lib2","SARS-CoV-2","GTACAACCCCCAGGAT",2,2.03,NA,NA,NA,NA,NA,NA,"stop","V52I A89K S113T R127* E135R",5
"lib2","SARS-CoV-2","GTACAACCTATCAACC",4,95.04,9.95,-0.89,0.05,2.47,1,0,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","GTACAACGGCGTTATA",6,33.78,10.89,0.05,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAACGGCTCTAAA",24,310.37,7.89,-2.94,0.12,1.78,1.08,0.01,">1 nonsynonymous","T55S Y91T F156T G166S",4
"lib2","SARS-CoV-2","GTACAACTCACACCAT",6,35.4,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","S43L Y50T C61F D68V G83L C102S S113L A190V",8
"lib2","SARS-CoV-2","GTACAACTTAAGAATC",7,22.92,9.75,-1.09,0.16,2.47,1.21,0.01,">1 nonsynonymous","N13H G155N",2
"lib2","SARS-CoV-2","GTACAAGAAAGCCCGT",5,13.51,6.11,-4.72,0.45,3,1.13,0.01,">1 nonsynonymous","L5T V77M G172S",3
"lib2","SARS-CoV-2","GTACAAGACCCTATCC",3,33.21,10.89,0.06,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAAGACTCTCTAT",5,108.57,7.38,-3.46,0.23,1.5,1.07,0.01,">1 nonsynonymous","F44S W106Y Y119V",3
"lib2","SARS-CoV-2","GTACAAGATGTACTGC",4,112.29,10.83,0,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAAGCAACTACCT",2,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W S45N Y119T",3
"lib2","SARS-CoV-2","GTACAAGCCAATGCGG",8,69.24,10.35,-0.48,0.04,2.82,1.07,0,">1 nonsynonymous","D90F T100R",2
"lib2","SARS-CoV-2","GTACAAGGAAACAAGT",2,85.52,10.27,-0.57,0.06,2.79,1.09,0,"1 nonsynonymous","S45F",1
"lib2","SARS-CoV-2","GTACAAGGGAGAATTT",3,4.22,NA,NA,NA,NA,NA,NA,"stop","S29E S53E Y159F Y175*",4
"lib2","SARS-CoV-2","GTACAATAAAAATCAT",4,131.4,10.84,0,0.03,2.89,1.09,0,">1 nonsynonymous","T15K F160R",2
"lib2","SARS-CoV-2","GTACAATAACGTCGAA",1,37.08,10.85,0.02,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACAATAATTAACCG",1,27.36,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N30I I80Y",2
"lib2","SARS-CoV-2","GTACAATAGGCAGTGA",1,45.37,10.25,-0.58,0.08,2.86,1,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","GTACAATATGCCTTCG",3,123.14,10.94,0.1,0.05,2.91,1.11,0,">1 nonsynonymous","T100L L122M Q144M S164R",4
"lib2","SARS-CoV-2","GTACAATCAAAACAAC",6,26.68,10.89,0.05,0.1,2.93,1.1,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","GTACAATCAGTAAAAG",4,19.18,10.48,-0.35,0.11,2.89,1.12,0,">1 nonsynonymous","G9A N64S K132R Q163N",4
"lib2","SARS-CoV-2","GTACAATCCATGATTT",2,5.84,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","P7T V103W",2
"lib2","SARS-CoV-2","GTACAATGACCAAATA",2,16.38,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G51Y F134L F185W",3
"lib2","SARS-CoV-2","GTACAATGAGTCACCT",3,51.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N157R R179W",2
"lib2","SARS-CoV-2","GTACAATGCGCCCTCA",5,30.76,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","S19L C31K I104T P149E",4
"lib2","SARS-CoV-2","GTACAATGTGAGGGTC",4,88.48,10.71,-0.13,0.04,2.94,1.06,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","GTACAATTAACGTACG",1,25.72,10.8,-0.04,0.06,2.95,1.04,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","GTACAATTTGTTGGAA",2,7.54,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5I P96L I104L C158Y",4
"lib2","SARS-CoV-2","GTACACAAATACAATA",5,35.48,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","G9I G86K L122R",3
"lib2","SARS-CoV-2","GTACACAACTCTCTGG",2,14.65,9.15,-1.69,0.19,1.72,1,0.02,">1 nonsynonymous","L5R V11W A105M V173A",4
"lib2","SARS-CoV-2","GTACACATACAGACAC",1,33.53,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y35W P96L G117V G155V",4
"lib2","SARS-CoV-2","GTACACATAGCAACCT",9,143.29,10.22,-0.62,0.06,2.85,1,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","GTACACATATATTAAG",9,158.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K56I G172Y",2
"lib2","SARS-CoV-2","GTACACATGAAAATGG",3,8.43,6,-4.84,2,3,1.13,0.02,">1 nonsynonymous","L5E V52E I104T R127L",4
"lib2","SARS-CoV-2","GTACACATTCAAATAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L I104D",2
"lib2","SARS-CoV-2","GTACACCAGGCACTAG",6,44.79,8.26,-2.58,0.22,1.5,1.02,0.02,">1 nonsynonymous","F99L A145S N151I",3
"lib2","SARS-CoV-2","GTACACCAGTTAGTAC",6,23.87,6.86,-3.98,0.55,1.5,1.12,0.07,">1 nonsynonymous","T15L I88F P96L Q168K Q176P K198N",6
"lib2","SARS-CoV-2","GTACACCCAAAAAGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","T3A Y39* G152F F185V",4
"lib2","SARS-CoV-2","GTACACCGTTTTCGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T G116W Q163S",3
"lib2","SARS-CoV-2","GTACACCTACACTGAA",5,61.98,6,-4.84,1.36,3,1.27,0,">1 nonsynonymous","L57G S113L",2
"lib2","SARS-CoV-2","GTACACCTATATTTGA",6,123.78,10.01,-0.83,0.07,2.26,1.02,0,">1 nonsynonymous","P7N K94S S184Q",3
"lib2","SARS-CoV-2","GTACACCTGAGACAAA",3,41.22,9.07,-1.76,0.11,2.69,1.03,0,">1 nonsynonymous","S41D N107H",2
"lib2","SARS-CoV-2","GTACACCTTTCGCCTG",1,24.11,10.7,-0.13,0.07,2.92,1.1,0,">1 nonsynonymous","T3Y Q84S P149S",3
"lib2","SARS-CoV-2","GTACACGACAAGACAC",3,50.51,10.86,0.03,0.09,2.93,1.05,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","GTACACGATGGTAGAC",10,11.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G S19L A145R",3
"lib2","SARS-CoV-2","GTACACGATGTGATAT",2,5.91,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D68G Q84M S139N P177A T201P",5
"lib2","SARS-CoV-2","GTACACGATTATATGT",2,24.7,6.26,-4.57,0.99,1.5,1.17,0.05,">1 nonsynonymous","S19T Y91V",2
"lib2","SARS-CoV-2","GTACACGCACAATCGT",3,34.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20W T63L P82L L122R Q144Y",5
"lib2","SARS-CoV-2","GTACACGCAGAGATTA",7,52.41,10.14,-0.7,0.05,2.72,1.05,0,"1 nonsynonymous","E135F",1
"lib2","SARS-CoV-2","GTACACGGCGATATAA",4,45.9,10.63,-0.21,0.07,2.87,1.11,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","GTACACGTAGAAATCT",4,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105F N157H",2
"lib2","SARS-CoV-2","GTACACTAAAGGACTA",3,47.2,9.81,-1.03,0.08,2.5,1.03,0,">1 nonsynonymous","Y39S F99L S184V",3
"lib2","SARS-CoV-2","GTACACTAAGCCTCGG",13,13.4,NA,NA,NA,NA,NA,NA,"stop","S113*",1
"lib2","SARS-CoV-2","GTACACTAGGGACGAG",1,16.13,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","C6L D34V S108Y K199N",4
"lib2","SARS-CoV-2","GTACACTCATCTAGGT",4,3.29,NA,NA,NA,NA,NA,NA,"stop","T148*",1
"lib2","SARS-CoV-2","GTACACTCCCTGTTTT",3,54.37,8.83,-2,0.12,2.17,1.07,0.01,">1 nonsynonymous","C61G P96T Y175H",3
"lib2","SARS-CoV-2","GTACACTTAACCTGCT",11,46.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C49Q Y119T",2
"lib2","SARS-CoV-2","GTACACTTACGGCCCC",15,243.12,10.86,0.02,0.05,2.92,1.08,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","GTACAGAAAAGCCTTA",1,8.22,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E76G T100S D137N K198N",4
"lib2","SARS-CoV-2","GTACAGAAAGCTAGCA",6,22.3,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S45D G74K K87R D97P E135L P149T P161Y V182S",8
"lib2","SARS-CoV-2","GTACAGAACGCGATAT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Q C49W V103R N107R L125S",5
"lib2","SARS-CoV-2","GTACAGAAGTGAACTA",10,53.9,7.91,-2.93,0.24,1.51,1.15,0.02,">1 nonsynonymous","A89S N107L",2
"lib2","SARS-CoV-2","GTACAGACAATCTACA",5,25.73,8.04,-2.8,0.32,1.5,1,0.05,">1 nonsynonymous","L38Y C102L",2
"lib2","SARS-CoV-2","GTACAGACACCATCTA",4,22.85,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","C6D C49K F99D N120L Y165R",5
"lib2","SARS-CoV-2","GTACAGACATTACACA",11,102.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94I Y143Q L162R K198P",4
"lib2","SARS-CoV-2","GTACAGATAATTTTAA",1,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","GTACAGATAGCGCCCC",1,6.13,10.64,-0.2,0.11,2.99,1.07,0,"1 nonsynonymous","L38V",1
"lib2","SARS-CoV-2","GTACAGATATACTGAC",15,108.22,8.32,-2.51,0.14,1.78,1.12,0.01,">1 nonsynonymous","N4Q F126P",2
"lib2","SARS-CoV-2","GTACAGATGCCTCTAG",2,0.44,NA,NA,NA,NA,NA,NA,"stop","R73L P82W G86E S113* Y119*",5
"lib2","SARS-CoV-2","GTACAGATGTAGCTAT",13,99.9,6.18,-4.66,0.38,1.5,1.14,0.01,">1 nonsynonymous","N40R C150L",2
"lib2","SARS-CoV-2","GTACAGCAATATCGGA",5,14.1,6.27,-4.56,0.58,3,1.15,0.02,">1 nonsynonymous","A14L T46D F99L Y159K",4
"lib2","SARS-CoV-2","GTACAGCCTGAAACAA",5,126.1,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N107I R136F",2
"lib2","SARS-CoV-2","GTACAGCTAAAGTGGC",5,76.03,10.47,-0.37,0.05,2.87,1.06,0,">1 nonsynonymous","A33M S45M",2
"lib2","SARS-CoV-2","GTACAGCTGCTGATCC",5,16.81,6.06,-4.77,1.56,1.5,1.25,0.04,">1 nonsynonymous","G83I D90H N130A S184L",4
"lib2","SARS-CoV-2","GTACAGGAACTTAACA",11,93.68,6.06,-4.77,0.68,1.5,1.18,0.01,">1 nonsynonymous","F12T L57W P161E",3
"lib2","SARS-CoV-2","GTACAGGACGATCCAC",2,67.54,9.95,-0.89,0.05,2.86,1.13,0,">1 nonsynonymous","N4A N118S",2
"lib2","SARS-CoV-2","GTACAGGACGCAATTT",4,67.72,10.37,-0.47,0.06,2.82,1.06,0,"1 nonsynonymous","K26W",1
"lib2","SARS-CoV-2","GTACAGGATAGCGACA",1,16.09,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T46A R179P",2
"lib2","SARS-CoV-2","GTACAGGCTTTTCGAG",4,18.93,9.58,-1.26,0.13,2.48,1,0.01,">1 nonsynonymous","A14V F44D A105T P197S",4
"lib2","SARS-CoV-2","GTACAGTAAATAGAGA",2,17.93,6.16,-4.67,0.72,1.5,1.09,0.02,">1 nonsynonymous","C6E S41L T46F T55P N64L F70M N171Y",7
"lib2","SARS-CoV-2","GTACAGTAATGTACGG",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L A42D",2
"lib2","SARS-CoV-2","GTACAGTATTCGACGC",5,51.38,7.72,-3.11,0.23,1.5,1.06,0.02,">1 nonsynonymous","Y35V L95C G174W",3
"lib2","SARS-CoV-2","GTACAGTTTAACTATA",1,36.14,10.05,-0.79,0.09,2.53,1.03,0,">1 nonsynonymous","N40F V77L L111I G152T",4
"lib2","SARS-CoV-2","GTACATAAAACCTTAG",3,30.19,10.29,-0.55,0.07,2.84,1.1,0,">1 nonsynonymous","G9L A18S L188F",3
"lib2","SARS-CoV-2","GTACATAAGTATATTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M Y91K C102Y G117V T201I",5
"lib2","SARS-CoV-2","GTACATAATTTTACAA",2,73.31,10.74,-0.09,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACATACTATGTAAA",7,60.57,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y50I A67T A81S K94P F185N",5
"lib2","SARS-CoV-2","GTACATACTTCACAGC",4,5.05,6.59,-4.24,2,3,1.13,0.02,">1 nonsynonymous","T55C P133C G155F L188S",4
"lib2","SARS-CoV-2","GTACATAGACAGCCAG",10,180.17,10.6,-0.24,0.03,2.96,1.05,0,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","GTACATAGGTTTTACC",1,91.51,10.09,-0.74,0.06,2.75,1.03,0,">1 nonsynonymous","G83S K94A",2
"lib2","SARS-CoV-2","GTACATATATATACCA",7,104.06,10.21,-0.63,0.06,2.7,1.08,0,">1 nonsynonymous","Y39E D59V P149L K198D",4
"lib2","SARS-CoV-2","GTACATATATGGAATC",3,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S L95A G166V G172K",4
"lib2","SARS-CoV-2","GTACATATATTAAATA",1,69.84,7.85,-2.99,0.11,2.46,1.06,0,"1 nonsynonymous","C158R",1
"lib2","SARS-CoV-2","GTACATATGACGCATG",4,93.88,9.48,-1.36,0.1,2.5,1.06,0,">1 nonsynonymous","N4S S41L G155V",3
"lib2","SARS-CoV-2","GTACATATGATAAACA",2,54.74,10.8,-0.04,0.04,2.95,1.06,0,">1 nonsynonymous","I2T T55A L188Y",3
"lib2","SARS-CoV-2","GTACATCATACTCAGG",3,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80L G117W V182S",3
"lib2","SARS-CoV-2","GTACATCATATGCTTA",1,24.76,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTACATCCAAAAACGA",13,44.56,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F17K L95H",2
"lib2","SARS-CoV-2","GTACATCGCCGTTTCA",4,65.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3S W23E S45H A81V R127P I138C",6
"lib2","SARS-CoV-2","GTACATCTAAAACACT",4,131.45,7.99,-2.85,0.2,1.5,1.07,0.01,">1 nonsynonymous","N58M Y119T Q176K K199W",4
"lib2","SARS-CoV-2","GTACATCTTGTGAACT",7,3.82,NA,NA,NA,NA,NA,NA,"stop","K48R D98F F126I G152*",4
"lib2","SARS-CoV-2","GTACATCTTTCTGGGC",8,133.31,9.89,-0.94,0.05,2.72,1.01,0,">1 nonsynonymous","T46L A105M",2
"lib2","SARS-CoV-2","GTACATGAAACGGGCC",1,71.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25Y",1
"lib2","SARS-CoV-2","GTACATGATTCCACTG",1,15.28,7.98,-2.86,0.28,1.5,1.25,0.04,">1 nonsynonymous","A14V V37G A81M T148I",4
"lib2","SARS-CoV-2","GTACATGCATGCAACC",6,57.54,9.26,-1.58,0.1,1.76,1.11,0,">1 nonsynonymous","R27A S69L",2
"lib2","SARS-CoV-2","GTACATGCCATAATTT",4,229.66,10.76,-0.08,0.04,2.92,1.09,0,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","GTACATGGATGGATCT",4,17.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47T D97N P161T",3
"lib2","SARS-CoV-2","GTACATGGGGGCCAAA",6,0.61,NA,NA,NA,NA,NA,NA,"stop","K56* H189Y",2
"lib2","SARS-CoV-2","GTACATTAATCCCACG",2,24.05,10.48,-0.36,0.07,2.8,1.21,0,"1 nonsynonymous","P191L",1
"lib2","SARS-CoV-2","GTACATTAATTTACAC",12,65.24,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A14D A81T P82F F99I L131W",5
"lib2","SARS-CoV-2","GTACATTACTACGAAT",2,15.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V52S G83V D97N",3
"lib2","SARS-CoV-2","GTACATTAGAACAATC",1,20.4,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","G9F Y119S K128I P149L N157F",5
"lib2","SARS-CoV-2","GTACATTATAACATAT",1,3.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V F160H",2
"lib2","SARS-CoV-2","GTACATTCCATGAAAA",5,69.18,10.96,0.13,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACATTGCACCAGAG",10,107.54,9.04,-1.79,0.17,1.75,1.12,0.01,">1 nonsynonymous","F12I E141L G155L",3
"lib2","SARS-CoV-2","GTACATTGCGCTCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T100W G117* T170R",3
"lib2","SARS-CoV-2","GTACCAAAATACACAG",4,40.82,6.01,-4.83,1.05,1.5,1.15,0.03,">1 nonsynonymous","G51V R127V F156L",3
"lib2","SARS-CoV-2","GTACCAAACACAATAT",4,19.26,6,-4.84,1.01,2.2,1.08,0,">1 nonsynonymous","A22L A89F",2
"lib2","SARS-CoV-2","GTACCAAATGATAAAA",1,82.82,10.63,-0.2,0.05,2.95,1.04,0,"1 nonsynonymous","A33Y",1
"lib2","SARS-CoV-2","GTACCAACAATAGTAA",2,46.47,9.96,-0.88,0.13,2.33,1.04,0.01,">1 nonsynonymous","A22V N64M N110K I138L",4
"lib2","SARS-CoV-2","GTACCAACCGAGCACA",7,38.77,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","I28K K48P I80W D112E G146A P197W",6
"lib2","SARS-CoV-2","GTACCAACGAATCTCA",10,5.42,NA,NA,NA,NA,NA,NA,"stop","I72* Y119R I138H",3
"lib2","SARS-CoV-2","GTACCAAGAATAGGTT",13,54.97,6.05,-4.78,1.17,1.5,1.21,0.03,">1 nonsynonymous","S41E L57A N118M T140D G196S",5
"lib2","SARS-CoV-2","GTACCAAGTATACACA",11,96.33,7.87,-2.96,0.07,1.5,1.05,0,">1 nonsynonymous","T3M C61D N107L S200L",4
"lib2","SARS-CoV-2","GTACCAAGTTGATTCT",4,11.65,6.28,-4.56,0.55,1.5,1.1,0.01,">1 nonsynonymous","A89R T170R",2
"lib2","SARS-CoV-2","GTACCAATCTCCTGAG",5,23.19,10.28,-0.56,0.11,2.46,1.12,0.01,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","GTACCAATGGAACGCA",14,176.61,10.72,-0.12,0.05,2.93,1.08,0,">1 nonsynonymous","F8W T100H",2
"lib2","SARS-CoV-2","GTACCACAGAGACCTG",4,118.26,10.55,-0.28,0.04,2.91,1.07,0,"1 nonsynonymous","E10H",1
"lib2","SARS-CoV-2","GTACCACATATGCGGA",1,3.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F185L",1
"lib2","SARS-CoV-2","GTACCACCTCAATTGG",1,28.48,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","R25K N58Y T100D G116M P149G Y159A",6
"lib2","SARS-CoV-2","GTACCACTACTCCGAA",5,81.97,9.9,-0.94,0.06,2.69,1.05,0,">1 nonsynonymous","A14E S36M G116Q",3
"lib2","SARS-CoV-2","GTACCACTCAACAAGG",16,73.37,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R16L P96H S113K P149F",4
"lib2","SARS-CoV-2","GTACCAGACATATCAG",2,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47T F62V S139N",3
"lib2","SARS-CoV-2","GTACCAGATACCAGCA",2,29.28,9.72,-1.11,0.06,2.89,1.11,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","GTACCAGATAGCAGAC",14,258.13,10.86,0.02,0.05,2.92,1.07,0,">1 nonsynonymous","N24R G83R F160R",3
"lib2","SARS-CoV-2","GTACCAGTCAAAATCA",8,1.69,NA,NA,NA,NA,NA,NA,"stop","V37H T63M T100L Q163*",4
"lib2","SARS-CoV-2","GTACCATAGGCGTCCA",1,50.93,10.14,-0.7,0.05,2.89,1.03,0,">1 nonsynonymous","S29G T85C D97P",3
"lib2","SARS-CoV-2","GTACCATAGGCTAAAT",3,48.13,10.68,-0.15,0.03,2.94,1.06,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","GTACCATGCTCTGTAA",12,105.47,10.89,0.06,0.06,2.94,1.08,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","GTACCATTAGCAGGAT",2,25.68,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","E10N F17I D90T K114S N130W Q144Y",6
"lib2","SARS-CoV-2","GTACCCAATTTAACAT",8,7.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14V V182C",2
"lib2","SARS-CoV-2","GTACCCACTAATGGCC",1,43.11,10.36,-0.48,0.08,2.8,1.03,0,">1 nonsynonymous","N30R K48S N64T",3
"lib2","SARS-CoV-2","GTACCCAGAAAATCTA",2,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59E P82K D90I A105L",4
"lib2","SARS-CoV-2","GTACCCAGAAACAGCC",3,23.41,8.79,-2.05,0.14,2.83,1.15,0.01,">1 nonsynonymous","A42L N64V G117R",3
"lib2","SARS-CoV-2","GTACCCAGTTCACGAG",22,274.57,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S45A N107V A145L",3
"lib2","SARS-CoV-2","GTACCCATACTATACC",6,79.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","D59P V77P",2
"lib2","SARS-CoV-2","GTACCCATCAAATAAG",6,6.36,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","GTACCCATGAAACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S147*",1
"lib2","SARS-CoV-2","GTACCCCCATGCAGTT",4,20.2,NA,NA,NA,NA,NA,NA,"stop","K56M G101* K132L",3
"lib2","SARS-CoV-2","GTACCCCCCTAGGGAA",6,56.3,9.5,-1.34,0.07,1.99,1.04,0,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","GTACCCCCTTGTCAAG",3,50.39,9.73,-1.11,0.05,2.87,1.1,0,"1 nonsynonymous","P169W",1
"lib2","SARS-CoV-2","GTACCCCGCCTGCAAT",4,93.12,10.91,0.07,0.04,2.97,1.04,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GTACCCCGCTCCTATA",4,37.17,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S45P G83I A105C H189F",4
"lib2","SARS-CoV-2","GTACCCCTAACAGACA",1,0.95,NA,NA,NA,NA,NA,NA,"stop","S29L A42I Y93* N107R Y159L",5
"lib2","SARS-CoV-2","GTACCCCTGATCAAAT",3,11.8,6.24,-4.59,0.6,1.5,1.03,0.02,">1 nonsynonymous","V52E P82L I138S",3
"lib2","SARS-CoV-2","GTACCCGAGTCGGACT",2,0.19,NA,NA,NA,NA,NA,NA,"stop","C6T S45* G174R S184F",4
"lib2","SARS-CoV-2","GTACCCGCAAAACAGG",2,0.62,NA,NA,NA,NA,NA,NA,"stop","E10D V103*",2
"lib2","SARS-CoV-2","GTACCCGGCTGCTTAT",7,200.61,10.78,-0.06,0.03,2.98,1.04,0,">1 nonsynonymous","S36H Y91F",2
"lib2","SARS-CoV-2","GTACCCGTTCAATAAC",13,136.42,6.06,-4.78,0.29,1.5,1.11,0,">1 nonsynonymous","S113N V173F Q176F",3
"lib2","SARS-CoV-2","GTACCCTCCAAATAAT",5,9.55,9,-1.83,0.29,1.5,1.03,0.04,">1 nonsynonymous","F12N L122I",2
"lib2","SARS-CoV-2","GTACCCTGGTCATTAG",19,83.46,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L5V V65K K87C V103E Y121S G146I G155I",7
"lib2","SARS-CoV-2","GTACCCTGTACCTAAT",10,268.11,10.49,-0.35,0.03,2.89,1.07,0,">1 nonsynonymous","R16D D90C",2
"lib2","SARS-CoV-2","GTACCCTTGTTGCACT",6,116.45,10.88,0.04,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACCGAAAAACAAAC",1,39.24,10.93,0.09,0.09,2.92,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","GTACCGAATAATTATA",2,83.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54L G172V",2
"lib2","SARS-CoV-2","GTACCGAATGGACTAT",2,21.9,10.81,-0.03,0.06,2.92,1.07,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GTACCGACTTTTTATG",7,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K I104N S147Y L183Q",4
"lib2","SARS-CoV-2","GTACCGAGAAGATGTG",2,38.32,10.8,-0.04,0.05,2.98,1.04,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","GTACCGATCAAACAGA",4,149.78,10.75,-0.08,0.03,2.99,1.03,0,">1 nonsynonymous","N109L E141D",2
"lib2","SARS-CoV-2","GTACCGCCGCAGCGCT",8,116.26,10.65,-0.18,0.04,2.93,1.05,0,"1 nonsynonymous","T63F",1
"lib2","SARS-CoV-2","GTACCGCTGTATTAGG",3,33.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Q79R A105L Q144W C150S Q176T",5
"lib2","SARS-CoV-2","GTACCGCTGTGTCGAT",2,21.58,9.6,-1.24,0.09,1.98,1.03,0,">1 nonsynonymous","N1C V11A K56S",3
"lib2","SARS-CoV-2","GTACCGGAATGGGCCC",8,103.42,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N4L Y35K N107H T201S",4
"lib2","SARS-CoV-2","GTACCGGCATAAGCCT",4,64.58,10.66,-0.17,0.04,2.99,1.04,0,">1 nonsynonymous","I104L F160T",2
"lib2","SARS-CoV-2","GTACCGGGTTGTATGA",3,32.81,8.5,-2.33,0.27,1.5,1,0.03,">1 nonsynonymous","G9M C61V V77R P149K F160D",5
"lib2","SARS-CoV-2","GTACCGGTCGTCTTTA",1,10.89,8.85,-1.99,0.14,2.15,1.13,0.01,">1 nonsynonymous","E10Q N107T S129T",3
"lib2","SARS-CoV-2","GTACCGTCAAAGGATG",10,1.02,NA,NA,NA,NA,NA,NA,"stop","G83* D112A P197S",3
"lib2","SARS-CoV-2","GTACCGTCACCTGAAT",1,34.86,8.31,-2.52,0.13,3,1.05,0.01,">1 nonsynonymous","F126K G146D",2
"lib2","SARS-CoV-2","GTACCTAAATAATTGA",16,646.29,9.14,-1.69,0.06,2.49,1.07,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","GTACCTAAGAGACAAT",5,51.48,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","E10Y V52N T55N R78C I142R P161F",6
"lib2","SARS-CoV-2","GTACCTACATACTACC",2,58.23,8.84,-1.99,0.09,2.55,1.05,0,">1 nonsynonymous","A33Y N118S G146W E186N",4
"lib2","SARS-CoV-2","GTACCTACCCCACAGA",5,56.59,9.74,-1.1,0.08,2.45,1.02,0,">1 nonsynonymous","D112V N120D",2
"lib2","SARS-CoV-2","GTACCTACCTGTCCCG",4,45.53,8.95,-1.89,0.12,1.88,1.12,0.01,">1 nonsynonymous","A14S V37E S53I K87G F134A",5
"lib2","SARS-CoV-2","GTACCTACGTGTAAAC",18,365.22,8.42,-2.41,0.08,2.36,1.08,0,">1 nonsynonymous","S45H N130L Y143L G174R",4
"lib2","SARS-CoV-2","GTACCTACTCATTACG",14,116.73,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","GTACCTATAAAAACTG",3,135.83,8.86,-1.97,0.11,1.58,1.06,0.01,">1 nonsynonymous","A42S D90N Y178K",3
"lib2","SARS-CoV-2","GTACCTATAACCACTT",8,108.8,6,-4.84,2,1.5,1.2,0,">1 nonsynonymous","C6R S36L V77N W106L",4
"lib2","SARS-CoV-2","GTACCTATCGCTGCAA",9,163.04,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T3R S45M R127F P177G",4
"lib2","SARS-CoV-2","GTACCTATCTTTAAAT",4,0.71,NA,NA,NA,NA,NA,NA,"stop","F8H A89* S184H",3
"lib2","SARS-CoV-2","GTACCTCCCCTGCAAA",10,35.36,8.91,-1.92,0.41,1.5,1,0.06,">1 nonsynonymous","I104Y S129Y L162R G174N R179L",5
"lib2","SARS-CoV-2","GTACCTGAGGAACTTG",4,60.32,10.72,-0.12,0.05,2.94,1.07,0,">1 nonsynonymous","F62V I138K",2
"lib2","SARS-CoV-2","GTACCTGCAGATACAA",14,81.38,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G9W Q79K N118V Y123V V182E",5
"lib2","SARS-CoV-2","GTACCTTAAACCGGCA",2,19.77,9.74,-1.1,0.24,2.55,1.09,0.02,">1 nonsynonymous","E141P G174E",2
"lib2","SARS-CoV-2","GTACCTTAAAGCCCCT",11,86.28,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A22E I28R V37D D90L I142L",5
"lib2","SARS-CoV-2","GTACCTTAAATCCGCC",8,112.12,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D112P E141F Y165R",3
"lib2","SARS-CoV-2","GTACCTTAATAACAAC",10,68.52,10.89,0.06,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACCTTGATCAAGAA",13,213.69,10.69,-0.15,0.03,2.93,1.06,0,">1 nonsynonymous","T55S N64D",2
"lib2","SARS-CoV-2","GTACCTTGCCTATCCG",12,89,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9I L38Q K114L G152I",4
"lib2","SARS-CoV-2","GTACGAAAAAATAAAA",7,55.43,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R27Q D59G P96S Y123L P161I",5
"lib2","SARS-CoV-2","GTACGAAAAAATAAGA",18,87.42,6.09,-4.74,0.76,1.5,1.16,0.02,">1 nonsynonymous","T15Y F167A",2
"lib2","SARS-CoV-2","GTACGAAAACTCGCGA",5,64.9,9.29,-1.54,0.09,2.52,1.06,0,">1 nonsynonymous","Y121P T140M",2
"lib2","SARS-CoV-2","GTACGAAAAGATAAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39S Y50* V77T N107D V115P",5
"lib2","SARS-CoV-2","GTACGAAACCAAACAG",8,0.44,NA,NA,NA,NA,NA,NA,"stop","L60E R127* F156I",3
"lib2","SARS-CoV-2","GTACGAAACTACAAAG",7,101.11,8.5,-2.34,0.36,1.5,1,0.05,">1 nonsynonymous","P7L F17K K128R",3
"lib2","SARS-CoV-2","GTACGAAACTGAGGCT",12,10.48,NA,NA,NA,NA,NA,NA,"stop","T15F N107* D112R E141G",4
"lib2","SARS-CoV-2","GTACGAAAGTGTACGG",5,76.64,10.73,-0.1,0.03,2.98,1.04,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","GTACGAAATGTAACTC",3,16.88,10.58,-0.25,0.08,2.94,1.07,0,"1 nonsynonymous","L162V",1
"lib2","SARS-CoV-2","GTACGAACCTCACTGC",6,8.25,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","Q79R P96I P149L",3
"lib2","SARS-CoV-2","GTACGAACCTCCGAAT",3,16.69,10.74,-0.09,0.1,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACGAACCTCTAATT",2,37.53,9.35,-1.49,0.07,1.88,1.07,0,">1 nonsynonymous","Y39S C61F A105I",3
"lib2","SARS-CoV-2","GTACGACATCTTTGAC",3,0.44,NA,NA,NA,NA,NA,NA,"stop","T3K Q84M T140* G166P",4
"lib2","SARS-CoV-2","GTACGAGAAGGACGAC",1,10.74,NA,NA,NA,NA,NA,0.12,"wildtype","",0
"lib2","SARS-CoV-2","GTACGAGAATTTTTGG",5,32.01,9.82,-1.02,0.12,1.84,1.03,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","GTACGAGCTCATTAAC",9,1.52,NA,NA,NA,NA,NA,NA,"stop","T46G I104A F167*",3
"lib2","SARS-CoV-2","GTACGAGGCATCCTAG",2,26.87,7.79,-3.04,0.3,1.5,1.09,0.04,">1 nonsynonymous","V32L K94I N110G L111I",4
"lib2","SARS-CoV-2","GTACGAGGTAATATTC",15,267.4,10.79,-0.05,0.05,2.92,1.09,0,"1 nonsynonymous","K198C",1
"lib2","SARS-CoV-2","GTACGAGTCAAAGACC",1,0.76,NA,NA,NA,NA,NA,NA,"stop","F12D A81D S200*",3
"lib2","SARS-CoV-2","GTACGAGTGACAAAAT",1,54.17,10.83,-0.01,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACGAGTGCATACCT",3,33.11,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Y35F K87C N157R Q168C",4
"lib2","SARS-CoV-2","GTACGAGTTAAAATTA",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6A D34F L60E",3
"lib2","SARS-CoV-2","GTACGATACGACGCCA",5,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G G101D",2
"lib2","SARS-CoV-2","GTACGATATGTATGTG",1,17.59,6.02,-4.81,1.22,1.5,1.15,0.02,">1 nonsynonymous","C6V I80G L122R T148D",4
"lib2","SARS-CoV-2","GTACGATATTTGAATT",4,36.5,6.53,-4.3,0.55,1.5,1.21,0.03,">1 nonsynonymous","A14G K56T G86E S108A",4
"lib2","SARS-CoV-2","GTACGATCACCACAAA",1,46.74,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N92E F167E",2
"lib2","SARS-CoV-2","GTACGATTACCCGCAG",5,43.4,10.11,-0.73,0.14,2.62,1,0.01,"1 nonsynonymous","I142A",1
"lib2","SARS-CoV-2","GTACGATTGCAGGCTA",5,83.92,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A81G I138T C150R",3
"lib2","SARS-CoV-2","GTACGATTGGTCGAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","G9* S41L F62T N107L S129C",5
"lib2","SARS-CoV-2","GTACGCAAAGTCCGGC",3,4.48,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib2","SARS-CoV-2","GTACGCAAATAGGTAG",9,40.56,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A81D P96R Y119L I142N",4
"lib2","SARS-CoV-2","GTACGCAATTTATTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y91* N107R K114N",3
"lib2","SARS-CoV-2","GTACGCACTACAAAGC",7,39.99,9.28,-1.56,0.17,1.8,1.07,0.01,">1 nonsynonymous","T15V Y93T G174D",3
"lib2","SARS-CoV-2","GTACGCACTGAGTTGC",10,169.13,10.18,-0.66,0.05,2.58,1.02,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","GTACGCAGGTTTTGAG",5,108.8,10.82,-0.02,0.06,2.94,1.08,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","GTACGCATATATACAA",2,53.4,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V52M K94G N120T",3
"lib2","SARS-CoV-2","GTACGCCACCCCCCAC",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120W C150L",2
"lib2","SARS-CoV-2","GTACGCCCGGGCCTGT",11,240.16,10.57,-0.27,0.04,2.88,1.02,0,">1 nonsynonymous","I2N Q84H Q163L",3
"lib2","SARS-CoV-2","GTACGCCCTAAATGAT",2,7.01,6,-4.84,1.47,3,1.1,0,">1 nonsynonymous","V20L D59R L162C",3
"lib2","SARS-CoV-2","GTACGCGGACGTGGCC",6,0,NA,NA,NA,NA,NA,NA,"stop","E10D N118*",2
"lib2","SARS-CoV-2","GTACGCGTCCAAAATT",1,6.21,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S43G T55S Y121P R127E F134T",5
"lib2","SARS-CoV-2","GTACGCTACGTACTAC",2,3.37,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","GTACGGACAATGAAGT",4,1.67,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib2","SARS-CoV-2","GTACGGACGTAACAGT",1,32.28,9.24,-1.6,0.1,1.93,1.06,0.01,"1 nonsynonymous","S108R",1
"lib2","SARS-CoV-2","GTACGGCACGAAGTAT",3,19.58,6,-4.84,1.78,3,1.18,0.01,">1 nonsynonymous","P96R N107H V173L",3
"lib2","SARS-CoV-2","GTACGGCATGCCAGCA",11,179.61,8.1,-2.74,0.13,1.62,1.09,0.01,">1 nonsynonymous","Y121T G155R",2
"lib2","SARS-CoV-2","GTACGGGATAAAACGT",2,79.97,10.79,-0.04,0.05,2.94,1.07,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","GTACGGGATAAAGAAA",3,50.15,10.23,-0.61,0.05,2.95,1,0,">1 nonsynonymous","T3P S113G",2
"lib2","SARS-CoV-2","GTACGGGCTAACCAGT",7,7.45,8.75,-2.08,0.24,2.59,1,0.03,">1 nonsynonymous","N1T N13M A33C S43P L60A G155S P169V",7
"lib2","SARS-CoV-2","GTACGGTATAATGAGA",2,17.97,9.54,-1.3,0.18,2.01,1.05,0.01,">1 nonsynonymous","G9V A192S",2
"lib2","SARS-CoV-2","GTACGGTATGGCCTCA",1,43.96,10.26,-0.57,0.05,3,1,0,">1 nonsynonymous","K87S N110L A192T",3
"lib2","SARS-CoV-2","GTACGTAAAAGATAGA",3,75.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W T46A N118P",3
"lib2","SARS-CoV-2","GTACGTAAACCCGGCA",7,134.37,10.75,-0.09,0.04,2.97,1.04,0,">1 nonsynonymous","G9D A105G",2
"lib2","SARS-CoV-2","GTACGTAATACTGAAG",8,78.35,10.41,-0.42,0.04,2.98,1.01,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","GTACGTACACGACAAA",6,35.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D S19R V71K W106R",4
"lib2","SARS-CoV-2","GTACGTATAGTCTATC",2,13.44,10.75,-0.09,0.12,2.76,1.23,0.01,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","GTACGTATGAAATCTG",16,277.46,9.51,-1.33,0.05,2.79,1.05,0,">1 nonsynonymous","T63C K114S G174W",3
"lib2","SARS-CoV-2","GTACGTCCAAAGCCAT",4,19.31,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","I2N S19V N64L V103N G152Y",5
"lib2","SARS-CoV-2","GTACGTGCATAGCGTT",4,0,NA,NA,NA,NA,NA,NA,"stop","G9I C49S V173M K198*",4
"lib2","SARS-CoV-2","GTACGTGCGAGTAAAT",2,13.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R16L P96F",2
"lib2","SARS-CoV-2","GTACGTTAAAACCTCA",4,16.57,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","P82I R179G",2
"lib2","SARS-CoV-2","GTACGTTATGCCCATG",4,0,NA,NA,NA,NA,NA,NA,"stop","T3L S43T T55* D137R",4
"lib2","SARS-CoV-2","GTACGTTCCCAAAATT",2,37.34,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62L Y143P",2
"lib2","SARS-CoV-2","GTACGTTCCGATTCAC",5,105.59,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N157V Y178K",2
"lib2","SARS-CoV-2","GTACGTTGAATGTCAC",10,172.18,9.99,-0.85,0.03,2.92,1.07,0,">1 nonsynonymous","T63D S113G C195R",3
"lib2","SARS-CoV-2","GTACGTTGGAGTAACC",9,120.89,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N64K P133S S139R G172N",4
"lib2","SARS-CoV-2","GTACTAAAAAAACGTA",4,56.98,10.42,-0.41,0.06,2.85,1.08,0,">1 nonsynonymous","S45P S53A",2
"lib2","SARS-CoV-2","GTACTAAAATTATCAA",2,29.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1V L95T N107K S200L",4
"lib2","SARS-CoV-2","GTACTAAAATTCGCCT",6,0.39,NA,NA,NA,NA,NA,NA,"stop","C49I K56T G146* F156H T201R",5
"lib2","SARS-CoV-2","GTACTAAACGACTTAG",2,31.51,10.81,-0.03,0.06,2.99,1.04,0,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","GTACTAAAGAGATGCC",11,83.82,8.98,-1.86,0.22,1.5,1.12,0.02,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","GTACTAAAGTCGAGCA",9,0.43,NA,NA,NA,NA,NA,NA,"stop","V173*",1
"lib2","SARS-CoV-2","GTACTAACGATCACAA",5,56.88,8.41,-2.42,0.11,2.97,1.08,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","GTACTAACGGTCCACA",9,108.29,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V20L L38R N107L G116V K128S Q144R",6
"lib2","SARS-CoV-2","GTACTAACTTTCAAAA",4,90.87,10.67,-0.17,0.03,2.98,1.02,0,">1 nonsynonymous","A145V V153A",2
"lib2","SARS-CoV-2","GTACTAAGCCGTCCTG",2,25.79,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V71P R136P",2
"lib2","SARS-CoV-2","GTACTAAGTACCTACG",8,3.49,NA,NA,NA,NA,NA,NA,"stop","P7* I104L I138V",3
"lib2","SARS-CoV-2","GTACTAATCTAGACTA",4,6.59,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T15C P82R Y119F",3
"lib2","SARS-CoV-2","GTACTAATGGGAAATA",1,18.78,9.9,-0.94,0.1,2.95,1.05,0,">1 nonsynonymous","F8V S29H",2
"lib2","SARS-CoV-2","GTACTAATTGTATTGT",1,26.18,10.79,-0.04,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACTACAATATAATT",3,54.07,8.82,-2.02,0.1,1.68,1.07,0.01,">1 nonsynonymous","P82A A145S",2
"lib2","SARS-CoV-2","GTACTACAATGCACCG",1,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F A105D N107M",3
"lib2","SARS-CoV-2","GTACTACAGCACAACC",5,89.8,9.44,-1.4,0.08,2.01,1.1,0,">1 nonsynonymous","T63P K87Y P96D",3
"lib2","SARS-CoV-2","GTACTACAGTTAAATA",8,222.34,10.79,-0.05,0.03,2.97,1.05,0,">1 nonsynonymous","G9C L122F P197L",3
"lib2","SARS-CoV-2","GTACTACCGACAAAAA",2,7.39,9.94,-0.89,0.16,2.32,1.06,0.02,">1 nonsynonymous","F8L W106I",2
"lib2","SARS-CoV-2","GTACTACTAAATACCC",8,168.48,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","L5P A81S Y93D",3
"lib2","SARS-CoV-2","GTACTACTCAGACCAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42R S113L F160L",3
"lib2","SARS-CoV-2","GTACTACTGCCTAACG",1,23.36,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","A89F D112M N118M G152M G174N",5
"lib2","SARS-CoV-2","GTACTACTTAACTACA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","GTACTACTTCCAATAA",4,10.83,6.96,-3.87,0.75,1.5,1.27,0.05,">1 nonsynonymous","N1K F8R R27M L122A G146K",5
"lib2","SARS-CoV-2","GTACTACTTGCTTCGC",1,10.74,10.78,-0.05,0.08,2.99,1,0,">1 nonsynonymous","R16V D97Y",2
"lib2","SARS-CoV-2","GTACTAGAACAGGGAA",5,44.39,9.61,-1.23,0.1,2.53,1.12,0,">1 nonsynonymous","Q84R N107A",2
"lib2","SARS-CoV-2","GTACTAGACACCCGAG",3,54.39,10.78,-0.06,0.06,2.97,1.06,0,"1 nonsynonymous","D59A",1
"lib2","SARS-CoV-2","GTACTAGACTACAAGC",6,106.6,10.52,-0.32,0.04,2.92,1.07,0,">1 nonsynonymous","N120C V173I",2
"lib2","SARS-CoV-2","GTACTAGATACGCTGC",8,72.9,6.04,-4.8,1.03,1.5,1.2,0.02,">1 nonsynonymous","C61H A89H R136I",3
"lib2","SARS-CoV-2","GTACTAGCAACTTAAA",2,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M D59I N64T P82L",4
"lib2","SARS-CoV-2","GTACTAGCATGTCTCT",4,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V Y178V",2
"lib2","SARS-CoV-2","GTACTAGCTATCCTTA",5,37.15,7.83,-3.01,0.3,1.5,1.04,0.03,"1 nonsynonymous","S108L",1
"lib2","SARS-CoV-2","GTACTAGTACTCAAAC",11,0.26,NA,NA,NA,NA,NA,NA,"stop","S129* G155I L162Q N171P",4
"lib2","SARS-CoV-2","GTACTAGTCTGGCGAT",3,48.55,8.52,-2.32,0.16,1.5,1.07,0.01,">1 nonsynonymous","W23V S36Y V37P",3
"lib2","SARS-CoV-2","GTACTAGTGCAGGCTG",13,104.23,8.93,-1.91,0.31,1.5,1.02,0.04,">1 nonsynonymous","R16F W23V P96T S200Q",4
"lib2","SARS-CoV-2","GTACTAGTTATACCCC",9,148.84,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6S R27T L60P D90T N120I A145T F156T",7
"lib2","SARS-CoV-2","GTACTATAAACCTACT",16,134.92,9.77,-1.07,0.07,2.28,1.09,0,">1 nonsynonymous","G9V L57H K199T",3
"lib2","SARS-CoV-2","GTACTATACAATATAA",7,142.02,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y91A G101S N120R Q176S",4
"lib2","SARS-CoV-2","GTACTATACCCGGTGC",11,189.28,10.16,-0.68,0.03,2.94,1.02,0,">1 nonsynonymous","A42T D59G K87N D97L",4
"lib2","SARS-CoV-2","GTACTATAGATAATAT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Y L95N R136N",3
"lib2","SARS-CoV-2","GTACTATAGCAACCCA",4,33.97,9.37,-1.46,0.03,3,1.05,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","GTACTATAGTACGGAG",2,7.2,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","I28N D98N Y143N T201N",4
"lib2","SARS-CoV-2","GTACTATCGATTGAAA",7,81.76,8.64,-2.19,0.19,1.5,1.05,0.01,"1 nonsynonymous","F134P",1
"lib2","SARS-CoV-2","GTACTATCGTCCGGGT",3,18.44,9.94,-0.9,0.1,2.86,1.15,0,">1 nonsynonymous","C6S F44I T63K S200V",4
"lib2","SARS-CoV-2","GTACTATTATGACAAA",6,0.29,NA,NA,NA,NA,NA,NA,"stop","P7F A14* V180S",3
"lib2","SARS-CoV-2","GTACTCAAAAAAAGAA",8,23.62,6,-4.84,2,3,1.18,0,">1 nonsynonymous","P54G W106Y Y119A T170F",4
"lib2","SARS-CoV-2","GTACTCATCTCAATTA",2,8.33,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","F17W C61T I80G L188W",4
"lib2","SARS-CoV-2","GTACTCATGACGATAC",11,12.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C31R V65S C102G N120E",4
"lib2","SARS-CoV-2","GTACTCATTACTCAAC",2,5.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49S T63D F70K",3
"lib2","SARS-CoV-2","GTACTCATTCGTATTT",3,3.99,NA,NA,NA,NA,NA,NA,"stop","D98* Y121Q",2
"lib2","SARS-CoV-2","GTACTCATTTCATAAA",7,81.75,8.48,-2.36,0.08,2.41,1.04,0,">1 nonsynonymous","A18F K87R G116C",3
"lib2","SARS-CoV-2","GTACTCCGCATGTCTC",3,24.25,11.07,0.24,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACTCCTAAAGAATT",2,163.94,10.69,-0.15,0.04,2.95,1.07,0,">1 nonsynonymous","T3Y K128S",2
"lib2","SARS-CoV-2","GTACTCCTGAAGTCTG",1,18.5,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","F17R G152I F156L Y159L",4
"lib2","SARS-CoV-2","GTACTCCTTAATTCTT",1,29.83,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTACTCCTTGATCGTG",5,34.68,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","T170I R179M T201M",3
"lib2","SARS-CoV-2","GTACTCGGACTACCGA",2,65.88,10.78,-0.06,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACTCGGTAAGTCTA",9,155.43,10.06,-0.77,0.08,2.44,1.03,0,"1 nonsynonymous","P96C",1
"lib2","SARS-CoV-2","GTACTCTGAGCAACAC",2,21.53,8.01,-2.82,0.23,2.31,1.03,0.02,">1 nonsynonymous","G146P F156R",2
"lib2","SARS-CoV-2","GTACTCTGTCATCACC",4,13.11,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S41L C61D A81P A105G F126Q",5
"lib2","SARS-CoV-2","GTACTCTTAATTGAAT",2,50.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K94G N107L R127S",3
"lib2","SARS-CoV-2","GTACTCTTACATAAAA",1,17.73,10.15,-0.68,0.12,2.87,1,0.01,">1 nonsynonymous","C6Y K199V",2
"lib2","SARS-CoV-2","GTACTGAAGCCTATAA",4,119.51,9.3,-1.54,0.04,2.92,1.07,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","GTACTGAAGGAGAAAA",4,14.96,10.11,-0.73,0.24,2.07,1.18,0.02,">1 nonsynonymous","T100E Y123L",2
"lib2","SARS-CoV-2","GTACTGAAGTAGAGAC",6,76.72,8.93,-1.91,0.13,1.59,1.08,0.01,">1 nonsynonymous","F12G N30R",2
"lib2","SARS-CoV-2","GTACTGAGGATTCAAA",3,77.67,10.62,-0.21,0.05,2.99,1.04,0,"1 nonsynonymous","R27M",1
"lib2","SARS-CoV-2","GTACTGAGTATTTCAA",3,20.63,9.1,-1.73,0.25,1.5,1.04,0.05,">1 nonsynonymous","W23A S29M",2
"lib2","SARS-CoV-2","GTACTGATGTCACAAC",2,9.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E76H W106H S164L P169Q",4
"lib2","SARS-CoV-2","GTACTGATGTTTGCTA",11,0.89,NA,NA,NA,NA,NA,NA,"stop","S43T G146Y S184*",3
"lib2","SARS-CoV-2","GTACTGCCCTCGATGA",3,52.49,10.81,-0.02,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACTGCCTAAAAGAA",9,92.6,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S41H P96T P177M",3
"lib2","SARS-CoV-2","GTACTGGAACAGAAAA",2,17.57,10.81,-0.02,0.09,2.72,1.31,0.01,"1 nonsynonymous","T201W",1
"lib2","SARS-CoV-2","GTACTGGCCATTGTGA",3,29.85,10.82,-0.01,0.06,2.86,1.11,0,"1 nonsynonymous","T140I",1
"lib2","SARS-CoV-2","GTACTGGTTTTAGATT",6,36.42,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","S41H L57S G83F L95V Y119Q Y175R",6
"lib2","SARS-CoV-2","GTACTGTCTAAGAGAA",2,11.97,6.12,-4.72,2,1.5,1.14,0.05,">1 nonsynonymous","F12A W106G R136Q",3
"lib2","SARS-CoV-2","GTACTGTTTCTTAGTT",3,22.87,10.12,-0.71,0.1,2.97,1.01,0.01,">1 nonsynonymous","N24V A42C",2
"lib2","SARS-CoV-2","GTACTTAAACAACTAA",2,9.57,8.54,-2.29,0.16,2.76,1,0.01,">1 nonsynonymous","I2T S45Q N157T",3
"lib2","SARS-CoV-2","GTACTTAAATGTCATC",1,8.76,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","V11S G86V R136V P149I K198S",5
"lib2","SARS-CoV-2","GTACTTAACAAATAAG",11,111.17,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L57P R73V S184P",3
"lib2","SARS-CoV-2","GTACTTACAAATAACT",4,57.09,10.67,-0.17,0.03,2.94,1.05,0,">1 nonsynonymous","A33V N58Q",2
"lib2","SARS-CoV-2","GTACTTACATACTTAG",2,14.03,9.87,-0.96,0.09,2.09,1.07,0.01,">1 nonsynonymous","T63W D90W",2
"lib2","SARS-CoV-2","GTACTTACTTGCAAAG",4,2.42,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib2","SARS-CoV-2","GTACTTATATAATTAA",3,119.23,8.23,-2.61,0.11,1.95,1.05,0,">1 nonsynonymous","S19M D59G L60I F156K",4
"lib2","SARS-CoV-2","GTACTTATATCCTTTA",4,85.49,8.22,-2.62,0.14,1.99,1.15,0.01,">1 nonsynonymous","A81Q T85F G117N",3
"lib2","SARS-CoV-2","GTACTTATGAATACTC",1,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68R",1
"lib2","SARS-CoV-2","GTACTTATTAGCATAT",3,15.98,8.83,-2.01,0.2,1.92,1.19,0.02,">1 nonsynonymous","A89G V173G",2
"lib2","SARS-CoV-2","GTACTTCGAACGCAAG",5,349.06,9.79,-1.04,0.05,2.05,1.01,0,">1 nonsynonymous","I2S P96F P197C",3
"lib2","SARS-CoV-2","GTACTTCGCCCATTCA",2,13.35,7.75,-3.09,0.26,2.05,1.09,0.01,">1 nonsynonymous","V32L W106L Y119F",3
"lib2","SARS-CoV-2","GTACTTCGGAGATCAA",6,87.99,10.8,-0.03,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTACTTCTTCCAACAC",4,1.82,NA,NA,NA,NA,NA,NA,"stop","W106* Y119* G155Y",3
"lib2","SARS-CoV-2","GTACTTGAGGGCCCTA",1,14.95,8.59,-2.25,0.04,2.73,1.01,0,">1 nonsynonymous","A14Y L122F L125P",3
"lib2","SARS-CoV-2","GTACTTGCGCCCCCGC",2,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117F L131F",2
"lib2","SARS-CoV-2","GTACTTGCGCGAAATG",2,1.7,NA,NA,NA,NA,NA,NA,"stop","S41* L60Y V153I V173L",4
"lib2","SARS-CoV-2","GTACTTGGAATCTAAA",3,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L C150K E186L",3
"lib2","SARS-CoV-2","GTACTTGTTCAAATAC",22,14.98,NA,NA,NA,NA,NA,NA,"stop","G101Y S113E S147*",3
"lib2","SARS-CoV-2","GTACTTTACTCTTTAA",3,10.81,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14S S41Q V103T P149G",4
"lib2","SARS-CoV-2","GTACTTTCATAGAGGA",3,10.63,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41C L60S G101S D112W N157R G166A A190H",7
"lib2","SARS-CoV-2","GTACTTTTCCCGACCC",1,3.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F D90L",2
"lib2","SARS-CoV-2","GTAGAAAAAATACGTT",7,43.62,10.81,-0.03,0.05,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGAAAAATAATTAA",8,25.25,6.08,-4.76,0.8,1.5,1.16,0.02,">1 nonsynonymous","T3S V103T Y121I P149K",4
"lib2","SARS-CoV-2","GTAGAAAAATACCATT",21,1.84,NA,NA,NA,NA,NA,NA,"stop","C6R T63* S139C G155F G174E",5
"lib2","SARS-CoV-2","GTAGAAAAATCAAGAA",18,134.74,7.09,-3.75,0.31,1.5,1.15,0.02,">1 nonsynonymous","T3I Y39I G51M L57S K87T",5
"lib2","SARS-CoV-2","GTAGAAAACCACCAGC",9,92.04,6,-4.84,1.65,3,1.12,0,">1 nonsynonymous","Y93C L162A",2
"lib2","SARS-CoV-2","GTAGAAAATCATCACT",5,23.15,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","A33N Y39M A105P",3
"lib2","SARS-CoV-2","GTAGAAAATCCCAGTA",2,29.8,9.08,-1.75,0.14,2.5,1.11,0.01,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","GTAGAAAATCTCACCA",6,19.96,10.19,-0.65,0.05,2.89,1,0,"1 nonsynonymous","D34P",1
"lib2","SARS-CoV-2","GTAGAAAATGTATATT",3,11.6,9.32,-1.52,0.11,2.59,1.01,0.01,">1 nonsynonymous","Y119R R136I T148H",3
"lib2","SARS-CoV-2","GTAGAAACACGGTAGC",3,60.75,9.76,-1.08,0.12,2.16,1.1,0.01,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","GTAGAAACATAGCAGG",3,62.7,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L95M T100I P177T",3
"lib2","SARS-CoV-2","GTAGAAACGATAAACG",3,62.89,10.02,-0.81,0.04,2.75,1.08,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","GTAGAAACGCTTGGCC",6,1.8,NA,NA,NA,NA,NA,NA,"stop","I2V K132M P149I T170* P191R",5
"lib2","SARS-CoV-2","GTAGAAACGTCCTACT",3,54.97,10.76,-0.08,0.05,2.91,1.06,0,">1 nonsynonymous","R27K E141I",2
"lib2","SARS-CoV-2","GTAGAAATCAGACAAA",11,13.13,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6S R27K S36Y Q79W G83K Q163K",6
"lib2","SARS-CoV-2","GTAGAAATTATTCGTT",1,37.23,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","GTAGAACAGAAAAACA",9,1.91,NA,NA,NA,NA,NA,NA,"stop","N4W T85D D90* Y123V Y178R",5
"lib2","SARS-CoV-2","GTAGAACCTGTAGGTG",15,1.9,NA,NA,NA,NA,NA,NA,"stop","A89T Y165*",2
"lib2","SARS-CoV-2","GTAGAACGAAATGAAC",4,1.03,NA,NA,NA,NA,NA,NA,"stop","A14D K87T R127*",3
"lib2","SARS-CoV-2","GTAGAACGAATCATTC",5,42.78,9.99,-0.85,0.09,2.5,1,0,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","GTAGAACGCACCATGA",1,5.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K P82W",2
"lib2","SARS-CoV-2","GTAGAAGAAGCTCGAA",4,58.81,6,-4.84,2,1.5,1.23,0.08,">1 nonsynonymous","N1L Y91N S113V G172T",4
"lib2","SARS-CoV-2","GTAGAAGCGCATAAAC",4,21.46,9.57,-1.27,0.14,1.85,1.11,0.01,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","GTAGAAGTAAGGTTTA",4,83.81,6.05,-4.79,1.05,1.5,1.17,0.02,">1 nonsynonymous","V37S G86W A105L K114W Y121H V173R",6
"lib2","SARS-CoV-2","GTAGAATAGCAATCTG",2,9.83,6.07,-4.77,0.66,3,1.14,0.01,">1 nonsynonymous","C61N T85A A105S E135P P161L",5
"lib2","SARS-CoV-2","GTAGAATAGTTGATAA",3,122.92,10.77,-0.06,0.04,2.93,1.08,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","GTAGAATATATATAAA",3,47.85,10.89,0.06,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGAATCAAAGTGAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W S53T L60G K132E",4
"lib2","SARS-CoV-2","GTAGAATCCTGGTCAC",6,106.3,10.9,0.07,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGAATGTGTCCATA",6,127.45,10.01,-0.82,0.05,2.95,1.04,0,">1 nonsynonymous","L5V E141G G166S",3
"lib2","SARS-CoV-2","GTAGACAAACGGACTT",2,32.9,10.35,-0.49,0.12,2.64,1.16,0.01,">1 nonsynonymous","D34S T55W T201R",3
"lib2","SARS-CoV-2","GTAGACAACCGAACAC",5,80.03,10.1,-0.74,0.07,2.46,1.06,0,">1 nonsynonymous","I2V F62Y Y91R",3
"lib2","SARS-CoV-2","GTAGACAAGTAAGATG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L A33M F99D",3
"lib2","SARS-CoV-2","GTAGACACGGAATTAT",5,66.03,10.75,-0.08,0.04,2.94,1.07,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","GTAGACACTATAGATA",7,19.36,8.61,-2.23,0.41,1.5,1.07,0.04,">1 nonsynonymous","C6S D98P K128G P149M",4
"lib2","SARS-CoV-2","GTAGACATAAAAACAC",2,5.73,9.79,-1.05,0.33,2.52,1.14,0.02,">1 nonsynonymous","A42C C61N F99Y",3
"lib2","SARS-CoV-2","GTAGACATCCCCTATA",4,19.5,6.01,-4.82,0.87,1.5,1.12,0.01,">1 nonsynonymous","T63R N107L P169R A190C",4
"lib2","SARS-CoV-2","GTAGACCAACCTGTTA",10,3.93,NA,NA,NA,NA,NA,NA,"stop","W23S G146*",2
"lib2","SARS-CoV-2","GTAGACCCTACTCTGA",12,189.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8D S29H N157I",3
"lib2","SARS-CoV-2","GTAGACGACAAACATG",1,39.63,10.69,-0.15,0.03,2.94,1.05,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","GTAGACGATTGTTGTT",2,68.85,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G74T K94C F126L",3
"lib2","SARS-CoV-2","GTAGACGTAGCAGGAG",6,117.23,10.48,-0.36,0.04,2.95,1.06,0,">1 nonsynonymous","K87T E186S",2
"lib2","SARS-CoV-2","GTAGACTAAACGACGC",4,0.57,NA,NA,NA,NA,NA,NA,"stop","R27* V37L G86* D112L Y119K",5
"lib2","SARS-CoV-2","GTAGACTCTTACGAAC",1,5.64,11.09,0.25,0.15,2.88,1.13,0.01,">1 nonsynonymous","S41P I88V L122S P197L",4
"lib2","SARS-CoV-2","GTAGACTTTCTCGCAT",4,7.89,10.83,-0.01,0.1,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGAGAAAATCGTCT",5,96.58,10.52,-0.31,0.04,2.93,1.05,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","GTAGAGAATAGTTCAT",3,20.34,6,-4.84,2,1.5,1.28,0.02,"1 nonsynonymous","I72K",1
"lib2","SARS-CoV-2","GTAGAGAATGACGGCT",10,67.43,9.23,-1.61,0.19,1.5,1.07,0.02,">1 nonsynonymous","T85S V103A",2
"lib2","SARS-CoV-2","GTAGAGACCCGGGAGG",3,1408.88,10.67,-0.17,0.02,2.96,1.05,0,">1 nonsynonymous","I2N K114T P149S",3
"lib2","SARS-CoV-2","GTAGAGAGCTCTCTCG",7,0.9,NA,NA,NA,NA,NA,NA,"stop","L122W V153L G174*",3
"lib2","SARS-CoV-2","GTAGAGATCTGACATG",1,15.46,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21H Y50N C150S",3
"lib2","SARS-CoV-2","GTAGAGCACTGCTCGT",14,1.48,NA,NA,NA,NA,NA,NA,"stop","C6Y V20A Y39N S53E Y143* G155Y",6
"lib2","SARS-CoV-2","GTAGAGCCACGCACCT",2,59.25,10.17,-0.67,0.09,2.65,1.01,0,">1 nonsynonymous","K26G P197R",2
"lib2","SARS-CoV-2","GTAGAGGAACACGAAA",4,31.68,10.09,-0.74,0.12,2.81,1.05,0.01,">1 nonsynonymous","V11P L122S",2
"lib2","SARS-CoV-2","GTAGAGGTAGAATCAA",3,9.45,9.19,-1.65,0.18,2.11,1.19,0.01,">1 nonsynonymous","A14E C31P K87T D98E F134L",5
"lib2","SARS-CoV-2","GTAGAGTTATATTAAC",5,24.46,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C31W P82W D98M",3
"lib2","SARS-CoV-2","GTAGATAAACATTTAT",9,121.23,9.7,-1.13,0.03,2.85,1.01,0,">1 nonsynonymous","K87F L162F",2
"lib2","SARS-CoV-2","GTAGATAAACGGTAAT",2,20.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F99L W106R F126R E135M",4
"lib2","SARS-CoV-2","GTAGATAACAAGTACG",1,16.04,9.73,-1.1,0.09,2.81,1.07,0.01,">1 nonsynonymous","T100L Y121P",2
"lib2","SARS-CoV-2","GTAGATACAACTCTAG",1,41.82,10.74,-0.09,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGATACTTTCTACA",11,2.84,NA,NA,NA,NA,NA,NA,"stop","S29G L38* L95V",3
"lib2","SARS-CoV-2","GTAGATAGAACATACC",3,38.29,10.51,-0.33,0.04,2.98,1,0,">1 nonsynonymous","C61R I138P T201I",3
"lib2","SARS-CoV-2","GTAGATAGACAACCCA",8,106.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25C T100P N107T C158T",4
"lib2","SARS-CoV-2","GTAGATAGCATGGTCT",6,108.81,10.28,-0.55,0.05,2.92,1.07,0,">1 nonsynonymous","F8M Q144R",2
"lib2","SARS-CoV-2","GTAGATAGGAGAGTTA",2,42.34,8.85,-1.99,0.11,2.3,1.13,0,">1 nonsynonymous","K56F I142R",2
"lib2","SARS-CoV-2","GTAGATAGTCCGTCCA",7,99.6,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60S G152P P161F",3
"lib2","SARS-CoV-2","GTAGATATTTAGTTAA",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L I88K K198E",3
"lib2","SARS-CoV-2","GTAGATCAAAGATACG",3,5.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","GTAGATCCGATTACAA",5,220.3,10.98,0.14,0.07,2.91,1.09,0,">1 nonsynonymous","N130R P197Q",2
"lib2","SARS-CoV-2","GTAGATGAAAGTCCGT",2,26.05,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","F47S P82S",2
"lib2","SARS-CoV-2","GTAGATGAACGCATAA",3,48.23,8.64,-2.19,0.13,2.01,1.12,0.01,">1 nonsynonymous","Q79M L162F T201E",3
"lib2","SARS-CoV-2","GTAGATGAGCTATACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I142V Q168L",2
"lib2","SARS-CoV-2","GTAGATGCAACTAAAC",4,170.61,10.14,-0.7,0.05,2.61,1.06,0,">1 nonsynonymous","S36N N58E A89T N151K",4
"lib2","SARS-CoV-2","GTAGATGCGTTTTAAT",1,10.47,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","N4F S43A C102S",3
"lib2","SARS-CoV-2","GTAGATTAAAGGTTAC",3,0,NA,NA,NA,NA,NA,NA,"stop","N13K D112*",2
"lib2","SARS-CoV-2","GTAGATTAGGATCGAG",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38W T100V N107S",3
"lib2","SARS-CoV-2","GTAGATTCCACATCTG",2,54.9,10.12,-0.72,0.08,2.52,1.08,0,"1 nonsynonymous","P133W",1
"lib2","SARS-CoV-2","GTAGATTGAATGACAG",7,127,6.39,-4.45,0.29,1.5,1.16,0,">1 nonsynonymous","P82Q Y175P",2
"lib2","SARS-CoV-2","GTAGATTGGCATGGGT",5,39.37,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6D R27T S43L F99L I138W",5
"lib2","SARS-CoV-2","GTAGATTTAAATTCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3I V32G N40* I88E F134S P149T L162S",7
"lib2","SARS-CoV-2","GTAGATTTAACGAGTT",2,5.43,7.01,-3.83,1.09,3,1.24,0.01,">1 nonsynonymous","F8R K132E I142F P149H T201L",5
"lib2","SARS-CoV-2","GTAGATTTAATCAATT",5,45.18,10.69,-0.15,0.06,2.81,1.2,0,">1 nonsynonymous","L5D R27Q",2
"lib2","SARS-CoV-2","GTAGCAAAATGACTTG",4,14.37,6.31,-4.52,1.03,1.5,1.26,0.07,">1 nonsynonymous","L95S S184K",2
"lib2","SARS-CoV-2","GTAGCAACAACTAGGG",4,43.77,8.26,-2.58,0.12,2.2,1.1,0.01,">1 nonsynonymous","A22K Y119I E141V C195F T201R",5
"lib2","SARS-CoV-2","GTAGCAACCTCTCCTA",1,7.43,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","S19R D98L G117D E135P Y143H",5
"lib2","SARS-CoV-2","GTAGCAAGACGTAGAG",5,97.12,10.8,-0.04,0.06,2.9,1.14,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","GTAGCAATAACAAAAG",1,8.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19W D97I W106F Y121L K128T",5
"lib2","SARS-CoV-2","GTAGCAATAAGGGAGA",11,173.38,8.62,-2.21,0.08,2.9,1.04,0,">1 nonsynonymous","S45F F156E",2
"lib2","SARS-CoV-2","GTAGCACACCACGCGG",5,18.96,10,-0.84,0.14,2.2,1.04,0.01,">1 nonsynonymous","A33I G51Y",2
"lib2","SARS-CoV-2","GTAGCACCGAGCTTGA",1,5.39,10.01,-0.83,0.04,1.96,1.03,0,">1 nonsynonymous","I2T A89M",2
"lib2","SARS-CoV-2","GTAGCACGATACTCGA",3,5.99,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A22T C31W D59I I88K",4
"lib2","SARS-CoV-2","GTAGCACGTTCCCGCA",7,77.98,9.81,-1.03,0.05,2.41,1.06,0,">1 nonsynonymous","S41V N107S",2
"lib2","SARS-CoV-2","GTAGCACTCATTACCT",1,7.02,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C6R I28C C61R F99R C150R",5
"lib2","SARS-CoV-2","GTAGCAGCACACATTT",8,4.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","GTAGCAGGCTCATAAA",8,24.69,6,-4.84,1.79,3,1.19,0.01,">1 nonsynonymous","G9S K48G L57H Q84I S129R",5
"lib2","SARS-CoV-2","GTAGCAGTAAGACCCC",6,61.18,6.08,-4.76,0.43,1.5,1.11,0,">1 nonsynonymous","L122V R127W P133T",3
"lib2","SARS-CoV-2","GTAGCATACGCTCCCA",1,10.8,10.71,-0.13,0.16,2.94,1,0,">1 nonsynonymous","K26F N64S V115L",3
"lib2","SARS-CoV-2","GTAGCATCAAAATTCC",2,4.62,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTAGCATTAAACAGAA",5,0,NA,NA,NA,NA,NA,NA,"stop","V11Y V65R Y91F Q144N L162* H189S K199S",7
"lib2","SARS-CoV-2","GTAGCATTGTATAAAT",4,0.46,NA,NA,NA,NA,NA,NA,"stop","I2F S129* G146Q",3
"lib2","SARS-CoV-2","GTAGCCCAGAATACAA",2,12,6,-4.84,0.7,3,1.1,0,">1 nonsynonymous","L95Q A105S",2
"lib2","SARS-CoV-2","GTAGCCCCAGTCTTCA",1,2.94,NA,NA,NA,NA,NA,NA,"stop","S19* Q84L G101E K132G V173I",5
"lib2","SARS-CoV-2","GTAGCCCCCTCAGGCA",7,36.79,9.87,-0.96,0.1,1.89,1.09,0,">1 nonsynonymous","I2M C49Y",2
"lib2","SARS-CoV-2","GTAGCCCCTAAAATAG",5,72.49,10.79,-0.05,0.06,2.88,1.14,0,"1 nonsynonymous","S139T",1
"lib2","SARS-CoV-2","GTAGCCCCTTCACGTG",1,19.53,10.26,-0.58,0.09,2.82,1,0,">1 nonsynonymous","P54Q Y121N",2
"lib2","SARS-CoV-2","GTAGCCCTATGAAAAG",2,8.53,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F44R T55V C150Y",3
"lib2","SARS-CoV-2","GTAGCCGAGCTCAGAC",3,63.72,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G9L W106G Y121S",3
"lib2","SARS-CoV-2","GTAGCCTAACAATTGG",7,9.56,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","A33G V77L G116S R127W",4
"lib2","SARS-CoV-2","GTAGCCTACCAGGACG",4,186.97,10.07,-0.76,0.05,2.56,1.03,0,">1 nonsynonymous","F62K D98E S129H",3
"lib2","SARS-CoV-2","GTAGCCTATTTGTAGA",5,104.46,10.74,-0.09,0.03,2.95,1.05,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","GTAGCCTCGCAAATGA",2,17.09,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L57F V103A",2
"lib2","SARS-CoV-2","GTAGCCTCTAAGGGAA",5,39.23,8.66,-2.18,0.23,1.5,1.07,0.02,">1 nonsynonymous","L131S V173N K199S",3
"lib2","SARS-CoV-2","GTAGCCTTATGGTAGT",4,12.83,9.31,-1.52,0.23,1.59,1.08,0.04,">1 nonsynonymous","V65E A190V S200R",3
"lib2","SARS-CoV-2","GTAGCGAGATAAGAAA",2,7.94,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F99C W106S F156P",3
"lib2","SARS-CoV-2","GTAGCGCGTAATAACA",1,27.66,10.84,0,0.08,2.92,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GTAGCGCTATTCAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86N T201I",2
"lib2","SARS-CoV-2","GTAGCGGCATTTTCAA",2,8.9,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56D P82T Y121L",3
"lib2","SARS-CoV-2","GTAGCGGGCCTTTATA",1,6.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41A C61N G83K V181N",4
"lib2","SARS-CoV-2","GTAGCGGTGCTAAAAA",4,59.81,10.81,-0.03,0.05,2.94,1.08,0,"1 nonsynonymous","N110R",1
"lib2","SARS-CoV-2","GTAGCGTTATCGGATT",5,0.39,NA,NA,NA,NA,NA,NA,"stop","L5W T15L D90L T100* F126L",5
"lib2","SARS-CoV-2","GTAGCTAAATACGTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y T85K F156K",3
"lib2","SARS-CoV-2","GTAGCTAACAACAATA",4,47.44,10.16,-0.67,0.05,2.84,1.06,0,">1 nonsynonymous","K48S S184L",2
"lib2","SARS-CoV-2","GTAGCTAAGACGCCCA",3,51.74,7.39,-3.44,0.23,1.5,1.08,0.01,">1 nonsynonymous","S45I W106C",2
"lib2","SARS-CoV-2","GTAGCTAGGGAGCTTA",1,9.32,6,-4.84,2,3,1.2,0.03,">1 nonsynonymous","D68R N109W G152S S200L",4
"lib2","SARS-CoV-2","GTAGCTATACCGCCAC",1,33.37,10.24,-0.6,0.06,2.84,1.01,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","GTAGCTATATGAAATA",2,10.03,10.46,-0.37,0.07,2.8,1.18,0,">1 nonsynonymous","S139H K199N",2
"lib2","SARS-CoV-2","GTAGCTCCAACCAGAC",5,46.06,10.35,-0.48,0.08,2.75,1.06,0,">1 nonsynonymous","I2E G51M",2
"lib2","SARS-CoV-2","GTAGCTCCTTGAGAGT",6,55.9,10,-0.83,0.08,2.26,1.06,0,">1 nonsynonymous","N4L R136L",2
"lib2","SARS-CoV-2","GTAGCTGGGAGCGACT",5,1.62,NA,NA,NA,NA,NA,NA,"stop","S19* A145S V180D",3
"lib2","SARS-CoV-2","GTAGCTTAAACGGGAT",7,141.67,10.63,-0.21,0.05,2.96,1.02,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","GTAGCTTAATGAACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","P7* I138Y",2
"lib2","SARS-CoV-2","GTAGGAAATATCGTTA",12,105,6.16,-4.68,0.91,1.5,1.18,0.03,">1 nonsynonymous","A105F G155Y",2
"lib2","SARS-CoV-2","GTAGGAATAAAGCAAG",3,33.99,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","N92W",1
"lib2","SARS-CoV-2","GTAGGAATCTTAGACA",7,19.75,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","N1S V52A S53Y A105R K128Q Q144R N151T",7
"lib2","SARS-CoV-2","GTAGGACCCTGGTAAA",4,5.45,NA,NA,NA,NA,NA,NA,"stop","C6V I88F Y165*",3
"lib2","SARS-CoV-2","GTAGGAGACTCTATTT",15,168.85,9.99,-0.84,0.06,2.68,1.06,0,">1 nonsynonymous","A14V S164Y",2
"lib2","SARS-CoV-2","GTAGGAGATATTCCTT",12,82.39,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I28G S113V L162Y T170I",4
"lib2","SARS-CoV-2","GTAGGAGTAAAAGTCC",6,70.71,9.94,-0.89,0.06,2.51,1.01,0,">1 nonsynonymous","E10D T15D I80L",3
"lib2","SARS-CoV-2","GTAGGATAATAAAATC",4,7.92,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","L57S I104N G146V",3
"lib2","SARS-CoV-2","GTAGGATGTGTGACAA",6,45.49,9.66,-1.18,0.08,2.2,1.01,0,">1 nonsynonymous","T3N T85I P96N",3
"lib2","SARS-CoV-2","GTAGGCAAAAGTGCCG",15,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Q F70L",2
"lib2","SARS-CoV-2","GTAGGCAACAATAGTA",3,20.02,8.26,-2.57,0.34,1.65,1.17,0.05,">1 nonsynonymous","K56S W106G F126H",3
"lib2","SARS-CoV-2","GTAGGCATATTCTTGG",2,5.77,7.86,-2.98,0.35,1.51,1.13,0.02,">1 nonsynonymous","N4D P96F K199N",3
"lib2","SARS-CoV-2","GTAGGCCAACCAACAA",2,78.25,8.07,-2.77,0.16,1.5,1.07,0.01,">1 nonsynonymous","F12I A105S S113M",3
"lib2","SARS-CoV-2","GTAGGCCATCACGACA",8,9.56,NA,NA,NA,NA,NA,NA,"stop","S36L D97P E154*",3
"lib2","SARS-CoV-2","GTAGGCCGCCTATAAT",8,4.76,NA,NA,NA,NA,NA,NA,"stop","N13G T55* E141V",3
"lib2","SARS-CoV-2","GTAGGCGAATTATCGA",8,94.61,10.81,-0.03,0.05,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGGCGCACACAAAA",6,27.92,7.77,-3.06,0.23,1.66,1.13,0.02,">1 nonsynonymous","A14S D112F",2
"lib2","SARS-CoV-2","GTAGGCTGCGTGGATA",4,25.77,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L5S G51Y P82T K94T S200M",5
"lib2","SARS-CoV-2","GTAGGGAACTAAGACT",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T T201C",2
"lib2","SARS-CoV-2","GTAGGGGGCAAGTTCT",2,42.3,9.36,-1.48,0.2,1.57,1.1,0.02,">1 nonsynonymous","T3R I28M A42P I104K",4
"lib2","SARS-CoV-2","GTAGGTAACGCAACCT",2,0.04,NA,NA,NA,NA,NA,NA,"stop","L5E D97I L111T Y121G E141*",5
"lib2","SARS-CoV-2","GTAGGTAATCTCTACG",2,27.29,8.4,-2.44,0.13,2.07,1.02,0.01,">1 nonsynonymous","N109T L122M R136L I142V",4
"lib2","SARS-CoV-2","GTAGGTAATTGTGATC",3,66.64,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4K Y123L G172L",3
"lib2","SARS-CoV-2","GTAGGTACACATCATT",11,123.77,9.43,-1.4,0.09,1.98,1.11,0,">1 nonsynonymous","L5K F185R",2
"lib2","SARS-CoV-2","GTAGGTCGCCATATCC",1,22.23,10.84,0,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGGTGGACCATCAA",6,119.4,10.57,-0.27,0.03,2.89,1.11,0,">1 nonsynonymous","G83C P149L",2
"lib2","SARS-CoV-2","GTAGGTGTACAATCGG",3,25.15,7.24,-3.6,0.25,1.5,1.15,0.02,">1 nonsynonymous","E10D G86R I138L P149Q L188V",5
"lib2","SARS-CoV-2","GTAGGTGTCCCTTAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10G N151I F156H L183*",4
"lib2","SARS-CoV-2","GTAGGTTAAAATTCTG",3,15.13,7.57,-3.27,0.31,1.5,1.06,0.02,"1 nonsynonymous","N107W",1
"lib2","SARS-CoV-2","GTAGGTTAAACTTTAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","T15* F70E Y121S P197Q",4
"lib2","SARS-CoV-2","GTAGGTTTCTAACACA",1,17.25,10.67,-0.17,0.08,2.83,1.11,0,"1 nonsynonymous","E10R",1
"lib2","SARS-CoV-2","GTAGGTTTTTGACTCG",2,20.12,10.79,-0.05,0.07,2.91,1.12,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","GTAGTAAAAAAGTGTG",10,87.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16L C31T T85S N109E P161G P197V",6
"lib2","SARS-CoV-2","GTAGTAAAAACAGATG",1,36.79,8.73,-2.1,0.17,1.5,1.03,0.01,">1 nonsynonymous","L5M L60R Y121N N130C E154G P197K",6
"lib2","SARS-CoV-2","GTAGTAAACACATGCC",12,220.42,9.72,-1.12,0.04,2.13,1.03,0,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","GTAGTAACATCACTGT",9,3.81,NA,NA,NA,NA,NA,NA,"stop","K87R Y91* T100N S113D",4
"lib2","SARS-CoV-2","GTAGTAACTGAACCGT",1,30.66,10.11,-0.73,0.07,2.9,1,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","GTAGTAAGAGTTGCGA",1,36.67,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G9W F17Q P82W K199P",4
"lib2","SARS-CoV-2","GTAGTAAGGATGGCTG",6,34.15,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V71G G101F",2
"lib2","SARS-CoV-2","GTAGTAAGTGTTCACA",6,167.76,8.77,-2.06,0.08,1.5,1.06,0,">1 nonsynonymous","N30E G86N",2
"lib2","SARS-CoV-2","GTAGTACAAAGGTTAT",4,67.18,9.59,-1.25,0.11,1.93,1.04,0,">1 nonsynonymous","N58A K94R R136V",3
"lib2","SARS-CoV-2","GTAGTACTCGACATTG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTAGTACTTAGGATGG",2,37.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N4T G51S V77A S113E G155Y S184C",6
"lib2","SARS-CoV-2","GTAGTAGACCTAAGAG",4,43.03,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S36L K56T F62L A89T A105Y",5
"lib2","SARS-CoV-2","GTAGTAGTTTATACGA",3,54.94,10.22,-0.61,0.05,2.7,1.11,0,">1 nonsynonymous","A42P R136A T201M",3
"lib2","SARS-CoV-2","GTAGTATCAAGGGATA",2,63.64,10.14,-0.7,0.04,2.83,1.06,0,">1 nonsynonymous","N120W K132C",2
"lib2","SARS-CoV-2","GTAGTATCCAAATACC",1,9.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F17A A33S Y165L",3
"lib2","SARS-CoV-2","GTAGTATCGATTATGA",3,24.42,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59I L131S H189L",3
"lib2","SARS-CoV-2","GTAGTCAAAATTCACG",3,57.21,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L38A C49G N120T P149F",4
"lib2","SARS-CoV-2","GTAGTCAAGGGCACTC",15,220.02,10.84,0.01,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGTCATACAATAAT",4,75.79,8.29,-2.55,0.12,1.7,1.07,0,">1 nonsynonymous","C6L C31M T63V Y121W V194I",5
"lib2","SARS-CoV-2","GTAGTCATAGACAATG",6,24.12,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C102R G172V",2
"lib2","SARS-CoV-2","GTAGTCCCCCTGACTA",2,10.69,10.83,0,0.08,2.97,1.04,0,"1 nonsynonymous","T3R",1
"lib2","SARS-CoV-2","GTAGTCCGGCTCTGCG",1,12.78,10.93,0.09,0.08,2.93,1.08,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","GTAGTCCGTAACCTCT",10,82.69,8.29,-2.55,0.15,2.12,1.04,0.01,">1 nonsynonymous","S43L Y165S P197G",3
"lib2","SARS-CoV-2","GTAGTCCTTTTGCATA",3,23.19,9.81,-1.03,0.11,2.22,1.07,0.01,">1 nonsynonymous","E10W A42D N64I",3
"lib2","SARS-CoV-2","GTAGTCGTTTCCGCAA",4,36.76,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10W N64W W106K",3
"lib2","SARS-CoV-2","GTAGTCTATAAGTTGT",2,32.86,10.33,-0.51,0.07,2.8,1.08,0,"1 nonsynonymous","P96D",1
"lib2","SARS-CoV-2","GTAGTCTCCATTGGGA",6,115.89,9.18,-1.65,0.1,2.15,1.08,0,"1 nonsynonymous","Y165L",1
"lib2","SARS-CoV-2","GTAGTCTCTGGTGAAA",1,8.5,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G51V D90I C102K N120R",4
"lib2","SARS-CoV-2","GTAGTCTCTTAATTAG",6,54.85,10.56,-0.27,0.05,2.96,1.04,0,">1 nonsynonymous","G9F L60Y I88V F134Y I142L",5
"lib2","SARS-CoV-2","GTAGTCTGGCTAAGTT",11,128.02,9.25,-1.58,0.04,2.91,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","GTAGTGAATGACGTAA",14,106.72,10.83,-0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGTGAATGTACAAA",9,38.03,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I2T Y91D Y123P Y165V",4
"lib2","SARS-CoV-2","GTAGTGACATAAACAT",6,54.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K114C P161L G166D Y175L S200K",5
"lib2","SARS-CoV-2","GTAGTGGGAAATTGAC",7,0.07,NA,NA,NA,NA,NA,NA,"stop","R127* P149T Y159S",3
"lib2","SARS-CoV-2","GTAGTGGTGCTCAGTT",1,8.54,9.93,-0.91,0.22,2.31,1.07,0.02,"1 nonsynonymous","V11E",1
"lib2","SARS-CoV-2","GTAGTGTTTCGTGATT",2,54.5,10.78,-0.06,0.03,2.96,1.05,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","GTAGTTAAAAAGCCAA",1,49.32,10.04,-0.79,0.02,3,1.01,0,">1 nonsynonymous","R27V K87E",2
"lib2","SARS-CoV-2","GTAGTTACCAGCACCG",1,34.76,8.48,-2.36,0.1,2.75,1.06,0,">1 nonsynonymous","K56G T100F I142S T170A",4
"lib2","SARS-CoV-2","GTAGTTATAGAATCAC",6,49.69,10.27,-0.57,0.05,2.86,1.04,0,">1 nonsynonymous","A42Y F62D",2
"lib2","SARS-CoV-2","GTAGTTATTCGATACG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","N151*",1
"lib2","SARS-CoV-2","GTAGTTATTGTTCGAT",5,65.45,10.77,-0.06,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTAGTTCAAGCTGTGA",9,26.17,8.64,-2.2,0.25,1.81,1.09,0.03,">1 nonsynonymous","A22V N64T G155P",3
"lib2","SARS-CoV-2","GTAGTTCAATAATTTG",2,42.58,8.56,-2.27,0.22,1.5,1,0.02,">1 nonsynonymous","G9R S19Q G152T",3
"lib2","SARS-CoV-2","GTAGTTCAGATTTCCC",3,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C K56N V77E G83I I88S L122Y",6
"lib2","SARS-CoV-2","GTAGTTCAGCGCTGTC",1,35.81,8.78,-2.06,0.09,2.87,1.12,0,"1 nonsynonymous","Y143Q",1
"lib2","SARS-CoV-2","GTAGTTCAGTATATAT",4,1.15,NA,NA,NA,NA,NA,NA,"stop","L5S A14R K56F D68R D97M N107P N120R I138* T170*",9
"lib2","SARS-CoV-2","GTAGTTCCCCGATACA",1,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Q D137E T201G",3
"lib2","SARS-CoV-2","GTAGTTCTGAATAAGC",4,24.22,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","C6K F12D P161L",3
"lib2","SARS-CoV-2","GTAGTTGCCACCAGGG",2,41.7,10.78,-0.05,0.04,2.99,1.01,0,">1 nonsynonymous","S41T P149K",2
"lib2","SARS-CoV-2","GTAGTTGGTTGAATAA",6,0.08,NA,NA,NA,NA,NA,NA,"stop","T85N T100N N130* Y143L P149M P197S",6
"lib2","SARS-CoV-2","GTAGTTGTCAAACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S L125S",2
"lib2","SARS-CoV-2","GTAGTTTACCGACTTG",3,26.58,9.26,-1.58,0.22,1.71,1.12,0.02,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GTAGTTTACGACCACA",16,3.29,NA,NA,NA,NA,NA,NA,"stop","F12N S41T Y119L L162G T170*",5
"lib2","SARS-CoV-2","GTAGTTTCGAGTATTA",2,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K R27L A42K P82F V103D E154S R179K",7
"lib2","SARS-CoV-2","GTAGTTTTTTAATTCC",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D A42H P82Q L183G",4
"lib2","SARS-CoV-2","GTATAAAAACATATCA",9,127.53,8.71,-2.13,0.19,1.5,1.1,0.02,"1 nonsynonymous","D137W",1
"lib2","SARS-CoV-2","GTATAAAAAGTCCCAC",5,2.3,NA,NA,NA,NA,NA,NA,"stop","V71* D97P K114Q V173A V181P",5
"lib2","SARS-CoV-2","GTATAAAAATTAAGAA",10,38.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14Y D34L I72G V153Y K199N",5
"lib2","SARS-CoV-2","GTATAAAAATTGGACA",10,111.01,10.58,-0.25,0.03,2.97,1.02,0,">1 nonsynonymous","Y35S S41Y S200I",3
"lib2","SARS-CoV-2","GTATAAAACATAAAAT",1,1036,9.17,-1.66,0.04,2.88,1.05,0,">1 nonsynonymous","Y123R E141V Q168M A190T T201I",5
"lib2","SARS-CoV-2","GTATAAAAGCTTCGAG",8,47.77,6,-4.84,2,3,1.12,0,">1 nonsynonymous","W23F I72S Y93K Y119G T201M",5
"lib2","SARS-CoV-2","GTATAAAATGGATATG",5,108.99,10.84,0,0.05,2.95,1.07,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","GTATAAACAAAGCTGA",2,31.02,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F17R V180G",2
"lib2","SARS-CoV-2","GTATAAACGACATCTG",3,13.24,10.74,-0.1,0.05,3,1.01,0,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","GTATAAACGAGGTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R Y93R G101L P149K",4
"lib2","SARS-CoV-2","GTATAAAGAACCGACA",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V F167I",2
"lib2","SARS-CoV-2","GTATAAAGAGTTAACC",2,16.84,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","C49Q",1
"lib2","SARS-CoV-2","GTATAAAGGATGGCAT",1,0.59,NA,NA,NA,NA,NA,NA,"stop","I2T C150* N151G P161I",4
"lib2","SARS-CoV-2","GTATAAAGGCACTTAT",4,48.35,10.52,-0.31,0.06,2.95,1.04,0,">1 nonsynonymous","A33V C61F D98A",3
"lib2","SARS-CoV-2","GTATAAAGGGCGCGTA",2,5.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6I D90S N130M S147C F167T",5
"lib2","SARS-CoV-2","GTATAAAGGTCGCAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* Y50G L162W",3
"lib2","SARS-CoV-2","GTATAAATCAGATTAC",1,18.6,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C61I F70H Y165H Q176R",4
"lib2","SARS-CoV-2","GTATAAATGGTCCACT",4,64.59,10.82,-0.01,0.05,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATAACAAAGACAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F L95A F126V",3
"lib2","SARS-CoV-2","GTATAACAAATGAGGG",7,110.11,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","V32P Y93V Y165H Y178H",4
"lib2","SARS-CoV-2","GTATAACACTAAGCAC",4,71.32,10.64,-0.2,0.05,2.9,1.1,0,"1 nonsynonymous","D59F",1
"lib2","SARS-CoV-2","GTATAACCAAACTATT",3,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69V R136I",2
"lib2","SARS-CoV-2","GTATAACCAACATCTC",2,41.48,10.74,-0.09,0.1,2.83,1.03,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","GTATAACCCATGAAAA",1,3.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4M T85F I104Y Y123D Y143T",5
"lib2","SARS-CoV-2","GTATAACCGATGCTAG",14,1.8,NA,NA,NA,NA,NA,NA,"stop","L95* S129*",2
"lib2","SARS-CoV-2","GTATAACCGCAAAACA",1,21.92,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","N4Y A81K K128V V173S",4
"lib2","SARS-CoV-2","GTATAACCTTTTATGT",2,17.41,10.27,-0.57,0.04,3,1,0,">1 nonsynonymous","D98C K114L",2
"lib2","SARS-CoV-2","GTATAACGCGACTGCA",1,0.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","GTATAACTCACTTCGA",14,180.45,8.95,-1.88,0.05,2.87,1.07,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","GTATAACTGAAATGAT",2,11.55,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D112R A145L",2
"lib2","SARS-CoV-2","GTATAACTGTCCAAAG",2,37.01,10.86,0.02,0.08,2.95,1.06,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","GTATAACTTCCAAAAG",11,1.07,NA,NA,NA,NA,NA,NA,"stop","A105M G174M S200*",3
"lib2","SARS-CoV-2","GTATAACTTGTATCGG",11,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S C6W G101D R124W E141I",5
"lib2","SARS-CoV-2","GTATAAGAGTTTAAGA",3,34.88,9.71,-1.12,0.1,2.1,1.06,0.01,">1 nonsynonymous","S43K F62N E135L",3
"lib2","SARS-CoV-2","GTATAAGCCGTACTAG",2,6.39,9.72,-1.12,0.38,2.31,1.1,0.03,">1 nonsynonymous","I2P K26D K94A",3
"lib2","SARS-CoV-2","GTATAAGGATAAACAA",9,174.77,10.82,-0.02,0.04,2.91,1.09,0,">1 nonsynonymous","R16N A22R",2
"lib2","SARS-CoV-2","GTATAAGGCGCTAAAT",6,76.13,8.45,-2.38,0.11,2.07,1.11,0,">1 nonsynonymous","E10A W106S T170Y P197W",4
"lib2","SARS-CoV-2","GTATAAGGGGAAACCA",3,8.7,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R16F F62P K87N V103G F134M F167K F185R",7
"lib2","SARS-CoV-2","GTATAAGGGGTTAACG",2,41,10.69,-0.15,0.08,2.81,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","GTATAAGTAGTCGAAT",2,5.64,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","P82T D90H Y175K",3
"lib2","SARS-CoV-2","GTATAATACTAGCTCT",3,33.81,6,-4.84,2,3,1.25,0.01,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","GTATAATAGGGATATA",2,17.06,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","I2L P54T I72Y D90S A145S",5
"lib2","SARS-CoV-2","GTATAATATGCTGATA",14,118.49,6,-4.84,1.91,1.5,1.17,0.01,">1 nonsynonymous","E10R Y91V E135H Q168I",4
"lib2","SARS-CoV-2","GTATAATATGGTATTA",5,150.08,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R27E Y35A V115G P177Y",4
"lib2","SARS-CoV-2","GTATAATATTGACGAT",4,53.73,10.62,-0.21,0.1,2.91,1.07,0.01,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","GTATAATCAACTTGCA",5,1.03,NA,NA,NA,NA,NA,NA,"stop","D97G G152* L162M",3
"lib2","SARS-CoV-2","GTATAATCAGGTAAAA",1,36.6,10.77,-0.06,0.03,2.95,1.07,0,">1 nonsynonymous","S41E K199T",2
"lib2","SARS-CoV-2","GTATAATCGATAGAAC",5,19.19,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","S53R Y121H F126K R136M T201K",5
"lib2","SARS-CoV-2","GTATAATCTACTCAAA",5,46.81,6,-4.84,2,2.64,1.14,0,">1 nonsynonymous","E10T R25E K114T L122V S164G",5
"lib2","SARS-CoV-2","GTATAATGATCTCACG",2,26.27,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V37S A89D F167T",3
"lib2","SARS-CoV-2","GTATAATGCGTAAGTT",3,37.72,10.89,0.06,0.06,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATAATGGTTCCGGT",3,40.96,10.66,-0.17,0.04,2.94,1.03,0,">1 nonsynonymous","S41C D90K S164R",3
"lib2","SARS-CoV-2","GTATAATTGCATTATA",13,50.97,6.16,-4.68,0.73,1.5,1.23,0.02,">1 nonsynonymous","N92A N118S",2
"lib2","SARS-CoV-2","GTATAATTTGAAATCG",7,24.69,7.15,-3.68,0.24,1.5,1.07,0.02,">1 nonsynonymous","D137K P149N",2
"lib2","SARS-CoV-2","GTATAATTTTTATATT",1,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119M Y175A",2
"lib2","SARS-CoV-2","GTATACAAACCCGCTA",18,336.15,7.05,-3.79,0.15,1.5,1.12,0,">1 nonsynonymous","W106Y S113F L122S",3
"lib2","SARS-CoV-2","GTATACAACAACCGGA",2,2.97,NA,NA,NA,NA,NA,NA,"stop","N40* T100N Y165E P191C",4
"lib2","SARS-CoV-2","GTATACAAGGAAGAAT",2,20.18,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8L T15R K56N P133D Y143C N151L",6
"lib2","SARS-CoV-2","GTATACAAGGGTGACA",12,327.06,8.94,-1.9,0.07,2.83,1.1,0,">1 nonsynonymous","L60H G166V Y178V",3
"lib2","SARS-CoV-2","GTATACAATAAACGGA",4,14.38,10.18,-0.66,0.07,2.96,1,0,"1 nonsynonymous","Q144I",1
"lib2","SARS-CoV-2","GTATACACCATACCTA",10,33.09,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6V I88F N92P K114V T148D",5
"lib2","SARS-CoV-2","GTATACACCTTACACT",2,20.84,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","N1T V77W N110E P133S Y175E",5
"lib2","SARS-CoV-2","GTATACACGAAGTCAA",6,1.49,NA,NA,NA,NA,NA,NA,"stop","W23* F126W A145E",3
"lib2","SARS-CoV-2","GTATACACGAATCTGT",1,21.21,6,-4.84,1.41,1.5,1.09,0.01,"1 nonsynonymous","Y178P",1
"lib2","SARS-CoV-2","GTATACACGACCCGGT",2,19.8,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C31Q L95V N157Y A190L",4
"lib2","SARS-CoV-2","GTATACACGAGCGGTT",2,8.85,7.95,-2.89,0.32,1.61,1.12,0.03,">1 nonsynonymous","N24W P96S",2
"lib2","SARS-CoV-2","GTATACACTTAGCAAA",2,12.87,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V32S L57P G86V Q144L",4
"lib2","SARS-CoV-2","GTATACAGGATAAGCT",10,54.4,7.93,-2.91,0.17,2.29,1.08,0.01,"1 nonsynonymous","Y143D",1
"lib2","SARS-CoV-2","GTATACATATTAACCC",2,1.4,NA,NA,NA,NA,NA,NA,"stop","D34* D90N K114V",3
"lib2","SARS-CoV-2","GTATACATCTTCCCAA",17,88.12,8.46,-2.38,0.08,1.61,1.11,0,">1 nonsynonymous","T3I P161V",2
"lib2","SARS-CoV-2","GTATACATGTAACTTA",8,1.99,NA,NA,NA,NA,NA,NA,"stop","S43Y I72Y P133S G146*",4
"lib2","SARS-CoV-2","GTATACATTATAGTAT",12,58.15,8.91,-1.93,0.11,1.78,1.09,0,">1 nonsynonymous","S19A V77Q",2
"lib2","SARS-CoV-2","GTATACCAAAGTTTTA",11,125.26,8.07,-2.76,0.18,1.5,1.12,0.01,">1 nonsynonymous","F12E I142F",2
"lib2","SARS-CoV-2","GTATACCATGCCCATG",6,78.32,10.62,-0.21,0.04,2.98,1.01,0,">1 nonsynonymous","T3A K26I D90N",3
"lib2","SARS-CoV-2","GTATACCATTAGCTAA",2,49.87,10.22,-0.62,0.04,3,1.01,0,">1 nonsynonymous","P54I P149S F156S",3
"lib2","SARS-CoV-2","GTATACCCAAGTAGAG",7,130.91,10.77,-0.07,0.04,3,1.01,0,">1 nonsynonymous","V37L G83S",2
"lib2","SARS-CoV-2","GTATACCGCGAGATGC",3,7.2,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","E10D Y35L F70V R78H V103N",5
"lib2","SARS-CoV-2","GTATACCGGAGACGCA",1,72.44,9.73,-1.11,0.05,2.83,1.07,0,"1 nonsynonymous","G74K",1
"lib2","SARS-CoV-2","GTATACCTAAAAAACG",2,7.92,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","T55F G101V S113K F160M V181S",5
"lib2","SARS-CoV-2","GTATACCTCTCGAGGG",1,19.94,10.85,0.01,0.07,2.92,1.1,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","GTATACCTTTGATTTA",26,262.74,10.82,-0.02,0.04,2.93,1.08,0,">1 nonsynonymous","C61R Y178H",2
"lib2","SARS-CoV-2","GTATACGAACCACAGA",7,100.27,10.79,-0.05,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATACGACATCTTGC",5,36.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5E E10W K48M G86N D112E R124A N171G",7
"lib2","SARS-CoV-2","GTATACGACTCTTTTA",1,102.67,10.47,-0.36,0.02,2.9,1.09,0,">1 nonsynonymous","C61Q T100M S129L",3
"lib2","SARS-CoV-2","GTATACGCTAAAAAGG",2,13.61,9.06,-1.78,0.22,1.55,1.15,0.02,">1 nonsynonymous","G86H K199T",2
"lib2","SARS-CoV-2","GTATACGTATTTGCTG",10,126.75,10.38,-0.46,0.03,2.94,1.04,0,">1 nonsynonymous","G9L T46S",2
"lib2","SARS-CoV-2","GTATACTAATTAGAGA",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Q C61N R73K Y91N I104S D112N",6
"lib2","SARS-CoV-2","GTATACTGGATCAGGT",3,18.41,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G9R V103G",2
"lib2","SARS-CoV-2","GTATACTGGCAACTGG",3,55.9,10.7,-0.14,0.08,2.78,1.09,0,">1 nonsynonymous","V37D G174A",2
"lib2","SARS-CoV-2","GTATACTGGCTAATCT",1,31.24,8.81,-2.03,0.15,1.98,1.01,0.01,">1 nonsynonymous","S41E K56V I72C Y91W",4
"lib2","SARS-CoV-2","GTATACTTAGACAAAA",5,8.48,6.21,-4.62,2,3,1.21,0.01,">1 nonsynonymous","L95I I104S D137S C158S",4
"lib2","SARS-CoV-2","GTATAGAAACACGTCG",4,65.84,10.76,-0.08,0.05,2.97,1.05,0,">1 nonsynonymous","P7K Y35V",2
"lib2","SARS-CoV-2","GTATAGAAGCAACGGA",2,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K D137L Y175H",3
"lib2","SARS-CoV-2","GTATAGAATCATTATT",7,65.94,8.24,-2.59,0.25,1.5,1.14,0.04,">1 nonsynonymous","F44A L57V V71L",3
"lib2","SARS-CoV-2","GTATAGACGAGGATGA",3,43.73,6,-4.84,2,2.04,1.13,0.01,">1 nonsynonymous","D34S T55A A105T Y159R",4
"lib2","SARS-CoV-2","GTATAGACTGTGATAT",1,7.22,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F47S Q176I",2
"lib2","SARS-CoV-2","GTATAGATTATATATT",3,63.61,9.34,-1.49,0.13,1.82,1.07,0.01,">1 nonsynonymous","K48N S69W F126L",3
"lib2","SARS-CoV-2","GTATAGCAAGTATAAA",11,6.07,NA,NA,NA,NA,NA,NA,"stop","R25H D98* E141M S184R",4
"lib2","SARS-CoV-2","GTATAGCAATTCACTG",1,0,NA,NA,NA,NA,NA,NA,"stop","N118R F134I Y175*",3
"lib2","SARS-CoV-2","GTATAGCACGAGGCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S D98V F99S T201V",4
"lib2","SARS-CoV-2","GTATAGCACGCAAATA",4,40.06,9.32,-1.52,0.09,2.39,1.06,0,">1 nonsynonymous","W106K F156L K199N",3
"lib2","SARS-CoV-2","GTATAGCAGTTATTAT",1,16.61,10.9,0.06,0.09,2.93,1.02,0,"1 nonsynonymous","P197G",1
"lib2","SARS-CoV-2","GTATAGCCAGCATGCA",2,22.17,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y93P F99D L111R Y159G K199N",5
"lib2","SARS-CoV-2","GTATAGCTATCAATAT",2,1.34,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","GTATAGGAATTCTTAA",1,14.06,10.31,-0.53,0.09,2.92,1.03,0,">1 nonsynonymous","S43L L60P",2
"lib2","SARS-CoV-2","GTATAGGTACTGCCTT",9,107.08,6,-4.83,0.53,1.5,1.13,0.01,">1 nonsynonymous","L38H F44T Y119E",3
"lib2","SARS-CoV-2","GTATAGTAAACGCTAA",26,408.11,10.69,-0.14,0.02,2.96,1.04,0,">1 nonsynonymous","S41L K128H",2
"lib2","SARS-CoV-2","GTATAGTACACCCTCG",1,75.73,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56N A89N D98S R136E G155Y Q176R",6
"lib2","SARS-CoV-2","GTATAGTGGAAGATAA",6,51.05,7.08,-3.75,0.35,1.5,1.19,0.03,">1 nonsynonymous","L38Y W106L S129V",3
"lib2","SARS-CoV-2","GTATATAAAAAGATTA",9,73.34,6.44,-4.4,0.58,1.5,1.18,0.03,">1 nonsynonymous","F12I S19G V37S F99S",4
"lib2","SARS-CoV-2","GTATATAAAACTATAC",13,77.17,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","G9K T15V V20H K87N Q176S F185H",6
"lib2","SARS-CoV-2","GTATATAAATAACCTA",5,30.82,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","F8V C49L A89S R124S",4
"lib2","SARS-CoV-2","GTATATAACCATATAG",2,32.38,10.61,-0.22,0.05,2.87,1.03,0,"1 nonsynonymous","S41W",1
"lib2","SARS-CoV-2","GTATATAACTATAAAG",3,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138N E154L K198G",3
"lib2","SARS-CoV-2","GTATATAAGCGAAAGC",17,3.89,NA,NA,NA,NA,NA,NA,"stop","S41Y Q84* Y91R",3
"lib2","SARS-CoV-2","GTATATACAAGTCAAA",9,79.29,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6T K56M D68E G86I G116H F185V",6
"lib2","SARS-CoV-2","GTATATACAGAGAGAA",5,95.67,10.91,0.07,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATATACGAAATAAT",4,31,6,-4.84,2,3,1.13,0,"1 nonsynonymous","D68P",1
"lib2","SARS-CoV-2","GTATATACGACACCAT",5,64.34,9.28,-1.55,0.07,2.64,1.11,0,">1 nonsynonymous","S29K C61H N118Y P149D",4
"lib2","SARS-CoV-2","GTATATACTCTAACGT",2,40.79,10.54,-0.3,0.06,2.96,1.08,0,"1 nonsynonymous","S164V",1
"lib2","SARS-CoV-2","GTATATAGACGCACGT",7,15.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16W V181K",2
"lib2","SARS-CoV-2","GTATATAGCGAATAAT",4,8.23,6,-4.84,1.55,3,1.29,0.04,">1 nonsynonymous","T15F D137S",2
"lib2","SARS-CoV-2","GTATATAGTGCTTCAG",3,33.98,10.89,0.05,0.1,2.88,1.11,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTATATATATCTCTAT",6,23.73,6,-4.84,1.46,1.5,1.14,0.02,">1 nonsynonymous","C31H F47D N92P P161R",4
"lib2","SARS-CoV-2","GTATATATCAGCGGGA",2,8.53,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N92V Y121S",2
"lib2","SARS-CoV-2","GTATATATGACTGAAA",8,82.33,10.84,0.01,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATATATGCCAATAA",1,3.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","GTATATATTTACAACT",8,81.66,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25S S41T C61W D98I K114V",5
"lib2","SARS-CoV-2","GTATATCAATTATAAT",1,37.85,10.24,-0.6,0.03,2.87,1.06,0,">1 nonsynonymous","L5G E76D T100S T201W",4
"lib2","SARS-CoV-2","GTATATCAATTCTAGC",7,114.05,6.15,-4.69,0.83,1.5,1.21,0.02,">1 nonsynonymous","D75V Y143S",2
"lib2","SARS-CoV-2","GTATATCATCATCTTT",1,35.08,10.84,0,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATATCATGAAAAGA",7,213.49,10.61,-0.22,0.04,2.94,1.05,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","GTATATCCAAAACAGA",3,5.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S G117P E135R",3
"lib2","SARS-CoV-2","GTATATCCATAATAAG",13,5.84,NA,NA,NA,NA,NA,NA,"stop","Q84V Y178S T201*",3
"lib2","SARS-CoV-2","GTATATCCGAGCAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L I80L G117M E141D",4
"lib2","SARS-CoV-2","GTATATCCGTAGCTAC",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N L125N L183G",3
"lib2","SARS-CoV-2","GTATATCGCTTTGCTT",4,46.58,8.04,-2.8,0.11,1.73,1.06,0.01,">1 nonsynonymous","I142S Y178L",2
"lib2","SARS-CoV-2","GTATATCTCAAAAAAT",11,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V N120S G146R C158L",4
"lib2","SARS-CoV-2","GTATATCTCCGATGAT",4,16.91,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6D T100G W106P P149T",4
"lib2","SARS-CoV-2","GTATATCTCGATAATT",18,140.19,6,-4.84,0.63,1.5,1.1,0,">1 nonsynonymous","F17R S36L S43M I80M P96R P149V P161I",7
"lib2","SARS-CoV-2","GTATATGAACGGATAC",2,0.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M K87S G101D T201Q",4
"lib2","SARS-CoV-2","GTATATGGAAAAACCT",2,19.21,10.96,0.13,0.1,3,1,0,">1 nonsynonymous","K48N N130R",2
"lib2","SARS-CoV-2","GTATATGTCCCTGCAC",2,1.59,NA,NA,NA,NA,NA,NA,"stop","G51N F156*",2
"lib2","SARS-CoV-2","GTATATGTTAAGTTAC",4,17.57,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T55I G83T I104G S184M",4
"lib2","SARS-CoV-2","GTATATTACACCGCGC",13,128.94,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","S43R F62M D97P N120S E135P",5
"lib2","SARS-CoV-2","GTATATTACATACATA",4,68.01,10.83,-0.01,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATATTATGGACATT",2,3.24,NA,NA,NA,NA,NA,NA,"stop","K26T A89D N118*",3
"lib2","SARS-CoV-2","GTATATTCCACGACTG",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V T46G N58F G83F T170R G174V",6
"lib2","SARS-CoV-2","GTATATTCCCTAATAA",3,75.73,10.51,-0.33,0.03,2.93,1.06,0,">1 nonsynonymous","T55Y C61P G83R Y178F",4
"lib2","SARS-CoV-2","GTATATTGACTTTCGA",3,60.17,9.07,-1.76,0.14,1.5,1.06,0.01,">1 nonsynonymous","N58V S129L V181L",3
"lib2","SARS-CoV-2","GTATATTGCTAAGATG",10,169.73,9.85,-0.98,0.05,2.26,1.02,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","GTATATTGTTCCCAAT",8,12.48,NA,NA,NA,NA,NA,NA,"stop","C6Y V20Y A81L Y119* Q144V",5
"lib2","SARS-CoV-2","GTATATTTCTAAGCTT",6,176.23,10.89,0.05,0.05,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATATTTGTGCTGCA",4,89.25,9.86,-0.98,0.09,2.39,1.05,0,">1 nonsynonymous","G9R D34F T193V",3
"lib2","SARS-CoV-2","GTATCAAAAGGTGTTT",9,10.16,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41I V103P G146M G152H P177S",5
"lib2","SARS-CoV-2","GTATCAAAATGCCTAA",21,117.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I104R L111S",2
"lib2","SARS-CoV-2","GTATCAAACACCGTAG",6,41.39,7.2,-3.63,0.3,1.5,1.01,0.04,">1 nonsynonymous","V77L K94R N120F R127S G174W",5
"lib2","SARS-CoV-2","GTATCAAAGAATCTAT",16,240.33,10.49,-0.35,0.05,2.89,1.08,0,">1 nonsynonymous","N120S Q168S",2
"lib2","SARS-CoV-2","GTATCAAAGCACTCAC",1,59.55,9.9,-0.94,0.1,2.55,1,0,">1 nonsynonymous","F99L V115A",2
"lib2","SARS-CoV-2","GTATCAAATGCAGAAA",6,14.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3F F47W I104L P133C",4
"lib2","SARS-CoV-2","GTATCAACCTCCACTC",13,185.89,10.86,0.02,0.06,2.86,1.13,0,"1 nonsynonymous","T85R",1
"lib2","SARS-CoV-2","GTATCAACGTATAAAC",5,14.62,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V11G A14L L95T L131R Y143W G174V S200T",7
"lib2","SARS-CoV-2","GTATCAAGATCCCGTA",4,85.76,9.98,-0.85,0.1,2.46,1.03,0,">1 nonsynonymous","L60P D97W",2
"lib2","SARS-CoV-2","GTATCAAGGGACTCAG",5,12.9,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","F44C A105E C150Y",3
"lib2","SARS-CoV-2","GTATCAAGTATGTGAT",5,27.25,6.35,-4.49,0.23,2.24,1.11,0,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","GTATCAAGTCCTTATG",6,114.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14E V37A F44C Q79M D112H",5
"lib2","SARS-CoV-2","GTATCAATAAAGGCAT",6,49.17,9.67,-1.16,0.07,1.89,1.07,0,">1 nonsynonymous","K56H F99V",2
"lib2","SARS-CoV-2","GTATCAATAGCAACAC",1,8.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N4S V77R Y91T",3
"lib2","SARS-CoV-2","GTATCAATATCGCTGG",3,64.54,10.89,0.06,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCAATTCCACAAA",2,32.68,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S19I P82F L95V K132C",4
"lib2","SARS-CoV-2","GTATCACACTACAAAT",4,109.91,10.86,0.03,0.06,2.92,1.09,0,">1 nonsynonymous","T15V Q168H",2
"lib2","SARS-CoV-2","GTATCACATTATGGCT",1,17.98,9.2,-1.64,0.06,2.95,1.03,0,">1 nonsynonymous","Y21F E154Y",2
"lib2","SARS-CoV-2","GTATCACCAAAAACAT",1,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105K N118C G146R",3
"lib2","SARS-CoV-2","GTATCACCATTTCCTG",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R F47V G74K Y93D S129I",5
"lib2","SARS-CoV-2","GTATCACCGAAAGAGT",10,240.62,10.26,-0.57,0.03,2.97,1.04,0,"1 nonsynonymous","N109Q",1
"lib2","SARS-CoV-2","GTATCACTCTCTGCCA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","I72K N110* Y143V N157W",4
"lib2","SARS-CoV-2","GTATCAGAAGAGCAAA",4,117.96,10.85,0.01,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCAGACCCGCAAC",4,99.17,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I28M N130T T170I Y175V",4
"lib2","SARS-CoV-2","GTATCAGCAGTGTATG",6,26.1,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","G166I V180S T201K",3
"lib2","SARS-CoV-2","GTATCAGCATCACCTG",6,130.34,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C31S P149L Y175I T201I",4
"lib2","SARS-CoV-2","GTATCAGTACGGACAC",2,29.08,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","R73K A81T G86S",3
"lib2","SARS-CoV-2","GTATCATAATCAAAAA",3,11.52,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","K87V V103G K132N Y143S T170F",5
"lib2","SARS-CoV-2","GTATCATCCCATTGTA",2,7.71,8.8,-2.04,0.09,2.88,1.13,0,">1 nonsynonymous","Y21W V37E T63K G117A",4
"lib2","SARS-CoV-2","GTATCATCCTAAACAG",2,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57S T85C C102S K114W",4
"lib2","SARS-CoV-2","GTATCATGAGGATCTG",3,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66W D90T A105H P177V",4
"lib2","SARS-CoV-2","GTATCATTAAATTAAT",1,12.17,9.07,-1.76,0.5,1.79,1.06,0.04,">1 nonsynonymous","Y35Q D59Y K87E",3
"lib2","SARS-CoV-2","GTATCCAAACATCTAG",16,141.9,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L122K T140L G172R",3
"lib2","SARS-CoV-2","GTATCCAAAGAGTCGC",14,1.21,NA,NA,NA,NA,NA,NA,"stop","L38I T55Y T63L N120* K132W I138L K198Q",7
"lib2","SARS-CoV-2","GTATCCATATTTCAAA",4,33.19,10.89,0.06,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCCATCGGAACAA",3,15.09,8.99,-1.85,0.19,1.91,1.05,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","GTATCCATGCTGCAGT",17,263.87,10.86,0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCCATTCATAAAA",6,58.92,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G9F N64L Y93I Y119I R136Q N151S T170R",7
"lib2","SARS-CoV-2","GTATCCCACATTAGCA",6,138.13,10.84,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCCCATAAAAAGC",15,119.77,10.55,-0.29,0.04,2.95,1.05,0,">1 nonsynonymous","F8M R16A",2
"lib2","SARS-CoV-2","GTATCCCGGGAGTGCT",2,22.77,6,-4.84,0.67,3,1.2,0.01,">1 nonsynonymous","L60R L162A T201L",3
"lib2","SARS-CoV-2","GTATCCCTAGTGAATT",2,9.36,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","E76R Q176P",2
"lib2","SARS-CoV-2","GTATCCCTTATTACAC",1,8.58,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S29E F70S K114G K128S",4
"lib2","SARS-CoV-2","GTATCCGAAACATATA",6,49.81,9.26,-1.57,0.05,2.76,1.09,0,">1 nonsynonymous","N40R V77M Y119R",3
"lib2","SARS-CoV-2","GTATCCGCTCACGAGA",12,81.77,9.62,-1.21,0.12,1.92,1.1,0.01,">1 nonsynonymous","T15V R136W",2
"lib2","SARS-CoV-2","GTATCCGTATGCCCTA",5,62.65,10.28,-0.55,0.03,2.92,1.09,0,"1 nonsynonymous","Q168N",1
"lib2","SARS-CoV-2","GTATCCGTTGACACCC",12,210.98,10.21,-0.63,0.03,2.77,1,0,">1 nonsynonymous","G9A Y93F",2
"lib2","SARS-CoV-2","GTATCCTAATCACTAG",5,1.58,NA,NA,NA,NA,NA,NA,"stop","I88C S129* C150Y",3
"lib2","SARS-CoV-2","GTATCCTACGCTCTGC",6,21.64,10.84,0,0.08,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCCTGTATATCTT",4,26.94,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S41E V71E I104L G116L E135T",5
"lib2","SARS-CoV-2","GTATCCTTAACAGAAA",2,32.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131F L183V",2
"lib2","SARS-CoV-2","GTATCCTTAACCAAAG",7,14.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V20Y V77K D98K V103K N107A Y159R Q168H",7
"lib2","SARS-CoV-2","GTATCGACCAGAGTAA",5,5.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8Y N13V A81K D90Y I104L Y119G C158P",7
"lib2","SARS-CoV-2","GTATCGACCCAATATA",1,14.42,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","C6T V11N Y50S",3
"lib2","SARS-CoV-2","GTATCGACCGAAATTT",1,30.22,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C61I E135V Q168K G172Q",4
"lib2","SARS-CoV-2","GTATCGAGTAAAAAGC",10,69.81,10.06,-0.77,0.1,2.41,1.05,0,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","GTATCGATAAGTACGA",1,48.38,10.69,-0.14,0.07,2.88,1.11,0,">1 nonsynonymous","A145V E154A",2
"lib2","SARS-CoV-2","GTATCGATATATAGGA",14,419.57,9.97,-0.87,0.02,2.97,1.04,0,">1 nonsynonymous","K87Q L122Y",2
"lib2","SARS-CoV-2","GTATCGATATTACCTG",2,6.31,10.96,0.12,0.09,2.99,1.03,0,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","GTATCGCACACTCCAC",13,150.31,7.58,-3.26,0.19,1.5,1.1,0.01,">1 nonsynonymous","L38P S139V G146S",3
"lib2","SARS-CoV-2","GTATCGGCTAACCAAT",6,23.86,6,-4.84,1.19,1.5,1.03,0.02,">1 nonsynonymous","C6L R127V F185C C195M",4
"lib2","SARS-CoV-2","GTATCGGGTGGAAATT",7,141.57,10.27,-0.57,0.04,2.9,1.09,0,"1 nonsynonymous","G174Y",1
"lib2","SARS-CoV-2","GTATCGGTTAAATTAT",4,9.08,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V11F V52L L57Y C102R T201C",5
"lib2","SARS-CoV-2","GTATCGTATCAAGAAG",6,5.38,NA,NA,NA,NA,NA,NA,"stop","V77* I104R R127D C158Y P197D",5
"lib2","SARS-CoV-2","GTATCGTCTATCCAAG",10,101.91,10.38,-0.46,0.04,2.86,1.05,0,">1 nonsynonymous","S41E S45A L183I",3
"lib2","SARS-CoV-2","GTATCTAAAATATATT",2,42.41,8.29,-2.55,0.17,2.34,1.07,0.01,">1 nonsynonymous","A18T C61T Y119C",3
"lib2","SARS-CoV-2","GTATCTAACTGAAAAA",7,116.79,10.27,-0.56,0.03,2.9,1.04,0,">1 nonsynonymous","L122E V173H L183F T201C",4
"lib2","SARS-CoV-2","GTATCTAACTGTCAGC",4,46.94,10.3,-0.54,0.06,2.9,1.04,0,">1 nonsynonymous","F12I N24V N130A",3
"lib2","SARS-CoV-2","GTATCTAAGTAATTAA",5,228.93,9.8,-1.04,0.06,2.15,1.06,0,">1 nonsynonymous","A81V T140G",2
"lib2","SARS-CoV-2","GTATCTACAAATATCG",7,182.52,8.32,-2.52,0.11,2.92,1.04,0,"1 nonsynonymous","N171D",1
"lib2","SARS-CoV-2","GTATCTACTTCCAAGC",5,38.56,9.75,-1.08,0.14,2.05,1.02,0.01,">1 nonsynonymous","I2A T15M A22D A81K",4
"lib2","SARS-CoV-2","GTATCTAGTGGCTGTC",1,19.85,10.07,-0.77,0.11,3,1,0.01,"1 nonsynonymous","S164I",1
"lib2","SARS-CoV-2","GTATCTAGTTAAGTCT",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24T D68E N92T P169S",4
"lib2","SARS-CoV-2","GTATCTATAAACACTA",5,77.86,10.2,-0.64,0.06,2.78,1.08,0,">1 nonsynonymous","N4D G83S E141I",3
"lib2","SARS-CoV-2","GTATCTATGATTCACA",3,35.7,8.69,-2.14,0.14,1.8,1.13,0.01,">1 nonsynonymous","C31I S53P V115R P169Q",4
"lib2","SARS-CoV-2","GTATCTATTGGATAGT",5,37.2,10.26,-0.57,0.05,3,1.02,0,">1 nonsynonymous","C61E K87L N151Y",3
"lib2","SARS-CoV-2","GTATCTCTACATAGAA",9,3.21,NA,NA,NA,NA,NA,NA,"stop","E10C T15E N24* K114Y",4
"lib2","SARS-CoV-2","GTATCTGAACCTGAAC",11,19.57,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15Q Y35L F99A R136V P149L G174L",6
"lib2","SARS-CoV-2","GTATCTGATATACGGC",1,24.7,6.08,-4.76,1.48,1.5,1.13,0.03,">1 nonsynonymous","E10M C49N Q144F",3
"lib2","SARS-CoV-2","GTATCTGGCCTTCCTA",4,35.7,10.11,-0.73,0.06,2.2,1.02,0,"1 nonsynonymous","L95T",1
"lib2","SARS-CoV-2","GTATCTGGCTAATCTT",14,126.06,10.89,0.06,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATCTGGGATCGACA",6,45.87,9.71,-1.13,0.16,1.83,1.06,0.01,">1 nonsynonymous","T3K P82K",2
"lib2","SARS-CoV-2","GTATCTGTCTTACTGC",2,24.24,8.93,-1.91,0.1,2.03,1.06,0,">1 nonsynonymous","L57S S129R G152D F160G",4
"lib2","SARS-CoV-2","GTATCTGTGGTCGCAA",6,25.36,6,-4.84,1.31,1.5,1.13,0.02,">1 nonsynonymous","W106V N157R",2
"lib2","SARS-CoV-2","GTATCTGTTTGGATCA",3,26.39,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G74L F99R",2
"lib2","SARS-CoV-2","GTATGAAAACCTACAC",1,6.89,7.87,-2.97,1.1,1.5,1.17,0.06,">1 nonsynonymous","S53L L162W",2
"lib2","SARS-CoV-2","GTATGAAAACGCGTCA",5,110.37,9.98,-0.86,0.08,2.36,1.07,0,">1 nonsynonymous","S36F E135S",2
"lib2","SARS-CoV-2","GTATGAAAACTGAAGT",6,61.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19P Q84N V103I Y165E A190D",5
"lib2","SARS-CoV-2","GTATGAAAACTTCTCT",3,112.72,8.63,-2.2,0.08,2.89,1.09,0,">1 nonsynonymous","G9F T140R N157H",3
"lib2","SARS-CoV-2","GTATGAAACCGTTTCC",18,7.17,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","GTATGAAAGCACCCAC",2,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E D34N S41L N107L D112C",5
"lib2","SARS-CoV-2","GTATGAAAGGTGAGTG",1,22.48,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","GTATGAAAGTTTAGAA",4,32.6,8.2,-2.64,0.26,1.5,1.01,0.04,">1 nonsynonymous","A33T D137H A192W",3
"lib2","SARS-CoV-2","GTATGAAATCTCGAAA",10,30.8,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","L95H",1
"lib2","SARS-CoV-2","GTATGAACCTCAATGC",24,281.48,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y91I L125E P161E",3
"lib2","SARS-CoV-2","GTATGAACGAACTTTG",5,46.07,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","S113L K132Y I138Y",3
"lib2","SARS-CoV-2","GTATGAAGAATCTAGA",11,276.73,10.85,0.02,0.03,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGAAGACGCACAT",3,36.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G83D G86Y D112L I142Q P169F",5
"lib2","SARS-CoV-2","GTATGAAGGCGCGCGA",5,35.81,6.39,-4.44,0.18,1.83,1.08,0,">1 nonsynonymous","P82R F99R E135N A190S",4
"lib2","SARS-CoV-2","GTATGAAGGGGATGAA",12,132.26,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","E10Y A67G T100N D112T C195R",5
"lib2","SARS-CoV-2","GTATGAAGTAAAACTA",6,67.6,10.55,-0.29,0.05,2.92,1.1,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","GTATGACCTGATAGCT",1,7,7.74,-3.09,0.4,1.5,1.14,0.04,">1 nonsynonymous","G86T P191S",2
"lib2","SARS-CoV-2","GTATGACGAAAACAAC",4,41.05,6,-4.84,2,3,1.11,0,">1 nonsynonymous","P7Y A42G C61L G101V W106Q Y121R",6
"lib2","SARS-CoV-2","GTATGACGCAGCTGGA",7,74.62,10.8,-0.04,0.07,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGACTGAATTGAG",3,23.58,10.77,-0.07,0.06,2.93,1.05,0,">1 nonsynonymous","G83Y H189R",2
"lib2","SARS-CoV-2","GTATGAGAAGTACAAT",2,46.88,10.84,0,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGAGACTGCTACC",7,122.09,6,-4.84,1.73,1.5,1.12,0.01,">1 nonsynonymous","N107S P161C",2
"lib2","SARS-CoV-2","GTATGAGGTCTCAGAA",8,141.91,10.8,-0.03,0.04,2.98,1.04,0,">1 nonsynonymous","P7R A190E",2
"lib2","SARS-CoV-2","GTATGATATTTTCGCC",7,174.22,10.72,-0.12,0.02,2.93,1.08,0,">1 nonsynonymous","Y39L D90H",2
"lib2","SARS-CoV-2","GTATGATTCGATATGG",9,400.21,10.69,-0.15,0.02,2.91,1.07,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","GTATGATTCTAGGAAA",5,31.67,8.96,-1.88,0.16,1.5,1.09,0.01,">1 nonsynonymous","F44L G83V V173G",3
"lib2","SARS-CoV-2","GTATGATTGAACGACC",1,13.93,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","D68E D90F F99H Y123T F160C",5
"lib2","SARS-CoV-2","GTATGCAAAGTCTTAA",1,30.16,10.84,0,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGCAACGTAATTA",10,9.76,NA,NA,NA,NA,NA,NA,"stop","L38I N107F L122*",3
"lib2","SARS-CoV-2","GTATGCAATACAAGCT",11,3.44,NA,NA,NA,NA,NA,NA,"stop","N92* C150Y",2
"lib2","SARS-CoV-2","GTATGCAATTCCCGAT",2,22.37,10.7,-0.14,0.09,2.87,1.11,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GTATGCACACTATACT",2,29.38,9.13,-1.71,0.13,2.29,1.07,0.01,">1 nonsynonymous","G83I K87S S129T T148I",4
"lib2","SARS-CoV-2","GTATGCACTTATTAAG",6,70.45,8.71,-2.13,0.12,2.78,1.12,0.01,">1 nonsynonymous","G117V G174P",2
"lib2","SARS-CoV-2","GTATGCATATTACTCC",1,17.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","GTATGCATGTCGACAA",10,95.86,9.24,-1.59,0.04,2.96,1.07,0,">1 nonsynonymous","Y143L G174P K198G",3
"lib2","SARS-CoV-2","GTATGCATTAATTGCA",3,53.39,10.66,-0.18,0.09,2.87,1.08,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","GTATGCCAAAAATCTG",26,363.23,9.1,-1.74,0.04,2.47,1.07,0,">1 nonsynonymous","R73L P149S",2
"lib2","SARS-CoV-2","GTATGCCATAAGAACC",11,3.33,NA,NA,NA,NA,NA,NA,"stop","T85* Y119R S139V",3
"lib2","SARS-CoV-2","GTATGCCGACCCACTA",2,0.33,NA,NA,NA,NA,NA,NA,"stop","C49H Y50* C102Q T201M",4
"lib2","SARS-CoV-2","GTATGCCGACTGAAAA",3,12.63,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Q79H P96H W106L S139G",4
"lib2","SARS-CoV-2","GTATGCCGGCTCGTAA",6,38.9,8.97,-1.87,0.09,2.22,1.04,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","GTATGCCGTCTTTAAA",6,69.59,9.49,-1.35,0.09,1.97,1.06,0,">1 nonsynonymous","W23G Y175W",2
"lib2","SARS-CoV-2","GTATGCCTAAAGATTC",5,26.96,8.08,-2.76,0.31,1.5,1.08,0.04,">1 nonsynonymous","R25S I138Y P149L",3
"lib2","SARS-CoV-2","GTATGCGAAAATAAAA",1,52,6,-4.84,2,1.5,1.22,0.01,"1 nonsynonymous","P177R",1
"lib2","SARS-CoV-2","GTATGCGGCATATCAC",4,65.2,6.78,-4.06,0.43,1.5,1.12,0.03,">1 nonsynonymous","K87T L95I N107M G116L",4
"lib2","SARS-CoV-2","GTATGCGGGGACACTA",3,11.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44I N92H N157V",3
"lib2","SARS-CoV-2","GTATGCTAAACGATCT",3,36.82,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G9L L60S C61Y D90M L122Q L131E N157L",7
"lib2","SARS-CoV-2","GTATGCTAGCCATGGC",1,62.43,10.67,-0.17,0.06,2.93,1.08,0,">1 nonsynonymous","S41W I138N",2
"lib2","SARS-CoV-2","GTATGCTATAGTGTCA",10,60.36,10.61,-0.22,0.03,2.98,1.01,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","GTATGCTATATATACG",8,55.45,10.71,-0.13,0.06,2.92,1.06,0,"1 nonsynonymous","A42V",1
"lib2","SARS-CoV-2","GTATGCTCATCTTGAG",9,134.29,9.16,-1.68,0.05,2.92,1.1,0,">1 nonsynonymous","T100I T170L L188R",3
"lib2","SARS-CoV-2","GTATGCTCATTATTTG",20,249.91,6,-4.84,1.87,1.5,1.17,0.01,">1 nonsynonymous","F47M C150R",2
"lib2","SARS-CoV-2","GTATGCTCGTCCAGAA",11,62.19,10.71,-0.12,0.04,2.93,1.07,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","GTATGCTTGAGACACC",1,25.08,8.17,-2.67,0.13,2.85,1.05,0.01,">1 nonsynonymous","V37L D59S I142A G152P",4
"lib2","SARS-CoV-2","GTATGGAAACAGATAG",13,24.72,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T15M S45C P82F G117L N130S",5
"lib2","SARS-CoV-2","GTATGGAACATCTGCT",16,0.35,NA,NA,NA,NA,NA,NA,"stop","R16* F62Y G86M S113A",4
"lib2","SARS-CoV-2","GTATGGAAGTGACGTT",9,23.97,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6F T63W N151V G155V",4
"lib2","SARS-CoV-2","GTATGGAGCTTACTAA",1,0.68,NA,NA,NA,NA,NA,NA,"stop","N120* K199I",2
"lib2","SARS-CoV-2","GTATGGAGGACATGAA",4,0.18,NA,NA,NA,NA,NA,NA,"stop","K26* Y91T",2
"lib2","SARS-CoV-2","GTATGGCCACTACATG",1,11.79,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","A33R V77R D98Y",3
"lib2","SARS-CoV-2","GTATGGCCGGGAGCCA",11,107.18,8.61,-2.22,0.11,2.22,1.09,0,">1 nonsynonymous","N107H F160H",2
"lib2","SARS-CoV-2","GTATGGCGCTAAAACT",3,73.86,10.55,-0.29,0.03,3,1.02,0,">1 nonsynonymous","K87T K198D",2
"lib2","SARS-CoV-2","GTATGGCTAGAACCGT",1,0.76,NA,NA,NA,NA,NA,NA,"stop","G83Y P96* A105V N120V",4
"lib2","SARS-CoV-2","GTATGGCTAGGTTGCT",5,125.86,10.81,-0.03,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGGGCCGCATCCG",2,6.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G F62P S113R E154Y S200Q",5
"lib2","SARS-CoV-2","GTATGGGTTACCCCAT",7,148.39,9.32,-1.51,0.08,2.37,1.08,0,">1 nonsynonymous","A42S P133M F156Y",3
"lib2","SARS-CoV-2","GTATGGTGAGAGGGAA",3,101.23,10.85,0.01,0.04,2.94,1.05,0,">1 nonsynonymous","T55I N64K K132N Q168H",4
"lib2","SARS-CoV-2","GTATGGTGGCAGAAAT",9,148.4,10.02,-0.81,0.07,2.26,1.04,0,">1 nonsynonymous","V52N Y66L",2
"lib2","SARS-CoV-2","GTATGGTGGTAAGGTC",6,116.59,10.1,-0.74,0.07,2.54,1.03,0,">1 nonsynonymous","E10L V180C",2
"lib2","SARS-CoV-2","GTATGTAAGGAAGTTA",1,23.25,10.84,0.01,0.1,2.83,1.18,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTATGTAGAAAAAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A14Y A81N D90W T100* V173T",5
"lib2","SARS-CoV-2","GTATGTATACGCCTTC",1,8.37,10.24,-0.6,0.17,2.67,1.06,0.01,">1 nonsynonymous","D98G L183F",2
"lib2","SARS-CoV-2","GTATGTATAGAAAGTT",17,159.61,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L5M D68I V77S D90I G155T H189R",6
"lib2","SARS-CoV-2","GTATGTCAAGAATGAA",9,100.62,9.31,-1.53,0.07,2.64,1.05,0,">1 nonsynonymous","A42K F47L Y91N G166S",4
"lib2","SARS-CoV-2","GTATGTCACAACAGAT",5,21.29,6,-4.84,2,3,1.19,0.03,">1 nonsynonymous","K87G F99T L122S N157R",4
"lib2","SARS-CoV-2","GTATGTCATGTGATTG",3,31.74,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D98S S113L E135T",3
"lib2","SARS-CoV-2","GTATGTCCAATATGGA",2,24.24,10.5,-0.33,0.06,2.9,1.11,0,">1 nonsynonymous","R78T K114R F160L",3
"lib2","SARS-CoV-2","GTATGTCGCCAAGAAT",6,142.42,10.31,-0.53,0.04,2.96,1.03,0,"1 nonsynonymous","K87G",1
"lib2","SARS-CoV-2","GTATGTCTGCTACGAA",1,14.6,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","E154S R179M",2
"lib2","SARS-CoV-2","GTATGTCTTTACTGAC",9,26.71,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C49K G117H R136M N171I",4
"lib2","SARS-CoV-2","GTATGTGAACATAAAA",1,6.26,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I104N L131W T170H",3
"lib2","SARS-CoV-2","GTATGTGAAGCAAACT",5,64.85,9.86,-0.97,0.04,2.94,1.09,0,"1 nonsynonymous","G74Q",1
"lib2","SARS-CoV-2","GTATGTGAAGGCTATC",13,135.43,10.09,-0.74,0.06,2.76,1.02,0,">1 nonsynonymous","I2T E10G S36I",3
"lib2","SARS-CoV-2","GTATGTGAGCGATGAC",5,77.95,9.89,-0.95,0.08,2.18,1.03,0,">1 nonsynonymous","N13F L183M",2
"lib2","SARS-CoV-2","GTATGTGCTCTCTATC",8,65.44,8.21,-2.62,0.2,1.74,1.15,0.01,"1 nonsynonymous","F126P",1
"lib2","SARS-CoV-2","GTATGTGGACAAATCG",7,66.06,6,-4.84,1.57,1.5,1.14,0.02,">1 nonsynonymous","P82G D90L P149F",3
"lib2","SARS-CoV-2","GTATGTTAACACGTAT",3,198.15,10.85,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGTTGACTGATTG",2,11.26,6,-4.84,1.25,3,1.28,0.01,">1 nonsynonymous","L38G E76A F126L",3
"lib2","SARS-CoV-2","GTATGTTGGACATAGA",18,112.61,6,-4.84,0.57,1.5,1.12,0,">1 nonsynonymous","N40M K56H C150S",3
"lib2","SARS-CoV-2","GTATGTTGTTTAGACG",12,110.95,10.83,-0.01,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATGTTTAATTAAGA",16,173.1,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37L D68A R124C G174P",4
"lib2","SARS-CoV-2","GTATGTTTACCAAGAC",3,54.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V65L C158Y S184W",3
"lib2","SARS-CoV-2","GTATGTTTAGTAAGAA",11,142.32,10.31,-0.53,0.04,2.83,1.05,0,"1 nonsynonymous","P133D",1
"lib2","SARS-CoV-2","GTATGTTTCGATCAAT",5,58.89,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R27P F99P P161Y P169L",4
"lib2","SARS-CoV-2","GTATTAAAAACGACCG",8,0.2,NA,NA,NA,NA,NA,NA,"stop","F12D V77E A105L S129* T140M F160N",6
"lib2","SARS-CoV-2","GTATTAAAAAGCTTGT",1,15.63,10.33,-0.51,0.17,2.57,1.2,0.02,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","GTATTAAACACTTTAA",1,26.36,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F8K G172T",2
"lib2","SARS-CoV-2","GTATTAAAGATTAAAT",7,212.6,8.98,-1.86,0.1,1.66,1.08,0,">1 nonsynonymous","N4L T55M T63S S69T P161V K199S",6
"lib2","SARS-CoV-2","GTATTAAAGGCTTCAA",4,62.58,8.61,-2.23,0.17,1.51,1.11,0.01,"1 nonsynonymous","S19V",1
"lib2","SARS-CoV-2","GTATTAAAGTTTCATG",3,38.45,10.25,-0.59,0.09,2.8,1,0,">1 nonsynonymous","A14G V37Q C61I H189V",4
"lib2","SARS-CoV-2","GTATTAACCATATGAA",2,9.44,10.75,-0.08,0.41,2.37,1,0.05,">1 nonsynonymous","Y123V N157S",2
"lib2","SARS-CoV-2","GTATTAACCTGCGTAC",13,653.21,6,-4.84,1.34,1.5,1.13,0.01,">1 nonsynonymous","S43M D90G F99V",3
"lib2","SARS-CoV-2","GTATTAACTACCTGCA",5,67.07,10.8,-0.04,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTAAGACTCAGCA",3,33.87,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S19A Y35V T63H D90Y W106F L162G",6
"lib2","SARS-CoV-2","GTATTAATAATCAATT",3,100.08,10.69,-0.15,0.04,2.98,1.04,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","GTATTAATATCAACAA",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S A81G G155S",3
"lib2","SARS-CoV-2","GTATTAATTGCTCCCA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W A105V",2
"lib2","SARS-CoV-2","GTATTACAAAAAGAAT",6,97.76,9.9,-0.93,0.08,2.38,1.07,0,">1 nonsynonymous","P7S T46S R127A",3
"lib2","SARS-CoV-2","GTATTACACGCCCTAA",3,10.09,10.81,-0.02,0.11,2.69,1.26,0.01,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","GTATTACATTATGCCA",1,28.14,10.71,-0.13,0.11,2.88,1.12,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTATTACCATGATGTT",3,10.99,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T3P V37Y N120C D137R E186V",5
"lib2","SARS-CoV-2","GTATTACCGCATTATT",5,57.53,10.53,-0.3,0.04,3,1,0,">1 nonsynonymous","V37C N110P",2
"lib2","SARS-CoV-2","GTATTACGCGTAAGGT",3,26.86,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y50T D90L F99W G146R",4
"lib2","SARS-CoV-2","GTATTACGCTCTCGTC",1,22.73,9.11,-1.73,0.16,1.95,1.2,0.01,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","GTATTACGGACCCTTT",10,69.16,10.82,-0.01,0.04,2.92,1.08,0,">1 nonsynonymous","L122T F160R",2
"lib2","SARS-CoV-2","GTATTAGACCCACATA",17,423.09,9.73,-1.11,0.03,2.86,1.04,0,">1 nonsynonymous","G83E N130H E154V",3
"lib2","SARS-CoV-2","GTATTAGACTAAGATG",1,15.87,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A33F D90F N107L T170M",4
"lib2","SARS-CoV-2","GTATTAGATACAGAAA",7,127.03,10.59,-0.24,0.04,2.95,1.05,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GTATTAGCATTTGCAC",11,128.75,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D34G N92S C158N",3
"lib2","SARS-CoV-2","GTATTAGCTCAACATG",5,89.64,10.07,-0.76,0.09,2.45,1.03,0,">1 nonsynonymous","L57N D90N S147A",3
"lib2","SARS-CoV-2","GTATTAGGTAATGAAA",1,92.03,10.63,-0.2,0.05,2.93,1.05,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","GTATTATAATTCCGTT",4,79.1,10.22,-0.61,0.03,2.91,1.09,0,">1 nonsynonymous","T148P P149R",2
"lib2","SARS-CoV-2","GTATTATCGCCTAGAT",1,100.96,10.39,-0.45,0.06,2.96,1.04,0,">1 nonsynonymous","G116A N151Y",2
"lib2","SARS-CoV-2","GTATTATGAATACTTT",3,64.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Q84K D112G Y123I Q144P",4
"lib2","SARS-CoV-2","GTATTCAAAAGAAGGA",2,29.31,9.34,-1.5,0.16,1.7,1.06,0.01,">1 nonsynonymous","S69A Y91C",2
"lib2","SARS-CoV-2","GTATTCAAGGACCATT",2,35.02,9.66,-1.18,0.05,2.91,1.07,0,">1 nonsynonymous","L57D T170S",2
"lib2","SARS-CoV-2","GTATTCACCCTAGCGT",4,125.15,10.83,0,0.04,2.95,1.07,0,">1 nonsynonymous","I2R V37G",2
"lib2","SARS-CoV-2","GTATTCACTTATAATA",12,130.39,9.41,-1.43,0.06,2.92,1.08,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","GTATTCATGAGTAAAA",5,65.73,10.19,-0.64,0.04,2.93,1,0,">1 nonsynonymous","C6S S36E",2
"lib2","SARS-CoV-2","GTATTCCAATATCCAC",1,32.41,6.14,-4.69,0.45,1.5,1.15,0.01,">1 nonsynonymous","I104L N110F L131C Y165P",4
"lib2","SARS-CoV-2","GTATTCCAGATTGTTA",16,165.83,10.64,-0.2,0.07,2.84,1.06,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GTATTCCGTGGGCCTA",1,7.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49R S139H Y159M G174R",4
"lib2","SARS-CoV-2","GTATTCCGTTTACCCT",9,226.71,10.68,-0.16,0.04,2.92,1.07,0,">1 nonsynonymous","L122M R136L",2
"lib2","SARS-CoV-2","GTATTCCTAGCTTTTG",8,115.54,10.79,-0.04,0.03,2.95,1.06,0,"1 nonsynonymous","V65L",1
"lib2","SARS-CoV-2","GTATTCCTTAGATTTA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","Q84* P177T",2
"lib2","SARS-CoV-2","GTATTCCTTCCTATAA",2,25.64,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S53I A89H D98H W106S S113D",5
"lib2","SARS-CoV-2","GTATTCCTTTCTTTAC",1,32.84,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L5Y V11A D34Q N58S I80E",5
"lib2","SARS-CoV-2","GTATTCGAATGAGACG",24,172.54,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12V D112V Y119P",3
"lib2","SARS-CoV-2","GTATTCGGTTTACCCA",8,244.07,10.82,-0.02,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTCTAGTACGCCG",1,6.06,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","Y66P N130Y",2
"lib2","SARS-CoV-2","GTATTCTATAAACCTA",1,6.56,7,-3.84,0.42,1.5,1.01,0.04,">1 nonsynonymous","K87I F99N",2
"lib2","SARS-CoV-2","GTATTCTCCCCATTGC",5,46.18,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G51F N64T Y123I S129Y G196L",5
"lib2","SARS-CoV-2","GTATTCTTCGCACCTT",10,47.75,9.76,-1.07,0.18,1.59,1.06,0.02,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","GTATTGAAACTGACTA",12,438.64,9.57,-1.27,0.03,2.91,1.07,0,">1 nonsynonymous","N4G R73A T100K",3
"lib2","SARS-CoV-2","GTATTGAAAGAACCAA",6,50.02,9.22,-1.61,0.1,1.95,1.1,0.01,">1 nonsynonymous","I2T Y121H S129A S139Y",4
"lib2","SARS-CoV-2","GTATTGAAGGCATTCG",16,0.47,NA,NA,NA,NA,NA,NA,"stop","G146*",1
"lib2","SARS-CoV-2","GTATTGACCCTTCTTC",2,14.08,10.8,-0.04,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTGACGACAGTTA",1,20.31,8.21,-2.63,0.42,1.5,1.1,0.07,">1 nonsynonymous","N58L N107I I142A",3
"lib2","SARS-CoV-2","GTATTGACTATTAAAG",7,65.04,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","D68E A105Q N157S",3
"lib2","SARS-CoV-2","GTATTGACTCATCGTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T D112V T201S",3
"lib2","SARS-CoV-2","GTATTGATTCCATTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y R136S",2
"lib2","SARS-CoV-2","GTATTGATTTCACCAG",9,200.09,10.03,-0.8,0.05,2.42,1.05,0,">1 nonsynonymous","T3M Y123T",2
"lib2","SARS-CoV-2","GTATTGCAACTGAGTC",3,27.62,10.67,-0.17,0.05,2.95,1.06,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","GTATTGCAAGTACTAA",3,20.22,8.72,-2.12,0.14,1.78,1.17,0.01,">1 nonsynonymous","R16P F47L F62P T100L I138V",5
"lib2","SARS-CoV-2","GTATTGCACTCGAGTG",1,24.59,10.76,-0.07,0.1,2.81,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","GTATTGCAGGCCGGGG",11,36.38,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T15I A89M N118Y E135A",4
"lib2","SARS-CoV-2","GTATTGCATGTAATCG",2,9.6,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V32P Y39R T46P T85D",4
"lib2","SARS-CoV-2","GTATTGCCAAGAACAG",6,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45K Q84L G152D",3
"lib2","SARS-CoV-2","GTATTGCCTGAAGAGT",2,7.38,6,-4.84,2,3,1.36,0.02,">1 nonsynonymous","N4H V103N",2
"lib2","SARS-CoV-2","GTATTGCCTTTCGTAA",7,3.9,NA,NA,NA,NA,NA,NA,"stop","D34* P96S Y121N",3
"lib2","SARS-CoV-2","GTATTGCGAGACAGAC",3,77.18,10.78,-0.05,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTGGAACAAGATT",5,114.31,8.26,-2.58,0.1,2.19,1.04,0,">1 nonsynonymous","Y66N S113W",2
"lib2","SARS-CoV-2","GTATTGGACTGATAAA",3,58.28,9.27,-1.57,0.06,2.93,1.11,0,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","GTATTGGATCGGTGGC",2,29.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10G V20R C49T",3
"lib2","SARS-CoV-2","GTATTGGCCTTAGTAT",6,219.51,10.26,-0.57,0.03,2.9,1.05,0,">1 nonsynonymous","R16S Q176M",2
"lib2","SARS-CoV-2","GTATTGGCGAAGAAAC",1,0.37,NA,NA,NA,NA,NA,NA,"stop","L5K F12Y R136* S184F",4
"lib2","SARS-CoV-2","GTATTGGGATTAACGT",6,91.94,9.56,-1.28,0.05,1.92,1.07,0,">1 nonsynonymous","F44L T100Q S139Q F160T",4
"lib2","SARS-CoV-2","GTATTGGGGTTGACAA",8,99.96,10.85,0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTGGTTCCACTAA",2,0.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GTATTGTAACTACCCT",5,147.81,10.51,-0.33,0.05,2.91,1.07,0,">1 nonsynonymous","L95M K128Q",2
"lib2","SARS-CoV-2","GTATTGTAATTACCGA",4,25.39,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5E A67T K94D P149Q G155K",5
"lib2","SARS-CoV-2","GTATTGTAGAAAGCGG",2,20.61,10.67,-0.17,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTATTGTCATTTTTAC",5,108.56,9.94,-0.9,0.09,2.11,1.04,0,">1 nonsynonymous","G83M C102L",2
"lib2","SARS-CoV-2","GTATTGTCTTGGTATG",7,25.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58F K94Y I104H",3
"lib2","SARS-CoV-2","GTATTGTTACTGAACT",22,114.17,6.68,-4.15,0.37,1.5,1.16,0.02,">1 nonsynonymous","P7A A67G D97Y",3
"lib2","SARS-CoV-2","GTATTTAAACACCAAC",1,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L V103K",2
"lib2","SARS-CoV-2","GTATTTAACGTCTGCG",7,76.52,6,-4.84,2,1.5,1.24,0.03,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","GTATTTAACTTGATAA",5,32.06,10.73,-0.11,0.05,2.94,1.02,0,">1 nonsynonymous","K114Y T148L P197Q",3
"lib2","SARS-CoV-2","GTATTTACATAACTCA",6,137.49,10.28,-0.56,0.06,2.9,1.08,0,"1 nonsynonymous","F156M",1
"lib2","SARS-CoV-2","GTATTTACTTACAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","I28S L95R Y121*",3
"lib2","SARS-CoV-2","GTATTTAGAACTAATA",6,2.16,NA,NA,NA,NA,NA,NA,"stop","N30* S45* N92A",3
"lib2","SARS-CoV-2","GTATTTAGACATTGAA",2,37.87,9.64,-1.2,0.05,2.93,1.08,0,">1 nonsynonymous","T46V C61Y Q168G",3
"lib2","SARS-CoV-2","GTATTTATTATGGTTA",6,89.79,8.18,-2.65,0.12,2.58,1.06,0.01,">1 nonsynonymous","S53L S129I S139R G166H V173P K198N",6
"lib2","SARS-CoV-2","GTATTTCAAAATTAGA",3,1.79,NA,NA,NA,NA,NA,NA,"stop","A81F C102F R124* F160H T201L",5
"lib2","SARS-CoV-2","GTATTTCACGGCAACC",10,89.15,10.75,-0.09,0.03,2.97,1.04,0,"1 nonsynonymous","N58K",1
"lib2","SARS-CoV-2","GTATTTCAGCACACTC",5,0.84,NA,NA,NA,NA,NA,NA,"stop","A33P G51* P96M",3
"lib2","SARS-CoV-2","GTATTTCATCACCATG",1,19.54,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D112E Y165E A190L",3
"lib2","SARS-CoV-2","GTATTTCCACATTAAT",2,12.97,10.92,0.08,0.08,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","GTATTTCCCAGCTGCC",4,22.22,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F12L G101W P149I",3
"lib2","SARS-CoV-2","GTATTTCGCGGGAACC",5,149.11,10.94,0.1,0.04,2.94,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","GTATTTCGCTCGTACA",3,231.62,10.76,-0.08,0.04,2.97,1.01,0,">1 nonsynonymous","D59N L122T N151Y",3
"lib2","SARS-CoV-2","GTATTTCGTACGAATA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","S41D P82*",2
"lib2","SARS-CoV-2","GTATTTCTATGACAAC",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17D K48Y",2
"lib2","SARS-CoV-2","GTATTTGAAGTAAATC",2,77.44,8.25,-2.59,0.13,2.05,1.03,0.01,">1 nonsynonymous","T55Y Y123R E154V Q176S",4
"lib2","SARS-CoV-2","GTATTTGATGAACCAT",1,9.86,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L95T S108M",2
"lib2","SARS-CoV-2","GTATTTGCTAAAAGCC",5,13.64,10.69,-0.15,0.07,2.9,1.11,0,">1 nonsynonymous","D98S T148N",2
"lib2","SARS-CoV-2","GTATTTGCTACAAACG",8,20.95,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T3R Y91T Y119E I138W",4
"lib2","SARS-CoV-2","GTATTTGTATCCCGAC",4,31.38,10.5,-0.34,0.07,2.78,1.12,0,">1 nonsynonymous","N4K T15L F62L",3
"lib2","SARS-CoV-2","GTATTTGTTCAATAGG",1,9.28,NA,NA,NA,NA,NA,0.29,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","GTATTTTAAGGACAAT",5,1.31,NA,NA,NA,NA,NA,NA,"stop","F8L S43F Y93V F99S P149Q C158* E186F",7
"lib2","SARS-CoV-2","GTATTTTACCTAAGCA",27,349.7,10.86,0.02,0.05,2.92,1.1,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","GTATTTTAGTGAAGTA",7,3.13,NA,NA,NA,NA,NA,NA,"stop","V32* V103D P149F",3
"lib2","SARS-CoV-2","GTATTTTCAGTTCAAA",17,324.45,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I2L F44N C61H Y159K T201L",5
"lib2","SARS-CoV-2","GTATTTTCTAACAATA",7,11.53,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T15R K94Q F99L Y121S E135T R179T",6
"lib2","SARS-CoV-2","GTATTTTGCCACACAG",8,38.63,9.55,-1.28,0.19,1.95,1.01,0.02,">1 nonsynonymous","C6Y N13I",2
"lib2","SARS-CoV-2","GTATTTTTATTGAAAG",8,143.05,10.65,-0.18,0.04,2.95,1.03,0,"1 nonsynonymous","Q144P",1
"lib2","SARS-CoV-2","GTATTTTTCATTAGAA",1,8.01,10.58,-0.26,0.19,2.81,1.13,0.02,">1 nonsynonymous","G9W T15D",2
"lib2","SARS-CoV-2","GTATTTTTCTAGTAAA",7,85.89,9.4,-1.44,0.07,2.08,1.14,0,">1 nonsynonymous","V11S L60S",2
"lib2","SARS-CoV-2","GTCAAAAAAATAAAGA",1,11.12,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","A81D S147W N157T Y175A P191S",5
"lib2","SARS-CoV-2","GTCAAAAAACATAGGC",4,12.96,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","W106K R124P",2
"lib2","SARS-CoV-2","GTCAAAAAACATTATG",1,5.67,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","D90N N92Y D112W",3
"lib2","SARS-CoV-2","GTCAAAAAAGGTATGT",2,65.19,10.55,-0.29,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCAAAAAGTACGAAC",2,21.45,9.64,-1.19,0.29,2.27,1,0.04,">1 nonsynonymous","N13A N58S F62N N151L G174D",5
"lib2","SARS-CoV-2","GTCAAAACACCGTCCT",2,37.59,10.79,-0.04,0.06,3,1.02,0,"1 nonsynonymous","K56T",1
"lib2","SARS-CoV-2","GTCAAAACACGTGCTT",3,3.72,NA,NA,NA,NA,NA,NA,"stop","N4* L57W D68E I88N N120E P177L",6
"lib2","SARS-CoV-2","GTCAAAACTTTGAATT",5,35.3,10.86,0.03,0.05,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCAAAATACTCTAGT",2,28.96,10.79,-0.05,0.06,2.97,1.06,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","GTCAAAATATCCCCGA",6,11.72,NA,NA,NA,NA,NA,NA,"stop","L5K K26P S41T F47* A89K H189C",6
"lib2","SARS-CoV-2","GTCAAAATATGTTAAT",1,56.84,10.62,-0.22,0.04,2.9,1.04,0,"1 nonsynonymous","A33N",1
"lib2","SARS-CoV-2","GTCAAAATTTATAGTA",1,37.68,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S43N K48I T100S C102F G152C",5
"lib2","SARS-CoV-2","GTCAAACAAAACTATA",6,1.45,NA,NA,NA,NA,NA,NA,"stop","W106I R136I P149*",3
"lib2","SARS-CoV-2","GTCAAACATAGCCTCA",6,80.89,10.43,-0.41,0.04,2.84,1.16,0,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","GTCAAACATTAAGCAT",15,205.88,10.64,-0.19,0.02,2.89,1.09,0,">1 nonsynonymous","P54H K87Y P149L",3
"lib2","SARS-CoV-2","GTCAAACCAAACCTGT",8,48.28,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","E10V C61R I88N",3
"lib2","SARS-CoV-2","GTCAAACCCATGGACA",2,28.03,10.71,-0.13,0.07,2.96,1.03,0,">1 nonsynonymous","S41T N151F",2
"lib2","SARS-CoV-2","GTCAAACCGTAAAGCC",2,13.87,9.92,-0.91,0.12,2.72,1.19,0.01,">1 nonsynonymous","V37C A89C",2
"lib2","SARS-CoV-2","GTCAAACCTCGTCCCA",8,23.52,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N1T D59S N64D V77G A81S G166I T201L",7
"lib2","SARS-CoV-2","GTCAAACGATACATCG",2,12.01,8.6,-2.24,0.19,1.85,1.06,0.02,">1 nonsynonymous","Y121H Y165L",2
"lib2","SARS-CoV-2","GTCAAACGATATTTAC",7,94.11,9.61,-1.23,0.07,2.55,1.08,0,">1 nonsynonymous","L5D P133S G174W",3
"lib2","SARS-CoV-2","GTCAAACGTGCTAATA",6,76.84,8.21,-2.62,0.11,1.86,1.1,0,">1 nonsynonymous","N4L T55Q Y119G G152V",4
"lib2","SARS-CoV-2","GTCAAACTATGCACTA",5,228.59,10.9,0.06,0.04,2.93,1.08,0,"1 nonsynonymous","N4E",1
"lib2","SARS-CoV-2","GTCAAAGAAGAGTTGG",3,47.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14D N30E D98F Q176M",4
"lib2","SARS-CoV-2","GTCAAAGACTCTAGGT",1,21.39,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","I80L G146R T170K",3
"lib2","SARS-CoV-2","GTCAAAGATACGCAGG",8,43.51,9.4,-1.43,0.12,1.88,1.12,0.01,">1 nonsynonymous","P7T R127K E141M K199S",4
"lib2","SARS-CoV-2","GTCAAAGATCAAGCGA",8,188.64,10.84,0,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCAAATAACTCCAAA",5,21.43,8.49,-2.35,0.17,1.93,1.2,0.01,">1 nonsynonymous","C6M Q84S A145G V173W",4
"lib2","SARS-CoV-2","GTCAAATAACTGTGCG",8,93.5,10.55,-0.29,0.04,2.91,1.07,0,">1 nonsynonymous","V37S D90C",2
"lib2","SARS-CoV-2","GTCAAATAGATTAGGA",1,34.82,10.77,-0.07,0.05,2.76,1.26,0,">1 nonsynonymous","P191H T201S",2
"lib2","SARS-CoV-2","GTCAAATCTCTTCAAC",2,1.82,NA,NA,NA,NA,NA,NA,"stop","Y21K L60V I88* A105S",4
"lib2","SARS-CoV-2","GTCAAATGTTAAGTTG",10,188.28,9.28,-1.56,0.08,1.81,1.1,0,">1 nonsynonymous","V65G D90M Q144E E186G",4
"lib2","SARS-CoV-2","GTCAAATTATTAGAAA",4,59.44,9.91,-0.93,0.08,1.92,1.06,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","GTCAAATTCTATTTAT",1,6.72,10.87,0.03,0.13,2.82,1.18,0.01,"1 nonsynonymous","K128T",1
"lib2","SARS-CoV-2","GTCAACAAAAACGTGC",4,0.63,NA,NA,NA,NA,NA,NA,"stop","S41P N107L K114R C150L N151K Q176*",6
"lib2","SARS-CoV-2","GTCAACACGTATGTTA",4,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24I A42Y R124Q C150S E186V",5
"lib2","SARS-CoV-2","GTCAACACTTAGTAAA",3,63.08,9.65,-1.19,0.09,2.46,1.01,0,">1 nonsynonymous","S45F E154C",2
"lib2","SARS-CoV-2","GTCAACAGATAAACGA",1,3.23,NA,NA,NA,NA,NA,NA,"stop","P7T F17* K87E",3
"lib2","SARS-CoV-2","GTCAACATAAGGCACA",3,21.62,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","V77D L162S",2
"lib2","SARS-CoV-2","GTCAACATACCGTTCG",11,1.75,NA,NA,NA,NA,NA,NA,"stop","A67P Y119* T201Q",3
"lib2","SARS-CoV-2","GTCAACATATACTCGT",16,3.75,NA,NA,NA,NA,NA,NA,"stop","W23* Y66S A105T N118L",4
"lib2","SARS-CoV-2","GTCAACATCAACACTT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","C6* S19M K199L",3
"lib2","SARS-CoV-2","GTCAACCAAACAATTG",5,73.41,10.31,-0.53,0.04,2.66,1.06,0,">1 nonsynonymous","S53A S129A G152W",3
"lib2","SARS-CoV-2","GTCAACCAATACCTAA",2,23.45,10.41,-0.43,0.05,2.97,1.04,0,">1 nonsynonymous","C61H D98Y",2
"lib2","SARS-CoV-2","GTCAACCATGCATCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V P149G",2
"lib2","SARS-CoV-2","GTCAACCCCGACTTTG",1,26.41,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N13R V37D R136G I142A",4
"lib2","SARS-CoV-2","GTCAACCGAGTTCCGT",2,15.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A14I P96S A105T R136M L162Y V181C",6
"lib2","SARS-CoV-2","GTCAACCTCAAACGAT",6,184.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C31L A89P D97S D137L Y175Q",5
"lib2","SARS-CoV-2","GTCAACCTTGAACATA",3,42.3,10.39,-0.45,0.1,2.7,1.16,0,">1 nonsynonymous","A18G P149Y",2
"lib2","SARS-CoV-2","GTCAACGACCTCCTCG",6,22.35,9.86,-0.98,0.12,2.17,1,0.01,">1 nonsynonymous","F17V V181L",2
"lib2","SARS-CoV-2","GTCAACGATAGATCCA",4,37.29,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","S19T W23R Y165V",3
"lib2","SARS-CoV-2","GTCAACGCATATACGG",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N F126A C158R",3
"lib2","SARS-CoV-2","GTCAACGGAACTCATG",1,6.4,6,-4.84,2,3,1.08,0,"1 nonsynonymous","L95D",1
"lib2","SARS-CoV-2","GTCAACTAATTACGTG",4,161.96,10.82,-0.01,0.04,2.95,1.05,0,">1 nonsynonymous","F134Y G196R",2
"lib2","SARS-CoV-2","GTCAACTAGAACTTTA",1,68.68,10.51,-0.33,0.07,2.83,1.04,0,">1 nonsynonymous","D97F Y175F",2
"lib2","SARS-CoV-2","GTCAACTTCAATGACC",12,130.16,10.28,-0.55,0.05,2.73,1.04,0,">1 nonsynonymous","N13L T85S",2
"lib2","SARS-CoV-2","GTCAACTTGAAGGCAA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","L5H A33M Y50F G83M F99T A105V Q176*",7
"lib2","SARS-CoV-2","GTCAACTTGACGATGA",5,51.88,10.85,0.01,0.04,2.94,1.08,0,"1 nonsynonymous","T201E",1
"lib2","SARS-CoV-2","GTCAAGAGCAATTGTC",1,46.08,10.01,-0.83,0.05,2.56,1.11,0,">1 nonsynonymous","V32T Y91S",2
"lib2","SARS-CoV-2","GTCAAGAGGCGGGTAT",7,59.44,9.44,-1.39,0.06,2.07,1.02,0,">1 nonsynonymous","C31Y F44K S129E",3
"lib2","SARS-CoV-2","GTCAAGATGCCGGCTA",2,7.88,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G83D L183P",2
"lib2","SARS-CoV-2","GTCAAGATTAACTACT",4,36.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5C N24P D90H G116C R136C",5
"lib2","SARS-CoV-2","GTCAAGCAAACACAGT",8,25.87,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","R16G T46G D97T V103G T148Q G172E",6
"lib2","SARS-CoV-2","GTCAAGCACGCACACG",2,30.07,9.95,-0.89,0.07,2.87,1,0,">1 nonsynonymous","I2S N107K",2
"lib2","SARS-CoV-2","GTCAAGCAGCCTTGCA",2,23.23,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","E10V Y93L N107W Y121T G172S T201V",6
"lib2","SARS-CoV-2","GTCAAGCTATACCCAA",8,30.04,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","E10P I104N K132S",3
"lib2","SARS-CoV-2","GTCAAGGAAGCAGACA",5,44.24,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","R127S F167L",2
"lib2","SARS-CoV-2","GTCAAGGAATTCCGAA",7,40.14,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5A N40H C49V K87R N92Y T100V L122I V180M",8
"lib2","SARS-CoV-2","GTCAAGGACATGCAAA",4,36.8,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","W106C L122I L131Y",3
"lib2","SARS-CoV-2","GTCAAGGATCGAGCAG",3,0.26,NA,NA,NA,NA,NA,NA,"stop","G51S D59* P96C Y119G",4
"lib2","SARS-CoV-2","GTCAAGGTTATTCATC",20,356.97,6.28,-4.56,0.31,1.5,1.14,0,">1 nonsynonymous","K87L F99L E154N G166L",4
"lib2","SARS-CoV-2","GTCAAGTACTAAGACA",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24V V32H A89H Q163E",4
"lib2","SARS-CoV-2","GTCAAGTATAAGATTG",1,13.22,10.75,-0.08,0.08,2.78,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCAAGTCCAATAGAA",5,62.17,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49S N92C",2
"lib2","SARS-CoV-2","GTCAAGTCTATGGAAC",7,98.81,9.9,-0.94,0.11,1.98,1.03,0,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","GTCAAGTCTCCGCCCT",27,6.72,NA,NA,NA,NA,NA,NA,"stop","R27* S53Y G146Q T148N L188Q",5
"lib2","SARS-CoV-2","GTCAATAACACCCTTA",2,16.15,7.92,-2.91,0.34,1.5,1.02,0.05,">1 nonsynonymous","T46N S69K",2
"lib2","SARS-CoV-2","GTCAATAACGTGCAAT",1,56.57,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","R124S P133N Q144I Y175D Q176H",5
"lib2","SARS-CoV-2","GTCAATAATAGAGTCA",3,36.84,7.09,-3.75,0.3,1.74,1.21,0.01,">1 nonsynonymous","N13D A42Q G83Q D90Y D98H L125T",6
"lib2","SARS-CoV-2","GTCAATACGCCCTGGC",9,95.18,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F99A K114M Y121S R127S S184Y",5
"lib2","SARS-CoV-2","GTCAATAGGCCTGTCA",1,6.19,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F17M D34I",2
"lib2","SARS-CoV-2","GTCAATAGGTGGTTAG",4,83.42,8.43,-2.41,0.08,1.52,1.09,0,">1 nonsynonymous","N30E N107L",2
"lib2","SARS-CoV-2","GTCAATATAGCACTGG",6,93.71,10.52,-0.32,0.04,2.99,1.02,0,">1 nonsynonymous","Y39E D98G",2
"lib2","SARS-CoV-2","GTCAATATTATCCAAA",9,77.15,8.02,-2.81,0.29,1.5,1.09,0.03,">1 nonsynonymous","Q84G W106M Q176L P197T",4
"lib2","SARS-CoV-2","GTCAATCATCTAAATG",9,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M D68V Y119L G174E V182G",5
"lib2","SARS-CoV-2","GTCAATCCCGGCTAAG",3,17.2,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S36R G51L R136Y",3
"lib2","SARS-CoV-2","GTCAATCGAGGAAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L V37H L162*",3
"lib2","SARS-CoV-2","GTCAATCGCACAACAT",5,3.17,NA,NA,NA,NA,NA,NA,"stop","P7I G51V K87*",3
"lib2","SARS-CoV-2","GTCAATCTATCACTAA",1,40.85,9.5,-1.34,0.2,1.74,1.16,0.01,">1 nonsynonymous","V37H Y50M",2
"lib2","SARS-CoV-2","GTCAATGAATCCATAT",5,39.01,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","K48P K128L",2
"lib2","SARS-CoV-2","GTCAATGACTGTTTCA",2,38.89,6,-4.84,1.54,1.5,1.05,0.01,">1 nonsynonymous","V71A N107Y R136W N151P",4
"lib2","SARS-CoV-2","GTCAATGAGGGTAGAC",14,33.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F44V C49W V65Y",3
"lib2","SARS-CoV-2","GTCAATGATAACCACG",2,17.16,6,-4.84,2,2.86,1.11,0.01,">1 nonsynonymous","C61L F134P F167T",3
"lib2","SARS-CoV-2","GTCAATGATACTCAAA",3,23.81,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T140A P161L",2
"lib2","SARS-CoV-2","GTCAATGATCACATAA",2,0.26,NA,NA,NA,NA,NA,NA,"stop","N13* R16M F44C D97Y K132S T148M",6
"lib2","SARS-CoV-2","GTCAATGCTTTTCTAT",1,28.43,9.73,-1.11,0.12,2.58,1.15,0.01,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","GTCAATTAATCCTTCA",2,14.2,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L57H P82H",2
"lib2","SARS-CoV-2","GTCAATTAATTTTTCA",4,77.64,10.68,-0.15,0.06,2.81,1.19,0,">1 nonsynonymous","L111V K128R",2
"lib2","SARS-CoV-2","GTCAATTAGACTGGTT",2,90.77,10.33,-0.5,0.04,2.82,1.07,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","GTCAATTGGGGGTGAT",10,0.36,NA,NA,NA,NA,NA,NA,"stop","T3S F12R F47Y K87C G116* K198*",6
"lib2","SARS-CoV-2","GTCAATTTTGATCCCT",5,65.1,9.92,-0.92,0.06,2.65,1.02,0,">1 nonsynonymous","C6L K26S C61M",3
"lib2","SARS-CoV-2","GTCACAAACGTTAAAA",2,2.03,NA,NA,NA,NA,NA,NA,"stop","C6V F12A A18C Y50S L60M N107D P133* A145F",8
"lib2","SARS-CoV-2","GTCACAAATTTGACAT",1,7.43,10.85,0.01,0.12,2.88,1.16,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","GTCACAAGGCGGGCGT",9,95.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V77E P96F N107K",3
"lib2","SARS-CoV-2","GTCACAATCACTCAAT",5,46.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22T L60F N107W Q176L",4
"lib2","SARS-CoV-2","GTCACAATCGCACTTG",6,73.82,9.79,-1.04,0.02,2.91,1.11,0,">1 nonsynonymous","N64S N118S",2
"lib2","SARS-CoV-2","GTCACAATGAAAACAG",1,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93I W106P",2
"lib2","SARS-CoV-2","GTCACAATTACTAGTC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTCACAATTGCAACAG",13,69.64,6.44,-4.39,0.55,1.5,1.23,0.02,">1 nonsynonymous","I72E Q168L",2
"lib2","SARS-CoV-2","GTCACAATTTAGAGTA",6,86.02,9.56,-1.28,0.07,2.59,1.08,0,">1 nonsynonymous","T46S T63R N118Y",3
"lib2","SARS-CoV-2","GTCACACAGCGAGAAA",5,53.41,10.64,-0.2,0.04,2.92,1.1,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","GTCACACGCACTATTT",2,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46E G86E A105R K114W G155F R179M",6
"lib2","SARS-CoV-2","GTCACAGAAATCAACC",2,11.08,6.13,-4.71,1.1,1.5,1.1,0.04,">1 nonsynonymous","D112N Y119P N157R",3
"lib2","SARS-CoV-2","GTCACAGACACGATAG",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48E N120D",2
"lib2","SARS-CoV-2","GTCACAGACGAATACG",2,0.68,NA,NA,NA,NA,NA,NA,"stop","G172T P197*",2
"lib2","SARS-CoV-2","GTCACAGAGAATACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S139F P161R",2
"lib2","SARS-CoV-2","GTCACAGTACACGAAC",1,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54S N151P",2
"lib2","SARS-CoV-2","GTCACATAAATCCCCT",5,24.09,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","T15V K48N F62S V115Q Y143N P161T",6
"lib2","SARS-CoV-2","GTCACATACAAACGCT",1,12.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I80W Y119F",2
"lib2","SARS-CoV-2","GTCACATATATTTAAG",6,68.21,10.3,-0.54,0.05,3,1,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","GTCACATTACCCAAAA",9,89.44,8.82,-2.01,0.05,2.88,1.07,0,">1 nonsynonymous","G9P G174V",2
"lib2","SARS-CoV-2","GTCACCAAAAAAAAAT",8,78.89,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V77G R136C P169T V180F",4
"lib2","SARS-CoV-2","GTCACCAATGCAACAA",1,5.93,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A33V F167T",2
"lib2","SARS-CoV-2","GTCACCACAAATCGAT",10,76.12,9.63,-1.21,0.07,2.02,1.1,0,">1 nonsynonymous","N13H A18V",2
"lib2","SARS-CoV-2","GTCACCACACCACTTT",20,3.03,NA,NA,NA,NA,NA,NA,"stop","D112M K199*",2
"lib2","SARS-CoV-2","GTCACCACTAGAAACG",2,0,NA,NA,NA,NA,NA,NA,"stop","F8Q A18N D90*",3
"lib2","SARS-CoV-2","GTCACCATAATCGATT",1,5.55,9.24,-1.59,0.42,1.5,1,0.05,">1 nonsynonymous","T46W C49Y",2
"lib2","SARS-CoV-2","GTCACCATGTCCATCC",1,0.49,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","GTCACCCAAATAATGA",10,176.29,10.2,-0.63,0.07,2.46,1.01,0,">1 nonsynonymous","N1A Y123M Q144K",3
"lib2","SARS-CoV-2","GTCACCCAGCCCCATG",5,39.09,10.69,-0.14,0.04,2.88,1.06,0,">1 nonsynonymous","P149L T201E",2
"lib2","SARS-CoV-2","GTCACCCAGGCAGCAA",1,36.93,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y35C R73E P82C Y143L",4
"lib2","SARS-CoV-2","GTCACCCCAAATACCA",12,36.15,9.69,-1.15,0.09,1.92,1.08,0,">1 nonsynonymous","C49M A190N",2
"lib2","SARS-CoV-2","GTCACCCGATAGAATG",7,109.53,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","S19V V37F I142G G152S",4
"lib2","SARS-CoV-2","GTCACCCGATGTAAGT",6,0.46,NA,NA,NA,NA,NA,NA,"stop","N4* P96Q K128S N151I",4
"lib2","SARS-CoV-2","GTCACCCTACACCCAA",3,11.9,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","E135R N157Y",2
"lib2","SARS-CoV-2","GTCACCCTCAACATCA",4,56.99,10.66,-0.18,0.04,2.92,1.05,0,">1 nonsynonymous","C61Y R78H",2
"lib2","SARS-CoV-2","GTCACCGAAAGTATGT",2,45.86,10.85,0.02,0.07,2.82,1.15,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","GTCACCGAAATATAGC",4,130.88,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","E10H N40R F126Y Y159R",4
"lib2","SARS-CoV-2","GTCACCGACATAAGAT",5,13.75,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","P7N V103P G166L",3
"lib2","SARS-CoV-2","GTCACCGCCTAAGCCT",4,65.89,10.81,-0.02,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCACCGGAGGCTTCA",3,15.16,9.59,-1.25,0.37,2.34,1.39,0.06,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","GTCACCTCAGTCAAGT",4,33.64,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A14C R127W",2
"lib2","SARS-CoV-2","GTCACCTCGCACCCCA",9,83.63,8.81,-2.03,0.1,1.5,1.06,0,"1 nonsynonymous","A89L",1
"lib2","SARS-CoV-2","GTCACCTGAAGAACAG",4,62.79,8.61,-2.22,0.11,1.62,1.09,0,">1 nonsynonymous","G86A K94R",2
"lib2","SARS-CoV-2","GTCACGAATATTACCC",1,31.96,8.35,-2.48,0.15,2.96,1,0.01,">1 nonsynonymous","N118M F156E",2
"lib2","SARS-CoV-2","GTCACGAATCTCTCCT",14,196.25,10.78,-0.05,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCACGAGCTCCGAAC",3,15.79,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P54S D68R",2
"lib2","SARS-CoV-2","GTCACGCTAAATATAC",3,31.37,10.81,-0.02,0.08,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCACGGAGATATGCC",6,26.28,8.26,-2.57,0.15,1.5,1.12,0.01,">1 nonsynonymous","E10W G51N K132P F160G",4
"lib2","SARS-CoV-2","GTCACGGGCCTTATAA",1,36.7,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","Y121M G146L",2
"lib2","SARS-CoV-2","GTCACGTGGCTACGTA",3,67.33,7.96,-2.88,0.16,1.5,1.14,0.01,">1 nonsynonymous","I2L K128F Q144S L162C P197Y",5
"lib2","SARS-CoV-2","GTCACGTTCGATAGCA",3,48.31,9.42,-1.41,0.12,2.26,1.05,0,">1 nonsynonymous","A81T P169Y",2
"lib2","SARS-CoV-2","GTCACGTTTGCTATTT",11,116.9,9.8,-1.04,0.04,2.98,1.02,0,">1 nonsynonymous","T15E N58T K87Q T201S",4
"lib2","SARS-CoV-2","GTCACTAGTGCGATGA",1,7.43,10.49,-0.34,0.28,2.37,1.08,0.02,">1 nonsynonymous","T85S W106R",2
"lib2","SARS-CoV-2","GTCACTCGAGCTGCCT",4,27.07,10.87,0.04,0.07,3,1,0,"1 nonsynonymous","N120K",1
"lib2","SARS-CoV-2","GTCACTCTACCTTCAG",1,42.99,10.49,-0.35,0.04,2.86,1.13,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","GTCACTCTACTCACTG",3,19.36,9.31,-1.52,0.08,1.93,1.08,0,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","GTCACTGGAGACTTTC",3,18.02,9.57,-1.26,0.15,2.55,1.02,0.01,">1 nonsynonymous","A22V A33T",2
"lib2","SARS-CoV-2","GTCACTTAAGTGGACC",8,92.59,9.4,-1.44,0.06,2.86,1.11,0,">1 nonsynonymous","I104V Y119N",2
"lib2","SARS-CoV-2","GTCACTTATATTCACA",10,127.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4Y Y35P F44H N107H R179K",5
"lib2","SARS-CoV-2","GTCACTTGGTCCTCTA",7,0.6,NA,NA,NA,NA,NA,NA,"stop","F44*",1
"lib2","SARS-CoV-2","GTCACTTGTCCAAGTT",4,17.3,7.91,-2.93,0.38,1.5,1,0.05,">1 nonsynonymous","L95P S129L",2
"lib2","SARS-CoV-2","GTCAGAAAAAATCACG",3,0,NA,NA,NA,NA,NA,NA,"stop","A14* Y119* P149K E154Y",4
"lib2","SARS-CoV-2","GTCAGAACATTCACGA",3,54.88,9.08,-1.76,0.09,2.88,1.1,0,">1 nonsynonymous","G9S G117F",2
"lib2","SARS-CoV-2","GTCAGAACGCACTACA",2,55.71,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","T85E I88C A145M",3
"lib2","SARS-CoV-2","GTCAGAACGTTGTTTA",5,6.57,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C6E P96V",2
"lib2","SARS-CoV-2","GTCAGAATTAACAAAC",6,71.23,10.02,-0.82,0.09,2.41,1.04,0,">1 nonsynonymous","K26F P96N",2
"lib2","SARS-CoV-2","GTCAGACAACCGAGGC",1,36.8,7.77,-3.07,0.15,1.94,1.1,0.01,">1 nonsynonymous","A42V G83Y T100M G146P",4
"lib2","SARS-CoV-2","GTCAGACAAGGAGGGG",4,121.77,9.99,-0.85,0.06,2.9,1.09,0,">1 nonsynonymous","D59F L125S",2
"lib2","SARS-CoV-2","GTCAGACAATTGCGAG",15,94.26,6.68,-4.16,0.28,1.5,1.12,0.01,">1 nonsynonymous","T3N L38A C102V D112S",4
"lib2","SARS-CoV-2","GTCAGACTTCAACGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8D S45V F62L Y119L",4
"lib2","SARS-CoV-2","GTCAGAGGACAGTCAC",4,0,NA,NA,NA,NA,NA,NA,"stop","A14T V103* N110R P177H",4
"lib2","SARS-CoV-2","GTCAGAGGATAGAGGT",1,11.38,7.78,-3.05,0.37,1.5,1,0.05,">1 nonsynonymous","N92A Q144T",2
"lib2","SARS-CoV-2","GTCAGAGTAAACAACT",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66L A81C I104R N157S",4
"lib2","SARS-CoV-2","GTCAGATAATATAATC",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95K Y119V G155H",3
"lib2","SARS-CoV-2","GTCAGATAGATAAGAA",4,25.58,6.47,-4.37,0.42,1.5,1.1,0.01,">1 nonsynonymous","C6M A14S D59G Q144Y",4
"lib2","SARS-CoV-2","GTCAGATCCAGATAAA",5,14.58,6,-4.84,2,3,1.31,0.03,">1 nonsynonymous","V77G G86Y I104A S129F",4
"lib2","SARS-CoV-2","GTCAGATTAGATATAG",3,11.81,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","V65Q Y121G S147P",3
"lib2","SARS-CoV-2","GTCAGATTGTGTTAAA",11,37.18,6,-4.84,2,3,1.21,0,">1 nonsynonymous","Y35L D90G I104N N120G",4
"lib2","SARS-CoV-2","GTCAGCAAATTGTATA",1,16.4,6.62,-4.22,0.32,1.5,1.09,0.01,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","GTCAGCAATACTCCAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","GTCAGCATATAACACA",1,10.71,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L38H N107Y G116R R127I G174Q R179S",6
"lib2","SARS-CoV-2","GTCAGCATGACCTATT",8,4.32,NA,NA,NA,NA,NA,NA,"stop","S29* A145H G155Y Y175I T201K",5
"lib2","SARS-CoV-2","GTCAGCCTATGGTAAG",4,0.32,NA,NA,NA,NA,NA,NA,"stop","D34F T201*",2
"lib2","SARS-CoV-2","GTCAGCGATACTCTTT",5,0.46,NA,NA,NA,NA,NA,NA,"stop","S29* G51C A105R C158N",4
"lib2","SARS-CoV-2","GTCAGCGTACTGGAAG",5,10.35,8.75,-2.09,0.34,1.5,1.03,0.04,">1 nonsynonymous","T100P T201K",2
"lib2","SARS-CoV-2","GTCAGCTACGGACAGA",1,16.26,8.9,-1.93,0.1,2.91,1.14,0,">1 nonsynonymous","N1I G117N",2
"lib2","SARS-CoV-2","GTCAGCTGCCAATATA",1,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16N D98C L131R S139A",4
"lib2","SARS-CoV-2","GTCAGGAAAACCTTCT",2,1.42,NA,NA,NA,NA,NA,NA,"stop","F12* N40E P54M A105N",4
"lib2","SARS-CoV-2","GTCAGGAACTAAAACT",2,12.77,9.66,-1.18,0.17,2.15,1.13,0.01,">1 nonsynonymous","A67I G83V",2
"lib2","SARS-CoV-2","GTCAGGAACTACGGCG",10,114.82,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N24L F99S Y119V",3
"lib2","SARS-CoV-2","GTCAGGACAACTGATC",1,13.75,9.43,-1.4,0.24,1.5,1,0.04,"1 nonsynonymous","I88Q",1
"lib2","SARS-CoV-2","GTCAGGAGTAAAGCAA",1,24.08,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5S N40A S45L T63D N120Q K132I T140C",7
"lib2","SARS-CoV-2","GTCAGGATACATGAGT",2,24.91,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","GTCAGGCATTAGAATC",3,94.88,8.48,-2.36,0.13,2.9,1.05,0.01,">1 nonsynonymous","N1K T170I",2
"lib2","SARS-CoV-2","GTCAGGCTAATGTAAA",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50L A81L P177A",3
"lib2","SARS-CoV-2","GTCAGGGAACTGTTTT",1,0.6,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTCAGGTCCCTAAAAC",4,40.89,9.51,-1.33,0.17,1.75,1.11,0.01,">1 nonsynonymous","S29H P96R S129G G196W",4
"lib2","SARS-CoV-2","GTCAGGTTGAGCCCTA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S L125G G146H C158N",4
"lib2","SARS-CoV-2","GTCAGTAACATTATAA",6,92.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R78H Y91K W106T R127G",4
"lib2","SARS-CoV-2","GTCAGTAACTCGCAAT",5,67.13,10.93,0.1,0.06,2.94,1.05,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GTCAGTAAGAAAAACC",1,44.79,8.47,-2.36,0.25,1.5,1.09,0.02,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","GTCAGTAATGTGGACG",7,281.65,6,-4.84,0.8,1.5,1.13,0,">1 nonsynonymous","L38N L131A",2
"lib2","SARS-CoV-2","GTCAGTACAGGCATTA",8,100.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99V Q176K",2
"lib2","SARS-CoV-2","GTCAGTACGTAGAATA",3,15.59,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y93D V103D",2
"lib2","SARS-CoV-2","GTCAGTAGCGTTCTGC",2,127.4,9.66,-1.18,0.07,2.61,1.02,0,"1 nonsynonymous","R179K",1
"lib2","SARS-CoV-2","GTCAGTATCCTAGACA",6,111.57,10.8,-0.04,0.03,2.96,1.05,0,">1 nonsynonymous","A42Q D98S",2
"lib2","SARS-CoV-2","GTCAGTCTCGACAGAG",12,186.06,9.66,-1.17,0.07,2.17,1.05,0,">1 nonsynonymous","R78T P133L T201P",3
"lib2","SARS-CoV-2","GTCAGTTAACAATATG",2,33.75,9.31,-1.52,0.16,1.5,1.03,0.01,">1 nonsynonymous","I2W A105L",2
"lib2","SARS-CoV-2","GTCAGTTAGCACAGTT",2,1.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","GTCAGTTTAAAGCTAA",7,72.68,10.72,-0.12,0.03,2.95,1.06,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","GTCAGTTTGTATCCAT",2,42.88,9.86,-0.98,0.06,2.79,1.06,0,">1 nonsynonymous","T3V G155L T201Q",3
"lib2","SARS-CoV-2","GTCAGTTTTTGCATCA",4,17.84,6.43,-4.4,0.68,1.5,1.14,0.04,">1 nonsynonymous","F12T S45Y F167R",3
"lib2","SARS-CoV-2","GTCATAAACTAGAATT",8,28.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V37Y Y119S L183A",3
"lib2","SARS-CoV-2","GTCATAAAGAACTATA",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V V77M S184R",3
"lib2","SARS-CoV-2","GTCATAAAGAGGAGAC",3,31.54,10.72,-0.12,0.07,2.96,1.04,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","GTCATAAAGTCTGGAA",6,30.91,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V32T A89I P96W G172D T201K",5
"lib2","SARS-CoV-2","GTCATAAAGTTGACTC",5,15.24,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","F8W D34V V77W I104N",4
"lib2","SARS-CoV-2","GTCATAAATCACAACA",3,6.41,10.99,0.15,0.12,2.79,1.14,0,">1 nonsynonymous","I2S K56E",2
"lib2","SARS-CoV-2","GTCATAAATGACTCCC",2,34.43,9.49,-1.35,0.42,1.5,1,0.05,">1 nonsynonymous","T55I A81R G86S",3
"lib2","SARS-CoV-2","GTCATAACTATCCAAG",1,16.51,9.53,-1.31,0.1,2.88,1.05,0.01,">1 nonsynonymous","C6S T170S",2
"lib2","SARS-CoV-2","GTCATAACTATCTCCA",6,16.8,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N58L A81K D90H E141R",4
"lib2","SARS-CoV-2","GTCATAACTCCTTTAG",1,21.54,6.74,-4.1,0.37,1.5,1.07,0.02,">1 nonsynonymous","N107E N157T",2
"lib2","SARS-CoV-2","GTCATAAGAACATCTG",2,46.78,7.68,-3.16,0.3,1.5,1.09,0.02,"1 nonsynonymous","Q176F",1
"lib2","SARS-CoV-2","GTCATAAGCAAACGAG",10,90.7,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N4R F12R S41L I80R G166T",5
"lib2","SARS-CoV-2","GTCATAAGCGATAATT",18,317.2,10.12,-0.71,0.04,2.85,1.03,0,">1 nonsynonymous","G9C R136K S184H",3
"lib2","SARS-CoV-2","GTCATAAGTACAACTG",8,60.92,10.78,-0.06,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCATAATAGAAATCC",4,39.18,10.17,-0.67,0.08,2.94,1.01,0,">1 nonsynonymous","C31S T201M",2
"lib2","SARS-CoV-2","GTCATAATCAACGAAA",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T D90F W106R",3
"lib2","SARS-CoV-2","GTCATAATTCTCCACA",1,6.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89K Y143V V182C",3
"lib2","SARS-CoV-2","GTCATAATTGCATTCA",2,160.63,10.81,-0.03,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCATACAATTCTCCA",3,77.28,10.05,-0.79,0.09,2.43,1.02,0,">1 nonsynonymous","W106S T201C",2
"lib2","SARS-CoV-2","GTCATACACACGTATT",5,110.22,7.93,-2.91,0.1,2.4,1.11,0,"1 nonsynonymous","C158R",1
"lib2","SARS-CoV-2","GTCATACATATTGAAT",4,44.08,9.9,-0.93,0.08,2.85,1.06,0,"1 nonsynonymous","N118V",1
"lib2","SARS-CoV-2","GTCATACCTGACTACC",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P96I",2
"lib2","SARS-CoV-2","GTCATACCTTGCGCCT",7,113.94,10.59,-0.25,0.04,2.91,1.07,0,">1 nonsynonymous","L5K L38V",2
"lib2","SARS-CoV-2","GTCATACGTAGACACG",4,54.4,10.69,-0.15,0.05,2.87,1.13,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","GTCATACGTGCCAAAT",10,196.22,10.8,-0.04,0.04,2.92,1.1,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","GTCATAGAAAGTGCAG",2,5.97,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","C6I C61G F167Q",3
"lib2","SARS-CoV-2","GTCATAGAAGAGAGAT",8,3.37,NA,NA,NA,NA,NA,NA,"stop","S41L K56* D90R K128R T140K",5
"lib2","SARS-CoV-2","GTCATAGAATTAAACG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","L5* A89G V153S T201V",4
"lib2","SARS-CoV-2","GTCATAGAGGAATATT",9,52.65,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","F12V C61R P133Y R179F",4
"lib2","SARS-CoV-2","GTCATAGGGAATTTAT",7,320.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A14I Q144P Q176R A190G",4
"lib2","SARS-CoV-2","GTCATAGTAAATAACT",1,15.31,10.12,-0.72,0.09,2.99,1.02,0.01,">1 nonsynonymous","P54S G146S G152Y",3
"lib2","SARS-CoV-2","GTCATAGTAACTTAAT",3,49.8,10.84,0,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCATATAAAGCACAA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","D90L T100* Y143T",3
"lib2","SARS-CoV-2","GTCATATAACACCGAT",3,29.41,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","V20M V65R R73L",3
"lib2","SARS-CoV-2","GTCATATAATTATAGA",4,44.1,6,-4.84,2,1.89,1.1,0.01,">1 nonsynonymous","R25D S139L Y178L",3
"lib2","SARS-CoV-2","GTCATATTAATAGAAC",2,19.95,6.69,-4.14,0.4,2.08,1.05,0.03,">1 nonsynonymous","T3N N40F D90S I142G T170I",5
"lib2","SARS-CoV-2","GTCATATTGGCCAGGG",7,145.99,9.94,-0.89,0.11,2.19,1.06,0,"1 nonsynonymous","K26G",1
"lib2","SARS-CoV-2","GTCATCAAACGCTAGC",14,42.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L57T Q84L Q144L P169H",4
"lib2","SARS-CoV-2","GTCATCAAACTGTCCA",2,56.15,8.91,-1.93,0.09,2.74,1.06,0,">1 nonsynonymous","P54K P133V Y159F",3
"lib2","SARS-CoV-2","GTCATCAATTTGTTTC",12,57.66,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G74C L95G A105I",3
"lib2","SARS-CoV-2","GTCATCATACCCTAAC",1,7.65,10.46,-0.38,0.1,3,1,0,">1 nonsynonymous","T140E F156R K198A",3
"lib2","SARS-CoV-2","GTCATCATCAGGAGAA",4,72.61,9.92,-0.92,0.07,2.68,1.05,0,">1 nonsynonymous","I2Y S108V",2
"lib2","SARS-CoV-2","GTCATCATTAAACTCT",1,6.59,10.1,-0.74,0.31,1.89,1.02,0.05,">1 nonsynonymous","F47N V115L",2
"lib2","SARS-CoV-2","GTCATCCAACCTAGAT",3,14.73,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","GTCATCCCAGACTTAT",9,150.49,10.57,-0.27,0.04,2.91,1.05,0,">1 nonsynonymous","A18K Y39F V173F",3
"lib2","SARS-CoV-2","GTCATCCCTTAACTAA",1,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Q S43F Y91I F99S Y119I T170Y",6
"lib2","SARS-CoV-2","GTCATCCGTAGCCATG",2,77.44,10.9,0.06,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCATCGCATTTAACA",9,49.57,6.81,-4.02,0.5,1.5,1.04,0.05,">1 nonsynonymous","Y39K C49V K94Y N118I I142G",5
"lib2","SARS-CoV-2","GTCATCTAGCAGTGTG",8,17.55,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A42M G86F",2
"lib2","SARS-CoV-2","GTCATCTCCACTGGTA",1,13.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3H L38F D59S V182R",4
"lib2","SARS-CoV-2","GTCATCTCCGTAGTAC",2,37.11,10.23,-0.6,0.03,3,1,0,">1 nonsynonymous","Y35S N151K T201S",3
"lib2","SARS-CoV-2","GTCATCTGAGCGCTAG",2,12.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K D90M",2
"lib2","SARS-CoV-2","GTCATCTGCCGTATGC",1,0.96,NA,NA,NA,NA,NA,NA,"stop","T55A R124E Y143* V173T",4
"lib2","SARS-CoV-2","GTCATCTTAGAACTCC",3,84.29,9.3,-1.54,0.05,2.94,1.09,0,">1 nonsynonymous","S129G Q168V",2
"lib2","SARS-CoV-2","GTCATCTTTCATTACG",2,11,9.65,-1.19,0.06,2.98,1.01,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","GTCATCTTTGCCTTGA",7,41.18,10.85,0.01,0.07,2.96,1.06,0,">1 nonsynonymous","T3P K56A K199N",3
"lib2","SARS-CoV-2","GTCATGAAACGGGTTT",3,26.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K48P N110I L125Y",3
"lib2","SARS-CoV-2","GTCATGAAATAGATTG",10,1.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","GTCATGACAAATCAAG",9,0.64,NA,NA,NA,NA,NA,NA,"stop","A33L T63M G83*",3
"lib2","SARS-CoV-2","GTCATGACATATTATA",6,63.34,9.73,-1.1,0.09,1.99,1.08,0,">1 nonsynonymous","G9M V20A E154G",3
"lib2","SARS-CoV-2","GTCATGACGTAAAACG",15,321.04,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","Y39T C49S N64M D90G T201N",5
"lib2","SARS-CoV-2","GTCATGACTATTAGAA",12,733.03,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T3S V32S D137V R179W",4
"lib2","SARS-CoV-2","GTCATGATCCTGTTTG",4,27.74,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","N1M D34L I80R E141Q T148L K198G",6
"lib2","SARS-CoV-2","GTCATGCACTAATACA",4,61.02,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S29R G51L P96R",3
"lib2","SARS-CoV-2","GTCATGCCATTATAAT",3,23.16,6.71,-4.12,0.4,1.5,1.18,0.03,">1 nonsynonymous","K87I V103R",2
"lib2","SARS-CoV-2","GTCATGGAGTTATCGT",8,44.68,10.75,-0.08,0.03,2.99,1.03,0,">1 nonsynonymous","C61S H189Q T201L",3
"lib2","SARS-CoV-2","GTCATGGATTTGCCGC",3,82.53,9.87,-0.96,0.06,2.8,1.1,0,">1 nonsynonymous","Y66S G116T",2
"lib2","SARS-CoV-2","GTCATTAAGATGAGTA",1,14.15,10.68,-0.16,0.06,2.98,1.04,0,"1 nonsynonymous","L38M",1
"lib2","SARS-CoV-2","GTCATTAGCCGACTAA",3,37.31,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","N4I D34R N64W I80K G172S",5
"lib2","SARS-CoV-2","GTCATTAGGAACTATT",2,17.62,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","C158W F167H T201W",3
"lib2","SARS-CoV-2","GTCATTAGGGTGATAG",7,45.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2N V20A N58I D112P",4
"lib2","SARS-CoV-2","GTCATTAGGTAATCGG",6,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48H I104T V181P P197M",4
"lib2","SARS-CoV-2","GTCATTATACTATTCA",6,5.23,NA,NA,NA,NA,NA,NA,"stop","A81Y F156* A190S",3
"lib2","SARS-CoV-2","GTCATTATGAGTTTAT",5,121.86,10.75,-0.08,0.04,2.98,1.05,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","GTCATTCCTACGTTAC",5,20.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51N C102T T201S",3
"lib2","SARS-CoV-2","GTCATTGCTTTAGTAA",3,80.74,10.84,0,0.06,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCATTGGCACTACAC",2,23.83,10.8,-0.04,0.09,2.91,1.11,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","GTCATTGGCGTTTTCA",1,5.75,6,-4.84,2,3,1,0,">1 nonsynonymous","I2G V180N",2
"lib2","SARS-CoV-2","GTCATTTCGCAGACTT",2,65.4,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V20P S43T D112R P191T",4
"lib2","SARS-CoV-2","GTCATTTCTAGTGTAC",5,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36Y L60Y N92S F99K F167G E186N",6
"lib2","SARS-CoV-2","GTCATTTCTGACAGAT",1,42.55,9.88,-0.96,0.05,2.91,1.04,0,">1 nonsynonymous","F47L E154H",2
"lib2","SARS-CoV-2","GTCATTTTATCCTAAG",4,31.42,10.47,-0.36,0.05,2.87,1.09,0,">1 nonsynonymous","A22E N151I",2
"lib2","SARS-CoV-2","GTCATTTTCGACCAAG",6,32.84,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","T15I V20L S53V L60R R136V",5
"lib2","SARS-CoV-2","GTCCAAAAAAATAAGT",3,97.22,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2V Q176P",2
"lib2","SARS-CoV-2","GTCCAAAAAATAATTG",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G T55Y Y143M",3
"lib2","SARS-CoV-2","GTCCAAAACAAGCCTG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","T46S T55E Q84*",3
"lib2","SARS-CoV-2","GTCCAAAAGTTTTAGA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53I P82S N107R",3
"lib2","SARS-CoV-2","GTCCAAAATAAAATGG",7,105.46,10.42,-0.42,0.04,2.83,1.11,0,">1 nonsynonymous","A33V F44K Y143F",3
"lib2","SARS-CoV-2","GTCCAAAATATAAAAA",19,244.88,9.88,-0.95,0.03,2.84,1.06,0,">1 nonsynonymous","F62L G152I",2
"lib2","SARS-CoV-2","GTCCAAAATATTGTCG",14,149.16,10.74,-0.09,0.04,2.88,1.11,0,">1 nonsynonymous","L5V K199Y",2
"lib2","SARS-CoV-2","GTCCAAACTTCGAATG",2,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L V37I D90H D97W V103D F156D",6
"lib2","SARS-CoV-2","GTCCAAAGACAGGGAA",3,30.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K87C I104F S113Y C158L A190V",5
"lib2","SARS-CoV-2","GTCCAAAGAGGGGCAT",7,56.02,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6Q F12V K132N P161S T201S",5
"lib2","SARS-CoV-2","GTCCAAAGCTTAAACT",1,84.3,10.83,-0.01,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCAAATATAGACAA",2,32.72,10.88,0.05,0.06,2.95,1.06,0,">1 nonsynonymous","E10D K114V K198N",3
"lib2","SARS-CoV-2","GTCCAAATATGTCAAT",10,73.77,10.02,-0.82,0.06,2.35,1.07,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","GTCCAAATCTCAAGGC",3,41.61,10.56,-0.28,0.06,2.95,1.05,0,"1 nonsynonymous","E10L",1
"lib2","SARS-CoV-2","GTCCAAATGGCGGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42C G152C",2
"lib2","SARS-CoV-2","GTCCAACCAATAGCCA",1,13.12,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","Q84H F99Q",2
"lib2","SARS-CoV-2","GTCCAACCAGCTATGA",2,21.64,7.82,-3.01,0.22,2.21,1.21,0.01,"1 nonsynonymous","C158K",1
"lib2","SARS-CoV-2","GTCCAACTGTCTTTTT",3,26.67,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","F17Y F47N P149W",3
"lib2","SARS-CoV-2","GTCCAAGGTATTCCCG",6,324.08,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L5M S29L D90T A105V N120L",5
"lib2","SARS-CoV-2","GTCCAATAGCCTTCGA",3,39.59,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","K48D Y66C F70K K87N",4
"lib2","SARS-CoV-2","GTCCAATATAGCAGGA",6,120.12,10.82,-0.01,0.06,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCAATTCTTCTCCT",5,72.84,8.84,-2,0.05,2.63,1.05,0,">1 nonsynonymous","F62D E141D E154Y S200L",4
"lib2","SARS-CoV-2","GTCCACAAATACCACA",10,133.07,10.37,-0.47,0.07,2.84,1.05,0,">1 nonsynonymous","A18C T140R",2
"lib2","SARS-CoV-2","GTCCACAATGTCGCAA",23,137.41,9.04,-1.79,0.08,1.98,1.05,0,">1 nonsynonymous","L60F K94G F156H S200I",4
"lib2","SARS-CoV-2","GTCCACACAACGCTAA",2,17.25,10.85,0.01,0.05,2.91,1.11,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","GTCCACACAGACGTCC",1,16.29,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","V11E Y35I D98Y N109L D137A K198H",6
"lib2","SARS-CoV-2","GTCCACACTTGTAACT",23,4.28,NA,NA,NA,NA,NA,NA,"stop","G9* T15R Y91P",3
"lib2","SARS-CoV-2","GTCCACATGATAAGAT",5,0.11,NA,NA,NA,NA,NA,NA,"stop","N40F K94L R136*",3
"lib2","SARS-CoV-2","GTCCACCAAAAAAGAG",3,42.46,10.26,-0.57,0.08,2.7,1.02,0,"1 nonsynonymous","I72T",1
"lib2","SARS-CoV-2","GTCCACCAACACGACA",15,234.43,10.3,-0.54,0.03,2.87,1.03,0,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","GTCCACCCCTAAGGAT",3,60.89,10.77,-0.06,0.04,2.85,1.17,0,">1 nonsynonymous","F8W Y39E P54I T100M",4
"lib2","SARS-CoV-2","GTCCACCCGCCACTAA",1,17.11,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35V L57K V77W D90L S113L K128L",6
"lib2","SARS-CoV-2","GTCCACCGTACTCGGC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","Y119S E135*",2
"lib2","SARS-CoV-2","GTCCACCTAGAAAAGG",2,38.15,10.1,-0.73,0.07,2.67,1.18,0,">1 nonsynonymous","T3E D34A",2
"lib2","SARS-CoV-2","GTCCACGCAGCCCATA",15,24,NA,NA,NA,NA,NA,NA,"stop","P7* S164Q",2
"lib2","SARS-CoV-2","GTCCACGCATAATTGA",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K A105H",2
"lib2","SARS-CoV-2","GTCCACGGTTTATAAG",7,45.02,7.43,-3.41,0.16,1.5,1.04,0.01,">1 nonsynonymous","I2N I28R Y143L",3
"lib2","SARS-CoV-2","GTCCACTAATCATATC",1,17.06,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","S41P D68L P82L K87G T100N",5
"lib2","SARS-CoV-2","GTCCACTATTAAAGGC",16,4.9,NA,NA,NA,NA,NA,NA,"stop","G9V S41Y D68* G101R",4
"lib2","SARS-CoV-2","GTCCACTCTCTCAATC",5,0.9,NA,NA,NA,NA,NA,NA,"stop","A14P S36* S113*",3
"lib2","SARS-CoV-2","GTCCACTGAAAGAATT",2,40.88,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G86P R124S Q144D",3
"lib2","SARS-CoV-2","GTCCACTGTGGAATTG",5,18.2,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C6D V11S K26G D90L P169Q",5
"lib2","SARS-CoV-2","GTCCACTTAACTTCTG",17,171.3,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11H F44R G83A L95K",4
"lib2","SARS-CoV-2","GTCCAGAACGTTGACA",15,159.94,10.65,-0.19,0.03,2.92,1.06,0,">1 nonsynonymous","S45T N64P",2
"lib2","SARS-CoV-2","GTCCAGACGCCCTGCG",18,346.94,10.83,-0.01,0.05,2.92,1.09,0,">1 nonsynonymous","K56Q N110S",2
"lib2","SARS-CoV-2","GTCCAGCACTACAGAA",8,82.49,10.85,0.01,0.04,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCCAGCAGGATAATC",11,154.16,9.42,-1.42,0.09,2.43,1.06,0,">1 nonsynonymous","G51S Y143M",2
"lib2","SARS-CoV-2","GTCCAGGATCAACCAT",1,18.93,10.8,-0.04,0.06,3,1,0,"1 nonsynonymous","N40K",1
"lib2","SARS-CoV-2","GTCCAGGTCTACCAAC",4,1.95,NA,NA,NA,NA,NA,NA,"stop","N4*",1
"lib2","SARS-CoV-2","GTCCAGTATCCGGTTC",4,62.56,10.68,-0.16,0.08,2.86,1.12,0,">1 nonsynonymous","N1A Y35T F62L",3
"lib2","SARS-CoV-2","GTCCAGTCAACTTGCA",14,130.74,10.8,-0.03,0.04,2.9,1.11,0,"1 nonsynonymous","I2C",1
"lib2","SARS-CoV-2","GTCCAGTCTCGAACTG",3,9.16,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S41I R124Q I142K",3
"lib2","SARS-CoV-2","GTCCAGTGTAACCCTG",2,40.4,10.58,-0.26,0.04,2.85,1.15,0,">1 nonsynonymous","G116P F134Y F160P A192S",4
"lib2","SARS-CoV-2","GTCCAGTTACTTAGGC",2,14.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C6K S41G N64R Y91I T140N P149R",6
"lib2","SARS-CoV-2","GTCCATAAACTTCACA",2,0.92,NA,NA,NA,NA,NA,NA,"stop","F17L G74* F156T Q168P G196P",5
"lib2","SARS-CoV-2","GTCCATAAGATGTAGT",1,14.53,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","A14D D59Q W106G V180I",4
"lib2","SARS-CoV-2","GTCCATAATACTACTA",3,51.83,10.86,0.02,0.06,2.86,1.14,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","GTCCATAATCACAGTA",2,18.07,10.7,-0.13,0.12,2.91,1.14,0,">1 nonsynonymous","R16F G51N S147T",3
"lib2","SARS-CoV-2","GTCCATACAACGAAAG",2,3.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y178E L187T",2
"lib2","SARS-CoV-2","GTCCATACGAGAGATG",4,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35K F99D S129C",3
"lib2","SARS-CoV-2","GTCCATACTTCCAAAC",1,32.69,10.82,-0.01,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCATAGAAGCAGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","L60R P82F F99* R136K V182*",5
"lib2","SARS-CoV-2","GTCCATAGATGGTGCT",1,22.89,9.44,-1.39,0.11,2.43,1.14,0.01,">1 nonsynonymous","C6K V32A Y143H",3
"lib2","SARS-CoV-2","GTCCATAGCCGTCCCA",3,8.23,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S41V L60F K94L Q144H",4
"lib2","SARS-CoV-2","GTCCATAGCTCAATGA",4,54.17,10.81,-0.02,0.04,2.95,1.07,0,">1 nonsynonymous","T55S D90L Y123K",3
"lib2","SARS-CoV-2","GTCCATATCAAGCCTT",6,75.74,10.86,0.02,0.03,3,1.01,0,">1 nonsynonymous","T55L S200L",2
"lib2","SARS-CoV-2","GTCCATATTCAAGCAT",6,66.74,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","W23G N92R Y121P",3
"lib2","SARS-CoV-2","GTCCATATTTCTGTGC",5,13.11,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K56W V71G N92S F134C F185K",5
"lib2","SARS-CoV-2","GTCCATCAACCGCCAT",12,83.74,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T3E Y50L P161S",3
"lib2","SARS-CoV-2","GTCCATCACGTACCGT",3,63.04,8.65,-2.18,0.09,2.87,1.03,0,">1 nonsynonymous","C6S T170R G196K",3
"lib2","SARS-CoV-2","GTCCATCAGCTGAAAA",2,45.09,10.31,-0.52,0.05,2.97,1.09,0,">1 nonsynonymous","S129T F156L",2
"lib2","SARS-CoV-2","GTCCATGCACAAAACG",5,35.19,10.8,-0.04,0.07,2.88,1.1,0,">1 nonsynonymous","G9S S41Q V173Y Y178H",4
"lib2","SARS-CoV-2","GTCCATGGCATCCGAC",14,293.7,10.87,0.03,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCATGGCTTTTCAA",1,128.18,10.45,-0.38,0.04,2.86,1.07,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","GTCCATGTATGCCATT",1,71.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4T S19L P82L K87S T100C V115G F167W Y175A",8
"lib2","SARS-CoV-2","GTCCATGTCACAATAT",2,7.17,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","T3S V11H N107I D112S",4
"lib2","SARS-CoV-2","GTCCATTAAAAAGTAC",5,87.85,10.01,-0.83,0.07,2.32,1.04,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","GTCCATTACGGTATAT",10,17.07,6,-4.84,2,3,1.26,0.01,"1 nonsynonymous","L183S",1
"lib2","SARS-CoV-2","GTCCATTATACATTCG",3,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K Y35S T140Y",3
"lib2","SARS-CoV-2","GTCCATTGCCCATATC",7,0.67,NA,NA,NA,NA,NA,NA,"stop","S41* K48Q C61A S129D P149D",5
"lib2","SARS-CoV-2","GTCCATTTAGGCCAAA",10,5.05,NA,NA,NA,NA,NA,NA,"stop","A18V S19* V173I",3
"lib2","SARS-CoV-2","GTCCATTTCATCACAA",1,43.43,10.07,-0.77,0.11,2.4,1,0,"1 nonsynonymous","A81F",1
"lib2","SARS-CoV-2","GTCCCAAACAGGACTA",8,76.42,10.84,0.01,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCCAAACCCTAGCG",5,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172T",1
"lib2","SARS-CoV-2","GTCCCAAAGAACATGA",2,36.98,9.76,-1.08,0.1,2.1,1.13,0,">1 nonsynonymous","P96N E141Y",2
"lib2","SARS-CoV-2","GTCCCAAAGAATCTCG",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y D90T N120I S129C L187G",5
"lib2","SARS-CoV-2","GTCCCAAATAATCGCG",1,39.78,10.75,-0.09,0.09,2.82,1.2,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","GTCCCAAATAGCCTCC",4,49.23,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","P7S F12N T55P D90F E135R F167L",6
"lib2","SARS-CoV-2","GTCCCAACTCGGGCTT",7,147.2,9.12,-1.72,0.04,2.9,1.12,0,">1 nonsynonymous","G155M T170M",2
"lib2","SARS-CoV-2","GTCCCAAGGACAGGTG",5,61.3,10.55,-0.28,0.05,2.93,1.09,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","GTCCCAATGTGTATTT",5,154.48,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86L S147R F167K",3
"lib2","SARS-CoV-2","GTCCCACCAAAATGAA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","I2V Y121S N130S F160*",4
"lib2","SARS-CoV-2","GTCCCACCCTCTAGGT",1,29.96,10.79,-0.04,0.04,2.99,1,0,">1 nonsynonymous","Y35L Y66S L162I",3
"lib2","SARS-CoV-2","GTCCCACCCTTGCTTT",11,123.74,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L60N W106S C158V Y175E",4
"lib2","SARS-CoV-2","GTCCCACGGCCCCACG",3,19.78,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S36M N58Y C150D",3
"lib2","SARS-CoV-2","GTCCCACGTTCATGAA",16,5.54,7.99,-2.85,0.51,1.95,1.11,0.07,">1 nonsynonymous","V20M P161M",2
"lib2","SARS-CoV-2","GTCCCAGAACATAAAG",14,34.96,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R27M A81L V103N Y119L",4
"lib2","SARS-CoV-2","GTCCCAGGCATTGGAA",2,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95C S139G G146A C158H",4
"lib2","SARS-CoV-2","GTCCCAGGGTTCGGCA",2,55.37,8.31,-2.53,0.22,1.97,1.05,0.02,">1 nonsynonymous","C61R N107I",2
"lib2","SARS-CoV-2","GTCCCATAACATCTGT",4,56.89,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G86T G152P",2
"lib2","SARS-CoV-2","GTCCCATAATACAGAA",3,127.77,9.96,-0.88,0.05,2.93,1.02,0,">1 nonsynonymous","F134G Q168M H189C",3
"lib2","SARS-CoV-2","GTCCCATCTAGCAGGC",3,27.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F47C D68L A89H",3
"lib2","SARS-CoV-2","GTCCCATCTATTACCG",20,265.66,8.15,-2.69,0.12,1.83,1.12,0.01,">1 nonsynonymous","K94C T100I G117I",3
"lib2","SARS-CoV-2","GTCCCATTCTTAGAAT",1,8.84,7.36,-3.48,0.53,1.5,1,0.03,">1 nonsynonymous","N1V F8L S19Q K94L",4
"lib2","SARS-CoV-2","GTCCCCATCATTCGAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S29* D98A",2
"lib2","SARS-CoV-2","GTCCCCCAAGAAACGT",13,124.68,10.87,0.03,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCCCCCAAACAAAT",10,108.95,8.21,-2.63,0.12,2.41,1.09,0.01,">1 nonsynonymous","A42V K87N S113V",3
"lib2","SARS-CoV-2","GTCCCCCCAACTACCT",7,208.12,10.32,-0.52,0.03,2.89,1.05,0,">1 nonsynonymous","F62N T100Q P197Q",3
"lib2","SARS-CoV-2","GTCCCCCCAGATCCAG",5,83.63,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S41P E141G C150D",3
"lib2","SARS-CoV-2","GTCCCCCCTATTGAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N40S N64* A145C",3
"lib2","SARS-CoV-2","GTCCCCCTATAACGAT",1,20.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V32A A42R D97I Y119P E135W P161Y R179L",7
"lib2","SARS-CoV-2","GTCCCCCTTACCACAC",3,0,NA,NA,NA,NA,NA,NA,"stop","F12* I104F",2
"lib2","SARS-CoV-2","GTCCCCGTCATTATGT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44A F62G D90*",3
"lib2","SARS-CoV-2","GTCCCCGTGTGGCGAT",8,76.14,9.76,-1.08,0.09,2.27,1.06,0,">1 nonsynonymous","G86S V173L",2
"lib2","SARS-CoV-2","GTCCCCTTAACAGATT",1,0.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68N",1
"lib2","SARS-CoV-2","GTCCCGAAATCTCCGG",2,0.26,NA,NA,NA,NA,NA,NA,"stop","N40D I104K Y123*",3
"lib2","SARS-CoV-2","GTCCCGATCCCCTCTA",4,24.19,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3H N30W Y93T L131G",4
"lib2","SARS-CoV-2","GTCCCGCATAAAACCA",6,0,NA,NA,NA,NA,NA,NA,"stop","P7K F12K C102D K114* R136L Q168A",6
"lib2","SARS-CoV-2","GTCCCGCGGATACTAT",14,34.55,8.44,-2.4,0.41,1.5,1.22,0.06,">1 nonsynonymous","D59I K87I W106R G117F K128S V180R T201M",7
"lib2","SARS-CoV-2","GTCCCGCGGTGCCGGG",6,47.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7A T15K V37C K48N K94D L111S",6
"lib2","SARS-CoV-2","GTCCCGCGTTACAAAC",4,4.51,NA,NA,NA,NA,NA,NA,"stop","P7R L60M F99K G117D T148*",5
"lib2","SARS-CoV-2","GTCCCGGCTATACCAT",1,0.3,NA,NA,NA,NA,NA,NA,"stop","S113* R136N",2
"lib2","SARS-CoV-2","GTCCCGTGCACTGAAT",2,0.31,NA,NA,NA,NA,NA,NA,"stop","C61* A89L Y143I S147I P197L",5
"lib2","SARS-CoV-2","GTCCCGTTGATGTTGT",2,20.46,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","S45Y P96L V103M K114R",4
"lib2","SARS-CoV-2","GTCCCTAAGAGGAACG",11,177.07,10.47,-0.36,0.03,2.97,1.02,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","GTCCCTAAGCAGTATA",7,124.46,9.07,-1.77,0.05,2.81,1.06,0,">1 nonsynonymous","L95I Y143V S184N",3
"lib2","SARS-CoV-2","GTCCCTAGATATAAGG",3,43.95,9.69,-1.15,0.05,1.99,1,0,"1 nonsynonymous","A67G",1
"lib2","SARS-CoV-2","GTCCCTATGGTTCGCA",9,4.03,NA,NA,NA,NA,NA,NA,"stop","T55* G86* K114F",3
"lib2","SARS-CoV-2","GTCCCTCAAGTAAGCC",3,80.8,9.31,-1.53,0.05,2.23,1.07,0,">1 nonsynonymous","G9V Q79L",2
"lib2","SARS-CoV-2","GTCCCTCTCGATTTTT",1,30.48,8.17,-2.67,0.2,2.21,1.17,0.01,">1 nonsynonymous","A14I F62T Q84H Y119P",4
"lib2","SARS-CoV-2","GTCCCTGCCTCCTAAA",4,52.86,10.52,-0.31,0.06,2.78,1.14,0,">1 nonsynonymous","A14N N40S T201G",3
"lib2","SARS-CoV-2","GTCCCTGTCTTTGGAA",2,24.23,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","T3A F12M F44Q F70L E154H Q163T G174Q L188Y",8
"lib2","SARS-CoV-2","GTCCCTTAATTAAGAT",1,3.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8I",1
"lib2","SARS-CoV-2","GTCCCTTCGATAAACG",1,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N S45T K56P I142L",4
"lib2","SARS-CoV-2","GTCCCTTCGTAATTAG",1,36.67,10.75,-0.09,0.05,2.97,1.04,0,"1 nonsynonymous","L188H",1
"lib2","SARS-CoV-2","GTCCGAAACCCTTCCA",2,13.8,7.39,-3.44,0.41,1.5,1.17,0.05,">1 nonsynonymous","V20L G174L",2
"lib2","SARS-CoV-2","GTCCGAAATAAGTGTG",1,5.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36W P96V T100A",3
"lib2","SARS-CoV-2","GTCCGAACTCTACACT",4,17.9,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13T K56M N118C S129Y Q144H",5
"lib2","SARS-CoV-2","GTCCGAACTGTCGATA",1,1.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88N",1
"lib2","SARS-CoV-2","GTCCGACAGATGCTTG",2,42.84,9.06,-1.78,0.06,2.98,1.05,0,">1 nonsynonymous","K128R Q168L",2
"lib2","SARS-CoV-2","GTCCGACATCTTGGTT",9,141.46,10.75,-0.09,0.05,2.95,1.06,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","GTCCGACATGACAAGA",5,82.13,10.86,0.02,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCGACGCAGATACG",3,0.02,NA,NA,NA,NA,NA,NA,"stop","D34* F62K",2
"lib2","SARS-CoV-2","GTCCGACTGAAGGTTC",2,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C K87G N92L",3
"lib2","SARS-CoV-2","GTCCGAGAAAACAACC",5,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W T15Y L60P F99D C158Y",5
"lib2","SARS-CoV-2","GTCCGAGAAATAGCAA",10,234.94,10.59,-0.25,0.03,2.91,1.05,0,"1 nonsynonymous","Y123C",1
"lib2","SARS-CoV-2","GTCCGAGAACCCGATC",3,10.26,6,-4.84,2,3,1.02,0,">1 nonsynonymous","P96C I104R Q176M",3
"lib2","SARS-CoV-2","GTCCGAGACATAAAGC",5,69.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P82N E135P",2
"lib2","SARS-CoV-2","GTCCGAGCACATCCTG",14,211.36,10.72,-0.11,0.03,2.98,1.04,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","GTCCGAGCCCAGTCTA",3,53.94,7.62,-3.21,0.23,1.5,1.12,0.01,">1 nonsynonymous","W23E G196L T201F",3
"lib2","SARS-CoV-2","GTCCGAGTTAGAATAA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","N1M F8D D59A Y119*",4
"lib2","SARS-CoV-2","GTCCGATAAACTAATG",1,24.81,10.68,-0.15,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCGATATAGAAAAC",1,23.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T85K W106K F134I P169I",4
"lib2","SARS-CoV-2","GTCCGATCGTGAATCA",1,39.46,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S43N E76T R136A",3
"lib2","SARS-CoV-2","GTCCGATGAAAGCCGA",5,0.15,NA,NA,NA,NA,NA,NA,"stop","T15S A67S F99* E141V",4
"lib2","SARS-CoV-2","GTCCGATGTTCCGAAA",4,77.92,10.65,-0.19,0.04,2.92,1.07,0,"1 nonsynonymous","F160G",1
"lib2","SARS-CoV-2","GTCCGCACAGATGGGC",1,78,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F12R V37C W106L V115K T170M",5
"lib2","SARS-CoV-2","GTCCGCAGAACTACAG",5,78.6,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y91T Y143K N171T",3
"lib2","SARS-CoV-2","GTCCGCATACCCTATG",7,33.61,8.41,-2.42,0.08,2.92,1.01,0,">1 nonsynonymous","I138N N157R",2
"lib2","SARS-CoV-2","GTCCGCATCTTACCTT",2,7.9,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A18W A89L E141V",3
"lib2","SARS-CoV-2","GTCCGCATGTATACAG",3,31.45,10.84,0.01,0.05,3,1.02,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","GTCCGCGTAATCAAAG",7,82.34,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y35R P96M",2
"lib2","SARS-CoV-2","GTCCGCTAAAAACATA",7,25.93,6.8,-4.03,0.5,1.5,1.14,0.05,">1 nonsynonymous","G9C L57H D90S T100S F160Y",5
"lib2","SARS-CoV-2","GTCCGCTACGCCCTGA",1,8.28,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6F I28T C49I",3
"lib2","SARS-CoV-2","GTCCGCTCCAATTTCA",2,17.32,10.77,-0.07,0.08,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCGCTCGCAGTTTT",5,82.25,9.72,-1.11,0.06,2.23,1.04,0,">1 nonsynonymous","S43C P54S G146W",3
"lib2","SARS-CoV-2","GTCCGCTGCCTATAAT",2,15.95,10.58,-0.26,0.1,2.77,1.16,0,">1 nonsynonymous","A33M A105S",2
"lib2","SARS-CoV-2","GTCCGGAACGTATGAC",5,386.9,8.2,-2.64,0.12,2.23,1.03,0.01,">1 nonsynonymous","Y35T Y175C",2
"lib2","SARS-CoV-2","GTCCGGAAGTAGTTGG",7,39.24,6.18,-4.65,0.67,1.5,1.17,0.02,">1 nonsynonymous","F12S Y35W V77R",3
"lib2","SARS-CoV-2","GTCCGGAGAGATGTAA",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A N118A",2
"lib2","SARS-CoV-2","GTCCGGATAAAGGAAA",2,14.28,10.45,-0.38,0.09,2.91,1.06,0,"1 nonsynonymous","L162M",1
"lib2","SARS-CoV-2","GTCCGGCTAGTCTACC",2,65.13,10.83,0,0.06,3,1.01,0,">1 nonsynonymous","G9N S43R D97I Y178N",4
"lib2","SARS-CoV-2","GTCCGGGTATCTTGTA",6,0.84,NA,NA,NA,NA,NA,NA,"stop","C6F N157*",2
"lib2","SARS-CoV-2","GTCCGGTCGCGTATTC",2,10.5,10.84,0,0.09,2.85,1.17,0,">1 nonsynonymous","C61E K132R V173I",3
"lib2","SARS-CoV-2","GTCCGGTTCATGTTTT",5,62.29,10.99,0.16,0.12,2.83,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTCCGGTTTGACTATC",16,270.92,8.44,-2.4,0.08,2.22,1.06,0,">1 nonsynonymous","F17Y G117P",2
"lib2","SARS-CoV-2","GTCCGTAACACAGTAA",1,7.92,9.6,-1.24,0.42,1.5,1,0.05,">1 nonsynonymous","F47Y V71Q D90Y",3
"lib2","SARS-CoV-2","GTCCGTACAAATCAAT",3,50.42,10.86,0.03,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCGTACCTTAGACA",2,14.16,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12V N30G S53F L60C G86H",5
"lib2","SARS-CoV-2","GTCCGTATAGGCATCA",5,113.86,10.75,-0.09,0.04,2.97,1.04,0,"1 nonsynonymous","R78P",1
"lib2","SARS-CoV-2","GTCCGTATATGAACTT",22,58.2,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C49R D112M L122K T201I",4
"lib2","SARS-CoV-2","GTCCGTATTGAATGTA",2,86.31,10.41,-0.42,0.04,2.9,1.06,0,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","GTCCGTCAGAATAAAG",1,32.91,10.68,-0.15,0.07,2.97,1.02,0.01,">1 nonsynonymous","R16Y K56I",2
"lib2","SARS-CoV-2","GTCCGTTCGAATTCGA",18,131.97,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G101M G116T S129N K198Q",4
"lib2","SARS-CoV-2","GTCCGTTTATAAATTA",2,9.71,9.27,-1.56,0.31,1.5,1.07,0.05,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","GTCCGTTTGAACTGAG",5,95.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M T55S V173T",3
"lib2","SARS-CoV-2","GTCCTAAAATAGTAAC",5,71.47,9.2,-1.63,0.06,2.88,1.1,0,">1 nonsynonymous","S41M Y119A",2
"lib2","SARS-CoV-2","GTCCTAAAGTAAACAA",10,40.36,6,-4.84,2,2.08,1.24,0,">1 nonsynonymous","S19Q K48E I72M K87T I88T",5
"lib2","SARS-CoV-2","GTCCTAAATGCACAGT",4,33.76,9.91,-0.93,0.11,2.19,1,0,">1 nonsynonymous","T85K I104S F160C",3
"lib2","SARS-CoV-2","GTCCTAAGTGGTTAAA",4,17.89,6.6,-4.24,0.33,2.47,1.13,0.01,">1 nonsynonymous","P82M C150Q V173Y",3
"lib2","SARS-CoV-2","GTCCTAATTGCGCTAC",4,0.45,NA,NA,NA,NA,NA,NA,"stop","G83*",1
"lib2","SARS-CoV-2","GTCCTACAGATTTCAA",9,4.79,NA,NA,NA,NA,NA,NA,"stop","F70Q G86K P96* R127S V181I",5
"lib2","SARS-CoV-2","GTCCTACATAAATATC",10,4.03,NA,NA,NA,NA,NA,NA,"stop","L57I G86* N107S",3
"lib2","SARS-CoV-2","GTCCTACTCTCCCATG",3,15.06,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A14L L95P G116T R136E Q144I",5
"lib2","SARS-CoV-2","GTCCTACTGTGAACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I2P A33P V71I D97M G117* Y123*",6
"lib2","SARS-CoV-2","GTCCTAGAGTCATATG",2,72.04,8.65,-2.19,0.09,2.52,1.08,0,">1 nonsynonymous","S108H P197T",2
"lib2","SARS-CoV-2","GTCCTAGAGTTCTAAT",2,52.37,9.95,-0.89,0.07,2.47,1.01,0,">1 nonsynonymous","V37C F62S G83Y V115S",4
"lib2","SARS-CoV-2","GTCCTAGGACAAAATC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","Y39L G101I D137*",3
"lib2","SARS-CoV-2","GTCCTAGTACACTGCA",9,4.1,NA,NA,NA,NA,NA,NA,"stop","V32P Y119* P177R",3
"lib2","SARS-CoV-2","GTCCTATAAGTATACC",1,16.02,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6L L60S C150F",3
"lib2","SARS-CoV-2","GTCCTATACGATCCAA",2,45.08,10.59,-0.25,0.05,2.96,1,0,">1 nonsynonymous","D90T S139T",2
"lib2","SARS-CoV-2","GTCCTATACTGTATAC",3,25.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A105R Q168K",2
"lib2","SARS-CoV-2","GTCCTATATTAAGTCA",4,29.56,8.81,-2.02,0.13,2.71,1.24,0.01,">1 nonsynonymous","P54M N64Y D98V T170E",4
"lib2","SARS-CoV-2","GTCCTATGCCTAATTA",10,58.19,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V37F P82K F126P Y143I",4
"lib2","SARS-CoV-2","GTCCTCAACTTAAACA",3,37.23,10.67,-0.17,0.05,2.88,1.1,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","GTCCTCAAGACACATC",2,57.15,10.56,-0.27,0.04,2.91,1.09,0,"1 nonsynonymous","N58V",1
"lib2","SARS-CoV-2","GTCCTCACTACGAACA",5,44.67,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50V L57Y D98I",3
"lib2","SARS-CoV-2","GTCCTCCAACAAACCT",17,178.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86S Q176L",2
"lib2","SARS-CoV-2","GTCCTCCCGTTTACAA",3,1.2,NA,NA,NA,NA,NA,NA,"stop","N4I N13I W23S K56I V103*",5
"lib2","SARS-CoV-2","GTCCTCCCTCTGCCGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129T",1
"lib2","SARS-CoV-2","GTCCTCCTAGGGCCGG",11,91.2,10.07,-0.76,0.06,2.5,1.04,0,">1 nonsynonymous","A14D Q84K E141G",3
"lib2","SARS-CoV-2","GTCCTCGAACTATTCG",3,31.14,8.23,-2.6,0.08,2.89,1.14,0,">1 nonsynonymous","K48L N171R",2
"lib2","SARS-CoV-2","GTCCTCGAATTCCTAG",1,7.39,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C61F K87R P96I W106G N120T",5
"lib2","SARS-CoV-2","GTCCTCTCAAAAATCC",1,1.29,NA,NA,NA,NA,NA,NA,"stop","D98T L125M S129N L131*",4
"lib2","SARS-CoV-2","GTCCTCTCTTCTCCGG",2,88.94,8.54,-2.29,0.16,1.82,1.16,0.01,">1 nonsynonymous","V32L S45N Q176L",3
"lib2","SARS-CoV-2","GTCCTGACAAATACTC",25,420.86,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F126S G166T",2
"lib2","SARS-CoV-2","GTCCTGCAACGGATAC",1,31.25,9.91,-0.93,0.11,2.58,1.06,0.01,">1 nonsynonymous","N1C R16I R27P",3
"lib2","SARS-CoV-2","GTCCTGCCAACAGAAA",1,46.24,7.78,-3.06,0.12,1.87,1.07,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","GTCCTGGACAAAAGTC",1,20.08,6,-4.84,1.99,3,1.03,0,">1 nonsynonymous","W23V S29K V77T V153P H189A",5
"lib2","SARS-CoV-2","GTCCTGGATGCGCTTA",4,86.33,10.35,-0.49,0.04,2.87,1.04,0,">1 nonsynonymous","N1P Q84Y N130V",3
"lib2","SARS-CoV-2","GTCCTGGCGGGACCAT",9,61.52,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D68E D137C",2
"lib2","SARS-CoV-2","GTCCTGGTGGAAATCC",1,15.1,9.64,-1.2,0.14,2.7,1.12,0.01,"1 nonsynonymous","G155F",1
"lib2","SARS-CoV-2","GTCCTGTAAACCTAGG",5,1.07,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","GTCCTGTTCACAGTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","P54S Y93G T170*",3
"lib2","SARS-CoV-2","GTCCTGTTTTATGGGA",10,117.08,8.31,-2.53,0.1,2.2,1.07,0,">1 nonsynonymous","V65C Y119P P133Y",3
"lib2","SARS-CoV-2","GTCCTTAGAGGTCTTT",8,48.2,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","V103Y S200T",2
"lib2","SARS-CoV-2","GTCCTTAGTAGAGAAC",9,133.42,8.24,-2.59,0.18,2.03,1.08,0.01,">1 nonsynonymous","G9T S129F Y143A Y178H",4
"lib2","SARS-CoV-2","GTCCTTAGTTGGCCTT",5,98.24,10.6,-0.24,0.04,2.88,1.1,0,">1 nonsynonymous","K26Y K114S",2
"lib2","SARS-CoV-2","GTCCTTCCGGCTCAAA",9,125.22,10.82,-0.02,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCTTCTATGAAGAT",4,56.78,10.72,-0.11,0.1,2.82,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCCTTGAATGAAAAC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","F62Y K94I L122C R179*",4
"lib2","SARS-CoV-2","GTCCTTGGGAAACCGG",9,156.86,11.06,0.22,0.05,2.91,1.1,0,"1 nonsynonymous","Q163Y",1
"lib2","SARS-CoV-2","GTCCTTTAAACATTGT",7,54.13,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","GTCCTTTTGTCTATAG",5,147.44,9.02,-1.82,0.04,2.86,1.07,0,"1 nonsynonymous","R73G",1
"lib2","SARS-CoV-2","GTCCTTTTTGTTGGCA",5,24.26,7.46,-3.38,0.28,1.73,1.14,0.02,">1 nonsynonymous","E10W G117R S147W S164R",4
"lib2","SARS-CoV-2","GTCGAAACTAGGCACC",9,128.16,9.49,-1.35,0.07,1.82,1.1,0,">1 nonsynonymous","V37C L95M Y123L",3
"lib2","SARS-CoV-2","GTCGAAAGGGCCCGAG",8,62.79,8.86,-1.98,0.12,2.24,1.08,0.01,">1 nonsynonymous","D97F N151I P169A S200W",4
"lib2","SARS-CoV-2","GTCGAACAGAAAAACC",1,7.83,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y91H Q144Y G174T",3
"lib2","SARS-CoV-2","GTCGAACCCGTAAGGC",14,241.97,10.67,-0.16,0.04,2.94,1.06,0,"1 nonsynonymous","L122D",1
"lib2","SARS-CoV-2","GTCGAAGAGGTACCAC",1,12.76,10.78,-0.06,0.09,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCGAAGGCCATTAGA",3,13.21,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G117C R127P Y165H",3
"lib2","SARS-CoV-2","GTCGAATTTCCAAATC",4,33.13,8.24,-2.6,0.42,1.5,1.21,0.07,">1 nonsynonymous","S41P R127T T201H",3
"lib2","SARS-CoV-2","GTCGACAACCGTCAAT",3,36.45,8.44,-2.39,0.11,3,1.06,0,">1 nonsynonymous","D75V K87E",2
"lib2","SARS-CoV-2","GTCGACAAGCAAAACC",2,43.19,10.12,-0.71,0.08,2.75,1,0.01,">1 nonsynonymous","G83V S129N P149N",3
"lib2","SARS-CoV-2","GTCGACAATTAATCTT",3,33.5,6.05,-4.79,0.7,1.5,1.1,0.01,">1 nonsynonymous","Y39T T63K G86T F99T E141P",5
"lib2","SARS-CoV-2","GTCGACATACAAATTC",4,13.03,10.51,-0.33,0.11,3,1.01,0.01,"synonymous","",0
"lib2","SARS-CoV-2","GTCGACATGACTAATT",1,11.22,10.8,-0.04,0.06,3,1,0,">1 nonsynonymous","G9C S43R T201G",3
"lib2","SARS-CoV-2","GTCGACGGTCCGCGAC",6,145.26,8.74,-2.1,0.07,2.85,1.04,0,">1 nonsynonymous","C6D C61K G174V",3
"lib2","SARS-CoV-2","GTCGACTATATACCAA",13,194.55,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","G9C I28A V71S Y119T N151L",5
"lib2","SARS-CoV-2","GTCGACTGATTATCAT",8,63.3,10.75,-0.09,0.06,2.96,1.07,0,"1 nonsynonymous","N1I",1
"lib2","SARS-CoV-2","GTCGAGAATGATAGGC",9,136.74,10.77,-0.07,0.03,2.97,1.05,0,">1 nonsynonymous","I2A F62S",2
"lib2","SARS-CoV-2","GTCGAGATATACTCCC",8,0.98,NA,NA,NA,NA,NA,NA,"stop","D97W C102*",2
"lib2","SARS-CoV-2","GTCGAGCACCCACCAA",3,64.28,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A33R G86I L125A T140C",4
"lib2","SARS-CoV-2","GTCGAGCACTAACAAA",2,27.85,10.74,-0.1,0.06,2.99,1.02,0,">1 nonsynonymous","C61V I104Y I142L",3
"lib2","SARS-CoV-2","GTCGAGGACCAGAATG",4,0.7,NA,NA,NA,NA,NA,NA,"stop","T15I S43R A105I E154*",4
"lib2","SARS-CoV-2","GTCGATAAAATTTTGA",8,26.44,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G9L R25T L60C S139Y L187H",5
"lib2","SARS-CoV-2","GTCGATAAAGGATGAT",6,160.34,10.16,-0.68,0.05,2.69,1.1,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","GTCGATAGATCTACAA",4,38.16,10.81,-0.03,0.04,3,1.02,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","GTCGATAGCAGATAAA",4,34.82,9.33,-1.5,0.23,1.5,1.05,0.02,">1 nonsynonymous","C6L W106R",2
"lib2","SARS-CoV-2","GTCGATAGTCGCTTAA",2,65.12,9.35,-1.48,0.08,1.86,1.06,0,">1 nonsynonymous","G51R A89Y",2
"lib2","SARS-CoV-2","GTCGATATTTCGCGCT",7,48.47,6,-4.84,2,2.64,1.21,0,">1 nonsynonymous","N40V I88Y F99I F134L T201W",5
"lib2","SARS-CoV-2","GTCGATCCACAGTTTG",8,146.53,10.8,-0.04,0.05,2.89,1.07,0,"1 nonsynonymous","Q84V",1
"lib2","SARS-CoV-2","GTCGATCTAAATCGTG",4,0.23,NA,NA,NA,NA,NA,NA,"stop","S41E C61L G86* W106G",4
"lib2","SARS-CoV-2","GTCGATGAGAACAAAA",16,9.57,NA,NA,NA,NA,NA,NA,"stop","L38* S43Y",2
"lib2","SARS-CoV-2","GTCGATTACCATGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","F62L G101V K128*",3
"lib2","SARS-CoV-2","GTCGATTACCTGAGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L N120T N130V Y143N H189C",5
"lib2","SARS-CoV-2","GTCGATTTGCCACCGT",8,165.65,8.81,-2.02,0.06,2.96,1.08,0,">1 nonsynonymous","Q84R L125E",2
"lib2","SARS-CoV-2","GTCGCAAACTGTGAGT",10,24.57,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G9T S41V A81V C102N",4
"lib2","SARS-CoV-2","GTCGCAAAGCTCACGG",14,350.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86T Y175K",2
"lib2","SARS-CoV-2","GTCGCAATAACCGGGT",4,2.19,NA,NA,NA,NA,NA,NA,"stop","W106T L131M I138* V180E",4
"lib2","SARS-CoV-2","GTCGCAATGGCAATCT",4,38.08,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S29C F70T V77G P96D S113P T201K",6
"lib2","SARS-CoV-2","GTCGCACAAAAGCTCT",6,42.73,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","T3L G86V N92K I104K F167S",5
"lib2","SARS-CoV-2","GTCGCACACAAAAGAT",14,2.15,NA,NA,NA,NA,NA,NA,"stop","T63* Q84L G116D V180I",4
"lib2","SARS-CoV-2","GTCGCACGCTGGTGCA",2,11.61,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","C49F N107S Y119F P149F L162W",5
"lib2","SARS-CoV-2","GTCGCACGTCACCACC",7,28.13,10.48,-0.36,0.11,2.77,1.09,0.01,"1 nonsynonymous","L111R",1
"lib2","SARS-CoV-2","GTCGCAGAAAAAGAAT",3,22.26,9.48,-1.36,0.16,1.76,1.17,0.01,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","GTCGCAGATTCAAAAG",3,46.88,10.28,-0.56,0.06,2.9,1.06,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","GTCGCATAAAGTGAAG",9,143.4,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S69V G83I D90S A105T G116A",5
"lib2","SARS-CoV-2","GTCGCATTAAATAACA",1,18.03,9.92,-0.92,0.16,2.58,1.01,0.01,">1 nonsynonymous","N30Q S41M N64R P149L L187I",5
"lib2","SARS-CoV-2","GTCGCCACGATGATTA",17,92.3,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y93S G101L I142F",3
"lib2","SARS-CoV-2","GTCGCCGAATCCATCC",10,1.4,NA,NA,NA,NA,NA,NA,"stop","N120Q F167*",2
"lib2","SARS-CoV-2","GTCGCCGTAAGCAGGA",1,25.87,10.24,-0.6,0.13,2.56,1.1,0.01,"1 nonsynonymous","D34V",1
"lib2","SARS-CoV-2","GTCGCCTAAAGAAGCT",17,4.5,NA,NA,NA,NA,NA,NA,"stop","P54F E76S L95G Y175*",4
"lib2","SARS-CoV-2","GTCGCCTTGTCACAAC",6,21.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F99P V115W T201V",3
"lib2","SARS-CoV-2","GTCGCGAAAGGTATCG",5,41.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y21E S29R Y50D A145S",4
"lib2","SARS-CoV-2","GTCGCGGGAATGCAGA",2,12.06,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","E76K S113F N120R R136I V173I",5
"lib2","SARS-CoV-2","GTCGCTAAAACCAGAG",1,36.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2R S36L D68E N120L",4
"lib2","SARS-CoV-2","GTCGCTAAAATAAATG",9,65.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A42K P82M G86F Q163S",4
"lib2","SARS-CoV-2","GTCGCTACACCCATTA",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R D59A",2
"lib2","SARS-CoV-2","GTCGCTATATCTTGTC",2,76.11,8.9,-1.93,0.08,2.87,1.11,0,">1 nonsynonymous","D97L N120P E141S",3
"lib2","SARS-CoV-2","GTCGCTCATTCGCACA",3,0.67,NA,NA,NA,NA,NA,NA,"stop","C6V A14F G152* C158N",4
"lib2","SARS-CoV-2","GTCGCTCCCAGGCACA",4,54.31,9.79,-1.04,0.12,2.12,1.01,0.01,">1 nonsynonymous","C6L T15G",2
"lib2","SARS-CoV-2","GTCGCTCTGGTATCAG",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42K P82R W106S",3
"lib2","SARS-CoV-2","GTCGCTCTGTTACCAC",7,0.41,NA,NA,NA,NA,NA,NA,"stop","A14G A18G C49L K94T S113M L122K K128M G174*",8
"lib2","SARS-CoV-2","GTCGCTCTTTGACCGA",6,27.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G F99E K114F Y121S Q144R",5
"lib2","SARS-CoV-2","GTCGCTGGTCCTATTA",3,47.88,9.31,-1.53,0.1,2.05,1.04,0.01,">1 nonsynonymous","C31I F185V",2
"lib2","SARS-CoV-2","GTCGGAAAAAAAAAAT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","I28M V37S P96H W106L N130*",5
"lib2","SARS-CoV-2","GTCGGAGAAGTTCGCA",18,130.51,8.96,-1.87,0.1,1.5,1.08,0,">1 nonsynonymous","G51D L57T T201N",3
"lib2","SARS-CoV-2","GTCGGAGTTCTCACTA",2,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S A42C Y165E F185K T201C",5
"lib2","SARS-CoV-2","GTCGGATTAACCCTTA",1,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85R P96L Y119T",3
"lib2","SARS-CoV-2","GTCGGCAAACAACCAT",6,0,NA,NA,NA,NA,NA,NA,"stop","Y21* I28G T148A F167R",4
"lib2","SARS-CoV-2","GTCGGCCCTAGAGAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S N58M F99Q V115L T201W",5
"lib2","SARS-CoV-2","GTCGGCGCCCAACATG",2,18.19,10.86,0.02,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCGGCTATCGGTGTA",2,70.7,10.34,-0.49,0.05,2.86,1.13,0,">1 nonsynonymous","V115E I138G",2
"lib2","SARS-CoV-2","GTCGGCTGATTCATTT",6,94.83,10.33,-0.5,0.04,2.85,1.07,0,">1 nonsynonymous","S129L V173N",2
"lib2","SARS-CoV-2","GTCGGGGAGTTGGGCT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P S53F V115C P169V",4
"lib2","SARS-CoV-2","GTCGGGGCTATTTTTT",3,44.97,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6V P96L I138V V153L Y165T Q176R",6
"lib2","SARS-CoV-2","GTCGGGTACAAACCTA",3,23.05,10.94,0.1,0.09,2.88,1.15,0,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","GTCGGGTCCCATCTAC",5,6.19,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","D90C G101R",2
"lib2","SARS-CoV-2","GTCGGTAAAAGTATTG",10,92.93,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","Y143P P149C",2
"lib2","SARS-CoV-2","GTCGGTACTGCTACTC",8,181.98,10.35,-0.49,0.03,2.92,1.04,0,">1 nonsynonymous","Y39P T63L",2
"lib2","SARS-CoV-2","GTCGGTCGATTATATA",2,13.63,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","I2R R25L",2
"lib2","SARS-CoV-2","GTCGGTGACACAAAGT",5,71.79,10.99,0.15,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCGTAAAAATTCTGT",1,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10M T15F P82Y N107L L122S T201Y",6
"lib2","SARS-CoV-2","GTCGTAAGTCAGACAG",1,6.14,9.84,-1,0.21,2.9,1.28,0.01,">1 nonsynonymous","A42Y S129T G155C",3
"lib2","SARS-CoV-2","GTCGTAATAAACGCCT",2,81.12,10.78,-0.05,0.03,2.99,1.04,0,">1 nonsynonymous","T140N P191S",2
"lib2","SARS-CoV-2","GTCGTATATAAAAGAA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","GTCGTCAAATTACCAG",22,3.19,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","GTCGTCAATTAAAACG",2,90.9,9.08,-1.75,0.05,2.93,1.06,0,">1 nonsynonymous","P54I F167W",2
"lib2","SARS-CoV-2","GTCGTCAATTAAAGCA",11,246.42,11.07,0.24,0.05,2.94,1.07,0,">1 nonsynonymous","G9S L122K",2
"lib2","SARS-CoV-2","GTCGTCATGCCTAGGA",1,0.3,NA,NA,NA,NA,NA,NA,"stop","N1R E10A R16T P82W K94* T201N",6
"lib2","SARS-CoV-2","GTCGTCCCTCGTACAT",3,42.65,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A33Q R179W",2
"lib2","SARS-CoV-2","GTCGTCTAAGACGATT",19,341.77,9.92,-0.92,0.03,2.64,1.05,0,">1 nonsynonymous","A81S Y91M",2
"lib2","SARS-CoV-2","GTCGTCTCTAACAAAT",1,4.94,NA,NA,NA,NA,NA,NA,"stop","L5K A105I N157S T201*",4
"lib2","SARS-CoV-2","GTCGTTACAAAGGAAC",8,0.03,NA,NA,NA,NA,NA,NA,"stop","F8* G116F E135C",3
"lib2","SARS-CoV-2","GTCGTTACGACCATAG",7,34.29,7.43,-3.41,0.35,1.5,1.01,0.05,">1 nonsynonymous","G86L F99L V173N",3
"lib2","SARS-CoV-2","GTCGTTAGCTGTGACC",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D A81V W106E",3
"lib2","SARS-CoV-2","GTCGTTATAAAAATGT",15,165.55,9.99,-0.84,0.04,2.62,1.04,0,">1 nonsynonymous","A42T I104S",2
"lib2","SARS-CoV-2","GTCGTTATAATCTTCG",2,5.81,NA,NA,NA,NA,NA,NA,"stop","S69* K198L",2
"lib2","SARS-CoV-2","GTCGTTATTTTTACGA",2,56.61,7.99,-2.85,0.21,1.58,1.12,0.02,">1 nonsynonymous","C49T Y119P",2
"lib2","SARS-CoV-2","GTCGTTCCACAGGTGA",1,6.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63K G117S",2
"lib2","SARS-CoV-2","GTCGTTGAATTTGGGA",1,16.08,9.56,-1.28,0.15,1.98,1.05,0.01,">1 nonsynonymous","R27V S45T N92S V153G",4
"lib2","SARS-CoV-2","GTCGTTTGAGGTAGCA",12,161.44,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9F G86A S113L C158R",4
"lib2","SARS-CoV-2","GTCTAAAAAAAATCAA",12,0.72,NA,NA,NA,NA,NA,NA,"stop","Y91A D98E T140K Y175*",4
"lib2","SARS-CoV-2","GTCTAAAAACAGGAAG",7,135.43,9.85,-0.99,0.07,2.2,1.04,0,">1 nonsynonymous","K56V D98F K132I",3
"lib2","SARS-CoV-2","GTCTAAAAAGTAATCG",4,37.86,10.91,0.07,0.05,2.97,1.05,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","GTCTAAAACACACCGC",7,23.51,9.6,-1.24,0.12,1.93,1.08,0.01,"1 nonsynonymous","V65E",1
"lib2","SARS-CoV-2","GTCTAAAAGATAATCT",2,12.06,10.66,-0.18,0.06,2.93,1.12,0,">1 nonsynonymous","K114L K128S",2
"lib2","SARS-CoV-2","GTCTAAAAGTCATTAC",3,57.95,7.87,-2.97,0.34,1.5,1.03,0.03,">1 nonsynonymous","R25V T100V V173G",3
"lib2","SARS-CoV-2","GTCTAAACCTATCCGA",10,37.17,6.05,-4.79,0.95,1.5,1.21,0.02,">1 nonsynonymous","Y165G E186A",2
"lib2","SARS-CoV-2","GTCTAAACGAACGTCT",5,154.99,10.67,-0.17,0.06,2.84,1.04,0,"1 nonsynonymous","S129P",1
"lib2","SARS-CoV-2","GTCTAAACTCAAAAAG",3,0.04,NA,NA,NA,NA,NA,NA,"stop","C49* Y121*",2
"lib2","SARS-CoV-2","GTCTAAAGGTATACTT",1,51.88,10.78,-0.05,0.05,2.99,1.01,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","GTCTAAATACCCTAAG",13,172.53,10.82,-0.02,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTAAATGCCAACAA",4,8.04,NA,NA,NA,NA,NA,NA,"stop","I2* A190Y",2
"lib2","SARS-CoV-2","GTCTAACAGATATTGT",3,15.11,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","P54H Y93S Q176S",3
"lib2","SARS-CoV-2","GTCTAACCATTACCCC",4,59.57,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F62H N109D P149S N171G",4
"lib2","SARS-CoV-2","GTCTAACCTTTTGATT",2,25.83,10.1,-0.74,0.06,2.85,1.03,0,">1 nonsynonymous","R16I R27T I88V G116T",4
"lib2","SARS-CoV-2","GTCTAACTGAATGACA",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I S36L F70E",3
"lib2","SARS-CoV-2","GTCTAACTGATAGAAT",4,15.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F17K G86R D90R V103D G174A",5
"lib2","SARS-CoV-2","GTCTAACTGTCATCAA",5,37.99,8.46,-2.37,0.09,2.97,1,0,">1 nonsynonymous","F17W G152Q N157K",3
"lib2","SARS-CoV-2","GTCTAAGATCCGTGGC",12,97.72,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V71A Y91P",2
"lib2","SARS-CoV-2","GTCTAATAAAAAAGTT",5,106.11,10.23,-0.6,0.02,2.94,1.05,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","GTCTAATAAACCCCTG",2,1.99,NA,NA,NA,NA,NA,NA,"stop","A89R P96* I104V A105G F156T R179G",6
"lib2","SARS-CoV-2","GTCTAATACAGAATAA",5,88.8,7.32,-3.52,0.17,1.65,1.1,0.01,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","GTCTAATATTAACCAT",7,6.91,7.94,-2.9,0.12,3,1.03,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","GTCTAATCACTCCAGG",2,2.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I L122M",2
"lib2","SARS-CoV-2","GTCTAATGATACACTT",3,40.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D34V S43K L95C G152T G166H",5
"lib2","SARS-CoV-2","GTCTAATGATACCATA",7,118.39,10.81,-0.03,0.06,2.83,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTAATTCTCTCTTT",2,17.64,6.34,-4.49,0.37,2.37,1.1,0,">1 nonsynonymous","F8G Y91C V181I",3
"lib2","SARS-CoV-2","GTCTAATTGTAAGACT",2,1.32,NA,NA,NA,NA,NA,NA,"stop","F8K R16Y D90L D137* Y143P L183F",6
"lib2","SARS-CoV-2","GTCTACACACTTTGAG",7,67.01,6.37,-4.47,0.79,1.5,1.28,0.04,">1 nonsynonymous","T15Y F134T G166L",3
"lib2","SARS-CoV-2","GTCTACAGATAGCGCT",8,0,NA,NA,NA,NA,NA,NA,"stop","K48Y L60E F99V A105V V153*",5
"lib2","SARS-CoV-2","GTCTACATAAAAGAAT",4,100.13,10.84,0.01,0.03,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTACATAGGAAAGC",2,84.31,10.73,-0.1,0.09,2.72,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTACATAGGCCGCA",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C158S F185S",2
"lib2","SARS-CoV-2","GTCTACCCCCGATGAA",3,10.95,9.75,-1.09,0.1,2.66,1.22,0.01,"1 nonsynonymous","D34F",1
"lib2","SARS-CoV-2","GTCTACCTCCGTTACG",1,1.63,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","GTCTACGATTCGAACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G Y35G F47I V77Y K87F L95T N107C C150G",8
"lib2","SARS-CoV-2","GTCTACGCGAAGAACC",4,32.11,10.6,-0.23,0.03,2.95,1.05,0,">1 nonsynonymous","Y39L P149L V180I",3
"lib2","SARS-CoV-2","GTCTACGGGTGTGACA",1,6.28,9.07,-1.77,0.09,2.02,1,0,">1 nonsynonymous","N13K N58L V115A A145M",4
"lib2","SARS-CoV-2","GTCTACGTTATTTGGA",5,48.86,9.44,-1.4,0.17,2.57,1.16,0.01,">1 nonsynonymous","A42F S113G N120Y E154S",4
"lib2","SARS-CoV-2","GTCTACTAATAGCATT",2,44.82,6.59,-4.24,0.47,1.81,1.24,0.03,">1 nonsynonymous","Y123L Y175V",2
"lib2","SARS-CoV-2","GTCTACTGCCAGAACC",1,91.25,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","K132S P177Y",2
"lib2","SARS-CoV-2","GTCTACTTCTATACTA",4,63.83,10.54,-0.29,0.06,2.9,1.08,0,"1 nonsynonymous","G155M",1
"lib2","SARS-CoV-2","GTCTAGAAAATGTTTA",7,143.13,10.78,-0.06,0.03,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTAGACACAGAATC",5,90.72,10.6,-0.24,0.04,2.94,1.07,0,"1 nonsynonymous","L60D",1
"lib2","SARS-CoV-2","GTCTAGACTCCACTCA",1,0.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P D90N F167T",3
"lib2","SARS-CoV-2","GTCTAGAGTCAGACCC",4,27.38,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","E76T N120R D137W G174D",4
"lib2","SARS-CoV-2","GTCTAGATCAATGTAT",15,26.47,6,-4.84,2,1.5,1.24,0.02,"1 nonsynonymous","I104E",1
"lib2","SARS-CoV-2","GTCTAGATGTACATTG",1,12.65,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Q84T W106R S113P",3
"lib2","SARS-CoV-2","GTCTAGGAATACGTTG",13,174.8,10.41,-0.43,0.03,2.92,1.06,0,">1 nonsynonymous","S36C C61K",2
"lib2","SARS-CoV-2","GTCTAGGTCTCCCCGT",2,41.75,10.27,-0.57,0.07,3,1.03,0,">1 nonsynonymous","Y35F S41G K114T N120W",4
"lib2","SARS-CoV-2","GTCTAGTCAATAACTC",8,97.8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y39T S45H N92W",3
"lib2","SARS-CoV-2","GTCTAGTCAATATAAC",1,6.67,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","K48C N64L D112Y Y119G",4
"lib2","SARS-CoV-2","GTCTAGTGCAGGGCGT",6,37.08,10.62,-0.22,0.08,2.88,1.11,0,"1 nonsynonymous","Q144R",1
"lib2","SARS-CoV-2","GTCTATAAACACTTAG",6,33.75,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V20K G174E",2
"lib2","SARS-CoV-2","GTCTATAAAGATTTTA",11,204.57,10.79,-0.04,0.03,2.98,1.02,0,">1 nonsynonymous","K26M K199V",2
"lib2","SARS-CoV-2","GTCTATAACGTCAACC",3,28.19,7.31,-3.52,0.44,1.5,1.02,0.05,">1 nonsynonymous","F167W V181G",2
"lib2","SARS-CoV-2","GTCTATACTGCAAATA",3,21.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58A V77E N110K",3
"lib2","SARS-CoV-2","GTCTATACTTCAACGG",2,8.52,6.22,-4.62,2,1.5,1.07,0.03,">1 nonsynonymous","L5F S19Y N30A T170M A192L",5
"lib2","SARS-CoV-2","GTCTATAGGCAATTAC",4,124.06,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C61A T85C Y119C S139H P161F P177S",6
"lib2","SARS-CoV-2","GTCTATATAAATACAC",2,7.25,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","W23V D75G",2
"lib2","SARS-CoV-2","GTCTATATAGATTTCC",7,63.33,11.07,0.24,0.07,2.96,1.05,0,">1 nonsynonymous","Y35W L60Y",2
"lib2","SARS-CoV-2","GTCTATATCCCAAATA",8,45.63,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","N4C G51Y A81H G101W Y119L C158K",6
"lib2","SARS-CoV-2","GTCTATATCTGACTGA",7,80.33,8.63,-2.2,0.07,2.8,1.06,0,">1 nonsynonymous","Y143S A190E",2
"lib2","SARS-CoV-2","GTCTATCACAGTACCA",5,31.75,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","L95W",1
"lib2","SARS-CoV-2","GTCTATCGAGTTCCAA",5,17.23,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","S41M F62L R127S R179L",4
"lib2","SARS-CoV-2","GTCTATCTACTAAACA",5,80.21,10.8,-0.04,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTATCTGTTCTCAG",4,0.1,NA,NA,NA,NA,NA,NA,"stop","N1Q L38* D97M R179D",4
"lib2","SARS-CoV-2","GTCTATGAAGGCCATC",6,62.56,10.87,0.03,0.05,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCTATGACAAGGACT",2,40.62,8.8,-2.04,0.34,1.5,1,0.05,">1 nonsynonymous","S53L P133R S164F",3
"lib2","SARS-CoV-2","GTCTATTAATATGTTG",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L95T T100Y",3
"lib2","SARS-CoV-2","GTCTATTCAAATAGAA",1,17.24,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S19W S29R V52A Y91N",4
"lib2","SARS-CoV-2","GTCTATTCCTTCACGA",6,29.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100G Y121A D137L",3
"lib2","SARS-CoV-2","GTCTATTCTTTTGCAA",1,13.78,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","P54C S69I P82T G166D",4
"lib2","SARS-CoV-2","GTCTATTGGCCCATGT",8,41.79,9.87,-0.96,0.14,2.08,1.05,0.01,">1 nonsynonymous","Y35M Y50R K198G",3
"lib2","SARS-CoV-2","GTCTATTTAAACCCAA",1,21.33,11.04,0.2,0.07,2.9,1.1,0,">1 nonsynonymous","S53E T85K",2
"lib2","SARS-CoV-2","GTCTATTTCTCTAACC",2,75.21,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A14C S113L",2
"lib2","SARS-CoV-2","GTCTCAAAAACAATGT",1,20.45,6,-4.84,2,3,1.1,0,"1 nonsynonymous","Y159T",1
"lib2","SARS-CoV-2","GTCTCAAAAGCATGAT",1,5.68,11.06,0.22,0.11,3,1.01,0,">1 nonsynonymous","D59K T100L",2
"lib2","SARS-CoV-2","GTCTCAAAAGGATTCC",5,43.34,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A81K N92L N157Y",3
"lib2","SARS-CoV-2","GTCTCAAACAACGATT",8,12.18,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","L5W V11Y P96H Y121T",4
"lib2","SARS-CoV-2","GTCTCAAACAACGCGT",7,41.57,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19Q S36F T63G P96S K198P",5
"lib2","SARS-CoV-2","GTCTCAAAGAAAATCG",4,6.07,10.85,0.02,0.24,2.69,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTCTCAAAGAAGGGGA",2,17.38,8.07,-2.76,0.3,1.61,1.14,0.03,">1 nonsynonymous","G9L L57V L162M",3
"lib2","SARS-CoV-2","GTCTCAAAGCGATAAG",2,99.28,10.83,0,0.04,2.97,1.04,0,">1 nonsynonymous","I138V K199W",2
"lib2","SARS-CoV-2","GTCTCAACGCGAGCGG",13,230.59,8.02,-2.82,0.12,2.31,1.07,0.01,">1 nonsynonymous","R78C G146P",2
"lib2","SARS-CoV-2","GTCTCAAGCAGCAATA",6,36.16,10.93,0.09,0.08,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCTCAATATGAATAC",3,58.68,8.01,-2.83,0.16,1.64,1.07,0.01,">1 nonsynonymous","S53F T85G N157M",3
"lib2","SARS-CoV-2","GTCTCAATCTACCAAA",6,0.56,NA,NA,NA,NA,NA,NA,"stop","F12N D112* Y178P",3
"lib2","SARS-CoV-2","GTCTCACACCAGAGCA",4,147.14,10.56,-0.28,0.05,2.86,1.1,0,"1 nonsynonymous","Y178T",1
"lib2","SARS-CoV-2","GTCTCACACGGTGTAG",2,75.57,10.72,-0.11,0.04,2.91,1.08,0,"1 nonsynonymous","E141G",1
"lib2","SARS-CoV-2","GTCTCACGCAATAAAC",4,12.09,8.95,-1.88,0.21,1.72,1.01,0.02,">1 nonsynonymous","T55S N64V D137E G152R",4
"lib2","SARS-CoV-2","GTCTCACGTCTCGCGA",6,70.2,10.87,0.03,0.05,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTCACTCTACGTCA",7,42.29,10.88,0.04,0.05,2.99,1.02,0,">1 nonsynonymous","V37P T55Q",2
"lib2","SARS-CoV-2","GTCTCAGAAGAATCGA",1,6.31,11.09,0.25,0.11,2.98,1.01,0.01,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","GTCTCAGCTGGAACAA",13,270.47,9.59,-1.24,0.05,2.89,1.06,0,">1 nonsynonymous","T100E L125V",2
"lib2","SARS-CoV-2","GTCTCAGTATTCTTAA",4,62.79,10.39,-0.44,0.04,2.88,1.06,0,">1 nonsynonymous","V103I E154G",2
"lib2","SARS-CoV-2","GTCTCAGTTCAATGTC",13,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L F99H",2
"lib2","SARS-CoV-2","GTCTCATATTTTAACA",1,4.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","GTCTCCAAACAGTCGA",8,33.2,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G86V S129I C150Y K198V",4
"lib2","SARS-CoV-2","GTCTCCAAACAGTTGT",10,84.1,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N92E L131M E141L",3
"lib2","SARS-CoV-2","GTCTCCACAATCTCAG",2,22.63,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N64D V103E Y123S",3
"lib2","SARS-CoV-2","GTCTCCAGCTTATTCA",4,32.5,10.82,-0.02,0.07,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTCCCCCACTATCG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S F44* L122Q Q168N Q176S T201Y",6
"lib2","SARS-CoV-2","GTCTCCCGACGTTGCA",2,15.3,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","V103A E135S Y143I",3
"lib2","SARS-CoV-2","GTCTCCCGTATGTAAA",4,17.86,9.53,-1.31,0.11,2.09,1.08,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GTCTCCCGTGCGGCTT",3,27.75,8.65,-2.19,0.17,2.03,1,0.01,">1 nonsynonymous","N64S E141A Q176L",3
"lib2","SARS-CoV-2","GTCTCCGAAACACAGA",3,90.43,10.79,-0.05,0.06,2.93,1.1,0,">1 nonsynonymous","C61R P149S",2
"lib2","SARS-CoV-2","GTCTCCGAGCATGACG",2,68.79,10.21,-0.63,0.04,2.92,1.06,0,">1 nonsynonymous","G9L A105S G146S",3
"lib2","SARS-CoV-2","GTCTCCTACGCCGACA",1,41.42,10.68,-0.15,0.04,3,1.03,0,">1 nonsynonymous","N64A T100V S129P",3
"lib2","SARS-CoV-2","GTCTCGAAACATATAA",6,89.46,10.57,-0.27,0.06,2.93,1.1,0,">1 nonsynonymous","C61T R78C",2
"lib2","SARS-CoV-2","GTCTCGAAACTGATAC",2,38.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D98A G155V Y178D",3
"lib2","SARS-CoV-2","GTCTCGAAGTTACCCA",5,39.4,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","A67S G74I A105S",3
"lib2","SARS-CoV-2","GTCTCGAATTATCTGA",5,1.71,NA,NA,NA,NA,NA,NA,"stop","L5R S36* N110V S139L T170V",5
"lib2","SARS-CoV-2","GTCTCGAGAGAGGCTT",4,47.1,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V11P G51S D90S S113P I138A Y175V",6
"lib2","SARS-CoV-2","GTCTCGCATTGACAAA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","V37L K87*",2
"lib2","SARS-CoV-2","GTCTCGGGCACCCAAT",3,12.87,9.8,-1.03,0.14,2.14,1.02,0.01,">1 nonsynonymous","I2T A89M",2
"lib2","SARS-CoV-2","GTCTCGGTTACCAAAT",1,49.31,10.91,0.07,0.06,2.89,1.1,0,">1 nonsynonymous","Y35L V173M",2
"lib2","SARS-CoV-2","GTCTCGTATTTTCCAA",6,245.76,10.92,0.08,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTCGTTAAGGCACG",6,71.1,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33E Y35N L57R N107L",4
"lib2","SARS-CoV-2","GTCTCTAAAGCGTAAG",5,26.63,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","S41F G86E K128I T201H",4
"lib2","SARS-CoV-2","GTCTCTAAGGAACCAA",2,3.29,NA,NA,NA,NA,NA,NA,"stop","D68* K94L W106Y D112G",4
"lib2","SARS-CoV-2","GTCTCTACAACAACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W F44C",2
"lib2","SARS-CoV-2","GTCTCTAGTCCACTAG",5,22.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2L R25T C61M N171D",4
"lib2","SARS-CoV-2","GTCTCTCAGAAATAAA",6,122.24,10.2,-0.64,0.04,2.84,1.08,0,"1 nonsynonymous","V77T",1
"lib2","SARS-CoV-2","GTCTCTCCAAACTAGC",2,0,NA,NA,NA,NA,NA,NA,"stop","N13F F99D A105Q G116* Y178P",5
"lib2","SARS-CoV-2","GTCTCTCGTAAATTCC",6,72.83,10.66,-0.18,0.04,3,1.04,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","GTCTCTCTAGCGGGTG",8,69.4,9.72,-1.12,0.06,1.88,1.11,0,">1 nonsynonymous","Y50T E141S",2
"lib2","SARS-CoV-2","GTCTCTCTGGTTCTCA",1,9.65,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V11L Y93H V103N G117A F160V G166A",6
"lib2","SARS-CoV-2","GTCTCTGAAGGTAACA",7,64.88,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N118V N151A L162F P169H",4
"lib2","SARS-CoV-2","GTCTCTGCACGTTTAT",1,35.47,6.78,-4.06,0.27,1.5,1.1,0.01,">1 nonsynonymous","T46I L162Y Q168L",3
"lib2","SARS-CoV-2","GTCTCTGGTGATAGTA",3,53.95,10.8,-0.04,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTCTGTAATTTCAA",5,0.52,NA,NA,NA,NA,NA,NA,"stop","N1W A14G S43R T55I N107V E141* G152D",7
"lib2","SARS-CoV-2","GTCTCTTAATCGGCTC",5,75.99,10.68,-0.15,0.05,2.89,1.11,0,">1 nonsynonymous","P54W C61T",2
"lib2","SARS-CoV-2","GTCTCTTAATGGACCG",2,14.73,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y50V L57P",2
"lib2","SARS-CoV-2","GTCTGAAATAATTAGG",17,95.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25K D98P S147M",3
"lib2","SARS-CoV-2","GTCTGAAATAGTGTGA",7,36.51,6,-4.84,0.67,3,1.11,0,">1 nonsynonymous","S69Q P82T P149V",3
"lib2","SARS-CoV-2","GTCTGAATAAACCGCA",17,256.07,10.79,-0.04,0.03,2.91,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCTGAATACTCCTGA",2,138.82,9.7,-1.14,0.02,2.94,1.09,0,">1 nonsynonymous","A33L L125P",2
"lib2","SARS-CoV-2","GTCTGACCACCGACCA",3,2.36,NA,NA,NA,NA,NA,NA,"stop","F12R R27Y L38I Y50M Y91L L122*",6
"lib2","SARS-CoV-2","GTCTGACGTGAGAATG",8,132.87,8.88,-1.96,0.07,2.8,1.08,0,">1 nonsynonymous","D98K G117L",2
"lib2","SARS-CoV-2","GTCTGCAAACTGCAAG",8,87.25,10.04,-0.8,0.1,2.28,1.04,0,"1 nonsynonymous","F17P",1
"lib2","SARS-CoV-2","GTCTGCAGGCCACCCA",2,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M A14R V103E G116K",4
"lib2","SARS-CoV-2","GTCTGCATACCGCCGA",3,14.55,10.62,-0.22,0.08,2.74,1.24,0.01,"1 nonsynonymous","A22T",1
"lib2","SARS-CoV-2","GTCTGCATTTAAAACA",3,30.16,6,-4.84,1.25,1.5,1.19,0.02,">1 nonsynonymous","G117C N118L R179V",3
"lib2","SARS-CoV-2","GTCTGCCAAAATATTA",3,21.71,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S41G Y50T D97P T170I",4
"lib2","SARS-CoV-2","GTCTGCGAAGACTGGC",7,70.85,10.01,-0.83,0.08,2.27,1.08,0,">1 nonsynonymous","N130Q R136L F160R V173F",4
"lib2","SARS-CoV-2","GTCTGCGAGTAGTGCC",1,13.93,10.57,-0.26,0.07,2.73,1.31,0,">1 nonsynonymous","F62W D97F",2
"lib2","SARS-CoV-2","GTCTGCTAGGTAGAAT",9,2.45,NA,NA,NA,NA,NA,NA,"stop","E10S D98L L122* F160M",4
"lib2","SARS-CoV-2","GTCTGCTCATATAGAA",2,15.61,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D98I L131K I138C",3
"lib2","SARS-CoV-2","GTCTGGATATGCTAAA",10,381.19,9.69,-1.15,0.06,2.04,1.07,0,">1 nonsynonymous","L5S D90C Y178T",3
"lib2","SARS-CoV-2","GTCTGGATCCTTTAAT",3,5.2,NA,NA,NA,NA,NA,NA,"stop","N24* L60A N107S Y119V C158H",5
"lib2","SARS-CoV-2","GTCTGGGCCTCTACAA",1,51.86,10.79,-0.05,0.03,3,1.01,0,">1 nonsynonymous","S43I G83M",2
"lib2","SARS-CoV-2","GTCTGGGCTGAAAAAT",36,267.1,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","C6N A105C P169E",3
"lib2","SARS-CoV-2","GTCTGGTAACAGGAAA",3,4.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y Y50S D90Y N107D A192T",5
"lib2","SARS-CoV-2","GTCTGGTAACCAGGTA",4,11.11,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F62C Y91P",2
"lib2","SARS-CoV-2","GTCTGGTCCCCGAAAT",4,26.88,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A105G S113Q Y119I",3
"lib2","SARS-CoV-2","GTCTGGTTCCAGTACT",4,74.01,6,-4.84,2,2.05,1.18,0,">1 nonsynonymous","L5S Y93I T100Y G172E",4
"lib2","SARS-CoV-2","GTCTGTGACTACTAGA",6,271.11,8.72,-2.12,0.05,2.97,1.07,0,">1 nonsynonymous","I2N N120R Y159V Y175W",4
"lib2","SARS-CoV-2","GTCTGTGCCACAATGT",1,12.09,10.69,-0.14,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTGTTCATAGTTGC",11,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T A105S E135W",3
"lib2","SARS-CoV-2","GTCTGTTTATATGGCG",13,67.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3K V37G C49V D59R G146P F167K",6
"lib2","SARS-CoV-2","GTCTGTTTCAAATCAA",3,8.16,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I28G C102S S139T",3
"lib2","SARS-CoV-2","GTCTGTTTGCGTCCAG",23,189.93,8.88,-1.96,0.08,2.63,1.12,0,">1 nonsynonymous","R16H T63Y Y143L G174K",4
"lib2","SARS-CoV-2","GTCTTAAAAATGTCAA",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53F L95R F185S",3
"lib2","SARS-CoV-2","GTCTTAAATAAACACC",2,38.62,10.82,-0.02,0.06,2.99,1.04,0,">1 nonsynonymous","N24S Y39E",2
"lib2","SARS-CoV-2","GTCTTAACAATATTTT",5,118.04,10.19,-0.64,0.03,2.93,1.04,0,">1 nonsynonymous","F126L G155A K199M",3
"lib2","SARS-CoV-2","GTCTTAAGCATAGGAT",3,25.11,8.69,-2.14,0.21,1.93,1.14,0.02,">1 nonsynonymous","I104L Y165L",2
"lib2","SARS-CoV-2","GTCTTAAGCTTAGCAT",5,30.45,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2L V77M A81L F99R Y119G",5
"lib2","SARS-CoV-2","GTCTTAAGTAGATACA",5,114.42,10.79,-0.04,0.05,2.88,1.09,0,">1 nonsynonymous","P169T P197L",2
"lib2","SARS-CoV-2","GTCTTAATACGACTCG",3,87.99,10.84,0,0.06,2.87,1.16,0,"1 nonsynonymous","V37Q",1
"lib2","SARS-CoV-2","GTCTTAATCTACCCTA",3,57.51,9.56,-1.28,0.08,2.79,1.13,0,"1 nonsynonymous","G117T",1
"lib2","SARS-CoV-2","GTCTTAATTCGCCTGA",3,31.99,10.68,-0.16,0.06,2.93,1.1,0,">1 nonsynonymous","Y91F D98A",2
"lib2","SARS-CoV-2","GTCTTACAGAATGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V77L K87V Y119L T140Q G146* Q163Y",6
"lib2","SARS-CoV-2","GTCTTACCAAGTTAGT",3,24.14,9.28,-1.56,0.2,1.67,1.13,0.02,">1 nonsynonymous","Y91R S139H",2
"lib2","SARS-CoV-2","GTCTTACCGAATGCCA",10,162.83,10.84,0,0.05,2.94,1.08,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","GTCTTACCGTCCTAAT",3,32.09,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F17S L60N S139A Q144L",4
"lib2","SARS-CoV-2","GTCTTACTAAAACTAT",2,5.03,8.27,-2.57,0.2,1.59,1,0.01,">1 nonsynonymous","Y123E S139C",2
"lib2","SARS-CoV-2","GTCTTACTAGCATCAC",2,17.24,8.38,-2.46,0.2,2.92,1,0.02,">1 nonsynonymous","I138N N157R",2
"lib2","SARS-CoV-2","GTCTTACTATCTCTGT",2,0.96,NA,NA,NA,NA,NA,NA,"stop","F12* D68Q N110W",3
"lib2","SARS-CoV-2","GTCTTAGAAAGAATAA",2,0.43,NA,NA,NA,NA,NA,NA,"stop","Y35* D97S E141T P197*",4
"lib2","SARS-CoV-2","GTCTTAGTATCAATCC",15,85.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A81P D97E Y119M",3
"lib2","SARS-CoV-2","GTCTTATAACCCGCTT",12,17.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I N107L E141R C158N",4
"lib2","SARS-CoV-2","GTCTTATGATAATTGT",8,176.26,10.05,-0.78,0.06,2.54,1.02,0,">1 nonsynonymous","N58T I80L",2
"lib2","SARS-CoV-2","GTCTTATGTCTAGTTG",1,12.55,9.15,-1.69,0.12,1.89,1,0.01,">1 nonsynonymous","V37I D137N",2
"lib2","SARS-CoV-2","GTCTTCATGGGGGTAA",7,6.21,NA,NA,NA,NA,NA,NA,"stop","F8T D68K A89Q S139T C158*",5
"lib2","SARS-CoV-2","GTCTTCCAACTTAACC",8,282.04,7.9,-2.94,0.11,2.52,1.07,0,">1 nonsynonymous","G146P V153S T201C",3
"lib2","SARS-CoV-2","GTCTTCCAGCGCCAAT",3,17.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38T K56W Q84R Y93Q Y178N",5
"lib2","SARS-CoV-2","GTCTTCGTCCGGTGTG",7,99.77,9.3,-1.54,0.12,2.28,1.13,0.01,">1 nonsynonymous","G51F T170S",2
"lib2","SARS-CoV-2","GTCTTCTATCTCAACA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","K26R G74N N151* Y178F",4
"lib2","SARS-CoV-2","GTCTTCTCCTTCTCCC",3,22.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L95C S129F S139L",3
"lib2","SARS-CoV-2","GTCTTCTCGAATAAAT",7,23.3,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","D90S I104D Y119V P149R",4
"lib2","SARS-CoV-2","GTCTTCTGTGAGAGTG",3,49.33,10.84,0.01,0.05,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","GTCTTCTTACACTTAT",4,114.32,10.58,-0.25,0.03,3,1.01,0,">1 nonsynonymous","F44Y P169T",2
"lib2","SARS-CoV-2","GTCTTCTTGGAAAATC",25,649.08,10.12,-0.71,0.02,2.95,1.04,0,">1 nonsynonymous","A89S G166A",2
"lib2","SARS-CoV-2","GTCTTGAACGTAAATC",1,50.57,10.8,-0.03,0.07,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GTCTTGAGAGGCCGCT",21,326.21,10.3,-0.54,0.03,2.81,1.03,0,">1 nonsynonymous","N4L D98Q",2
"lib2","SARS-CoV-2","GTCTTGATACAACGTT",2,1.88,NA,NA,NA,NA,NA,NA,"stop","D34K Y91H G152V Y178* S184K",5
"lib2","SARS-CoV-2","GTCTTGCAAGATGGTT",2,7.26,11.07,0.24,0.12,2.85,1.12,0.01,"1 nonsynonymous","Q84A",1
"lib2","SARS-CoV-2","GTCTTGCCAACGTGCT",4,33.4,10.24,-0.6,0.09,2.62,1.18,0,"1 nonsynonymous","Y66S",1
"lib2","SARS-CoV-2","GTCTTGCCTGGTTTCG",5,2.99,NA,NA,NA,NA,NA,NA,"stop","I28* V182W",2
"lib2","SARS-CoV-2","GTCTTGGCACACATAA",2,65.77,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G83I S129Y Q176S",3
"lib2","SARS-CoV-2","GTCTTGTGATACGCTT",6,7.54,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","A33V I88R L183C",3
"lib2","SARS-CoV-2","GTCTTTAAACACCTAA",1,70.52,10.3,-0.53,0.04,2.91,1.11,0,">1 nonsynonymous","V37L T148R F156L",3
"lib2","SARS-CoV-2","GTCTTTAAGAACTCAT",6,68.64,10.59,-0.25,0.05,2.96,1.04,0,">1 nonsynonymous","K132H E154N",2
"lib2","SARS-CoV-2","GTCTTTAATCTAATGC",1,37.64,10.71,-0.12,0.07,2.94,1.06,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","GTCTTTACATAATATG",1,7.41,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","L5V S41W D90H",3
"lib2","SARS-CoV-2","GTCTTTAGTGAACGTT",9,74.2,10.62,-0.21,0.04,2.91,1.06,0,">1 nonsynonymous","D97Q P149V",2
"lib2","SARS-CoV-2","GTCTTTCATCTGGTAC",2,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83I D98V V181W",3
"lib2","SARS-CoV-2","GTCTTTCGATCGATAT",7,55.94,10.58,-0.25,0.06,2.92,1.07,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","GTCTTTGAAATCTTTG",1,12.93,10,-0.84,0.17,2.76,1,0.01,"1 nonsynonymous","Y121W",1
"lib2","SARS-CoV-2","GTCTTTGAACGAAGTC",2,7.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","GTCTTTGAGTATTCAA",2,10.46,11.18,0.35,0.04,3,1,0,"1 nonsynonymous","Q163M",1
"lib2","SARS-CoV-2","GTCTTTGTGAAAATTG",10,105.69,10.13,-0.71,0.05,2.65,1,0,"1 nonsynonymous","E135W",1
"lib2","SARS-CoV-2","GTCTTTGTGCTTTGAA",4,105.91,10.8,-0.03,0.06,2.94,1.03,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","GTCTTTTAATCCTATT",5,32.46,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G86N V180G",2
"lib2","SARS-CoV-2","GTCTTTTCCTGATGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V103* R136A",2
"lib2","SARS-CoV-2","GTCTTTTCCTTAAAGA",12,5.02,NA,NA,NA,NA,NA,NA,"stop","A22T T46* T85R N107F Y121S Q176L",6
"lib2","SARS-CoV-2","GTCTTTTGAAATTGAT",7,2.27,NA,NA,NA,NA,NA,NA,"stop","L5Y D75Q D90I D98C N120M G196*",6
"lib2","SARS-CoV-2","GTGAAAAAACATTGTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","GTGAAAAAGTTGATTT",3,61.35,9.64,-1.2,0.06,2.62,1.04,0,">1 nonsynonymous","Y50W D59R D98T G116Q S184N",5
"lib2","SARS-CoV-2","GTGAAAAATATGTATC",7,87.29,10.73,-0.11,0.02,3,1.01,0,"1 nonsynonymous","A33C",1
"lib2","SARS-CoV-2","GTGAAAACAGCCTATT",12,195.94,9.72,-1.12,0.03,2.82,1.07,0,">1 nonsynonymous","A42I Y143M",2
"lib2","SARS-CoV-2","GTGAAAACCCATCTTA",3,29.17,9.96,-0.88,0.12,2.42,1.12,0.01,">1 nonsynonymous","G83R Y123T",2
"lib2","SARS-CoV-2","GTGAAAACCTATCGCG",2,19.35,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","F12Y D68L N107H G155R",4
"lib2","SARS-CoV-2","GTGAAAAGAGAAAGGC",2,16.6,10.88,0.04,0.07,3,1.03,0,">1 nonsynonymous","I2M E154S",2
"lib2","SARS-CoV-2","GTGAAAAGCCGTTCGT",5,52.23,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","C61W A105C G117L E141N",4
"lib2","SARS-CoV-2","GTGAAAATGAGTGCAG",4,14.03,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2H G83W P96T D98T",4
"lib2","SARS-CoV-2","GTGAAAATGCCAGCAA",2,33.82,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","F99I W106R Y178K T201E",4
"lib2","SARS-CoV-2","GTGAAAATTATTCGAT",3,133.42,10.65,-0.19,0.04,2.95,1.06,0,"1 nonsynonymous","A67V",1
"lib2","SARS-CoV-2","GTGAAACAAGAGAACT",3,0,NA,NA,NA,NA,NA,NA,"stop","W106G N151T F167* K199S",4
"lib2","SARS-CoV-2","GTGAAACACAGTCACT",11,96.42,6,-4.84,0.75,1.5,1.15,0.01,">1 nonsynonymous","A67D S139F A192F T201L",4
"lib2","SARS-CoV-2","GTGAAACATCGTATTG",2,0.33,NA,NA,NA,NA,NA,NA,"stop","A42G P82* Y119G",3
"lib2","SARS-CoV-2","GTGAAACCCCTATTAA",7,56.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D34W K114A C158T L188V",4
"lib2","SARS-CoV-2","GTGAAACCTTAACAGT",4,43.14,9.33,-1.5,0.18,1.72,1.18,0.02,">1 nonsynonymous","E10F D98I",2
"lib2","SARS-CoV-2","GTGAAACGTCTAAATA",5,9.79,6.65,-4.18,0.39,1.5,1.08,0.03,">1 nonsynonymous","G9V N64H R78S S113N Y123M E141K",6
"lib2","SARS-CoV-2","GTGAAACGTGTTTTTA",2,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S C31N A67T T85R S129M T148L",6
"lib2","SARS-CoV-2","GTGAAACTCCATCGTA",11,97.88,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P161T G172N",2
"lib2","SARS-CoV-2","GTGAAAGAATATCTAA",7,2.73,NA,NA,NA,NA,NA,NA,"stop","N92W G146* Q168M",3
"lib2","SARS-CoV-2","GTGAAAGAATTTGACT",2,1.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib2","SARS-CoV-2","GTGAAAGAGTCACACG",5,76.25,10.81,-0.03,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAAAGAGTTCCGAA",5,52.95,7.21,-3.62,0.12,1.87,1.13,0,">1 nonsynonymous","Y159V P169H E186D",3
"lib2","SARS-CoV-2","GTGAAAGATTAGACGG",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D N40F D90V Q168I",4
"lib2","SARS-CoV-2","GTGAAAGCCGACTATG",1,32.09,9.91,-0.93,0.07,2.04,1.01,0,">1 nonsynonymous","P96L K198N",2
"lib2","SARS-CoV-2","GTGAAAGGGCTCACAT",3,61.62,10.57,-0.27,0.04,2.93,1.05,0,">1 nonsynonymous","I2M E141I",2
"lib2","SARS-CoV-2","GTGAAAGGGGTCCTTT",5,22.38,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1S G116L R124K E141N",4
"lib2","SARS-CoV-2","GTGAAAGTCACGTCGC",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R S45I Y119K N157F",4
"lib2","SARS-CoV-2","GTGAAAGTGCAGCCCA",3,1.08,NA,NA,NA,NA,NA,NA,"stop","D90L P96A E141S F167L G172A T201*",6
"lib2","SARS-CoV-2","GTGAAATAAAACATGG",9,148.65,9.73,-1.1,0.02,2.88,1.09,0,">1 nonsynonymous","N109D K199C",2
"lib2","SARS-CoV-2","GTGAAATACATCCTCG",2,13.93,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V11R S45P F62L F99L",4
"lib2","SARS-CoV-2","GTGAAATATAAGCTAA",9,55.63,6,-4.84,2,1.5,1.29,0.01,">1 nonsynonymous","T63P D97M S139W S200K",4
"lib2","SARS-CoV-2","GTGAAATATCATGAAA",1,18.29,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","C6F A22P F70R N130D T140V",5
"lib2","SARS-CoV-2","GTGAAATCAAACCTAT",2,0.11,NA,NA,NA,NA,NA,NA,"stop","S41C C61R F99* Y143P",4
"lib2","SARS-CoV-2","GTGAAATCATTAACAC",4,23.52,10.69,-0.15,0.04,2.97,1.05,0,"1 nonsynonymous","G9V",1
"lib2","SARS-CoV-2","GTGAAATGAAAAAGAA",4,59.81,10.03,-0.81,0.04,2.88,1.08,0,">1 nonsynonymous","Y123N K199V",2
"lib2","SARS-CoV-2","GTGAAATGGAACATTT",3,46.53,9.43,-1.41,0.12,1.64,1.06,0.01,">1 nonsynonymous","S36L G86S L188M T201M",4
"lib2","SARS-CoV-2","GTGAAATGTTGACGAT",6,71.56,9.98,-0.85,0.06,2.94,1.02,0,">1 nonsynonymous","E10K E154V A192G",3
"lib2","SARS-CoV-2","GTGAAATTAAAAAAAA",7,79.58,10.85,0.01,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAAATTATGCACAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","T15Q K56*",2
"lib2","SARS-CoV-2","GTGAAATTCCTGAAGT",1,46.03,10.85,0.01,0.06,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAAATTCTCGGGTA",7,88.46,10.8,-0.04,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAACAAAAACTTTG",1,37.55,9.81,-1.03,0.07,2.85,1.06,0,">1 nonsynonymous","N1T T170H",2
"lib2","SARS-CoV-2","GTGAACAAAAGGACCA",4,31.44,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N58I V181S",2
"lib2","SARS-CoV-2","GTGAACAAACATAGTT",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E N109L G146V G174L",4
"lib2","SARS-CoV-2","GTGAACAATCACGTTA",15,165.33,10.34,-0.5,0.03,2.92,1,0,">1 nonsynonymous","R27C D97C R136K P197S",4
"lib2","SARS-CoV-2","GTGAACACGCCCTAAA",3,16.76,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S41E R73Q G83R V103L",4
"lib2","SARS-CoV-2","GTGAACACTTCCGCAG",12,232.49,10.88,0.05,0.05,2.91,1.11,0,">1 nonsynonymous","V37T S200H",2
"lib2","SARS-CoV-2","GTGAACAGGAGACATG",9,93.12,9.36,-1.48,0.05,2.84,1.16,0,">1 nonsynonymous","S36F Y119N E154R T201M",4
"lib2","SARS-CoV-2","GTGAACCAATGCGTAA",1,7.36,10.3,-0.54,0.36,1.95,1.04,0.02,">1 nonsynonymous","A18R T100E S164N",3
"lib2","SARS-CoV-2","GTGAACCAATTGTCAT",5,81.8,10.91,0.07,0.1,2.85,1.17,0,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","GTGAACCGCAGTATTT",1,12.53,9.98,-0.86,0.17,1.78,1.03,0.01,">1 nonsynonymous","D59G A81F",2
"lib2","SARS-CoV-2","GTGAACCTACCAATCA",14,246.26,10.83,-0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAACCTAGAAAAAG",15,152.38,10.57,-0.27,0.03,2.87,1.08,0,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","GTGAACCTAGGTTACT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","S43I F156*",2
"lib2","SARS-CoV-2","GTGAACCTCGTACCAG",1,51.8,9.82,-1.02,0.03,2.94,1.07,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","GTGAACGACAGATGGG",3,56.58,10.61,-0.23,0.04,2.94,1.06,0,">1 nonsynonymous","T55I I104M L111I K132R",4
"lib2","SARS-CoV-2","GTGAACGACTATACAA",2,13.83,6,-4.84,2,3,1.33,0.02,">1 nonsynonymous","S41L Y93Q N120C I142Q Y165L",5
"lib2","SARS-CoV-2","GTGAACGTAATAATTC",2,15.37,10.55,-0.29,0.07,3,1.02,0,">1 nonsynonymous","T100V S139C",2
"lib2","SARS-CoV-2","GTGAACGTATAAAATA",5,92.84,10.64,-0.19,0.04,2.98,1.03,0,">1 nonsynonymous","A67C I142V",2
"lib2","SARS-CoV-2","GTGAACGTGTCGAGGC",5,43.4,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8Y G51I V71I C102R G166A",5
"lib2","SARS-CoV-2","GTGAACTACAGACACA",10,57.62,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40H V103R V153L",3
"lib2","SARS-CoV-2","GTGAACTAGTTCCATG",5,31.72,9.88,-0.96,0.09,2.27,1,0,">1 nonsynonymous","D98V R136L",2
"lib2","SARS-CoV-2","GTGAACTCATCTCGCA",2,31.73,10.25,-0.58,0.05,2.84,1.14,0,">1 nonsynonymous","I2S C31T T55R",3
"lib2","SARS-CoV-2","GTGAACTCCCCATGAA",7,14.01,NA,NA,NA,NA,NA,NA,"stop","V52H T63*",2
"lib2","SARS-CoV-2","GTGAACTCTATTAAAT",2,23.06,10.69,-0.15,0.05,2.92,1.1,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GTGAACTTGCTCACCT",7,3.28,NA,NA,NA,NA,NA,NA,"stop","L57K F99S N107F N118*",4
"lib2","SARS-CoV-2","GTGAAGAAATCACCCA",8,169.16,10.83,0,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAAGACGCCTTAAT",2,15.49,10.07,-0.76,0.08,2.81,1.01,0,">1 nonsynonymous","N40Y T46I T148I N171H",4
"lib2","SARS-CoV-2","GTGAAGAGATAAAATG",9,183.7,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Y123W C158I Q176T",3
"lib2","SARS-CoV-2","GTGAAGAGGAAAAGAA",3,34.76,6.71,-4.13,0.3,1.5,1.14,0.01,">1 nonsynonymous","W23K G196F",2
"lib2","SARS-CoV-2","GTGAAGAGTTGAAACC",10,130.68,10.08,-0.75,0.02,2.88,1.04,0,">1 nonsynonymous","V37F G86D L188Q",3
"lib2","SARS-CoV-2","GTGAAGATATCAGACG",15,66.82,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P82S A89L T100V",3
"lib2","SARS-CoV-2","GTGAAGATTTCGCTTT",9,192.87,10.8,-0.04,0.03,2.93,1.08,0,">1 nonsynonymous","R16K G83N T201G",3
"lib2","SARS-CoV-2","GTGAAGCGAAAACAAT",10,23.66,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","T15S W23M G51P R127D",4
"lib2","SARS-CoV-2","GTGAAGCGAGTCAAAC",2,21.75,10.27,-0.56,0.05,2.96,1.04,0,">1 nonsynonymous","K26E L60C",2
"lib2","SARS-CoV-2","GTGAAGCTCAATTTCA",11,158.26,10.86,0.02,0.04,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGAAGCTGGTCTCGT",2,21.94,9.86,-0.97,0.16,2.22,1.05,0.01,">1 nonsynonymous","A105C K132D",2
"lib2","SARS-CoV-2","GTGAAGGATATAGTTA",6,43.78,6.16,-4.68,0.41,1.5,1.09,0,">1 nonsynonymous","A67N V103Q N120I",3
"lib2","SARS-CoV-2","GTGAAGGGAAATGAGC",9,20.74,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14L K87Q P96C N151P",4
"lib2","SARS-CoV-2","GTGAAGTCGATGGCGG",6,13900.04,8.97,-1.87,0.04,2.85,1.03,0,">1 nonsynonymous","S113T N120L",2
"lib2","SARS-CoV-2","GTGAAGTGTCGAACCT",4,10.44,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","T3W S113W L125P C158N V173I T201R",6
"lib2","SARS-CoV-2","GTGAAGTTTAGAAAGC",1,0.46,NA,NA,NA,NA,NA,NA,"stop","G51L G117*",2
"lib2","SARS-CoV-2","GTGAATACCAGTAAGC",10,44.33,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","K56L F70T D97N S129F",4
"lib2","SARS-CoV-2","GTGAATACCGAGTCTT",2,8.44,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","T55Y I104K S108H",3
"lib2","SARS-CoV-2","GTGAATAGAAAATCAG",6,182.32,10.71,-0.13,0.05,2.91,1.09,0,"1 nonsynonymous","V115M",1
"lib2","SARS-CoV-2","GTGAATAGCACCATAT",1,10.28,6.78,-4.05,0.97,1.5,1.05,0.02,">1 nonsynonymous","R27E Y91A P169C",3
"lib2","SARS-CoV-2","GTGAATAGCGCCTACA",4,34.49,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88K P96Q",2
"lib2","SARS-CoV-2","GTGAATATACCTCGGG",2,31.09,10.43,-0.41,0.03,2.91,1.09,0,">1 nonsynonymous","G83Q N130L P149H",3
"lib2","SARS-CoV-2","GTGAATATAGATAAAT",1,15.59,9.85,-0.99,0.05,2.96,1.04,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","GTGAATATAGTGGATA",1,7.69,NA,NA,NA,NA,NA,NA,"stop","Y35V F47*",2
"lib2","SARS-CoV-2","GTGAATATCACTAGAG",1,4.53,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTGAATCACATGAGTA",9,148.53,10.66,-0.17,0.04,2.93,1.07,0,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","GTGAATCATCAAGTAT",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L P54A C61T",3
"lib2","SARS-CoV-2","GTGAATCCGGAGCAAA",9,193.88,10.28,-0.56,0.05,2.66,1.04,0,">1 nonsynonymous","L111Y K132W S164K",3
"lib2","SARS-CoV-2","GTGAATCGCTTTTATT",6,30.25,6.02,-4.82,1.21,1.5,1.17,0.02,">1 nonsynonymous","R25L F47L Y119G E186S",4
"lib2","SARS-CoV-2","GTGAATCGTGCAGCTT",1,12.21,7.42,-3.42,0.32,1.5,1,0.03,">1 nonsynonymous","A14T P161V",2
"lib2","SARS-CoV-2","GTGAATGACGCTGGAA",6,47.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4M S19Y V77W Y165S",4
"lib2","SARS-CoV-2","GTGAATGATCCTCCAT",6,9.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L60P V103L R127I K132F",4
"lib2","SARS-CoV-2","GTGAATGCCCTCGTGA",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68L I88V Y121L L131N Y178H",5
"lib2","SARS-CoV-2","GTGAATGGAGCATAGG",2,30.52,10.11,-0.73,0.2,1.5,1.01,0.02,">1 nonsynonymous","N4L F17I T85S",3
"lib2","SARS-CoV-2","GTGAATGGTCAGTTTA",1,13.73,8.19,-2.65,0.19,1.96,1.14,0.01,">1 nonsynonymous","Y91C G117E",2
"lib2","SARS-CoV-2","GTGAATTAAACGAAAT",5,118.8,9.65,-1.18,0.03,2.97,1.04,0,">1 nonsynonymous","T55F T170F",2
"lib2","SARS-CoV-2","GTGAATTAAATGTTAA",2,27.22,10.86,0.03,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGAATTAACAACACG",4,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124N I142N",2
"lib2","SARS-CoV-2","GTGAATTAAGACCTCC",1,121.37,9.25,-1.59,0.13,1.72,1.12,0.01,">1 nonsynonymous","N40P D137S",2
"lib2","SARS-CoV-2","GTGAATTAAGCGACCG",2,24.53,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G83V A89N Y178R",3
"lib2","SARS-CoV-2","GTGAATTACACAGTCA",1,16.53,9.83,-1,0.09,2.97,1,0,">1 nonsynonymous","C61G P169V",2
"lib2","SARS-CoV-2","GTGAATTATAGTGTTC",13,91.34,9.95,-0.88,0.08,2.69,1.06,0,">1 nonsynonymous","T15S A42T Y121M S147I",4
"lib2","SARS-CoV-2","GTGAATTATGGTGAAA",3,0.38,NA,NA,NA,NA,NA,NA,"stop","F44V F70* P149I",3
"lib2","SARS-CoV-2","GTGAATTTAAGAAGAA",4,18.54,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","W106M P133D Q176L K199Y",4
"lib2","SARS-CoV-2","GTGACAAACTTGCAAA",9,76.93,8.46,-2.38,0.15,1.83,1.1,0.01,">1 nonsynonymous","S45T G83F Y123T G155N A192H P197R",6
"lib2","SARS-CoV-2","GTGACAAACTTTCCAG",6,44.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30V S113I L131V R136I",4
"lib2","SARS-CoV-2","GTGACAAATAAATAAT",9,186.22,10.09,-0.74,0.08,2.4,1.03,0,">1 nonsynonymous","T15I Y35S",2
"lib2","SARS-CoV-2","GTGACAACAGGAGTTA",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110W Q168T",2
"lib2","SARS-CoV-2","GTGACAACCAACAGAC",2,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R P149F",2
"lib2","SARS-CoV-2","GTGACAATAAAAAACA",3,55.32,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","Y21K V65P T201D",3
"lib2","SARS-CoV-2","GTGACAATAAACCAGG",3,15.06,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","W106I Y121V N130T C150F",4
"lib2","SARS-CoV-2","GTGACACAAGACCCTG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10W V32K K87M I142Y F156V V181P",6
"lib2","SARS-CoV-2","GTGACACAATATTAAT",4,80.83,7.56,-3.28,0.15,1.52,1.09,0.01,"1 nonsynonymous","C150G",1
"lib2","SARS-CoV-2","GTGACACAGTAATCAA",1,60.24,10.74,-0.1,0.04,2.99,1.03,0,">1 nonsynonymous","G9N S53N D98G F160S",4
"lib2","SARS-CoV-2","GTGACACCTTCTCAAA",2,11.83,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","A42W V103W N151V G174T",4
"lib2","SARS-CoV-2","GTGACACGCAGTACAG",8,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S C61N I104L K199Q",4
"lib2","SARS-CoV-2","GTGACACGTACTTCCA",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A D34Y F44L C61R G152I",5
"lib2","SARS-CoV-2","GTGACAGAACGAAACG",12,403.08,8.72,-2.11,0.06,1.94,1.09,0,">1 nonsynonymous","P133I Y143M",2
"lib2","SARS-CoV-2","GTGACAGACAATTAAT",2,19.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5M V37G Y50T N107V N120K P149L",6
"lib2","SARS-CoV-2","GTGACAGCGTAAAATT",1,16.25,7.03,-3.81,0.28,1.67,1.14,0.02,">1 nonsynonymous","E10S S113F Y119T",3
"lib2","SARS-CoV-2","GTGACAGGCTCGACTC",3,54.13,10.78,-0.05,0.07,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGACAGTCTAATATA",2,11.25,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T63K C102R",2
"lib2","SARS-CoV-2","GTGACATAATAGATAA",3,7.8,9.54,-1.3,0.07,3,1.02,0,">1 nonsynonymous","N64L L122D G174E",3
"lib2","SARS-CoV-2","GTGACATACGGATTTA",1,46.27,10.94,0.1,0.08,2.93,1.07,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","GTGACATATGCAAATT",1,42.58,10.36,-0.48,0.11,2.36,1,0,">1 nonsynonymous","R27T D97T Y178L",3
"lib2","SARS-CoV-2","GTGACATCAACCTGGG",7,61.17,10.8,-0.04,0.05,3,1.03,0,"1 nonsynonymous","V115L",1
"lib2","SARS-CoV-2","GTGACATCATGCAAGG",4,62.94,9.46,-1.38,0.09,1.84,1.05,0,">1 nonsynonymous","I2W I28E",2
"lib2","SARS-CoV-2","GTGACATCCGGGTAAC",2,0.26,NA,NA,NA,NA,NA,NA,"stop","P7* I72Y T85S",3
"lib2","SARS-CoV-2","GTGACATTAACAATAA",3,52.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K26R S69E N120I R127F",4
"lib2","SARS-CoV-2","GTGACATTGAGACCAT",4,47.97,8.39,-2.44,0.13,1.74,1.07,0.01,"1 nonsynonymous","R179T",1
"lib2","SARS-CoV-2","GTGACCAAAAGACTGC",14,198.87,10.8,-0.04,0.06,2.89,1.09,0,">1 nonsynonymous","P7S L122H",2
"lib2","SARS-CoV-2","GTGACCAACGACCAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S S36M D97S",3
"lib2","SARS-CoV-2","GTGACCACCAACCATT",5,88.15,10.17,-0.67,0.05,2.81,1.06,0,">1 nonsynonymous","E10D T63D V115A F185L",4
"lib2","SARS-CoV-2","GTGACCACGGATAACC",1,5.3,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","S36L G86V",2
"lib2","SARS-CoV-2","GTGACCACTAAATCTG",1,3.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181A",1
"lib2","SARS-CoV-2","GTGACCAGCTAAAAAC",5,40.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C61T P82M P149S E154F",4
"lib2","SARS-CoV-2","GTGACCATAGGAACGT",11,0.4,NA,NA,NA,NA,NA,NA,"stop","I2A V20P L38A D68E R136* Y143F T201*",7
"lib2","SARS-CoV-2","GTGACCATGAACAACC",2,36.65,10.54,-0.3,0.05,2.95,1.07,0,">1 nonsynonymous","V32Q S53A D97Q",3
"lib2","SARS-CoV-2","GTGACCCACTTTTTAT",1,38.41,10.83,-0.01,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGACCCCATTTTATT",4,59.89,8.47,-2.36,0.18,2.78,1.07,0.01,">1 nonsynonymous","A42K S113Q Y119T S129K",4
"lib2","SARS-CoV-2","GTGACCCCTACATCAT",4,60.81,10.4,-0.43,0.06,2.98,1.03,0,"1 nonsynonymous","F156H",1
"lib2","SARS-CoV-2","GTGACCCGTAGAGACA",12,63.82,6,-4.84,1.4,1.5,1.15,0.02,">1 nonsynonymous","C61E F70R D90S Q163L T201M",5
"lib2","SARS-CoV-2","GTGACCCTCCTAGCAC",1,10.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K94F F126A P149I Y175K",4
"lib2","SARS-CoV-2","GTGACCCTTATTAATA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","N4L I28* V37D G86D K114S K128L Q144G P149H F167C",9
"lib2","SARS-CoV-2","GTGACCGAACTATACA",2,54.38,10.51,-0.33,0.07,2.85,1.04,0,"1 nonsynonymous","P7V",1
"lib2","SARS-CoV-2","GTGACCGCAAACATAT",4,4.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A33S V103C",3
"lib2","SARS-CoV-2","GTGACCGCGACCTAGC",1,23.75,10.08,-0.75,0.07,2.78,1.12,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","GTGACCGGATATCAAA",2,23.66,6.09,-4.74,1.21,1.5,1.1,0.03,">1 nonsynonymous","L38F L122T G172W",3
"lib2","SARS-CoV-2","GTGACCGTAACGAGGA",1,44.14,10.79,-0.05,0.05,2.93,1.09,0,">1 nonsynonymous","D97R T201H",2
"lib2","SARS-CoV-2","GTGACCGTAATGTCAA",1,9.52,9.69,-1.14,0.29,1.8,1.27,0.04,">1 nonsynonymous","T85Y Y178L H189I",3
"lib2","SARS-CoV-2","GTGACCTAGTTGCCCC",5,18.01,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N40D D59L I104W I142P V180N",5
"lib2","SARS-CoV-2","GTGACCTATGGGTTAG",2,6.5,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","G86K Y175I",2
"lib2","SARS-CoV-2","GTGACCTTTGCAAAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y93T A145M F160*",3
"lib2","SARS-CoV-2","GTGACCTTTTGTTAAT",4,17.85,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","A14G C31L V65M I88K P191V",5
"lib2","SARS-CoV-2","GTGACGAAAAAGTTAT",3,13.43,NA,NA,NA,NA,NA,NA,"stop","N1* A14V G117D",3
"lib2","SARS-CoV-2","GTGACGAAATTGCCTA",4,12.81,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","P161Y V173W T201V",3
"lib2","SARS-CoV-2","GTGACGACGCAAAATT",1,12.23,10.35,-0.48,0.1,2.96,1.09,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","GTGACGAGAGGAAAAA",11,173.79,9.93,-0.9,0.07,2.19,1.04,0,">1 nonsynonymous","W106S K114S K198L",3
"lib2","SARS-CoV-2","GTGACGATAACAGCAA",14,117.89,6.02,-4.82,0.75,1.96,1.2,0.01,">1 nonsynonymous","S29K A89Y S113M G196V",4
"lib2","SARS-CoV-2","GTGACGATCAAATGGT",7,42.42,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","C61I I88N K114A F160R K198R",5
"lib2","SARS-CoV-2","GTGACGATCATTTCGT",2,5.79,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","N1E V20Q S69L A81M K132S N151I",6
"lib2","SARS-CoV-2","GTGACGCAGAGTCCTC",2,64.85,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S29K S45D P149H P177M",4
"lib2","SARS-CoV-2","GTGACGCCGATGATTA",7,100.29,9.7,-1.13,0.08,1.99,1.09,0,">1 nonsynonymous","F17Y P133W K198S",3
"lib2","SARS-CoV-2","GTGACGGAGACAATAG",2,2.05,NA,NA,NA,NA,NA,NA,"stop","I2A P82*",2
"lib2","SARS-CoV-2","GTGACGGCGAAATCGA",3,28.65,10.21,-0.62,0.08,2.92,1.03,0,"1 nonsynonymous","E10F",1
"lib2","SARS-CoV-2","GTGACGGCGTAGTAGA",11,122.36,10.42,-0.42,0.04,2.87,1.06,0,">1 nonsynonymous","R27E T55V D98S",3
"lib2","SARS-CoV-2","GTGACGGGGATGGAAA",12,0.05,NA,NA,NA,NA,NA,NA,"stop","T85R R127* G155L G174T",4
"lib2","SARS-CoV-2","GTGACGTAAAGCGGAA",2,53.99,8.6,-2.23,0.1,2.96,1.15,0,"1 nonsynonymous","G166F",1
"lib2","SARS-CoV-2","GTGACGTGTCCAAGAG",2,10.74,7.01,-3.83,0.22,2.91,1.1,0,">1 nonsynonymous","S19E K48S A67F D68Y E76N P96L L131W N151H",8
"lib2","SARS-CoV-2","GTGACGTTATTCCTAC",4,35.74,6.36,-4.47,0.89,1.5,1.21,0.04,">1 nonsynonymous","R16T P96N E135L",3
"lib2","SARS-CoV-2","GTGACGTTGAGCTTAA",6,44.06,6.85,-3.99,0.18,1.89,1.15,0.01,">1 nonsynonymous","K132Q N157I",2
"lib2","SARS-CoV-2","GTGACTAAACCATAGA",4,52.38,10.84,0.01,0.05,3,1.02,0,">1 nonsynonymous","L5V N40H",2
"lib2","SARS-CoV-2","GTGACTAACACGAATA",1,42.72,8.25,-2.58,0.11,2.35,1,0,">1 nonsynonymous","G146L S200K",2
"lib2","SARS-CoV-2","GTGACTAACTACCTAC",4,0,NA,NA,NA,NA,NA,NA,"stop","A33* C61P P149L",3
"lib2","SARS-CoV-2","GTGACTAAGCTTGTGT",7,60.29,6.26,-4.58,0.59,1.5,1.18,0.02,">1 nonsynonymous","P82F W106F V115L",3
"lib2","SARS-CoV-2","GTGACTAAGTTTATAG",4,64.6,6,-4.84,2,3,1.16,0,"1 nonsynonymous","R179D",1
"lib2","SARS-CoV-2","GTGACTAATAGCACCA",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59T A81F Y91N S164V",4
"lib2","SARS-CoV-2","GTGACTACGGTAACGG",1,3.85,NA,NA,NA,NA,NA,NA,"stop","D59* G86S Y159E",3
"lib2","SARS-CoV-2","GTGACTAGACAGCATT",2,45.53,9.87,-0.97,0.06,2.35,1.06,0,">1 nonsynonymous","S19K Y35L N64Y T100K",4
"lib2","SARS-CoV-2","GTGACTAGCTATATAC",3,7.54,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L38I A67Y G117V A145V",4
"lib2","SARS-CoV-2","GTGACTATAGAATTGT",1,2.19,NA,NA,NA,NA,NA,NA,"stop","F12* S113M E135D E141R",4
"lib2","SARS-CoV-2","GTGACTATAGATTAAA",4,43.14,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","E10L A33R A67G S139V",4
"lib2","SARS-CoV-2","GTGACTCACAATTACT",4,23.21,9.47,-1.37,0.15,1.86,1.02,0.01,">1 nonsynonymous","T3S A14L S69L",3
"lib2","SARS-CoV-2","GTGACTCACCCGACCG",1,21.79,9.22,-1.62,0.17,1.82,1.1,0.03,">1 nonsynonymous","C6V F44A S129I",3
"lib2","SARS-CoV-2","GTGACTCAGAGCTTTC",3,45.75,8.38,-2.45,0.41,1.5,1,0.08,">1 nonsynonymous","T3D D59W W106S N120K",4
"lib2","SARS-CoV-2","GTGACTCATGAGGGTA",13,229.97,8.36,-2.48,0.09,1.93,1.08,0,">1 nonsynonymous","N4S S41H G117L T170F",4
"lib2","SARS-CoV-2","GTGACTCGACGTCTGC",5,0.57,NA,NA,NA,NA,NA,NA,"stop","N64G R73* G152A",3
"lib2","SARS-CoV-2","GTGACTCTCTCACTGT",14,45.23,6,-4.84,1.39,3,1.14,0.01,">1 nonsynonymous","P7D G86R F99T",3
"lib2","SARS-CoV-2","GTGACTGTAGCCGGGC",13,96.02,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","C49R A105S P161Y",3
"lib2","SARS-CoV-2","GTGACTTGTCGTGGCT",10,0.78,NA,NA,NA,NA,NA,NA,"stop","G9* Y39* F99G N107Y N120M Q176G",6
"lib2","SARS-CoV-2","GTGAGAACGCACAAAC",11,1.28,NA,NA,NA,NA,NA,NA,"stop","T3S S45* F99S S139E",4
"lib2","SARS-CoV-2","GTGAGAACGGTGTAGA",12,69.24,6,-4.84,1.95,3,1.14,0,">1 nonsynonymous","F44Y V71R",2
"lib2","SARS-CoV-2","GTGAGAACTGATGAAC",1,6.22,10.73,-0.11,0.01,3,1,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","GTGAGAACTTATGCAA",2,60.23,10.32,-0.51,0.06,2.94,1.08,0,"1 nonsynonymous","C31P",1
"lib2","SARS-CoV-2","GTGAGAAGCAACAGAT",2,68.72,10.33,-0.51,0.03,2.91,1.03,0,">1 nonsynonymous","A14C S113A",2
"lib2","SARS-CoV-2","GTGAGACAAAGGTACT",3,0.08,NA,NA,NA,NA,NA,NA,"stop","N30W G86V C102S P133*",4
"lib2","SARS-CoV-2","GTGAGACAGATTACAG",5,22.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91R D98V V103R",3
"lib2","SARS-CoV-2","GTGAGACATAATGGTT",1,64.97,10.14,-0.7,0.03,2.78,1.03,0,">1 nonsynonymous","N30M K48V",2
"lib2","SARS-CoV-2","GTGAGACCCATAAAAC",8,183.36,10.51,-0.32,0.05,2.9,1.06,0,">1 nonsynonymous","G9H Y66A",2
"lib2","SARS-CoV-2","GTGAGACGCAATCATT",14,4.64,NA,NA,NA,NA,NA,NA,"stop","V37E Y121W S129L N157* Q163T",5
"lib2","SARS-CoV-2","GTGAGACTATAAGAAG",7,86.57,9.52,-1.31,0.11,1.78,1.15,0,">1 nonsynonymous","F12R S43G",2
"lib2","SARS-CoV-2","GTGAGACTTCAAAAGG",6,50.57,8.77,-2.06,0.12,1.96,1.08,0.01,">1 nonsynonymous","G9S G83E P96G T100I Y119K K198I",6
"lib2","SARS-CoV-2","GTGAGAGACAATCGCT",3,64.75,10.28,-0.56,0.08,2.98,1.02,0,">1 nonsynonymous","A33K S43L Y143F",3
"lib2","SARS-CoV-2","GTGAGAGCACAAAACG",8,149.09,9.41,-1.42,0.04,1.91,1.08,0,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","GTGAGATCCCAGATAA",7,41.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L60S A89R V103W",3
"lib2","SARS-CoV-2","GTGAGATGCTCCCCGG",2,19.51,10.64,-0.19,0.17,2.72,1.05,0.02,"1 nonsynonymous","Y21F",1
"lib2","SARS-CoV-2","GTGAGATGGTATTTTT",8,0.71,NA,NA,NA,NA,NA,NA,"stop","S53* S164L",2
"lib2","SARS-CoV-2","GTGAGATGTAACTCGA",1,28.02,10.97,0.14,0.33,1.99,1.07,0.03,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","GTGAGCAATCCCCTCT",6,110.83,10.45,-0.38,0.04,2.93,1.04,0,">1 nonsynonymous","L5I S19P I104Y A190H",4
"lib2","SARS-CoV-2","GTGAGCAGATTGGTGA",14,252.27,7.66,-3.18,0.09,1.77,1.13,0,">1 nonsynonymous","L5R V37S F99Y Y175A",4
"lib2","SARS-CoV-2","GTGAGCAGGTATGTTC",5,20.5,6.1,-4.74,0.73,1.5,1.11,0.02,">1 nonsynonymous","F44C V52S Q144K",3
"lib2","SARS-CoV-2","GTGAGCATTATCATGC",13,33.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y66L A81C I104R N157S",4
"lib2","SARS-CoV-2","GTGAGCCAGCTAGCGG",15,12.97,NA,NA,NA,NA,NA,NA,"stop","C6K K114* T140N",3
"lib2","SARS-CoV-2","GTGAGCCGATTTATAC",1,22.82,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T85R I88Y Q144P Q163K",4
"lib2","SARS-CoV-2","GTGAGCCTAGGCAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","GTGAGCGAGCAAATAA",2,6.62,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","C6N S43D P82A D90Y W106E P133S",6
"lib2","SARS-CoV-2","GTGAGCGCTCCTGAAA",2,26.88,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","K56C N107L F134K",3
"lib2","SARS-CoV-2","GTGAGCGTAACTAAGT",2,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L G155R",2
"lib2","SARS-CoV-2","GTGAGCTAAGTGTGAG",8,26.23,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F17K F44M T63P T100N",4
"lib2","SARS-CoV-2","GTGAGCTCACTATACT",3,41.57,8.36,-2.48,0.1,2.43,1.07,0,">1 nonsynonymous","N107A N118T",2
"lib2","SARS-CoV-2","GTGAGCTCGCTAGAAC",2,42.44,10.87,0.03,0.05,3,1.01,0,">1 nonsynonymous","A42Q L60Y Q84E",3
"lib2","SARS-CoV-2","GTGAGCTGTCGTATCA",4,29.03,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K56I S69G S129C T170A",4
"lib2","SARS-CoV-2","GTGAGCTGTGTTCCGA",2,162.1,10.44,-0.39,0.04,2.85,1.08,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","GTGAGGAACCGCAGGC",5,79.52,10.82,-0.02,0.08,2.88,1.04,0,"1 nonsynonymous","T85G",1
"lib2","SARS-CoV-2","GTGAGGAACTCGATAT",2,17.08,9.11,-1.73,0.23,1.82,1.13,0.03,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","GTGAGGACGTAACAGG",6,22.44,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S69R L125R F134P T148Y",4
"lib2","SARS-CoV-2","GTGAGGACTTGAATCA",3,88.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128L F134P",2
"lib2","SARS-CoV-2","GTGAGGAGAACTGAAT",6,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51N T148R N151P",3
"lib2","SARS-CoV-2","GTGAGGATCAAGATTG",2,36.29,6.47,-4.36,0.28,1.5,1.14,0.01,">1 nonsynonymous","I28P L38N",2
"lib2","SARS-CoV-2","GTGAGGCAAATGATAA",2,10.15,6.44,-4.4,0.52,1.5,1.09,0.02,">1 nonsynonymous","I28L D68A D97P",3
"lib2","SARS-CoV-2","GTGAGGCAACTCCTAC",5,56.45,6.04,-4.8,0.97,1.5,1.14,0.02,">1 nonsynonymous","S41R I80F Q163I",3
"lib2","SARS-CoV-2","GTGAGGCATATAGTAG",2,45.51,8.72,-2.12,0.14,1.5,1.05,0.01,">1 nonsynonymous","V11P V37A G51S F62Y",4
"lib2","SARS-CoV-2","GTGAGGCTCAACATAA",7,0.65,NA,NA,NA,NA,NA,NA,"stop","K48* W106R G117Y",3
"lib2","SARS-CoV-2","GTGAGGGAACCATTAT",4,71.48,10.11,-0.72,0.03,2.95,1,0,">1 nonsynonymous","C6V G146S",2
"lib2","SARS-CoV-2","GTGAGGGGGATAATGT",4,340.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G116V Y175I",2
"lib2","SARS-CoV-2","GTGAGTAAAAAAAACG",4,19.24,9.48,-1.35,0.15,2.03,1.04,0.02,">1 nonsynonymous","S29C A105Y S147L",3
"lib2","SARS-CoV-2","GTGAGTAAGGACTGGG",16,136.43,6,-4.84,0.87,1.5,1.18,0.01,">1 nonsynonymous","N4L G86R D97E",3
"lib2","SARS-CoV-2","GTGAGTACTTAAACCG",10,148.71,10.53,-0.3,0.03,2.83,1.13,0,">1 nonsynonymous","G9K D34N A42K C61R L122S N130T",6
"lib2","SARS-CoV-2","GTGAGTAGGGACAGCA",6,162.49,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C61W P149W Q176Y",3
"lib2","SARS-CoV-2","GTGAGTAGTCGATGTA",3,12.29,9.14,-1.7,0.15,2.86,1.16,0.01,">1 nonsynonymous","S41D Y119V",2
"lib2","SARS-CoV-2","GTGAGTCTCTTAGACC",4,31.03,8.4,-2.43,0.22,1.5,1.14,0.02,">1 nonsynonymous","W23K P54L V153M",3
"lib2","SARS-CoV-2","GTGAGTCTTATACTTG",4,30.13,6,-4.84,2,2.29,1.11,0,">1 nonsynonymous","I138D I142D F167T T193Y V194G S200W",6
"lib2","SARS-CoV-2","GTGAGTGAAATCTTAG",4,45.81,9.1,-1.73,0.06,2.89,1.04,0,">1 nonsynonymous","L38I L111E Y119I",3
"lib2","SARS-CoV-2","GTGAGTGCTCTGTATT",4,43.51,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G9E V37T P54L G83N F99Q G116D R127T Y165G V181N",9
"lib2","SARS-CoV-2","GTGAGTGGAGCAACTA",1,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93R F99L L131F Y159C",4
"lib2","SARS-CoV-2","GTGAGTGTAGCATACG",4,30.29,8.3,-2.53,0.23,1.59,1.03,0.02,">1 nonsynonymous","S129I G155E Y165H",3
"lib2","SARS-CoV-2","GTGAGTTAAATAGAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","C6A Y66*",2
"lib2","SARS-CoV-2","GTGAGTTACTACGCCT",5,15.59,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C61S V103F",2
"lib2","SARS-CoV-2","GTGAGTTCGTAATATA",3,79.98,10.24,-0.6,0.05,2.9,1.11,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","GTGAGTTGATACAAAG",7,34.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I88V A105L R127H",3
"lib2","SARS-CoV-2","GTGAGTTGTAATCTAT",3,18,6.07,-4.76,1.16,1.5,1.17,0.02,">1 nonsynonymous","D68T G86S D98R C102D",4
"lib2","SARS-CoV-2","GTGAGTTGTGAATAGC",9,206.33,10.84,0.01,0.04,2.89,1.09,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","GTGATAAAAGGCAAAG",7,91.61,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F12R V37R Q79M Y121N",4
"lib2","SARS-CoV-2","GTGATAAAGTTATATG",2,17.63,9.08,-1.75,0.17,1.94,1.09,0.02,">1 nonsynonymous","K94V I138Q T201L",3
"lib2","SARS-CoV-2","GTGATAAATCAATTTT",2,22.63,9.68,-1.16,0.13,2.22,1.05,0.01,"1 nonsynonymous","R136G",1
"lib2","SARS-CoV-2","GTGATAAATTCGTATA",3,24.85,10.91,0.07,0.06,3,1.01,0,">1 nonsynonymous","I2V G9S",2
"lib2","SARS-CoV-2","GTGATAAATTGTTGAC",11,162.44,8.07,-2.76,0.14,1.91,1.06,0.01,">1 nonsynonymous","K87L K114I Y121S F160L",4
"lib2","SARS-CoV-2","GTGATAACAAACAATG",8,78.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A89F R136F",2
"lib2","SARS-CoV-2","GTGATAACCTGAATGC",3,55.16,6,-4.84,1.48,1.5,1.2,0.02,">1 nonsynonymous","N30T S45R D59K N157S",4
"lib2","SARS-CoV-2","GTGATAAGACATACAA",4,47.66,6.02,-4.82,1.59,1.5,1.35,0.05,">1 nonsynonymous","I2T P161I Q168L",3
"lib2","SARS-CoV-2","GTGATAAGTCAAGATT",2,15.37,11.01,0.17,0.08,2.98,1.01,0,">1 nonsynonymous","L5E N120E S164Y",3
"lib2","SARS-CoV-2","GTGATAATATTCCCCA",11,202.63,10.83,-0.01,0.07,2.95,1.07,0,">1 nonsynonymous","V32R Y39K S43L N110K",4
"lib2","SARS-CoV-2","GTGATAATATTGCTTG",5,5.65,6.86,-3.98,2,1.5,1.21,0.04,">1 nonsynonymous","A42S L60S A81N G86K G152R",5
"lib2","SARS-CoV-2","GTGATAATCACCGTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F N107L F185R",3
"lib2","SARS-CoV-2","GTGATACACGCTATCG",2,7.43,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","A14N Y35R V77E D90G D98Y G117N S129M",7
"lib2","SARS-CoV-2","GTGATACATTCGACAG",6,0.58,NA,NA,NA,NA,NA,NA,"stop","G9E P82* K94S N120F",4
"lib2","SARS-CoV-2","GTGATACCAGACTCCC",16,190.12,10.79,-0.05,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGATACGAATACAGC",6,51.38,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","K56S T63F I88G",3
"lib2","SARS-CoV-2","GTGATACGCAGACAAA",1,42.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1K Y39P G83D G101A P161R P169T V173A",7
"lib2","SARS-CoV-2","GTGATACTAAAGTTAA",5,57.92,9.05,-1.78,0.1,1.77,1.05,0,">1 nonsynonymous","S41R G86S",2
"lib2","SARS-CoV-2","GTGATACTACAGTCGG",9,47.09,9.14,-1.69,0.14,2.01,1.02,0.01,">1 nonsynonymous","E141K P161Q",2
"lib2","SARS-CoV-2","GTGATAGAAAAAGTGC",11,1.11,NA,NA,NA,NA,NA,NA,"stop","A14* T63E K132S",3
"lib2","SARS-CoV-2","GTGATAGACAAAGGAT",3,119.34,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A105T D137I Q176S",3
"lib2","SARS-CoV-2","GTGATAGACTGATTGT",1,20.25,10.4,-0.43,0.05,3,1,0,">1 nonsynonymous","T63C K87R",2
"lib2","SARS-CoV-2","GTGATAGCAATAAAGA",3,29.32,9.86,-0.97,0.13,2.3,1.13,0.01,"1 nonsynonymous","A14P",1
"lib2","SARS-CoV-2","GTGATAGCAGTCAATA",6,46.52,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S41T K56V N92H T148S",4
"lib2","SARS-CoV-2","GTGATAGCATACCGAC",4,0.25,NA,NA,NA,NA,NA,NA,"stop","S36* D90N",2
"lib2","SARS-CoV-2","GTGATAGTGAGTGGCA",6,71.09,10.73,-0.1,0.03,2.94,1.04,0,"1 nonsynonymous","K132D",1
"lib2","SARS-CoV-2","GTGATATAAATATAAA",3,42.4,6.16,-4.68,0.87,1.5,1.16,0.04,">1 nonsynonymous","T63K G86D I142F",3
"lib2","SARS-CoV-2","GTGATATAAGTTAAAA",3,33.7,10.75,-0.09,0.06,2.89,1.12,0,"1 nonsynonymous","G152N",1
"lib2","SARS-CoV-2","GTGATATAGAGATATT",6,46.67,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V37T F70N I80G Y165W K199S",5
"lib2","SARS-CoV-2","GTGATATCTACAATAT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","F12C R25S A42Y T170M Y175*",5
"lib2","SARS-CoV-2","GTGATATGCGCTCGAC",2,2.78,NA,NA,NA,NA,NA,NA,"stop","R25* N157T",2
"lib2","SARS-CoV-2","GTGATATGTCGACGCA",9,29.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V103W K128H A145G G155E",4
"lib2","SARS-CoV-2","GTGATATTAACACTTG",6,44.6,6.07,-4.77,0.48,3,1.16,0.01,">1 nonsynonymous","N24Y V180E T201K",3
"lib2","SARS-CoV-2","GTGATATTGTCAAGGT",7,49.73,6,-4.83,1.57,1.5,1.19,0.03,">1 nonsynonymous","T85S V103S",2
"lib2","SARS-CoV-2","GTGATCAAAGTTCATT",10,80.81,8.91,-1.92,0.05,2.98,1.08,0,">1 nonsynonymous","R16M K87T Y119S",3
"lib2","SARS-CoV-2","GTGATCAAGCAAAGTA",2,48.17,10.48,-0.36,0.03,2.95,1.04,0,">1 nonsynonymous","A18K V37T P149K",3
"lib2","SARS-CoV-2","GTGATCACAAATCCCG",1,15.51,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","A33G C61Y D68R L95R",4
"lib2","SARS-CoV-2","GTGATCACACATAGAC",18,279.48,10.46,-0.38,0.04,2.8,1.1,0,">1 nonsynonymous","T3D K94A",2
"lib2","SARS-CoV-2","GTGATCACACATATCA",3,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37T L57F N92G V115T E135C V153C P169A",7
"lib2","SARS-CoV-2","GTGATCACACTAGTAC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","I80* I88Y G166D",3
"lib2","SARS-CoV-2","GTGATCAGGACACTAG",6,13.16,8.03,-2.8,0.32,1.5,1.14,0.03,">1 nonsynonymous","D34A N120C K132E",3
"lib2","SARS-CoV-2","GTGATCAGTTGCTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V115Q N120*",2
"lib2","SARS-CoV-2","GTGATCATGCTAAACA",2,23.23,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","K56A D90H S108D S129L T148I",5
"lib2","SARS-CoV-2","GTGATCCGGCCAGAAC",2,14.04,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","GTGATCCTTTCACGAG",6,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","GTGATCGAATACAGGC",7,59.14,7.85,-2.99,0.28,1.5,1.04,0.03,">1 nonsynonymous","F47G I88V",2
"lib2","SARS-CoV-2","GTGATCGCGATGCTGA",9,176.89,10.03,-0.81,0.06,2.41,1.02,0,">1 nonsynonymous","A81T D97W",2
"lib2","SARS-CoV-2","GTGATCGCTGCCGTGC",4,157.81,8.46,-2.38,0.12,2.96,1.09,0.01,">1 nonsynonymous","V37Y N157R",2
"lib2","SARS-CoV-2","GTGATCGCTGTCAAAT",5,29.65,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K94D F160L K198V",3
"lib2","SARS-CoV-2","GTGATCGCTTTCTTAG",1,85.95,9.87,-0.96,0.06,2.38,1.06,0,">1 nonsynonymous","L95T T201M",2
"lib2","SARS-CoV-2","GTGATCTTACAGTAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68W G83Q D90G",3
"lib2","SARS-CoV-2","GTGATGAAAGCACGGA",8,94.79,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P161L G172A",2
"lib2","SARS-CoV-2","GTGATGAAGAACCGCG",1,29.18,10.64,-0.19,0.06,2.71,1.23,0,"1 nonsynonymous","N58K",1
"lib2","SARS-CoV-2","GTGATGAAGCATTTTA",2,9.22,9.15,-1.69,0.09,1.83,1,0.01,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","GTGATGAATAACTATC",2,44.13,9.59,-1.25,0.05,2.86,1.15,0,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","GTGATGACGAACAATC",7,70.33,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N92V N118C",2
"lib2","SARS-CoV-2","GTGATGATACTGCTTT",1,0.31,NA,NA,NA,NA,NA,NA,"stop","I2A T15S A42T A89T C102L S108W K132*",7
"lib2","SARS-CoV-2","GTGATGATCAACCCTA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","S36Q E154* Y165I",3
"lib2","SARS-CoV-2","GTGATGATTATTTAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","A14L D68E G74* P96T D112T G174C",6
"lib2","SARS-CoV-2","GTGATGCAAGCGATCC",2,29.38,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2A V77E Q84P Y123F G152S",5
"lib2","SARS-CoV-2","GTGATGCATGTTATCT",5,36.71,7.8,-3.04,0.22,1.5,1.05,0.02,">1 nonsynonymous","E76Q A89V G146K",3
"lib2","SARS-CoV-2","GTGATGCCACTTTTGC",5,14.13,6,-4.84,2,3,1.07,0,">1 nonsynonymous","S19T A89K K132L",3
"lib2","SARS-CoV-2","GTGATGCCAGTATAAA",6,33.06,10.42,-0.41,0.05,2.93,1.05,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","GTGATGCGGGAGTAAT",10,94.83,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L38T G166A G172V",3
"lib2","SARS-CoV-2","GTGATGCGGTCCGACA",4,43.8,7.36,-3.47,0.31,1.5,1.03,0.03,">1 nonsynonymous","Y50N N58H Y123I",3
"lib2","SARS-CoV-2","GTGATGCTCGGGACAT",15,4.73,NA,NA,NA,NA,NA,NA,"stop","V37S K87* K128R",3
"lib2","SARS-CoV-2","GTGATGTGTGCTTAAA",5,67.85,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P7L P54E C61Y V180Y A190S",5
"lib2","SARS-CoV-2","GTGATGTTCATATAAA",3,104.82,10.44,-0.39,0.04,2.96,1.04,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","GTGATTAAAGACTGCT",8,341.22,10.71,-0.12,0.04,2.92,1.03,0,">1 nonsynonymous","K26T A42P E186H S200H",4
"lib2","SARS-CoV-2","GTGATTAAGACCAGTG",9,13.81,NA,NA,NA,NA,NA,NA,"stop","V32L N40*",2
"lib2","SARS-CoV-2","GTGATTAAGAGTATCT",1,8.9,6.31,-4.52,0.56,3,1.11,0.02,">1 nonsynonymous","S19R F99W E186V",3
"lib2","SARS-CoV-2","GTGATTACGACAGCCG",21,319.24,10.97,0.13,0.04,2.91,1.1,0,">1 nonsynonymous","Y39F T85R",2
"lib2","SARS-CoV-2","GTGATTACTCAAAAGC",19,81.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T46H T63V T85C D90E R136H P161Y",6
"lib2","SARS-CoV-2","GTGATTAGATCAAGTG",14,94.4,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2S P133C V180Y",3
"lib2","SARS-CoV-2","GTGATTAGCGCTCTAA",9,94.62,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37F D97P Y123P",3
"lib2","SARS-CoV-2","GTGATTAGTCTTACAA",1,22.95,6.55,-4.28,0.46,1.5,1.19,0.02,">1 nonsynonymous","N1G F44C L60P D97S T201N",5
"lib2","SARS-CoV-2","GTGATTAGTTATTTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50R E141T V181*",3
"lib2","SARS-CoV-2","GTGATTATTGGTTAAG",6,44.06,10.58,-0.26,0.04,2.87,1.1,0,"1 nonsynonymous","R78L",1
"lib2","SARS-CoV-2","GTGATTCATACAAATC",10,2.79,NA,NA,NA,NA,NA,NA,"stop","C31D L122*",2
"lib2","SARS-CoV-2","GTGATTCATGATGACT",3,103.05,10.43,-0.41,0.05,2.95,1.02,0,">1 nonsynonymous","N30E D59G L122E",3
"lib2","SARS-CoV-2","GTGATTCCTAGCACAA",1,1.73,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","GTGATTCCTTAACTAA",7,33.24,9.68,-1.16,0.15,2.03,1.12,0.01,">1 nonsynonymous","A42L R136Y F160A",3
"lib2","SARS-CoV-2","GTGATTCGTTAGCCGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V L95S A105T P197A",4
"lib2","SARS-CoV-2","GTGATTCTCTTTCCGA",2,19.92,8.4,-2.43,0.07,2.03,1,0,">1 nonsynonymous","P7L A42T G74M",3
"lib2","SARS-CoV-2","GTGATTGAAACTTTTT",1,14.75,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F17K V37H L60V D68N L95A S129N",6
"lib2","SARS-CoV-2","GTGATTGAACCAAAAT",5,4.05,NA,NA,NA,NA,NA,NA,"stop","L57* D68L K94W V103M D112T F126T",6
"lib2","SARS-CoV-2","GTGATTGAATGGGCAT",1,39.56,9.45,-1.38,0.17,1.88,1.06,0.01,"1 nonsynonymous","W23N",1
"lib2","SARS-CoV-2","GTGATTGACCTTGACA",6,59.68,10.88,0.04,0.12,2.7,1.09,0,">1 nonsynonymous","P149S P197H",2
"lib2","SARS-CoV-2","GTGATTGCCGAATCGT",8,54.48,6,-4.84,2,3,1.09,0,">1 nonsynonymous","K26A N40C N120W V182G",4
"lib2","SARS-CoV-2","GTGATTGGGTTTAATA",3,46.79,9.62,-1.22,0.07,2.37,1.06,0,">1 nonsynonymous","T15M N151P",2
"lib2","SARS-CoV-2","GTGATTGGTCATACAT",6,78.73,6.02,-4.82,0.59,1.5,1.16,0.01,">1 nonsynonymous","R73M Y121K I142N",3
"lib2","SARS-CoV-2","GTGATTTGACCGCGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I A89F",2
"lib2","SARS-CoV-2","GTGATTTGTCGTCGAC",7,23.66,NA,NA,NA,NA,NA,NA,"stop","D34G K128G K199*",3
"lib2","SARS-CoV-2","GTGATTTTAAGTTCTT",5,1.45,NA,NA,NA,NA,NA,NA,"stop","Y35R I88*",2
"lib2","SARS-CoV-2","GTGATTTTATGAGTAT",5,40.95,10.14,-0.7,0.08,2.58,1,0,">1 nonsynonymous","V37Y D90G K199L",3
"lib2","SARS-CoV-2","GTGCAAAAATCTTACA",2,49.18,9.89,-0.95,0.06,2.16,1.03,0,">1 nonsynonymous","I28A I80V",2
"lib2","SARS-CoV-2","GTGCAAAACATATCTG",5,30.26,10.37,-0.47,0.06,2.76,1.12,0,">1 nonsynonymous","N1V D97G Q168S",3
"lib2","SARS-CoV-2","GTGCAAAAGCGAAAGT",6,202.87,10.57,-0.26,0.04,2.91,1.07,0,">1 nonsynonymous","G9E V37R K128M E141G",4
"lib2","SARS-CoV-2","GTGCAAACTGTGATAT",2,18.68,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9I P54L D112F G117A A145L K198A",6
"lib2","SARS-CoV-2","GTGCAAAGAACGAAAG",10,27.61,6.01,-4.83,1.33,1.5,1.15,0.03,">1 nonsynonymous","Q79T Q84R G101R T140R G146L",5
"lib2","SARS-CoV-2","GTGCAAATATCCAAAT",1,80.66,10.87,0.03,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCAAATGAATCAAG",3,111.82,10.86,0.02,0.04,2.93,1.08,0,">1 nonsynonymous","D59Y K198M",2
"lib2","SARS-CoV-2","GTGCAAATTCATTATT",6,96.67,10.61,-0.23,0.05,2.97,1.05,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","GTGCAACAACGACTCA",2,13.26,6,-4.84,2,3,1.12,0,"1 nonsynonymous","V180Q",1
"lib2","SARS-CoV-2","GTGCAACAAGCTCATA",8,14.42,7.87,-2.97,0.39,1.5,1.36,0.07,">1 nonsynonymous","P54W G116R R127M",3
"lib2","SARS-CoV-2","GTGCAACAATACTAAG",10,94.31,6,-4.84,2,3,1.27,0,">1 nonsynonymous","P7N G101E",2
"lib2","SARS-CoV-2","GTGCAACAGAGGAGTG",4,126.18,10.62,-0.22,0.05,2.9,1.08,0,">1 nonsynonymous","I2A P54S C61Y",3
"lib2","SARS-CoV-2","GTGCAACCAAGTTCGA",11,106.71,8.45,-2.39,0.12,1.86,1.1,0.01,">1 nonsynonymous","F44I G74F",2
"lib2","SARS-CoV-2","GTGCAACCATCATATC",7,0.18,NA,NA,NA,NA,NA,NA,"stop","N1E G9* N24V S69N D97C V103E K114M Y159T G166F",9
"lib2","SARS-CoV-2","GTGCAACGAATTATGC",3,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q G83M V103P",3
"lib2","SARS-CoV-2","GTGCAACGCCTGAACG",4,90.51,10.36,-0.48,0.06,2.88,1.07,0,"1 nonsynonymous","G174T",1
"lib2","SARS-CoV-2","GTGCAAGAGCATATCT",4,47.41,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9P A18M K94S V173N",4
"lib2","SARS-CoV-2","GTGCAAGATCAAGACT",1,48.03,10.81,-0.02,0.07,2.92,1.06,0,">1 nonsynonymous","L5P E135D",2
"lib2","SARS-CoV-2","GTGCAATAATAAAAAG",7,31.54,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V52N G101C L122A",3
"lib2","SARS-CoV-2","GTGCAATACAGAAAAA",6,47.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A22Y F167S",2
"lib2","SARS-CoV-2","GTGCAATACTGCACAC",4,12.92,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","S29H L183S",2
"lib2","SARS-CoV-2","GTGCAATATAATTCAC",3,22.27,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91W S129M L162M F185T",4
"lib2","SARS-CoV-2","GTGCAATCTAAGACAG",2,6.09,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T3Y A14M V77M D97L K132I T140N T201D",7
"lib2","SARS-CoV-2","GTGCAATCTTTAATTC",3,38.2,6.73,-4.11,0.21,1.5,1.08,0.01,">1 nonsynonymous","C6I S113C T148N",3
"lib2","SARS-CoV-2","GTGCAATGAAGGTGCA",5,92.19,6.82,-4.02,0.3,1.5,1.16,0.02,">1 nonsynonymous","R16D Y91R N120T",3
"lib2","SARS-CoV-2","GTGCAATTGCAAACGA",3,46.8,6.78,-4.06,0.26,1.5,1.14,0.01,">1 nonsynonymous","S36L N107S L131F Q163K",4
"lib2","SARS-CoV-2","GTGCACAAGTGCTCAA",25,271.16,8.33,-2.5,0.13,2.59,1.09,0.01,">1 nonsynonymous","S41L N64K V77L Y119E F156Y",5
"lib2","SARS-CoV-2","GTGCACAATCGAGAGG",3,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102P I138Y Q168L",3
"lib2","SARS-CoV-2","GTGCACATAGCGAGTG",4,98.75,10.86,0.03,0.06,2.94,1.07,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","GTGCACATCTATCCGG",1,13.68,7.33,-3.51,0.27,1.5,1,0.02,">1 nonsynonymous","D34L V153N G166L K199E",4
"lib2","SARS-CoV-2","GTGCACCAAACAAATA",17,10.05,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","W23L C31S S41E I104K G116E L131G V173T",7
"lib2","SARS-CoV-2","GTGCACCACTGACAAA",9,98.48,10.41,-0.43,0.06,2.82,1.06,0,">1 nonsynonymous","N1R S45R",2
"lib2","SARS-CoV-2","GTGCACCCCCAATACT",3,85.7,10.07,-0.77,0.04,2.82,1.04,0,">1 nonsynonymous","C6E G83K",2
"lib2","SARS-CoV-2","GTGCACCGAATCCTAA",9,128.95,10.87,0.03,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCACCTAACTACAT",2,0.03,NA,NA,NA,NA,NA,NA,"stop","Y50* K56M Y178R",3
"lib2","SARS-CoV-2","GTGCACCTTGATGTGC",1,2.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTGCACGGGGCCACCG",2,8.94,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11E I28H Y93T E135N P169G",5
"lib2","SARS-CoV-2","GTGCACTAATTCTAAT",4,16.23,6.36,-4.48,0.61,1.5,1.15,0.05,">1 nonsynonymous","C49E G83V I88V I142Y",4
"lib2","SARS-CoV-2","GTGCACTAGTAGGCCG",7,92.53,10.07,-0.76,0.07,2.7,1.04,0,">1 nonsynonymous","C31R N64R",2
"lib2","SARS-CoV-2","GTGCACTTTGTATTGA",1,13.82,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A22S D34E V103R",3
"lib2","SARS-CoV-2","GTGCAGAGGACACAAC",5,7.98,NA,NA,NA,NA,NA,0.17,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","GTGCAGATACGCTGGA",7,46.06,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V52L Y66S F99A Y121L Q144Y",5
"lib2","SARS-CoV-2","GTGCAGATGTGCAAGT",16,83.34,6.09,-4.75,0.69,1.5,1.13,0.01,">1 nonsynonymous","D98K L131K",2
"lib2","SARS-CoV-2","GTGCAGCGGACTCCTA",3,35.78,10.19,-0.64,0.11,2.53,1,0.01,">1 nonsynonymous","W106R A192P K198G",3
"lib2","SARS-CoV-2","GTGCAGCGGCCCATAC",4,40.46,8.34,-2.5,0.15,1.92,1.04,0.01,">1 nonsynonymous","A89V N151L N171L K198W",4
"lib2","SARS-CoV-2","GTGCAGCTGACTCCCA",1,57.71,10.47,-0.36,0.04,2.93,1.07,0,">1 nonsynonymous","C61I D90S",2
"lib2","SARS-CoV-2","GTGCAGGCAATACCTG",3,96.44,8.44,-2.39,0.11,2.25,1.05,0,">1 nonsynonymous","N40V G146K Q168F",3
"lib2","SARS-CoV-2","GTGCAGTAAGTTGGTA",3,40.05,9.97,-0.87,0.08,2.61,1.07,0,">1 nonsynonymous","A33P F44L N120F",3
"lib2","SARS-CoV-2","GTGCAGTATGTTTAGA",1,39.83,10.07,-0.77,0.1,2.69,1.09,0.01,">1 nonsynonymous","V11C V32H S41N P54I T201M",5
"lib2","SARS-CoV-2","GTGCAGTCTCTATCCA",4,57.05,10.8,-0.04,0.05,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGCAGTGATAGAATA",3,20.47,9.76,-1.08,0.04,2.93,1.02,0,">1 nonsynonymous","S113G Y121L",2
"lib2","SARS-CoV-2","GTGCAGTTACTTATGT",4,16.42,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","P7G Q144W C158G V181H",4
"lib2","SARS-CoV-2","GTGCATAACATCGCAG",5,16.65,6,-4.84,2,1.5,1.03,0.01,"1 nonsynonymous","L183G",1
"lib2","SARS-CoV-2","GTGCATACAATTTGCC",4,64.07,8.8,-2.04,0.15,1.88,1.13,0.01,">1 nonsynonymous","N4A F44N S139V",3
"lib2","SARS-CoV-2","GTGCATAGAGTGAAAA",6,25.54,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L60I L95G",2
"lib2","SARS-CoV-2","GTGCATATAACTACAG",6,20.58,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","E10G C61S T100H Y121N Y143M",5
"lib2","SARS-CoV-2","GTGCATATACGACCGC",4,36.49,6.67,-4.17,0.67,1.5,1.21,0.05,">1 nonsynonymous","A14Y L95T I104Y",3
"lib2","SARS-CoV-2","GTGCATCTGGAAAGCA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","F8* S19Y K128A I142D",4
"lib2","SARS-CoV-2","GTGCATGCAGAGAGGA",1,11.43,7.07,-3.77,0.52,1.5,1.19,0.08,">1 nonsynonymous","A14M N40P V52A P149H",4
"lib2","SARS-CoV-2","GTGCATTAAAGCCCCT",4,53.7,10.75,-0.09,0.05,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCATTATTAATAAC",1,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S S41L V71L D90L S139V T201N",6
"lib2","SARS-CoV-2","GTGCATTCTTAACACC",5,60.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2W N107S Y143I",3
"lib2","SARS-CoV-2","GTGCATTTTGCCTGCC",4,14.27,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","D34A T46S K56S A81I Y121L R136S T170I",7
"lib2","SARS-CoV-2","GTGCCAAAAACCTGCA",7,47.95,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T15V P54V I88L K94E Q144Y Y165M Y175A",7
"lib2","SARS-CoV-2","GTGCCAACAACCGAGC",1,6.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V32L N118C R136V T201L",4
"lib2","SARS-CoV-2","GTGCCAACAACGATGC",9,62.88,8.48,-2.35,0.16,1.5,1.1,0.01,"1 nonsynonymous","P96F",1
"lib2","SARS-CoV-2","GTGCCAACGTGGAAAA",2,19.05,6,-4.84,2,3,1.12,0.03,">1 nonsynonymous","N40S C49A A89G Y123A",4
"lib2","SARS-CoV-2","GTGCCAAGATCATTTG",7,14.87,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F70E W106T",2
"lib2","SARS-CoV-2","GTGCCAATCCAATTCC",4,113.08,8.74,-2.09,0.13,1.59,1.15,0.01,">1 nonsynonymous","F12E L122I",2
"lib2","SARS-CoV-2","GTGCCAATGATATCGA",6,34.73,6.53,-4.3,0.59,1.5,1.17,0.06,"1 nonsynonymous","L131W",1
"lib2","SARS-CoV-2","GTGCCAATTGTAGAGT",4,16.98,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T55D P96Q L122V G152V P197N",5
"lib2","SARS-CoV-2","GTGCCACAATAAGGAC",2,24.81,10.12,-0.71,0.15,2.4,1.12,0.01,">1 nonsynonymous","W106K L122H S129F",3
"lib2","SARS-CoV-2","GTGCCACATGAACGGC",3,147.64,NA,NA,NA,NA,NA,NA,"stop","L5* Y35R D98F G174N",4
"lib2","SARS-CoV-2","GTGCCACGGCTTCCCA",4,59.49,10.75,-0.09,0.08,2.89,1.13,0,"1 nonsynonymous","T55P",1
"lib2","SARS-CoV-2","GTGCCACTAGATAAGG",1,9.57,9.39,-1.44,0.23,2.54,1.05,0.02,"1 nonsynonymous","A14F",1
"lib2","SARS-CoV-2","GTGCCAGCATTCAAGG",5,51.79,10.73,-0.1,0.07,2.89,1.1,0,">1 nonsynonymous","G9S Y39V N64P",3
"lib2","SARS-CoV-2","GTGCCAGGAAGAACTC",23,119.28,8.96,-1.88,0.16,1.57,1.13,0.01,">1 nonsynonymous","G9L L57R Q84S S147Y",4
"lib2","SARS-CoV-2","GTGCCAGGCCCACCAG",1,16.29,9.47,-1.37,0.14,2.03,1.07,0.01,"1 nonsynonymous","R136G",1
"lib2","SARS-CoV-2","GTGCCAGGGAGGGCAA",2,13.1,8.45,-2.39,0.27,1.5,1.14,0.05,">1 nonsynonymous","E10W L38P",2
"lib2","SARS-CoV-2","GTGCCAGTAGAATGAC",6,38.05,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","L38P G86T I104R S184T",4
"lib2","SARS-CoV-2","GTGCCATGGCGTACGG",13,455.99,7.01,-3.83,0.27,1.5,1.1,0.02,">1 nonsynonymous","N120S Q176Y",2
"lib2","SARS-CoV-2","GTGCCATTCTCTCCTA",6,7.12,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","F62N G86R G116S K128A K132M L183P",6
"lib2","SARS-CoV-2","GTGCCATTGGCGGGGT",6,22.47,9.71,-1.13,0.09,2.52,1.05,0,">1 nonsynonymous","P54V K132P S139D",3
"lib2","SARS-CoV-2","GTGCCCACAGAACCTA",10,185.59,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31L A89P D97S D137L Y175Q",5
"lib2","SARS-CoV-2","GTGCCCACATATTAAA",2,11.37,10.97,0.14,0.1,3,1,0,"1 nonsynonymous","Q84T",1
"lib2","SARS-CoV-2","GTGCCCACCCATTAAA",8,54.85,10.87,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCCCACCCTCCCCA",11,290.38,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","K26T T55Y L125K T170E",4
"lib2","SARS-CoV-2","GTGCCCATCAAATAAC",1,1.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTGCCCCAAAAATAAA",7,135.59,10.91,0.07,0.04,2.94,1.06,0,"1 nonsynonymous","S129Q",1
"lib2","SARS-CoV-2","GTGCCCGAGTGCCTAG",15,8.86,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T55H C61S W106C S129N F160Y",5
"lib2","SARS-CoV-2","GTGCCCGCCTCGACGG",4,22.34,6.13,-4.71,1.03,1.5,1.29,0.04,">1 nonsynonymous","A14V K87Y S113F Y121M K128R",5
"lib2","SARS-CoV-2","GTGCCCGGAGTTGAGA",8,65.28,10.71,-0.13,0.02,3,1.02,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","GTGCCCGTAAATCGCT",8,75.82,7.33,-3.51,0.36,1.5,1.04,0.04,">1 nonsynonymous","R16I W23R A33T P54E",4
"lib2","SARS-CoV-2","GTGCCCGTGATTTTAA",3,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M L57R P96K T100M T201Y",5
"lib2","SARS-CoV-2","GTGCCCTTCCGAGTTA",1,17.47,7.06,-3.77,0.42,1.5,1.03,0.04,">1 nonsynonymous","I28L Y50T N58T Y123M S129N",5
"lib2","SARS-CoV-2","GTGCCCTTTAGATAGT",10,209.03,10.8,-0.04,0.04,2.95,1.06,0,"1 nonsynonymous","R27L",1
"lib2","SARS-CoV-2","GTGCCGAAAAGCAAAT",7,89.58,9.7,-1.14,0.04,2.87,1.1,0,">1 nonsynonymous","D98Y S113A G166A",3
"lib2","SARS-CoV-2","GTGCCGAATATAATAA",5,44.63,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A33Q I88F L125V G146Q",4
"lib2","SARS-CoV-2","GTGCCGACATACACAA",4,0.14,NA,NA,NA,NA,NA,NA,"stop","S36Y P96R N151*",3
"lib2","SARS-CoV-2","GTGCCGCATCTAAAAC",9,236.71,10.65,-0.19,0.09,2.78,1.09,0,"1 nonsynonymous","N24V",1
"lib2","SARS-CoV-2","GTGCCGCATGAAGGGA",4,51.29,8.5,-2.34,0.18,1.76,1.07,0.01,">1 nonsynonymous","G9T R27C Y35V N64Y Y121H P149A F160V",7
"lib2","SARS-CoV-2","GTGCCGGACAATGAGG",18,151.99,10.52,-0.32,0.03,2.92,1.02,0,">1 nonsynonymous","L60I A81G",2
"lib2","SARS-CoV-2","GTGCCGGACACTAGTA",2,28.78,10.96,0.12,0.06,2.96,1.04,0,">1 nonsynonymous","L122E E154K",2
"lib2","SARS-CoV-2","GTGCCTAAAAAATTAA",3,66.03,10.8,-0.03,0.04,2.97,1.04,0,">1 nonsynonymous","N120A E141I",2
"lib2","SARS-CoV-2","GTGCCTAAACTAAATT",5,0.31,NA,NA,NA,NA,NA,NA,"stop","L5P T100* S113D G155Q N171Y",5
"lib2","SARS-CoV-2","GTGCCTAACAAACCTA",2,29.29,6.01,-4.83,0.38,3,1.1,0,">1 nonsynonymous","S19R S43M Y119P G152C",4
"lib2","SARS-CoV-2","GTGCCTAATCGTGGGC",2,6.95,7.86,-2.98,0.46,1.5,1.08,0.05,">1 nonsynonymous","G83C W106C",2
"lib2","SARS-CoV-2","GTGCCTACGAGGCAGA",1,23.37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R27L Y39M A81P K94L",4
"lib2","SARS-CoV-2","GTGCCTAGCAGCGGTG",2,0.05,NA,NA,NA,NA,NA,NA,"stop","F8N D98S L122* G146K",4
"lib2","SARS-CoV-2","GTGCCTAGGTAACCAC",8,92.83,8.88,-1.96,0.05,2.81,1.07,0,">1 nonsynonymous","G146A F156Y Q168T",3
"lib2","SARS-CoV-2","GTGCCTATCGGCACAA",4,21.43,7.68,-3.16,0.13,2.04,1.14,0,">1 nonsynonymous","F44L G83V V173G",3
"lib2","SARS-CoV-2","GTGCCTATTTCATATC",2,5.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","GTGCCTATTTCTATCC",3,26.83,10.55,-0.29,0.07,2.94,1.08,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","GTGCCTCCATGCATAG",3,10.69,8.59,-2.24,0.23,2.43,1.04,0.02,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","GTGCCTCCCGCCAGGA",13,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55H K128R T140I",3
"lib2","SARS-CoV-2","GTGCCTCGACCTCAAC",11,55.78,8.13,-2.7,0.27,1.5,1.1,0.04,">1 nonsynonymous","T85K F99T D112Y Y165V",4
"lib2","SARS-CoV-2","GTGCCTGTAAGTTTAT",10,256.24,10.78,-0.05,0.05,2.89,1.11,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","GTGCCTTCAAAACGAT",1,74.76,9.82,-1.01,0.06,2.88,1.11,0,"1 nonsynonymous","Q176H",1
"lib2","SARS-CoV-2","GTGCCTTTACCATTTC",8,80.21,10.66,-0.17,0.04,2.94,1.07,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","GTGCGAAATACAAGCG",3,1.28,NA,NA,NA,NA,NA,NA,"stop","Y39S P54T N157*",3
"lib2","SARS-CoV-2","GTGCGAAATACCTCAA",8,12.28,NA,NA,NA,NA,NA,NA,"stop","F8V V115* S200V",3
"lib2","SARS-CoV-2","GTGCGAACGTGAAAAT",13,149.48,10.99,0.15,0.06,2.91,1.07,0,">1 nonsynonymous","L122S T201P",2
"lib2","SARS-CoV-2","GTGCGACGAGGCGGGG",3,10.27,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","T100P G152S",2
"lib2","SARS-CoV-2","GTGCGAGAACTATCAT",4,87.41,10.77,-0.06,0.05,3,1,0,">1 nonsynonymous","T3S C61T",2
"lib2","SARS-CoV-2","GTGCGAGATTCAATTT",7,26.8,10.04,-0.79,0.14,2.12,1.03,0.01,">1 nonsynonymous","Y50C V173L",2
"lib2","SARS-CoV-2","GTGCGAGCCGTAATCG",4,39.8,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C61S R124Q T201P",3
"lib2","SARS-CoV-2","GTGCGAGGATTTTCGG",5,64.29,10.4,-0.44,0.05,2.78,1.21,0,">1 nonsynonymous","T63L Q84R",2
"lib2","SARS-CoV-2","GTGCGATAGTGTAGCA",1,12.05,6.11,-4.73,1.58,1.5,1.33,0.06,">1 nonsynonymous","F99P L122T K128E",3
"lib2","SARS-CoV-2","GTGCGATGCTGCCATA",5,28.96,8.92,-1.92,0.15,1.62,1.05,0.01,">1 nonsynonymous","I2V Y35M G86E D90T",4
"lib2","SARS-CoV-2","GTGCGCAAATCAATCG",16,43.95,6.19,-4.64,0.65,1.5,1.17,0.01,">1 nonsynonymous","E10T N58F L131R V182M",4
"lib2","SARS-CoV-2","GTGCGCAGACGCGTTC",4,0.29,NA,NA,NA,NA,NA,NA,"stop","R25T Y35T G83* T148N P149K",5
"lib2","SARS-CoV-2","GTGCGCAGAGCGAAAT",1,20.46,8.78,-2.06,0.13,2.99,1.04,0.02,">1 nonsynonymous","N109Y L125W",2
"lib2","SARS-CoV-2","GTGCGCAGTAATTTAT",5,301.48,10.68,-0.15,0.03,2.95,1.07,0,">1 nonsynonymous","L5P F44M",2
"lib2","SARS-CoV-2","GTGCGCCAACCGACCA",1,11.69,9.7,-1.13,0.17,2.24,1.08,0.01,">1 nonsynonymous","C61D A105V V173W",3
"lib2","SARS-CoV-2","GTGCGCCACGATCGCA",19,89.73,6.45,-4.39,0.29,1.58,1.13,0.01,">1 nonsynonymous","A42P F62V N130W T148F Y165L",5
"lib2","SARS-CoV-2","GTGCGCCCGTGGCGTC",9,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M G155D Y165S T201E",4
"lib2","SARS-CoV-2","GTGCGCGATGCGTTAG",2,16.74,6.39,-4.45,0.65,1.5,1.07,0.03,">1 nonsynonymous","N1S S45N C61G Y143S",4
"lib2","SARS-CoV-2","GTGCGCGGCGACCTGA",8,56.28,6,-4.84,0.99,1.5,1.22,0.01,">1 nonsynonymous","R27L V32E L57A K128N F185N",5
"lib2","SARS-CoV-2","GTGCGCGTGATAAATG",13,69.96,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V20S K48Y K56P A190S",4
"lib2","SARS-CoV-2","GTGCGCTCTACTACAA",14,10.84,NA,NA,NA,NA,NA,NA,"stop","D90P F99*",2
"lib2","SARS-CoV-2","GTGCGCTTAACGGCGA",3,41.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L V52L E141T",3
"lib2","SARS-CoV-2","GTGCGGAAGGCGTTAC",6,21.66,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I2F K56P L95N K128V",4
"lib2","SARS-CoV-2","GTGCGGAATATTGGAG",3,14.78,10.19,-0.64,0.19,2.44,1.06,0.02,">1 nonsynonymous","D34R H189R",2
"lib2","SARS-CoV-2","GTGCGGAATCTGGTCT",1,12,10.78,-0.06,0.08,2.99,1.07,0,"1 nonsynonymous","Y39C",1
"lib2","SARS-CoV-2","GTGCGGAGAGTGTAAA",1,33.52,8.65,-2.18,0.17,1.76,1.09,0.01,">1 nonsynonymous","V77F G83R K128S",3
"lib2","SARS-CoV-2","GTGCGGAGCAAAACAA",3,145.78,10.3,-0.54,0.03,2.94,1.05,0,">1 nonsynonymous","V37Y T170Q",2
"lib2","SARS-CoV-2","GTGCGGATTCTAGTTA",7,0.36,NA,NA,NA,NA,NA,NA,"stop","V71* P96F P177I",3
"lib2","SARS-CoV-2","GTGCGGCAGCAATGGC",1,8.2,10.65,-0.18,0.07,2.94,1.04,0,">1 nonsynonymous","C61Q A81G",2
"lib2","SARS-CoV-2","GTGCGGCTAGTTCCTA",2,33.19,9.44,-1.4,0.07,1.92,1.06,0,">1 nonsynonymous","F17G K132S",2
"lib2","SARS-CoV-2","GTGCGGTATTCGATAA",7,3.92,NA,NA,NA,NA,NA,NA,"stop","N30* V71R Q84S F134E",4
"lib2","SARS-CoV-2","GTGCGGTCCCCAGAAT",6,0,NA,NA,NA,NA,NA,NA,"stop","V37* N118Q",2
"lib2","SARS-CoV-2","GTGCGTGCCTGGATCC",2,2.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","GTGCGTGGGCTGTATA",1,15.92,10.38,-0.45,0.08,2.96,1.05,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","GTGCGTGTGCTTGTTC",1,14.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L5M F70G",2
"lib2","SARS-CoV-2","GTGCGTTATAACACAC",2,9.81,9.36,-1.48,0.31,2.11,1.12,0.04,">1 nonsynonymous","F12L S69W G196S",3
"lib2","SARS-CoV-2","GTGCTAAAATATACTA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","I80G Y119L G146L F160*",4
"lib2","SARS-CoV-2","GTGCTAAACCTTTACA",1,46.21,9.91,-0.93,0.07,2.12,1.02,0,">1 nonsynonymous","L57C D97S K128D",3
"lib2","SARS-CoV-2","GTGCTAACCAAGAAAA",7,40.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33E S41V C102F N120R K128L",5
"lib2","SARS-CoV-2","GTGCTAAGCATGATTA",2,34.66,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","E10D G116W Q176P K199V",4
"lib2","SARS-CoV-2","GTGCTAATGTAGAATA",2,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N T170L",2
"lib2","SARS-CoV-2","GTGCTACAACAATAAT",3,77.36,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G86D Y175T V181D",3
"lib2","SARS-CoV-2","GTGCTACTGAAATCGC",4,3.18,NA,NA,NA,NA,NA,NA,"stop","L122* Y165C",2
"lib2","SARS-CoV-2","GTGCTAGTAATATGTA",1,52.78,10.2,-0.64,0.06,2.86,1,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","GTGCTATAAATAAAAC",6,2.01,NA,NA,NA,NA,NA,NA,"stop","E76N I88M N118H S184*",4
"lib2","SARS-CoV-2","GTGCTATAACTCTTAT",2,40.08,8.72,-2.12,0.15,2.49,1.08,0.01,">1 nonsynonymous","C61G S113V S200V",3
"lib2","SARS-CoV-2","GTGCTATGACAAAATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23F",1
"lib2","SARS-CoV-2","GTGCTATGCTAGACTT",11,137.5,10.84,0,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCTATTGAAAAAAA",2,35.92,10.81,-0.03,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCTATTGTCATTCT",2,25.35,9.14,-1.7,0.24,1.68,1.17,0.02,">1 nonsynonymous","N24P L131M",2
"lib2","SARS-CoV-2","GTGCTATTTACGGGAG",4,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100A A105Y G117W V180C",4
"lib2","SARS-CoV-2","GTGCTCAAAGTAATCA",16,134.94,10.72,-0.12,0.04,2.91,1.1,0,">1 nonsynonymous","V37S C61L V153Y",3
"lib2","SARS-CoV-2","GTGCTCACCAGAGCAT",12,97.52,10.65,-0.18,0.07,2.9,1.12,0,">1 nonsynonymous","N1L L5Y",2
"lib2","SARS-CoV-2","GTGCTCACGAACACAG",14,58.94,9.38,-1.45,0.13,1.6,1.08,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","GTGCTCCAAAAGAATG",1,16.11,10.02,-0.82,0.09,2.88,1.04,0,">1 nonsynonymous","G9S A14R N110P",3
"lib2","SARS-CoV-2","GTGCTCCCAATTAGAA",3,11.08,7.64,-3.2,0.33,1.84,1.11,0.03,">1 nonsynonymous","W23M I88V T100R",3
"lib2","SARS-CoV-2","GTGCTCCCTTTAGACT",4,0.49,NA,NA,NA,NA,NA,NA,"stop","N64S G86*",2
"lib2","SARS-CoV-2","GTGCTCCGCTTTTGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V Y35S W106S E141Y P149L",5
"lib2","SARS-CoV-2","GTGCTCCGGGCGGGAT",4,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S N110S",2
"lib2","SARS-CoV-2","GTGCTCGAGGAACTAT",6,11.33,NA,NA,NA,NA,NA,NA,"stop","T15V R27* T170L",3
"lib2","SARS-CoV-2","GTGCTCGATTCCCTGC",9,110.51,10.78,-0.05,0.04,2.96,1.07,0,"1 nonsynonymous","S129A",1
"lib2","SARS-CoV-2","GTGCTCGCTAGACGCA",1,23.48,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6Y V37W P82T L95I G116S N151K",6
"lib2","SARS-CoV-2","GTGCTCGCTCATTTCC",2,43.22,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I28N T63S L95I L162W",4
"lib2","SARS-CoV-2","GTGCTCGGGAGATAAG",2,13.36,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N4V C49R I88S Y93H G101L G146D",6
"lib2","SARS-CoV-2","GTGCTCGTTATATAAA",15,118.83,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","D90S Y121M G146L",3
"lib2","SARS-CoV-2","GTGCTGAACGAAAAAA",2,46.64,9.09,-1.75,0.13,1.58,1.08,0.01,">1 nonsynonymous","F12L S36C L131M",3
"lib2","SARS-CoV-2","GTGCTGAATGTCTGAT",5,32.53,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N64Y L95P I104S C150Y P197S",5
"lib2","SARS-CoV-2","GTGCTGACGCCATAAT",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106E N151L",2
"lib2","SARS-CoV-2","GTGCTGAGAAAAAACT",11,173.46,10.83,-0.01,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGCTGAGACTACCAA",3,19.36,8.95,-1.88,0.18,1.64,1.1,0.02,">1 nonsynonymous","T3E R27E T100M Y165L",4
"lib2","SARS-CoV-2","GTGCTGAGGAGAAGTG",6,0.76,NA,NA,NA,NA,NA,NA,"stop","G9N S19* K26L L60Y L188M P197Q",6
"lib2","SARS-CoV-2","GTGCTGATATCCCTAT",13,207.27,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4M I28N F47Y K56D",4
"lib2","SARS-CoV-2","GTGCTGATTTAACCAT",7,65.37,8.33,-2.51,0.19,2.57,1.1,0.01,">1 nonsynonymous","N157R N171S",2
"lib2","SARS-CoV-2","GTGCTGCCAAACATTG",9,139,10.48,-0.35,0.05,2.91,1.03,0,">1 nonsynonymous","A42Q T100D S129T",3
"lib2","SARS-CoV-2","GTGCTGTCCTCTGGGG",3,1.22,NA,NA,NA,NA,NA,NA,"stop","W23* K56* P149T",3
"lib2","SARS-CoV-2","GTGCTTAAAATTTTTC",3,50.3,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D68I K87S N107V L162F",4
"lib2","SARS-CoV-2","GTGCTTAAACTAATTT",5,5.88,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib2","SARS-CoV-2","GTGCTTAATACCCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","I28L L60* R127D C158V",4
"lib2","SARS-CoV-2","GTGCTTATCCATTATA",3,75.48,10.56,-0.27,0.06,2.87,1.09,0,">1 nonsynonymous","R27Q N130W",2
"lib2","SARS-CoV-2","GTGCTTCAAATAAACA",6,84.38,6.17,-4.66,0.69,1.5,1.17,0.02,">1 nonsynonymous","S108H N171C",2
"lib2","SARS-CoV-2","GTGCTTCATAGCAAAG",4,5.88,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K56L P82S E135V",3
"lib2","SARS-CoV-2","GTGCTTCATCACGTTC",3,0.35,NA,NA,NA,NA,NA,NA,"stop","N13M G74* D90L R136S T170S",5
"lib2","SARS-CoV-2","GTGCTTCGACCACGTG",5,17.3,6,-4.84,2,3,1.12,0,">1 nonsynonymous","F12L S19K C61A A81K T140H S184F",6
"lib2","SARS-CoV-2","GTGCTTCGTAACAAAG",3,87.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K48F Y175K",2
"lib2","SARS-CoV-2","GTGCTTGAAATAACTT",5,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L I80N P133R T140H",4
"lib2","SARS-CoV-2","GTGCTTGCAATGATGG",2,139.26,9.79,-1.05,0.03,2.93,1.06,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","GTGCTTTATCACTTAG",4,107.03,8.89,-1.95,0.05,2.94,1.06,0,">1 nonsynonymous","Y91W F126I T201I",3
"lib2","SARS-CoV-2","GTGCTTTATGGCATAA",2,28.67,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T55A S69M K87L S113N S139Q G152Y",6
"lib2","SARS-CoV-2","GTGCTTTTATTCTTTG",3,24.4,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","V103F P177K",2
"lib2","SARS-CoV-2","GTGGAAAAAGCAAACT",1,51.6,7.57,-3.27,0.27,1.64,1.17,0.02,">1 nonsynonymous","G86M N110I T148S",3
"lib2","SARS-CoV-2","GTGGAAAATCTTACGA",1,1.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19K",1
"lib2","SARS-CoV-2","GTGGAAACTAAACGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14E D34Y P149N A190V",4
"lib2","SARS-CoV-2","GTGGAAAGACCTATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61R Y143*",2
"lib2","SARS-CoV-2","GTGGAAATAAAGAAAA",3,7.05,6,-4.84,0.99,3,1.2,0.01,">1 nonsynonymous","N4Q N92F",2
"lib2","SARS-CoV-2","GTGGAAATAATCATTG",1,22.18,10.8,-0.04,0.07,3,1.01,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","GTGGAAATGTCCTGGT",14,11.56,NA,NA,NA,NA,NA,NA,"stop","I88E C102R P149N S164*",4
"lib2","SARS-CoV-2","GTGGAACATGACCGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S N13S F62G",3
"lib2","SARS-CoV-2","GTGGAACTTACCATCC",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S D75G G146P",3
"lib2","SARS-CoV-2","GTGGAAGAGGGGTCAA",4,2.17,NA,NA,NA,NA,NA,NA,"stop","T15S D97S Y175*",3
"lib2","SARS-CoV-2","GTGGAAGATAATCAAG",8,144.5,10.87,0.03,0.03,3,1.02,0,">1 nonsynonymous","D59E L122R",2
"lib2","SARS-CoV-2","GTGGAAGGTATGCGAA",18,141.64,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","C6D C61W K87M Y121R",4
"lib2","SARS-CoV-2","GTGGAAGTAAATACCA",1,27.07,10.7,-0.14,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGAAGTCACTAATG",2,24.09,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F44N V77T D90Y K114T T170H",5
"lib2","SARS-CoV-2","GTGGAATAAATGATAA",7,44.36,10.71,-0.12,0.08,2.93,1.07,0,"1 nonsynonymous","K56G",1
"lib2","SARS-CoV-2","GTGGAATAATTCAGTA",6,97.32,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R16S S29L F134R P161T",4
"lib2","SARS-CoV-2","GTGGAATCCAACACAG",6,78.96,9.02,-1.82,0.11,1.5,1.06,0.01,">1 nonsynonymous","A89R S147Y",2
"lib2","SARS-CoV-2","GTGGAATCCAGTGCTA",1,23.79,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N92S K114R P169Q Q176M",4
"lib2","SARS-CoV-2","GTGGACAAAAGAAAAT",15,256.27,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F70K Q176H",2
"lib2","SARS-CoV-2","GTGGACATCTGTGACT",3,64.9,6,-4.84,2,3,1.2,0,"1 nonsynonymous","I88N",1
"lib2","SARS-CoV-2","GTGGACCAAGATTACA",4,54.42,10.76,-0.08,0.05,3,1.02,0,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","GTGGACCAAGCCCGAT",6,111.75,10.87,0.04,0.04,2.92,1.09,0,">1 nonsynonymous","A33W T148S",2
"lib2","SARS-CoV-2","GTGGACCAAGTCGCTT",4,23.41,6,-4.83,1.47,1.5,1.21,0.02,">1 nonsynonymous","Y50F K56H V103R",3
"lib2","SARS-CoV-2","GTGGACCAGCAGTTAA",6,64.16,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","Y50I P149L F167M T201D",4
"lib2","SARS-CoV-2","GTGGACCCCGACTTAA",2,20.3,9.93,-0.9,0.16,2.13,1.05,0.01,">1 nonsynonymous","S45N D90G N110T",3
"lib2","SARS-CoV-2","GTGGACCCTATGGTGC",2,52.75,9.81,-1.02,0.03,2.96,1.07,0,">1 nonsynonymous","K87M G116Y",2
"lib2","SARS-CoV-2","GTGGACCGGTGCATTT",1,84.62,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","N1L Q84A G172R",3
"lib2","SARS-CoV-2","GTGGACGCCGCGAGTA",3,61.58,10.92,0.09,0.08,2.91,1.11,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","GTGGACGCTGGAGGCA",5,17.41,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","Y50N F70C Y91L F134E",4
"lib2","SARS-CoV-2","GTGGACGGACCTACCA",19,163.13,6.05,-4.78,1.21,1.5,1.3,0.03,">1 nonsynonymous","V65N D90E P169C",3
"lib2","SARS-CoV-2","GTGGACGTGCCAACTG",1,0.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","GTGGACTCGAACTACA",12,36.89,8.68,-2.16,0.16,1.81,1.13,0.01,">1 nonsynonymous","T15G N107A Q144R",3
"lib2","SARS-CoV-2","GTGGACTTACTGGTAG",3,43.58,10.75,-0.08,0.06,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGACTTATAACATC",11,76.17,7.02,-3.82,0.36,1.5,1.13,0.03,">1 nonsynonymous","A42T D137P",2
"lib2","SARS-CoV-2","GTGGAGAACAGGGTTA",1,8.78,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3W C49V A89M",3
"lib2","SARS-CoV-2","GTGGAGAAGTTATATC",12,41.39,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","R25L S113R",2
"lib2","SARS-CoV-2","GTGGAGACAAAACCCG",3,36.41,10.88,0.05,0.03,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGGAGACCAAAACTG",3,31.48,9.7,-1.13,0.08,2.54,1.08,0,">1 nonsynonymous","C31F K56I",2
"lib2","SARS-CoV-2","GTGGAGCATCATATAA",2,45.78,10.83,-0.01,0.05,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGAGCCTTCTATTA",6,197.78,10.86,0.02,0.05,2.86,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGAGCTTAATGGCT",1,7.34,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","F17I T46Y I104C D137M",4
"lib2","SARS-CoV-2","GTGGAGGCCATATTCA",2,83.55,10.8,-0.04,0.05,2.87,1.09,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","GTGGAGGCGGATCTGA",5,66.02,6.15,-4.69,0.93,1.5,1.12,0.02,">1 nonsynonymous","W23H V71K G116E S139D",4
"lib2","SARS-CoV-2","GTGGAGGTGCGATAGT",3,53.14,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V52S N107I S164A T170C Q176A",5
"lib2","SARS-CoV-2","GTGGAGGTGGAGCACA",2,101.37,10.78,-0.06,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGAGTATCCCGAAA",14,63.49,6.89,-3.94,0.61,1.5,1.25,0.04,">1 nonsynonymous","F44S V77R G174V",3
"lib2","SARS-CoV-2","GTGGAGTTGCTGAGCA",2,6.89,6.14,-4.69,1,3,1.17,0.02,">1 nonsynonymous","C49V F156S C158Y S200Y",4
"lib2","SARS-CoV-2","GTGGAGTTGGAACTTA",3,70.53,10.91,0.07,0.06,2.9,1.09,0,">1 nonsynonymous","L122M P197W",2
"lib2","SARS-CoV-2","GTGGATAAAAGTCCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","GTGGATATACATCTTT",16,230.98,10.35,-0.49,0.02,2.93,1.04,0,">1 nonsynonymous","E10V G152S",2
"lib2","SARS-CoV-2","GTGGATCATACTGAAT",3,13.88,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I72L G86F K94R R136Y N171S",5
"lib2","SARS-CoV-2","GTGGATCATCCAAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R D98E V103D S129L",4
"lib2","SARS-CoV-2","GTGGATCGGCCTAGGT",2,95.68,10.75,-0.09,0.07,2.91,1.05,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","GTGGATGAAGAATATC",15,113.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9E S45P G51S G86R K114R",5
"lib2","SARS-CoV-2","GTGGATGAGACTGAAA",6,15.21,11.16,0.32,0.09,3,1,0,">1 nonsynonymous","S29E T148N S164R N171F",4
"lib2","SARS-CoV-2","GTGGATGCGAATGATT",10,235.92,10.85,0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGATGGATAAGATC",14,99.05,6.47,-4.37,0.46,1.5,1.17,0.01,">1 nonsynonymous","L38R P161G",2
"lib2","SARS-CoV-2","GTGGATGTAAATAATG",13,40.2,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T15W F70H V173R",3
"lib2","SARS-CoV-2","GTGGATGTACCTATTA",5,23.57,9.45,-1.38,0.1,2.43,1.05,0,">1 nonsynonymous","G9L C61R D90T F160Q",4
"lib2","SARS-CoV-2","GTGGATTAACAAATCG",9,84.64,9.23,-1.6,0.1,1.75,1.04,0,">1 nonsynonymous","K56T P96Q Y121L",3
"lib2","SARS-CoV-2","GTGGATTCGTACCCTT",1,44.44,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L95G Y175H",2
"lib2","SARS-CoV-2","GTGGATTCTATTAACT",4,5.64,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","N107V T140L G146K E154I",4
"lib2","SARS-CoV-2","GTGGATTGAACATCTG",2,12.17,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K87L V103P N109H G155T",4
"lib2","SARS-CoV-2","GTGGATTTAGACACAG",5,50.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56V K87C F99Y V103H S129G S139F G155F",7
"lib2","SARS-CoV-2","GTGGCAAAGCAGTATA",3,68.67,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T3E T140R Y159R Q176S",4
"lib2","SARS-CoV-2","GTGGCAAATAGCCACT",3,61.93,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S69M A89N Y119R",3
"lib2","SARS-CoV-2","GTGGCAACTAATGCCC",1,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27V C61G Y93F Y119F F167Q",5
"lib2","SARS-CoV-2","GTGGCAAGGCCTGAAA",2,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D E141G G152T V182S",4
"lib2","SARS-CoV-2","GTGGCAATAATCTTTA",2,38.4,9.88,-0.95,0.06,2.94,1.11,0,">1 nonsynonymous","L125V S200C",2
"lib2","SARS-CoV-2","GTGGCAATATACATTC",7,118.99,10.83,-0.01,0.05,2.89,1.11,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","GTGGCACCCCTCACGC",1,53.51,10.16,-0.67,0.05,2.99,1.02,0,">1 nonsynonymous","F44V Y143H",2
"lib2","SARS-CoV-2","GTGGCACGAGACTCAT",4,15.78,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","C49H Q84G D98G G101N",4
"lib2","SARS-CoV-2","GTGGCATAAACACACC",7,9.54,7.41,-3.42,0.38,1.5,1.24,0.07,">1 nonsynonymous","F8S S41Q",2
"lib2","SARS-CoV-2","GTGGCATGCTTAAATA",2,12.16,10.97,0.14,0.11,3,1.01,0,"1 nonsynonymous","A190G",1
"lib2","SARS-CoV-2","GTGGCCATAGCAAAGA",6,22.8,6.4,-4.44,0.5,2.42,1.25,0.02,">1 nonsynonymous","N13V G86L Y119T C158Y",4
"lib2","SARS-CoV-2","GTGGCCATATTTTCTG",4,62.76,6.12,-4.71,0.43,1.5,1.15,0,">1 nonsynonymous","A18S A81R A89K",3
"lib2","SARS-CoV-2","GTGGCCATCATACATG",6,0.07,NA,NA,NA,NA,NA,NA,"stop","V32S L38F D97W P133W T170*",5
"lib2","SARS-CoV-2","GTGGCCATGGCAAGAG",1,14.91,7.2,-3.63,0.48,1.5,1,0.07,">1 nonsynonymous","G51L K94N G116T",3
"lib2","SARS-CoV-2","GTGGCCCATCCCGTTG",1,11.07,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G9I A14D D90P E154I",4
"lib2","SARS-CoV-2","GTGGCCCCATAGATGC",5,26.7,10.85,0.01,0.03,2.99,1.03,0,"1 nonsynonymous","S36M",1
"lib2","SARS-CoV-2","GTGGCCCTGTATGCTT",4,16.08,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G86K L131P S139F",3
"lib2","SARS-CoV-2","GTGGCCCTGTCCCAAC",3,2.65,NA,NA,NA,NA,NA,NA,"stop","F12C S36P L60*",3
"lib2","SARS-CoV-2","GTGGCCGAATGACTTG",3,27.6,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A18F S43I K94N N107V",4
"lib2","SARS-CoV-2","GTGGCCGTAATTGTAT",18,201.02,10.66,-0.18,0.03,2.93,1.07,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","GTGGCCTATCTATATG",7,43.52,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","T3E K26I N64R N107I",4
"lib2","SARS-CoV-2","GTGGCGCAGTTTCTGG",2,32.6,10.01,-0.82,0.06,2.72,1.01,0,">1 nonsynonymous","I80L N151T",2
"lib2","SARS-CoV-2","GTGGCGCTTGACTAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","K114A P149L Y178* T201L",4
"lib2","SARS-CoV-2","GTGGCGGACACATAAA",1,83.05,9.9,-0.94,0.05,2.77,1.08,0,">1 nonsynonymous","E10L C61L E154N",3
"lib2","SARS-CoV-2","GTGGCTAAGTAACTGA",1,10.36,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G86S L122H R136S",3
"lib2","SARS-CoV-2","GTGGCTAATACTCAGG",4,138.47,10.85,0.01,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGCTATGTGAGTAC",8,3.34,NA,NA,NA,NA,NA,NA,"stop","V37W P54*",2
"lib2","SARS-CoV-2","GTGGCTCCCATGAAAT",2,23.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I28R D34I P54W",3
"lib2","SARS-CoV-2","GTGGCTCCGATAGTAA",7,17.4,6,-4.84,1.01,3,1.22,0.01,">1 nonsynonymous","E10L D34L G86R P149S",4
"lib2","SARS-CoV-2","GTGGCTCTGAAAACTA",4,51.43,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","Q84L N120S D137N F156M",4
"lib2","SARS-CoV-2","GTGGCTGGTAAAAAAA",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41G C61G Y123L T140V",4
"lib2","SARS-CoV-2","GTGGCTGTAGCCCTTG",9,1.41,NA,NA,NA,NA,NA,NA,"stop","P7S Q84L I104*",3
"lib2","SARS-CoV-2","GTGGCTTATGAGTATT",8,76.14,9.11,-1.73,0.08,2,1.08,0,">1 nonsynonymous","T3W S69M G116D K128Q",4
"lib2","SARS-CoV-2","GTGGCTTGAAAATCAC",9,24.62,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N120A L162R L183Q",3
"lib2","SARS-CoV-2","GTGGGAAACACAGCGA",2,7.71,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F12C C31R G86D Q144R",4
"lib2","SARS-CoV-2","GTGGGAACACCCCGGA",9,115.89,9.21,-1.63,0.07,1.78,1.13,0,">1 nonsynonymous","K48F D59C L122N T201V",4
"lib2","SARS-CoV-2","GTGGGAATAAGTAATA",4,2.74,NA,NA,NA,NA,NA,NA,"stop","P7V I104* P161R",3
"lib2","SARS-CoV-2","GTGGGAATAGAAGCTT",2,47.4,10.23,-0.61,0.05,2.84,1.04,0,">1 nonsynonymous","A14V A190V",2
"lib2","SARS-CoV-2","GTGGGAATGAGCACAA",9,140.98,10.06,-0.77,0.06,2.66,1.01,0,"1 nonsynonymous","R25S",1
"lib2","SARS-CoV-2","GTGGGACATGCACTAA",6,135.21,10.79,-0.04,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGGACGCAAAGATG",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41N K56R A67P R127N D137H",5
"lib2","SARS-CoV-2","GTGGGACTCGCGGGAC",5,35.85,6.19,-4.64,0.51,1.5,1.17,0.01,"1 nonsynonymous","I88R",1
"lib2","SARS-CoV-2","GTGGGAGCAGATAAGT",2,27.43,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","R25D C150D",2
"lib2","SARS-CoV-2","GTGGGAGCAGGTTGCT",5,9.69,6,-4.84,2,3,1.23,0.03,">1 nonsynonymous","A81M T85W K114L I138W F167P",5
"lib2","SARS-CoV-2","GTGGGATCGCACACAG",2,111.26,10.82,-0.01,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGGGATCTTAAATAC",6,48.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","E10L S53K T63E A81S F126I Q144V",6
"lib2","SARS-CoV-2","GTGGGATTAAGACCCG",1,43.24,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S41G C150Y",2
"lib2","SARS-CoV-2","GTGGGATTCTAAATCA",5,67.61,8.61,-2.23,0.13,2.85,1.04,0.01,">1 nonsynonymous","N118Q N157S",2
"lib2","SARS-CoV-2","GTGGGCAATTACACTG",5,0.43,NA,NA,NA,NA,NA,NA,"stop","D97* T201N",2
"lib2","SARS-CoV-2","GTGGGCAGGCCACCGG",1,12.9,10.28,-0.56,0.11,2.74,1,0.01,">1 nonsynonymous","T15N V52T",2
"lib2","SARS-CoV-2","GTGGGCATTGGGAATT",1,54.5,10.75,-0.09,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGGCCAAATAGACA",4,141.48,8.64,-2.2,0.07,3,1.06,0,">1 nonsynonymous","C61Q K87G D98N G146T",4
"lib2","SARS-CoV-2","GTGGGCCATATATGCA",3,38.42,9.92,-0.92,0.1,2.79,1.08,0,">1 nonsynonymous","T140I G152V F156P",3
"lib2","SARS-CoV-2","GTGGGCCGCAATGAGG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96E I142M C150N",3
"lib2","SARS-CoV-2","GTGGGCTACACAAATA",14,311.84,10.17,-0.67,0.02,2.85,1.03,0,">1 nonsynonymous","R27D K56F V173Q T201C",4
"lib2","SARS-CoV-2","GTGGGCTCCAAATCAA",13,45.6,9.05,-1.79,0.28,1.54,1.14,0.03,">1 nonsynonymous","V32I S45H P96I",3
"lib2","SARS-CoV-2","GTGGGCTGGCAGAATC",5,73.92,8.33,-2.51,0.15,1.91,1.04,0.01,">1 nonsynonymous","S41P S113K",2
"lib2","SARS-CoV-2","GTGGGGAAATAGAACA",10,201.26,10.8,-0.04,0.04,2.91,1.1,0,">1 nonsynonymous","S53E N64F",2
"lib2","SARS-CoV-2","GTGGGGAGTCTATTTT",1,11.92,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","C6Y A22V K94I A105C Y119K F134S",6
"lib2","SARS-CoV-2","GTGGGGATAGCATAAA",3,68.3,10.02,-0.82,0.09,2.7,1.06,0,">1 nonsynonymous","Y35C D98E",2
"lib2","SARS-CoV-2","GTGGGGCCCTTGGGGA",10,63.44,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C61W D97A C158Y",3
"lib2","SARS-CoV-2","GTGGGGGAGTCTTACC",3,0,NA,NA,NA,NA,NA,NA,"stop","C31N G86*",2
"lib2","SARS-CoV-2","GTGGGGGCAAGCTTTC",2,14.48,10.85,0.02,0.04,3,1.02,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","GTGGGGTAACGTCAAT",12,34.35,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y91V R124S",2
"lib2","SARS-CoV-2","GTGGGTAAAATATCGA",2,7.46,NA,NA,NA,NA,NA,NA,"stop","S41*",1
"lib2","SARS-CoV-2","GTGGGTAATTTAGCCA",14,157.39,10.12,-0.72,0.05,2.68,1.03,0,">1 nonsynonymous","E10P D90L K199P",3
"lib2","SARS-CoV-2","GTGGGTACTGGTTGAC",2,63.41,10.74,-0.1,0.05,2.92,1.11,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","GTGGGTAGGGCTGCAA",1,43.09,8.43,-2.4,0.1,2.42,1.16,0,">1 nonsynonymous","F44P P149Y T170K",3
"lib2","SARS-CoV-2","GTGGGTTCTCAGGATG",3,26.9,6,-4.84,2,3,1.05,0,">1 nonsynonymous","T55P E135M N157I",3
"lib2","SARS-CoV-2","GTGGGTTGATTGTAAC",2,6.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S Y66S",2
"lib2","SARS-CoV-2","GTGGTAAAAATCCTTT",6,78.19,6.3,-4.54,0.47,1.5,1.17,0.01,">1 nonsynonymous","F8G Y91C V181I",3
"lib2","SARS-CoV-2","GTGGTAAAATGTTTTT",3,47.67,10.8,-0.04,0.09,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGTAAATAAAAACG",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87R F167Y",2
"lib2","SARS-CoV-2","GTGGTAAATGGTAATT",15,186.64,9.94,-0.89,0.05,2.39,1,0,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","GTGGTAACATTTCGAG",2,45.18,9.03,-1.81,0.21,1.97,1.13,0.02,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","GTGGTAACCTAGAATT",9,158.37,10.85,0.01,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGTAACTAGTCATA",5,12.32,6.66,-4.18,0.15,2.41,1.07,0,">1 nonsynonymous","N1S S19E Q84H Y123S",4
"lib2","SARS-CoV-2","GTGGTAAGTGGTACGT",3,10.83,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","D112M P149R T170S E186P",4
"lib2","SARS-CoV-2","GTGGTAATTCAAACTG",10,266.45,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20C N64I Q176P",3
"lib2","SARS-CoV-2","GTGGTACAAACACAGC",16,65.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G83D S113F T140Y N151Y",4
"lib2","SARS-CoV-2","GTGGTACCCGCGAAAA",4,60.26,10.88,0.04,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGTACTTACGTATA",7,57.15,8.54,-2.29,0.2,1.5,1.06,0.01,">1 nonsynonymous","P7T S53F V77L Q144L",4
"lib2","SARS-CoV-2","GTGGTAGACGATACGT",14,235.89,10.59,-0.24,0.04,2.92,1.05,0,">1 nonsynonymous","Y121H G152N",2
"lib2","SARS-CoV-2","GTGGTAGCCAGTCAGC",12,81.02,8.26,-2.58,0.11,2.21,1.13,0,">1 nonsynonymous","G83S I142S P149L",3
"lib2","SARS-CoV-2","GTGGTATAAACTCCCC",7,29.03,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W106S G152L F167S K199T",4
"lib2","SARS-CoV-2","GTGGTATACTAAAAAG",2,12.23,10.77,-0.07,0.08,2.88,1.14,0,"1 nonsynonymous","H189K",1
"lib2","SARS-CoV-2","GTGGTATTGTGACTTC",1,26.08,10.94,0.1,0.06,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGGTCAAACCCCACC",3,13.46,8.93,-1.91,0.13,2.84,1.1,0.01,">1 nonsynonymous","F44L N118H",2
"lib2","SARS-CoV-2","GTGGTCAAGTGAGAAT",11,2.4,NA,NA,NA,NA,NA,NA,"stop","V32A G51* P82V Y91G I104W F126M F160Q T170V",8
"lib2","SARS-CoV-2","GTGGTCACCACCCTAA",2,9.54,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F17L D97I N118R G146Y",4
"lib2","SARS-CoV-2","GTGGTCAGATTAATCT",9,75.23,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R25S K48L Y91G F99Y Y119H",5
"lib2","SARS-CoV-2","GTGGTCAGCCGAGAGC",2,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59M V77Y F134Q",3
"lib2","SARS-CoV-2","GTGGTCATACCGCCAA",14,215.86,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A14M V37S F44N V103H K114E C150R P177L S184M",8
"lib2","SARS-CoV-2","GTGGTCATGAGACGAA",3,19.92,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","A42W G86L A105G",3
"lib2","SARS-CoV-2","GTGGTCCAAATCCCTG",4,21.07,9.65,-1.18,0.11,2.03,1.1,0.01,">1 nonsynonymous","V20A Y35S A190D",3
"lib2","SARS-CoV-2","GTGGTCCAATATCAAA",1,27.08,10.65,-0.19,0.12,2.86,1.09,0.01,">1 nonsynonymous","L60H S129K",2
"lib2","SARS-CoV-2","GTGGTCCAGTATGGCG",7,0.72,NA,NA,NA,NA,NA,NA,"stop","L5V S53* S113* N120R",4
"lib2","SARS-CoV-2","GTGGTCCTATTTTAAG",14,322.65,9.93,-0.9,0.05,2.79,1.03,0,">1 nonsynonymous","D98I K114L Y175F",3
"lib2","SARS-CoV-2","GTGGTCGCCCGCTCTT",8,50.76,10.39,-0.45,0.13,2.7,1.32,0.01,"1 nonsynonymous","N130W",1
"lib2","SARS-CoV-2","GTGGTCTAAAATGGAG",3,54.49,10.77,-0.07,0.06,2.86,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGTGAAAATAAATG",8,81.34,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","S41R N120R E135S L162F V173C",5
"lib2","SARS-CoV-2","GTGGTGAATTTTACAA",4,28.3,10.52,-0.32,0.06,2.99,1.05,0,">1 nonsynonymous","E10G V65L",2
"lib2","SARS-CoV-2","GTGGTGACCACATAGG",16,177.79,10.77,-0.07,0.04,2.91,1.1,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","GTGGTGATAAATCACA",6,193.76,9.97,-0.86,0.06,2.36,1.03,0,">1 nonsynonymous","R136E S200H",2
"lib2","SARS-CoV-2","GTGGTGATATCGCGAC",6,130.98,10.85,0.01,0.04,2.94,1.08,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","GTGGTGATGAATATAT",3,37.12,8.07,-2.77,0.23,1.5,1.03,0.02,">1 nonsynonymous","V37I K94E T148Q",3
"lib2","SARS-CoV-2","GTGGTGGCTTGGTGTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","GTGGTGGTGCTTGCAT",12,109.48,10.61,-0.22,0.05,2.93,1.05,0,">1 nonsynonymous","I2E Y66L G83Y",3
"lib2","SARS-CoV-2","GTGGTGGTGTAAGAAA",3,21.33,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C49S R73M L131I",3
"lib2","SARS-CoV-2","GTGGTGTAATGCAAAG",6,66.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V T46H D68F G86R S129V",5
"lib2","SARS-CoV-2","GTGGTGTACACCAGTA",3,43.69,9.61,-1.23,0.08,2.33,1.15,0,">1 nonsynonymous","S43F F134G Q144L",3
"lib2","SARS-CoV-2","GTGGTGTGGTCTGCAA",1,9.28,9.54,-1.3,0.32,1.85,1.12,0.02,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","GTGGTTAAAAAGCGCA",5,13.55,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V37Y N64Y A105N P161N P177T",5
"lib2","SARS-CoV-2","GTGGTTAAAGAGGCAA",5,92.97,10.64,-0.2,0.06,2.89,1.04,0,">1 nonsynonymous","N4R I138F",2
"lib2","SARS-CoV-2","GTGGTTACCCATTAGG",5,30.1,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2M C31M R179G",3
"lib2","SARS-CoV-2","GTGGTTAGCTCGACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Y F70E",2
"lib2","SARS-CoV-2","GTGGTTCAAAAACACG",4,2.43,NA,NA,NA,NA,NA,NA,"stop","V37Y L60V Y119L K198*",4
"lib2","SARS-CoV-2","GTGGTTCCATATACAG",2,19.92,6,-4.84,1.34,3,1.1,0.01,">1 nonsynonymous","G83W A89R E141F N151F T201Y",5
"lib2","SARS-CoV-2","GTGGTTCCTGGGAACT",3,34.49,8.48,-2.36,0.28,1.5,1,0.03,">1 nonsynonymous","G9I T15V L122C R136M N171T G174A",6
"lib2","SARS-CoV-2","GTGGTTGAAGGATGAA",1,17.25,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N107R R136E",2
"lib2","SARS-CoV-2","GTGGTTGAGGATTAGT",1,6.64,8.66,-2.18,0.27,2.3,1.02,0.03,">1 nonsynonymous","N4Y V37G D90F T170M",4
"lib2","SARS-CoV-2","GTGGTTGTGAAATGTC",2,36.23,10.79,-0.05,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGGTTTAAGAATACT",2,42.81,9.61,-1.23,0.04,2.93,1.04,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","GTGGTTTTCACAGCTA",7,60.14,8.94,-1.9,0.07,2.72,1.11,0,">1 nonsynonymous","N30E T100I G146R",3
"lib2","SARS-CoV-2","GTGTAAAAAAACACCG",3,30.51,10.71,-0.12,0.04,3,1.01,0,"1 nonsynonymous","N40L",1
"lib2","SARS-CoV-2","GTGTAAAAATTATTGA",3,21.01,10.73,-0.11,0.04,2.98,1,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","GTGTAAAACACGAGTA",1,5.09,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","S43D V77P F99L P133S E141Q",5
"lib2","SARS-CoV-2","GTGTAAAACTAGCATA",16,85.5,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y93E F156Y",2
"lib2","SARS-CoV-2","GTGTAAAATAGAAGGT",2,78.11,8.49,-2.35,0.09,2.73,1.08,0,">1 nonsynonymous","G9N D98S Y143S S200L",4
"lib2","SARS-CoV-2","GTGTAAAATCCCTGTA",4,52.09,10.82,-0.02,0.05,2.96,1.03,0,">1 nonsynonymous","A33F F44Y",2
"lib2","SARS-CoV-2","GTGTAAACACAAGCGA",2,16.1,10.67,-0.17,0.1,2.93,1.09,0,">1 nonsynonymous","D97Q N110L S200Q",3
"lib2","SARS-CoV-2","GTGTAAACCAATTCCC",5,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S N13Y V71K G174E",4
"lib2","SARS-CoV-2","GTGTAAACCCACACCA",2,33.94,10.76,-0.08,0.04,2.95,1.06,0,"1 nonsynonymous","T193I",1
"lib2","SARS-CoV-2","GTGTAAAGCTCACCTT",4,45.73,9.19,-1.65,0.06,2.84,1.09,0,">1 nonsynonymous","N64W Y119S S129A",3
"lib2","SARS-CoV-2","GTGTAAAGTAAGAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37I N58* T201S",3
"lib2","SARS-CoV-2","GTGTAAATTCGCTGCC",10,150.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6I S29P Y35M W106R L131P V173K S200V",7
"lib2","SARS-CoV-2","GTGTAAATTTCAATAA",1,21.78,11,0.16,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGTAACCAATGTATT",1,7.3,10.8,-0.03,0.16,2.8,1.2,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTGTAACGCGCTACGG",6,51.2,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N58P G101F",2
"lib2","SARS-CoV-2","GTGTAACGTAAATGGA",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L T85K G101P F160A",4
"lib2","SARS-CoV-2","GTGTAACTACGACACT",1,26.35,10.63,-0.2,0.08,2.85,1.16,0,">1 nonsynonymous","V37K F160T P197Q",3
"lib2","SARS-CoV-2","GTGTAAGTTAAACGAA",2,40.1,10.81,-0.02,0.06,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGTAATCCACTAACG",7,54.9,10.75,-0.08,0.09,2.89,1.09,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","GTGTAATCGAATTGGG",7,23.84,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","P7L D59T L95I D112C E186I T201M",6
"lib2","SARS-CoV-2","GTGTAATGACGTATTT",6,54.04,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","W106N A145L",2
"lib2","SARS-CoV-2","GTGTAATGAGATTTGA",5,38.75,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I28L C49H R136C",3
"lib2","SARS-CoV-2","GTGTAATGGGATGGTT",2,38.73,10.46,-0.37,0.04,2.84,1.1,0,">1 nonsynonymous","N58P D98L",2
"lib2","SARS-CoV-2","GTGTACAAGACTTTAT",4,37.4,10.93,0.09,0.05,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGTACAATACCTTAA",2,20.71,10.69,-0.14,0.06,2.97,1.05,0,">1 nonsynonymous","G9R S43V",2
"lib2","SARS-CoV-2","GTGTACAATGTAGCGT",10,121.68,9,-1.83,0.1,1.5,1.14,0,">1 nonsynonymous","L60A R127H P149R K199Q",4
"lib2","SARS-CoV-2","GTGTACAGGAAAAAAA",7,3.07,NA,NA,NA,NA,NA,NA,"stop","C61R V77* T85P C195M",4
"lib2","SARS-CoV-2","GTGTACAGGATTTGAT",3,20.96,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","C6V V37G I72D E141V",4
"lib2","SARS-CoV-2","GTGTACCCGACGTTGT",3,100.63,8.75,-2.09,0.16,1.5,1.03,0.01,">1 nonsynonymous","A14P V37R L60F G155E T201E",5
"lib2","SARS-CoV-2","GTGTACCGAACACTTA",10,0.58,NA,NA,NA,NA,NA,NA,"stop","L5Q T100Y R136* I142W",4
"lib2","SARS-CoV-2","GTGTACCGTCCAGATA",3,0.74,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","GTGTACGAATAGGATA",3,56.52,9.82,-1.01,0.09,2.51,1.02,0,"1 nonsynonymous","V11P",1
"lib2","SARS-CoV-2","GTGTACGCCCTAAATT",9,191.74,10.77,-0.07,0.05,2.94,1.09,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","GTGTACGCGTCCGAAT",3,36,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y93T E154N F167N",3
"lib2","SARS-CoV-2","GTGTACGTAGAACTTA",2,44.53,10.88,0.04,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGTACGTAGATAAAA",2,21.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I2P F12P C31F A145D",4
"lib2","SARS-CoV-2","GTGTACTCCGATGCAA",10,119.17,9.08,-1.76,0.08,2.56,1.08,0,">1 nonsynonymous","T3R N64R G146R",3
"lib2","SARS-CoV-2","GTGTACTGGATTCCGG",10,254.94,10.18,-0.65,0.03,2.85,1.05,0,">1 nonsynonymous","A67T V115E",2
"lib2","SARS-CoV-2","GTGTAGCTTGGGTTCC",5,112.31,10.81,-0.03,0.05,2.92,1.09,0,"1 nonsynonymous","N4G",1
"lib2","SARS-CoV-2","GTGTATAACCTCCCGG",8,111.92,10,-0.84,0.07,2.04,1.06,0,">1 nonsynonymous","N40A V52K",2
"lib2","SARS-CoV-2","GTGTATAATACTCAAT",2,50.33,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G51R D59W R73T P82C N120V Y175V",6
"lib2","SARS-CoV-2","GTGTATATTCTTGGAA",7,45.03,10.83,-0.01,0.07,2.94,1.06,0,"1 nonsynonymous","N40H",1
"lib2","SARS-CoV-2","GTGTATCATAAAAAAA",2,29.45,10.77,-0.07,0.08,2.9,1.13,0,"1 nonsynonymous","G196S",1
"lib2","SARS-CoV-2","GTGTATCCAAGTCGCA",3,60.07,10.7,-0.14,0.04,2.89,1.07,0,">1 nonsynonymous","E10T A22K R27K",3
"lib2","SARS-CoV-2","GTGTATCCTCCAACCT",6,145.42,7.26,-3.57,0.1,1.64,1.08,0,">1 nonsynonymous","K87N S147Y T170I",3
"lib2","SARS-CoV-2","GTGTATCTGTCTCGGT",4,44.98,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D68R K87T",2
"lib2","SARS-CoV-2","GTGTATGGAGCTGTCC",2,58.05,8.68,-2.16,0.08,3,1.08,0,">1 nonsynonymous","P7D Y159Q G196E",3
"lib2","SARS-CoV-2","GTGTATGTATACGGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","V32* R73T Y91R",3
"lib2","SARS-CoV-2","GTGTATGTCATCAGAT",2,26.39,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I80R P161T",2
"lib2","SARS-CoV-2","GTGTATTCAAGGAAAA",6,38.39,9.05,-1.79,0.15,1.66,1.05,0.01,">1 nonsynonymous","F8R E141A",2
"lib2","SARS-CoV-2","GTGTATTTAAGGTGTA",2,7.73,6,-4.84,2,1.5,1,0,">1 nonsynonymous","C61I D68F N151W Y165T",4
"lib2","SARS-CoV-2","GTGTATTTTATGAGTA",2,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113K N157G C195F",3
"lib2","SARS-CoV-2","GTGTCAAAACACCCAA",11,133.74,10.25,-0.58,0.03,2.83,1.04,0,">1 nonsynonymous","T15E D90T",2
"lib2","SARS-CoV-2","GTGTCAAAACCTTTAG",7,0.22,NA,NA,NA,NA,NA,NA,"stop","G9* S29E T55D K128Y F160T V182M",6
"lib2","SARS-CoV-2","GTGTCAAAACTATCGT",3,183.11,9.71,-1.12,0.04,2.71,1.04,0,">1 nonsynonymous","A22K N118Y S129R",3
"lib2","SARS-CoV-2","GTGTCAAAGAACACAG",10,265.18,10.82,-0.02,0.04,2.97,1.06,0,"1 nonsynonymous","L187D",1
"lib2","SARS-CoV-2","GTGTCAACCAAAATTG",3,38.54,9.04,-1.8,0.12,2,1.01,0.01,">1 nonsynonymous","D90E N107G E154L",3
"lib2","SARS-CoV-2","GTGTCAAGAAAAAGCT",6,207.02,10.72,-0.11,0.02,2.95,1.03,0,">1 nonsynonymous","F44G Y123F",2
"lib2","SARS-CoV-2","GTGTCAATCAATCACT",2,30.93,6.52,-4.31,0.65,1.5,1.15,0.05,">1 nonsynonymous","S43E V103M E135P",3
"lib2","SARS-CoV-2","GTGTCAATCGGCATAG",1,5.04,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","F12A P96T R136M I142W",4
"lib2","SARS-CoV-2","GTGTCACATATTAAGC",2,21.12,9.94,-0.9,0.11,2.51,1.03,0.01,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","GTGTCACCATAAAATA",1,51.4,8.76,-2.08,0.1,2.95,1.03,0,">1 nonsynonymous","N110T I142D",2
"lib2","SARS-CoV-2","GTGTCACCGACAGACC",2,22.22,9.01,-1.82,0.27,2.24,1.13,0.03,">1 nonsynonymous","N107L E141R",2
"lib2","SARS-CoV-2","GTGTCACGTTATCCGT",4,85.7,10.79,-0.04,0.04,2.95,1.07,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","GTGTCACTGATTCAGT",5,101.64,10.19,-0.64,0.06,2.76,1.05,0,">1 nonsynonymous","I2N T46N L60G",3
"lib2","SARS-CoV-2","GTGTCAGAGCAAATAT",24,347.65,10.87,0.04,0.03,2.94,1.07,0,"1 nonsynonymous","G9D",1
"lib2","SARS-CoV-2","GTGTCAGCTAAAGGAA",9,15.2,9.35,-1.49,0.2,1.67,1.14,0.02,">1 nonsynonymous","A33M L131S",2
"lib2","SARS-CoV-2","GTGTCAGTGAACCCCG",1,27.9,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F62A G83Y R124S",3
"lib2","SARS-CoV-2","GTGTCATGATCTACAC",5,72.67,6.25,-4.59,0.64,1.5,1.2,0.02,">1 nonsynonymous","G9T R127L G152Y",3
"lib2","SARS-CoV-2","GTGTCATTAAATAACG",19,286.5,9.25,-1.59,0.07,2.28,1.07,0,">1 nonsynonymous","Y121L F134I",2
"lib2","SARS-CoV-2","GTGTCATTTGAAAAAT",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104V L131A P161S T201S",4
"lib2","SARS-CoV-2","GTGTCCACATGACGGA",16,2.23,NA,NA,NA,NA,NA,NA,"stop","N1S N13T D90L A105* N120P E141H",6
"lib2","SARS-CoV-2","GTGTCCACTTTGGCTA",12,94.44,8.24,-2.6,0.11,2,1.07,0,">1 nonsynonymous","T3R P7L F44I K87T F160Y Q168C",6
"lib2","SARS-CoV-2","GTGTCCAGAAGATACA",12,6.41,NA,NA,NA,NA,NA,NA,"stop","K56T L95* F134T",3
"lib2","SARS-CoV-2","GTGTCCCAATTACATT",1,16.42,6.14,-4.69,0.41,2.39,1.1,0.01,">1 nonsynonymous","G9L L38S V65L R73L Y143F S184L",6
"lib2","SARS-CoV-2","GTGTCCCCACACCTAC",5,12.76,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K87I L95R E135P T148N F185Y",5
"lib2","SARS-CoV-2","GTGTCCGTTAAAAGAC",3,56.33,6.28,-4.56,0.75,1.5,1.24,0.03,">1 nonsynonymous","L60K G101W L125I V173T",4
"lib2","SARS-CoV-2","GTGTCCTCATCGATAG",5,70.95,8.41,-2.43,0.12,2.85,1.09,0,">1 nonsynonymous","G117L F156S",2
"lib2","SARS-CoV-2","GTGTCCTCGGCTTACG",8,68.5,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","R16I S41F T46N V65N K87G",5
"lib2","SARS-CoV-2","GTGTCGAAAAGAATCT",6,129.7,10.19,-0.65,0.04,2.9,1.05,0,">1 nonsynonymous","L38M Q144T",2
"lib2","SARS-CoV-2","GTGTCGAACGCCATGG",9,96.76,6.15,-4.69,0.76,1.5,1.15,0.02,">1 nonsynonymous","G146F G152N N157T",3
"lib2","SARS-CoV-2","GTGTCGAACTAAGTAC",9,108.66,10.27,-0.57,0.05,2.76,1.06,0,">1 nonsynonymous","D98W P149M",2
"lib2","SARS-CoV-2","GTGTCGACTAAAGTTA",1,16.17,6.51,-4.33,0.49,1.5,1.02,0.05,">1 nonsynonymous","N120A F134L G146P",3
"lib2","SARS-CoV-2","GTGTCGCTTAGCCTTT",16,165.34,8.83,-2.01,0.11,1.5,1.1,0.01,">1 nonsynonymous","Q79K S139Y T201D",3
"lib2","SARS-CoV-2","GTGTCGGATTCCCACA",2,58.5,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50L Y119L",2
"lib2","SARS-CoV-2","GTGTCGGATTTACTCT",5,2.44,NA,NA,NA,NA,NA,NA,"stop","Y91* D97G",2
"lib2","SARS-CoV-2","GTGTCTAAAAGTAAAA",1,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F R73C",2
"lib2","SARS-CoV-2","GTGTCTAATAACCTGT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F V77E L95R C195L",4
"lib2","SARS-CoV-2","GTGTCTAGTGCGCCTT",7,36.4,9.49,-1.34,0.11,2.14,1.03,0,">1 nonsynonymous","F12R A33C K87Y",3
"lib2","SARS-CoV-2","GTGTCTATAACCAACG",1,11.58,10.84,0.01,0.08,2.93,1.03,0,">1 nonsynonymous","G155K P197V",2
"lib2","SARS-CoV-2","GTGTCTATACAACCCC",9,182.82,10.5,-0.34,0.04,2.91,1.05,0,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","GTGTCTCCACTACTGC",4,44.73,6,-4.84,2,2.91,1.18,0,">1 nonsynonymous","F17D P96R",2
"lib2","SARS-CoV-2","GTGTCTCGAAGAATAA",8,89.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R73P T85E Y119N R136A S164K",5
"lib2","SARS-CoV-2","GTGTCTCTGTCTCAGA",3,32.68,10.72,-0.12,0.09,2.94,1.07,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","GTGTCTGATACACGCC",2,1.87,NA,NA,NA,NA,NA,NA,"stop","V11F S53* W106V",3
"lib2","SARS-CoV-2","GTGTCTGGAAAATCAT",7,80.05,10.81,-0.02,0.05,2.87,1.15,0,">1 nonsynonymous","L5T T100I",2
"lib2","SARS-CoV-2","GTGTCTGGACAGTAAA",3,39.75,6.07,-4.77,1.13,1.5,1.13,0.03,">1 nonsynonymous","N30L K94S E135L G172I G196R T201V",6
"lib2","SARS-CoV-2","GTGTCTGTCTGTGATC",1,3.58,NA,NA,NA,NA,NA,NA,"stop","G116* R124L P133T",3
"lib2","SARS-CoV-2","GTGTCTTATATGGAAA",5,55.81,8.24,-2.59,0.24,2.8,1.2,0.02,">1 nonsynonymous","V32E Y175Q",2
"lib2","SARS-CoV-2","GTGTCTTTTCCTCAAA",4,56.28,9.34,-1.5,0.07,1.94,1.04,0,">1 nonsynonymous","L122P T201N",2
"lib2","SARS-CoV-2","GTGTGAACATCATACA",5,42.28,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K94L Y159S",2
"lib2","SARS-CoV-2","GTGTGAAGAAACCAAA",5,213.46,8.82,-2.01,0.08,2.3,1.05,0,">1 nonsynonymous","T85W G146Q",2
"lib2","SARS-CoV-2","GTGTGACAATGTCTAG",2,82.74,10.36,-0.48,0.05,2.85,1.12,0,">1 nonsynonymous","N1M K87N",2
"lib2","SARS-CoV-2","GTGTGACGAAAAACGA",7,111.02,10.85,0.01,0.05,3,1.03,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","GTGTGAGCATTAGTTA",1,0.3,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTGTGAGTTATTTAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S129G",1
"lib2","SARS-CoV-2","GTGTGATATACTAGAA",11,50.88,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V20S N64P A145F",3
"lib2","SARS-CoV-2","GTGTGCATCAGGACTG",4,51.53,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I28T L38T A89S",3
"lib2","SARS-CoV-2","GTGTGCCAATAGAGAA",5,73.55,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99L A105F E141R P161A",4
"lib2","SARS-CoV-2","GTGTGCGAATATAATA",8,67.53,8.95,-1.89,0.16,1.5,1,0.01,">1 nonsynonymous","G83N G86H T201N",3
"lib2","SARS-CoV-2","GTGTGCGAGAGTAATT",3,39.87,6,-4.84,1.18,3,1.16,0,">1 nonsynonymous","I72L F167I",2
"lib2","SARS-CoV-2","GTGTGCTCCCTAGCAC",1,4.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86L W106C Q168F",3
"lib2","SARS-CoV-2","GTGTGCTGCTTCAGCA",6,41.68,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","P82S G172K",2
"lib2","SARS-CoV-2","GTGTGCTTATTCGACA",2,28.76,6.38,-4.45,0.51,1.5,1.18,0.03,">1 nonsynonymous","V77Y K87S K199E",3
"lib2","SARS-CoV-2","GTGTGGAGATGTGAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T15K",1
"lib2","SARS-CoV-2","GTGTGGCCACCAACGA",7,2.63,NA,NA,NA,NA,NA,NA,"stop","S45H Y165L T201*",3
"lib2","SARS-CoV-2","GTGTGTAAGCCATCTT",1,22.09,6.05,-4.79,1,1.5,1.14,0.04,">1 nonsynonymous","R25T N92A K114C G117V L122A G155N",6
"lib2","SARS-CoV-2","GTGTGTACCAGGCCTT",5,40.26,9.04,-1.79,0.1,2.5,1.03,0,">1 nonsynonymous","N1S L38Y Q168G",3
"lib2","SARS-CoV-2","GTGTGTACGCTGATTG",3,41.11,10.74,-0.09,0.06,2.95,1.08,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","GTGTGTATTGAAAAAG",5,23.46,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R127C Y165A",2
"lib2","SARS-CoV-2","GTGTGTCAACAATTAG",9,118.57,8.59,-2.25,0.08,3,1.07,0,">1 nonsynonymous","G146C G152S F156P",3
"lib2","SARS-CoV-2","GTGTGTCAGACTGAAA",1,32.42,11.06,0.23,0.26,2.74,1.05,0.01,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","GTGTGTCGAATTTAGC",2,41.98,10.62,-0.22,0.05,2.96,1.06,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","GTGTGTCGGCTACCAA",6,84.35,10.8,-0.03,0.09,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGTGTCTATATACAG",14,102.74,7.03,-3.81,0.4,1.5,1.2,0.03,">1 nonsynonymous","I28L Y93L C195P",3
"lib2","SARS-CoV-2","GTGTGTCTATTAAAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","C61* N171I",2
"lib2","SARS-CoV-2","GTGTGTTTCAATCTAG",5,33.79,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14D V77H P82I P169H",4
"lib2","SARS-CoV-2","GTGTGTTTGACTAATC",23,171.5,NA,NA,NA,NA,NA,NA,"stop","E76* K94V I104S",3
"lib2","SARS-CoV-2","GTGTTAAAATAAGTAT",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56W D98L G155D",3
"lib2","SARS-CoV-2","GTGTTAAATAAGAATG",2,27.04,10.17,-0.67,0.07,2.78,1.02,0,">1 nonsynonymous","N40V T46M T100L",3
"lib2","SARS-CoV-2","GTGTTAAGATATATTC",14,85.04,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C49K G83A R124N S164V",4
"lib2","SARS-CoV-2","GTGTTAAGCCGCTTAT",6,21.24,10.72,-0.12,0.06,2.91,1.1,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","GTGTTAAGGGGATATA",9,23.64,6.67,-4.16,0.55,1.5,1.22,0.02,">1 nonsynonymous","S45G V103A",2
"lib2","SARS-CoV-2","GTGTTAATAGTTTTCA",14,133.45,6,-4.84,0.66,1.5,1.12,0,">1 nonsynonymous","N64L I142S Y165P",3
"lib2","SARS-CoV-2","GTGTTAATTAATACGG",1,36.73,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R78L E141K Y175P",3
"lib2","SARS-CoV-2","GTGTTACACAAGGATG",2,0.16,NA,NA,NA,NA,NA,NA,"stop","R27* C49* Y119E",3
"lib2","SARS-CoV-2","GTGTTACACCCTAAAC",2,8.85,9.94,-0.89,0.32,2.26,1.04,0.02,">1 nonsynonymous","A81K N120C S200F",3
"lib2","SARS-CoV-2","GTGTTACACGGTCAAG",2,2.52,NA,NA,NA,NA,NA,NA,"stop","A67S I80Y K87Y F99* I104Y S108T G174D T201S",8
"lib2","SARS-CoV-2","GTGTTACTGCAAAATA",1,40.87,7.97,-2.86,0.51,1.5,1.04,0.07,">1 nonsynonymous","P133R Y143R",2
"lib2","SARS-CoV-2","GTGTTAGAAAATTTTC",7,93.75,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N58F N107V P161R G174W",4
"lib2","SARS-CoV-2","GTGTTAGAATGCAGTC",18,211.16,10.35,-0.48,0.03,2.9,1.06,0,">1 nonsynonymous","A42T D97C T148Q",3
"lib2","SARS-CoV-2","GTGTTAGCCCAAATAC",5,116.24,9.22,-1.62,0.06,2.9,1.09,0,">1 nonsynonymous","S43V Q168L",2
"lib2","SARS-CoV-2","GTGTTAGCTCCGACAC",1,5.94,11.14,0.31,0.1,3,1.01,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","GTGTTATAGAGCCCAT",3,25.69,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","C61N F99V N107C",3
"lib2","SARS-CoV-2","GTGTTATAGGAATATC",4,71.41,7.22,-3.61,0.28,1.5,1.12,0.02,">1 nonsynonymous","N1Q R16L A22S C31R F134N",5
"lib2","SARS-CoV-2","GTGTTATCATACCGTA",13,265.41,10.84,0,0.05,2.9,1.11,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","GTGTTATGCGTTCCCT",6,16.79,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","R16Y A42F W106L N130H R179W",5
"lib2","SARS-CoV-2","GTGTTATGTAGAAGCT",1,35,10.72,-0.11,0.04,2.92,1.02,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GTGTTATTAAACTGTA",6,36.84,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A22V C61G N120R S139R P149L",5
"lib2","SARS-CoV-2","GTGTTCAAAGCGCTGC",8,43.6,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F134T F167V",2
"lib2","SARS-CoV-2","GTGTTCACAAAAAACA",6,90.73,10.68,-0.16,0.02,2.97,1.03,0,"1 nonsynonymous","V32A",1
"lib2","SARS-CoV-2","GTGTTCCATCAAGTTC",1,25.6,10.86,0.03,0.04,2.97,1.01,0,">1 nonsynonymous","G51N N120K",2
"lib2","SARS-CoV-2","GTGTTCCCCAAACCAT",14,410.71,10.96,0.12,0.04,2.95,1.06,0,"1 nonsynonymous","N130K",1
"lib2","SARS-CoV-2","GTGTTCGAAATTTAAG",5,12.17,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","GTGTTCGGCACTAAAT",1,326.23,9.37,-1.46,0.05,1.73,1.06,0,">1 nonsynonymous","Y50N F134W",2
"lib2","SARS-CoV-2","GTGTTCTAGAGCATAT",4,98.22,9.32,-1.51,0.06,1.9,1.08,0,">1 nonsynonymous","G9M Y50F P133T T201K",4
"lib2","SARS-CoV-2","GTGTTCTGAGCGTGAC",2,2.72,NA,NA,NA,NA,NA,NA,"stop","S45D S69E T85K N107* F167W",5
"lib2","SARS-CoV-2","GTGTTCTGGGGATTCG",2,24.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123P P149S G166A",3
"lib2","SARS-CoV-2","GTGTTCTTACACATTC",7,94.2,10.83,-0.01,0.04,2.93,1.07,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","GTGTTGAAACTCGTGC",5,596.8,6,-4.84,1.93,1.5,1.14,0,">1 nonsynonymous","N4I Y123M S139C Q176N",4
"lib2","SARS-CoV-2","GTGTTGAAAGATATAG",2,53.01,7.44,-3.4,0.23,1.6,1.14,0.01,"1 nonsynonymous","C150E",1
"lib2","SARS-CoV-2","GTGTTGAAATGGCGAG",1,7.31,NA,NA,NA,NA,NA,NA,"stop","T3G D112L F156* P197T",4
"lib2","SARS-CoV-2","GTGTTGACATGCCAGG",3,122.15,7.84,-2.99,0.19,1.5,1.04,0.01,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","GTGTTGAGCTACGAAA",2,25.66,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P82T A105H",2
"lib2","SARS-CoV-2","GTGTTGATGAGGTAAA",1,17.85,9.08,-1.75,0.1,2.7,1.08,0,">1 nonsynonymous","C61F T100V Y119M S184T",4
"lib2","SARS-CoV-2","GTGTTGCGACATCCTG",3,53.61,10.22,-0.62,0.04,2.95,1.02,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","GTGTTGCTGATAATAA",1,0.96,NA,NA,NA,NA,NA,NA,"stop","Q176*",1
"lib2","SARS-CoV-2","GTGTTGGGAGAAAGGC",6,51.15,6,-4.84,1.75,3,1.21,0.01,">1 nonsynonymous","A89R Y93H T148N",3
"lib2","SARS-CoV-2","GTGTTGGTGGACCATG",5,28.17,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44Y K87Y G116S P161H",4
"lib2","SARS-CoV-2","GTGTTGTGTTAAATCT",5,0.06,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","GTGTTGTTATTAAAAT",1,17.58,10.4,-0.44,0.12,2.89,1,0.01,">1 nonsynonymous","F62G L111A",2
"lib2","SARS-CoV-2","GTGTTGTTCAGAGAAC",1,52.86,7.86,-2.97,0.11,1.78,1.08,0,">1 nonsynonymous","T3W V37S C61F I138Y T170D",5
"lib2","SARS-CoV-2","GTGTTTAACAACGCTT",3,26.64,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","V37M G86P V103Q",3
"lib2","SARS-CoV-2","GTGTTTACCATAGTTG",1,12.22,8.78,-2.06,0.27,1.5,1,0.03,">1 nonsynonymous","L95T Y123L",2
"lib2","SARS-CoV-2","GTGTTTACGATGGGCG",2,0.09,NA,NA,NA,NA,NA,NA,"stop","E10S A42G W106V G116*",4
"lib2","SARS-CoV-2","GTGTTTATAAATGAAT",4,211.85,10.82,-0.02,0.04,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","GTGTTTATCTATTGCG",3,39.73,10.82,-0.02,0.06,2.93,1.08,0,"1 nonsynonymous","V194L",1
"lib2","SARS-CoV-2","GTGTTTCCAGTCTAAG",1,16.05,10.69,-0.15,0.07,2.9,1.07,0,">1 nonsynonymous","S41F F62Y",2
"lib2","SARS-CoV-2","GTGTTTCGTACGTTTT",7,0.49,NA,NA,NA,NA,NA,NA,"stop","Q84R D90L L122D T148*",4
"lib2","SARS-CoV-2","GTGTTTCTAAGCTCAT",5,63.07,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","L57P P177K",2
"lib2","SARS-CoV-2","GTGTTTCTCAAAGTGA",2,21.24,10.98,0.14,0.06,2.96,1.04,0,"1 nonsynonymous","V153L",1
"lib2","SARS-CoV-2","GTGTTTCTGCAGAAGT",1,8.25,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","D112Q N118S R127S I142K",4
"lib2","SARS-CoV-2","GTGTTTCTTATAGTAA",3,39.18,9.91,-0.93,0.09,2.65,1.04,0,">1 nonsynonymous","G9I R127K",2
"lib2","SARS-CoV-2","GTGTTTGCCAATTCGC",8,76.78,10.04,-0.79,0.06,2.6,1.13,0,">1 nonsynonymous","N13C L131I",2
"lib2","SARS-CoV-2","GTGTTTGCCAGATCAC",4,25.4,6.97,-3.87,0.37,1.5,1.19,0.03,">1 nonsynonymous","S45L Y123I I138Y P197S",4
"lib2","SARS-CoV-2","GTGTTTGGGAAGTGAA",14,115.55,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N40W D68E Y91H S139I Q168M",5
"lib2","SARS-CoV-2","GTGTTTTACAAAAAAT",6,130.1,10.8,-0.03,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTGTTTTACGAAATCG",10,56.14,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V37N F99K C150T",3
"lib2","SARS-CoV-2","GTGTTTTAGAAAAGGG",6,104.02,10.83,-0.01,0.06,2.95,1.06,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","GTGTTTTAGTACCACG",5,2.62,NA,NA,NA,NA,NA,NA,"stop","T63V G116A G174*",3
"lib2","SARS-CoV-2","GTGTTTTCACAACATA",2,99.22,10.87,0.03,0.04,2.93,1.07,0,">1 nonsynonymous","N110T V173L",2
"lib2","SARS-CoV-2","GTGTTTTGGGATATCT",5,0.17,NA,NA,NA,NA,NA,NA,"stop","G83* A105T N118F G146M",4
"lib2","SARS-CoV-2","GTGTTTTTACGTAACT",6,135.92,10.82,-0.01,0.04,2.91,1.09,0,">1 nonsynonymous","S113A T201I",2
"lib2","SARS-CoV-2","GTGTTTTTCACTTTCT",4,15.15,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A33V Y39F F47H D68V Y123L L131M S147A",7
"lib2","SARS-CoV-2","GTGTTTTTGAGGCCGA",1,8.25,10.87,0.04,0.07,3,1,0,">1 nonsynonymous","S53Y A190N T201S",3
"lib2","SARS-CoV-2","GTTAAAAAACTTGAAC",12,83.05,10.57,-0.27,0.04,2.9,1.09,0,">1 nonsynonymous","Y66T R78E K132M",3
"lib2","SARS-CoV-2","GTTAAAAAAGAGGTAA",18,143.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12A L38C Y50F I88L R124S",5
"lib2","SARS-CoV-2","GTTAAAAAATTTAGAA",11,181.43,10.76,-0.07,0.06,2.93,1.09,0,">1 nonsynonymous","F99W T201L",2
"lib2","SARS-CoV-2","GTTAAAAAGGCGAGAC",2,13.32,6.18,-4.65,0.66,1.5,1.11,0.01,">1 nonsynonymous","G9L Y165R V182L",3
"lib2","SARS-CoV-2","GTTAAAAATACAATAA",2,14.75,6,-4.84,2,1.5,1.17,0.03,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","GTTAAAAATCCGACGC",4,97.16,10.21,-0.63,0.05,2.81,1.09,0,">1 nonsynonymous","F12L N130V I138S",3
"lib2","SARS-CoV-2","GTTAAAAATGTTACAT",4,63.08,9.35,-1.49,0.1,2.03,1.09,0,">1 nonsynonymous","N13Q I142T G155R",3
"lib2","SARS-CoV-2","GTTAAAACAAATTATA",6,24.17,6.01,-4.82,1.2,1.5,1.17,0.03,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","GTTAAAACAACACCGG",4,101.2,8.32,-2.51,0.16,1.87,1.08,0.01,">1 nonsynonymous","R16L N64C S113Y",3
"lib2","SARS-CoV-2","GTTAAAACACTCGATT",2,10.04,NA,NA,NA,NA,NA,0.53,">1 nonsynonymous","D90G V103G",2
"lib2","SARS-CoV-2","GTTAAAACCAAAGTAA",2,9.94,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","C49T D68K D112L N130Q",4
"lib2","SARS-CoV-2","GTTAAAACGCAGAGTA",15,99.57,7.3,-3.54,0.37,1.5,1.18,0.03,">1 nonsynonymous","F8Q G146W",2
"lib2","SARS-CoV-2","GTTAAAACTCCCATTG",3,36.47,10.84,0,0.07,3,1.01,0,">1 nonsynonymous","Y39V L188P",2
"lib2","SARS-CoV-2","GTTAAAACTCCTTTGA",3,45.34,7.89,-2.95,0.37,1.5,1.03,0.05,">1 nonsynonymous","K26R S43T S113K E135R P149L",5
"lib2","SARS-CoV-2","GTTAAAAGAGACTCAG",2,9.32,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","V37A P82T P96D",3
"lib2","SARS-CoV-2","GTTAAAAGTACTGTTA",4,14.63,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D98L D112W",2
"lib2","SARS-CoV-2","GTTAAAAGTTGAAACG",2,21.14,9.78,-1.06,0.09,2.8,1.16,0.01,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","GTTAAAATAATCGGAT",2,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V D34M A81K G146Q",4
"lib2","SARS-CoV-2","GTTAAAATAGCTGATA",1,38.89,8.67,-2.16,0.08,2.87,1.04,0,">1 nonsynonymous","S41P G155P",2
"lib2","SARS-CoV-2","GTTAAAATAGTACTAA",4,53.64,6,-4.84,0.75,1.5,1.08,0,">1 nonsynonymous","P54H A67S Y143I Y175K",4
"lib2","SARS-CoV-2","GTTAAAATCTAGGCCT",4,58.51,9.64,-1.19,0.04,2.96,1.08,0,">1 nonsynonymous","K48N P169G",2
"lib2","SARS-CoV-2","GTTAAAATCTCAACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","T3R D98* N110A F167L",4
"lib2","SARS-CoV-2","GTTAAAATTAAATTAG",7,39.27,10.81,-0.02,0.06,3,1.02,0,">1 nonsynonymous","I2L Y35L N120M",3
"lib2","SARS-CoV-2","GTTAAAATTCTATCGC",2,21.43,6.34,-4.49,0.6,1.98,1.15,0.03,">1 nonsynonymous","I88Q D98T L122V V181H",4
"lib2","SARS-CoV-2","GTTAAACAAAAATTGT",2,23.52,9.89,-0.95,0.09,2.39,1.04,0,"1 nonsynonymous","F185P",1
"lib2","SARS-CoV-2","GTTAAACAAAGATACA",5,64.1,9.39,-1.45,0.1,1.79,1.08,0,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","GTTAAACAAAGTTCAA",1,123.66,10.03,-0.81,0.06,2.61,1.01,0,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","GTTAAACACATATAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G74T I88K N118* F167T",4
"lib2","SARS-CoV-2","GTTAAACACGAATCTC",9,71.91,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","T3S A33R C49M D90M",4
"lib2","SARS-CoV-2","GTTAAACAGGAATTAC",2,31.34,10.64,-0.2,0.06,2.98,1,0,">1 nonsynonymous","R73K K128V",2
"lib2","SARS-CoV-2","GTTAAACATAGACAAC",1,15.12,10.42,-0.42,0.1,2.91,1.1,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","GTTAAACATAGTACAA",2,0.91,NA,NA,NA,NA,NA,NA,"stop","A42* Y119S T201V",3
"lib2","SARS-CoV-2","GTTAAACATGATGTTT",5,20.92,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13Q L38T N58D S113M S129I",5
"lib2","SARS-CoV-2","GTTAAACCGAATCCAT",6,149.65,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6Q T63A V77H A81V F99L Q176L",6
"lib2","SARS-CoV-2","GTTAAACGCTACAAGC",3,81.49,10.85,0.01,0.05,2.87,1.14,0,"1 nonsynonymous","V37T",1
"lib2","SARS-CoV-2","GTTAAACTAATAATAT",1,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T D98K P161A",3
"lib2","SARS-CoV-2","GTTAAACTGTCTTAAA",3,30.46,6,-4.84,0.92,1.5,1.13,0.01,">1 nonsynonymous","R25N F99V K128T",3
"lib2","SARS-CoV-2","GTTAAACTTAGATAGG",1,17.75,6,-4.84,2,3,1.07,0,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","GTTAAACTTTGCACGC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","N24V G83* D97Q",3
"lib2","SARS-CoV-2","GTTAAAGAAATAATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91F T100I Y123N",3
"lib2","SARS-CoV-2","GTTAAAGAGTATATAT",2,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P F12I W106L",3
"lib2","SARS-CoV-2","GTTAAAGCAAGACAAC",3,11.16,7.96,-2.87,0.26,2.24,1.07,0.02,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","GTTAAAGCCCCACTTA",4,41.41,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A89K D97L S113R",3
"lib2","SARS-CoV-2","GTTAAAGCTGCAAGGA",1,12.05,10.81,-0.03,0.08,2.87,1.13,0,"1 nonsynonymous","V37C",1
"lib2","SARS-CoV-2","GTTAAAGTCCCTCGAG",1,30.76,10.68,-0.16,0.06,2.98,1.04,0,"1 nonsynonymous","Y35V",1
"lib2","SARS-CoV-2","GTTAAAGTTGACAAAA",2,18.96,6.07,-4.77,1.1,1.5,1.2,0.04,">1 nonsynonymous","G51M T100D",2
"lib2","SARS-CoV-2","GTTAAAGTTTTTATCG",1,9.39,NA,NA,NA,NA,NA,NA,"stop","V71* I88Q",2
"lib2","SARS-CoV-2","GTTAAATAAACCGGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39G K87H D112S K198M",4
"lib2","SARS-CoV-2","GTTAAATAAATATCGA",13,23.96,6.41,-4.42,0.38,1.5,1.24,0.01,">1 nonsynonymous","V11L V103G D112I S129T E186N",5
"lib2","SARS-CoV-2","GTTAAATAAGAATAGA",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I I72S N92R K198Q",4
"lib2","SARS-CoV-2","GTTAAATAAGCAGTCA",1,30.4,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","S19M N64V D137H I142N T148K L187F",6
"lib2","SARS-CoV-2","GTTAAATAGTCCTTAA",12,148.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19Q S36T Q84H D97E Y121T C158T",6
"lib2","SARS-CoV-2","GTTAAATCGACTCATA",6,125.48,9.5,-1.33,0.03,2.91,1.06,0,">1 nonsynonymous","V32T K114P E141A P197A",4
"lib2","SARS-CoV-2","GTTAAATGGAATTACG",1,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V V71Q P96Y V103M",4
"lib2","SARS-CoV-2","GTTAAATGGTCGGAAA",1,30.43,10.25,-0.59,0.06,2.97,1.02,0,">1 nonsynonymous","G9L D97R",2
"lib2","SARS-CoV-2","GTTAAATGGTTAATGA",12,185.96,10.21,-0.63,0.06,2.73,1.06,0,">1 nonsynonymous","S129I E141W",2
"lib2","SARS-CoV-2","GTTAAATTACCTAAGA",2,0.49,NA,NA,NA,NA,NA,NA,"stop","C6L A22* F47T L122S F160L P161W",6
"lib2","SARS-CoV-2","GTTAAATTCATTATTT",11,33.66,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L5S A14Q C102S G116L R179G",5
"lib2","SARS-CoV-2","GTTAAATTCCCAGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","L38A V77* D97A G196R",4
"lib2","SARS-CoV-2","GTTAAATTGGGAACGG",2,10.58,9.44,-1.39,0.25,1.55,1.04,0.03,">1 nonsynonymous","N1M A14Y N151I",3
"lib2","SARS-CoV-2","GTTAAATTTAGGGAAT",5,49.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86Y C150G F160K",3
"lib2","SARS-CoV-2","GTTAACAAAGTAGACT",5,93.38,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N40C G117F G146E",3
"lib2","SARS-CoV-2","GTTAACAAATCGTACC",8,57.22,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N58V A89L V173I",3
"lib2","SARS-CoV-2","GTTAACACAACAATTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","GTTAACACCACTTTCT",5,1.02,NA,NA,NA,NA,NA,NA,"stop","K26T Q144*",2
"lib2","SARS-CoV-2","GTTAACACTGAGAGTA",3,25.35,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","N92F T201K",2
"lib2","SARS-CoV-2","GTTAACACTTGGAGAA",7,54.62,7.19,-3.65,0.21,1.64,1.12,0.01,">1 nonsynonymous","A14Y N64H F126S T201L",4
"lib2","SARS-CoV-2","GTTAACACTTTTTGAA",1,27.56,6,-4.84,1.19,1.5,1.11,0.01,">1 nonsynonymous","L5M S19L L60V G86D P149T",5
"lib2","SARS-CoV-2","GTTAACAGGTCTAATT",3,100.31,10.72,-0.12,0.07,2.82,1.15,0,">1 nonsynonymous","P7H S43Y L122G",3
"lib2","SARS-CoV-2","GTTAACATATACGTTA",2,42.55,10.73,-0.1,0.06,2.9,1.1,0,">1 nonsynonymous","E10K K56Q",2
"lib2","SARS-CoV-2","GTTAACATATATTTGC",2,37.56,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2D G86F",2
"lib2","SARS-CoV-2","GTTAACATATTACACG",7,25.93,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D59P D90V C150R",3
"lib2","SARS-CoV-2","GTTAACATTGTCACCA",3,13.9,8.27,-2.57,0.22,1.87,1.09,0.01,">1 nonsynonymous","D112V Q144R",2
"lib2","SARS-CoV-2","GTTAACCATAGCCTCG",3,18.03,9.83,-1,0.12,2.08,1.01,0.01,"1 nonsynonymous","C49T",1
"lib2","SARS-CoV-2","GTTAACCATCGATTGT",3,123.45,10.74,-0.1,0.03,2.94,1.08,0,"1 nonsynonymous","V115N",1
"lib2","SARS-CoV-2","GTTAACCCAAGCCCAC",13,60.2,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S36D I80S T100M Y123T P149T H189Y K198R",7
"lib2","SARS-CoV-2","GTTAACCCATAAGTTT",2,65.71,10.82,-0.02,0.09,2.88,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","GTTAACCCCAAAGACA",7,89.57,7.21,-3.63,0.18,1.64,1.15,0.01,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","GTTAACCGAAATAAAT",1,13.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G74M N107I",2
"lib2","SARS-CoV-2","GTTAACCGCAACAATG",12,89.9,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5N S36V N107S E135P E141L",5
"lib2","SARS-CoV-2","GTTAACCTTGCAATTA",8,49.14,7.31,-3.52,0.35,1.5,1.15,0.04,">1 nonsynonymous","K56I A105L",2
"lib2","SARS-CoV-2","GTTAACGATACATTGA",6,95.74,10.62,-0.21,0.04,2.97,1.03,0,">1 nonsynonymous","I2N A33L F44A C61L",4
"lib2","SARS-CoV-2","GTTAACGCAAGAGTGC",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S P133R Y143M",3
"lib2","SARS-CoV-2","GTTAACGCAGTACGCT",8,190.33,8.25,-2.58,0.11,2.32,1.1,0,">1 nonsynonymous","N64R D75A Y119L F160D",4
"lib2","SARS-CoV-2","GTTAACGGGTGTCAAT",11,26.32,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K48Y A105M K128P G146L",4
"lib2","SARS-CoV-2","GTTAACGTCATTAAGC",1,14.91,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G9E T55V A89V K94V T148N",5
"lib2","SARS-CoV-2","GTTAACGTCGACGCGT",11,111.57,10,-0.84,0.06,2.53,1.01,0,">1 nonsynonymous","G9V D98L T148H",3
"lib2","SARS-CoV-2","GTTAACGTTCCGACTA",4,109.79,8.15,-2.69,0.14,2.61,1.16,0.01,">1 nonsynonymous","D97N Y175L",2
"lib2","SARS-CoV-2","GTTAACTAATACCATC",4,225.18,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S41E L57C A145Y Y175K P197L",5
"lib2","SARS-CoV-2","GTTAACTATCTATGGC",3,140.38,8.78,-2.06,0.06,2.83,1.07,0,"1 nonsynonymous","F126Q",1
"lib2","SARS-CoV-2","GTTAACTGACTCAAAC",2,38.46,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","L38Y P82L G174N",3
"lib2","SARS-CoV-2","GTTAACTGGGAGTATA",4,33.45,7.14,-3.7,0.44,1.5,1.36,0.05,">1 nonsynonymous","N13L N107T",2
"lib2","SARS-CoV-2","GTTAACTGTCAGTTGA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","N1P P7L V37*",3
"lib2","SARS-CoV-2","GTTAACTTCAGAACAC",9,68.11,6.4,-4.43,0.35,1.5,1.19,0.01,">1 nonsynonymous","S41L Y165S S184N",3
"lib2","SARS-CoV-2","GTTAAGAACATCTAAT",19,1.7,NA,NA,NA,NA,NA,NA,"stop","F62L V103L C150* V181K",4
"lib2","SARS-CoV-2","GTTAAGAAGTCCAATT",5,69.05,10,-0.83,0.06,2.61,1.12,0,">1 nonsynonymous","G51K V52A",2
"lib2","SARS-CoV-2","GTTAAGACCAACCCTA",5,74.86,10.2,-0.63,0.03,2.96,1.03,0,">1 nonsynonymous","I104M S129E P169F",3
"lib2","SARS-CoV-2","GTTAAGACCACTAACT",9,1.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38H",1
"lib2","SARS-CoV-2","GTTAAGACGTCACTGT",2,70.26,10.22,-0.61,0.05,2.85,1.01,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","GTTAAGACTACCATTA",15,1.9,NA,NA,NA,NA,NA,NA,"stop","V37Y L60V Y119L K198*",4
"lib2","SARS-CoV-2","GTTAAGACTCAGGATG",9,6.63,NA,NA,NA,NA,NA,NA,"stop","V37* P54L E154L",3
"lib2","SARS-CoV-2","GTTAAGAGAAATTGAT",2,56.4,10.07,-0.77,0.04,2.9,1.06,0,">1 nonsynonymous","N1T V37T L162F K199F",4
"lib2","SARS-CoV-2","GTTAAGAGAGATTGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","G146* P197W",2
"lib2","SARS-CoV-2","GTTAAGAGATCTGCCA",4,46.05,6,-4.84,0.79,1.5,1.16,0.01,">1 nonsynonymous","N1M S36L N58L A89F P161L K198W",6
"lib2","SARS-CoV-2","GTTAAGAGCTATGGTT",1,8.12,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S43R C61F D90M Y121R",4
"lib2","SARS-CoV-2","GTTAAGCAATACAGTG",1,9.75,10.79,-0.05,0.1,2.78,1.26,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTTAAGCAGGGACAAC",14,3.58,NA,NA,NA,NA,NA,NA,"stop","V52* S69R",2
"lib2","SARS-CoV-2","GTTAAGCCCAAACTAT",2,59.03,10.94,0.11,0.07,2.92,1.06,0,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","GTTAAGCCGGTGCCTA",9,241.67,10.84,0,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTAAGCTCAATCAAA",7,6.48,NA,NA,NA,NA,NA,NA,"stop","R16* F47S L111P Q176S",4
"lib2","SARS-CoV-2","GTTAAGCTTGAAACCA",5,53.46,6.24,-4.6,0.52,1.5,1.15,0.01,">1 nonsynonymous","Y143Q P177C",2
"lib2","SARS-CoV-2","GTTAAGCTTGTGCGAC",5,3.77,NA,NA,NA,NA,NA,NA,"stop","R16C N120* Y121H",3
"lib2","SARS-CoV-2","GTTAAGGCCCATAACA",1,35.85,9.18,-1.65,0.04,2.89,1.08,0,">1 nonsynonymous","V52Y Y119T",2
"lib2","SARS-CoV-2","GTTAAGGCCTTCGAGA",8,1.16,NA,NA,NA,NA,NA,NA,"stop","C31G Y91* E135G E141W S147V",5
"lib2","SARS-CoV-2","GTTAAGGCTAGTAAAC",13,126.9,9.78,-1.05,0.08,2.43,1.07,0,">1 nonsynonymous","N64M R78L D90L",3
"lib2","SARS-CoV-2","GTTAAGTACCAAAATC",1,38.56,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","G9L V180R",2
"lib2","SARS-CoV-2","GTTAAGTATTCTCAAT",5,120.1,10.35,-0.48,0.04,2.93,1.07,0,">1 nonsynonymous","L38M T55I",2
"lib2","SARS-CoV-2","GTTAAGTGCGAGATAT",7,212.67,9.76,-1.08,0.02,2.91,1.07,0,">1 nonsynonymous","E154L P169S",2
"lib2","SARS-CoV-2","GTTAAGTTTGTGTTCT",7,45.84,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A89R L95T K128P",3
"lib2","SARS-CoV-2","GTTAATAACCCGCCTT",13,97.49,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S43A S129L D137L V153E Y165G",5
"lib2","SARS-CoV-2","GTTAATAACGAAAGGT",1,20.23,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V32L G83F Y123P",3
"lib2","SARS-CoV-2","GTTAATACAAACAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N151P G172*",2
"lib2","SARS-CoV-2","GTTAATACAGTAAATT",1,6.14,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","C61S A145Y Y165G",3
"lib2","SARS-CoV-2","GTTAATACCTAAAAGC",11,150.32,9.65,-1.19,0.03,2.83,1.05,0,">1 nonsynonymous","T3F T63L Y119R S200Y",4
"lib2","SARS-CoV-2","GTTAATACGAATTTAA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q D59F V173E",3
"lib2","SARS-CoV-2","GTTAATACTGAATGCA",1,2.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q S41R D68V C102L G117D",5
"lib2","SARS-CoV-2","GTTAATACTTCCAGAA",3,16.41,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F17R K48M P133M",3
"lib2","SARS-CoV-2","GTTAATAGATTTAAAC",4,39.37,6.34,-4.49,0.37,1.5,1.14,0.01,">1 nonsynonymous","V77C S139L G152N",3
"lib2","SARS-CoV-2","GTTAATAGCAGCCGGA",7,0,NA,NA,NA,NA,NA,NA,"stop","I28M N118I R124K P133* E141V P149T",6
"lib2","SARS-CoV-2","GTTAATAGCGTGGAAC",19,100.05,7.63,-3.2,0.27,1.5,1.05,0.02,">1 nonsynonymous","D68M E141S P149S C195Y",4
"lib2","SARS-CoV-2","GTTAATAGTCCTTTCA",3,30.07,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","A89C G101C",2
"lib2","SARS-CoV-2","GTTAATATCACAATAC",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90A F99I A105E",3
"lib2","SARS-CoV-2","GTTAATATTCAGCACT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","R27W C49* Y91Q P161R",4
"lib2","SARS-CoV-2","GTTAATCAACCGCGTA",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F Y91S G101S L131V N171G A192E",6
"lib2","SARS-CoV-2","GTTAATCAGACTTACC",3,13.23,8.47,-2.36,0.3,1.54,1.1,0.04,">1 nonsynonymous","D59F K128F F185V",3
"lib2","SARS-CoV-2","GTTAATCATCGAAGGT",5,88.86,8.33,-2.5,0.16,1.5,1.15,0.01,">1 nonsynonymous","Y35S L95T L188V",3
"lib2","SARS-CoV-2","GTTAATGAAGTGGACT",1,32.69,10.34,-0.5,0.09,2.89,1.04,0,">1 nonsynonymous","A14E K132N",2
"lib2","SARS-CoV-2","GTTAATGATTCACACT",1,9.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96I E154I",2
"lib2","SARS-CoV-2","GTTAATGTTGGAACTT",8,97.82,9.67,-1.17,0.04,2.9,1.1,0,">1 nonsynonymous","T140N N171L",2
"lib2","SARS-CoV-2","GTTAATTAATAGCTTG",2,31.68,8.73,-2.1,0.09,2.76,1,0,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","GTTAATTCCAAGACCC",12,66.49,7.23,-3.6,0.5,1.5,1,0.07,">1 nonsynonymous","Y50N S69E",2
"lib2","SARS-CoV-2","GTTAATTCTAACGATA",3,83.54,10.85,0.01,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTAATTTACTCAATA",1,16.66,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","S69H I104K K198M T201L",4
"lib2","SARS-CoV-2","GTTACAAAAATCTAAA",8,60.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D59Q F99A S113G A190R",4
"lib2","SARS-CoV-2","GTTACAAAAGGCCACT",5,119.79,9.87,-0.97,0.06,2.01,1.05,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","GTTACAAAATGAATTT",15,266.87,7.28,-3.56,0.08,1.85,1.11,0,"1 nonsynonymous","C158M",1
"lib2","SARS-CoV-2","GTTACAAAGCTAAAAT",1,60.41,10.78,-0.06,0.04,2.92,1.1,0,">1 nonsynonymous","N58H T148S P197S",3
"lib2","SARS-CoV-2","GTTACAAATGCAGCCT",6,54.14,9.68,-1.16,0.1,2.06,1,0,">1 nonsynonymous","L5S F99H",2
"lib2","SARS-CoV-2","GTTACAACAAAACGCA",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S Y121S E154P",3
"lib2","SARS-CoV-2","GTTACAACAACCGAAA",6,3.86,NA,NA,NA,NA,NA,NA,"stop","A42V T170*",2
"lib2","SARS-CoV-2","GTTACAACCAAAATTG",1,24.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N30M L60Q N107I",3
"lib2","SARS-CoV-2","GTTACAAGCTTAGGAG",5,53.62,10.84,0,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTACAAGTGAGCGCT",2,15.03,9.78,-1.05,0.14,2,1,0.01,">1 nonsynonymous","F8L T100I Y123L P133V",4
"lib2","SARS-CoV-2","GTTACAATATAAAAGG",1,20.59,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F47R V71G R127L",3
"lib2","SARS-CoV-2","GTTACAATCTAATTCG",3,18.32,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S41A W106S V173S",3
"lib2","SARS-CoV-2","GTTACAATTCATTTTA",1,128.08,9.01,-1.82,0.08,2.35,1.07,0,">1 nonsynonymous","Q144A P177S",2
"lib2","SARS-CoV-2","GTTACAATTCTCAAAT",1,11.03,6.36,-4.48,0.9,1.53,1.16,0.03,">1 nonsynonymous","L38G P161S",2
"lib2","SARS-CoV-2","GTTACACAAAATGCAT",12,234.68,9.99,-0.84,0.03,2.97,1.03,0,">1 nonsynonymous","Y39A D59G Q168M",3
"lib2","SARS-CoV-2","GTTACACAACAACAAC",9,129.17,9.23,-1.6,0.1,1.76,1.06,0,">1 nonsynonymous","L57C K94A",2
"lib2","SARS-CoV-2","GTTACACAACAACGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57C K94A",2
"lib2","SARS-CoV-2","GTTACACGAAAGCACT",15,34.5,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A42Y E141K G155V N171K",4
"lib2","SARS-CoV-2","GTTACACTAACATTAT",3,143.51,10.8,-0.04,0.07,2.85,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","GTTACACTGGTGATAA",2,10.02,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L5M I28P S45P G86E S139T V181K",6
"lib2","SARS-CoV-2","GTTACACTTAAAAAAG",4,63.6,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T55N C150F P169S",3
"lib2","SARS-CoV-2","GTTACAGAACTACTCA",5,31.12,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","D90G S113N",2
"lib2","SARS-CoV-2","GTTACAGAAGGAGTGG",7,41.17,6,-4.84,1.42,1.5,1.07,0.01,">1 nonsynonymous","Y35V T85Y P96V N118G",4
"lib2","SARS-CoV-2","GTTACAGACCCCCACC",7,56.44,10.39,-0.44,0.07,2.86,1.03,0,">1 nonsynonymous","R136S T201C",2
"lib2","SARS-CoV-2","GTTACAGATAACGTGG",1,46.14,10.47,-0.37,0.07,2.96,1.01,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","GTTACAGCAAAAGAGG",3,33.43,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T55P T85D K94D",3
"lib2","SARS-CoV-2","GTTACAGGATGCGTCT",4,53.76,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K56S Y121P Y165L",3
"lib2","SARS-CoV-2","GTTACAGTGAAATGCT",4,0.6,NA,NA,NA,NA,NA,NA,"stop","K26I D98*",2
"lib2","SARS-CoV-2","GTTACAGTGGACGAAC",6,68.82,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I104M Y121S Y175V",3
"lib2","SARS-CoV-2","GTTACAGTGTAGCAAA",1,15.85,9.95,-0.89,0.11,2.59,1.11,0.01,"1 nonsynonymous","R25S",1
"lib2","SARS-CoV-2","GTTACAGTTCATGCTT",9,46.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A22Q P96Y R124K A190E",4
"lib2","SARS-CoV-2","GTTACATATCCATACA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","W106* V115Y T170Y",3
"lib2","SARS-CoV-2","GTTACATATGGAATTA",15,140.32,10.85,0.01,0.03,2.91,1.08,0,"1 nonsynonymous","F160R",1
"lib2","SARS-CoV-2","GTTACATTCATTCAAG",13,164.3,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L38W N92T S108N L125P",4
"lib2","SARS-CoV-2","GTTACATTCTTGACAA",8,51.29,6.07,-4.77,0.46,1.5,1.12,0.01,">1 nonsynonymous","N58M V65E F134S",3
"lib2","SARS-CoV-2","GTTACATTGTTTTTTT",8,20.12,6.61,-4.23,0.46,1.5,1.18,0.04,">1 nonsynonymous","L95R N120F D137P N151W",4
"lib2","SARS-CoV-2","GTTACCAAGTAATAAA",4,66.63,10.84,0,0.05,2.9,1.11,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","GTTACCAATTACACAC",2,24.31,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3I G101T Y143V",3
"lib2","SARS-CoV-2","GTTACCAATTTGTGTA",4,2.96,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib2","SARS-CoV-2","GTTACCATCTTGTGAT",2,18.47,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","L95S L187H",2
"lib2","SARS-CoV-2","GTTACCCAAAGCTGCA",16,235.82,8.66,-2.17,0.11,1.87,1.14,0.01,">1 nonsynonymous","T3I K56V K87F D97C V115A E154Q G174S",7
"lib2","SARS-CoV-2","GTTACCCATCATTTTA",4,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H K87T V103R Q144E N171V",5
"lib2","SARS-CoV-2","GTTACCCCAACGCGAA",3,126.67,10.57,-0.27,0.03,2.95,1,0,">1 nonsynonymous","N4A I104C",2
"lib2","SARS-CoV-2","GTTACCCTAGTGCACT",7,51.24,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","P96T R136N",2
"lib2","SARS-CoV-2","GTTACCCTCCGATAAA",10,141.89,9.24,-1.6,0.09,1.79,1.1,0,">1 nonsynonymous","S19A E135W",2
"lib2","SARS-CoV-2","GTTACCGAACTATCCA",2,11.16,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","D59T N92V S113I S147R Y165H S184Y A190E T201S",8
"lib2","SARS-CoV-2","GTTACCGACTCCGTGA",6,111.42,7.98,-2.86,0.31,1.5,1.06,0.04,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","GTTACCGCTTTTACTG",1,25.12,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","G86T K94F P133V G152L E186G",5
"lib2","SARS-CoV-2","GTTACCGGAAAAACTA",1,5.3,11.04,0.2,0.11,2.85,1.12,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","GTTACCGTATGAACCA",12,104.83,10.8,-0.03,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTACCTAAAAAAAAT",1,27.3,10.73,-0.11,0.08,2.87,1.12,0,">1 nonsynonymous","R27K P149L",2
"lib2","SARS-CoV-2","GTTACCTAATGAAAAA",2,44.38,10.92,0.08,0.05,2.91,1.06,0,">1 nonsynonymous","N64L Q163Y",2
"lib2","SARS-CoV-2","GTTACCTACTAGGTCT",4,41.22,7.38,-3.46,0.16,1.5,1.07,0.01,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","GTTACCTGCTATAAAC",3,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T S45Y N64P V173T K198L",5
"lib2","SARS-CoV-2","GTTACCTGTACCTTCT",3,43.39,10.95,0.11,0.07,2.96,1.02,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","GTTACCTGTCAAGCTA",1,16.57,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T3N V37C I72W N109D F156V",5
"lib2","SARS-CoV-2","GTTACCTTAGTAATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* A42D Y91C E135L F160S F167H",6
"lib2","SARS-CoV-2","GTTACCTTATCATGAC",3,27.57,10.11,-0.72,0.11,2.75,1.02,0.01,">1 nonsynonymous","V11T L122C G152N",3
"lib2","SARS-CoV-2","GTTACGAAATTGCAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169A",1
"lib2","SARS-CoV-2","GTTACGAATAAACAGC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49P",1
"lib2","SARS-CoV-2","GTTACGAATACCCGTA",4,0.91,NA,NA,NA,NA,NA,NA,"stop","F17P Y35V A42* P54T V103S Y121E Q176P P197S",8
"lib2","SARS-CoV-2","GTTACGAGAGACAAAG",11,72.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6Y R25D S69R Y143W",4
"lib2","SARS-CoV-2","GTTACGAGATATATAG",6,92.62,9.94,-0.89,0.09,2.35,1.01,0,">1 nonsynonymous","D34R T85I",2
"lib2","SARS-CoV-2","GTTACGAGCCACGCGT",4,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39S L57S R73Y N151M",4
"lib2","SARS-CoV-2","GTTACGAGGACTTAGA",5,4.21,NA,NA,NA,NA,NA,NA,"stop","S29Y S43* V65Q I88T G172R",5
"lib2","SARS-CoV-2","GTTACGAGGTGATTTA",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37N W106L P149S F156L P191S",5
"lib2","SARS-CoV-2","GTTACGATAATACTTT",1,3.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","GTTACGCAATTATTTG",3,0,NA,NA,NA,NA,NA,NA,"stop","N13S V115* K128L G166T",4
"lib2","SARS-CoV-2","GTTACGCGACCATAAC",29,622.21,10.82,-0.01,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTACGGAAGATGCAT",4,18.98,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15E K48E A81I W106T S200L",5
"lib2","SARS-CoV-2","GTTACGGGGGGTAGTG",10,2.3,NA,NA,NA,NA,NA,NA,"stop","L5* R27W Y91H Y123D T201W",5
"lib2","SARS-CoV-2","GTTACGTATGTTCCTG",2,97.82,10.22,-0.62,0.08,2.66,1.02,0,">1 nonsynonymous","Y66M Q84N",2
"lib2","SARS-CoV-2","GTTACGTCATACTAGT",2,22.07,10.26,-0.58,0.15,2.55,1.05,0.01,">1 nonsynonymous","L5E S43R L95T K199P",4
"lib2","SARS-CoV-2","GTTACGTTTCCAATTC",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23E K56N A89L S129N P161S",5
"lib2","SARS-CoV-2","GTTACTAAAAAGTTGC",5,50.2,7.13,-3.71,0.38,1.5,1.18,0.03,">1 nonsynonymous","S19T Y35C P197T",3
"lib2","SARS-CoV-2","GTTACTAACGAACACA",1,6.03,10.31,-0.52,0.33,2.75,1.16,0.03,"1 nonsynonymous","N109A",1
"lib2","SARS-CoV-2","GTTACTAACTTGACGG",2,6.37,NA,NA,NA,NA,NA,NA,"stop","R27* T46P Y119R S129I",4
"lib2","SARS-CoV-2","GTTACTAAGACGGGAA",4,91.92,10.38,-0.46,0.05,2.95,1.07,0,">1 nonsynonymous","C61N G116L K198G",3
"lib2","SARS-CoV-2","GTTACTAATAGGACTT",3,46.48,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","F12Y V37W S45F N157L T201G",5
"lib2","SARS-CoV-2","GTTACTAATCACCTTT",5,3.86,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib2","SARS-CoV-2","GTTACTAATTCAAGGT",1,7.73,10.25,-0.59,0.07,2.63,1.39,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","GTTACTAATTCCCCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","C61L Y91* P149S",3
"lib2","SARS-CoV-2","GTTACTACAAATGCTA",6,104.31,9.47,-1.37,0.04,2.92,1.06,0,">1 nonsynonymous","T46V Y119T",2
"lib2","SARS-CoV-2","GTTACTAGAAATTAAA",6,204.01,10.77,-0.07,0.04,2.94,1.07,0,">1 nonsynonymous","H189P V194I",2
"lib2","SARS-CoV-2","GTTACTAGGCTCTTTA",16,276.99,6.02,-4.81,0.58,1.5,1.16,0.01,">1 nonsynonymous","R27K S53M Y175G",3
"lib2","SARS-CoV-2","GTTACTCAATCAATTC",2,15.53,10.69,-0.14,0.07,2.91,1.1,0,">1 nonsynonymous","R16V T85D L122M F134G",4
"lib2","SARS-CoV-2","GTTACTCAGTGGAATT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","T3S T100* A105G S200F",4
"lib2","SARS-CoV-2","GTTACTCATGTTATGA",4,26.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N107C Y119D F134I",3
"lib2","SARS-CoV-2","GTTACTCGAGTACAAA",5,72.05,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F126H C150F",2
"lib2","SARS-CoV-2","GTTACTCTAAATAGTG",3,53.07,10.49,-0.35,0.05,2.85,1.13,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","GTTACTCTGCTCCTGA",4,69.6,10.35,-0.48,0.05,2.92,1.04,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","GTTACTCTGTAAAGTG",5,118.28,10.81,-0.03,0.04,2.99,1.03,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","GTTACTGAATATATGT",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58W N92D",2
"lib2","SARS-CoV-2","GTTACTGCATGGTAAT",4,48.35,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","S29L G51V C102W",3
"lib2","SARS-CoV-2","GTTACTGGTCAGACCT",3,39.19,9.37,-1.46,0.06,3,1.06,0,">1 nonsynonymous","I2V Y119M",2
"lib2","SARS-CoV-2","GTTACTGTGGCCTAGG",6,35.81,10.76,-0.07,0.07,2.91,1.09,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","GTTACTTAATTGAGGA",3,63.97,10.08,-0.75,0.03,2.92,1.01,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","GTTACTTATGCTGCGT",4,29.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51W A105V D112P T201N",4
"lib2","SARS-CoV-2","GTTACTTCCAAAAGAT",4,108.59,10.13,-0.71,0.06,2.62,1.03,0,"1 nonsynonymous","A81D",1
"lib2","SARS-CoV-2","GTTACTTGCCCATAAA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","V52* N120F S139H",3
"lib2","SARS-CoV-2","GTTAGAAAACTCATGT",3,209.53,6,-4.84,1.16,1.5,1.22,0.02,">1 nonsynonymous","N24T Y35H E76C",3
"lib2","SARS-CoV-2","GTTAGAAAGTACTTAA",6,101.79,6,-4.84,0.88,1.5,1.12,0,">1 nonsynonymous","C6L N109G R179N",3
"lib2","SARS-CoV-2","GTTAGAAATCTTGATA",1,72.04,10.17,-0.67,0.06,2.82,1.03,0,">1 nonsynonymous","L57V Q84K",2
"lib2","SARS-CoV-2","GTTAGAACAAAGGAAC",12,120.02,9.39,-1.45,0.13,1.79,1.09,0.01,">1 nonsynonymous","D34R K48L N120Y",3
"lib2","SARS-CoV-2","GTTAGAAGATGACATG",3,103.2,9.17,-1.66,0.07,2.61,1.06,0,">1 nonsynonymous","N64T N107M",2
"lib2","SARS-CoV-2","GTTAGAATTAATTATT",6,113.02,10.87,0.04,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTAGACGGATAAACT",10,21.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C49L D68Q L95P",3
"lib2","SARS-CoV-2","GTTAGAGAAATCGCAT",2,3.47,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTTAGAGTCATATTAA",5,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V F47E T85M V103S P133H E141V F160G",7
"lib2","SARS-CoV-2","GTTAGATAGACCACAG",8,7.37,7.6,-3.24,0.49,2.24,1.19,0.02,">1 nonsynonymous","S19P K56V C61K C102L F156R",5
"lib2","SARS-CoV-2","GTTAGATCGTGTTAAA",15,283.74,10.33,-0.5,0.03,2.87,1.05,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","GTTAGCAAATGCATGG",2,31.66,10.87,0.03,0.05,2.96,1.06,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","GTTAGCAGCTAATTGA",5,74.18,10.18,-0.66,0.06,2.9,1.01,0,">1 nonsynonymous","C6S T63N",2
"lib2","SARS-CoV-2","GTTAGCAGGAACTGAA",1,14.53,10.53,-0.3,0.06,2.92,1,0,">1 nonsynonymous","T63N Q144S S200K",3
"lib2","SARS-CoV-2","GTTAGCAGTAAACTCA",4,45.98,9.29,-1.54,0.17,2.02,1.06,0.01,">1 nonsynonymous","G116V I138P P149T",3
"lib2","SARS-CoV-2","GTTAGCATATGAGGCA",9,96.2,10.79,-0.05,0.04,2.89,1.1,0,"1 nonsynonymous","V194I",1
"lib2","SARS-CoV-2","GTTAGCATGACGATCT",11,88.72,6.1,-4.73,0.89,1.5,1.16,0.03,">1 nonsynonymous","C49D F156P",2
"lib2","SARS-CoV-2","GTTAGCATTAATATTC",3,110.69,10.76,-0.07,0.06,2.93,1.08,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","GTTAGCCGTTGGGCAA",13,25.66,7.3,-3.54,0.47,1.5,1.03,0.06,">1 nonsynonymous","C6H N13V P82T R127C G146A",5
"lib2","SARS-CoV-2","GTTAGCCTAAAACGAT",6,65.35,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4K S45T Q84R Y121L Y175G",5
"lib2","SARS-CoV-2","GTTAGCGAAGGAATCC",1,11.65,9.82,-1.02,0.1,2.83,1.11,0.01,">1 nonsynonymous","Y119S S129T",2
"lib2","SARS-CoV-2","GTTAGCGAGAAAACGG",3,69.86,6.34,-4.49,0.49,1.5,1.17,0.01,">1 nonsynonymous","G9E I28E T85Q G117A",4
"lib2","SARS-CoV-2","GTTAGCGGTATAGAAC",3,31.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R78I A81G N107S Y121T F185T P197M",6
"lib2","SARS-CoV-2","GTTAGCGTTAGGGATT",2,15.19,6.56,-4.28,0.37,1.5,1.15,0.01,">1 nonsynonymous","F70W P169A",2
"lib2","SARS-CoV-2","GTTAGGACCATATCAG",1,9.3,9.41,-1.42,0.23,2.07,1.12,0.01,"1 nonsynonymous","K94F",1
"lib2","SARS-CoV-2","GTTAGGCCCGCCCGAG",4,143.28,10.12,-0.71,0.04,2.96,1.04,0,">1 nonsynonymous","V37F I142P G152H",3
"lib2","SARS-CoV-2","GTTAGGCCTATGGGCA",6,66.13,7.42,-3.41,0.27,1.5,1.1,0.02,">1 nonsynonymous","T85K Y91T S164V",3
"lib2","SARS-CoV-2","GTTAGGTAGGGTAATG",4,21.11,9.74,-1.1,0.23,1.98,1,0.02,">1 nonsynonymous","C61S W106G V153K",3
"lib2","SARS-CoV-2","GTTAGGTTCAACAAGT",10,317.64,9.9,-0.94,0.07,2.39,1.04,0,">1 nonsynonymous","N40I T63G",2
"lib2","SARS-CoV-2","GTTAGGTTTATACCAG",5,1.54,NA,NA,NA,NA,NA,NA,"stop","R16L C61* Y91C K198S",4
"lib2","SARS-CoV-2","GTTAGTAATTGTAAAG",1,6.57,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L5M N107S N157S P177S",4
"lib2","SARS-CoV-2","GTTAGTACTTATACGA",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93S S113L P133S P161I E186C",5
"lib2","SARS-CoV-2","GTTAGTACTTGAACAG",7,26.76,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F8E Q168L",2
"lib2","SARS-CoV-2","GTTAGTATAACGTAAT",2,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51A A105R V173E",3
"lib2","SARS-CoV-2","GTTAGTCCATAAAAAA",6,102.67,8.39,-2.45,0.16,2.32,1.07,0.01,">1 nonsynonymous","N4R S113E",2
"lib2","SARS-CoV-2","GTTAGTCCTGACTACG",5,59.25,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I2C P82I D90C K128R I142M",5
"lib2","SARS-CoV-2","GTTAGTCGTATGTACG",9,20.36,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I88W T100Y W106R S113H G174I",5
"lib2","SARS-CoV-2","GTTAGTGAATATTCTA",7,13.31,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","D98Y V103K",2
"lib2","SARS-CoV-2","GTTAGTGCCTTCCCCA",1,119.3,8.66,-2.18,0.08,2.45,1.13,0,">1 nonsynonymous","I104C L125I I142N",3
"lib2","SARS-CoV-2","GTTAGTGGAAGCATGA",1,37.28,8.32,-2.52,0.12,2.53,1.02,0.01,">1 nonsynonymous","G51Q D90S T170L",3
"lib2","SARS-CoV-2","GTTAGTGTCCCACTTT",1,61.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12L T46A T85P Y121D",4
"lib2","SARS-CoV-2","GTTAGTTAACCACTAA",6,40.93,9.26,-1.58,0.22,1.57,1.09,0.02,">1 nonsynonymous","F8S W106M",2
"lib2","SARS-CoV-2","GTTAGTTCTGTGACAT",2,28.51,10.68,-0.16,0.17,2.61,1,0.01,">1 nonsynonymous","Y35I K128Q S139E",3
"lib2","SARS-CoV-2","GTTAGTTGCCTTAGAC",4,21.01,6.86,-3.97,0.38,2.51,1.16,0.02,">1 nonsynonymous","G86P A105N Y178P",3
"lib2","SARS-CoV-2","GTTAGTTGTCCATATC",10,6.32,NA,NA,NA,NA,NA,NA,"stop","R27* K56I T63* G86S Y165E",5
"lib2","SARS-CoV-2","GTTAGTTTCCGTTTTA",4,3.32,NA,NA,NA,NA,NA,NA,"stop","A81T Y178*",2
"lib2","SARS-CoV-2","GTTATAAAAGTTGAAG",1,19.84,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","A89Y D90Y P161Y",3
"lib2","SARS-CoV-2","GTTATAAAGGTCCTCA",3,104.1,10.94,0.1,0.04,2.9,1.1,0,"1 nonsynonymous","K56N",1
"lib2","SARS-CoV-2","GTTATAAATTAAGAGT",5,29.42,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","R73M I88M F99V",3
"lib2","SARS-CoV-2","GTTATAAATTACCGCG",3,7.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S D59T V77W G166F",4
"lib2","SARS-CoV-2","GTTATAACAACAAATT",3,38.49,10.4,-0.43,0.11,2.75,1.11,0.01,">1 nonsynonymous","V32L C61T K128I",3
"lib2","SARS-CoV-2","GTTATAACGACATCAT",9,115.33,10.83,-0.01,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTATAACGTTCTCAC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","N4H S19G S69T Y143*",4
"lib2","SARS-CoV-2","GTTATAATAATCTTAG",3,25.89,10.44,-0.39,0.39,1.79,1.11,0.07,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","GTTATAATCATCCTAC",1,18.26,10.53,-0.31,0.09,2.99,1,0,">1 nonsynonymous","N4Y C61K",2
"lib2","SARS-CoV-2","GTTATAATTCAGTACA",2,19.83,6.18,-4.65,0.45,3,1.14,0.01,">1 nonsynonymous","A18L E76M T170F",3
"lib2","SARS-CoV-2","GTTATACAATAAGTGT",2,28.9,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V32K A42C D75P G83E",4
"lib2","SARS-CoV-2","GTTATACAGTTAAGAC",11,123.35,10.87,0.04,0.04,2.94,1.08,0,">1 nonsynonymous","A33W F160S",2
"lib2","SARS-CoV-2","GTTATACGTGAACTAG",26,203.29,6,-4.84,1.81,1.5,1.18,0.01,">1 nonsynonymous","V103L N118G",2
"lib2","SARS-CoV-2","GTTATAGAATTGGCGG",1,37.52,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","P54S R179N",2
"lib2","SARS-CoV-2","GTTATAGAGGATTATA",3,30.23,8.6,-2.24,0.2,1.54,1.1,0.02,">1 nonsynonymous","P54T W106R G116F",3
"lib2","SARS-CoV-2","GTTATAGATACCCAGT",4,109.53,10.69,-0.15,0.03,2.94,1.08,0,">1 nonsynonymous","R78H I104V L187Q",3
"lib2","SARS-CoV-2","GTTATAGCAAATAGAT",4,81.35,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5R G51I K128L T170F",4
"lib2","SARS-CoV-2","GTTATAGCTTGGCAAT",6,5.07,NA,NA,NA,NA,NA,NA,"stop","C61H D68R D137* N151*",4
"lib2","SARS-CoV-2","GTTATAGTGTGCGCGC",8,52.1,10.62,-0.21,0.05,2.97,1.05,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","GTTATAGTTCTCTTCA",4,56.43,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S19V Y35T Y165R",3
"lib2","SARS-CoV-2","GTTATATAAAGATTTT",10,188.06,7.5,-3.34,0.13,1.5,1.11,0,">1 nonsynonymous","T55S T85K D98T Y143W V153I T170L",6
"lib2","SARS-CoV-2","GTTATATAAGGAAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","S69K V103* N157K C158Y G166A",5
"lib2","SARS-CoV-2","GTTATATACTCTGCCT",2,37.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L57V S108D",2
"lib2","SARS-CoV-2","GTTATATAGGGCAATA",1,21.6,10.76,-0.07,0.06,2.86,1.14,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","GTTATATATTTAGACA",2,0.83,NA,NA,NA,NA,NA,NA,"stop","P7S Q84R W106Y L122* S147K L183N",6
"lib2","SARS-CoV-2","GTTATATCAAACACTT",7,104.57,8.71,-2.12,0.06,2.74,1.07,0,">1 nonsynonymous","T15R L125P A145S",3
"lib2","SARS-CoV-2","GTTATATCAGATTACG",2,38.03,9.72,-1.12,0.14,2.01,1.07,0.01,">1 nonsynonymous","S36V L60H S129I E141L",4
"lib2","SARS-CoV-2","GTTATATTACAAAGTT",9,38.02,8.69,-2.15,0.25,1.5,1,0.04,">1 nonsynonymous","K26Q T100R V103L",3
"lib2","SARS-CoV-2","GTTATATTACGTATGA",6,0.55,NA,NA,NA,NA,NA,NA,"stop","N1R K48H R136* Q168P",4
"lib2","SARS-CoV-2","GTTATATTTAAGTTAC",7,123.13,10.52,-0.31,0.03,2.89,1.09,0,"1 nonsynonymous","Y143H",1
"lib2","SARS-CoV-2","GTTATATTTCTAAATT",10,58.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I80R Y121L",2
"lib2","SARS-CoV-2","GTTATATTTTGACAGA",7,152.15,10.08,-0.76,0.05,2.65,1.02,0,">1 nonsynonymous","K56R D90L D97T",3
"lib2","SARS-CoV-2","GTTATCAAGAAAACCC",4,57.04,9.32,-1.51,0.12,2,1.09,0.01,">1 nonsynonymous","F17C E154P",2
"lib2","SARS-CoV-2","GTTATCAATGGTTAAA",9,115.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K48N T148E P161L",3
"lib2","SARS-CoV-2","GTTATCACCATGATAA",1,8.58,8.66,-2.17,0.13,2.19,1.01,0.01,">1 nonsynonymous","S36L N118A Q144V",3
"lib2","SARS-CoV-2","GTTATCACGAAAGACA",5,48.51,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N30F V37Y L60V G86W G152S P169R",6
"lib2","SARS-CoV-2","GTTATCATCATATACC",2,9.44,NA,NA,NA,NA,NA,0.49,">1 nonsynonymous","Y50N T55G N120D Q176L",4
"lib2","SARS-CoV-2","GTTATCCGGTCCACGG",6,63.01,9.55,-1.29,0.07,2.17,1,0,">1 nonsynonymous","L5H Y50N L60Y",3
"lib2","SARS-CoV-2","GTTATCCTAAACTAAA",6,14.36,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","GTTATCCTTGGGAGTA",2,9.04,7.25,-3.58,0.57,1.5,1.01,0.07,">1 nonsynonymous","G86R I104R Q144P T201F",4
"lib2","SARS-CoV-2","GTTATCGAAAAAAAAG",3,23.25,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","T3C W23K G146F G152S",4
"lib2","SARS-CoV-2","GTTATCGAATCGAGCC",1,21.43,10.72,-0.11,0.08,2.72,1.31,0,"1 nonsynonymous","S147T",1
"lib2","SARS-CoV-2","GTTATCGATCCTACCA",1,2.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","GTTATCGGTGATTATA",3,63.12,10.59,-0.25,0.05,2.96,1.03,0,">1 nonsynonymous","E141K S184I",2
"lib2","SARS-CoV-2","GTTATCGTCTCTAAAG",2,41.13,8.56,-2.28,0.11,1.99,1.07,0,">1 nonsynonymous","N30S F44N D98N R136V A192N",5
"lib2","SARS-CoV-2","GTTATCGTTTAACACG",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17G F70S L122D",3
"lib2","SARS-CoV-2","GTTATCTAATTCCCAA",25,318.34,10.37,-0.46,0.03,2.88,1.04,0,">1 nonsynonymous","Y50F S184R",2
"lib2","SARS-CoV-2","GTTATCTCAAAAATCT",18,57.1,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","F99R D112V E135L P197T",4
"lib2","SARS-CoV-2","GTTATCTCATTTGGAT",9,59.18,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8E N107G S147Y N151L V173N",5
"lib2","SARS-CoV-2","GTTATCTCCTTGCCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L P82I Y123T V180S",4
"lib2","SARS-CoV-2","GTTATCTGGAGATATT",7,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113R R136L",2
"lib2","SARS-CoV-2","GTTATCTGGATGCTAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Y35* I104K N130L",3
"lib2","SARS-CoV-2","GTTATCTTTTAAAACC",4,120.41,10.79,-0.04,0.03,2.94,1.07,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","GTTATGAAAAAGCTTA",9,89.72,9.77,-1.06,0.08,2.87,1.13,0,">1 nonsynonymous","Y39M T170H",2
"lib2","SARS-CoV-2","GTTATGAAGCCCTAGT",7,1.65,NA,NA,NA,NA,NA,NA,"stop","F8* G74L N107S S129Y E141P G146C Q168P G172V",8
"lib2","SARS-CoV-2","GTTATGAATATGCCGT",2,26.59,9.35,-1.49,0.12,1.97,1.06,0.01,"1 nonsynonymous","F185R",1
"lib2","SARS-CoV-2","GTTATGAGACCGCTTA",28,336.31,9.96,-0.88,0.05,2.78,1.03,0,">1 nonsynonymous","C31F L95V",2
"lib2","SARS-CoV-2","GTTATGATCATTGTTC",7,21.44,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T3L Y50F K56A L95R G172C",5
"lib2","SARS-CoV-2","GTTATGCAAATATAAA",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80G N107R F126V",3
"lib2","SARS-CoV-2","GTTATGCATTCTGGTA",3,51.31,10.03,-0.81,0.09,2.45,1.04,0,"1 nonsynonymous","L38A",1
"lib2","SARS-CoV-2","GTTATGGTCAAACTCC",14,107.1,7.18,-3.66,0.27,1.5,1.14,0.02,"1 nonsynonymous","D68W",1
"lib2","SARS-CoV-2","GTTATGGTTTTTGCTT",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D G86D S113F",3
"lib2","SARS-CoV-2","GTTATGTATATGGTAA",6,1.25,NA,NA,NA,NA,NA,NA,"stop","K48* V181R",2
"lib2","SARS-CoV-2","GTTATGTGAGAACGTT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R F99I K128I",3
"lib2","SARS-CoV-2","GTTATGTTTTAACCCT",1,5.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141H",1
"lib2","SARS-CoV-2","GTTATTAAATTTCTGT",4,107.16,10.02,-0.82,0.06,2.66,1.01,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","GTTATTAACGACGCAG",4,81.26,8.56,-2.28,0.1,1.98,1.08,0,">1 nonsynonymous","S45Y N64M P177A",3
"lib2","SARS-CoV-2","GTTATTAAGACCGTAA",7,58.77,10.56,-0.28,0.07,2.86,1.07,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","GTTATTAAGTAAACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","Q79R L122* F156L",3
"lib2","SARS-CoV-2","GTTATTAATCTTAAAG",2,65.19,9.23,-1.6,0.09,1.7,1.13,0,">1 nonsynonymous","F8H Y91L",2
"lib2","SARS-CoV-2","GTTATTACAACTATAA",4,16.53,10.31,-0.53,0.08,2.8,1.01,0,">1 nonsynonymous","R27G F62V T100K",3
"lib2","SARS-CoV-2","GTTATTACCCAGATAA",10,149.78,10.79,-0.05,0.04,3,1.02,0,"1 nonsynonymous","L187H",1
"lib2","SARS-CoV-2","GTTATTACTCTGGAAA",17,239.8,10.85,0.02,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTATTAGGTAATTAC",4,99.41,10.12,-0.71,0.07,2.63,1.03,0,">1 nonsynonymous","T3Q Y35K S41K",3
"lib2","SARS-CoV-2","GTTATTAGGTGAAAAT",5,1.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96F",1
"lib2","SARS-CoV-2","GTTATTAGGTGCATAA",3,0,NA,NA,NA,NA,NA,NA,"stop","R27* L57R",2
"lib2","SARS-CoV-2","GTTATTATAATTCTTC",9,3.24,NA,NA,NA,NA,NA,NA,"stop","E10* Q84V A192V",3
"lib2","SARS-CoV-2","GTTATTATTCCATTGT",5,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F156G T170S",2
"lib2","SARS-CoV-2","GTTATTATTTTCAAAC",1,9.28,10.69,-0.15,0.05,3,1.05,0,">1 nonsynonymous","D97Q K114L",2
"lib2","SARS-CoV-2","GTTATTCAACATGAAA",5,95.71,9.76,-1.08,0.07,2.23,1.02,0,">1 nonsynonymous","K94L P197Q",2
"lib2","SARS-CoV-2","GTTATTCAAGCTCGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","V65Q S129L G155H C195*",4
"lib2","SARS-CoV-2","GTTATTCAATATAGTG",2,2.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E76T",1
"lib2","SARS-CoV-2","GTTATTCATTAAGCAA",4,52.04,9.86,-0.98,0.11,2.36,1,0.01,">1 nonsynonymous","S41Y T55I D90G V115A",4
"lib2","SARS-CoV-2","GTTATTCATTCCCTAT",1,17.87,10.03,-0.81,0.07,2.72,1.07,0,">1 nonsynonymous","S29G V37R N58W N151K",4
"lib2","SARS-CoV-2","GTTATTCCGCACGACC",8,73.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D90I P161L",2
"lib2","SARS-CoV-2","GTTATTCCTATACCGA",6,172.53,8.53,-2.3,0.07,2.94,1.04,0,">1 nonsynonymous","Y143M G155N",2
"lib2","SARS-CoV-2","GTTATTCGAAAAACAA",28,13.48,NA,NA,NA,NA,NA,NA,"stop","T46M P149R G155S Y178*",4
"lib2","SARS-CoV-2","GTTATTCGCGCATTTC",3,56.93,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I28M F99G F167Q",3
"lib2","SARS-CoV-2","GTTATTCTACGTAAAA",8,18.48,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17P K94P R136G T201W",4
"lib2","SARS-CoV-2","GTTATTCTTTCATTCT",5,140.15,10.72,-0.12,0.05,2.93,1.07,0,">1 nonsynonymous","F12L A33F",2
"lib2","SARS-CoV-2","GTTATTGAGGGTACTC",5,60.91,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F62Y D90L P149S C150S",4
"lib2","SARS-CoV-2","GTTATTGAGTCGAAGG",2,24.55,9.74,-1.1,0.09,2.91,1.08,0.01,">1 nonsynonymous","L125V N151Y",2
"lib2","SARS-CoV-2","GTTATTGAGTTAGCTT",10,0.69,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","GTTATTGTATAAATTC",5,111.31,10.7,-0.13,0.03,2.89,1.12,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","GTTATTGTGAGAATAA",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5C S45N R78S",3
"lib2","SARS-CoV-2","GTTATTTACAAGGTCA",3,68.33,8.3,-2.54,0.26,1.5,1.07,0.03,">1 nonsynonymous","Y35V G152M Y178R S184V",4
"lib2","SARS-CoV-2","GTTATTTCCTAAAAAA",6,97.56,9.45,-1.38,0.07,2.62,1.05,0,">1 nonsynonymous","S139K P149S P169H",3
"lib2","SARS-CoV-2","GTTATTTCTCTTGCTA",2,17.29,10.73,-0.1,0.09,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTATTTGGAATCTGC",6,42.5,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","W23K W106G L122C",3
"lib2","SARS-CoV-2","GTTATTTTGTACGAAC",2,11.12,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L5V K56P G86D E141D Y175V F185S",6
"lib2","SARS-CoV-2","GTTCAAAAAACCATGT",8,177.99,10.63,-0.2,0.05,2.9,1.06,0,">1 nonsynonymous","K56T D90L",2
"lib2","SARS-CoV-2","GTTCAAAAACACGAAC",8,15.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15V S53T I88L T100R Y121F S184N",6
"lib2","SARS-CoV-2","GTTCAAAACGCGTAAA",5,49.87,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","N1L K48R D90W A105S Y119P Y143N H189F",7
"lib2","SARS-CoV-2","GTTCAAAAGCACTTGG",1,16.9,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C61S G86I Y119P",3
"lib2","SARS-CoV-2","GTTCAAAATAGCCGCG",6,37.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96R I138S H189L",3
"lib2","SARS-CoV-2","GTTCAAACAACGCTAC",5,19.31,6.61,-4.23,0.77,3,1.14,0.02,">1 nonsynonymous","C6I I72S L95W T170Y",4
"lib2","SARS-CoV-2","GTTCAAACAAGATAGT",10,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29R D98C D137N G152S",4
"lib2","SARS-CoV-2","GTTCAAACATTTAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119G F134M E186A",3
"lib2","SARS-CoV-2","GTTCAAACCGACGATA",1,4.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","GTTCAAACTAAAACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","T15A W23N C61* L95S K132C G155Y G174A",7
"lib2","SARS-CoV-2","GTTCAAATGAACGTAT",1,75.88,8.98,-1.86,0.09,1.68,1.06,0,">1 nonsynonymous","G86A N120Y",2
"lib2","SARS-CoV-2","GTTCAAATTACAAAAA",2,9.48,6,-4.84,2,3,1.07,0,">1 nonsynonymous","T3R F17E V77K P161Y G172R",5
"lib2","SARS-CoV-2","GTTCAACAAAGCCTAA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","P7F S53* N92F E135L",4
"lib2","SARS-CoV-2","GTTCAACAAGGATTCA",1,27.97,10.83,0,0.04,3,1.01,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","GTTCAACATATCCAGG",6,53.69,8.9,-1.94,0.12,1.76,1.12,0.01,">1 nonsynonymous","E10R Y21I S129Y",3
"lib2","SARS-CoV-2","GTTCAACCCTTACATC",3,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63R D90H S108R E141V",4
"lib2","SARS-CoV-2","GTTCAACGACTACGCA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","F8R R16L R25V L95* V103C G152S",6
"lib2","SARS-CoV-2","GTTCAACTGTATCGCC",9,341.48,10.66,-0.17,0.03,2.92,1.07,0,"1 nonsynonymous","N4C",1
"lib2","SARS-CoV-2","GTTCAAGAATACGTTG",14,178.92,10.77,-0.06,0.04,2.93,1.09,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","GTTCAAGAATCCTATA",4,27.55,6,-4.84,1.56,3,1.23,0.01,">1 nonsynonymous","E10T T85N K128F P177F",4
"lib2","SARS-CoV-2","GTTCAAGCCGGATGCG",20,5.02,NA,NA,NA,NA,NA,NA,"stop","I2D C61N K87* Y91T",4
"lib2","SARS-CoV-2","GTTCAAGCGCGATTTG",10,68.79,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T3S N58Y K132P P177V A190E",5
"lib2","SARS-CoV-2","GTTCAAGGAAAATAGG",1,17.02,10.86,0.02,0.03,2.99,1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCAAGGTCTTTTAC",11,95.21,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A42W F167V",2
"lib2","SARS-CoV-2","GTTCAAGGTGCCAGCT",4,2.93,NA,NA,NA,NA,NA,NA,"stop","G9T Y21H C150* H189C",4
"lib2","SARS-CoV-2","GTTCAAGTCTATAATC",3,1.19,NA,NA,NA,NA,NA,NA,"stop","E76* S113Q P149L",3
"lib2","SARS-CoV-2","GTTCAAGTGAATTGTG",1,75.66,10.73,-0.1,0.08,2.88,1.16,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","GTTCAAGTTAGGAACA",2,19.25,9.65,-1.18,0.15,2.15,1.09,0.01,">1 nonsynonymous","L38N E141D",2
"lib2","SARS-CoV-2","GTTCAATACAAGATAA",7,1.1,NA,NA,NA,NA,NA,NA,"stop","P54T T85*",2
"lib2","SARS-CoV-2","GTTCAATACTACATTC",3,82.77,9.48,-1.36,0.07,2.09,1.06,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GTTCAATCCCTCTGAT",4,123.98,10.53,-0.3,0.04,2.93,1.07,0,">1 nonsynonymous","K87H G116R",2
"lib2","SARS-CoV-2","GTTCAATCGAAGACCT",2,14.74,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","T3N N40R G101V",3
"lib2","SARS-CoV-2","GTTCAATGCGGTGGTG",2,13.05,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S29R C158H",2
"lib2","SARS-CoV-2","GTTCAATTATAGTATT",3,21.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N4I S41R Y93H A105S",4
"lib2","SARS-CoV-2","GTTCAATTGCAAAAGT",6,80.65,9,-1.84,0.12,1.71,1.08,0,">1 nonsynonymous","T3C Y39P C61S G152I",4
"lib2","SARS-CoV-2","GTTCAATTTCAAGTGG",14,182.18,9.12,-1.72,0.07,2.2,1.08,0,">1 nonsynonymous","K56N D98I N118Y",3
"lib2","SARS-CoV-2","GTTCACAAATTAGTCG",4,47.26,10.76,-0.07,0.05,3,1.02,0,">1 nonsynonymous","K26R K114A",2
"lib2","SARS-CoV-2","GTTCACAACCCCGATT",4,1.6,NA,NA,NA,NA,NA,NA,"stop","P82* N92Q",2
"lib2","SARS-CoV-2","GTTCACAATGGGAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2P N58I",2
"lib2","SARS-CoV-2","GTTCACACACTCTTAA",3,17.05,6,-4.84,0.65,3,1.1,0,">1 nonsynonymous","R25P T55L C195W",3
"lib2","SARS-CoV-2","GTTCACACCTAAGGGA",1,17.71,10.59,-0.25,0.09,3,1,0,">1 nonsynonymous","T3L E141V",2
"lib2","SARS-CoV-2","GTTCACAGAATGAACC",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Q P96L D112H A190L K198T",5
"lib2","SARS-CoV-2","GTTCACAGCTAACACA",11,131.88,10.45,-0.38,0.05,3,1.01,0,"1 nonsynonymous","F156V",1
"lib2","SARS-CoV-2","GTTCACAGGGTGGCTA",2,13.87,6.63,-4.21,0.37,2.07,1.12,0.02,">1 nonsynonymous","E76F P96R Y119S P191T",4
"lib2","SARS-CoV-2","GTTCACATCCCGTAAT",2,41.48,10.49,-0.35,0.07,2.85,1.11,0,">1 nonsynonymous","A42F N120W",2
"lib2","SARS-CoV-2","GTTCACATGCTATGCG",4,112.51,10.81,-0.03,0.04,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCACATGGTCTCGC",7,1.85,NA,NA,NA,NA,NA,NA,"stop","I2* A18T L122*",3
"lib2","SARS-CoV-2","GTTCACCAGACTAAAC",7,84.09,6.04,-4.8,1.08,1.5,1.19,0.02,">1 nonsynonymous","T55N G101S N107F E141Q H189Q",5
"lib2","SARS-CoV-2","GTTCACCAGACTATCA",12,6.86,10.89,0.06,0.15,2.91,1.03,0,">1 nonsynonymous","R27W V115E Y178F",3
"lib2","SARS-CoV-2","GTTCACCAGCGTATAC",2,0,NA,NA,NA,NA,NA,NA,"stop","D68K K94L F160* T201P",4
"lib2","SARS-CoV-2","GTTCACCATCATCATA",9,97.16,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I72Q R78F T148P",3
"lib2","SARS-CoV-2","GTTCACCGTATTGCGA",3,32.68,10.4,-0.43,0.06,2.92,1,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","GTTCACGGAGAACCAA",3,22.83,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","V11N D90A A105D Y123E G155S",5
"lib2","SARS-CoV-2","GTTCACTCGCCAAGAA",28,353.78,10.81,-0.02,0.04,2.9,1.1,0,">1 nonsynonymous","V37S S147Y",2
"lib2","SARS-CoV-2","GTTCACTCTTGCAGCC",1,4.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y35W Y93L N109L",4
"lib2","SARS-CoV-2","GTTCACTGATTATCCC",3,1.44,NA,NA,NA,NA,NA,NA,"stop","F44R A81* K114M E154N Y175*",5
"lib2","SARS-CoV-2","GTTCAGAAAATCGATG",10,131.72,9.91,-0.93,0.04,2.1,1.09,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","GTTCAGAGGATGAGAC",2,10.73,10.87,0.03,0.09,2.91,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCAGCAGTGATCGT",7,47.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F44V D98E S113V N118M C158A",5
"lib2","SARS-CoV-2","GTTCAGCTATTTAATT",7,22.13,6.49,-4.35,0.54,1.5,1.16,0.03,">1 nonsynonymous","E10A S41E D97G D137L P161D",5
"lib2","SARS-CoV-2","GTTCAGCTGCGAAGGA",12,81.73,10,-0.84,0.07,2.02,1.01,0,">1 nonsynonymous","E10V E76A",2
"lib2","SARS-CoV-2","GTTCAGCTTTCATTTA",1,18.11,9.24,-1.6,0.09,2.47,1.08,0.01,">1 nonsynonymous","Q176R T201M",2
"lib2","SARS-CoV-2","GTTCAGGGACATCAAC",2,24.46,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","D90T Y93S T100P T148P P169L Q176A",6
"lib2","SARS-CoV-2","GTTCAGGTACAGAAAC",1,59.42,10.12,-0.72,0.04,2.99,1,0,">1 nonsynonymous","T3H F156Q",2
"lib2","SARS-CoV-2","GTTCAGTAAAACTAAA",1,23.9,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G74C Q79M G101V V180L",4
"lib2","SARS-CoV-2","GTTCAGTGTTCAATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S36C K48G G146*",3
"lib2","SARS-CoV-2","GTTCATAAATTTATAT",2,7.03,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","C61R Y93S",2
"lib2","SARS-CoV-2","GTTCATAACAGCATAC",12,100.01,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33S G86P",2
"lib2","SARS-CoV-2","GTTCATAACGAATGAT",4,25.44,6.31,-4.52,0.63,1.5,1.01,0,">1 nonsynonymous","P7I P54V P82L R136A",4
"lib2","SARS-CoV-2","GTTCATAATTCGTGAT",3,65.27,9.75,-1.08,0.03,2.93,1.07,0,">1 nonsynonymous","P54N A145K V153K",3
"lib2","SARS-CoV-2","GTTCATACTCAAGCTG",5,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60F D90R T100P",3
"lib2","SARS-CoV-2","GTTCATAGTAAAAATT",18,311.52,10.6,-0.23,0.03,2.93,1.06,0,">1 nonsynonymous","S36T A81S",2
"lib2","SARS-CoV-2","GTTCATAGTGCATAAG",5,14,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17V C61K R136G",3
"lib2","SARS-CoV-2","GTTCATATTACGCCTA",2,14.39,9.62,-1.22,0.14,1.88,1.12,0.01,">1 nonsynonymous","L60V W106L",2
"lib2","SARS-CoV-2","GTTCATATTTGTACAA",9,48.55,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y91F F99T Y165K T201K",4
"lib2","SARS-CoV-2","GTTCATCATTATACAC",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M I142Q V173N",3
"lib2","SARS-CoV-2","GTTCATCCCATCCACT",5,113.81,10.43,-0.4,0.04,2.96,1.07,0,">1 nonsynonymous","Y39L D59L R78P L122I",4
"lib2","SARS-CoV-2","GTTCATGAAAATTTAA",13,50.59,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V20W P149G",2
"lib2","SARS-CoV-2","GTTCATGAATACCGAA",8,115.81,10.76,-0.08,0.03,2.92,1.09,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","GTTCATGATATTTTCA",2,32.11,10.73,-0.11,0.04,2.97,1.04,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","GTTCATGCTACGTCCT",4,5.03,NA,NA,NA,NA,NA,NA,"stop","F8D R27* G83I K128G",4
"lib2","SARS-CoV-2","GTTCATTAAGATTTAG",3,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T Y35M W106H G172W",4
"lib2","SARS-CoV-2","GTTCATTCCTAAACAT",21,281.73,10.83,0,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCATTTATGCTTTG",5,14.18,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","C6Q N92K D97F S164P Y178N",5
"lib2","SARS-CoV-2","GTTCATTTCCATAATT",7,106.5,10.22,-0.61,0.02,2.95,1.06,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","GTTCCAAAACCAAAAA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","F44* T63A N157L",3
"lib2","SARS-CoV-2","GTTCCAAAATCCACGA",1,42.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S43Y K48I K56A N92P N110R Y175W",6
"lib2","SARS-CoV-2","GTTCCAAAATTCGCGT",5,50.56,6.37,-4.47,0.78,1.5,1.16,0.04,">1 nonsynonymous","P7R E141M F167R A190T",4
"lib2","SARS-CoV-2","GTTCCAAAGGTGTTCC",9,162.84,9.34,-1.5,0.08,2.18,1.06,0,">1 nonsynonymous","N107S I142T",2
"lib2","SARS-CoV-2","GTTCCAAATCATAGAC",4,55.12,10.02,-0.81,0.09,2.49,1.07,0,">1 nonsynonymous","I2L N40I T55F",3
"lib2","SARS-CoV-2","GTTCCAACAAACGGGC",5,54.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I28Y V37L R73F G117N",4
"lib2","SARS-CoV-2","GTTCCAACAAGAACCC",7,210.91,10.16,-0.68,0.02,2.93,1.04,0,">1 nonsynonymous","K132I G174T P197S",3
"lib2","SARS-CoV-2","GTTCCAATAGTGACAA",5,31.47,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","A42H F167G",2
"lib2","SARS-CoV-2","GTTCCAATCTGTGAGC",2,19.28,10.61,-0.23,0.07,2.77,1.24,0,">1 nonsynonymous","Y35G L187G",2
"lib2","SARS-CoV-2","GTTCCAATGAACTAAT",8,70.7,10.3,-0.54,0.07,2.83,1,0,">1 nonsynonymous","T85Y E141I",2
"lib2","SARS-CoV-2","GTTCCACAACTTTCCC",1,11.41,10.54,-0.29,0.06,2.97,1.02,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","GTTCCACAATGCCGTG",5,203.38,10.51,-0.32,0.06,2.94,1.07,0,">1 nonsynonymous","K87T T148F",2
"lib2","SARS-CoV-2","GTTCCACAGAGAACTA",3,19.22,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","C6W R25C Q144I",3
"lib2","SARS-CoV-2","GTTCCACGATCTAGAC",4,26.08,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L5P E10A V20H V37N G74S E141P N157W G196D",8
"lib2","SARS-CoV-2","GTTCCACGCAAAGCAT",5,64.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R S43E S53R T100C",4
"lib2","SARS-CoV-2","GTTCCAGAAATTACAC",16,82.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71Q V103F",2
"lib2","SARS-CoV-2","GTTCCAGATAACCACC",1,16.07,10.02,-0.81,0.14,2.79,1,0.01,">1 nonsynonymous","T15R S184L",2
"lib2","SARS-CoV-2","GTTCCAGCTATAAAAA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V I88R L183C",3
"lib2","SARS-CoV-2","GTTCCATAAACCAATT",3,56.69,10.34,-0.5,0.03,2.88,1.08,0,">1 nonsynonymous","F70M D98N K198R",3
"lib2","SARS-CoV-2","GTTCCATAGACAATAG",1,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55C A89H L122M Q168M",4
"lib2","SARS-CoV-2","GTTCCATCAACAAGAT",2,52.47,9.88,-0.96,0.15,2.08,1.1,0.01,">1 nonsynonymous","N1K K56T A67Y S184Y",4
"lib2","SARS-CoV-2","GTTCCATCAATTTAAT",14,48.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V103S N120M P149H",3
"lib2","SARS-CoV-2","GTTCCATGACAATTCA",8,241.04,10.22,-0.62,0.05,2.76,1,0,"1 nonsynonymous","Y93F",1
"lib2","SARS-CoV-2","GTTCCATGAGAACTCA",4,2.98,NA,NA,NA,NA,NA,NA,"stop","L60V A81C D90* F99I",4
"lib2","SARS-CoV-2","GTTCCATTAGCATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","L131* Q144* T201S",3
"lib2","SARS-CoV-2","GTTCCCAAGTACAGGA",1,91.54,8.35,-2.49,0.18,2.09,1.05,0.01,">1 nonsynonymous","N4F Q176E",2
"lib2","SARS-CoV-2","GTTCCCAATCCACCAA",1,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39K G51L R73H G101I R127I Y143G Y165G",7
"lib2","SARS-CoV-2","GTTCCCACTAACTTCG",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37C E135C S164L",3
"lib2","SARS-CoV-2","GTTCCCATGTATTATT",3,6.61,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","N4D G101L N107L",3
"lib2","SARS-CoV-2","GTTCCCGACAAGAACA",1,26.88,10.16,-0.67,0.04,2.91,1.09,0,">1 nonsynonymous","R16K A42F K87M P149L",4
"lib2","SARS-CoV-2","GTTCCCGGCACGGACA",8,158.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55K L60Q V77E P161F Y175F",5
"lib2","SARS-CoV-2","GTTCCCTAACGGCGCC",2,61.71,10.93,0.09,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCCCTATTGGAGAT",22,237.4,10.77,-0.06,0.03,2.97,1.02,0,">1 nonsynonymous","Y123M S200H",2
"lib2","SARS-CoV-2","GTTCCCTCGCAACCAT",2,47.89,10.6,-0.24,0.03,2.91,1.1,0,"1 nonsynonymous","D98W",1
"lib2","SARS-CoV-2","GTTCCCTTGGAGAAAT",2,20.4,8.76,-2.07,0.08,2.96,1,0,">1 nonsynonymous","Y119Q G155S V173A T201D",4
"lib2","SARS-CoV-2","GTTCCGAAACATTTTA",3,52.9,8.52,-2.32,0.13,1.5,1.07,0.01,">1 nonsynonymous","S36I N107V",2
"lib2","SARS-CoV-2","GTTCCGAATTAAAGAG",6,123.63,8.51,-2.32,0.07,2.79,1.08,0,">1 nonsynonymous","G9W N64L S139A T170E",4
"lib2","SARS-CoV-2","GTTCCGAGAACATAGT",19,306.22,10.16,-0.68,0.06,2.46,1.06,0,">1 nonsynonymous","V77R T201R",2
"lib2","SARS-CoV-2","GTTCCGATCCCAACTT",6,109.11,10.27,-0.57,0.04,2.88,1.01,0,">1 nonsynonymous","K132Q Y178S",2
"lib2","SARS-CoV-2","GTTCCGCCCGAGCCAA",4,48.61,10.77,-0.06,0.06,2.88,1.11,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","GTTCCGCGTTTATTAT",5,42.06,6,-4.84,1.47,1.5,1.13,0.02,">1 nonsynonymous","I2N G83L A105F Y119M",4
"lib2","SARS-CoV-2","GTTCCGCTGTATTAAC",3,14.21,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","Y50N Q84S S139I",3
"lib2","SARS-CoV-2","GTTCCGGCCAAAACAG",6,51.51,6,-4.84,2,3,1.17,0.01,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","GTTCCGGTCCAAAAAG",11,46.7,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y91D N157T",2
"lib2","SARS-CoV-2","GTTCCGTACGGCCAGT",10,108.62,9.88,-0.96,0.06,2.58,1.08,0,">1 nonsynonymous","C6V R73K",2
"lib2","SARS-CoV-2","GTTCCGTATCCCATCT",2,17.51,10.17,-0.67,0.14,2.6,1.04,0.01,">1 nonsynonymous","V37L L57C",2
"lib2","SARS-CoV-2","GTTCCGTCTATTGATT",6,108.48,10.64,-0.19,0.04,2.96,1.05,0,"1 nonsynonymous","G174A",1
"lib2","SARS-CoV-2","GTTCCTAAAGTAAAAG",2,29.09,6,-4.84,0.33,3,1.07,0,">1 nonsynonymous","G86L G116N",2
"lib2","SARS-CoV-2","GTTCCTAAATAGGAGT",5,103.71,6.14,-4.69,0.72,1.5,1.21,0.01,">1 nonsynonymous","F12R F47T D59R G83D V173S P197H",6
"lib2","SARS-CoV-2","GTTCCTACATATCACT",1,6.38,10.84,0.01,0.09,2.86,1,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","GTTCCTAGCCCGGATT",6,79.76,9.13,-1.71,0.06,2.12,1.08,0,">1 nonsynonymous","K94G T170S",2
"lib2","SARS-CoV-2","GTTCCTAGTGCAGTTA",7,89.26,9.45,-1.39,0.07,1.88,1.03,0,"1 nonsynonymous","D68T",1
"lib2","SARS-CoV-2","GTTCCTATCTCGCCGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C31A",1
"lib2","SARS-CoV-2","GTTCCTCAAACCTCTA",1,8.24,10.56,-0.28,0.09,2.78,1.24,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","GTTCCTCATATATGCA",3,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q N107D G116A",3
"lib2","SARS-CoV-2","GTTCCTCCTCACCATT",1,70.39,9.79,-1.04,0.1,2.41,1.09,0,">1 nonsynonymous","L57C P149G",2
"lib2","SARS-CoV-2","GTTCCTTCCTGTCAAA",5,31.05,10.47,-0.37,0.07,2.85,1.18,0,">1 nonsynonymous","T3F K87L",2
"lib2","SARS-CoV-2","GTTCCTTCTCATGCGA",13,55.05,8.77,-2.07,0.34,1.5,1,0.05,">1 nonsynonymous","T3N E10G N92G",3
"lib2","SARS-CoV-2","GTTCGAAAAGACTACT",4,94.91,10.34,-0.5,0.03,2.9,1.05,0,">1 nonsynonymous","V37L A89V",2
"lib2","SARS-CoV-2","GTTCGAAAATCCATAA",10,119.71,8.15,-2.69,0.11,1.8,1.11,0,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","GTTCGAAATACCTATT",4,31.53,9.81,-1.03,0.13,2.69,1.08,0.01,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","GTTCGAAATAGGAAAT",15,126.76,9.79,-1.05,0.09,2.09,1.09,0,">1 nonsynonymous","N30E T85L H189Y",3
"lib2","SARS-CoV-2","GTTCGAAATTATCCAA",8,180.97,10.17,-0.66,0.05,2.75,1.05,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","GTTCGAACACTAACAC",1,24.62,10.21,-0.62,0.1,2.66,1.15,0,">1 nonsynonymous","P7L D98Y P197A",3
"lib2","SARS-CoV-2","GTTCGAAGATCCAACC",2,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10F R16M A42Q F126T G146V",5
"lib2","SARS-CoV-2","GTTCGAAGCCAAGATA",13,0.61,NA,NA,NA,NA,NA,NA,"stop","F12L V37* W106R P177L",4
"lib2","SARS-CoV-2","GTTCGAATAAATCCTA",2,9.53,6.02,-4.82,0.75,1.5,1.01,0.01,">1 nonsynonymous","I72K N157S",2
"lib2","SARS-CoV-2","GTTCGAATATGATCCA",2,33.68,9.13,-1.7,0.11,1.83,1,0.01,">1 nonsynonymous","G9P A33L V77L Q144F",4
"lib2","SARS-CoV-2","GTTCGAATGTCGAGGC",2,3.45,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","GTTCGAATTTTGCAGA",7,51.01,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","K48T K56N A67D K94A",4
"lib2","SARS-CoV-2","GTTCGACATCATACGG",3,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94H A105L I142Y",3
"lib2","SARS-CoV-2","GTTCGAGGAACACGAA",4,20.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G51Y G117L R127L F134L L183Q T201S",6
"lib2","SARS-CoV-2","GTTCGAGTTAATGTAA",1,30.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37E W106Q K114R V173T T201L",5
"lib2","SARS-CoV-2","GTTCGATACAACTATG",4,117.41,10.15,-0.68,0.03,2.72,1.08,0,"1 nonsynonymous","Q79T",1
"lib2","SARS-CoV-2","GTTCGCAACCAGAAGG",9,27.86,8.05,-2.79,0.34,1.5,1.07,0.04,">1 nonsynonymous","F8A D68V A145N A192D",4
"lib2","SARS-CoV-2","GTTCGCACAACTCGTT",11,69.68,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","G86P V103W P177Q F185L",4
"lib2","SARS-CoV-2","GTTCGCCAATGATACA",1,23.67,10.64,-0.19,0.06,2.95,1.02,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","GTTCGCGACAAATATG",6,152.24,10.36,-0.47,0.04,2.97,1.04,0,">1 nonsynonymous","K56V P191R",2
"lib2","SARS-CoV-2","GTTCGCTAACAAGACG",2,0.56,NA,NA,NA,NA,NA,NA,"stop","V77* D98K",2
"lib2","SARS-CoV-2","GTTCGCTAGCTAGAAT",3,14.91,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","K56I E76G N107Y",3
"lib2","SARS-CoV-2","GTTCGCTCGATATCCA",4,19.05,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","L38F F47T S69R D98E A105L K128R",6
"lib2","SARS-CoV-2","GTTCGCTGGAGTGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F134D Y143T F156*",3
"lib2","SARS-CoV-2","GTTCGCTTGACTTAGG",4,122.09,10.52,-0.32,0.04,2.96,1.02,0,">1 nonsynonymous","T46H T85N Q144T",3
"lib2","SARS-CoV-2","GTTCGGAAACTCGGTC",1,12.9,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","D68E Q176L P197L",3
"lib2","SARS-CoV-2","GTTCGGCGGCAAAGGG",2,20.33,9.56,-1.27,0.21,1.74,1.13,0.01,">1 nonsynonymous","Y21N D97Y E141H",3
"lib2","SARS-CoV-2","GTTCGGTAACACCCTT",5,89.61,10.75,-0.08,0.03,2.94,1.06,0,">1 nonsynonymous","P7H P197L",2
"lib2","SARS-CoV-2","GTTCGGTGCCACCTCG",10,79.75,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9R V32R R179N",3
"lib2","SARS-CoV-2","GTTCGGTGTGTAAATC",3,10.82,7.3,-3.53,0.34,1.5,1,0.04,">1 nonsynonymous","S43D L60T A81F Q144R",4
"lib2","SARS-CoV-2","GTTCGTAAAATTTTGA",11,51.97,8.12,-2.71,0.26,1.5,1.06,0.03,">1 nonsynonymous","C6N F99L Q163K",3
"lib2","SARS-CoV-2","GTTCGTAAAGAACGTT",10,117.58,10.71,-0.13,0.03,2.88,1.1,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","GTTCGTAACATCTACG",1,1.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","GTTCGTACCGCTCTAG",2,63.36,9.98,-0.86,0.09,2.15,1.06,0,">1 nonsynonymous","E141F F185V",2
"lib2","SARS-CoV-2","GTTCGTATGCCGATAA",1,9.21,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T55L Y91E V181T",3
"lib2","SARS-CoV-2","GTTCGTATTTATATAA",5,66,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","T85S G101Q",2
"lib2","SARS-CoV-2","GTTCGTCTGGATTTAG",9,159.3,10.75,-0.08,0.04,2.89,1.12,0,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","GTTCGTCTTAATCAGC",1,7.11,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K128A C150I N157Y T170K",4
"lib2","SARS-CoV-2","GTTCGTGCATTATCAT",2,45.89,10.86,0.02,0.04,2.97,1.05,0,">1 nonsynonymous","N130S K199H",2
"lib2","SARS-CoV-2","GTTCGTGGCTCGCTTA",2,39.53,10.37,-0.46,0.06,2.89,1.14,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","GTTCTAAAAGGTCAGA",2,41.31,9.14,-1.7,0.23,1.62,1.14,0.02,">1 nonsynonymous","K94G E141V",2
"lib2","SARS-CoV-2","GTTCTAACCGCCATGA",6,41.95,7.67,-3.17,0.24,1.5,1.1,0.02,">1 nonsynonymous","F47L K132M F185P",3
"lib2","SARS-CoV-2","GTTCTAACCGCCCCGA",2,11.72,9.56,-1.28,0.11,3,1.07,0,">1 nonsynonymous","L5R I142K",2
"lib2","SARS-CoV-2","GTTCTAACTCCAAGGA",25,113.57,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N40H Q84R F99D",3
"lib2","SARS-CoV-2","GTTCTAATCAAAGACA",4,27.58,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","S19V R124Y G166D",3
"lib2","SARS-CoV-2","GTTCTACAAGGTCAAT",1,42.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5V A14K Y35V A81T D112L N118R P177L",7
"lib2","SARS-CoV-2","GTTCTACAAGTCTAGT",4,39.89,10.77,-0.07,0.05,2.9,1.06,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","GTTCTACTTAGGGCCG",3,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L F160S P169L",3
"lib2","SARS-CoV-2","GTTCTACTTTAGATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N30* P96E N107R V173I",4
"lib2","SARS-CoV-2","GTTCTAGAGACTACTT",7,2.65,NA,NA,NA,NA,NA,NA,"stop","L38T G74P L122* K199M",4
"lib2","SARS-CoV-2","GTTCTAGCGTACTCTA",9,35.54,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","L57D K94L",2
"lib2","SARS-CoV-2","GTTCTAGCTGCGACGC",3,0,NA,NA,NA,NA,NA,NA,"stop","C31V D112* N120R S139G",4
"lib2","SARS-CoV-2","GTTCTAGGTTAACTGA",3,67.82,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14Y L38A L111P G116V Y119A G196C",6
"lib2","SARS-CoV-2","GTTCTATAAACACATC",2,16.96,7.72,-3.12,0.22,1.5,1.11,0.02,">1 nonsynonymous","E10S P82M",2
"lib2","SARS-CoV-2","GTTCTATAATACAGAA",6,47.75,6.04,-4.8,1.53,1.5,1.33,0.04,">1 nonsynonymous","V103Y V173S H189R",3
"lib2","SARS-CoV-2","GTTCTATATGAGAAAT",5,21.93,6,-4.84,0.67,2.59,1.08,0.01,">1 nonsynonymous","K94Q Y123W P133C S200Y",4
"lib2","SARS-CoV-2","GTTCTATCTGGTATAT",13,113.55,6.95,-3.89,0.29,1.5,1.1,0.02,">1 nonsynonymous","S41L N120S Y165A",3
"lib2","SARS-CoV-2","GTTCTATGATAAACAC",8,29.07,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F70L L95H S147L T201P",4
"lib2","SARS-CoV-2","GTTCTCAAGTAAAATG",2,65.43,10.24,-0.6,0.05,2.97,1.04,0,">1 nonsynonymous","L5E F62L P149S G174L",4
"lib2","SARS-CoV-2","GTTCTCACAATTGGGT",1,127.23,10.74,-0.1,0.04,2.97,1.05,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","GTTCTCACAGCTAAAA",9,21.58,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I28P D97Q",2
"lib2","SARS-CoV-2","GTTCTCACGTTTAACC",9,6.91,NA,NA,NA,NA,NA,NA,"stop","K26S K87S K94* N107V V153Y T201L",6
"lib2","SARS-CoV-2","GTTCTCATCAGATTTC",10,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90R L122A",2
"lib2","SARS-CoV-2","GTTCTCCTATAATGCA",9,150.89,6,-4.84,1.52,1.5,1.16,0,">1 nonsynonymous","N40K S69V R124C N151F",4
"lib2","SARS-CoV-2","GTTCTCGAACAGCAGT",6,7.75,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6L C49L K87S E186F",4
"lib2","SARS-CoV-2","GTTCTCTATAGAGCAT",3,72.12,10.86,0.02,0.07,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCTCTGAAAGTCGG",2,7.03,8.56,-2.27,0.25,2.18,1,0.02,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","GTTCTGAAAATAAACG",6,2.01,NA,NA,NA,NA,NA,NA,"stop","L38T T100* N107C",3
"lib2","SARS-CoV-2","GTTCTGAAGTAGACAC",6,151.3,7.53,-3.31,0.33,1.5,1.22,0.03,"1 nonsynonymous","Y159D",1
"lib2","SARS-CoV-2","GTTCTGAGTAAATTCG",4,30.42,9.42,-1.42,0.1,2.59,1.09,0,">1 nonsynonymous","C6I K87W",2
"lib2","SARS-CoV-2","GTTCTGCAAAAAGGAA",5,74.27,10.67,-0.17,0.05,2.88,1.1,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","GTTCTGCAATGCGGTA",8,169.05,10.58,-0.26,0.06,2.93,1.05,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","GTTCTGCAGTACACAT",2,28.95,10.26,-0.58,0.05,2.85,1.09,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","GTTCTGCCCAAAACCT",20,318.01,10.83,0,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTCTGCCCAGGAAAG",4,61.96,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L5N L38F C158T",3
"lib2","SARS-CoV-2","GTTCTGCGGACCTTCG",2,111.38,10.81,-0.03,0.05,2.94,1.08,0,"1 nonsynonymous","K132S",1
"lib2","SARS-CoV-2","GTTCTGGAGTAAAGGC",3,11.08,8.95,-1.89,0.46,1.52,1.1,0.05,">1 nonsynonymous","N4V D90Y N118Y",3
"lib2","SARS-CoV-2","GTTCTGGCTGTACAAG",4,90.05,10.55,-0.28,0.06,2.98,1.03,0,">1 nonsynonymous","G9V K199N",2
"lib2","SARS-CoV-2","GTTCTGGGTGGAGATT",4,147.05,8.6,-2.24,0.1,2.65,1.04,0,">1 nonsynonymous","K26M T63A Y143T",3
"lib2","SARS-CoV-2","GTTCTGGTTAGTAGTG",5,8.6,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","T85I I104K N120D",3
"lib2","SARS-CoV-2","GTTCTGGTTGCCGAAT",1,6.01,9.14,-1.7,0.9,1.52,1.2,0.04,">1 nonsynonymous","K48S S113R",2
"lib2","SARS-CoV-2","GTTCTGTATCGTATTT",3,47.26,10.16,-0.67,0.03,2.92,1.07,0,">1 nonsynonymous","L5E K56W K132S",3
"lib2","SARS-CoV-2","GTTCTGTCTACCCCAG",4,64.39,10.5,-0.34,0.06,2.77,1.17,0,">1 nonsynonymous","A14E A42H",2
"lib2","SARS-CoV-2","GTTCTGTTTAGGCTTA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","L122K Q144* T201V",3
"lib2","SARS-CoV-2","GTTCTTAGGGTACTCG",1,8.62,9.58,-1.25,0.48,1.5,1,0.08,">1 nonsynonymous","Q84F F99L",2
"lib2","SARS-CoV-2","GTTCTTCATAACCATG",4,101.33,10.85,0.01,0.06,2.94,1.1,0,"1 nonsynonymous","K199Y",1
"lib2","SARS-CoV-2","GTTCTTCATTATAAGC",5,55.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R127S F167S",2
"lib2","SARS-CoV-2","GTTCTTCCACTCTATA",4,40.61,8.49,-2.35,0.1,2.59,1.05,0.01,">1 nonsynonymous","T55F G117Y E141R",3
"lib2","SARS-CoV-2","GTTCTTCGCATAAATA",6,113.89,10.26,-0.58,0.04,2.95,1.07,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","GTTCTTTAACCTAATG",2,8.5,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W106L R127L",2
"lib2","SARS-CoV-2","GTTCTTTGAGCACCGG",19,103.88,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A67N Y91P",2
"lib2","SARS-CoV-2","GTTCTTTGTAATCACC",3,39.65,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F17E D98F",2
"lib2","SARS-CoV-2","GTTCTTTTACCCGCCT",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I F99K K128E",3
"lib2","SARS-CoV-2","GTTCTTTTCACACCTA",5,103.94,8.69,-2.15,0.07,2.9,1.09,0,">1 nonsynonymous","G9M T55G G117D",3
"lib2","SARS-CoV-2","GTTGAAAAATTAACAA",5,51.31,10.32,-0.51,0.08,2.38,1.02,0,">1 nonsynonymous","L60M W106S",2
"lib2","SARS-CoV-2","GTTGAAAACTGCAAAA",3,40.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F126L L131R",2
"lib2","SARS-CoV-2","GTTGAAAATTATCTAG",2,69.84,10.12,-0.71,0.05,2.85,1.03,0,">1 nonsynonymous","C61N A105V T201M",3
"lib2","SARS-CoV-2","GTTGAAACGGCACACG",2,2.34,NA,NA,NA,NA,NA,NA,"stop","F47N C61F G155S Y175*",4
"lib2","SARS-CoV-2","GTTGAAAGGTCCTGTC",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62T I72Q",2
"lib2","SARS-CoV-2","GTTGAAATGAACATCC",6,47.55,7.04,-3.8,0.34,1.5,1.08,0.03,">1 nonsynonymous","A89D N151S",2
"lib2","SARS-CoV-2","GTTGAAATTTCGCCAG",4,21.33,6.1,-4.74,1.11,1.5,1.11,0.03,">1 nonsynonymous","F99N A105M I142S",3
"lib2","SARS-CoV-2","GTTGAACAAGTGGAGG",5,68.87,10.79,-0.05,0.04,2.98,1.03,0,"1 nonsynonymous","V32L",1
"lib2","SARS-CoV-2","GTTGAACAATACTTAC",5,163.94,10.68,-0.15,0.03,2.93,1.07,0,">1 nonsynonymous","L60H K114E",2
"lib2","SARS-CoV-2","GTTGAACACTAGTTCA",7,89.22,10.62,-0.22,0.04,2.92,1.05,0,"1 nonsynonymous","G152F",1
"lib2","SARS-CoV-2","GTTGAACATAAAGATG",10,275.08,8.98,-1.86,0.05,2.8,1.08,0,">1 nonsynonymous","V37I Q84R G116P T170R",4
"lib2","SARS-CoV-2","GTTGAACATAACTGTT",10,55.56,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","C49V K114L Y119S R179G",4
"lib2","SARS-CoV-2","GTTGAACATGCACTGC",9,46.39,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S69M I88G I104D S164L",4
"lib2","SARS-CoV-2","GTTGAACCCAAAACCC",5,4.08,NA,NA,NA,NA,NA,NA,"stop","C6S D59* T201R",3
"lib2","SARS-CoV-2","GTTGAACCTTGGCCGC",12,135.57,8.39,-2.45,0.1,2.32,1.13,0,">1 nonsynonymous","S139I A145E Q168R",3
"lib2","SARS-CoV-2","GTTGAACTAGGTCATT",18,195.6,9.13,-1.71,0.07,2.01,1.11,0,">1 nonsynonymous","P82K K87M",2
"lib2","SARS-CoV-2","GTTGAACTTGCTCGAA",17,156.17,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N92W W106F Y121S G172E",4
"lib2","SARS-CoV-2","GTTGAACTTTTCTAGG",2,1.41,NA,NA,NA,NA,NA,NA,"stop","A81* A105Q R136V C150Y L183I",5
"lib2","SARS-CoV-2","GTTGAAGAGTTTTAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","L95T P133* E141T",3
"lib2","SARS-CoV-2","GTTGAAGCCATGACGA",1,5.83,10.97,0.14,0.06,3,1,0,">1 nonsynonymous","L60K V173F",2
"lib2","SARS-CoV-2","GTTGAAGCGGGTAGTA",4,98.89,8.43,-2.4,0.1,2.99,1.04,0,">1 nonsynonymous","Q84K T100M N157K",3
"lib2","SARS-CoV-2","GTTGAATAAAGGCTGA",13,93.35,10.91,0.07,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGAATACCATGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y178*",1
"lib2","SARS-CoV-2","GTTGAATAGTTAGACA",14,180.49,10.61,-0.22,0.03,2.91,1.06,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","GTTGAATATATTCTTT",6,71.65,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P133A P161R",2
"lib2","SARS-CoV-2","GTTGAATATTTTTACG",2,7.55,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C6Y V77M K94E I138N",4
"lib2","SARS-CoV-2","GTTGAATTCTAGTAAT",2,33.99,9.75,-1.09,0.08,2.06,1.02,0,">1 nonsynonymous","N13L G51H",2
"lib2","SARS-CoV-2","GTTGACAAACCCCAAG",1,47.06,10.31,-0.53,0.05,2.83,1.02,0,">1 nonsynonymous","N4F C61L",2
"lib2","SARS-CoV-2","GTTGACATAACGACTT",2,28.42,6.71,-4.13,0.5,1.5,1.08,0.04,">1 nonsynonymous","S36I N58K G86S V181S",4
"lib2","SARS-CoV-2","GTTGACATGTCTACCT",12,252.46,10.57,-0.26,0.02,2.9,1.06,0,">1 nonsynonymous","C61F G146S",2
"lib2","SARS-CoV-2","GTTGACCAGGGTAGAA",4,67.4,10.68,-0.16,0.06,2.87,1.08,0,">1 nonsynonymous","A42D S53F",2
"lib2","SARS-CoV-2","GTTGACCAGGTCACAG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45Y E76Q",2
"lib2","SARS-CoV-2","GTTGACCATGGACCTC",5,60.58,10.1,-0.73,0.05,2.68,1.07,0,">1 nonsynonymous","F8R T15L",2
"lib2","SARS-CoV-2","GTTGACCCCGTGGAAA",2,17.07,6,-4.84,2,3,1.06,0,">1 nonsynonymous","S41K A105W Y123M P161D",4
"lib2","SARS-CoV-2","GTTGACCGTACCTTCA",2,94.52,10.53,-0.31,0.06,2.92,1.07,0,">1 nonsynonymous","A14S K48Q S129D",3
"lib2","SARS-CoV-2","GTTGACCTTTTTACAA",8,44.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15K G86V",2
"lib2","SARS-CoV-2","GTTGACGAACCACAAG",7,77.31,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F8Y R27T Y39G I104D F134T",5
"lib2","SARS-CoV-2","GTTGACGCGGCCGAAA",1,23.57,10.22,-0.62,0.1,2.85,1.01,0,">1 nonsynonymous","R27V F44S L60V",3
"lib2","SARS-CoV-2","GTTGACTGAGCTATCA",9,62.99,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F8L V37W Y93H F156C",4
"lib2","SARS-CoV-2","GTTGAGAAATCGAGTT",2,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N T100S",2
"lib2","SARS-CoV-2","GTTGAGAGGAAATCTA",15,306.52,8.35,-2.48,0.09,2.39,1.1,0,">1 nonsynonymous","K132Q T170R V173R Q176M",4
"lib2","SARS-CoV-2","GTTGAGAGGTCTGAAA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25Q V103I T201G",3
"lib2","SARS-CoV-2","GTTGAGATACAGATTA",1,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S D137L T170V",3
"lib2","SARS-CoV-2","GTTGAGATATGTTAAA",2,8.88,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N64I D90M P96W N130D N151T",5
"lib2","SARS-CoV-2","GTTGAGATTATGGTAA",1,24.42,10.09,-0.75,0.12,2.6,1,0,">1 nonsynonymous","R16V V37F F70L",3
"lib2","SARS-CoV-2","GTTGAGGCCTATCAAT",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32S T85R",2
"lib2","SARS-CoV-2","GTTGAGGCTTCACAAC",9,122.65,7.76,-3.08,0.27,1.5,1.07,0.02,">1 nonsynonymous","A22T V37G P161T",3
"lib2","SARS-CoV-2","GTTGAGGTCAAATAAC",11,238.35,10.84,0,0.04,2.93,1.08,0,">1 nonsynonymous","T3G T201N",2
"lib2","SARS-CoV-2","GTTGAGTATTAGGAAC",1,20.18,9.35,-1.49,0.08,2.84,1.16,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","GTTGAGTCCGTAAAAA",3,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18I S53Y Y143V L183T",4
"lib2","SARS-CoV-2","GTTGAGTTGATTTCGA",3,10.8,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P7G R25F S129Y",3
"lib2","SARS-CoV-2","GTTGATAACTTGGATC",16,90.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36Y N92R Y159S",3
"lib2","SARS-CoV-2","GTTGATACAACGATTT",1,141.61,9.29,-1.55,0.07,2.87,1.09,0,">1 nonsynonymous","G117S E154I",2
"lib2","SARS-CoV-2","GTTGATACACAAGTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","F70* G83I T148L",3
"lib2","SARS-CoV-2","GTTGATACCCAAAGAG",3,60.48,10.89,0.06,0.06,2.93,1.08,0,"1 nonsynonymous","S53T",1
"lib2","SARS-CoV-2","GTTGATAGGTGATTAT",9,105.49,10.75,-0.08,0.04,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGATATGTTTTGCC",23,392.43,10.82,-0.02,0.05,2.86,1.1,0,">1 nonsynonymous","N24T L122N",2
"lib2","SARS-CoV-2","GTTGATCAAGTGCCAA",3,31.23,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85F T100R S113E T170F",4
"lib2","SARS-CoV-2","GTTGATCCCAGATACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E Y39V V77F C158K",4
"lib2","SARS-CoV-2","GTTGATCCTCTTGTTA",8,94.68,10.27,-0.57,0.02,2.93,1,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","GTTGATCGTAGACTCA",1,11.26,10.79,-0.05,0.04,2.95,1.08,0,"1 nonsynonymous","R16N",1
"lib2","SARS-CoV-2","GTTGATGACAGTGTCA",2,74.96,10.44,-0.39,0.06,2.85,1.06,0,">1 nonsynonymous","T3R P96G",2
"lib2","SARS-CoV-2","GTTGATGATCCACCCA",13,259.57,10.68,-0.16,0.03,2.88,1.09,0,">1 nonsynonymous","S129A S139R",2
"lib2","SARS-CoV-2","GTTGATGCATGCACTT",3,0,NA,NA,NA,NA,NA,NA,"stop","A14H I28L Y35* N58W Y93* K114V",6
"lib2","SARS-CoV-2","GTTGATGCCAAATACT",11,40.08,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","S45K L57P A81D T85P W106V",5
"lib2","SARS-CoV-2","GTTGATGCTAGTAAGA",3,58.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L57R S69W E154I P169S",4
"lib2","SARS-CoV-2","GTTGATGGCTGACTAC",1,14.78,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","P7F N64I V103G V115N R136P",5
"lib2","SARS-CoV-2","GTTGATGTAGTTTGTC",5,19.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K W23S S36L P82H L131G V173S",6
"lib2","SARS-CoV-2","GTTGATGTCAGACTTT",2,9.53,8.49,-2.34,0.64,1.58,1.12,0.07,">1 nonsynonymous","N58P K87F Y93K P133R",4
"lib2","SARS-CoV-2","GTTGATGTCCAAAACC",1,23.67,10.81,-0.02,0.14,2.48,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTTGATTAACACAATA",14,266.78,10.82,-0.02,0.04,2.95,1.06,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","GTTGATTACGAGTGGG",7,0,NA,NA,NA,NA,NA,NA,"stop","T3* Y123S S139R F156S",4
"lib2","SARS-CoV-2","GTTGATTATAATATAT",1,2.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","GTTGATTATTATACGG",5,114.8,10.24,-0.6,0.02,2.97,1.04,0,"1 nonsynonymous","P169H",1
"lib2","SARS-CoV-2","GTTGATTGAACCAGTA",2,12.47,8.66,-2.18,0.33,2.25,1.1,0.02,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","GTTGATTTACCATCCG",8,13.62,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C49G C61S T201I",3
"lib2","SARS-CoV-2","GTTGATTTAGCATAGC",15,30.72,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","R27T S41I G86Q F134N",4
"lib2","SARS-CoV-2","GTTGCAAAAGTTCAAA",4,17.19,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T15S F62V A89V I104K Q168E",5
"lib2","SARS-CoV-2","GTTGCAAACAATTAAT",2,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11R C150S",2
"lib2","SARS-CoV-2","GTTGCAACCGTAACGC",10,172.5,9.81,-1.02,0.05,2.09,1.05,0,">1 nonsynonymous","T100K E135N V180I",3
"lib2","SARS-CoV-2","GTTGCAATAAACAGAC",2,18.26,8.84,-1.99,0.21,1.82,1.12,0.03,">1 nonsynonymous","F12S T148I",2
"lib2","SARS-CoV-2","GTTGCAATGTTGACTG",1,4.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H P82S Q168F",3
"lib2","SARS-CoV-2","GTTGCACGACAAAAAC",1,29.46,10.79,-0.05,0.05,3,1.03,0,"1 nonsynonymous","Q163G",1
"lib2","SARS-CoV-2","GTTGCACGACCAATAA",5,69.75,10.68,-0.16,0.04,2.96,1.05,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","GTTGCACGCAAGCAAC",7,0.36,NA,NA,NA,NA,NA,NA,"stop","D90L A105*",2
"lib2","SARS-CoV-2","GTTGCACGGAACGCAA",17,3.1,NA,NA,NA,NA,NA,NA,"stop","C6I N13C N30V K56T P82L V103D D112*",7
"lib2","SARS-CoV-2","GTTGCACGGCGGCGAC",9,50.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86V N171L",2
"lib2","SARS-CoV-2","GTTGCACTAAACACTT",14,41.65,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14N F99C V103L Y121A C158S",5
"lib2","SARS-CoV-2","GTTGCACTCAACACGT",3,17.91,8.98,-1.86,0.32,1.56,1.14,0.05,">1 nonsynonymous","L38P Y50F T100F Y121L K199C",5
"lib2","SARS-CoV-2","GTTGCAGAACATCCAG",16,3.38,NA,NA,NA,NA,NA,NA,"stop","W23* C61Q",2
"lib2","SARS-CoV-2","GTTGCAGCACGAAAAC",5,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37D V103E",2
"lib2","SARS-CoV-2","GTTGCAGGTTACGACA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8I Y21R D90S N118G G172V P197T",6
"lib2","SARS-CoV-2","GTTGCATGACACATTA",14,183.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8D Y175E",2
"lib2","SARS-CoV-2","GTTGCATTTTATAAGA",5,1.13,NA,NA,NA,NA,NA,NA,"stop","Y39* D75* Q168F",3
"lib2","SARS-CoV-2","GTTGCCAAATCCCAGT",1,11.52,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","K94P Y119C",2
"lib2","SARS-CoV-2","GTTGCCAATTTGAACG",9,100.67,7.7,-3.13,0.1,1.85,1.09,0,">1 nonsynonymous","G51F I138E F156C",3
"lib2","SARS-CoV-2","GTTGCCACTAGTTAAA",10,35.68,10.45,-0.38,0.02,2.93,1.06,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","GTTGCCATTTGAAGTT",8,3.14,NA,NA,NA,NA,NA,NA,"stop","K26* G117C N130P Q168T",4
"lib2","SARS-CoV-2","GTTGCCCATCGATACT",2,1.2,NA,NA,NA,NA,NA,NA,"stop","E10N Q84* D98V P191T",4
"lib2","SARS-CoV-2","GTTGCCCTCACTAAGG",7,83.78,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33Y Y50F C158V T170N",4
"lib2","SARS-CoV-2","GTTGCCTAGATAGAGC",3,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q I28R W106V R136L",4
"lib2","SARS-CoV-2","GTTGCCTCCACCTCCG",6,88.05,10.83,-0.01,0.03,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGCCTGTACAGGAC",6,45.11,9.67,-1.17,0.06,2.8,1.03,0,">1 nonsynonymous","N4K D59A G146W",3
"lib2","SARS-CoV-2","GTTGCCTTTAATCACA",2,32.06,10.68,-0.16,0.06,2.89,1.15,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","GTTGCGCACTAATTTA",1,51.94,10.76,-0.08,0.07,2.81,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGCGGACTAGAAAT",5,31.5,8.41,-2.42,0.17,1.5,1.13,0.01,">1 nonsynonymous","L57S P133Q",2
"lib2","SARS-CoV-2","GTTGCGTCATTTTTAA",2,12.71,11.18,0.35,0.08,2.91,1.09,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","GTTGCGTTGCACAGGT",7,125.51,9.67,-1.17,0.03,2.07,1.05,0,"1 nonsynonymous","F8Q",1
"lib2","SARS-CoV-2","GTTGCTAAACATACAA",4,83.72,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N24L A42N T148D G172D",4
"lib2","SARS-CoV-2","GTTGCTAAACTGCCAA",2,12.85,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I80T S113T Y119L L131Y K198M",5
"lib2","SARS-CoV-2","GTTGCTACAATAATTG",2,14.33,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R78F Q84D K132T E141W Q168M",5
"lib2","SARS-CoV-2","GTTGCTAGCTCTCAAA",11,172.11,10.69,-0.15,0.04,2.86,1.06,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","GTTGCTATTTCTTAAA",3,0.7,NA,NA,NA,NA,NA,NA,"stop","K48* F99S K128S V173F",4
"lib2","SARS-CoV-2","GTTGCTCATTGATTTT",7,137.98,8.17,-2.66,0.11,2.28,1.08,0,">1 nonsynonymous","G9P I104T Y119S",3
"lib2","SARS-CoV-2","GTTGCTCGAGAATATA",1,23.04,10.89,0.05,0.1,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGCTCTAACGCAAT",2,9.13,8.68,-2.15,0.33,1.5,1.13,0.03,">1 nonsynonymous","L5G R136P G174S",3
"lib2","SARS-CoV-2","GTTGCTCTGCTTCGAA",1,25.26,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","E10N F17V N30R V37A L95G N107P G166Q Y175D",8
"lib2","SARS-CoV-2","GTTGCTCTTTTGTTGA",3,7.23,10.58,-0.26,0.27,2.75,1,0.01,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","GTTGCTGGTATGGAAA",2,58.32,10.78,-0.05,0.03,2.99,1.03,0,">1 nonsynonymous","L60A V153A",2
"lib2","SARS-CoV-2","GTTGCTTACTAGTCAT",10,1.88,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","GTTGGAAACTGCAATA",1,26.45,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S19K S36V F62A F99C C150S S200L",6
"lib2","SARS-CoV-2","GTTGGAAAGTGCAGTT",5,84.99,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D98W N118I Q176P",3
"lib2","SARS-CoV-2","GTTGGAACTTATGTAT",5,40.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V32R Y35H C49L Y121C P149A G166C S184D",7
"lib2","SARS-CoV-2","GTTGGAAGTTAAAGAC",5,141.49,10.59,-0.24,0.04,2.92,1.05,0,">1 nonsynonymous","Q144H K199L",2
"lib2","SARS-CoV-2","GTTGGAATCCGATTGC",2,124.26,8.54,-2.29,0.12,1.5,1.09,0,"1 nonsynonymous","Y178D",1
"lib2","SARS-CoV-2","GTTGGAATCCGGCAAC",15,94.88,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A33K F44P Y165R G166V",4
"lib2","SARS-CoV-2","GTTGGAATCTAAACAG",11,97.74,10.16,-0.67,0.06,2.86,1.06,0,">1 nonsynonymous","G9R F12L V32T N58R",4
"lib2","SARS-CoV-2","GTTGGACAATTGAATT",1,17.35,8.42,-2.41,0.2,1.5,1.11,0.02,">1 nonsynonymous","F44K D98R G152P",3
"lib2","SARS-CoV-2","GTTGGACACAAGTAAG",1,39.2,10.73,-0.11,0.07,2.92,1.07,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","GTTGGACCAGCGATTG",2,68.29,10.03,-0.8,0.06,2.17,1.06,0,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","GTTGGACCAGTTGCAT",9,25.98,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L95S L111N S200N",3
"lib2","SARS-CoV-2","GTTGGACTTACTAGAT",1,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P V20R P96W",3
"lib2","SARS-CoV-2","GTTGGAGCAGTAACCC",6,110.52,10.3,-0.54,0.04,2.82,1.13,0,"1 nonsynonymous","V65S",1
"lib2","SARS-CoV-2","GTTGGAGGGTAAACCC",6,19.28,NA,NA,NA,NA,NA,NA,"stop","D90* P133I",2
"lib2","SARS-CoV-2","GTTGGCAACGCTTTAG",9,91.89,10.89,0.05,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGGCAGCATCATAA",4,88.91,10.79,-0.04,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGGCCCTCGAACAG",20,10,NA,NA,NA,NA,NA,NA,"stop","A14* A42F P82S L95R",4
"lib2","SARS-CoV-2","GTTGGCCTATTAAACT",1,9.07,NA,NA,NA,NA,NA,0.21,"1 nonsynonymous","P177M",1
"lib2","SARS-CoV-2","GTTGGCTAATATCAAG",4,90.4,10.76,-0.08,0.04,2.92,1.09,0,"1 nonsynonymous","T148F",1
"lib2","SARS-CoV-2","GTTGGGAACCCGACAA",8,138.34,11.1,0.27,0.05,2.91,1.08,0,">1 nonsynonymous","K26R S53L L60Y E154R T201Q",5
"lib2","SARS-CoV-2","GTTGGGAAGATCTATT",3,13.45,7.99,-2.85,0.32,1.85,1.19,0.03,">1 nonsynonymous","A33V L122P S164L",3
"lib2","SARS-CoV-2","GTTGGGAATACTGAGA",3,0,NA,NA,NA,NA,NA,NA,"stop","F70L Y121* Y143S",3
"lib2","SARS-CoV-2","GTTGGGATAACGTGCG",4,81.12,10.37,-0.47,0.06,2.84,1.08,0,">1 nonsynonymous","V37I R136S",2
"lib2","SARS-CoV-2","GTTGGGGCAGCGAACT",10,90.66,10.95,0.11,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGGGGCGGTTATTA",1,51.64,10.53,-0.31,0.08,2.8,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","GTTGGGGGATCGAACC",11,221.55,9.84,-1,0.06,2.47,1.02,0,">1 nonsynonymous","F17I Q168F",2
"lib2","SARS-CoV-2","GTTGGTAACAGAAATG",3,45.34,8.5,-2.34,0.07,2.72,1.04,0,">1 nonsynonymous","C6V Q144E F156G",3
"lib2","SARS-CoV-2","GTTGGTACTGAATATA",5,5.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G83S F99S",3
"lib2","SARS-CoV-2","GTTGGTAGCCTCAAAT",6,15.32,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V20A G51A V77R N92S N130Y",5
"lib2","SARS-CoV-2","GTTGGTAGGCGGAACG",6,0.07,NA,NA,NA,NA,NA,NA,"stop","T46A G51* F126*",3
"lib2","SARS-CoV-2","GTTGGTCATGCTGTTG",1,4.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105S L122Y F156N",3
"lib2","SARS-CoV-2","GTTGGTCATTAGTCAT",4,12.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S F99T",2
"lib2","SARS-CoV-2","GTTGGTGTGATTCAAC",1,25.21,10.9,0.06,0.07,3,1.02,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","GTTGGTTACCCCGTAA",1,73.05,9.5,-1.33,0.06,2.86,1.12,0,">1 nonsynonymous","S36R Y119N",2
"lib2","SARS-CoV-2","GTTGTAAACTTTAGCG",19,305.69,9.31,-1.53,0.04,1.93,1.08,0,">1 nonsynonymous","L38K Y121F",2
"lib2","SARS-CoV-2","GTTGTAACATACAGCC",4,14.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F17W C61T I80G L188W",4
"lib2","SARS-CoV-2","GTTGTAACTAACAAGG",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G F167A",2
"lib2","SARS-CoV-2","GTTGTAAGAACTCATA",1,21.42,9.79,-1.05,0.07,2.95,1.02,0,">1 nonsynonymous","Y39C V52M C61Y F156V A190E",5
"lib2","SARS-CoV-2","GTTGTAATTAATTTAT",14,121.36,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S36L K94N V103T",3
"lib2","SARS-CoV-2","GTTGTACAGATTAGCG",3,0.16,NA,NA,NA,NA,NA,NA,"stop","N4C V11S A89* R127C Y175L",5
"lib2","SARS-CoV-2","GTTGTACATATTATCT",7,28.06,6.73,-4.11,0.44,1.5,1.15,0.03,">1 nonsynonymous","G9L Y35N R136G",3
"lib2","SARS-CoV-2","GTTGTACCCAGGTTAC",2,45.82,10.02,-0.81,0.06,2.85,1.01,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","GTTGTAGGCCGAACGT",7,222.28,8.73,-2.1,0.06,2.82,1.04,0,">1 nonsynonymous","G117L G152S T201N",3
"lib2","SARS-CoV-2","GTTGTATTTGTTGGAC",3,70.44,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R27K F44Q P82M Q144Y L162G Q168G",6
"lib2","SARS-CoV-2","GTTGTCAACCCATGAC",6,69.03,10.9,0.06,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGTCAATTTTCTGG",5,49.43,10.85,0.01,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTGTCACATGTACAA",4,36.1,10.6,-0.23,0.07,2.87,1.06,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","GTTGTCACGGTCATTG",10,213.17,10.84,0,0.05,2.94,1.05,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","GTTGTCACTACAGCAA",3,1.95,NA,NA,NA,NA,NA,NA,"stop","L5* R27P P54S K114C L125* N157* K198L",7
"lib2","SARS-CoV-2","GTTGTCATGCGACCTG",3,7.33,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","GTTGTCCCATCTAAGT",1,13.38,8.37,-2.47,0.21,2.16,1.04,0.01,">1 nonsynonymous","N107T P169T",2
"lib2","SARS-CoV-2","GTTGTCCGAAGCCATG",1,21.73,8.17,-2.67,0.3,1.7,1.04,0.04,">1 nonsynonymous","V37Y T85H D90S G117M T170S",5
"lib2","SARS-CoV-2","GTTGTCCGCGATGAAC",3,14.48,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44T G83R C102R",3
"lib2","SARS-CoV-2","GTTGTCCGGCATGAAG",7,168.22,10.62,-0.21,0.03,2.92,1.06,0,"1 nonsynonymous","F134A",1
"lib2","SARS-CoV-2","GTTGTCCGGGATTTTG",10,72.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T46C G86A K128Y",3
"lib2","SARS-CoV-2","GTTGTCCTACATTACC",5,96.74,7.86,-2.98,0.14,1.86,1.13,0.01,">1 nonsynonymous","A14D K87C G117M",3
"lib2","SARS-CoV-2","GTTGTCGACGTATAAA",15,97.01,9.48,-1.35,0.06,1.84,1.08,0,">1 nonsynonymous","N64G Y93F K132S",3
"lib2","SARS-CoV-2","GTTGTCGCGAAAAAAA",1,9.76,10.11,-0.73,0.13,2.49,1.04,0.01,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","GTTGTCGCTAAATCTA",1,19.83,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","S19T V32I L38P K48F N58L N120M G155H Y178D",8
"lib2","SARS-CoV-2","GTTGTCGTACTTTGAT",2,42.46,10.79,-0.04,0.06,2.87,1.14,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","GTTGTCTAGTCCATAT",7,25.43,10.87,0.03,0.08,2.99,1.01,0,"1 nonsynonymous","V37D",1
"lib2","SARS-CoV-2","GTTGTCTGTCAGTCAC",12,165.42,9.73,-1.11,0.08,2.28,1.03,0,">1 nonsynonymous","C6F V52Y S129E",3
"lib2","SARS-CoV-2","GTTGTCTTCATATCGT",10,27.11,6.81,-4.03,0.39,1.5,1.32,0.03,">1 nonsynonymous","F17E D34N Y143K",3
"lib2","SARS-CoV-2","GTTGTGAAAGCCGACG",10,122.8,10.76,-0.08,0.06,2.83,1.14,0,">1 nonsynonymous","A42G E141H",2
"lib2","SARS-CoV-2","GTTGTGAACCATATTC",1,13.03,10.63,-0.2,0.09,2.98,1,0,">1 nonsynonymous","R27K S139R E186N",3
"lib2","SARS-CoV-2","GTTGTGAACGGGATCA",1,28.38,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S29R S41Y Q84L N120V C158V G196D",6
"lib2","SARS-CoV-2","GTTGTGAGTGTTCACA",12,99.27,9.58,-1.25,0.07,2.07,1.06,0,">1 nonsynonymous","G9R K56G G83D K132L S184N",5
"lib2","SARS-CoV-2","GTTGTGATAGGACTCC",1,18.64,10.44,-0.39,0.06,2.95,1.07,0,">1 nonsynonymous","L60H A81E",2
"lib2","SARS-CoV-2","GTTGTGATCCTTAAAT",8,56.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T85M I88G L162W",3
"lib2","SARS-CoV-2","GTTGTGCATACAAAAC",10,21.95,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C61K D90P A105R G174V P197T",5
"lib2","SARS-CoV-2","GTTGTGCATTATACGC",2,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86R V103F",2
"lib2","SARS-CoV-2","GTTGTGCCAGTTAAAA",4,0.37,NA,NA,NA,NA,NA,NA,"stop","C6D T85R F99V N107* F134W P149F",6
"lib2","SARS-CoV-2","GTTGTGCGCTGCTGAA",2,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I Y93L Y119L I138R",4
"lib2","SARS-CoV-2","GTTGTGCGGTTAGGAC",3,90.27,10.31,-0.53,0.05,2.82,1.04,0,">1 nonsynonymous","D59T R136V P197Q",3
"lib2","SARS-CoV-2","GTTGTGCTAGGACTGA",2,47.69,10.46,-0.37,0.06,2.98,1.01,0,">1 nonsynonymous","A14I C61S",2
"lib2","SARS-CoV-2","GTTGTGTATCGATGAA",1,5.59,8.45,-2.39,0.22,2.01,1.13,0.02,">1 nonsynonymous","W106R P169T G174R Y178H",4
"lib2","SARS-CoV-2","GTTGTGTCGATAATTA",2,73.35,8.65,-2.18,0.15,1.72,1.09,0.01,">1 nonsynonymous","F8S S36L N58V L122W",4
"lib2","SARS-CoV-2","GTTGTTACATGAAGCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182D",1
"lib2","SARS-CoV-2","GTTGTTAGCTTTAAAC",13,71.96,6,-4.84,1.72,1.5,1.13,0.01,">1 nonsynonymous","S45C F99Q",2
"lib2","SARS-CoV-2","GTTGTTAGGGAATCAA",1,1.07,NA,NA,NA,NA,NA,NA,"stop","N64A T85F G166V Q168T K198*",5
"lib2","SARS-CoV-2","GTTGTTATAGGTTCAG",12,56.19,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L95Q V103F",2
"lib2","SARS-CoV-2","GTTGTTCAAAATAAGG",8,14.86,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","Y35T L57R L95I V103S Y143S",5
"lib2","SARS-CoV-2","GTTGTTGAACTAGGAT",7,82.67,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","R25S Y35C C49R D90S P177T",5
"lib2","SARS-CoV-2","GTTGTTGAGCCTCTTG",3,66.03,10.2,-0.63,0.06,2.67,1.01,0,">1 nonsynonymous","V37P D98E S139A Q163T",4
"lib2","SARS-CoV-2","GTTGTTTCGATTGGCG",12,170.14,10.23,-0.6,0.04,2.84,1.03,0,">1 nonsynonymous","V37S Y123A S129C",3
"lib2","SARS-CoV-2","GTTTAAAACTAACAAT",6,19.56,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F8S F99Y N107Y",3
"lib2","SARS-CoV-2","GTTTAAAAGATTCACT",2,12,9.74,-1.1,0.18,2.02,1.02,0.01,">1 nonsynonymous","N13T A105G S200I",3
"lib2","SARS-CoV-2","GTTTAAAAGTTCTATT",4,22.62,9.94,-0.9,0.13,2.32,1.05,0.01,">1 nonsynonymous","V37L W106V",2
"lib2","SARS-CoV-2","GTTTAAACATTTTTGA",8,99.66,9.92,-0.92,0.04,2.08,1.04,0,"1 nonsynonymous","F99H",1
"lib2","SARS-CoV-2","GTTTAAACGGAGTTCC",3,42.35,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37M R73M W106Y Y119L S129L A192L T201R",7
"lib2","SARS-CoV-2","GTTTAAACGTTACCCC",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D L57F",2
"lib2","SARS-CoV-2","GTTTAAAGCAGGAACA",6,78.98,10.76,-0.07,0.04,2.99,1.02,0,"1 nonsynonymous","N110E",1
"lib2","SARS-CoV-2","GTTTAAAGCATGTAAG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","I2L N13F Y39R Y91* G174L",5
"lib2","SARS-CoV-2","GTTTAAAGTACAATAG",11,89.22,6.28,-4.56,0.61,1.5,1.19,0.01,">1 nonsynonymous","A18C T63F C158L A192S",4
"lib2","SARS-CoV-2","GTTTAAATCCTGTCCG",7,31.06,8.6,-2.24,0.23,1.54,1.04,0.02,">1 nonsynonymous","L95T G116L",2
"lib2","SARS-CoV-2","GTTTAAATTACACATC",4,80.45,10.86,0.03,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTAACAATCGACGT",3,88.14,10.66,-0.18,0.04,2.94,1.07,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","GTTTAACTATTGAGGG",3,67.97,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F12N V37T L95A N110D L122T",5
"lib2","SARS-CoV-2","GTTTAACTCAAATTTA",4,47.04,10.74,-0.1,0.06,2.89,1.12,0,">1 nonsynonymous","S43I L122C K199Y",3
"lib2","SARS-CoV-2","GTTTAACTTCAATAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* S53P K87* F134A",4
"lib2","SARS-CoV-2","GTTTAAGAACGCATAG",2,12.9,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","A22P G74S P161I",3
"lib2","SARS-CoV-2","GTTTAAGCAAACGGTA",1,78.83,10.4,-0.43,0.05,2.94,1.08,0,"1 nonsynonymous","P169Y",1
"lib2","SARS-CoV-2","GTTTAAGCACCTACAC",1,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D L38E F62D Q144T",4
"lib2","SARS-CoV-2","GTTTAAGTTCTTAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4V N40S L60* T100S W106F P149* G166S S200L",8
"lib2","SARS-CoV-2","GTTTAATACAGCCCTT",5,46.33,10.18,-0.65,0.08,2.66,1.07,0,"1 nonsynonymous","G51D",1
"lib2","SARS-CoV-2","GTTTAATACTATATAA",10,37.65,6.1,-4.74,0.57,1.5,1.12,0.01,">1 nonsynonymous","T3M N64M N107T S129L I138T Q144L",6
"lib2","SARS-CoV-2","GTTTAATCAAAAAAAC",1,59.3,10.04,-0.8,0.08,2.67,1.05,0,">1 nonsynonymous","V77M T85K I138M V153G",4
"lib2","SARS-CoV-2","GTTTAATCCAGCCTTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V182D",1
"lib2","SARS-CoV-2","GTTTAATCCGACCATC",5,26.99,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","E10L S19E F44R T201N",4
"lib2","SARS-CoV-2","GTTTAATCCTGGGCGT",9,150.56,10.94,0.1,0.06,2.91,1.08,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","GTTTAATGATACACAA",26,4.42,NA,NA,NA,NA,NA,NA,"stop","C31* S41D",2
"lib2","SARS-CoV-2","GTTTAATGCTGCATCA",1,16.64,6,-4.84,2,3,1.13,0,">1 nonsynonymous","T100F F167V L187S",3
"lib2","SARS-CoV-2","GTTTACAAACGAATGA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y39R I88K N120* S139* F160I",5
"lib2","SARS-CoV-2","GTTTACAAATCCGGGG",4,24.35,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y91D G117T",2
"lib2","SARS-CoV-2","GTTTACACGCCAAGGT",5,60.92,9.7,-1.13,0.09,2.27,1.06,0,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","GTTTACAGCAAAAAAA",4,124.18,10.06,-0.78,0.05,2.75,1.06,0,">1 nonsynonymous","V65H T201R",2
"lib2","SARS-CoV-2","GTTTACAGTGCAGAGT",4,16.71,7.5,-3.34,0.28,1.5,1.05,0.02,">1 nonsynonymous","I104R F160W F167Q Q176K",4
"lib2","SARS-CoV-2","GTTTACATAATTGAAC",7,47.99,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","G74V T170V",2
"lib2","SARS-CoV-2","GTTTACCAGAAGTCGC",4,57.95,6.16,-4.67,0.72,1.5,1.26,0.02,">1 nonsynonymous","F17L I28K",2
"lib2","SARS-CoV-2","GTTTACCATGTGATTT",1,14.06,10.44,-0.4,0.09,2.82,1.14,0,">1 nonsynonymous","T3F E10G I28M",3
"lib2","SARS-CoV-2","GTTTACCCCTAAAGAT",9,100.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33E F47L N107T Y165P",4
"lib2","SARS-CoV-2","GTTTACCCTAGAGCAA",1,1.81,NA,NA,NA,NA,NA,NA,"stop","P96* W106S",2
"lib2","SARS-CoV-2","GTTTACCGAACCCTGT",1,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R V71R I138L",3
"lib2","SARS-CoV-2","GTTTACCTAATACACA",4,84.5,10.17,-0.67,0.08,2.56,1.03,0,">1 nonsynonymous","S41T D90L L122W E141M",4
"lib2","SARS-CoV-2","GTTTACCTTCTCTATA",2,28.06,9.81,-1.03,0.15,2.35,1.04,0.01,">1 nonsynonymous","Y35S Y178T",2
"lib2","SARS-CoV-2","GTTTACGAAAGACTCC",4,47.49,9.13,-1.7,0.37,1.5,1,0.05,">1 nonsynonymous","S45R L122I F134D",3
"lib2","SARS-CoV-2","GTTTACGATATTTATA",4,30.95,10.72,-0.12,0.04,2.97,1,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","GTTTACGATGACTCTA",2,6.57,6.01,-4.82,2,1.5,1.25,0.04,">1 nonsynonymous","V37R T46P S129G P149T",4
"lib2","SARS-CoV-2","GTTTACGCACTACCGA",9,67.25,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A14W R127E",2
"lib2","SARS-CoV-2","GTTTACGCATACTTGA",1,13.14,9.7,-1.14,0.29,1.54,1.09,0.04,">1 nonsynonymous","F12V A14T R27T Y119S",4
"lib2","SARS-CoV-2","GTTTACGCTGAACAAT",1,21.63,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I88T Y93L",2
"lib2","SARS-CoV-2","GTTTACGGAAGGGCCC",3,0,NA,NA,NA,NA,NA,NA,"stop","V115Q N120*",2
"lib2","SARS-CoV-2","GTTTACGGCTCGACAA",1,2.82,NA,NA,NA,NA,NA,NA,"stop","V32R Q84* Y119D G146K",4
"lib2","SARS-CoV-2","GTTTACGGTCCCCGAT",11,61.04,10.8,-0.03,0.1,2.77,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTACGTAATAAAAT",4,118.65,10.63,-0.21,0.07,2.86,1.16,0,">1 nonsynonymous","V65L T140L",2
"lib2","SARS-CoV-2","GTTTACGTCAAGTCTA",7,125.65,10.83,0,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTACGTCATATTTG",3,47.91,10.6,-0.23,0.05,2.87,1.08,0,">1 nonsynonymous","S41C I142M",2
"lib2","SARS-CoV-2","GTTTACTCCAAAGATC",14,137.72,8.65,-2.19,0.15,1.5,1.02,0.01,">1 nonsynonymous","G51A L57P",2
"lib2","SARS-CoV-2","GTTTACTGAAAGCACA",10,164.03,10.43,-0.41,0.05,2.91,1.09,0,">1 nonsynonymous","F44D P149K",2
"lib2","SARS-CoV-2","GTTTACTGTAGTGATA",2,32.09,9.39,-1.44,0.14,2.04,1.05,0.01,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","GTTTACTTCAGTACGC",3,25.41,9.62,-1.22,0.11,2.23,1.05,0.01,">1 nonsynonymous","E10Y S184L",2
"lib2","SARS-CoV-2","GTTTAGAAACTTGCGT",2,58.8,8.22,-2.62,0.09,2.4,1.05,0,">1 nonsynonymous","A14R N40P G117T",3
"lib2","SARS-CoV-2","GTTTAGAAAGCATTTA",3,14.28,6,-4.84,2,2.52,1.21,0.04,">1 nonsynonymous","S45N I88S P177L",3
"lib2","SARS-CoV-2","GTTTAGAAATCAGTAC",2,47.51,7.48,-3.35,0.37,1.5,1.2,0.04,">1 nonsynonymous","P82L D98A",2
"lib2","SARS-CoV-2","GTTTAGAATACACATA",5,54.78,10.76,-0.08,0.04,2.92,1.1,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","GTTTAGAATTAATCGG",4,40.98,6,-4.84,1.98,3,1.12,0,">1 nonsynonymous","G9S G51F Y143K R179W",4
"lib2","SARS-CoV-2","GTTTAGACGCTATGGA",5,75.15,10.93,0.1,0.05,2.94,1.05,0,"1 nonsynonymous","L5P",1
"lib2","SARS-CoV-2","GTTTAGACTAATTACG",1,22.13,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","Y91T W106A I142T",3
"lib2","SARS-CoV-2","GTTTAGACTCTTTTCG",1,7.77,8.55,-2.28,0.33,1.5,1,0.04,">1 nonsynonymous","V103A N120S Y178H",3
"lib2","SARS-CoV-2","GTTTAGATAATAAGTC",10,65.87,10.76,-0.08,0.04,2.9,1.1,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","GTTTAGATCAGCCGCA",3,47.51,7.81,-3.03,0.16,1.69,1.1,0.01,">1 nonsynonymous","F8V I142G S184T",3
"lib2","SARS-CoV-2","GTTTAGATCCTAGTGA",9,84.46,10.69,-0.15,0.04,2.99,1,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","GTTTAGATCTATTGGA",2,50.24,10.83,-0.01,0.07,2.91,1.11,0,">1 nonsynonymous","V37S L122N K128D",3
"lib2","SARS-CoV-2","GTTTAGATTCCATGAC",13,85.36,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V180P",1
"lib2","SARS-CoV-2","GTTTAGCCCAGGGAAG",9,1.51,NA,NA,NA,NA,NA,NA,"stop","K26P L60*",2
"lib2","SARS-CoV-2","GTTTAGCCTAAGGAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W A89M K114W R127L G152A F156L F167S Q176R",8
"lib2","SARS-CoV-2","GTTTAGCGCAAATCCG",4,33.15,9.9,-0.94,0.08,2.79,1.03,0,">1 nonsynonymous","N58L N118Q",2
"lib2","SARS-CoV-2","GTTTAGCGTAGATACC",3,20.21,9.59,-1.24,0.29,1.5,1.03,0.03,"1 nonsynonymous","I72S",1
"lib2","SARS-CoV-2","GTTTAGCTGATTCCAA",2,55.33,10.33,-0.51,0.06,2.84,1.07,0,">1 nonsynonymous","E10V G152S",2
"lib2","SARS-CoV-2","GTTTAGCTTCATAAAA",4,1.61,NA,NA,NA,NA,NA,NA,"stop","D98F A105E G117V F156* A190N",5
"lib2","SARS-CoV-2","GTTTAGGAAAACGCCC",3,80.86,9.01,-1.82,0.12,1.5,1.05,0.01,"1 nonsynonymous","I28P",1
"lib2","SARS-CoV-2","GTTTAGGAAGTTTATA",3,48.28,7.14,-3.69,0.25,1.5,1.09,0.02,">1 nonsynonymous","L57I D75L N120S Y143V",4
"lib2","SARS-CoV-2","GTTTAGGAGATATCGA",3,75.26,10.8,-0.04,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTAGGAGTCCGATA",22,8.59,NA,NA,NA,NA,NA,NA,"stop","A18Q D34R K56G S69R F70* Y91M V103I T140P G166F",9
"lib2","SARS-CoV-2","GTTTAGGATACCTAGA",2,12.78,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","T46K R127I",2
"lib2","SARS-CoV-2","GTTTAGGATTCGACTT",3,47.5,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D68F Q84A Y121W",3
"lib2","SARS-CoV-2","GTTTAGGTCCATAAAA",3,21.9,10.46,-0.38,0.04,2.84,1.06,0,">1 nonsynonymous","D97F N120F",2
"lib2","SARS-CoV-2","GTTTAGTATCAAAAGT",1,6.91,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V37M N92K N120E Y175F",4
"lib2","SARS-CoV-2","GTTTAGTTTACCTACC",3,19.69,9.29,-1.54,0.06,2.77,1.14,0,">1 nonsynonymous","F62N G83F Y119R A190G",4
"lib2","SARS-CoV-2","GTTTAGTTTTCGATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L T148M P177C A190L",4
"lib2","SARS-CoV-2","GTTTATAACTCTAAGC",1,96.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60T G166R Y175D",3
"lib2","SARS-CoV-2","GTTTATAATGTACCAA",2,21.18,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G9D V37N V71G D112V G117Q",5
"lib2","SARS-CoV-2","GTTTATACGTGTTTCA",1,52.06,9.17,-1.67,0.11,2.86,1.06,0.01,">1 nonsynonymous","T63V Y119W",2
"lib2","SARS-CoV-2","GTTTATATATTCTTGT",2,64.87,10.35,-0.49,0.03,2.89,1.06,0,">1 nonsynonymous","S41V T140I F160S",3
"lib2","SARS-CoV-2","GTTTATCAAATAACTA",3,58.61,10.88,0.04,0.07,2.96,1.06,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","GTTTATCAATTTAAGG",4,116.88,10.84,0,0.05,2.95,1.06,0,">1 nonsynonymous","S129T Y143F A190H",3
"lib2","SARS-CoV-2","GTTTATCAGCAGCTTT",1,31.44,10.69,-0.15,0.09,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTATCAGGGTACAA",1,3.99,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","GTTTATCCATGTACCT",1,7.11,6.48,-4.36,0.79,1.5,1.15,0.02,">1 nonsynonymous","I28V A81D N110F",3
"lib2","SARS-CoV-2","GTTTATCGATTTACCT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","GTTTATCTTGAAAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* V32T F160A",3
"lib2","SARS-CoV-2","GTTTATCTTGCGTTTC",3,40.58,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8A F17A K56H L95W P169D",5
"lib2","SARS-CoV-2","GTTTATGGAGTTTGAT",8,63.85,7.5,-3.33,0.13,1.5,1.08,0,">1 nonsynonymous","F12K S29T C61Q G146T H189C",5
"lib2","SARS-CoV-2","GTTTATGGATATTCCT",1,26.34,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y50G Y119L A190T",3
"lib2","SARS-CoV-2","GTTTATGGTATAAACC",5,33.28,8.33,-2.51,0.16,2.68,1.05,0.01,">1 nonsynonymous","A14S T85M Q168K P197R",4
"lib2","SARS-CoV-2","GTTTATGTACCAAAAC",2,69.42,8.41,-2.42,0.17,1.68,1.05,0.01,">1 nonsynonymous","I2V T100R D112L S129T V180I",5
"lib2","SARS-CoV-2","GTTTATTAACAAATCT",11,166.57,8.04,-2.8,0.11,1.6,1.1,0,">1 nonsynonymous","C6L Y39W G166L",3
"lib2","SARS-CoV-2","GTTTATTACCATGGAA",2,14.05,9.31,-1.53,0.16,2.33,1,0.01,">1 nonsynonymous","D34F I138P",2
"lib2","SARS-CoV-2","GTTTATTACTACAAAT",2,32.77,7.02,-3.82,0.39,1.5,1.15,0.03,">1 nonsynonymous","A33E Y178R",2
"lib2","SARS-CoV-2","GTTTATTATGTAAAAT",2,16.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13R D90T I104W",3
"lib2","SARS-CoV-2","GTTTATTCCTAGCTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","GTTTATTCGCACATTA",1,47.19,10.58,-0.26,0.05,2.87,1.16,0,"1 nonsynonymous","P191C",1
"lib2","SARS-CoV-2","GTTTATTGAGCATACA",15,386.84,10.35,-0.49,0.03,2.94,1.03,0,">1 nonsynonymous","A33P F47L",2
"lib2","SARS-CoV-2","GTTTATTTAAATAGAA",10,128.6,10.25,-0.58,0.05,2.79,1.08,0,">1 nonsynonymous","N58S K87Y I138P",3
"lib2","SARS-CoV-2","GTTTATTTTAGCTGGA",1,36.57,9.8,-1.04,0.14,2.28,1.02,0.01,">1 nonsynonymous","K26V R127S A145S",3
"lib2","SARS-CoV-2","GTTTCAAAAAAATCAA",12,134.79,10.8,-0.03,0.02,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTCAAACAATAGCG",1,7.99,10.73,-0.1,0.12,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTCAACTATCTCTA",1,31.48,8.96,-1.87,0.37,1.5,1.07,0.06,">1 nonsynonymous","P96S N120Y G155F",3
"lib2","SARS-CoV-2","GTTTCAACTGCTAGGA",6,33.22,10.75,-0.09,0.05,2.95,1.02,0,"1 nonsynonymous","N151C",1
"lib2","SARS-CoV-2","GTTTCAATCAAAAATT",9,42.1,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","Q84L V103S G117R S129L",4
"lib2","SARS-CoV-2","GTTTCAATCTTCATTA",6,34.29,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D90C R127F",2
"lib2","SARS-CoV-2","GTTTCAATCTTGAAAG",3,14.92,10.29,-0.54,0.08,2.92,1,0,">1 nonsynonymous","A33P K87M K114R",3
"lib2","SARS-CoV-2","GTTTCAATGATACGGC",6,72.7,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L60S E135D Q163T P177T K198F",5
"lib2","SARS-CoV-2","GTTTCAATTATGACAC",4,42.23,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","R27L K87P W106Y D137N L183N T201P",6
"lib2","SARS-CoV-2","GTTTCAATTCAAGAGT",5,30.89,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51P S69L",2
"lib2","SARS-CoV-2","GTTTCACAATAATAAA",6,42.07,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A89Y T100A Y119F T148V",4
"lib2","SARS-CoV-2","GTTTCACCGAGAACAG",2,21.52,6,-4.84,2,3,1.14,0.01,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","GTTTCACCGCCTACTC",7,48.95,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","F12L C61R I88G F99C F126K P169Q",6
"lib2","SARS-CoV-2","GTTTCACGTGTAGAAG",7,1.24,NA,NA,NA,NA,NA,NA,"stop","F47N I72*",2
"lib2","SARS-CoV-2","GTTTCAGAATCGACCT",6,94.07,10.19,-0.65,0.06,2.78,1,0,">1 nonsynonymous","D59S K94Q",2
"lib2","SARS-CoV-2","GTTTCAGATACTTGAA",12,256.13,10.78,-0.06,0.05,2.88,1.1,0,"1 nonsynonymous","R27C",1
"lib2","SARS-CoV-2","GTTTCAGCAAACGAAT",10,70.95,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G83I D112S",2
"lib2","SARS-CoV-2","GTTTCAGCCGATGTTT",17,228.65,10.35,-0.49,0.04,2.85,1.07,0,">1 nonsynonymous","V11L D98G",2
"lib2","SARS-CoV-2","GTTTCATTAGCAATCA",8,62.01,7.88,-2.95,0.13,1.98,1.08,0.01,">1 nonsynonymous","T85N Y123F C150R A192V",4
"lib2","SARS-CoV-2","GTTTCATTCTAGGGGA",9,92.05,9.61,-1.22,0.1,2.18,1.14,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","GTTTCATTGAGGAAAT",7,59,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T15D N30K V77M I88D",4
"lib2","SARS-CoV-2","GTTTCCACTTTTCGGA",9,53.67,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","I80A T85M S147A",3
"lib2","SARS-CoV-2","GTTTCCATCTCATTTA",4,70.11,6,-4.84,2,2.39,1.18,0,">1 nonsynonymous","V20D F62N D68Q Y165W",4
"lib2","SARS-CoV-2","GTTTCCCCCGTATGAC",2,25.41,9.67,-1.16,0.1,1.91,1.1,0,">1 nonsynonymous","N4M I28L K128R E135Y",4
"lib2","SARS-CoV-2","GTTTCCCCGGCTTCAA",9,54.32,8.46,-2.37,0.09,2.19,1.1,0,">1 nonsynonymous","Q84M N107I",2
"lib2","SARS-CoV-2","GTTTCCCGCGTTGAAA",2,16.53,10.3,-0.54,0.1,2.77,1.02,0.01,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","GTTTCCCTTATCCAAA",6,132.99,10.16,-0.67,0.04,2.76,1,0,"1 nonsynonymous","D34V",1
"lib2","SARS-CoV-2","GTTTCCGAACTAAAGT",5,65.31,10.7,-0.14,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTCCGAGAATAAGC",1,53.37,10.36,-0.47,0.05,2.97,1,0,">1 nonsynonymous","C61S R136L",2
"lib2","SARS-CoV-2","GTTTCCGCCGTTGGTC",7,4.2,NA,NA,NA,NA,NA,NA,"stop","K26* C158F F160L",3
"lib2","SARS-CoV-2","GTTTCCGGCAGCATTC",7,17.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","R78N F99L A105P F185N",4
"lib2","SARS-CoV-2","GTTTCCTCCCAGCTCA",3,69.43,6,-4.84,1.81,1.5,1.13,0.01,">1 nonsynonymous","Y91A Y159P Y165P",3
"lib2","SARS-CoV-2","GTTTCCTTACCTCTTA",10,234.66,10.85,0.01,0.03,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTCCTTATTCGTGC",3,88.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22H P82L G101L R136I G146V E154H P197T",7
"lib2","SARS-CoV-2","GTTTCGAAGCAAATCG",5,141.84,9.51,-1.33,0.08,2.04,1.02,0,">1 nonsynonymous","Y35T G116P K128S T140Y",4
"lib2","SARS-CoV-2","GTTTCGACCGATATAT",10,80.41,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F99Y G117N F126G E141S A190F",5
"lib2","SARS-CoV-2","GTTTCGAGACGCAAAC",2,14.87,10.39,-0.44,0.17,1.98,1,0.01,">1 nonsynonymous","A42E D137V Q168W",3
"lib2","SARS-CoV-2","GTTTCGAGGATATTAG",2,53.9,10.8,-0.03,0.07,2.9,1.1,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","GTTTCGAGGTCGTAAT",5,150.14,10.92,0.09,0.04,2.96,1.02,0,">1 nonsynonymous","F62W I104Y",2
"lib2","SARS-CoV-2","GTTTCGCAAACGGTAT",11,280.29,10.03,-0.81,0.06,2.38,1.03,0,">1 nonsynonymous","R16E I28T D90Q V173L",4
"lib2","SARS-CoV-2","GTTTCGCCCACCAATT",9,124.67,6,-4.84,2,3,1.24,0,">1 nonsynonymous","T46H G172L",2
"lib2","SARS-CoV-2","GTTTCGGTGCTACAAA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11T S19Q N107Y",3
"lib2","SARS-CoV-2","GTTTCGTAATAACGCC",10,261.07,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86V D98Y Q144R C158T",4
"lib2","SARS-CoV-2","GTTTCGTCAAAGAAAA",2,14.39,8.47,-2.36,0.2,2.57,1,0.02,"1 nonsynonymous","S113W",1
"lib2","SARS-CoV-2","GTTTCTAACAACGAAA",1,10.27,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","Y35I Y93K",2
"lib2","SARS-CoV-2","GTTTCTAACATTACGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13R Y66C K114*",3
"lib2","SARS-CoV-2","GTTTCTAACTCAAACA",9,14.14,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","C102D",1
"lib2","SARS-CoV-2","GTTTCTAGAGGCTAGA",2,7.21,8.11,-2.72,0.31,2.02,1,0.05,">1 nonsynonymous","N58T S113M F134G",3
"lib2","SARS-CoV-2","GTTTCTAGCTTTGTAA",7,109.59,8.66,-2.18,0.09,2.85,1.07,0,">1 nonsynonymous","F47M Y119G G174S",3
"lib2","SARS-CoV-2","GTTTCTATTGATTAAA",10,330.16,10.62,-0.21,0.02,2.91,1.06,0,">1 nonsynonymous","D97I N110P",2
"lib2","SARS-CoV-2","GTTTCTATTTGCCCCC",1,46.64,9.83,-1.01,0.09,1.98,1.1,0,">1 nonsynonymous","V37E S69G",2
"lib2","SARS-CoV-2","GTTTCTCCACATTAGA",2,14.01,10.22,-0.61,0.08,2.71,1,0,"1 nonsynonymous","E135Y",1
"lib2","SARS-CoV-2","GTTTCTCCATGTCTTG",2,0,NA,NA,NA,NA,NA,NA,"stop","I2S R16T D112W N120F G166*",5
"lib2","SARS-CoV-2","GTTTCTCCCGACAAAT",8,160.1,9.98,-0.86,0.05,2.48,1.06,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","GTTTCTCCCTAGCCAG",4,54.83,10.31,-0.52,0.05,2.76,1.05,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","GTTTCTCGCAACATTT",14,161.11,9.49,-1.34,0.04,1.96,1.04,0,">1 nonsynonymous","Y50T I138N",2
"lib2","SARS-CoV-2","GTTTCTCGTAAGCAAT",12,127.18,10.9,0.06,0.06,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","GTTTCTGAGAATGAAA",6,61.13,7.51,-3.33,0.2,1.5,1.06,0.01,">1 nonsynonymous","G83Q N107H P149L",3
"lib2","SARS-CoV-2","GTTTCTGCAACGTCGC",3,0.28,NA,NA,NA,NA,NA,NA,"stop","C61F N109L Y119S R179*",4
"lib2","SARS-CoV-2","GTTTCTGCTAAACATC",1,101.76,10.01,-0.82,0.05,2.86,1.01,0,">1 nonsynonymous","C31I A33S",2
"lib2","SARS-CoV-2","GTTTCTTGAAGTCGAG",6,23.61,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y50N G86L P133R E141L",4
"lib2","SARS-CoV-2","GTTTGAAAAAGGTTGG",5,97.54,10.17,-0.66,0.05,2.85,1.07,0,">1 nonsynonymous","K114T L122D F160C",3
"lib2","SARS-CoV-2","GTTTGAAACAAAATAC",10,90.9,10.79,-0.05,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTGAACAATATCAT",2,0.26,NA,NA,NA,NA,NA,NA,"stop","T15Q V52A K56* N109L",4
"lib2","SARS-CoV-2","GTTTGAAGTTCATTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y50I K56*",2
"lib2","SARS-CoV-2","GTTTGAATAAGAAATT",1,39.07,9.47,-1.36,0.1,2.02,1.06,0,">1 nonsynonymous","G9K I72A",2
"lib2","SARS-CoV-2","GTTTGACACCTTATAC",5,68.25,10.79,-0.04,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTGACACTTGACCT",8,68.42,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F8P C61G L95R F160P",4
"lib2","SARS-CoV-2","GTTTGACCCACCAACA",2,57.04,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","T3A K94E N157A P177W",4
"lib2","SARS-CoV-2","GTTTGACCCGCAACAA",5,85.09,10.73,-0.1,0.03,2.96,1.05,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","GTTTGACCCTCCCGGC",3,54.65,9.44,-1.4,0.07,2.04,1.08,0,">1 nonsynonymous","F8L C31E S36P N64K R73K K114T",6
"lib2","SARS-CoV-2","GTTTGACCCTTAGAGT",3,94.39,8.82,-2.02,0.11,1.71,1.11,0,">1 nonsynonymous","S43L L183Y T201K",3
"lib2","SARS-CoV-2","GTTTGACCTACCCCTA",11,89.29,6.56,-4.28,0.66,1.5,1.22,0.07,">1 nonsynonymous","N40T F62V E76L P149W",4
"lib2","SARS-CoV-2","GTTTGACCTCGTATGC",6,16.45,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R25K G146V E154L T201P",4
"lib2","SARS-CoV-2","GTTTGACGTAAACATT",5,104.22,6,-4.84,2,3,1.12,0,">1 nonsynonymous","R27N N40I G86A D98S N120K L183F G196E",7
"lib2","SARS-CoV-2","GTTTGACTCAGCCCCA",9,88.77,6.71,-4.13,0.33,1.5,1.13,0.02,">1 nonsynonymous","A105E V173N",2
"lib2","SARS-CoV-2","GTTTGAGAGTTAACCA",2,14.33,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y121S P161H T201L",3
"lib2","SARS-CoV-2","GTTTGAGCGGCCCCGG",5,113.6,10.69,-0.14,0.04,2.97,1.04,0,"1 nonsynonymous","T148W",1
"lib2","SARS-CoV-2","GTTTGAGCTCCGGCGT",3,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40I G51V",2
"lib2","SARS-CoV-2","GTTTGAGTAGGTAATA",1,109.59,10.84,0,0.04,2.98,1.04,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","GTTTGATATGCACGTG",2,281.57,9.32,-1.52,0.05,2.69,1.06,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","GTTTGCACAGGACTTT",5,122.26,10.38,-0.45,0.08,2.83,1.02,0,">1 nonsynonymous","T140P A190T A192V",3
"lib2","SARS-CoV-2","GTTTGCATAAAAAGAG",8,5.37,NA,NA,NA,NA,NA,NA,"stop","A14L T63*",2
"lib2","SARS-CoV-2","GTTTGCATGTATACAG",10,110.64,10.79,-0.05,0.05,2.96,1.04,0,"1 nonsynonymous","T55P",1
"lib2","SARS-CoV-2","GTTTGCATTAGGCACA",15,81.69,8.57,-2.27,0.15,1.5,1.15,0.01,">1 nonsynonymous","A89Y Y123S",2
"lib2","SARS-CoV-2","GTTTGCCCCAAGTTAC",8,27.4,9.83,-1.01,0.05,2.93,1,0,">1 nonsynonymous","A18D G116F",2
"lib2","SARS-CoV-2","GTTTGCCCGAATCGAC",4,80.71,8.71,-2.13,0.11,1.5,1.12,0.01,">1 nonsynonymous","N4L L38H D59Q K198Q",4
"lib2","SARS-CoV-2","GTTTGCGCATGAACAT",5,139.97,10.77,-0.07,0.04,2.92,1.05,0,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","GTTTGCGCCTGCTACG",4,49.24,10.74,-0.1,0.07,2.99,1.05,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","GTTTGCGGATACATTT",6,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S P82R K87A",3
"lib2","SARS-CoV-2","GTTTGCTAGACGTATG",14,150.94,10.69,-0.15,0.02,2.95,1.06,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","GTTTGCTCCGTCCCCC",2,0.02,NA,NA,NA,NA,NA,NA,"stop","I28* V173F",2
"lib2","SARS-CoV-2","GTTTGCTGAGTAATAA",7,109.38,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N24I S43D D90G T100P S129C F156M Y175L",7
"lib2","SARS-CoV-2","GTTTGCTTAGAAGAGA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","I2* K94* Y165Q",3
"lib2","SARS-CoV-2","GTTTGGAATTATTCCA",1,28.03,6.64,-4.19,0.49,1.5,1.09,0.04,">1 nonsynonymous","V11Y V37M V71E L95E S164Y",5
"lib2","SARS-CoV-2","GTTTGGAGAAAACCTC",2,18.29,6.03,-4.8,1.77,1.5,1.27,0.04,">1 nonsynonymous","F99T N107S",2
"lib2","SARS-CoV-2","GTTTGGATAGATGACA",3,56.37,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y121K Y143C",2
"lib2","SARS-CoV-2","GTTTGGCAGGGTAAAA",4,31.57,8.93,-1.9,0.12,1.91,1.1,0.01,">1 nonsynonymous","T63I K94A G116V",3
"lib2","SARS-CoV-2","GTTTGGCTGATGCATT",3,22.64,10.54,-0.29,0.09,2.85,1.14,0,">1 nonsynonymous","P96S S139T T201R",3
"lib2","SARS-CoV-2","GTTTGGCTTATGCTGG",5,0.28,NA,NA,NA,NA,NA,NA,"stop","P54L Y121L A145K P149* L162V",5
"lib2","SARS-CoV-2","GTTTGGGAACCACGCG",3,39.21,8.25,-2.59,0.16,1.92,1.09,0.01,">1 nonsynonymous","N58Y Y119I I138A",3
"lib2","SARS-CoV-2","GTTTGGGCCTATAACA",5,224.23,10.13,-0.7,0.04,2.95,1.02,0,"1 nonsynonymous","R73T",1
"lib2","SARS-CoV-2","GTTTGGGGGTTTCCAA",1,9.98,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","C6A D59I L183Y",3
"lib2","SARS-CoV-2","GTTTGGGTATAATTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* D75Y D97H G146C",4
"lib2","SARS-CoV-2","GTTTGGGTTTACCATG",1,37.15,6.17,-4.66,0.77,1.5,1.03,0.03,">1 nonsynonymous","E10G C61P G86E T100D",4
"lib2","SARS-CoV-2","GTTTGGTGACAACCGG",2,55.42,8.18,-2.65,0.17,2.46,1.07,0.01,">1 nonsynonymous","T3A N64V G146V",3
"lib2","SARS-CoV-2","GTTTGGTGTCGGCTTA",7,51.66,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1G Y91P A105K N120C",4
"lib2","SARS-CoV-2","GTTTGTAATACCGAGT",4,73.46,9.52,-1.32,0.06,2.75,1.05,0,">1 nonsynonymous","K114V E141C S164E",3
"lib2","SARS-CoV-2","GTTTGTAGCGCCACCA",9,69.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y K26E L122K Y165S",4
"lib2","SARS-CoV-2","GTTTGTATGACGTAAT",2,61.98,10.15,-0.69,0.06,2.7,1.04,0,">1 nonsynonymous","V77T F160M",2
"lib2","SARS-CoV-2","GTTTGTATGCTTAAGG",2,0.45,NA,NA,NA,NA,NA,NA,"stop","N1* A14Y A22* F44Y Y121C S139G K199H",7
"lib2","SARS-CoV-2","GTTTGTGAGGGCGAAA",1,86.8,7.42,-3.41,0.15,1.81,1.14,0,">1 nonsynonymous","N58Q R127N P133I",3
"lib2","SARS-CoV-2","GTTTGTGCAATCCTAA",3,20.85,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","N1M Y35N V103W F126R",4
"lib2","SARS-CoV-2","GTTTGTGCTACTCTCA",14,8.76,NA,NA,NA,NA,NA,NA,"stop","S41E F47L G74N D90*",4
"lib2","SARS-CoV-2","GTTTGTTCAAACTTGA",4,32.32,7.48,-3.35,0.17,1.5,1.15,0.01,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","GTTTGTTTAGAAGAAA",7,0.85,NA,NA,NA,NA,NA,NA,"stop","T63R A105K E135* Q176V",4
"lib2","SARS-CoV-2","GTTTGTTTGTAAGCAA",12,35.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C61I D68E A145V",3
"lib2","SARS-CoV-2","GTTTTAAAAGCACTTA",2,32.06,10.86,0.02,0.17,2.59,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTAAAGAAGCAGG",2,51.04,6.24,-4.59,0.63,1.5,1.12,0.02,">1 nonsynonymous","A18H Y119L F134P Y165A",4
"lib2","SARS-CoV-2","GTTTTAACACCCTCAG",16,150.73,9.89,-0.95,0.05,2.18,1.05,0,">1 nonsynonymous","C61S V103T",2
"lib2","SARS-CoV-2","GTTTTAATAAAAATTG",3,33.13,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G74V Q176R",2
"lib2","SARS-CoV-2","GTTTTAATAAACTGCT",5,108.82,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R27P S36F W106T D112N S200L",5
"lib2","SARS-CoV-2","GTTTTAATAAATCGGT",3,102.94,10.92,0.09,0.06,2.82,1.2,0,">1 nonsynonymous","V37L L122S Y143F",3
"lib2","SARS-CoV-2","GTTTTAATGGGTAGTA",7,100.51,10.82,-0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTACAAATTGCCG",8,79.5,10.38,-0.46,0.08,2.88,1.08,0,"1 nonsynonymous","N13A",1
"lib2","SARS-CoV-2","GTTTTACCGATTACAT",5,36.27,9.53,-1.31,0.1,1.9,1.06,0,">1 nonsynonymous","S43V C102I R136H",3
"lib2","SARS-CoV-2","GTTTTACGCTTGCAGT",2,43.37,9.01,-1.83,0.06,2.89,1.1,0,"1 nonsynonymous","Y143E",1
"lib2","SARS-CoV-2","GTTTTAGAAAGATAAC",13,6.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V N13Q V65T V71D P96N Y143L P177G",7
"lib2","SARS-CoV-2","GTTTTATACTGTTGCG",2,16.71,8.92,-1.92,0.15,1.59,1.07,0.01,">1 nonsynonymous","D90G I142H Q163I",3
"lib2","SARS-CoV-2","GTTTTATCGTAGACCT",15,330.2,9.7,-1.13,0.02,2.93,1.07,0,">1 nonsynonymous","I104F Y143V",2
"lib2","SARS-CoV-2","GTTTTATGACATCCTC",7,40.63,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F47Y A145I F167A",3
"lib2","SARS-CoV-2","GTTTTATGACCATAAC",10,187.79,10.83,-0.01,0.04,2.95,1.05,0,">1 nonsynonymous","L5R T55S N64T",3
"lib2","SARS-CoV-2","GTTTTATTCGAAGGAA",2,94.5,10.68,-0.15,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTATTTCCCGTTC",3,1.33,NA,NA,NA,NA,NA,NA,"stop","D68T G117Y E141L Y159*",4
"lib2","SARS-CoV-2","GTTTTATTTGTATAAA",5,0.36,NA,NA,NA,NA,NA,NA,"stop","S45* D98S",2
"lib2","SARS-CoV-2","GTTTTCAAAAAATCGC",2,14.31,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","A42W C49V T140L N151I T170N",5
"lib2","SARS-CoV-2","GTTTTCAACCTAATAT",4,43.47,10.68,-0.16,0.05,2.91,1.1,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","GTTTTCAAGAAACATG",2,28.75,9.71,-1.13,0.12,2.03,1.01,0.01,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","GTTTTCACATTATATA",5,39.31,11.07,0.24,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTCAGTTGCCCGC",1,44.71,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3V V71L G86F D112M T148S",5
"lib2","SARS-CoV-2","GTTTTCATCATATAGT",2,25.15,10.07,-0.76,0.12,2.59,1.2,0.01,">1 nonsynonymous","N13R A42L",2
"lib2","SARS-CoV-2","GTTTTCCTACCCTTAG",2,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E T85F L95P V103M G117Q K132P V173P",7
"lib2","SARS-CoV-2","GTTTTCCTCGAAAAAC",5,13.37,9.75,-1.09,0.17,2.3,1.38,0.02,">1 nonsynonymous","V11I I28V Q144I",3
"lib2","SARS-CoV-2","GTTTTCGACTCTAGTA",1,5.25,8.46,-2.38,0.15,2.89,1.11,0.01,">1 nonsynonymous","L125Y A145T T201Y",3
"lib2","SARS-CoV-2","GTTTTCGCAGGGCTAA",7,4.18,NA,NA,NA,NA,NA,NA,"stop","C31R D137T V173*",3
"lib2","SARS-CoV-2","GTTTTCGTAAACCACT",7,17.95,6.04,-4.79,1.38,1.5,1.14,0.02,">1 nonsynonymous","N13D C61T R127T Y159F",4
"lib2","SARS-CoV-2","GTTTTCGTACAAACTG",2,20.94,8.86,-1.98,0.21,1.56,1.18,0.02,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","GTTTTCTAACGTTAAA",17,146.83,6.08,-4.75,0.33,1.77,1.11,0,">1 nonsynonymous","D98N C158S S184L",3
"lib2","SARS-CoV-2","GTTTTCTACCTTGTTT",7,85,9.21,-1.63,0.07,1.96,1.03,0,">1 nonsynonymous","C6W F44T",2
"lib2","SARS-CoV-2","GTTTTCTGCGCTAACT",1,18.65,6,-4.84,2,2.1,1.2,0.01,">1 nonsynonymous","F12T D34L Y91N D98T L122E T148M Y175M",7
"lib2","SARS-CoV-2","GTTTTCTGTGATATAT",8,87.59,10.87,0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTCTTATAGGCAT",5,53.9,10.79,-0.05,0.07,2.89,1.11,0,">1 nonsynonymous","P54K N151I S200I",3
"lib2","SARS-CoV-2","GTTTTGAACATCACCT",3,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16P T63P V103R",3
"lib2","SARS-CoV-2","GTTTTGAACATCATAT",1,38.2,10.79,-0.04,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTGACATGGATAG",5,16.53,10.18,-0.65,0.12,2.57,1.42,0.01,">1 nonsynonymous","A81E E141V",2
"lib2","SARS-CoV-2","GTTTTGACCTAACATG",10,85.22,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9L A33C N64R T140A G146N C158T",6
"lib2","SARS-CoV-2","GTTTTGACGCAACACG",8,58.22,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F44H N92I",2
"lib2","SARS-CoV-2","GTTTTGACTTTACAGG",2,41.66,8.62,-2.21,0.09,2.38,1.03,0,">1 nonsynonymous","K114R Q144C P169I",3
"lib2","SARS-CoV-2","GTTTTGCATGGAGCAA",11,196.9,10.88,0.04,0.05,2.96,1.06,0,"1 nonsynonymous","P197T",1
"lib2","SARS-CoV-2","GTTTTGCGAACGGCAT",3,99.89,8.24,-2.6,0.16,2.32,1.07,0.01,">1 nonsynonymous","F17L K87F Y119H I138E",4
"lib2","SARS-CoV-2","GTTTTGGAATATTTAA",2,17.36,8.41,-2.43,0.19,1.5,1.08,0.01,">1 nonsynonymous","C49Y C61D S129N",3
"lib2","SARS-CoV-2","GTTTTGGACCATGCAT",1,14.17,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","L5S D59K D90I W106P G174M",5
"lib2","SARS-CoV-2","GTTTTGGCAAGACTCT",1,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S F160T",2
"lib2","SARS-CoV-2","GTTTTGTGTAATTAGA",9,85.85,8.6,-2.23,0.08,1.56,1.08,0,">1 nonsynonymous","I2S G9S D137G",3
"lib2","SARS-CoV-2","GTTTTGTTTATTTTAA",3,1.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R P54L K87R E141P",4
"lib2","SARS-CoV-2","GTTTTTAAATAAGTGC",2,13.73,10.61,-0.22,0.07,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","GTTTTTACGAACTAAG",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","GTTTTTCAGAATAAAC",3,47.21,8.55,-2.29,0.1,2.97,1.13,0,">1 nonsynonymous","Y123S S129R T140Q Q168L",4
"lib2","SARS-CoV-2","GTTTTTCAGGGTCGTA",1,6.43,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R73W N107C V181T",3
"lib2","SARS-CoV-2","GTTTTTCCATGCGACG",2,1.74,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","GTTTTTCCTATTTACT",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y D98F G116M R127T E154G Q176V",6
"lib2","SARS-CoV-2","GTTTTTCGCCCGAGAC",2,54.04,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S36Q T100Y N107F T148N",4
"lib2","SARS-CoV-2","GTTTTTGGATTCCTCC",1,25.95,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y91D Y121V",2
"lib2","SARS-CoV-2","GTTTTTGTACATGCGT",3,32.41,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6M S45C K56I L162R",4
"lib2","SARS-CoV-2","GTTTTTTAATATAAGT",12,95.39,9.69,-1.15,0.09,1.94,1.05,0,">1 nonsynonymous","S36D G51D K128V P149T",4
"lib2","SARS-CoV-2","GTTTTTTGACAGTCAC",14,285.31,10.85,0.02,0.04,2.94,1.08,0,"1 nonsynonymous","L188S",1
"lib2","SARS-CoV-2","GTTTTTTGCCGAGTTG",1,11.89,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","E10Q A18V Y39R L60S I88T V173F",6
"lib2","SARS-CoV-2","GTTTTTTGTTTGATTG",5,157.2,6.27,-4.57,0.52,1.5,1.14,0.01,">1 nonsynonymous","Y91N F99Y Y175N",3
"lib2","SARS-CoV-2","GTTTTTTTCAAGACTA",2,34.78,6.24,-4.59,0.57,1.5,1.15,0.02,">1 nonsynonymous","C6F P7F D90V N110V",4
"lib2","SARS-CoV-2","TAAAAAAAAAACCCCA",4,14.26,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N1V G83L K94V N107S T201G",5
"lib2","SARS-CoV-2","TAAAAAAAAAGCATAC",4,19.55,8.7,-2.13,0.22,1.69,1.17,0.02,">1 nonsynonymous","P7I S41N N64Y D97F F156I S184Y K198P",7
"lib2","SARS-CoV-2","TAAAAAAAAGGCACAG",12,208.96,9.69,-1.15,0.05,2.75,1.04,0,">1 nonsynonymous","S41T Y123N",2
"lib2","SARS-CoV-2","TAAAAAAAAGTATGCG",2,2.42,NA,NA,NA,NA,NA,NA,"stop","G9R E10G N13P R27H P82L Q176* V182F",7
"lib2","SARS-CoV-2","TAAAAAAAAGTCCTTA",7,0.41,NA,NA,NA,NA,NA,NA,"stop","K48* R124S",2
"lib2","SARS-CoV-2","TAAAAAAAATAAATCA",5,57.74,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N1H F44I Y91S G155V Y175N",5
"lib2","SARS-CoV-2","TAAAAAAAATTTTTGT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A K87R C102P K198P",4
"lib2","SARS-CoV-2","TAAAAAAACATATATA",5,97.13,9.06,-1.78,0.07,2.82,1.1,0,">1 nonsynonymous","I142Y E154W",2
"lib2","SARS-CoV-2","TAAAAAAACCTACCTG",11,0,NA,NA,NA,NA,NA,NA,"stop","A22* V65S R136N",3
"lib2","SARS-CoV-2","TAAAAAAACTAATCTG",1,11.66,10.75,-0.08,0.07,2.83,1.19,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","TAAAAAAAGGGGACGC",2,7.31,10.59,-0.24,0.07,2.99,1,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TAAAAAAAGGTAAATT",4,2.95,NA,NA,NA,NA,NA,NA,"stop","P82* N157S",2
"lib2","SARS-CoV-2","TAAAAAAATAAAACTC",14,131.45,8.22,-2.61,0.12,2.01,1.08,0.01,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","TAAAAAAATAAATTCT",13,109.4,9.83,-1.01,0.07,2.19,1.02,0,">1 nonsynonymous","L5Y A14L K26N",3
"lib2","SARS-CoV-2","TAAAAAAATATGGTAA",11,236.16,10.42,-0.41,0.03,2.93,1.03,0,">1 nonsynonymous","T3S R16Q A33S K48T",4
"lib2","SARS-CoV-2","TAAAAAAATGTAACAA",7,58.71,10.83,0,0.05,3,1,0,">1 nonsynonymous","N64Y G152N",2
"lib2","SARS-CoV-2","TAAAAAAATTCACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V37Y L60* K94S",3
"lib2","SARS-CoV-2","TAAAAAAATTCTTAAT",9,77.37,11.06,0.23,0.05,2.98,1.02,0,">1 nonsynonymous","K48R Q163L",2
"lib2","SARS-CoV-2","TAAAAAAATTTGCAAG",1,0.96,NA,NA,NA,NA,NA,NA,"stop","Q84* D112R",2
"lib2","SARS-CoV-2","TAAAAAACAACGAGAT",10,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110L E141S",2
"lib2","SARS-CoV-2","TAAAAAACACAATGAC",3,64.91,8.42,-2.42,0.08,2.29,1.01,0,">1 nonsynonymous","G9S Y119V Q144I",3
"lib2","SARS-CoV-2","TAAAAAACGACCCGTC",6,0.07,NA,NA,NA,NA,NA,NA,"stop","A67F W106M C150* Y175L S184T T201I",6
"lib2","SARS-CoV-2","TAAAAAACGATACAAT",2,53.61,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F99S D112N Y178N",3
"lib2","SARS-CoV-2","TAAAAAACGCAAATAG",2,12.67,6.27,-4.56,0.71,1.5,1.06,0.03,">1 nonsynonymous","Y91K G101C G117R Y159R",4
"lib2","SARS-CoV-2","TAAAAAACGTTAGAGA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","TAAAAAACTACCGAGG",5,3.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84C D98C",2
"lib2","SARS-CoV-2","TAAAAAACTCTTACTG",7,95.89,10.01,-0.82,0.09,2.4,1.01,0,">1 nonsynonymous","A14R R25H",2
"lib2","SARS-CoV-2","TAAAAAACTTTTCAGC",1,21.94,10.76,-0.08,0.06,3,1,0,"1 nonsynonymous","D59M",1
"lib2","SARS-CoV-2","TAAAAAAGAAAAACAT",8,44.01,6,-4.84,2,3,1.17,0,">1 nonsynonymous","T55L E76K F99R F167A",4
"lib2","SARS-CoV-2","TAAAAAAGACACTTTT",3,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123V Q176I",2
"lib2","SARS-CoV-2","TAAAAAAGATATACAC",3,17.28,10.76,-0.08,0.05,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAAAGCATCAGGC",2,9.32,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I2A N107A",2
"lib2","SARS-CoV-2","TAAAAAAGCTAAAAAA",12,212.34,10.08,-0.75,0.05,2.77,1,0,">1 nonsynonymous","C61S N107G",2
"lib2","SARS-CoV-2","TAAAAAAGCTTAAATT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M Y35A D68T G174L R179C",5
"lib2","SARS-CoV-2","TAAAAAAGGAAATCAA",2,30.15,10.8,-0.04,0.07,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAAAGGAGATGAT",15,249.28,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8A R25I S36F",3
"lib2","SARS-CoV-2","TAAAAAAGTATACTAT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","Q144* N157D",2
"lib2","SARS-CoV-2","TAAAAAATAAAATTCT",13,155.66,10.07,-0.76,0.03,2.88,1.03,0,">1 nonsynonymous","I2C C61S I104M G116F N130A",5
"lib2","SARS-CoV-2","TAAAAAATAAAGCAGC",2,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G I72V W106R",3
"lib2","SARS-CoV-2","TAAAAAATAACAACAA",1,18.17,6,-4.84,2,3,1.03,0,">1 nonsynonymous","T15Y N30D S43F L131W",4
"lib2","SARS-CoV-2","TAAAAAATAAGACAAA",3,24.13,10.56,-0.28,0.06,2.85,1.1,0,"1 nonsynonymous","A81M",1
"lib2","SARS-CoV-2","TAAAAAATACGACTTT",12,91.8,9.32,-1.52,0.07,1.87,1.08,0,">1 nonsynonymous","K94F F160S",2
"lib2","SARS-CoV-2","TAAAAAATAGAAGTTA",21,52.67,6.42,-4.41,0.46,1.5,1.17,0.02,">1 nonsynonymous","N13G S139Y Y178Q A190C",4
"lib2","SARS-CoV-2","TAAAAAATATCCTGGG",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S Q84H L111F K128A",4
"lib2","SARS-CoV-2","TAAAAAATCAAAAAAA",6,153.3,10.34,-0.5,0.04,2.91,1.04,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","TAAAAAATCACCCATC",10,83.35,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L5T V103Y Y119R",3
"lib2","SARS-CoV-2","TAAAAAATCCACCATT",4,90.01,9.32,-1.52,0.04,2.94,1.09,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","TAAAAAATCCATACAA",7,127.59,10.28,-0.56,0.03,2.85,1.06,0,">1 nonsynonymous","L5V N120L",2
"lib2","SARS-CoV-2","TAAAAAATCGATCCTC",2,70.22,9.86,-0.98,0.07,2.37,1.04,0,">1 nonsynonymous","N13S S36I",2
"lib2","SARS-CoV-2","TAAAAAATCTTGTAAC",1,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M A33L N58F Y121E Q176L",5
"lib2","SARS-CoV-2","TAAAAAATGAGCGAAC",6,35.31,6.21,-4.62,1.12,1.5,1.21,0.07,">1 nonsynonymous","A42D R127G V181W",3
"lib2","SARS-CoV-2","TAAAAAATGCGAAGAT",4,115.3,10.31,-0.52,0.04,2.8,1.09,0,">1 nonsynonymous","A14K S184K",2
"lib2","SARS-CoV-2","TAAAAAATTATCTAAA",1,2.71,NA,NA,NA,NA,NA,NA,"stop","G51S I104Y Y175*",3
"lib2","SARS-CoV-2","TAAAAAATTGCTTAAT",5,185.91,8.27,-2.57,0.12,2.2,1.07,0.01,">1 nonsynonymous","Y35R F126R",2
"lib2","SARS-CoV-2","TAAAAAATTGGTACCA",12,227.42,10.15,-0.69,0.07,2.64,1.03,0,">1 nonsynonymous","V52N A67L",2
"lib2","SARS-CoV-2","TAAAAACAAAATTCGG",17,179,8.1,-2.74,0.14,1.5,1.15,0.01,">1 nonsynonymous","C6A T55H S69F K94R T148A",5
"lib2","SARS-CoV-2","TAAAAACAAACGTTAA",7,143.44,8.16,-2.68,0.12,1.99,1.1,0.01,">1 nonsynonymous","N40R N107L",2
"lib2","SARS-CoV-2","TAAAAACAAAGCAGAC",13,5.37,NA,NA,NA,NA,NA,NA,"stop","F44M I142K G166* V173P",4
"lib2","SARS-CoV-2","TAAAAACAAATGAGAG",5,0,NA,NA,NA,NA,NA,NA,"stop","S41* P54A L60M",3
"lib2","SARS-CoV-2","TAAAAACAACTGGCTG",6,48.95,9.83,-1,0.06,2.14,1.04,0,">1 nonsynonymous","A81Y T100R",2
"lib2","SARS-CoV-2","TAAAAACAAGTGGCCA",12,10.09,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","T3I R25S C61V G117K",4
"lib2","SARS-CoV-2","TAAAAACAATACACAC",9,67.7,10.8,-0.03,0.04,2.98,1.04,0,"1 nonsynonymous","V37Y",1
"lib2","SARS-CoV-2","TAAAAACACCTAAATA",11,84.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4I Y119D L125N F156W Y165P N171H",6
"lib2","SARS-CoV-2","TAAAAACAGAAAACTC",14,44.1,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y35N P82Y F99E A105W Q168I",5
"lib2","SARS-CoV-2","TAAAAACATAGAAAAA",4,82.2,10.77,-0.06,0.04,2.95,1.06,0,"1 nonsynonymous","V153G",1
"lib2","SARS-CoV-2","TAAAAACATCTGTCTA",7,4.92,NA,NA,NA,NA,NA,NA,"stop","I2* G86N E154S",3
"lib2","SARS-CoV-2","TAAAAACATGTAGAAC",1,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45G D59F I88T P96K C102F",5
"lib2","SARS-CoV-2","TAAAAACATTTACAGG",3,113.19,8.79,-2.05,0.11,1.8,1.21,0,">1 nonsynonymous","A18G C31D E76D P149K",4
"lib2","SARS-CoV-2","TAAAAACCAAAAATAT",16,287.53,10.68,-0.15,0.02,2.96,1.04,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","TAAAAACCAAAGAAAA",2,18.96,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","F44V N107K R124T P169R",4
"lib2","SARS-CoV-2","TAAAAACCATACGCGA",10,171.19,6,-4.84,2,3,1.1,0,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","TAAAAACCCACATATC",3,8.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86Y P96Q W106L",3
"lib2","SARS-CoV-2","TAAAAACCCCAAAATT",2,35.36,9.71,-1.13,0.05,2.99,1.03,0,"1 nonsynonymous","P169G",1
"lib2","SARS-CoV-2","TAAAAACCGTTATTTA",2,38.56,10.94,0.1,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAACGACTTTCAT",5,7.89,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C102R G146M",2
"lib2","SARS-CoV-2","TAAAAACGAGAAAACA",10,36.56,9.25,-1.58,0.38,1.5,1,0.06,">1 nonsynonymous","T3G A67T F167Y",3
"lib2","SARS-CoV-2","TAAAAACGCTAGTAAT",1,25,7.41,-3.43,0.25,1.5,1.11,0.02,">1 nonsynonymous","L57S R73S G83S",3
"lib2","SARS-CoV-2","TAAAAACGGGACGACG",2,40.37,8.19,-2.65,0.15,1.65,1.14,0.01,">1 nonsynonymous","G86T T201I",2
"lib2","SARS-CoV-2","TAAAAACTAACCCTTC",14,86.7,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D112V N120K P133T A190M",4
"lib2","SARS-CoV-2","TAAAAACTAGTTGTAT",2,22.3,9.25,-1.58,0.11,2.01,1.03,0.01,">1 nonsynonymous","P7H P54G N107R",3
"lib2","SARS-CoV-2","TAAAAACTATCCATTT",7,160.09,10.8,-0.03,0.04,2.93,1.08,0,"1 nonsynonymous","D90Q",1
"lib2","SARS-CoV-2","TAAAAACTGATTAGGA",2,48.12,10.63,-0.21,0.09,2.83,1.13,0,">1 nonsynonymous","A42G G116R",2
"lib2","SARS-CoV-2","TAAAAACTTCGTCCAA",4,101.39,10.52,-0.31,0.05,2.92,1.08,0,">1 nonsynonymous","D97N G155S",2
"lib2","SARS-CoV-2","TAAAAAGAAAAAGTCA",14,179.25,10.77,-0.07,0.05,2.93,1.08,0,">1 nonsynonymous","L5W D90N",2
"lib2","SARS-CoV-2","TAAAAAGAAACTAGTC",2,5.89,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91L A105V G166R",3
"lib2","SARS-CoV-2","TAAAAAGAAATAGTTT",7,408.46,9.82,-1.02,0.03,2.87,1.02,0,">1 nonsynonymous","K56F A145I",2
"lib2","SARS-CoV-2","TAAAAAGAATATTAAG",2,0.07,NA,NA,NA,NA,NA,NA,"stop","C49* E135W P149D",3
"lib2","SARS-CoV-2","TAAAAAGACATAGTTG",4,75.95,8.2,-2.64,0.33,1.5,1.02,0.04,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","TAAAAAGACTAGATCT",1,9.39,6,-4.84,2,1.5,1.07,0.05,">1 nonsynonymous","N13R R25C F62G",3
"lib2","SARS-CoV-2","TAAAAAGAGGAGAGAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5R N40T I142E K199*",4
"lib2","SARS-CoV-2","TAAAAAGAGGTTCCTT",5,23.23,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","Y91F V103Y",2
"lib2","SARS-CoV-2","TAAAAAGATAAAAAGT",1,5.95,6,-4.84,2,1.5,1.08,0.05,">1 nonsynonymous","N64C P82I Y93E K132E",4
"lib2","SARS-CoV-2","TAAAAAGCACAATAAG",11,75.81,10.72,-0.11,0.03,3,1.02,0,"1 nonsynonymous","C61P",1
"lib2","SARS-CoV-2","TAAAAAGCACCACGGA",1,178.98,10.47,-0.36,0.04,2.94,1.04,0,"1 nonsynonymous","K87L",1
"lib2","SARS-CoV-2","TAAAAAGCACCATGCA",5,57,10.73,-0.11,0.05,2.95,1.07,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","TAAAAAGCCTGTGGAG",1,11.66,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","N110I R127S R136G",3
"lib2","SARS-CoV-2","TAAAAAGCCTTTAAAT",12,126.71,6.04,-4.8,0.74,1.5,1.18,0.01,">1 nonsynonymous","S139R C150R",2
"lib2","SARS-CoV-2","TAAAAAGCTATCCCAA",4,81.16,10.4,-0.43,0.06,2.94,1.06,0,">1 nonsynonymous","P54A V77M",2
"lib2","SARS-CoV-2","TAAAAAGCTCAATACT",1,55.85,10.32,-0.51,0.04,2.97,1.03,0,">1 nonsynonymous","N64R N120I Y143F",3
"lib2","SARS-CoV-2","TAAAAAGCTTAGACAT",5,0,NA,NA,NA,NA,NA,NA,"stop","C6* T170V",2
"lib2","SARS-CoV-2","TAAAAAGGATTACAGA",3,44.38,10.86,0.03,0.07,3,1.04,0,"1 nonsynonymous","N1Q",1
"lib2","SARS-CoV-2","TAAAAAGGGTCGCGCT",10,147.73,10.9,0.07,0.05,2.92,1.08,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","TAAAAAGGTACCTACA",9,82.98,9.22,-1.61,0.09,2.39,1.06,0,">1 nonsynonymous","L122E E135N G174L",3
"lib2","SARS-CoV-2","TAAAAAGTAAAAAGCT",6,118.33,10.28,-0.55,0.04,2.88,1.05,0,">1 nonsynonymous","A14Q T100R I138G",3
"lib2","SARS-CoV-2","TAAAAAGTACACAAAT",5,1.57,NA,NA,NA,NA,NA,NA,"stop","R27W S45* C61F A81S",4
"lib2","SARS-CoV-2","TAAAAAGTACATCAAT",8,86.9,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C61T P96M F167E",3
"lib2","SARS-CoV-2","TAAAAAGTCAATTACC",10,0.28,NA,NA,NA,NA,NA,NA,"stop","C6G A14* D68K",3
"lib2","SARS-CoV-2","TAAAAAGTCACATCAC",1,18.67,6.73,-4.11,0.64,1.5,1.1,0.05,">1 nonsynonymous","F47M G83D D98P W106K",4
"lib2","SARS-CoV-2","TAAAAAGTCACCTTCA",3,157.96,10.75,-0.09,0.04,2.96,1.06,0,"1 nonsynonymous","D98E",1
"lib2","SARS-CoV-2","TAAAAAGTGTTAAACT",4,90.53,10.88,0.05,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAAGTTACGCCCA",4,9.34,9.03,-1.81,0.4,1.5,1,0.07,">1 nonsynonymous","A42L P96F T201D",3
"lib2","SARS-CoV-2","TAAAAAGTTGAATATT",1,8.35,6.21,-4.62,0.73,3,1.47,0.03,">1 nonsynonymous","T3V N58D T63D L162E",4
"lib2","SARS-CoV-2","TAAAAAGTTTTAGCTG",1,27.09,10.7,-0.13,0.04,2.9,1.12,0,">1 nonsynonymous","R27N K128A",2
"lib2","SARS-CoV-2","TAAAAATAAACCCGGT",6,61.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17K L38I Y93N N107C G116S F156T",6
"lib2","SARS-CoV-2","TAAAAATAAACTTGAC",7,20.71,7.48,-3.35,0.41,1.5,1,0.04,">1 nonsynonymous","S45R G51I",2
"lib2","SARS-CoV-2","TAAAAATAAGGTATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* R25K N92Y N107R",4
"lib2","SARS-CoV-2","TAAAAATACCATGAGC",3,14.59,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","A14Y G101A",2
"lib2","SARS-CoV-2","TAAAAATACTTTACCT",4,14.27,10.7,-0.13,0.08,3,1.01,0,"1 nonsynonymous","F62D",1
"lib2","SARS-CoV-2","TAAAAATAGAGGAAAG",4,13.57,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15N P177M F185T",3
"lib2","SARS-CoV-2","TAAAAATATCCTAATA",5,7.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F70I S108L R136W",3
"lib2","SARS-CoV-2","TAAAAATCACCGGACA",4,11.72,6,-4.84,2,3,1.01,0,">1 nonsynonymous","N40T F126P E135P T201V",4
"lib2","SARS-CoV-2","TAAAAATCAGCAGGAC",5,117.46,10.29,-0.54,0.05,2.85,1.04,0,">1 nonsynonymous","I104A V173C",2
"lib2","SARS-CoV-2","TAAAAATCATCTAAGC",2,18.04,8.99,-1.84,0.13,2.11,1,0.01,">1 nonsynonymous","L5C F12M K87R P96D",4
"lib2","SARS-CoV-2","TAAAAATCCTGAAATG",3,0.58,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TAAAAATCGATCCGCT",1,21.25,8.18,-2.65,0.16,2.03,1.13,0.01,">1 nonsynonymous","G117N R136V",2
"lib2","SARS-CoV-2","TAAAAATCGGAGAAAC",2,113.14,10.38,-0.46,0.04,2.82,1.09,0,"1 nonsynonymous","A22W",1
"lib2","SARS-CoV-2","TAAAAATCTAATGGAA",1,15.11,6.3,-4.53,1.88,3,1.12,0.01,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","TAAAAATCTGCAGTCC",2,23.12,10.79,-0.04,0.06,2.84,1.17,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","TAAAAATGAAGCACTC",5,57.18,10.79,-0.04,0.08,2.82,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAATGAATCCTGA",15,144.08,9.37,-1.46,0.04,1.9,1.07,0,">1 nonsynonymous","C31R S36I T63K P96S",4
"lib2","SARS-CoV-2","TAAAAATGTCAATCTA",4,19.17,10.47,-0.36,0.07,2.82,1.14,0.01,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","TAAAAATGTCGAATAT",1,1.87,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAATGTTTTAGGG",7,130.36,8.21,-2.62,0.11,2.5,1.07,0,">1 nonsynonymous","F17V Y119S",2
"lib2","SARS-CoV-2","TAAAAATTAGGGATCG",4,60.26,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D112P Y119W",2
"lib2","SARS-CoV-2","TAAAAATTATACAGCT",4,70.19,10.21,-0.62,0.07,2.78,1.05,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","TAAAAATTTCTCAAAC",10,29.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C61T I80G K132T",3
"lib2","SARS-CoV-2","TAAAACAAAGCCAAAA",9,66.29,6,-4.84,0.79,1.5,1.17,0.01,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","TAAAACAAATAGATGT",1,0.62,NA,NA,NA,NA,NA,NA,"stop","C6V F62* S69I P96H T140N F156V L162G",7
"lib2","SARS-CoV-2","TAAAACAACCATCAAT",5,11.4,6,-4.84,2,1.5,1.08,0.04,">1 nonsynonymous","R16K S43L G101T N171D",4
"lib2","SARS-CoV-2","TAAAACAAGTGAATAA",1,11.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10K G86R P191L",3
"lib2","SARS-CoV-2","TAAAACAAGTTTCCAG",5,1.8,NA,NA,NA,NA,NA,NA,"stop","R73Q V115* L188*",3
"lib2","SARS-CoV-2","TAAAACAAGTTTTAAC",6,71.36,9.79,-1.05,0.05,2.12,1.04,0,">1 nonsynonymous","F62Q F185R",2
"lib2","SARS-CoV-2","TAAAACAATTCACCCA",2,21.05,10.48,-0.35,0.05,2.9,1.07,0,">1 nonsynonymous","Y35M D90N D98M",3
"lib2","SARS-CoV-2","TAAAACAATTGATAGT",14,140.25,9.44,-1.4,0.13,1.5,1.06,0.01,">1 nonsynonymous","L131S P149E T201R",3
"lib2","SARS-CoV-2","TAAAACAATTGGATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L G9S I28E L38S K87A S129Y",6
"lib2","SARS-CoV-2","TAAAACACATGTCGCG",4,32.71,10.82,-0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAACACGATAAACA",3,45.04,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D98M F167G",2
"lib2","SARS-CoV-2","TAAAACACTAGCATTG",2,0.48,NA,NA,NA,NA,NA,NA,"stop","S69*",1
"lib2","SARS-CoV-2","TAAAACACTTCCTAGC",9,71.37,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","L5E C31L A81R T85L Y121S",5
"lib2","SARS-CoV-2","TAAAACAGATACTGCG",4,11.53,10.38,-0.45,0.16,2.21,1,0.01,">1 nonsynonymous","N1Y Q84L Q144E",3
"lib2","SARS-CoV-2","TAAAACAGCACATACC",3,9.75,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","S41K Y50S D98F F134Y",4
"lib2","SARS-CoV-2","TAAAACAGGAGTTCCT",10,135.88,10.32,-0.52,0.03,2.94,1.08,0,">1 nonsynonymous","K114W G174L",2
"lib2","SARS-CoV-2","TAAAACAGGTAATCGC",7,153.89,6.88,-3.96,0.16,1.5,1.11,0,">1 nonsynonymous","F8L V37R C150S",3
"lib2","SARS-CoV-2","TAAAACAGTAATAAAC",7,86.77,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V37E L95S Y175I",3
"lib2","SARS-CoV-2","TAAAACAGTATGATAA",5,20.89,8.09,-2.75,0.26,1.62,1.19,0.02,">1 nonsynonymous","T15F D59V D98E F156R",4
"lib2","SARS-CoV-2","TAAAACAGTGATTCAC",9,56.3,6.23,-4.6,0.5,1.5,1.21,0.01,">1 nonsynonymous","F8V V52A F62L A89T P191F",5
"lib2","SARS-CoV-2","TAAAACATAACACTTT",2,18.36,6.39,-4.45,0.75,1.5,1.05,0.05,">1 nonsynonymous","Y91V F99S F126N Y175R",4
"lib2","SARS-CoV-2","TAAAACATAATCCACA",1,33.54,10.06,-0.78,0.12,2.75,1.01,0.01,">1 nonsynonymous","S45A D75N K128F",3
"lib2","SARS-CoV-2","TAAAACATAGAAAATA",4,52.23,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5T F99S G155D",3
"lib2","SARS-CoV-2","TAAAACATAGGGTGGC",3,77.71,10.8,-0.04,0.04,3,1.02,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","TAAAACATATACAGAT",1,9.97,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G86K L131P S139F",3
"lib2","SARS-CoV-2","TAAAACATCAGAATTG",2,53.77,10.78,-0.05,0.06,2.86,1.17,0,"1 nonsynonymous","N110R",1
"lib2","SARS-CoV-2","TAAAACATCTAATGCT",15,213.65,10.26,-0.57,0.04,2.78,1.06,0,">1 nonsynonymous","N24C N110V",2
"lib2","SARS-CoV-2","TAAAACATGAACAAAT",4,38.93,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","D68M T85Q Y123G D137W",4
"lib2","SARS-CoV-2","TAAAACATTGTTGTCC",4,34.14,10.74,-0.1,0.04,2.93,1.09,0,"1 nonsynonymous","K198M",1
"lib2","SARS-CoV-2","TAAAACCAAATCACAA",1,8.22,8.04,-2.8,0.3,1.5,1.06,0.02,">1 nonsynonymous","L60V F99V",2
"lib2","SARS-CoV-2","TAAAACCAATACAAAA",4,10.21,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Q168T V182P",2
"lib2","SARS-CoV-2","TAAAACCACTAATGTA",5,25.05,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63L D90Y S139F",3
"lib2","SARS-CoV-2","TAAAACCACTGGTAGA",4,6.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S I104R",2
"lib2","SARS-CoV-2","TAAAACCAGAACTAAG",6,25.13,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","P54Y R73T K94W",3
"lib2","SARS-CoV-2","TAAAACCAGATGTGCG",2,11.99,9.07,-1.77,0.35,1.57,1.22,0.04,">1 nonsynonymous","C61V W106G",2
"lib2","SARS-CoV-2","TAAAACCATGTGTAAG",18,249.43,10.87,0.04,0.05,2.85,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAACCCAGCTGTCG",4,40.97,8.61,-2.22,0.13,2.6,1.04,0,">1 nonsynonymous","T3D D90L F156L V173G",4
"lib2","SARS-CoV-2","TAAAACCCCCAATAAC",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54R N118G L125R",3
"lib2","SARS-CoV-2","TAAAACCCCGCAACAG",18,380.67,8.39,-2.44,0.12,2.93,1.06,0.01,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","TAAAACCCCGTTAGCA",6,38.87,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","D98G N120G F167C",3
"lib2","SARS-CoV-2","TAAAACCCTCAGAAAA",1,12.16,10.97,0.13,0.08,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAACCCTCATACGC",10,34.15,6.46,-4.38,0.94,1.5,1.19,0.07,">1 nonsynonymous","G9L Y50T F62E I104C L122Q C158H",6
"lib2","SARS-CoV-2","TAAAACCCTGCGCGAA",3,58.86,10.8,-0.04,0.05,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAACCCTTGACAAA",3,51.07,10.2,-0.64,0.04,3,1.04,0,">1 nonsynonymous","S53K K87Q",2
"lib2","SARS-CoV-2","TAAAACCGAAATCTAC",7,66.08,6.72,-4.12,0.48,1.5,1.24,0.03,">1 nonsynonymous","R127E F160V",2
"lib2","SARS-CoV-2","TAAAACCGTCAAGTCC",10,264.6,9.79,-1.05,0.06,2.25,1.06,0,">1 nonsynonymous","Y35I D59N V77L W106N Q168R",5
"lib2","SARS-CoV-2","TAAAACCTAAGAACAT",6,87.71,10.78,-0.05,0.04,2.97,1.05,0,"1 nonsynonymous","L131V",1
"lib2","SARS-CoV-2","TAAAACCTAATACTAA",5,133.39,10.52,-0.32,0.02,2.94,1.06,0,">1 nonsynonymous","C61W K128R",2
"lib2","SARS-CoV-2","TAAAACCTACACGTAG",4,182.66,10.39,-0.45,0.03,2.87,1.08,0,">1 nonsynonymous","L5Q L60V N120F",3
"lib2","SARS-CoV-2","TAAAACCTATAAAATC",9,148.41,10.79,-0.04,0.04,2.97,1.04,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","TAAAACCTCGCGAGTA",14,104.83,10.32,-0.52,0.03,2.89,1.08,0,">1 nonsynonymous","L5G D98Q G152K",3
"lib2","SARS-CoV-2","TAAAACCTCGGTAAAA",7,126.49,10.77,-0.06,0.05,2.92,1.07,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","TAAAACCTTCCAACGT",2,5.44,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89E I104L W106L F160N",4
"lib2","SARS-CoV-2","TAAAACGAACGATATG",7,109.18,10.64,-0.19,0.03,2.98,1.03,0,">1 nonsynonymous","T55S V77L S164Y T201R",4
"lib2","SARS-CoV-2","TAAAACGAACTTTTCT",7,72.17,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7F D90V R136H",3
"lib2","SARS-CoV-2","TAAAACGACACATTAA",6,71.89,9.8,-1.04,0.06,2.98,1.06,0,">1 nonsynonymous","T55D F126L G174T",3
"lib2","SARS-CoV-2","TAAAACGACATTCTCT",1,12.86,9.68,-1.16,0.21,2.1,1.1,0.02,">1 nonsynonymous","F12I S53L F62I N107P",4
"lib2","SARS-CoV-2","TAAAACGACGCCATAT",3,13.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D D97N C150L",3
"lib2","SARS-CoV-2","TAAAACGAGTGGGTGT",5,17.72,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","P82W N130Y I138L",3
"lib2","SARS-CoV-2","TAAAACGATAGCAATT",7,72.13,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F8T F44T C61G G116T S129L F134K P149A Q163E",8
"lib2","SARS-CoV-2","TAAAACGCACAACAAG",13,134.27,10.5,-0.34,0.03,2.87,1.1,0,">1 nonsynonymous","R16I E141F K198M",3
"lib2","SARS-CoV-2","TAAAACGCTACTATTT",10,5.89,NA,NA,NA,NA,NA,NA,"stop","A33W K114* I142S",3
"lib2","SARS-CoV-2","TAAAACGGGATCACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64S I88Q D97L G166K",4
"lib2","SARS-CoV-2","TAAAACGGGCATTTCT",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V G83V D90W",3
"lib2","SARS-CoV-2","TAAAACGTCATCAAAA",2,43.25,9.28,-1.56,0.12,1.78,1,0.01,">1 nonsynonymous","C49I K132N A192S",3
"lib2","SARS-CoV-2","TAAAACTAACACAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","C61* P197Q",2
"lib2","SARS-CoV-2","TAAAACTAACGACCTG",5,46.81,9.39,-1.44,0.12,1.79,1.2,0.01,">1 nonsynonymous","F47Y L57R",2
"lib2","SARS-CoV-2","TAAAACTACAACAGTC",12,4.08,NA,NA,NA,NA,NA,NA,"stop","K26* L60P K94* D98V T140M L162N S184F",7
"lib2","SARS-CoV-2","TAAAACTACCCTACTG",3,93.13,7.85,-2.99,0.12,1.96,1.1,0,">1 nonsynonymous","K87A G146I",2
"lib2","SARS-CoV-2","TAAAACTAGATGATAT",2,7.49,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C102N Y119L K199M",3
"lib2","SARS-CoV-2","TAAAACTAGCGATATA",1,6.56,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","A33W F70S W106C",3
"lib2","SARS-CoV-2","TAAAACTGAAAATCAA",3,17.73,8.55,-2.29,0.17,2.01,1.16,0.01,">1 nonsynonymous","F12C T63E Q84G F156R",4
"lib2","SARS-CoV-2","TAAAACTGTGCGACGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26M P54S Y165S",3
"lib2","SARS-CoV-2","TAAAACTTACGACACC",2,9.19,NA,NA,NA,NA,NA,NA,"stop","L5G W23* D98R P149N",4
"lib2","SARS-CoV-2","TAAAACTTATACCATG",3,10.95,10.21,-0.63,0.2,2.47,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAAACTTGTTTTATA",2,22.98,10.12,-0.72,0.12,2.61,1,0.01,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","TAAAAGAAACTCTCCA",4,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K C61V F156L F167T",4
"lib2","SARS-CoV-2","TAAAAGAAACTTAAGA",6,1.07,NA,NA,NA,NA,NA,NA,"stop","S41* P82A T85M K94Y G174Y",5
"lib2","SARS-CoV-2","TAAAAGAAATGTGTCG",1,1.42,NA,NA,NA,NA,NA,NA,"stop","N13R G51Y A81G D98* V115Y S147G T170G T201I",8
"lib2","SARS-CoV-2","TAAAAGAACTCGAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N24R V180*",2
"lib2","SARS-CoV-2","TAAAAGAAGAAAACGG",5,161.82,10.21,-0.62,0.03,2.95,1.02,0,">1 nonsynonymous","T15P G116V",2
"lib2","SARS-CoV-2","TAAAAGAATTAGATAA",2,12.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A14C L131E",2
"lib2","SARS-CoV-2","TAAAAGAATTGCGAAC",13,0.05,NA,NA,NA,NA,NA,NA,"stop","N1K R16T N64* A89S S113L G146I",6
"lib2","SARS-CoV-2","TAAAAGACCAACTATG",2,31.76,9.89,-0.95,0.08,2.94,1.08,0,"1 nonsynonymous","Y143W",1
"lib2","SARS-CoV-2","TAAAAGACCAGCATGC",6,46.71,10.72,-0.11,0.04,2.97,1.04,0,">1 nonsynonymous","S29V S184H",2
"lib2","SARS-CoV-2","TAAAAGACCATATACA",7,72.7,8.37,-2.47,0.13,1.98,1.09,0.01,">1 nonsynonymous","D112V P169Q",2
"lib2","SARS-CoV-2","TAAAAGACGATTCTGC",4,18.3,10.72,-0.12,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAGACTTCCGTGT",3,49.5,10.58,-0.25,0.04,2.97,1.03,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","TAAAAGAGAATTTGCA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V S45A Y50G D98G Q168K",5
"lib2","SARS-CoV-2","TAAAAGAGCCCGGCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y G86L",2
"lib2","SARS-CoV-2","TAAAAGAGGTAGTACA",5,17.27,9.5,-1.33,0.25,1.61,1.07,0.03,">1 nonsynonymous","S41A F70Y",2
"lib2","SARS-CoV-2","TAAAAGAGGTTTTACA",11,87.38,7.91,-2.93,0.12,1.5,1.1,0.01,">1 nonsynonymous","C61G S113E T201N",3
"lib2","SARS-CoV-2","TAAAAGAGTTCAACGA",9,28.96,10.11,-0.72,0.11,2.43,1.09,0,">1 nonsynonymous","T3K D34F",2
"lib2","SARS-CoV-2","TAAAAGATAAATACTT",11,45.48,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S41L V103N G174V",3
"lib2","SARS-CoV-2","TAAAAGATAGAGCTGG",1,4.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H V115L E135V T201W",4
"lib2","SARS-CoV-2","TAAAAGATATATCACC",8,4.35,NA,NA,NA,NA,NA,NA,"stop","A18K T55I F126*",3
"lib2","SARS-CoV-2","TAAAAGATATCCCAAC",2,19.34,8.08,-2.76,0.11,2,1,0.01,">1 nonsynonymous","F70Y N130K A145D",3
"lib2","SARS-CoV-2","TAAAAGATCTCAGAAA",7,49.3,10.76,-0.08,0.06,2.92,1.09,0,">1 nonsynonymous","Y35F D59I T201M",3
"lib2","SARS-CoV-2","TAAAAGATGCGAGGCC",3,14.76,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6N C158F",2
"lib2","SARS-CoV-2","TAAAAGATTCTCTTAG",2,50.91,10.22,-0.62,0.05,2.86,1,0,">1 nonsynonymous","R78L L122Q Q144I",3
"lib2","SARS-CoV-2","TAAAAGATTGGATGGC",3,47.03,10.83,0,0.02,2.91,1.08,0,"1 nonsynonymous","Y39F",1
"lib2","SARS-CoV-2","TAAAAGCAAAACCAAG",2,6.27,10.66,-0.18,0.06,2.98,1.01,0,"1 nonsynonymous","V32S",1
"lib2","SARS-CoV-2","TAAAAGCAACTATATA",2,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R E10R D97L N118A T140P C150R Q163I",7
"lib2","SARS-CoV-2","TAAAAGCAATTGGGAA",12,102.33,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55P K132L L162P",3
"lib2","SARS-CoV-2","TAAAAGCACGCTATTC",5,64.88,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G86W D98T G117V",3
"lib2","SARS-CoV-2","TAAAAGCAGCAGAAAT",1,31.97,6.12,-4.71,1.96,1.5,1.22,0.07,">1 nonsynonymous","N64T G74L N92S N107E G117L",5
"lib2","SARS-CoV-2","TAAAAGCAGCTATCGC",4,0,NA,NA,NA,NA,NA,NA,"stop","R25N A81G V103G N120* F167L",5
"lib2","SARS-CoV-2","TAAAAGCAGGTCTTGT",6,127.95,10.54,-0.3,0.07,2.83,1.07,0,">1 nonsynonymous","G9F D90R",2
"lib2","SARS-CoV-2","TAAAAGCCCATTACGG",1,55.86,10.85,0.02,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAGCCTTATATAA",6,94.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25G P96L V115Q",3
"lib2","SARS-CoV-2","TAAAAGCGCGAGTGAA",1,27.79,9.31,-1.53,0.06,2.95,1.06,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TAAAAGCTAACTTAAT",5,30.38,10.84,0.01,0.06,3,1.02,0,"1 nonsynonymous","F99W",1
"lib2","SARS-CoV-2","TAAAAGCTAGTTAATT",4,17.35,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A22R C49V S69Q",3
"lib2","SARS-CoV-2","TAAAAGCTCGAAATGG",6,74.4,6,-4.84,1.71,3,1.17,0.01,">1 nonsynonymous","A22T D112Y Y165Q",3
"lib2","SARS-CoV-2","TAAAAGCTTATTGGCC",5,98.68,10.85,0.02,0.07,2.88,1.05,0,"1 nonsynonymous","K128H",1
"lib2","SARS-CoV-2","TAAAAGCTTTGTAAAT",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85V R136L F167H K199T",4
"lib2","SARS-CoV-2","TAAAAGGACATAATTT",16,181.57,9.25,-1.58,0.06,2.92,1.08,0,">1 nonsynonymous","N4K Y119G T148I",3
"lib2","SARS-CoV-2","TAAAAGGACCAAGACG",2,18.8,10.87,0.03,0.06,2.96,1.06,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","TAAAAGGACCGATACG",3,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L C61P T85C D112A F134T",5
"lib2","SARS-CoV-2","TAAAAGGATAAAATAG",2,8.31,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","R25L A67S D97N K132L Y165G",5
"lib2","SARS-CoV-2","TAAAAGGATGAAAAGG",7,104.08,10.87,0.03,0.06,2.95,1.05,0,">1 nonsynonymous","N120Q T201N",2
"lib2","SARS-CoV-2","TAAAAGGCATACCACC",3,109.16,10.87,0.03,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAGGCCGCCCATT",6,127.5,8.24,-2.59,0.1,2.67,1.04,0,">1 nonsynonymous","L95M P149A Y159M",3
"lib2","SARS-CoV-2","TAAAAGGCTAAACACA",1,63.74,10.82,-0.01,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAGGCTCACAAAA",8,119.67,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F17N Y66P I142E",3
"lib2","SARS-CoV-2","TAAAAGGGGTCACAAT",9,99.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R27A K94F N120G R136S",4
"lib2","SARS-CoV-2","TAAAAGGTACTGGAAC",10,192.48,10.9,0.07,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAAGGTATTTACCT",15,111.98,10.67,-0.17,0.05,2.94,1.06,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","TAAAAGTAAATTAGCG",6,92.14,10.35,-0.49,0.04,2.88,1.04,0,">1 nonsynonymous","T3N R16S S41G P149I",4
"lib2","SARS-CoV-2","TAAAAGTAAATTTATT",1,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Q A105V L122F Y165T",4
"lib2","SARS-CoV-2","TAAAAGTAATATGTTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24T V77C G83S A105N T170Q Y175C",6
"lib2","SARS-CoV-2","TAAAAGTACGAGTAAC",12,179.53,8.85,-1.99,0.1,1.5,1.07,0,">1 nonsynonymous","D34K F134I",2
"lib2","SARS-CoV-2","TAAAAGTACTGCCTTA",2,12.43,10.75,-0.08,0.11,2.94,1.09,0.01,"1 nonsynonymous","T140H",1
"lib2","SARS-CoV-2","TAAAAGTAGAAAATCA",14,90.23,8.26,-2.58,0.24,1.5,1.13,0.03,">1 nonsynonymous","F12Q L57V",2
"lib2","SARS-CoV-2","TAAAAGTAGAACAGCT",5,153.25,10.73,-0.11,0.05,2.88,1.05,0,">1 nonsynonymous","T85M V173L",2
"lib2","SARS-CoV-2","TAAAAGTATGTTTCTG",6,17.49,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C102Q F126M G152V",3
"lib2","SARS-CoV-2","TAAAAGTCCACCTTAT",4,66.26,10.69,-0.15,0.04,2.95,1.05,0,">1 nonsynonymous","E141L T201S",2
"lib2","SARS-CoV-2","TAAAAGTCCCAGTGAA",8,43.3,6,-4.84,1.61,3,1.19,0,">1 nonsynonymous","K94T C158T",2
"lib2","SARS-CoV-2","TAAAAGTCCGCTCGAA",3,34.4,8.56,-2.27,0.16,1.5,1.13,0.01,">1 nonsynonymous","L5T P149R L162R",3
"lib2","SARS-CoV-2","TAAAAGTGACTCGGAC",26,250.79,9.96,-0.87,0.06,2.26,1.04,0,">1 nonsynonymous","T3L I28L N58I T100W",4
"lib2","SARS-CoV-2","TAAAAGTGAGACTATG",5,47.1,7.36,-3.47,0.48,1.5,1,0.06,">1 nonsynonymous","G9Q Y35K C49T K56G G86L",5
"lib2","SARS-CoV-2","TAAAAGTTAAGCACTT",2,10.15,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","F62P C150A",2
"lib2","SARS-CoV-2","TAAAAGTTAATATATT",2,25.42,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","S41R A67H A89N P169R",4
"lib2","SARS-CoV-2","TAAAAGTTCCTTCTGG",2,48.94,10.67,-0.16,0.05,2.93,1.04,0,"1 nonsynonymous","S45G",1
"lib2","SARS-CoV-2","TAAAAGTTCTCGCGCT",4,75.63,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V32S L38A A81S F134L",4
"lib2","SARS-CoV-2","TAAAAGTTCTTAATAA",16,149.69,10.07,-0.77,0.05,2.65,1.07,0,">1 nonsynonymous","A22R Y66E",2
"lib2","SARS-CoV-2","TAAAAGTTCTTCTGCA",5,146.2,10.84,0.01,0.06,2.92,1.09,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","TAAAAGTTGTATTAAA",4,19.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N120S G172M",2
"lib2","SARS-CoV-2","TAAAAGTTTTTAATAA",9,4.55,NA,NA,NA,NA,NA,NA,"stop","V37K T55K D68* V103M",4
"lib2","SARS-CoV-2","TAAAATAAACAACACG",1,6.31,10.81,-0.03,0.09,3,1,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","TAAAATAAAGAGAACA",2,44.19,8.48,-2.36,0.13,2.68,1.04,0.01,">1 nonsynonymous","Y119T A145V P161A V173I",4
"lib2","SARS-CoV-2","TAAAATAAAGGAGATT",5,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E Y143Q L183N",3
"lib2","SARS-CoV-2","TAAAATAAATGATTAT",6,1.16,NA,NA,NA,NA,NA,NA,"stop","N4D V11F N58C Y119A R136*",5
"lib2","SARS-CoV-2","TAAAATAAATGTAACT",36,255.25,9.86,-0.97,0.07,2.27,1.02,0,"1 nonsynonymous","V11Q",1
"lib2","SARS-CoV-2","TAAAATAACAAATAAA",1,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P K94Q G146E",3
"lib2","SARS-CoV-2","TAAAATAACAGTTATA",4,20.55,10.96,0.12,0.11,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAATAACATATTCC",1,29.16,8.8,-2.03,0.07,2.99,1.04,0,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","TAAAATAACCCGAAAA",4,20.97,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9E K56G C158H P177G",4
"lib2","SARS-CoV-2","TAAAATAAGAGCAATC",3,26.77,7.5,-3.33,0.3,1.88,1.16,0.03,">1 nonsynonymous","K48R V71E Y121W",3
"lib2","SARS-CoV-2","TAAAATAAGCGTTCAA",6,111.5,10.75,-0.09,0.03,2.92,1.09,0,">1 nonsynonymous","A42F E154S",2
"lib2","SARS-CoV-2","TAAAATAATAGGAATT",6,0.14,NA,NA,NA,NA,NA,NA,"stop","T15Y Y39* D90A P177G",4
"lib2","SARS-CoV-2","TAAAATAATATTATTG",3,0.56,NA,NA,NA,NA,NA,NA,"stop","I2T N64* A105N F134S N157Y",5
"lib2","SARS-CoV-2","TAAAATAATATTTTTT",5,5.77,NA,NA,NA,NA,NA,NA,"stop","C6D K56W G83* N107Y",4
"lib2","SARS-CoV-2","TAAAATAATTAATCGT",4,17.71,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","P149M F167G",2
"lib2","SARS-CoV-2","TAAAATAATTTTGGCT",7,31.12,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99N Y165Q N171T",3
"lib2","SARS-CoV-2","TAAAATACAAGCACTA",3,11.33,9.85,-0.98,0.1,2.44,1.03,0.01,">1 nonsynonymous","L57Y V65F P149R",3
"lib2","SARS-CoV-2","TAAAATACAAGGCAAG",3,12.26,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","N4K A14T Y91V Y119M G152Q Q163G",6
"lib2","SARS-CoV-2","TAAAATACAGCATAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D L57C F70M Y123G I142F F185S",6
"lib2","SARS-CoV-2","TAAAATACATAAAAAG",17,207.45,8.85,-1.98,0.2,1.5,1.01,0.02,">1 nonsynonymous","L5E A105K",2
"lib2","SARS-CoV-2","TAAAATACATAGAAAC",3,15.72,9.6,-1.24,0.29,1.5,1,0.06,">1 nonsynonymous","Y50R A105S",2
"lib2","SARS-CoV-2","TAAAATACGAAGATCC",11,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77E K87M S129E I142S",4
"lib2","SARS-CoV-2","TAAAATACGTAAGTAT",1,9.23,10.78,-0.05,0.11,2.86,1.19,0,">1 nonsynonymous","D97F S147T P197T",3
"lib2","SARS-CoV-2","TAAAATACGTACAATA",6,52.11,10.83,-0.01,0.05,2.95,1.04,0,">1 nonsynonymous","V52F D59R Y123K",3
"lib2","SARS-CoV-2","TAAAATACTAAAATTA",4,2.26,NA,NA,NA,NA,NA,NA,"stop","A89* F99D N118Q",3
"lib2","SARS-CoV-2","TAAAATACTTAAACTT",10,114.26,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","TAAAATAGAGAATTAA",5,58.85,10.12,-0.72,0.06,2.87,1.11,0,">1 nonsynonymous","L5Y C31M",2
"lib2","SARS-CoV-2","TAAAATAGAGTTCATC",3,11.31,10.64,-0.2,0.07,2.88,1.05,0,">1 nonsynonymous","P54L D90L D98N",3
"lib2","SARS-CoV-2","TAAAATAGCAGTGTTT",1,23.45,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S129L C158A S184C",3
"lib2","SARS-CoV-2","TAAAATAGCCTCACAA",7,187.88,8.15,-2.69,0.15,2,1.07,0.01,">1 nonsynonymous","N4M S45Y G83N G117S",4
"lib2","SARS-CoV-2","TAAAATAGGCATTGTT",2,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F D90S V103M",3
"lib2","SARS-CoV-2","TAAAATAGTACATTAT",5,81.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10V D59P I80L L95N G155H K198V",6
"lib2","SARS-CoV-2","TAAAATAGTGAAAAGC",3,33.31,10.83,0,0.08,2.82,1.17,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","TAAAATAGTGTCAAAC",9,130.14,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L162R T170K G172V",3
"lib2","SARS-CoV-2","TAAAATATAAAGGAAA",5,38.8,10.3,-0.54,0.05,2.93,1.07,0,">1 nonsynonymous","K128C P149T",2
"lib2","SARS-CoV-2","TAAAATATAAATAGAG",1,9.92,10.66,-0.18,0.1,2.94,1,0.01,">1 nonsynonymous","N1S K128Y T148Y",3
"lib2","SARS-CoV-2","TAAAATATAACACAGA",10,114.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4A S139N Q144P F167W G174H",5
"lib2","SARS-CoV-2","TAAAATATAATCATAA",10,38.1,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","I72S F99M S113W N157S",4
"lib2","SARS-CoV-2","TAAAATATGATGTCAA",2,34.92,10.56,-0.27,0.07,2.9,1.12,0,"1 nonsynonymous","T15N",1
"lib2","SARS-CoV-2","TAAAATATGGTTACTC",6,71.6,10,-0.84,0.08,2.67,1.03,0,">1 nonsynonymous","Q84N G116N P149A",3
"lib2","SARS-CoV-2","TAAAATATTAAGGCCA",13,130.18,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C6G R27Q C31I L38S T148L C158I",6
"lib2","SARS-CoV-2","TAAAATATTATTAGTG",2,75.37,9.57,-1.27,0.04,1.89,1.04,0,">1 nonsynonymous","D34R G51Q",2
"lib2","SARS-CoV-2","TAAAATATTGAGGTGT",3,42.59,10.86,0.03,0.06,2.79,1.22,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","TAAAATCAAAACAACG",6,72.67,10.76,-0.08,0.05,2.93,1.09,0,">1 nonsynonymous","C61N T100I",2
"lib2","SARS-CoV-2","TAAAATCAACGGTATG",2,64.29,10.17,-0.67,0.07,2.51,1.04,0,">1 nonsynonymous","F134G V173S",2
"lib2","SARS-CoV-2","TAAAATCACAAAAACC",2,7.03,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R25L K56Y",2
"lib2","SARS-CoV-2","TAAAATCACTTCCAGG",4,15.76,10.69,-0.15,0.09,2.81,1.23,0,"1 nonsynonymous","A190D",1
"lib2","SARS-CoV-2","TAAAATCATGGCATAT",12,75.4,6.58,-4.25,0.47,1.5,1.19,0.03,">1 nonsynonymous","C6K G51E V52L",3
"lib2","SARS-CoV-2","TAAAATCCAAAAAAAC",6,146.41,10.57,-0.27,0.03,2.95,1.05,0,">1 nonsynonymous","C61L L95V",2
"lib2","SARS-CoV-2","TAAAATCCACGAAGCC",13,3.29,NA,NA,NA,NA,NA,NA,"stop","V103* R124H T140V G166I",4
"lib2","SARS-CoV-2","TAAAATCCAGCGCAAC",9,345.3,10.89,0.06,0.06,2.98,1.04,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","TAAAATCCATACAAAC",4,11.48,6.75,-4.09,0.62,1.5,1.24,0.06,">1 nonsynonymous","A14G V77S",2
"lib2","SARS-CoV-2","TAAAATCCGGCTAAAG",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L V103E",2
"lib2","SARS-CoV-2","TAAAATCCTTAAGGGG",1,26.06,7.8,-3.04,0.19,1.5,1,0.02,">1 nonsynonymous","T3W T46I C61M I138C Y159M",5
"lib2","SARS-CoV-2","TAAAATCCTTCTGAGA",3,76.64,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","TAAAATCGAAGACAAG",10,302.81,10.52,-0.31,0.04,2.89,1.06,0,">1 nonsynonymous","A14G V153A",2
"lib2","SARS-CoV-2","TAAAATCGAAGTTGGA",4,122.13,10.84,0,0.05,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAAATCGAATAATAG",4,49.54,10.83,-0.01,0.06,2.96,1.07,0,">1 nonsynonymous","A42M T201L",2
"lib2","SARS-CoV-2","TAAAATCGAGACGCCT",5,35.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3D I28R V103A S139R N157V",5
"lib2","SARS-CoV-2","TAAAATCGCATACACT",1,14.69,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C6S S45V G146R",3
"lib2","SARS-CoV-2","TAAAATCGGAGCCATT",9,136.67,8.72,-2.11,0.08,2.77,1.12,0,">1 nonsynonymous","T15A V115M Y119M",3
"lib2","SARS-CoV-2","TAAAATCGGAGCTCTC",17,176.31,10.84,0,0.04,2.96,1.05,0,"1 nonsynonymous","T46S",1
"lib2","SARS-CoV-2","TAAAATCTAACGCATC",1,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V N130I",2
"lib2","SARS-CoV-2","TAAAATCTATAGCAAA",5,4.25,NA,NA,NA,NA,NA,NA,"stop","T55F P82* Y91L S139L P149S",5
"lib2","SARS-CoV-2","TAAAATCTCCAGAAAG",1,0.23,NA,NA,NA,NA,NA,NA,"stop","F12N C31S D98* E141I",4
"lib2","SARS-CoV-2","TAAAATCTCTTAGGAA",10,76.87,6.34,-4.49,0.56,1.5,1.2,0.02,"1 nonsynonymous","A81P",1
"lib2","SARS-CoV-2","TAAAATCTGTTGCCAT",5,60.85,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","G51V Y159N A192L",3
"lib2","SARS-CoV-2","TAAAATCTTAAAAAAA",3,30.96,10.42,-0.41,0.05,2.91,1.05,0,">1 nonsynonymous","A33T K56I S129N",3
"lib2","SARS-CoV-2","TAAAATCTTAGGAAAT",3,30.49,6.76,-4.07,0.42,1.5,1.1,0.03,">1 nonsynonymous","R25A F62N K114N T201L",4
"lib2","SARS-CoV-2","TAAAATGAAACTGACA",5,138.74,8.76,-2.07,0.11,1.92,1.12,0,">1 nonsynonymous","S45Y N64M P177A",3
"lib2","SARS-CoV-2","TAAAATGAAAGACACT",11,166.52,9.22,-1.62,0.05,2.99,1.06,0,">1 nonsynonymous","L122N Q168I",2
"lib2","SARS-CoV-2","TAAAATGAACACAGAC",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Q Y66R",2
"lib2","SARS-CoV-2","TAAAATGAACTGCCTT",3,56.16,6.48,-4.36,0.69,1.5,1.26,0.04,">1 nonsynonymous","L5R L95S",2
"lib2","SARS-CoV-2","TAAAATGAAGTGAAGC",4,47.17,9.08,-1.76,0.19,1.63,1.06,0.02,">1 nonsynonymous","T55S N64V D137E G152R",4
"lib2","SARS-CoV-2","TAAAATGAATATTGCC",6,73.28,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A81D F99Y Y119M",3
"lib2","SARS-CoV-2","TAAAATGACATACATT",1,21.79,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G9Y S69P Y123L",3
"lib2","SARS-CoV-2","TAAAATGAGAGAAGTA",4,52.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6F C31T N64P G86Y",4
"lib2","SARS-CoV-2","TAAAATGAGCTAGAGG",4,30.85,6.46,-4.37,0.44,1.5,1.08,0.03,">1 nonsynonymous","P7T P96M L122G K198M",4
"lib2","SARS-CoV-2","TAAAATGAGTTAAGGA",4,37.31,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","F8K V32R P161K V194I",4
"lib2","SARS-CoV-2","TAAAATGCACAAATAA",2,70.74,10.67,-0.17,0.04,2.96,1.02,0,">1 nonsynonymous","L5R A14S",2
"lib2","SARS-CoV-2","TAAAATGCATTCCCAA",3,24.96,9.67,-1.17,0.12,1.98,1.06,0.01,">1 nonsynonymous","T46S G51M A145V A190Y P197H",5
"lib2","SARS-CoV-2","TAAAATGCCGGGAAAC",10,49.28,7.52,-3.32,0.48,1.5,1.25,0.06,">1 nonsynonymous","V11N A89W A105N K128R S147L T170L",6
"lib2","SARS-CoV-2","TAAAATGGCTAATCGT",1,24.39,6,-4.84,2,3,1.07,0,">1 nonsynonymous","D90G F167Q",2
"lib2","SARS-CoV-2","TAAAATGGCTTGAAAG",4,47.4,10.03,-0.81,0.09,2.62,1.05,0,"1 nonsynonymous","S19M",1
"lib2","SARS-CoV-2","TAAAATGGTTTGGCGC",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35G V37G A81S N157W",4
"lib2","SARS-CoV-2","TAAAATGTAAGAAGGC",7,20.33,9.45,-1.39,0.22,1.54,1.2,0.02,">1 nonsynonymous","N1Y D98S S139F",3
"lib2","SARS-CoV-2","TAAAATGTAGAAACTA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","G117Q P169R S184*",3
"lib2","SARS-CoV-2","TAAAATGTGCATAGAG",9,94.78,8.81,-2.03,0.05,2.77,1.07,0,">1 nonsynonymous","C6N K56L F156Q",3
"lib2","SARS-CoV-2","TAAAATGTGTGGAACG",8,12.72,NA,NA,NA,NA,NA,NA,"stop","A14C F47* N64W",3
"lib2","SARS-CoV-2","TAAAATGTGTTACATA",5,68.1,6,-4.84,0.84,1.5,1.08,0,">1 nonsynonymous","L60S P149C L162S Q176W",4
"lib2","SARS-CoV-2","TAAAATGTTGGATCCG",5,26.54,10.87,0.04,0.07,2.83,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAAATGTTTAGCAAC",2,84.9,9.65,-1.19,0.07,1.83,1.11,0,">1 nonsynonymous","F12S S36L",2
"lib2","SARS-CoV-2","TAAAATTAAACAGTAA",2,51.68,9.45,-1.39,0.06,2.89,1.12,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TAAAATTAATATAGGT",2,6.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25W C61A A89Y L95P G101L R179V",6
"lib2","SARS-CoV-2","TAAAATTACTGCCCAC",4,43.64,8.96,-1.87,0.09,1.79,1.08,0,">1 nonsynonymous","N30Q F44R D90A",3
"lib2","SARS-CoV-2","TAAAATTAGCAATTAG",3,0.33,NA,NA,NA,NA,NA,NA,"stop","V115* Y175L",2
"lib2","SARS-CoV-2","TAAAATTAGTAAGTTA",5,88.87,10.66,-0.18,0.03,2.99,1.01,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","TAAAATTATAGAGGGA",2,47.73,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","N92L",1
"lib2","SARS-CoV-2","TAAAATTATAGCCCCC",7,31.67,6,-4.84,2,3,1.17,0.01,"1 nonsynonymous","D68R",1
"lib2","SARS-CoV-2","TAAAATTATTTCCATC",20,363.12,10.85,0.01,0.04,2.94,1.07,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","TAAAATTCAAAATAAA",1,32.82,10.75,-0.09,0.08,2.79,1.11,0,">1 nonsynonymous","A22T L122G",2
"lib2","SARS-CoV-2","TAAAATTCAAACACTA",4,61.64,10.85,0.01,0.03,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAATTCAAACGCGC",5,17.39,8.1,-2.74,0.27,1.5,1.05,0.02,">1 nonsynonymous","D34P Q84T Y121F I138F",4
"lib2","SARS-CoV-2","TAAAATTCAATACGAG",6,27.73,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V20A Y50M",2
"lib2","SARS-CoV-2","TAAAATTCCCATCAAC",3,50.35,10.84,0.01,0.05,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAAATTCCTCGCTTT",3,26.11,8.75,-2.09,0.2,1.52,1.08,0.01,">1 nonsynonymous","T100G F160V P169T",3
"lib2","SARS-CoV-2","TAAAATTCGCAGCGAA",4,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W K56L K94G",3
"lib2","SARS-CoV-2","TAAAATTGAAAAATCA",3,15.8,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A33H K48N I72L L162G Q168L",5
"lib2","SARS-CoV-2","TAAAATTGCAGGATGC",6,402.26,10.83,-0.01,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAATTGCCAGCTCT",14,109.1,6.88,-3.95,0.38,1.5,1.18,0.02,">1 nonsynonymous","C61S C150H",2
"lib2","SARS-CoV-2","TAAAATTGGGCAGGAC",4,51.26,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","N92H V103I Y119Q S139I G166S",5
"lib2","SARS-CoV-2","TAAAATTGTCCTAACG",2,12.82,9.4,-1.44,0.13,2.21,1.03,0.01,">1 nonsynonymous","A81E D90T T148F L187T",4
"lib2","SARS-CoV-2","TAAAATTTACTACATA",5,29.91,10.75,-0.09,0.06,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAAATTTAGATAGTT",2,32.51,9.65,-1.19,0.14,1.94,1.03,0.01,">1 nonsynonymous","L5M L162Y",2
"lib2","SARS-CoV-2","TAAAATTTAGGCCATA",16,57.65,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K87Y Y93C F99L I142F Q144L G155H",6
"lib2","SARS-CoV-2","TAAAATTTCCCGTTAG",10,130.78,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9Q F47L D59S G86V",4
"lib2","SARS-CoV-2","TAAAATTTCGACCGCC",2,16.66,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","K114F P133V G146V",3
"lib2","SARS-CoV-2","TAAAATTTGAAATAGC",3,3.2,NA,NA,NA,NA,NA,NA,"stop","A42* K94T A105G T170F",4
"lib2","SARS-CoV-2","TAAAATTTTTACGAAG",9,44.03,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4K A18T L95N S147N L162P",5
"lib2","SARS-CoV-2","TAAAATTTTTGCTAAG",1,24.81,9.81,-1.03,0.11,2.39,1.05,0.01,">1 nonsynonymous","L57K N151T V173K",3
"lib2","SARS-CoV-2","TAAACAAAAACTATGC",17,167.66,9.91,-0.93,0.04,2.41,1.06,0,">1 nonsynonymous","K128R P133C K199E",3
"lib2","SARS-CoV-2","TAAACAAAAGTTGTTA",4,42.07,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51N A89F F160A T170L",4
"lib2","SARS-CoV-2","TAAACAAACAACTACA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* P96R R136G",3
"lib2","SARS-CoV-2","TAAACAAACACCAAAA",7,17.96,7.21,-3.63,0.25,1.5,1.29,0.01,">1 nonsynonymous","T15W L60A A67Y",3
"lib2","SARS-CoV-2","TAAACAAAGACAACTG",2,31.93,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19T S41T F62K R73A",4
"lib2","SARS-CoV-2","TAAACAAAGTCCTAAT",1,21.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D90Y L95T Y121M H189Y",4
"lib2","SARS-CoV-2","TAAACAAATAAGATAA",4,95.28,10.66,-0.18,0.05,2.94,1.07,0,">1 nonsynonymous","L60F N130L",2
"lib2","SARS-CoV-2","TAAACAAATAGGGATA",8,129.06,10.55,-0.29,0.03,2.99,1.02,0,">1 nonsynonymous","V37P C61I E141T",3
"lib2","SARS-CoV-2","TAAACAAATAGTAGCC",2,11.7,8.72,-2.11,0.1,1.95,1.04,0,"1 nonsynonymous","Y50L",1
"lib2","SARS-CoV-2","TAAACAACAAATACGA",2,0,NA,NA,NA,NA,NA,NA,"stop","R73I K94L I142S K199*",4
"lib2","SARS-CoV-2","TAAACAACCAAAAACA",11,150.82,8.39,-2.44,0.08,2.8,1.05,0,">1 nonsynonymous","E141P N157M",2
"lib2","SARS-CoV-2","TAAACAACGCGACAAA",3,55.32,10.34,-0.49,0.06,2.84,1.13,0,">1 nonsynonymous","A33C T55F D59A",3
"lib2","SARS-CoV-2","TAAACAACTAGTCAAA",2,46.99,6,-4.84,2,1.89,1.15,0,">1 nonsynonymous","K48S F70N L122K F167W",4
"lib2","SARS-CoV-2","TAAACAACTCCCGAAC",3,32.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C102S Y123M Q144S Y165V Y175K",5
"lib2","SARS-CoV-2","TAAACAACTGCTACTA",3,1.02,NA,NA,NA,NA,NA,NA,"stop","A89G E154*",2
"lib2","SARS-CoV-2","TAAACAAGAACTAAAT",9,128.38,7.57,-3.26,0.21,1.5,1.05,0.01,">1 nonsynonymous","S36F K87N L95V P96T",4
"lib2","SARS-CoV-2","TAAACAAGACGTATAA",5,47.54,9.54,-1.3,0.14,1.71,1.07,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","TAAACAAGATCAATAG",3,84.41,8.97,-1.87,0.05,2.82,1.08,0,"1 nonsynonymous","G146C",1
"lib2","SARS-CoV-2","TAAACAAGCGTGTCTA",3,31.48,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","S19T S45V Y66S G101T T170E",5
"lib2","SARS-CoV-2","TAAACAAGGCGAACAT",2,8.35,10.61,-0.22,0.07,3,1,0,">1 nonsynonymous","Y35M A42L T193I",3
"lib2","SARS-CoV-2","TAAACAAGGGCTAAAA",3,8.66,6,-4.84,2,1.5,1.02,0.04,">1 nonsynonymous","G51I A89L S139H T170K",4
"lib2","SARS-CoV-2","TAAACAATAAAACGAA",6,38.76,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D34Y Y35C G86D K94F G146A",5
"lib2","SARS-CoV-2","TAAACAATACATAAAA",4,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I G74D N120L C158F",4
"lib2","SARS-CoV-2","TAAACAATCACCAACC",1,66.94,7.18,-3.65,0.07,1.86,1.05,0,"1 nonsynonymous","C150E",1
"lib2","SARS-CoV-2","TAAACAATCGCTGCAT",5,38.26,6.19,-4.64,1.13,1.5,1.24,0.05,">1 nonsynonymous","Y50M Y91F V103T",3
"lib2","SARS-CoV-2","TAAACAATCGTCACCG",4,32.91,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G51I D90M W106C C158Y",4
"lib2","SARS-CoV-2","TAAACAATGGACTGCA",1,29.44,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","L5P Y35D Y50S S139D",4
"lib2","SARS-CoV-2","TAAACAATTATATACT",1,0.38,NA,NA,NA,NA,NA,NA,"stop","R27* W106A",2
"lib2","SARS-CoV-2","TAAACAATTGGAAAGA",2,19.26,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","T46F C102W K128N A145P",4
"lib2","SARS-CoV-2","TAAACAATTGTCGCTA",3,0.53,NA,NA,NA,NA,NA,NA,"stop","D98T G117L G166* P177K",4
"lib2","SARS-CoV-2","TAAACACAACCACTGC",2,12.28,10.6,-0.24,0.07,2.95,1.03,0,">1 nonsynonymous","S41C K56M",2
"lib2","SARS-CoV-2","TAAACACAATGCGCAT",2,13.31,10.86,0.03,0.04,3,1.01,0,">1 nonsynonymous","R27N K128A",2
"lib2","SARS-CoV-2","TAAACACACCAACTTG",9,85.19,9.58,-1.25,0.05,2.16,1.02,0,">1 nonsynonymous","D59E V65L R73K A105I L122T",5
"lib2","SARS-CoV-2","TAAACACAGCTAAAGT",2,15.36,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S43D C49L K56E W106P",4
"lib2","SARS-CoV-2","TAAACACATAGATCCC",13,35.69,6.81,-4.03,0.58,1.5,1.27,0.05,"1 nonsynonymous","Y50G",1
"lib2","SARS-CoV-2","TAAACACATAGGTTAA",5,140.26,9.84,-1,0.08,2.14,1.07,0,">1 nonsynonymous","N1T D59E S129I Y178I",4
"lib2","SARS-CoV-2","TAAACACATGATGCAG",5,2.07,NA,NA,NA,NA,NA,NA,"stop","K48* L125R",2
"lib2","SARS-CoV-2","TAAACACCATTAAAAC",3,17.78,8.73,-2.1,0.4,1.5,1,0.07,">1 nonsynonymous","S36W F47R E135S",3
"lib2","SARS-CoV-2","TAAACACCCCTACTAA",1,8.14,10.85,0.02,0.08,2.97,1.04,0,">1 nonsynonymous","V32L T55R N130L",3
"lib2","SARS-CoV-2","TAAACACCGCTATAAC",2,16.13,10.74,-0.1,0.13,2.94,1,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TAAACACCGCTTTCAT",17,339.97,10.7,-0.13,0.04,2.95,1.07,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","TAAACACCGGCCCGAG",9,176.97,10.49,-0.34,0.03,2.92,1.03,0,">1 nonsynonymous","S53M G83A",2
"lib2","SARS-CoV-2","TAAACACCTCAACTTA",10,0.64,NA,NA,NA,NA,NA,NA,"stop","T63* F134S T140L H189L",4
"lib2","SARS-CoV-2","TAAACACGATTACAAG",26,406.08,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","I28M V37C F99V Y119H F134S",5
"lib2","SARS-CoV-2","TAAACACGGCTTCAAT",3,92.32,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G152D G172R",2
"lib2","SARS-CoV-2","TAAACACGGTATTGCT",4,15.12,6,-4.84,2,3,1.16,0.03,">1 nonsynonymous","P96R V103K C150V T201V",4
"lib2","SARS-CoV-2","TAAACACGTTAAAGCC",4,17.61,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15N S43T P96N S108T L162W",5
"lib2","SARS-CoV-2","TAAACACGTTTAAATT",7,1.53,NA,NA,NA,NA,NA,NA,"stop","N4* A14V T100R",3
"lib2","SARS-CoV-2","TAAACACTAAAATACA",2,17.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R27K T85D P96N F99V Y119A",5
"lib2","SARS-CoV-2","TAAACACTGGTTCGGG",2,8.03,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","D90H A105L T148F G152C Q168A T201Y",6
"lib2","SARS-CoV-2","TAAACACTTGAAACAC",12,72.48,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S43T N92I",2
"lib2","SARS-CoV-2","TAAACACTTGTGAAGA",8,46.12,6.11,-4.73,0.53,1.5,1.15,0.01,">1 nonsynonymous","C6S T55S V103E W106F S139N N157R L183V",7
"lib2","SARS-CoV-2","TAAACAGAAACTGGCG",2,25.88,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I80W R127S",2
"lib2","SARS-CoV-2","TAAACAGAATGCAAAT",3,33.5,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5D D68G S139D",3
"lib2","SARS-CoV-2","TAAACAGACAAAAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","V153*",1
"lib2","SARS-CoV-2","TAAACAGACTAATGAT",7,81.53,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T46P R127S T170L G174T",4
"lib2","SARS-CoV-2","TAAACAGATAGCAGAA",2,17.18,10.01,-0.83,0.12,2.28,1.04,0.01,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","TAAACAGGACTTAATT",4,43.07,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V77A P96C W106G P149K R179H",5
"lib2","SARS-CoV-2","TAAACAGGCCAATTTA",4,11.23,6.41,-4.42,0.56,1.5,1.08,0.02,">1 nonsynonymous","S43P Y123L D137G",3
"lib2","SARS-CoV-2","TAAACAGGCGAAACCT",3,130.84,9.64,-1.2,0.05,2.12,1.06,0,">1 nonsynonymous","E10L F47I C61H T85M",4
"lib2","SARS-CoV-2","TAAACAGGGAGCATTG",6,64.01,7.05,-3.78,0.29,1.5,1.12,0.02,">1 nonsynonymous","L38Q P54R D68Y",3
"lib2","SARS-CoV-2","TAAACAGGTGATTAAG",1,57.96,10.69,-0.14,0.06,2.9,1.06,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","TAAACAGTAACGCCAG",3,59.26,10.85,0.02,0.04,2.89,1.12,0,">1 nonsynonymous","S36K Q168F",2
"lib2","SARS-CoV-2","TAAACAGTAGCTAAGT",7,25.2,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3M V52N I80Q P96M G152N Q163A",6
"lib2","SARS-CoV-2","TAAACAGTCACAATCT",24,11.63,NA,NA,NA,NA,NA,NA,"stop","L95W A105M T201*",3
"lib2","SARS-CoV-2","TAAACAGTCTATTCGG",3,80.55,10.6,-0.24,0.03,2.88,1.13,0,">1 nonsynonymous","V32E P54H",2
"lib2","SARS-CoV-2","TAAACAGTCTCCCCAA",1,23.75,10.83,0,0.09,2.95,1.07,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TAAACAGTGTATACTT",4,70.5,9.28,-1.56,0.06,2.75,1.1,0,">1 nonsynonymous","D97I G146R",2
"lib2","SARS-CoV-2","TAAACAGTGTTGTTCT",15,7.56,NA,NA,NA,NA,NA,NA,"stop","K198*",1
"lib2","SARS-CoV-2","TAAACAGTTAGTCTCA",1,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64S A89D I104N",3
"lib2","SARS-CoV-2","TAAACAGTTATATAAA",3,40.44,10.57,-0.27,0.06,2.97,1.04,0,">1 nonsynonymous","N1M G9R A190S",3
"lib2","SARS-CoV-2","TAAACAGTTTATTAGG",2,25.83,9.55,-1.28,0.1,2.16,1.03,0,">1 nonsynonymous","Y93F I142Y",2
"lib2","SARS-CoV-2","TAAACATAAAGAAGTA",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94T G155T",2
"lib2","SARS-CoV-2","TAAACATAATAATAAA",5,39.08,6.91,-3.93,0.29,1.5,1.1,0.02,">1 nonsynonymous","F44L N64W R73E",3
"lib2","SARS-CoV-2","TAAACATAATCCCTTA",1,32.08,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N4V S43N T140N Y178P",4
"lib2","SARS-CoV-2","TAAACATACCTTTACT",13,45.26,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D59V F167G",2
"lib2","SARS-CoV-2","TAAACATAGTCAATCA",2,30.75,6,-4.84,2,3,1.19,0,">1 nonsynonymous","T15C V77A",2
"lib2","SARS-CoV-2","TAAACATGAACAAATT",3,4.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C S200I",2
"lib2","SARS-CoV-2","TAAACATGAAGTTCAC",10,65.64,8.65,-2.19,0.07,3,1.11,0,"1 nonsynonymous","L125E",1
"lib2","SARS-CoV-2","TAAACATGACACATAC",2,38.64,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","K87A P161H Y175K",3
"lib2","SARS-CoV-2","TAAACATGATGAGAGT",1,32.66,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14S G86Y N120S F167A G174A",5
"lib2","SARS-CoV-2","TAAACATGCCTGACTG",7,54.9,8.5,-2.34,0.36,1.5,1,0.07,">1 nonsynonymous","Q84L G101L R127S G155C",4
"lib2","SARS-CoV-2","TAAACATGGACATAAA",16,92.04,6,-4.84,2,3,1.19,0,">1 nonsynonymous","G9A Y35S S41F K87N F99D V115R G152V",7
"lib2","SARS-CoV-2","TAAACATTAACTTAAG",3,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8N L57R A89C D97F N107S I142F",6
"lib2","SARS-CoV-2","TAAACATTCAATACTA",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L K26E L38F N151P",4
"lib2","SARS-CoV-2","TAAACATTGTGTGGAT",5,83.17,8.13,-2.7,0.17,2.02,1.03,0.01,">1 nonsynonymous","E10R C61E D98P Y119S T148F",5
"lib2","SARS-CoV-2","TAAACATTTAAAAAGA",3,64.33,10.44,-0.4,0.06,2.9,1.1,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","TAAACATTTAGACATC",7,81.75,10.6,-0.23,0.05,2.93,1.1,0,"1 nonsynonymous","V65A",1
"lib2","SARS-CoV-2","TAAACATTTCTTTAAA",2,10.02,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V77T P82K D90Y N107I G174T",5
"lib2","SARS-CoV-2","TAAACCAAACACAAAG",11,120.24,10.07,-0.77,0.09,2.53,1.05,0,"1 nonsynonymous","I28G",1
"lib2","SARS-CoV-2","TAAACCAAAGCCACGT",1,74.05,10.73,-0.1,0.04,3,1.03,0,">1 nonsynonymous","S29R N120S",2
"lib2","SARS-CoV-2","TAAACCAAGTAATTCA",6,15.37,6.01,-4.82,2,1.5,1.28,0.07,">1 nonsynonymous","T55N G117L I142L N151S N157H L183K",6
"lib2","SARS-CoV-2","TAAACCAATCCATCTA",3,65.29,10.61,-0.22,0.05,2.93,1.07,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","TAAACCAATTGCTTAC",8,38.62,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","N58C P149A P161C",3
"lib2","SARS-CoV-2","TAAACCACAAGTGATT",1,0.59,NA,NA,NA,NA,NA,NA,"stop","I88S L111* Y165T",3
"lib2","SARS-CoV-2","TAAACCACAGAGGTAG",6,89.98,10.86,0.02,0.05,2.95,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAACCACATAAGTAA",2,5.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R P133K I142S C150G",4
"lib2","SARS-CoV-2","TAAACCACGAAACAAT",14,90.07,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","S43N D98C D112F C150N",4
"lib2","SARS-CoV-2","TAAACCACGACTTGGT",8,33.63,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","TAAACCACTGTGATGT",29,468.17,9.99,-0.84,0.06,2.35,1.05,0,"1 nonsynonymous","A81F",1
"lib2","SARS-CoV-2","TAAACCAGACACCAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","L5S E154* L162P",3
"lib2","SARS-CoV-2","TAAACCAGATAGTATA",10,61.89,6.57,-4.27,0.44,1.5,1.14,0.02,">1 nonsynonymous","F8P V65Y G174R",3
"lib2","SARS-CoV-2","TAAACCAGATGAGCTT",7,146.93,10.29,-0.55,0.04,2.83,1.08,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TAAACCAGCCTAAATG",9,0.73,NA,NA,NA,NA,NA,NA,"stop","F17W Y93* D98Y",3
"lib2","SARS-CoV-2","TAAACCAGCCTTCGAC",6,97.36,10.77,-0.07,0.02,2.97,1.05,0,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","TAAACCAGCTTGTAAG",2,18.65,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V20K F44R P96H",3
"lib2","SARS-CoV-2","TAAACCAGGACTCATC",7,98.18,10.76,-0.08,0.04,2.95,1.08,0,">1 nonsynonymous","V77I N110G",2
"lib2","SARS-CoV-2","TAAACCAGTCAAAACC",2,12.56,10.15,-0.69,0.12,2.44,1,0.01,">1 nonsynonymous","N13G D34G",2
"lib2","SARS-CoV-2","TAAACCATAAGTAAAG",3,54.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51I G86L G116T F160W V173R",5
"lib2","SARS-CoV-2","TAAACCATTACCTAAG",5,3.63,NA,NA,NA,NA,NA,NA,"stop","D68* T100L",2
"lib2","SARS-CoV-2","TAAACCATTTAAGTCT",13,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L A81T N109L L122A V173P Y178T",6
"lib2","SARS-CoV-2","TAAACCCAAACAAACC",14,381.43,9.31,-1.53,0.05,2.29,1.09,0,">1 nonsynonymous","T3R T55I P169N S184L",4
"lib2","SARS-CoV-2","TAAACCCAATCTGGAC",12,91.83,6.07,-4.77,0.4,1.5,1.13,0,">1 nonsynonymous","F17V N107K Q144P",3
"lib2","SARS-CoV-2","TAAACCCACCAAATAT",3,3.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TAAACCCCAATCGCAA",2,3.37,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","TAAACCCCATGGTCTT",5,25.74,8.17,-2.67,0.15,1.61,1.09,0.01,">1 nonsynonymous","R16F G83E F167W",3
"lib2","SARS-CoV-2","TAAACCCCGATAAGGC",2,123.81,10.53,-0.3,0.03,2.94,1.07,0,">1 nonsynonymous","V77L Q84S T148A V173H",4
"lib2","SARS-CoV-2","TAAACCCGAAGAGAAT",8,84.21,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A89V C158T",2
"lib2","SARS-CoV-2","TAAACCCGAGGAGCAA",14,171.08,10.72,-0.12,0.04,2.98,1.03,0,">1 nonsynonymous","S36G D97P",2
"lib2","SARS-CoV-2","TAAACCCTAAAACGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","V11F I72N A81F R127* E135L",5
"lib2","SARS-CoV-2","TAAACCCTAACATATC",7,89.32,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G51I D97M T100H R124H",4
"lib2","SARS-CoV-2","TAAACCCTTACATCAT",1,32.76,9.74,-1.09,0.17,2.45,1.09,0.01,">1 nonsynonymous","C31K T100R T148N",3
"lib2","SARS-CoV-2","TAAACCGAAAGACATT",5,29.15,7.27,-3.56,0.39,1.5,1.14,0.03,">1 nonsynonymous","D112A E141S",2
"lib2","SARS-CoV-2","TAAACCGAACAATTAA",6,0.72,NA,NA,NA,NA,NA,NA,"stop","S43L T55V F99* P149S",4
"lib2","SARS-CoV-2","TAAACCGACTTATCTG",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N A67S",2
"lib2","SARS-CoV-2","TAAACCGATCGTAGTT",7,5.45,NA,NA,NA,NA,NA,NA,"stop","A14G K56C S69* F99L",4
"lib2","SARS-CoV-2","TAAACCGATGAAAAAA",7,291.56,10.2,-0.64,0.04,2.76,1.03,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","TAAACCGCAGCCATTG",14,78.61,6.16,-4.68,0.6,1.5,1.19,0.01,">1 nonsynonymous","S41V V52H T85S G146M",4
"lib2","SARS-CoV-2","TAAACCGCTAGAACAA",11,12.7,NA,NA,NA,NA,NA,NA,"stop","L38* L122R K128Y N151L F185Y",5
"lib2","SARS-CoV-2","TAAACCGCTCCGCAAA",11,315.92,10.83,-0.01,0.06,2.9,1.1,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","TAAACCGCTGAGATCA",15,230.05,9.78,-1.06,0.05,2.14,1.09,0,">1 nonsynonymous","R16L Y35V S45F A190Q",4
"lib2","SARS-CoV-2","TAAACCGGAACAATCA",1,17.71,7.13,-3.7,0.48,1.5,1,0.05,">1 nonsynonymous","F17R Y119R",2
"lib2","SARS-CoV-2","TAAACCGGCTTAATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59* G86S Y159E",3
"lib2","SARS-CoV-2","TAAACCGGTATAAAGC",1,52.95,8.38,-2.45,0.16,2.31,1.03,0.01,">1 nonsynonymous","N24A N40D G155A G166Y",4
"lib2","SARS-CoV-2","TAAACCGTGAAAAAAA",4,36.95,9.22,-1.61,0.21,1.53,1.13,0.04,">1 nonsynonymous","S45V F47L D90G",3
"lib2","SARS-CoV-2","TAAACCGTTAACCAAT",6,25.13,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","V103A N120T E135S",3
"lib2","SARS-CoV-2","TAAACCTACACAGTAT",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N W23S K56L",3
"lib2","SARS-CoV-2","TAAACCTATGGTGGAC",4,22.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K114V R127V R136T P161M",4
"lib2","SARS-CoV-2","TAAACCTCACCACCCT",9,107,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9R W23T S45A G86H T201S",5
"lib2","SARS-CoV-2","TAAACCTCTCCCATAC",10,143.26,7.24,-3.59,0.24,1.5,1.15,0.01,">1 nonsynonymous","K114N L122H R127D",3
"lib2","SARS-CoV-2","TAAACCTGACACCAAT",4,59.06,6,-4.83,1.01,1.5,1.22,0.02,">1 nonsynonymous","K94T G101R T170R",3
"lib2","SARS-CoV-2","TAAACCTTAGTCTGAC",4,70.24,10.82,-0.02,0.05,2.98,1.05,0,">1 nonsynonymous","V52F S164T",2
"lib2","SARS-CoV-2","TAAACCTTGCCACGCT",5,0.27,NA,NA,NA,NA,NA,NA,"stop","E135* T148M",2
"lib2","SARS-CoV-2","TAAACCTTGCTTATGG",8,86.79,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8K C150S",2
"lib2","SARS-CoV-2","TAAACCTTGGGCATAT",4,26.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R27F F70V N151F",3
"lib2","SARS-CoV-2","TAAACCTTTTTATAAA",6,107.94,10.86,0.03,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGAAAGCCCGTT",5,24.93,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99P C150H",2
"lib2","SARS-CoV-2","TAAACGAAATGGCGCT",5,5.16,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGAACCGACTAC",1,3.64,NA,NA,NA,NA,NA,NA,"stop","R25E L60* Q168R S184V",4
"lib2","SARS-CoV-2","TAAACGAAGAATGACA",2,5.28,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15N C49M",2
"lib2","SARS-CoV-2","TAAACGAAGCTAAGCG",15,190.03,10.83,-0.01,0.05,2.89,1.14,0,"1 nonsynonymous","T85R",1
"lib2","SARS-CoV-2","TAAACGAAGTGGGCCT",4,7.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10L P54F G101A K132S",4
"lib2","SARS-CoV-2","TAAACGACAGCCAATG",3,31.28,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56V F70L",2
"lib2","SARS-CoV-2","TAAACGACAGTGAGTC",8,97.49,10.25,-0.58,0.04,2.88,1.06,0,">1 nonsynonymous","V11F A18N",2
"lib2","SARS-CoV-2","TAAACGACATAACTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","K26A L60A D90I G152*",4
"lib2","SARS-CoV-2","TAAACGACCTAGTTTA",5,94.22,10.65,-0.18,0.04,2.94,1.05,0,">1 nonsynonymous","R16Q R27F V37N",3
"lib2","SARS-CoV-2","TAAACGACGAATCAGA",3,237.02,10.72,-0.11,0.04,2.93,1.08,0,">1 nonsynonymous","I138A T201K",2
"lib2","SARS-CoV-2","TAAACGACTATATTAC",11,2.86,NA,NA,NA,NA,NA,NA,"stop","V20Q Y93* K114R",3
"lib2","SARS-CoV-2","TAAACGAGAACGATTC",1,2.16,NA,NA,NA,NA,NA,NA,"stop","T3S E76T A81* D98G V153K",5
"lib2","SARS-CoV-2","TAAACGAGTTTTGTAT",16,160.74,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","F12V Y39V C49A F62I G83D Y119L I142P Y159F Y165W T201A",10
"lib2","SARS-CoV-2","TAAACGATATCCGACC",7,55.26,10.76,-0.07,0.07,2.88,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAACGATGAAAAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L F99H C150* N171L",4
"lib2","SARS-CoV-2","TAAACGATGACCCCAA",5,0,NA,NA,NA,NA,NA,NA,"stop","K94* G101D I104D V153N G196K",5
"lib2","SARS-CoV-2","TAAACGATGTGTAACA",4,58.98,10.19,-0.64,0.06,2.78,1.06,0,">1 nonsynonymous","T63S W106M",2
"lib2","SARS-CoV-2","TAAACGCAAAGACGGG",5,20.46,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","A67R D90A K132V G155A",4
"lib2","SARS-CoV-2","TAAACGCAATAGGGTC",11,239.63,10.14,-0.7,0.03,2.99,1.02,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","TAAACGCAATGCCGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22I S43K R73S G83T G116N Y178I",6
"lib2","SARS-CoV-2","TAAACGCATCCACGGC",19,578.33,10.81,-0.02,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGCCAACTGTAA",11,114.46,10.16,-0.67,0.07,2.64,1,0,">1 nonsynonymous","N13G L95M",2
"lib2","SARS-CoV-2","TAAACGCCTTAAAATG",10,136.1,10.82,-0.02,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGCGAAAACCTC",7,34.59,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F44S P96K F167Q",3
"lib2","SARS-CoV-2","TAAACGCGCGACGTTA",13,121.42,10.94,0.1,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGCTATCGATAT",6,0.92,NA,NA,NA,NA,NA,NA,"stop","I2N A14* S129I",3
"lib2","SARS-CoV-2","TAAACGCTGCGCCATT",8,35.58,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90I W106Q",2
"lib2","SARS-CoV-2","TAAACGCTTATTTGCG",1,5.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A Y143C V181S",3
"lib2","SARS-CoV-2","TAAACGGAACAATGCT",4,141.12,10.81,-0.02,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAACGGACAATAAAG",11,125.13,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I2P Y39G D59Y N110T E154F F167Y G174T",7
"lib2","SARS-CoV-2","TAAACGGATACGTGAA",2,5.99,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","A105L T170I",2
"lib2","SARS-CoV-2","TAAACGGCAAATGTCC",2,23.3,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","T55S R124W",2
"lib2","SARS-CoV-2","TAAACGGCAGTTATAA",7,19.65,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5M D90H F99L A105T",4
"lib2","SARS-CoV-2","TAAACGGCTATCTTTA",4,101.32,10.87,0.03,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGGGTCCACACC",10,1.06,NA,NA,NA,NA,NA,NA,"stop","A33F N40C W106*",3
"lib2","SARS-CoV-2","TAAACGGTCGTGATAA",4,0.67,NA,NA,NA,NA,NA,NA,"stop","W23* V103W Y143S",3
"lib2","SARS-CoV-2","TAAACGGTGACCGGTT",10,14.06,NA,NA,NA,NA,NA,NA,"stop","I2N S41I A105*",3
"lib2","SARS-CoV-2","TAAACGTAAAAATATC",5,29.12,10.94,0.1,0.16,2.67,1.03,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGTACTCGTATT",2,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114L R179V S184A",3
"lib2","SARS-CoV-2","TAAACGTAGGACCAAG",1,41.22,8.16,-2.67,0.15,2.35,1.05,0.01,">1 nonsynonymous","I2F C61S D97S G117K S139G",5
"lib2","SARS-CoV-2","TAAACGTAGTTTTCAT",10,101.84,10.81,-0.02,0.04,2.91,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACGTCAAATGCTG",6,0.71,NA,NA,NA,NA,NA,NA,"stop","R16D K26Q S45* I104G E141P C150S F160*",7
"lib2","SARS-CoV-2","TAAACGTCCACGCAAG",1,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60H G86L I138L",3
"lib2","SARS-CoV-2","TAAACGTCCGAGCCGT",2,22.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I88N G101L",2
"lib2","SARS-CoV-2","TAAACGTCTACCACTA",5,28.75,6.32,-4.51,0.73,1.5,1.23,0.04,">1 nonsynonymous","I2H F8S L60R T148L G152R",5
"lib2","SARS-CoV-2","TAAACGTGCCGGTAAG",9,143.73,10.19,-0.65,0.07,2.53,1.04,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","TAAACGTTAAAACAGA",5,65.25,10.16,-0.67,0.09,2.38,1.05,0,">1 nonsynonymous","A33R D97Q",2
"lib2","SARS-CoV-2","TAAACGTTTCCATTCA",2,162.24,10.83,-0.01,0.04,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAACTAACACGCCCA",6,56.37,10.29,-0.54,0.05,2.85,1.06,0,">1 nonsynonymous","D59V S184Y",2
"lib2","SARS-CoV-2","TAAACTAACTAGTGGA",8,167.05,10.84,0,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACTAAGCGTACAT",14,118.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41L S139I Q144N G155L",4
"lib2","SARS-CoV-2","TAAACTAAGTGACCTA",5,291.77,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","P177L K199R",2
"lib2","SARS-CoV-2","TAAACTAATACTTTTG",4,31.46,10.79,-0.05,0.09,2.83,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACTAATCTAGGTT",3,12.3,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6I G101S K132Y Y143I P169Y",5
"lib2","SARS-CoV-2","TAAACTAATGAAATAA",7,52.97,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T46K S69T Q84F D98L",4
"lib2","SARS-CoV-2","TAAACTAATTGATGCT",3,24.25,10.28,-0.56,0.1,2.78,1.04,0,">1 nonsynonymous","R27T K56A A89V",3
"lib2","SARS-CoV-2","TAAACTACCATTAAAT",12,107.26,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R124Y K132T",2
"lib2","SARS-CoV-2","TAAACTACCGGATCCT",10,205.1,8.99,-1.85,0.07,2.55,1.07,0,">1 nonsynonymous","E154L V173S",2
"lib2","SARS-CoV-2","TAAACTAGATGATCCG",6,22.99,10.86,0.03,0.08,2.95,1.05,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","TAAACTAGCCCACGTA",14,80.83,6.86,-3.98,0.37,1.5,1.17,0.02,">1 nonsynonymous","T100P Q168E",2
"lib2","SARS-CoV-2","TAAACTAGCCCGTAAG",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39D F160D",2
"lib2","SARS-CoV-2","TAAACTAGTAATATAA",13,272.41,9.58,-1.26,0.02,2.9,1.08,0,">1 nonsynonymous","I2E Y143V",2
"lib2","SARS-CoV-2","TAAACTAGTCACAGCA",2,15.86,6,-4.84,2,1.5,1.43,0.06,">1 nonsynonymous","C102G G166N",2
"lib2","SARS-CoV-2","TAAACTAGTTATTCCG",2,24.31,10.7,-0.14,0.05,2.91,1.11,0,">1 nonsynonymous","S41T T46I C61R",3
"lib2","SARS-CoV-2","TAAACTAGTTTTACTA",2,24.13,9.18,-1.66,0.1,2.86,1,0,">1 nonsynonymous","R73S G152C P197G",3
"lib2","SARS-CoV-2","TAAACTATAAGGCACG",9,131.94,10.43,-0.4,0.04,2.85,1.08,0,">1 nonsynonymous","K128V E141L S200M",3
"lib2","SARS-CoV-2","TAAACTATATGCCAAA",4,44.58,9.71,-1.12,0.05,2.8,1.04,0,">1 nonsynonymous","N13A G174R",2
"lib2","SARS-CoV-2","TAAACTATCACGAATC",1,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43H R136L N171C",3
"lib2","SARS-CoV-2","TAAACTATCGTAGGAA",2,6.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K S45N N64F G152P R179K",5
"lib2","SARS-CoV-2","TAAACTATGTTAATGA",4,43.44,10.8,-0.04,0.14,2.86,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAACTATTCAAACAA",1,17.05,10.72,-0.12,0.1,2.77,1.15,0,">1 nonsynonymous","S41T S200T",2
"lib2","SARS-CoV-2","TAAACTCAAAAGAAAG",7,54.19,10.68,-0.15,0.04,3,1.02,0,">1 nonsynonymous","V37R E141M",2
"lib2","SARS-CoV-2","TAAACTCAAAATTTTA",9,226.7,10.75,-0.09,0.04,2.97,1.05,0,"1 nonsynonymous","N64K",1
"lib2","SARS-CoV-2","TAAACTCAACTGGAGA",3,13.52,7.98,-2.86,0.21,1.5,1,0.03,">1 nonsynonymous","V77S S147F",2
"lib2","SARS-CoV-2","TAAACTCAAGATTGTA",13,117.09,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N92T R136K E154S Y159A Y165Q",5
"lib2","SARS-CoV-2","TAAACTCACCGCATTG",3,0.81,NA,NA,NA,NA,NA,NA,"stop","G51L T201*",2
"lib2","SARS-CoV-2","TAAACTCACCTGCCCT",8,4.35,NA,NA,NA,NA,NA,NA,"stop","L57Y R78H G83L Y93D D98N V103L F160* V173A Y178G",9
"lib2","SARS-CoV-2","TAAACTCATGACATCC",4,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104K V153L",2
"lib2","SARS-CoV-2","TAAACTCCAAAATCAC",2,57.99,8.31,-2.53,0.15,2.4,1.12,0.01,">1 nonsynonymous","S19E F156Q",2
"lib2","SARS-CoV-2","TAAACTCCAGCTTTTA",6,61.62,10.55,-0.28,0.06,2.87,1.05,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","TAAACTCCTACACAAC",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88L F160L G196T",3
"lib2","SARS-CoV-2","TAAACTCGAACTTATA",7,24.47,10.75,-0.08,0.1,2.98,1,0,"1 nonsynonymous","Y39E",1
"lib2","SARS-CoV-2","TAAACTCGACGATAAC",1,33.8,10.08,-0.75,0.07,2.53,1.11,0,">1 nonsynonymous","A81L E141D L188K",3
"lib2","SARS-CoV-2","TAAACTCGGACGCAGA",3,5.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68W I88R K94R A105H K128W",5
"lib2","SARS-CoV-2","TAAACTCGGTAGATAC",1,20.22,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","D59L Q168A Q176W E186D",4
"lib2","SARS-CoV-2","TAAACTCTAAACATTA",1,9.69,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N4F R16F D34K C49Y K56Q",5
"lib2","SARS-CoV-2","TAAACTCTAGTGTAAG",2,66.17,10.95,0.12,0.07,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAACTGAAAAGCATA",1,63,10.54,-0.3,0.04,2.88,1.08,0,">1 nonsynonymous","D59H E135D",2
"lib2","SARS-CoV-2","TAAACTGAAAGCCTCT",7,33.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2C Y66R A81H D137V V173I",5
"lib2","SARS-CoV-2","TAAACTGAACTGTTTG",3,7.94,6.4,-4.44,0.76,1.5,1,0.05,">1 nonsynonymous","G83R N107C L122H C150L F156W",5
"lib2","SARS-CoV-2","TAAACTGAATTCTGCA",13,157.67,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L60S V77I C150S",3
"lib2","SARS-CoV-2","TAAACTGACACATACA",3,0.77,NA,NA,NA,NA,NA,NA,"stop","N4Q G9E Q84* K128N",4
"lib2","SARS-CoV-2","TAAACTGATACCTAGA",1,0.61,NA,NA,NA,NA,NA,NA,"stop","V115T G116*",2
"lib2","SARS-CoV-2","TAAACTGCATTGGTCA",9,73.04,8.22,-2.62,0.39,1.5,1,0.07,">1 nonsynonymous","V77W F134N S164T",3
"lib2","SARS-CoV-2","TAAACTGCCCCAGTTA",2,82.73,10.81,-0.02,0.05,2.98,1.02,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","TAAACTGTAAAATGTT",9,175.63,9.47,-1.36,0.06,2.9,1.1,0,">1 nonsynonymous","T3A Y119S",2
"lib2","SARS-CoV-2","TAAACTGTAACATTCA",4,4.29,NA,NA,NA,NA,NA,NA,"stop","I88* P133L C150S S200I",4
"lib2","SARS-CoV-2","TAAACTGTAGGTTTGG",3,10.12,7.64,-3.2,0.22,1.53,1.03,0.01,">1 nonsynonymous","F8D Y119S E141N",3
"lib2","SARS-CoV-2","TAAACTGTCCTTTGTT",4,20.41,10.73,-0.11,0.08,2.84,1.18,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","TAAACTTAAAAATGAC",15,147.99,10.32,-0.51,0.03,2.93,1.06,0,">1 nonsynonymous","R27Q N120L E154M",3
"lib2","SARS-CoV-2","TAAACTTAAAGTAGAT",1,3.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","TAAACTTAAATTAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44I L95G G146S Q168V",4
"lib2","SARS-CoV-2","TAAACTTAATGATTCA",1,17.94,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","TAAACTTAATTCCGGT",3,133.68,9.15,-1.69,0.04,2.97,1.05,0,">1 nonsynonymous","P7D N157A",2
"lib2","SARS-CoV-2","TAAACTTAGTATATCC",3,73.02,10.9,0.06,0.04,2.94,1.07,0,">1 nonsynonymous","F62L L188P",2
"lib2","SARS-CoV-2","TAAACTTATCAAGATG",10,234.44,9.37,-1.47,0.07,2.46,1.08,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","TAAACTTCAGGTATTA",15,395.23,10.21,-0.62,0.04,2.75,1.03,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","TAAACTTCATTAAATA",14,9.67,NA,NA,NA,NA,NA,NA,"stop","D68* Y93W C150M",3
"lib2","SARS-CoV-2","TAAACTTCCACATGAA",8,107.42,10.73,-0.11,0.02,2.94,1.08,0,">1 nonsynonymous","T3S F185M",2
"lib2","SARS-CoV-2","TAAACTTCCCCACGAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M A105M L131W",3
"lib2","SARS-CoV-2","TAAACTTCCCGTGGTA",14,93.79,6.51,-4.33,0.49,1.5,1.2,0.02,">1 nonsynonymous","A14P N58V T140V C150F",4
"lib2","SARS-CoV-2","TAAACTTCCGGGGCAA",7,122.45,10.75,-0.08,0.06,2.92,1.09,0,"1 nonsynonymous","H189L",1
"lib2","SARS-CoV-2","TAAACTTCTCTAAAGT",6,25.78,10.57,-0.27,0.07,2.89,1.11,0,"1 nonsynonymous","P169S",1
"lib2","SARS-CoV-2","TAAACTTTAAGGTCCG",3,25.34,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","F99N P133S",2
"lib2","SARS-CoV-2","TAAACTTTATATAATT",3,32.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14S N58V N64L E76K",4
"lib2","SARS-CoV-2","TAAACTTTTTGTTCTG",1,25.83,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N92T P149D",2
"lib2","SARS-CoV-2","TAAAGAAAAATATACC",2,10.27,9.69,-1.14,0.11,2.48,1,0.01,">1 nonsynonymous","N1L V52I N107S",3
"lib2","SARS-CoV-2","TAAAGAAAACGTAGGG",6,21.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39M C49R",2
"lib2","SARS-CoV-2","TAAAGAAAAGATTATT",3,65.58,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S36F F47G G83D",3
"lib2","SARS-CoV-2","TAAAGAAAATCAACTA",5,78.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R16L C49Q N64C",3
"lib2","SARS-CoV-2","TAAAGAAACAACAAAA",8,97.07,9.67,-1.17,0.08,1.95,1.07,0,">1 nonsynonymous","G9V F17M A33R T201L",4
"lib2","SARS-CoV-2","TAAAGAAACACCCACA",3,25.98,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D59L T100P",2
"lib2","SARS-CoV-2","TAAAGAAACGCAACAG",4,0.3,NA,NA,NA,NA,NA,NA,"stop","G116E T148* F156V",3
"lib2","SARS-CoV-2","TAAAGAAACTAACAGT",11,229.56,9.93,-0.9,0.06,2.33,1.06,0,">1 nonsynonymous","A14Q Y35L Y50L T55M",4
"lib2","SARS-CoV-2","TAAAGAAAGAAACTCC",12,87.87,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G86H W106I",2
"lib2","SARS-CoV-2","TAAAGAAATCTAAACA",14,153.27,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D68G Y121L K128L",3
"lib2","SARS-CoV-2","TAAAGAACATTCAATA",1,1.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R W106V F156K",3
"lib2","SARS-CoV-2","TAAAGAACTTGAGACA",17,173.54,10.8,-0.03,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGAAGAAGAATCT",9,33.73,6.09,-4.75,0.6,3,1.22,0.01,">1 nonsynonymous","F8A P96L",2
"lib2","SARS-CoV-2","TAAAGAAGACTCATTA",6,39.25,10.65,-0.18,0.08,2.85,1.08,0,">1 nonsynonymous","A22D Q144S",2
"lib2","SARS-CoV-2","TAAAGAAGGAACTATG",5,77.61,10.72,-0.12,0.05,2.94,1.07,0,"1 nonsynonymous","A22K",1
"lib2","SARS-CoV-2","TAAAGAAGGAATCCAC",3,190.19,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N1P V11L A33P V52L K114Q T148E Y175L",7
"lib2","SARS-CoV-2","TAAAGAAGGGGTGGAA",6,31.44,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","W23I C61R P82D D90I N120Q",5
"lib2","SARS-CoV-2","TAAAGAAGTTGATATG",14,24.82,9.8,-1.04,0.19,2.12,1.05,0.02,">1 nonsynonymous","D34F T140F",2
"lib2","SARS-CoV-2","TAAAGAATAAGAGACA",8,146.26,6,-4.84,2,2.16,1.24,0.01,">1 nonsynonymous","F44C K56V L95R K128E S147E Y165G G174W",7
"lib2","SARS-CoV-2","TAAAGAATACCATTGG",2,23.67,10.9,0.06,0.08,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGAATGGCCACGT",2,8.04,10.86,0.02,0.11,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGAATTACAATTA",10,124.74,6,-4.84,1.51,1.5,1.14,0.01,">1 nonsynonymous","F17R R27I K128A F167W",4
"lib2","SARS-CoV-2","TAAAGACAAAATGACG",11,181.34,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D68E G116T P177F",3
"lib2","SARS-CoV-2","TAAAGACAAGAAATCC",3,1.66,NA,NA,NA,NA,NA,NA,"stop","A14S S45* N118T",3
"lib2","SARS-CoV-2","TAAAGACACAACCTAT",4,3.41,NA,NA,NA,NA,NA,NA,"stop","V20P S43A F99L Y121* C158L T201C",6
"lib2","SARS-CoV-2","TAAAGACACATTAATA",10,64.94,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","L5K C61T D75T P161L",4
"lib2","SARS-CoV-2","TAAAGACACATTTACT",7,61.27,7.69,-3.14,0.3,1.5,1,0.03,">1 nonsynonymous","S45L R78L R136V",3
"lib2","SARS-CoV-2","TAAAGACAGTACGTTC",4,50.02,10.57,-0.27,0.07,2.89,1.12,0,">1 nonsynonymous","G9R L122A S200V",3
"lib2","SARS-CoV-2","TAAAGACATTGTGGAG",3,108.67,10.69,-0.15,0.04,2.94,1.07,0,">1 nonsynonymous","V37I C61F",2
"lib2","SARS-CoV-2","TAAAGACCATCTTCAT",13,165.11,6,-4.84,2,3,1.18,0,">1 nonsynonymous","Q176K V180W",2
"lib2","SARS-CoV-2","TAAAGACCATTAAGAA",2,15.17,6.39,-4.45,1.39,1.5,1.09,0.02,">1 nonsynonymous","F8S I80M G101N",3
"lib2","SARS-CoV-2","TAAAGACCATTGCACA",6,40.78,8.73,-2.11,0.15,1.75,1.11,0.01,"1 nonsynonymous","S19F",1
"lib2","SARS-CoV-2","TAAAGACCGCTCGAAG",8,63.3,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A14R G83K L95S S129Q",4
"lib2","SARS-CoV-2","TAAAGACGCAGCGAAC",7,88.78,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V11W R25W G152S T170R",4
"lib2","SARS-CoV-2","TAAAGACGCCCTAAGC",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127H N171S",2
"lib2","SARS-CoV-2","TAAAGACGTAACACTA",3,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96L V103H N107C G152Y",4
"lib2","SARS-CoV-2","TAAAGACTATTAGAAC",10,189.65,8.94,-1.9,0.07,1.95,1.11,0,">1 nonsynonymous","L5P V77T D98I F156R",4
"lib2","SARS-CoV-2","TAAAGACTCAAGACCC",14,55.27,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D34Y T55N A105K",3
"lib2","SARS-CoV-2","TAAAGACTCGTACTCC",3,25.87,8.15,-2.68,0.21,2.41,1.09,0.02,">1 nonsynonymous","S113E I138L",2
"lib2","SARS-CoV-2","TAAAGACTTAAAAGGA",2,1.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181P",1
"lib2","SARS-CoV-2","TAAAGAGAAACATTCT",6,25.79,9.34,-1.5,0.13,1.97,1.08,0.01,">1 nonsynonymous","A14T A105M",2
"lib2","SARS-CoV-2","TAAAGAGAACTTGCAA",11,43.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Q79R Y93L T100W Q163S S184N S200A",6
"lib2","SARS-CoV-2","TAAAGAGAAGATACCT",4,231.81,10.79,-0.04,0.04,2.92,1.08,0,"1 nonsynonymous","D97N",1
"lib2","SARS-CoV-2","TAAAGAGACCTTCTTA",6,59.43,10.26,-0.57,0.09,2.72,1,0,">1 nonsynonymous","R136Y T201V",2
"lib2","SARS-CoV-2","TAAAGAGACTTTTACT",5,46.8,9.56,-1.27,0.09,1.96,1,0,">1 nonsynonymous","V52I S69K",2
"lib2","SARS-CoV-2","TAAAGAGAGCATCATG",1,7.69,6.1,-4.74,2,3,1.03,0,">1 nonsynonymous","T63F G86V Y121D F156T",4
"lib2","SARS-CoV-2","TAAAGAGAGCCGCATA",1,25.36,9.78,-1.05,0.09,2.76,1.02,0,">1 nonsynonymous","P7T V37L Y143L",3
"lib2","SARS-CoV-2","TAAAGAGAGTCTCCCA",5,66.6,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D112E Q176W",2
"lib2","SARS-CoV-2","TAAAGAGATAAAGAAT",12,33.96,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","S19L S45I F99P R136L L188K",5
"lib2","SARS-CoV-2","TAAAGAGCAACATGGC",2,0.32,NA,NA,NA,NA,NA,NA,"stop","F44R D68* A81P Y91L",4
"lib2","SARS-CoV-2","TAAAGAGCCTATATCA",9,103.99,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5C N40A N64I G86S",4
"lib2","SARS-CoV-2","TAAAGAGCGCTCAACA",9,183.03,10.83,-0.01,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGAGGGCAGCTTT",4,74.28,10.84,0,0.06,2.92,1.11,0,">1 nonsynonymous","N24K N130Y",2
"lib2","SARS-CoV-2","TAAAGAGGTCTATCCG",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31Y P54K Q84H",3
"lib2","SARS-CoV-2","TAAAGAGGTTTTTTAC",2,0.88,NA,NA,NA,NA,NA,NA,"stop","Y50S K56* K94R T201A",4
"lib2","SARS-CoV-2","TAAAGAGTATTCCGAA",7,234.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36V F160V Q176K",3
"lib2","SARS-CoV-2","TAAAGAGTCAAGAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","K56* T140*",2
"lib2","SARS-CoV-2","TAAAGAGTCCCGGAAC",2,13.44,10.05,-0.79,0.11,2.85,1.06,0.01,">1 nonsynonymous","T3N L122R N151T G155Y",4
"lib2","SARS-CoV-2","TAAAGAGTTATACCTG",4,127.26,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A14N S43L A81E P161L",4
"lib2","SARS-CoV-2","TAAAGATAACATGAAA",2,0.12,NA,NA,NA,NA,NA,NA,"stop","A22L L57A Y165*",3
"lib2","SARS-CoV-2","TAAAGATAACCCAGAA",3,0.3,NA,NA,NA,NA,NA,NA,"stop","Y93* G174L",2
"lib2","SARS-CoV-2","TAAAGATACCAACTAA",2,21.82,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","R179M",1
"lib2","SARS-CoV-2","TAAAGATAGACAGTGT",7,5.65,NA,NA,NA,NA,NA,NA,"stop","A42R G51N G86L P96R A105M V115F E141* T148A F160N V173D",10
"lib2","SARS-CoV-2","TAAAGATAGTTTCACA",6,146.92,9.63,-1.2,0.04,2,1.07,0,">1 nonsynonymous","F12I G83V",2
"lib2","SARS-CoV-2","TAAAGATCAGTTATAA",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F C49S I142Y",3
"lib2","SARS-CoV-2","TAAAGATCGAGCAGTC",4,10.02,9.76,-1.08,0.19,1.85,1.28,0.02,">1 nonsynonymous","S41N T100P T201M",3
"lib2","SARS-CoV-2","TAAAGATCTAAATAAT",3,12.48,6,-4.84,2,3,1.4,0.02,">1 nonsynonymous","T63K C102R",2
"lib2","SARS-CoV-2","TAAAGATCTAACAGAA",1,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44M S45Y W106K",3
"lib2","SARS-CoV-2","TAAAGATGAAAAAGGA",2,26.47,9.9,-0.94,0.07,2.97,1.03,0,">1 nonsynonymous","R27T R73S",2
"lib2","SARS-CoV-2","TAAAGATGGATATCAT",1,8.19,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","N92Y Y119F E141M",3
"lib2","SARS-CoV-2","TAAAGATGTACTAAAT",4,91.64,10.84,0,0.08,2.83,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGATTCAAATACT",1,20.66,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S36L Y50H D98Y G146P",4
"lib2","SARS-CoV-2","TAAAGATTCACACTCA",7,34.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P82V V182W",2
"lib2","SARS-CoV-2","TAAAGATTCGACCTAA",5,118.04,6.26,-4.57,0.68,1.5,1.14,0.02,">1 nonsynonymous","D112S V153C",2
"lib2","SARS-CoV-2","TAAAGATTTCACGATG",1,9.9,9.26,-1.58,0.1,2.9,1.06,0,">1 nonsynonymous","F167Y G174M",2
"lib2","SARS-CoV-2","TAAAGATTTGCCCAGA",4,34.12,8.8,-2.04,0.11,2.22,1.03,0,">1 nonsynonymous","F62L D90C I138V S147C K198W",5
"lib2","SARS-CoV-2","TAAAGCAAACATCAAT",14,114.67,6,-4.84,1.32,1.5,1.26,0.02,">1 nonsynonymous","L5S V11I V71S P149C",4
"lib2","SARS-CoV-2","TAAAGCAAACGGCATG",1,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82H G152N",2
"lib2","SARS-CoV-2","TAAAGCAACTCTCACT",15,7.19,NA,NA,NA,NA,NA,NA,"stop","F44E T55K Y123* E186G",4
"lib2","SARS-CoV-2","TAAAGCAAGCCCTATG",14,126.02,6.09,-4.75,0.85,1.5,1.24,0.02,">1 nonsynonymous","A81C F99L V153Y",3
"lib2","SARS-CoV-2","TAAAGCAAGGCGGTCC",2,35.27,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","V52I D68V D90S N151I P197Q T201L",6
"lib2","SARS-CoV-2","TAAAGCAAGGCGTATC",2,38.89,10.31,-0.52,0.07,2.7,1.05,0,">1 nonsynonymous","Y91K N120K",2
"lib2","SARS-CoV-2","TAAAGCACCAATTGGT",10,68.71,10.32,-0.51,0.04,2.86,1.09,0,">1 nonsynonymous","I2A D59V D90N",3
"lib2","SARS-CoV-2","TAAAGCACCGTACAAC",8,0.47,NA,NA,NA,NA,NA,NA,"stop","R27V L38R C61W D68* Y165I P169R",6
"lib2","SARS-CoV-2","TAAAGCAGAGATAAAC",4,75.38,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","E10H N30R I88K P149R T170R",5
"lib2","SARS-CoV-2","TAAAGCAGATTTAGAG",3,148.68,8.42,-2.42,0.1,2.49,1.1,0,">1 nonsynonymous","A14R R78Q A81K Y119P",4
"lib2","SARS-CoV-2","TAAAGCAGCCGAATAC",12,56.37,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S43V C102S",2
"lib2","SARS-CoV-2","TAAAGCAGGCAATTAC",2,6.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91E",1
"lib2","SARS-CoV-2","TAAAGCAGGGCATCTT",9,10.37,6.55,-4.29,0.27,3,1.17,0,">1 nonsynonymous","N13V L57Y W106D",3
"lib2","SARS-CoV-2","TAAAGCATATGTAAAA",5,85.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137G T170M",2
"lib2","SARS-CoV-2","TAAAGCATCTTTATAA",4,44.04,10.85,0.01,0.06,2.84,1.1,0,">1 nonsynonymous","N64L E154R",2
"lib2","SARS-CoV-2","TAAAGCATGTATAAAA",3,58.02,10.7,-0.13,0.04,2.87,1.13,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","TAAAGCATTACTAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* T55V V103S V115N",4
"lib2","SARS-CoV-2","TAAAGCCAACTGGTTA",10,55.71,6.12,-4.72,1.12,1.5,1.24,0.04,">1 nonsynonymous","P82L W106T S184F",3
"lib2","SARS-CoV-2","TAAAGCCAAGGTTCAT",3,21.3,10.29,-0.55,0.05,2.99,1,0,">1 nonsynonymous","P133H A192Y",2
"lib2","SARS-CoV-2","TAAAGCCATATACGTG",2,44.26,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F44A P54A C61S A81V R136L F160S",6
"lib2","SARS-CoV-2","TAAAGCCCCTACATTA",7,9.13,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","T3Y K87T Y93N Y123P N151A",5
"lib2","SARS-CoV-2","TAAAGCCTGGACGTAC",3,25.82,10.76,-0.07,0.1,2.87,1.09,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","TAAAGCCTTAACTATC",2,48.57,10.78,-0.06,0.03,2.95,1.05,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","TAAAGCCTTTTCGTTA",1,20.51,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N1T Y35S V77A Q84V K94V",5
"lib2","SARS-CoV-2","TAAAGCGACAAAACCT",2,92.3,10.74,-0.09,0.06,2.85,1.12,0,">1 nonsynonymous","L38I L122Y",2
"lib2","SARS-CoV-2","TAAAGCGACCAGAATC",1,16.35,11.03,0.2,0.05,3,1,0,"1 nonsynonymous","N1D",1
"lib2","SARS-CoV-2","TAAAGCGTCCCATCAG",5,16.61,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","Y66N T85S D90Y L122F D137R G174H",6
"lib2","SARS-CoV-2","TAAAGCGTGTACGTCT",1,70.88,10.21,-0.62,0.04,3,1.02,0,">1 nonsynonymous","R78T Y91L F156H Y178H",4
"lib2","SARS-CoV-2","TAAAGCTAACGGCATG",1,0.13,NA,NA,NA,NA,NA,NA,"stop","T15L G51* Q84Y",3
"lib2","SARS-CoV-2","TAAAGCTAACTCTAAT",5,109.77,10.86,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGCTACGACCACT",2,66.92,9.74,-1.1,0.07,2.88,1.04,0,">1 nonsynonymous","E10T K56M A145E",3
"lib2","SARS-CoV-2","TAAAGCTATATAATCA",1,12.29,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S45D Y50K N92M D112V Q144S G174R",6
"lib2","SARS-CoV-2","TAAAGCTATATGAGTT",3,163.29,9.66,-1.18,0.04,2.28,1.04,0,">1 nonsynonymous","Y178E S200Y",2
"lib2","SARS-CoV-2","TAAAGCTATCCACCTA",3,73.76,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","Y143P",1
"lib2","SARS-CoV-2","TAAAGCTCGATACACG",6,133.37,10.83,-0.01,0.05,2.91,1.11,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TAAAGCTGGATGTAAC",2,42.65,10.03,-0.81,0.07,2.98,1.02,0.01,">1 nonsynonymous","N120I G155N",2
"lib2","SARS-CoV-2","TAAAGCTGGTTCTGGG",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90C N107D V115D",3
"lib2","SARS-CoV-2","TAAAGCTTTATTGTAG",12,93.75,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","R27T Y50H Y93A A105R Y119V",5
"lib2","SARS-CoV-2","TAAAGCTTTATTGTCT",2,27.5,6.04,-4.8,1.32,1.5,1.16,0.04,">1 nonsynonymous","F12L A33V C61S E141R T170I",5
"lib2","SARS-CoV-2","TAAAGGAAAAATTCCG",6,240.94,10.81,-0.03,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGAAAACATACT",1,29.64,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R27E F62V G83N L95Y",4
"lib2","SARS-CoV-2","TAAAGGAAAACTGGGC",9,127.83,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F12I I28T A42N Y121D E135K F156T R179N",7
"lib2","SARS-CoV-2","TAAAGGAAACAAGTGG",2,17.29,10.92,0.08,0.1,2.88,1.13,0,"1 nonsynonymous","T201E",1
"lib2","SARS-CoV-2","TAAAGGAACATCTGGT",9,1.78,NA,NA,NA,NA,NA,NA,"stop","F8K F44* N64T D68G",4
"lib2","SARS-CoV-2","TAAAGGAATATACACT",2,22.13,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","E10L R25Q S53P L60P",4
"lib2","SARS-CoV-2","TAAAGGAATCCCCGTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","TAAAGGACGACTCCCT",4,100.2,9.29,-1.55,0.03,2.92,1.09,0,">1 nonsynonymous","N64E G83C Y159F",3
"lib2","SARS-CoV-2","TAAAGGACGCACCCCA",11,134.43,10.84,0,0.05,2.94,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAAGGACGTTTTTTC",4,124.63,10.83,0,0.06,2.92,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGACTAACAAAT",3,47.57,8.91,-1.93,0.15,1.5,1.14,0.01,">1 nonsynonymous","L131T G155R",2
"lib2","SARS-CoV-2","TAAAGGACTATCGTCC",8,171.09,10.33,-0.51,0.03,2.86,1.05,0,">1 nonsynonymous","S41Y L60T G83S",3
"lib2","SARS-CoV-2","TAAAGGACTCCCCCGC",1,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77D E135W G146P C158S",4
"lib2","SARS-CoV-2","TAAAGGAGATTGCTGA",11,155.9,10.88,0.04,0.04,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGAGTACAATAG",7,299.64,8.28,-2.56,0.12,2.2,1.06,0.01,"1 nonsynonymous","Q176I",1
"lib2","SARS-CoV-2","TAAAGGAGTGGCCACC",3,23.9,6,-4.84,2,3,1.18,0.02,">1 nonsynonymous","C31E Y121S G152C",3
"lib2","SARS-CoV-2","TAAAGGAGTTGTGTAG",8,17.67,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34T Y121S R127S",3
"lib2","SARS-CoV-2","TAAAGGATAGGTCAAA",2,0.33,NA,NA,NA,NA,NA,NA,"stop","A81T A89*",2
"lib2","SARS-CoV-2","TAAAGGATCTTGATTC",2,70.02,10.56,-0.28,0.04,2.94,1.07,0,">1 nonsynonymous","A18S A33V N110V N151D",4
"lib2","SARS-CoV-2","TAAAGGATTTAGAAAA",1,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10H F44L F167D",3
"lib2","SARS-CoV-2","TAAAGGCACATAGGGA",12,189.49,10.85,0.01,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGCACCATAAGT",3,50.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5N N40P D98N V103N G116H T201A",6
"lib2","SARS-CoV-2","TAAAGGCAGTCTCAAC",7,36,10.89,0.06,0.06,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGCAGTTGAGGA",4,48.23,10.2,-0.63,0.05,2.71,1.02,0,">1 nonsynonymous","N24I I138S",2
"lib2","SARS-CoV-2","TAAAGGCCAACGCTCA",9,98.03,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4L D59L F99V N120L L187S",5
"lib2","SARS-CoV-2","TAAAGGCCACCCATTA",13,4.69,NA,NA,NA,NA,NA,NA,"stop","N64L P82*",2
"lib2","SARS-CoV-2","TAAAGGCTGTTAAACC",1,43.15,10.26,-0.58,0.04,2.91,1.02,0,">1 nonsynonymous","A42T C61N E141W",3
"lib2","SARS-CoV-2","TAAAGGCTTTCTATAT",3,36.3,10.73,-0.11,0.04,2.94,1.06,0,"1 nonsynonymous","L60G",1
"lib2","SARS-CoV-2","TAAAGGGACATCGTTT",15,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I S45I S53V V65F Y66T F99L F167L T201K",8
"lib2","SARS-CoV-2","TAAAGGGGCCCGGACC",5,92.14,10.49,-0.34,0.03,2.99,1.02,0,">1 nonsynonymous","C61L K87S S164H",3
"lib2","SARS-CoV-2","TAAAGGGGCGCGGTAG",10,46.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T55D G101D N107F S129A N157D",5
"lib2","SARS-CoV-2","TAAAGGGGGTACTAAA",3,62.08,9.86,-0.98,0.08,2.65,1.05,0,">1 nonsynonymous","A14E A42S C61L R78Y N151K",5
"lib2","SARS-CoV-2","TAAAGGGTGAACCGAA",6,91.79,9.89,-0.95,0.04,2.97,1.04,0,">1 nonsynonymous","A145G F156S Q168F",3
"lib2","SARS-CoV-2","TAAAGGGTTGGTATAC",9,68.19,6,-4.84,2,1.5,1.19,0.03,"1 nonsynonymous","G101W",1
"lib2","SARS-CoV-2","TAAAGGGTTTAAAACA",5,129.03,10.06,-0.78,0.04,2.66,1.05,0,">1 nonsynonymous","S139V C195S",2
"lib2","SARS-CoV-2","TAAAGGTAAACTCTTT",4,76.4,9.18,-1.65,0.08,1.99,1.13,0,">1 nonsynonymous","N30M G146W",2
"lib2","SARS-CoV-2","TAAAGGTAACTACAAG",2,19.56,6.82,-4.02,0.63,1.71,1.16,0.05,">1 nonsynonymous","K26T S43N G172S",3
"lib2","SARS-CoV-2","TAAAGGTATTTACGAA",1,46.6,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y35V D137R Q144I T170G",4
"lib2","SARS-CoV-2","TAAAGGTCTGGATCAA",5,23.38,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D59V K87L T100K L183A",4
"lib2","SARS-CoV-2","TAAAGGTGAAATAAGA",9,36.36,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D90V L122P",2
"lib2","SARS-CoV-2","TAAAGGTGCACAGATT",3,36.58,10.84,0,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGGTTTTAGTACC",12,17.73,10.3,-0.54,0.06,2.85,1.03,0,">1 nonsynonymous","C61L I138Y",2
"lib2","SARS-CoV-2","TAAAGTAAAACCAGGT",6,2.82,NA,NA,NA,NA,NA,NA,"stop","G86V Y91* E141A",3
"lib2","SARS-CoV-2","TAAAGTAAAACCTATA",6,37.78,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V71D N157G Q163Y",3
"lib2","SARS-CoV-2","TAAAGTAAAAGGAAAA",4,30.95,6.02,-4.82,0.97,1.5,1.12,0.02,">1 nonsynonymous","D97T C102F Y175L",3
"lib2","SARS-CoV-2","TAAAGTAAACAAACAG",16,173.76,8.92,-1.92,0.12,1.59,1.09,0.01,">1 nonsynonymous","S69E S129F",2
"lib2","SARS-CoV-2","TAAAGTAAAGGGCATA",2,0.68,NA,NA,NA,NA,NA,NA,"stop","C61S Y91*",2
"lib2","SARS-CoV-2","TAAAGTAAGTAAGCAT",16,5.29,NA,NA,NA,NA,NA,NA,"stop","S19R F47V L60* E141Q",4
"lib2","SARS-CoV-2","TAAAGTAAGTAGAGAA",5,31.17,9.65,-1.19,0.1,2.12,1.06,0,">1 nonsynonymous","A33Y A89N W106R",3
"lib2","SARS-CoV-2","TAAAGTAAGTAGTTCC",7,14.32,7.13,-3.71,0.2,1.5,1,0.01,">1 nonsynonymous","I28R S45L",2
"lib2","SARS-CoV-2","TAAAGTACAAACGTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37I K56R D98Y S184A",4
"lib2","SARS-CoV-2","TAAAGTACATCGATTT",1,33.73,10.27,-0.56,0.13,2.77,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAAGTAGACGAGGCG",3,1.3,NA,NA,NA,NA,NA,NA,"stop","D98* D137G C150D T170M",4
"lib2","SARS-CoV-2","TAAAGTAGTGATTCCC",8,87.33,9.25,-1.59,0.08,2.63,1.2,0,">1 nonsynonymous","D34N K114P",2
"lib2","SARS-CoV-2","TAAAGTAGTTACCCAA",5,1.08,NA,NA,NA,NA,NA,NA,"stop","T15V Y50L I80* D90T D98V K132V",6
"lib2","SARS-CoV-2","TAAAGTAGTTGCTGGT",1,26.19,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K48N F70D",2
"lib2","SARS-CoV-2","TAAAGTATAGTAGTGC",11,70.65,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S19G G51I A145G S164G",4
"lib2","SARS-CoV-2","TAAAGTATATACCCTT",5,32.21,7.33,-3.5,0.18,1.62,1.12,0.01,">1 nonsynonymous","S41L D59V Y143Q",3
"lib2","SARS-CoV-2","TAAAGTATGGCAAGTT",12,153.41,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35S P96R D137P",3
"lib2","SARS-CoV-2","TAAAGTATGTGAAAAC",10,37,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N64S I80P W106M K128W N151T",5
"lib2","SARS-CoV-2","TAAAGTCAAGATTGCT",4,32.83,7.58,-3.25,0.26,1.5,1.11,0.02,">1 nonsynonymous","V65P S164E",2
"lib2","SARS-CoV-2","TAAAGTCAGAAATAAA",4,28.83,10.51,-0.33,0.06,2.98,1.02,0,">1 nonsynonymous","R16K S53F L60A",3
"lib2","SARS-CoV-2","TAAAGTCAGCCGGCCA",20,375.36,9.84,-0.99,0.06,2.5,1.03,0,">1 nonsynonymous","L38C V173I T201I",3
"lib2","SARS-CoV-2","TAAAGTCGAAAAAAGA",18,149.61,6,-4.84,2,3,1.15,0,">1 nonsynonymous","D59L V77L P133F F167A",4
"lib2","SARS-CoV-2","TAAAGTCGAAAAAGTG",5,104.68,10.87,0.04,0.04,2.95,1.06,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","TAAAGTCGAATACTAC",8,0.07,NA,NA,NA,NA,NA,NA,"stop","W106* Y159I Q168L",3
"lib2","SARS-CoV-2","TAAAGTCTACAGTATC",17,289.86,10.14,-0.69,0.03,2.85,1.04,0,">1 nonsynonymous","V37Q D98V Y178W",3
"lib2","SARS-CoV-2","TAAAGTCTGCCTCAGC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","P133S P149W Y159* G172W",4
"lib2","SARS-CoV-2","TAAAGTCTGTCAGAAA",1,27.37,10.63,-0.2,0.06,2.92,1.06,0,">1 nonsynonymous","L5Y C61M F185M",3
"lib2","SARS-CoV-2","TAAAGTGATTAACATC",8,115.55,9.25,-1.58,0.04,2.92,1.11,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","TAAAGTGCAGCCGAAC",3,73.74,10.63,-0.2,0.04,2.89,1.13,0,">1 nonsynonymous","V37R G83N N130L",3
"lib2","SARS-CoV-2","TAAAGTGCATATGATG",3,52.58,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6G G86V Y93C N118R S184V",5
"lib2","SARS-CoV-2","TAAAGTGCTACCGACC",6,35.87,6.04,-4.8,1.44,1.5,1.31,0.03,">1 nonsynonymous","I88M K128V L183F",3
"lib2","SARS-CoV-2","TAAAGTGGCATAACGT",3,17.74,6.95,-3.88,0.63,1.5,1.23,0.08,">1 nonsynonymous","L38Q T55L L95M G152C",4
"lib2","SARS-CoV-2","TAAAGTGGCCTTAACG",2,78.46,10.73,-0.11,0.02,2.93,1.06,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","TAAAGTGTGATCGATG",3,22.43,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14L Y121V F160W Q176L S184E",5
"lib2","SARS-CoV-2","TAAAGTTACATTAGGG",1,0.65,NA,NA,NA,NA,NA,NA,"stop","G51Y Y121V C158*",3
"lib2","SARS-CoV-2","TAAAGTTACCCCGAAT",3,15.11,9.72,-1.11,0.2,1.79,1.15,0.02,">1 nonsynonymous","W106Y S184L",2
"lib2","SARS-CoV-2","TAAAGTTCCCCAGGAG",3,24.35,7.65,-3.18,0.41,1.5,1.12,0.06,">1 nonsynonymous","E10S Y50D A105M",3
"lib2","SARS-CoV-2","TAAAGTTGATTATAAG",3,11.58,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V32G C49M V77S K87Y A145W",5
"lib2","SARS-CoV-2","TAAAGTTGCAGAGCAA",6,7.1,NA,NA,NA,NA,NA,NA,"stop","C6D Y91* Q163T G174Y",4
"lib2","SARS-CoV-2","TAAAGTTTCCCAGGTG",7,29.18,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","T3C K56I I80T S139V",4
"lib2","SARS-CoV-2","TAAAGTTTTGGCTCCC",5,196.97,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","E10L D97G L122T N151H Y159T",5
"lib2","SARS-CoV-2","TAAATAAAAAACCAAC",2,7.39,6,-4.84,2,3,1.05,0,">1 nonsynonymous","N30S F44V C102S K132R S139G T201E",6
"lib2","SARS-CoV-2","TAAATAAAAAGAACTG",3,30.88,10.49,-0.35,0.08,2.86,1.08,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","TAAATAAAAAGTACGG",3,132.99,10.66,-0.17,0.03,2.95,1.04,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","TAAATAAAACACGTAA",5,2.56,NA,NA,NA,NA,NA,NA,"stop","A42L G51N Q84*",3
"lib2","SARS-CoV-2","TAAATAAAACCGAGAT",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77K V103L N118Y",3
"lib2","SARS-CoV-2","TAAATAAAACTTGTGT",15,70.92,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C6K L57V G83M I88Y I138H",5
"lib2","SARS-CoV-2","TAAATAAACAGAGTAA",7,98.72,10.21,-0.63,0.04,2.92,1.03,0,">1 nonsynonymous","I2V W23Y F156W",3
"lib2","SARS-CoV-2","TAAATAAACCTGAATA",11,79.55,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N30T R73V D97S Y123I",4
"lib2","SARS-CoV-2","TAAATAAACTATAACG",3,55.15,9.69,-1.15,0.04,2.89,1.12,0,"1 nonsynonymous","P169C",1
"lib2","SARS-CoV-2","TAAATAAAGAACCGAA",2,1.05,NA,NA,NA,NA,NA,NA,"stop","N1P P7C F12S N130* T140E",5
"lib2","SARS-CoV-2","TAAATAAAGCAAAACG",10,77.88,6.86,-3.98,0.35,1.5,1.18,0.02,">1 nonsynonymous","N40Y N64I A89I",3
"lib2","SARS-CoV-2","TAAATAAAGGAGTGAT",4,85.51,9.95,-0.89,0.05,2.87,1.04,0,"1 nonsynonymous","Y121A",1
"lib2","SARS-CoV-2","TAAATAAATAAGAACA",7,3.34,NA,NA,NA,NA,NA,NA,"stop","C6I S41A C61K D68* D75I",5
"lib2","SARS-CoV-2","TAAATAAATACATAGA",3,36.8,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","F44S C49S A190L",3
"lib2","SARS-CoV-2","TAAATAAATACTTAAA",5,1.21,NA,NA,NA,NA,NA,NA,"stop","G101R N130K C150*",3
"lib2","SARS-CoV-2","TAAATAAATCAGACGG",7,108.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y39E K132W C158K",3
"lib2","SARS-CoV-2","TAAATAAATCCCTAAC",3,67.27,9.97,-0.86,0.08,2.31,1.01,0,">1 nonsynonymous","C61L W106L L122S K128R",4
"lib2","SARS-CoV-2","TAAATAAATGTAGGAA",4,45.29,10.87,0.03,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATAAATTTCAAAG",7,3.74,NA,NA,NA,NA,NA,NA,"stop","Y39* T46* V153G",3
"lib2","SARS-CoV-2","TAAATAACATATGCTG",9,61.49,9.11,-1.72,0.09,1.89,1.03,0,">1 nonsynonymous","Q84L T148D G152I",3
"lib2","SARS-CoV-2","TAAATAACGACAAATG",9,70.14,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A18S C61N A81P D97N",4
"lib2","SARS-CoV-2","TAAATAACGGGAATAC",2,30.38,10.83,0,0.14,2.69,1.13,0.01,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","TAAATAACGTAAATGC",2,9.7,7.13,-3.7,0.39,1.5,1.05,0.08,">1 nonsynonymous","A14T L183G",2
"lib2","SARS-CoV-2","TAAATAACTACACCCA",10,154.98,10.83,0,0.05,2.84,1.13,0,">1 nonsynonymous","S43K F134S E154R",3
"lib2","SARS-CoV-2","TAAATAACTAGAAGAC",6,59.55,6,-4.84,2,1.5,1.3,0.02,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TAAATAACTGAAATCA",6,51.53,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K87Y L95A G166Y",3
"lib2","SARS-CoV-2","TAAATAACTGTCCGGT",5,1.5,NA,NA,NA,NA,NA,NA,"stop","D90L W106C R136*",3
"lib2","SARS-CoV-2","TAAATAAGAATATGAT",1,12.68,10.77,-0.07,0.1,2.7,1.3,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TAAATAAGACAAATGT",10,31.4,6,-4.84,2,3,1.16,0,">1 nonsynonymous","R27Q V52P G86A L95W G146V Y178C",6
"lib2","SARS-CoV-2","TAAATAAGATTTCATA",9,56.4,6,-4.84,2,1.69,1.13,0,">1 nonsynonymous","S36E C61T F70L D90W R127K",5
"lib2","SARS-CoV-2","TAAATAAGCAAAAGTC",4,16.79,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","F70R E141R",2
"lib2","SARS-CoV-2","TAAATAAGCGCACTAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68N",1
"lib2","SARS-CoV-2","TAAATAAGCGGTTGTT",3,6.47,8.95,-1.89,0.77,2.19,1.09,0.06,">1 nonsynonymous","N13R A89V G155S",3
"lib2","SARS-CoV-2","TAAATAAGGTCGAAAT",1,1.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A33S",1
"lib2","SARS-CoV-2","TAAATAAGGTGAGGCA",6,123.64,10.76,-0.07,0.03,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATAAGTAGTCTTG",1,29.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68L A81D T85A Y165I",4
"lib2","SARS-CoV-2","TAAATAAGTGTTGAAG",8,36.2,10.95,0.12,0.08,2.94,1.08,0,">1 nonsynonymous","K56R L122A",2
"lib2","SARS-CoV-2","TAAATAATAAGGAGTT",2,12.97,9.06,-1.77,0.11,2.87,1.05,0.01,">1 nonsynonymous","G9R I142M G166W",3
"lib2","SARS-CoV-2","TAAATAATATCGTAAA",4,92.87,10.62,-0.22,0.05,2.96,1.03,0,">1 nonsynonymous","T3Y G152S L188M",3
"lib2","SARS-CoV-2","TAAATAATCAATCGTA",10,122.73,6.22,-4.62,0.84,1.5,1.26,0.03,">1 nonsynonymous","G86S K114G F126R",3
"lib2","SARS-CoV-2","TAAATAATCCCATAGG",5,83.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V71N K132Q T148I",3
"lib2","SARS-CoV-2","TAAATAATCTAGTATA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100V A105R",2
"lib2","SARS-CoV-2","TAAATAATCTCAGAAT",1,31.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I80L Q84M G146K T170L",4
"lib2","SARS-CoV-2","TAAATAATCTTATAGC",9,79.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S R16I W23M Y178H",4
"lib2","SARS-CoV-2","TAAATAATGAAAGGGT",2,15.74,6,-4.84,1.28,3,1.13,0,">1 nonsynonymous","V37F N92I V103L Y143A T170N",5
"lib2","SARS-CoV-2","TAAATACAAGGTCAAT",3,43.78,9.35,-1.49,0.05,2.59,1.07,0,">1 nonsynonymous","N107E P149S",2
"lib2","SARS-CoV-2","TAAATACAATCATATT",3,28.3,10.79,-0.05,0.06,2.98,1.07,0,"1 nonsynonymous","V153S",1
"lib2","SARS-CoV-2","TAAATACACCAAATAA",6,79.56,10.64,-0.19,0.06,2.86,1.08,0,">1 nonsynonymous","V37R Y66F",2
"lib2","SARS-CoV-2","TAAATACATAAACTTA",1,0.49,NA,NA,NA,NA,NA,NA,"stop","S45D P54*",2
"lib2","SARS-CoV-2","TAAATACATGAGTCCT",4,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y A105P L131I",3
"lib2","SARS-CoV-2","TAAATACATGCCCGCA",2,7.68,10.78,-0.06,0.12,2.78,1.2,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TAAATACCAAAGATCT",11,179.05,10.82,-0.02,0.05,2.89,1.08,0,"1 nonsynonymous","N110D",1
"lib2","SARS-CoV-2","TAAATACCACGTACTA",21,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54E V65W R78L L162C",4
"lib2","SARS-CoV-2","TAAATACCAGATTTAT",8,153.94,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V37L C158P V173N",3
"lib2","SARS-CoV-2","TAAATACCCAGTTCAT",4,115.09,10.77,-0.07,0.05,2.93,1.09,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","TAAATACCCTGGATAG",21,1008.53,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G9A I88V S113D T140M",4
"lib2","SARS-CoV-2","TAAATACCGAGCCGTA",4,60.26,10.37,-0.46,0.06,2.92,1.05,0,">1 nonsynonymous","Y121C S147P",2
"lib2","SARS-CoV-2","TAAATACCGAGGGAAA",3,58.43,8.68,-2.15,0.08,2.91,1.07,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","TAAATACCGAGTCCTA",4,48.28,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9V G83I Q176R",3
"lib2","SARS-CoV-2","TAAATACCGGTTCACA",12,1.09,NA,NA,NA,NA,NA,NA,"stop","S41P K56* G83Y C102K",4
"lib2","SARS-CoV-2","TAAATACGAGGTGGTA",9,127.55,10.48,-0.35,0.04,2.91,1.04,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","TAAATACGGAAATGGT",7,39.73,6.34,-4.5,0.45,1.5,1.24,0.01,">1 nonsynonymous","G9C N24L S36K Y123S S139A",5
"lib2","SARS-CoV-2","TAAATACGTATGACGA",11,108.78,7.01,-3.83,0.15,1.5,1.12,0,">1 nonsynonymous","T55L A105S L122F N157P",4
"lib2","SARS-CoV-2","TAAATACGTATGGGGA",5,95.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43A N107I P133N",3
"lib2","SARS-CoV-2","TAAATACGTCAAAAAT",2,12.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F47L E76K",2
"lib2","SARS-CoV-2","TAAATACTAAAGTCTT",1,11.64,10.89,0.06,0.12,3,1.03,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","TAAATACTACTGGGAA",11,48.47,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F8L C102S",2
"lib2","SARS-CoV-2","TAAATACTCAAACTAA",3,27.41,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","V11P S29W N130R G166T K199T",5
"lib2","SARS-CoV-2","TAAATACTCTCTCCAT",1,13.96,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A89T K94Y G152L",3
"lib2","SARS-CoV-2","TAAATACTGAACCTAT",1,16.37,10.74,-0.09,0.09,3,1,0,">1 nonsynonymous","N4S K56L",2
"lib2","SARS-CoV-2","TAAATACTGTAACTGT",5,88.81,10.2,-0.63,0.04,2.75,1.07,0,"1 nonsynonymous","E10W",1
"lib2","SARS-CoV-2","TAAATACTTCTTGAAA",2,40.32,10.73,-0.1,0.05,2.98,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAATACTTGTCCCAT",4,25.86,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A14G V77E Y91F L162A",4
"lib2","SARS-CoV-2","TAAATACTTTAATTAG",1,36.2,8.8,-2.03,0.11,2.16,1.11,0.01,">1 nonsynonymous","N107Q A145T",2
"lib2","SARS-CoV-2","TAAATAGAAACGAAAT",3,8.47,6,-4.84,0.87,3,1.08,0,">1 nonsynonymous","V20C A33S D98G G146M C158Y",5
"lib2","SARS-CoV-2","TAAATAGAAACTGGCT",9,167.26,10.33,-0.5,0.03,2.93,1.08,0,"1 nonsynonymous","G174Q",1
"lib2","SARS-CoV-2","TAAATAGACATTTAAC",7,51.45,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D68M D137V G146S C150G G166L",5
"lib2","SARS-CoV-2","TAAATAGAGGAAAAAA",9,72.08,9.63,-1.21,0.13,2.06,1.06,0.01,">1 nonsynonymous","F17T P149Y P197M",3
"lib2","SARS-CoV-2","TAAATAGATAATGATA",5,45.54,10.26,-0.58,0.07,2.73,1.11,0,">1 nonsynonymous","T3V F62G S164A",3
"lib2","SARS-CoV-2","TAAATAGCAGTACACA",5,93.07,9.46,-1.38,0.1,2.3,1.05,0,">1 nonsynonymous","N30S L60A G152P",3
"lib2","SARS-CoV-2","TAAATAGCCACTATGT",14,91.06,9.54,-1.3,0.09,1.97,1.09,0,">1 nonsynonymous","Y35L A42S Y66S A67G",4
"lib2","SARS-CoV-2","TAAATAGCCTGTCATT",12,193.78,9.88,-0.95,0.05,2.39,1.08,0,">1 nonsynonymous","T85D R136M",2
"lib2","SARS-CoV-2","TAAATAGCGTACTTAC",2,1.65,NA,NA,NA,NA,NA,NA,"stop","F47I K132P Q176*",3
"lib2","SARS-CoV-2","TAAATAGCTGAATGAA",3,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P W106Q D112M P149S",4
"lib2","SARS-CoV-2","TAAATAGTAAGATTAT",3,174.72,8.56,-2.28,0.1,2.4,1.04,0,">1 nonsynonymous","C61A Q176C",2
"lib2","SARS-CoV-2","TAAATAGTCTCAATGA",3,14.29,6.04,-4.79,2,1.5,1.13,0.03,">1 nonsynonymous","F44M P96W",2
"lib2","SARS-CoV-2","TAAATAGTGAGAAACA",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V L95T K114S",3
"lib2","SARS-CoV-2","TAAATAGTGCACATCT",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y T100F Y123V T201G",4
"lib2","SARS-CoV-2","TAAATAGTGTCAAGTA",9,80,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V71M T100M A105I R179K",4
"lib2","SARS-CoV-2","TAAATATAAAACACAG",4,31.32,8.5,-2.33,0.16,2.87,1.06,0.01,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","TAAATATAAACGCATT",4,35.7,10.1,-0.73,0.09,2.66,1.05,0.01,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","TAAATATAATCATTGA",5,24.1,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","L60R G117C R127S C150D",4
"lib2","SARS-CoV-2","TAAATATAATGGTTAA",2,26.63,10.06,-0.78,0.08,2.39,1.08,0,">1 nonsynonymous","I104V Y178L",2
"lib2","SARS-CoV-2","TAAATATAGTCGACGT",2,10.49,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","W23E F44T G174W",3
"lib2","SARS-CoV-2","TAAATATATAATCCTG",1,36.31,10.64,-0.19,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATATATCCCTGTA",3,23.29,6.23,-4.6,0.84,1.5,1.19,0.04,">1 nonsynonymous","R25V T170S T201L",3
"lib2","SARS-CoV-2","TAAATATATTTCGTTG",2,23.05,10.35,-0.48,0.09,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATATCCAGGATTT",4,62.14,8.07,-2.76,0.15,1.52,1.09,0.01,">1 nonsynonymous","Y39S D90I G116F",3
"lib2","SARS-CoV-2","TAAATATCCCAGTGGA",11,81.92,8.36,-2.48,0.18,1.66,1.07,0.01,">1 nonsynonymous","E154K Y165T",2
"lib2","SARS-CoV-2","TAAATATCCTTCGCTC",3,21.21,6.83,-4.01,0.66,1.5,1.12,0.06,">1 nonsynonymous","A14R V77K I138K",3
"lib2","SARS-CoV-2","TAAATATCGAATAATT",4,206.15,9.59,-1.25,0.04,2.62,1.09,0,">1 nonsynonymous","N120L G152V",2
"lib2","SARS-CoV-2","TAAATATCTTGTGGTT",2,7.95,10.38,-0.46,0.09,3,1,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","TAAATATCTTTTAATT",7,91.04,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C6T K48C P149K F185D",4
"lib2","SARS-CoV-2","TAAATATGAAATTGAT",8,28.99,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V103H L162I",2
"lib2","SARS-CoV-2","TAAATATGAACCCTGT",3,34.87,10.34,-0.5,0.04,2.8,1.1,0,">1 nonsynonymous","D59F L95V T148L",3
"lib2","SARS-CoV-2","TAAATATGATACTGAG",1,0.77,NA,NA,NA,NA,NA,NA,"stop","K56M G83N K87G D98I I104* G152P C158K",7
"lib2","SARS-CoV-2","TAAATATGCTAAACAA",4,36.46,8.96,-1.87,0.15,1.58,1.06,0.01,">1 nonsynonymous","F134T V181L",2
"lib2","SARS-CoV-2","TAAATATTACAGCTCC",5,18.43,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","Y93K I104K S184N",3
"lib2","SARS-CoV-2","TAAATATTACTATATG",7,116.53,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N1S G9S R25L S36D N58M N110Q",6
"lib2","SARS-CoV-2","TAAATATTAGCCTCAT",9,5.54,NA,NA,NA,NA,NA,NA,"stop","D34C T55S N64* F167S",4
"lib2","SARS-CoV-2","TAAATATTCAACACAA",10,151.07,8.18,-2.66,0.1,1.67,1.08,0,"1 nonsynonymous","G74V",1
"lib2","SARS-CoV-2","TAAATATTCATTTACC",4,19.06,10.8,-0.04,0.08,2.86,1.13,0,">1 nonsynonymous","N120A K198G",2
"lib2","SARS-CoV-2","TAAATATTCCGTTTGC",5,47.24,10.79,-0.04,0.05,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATATTGCAAGACA",1,2.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","TAAATATTGGACGAAA",3,117.62,10.87,0.03,0.05,2.9,1.11,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","TAAATATTTTTAAGTC",4,5.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79M F99E N107S",3
"lib2","SARS-CoV-2","TAAATCAAAAATGGTG",1,37.57,10.14,-0.69,0.17,2.17,1,0.01,">1 nonsynonymous","P82T V173E",2
"lib2","SARS-CoV-2","TAAATCAAATAGTAGC",3,38.79,10.49,-0.34,0.05,2.92,1.08,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","TAAATCAAGACCTAAC",8,429.14,10.78,-0.05,0.04,2.94,1.07,0,"1 nonsynonymous","L5D",1
"lib2","SARS-CoV-2","TAAATCAAGTAAAATA",7,71.63,9.31,-1.52,0.19,1.5,1,0.02,">1 nonsynonymous","G83A W106V",2
"lib2","SARS-CoV-2","TAAATCAATGATACCT",2,16.2,9.74,-1.1,0.14,2.02,1.11,0.01,">1 nonsynonymous","S29H W106H",2
"lib2","SARS-CoV-2","TAAATCACAAAGTATG",13,24.74,8.4,-2.43,0.46,1.5,1,0.07,">1 nonsynonymous","D34H F62T V103E D137R",4
"lib2","SARS-CoV-2","TAAATCACAACTTCAA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","W106* K114L",2
"lib2","SARS-CoV-2","TAAATCACCAAGAGCA",2,37.75,10.42,-0.41,0.05,2.95,1.06,0,">1 nonsynonymous","C6Y Y35L",2
"lib2","SARS-CoV-2","TAAATCACGATTTGGG",3,22.57,8.33,-2.5,0.22,2.2,1.14,0.02,">1 nonsynonymous","A105W Y119I",2
"lib2","SARS-CoV-2","TAAATCACTAGGACAA",4,1.42,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","TAAATCAGAGACATAA",2,40.41,10.76,-0.08,0.05,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAATCAGTGCGCACC",4,61.2,10.26,-0.57,0.06,2.87,1.04,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","TAAATCAGTGTAAAAT",20,258.64,9.19,-1.64,0.03,2.95,1.08,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","TAAATCATAAGATGAA",3,0.12,NA,NA,NA,NA,NA,NA,"stop","L57Q Y121* L162Q",3
"lib2","SARS-CoV-2","TAAATCATAGTAAATG",3,49.71,9.87,-0.97,0.06,2.52,1.02,0,">1 nonsynonymous","R27T D97T Y178L",3
"lib2","SARS-CoV-2","TAAATCATAGTCTCAC",3,43.42,9.87,-0.97,0.07,2.93,1.1,0,">1 nonsynonymous","L60Q K87E",2
"lib2","SARS-CoV-2","TAAATCATGAAATAAC",1,21,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G51T D75M L122I R136D",4
"lib2","SARS-CoV-2","TAAATCCAACTTACAG",3,0.62,NA,NA,NA,NA,NA,NA,"stop","G9* F62L R78E D90Y",4
"lib2","SARS-CoV-2","TAAATCCAGCCAATAT",18,136.32,7.95,-2.88,0.11,1.66,1.1,0,">1 nonsynonymous","G86Y T148K",2
"lib2","SARS-CoV-2","TAAATCCCAAAGACCC",6,135.86,10.17,-0.66,0.05,2.79,1.04,0,">1 nonsynonymous","Y123W Y159W",2
"lib2","SARS-CoV-2","TAAATCCCATATACCC",1,5.62,6.61,-4.22,2,3,1.24,0.02,">1 nonsynonymous","Y50A L95Q",2
"lib2","SARS-CoV-2","TAAATCCCATTTGAAC",8,56.85,6,-4.84,1.38,1.5,1.14,0.01,">1 nonsynonymous","C61K D68L Q168L V173L Y178F",5
"lib2","SARS-CoV-2","TAAATCCCGCATGACA",4,36.4,10.89,0.05,0.05,2.89,1.12,0,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","TAAATCCCTAGAAAAA",5,82.97,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55D K94W S113K G146L",4
"lib2","SARS-CoV-2","TAAATCCGAGTAACAT",2,124.19,9.22,-1.61,0.1,1.51,1.09,0.01,">1 nonsynonymous","C6V V173S",2
"lib2","SARS-CoV-2","TAAATCCGGACTATAG",5,88.69,9.4,-1.44,0.05,2.38,1.05,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","TAAATCCGGGATTCCA",3,28.17,9.57,-1.26,0.1,1.55,1.03,0.01,">1 nonsynonymous","N1L D75K Y123L T148G",4
"lib2","SARS-CoV-2","TAAATCCTCACTAAGC",2,0,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","TAAATCCTCTACATAC",2,18.04,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","A105I P177W",2
"lib2","SARS-CoV-2","TAAATCCTGGTTGTTG",5,154.7,10.64,-0.19,0.04,2.91,1.05,0,"1 nonsynonymous","A22G",1
"lib2","SARS-CoV-2","TAAATCGAAAGTTAAC",4,49.51,9.45,-1.39,0.07,1.86,1.14,0,">1 nonsynonymous","I2S Y35P Y91I T201H",4
"lib2","SARS-CoV-2","TAAATCGAACTTTTGG",4,15.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G51D A81R Q84H L183H",4
"lib2","SARS-CoV-2","TAAATCGAATTTGACT",7,56.97,9.86,-0.97,0.1,2.66,1.05,0,">1 nonsynonymous","C6W E141T",2
"lib2","SARS-CoV-2","TAAATCGACATAGGAT",1,3.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","TAAATCGACCTAATTG",1,49.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7C A14T D59L P82S Q168V Y175D",6
"lib2","SARS-CoV-2","TAAATCGATACCCATA",1,5.45,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","I2S A81P I88R K132Q",4
"lib2","SARS-CoV-2","TAAATCGATATGCACA",10,113.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48M F70Y P82T G155C",4
"lib2","SARS-CoV-2","TAAATCGGCCTTAAGA",9,2.4,NA,NA,NA,NA,NA,NA,"stop","C61* Y143R",2
"lib2","SARS-CoV-2","TAAATCGGTTGTGTCA",4,6.22,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A22L F160R L183Q",3
"lib2","SARS-CoV-2","TAAATCGTAATAAATC",10,7.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y P82Y",2
"lib2","SARS-CoV-2","TAAATCGTACACAATC",1,96.34,10.69,-0.15,0.07,2.85,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAATCGTATAGCCTA",5,106.2,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N107W N130Y C150N F156S",4
"lib2","SARS-CoV-2","TAAATCGTCGATGCGA",3,8.48,9.03,-1.81,0.18,1.75,1.06,0.01,">1 nonsynonymous","D90S W106V K199D",3
"lib2","SARS-CoV-2","TAAATCGTTAACAAAA",4,1.35,NA,NA,NA,NA,NA,NA,"stop","G83* N110K N120L",3
"lib2","SARS-CoV-2","TAAATCGTTGTGCATG",14,244.89,10.64,-0.19,0.04,2.9,1.06,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","TAAATCTACATCCATA",4,46.51,10.75,-0.09,0.05,2.96,1.02,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","TAAATCTACCCGTCAG",1,12.54,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","L111S P149H G155L A190S",4
"lib2","SARS-CoV-2","TAAATCTACGATTCTT",1,7.63,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","E10R A33S A42D A89V Y123P G155R",6
"lib2","SARS-CoV-2","TAAATCTAGATAACTA",2,35.26,10.84,0,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATCTAGGACACAT",2,25.57,8.9,-1.93,0.1,1.99,1.08,0.01,"1 nonsynonymous","F12H",1
"lib2","SARS-CoV-2","TAAATCTAGGACTTAA",6,2.39,NA,NA,NA,NA,NA,NA,"stop","A14S Y91D V115Q S129P T148F F156*",6
"lib2","SARS-CoV-2","TAAATCTCAACAAAAC",4,85.01,9.17,-1.67,0.05,2.23,1.03,0,">1 nonsynonymous","F8M A18R P54L G83D K87V",5
"lib2","SARS-CoV-2","TAAATCTCCTACCCAC",16,164.56,8.91,-1.93,0.2,1.5,1.03,0.02,">1 nonsynonymous","V11D S36F Y39V F134A V173D",5
"lib2","SARS-CoV-2","TAAATCTGCCCTCACT",9,145.92,10.81,-0.03,0.06,2.87,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATCTTATGAAAAG",20,246.26,9.97,-0.87,0.05,2.36,1.04,0,">1 nonsynonymous","S36L R127S",2
"lib2","SARS-CoV-2","TAAATCTTATGATTGT",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88S D98F",2
"lib2","SARS-CoV-2","TAAATCTTTGATTACC",2,0.16,NA,NA,NA,NA,NA,NA,"stop","L5I E76* W106R K128T",4
"lib2","SARS-CoV-2","TAAATGAACATAAACC",7,54.8,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N107F N151L T170R",3
"lib2","SARS-CoV-2","TAAATGAACTAAGATG",8,34.62,9.1,-1.73,0.22,1.5,1.07,0.02,"1 nonsynonymous","W23L",1
"lib2","SARS-CoV-2","TAAATGAACTACAATG",2,27.27,7.12,-3.71,0.52,1.5,1.26,0.04,">1 nonsynonymous","A33G L38W K48D R78L N120S",5
"lib2","SARS-CoV-2","TAAATGAAGACTCGAC",2,5.49,10.43,-0.41,0.27,2.52,1.06,0.02,">1 nonsynonymous","F8S N109Q I142N",3
"lib2","SARS-CoV-2","TAAATGAAGAGAAAAA",1,36.5,9.25,-1.58,0.07,2.88,1.05,0,">1 nonsynonymous","F62L I72L Y123F Y159M",4
"lib2","SARS-CoV-2","TAAATGAATCAATCTT",5,29.56,6,-4.84,1.73,1.5,1.25,0.05,">1 nonsynonymous","E10N L38E G101S",3
"lib2","SARS-CoV-2","TAAATGAATCCGTATC",4,32.69,6,-4.84,1.1,3,1.16,0.01,">1 nonsynonymous","T15S C49D P96L",3
"lib2","SARS-CoV-2","TAAATGACAAAACCAG",3,13.03,6,-4.84,2,3,1.11,0.02,">1 nonsynonymous","C49K S53G Y66T K87S",4
"lib2","SARS-CoV-2","TAAATGACAAAGGCGT",11,86.45,8.89,-1.95,0.29,1.5,1,0.05,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","TAAATGACATAGCAAC",2,19.33,6.18,-4.65,0.72,1.5,1.09,0.02,">1 nonsynonymous","Y35R D98C C102I N118H I142V G146Y",6
"lib2","SARS-CoV-2","TAAATGACATTGATAG",6,25.58,6.86,-3.97,0.48,1.5,1.36,0.04,">1 nonsynonymous","A42P N107W",2
"lib2","SARS-CoV-2","TAAATGACCCGCAAAT",3,123.58,10.9,0.07,0.05,2.93,1.06,0,"1 nonsynonymous","P197Y",1
"lib2","SARS-CoV-2","TAAATGACCGATGTAG",3,11.06,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V115S R124C",2
"lib2","SARS-CoV-2","TAAATGACTATCAGAA",11,23.31,6.98,-3.86,0.39,1.5,1.05,0.04,">1 nonsynonymous","Q84G L183P",2
"lib2","SARS-CoV-2","TAAATGAGAACATCAT",9,132.66,6,-4.83,0.49,1.5,1.13,0,">1 nonsynonymous","N64F C150Y",2
"lib2","SARS-CoV-2","TAAATGATACCGGACC",10,71.34,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R25E T55C T63K Q168L",4
"lib2","SARS-CoV-2","TAAATGATAGGGCTAC",15,210.74,9.34,-1.49,0.04,2.91,1.06,0,">1 nonsynonymous","T15L Y119K",2
"lib2","SARS-CoV-2","TAAATGATCACGAACT",1,10.06,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S45M Y50L N64Y C158P",4
"lib2","SARS-CoV-2","TAAATGATTTCCAATT",2,13.34,10.15,-0.69,0.07,2.51,1.5,0,">1 nonsynonymous","L5N K87P",2
"lib2","SARS-CoV-2","TAAATGCAACTAAGTA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","T100* W106N D137E G146*",4
"lib2","SARS-CoV-2","TAAATGCACCGAACAG",3,36.76,10.55,-0.28,0.04,2.93,1.09,0,">1 nonsynonymous","F8I N151S",2
"lib2","SARS-CoV-2","TAAATGCCCCTTAAAA",2,29.35,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C6F R25V F134L",3
"lib2","SARS-CoV-2","TAAATGCGAATCAATT",9,21.14,6.85,-3.98,0.54,1.5,1.17,0.07,">1 nonsynonymous","N1D T63N V77Y",3
"lib2","SARS-CoV-2","TAAATGCGATCTTTTA",2,18.09,10.51,-0.32,0.09,2.92,1.06,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TAAATGCGGACCAGAT",5,0.17,NA,NA,NA,NA,NA,NA,"stop","V20L Y35P T55I C61* T63R W106T C195S",7
"lib2","SARS-CoV-2","TAAATGCGGTTACGAA",23,579.2,10.85,0.01,0.05,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAATGCTCTACCTCG",22,265.41,9.8,-1.04,0.04,2.15,1.05,0,">1 nonsynonymous","K56G D98E N107G",3
"lib2","SARS-CoV-2","TAAATGCTGCTAGGTT",3,10.75,8.26,-2.58,0.24,2.91,1.15,0.02,">1 nonsynonymous","L125G F134S T170C",3
"lib2","SARS-CoV-2","TAAATGCTTGCTTCAC",9,123.15,8.45,-2.38,0.11,3,1.08,0.01,">1 nonsynonymous","S41R K87T G166K",3
"lib2","SARS-CoV-2","TAAATGGAAACTAACA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F T140L C158L",3
"lib2","SARS-CoV-2","TAAATGGAGCAAACCG",9,80.32,6,-4.84,1.19,1.5,1.16,0.01,">1 nonsynonymous","S45L T55P R73C",3
"lib2","SARS-CoV-2","TAAATGGAGCACAATA",6,0.53,NA,NA,NA,NA,NA,NA,"stop","S41* E76G K114Y",3
"lib2","SARS-CoV-2","TAAATGGAGTGCCGCG",7,266.51,7.78,-3.06,0.19,1.5,1.07,0.01,">1 nonsynonymous","C6S G51L",2
"lib2","SARS-CoV-2","TAAATGGATATGACTT",4,114.63,10.88,0.04,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATGGATATGCTTT",7,1.53,NA,NA,NA,NA,NA,NA,"stop","A14R A42L E141Q C158*",4
"lib2","SARS-CoV-2","TAAATGGATGCGTATA",6,47.35,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P7K Y35T N92L",3
"lib2","SARS-CoV-2","TAAATGGCATAGACCC",15,144.89,10.79,-0.05,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATGGCATTCCAAA",5,79.85,10.01,-0.82,0.09,2.68,1,0,">1 nonsynonymous","Y35S I104V N110M",3
"lib2","SARS-CoV-2","TAAATGGCTATATTAT",8,145.38,8.74,-2.1,0.05,2.78,1.06,0,">1 nonsynonymous","N1V T46S Y119L",3
"lib2","SARS-CoV-2","TAAATGGGCAGGAAAT",10,131.42,10.78,-0.06,0.04,2.95,1.07,0,"1 nonsynonymous","S147L",1
"lib2","SARS-CoV-2","TAAATGGGGCCCAGGA",2,42.58,10.09,-0.74,0.09,2.23,1.05,0,"1 nonsynonymous","L5G",1
"lib2","SARS-CoV-2","TAAATGGTAAAGCAAC",3,9.49,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F8W P54I L95G S184N",4
"lib2","SARS-CoV-2","TAAATGTAACCGATAA",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A K87W W106G",3
"lib2","SARS-CoV-2","TAAATGTACTATGTAC",10,64.48,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A18Q S41P D90R V182K",4
"lib2","SARS-CoV-2","TAAATGTACTTGACGT",5,61.64,10.88,0.05,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATGTAGCATTATG",2,0.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I28E",1
"lib2","SARS-CoV-2","TAAATGTAGTTGTTAG",2,13.54,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K48W V103R Y175F",3
"lib2","SARS-CoV-2","TAAATGTCCAATGAGT",12,59.2,9.33,-1.5,0.13,1.78,1.13,0.01,">1 nonsynonymous","P54M W106L S129N H189L",4
"lib2","SARS-CoV-2","TAAATGTCCCGATCTT",2,17.97,6,-4.84,2,1.5,1.29,0.07,"1 nonsynonymous","P177K",1
"lib2","SARS-CoV-2","TAAATGTCTCCCTAAG",5,48.54,10.82,-0.01,0.06,2.79,1.13,0,">1 nonsynonymous","Y39V P197G",2
"lib2","SARS-CoV-2","TAAATGTGCTTAAGAA",1,15.95,10.02,-0.82,0.1,2.64,1.06,0.01,">1 nonsynonymous","C6K K199G",2
"lib2","SARS-CoV-2","TAAATGTTAAATAGCA",3,0.23,NA,NA,NA,NA,NA,NA,"stop","G51C T85L D90* Y119L R136I",5
"lib2","SARS-CoV-2","TAAATGTTACCTATTA",3,6.3,6,-4.84,2,1.5,1.04,0.03,">1 nonsynonymous","R25G V71A V115L Q144R P149S",5
"lib2","SARS-CoV-2","TAAATGTTATAGTAAC",8,191.23,10.91,0.07,0.06,2.93,1.08,0,">1 nonsynonymous","T100R H189N",2
"lib2","SARS-CoV-2","TAAATGTTTACACGAT",1,0.86,NA,NA,NA,NA,NA,NA,"stop","V37L T63S K87T D97K Q176*",5
"lib2","SARS-CoV-2","TAAATTAAACTACTAG",5,49.41,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L5G G74P F99S N107A P161F",5
"lib2","SARS-CoV-2","TAAATTAAAGGATTGC",7,36.71,9.43,-1.4,0.38,1.5,1,0.06,">1 nonsynonymous","D98S N107A G155I S164R",4
"lib2","SARS-CoV-2","TAAATTAAAGTTCATA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64V F99S E141S",3
"lib2","SARS-CoV-2","TAAATTAAATAAACCT",17,119.54,10.84,0,0.05,2.89,1.11,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","TAAATTAACGAACTGG",1,36.25,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N1L N30I R127S P177T",4
"lib2","SARS-CoV-2","TAAATTAACGGAACAT",6,61.65,10.85,0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATTAACGGTTCCC",6,97.74,10.5,-0.33,0.05,2.94,1.03,0,">1 nonsynonymous","C61D E141F",2
"lib2","SARS-CoV-2","TAAATTAACTCCCTGG",7,133.41,6,-4.84,1.59,1.5,1.15,0.01,">1 nonsynonymous","Y93W F156P",2
"lib2","SARS-CoV-2","TAAATTAAGACAACCT",6,51.69,8.7,-2.14,0.17,1.5,1,0.01,">1 nonsynonymous","L5I S29T F44I V65Q I104W",5
"lib2","SARS-CoV-2","TAAATTAAGTATCGCG",13,228.35,9.73,-1.1,0.02,2.89,1.08,0,">1 nonsynonymous","D98A T170K",2
"lib2","SARS-CoV-2","TAAATTAATGCAGACA",9,146.49,10.7,-0.14,0.03,2.94,1.08,0,">1 nonsynonymous","V37G T55N S184W",3
"lib2","SARS-CoV-2","TAAATTAATGTAATTA",1,12.63,10,-0.84,0.18,2.15,1,0.02,">1 nonsynonymous","V37D A105F Y178F",3
"lib2","SARS-CoV-2","TAAATTACAAAGTAAG",8,43.51,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","E135G Y165S",2
"lib2","SARS-CoV-2","TAAATTACGACTTAGC",6,89.27,8.51,-2.32,0.11,2.49,1.13,0.01,">1 nonsynonymous","A42K Y123M E135I F156E",4
"lib2","SARS-CoV-2","TAAATTACGCTAAGAA",4,9.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S29R I104N S139H",3
"lib2","SARS-CoV-2","TAAATTACGGACCTCA",3,62.73,10.67,-0.16,0.04,2.98,1.04,0,"1 nonsynonymous","D98V",1
"lib2","SARS-CoV-2","TAAATTACTAGCAAAT",1,24.06,8.45,-2.38,0.08,2.17,1.08,0.01,">1 nonsynonymous","F44D N64R G116C",3
"lib2","SARS-CoV-2","TAAATTACTTTACTTA",3,36.39,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I88G N107P A192E T201Q",4
"lib2","SARS-CoV-2","TAAATTAGCGAATATA",5,79.92,9.11,-1.73,0.18,1.5,1.13,0.01,">1 nonsynonymous","D112E K128M F160I",3
"lib2","SARS-CoV-2","TAAATTAGGAGCCAAG",7,59.43,10.77,-0.07,0.09,2.83,1.13,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","TAAATTAGTCGGCGCC",3,185.74,9.19,-1.65,0.06,2.83,1.11,0,"1 nonsynonymous","G146K",1
"lib2","SARS-CoV-2","TAAATTATAACCTATC",2,0.81,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAAATTATAAGAATAA",10,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89V N107S T170Q",3
"lib2","SARS-CoV-2","TAAATTATAAGCCTAG",8,242.23,10.1,-0.73,0.02,2.9,1.08,0,">1 nonsynonymous","E10S P169L",2
"lib2","SARS-CoV-2","TAAATTATAATAATAA",9,77.53,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y93L I104A",2
"lib2","SARS-CoV-2","TAAATTATAATGTAAT",3,1.78,NA,NA,NA,NA,NA,NA,"stop","Y91I L131*",2
"lib2","SARS-CoV-2","TAAATTATATTACACT",5,77.66,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F44K S113L Q176S",3
"lib2","SARS-CoV-2","TAAATTATATTGATTA",6,68.72,7.45,-3.38,0.14,1.57,1.17,0.01,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","TAAATTATCATGCAAG",1,1.05,NA,NA,NA,NA,NA,NA,"stop","V52S D59* D137T",3
"lib2","SARS-CoV-2","TAAATTATCTTGCACT",3,13.13,10.06,-0.78,0.14,2.77,1.09,0.01,">1 nonsynonymous","V37E C61G S139H",3
"lib2","SARS-CoV-2","TAAATTATTCTCTGTA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S A89S W106P Q176G",4
"lib2","SARS-CoV-2","TAAATTATTCTTTCAT",12,1.79,NA,NA,NA,NA,NA,NA,"stop","W106S S129* P149L",3
"lib2","SARS-CoV-2","TAAATTCAAATGATTT",2,15.35,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","T15L P82I W106P S113K N120L P133H",6
"lib2","SARS-CoV-2","TAAATTCAACAATTAA",5,1.81,NA,NA,NA,NA,NA,NA,"stop","A14K I28R F70A S147* T201A",5
"lib2","SARS-CoV-2","TAAATTCAATCTTTAA",5,39.21,10.63,-0.2,0.04,2.81,1.18,0,">1 nonsynonymous","V37P P54L E141G",3
"lib2","SARS-CoV-2","TAAATTCACAAATAGA",5,35.21,8.09,-2.74,0.14,1.98,1.13,0.01,">1 nonsynonymous","K114G P161G",2
"lib2","SARS-CoV-2","TAAATTCACAACGTCC",11,1.08,NA,NA,NA,NA,NA,NA,"stop","N1R D90Y A105*",3
"lib2","SARS-CoV-2","TAAATTCAGAACGAAA",3,33.45,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A89Y E141R N157T",3
"lib2","SARS-CoV-2","TAAATTCAGCAACTAG",4,28.02,10.04,-0.8,0.05,2.93,1.05,0,">1 nonsynonymous","A18R K87C",2
"lib2","SARS-CoV-2","TAAATTCAGTTAAGTA",1,13.92,10.5,-0.33,0.07,3,1,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","TAAATTCATATAGATT",11,50.24,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G86W E141F",2
"lib2","SARS-CoV-2","TAAATTCATTAATGGA",3,7.39,NA,NA,NA,NA,NA,0.47,">1 nonsynonymous","F167G T201V",2
"lib2","SARS-CoV-2","TAAATTCCATCTATGT",13,152.49,10.78,-0.05,0.02,2.96,1.04,0,"1 nonsynonymous","D59N",1
"lib2","SARS-CoV-2","TAAATTCCCAGGGTGC",5,1.16,NA,NA,NA,NA,NA,NA,"stop","Y91* N120H Q144D Y175G K198R",5
"lib2","SARS-CoV-2","TAAATTCGAAGAGACC",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9A Y35V Y178A",3
"lib2","SARS-CoV-2","TAAATTCGAAGCAAGG",4,99.47,10.03,-0.8,0.06,2.61,1.09,0,">1 nonsynonymous","S19K S43A N64T S129E",4
"lib2","SARS-CoV-2","TAAATTCGCGGACATA",1,75.66,10.4,-0.44,0.04,3,1.04,0,"1 nonsynonymous","G174Q",1
"lib2","SARS-CoV-2","TAAATTCGCGTCATTA",6,83.07,10.3,-0.53,0.03,2.98,1.04,0,">1 nonsynonymous","C61L R78F",2
"lib2","SARS-CoV-2","TAAATTCTACGAAGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N D112Y",2
"lib2","SARS-CoV-2","TAAATTCTCGCAAGTC",7,3.31,NA,NA,NA,NA,NA,NA,"stop","I2* F44Y",2
"lib2","SARS-CoV-2","TAAATTCTGCACACCT",4,37.9,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I2T S29V S36E C49T G83P Q163P K199I",7
"lib2","SARS-CoV-2","TAAATTCTTAAATACG",15,6,NA,NA,NA,NA,NA,NA,"stop","S45H A81S G83C S113L N157* R179V",6
"lib2","SARS-CoV-2","TAAATTCTTCGAAATT",9,55.81,10.07,-0.77,0.1,2.41,1.13,0.01,">1 nonsynonymous","I80L S139R",2
"lib2","SARS-CoV-2","TAAATTCTTTACATAG",2,23.93,10.77,-0.07,0.07,3,1.03,0,">1 nonsynonymous","G83K P149Q",2
"lib2","SARS-CoV-2","TAAATTGAAAAACCCT",12,1.38,NA,NA,NA,NA,NA,NA,"stop","Y35W N40S D97L N120H S129I I142A P177*",7
"lib2","SARS-CoV-2","TAAATTGAACAGCTCA",8,34.79,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F44V D97E V115S Y119C Y143I N151M S164D",7
"lib2","SARS-CoV-2","TAAATTGAACCAGCCG",2,20.83,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4L L60Q L162P",3
"lib2","SARS-CoV-2","TAAATTGAACCTTGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","D34T T55N L60*",3
"lib2","SARS-CoV-2","TAAATTGAAGACCCCA",7,3.43,NA,NA,NA,NA,NA,NA,"stop","Y91L T140*",2
"lib2","SARS-CoV-2","TAAATTGAAGATAGTG",7,0.88,NA,NA,NA,NA,NA,NA,"stop","I88Y E135* G155N",3
"lib2","SARS-CoV-2","TAAATTGAAGTACCAA",7,87.62,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","R16S G83Y F99S F126L K132I G174H",6
"lib2","SARS-CoV-2","TAAATTGAAGTTGAAA",9,38.86,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","P133T L162K",2
"lib2","SARS-CoV-2","TAAATTGACCTATTCC",6,113.75,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","S113F Y121S",2
"lib2","SARS-CoV-2","TAAATTGATAAAATGT",32,356.73,10.84,0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAATTGATAATAATG",2,11.55,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","K87D G117H Y175L",3
"lib2","SARS-CoV-2","TAAATTGCAAAAAAAT",8,56.72,9.47,-1.37,0.14,2.18,1.1,0.01,">1 nonsynonymous","G9F V37M N107T",3
"lib2","SARS-CoV-2","TAAATTGCAAACCCCG",1,13.64,10.02,-0.82,0.09,2.12,1,0,">1 nonsynonymous","R127M D137V P197S",3
"lib2","SARS-CoV-2","TAAATTGCACCCAGTA",3,23.64,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9Q D98S P161H",3
"lib2","SARS-CoV-2","TAAATTGCGCGCCCTG",2,0,NA,NA,NA,NA,NA,NA,"stop","N107T F167R Y178*",3
"lib2","SARS-CoV-2","TAAATTGGAGTTAAGT",2,0,NA,NA,NA,NA,NA,NA,"stop","A33* P96S",2
"lib2","SARS-CoV-2","TAAATTGGCCTACGTT",2,44.06,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","I138L C150L G172A",3
"lib2","SARS-CoV-2","TAAATTGGCCTCGAAT",3,87.69,8.1,-2.74,0.21,1.5,1.04,0.02,">1 nonsynonymous","I28V L57A N120P",3
"lib2","SARS-CoV-2","TAAATTGGTACATACA",2,25.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6I V20M L60I S113P G152F",5
"lib2","SARS-CoV-2","TAAATTGTGTCCACTA",11,3.9,NA,NA,NA,NA,NA,NA,"stop","A42G D59V A89* R136W",4
"lib2","SARS-CoV-2","TAAATTGTTATAATTT",2,11.27,8.6,-2.24,0.42,1.99,1.03,0.07,">1 nonsynonymous","P7M S29R V37D L125E L183H",5
"lib2","SARS-CoV-2","TAAATTTAACGATATT",2,31.84,10.44,-0.4,0.08,2.83,1.06,0,">1 nonsynonymous","I2S A14S P54N",3
"lib2","SARS-CoV-2","TAAATTTAATCGACCC",1,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23G T55L G146R",3
"lib2","SARS-CoV-2","TAAATTTACCAATATT",3,9.23,10.57,-0.27,0.09,2.95,1.08,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","TAAATTTACGAGCAAG",4,41.28,9.49,-1.35,0.1,2.17,1.1,0.01,"1 nonsynonymous","A89M",1
"lib2","SARS-CoV-2","TAAATTTACGTTAGTC",6,82.44,9.02,-1.82,0.02,2.89,1.11,0,">1 nonsynonymous","T63S N130I N157S K199N",4
"lib2","SARS-CoV-2","TAAATTTACTAGGTGG",3,80.7,10.73,-0.11,0.03,2.91,1.12,0,">1 nonsynonymous","T3L C61E",2
"lib2","SARS-CoV-2","TAAATTTAGAGTATCT",2,9.68,6,-4.84,1.14,3,1.08,0.01,">1 nonsynonymous","Y39E L57Q D90A F99S T148M G174S",6
"lib2","SARS-CoV-2","TAAATTTAGCCGATAA",2,73.24,10.63,-0.2,0.04,2.98,1.04,0,">1 nonsynonymous","L5D N64K P149S S184V",4
"lib2","SARS-CoV-2","TAAATTTCACACACCA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L G101Y F156L",3
"lib2","SARS-CoV-2","TAAATTTCATTAACGG",4,49.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N120I G152A Y178P P197L",4
"lib2","SARS-CoV-2","TAAATTTCCGCTGCAA",3,37.15,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","N4D I88Q Q168L",3
"lib2","SARS-CoV-2","TAAATTTCTACGTGCC",3,7.77,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T15Y F44W P133L G152L",4
"lib2","SARS-CoV-2","TAAATTTCTCGTTGAG",8,67.33,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","W23P K48N Q176S",3
"lib2","SARS-CoV-2","TAAATTTGAAGGAATT",1,29.46,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C31W G86R",2
"lib2","SARS-CoV-2","TAAATTTGAATAATAA",15,5.12,NA,NA,NA,NA,NA,NA,"stop","S69V A105* Y165Q S200G",4
"lib2","SARS-CoV-2","TAAATTTTGGTAATAT",4,14.43,10.9,0.06,0.07,3,1.01,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","TAAATTTTTACTTTAA",1,2.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","TAACAAAAAAACTGAT",4,95.2,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D59H P177E",2
"lib2","SARS-CoV-2","TAACAAAAAAACTTCT",21,211.33,8.8,-2.04,0.06,2.91,1.1,0,">1 nonsynonymous","T100R E141F G166I",3
"lib2","SARS-CoV-2","TAACAAAAAAACTTTC",7,93.08,10.54,-0.29,0.03,2.92,1.05,0,">1 nonsynonymous","L5I G155S",2
"lib2","SARS-CoV-2","TAACAAAAAAGCAGAT",3,40.97,10.2,-0.64,0.04,2.98,1.04,0,">1 nonsynonymous","A14V N151H",2
"lib2","SARS-CoV-2","TAACAAAAAATGTCAA",3,17.36,6.43,-4.4,0.76,1.5,1.26,0.03,">1 nonsynonymous","D34L P133Q",2
"lib2","SARS-CoV-2","TAACAAAAAGGTTCTA",3,36.32,6,-4.84,0.72,3,1.12,0,">1 nonsynonymous","G155R Q176P",2
"lib2","SARS-CoV-2","TAACAAAAATACGAGG",6,0.62,NA,NA,NA,NA,NA,NA,"stop","V11S S19R F47L P82K N118G T148S N151*",7
"lib2","SARS-CoV-2","TAACAAAAATCAGTTG",7,48.46,10.81,-0.02,0.05,2.96,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACAAAACATTGCCA",6,130.09,10.24,-0.6,0.06,2.79,1.01,0,">1 nonsynonymous","T55E L60P K128M",3
"lib2","SARS-CoV-2","TAACAAAAGAAATCCA",19,349.15,9.96,-0.88,0.05,2.87,1.05,0,">1 nonsynonymous","P7K N110S Q168T L188Q",4
"lib2","SARS-CoV-2","TAACAAAAGCACTAGT",3,84.94,10.26,-0.57,0.03,2.94,1.07,0,">1 nonsynonymous","S41V E154N",2
"lib2","SARS-CoV-2","TAACAAAAGGATCCAG",1,62.1,9.44,-1.39,0.1,2.56,1.06,0,">1 nonsynonymous","A42L D97H S129F E154L",4
"lib2","SARS-CoV-2","TAACAAAAGGGTGCCC",8,114.43,10.85,0.01,0.04,2.97,1.06,0,"1 nonsynonymous","A190H",1
"lib2","SARS-CoV-2","TAACAAAAGTAAGATT",9,0,NA,NA,NA,NA,NA,NA,"stop","S53D D112* N118Y V153E P161S",5
"lib2","SARS-CoV-2","TAACAAAAGTGGTTAA",7,123.06,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D68F G86L F156L",3
"lib2","SARS-CoV-2","TAACAAAATAAACATT",2,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E E10L C102Q I138S",4
"lib2","SARS-CoV-2","TAACAAAATAAATTAG",3,26.24,6,-4.84,2,3,1.09,0,">1 nonsynonymous","A42L D68M C150T",3
"lib2","SARS-CoV-2","TAACAAAATACCTATG",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S W106R",2
"lib2","SARS-CoV-2","TAACAAAATCCAATCA",16,5.91,NA,NA,NA,NA,NA,NA,"stop","V32*",1
"lib2","SARS-CoV-2","TAACAAAATTCAGTCT",9,142.14,9.2,-1.63,0.04,2.92,1.09,0,"1 nonsynonymous","F156D",1
"lib2","SARS-CoV-2","TAACAAAATTTGAATA",15,135.9,7.86,-2.98,0.12,1.5,1.15,0,">1 nonsynonymous","T3S I28G L57I Y119K",4
"lib2","SARS-CoV-2","TAACAAACAAAATCTT",4,67.49,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R73F P169S",2
"lib2","SARS-CoV-2","TAACAAACAATTTTTA",3,23.01,8.9,-1.94,0.15,1.74,1.03,0.02,">1 nonsynonymous","S41F V103L",2
"lib2","SARS-CoV-2","TAACAAACCGTTGCCT",4,98.07,10.68,-0.15,0.03,2.96,1.03,0,">1 nonsynonymous","A33T T100L",2
"lib2","SARS-CoV-2","TAACAAACGAAGTGCT",2,8.98,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N4T N13S A33P P82S S113N Y143R G174E Q176K",8
"lib2","SARS-CoV-2","TAACAAACGATCTAAA",3,63.71,10.06,-0.78,0.06,2.8,1.05,0,">1 nonsynonymous","A14E P149M T193Y V194G",4
"lib2","SARS-CoV-2","TAACAAACTAACATCG",6,57.72,10.83,0,0.05,2.97,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACAAACTCACATAG",3,57.41,10.81,-0.02,0.05,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACAAACTCCGACAG",1,42.17,9.41,-1.43,0.1,1.86,1.06,0,"1 nonsynonymous","D137A",1
"lib2","SARS-CoV-2","TAACAAACTTATAAGA",5,34.96,10.06,-0.78,0.11,1.96,1.04,0,">1 nonsynonymous","N24A D97S P133I",3
"lib2","SARS-CoV-2","TAACAAAGAAATGGAC",2,0,NA,NA,NA,NA,NA,NA,"stop","E10W L95S P149*",3
"lib2","SARS-CoV-2","TAACAAAGAACCTCAA",3,15.29,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","L5Y C61I Y91S G101F F160L",5
"lib2","SARS-CoV-2","TAACAAAGAACTCGCA",8,36.61,6.12,-4.72,0.81,1.5,1.2,0.02,">1 nonsynonymous","Y35Q C49A T100I",3
"lib2","SARS-CoV-2","TAACAAAGACGCATTA",1,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68G C102R P149L",3
"lib2","SARS-CoV-2","TAACAAAGCGAATAGT",8,326.94,8.44,-2.4,0.1,2.95,1.02,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","TAACAAAGGTGACTTA",5,191.4,10.49,-0.34,0.06,2.85,1.02,0,">1 nonsynonymous","T3C D98S",2
"lib2","SARS-CoV-2","TAACAAATAAGGTCAT",11,74.31,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","TAACAAATACCCTCGA",4,171.72,10.86,0.03,0.05,2.92,1.09,0,"1 nonsynonymous","P149A",1
"lib2","SARS-CoV-2","TAACAAATATGCCCTG",1,11.37,10.73,-0.1,0.09,2.9,1.16,0,"1 nonsynonymous","Y39K",1
"lib2","SARS-CoV-2","TAACAAATATTGCTTA",1,54.29,10.37,-0.47,0.04,2.89,1.06,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","TAACAAATCCTCGTAC",5,32.13,7.88,-2.96,0.42,1.5,1.17,0.05,">1 nonsynonymous","D137L K199L",2
"lib2","SARS-CoV-2","TAACAAATCCTGATGG",3,35.15,9.89,-0.95,0.05,2.87,1,0,">1 nonsynonymous","I104C P169A",2
"lib2","SARS-CoV-2","TAACAAATCTATTTCG",1,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R N64V G101Q",3
"lib2","SARS-CoV-2","TAACAAATTACTCAAG",15,86.19,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","N40Y L60Y K87I V103G Y143I",5
"lib2","SARS-CoV-2","TAACAAATTGTCGAAT",6,28.08,10.17,-0.67,0.03,2.91,1.03,0,">1 nonsynonymous","I2Y V11I R16N T100N I142H",5
"lib2","SARS-CoV-2","TAACAAATTTAAACTG",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6D S19E T63W L95F",4
"lib2","SARS-CoV-2","TAACAAATTTTAATCT",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P T85H G101C W106P F156H Y165R Y178S",7
"lib2","SARS-CoV-2","TAACAACAAGAGTGAT",8,107.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9R N157M V173T",3
"lib2","SARS-CoV-2","TAACAACAAGTAGGTT",4,41.48,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","L5R C61G K94Q P149M G155L",5
"lib2","SARS-CoV-2","TAACAACAGATACCAT",18,447.22,10.85,0.02,0.04,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACAACAGGATTGTC",4,44.35,10.3,-0.54,0.07,2.62,1.08,0,"1 nonsynonymous","P133N",1
"lib2","SARS-CoV-2","TAACAACATATAAGAA",8,45.52,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S45L T63A Q84P F99Y N120K A192T",6
"lib2","SARS-CoV-2","TAACAACATCGTACCG",2,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12N D34P T63P",3
"lib2","SARS-CoV-2","TAACAACCAAACAAAA",5,47.11,6,-4.83,1.11,1.5,1.27,0.03,">1 nonsynonymous","G101R G155M",2
"lib2","SARS-CoV-2","TAACAACCAAATCTTC",3,0.52,NA,NA,NA,NA,NA,NA,"stop","Y35V F126L N151*",3
"lib2","SARS-CoV-2","TAACAACCAACAAGTG",8,61.4,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K26M E135P",2
"lib2","SARS-CoV-2","TAACAACCCACCGAAT",3,1.57,NA,NA,NA,NA,NA,NA,"stop","A14G N64W P96* D112P F160V",5
"lib2","SARS-CoV-2","TAACAACCTATAGCAG",6,36.99,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D98L R136S Y178D",3
"lib2","SARS-CoV-2","TAACAACGCATAGGAG",28,446.97,10.77,-0.07,0.03,2.93,1.07,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","TAACAACGCCATAAAT",13,174.53,9.36,-1.48,0.04,2.9,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TAACAACGCCCTATAG",7,11.15,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1W N64K K87R V103D F185T",5
"lib2","SARS-CoV-2","TAACAACTAAGTTAAA",8,45.5,10.75,-0.09,0.06,2.81,1.18,0,"1 nonsynonymous","L131I",1
"lib2","SARS-CoV-2","TAACAACTCAAGTCAT",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I S53G Y91C I104Y N157R",5
"lib2","SARS-CoV-2","TAACAACTGTAATAAA",6,39.92,11.04,0.21,0.05,2.99,1.02,0,">1 nonsynonymous","V37N K56S L122T S147N",4
"lib2","SARS-CoV-2","TAACAACTGTGAACAT",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108E Y121W E141G Y159F L183P",5
"lib2","SARS-CoV-2","TAACAACTTACAATAG",20,227.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56M V77K S139R T201N",4
"lib2","SARS-CoV-2","TAACAAGAAATTTTAC",6,107.1,6.14,-4.7,0.86,1.5,1.15,0.02,">1 nonsynonymous","N58C D90S Y119S G146T",4
"lib2","SARS-CoV-2","TAACAAGAATGACGAA",2,16.96,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F99S T201H",2
"lib2","SARS-CoV-2","TAACAAGACACCACGG",6,119.92,7.29,-3.54,0.16,1.72,1.12,0.01,"1 nonsynonymous","C150D",1
"lib2","SARS-CoV-2","TAACAAGATAACAAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C6V A14V S113R Y119* Y178C",5
"lib2","SARS-CoV-2","TAACAAGATGTGATAG",2,22.71,9.3,-1.53,0.19,1.5,1,0.03,"1 nonsynonymous","Y50A",1
"lib2","SARS-CoV-2","TAACAAGCACAAACCT",4,36.25,10.76,-0.07,0.05,3,1.02,0,"1 nonsynonymous","K132Y",1
"lib2","SARS-CoV-2","TAACAAGCACGTATTT",9,103.56,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y91S P161T K198R",3
"lib2","SARS-CoV-2","TAACAAGGATGGGTTA",1,10.09,10.41,-0.42,0.15,2.19,1.02,0.02,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","TAACAAGGCCGACATT",4,8.55,9.38,-1.46,0.07,3,1,0,"1 nonsynonymous","G166Q",1
"lib2","SARS-CoV-2","TAACAAGGGATGTAGT",3,0.54,NA,NA,NA,NA,NA,NA,"stop","I28W L95I I104D R127I N157P L162*",6
"lib2","SARS-CoV-2","TAACAAGGGGCGACGG",18,206.89,10.85,0.01,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACAAGGTGGCATTT",3,8.58,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N4A L95G",2
"lib2","SARS-CoV-2","TAACAAGTAAAATCCA",8,64.37,10.82,-0.01,0.08,2.98,1.06,0,"1 nonsynonymous","T55E",1
"lib2","SARS-CoV-2","TAACAAGTCTTGCCGG",1,26.39,10.83,0,0.07,3,1,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","TAACAAGTGATTAAGT",14,46.52,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","N1K A42S K87C L95M Y119V R136S C150K",7
"lib2","SARS-CoV-2","TAACAAGTGTGTTGTG",4,22.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89E Y119Q G172A",3
"lib2","SARS-CoV-2","TAACAATACTTTATAG",1,14.03,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","G155V Y175K",2
"lib2","SARS-CoV-2","TAACAATATAAGAATA",11,2.87,NA,NA,NA,NA,NA,NA,"stop","L5* Y123L",2
"lib2","SARS-CoV-2","TAACAATATAAGGTAT",1,25,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","L5Q F12W A33P F62I D90R W106Y C158R",7
"lib2","SARS-CoV-2","TAACAATATGGCGGCT",3,12.68,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Q84F L95M S113V",3
"lib2","SARS-CoV-2","TAACAATCAAATTACG",10,4.18,NA,NA,NA,NA,NA,NA,"stop","V77* C158W L162F",3
"lib2","SARS-CoV-2","TAACAATCAGGGATTT",11,166.16,10.6,-0.23,0.03,2.92,1.09,0,"1 nonsynonymous","K87T",1
"lib2","SARS-CoV-2","TAACAATCATTTATGA",4,38.53,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D59S N92I",2
"lib2","SARS-CoV-2","TAACAATCCAAACCCA",1,34.85,9.55,-1.29,0.12,1.88,1.12,0,"1 nonsynonymous","Y178K",1
"lib2","SARS-CoV-2","TAACAATGCAAACTGA",4,159.71,9.19,-1.65,0.06,2.76,1.06,0,">1 nonsynonymous","A42V G116I S164G",3
"lib2","SARS-CoV-2","TAACAATGCATCTGAG",2,0.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","TAACAATTATCTCCTT",21,168.5,10.77,-0.07,0.04,2.91,1.1,0,">1 nonsynonymous","C61R A192E",2
"lib2","SARS-CoV-2","TAACAATTATGCGGTT",6,51.1,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C61V L162E",2
"lib2","SARS-CoV-2","TAACAATTGGGACTAA",2,44.53,9.74,-1.1,0.09,2.22,1.03,0,">1 nonsynonymous","N1K Q84V Y91V",3
"lib2","SARS-CoV-2","TAACAATTTAGCCATC",3,16.98,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23L T55P A67T W106L",4
"lib2","SARS-CoV-2","TAACAATTTCCCCCGC",10,170.78,10.7,-0.14,0.04,2.91,1.09,0,"1 nonsynonymous","S53G",1
"lib2","SARS-CoV-2","TAACACAAAACTGAGG",6,32.9,9.64,-1.2,0.14,2.24,1.1,0.01,">1 nonsynonymous","L57S D97G V173D",3
"lib2","SARS-CoV-2","TAACACAAACTATTAC",1,39.57,8.99,-1.85,0.1,2.78,1.04,0,">1 nonsynonymous","Y91S G166A",2
"lib2","SARS-CoV-2","TAACACAAATACGACG",4,28.28,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","V11C L38R G166V",3
"lib2","SARS-CoV-2","TAACACAAATTCCGAA",9,130.98,9.91,-0.92,0.06,2.36,1.01,0,"1 nonsynonymous","F8A",1
"lib2","SARS-CoV-2","TAACACAACACGTGCC",6,75,9.59,-1.24,0.11,1.82,1.03,0.01,">1 nonsynonymous","Y35N Q84F",2
"lib2","SARS-CoV-2","TAACACAACCTAGGAC",8,18.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40T L60P D90G G155Y",4
"lib2","SARS-CoV-2","TAACACAAGACCTGCT",9,85.49,9.66,-1.18,0.1,2.37,1.03,0,">1 nonsynonymous","C6S N58W",2
"lib2","SARS-CoV-2","TAACACAAGAGCCAGA",1,24.85,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L95N S129Q",2
"lib2","SARS-CoV-2","TAACACACAAAAGAAA",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146C Q168S",2
"lib2","SARS-CoV-2","TAACACACACCGGTTA",1,35.42,8.92,-1.91,0.09,2.9,1.1,0,">1 nonsynonymous","F12L K87R Y119K",3
"lib2","SARS-CoV-2","TAACACACATATAGAA",6,43.27,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y91K F99I N110Q",3
"lib2","SARS-CoV-2","TAACACACATCTGAAA",8,133.8,9.25,-1.59,0.09,1.72,1.11,0,">1 nonsynonymous","T55S A89T K94A Q163H",4
"lib2","SARS-CoV-2","TAACACACCTTTAGAT",1,10.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5R K94P",2
"lib2","SARS-CoV-2","TAACACACTCCTACAA",5,40.72,9.68,-1.16,0.13,2.31,1.01,0.01,"1 nonsynonymous","G51W",1
"lib2","SARS-CoV-2","TAACACACTCGGATAT",10,81.81,10.91,0.08,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACACACTTCAACAC",1,26.18,8.66,-2.18,0.09,2.76,1,0,">1 nonsynonymous","A33Y T55E T170I",3
"lib2","SARS-CoV-2","TAACACAGAAAGATCA",6,138.13,10.2,-0.64,0.04,2.72,1.09,0,">1 nonsynonymous","R16T A67T D97K",3
"lib2","SARS-CoV-2","TAACACAGCTTGTCAT",4,12.29,6.09,-4.75,1.38,1.5,1.12,0.06,">1 nonsynonymous","S43P N92I N120I",3
"lib2","SARS-CoV-2","TAACACATAACCACAT",2,46.08,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L95Q S129F",2
"lib2","SARS-CoV-2","TAACACATAATAAGAA",2,109.29,9.58,-1.26,0.04,2.88,1.09,0,">1 nonsynonymous","Y119F Q144S",2
"lib2","SARS-CoV-2","TAACACATATGTAATT",2,12.46,6,-4.84,2,3,1.2,0.02,"1 nonsynonymous","V103D",1
"lib2","SARS-CoV-2","TAACACATCGATAAAA",7,46.19,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A33H D112S G155S",3
"lib2","SARS-CoV-2","TAACACATGTACACTG",5,56.48,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D98Q P161V N171P",3
"lib2","SARS-CoV-2","TAACACATTTAATCGC",4,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L60E G86K Y119D",4
"lib2","SARS-CoV-2","TAACACCACTAAAACA",1,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A G51T",2
"lib2","SARS-CoV-2","TAACACCCAGACACAA",3,46.41,10.87,0.03,0.08,2.83,1.19,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","TAACACCCAGATATAA",6,119.17,9.16,-1.68,0.04,2.93,1.08,0,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","TAACACCCCAAACTAT",4,195.08,9.06,-1.78,0.09,1.56,1.1,0,"1 nonsynonymous","R25W",1
"lib2","SARS-CoV-2","TAACACCCGTGGTACC",16,172.89,6,-4.84,1.87,1.5,1.19,0.02,">1 nonsynonymous","N64L E141K L162R Q168D T201I",5
"lib2","SARS-CoV-2","TAACACCGAAAACGTG",7,113.86,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P7M D34K C61S A105K P161C",5
"lib2","SARS-CoV-2","TAACACCGCCATGCTA",7,162.08,10.66,-0.17,0.03,2.93,1.08,0,">1 nonsynonymous","A42M K48S T63S",3
"lib2","SARS-CoV-2","TAACACCGGAGTACTA",13,244.74,9.42,-1.41,0.05,2.76,1.09,0,">1 nonsynonymous","N24Y Q168M",2
"lib2","SARS-CoV-2","TAACACCGTTAAGAAA",5,54.24,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I88D D112K L183I",3
"lib2","SARS-CoV-2","TAACACCTCACCTGTT",8,91.36,10.27,-0.56,0.04,2.82,1.01,0,">1 nonsynonymous","K56F G146A Y178F",3
"lib2","SARS-CoV-2","TAACACCTTTAATACC",3,28.96,9.84,-1,0.09,2.56,1.06,0,">1 nonsynonymous","L57R R78S Q144A",3
"lib2","SARS-CoV-2","TAACACCTTTAGTGGA",10,1.21,NA,NA,NA,NA,NA,NA,"stop","F17* A42T P54Y P96E N120R I142R",6
"lib2","SARS-CoV-2","TAACACGAAAAAACCC",10,137.68,10.31,-0.53,0.03,2.85,1.08,0,">1 nonsynonymous","T100S S129F",2
"lib2","SARS-CoV-2","TAACACGACCCCACCT",12,3.92,NA,NA,NA,NA,NA,NA,"stop","T85E Y91R G146F N151* F160L",5
"lib2","SARS-CoV-2","TAACACGATCTTTGCG",2,43.06,8.09,-2.74,0.18,1.62,1.09,0.01,">1 nonsynonymous","G116S N157Y",2
"lib2","SARS-CoV-2","TAACACGATGAAGACT",1,11.14,7.84,-3,0.2,2.34,1.13,0.02,">1 nonsynonymous","F8A A14S L125A",3
"lib2","SARS-CoV-2","TAACACGCTTAAAAGA",8,99.97,7.58,-3.25,0.28,1.5,1.07,0.02,">1 nonsynonymous","N1K N107L N120K T140L",4
"lib2","SARS-CoV-2","TAACACGGATCATTCC",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90N W106V L122I S129A G146A Q163D",6
"lib2","SARS-CoV-2","TAACACGGTTGACATA",6,5.12,NA,NA,NA,NA,NA,NA,"stop","P7* Q84S A105V",3
"lib2","SARS-CoV-2","TAACACGTAACTAACC",3,0,NA,NA,NA,NA,NA,NA,"stop","S69* D90Y V103L S147P",4
"lib2","SARS-CoV-2","TAACACGTCCCCAGAA",2,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30S F99E Q163H",3
"lib2","SARS-CoV-2","TAACACGTTACAGGTT",5,14.67,8.31,-2.53,0.3,1.5,1.02,0.03,">1 nonsynonymous","V11T D97Y R127A",3
"lib2","SARS-CoV-2","TAACACGTTCTATCTT",1,6.1,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","A33S S53Q L60R E76S R78P G83Q N110Y",7
"lib2","SARS-CoV-2","TAACACGTTGTCCAAG",4,34.89,6.11,-4.73,1.41,1.5,1.18,0.06,">1 nonsynonymous","D68A C195S",2
"lib2","SARS-CoV-2","TAACACTAAGCGTAAC",22,431.47,9.64,-1.2,0.06,2.3,1.06,0,">1 nonsynonymous","D98A N107R",2
"lib2","SARS-CoV-2","TAACACTAAGCTCATA",5,64.65,10.87,0.03,0.04,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACACTATATATTAA",8,43.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y91T D112N S113Q",3
"lib2","SARS-CoV-2","TAACACTATCTTTTAA",5,35.76,9.89,-0.94,0.09,2.41,1.09,0,">1 nonsynonymous","R127H N151K",2
"lib2","SARS-CoV-2","TAACACTATTATACCT",3,37.07,6.32,-4.52,0.73,1.5,1.06,0.04,">1 nonsynonymous","L95F R124A L131V",3
"lib2","SARS-CoV-2","TAACACTCATGCAAGG",5,102.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6T Y119V P133L S139N",4
"lib2","SARS-CoV-2","TAACACTCCACATTAG",4,65.11,9.65,-1.19,0.03,2.89,1.12,0,">1 nonsynonymous","A42G Y119S N130P",3
"lib2","SARS-CoV-2","TAACACTCCTTAACAA",10,40.3,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3W G9Y Q84L Y91G Q163V",5
"lib2","SARS-CoV-2","TAACACTGCATCTGTA",1,11.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25P K48Q",2
"lib2","SARS-CoV-2","TAACACTTGAAAGACT",19,7.72,NA,NA,NA,NA,NA,NA,"stop","K114L N120* F126L F167V",4
"lib2","SARS-CoV-2","TAACACTTTAATTTAT",2,94.34,9.32,-1.52,0.06,1.79,1.08,0,">1 nonsynonymous","Y39S K94F",2
"lib2","SARS-CoV-2","TAACAGAAAGACATTT",3,26.33,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C61L N92I E141R F167V",4
"lib2","SARS-CoV-2","TAACAGAAGACTAAGT",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V D90V G101L P169H",4
"lib2","SARS-CoV-2","TAACAGAAGACTCTAA",15,0.81,NA,NA,NA,NA,NA,NA,"stop","V11L S41E V65* K128S S147F F167R",6
"lib2","SARS-CoV-2","TAACAGACATGTCTGT",3,0.21,NA,NA,NA,NA,NA,NA,"stop","D34M K87R Y91* T100N G155H",5
"lib2","SARS-CoV-2","TAACAGACTAGTTCCC",9,130.75,7.7,-3.14,0.15,1.5,1.04,0.01,">1 nonsynonymous","N58E Y121T Q168L",3
"lib2","SARS-CoV-2","TAACAGACTTCAAAAA",10,124.76,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L5R N64D P96L N110Y Y119L E154L",6
"lib2","SARS-CoV-2","TAACAGAGAAACAATA",9,133.5,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","L60S G152P P161F",3
"lib2","SARS-CoV-2","TAACAGATACACGGTT",6,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105S G166A",2
"lib2","SARS-CoV-2","TAACAGATAGAGAACT",7,135.07,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I2K V11R N107T K198M",4
"lib2","SARS-CoV-2","TAACAGATATGAACCC",13,2209.84,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N110K N120A F167P Y178I H189I",5
"lib2","SARS-CoV-2","TAACAGCAAAAGGCAA",7,90.5,10.75,-0.09,0.04,2.89,1.1,0,">1 nonsynonymous","I104L K198C",2
"lib2","SARS-CoV-2","TAACAGCCCCAACATG",6,13.45,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","A42P G51N A89K N107Q P133W Y178G",6
"lib2","SARS-CoV-2","TAACAGCCGTTAAATA",5,52.94,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S36L F99S",2
"lib2","SARS-CoV-2","TAACAGCCTTAGATAG",14,71.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25A Y91V R127V F160A",4
"lib2","SARS-CoV-2","TAACAGCTAGTAGAAG",6,67.48,10.1,-0.73,0.08,2.6,1.07,0,">1 nonsynonymous","R16L V37W D90S F134L",4
"lib2","SARS-CoV-2","TAACAGGAATAAGGCA",3,21.27,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G86S K94C G155L",3
"lib2","SARS-CoV-2","TAACAGGACAAAGTTT",3,45.55,9.13,-1.71,0.11,1.75,1.13,0.01,">1 nonsynonymous","F12A K128I I138K S147N",4
"lib2","SARS-CoV-2","TAACAGGCAGCAAAAT",5,151.97,10.37,-0.46,0.04,2.88,1.08,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TAACAGGCCCTATCAC",2,73.61,10.96,0.13,0.06,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACAGGGCCACGTTC",3,38.74,9.77,-1.06,0.11,2.42,1,0.01,">1 nonsynonymous","N13Y L122D K128T",3
"lib2","SARS-CoV-2","TAACAGGTAGTACCAA",4,19.73,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","N58K V77D N110I G116W Q144N F156D S184A",7
"lib2","SARS-CoV-2","TAACAGGTTCGACCTA",3,6.61,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A89L P96L L111R D137K",4
"lib2","SARS-CoV-2","TAACAGGTTTAATACC",2,81.41,10.75,-0.09,0.03,3,1.01,0,">1 nonsynonymous","A33T T55L H189N T201L",4
"lib2","SARS-CoV-2","TAACAGTAATAATTAT",1,6.36,6,-4.84,0.9,3,1.03,0,">1 nonsynonymous","G51T D97M Y123D",3
"lib2","SARS-CoV-2","TAACAGTAATCACGAG",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I G51N",2
"lib2","SARS-CoV-2","TAACAGTATCAATTGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34L K48V G101S D112A K128R G146Y",6
"lib2","SARS-CoV-2","TAACAGTATTATCTAA",10,118.77,10.86,0.03,0.07,2.88,1.12,0,">1 nonsynonymous","R16K K128L P197L",3
"lib2","SARS-CoV-2","TAACAGTCAAACGGTG",13,202.35,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S36K N58S P177I",3
"lib2","SARS-CoV-2","TAACAGTCATCACCTA",7,112.81,10.67,-0.16,0.04,2.95,1.05,0,">1 nonsynonymous","C61S H189Y",2
"lib2","SARS-CoV-2","TAACAGTCCGTGTTCT",1,39.54,10.01,-0.82,0.08,2.97,1.01,0,">1 nonsynonymous","N4Y G146D",2
"lib2","SARS-CoV-2","TAACAGTCTCCAACTT",6,128.58,9.26,-1.58,0.04,2.95,1.09,0,"1 nonsynonymous","G166T",1
"lib2","SARS-CoV-2","TAACAGTTCAGAACCC",3,0,NA,NA,NA,NA,NA,NA,"stop","L5E N24* C61W V115S I142D C158A",6
"lib2","SARS-CoV-2","TAACAGTTCTTAAGTC",9,152.71,9.11,-1.73,0.14,1.5,1.07,0.01,">1 nonsynonymous","I138N V173T",2
"lib2","SARS-CoV-2","TAACATAAATTATGAC",1,0.12,NA,NA,NA,NA,NA,NA,"stop","K87R F99* G116Y K198V",4
"lib2","SARS-CoV-2","TAACATAACCACCGTT",8,67.45,6,-4.84,0.92,1.5,1.14,0.01,">1 nonsynonymous","E76S Q176K",2
"lib2","SARS-CoV-2","TAACATAACGACTTCG",2,12.46,10.37,-0.47,0.1,2.88,1.06,0,">1 nonsynonymous","G9S D34G T55S",3
"lib2","SARS-CoV-2","TAACATAACTAGACGC",1,12.47,10.7,-0.14,0.09,3,1.05,0,">1 nonsynonymous","C61N G152H",2
"lib2","SARS-CoV-2","TAACATAAGATATGTT",2,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S T85M",2
"lib2","SARS-CoV-2","TAACATAATAGTACAC",2,99.29,8.23,-2.61,0.19,1.77,1.11,0.01,">1 nonsynonymous","T63S I88M Y119P F156V",4
"lib2","SARS-CoV-2","TAACATACATATGTAC",9,4.08,NA,NA,NA,NA,NA,NA,"stop","E10* K26M V37K C158P",4
"lib2","SARS-CoV-2","TAACATACGAAAACTT",4,59.02,9.02,-1.82,0.07,2.95,1.05,0,">1 nonsynonymous","G117L F160Q",2
"lib2","SARS-CoV-2","TAACATACGAAAAGTG",10,1636.77,10.74,-0.09,0.03,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACATACGACCCTAT",1,0.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R A42S L57I D68Y R78L",5
"lib2","SARS-CoV-2","TAACATACGATAGTGG",2,0,NA,NA,NA,NA,NA,NA,"stop","W23* T46H I80K Y123G V153L",5
"lib2","SARS-CoV-2","TAACATACTAATTGAA",8,60.91,10.42,-0.42,0.04,2.98,1.05,0,">1 nonsynonymous","S41L A145V",2
"lib2","SARS-CoV-2","TAACATAGAAACCAGT",5,10.96,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R27L G86S V103S",3
"lib2","SARS-CoV-2","TAACATAGACTGAAAG",11,81.46,10.76,-0.08,0.06,2.85,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACATAGAGAATATA",3,47.28,9.97,-0.86,0.05,2.91,1.08,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","TAACATAGCATGTTTA",11,7.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3A N13R V77G",3
"lib2","SARS-CoV-2","TAACATAGTAGACGGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A L122W T170M",3
"lib2","SARS-CoV-2","TAACATAGTGTTAATC",6,1.43,NA,NA,NA,NA,NA,NA,"stop","N1R E10A R16T P82W K94* T201N",6
"lib2","SARS-CoV-2","TAACATATCTCGGTAT",4,37.79,10.43,-0.41,0.05,2.84,1.16,0,">1 nonsynonymous","S113C Q168F",2
"lib2","SARS-CoV-2","TAACATATTCCTTATC",17,201.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D112N P177I T201S",3
"lib2","SARS-CoV-2","TAACATATTTTGATTC",2,19.22,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","A22S D34E V103R",3
"lib2","SARS-CoV-2","TAACATCACCCCCTAT",9,114.44,8,-2.83,0.16,1.5,1.13,0.01,">1 nonsynonymous","N40T Y123L Y143M F160I",4
"lib2","SARS-CoV-2","TAACATCATAAATATC",2,21.24,8.59,-2.24,0.26,1.5,1.04,0.03,">1 nonsynonymous","L5Y F12N S45N S184Y",4
"lib2","SARS-CoV-2","TAACATCCAATTGCAT",9,110.31,10.79,-0.05,0.05,2.93,1.07,0,"1 nonsynonymous","L60E",1
"lib2","SARS-CoV-2","TAACATCGAAAAAACT",4,13.9,10.74,-0.09,0.07,2.99,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACATCGCACTCACA",2,64.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F99T N120T P177Y",3
"lib2","SARS-CoV-2","TAACATCGCTCCTGCC",3,37.25,9.36,-1.48,0.15,1.85,1.12,0.01,">1 nonsynonymous","L5R G51N D59G D97A F134S N151T",6
"lib2","SARS-CoV-2","TAACATCGTAGCATGA",4,34.34,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N58Y R73S D112K",3
"lib2","SARS-CoV-2","TAACATCTAAATCTAA",4,41.69,9.21,-1.63,0.11,2.21,1.1,0.01,">1 nonsynonymous","F47V V52L D59P K87S D97A",5
"lib2","SARS-CoV-2","TAACATCTATTTACTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L K128E",2
"lib2","SARS-CoV-2","TAACATCTCACAGCTA",2,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K G51R T100L K128I",4
"lib2","SARS-CoV-2","TAACATGAAACCATTT",8,22.12,10.15,-0.69,0.06,2.97,1.01,0,">1 nonsynonymous","F12V T140H",2
"lib2","SARS-CoV-2","TAACATGAAATCCGGA",1,2.9,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165G",1
"lib2","SARS-CoV-2","TAACATGAAATTCCAA",13,111.43,9.25,-1.59,0.11,1.5,1.1,0,">1 nonsynonymous","S36A L60R W106L",3
"lib2","SARS-CoV-2","TAACATGAGAACAATG",10,180.88,10.07,-0.77,0.07,2.58,1.06,0,">1 nonsynonymous","V52A N151I",2
"lib2","SARS-CoV-2","TAACATGATACAATTA",6,0,NA,NA,NA,NA,NA,NA,"stop","F62S T85* Y93R L162S",4
"lib2","SARS-CoV-2","TAACATGCATGAGTAT",4,45.1,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44M P82T I138V F156C",4
"lib2","SARS-CoV-2","TAACATGGCAAACCAA",20,2.27,NA,NA,NA,NA,NA,NA,"stop","S29Q V37* F44Y F160S",4
"lib2","SARS-CoV-2","TAACATGGCGGTAATA",1,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101F Q144L F160H V173T G196T",5
"lib2","SARS-CoV-2","TAACATGGTCCGATCC",10,6.39,NA,NA,NA,NA,NA,NA,"stop","G51R N118* V153E",3
"lib2","SARS-CoV-2","TAACATGGTGATCATT",2,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12C S129Y V181I",3
"lib2","SARS-CoV-2","TAACATGTCCTAAATT",3,37.41,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D90K D112F P177F",3
"lib2","SARS-CoV-2","TAACATGTCTCACGAG",11,60.18,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N1G F12H K94L",3
"lib2","SARS-CoV-2","TAACATGTGCCTGAAT",4,51.72,10.18,-0.66,0.05,2.97,1.02,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","TAACATGTTGCTGACA",4,73.82,10.89,0.05,0.04,2.93,1.06,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TAACATTAACTTCTGA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","S45I G83L F160*",3
"lib2","SARS-CoV-2","TAACATTATAGTGAGA",3,0.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TAACATTCACCGGCAT",11,6.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P A42W I72R E76P E141W E154R T170F G174Y",8
"lib2","SARS-CoV-2","TAACATTCCTTTCCAG",1,17.69,6.88,-3.96,0.39,1.5,1.09,0.05,">1 nonsynonymous","K48L Y93T N151L",3
"lib2","SARS-CoV-2","TAACATTGACGGTTAA",5,200.38,10.57,-0.27,0.02,2.86,1.06,0,">1 nonsynonymous","D90S Y123K H189I",3
"lib2","SARS-CoV-2","TAACATTGAGCCCCCA",7,37.01,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","R124E",1
"lib2","SARS-CoV-2","TAACATTGAGGATCAT",4,71.9,10.84,0,0.07,2.83,1.07,0,"1 nonsynonymous","R16D",1
"lib2","SARS-CoV-2","TAACATTGGACCAATC",1,15.39,11.1,0.26,0.07,2.97,1.01,0,">1 nonsynonymous","E154R S200L",2
"lib2","SARS-CoV-2","TAACATTGTCCAAATG",2,47.64,10.67,-0.17,0.04,2.96,1.02,0,">1 nonsynonymous","N4S D59A D90N",3
"lib2","SARS-CoV-2","TAACATTGTGCATCGA",2,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114T K199Y T201S",3
"lib2","SARS-CoV-2","TAACATTTAAAGAGAT",4,69.93,9.82,-1.01,0.08,2.58,1.07,0,">1 nonsynonymous","A22Q A33N K114L",3
"lib2","SARS-CoV-2","TAACATTTATACTTCA",10,96.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Q144L P161Q T170G",3
"lib2","SARS-CoV-2","TAACATTTCAATGACC",2,0,NA,NA,NA,NA,NA,NA,"stop","V71* P82* E141V S147A A190D",5
"lib2","SARS-CoV-2","TAACATTTCACCGAAT",7,66.22,9.53,-1.31,0.05,3,1.03,0,">1 nonsynonymous","T85S Y119S P149R T201N",4
"lib2","SARS-CoV-2","TAACATTTCAGAAAGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F N40R S139V V173M",4
"lib2","SARS-CoV-2","TAACATTTCGCTTTAA",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S G51L L95P P161L",4
"lib2","SARS-CoV-2","TAACCAAAAAACCGAC",10,171.54,10.79,-0.05,0.05,2.93,1.09,0,">1 nonsynonymous","N120E N130I",2
"lib2","SARS-CoV-2","TAACCAAACAATGAGG",9,64.19,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","G9L Y121H R127L Q168K",4
"lib2","SARS-CoV-2","TAACCAAACATTACGC",2,17.35,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3V D34V R124H",3
"lib2","SARS-CoV-2","TAACCAAAGGAAAAAC",10,2.3,NA,NA,NA,NA,NA,NA,"stop","W23M F99G I104M V173K T201*",5
"lib2","SARS-CoV-2","TAACCAAATAAACCAC",1,2.35,NA,NA,NA,NA,NA,NA,"stop","F44C T55* N110T",3
"lib2","SARS-CoV-2","TAACCAAATAAACTTT",2,34.31,10.03,-0.81,0.09,2.88,1.06,0,">1 nonsynonymous","K87E V173Q",2
"lib2","SARS-CoV-2","TAACCAAATGTAATGC",5,71.62,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25P T55D K114P",3
"lib2","SARS-CoV-2","TAACCAAATTTTATAG",3,11.74,6,-4.84,2,1.5,1.09,0.05,">1 nonsynonymous","A67I L95G Y119F G146N C195R",5
"lib2","SARS-CoV-2","TAACCAACAAGTATCA",5,125.29,10.31,-0.53,0.03,2.91,1,0,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","TAACCAACCTGGCGTA",2,101.69,6,-4.84,2,1.5,1.21,0.02,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","TAACCAAGAATTTGAA",3,72.82,10.74,-0.1,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACCAAGATTTAGGT",6,159.86,10.82,-0.02,0.05,2.93,1.07,0,">1 nonsynonymous","T148S F160W",2
"lib2","SARS-CoV-2","TAACCAAGCGAACACA",5,69.2,6,-4.84,2,2.4,1.19,0.02,">1 nonsynonymous","W23T Q176M",2
"lib2","SARS-CoV-2","TAACCAAGCGCTGAAT",5,71.01,9.96,-0.88,0.04,2.94,1.07,0,">1 nonsynonymous","L60I F156S",2
"lib2","SARS-CoV-2","TAACCAAGGTCTACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6Y K48S T55V Y66C D68*",5
"lib2","SARS-CoV-2","TAACCAAGGTTCAAAC",1,43.59,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L95P C102L",2
"lib2","SARS-CoV-2","TAACCAATAAACTGAA",2,36.77,7.81,-3.03,0.16,1.68,1.14,0.01,">1 nonsynonymous","V37L T140I Y175L",3
"lib2","SARS-CoV-2","TAACCAATACAATGTT",5,17.24,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C61V G101L Y143M",3
"lib2","SARS-CoV-2","TAACCAATACTCGGTT",1,20.27,9.71,-1.12,0.29,1.53,1.09,0.04,">1 nonsynonymous","W106F E135V T148R",3
"lib2","SARS-CoV-2","TAACCAATATACATGA",7,227.71,9.27,-1.57,0.04,2.94,1.06,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TAACCACACCCTTGTG",3,2.17,NA,NA,NA,NA,NA,NA,"stop","L5T W23* P96H",3
"lib2","SARS-CoV-2","TAACCACACTCGATTC",7,126.53,10.85,0.02,0.05,2.9,1.11,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TAACCACAGCAGGTCT",1,13.19,6.28,-4.56,1.03,1.5,1.22,0.06,">1 nonsynonymous","P96L N120S P149A",3
"lib2","SARS-CoV-2","TAACCACAGGCACCTA",8,18.88,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C49R Y165D",2
"lib2","SARS-CoV-2","TAACCACAGTCCCTTA",1,5.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41H S45T N58A D59Y G86I D97A A105K G152N F167K K199L",10
"lib2","SARS-CoV-2","TAACCACCACTCCTTA",5,16.68,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y91M W106H P133M",3
"lib2","SARS-CoV-2","TAACCACCGATAACCC",10,54.08,9.33,-1.51,0.12,2.1,1.09,0.01,">1 nonsynonymous","A14K S53P N110D R127G",4
"lib2","SARS-CoV-2","TAACCACCGATGCCGA",3,70.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Q79A Y91T T100I P177Y",4
"lib2","SARS-CoV-2","TAACCACCTCATTTTT",1,2.22,NA,NA,NA,NA,NA,NA,"stop","Y35T P54V G83* I88H Q168V",5
"lib2","SARS-CoV-2","TAACCACGTTTATCTA",4,0.44,NA,NA,NA,NA,NA,NA,"stop","T3L A42* V115M N120Q P149S",5
"lib2","SARS-CoV-2","TAACCACTAAAAAAAA",2,6.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L W106H G155R S184G",4
"lib2","SARS-CoV-2","TAACCAGCAATAAACG",5,65.99,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","F12R F99Y L122E P149L",4
"lib2","SARS-CoV-2","TAACCAGCCCAAATAT",1,44.31,10.62,-0.21,0.06,2.88,1.12,0,">1 nonsynonymous","R78H P96T L122K",3
"lib2","SARS-CoV-2","TAACCATAAAAATAAT",10,69.63,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","E10P P82D A105S G152V",4
"lib2","SARS-CoV-2","TAACCATAACTACTAC",6,64.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6I K94D S129G Y178P",4
"lib2","SARS-CoV-2","TAACCATAAGTACTTT",8,97.82,6,-4.84,0.68,1.5,1.12,0,"1 nonsynonymous","N92V",1
"lib2","SARS-CoV-2","TAACCATAATCTGTCA",1,10.18,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C6S G146V",2
"lib2","SARS-CoV-2","TAACCATAATGGATGA",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37Q",1
"lib2","SARS-CoV-2","TAACCATAGAAAAGGA",10,360.03,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2F N24A V37L Y123V Q176R H189R",6
"lib2","SARS-CoV-2","TAACCATAGCATATAT",1,9.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F R73W N107S L131W",4
"lib2","SARS-CoV-2","TAACCATAGTTATTAA",5,26.74,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9T I80K G86V",3
"lib2","SARS-CoV-2","TAACCATATCAACAGT",2,9.76,6,-4.84,2,3,1.04,0,">1 nonsynonymous","G86F G152S C158W",3
"lib2","SARS-CoV-2","TAACCATCCCAAAATG",8,52.2,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S36R F44Y D90P F99R T140L",5
"lib2","SARS-CoV-2","TAACCATCTTTCCAGC",3,29.59,9.58,-1.26,0.12,2.11,1.09,0.01,">1 nonsynonymous","T3S V11A L60A",3
"lib2","SARS-CoV-2","TAACCATGCCTGTACA",8,120.04,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","G9F L60I Y93T L122E Y143F",5
"lib2","SARS-CoV-2","TAACCATGGTCCACTA",9,57.7,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y119M P149G Y165T T201L",4
"lib2","SARS-CoV-2","TAACCATGTAGGCCTT",4,96.12,8.68,-2.16,0.22,1.5,1.1,0.02,">1 nonsynonymous","V32K E135G P149H G155V",4
"lib2","SARS-CoV-2","TAACCATTCCGCATCA",4,2.34,NA,NA,NA,NA,NA,NA,"stop","V52I A89K S113T R127* E135R",5
"lib2","SARS-CoV-2","TAACCCAAAGTTCCGA",2,17.62,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","N64L G146E G166L G174D T201L",5
"lib2","SARS-CoV-2","TAACCCAACTGCCCTT",4,49.42,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","K48R N58E I88D",3
"lib2","SARS-CoV-2","TAACCCAAGAGTTTGA",4,33.09,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","E10W V103M K128N",3
"lib2","SARS-CoV-2","TAACCCAAGTAATGCG",1,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44P V65R P82R Y121S I142M G155A",6
"lib2","SARS-CoV-2","TAACCCAATGCCGCAA",3,31.41,10.85,0.01,0.05,3,1.03,0,">1 nonsynonymous","Y66T F160A",2
"lib2","SARS-CoV-2","TAACCCACACATCTAA",4,0.3,NA,NA,NA,NA,NA,NA,"stop","R25V V37* G116Y",3
"lib2","SARS-CoV-2","TAACCCACACCTACTA",1,1.02,NA,NA,NA,NA,NA,NA,"stop","N1* C49T F62R T201Q",4
"lib2","SARS-CoV-2","TAACCCACCTATCTTA",3,1.87,NA,NA,NA,NA,NA,NA,"stop","N58W A89*",2
"lib2","SARS-CoV-2","TAACCCAGATGACCCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62S D68R",2
"lib2","SARS-CoV-2","TAACCCAGGTTTACAT",2,41.15,6,-4.84,2,3,1.18,0,">1 nonsynonymous","T63S P177I",2
"lib2","SARS-CoV-2","TAACCCATCGGTATAT",2,49.26,9.72,-1.12,0.09,2.64,1.04,0,">1 nonsynonymous","F12L A18S G116L",3
"lib2","SARS-CoV-2","TAACCCATTAACCAAC",5,53.16,6,-4.84,1.44,1.5,1.2,0.02,">1 nonsynonymous","V37P N92F",2
"lib2","SARS-CoV-2","TAACCCCAAACCATAA",3,68.09,10.63,-0.2,0.04,2.9,1.1,0,">1 nonsynonymous","G116D S147T",2
"lib2","SARS-CoV-2","TAACCCCAAGGGATAG",5,0.07,NA,NA,NA,NA,NA,NA,"stop","F44D T140H G146* N151P",4
"lib2","SARS-CoV-2","TAACCCCGAAAATATT",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101Q R124Y S129G Q168I P191R",5
"lib2","SARS-CoV-2","TAACCCCTCACACTAG",6,110.07,8.47,-2.36,0.14,1.67,1.06,0.01,">1 nonsynonymous","T55M D97F G155W V173G",4
"lib2","SARS-CoV-2","TAACCCCTGCTTCCAG",4,22.95,9.21,-1.62,0.23,1.74,1.06,0.02,">1 nonsynonymous","A14E A105M P149Q",3
"lib2","SARS-CoV-2","TAACCCCTTCGAGACT",10,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L D90N A190V",3
"lib2","SARS-CoV-2","TAACCCCTTTAGCACA",5,58.89,10.71,-0.13,0.05,2.94,1.09,0,"1 nonsynonymous","N4H",1
"lib2","SARS-CoV-2","TAACCCGAAAACCGTA",9,54.98,10.07,-0.77,0.08,2.49,1.07,0,">1 nonsynonymous","G9L N13L",2
"lib2","SARS-CoV-2","TAACCCGAAACCGTAA",3,87.39,10.68,-0.16,0.06,2.84,1.12,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","TAACCCGAATCAAAAT",1,26.72,10.68,-0.16,0.06,2.93,1,0,"1 nonsynonymous","V52Y",1
"lib2","SARS-CoV-2","TAACCCGACAAATTAA",5,16.84,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S53R D59F R136L G146A",4
"lib2","SARS-CoV-2","TAACCCGACGCTGGTT",2,13.3,10.89,0.06,0.13,2.76,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACCCGCAAAAAACA",2,80.63,9.81,-1.02,0.08,2.28,1.02,0,">1 nonsynonymous","E10A R73K R136I",3
"lib2","SARS-CoV-2","TAACCCGCCTTAAAAG",2,9.77,10.7,-0.13,0.11,2.82,1.21,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAACCCGCGCCGCGAT",3,47.23,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6S T63F V103L Y119S K128P V153P E186N",7
"lib2","SARS-CoV-2","TAACCCGCTTCAATTA",1,15.19,7.98,-2.86,0.34,1.74,1.07,0.05,">1 nonsynonymous","P7I K114P T140L",3
"lib2","SARS-CoV-2","TAACCCGGAAAATCAT",2,16.73,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F99V Q168C V181G",3
"lib2","SARS-CoV-2","TAACCCGGCACCACGA",3,16.98,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","I88R Y119V",2
"lib2","SARS-CoV-2","TAACCCGTTTGGATAT",1,10,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S43F I80D D98W E141Y T201W",5
"lib2","SARS-CoV-2","TAACCCTAATTCTGAA",4,12.28,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","R25I K114Y K132S",3
"lib2","SARS-CoV-2","TAACCCTATGCTGACG",3,18.67,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","A42G F62D P96I T170N",4
"lib2","SARS-CoV-2","TAACCCTATTTGAGAC",1,21.5,6.13,-4.7,1.35,1.5,1.25,0.05,">1 nonsynonymous","A14I K94Q P191F",3
"lib2","SARS-CoV-2","TAACCCTCAAATAATT",5,52.98,7.45,-3.39,0.3,1.5,1.21,0.03,">1 nonsynonymous","N107Y T201M",2
"lib2","SARS-CoV-2","TAACCCTCTAAAAGAA",4,31.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N58H Y66N L162W",3
"lib2","SARS-CoV-2","TAACCCTGAATAAACC",1,28.17,10.81,-0.02,0.09,2.89,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACCCTTTGTAATGT",8,11.29,8.85,-1.99,0.27,1.56,1.11,0.05,">1 nonsynonymous","N13C T63V V115S Q176W L183R",5
"lib2","SARS-CoV-2","TAACCGAAGAACTGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5C G146* G152N",3
"lib2","SARS-CoV-2","TAACCGAGGAGTGATT",11,247.68,10.34,-0.5,0.03,2.85,1.06,0,">1 nonsynonymous","T15L P149L",2
"lib2","SARS-CoV-2","TAACCGAGGGACCTAC",4,21.75,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V77S N157S A190V",3
"lib2","SARS-CoV-2","TAACCGAGTTGGCCTT",1,136.22,10.09,-0.74,0.04,2.94,1.03,0,"1 nonsynonymous","C6H",1
"lib2","SARS-CoV-2","TAACCGATCCAACAAT",1,6.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M E141W",2
"lib2","SARS-CoV-2","TAACCGATGGTCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V T100I D137L",3
"lib2","SARS-CoV-2","TAACCGATTGCATTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F L131R P169V",3
"lib2","SARS-CoV-2","TAACCGCACCTATCGG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib2","SARS-CoV-2","TAACCGCAGACCCCCA",1,10.87,NA,NA,NA,NA,NA,0.14,"wildtype","",0
"lib2","SARS-CoV-2","TAACCGCCAACTGTAT",1,27.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Q G116L L162D",3
"lib2","SARS-CoV-2","TAACCGCTAGAGCGAT",4,16.81,8.56,-2.27,0.11,3,1.12,0,">1 nonsynonymous","Y119P G174L",2
"lib2","SARS-CoV-2","TAACCGCTATGTCCAC",2,5.4,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C6S A42P N107K P149T L183G",5
"lib2","SARS-CoV-2","TAACCGCTGAAGACGG",4,14.19,8.11,-2.72,0.26,1.53,1,0.03,">1 nonsynonymous","D90Y A105S A145Y",3
"lib2","SARS-CoV-2","TAACCGGATATCTTAT",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89Y I104K",2
"lib2","SARS-CoV-2","TAACCGGCAGATCCTG",9,46.71,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V20T Y93C I142H",3
"lib2","SARS-CoV-2","TAACCGGTAGTAGGAA",12,18.58,NA,NA,NA,NA,NA,NA,"stop","T55N P96* G146W",3
"lib2","SARS-CoV-2","TAACCGGTGACCACGC",5,52.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A42G P54L N92K N107K",4
"lib2","SARS-CoV-2","TAACCGTAAATATGTG",4,25.97,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y119H V181F",2
"lib2","SARS-CoV-2","TAACCGTAATTAACGA",1,29.08,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S43W P82Q K87N",3
"lib2","SARS-CoV-2","TAACCGTAGGGTATAC",4,56.64,8.54,-2.29,0.24,1.68,1.08,0.02,">1 nonsynonymous","K56A Y91L N107R K128L I138M",5
"lib2","SARS-CoV-2","TAACCGTATATTAAAA",6,116.85,10.03,-0.8,0.07,2.54,1.07,0,">1 nonsynonymous","R27L T46C A105S",3
"lib2","SARS-CoV-2","TAACCGTCCACCTCCA",2,45.37,10.48,-0.35,0.06,2.83,1.14,0,">1 nonsynonymous","G9T L60K A192D",3
"lib2","SARS-CoV-2","TAACCGTGCACACACA",8,60.44,9.4,-1.44,0.08,1.8,1.1,0,">1 nonsynonymous","D90V S129L V153N",3
"lib2","SARS-CoV-2","TAACCTAAACATTTAA",2,46.7,8.16,-2.68,0.13,2.07,1,0.01,">1 nonsynonymous","R16C R73Y",2
"lib2","SARS-CoV-2","TAACCTAAACCAAAAG",16,170.97,10.68,-0.15,0.04,2.94,1.06,0,"1 nonsynonymous","K114E",1
"lib2","SARS-CoV-2","TAACCTAAGAAGTAGG",7,123.13,10.69,-0.15,0.05,2.92,1.04,0,">1 nonsynonymous","P54W P149F",2
"lib2","SARS-CoV-2","TAACCTAATTGCACTT",7,174.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S113C G116E G146K",3
"lib2","SARS-CoV-2","TAACCTACAGCTACTA",9,126.68,10.77,-0.06,0.04,2.94,1.07,0,">1 nonsynonymous","G51H I104F",2
"lib2","SARS-CoV-2","TAACCTACGGCCATTA",5,44.06,9.96,-0.87,0.07,2.62,1.03,0,">1 nonsynonymous","F8V C61Y N151H",3
"lib2","SARS-CoV-2","TAACCTACTCCGTCCA",10,90.26,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S29A P82W",2
"lib2","SARS-CoV-2","TAACCTAGTAGTACAT",3,31.5,6.95,-3.88,0.24,1.5,1.11,0.02,">1 nonsynonymous","N120C Y175V",2
"lib2","SARS-CoV-2","TAACCTATAAATGTCA",1,6.14,7.48,-3.36,0.21,2.52,1.13,0.01,">1 nonsynonymous","T100M N107D S139A",3
"lib2","SARS-CoV-2","TAACCTATCGTTTGTA",1,1.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104R",1
"lib2","SARS-CoV-2","TAACCTATGTAGAAAC",4,41.96,6.12,-4.71,0.49,1.5,1.11,0.01,">1 nonsynonymous","L5K I28L N64C T85K G101D G166L",6
"lib2","SARS-CoV-2","TAACCTATTCAGACGT",7,86.5,10.56,-0.28,0.05,2.96,1.06,0,">1 nonsynonymous","N40S E186S",2
"lib2","SARS-CoV-2","TAACCTCACGCATTAT",2,4.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S G86D E141G P149Y F160A V173P",6
"lib2","SARS-CoV-2","TAACCTCAGATGAACA",3,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93K E135L V173Y P177L",4
"lib2","SARS-CoV-2","TAACCTCAGTAGCTTT",3,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L I104A",2
"lib2","SARS-CoV-2","TAACCTCGATAGAATG",10,64.7,8.16,-2.68,0.2,1.5,1.18,0.01,">1 nonsynonymous","L5F D34R D97F G152T",4
"lib2","SARS-CoV-2","TAACCTCGTATCAAAC",1,13.27,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","G86C Y91Q",2
"lib2","SARS-CoV-2","TAACCTCTCACACTTA",2,74.65,10.69,-0.15,0.02,2.95,1.06,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","TAACCTCTCACTTTAA",2,105.06,6.04,-4.8,0.82,1.5,1.16,0.01,">1 nonsynonymous","F12M R16S N64T Y178D T201W",5
"lib2","SARS-CoV-2","TAACCTCTGAGATTAA",3,10.36,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1K N24M P82Q D112K",4
"lib2","SARS-CoV-2","TAACCTGAAACTAATT",18,185.03,10.23,-0.6,0.02,2.95,1.02,0,">1 nonsynonymous","P7W P149Q",2
"lib2","SARS-CoV-2","TAACCTGACGAAAAAA",5,61.56,10.6,-0.23,0.04,2.94,1.04,0,">1 nonsynonymous","V32M T85G",2
"lib2","SARS-CoV-2","TAACCTGAGAGGGAAA",3,18.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y39G C61H V77E",3
"lib2","SARS-CoV-2","TAACCTGAGCTCCTAC",2,17.74,9.72,-1.12,0.15,2.11,1.14,0.01,">1 nonsynonymous","A14Y C61V E141S",3
"lib2","SARS-CoV-2","TAACCTGAGCTTAATT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","V103* Q176K",2
"lib2","SARS-CoV-2","TAACCTGAGGCATTCA",5,102.59,10.11,-0.72,0.06,2.71,1,0,"1 nonsynonymous","F17V",1
"lib2","SARS-CoV-2","TAACCTGATAAAAATA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","L38* E76R T140Y V173L",4
"lib2","SARS-CoV-2","TAACCTGCGAGTATCG",3,0.92,NA,NA,NA,NA,NA,NA,"stop","F8L A81K P82T P197S T201*",5
"lib2","SARS-CoV-2","TAACCTGCGCTAAAGC",1,20.87,10.09,-0.74,0.15,2.72,1.11,0.01,">1 nonsynonymous","D90H N151F",2
"lib2","SARS-CoV-2","TAACCTGGGCCGAAAA",12,65.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D68P G117I F156S Q176T",4
"lib2","SARS-CoV-2","TAACCTGTTACAGAGG",3,10.07,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","W23I N157L",2
"lib2","SARS-CoV-2","TAACCTGTTTAAAGAA",2,11.28,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y35G F70M I138F T201S",4
"lib2","SARS-CoV-2","TAACCTGTTTCACCGC",5,69.08,9.37,-1.47,0.06,2.96,1.08,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","TAACCTTACCAAAAGA",1,10.44,10.8,-0.03,0.08,2.9,1.11,0,"1 nonsynonymous","Q144S",1
"lib2","SARS-CoV-2","TAACCTTATGCGCATA",2,4.12,NA,NA,NA,NA,NA,NA,"stop","C49W Q84* N120Y",3
"lib2","SARS-CoV-2","TAACCTTATGTCAACT",2,15.11,10.77,-0.07,0.08,2.73,1.26,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACCTTATTTGTGAC",6,28.51,8.31,-2.52,0.35,1.5,1.03,0.06,">1 nonsynonymous","S41G L95F",2
"lib2","SARS-CoV-2","TAACCTTCACGGCTTT",9,252.78,10.81,-0.03,0.04,2.87,1.12,0,"1 nonsynonymous","K48Q",1
"lib2","SARS-CoV-2","TAACCTTGAGAAGCAC",1,7.66,10.77,-0.06,0.13,2.94,1,0.01,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","TAACCTTGATAAAATA",1,8.01,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","F8M I28M V37S V103S",4
"lib2","SARS-CoV-2","TAACCTTGCCCCAAAT",2,18.24,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","S19I",1
"lib2","SARS-CoV-2","TAACCTTGGAATTTCT",2,26.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L95T K132I E141F",3
"lib2","SARS-CoV-2","TAACCTTGTAATGTCT",15,316.31,10.7,-0.14,0.03,2.96,1.05,0,"1 nonsynonymous","T15Q",1
"lib2","SARS-CoV-2","TAACCTTGTTTATTAA",6,76.23,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G9D D90Q P96Q F99T",4
"lib2","SARS-CoV-2","TAACCTTTAAAGGATT",10,154.71,10.88,0.05,0.05,2.92,1.08,0,">1 nonsynonymous","L60Y V115I",2
"lib2","SARS-CoV-2","TAACGAAAAGTGACTG",3,23.44,7.78,-3.05,0.31,1.75,1.19,0.03,">1 nonsynonymous","E10S Y35L G86S Y119R",4
"lib2","SARS-CoV-2","TAACGAAAATAAGATA",11,53.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C49F G83F S113M C158F",4
"lib2","SARS-CoV-2","TAACGAAAATATGGCT",1,9.49,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6V C49R K94V W106M",4
"lib2","SARS-CoV-2","TAACGAAACAAGCAAA",1,38.85,10.99,0.16,0.14,2.79,1.08,0,">1 nonsynonymous","S43Q T55S",2
"lib2","SARS-CoV-2","TAACGAAATAACTATG",7,34.65,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y50T G83L R127S K128M",4
"lib2","SARS-CoV-2","TAACGAACATTCTAAC",10,147.09,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L60G R124L",2
"lib2","SARS-CoV-2","TAACGAACCAAAGCAT",6,59.59,8.37,-2.46,0.21,1.5,1.01,0.02,">1 nonsynonymous","F17C I138R",2
"lib2","SARS-CoV-2","TAACGAACGTACTAGT",4,22.83,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V11S F47S A89N S129V Y165D",5
"lib2","SARS-CoV-2","TAACGAACTCCAAAGA",10,82.93,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G9Q A18R I142Y Y159C Y165V",5
"lib2","SARS-CoV-2","TAACGAACTTATAGAT",1,1.95,NA,NA,NA,NA,NA,NA,"stop","F17W D90S T148* P177*",4
"lib2","SARS-CoV-2","TAACGAAGATAAAAAT",1,37.57,10.69,-0.15,0.07,2.82,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGAAGTCTCGTAA",2,62.97,6,-4.84,0.87,1.65,1.17,0.01,">1 nonsynonymous","G9I N64G P149A Y175I",4
"lib2","SARS-CoV-2","TAACGAATAAAACCAT",9,151.02,10.77,-0.07,0.05,2.96,1.06,0,">1 nonsynonymous","L5S G152S",2
"lib2","SARS-CoV-2","TAACGAATGTCAGCAT",9,121.79,10.81,-0.03,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGAATTTGATACT",4,53.18,10.64,-0.2,0.05,2.92,1.06,0,">1 nonsynonymous","S45D G51N S184L",3
"lib2","SARS-CoV-2","TAACGACAAAACTATA",3,21.62,6.05,-4.78,0.81,3,1.24,0.01,">1 nonsynonymous","F12S T63M P82V W106D",4
"lib2","SARS-CoV-2","TAACGACACATCTATT",7,186.09,10.8,-0.03,0.05,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACGACACTATAAAT",1,14.2,6,-4.84,2,3,1.04,0,">1 nonsynonymous","Y121G T148S G166D",3
"lib2","SARS-CoV-2","TAACGACAGTGGGGTG",8,92.45,10.73,-0.1,0.03,3,1.03,0,">1 nonsynonymous","T63K Y123M",2
"lib2","SARS-CoV-2","TAACGACCACATTCTG",5,53.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89L I142Q R179Y",3
"lib2","SARS-CoV-2","TAACGACCCAATAGGG",5,39.5,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27L R78C N92R V103I",4
"lib2","SARS-CoV-2","TAACGACCCAATATCT",3,14.69,6,-4.84,0.94,1.5,1.08,0.01,">1 nonsynonymous","G86N Y165K R179P",3
"lib2","SARS-CoV-2","TAACGACCCACCAGCG",4,63.84,10.14,-0.69,0.06,2.88,1,0,">1 nonsynonymous","C31G T201G",2
"lib2","SARS-CoV-2","TAACGACCGATTTTGA",7,45.57,6,-4.84,1.22,1.5,1.14,0.01,">1 nonsynonymous","F8L G86K I142F",3
"lib2","SARS-CoV-2","TAACGACGCTCACTAA",8,98.04,9.01,-1.82,0.17,1.5,1.05,0.01,">1 nonsynonymous","K128R S139I L183I A190F",4
"lib2","SARS-CoV-2","TAACGACTAAGATATC",3,106.2,10.31,-0.53,0.04,2.83,1.06,0,">1 nonsynonymous","A81V T85K",2
"lib2","SARS-CoV-2","TAACGACTAGTGATAT",6,17.2,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99V T140P",2
"lib2","SARS-CoV-2","TAACGACTCCCCAATT",6,51.34,10.78,-0.05,0.05,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGACTGCAACGCC",4,50.62,9.79,-1.04,0.05,1.99,1.05,0,"1 nonsynonymous","C49I",1
"lib2","SARS-CoV-2","TAACGAGAAACAAGTC",1,20.41,9.66,-1.17,0.14,2.16,1.15,0.01,">1 nonsynonymous","Y123T F160P",2
"lib2","SARS-CoV-2","TAACGAGAATAGAGAC",3,54.63,7.42,-3.41,0.26,1.5,1.13,0.02,">1 nonsynonymous","S36T W106M Q144L",3
"lib2","SARS-CoV-2","TAACGAGCAATTTCAA",2,7.48,8.95,-1.89,0.24,1.82,1.26,0.03,">1 nonsynonymous","Y91T D97V",2
"lib2","SARS-CoV-2","TAACGAGGAAACACTA",3,104.01,6,-4.84,2,1.79,1.13,0,">1 nonsynonymous","P7K P177F",2
"lib2","SARS-CoV-2","TAACGAGGCTAAATAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S A89L Y119S",3
"lib2","SARS-CoV-2","TAACGAGTCATCGTAA",3,111.71,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G166S G172W",2
"lib2","SARS-CoV-2","TAACGATAAATAATTT",5,38.37,6.28,-4.55,0.38,2.19,1.15,0.01,">1 nonsynonymous","P7V G117T G174Y",3
"lib2","SARS-CoV-2","TAACGATAAGACGGAC",3,20.38,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","G74V Q176R",2
"lib2","SARS-CoV-2","TAACGATATGACGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* K198I",2
"lib2","SARS-CoV-2","TAACGATCTCTATACG",3,5.13,8.41,-2.42,0.47,2,1.31,0.02,">1 nonsynonymous","I28C Y39S G155T Q168I L188A",5
"lib2","SARS-CoV-2","TAACGATTAGGTTACT",1,112.43,10.13,-0.71,0.06,2.8,1.02,0,"1 nonsynonymous","A105C",1
"lib2","SARS-CoV-2","TAACGATTATATTCGT",1,16.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88Q V173N",2
"lib2","SARS-CoV-2","TAACGATTCAAGCACA",5,64.78,10.62,-0.22,0.04,2.98,1.02,0,">1 nonsynonymous","T15L L122G",2
"lib2","SARS-CoV-2","TAACGATTGAAAATCG",9,43.77,7.18,-3.65,0.5,1.5,1.08,0.06,">1 nonsynonymous","A81K F185S",2
"lib2","SARS-CoV-2","TAACGATTGGACCACG",3,0.38,NA,NA,NA,NA,NA,NA,"stop","A33R G51Q F62*",3
"lib2","SARS-CoV-2","TAACGATTTCACACAT",5,87.79,10.14,-0.69,0.07,2.67,1.14,0,">1 nonsynonymous","A33N K56S N120S",3
"lib2","SARS-CoV-2","TAACGCAAACCCGTTA",5,71.91,9.6,-1.23,0.06,2.5,1.04,0,">1 nonsynonymous","T15R G155F",2
"lib2","SARS-CoV-2","TAACGCAAACGATACA",1,14.22,6,-4.84,2,1.5,1.39,0.08,">1 nonsynonymous","C6D S53T P96T K114L K132F",5
"lib2","SARS-CoV-2","TAACGCAACAAAGGAA",3,0.28,NA,NA,NA,NA,NA,NA,"stop","E10C S41F D98F C102H Y165*",5
"lib2","SARS-CoV-2","TAACGCAACAATAACT",3,11.73,6,-4.84,1.84,1.5,1.05,0.01,">1 nonsynonymous","L57T F70I T85G K94S T201R",5
"lib2","SARS-CoV-2","TAACGCAACACGCGAA",13,277.95,10.58,-0.26,0.02,2.95,1.06,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","TAACGCACCAACACCG",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90M L125N D137G Q144L F167L V182L",6
"lib2","SARS-CoV-2","TAACGCACTAGATAGA",8,77.65,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A42T F167S",2
"lib2","SARS-CoV-2","TAACGCATCCTCAATG",4,22.77,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T170S Y175K T201Q",3
"lib2","SARS-CoV-2","TAACGCATCTTTAATA",9,60.69,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","I28L D59I A105R P177G",4
"lib2","SARS-CoV-2","TAACGCCAATTCCTGA",2,26.66,10.64,-0.19,0.08,2.84,1.17,0,">1 nonsynonymous","L60W L187S",2
"lib2","SARS-CoV-2","TAACGCCAATTCTGTT",2,68.35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P54H Y66R G172K S200F",4
"lib2","SARS-CoV-2","TAACGCCACACGCACG",9,104.14,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A105P Q144A P149E P169T",4
"lib2","SARS-CoV-2","TAACGCCAGCTGAGTG",1,9.58,10.73,-0.1,0.12,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGCCAGTGATGGA",2,66.15,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6Q K94E E141T",3
"lib2","SARS-CoV-2","TAACGCCAGTGGGTCT",6,35.96,10.65,-0.18,0.07,2.89,1.08,0,">1 nonsynonymous","D90A A190S",2
"lib2","SARS-CoV-2","TAACGCCGTCATGAAA",12,236.66,9.9,-0.94,0.07,2.14,1.04,0,">1 nonsynonymous","V32Q L60P D97T N120G",4
"lib2","SARS-CoV-2","TAACGCCTAAAGGCAC",7,96.39,10.89,0.05,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGCCTACATTAAA",8,131.92,10.4,-0.44,0.03,2.91,1.03,0,"1 nonsynonymous","Q84Y",1
"lib2","SARS-CoV-2","TAACGCCTACCCTAAC",1,0.69,NA,NA,NA,NA,NA,NA,"stop","A14P S43F I72* K198T",4
"lib2","SARS-CoV-2","TAACGCCTTTGGGCCG",10,297.47,8.51,-2.32,0.07,2.29,1.09,0,">1 nonsynonymous","K87A Q176K",2
"lib2","SARS-CoV-2","TAACGCGGTTCCTCAC",4,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31S L60R K87D S184D",4
"lib2","SARS-CoV-2","TAACGCTAACAATCAA",6,31.72,6.39,-4.44,0.43,1.5,1.09,0.01,">1 nonsynonymous","Y91D R124T G146L",3
"lib2","SARS-CoV-2","TAACGCTAACCGGGGG",5,121.26,10.75,-0.08,0.06,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGCTAACTCGCTA",4,61.63,7.52,-3.32,0.14,1.64,1.16,0.01,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","TAACGCTATAGCCATC",5,184.29,8.31,-2.53,0.13,2.74,1.06,0.01,">1 nonsynonymous","N118S Q163D",2
"lib2","SARS-CoV-2","TAACGCTCAATAAACG",6,170.49,10.89,0.05,0.04,2.92,1.09,0,"1 nonsynonymous","T100F",1
"lib2","SARS-CoV-2","TAACGCTGCCATACTA",1,3.64,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAACGCTGTTGGCTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19K C61S L125P T140N C195T",5
"lib2","SARS-CoV-2","TAACGCTTCACTTCAG",8,138.42,10.77,-0.07,0.04,2.93,1.06,0,">1 nonsynonymous","I2H P54A D97Y",3
"lib2","SARS-CoV-2","TAACGCTTTTTTGGTA",3,22.34,6.03,-4.81,0.78,1.5,1.12,0.01,">1 nonsynonymous","F44Q W106V G116Y V181G",4
"lib2","SARS-CoV-2","TAACGGAAAGCAAGAA",1,20.44,10.44,-0.39,0.14,2.82,1.18,0.01,">1 nonsynonymous","S45Q T100Y G116T",3
"lib2","SARS-CoV-2","TAACGGAACGAACTGG",8,68.93,6,-4.84,2,3,1.21,0,">1 nonsynonymous","W23Y L60D I88M G174R",4
"lib2","SARS-CoV-2","TAACGGAACTTTCATC",18,91.38,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C49R P96L T140Q",3
"lib2","SARS-CoV-2","TAACGGAAGAAACAAC",6,121.98,10.66,-0.17,0.03,2.95,1.06,0,"1 nonsynonymous","R78L",1
"lib2","SARS-CoV-2","TAACGGAAGATCTAAA",2,41.35,10.79,-0.04,0.05,2.96,1.07,0,">1 nonsynonymous","S43T N171A",2
"lib2","SARS-CoV-2","TAACGGAATAAGATAA",8,82.91,10.88,0.04,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGGACAAATAGAA",5,102.51,9.7,-1.13,0.04,2.96,1.03,0,">1 nonsynonymous","I2N G83D S129K G174E",4
"lib2","SARS-CoV-2","TAACGGAGAAAGTAAA",4,168.82,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17I V52I P177M",3
"lib2","SARS-CoV-2","TAACGGAGAATTTAAT",7,25.44,10.8,-0.03,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGGAGGGCCCTTA",9,79.35,9.09,-1.74,0.12,1.56,1.11,0.01,">1 nonsynonymous","L38K F44L",2
"lib2","SARS-CoV-2","TAACGGATAATGTGAC",3,5.01,NA,NA,NA,NA,NA,NA,"stop","P7V K87N P96*",3
"lib2","SARS-CoV-2","TAACGGCAACAAGCTT",7,40.73,9.66,-1.17,0.13,2.04,1.1,0.01,"1 nonsynonymous","F12C",1
"lib2","SARS-CoV-2","TAACGGCAATCATCGC",1,0.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3D N40F G155D",3
"lib2","SARS-CoV-2","TAACGGCCCTGTACTT",14,120.26,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12R K26Q D90T L122F N151P",5
"lib2","SARS-CoV-2","TAACGGCGTAACATTT",3,25.45,10.34,-0.5,0.11,2.7,1.16,0.01,"1 nonsynonymous","Y66A",1
"lib2","SARS-CoV-2","TAACGGCTGAGTAGAT",9,101.81,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y21F S29E Q84K V153M Y165K",5
"lib2","SARS-CoV-2","TAACGGCTGTACATTA",3,207.57,7.97,-2.87,0.1,1.56,1.12,0,"1 nonsynonymous","Q176F",1
"lib2","SARS-CoV-2","TAACGGGATACCGTAT",5,99.19,10.82,-0.01,0.05,2.91,1.09,0,"1 nonsynonymous","V65I",1
"lib2","SARS-CoV-2","TAACGGGCTAACGCTA",1,19.88,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","N107L F126L G174E",3
"lib2","SARS-CoV-2","TAACGGTAATAACATA",4,24.06,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","W23I D59M S69L",3
"lib2","SARS-CoV-2","TAACGGTAATCAAATC",3,33.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6A S45K K87N W106F G155S",5
"lib2","SARS-CoV-2","TAACGGTATAGTAAAA",8,3.68,NA,NA,NA,NA,NA,NA,"stop","N13S F167*",2
"lib2","SARS-CoV-2","TAACGGTCGCATTTCT",2,62.63,10.75,-0.08,0.05,2.98,1.03,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","TAACGGTGAACCCTAC",2,23.57,9.13,-1.71,0.13,2.59,1.18,0.01,">1 nonsynonymous","A42N P161T",2
"lib2","SARS-CoV-2","TAACGGTGAATAAACG",7,103.44,10.64,-0.19,0.05,2.87,1.05,0,">1 nonsynonymous","F126L T201Q",2
"lib2","SARS-CoV-2","TAACGGTTTTGTACAC",10,109.42,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8G V37F F99E E135T",4
"lib2","SARS-CoV-2","TAACGTAAAACTATTA",12,26.92,6.27,-4.57,0.9,1.5,1.15,0.05,">1 nonsynonymous","A22V D68P R136T",3
"lib2","SARS-CoV-2","TAACGTAACATGAAAA",9,160.19,10.67,-0.17,0.02,2.97,1.05,0,"1 nonsynonymous","P169T",1
"lib2","SARS-CoV-2","TAACGTAACCTGTGGC",7,99.45,10.14,-0.69,0.05,2.54,1.03,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","TAACGTAATATACAAC",9,103.94,9.83,-1.01,0.11,2.39,1.03,0,">1 nonsynonymous","S19G T140D",2
"lib2","SARS-CoV-2","TAACGTACAGCACTTA",1,32.93,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","V11D T100G S113T N120T F134V",5
"lib2","SARS-CoV-2","TAACGTACAGTCTTAA",5,35.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V N58A G83V A89Y",4
"lib2","SARS-CoV-2","TAACGTACATATTCGC",4,27.36,8.9,-1.94,0.22,1.87,1.13,0.02,">1 nonsynonymous","S41Y I104G G174T",3
"lib2","SARS-CoV-2","TAACGTAGCATATGAC",6,28.22,6.22,-4.62,0.93,1.5,1.18,0.03,">1 nonsynonymous","N1S T3K P96I T100V Y119M L131A",6
"lib2","SARS-CoV-2","TAACGTAGTGTGACAC",9,32.72,6.54,-4.3,0.38,2.1,1.21,0.01,">1 nonsynonymous","D137G F160S E186N",3
"lib2","SARS-CoV-2","TAACGTATACCCGTTA",8,202.34,10.68,-0.16,0.06,2.76,1.13,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TAACGTATTCAACCCT",1,51.26,10.56,-0.28,0.04,2.99,1,0,"1 nonsynonymous","V52H",1
"lib2","SARS-CoV-2","TAACGTCACCAGGAAA",3,24.82,9.91,-0.93,0.13,2.56,1.01,0.01,">1 nonsynonymous","K26D G83S S129N T201F",4
"lib2","SARS-CoV-2","TAACGTCCAACGAAAT",5,48.12,8.8,-2.03,0.19,2.13,1.23,0.01,">1 nonsynonymous","K87P V115Y R136T",3
"lib2","SARS-CoV-2","TAACGTCCTCAACACT",1,10.82,10.67,-0.16,0.07,2.88,1.14,0,">1 nonsynonymous","I28L D97L V115W",3
"lib2","SARS-CoV-2","TAACGTCGAAAACAAC",8,5.48,NA,NA,NA,NA,NA,NA,"stop","L38V G51I W106F G117* S129I",5
"lib2","SARS-CoV-2","TAACGTCTCTCACGCT",2,10.45,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33D Y93K",2
"lib2","SARS-CoV-2","TAACGTCTTTATCGAA",2,477.48,10.83,-0.01,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACGTGAACACTCCG",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20A C61M",2
"lib2","SARS-CoV-2","TAACGTGACAATTGGA",4,18.68,10.78,-0.05,0.07,2.96,1.05,0,"1 nonsynonymous","K26L",1
"lib2","SARS-CoV-2","TAACGTGACATGATTA",26,42.28,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","C6Y C49T W106P",3
"lib2","SARS-CoV-2","TAACGTGACCGAAACC",6,23.47,8.99,-1.85,0.37,1.5,1,0.05,">1 nonsynonymous","V11G T85K Y165F",3
"lib2","SARS-CoV-2","TAACGTGCATAGAGTG",5,33.69,8.4,-2.44,0.16,1.73,1.12,0.01,">1 nonsynonymous","T15C A81M F156L",3
"lib2","SARS-CoV-2","TAACGTGCTAAAACAA",1,10.84,7.24,-3.59,0.25,1.5,1.13,0.01,">1 nonsynonymous","D97S C150A E154L",3
"lib2","SARS-CoV-2","TAACGTGCTGGCAAGC",1,6.01,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","TAACGTTAATTCAGAT",1,32.51,7.93,-2.91,0.17,1.73,1.12,0.01,">1 nonsynonymous","L5R D75S P149S Y175L",4
"lib2","SARS-CoV-2","TAACGTTAGGACACTT",4,47.19,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y91T V180T",2
"lib2","SARS-CoV-2","TAACGTTAGTAAAGCT",9,143,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G152D F167Q",2
"lib2","SARS-CoV-2","TAACGTTCAACTCCTA",1,63.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40P L162P",2
"lib2","SARS-CoV-2","TAACGTTCAGATAGGT",1,21.39,7.45,-3.38,0.34,1.6,1.07,0.02,">1 nonsynonymous","N13G G101W I138S P149L",4
"lib2","SARS-CoV-2","TAACGTTGTCAACGTA",1,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36G S41T V77E R78L N92E",5
"lib2","SARS-CoV-2","TAACGTTGTGGATCTA",7,70.12,9.76,-1.08,0.06,2.3,1.1,0,">1 nonsynonymous","N13R T85C F134G",3
"lib2","SARS-CoV-2","TAACGTTTACACCTTT",1,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N151Q V181S",2
"lib2","SARS-CoV-2","TAACGTTTTACGGCAG",5,123.85,8.65,-2.19,0.08,2.45,1.05,0,">1 nonsynonymous","N107A S113G",2
"lib2","SARS-CoV-2","TAACGTTTTCAAGATG",1,23.67,10.48,-0.36,0.1,2.79,1.2,0.01,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","TAACTAAAATCAAAAA",1,25.93,9.7,-1.13,0.13,2.01,1.1,0.01,"1 nonsynonymous","L162R",1
"lib2","SARS-CoV-2","TAACTAAAATGCAGTC",12,86.65,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S36Q I138S L183N A192E",4
"lib2","SARS-CoV-2","TAACTAAACCATACCG",3,2.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6L",1
"lib2","SARS-CoV-2","TAACTAAACCGAAATG",5,36.35,6,-4.84,1.03,1.5,1.21,0.01,">1 nonsynonymous","K48S F99L R127K",3
"lib2","SARS-CoV-2","TAACTAAAGAGACTCA",4,27.86,10.21,-0.62,0.06,3,1,0,">1 nonsynonymous","S41Y N118Q T201W",3
"lib2","SARS-CoV-2","TAACTAAAGAGTGAAG",5,41.92,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W106P Y119T Y143S G152T",4
"lib2","SARS-CoV-2","TAACTAAAGTAAATTG",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W T63I D68T D90V N110Q G174R",6
"lib2","SARS-CoV-2","TAACTAAATAATGAAA",1,11.91,9.44,-1.4,0.11,1.94,1,0.01,">1 nonsynonymous","G51T Y178T",2
"lib2","SARS-CoV-2","TAACTAACAATCCCGT",4,51.2,10.13,-0.7,0.13,2.38,1.1,0.01,">1 nonsynonymous","N1P S41Q C102I",3
"lib2","SARS-CoV-2","TAACTAACACTCTCAC",2,32.64,9.2,-1.64,0.07,1.91,1.04,0,">1 nonsynonymous","C6Y A81K",2
"lib2","SARS-CoV-2","TAACTAACCAAGGTGC",9,191.69,10.89,0.05,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTAACCGCGTAGT",11,34.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y Y50F D112I",3
"lib2","SARS-CoV-2","TAACTAACTGAACCGC",8,51.29,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","G83H K94C D137L",3
"lib2","SARS-CoV-2","TAACTAACTTCTAGAA",11,89.08,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51T R78P R124P R136W C150F V153A",6
"lib2","SARS-CoV-2","TAACTAAGAACATAAA",13,169.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N A81N Y123M",3
"lib2","SARS-CoV-2","TAACTAAGAGGGAAAG",2,15.82,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","V71T S184P",2
"lib2","SARS-CoV-2","TAACTAAGAGGGCAAA",4,132.26,10.71,-0.13,0.04,2.99,1.04,0,">1 nonsynonymous","F8L N58S",2
"lib2","SARS-CoV-2","TAACTAAGATCCACTA",4,57.82,8.36,-2.47,0.08,2.33,1.07,0,">1 nonsynonymous","A22V S45N K87L N120S G166A",5
"lib2","SARS-CoV-2","TAACTAAGATTCCCGG",10,91.2,10.71,-0.13,0.04,2.9,1.11,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","TAACTAAGCTCATTAG",7,68.09,8.42,-2.41,0.14,2.83,1.05,0.01,">1 nonsynonymous","A42S Q168K",2
"lib2","SARS-CoV-2","TAACTAATAGATTCGT",10,22.11,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","D90R C102E K114I",3
"lib2","SARS-CoV-2","TAACTAATCCCACCAA",4,70.79,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G155L P177V",2
"lib2","SARS-CoV-2","TAACTAATCTAGCAAA",9,103.02,9.4,-1.44,0.06,2.92,1.08,0,"1 nonsynonymous","Y119I",1
"lib2","SARS-CoV-2","TAACTAATGCTTAAGG",11,7.08,NA,NA,NA,NA,NA,NA,"stop","D98Y A105*",2
"lib2","SARS-CoV-2","TAACTAATTTCCCAGG",5,58.82,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G146K Y165S",2
"lib2","SARS-CoV-2","TAACTAATTTTCTGAC",5,11.61,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A14S N58A S139V V182F",4
"lib2","SARS-CoV-2","TAACTACAAAAGCAAT",4,29.98,10.46,-0.37,0.07,2.87,1.14,0,">1 nonsynonymous","S29F S41M",2
"lib2","SARS-CoV-2","TAACTACCAATCCTAT",3,37.83,6.19,-4.64,0.59,1.5,1.11,0.03,">1 nonsynonymous","W23R K48N I88K",3
"lib2","SARS-CoV-2","TAACTACCACTAACAA",4,88.88,10.82,-0.01,0.03,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTACCAGGTAAGT",3,0,NA,NA,NA,NA,NA,NA,"stop","L95P C195*",2
"lib2","SARS-CoV-2","TAACTACCCAACTTAT",5,18.98,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P54I T100P G146W",3
"lib2","SARS-CoV-2","TAACTACCCTATGCAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P F126N L183P",3
"lib2","SARS-CoV-2","TAACTACCTGGCAAAC",5,19.01,6,-4.84,1.47,1.5,1.2,0.03,">1 nonsynonymous","L122K V180G",2
"lib2","SARS-CoV-2","TAACTACGAACGCCAA",2,41.49,9.28,-1.56,0.06,3,1.06,0,">1 nonsynonymous","G117R S200A",2
"lib2","SARS-CoV-2","TAACTACGTACTGAAA",2,1.99,NA,NA,NA,NA,NA,NA,"stop","S45C D97A R127* E141R",4
"lib2","SARS-CoV-2","TAACTACGTGAAAAAT",3,38.63,6,-4.84,1.59,1.5,1.17,0.01,">1 nonsynonymous","Y39P C49V P169L",3
"lib2","SARS-CoV-2","TAACTACTGCACGTGT",7,77.88,10.21,-0.63,0.05,2.82,1.07,0,">1 nonsynonymous","I2L F167Y",2
"lib2","SARS-CoV-2","TAACTACTGGTTCTGA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N92S I104E Y119F T140L T148M Y159*",6
"lib2","SARS-CoV-2","TAACTACTGTACCACA",7,89.88,10.9,0.07,0.06,2.96,1.06,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","TAACTAGAAAAGGGAC",4,5.14,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","A67D",1
"lib2","SARS-CoV-2","TAACTAGAAAATACTG",1,8.96,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","A14S Y50D V77M K87W N120L S139I",6
"lib2","SARS-CoV-2","TAACTAGAATAGCTCT",11,167.02,10.31,-0.53,0.03,2.86,1.03,0,">1 nonsynonymous","N1Y T46I V153C",3
"lib2","SARS-CoV-2","TAACTAGCACAGTCAA",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120D Y143E",2
"lib2","SARS-CoV-2","TAACTAGCCACTAAGA",1,16.4,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D34A T100R Y119R C150G",4
"lib2","SARS-CoV-2","TAACTAGCCTAAAATG",6,18.24,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","F8G A33I A81S D90Y T100H V115W",6
"lib2","SARS-CoV-2","TAACTAGCGTCTATAA",3,22.49,10.26,-0.57,0.09,2.27,1,0,">1 nonsynonymous","A14P T100C",2
"lib2","SARS-CoV-2","TAACTAGGCAGAGCAC",1,0.57,NA,NA,NA,NA,NA,NA,"stop","Q84H K114T G146L G172* V180S",5
"lib2","SARS-CoV-2","TAACTAGGCTAAAAAG",2,6.68,10.74,-0.09,0.1,2.9,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTAGGTCAAACTC",4,41.95,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F8Y Y93S D112K",3
"lib2","SARS-CoV-2","TAACTAGGTGGTCAAA",7,74.38,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C49T A67Y C102V",3
"lib2","SARS-CoV-2","TAACTAGTAAACGAAA",2,94.31,8.8,-2.03,0.08,1.91,1.07,0,">1 nonsynonymous","N64P D112L",2
"lib2","SARS-CoV-2","TAACTATAAACATTAC",4,53.7,9.95,-0.88,0.11,2.13,1.03,0,">1 nonsynonymous","N1W F47L P54S K199L",4
"lib2","SARS-CoV-2","TAACTATAAACGTAAA",19,251.2,10.08,-0.76,0.03,2.94,1.03,0,"1 nonsynonymous","I142A",1
"lib2","SARS-CoV-2","TAACTATAATCAGGTA",11,80.17,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","G86E C158R",2
"lib2","SARS-CoV-2","TAACTATACTAACCTA",6,134.05,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1Y V32A V71M D90F",4
"lib2","SARS-CoV-2","TAACTATACTGATATC",16,172.3,10.14,-0.7,0.04,2.91,1,0,">1 nonsynonymous","C6Y T201K",2
"lib2","SARS-CoV-2","TAACTATAGAGTACAT",4,121.06,9.9,-0.93,0.04,2.97,1.03,0,">1 nonsynonymous","F134R G166A",2
"lib2","SARS-CoV-2","TAACTATAGTGTATAT",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93K D112I N118A",3
"lib2","SARS-CoV-2","TAACTATATCAAAAAG",3,11.98,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G51T P82I D97L L122M E186D",5
"lib2","SARS-CoV-2","TAACTATATCGCGGCG",3,5.94,9.82,-1.02,0.12,2.81,1.23,0,">1 nonsynonymous","K87C T140M Y175F",3
"lib2","SARS-CoV-2","TAACTATCTCAATACT",15,197.6,10.85,0.01,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTATGAGAGTAAG",2,17.02,6.22,-4.62,2,1.5,1.21,0.03,">1 nonsynonymous","G172R T201A",2
"lib2","SARS-CoV-2","TAACTATGCAATTACA",2,21.76,9.81,-1.02,0.13,2.92,1.06,0.01,"1 nonsynonymous","Y121A",1
"lib2","SARS-CoV-2","TAACTATGCATATAAT",7,79.24,10.27,-0.57,0.08,2.74,1.01,0,">1 nonsynonymous","N1H E10I T55A",3
"lib2","SARS-CoV-2","TAACTATGGTTGTTTA",7,2.65,NA,NA,NA,NA,NA,NA,"stop","N4P L38* Y143L C150R F167L K198M",6
"lib2","SARS-CoV-2","TAACTATTACAATCCA",11,126.3,10.39,-0.45,0.03,2.94,1.04,0,">1 nonsynonymous","G9T T100A",2
"lib2","SARS-CoV-2","TAACTATTACTATCAG",1,21.55,9.96,-0.87,0.12,2.66,1.08,0.01,"1 nonsynonymous","S19M",1
"lib2","SARS-CoV-2","TAACTATTCTAGATGA",7,31.83,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F70I A89N D98L Y119E",4
"lib2","SARS-CoV-2","TAACTATTGAAAGTAC",1,1.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N109M",1
"lib2","SARS-CoV-2","TAACTATTGTATCATA",8,108.59,10.85,0.01,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACTATTTCGTTAAA",7,41.28,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C49F Y93L E141M T170S",4
"lib2","SARS-CoV-2","TAACTCAAAATTATCA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","F8Y T201*",2
"lib2","SARS-CoV-2","TAACTCAAAGAGAGCC",11,161.56,9.45,-1.38,0.08,2.07,1.08,0,">1 nonsynonymous","L60S I88L",2
"lib2","SARS-CoV-2","TAACTCAACAATTAGA",7,29.65,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4R W23V G51A",3
"lib2","SARS-CoV-2","TAACTCAACACCACCT",2,6.58,6,-4.84,1.58,3,1.04,0.01,">1 nonsynonymous","D34Y A81T N107V T140G G174R",5
"lib2","SARS-CoV-2","TAACTCAAGCTCCTCC",1,7.23,6,-4.84,2,1.5,1.21,0.07,">1 nonsynonymous","A14C F99C P149R",3
"lib2","SARS-CoV-2","TAACTCAAGGCAAACA",2,23.64,6,-4.84,2,3,1.18,0,">1 nonsynonymous","I2K G101D E154R S164N",4
"lib2","SARS-CoV-2","TAACTCACAAAGGATA",3,367.78,10.5,-0.33,0.02,2.92,1.04,0,"1 nonsynonymous","E135T",1
"lib2","SARS-CoV-2","TAACTCACCACAGCGG",1,0,NA,NA,NA,NA,NA,NA,"stop","L60S G146*",2
"lib2","SARS-CoV-2","TAACTCACCAGTTCAC",6,149.86,10.75,-0.09,0.04,2.92,1.08,0,">1 nonsynonymous","L5V N151S T201R",3
"lib2","SARS-CoV-2","TAACTCACTTCAATAA",10,35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36C N118H V182A",3
"lib2","SARS-CoV-2","TAACTCAGAGGAGTAA",4,23.81,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N64S V71R R124P G155H",4
"lib2","SARS-CoV-2","TAACTCAGCTGATGCA",4,41.07,10.61,-0.22,0.05,2.85,1.06,0,">1 nonsynonymous","A33T N130T V173A",3
"lib2","SARS-CoV-2","TAACTCATATATAAAC",2,37.76,6.35,-4.49,0.38,1.5,1.08,0.01,">1 nonsynonymous","G9M T15L Y93R I138A V173Y T201G",6
"lib2","SARS-CoV-2","TAACTCATGCAATCCT",2,51.11,10.95,0.12,0.08,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTCCAACAGTGCT",5,0.1,NA,NA,NA,NA,NA,NA,"stop","N13S C61I P82* N118Y S129T V153*",6
"lib2","SARS-CoV-2","TAACTCCAATGAGTTG",8,64.47,10.42,-0.42,0.05,2.95,1.05,0,">1 nonsynonymous","I2S S36C",2
"lib2","SARS-CoV-2","TAACTCCATACCACAG",17,62.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S43K D68R Q168L T201V",4
"lib2","SARS-CoV-2","TAACTCCGACCTCAAT",9,94.77,9.89,-0.95,0.08,2.22,1.04,0,">1 nonsynonymous","E10T P133T",2
"lib2","SARS-CoV-2","TAACTCCGACTCTACG",4,36.63,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V37F I72K Y93I D97E S184K",5
"lib2","SARS-CoV-2","TAACTCCTGTGTAAAC",7,70.75,10.71,-0.12,0.04,2.98,1.02,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","TAACTCGAAAGGATTT",3,0.07,NA,NA,NA,NA,NA,NA,"stop","F17H F47* A81V G86F Y123P P149C G166V T201V",8
"lib2","SARS-CoV-2","TAACTCGAGCGGTGAA",3,45.66,10.8,-0.03,0.05,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTCGCTCCACAAG",2,2.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20P",1
"lib2","SARS-CoV-2","TAACTCGCTGATGACG",8,49.52,9.45,-1.38,0.11,2.11,1.06,0.01,"1 nonsynonymous","C102F",1
"lib2","SARS-CoV-2","TAACTCGGCATGAATA",6,128.2,10.85,0.01,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTCGTCCTAAAGG",5,21.62,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","T63K R124T T140K",3
"lib2","SARS-CoV-2","TAACTCGTGACCGAAA",13,374.6,9.08,-1.75,0.05,1.96,1.12,0,">1 nonsynonymous","L5R E10Y A145S Y178W",4
"lib2","SARS-CoV-2","TAACTCGTTCCATTTT",2,66.53,9.03,-1.8,0.07,1.93,1.05,0,">1 nonsynonymous","S19Q K48C K56D",3
"lib2","SARS-CoV-2","TAACTCTCAACTGACC",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28R L60P K114W S164P",4
"lib2","SARS-CoV-2","TAACTCTCACTAACTA",15,63.22,9.26,-1.58,0.09,1.53,1.14,0,">1 nonsynonymous","S53Y A81Y",2
"lib2","SARS-CoV-2","TAACTCTGAGGACACA",5,66.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8W C31N C61K Y91L F99T K198S",6
"lib2","SARS-CoV-2","TAACTCTGCGTATTAC",5,66.36,8.03,-2.8,0.16,1.78,1.07,0.01,">1 nonsynonymous","Y121E F156T",2
"lib2","SARS-CoV-2","TAACTCTTCAGCCTGA",3,7.23,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","N58A F70S G117R I138V F167A",5
"lib2","SARS-CoV-2","TAACTCTTGAGTCAAA",4,107.54,10.76,-0.08,0.11,2.73,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTGAAACTGATAT",1,38.55,10.9,0.06,0.22,2.55,1.15,0.01,">1 nonsynonymous","A18D P197A",2
"lib2","SARS-CoV-2","TAACTGAAATAAATAA",13,114.34,7.69,-3.14,0.2,1.5,1.16,0.01,">1 nonsynonymous","W23S Q168G",2
"lib2","SARS-CoV-2","TAACTGAAGGACTTCG",2,8.16,9.89,-0.95,0.12,2.89,1.18,0.01,">1 nonsynonymous","S36V Y50W G174M",3
"lib2","SARS-CoV-2","TAACTGAAGTGCACTT",1,31.51,10.37,-0.47,0.05,3,1.01,0,">1 nonsynonymous","S41V D97A",2
"lib2","SARS-CoV-2","TAACTGAATATGGATC",16,4.58,NA,NA,NA,NA,NA,NA,"stop","C6T F99* K128C I138F",4
"lib2","SARS-CoV-2","TAACTGAATGGCCAAC",6,59.39,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V20R T63K",2
"lib2","SARS-CoV-2","TAACTGAATTAAGGTA",4,94.41,6.37,-4.47,0.46,1.5,1.21,0.02,"1 nonsynonymous","P177T",1
"lib2","SARS-CoV-2","TAACTGACAAAACCAC",6,139.93,10.69,-0.15,0.03,2.94,1.06,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","TAACTGACACCGGCGG",6,4.7,NA,NA,NA,NA,NA,NA,"stop","N1E F160*",2
"lib2","SARS-CoV-2","TAACTGACCTCTCATA",5,29.17,10.07,-0.77,0.09,2.07,1,0,">1 nonsynonymous","A18S A81F",2
"lib2","SARS-CoV-2","TAACTGACCTTGTATT",4,64.83,10.85,0.01,0.05,2.92,1.07,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","TAACTGACTAACTAAT",2,7.35,6,-4.84,2,1.5,1.03,0,"1 nonsynonymous","F99G",1
"lib2","SARS-CoV-2","TAACTGACTCCAAAAT",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T A42H G51R G86T D97G E141V",6
"lib2","SARS-CoV-2","TAACTGAGCCAAGGGG",6,131.88,10.03,-0.81,0.09,2.38,1.05,0,">1 nonsynonymous","D34K N110P",2
"lib2","SARS-CoV-2","TAACTGATGAATTTTC",6,44.83,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","C6R G86C D98K E141R",4
"lib2","SARS-CoV-2","TAACTGATTAACGCAT",4,5.1,9.7,-1.13,0.21,3,1.01,0.02,">1 nonsynonymous","G9F C61M Q84I T201M",4
"lib2","SARS-CoV-2","TAACTGCAAGGCGACA",7,68.4,10.21,-0.62,0.05,2.8,1.14,0,">1 nonsynonymous","C61W G83L",2
"lib2","SARS-CoV-2","TAACTGCAGAAAAAAC",7,4.04,NA,NA,NA,NA,NA,NA,"stop","A33R T46K N64G N110*",4
"lib2","SARS-CoV-2","TAACTGCCAGGCAGCA",2,8.31,7.12,-3.72,1.79,3,1.33,0.06,">1 nonsynonymous","R73A V77W",2
"lib2","SARS-CoV-2","TAACTGCCATTTTACT",3,73.77,10.75,-0.09,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTGCCGGAGGCAT",3,0.84,NA,NA,NA,NA,NA,NA,"stop","F12R Y121*",2
"lib2","SARS-CoV-2","TAACTGCGCGGAATTC",11,35.87,6,-4.84,0.98,1.5,1.09,0.01,">1 nonsynonymous","T46R F70S K94L G101V V153W F185A",6
"lib2","SARS-CoV-2","TAACTGCTGCATCACC",5,53,10.57,-0.26,0.06,2.91,1.09,0,">1 nonsynonymous","N40P C61Y",2
"lib2","SARS-CoV-2","TAACTGCTTTATACAT",5,0.79,NA,NA,NA,NA,NA,NA,"stop","N64R K114H I142H T201*",4
"lib2","SARS-CoV-2","TAACTGGAACATTGGC",9,118.26,10.38,-0.46,0.04,2.85,1.12,0,">1 nonsynonymous","S29K V37S L131V E141H",4
"lib2","SARS-CoV-2","TAACTGGACTTTATGT",2,8.77,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","G86K G155S L183G K198S",4
"lib2","SARS-CoV-2","TAACTGGAGAATAGTT",2,23.72,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T63G F167T",2
"lib2","SARS-CoV-2","TAACTGGATGAAGTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","Q84* E154* Q176Y",3
"lib2","SARS-CoV-2","TAACTGGCCTATGGCC",10,90.47,10.79,-0.05,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTGGGGACACTAA",7,78.15,9.85,-0.99,0.09,2.47,1.07,0,">1 nonsynonymous","S19M Y91F",2
"lib2","SARS-CoV-2","TAACTGGGTTAACAAG",6,51.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L95R N130L",2
"lib2","SARS-CoV-2","TAACTGGTCCTGTGTT",1,42.63,10.85,0.01,0.07,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTGTAGATTATGC",1,21.18,6.42,-4.41,0.14,1.64,1.04,0,">1 nonsynonymous","C61L A89R L131S",3
"lib2","SARS-CoV-2","TAACTGTATAGAAGAT",8,23.19,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","G9R G51F K56L A89N Y143V",5
"lib2","SARS-CoV-2","TAACTGTCTTTGTCTA",4,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20K W106N",2
"lib2","SARS-CoV-2","TAACTGTGCCCCGATT",3,37.34,8.55,-2.28,0.42,1.5,1,0.06,">1 nonsynonymous","S43W L57I P82I",3
"lib2","SARS-CoV-2","TAACTGTGTATTGAGA",7,142.06,10.8,-0.04,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAACTGTGTTAATACT",13,223.43,10.74,-0.09,0.03,2.89,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TAACTGTGTTTGACAG",2,100.29,10.77,-0.07,0.04,2.93,1.09,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TAACTTAAAGGCCAAA",3,109.24,8.52,-2.32,0.11,2.73,1.09,0,">1 nonsynonymous","C6S Y119T",2
"lib2","SARS-CoV-2","TAACTTAAATTCAACG",4,25.14,8.72,-2.12,0.18,1.7,1.1,0.02,">1 nonsynonymous","R27G D112E K199N",3
"lib2","SARS-CoV-2","TAACTTAACACTTTAT",4,37.12,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V20M F44R E154L G172P",4
"lib2","SARS-CoV-2","TAACTTAAGAGGAAAA",5,60,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L38F L122T G172W",3
"lib2","SARS-CoV-2","TAACTTAAGGGTGACA",1,10.52,10.33,-0.5,0.09,2.9,1.06,0,">1 nonsynonymous","D90A K114N",2
"lib2","SARS-CoV-2","TAACTTACCAATGCGT",1,33.3,10.01,-0.82,0.11,2.68,1.05,0.01,">1 nonsynonymous","N13Y C61V D97K",3
"lib2","SARS-CoV-2","TAACTTACTCACAGGC",5,6.98,NA,NA,NA,NA,NA,NA,"stop","D90S D98L S129I V153*",4
"lib2","SARS-CoV-2","TAACTTACTTGAAATT",4,110.45,10.14,-0.7,0.03,2.94,1.02,0,">1 nonsynonymous","C6A P191S",2
"lib2","SARS-CoV-2","TAACTTAGACTAATCT",5,25.14,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19V T55R V103P K199F",4
"lib2","SARS-CoV-2","TAACTTATAAAATCAG",10,102,9.46,-1.37,0.03,2.8,1.09,0,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","TAACTTATAAAGACAA",6,92.23,6,-4.84,1.69,1.5,1.15,0,">1 nonsynonymous","L57V D68R",2
"lib2","SARS-CoV-2","TAACTTATAAAGATCC",5,74.8,7.24,-3.59,0.2,1.78,1.12,0.01,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","TAACTTATAACCTCAA",5,85.48,10.81,-0.03,0.04,2.96,1.05,0,">1 nonsynonymous","V37M K114W",2
"lib2","SARS-CoV-2","TAACTTATACAAACCC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","L5V F62I R127E E135*",4
"lib2","SARS-CoV-2","TAACTTATGCCAAAAA",2,79.49,10.25,-0.58,0.02,2.88,1.06,0,">1 nonsynonymous","Y35V P96N L122Y",3
"lib2","SARS-CoV-2","TAACTTATGGGACATT",9,110.75,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","A14G S43V G166C Q176G",4
"lib2","SARS-CoV-2","TAACTTATTCTTGGAA",6,57.37,8.62,-2.21,0.08,2.48,1.08,0,">1 nonsynonymous","R136S Q168I",2
"lib2","SARS-CoV-2","TAACTTCCCACCTAAC",14,189.27,8.76,-2.08,0.04,2.05,1.07,0,">1 nonsynonymous","L5S K87V D137N P149T",4
"lib2","SARS-CoV-2","TAACTTCCTGATCACG",8,42.02,9.29,-1.55,0.38,1.5,1,0.06,">1 nonsynonymous","T15R W106K A145K C195I",4
"lib2","SARS-CoV-2","TAACTTCGATACCGGG",2,69.92,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","R16N I28F S164C P177Y",4
"lib2","SARS-CoV-2","TAACTTCTCACCACAA",3,44.87,9.76,-1.07,0.05,2.96,1.03,0,">1 nonsynonymous","P54R Y66S Y159H",3
"lib2","SARS-CoV-2","TAACTTGACTCATCAG",17,316.74,10.75,-0.08,0.04,2.94,1.08,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","TAACTTGAGTGGTGGA",2,6.79,10.73,-0.11,0.23,2.39,1.01,0.02,">1 nonsynonymous","A192H T201N",2
"lib2","SARS-CoV-2","TAACTTGATTGAAATA",2,6.72,6,-4.84,2,3,1.08,0,">1 nonsynonymous","E10L V52D E135R G174L",4
"lib2","SARS-CoV-2","TAACTTGCATTACTCA",1,8.41,10.25,-0.59,0.1,3,1.01,0,">1 nonsynonymous","A105S E141L",2
"lib2","SARS-CoV-2","TAACTTGGGCTTTAGC",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R S129G G146R F156Y",4
"lib2","SARS-CoV-2","TAACTTGTTGCTAAAC",6,45.83,10.35,-0.49,0.03,2.95,1.05,0,"1 nonsynonymous","S45P",1
"lib2","SARS-CoV-2","TAACTTTAACACCAAG",9,89.26,9.78,-1.06,0.06,2.41,1.01,0,">1 nonsynonymous","C6A A89S",2
"lib2","SARS-CoV-2","TAACTTTAGAACTAAA",7,88.67,10.22,-0.61,0.03,3,1.01,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","TAACTTTAGCGCAATC",9,116.14,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44W R78L C150S",3
"lib2","SARS-CoV-2","TAACTTTAGGTCAGAA",2,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S A42P T55N V77F F99S I142N F156K",7
"lib2","SARS-CoV-2","TAACTTTATTACCTCC",4,18.39,7.66,-3.17,0.29,1.5,1.07,0.02,">1 nonsynonymous","F12C Y123Q A145T",3
"lib2","SARS-CoV-2","TAACTTTCGATGTCTG",6,53.96,10.41,-0.43,0.06,2.77,1.04,0,">1 nonsynonymous","A22R S41N S45V",3
"lib2","SARS-CoV-2","TAACTTTGGTTCATTG",3,33.95,9.37,-1.47,0.07,2.49,1.08,0,">1 nonsynonymous","Y121R V153S",2
"lib2","SARS-CoV-2","TAACTTTTAACTTCTT",5,86.14,8.5,-2.34,0.1,2.77,1.13,0,">1 nonsynonymous","V37S A145S G146M",3
"lib2","SARS-CoV-2","TAACTTTTAAGTATCG",10,183.86,10.67,-0.16,0.04,2.93,1.05,0,">1 nonsynonymous","P7A V37A F160L",3
"lib2","SARS-CoV-2","TAACTTTTATCGTAAC",1,10.86,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S41C F47S T63L D112S Y119I Y165G T201Q",7
"lib2","SARS-CoV-2","TAAGAAAAACAACGGC",12,140.99,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L60T G116E F167K",3
"lib2","SARS-CoV-2","TAAGAAAAATAACATA",9,4.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49R",1
"lib2","SARS-CoV-2","TAAGAAAAATGTATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17K I28P G146*",3
"lib2","SARS-CoV-2","TAAGAAAACATCACAG",2,14.29,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F47G F62C I104T",3
"lib2","SARS-CoV-2","TAAGAAAACCCGCAAT",1,20.34,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","W106S R136S Q168P",3
"lib2","SARS-CoV-2","TAAGAAAAGATTAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N13D S29M R73W Q84H T85A K94*",6
"lib2","SARS-CoV-2","TAAGAAAATTTCGTCT",3,106.2,9.73,-1.11,0.06,2.34,1.01,0,">1 nonsynonymous","N13T K56V R78D A81E L122M",5
"lib2","SARS-CoV-2","TAAGAAACAAAAGACT",4,43.27,9.42,-1.42,0.07,2.72,1.02,0,">1 nonsynonymous","N107R K114E",2
"lib2","SARS-CoV-2","TAAGAAACAGGTATAT",6,2.82,NA,NA,NA,NA,NA,NA,"stop","A42T Y66* T148L",3
"lib2","SARS-CoV-2","TAAGAAACAGTATAAC",9,7.93,NA,NA,NA,NA,NA,NA,"stop","A33K F44C L57A K87T I142* F160S V173S",7
"lib2","SARS-CoV-2","TAAGAAACCTCCCCTT",4,2.76,NA,NA,NA,NA,NA,NA,"stop","F44V V103* Y119S D137L Y143Q",5
"lib2","SARS-CoV-2","TAAGAAACTTATAAAA",7,107.59,7.96,-2.88,0.14,1.75,1.15,0.01,">1 nonsynonymous","D90S S113Y",2
"lib2","SARS-CoV-2","TAAGAAACTTCTGACC",18,200.47,10.8,-0.04,0.04,2.92,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAGAAAGAACAGACG",2,8.51,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","W23L F62R F99V Y121S R127G",5
"lib2","SARS-CoV-2","TAAGAAAGAAGGGAAA",8,236.2,8.93,-1.91,0.06,2.88,1.12,0,">1 nonsynonymous","N4D T63C K87L Y119H",4
"lib2","SARS-CoV-2","TAAGAAAGACAAAGAA",11,192.32,10.08,-0.76,0.04,2.69,1.07,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","TAAGAAAGGAAGTGAA",4,39.05,6,-4.84,1.49,1.5,1.2,0.03,">1 nonsynonymous","G117N L131T I142F",3
"lib2","SARS-CoV-2","TAAGAAAGGCGAGTAC",3,18.49,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","Y91A Y123V P133E",3
"lib2","SARS-CoV-2","TAAGAAATAGAATTGT",1,82.49,11.11,0.27,0.05,2.98,1.03,0,">1 nonsynonymous","K56A Q163F",2
"lib2","SARS-CoV-2","TAAGAAATCCTAAATA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","T15* A67I A81T L122I S139F P149L",6
"lib2","SARS-CoV-2","TAAGAAATGCGAGGAA",5,8.42,NA,NA,NA,NA,NA,NA,"stop","P133* E154F",2
"lib2","SARS-CoV-2","TAAGAAATGCTTGTGC",12,332.56,10.84,0,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGAAATGGAACGAA",3,26.78,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","A18M Y50H N107P F167K",4
"lib2","SARS-CoV-2","TAAGAACAATAAGACG",2,24.71,10.74,-0.09,0.06,2.96,1.02,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TAAGAACACAAATAGG",6,1.11,NA,NA,NA,NA,NA,NA,"stop","N4M V103* K128S",3
"lib2","SARS-CoV-2","TAAGAACACAACCAAT",5,14.86,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","N4V Y35N V103F Y143L K198S",5
"lib2","SARS-CoV-2","TAAGAACACACGAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","F44* K87I",2
"lib2","SARS-CoV-2","TAAGAACAGACAACCT",4,62.25,10.57,-0.27,0.08,2.92,1.04,0,">1 nonsynonymous","V32E P54H",2
"lib2","SARS-CoV-2","TAAGAACAGACCCCTT",2,8.01,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAAGAACAGTATTACC",8,55.01,6.28,-4.55,0.58,1.5,1.15,0.02,">1 nonsynonymous","V20L S45F P177T",3
"lib2","SARS-CoV-2","TAAGAACAGTGAGATC",2,19.56,10.65,-0.19,0.07,2.97,1.05,0,">1 nonsynonymous","N30E F62P",2
"lib2","SARS-CoV-2","TAAGAACATTTTGGAA",4,253.57,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G116P F160N Y175I",3
"lib2","SARS-CoV-2","TAAGAACCAACCCTTA",1,0.72,NA,NA,NA,NA,NA,NA,"stop","L5F V37E K48E S113* D137T",5
"lib2","SARS-CoV-2","TAAGAACCAACTTTAC",6,5.43,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","L5R A42L K94D Y143R N157F P191H",6
"lib2","SARS-CoV-2","TAAGAACCATCGGGGG",7,58.56,7.34,-3.49,0.29,1.5,1.17,0.02,">1 nonsynonymous","N1C T63H K114R N120K K128I G146A N151W",7
"lib2","SARS-CoV-2","TAAGAACCCATTCCTC",9,81.76,10.15,-0.69,0.08,2.61,1.06,0,">1 nonsynonymous","E135M H189W",2
"lib2","SARS-CoV-2","TAAGAACGAATACGGT",14,35.78,6,-4.84,2,3,1.17,0,">1 nonsynonymous","K56G N64Y I88M S113L",4
"lib2","SARS-CoV-2","TAAGAACGACTGTTCC",5,59.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14T V20S T63F D97A L111R",5
"lib2","SARS-CoV-2","TAAGAACGATTTATAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87S G116F T170F",3
"lib2","SARS-CoV-2","TAAGAACGCATAATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y123K T201*",2
"lib2","SARS-CoV-2","TAAGAACGGAGGACAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56Q K87C T100V",3
"lib2","SARS-CoV-2","TAAGAACGGGTCATCA",11,260.25,10.36,-0.48,0.04,2.83,1.09,0,">1 nonsynonymous","T55N Q84Y",2
"lib2","SARS-CoV-2","TAAGAACTATATAGCC",3,54.74,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I2L A14Y K87G T100D Y143P Y178C",6
"lib2","SARS-CoV-2","TAAGAACTCTCCGTCT",3,7.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TAAGAACTTTTATAAA",4,39.41,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C61V A67I F99Y N118S Q176N",5
"lib2","SARS-CoV-2","TAAGAAGAATACTGCA",7,52.82,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","G51Q R127T R179T",3
"lib2","SARS-CoV-2","TAAGAAGACAAATGGC",4,32.81,6.23,-4.61,0.78,1.5,1.14,0.03,">1 nonsynonymous","F44D D59S S147V V181R",4
"lib2","SARS-CoV-2","TAAGAAGACCTAAAGG",5,2.27,NA,NA,NA,NA,NA,NA,"stop","N64S Y91*",2
"lib2","SARS-CoV-2","TAAGAAGATTAAACGC",4,39.44,6,-4.84,2,3,1.19,0,">1 nonsynonymous","C49M T85R R136Y V173D E186N",5
"lib2","SARS-CoV-2","TAAGAAGCAATTAGAA",17,71.82,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Y50H L60R K87L A105P E141G",5
"lib2","SARS-CoV-2","TAAGAAGGAGCAACAA",7,149.2,9.43,-1.4,0.03,2.96,1.06,0,">1 nonsynonymous","P7Q Y35L Q168V",3
"lib2","SARS-CoV-2","TAAGAAGGGCACAAAC",7,92.51,10.8,-0.04,0.05,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAGAAGTATAACATA",10,153.66,6,-4.84,2,2.55,1.19,0,">1 nonsynonymous","F12M L38S F134C G166N R179T",5
"lib2","SARS-CoV-2","TAAGAAGTCATTAGTA",11,55.22,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L95R V103R R127V Y175V",4
"lib2","SARS-CoV-2","TAAGAAGTCGTTCAAA",7,43.15,10.8,-0.04,0.04,2.95,1.05,0,"1 nonsynonymous","F134M",1
"lib2","SARS-CoV-2","TAAGAAGTGAACTAGG",1,13.81,7.67,-3.16,0.18,1.9,1.04,0.01,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","TAAGAATAAAAAGTAC",9,144.52,8.33,-2.5,0.08,1.75,1.11,0,">1 nonsynonymous","S29M T85M Y121C",3
"lib2","SARS-CoV-2","TAAGAATAAATGGCTG",17,8.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N40S K48R S129G",3
"lib2","SARS-CoV-2","TAAGAATAACACAGGC",3,13.79,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","C102G R179S",2
"lib2","SARS-CoV-2","TAAGAATAAGCAGACT",7,115.82,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T55C R127A P149Q Y175K",4
"lib2","SARS-CoV-2","TAAGAATACACGTTGG",10,171.17,9.96,-0.87,0.09,2.35,1,0,"1 nonsynonymous","A14F",1
"lib2","SARS-CoV-2","TAAGAATAGAAACTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","TAAGAATAGATTTGAG",1,21.13,6,-4.84,1.09,3,1.07,0,">1 nonsynonymous","F99D N107C S200P",3
"lib2","SARS-CoV-2","TAAGAATATACTGCTG",1,55.22,7.06,-3.78,0.23,1.5,1.22,0.01,">1 nonsynonymous","S36L V77G",2
"lib2","SARS-CoV-2","TAAGAATATTTAGTTT",3,11.85,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","D68P Y91L R136H",3
"lib2","SARS-CoV-2","TAAGAATGAAACCCCA",5,92.12,10.6,-0.23,0.05,2.88,1.02,0,">1 nonsynonymous","T46K S129F N171Y",3
"lib2","SARS-CoV-2","TAAGAATGGCGACCCA",3,26.35,10.61,-0.22,0.16,2.7,1.12,0.01,">1 nonsynonymous","Y39V N151D",2
"lib2","SARS-CoV-2","TAAGAATGTGTACACC",5,36.92,10.79,-0.05,0.05,2.89,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAGAATTAGCGAGTT",5,0,NA,NA,NA,NA,NA,NA,"stop","P96Y Q144D Y159*",3
"lib2","SARS-CoV-2","TAAGAATTTAAAACTA",7,120.38,9.65,-1.19,0.05,1.98,1.07,0,">1 nonsynonymous","E10Y L57V S147D",3
"lib2","SARS-CoV-2","TAAGAATTTAAGAAAT",2,26.42,10.69,-0.15,0.04,3,1.03,0,">1 nonsynonymous","K114H E141T",2
"lib2","SARS-CoV-2","TAAGACAAAAGATAAA",11,89.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22L R127I",2
"lib2","SARS-CoV-2","TAAGACAAAAGCTGTC",13,134.79,10.79,-0.05,0.03,2.99,1.04,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","TAAGACAAACAAATAG",1,78.27,10.19,-0.64,0.08,2.71,1.09,0,">1 nonsynonymous","N13S D90N",2
"lib2","SARS-CoV-2","TAAGACAAATCAAGTT",3,53.75,10.44,-0.39,0.03,2.97,1,0,">1 nonsynonymous","V52H T201M",2
"lib2","SARS-CoV-2","TAAGACAAATGCATTT",10,82.69,6.09,-4.75,0.47,1.5,1.16,0.01,">1 nonsynonymous","D75E K94L Y123F K128C",4
"lib2","SARS-CoV-2","TAAGACAACTTATAAG",1,7.65,10.72,-0.12,0.09,2.94,1.08,0,">1 nonsynonymous","L5G S43P",2
"lib2","SARS-CoV-2","TAAGACAATATCCAAA",6,79.47,10.67,-0.16,0.03,3,1,0,">1 nonsynonymous","F62M I138Q Q168R",3
"lib2","SARS-CoV-2","TAAGACACACGCGTAA",4,14.53,8.42,-2.41,0.28,1.54,1.14,0.03,">1 nonsynonymous","G9V A14S G83V Q168S",4
"lib2","SARS-CoV-2","TAAGACACACTCATTG",7,141.24,9.78,-1.06,0.04,2.77,1.07,0,">1 nonsynonymous","D34S K87S",2
"lib2","SARS-CoV-2","TAAGACACTCCATAAA",10,75.1,7.1,-3.74,0.28,1.51,1.2,0.02,">1 nonsynonymous","T3K Q144D Y165I",3
"lib2","SARS-CoV-2","TAAGACACTTGACAAG",5,0,NA,NA,NA,NA,NA,NA,"stop","I88A D112S L122G G166*",4
"lib2","SARS-CoV-2","TAAGACATAATTAAAC",1,32.06,10.4,-0.44,0.04,3,1.01,0,">1 nonsynonymous","G83H I138P T201N",3
"lib2","SARS-CoV-2","TAAGACATGTCCGTAA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib2","SARS-CoV-2","TAAGACATTATGCAGT",2,63.76,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A18G F99Y V103L I142H Q176H",5
"lib2","SARS-CoV-2","TAAGACATTGCAGTTG",1,11.66,10.78,-0.06,0.05,3,1.02,0,">1 nonsynonymous","T63D F160P S200A",3
"lib2","SARS-CoV-2","TAAGACCAAAGATCTT",1,24.51,6.04,-4.79,0.88,1.5,1.12,0.01,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","TAAGACCCAAAATAAG",9,2.52,NA,NA,NA,NA,NA,NA,"stop","N92V V103R Y121T K132*",4
"lib2","SARS-CoV-2","TAAGACCCACTATTCT",5,67.12,6.25,-4.59,0.41,1.5,1.17,0.01,">1 nonsynonymous","N40W C61N Y93F T170R",4
"lib2","SARS-CoV-2","TAAGACCCCTACGCGC",3,96.28,10.89,0.05,0.06,2.98,1.04,0,">1 nonsynonymous","L5P H189Y",2
"lib2","SARS-CoV-2","TAAGACCCGGTATCTA",1,29.03,10.77,-0.07,0.06,2.86,1.14,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","TAAGACCCTATGAGAG",6,98.21,10.05,-0.79,0.07,2.35,1.01,0,">1 nonsynonymous","W106A N120Q",2
"lib2","SARS-CoV-2","TAAGACCGCATTCGGG",13,1.18,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","TAAGACCTCGGCATAA",1,23.29,6,-4.84,2,1.5,1.14,0.02,"1 nonsynonymous","G101P",1
"lib2","SARS-CoV-2","TAAGACGAATGACACT",4,53.54,10.59,-0.24,0.06,2.95,1.06,0,"1 nonsynonymous","G155M",1
"lib2","SARS-CoV-2","TAAGACGACTACAATA",2,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120V I138K",2
"lib2","SARS-CoV-2","TAAGACGCCTGCGGTC",3,48.29,10.72,-0.11,0.03,2.96,1.04,0,">1 nonsynonymous","R16H F47I T55K",3
"lib2","SARS-CoV-2","TAAGACGGTGTGACTT",19,1266.8,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L57C T100L N120Q R179M",4
"lib2","SARS-CoV-2","TAAGACGTAACGACAA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R K128W T201K",3
"lib2","SARS-CoV-2","TAAGACGTACTCGATG",9,122.45,6.21,-4.63,0.66,1.5,1.2,0.02,">1 nonsynonymous","G51S S69L L122F",3
"lib2","SARS-CoV-2","TAAGACGTCCCCGAGA",3,62.48,9.94,-0.9,0.06,2.68,1.03,0,">1 nonsynonymous","A14N D90L I142L",3
"lib2","SARS-CoV-2","TAAGACTAAAGGATAA",7,76.15,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","D68W",1
"lib2","SARS-CoV-2","TAAGACTATATGCGAT",3,12.59,6,-4.84,2,1.5,1.44,0.06,">1 nonsynonymous","N13V I104G P149I G155V",4
"lib2","SARS-CoV-2","TAAGACTCGGTAAACA",6,108.22,9.78,-1.06,0.04,2.89,1.07,0,">1 nonsynonymous","T85E Q168T",2
"lib2","SARS-CoV-2","TAAGACTCTGGCGAAC",2,34.98,10.26,-0.58,0.04,2.88,1.1,0,">1 nonsynonymous","S36L V180C",2
"lib2","SARS-CoV-2","TAAGACTGACGCTCGG",1,9.79,10.58,-0.26,0.09,2.99,1,0,">1 nonsynonymous","L5Q N30F Y39F C61S",4
"lib2","SARS-CoV-2","TAAGACTGAGTTTGGA",11,256.91,10.15,-0.68,0.05,2.8,1.05,0,">1 nonsynonymous","F70M K199S",2
"lib2","SARS-CoV-2","TAAGACTTAACTTGTA",2,8.26,10.72,-0.11,0.16,2.77,1.06,0.01,"1 nonsynonymous","S19N",1
"lib2","SARS-CoV-2","TAAGACTTTCTGGTAT",4,34.9,10.65,-0.19,0.05,2.95,1.04,0,">1 nonsynonymous","V11I S36V S45N N130S T201M",5
"lib2","SARS-CoV-2","TAAGAGAAAGTTCAAA",1,64.93,10.89,0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGAGAAATGTACCT",3,42.64,10.08,-0.75,0.08,2.36,1.09,0,">1 nonsynonymous","P133I S147H",2
"lib2","SARS-CoV-2","TAAGAGAGAATAAATT",9,1.08,NA,NA,NA,NA,NA,NA,"stop","D90L F99I I104T E154* F156S V180F",6
"lib2","SARS-CoV-2","TAAGAGAGCTGATAGA",14,95.9,10.72,-0.12,0.04,2.97,1.04,0,">1 nonsynonymous","C61L T201S",2
"lib2","SARS-CoV-2","TAAGAGAGGATATATC",2,22.63,7.38,-3.46,0.28,1.5,1.09,0.02,">1 nonsynonymous","N107S Y119L T170F",3
"lib2","SARS-CoV-2","TAAGAGAGTCATTAGC",14,163.61,10.13,-0.7,0.03,2.97,1.02,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","TAAGAGCCGACTATTC",2,31.16,9.98,-0.86,0.09,2.15,1.02,0,">1 nonsynonymous","S19A D98W T148S",3
"lib2","SARS-CoV-2","TAAGAGGAAAGAAGCG",7,90.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P L38M D98S T170D",4
"lib2","SARS-CoV-2","TAAGAGGAAGTCGACT",3,95.86,10.34,-0.49,0.05,2.91,1.1,0,">1 nonsynonymous","C61H D90Y T201K",3
"lib2","SARS-CoV-2","TAAGAGGATAATCTAA",6,59.32,7.56,-3.27,0.24,1.5,1.08,0.02,">1 nonsynonymous","E10Q C158A",2
"lib2","SARS-CoV-2","TAAGAGGCCTGTCCAG",1,16.61,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","A33E G83V I88R K128C E154P",5
"lib2","SARS-CoV-2","TAAGAGGGAAAAGGGT",4,2.29,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","TAAGAGGGAGAAAAAC",2,59.72,9.73,-1.1,0.06,2.81,1.05,0,">1 nonsynonymous","C6M K114V P197T",3
"lib2","SARS-CoV-2","TAAGAGGTAGAGTTCA",1,31.39,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P82W D112K S139F",3
"lib2","SARS-CoV-2","TAAGAGGTATAGCTGT",6,432.16,8.15,-2.68,0.07,1.68,1.04,0,">1 nonsynonymous","R27G N40L K87D",3
"lib2","SARS-CoV-2","TAAGAGGTGCATCCCA",16,191.52,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N4L I28A K48N F126T",4
"lib2","SARS-CoV-2","TAAGAGGTGTGTCTTA",11,71.95,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20E N157S T201L",3
"lib2","SARS-CoV-2","TAAGAGTATGGATGGG",4,54.66,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37P V77S K94W L122P",4
"lib2","SARS-CoV-2","TAAGAGTCGGATGTGT",14,118.42,8.65,-2.19,0.17,1.5,1.09,0.01,">1 nonsynonymous","N1V N40V V77M",3
"lib2","SARS-CoV-2","TAAGAGTGAAAAACAT",8,3400.38,10.49,-0.34,0.03,2.91,1.03,0,">1 nonsynonymous","L5R E154S S184L",3
"lib2","SARS-CoV-2","TAAGAGTGTAAAAAAG",4,21.9,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G9E Y119V I138A C158A V173P",5
"lib2","SARS-CoV-2","TAAGAGTTAGCACACT",3,44.65,9.84,-1,0.06,2.25,1.03,0,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","TAAGAGTTCCTAATAA",2,72.68,10.49,-0.35,0.04,2.96,1.02,0,">1 nonsynonymous","A33L L57D S200I",3
"lib2","SARS-CoV-2","TAAGAGTTCCTTGACG",3,18,10.21,-0.62,0.12,2.75,1,0.01,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","TAAGAGTTGAGACTTC",5,222.52,10.64,-0.2,0.03,2.91,1.09,0,"1 nonsynonymous","R78D",1
"lib2","SARS-CoV-2","TAAGATAAAACTAATG",13,123.52,10.86,0.02,0.06,2.9,1.1,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","TAAGATAAAATACTTT",1,24.13,10.02,-0.81,0.09,2.81,1.07,0,">1 nonsynonymous","L60Q V173P",2
"lib2","SARS-CoV-2","TAAGATAAACGCATAC",9,47.43,6.01,-4.83,0.38,3,1.15,0,">1 nonsynonymous","G86C G101L",2
"lib2","SARS-CoV-2","TAAGATAAACTACAAC",4,39.96,9.21,-1.62,0.07,2.98,1.07,0,">1 nonsynonymous","N40Y Y119S",2
"lib2","SARS-CoV-2","TAAGATAAGACAACGA",18,232.9,10.82,-0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGATAAGTATGAGG",13,8.45,NA,NA,NA,NA,NA,NA,"stop","S45Y F62* N107P",3
"lib2","SARS-CoV-2","TAAGATAATTTTGTAA",3,86.91,10.57,-0.26,0.03,2.91,1.11,0,"1 nonsynonymous","N30Q",1
"lib2","SARS-CoV-2","TAAGATACAAGGTTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R V103R Y143F T170Y V173G",5
"lib2","SARS-CoV-2","TAAGATACCAATGCCA",10,83.89,10.76,-0.07,0.06,2.92,1.05,0,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","TAAGATACCATCTCTA",4,25.16,6.13,-4.71,0.76,1.85,1.12,0.03,">1 nonsynonymous","S19V G51E K94Q G101R",4
"lib2","SARS-CoV-2","TAAGATACGAATGATG",16,158.26,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40T C158F",2
"lib2","SARS-CoV-2","TAAGATACTTGTAACA",5,18.55,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F44D L95H N110S C150F",4
"lib2","SARS-CoV-2","TAAGATAGAGAAGGAA",1,56.24,10.43,-0.41,0.03,2.9,1.05,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","TAAGATAGCACATCAA",7,72.82,8.39,-2.45,0.1,2.45,1.05,0,">1 nonsynonymous","C6Y G117N",2
"lib2","SARS-CoV-2","TAAGATAGCAGCACAT",10,70.66,6,-4.84,1.26,1.5,1.21,0.02,">1 nonsynonymous","A14G L60H I80Y",3
"lib2","SARS-CoV-2","TAAGATAGCATAGCGG",1,24.19,10.83,-0.01,0.08,3,1.02,0,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","TAAGATAGTATCTGCC",4,42.09,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","L5R Y35S P133I E154Y",4
"lib2","SARS-CoV-2","TAAGATATAAAAAGGA",5,112.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4F N30Y T63I Y91T D98A",5
"lib2","SARS-CoV-2","TAAGATATAAACAGGT",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V Y119A R127H T148C",4
"lib2","SARS-CoV-2","TAAGATATATCGCTCC",1,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q N157S",2
"lib2","SARS-CoV-2","TAAGATATCATAAGAC",9,41.67,6.32,-4.51,0.85,1.5,1.27,0.04,">1 nonsynonymous","S41Y P54T N107T L122K K128L N157M S200H",7
"lib2","SARS-CoV-2","TAAGATATCCAAGCGA",11,159.98,10.34,-0.49,0.03,2.92,1.04,0,">1 nonsynonymous","N40M P149I",2
"lib2","SARS-CoV-2","TAAGATATTATTAAAA",8,53.28,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V77E C102W K128S",3
"lib2","SARS-CoV-2","TAAGATCAAAATATAG",14,291.69,8.28,-2.56,0.07,1.91,1.1,0,">1 nonsynonymous","C6I F62S G174F",3
"lib2","SARS-CoV-2","TAAGATCAAAGAGGAA",2,23.14,9.69,-1.15,0.12,1.96,1.21,0.01,">1 nonsynonymous","T46P T55S T148K",3
"lib2","SARS-CoV-2","TAAGATCATTAAAAGC",2,0.92,NA,NA,NA,NA,NA,NA,"stop","G51I T85* T100D S184L",4
"lib2","SARS-CoV-2","TAAGATCCAATAAATG",20,339.2,10.27,-0.57,0.04,2.69,1.03,0,">1 nonsynonymous","I2E A81V",2
"lib2","SARS-CoV-2","TAAGATCCAATACCTA",3,0.03,NA,NA,NA,NA,NA,NA,"stop","P96M N118* G172D",3
"lib2","SARS-CoV-2","TAAGATCCATAAAAAG",5,12.25,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","R78A N107H I142S",3
"lib2","SARS-CoV-2","TAAGATCCCCGAAACC",5,72.87,10.75,-0.08,0.03,2.92,1.08,0,"1 nonsynonymous","D97M",1
"lib2","SARS-CoV-2","TAAGATCCCTGCGACA",9,0.31,NA,NA,NA,NA,NA,NA,"stop","V37* T55G T100R Q144N G152R T201*",6
"lib2","SARS-CoV-2","TAAGATCCTACTCAAC",21,169.32,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51P G83K I88Y R124P",4
"lib2","SARS-CoV-2","TAAGATCTAGGCACAT",8,90.62,10.82,-0.02,0.05,2.91,1.1,0,"1 nonsynonymous","Y39M",1
"lib2","SARS-CoV-2","TAAGATGAAACACACC",2,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S L95R Y121K S129F I138W",5
"lib2","SARS-CoV-2","TAAGATGACAACGCTA",1,4.24,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAAGATGAGGTTTCAA",1,39.44,10.52,-0.31,0.04,2.92,1.06,0,">1 nonsynonymous","K56T G155T",2
"lib2","SARS-CoV-2","TAAGATGATAACTCCA",8,50.07,6,-4.84,2,3,1.35,0.01,">1 nonsynonymous","C6V G51S L95N I104F",4
"lib2","SARS-CoV-2","TAAGATGCTAGACGCA",3,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y V103D",2
"lib2","SARS-CoV-2","TAAGATGGAAAATTCC",3,84.88,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N151L Y159K G166R",3
"lib2","SARS-CoV-2","TAAGATGTTATTTGGA",4,56.3,10.12,-0.72,0.06,2.66,1.02,0,">1 nonsynonymous","A18V R27S",2
"lib2","SARS-CoV-2","TAAGATTAATTGCTGT",5,61.19,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F44A K94T T201Q",3
"lib2","SARS-CoV-2","TAAGATTATTCAGATG",5,30.94,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","K26L V71L A105K K128Q G174C",5
"lib2","SARS-CoV-2","TAAGATTCAAACAGTG",12,0.63,NA,NA,NA,NA,NA,NA,"stop","G9R I88Y S129* P149L G166N",5
"lib2","SARS-CoV-2","TAAGATTGGTTGCCGT",10,191.64,8.99,-1.85,0.05,2.95,1.11,0,"1 nonsynonymous","N157Q",1
"lib2","SARS-CoV-2","TAAGATTGTGAATAAC",5,2.15,NA,NA,NA,NA,NA,NA,"stop","S43T Q168* Y178*",3
"lib2","SARS-CoV-2","TAAGATTTCAAAGATT",4,116.15,10.67,-0.16,0.07,2.64,1.11,0,">1 nonsynonymous","L5G K114R",2
"lib2","SARS-CoV-2","TAAGATTTTTTAAACC",4,8.07,9.27,-1.56,0.22,2.01,1,0.02,">1 nonsynonymous","A14W L122R R136H",3
"lib2","SARS-CoV-2","TAAGCAAAACGAAACA",3,18.76,10.85,0.02,0.07,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCAAAATTTGAAG",19,3.1,NA,NA,NA,NA,NA,NA,"stop","S41Q Y50I Q79* G146S",4
"lib2","SARS-CoV-2","TAAGCAAAGGCAACTG",3,30.98,8.91,-1.92,0.14,2.77,1.2,0.01,">1 nonsynonymous","G9Q Y121M G166M",3
"lib2","SARS-CoV-2","TAAGCAAAGGGAGAAA",7,69.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7T K94Q D137Y",3
"lib2","SARS-CoV-2","TAAGCAAATAGTACAA",2,34.29,10.7,-0.14,0.06,2.82,1.2,0,"1 nonsynonymous","K114M",1
"lib2","SARS-CoV-2","TAAGCAACCCCTCGAG",6,43.78,6,-4.84,2,2.06,1.11,0.01,">1 nonsynonymous","E10N P82A L183C",3
"lib2","SARS-CoV-2","TAAGCAACGAACTCTG",6,10.17,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N109T N130L V182M",3
"lib2","SARS-CoV-2","TAAGCAACGACAACAT",2,77.44,9.46,-1.38,0.04,2.92,1.1,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","TAAGCAACGTAAGCGT",17,212.16,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T63I N110M V181Y",3
"lib2","SARS-CoV-2","TAAGCAAGTCCCATCC",1,27.59,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P96I F134C T201L",3
"lib2","SARS-CoV-2","TAAGCAATAAATAATT",2,6.85,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","D137P",1
"lib2","SARS-CoV-2","TAAGCAATACAGGCCC",1,118.01,9.2,-1.64,0.03,2.38,1.05,0,">1 nonsynonymous","T3A F44Y D98R Y121F F156Y K198V",6
"lib2","SARS-CoV-2","TAAGCAATATAGTCTT",4,105.59,9.11,-1.73,0.08,2.06,1.08,0,">1 nonsynonymous","F44T N107K",2
"lib2","SARS-CoV-2","TAAGCAATATCAATAA",2,52.71,10.99,0.16,0.29,2.65,1.07,0.02,">1 nonsynonymous","G9N S43R D97I Y178N",4
"lib2","SARS-CoV-2","TAAGCAATTTACAAGG",2,46.82,8.66,-2.17,0.08,2.88,1.14,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","TAAGCACAACTTGATA",4,74.59,10.21,-0.63,0.07,2.77,1.07,0,">1 nonsynonymous","G83R D98V K132R",3
"lib2","SARS-CoV-2","TAAGCACACACAGCCA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","N1* T15A C31Q S129I",4
"lib2","SARS-CoV-2","TAAGCACAGTTCACAT",2,7.3,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","N64L K128V C158W V173R",4
"lib2","SARS-CoV-2","TAAGCACATAATCTTA",1,92.88,10.3,-0.54,0.16,1.94,1.11,0.01,">1 nonsynonymous","K87V Y123V",2
"lib2","SARS-CoV-2","TAAGCACCTAAAAGTT",10,135.02,9.7,-1.13,0.05,2.71,1.04,0,">1 nonsynonymous","G9P A22R F99W P169S",4
"lib2","SARS-CoV-2","TAAGCACCTTTCAGCG",13,192.61,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G83N E135R L162H K199N",4
"lib2","SARS-CoV-2","TAAGCACGAACCTCAG",20,312.6,9.98,-0.86,0.05,2.22,1.04,0,">1 nonsynonymous","T15M Y35W Y93F",3
"lib2","SARS-CoV-2","TAAGCACGTAGAAAGC",8,31.42,6,-4.84,2,2.97,1.33,0.01,">1 nonsynonymous","E10G L38S T63S V103S K132L",5
"lib2","SARS-CoV-2","TAAGCACTACAATCTT",4,18,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","T55A S69M K87L S113N S139Q G152Y",6
"lib2","SARS-CoV-2","TAAGCACTTGCGGTTA",1,35.15,10.86,0.02,0.06,2.96,1.04,0,"1 nonsynonymous","T63S",1
"lib2","SARS-CoV-2","TAAGCAGAATGCTGCC",6,15.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5P V103N K132L G152C",4
"lib2","SARS-CoV-2","TAAGCAGAATTTATGA",2,14.67,10.94,0.1,0.07,3,1.01,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","TAAGCAGCCTAGATAT",4,17.45,10.77,-0.07,0.05,3,1.01,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","TAAGCAGGCCTCCTTA",17,303.49,10.44,-0.39,0.04,2.95,1.06,0,"1 nonsynonymous","E154D",1
"lib2","SARS-CoV-2","TAAGCAGTATATAAAC",7,126.83,10.82,-0.02,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCAGTGCATTACA",6,29.66,9.97,-0.87,0.08,2.77,1.05,0,">1 nonsynonymous","Y35C G116Q",2
"lib2","SARS-CoV-2","TAAGCAGTTATTTTGA",1,18.57,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C6G W23V Y35V K56W K87S S139A S200F",7
"lib2","SARS-CoV-2","TAAGCAGTTTATACCT",13,185.01,8.15,-2.68,0.11,2.33,1.07,0,">1 nonsynonymous","V77L S113L",2
"lib2","SARS-CoV-2","TAAGCAGTTTCACAAA",3,71.89,10.01,-0.82,0.07,2.8,1.03,0,">1 nonsynonymous","P7L N151F F156V",3
"lib2","SARS-CoV-2","TAAGCATAAACTTGCG",3,50.05,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N58V P82S D137E",3
"lib2","SARS-CoV-2","TAAGCATAAGGTACGT",2,33.32,10.97,0.14,0.05,2.98,1.04,0,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","TAAGCATAATATCAGA",1,23.58,9.76,-1.08,0.14,1.99,1.08,0.01,">1 nonsynonymous","G9W T15N G51A Y123F H189S",5
"lib2","SARS-CoV-2","TAAGCATACCCTAAAG",4,85.22,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y91I L122T E135L V153C",4
"lib2","SARS-CoV-2","TAAGCATATTATTAAT",2,6.12,8.47,-2.36,0.27,2.8,1,0.01,">1 nonsynonymous","T3I N13R F62T F156T G172M Q176R",6
"lib2","SARS-CoV-2","TAAGCATCGCCCCACC",1,14.79,10.51,-0.33,0.08,3,1.02,0,"1 nonsynonymous","Y121I",1
"lib2","SARS-CoV-2","TAAGCATCTCACTGCC",3,43.77,10.87,0.04,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCATGAGACATCA",3,29.28,9.36,-1.48,0.11,2,1.07,0.01,">1 nonsynonymous","C6S S41I S184L",3
"lib2","SARS-CoV-2","TAAGCATGGATAAAAC",5,74.84,10.35,-0.49,0.03,3,1.02,0,">1 nonsynonymous","Y121F F160P",2
"lib2","SARS-CoV-2","TAAGCATGGTCTCAAG",4,84.48,10.83,-0.01,0.05,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCATTTCCTGTCC",6,35.62,6.28,-4.56,0.59,1.5,1.17,0.02,">1 nonsynonymous","C6T V37L E76T N171S",4
"lib2","SARS-CoV-2","TAAGCCAAAAAGAGGT",7,48.79,10.83,0,0.1,2.84,1.18,0,">1 nonsynonymous","I2P N64H",2
"lib2","SARS-CoV-2","TAAGCCAACCTAAACT",1,36.67,10.64,-0.2,0.06,2.83,1.2,0,">1 nonsynonymous","K48I C61R",2
"lib2","SARS-CoV-2","TAAGCCAACCTAACAG",1,9.11,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","N118F D137E N157V",3
"lib2","SARS-CoV-2","TAAGCCACTCCTCCTT",4,19.75,10.76,-0.08,0.09,2.77,1.2,0,">1 nonsynonymous","D98Q S129K T148S",3
"lib2","SARS-CoV-2","TAAGCCAGAACTATTA",2,31.11,9.11,-1.72,0.05,2.96,1.04,0,">1 nonsynonymous","Y35A N120E T170E",3
"lib2","SARS-CoV-2","TAAGCCATAGCATGGG",9,85.62,6.33,-4.5,0.64,1.5,1.25,0.03,">1 nonsynonymous","S43G L60T V103M",3
"lib2","SARS-CoV-2","TAAGCCATGGTACTTT",3,21.76,10.81,-0.02,0.07,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCCCACTTAGCAT",11,47.61,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S43V G86S D98F I104L I138Y",5
"lib2","SARS-CoV-2","TAAGCCCAGACCCTTC",6,63.8,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","S19F V103K R127P N151T",4
"lib2","SARS-CoV-2","TAAGCCCGATCCCGCG",6,1.93,NA,NA,NA,NA,NA,NA,"stop","F8W C49M G83S L131*",4
"lib2","SARS-CoV-2","TAAGCCCGATTTTCTA",12,4.39,NA,NA,NA,NA,NA,NA,"stop","C6* K56Q D97R I104* L122E",5
"lib2","SARS-CoV-2","TAAGCCCTCAACATCC",2,0,NA,NA,NA,NA,NA,NA,"stop","I80P L111F Y165*",3
"lib2","SARS-CoV-2","TAAGCCGAACCAGTCA",6,62.33,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G83E D97K N107F P133F Y178S",5
"lib2","SARS-CoV-2","TAAGCCGAAGACTCCT",2,27.58,6.71,-4.12,0.47,1.5,1.09,0.02,">1 nonsynonymous","D90Y L162S",2
"lib2","SARS-CoV-2","TAAGCCGAATTCAAGG",15,267.84,10.49,-0.34,0.04,2.9,1.08,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","TAAGCCGACTTATAAG",16,153.36,9.81,-1.03,0.05,1.96,1.03,0,">1 nonsynonymous","A18M Q163P",2
"lib2","SARS-CoV-2","TAAGCCGAGATCGAAC",1,17.1,6.89,-3.95,0.41,1.5,1.08,0.03,">1 nonsynonymous","I2L N58Y K94R G146A T170D",5
"lib2","SARS-CoV-2","TAAGCCGGCTGCATTT",5,66.08,10.74,-0.09,0.03,2.94,1.08,0,">1 nonsynonymous","Y35V S53V P197I",3
"lib2","SARS-CoV-2","TAAGCCGTAAACAGGC",5,39.13,6.36,-4.48,0.62,1.5,1.18,0.02,">1 nonsynonymous","F17Y G86M E154Q",3
"lib2","SARS-CoV-2","TAAGCCTAGTCTATTG",6,79.53,10.53,-0.31,0.05,2.93,1.05,0,">1 nonsynonymous","N1E P54A I138Y",3
"lib2","SARS-CoV-2","TAAGCCTATTACGCTG",3,29.05,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","D98F W106A E154M",3
"lib2","SARS-CoV-2","TAAGCGAAAATGAACA",21,267.94,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","S36T R127L Y143V T148S E154M",5
"lib2","SARS-CoV-2","TAAGCGAAAATGAGGT",16,76.91,9.62,-1.21,0.07,1.99,1.04,0,">1 nonsynonymous","D34A G51Q",2
"lib2","SARS-CoV-2","TAAGCGACGCGGTATC",3,17.01,6.57,-4.27,0.63,2.58,1.21,0.01,">1 nonsynonymous","F8S S43D N64E A89H E141S",5
"lib2","SARS-CoV-2","TAAGCGACTACCGGCG",1,19.86,7.51,-3.33,0.36,1.5,1.19,0.04,">1 nonsynonymous","F12T R16L G166R",3
"lib2","SARS-CoV-2","TAAGCGAGTAGCTCAA",9,5.15,NA,NA,NA,NA,NA,NA,"stop","S41F F62N Q84* I88* K94V I142M A192V",7
"lib2","SARS-CoV-2","TAAGCGATAATAACTG",18,3.6,NA,NA,NA,NA,NA,NA,"stop","L60S Y119I P149S E154* T170S",5
"lib2","SARS-CoV-2","TAAGCGATCACATCAC",5,0.21,NA,NA,NA,NA,NA,NA,"stop","V20S K87L I138*",3
"lib2","SARS-CoV-2","TAAGCGCCATATCAAG",6,38.35,9.78,-1.05,0.07,2.72,1.03,0,">1 nonsynonymous","R16L S41N S43Y C61M K128I",5
"lib2","SARS-CoV-2","TAAGCGGAAATCCTTT",1,10.69,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S29K F44L D68A P96T Q176W T201V",6
"lib2","SARS-CoV-2","TAAGCGGATGTAGTAT",6,87.29,10.84,0,0.05,2.96,1.04,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","TAAGCGGCATTCCGAG",5,112.53,10.73,-0.11,0.03,2.95,1.06,0,">1 nonsynonymous","A33Q P54V",2
"lib2","SARS-CoV-2","TAAGCGGTCCGCTCCA",8,64.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86E F126S G174D",3
"lib2","SARS-CoV-2","TAAGCGGTTTAATAAT",1,21.92,6.39,-4.45,0.54,1.5,1.12,0.02,">1 nonsynonymous","T46Q D97L D112E S139A Q144S",5
"lib2","SARS-CoV-2","TAAGCGTGCTCCGATA",5,119.29,10.8,-0.04,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCTAACAATATGT",19,170.19,10.17,-0.67,0.05,2.69,1.04,0,">1 nonsynonymous","T55I P96N",2
"lib2","SARS-CoV-2","TAAGCTAACCAAGCGT",12,148.45,9.31,-1.52,0.1,1.5,1.06,0,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","TAAGCTAACCCACTGT",3,68.34,10.07,-0.76,0.07,2.58,1.03,0,">1 nonsynonymous","I2V K56T L95V S108T S164V",5
"lib2","SARS-CoV-2","TAAGCTAACTTAAATG",13,179.13,9.2,-1.64,0.03,2.87,1.08,0,">1 nonsynonymous","F44L G166V",2
"lib2","SARS-CoV-2","TAAGCTAATATAAGCT",3,56.38,6,-4.84,1.09,1.5,1.12,0.01,">1 nonsynonymous","V77M Y165E",2
"lib2","SARS-CoV-2","TAAGCTAATATGTTAA",1,19.49,9.04,-1.8,0.18,1.78,1.14,0.01,">1 nonsynonymous","R16L D90G Y143H",3
"lib2","SARS-CoV-2","TAAGCTACAAATTGAT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","K56* L60V",2
"lib2","SARS-CoV-2","TAAGCTACTTCCATTT",3,15.15,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T3V A105T N118S L131A S164P",5
"lib2","SARS-CoV-2","TAAGCTAGGACCGCCT",11,95.13,10.84,0,0.05,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCTAGGGAGTGAA",5,38.21,6.48,-4.36,0.49,1.5,1.14,0.03,">1 nonsynonymous","F8N A14D S36E P96S",4
"lib2","SARS-CoV-2","TAAGCTATTACCAAGG",3,61.44,8.63,-2.21,0.07,3,1.03,0,"1 nonsynonymous","S113N",1
"lib2","SARS-CoV-2","TAAGCTCAAATGAAAC",1,8.68,7.81,-3.02,0.36,1.5,1.09,0.04,">1 nonsynonymous","F47M N58Y G117I",3
"lib2","SARS-CoV-2","TAAGCTCATAAATAAA",3,10.68,10.26,-0.57,0.06,2.95,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCTCATATATTCA",19,150.1,9.41,-1.43,0.06,1.81,1.07,0,">1 nonsynonymous","G51L N64S K114Y L122N T140K",5
"lib2","SARS-CoV-2","TAAGCTCGCGAGACAA",5,48,8.11,-2.73,0.13,1.66,1.15,0.01,">1 nonsynonymous","Y35C S139Y",2
"lib2","SARS-CoV-2","TAAGCTCTTATATACT",7,63.25,6.2,-4.64,0.69,1.5,1.14,0.02,">1 nonsynonymous","N1L E10I S19G C61R R124S",5
"lib2","SARS-CoV-2","TAAGCTGAAACTTGTG",4,50.14,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","R25L F44N N107K P161F",4
"lib2","SARS-CoV-2","TAAGCTGAAAGCGAGC",5,17.88,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","Y50S Y121L P133R",3
"lib2","SARS-CoV-2","TAAGCTGAACACACAA",13,122.94,10.79,-0.04,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGCTGCCCAAATCC",4,60.59,10.07,-0.76,0.05,2.91,1.1,0,">1 nonsynonymous","T55M A145G F156L",3
"lib2","SARS-CoV-2","TAAGCTGCGAGGACAT",12,6.28,NA,NA,NA,NA,NA,NA,"stop","L38P Y50*",2
"lib2","SARS-CoV-2","TAAGCTGCTACTCAAA",5,173.6,10.28,-0.55,0.03,2.84,1.04,0,">1 nonsynonymous","V32P T201K",2
"lib2","SARS-CoV-2","TAAGCTGGGTACTCAC",4,66.56,10.83,0,0.06,2.95,1.06,0,"1 nonsynonymous","V153M",1
"lib2","SARS-CoV-2","TAAGCTGTGTTAGCGA",8,93.2,6.98,-3.85,0.11,1.79,1.16,0,"1 nonsynonymous","C150Y",1
"lib2","SARS-CoV-2","TAAGCTGTTGAAACAA",7,121.35,10.57,-0.26,0.04,2.78,1.2,0,"1 nonsynonymous","T55C",1
"lib2","SARS-CoV-2","TAAGCTTAATTCTTTC",21,7.01,NA,NA,NA,NA,NA,NA,"stop","S41* Y91R N120F S129I",4
"lib2","SARS-CoV-2","TAAGCTTAGCAACAGT",7,95.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5P T46G T63V N120F G155E",5
"lib2","SARS-CoV-2","TAAGCTTAGGAAACGT",3,5.01,6,-4.84,2,3,1.06,0,">1 nonsynonymous","E10P N64Q K94M T100H R124I N157L",6
"lib2","SARS-CoV-2","TAAGCTTAGTAACAAC",7,26.56,10.71,-0.12,0.04,3,1.01,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TAAGCTTCCGTATATT",2,11.24,10.89,0.06,0.08,2.93,1.08,0,"1 nonsynonymous","T201A",1
"lib2","SARS-CoV-2","TAAGCTTCTTAGATGA",4,89.96,7.99,-2.84,0.08,1.91,1.09,0,">1 nonsynonymous","N40E I142T P177S",3
"lib2","SARS-CoV-2","TAAGCTTTACGAAGAC",8,215.92,9.51,-1.33,0.03,2.91,1.08,0,">1 nonsynonymous","K56Q Y119S",2
"lib2","SARS-CoV-2","TAAGCTTTATGAGCAG",6,111.51,8.58,-2.26,0.09,1.8,1.08,0,">1 nonsynonymous","V37G Y119R F134D P149G",4
"lib2","SARS-CoV-2","TAAGCTTTGAGCACTC",7,6.69,NA,NA,NA,NA,NA,NA,"stop","C6V G51N T201*",3
"lib2","SARS-CoV-2","TAAGCTTTTCAATCAG",1,27.5,6.12,-4.72,0.35,1.84,1.05,0,"1 nonsynonymous","F126D",1
"lib2","SARS-CoV-2","TAAGGAAAACTGAGGG",2,13.26,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A18M A105D G146K N171R",4
"lib2","SARS-CoV-2","TAAGGAAAATTGATAT",18,249.09,9.62,-1.22,0.08,1.75,1.09,0,">1 nonsynonymous","V32L V173T S200Q",3
"lib2","SARS-CoV-2","TAAGGAAAATTGCGGA",1,69.14,10.04,-0.79,0.04,2.92,1.05,0,">1 nonsynonymous","V32W T100Q P169N",3
"lib2","SARS-CoV-2","TAAGGAAACCTCTGAA",1,5.9,9.34,-1.49,0.35,1.85,1.18,0.02,">1 nonsynonymous","F12Y Y119N",2
"lib2","SARS-CoV-2","TAAGGAAACGTACAAA",2,12.68,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","C6S I28T D90R D98G R136A T201Y",6
"lib2","SARS-CoV-2","TAAGGAAAGAGGCTCG",5,48.61,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35R V103D",2
"lib2","SARS-CoV-2","TAAGGAACAAAGGTTC",2,26.56,7.81,-3.03,0.28,1.5,1.08,0.04,">1 nonsynonymous","K94V N151I K198F",3
"lib2","SARS-CoV-2","TAAGGAACATTAATAG",4,69.06,10.53,-0.3,0.07,2.84,1.16,0,">1 nonsynonymous","L5D A42S L60C R78S N151M",5
"lib2","SARS-CoV-2","TAAGGAACCTACGCTT",8,194.24,10.67,-0.17,0.02,2.95,1.05,0,">1 nonsynonymous","R16C C61E",2
"lib2","SARS-CoV-2","TAAGGAACGTAACATC",4,63.35,10.74,-0.1,0.05,2.95,1.09,0,">1 nonsynonymous","E154N T201V",2
"lib2","SARS-CoV-2","TAAGGAACTAGAACAG",3,21.3,10.69,-0.14,0.09,2.86,1.16,0,"1 nonsynonymous","S41Q",1
"lib2","SARS-CoV-2","TAAGGAATCAACAGAC",3,0,NA,NA,NA,NA,NA,NA,"stop","T3I N30R V37A F44M N64H P96F V103D A192*",8
"lib2","SARS-CoV-2","TAAGGAATCGAACGAC",4,0.32,NA,NA,NA,NA,NA,NA,"stop","K26* V37E N58I K87L K94E Q168K",6
"lib2","SARS-CoV-2","TAAGGACAATACCCAT",12,226.04,10.77,-0.06,0.04,2.94,1.07,0,"1 nonsynonymous","A67L",1
"lib2","SARS-CoV-2","TAAGGACAGGTGGATT",10,52.69,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N92Y P169L",2
"lib2","SARS-CoV-2","TAAGGACATGTCATTT",5,28.89,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","F99L P149F P177S",3
"lib2","SARS-CoV-2","TAAGGACCATGAACAG",2,17.16,10.02,-0.81,0.09,2.7,1.01,0,">1 nonsynonymous","N107S K128R T148A T201Y",4
"lib2","SARS-CoV-2","TAAGGACGCTCCTAAC",1,23.03,10.7,-0.13,0.11,2.78,1.24,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGACGGCCAATCC",9,139.78,10.82,-0.01,0.07,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGACGTAACCGCC",10,128.68,10.19,-0.65,0.02,2.97,1.03,0,">1 nonsynonymous","C61M N110K I138Q F156L",4
"lib2","SARS-CoV-2","TAAGGACTAACAATTC",1,35.65,9.84,-1,0.05,2.96,1,0,">1 nonsynonymous","N58P R73S K128T",3
"lib2","SARS-CoV-2","TAAGGACTACTCTCAT",6,33.74,9.39,-1.45,0.08,2.94,1.02,0,">1 nonsynonymous","K26E N64S Y119T G166Q K199V",5
"lib2","SARS-CoV-2","TAAGGACTAGTCTAAA",2,17.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9D N30L I80W F99V",4
"lib2","SARS-CoV-2","TAAGGACTTGACACAC",10,128.68,9.88,-0.95,0.07,2.2,1.04,0,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","TAAGGAGACAGGATAC",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56E F99D K114I E135L",4
"lib2","SARS-CoV-2","TAAGGAGAGATTGAAT",9,40.83,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C49M F99D N130R N157Y F167H",5
"lib2","SARS-CoV-2","TAAGGAGATAATGTAT",16,180.17,8.82,-2.01,0.28,1.5,1,0.03,">1 nonsynonymous","F12L R27V S45F F62L V181T",5
"lib2","SARS-CoV-2","TAAGGAGGACAGATAG",6,35.98,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N4E P82Q K128R R179W",4
"lib2","SARS-CoV-2","TAAGGAGTCTACCGTC",4,32.62,6.14,-4.7,0.61,1.5,1.09,0.01,">1 nonsynonymous","D97V C150R",2
"lib2","SARS-CoV-2","TAAGGAGTTATCGTGA",2,16.06,10.74,-0.1,0.11,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TAAGGATAAAGGAACC",2,43.21,10.87,0.03,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGATACAAGGACA",3,78.79,10.91,0.07,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGATATATGTTAT",2,40.35,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G51I Y91E N171G",3
"lib2","SARS-CoV-2","TAAGGATATGCCGATT",1,33.25,6.05,-4.78,1,1.5,1.18,0.02,">1 nonsynonymous","N92L G152F P169S",3
"lib2","SARS-CoV-2","TAAGGATCAACTACTC",3,29.13,10.54,-0.3,0.09,2.97,1.08,0,">1 nonsynonymous","T46Y N171S",2
"lib2","SARS-CoV-2","TAAGGATCGCTTTAAT",5,32,7.65,-3.19,0.16,2.47,1.18,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","TAAGGATCGTGCGCAC",7,22.12,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D97L I104D T201R",3
"lib2","SARS-CoV-2","TAAGGATGACATTCCC",2,96.17,9.28,-1.55,0.04,2.98,1.05,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TAAGGATTCATTGGTA",3,19.92,9.83,-1,0.17,2.05,1.22,0.02,">1 nonsynonymous","L5Q A81N H189L",3
"lib2","SARS-CoV-2","TAAGGATTTTTGGCCT",12,159.72,8.7,-2.14,0.06,2.9,1.05,0,"1 nonsynonymous","I142D",1
"lib2","SARS-CoV-2","TAAGGCAACACTAATA",5,0.35,NA,NA,NA,NA,NA,NA,"stop","F62A L131* Q144L",3
"lib2","SARS-CoV-2","TAAGGCAATTACCAGT",7,21,6.3,-4.54,0.32,3,1.21,0.01,">1 nonsynonymous","T3K A33R S45P N120Q Q144P G174S",6
"lib2","SARS-CoV-2","TAAGGCACTAGAATCA",2,39.65,10.58,-0.26,0.05,2.94,1.04,0,">1 nonsynonymous","T3A F44M N110E T201M",4
"lib2","SARS-CoV-2","TAAGGCACTTAACTAG",6,111.08,9.89,-0.95,0.07,2.54,1.07,0,">1 nonsynonymous","F44Y A105F",2
"lib2","SARS-CoV-2","TAAGGCACTTGCCCCT",11,152.08,10.42,-0.42,0.03,2.83,1.08,0,">1 nonsynonymous","L5S R16N W106F",3
"lib2","SARS-CoV-2","TAAGGCATACACAGAA",2,40.28,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","K56W Y91L L131K T140N P177M",5
"lib2","SARS-CoV-2","TAAGGCATATCCCGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72Q E76Y",2
"lib2","SARS-CoV-2","TAAGGCATTGGATTAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","K94* T100A N120F K132E S200P",5
"lib2","SARS-CoV-2","TAAGGCCAACGAGATA",5,0.09,NA,NA,NA,NA,NA,NA,"stop","A33T F99* Q144F",3
"lib2","SARS-CoV-2","TAAGGCCAATTGTCAG",8,31.14,6,-4.84,0.75,1.5,1.12,0.02,">1 nonsynonymous","P7G D68Q L162S",3
"lib2","SARS-CoV-2","TAAGGCCAGAAACAGC",20,104.17,8.43,-2.4,0.25,1.5,1,0.02,">1 nonsynonymous","E76K D90F",2
"lib2","SARS-CoV-2","TAAGGCCCAATCTTCG",4,99.38,10.81,-0.03,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGCCCTGTATATT",1,6.82,9.65,-1.18,0.17,2.08,1.12,0.01,">1 nonsynonymous","P7S V20T",2
"lib2","SARS-CoV-2","TAAGGCCGTTAGCATA",5,163.72,8.49,-2.35,0.09,2.77,1.07,0,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","TAAGGCGAAATCCGCA",18,162.03,10.14,-0.69,0.06,2.47,1,0,">1 nonsynonymous","A14G F134S",2
"lib2","SARS-CoV-2","TAAGGCGAAATCTTAA",7,64.31,10.59,-0.24,0.14,2.85,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGCGAAGCTACGT",1,27.75,10.14,-0.69,0.11,2.65,1.1,0.01,">1 nonsynonymous","S41V L60P",2
"lib2","SARS-CoV-2","TAAGGCGCACGAGAAT",1,107.13,8.67,-2.17,0.05,2.81,1.07,0,">1 nonsynonymous","P54C L60Y Y119E K132M",4
"lib2","SARS-CoV-2","TAAGGCTAATTATTGA",5,3.97,NA,NA,NA,NA,NA,NA,"stop","D98F W106* I142K Q163S",4
"lib2","SARS-CoV-2","TAAGGCTCATTTGACA",8,0.24,NA,NA,NA,NA,NA,NA,"stop","N4T E10C A22* D97L L122N",5
"lib2","SARS-CoV-2","TAAGGCTGAAGACACA",3,74.23,10.3,-0.53,0.04,2.8,1.02,0,"1 nonsynonymous","G51E",1
"lib2","SARS-CoV-2","TAAGGCTGTGGTCTAG",1,50.41,11.02,0.18,0.06,2.87,1.12,0,"1 nonsynonymous","S164R",1
"lib2","SARS-CoV-2","TAAGGGAAATAGGTTC",11,85.71,9.56,-1.28,0.08,2.19,1.07,0,">1 nonsynonymous","C6R T140L P197Q",3
"lib2","SARS-CoV-2","TAAGGGAAGCAAAATC",3,0,NA,NA,NA,NA,NA,NA,"stop","E76* N120K E141N V182M P197A",5
"lib2","SARS-CoV-2","TAAGGGAATTAACGAG",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H C61A L95Y G116M R136G",5
"lib2","SARS-CoV-2","TAAGGGACGTTTACAT",4,33.07,10.15,-0.68,0.05,2.87,1.03,0,">1 nonsynonymous","A22V T140N",2
"lib2","SARS-CoV-2","TAAGGGAGTACTTAGC",7,54.52,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C150V G155I L162H",3
"lib2","SARS-CoV-2","TAAGGGATCCATTACC",2,15.98,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","D112C E135L Y175F",3
"lib2","SARS-CoV-2","TAAGGGATGTTGAAAA",8,0.77,NA,NA,NA,NA,NA,NA,"stop","R16* K94I S108N G117D L162Y",5
"lib2","SARS-CoV-2","TAAGGGCAAAATGTAC",8,51.75,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y35S P96L",2
"lib2","SARS-CoV-2","TAAGGGCACCCCACTT",1,18.39,6.45,-4.38,0.54,1.5,1.15,0.02,">1 nonsynonymous","Y50I N151K N157A",3
"lib2","SARS-CoV-2","TAAGGGCGTTTGAGAT",5,75.02,10.87,0.04,0.06,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGGCTCAGTTAAT",4,0.48,NA,NA,NA,NA,NA,NA,"stop","S69R A105*",2
"lib2","SARS-CoV-2","TAAGGGGAATCCATTT",1,2.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K132H",1
"lib2","SARS-CoV-2","TAAGGGGAGGTCACAA",1,42.08,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9R S36Q A42P R124I",4
"lib2","SARS-CoV-2","TAAGGGTGAATGCCTA",10,1323.33,8.44,-2.4,0.06,1.91,1.05,0,">1 nonsynonymous","I28K F156L",2
"lib2","SARS-CoV-2","TAAGGGTTAAAGTCAC",3,14.61,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V103G F134L",2
"lib2","SARS-CoV-2","TAAGGGTTAGAGTAAC",7,56.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108N I142Q",2
"lib2","SARS-CoV-2","TAAGGGTTCCACACAC",2,9.19,7.12,-3.72,0.48,1.57,1.16,0.06,">1 nonsynonymous","A89N D98L F156V",3
"lib2","SARS-CoV-2","TAAGGTAACGAGAATC",3,60,9.58,-1.26,0.08,2.21,1.08,0,">1 nonsynonymous","Y178E S200Y",2
"lib2","SARS-CoV-2","TAAGGTAATGTCCGCA",2,9.33,8.05,-2.78,0.32,1.89,1.04,0.03,">1 nonsynonymous","F62Q N120P G152S",3
"lib2","SARS-CoV-2","TAAGGTACCACAACGC",8,29.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56N L95K",2
"lib2","SARS-CoV-2","TAAGGTACGATAAAAG",5,89.09,8.34,-2.5,0.1,2.38,1.1,0,">1 nonsynonymous","D59G R73K Y143E",3
"lib2","SARS-CoV-2","TAAGGTACGGGCTCAT",2,6.13,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","L5G I80S",2
"lib2","SARS-CoV-2","TAAGGTACTAAGTCTT",11,166.49,10.71,-0.12,0.03,2.96,1.04,0,">1 nonsynonymous","A67C T201A",2
"lib2","SARS-CoV-2","TAAGGTAGAGTCGATA",3,44.99,10.86,0.02,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGGTAGCTATATCA",10,45.58,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S36M F99S P149S",3
"lib2","SARS-CoV-2","TAAGGTATATAGTGAT",3,14.54,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3D Y21H T55A A89K D98G Y175T",6
"lib2","SARS-CoV-2","TAAGGTATGTGAACTG",9,23.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2L R27T P54T C61T D75H I138W Y143M S184N",8
"lib2","SARS-CoV-2","TAAGGTCACTCCAGAT",4,112.07,9.9,-0.94,0.05,2.18,1.06,0,">1 nonsynonymous","D90V T148R V194I T201N",4
"lib2","SARS-CoV-2","TAAGGTCCGTAACAGT",3,24.72,10.07,-0.77,0.11,2.36,1.04,0,"1 nonsynonymous","A105F",1
"lib2","SARS-CoV-2","TAAGGTCGTACTCAAA",2,51.79,10.61,-0.22,0.05,2.92,1.01,0,">1 nonsynonymous","A14S K56A G155K V173I",4
"lib2","SARS-CoV-2","TAAGGTCTAACACAAT",4,28.88,6.06,-4.78,0.66,1.5,1.08,0.01,">1 nonsynonymous","N130P D137Y G174I",3
"lib2","SARS-CoV-2","TAAGGTCTTCTCTCCA",3,81.09,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S113Y P169M G172E",3
"lib2","SARS-CoV-2","TAAGGTGAATCCACAA",3,88.19,10.53,-0.31,0.04,2.88,1.11,0,"1 nonsynonymous","Y178V",1
"lib2","SARS-CoV-2","TAAGGTGACGACAAAT",10,67.87,6,-4.84,1.14,2.73,1.22,0,">1 nonsynonymous","W23R D68M I88E T148C",4
"lib2","SARS-CoV-2","TAAGGTGTGACTCCGC",5,91.42,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","N64S Y121S R127L V173S",4
"lib2","SARS-CoV-2","TAAGGTTCAACGCATA",6,77.81,10.19,-0.65,0.03,2.95,1.07,0,">1 nonsynonymous","T55L G155D",2
"lib2","SARS-CoV-2","TAAGGTTGCCTTATAC",7,73.48,10.67,-0.17,0.06,2.86,1.14,0,">1 nonsynonymous","R16L R27E P191N",3
"lib2","SARS-CoV-2","TAAGGTTTAGTGGATA",3,28.95,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","C31G V103S Y119L",3
"lib2","SARS-CoV-2","TAAGTAAAAGTTAAAA",7,141.17,10.64,-0.2,0.03,2.96,1.04,0,">1 nonsynonymous","I2T L60A P149G",3
"lib2","SARS-CoV-2","TAAGTAAAATCCACTA",4,136.53,9.47,-1.36,0.03,2.88,1.09,0,">1 nonsynonymous","N1K Y119T K199D",3
"lib2","SARS-CoV-2","TAAGTAAACAGTGGTA",7,0.82,NA,NA,NA,NA,NA,NA,"stop","A14Y K198*",2
"lib2","SARS-CoV-2","TAAGTAAACCAAAGTA",18,180.78,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V37N F47P V65S",3
"lib2","SARS-CoV-2","TAAGTAAAGATTTCAA",7,0,NA,NA,NA,NA,NA,NA,"stop","S29T V77* A81N",3
"lib2","SARS-CoV-2","TAAGTAAAGGACACTA",3,58.95,10.2,-0.64,0.05,2.91,1.03,0,">1 nonsynonymous","Y35T E141R",2
"lib2","SARS-CoV-2","TAAGTAAATAGTGAGT",4,48.97,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","S19G S41L G172M",3
"lib2","SARS-CoV-2","TAAGTAAATGAACCGT",1,19.28,9.85,-0.99,0.1,2.85,1.05,0.01,">1 nonsynonymous","C61V Q84V Y121M",3
"lib2","SARS-CoV-2","TAAGTAAATTAACAGT",12,109.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6G T15A A33Q Y119L F167H",5
"lib2","SARS-CoV-2","TAAGTAAATTACTAAA",2,11.65,6,-4.84,2,3,1.13,0.02,">1 nonsynonymous","C49A V77Y Y121I C158S T201Y",5
"lib2","SARS-CoV-2","TAAGTAAATTTTAGGA",9,237.51,10.36,-0.48,0.02,2.8,1.04,0,">1 nonsynonymous","L5R V37L G51V P197L",4
"lib2","SARS-CoV-2","TAAGTAACAACTCAAG",2,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89E S129C E141P P149R P197V",5
"lib2","SARS-CoV-2","TAAGTAACACACCAAT",7,4.45,NA,NA,NA,NA,NA,NA,"stop","I72N Y93K L122* G155C",4
"lib2","SARS-CoV-2","TAAGTAACCCACATGC",2,95.82,10.62,-0.22,0.04,2.97,1.03,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","TAAGTAACTAAAGAAA",9,30.54,8.99,-1.84,0.18,1.78,1.18,0.01,">1 nonsynonymous","A18T S45L P149E",3
"lib2","SARS-CoV-2","TAAGTAACTAAGATAG",1,6.61,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","N13C Y39H F134P V182L",4
"lib2","SARS-CoV-2","TAAGTAACTTGTTTTG",1,40.11,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F12M D34Q S41M F99Y A105F C158M Y175H",7
"lib2","SARS-CoV-2","TAAGTAACTTTTACCG",1,31.55,9.24,-1.6,0.22,1.5,1.14,0.02,"1 nonsynonymous","W106N",1
"lib2","SARS-CoV-2","TAAGTAAGAGGGCTGT",4,95.43,10.23,-0.6,0.04,2.8,1.05,0,">1 nonsynonymous","T15P L57D",2
"lib2","SARS-CoV-2","TAAGTAAGTAATCAAA",5,0.48,NA,NA,NA,NA,NA,NA,"stop","N118S S129K C150*",3
"lib2","SARS-CoV-2","TAAGTAATAAATTGAT",9,187.45,10.79,-0.05,0.02,2.96,1.05,0,">1 nonsynonymous","L188V T201Q",2
"lib2","SARS-CoV-2","TAAGTAATACCTAAAC",5,45.38,10,-0.84,0.13,2.27,1,0.01,">1 nonsynonymous","I2R F99V",2
"lib2","SARS-CoV-2","TAAGTAATACTCGTAT",7,200.89,10.76,-0.08,0.04,2.95,1.06,0,"1 nonsynonymous","T63I",1
"lib2","SARS-CoV-2","TAAGTAATCACCCGCC",6,169.89,9.36,-1.48,0.03,2.65,1.05,0,">1 nonsynonymous","L5I Y121T",2
"lib2","SARS-CoV-2","TAAGTAATCTTATATC",15,288.5,9.91,-0.93,0.05,2.15,1.08,0,">1 nonsynonymous","R25V V37F",2
"lib2","SARS-CoV-2","TAAGTAATGTCTCCCG",2,3.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68P",1
"lib2","SARS-CoV-2","TAAGTAATTAAGGATT",13,12.87,NA,NA,NA,NA,NA,NA,"stop","F17L S41W Y93* T100*",4
"lib2","SARS-CoV-2","TAAGTACAATCGCAAG",1,13.29,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R25A V71T G83L A89V A192I",5
"lib2","SARS-CoV-2","TAAGTACACCATATTA",1,25.36,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N64L D68A G86D D98I R136V P177Q",6
"lib2","SARS-CoV-2","TAAGTACACTGATTGA",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q R25H F126R",3
"lib2","SARS-CoV-2","TAAGTACAGAGACAAA",3,68.43,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","L95P G146T T201L",3
"lib2","SARS-CoV-2","TAAGTACATGACAATA",3,38.95,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F8N P96R",2
"lib2","SARS-CoV-2","TAAGTACCCTAGCAGT",8,238.09,10.69,-0.14,0.04,2.93,1.07,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","TAAGTACGACATGCGG",11,88.59,10.64,-0.19,0.04,2.93,1.07,0,"1 nonsynonymous","K87R",1
"lib2","SARS-CoV-2","TAAGTACGATAATACG",3,35.19,8.68,-2.16,0.14,2.16,1.09,0.01,">1 nonsynonymous","C61N G117W Y123M",3
"lib2","SARS-CoV-2","TAAGTACGCTGAATAA",1,18.94,7.86,-2.98,0.12,2.02,1.02,0,">1 nonsynonymous","S45Y N109D V173C",3
"lib2","SARS-CoV-2","TAAGTACTAAGTTAGT",6,100.73,10.67,-0.17,0.03,2.91,1.05,0,">1 nonsynonymous","N4P A42N V173M",3
"lib2","SARS-CoV-2","TAAGTACTACCAAAAC",1,15.36,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y39E G74V E141V",3
"lib2","SARS-CoV-2","TAAGTACTAGTCGATA",12,229.9,8.68,-2.16,0.04,3,1.05,0,">1 nonsynonymous","N120D E154V Q168L P197W",4
"lib2","SARS-CoV-2","TAAGTACTCAAGAATG",1,28.02,10.46,-0.37,0.04,3,1.01,0,">1 nonsynonymous","T63L D97V",2
"lib2","SARS-CoV-2","TAAGTACTGATTTTTG",14,128.63,6,-4.84,1.64,1.5,1.18,0.01,">1 nonsynonymous","S53A N92K N120M",3
"lib2","SARS-CoV-2","TAAGTACTGTAGAAAA",2,11.95,9.68,-1.15,0.17,2.18,1.03,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","TAAGTACTGTGCAATT",1,42.94,10.89,0.05,0.09,2.87,1.08,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","TAAGTAGACGACGTTT",1,29.55,9.91,-0.93,0.07,2.82,1.06,0,">1 nonsynonymous","N30V V37K N130R G174D",4
"lib2","SARS-CoV-2","TAAGTAGATATAAATT",5,4.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T I80T I104P S164L",4
"lib2","SARS-CoV-2","TAAGTAGCACATATCA",1,5.99,6.92,-3.92,0.56,1.5,1.1,0.01,">1 nonsynonymous","E10T D68Q N107P V115L Y119L",5
"lib2","SARS-CoV-2","TAAGTAGCACGAACAG",4,38.8,10.14,-0.7,0.09,2.7,1.04,0,">1 nonsynonymous","C6H N151S",2
"lib2","SARS-CoV-2","TAAGTAGGCGTACACG",3,25.41,9.98,-0.85,0.07,2.96,1,0,">1 nonsynonymous","C6S A42S K114T",3
"lib2","SARS-CoV-2","TAAGTAGGGGCATTTA",16,47.35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3N F70T P96K",3
"lib2","SARS-CoV-2","TAAGTAGTACACAGCA",1,22.98,10.8,-0.04,0.09,2.88,1.14,0,">1 nonsynonymous","D97V T148S",2
"lib2","SARS-CoV-2","TAAGTAGTATCGACTA",3,0.62,NA,NA,NA,NA,NA,NA,"stop","D34K Y91R E154* V182P",4
"lib2","SARS-CoV-2","TAAGTATACCACCTGA",1,6.18,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R27E S41I F62L Y165S",4
"lib2","SARS-CoV-2","TAAGTATGAGAACTGA",3,49.39,9.43,-1.4,0.22,1.66,1.06,0.02,">1 nonsynonymous","A14L P54L T100P T201S",4
"lib2","SARS-CoV-2","TAAGTATGCGCCCAAA",11,54.5,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I88K T201L",2
"lib2","SARS-CoV-2","TAAGTATTCACTTCAA",9,198.67,10.16,-0.67,0.05,2.7,1.04,0,">1 nonsynonymous","T3I F44S S200Y",3
"lib2","SARS-CoV-2","TAAGTCAAAAAGATAC",8,48.04,8.3,-2.54,0.21,1.5,1.12,0.02,">1 nonsynonymous","Y35P R73S A105G",3
"lib2","SARS-CoV-2","TAAGTCAAATGTTCTT",3,10.62,6,-4.84,2,3,1.1,0,">1 nonsynonymous","N64C K87H K114S N157I T201V",5
"lib2","SARS-CoV-2","TAAGTCAACATGAGAG",1,10.25,10.8,-0.03,0.25,2.56,1.28,0.01,"1 nonsynonymous","N109R",1
"lib2","SARS-CoV-2","TAAGTCAACCGCGACT",15,273.49,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","E10S S45L T85S P177F",4
"lib2","SARS-CoV-2","TAAGTCAATAGGCGCA",9,43.9,9.81,-1.02,0.1,2.43,1.05,0,">1 nonsynonymous","A81G K128Y F160M V173W",4
"lib2","SARS-CoV-2","TAAGTCACAAATGGTG",3,91.4,8.7,-2.13,0.11,2.24,1.08,0,">1 nonsynonymous","N4K N107L",2
"lib2","SARS-CoV-2","TAAGTCACCTCCGTCT",2,15.42,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","D90Y T100P",2
"lib2","SARS-CoV-2","TAAGTCACTAGATAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","F12* N110S T148I",3
"lib2","SARS-CoV-2","TAAGTCAGGCAGTGCT",5,73.56,6,-4.84,2,3,1.1,0,">1 nonsynonymous","D59R D98C S113L N120S F156E",5
"lib2","SARS-CoV-2","TAAGTCCAAACCTATA",6,66.72,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V20L R25L T85I Y93I",4
"lib2","SARS-CoV-2","TAAGTCCACAAGTTCG",10,138.57,9.83,-1.01,0.07,2.48,1.03,0,">1 nonsynonymous","T85F Y178A",2
"lib2","SARS-CoV-2","TAAGTCCCAAAATAAC",8,47.55,8.63,-2.21,0.13,1.52,1.06,0.01,">1 nonsynonymous","V37K K94L L131M",3
"lib2","SARS-CoV-2","TAAGTCCCACGAGATT",12,29.71,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","N13L R73N A81S N107T",4
"lib2","SARS-CoV-2","TAAGTCCCCTAAATAA",8,106.97,9.04,-1.8,0.07,1.76,1.09,0,">1 nonsynonymous","V37N S45C A81E K128Y",4
"lib2","SARS-CoV-2","TAAGTCCGAGATGACA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14F S139E V153D",3
"lib2","SARS-CoV-2","TAAGTCCGGCTCCCCA",18,207.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23H D90N R124A Y143F",4
"lib2","SARS-CoV-2","TAAGTCCTATTACAAT",5,32.45,9.63,-1.2,0.08,2.07,1.1,0,">1 nonsynonymous","G9R A33L R127S T148L",4
"lib2","SARS-CoV-2","TAAGTCCTTTGCAGAG",2,36.91,6,-4.84,2,3,1.12,0,">1 nonsynonymous","T3C R16N V20M G51S C158N",5
"lib2","SARS-CoV-2","TAAGTCGCAGACAAAC",3,17.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G51V Y93A V103P L122S N151L",5
"lib2","SARS-CoV-2","TAAGTCGCGGTTACAC",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F V37C V182A",3
"lib2","SARS-CoV-2","TAAGTCGCGTTCGCTA",11,108.82,9.79,-1.05,0.09,1.99,1.04,0,">1 nonsynonymous","S43R S69I",2
"lib2","SARS-CoV-2","TAAGTCGGCTTTCAAA",1,16.81,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y39P G51R G83V A89N",4
"lib2","SARS-CoV-2","TAAGTCGTACCATTTC",3,40.21,7.91,-2.93,0.18,2.27,1.13,0.01,"1 nonsynonymous","N171K",1
"lib2","SARS-CoV-2","TAAGTCGTCATCATAT",1,86.35,10.69,-0.15,0.07,2.74,1.09,0,">1 nonsynonymous","T55F D90R",2
"lib2","SARS-CoV-2","TAAGTCTAAATATAAA",3,16.2,10.95,0.11,0.08,3,1.03,0,">1 nonsynonymous","S36T T201Y",2
"lib2","SARS-CoV-2","TAAGTCTAACTATTGG",2,7.81,10.97,0.14,0.08,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGTCTACAATTCGG",5,0.77,NA,NA,NA,NA,NA,NA,"stop","W23* S43R V71R C150Y K198A",5
"lib2","SARS-CoV-2","TAAGTCTCGCACACCA",2,15.78,10.87,0.03,0.06,2.88,1.12,0,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","TAAGTCTGTATAACTA",6,89.27,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C31Q D90W A145S F160W Q176P",5
"lib2","SARS-CoV-2","TAAGTGAAACCCAGAC",8,28.8,8.64,-2.19,0.31,1.5,1.07,0.05,">1 nonsynonymous","F47G G83L",2
"lib2","SARS-CoV-2","TAAGTGAACAATGTAG",1,18.85,6.17,-4.67,0.48,3,1.18,0.01,">1 nonsynonymous","Y35S S45P Y123G",3
"lib2","SARS-CoV-2","TAAGTGAATATCCAGG",5,86.78,10.59,-0.24,0.06,2.87,1.1,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","TAAGTGAATCAAATTA",1,3.34,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80Q",1
"lib2","SARS-CoV-2","TAAGTGAGAAAATTTT",2,90.59,10.63,-0.2,0.06,2.93,1.07,0,">1 nonsynonymous","N130L S139A",2
"lib2","SARS-CoV-2","TAAGTGAGAATTCGAC",6,12.65,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N120R V182E",2
"lib2","SARS-CoV-2","TAAGTGAGCACACGCT",8,92.06,10.92,0.08,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGTGAGCCTTGTCA",4,51.74,10.24,-0.6,0.04,3,1.02,0,">1 nonsynonymous","N110L A145E",2
"lib2","SARS-CoV-2","TAAGTGAGTACCCGGA",8,40.9,9.84,-1,0.09,2.11,1.11,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","TAAGTGAGTGAGCACA",3,26.66,6,-4.84,0.87,2.5,1.07,0,">1 nonsynonymous","I2Y F8C V37D T46N D68M D98W F134L",7
"lib2","SARS-CoV-2","TAAGTGATATACATAA",3,46.06,10.77,-0.06,0.05,2.86,1.17,0,"1 nonsynonymous","K26I",1
"lib2","SARS-CoV-2","TAAGTGATATTACTGG",2,99.8,10.72,-0.11,0.03,2.96,1.05,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","TAAGTGATTTAGTGCA",2,52.24,10.85,0.02,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGTGCACGGTTAAT",2,0.4,NA,NA,NA,NA,NA,NA,"stop","I88A K128* K132S",3
"lib2","SARS-CoV-2","TAAGTGCCGAATAGAT",8,61.93,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","I2N R127P",2
"lib2","SARS-CoV-2","TAAGTGCGAGTACCTA",1,8.14,10.45,-0.39,0.13,2.84,1.04,0,">1 nonsynonymous","V37A L60Q D98F",3
"lib2","SARS-CoV-2","TAAGTGCTAACTCCGG",3,20.07,10.85,0.01,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAAGTGCTGACTCACA",17,112.75,6,-4.84,1.33,1.5,1.18,0.02,">1 nonsynonymous","K56R I88H",2
"lib2","SARS-CoV-2","TAAGTGCTTGATAACG",4,0.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","TAAGTGGAAATATATA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15G S19L I138*",3
"lib2","SARS-CoV-2","TAAGTGGAAGGTGCAA",1,19.31,8.19,-2.65,0.17,2.17,1.04,0.02,">1 nonsynonymous","S45N A81E P169V Y178T",4
"lib2","SARS-CoV-2","TAAGTGGTAATGCAAA",4,0.66,NA,NA,NA,NA,NA,NA,"stop","E10* T15G",2
"lib2","SARS-CoV-2","TAAGTGGTGGTAGATA",2,45.56,10.45,-0.38,0.06,2.94,1.06,0,">1 nonsynonymous","T55D R136S",2
"lib2","SARS-CoV-2","TAAGTGGTTAGAGAGT",11,93.85,9.94,-0.9,0.07,2.33,1.07,0,">1 nonsynonymous","N4M S43R L57D N64S T201L",5
"lib2","SARS-CoV-2","TAAGTGTAAACAGACA",1,20.84,10.87,0.03,0.05,2.83,1.14,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","TAAGTGTAAGGAGCAT",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47W C61K R78T W106R Y119S G155R",6
"lib2","SARS-CoV-2","TAAGTGTATGAACAGA",21,116.02,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S41I I80K K128V",3
"lib2","SARS-CoV-2","TAAGTGTGAACATGTA",4,9.94,8.62,-2.22,0.21,1.58,1,0.02,">1 nonsynonymous","Y123W P161T",2
"lib2","SARS-CoV-2","TAAGTGTTTTTCAAAA",7,63.42,7.32,-3.51,0.22,1.5,1.16,0.01,">1 nonsynonymous","F8L Y21R T100R",3
"lib2","SARS-CoV-2","TAAGTTAAACTCGTTT",1,8.94,10.75,-0.09,0.09,3,1.05,0,">1 nonsynonymous","N120S T140N",2
"lib2","SARS-CoV-2","TAAGTTAAATGAAAAA",7,5.83,NA,NA,NA,NA,NA,NA,"stop","V77E S113* Q168R",3
"lib2","SARS-CoV-2","TAAGTTAATAATAAAA",1,25.34,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","T3P L60R N107L Y121K",4
"lib2","SARS-CoV-2","TAAGTTAATCTAACGG",1,0.36,NA,NA,NA,NA,NA,NA,"stop","P169* R179K",2
"lib2","SARS-CoV-2","TAAGTTACATCAAGAC",2,28.2,7.65,-3.19,0.2,1.5,1.14,0.02,">1 nonsynonymous","P161H K198G",2
"lib2","SARS-CoV-2","TAAGTTACCCCACCCG",2,63.83,8.53,-2.3,0.1,2.48,1.08,0,">1 nonsynonymous","E10K A33P G166L",3
"lib2","SARS-CoV-2","TAAGTTACGATTTACC",5,2.85,NA,NA,NA,NA,NA,NA,"stop","N13* F44T Q176H",3
"lib2","SARS-CoV-2","TAAGTTACTAATTGCA",3,11.83,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","I28E T46Y A67F D112R Q144P",5
"lib2","SARS-CoV-2","TAAGTTAGAAAATAAA",9,89.38,9.73,-1.11,0.05,2.76,1.03,0,">1 nonsynonymous","D97I P133S G174K",3
"lib2","SARS-CoV-2","TAAGTTAGAACAGTAC",3,15.62,10.63,-0.21,0.1,2.86,1.06,0,">1 nonsynonymous","F47V T63N",2
"lib2","SARS-CoV-2","TAAGTTAGAACATAAA",8,64.32,8.89,-1.94,0.11,1.5,1.1,0.01,">1 nonsynonymous","F8K E141L K198D",3
"lib2","SARS-CoV-2","TAAGTTAGTTGCACCT",10,86.05,7.28,-3.56,0.22,1.5,1.13,0.01,">1 nonsynonymous","Y121L D137M",2
"lib2","SARS-CoV-2","TAAGTTATATAACCGT",5,2.21,NA,NA,NA,NA,NA,NA,"stop","C6* Y35R",2
"lib2","SARS-CoV-2","TAAGTTATTGTATCGT",2,11.41,6.31,-4.53,0.42,2.1,1.11,0.01,">1 nonsynonymous","S45P C61D A89L",3
"lib2","SARS-CoV-2","TAAGTTCACTCAACTA",7,54.33,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R136V C158T",2
"lib2","SARS-CoV-2","TAAGTTCATATTGTGT",8,167.45,9.96,-0.87,0.07,2.53,1.06,0,"1 nonsynonymous","V11A",1
"lib2","SARS-CoV-2","TAAGTTCCACTGGACA",11,46.15,7.92,-2.91,0.35,1.5,1.3,0.03,">1 nonsynonymous","C6V S45R V181L",3
"lib2","SARS-CoV-2","TAAGTTCCCGGAATTT",3,0,NA,NA,NA,NA,NA,NA,"stop","N1I E10* A18V Y21R S53E N130L G152R",7
"lib2","SARS-CoV-2","TAAGTTCCTCCCCACA",2,2.39,NA,NA,NA,NA,NA,NA,"stop","A14E K87A W106Q N151K P197*",5
"lib2","SARS-CoV-2","TAAGTTCGACTTCTAA",11,60.59,8.87,-1.96,0.19,1.5,1.05,0.02,">1 nonsynonymous","W106C K128A E186S",3
"lib2","SARS-CoV-2","TAAGTTCGCTCTGGCA",11,139.77,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D34Q F62G D68Q E135R",4
"lib2","SARS-CoV-2","TAAGTTGACAAACTTT",3,40.99,10.19,-0.64,0.04,2.92,1.03,0,"1 nonsynonymous","C31V",1
"lib2","SARS-CoV-2","TAAGTTGACGCTTATG",4,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I K87N G101W L122H",4
"lib2","SARS-CoV-2","TAAGTTGAGTAGCGAT",10,3.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103A N120H G146W",3
"lib2","SARS-CoV-2","TAAGTTGCCGTGCTAC",7,112.43,10.21,-0.63,0.05,2.91,1.08,0,">1 nonsynonymous","D97S E154C",2
"lib2","SARS-CoV-2","TAAGTTGTCAGGAGTA",18,1.97,NA,NA,NA,NA,NA,NA,"stop","L5* Q84L",2
"lib2","SARS-CoV-2","TAAGTTTAAATGTAAA",4,104.1,10.22,-0.61,0.05,2.82,1.04,0,">1 nonsynonymous","L5Y L60D L131V",3
"lib2","SARS-CoV-2","TAAGTTTACAAACGCC",3,32.65,6.08,-4.76,1.22,1.5,1.3,0.03,">1 nonsynonymous","Q84R P96L",2
"lib2","SARS-CoV-2","TAAGTTTATCTTGGAC",3,24.58,10.73,-0.11,0.08,2.89,1.11,0,"1 nonsynonymous","S45N",1
"lib2","SARS-CoV-2","TAAGTTTATTAACATA",1,16.54,9.44,-1.4,0.2,2,1.06,0.03,">1 nonsynonymous","T15G D75V",2
"lib2","SARS-CoV-2","TAAGTTTCAAGCTCAA",2,15.67,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C102Q T140N",2
"lib2","SARS-CoV-2","TAAGTTTCAGTAGATA",9,65.29,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y93L D112V Y123F Q144R G155R",5
"lib2","SARS-CoV-2","TAAGTTTCCTTAAAGG",5,16.5,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K87D N92K",2
"lib2","SARS-CoV-2","TAAGTTTTACACAAAT",10,102.25,10.66,-0.17,0.04,2.94,1.02,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","TAAGTTTTACTGTTAC",1,11.01,10.9,0.07,0.5,2.07,1.01,0.06,"1 nonsynonymous","F47M",1
"lib2","SARS-CoV-2","TAAGTTTTCAACCAGC",2,7.62,9.53,-1.3,0.21,2.37,1.16,0.01,">1 nonsynonymous","F44L A81S F156V",3
"lib2","SARS-CoV-2","TAAGTTTTTCCAGTCA",2,16.73,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Y35A A67Y C102L",3
"lib2","SARS-CoV-2","TAATAAAAACCCTTAA",7,69.6,10.9,0.06,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAAAACGAAATG",1,78.29,10.8,-0.03,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAAAACGCGCTT",1,52.19,10.39,-0.45,0.06,2.99,1,0,">1 nonsynonymous","I104T K198R",2
"lib2","SARS-CoV-2","TAATAAAAATCTCAGT",5,66.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44L D68L G86M Y119L P197F",5
"lib2","SARS-CoV-2","TAATAAAAATGCGTCT",28,393.26,9.69,-1.15,0.04,2.83,1.05,0,">1 nonsynonymous","K128L Y143L",2
"lib2","SARS-CoV-2","TAATAAAACAAGGATA",2,13.04,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G51V D97N A105L L183F",4
"lib2","SARS-CoV-2","TAATAAAACACTAGTA",14,127.14,7.61,-3.22,0.18,1.5,1.11,0.01,">1 nonsynonymous","Y35A K56E K87E D98L P149T",5
"lib2","SARS-CoV-2","TAATAAAACCCCATGA",15,222.17,10.75,-0.09,0.03,2.93,1.08,0,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","TAATAAAACCGAATAT",4,9.43,9.47,-1.37,0.17,2.21,1.06,0.02,"1 nonsynonymous","L38K",1
"lib2","SARS-CoV-2","TAATAAAACCTAACAC",21,142.88,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5V C31T W106P P149Y Y175A",5
"lib2","SARS-CoV-2","TAATAAAACTTCCAAG",5,22.15,8.44,-2.4,0.23,1.5,1.14,0.04,">1 nonsynonymous","N13S P96R",2
"lib2","SARS-CoV-2","TAATAAAAGAAAATAA",4,47.47,10.71,-0.13,0.04,2.96,1.06,0,"1 nonsynonymous","T140Y",1
"lib2","SARS-CoV-2","TAATAAAATAACTTAT",3,17.22,10.98,0.15,0.13,2.82,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAAATATTGTAG",1,20.33,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","I88M N92T A105L P149L",4
"lib2","SARS-CoV-2","TAATAAAATGCTGAAG",5,38.27,10.86,0.03,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAAATTCATATA",1,19.18,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L60M L95W Q176W",3
"lib2","SARS-CoV-2","TAATAAAATTCTTGAA",10,3.08,NA,NA,NA,NA,NA,NA,"stop","N58* V103H",2
"lib2","SARS-CoV-2","TAATAAACAATCCATG",1,14.48,6.42,-4.42,0.34,3,1.3,0.02,">1 nonsynonymous","D90H L95M P96A L125W",4
"lib2","SARS-CoV-2","TAATAAACCCGCCGTT",1,6.32,6,-4.84,2,3,1.1,0,">1 nonsynonymous","D68E A89Y K94T N120S G146S",5
"lib2","SARS-CoV-2","TAATAAACGATTATGC",3,51.89,10.94,0.1,0.08,2.89,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAACGTTCCCCA",4,62.5,10.82,-0.01,0.05,2.88,1.12,0,"1 nonsynonymous","S43D",1
"lib2","SARS-CoV-2","TAATAAACTAGGTCCT",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M L95T G101Y",3
"lib2","SARS-CoV-2","TAATAAAGAAGTTTCA",8,176.05,10.26,-0.57,0.04,2.87,1.03,0,"1 nonsynonymous","N13M",1
"lib2","SARS-CoV-2","TAATAAAGCTGGAAAT",11,292.43,10.24,-0.59,0.04,2.8,1.1,0,"1 nonsynonymous","Y35Q",1
"lib2","SARS-CoV-2","TAATAAAGGATACCGT",7,64.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14N G86A N107Y",3
"lib2","SARS-CoV-2","TAATAAATAAACTATA",2,73.98,10.61,-0.22,0.03,2.94,1.06,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","TAATAAATACTCACAA",8,34.38,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F8T S129F N171K",3
"lib2","SARS-CoV-2","TAATAAATCACCACAT",1,59.44,10.44,-0.39,0.05,2.9,1.07,0,">1 nonsynonymous","P96A T148I K198M",3
"lib2","SARS-CoV-2","TAATAAATCCTGTCCT",2,11.7,10.84,0.01,0.09,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAATCGAGTCTT",3,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69P T100K N107V",3
"lib2","SARS-CoV-2","TAATAAATGGTTGAAG",18,99.52,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","L57C T63C F167T G174P V181L",5
"lib2","SARS-CoV-2","TAATAAATTAACCTGC",6,157.23,10.8,-0.04,0.04,2.84,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAAATTAATTGAC",2,0.73,NA,NA,NA,NA,NA,NA,"stop","N1R C6* V173G",3
"lib2","SARS-CoV-2","TAATAAATTACGTAGG",2,8.35,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","A81F R124P N151I",3
"lib2","SARS-CoV-2","TAATAACAAGAACATA",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Y F160V",2
"lib2","SARS-CoV-2","TAATAACAATAAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","T100* Q176I",2
"lib2","SARS-CoV-2","TAATAACAATGTCATC",2,14.21,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61S G86N P161H",3
"lib2","SARS-CoV-2","TAATAACACAGTTTCT",1,15.97,10.94,0.11,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAACACCATATAG",3,58.9,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","I2G F12C C150Y",3
"lib2","SARS-CoV-2","TAATAACAGACCTTTG",1,2.36,NA,NA,NA,NA,NA,NA,"stop","G51F C61* F99V D112I Y119A S139T V181S",7
"lib2","SARS-CoV-2","TAATAACAGATATACC",1,4.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66H L95P F134V",3
"lib2","SARS-CoV-2","TAATAACATTCACTCG",3,1520.97,10.46,-0.37,0.03,2.93,1.01,0,">1 nonsynonymous","P96S K199N",2
"lib2","SARS-CoV-2","TAATAACATTTGAGGA",2,14.26,10.76,-0.08,0.15,2.91,1,0.01,">1 nonsynonymous","N1S P7A A33L V173L",4
"lib2","SARS-CoV-2","TAATAACCAATTACTA",3,36.67,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y50P F126T V153T",3
"lib2","SARS-CoV-2","TAATAACCACAATCAT",5,80.62,10.65,-0.19,0.04,2.81,1.1,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","TAATAACCACTGATCA",8,51.71,9.11,-1.72,0.07,2.61,1.04,0,">1 nonsynonymous","R127S Q168M",2
"lib2","SARS-CoV-2","TAATAACCAGGGGTAA",2,3.73,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAATAACCATCATTAT",3,95.4,10.58,-0.25,0.05,2.91,1.09,0,">1 nonsynonymous","F8L L57F",2
"lib2","SARS-CoV-2","TAATAACCGAAATAAC",6,175.19,10.76,-0.07,0.04,2.93,1.08,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TAATAACCGGGATTCA",7,22.51,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49T N107A D112L R136M Q176L P191I",6
"lib2","SARS-CoV-2","TAATAACCTCAACTGG",2,27.41,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","R25T Y35V T46P N64I D90M F99N L122N C150D",8
"lib2","SARS-CoV-2","TAATAACCTCTCGATA",3,25.94,7.35,-3.49,0.46,1.5,1.04,0.07,">1 nonsynonymous","T3F C61S I72P N120L F134S",5
"lib2","SARS-CoV-2","TAATAACCTGCCGGGT",10,94.06,10.77,-0.07,0.06,2.92,1.08,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","TAATAACCTTAATTTT",4,13.82,6.25,-4.59,1.06,1.5,1.27,0.04,">1 nonsynonymous","V77A G152V",2
"lib2","SARS-CoV-2","TAATAACGACGACATT",1,6.11,10.54,-0.3,0.05,3,1,0,"1 nonsynonymous","Y35G",1
"lib2","SARS-CoV-2","TAATAACGACTAACTC",5,93.29,10.24,-0.6,0.06,2.71,1.01,0,">1 nonsynonymous","P96K S200G",2
"lib2","SARS-CoV-2","TAATAACGTAGCAAAC",6,127.24,10.89,0.06,0.03,2.82,1.18,0,">1 nonsynonymous","R16K K128L P197L",3
"lib2","SARS-CoV-2","TAATAACGTTGAACAA",8,69.38,10.81,-0.03,0.04,2.99,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATAACTAAACGATA",7,182.5,10.88,0.05,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAACTAAGCAGAG",5,37.72,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I88V F99S S129A",3
"lib2","SARS-CoV-2","TAATAACTAATAATAG",3,25.68,7.32,-3.52,0.26,2.18,1.2,0.02,">1 nonsynonymous","N1S N40R K87N L125D P149S",5
"lib2","SARS-CoV-2","TAATAACTCGTTAACG",7,63.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12D V37A F99L",3
"lib2","SARS-CoV-2","TAATAACTTGACCATA",15,158,10.81,-0.02,0.05,2.96,1.07,0,">1 nonsynonymous","Y35L K48R",2
"lib2","SARS-CoV-2","TAATAACTTTACGAAG",4,119.41,10.82,-0.01,0.05,2.92,1.08,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TAATAAGCAATAAAGG",7,27.04,8.28,-2.56,0.13,1.94,1.1,0.01,">1 nonsynonymous","T55Y D97H V115M I138Y P149T F160T",6
"lib2","SARS-CoV-2","TAATAAGCACCCACGA",2,29.93,10.72,-0.12,0.05,2.91,1.08,0,"1 nonsynonymous","P191N",1
"lib2","SARS-CoV-2","TAATAAGCAGCTTTAT",5,156.3,10.39,-0.45,0.05,2.72,1.03,0,">1 nonsynonymous","E10G Q84I N171T",3
"lib2","SARS-CoV-2","TAATAAGGAACGCGTA",2,41.23,9.4,-1.43,0.09,1.97,1.08,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TAATAAGGTGAGTATT",1,51.96,9.02,-1.81,0.13,1.68,1.1,0.01,">1 nonsynonymous","N40C N58E G152C",3
"lib2","SARS-CoV-2","TAATAAGTACTTTTAA",3,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E A145C G166V",3
"lib2","SARS-CoV-2","TAATAAGTATCTCCAT",9,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18P C102D",2
"lib2","SARS-CoV-2","TAATAAGTGAGCGTTT",5,43.26,10.68,-0.15,0.05,2.87,1.13,0,"1 nonsynonymous","L122Y",1
"lib2","SARS-CoV-2","TAATAAGTTACGACAC",3,18.81,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","Y35I G86Y Y175A",3
"lib2","SARS-CoV-2","TAATAATAAACTAATT",7,123.69,10.4,-0.44,0.04,2.96,1.03,0,">1 nonsynonymous","L5P L57M K87F G196W",4
"lib2","SARS-CoV-2","TAATAATAAGTAAGAT",5,14.64,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Q168T V182P",2
"lib2","SARS-CoV-2","TAATAATAAGTCCGCC",1,32.26,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y93T T148N",2
"lib2","SARS-CoV-2","TAATAATAAGTTGTCT",1,80.61,10.83,0,0.04,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAATAATCAACTG",1,40.18,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T63G R124P",2
"lib2","SARS-CoV-2","TAATAATAATTGTAGA",3,48.85,10.81,-0.02,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAATACATTTTTA",12,147.45,10.02,-0.82,0.03,2.8,1.04,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","TAATAATAGAAGCACT",6,0.02,NA,NA,NA,NA,NA,NA,"stop","T85S V181*",2
"lib2","SARS-CoV-2","TAATAATAGAGACCGA",18,195.74,9.84,-1,0.06,2.58,1.03,0,">1 nonsynonymous","S45K S129V Q144G",3
"lib2","SARS-CoV-2","TAATAATAGCAATAGG",4,13.64,8.82,-2.02,0.19,2.74,1.03,0.01,">1 nonsynonymous","A14S Y119L",2
"lib2","SARS-CoV-2","TAATAATATTGAGAAG",4,45.87,10.94,0.1,0.05,2.94,1.08,0,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","TAATAATCAACGCTTG",11,10.39,NA,NA,NA,NA,NA,NA,"stop","D59* L131M P197S",3
"lib2","SARS-CoV-2","TAATAATCAGGACTAT",5,40.02,8.26,-2.58,0.18,1.5,1.07,0.01,">1 nonsynonymous","F62I R124S N130K",3
"lib2","SARS-CoV-2","TAATAATCCTGGGCCA",3,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N F47N Y123K",3
"lib2","SARS-CoV-2","TAATAATCGAATTAAA",15,305.51,10.19,-0.64,0.04,2.77,1.02,0,">1 nonsynonymous","Y35M W106L",2
"lib2","SARS-CoV-2","TAATAATCTACAGATT",13,95.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9W G83C G101F E135R",4
"lib2","SARS-CoV-2","TAATAATCTACCTCAT",1,18.46,10.29,-0.55,0.19,2.78,1.03,0.03,">1 nonsynonymous","T46D N58M",2
"lib2","SARS-CoV-2","TAATAATGACATCGTT",1,8.52,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","F44I L95K",2
"lib2","SARS-CoV-2","TAATAATGAGATTATG",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F K132Q T170S",3
"lib2","SARS-CoV-2","TAATAATGGATACTAT",1,31.22,10.8,-0.03,0.05,3,1.01,0,">1 nonsynonymous","G9R P197A",2
"lib2","SARS-CoV-2","TAATAATGTAACGGAG",2,44.88,10.84,0.01,0.03,2.95,1.06,0,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","TAATAATTACGAGACA",5,64.18,6,-4.84,2,3,1.08,0,">1 nonsynonymous","D59K G86T D137T",3
"lib2","SARS-CoV-2","TAATAATTCGAACCAG",1,21.82,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V77A D112F L122V A190K",4
"lib2","SARS-CoV-2","TAATAATTCGGAGATC",2,3.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L F99V W106F Y119C I138Y V173L",6
"lib2","SARS-CoV-2","TAATACAAAACAGTGC",6,6.03,NA,NA,NA,NA,NA,NA,"stop","V77K T170* G174V",3
"lib2","SARS-CoV-2","TAATACAAACTCAAGT",1,15.75,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G51M C61G S113Y",3
"lib2","SARS-CoV-2","TAATACAAAGCACGCG",2,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20R D97G",2
"lib2","SARS-CoV-2","TAATACAAAGGACATG",2,67.95,9.95,-0.88,0.07,2.71,1.04,0,">1 nonsynonymous","A33S F44D I142L",3
"lib2","SARS-CoV-2","TAATACAAATTAGAGA",4,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38T D59H A81S D90K N110I E141N E186F",7
"lib2","SARS-CoV-2","TAATACAACTACACTG",14,254.13,9.39,-1.45,0.03,2.94,1.07,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TAATACAAGCACGTCT",2,5.04,10.73,-0.1,0.09,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATACAATACACCAT",2,7.71,8.45,-2.38,0.21,3,1.04,0.02,">1 nonsynonymous","C61G N110Q G117L",3
"lib2","SARS-CoV-2","TAATACAATGAGGGAG",6,24.05,8.59,-2.24,0.1,2.47,1.1,0,">1 nonsynonymous","T55S K87A P96A A145E",4
"lib2","SARS-CoV-2","TAATACAATGCGTCAA",7,168.53,8.73,-2.11,0.07,2.97,1.07,0,"1 nonsynonymous","N157E",1
"lib2","SARS-CoV-2","TAATACAATTGTCCTG",9,69.05,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A22V R25Q K56L E76D Q84Y",5
"lib2","SARS-CoV-2","TAATACAATTTAGAAA",13,148.44,10.24,-0.59,0.05,2.7,1.05,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","TAATACACAAAACTCA",1,32,10.26,-0.57,0.06,2.89,1,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","TAATACACACAGCCAG",3,14.19,10.53,-0.31,0.56,1.67,1,0.07,">1 nonsynonymous","Y91Q P133G",2
"lib2","SARS-CoV-2","TAATACACCACTCTAA",2,36.52,10.52,-0.31,0.06,2.95,1.1,0,">1 nonsynonymous","I2T F44L",2
"lib2","SARS-CoV-2","TAATACACGTAAAGAC",16,150.06,9.96,-0.88,0.12,2.39,1.09,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","TAATACAGATATATGA",6,90.2,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D97W Y119V Y143W Y175C H189N",5
"lib2","SARS-CoV-2","TAATACAGCAGGTGAA",3,33.88,9.65,-1.18,0.16,1.67,1.14,0.02,">1 nonsynonymous","F99W V103M",2
"lib2","SARS-CoV-2","TAATACAGCTTTTACG",2,32.63,9.6,-1.23,0.1,2.61,1,0.01,">1 nonsynonymous","D90C V173P",2
"lib2","SARS-CoV-2","TAATACAGGGACAACC",3,0.19,NA,NA,NA,NA,NA,NA,"stop","S36F S41E F47* N92C W106V V115G",6
"lib2","SARS-CoV-2","TAATACAGTAGAAAGT",3,50.73,10.32,-0.52,0.07,2.67,1.07,0,">1 nonsynonymous","N24F V153L",2
"lib2","SARS-CoV-2","TAATACAGTGACGTCT",1,23.55,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","V11N A81D G146E P149S",4
"lib2","SARS-CoV-2","TAATACATAAAAAGAT",1,0.27,NA,NA,NA,NA,NA,NA,"stop","T63* Y119N A190N",3
"lib2","SARS-CoV-2","TAATACATAAAGAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107P N120K Y143L Q163E",4
"lib2","SARS-CoV-2","TAATACATCAAACTAT",1,2.26,NA,NA,NA,NA,NA,NA,"stop","N4Y E76* G86F Y93R Y123L L183F",6
"lib2","SARS-CoV-2","TAATACATCTAGAGGG",4,27.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95T V103S W106M P149I",4
"lib2","SARS-CoV-2","TAATACATCTATGACA",5,15.85,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","T3D I88C P169Y",3
"lib2","SARS-CoV-2","TAATACCAAAGGCTGA",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W P82A F99C Q144S Q168N",5
"lib2","SARS-CoV-2","TAATACCAAGATCTTT",6,0.12,NA,NA,NA,NA,NA,NA,"stop","C61* C102Y",2
"lib2","SARS-CoV-2","TAATACCAATAGACAA",5,135.06,8.42,-2.42,0.11,2.75,1.1,0,">1 nonsynonymous","Q168E Q176L",2
"lib2","SARS-CoV-2","TAATACCAATATCTAG",3,32.47,10.18,-0.65,0.07,2.9,1.08,0,">1 nonsynonymous","C61H A81Q D98S",3
"lib2","SARS-CoV-2","TAATACCAGCGGAATT",9,50.98,7.95,-2.89,0.16,1.81,1.11,0.01,">1 nonsynonymous","C61E D112Y",2
"lib2","SARS-CoV-2","TAATACCATCCAACAA",10,93.98,6,-4.84,1.32,1.5,1.17,0.01,">1 nonsynonymous","S36V F44N L60E S113I",4
"lib2","SARS-CoV-2","TAATACCCAGATATTG",5,85.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7F V37C R73L F99Y",4
"lib2","SARS-CoV-2","TAATACCCATTTACAC",2,5.57,10.91,0.07,0.08,2.85,1.16,0,">1 nonsynonymous","P54F T85H",2
"lib2","SARS-CoV-2","TAATACCCTTTTGTTA",5,49.85,8.52,-2.31,0.12,1.87,1.05,0,">1 nonsynonymous","T15K G51Y G166S",3
"lib2","SARS-CoV-2","TAATACCGCGTTCTTA",2,168.69,10.62,-0.22,0.04,2.94,1.06,0,">1 nonsynonymous","L122K K128P G146D",3
"lib2","SARS-CoV-2","TAATACCTGAATGCTA",3,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S P82N P96N S108K F160I",5
"lib2","SARS-CoV-2","TAATACCTGTCTCACC",19,260.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I2Y G9L G86D N120F P177T V182M",6
"lib2","SARS-CoV-2","TAATACGAAAACCACC",4,58,9.66,-1.17,0.11,2.16,1,0,">1 nonsynonymous","N1E A105H",2
"lib2","SARS-CoV-2","TAATACGAAATCCAAA",10,45.21,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L38I G51E G101E K128N",4
"lib2","SARS-CoV-2","TAATACGACATATAAA",14,52.03,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19K F44S N107T",3
"lib2","SARS-CoV-2","TAATACGATAGACTAT",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59T C150Y",2
"lib2","SARS-CoV-2","TAATACGATAGATCAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S C61L D75Y T100P",4
"lib2","SARS-CoV-2","TAATACGGACGTACAA",7,49.47,6.21,-4.63,0.61,1.5,1.19,0.02,">1 nonsynonymous","R124K G155Y Q168S",3
"lib2","SARS-CoV-2","TAATACGGAGTAAGGA",8,28.29,6.28,-4.55,0.85,1.5,1.17,0.04,">1 nonsynonymous","P96Y V182C",2
"lib2","SARS-CoV-2","TAATACGTAATCCCAT",3,32.44,8.64,-2.2,0.31,1.5,1,0.07,">1 nonsynonymous","F17M S45F D98Q G116R P197C",5
"lib2","SARS-CoV-2","TAATACGTACAAAATT",14,86.15,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C31T Y50C C61F E76T K87G G146H",6
"lib2","SARS-CoV-2","TAATACGTCTATTACA",2,53.04,9.1,-1.74,0.08,2.9,1.11,0,"1 nonsynonymous","G166W",1
"lib2","SARS-CoV-2","TAATACGTGGTTAACT",5,269.16,10.64,-0.19,0.03,2.94,1.07,0,"1 nonsynonymous","G51H",1
"lib2","SARS-CoV-2","TAATACTAAGGAATTG",5,0.32,NA,NA,NA,NA,NA,NA,"stop","T15Q V20Y C61* D90N I104D N120Y T201Q",7
"lib2","SARS-CoV-2","TAATACTACAACGAAT",4,125.37,10.72,-0.12,0.04,2.9,1.12,0,">1 nonsynonymous","T3H G196Q",2
"lib2","SARS-CoV-2","TAATACTAGCCGTAAT",7,74.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V32T S41W V115H V180P",4
"lib2","SARS-CoV-2","TAATACTAGCCTTGTG",4,28.96,6,-4.84,0.56,3,1.13,0.01,"1 nonsynonymous","K94W",1
"lib2","SARS-CoV-2","TAATACTAGTAGTATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A Y119R F185T",3
"lib2","SARS-CoV-2","TAATACTATGATTCTA",1,27.96,7.5,-3.34,0.38,1.56,1.1,0.05,">1 nonsynonymous","G9A N58D A81D K114P G152M F156W",6
"lib2","SARS-CoV-2","TAATACTATTACGTAC",8,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27S Y39A K94R I138D Q163L",5
"lib2","SARS-CoV-2","TAATACTCGCGTCAAC",4,31.08,6.31,-4.52,0.84,1.5,1.2,0.03,">1 nonsynonymous","V71E Y91G S129C P149K",4
"lib2","SARS-CoV-2","TAATACTGTTTTCCAG",3,18.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D98T L162G",2
"lib2","SARS-CoV-2","TAATACTTCTCGTAAT",5,84.72,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S41R S139C V180F A192S",4
"lib2","SARS-CoV-2","TAATACTTTGTGTTTA",7,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H N13G C158G",3
"lib2","SARS-CoV-2","TAATAGAAAATCGATG",4,56.15,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2S F44S G83S Y121L G146W",5
"lib2","SARS-CoV-2","TAATAGAAACAGCTTA",4,40.3,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L38P A67C D90L F99L P133I P197L",6
"lib2","SARS-CoV-2","TAATAGAACCATTGAT",6,50.72,10.85,0.01,0.11,2.62,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAGAAGAAGTGTG",4,1.27,NA,NA,NA,NA,NA,NA,"stop","Q84T Y93T V103*",3
"lib2","SARS-CoV-2","TAATAGACAAAAATTA",1,12.14,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","P7G G86C G155T",3
"lib2","SARS-CoV-2","TAATAGACATAGTAAC",3,90.71,10.26,-0.58,0.06,2.67,1.09,0,">1 nonsynonymous","I2S K94Y P197W",3
"lib2","SARS-CoV-2","TAATAGACTAGTAATC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122V P149L",2
"lib2","SARS-CoV-2","TAATAGACTAGTACCG",6,166.9,10.04,-0.79,0.07,2.29,1.03,0,"1 nonsynonymous","S69H",1
"lib2","SARS-CoV-2","TAATAGATAAAGTCTT",4,34.33,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K87I W106R G155Y Q168P",4
"lib2","SARS-CoV-2","TAATAGATAGACTCCC",2,37.94,10.77,-0.06,0.09,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAGATTAGTCAGA",8,51.27,10.93,0.09,0.06,2.96,1.07,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","TAATAGATTTTATATA",2,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43F D90I A105Q",3
"lib2","SARS-CoV-2","TAATAGATTTTGAAAA",3,26.92,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y35D I88F C102R G152I T201G",5
"lib2","SARS-CoV-2","TAATAGCACAGTTTAC",6,1.84,NA,NA,NA,NA,NA,NA,"stop","S29T S41F S45N C61G P82G K87N S139C P197*",8
"lib2","SARS-CoV-2","TAATAGCACATGTCCA",7,64.41,10.75,-0.08,0.07,2.9,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATAGCAGAGAATCG",2,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R C158R G172M",3
"lib2","SARS-CoV-2","TAATAGCATAACATCG",4,0.91,NA,NA,NA,NA,NA,NA,"stop","S19R S36L K94* E141I P177F",5
"lib2","SARS-CoV-2","TAATAGCATCTCAGAT",6,52.64,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7T E10G Y121K F185D",4
"lib2","SARS-CoV-2","TAATAGGAAATAAAGC",4,120.37,8.46,-2.37,0.09,2.08,1.06,0,">1 nonsynonymous","Q84R Q176C",2
"lib2","SARS-CoV-2","TAATAGGAATTCTTAA",6,28.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28P S36R V103G L125Q Q168C",5
"lib2","SARS-CoV-2","TAATAGGACACTCCCT",1,0.4,NA,NA,NA,NA,NA,NA,"stop","K94L W106L S113K Q176*",4
"lib2","SARS-CoV-2","TAATAGGCAATACACC",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1H G101D F167L",3
"lib2","SARS-CoV-2","TAATAGGCACATAAAA",10,60.72,7.77,-3.07,0.16,1.64,1.09,0.01,">1 nonsynonymous","W106R G117S F126M",3
"lib2","SARS-CoV-2","TAATAGGCACCCCATT",6,25.79,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V11P K56Y F99T E141I",4
"lib2","SARS-CoV-2","TAATAGGCGGAAACAT",7,1.7,NA,NA,NA,NA,NA,NA,"stop","E10K A14G S69L V77R L95R N120S I142Y F160T G172* T201P",10
"lib2","SARS-CoV-2","TAATAGGGCCAGCCCT",10,182.52,9.37,-1.46,0.05,1.77,1.1,0,">1 nonsynonymous","A14F Y39Q N64P",3
"lib2","SARS-CoV-2","TAATAGGGCTTAATAT",3,29.16,6,-4.84,2,1.5,1.12,0.02,"1 nonsynonymous","A67P",1
"lib2","SARS-CoV-2","TAATAGGTCACACATC",4,29.24,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","L5H S41P Q176Y",3
"lib2","SARS-CoV-2","TAATAGGTGAGCCCAA",4,40.11,10.78,-0.06,0.05,2.97,1.06,0,">1 nonsynonymous","P54T T201R",2
"lib2","SARS-CoV-2","TAATAGGTTCAATTTT",10,46.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10R V37R T85Q D112W",4
"lib2","SARS-CoV-2","TAATAGTAAACCTAGC",17,197,10.42,-0.42,0.03,2.91,1.08,0,">1 nonsynonymous","F62V T85V D98A",3
"lib2","SARS-CoV-2","TAATAGTAAGGTATTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23N D90P S113P",3
"lib2","SARS-CoV-2","TAATAGTAGACTTAGA",2,32.51,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D112G E135R",2
"lib2","SARS-CoV-2","TAATAGTAGCGAATAG",3,14.05,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I80L V103T F126I Y159R",4
"lib2","SARS-CoV-2","TAATAGTCAAAAAATC",5,37.37,9.58,-1.25,0.11,2.15,1.13,0.01,">1 nonsynonymous","F47L I138P V153D",3
"lib2","SARS-CoV-2","TAATAGTCACCATGTT",11,151.6,9.2,-1.64,0.04,2.93,1.07,0,">1 nonsynonymous","I2N G117M",2
"lib2","SARS-CoV-2","TAATAGTGCGAAAGAC",2,14.53,10.87,0.04,0.11,2.75,1.19,0.01,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","TAATATAAAAATATCA",6,12.47,10.04,-0.79,0.15,2.22,1.12,0.01,">1 nonsynonymous","L5R F47S K199I",3
"lib2","SARS-CoV-2","TAATATAAAACTCTGA",3,50.63,10.86,0.02,0.05,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATAAACCATCAA",2,60.78,10.86,0.02,0.05,2.91,1.1,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","TAATATAAAGGATATA",6,117.03,10.12,-0.72,0.02,2.96,1.03,0,">1 nonsynonymous","S41L S164G",2
"lib2","SARS-CoV-2","TAATATAAAGTAATTT",2,15.28,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","Y123T P161R Y178L",3
"lib2","SARS-CoV-2","TAATATAACGCCGCAA",2,55.94,10.31,-0.53,0.05,2.89,1.05,0,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","TAATATAACGCGCAAT",12,65.67,6.12,-4.72,0.66,1.52,1.25,0.02,">1 nonsynonymous","P96Q N109G S139K P149W",4
"lib2","SARS-CoV-2","TAATATAATAATAATA",5,19.73,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","S19V T55I W106R T201K",4
"lib2","SARS-CoV-2","TAATATAATAATATAT",2,56.01,10.26,-0.58,0.04,2.75,1.05,0,">1 nonsynonymous","V52C Q84Y",2
"lib2","SARS-CoV-2","TAATATAATAGGTGCC",3,15.46,6.37,-4.46,1.12,1.5,1.11,0.05,">1 nonsynonymous","T15D R124V E141Q P197W",4
"lib2","SARS-CoV-2","TAATATAATCATTAAG",9,138.22,8.98,-1.85,0.06,2.58,1.05,0,">1 nonsynonymous","Y39K G74N",2
"lib2","SARS-CoV-2","TAATATAATTGATCTG",12,44.39,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","A89V C102L D112Y N120R K128L T148S",6
"lib2","SARS-CoV-2","TAATATACAAAGCCTT",1,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127D S164L",2
"lib2","SARS-CoV-2","TAATATACGCTGACCC",10,117.73,7.94,-2.9,0.31,1.5,1.01,0.03,">1 nonsynonymous","S69W A81T N110I",3
"lib2","SARS-CoV-2","TAATATACTCAGGCAA",1,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S L188V",2
"lib2","SARS-CoV-2","TAATATAGAATACTAG",1,41.22,8.18,-2.65,0.09,2.01,1.04,0,">1 nonsynonymous","S19Q Q84F T100K S129Y",4
"lib2","SARS-CoV-2","TAATATAGAGCACCTA",8,43.04,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","V71P",1
"lib2","SARS-CoV-2","TAATATAGCAAAGGTT",5,154.1,10.85,0.01,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATAGGAATGGTA",6,155.77,6.46,-4.37,0.49,1.5,1.18,0.02,">1 nonsynonymous","F17I L60S A105V",3
"lib2","SARS-CoV-2","TAATATAGGGTGCTAA",5,4.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAATATATAAGCCAAT",4,12.33,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","T15D S41V G101C N118D C150Q",5
"lib2","SARS-CoV-2","TAATATATACAACGAT",3,1.58,NA,NA,NA,NA,NA,NA,"stop","V37* R136L G172S",3
"lib2","SARS-CoV-2","TAATATATATGGAGGC",3,0,NA,NA,NA,NA,NA,NA,"stop","S43M C49P D68P E141* T148Q",5
"lib2","SARS-CoV-2","TAATATATCCGTCCGC",4,66.15,7.13,-3.71,0.21,1.5,1.12,0.01,">1 nonsynonymous","F47C N64C D112L T201E",4
"lib2","SARS-CoV-2","TAATATATGATTATAC",5,79.47,8.73,-2.1,0.09,2.87,1.11,0,">1 nonsynonymous","Q84S K128D T170V",3
"lib2","SARS-CoV-2","TAATATATGCCACGCA",3,10.24,10.68,-0.15,0.09,2.84,1.21,0,"1 nonsynonymous","G196M",1
"lib2","SARS-CoV-2","TAATATATGGATGCTT",3,24.95,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","K56F L95S I142T",3
"lib2","SARS-CoV-2","TAATATATGTGACTTC",9,164.93,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I2N V11S A33P G86V I138T N157Y",6
"lib2","SARS-CoV-2","TAATATATTCATATAG",7,145.91,10.82,-0.02,0.03,2.93,1.05,0,">1 nonsynonymous","N40R T85R D97Y L122S K199R",5
"lib2","SARS-CoV-2","TAATATATTCCGGGAC",1,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G I142Q G146R V181E T201P",5
"lib2","SARS-CoV-2","TAATATCAAATTAAAA",3,1.3,NA,NA,NA,NA,NA,NA,"stop","P96T C102R G166*",3
"lib2","SARS-CoV-2","TAATATCAGATACAGT",3,13.09,10.96,0.12,0.1,2.77,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATCAGGTATCTT",1,0.22,NA,NA,NA,NA,NA,NA,"stop","N13S G116* S139Y",3
"lib2","SARS-CoV-2","TAATATCATGCCGTTT",9,6.85,NA,NA,NA,NA,NA,NA,"stop","N64L W106* R127S",3
"lib2","SARS-CoV-2","TAATATCCACCAGATC",5,0,NA,NA,NA,NA,NA,NA,"stop","C61* F70R T148K F156Y F185P",5
"lib2","SARS-CoV-2","TAATATCCATGGTTCG",2,41.77,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N40A P54C D112N G166M",4
"lib2","SARS-CoV-2","TAATATCCCATTCGAT",13,172.69,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E10L D59K G86R Q144L Q163L V173D",6
"lib2","SARS-CoV-2","TAATATCCCTGAAATG",7,33.43,6,-4.84,2,3,1.21,0,">1 nonsynonymous","N13L S19A K94S S129D",4
"lib2","SARS-CoV-2","TAATATCGCGAGTTTC",4,42.8,10.69,-0.15,0.03,2.9,1.1,0,"1 nonsynonymous","Q84H",1
"lib2","SARS-CoV-2","TAATATCGCTTGTCAA",2,16.55,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D97R C102V W106K",3
"lib2","SARS-CoV-2","TAATATCTAAACCTTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","TAATATCTATTTCTAC",1,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33L Y91V",2
"lib2","SARS-CoV-2","TAATATCTCAGAATTA",2,42.48,10.2,-0.63,0.06,2.9,1.02,0,">1 nonsynonymous","Y123T T201R",2
"lib2","SARS-CoV-2","TAATATCTGGGTAGGT",2,69.8,10.6,-0.24,0.08,2.83,1.16,0,">1 nonsynonymous","K56Q R78T T140L",3
"lib2","SARS-CoV-2","TAATATCTTAGGCGGG",4,27.98,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S41A P96V G155V L183A",4
"lib2","SARS-CoV-2","TAATATCTTCTTGCTG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S45N Y175*",2
"lib2","SARS-CoV-2","TAATATCTTTGCGATT",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S D97R I104P C158A",4
"lib2","SARS-CoV-2","TAATATGAAAACCCCC",6,34.63,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V103T P177Y",2
"lib2","SARS-CoV-2","TAATATGACAGATCAC",6,2.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A18M",1
"lib2","SARS-CoV-2","TAATATGAGATTATCG",13,159.77,10.9,0.07,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATGATAGAGAAA",12,163.57,9.75,-1.08,0.08,2.41,1.04,0,">1 nonsynonymous","C31E G83S T201W",3
"lib2","SARS-CoV-2","TAATATGATATTAAAG",4,891.11,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6S V77T Q168C",3
"lib2","SARS-CoV-2","TAATATGATCTATAAT",2,5.33,NA,NA,NA,NA,NA,NA,"stop","C61* Y121K",2
"lib2","SARS-CoV-2","TAATATGCCTTCCGCA",9,159.3,10.85,0.02,0.06,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATATGCGTACCCAC",1,17.28,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","D112V N120K P133T A190M",4
"lib2","SARS-CoV-2","TAATATGGCAGAAGCA",2,61.56,10.19,-0.65,0.08,2.73,1.1,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TAATATGGCGATAGGC",2,25.71,6.81,-4.03,0.66,1.5,1.17,0.05,">1 nonsynonymous","F62L R127S P133L",3
"lib2","SARS-CoV-2","TAATATGTATACTTGC",6,2.22,NA,NA,NA,NA,NA,NA,"stop","F12L A18E K56M D97A W106R V115R A145*",7
"lib2","SARS-CoV-2","TAATATGTGAATATGA",7,127.43,10.8,-0.04,0.05,2.86,1.13,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","TAATATGTGGTAAAGA",3,7.23,6.85,-3.99,0.8,1.5,1,0.06,">1 nonsynonymous","C61K Q84F P96L G155A",4
"lib2","SARS-CoV-2","TAATATGTTATTGAAA",1,13.12,10.02,-0.82,0.1,2.99,1,0,">1 nonsynonymous","N58L K87C",2
"lib2","SARS-CoV-2","TAATATTAAACCTCGT",5,1.21,NA,NA,NA,NA,NA,NA,"stop","N1* S129N F167S",3
"lib2","SARS-CoV-2","TAATATTAAAGTCCAG",4,72.29,10.78,-0.06,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATTAACAACAGC",11,137.58,9.73,-1.11,0.06,2.22,1.03,0,"1 nonsynonymous","V181T",1
"lib2","SARS-CoV-2","TAATATTAAGCGTAGA",1,13.3,8.72,-2.12,0.15,1.75,1.22,0.01,">1 nonsynonymous","G74L F134W",2
"lib2","SARS-CoV-2","TAATATTAGATAAATT",1,0.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33C T63N T85Y N107Y G116V T148K C158Y T201S",8
"lib2","SARS-CoV-2","TAATATTAGCGACGCT",4,27.76,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","P82L G116N S184K",3
"lib2","SARS-CoV-2","TAATATTAGGCGTCTA",2,34.23,10.8,-0.03,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATATTATCTCGATA",5,0.43,NA,NA,NA,NA,NA,NA,"stop","G9* Y50T C61S P96S",4
"lib2","SARS-CoV-2","TAATATTCAAAAACCA",4,115.27,9.89,-0.95,0.07,2.18,1.01,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","TAATATTCACAAGAAA",1,49.28,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A145L F156S Y165S P177S",4
"lib2","SARS-CoV-2","TAATATTCAGATACCC",6,187.69,9.77,-1.06,0.03,2.75,1.06,0,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","TAATATTGATAATGAT",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I L60N N92L W106H S139R",5
"lib2","SARS-CoV-2","TAATATTGGCTAAAAT",2,7.31,6.4,-4.44,0.2,2.36,1.02,0.01,">1 nonsynonymous","L125I C158L",2
"lib2","SARS-CoV-2","TAATATTGGTAAATAG",9,33.79,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","TAATATTGTGTATACA",7,111.1,9.27,-1.56,0.06,2.34,1.08,0,">1 nonsynonymous","E76T K87E",2
"lib2","SARS-CoV-2","TAATATTTAAACAACT",4,41.03,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64G I88N N120H G146K",4
"lib2","SARS-CoV-2","TAATATTTAATTATTT",2,20.18,10.85,0.01,0.07,2.88,1.14,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","TAATATTTATTTGTAG",8,85.38,9.82,-1.02,0.07,2.61,1.06,0,">1 nonsynonymous","Q79L N120R",2
"lib2","SARS-CoV-2","TAATATTTCAACTACG",8,71,10.3,-0.54,0.03,2.93,1.07,0,">1 nonsynonymous","P54Y G174L",2
"lib2","SARS-CoV-2","TAATATTTGAAACACA",1,6,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","T3R F70L K132E Y165S",4
"lib2","SARS-CoV-2","TAATATTTTAGTTACA",1,19.13,10.93,0.1,0.07,2.93,1.08,0,">1 nonsynonymous","Y91F I104Y",2
"lib2","SARS-CoV-2","TAATATTTTGAAAAAA",6,77.1,10.75,-0.09,0.03,2.99,1,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","TAATATTTTTGCACTG",1,17.72,10.97,0.13,0.06,2.88,1.1,0,">1 nonsynonymous","T3D Q163M",2
"lib2","SARS-CoV-2","TAATCAAAAAAAATAT",2,0.6,NA,NA,NA,NA,NA,NA,"stop","S19A V65K G117*",3
"lib2","SARS-CoV-2","TAATCAAAAACTATTA",6,44.77,9.94,-0.89,0.1,2.29,1.02,0,"1 nonsynonymous","V11H",1
"lib2","SARS-CoV-2","TAATCAAAACTTTTTA",2,9.39,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","R27T Y93D R127L I138A T148K",5
"lib2","SARS-CoV-2","TAATCAAAATACCTTG",6,28.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G9R D68N A89T I142S G166E",5
"lib2","SARS-CoV-2","TAATCAAACAAATCCT",8,96.61,10.66,-0.17,0.07,2.94,1.07,0,">1 nonsynonymous","S53L T63D",2
"lib2","SARS-CoV-2","TAATCAAACAGTTAAC",4,73.14,9.3,-1.53,0.05,2.91,1.07,0,">1 nonsynonymous","N1M G9D Y119E V173Y",4
"lib2","SARS-CoV-2","TAATCAAAGAACCAAC",1,33.41,10.71,-0.13,0.06,2.85,1.13,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","TAATCAAATAGAATTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35S S45Y Y119* I138S",4
"lib2","SARS-CoV-2","TAATCAAATGAATGTT",2,22.81,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","L5A V37S K48T C102R R124H F160V",6
"lib2","SARS-CoV-2","TAATCAAATGATATGT",1,7.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64D A81T G86F D98R P149R P191N",6
"lib2","SARS-CoV-2","TAATCAACAAGTAATG",7,2.86,NA,NA,NA,NA,NA,NA,"stop","C150*",1
"lib2","SARS-CoV-2","TAATCAACCAGGACTG",9,77.75,9.79,-1.05,0.09,2.34,1.05,0,">1 nonsynonymous","D75L D98V",2
"lib2","SARS-CoV-2","TAATCAACGCCCCATG",14,83.55,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","C49R L95M Y121W",3
"lib2","SARS-CoV-2","TAATCAACTAAGCCGA",2,24.72,6.53,-4.3,0.47,1.5,1.1,0.04,">1 nonsynonymous","N64M G86D N107S F134W",4
"lib2","SARS-CoV-2","TAATCAACTCTAGTAT",3,5.46,9.89,-0.95,0.3,2.62,1.1,0.02,">1 nonsynonymous","R16G F44A",2
"lib2","SARS-CoV-2","TAATCAACTTAAGGGT",2,13.83,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C49S F134C",2
"lib2","SARS-CoV-2","TAATCAAGAGGCCAGA",10,101.28,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F44S I80P L95Q A105R G146L",5
"lib2","SARS-CoV-2","TAATCAAGGACGTATT",4,79.12,10.3,-0.53,0.04,2.85,1.11,0,">1 nonsynonymous","F44D F134W",2
"lib2","SARS-CoV-2","TAATCAAGTAAAGTTA",6,22.78,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","Y35P S113Q G155S",3
"lib2","SARS-CoV-2","TAATCAAGTAAGACAT",1,24.9,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A18W V65E P169D",3
"lib2","SARS-CoV-2","TAATCAAGTACTGTTC",2,8.34,8.4,-2.43,0.15,2.94,1,0.02,">1 nonsynonymous","T3N V11W Y66I T170E",4
"lib2","SARS-CoV-2","TAATCAAGTGCGATAT",2,31.95,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","A14S V37M R73N N120T",4
"lib2","SARS-CoV-2","TAATCAATCACATTTG",2,11.41,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","L5F R124L",2
"lib2","SARS-CoV-2","TAATCAATCCATCCCT",3,27.25,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G9N Y50F G83M I104F R127V",5
"lib2","SARS-CoV-2","TAATCAATCCTAACTT",2,27.45,10.86,0.02,0.05,2.89,1.12,0,">1 nonsynonymous","K128E S200I",2
"lib2","SARS-CoV-2","TAATCAATCTTAAGGG",19,303.18,10.8,-0.03,0.03,2.91,1.07,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","TAATCACAAATTATTA",5,41.25,9.33,-1.51,0.11,2.48,1.06,0.01,">1 nonsynonymous","N1G F62I G146F",3
"lib2","SARS-CoV-2","TAATCACAACAATAAA",3,76.8,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R124I K132L V173L R179K",4
"lib2","SARS-CoV-2","TAATCACACCCCAGGG",11,6.83,NA,NA,NA,NA,NA,NA,"stop","G86H Y143*",2
"lib2","SARS-CoV-2","TAATCACACGCCCGGT",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53G N120E",2
"lib2","SARS-CoV-2","TAATCACAGTATTGCG",10,4.26,NA,NA,NA,NA,NA,NA,"stop","F8* G51E Y91T F99* N130V V173P",6
"lib2","SARS-CoV-2","TAATCACCCATTTCTC",10,164.22,10.87,0.03,0.05,2.94,1.07,0,">1 nonsynonymous","T100H I104F",2
"lib2","SARS-CoV-2","TAATCACGACGGCGGA",3,2.49,NA,NA,NA,NA,NA,NA,"stop","F8V T63K A89* W106*",4
"lib2","SARS-CoV-2","TAATCACGTTATAGTT",1,32.57,9.8,-1.03,0.09,2.25,1.04,0,">1 nonsynonymous","S45C T85D",2
"lib2","SARS-CoV-2","TAATCACTAAGAATAA",6,30.5,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D97L W106N Y143Q",3
"lib2","SARS-CoV-2","TAATCACTAAGTGATA",4,0.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","TAATCACTAGTTGATT",8,98.7,8.96,-1.88,0.24,1.5,1,0.02,">1 nonsynonymous","A81Y L122R Y178S",3
"lib2","SARS-CoV-2","TAATCAGAAAGAATCG",3,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V T46G N58F G83F T170R G174V",6
"lib2","SARS-CoV-2","TAATCAGAAATATAGG",2,32.39,8.2,-2.64,0.1,2.76,1.09,0,">1 nonsynonymous","L5Y N58S K87L I142D",4
"lib2","SARS-CoV-2","TAATCAGAACGAGTAA",4,10.5,6.04,-4.8,1.06,1.5,1.11,0.02,">1 nonsynonymous","T3R I72S G117V Q168L G174V",5
"lib2","SARS-CoV-2","TAATCAGACGACCAGG",2,21.64,7.14,-3.7,0.19,1.88,1.09,0.01,">1 nonsynonymous","I2L D34H K87I Y165L",4
"lib2","SARS-CoV-2","TAATCAGAGGGGTCAG",7,37.47,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86A R124C",2
"lib2","SARS-CoV-2","TAATCAGCAGCCTGAG",2,72.9,10.17,-0.66,0.05,2.9,1.03,0,">1 nonsynonymous","Y35E T201Y",2
"lib2","SARS-CoV-2","TAATCAGCCAGTTAAA",10,23.26,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V77A S113P",2
"lib2","SARS-CoV-2","TAATCAGGAACTCCAC",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S A18G A42Y R136Q",4
"lib2","SARS-CoV-2","TAATCAGGTGAATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","D34P C61M Q84E T100* Q163I",5
"lib2","SARS-CoV-2","TAATCAGTAGCACCAA",1,40.18,10.78,-0.05,0.05,3,1,0,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","TAATCAGTTGAACCAA",4,37.17,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A18C P96L",2
"lib2","SARS-CoV-2","TAATCATAAAACCGGA",1,4.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S G86Y K114T",3
"lib2","SARS-CoV-2","TAATCATAATTACCAA",8,19.69,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13Y V37W C49I S69R K87E",5
"lib2","SARS-CoV-2","TAATCATACGCTTTAC",1,0.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P169K",1
"lib2","SARS-CoV-2","TAATCATAGAGATTGC",8,3.98,NA,NA,NA,NA,NA,NA,"stop","F44E F134* T201W",3
"lib2","SARS-CoV-2","TAATCATAGCACAGTC",3,30.94,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","C6M T55L D59N I104A F167R",5
"lib2","SARS-CoV-2","TAATCATCAAAAGAGG",12,82.3,10.72,-0.11,0.07,2.83,1.14,0,">1 nonsynonymous","Y39Q R78T K132M",3
"lib2","SARS-CoV-2","TAATCATCATATCTTC",2,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33E D90T P96Q D112A V181L",5
"lib2","SARS-CoV-2","TAATCATCTTTTGATT",4,14.77,6,-4.84,2,3,1.07,0,">1 nonsynonymous","S164G L183R",2
"lib2","SARS-CoV-2","TAATCATGGTAAGACT",2,65.7,9.08,-1.75,0.05,2.86,1.16,0,">1 nonsynonymous","N4E R27E Y119I",3
"lib2","SARS-CoV-2","TAATCATTATATACGA",10,204.21,8.23,-2.61,0.12,1.72,1.12,0.01,">1 nonsynonymous","G9S R136G N157G",3
"lib2","SARS-CoV-2","TAATCATTCGACACTA",4,59.39,8.71,-2.12,0.17,1.55,1.08,0.01,">1 nonsynonymous","V20G V37E",2
"lib2","SARS-CoV-2","TAATCATTGAAGGGTG",10,162.28,10.18,-0.66,0.04,2.84,1.03,0,">1 nonsynonymous","E10Y S43T N151E",3
"lib2","SARS-CoV-2","TAATCATTGATACTAA",3,14.75,8.14,-2.7,0.21,1.5,1.09,0.02,">1 nonsynonymous","G51N F99L E141G S184M",4
"lib2","SARS-CoV-2","TAATCATTTAGAAAAC",2,8.69,10.33,-0.5,0.38,1.86,1,0.06,">1 nonsynonymous","N40S A89M",2
"lib2","SARS-CoV-2","TAATCATTTAGAGCTG",1,3.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61F V103L",2
"lib2","SARS-CoV-2","TAATCCAAAATAACTG",5,73.63,9.37,-1.47,0.05,2.94,1.04,0,">1 nonsynonymous","R73L K87V",2
"lib2","SARS-CoV-2","TAATCCAAATTATATA",8,120.64,10.81,-0.03,0.04,2.95,1.07,0,">1 nonsynonymous","D59S L122Y",2
"lib2","SARS-CoV-2","TAATCCAACTTATTAG",5,40.29,6.03,-4.81,0.82,1.5,1.19,0.02,">1 nonsynonymous","G74M A89G Y123L L131K P149N Q163P Y178H",7
"lib2","SARS-CoV-2","TAATCCAAGCACATGT",6,51.5,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V32C N58M S69T N92F",4
"lib2","SARS-CoV-2","TAATCCAAGGAGTCTT",3,30,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V11S A33T Y143A",3
"lib2","SARS-CoV-2","TAATCCAATTGTTTGC",15,198.6,9.13,-1.71,0.1,1.78,1.12,0,">1 nonsynonymous","F8G F134M",2
"lib2","SARS-CoV-2","TAATCCACAAAACATG",2,19.09,10.54,-0.3,0.07,2.95,1.06,0,"1 nonsynonymous","A67I",1
"lib2","SARS-CoV-2","TAATCCACAAGCCAAT",2,122.26,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35V T148P Q176C",3
"lib2","SARS-CoV-2","TAATCCACAATCAGAT",11,81.14,10.69,-0.14,0.05,2.89,1.13,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","TAATCCACCAGATCTT",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55R Y123V P149Q E154R",4
"lib2","SARS-CoV-2","TAATCCACCTTGACTA",1,24.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T G9W T85F D112P Q176K",5
"lib2","SARS-CoV-2","TAATCCACTCATTGGT",6,45.75,10.08,-0.75,0.17,2.45,1.02,0.01,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","TAATCCACTGACCCGC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","D59T V103*",2
"lib2","SARS-CoV-2","TAATCCAGACGTAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98G Q168S",2
"lib2","SARS-CoV-2","TAATCCAGAGGCCCGA",1,14.75,10.49,-0.35,0.11,2.89,1.13,0.01,">1 nonsynonymous","N30R P54V K87Y T140E",4
"lib2","SARS-CoV-2","TAATCCAGTAGTTCGT",13,1.3,NA,NA,NA,NA,NA,NA,"stop","I2* T55G F62N",3
"lib2","SARS-CoV-2","TAATCCATTTTTCATG",2,30.25,9.77,-1.06,0.08,2.41,1.03,0,">1 nonsynonymous","F44T Y123A",2
"lib2","SARS-CoV-2","TAATCCCAAAAACTGG",15,150.48,10.83,-0.01,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATCCCAAAAATAGA",2,65.29,7.4,-3.44,0.2,1.69,1.15,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","TAATCCCAATGCTTAC",3,0,NA,NA,NA,NA,NA,NA,"stop","D68* P149F K198Q",3
"lib2","SARS-CoV-2","TAATCCCACTCTATCA",2,86.58,8.51,-2.32,0.08,2.94,1.07,0,">1 nonsynonymous","S41V N157H",2
"lib2","SARS-CoV-2","TAATCCCATAAAACCA",2,16,9.56,-1.28,0.14,1.82,1,0.01,">1 nonsynonymous","R16A L131A",2
"lib2","SARS-CoV-2","TAATCCCCAAATCATA",1,23.48,6,-4.84,1.51,3,1.15,0,">1 nonsynonymous","S45I T85P N107T R124V F156L",5
"lib2","SARS-CoV-2","TAATCCCCAAATGGGT",4,85.59,9.92,-0.92,0.12,2.43,1,0,"1 nonsynonymous","K48G",1
"lib2","SARS-CoV-2","TAATCCCCACTAAAAA",3,18.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12K L60H S113F",3
"lib2","SARS-CoV-2","TAATCCCGGCCATTGG",2,1.99,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","TAATCCCTCCTGTGCA",13,161.01,10.62,-0.22,0.03,2.95,1.05,0,">1 nonsynonymous","N4C N64V",2
"lib2","SARS-CoV-2","TAATCCGACATTACAT",4,2.83,NA,NA,NA,NA,NA,NA,"stop","K56* I80L G86L",3
"lib2","SARS-CoV-2","TAATCCGACTAATTGC",5,164.03,10.15,-0.68,0.02,2.62,1.06,0,"1 nonsynonymous","A18L",1
"lib2","SARS-CoV-2","TAATCCGCCATTTTAG",9,69.96,6.01,-4.82,1.56,1.5,1.34,0.04,">1 nonsynonymous","V11G T100S T148S E154Y",4
"lib2","SARS-CoV-2","TAATCCGGGACGTTAT",8,8.27,NA,NA,NA,NA,NA,NA,"stop","F44A P96* D98I V103T N109M E135V T201D",7
"lib2","SARS-CoV-2","TAATCCGTCACGATTA",9,38.89,9.44,-1.39,0.1,1.9,1.1,0.01,">1 nonsynonymous","V11K T201L",2
"lib2","SARS-CoV-2","TAATCCGTCTTGCCAA",3,2.11,NA,NA,NA,NA,NA,NA,"stop","C49E F62G N107E G174*",4
"lib2","SARS-CoV-2","TAATCCTAACATACAT",5,119.5,10.83,-0.01,0.04,2.94,1.08,0,">1 nonsynonymous","Q84A N151G",2
"lib2","SARS-CoV-2","TAATCCTAGTAGCGAA",3,36.08,10.78,-0.06,0.08,2.89,1.06,0,">1 nonsynonymous","T46L T201L",2
"lib2","SARS-CoV-2","TAATCCTATCTACAAT",1,38.13,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C158V G166A",2
"lib2","SARS-CoV-2","TAATCCTATGGTGAAA",2,54.28,9.22,-1.62,0.08,2.89,1.08,0,">1 nonsynonymous","G9Y E154F",2
"lib2","SARS-CoV-2","TAATCCTCAAAATGAA",6,64.79,10.71,-0.12,0.04,2.87,1.14,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","TAATCCTCCTTCGAAA",4,107.57,10.8,-0.03,0.06,2.84,1.1,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","TAATCCTCGAAGAAGG",5,30.01,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R25L G86Y N92L V173T",4
"lib2","SARS-CoV-2","TAATCCTGCGACCACA",13,126.32,10.64,-0.19,0.04,2.94,1.08,0,"1 nonsynonymous","A33G",1
"lib2","SARS-CoV-2","TAATCCTTACCTTTAG",4,0.51,NA,NA,NA,NA,NA,NA,"stop","E10* V37* I104M G155M",4
"lib2","SARS-CoV-2","TAATCCTTAGCGCAAG",2,8.45,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1Y L122E R136Q Y143L Y178V G196R",6
"lib2","SARS-CoV-2","TAATCCTTCGCCTAAG",10,81.54,8.86,-1.98,0.17,1.58,1.08,0.01,"1 nonsynonymous","V20G",1
"lib2","SARS-CoV-2","TAATCGAAGCCCCCCT",2,104.41,8.49,-2.35,0.11,2.73,1.03,0,">1 nonsynonymous","S113A Y119L Q144K",3
"lib2","SARS-CoV-2","TAATCGAATAGAGAAA",1,6.01,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","K87G R127T",2
"lib2","SARS-CoV-2","TAATCGAATCATTGGA",17,43.07,6,-4.84,2,3,1.13,0,"1 nonsynonymous","C102H",1
"lib2","SARS-CoV-2","TAATCGACCCCGATCA",5,51.14,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L125R C158P",2
"lib2","SARS-CoV-2","TAATCGAGAGAAACTA",11,194.11,10.7,-0.13,0.03,2.96,1.04,0,"1 nonsynonymous","S53F",1
"lib2","SARS-CoV-2","TAATCGAGAGCCCGAA",1,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R C61S Q163H",3
"lib2","SARS-CoV-2","TAATCGATATCCGAGT",3,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L N40V K114Y T148L",4
"lib2","SARS-CoV-2","TAATCGCCCCGCTTAA",1,16.07,8.82,-2.02,0.14,1.92,1.08,0.01,">1 nonsynonymous","V32W C61L V115A A145V Y178S",5
"lib2","SARS-CoV-2","TAATCGCCGGATAAAA",8,54.98,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S41H G51S L95P C150G P169V",5
"lib2","SARS-CoV-2","TAATCGCCGTATACCG",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C L57C",2
"lib2","SARS-CoV-2","TAATCGCGATTTGACG",8,197.68,10.82,-0.02,0.05,2.96,1.07,0,"1 nonsynonymous","T201W",1
"lib2","SARS-CoV-2","TAATCGCGGAATATAG",10,29.08,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","V77E L125R P133N A190T",4
"lib2","SARS-CoV-2","TAATCGCTCCGCACTT",1,13.19,10.37,-0.46,0.1,2.74,1.27,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","TAATCGGGACACCACC",7,8.46,NA,NA,NA,NA,NA,NA,"stop","D68G T100R L122N Q176*",4
"lib2","SARS-CoV-2","TAATCGGGTTAAGCGC",4,85.17,10.78,-0.05,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATCGGTCTAGTTCA",1,13.84,10.19,-0.64,0.09,3,1,0,">1 nonsynonymous","L125S V153M",2
"lib2","SARS-CoV-2","TAATCGTAAAATGGAC",5,56.56,9.07,-1.76,0.21,1.5,1.02,0.02,">1 nonsynonymous","F44P W106L T148A",3
"lib2","SARS-CoV-2","TAATCGTAACCGACAA",1,24.99,10.88,0.05,0.05,3,1.02,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","TAATCGTACAAATAGG",5,74.74,10.1,-0.73,0.03,2.95,1.07,0,">1 nonsynonymous","N120I F156A",2
"lib2","SARS-CoV-2","TAATCGTACGCGCAAC",1,26.71,10.34,-0.5,0.14,2.44,1.15,0.01,">1 nonsynonymous","V37N R136A",2
"lib2","SARS-CoV-2","TAATCGTATGATCCTT",3,175.03,10.88,0.04,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATCGTTGGCAATAT",4,193.15,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N107T N120R Q176P",3
"lib2","SARS-CoV-2","TAATCGTTTCACCGTT",2,15.18,10.69,-0.15,0.12,3,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATCTAAAAAGACAA",4,92.56,10.68,-0.15,0.03,2.92,1.09,0,">1 nonsynonymous","Y123S S200H",2
"lib2","SARS-CoV-2","TAATCTAAAGGCGATT",11,145.85,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D68P N120L",2
"lib2","SARS-CoV-2","TAATCTAACTATACCT",2,33.76,10.74,-0.09,0.04,2.9,1.13,0,"1 nonsynonymous","F62M",1
"lib2","SARS-CoV-2","TAATCTAACTTATTGG",19,101.78,7.9,-2.93,0.27,1.5,1.14,0.02,"1 nonsynonymous","V77G",1
"lib2","SARS-CoV-2","TAATCTAAGCCCCAAT",4,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85P I104D G116P K132C A145L T170V",6
"lib2","SARS-CoV-2","TAATCTAAGGAAGCAA",3,20.18,10.07,-0.76,0.1,2.24,1,0.01,">1 nonsynonymous","N1L V52I N107S",3
"lib2","SARS-CoV-2","TAATCTAATGGCCATT",8,17.85,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","D90Y D98K V103G P197M",4
"lib2","SARS-CoV-2","TAATCTACCGTTAAAT",2,35.74,10.19,-0.65,0.04,2.97,1,0,">1 nonsynonymous","N118Y K128E",2
"lib2","SARS-CoV-2","TAATCTACTAGGATAA",5,28.45,10.89,0.05,0.09,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATCTAGATTCAATA",3,56.01,8.85,-1.98,0.06,2.86,1.08,0,"1 nonsynonymous","Y143Q",1
"lib2","SARS-CoV-2","TAATCTAGCGAACTTT",8,85.44,10.86,0.03,0.04,2.92,1.09,0,"1 nonsynonymous","V37D",1
"lib2","SARS-CoV-2","TAATCTAGCTTTGTGA",2,38.91,9.5,-1.34,0.13,1.67,1.19,0.01,">1 nonsynonymous","G83V T140P T201W",3
"lib2","SARS-CoV-2","TAATCTAGCTTTTGGA",2,36.68,10.13,-0.71,0.05,2.91,1.08,0,">1 nonsynonymous","G9L K87M E141T",3
"lib2","SARS-CoV-2","TAATCTAGGACGACCA",6,132.07,10.9,0.07,0.06,2.93,1.06,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","TAATCTATAGTAAATT",2,12.47,11.23,0.39,0.05,3,1,0,">1 nonsynonymous","I2A N120L N171F",3
"lib2","SARS-CoV-2","TAATCTATCTCCATAA",1,68.09,6.06,-4.78,1.26,1.5,1.24,0.02,">1 nonsynonymous","S41P V103T F134E",3
"lib2","SARS-CoV-2","TAATCTCAAACAAAAC",1,9.2,8.81,-2.03,0.38,1.75,1.23,0.05,">1 nonsynonymous","N30R D112L",2
"lib2","SARS-CoV-2","TAATCTCAAACAAGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8G S29* G86H K94L K128A P149K",6
"lib2","SARS-CoV-2","TAATCTCAAGCCTTTA",3,23.88,10.75,-0.08,0.06,2.98,1.07,0,"1 nonsynonymous","S200C",1
"lib2","SARS-CoV-2","TAATCTCAATATCCTA",2,12.42,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K56M A105Y D112Y E135L",4
"lib2","SARS-CoV-2","TAATCTCATTAAGCTT",4,88.99,10.82,-0.01,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATCTCCAAAAAAAA",4,79.05,10.72,-0.11,0.03,2.93,1.05,0,"1 nonsynonymous","A33L",1
"lib2","SARS-CoV-2","TAATCTCCTACATCGG",3,20.56,6.89,-3.94,0.28,1.5,1.05,0.02,">1 nonsynonymous","C6L D34V Y121I",3
"lib2","SARS-CoV-2","TAATCTCGACAGGGTA",5,52.84,10.84,0,0.04,2.86,1.14,0,">1 nonsynonymous","L5S K199W",2
"lib2","SARS-CoV-2","TAATCTCGCTTCAGGA",13,52.48,9.87,-0.97,0.07,2.17,1.07,0,"1 nonsynonymous","I28Q",1
"lib2","SARS-CoV-2","TAATCTGACTAAATTC",7,181.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6S V20S T85K F160E",4
"lib2","SARS-CoV-2","TAATCTGCAAAATTGG",13,44.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V52N I104H G152T",3
"lib2","SARS-CoV-2","TAATCTGGAGCGGCAG",1,1.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAATCTGGGCTTTTGG",6,0.83,NA,NA,NA,NA,NA,NA,"stop","C31T G83* Y165L V180M",4
"lib2","SARS-CoV-2","TAATCTGTATCTAACA",6,94.05,10.8,-0.04,0.07,2.9,1.11,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","TAATCTGTATTAGTAG",3,0,NA,NA,NA,NA,NA,NA,"stop","L5Q F62C V77* I142N C158M",5
"lib2","SARS-CoV-2","TAATCTGTCACACGAA",8,0.41,NA,NA,NA,NA,NA,NA,"stop","L60A P96S K198*",3
"lib2","SARS-CoV-2","TAATCTGTGAATAAGA",7,1.54,NA,NA,NA,NA,NA,NA,"stop","A33S D59* F99L V115M",4
"lib2","SARS-CoV-2","TAATCTTAGCAAAAAA",19,62.27,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","T3K D34L A105T V115R G152V",5
"lib2","SARS-CoV-2","TAATCTTCATAACTCT",1,6.86,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","N4W G101L Y119M",3
"lib2","SARS-CoV-2","TAATCTTCCTCACGAA",9,0,NA,NA,NA,NA,NA,NA,"stop","N4Q F44* S200G",3
"lib2","SARS-CoV-2","TAATCTTTAAATCAAT",10,70.69,9.19,-1.65,0.06,1.88,1.03,0,">1 nonsynonymous","C61K L95F T201S",3
"lib2","SARS-CoV-2","TAATCTTTACCTTGCT",11,131.26,10.91,0.08,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGAAAAACCTAAG",1,3.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R D112E P149R A190S",4
"lib2","SARS-CoV-2","TAATGAAAAAGTCCAT",2,30.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F12G Y159I G196S",3
"lib2","SARS-CoV-2","TAATGAAAAATGAACA",28,121.88,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D68L D75Q L162A",3
"lib2","SARS-CoV-2","TAATGAAAATACTATA",3,13.66,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","G86W P133Q E154G",3
"lib2","SARS-CoV-2","TAATGAAAATGAAATA",2,22.93,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","A105V E141D C158L",3
"lib2","SARS-CoV-2","TAATGAAACAAAAGAA",8,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M W23C C49F L95H G172R",5
"lib2","SARS-CoV-2","TAATGAAACACAGATT",2,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77F A190P",2
"lib2","SARS-CoV-2","TAATGAAAGCAAAACG",5,32.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T C49T V52E F62K R127M",5
"lib2","SARS-CoV-2","TAATGAAAGTTCAGCG",4,81.37,9.44,-1.4,0.13,1.69,1.04,0.01,">1 nonsynonymous","V37W K94L L122V",3
"lib2","SARS-CoV-2","TAATGAAATAAAGGTT",4,39.48,6,-4.84,2,3,1.03,0,">1 nonsynonymous","D97S Q176P",2
"lib2","SARS-CoV-2","TAATGAAATTCTACCC",2,9.1,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A81V S113L P149S",3
"lib2","SARS-CoV-2","TAATGAACGAACATGT",3,14.24,9.03,-1.8,0.07,1.95,1.02,0,">1 nonsynonymous","Q84L T148D G152I",3
"lib2","SARS-CoV-2","TAATGAACGAATTGGC",1,10.34,10.02,-0.82,0.06,2.91,1.12,0,">1 nonsynonymous","N64K D98Y",2
"lib2","SARS-CoV-2","TAATGAACGCCGAAAA",7,10.44,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12A D34M",2
"lib2","SARS-CoV-2","TAATGAACGCTTGTGA",6,25.93,6,-4.84,2,3,1.11,0.01,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","TAATGAACGTTTCACA",1,20.49,6.02,-4.82,1.57,1.5,1.11,0.06,">1 nonsynonymous","K56S A67N L95W R127D G152N Y175L",6
"lib2","SARS-CoV-2","TAATGAAGCAGGGACT",5,35.85,9.79,-1.05,0.1,2.37,1.08,0,">1 nonsynonymous","K128S P149A L187Y T201M",4
"lib2","SARS-CoV-2","TAATGAAGCCTATTAA",5,116.57,9.53,-1.31,0.04,1.86,1.13,0,">1 nonsynonymous","L5G G51V Q84K",3
"lib2","SARS-CoV-2","TAATGAATAAAAACTT",10,21.37,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","R16M D59V P96W G146R",4
"lib2","SARS-CoV-2","TAATGAATACTCACGG",6,52.26,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y119M N130H A145N Y165S",4
"lib2","SARS-CoV-2","TAATGAATAGGCTCTG",1,56.49,9.34,-1.5,0.07,2.76,1.06,0,">1 nonsynonymous","N118F N130S",2
"lib2","SARS-CoV-2","TAATGAATATAAACAT",1,41.5,9.69,-1.15,0.09,2.74,1.11,0.01,">1 nonsynonymous","I2P S45Q N120T",3
"lib2","SARS-CoV-2","TAATGAATATTAGGCA",14,98.13,9.46,-1.38,0.09,1.8,1.1,0,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","TAATGAATGCAACACA",16,122.15,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A89P N107L G152R",3
"lib2","SARS-CoV-2","TAATGAATGGAATACA",3,15.8,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","V11A A33N G51A T85A D98T",5
"lib2","SARS-CoV-2","TAATGAATTGGCAACC",16,55.12,7.81,-3.03,0.29,1.5,1.11,0.03,">1 nonsynonymous","R16Y D137F",2
"lib2","SARS-CoV-2","TAATGACAAGTAAGCT",2,31.48,10.48,-0.36,0.06,3,1.01,0,">1 nonsynonymous","Y50F K56C",2
"lib2","SARS-CoV-2","TAATGACAATGAAGAA",5,33.93,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","R16C N30K D98A Y121V",4
"lib2","SARS-CoV-2","TAATGACACGTGTGGA",2,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99R N118L K198R",3
"lib2","SARS-CoV-2","TAATGACAGCACCTAA",5,14.23,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N1W E10M S129M P161T T201N",5
"lib2","SARS-CoV-2","TAATGACAGCCCCGCA",3,13.28,10.91,0.08,0.05,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATGACATTCCACCA",7,91.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y121T Y165S T201S",3
"lib2","SARS-CoV-2","TAATGACCAAACCCAC",14,163.24,10.6,-0.23,0.03,2.92,1.07,0,"1 nonsynonymous","Q84H",1
"lib2","SARS-CoV-2","TAATGACCAATTATGG",2,40.87,10.84,0.01,0.07,2.84,1.18,0,">1 nonsynonymous","V173L T201A",2
"lib2","SARS-CoV-2","TAATGACCGTTAATTT",8,73.9,10.63,-0.2,0.03,2.95,1.03,0,"1 nonsynonymous","T85F",1
"lib2","SARS-CoV-2","TAATGACCTAAGCTCT",7,79.16,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9S E76T A89N W106V",4
"lib2","SARS-CoV-2","TAATGACCTGTGCACA",5,93.12,6,-4.84,2,2.52,1.13,0,">1 nonsynonymous","G86C Y91N",2
"lib2","SARS-CoV-2","TAATGACGCCGGTTAT",2,24.49,10.5,-0.34,0.06,2.96,1.05,0,">1 nonsynonymous","L60R K87R",2
"lib2","SARS-CoV-2","TAATGACGTACCAAAG",2,56.15,9.49,-1.34,0.07,1.91,1.08,0,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","TAATGACGTCTTAGAG",3,86.37,10.85,0.01,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGACTAGATGGCG",2,41.25,10.69,-0.14,0.04,3,1.03,0,">1 nonsynonymous","D98T L162I",2
"lib2","SARS-CoV-2","TAATGACTCGTGTGTT",10,45.18,9,-1.84,0.12,1.55,1.13,0.01,">1 nonsynonymous","V103M K128Q",2
"lib2","SARS-CoV-2","TAATGACTTAAGGTTA",3,38.91,8.72,-2.11,0.18,1.5,1.01,0.01,">1 nonsynonymous","K48V V103L S139T",3
"lib2","SARS-CoV-2","TAATGAGAAGAACCGT",5,89.24,10.67,-0.17,0.03,2.99,1.02,0,">1 nonsynonymous","P149L C195I",2
"lib2","SARS-CoV-2","TAATGAGACACAAATC",13,69.91,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","G83F V103C R136Q",3
"lib2","SARS-CoV-2","TAATGAGACCATTTCT",2,29.19,7.07,-3.77,0.42,1.5,1.24,0.04,">1 nonsynonymous","W23E A33L",2
"lib2","SARS-CoV-2","TAATGAGCGAATAAAC",1,11.43,10.76,-0.08,0.04,2.96,1.06,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","TAATGAGGAGTAAAAA",2,35.27,10.45,-0.39,0.07,2.79,1.1,0,">1 nonsynonymous","E10S K56V S129A S200L",4
"lib2","SARS-CoV-2","TAATGAGTAATACAAT",2,187.96,10.39,-0.45,0.02,2.92,1.02,0,">1 nonsynonymous","R16D P96S E141N",3
"lib2","SARS-CoV-2","TAATGAGTGACAATAA",1,16.93,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N40L R127L Q144V P161L",4
"lib2","SARS-CoV-2","TAATGAGTGTGCAATG",7,1.06,NA,NA,NA,NA,NA,NA,"stop","N64* D137T P169S P197A",4
"lib2","SARS-CoV-2","TAATGAGTTAATTTAA",8,46.39,6,-4.84,2,3,1.24,0,">1 nonsynonymous","E10K N13Y G86N K114Q R127H G155A",6
"lib2","SARS-CoV-2","TAATGAGTTTACGTTT",2,63.48,10.8,-0.04,0.04,2.96,1.06,0,">1 nonsynonymous","G152S S200L",2
"lib2","SARS-CoV-2","TAATGATAAAATACCA",2,2.71,NA,NA,NA,NA,NA,NA,"stop","P149* Q176V",2
"lib2","SARS-CoV-2","TAATGATAAACATATG",2,20.16,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V52A F99N Y119C F160N",4
"lib2","SARS-CoV-2","TAATGATACACTTGTA",3,14.44,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V77R D97V S129A F185L",4
"lib2","SARS-CoV-2","TAATGATACTTCAAAA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y C61M",2
"lib2","SARS-CoV-2","TAATGATAGATAAGCG",1,5.18,8.89,-1.94,0.31,1.91,1.08,0.03,"1 nonsynonymous","S19Y",1
"lib2","SARS-CoV-2","TAATGATATGTAACGT",2,6.72,6.76,-4.07,0.77,1.5,1.12,0.08,">1 nonsynonymous","N58F C158G",2
"lib2","SARS-CoV-2","TAATGATTAGTTTCGT",3,44.08,10.07,-0.77,0.08,2.88,1.03,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","TAATGATTTATACCAA",15,224.25,9.53,-1.3,0.04,2.8,1.07,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","TAATGCAAAAATGTTT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAATGCAATAATGCCG",5,33.36,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C61S G86I Y119P",3
"lib2","SARS-CoV-2","TAATGCACAAACACGA",5,31.96,10.79,-0.05,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGCACATCCACTT",10,120.49,10.29,-0.54,0.04,2.73,1.1,0,">1 nonsynonymous","I104W R136L",2
"lib2","SARS-CoV-2","TAATGCACCATAACCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* I104V",2
"lib2","SARS-CoV-2","TAATGCACCCCCTAAT",1,48.32,10.86,0.02,0.07,2.91,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGCACTACTCCAG",21,1717.61,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F8T S129F N171K",3
"lib2","SARS-CoV-2","TAATGCAGTGGTTCTG",3,44.24,10.08,-0.76,0.08,2.51,1.02,0,"1 nonsynonymous","F47S",1
"lib2","SARS-CoV-2","TAATGCATCGCGAGAA",2,16.43,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","TAATGCATCGGGCTGC",7,55.53,6,-4.84,1.4,3,1.19,0.01,">1 nonsynonymous","G9S T55E K94Y Y143M F185L",5
"lib2","SARS-CoV-2","TAATGCATCTACATTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","TAATGCATGAATAGTG",6,47.6,9.19,-1.65,0.19,1.59,1.25,0.01,">1 nonsynonymous","E10L S45I T55F",3
"lib2","SARS-CoV-2","TAATGCCAATAAGCCC",2,29.15,10.53,-0.31,0.05,2.97,1,0,">1 nonsynonymous","D90W S200H",2
"lib2","SARS-CoV-2","TAATGCCATTTTTAGC",5,1.1,NA,NA,NA,NA,NA,NA,"stop","L60* P82* P149S",3
"lib2","SARS-CoV-2","TAATGCCCCTACTTAT",3,32.51,6.06,-4.77,1.07,3,1.29,0.02,">1 nonsynonymous","L5S P96I Y123D P149D",4
"lib2","SARS-CoV-2","TAATGCCCGTTTCAAC",3,2.16,NA,NA,NA,NA,NA,NA,"stop","C6G A18H F99R S129F Y175*",5
"lib2","SARS-CoV-2","TAATGCCTGCTCAGTA",5,47,10.06,-0.78,0.05,2.58,1.07,0,">1 nonsynonymous","T55M F134I",2
"lib2","SARS-CoV-2","TAATGCCTTTGACCAG",6,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S T15Q P82I",3
"lib2","SARS-CoV-2","TAATGCGAAACACTGC",1,6.72,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","G101R",1
"lib2","SARS-CoV-2","TAATGCGACTAATAAT",3,46.9,6,-4.84,1.32,1.5,1.1,0.01,">1 nonsynonymous","Y143S C158H",2
"lib2","SARS-CoV-2","TAATGCGAGTAATAGA",1,117.87,9.87,-0.97,0.05,2.18,1.01,0,">1 nonsynonymous","G9E A42H P54T Y178R",4
"lib2","SARS-CoV-2","TAATGCGCAAAAATCT",5,78.57,10.77,-0.07,0.04,2.93,1.09,0,">1 nonsynonymous","G51K T201L",2
"lib2","SARS-CoV-2","TAATGCGGTAGTTGTA",8,83.26,8.48,-2.36,0.25,1.5,1.07,0.03,">1 nonsynonymous","F47I G86D",2
"lib2","SARS-CoV-2","TAATGCGGTTAATTAA",1,1.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32G F44H S53F G101A S139E",5
"lib2","SARS-CoV-2","TAATGCTAAATGCTTA",9,4,NA,NA,NA,NA,NA,NA,"stop","F62* D68R G101*",3
"lib2","SARS-CoV-2","TAATGCTAGCAATGGA",2,22.29,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D75L P82S S139P",3
"lib2","SARS-CoV-2","TAATGCTATAAAAAAA",3,13.33,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T100L W106C Y119L G155C S184T T201A",6
"lib2","SARS-CoV-2","TAATGCTATATGTAGG",3,18.71,10.83,-0.01,0.06,2.95,1.05,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","TAATGCTGAGATGGCG",3,51.26,10.68,-0.16,0.04,2.86,1.13,0,">1 nonsynonymous","N4V D97N S129R",3
"lib2","SARS-CoV-2","TAATGCTGTACAACGT",1,14.45,6,-4.84,2,2.93,1.11,0,">1 nonsynonymous","S113Q G155V",2
"lib2","SARS-CoV-2","TAATGCTTATATGAAC",1,23.22,10.33,-0.51,0.06,2.99,1,0,">1 nonsynonymous","N4M A33F N107R",3
"lib2","SARS-CoV-2","TAATGCTTCATAGACT",5,29.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S43Q Y93E T140S",3
"lib2","SARS-CoV-2","TAATGGAACATCGAAA",10,201.99,9.62,-1.21,0.03,2.91,1.04,0,">1 nonsynonymous","K56E T170F S184Y",3
"lib2","SARS-CoV-2","TAATGGAAGAAGATAG",7,155.99,8.15,-2.68,0.11,1.67,1.1,0.01,">1 nonsynonymous","S113N E135M",2
"lib2","SARS-CoV-2","TAATGGAAGACGATAT",2,26.11,10.78,-0.06,0.09,2.89,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGGAAGTAAAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N W106R K128D",3
"lib2","SARS-CoV-2","TAATGGAATTATATCT",5,62.73,10.81,-0.02,0.06,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGGACGCTTGTTT",2,25.45,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L60I L95G",2
"lib2","SARS-CoV-2","TAATGGAGAAGTACGA",5,89.15,10.77,-0.07,0.05,2.93,1.1,0,">1 nonsynonymous","A14S N130R",2
"lib2","SARS-CoV-2","TAATGGAGAATAACGA",1,42.31,10.43,-0.41,0.05,2.83,1.07,0,">1 nonsynonymous","F62D K198M",2
"lib2","SARS-CoV-2","TAATGGAGAGAATGAG",1,19.51,10.55,-0.29,0.06,2.99,1.02,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","TAATGGAGTTTGAGGT",5,41.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H G86M Y91P",3
"lib2","SARS-CoV-2","TAATGGATACGATCAA",4,48.86,6,-4.84,2,3,1.24,0,">1 nonsynonymous","S43Y N58L P96L G152L F156P P169S T201S",7
"lib2","SARS-CoV-2","TAATGGATCCCACAAT",11,238.95,10.16,-0.68,0.03,2.8,1.04,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","TAATGGCACCGAGGAT",5,24.08,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","R16Y Y50S L95S V103Y F134C",5
"lib2","SARS-CoV-2","TAATGGCAGTAGAAAA",5,28.99,9.8,-1.04,0.1,2.5,1,0,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","TAATGGCCATGGTTAA",5,40.14,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","S43Y T100S S113R F134I",4
"lib2","SARS-CoV-2","TAATGGCCGCAGCAAT",11,67.37,6.2,-4.64,1.1,1.5,1.27,0.04,">1 nonsynonymous","L5H C49I Y91L",3
"lib2","SARS-CoV-2","TAATGGCGAGACTGTC",4,75.77,9.91,-0.93,0.08,2.76,1.07,0,">1 nonsynonymous","Y35S A145V",2
"lib2","SARS-CoV-2","TAATGGCTGCAAAAAA",2,41.66,8.42,-2.41,0.13,2.82,1,0.01,">1 nonsynonymous","T55L S113I",2
"lib2","SARS-CoV-2","TAATGGCTTGATGACA",12,0.91,NA,NA,NA,NA,NA,NA,"stop","Y35L D68C K114R R136N F167* Q168K",6
"lib2","SARS-CoV-2","TAATGGGCTCCATCTA",3,48.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F8T I28Y D112V R136S I142A G152I",6
"lib2","SARS-CoV-2","TAATGGGCTTTGTTTC",14,46.49,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68V R73T E141D",3
"lib2","SARS-CoV-2","TAATGGGGGAGGGCAA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","N24F S113*",2
"lib2","SARS-CoV-2","TAATGGGTACAAGTAC",3,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45N L57F P96W P197T",4
"lib2","SARS-CoV-2","TAATGGTATTACCAAT",10,198.91,10.08,-0.76,0.03,2.84,1.03,0,">1 nonsynonymous","N40V C61S",2
"lib2","SARS-CoV-2","TAATGGTCATACCAAA",6,142.59,10.34,-0.5,0.03,2.91,1.07,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TAATGGTCTTATCTGA",1,17.49,10.83,0,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATGGTTACAATTGG",8,1.27,NA,NA,NA,NA,NA,NA,"stop","D34R S43* P149Q S184F",4
"lib2","SARS-CoV-2","TAATGGTTCCAAAAGT",1,13.4,10.02,-0.82,0.07,2.95,1.04,0,">1 nonsynonymous","N1W Y119R T201R",3
"lib2","SARS-CoV-2","TAATGGTTTTAGAACA",7,58.74,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","G9N I88E A105G H189S",4
"lib2","SARS-CoV-2","TAATGTAAAAACAATG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","T15* K87W S113G P149G",4
"lib2","SARS-CoV-2","TAATGTAAGCCGCCGA",7,129.18,10.41,-0.43,0.04,2.86,1.1,0,">1 nonsynonymous","T55W E135R P197K",3
"lib2","SARS-CoV-2","TAATGTACAAATCTTT",1,7.6,6,-4.84,2,3,1,0,">1 nonsynonymous","G86H F126E E141H",3
"lib2","SARS-CoV-2","TAATGTACAATAATAT",1,87.91,8.8,-2.03,0.07,2.67,1.08,0,"1 nonsynonymous","Q176C",1
"lib2","SARS-CoV-2","TAATGTACGGGACCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2* K56V W106T S113W L188R",5
"lib2","SARS-CoV-2","TAATGTACTATATTCA",5,0.87,NA,NA,NA,NA,NA,NA,"stop","S36* N151K",2
"lib2","SARS-CoV-2","TAATGTATTCCGTCGA",8,207.12,10.36,-0.48,0.04,2.87,1.07,0,"1 nonsynonymous","Y178L",1
"lib2","SARS-CoV-2","TAATGTATTCGGGTGC",13,2.21,NA,NA,NA,NA,NA,NA,"stop","G9* N171P",2
"lib2","SARS-CoV-2","TAATGTATTGAATCAC",7,60.46,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","E76W N107R G155I",3
"lib2","SARS-CoV-2","TAATGTCAATAAAGCA",14,192.4,10.45,-0.39,0.03,2.91,1.05,0,">1 nonsynonymous","D90T N130T",2
"lib2","SARS-CoV-2","TAATGTCACGTCTGAT",2,1.31,NA,NA,NA,NA,NA,NA,"stop","A22P V37F A81* G166C",4
"lib2","SARS-CoV-2","TAATGTCATATATTCA",2,18.94,8.73,-2.1,0.25,1.77,1.15,0.02,">1 nonsynonymous","E10Q T15H S43Y T63H G152P",5
"lib2","SARS-CoV-2","TAATGTCCAATGTACG",3,46.76,10.71,-0.13,0.07,2.87,1.06,0,"1 nonsynonymous","F44H",1
"lib2","SARS-CoV-2","TAATGTCCTTGCTCTG",8,4.97,NA,NA,NA,NA,NA,NA,"stop","F17S S41T Y119* K128D E135W C150A",6
"lib2","SARS-CoV-2","TAATGTCGAAAATATA",12,195.05,10.51,-0.32,0.03,2.96,1.04,0,">1 nonsynonymous","N118E L188T",2
"lib2","SARS-CoV-2","TAATGTCGATTCAAGA",2,38.95,10.54,-0.29,0.05,2.95,1.05,0,">1 nonsynonymous","S45Q D90N N120R T201R",4
"lib2","SARS-CoV-2","TAATGTCGCAAACTAG",1,21.02,6,-4.84,1.57,3,1.15,0.01,"1 nonsynonymous","V20K",1
"lib2","SARS-CoV-2","TAATGTCGTGGGAGTT",4,29.51,8.83,-2.01,0.11,2.45,1.07,0,">1 nonsynonymous","S113G G155W",2
"lib2","SARS-CoV-2","TAATGTCTCTGATTTG",1,37.12,6.5,-4.34,0.47,1.5,1.12,0.02,">1 nonsynonymous","S36D Y66F S113Q G166W",4
"lib2","SARS-CoV-2","TAATGTCTTGAGTTAT",2,38.25,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","R73S S113F Y123R",3
"lib2","SARS-CoV-2","TAATGTGAAAAGAGGC",7,45.23,6,-4.84,0.69,2.39,1.15,0,">1 nonsynonymous","G155L F167L",2
"lib2","SARS-CoV-2","TAATGTGAACTAAGTT",8,123.79,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9K G51Y N58S G86D Y178G",5
"lib2","SARS-CoV-2","TAATGTGAACTTTCTG",3,73.93,8.48,-2.36,0.22,1.5,1.06,0.02,">1 nonsynonymous","I72A K128Y S184Q",3
"lib2","SARS-CoV-2","TAATGTGACAGTACCT",1,21.16,10.8,-0.03,0.07,3,1.03,0,"1 nonsynonymous","K199C",1
"lib2","SARS-CoV-2","TAATGTGACGCATGAC",6,66.45,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A33E Y91A Q144C T148K",4
"lib2","SARS-CoV-2","TAATGTGATGATTTAG",1,0.94,NA,NA,NA,NA,NA,NA,"stop","L95* V173M V180M",3
"lib2","SARS-CoV-2","TAATGTGGACGCTATG",3,134.44,10.25,-0.58,0.04,2.93,1.05,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","TAATGTGGCTAAACAA",2,16.35,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Q84W D90Y Q176P",3
"lib2","SARS-CoV-2","TAATGTTAATATTTCA",11,19.42,6.39,-4.44,0.82,1.5,1.18,0.05,"1 nonsynonymous","Y175P",1
"lib2","SARS-CoV-2","TAATGTTATCAAAGTT",2,7.38,10.72,-0.11,0.31,2.74,1.07,0.01,">1 nonsynonymous","T15P N64R",2
"lib2","SARS-CoV-2","TAATGTTATCTTGATA",5,39.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2W V103Y",2
"lib2","SARS-CoV-2","TAATGTTCAATCAAAA",16,163.55,10.8,-0.04,0.04,2.91,1.09,0,"1 nonsynonymous","A190N",1
"lib2","SARS-CoV-2","TAATGTTCACCACAAG",5,52.09,9.92,-0.91,0.12,1.94,1.13,0.01,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","TAATGTTCTGGGACAC",12,1.02,NA,NA,NA,NA,NA,NA,"stop","L5W L131K T201*",3
"lib2","SARS-CoV-2","TAATGTTGTACGATAC",7,89.65,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T46F L57S A89S D98K R136D Y165L",6
"lib2","SARS-CoV-2","TAATGTTTGGAAAGAC",2,21.05,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","P82F S113E",2
"lib2","SARS-CoV-2","TAATTAAAAATCCTCA",1,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83D Y93W V103H G146P S184K",5
"lib2","SARS-CoV-2","TAATTAAAACATTATT",7,108.07,10.74,-0.1,0.04,2.97,1.06,0,">1 nonsynonymous","L5T I104M",2
"lib2","SARS-CoV-2","TAATTAAAATACGTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S F62A A105S L122V I138L T148K Q176N",7
"lib2","SARS-CoV-2","TAATTAAAATCCTTCC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","L60* K94R L162Q",3
"lib2","SARS-CoV-2","TAATTAAACGTGGCCA",2,23.8,9.7,-1.14,0.14,2.17,1.24,0.01,">1 nonsynonymous","T15D D34G V173A",3
"lib2","SARS-CoV-2","TAATTAAACTACCCAG",5,24.51,8.58,-2.26,0.11,2.26,1.02,0.01,">1 nonsynonymous","D75L D97R P169I",3
"lib2","SARS-CoV-2","TAATTAAAGATACGAG",3,42.84,9.25,-1.58,0.07,2.04,1.05,0,">1 nonsynonymous","N4M E10K P177A",3
"lib2","SARS-CoV-2","TAATTAACAACTTAGA",4,9.52,9.9,-0.93,0.3,1.5,1,0.04,"1 nonsynonymous","G101C",1
"lib2","SARS-CoV-2","TAATTAACAAGTGAAA",1,18.39,10.28,-0.55,0.15,2.71,1.08,0.01,">1 nonsynonymous","S19A P191V",2
"lib2","SARS-CoV-2","TAATTAACCGATGCTT",7,9.43,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","K94L V103S",2
"lib2","SARS-CoV-2","TAATTAACGAAAGTCA",6,0.09,NA,NA,NA,NA,NA,NA,"stop","V11H L38N D137*",3
"lib2","SARS-CoV-2","TAATTAAGATAGCTAG",3,22.95,9.31,-1.53,0.23,1.75,1.25,0.02,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","TAATTAAGATTATCCA",9,72.57,6.05,-4.78,0.7,1.5,1.15,0.01,">1 nonsynonymous","K26L S36C D68T",3
"lib2","SARS-CoV-2","TAATTAATAAACAGCA",7,0.27,NA,NA,NA,NA,NA,NA,"stop","V20F Y39T T46* T100S N120F",5
"lib2","SARS-CoV-2","TAATTAATAAGTTTTT",2,1.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47Y P96R T201W",3
"lib2","SARS-CoV-2","TAATTAATAATCGCAA",3,66.35,10.83,0,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTAATATAAAACC",7,3.46,NA,NA,NA,NA,NA,NA,"stop","I2W S19* L125K P149H",4
"lib2","SARS-CoV-2","TAATTAATCTCGGTTT",2,58.82,9.9,-0.94,0.08,2.91,1.06,0,">1 nonsynonymous","T100M T170F",2
"lib2","SARS-CoV-2","TAATTAATCTGATTGT",3,70.09,9.85,-0.99,0.09,2.12,1.09,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","TAATTAATCTTGCTAA",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K N64R G83P D112N",4
"lib2","SARS-CoV-2","TAATTAATGAATAAAC",3,51.41,10.59,-0.24,0.04,2.96,1.05,0,">1 nonsynonymous","N13Y P197Q T201R",3
"lib2","SARS-CoV-2","TAATTAATGCGATTGT",8,0.06,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TAATTAATGCTTGGGA",6,69.85,6,-4.84,1.46,1.5,1.22,0.02,">1 nonsynonymous","W23I N40K P54Y C158P",4
"lib2","SARS-CoV-2","TAATTAATGGATCCGG",4,0.12,NA,NA,NA,NA,NA,NA,"stop","T3D V37* K56M S164L Y178R",5
"lib2","SARS-CoV-2","TAATTAATTTCGCACG",9,151.11,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","E154Y G172V",2
"lib2","SARS-CoV-2","TAATTACAAGAAAAAA",14,3.56,NA,NA,NA,NA,NA,NA,"stop","G116* R124T F156M",3
"lib2","SARS-CoV-2","TAATTACACAGGGCGG",4,0.52,NA,NA,NA,NA,NA,NA,"stop","F17R L60*",2
"lib2","SARS-CoV-2","TAATTACAGGCTATCC",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* P54Y V77D Y93D I142T P169A",6
"lib2","SARS-CoV-2","TAATTACCAAACAACA",3,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47T E135R P149S A190S",4
"lib2","SARS-CoV-2","TAATTACCAAGGAAGT",6,3.99,NA,NA,NA,NA,NA,NA,"stop","V11* I88V R136T T201S",4
"lib2","SARS-CoV-2","TAATTACCTATTGGGG",1,51.44,10.5,-0.34,0.05,2.9,1.06,0,">1 nonsynonymous","N13G N58E T201C",3
"lib2","SARS-CoV-2","TAATTACGCCGAACAA",3,25.1,9.79,-1.05,0.06,2.69,1.08,0,">1 nonsynonymous","S43Y L60I N107A T201S",4
"lib2","SARS-CoV-2","TAATTACGCTTACGAG",7,110.02,10.08,-0.76,0.05,3,1,0,">1 nonsynonymous","C6G A33E",2
"lib2","SARS-CoV-2","TAATTACGTAACTCAA",1,31.58,9.54,-1.3,0.1,1.89,1.06,0,">1 nonsynonymous","N30R T100D",2
"lib2","SARS-CoV-2","TAATTACTCAATGTTA",6,69.19,10.73,-0.11,0.06,2.84,1.08,0,">1 nonsynonymous","N4V L122F K198N",3
"lib2","SARS-CoV-2","TAATTACTCATTAAAT",8,137.21,9.73,-1.11,0.03,2.99,1.03,0,">1 nonsynonymous","P7H I28L V37M Q168E",4
"lib2","SARS-CoV-2","TAATTACTCGAAGAAT",1,26.3,10.9,0.06,0.07,2.95,1.05,0,"1 nonsynonymous","K199Y",1
"lib2","SARS-CoV-2","TAATTACTTTAAGAAT",1,9.26,11.05,0.22,0.06,3,1,0,"1 nonsynonymous","I2H",1
"lib2","SARS-CoV-2","TAATTAGAAAGGAGAG",6,120.14,10.53,-0.31,0.03,2.9,1.05,0,">1 nonsynonymous","N13K T201H",2
"lib2","SARS-CoV-2","TAATTAGAACCCTTCA",18,141.48,10.83,-0.01,0.04,2.9,1.1,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","TAATTAGAACTCCTCC",11,135.57,10.79,-0.05,0.05,2.82,1.16,0,">1 nonsynonymous","I2S F17W T140R",3
"lib2","SARS-CoV-2","TAATTAGAAGTCAACT",1,5.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W D98E C195R",3
"lib2","SARS-CoV-2","TAATTAGAGAGCTACG",3,46.61,10.46,-0.38,0.07,2.91,1.04,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","TAATTAGATCGCACAA",23,2997.21,10.79,-0.04,0.03,2.97,1.05,0,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","TAATTAGATGACATAA",1,271.61,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6Y S69V F167L",3
"lib2","SARS-CoV-2","TAATTAGCCTTATCCT",1,69.07,9.75,-1.09,0.04,2.93,1.08,0,">1 nonsynonymous","A42S Y121L G155A L188I T201Y",5
"lib2","SARS-CoV-2","TAATTAGCGGTCAAAG",8,19.91,7.69,-3.15,0.3,1.5,1.09,0.04,">1 nonsynonymous","V37P G83P D90T D112L Y119V",5
"lib2","SARS-CoV-2","TAATTAGGAACCGTGA",9,69.36,10.75,-0.09,0.04,2.96,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TAATTAGGACCGAAGG",2,13.36,10.4,-0.43,0.13,2.82,1,0.01,">1 nonsynonymous","S69R Y175W",2
"lib2","SARS-CoV-2","TAATTAGGACGACCTA",2,13.77,10.82,-0.01,0.27,2.71,1.14,0.02,"wildtype","",0
"lib2","SARS-CoV-2","TAATTAGGGTTTTAAT",1,12.69,10.82,-0.02,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTAGGTAGGGCAA",12,51.02,6.28,-4.55,0.72,1.5,1.15,0.04,">1 nonsynonymous","I88N L188I",2
"lib2","SARS-CoV-2","TAATTAGTCGACCACG",6,145.34,10.84,0.01,0.05,2.95,1.08,0,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","TAATTATAAACTCATT",4,69.09,10.74,-0.1,0.04,3,1.04,0,"1 nonsynonymous","V32N",1
"lib2","SARS-CoV-2","TAATTATAACGTGGTC",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M K56S D90L F99R",4
"lib2","SARS-CoV-2","TAATTATAAGTCGGAA",2,27.27,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","D34K V65T A81L",3
"lib2","SARS-CoV-2","TAATTATAATAGGTTG",7,54.07,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F62L L95P L122E",3
"lib2","SARS-CoV-2","TAATTATCAAACCTAA",5,1.34,NA,NA,NA,NA,NA,NA,"stop","F8* T15W L60S I72A A105R Y175G",6
"lib2","SARS-CoV-2","TAATTATCCAGAGATA",2,22.41,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","A67S G83P Y119S Q168I",4
"lib2","SARS-CoV-2","TAATTATCCGCTAGAA",5,47.76,10.83,-0.01,0.05,2.95,1.08,0,">1 nonsynonymous","S147V F160N",2
"lib2","SARS-CoV-2","TAATTATCGAACAGGA",1,32.52,10.23,-0.61,0.09,2.04,1,0,"1 nonsynonymous","E76V",1
"lib2","SARS-CoV-2","TAATTATCTAATCAAG",5,0.54,NA,NA,NA,NA,NA,NA,"stop","N120S Y175*",2
"lib2","SARS-CoV-2","TAATTATGAAGTGTAA",3,24.57,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","G83N N107V R127L",3
"lib2","SARS-CoV-2","TAATTATGCAAGTATA",10,44.82,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","C61I N157V C158R",3
"lib2","SARS-CoV-2","TAATTATGCCCTCACC",8,102.3,8.25,-2.58,0.09,2.38,1.07,0,">1 nonsynonymous","V37I K48R G146L",3
"lib2","SARS-CoV-2","TAATTATGCTTTCTAG",2,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S F70C A105E",3
"lib2","SARS-CoV-2","TAATTATGGCCAGTAG",8,80.57,9.25,-1.58,0.18,1.5,1.07,0.02,">1 nonsynonymous","S19K D90R",2
"lib2","SARS-CoV-2","TAATTATTGATGAATC",2,63.21,7.87,-2.96,0.22,1.5,1.11,0.01,"1 nonsynonymous","Q176Y",1
"lib2","SARS-CoV-2","TAATTCAAGATACTAG",13,190.45,10.71,-0.12,0.02,2.97,1.03,0,"1 nonsynonymous","P149F",1
"lib2","SARS-CoV-2","TAATTCAAGCACTATG",3,22.92,7.14,-3.69,0.35,1.5,1.06,0.03,">1 nonsynonymous","D34V K48Y L60I Q84R",4
"lib2","SARS-CoV-2","TAATTCAAGTCTGCAG",18,141.73,6.58,-4.25,0.23,1.5,1.15,0.01,">1 nonsynonymous","C61G F167M",2
"lib2","SARS-CoV-2","TAATTCAAGTGATGGA",4,111.81,10.51,-0.32,0.06,2.91,1.1,0,">1 nonsynonymous","S41C K114E",2
"lib2","SARS-CoV-2","TAATTCAATAAAATAA",1,7.86,9.77,-1.07,0.16,2.23,1,0.01,">1 nonsynonymous","K26L Y35M S69W D90N G152N",5
"lib2","SARS-CoV-2","TAATTCAATATGACAA",2,6.68,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","K48T V77A I88S N118M F167L",5
"lib2","SARS-CoV-2","TAATTCACCAAAGCCA",8,28.55,8.87,-1.97,0.15,1.81,1.04,0.01,">1 nonsynonymous","Y50C V77L",2
"lib2","SARS-CoV-2","TAATTCACCATTCACT",9,95.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9K G86H Y119S S129D R136P G146R T201L",7
"lib2","SARS-CoV-2","TAATTCAGCAGCATCA",7,2.69,NA,NA,NA,NA,NA,NA,"stop","V37* C61Y I88R D97N Q144*",5
"lib2","SARS-CoV-2","TAATTCAGCCCAAAAT",3,60.01,10.62,-0.21,0.08,2.86,1.17,0,"1 nonsynonymous","N151F",1
"lib2","SARS-CoV-2","TAATTCATAAACGTGC",5,56.69,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G86N G101Y",2
"lib2","SARS-CoV-2","TAATTCATAGTGTCGC",2,25.61,10.95,0.12,0.07,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTCATATAAGTAT",3,30.7,9.1,-1.74,0.28,1.5,1,0.04,">1 nonsynonymous","L38R A81E",2
"lib2","SARS-CoV-2","TAATTCCAAATTGGTT",1,39.96,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","Y35V S53N P82Q C150Q G174R",5
"lib2","SARS-CoV-2","TAATTCCAATCACAAG",7,27.17,9.38,-1.46,0.31,1.5,1.03,0.05,">1 nonsynonymous","A42D V103W",2
"lib2","SARS-CoV-2","TAATTCCAATCTATAC",12,26.42,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S45T N92S C102W",3
"lib2","SARS-CoV-2","TAATTCCACTACCATT",5,135.42,10.67,-0.17,0.03,2.92,1.06,0,">1 nonsynonymous","T55I G83Y",2
"lib2","SARS-CoV-2","TAATTCCGCTGTAGAA",4,34.7,6,-4.84,2,3,1.22,0,"1 nonsynonymous","W106P",1
"lib2","SARS-CoV-2","TAATTCCTGTCTCGCC",10,142.59,9.6,-1.24,0.03,2.94,1.07,0,">1 nonsynonymous","V37N Y119F E141T",3
"lib2","SARS-CoV-2","TAATTCGAGAAGTTAA",3,1.25,NA,NA,NA,NA,NA,NA,"stop","G9M C49G T140*",3
"lib2","SARS-CoV-2","TAATTCGTAGAAAAAG",2,85.27,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A89L G155S",2
"lib2","SARS-CoV-2","TAATTCGTTAATTATA",10,24.33,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F8V C49S",2
"lib2","SARS-CoV-2","TAATTCTAATTCAAAT",4,54.43,10.86,0.02,0.07,2.97,1.04,0,"1 nonsynonymous","S200G",1
"lib2","SARS-CoV-2","TAATTCTATATAGCCA",2,8.66,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L95M G101D",2
"lib2","SARS-CoV-2","TAATTCTCAACATATA",9,124.75,6.77,-4.07,0.35,1.5,1.21,0.02,">1 nonsynonymous","D34R T148E L162R",3
"lib2","SARS-CoV-2","TAATTCTCACGATGCC",3,0.26,NA,NA,NA,NA,NA,NA,"stop","D90L W106C R136*",3
"lib2","SARS-CoV-2","TAATTCTCAGCTGACA",3,20.15,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","K48I G101S S129F",3
"lib2","SARS-CoV-2","TAATTCTGCACTCAGT",7,6.44,NA,NA,NA,NA,NA,NA,"stop","S19M R124Q Y143K G174* T201L",5
"lib2","SARS-CoV-2","TAATTCTGGCCTATGG",2,18.37,9.92,-0.91,0.1,2.5,1,0,">1 nonsynonymous","L5K S43R K132I G146W",4
"lib2","SARS-CoV-2","TAATTCTTGCAAATTT",1,24.3,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","V20K L38I Q79R I88T",4
"lib2","SARS-CoV-2","TAATTGAAAACGTGAA",11,106.6,9.29,-1.55,0.17,1.6,1.11,0.01,">1 nonsynonymous","L57G A81V",2
"lib2","SARS-CoV-2","TAATTGAAACACAGCT",5,72,9.78,-1.06,0.05,2.9,1.08,0,">1 nonsynonymous","T100N Y121H G174D",3
"lib2","SARS-CoV-2","TAATTGAAATCATCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","T15* N58S D112E Y119V L162N",5
"lib2","SARS-CoV-2","TAATTGAACCCAACAA",1,12.33,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C6Q S41R C61D G146L G172R",5
"lib2","SARS-CoV-2","TAATTGAAGGCTAAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","S36H D90*",2
"lib2","SARS-CoV-2","TAATTGACAAACAAAA",10,56.38,9.38,-1.45,0.07,1.96,1.04,0,">1 nonsynonymous","F44L A67S",2
"lib2","SARS-CoV-2","TAATTGACGATCAATA",7,0.94,NA,NA,NA,NA,NA,NA,"stop","N110* Y175Q R179W",3
"lib2","SARS-CoV-2","TAATTGATACACTTAA",9,171.42,8.27,-2.56,0.12,2.77,1.11,0.01,">1 nonsynonymous","K132S Y175A",2
"lib2","SARS-CoV-2","TAATTGATATAAATCA",3,84.05,9.47,-1.36,0.06,2.97,1.03,0,">1 nonsynonymous","Y35L K87I Y119R",3
"lib2","SARS-CoV-2","TAATTGATATTTACAA",10,54.71,8.3,-2.53,0.25,1.5,1.01,0.03,">1 nonsynonymous","K94G E141W",2
"lib2","SARS-CoV-2","TAATTGCAAGTGGATA",8,49.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21R S43C D97L",3
"lib2","SARS-CoV-2","TAATTGCCAACTCATA",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92G S139A P191Y",3
"lib2","SARS-CoV-2","TAATTGCGAACAGAGT",3,55.93,9.99,-0.84,0.06,2.78,1,0,">1 nonsynonymous","A67V D90A P149T T201Q",4
"lib2","SARS-CoV-2","TAATTGCTACAAAGCA",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61I A89T D97I P133M",4
"lib2","SARS-CoV-2","TAATTGGAACTACCGC",2,28.39,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K94S C158I",2
"lib2","SARS-CoV-2","TAATTGGATGCGGGTT",6,59.69,10.85,0.01,0.06,2.89,1.12,0,"1 nonsynonymous","F160H",1
"lib2","SARS-CoV-2","TAATTGGCTCCCCCAT",9,96.23,10.84,0,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTGGTATGGGTAC",1,30.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R27W N120M P177Q",3
"lib2","SARS-CoV-2","TAATTGGTGTCGTTAT",4,30.95,10.64,-0.19,0.08,2.69,1.33,0,">1 nonsynonymous","N4M T55M",2
"lib2","SARS-CoV-2","TAATTGTATCAATTAG",19,9.63,NA,NA,NA,NA,NA,NA,"stop","A105* G146A Y165F",3
"lib2","SARS-CoV-2","TAATTGTCCGATACAT",9,46.24,7.12,-3.72,0.26,1.5,1.15,0.02,">1 nonsynonymous","G9Q K48S N118M G152C",4
"lib2","SARS-CoV-2","TAATTGTGGTCCAGTT",1,40.44,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3S S139F G146I",3
"lib2","SARS-CoV-2","TAATTGTGTCGGAGTG",5,95.28,10.84,0,0.05,2.84,1.17,0,"1 nonsynonymous","P197V",1
"lib2","SARS-CoV-2","TAATTGTTCTAACGCA",1,6.15,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","S53Q N92V P169V V182F",4
"lib2","SARS-CoV-2","TAATTGTTGGACTAGA",5,36.97,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","G51P K56G I88P",3
"lib2","SARS-CoV-2","TAATTGTTGTCTCTTA",9,40.88,6.88,-3.95,0.37,1.5,1.19,0.02,">1 nonsynonymous","R16I T100C Y119L R136F",4
"lib2","SARS-CoV-2","TAATTTAACATGATAT",2,0.53,NA,NA,NA,NA,NA,NA,"stop","L5T A14P N40V G74C V77R V103S S113Q S147L Y178*",9
"lib2","SARS-CoV-2","TAATTTAACATGGTCC",4,2.44,NA,NA,NA,NA,NA,NA,"stop","F99T N110D P149K S184* T201R",5
"lib2","SARS-CoV-2","TAATTTAACGGGTGAA",6,1.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22I Y39W S113R N120Y F156V",5
"lib2","SARS-CoV-2","TAATTTAACTCACCAT",2,33.06,6,-4.84,1.45,1.5,1.07,0.01,">1 nonsynonymous","L38C N110D Q144R N157L F167L",5
"lib2","SARS-CoV-2","TAATTTACAAACGGAG",3,46.51,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3Y V37T C49L S69E K114R Y123F Y143F",7
"lib2","SARS-CoV-2","TAATTTACCCCATGTC",2,41.53,9.89,-0.95,0.12,2.12,1.06,0.01,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","TAATTTAGATACCAGA",13,121.83,10.85,0.01,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTAGCTAAAAGA",2,6.37,11.14,0.3,0.16,2.96,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTAGCTCATACA",1,14.54,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","N1C Y121I G146M",3
"lib2","SARS-CoV-2","TAATTTAGGGAGATTA",20,185.2,9.53,-1.31,0.06,1.99,1.05,0,">1 nonsynonymous","S139R Y178L A192T",3
"lib2","SARS-CoV-2","TAATTTATCACCAGGT",1,12.8,9.51,-1.33,0.2,2.41,1.13,0.02,">1 nonsynonymous","C61R D75T I138H",3
"lib2","SARS-CoV-2","TAATTTATCAGCTAAT",7,41.32,8.23,-2.6,0.09,2.28,1.06,0,">1 nonsynonymous","S69M Y119K T170N",3
"lib2","SARS-CoV-2","TAATTTATGTGCTAAG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","A33G F44* N64D A105H S113G F134M G152I T170L",8
"lib2","SARS-CoV-2","TAATTTATTGGATCAA",4,27.77,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L38M F99L G155C",3
"lib2","SARS-CoV-2","TAATTTCAAAGCGACT",1,11.98,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2E F47C A105L",3
"lib2","SARS-CoV-2","TAATTTCAATATAGAT",2,1.19,NA,NA,NA,NA,NA,NA,"stop","F17M N30A S53K Y91* D97V N107G R179G",7
"lib2","SARS-CoV-2","TAATTTCACCCTATGA",4,56.15,10.28,-0.56,0.07,2.81,1.1,0,">1 nonsynonymous","L5A E10Y",2
"lib2","SARS-CoV-2","TAATTTCACCGGCTTG",5,18.05,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TAATTTCCAGAATGAA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G146K F167R",2
"lib2","SARS-CoV-2","TAATTTCCCAAGCGTA",3,1.99,NA,NA,NA,NA,NA,NA,"stop","I2C V37* N58K S200K",4
"lib2","SARS-CoV-2","TAATTTCCCCCTAAGG",3,41.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44A P177R",2
"lib2","SARS-CoV-2","TAATTTCGAAAAGGTG",6,165.69,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86I A145S Q176S",3
"lib2","SARS-CoV-2","TAATTTCGAGATTAAT",2,20.92,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V71N P96Q T100V V103L E154G A190S",6
"lib2","SARS-CoV-2","TAATTTCTAGTAATTA",2,29.71,10.75,-0.08,0.07,2.95,1.05,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","TAATTTCTTCCTGAAT",3,60.96,10.79,-0.05,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTGAAAAAAAAG",5,0.32,NA,NA,NA,NA,NA,NA,"stop","G9K Y35K L95N S184* S200K",5
"lib2","SARS-CoV-2","TAATTTGAAAAAACTG",1,15.91,9.52,-1.32,0.18,1.86,1.04,0.01,">1 nonsynonymous","Y66T N107T",2
"lib2","SARS-CoV-2","TAATTTGAATCATACA",2,15.31,10.3,-0.53,0.09,2.64,1.3,0,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","TAATTTGACCTTGCAC",2,119.75,10.86,0.03,0.04,2.92,1.08,0,">1 nonsynonymous","T100V N151G",2
"lib2","SARS-CoV-2","TAATTTGATGTTCCGG",2,43,10.56,-0.28,0.06,2.98,1.02,0,">1 nonsynonymous","A14Q P54V C61T A190T",4
"lib2","SARS-CoV-2","TAATTTGATTCTCCGC",10,126.81,10.7,-0.13,0.02,2.95,1.06,0,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","TAATTTGCGCTTCAAG",2,2.02,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTGCTATACAAA",3,30.7,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L38R I104L I142R",3
"lib2","SARS-CoV-2","TAATTTGCTTATATCC",4,61.28,10.83,-0.01,0.05,2.97,1.05,0,"1 nonsynonymous","S53I",1
"lib2","SARS-CoV-2","TAATTTGGAATATCAT",9,126.44,8.38,-2.45,0.12,2.78,1.06,0.01,">1 nonsynonymous","T55D N64L D90Q G117D G174N",5
"lib2","SARS-CoV-2","TAATTTGTAGCCCAAA",17,317.33,10.86,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTGTATACCTTG",1,30.73,8.19,-2.64,0.13,1.59,1.02,0.01,">1 nonsynonymous","V11M Y165L",2
"lib2","SARS-CoV-2","TAATTTGTGGAAGGAG",1,3.51,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4F",1
"lib2","SARS-CoV-2","TAATTTGTTAAAGGGA",8,123.33,10.43,-0.41,0.05,2.88,1.08,0,">1 nonsynonymous","P96D N120E",2
"lib2","SARS-CoV-2","TAATTTTAAGACATCC",8,123.87,10.82,-0.01,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAATTTTAAGCAACCC",1,4.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R V180N",2
"lib2","SARS-CoV-2","TAATTTTACGTAGACT",3,20.41,6,-4.84,0.44,1.5,1.06,0,">1 nonsynonymous","F17M I72E W106C",3
"lib2","SARS-CoV-2","TAATTTTCCTATAAAG",7,45.62,10.03,-0.8,0.05,2.75,1.01,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","TAATTTTCTAGTTCAT",4,18.54,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","T15D A81M C150G",3
"lib2","SARS-CoV-2","TACAAAAAAAATAGGA",3,18.52,10.91,0.08,0.04,2.93,1.08,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","TACAAAAAAATCTTTG",11,133.44,10.25,-0.59,0.04,2.8,1.07,0,"1 nonsynonymous","T15F",1
"lib2","SARS-CoV-2","TACAAAAAACTAATTT",7,178.46,10.39,-0.45,0.03,2.92,1.03,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","TACAAAAACCAGTGCA",3,46.28,7.14,-3.69,0.2,1.5,1.09,0.01,">1 nonsynonymous","C61Q N107I P149R",3
"lib2","SARS-CoV-2","TACAAAAACGCTCGAG",5,175.99,10.3,-0.54,0.04,2.88,1.06,0,">1 nonsynonymous","E10K S53A D90R",3
"lib2","SARS-CoV-2","TACAAAAACTGGTCCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V W23R D90S I138Q T201Y",5
"lib2","SARS-CoV-2","TACAAAAAGAAGTCAA",7,218.66,10.11,-0.72,0.03,2.97,1.05,0,">1 nonsynonymous","R78H Q163E",2
"lib2","SARS-CoV-2","TACAAAAAGGCAATTC",16,59.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L60R N92L L122Q N130Q C158R",5
"lib2","SARS-CoV-2","TACAAAAATAAAATGG",2,18.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I28R D68E",2
"lib2","SARS-CoV-2","TACAAAAATCTGTATC",1,25.29,10.15,-0.68,0.08,2.79,1.06,0,">1 nonsynonymous","K132G Y178S",2
"lib2","SARS-CoV-2","TACAAAAATGATTAGC",4,41.18,9.29,-1.54,0.19,1.62,1.1,0.01,">1 nonsynonymous","A14W S129L",2
"lib2","SARS-CoV-2","TACAAAAATTCCACAT",5,30.37,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","K48L G101D P169H",3
"lib2","SARS-CoV-2","TACAAAACAAAAAACC",2,11.41,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K94A R179M",2
"lib2","SARS-CoV-2","TACAAAACATAAAACA",2,5.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","TACAAAACATACCTAA",9,108.93,9.86,-0.97,0.09,2.25,1.09,0,">1 nonsynonymous","A22W K128L",2
"lib2","SARS-CoV-2","TACAAAACATCGATAT",1,2.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A L95A",2
"lib2","SARS-CoV-2","TACAAAACCCATAAAA",8,33.7,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","S19L G117S L125P Q144V F160S",5
"lib2","SARS-CoV-2","TACAAAACCTGTGGAA",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C158V L183M",2
"lib2","SARS-CoV-2","TACAAAACTAGACATA",9,56.97,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K87Y L95E",2
"lib2","SARS-CoV-2","TACAAAACTGAGCCAG",3,47.84,8.83,-2.01,0.09,2.91,1.09,0,"1 nonsynonymous","S113V",1
"lib2","SARS-CoV-2","TACAAAACTGCCTTTA",8,88.58,10.79,-0.05,0.06,2.89,1.09,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","TACAAAAGAAACGGTA",5,99.61,10.76,-0.08,0.08,2.84,1.11,0,">1 nonsynonymous","T3K R78H",2
"lib2","SARS-CoV-2","TACAAAAGAAGAACAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3H",1
"lib2","SARS-CoV-2","TACAAAAGCAGGCCTA",11,272.45,10,-0.84,0.04,2.94,1.06,0,">1 nonsynonymous","T55S G116N E154D",3
"lib2","SARS-CoV-2","TACAAAAGGAAAAAAA",1,26.21,10.93,0.09,0.06,2.84,1.15,0,"1 nonsynonymous","L122G",1
"lib2","SARS-CoV-2","TACAAAAGTATATGAA",13,65.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17Q S41L D75G I138S",4
"lib2","SARS-CoV-2","TACAAAATAAAAAGAC",1,19.15,10.81,-0.03,0.1,2.85,1.16,0.01,"1 nonsynonymous","V115R",1
"lib2","SARS-CoV-2","TACAAAATAAATATAT",2,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F G83Q D112R L131S",4
"lib2","SARS-CoV-2","TACAAAATCCGAATTA",6,70.94,6.74,-4.1,0.47,1.5,1.36,0.03,">1 nonsynonymous","N4Y A18K G146W C150Y P161L K199I",6
"lib2","SARS-CoV-2","TACAAAATGACCCAAT",11,99.33,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25S F62L I72A P82L",4
"lib2","SARS-CoV-2","TACAAAATTAACGCCT",4,35.15,9.16,-1.68,0.12,1.85,1.06,0.01,"1 nonsynonymous","L122P",1
"lib2","SARS-CoV-2","TACAAAATTACAGATC",12,34.48,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","Y50N T140W",2
"lib2","SARS-CoV-2","TACAAAATTTCAAAAT",10,72.34,10.69,-0.15,0.03,2.9,1.06,0,">1 nonsynonymous","G9F Y35L",2
"lib2","SARS-CoV-2","TACAAACAAAAATCAT",2,1.75,NA,NA,NA,NA,NA,NA,"stop","N4V C61Y D98* D112Y K128F",5
"lib2","SARS-CoV-2","TACAAACAACGCACCC",9,52.6,8.84,-1.99,0.27,1.61,1.11,0.03,">1 nonsynonymous","N4K Y21V P133H",3
"lib2","SARS-CoV-2","TACAAACAATGACGAT",2,37.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2D S36L E141P Q176R H189C",5
"lib2","SARS-CoV-2","TACAAACAATTCCATC",10,37.78,9.01,-1.83,0.09,1.95,1.05,0,">1 nonsynonymous","P133H E154W S200I",3
"lib2","SARS-CoV-2","TACAAACATAGTAATA",2,47.17,6,-4.84,1.45,1.5,1.11,0.01,"1 nonsynonymous","C158P",1
"lib2","SARS-CoV-2","TACAAACATCATGAAT",6,59.16,10.81,-0.03,0.05,3,1.02,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","TACAAACCAAGGTACG",3,46.84,9.65,-1.18,0.06,2.97,1.05,0,">1 nonsynonymous","C61N N171L",2
"lib2","SARS-CoV-2","TACAAACCAATAAGAA",1,15.2,10.2,-0.63,0.16,2.34,1.03,0.01,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","TACAAACCACCATCTT",13,96.14,10.79,-0.05,0.06,2.87,1.15,0,">1 nonsynonymous","L5M T201A",2
"lib2","SARS-CoV-2","TACAAACCACCGCCGA",14,127.66,10.75,-0.08,0.05,2.94,1.07,0,">1 nonsynonymous","L122E T201R",2
"lib2","SARS-CoV-2","TACAAACCAGTTGACA",19,80.93,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y35N L95W Y165R N171F",4
"lib2","SARS-CoV-2","TACAAACCTCAATTGC",1,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V D97M F185V",3
"lib2","SARS-CoV-2","TACAAACCTGTAAGAG",1,26.37,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","S41L P82T N157Y S164T",4
"lib2","SARS-CoV-2","TACAAACGAATCTAAT",1,54.2,8.24,-2.6,0.15,2.17,1.12,0.01,">1 nonsynonymous","G146P F156R",2
"lib2","SARS-CoV-2","TACAAACGATAGTGGT",1,58.64,10.65,-0.18,0.03,2.94,1.06,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TACAAACGCCCTCATT",6,81.74,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D34W D68L L125D Y143P R179G",5
"lib2","SARS-CoV-2","TACAAACGTGCACCCG",7,55.08,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C31T N58V K87C Y93A R136N P197F",6
"lib2","SARS-CoV-2","TACAAACTAAACAACA",2,7.41,10.75,-0.09,0.07,2.86,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAAACTACATGGGA",3,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I G101A S129V C150M",4
"lib2","SARS-CoV-2","TACAAACTCTCTATAC",1,34.69,8.43,-2.41,0.13,2.24,1.1,0.01,">1 nonsynonymous","P54M G146L",2
"lib2","SARS-CoV-2","TACAAACTGAAACGAG",9,137.13,10.23,-0.61,0.04,2.79,1.06,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","TACAAACTTGAAGATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","TACAAACTTGACACTT",5,152.78,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6V T85M Q176S",3
"lib2","SARS-CoV-2","TACAAAGAAACCATGT",4,64.79,10.85,0.01,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAAAGATACACCGT",2,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P T55A L60K A145L",4
"lib2","SARS-CoV-2","TACAAAGATGAATGTT",6,146.51,10.28,-0.56,0.05,2.9,1.08,0,"1 nonsynonymous","E154H",1
"lib2","SARS-CoV-2","TACAAAGATGTTGAAC",2,54.85,7.35,-3.49,0.13,2.1,1.1,0.01,">1 nonsynonymous","L60T Y175D",2
"lib2","SARS-CoV-2","TACAAAGGACGATGAA",15,0.7,NA,NA,NA,NA,NA,NA,"stop","I2N T55S E76G D90I D112* T201H",6
"lib2","SARS-CoV-2","TACAAAGGATATATAC",2,68.82,10.07,-0.76,0.03,2.88,1.07,0,">1 nonsynonymous","L5F E10T T15E N120Q F156P",5
"lib2","SARS-CoV-2","TACAAAGGCATCAGAT",11,109.94,10.13,-0.71,0.1,2.26,1.08,0,">1 nonsynonymous","T3Q K26S Q84L",3
"lib2","SARS-CoV-2","TACAAAGGTAAACATA",7,7.07,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","F12S T85K V103P P149Q",4
"lib2","SARS-CoV-2","TACAAAGGTTTCCAAT",8,31.04,6,-4.84,2,1.5,1.3,0.06,"1 nonsynonymous","L95E",1
"lib2","SARS-CoV-2","TACAAAGTACTCTGGA",8,51.01,9.47,-1.36,0.14,1.8,1.09,0.01,">1 nonsynonymous","V37T F44S D90S D97N S184N",5
"lib2","SARS-CoV-2","TACAAAGTAGGCAGAG",2,25.09,9.05,-1.79,0.09,2.37,1,0,">1 nonsynonymous","C61R N107M",2
"lib2","SARS-CoV-2","TACAAAGTTAATATGA",4,20.66,9.68,-1.16,0.14,1.9,1.05,0.01,">1 nonsynonymous","A67T Q84W",2
"lib2","SARS-CoV-2","TACAAAGTTGCCGGAT",6,0.28,NA,NA,NA,NA,NA,NA,"stop","F62R Y119I T140* S184Y",4
"lib2","SARS-CoV-2","TACAAATAAAAAAAAA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S D98M",2
"lib2","SARS-CoV-2","TACAAATAAGCATCAA",3,25.44,8.99,-1.85,0.15,1.82,1.22,0.01,">1 nonsynonymous","F12S T201N",2
"lib2","SARS-CoV-2","TACAAATATAAGAACA",1,5.95,10.63,-0.2,0.1,3,1,0,"1 nonsynonymous","F44R",1
"lib2","SARS-CoV-2","TACAAATATATAATGT",4,0.4,NA,NA,NA,NA,NA,NA,"stop","Y35V W106* F156A",3
"lib2","SARS-CoV-2","TACAAATATATATTGC",10,56.07,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14D G51L N64R I104V Q163K",5
"lib2","SARS-CoV-2","TACAAATCAGAGGGGA",2,0.52,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","TACAAATCCACCCATT",3,30.66,9.82,-1.01,0.17,2.16,1.05,0.01,">1 nonsynonymous","N13H N24E F44V A105W T140M",5
"lib2","SARS-CoV-2","TACAAATCCCAATGCC",2,6.83,10.78,-0.05,0.1,2.89,1.15,0,"1 nonsynonymous","L60M",1
"lib2","SARS-CoV-2","TACAAATCTTGAAATT",7,63.26,8.69,-2.15,0.14,1.66,1.04,0.01,">1 nonsynonymous","N4L S43Y T55H G83R N107A S139G",6
"lib2","SARS-CoV-2","TACAAATGAAAATAAG",8,46.33,10.91,0.08,0.06,2.95,1.08,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","TACAAATGAAGCGTGA",3,28.11,6,-4.84,2,1.5,1.06,0.03,">1 nonsynonymous","F12N N107H",2
"lib2","SARS-CoV-2","TACAAATGACTATATG",1,35.1,10.45,-0.39,0.07,2.99,1.05,0,">1 nonsynonymous","P7C T55D P149R",3
"lib2","SARS-CoV-2","TACAAATGATACCAAA",3,22.45,8.89,-1.94,0.14,2.81,1.15,0.01,">1 nonsynonymous","G9Q G166M",2
"lib2","SARS-CoV-2","TACAAATGGAACCTTG",1,9.8,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","C6E C102Y G116A",3
"lib2","SARS-CoV-2","TACAAATGTGGGTGTA",2,46.27,8.26,-2.58,0.25,1.66,1.08,0.02,">1 nonsynonymous","C6S Y35S N118S",3
"lib2","SARS-CoV-2","TACAAATTAAACTAAC",21,154.59,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","L5I V77S Y121I E141Y Y175S",5
"lib2","SARS-CoV-2","TACAAATTCTACCGCA",6,20.79,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","P7M F99N I104Y",3
"lib2","SARS-CoV-2","TACAAATTGGAGTCCT",1,29.23,10.88,0.05,0.06,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TACAAATTTTGCTGCT",5,50.36,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N1L F12D D97K G155Y",4
"lib2","SARS-CoV-2","TACAACAAATAGATGC",3,38.64,10.25,-0.58,0.09,2.77,1.07,0,">1 nonsynonymous","P54H L60I Q144R",3
"lib2","SARS-CoV-2","TACAACAACAGAACCA",7,1.05,NA,NA,NA,NA,NA,NA,"stop","L38N I104*",2
"lib2","SARS-CoV-2","TACAACAAGAGCGCTG",2,38.6,10.52,-0.32,0.04,2.92,1.08,0,">1 nonsynonymous","P96S E141D",2
"lib2","SARS-CoV-2","TACAACACAACAACAA",7,163.63,10.52,-0.32,0.03,2.93,1.06,0,">1 nonsynonymous","N4T N110T Y123V",3
"lib2","SARS-CoV-2","TACAACACCCTAACCC",10,96.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106Q S129F G152C",3
"lib2","SARS-CoV-2","TACAACACTCACCTAA",10,163.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D68G Q84Y F126S Y175S",4
"lib2","SARS-CoV-2","TACAACAGGAAAGCAG",1,22.08,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D34Q D112W",2
"lib2","SARS-CoV-2","TACAACAGGGTACATG",2,10.69,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C61S R124Q T201P",3
"lib2","SARS-CoV-2","TACAACATAAAGAATC",3,16.86,10.52,-0.32,0.07,2.88,1.07,0,">1 nonsynonymous","L5M A81S T85R L122I",4
"lib2","SARS-CoV-2","TACAACATCAACCAAC",4,99.52,8.7,-2.14,0.07,2.76,1.04,0,">1 nonsynonymous","G51K Y119T P169I",3
"lib2","SARS-CoV-2","TACAACATCTACAAGG",1,27.95,10.73,-0.1,0.13,2.76,1.08,0.01,">1 nonsynonymous","S41N S53N",2
"lib2","SARS-CoV-2","TACAACATTTAAAAGG",12,23.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G83R C102G W106S K128R T201M",5
"lib2","SARS-CoV-2","TACAACATTTGATTAG",1,39.87,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","C61G Y119E Y165A",3
"lib2","SARS-CoV-2","TACAACCAACTAACGG",2,11.41,10.46,-0.38,0.18,2.7,1,0.01,">1 nonsynonymous","S45Y T201A",2
"lib2","SARS-CoV-2","TACAACCAATCGAGGC",2,83,10.51,-0.32,0.07,2.87,1.15,0,">1 nonsynonymous","P7A F134M",2
"lib2","SARS-CoV-2","TACAACCACGAGTATA",12,207.89,10.74,-0.1,0.03,2.92,1.09,0,">1 nonsynonymous","N64S V115A",2
"lib2","SARS-CoV-2","TACAACCCATGAATTA",4,61.16,10.74,-0.09,0.04,2.95,1.08,0,">1 nonsynonymous","V32K S53T",2
"lib2","SARS-CoV-2","TACAACCCTAAGATTG",5,26.88,10.45,-0.38,0.05,3,1.03,0,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","TACAACCGAAAACCCT",2,53.04,9.49,-1.35,0.14,2.74,1.23,0.01,"1 nonsynonymous","Y119N",1
"lib2","SARS-CoV-2","TACAACCGGGTGGGGT",9,264.37,10.79,-0.05,0.03,2.92,1.07,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TACAACCGTAGGACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S53L S129* P149S",3
"lib2","SARS-CoV-2","TACAACCTATCAGATC",2,12.84,6.27,-4.57,0.61,3,1.07,0.02,">1 nonsynonymous","F12M A105C S113A G155Y",4
"lib2","SARS-CoV-2","TACAACCTTCTACTTC",3,38.84,11.01,0.18,0.08,2.97,1.04,0,"1 nonsynonymous","I2E",1
"lib2","SARS-CoV-2","TACAACGACGTATCCA",14,88.22,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L5R V77P N130V C158Y",4
"lib2","SARS-CoV-2","TACAACGCTAAGATTA",15,101.22,8.6,-2.24,0.05,2.81,1.05,0,">1 nonsynonymous","A33N G117T",2
"lib2","SARS-CoV-2","TACAACGGCGTTGCCA",2,9.28,10.91,0.08,0.1,2.77,1.23,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","TACAACGGTCTACTAA",1,22.02,10.03,-0.81,0.08,2.97,1,0,">1 nonsynonymous","I2S C31T T55R",3
"lib2","SARS-CoV-2","TACAACGTACCGATGG",2,20.53,10.82,-0.01,0.06,2.92,1.08,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TACAACGTTACTCCAC",2,45.3,9.34,-1.49,0.08,2.78,1.15,0,">1 nonsynonymous","I104V Y119N",2
"lib2","SARS-CoV-2","TACAACTAAAAAACGC",13,86.91,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4R Y93S W106C N130Y Q163V",5
"lib2","SARS-CoV-2","TACAACTAACACTTTG",5,81.19,6.79,-4.05,0.21,1.5,1.1,0.01,">1 nonsynonymous","T140S Y143N P149I",3
"lib2","SARS-CoV-2","TACAACTAACATCGAA",4,14.41,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y66H L95P F134V",3
"lib2","SARS-CoV-2","TACAACTAATTACTAT",3,45.35,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F12R V37L N64R N107F L122P N171I",6
"lib2","SARS-CoV-2","TACAACTAATTGTGAT",9,187.02,10.77,-0.07,0.04,2.9,1.1,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","TACAACTAGTTTTGCA",6,50.96,10.91,0.07,0.05,2.86,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAACTATATCCGAA",10,115.91,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C61P V115H P149E F156W G166S R179S",6
"lib2","SARS-CoV-2","TACAACTCTTAATAGG",7,19.84,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","S41R C49S Y178S C195F",4
"lib2","SARS-CoV-2","TACAACTGCCACTTTC",12,278.95,10.51,-0.32,0.03,2.9,1.07,0,">1 nonsynonymous","A33T T148D",2
"lib2","SARS-CoV-2","TACAACTTAAGCTTCA",4,56.57,10.22,-0.62,0.06,2.68,1.07,0,"1 nonsynonymous","P133F",1
"lib2","SARS-CoV-2","TACAACTTCATTATAG",6,73.97,9.12,-1.72,0.13,1.82,1.13,0.01,">1 nonsynonymous","N58K N92S G116S A192N",4
"lib2","SARS-CoV-2","TACAACTTGATACAAT",4,40.31,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","L38D L57K A105G P149I",4
"lib2","SARS-CoV-2","TACAAGAAACTCCATT",3,58.75,10.55,-0.28,0.04,2.94,1.07,0,"1 nonsynonymous","V153W",1
"lib2","SARS-CoV-2","TACAAGAAACTTGCGA",3,0,NA,NA,NA,NA,NA,NA,"stop","R16N K48* L131E",3
"lib2","SARS-CoV-2","TACAAGAACCTCCTCC",4,22.53,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","K56F F70P G74D N130S",4
"lib2","SARS-CoV-2","TACAAGAACCTTCCTT",4,24.91,9.73,-1.1,0.27,1.5,1.04,0.03,"1 nonsynonymous","V103A",1
"lib2","SARS-CoV-2","TACAAGAAGTCAAAAG",2,15.02,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","F99N I104K",2
"lib2","SARS-CoV-2","TACAAGAATAAATACC",5,1.25,NA,NA,NA,NA,NA,NA,"stop","Y35* Y178V",2
"lib2","SARS-CoV-2","TACAAGAATCGTGATC",2,16.06,10.54,-0.29,0.07,2.96,1.06,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","TACAAGACCAATAGTC",5,2.18,NA,NA,NA,NA,NA,NA,"stop","N92T A105L Y159*",3
"lib2","SARS-CoV-2","TACAAGACGTATACCG",2,19.36,6,-4.84,2,3,1.06,0,">1 nonsynonymous","I2Y Q144Y P149F E154W V180W",5
"lib2","SARS-CoV-2","TACAAGAGACCAATGG",1,5.66,10.74,-0.1,0.19,2.68,1.37,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TACAAGAGAGATTCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E135L G155S",2
"lib2","SARS-CoV-2","TACAAGATAGTTGTGA",3,37.79,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F8L Y35T D68P",3
"lib2","SARS-CoV-2","TACAAGATATAAAGAC",4,40.03,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V52I D68K C150A K198R",4
"lib2","SARS-CoV-2","TACAAGATATTTAATT",8,96.35,10.61,-0.23,0.05,2.83,1.08,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TACAAGCAACGCCTAA",16,156.12,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","N64T Q84W N107W K128I P149W",5
"lib2","SARS-CoV-2","TACAAGCAAGAGACCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N110P Y119T Y178L",3
"lib2","SARS-CoV-2","TACAAGCACCAAACTG",7,55.57,10.71,-0.12,0.07,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAAGCACCCTAGGG",1,22.75,8.04,-2.79,0.26,1.5,1.03,0.04,"1 nonsynonymous","R25W",1
"lib2","SARS-CoV-2","TACAAGCCACCTATGT",6,166.47,9.9,-0.94,0.07,2.2,1.05,0,">1 nonsynonymous","F47S N110T",2
"lib2","SARS-CoV-2","TACAAGCCTAACTAAT",1,25.96,8.36,-2.48,0.16,2.13,1.03,0.01,">1 nonsynonymous","F62I S113W",2
"lib2","SARS-CoV-2","TACAAGCCTATTAGTA",7,62.68,10.65,-0.18,0.03,2.97,1.03,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","TACAAGCCTCCCGCAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N58* W106N F156L G172S",4
"lib2","SARS-CoV-2","TACAAGCGAGACATCG",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L T100C E186F",3
"lib2","SARS-CoV-2","TACAAGGAACCGCATA",2,20.48,7.47,-3.36,0.2,1.63,1.06,0.01,">1 nonsynonymous","V77I N120Q Q168S Y175L",4
"lib2","SARS-CoV-2","TACAAGGCCTTCCTGC",3,1.3,NA,NA,NA,NA,NA,NA,"stop","R127I Q176*",2
"lib2","SARS-CoV-2","TACAAGGCGACACACG",4,41.1,9.34,-1.5,0.05,2.96,1.09,0,">1 nonsynonymous","G9S R27M F62W Y119V K198P",5
"lib2","SARS-CoV-2","TACAAGGCTGTTACCT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","K87P I142N G174*",3
"lib2","SARS-CoV-2","TACAAGGGAGTAGTAT",7,46.58,9.97,-0.86,0.12,2.04,1.1,0,">1 nonsynonymous","K94M N110Y",2
"lib2","SARS-CoV-2","TACAAGGTAACCAGAT",2,1.42,NA,NA,NA,NA,NA,NA,"stop","F47C T63E N92* D137M",4
"lib2","SARS-CoV-2","TACAAGGTACAGCTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F T15R V32E",3
"lib2","SARS-CoV-2","TACAAGTAACAAATCT",4,19.44,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D59L D98A P161K",3
"lib2","SARS-CoV-2","TACAAGTAAGAAATAC",4,9.48,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A33T F44D L57G N107M R136S N157V",6
"lib2","SARS-CoV-2","TACAAGTAATTGCCTA",18,143.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D90Y C158Q",2
"lib2","SARS-CoV-2","TACAAGTACGCGGGGG",1,20.84,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I2V V103A P149C Y159S",4
"lib2","SARS-CoV-2","TACAAGTATACGCGAT",7,62.1,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T85G N92P N109F T140A",4
"lib2","SARS-CoV-2","TACAAGTCATCAGGAC",9,2.74,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","TACAAGTCATCTCCGG",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L S41K A81V K94N",4
"lib2","SARS-CoV-2","TACAAGTCATGGACTG",9,6.58,NA,NA,NA,NA,NA,NA,"stop","L5A L122*",2
"lib2","SARS-CoV-2","TACAAGTCTTTCTAGC",9,3.59,NA,NA,NA,NA,NA,NA,"stop","P7V K94*",2
"lib2","SARS-CoV-2","TACAAGTGAATTTGGC",8,123.89,8.88,-1.95,0.06,2.93,1.06,0,">1 nonsynonymous","Y143V E154H",2
"lib2","SARS-CoV-2","TACAAGTGACTTGTCG",2,75.5,8.82,-2.01,0.08,2.17,1.11,0,">1 nonsynonymous","F44Q G116C V173R",3
"lib2","SARS-CoV-2","TACAAGTGTTGATCCT",1,19.84,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","C61I N92S S139I P177T",4
"lib2","SARS-CoV-2","TACAAGTTATATACAA",20,161.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F62W L95D L122T",3
"lib2","SARS-CoV-2","TACAAGTTATTTTGAT",2,18.08,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","S113T L131Q",2
"lib2","SARS-CoV-2","TACAAGTTCTGGGCCA",5,1.75,NA,NA,NA,NA,NA,NA,"stop","I2S N109C S139* Y165L V180L L187M",6
"lib2","SARS-CoV-2","TACAATAAAGATTCAT",3,45.07,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","C6L R16P N92C Y119L G146W",5
"lib2","SARS-CoV-2","TACAATAAAGTGACGA",5,75.21,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","L60S D90G C158I",3
"lib2","SARS-CoV-2","TACAATAAAGTTCTAG",3,37.77,8.6,-2.24,0.31,1.97,1.2,0.04,">1 nonsynonymous","F62R Y119N V173P",3
"lib2","SARS-CoV-2","TACAATAAATAAACCA",5,36.47,7.14,-3.69,0.34,1.5,1.12,0.03,">1 nonsynonymous","V77P T85W P96H N151F",4
"lib2","SARS-CoV-2","TACAATAAATTATAGT",1,15.41,9.81,-1.03,0.1,2.47,1,0,">1 nonsynonymous","N4D R16P C61A T85M",4
"lib2","SARS-CoV-2","TACAATAACATTTAAA",4,3.86,NA,NA,NA,NA,NA,NA,"stop","N4* K56E G101K Y121N P161C G172A",6
"lib2","SARS-CoV-2","TACAATAATCATCCTC",7,4.22,NA,NA,NA,NA,NA,NA,"stop","N58R D68V V77*",3
"lib2","SARS-CoV-2","TACAATAATTAAGCAG",4,99.72,8.26,-2.58,0.1,2.31,1.07,0,">1 nonsynonymous","N40V G146K Q168F",3
"lib2","SARS-CoV-2","TACAATACACACACAA",3,17.99,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D90N F99D Y121T I142V",4
"lib2","SARS-CoV-2","TACAATACAGAATAAT",3,60.99,9.75,-1.09,0.04,2.91,1.1,0,">1 nonsynonymous","T55H Y119K",2
"lib2","SARS-CoV-2","TACAATACAGTAGCCC",8,198.53,10.14,-0.7,0.07,2.56,1.05,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","TACAATACATATGCAC",6,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Q F99S",2
"lib2","SARS-CoV-2","TACAATACGTAAAGTC",3,68.96,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D59T N130L C158V",3
"lib2","SARS-CoV-2","TACAATAGAACCCTTT",4,21.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F47N P54E L95A V103P E141D",5
"lib2","SARS-CoV-2","TACAATAGTGAATAAA",5,1.79,NA,NA,NA,NA,NA,NA,"stop","L60A Q176*",2
"lib2","SARS-CoV-2","TACAATATCGAGACGT",1,18.67,10.28,-0.56,0.15,2.48,1,0.01,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TACAATATGTAAGTTA",5,6.9,10.8,-0.03,0.09,3,1.03,0,"1 nonsynonymous","T85N",1
"lib2","SARS-CoV-2","TACAATATTGAAGATA",1,33.64,8.97,-1.86,0.09,2.01,1.09,0,">1 nonsynonymous","S41L G51F V115K F156H T201W",5
"lib2","SARS-CoV-2","TACAATCACCAGCACC",2,40.07,10.58,-0.25,0.05,2.91,1.07,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","TACAATCCAACTCAAA",5,0.7,NA,NA,NA,NA,NA,NA,"stop","D98* E186S",2
"lib2","SARS-CoV-2","TACAATCCATCCCAAC",2,8.92,10.23,-0.6,0.22,2.38,1.3,0.01,">1 nonsynonymous","Y123L S129M",2
"lib2","SARS-CoV-2","TACAATCCTCTCAAAC",6,59.91,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T3M G86T P96S Q144M P149V N157S",6
"lib2","SARS-CoV-2","TACAATCTCTTGCATC",2,42.54,6,-4.84,1.72,3,1.09,0,">1 nonsynonymous","Y39L F160N G172A Q176R",4
"lib2","SARS-CoV-2","TACAATCTGAACTCGC",3,70.23,8.49,-2.35,0.09,2.84,1.05,0,">1 nonsynonymous","G117V P149C",2
"lib2","SARS-CoV-2","TACAATCTTGCAGGAA",6,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N64Y K87N L122Y G166T",5
"lib2","SARS-CoV-2","TACAATGAAATTTAGG",2,2.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I A81S E141R P149F T201R",5
"lib2","SARS-CoV-2","TACAATGAACAACAAC",18,210.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y143S L162N",2
"lib2","SARS-CoV-2","TACAATGACAAGGTAG",6,181.05,9.76,-1.08,0.05,2.03,1.04,0,"1 nonsynonymous","V65E",1
"lib2","SARS-CoV-2","TACAATGACTTCCAAC",2,35.83,10.2,-0.63,0.04,2.98,1.01,0,">1 nonsynonymous","G9R C31K",2
"lib2","SARS-CoV-2","TACAATGATGAATGGT",4,30.3,10.43,-0.4,0.09,2.99,1.04,0,">1 nonsynonymous","P7L T148L",2
"lib2","SARS-CoV-2","TACAATGCAACTAATA",1,31.96,9.84,-1,0.12,2.62,1.02,0.01,">1 nonsynonymous","C61V D90Y I138S P197A",4
"lib2","SARS-CoV-2","TACAATGCCGTACCTC",3,42.87,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S36K S43T Y66P",3
"lib2","SARS-CoV-2","TACAATGCCTGAAACC",4,99.19,10.16,-0.67,0.04,2.93,1,0,">1 nonsynonymous","C31E N120E S129G",3
"lib2","SARS-CoV-2","TACAATGGAACACAGA",3,31.03,6.66,-4.18,0.41,1.5,1.06,0.02,">1 nonsynonymous","F12G W106Y G155S",3
"lib2","SARS-CoV-2","TACAATTAACATCGAA",12,1.63,NA,NA,NA,NA,NA,NA,"stop","N30* C49S L122I Y143T",4
"lib2","SARS-CoV-2","TACAATTAGCTAAAAC",4,1.5,NA,NA,NA,NA,NA,NA,"stop","R73T D98N N118R Q144N N151*",5
"lib2","SARS-CoV-2","TACAATTATAGAAATC",3,41.14,6,-4.84,1.86,1.5,1.06,0,">1 nonsynonymous","P161Y L183F",2
"lib2","SARS-CoV-2","TACAATTATGATAGCA",2,14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A22G C61N A81Y G86L",4
"lib2","SARS-CoV-2","TACAATTATGATTGTA",6,53.72,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68M G86L T148I",3
"lib2","SARS-CoV-2","TACAATTCTGACCATG",2,18.84,9.22,-1.61,0.13,1.94,1.04,0.01,">1 nonsynonymous","A18R C61G D98P",3
"lib2","SARS-CoV-2","TACAATTCTTACATAG",4,65.75,10.89,0.05,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TACAATTCTTTCGCTT",6,52.99,8.73,-2.11,0.09,2.92,1.05,0,">1 nonsynonymous","N40Y K48D Y119T",3
"lib2","SARS-CoV-2","TACAATTGACATCAAA",3,55.68,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6I K94D S129G Y178P",4
"lib2","SARS-CoV-2","TACAATTGATGGACTG",2,1.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L D75M W106P P149Y P177S L183P",6
"lib2","SARS-CoV-2","TACAATTGCACACAAG",3,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95C P149L N157S L183P",4
"lib2","SARS-CoV-2","TACAATTGCCGTATCG",11,163.53,6,-4.84,1.37,1.5,1.16,0.01,">1 nonsynonymous","D90F N157Y S200T",3
"lib2","SARS-CoV-2","TACAATTGGTGAAGAC",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L A105S F156A Q168C",4
"lib2","SARS-CoV-2","TACAATTGTACAGCCA",11,77.35,10.14,-0.69,0.04,2.85,1.01,0,">1 nonsynonymous","N107C C195F",2
"lib2","SARS-CoV-2","TACAATTGTCATACGT",13,85.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S29R D34A F44S K56Y D90I W106F F160P G172V",8
"lib2","SARS-CoV-2","TACAATTTAACATTTG",4,6.72,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N13I E76T A105S",3
"lib2","SARS-CoV-2","TACAATTTAAGATAGT",1,8.95,10.69,-0.15,0.08,2.51,1.5,0,"1 nonsynonymous","I104Y",1
"lib2","SARS-CoV-2","TACAATTTACGAAGGA",5,154.18,6.01,-4.83,0.75,1.5,1.19,0.01,">1 nonsynonymous","N64H A105Y Y175D",3
"lib2","SARS-CoV-2","TACAATTTGACTTCTT",9,125.54,10.87,0.03,0.05,2.91,1.1,0,"1 nonsynonymous","H189T",1
"lib2","SARS-CoV-2","TACACAAAAAAGTAAC",3,12.05,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","P82H",1
"lib2","SARS-CoV-2","TACACAAAAAGACCTA",5,65.64,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K26E T46L D90V Q168K R179G",5
"lib2","SARS-CoV-2","TACACAAAAAGTTCAT",4,63.87,10.81,-0.03,0.07,2.89,1.14,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","TACACAAAAATCCACT",10,82.17,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3M S45L D112T T170I",4
"lib2","SARS-CoV-2","TACACAAAAGATAGTA",4,10.15,6.52,-4.32,0.46,2.07,1.12,0.02,">1 nonsynonymous","G9N A89D N107G G174M G196R",5
"lib2","SARS-CoV-2","TACACAAAATCTCTGA",5,0.7,NA,NA,NA,NA,NA,NA,"stop","T3I T100* E186I",3
"lib2","SARS-CoV-2","TACACAAACTTAAGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y121G R136*",2
"lib2","SARS-CoV-2","TACACAAATAAAAACG",2,33.09,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","N30L L38P V71K I104M",4
"lib2","SARS-CoV-2","TACACAAATACTTTAA",1,5.77,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16T C49K",2
"lib2","SARS-CoV-2","TACACAAATATGTCAC",5,151.2,10.83,0,0.04,2.95,1.07,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","TACACAAATGATATGA",2,86.58,10.58,-0.25,0.05,2.91,1.07,0,">1 nonsynonymous","L95M N151G",2
"lib2","SARS-CoV-2","TACACAACAGTAGTTA",4,0.09,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib2","SARS-CoV-2","TACACAACCTCATAAT",6,75.21,8.82,-2.02,0.13,1.5,1.07,0.01,">1 nonsynonymous","N92A K132S",2
"lib2","SARS-CoV-2","TACACAACTCAGATAC",10,143.44,10.29,-0.55,0.04,2.82,1.06,0,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","TACACAACTCGCAGAA",9,63.36,8.28,-2.56,0.19,1.66,1.13,0.02,">1 nonsynonymous","N1T N30V F156C",3
"lib2","SARS-CoV-2","TACACAAGGCAAAGAA",3,87.07,9.4,-1.43,0.09,2.32,1.04,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","TACACAAGGTTAGTGG",2,3.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183P",1
"lib2","SARS-CoV-2","TACACAATAGTTAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","D90* F167W",2
"lib2","SARS-CoV-2","TACACAATCCTTCAGC",3,27.16,6.29,-4.54,0.92,1.5,1.08,0.06,">1 nonsynonymous","P96F I138L P169F",3
"lib2","SARS-CoV-2","TACACACAAATTAAAT",3,27.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37P Y91G S113Q P133C",4
"lib2","SARS-CoV-2","TACACACACAACGGAG",8,50.72,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","Y91P",1
"lib2","SARS-CoV-2","TACACACAGAAGGAAG",3,86.66,10.88,0.04,0.07,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACACATATTACCT",9,67.75,6.05,-4.79,0.44,1.5,1.17,0,"1 nonsynonymous","L131P",1
"lib2","SARS-CoV-2","TACACACCAATTATAA",9,59,10.83,-0.01,0.05,2.92,1.11,0,">1 nonsynonymous","L5P A190E",2
"lib2","SARS-CoV-2","TACACACCATTGCTTA",5,80.18,10.41,-0.42,0.04,2.89,1.08,0,">1 nonsynonymous","P96S S113A",2
"lib2","SARS-CoV-2","TACACACCGAATTAAG",3,28.49,10.44,-0.4,0.08,2.97,1.02,0,"1 nonsynonymous","F44K",1
"lib2","SARS-CoV-2","TACACACCGATTGCCG",11,57.92,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V37P C61V G86L N92C R136Y",5
"lib2","SARS-CoV-2","TACACACCGTTCACAA",5,0.66,NA,NA,NA,NA,NA,NA,"stop","S19* S45T Y91N S108P K114L A192T",6
"lib2","SARS-CoV-2","TACACACGCATCCCCT",6,96,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G9S L95H",2
"lib2","SARS-CoV-2","TACACACGTCTCAACA",14,39.01,8.56,-2.28,0.33,1.5,1.1,0.05,">1 nonsynonymous","N13Y S45K L60N G116Y",4
"lib2","SARS-CoV-2","TACACACGTTAAGAAC",1,10.2,9.88,-0.96,0.1,2.15,1,0.01,">1 nonsynonymous","P7C A18V S36K",3
"lib2","SARS-CoV-2","TACACACTTGACACAA",5,28.94,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I2S F17M V65R Y91G W106L S129I",6
"lib2","SARS-CoV-2","TACACACTTTCTATTA",4,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W I88Y K114L P149V",4
"lib2","SARS-CoV-2","TACACAGAGCCATAAG",7,121.68,10.03,-0.8,0.06,2.57,1.03,0,">1 nonsynonymous","A33V F47C D98E E141N",4
"lib2","SARS-CoV-2","TACACAGAGGCGATCC",5,50.61,10.77,-0.07,0.07,2.92,1.1,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TACACAGCAACAACGG",7,39.51,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T85M Y91V G101N C150G",4
"lib2","SARS-CoV-2","TACACAGCAGGAGGAT",2,16.45,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","W23Q S69I G152I",3
"lib2","SARS-CoV-2","TACACAGGAAAAAATA",1,4.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","TACACAGGTTGAGATC",10,76.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F62K C150Y",2
"lib2","SARS-CoV-2","TACACAGTATACATAA",12,155.89,10.57,-0.27,0.03,2.94,1.06,0,">1 nonsynonymous","L60K K114N",2
"lib2","SARS-CoV-2","TACACAGTCTCAATCA",5,43.7,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","R127P",1
"lib2","SARS-CoV-2","TACACATAAATAATCT",14,358.32,10.55,-0.29,0.03,2.94,1.05,0,"1 nonsynonymous","S43N",1
"lib2","SARS-CoV-2","TACACATAACACAATC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19L A33* Y123T",3
"lib2","SARS-CoV-2","TACACATAATACCCAA",2,47.47,10.63,-0.2,0.06,2.96,1.07,0,">1 nonsynonymous","G51N P149T T201K",3
"lib2","SARS-CoV-2","TACACATACTGTCTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T G116I",2
"lib2","SARS-CoV-2","TACACATAGAGGGATG",7,45.03,8.13,-2.7,0.28,1.5,1,0.03,">1 nonsynonymous","C6Y Y91K Q144S",3
"lib2","SARS-CoV-2","TACACATAGCATAATA",5,39.4,9.16,-1.68,0.1,2.73,1.08,0,">1 nonsynonymous","S45M N130V G155A G174M",4
"lib2","SARS-CoV-2","TACACATAGGCAATGG",8,0.22,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","TACACATAGTTACACA",11,92.2,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F47T T55F G86E",3
"lib2","SARS-CoV-2","TACACATATGTTAGCT",3,13.07,7.51,-3.33,0.28,1.5,1.3,0.04,">1 nonsynonymous","D68T T170E",2
"lib2","SARS-CoV-2","TACACATCCTGATTAG",4,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G V71K T85R",3
"lib2","SARS-CoV-2","TACACATGCCCGTTCA",10,64.05,10.81,-0.03,0.06,2.84,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACATTCGTTGCCT",2,31.13,8.86,-1.97,0.12,1.74,1.04,0.01,">1 nonsynonymous","C6I D90S K94R K132N",4
"lib2","SARS-CoV-2","TACACATTTCACTCCG",4,94.88,10.8,-0.04,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACCAAACATATTA",1,13.39,10.08,-0.75,0.17,2.19,1.06,0.01,">1 nonsynonymous","T3K P7M N58F",3
"lib2","SARS-CoV-2","TACACCAAACGATATT",1,17.84,10.11,-0.73,0.07,2.93,1.03,0,">1 nonsynonymous","L5R A89V",2
"lib2","SARS-CoV-2","TACACCAAATAAATAA",1,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82T Y93G L183G",3
"lib2","SARS-CoV-2","TACACCAACATCATGA",7,79.72,9.28,-1.55,0.08,1.94,1.06,0,">1 nonsynonymous","V11Y A89V",2
"lib2","SARS-CoV-2","TACACCAAGAATTTAG",9,83.48,11.03,0.19,0.06,2.93,1.07,0,">1 nonsynonymous","D59T L122K N130F",3
"lib2","SARS-CoV-2","TACACCAATAAGTAAT",1,37.79,10.87,0.03,0.06,2.98,1.03,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","TACACCAATAGGAATG",2,12.65,10.68,-0.15,0.06,2.98,1,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","TACACCACAAACTGCG",2,42.1,10.79,-0.05,0.04,2.94,1.06,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","TACACCACCAAGATTG",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95G Y119C S147A F167C K198F",5
"lib2","SARS-CoV-2","TACACCACCATTACCG",1,0,NA,NA,NA,NA,NA,NA,"stop","E141* E154V Q163G Q176L A190S",5
"lib2","SARS-CoV-2","TACACCACCCCCTTCC",5,31.08,7.8,-3.03,0.25,1.5,1.05,0.02,">1 nonsynonymous","R27E S36M P96L",3
"lib2","SARS-CoV-2","TACACCAGACGCAATG",12,191.77,7.76,-3.07,0.06,1.67,1.09,0,">1 nonsynonymous","E10L N157Y",2
"lib2","SARS-CoV-2","TACACCAGGAGACCGG",4,16.98,8.93,-1.91,0.22,1.74,1.08,0.02,">1 nonsynonymous","F12R S29K",2
"lib2","SARS-CoV-2","TACACCAGGTAAAAAA",5,46.46,6.75,-4.09,0.54,1.5,1.23,0.03,">1 nonsynonymous","F12S Y35S T85E",3
"lib2","SARS-CoV-2","TACACCATGAGCTTGA",8,104.21,10.89,0.05,0.06,2.97,1.05,0,"1 nonsynonymous","R16Y",1
"lib2","SARS-CoV-2","TACACCATGTGGGGTT",2,38.42,10.81,-0.03,0.09,2.95,1.09,0,"1 nonsynonymous","S200I",1
"lib2","SARS-CoV-2","TACACCATTATAACAT",2,12.17,9.25,-1.59,0.2,2.23,1.26,0.02,">1 nonsynonymous","D34N A42K L95M G116H",4
"lib2","SARS-CoV-2","TACACCCAAGGATAGG",8,62.15,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14D F47W D59Y P82S R136L C158I P177W",7
"lib2","SARS-CoV-2","TACACCCCAAACGAAT",1,20.11,10.77,-0.06,0.07,2.82,1.17,0,"1 nonsynonymous","T148R",1
"lib2","SARS-CoV-2","TACACCCCATCTACCT",5,26.39,8.46,-2.38,0.24,2.47,1.08,0.02,"1 nonsynonymous","S113E",1
"lib2","SARS-CoV-2","TACACCCGCTAAACAA",13,164.82,10.84,0.01,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACCCTATAAAGAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61H",1
"lib2","SARS-CoV-2","TACACCCTCACCAGAT",13,139.05,10.16,-0.68,0.04,2.98,1,0,">1 nonsynonymous","N4T G51M L122Q F156V",4
"lib2","SARS-CoV-2","TACACCCTCCACTGGT",1,59.08,10.22,-0.62,0.02,2.99,1.02,0,"1 nonsynonymous","C31A",1
"lib2","SARS-CoV-2","TACACCCTGTGAGTCT",20,263.13,10.64,-0.19,0.05,2.87,1.1,0,">1 nonsynonymous","N4D S41D D90S Q163S",4
"lib2","SARS-CoV-2","TACACCCTTCCGGTAG",3,23.63,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D34T I104L R124V",3
"lib2","SARS-CoV-2","TACACCCTTCCTGCCG",3,46.66,8.25,-2.58,0.13,1.93,1.06,0.01,">1 nonsynonymous","K56H G146P N151S",3
"lib2","SARS-CoV-2","TACACCCTTCTAGACT",5,38.48,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F44D D90F V103W E141L",4
"lib2","SARS-CoV-2","TACACCCTTGAAATAG",4,17.32,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T3A T15A G86I R124T Q144V",5
"lib2","SARS-CoV-2","TACACCGACACAAAAC",7,59.34,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12K I28G G101E",3
"lib2","SARS-CoV-2","TACACCGACCACCCCG",2,15.67,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","Y93G P149L Y165P Y178I",4
"lib2","SARS-CoV-2","TACACCGATATTTTCG",17,338.26,8.92,-1.91,0.1,1.5,1.05,0,">1 nonsynonymous","L38R Y91L",2
"lib2","SARS-CoV-2","TACACCGGACACGCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* T201M",2
"lib2","SARS-CoV-2","TACACCGGGATTGGAC",6,36.38,10.45,-0.39,0.05,2.89,1.05,0,"1 nonsynonymous","F62R",1
"lib2","SARS-CoV-2","TACACCGGTGTTCAGA",2,100.98,10.13,-0.71,0.05,2.97,1.02,0,"1 nonsynonymous","I142W",1
"lib2","SARS-CoV-2","TACACCGTTTAACAAT",6,17.58,6,-4.84,1.54,3,1.26,0.01,">1 nonsynonymous","C6S A42I Y50N P149Y S164R",5
"lib2","SARS-CoV-2","TACACCTAATCAAAGC",9,82.64,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G51A S113L Y123A S139L",4
"lib2","SARS-CoV-2","TACACCTATTGATAAA",4,15.34,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N40T K94P I142G A192V",4
"lib2","SARS-CoV-2","TACACCTGATATTAAC",7,1.11,NA,NA,NA,NA,NA,NA,"stop","K56* D90S T201V",3
"lib2","SARS-CoV-2","TACACCTGCAATTTTC",11,95.49,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D68Q G83R A105G T140K P177M",5
"lib2","SARS-CoV-2","TACACCTGTTCCAGGC",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A F12I Y35K T63I T85Y P96R P169H",7
"lib2","SARS-CoV-2","TACACCTTAAGGCCCT",5,23.19,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","N4Y W106P",2
"lib2","SARS-CoV-2","TACACGAACCTCTATA",2,46.01,10.52,-0.32,0.06,2.93,1.06,0,">1 nonsynonymous","L5M F44L",2
"lib2","SARS-CoV-2","TACACGAAGCAGATAA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","L5K N13* N64Y",3
"lib2","SARS-CoV-2","TACACGAAGCTAAATA",7,1.1,NA,NA,NA,NA,NA,NA,"stop","V11Y R78T V103* N120D Y165R Y175S",6
"lib2","SARS-CoV-2","TACACGAATTAAAAAA",6,12.43,10,-0.83,0.13,2.65,1.24,0.01,">1 nonsynonymous","K56F N110R Y121L",3
"lib2","SARS-CoV-2","TACACGAGAATTTAAG",9,126.18,9.56,-1.28,0.07,2.07,1.04,0,">1 nonsynonymous","Y143H V182C",2
"lib2","SARS-CoV-2","TACACGAGTGAATTCT",1,7.83,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T55H G83I Y91W Y119M F134L",5
"lib2","SARS-CoV-2","TACACGATATAAATGG",4,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33T K94F",2
"lib2","SARS-CoV-2","TACACGATATATTGTA",3,30.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10F I88P F99Y N107M",4
"lib2","SARS-CoV-2","TACACGATCCATTATA",4,5.89,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F8E I80K Q84Y D97G R127P R136V Q144K F156V",8
"lib2","SARS-CoV-2","TACACGATGCAATACA",2,46.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Q84V K114A L122H P133T Y143T F167E",6
"lib2","SARS-CoV-2","TACACGCAAAGACCTA",6,49.19,9.68,-1.16,0.05,2.22,1,0,">1 nonsynonymous","C6K D98S",2
"lib2","SARS-CoV-2","TACACGCACGAAACCG",5,31.36,9.61,-1.23,0.11,1.93,1.02,0.01,">1 nonsynonymous","N1V F44E N120F T148M",4
"lib2","SARS-CoV-2","TACACGCATAGGATTT",12,102.14,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V71M P161D S200L",3
"lib2","SARS-CoV-2","TACACGCCCTAAATGG",4,64.46,10.52,-0.31,0.06,2.87,1.13,0,"1 nonsynonymous","N40F",1
"lib2","SARS-CoV-2","TACACGCCTATCCGTT",10,227.03,10.48,-0.35,0.03,2.95,1.05,0,">1 nonsynonymous","R16I G174R",2
"lib2","SARS-CoV-2","TACACGCGACGAAGCA",2,2.41,NA,NA,NA,NA,NA,NA,"stop","V37* T100I V103L K128T F156L",5
"lib2","SARS-CoV-2","TACACGCGGGGTGCCG",5,20.75,10.36,-0.48,0.11,2.75,1.1,0.01,">1 nonsynonymous","S43L K114L S147Y G152D",4
"lib2","SARS-CoV-2","TACACGGCAAACCTAA",12,160.15,6,-4.84,2,1.5,1.28,0.02,"1 nonsynonymous","F70I",1
"lib2","SARS-CoV-2","TACACGGCACTCCGAT",6,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V V103L Y159P",3
"lib2","SARS-CoV-2","TACACGGCAGAAAACA",3,25.19,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C61L G83V Y143A C158R",4
"lib2","SARS-CoV-2","TACACGGCGTACATAG",4,111.79,8.74,-2.09,0.07,3,1.07,0,">1 nonsynonymous","Y39A N40K N157E",3
"lib2","SARS-CoV-2","TACACGGGGGGTCTCA",12,1.58,NA,NA,NA,NA,NA,NA,"stop","R73Y Y93* L122W I138L G155S",5
"lib2","SARS-CoV-2","TACACGGTGATCCTAT",3,41.29,10.51,-0.33,0.05,2.89,1.08,0,">1 nonsynonymous","C61Y R78H",2
"lib2","SARS-CoV-2","TACACGTACAAATCAA",6,68.68,9.81,-1.02,0.11,2.48,1.04,0,">1 nonsynonymous","N64K R78A V115L R136L L188V",5
"lib2","SARS-CoV-2","TACACGTGAAAATGGC",6,62.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51V Y119L E186R",3
"lib2","SARS-CoV-2","TACACGTGGGTAATGA",9,14.42,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","F44I P54L C61D A89T P96M V103P G117V",7
"lib2","SARS-CoV-2","TACACGTTGGAAGCCG",2,6.36,10.64,-0.19,0.08,2.97,1.06,0,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","TACACTAAACCTGAAA",9,69.15,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T15I R73G K94T",3
"lib2","SARS-CoV-2","TACACTAACCAATCGA",10,49.27,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","P54N Y66W V77M A81F T100M",5
"lib2","SARS-CoV-2","TACACTAACGTAATTG",3,17.83,11,0.17,0.08,2.9,1.1,0,"1 nonsynonymous","I2H",1
"lib2","SARS-CoV-2","TACACTAATAAAAGCG",1,30,10.53,-0.3,0.07,2.94,1.05,0,">1 nonsynonymous","K87I T100L",2
"lib2","SARS-CoV-2","TACACTACAAAAACAG",11,321.96,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L5R S29D R73S K128H Y143R",5
"lib2","SARS-CoV-2","TACACTACACATACTA",3,1.58,NA,NA,NA,NA,NA,NA,"stop","Y21L A42M G83S T148I N171I Y175*",6
"lib2","SARS-CoV-2","TACACTAGACAACGAG",3,0.03,NA,NA,NA,NA,NA,NA,"stop","N58R P149*",2
"lib2","SARS-CoV-2","TACACTAGAGCCTATG",12,159.31,10.84,0.01,0.06,2.97,1.06,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","TACACTAGCAAGCCCA",1,35.32,9.74,-1.1,0.11,2.16,1.04,0,">1 nonsynonymous","D34V K128G N151S",3
"lib2","SARS-CoV-2","TACACTAGCTAGGCTC",2,40.97,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S45L N64A K87A L95S N107Q Y175T",6
"lib2","SARS-CoV-2","TACACTAGGCCTCTAA",1,39.08,9.9,-0.94,0.05,2.95,1.09,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","TACACTAGTATAAATA",4,32.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N24F V52I D68R N151C S164A K198M",6
"lib2","SARS-CoV-2","TACACTATATCCAAAC",3,69.22,10.59,-0.24,0.04,2.96,1.01,0,"1 nonsynonymous","F44G",1
"lib2","SARS-CoV-2","TACACTATCTCAGGGT",13,0.8,NA,NA,NA,NA,NA,NA,"stop","S36M F99*",2
"lib2","SARS-CoV-2","TACACTATGACAACCT",3,31.95,10.8,-0.04,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACTCAAATAGCAA",8,92.26,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S29H S41A K94L R179P",4
"lib2","SARS-CoV-2","TACACTCATATACAAC",4,45.67,9.24,-1.6,0.06,2.92,1.08,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","TACACTCCCAAACGAA",6,76.93,10.66,-0.17,0.07,2.8,1.07,0,">1 nonsynonymous","T63N G116R",2
"lib2","SARS-CoV-2","TACACTCTAACGCACA",4,73.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37G Y66R C158V P197V",4
"lib2","SARS-CoV-2","TACACTCTACAATTTA",1,0.37,NA,NA,NA,NA,NA,NA,"stop","C61P V77* T100C N107M L122V",5
"lib2","SARS-CoV-2","TACACTCTTACTCAAT",1,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P L60Q D90S V103R F160D",5
"lib2","SARS-CoV-2","TACACTCTTCTCGTAA",2,119.64,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C158D G172Y",2
"lib2","SARS-CoV-2","TACACTGAAACAGTGC",6,125.47,10.32,-0.51,0.03,2.82,1.06,0,"1 nonsynonymous","N13M",1
"lib2","SARS-CoV-2","TACACTGAGCTGTTAT",1,29.11,10.17,-0.67,0.12,2.46,1.03,0.01,">1 nonsynonymous","P7L T15I",2
"lib2","SARS-CoV-2","TACACTGATACAACTA",4,29.47,7.12,-3.71,0.42,1.5,1.13,0.04,">1 nonsynonymous","D68Q D75S A81C D90A G155C",5
"lib2","SARS-CoV-2","TACACTGCCATTATCG",8,73.78,10.81,-0.03,0.03,2.92,1.08,0,">1 nonsynonymous","E141Q S147W",2
"lib2","SARS-CoV-2","TACACTGCCGTATTCT",7,1.48,NA,NA,NA,NA,NA,NA,"stop","N4S A14L V77L Y91R S113L N120* S129Y",7
"lib2","SARS-CoV-2","TACACTGCGTAGGGTC",7,88.01,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T63M Y143S T148W S164Q V181S",5
"lib2","SARS-CoV-2","TACACTGCTTTGACTT",4,21.2,6.12,-4.72,1.06,1.5,1.11,0.02,">1 nonsynonymous","C6G A22E R73Y S113P",4
"lib2","SARS-CoV-2","TACACTGGATTGGTCT",2,18.83,6,-4.84,1.49,1.5,1.17,0.03,">1 nonsynonymous","N13Q S113L P161I G174V",4
"lib2","SARS-CoV-2","TACACTGGCGACAATC",7,34.13,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L5H N30M W106R N120Y V173C P197K",6
"lib2","SARS-CoV-2","TACACTGGGATTATTA",4,38.09,10.85,0.01,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACTGGGGTGCCTG",11,63.29,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S19R A89P E141V Q168L",4
"lib2","SARS-CoV-2","TACACTGTAACCTGCA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","TACACTGTAAGAAACA",8,46.14,10.83,-0.01,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACACTGTATATCATT",2,2.14,NA,NA,NA,NA,NA,NA,"stop","P7N C102S S113*",3
"lib2","SARS-CoV-2","TACACTTAAGGACCCC",11,106.06,10.25,-0.59,0.06,2.77,1.08,0,">1 nonsynonymous","R136T T201K",2
"lib2","SARS-CoV-2","TACACTTACGACTAAC",23,82.97,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T3Y S41T F167G",3
"lib2","SARS-CoV-2","TACACTTCCCACGAAA",17,208.3,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","R73H G155D T170R",3
"lib2","SARS-CoV-2","TACACTTGACAGAGAC",6,44.13,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","F44N D68R I88L T148I",4
"lib2","SARS-CoV-2","TACACTTGGCCTCAAG",6,33.25,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","S43I T63C Y91T F99Y A105S R127G",6
"lib2","SARS-CoV-2","TACACTTTCAGGTAGA",1,18.83,8.43,-2.4,0.11,2.37,1.05,0,">1 nonsynonymous","C6R P169Y",2
"lib2","SARS-CoV-2","TACACTTTTGTCCAGC",9,87.66,9.76,-1.07,0.09,2.42,1.06,0,">1 nonsynonymous","C6S E141Y",2
"lib2","SARS-CoV-2","TACAGAAAAGACAAAG",2,32.21,10.23,-0.61,0.08,2.87,1,0,">1 nonsynonymous","T3L N58F S147M",3
"lib2","SARS-CoV-2","TACAGAAAATAACTCT",3,68.24,10.68,-0.16,0.02,2.9,1.11,0,"1 nonsynonymous","S164V",1
"lib2","SARS-CoV-2","TACAGAACAAAGATGT",2,1.16,NA,NA,NA,NA,NA,NA,"stop","N4V F12Q F44T A67I F185*",5
"lib2","SARS-CoV-2","TACAGAACAATTGCTA",5,84.92,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D68E L122N R124H",3
"lib2","SARS-CoV-2","TACAGAACTCAATAAA",7,112.12,10.79,-0.05,0.03,2.92,1.1,0,">1 nonsynonymous","R16K F160P",2
"lib2","SARS-CoV-2","TACAGAAGCTTACGAC",8,74.97,6,-4.84,2,3,1.22,0,">1 nonsynonymous","A89T E154I P161I",3
"lib2","SARS-CoV-2","TACAGAAGGGTCTCTG",8,247.11,8.24,-2.59,0.11,2.09,1.08,0,">1 nonsynonymous","V11F D59S N107D L122H",4
"lib2","SARS-CoV-2","TACAGAATGGAAACAG",3,89.37,10.43,-0.41,0.05,2.91,1.06,0,">1 nonsynonymous","I80L V153I K199R",3
"lib2","SARS-CoV-2","TACAGAATGGCCTAAC",6,2.43,NA,NA,NA,NA,NA,NA,"stop","Y50Q L60T P133L Q176* S184V",5
"lib2","SARS-CoV-2","TACAGAATTATCTATG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T63D",1
"lib2","SARS-CoV-2","TACAGACAATCTTTAT",1,7.84,8.9,-1.94,0.27,1.57,1.07,0.03,">1 nonsynonymous","T15P L122P",2
"lib2","SARS-CoV-2","TACAGACCAACAAAAA",3,1.16,NA,NA,NA,NA,NA,NA,"stop","T15K N64* S113A R124M",4
"lib2","SARS-CoV-2","TACAGACCCTACCTTA",3,10.34,NA,NA,NA,NA,NA,0.46,">1 nonsynonymous","T55F D97E R127E N157L L183D",5
"lib2","SARS-CoV-2","TACAGACGGAAAAAAT",3,68.32,10.46,-0.37,0.08,2.89,1.09,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TACAGACTTTGAACTA",2,68.63,10.91,0.08,0.06,2.9,1.12,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","TACAGAGAACACGTAA",6,0.69,NA,NA,NA,NA,NA,NA,"stop","I2F Y66S E154*",3
"lib2","SARS-CoV-2","TACAGAGAACGGTAAC",8,11.2,6.63,-4.2,0.64,1.5,1.08,0.07,">1 nonsynonymous","K87N Y93T P133T",3
"lib2","SARS-CoV-2","TACAGAGAATCAGCCC",2,17.01,8.96,-1.88,0.14,2.82,1.08,0.01,">1 nonsynonymous","G9Q T170V",2
"lib2","SARS-CoV-2","TACAGAGACATAAGTG",3,24.98,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L5R W23P V32K G86R",4
"lib2","SARS-CoV-2","TACAGAGCAGACCATA",13,0.81,NA,NA,NA,NA,NA,NA,"stop","I104* N120R",2
"lib2","SARS-CoV-2","TACAGAGCAGAGGGGT",8,108.4,10.75,-0.09,0.03,2.97,1.03,0,">1 nonsynonymous","S29N N40A",2
"lib2","SARS-CoV-2","TACAGAGCCAATTTTT",6,90.51,9.63,-1.21,0.05,2.24,1.03,0,">1 nonsynonymous","P7G C31M S41C T85S D90N Q144R",6
"lib2","SARS-CoV-2","TACAGAGCCACCCACC",2,3.47,NA,NA,NA,NA,NA,NA,"stop","S19P T63* Y175F",3
"lib2","SARS-CoV-2","TACAGAGCGGATATTG",4,25.12,9.74,-1.1,0.15,2.18,1.01,0.01,">1 nonsynonymous","F12S T100V",2
"lib2","SARS-CoV-2","TACAGAGCTTACCTTA",4,1.14,NA,NA,NA,NA,NA,NA,"stop","V77S N107* E135D",3
"lib2","SARS-CoV-2","TACAGAGGCCTTGTCC",3,31.89,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I80G T100R R127V",3
"lib2","SARS-CoV-2","TACAGAGGGAGTAGCT",2,87.8,10.72,-0.12,0.05,3,1.02,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","TACAGAGTATATTGTA",3,0.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","TACAGATAAATTTCGT",1,34.19,10.91,0.07,0.06,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TACAGATACCAAATAT",5,62.21,10.06,-0.77,0.06,2.93,1.02,0,">1 nonsynonymous","C6L K87H",2
"lib2","SARS-CoV-2","TACAGATAGGGTAAAT",2,7.18,10.84,0,0.13,2.82,1.19,0.01,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TACAGATATACTAAAA",6,86.61,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37L N40D K56W I88Q",4
"lib2","SARS-CoV-2","TACAGATGAAACACGA",5,62.78,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G9D V37F G86R F156R Y165T",5
"lib2","SARS-CoV-2","TACAGATTGACCAAAA",9,286.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S29P N109P Q176W T201E",4
"lib2","SARS-CoV-2","TACAGCAAATTAGAAG",3,63.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G74F T85S N157K",3
"lib2","SARS-CoV-2","TACAGCAACATGGTAT",6,13.11,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","D34Y C61G Q84M Y178P",4
"lib2","SARS-CoV-2","TACAGCAAGTAGCAAG",5,184.94,10.31,-0.52,0.02,2.89,1.07,0,">1 nonsynonymous","K48D L95M",2
"lib2","SARS-CoV-2","TACAGCACAAGAAACA",1,7.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T63N Y93R F99A A192V",4
"lib2","SARS-CoV-2","TACAGCACACTAATAA",6,267.72,9.82,-1.01,0.03,2.71,1.04,0,">1 nonsynonymous","I104L G155Y",2
"lib2","SARS-CoV-2","TACAGCACATCCCCGG",2,5.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77D G174P L183P",3
"lib2","SARS-CoV-2","TACAGCACCGTCAATT",4,32.61,8.84,-2,0.3,1.5,1.05,0.05,">1 nonsynonymous","N4Q I72L D90F F160C Q168C",5
"lib2","SARS-CoV-2","TACAGCAGAGACAAAA",2,34.53,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S19L Y39L F44L F134C G146V",5
"lib2","SARS-CoV-2","TACAGCAGGACCTATT",4,35.02,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N24I A89T V115W Y121K T140D",5
"lib2","SARS-CoV-2","TACAGCATGATTACTG",2,28.85,8.88,-1.96,0.05,2.87,1.13,0,">1 nonsynonymous","K128I T170L",2
"lib2","SARS-CoV-2","TACAGCATTCACACCA",2,39.17,9.95,-0.89,0.09,2.56,1.04,0,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","TACAGCCAGTGACGAG",5,9.43,6.02,-4.82,0.66,3,1.15,0.01,">1 nonsynonymous","N13C A81P A105K Y123R K128I",5
"lib2","SARS-CoV-2","TACAGCCCGAACGCCA",24,342.62,10.23,-0.61,0.05,2.7,1.04,0,"1 nonsynonymous","Y21C",1
"lib2","SARS-CoV-2","TACAGCCCGCAGAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q79R Y91T Y143V",3
"lib2","SARS-CoV-2","TACAGCCCGCCTACAA",4,19.8,9.11,-1.72,0.19,1.5,1.04,0.01,"1 nonsynonymous","R25G",1
"lib2","SARS-CoV-2","TACAGCCCTCCGTCAA",1,13.6,11.08,0.24,0.02,3,1,0,">1 nonsynonymous","N64S L122K",2
"lib2","SARS-CoV-2","TACAGCGGCCGTGTGA",6,60.88,10.62,-0.21,0.05,2.9,1.06,0,">1 nonsynonymous","D90T T201L",2
"lib2","SARS-CoV-2","TACAGCTACGGGACCT",11,227.82,9.96,-0.87,0.06,2.48,1.07,0,">1 nonsynonymous","A18L G152N T201S",3
"lib2","SARS-CoV-2","TACAGCTCCACCTGGT",7,119.62,8.54,-2.3,0.09,2.73,1.06,0,">1 nonsynonymous","G9F K48V Y119L S200N",4
"lib2","SARS-CoV-2","TACAGCTCCATTACAC",4,53.57,10.84,0,0.06,2.95,1.06,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TACAGCTGCATCACAT",1,16.96,6,-4.84,2,1.5,1.22,0.02,"1 nonsynonymous","F70K",1
"lib2","SARS-CoV-2","TACAGCTTATGACTAG",4,25.16,8.76,-2.07,0.14,1.5,1.01,0.01,">1 nonsynonymous","A14Q I28M Y50F G86N T100Q",5
"lib2","SARS-CoV-2","TACAGCTTCAACAGGA",4,8.29,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F17G I88V I142S G155F",4
"lib2","SARS-CoV-2","TACAGGAAAAAAGGAG",5,77.05,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T85A D98K C150S",3
"lib2","SARS-CoV-2","TACAGGAAATAGACAG",5,31.9,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L125G E141V C150K",3
"lib2","SARS-CoV-2","TACAGGAACTTGCAGT",1,61.86,10.16,-0.68,0.04,2.94,1.06,0,"1 nonsynonymous","Q168G",1
"lib2","SARS-CoV-2","TACAGGAAGGGTCGAG",5,79.78,9.24,-1.59,0.04,2.95,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TACAGGAATAAGTTAG",2,10.26,10.87,0.03,0.08,2.91,1.12,0,">1 nonsynonymous","S36R P149A",2
"lib2","SARS-CoV-2","TACAGGACAATAAAAG",8,171.58,10.9,0.06,0.04,2.87,1.14,0,"1 nonsynonymous","S164P",1
"lib2","SARS-CoV-2","TACAGGACCCTAAACT",3,41.04,8.45,-2.38,0.22,1.51,1.15,0.02,">1 nonsynonymous","F12H G116S",2
"lib2","SARS-CoV-2","TACAGGACGCCACGCA",10,142.41,6.37,-4.47,0.44,1.5,1.19,0.01,">1 nonsynonymous","A14M S113L",2
"lib2","SARS-CoV-2","TACAGGACTATTGCGT",6,69.81,10.88,0.04,0.06,2.95,1.06,0,"1 nonsynonymous","N1V",1
"lib2","SARS-CoV-2","TACAGGACTTATCCAC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","T3R Y39V A67V L95*",4
"lib2","SARS-CoV-2","TACAGGAGTACGGATG",6,1.37,NA,NA,NA,NA,NA,NA,"stop","G9M I80* D98E V173T",4
"lib2","SARS-CoV-2","TACAGGATCAGCGTTT",9,128.63,10.88,0.04,0.05,2.9,1.07,0,"1 nonsynonymous","N24K",1
"lib2","SARS-CoV-2","TACAGGATGGGTCAAA",3,0.14,NA,NA,NA,NA,NA,NA,"stop","V37K Q84K G101D D112* G152K",5
"lib2","SARS-CoV-2","TACAGGATTACGTAAA",3,6.18,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","T15D P82N N118I E141T",4
"lib2","SARS-CoV-2","TACAGGATTTCCTGAA",7,247.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G83F D90Y N120S S129G Y143I Y178S",6
"lib2","SARS-CoV-2","TACAGGCACGCGGACC",6,58.13,7.31,-3.52,0.12,1.5,1.06,0,">1 nonsynonymous","A14S C158K",2
"lib2","SARS-CoV-2","TACAGGCAGCGGGACA",3,79.72,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E141G R179W",2
"lib2","SARS-CoV-2","TACAGGCAGGTACCTA",4,0.09,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TACAGGCATAAAAGGA",8,101.02,10.72,-0.12,0.04,2.93,1.07,0,"1 nonsynonymous","G51Q",1
"lib2","SARS-CoV-2","TACAGGCATAACGCCA",7,138.62,8.03,-2.8,0.16,1.63,1.13,0.01,">1 nonsynonymous","A18E A22E Y165M",3
"lib2","SARS-CoV-2","TACAGGCCGAAACTAG",5,0.89,NA,NA,NA,NA,NA,NA,"stop","K26* Y35C G174V T201M",4
"lib2","SARS-CoV-2","TACAGGCCGATTACTA",10,52.73,6,-4.84,2,3,1.05,0,">1 nonsynonymous","A105H G152I L162M T201R",4
"lib2","SARS-CoV-2","TACAGGGATACAACTG",2,63.61,10.88,0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAGGTAAAAAAATC",7,53.21,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6Q A14I K87M N107S Y119M",5
"lib2","SARS-CoV-2","TACAGGTAAAAAGCTA",2,0.24,NA,NA,NA,NA,NA,NA,"stop","T46S A89T V181* A190F",4
"lib2","SARS-CoV-2","TACAGGTAAAGTCAAC",1,7.92,9.04,-1.8,0.16,1.93,1.1,0.01,">1 nonsynonymous","F44Q G116C V173R",3
"lib2","SARS-CoV-2","TACAGGTACAACGTGT",17,421.91,10.71,-0.13,0.02,2.94,1.05,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","TACAGGTAGTCTCACA",2,49.25,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F8V T100Y N157L",3
"lib2","SARS-CoV-2","TACAGGTATGAGGCAT",3,1.44,NA,NA,NA,NA,NA,NA,"stop","A105T N130* S147W",3
"lib2","SARS-CoV-2","TACAGGTCCACTGACA",4,16.94,8.84,-1.99,0.23,2.36,1.13,0.02,"1 nonsynonymous","S113D",1
"lib2","SARS-CoV-2","TACAGGTGCTATATGA",11,78.28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V52N A89V N157V S200L",4
"lib2","SARS-CoV-2","TACAGGTGCTCAATTG",4,19.62,6.31,-4.53,0.61,1.5,1.12,0.02,">1 nonsynonymous","N58L S69W E135S",3
"lib2","SARS-CoV-2","TACAGGTGTCTGTTCC",2,9.51,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","Y119T R124D Y175E",3
"lib2","SARS-CoV-2","TACAGGTTACTTTAAA",11,206.75,9.85,-0.98,0.05,2.94,1.05,0,">1 nonsynonymous","K114G G196D",2
"lib2","SARS-CoV-2","TACAGGTTCAATTATG",2,0,NA,NA,NA,NA,NA,NA,"stop","R27* V153Y",2
"lib2","SARS-CoV-2","TACAGTAAAACTCTAC",10,2.46,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","TACAGTAAAGAATAGT",2,27.54,7.77,-3.07,0.27,1.72,1.21,0.02,">1 nonsynonymous","N1L N30I V180D",3
"lib2","SARS-CoV-2","TACAGTAACAAAGCTT",1,18.14,10.83,0,0.06,2.88,1.15,0,"1 nonsynonymous","Y39T",1
"lib2","SARS-CoV-2","TACAGTAACTACTAGT",5,19.43,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T85R Y91W G101N K114V T201I",5
"lib2","SARS-CoV-2","TACAGTAAGAATAGAG",7,33.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7I S41T R73S A105W R136W V173R",6
"lib2","SARS-CoV-2","TACAGTAAGTAAGAAT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","T201*",1
"lib2","SARS-CoV-2","TACAGTACACATCAAT",10,211.27,10.83,-0.01,0.04,2.93,1.09,0,"1 nonsynonymous","T100V",1
"lib2","SARS-CoV-2","TACAGTACACCAGATC",1,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63L G86C S113Q",3
"lib2","SARS-CoV-2","TACAGTACCAATGACT",12,75.98,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6S W23V",2
"lib2","SARS-CoV-2","TACAGTACTATATAAG",3,24.6,9.35,-1.48,0.16,1.91,1.03,0.01,">1 nonsynonymous","D90I T140F",2
"lib2","SARS-CoV-2","TACAGTAGGAACCGAT",13,183.6,10.84,0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAGTATACCTCATT",7,23.38,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","D98E S113V G146C T170P",4
"lib2","SARS-CoV-2","TACAGTATAGAGGTCC",5,35.42,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","Y21M Y93S Q168K",3
"lib2","SARS-CoV-2","TACAGTCACAACTAGA",14,107.32,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G86N N157I K198A",3
"lib2","SARS-CoV-2","TACAGTCACTTGACCT",5,51.89,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F99P N107W",2
"lib2","SARS-CoV-2","TACAGTCCTATGACAC",4,16.78,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","A14Y Y21H G101A V153K",4
"lib2","SARS-CoV-2","TACAGTCGCAAATATA",4,31.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3P L57Y N107H",3
"lib2","SARS-CoV-2","TACAGTCGTTTTTAAA",2,23.95,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","L5W K94E R127S",3
"lib2","SARS-CoV-2","TACAGTGAGCCGTAAT",3,72.25,10.58,-0.26,0.04,2.93,1.05,0,">1 nonsynonymous","L111I Y121Q T148I",3
"lib2","SARS-CoV-2","TACAGTGAGGCACTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","A14S S41F S200*",3
"lib2","SARS-CoV-2","TACAGTGCTGGCGAAA",8,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54H V173I",2
"lib2","SARS-CoV-2","TACAGTGGAAAACCCG",4,53.97,10.8,-0.04,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACAGTGGACAAGATA",13,272.72,10.54,-0.3,0.03,2.89,1.04,0,">1 nonsynonymous","A33V K114N I138L",3
"lib2","SARS-CoV-2","TACAGTGTAACCGATG",7,0.98,NA,NA,NA,NA,NA,NA,"stop","G83* S129P",2
"lib2","SARS-CoV-2","TACAGTGTACCACGCA",6,7.77,6,-4.84,2,1.5,1.17,0.05,"1 nonsynonymous","V103Q",1
"lib2","SARS-CoV-2","TACAGTTAAGAAAGTC",4,121.72,10.76,-0.07,0.03,2.93,1.06,0,">1 nonsynonymous","V11I L95V N110T",3
"lib2","SARS-CoV-2","TACAGTTAGAATTATA",1,10.19,9.06,-1.78,0.19,1.5,1,0.02,">1 nonsynonymous","Y35W L95P G196A",3
"lib2","SARS-CoV-2","TACAGTTAGCTATAAA",1,1.34,NA,NA,NA,NA,NA,NA,"stop","A42K C61P Y175*",3
"lib2","SARS-CoV-2","TACAGTTCATAAAATA",4,8.36,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","F44S G86K",2
"lib2","SARS-CoV-2","TACAGTTCATCCCCCT",13,100.78,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N13C N107Y",2
"lib2","SARS-CoV-2","TACAGTTCGTAACTGT",2,14.14,6,-4.84,2,3,1.2,0,">1 nonsynonymous","T46L S53N K94L G101Y",4
"lib2","SARS-CoV-2","TACAGTTGAAACAATA",4,7.55,NA,NA,NA,NA,NA,NA,"stop","Y35W K56I V65K L131*",4
"lib2","SARS-CoV-2","TACAGTTGCCCTAATC",3,91.97,10.71,-0.12,0.03,2.99,1.04,0,">1 nonsynonymous","N4A T46L N130S",3
"lib2","SARS-CoV-2","TACAGTTGCTTACACC",3,57.1,10.86,0.02,0.05,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATAAAAGACCTGA",1,74.73,11,0.17,0.05,2.87,1.12,0,"1 nonsynonymous","N171V",1
"lib2","SARS-CoV-2","TACATAAAATGTTAAG",4,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V G101L Q168I",3
"lib2","SARS-CoV-2","TACATAAACAGTTTAT",6,102.04,10.74,-0.1,0.04,2.88,1.09,0,"1 nonsynonymous","K56I",1
"lib2","SARS-CoV-2","TACATAAACATTATAC",8,0.34,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TACATAAAGGTTTACT",1,10.08,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","L95N W106L G117R A145V G155S",5
"lib2","SARS-CoV-2","TACATAAAGTAATCTG",6,21.96,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D59E D68Q C150R T201A",4
"lib2","SARS-CoV-2","TACATAAAGTATCACC",2,0.48,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162I",1
"lib2","SARS-CoV-2","TACATAAATATTTCAG",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38H D98V N130L",3
"lib2","SARS-CoV-2","TACATAAATCTAACAA",11,113.87,9.72,-1.11,0.04,2.75,1.05,0,">1 nonsynonymous","C31L C61P A190L",3
"lib2","SARS-CoV-2","TACATAAATCTCCCAC",4,48.07,10.78,-0.05,0.04,2.9,1.06,0,">1 nonsynonymous","V37I S200L",2
"lib2","SARS-CoV-2","TACATAAATGAAAATG",8,75.02,10.8,-0.04,0.07,2.89,1.1,0,"1 nonsynonymous","T148M",1
"lib2","SARS-CoV-2","TACATAAATGTTTGCA",5,86.08,10.8,-0.04,0.04,2.92,1.08,0,"1 nonsynonymous","K56R",1
"lib2","SARS-CoV-2","TACATAAATTCAGAGT",16,91,6.01,-4.82,0.62,1.92,1.2,0.01,">1 nonsynonymous","S19R R27Q D112Q",3
"lib2","SARS-CoV-2","TACATAACAAAAGATT",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V C49S L60H D98L",4
"lib2","SARS-CoV-2","TACATAACAACATTAA",2,21.66,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G101Q E154Q Y165L T170P",4
"lib2","SARS-CoV-2","TACATAACTGCATCAC",4,102.88,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L38P Y121S Y159T",3
"lib2","SARS-CoV-2","TACATAAGCGGTTAGG",5,84.19,10.57,-0.26,0.06,2.84,1.12,0,">1 nonsynonymous","K56M F134L",2
"lib2","SARS-CoV-2","TACATAAGGTTATTAA",2,24.67,10.04,-0.8,0.08,2.83,1.01,0,">1 nonsynonymous","L60F G155L",2
"lib2","SARS-CoV-2","TACATAAGTAAAAATA",3,3.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F T15V D90H F99H S108T",5
"lib2","SARS-CoV-2","TACATAATAACTTATT",5,49.19,9.29,-1.55,0.07,1.9,1.06,0,"1 nonsynonymous","Y50N",1
"lib2","SARS-CoV-2","TACATAATCCAGAAAA",3,14.68,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","C6I S53T Q84R I138Y C150Y",5
"lib2","SARS-CoV-2","TACATAATGAGTGAAG",13,102.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P7Y D59V G83L K128P F134S",5
"lib2","SARS-CoV-2","TACATAATTTACCGCG",5,87.89,9.59,-1.24,0.04,2.94,1.07,0,"1 nonsynonymous","T170P",1
"lib2","SARS-CoV-2","TACATACACACCATTA",1,13.7,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","V11S V37S G83V V103C",4
"lib2","SARS-CoV-2","TACATACCACACAAGC",3,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K S43R N107F F126Q Q168S G174L",6
"lib2","SARS-CoV-2","TACATACCACACCAAG",1,0.48,NA,NA,NA,NA,NA,NA,"stop","L38M C49N A81G T85* N118F V180T",6
"lib2","SARS-CoV-2","TACATACCCTACCCAG",2,28.86,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","G51D L60C N107R S113M I142S",5
"lib2","SARS-CoV-2","TACATACCTAAATAAA",1,6.45,10.46,-0.37,0.11,2.78,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATACGAGAGAGAA",12,1.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56N L60P P82C",3
"lib2","SARS-CoV-2","TACATACTAGCTAATA",2,33.32,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F44S P82V K132F G155A",4
"lib2","SARS-CoV-2","TACATACTAGTTGATG",3,57.84,10.71,-0.12,0.07,2.82,1.2,0,"1 nonsynonymous","K132M",1
"lib2","SARS-CoV-2","TACATACTTCAAGAGT",5,49.36,6.88,-3.96,0.42,1.5,1.22,0.03,">1 nonsynonymous","N107D K128M G155R",3
"lib2","SARS-CoV-2","TACATAGACCTTAAAT",3,35.41,9.86,-0.97,0.05,2.84,1.12,0,"1 nonsynonymous","N118T",1
"lib2","SARS-CoV-2","TACATAGAGTGGCTTG",2,110.78,10.86,0.03,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATAGGAATTTCCA",5,157.25,9.93,-0.91,0.04,2.88,1.07,0,">1 nonsynonymous","K48C D98N I142P",3
"lib2","SARS-CoV-2","TACATAGGTTCGTAGT",2,40.32,8.05,-2.79,0.21,1.97,1.06,0.02,">1 nonsynonymous","Q84K Y143R",2
"lib2","SARS-CoV-2","TACATAGTCTCTTAGT",8,111.82,8.82,-2.01,0.07,2.33,1.11,0,">1 nonsynonymous","D90H Y119R P191I",3
"lib2","SARS-CoV-2","TACATATACATACTGG",4,20.13,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6E A18C N118K T170S",4
"lib2","SARS-CoV-2","TACATATATGACGGGA",9,1.37,NA,NA,NA,NA,NA,NA,"stop","Y35C N58C N120* G146F",4
"lib2","SARS-CoV-2","TACATATCATGAAAAA",3,40.83,6,-4.84,2,1.5,1.1,0,"1 nonsynonymous","I72K",1
"lib2","SARS-CoV-2","TACATATCCATCTATC",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4I K56C",2
"lib2","SARS-CoV-2","TACATATCTATACCAA",5,84.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5R K128M P177V H189Q",4
"lib2","SARS-CoV-2","TACATATGGCCTCAGA",9,77.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12G A18V S29L F44P",4
"lib2","SARS-CoV-2","TACATATTAATACCTC",11,32.68,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A89G D97L I104Y Y175M S184N",5
"lib2","SARS-CoV-2","TACATATTATTGATAA",9,38.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R R127S G155C",3
"lib2","SARS-CoV-2","TACATATTCATTTACA",14,34.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42M N92G W106S",3
"lib2","SARS-CoV-2","TACATATTGTACCCAC",2,7.36,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","G9V F99L S129N F167L",4
"lib2","SARS-CoV-2","TACATCAAATCTACAC",5,18.45,8,-2.84,0.37,1.5,1,0.07,">1 nonsynonymous","A89V P96Q",2
"lib2","SARS-CoV-2","TACATCAACGATGTGC",2,12.58,10.99,0.15,0.1,2.83,1.15,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TACATCAACTAGCCTT",3,166.47,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P96D G172V K199T",3
"lib2","SARS-CoV-2","TACATCAACTTGGACA",8,128.81,8.63,-2.21,0.09,2.23,1.09,0,">1 nonsynonymous","K56P N120Q N157S S164A",4
"lib2","SARS-CoV-2","TACATCAATTTGAAAT",4,0.97,NA,NA,NA,NA,NA,NA,"stop","I104Y S139*",2
"lib2","SARS-CoV-2","TACATCACTGAAATAA",2,28.14,7.83,-3,0.24,2.11,1.11,0.05,">1 nonsynonymous","S43L S113Q Y119I",3
"lib2","SARS-CoV-2","TACATCACTTACCACG",13,296.81,10.46,-0.37,0.03,2.92,1.06,0,">1 nonsynonymous","A67V N120I V173L",3
"lib2","SARS-CoV-2","TACATCAGAGTGCCTT",8,45.74,6.14,-4.7,0.77,1.5,1.2,0.02,">1 nonsynonymous","F12N P54G W106F",3
"lib2","SARS-CoV-2","TACATCAGCTTTCAAT",4,95.28,10.74,-0.09,0.04,3,1.04,0,">1 nonsynonymous","G9R V37W",2
"lib2","SARS-CoV-2","TACATCAGGTGACTGA",6,40.8,8.98,-1.86,0.14,1.89,1.14,0.01,">1 nonsynonymous","F8R A14T T63Q K87Y N171H",5
"lib2","SARS-CoV-2","TACATCATAAACCCAA",2,34.57,10.89,0.06,0.06,2.98,1.01,0,"1 nonsynonymous","T63E",1
"lib2","SARS-CoV-2","TACATCATACATGACA",9,25.72,8.54,-2.3,0.27,1.5,1.07,0.03,">1 nonsynonymous","A14V I80L L95M",3
"lib2","SARS-CoV-2","TACATCATGATTAATA",7,72.85,10.64,-0.2,0.04,2.82,1.1,0,">1 nonsynonymous","A42S T55V F160W",3
"lib2","SARS-CoV-2","TACATCCAAAATTGAA",3,6.67,6,-4.84,2,3,1.23,0.02,">1 nonsynonymous","D59Y Y93V T201R",3
"lib2","SARS-CoV-2","TACATCCCCCTGTATC",3,56.76,8.98,-1.85,0.11,2.55,1.02,0,">1 nonsynonymous","N13M F126I",2
"lib2","SARS-CoV-2","TACATCCTCAAGCGCA",11,252.47,10.56,-0.28,0.04,2.9,1.1,0,"1 nonsynonymous","T140W",1
"lib2","SARS-CoV-2","TACATCCTCCTAGTAA",3,49.37,7.24,-3.6,0.3,1.77,1.29,0.02,">1 nonsynonymous","C6S F12S S36K",3
"lib2","SARS-CoV-2","TACATCGCGATTGGAA",3,26.26,10.29,-0.54,0.06,2.82,1.05,0,">1 nonsynonymous","I2R A22T G116N",3
"lib2","SARS-CoV-2","TACATCGTCTAGAAAC",11,64.24,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27G D68M Y143S",3
"lib2","SARS-CoV-2","TACATCTACACGGATT",10,336.62,8.13,-2.7,0.12,1.77,1.07,0.01,">1 nonsynonymous","Y91V F126C",2
"lib2","SARS-CoV-2","TACATCTACCGAACAG",3,46.33,6,-4.84,1.79,2.55,1.16,0.05,">1 nonsynonymous","P7S N120Y Q168I Q176P",4
"lib2","SARS-CoV-2","TACATCTATATGAAAT",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N I80A G86A G172L",4
"lib2","SARS-CoV-2","TACATCTCAATTATCG",4,5.26,NA,NA,NA,NA,NA,NA,"stop","W23* S41V K94D N107R",4
"lib2","SARS-CoV-2","TACATCTCTATCATAT",5,125.64,10.74,-0.09,0.04,2.98,1.02,0,">1 nonsynonymous","D97S N120S",2
"lib2","SARS-CoV-2","TACATCTGACAGCATT",6,71.9,10.29,-0.55,0.03,2.92,1.08,0,"1 nonsynonymous","G146H",1
"lib2","SARS-CoV-2","TACATGAAAAAGCCTG",6,48.59,6,-4.84,1.13,1.5,1.18,0.02,">1 nonsynonymous","N13R T46I S69M D98T L162D Y175S",6
"lib2","SARS-CoV-2","TACATGAAACCCGTCC",8,58.59,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L60V D68S G166K",3
"lib2","SARS-CoV-2","TACATGAAATCCTTAC",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T A145E Y159C V173T",4
"lib2","SARS-CoV-2","TACATGAACGCTTCTC",4,54.92,10.74,-0.1,0.06,2.86,1.12,0,"1 nonsynonymous","P149Y",1
"lib2","SARS-CoV-2","TACATGAATAAGCGAT",3,7.05,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","A14L S53K N157Y",3
"lib2","SARS-CoV-2","TACATGAATATGGAGT",7,108.3,10.76,-0.07,0.03,2.9,1.12,0,">1 nonsynonymous","R16H Y35F D90T",3
"lib2","SARS-CoV-2","TACATGAATCAGAAAT",3,17.91,9.88,-0.96,0.1,2.8,1,0,">1 nonsynonymous","Y66L Y91H",2
"lib2","SARS-CoV-2","TACATGAATCTAAACG",1,11.04,10.42,-0.42,0.27,2.29,1.1,0.03,">1 nonsynonymous","C6D I104S S164H K198V",4
"lib2","SARS-CoV-2","TACATGAATTCGTATG",1,67.26,10.76,-0.08,0.02,2.93,1.06,0,">1 nonsynonymous","S36K Q163C",2
"lib2","SARS-CoV-2","TACATGACAATATCGC",1,19.36,10.81,-0.03,0.04,2.99,1.03,0,">1 nonsynonymous","V52F K132R",2
"lib2","SARS-CoV-2","TACATGACGTTTTAGC",1,25.48,8.52,-2.32,0.1,2,1.09,0,">1 nonsynonymous","Y66T P133K T170E",3
"lib2","SARS-CoV-2","TACATGAGCGATATTC",3,80.91,10.69,-0.15,0.03,2.98,1.04,0,">1 nonsynonymous","G9M K132L A192S P197T",4
"lib2","SARS-CoV-2","TACATGAGCGCTACCG",5,160.04,9.75,-1.09,0.03,2.91,1.07,0,">1 nonsynonymous","Y119T N130K P197L",3
"lib2","SARS-CoV-2","TACATGCAACTGTAAA",10,55.53,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9E F17S Y35R N107T P149L T201R",6
"lib2","SARS-CoV-2","TACATGCAATTCGAAA",4,41.56,10.55,-0.28,0.33,1.55,1.03,0.04,">1 nonsynonymous","L5G F12R S45N A81G",4
"lib2","SARS-CoV-2","TACATGCCAAAGAAAG",1,8.76,7.48,-3.36,0.19,1.5,1,0.01,">1 nonsynonymous","A89Y Y119V",2
"lib2","SARS-CoV-2","TACATGCCATATCGGC",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4K D59A G146W",3
"lib2","SARS-CoV-2","TACATGCCTAGGCCAG",6,36.29,9.11,-1.73,0.11,1.76,1.05,0.01,">1 nonsynonymous","F12S C31L",2
"lib2","SARS-CoV-2","TACATGCCTCCTAATG",16,73.71,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","V103R V115I N157R",3
"lib2","SARS-CoV-2","TACATGCGATCCGAAT",9,21.26,7.72,-3.12,0.32,1.5,1.06,0.04,">1 nonsynonymous","I104E K132A",2
"lib2","SARS-CoV-2","TACATGCTACGAGTTT",5,50.22,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N4R W23L D90M Y121I R179Y",5
"lib2","SARS-CoV-2","TACATGCTTAGAAAAA",1,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H K87R N107H E141T",4
"lib2","SARS-CoV-2","TACATGCTTATAGGCG",3,36.55,6.83,-4.01,0.56,1.5,1.13,0.07,">1 nonsynonymous","T3I A105V T170Y H189Y",4
"lib2","SARS-CoV-2","TACATGCTTTTGATGA",9,19.97,7.11,-3.72,0.26,1.53,1.21,0.02,">1 nonsynonymous","G9H C61T D112L K132I",4
"lib2","SARS-CoV-2","TACATGGAAGCCCCCA",1,8.81,7.03,-3.81,0.65,3,1.13,0.02,">1 nonsynonymous","I88S T100E I104N S113V L122G N130Q D137E E141F",8
"lib2","SARS-CoV-2","TACATGGACGCGTTGA",6,97.42,10.19,-0.65,0.06,2.49,1,0,">1 nonsynonymous","L95C S200L",2
"lib2","SARS-CoV-2","TACATGGAGTCAATCG",8,97.19,10.67,-0.17,0.02,2.99,1,0,">1 nonsynonymous","I2L G9V A42H",3
"lib2","SARS-CoV-2","TACATGGCAATGCATA",1,8.99,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E141K P177T",2
"lib2","SARS-CoV-2","TACATGGCATTTTCAA",9,44.62,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41R A81I D112S L125W E141W Q168R Y178F",7
"lib2","SARS-CoV-2","TACATGGGAAATAATC",2,33.02,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","N30Q P82E",2
"lib2","SARS-CoV-2","TACATGGGACAGATGC",7,223.22,10.28,-0.55,0.02,2.88,1.07,0,">1 nonsynonymous","Y35I K56L T63I Q144P",4
"lib2","SARS-CoV-2","TACATGGGCCACAATT",1,51.13,10.9,0.06,0.05,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TACATGTCATTCCGAA",4,54.27,6,-4.83,0.95,1.5,1.06,0.02,">1 nonsynonymous","F8I L57V T63P K87D S129D Y143P N157D",7
"lib2","SARS-CoV-2","TACATGTCCACTGACC",5,2.46,NA,NA,NA,NA,NA,NA,"stop","Y39L Q84* Y93L D97I K128D",5
"lib2","SARS-CoV-2","TACATGTCTTATATCC",5,9.94,NA,NA,NA,NA,NA,NA,"stop","N1Y N64A L125T L162C Y175*",5
"lib2","SARS-CoV-2","TACATGTTAACCAGTA",5,23.77,10.07,-0.76,0.04,2.99,1,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","TACATGTTACATATCA",10,178.55,10.41,-0.43,0.05,2.89,1.07,0,">1 nonsynonymous","D90T T140R",2
"lib2","SARS-CoV-2","TACATTAAAAAAATAT",8,71.01,8.35,-2.49,0.16,2.13,1.09,0.01,">1 nonsynonymous","I104V G172S A190E",3
"lib2","SARS-CoV-2","TACATTAAAATGCCGA",4,56.4,10.88,0.04,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATTAAACAAATGA",6,117.6,10.62,-0.21,0.08,2.83,1.03,0,">1 nonsynonymous","G9A T85Q N120L",3
"lib2","SARS-CoV-2","TACATTAAACACAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35A Y119A F156N",3
"lib2","SARS-CoV-2","TACATTAAAGCACCAT",5,67.54,10.12,-0.72,0.07,2.56,1.06,0,">1 nonsynonymous","S29K R127S V153R",3
"lib2","SARS-CoV-2","TACATTAAAGGTAATG",1,16.94,9.59,-1.25,0.09,2.78,1.04,0,">1 nonsynonymous","K26M A89P P169S",3
"lib2","SARS-CoV-2","TACATTAATTTGCACC",6,67.33,10.89,0.05,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATTACAACTAACA",4,89.36,10.75,-0.08,0.06,2.87,1.14,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","TACATTACATATGAGG",11,146.57,9.82,-1.01,0.09,2.33,1.06,0,">1 nonsynonymous","K114L R127S",2
"lib2","SARS-CoV-2","TACATTACTTACCCGA",2,97.24,10.28,-0.56,0.03,2.82,1.02,0,"1 nonsynonymous","F185G",1
"lib2","SARS-CoV-2","TACATTAGCGATTGGT",3,54.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28R K87L K94S K128E",4
"lib2","SARS-CoV-2","TACATTAGCTAACCAT",1,9.85,10.98,0.14,0.08,2.85,1.16,0,"1 nonsynonymous","T100F",1
"lib2","SARS-CoV-2","TACATTAGGAGAAAAT",1,3.17,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N13F",1
"lib2","SARS-CoV-2","TACATTAGTAAGCAAG",10,287.47,10.56,-0.28,0.05,2.86,1.08,0,">1 nonsynonymous","T55H Q84R F134M",3
"lib2","SARS-CoV-2","TACATTAGTAATTTAC",1,10.13,9.75,-1.09,0.19,1.95,1.07,0.01,"1 nonsynonymous","D137V",1
"lib2","SARS-CoV-2","TACATTATAGGAATCT",5,73.23,10.56,-0.28,0.05,2.9,1.08,0,">1 nonsynonymous","P169I P197K",2
"lib2","SARS-CoV-2","TACATTCAAAAACCCT",6,62.06,10.9,0.06,0.03,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TACATTCAAACCTGAA",2,15.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A14C A22T F47V F99I S147R",5
"lib2","SARS-CoV-2","TACATTCAAATTCTAA",5,134.38,10.3,-0.54,0.05,2.81,1.07,0,">1 nonsynonymous","A81T Q84T I138T",3
"lib2","SARS-CoV-2","TACATTCACTTATTAG",3,61.6,10.56,-0.28,0.04,2.88,1.09,0,">1 nonsynonymous","T15P E135Q",2
"lib2","SARS-CoV-2","TACATTCCATTGAGGA",3,46.65,10.61,-0.23,0.07,2.95,1.03,0,">1 nonsynonymous","K56S S164V",2
"lib2","SARS-CoV-2","TACATTCCCTGCGAAC",9,147.68,9.98,-0.86,0.08,2.01,1.02,0,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","TACATTCCTAAAGGAG",2,16,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","Y93A T100S K198I",3
"lib2","SARS-CoV-2","TACATTCGCAACCTCC",1,7.94,9.87,-0.96,0.15,2.83,1.07,0.01,">1 nonsynonymous","C6M R78H",2
"lib2","SARS-CoV-2","TACATTCTCATAACCC",2,19.34,10.9,0.07,0.05,2.97,1.06,0,"1 nonsynonymous","S200F",1
"lib2","SARS-CoV-2","TACATTCTGTTAATAT",4,47.09,9.23,-1.6,0.1,1.97,1.03,0.01,">1 nonsynonymous","V20S F160V",2
"lib2","SARS-CoV-2","TACATTGAAACTAACT",2,15.42,10.04,-0.79,0.12,2.97,1,0,">1 nonsynonymous","E10A A33K",2
"lib2","SARS-CoV-2","TACATTGCCCACGCAA",6,36.83,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","C61H G86D N92S V103E G146K Y178I",6
"lib2","SARS-CoV-2","TACATTGCCCAGTCCG",3,14.6,10.78,-0.06,0.09,3,1,0,">1 nonsynonymous","T15S L60A",2
"lib2","SARS-CoV-2","TACATTGGAATGTTTC",12,3.72,NA,NA,NA,NA,NA,NA,"stop","G9E C49S F167T Y178*",4
"lib2","SARS-CoV-2","TACATTGGACTCAAAT",6,25.56,8.4,-2.43,0.22,1.5,1.23,0.03,">1 nonsynonymous","D59Y A89T P96D T201S",4
"lib2","SARS-CoV-2","TACATTGGGGATGACA",3,32.52,8.75,-2.09,0.09,2.88,1.1,0,">1 nonsynonymous","F126R P149A",2
"lib2","SARS-CoV-2","TACATTGGTGTATGAC",4,24.05,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P96E V115C S147I G155V",4
"lib2","SARS-CoV-2","TACATTGGTTCGACTT",1,79.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F44A K56A R78A V103M G116F Q176L",6
"lib2","SARS-CoV-2","TACATTGTATGATGGG",2,79.65,8.83,-2.01,0.15,1.77,1.13,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","TACATTGTGGTATAGT",2,8.71,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","T15N N64L A105L E135M",4
"lib2","SARS-CoV-2","TACATTTAAGAATAAG",3,60.23,10.67,-0.17,0.05,2.93,1.07,0,">1 nonsynonymous","R27M C61P",2
"lib2","SARS-CoV-2","TACATTTAAGACCGAT",1,76.51,10.15,-0.69,0.08,2.63,1.07,0,"1 nonsynonymous","P96H",1
"lib2","SARS-CoV-2","TACATTTAAGGAACAA",11,162.11,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R73L Q176L",2
"lib2","SARS-CoV-2","TACATTTAATATTGCT",1,21.93,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","R73P D98F Y143M",3
"lib2","SARS-CoV-2","TACATTTATTGCGATA",2,37.33,10.09,-0.75,0.08,2.55,1.05,0,">1 nonsynonymous","Y66R S184A",2
"lib2","SARS-CoV-2","TACATTTCGACGATTA",11,355.93,9.24,-1.59,0.07,2.71,1.05,0,">1 nonsynonymous","L5W G83N P177S",3
"lib2","SARS-CoV-2","TACATTTCGCACAATA",1,54.14,6.81,-4.03,0.33,1.5,1.09,0.02,">1 nonsynonymous","F8W R25T G83D Y119K",4
"lib2","SARS-CoV-2","TACATTTTATACCATC",5,12.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41W C49I S69H V77W T140S",5
"lib2","SARS-CoV-2","TACATTTTTAATTCTT",2,17.08,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","E10T R16L S45F K94D Y119H E141Y",6
"lib2","SARS-CoV-2","TACATTTTTGGAATTT",3,66.81,8.51,-2.33,0.16,1.5,1.05,0.02,">1 nonsynonymous","F47L G155L Y178N",3
"lib2","SARS-CoV-2","TACATTTTTTAATAAT",7,36.61,8.82,-2.02,0.11,1.99,1.07,0.01,">1 nonsynonymous","D59N G86S S129H",3
"lib2","SARS-CoV-2","TACCAAAAAAATGAAT",1,26.27,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A42T G83K A105P Y123E Q168R P197T",6
"lib2","SARS-CoV-2","TACCAAAAAGAAAGCG",3,105.3,10.74,-0.1,0.04,2.88,1.14,0,">1 nonsynonymous","L60Y V65F",2
"lib2","SARS-CoV-2","TACCAAAACGAATATC",2,12.74,10.72,-0.12,0.07,3,1,0,">1 nonsynonymous","T3V K87M",2
"lib2","SARS-CoV-2","TACCAAAAGAGTTACC",1,30.04,10.82,-0.01,0.04,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCAAAATGTATAAG",6,47.36,7.32,-3.52,0.27,1.5,1.18,0.02,">1 nonsynonymous","V103M L125A F134T",3
"lib2","SARS-CoV-2","TACCAAAATGTATAGA",3,34.38,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T15Y Y66S A81V F134M E141H C158S S200Y",7
"lib2","SARS-CoV-2","TACCAAAATTCATTCG",9,311.94,10.26,-0.57,0.02,2.88,1.03,0,"1 nonsynonymous","L57D",1
"lib2","SARS-CoV-2","TACCAAAATTTTCTTT",9,73.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S19V N107Q",2
"lib2","SARS-CoV-2","TACCAAACGAGGATTC",14,313.36,10.85,0.01,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCAAAGAATATATG",1,13.31,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K94E K128V R136M",3
"lib2","SARS-CoV-2","TACCAAATAGATCCCT",7,31.79,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I2A P82L Y91H F99L",4
"lib2","SARS-CoV-2","TACCAAATAGTATTCT",9,33.76,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","A18C T100N W106E S139T",4
"lib2","SARS-CoV-2","TACCAAATAGTTCTAG",1,5.09,7.58,-3.26,0.24,1.95,1.18,0.03,">1 nonsynonymous","A14S A81G Q144L",3
"lib2","SARS-CoV-2","TACCAAATCAAACCAC",2,19.6,8.27,-2.57,0.26,1.5,1,0.03,">1 nonsynonymous","L5P C49Q",2
"lib2","SARS-CoV-2","TACCAAATCCTTTCTA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y K87E Y121L",3
"lib2","SARS-CoV-2","TACCAAATGAGAGATG",3,23.04,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","Q79H D98S C102F",3
"lib2","SARS-CoV-2","TACCAAATGTGCCCCC",11,1.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162R",1
"lib2","SARS-CoV-2","TACCAAATTTAACAAC",1,23.18,8.66,-2.18,0.15,1.75,1.19,0.01,">1 nonsynonymous","L60P K87M P133Q",3
"lib2","SARS-CoV-2","TACCAACAACACACCC",2,0.98,NA,NA,NA,NA,NA,NA,"stop","Q163*",1
"lib2","SARS-CoV-2","TACCAACATTAGAAAT",7,0,NA,NA,NA,NA,NA,NA,"stop","W106* Y119V R179G L183M",4
"lib2","SARS-CoV-2","TACCAACCATACAGAT",6,19.38,6.82,-4.02,0.24,1.5,1.08,0.01,">1 nonsynonymous","V11S F185R",2
"lib2","SARS-CoV-2","TACCAACCATGAAACA",4,45.16,9.81,-1.02,0.09,1.61,1.06,0,">1 nonsynonymous","Y21F E76A A105T",3
"lib2","SARS-CoV-2","TACCAACCCTCCACAT",8,1.99,NA,NA,NA,NA,NA,NA,"stop","A105I S129Q P191* S200W",4
"lib2","SARS-CoV-2","TACCAACCGAGAGAAA",1,47.05,9.51,-1.32,0.12,1.95,1.07,0.01,"1 nonsynonymous","D137V",1
"lib2","SARS-CoV-2","TACCAACGAAACAGAG",5,41.86,10.69,-0.14,0.07,2.88,1.11,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","TACCAACGGAACTTAT",4,26.14,10.82,-0.02,0.09,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCAACTACTCCCGG",14,135.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T140P R179G",2
"lib2","SARS-CoV-2","TACCAACTCTTAAATA",4,30.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4L A22S N107R Y123S Y178N",5
"lib2","SARS-CoV-2","TACCAACTTAGACATT",3,37.48,10.85,0.01,0.06,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TACCAAGATTTTTATC",8,0.81,NA,NA,NA,NA,NA,NA,"stop","G51Q F134* T170E",3
"lib2","SARS-CoV-2","TACCAAGCACACACAT",16,180.58,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C6S L131R K198V",3
"lib2","SARS-CoV-2","TACCAAGCACGTCCCC",13,45.47,6.08,-4.75,0.33,1.62,1.09,0,">1 nonsynonymous","C61F P82D D90N",3
"lib2","SARS-CoV-2","TACCAAGTCTAAAGTT",3,28.98,10.31,-0.53,0.07,2.88,1.1,0,"1 nonsynonymous","N171C",1
"lib2","SARS-CoV-2","TACCAAGTGATTAGAC",3,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V A22T V65F T201V",4
"lib2","SARS-CoV-2","TACCAAGTGTCGCAGG",9,126.99,8.72,-2.12,0.05,2.83,1.09,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","TACCAATAATGGCGTA",7,41.33,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S36C E76Y A105F",3
"lib2","SARS-CoV-2","TACCAATAGCCACGAA",6,52.74,10.81,-0.02,0.04,3,1.03,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","TACCAATATATTCCAG",16,193.64,9.68,-1.16,0.06,2.07,1.04,0,">1 nonsynonymous","N4G C61P A105C",3
"lib2","SARS-CoV-2","TACCAATCATTCAATG",2,43.84,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S53F F70R G86V Q176A",4
"lib2","SARS-CoV-2","TACCAATCCAAAGCGT",3,24.82,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6I N109D Y119F N130S C150F",5
"lib2","SARS-CoV-2","TACCAATGAATGCCTA",5,69.26,10.86,0.03,0.06,2.89,1.13,0,"1 nonsynonymous","R27N",1
"lib2","SARS-CoV-2","TACCAATGTTCAGACA",9,1.33,NA,NA,NA,NA,NA,NA,"stop","R27A G74F T85G T100L F167*",5
"lib2","SARS-CoV-2","TACCAATTAGCCAAAA",1,11.53,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6G F12L A14D Y93W F99L T170R",6
"lib2","SARS-CoV-2","TACCAATTATGGTTCA",18,235.32,10.69,-0.14,0.03,2.95,1.05,0,">1 nonsynonymous","R25S V37F",2
"lib2","SARS-CoV-2","TACCAATTCTTTCCAA",3,49.01,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","F167G",1
"lib2","SARS-CoV-2","TACCAATTGACCTCAC",8,26.48,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","L60E V77P Y119T G152S",4
"lib2","SARS-CoV-2","TACCAATTGAGCCATT",4,82.33,10.73,-0.1,0.02,2.97,1.05,0,"1 nonsynonymous","N64P",1
"lib2","SARS-CoV-2","TACCAATTGGGCGGCA",4,49,10.94,0.11,0.06,2.92,1.1,0,">1 nonsynonymous","P54L S129R",2
"lib2","SARS-CoV-2","TACCAATTTACCAGAC",10,82.57,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R27D C61R L95C N118F E141G Q163W",6
"lib2","SARS-CoV-2","TACCAATTTAGATGCG",8,6.58,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A42S C61L D75Y T100P",4
"lib2","SARS-CoV-2","TACCAATTTAGGGCTT",2,57.77,9.96,-0.87,0.06,2.83,1,0,">1 nonsynonymous","A33W I72A",2
"lib2","SARS-CoV-2","TACCAATTTATGAGTA",5,43.85,6.17,-4.67,1.09,1.5,1.26,0.04,">1 nonsynonymous","L5S P82F E141L",3
"lib2","SARS-CoV-2","TACCACAAACTGTAAT",10,160.25,10.3,-0.53,0.06,2.94,1.09,0,">1 nonsynonymous","G9L Y39H V115E",3
"lib2","SARS-CoV-2","TACCACAAAGGTGGCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87P D137A",2
"lib2","SARS-CoV-2","TACCACAAATCGTTCT",2,29.5,10.43,-0.41,0.05,2.94,1.05,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","TACCACAACTATAAAT",5,36.73,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","S36L T100F D112R P161T",4
"lib2","SARS-CoV-2","TACCACACGATCACAT",3,51.65,8.58,-2.26,0.08,2.13,1.1,0,">1 nonsynonymous","N118L E141M",2
"lib2","SARS-CoV-2","TACCACAGAGACCCTA",5,44.47,9.24,-1.59,0.05,2.81,1.1,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","TACCACAGATCATAAT",4,91.4,10.75,-0.08,0.04,2.91,1.1,0,"1 nonsynonymous","S53R",1
"lib2","SARS-CoV-2","TACCACAGCCTAGGGG",2,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L N107G L162A",3
"lib2","SARS-CoV-2","TACCACATAACCCATG",20,179.92,9.52,-1.32,0.07,2.07,1.06,0,">1 nonsynonymous","A14T P161S",2
"lib2","SARS-CoV-2","TACCACATAATAGAAA",2,32.84,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L60V I80K N92T N109Y Y175W",5
"lib2","SARS-CoV-2","TACCACATGCAATTCA",5,138.05,10.15,-0.68,0.03,2.9,1.04,0,">1 nonsynonymous","V11Y A190T",2
"lib2","SARS-CoV-2","TACCACATTAGGGGTA",3,25.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S Y39H L95C Y119L S139H T201Q",6
"lib2","SARS-CoV-2","TACCACCAACATCCTG",1,15.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V11H Y39M N58L D68R D97W",5
"lib2","SARS-CoV-2","TACCACCAGACAGACC",5,32,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","L38T N120S R127E Y165N G172R",5
"lib2","SARS-CoV-2","TACCACCCCATGTCAG",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76V D97I Y121T K128D D137I P149N",6
"lib2","SARS-CoV-2","TACCACCCTAACTCTA",5,36.7,8.03,-2.8,0.15,1.71,1.06,0.01,">1 nonsynonymous","R27K Y119C E135K E141R",4
"lib2","SARS-CoV-2","TACCACCCTGACGCTA",3,113.47,10.73,-0.1,0.03,2.97,1.04,0,"1 nonsynonymous","N58M",1
"lib2","SARS-CoV-2","TACCACCGAACGAATA",3,115.91,10.8,-0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCACCGTGTTGTTC",1,11.47,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","N13Y N64S G86T I88Y K114H G174E",6
"lib2","SARS-CoV-2","TACCACCTGTATCTGA",4,68.36,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S19L P96H Y121D N157T",4
"lib2","SARS-CoV-2","TACCACGCTCGACAAT",10,110.45,9.86,-0.98,0.07,2.1,1.03,0,"1 nonsynonymous","F99V",1
"lib2","SARS-CoV-2","TACCACTAAATTTGAA",4,36.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28R S36K F70S C158I",4
"lib2","SARS-CoV-2","TACCACTAACCGGCGA",1,17.08,10.44,-0.39,0.09,2.91,1.1,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","TACCACTATAGTCTGT",3,43.59,10.79,-0.05,0.04,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCACTCCAGGTCGC",3,15.37,9.14,-1.7,0.08,2.46,1.1,0,">1 nonsynonymous","A42Q C61Y P149T P161S",4
"lib2","SARS-CoV-2","TACCACTCGACGTATC",9,3.36,NA,NA,NA,NA,NA,NA,"stop","A14T D97T I104* T148D",4
"lib2","SARS-CoV-2","TACCACTGCACGGCCG",8,429.77,10.58,-0.26,0.03,2.93,1.07,0,">1 nonsynonymous","D59G T148Y",2
"lib2","SARS-CoV-2","TACCACTGCGAACCCT",4,46.06,10.85,0.02,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCACTGTACACTAT",2,42.52,8.67,-2.17,0.14,2.91,1.09,0.01,">1 nonsynonymous","Y119I T170A",2
"lib2","SARS-CoV-2","TACCAGAAAAATTATA",1,21.52,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y50C T85M A89I Q144T Y178N T201N",6
"lib2","SARS-CoV-2","TACCAGAAGCTTACCG",18,7.01,NA,NA,NA,NA,NA,NA,"stop","F62L A81F K87L D98*",4
"lib2","SARS-CoV-2","TACCAGAATCCGTGAT",2,19.19,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S45I Y121F V173A F185D",4
"lib2","SARS-CoV-2","TACCAGAATGTTTTTG",3,74.71,10.29,-0.55,0.04,2.67,1,0,">1 nonsynonymous","K114R S139Y",2
"lib2","SARS-CoV-2","TACCAGAATTCAGTTA",5,32.79,8.5,-2.34,0.37,1.5,1.07,0.04,"1 nonsynonymous","R127P",1
"lib2","SARS-CoV-2","TACCAGAGATCCCTTC",8,48.96,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10T D34E F99W A105S V180W",5
"lib2","SARS-CoV-2","TACCAGAGCAAAAAAT",6,149.36,8.79,-2.04,0.05,2.95,1.08,0,">1 nonsynonymous","G9E S113V",2
"lib2","SARS-CoV-2","TACCAGAGCAATAGGG",1,8.21,9.2,-1.64,0.09,3,1,0,">1 nonsynonymous","K87P L125F A190P",3
"lib2","SARS-CoV-2","TACCAGAGGCTCGACC",4,74.23,10.42,-0.42,0.05,2.96,1.03,0,">1 nonsynonymous","P7T Y35S",2
"lib2","SARS-CoV-2","TACCAGAGTACATATT",8,18.02,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G101Y S108A E135I",3
"lib2","SARS-CoV-2","TACCAGATACCAACCA",3,49.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I80W G117F R124Q E141N",4
"lib2","SARS-CoV-2","TACCAGATGATAATCG",8,61.87,6.43,-4.4,0.41,1.5,1.19,0.01,">1 nonsynonymous","S36L T46N C61S S113R Y159K",5
"lib2","SARS-CoV-2","TACCAGATTTATTTAG",4,143.84,10.43,-0.41,0.05,2.93,1.09,0,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","TACCAGCAATCTAATC",10,150.05,9.02,-1.81,0.07,2.81,1.13,0,">1 nonsynonymous","G117C T201D",2
"lib2","SARS-CoV-2","TACCAGCACCTACGAC",1,0.14,NA,NA,NA,NA,NA,NA,"stop","A105* G146P",2
"lib2","SARS-CoV-2","TACCAGCCGGCCAGAC",4,102.71,9.98,-0.86,0.03,2.97,1.04,0,"1 nonsynonymous","F156N",1
"lib2","SARS-CoV-2","TACCAGCGACTGAAAT",4,22.94,8.86,-1.97,0.26,1.5,1.1,0.04,">1 nonsynonymous","D98V W106R",2
"lib2","SARS-CoV-2","TACCAGCGATAAGTGC",9,285.97,9.13,-1.71,0.04,2.78,1.1,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","TACCAGCTCTAAAAAC",3,23.63,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56P I88R Y165I",3
"lib2","SARS-CoV-2","TACCAGCTGTTTATTT",16,197.83,9.93,-0.91,0.07,2.3,1.05,0,">1 nonsynonymous","V52N L60I",2
"lib2","SARS-CoV-2","TACCAGGAACGGGTTA",3,43.9,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N13L D90S F156I G172S",4
"lib2","SARS-CoV-2","TACCAGGCTTAGCCAA",2,5.25,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","F99R S113C Y119S Y143H",4
"lib2","SARS-CoV-2","TACCAGGGCGACAATT",7,110.08,8.99,-1.84,0.07,1.75,1.08,0,">1 nonsynonymous","R16L T100K N107V",3
"lib2","SARS-CoV-2","TACCAGGTATGACTTG",4,83.92,10.8,-0.04,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCAGTAGGCCAACT",1,15.33,7.02,-3.82,0.47,1.5,1.06,0.05,">1 nonsynonymous","C6F R27I R124T I138L",4
"lib2","SARS-CoV-2","TACCAGTATTTCCGAT",4,1.6,NA,NA,NA,NA,NA,NA,"stop","F8* G146V T201M",3
"lib2","SARS-CoV-2","TACCAGTCTAGTGCTA",1,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I V103R",2
"lib2","SARS-CoV-2","TACCAGTGAAACGATA",6,126.75,10.1,-0.73,0.06,2.54,1.06,0,"1 nonsynonymous","C102M",1
"lib2","SARS-CoV-2","TACCAGTTAAAAAAGG",6,153.07,10.62,-0.22,0.03,2.87,1.07,0,"1 nonsynonymous","N58T",1
"lib2","SARS-CoV-2","TACCATAAAAACTCTT",4,0,NA,NA,NA,NA,NA,NA,"stop","T63* K87S A190V",3
"lib2","SARS-CoV-2","TACCATAAAAGTCCTA",1,8.04,6,-4.84,2,1.5,1.03,0.02,">1 nonsynonymous","C6I A105V K128F S147F",4
"lib2","SARS-CoV-2","TACCATACAAATACCA",3,10.63,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","L5R D34L S45E P149V F167V",5
"lib2","SARS-CoV-2","TACCATACATACTATA",7,64.05,10.1,-0.74,0.09,2.56,1.02,0,">1 nonsynonymous","K48G T55L S129G P197K",4
"lib2","SARS-CoV-2","TACCATAGCGAACCAC",3,102.73,9.25,-1.59,0.04,2.94,1.08,0,">1 nonsynonymous","Y119H Y143H",2
"lib2","SARS-CoV-2","TACCATAGTGAGAACC",3,14.59,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C49L Y119D R179A",3
"lib2","SARS-CoV-2","TACCATATGAATACGG",2,2.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113F E141S P169G Y178D",4
"lib2","SARS-CoV-2","TACCATATTCACTGCG",1,23.39,8.71,-2.12,0.14,2.31,1.03,0.01,">1 nonsynonymous","F8V R27C Y119R",3
"lib2","SARS-CoV-2","TACCATCAAAGGATAA",13,4.08,NA,NA,NA,NA,NA,NA,"stop","S36* K94L T148M",3
"lib2","SARS-CoV-2","TACCATCAAATAAAAA",4,6.38,6,-4.84,2,3,1.03,0,">1 nonsynonymous","C61A N107M R124C A145V",4
"lib2","SARS-CoV-2","TACCATCACTTTAGTA",5,30.39,9.6,-1.24,0.07,2.29,1,0,">1 nonsynonymous","T55R N120L R136S",3
"lib2","SARS-CoV-2","TACCATCATCTGAACC",2,53.01,7.64,-3.2,0.15,2.05,1.11,0.01,">1 nonsynonymous","C158R A190V",2
"lib2","SARS-CoV-2","TACCATCGGCCTGCTT",3,16.88,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13C K26V Y123M P149C",4
"lib2","SARS-CoV-2","TACCATCTACACGTCA",10,0.5,NA,NA,NA,NA,NA,NA,"stop","G9* W23* T85H Y91S",4
"lib2","SARS-CoV-2","TACCATCTTGATTTAC",5,6.02,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TACCATGAAACCTGCT",3,3.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18F L131N",2
"lib2","SARS-CoV-2","TACCATGACCTCCGAT",14,109.89,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F17A G83M N151F G155T Y165M",5
"lib2","SARS-CoV-2","TACCATGCATTTTGCA",3,33.07,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9Y G101Y",2
"lib2","SARS-CoV-2","TACCATGCTAGATTCA",5,53.29,8.12,-2.71,0.55,1.5,1,0.08,">1 nonsynonymous","N30R I88D G101M Q168L",4
"lib2","SARS-CoV-2","TACCATGGATTATCAT",6,137,9.77,-1.06,0.04,2.82,1.03,0,">1 nonsynonymous","C6N K87Y V115H N130M",4
"lib2","SARS-CoV-2","TACCATGGGACCATAT",2,6.35,6.11,-4.72,0.21,3,1,0,">1 nonsynonymous","S41H K132T L183T",3
"lib2","SARS-CoV-2","TACCATGTCAAACATA",3,18.57,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34T P54S D90V Y143C",4
"lib2","SARS-CoV-2","TACCATTAAGATGTAG",2,11.64,6,-4.84,2,3,1.04,0,">1 nonsynonymous","R27G D137Y G146W",3
"lib2","SARS-CoV-2","TACCATTAGGGAAAAA",4,57.01,8.81,-2.03,0.06,3,1.07,0,"1 nonsynonymous","T170D",1
"lib2","SARS-CoV-2","TACCATTATCCAGCAT",4,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S45P R73L Q84H D98V",5
"lib2","SARS-CoV-2","TACCATTCAAATTGAA",6,2.31,NA,NA,NA,NA,NA,NA,"stop","W23T Y35C C61* Y93P",4
"lib2","SARS-CoV-2","TACCATTCACAATAAC",3,25.71,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2D T100Q N130T S139H V180S",5
"lib2","SARS-CoV-2","TACCATTCCGTTACCG",4,58.84,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I2L F12V C49Y G86F Y93L P177N",6
"lib2","SARS-CoV-2","TACCATTGCAGGCCCA",7,2.17,NA,NA,NA,NA,NA,NA,"stop","C6F C102* S129R T201A",4
"lib2","SARS-CoV-2","TACCATTTACATCAAA",3,77.95,7.18,-3.65,0.27,1.5,1.15,0.02,">1 nonsynonymous","Y35S D68M",2
"lib2","SARS-CoV-2","TACCATTTCCGATTTA",1,18.48,10.71,-0.13,0.06,2.91,1.04,0,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","TACCCAAACAACTTCA",4,0.92,NA,NA,NA,NA,NA,NA,"stop","S45L T55* N151S T201Q",4
"lib2","SARS-CoV-2","TACCCAAACAGATATA",10,21.62,7.86,-2.98,0.32,1.5,1.12,0.04,">1 nonsynonymous","N13M Y121S Q163T T201M",4
"lib2","SARS-CoV-2","TACCCAAATGCGACTT",5,87.32,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2C F62N A81D A89S C158L",5
"lib2","SARS-CoV-2","TACCCAAATTGCAATG",10,58.53,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I88Q D137L",2
"lib2","SARS-CoV-2","TACCCAACAAAGCCAA",9,43.11,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89P A105G S113M",3
"lib2","SARS-CoV-2","TACCCAACTCAGAGTC",7,1.65,NA,NA,NA,NA,NA,NA,"stop","A42V G83I N130*",3
"lib2","SARS-CoV-2","TACCCAAGCAAGCCCT",13,93.06,9.86,-0.98,0.07,2.08,1.06,0,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","TACCCAAGGCAAAATA",10,144.78,10.51,-0.32,0.05,2.93,1.05,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","TACCCAAGGCCATGAG",3,23.66,6.01,-4.83,0.97,1.5,1.21,0.02,">1 nonsynonymous","L38K T100I I104S G116Y Y143F",5
"lib2","SARS-CoV-2","TACCCAAGTAGGAAGT",1,47.08,10.81,-0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCCAATTTGCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89T T148S Q168S",3
"lib2","SARS-CoV-2","TACCCACACACACCGG",5,7.23,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N4A T15P V37S W106R G146L",5
"lib2","SARS-CoV-2","TACCCACCTGAAAGAA",4,11.48,10.88,0.05,0.1,2.85,1.2,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","TACCCACGCGATACTT",1,48.87,6,-4.84,1.03,1.5,1.2,0.02,">1 nonsynonymous","T46M T100I S129M Q144E V153R P177T T201L",7
"lib2","SARS-CoV-2","TACCCACTGGAAGCAT",3,76.18,9.35,-1.48,0.15,1.75,1.06,0.01,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","TACCCAGAAGTCCAAT",10,159.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2K A14R N30M Q84H N107T Y143A",6
"lib2","SARS-CoV-2","TACCCAGACCAATTAC",1,16.26,9.3,-1.53,0.42,1.75,1.12,0.07,">1 nonsynonymous","T3K D68V V77F Y123L S200A",5
"lib2","SARS-CoV-2","TACCCAGACCTTGACT",1,49.15,8.34,-2.5,0.15,1.96,1.08,0.01,"1 nonsynonymous","S113P",1
"lib2","SARS-CoV-2","TACCCAGCGACCAAGA",1,13.65,7.19,-3.65,0.49,2.04,1.2,0.02,">1 nonsynonymous","V11N T63R P169C",3
"lib2","SARS-CoV-2","TACCCAGCTACTTCTC",6,17.03,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","G74R D112R Y123V N151L",4
"lib2","SARS-CoV-2","TACCCAGGACAAAACC",4,108.94,7.67,-3.17,0.11,1.5,1.05,0,">1 nonsynonymous","V32L R73A Y121A E154N",4
"lib2","SARS-CoV-2","TACCCAGGGCATTAGT",7,43.51,6.26,-4.58,1.04,1.5,1.3,0.05,">1 nonsynonymous","I2A S53F C102S G146L",4
"lib2","SARS-CoV-2","TACCCAGTAGAATCCA",9,193.68,10.82,-0.01,0.04,2.96,1.05,0,"1 nonsynonymous","R78P",1
"lib2","SARS-CoV-2","TACCCATAAATCCAAG",2,20.76,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I88N F99A K114H N120F F160E C195S",6
"lib2","SARS-CoV-2","TACCCATACCTCTATT",1,10.07,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G117I Y175T",2
"lib2","SARS-CoV-2","TACCCATATCATCTTC",2,14.16,6.69,-4.14,0.48,1.5,1.03,0.06,"1 nonsynonymous","Y178P",1
"lib2","SARS-CoV-2","TACCCATCGAGCGCCT",11,80.98,8.07,-2.77,0.2,1.5,1.13,0.01,"1 nonsynonymous","E76I",1
"lib2","SARS-CoV-2","TACCCATCTCATAGAA",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I K56L L122Q",3
"lib2","SARS-CoV-2","TACCCATGAGAAGGAA",3,25.64,10.22,-0.61,0.05,2.95,1,0,"1 nonsynonymous","A81H",1
"lib2","SARS-CoV-2","TACCCATGCAAAGCCA",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M K114R C150R",3
"lib2","SARS-CoV-2","TACCCATGGGACCCCT",5,19.47,7.22,-3.62,0.35,1.5,1.2,0.03,">1 nonsynonymous","R25D N130V",2
"lib2","SARS-CoV-2","TACCCATTACCTTAAT",3,24.62,10.64,-0.2,0.04,2.93,1.07,0,">1 nonsynonymous","R16K S53F L60A",3
"lib2","SARS-CoV-2","TACCCATTTGTGATCA",2,104.3,10.58,-0.26,0.04,3,1,0,">1 nonsynonymous","T3S F156P",2
"lib2","SARS-CoV-2","TACCCCAAAAAGCTAT",15,127.76,6.73,-4.11,0.31,1.5,1.13,0.01,">1 nonsynonymous","S45T G86S A105T",3
"lib2","SARS-CoV-2","TACCCCAAAACCTCTT",9,6.34,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N13A S41Y L95R",3
"lib2","SARS-CoV-2","TACCCCAAGAACCTGT",5,76.74,8.77,-2.07,0.09,2.77,1.11,0,">1 nonsynonymous","R16S S113R",2
"lib2","SARS-CoV-2","TACCCCAAGACTCTAA",1,0.25,NA,NA,NA,NA,NA,NA,"stop","A89K Q168*",2
"lib2","SARS-CoV-2","TACCCCACAAATTCAA",1,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129I P161I",2
"lib2","SARS-CoV-2","TACCCCAGAATATAAT",4,90.3,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4M D90S D97V W106A N171I Q176K",6
"lib2","SARS-CoV-2","TACCCCAGACTAATCG",12,4.96,NA,NA,NA,NA,NA,NA,"stop","G74S K87*",2
"lib2","SARS-CoV-2","TACCCCAGTTCCGAAC",1,18.96,8.41,-2.42,0.25,1.84,1.08,0.02,">1 nonsynonymous","S139D G146V",2
"lib2","SARS-CoV-2","TACCCCATAATGCCTG",7,67.4,10.76,-0.08,0.05,2.96,1.07,0,">1 nonsynonymous","A18V L188T",2
"lib2","SARS-CoV-2","TACCCCATACCCAATA",1,7.57,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","E10M A89E",2
"lib2","SARS-CoV-2","TACCCCATTATAACGC",1,27.03,10.5,-0.33,0.07,2.81,1.04,0,">1 nonsynonymous","G83Y D97I",2
"lib2","SARS-CoV-2","TACCCCCAACAAATAG",7,48.76,10.73,-0.1,0.05,2.97,1.03,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TACCCCCACAGGCTAT",4,12.73,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C102L L131S F185R",3
"lib2","SARS-CoV-2","TACCCCCATACGCGGA",9,97.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K56N T85A L95P N120H G155C T170L",6
"lib2","SARS-CoV-2","TACCCCCATTCGCCCA",1,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97R Y165C T170V",3
"lib2","SARS-CoV-2","TACCCCCCAAAATAAC",2,21.28,10.88,0.04,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCCCCCAAGGTTTG",4,78.3,10.86,0.02,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TACCCCCCCGCTACTG",4,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T F47I A89E Y143W",4
"lib2","SARS-CoV-2","TACCCCCCGTAAAACG",10,175.54,10.55,-0.29,0.05,2.87,1.08,0,">1 nonsynonymous","A42N D98W K128S",3
"lib2","SARS-CoV-2","TACCCCCTAAATTACA",2,36.1,10.21,-0.62,0.09,2.31,1.06,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","TACCCCGATCCACACC",1,19.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14S S69W G86A",3
"lib2","SARS-CoV-2","TACCCCGCCTAACATA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib2","SARS-CoV-2","TACCCCGCTCAGACAG",6,22.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F70C T85G D90L N107G V173F",5
"lib2","SARS-CoV-2","TACCCCGGACACCCTT",10,140.85,9.49,-1.35,0.04,2.82,1.1,0,"1 nonsynonymous","R73P",1
"lib2","SARS-CoV-2","TACCCCGGTACCGTTT",3,5.86,6,-4.84,2,1.5,1.04,0.02,">1 nonsynonymous","T63C P96W T100N N110T F126L G152P",6
"lib2","SARS-CoV-2","TACCCCTCAAATTTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W A89M K114W R127L G152A F156L F167S Q176R",8
"lib2","SARS-CoV-2","TACCCCTCATTACGGC",2,56.06,10.88,0.05,0.05,2.96,1.06,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","TACCCCTCTTAACGGG",2,19.32,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95S W106G S139R",3
"lib2","SARS-CoV-2","TACCCCTGAAGTAGTA",1,22.81,6,-4.84,2,3,1.09,0,"1 nonsynonymous","Y93A",1
"lib2","SARS-CoV-2","TACCCCTGCCCCCCAC",14,1.27,NA,NA,NA,NA,NA,NA,"stop","N1* W106* S139P",3
"lib2","SARS-CoV-2","TACCCCTTAGTTGCAT",8,145.29,9.67,-1.17,0.12,1.86,1.07,0.01,"1 nonsynonymous","D68T",1
"lib2","SARS-CoV-2","TACCCCTTCACCGCCT",1,31.35,6,-4.84,2,2.31,1.09,0,">1 nonsynonymous","V37S D97N F126Y D137T",4
"lib2","SARS-CoV-2","TACCCGAAAAACATTA",2,10.36,6.1,-4.73,0.55,1.5,1.05,0.01,">1 nonsynonymous","L95S N107H Y119C L125S P149Y",5
"lib2","SARS-CoV-2","TACCCGAAAAGTCAAC",1,0.98,NA,NA,NA,NA,NA,NA,"stop","I104Y D112E A192*",3
"lib2","SARS-CoV-2","TACCCGAAATGGTAGA",4,83.27,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F70H F134L",2
"lib2","SARS-CoV-2","TACCCGAATCCATACT",1,21.12,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","C6F L122P",2
"lib2","SARS-CoV-2","TACCCGAGAAAAAGGC",1,23.8,10.76,-0.08,0.07,2.92,1.14,0,">1 nonsynonymous","Y35M C61S A190K",3
"lib2","SARS-CoV-2","TACCCGAGCGAAGCTA",7,46.4,6.28,-4.56,0.6,1.5,1.19,0.02,">1 nonsynonymous","V52S I88R F126K C150Y",4
"lib2","SARS-CoV-2","TACCCGAGCTTTATTT",8,48.41,6.58,-4.25,0.73,1.5,1.2,0.05,">1 nonsynonymous","S19L Y35L K87E K132T",4
"lib2","SARS-CoV-2","TACCCGATTCCGTGGT",7,49.57,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","G101H S147K S200C",3
"lib2","SARS-CoV-2","TACCCGCAAACTTCTA",5,12.53,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","G51V N107S F185M",3
"lib2","SARS-CoV-2","TACCCGCCTTAAAAAG",9,0,NA,NA,NA,NA,NA,NA,"stop","F12N A18* C31R T55I V71Q Y165H",6
"lib2","SARS-CoV-2","TACCCGCGCTTATAAT",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Y A22V S41H I104T",4
"lib2","SARS-CoV-2","TACCCGGACATACTTA",2,19.46,10.49,-0.34,0.08,2.94,1.07,0,">1 nonsynonymous","D90W L122T",2
"lib2","SARS-CoV-2","TACCCGGATGCGAAAT",4,75.23,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A81D D112I",2
"lib2","SARS-CoV-2","TACCCGGGTAATAATA",1,7.28,6.3,-4.53,0.9,1.5,1.1,0.05,">1 nonsynonymous","I28W P54Q E141L Y165C",4
"lib2","SARS-CoV-2","TACCCGGTAAGTATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TACCCGTAGCAATTCA",5,3.37,NA,NA,NA,NA,NA,NA,"stop","N40* Y93A I138G L183C K198M",5
"lib2","SARS-CoV-2","TACCCGTATCGACTCA",5,48.64,9.41,-1.42,0.04,2.85,1.01,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TACCCGTCAAAACCCT",11,157.11,10.82,-0.02,0.04,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCCGTCACCAATAA",2,70.15,10.72,-0.11,0.02,2.95,1.04,0,">1 nonsynonymous","V77L I104L",2
"lib2","SARS-CoV-2","TACCCGTCAGTACAAG",1,12.86,9.98,-0.86,0.14,2.64,1.28,0.01,">1 nonsynonymous","Y35S K87R",2
"lib2","SARS-CoV-2","TACCCGTGAAAAAAAA",4,1.75,NA,NA,NA,NA,NA,NA,"stop","G9E Y35* T55G",3
"lib2","SARS-CoV-2","TACCCGTGGCCATACA",7,7.28,6.59,-4.25,0.99,1.5,1.19,0.04,">1 nonsynonymous","N4S E10M A33V A81Y I138M",5
"lib2","SARS-CoV-2","TACCCGTGGTCGCGGT",2,39.78,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","Y35S K48T Y66H P177F S184P",5
"lib2","SARS-CoV-2","TACCCGTTGGGGGAGT",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126I P197A",2
"lib2","SARS-CoV-2","TACCCTAAAATAACTT",9,26.43,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F99P P133T",2
"lib2","SARS-CoV-2","TACCCTAACAATTTGT",4,0.14,NA,NA,NA,NA,NA,NA,"stop","F8T L38* K48L A67L P149L",5
"lib2","SARS-CoV-2","TACCCTAAGTTTAAAA",22,6.55,NA,NA,NA,NA,NA,NA,"stop","D90* Q163H",2
"lib2","SARS-CoV-2","TACCCTAATGTCCGTG",4,1.2,NA,NA,NA,NA,NA,NA,"stop","Y39* F44N T100I F160Y L188H",5
"lib2","SARS-CoV-2","TACCCTAATTCTTGTA",1,10.41,10.74,-0.1,0.08,2.91,1.02,0,">1 nonsynonymous","T15V L57M N64L S147W",4
"lib2","SARS-CoV-2","TACCCTACCTTTTGTA",3,196.97,9.41,-1.42,0.04,2.77,1.06,0,">1 nonsynonymous","Q176H A190C",2
"lib2","SARS-CoV-2","TACCCTACGCAGACTG",2,13.54,NA,NA,NA,NA,NA,0.26,"1 nonsynonymous","N92P",1
"lib2","SARS-CoV-2","TACCCTACTACTTAAC",8,128.23,10.86,0.03,0.06,2.93,1.08,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","TACCCTAGAGCGCGAA",2,13.25,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A105D N120T N157F",3
"lib2","SARS-CoV-2","TACCCTAGTAAATGCA",1,5.75,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","Y66D Q84V S113G S139L",4
"lib2","SARS-CoV-2","TACCCTATACATACTA",6,34.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41L I88R N107S Y119L",4
"lib2","SARS-CoV-2","TACCCTATAGAGATGA",1,7.29,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","TACCCTATCGAAATTC",5,22.42,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V37A V71S A89T S139Y Y178C",5
"lib2","SARS-CoV-2","TACCCTCAAGAGTAAT",1,0.26,NA,NA,NA,NA,NA,NA,"stop","L5* D98S G174P",3
"lib2","SARS-CoV-2","TACCCTCACGCCGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N A42Y",2
"lib2","SARS-CoV-2","TACCCTCAGGTGCAAG",12,57.65,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","F62I A105P G117F",3
"lib2","SARS-CoV-2","TACCCTCTCCATTTAA",6,124.27,8.92,-1.92,0.07,2.8,1.08,0,">1 nonsynonymous","F62G Q168V",2
"lib2","SARS-CoV-2","TACCCTCTCCCAAAAA",3,16.66,9.49,-1.35,0.14,2.12,1.03,0.01,">1 nonsynonymous","L5W T15L S29E G83R D90S Q168S",6
"lib2","SARS-CoV-2","TACCCTCTGACAAGGT",2,2.68,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","TACCCTGAAGACTCAA",4,24.36,6,-4.84,1.78,1.5,1.17,0.03,">1 nonsynonymous","L5M A42S I88K E135G N151V",5
"lib2","SARS-CoV-2","TACCCTGATTTCATAT",4,32,9.5,-1.33,0.05,2.33,1.01,0,">1 nonsynonymous","N30S L60A G152P",3
"lib2","SARS-CoV-2","TACCCTGCTGGCGTCA",10,94.64,8.66,-2.18,0.18,1.5,1.1,0.01,">1 nonsynonymous","V11F A89R",2
"lib2","SARS-CoV-2","TACCCTGTAAGACGGT",2,10.74,10.7,-0.14,0.4,2.33,1,0.04,"wildtype","",0
"lib2","SARS-CoV-2","TACCCTGTGATTTCAA",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98T G155D",2
"lib2","SARS-CoV-2","TACCCTGTTTGCCAAA",3,11.93,11.03,0.19,0.08,3,1.04,0,">1 nonsynonymous","L5P V37D N110E",3
"lib2","SARS-CoV-2","TACCCTTACATTCGCT",1,16.67,8.67,-2.17,0.21,2.76,1.31,0.01,">1 nonsynonymous","S41Q N118P",2
"lib2","SARS-CoV-2","TACCCTTATAAGGCTT",16,81.4,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8A T46R G86T F99R",4
"lib2","SARS-CoV-2","TACCCTTATGATTTTG",3,38.79,9.66,-1.18,0.1,2.12,1.08,0,">1 nonsynonymous","V103T T148F",2
"lib2","SARS-CoV-2","TACCCTTTCCGCGTAT",8,28.59,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","A14E C49S P96L",3
"lib2","SARS-CoV-2","TACCGAAAACCATATA",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N4D A14*",2
"lib2","SARS-CoV-2","TACCGAAAACTTGCAT",2,51.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21V R73I",2
"lib2","SARS-CoV-2","TACCGAAACTAAAAAC",1,23.25,9.62,-1.22,0.12,2.14,1.1,0.01,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","TACCGAAATCTTGCCG",12,204.21,10.59,-0.24,0.03,2.89,1.07,0,">1 nonsynonymous","L60F I138K",2
"lib2","SARS-CoV-2","TACCGAACCAGCTAGT",5,0.27,NA,NA,NA,NA,NA,NA,"stop","G83S D97M N120* T140N",4
"lib2","SARS-CoV-2","TACCGAAGCAGATAAG",3,30.06,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y66W Y93G N107Q T201P",4
"lib2","SARS-CoV-2","TACCGAATGACCACCT",2,34.17,9.1,-1.73,0.06,2.93,1.04,0,">1 nonsynonymous","S36A N110Y N120P",3
"lib2","SARS-CoV-2","TACCGAATGATATTAT",21,159.12,8.47,-2.37,0.1,1.5,1.07,0,"1 nonsynonymous","I88F",1
"lib2","SARS-CoV-2","TACCGAATTTAACAGG",9,236.02,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N30E K56Y S113L R124S Q168A Q176N",6
"lib2","SARS-CoV-2","TACCGACCGACTGGCT",2,1.69,NA,NA,NA,NA,NA,NA,"stop","V32T C49* V182A",3
"lib2","SARS-CoV-2","TACCGACCGCGCTGAC",6,0.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","TACCGACGTTAGCTTG",7,41.2,9.78,-1.06,0.1,2.44,1,0,">1 nonsynonymous","S43P A89G",2
"lib2","SARS-CoV-2","TACCGACTTCGGACAC",5,65.55,6.61,-4.22,0.25,1.5,1.1,0.01,">1 nonsynonymous","R16G W23M L60H",3
"lib2","SARS-CoV-2","TACCGAGATTCATTTA",7,130.15,8.81,-2.03,0.09,1.86,1.08,0,">1 nonsynonymous","N4R L38H Y121L",3
"lib2","SARS-CoV-2","TACCGAGCGAGTCAGC",5,44.51,9.37,-1.47,0.2,1.56,1.05,0.02,">1 nonsynonymous","L5V G9Q A22G Q79T",4
"lib2","SARS-CoV-2","TACCGAGGGAAGCTCT",4,23.78,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V52L A81E V103E P149A",4
"lib2","SARS-CoV-2","TACCGAGGGGACAGCG",4,156.65,9.81,-1.03,0.07,2.31,1.05,0,">1 nonsynonymous","R27S S139I K198A",3
"lib2","SARS-CoV-2","TACCGAGTATATGACG",1,14.35,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F62H V103R S164V",3
"lib2","SARS-CoV-2","TACCGATAATCTCAAT",8,51.14,9.24,-1.6,0.19,1.5,1.04,0.02,">1 nonsynonymous","T46L W106G",2
"lib2","SARS-CoV-2","TACCGATCAGTATGCT",15,174.54,9.27,-1.57,0.03,2.93,1.09,0,"1 nonsynonymous","Y119M",1
"lib2","SARS-CoV-2","TACCGATCCCTTGCCA",6,1.64,NA,NA,NA,NA,NA,NA,"stop","D68K L131*",2
"lib2","SARS-CoV-2","TACCGATGTATAATAA",4,121.09,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","R16V Y35W F44N G86F N107A G152N",6
"lib2","SARS-CoV-2","TACCGCAACGTTTTCC",5,68.34,9.81,-1.03,0.1,2.5,1.06,0,">1 nonsynonymous","F47C L111N",2
"lib2","SARS-CoV-2","TACCGCAAGATTAACA",7,2.35,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","TACCGCACAAAACAAC",5,31.61,9.59,-1.24,0.13,2.09,1,0.01,">1 nonsynonymous","S139F P169S",2
"lib2","SARS-CoV-2","TACCGCACAAAAGCAA",1,23.17,10.82,-0.02,0.09,2.82,1.19,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TACCGCACAACCCAAG",5,35.56,8.47,-2.37,0.18,1.72,1.09,0.01,">1 nonsynonymous","Y50K K56S",2
"lib2","SARS-CoV-2","TACCGCATAACTTTTC",15,104.11,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N1D G83T F99V Y165S V173T",5
"lib2","SARS-CoV-2","TACCGCCCGCGTAGCC",11,126.45,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V115M Y165P A190N",3
"lib2","SARS-CoV-2","TACCGCGACCCATCTA",5,49.56,10.85,0.02,0.07,2.96,1.07,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TACCGCGAGACCGCTG",11,76.76,8.72,-2.11,0.09,2.21,1.13,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","TACCGCGGAAAGTGGA",5,13.52,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","K26N K48L G86S T170S",4
"lib2","SARS-CoV-2","TACCGCGGTACTTGGG",5,94.91,10.16,-0.68,0.05,2.47,1.04,0,">1 nonsynonymous","K48Y K128A Q163L",3
"lib2","SARS-CoV-2","TACCGCGTGGCTGGTG",20,171.46,10.77,-0.06,0.04,2.93,1.08,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","TACCGCTACGCGAGCT",3,36.28,9.4,-1.44,0.22,1.5,1.07,0.02,">1 nonsynonymous","N13L A81S N109K L122V",4
"lib2","SARS-CoV-2","TACCGCTCCGAGATAA",3,74.39,7.2,-3.63,0.15,1.83,1.1,0.01,">1 nonsynonymous","Y119S F126K",2
"lib2","SARS-CoV-2","TACCGCTGCAGAGAAA",7,31.9,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A33P Q84M D90S G155K R179W P191C T201Y",7
"lib2","SARS-CoV-2","TACCGGAAAACACCAA",6,28.17,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","A33P A105L E135S G152P V173R",5
"lib2","SARS-CoV-2","TACCGGAAGTATTATT",10,171.52,10.64,-0.19,0.04,2.96,1.06,0,"1 nonsynonymous","Y143H",1
"lib2","SARS-CoV-2","TACCGGAGGAACTCGC",6,174.53,10.68,-0.15,0.03,2.93,1.05,0,">1 nonsynonymous","A33Y T201I",2
"lib2","SARS-CoV-2","TACCGGATACGCCTTA",9,141.59,9.17,-1.67,0.1,1.78,1.08,0,">1 nonsynonymous","S19M I138S",2
"lib2","SARS-CoV-2","TACCGGCAAAGACAAG",7,91.56,6,-4.84,1.45,1.5,1.2,0.02,">1 nonsynonymous","S45I Q176V",2
"lib2","SARS-CoV-2","TACCGGCAGCCAGCTT",9,81.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T3M G101C G117I Y143S T148V",5
"lib2","SARS-CoV-2","TACCGGCATCCTCACA",18,216.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D112E R127W",2
"lib2","SARS-CoV-2","TACCGGCCCGACGAAT",14,125.2,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S36V C102N R136L",3
"lib2","SARS-CoV-2","TACCGGCTAAATTAAC",9,87.81,6.51,-4.33,0.28,1.5,1.11,0.01,">1 nonsynonymous","F17P V37G V77R",3
"lib2","SARS-CoV-2","TACCGGCTAGTAATAA",3,0.36,NA,NA,NA,NA,NA,NA,"stop","V71M P96D V103S V173G R179*",5
"lib2","SARS-CoV-2","TACCGGGACAATTTGG",18,139.57,6,-4.84,1.61,1.5,1.21,0.02,">1 nonsynonymous","N58P R136A Y178D",3
"lib2","SARS-CoV-2","TACCGGGTAATACGAA",5,49.49,10.24,-0.59,0.05,3,1.02,0,">1 nonsynonymous","A81G K87N",2
"lib2","SARS-CoV-2","TACCGGTAAATACAAA",7,37.89,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S41N I88G D98T A105T Y119R",5
"lib2","SARS-CoV-2","TACCGGTGTTACACTG",1,87.69,9.44,-1.4,0.09,2,1.02,0,"1 nonsynonymous","I28K",1
"lib2","SARS-CoV-2","TACCGTAAAAAATATA",1,12.4,10.72,-0.11,0.1,2.86,1.16,0.01,"1 nonsynonymous","W23F",1
"lib2","SARS-CoV-2","TACCGTAGCTCAAAAC",3,69.35,10.76,-0.07,0.05,2.96,1.06,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","TACCGTAGTCCTAGGA",9,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R K132Y F167V",3
"lib2","SARS-CoV-2","TACCGTATGAAAGCCC",3,58.84,6.07,-4.77,0.66,1.5,1.15,0.01,">1 nonsynonymous","C158W K198R",2
"lib2","SARS-CoV-2","TACCGTCAAATAAAAT",9,130.62,10.58,-0.26,0.05,2.95,1.06,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","TACCGTTAAAAGGTAG",5,58.38,9.57,-1.27,0.04,2.95,1.05,0,">1 nonsynonymous","P161T Q168A P197F",3
"lib2","SARS-CoV-2","TACCGTTAATGGCTTC",2,0.58,NA,NA,NA,NA,NA,NA,"stop","C6R E135* E141G G146L F185V",5
"lib2","SARS-CoV-2","TACCGTTAGTGTAACT",3,9.36,9.36,-1.48,0.1,3,1.06,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","TACCGTTTAAGGCGGT",2,26.73,10.89,0.05,0.08,2.95,1.04,0,"1 nonsynonymous","F160P",1
"lib2","SARS-CoV-2","TACCTAAAAAGAGAAC",1,33.17,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G86S G166P",2
"lib2","SARS-CoV-2","TACCTAAAGCCTAGCG",2,54.14,6.17,-4.67,1.4,1.5,1.3,0.06,">1 nonsynonymous","S113L V182R",2
"lib2","SARS-CoV-2","TACCTAAAGTGGACTT",10,76.32,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F12C F17D",2
"lib2","SARS-CoV-2","TACCTAAATACGACAA",5,117.5,10.37,-0.47,0.04,2.86,1.08,0,">1 nonsynonymous","N120V S129R P149I",3
"lib2","SARS-CoV-2","TACCTAACACAAGAGT",4,41.76,10.13,-0.71,0.07,2.66,1.04,0,">1 nonsynonymous","E10W V37M E186D",3
"lib2","SARS-CoV-2","TACCTAACGATAAATG",9,176.85,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C61K T100F Y159T",3
"lib2","SARS-CoV-2","TACCTAACTAGTAAAC",5,0.35,NA,NA,NA,NA,NA,NA,"stop","N40R F70S D90T L95R F126Y P133* T148L F160L",8
"lib2","SARS-CoV-2","TACCTAACTTCCGAAG",13,157.19,9.72,-1.12,0.12,1.94,1.03,0,">1 nonsynonymous","N4W E135V",2
"lib2","SARS-CoV-2","TACCTAAGTAGGCTGG",2,41.67,10.85,0.01,0.07,2.87,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TACCTAAGTGGTTTTA",6,77.61,9.9,-0.94,0.11,2.28,1.06,0,"1 nonsynonymous","K94G",1
"lib2","SARS-CoV-2","TACCTAATAAAAAATC",7,95.94,10.75,-0.08,0.05,2.86,1.18,0,"1 nonsynonymous","E141N",1
"lib2","SARS-CoV-2","TACCTAATACGAACGC",16,218.07,10.41,-0.43,0.03,2.95,1.05,0,">1 nonsynonymous","R78G K87R S139A Q168A",4
"lib2","SARS-CoV-2","TACCTAATCAGCTAAA",3,32.71,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N92L S184V",2
"lib2","SARS-CoV-2","TACCTAATCCCGACCC",11,10.61,NA,NA,NA,NA,NA,NA,"stop","T15* S41G P54S D137E T201S",5
"lib2","SARS-CoV-2","TACCTAATGATACAGA",2,5.02,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D90H Y123A Y143H V180M",4
"lib2","SARS-CoV-2","TACCTAATGCAGTAAG",1,719.02,8.36,-2.48,0.4,1.5,1,0.06,">1 nonsynonymous","P82L T170V",2
"lib2","SARS-CoV-2","TACCTACACAGGTTAT",7,87.54,8.13,-2.71,0.15,1.58,1.07,0.01,">1 nonsynonymous","D75E Y165A",2
"lib2","SARS-CoV-2","TACCTACCCGAAACTA",6,149.3,10.8,-0.04,0.04,2.9,1.08,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","TACCTACCTGCACGGG",2,7.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48N K94M T100C Q144I V153F",5
"lib2","SARS-CoV-2","TACCTACTAACGATTG",9,84.78,9.57,-1.27,0.06,1.98,1.04,0,">1 nonsynonymous","S43G L131N",2
"lib2","SARS-CoV-2","TACCTACTCTGGCGAA",3,61.04,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S19T F47C L122W P161R",4
"lib2","SARS-CoV-2","TACCTACTTTATTGAA",2,10.28,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","S41A I80M L95T E154W T201K",5
"lib2","SARS-CoV-2","TACCTACTTTTTGCTT",2,29.08,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G86V N92I L122P S139V",4
"lib2","SARS-CoV-2","TACCTAGAACAGAGAA",1,18.26,8.48,-2.35,0.16,2.05,1,0.02,">1 nonsynonymous","P7A A42L K87A D98K Y119R T140F",6
"lib2","SARS-CoV-2","TACCTAGCAGCAACCA",1,7.81,6.52,-4.32,0.89,1.5,1.11,0.02,">1 nonsynonymous","T63S P82A F134V",3
"lib2","SARS-CoV-2","TACCTAGCGTGCCCTG",16,10.05,NA,NA,NA,NA,NA,NA,"stop","T3A Y39* D68P L188T",4
"lib2","SARS-CoV-2","TACCTAGTGCGATGCC",10,3.28,NA,NA,NA,NA,NA,NA,"stop","A33R F99L W106* T201M",4
"lib2","SARS-CoV-2","TACCTAGTTACATCTA",1,14.75,6,-4.84,2,1.5,1.28,0.04,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","TACCTATAATGCGGTG",3,19.69,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","C49R Y119K G146M",3
"lib2","SARS-CoV-2","TACCTATACCCTCCCA",2,0.94,NA,NA,NA,NA,NA,NA,"stop","I28M T63R C150* Q176Y",4
"lib2","SARS-CoV-2","TACCTATATGTACATT",7,110.6,10.8,-0.03,0.06,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCTATTAACAGCGT",10,19.85,6,-4.84,2,1.5,1.1,0,"1 nonsynonymous","L183R",1
"lib2","SARS-CoV-2","TACCTATTACCAGAGT",6,9.49,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C49L S113R G152I",3
"lib2","SARS-CoV-2","TACCTATTGATTATTG",4,38.64,9.54,-1.29,0.13,1.86,1.12,0.01,">1 nonsynonymous","I104S L122D",2
"lib2","SARS-CoV-2","TACCTCAAATGAATTA",2,2.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","TACCTCAAATGATAAT",4,27.54,8.52,-2.31,0.2,1.5,1,0.02,">1 nonsynonymous","I2H A14M V77T A105Y",4
"lib2","SARS-CoV-2","TACCTCACAGACACGA",3,28.52,8.34,-2.49,0.2,1.92,1.01,0.02,">1 nonsynonymous","E10H N107K G116S",3
"lib2","SARS-CoV-2","TACCTCACCACAGAAA",11,71.48,8.09,-2.75,0.25,1.5,1.18,0.02,">1 nonsynonymous","Q84S N120M R136G",3
"lib2","SARS-CoV-2","TACCTCACCACGTGAC",1,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54G I104T R124V E135L",4
"lib2","SARS-CoV-2","TACCTCACTACTAAGC",6,28.24,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N1V T15S W106S E141Y Y159S",5
"lib2","SARS-CoV-2","TACCTCACTCCCAGGA",3,25.61,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","A81I F167Q",2
"lib2","SARS-CoV-2","TACCTCAGCAAAACAA",7,128.46,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5V G51S G86F A145S T201L",5
"lib2","SARS-CoV-2","TACCTCAGCCCCACCA",7,10.48,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P54R I104K R136P",3
"lib2","SARS-CoV-2","TACCTCAGTGAACAAT",6,41.37,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K56L D68E G83V N107T K132L",5
"lib2","SARS-CoV-2","TACCTCATATCGACAA",1,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R G51L L122H",3
"lib2","SARS-CoV-2","TACCTCATTACAAAGT",6,64.07,9.19,-1.64,0.12,2.57,1.18,0,">1 nonsynonymous","G51E G166S",2
"lib2","SARS-CoV-2","TACCTCCAGGGGAACT",1,17.57,6.92,-3.91,0.31,1.5,1.1,0.02,">1 nonsynonymous","F70L F134L",2
"lib2","SARS-CoV-2","TACCTCCCCGTCCATG",3,95.41,10.73,-0.11,0.03,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCTCCCGCCCCTAA",4,59.52,6.24,-4.59,0.67,1.5,1.16,0.02,">1 nonsynonymous","Y91I G146V",2
"lib2","SARS-CoV-2","TACCTCCCTCAAGAAA",9,100.91,10.19,-0.65,0.03,2.96,1.05,0,"1 nonsynonymous","G174E",1
"lib2","SARS-CoV-2","TACCTCCCTCTCCACG",3,33.34,8.76,-2.07,0.1,2.89,1.14,0,">1 nonsynonymous","C61N Q144M N157G",3
"lib2","SARS-CoV-2","TACCTCCGACGATATA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9L I142* V153L Q176N",4
"lib2","SARS-CoV-2","TACCTCCTAATCAAAT",4,84.22,10.88,0.04,0.05,2.94,1.07,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","TACCTCCTGCCCCTCC",9,142.76,10.73,-0.11,0.03,2.9,1.06,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","TACCTCCTTTGGGTAG",5,50,10.66,-0.18,0.06,2.94,1.04,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TACCTCGAAAAAGCTG",17,9.67,NA,NA,NA,NA,NA,NA,"stop","E10D A33Q C49* T148S K198M",5
"lib2","SARS-CoV-2","TACCTCGGGCCGTGAG",4,70.53,10.75,-0.09,0.05,2.9,1.11,0,"1 nonsynonymous","V115W",1
"lib2","SARS-CoV-2","TACCTCGTACAGATTT",12,167.35,10.3,-0.54,0.03,2.93,1.03,0,"1 nonsynonymous","Q144I",1
"lib2","SARS-CoV-2","TACCTCTAAAATCAGG",1,28.33,6,-4.84,2,3,1.07,0,">1 nonsynonymous","R25W L38A",2
"lib2","SARS-CoV-2","TACCTCTAAATGCTCA",6,83.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12N S45T K56P I142L",4
"lib2","SARS-CoV-2","TACCTCTCTCATCGCG",9,0.3,NA,NA,NA,NA,NA,NA,"stop","Y35G L57* I104F A192S",4
"lib2","SARS-CoV-2","TACCTCTCTGTATGGA",2,21.37,10.8,-0.04,0.07,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TACCTCTGCACGATCG",2,99.01,10.87,0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCTCTTCAAATGCA",1,30.76,10.78,-0.05,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TACCTCTTTTCGATAG",7,141.32,10.74,-0.1,0.05,2.95,1.06,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","TACCTGAACGAACTCC",2,14.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96M E141P",2
"lib2","SARS-CoV-2","TACCTGAAGCTGTCCA",4,67.21,6.29,-4.55,1.07,1.5,1.24,0.06,">1 nonsynonymous","L57F G83Y G146L",3
"lib2","SARS-CoV-2","TACCTGAATAATAAAA",7,3.05,NA,NA,NA,NA,NA,NA,"stop","F44S K128S N157*",3
"lib2","SARS-CoV-2","TACCTGAATATCCACA",2,9.51,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A42R A89S S108M P161F",4
"lib2","SARS-CoV-2","TACCTGACTTGAGAGG",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19Y K56N N64D W106L N118Y P149M",6
"lib2","SARS-CoV-2","TACCTGAGAAAGTTAG",5,39.55,9.07,-1.76,0.11,1.84,1.06,0.01,"1 nonsynonymous","V77S",1
"lib2","SARS-CoV-2","TACCTGATCGAATAAT",8,81.46,10.27,-0.57,0.05,2.69,1.05,0,">1 nonsynonymous","N4F N151A Q163I",3
"lib2","SARS-CoV-2","TACCTGATGAGACATG",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104S L122D",2
"lib2","SARS-CoV-2","TACCTGCAACCCAAGT",2,22.97,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","T3F V11R Y93V W106G",4
"lib2","SARS-CoV-2","TACCTGCGATGTCATG",3,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9Y C49N",2
"lib2","SARS-CoV-2","TACCTGGACCACGATT",2,50.35,10.05,-0.78,0.12,2.43,1.02,0,">1 nonsynonymous","Y66D Q84K D98S",3
"lib2","SARS-CoV-2","TACCTGGACCCAATCC",8,1.27,NA,NA,NA,NA,NA,NA,"stop","V65* A89S L122P",3
"lib2","SARS-CoV-2","TACCTGGCTATTGTAG",5,103.69,10.52,-0.31,0.05,2.86,1.11,0,"1 nonsynonymous","N58L",1
"lib2","SARS-CoV-2","TACCTGTGATAAAAAA",1,34.42,10.26,-0.58,0.04,2.88,1.01,0,">1 nonsynonymous","A81T T148H",2
"lib2","SARS-CoV-2","TACCTGTTAATTCCCG",3,3.88,NA,NA,NA,NA,NA,NA,"stop","F44L S139G E154*",3
"lib2","SARS-CoV-2","TACCTGTTCAAAAGTG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","D68T P149T G166* Q176T",4
"lib2","SARS-CoV-2","TACCTGTTCGCACATA",1,0,NA,NA,NA,NA,NA,NA,"stop","D59E L122* E141N",3
"lib2","SARS-CoV-2","TACCTTAAGGTTTCAC",4,27.57,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6L G83S S139P",3
"lib2","SARS-CoV-2","TACCTTACACCCGAGG",9,134.07,10.99,0.15,0.08,2.87,1.12,0,">1 nonsynonymous","K48N N171M",2
"lib2","SARS-CoV-2","TACCTTAGGCAGGTAA",1,17.28,8.2,-2.63,0.15,1.75,1.07,0.01,">1 nonsynonymous","V103L Y119H",2
"lib2","SARS-CoV-2","TACCTTAGTATATGAA",2,6.53,8.17,-2.67,0.22,2.13,1.12,0.01,">1 nonsynonymous","F44L Y121N F156S",3
"lib2","SARS-CoV-2","TACCTTATATGGTTTG",12,200.26,10.24,-0.6,0.04,2.84,1.03,0,">1 nonsynonymous","N4K L60P T100L",3
"lib2","SARS-CoV-2","TACCTTATGCAGGGCT",11,110.25,10.9,0.07,0.05,2.92,1.09,0,"1 nonsynonymous","P54R",1
"lib2","SARS-CoV-2","TACCTTATGGGCACAG",10,59.39,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","I2P E10F Y35N S41N Q144Y F167T Q176M A190I",8
"lib2","SARS-CoV-2","TACCTTCAATATACAC",1,0.53,NA,NA,NA,NA,NA,NA,"stop","N30E D90G F99*",3
"lib2","SARS-CoV-2","TACCTTCATGTGATGT",1,9.84,10.74,-0.1,0.06,3,1,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","TACCTTCCTGTGGAGT",1,0.78,NA,NA,NA,NA,NA,NA,"stop","F12K A42V E141P E154*",4
"lib2","SARS-CoV-2","TACCTTCTATCCCAGG",5,84.68,9.65,-1.19,0.04,2.92,1.07,0,">1 nonsynonymous","L5E L111F Y119F",3
"lib2","SARS-CoV-2","TACCTTGGGGACCTAA",3,78.52,10.86,0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TACCTTGTACACTTTA",3,22.71,6,-4.84,0.78,3,1.08,0,">1 nonsynonymous","C6R S45I Y121L",3
"lib2","SARS-CoV-2","TACCTTTAAACGAGCA",10,68.65,8.08,-2.75,0.12,2.21,1.08,0,">1 nonsynonymous","G9A N157V",2
"lib2","SARS-CoV-2","TACCTTTATCTTAGTG",5,10.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183A",1
"lib2","SARS-CoV-2","TACCTTTCAATGTTCC",5,30.98,6,-4.84,1.32,3,1.19,0.01,">1 nonsynonymous","G86C Y91N",2
"lib2","SARS-CoV-2","TACCTTTGCTGAACTG",4,112.04,10.22,-0.62,0.05,2.79,1,0,">1 nonsynonymous","N1M C61S Y178M",3
"lib2","SARS-CoV-2","TACCTTTGCTGTACCT",4,0,NA,NA,NA,NA,NA,NA,"stop","T55Y V194* T201*",3
"lib2","SARS-CoV-2","TACCTTTTAAGCAATC",3,17.03,9.91,-0.93,0.19,2.75,1,0.01,">1 nonsynonymous","S45C S184Y",2
"lib2","SARS-CoV-2","TACCTTTTAATCGAAA",5,102.23,10.12,-0.72,0.04,2.84,1.01,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","TACCTTTTATAAAAGT",8,2.49,NA,NA,NA,NA,NA,NA,"stop","S36T T63L V103* N109Y G172I",5
"lib2","SARS-CoV-2","TACGAAAAAAAGGAAT",1,6.58,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","TACGAAAAAGTAAAGA",7,82.66,10.83,0,0.06,2.85,1.06,0,">1 nonsynonymous","T3P G9H R16Q",3
"lib2","SARS-CoV-2","TACGAAAAAGTTACGA",6,56.77,6,-4.84,2,3,1.17,0,"1 nonsynonymous","N92I",1
"lib2","SARS-CoV-2","TACGAAAAATGTGGAA",1,13.21,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","P7V V20S C49L G155M G166C",5
"lib2","SARS-CoV-2","TACGAAAACCGTGCTG",7,231.73,9.75,-1.08,0.04,2.77,1.02,0,">1 nonsynonymous","C6E Y123S N130I",3
"lib2","SARS-CoV-2","TACGAAAAGGTAAATG",2,60.03,10.82,-0.02,0.05,2.84,1.18,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","TACGAAAATATTCAGT",4,62.67,9.72,-1.12,0.07,2.87,1.17,0,">1 nonsynonymous","N1E P169D",2
"lib2","SARS-CoV-2","TACGAAACAAGCCAGG",2,93.03,9.26,-1.58,0.03,2.89,1.1,0,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","TACGAAACACGCCGGA",8,111.51,10.62,-0.22,0.05,2.93,1.05,0,"1 nonsynonymous","E10T",1
"lib2","SARS-CoV-2","TACGAAATAAGGCCGT",6,156.67,10.73,-0.1,0.03,2.99,1.03,0,"1 nonsynonymous","V115M",1
"lib2","SARS-CoV-2","TACGAAATAATACACT",1,0.68,NA,NA,NA,NA,NA,NA,"stop","F17N Y119L F126* D137R Q176M",5
"lib2","SARS-CoV-2","TACGAAATACGTAGCA",4,112.51,8.77,-2.06,0.07,2.9,1.12,0,">1 nonsynonymous","S113V K198M",2
"lib2","SARS-CoV-2","TACGAAATCGTATAAT",10,4.1,NA,NA,NA,NA,NA,NA,"stop","Y91S E141G F167* T201S",4
"lib2","SARS-CoV-2","TACGAAATGGAAGTAT",10,53.93,9.95,-0.88,0.09,2.44,1.07,0,">1 nonsynonymous","D34L D90C L122Q",3
"lib2","SARS-CoV-2","TACGAACAATCCCACG",6,57.38,6,-4.84,1.69,1.5,1.2,0.04,">1 nonsynonymous","S19K L57T F160R",3
"lib2","SARS-CoV-2","TACGAACACTAACACC",13,111.65,6.07,-4.76,0.85,1.5,1.25,0.02,">1 nonsynonymous","S36A T46R S113Y G155I K198R",5
"lib2","SARS-CoV-2","TACGAACAGAGTATAA",2,37.54,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V20W F44A",2
"lib2","SARS-CoV-2","TACGAACAGCTACCAC",4,71.52,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","W23M G146E P177V",3
"lib2","SARS-CoV-2","TACGAACATCTGACCG",6,138.12,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R27S S113Q F160Y G174V",4
"lib2","SARS-CoV-2","TACGAACATGAGGTCA",11,2.69,NA,NA,NA,NA,NA,NA,"stop","F62* T201F",2
"lib2","SARS-CoV-2","TACGAACATTTTAGTG",2,11.48,6,-4.84,2,3,1.11,0.06,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","TACGAACCCGATGCTA",1,28.32,10.46,-0.37,0.19,2.65,1.17,0.01,"1 nonsynonymous","Q144M",1
"lib2","SARS-CoV-2","TACGAACCGACAAGAG",6,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F G101S",2
"lib2","SARS-CoV-2","TACGAACGCCTAATAA",10,104.59,10.66,-0.17,0.05,2.91,1.08,0,">1 nonsynonymous","T46K T148K",2
"lib2","SARS-CoV-2","TACGAACTCATAAGGA",3,12.88,9.89,-0.94,0.14,2.65,1.02,0,">1 nonsynonymous","G9F R16D T85L K128G K198A",5
"lib2","SARS-CoV-2","TACGAACTGAAACGCG",5,17.59,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A67P N120L",2
"lib2","SARS-CoV-2","TACGAACTGTTGGGAC",4,0.75,NA,NA,NA,NA,NA,NA,"stop","T3L V11R A33N G116* R127H",5
"lib2","SARS-CoV-2","TACGAAGAAAGATGTA",12,80.92,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F47L D75K I88N",3
"lib2","SARS-CoV-2","TACGAAGAATATTGAC",4,26.18,6.24,-4.6,0.66,1.5,1.2,0.02,">1 nonsynonymous","T3V D137G",2
"lib2","SARS-CoV-2","TACGAAGATTAGTTAA",4,74.69,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G9Q Y35I S53L K128Y I142M C150K Y165K K199I",8
"lib2","SARS-CoV-2","TACGAAGCAGCATATT",3,10.01,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","F12L V32P K56W C61F S129M P169S",6
"lib2","SARS-CoV-2","TACGAAGCGTTGTTTG",14,165.2,10.64,-0.19,0.03,2.96,1.02,0,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","TACGAAGGAAACTAAG",1,202.4,10.17,-0.67,0.02,2.92,1.03,0,">1 nonsynonymous","G9L G155S",2
"lib2","SARS-CoV-2","TACGAAGGAAGTATAT",7,93.84,10.2,-0.63,0.04,2.77,1.03,0,">1 nonsynonymous","T3V R27V D59F D98H",4
"lib2","SARS-CoV-2","TACGAAGGCATACTGG",8,90.85,9.95,-0.88,0.07,2.51,1.04,0,">1 nonsynonymous","A22G L60A A105S",3
"lib2","SARS-CoV-2","TACGAAGGTATGTCGA",1,22.82,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23R L162F",2
"lib2","SARS-CoV-2","TACGAAGGTGATATTC",12,52,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N64A A89M K94E C102A",4
"lib2","SARS-CoV-2","TACGAAGTCTTAGAAT",8,1.99,NA,NA,NA,NA,NA,NA,"stop","T85M I104F E141W L162I K198*",5
"lib2","SARS-CoV-2","TACGAATATAATCTCT",7,121.85,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N120I F167S",2
"lib2","SARS-CoV-2","TACGAATATACCTGAG",9,7.43,NA,NA,NA,NA,NA,NA,"stop","S43I I88* D112T",3
"lib2","SARS-CoV-2","TACGAATATTACCCGT",1,49.77,10.81,-0.02,0.06,2.91,1.1,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","TACGAATCCACATATG",13,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L T55F",2
"lib2","SARS-CoV-2","TACGAATCCAGACATT",3,68.11,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V11L L60I V77E",3
"lib2","SARS-CoV-2","TACGAATCTGTCTAAA",2,58.93,10.6,-0.23,0.11,2.8,1.12,0,">1 nonsynonymous","E10D K199I",2
"lib2","SARS-CoV-2","TACGAATGGAAAGACC",15,244.91,10.84,0,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGAATGGAAAGTCA",8,132.13,8.23,-2.61,0.1,1.84,1.1,0,">1 nonsynonymous","A22I F44N T85N",3
"lib2","SARS-CoV-2","TACGAATTCGGGTAAG",14,123.28,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P96L G101F",2
"lib2","SARS-CoV-2","TACGAATTCTAATCGC",1,13.67,7.49,-3.35,0.17,1.88,1.08,0.01,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","TACGAATTTAGACAAC",2,16.12,6.11,-4.72,0.4,3,1.21,0.01,">1 nonsynonymous","T85S D97V N107K I142W F156K",5
"lib2","SARS-CoV-2","TACGACAAAGTCAGAA",1,10.84,10.95,0.11,0.06,3,1.01,0,"1 nonsynonymous","P149A",1
"lib2","SARS-CoV-2","TACGACAATGGATCCT",17,294.25,6.67,-4.17,0.16,1.5,1.12,0,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","TACGACACTGGCACCG",2,8.59,10.63,-0.21,0.13,2.7,1.35,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TACGACAGTCGTTGCA",4,20.67,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","P96F V173A",2
"lib2","SARS-CoV-2","TACGACATAAAAACAT",3,40.82,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K48R L57P G117P I138S K199F",5
"lib2","SARS-CoV-2","TACGACATCTTGTTTT",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83S W106M",2
"lib2","SARS-CoV-2","TACGACATGCGAAGCT",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M C49Y F62Y T140A S200L",5
"lib2","SARS-CoV-2","TACGACATGGACATTT",4,85.77,10.63,-0.2,0.06,2.81,1.15,0,">1 nonsynonymous","S53H T63S",2
"lib2","SARS-CoV-2","TACGACATTGTTCTAA",1,18.61,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","S19F G51S T63R D90S Y119I T140V T201M",7
"lib2","SARS-CoV-2","TACGACCAACGCTTTC",6,41.41,10.32,-0.51,0.05,2.91,1.07,0,">1 nonsynonymous","N4S D34C",2
"lib2","SARS-CoV-2","TACGACCCCACCCGTA",11,128.8,10.54,-0.29,0.05,2.96,1.03,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","TACGACCCGGTTCCGC",7,40.21,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41G D90S E135R F167T",4
"lib2","SARS-CoV-2","TACGACCGATGCGAAC",10,72.73,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Y121K C150R F167R",3
"lib2","SARS-CoV-2","TACGACCTACTTAATG",9,216.18,6.67,-4.16,0.26,1.5,1.1,0.01,">1 nonsynonymous","A145I Y175R",2
"lib2","SARS-CoV-2","TACGACCTGCGTCAAG",4,72.94,9.59,-1.25,0.11,1.68,1.07,0.01,">1 nonsynonymous","A22Y S53F F134L",3
"lib2","SARS-CoV-2","TACGACCTGCTTTAAT",2,13.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I28K P82K",2
"lib2","SARS-CoV-2","TACGACCTGTCCCAAC",1,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M V103L",2
"lib2","SARS-CoV-2","TACGACGATATGCATA",3,35.8,10.24,-0.6,0.1,2.78,1.04,0,">1 nonsynonymous","A14C T85V",2
"lib2","SARS-CoV-2","TACGACGCCTTCCCAA",10,6.71,6,-4.84,2,3,1.34,0.04,">1 nonsynonymous","S36A T63Y K114M P161C E186I",5
"lib2","SARS-CoV-2","TACGACGTGGACGTAA",5,66.55,9.97,-0.87,0.1,2.46,1,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TACGACGTTTATTGTA",5,0.99,NA,NA,NA,NA,NA,NA,"stop","T3F A22T S41*",3
"lib2","SARS-CoV-2","TACGACTCACATGGAC",5,54.62,10.75,-0.09,0.05,2.94,1.09,0,"1 nonsynonymous","T15A",1
"lib2","SARS-CoV-2","TACGACTGGCCCTAAT",2,59.04,10.89,0.06,0.04,2.89,1.11,0,"1 nonsynonymous","L187R",1
"lib2","SARS-CoV-2","TACGAGAACACGTTCT",7,95.06,10.97,0.14,0.07,2.8,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGAGAGATTAAAAG",8,78.54,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G9T S19K D112M",3
"lib2","SARS-CoV-2","TACGAGAGCAACTTGC",3,24.56,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F12E T55G D68I R136N F160P Q168R",6
"lib2","SARS-CoV-2","TACGAGAGCATGCATC",4,7.69,8.05,-2.79,0.49,1.5,1,0.05,">1 nonsynonymous","D59A I88L Y119R Q168M",4
"lib2","SARS-CoV-2","TACGAGAGCTGATGCT",11,80.12,10.81,-0.03,0.04,2.98,1.03,0,"1 nonsynonymous","P191R",1
"lib2","SARS-CoV-2","TACGAGAGGACCACCG",1,1.14,NA,NA,NA,NA,NA,NA,"stop","N40* S45R",2
"lib2","SARS-CoV-2","TACGAGCAAACTGACA",2,23.9,8.76,-2.07,0.15,1.73,1.14,0.02,">1 nonsynonymous","N4A Y91G K114A L188W",4
"lib2","SARS-CoV-2","TACGAGCAAATTAAGT",2,24.7,10.8,-0.04,0.06,2.92,1.11,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","TACGAGCAATACCATG",1,34.9,8.1,-2.74,0.09,2.22,1.04,0,">1 nonsynonymous","Y35P T55V Y175Q",3
"lib2","SARS-CoV-2","TACGAGCACGATCACC",2,22.36,9.83,-1.01,0.08,2.7,1,0,">1 nonsynonymous","N64H F99L N171S",3
"lib2","SARS-CoV-2","TACGAGCCCTCTTAAC",5,15.42,9.35,-1.48,0.26,1.91,1.11,0.02,">1 nonsynonymous","A14R V52R",2
"lib2","SARS-CoV-2","TACGAGGAACCCAACC",2,40.76,10.39,-0.45,0.07,2.95,1.05,0,">1 nonsynonymous","D90Y S200W",2
"lib2","SARS-CoV-2","TACGAGGGATAAAAGT",5,96.74,10.75,-0.09,0.02,2.97,1.04,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","TACGAGGTTAAAGGAC",1,33.32,9.98,-0.86,0.1,2.68,1.1,0.01,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","TACGAGTAAGTATACC",5,84.93,10.44,-0.4,0.07,2.84,1.1,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","TACGAGTCAATGCGAA",3,72.58,10.86,0.02,0.07,2.92,1.09,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","TACGAGTCGCCAATGG",1,13.03,10.04,-0.8,0.12,2.02,1.13,0.01,">1 nonsynonymous","N13M G83L",2
"lib2","SARS-CoV-2","TACGAGTTAAGAAGAA",2,7.56,8.81,-2.03,0.23,2.47,1.01,0.01,">1 nonsynonymous","S69R T85L G174E P197A",4
"lib2","SARS-CoV-2","TACGAGTTACAGGACA",7,97.67,10.83,0,0.05,3,1.03,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","TACGATAAAAAAATCG",5,170.51,8.58,-2.26,0.29,1.5,1,0.04,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","TACGATAAAAACTAGT",10,14.91,7.76,-3.07,0.42,1.9,1.25,0.04,">1 nonsynonymous","S41Y N92D V153H",3
"lib2","SARS-CoV-2","TACGATAAAAGGAATT",11,3.22,NA,NA,NA,NA,NA,NA,"stop","S29D P54L G86* Y121K Y143K Y159L",6
"lib2","SARS-CoV-2","TACGATAAACCATGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T T15D V32K S129A G152C",5
"lib2","SARS-CoV-2","TACGATAACCAGAAAC",16,243.88,10.42,-0.42,0.03,2.93,1.04,0,">1 nonsynonymous","R27K F44K P54S I138L",4
"lib2","SARS-CoV-2","TACGATAAGAGTATCT",1,8.48,6.61,-4.22,0.51,3,1.1,0.01,">1 nonsynonymous","K48L Y119L K132V Y143V F167H",5
"lib2","SARS-CoV-2","TACGATAATCACCGAA",4,74.12,6.53,-4.31,0.6,1.5,1.28,0.04,">1 nonsynonymous","D34A K94S",2
"lib2","SARS-CoV-2","TACGATACACGTGCGA",2,49.01,8.5,-2.34,0.15,2.15,1.12,0.01,">1 nonsynonymous","G83D F156S Y178T",3
"lib2","SARS-CoV-2","TACGATACAGAAATTT",8,2.99,NA,NA,NA,NA,NA,NA,"stop","N4K A33M V173* P197T",4
"lib2","SARS-CoV-2","TACGATACGCTTTGAT",10,75.92,8.94,-1.89,0.17,1.61,1.18,0.01,">1 nonsynonymous","D90S A105F",2
"lib2","SARS-CoV-2","TACGATACGGTTCGTC",11,119.85,10.85,0.02,0.07,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGATACTGGTCTAA",3,50.01,10.7,-0.14,0.06,2.97,1.04,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","TACGATAGTGGTGGAA",1,21.61,10.66,-0.18,0.05,3,1.03,0,">1 nonsynonymous","D59E Q144D",2
"lib2","SARS-CoV-2","TACGATATCATTAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","G51P N64* D97I N151F Q168I",5
"lib2","SARS-CoV-2","TACGATCAAAATCCAG",5,66.56,6.57,-4.26,0.45,1.5,1.16,0.03,">1 nonsynonymous","F44S N58R Y121T",3
"lib2","SARS-CoV-2","TACGATCACACAGGCC",4,38.29,10.95,0.12,0.07,2.97,1.03,0,"1 nonsynonymous","A18S",1
"lib2","SARS-CoV-2","TACGATCACTCTTCCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34M T46R V173Y",3
"lib2","SARS-CoV-2","TACGATCATACATACA",2,0.5,NA,NA,NA,NA,NA,NA,"stop","R127* P133A S184F",3
"lib2","SARS-CoV-2","TACGATCCATGCCTAT",11,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T T55G A89P T100H G117V G172S R179Y",7
"lib2","SARS-CoV-2","TACGATCCTAATTTAC",1,6.12,10.48,-0.36,0.09,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGATCCTTTTTCGT",11,147.72,10.94,0.11,0.05,2.92,1.08,0,"1 nonsynonymous","P197Q",1
"lib2","SARS-CoV-2","TACGATGCAGAATATG",10,112.84,9.93,-0.9,0.06,2.75,1.08,0,">1 nonsynonymous","S45C Y121F",2
"lib2","SARS-CoV-2","TACGATGCGGGCAATT",7,127.12,9.24,-1.6,0.04,2.87,1.08,0,">1 nonsynonymous","L95V F156C",2
"lib2","SARS-CoV-2","TACGATGTTTAGATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N24L S43A I104* R136S",4
"lib2","SARS-CoV-2","TACGATGTTTCGACCG",2,39.36,9.95,-0.88,0.08,2.67,1.1,0,"1 nonsynonymous","I88L",1
"lib2","SARS-CoV-2","TACGATGTTTCTATTA",2,13.04,10.52,-0.32,0.08,2.89,1.07,0,"1 nonsynonymous","N13S",1
"lib2","SARS-CoV-2","TACGATGTTTTCCATA",2,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S L60T G146K G152L",4
"lib2","SARS-CoV-2","TACGATTAATAGTTAA",1,1.26,NA,NA,NA,NA,NA,NA,"stop","L57* Q79L D90L D98H Y143C Y165E",6
"lib2","SARS-CoV-2","TACGATTCACAATGAA",1,10.02,7.46,-3.38,0.23,1.76,1.16,0.02,">1 nonsynonymous","W106L L162M",2
"lib2","SARS-CoV-2","TACGATTCACAGGGGA",3,0,NA,NA,NA,NA,NA,NA,"stop","D98T R136*",2
"lib2","SARS-CoV-2","TACGATTGGTGCTTTA",3,29.27,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R16F R78H G172Q",3
"lib2","SARS-CoV-2","TACGCAAACCGCTCGT",6,0.76,NA,NA,NA,NA,NA,NA,"stop","E10A G74T G86K F99I S113* T193Q",6
"lib2","SARS-CoV-2","TACGCAAACGGAAAAG",3,0.06,NA,NA,NA,NA,NA,NA,"stop","G9V Y35* S41N N120L L162Q",5
"lib2","SARS-CoV-2","TACGCAACAAGGCAAG",2,33.85,9.95,-0.89,0.08,2.13,1.05,0,">1 nonsynonymous","F8G Y123K",2
"lib2","SARS-CoV-2","TACGCAACCGTTACAC",2,8.87,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","I2A K56W D90V N107L",4
"lib2","SARS-CoV-2","TACGCAAGACATAGGT",3,22.78,6.03,-4.81,1.6,1.5,1.18,0.05,">1 nonsynonymous","D68R K128S R179Q",3
"lib2","SARS-CoV-2","TACGCAAGGCAGTAAC",2,111.05,10.89,0.05,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGCAAGTGGCATGT",8,117.51,8.92,-1.92,0.06,2.94,1.08,0,"1 nonsynonymous","N157H",1
"lib2","SARS-CoV-2","TACGCAATAAAAGTAT",3,2.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","TACGCAATAACAAGGT",6,0,NA,NA,NA,NA,NA,NA,"stop","S43P T55E Y119* Q144F",4
"lib2","SARS-CoV-2","TACGCACAAAGAATAA",5,56.56,10.56,-0.28,0.07,2.91,1.06,0,">1 nonsynonymous","A42Y C61E T100S T201S",4
"lib2","SARS-CoV-2","TACGCACACAACACAA",16,145.98,8.5,-2.34,0.1,2.89,1.06,0,"1 nonsynonymous","N157F",1
"lib2","SARS-CoV-2","TACGCACCCCTAATTA",2,12.34,6.54,-4.29,0.62,1.5,1.02,0.04,">1 nonsynonymous","A14F S41A F47N E154S V181C",5
"lib2","SARS-CoV-2","TACGCACCGACCTCCT",8,52.48,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51R P82M A105S P149L V153N",5
"lib2","SARS-CoV-2","TACGCACCGATTTACC",2,14,10.07,-0.77,0.07,2.77,1.25,0,">1 nonsynonymous","C6M T63S P197S",3
"lib2","SARS-CoV-2","TACGCACTCGCCATTG",2,103.55,9.45,-1.39,0.08,2.45,1.11,0,">1 nonsynonymous","P96A P169I",2
"lib2","SARS-CoV-2","TACGCACTCTTCCTAA",1,52.31,10.55,-0.29,0.04,2.95,1.06,0,">1 nonsynonymous","K48D F62S",2
"lib2","SARS-CoV-2","TACGCACTTGCGGTCT",8,47.02,10.71,-0.12,0.05,2.93,1.1,0,"1 nonsynonymous","A33P",1
"lib2","SARS-CoV-2","TACGCAGACCAGAGTG",28,14.73,NA,NA,NA,NA,NA,NA,"stop","E10L I28* V103S",3
"lib2","SARS-CoV-2","TACGCAGCTGAGCCTA",3,53.29,10.05,-0.79,0.09,2.54,1.01,0,">1 nonsynonymous","A33S R136I",2
"lib2","SARS-CoV-2","TACGCATACACTAAGG",2,11.56,10.8,-0.04,0.11,2.85,1.17,0,"1 nonsynonymous","N151K",1
"lib2","SARS-CoV-2","TACGCATCGATAGACG",2,27.28,10.05,-0.78,0.09,2.39,1.02,0,">1 nonsynonymous","N64S V71A",2
"lib2","SARS-CoV-2","TACGCATGATCGGCCA",2,52.87,10.75,-0.09,0.06,2.97,1.03,0,">1 nonsynonymous","T3I N24D",2
"lib2","SARS-CoV-2","TACGCATGTTGACGAA",5,103.33,9.48,-1.36,0.09,2.16,1.06,0,">1 nonsynonymous","C6D Y39S S139G P149L",4
"lib2","SARS-CoV-2","TACGCCAAAAAAGAAA",4,1.08,NA,NA,NA,NA,NA,NA,"stop","A33* A42P D90L",3
"lib2","SARS-CoV-2","TACGCCAAAAAATGTA",4,48.99,6.66,-4.17,0.27,1.65,1.16,0.01,">1 nonsynonymous","L122T C150F",2
"lib2","SARS-CoV-2","TACGCCAAACTAAAAA",10,1.76,NA,NA,NA,NA,NA,NA,"stop","Y121* R127A I142S",3
"lib2","SARS-CoV-2","TACGCCAACTACTGAA",6,9.09,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T3L A14S C49G W106I P149R",5
"lib2","SARS-CoV-2","TACGCCACGACCATGT",1,14.4,10.82,-0.02,0.07,3,1.03,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","TACGCCAGTCCGCAAG",8,54.07,9.3,-1.53,0.21,1.5,1,0.02,">1 nonsynonymous","S43R Y50D",2
"lib2","SARS-CoV-2","TACGCCATTATATATG",3,53.73,8.69,-2.15,0.16,1.62,1.11,0.01,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","TACGCCCAATACACAG",2,54.15,10.89,0.05,0.03,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGCCCCAAAAAACC",3,8.35,6,-4.84,2,1.5,1.12,0.03,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","TACGCCCCACCCTAAG",4,76.29,9.33,-1.51,0.04,2.84,1.07,0,">1 nonsynonymous","N58T T100Y T170F",3
"lib2","SARS-CoV-2","TACGCCCGATTATACT",3,25.66,10.54,-0.29,0.07,2.85,1.02,0,">1 nonsynonymous","E76A K198R",2
"lib2","SARS-CoV-2","TACGCCGACACTTTAC",17,2.1,NA,NA,NA,NA,NA,NA,"stop","S19T L57* G83R I88V P161N",5
"lib2","SARS-CoV-2","TACGCCGGACGCTACG",4,29.84,10.18,-0.65,0.06,2.98,1.04,0,">1 nonsynonymous","C61K V77M S113A",3
"lib2","SARS-CoV-2","TACGCCTAAAGATACT",4,15.97,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","G86E V103S Y123W",3
"lib2","SARS-CoV-2","TACGCCTACAGAGACC",5,118.97,9.88,-0.96,0.08,2.28,1.05,0,">1 nonsynonymous","P7S Y91L N171H F185L",4
"lib2","SARS-CoV-2","TACGCCTATGAAAAAC",3,1.69,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","TACGCCTCAAGCAGTA",13,127.58,8.6,-2.23,0.15,1.5,1.08,0.01,">1 nonsynonymous","K56Y G86N",2
"lib2","SARS-CoV-2","TACGCCTCCGCAACCC",4,50.47,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","G86F C158W",2
"lib2","SARS-CoV-2","TACGCCTTGCCCAAAA",5,72.85,10.2,-0.64,0.03,2.99,1.02,0,">1 nonsynonymous","P54W K87G",2
"lib2","SARS-CoV-2","TACGCGAAAAACCGAA",3,37.28,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A89T R124C S139G T201C",4
"lib2","SARS-CoV-2","TACGCGAAACCAACTA",2,123.56,10.86,0.03,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TACGCGACCCATTAAG",6,83.65,10.78,-0.06,0.06,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGCGACCGTAGCTT",9,62.28,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","D98P P161H",2
"lib2","SARS-CoV-2","TACGCGACGCTTCAAG",4,62.87,9.93,-0.91,0.05,2.87,1.1,0,">1 nonsynonymous","F156T A190V",2
"lib2","SARS-CoV-2","TACGCGAGTTCGTCTT",4,16.31,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C49R Y119V E186Y",3
"lib2","SARS-CoV-2","TACGCGATAGCCTCTA",6,1.97,NA,NA,NA,NA,NA,NA,"stop","L5T A33T A42P I72L Y123* K199S",6
"lib2","SARS-CoV-2","TACGCGATTAGATAAA",5,36.11,10.84,0,0.04,3,1,0,">1 nonsynonymous","L5N P54M",2
"lib2","SARS-CoV-2","TACGCGCAAGTACGAA",11,110.97,6.05,-4.79,1.09,1.5,1.16,0.03,">1 nonsynonymous","V37K E135I G146N Q168M",4
"lib2","SARS-CoV-2","TACGCGCCACTGATAT",5,69.41,8.56,-2.28,0.12,3,1.08,0.01,">1 nonsynonymous","K87N G146E",2
"lib2","SARS-CoV-2","TACGCGGATAAAATGT",6,42.82,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","T55A D97M D137T Y143G",4
"lib2","SARS-CoV-2","TACGCGTGCTCCAGCA",5,62.9,10.82,-0.02,0.06,2.87,1.04,0,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","TACGCTAAAACTGTAA",2,20.48,8.15,-2.69,0.15,2.37,1.02,0.01,">1 nonsynonymous","G83Q N109Y G174W",3
"lib2","SARS-CoV-2","TACGCTAAGACCCGGT",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23F G83H F134I",3
"lib2","SARS-CoV-2","TACGCTAGCTAACAGA",8,83.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P82C S113V",2
"lib2","SARS-CoV-2","TACGCTAGTATAGTTG",4,39.91,8.61,-2.22,0.11,1.81,1.09,0.01,">1 nonsynonymous","R73M C102V",2
"lib2","SARS-CoV-2","TACGCTATTTAATTTA",13,163.17,7.88,-2.95,0.14,2.4,1.07,0.01,">1 nonsynonymous","C158S T201R",2
"lib2","SARS-CoV-2","TACGCTCATGAACCTC",5,131.74,8.8,-2.04,0.05,2.96,1.06,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","TACGCTCGACCGGACG",8,54.75,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2N E135A C158F",3
"lib2","SARS-CoV-2","TACGCTCTACCATACT",4,2.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y I104N",2
"lib2","SARS-CoV-2","TACGCTGAAGTATATT",3,49.25,10.15,-0.69,0.06,2.85,1.12,0,">1 nonsynonymous","C31K G146S",2
"lib2","SARS-CoV-2","TACGCTGCGAGAATAC",1,5.42,8.11,-2.72,0.1,2.06,1,0,">1 nonsynonymous","Y91H Y159L",2
"lib2","SARS-CoV-2","TACGCTGGCACCAAAT",1,2.72,NA,NA,NA,NA,NA,NA,"stop","C31R P54S Y91* G101Y F167D",5
"lib2","SARS-CoV-2","TACGCTTAAACCGAGA",2,15.33,9.23,-1.61,0.14,2.12,1.01,0.01,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","TACGCTTACAAGCGCA",2,3.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","TACGCTTACGTTTGAA",1,22.55,10.93,0.1,0.06,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TACGCTTCTTACAAAC",4,1.5,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TACGCTTGATCATAGA",12,95.11,6,-4.84,1.07,1.5,1.11,0.01,">1 nonsynonymous","G86T D97S Y121L Q168L",4
"lib2","SARS-CoV-2","TACGCTTGCACATTAA",6,8.76,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C61H I80T F156G",3
"lib2","SARS-CoV-2","TACGCTTGCTTTCCGT",4,45.11,9.03,-1.8,0.06,2.93,1.06,0,">1 nonsynonymous","K87S F156T",2
"lib2","SARS-CoV-2","TACGGAAACCAACCAA",2,34.49,10.97,0.13,0.1,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGGAAACCTCTGAA",1,30.11,10.95,0.11,0.22,2.73,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TACGGAAACTCAGTTG",2,75.87,10.18,-0.65,0.06,2.88,1.05,0,">1 nonsynonymous","T63V R136M",2
"lib2","SARS-CoV-2","TACGGAAATAAAACAA",4,39.06,8.16,-2.68,0.14,2.02,1.1,0.01,">1 nonsynonymous","T85R I142P Q168K",3
"lib2","SARS-CoV-2","TACGGAACCAACTGAT",3,35.03,10.74,-0.1,0.05,2.91,1.1,0,">1 nonsynonymous","K56R N120D",2
"lib2","SARS-CoV-2","TACGGAACCCCCCCAT",10,18.88,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N58L N64Y S113V E135S E186V",5
"lib2","SARS-CoV-2","TACGGACGTACATAAC",6,63.61,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S19L N107V",2
"lib2","SARS-CoV-2","TACGGACTGATTTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","V37E F62M V71*",3
"lib2","SARS-CoV-2","TACGGAGCACATGCCA",1,3.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R N40V S69T D97H K199W",5
"lib2","SARS-CoV-2","TACGGAGCTAACTAAG",3,1.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90P",1
"lib2","SARS-CoV-2","TACGGAGGAAGGAGTA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y91H R136L S164Y",4
"lib2","SARS-CoV-2","TACGGAGGTAGTCAAC",1,77.64,10.77,-0.06,0.07,3,1.04,0,"1 nonsynonymous","V32S",1
"lib2","SARS-CoV-2","TACGGAGTTTACTTAC",4,37.31,9.94,-0.89,0.09,2.44,1,0,">1 nonsynonymous","R25S P54M K199L",3
"lib2","SARS-CoV-2","TACGGATAATGCTTCT",4,19.33,NA,NA,NA,NA,NA,NA,"stop","D68* S129H E154I G174R",4
"lib2","SARS-CoV-2","TACGGATACATTTCTA",21,261.85,9.92,-0.92,0.05,2.39,1.02,0,">1 nonsynonymous","F8A P197A",2
"lib2","SARS-CoV-2","TACGGATACTAAACAA",19,27.61,6,-4.84,1.65,1.5,1.24,0.05,">1 nonsynonymous","N1A D97N G101E",3
"lib2","SARS-CoV-2","TACGGATATTTATGTG",2,16.08,10.24,-0.6,0.06,2.98,1,0,">1 nonsynonymous","E141Y P149S",2
"lib2","SARS-CoV-2","TACGGATCAAATAACA",2,47.91,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","W23P K87M A145D T170L",4
"lib2","SARS-CoV-2","TACGGATCATAAAACC",9,154.37,8.5,-2.34,0.15,2.68,1.02,0.01,">1 nonsynonymous","Q163K Y175V",2
"lib2","SARS-CoV-2","TACGGATTCATGACCG",7,122.78,9.02,-1.82,0.1,1.92,1.12,0,">1 nonsynonymous","A22T C31V S147R",3
"lib2","SARS-CoV-2","TACGGATTCCTGCCTT",4,164.09,9.41,-1.42,0.08,2.78,1.12,0,">1 nonsynonymous","K128A Q144C",2
"lib2","SARS-CoV-2","TACGGCAACGAGAAAC",6,21.34,9.61,-1.22,0.18,1.5,1.05,0.03,"1 nonsynonymous","A67R",1
"lib2","SARS-CoV-2","TACGGCATTAATGTCC",9,139.77,10.83,-0.01,0.04,2.85,1.07,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","TACGGCCAAAACAACA",4,185.85,10.73,-0.11,0.03,2.95,1.06,0,">1 nonsynonymous","T3L S53Q D59Q N120Q",4
"lib2","SARS-CoV-2","TACGGCGTACCGTATC",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A14G P149* L162Q",3
"lib2","SARS-CoV-2","TACGGCGTCACCCTGG",2,21.1,10.76,-0.07,0.06,2.9,1.12,0,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","TACGGCTGCAAATTCA",1,9.89,9.5,-1.34,0.23,2.58,1,0.01,">1 nonsynonymous","C49V D98N V115R",3
"lib2","SARS-CoV-2","TACGGCTTAGCTAGGA",20,356.05,10.79,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGGCTTGTCTAAGG",5,2.18,NA,NA,NA,NA,NA,NA,"stop","E10G A42G T140* N151T Q176I F185S",6
"lib2","SARS-CoV-2","TACGGGACTTTTTACC",2,27.84,10.58,-0.26,0.08,2.93,1.08,0,"1 nonsynonymous","Y39H",1
"lib2","SARS-CoV-2","TACGGGAGCTATCGCG",2,96.7,8.71,-2.12,0.22,1.5,1.04,0.02,">1 nonsynonymous","N40W Y91Q L122E",3
"lib2","SARS-CoV-2","TACGGGCTATATGAAG",3,31.08,10,-0.84,0.15,2.2,1.09,0.01,">1 nonsynonymous","W106K S147F",2
"lib2","SARS-CoV-2","TACGGGGCAAACGATT",7,6.2,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N1F C6L L60F K87R K132L R179S",6
"lib2","SARS-CoV-2","TACGGGGGGGCAAGGA",6,145.57,10.84,0,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGGGTACTAAACGG",1,39.16,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y39I C150L Y165M",3
"lib2","SARS-CoV-2","TACGGGTATGGCCCAA",7,43.08,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","T46V P96I F167C",3
"lib2","SARS-CoV-2","TACGGGTCCACATCGC",4,61.21,9.01,-1.83,0.05,2.93,1.12,0,">1 nonsynonymous","K48E G117E",2
"lib2","SARS-CoV-2","TACGGGTGATTCAAAG",18,623.34,10.82,-0.02,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGGGTTAGAACATG",2,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S I104R",2
"lib2","SARS-CoV-2","TACGGTAACTAGAGAC",8,188.79,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","E141Q C150D F160G",3
"lib2","SARS-CoV-2","TACGGTATAACTTCCG",12,47.14,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","I88G K94N A190T",3
"lib2","SARS-CoV-2","TACGGTCACACACTTC",3,149.65,10.3,-0.54,0.04,2.86,1.15,0,">1 nonsynonymous","T148F F156V P197T",3
"lib2","SARS-CoV-2","TACGGTCCCTCGATAC",3,66.69,10.78,-0.05,0.03,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TACGGTCTAAAGCTGA",7,0.19,NA,NA,NA,NA,NA,NA,"stop","R16P C61S G146*",3
"lib2","SARS-CoV-2","TACGGTCTAGTCCGTG",3,85.11,10.64,-0.2,0.04,2.97,1.05,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","TACGGTCTGGCAGTAG",3,14.49,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V11Y A18D S113M G146Y",4
"lib2","SARS-CoV-2","TACGGTGGCCCTCAGT",6,17.49,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","F8D N64G V71Y A81M D90S A105S D112H I138Q",8
"lib2","SARS-CoV-2","TACGGTGGTAAACTTA",9,1.56,NA,NA,NA,NA,NA,NA,"stop","F12V A81*",2
"lib2","SARS-CoV-2","TACGGTTATAATCTGT",6,26.81,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V77R G83L G101T L187V",4
"lib2","SARS-CoV-2","TACGGTTCAGAACCAA",1,24.36,10.78,-0.06,0.08,2.87,1.13,0,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","TACGGTTGAGACAAAC",1,9.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15S V20E Y35R H189Y",4
"lib2","SARS-CoV-2","TACGGTTTATTCAGAA",1,23.31,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","F17V F99N D112I V173H",4
"lib2","SARS-CoV-2","TACGTAAACGCGAGGA",4,73.44,10.2,-0.64,0.09,2.51,1.01,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TACGTAAATAAAGTGA",1,41.27,8.16,-2.68,0.16,1.67,1.16,0.01,">1 nonsynonymous","D90R N151T G174I",3
"lib2","SARS-CoV-2","TACGTAACCGTAATAC",9,68.32,10.82,-0.02,0.03,2.95,1.07,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","TACGTAACTCAATGCC",5,42.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V65K L95Q P133M T201M",4
"lib2","SARS-CoV-2","TACGTAACTGCCACAT",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N S139P Q144S",3
"lib2","SARS-CoV-2","TACGTAAGACGGCACG",10,102.99,10.24,-0.6,0.04,2.81,1.07,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","TACGTAAGGAACGTCA",1,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150V H189S",2
"lib2","SARS-CoV-2","TACGTAATAGACATAC",3,8.59,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","P7S N30Y A42D K87T C102F A105V R136S P149L P161T",9
"lib2","SARS-CoV-2","TACGTAATCCTTCTTC",7,18.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V103D G166L",2
"lib2","SARS-CoV-2","TACGTACATACTAGTT",10,91.97,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N30T V103G S129N N151S",4
"lib2","SARS-CoV-2","TACGTACATTTCTGCC",7,156.03,8.96,-1.88,0.09,2.74,1.16,0,">1 nonsynonymous","D98Y N120T",2
"lib2","SARS-CoV-2","TACGTACCCAGTTGCG",11,10.4,8.37,-2.47,0.29,2.49,1.32,0.03,">1 nonsynonymous","T55N Y91K G166D",3
"lib2","SARS-CoV-2","TACGTACCGATTTCAT",10,66.75,9.83,-1,0.06,2.02,1,0,">1 nonsynonymous","L57C E141L",2
"lib2","SARS-CoV-2","TACGTACCGGGTCCAA",6,25.54,6.26,-4.57,0.98,1.5,1.19,0.04,">1 nonsynonymous","T3V C49Q P54R G155S",4
"lib2","SARS-CoV-2","TACGTACGTCCCTGAC",3,44.6,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","Y66P P96F Y175N T201Y",4
"lib2","SARS-CoV-2","TACGTAGAGCATTTTC",1,58.44,10.52,-0.31,0.05,2.91,1.11,0,">1 nonsynonymous","G155S K199D",2
"lib2","SARS-CoV-2","TACGTAGGTCTAACTC",20,342.68,10.78,-0.06,0.04,2.89,1.11,0,">1 nonsynonymous","S41N F62Y P149Q",3
"lib2","SARS-CoV-2","TACGTAGTATGTTGGT",10,108.57,7.11,-3.73,0.26,1.5,1.17,0.02,">1 nonsynonymous","V77L R127L G155K",3
"lib2","SARS-CoV-2","TACGTATAAACCGAAA",2,17.39,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L38G S139A N151K Y165T",4
"lib2","SARS-CoV-2","TACGTATAGCGGACCA",4,24.88,10.8,-0.03,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGTATATAGTCACT",2,90.2,9.88,-0.96,0.1,2.16,1.05,0,">1 nonsynonymous","S36L S139I",2
"lib2","SARS-CoV-2","TACGTATCAAACACGA",4,32.89,6,-4.84,2,1.5,1.37,0.03,">1 nonsynonymous","N4L F99D",2
"lib2","SARS-CoV-2","TACGTATCAGCTTCTA",2,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71N L183G",2
"lib2","SARS-CoV-2","TACGTATGGGAATGTA",1,25.16,6.13,-4.7,0.79,1.5,1.16,0.01,">1 nonsynonymous","A105E K128T Y143C",3
"lib2","SARS-CoV-2","TACGTATTAGGCATGT",4,69.45,10.91,0.07,0.04,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TACGTATTCATCCTCA",2,79.98,10.57,-0.26,0.04,2.98,1.02,0,">1 nonsynonymous","E10T S53L E154K",3
"lib2","SARS-CoV-2","TACGTCAAGAAAAGAG",4,63.6,10.27,-0.57,0.05,2.91,1.06,0,">1 nonsynonymous","Q84I D97Y",2
"lib2","SARS-CoV-2","TACGTCAATCGCAAAT",15,158.24,10.75,-0.09,0.05,2.94,1.06,0,">1 nonsynonymous","T46M Y123S Q163R",3
"lib2","SARS-CoV-2","TACGTCAATGAAAAGA",11,69.54,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6F L95H",2
"lib2","SARS-CoV-2","TACGTCACTATGTTAG",4,107.84,10.86,0.02,0.05,2.95,1.06,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","TACGTCAGTCGATCCT",3,47.31,10.16,-0.68,0.04,2.97,1.03,0,">1 nonsynonymous","L60V G166A",2
"lib2","SARS-CoV-2","TACGTCCAAGTTCGGC",4,22.48,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N4F E10L N40D G51V F185R",5
"lib2","SARS-CoV-2","TACGTCCATAGCTATA",1,32.25,9.89,-0.95,0.09,2.34,1.04,0,"1 nonsynonymous","V65K",1
"lib2","SARS-CoV-2","TACGTCCATTAATCAG",3,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31A N92R N107R V173T",4
"lib2","SARS-CoV-2","TACGTCCCGGCCCTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L V37H L162*",3
"lib2","SARS-CoV-2","TACGTCCTTGGCCGAA",3,60.51,9.64,-1.2,0.08,2.05,1.06,0,">1 nonsynonymous","I2S E10D D90F D98V A192C",5
"lib2","SARS-CoV-2","TACGTCGTATATAACG",1,21.24,8.77,-2.07,0.35,1.5,1,0.06,">1 nonsynonymous","N40Y Y50V",2
"lib2","SARS-CoV-2","TACGTCTAAATTGCAC",4,20.55,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N13S Y35P S36P K87M D98T Q168V",6
"lib2","SARS-CoV-2","TACGTGAAATTTGTAT",2,37.3,6,-4.84,1.63,1.5,1.09,0,">1 nonsynonymous","F44S D68P Y123D",3
"lib2","SARS-CoV-2","TACGTGACAGATCTTG",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K K56V L95T I104Q",4
"lib2","SARS-CoV-2","TACGTGAGCCACTCCT",10,41.23,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9K Y93S P161E P197K",4
"lib2","SARS-CoV-2","TACGTGCAATTCTACC",25,314.85,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N30K T140L V180F",3
"lib2","SARS-CoV-2","TACGTGCACAAGGGCA",4,82.32,9.81,-1.03,0.1,2.31,1.04,0,">1 nonsynonymous","A89N S147A",2
"lib2","SARS-CoV-2","TACGTGCACTCGCCAA",7,60.94,10.43,-0.41,0.03,2.9,1.08,0,">1 nonsynonymous","N13T L122E",2
"lib2","SARS-CoV-2","TACGTGCAGAAGTACC",3,20.88,9.14,-1.7,0.21,1.67,1.11,0.02,">1 nonsynonymous","N120A R136P",2
"lib2","SARS-CoV-2","TACGTGCCAAAAAAAC",7,73.58,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V37R F70I P133L I138G",4
"lib2","SARS-CoV-2","TACGTGCCGGATAAAC",3,46.79,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","Y93P Q144S",2
"lib2","SARS-CoV-2","TACGTGCCTCCCTTAC",2,9.89,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I2Y C6M V103P N157S",4
"lib2","SARS-CoV-2","TACGTTAAGCATAGAT",4,61.8,10.9,0.07,0.08,2.91,1.1,0,"1 nonsynonymous","N4Q",1
"lib2","SARS-CoV-2","TACGTTAATATAGCTT",14,0.12,NA,NA,NA,NA,NA,NA,"stop","V65* F70L T100G Y121W G146T P161E Q176K",7
"lib2","SARS-CoV-2","TACGTTACAAAGTGAA",1,10.16,6.44,-4.4,0.42,3,1.12,0.01,">1 nonsynonymous","S43L N120P L162T V181L",4
"lib2","SARS-CoV-2","TACGTTAGGTTACAGG",13,180.3,7.3,-3.54,0.15,1.84,1.12,0,">1 nonsynonymous","Q144A C158S",2
"lib2","SARS-CoV-2","TACGTTAGGTTTCGTA",3,63.9,10.82,-0.02,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGTTATACAGGGCA",2,41,6.09,-4.74,1.11,1.5,1.14,0.03,">1 nonsynonymous","G83V D90C Q168L",3
"lib2","SARS-CoV-2","TACGTTATTTCACCGG",5,18.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","C49D P133S",2
"lib2","SARS-CoV-2","TACGTTCAGCCAAAGC",10,119.43,8.4,-2.44,0.08,1.76,1.09,0,">1 nonsynonymous","N64G G117Y T148K T170F",4
"lib2","SARS-CoV-2","TACGTTCATTCGATAT",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R K56L A89S N130A D137T",5
"lib2","SARS-CoV-2","TACGTTCCTCAATACG",1,0.15,NA,NA,NA,NA,NA,NA,"stop","W106* P169R Q176K",3
"lib2","SARS-CoV-2","TACGTTCCTTTCGCTA",6,72.55,8.39,-2.45,0.15,1.79,1.04,0.01,">1 nonsynonymous","T55V N64P W106F G146D",4
"lib2","SARS-CoV-2","TACGTTCGGATTGGAT",8,31.08,10.76,-0.07,0.07,2.85,1.17,0,"1 nonsynonymous","N120K",1
"lib2","SARS-CoV-2","TACGTTCTAATAAAAA",15,107.62,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C61S D68V G86E Y121L",4
"lib2","SARS-CoV-2","TACGTTCTACTTTGGA",1,5.04,6,-4.84,2,1.5,1,0,">1 nonsynonymous","T3R A105E",2
"lib2","SARS-CoV-2","TACGTTCTCAGAAGCC",1,9.33,9.41,-1.43,0.05,1.98,1,0,">1 nonsynonymous","T3D F8K S139T",3
"lib2","SARS-CoV-2","TACGTTCTCTACCTAT",11,76.53,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y119H S139V F167A",3
"lib2","SARS-CoV-2","TACGTTCTTTGTCGTA",1,1.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N F12C T46L C102Q Q144R P149S L183D",7
"lib2","SARS-CoV-2","TACGTTGAAATTTAGT",1,1.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15P D68R V77G Q84D K94F A105F R136D S147N",8
"lib2","SARS-CoV-2","TACGTTGACAGGGCCA",3,10.63,6,-4.84,2,1.5,1.18,0.06,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","TACGTTGACTAAAATG",4,115.95,10.61,-0.23,0.04,2.91,1.04,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","TACGTTGAGCCATTTA",8,146.88,10.8,-0.04,0.07,2.85,1.13,0,"1 nonsynonymous","A192C",1
"lib2","SARS-CoV-2","TACGTTGCGGACGCAG",6,86.16,10.77,-0.06,0.05,2.89,1.09,0,">1 nonsynonymous","Q84M D98T",2
"lib2","SARS-CoV-2","TACGTTGTGAAAACGA",5,3.34,NA,NA,NA,NA,NA,NA,"stop","Y93* V115P P149N",3
"lib2","SARS-CoV-2","TACGTTTACATCAAAT",1,69.76,10.72,-0.12,0.06,2.79,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TACGTTTCAGAATAGA",1,34.4,10.62,-0.22,0.08,2.93,1.03,0,">1 nonsynonymous","F44S K199T",2
"lib2","SARS-CoV-2","TACGTTTCTTCACTAG",8,15.95,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C61V C102S Y143R F156Y",4
"lib2","SARS-CoV-2","TACGTTTTAACAAAAA",7,112.17,10.04,-0.8,0.06,2.58,1.08,0,"1 nonsynonymous","L162C",1
"lib2","SARS-CoV-2","TACTAAAAAAAGCGAC",3,21.18,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","F8S V52F V71A A81C V180E F185I",6
"lib2","SARS-CoV-2","TACTAAAAAATAAGTT",2,12.61,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C49S D112K",2
"lib2","SARS-CoV-2","TACTAAAAGAATTACT",4,0.31,NA,NA,NA,NA,NA,NA,"stop","V32T Y143T F160* E186I",4
"lib2","SARS-CoV-2","TACTAAAAGTTATATT",2,22.07,8.59,-2.24,0.1,2.96,1.09,0.01,">1 nonsynonymous","Y119G F156V V194I",3
"lib2","SARS-CoV-2","TACTAAAAGTTGAATA",2,12.72,10.9,0.06,0.08,2.9,1.08,0,"1 nonsynonymous","R16K",1
"lib2","SARS-CoV-2","TACTAAAATAATCAAA",5,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77T R124H V173L",3
"lib2","SARS-CoV-2","TACTAAAATGTGTCTT",7,3.07,NA,NA,NA,NA,NA,NA,"stop","A33S P54S C61P G86* L95F W106D Y175* P191W S200*",9
"lib2","SARS-CoV-2","TACTAAAATTATCTTA",1,6.26,10.22,-0.61,0.15,3,1,0.01,">1 nonsynonymous","P7M L60G",2
"lib2","SARS-CoV-2","TACTAAACACCTACCG",3,119.27,10.84,0,0.05,2.9,1.09,0,">1 nonsynonymous","T3Q K199F",2
"lib2","SARS-CoV-2","TACTAAACCCCATGTT",13,1.41,NA,NA,NA,NA,NA,NA,"stop","R16* G86S K128A",3
"lib2","SARS-CoV-2","TACTAAACCTCTGGTT",5,38.57,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I28D C49K",2
"lib2","SARS-CoV-2","TACTAAACTAAAAATC",2,8.22,10.78,-0.06,0.11,2.81,1.21,0.01,"1 nonsynonymous","E186R",1
"lib2","SARS-CoV-2","TACTAAACTGTCCATA",6,80.69,10.23,-0.61,0.03,2.9,1.01,0,">1 nonsynonymous","T85M T140W T201S",3
"lib2","SARS-CoV-2","TACTAAACTGTTTTCC",2,41.98,9.78,-1.05,0.07,2.11,1.08,0,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","TACTAAACTTTGGCGT",8,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V G51M",2
"lib2","SARS-CoV-2","TACTAAAGAACCTTAT",2,4.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25V V37L F126R P161G S200L",5
"lib2","SARS-CoV-2","TACTAAAGAATAAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","TACTAAAGACAGGTTG",1,12.38,10.18,-0.66,0.09,2.98,1.09,0,">1 nonsynonymous","G9M F156L",2
"lib2","SARS-CoV-2","TACTAAAGTAGGTTTG",4,6.29,6,-4.84,2,1.5,1.11,0.07,">1 nonsynonymous","V77Q R179F T201L",3
"lib2","SARS-CoV-2","TACTAAATACGAAAGG",5,60.48,10.49,-0.34,0.05,2.97,1.02,0,"1 nonsynonymous","V71T",1
"lib2","SARS-CoV-2","TACTAAATCAGGAGAT",2,29.44,10.85,0.02,0.08,2.96,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTAACAATAACCAC",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18R F99P",2
"lib2","SARS-CoV-2","TACTAACAATGAGGAT",12,169.12,10.58,-0.25,0.03,2.91,1.06,0,">1 nonsynonymous","N4T T55I D90S T201S",4
"lib2","SARS-CoV-2","TACTAACAGAACTTTT",13,274.12,10.64,-0.2,0.03,2.95,1.04,0,">1 nonsynonymous","R27F T201L",2
"lib2","SARS-CoV-2","TACTAACATAACGTTA",1,19.6,9.07,-1.77,0.09,2.86,1.06,0,">1 nonsynonymous","A42C T100V Q144A E154Y",4
"lib2","SARS-CoV-2","TACTAACATCCTCTTA",3,25.21,7.34,-3.49,0.2,1.74,1.26,0.01,"1 nonsynonymous","G86W",1
"lib2","SARS-CoV-2","TACTAACCCCCATGAA",3,22.77,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T63I A89R F99T",3
"lib2","SARS-CoV-2","TACTAACGAAATGCCG",3,137.72,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","Y121A S129L Q176V",3
"lib2","SARS-CoV-2","TACTAACGGTGCAGTT",4,81.54,8.7,-2.13,0.11,2.37,1.07,0,">1 nonsynonymous","I88L Y119R",2
"lib2","SARS-CoV-2","TACTAACTAACCAGAA",3,64.77,6.04,-4.79,0.88,1.5,1.22,0.02,">1 nonsynonymous","S36L L57V A89I S129N",4
"lib2","SARS-CoV-2","TACTAACTAATGTTGC",5,23.06,10.55,-0.29,0.07,2.8,1.2,0,">1 nonsynonymous","D75N L111I F134M",3
"lib2","SARS-CoV-2","TACTAACTCTTGGTTA",7,47.01,9.07,-1.76,0.1,1.5,1.08,0,">1 nonsynonymous","T85S W106N",2
"lib2","SARS-CoV-2","TACTAAGAAGAAATAG",6,60.58,10.86,0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTAAGAGCAGGGTG",11,155.94,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L57N Y123N C150F Y159C",4
"lib2","SARS-CoV-2","TACTAAGAGTTCCGCG",4,10.71,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C6F L95N L122Q D137S S147Y",5
"lib2","SARS-CoV-2","TACTAAGGAAGAATGC",10,144.96,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G117A Q176G",2
"lib2","SARS-CoV-2","TACTAAGGCACGACTT",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L125G K132Y",2
"lib2","SARS-CoV-2","TACTAAGGCCAAAAAG",4,13.35,6.07,-4.76,0.95,1.5,1.21,0.04,">1 nonsynonymous","C6N G51T I142F T201M",4
"lib2","SARS-CoV-2","TACTAAGGGGAACCCA",2,40.12,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","P7I N24W R127H",3
"lib2","SARS-CoV-2","TACTAAGTAACAATCT",3,21.87,9.82,-1.02,0.17,2.26,1.02,0.01,"1 nonsynonymous","S19R",1
"lib2","SARS-CoV-2","TACTAAGTCCCTCAAT",3,32.53,8.59,-2.25,0.11,2.11,1,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","TACTAAGTGTGGTTCG",17,4.89,NA,NA,NA,NA,NA,NA,"stop","K48H V65* G74E A105K E141W",5
"lib2","SARS-CoV-2","TACTAAGTGTTCGTAG",6,2.65,NA,NA,NA,NA,NA,NA,"stop","L5S G51P D112Q R127*",4
"lib2","SARS-CoV-2","TACTAATATAGTGTTC",2,41.58,10.81,-0.03,0.04,2.98,1.05,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","TACTAATCAAATTTTC",1,32,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","E10T S29V D98V C158I",4
"lib2","SARS-CoV-2","TACTAATCCCTTTATC",1,74.73,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","V32L T55R N130L",3
"lib2","SARS-CoV-2","TACTAATCTGATGCGG",3,44.39,10.91,0.07,0.05,2.97,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TACTAATGTTTATTGA",3,8.74,9.32,-1.52,0.31,1.5,1,0.06,">1 nonsynonymous","A42F Y91R D98Y S200M",4
"lib2","SARS-CoV-2","TACTAATTACCTACAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49H I104Y K114*",3
"lib2","SARS-CoV-2","TACTAATTGTTGAAAA",4,51.67,6.06,-4.77,0.65,1.5,1.15,0.01,">1 nonsynonymous","I28R A105H",2
"lib2","SARS-CoV-2","TACTACAACACTACAG",5,41.92,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A89N R124N E141K",3
"lib2","SARS-CoV-2","TACTACAAGCACTCTT",3,53.71,10.43,-0.4,0.07,2.94,1.06,0,">1 nonsynonymous","T85V N120L",2
"lib2","SARS-CoV-2","TACTACAATACGAGAG",5,1.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G S139A",2
"lib2","SARS-CoV-2","TACTACACAAAGACCA",4,140.64,9.76,-1.08,0.04,2.86,1.06,0,">1 nonsynonymous","A33V G146N T201N",3
"lib2","SARS-CoV-2","TACTACACAGTACTGG",4,67.88,10.77,-0.06,0.03,2.95,1.07,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","TACTACACATTGGAAG",5,86.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K48R K56G I88H N107H",4
"lib2","SARS-CoV-2","TACTACACCCCGATAG",7,48.8,10.73,-0.11,0.06,2.85,1.15,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","TACTACACTAATAAAA",11,237.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K26L K56F Y119V Q176I",4
"lib2","SARS-CoV-2","TACTACACTATAACGT",5,19.57,9.72,-1.12,0.17,1.88,1.25,0.01,">1 nonsynonymous","A42V G116P Y178L",3
"lib2","SARS-CoV-2","TACTACACTATAACTG",4,94.47,10.8,-0.04,0.04,2.92,1.09,0,">1 nonsynonymous","D98N R136K",2
"lib2","SARS-CoV-2","TACTACACTCAAAATA",11,102.28,9.61,-1.23,0.11,1.81,1.06,0,">1 nonsynonymous","A81L S184G",2
"lib2","SARS-CoV-2","TACTACATAATAAAAT",2,3.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","TACTACATATAGCATA",13,142.86,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","Y50L N107S F167R",3
"lib2","SARS-CoV-2","TACTACATGACAGCTA",2,12.29,6.64,-4.2,0.26,1.78,1.11,0.01,">1 nonsynonymous","I2G R78L Y93H",3
"lib2","SARS-CoV-2","TACTACATTATCCTAA",7,95.69,8.57,-2.26,0.06,2.82,1.09,0,">1 nonsynonymous","A105V L125R",2
"lib2","SARS-CoV-2","TACTACATTCTTCAAT",3,57.32,9.57,-1.27,0.06,2.7,1.09,0,">1 nonsynonymous","I138P G155R",2
"lib2","SARS-CoV-2","TACTACATTTACTCAT",6,278.19,7.79,-3.05,0.14,1.97,1.11,0.01,">1 nonsynonymous","N109K N151T Y175L",3
"lib2","SARS-CoV-2","TACTACCAACTTCGCG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TACTACCAACTTCTTC",4,102.78,10.89,0.06,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTACCAGACAAGAA",16,217.39,10.63,-0.21,0.03,2.91,1.08,0,">1 nonsynonymous","K56L N110F",2
"lib2","SARS-CoV-2","TACTACCAGGAATTTT",4,33.78,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F70T Y119L",2
"lib2","SARS-CoV-2","TACTACCCACATTCTA",1,4.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C150F E154R",2
"lib2","SARS-CoV-2","TACTACCCCCACAGCC",7,1.05,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib2","SARS-CoV-2","TACTACCCCTAACGAT",4,0.75,NA,NA,NA,NA,NA,NA,"stop","D34H R136*",2
"lib2","SARS-CoV-2","TACTACCCTGGAACTA",18,118,8.23,-2.6,0.21,1.5,1.05,0.02,">1 nonsynonymous","R27P G86D",2
"lib2","SARS-CoV-2","TACTACCTTACCGTTA",5,4.33,NA,NA,NA,NA,NA,NA,"stop","Y35D S41* D68E A145L",4
"lib2","SARS-CoV-2","TACTACGAAATTAGGA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","F8I Y39P T55G F99* C158K K198R",6
"lib2","SARS-CoV-2","TACTACGACCCCACGC",2,7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65K K94L",2
"lib2","SARS-CoV-2","TACTACGCGCAACATG",3,1.06,NA,NA,NA,NA,NA,NA,"stop","F44C G83W V103H Y175D K198*",5
"lib2","SARS-CoV-2","TACTACTAATTCAAGA",3,106.19,9.12,-1.71,0.09,1.81,1.1,0,">1 nonsynonymous","V11F T55G N107R A190V",4
"lib2","SARS-CoV-2","TACTACTACTCGACCG",4,24.7,9.17,-1.67,0.1,2.04,1.04,0.01,">1 nonsynonymous","S43N K56S C61L S69E V173L",5
"lib2","SARS-CoV-2","TACTACTCCCGCCCAA",12,109.79,10.02,-0.82,0.07,2.29,1.02,0,">1 nonsynonymous","C49L S184T",2
"lib2","SARS-CoV-2","TACTACTTAGAATAAT",1,14.52,9.04,-1.79,0.28,1.5,1.33,0.02,">1 nonsynonymous","L5C L60M N107S G152R",4
"lib2","SARS-CoV-2","TACTACTTCCCGAGTA",1,12.93,7.54,-3.3,0.19,1.61,1.07,0.02,">1 nonsynonymous","E135R N157K",2
"lib2","SARS-CoV-2","TACTACTTTACAAATC",5,13.01,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T85F W106C",2
"lib2","SARS-CoV-2","TACTAGAAAGCATAAC",2,64.6,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4K S41G K94T",3
"lib2","SARS-CoV-2","TACTAGAACGTCTTTA",4,133.72,6.14,-4.7,0.53,1.5,1.13,0.01,">1 nonsynonymous","N40S G101C",2
"lib2","SARS-CoV-2","TACTAGACTCGCCAAC",6,0.91,NA,NA,NA,NA,NA,NA,"stop","L38T L60* F126A Y175C",4
"lib2","SARS-CoV-2","TACTAGAGCTGTACTA",4,8.2,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S29K F99I A105G E141R T201A",5
"lib2","SARS-CoV-2","TACTAGAGTTGCTCAT",2,16.46,8.6,-2.23,0.24,1.5,1.03,0.04,">1 nonsynonymous","G9K G83A F99M K198S",4
"lib2","SARS-CoV-2","TACTAGATGCCTATGC",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C Y50I S147I",3
"lib2","SARS-CoV-2","TACTAGATGTATAACT",3,10.21,6.43,-4.4,0.99,1.5,1.06,0.06,">1 nonsynonymous","G86K F126T G174T",3
"lib2","SARS-CoV-2","TACTAGATTTGGTAAG",7,90.83,9.52,-1.31,0.06,2.64,1.08,0,">1 nonsynonymous","S45L N110H I142P",3
"lib2","SARS-CoV-2","TACTAGCAGATTTAAA",1,10.31,8.82,-2.02,0.26,2.68,1.23,0.02,">1 nonsynonymous","C61L D90E T170F",3
"lib2","SARS-CoV-2","TACTAGCAGGAGTACT",11,200.79,6.22,-4.62,0.27,1.5,1.12,0,">1 nonsynonymous","T3A N107H F134I Y175W S200N",5
"lib2","SARS-CoV-2","TACTAGCCCTACTAAA",10,7.97,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T15C D34Y Y123L",3
"lib2","SARS-CoV-2","TACTAGCGATCCCTCA",1,0.33,NA,NA,NA,NA,NA,NA,"stop","I104S I142*",2
"lib2","SARS-CoV-2","TACTAGCGGAGGCGTA",8,196.6,10.57,-0.26,0.03,2.89,1.11,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","TACTAGCTCTATTTAA",1,23.91,8.3,-2.53,0.15,2.41,1.1,0.01,">1 nonsynonymous","T55L A145W S184Y",3
"lib2","SARS-CoV-2","TACTAGCTTAGAACAA",2,34.67,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","Y39R C150W V173S",3
"lib2","SARS-CoV-2","TACTAGGATGCGAAAC",9,136.53,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G9L V37T D98F P177C S184F",5
"lib2","SARS-CoV-2","TACTAGGCAGAGGTGC",2,20.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S53L V71L A89L F99A Y119T",5
"lib2","SARS-CoV-2","TACTAGGTAAGCACTT",1,16.7,10.23,-0.61,0.06,2.9,1.06,0,">1 nonsynonymous","A14G C61V",2
"lib2","SARS-CoV-2","TACTAGTAGTCAAAGT",3,0.52,NA,NA,NA,NA,NA,NA,"stop","L5N R27E P149* G155Y T170M",5
"lib2","SARS-CoV-2","TACTAGTGCCCTGATT",3,39.54,6,-4.84,1.58,1.5,1.12,0.01,">1 nonsynonymous","Y21E L57P G83S K94W G116V",5
"lib2","SARS-CoV-2","TACTAGTTTCTGGGGT",10,97.63,9.7,-1.14,0.11,2.24,1.09,0,">1 nonsynonymous","K26A C61M D90Y T148R",4
"lib2","SARS-CoV-2","TACTATAAAACATATG",3,57.03,10.23,-0.61,0.12,2.74,1.07,0.01,">1 nonsynonymous","A14L D98N",2
"lib2","SARS-CoV-2","TACTATAAAGTATTTT",16,114.92,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N92L P169I S200K",3
"lib2","SARS-CoV-2","TACTATAAAGTGATAT",4,152.05,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A89P L122W I138Q P177T",4
"lib2","SARS-CoV-2","TACTATAACCAGAAAA",1,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y G155V L162M",3
"lib2","SARS-CoV-2","TACTATAAGCAGTAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","W106* P197S",2
"lib2","SARS-CoV-2","TACTATAAGCCGTCAG",2,64.23,10.66,-0.18,0.07,2.88,1.05,0,">1 nonsynonymous","A22E Y66L D97E",3
"lib2","SARS-CoV-2","TACTATAAGTGTAAGG",1,25.18,6.53,-4.3,0.68,1.5,1.29,0.04,">1 nonsynonymous","E10C N40A L57R",3
"lib2","SARS-CoV-2","TACTATAATGTTTCGA",1,0,NA,NA,NA,NA,NA,NA,"stop","I80*",1
"lib2","SARS-CoV-2","TACTATACACCAATTG",4,10.93,7.17,-3.67,0.45,1.5,1.16,0.06,">1 nonsynonymous","K87W V103T I142Y T201K",4
"lib2","SARS-CoV-2","TACTATACACTTAATA",8,117.03,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86S F99S N110K N130F Q176S",5
"lib2","SARS-CoV-2","TACTATAGCAACTACT",4,93.09,9.64,-1.19,0.09,2.02,1.07,0,">1 nonsynonymous","F8V A14I S45Y",3
"lib2","SARS-CoV-2","TACTATAGCACAAATT",3,30.34,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V20R T55S I138M N151Q",4
"lib2","SARS-CoV-2","TACTATAGTAGAGGAG",15,194.6,9.8,-1.04,0.04,2.65,1.05,0,">1 nonsynonymous","F134G Q144L",2
"lib2","SARS-CoV-2","TACTATAGTCTTCGTT",2,28.97,6.02,-4.82,0.9,1.5,1.14,0.01,">1 nonsynonymous","T46G P133L",2
"lib2","SARS-CoV-2","TACTATATCATGTTGT",4,19.46,7.84,-3,0.34,1.5,1,0.07,">1 nonsynonymous","L38G I72V K94G",3
"lib2","SARS-CoV-2","TACTATATGTAACGTA",1,17.54,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y93H F167S",2
"lib2","SARS-CoV-2","TACTATCAATACTGAT",3,56.17,9.7,-1.13,0.12,2.26,1,0.01,">1 nonsynonymous","V11S S147K",2
"lib2","SARS-CoV-2","TACTATCAATCTTCTA",4,0.48,NA,NA,NA,NA,NA,NA,"stop","N1G C6V A81D P82S F126*",5
"lib2","SARS-CoV-2","TACTATCACATTTGAG",5,31.78,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K26P I138M",2
"lib2","SARS-CoV-2","TACTATCACGCCCACG",5,138.08,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R16H K56A F62A W106V P177T",5
"lib2","SARS-CoV-2","TACTATCACTCAATCA",4,50.93,10.11,-0.73,0.07,2.65,1.06,0,">1 nonsynonymous","S41V K94H S184C",3
"lib2","SARS-CoV-2","TACTATCATCTGCCAA",4,42.63,6.04,-4.8,1.24,1.5,1.28,0.03,">1 nonsynonymous","S29K N40Y N64F G86R",4
"lib2","SARS-CoV-2","TACTATCCATTAAACT",10,293.5,9.96,-0.87,0.04,2.64,1.05,0,">1 nonsynonymous","C6S F8A Y35V",3
"lib2","SARS-CoV-2","TACTATCCGTAGCTAT",2,17.71,9.91,-0.93,0.09,2.4,1,0.01,">1 nonsynonymous","I104M D112I",2
"lib2","SARS-CoV-2","TACTATCCTAAATACA",4,45.46,9.96,-0.88,0.07,2.56,1.14,0,">1 nonsynonymous","Y35I S45V N120G T148M",4
"lib2","SARS-CoV-2","TACTATCCTTCAAAGT",8,1.31,NA,NA,NA,NA,NA,NA,"stop","S19* T100* T201*",3
"lib2","SARS-CoV-2","TACTATCGGCATGCCT",15,34.85,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S41F P54L D59T G83N P96Y T100L V181A",7
"lib2","SARS-CoV-2","TACTATCTACCTCAAG",5,0.91,NA,NA,NA,NA,NA,NA,"stop","I104* Q176I",2
"lib2","SARS-CoV-2","TACTATCTGCACAGCA",16,160.44,8.71,-2.13,0.07,1.58,1.14,0,">1 nonsynonymous","F12R T63A S129T Q163R K199T",5
"lib2","SARS-CoV-2","TACTATCTGGAGAATA",5,76.18,10.91,0.07,0.05,2.99,1.02,0,">1 nonsynonymous","S41R F62T Q163A",3
"lib2","SARS-CoV-2","TACTATGGGAAAGGCC",2,62.73,9.47,-1.37,0.05,2.6,1.1,0,">1 nonsynonymous","A33I T63A G146Y",3
"lib2","SARS-CoV-2","TACTATTAACATCCGT",6,20.09,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","Y35I P96D I104S Y121A",4
"lib2","SARS-CoV-2","TACTATTAAGGGAAGC",9,109.95,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12L W23L T46A Y50L T55N",5
"lib2","SARS-CoV-2","TACTATTAAGTAAGGC",3,63.61,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N1V Y39L R73F N120H A145T V173D",6
"lib2","SARS-CoV-2","TACTATTATATTCCCG",15,363.88,6.27,-4.56,0.63,1.5,1.18,0.02,">1 nonsynonymous","G51F V153R Y178L K198M",4
"lib2","SARS-CoV-2","TACTATTCATCGATAT",2,69.94,10.62,-0.21,0.05,2.91,1.09,0,">1 nonsynonymous","G9W E141S",2
"lib2","SARS-CoV-2","TACTATTCCATATACA",3,19.29,9.76,-1.07,0.2,2.32,1.1,0.02,">1 nonsynonymous","P149H G155F",2
"lib2","SARS-CoV-2","TACTATTGAACTGCAT",19,11532.59,10.65,-0.19,0.01,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTATTGCGTTAAGA",3,42.99,9.3,-1.54,0.08,2.76,1.15,0,"1 nonsynonymous","G166I",1
"lib2","SARS-CoV-2","TACTATTGGTTAAAGT",6,72.12,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A89F R124T P133W C150M",4
"lib2","SARS-CoV-2","TACTATTTAAAAATGG",2,15.91,8.61,-2.23,0.13,2.41,1.06,0.01,">1 nonsynonymous","E135V N151R T170N L188P",4
"lib2","SARS-CoV-2","TACTATTTAATAAAAT",1,7.24,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15F S45C E141S C158A",4
"lib2","SARS-CoV-2","TACTATTTTTTATAAT",1,69.42,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A105S F156N F167E Y175G",4
"lib2","SARS-CoV-2","TACTCAAAACAAAGCG",4,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K T55L F99H E135R N151Y Y165R",6
"lib2","SARS-CoV-2","TACTCAAAGCCGCCAA",6,1.26,NA,NA,NA,NA,NA,NA,"stop","N40* A89S F134I G146R H189F",5
"lib2","SARS-CoV-2","TACTCAAAGCTAGTTC",11,167.44,9.14,-1.7,0.07,2.61,1.05,0,">1 nonsynonymous","N1Q G146M E154T",3
"lib2","SARS-CoV-2","TACTCAACGAAAACAG",2,54.95,10.8,-0.03,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTCAACTAGAAAGA",1,43.25,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","T63F Y123K L162G F167L",4
"lib2","SARS-CoV-2","TACTCAACTCACCCAC",7,70.61,10.76,-0.08,0.06,2.93,1.07,0,">1 nonsynonymous","S45T T148V",2
"lib2","SARS-CoV-2","TACTCAATCACAGTTT",3,23.22,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N4W I80S C102I N107A R136T",5
"lib2","SARS-CoV-2","TACTCAATGGTAAAAT",1,21.03,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","C31Y D112S G174D",3
"lib2","SARS-CoV-2","TACTCAATTAAACTAA",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R E10R L60V I88L A89T F134Y",6
"lib2","SARS-CoV-2","TACTCAATTCTAACTG",9,51.12,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99S A192L",2
"lib2","SARS-CoV-2","TACTCACAAATAAGAA",4,68.58,10.19,-0.64,0.05,2.76,1.05,0,">1 nonsynonymous","T3F K48S N151L",3
"lib2","SARS-CoV-2","TACTCACACCGAGTGC",1,0.72,NA,NA,NA,NA,NA,NA,"stop","C6K Y143*",2
"lib2","SARS-CoV-2","TACTCACATATTGTTA",23,367.96,10.08,-0.76,0.04,2.62,1.04,0,">1 nonsynonymous","A22K P161A",2
"lib2","SARS-CoV-2","TACTCACCAATACAAG",3,50.82,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","R127N C150N A192T",3
"lib2","SARS-CoV-2","TACTCACCCTGCCCCG",5,61.48,9.71,-1.13,0.12,2.58,1.06,0.01,">1 nonsynonymous","Y123E K128S",2
"lib2","SARS-CoV-2","TACTCACTATTTGGAA",2,60.29,9.92,-0.91,0.07,2.91,1.13,0,">1 nonsynonymous","R27T S29T G152S F156S",4
"lib2","SARS-CoV-2","TACTCACTCAGAATTG",1,67.97,10.84,0,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTCACTCTAAGCAA",2,5.86,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","C6K C61S D68P F156T",4
"lib2","SARS-CoV-2","TACTCACTGGATGCTT",1,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35I C61K D90L V180W",4
"lib2","SARS-CoV-2","TACTCAGAGAAGTTAA",5,46.23,10.45,-0.39,0.08,2.92,1.08,0,"1 nonsynonymous","E186M",1
"lib2","SARS-CoV-2","TACTCAGCTAGCTCGA",11,185.83,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A18Q L38H Q176H",3
"lib2","SARS-CoV-2","TACTCATAAGCCCTAT",7,1.04,NA,NA,NA,NA,NA,NA,"stop","S29* D90W",2
"lib2","SARS-CoV-2","TACTCATAATTATGCA",13,220.02,9.66,-1.18,0.05,2.89,1.06,0,">1 nonsynonymous","I28L N110S N120T",3
"lib2","SARS-CoV-2","TACTCATCACGTACAG",1,2.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TACTCATCCCGTGCTA",7,103.44,10.2,-0.64,0.04,2.95,1.06,0,">1 nonsynonymous","P54A P169M",2
"lib2","SARS-CoV-2","TACTCATGGAGAATGG",4,53.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T140A P161L",2
"lib2","SARS-CoV-2","TACTCATGTGGAGGAG",5,5.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S A42H C49L Q84K I104Q P197L",6
"lib2","SARS-CoV-2","TACTCATTACAAACAC",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K N92S Y123S",3
"lib2","SARS-CoV-2","TACTCATTCCATACGA",5,34.5,10.38,-0.46,0.08,2.99,1.03,0,">1 nonsynonymous","F156A S184N",2
"lib2","SARS-CoV-2","TACTCATTGAGGCAAA",8,59.8,9.96,-0.88,0.1,2.43,1.05,0,"1 nonsynonymous","S113A",1
"lib2","SARS-CoV-2","TACTCATTTCCACCCG",1,8.28,6,-4.84,2,3,1.08,0,">1 nonsynonymous","S43A Y93S",2
"lib2","SARS-CoV-2","TACTCCACAAATGAAA",2,131.64,10.79,-0.05,0.05,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTCCACACGTCGCT",2,24.51,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","G74C G86W",2
"lib2","SARS-CoV-2","TACTCCACCCTTTTAG",7,90.6,9.18,-1.65,0.05,2.97,1.03,0,">1 nonsynonymous","A42G Y119T Q144R",3
"lib2","SARS-CoV-2","TACTCCACTCCTTAGG",4,23.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1D L57M D137T",3
"lib2","SARS-CoV-2","TACTCCCGACATCGGC",3,46.99,10.86,0.03,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTCCCTCCATAGTG",4,62.96,9.86,-0.97,0.06,2.56,1.02,0,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","TACTCCCTCCCCATTT",14,14.23,NA,NA,NA,NA,NA,NA,"stop","E10F S43T R78L F160*",4
"lib2","SARS-CoV-2","TACTCCGAGTAAATCT",2,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44E K94L N118C N151D",4
"lib2","SARS-CoV-2","TACTCCGATATATGAG",6,70.71,10.3,-0.53,0.04,2.88,1.04,0,">1 nonsynonymous","E10L T63R S147L",3
"lib2","SARS-CoV-2","TACTCCGCAAAGTCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82R K94Y N110W",3
"lib2","SARS-CoV-2","TACTCCGCCTTCTACA",5,0.72,NA,NA,NA,NA,NA,NA,"stop","C6R P82L D98V P177A L183* K199Y",6
"lib2","SARS-CoV-2","TACTCCGGACTGCCAC",2,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S F99V W106G R136V",4
"lib2","SARS-CoV-2","TACTCCTAAGCAGTTG",1,1.26,NA,NA,NA,NA,NA,NA,"stop","T63S V77* K87S W106L F156L",5
"lib2","SARS-CoV-2","TACTCCTGCAACAAAG",2,17.05,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V20L K87R K128E G146L",4
"lib2","SARS-CoV-2","TACTCGAAAGAAAAAG",2,0.22,NA,NA,NA,NA,NA,NA,"stop","K56M D68L N92S I104*",4
"lib2","SARS-CoV-2","TACTCGAATGAAATCA",6,36.37,8.75,-2.08,0.25,1.5,1.03,0.03,"1 nonsynonymous","A105K",1
"lib2","SARS-CoV-2","TACTCGAATGTAAATA",4,80.32,10.59,-0.24,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTCGAGAGCAAACT",3,52.42,10.15,-0.69,0.1,2.26,1.07,0,"1 nonsynonymous","V103T",1
"lib2","SARS-CoV-2","TACTCGAGGGCCGCAG",4,493.79,6,-4.84,1.28,1.5,1.11,0,">1 nonsynonymous","V11A Y119P P133L I142K S147N",5
"lib2","SARS-CoV-2","TACTCGCAAGTATAGG",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N1R C6* V173G",3
"lib2","SARS-CoV-2","TACTCGCACTTCAAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I80A",1
"lib2","SARS-CoV-2","TACTCGCCATCTAGAG",1,10.9,7.57,-3.26,0.45,2.06,1.03,0.06,">1 nonsynonymous","D59S A81N G166Y",3
"lib2","SARS-CoV-2","TACTCGCGCCTTCTAA",3,111.36,10.82,-0.02,0.06,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TACTCGGACCAACACG",7,114.31,10.76,-0.08,0.06,2.91,1.1,0,">1 nonsynonymous","R27S E141D",2
"lib2","SARS-CoV-2","TACTCGGATGAGAGAT",6,70.53,10,-0.84,0.09,2.54,1.05,0,">1 nonsynonymous","P82V S200P",2
"lib2","SARS-CoV-2","TACTCGGCTCACCGAT",6,1.3,NA,NA,NA,NA,NA,NA,"stop","R27K T100* S147L",3
"lib2","SARS-CoV-2","TACTCGGCTCGGCGTA",4,19.58,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S29I K48Y Y93D G155L",4
"lib2","SARS-CoV-2","TACTCGGTGATGATAA",8,161.24,10.78,-0.05,0.04,2.98,1.05,0,"1 nonsynonymous","D98S",1
"lib2","SARS-CoV-2","TACTCGGTTCAAGCTT",11,61.19,9.07,-1.76,0.16,1.5,1,0.01,">1 nonsynonymous","A14D D59Y D98W N110G",4
"lib2","SARS-CoV-2","TACTCTAAACTTCATA",8,71.89,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y93M S139N",2
"lib2","SARS-CoV-2","TACTCTAGCGAGTAGT",8,39.9,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","K56R G86P",2
"lib2","SARS-CoV-2","TACTCTAGGGATATTG",2,23.36,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P96H Y159D",2
"lib2","SARS-CoV-2","TACTCTAGTGAGCAAA",5,35.04,10.25,-0.59,0.1,2.88,1.03,0.01,">1 nonsynonymous","A33F A89M",2
"lib2","SARS-CoV-2","TACTCTAGTTTTTAAC",9,132.3,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37R C158Y",2
"lib2","SARS-CoV-2","TACTCTCCGGCAACCT",3,17.75,6,-4.84,2,3,1.03,0,">1 nonsynonymous","I72L N92K",2
"lib2","SARS-CoV-2","TACTCTCGAAGCACTA",2,44.31,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L60Q T100C E141M C158Q K198I",5
"lib2","SARS-CoV-2","TACTCTGAAGAAACAT",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90F I138S G152M T170P A190D",5
"lib2","SARS-CoV-2","TACTCTGTGAGTCTAT",5,41.04,10.4,-0.44,0.06,2.85,1.07,0,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","TACTCTTCAAAACTAA",6,0.73,NA,NA,NA,NA,NA,NA,"stop","R27* A42V N58S I72K G155F",5
"lib2","SARS-CoV-2","TACTCTTGTGAACCAG",7,48,10.3,-0.53,0.05,2.88,1.02,0,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","TACTGAAAATAAGTAG",4,8.24,10.4,-0.44,0.14,2.75,1.14,0.01,">1 nonsynonymous","D34P V115P",2
"lib2","SARS-CoV-2","TACTGAAACACCAACA",7,12.96,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","T3L K56E F70V A190R",4
"lib2","SARS-CoV-2","TACTGAAACGCATGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58Q G83N N92L G174L V180W",5
"lib2","SARS-CoV-2","TACTGAAACTGAAAAA",8,152.42,10.27,-0.57,0.03,2.88,1.14,0,">1 nonsynonymous","K114R F156V",2
"lib2","SARS-CoV-2","TACTGAAAGAAGACAA",3,90.53,9.79,-1.05,0.09,2.43,1.06,0,">1 nonsynonymous","V20T K114A L122Y",3
"lib2","SARS-CoV-2","TACTGAAAGAGTAAAC",2,6.78,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L38W D68R G86S",3
"lib2","SARS-CoV-2","TACTGAAAGTCGTTAT",4,32.72,9.58,-1.25,0.13,2.02,1.06,0.01,">1 nonsynonymous","S45P T55C Y178V T201M",4
"lib2","SARS-CoV-2","TACTGAAATTGTAAGT",9,78.9,10.28,-0.55,0.03,2.91,1.06,0,">1 nonsynonymous","K56W T148V",2
"lib2","SARS-CoV-2","TACTGAACAGGAATGC",7,66.29,8.32,-2.51,0.13,2.75,1.09,0.01,">1 nonsynonymous","G9S R73Y",2
"lib2","SARS-CoV-2","TACTGAAGAAAGAGTT",9,86.91,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9K Y93S P161E P197K",4
"lib2","SARS-CoV-2","TACTGAAGTGACACGG",9,32.03,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N1M F47V N58L Y143R P161F",5
"lib2","SARS-CoV-2","TACTGAATAATGTGAA",7,38.73,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Q84E F99S",2
"lib2","SARS-CoV-2","TACTGAATATCGAAGT",9,130.86,10.8,-0.03,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTGAATCACCTTAT",1,3.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A L38Y Y119V",3
"lib2","SARS-CoV-2","TACTGAATTACCACCG",19,475.44,8.22,-2.61,0.1,2.32,1.06,0,">1 nonsynonymous","S41F P149K Q176E",3
"lib2","SARS-CoV-2","TACTGACAGAGGGTTC",10,161.68,9.91,-0.92,0.08,2.27,1.07,0,">1 nonsynonymous","F99Y P133A",2
"lib2","SARS-CoV-2","TACTGACAGATTCTAC",7,74.67,9.4,-1.43,0.06,1.99,1.04,0,">1 nonsynonymous","G9C F44H G83Q",3
"lib2","SARS-CoV-2","TACTGACAGTATCTGA",1,3.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22I D34H C102Y S113P G146L",5
"lib2","SARS-CoV-2","TACTGACCCATAGAAT",4,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q T55C N64W T148D",4
"lib2","SARS-CoV-2","TACTGACGACCATATA",8,30.86,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","A18D K26T V71Y V115I V153G S184F",6
"lib2","SARS-CoV-2","TACTGACTATCTACCC",2,37.62,9.92,-0.91,0.07,2.5,1,0,">1 nonsynonymous","Y35P A105T L187P",3
"lib2","SARS-CoV-2","TACTGACTCGGATGGA",1,9.6,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","L95Y S164Y",2
"lib2","SARS-CoV-2","TACTGACTGATAAGTT",13,3.77,NA,NA,NA,NA,NA,NA,"stop","F99* R127L",2
"lib2","SARS-CoV-2","TACTGAGAACTGTTAT",12,76.43,9.87,-0.96,0.08,2.15,1.05,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","TACTGAGCATAGAGTA",2,15.46,10.23,-0.61,0.1,2.94,1.09,0.01,"1 nonsynonymous","Q168M",1
"lib2","SARS-CoV-2","TACTGAGGAAAAACAC",8,186.38,10.04,-0.79,0.05,2.43,1.02,0,">1 nonsynonymous","C49F N120K K198L",3
"lib2","SARS-CoV-2","TACTGAGGAACGCAAG",5,4.56,NA,NA,NA,NA,NA,NA,"stop","S19N R73* D90T G117S N130T P149C K198L",7
"lib2","SARS-CoV-2","TACTGAGGAAGGCTCA",8,2.68,NA,NA,NA,NA,NA,NA,"stop","Y39* C61V E76G N92R D98* I104T N130I V173Y",8
"lib2","SARS-CoV-2","TACTGAGTGAACACCC",7,72.86,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A33H P82F S139D V173F P197T",5
"lib2","SARS-CoV-2","TACTGATAACGACATG",1,33.59,6.28,-4.56,0.76,1.5,1.23,0.02,">1 nonsynonymous","T3V K114M Y159R",3
"lib2","SARS-CoV-2","TACTGATACCATTGAC",5,68.43,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","Y39M G116D L122S G152S F167K",5
"lib2","SARS-CoV-2","TACTGATAGAAAAAAT",1,0.44,NA,NA,NA,NA,NA,NA,"stop","I2* I28V",2
"lib2","SARS-CoV-2","TACTGATCATTAGAAG",6,69.97,10.71,-0.13,0.05,2.92,1.09,0,"1 nonsynonymous","P54G",1
"lib2","SARS-CoV-2","TACTGATCCCGCCAGT",3,17.51,10.69,-0.15,0.08,2.98,1,0,">1 nonsynonymous","N1E F44M Q168Y",3
"lib2","SARS-CoV-2","TACTGATCGAATCTAA",14,87.24,6.2,-4.63,0.6,1.5,1.16,0.02,">1 nonsynonymous","S19M A33E L60V S200N",4
"lib2","SARS-CoV-2","TACTGATGGCGCAACC",1,20.31,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","L95T Y121S",2
"lib2","SARS-CoV-2","TACTGATTAACATACA",8,43.3,10.3,-0.54,0.06,2.76,1.05,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","TACTGATTACAGGTAG",6,33.16,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N13C E135C G155W",3
"lib2","SARS-CoV-2","TACTGATTTCCTCGTA",3,97.54,9.75,-1.08,0.09,2.2,1.07,0,">1 nonsynonymous","T15C F44S",2
"lib2","SARS-CoV-2","TACTGCAAATGATTTT",3,67.39,9.96,-0.88,0.07,2.51,1.07,0,">1 nonsynonymous","D34H S41E P54R Q144A",4
"lib2","SARS-CoV-2","TACTGCATCACCCCTT",2,16.79,7.68,-3.16,0.23,1.5,1.06,0.02,">1 nonsynonymous","N157V A190W K199F",3
"lib2","SARS-CoV-2","TACTGCATTTGTTCAC",5,75.69,9.58,-1.25,0.13,2.39,1,0.01,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","TACTGCCACACCTCCT",9,53.97,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C6P G83I L95E",3
"lib2","SARS-CoV-2","TACTGCCAGAGAAAAG",2,66.41,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37Q G86V",2
"lib2","SARS-CoV-2","TACTGCCCGGTTATCA",10,79.75,10.84,0,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTGCGAACAGGAAT",4,44.44,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y50T D97E Y119C K128I R136Q",5
"lib2","SARS-CoV-2","TACTGCGAGTCAATGT",4,195.42,10.31,-0.53,0.03,2.88,1.07,0,">1 nonsynonymous","I104F K128N P149G F156R",4
"lib2","SARS-CoV-2","TACTGCGTGTCTGTAT",1,7.38,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","Y93A Y165Q A192T",3
"lib2","SARS-CoV-2","TACTGGAATGCCAGAA",7,100.88,10.68,-0.15,0.04,2.94,1.07,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","TACTGGACAATAACCC",7,3.59,NA,NA,NA,NA,NA,NA,"stop","S29* S43H N58L A105R",4
"lib2","SARS-CoV-2","TACTGGAGAGATGTTA",3,54.31,10.93,0.1,0.05,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TACTGGATAACGTAAC",1,7.1,6,-4.84,2,3,1.04,0,">1 nonsynonymous","S41V Y50E G166P",3
"lib2","SARS-CoV-2","TACTGGCAAGAACACG",16,201.74,10.69,-0.14,0.03,2.94,1.05,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","TACTGGCATACTCCTG",1,6.13,9.08,-1.76,0.16,2.79,1.02,0.01,">1 nonsynonymous","S45R F99Y S129F G155A",4
"lib2","SARS-CoV-2","TACTGGCTCAGACACG",2,10.83,9.16,-1.68,0.45,1.88,1.11,0.07,">1 nonsynonymous","Y39H T85W G174W",3
"lib2","SARS-CoV-2","TACTGGGATAAGACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* A105V V115I G152S E186R",5
"lib2","SARS-CoV-2","TACTGGGCGACACTAG",2,25.48,8.85,-1.99,0.21,1.65,1.1,0.02,">1 nonsynonymous","S45R L60P G83H",3
"lib2","SARS-CoV-2","TACTGGGGGTCATTGT",4,23.78,6.04,-4.8,0.54,1.5,1.1,0,">1 nonsynonymous","R27S C61V V77S Y175I",4
"lib2","SARS-CoV-2","TACTGGTACAGCGACC",1,31,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S36L R127Q A145G F156L",4
"lib2","SARS-CoV-2","TACTGGTCACATAATT",3,24.65,9.8,-1.04,0.1,2.15,1.02,0,">1 nonsynonymous","S41L D59I P149L F160W",4
"lib2","SARS-CoV-2","TACTGGTTGCGACGCA",1,34.51,9.67,-1.16,0.09,2.09,1,0,">1 nonsynonymous","Y123I P169A T201G",3
"lib2","SARS-CoV-2","TACTGTAACGCTGTCC",1,10.73,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","T85I L95V G101H T140S P149Y",5
"lib2","SARS-CoV-2","TACTGTACGCTTACAC",2,38.41,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","S36V V77D G117L G146E G196W S200W",6
"lib2","SARS-CoV-2","TACTGTATGGTCAAAA",11,262.83,8.45,-2.39,0.12,2.75,1.07,0.01,">1 nonsynonymous","L5N A22K G152D Y159L",4
"lib2","SARS-CoV-2","TACTGTATGTAACAAA",5,176.56,10.64,-0.2,0.02,2.92,1.07,0,">1 nonsynonymous","P96S S129T",2
"lib2","SARS-CoV-2","TACTGTCATCTTAATG",4,68.84,10.38,-0.45,0.05,2.92,1.06,0,">1 nonsynonymous","F62Q S147I",2
"lib2","SARS-CoV-2","TACTGTCCAGAATAAC",1,8.8,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","Y21K S69R K94F P149S",4
"lib2","SARS-CoV-2","TACTGTCCATCTACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","L60I R136*",2
"lib2","SARS-CoV-2","TACTGTGAAATCTGTT",1,65.71,10.84,0.01,0.06,2.86,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTGTGCCGACGACA",15,1.17,NA,NA,NA,NA,NA,NA,"stop","D59N Y123* Y165*",3
"lib2","SARS-CoV-2","TACTGTGCGGTAAACA",1,0.46,NA,NA,NA,NA,NA,NA,"stop","A22T N30V I88R I138G P149T Q176*",6
"lib2","SARS-CoV-2","TACTGTTACTTCAATT",4,273.34,9.3,-1.54,0.08,1.65,1.1,0,">1 nonsynonymous","S43L Y66K S129C Y178N",4
"lib2","SARS-CoV-2","TACTGTTATTCTCGTT",3,48.51,10.86,0.03,0.05,2.93,1.08,0,">1 nonsynonymous","N1I L122M",2
"lib2","SARS-CoV-2","TACTGTTCTGTCTAAT",1,33.4,8.37,-2.46,0.14,2.63,1.08,0.01,">1 nonsynonymous","A67V V115L Y159M",3
"lib2","SARS-CoV-2","TACTTAAAAAACATCA",12,83.94,9.28,-1.55,0.09,1.65,1.05,0,">1 nonsynonymous","G51C E141L S164N",3
"lib2","SARS-CoV-2","TACTTAAAAATACAAA",3,93.94,9.33,-1.51,0.06,2.71,1.11,0,">1 nonsynonymous","F8V F156N",2
"lib2","SARS-CoV-2","TACTTAAAAATAGTAT",4,52.56,10.92,0.09,0.04,2.97,1.04,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","TACTTAAAACATACAA",6,146.84,10.91,0.07,0.04,2.92,1.09,0,"1 nonsynonymous","Y39V",1
"lib2","SARS-CoV-2","TACTTAAAATAACCAT",7,117.66,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4W C150E P177S",3
"lib2","SARS-CoV-2","TACTTAAACTGTATAT",2,78.38,10.83,0,0.08,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTAAAGCCCATTA",1,22.9,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","P7K Y21K D75G N107V",4
"lib2","SARS-CoV-2","TACTTAAAGGCACCAG",10,62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V11A N24K D59L G117P",4
"lib2","SARS-CoV-2","TACTTAAATACTAGTA",9,26.72,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Q84H L95S I138K V194G",4
"lib2","SARS-CoV-2","TACTTAAATCTCATCG",1,15.75,7.31,-3.52,0.35,2.31,1.2,0.02,">1 nonsynonymous","C49S D98R P177S T201A",4
"lib2","SARS-CoV-2","TACTTAACAATAGATT",1,19.24,6.55,-4.29,0.36,3,1.11,0.01,">1 nonsynonymous","G9S F12T D59K K114L Y143N N171F P197S",7
"lib2","SARS-CoV-2","TACTTAACATACCATT",3,0.31,NA,NA,NA,NA,NA,NA,"stop","C6A F17K Y39F L60S S69G K94*",6
"lib2","SARS-CoV-2","TACTTAACCAAACCCC",15,0.46,NA,NA,NA,NA,NA,NA,"stop","L38T S53M L95* F134S",4
"lib2","SARS-CoV-2","TACTTAACCACTAAAC",10,112.47,10.91,0.07,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TACTTAAGATGCTAGG",5,180.92,10.73,-0.1,0.03,2.95,1.05,0,"1 nonsynonymous","T63Y",1
"lib2","SARS-CoV-2","TACTTAAGATTCATGG",7,32.65,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","R16N P54Q V71R K87S L162R",5
"lib2","SARS-CoV-2","TACTTAAGCAAGCGAT",5,35.2,6.16,-4.67,0.69,3,1.33,0.02,">1 nonsynonymous","K94P F134Y E186S",3
"lib2","SARS-CoV-2","TACTTAAGGATGACCG",15,150.58,8.87,-1.96,0.14,1.54,1.12,0.01,">1 nonsynonymous","A33V D59K Y66S A89G T201M",5
"lib2","SARS-CoV-2","TACTTAAGGGCTATGG",4,46.38,9.2,-1.64,0.13,1.76,1.05,0.01,">1 nonsynonymous","Y66F Q79A S139D",3
"lib2","SARS-CoV-2","TACTTAATGTCATCAA",3,20.21,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","I2N A14D Y93I G117M L131V",5
"lib2","SARS-CoV-2","TACTTAATGTGATCTT",2,14.17,6,-4.84,2,3,1.49,0.03,">1 nonsynonymous","A42R Q84M A89Q I104Q Y165F S184Y",6
"lib2","SARS-CoV-2","TACTTAATTGAACTAT",2,33.62,11.03,0.19,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTACAAATAGAAA",4,70.69,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","V32S G146L Y175L",3
"lib2","SARS-CoV-2","TACTTACAATAAAATG",4,42.96,9.09,-1.74,0.07,2.02,1.07,0,">1 nonsynonymous","F44A Y121K",2
"lib2","SARS-CoV-2","TACTTACACAGTGCTG",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21S T63F K87S K114L F156A G174M",6
"lib2","SARS-CoV-2","TACTTACATTCCTTAT",21,6.99,NA,NA,NA,NA,NA,0.14,"1 nonsynonymous","G172T",1
"lib2","SARS-CoV-2","TACTTACCTCATAACG",5,116.67,10.84,0,0.05,2.91,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TACTTACGACACAACC",5,139.33,6.1,-4.73,0.49,1.5,1.13,0.01,">1 nonsynonymous","C158V P197D",2
"lib2","SARS-CoV-2","TACTTACGGTTGTGAA",4,118.57,8.25,-2.59,0.11,2.5,1.06,0.01,">1 nonsynonymous","N157T G174T",2
"lib2","SARS-CoV-2","TACTTACTCTAAAAAT",12,249.27,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","R73Q G83D Y159R",3
"lib2","SARS-CoV-2","TACTTAGAGTACTCAC",8,42.89,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","C6H D90P A105F",3
"lib2","SARS-CoV-2","TACTTAGCCAGCTGCA",6,19.74,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S36M V77R L125P S129N P177A L183D",6
"lib2","SARS-CoV-2","TACTTAGTAAAACTTC",1,39.69,9.15,-1.69,0.04,2.98,1.08,0,">1 nonsynonymous","C61S G117T",2
"lib2","SARS-CoV-2","TACTTATAAAGATTCT",1,5.74,9.46,-1.38,0.16,2.35,1,0.01,">1 nonsynonymous","A22G G74Q S200E",3
"lib2","SARS-CoV-2","TACTTATAAGAGTTCA",17,69.33,6,-4.84,2,3,1.2,0,">1 nonsynonymous","G9N T15V N92I N107L G174I",5
"lib2","SARS-CoV-2","TACTTATAAGTTGATA",9,3.96,NA,NA,NA,NA,NA,NA,"stop","D59* V181M",2
"lib2","SARS-CoV-2","TACTTATAGGTAAAAT",6,16.76,NA,NA,NA,NA,NA,NA,"stop","K26E K56R D97N N120D L183*",5
"lib2","SARS-CoV-2","TACTTATAGTTCGAAC",2,59.67,10.92,0.09,0.1,2.91,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTATATAGAGAGC",6,42.3,9.02,-1.82,0.1,1.69,1.03,0,">1 nonsynonymous","C61V P82M",2
"lib2","SARS-CoV-2","TACTTATCATATGAGA",4,83.4,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y143R G172N",2
"lib2","SARS-CoV-2","TACTTATCTACGATGA",10,117.59,10.4,-0.44,0.06,2.83,1.13,0,">1 nonsynonymous","N24Q K87L K199S",3
"lib2","SARS-CoV-2","TACTTATGATACCGGA",13,82.7,6,-4.84,2,1.5,1.19,0,">1 nonsynonymous","Y35D A42T K56G K94Y R124S P161L",6
"lib2","SARS-CoV-2","TACTTATGCACCCAAG",11,109.67,10.68,-0.16,0.04,2.9,1.13,0,">1 nonsynonymous","C61D N130H",2
"lib2","SARS-CoV-2","TACTTATGCCGTCCTA",3,59.39,10.86,0.03,0.07,2.9,1.12,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","TACTTATGCTATCGAT",4,56.94,10.66,-0.17,0.07,2.86,1.04,0,">1 nonsynonymous","K48H D97H",2
"lib2","SARS-CoV-2","TACTTATGGCATCCCT",3,42.69,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C61K D137S Y165H",3
"lib2","SARS-CoV-2","TACTTATTCATTTACT",1,0.83,NA,NA,NA,NA,NA,NA,"stop","G9K K56* I72F G116V G166C",5
"lib2","SARS-CoV-2","TACTTATTCGATAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S45* Y119R A190D",3
"lib2","SARS-CoV-2","TACTTATTTGGGCGAA",3,21.69,NA,NA,NA,NA,NA,NA,"stop","I2W C61* Y143Q C158Y",4
"lib2","SARS-CoV-2","TACTTATTTTGTCAGA",3,17.61,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","I28M F167R",2
"lib2","SARS-CoV-2","TACTTCAAATTAAAAC",1,43.78,10.82,-0.02,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTCAAGAGACTAT",15,183.82,10.85,0.01,0.03,2.95,1.07,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","TACTTCAATAGGAGTT",3,81.1,8.48,-2.36,0.16,1.93,1.16,0.01,">1 nonsynonymous","F62N Q176S",2
"lib2","SARS-CoV-2","TACTTCACCAAAGGGA",8,0.32,NA,NA,NA,NA,NA,NA,"stop","Y91* D98S G174*",3
"lib2","SARS-CoV-2","TACTTCACCCCTAGAC",1,29.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A33E P82G A89T C158R",4
"lib2","SARS-CoV-2","TACTTCAGATCGAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S I28V F44Q D97T",4
"lib2","SARS-CoV-2","TACTTCAGATGCATAC",3,29.38,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","D68P P96K",2
"lib2","SARS-CoV-2","TACTTCCACTCACAAA",18,114.29,7.13,-3.71,0.35,1.5,1.13,0.03,">1 nonsynonymous","D34S N92A",2
"lib2","SARS-CoV-2","TACTTCCATCCACTTA",4,43.21,6,-4.84,1.64,1.5,1.15,0.01,">1 nonsynonymous","Y35K L57N Y123N P149L",4
"lib2","SARS-CoV-2","TACTTCCCATGGAGTA",2,18.21,7.86,-2.98,0.29,1.5,1.04,0.03,">1 nonsynonymous","D68V N120R F134W",3
"lib2","SARS-CoV-2","TACTTCGAAAATGTGA",5,10.17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P96T Q176L",2
"lib2","SARS-CoV-2","TACTTCGACAATTAGC",7,127.98,9.8,-1.03,0.06,2.3,1.04,0,">1 nonsynonymous","I2L C61A I104S",3
"lib2","SARS-CoV-2","TACTTCGGGCACTGAC",5,59.95,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","P82N F99N G116V S147Y",4
"lib2","SARS-CoV-2","TACTTCGTCACTGACA",3,82.52,8.71,-2.13,0.08,1.9,1.11,0,">1 nonsynonymous","N4H S53L D112L",3
"lib2","SARS-CoV-2","TACTTCTAACAACATA",2,30.34,8.34,-2.49,0.42,1.5,1,0.06,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","TACTTCTATATTGACC",2,103.54,10.5,-0.34,0.05,2.96,1.03,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TACTTCTCTACGCTTA",9,239.74,10.42,-0.42,0.05,2.93,1.06,0,">1 nonsynonymous","Y121L L188P",2
"lib2","SARS-CoV-2","TACTTCTGCAACGAGT",11,69.39,9.44,-1.39,0.05,1.99,1.05,0,">1 nonsynonymous","P7I T55G D97K G152M",4
"lib2","SARS-CoV-2","TACTTCTTCTGAGACA",2,24.03,10.32,-0.52,0.07,2.84,1.14,0,"1 nonsynonymous","R136C",1
"lib2","SARS-CoV-2","TACTTGAAAACAAGAA",4,18.94,6,-4.84,2,1.5,1.33,0.07,">1 nonsynonymous","V115D K128P G146C Q176M",4
"lib2","SARS-CoV-2","TACTTGAAACTAGGAT",2,0.69,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","TACTTGAAAGAGTCCC",7,104.59,9.95,-0.89,0.07,2.31,1.03,0,">1 nonsynonymous","A22Q R127S",2
"lib2","SARS-CoV-2","TACTTGAAAGCCCAGT",2,67.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2G N13I R136S I142T",4
"lib2","SARS-CoV-2","TACTTGAACCACCCAC",1,14.41,9.73,-1.1,0.08,2.66,1.03,0.01,">1 nonsynonymous","V11Y R27L T148M",3
"lib2","SARS-CoV-2","TACTTGAACGCTAAAT",1,10.42,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V11Y K48G Y121M",3
"lib2","SARS-CoV-2","TACTTGAATGCCTGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","D59Y G86M K114E N130I T140*",5
"lib2","SARS-CoV-2","TACTTGACCCATGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib2","SARS-CoV-2","TACTTGATCTAATCCA",4,90.79,10.17,-0.66,0.03,3,1.03,0,">1 nonsynonymous","A81E L125G",2
"lib2","SARS-CoV-2","TACTTGCAGCGAATCT",8,138.45,10.77,-0.07,0.03,2.94,1.07,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","TACTTGCATAAGGAAC",10,133.29,10.61,-0.23,0.03,2.93,1.08,0,">1 nonsynonymous","N1A V173C T201V",3
"lib2","SARS-CoV-2","TACTTGCTGAACTTAT",3,79.91,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68K V115K",2
"lib2","SARS-CoV-2","TACTTGTACTTAGTCG",8,261.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D97N S113N L125M F185T",4
"lib2","SARS-CoV-2","TACTTGTGAACCCAGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","TACTTGTGGAACAAAA",15,155.88,8.71,-2.13,0.07,2.72,1.07,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","TACTTGTGGGTGCGTT",2,53.84,8.28,-2.55,0.12,1.94,1.03,0.01,">1 nonsynonymous","D90Q P161M",2
"lib2","SARS-CoV-2","TACTTGTTAAGCGGGT",9,212.69,10.77,-0.07,0.04,2.98,1.04,0,">1 nonsynonymous","L5R S43W",2
"lib2","SARS-CoV-2","TACTTGTTATACAATG",1,28.5,10.56,-0.27,0.05,2.83,1.02,0,">1 nonsynonymous","G83D T100F",2
"lib2","SARS-CoV-2","TACTTGTTGACTTCCA",15,206.41,10.82,-0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTTAAAACAGAAA",1,14.03,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y93K P161V T201V",3
"lib2","SARS-CoV-2","TACTTTAAAGCTTAAG",15,0.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V20M",1
"lib2","SARS-CoV-2","TACTTTAAAGTTATCA",4,10.36,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G9R L57Y D68T L95T E141C K199R",6
"lib2","SARS-CoV-2","TACTTTAAGAAAAGAA",1,21.03,10.59,-0.25,0.05,2.94,1.07,0,"1 nonsynonymous","N30R",1
"lib2","SARS-CoV-2","TACTTTAAGACAGCAA",2,6.75,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N13S P96S W106V",3
"lib2","SARS-CoV-2","TACTTTAATCCTAAAG",1,5.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F A14E S43D",3
"lib2","SARS-CoV-2","TACTTTAATTCGTAGT",7,148.78,10.6,-0.23,0.04,2.9,1.05,0,"1 nonsynonymous","Y21H",1
"lib2","SARS-CoV-2","TACTTTACACGCGACC",5,92.2,6.11,-4.73,0.37,1.5,1.08,0,">1 nonsynonymous","V11R A22G Y39K G116M R136I Q163V",6
"lib2","SARS-CoV-2","TACTTTAGACACGTCC",5,23.48,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","K87S K94L E135S V181E G196R",5
"lib2","SARS-CoV-2","TACTTTAGTCCAGTTG",1,38.51,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","S29T V103S N110E F126T",4
"lib2","SARS-CoV-2","TACTTTATAAATAAAC",9,0.13,NA,NA,NA,NA,NA,NA,"stop","W23* P82W",2
"lib2","SARS-CoV-2","TACTTTATACTCCGAT",2,36.85,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y93I D112P P177Y",3
"lib2","SARS-CoV-2","TACTTTATTATAAAAA",2,12.68,10.99,0.15,0.09,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTTATTCGTAATA",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29P D90N F99E",3
"lib2","SARS-CoV-2","TACTTTCAATTAATCA",9,1.95,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TACTTTCACAAGAGAC",1,31.36,10.98,0.14,0.05,2.98,1.03,0,">1 nonsynonymous","L5A V153K",2
"lib2","SARS-CoV-2","TACTTTCACAGCACGT",4,27.39,10.91,0.08,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTTCATCCATATA",2,10.26,9.69,-1.15,0.07,3,1.03,0.01,">1 nonsynonymous","L5W Q84T G146N",3
"lib2","SARS-CoV-2","TACTTTCGCCCTCAGC",1,7.52,10.93,0.09,0.09,3,1.01,0,"1 nonsynonymous","I2M",1
"lib2","SARS-CoV-2","TACTTTCGCCGTCCCA",1,17.39,10.74,-0.09,0.04,3,1,0,"1 nonsynonymous","L125F",1
"lib2","SARS-CoV-2","TACTTTCGGAAAATCT",2,249.05,9.4,-1.43,0.04,2.78,1.08,0,">1 nonsynonymous","I138L P177S",2
"lib2","SARS-CoV-2","TACTTTGAAACAAACA",5,115.14,9.32,-1.51,0.08,2.54,1.08,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TACTTTGAACAATGTG",2,17.52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A22V C158R",2
"lib2","SARS-CoV-2","TACTTTGAATTCCTCA",1,6.37,10.62,-0.21,0.11,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTTGAGACTACTA",1,24.07,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V52N A89F",2
"lib2","SARS-CoV-2","TACTTTGCAATAAAGG",10,56.7,10.65,-0.18,0.03,2.94,1.03,0,">1 nonsynonymous","Y39L D98N Y178S",3
"lib2","SARS-CoV-2","TACTTTGCACAATCAA",2,68.45,10.88,0.05,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TACTTTGCCCAATGGT",7,135.88,10.9,0.07,0.04,2.94,1.06,0,"1 nonsynonymous","N109R",1
"lib2","SARS-CoV-2","TACTTTGGTCTGCCTA",3,55.46,10.24,-0.6,0.04,2.92,1.01,0,">1 nonsynonymous","Y35L K87F F99W N120S G152M",5
"lib2","SARS-CoV-2","TACTTTGTATTTAGAT",5,28.6,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A14R Y21E S41D F62S G86M Y91G S129N S184F",8
"lib2","SARS-CoV-2","TACTTTTACAGGAAAC",8,99.03,9.61,-1.23,0.08,2.02,1.08,0,">1 nonsynonymous","F12Y G83Y",2
"lib2","SARS-CoV-2","TACTTTTCCTCGCCTT",9,193.05,9.54,-1.29,0.07,2.43,1.03,0,">1 nonsynonymous","Y123E N151Q",2
"lib2","SARS-CoV-2","TAGAAAAAAAGATACC",1,47.64,7,-3.84,0.19,2.07,1.13,0.01,">1 nonsynonymous","V77I N120Q Q168S Y175L",4
"lib2","SARS-CoV-2","TAGAAAAAACAAACGT",3,57.2,10.3,-0.54,0.03,2.95,1.06,0,">1 nonsynonymous","N4K F44L K48E",3
"lib2","SARS-CoV-2","TAGAAAAAACCTTTAC",3,23.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N4K T46S D98M G116F E141L C150G N157W Y165N",8
"lib2","SARS-CoV-2","TAGAAAAAATAGGGTA",1,48.52,10.86,0.02,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAAAAAATCTAAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N L122P T170Y",3
"lib2","SARS-CoV-2","TAGAAAAACGACTTAT",7,51.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Q G101S",2
"lib2","SARS-CoV-2","TAGAAAAATGAGCTAG",8,81.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17T N40Y Y123N A190V",4
"lib2","SARS-CoV-2","TAGAAAAATTATACTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25L A33T S45V A81T P96F S200V",6
"lib2","SARS-CoV-2","TAGAAAACCGCAGGAG",7,92.24,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5N D34K G83Y E141Y L162P",5
"lib2","SARS-CoV-2","TAGAAAACCTATACAG",3,33,10.18,-0.66,0.08,2.8,1.06,0,">1 nonsynonymous","C61S W106Y",2
"lib2","SARS-CoV-2","TAGAAAACCTTTCATA",2,0.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L D90L",2
"lib2","SARS-CoV-2","TAGAAAACGACCAGCA",4,144.37,10.69,-0.15,0.04,2.89,1.1,0,">1 nonsynonymous","L5M T63Y",2
"lib2","SARS-CoV-2","TAGAAAACGCTTATCG",9,195.82,9.81,-1.03,0.08,2.43,1.04,0,">1 nonsynonymous","A33R F134M",2
"lib2","SARS-CoV-2","TAGAAAACTGAGAAGT",4,29.22,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","R27G I104R G155F",3
"lib2","SARS-CoV-2","TAGAAAAGAAAAATGC",6,82.76,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","T55I G83I W106G",3
"lib2","SARS-CoV-2","TAGAAAAGCGAAAAAG",8,105.66,10.87,0.03,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAAAAGTGAACTAG",7,15.11,6.21,-4.62,0.67,1.5,1.22,0.02,">1 nonsynonymous","N40C L95Y",2
"lib2","SARS-CoV-2","TAGAAAATAACCGACT",1,11.12,8.27,-2.57,0.23,1.88,1.14,0.01,">1 nonsynonymous","F8D K56L T201E",3
"lib2","SARS-CoV-2","TAGAAAATAAGGTATT",4,122.19,10.56,-0.28,0.03,2.94,1.05,0,">1 nonsynonymous","N30K S200F",2
"lib2","SARS-CoV-2","TAGAAAATCAGTGTGA",1,4.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71K S139R P169K",3
"lib2","SARS-CoV-2","TAGAAAATGATTAAGG",6,87.09,10.87,0.03,0.05,2.94,1.06,0,"1 nonsynonymous","N130A",1
"lib2","SARS-CoV-2","TAGAAAATGCATAGTA",2,39.17,9.86,-0.97,0.05,2.4,1,0,">1 nonsynonymous","C6N T100S",2
"lib2","SARS-CoV-2","TAGAAAATGTGCATAA",5,37.72,10.99,0.15,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAAAATTCCCGGTT",3,18.31,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A22D S45G N64L Q144L T201R",5
"lib2","SARS-CoV-2","TAGAAAATTGCATTAT",1,11.11,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","G86E Y93S G101D Y165T",4
"lib2","SARS-CoV-2","TAGAAAATTTGAGATT",3,36.38,10.78,-0.05,0.04,2.99,1.01,0,">1 nonsynonymous","T3S K56G",2
"lib2","SARS-CoV-2","TAGAAACAAAAAAATC",1,10.06,8.17,-2.66,0.21,1.69,1.05,0.01,">1 nonsynonymous","G9R P82L",2
"lib2","SARS-CoV-2","TAGAAACAAGCAATAA",9,4.91,NA,NA,NA,NA,NA,NA,"stop","I2F W23* T55G D112R D137R F160V",6
"lib2","SARS-CoV-2","TAGAAACACATATTGG",6,78.41,10.14,-0.7,0.05,2.64,1.03,0,">1 nonsynonymous","G9F V20A S45D N130S",4
"lib2","SARS-CoV-2","TAGAAACACGCCATTG",3,6.48,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","W106R N120P Y159G",3
"lib2","SARS-CoV-2","TAGAAACACTAAATAT",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136I N151A L183V",3
"lib2","SARS-CoV-2","TAGAAACAGATTCGCG",18,95.23,6.38,-4.45,0.45,1.5,1.14,0.02,">1 nonsynonymous","F8L V181D",2
"lib2","SARS-CoV-2","TAGAAACATCAACTAA",6,95.54,10.5,-0.34,0.04,2.9,1.1,0,">1 nonsynonymous","V115T N130E N151F",3
"lib2","SARS-CoV-2","TAGAAACATTATGTTA",10,64.38,7.04,-3.8,0.23,1.5,1.17,0.01,">1 nonsynonymous","K132F Y165K",2
"lib2","SARS-CoV-2","TAGAAACCAAGAATAA",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R S41N T46S Y121A E186P T201R",6
"lib2","SARS-CoV-2","TAGAAACCAATTTCGC",7,180.37,10.28,-0.56,0.06,2.74,1.02,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","TAGAAACCATTTCTTT",6,71.67,10.8,-0.03,0.05,2.9,1.11,0,">1 nonsynonymous","N4S K199L",2
"lib2","SARS-CoV-2","TAGAAACCTCCAAAGA",4,29.89,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A89C L95F T201A",3
"lib2","SARS-CoV-2","TAGAAACCTTGGAATT",5,0.86,NA,NA,NA,NA,NA,NA,"stop","G9A A18G L38G L125* E141Q",5
"lib2","SARS-CoV-2","TAGAAACGAAATACAT",6,31.37,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","L5R F17S C61V N92L",4
"lib2","SARS-CoV-2","TAGAAACGAGCGGAAT",2,19.26,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N1A F44R R73I W106E P161M",5
"lib2","SARS-CoV-2","TAGAAACGAGTCCATT",4,167.43,10.68,-0.16,0.03,2.99,1.01,0,">1 nonsynonymous","A14S S184N",2
"lib2","SARS-CoV-2","TAGAAACGATGCAACC",2,16.51,10.84,0.01,0.08,2.82,1.21,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGAAACGCAAGGTTG",12,72.76,9.66,-1.18,0.13,2,1.07,0.01,">1 nonsynonymous","S19L L122A",2
"lib2","SARS-CoV-2","TAGAAACGCCAGGGAA",4,47.68,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A18E R25C K87D Y159T",4
"lib2","SARS-CoV-2","TAGAAACGCCAGTACG",7,56.22,6.26,-4.58,0.69,1.5,1.21,0.03,">1 nonsynonymous","V11M S36L R73T I88W",4
"lib2","SARS-CoV-2","TAGAAACGCGCAGACA",8,64.87,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D75Y L125P G146C",3
"lib2","SARS-CoV-2","TAGAAACGCTAACAAA",4,171.42,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L122F V181G T201M",3
"lib2","SARS-CoV-2","TAGAAACGGCACTTAC",2,22.99,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I2L K132F Q144D Y165A R179W",5
"lib2","SARS-CoV-2","TAGAAACGGCATGAAT",11,180.9,9.12,-1.72,0.08,2.53,1.07,0,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","TAGAAACGGTCATAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L A33L Q144L",3
"lib2","SARS-CoV-2","TAGAAACTAAAAGAAA",4,8.34,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","F12S C49L L60Y",3
"lib2","SARS-CoV-2","TAGAAACTCCCCCGGC",2,3.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","TAGAAACTGACATCAG",9,25.06,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y91F V182E",2
"lib2","SARS-CoV-2","TAGAAAGACGTTTGTA",2,15.26,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E141S P149T P161L A190E T201G",5
"lib2","SARS-CoV-2","TAGAAAGCAAGTAGCG",5,108.29,9.77,-1.07,0.07,1.98,1.04,0,">1 nonsynonymous","N4E V11E N130E",3
"lib2","SARS-CoV-2","TAGAAAGCGAATTAAA",6,72.17,6,-4.84,2,3,1.23,0,">1 nonsynonymous","D98L V115S A145D Y178T",4
"lib2","SARS-CoV-2","TAGAAAGGAATGACCC",3,27.52,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","S41A F47N V77E",3
"lib2","SARS-CoV-2","TAGAAAGGATGACTGA",3,17.23,6,-4.84,2,3,1.03,0,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","TAGAAAGGGTTAAGAC",3,22.33,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F12N V37Q G51L",3
"lib2","SARS-CoV-2","TAGAAAGGTACTCAAC",5,46.68,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6I D90S F99C W106V K114L",5
"lib2","SARS-CoV-2","TAGAAAGTAACTAAAG",13,47.04,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","Q79V K87L G101H T148R Y159T",5
"lib2","SARS-CoV-2","TAGAAAGTCTTAGCTT",3,22.53,10.57,-0.26,0.11,2.86,1.16,0.01,">1 nonsynonymous","N24K E141Y",2
"lib2","SARS-CoV-2","TAGAAAGTGCAACCAA",3,47.88,10.71,-0.12,0.06,2.9,1.12,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","TAGAAAGTGTTTAAAT",5,114.75,10.2,-0.64,0.03,2.92,1,0,">1 nonsynonymous","C31E A42L",2
"lib2","SARS-CoV-2","TAGAAATAACAATAAA",6,12.42,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I2C R124W S139T V173Q T201I",5
"lib2","SARS-CoV-2","TAGAAATAACTCCGGT",7,581.55,10.82,-0.02,0.03,2.97,1.04,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","TAGAAATAATGATCGA",3,8.62,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C6W S19Y F134I G152I",4
"lib2","SARS-CoV-2","TAGAAATAGAAAAATA",7,38.29,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F62Y G86E C102L F134K",4
"lib2","SARS-CoV-2","TAGAAATATGACAAAA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","I28C Y91S Q176*",3
"lib2","SARS-CoV-2","TAGAAATATTTAGAGA",1,24.18,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G117P Y143D",2
"lib2","SARS-CoV-2","TAGAAATCATCCCAAC",1,26.45,10.89,0.05,0.06,2.93,1.08,0,"1 nonsynonymous","K199M",1
"lib2","SARS-CoV-2","TAGAAATCCCTATACA",23,160.99,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F70M Y91P P133V F167L",4
"lib2","SARS-CoV-2","TAGAAATGAGTCCGGA",6,10.73,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N13Y I104V K128V I142R F185N",5
"lib2","SARS-CoV-2","TAGAAATTAAACACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66V A89W N118I N130T I138* G172I",6
"lib2","SARS-CoV-2","TAGAAATTATTACGAA",3,61.03,10.79,-0.04,0.03,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAAATTCATACACA",2,11.38,6,-4.84,0.61,1.5,1.03,0,">1 nonsynonymous","A14S Y21R D90F P191S",4
"lib2","SARS-CoV-2","TAGAAATTCCTAGAAC",4,36.85,10.79,-0.04,0.05,2.97,1.06,0,">1 nonsynonymous","G146S F160W",2
"lib2","SARS-CoV-2","TAGAAATTCTATCCGG",1,57.21,8.37,-2.46,0.11,2.67,1.03,0,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","TAGAAATTTACTTATC",5,30.5,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V20G D34P P96L Y119Q T148M",5
"lib2","SARS-CoV-2","TAGAACAAACGTTCCT",14,92.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25F A67N K87V E141I",4
"lib2","SARS-CoV-2","TAGAACAAATCTATAG",1,56.18,9.97,-0.86,0.1,2.5,1.06,0,"1 nonsynonymous","I80M",1
"lib2","SARS-CoV-2","TAGAACAACTAAGAGT",1,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y Y119L D137L",3
"lib2","SARS-CoV-2","TAGAACAAGACAAAAT",14,3.03,NA,NA,NA,NA,NA,NA,"stop","K94Q G174Q T201*",3
"lib2","SARS-CoV-2","TAGAACAAGCCCAATT",1,51.35,10.65,-0.19,0.04,2.98,1.04,0,"1 nonsynonymous","P7C",1
"lib2","SARS-CoV-2","TAGAACACAGGTAGGA",16,146.4,10.82,-0.02,0.05,2.93,1.08,0,">1 nonsynonymous","L122R I138L",2
"lib2","SARS-CoV-2","TAGAACACATACACCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TAGAACACCATATCTA",1,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P D98Y C102S",3
"lib2","SARS-CoV-2","TAGAACACCTAATATA",2,60.04,9.63,-1.2,0.05,2.91,1.04,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","TAGAACAGACCAAAAT",3,13.14,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61L G86L P96F P149V",4
"lib2","SARS-CoV-2","TAGAACAGACCACGCA",3,2.32,NA,NA,NA,NA,NA,NA,"stop","C61* D90* D97T T140Y",4
"lib2","SARS-CoV-2","TAGAACAGATAACACG",1,86.22,8.26,-2.58,0.17,2.31,1.12,0.01,">1 nonsynonymous","I28L Y66T S113E",3
"lib2","SARS-CoV-2","TAGAACAGTGAAAATC",5,18.43,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","S41W S108P I142Y",3
"lib2","SARS-CoV-2","TAGAACATAATTCTAA",7,12.19,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S45L T148Y Y159R R179I",4
"lib2","SARS-CoV-2","TAGAACATACTCTAGG",7,25.88,8.41,-2.43,0.11,2.16,1.01,0.01,">1 nonsynonymous","I2V T55S G117S F134A G196V",5
"lib2","SARS-CoV-2","TAGAACATCTTAAATC",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C E186V",2
"lib2","SARS-CoV-2","TAGAACATGAAAGAAC",8,110.6,10.5,-0.34,0.03,2.94,1.08,0,"1 nonsynonymous","N30F",1
"lib2","SARS-CoV-2","TAGAACATTAGGGGCC",6,34.69,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S53A F99A L131F",3
"lib2","SARS-CoV-2","TAGAACCAACATGAAA",1,0.42,NA,NA,NA,NA,NA,NA,"stop","Y178* V182S",2
"lib2","SARS-CoV-2","TAGAACCAATGGTGTC",5,30.92,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2M G9K A81I D112H Y178S",5
"lib2","SARS-CoV-2","TAGAACCATTGCGGTT",5,194.32,9.91,-0.92,0.04,2.8,1.07,0,">1 nonsynonymous","N1R Q168T T201L",3
"lib2","SARS-CoV-2","TAGAACCCGTTCTAGT",6,71.87,10.16,-0.67,0.05,2.9,1.08,0,">1 nonsynonymous","A42P E76W",2
"lib2","SARS-CoV-2","TAGAACCCTATAGTGG",25,1114.69,8.88,-1.95,0.05,2.95,1.09,0,">1 nonsynonymous","N110E Y119C",2
"lib2","SARS-CoV-2","TAGAACCTGCCATAGC",3,29.88,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F62T Q84Y A89Y",3
"lib2","SARS-CoV-2","TAGAACCTGGTTTGAC",3,0.29,NA,NA,NA,NA,NA,NA,"stop","Y91* L122S Q144M E154S",4
"lib2","SARS-CoV-2","TAGAACCTTAAAAAAA",15,86.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R25L Y121S V173A V180Q",4
"lib2","SARS-CoV-2","TAGAACCTTTACACTA",8,96.72,10.9,0.07,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGAACGAAACTTACC",9,64.37,6.3,-4.53,0.42,1.5,1.12,0.01,"1 nonsynonymous","R124T",1
"lib2","SARS-CoV-2","TAGAACGAATTAATCT",2,0.74,NA,NA,NA,NA,NA,NA,"stop","A89N T100P Y121* L187K",4
"lib2","SARS-CoV-2","TAGAACGACCTATGCT",20,100.11,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A81L T85R L95C K114P",4
"lib2","SARS-CoV-2","TAGAACGCCCTGATAC",3,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y L95V S200I",3
"lib2","SARS-CoV-2","TAGAACGCTCTACCAC",4,19.76,NA,NA,NA,NA,NA,0.1,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","TAGAACGTATCAACAG",1,26.87,10.88,0.04,0.06,2.93,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGAACGTCAAACAAT",3,35.37,10.72,-0.11,0.07,2.89,1.08,0,">1 nonsynonymous","Y39F D59S L122V",3
"lib2","SARS-CoV-2","TAGAACGTCTGCCCGA",4,25.58,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","V52F G86D C102S",3
"lib2","SARS-CoV-2","TAGAACTAATACCAAG",8,108.26,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V52Y L131P T170L",3
"lib2","SARS-CoV-2","TAGAACTACGCCATCG",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C T63A G83V T201I",4
"lib2","SARS-CoV-2","TAGAACTATCCACGGG",3,31.59,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S113W P149H L183Y",3
"lib2","SARS-CoV-2","TAGAACTATTCGACAT",9,87.79,10.76,-0.08,0.03,2.94,1.07,0,">1 nonsynonymous","D90R T201S",2
"lib2","SARS-CoV-2","TAGAACTCAGAGAAAG",1,6.94,6.45,-4.38,0.7,1.5,1.09,0.04,">1 nonsynonymous","N107C E141F P149S T170P",4
"lib2","SARS-CoV-2","TAGAACTCATCACACG",7,6.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H S69R A89S P96L V115K",5
"lib2","SARS-CoV-2","TAGAACTCCGACTATT",6,78.62,10.82,-0.02,0.06,2.92,1.1,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","TAGAACTCGCGACCGT",11,206.21,10.56,-0.27,0.03,2.95,1.06,0,">1 nonsynonymous","T55K V115G",2
"lib2","SARS-CoV-2","TAGAACTCGTGAGTCC",1,17.47,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V37R W106A N118S N130I R136S P177L",6
"lib2","SARS-CoV-2","TAGAACTTCAGTGCCA",1,22.73,10.68,-0.16,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAACTTCCTCCGAA",3,30.39,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","Y119K I142S P161N",3
"lib2","SARS-CoV-2","TAGAACTTTAATAACA",1,29.39,10.13,-0.71,0.14,2.56,1,0.01,">1 nonsynonymous","R136F S200M",2
"lib2","SARS-CoV-2","TAGAACTTTGTTTCCT",10,90.13,10.62,-0.22,0.04,2.95,1.02,0,"1 nonsynonymous","T46A",1
"lib2","SARS-CoV-2","TAGAAGAAAGGAACGG",5,42.56,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I28M N64Y R73M D90S F167T",5
"lib2","SARS-CoV-2","TAGAAGAACCGACAAA",5,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55Q Y91G F167V",3
"lib2","SARS-CoV-2","TAGAAGACCATAACAC",15,174.19,9.56,-1.28,0.05,1.88,1.07,0,">1 nonsynonymous","D75S L95T",2
"lib2","SARS-CoV-2","TAGAAGAGTAATGATA",1,88.46,10.33,-0.5,0.05,2.82,1,0,">1 nonsynonymous","S43A Y91K E154S",3
"lib2","SARS-CoV-2","TAGAAGAGTCAGAACC",2,0.83,NA,NA,NA,NA,NA,NA,"stop","R27S F47G D68G D112*",4
"lib2","SARS-CoV-2","TAGAAGATACCTTATA",2,32.48,8.39,-2.44,0.19,1.78,1.16,0.02,">1 nonsynonymous","Q84W Q144L",2
"lib2","SARS-CoV-2","TAGAAGATATTTAATA",5,57.05,10.28,-0.56,0.04,2.87,1.08,0,">1 nonsynonymous","N40H L60I D90A T201M",4
"lib2","SARS-CoV-2","TAGAAGATCATTATTG",9,35.89,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C6N C61L Y93I A105S",4
"lib2","SARS-CoV-2","TAGAAGATGCTCGTAG",18,191.07,9.77,-1.07,0.06,2.53,1.06,0,">1 nonsynonymous","T3N G9C A33V F47V T55V N120H",6
"lib2","SARS-CoV-2","TAGAAGCACAAGAATA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","V20L T55* N64R",3
"lib2","SARS-CoV-2","TAGAAGCACCGTAAGG",21,445.47,10.57,-0.26,0.04,2.87,1.07,0,">1 nonsynonymous","N64M D90N G152D",3
"lib2","SARS-CoV-2","TAGAAGCACTCCACCA",3,19.84,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","R25A L60H P133S P161R F185Y",5
"lib2","SARS-CoV-2","TAGAAGCATAATTCTA",21,254.59,10.71,-0.13,0.03,2.95,1.04,0,">1 nonsynonymous","S43L N109A",2
"lib2","SARS-CoV-2","TAGAAGCATTTTTGTA",2,23.34,8.63,-2.21,0.15,1.91,1.06,0.01,">1 nonsynonymous","L60C D97I G146Y G174S",4
"lib2","SARS-CoV-2","TAGAAGCCCCTCGAAA",10,4.64,NA,NA,NA,NA,NA,NA,"stop","I142*",1
"lib2","SARS-CoV-2","TAGAAGCCCTTTCGAA",5,92.3,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S41L L60A N120A Y143S T148G Y175G",6
"lib2","SARS-CoV-2","TAGAAGCGCCAAACAT",6,45.33,9.02,-1.82,0.11,1.77,1.11,0.01,">1 nonsynonymous","F44K D90R T140A F160G L188R",5
"lib2","SARS-CoV-2","TAGAAGCGCCACCCAT",3,22,6.14,-4.7,1.22,1.5,1.2,0.03,">1 nonsynonymous","Y50D T148L",2
"lib2","SARS-CoV-2","TAGAAGCTAATCTACA",12,49.49,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","A14V D98A V103M",3
"lib2","SARS-CoV-2","TAGAAGCTCGACCTCG",18,110.01,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I80K D90W",2
"lib2","SARS-CoV-2","TAGAAGGACTTAAATT",4,112.97,10.83,-0.01,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAAGTAACCGGATA",1,39.33,10.32,-0.51,0.09,3,1,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","TAGAAGTAACTAAAAG",4,107.91,7.14,-3.7,0.23,1.78,1.14,0.01,">1 nonsynonymous","L5H Q84M L125K G155V",4
"lib2","SARS-CoV-2","TAGAAGTAGAACATGA",10,415.19,8.47,-2.37,0.1,2.97,1.04,0,">1 nonsynonymous","I138E Y175Q S200L",3
"lib2","SARS-CoV-2","TAGAAGTATCACACAT",1,9.5,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N4V R16S K94S A105N P169S G174D",6
"lib2","SARS-CoV-2","TAGAAGTGAATCATGG",7,84.43,10.7,-0.14,0.05,2.98,1.06,0,"1 nonsynonymous","G196D",1
"lib2","SARS-CoV-2","TAGAAGTGCTATCAAA",10,308.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K94S P177H P197L",3
"lib2","SARS-CoV-2","TAGAAGTTATGATATT",3,16.38,8.94,-1.89,0.23,1.5,1.02,0.05,">1 nonsynonymous","D59K S184P",2
"lib2","SARS-CoV-2","TAGAAGTTCAAAACCC",1,24.9,10.63,-0.21,0.07,2.86,1.11,0,">1 nonsynonymous","K114S L122T K128I",3
"lib2","SARS-CoV-2","TAGAATAAAAACTATA",8,10.03,NA,NA,NA,NA,NA,NA,"stop","S45L Y66* T201S",3
"lib2","SARS-CoV-2","TAGAATAAAGTTAGAA",1,67.43,10.66,-0.18,0.05,2.88,1.13,0,">1 nonsynonymous","N40Y T46Y",2
"lib2","SARS-CoV-2","TAGAATAAATTTACAG",9,1.96,NA,NA,NA,NA,NA,NA,"stop","G9S N30R L38I G83E P149K F167*",6
"lib2","SARS-CoV-2","TAGAATAACTCCCAGT",3,37.72,10.17,-0.67,0.08,2.74,1.02,0,">1 nonsynonymous","S45Y T63L",2
"lib2","SARS-CoV-2","TAGAATAATGAAAATA",6,20.73,6,-4.84,2,1.5,1.14,0.03,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","TAGAATAATTAGTTTG",4,33.8,10.87,0.04,0.06,3,1.02,0,">1 nonsynonymous","I2N K128H K199H",3
"lib2","SARS-CoV-2","TAGAATACCAAGTATC",4,0.16,NA,NA,NA,NA,NA,NA,"stop","T46S D59G W106* N120I A145T",5
"lib2","SARS-CoV-2","TAGAATACGGCGATGG",8,109.67,9.65,-1.19,0.05,2.31,1.02,0,">1 nonsynonymous","N64A A81N G116M V173K",4
"lib2","SARS-CoV-2","TAGAATACTTATACTA",2,12.35,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N92L F185N",2
"lib2","SARS-CoV-2","TAGAATAGACCTTGGA",5,24.32,10.28,-0.56,0.12,2.86,1.03,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TAGAATATAAATAATC",5,81.05,9.21,-1.63,0.08,2.23,1.11,0,">1 nonsynonymous","G9L S43D Y123E",3
"lib2","SARS-CoV-2","TAGAATATACCAAAAC",4,18.34,6.2,-4.63,0.65,2.06,1.23,0.01,">1 nonsynonymous","L60M G86K D98F S164H",4
"lib2","SARS-CoV-2","TAGAATATATATTCAG",4,26.36,9.58,-1.25,0.1,2.92,1.08,0,">1 nonsynonymous","F160W T170R P197A",3
"lib2","SARS-CoV-2","TAGAATATCATCCCTT",8,93.77,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9W S69C F99C N120T",4
"lib2","SARS-CoV-2","TAGAATATGAAACTTT",2,70.62,10.58,-0.26,0.14,2.73,1.15,0.01,">1 nonsynonymous","K48R T55N",2
"lib2","SARS-CoV-2","TAGAATATTAGTCATG",2,36.87,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T3D T15Q S43K C150Y Y159F",5
"lib2","SARS-CoV-2","TAGAATATTGTTACAC",1,11.47,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","I28R Y93I E141R",3
"lib2","SARS-CoV-2","TAGAATCAATTTTGAC",1,39.73,10.8,-0.04,0.05,2.99,1.02,0,"1 nonsynonymous","T85G",1
"lib2","SARS-CoV-2","TAGAATCACCTGTCCA",2,15.21,10.81,-0.03,0.07,3,1,0,"1 nonsynonymous","H189R",1
"lib2","SARS-CoV-2","TAGAATCAGATACAAG",2,10.03,6,-4.84,0.65,3,1.03,0,">1 nonsynonymous","Y21R D90F",2
"lib2","SARS-CoV-2","TAGAATCAGGCTGTTG",2,35.98,8.02,-2.82,0.2,2.29,1.04,0.01,"1 nonsynonymous","C158A",1
"lib2","SARS-CoV-2","TAGAATCATATTCGAG",3,0.77,NA,NA,NA,NA,NA,NA,"stop","F12*",1
"lib2","SARS-CoV-2","TAGAATCCAACAAATT",6,84.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6F R124C",2
"lib2","SARS-CoV-2","TAGAATCCGTCAATAG",14,202.28,10.7,-0.14,0.05,2.94,1.08,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","TAGAATCGAGATGACG",2,2.24,NA,NA,NA,NA,NA,NA,"stop","A14* Y50P T201K",3
"lib2","SARS-CoV-2","TAGAATCGTGCTCGCT",2,9.66,11.09,0.26,0.06,2.92,1.1,0,">1 nonsynonymous","V65M P197L",2
"lib2","SARS-CoV-2","TAGAATCTACGAGCAT",5,45.33,10.33,-0.51,0.06,2.94,1.08,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TAGAATGAAAATATTA",19,219,10.26,-0.58,0.03,2.88,1.05,0,">1 nonsynonymous","E10S V32K S43V F62V",4
"lib2","SARS-CoV-2","TAGAATGACGCAGCGA",5,0.78,NA,NA,NA,NA,NA,NA,"stop","S43R S113C Q176*",3
"lib2","SARS-CoV-2","TAGAATGATTGATGGG",2,43.85,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","T3G T63P G86V A190S",4
"lib2","SARS-CoV-2","TAGAATGGAGACTATG",5,3,NA,NA,NA,NA,NA,NA,"stop","K114* L131C Y178D",3
"lib2","SARS-CoV-2","TAGAATGTAAAATTAC",5,0.02,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAGAATGTAGCCCTTT",9,4.09,NA,NA,NA,NA,NA,NA,"stop","I2* F99N",2
"lib2","SARS-CoV-2","TAGAATGTCAAAATAC",2,4.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82Q I88C L95V",3
"lib2","SARS-CoV-2","TAGAATTAAAGCATCA",2,27.11,9.7,-1.13,0.12,2.55,1.09,0.01,">1 nonsynonymous","Y91R F156I",2
"lib2","SARS-CoV-2","TAGAATTACACTAATC",10,147.38,10.36,-0.48,0.03,2.87,1.07,0,">1 nonsynonymous","N40T T46I P149H",3
"lib2","SARS-CoV-2","TAGAATTACTGAATCA",3,21.69,9.16,-1.68,0.1,2.46,1.01,0.01,">1 nonsynonymous","A33S Y121S",2
"lib2","SARS-CoV-2","TAGAATTATGGCGAAT",4,73.26,10.66,-0.17,0.05,2.94,1.06,0,">1 nonsynonymous","P54L T63G T100L",3
"lib2","SARS-CoV-2","TAGAATTATTACCAAC",4,8.74,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F62D P82Q",2
"lib2","SARS-CoV-2","TAGAATTCACTCCGTG",5,3.43,NA,NA,NA,NA,NA,NA,"stop","T55* K128E P133R",3
"lib2","SARS-CoV-2","TAGAATTCCCGATAAA",4,66.6,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N92V G155M",2
"lib2","SARS-CoV-2","TAGAATTGAACGCCGA",3,76.99,10.86,0.03,0.06,2.94,1.05,0,">1 nonsynonymous","D59K A192M",2
"lib2","SARS-CoV-2","TAGAATTGATCTAGAC",10,126.88,6.38,-4.46,0.32,1.5,1.1,0.01,">1 nonsynonymous","G9T V37L N58A S113D",4
"lib2","SARS-CoV-2","TAGAATTGCCCACCAC",6,61.75,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","D90F G101Y",2
"lib2","SARS-CoV-2","TAGAATTTACTCTCGA",5,0.23,NA,NA,NA,NA,NA,NA,"stop","N107* L125T",2
"lib2","SARS-CoV-2","TAGAATTTAGTCTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","T63Q S69* K87L D112G Y119H T148S",6
"lib2","SARS-CoV-2","TAGAATTTATACAAAA",8,123.57,9.36,-1.47,0.04,2.65,1.05,0,">1 nonsynonymous","G152V G174R",2
"lib2","SARS-CoV-2","TAGACAAAATCAAGAA",1,0.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44R G74L",2
"lib2","SARS-CoV-2","TAGACAAACAACACAA",6,183.63,10.44,-0.39,0.03,2.98,1.02,0,">1 nonsynonymous","P7H F44W L60V P149L",4
"lib2","SARS-CoV-2","TAGACAAACATTAGTA",3,28.47,9.37,-1.46,0.17,1.65,1.15,0.01,">1 nonsynonymous","I2S A14Y I138W",3
"lib2","SARS-CoV-2","TAGACAAACTTACCCG",1,126.37,6.03,-4.81,0.82,1.5,1.17,0.01,">1 nonsynonymous","G117F K132R G152M Y159W Y178T",5
"lib2","SARS-CoV-2","TAGACAAACTTATTCC",2,7.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","Y123S L162P Y178S",3
"lib2","SARS-CoV-2","TAGACAAAGACTATAA",3,3.31,NA,NA,NA,NA,NA,NA,"stop","G9H C61W Y66* V103I S113L R127S L183S",7
"lib2","SARS-CoV-2","TAGACAAAGATATCCC",1,2.4,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAGACAAAGGCCCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V52L F62M I72T A105S K128T Y159*",6
"lib2","SARS-CoV-2","TAGACAACAACAGTTT",5,3.45,NA,NA,NA,NA,NA,NA,"stop","L5* A105R N130L",3
"lib2","SARS-CoV-2","TAGACAACCCGTAAAC",4,170.8,10.34,-0.49,0.05,2.93,1.07,0,"1 nonsynonymous","Y178A",1
"lib2","SARS-CoV-2","TAGACAACCTATTATC",6,8.05,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13F T55Y A67Y F99P F160S",5
"lib2","SARS-CoV-2","TAGACAAGAAAAAAAT",2,12.22,10.77,-0.07,0.12,2.9,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGACAAGTCACATAT",9,100.08,8.62,-2.22,0.1,2.51,1.15,0,">1 nonsynonymous","R16M G146V",2
"lib2","SARS-CoV-2","TAGACAAGTTTACTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56* A81R A89F",3
"lib2","SARS-CoV-2","TAGACAATACCCCACA",9,400.13,10.78,-0.06,0.03,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGACAATACTTGCAG",3,1.67,NA,NA,NA,NA,NA,NA,"stop","S19K S41A K56* K94S R136F I142S",6
"lib2","SARS-CoV-2","TAGACAATGAATAATC",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R179S",1
"lib2","SARS-CoV-2","TAGACAATTCGGACAT",3,44.2,10.47,-0.37,0.04,2.94,1.05,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","TAGACACATTACACAA",1,7.78,6.02,-4.82,1.32,1.5,1.15,0.06,">1 nonsynonymous","A14R G51S D90A F99S W106S G116M",6
"lib2","SARS-CoV-2","TAGACACCAGCCTTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N I138L G152T",3
"lib2","SARS-CoV-2","TAGACACCCCGACTAA",7,12.53,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D34L C61E Q84S C150F",4
"lib2","SARS-CoV-2","TAGACACCTAAAATAT",5,39.65,8.74,-2.1,0.17,1.65,1.13,0.01,">1 nonsynonymous","V32L G51P",2
"lib2","SARS-CoV-2","TAGACACGACTTTATA",7,52.61,8.03,-2.8,0.14,1.5,1.09,0.01,">1 nonsynonymous","F8T D34C F44Y D90R V115A A190E P197R",7
"lib2","SARS-CoV-2","TAGACACGCAACCGGA",3,14.78,6,-4.84,2,3,1.07,0,">1 nonsynonymous","S69W F99K P149I G155I",4
"lib2","SARS-CoV-2","TAGACACGCGGACAGG",1,5.15,NA,NA,NA,NA,NA,NA,"stop","N13F S43W V77K G86* P169F",5
"lib2","SARS-CoV-2","TAGACACGTATCAATC",9,103.68,10.13,-0.7,0.07,2.65,1.04,0,">1 nonsynonymous","Y123T V153L",2
"lib2","SARS-CoV-2","TAGACACGTTCGGCAG",6,1.91,NA,NA,NA,NA,NA,NA,"stop","T3* F167Y",2
"lib2","SARS-CoV-2","TAGACAGAACAATAAT",6,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11F T55V A89L",3
"lib2","SARS-CoV-2","TAGACAGAGTCAGTCC",9,261.14,10.55,-0.29,0.04,2.91,1.07,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","TAGACAGATTCACTGA",2,202.36,9.03,-1.8,0.36,1.5,1,0.05,">1 nonsynonymous","N1F A89L Q163S",3
"lib2","SARS-CoV-2","TAGACAGCATTTTCAT",4,68.95,10.58,-0.26,0.04,2.99,1.01,0,">1 nonsynonymous","D59L S184G",2
"lib2","SARS-CoV-2","TAGACAGGCACGAAAG",4,17.23,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","F44L C49T C61S",3
"lib2","SARS-CoV-2","TAGACAGTCGCAATAT",11,274.61,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N151S P177T",2
"lib2","SARS-CoV-2","TAGACAGTGCGAGACG",2,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35D S113R L122P",3
"lib2","SARS-CoV-2","TAGACATAAAATGTAC",4,64.21,9.96,-0.87,0.07,2.63,1.13,0,">1 nonsynonymous","A33M G155I",2
"lib2","SARS-CoV-2","TAGACATAACACTAAG",12,106.97,10.54,-0.3,0.04,2.93,1.06,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","TAGACATACCACCTTA",9,196.13,10.14,-0.7,0.05,2.57,1.1,0,">1 nonsynonymous","S45T E186L",2
"lib2","SARS-CoV-2","TAGACATACCTCGGAT",1,71.26,10.38,-0.45,0.07,2.8,1.03,0,">1 nonsynonymous","L60Q I88V V115L L122V",4
"lib2","SARS-CoV-2","TAGACATACGGGCACA",3,0.4,NA,NA,NA,NA,NA,NA,"stop","C150R F167S S184*",3
"lib2","SARS-CoV-2","TAGACATATGAAACCT",2,51.51,10.85,0.02,0.06,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGACATCAACACTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","C6* F12G N107I N118P Y143I F160E",6
"lib2","SARS-CoV-2","TAGACATCAGTATAAT",17,166.19,10.36,-0.48,0.03,2.86,1.02,0,">1 nonsynonymous","T55L E135K",2
"lib2","SARS-CoV-2","TAGACATCGGGCTACA",2,118.31,9.74,-1.09,0.07,2.63,1.05,0,">1 nonsynonymous","C31H D59M P197R",3
"lib2","SARS-CoV-2","TAGACATGACGCATTC",21,332.06,10.11,-0.73,0.03,2.81,1.05,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","TAGACATGCGGAAAAT",8,165.44,9,-1.84,0.06,2.62,1.07,0,">1 nonsynonymous","N1M V37N G146R",3
"lib2","SARS-CoV-2","TAGACATGGAATCTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","W106I L122*",2
"lib2","SARS-CoV-2","TAGACATGTATGATTT",11,158.41,10.62,-0.21,0.03,2.91,1.08,0,"1 nonsynonymous","S53F",1
"lib2","SARS-CoV-2","TAGACATTAAAATGTT",6,99.09,10.82,-0.02,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGACATTCAAATAGC",9,50.05,8.92,-1.92,0.22,1.5,1.21,0.02,">1 nonsynonymous","C61P P82I Q163L",3
"lib2","SARS-CoV-2","TAGACATTCCAAGAGA",7,56.38,8.57,-2.27,0.1,2.33,1.1,0,">1 nonsynonymous","N4K L5K S41K S69C F156T",5
"lib2","SARS-CoV-2","TAGACCAAAAAACAAG",4,9.17,NA,NA,NA,NA,NA,NA,"stop","A81* S113Y",2
"lib2","SARS-CoV-2","TAGACCAAAAGACCGC",8,27.19,6.16,-4.67,0.74,1.5,1.15,0.02,">1 nonsynonymous","S45V P96M",2
"lib2","SARS-CoV-2","TAGACCAAAGTATGTA",1,45.54,9.93,-0.91,0.09,2.28,1.02,0,">1 nonsynonymous","R27K S36R V103T T201A",4
"lib2","SARS-CoV-2","TAGACCAACCATCCGT",3,116.42,10.59,-0.24,0.04,2.92,1.07,0,">1 nonsynonymous","N120S K128Y",2
"lib2","SARS-CoV-2","TAGACCAACGAAGGTA",1,14.51,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F17I Y93K",2
"lib2","SARS-CoV-2","TAGACCAATTGCTCTA",2,8.78,10.78,-0.06,0.05,2.84,1.15,0,">1 nonsynonymous","K26R P54Q L95I",3
"lib2","SARS-CoV-2","TAGACCACGTTGAAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P F44H L60R L95H D112C L122V P149M V180D",8
"lib2","SARS-CoV-2","TAGACCAGGGAACAAC",1,4.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K S19W",2
"lib2","SARS-CoV-2","TAGACCATCACGTGAC",3,35.75,11.28,0.44,0.13,2.94,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TAGACCATCTAAATCA",5,98.46,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","K128T Y143N F156C F167Q",4
"lib2","SARS-CoV-2","TAGACCCAGGAGTACC",7,97.1,6,-4.84,0.8,3,1.08,0,">1 nonsynonymous","N107D R124H",2
"lib2","SARS-CoV-2","TAGACCCCAACTTCAT",8,104.33,6,-4.84,2,3,1.24,0,">1 nonsynonymous","K26M F70S D98Y N107D G174S",5
"lib2","SARS-CoV-2","TAGACCCTTGGAAACA",6,53.67,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G86Q G174F",2
"lib2","SARS-CoV-2","TAGACCGAGGCAAGAA",11,37.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95E E135R",2
"lib2","SARS-CoV-2","TAGACCGCCGAACAAG",3,26.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L T85Y K94L G101F Y121L",5
"lib2","SARS-CoV-2","TAGACCTACCACGAAA",12,111.63,9.57,-1.27,0.07,2.74,1.05,0,">1 nonsynonymous","A14N K87S E141F",3
"lib2","SARS-CoV-2","TAGACCTCCGTCCTGC",3,32.51,10.85,0.02,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGACCTTAGCGTGAC",1,23.23,10.74,-0.1,0.08,2.9,1.11,0,"1 nonsynonymous","C195A",1
"lib2","SARS-CoV-2","TAGACGAAACCCCTGA",1,25.53,6,-4.84,1.97,1.5,1.08,0.03,">1 nonsynonymous","L5Q D98S D112P N120I S139F",5
"lib2","SARS-CoV-2","TAGACGACTCAATCGT",3,1.63,NA,NA,NA,NA,NA,NA,"stop","S53R T85P P133* V182I",4
"lib2","SARS-CoV-2","TAGACGAGAATGATTG",14,170.13,10.67,-0.16,0.03,2.92,1.09,0,"1 nonsynonymous","C61F",1
"lib2","SARS-CoV-2","TAGACGAGTCCACAAA",1,37.38,10.56,-0.28,0.06,2.92,1.07,0,">1 nonsynonymous","G9W N120S",2
"lib2","SARS-CoV-2","TAGACGATACAAAAAG",5,107.42,9.97,-0.86,0.12,2.32,1.06,0.01,">1 nonsynonymous","Y50H D59Y",2
"lib2","SARS-CoV-2","TAGACGATACACATAA",1,17.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I28S D98W L131W",3
"lib2","SARS-CoV-2","TAGACGATTAATACGC",5,81.33,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N58M D97A G152L C158A",4
"lib2","SARS-CoV-2","TAGACGCCACGACCGT",4,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37A I88M C158V R179Y",4
"lib2","SARS-CoV-2","TAGACGCCGATGGATG",12,84.22,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","T55A I72N Y159W",3
"lib2","SARS-CoV-2","TAGACGCCTCCGTTTA",1,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L Q84T W106E V180D",4
"lib2","SARS-CoV-2","TAGACGCTTATAGTTC",3,72.48,10.81,-0.03,0.05,2.9,1.1,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","TAGACGCTTCTGCTCA",3,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L R136Y T201V",3
"lib2","SARS-CoV-2","TAGACGGAAATGAGAA",2,0.34,NA,NA,NA,NA,NA,NA,"stop","D34I G51V D59* D90A I104Q",5
"lib2","SARS-CoV-2","TAGACGGACAAAACAC",2,23.09,10.66,-0.18,0.06,3,1,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","TAGACGGACGTCGTAA",6,45.46,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54R R127P G152S",3
"lib2","SARS-CoV-2","TAGACGGCCACTATCT",1,36.56,8.4,-2.43,0.23,1.8,1.09,0.02,">1 nonsynonymous","L38N G166V",2
"lib2","SARS-CoV-2","TAGACGTCGCTATAGC",6,152.35,8.21,-2.62,0.08,2.04,1.04,0,">1 nonsynonymous","T63K Y165T",2
"lib2","SARS-CoV-2","TAGACGTGTAAATATC",4,26.42,8.36,-2.48,0.21,1.85,1.07,0.02,">1 nonsynonymous","Y35Q D98L N120Y V153S F156A",5
"lib2","SARS-CoV-2","TAGACGTTAGACCCAA",7,2.57,NA,NA,NA,NA,NA,NA,"stop","L5* F17G R27D F47L T55W L125R P133Q",7
"lib2","SARS-CoV-2","TAGACGTTCATAACGC",8,34.63,9.83,-1,0.16,1.87,1.04,0.01,">1 nonsynonymous","S43M V182S",2
"lib2","SARS-CoV-2","TAGACTAAAGCCGTGG",17,137.53,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2F F12R N40T A81L K94Y G116F P161L",7
"lib2","SARS-CoV-2","TAGACTAAATCTTTAA",5,32.02,9.99,-0.85,0.13,1.76,1.09,0.01,">1 nonsynonymous","Y50S S139T S164R",3
"lib2","SARS-CoV-2","TAGACTACAGAATTAA",8,79.59,9.03,-1.81,0.15,1.5,1.12,0.01,">1 nonsynonymous","N13P S43R T100Y",3
"lib2","SARS-CoV-2","TAGACTACGGTATTAG",1,11.47,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K94C T100I A105F I142W F156P",5
"lib2","SARS-CoV-2","TAGACTACTTAAAGGG",3,1.37,NA,NA,NA,NA,NA,NA,"stop","A14F L60A D68* S113A Y178S",5
"lib2","SARS-CoV-2","TAGACTAGAGTGAATA",10,96.98,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N64L G86T L95V L122T P161D F167A",6
"lib2","SARS-CoV-2","TAGACTAGGCGTCCAG",7,4.62,NA,NA,NA,NA,NA,NA,"stop","L5K D98E N107* N151K G174I",5
"lib2","SARS-CoV-2","TAGACTAGTCACACCT",4,1.26,NA,NA,NA,NA,NA,NA,"stop","I28L K199*",2
"lib2","SARS-CoV-2","TAGACTAGTTATAAAA",2,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S I104S G146T",3
"lib2","SARS-CoV-2","TAGACTATAGTCTTCT",3,4.45,NA,NA,NA,NA,NA,NA,"stop","I28* Q168C R179L",3
"lib2","SARS-CoV-2","TAGACTCAAATTCCAC",9,108.97,10.19,-0.64,0.05,2.79,1,0,">1 nonsynonymous","L5E T85F D90Y T201V",4
"lib2","SARS-CoV-2","TAGACTCAAGAGGCAT",14,223.05,8.3,-2.54,0.11,2.78,1.06,0,">1 nonsynonymous","I28M S36I Y159P",3
"lib2","SARS-CoV-2","TAGACTCACGTCACAG",4,0.19,NA,NA,NA,NA,NA,NA,"stop","D90* K128P P149Q Y178R",4
"lib2","SARS-CoV-2","TAGACTCTGATTATTC",1,13.73,10.94,0.1,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGACTGACTGATAAA",1,17.78,10.37,-0.46,0.09,2.97,1,0.01,">1 nonsynonymous","L5R N40A D97Y",3
"lib2","SARS-CoV-2","TAGACTGATTACTAGA",2,52.13,10.84,0,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGACTGCGAGTGACG",3,46.67,10.84,0.01,0.06,2.85,1.13,0,"1 nonsynonymous","S53N",1
"lib2","SARS-CoV-2","TAGACTGCTGACACGC",5,34.04,8.39,-2.44,0.12,2.94,1.03,0,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","TAGACTGGATTACCGG",5,96.63,10.4,-0.43,0.04,2.92,1.08,0,"1 nonsynonymous","G174K",1
"lib2","SARS-CoV-2","TAGACTGTGTATGAAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","N1* G86W",2
"lib2","SARS-CoV-2","TAGACTGTGTGATACC",1,8.48,10.36,-0.48,0.11,2.82,1,0,">1 nonsynonymous","E10K T46V Q144R",3
"lib2","SARS-CoV-2","TAGACTGTTATTTATT",7,43.69,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S41K C61A G86A C158Y",4
"lib2","SARS-CoV-2","TAGACTTAAATCTCAT",2,17.34,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","C61Y W106L G155V",3
"lib2","SARS-CoV-2","TAGACTTCCAAATGTA",7,171.18,10.71,-0.12,0.08,2.78,1.13,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","TAGACTTGACCGACGC",18,55.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L P82N",2
"lib2","SARS-CoV-2","TAGACTTGATTTGAAT",1,14.49,6,-4.84,0.72,3,1.05,0,">1 nonsynonymous","L5P F62G F70D G86C W106E",5
"lib2","SARS-CoV-2","TAGACTTGTGGAGAAT",1,64.99,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5A V37D F44V A81C Y91I I142S",6
"lib2","SARS-CoV-2","TAGACTTGTTACACAG",2,14.36,6.92,-3.92,0.27,2.14,1.08,0.02,">1 nonsynonymous","L38N P82R L122F",3
"lib2","SARS-CoV-2","TAGACTTTTTCTAGAC",12,337.37,10.59,-0.25,0.02,2.95,1.04,0,">1 nonsynonymous","Y123S A190V",2
"lib2","SARS-CoV-2","TAGAGAAAATATCAAC",1,8.06,10.19,-0.64,0.14,2.08,1.01,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TAGAGAAACCATACCA",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N Y35V C61V S200H",4
"lib2","SARS-CoV-2","TAGAGAAACCTCACAA",5,0.74,NA,NA,NA,NA,NA,NA,"stop","T15V A42T K48* N120V",4
"lib2","SARS-CoV-2","TAGAGAAAGCCTCCGC",7,16.09,6.12,-4.71,0.96,1.5,1.09,0.04,">1 nonsynonymous","P82L L122D",2
"lib2","SARS-CoV-2","TAGAGAACAACGGGCA",20,233.71,10.72,-0.11,0.02,2.94,1.07,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","TAGAGAACACAACCAC",3,13.01,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","K56L E135H",2
"lib2","SARS-CoV-2","TAGAGAACATGTATAC",6,120.26,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V20E D90C W106S R124S E154F",5
"lib2","SARS-CoV-2","TAGAGAACGATCCAAA",1,8.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I28P I88P C150Y Y159H",4
"lib2","SARS-CoV-2","TAGAGAAGGCAACCAA",2,37.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V52C N157T N171A Q176R",4
"lib2","SARS-CoV-2","TAGAGAAGTCCAGCGG",11,58.18,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","D34T Y143R",2
"lib2","SARS-CoV-2","TAGAGAATATAAAGCT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5G K56* A89* T201A",4
"lib2","SARS-CoV-2","TAGAGAATTAAAAAAC",1,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77I A81S V182Q",3
"lib2","SARS-CoV-2","TAGAGAATTAGATTTC",3,56.33,10.52,-0.32,0.05,2.93,1.01,0,"1 nonsynonymous","T140P",1
"lib2","SARS-CoV-2","TAGAGAATTGATCACT",2,52.65,10.52,-0.31,0.04,2.91,1.04,0,">1 nonsynonymous","G9H S19A",2
"lib2","SARS-CoV-2","TAGAGACACCTTATGA",5,43.1,9.31,-1.53,0.1,1.86,1.08,0,">1 nonsynonymous","S41L G51F V115K F156H T201W",5
"lib2","SARS-CoV-2","TAGAGACACGTAACTT",7,148.01,10.78,-0.05,0.05,2.89,1.1,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TAGAGACATAAAAACA",4,14.05,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S69G L95E E186N",3
"lib2","SARS-CoV-2","TAGAGACCCTTCCAAT",8,135,7.44,-3.4,0.1,1.86,1.14,0,"1 nonsynonymous","Y175I",1
"lib2","SARS-CoV-2","TAGAGACTAACCAAGT",5,109.4,10.18,-0.65,0.05,2.83,1.11,0,"1 nonsynonymous","Y35K",1
"lib2","SARS-CoV-2","TAGAGACTACATGATT",1,39.34,11.01,0.17,0.07,2.97,1.05,0,">1 nonsynonymous","Y39T D97M P197W",3
"lib2","SARS-CoV-2","TAGAGACTAGGCAGTC",3,151.7,9.78,-1.06,0.06,2.6,1.1,0,">1 nonsynonymous","K56M D90M I142V N151C",4
"lib2","SARS-CoV-2","TAGAGAGAACACAATA",5,41.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F126C V180G",2
"lib2","SARS-CoV-2","TAGAGAGAAGCAGTAA",9,103.56,6,-4.84,0.77,3,1.16,0,">1 nonsynonymous","G101N N109V T148A",3
"lib2","SARS-CoV-2","TAGAGAGAGCGACCGT",2,23.96,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A22S Y91L P149I F167L",4
"lib2","SARS-CoV-2","TAGAGAGCGCATGGAC",12,70.96,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","L38T D97W T100I Q168E V180I",5
"lib2","SARS-CoV-2","TAGAGAGTAAGCGTGT",17,74.64,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C6M G101L K132W L162Q",4
"lib2","SARS-CoV-2","TAGAGATAAACTGGGT",3,12.67,6.8,-4.04,0.27,1.5,1.06,0.02,">1 nonsynonymous","V11S S113C",2
"lib2","SARS-CoV-2","TAGAGATACTTTCTAC",5,36.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10C V37L Y121D Q168L",4
"lib2","SARS-CoV-2","TAGAGATTCCATTTCT",7,52.8,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","L95H G101C V103K G117I",4
"lib2","SARS-CoV-2","TAGAGCAAAGAGGAAC",8,20.43,6,-4.84,2,3,1.06,0,">1 nonsynonymous","S41C G86R T100A S129L S147N",5
"lib2","SARS-CoV-2","TAGAGCAACAGATAAA",6,110.92,10.15,-0.69,0.04,2.72,1.05,0,">1 nonsynonymous","A14D G83C",2
"lib2","SARS-CoV-2","TAGAGCAACAGTTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C S129N F134G",3
"lib2","SARS-CoV-2","TAGAGCAATGAATTCA",2,22.82,10.2,-0.64,0.08,2.86,1.14,0,">1 nonsynonymous","C6M S43R",2
"lib2","SARS-CoV-2","TAGAGCAATGAATTGC",4,29.15,9.97,-0.87,0.12,2.18,1.05,0.01,">1 nonsynonymous","E76Y T201A",2
"lib2","SARS-CoV-2","TAGAGCACAGAACTAA",3,41.23,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L95C C102M K128G",3
"lib2","SARS-CoV-2","TAGAGCACTACACGTA",4,19.14,9.25,-1.59,0.34,2.01,1.05,0.06,">1 nonsynonymous","D34T K128Y Y143L V153R",4
"lib2","SARS-CoV-2","TAGAGCACTGATTGCA",8,46.92,10.79,-0.05,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAGCAGTCACGTCT",6,65.98,10.65,-0.18,0.05,2.91,1.07,0,">1 nonsynonymous","S45A D97T",2
"lib2","SARS-CoV-2","TAGAGCATAAAATTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84N R127S P149A",3
"lib2","SARS-CoV-2","TAGAGCATCTGGATTA",8,30.44,6.08,-4.76,0.62,1.5,1.05,0.01,">1 nonsynonymous","G9A K48L I104R N110W L131S",5
"lib2","SARS-CoV-2","TAGAGCATTATTTTAA",11,83.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18C C61F I88A R127L",4
"lib2","SARS-CoV-2","TAGAGCATTGGTCGTT",3,128.68,9.77,-1.07,0.03,2.87,1.03,0,">1 nonsynonymous","K26T Y121P",2
"lib2","SARS-CoV-2","TAGAGCCACAGACAAG",3,55.44,10.64,-0.19,0.06,2.94,1.04,0,">1 nonsynonymous","T100H Y121F",2
"lib2","SARS-CoV-2","TAGAGCCCAAAAGGTC",2,0,NA,NA,NA,NA,NA,NA,"stop","S19* S41V Y66F S139Y G174S",5
"lib2","SARS-CoV-2","TAGAGCCTGAAATCCG",6,98.09,8.06,-2.78,0.43,1.5,1,0.08,">1 nonsynonymous","I2L G9C S43P C102P R124N N130M",6
"lib2","SARS-CoV-2","TAGAGCGCAATTCAAA",1,61.59,10.78,-0.05,0.07,2.85,1.19,0,"1 nonsynonymous","D97M",1
"lib2","SARS-CoV-2","TAGAGCGGACGCAAAT",14,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22G L95M I138R T148S",4
"lib2","SARS-CoV-2","TAGAGCTAATACTAAG",5,0.05,NA,NA,NA,NA,NA,NA,"stop","G9* A18L D68Q",3
"lib2","SARS-CoV-2","TAGAGCTTAGCAACGT",3,13.82,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89Q L183R",2
"lib2","SARS-CoV-2","TAGAGGAACCGCAGTA",10,51.93,11.08,0.24,0.05,2.98,1.04,0,">1 nonsynonymous","Q163Y A192V",2
"lib2","SARS-CoV-2","TAGAGGACTCTCAGTA",4,36.1,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","A18F S43I K94N N107V",4
"lib2","SARS-CoV-2","TAGAGGACTTGATATG",4,41.13,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S19K R27F L60T G117T",4
"lib2","SARS-CoV-2","TAGAGGAGAATCTTCC",4,12.81,6.81,-4.03,0.34,2.95,1.15,0,">1 nonsynonymous","C49Y K94M S164L",3
"lib2","SARS-CoV-2","TAGAGGAGCCGGGCAT",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37H V115M",2
"lib2","SARS-CoV-2","TAGAGGAGCTTACATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V P149N G174H V180C",4
"lib2","SARS-CoV-2","TAGAGGAGGCCGGATT",8,120.61,6.12,-4.71,0.59,1.5,1.19,0.01,">1 nonsynonymous","S36P K48N A81S Y91K",4
"lib2","SARS-CoV-2","TAGAGGAGTGGAGTAG",4,81.12,8.18,-2.65,0.11,1.78,1.1,0,">1 nonsynonymous","D59P Y143E",2
"lib2","SARS-CoV-2","TAGAGGAGTTCAGAAA",4,44.71,8.97,-1.87,0.14,1.79,1.09,0.01,">1 nonsynonymous","V11Y L162T P197G",3
"lib2","SARS-CoV-2","TAGAGGCACGGTAACA",18,0.38,NA,NA,NA,NA,NA,NA,"stop","L5T S45R D59*",3
"lib2","SARS-CoV-2","TAGAGGCATGTCGAAT",3,23.35,10.76,-0.08,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAGGGCAAGAAGCG",13,102.13,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Q84H N92H L122V",3
"lib2","SARS-CoV-2","TAGAGGGCCAAAGCAT",6,1.01,NA,NA,NA,NA,NA,NA,"stop","I2G Y119T D137L P149*",4
"lib2","SARS-CoV-2","TAGAGGGGCCGTAAAT",3,41.82,10.83,0,0.03,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAGGGTAACAGAAT",5,31.2,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","L5F L57T P82V F134T",4
"lib2","SARS-CoV-2","TAGAGGGTACGAAATG",9,43.76,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","P7T F62G P96L I142K",4
"lib2","SARS-CoV-2","TAGAGGTAAAACACCA",4,19.18,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","D97I F167G",2
"lib2","SARS-CoV-2","TAGAGGTAAATCCGTA",2,0.58,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TAGAGGTCCATTCCAA",2,8.21,10.03,-0.81,0.09,2.91,1.09,0,"1 nonsynonymous","K87E",1
"lib2","SARS-CoV-2","TAGAGGTCGAGTCGCA",4,90.79,9.63,-1.21,0.07,2.78,1.07,0,">1 nonsynonymous","T55G G146F",2
"lib2","SARS-CoV-2","TAGAGGTTACACTAAG",2,119.18,10.82,-0.01,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAGTAAGAACCTAG",1,58.1,10.59,-0.25,0.04,2.89,1.1,0,">1 nonsynonymous","V37F F156L",2
"lib2","SARS-CoV-2","TAGAGTAATTATTCGC",10,136.27,9.19,-1.65,0.32,1.5,1,0.05,">1 nonsynonymous","V11W Y93L",2
"lib2","SARS-CoV-2","TAGAGTACAAGATCAA",7,85.64,6.49,-4.35,0.32,1.5,1.18,0.01,">1 nonsynonymous","Y21T Y66A F160I",3
"lib2","SARS-CoV-2","TAGAGTACAAGCTACA",3,64.72,10.86,0.03,0.07,2.93,1.08,0,">1 nonsynonymous","Y39A T201H",2
"lib2","SARS-CoV-2","TAGAGTACCCGGACGG",10,131.14,10.18,-0.66,0.06,2.55,1.04,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TAGAGTACCTGGCGAC",5,46.06,10.38,-0.45,0.06,2.97,1.06,0,">1 nonsynonymous","G9A A42T F47C",3
"lib2","SARS-CoV-2","TAGAGTATATTCACAA",3,42.05,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","S45N I88S P177L",3
"lib2","SARS-CoV-2","TAGAGTATGTCCAGAT",10,142.69,9.65,-1.18,0.09,2.17,1.02,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TAGAGTCACCCAACTA",3,43.53,7.98,-2.86,0.17,1.77,1.19,0.01,">1 nonsynonymous","C6A T55A D97H G146A G174R",5
"lib2","SARS-CoV-2","TAGAGTCACGCAATAT",1,15.16,10.89,0.05,0.11,2.78,1.18,0,"1 nonsynonymous","N130S",1
"lib2","SARS-CoV-2","TAGAGTCAGAATGACG",12,100.32,9.81,-1.03,0.06,2.12,1.06,0,">1 nonsynonymous","G9E L38R N151A",3
"lib2","SARS-CoV-2","TAGAGTCCTACAACCA",5,21.1,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","N1R L60F A89L",3
"lib2","SARS-CoV-2","TAGAGTCGAATATTTA",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64M I80E D97N K128V",4
"lib2","SARS-CoV-2","TAGAGTCTAAATCCAG",2,59.01,10.62,-0.22,0.07,2.74,1.26,0,"1 nonsynonymous","S184I",1
"lib2","SARS-CoV-2","TAGAGTCTGAAACGTT",2,41,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G83T A89S F99V S164V V173M",5
"lib2","SARS-CoV-2","TAGAGTGAATATTAAT",3,12.33,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D68V Q84T F134A",3
"lib2","SARS-CoV-2","TAGAGTGACGCACCAT",13,114.74,10.81,-0.02,0.06,2.89,1.13,0,"1 nonsynonymous","P149E",1
"lib2","SARS-CoV-2","TAGAGTGCTACTATCA",2,44.8,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44K S69L N107P Q168L T201L",5
"lib2","SARS-CoV-2","TAGAGTGGTAAAGATG",2,34.99,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F99L L162V G172V",3
"lib2","SARS-CoV-2","TAGAGTGTACCCTCTA",3,96.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43R D137P",2
"lib2","SARS-CoV-2","TAGAGTGTGAAAAATA",2,90.48,9.73,-1.1,0.04,2.87,1.06,0,">1 nonsynonymous","K48V Q84C F156L",3
"lib2","SARS-CoV-2","TAGAGTTAATGATATG",1,12.76,10.72,-0.11,0.08,2.84,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGAGTTAATTCCTTC",5,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66Q K114M V181P V182F",4
"lib2","SARS-CoV-2","TAGAGTTACGATGCAA",3,36.42,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","N4F G86S Y93L F167D",4
"lib2","SARS-CoV-2","TAGAGTTCCAGCGTGA",2,19.85,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F8S V103I P133Y",3
"lib2","SARS-CoV-2","TAGAGTTCTAGCATAA",17,121.52,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P7H T85C P96D Y119I F160T",5
"lib2","SARS-CoV-2","TAGAGTTGGGGCGGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3Q T15* D90Y Y121E",4
"lib2","SARS-CoV-2","TAGAGTTTAAATATGT",6,13.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13K T85Y N120T V182P",4
"lib2","SARS-CoV-2","TAGATAAAACCTGCAT",13,82.09,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y35L G51P V77S L122W",4
"lib2","SARS-CoV-2","TAGATAAACCGACAGC",13,181.81,10.26,-0.57,0.05,2.78,1.05,0,">1 nonsynonymous","L5G D98S K114M R136K",4
"lib2","SARS-CoV-2","TAGATAAAGTAAGAAT",3,60.31,10.83,-0.01,0.09,2.88,1.03,0,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","TAGATAAAGTCCCGCT",7,113.39,10.82,-0.02,0.05,2.9,1.08,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","TAGATAAAGTCTCCAC",2,1.63,NA,NA,NA,NA,NA,NA,"stop","K128R P133N Y143* G174T",4
"lib2","SARS-CoV-2","TAGATAAATACCATGC",5,85.25,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","F47S P82H",2
"lib2","SARS-CoV-2","TAGATAAATGCTAGCA",12,264.91,10.79,-0.05,0.02,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATAAATTAGAAAC",8,2.66,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","TAGATAAATTTATTAT",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Y F62Y G86N S139I",4
"lib2","SARS-CoV-2","TAGATAACAACTTGAA",2,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102Y P191R",2
"lib2","SARS-CoV-2","TAGATAACCTATTTTG",1,6.97,6.44,-4.4,0.62,1.5,1.11,0.01,">1 nonsynonymous","C31R K94Q F160S",3
"lib2","SARS-CoV-2","TAGATAACGTGCAGGC",2,9.88,8.28,-2.55,0.38,1.5,1,0.04,">1 nonsynonymous","F12G E141Y",2
"lib2","SARS-CoV-2","TAGATAACTACCAAGA",4,46.27,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","S43V C61P T100P G146S K198Y",5
"lib2","SARS-CoV-2","TAGATAAGCTAGTAGT",13,3.37,NA,NA,NA,NA,NA,NA,"stop","D90L V153S Q163* Y165L",4
"lib2","SARS-CoV-2","TAGATAAGTTAAACGG",1,21.54,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T3M V20M S41W N64R D98N P161G",6
"lib2","SARS-CoV-2","TAGATAATAAGAAACT",8,37.67,6.65,-4.19,0.38,1.5,1.13,0.02,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","TAGATAATAATGTTAG",21,215.63,10.9,0.06,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATAATCAATAATA",9,1.06,NA,NA,NA,NA,NA,NA,"stop","L60* Y165K",2
"lib2","SARS-CoV-2","TAGATAATTAGGCAAT",9,251.11,10.35,-0.48,0.02,2.88,1.09,0,">1 nonsynonymous","T3R Y35P T55E",3
"lib2","SARS-CoV-2","TAGATACAAAACTAAA",3,27.05,10,-0.84,0.13,1.98,1,0.01,">1 nonsynonymous","W106K S139D",2
"lib2","SARS-CoV-2","TAGATACACCAAATAT",1,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q T170S",2
"lib2","SARS-CoV-2","TAGATACACGACACAA",6,9.3,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V103T S113T V180R",3
"lib2","SARS-CoV-2","TAGATACAGCGTCCAC",7,90.31,9.28,-1.56,0.07,1.79,1.08,0,">1 nonsynonymous","I28R K114R",2
"lib2","SARS-CoV-2","TAGATACATTAAGAGA",9,52.8,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R25F Y35G G51D",3
"lib2","SARS-CoV-2","TAGATACCACGTAGCC",1,44.94,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","W106L R127V",2
"lib2","SARS-CoV-2","TAGATACCATCTAATG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","R16V V71*",2
"lib2","SARS-CoV-2","TAGATACCATTTATTG",11,89.28,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","G86A G101H I138Q",3
"lib2","SARS-CoV-2","TAGATACCTCCGTGGG",1,7.88,8.15,-2.69,0.14,2.71,1.01,0.01,">1 nonsynonymous","V37L N58P Y143A",3
"lib2","SARS-CoV-2","TAGATACCTTGATCCC",4,111.3,10.41,-0.43,0.05,2.86,1.06,0,">1 nonsynonymous","N64V D98V P149K",3
"lib2","SARS-CoV-2","TAGATACGAAAACCTA",4,47.9,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T63L G101T K128Y V153I",4
"lib2","SARS-CoV-2","TAGATACGGACCTAAG",5,31.35,10.72,-0.11,0.04,2.85,1.16,0,">1 nonsynonymous","I2V N64W",2
"lib2","SARS-CoV-2","TAGATACTACGCCGTA",1,2.61,NA,NA,NA,NA,NA,NA,"stop","D90N G152*",2
"lib2","SARS-CoV-2","TAGATAGAAGGTATTT",6,45.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61V G117Q Y143S V173L",4
"lib2","SARS-CoV-2","TAGATAGACAATTCGT",5,0.82,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib2","SARS-CoV-2","TAGATAGACATAATAC",9,89.71,10.32,-0.52,0.06,2.9,1.02,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","TAGATAGAGGGTCGAC",6,135.06,9.56,-1.28,0.04,2.85,1.06,0,">1 nonsynonymous","S36I G166V",2
"lib2","SARS-CoV-2","TAGATAGAGTGTGCGT",3,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R L60Y P82S Y123S",4
"lib2","SARS-CoV-2","TAGATAGCCCGATCTG",3,28.96,10.71,-0.12,0.05,2.9,1.13,0,">1 nonsynonymous","I2S I138T G152S",3
"lib2","SARS-CoV-2","TAGATAGCTTAGCAAA",13,6.32,NA,NA,NA,NA,NA,NA,"stop","G9* V77D A105S",3
"lib2","SARS-CoV-2","TAGATAGGAACACAGC",6,107.04,10.76,-0.08,0.03,2.94,1.07,0,">1 nonsynonymous","Y35M D97S",2
"lib2","SARS-CoV-2","TAGATAGTGATAAATA",7,16.57,10.84,0,0.08,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATAGTTGCGAAGT",5,185.37,10.62,-0.22,0.04,2.88,1.07,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","TAGATAGTTGGCAGTG",5,68.35,10.91,0.08,0.07,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGATATACCAAGGTA",4,85.28,8.49,-2.35,0.13,1.6,1.09,0.01,"1 nonsynonymous","Y165K",1
"lib2","SARS-CoV-2","TAGATATATATATGAA",4,20.02,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P82S Y143L C150F",3
"lib2","SARS-CoV-2","TAGATATCCAAATACT",8,52.86,8.54,-2.29,0.17,1.7,1.16,0.01,">1 nonsynonymous","T3Y N151E L162T",3
"lib2","SARS-CoV-2","TAGATATCCCCTAGTT",1,47.36,7.53,-3.3,0.18,1.5,1.08,0.01,">1 nonsynonymous","N30L I142Q P169S",3
"lib2","SARS-CoV-2","TAGATATCTACTGAAA",11,142.32,9.72,-1.12,0.03,2.09,1.03,0,">1 nonsynonymous","T3F Y35H T63C",3
"lib2","SARS-CoV-2","TAGATATTACTAGGCC",3,60.97,10.9,0.06,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATATTCGCGGAGA",10,74.87,6,-4.84,0.59,1.5,1.12,0,">1 nonsynonymous","N13I V20L V37R",3
"lib2","SARS-CoV-2","TAGATATTTCGGGGAG",1,7.47,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y93H T140C",2
"lib2","SARS-CoV-2","TAGATCAAAACACAAA",8,104.34,9.98,-0.86,0.06,2.91,1.01,0,">1 nonsynonymous","D90H G174K",2
"lib2","SARS-CoV-2","TAGATCAAATATGTAT",5,30.08,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6S R27L V103L V182T",4
"lib2","SARS-CoV-2","TAGATCAAGGCTCAAC",2,2.24,NA,NA,NA,NA,NA,NA,"stop","C6G K114* T170F",3
"lib2","SARS-CoV-2","TAGATCAATCCGACCA",17,121.37,8.51,-2.32,0.12,1.64,1.06,0.01,">1 nonsynonymous","R136D F160T",2
"lib2","SARS-CoV-2","TAGATCAGAGCTGGTA",3,115.96,10.46,-0.37,0.03,2.94,1.08,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","TAGATCATGGTAAGTA",3,32.51,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","P82T C102S W106N L125V",4
"lib2","SARS-CoV-2","TAGATCATTCCCATTA",5,2.81,NA,NA,NA,NA,NA,NA,"stop","N4L N30K A33H N64E D68E G101*",6
"lib2","SARS-CoV-2","TAGATCATTTTAATGA",2,50.38,10.4,-0.44,0.04,2.85,1.05,0,">1 nonsynonymous","N24Y Q84T",2
"lib2","SARS-CoV-2","TAGATCCAAGATAGTA",1,57.26,10.36,-0.48,0.03,3,1.01,0,">1 nonsynonymous","V37S C61A P149K G155T",4
"lib2","SARS-CoV-2","TAGATCCAGAGGATGG",8,95.4,10.84,0.01,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATCCATGTTAATT",4,93.38,10.82,-0.02,0.04,2.9,1.1,0,"1 nonsynonymous","A42Q",1
"lib2","SARS-CoV-2","TAGATCCCAATAGGAA",2,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S D97I N110P L122K K128V K199S",6
"lib2","SARS-CoV-2","TAGATCCGTAATGATT",2,95.16,9.84,-0.99,0.05,2.83,1.02,0,">1 nonsynonymous","I2L Y121S",2
"lib2","SARS-CoV-2","TAGATCCTATAGGCAG",2,4.74,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TAGATCCTGAAATTAG",1,13.81,6,-4.84,2,3,1.12,0,">1 nonsynonymous","N24L F70M P82L T100M K132C E141F T201G",7
"lib2","SARS-CoV-2","TAGATCGACTAAGATA",7,34.76,9.88,-0.96,0.09,2.33,1,0,">1 nonsynonymous","C6W C61Y D97S",3
"lib2","SARS-CoV-2","TAGATCGGCTCATAAA",7,98.51,10.28,-0.56,0.03,2.99,1,0,">1 nonsynonymous","A81T K87R",2
"lib2","SARS-CoV-2","TAGATCGGGGGATGTG",3,9.2,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","N58L I88G W106L E135S G146H",5
"lib2","SARS-CoV-2","TAGATCGTAGTATCAA",9,138.2,10.14,-0.69,0.04,2.84,1.05,0,">1 nonsynonymous","Y35M G83Y G155D",3
"lib2","SARS-CoV-2","TAGATCTAAGCGCGTA",2,74.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9P K128S C158N G166K",4
"lib2","SARS-CoV-2","TAGATCTACAAACTAC",4,23.02,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L95S G155L V173S R179G",4
"lib2","SARS-CoV-2","TAGATCTCGTTCAAGC",7,24.6,7.17,-3.66,0.42,1.5,1.28,0.05,">1 nonsynonymous","N4K F47R Y119E K128L",4
"lib2","SARS-CoV-2","TAGATGAAAACGACTG",7,3.89,NA,NA,NA,NA,NA,NA,"stop","D90L S108V S113* L122S P169Y G174A",6
"lib2","SARS-CoV-2","TAGATGAAAAGGGAAA",2,55.48,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6D V37G P82S A89T L162S",5
"lib2","SARS-CoV-2","TAGATGAAACGTACAG",6,173.91,10.34,-0.5,0.03,2.92,1.03,0,">1 nonsynonymous","G9S C49W",2
"lib2","SARS-CoV-2","TAGATGAAAGCGTGAA",9,163.83,9.99,-0.84,0.05,2.69,1.03,0,">1 nonsynonymous","T15C Y66F",2
"lib2","SARS-CoV-2","TAGATGAACTCTACCA",2,45.3,10.6,-0.23,0.06,2.91,1.04,0,">1 nonsynonymous","T85Y L122M G152S K198Q",4
"lib2","SARS-CoV-2","TAGATGAATCATAGCA",10,115.74,9.29,-1.54,0.06,1.75,1.07,0,">1 nonsynonymous","N4L S29W D90R",3
"lib2","SARS-CoV-2","TAGATGAATGTATACC",4,0.28,NA,NA,NA,NA,NA,NA,"stop","N107D S147* V173G",3
"lib2","SARS-CoV-2","TAGATGACAAATGACA",9,317.08,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F44E L122P P177S",3
"lib2","SARS-CoV-2","TAGATGACATCCGTCG",1,21.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G9V T15S W23Q A89T",4
"lib2","SARS-CoV-2","TAGATGAGCCATACTC",1,34.76,10.8,-0.03,0.05,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATGAGCGATATCC",5,128.54,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K132V Q144F P161L Q176W",4
"lib2","SARS-CoV-2","TAGATGATGATATCCA",6,53.67,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F8V N64R P96Y Y119S S139R G146M",6
"lib2","SARS-CoV-2","TAGATGATTGAAAACA",1,13.12,8.8,-2.04,0.23,2.01,1.18,0.02,">1 nonsynonymous","L38V N118F K199H",3
"lib2","SARS-CoV-2","TAGATGCACACATTGT",4,54.06,10.83,-0.01,0.05,2.89,1.13,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","TAGATGCATAAATCAA",16,3.58,NA,NA,NA,NA,NA,NA,"stop","Q84* N120K S129M",3
"lib2","SARS-CoV-2","TAGATGCCATCCACTT",3,1.46,NA,NA,NA,NA,NA,NA,"stop","F44I F99*",2
"lib2","SARS-CoV-2","TAGATGCGTTAGGACA",6,106.88,10.79,-0.05,0.04,2.9,1.12,0,"1 nonsynonymous","I2R",1
"lib2","SARS-CoV-2","TAGATGCTAATGGAAG",5,58.86,6.67,-4.16,0.47,1.5,1.14,0.03,">1 nonsynonymous","K87M S129V Y175R",3
"lib2","SARS-CoV-2","TAGATGCTCGCTATGC",5,52.97,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","Q84N A105R T201K",3
"lib2","SARS-CoV-2","TAGATGCTCTCACGTA",3,72.79,9.25,-1.59,0.07,2.67,1.08,0,">1 nonsynonymous","F12I A18K K87Q",3
"lib2","SARS-CoV-2","TAGATGGAAGTGTAAT",3,1.46,NA,NA,NA,NA,NA,NA,"stop","N4Y A81L Y119*",3
"lib2","SARS-CoV-2","TAGATGGCAGCGACTC",6,25.83,6,-4.84,2,1.5,1.3,0.08,">1 nonsynonymous","T55D Y93G D97S L122F E141Q",5
"lib2","SARS-CoV-2","TAGATGGCGTAATCTA",9,89.13,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L38R A89K T100A S184C",4
"lib2","SARS-CoV-2","TAGATGGGGCAGATAT",7,53.33,9.27,-1.57,0.11,1.75,1.07,0,">1 nonsynonymous","F8R T201G",2
"lib2","SARS-CoV-2","TAGATGGGGGTAAATG",1,24.49,10.78,-0.06,0.06,2.86,1.16,0,">1 nonsynonymous","D90M I138L",2
"lib2","SARS-CoV-2","TAGATGGGTAAGTATT",1,41.52,10.83,0,0.07,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATGGTAGCTGGGT",3,0.24,NA,NA,NA,NA,NA,NA,"stop","A89H C150* H189N",3
"lib2","SARS-CoV-2","TAGATGGTCCAATGGA",11,125.46,9.19,-1.65,0.06,1.62,1.08,0,">1 nonsynonymous","E10P Y39L A105Q",3
"lib2","SARS-CoV-2","TAGATGTAAGGATGGC",1,9.56,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V11R V37A Y50S T85Q S164T K199V",6
"lib2","SARS-CoV-2","TAGATGTAGACCAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S S41R D90P E135T",4
"lib2","SARS-CoV-2","TAGATGTAGTTCCAAT",1,27.43,10.15,-0.68,0.12,2.67,1.09,0.01,">1 nonsynonymous","T15H Y66N G196W",3
"lib2","SARS-CoV-2","TAGATGTATTATGGCA",14,282.2,10.71,-0.13,0.04,2.92,1.1,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","TAGATGTCCTCTGCCC",14,159.61,10.96,0.12,0.06,2.94,1.07,0,">1 nonsynonymous","G9D T201P",2
"lib2","SARS-CoV-2","TAGATGTTAGGTTCTA",2,37.21,10.36,-0.47,0.05,2.98,1,0,"1 nonsynonymous","N107S",1
"lib2","SARS-CoV-2","TAGATTAAAGAAATCA",1,0.46,NA,NA,NA,NA,NA,NA,"stop","D34F F70R G83P D97* W106V C150R Q168C",7
"lib2","SARS-CoV-2","TAGATTAAATCCAATA",12,188.8,8.92,-1.91,0.04,3,1.04,0,">1 nonsynonymous","V37D N157H",2
"lib2","SARS-CoV-2","TAGATTAACCTATGCC",3,37.3,10.64,-0.2,0.05,2.99,1,0,">1 nonsynonymous","N40K A67C",2
"lib2","SARS-CoV-2","TAGATTACACAGTACA",4,34.33,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F8D K94S G166K",3
"lib2","SARS-CoV-2","TAGATTACCGATTTCC",8,56.93,9.05,-1.78,0.22,1.5,1,0.02,">1 nonsynonymous","A105I E141M P149V",3
"lib2","SARS-CoV-2","TAGATTACCTAACGCA",6,128.45,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7V T148I Y159C",3
"lib2","SARS-CoV-2","TAGATTACGTCGCAAT",10,36.12,7.1,-3.73,0.21,1.59,1.1,0.01,">1 nonsynonymous","R78F E135H G155E P169F",4
"lib2","SARS-CoV-2","TAGATTAGACAAAGGT",11,85.38,9.68,-1.16,0.13,1.91,1.08,0.01,">1 nonsynonymous","P82L T100L",2
"lib2","SARS-CoV-2","TAGATTAGGATGATTA",5,2.74,NA,NA,NA,NA,NA,NA,"stop","W23* K56L N107A Y143S Q163Y",5
"lib2","SARS-CoV-2","TAGATTAGGGGCGACA",1,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W F185S",2
"lib2","SARS-CoV-2","TAGATTATACTATAAG",10,36.43,7.12,-3.71,0.44,1.5,1.08,0.05,">1 nonsynonymous","D90L Y121K S184K",3
"lib2","SARS-CoV-2","TAGATTATTACGCACA",8,167.93,10.84,0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTCACTACAATG",3,2.19,NA,NA,NA,NA,NA,NA,"stop","T55H T100P Y143* V173I",4
"lib2","SARS-CoV-2","TAGATTCAGAAAATTC",4,57.27,10.82,-0.01,0.06,2.94,1.08,0,"1 nonsynonymous","S41D",1
"lib2","SARS-CoV-2","TAGATTCCAATTAACA",3,43.81,9.88,-0.96,0.1,2.61,1.14,0.01,">1 nonsynonymous","Y21F C31V V115T",3
"lib2","SARS-CoV-2","TAGATTCCTCAAAACA",26,319.76,10.52,-0.32,0.04,2.91,1.08,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","TAGATTCGAGGGCGAT",1,19.11,6.48,-4.36,0.47,1.5,1.15,0.03,">1 nonsynonymous","A105C P133D Q144K",3
"lib2","SARS-CoV-2","TAGATTCGATTGTGAA",2,76.41,10.84,0.01,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTCGCAGACTTG",3,34.21,7.08,-3.76,0.38,1.5,1.13,0.04,">1 nonsynonymous","G9N A14M T100N N107A P133S",5
"lib2","SARS-CoV-2","TAGATTCTAACTTGAT",17,195.23,10.83,-0.01,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTCTCAATGTTA",3,24.67,10.78,-0.06,0.07,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTGAAAAAGTTA",1,8.51,6.45,-4.38,1.17,3,1.1,0.02,">1 nonsynonymous","F12Y S113R N120F R124A",4
"lib2","SARS-CoV-2","TAGATTGAAAGAATAA",10,53.05,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D68V P96Q N118R",3
"lib2","SARS-CoV-2","TAGATTGAACTTTTTT",7,126.87,9.38,-1.46,0.04,2.89,1.12,0,"1 nonsynonymous","Y119M",1
"lib2","SARS-CoV-2","TAGATTGACATTTATT",2,12.11,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y91S W106S L122P",3
"lib2","SARS-CoV-2","TAGATTGAGGACGTGA",15,42.1,6,-4.84,0.89,1.5,1.14,0.01,">1 nonsynonymous","E10R N13D D90I P149S",4
"lib2","SARS-CoV-2","TAGATTGAGTTCGAAC",1,13.54,10.38,-0.46,0.24,2.75,1.16,0.03,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","TAGATTGATAATTCCA",1,23.56,10.09,-0.75,0.26,1.98,1.02,0.03,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TAGATTGGAAAGGTCG",2,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F K132W Y178S",3
"lib2","SARS-CoV-2","TAGATTGTCATCTCCG",4,159.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C6E K56N Y175V",3
"lib2","SARS-CoV-2","TAGATTGTTATCACAG",7,21.6,6,-4.84,1.13,3,1.13,0,">1 nonsynonymous","V11S A33T D68N L122S I142Q",5
"lib2","SARS-CoV-2","TAGATTTAGTGAATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","C49T K87S T100V S113A Q144*",5
"lib2","SARS-CoV-2","TAGATTTATCCAATGA",1,24.1,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","R16P W23R Y121Q",3
"lib2","SARS-CoV-2","TAGATTTCAAAGCAAT",1,39.13,10.84,0.01,0.05,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTTCCAGACATC",7,43.58,9.84,-1,0.09,2.39,1.12,0,">1 nonsynonymous","A22T A42I P149R",3
"lib2","SARS-CoV-2","TAGATTTCCGTACAAA",1,6.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11D V20P L38R T55H L95S I104M",6
"lib2","SARS-CoV-2","TAGATTTCTAGTAGTT",10,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M C31L Q84T D112N Y121L",5
"lib2","SARS-CoV-2","TAGATTTGGGTGATGT",14,76.38,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A81T C158V",2
"lib2","SARS-CoV-2","TAGATTTGTCTGTAAA",2,29.28,10.89,0.06,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGATTTTATAAGGAC",7,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y D98P C102K E141A G146A E154A G172C",7
"lib2","SARS-CoV-2","TAGATTTTGGAGTTAT",5,44.97,6,-4.84,0.61,2.28,1.17,0.01,">1 nonsynonymous","N64S F70N",2
"lib2","SARS-CoV-2","TAGCAAAAATGATTCT",2,13.8,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K94N F99I",2
"lib2","SARS-CoV-2","TAGCAAAACCGGAAAT",10,68.1,6,-4.84,0.74,1.5,1.09,0,">1 nonsynonymous","E10T R25T C61G S108N",4
"lib2","SARS-CoV-2","TAGCAAAAGACTGAAT",2,33.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y121V D137S P149S",3
"lib2","SARS-CoV-2","TAGCAAAAGGATTGAC",2,15.82,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C6I V37I C49W V180A",4
"lib2","SARS-CoV-2","TAGCAAAATAACAAGT",9,17.85,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F47Y K56W F62D Y165C",4
"lib2","SARS-CoV-2","TAGCAAAATAGTAGCC",7,87.09,9.7,-1.13,0.09,2.03,1.08,0,">1 nonsynonymous","V37S A81H Y91F N120V",4
"lib2","SARS-CoV-2","TAGCAAACCGAATTTG",5,74.63,10.51,-0.33,0.06,2.88,1.12,0,">1 nonsynonymous","A14Q P54V C61T A190T",4
"lib2","SARS-CoV-2","TAGCAAACCGTTTTAA",5,59.79,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C61I G146P V153K Y159C",4
"lib2","SARS-CoV-2","TAGCAAAGCAAACCTT",3,81,10.84,0,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCAAAGGTCTCTAA",1,52.52,7.15,-3.69,0.18,1.5,1.07,0.01,">1 nonsynonymous","T15K D112S S147K",3
"lib2","SARS-CoV-2","TAGCAAATAGGAAAAT",5,138.74,10.77,-0.07,0.05,2.95,1.06,0,">1 nonsynonymous","L5Q Y50F",2
"lib2","SARS-CoV-2","TAGCAAATCCTTCAAA",10,125.97,9.91,-0.93,0.06,2.21,1.03,0,"1 nonsynonymous","G51I",1
"lib2","SARS-CoV-2","TAGCAAATTAAATCGT",6,0.84,NA,NA,NA,NA,NA,NA,"stop","G51* D98S",2
"lib2","SARS-CoV-2","TAGCAACAACTGTAAA",1,32.07,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R27C F44I N107Y V153N",4
"lib2","SARS-CoV-2","TAGCAACAAGAGAAGG",2,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L A89V V173L Q176P",4
"lib2","SARS-CoV-2","TAGCAACACCACCGGG",1,8.81,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15F F167S V180L",3
"lib2","SARS-CoV-2","TAGCAACAGACTAATG",11,179.85,10.29,-0.55,0.03,2.88,1.04,0,">1 nonsynonymous","D98G V103I",2
"lib2","SARS-CoV-2","TAGCAACGCACAACAG",2,232.87,10.51,-0.33,0.04,2.93,1.05,0,">1 nonsynonymous","T3Y L60T",2
"lib2","SARS-CoV-2","TAGCAACGTAATGAGG",11,26.52,6.56,-4.28,0.7,1.5,1.28,0.03,">1 nonsynonymous","A42P P82W",2
"lib2","SARS-CoV-2","TAGCAACTCTTATCCT",1,14.66,10.79,-0.04,0.15,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCAACTTTATCAGC",3,29.44,6.27,-4.57,0.43,1.5,1.17,0.01,">1 nonsynonymous","W106T R127S Y175H",3
"lib2","SARS-CoV-2","TAGCAAGAGATGAACA",3,122.4,9.48,-1.36,0.1,2.15,1.1,0,">1 nonsynonymous","P7Q T46H N107P S129F S139A",5
"lib2","SARS-CoV-2","TAGCAAGAGATTACCC",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H C102K G155D",3
"lib2","SARS-CoV-2","TAGCAAGCGAGGGACT",2,77.81,10.72,-0.11,0.03,2.95,1.06,0,">1 nonsynonymous","F44Y K128R",2
"lib2","SARS-CoV-2","TAGCAAGGAAAAACTA",3,36.25,8.93,-1.91,0.22,1.5,1.1,0.02,">1 nonsynonymous","A18W N92S",2
"lib2","SARS-CoV-2","TAGCAAGGACCACCGA",4,59.13,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R27D F44T S139V F167K L188N",5
"lib2","SARS-CoV-2","TAGCAAGTAAGCAGAA",1,199.28,10.21,-0.63,0.02,2.9,1,0,">1 nonsynonymous","N30R S129C N151M",3
"lib2","SARS-CoV-2","TAGCAAGTTCACCGCG",8,99.38,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V11L T46I G172T",3
"lib2","SARS-CoV-2","TAGCAATAGAAACATA",8,60.54,9.23,-1.61,0.08,1.75,1.07,0,">1 nonsynonymous","R27K I104Q",2
"lib2","SARS-CoV-2","TAGCAATATAAGTACT",3,34.91,10.79,-0.04,0.07,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCAATATAATTATT",1,26.37,8.64,-2.19,0.16,2.81,1.18,0.01,"1 nonsynonymous","Q176E",1
"lib2","SARS-CoV-2","TAGCAATCCTATATAT",1,4.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P D112T P161T",3
"lib2","SARS-CoV-2","TAGCAATGAGTTACAT",2,69.91,8.68,-2.16,0.11,2.67,1.09,0,">1 nonsynonymous","V37R Y143C",2
"lib2","SARS-CoV-2","TAGCAATGCATGAGAA",1,14.99,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","N1I N40I Y66S W106M",4
"lib2","SARS-CoV-2","TAGCAATGGATCACTT",9,122.67,10.41,-0.42,0.04,2.92,1.06,0,">1 nonsynonymous","C61S T85V P149M",3
"lib2","SARS-CoV-2","TAGCAATTAAAGATAA",3,25.27,10.72,-0.12,0.09,2.87,1.14,0,"1 nonsynonymous","T85F",1
"lib2","SARS-CoV-2","TAGCAATTTACAGCCG",3,43.39,8.24,-2.6,0.14,1.66,1.15,0.01,">1 nonsynonymous","T55C Y91G N151D",3
"lib2","SARS-CoV-2","TAGCACAAACCACTTT",1,1.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5E G86S A105N I138P",4
"lib2","SARS-CoV-2","TAGCACAACGTACGGT",2,59.31,9.04,-1.8,0.09,2.64,1.11,0,">1 nonsynonymous","D97S K114P P149S",3
"lib2","SARS-CoV-2","TAGCACAACTCAGTAT",3,12.77,6,-4.84,2,3,1.05,0,">1 nonsynonymous","G9L S29L S43V L60T G83C P133R S139I",7
"lib2","SARS-CoV-2","TAGCACAATACATGTA",8,63.09,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L57S V77R E141F F167E",4
"lib2","SARS-CoV-2","TAGCACACCATAAATA",1,26.78,10.77,-0.07,0.07,2.8,1.2,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCACACTCACAATG",3,47.44,10.68,-0.16,0.07,2.84,1.16,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","TAGCACACTTTCCATA",14,44.77,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V103S G152H G155C",3
"lib2","SARS-CoV-2","TAGCACAGACTATCTT",3,0,NA,NA,NA,NA,NA,NA,"stop","I104G R127V I138T G155I S184*",5
"lib2","SARS-CoV-2","TAGCACAGATTTTATG",10,66.7,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G101M S139Y P149T C158V",4
"lib2","SARS-CoV-2","TAGCACAGCTACATTT",6,124.3,10.63,-0.21,0.04,2.94,1.07,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","TAGCACAGGAGTTCAA",1,29.35,9.04,-1.8,0.14,2.65,1.21,0.01,">1 nonsynonymous","P161T T201Y",2
"lib2","SARS-CoV-2","TAGCACAGTAAATTAG",3,33.03,9.74,-1.09,0.14,2.42,1.1,0.01,">1 nonsynonymous","A33N T46C",2
"lib2","SARS-CoV-2","TAGCACAGTTTATTAA",14,161.95,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","R27F S36W W106T S113I C150Y G174Y L188M",7
"lib2","SARS-CoV-2","TAGCACATAAAGGCGC",8,96.06,6.18,-4.65,0.41,1.5,1.16,0,">1 nonsynonymous","W106A L122W Y143T",3
"lib2","SARS-CoV-2","TAGCACATTCCCAGGG",3,53.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17Q K114T D137N",3
"lib2","SARS-CoV-2","TAGCACCAAAGAAATT",2,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86K F126T F167V",3
"lib2","SARS-CoV-2","TAGCACCACTCAAGAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","V37* I80M N92Q T100F",4
"lib2","SARS-CoV-2","TAGCACCACTCACATT",3,77.14,10.61,-0.23,0.04,2.9,1.09,0,">1 nonsynonymous","C61L T148I",2
"lib2","SARS-CoV-2","TAGCACCCAGAACCTG",4,137.37,10.9,0.06,0.06,2.95,1.07,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","TAGCACCGATATAAAC",9,1.58,NA,NA,NA,NA,NA,NA,"stop","E10A V32Q V103*",3
"lib2","SARS-CoV-2","TAGCACCGGACGCTTG",3,6.48,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","S41V K48V C150V",3
"lib2","SARS-CoV-2","TAGCACCTACCTAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* V37F",2
"lib2","SARS-CoV-2","TAGCACCTGATAACAA",1,46.99,10.48,-0.36,0.05,2.98,1.04,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","TAGCACCTGTGTAATC",12,5.33,NA,NA,NA,NA,NA,NA,"stop","A33L L60* I138V G155H P177R",5
"lib2","SARS-CoV-2","TAGCACGATCAACCTA",4,15.91,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","R16I L57T G74N P96L N151L",5
"lib2","SARS-CoV-2","TAGCACGTAATTAATT",11,55.38,6,-4.84,2,1.5,1.25,0.01,"1 nonsynonymous","V20R",1
"lib2","SARS-CoV-2","TAGCACTAAAGTATAA",6,47.56,6.28,-4.56,0.59,1.5,1.2,0.02,">1 nonsynonymous","S19K L57S",2
"lib2","SARS-CoV-2","TAGCACTCAAGAAGCT",8,63.09,9.45,-1.39,0.11,1.97,1.05,0,">1 nonsynonymous","K94L L122F",2
"lib2","SARS-CoV-2","TAGCACTCCATTCAAT",2,22.41,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","R78I A81G N107S Y121T F185T P197M",6
"lib2","SARS-CoV-2","TAGCACTCTATTCAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94V L131F",2
"lib2","SARS-CoV-2","TAGCACTGACATTGCC",1,29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22V V32S D112H",3
"lib2","SARS-CoV-2","TAGCACTGATAACTAC",7,324.09,8.28,-2.56,0.11,2.3,1.08,0,">1 nonsynonymous","W106R L125R N151D",3
"lib2","SARS-CoV-2","TAGCACTTGTGCCGTA",5,337.55,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5F F167S Y178R",3
"lib2","SARS-CoV-2","TAGCAGAATAGAAAAA",2,16.3,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","I28G K114D Y123P G155I",4
"lib2","SARS-CoV-2","TAGCAGACAGGTGTAC",4,59.76,10.61,-0.23,0.04,2.92,1.1,0,">1 nonsynonymous","L38V S129K",2
"lib2","SARS-CoV-2","TAGCAGATAATCCAAA",11,128.05,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41A A89G V153A Y175S",4
"lib2","SARS-CoV-2","TAGCAGATACCAACAT",1,26.17,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","S36E N120I A145K T170L Y178L",5
"lib2","SARS-CoV-2","TAGCAGATGCCTACTG",12,6.2,NA,NA,NA,NA,NA,NA,"stop","S36E F134S C158* V180I",4
"lib2","SARS-CoV-2","TAGCAGATTAAGCGAC",9,26.72,6.43,-4.41,0.37,1.5,1.05,0.01,">1 nonsynonymous","S29N L95S W106A Y143F C150S",5
"lib2","SARS-CoV-2","TAGCAGCCTAAAGCGA",9,446.65,6.24,-4.6,0.49,1.5,1.16,0.01,">1 nonsynonymous","N4L Y35K Y119L",3
"lib2","SARS-CoV-2","TAGCAGCGCGACAGTT",8,30.26,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I2R S41T L60S V103S K114V L131T T148K Q168P",8
"lib2","SARS-CoV-2","TAGCAGCTACACAAGT",5,24.99,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T63I D68E F99T S139N G146L G152L",6
"lib2","SARS-CoV-2","TAGCAGGACTTTCACA",2,6.36,10.84,0.01,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCAGGTCTCCAATG",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S V181P",2
"lib2","SARS-CoV-2","TAGCAGTATAAGAGTT",2,9.54,6.62,-4.21,0.43,1.5,1.08,0.03,">1 nonsynonymous","A33L T85L D90S P133L T201Y",5
"lib2","SARS-CoV-2","TAGCAGTCTCAAAGTC",1,4.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A S139R",2
"lib2","SARS-CoV-2","TAGCAGTGATATAAAG",1,63.12,10.86,0.03,0.03,2.96,1.06,0,"1 nonsynonymous","N110K",1
"lib2","SARS-CoV-2","TAGCAGTGGTTATATA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","S43L G86* Y91C",3
"lib2","SARS-CoV-2","TAGCAGTTATGTCGTG",13,224.11,10.5,-0.33,0.04,2.83,1.06,0,">1 nonsynonymous","N64R S147Y G196M T201K",4
"lib2","SARS-CoV-2","TAGCAGTTCCCGTCCT",2,22.78,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G51S N92S G116S P149S N157S",5
"lib2","SARS-CoV-2","TAGCAGTTCTCAAGGC",2,4.06,NA,NA,NA,NA,NA,NA,"stop","Q163K V173H T201*",3
"lib2","SARS-CoV-2","TAGCATAAAATTTACC",5,84.38,10.54,-0.3,0.05,2.88,1.11,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","TAGCATAAACCTTGGT",1,47.94,9.37,-1.47,0.1,2.75,1.04,0,">1 nonsynonymous","G83V K87Q",2
"lib2","SARS-CoV-2","TAGCATAAATGAACAG",17,7.76,NA,NA,NA,NA,NA,NA,"stop","D34* K87Q",2
"lib2","SARS-CoV-2","TAGCATAATAAACATA",3,42.3,6.88,-3.95,0.28,1.5,1.16,0.02,">1 nonsynonymous","L5G N13I T85S Y143I",4
"lib2","SARS-CoV-2","TAGCATACACACAGGG",1,41.39,8.41,-2.42,0.09,2.28,1.06,0,">1 nonsynonymous","S41G N64S A105V N110S Y119S N171S",6
"lib2","SARS-CoV-2","TAGCATACCGACACCT",6,0.85,NA,NA,NA,NA,NA,NA,"stop","I28* K56P V65T",3
"lib2","SARS-CoV-2","TAGCATATAACCCAAC",2,147.24,10.24,-0.6,0.03,2.87,1.06,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","TAGCATATATTAAAAA",5,16.05,6.1,-4.74,0.91,1.5,1.08,0.02,">1 nonsynonymous","E10V K56L V77F",3
"lib2","SARS-CoV-2","TAGCATATGGCTACGG",1,18.93,10.76,-0.08,0.05,2.96,1.06,0,">1 nonsynonymous","T3A N110T",2
"lib2","SARS-CoV-2","TAGCATCAAAATTATG",13,222.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N58K C61R I80R K94I N157K Q176M",6
"lib2","SARS-CoV-2","TAGCATCACACTCGTG",3,28.52,9.82,-1.01,0.1,2.53,1.01,0.01,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","TAGCATCAGGCTATTG",4,0.18,NA,NA,NA,NA,NA,NA,"stop","W106V C150*",2
"lib2","SARS-CoV-2","TAGCATCCAAAATTTG",6,97.57,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T100Q K128S Q144K P177L",4
"lib2","SARS-CoV-2","TAGCATCCATCGACAA",2,73.68,10.83,-0.01,0.07,2.93,1.1,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","TAGCATCCGATCACCA",7,146.7,11,0.16,0.06,2.97,1.04,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","TAGCATCGTCCGCCCT",2,15.84,6,-4.84,0.38,3,1.06,0,">1 nonsynonymous","Y50M L122H Q144R V173G",4
"lib2","SARS-CoV-2","TAGCATCTATGGGTAT",18,73.6,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T100W G101C C102F E154C Q168F",5
"lib2","SARS-CoV-2","TAGCATCTCGAATCAC",3,25.03,10.51,-0.33,0.06,3,1.01,0,">1 nonsynonymous","T3F K48A",2
"lib2","SARS-CoV-2","TAGCATGCATAGACTT",1,8.37,10.11,-0.73,0.56,2.25,1,0.01,">1 nonsynonymous","S43P C61S V71L K132D S147P",5
"lib2","SARS-CoV-2","TAGCATGCTCCAATAA",8,100.23,10.82,-0.02,0.05,2.92,1.1,0,"1 nonsynonymous","S129H",1
"lib2","SARS-CoV-2","TAGCATGGAAGTGAAA",3,2.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q79M",1
"lib2","SARS-CoV-2","TAGCATGGAATAAATC",1,18,6,-4.84,2,3,1.24,0.02,">1 nonsynonymous","E10N D59Y P82A L122G H189S",5
"lib2","SARS-CoV-2","TAGCATGTCACGAAAC",4,0,NA,NA,NA,NA,NA,NA,"stop","A42V G86Y F99T A105Y K114* E141S",6
"lib2","SARS-CoV-2","TAGCATGTTGAACGTA",2,0.94,NA,NA,NA,NA,NA,NA,"stop","F12S Y39S G83D D90* D112K P197S",6
"lib2","SARS-CoV-2","TAGCATGTTTGATTTA",3,80.74,10.85,0.02,0.06,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCATTAGCATATAA",12,135.1,10.72,-0.11,0.07,2.88,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCATTAGTGTTAAG",5,94.11,10.75,-0.08,0.05,2.96,1.05,0,"1 nonsynonymous","D59G",1
"lib2","SARS-CoV-2","TAGCATTCCAATCGGG",4,15.54,11.06,0.23,0.07,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCATTCTAAATGAC",3,113.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11Y N40F F47S D90H D97F",5
"lib2","SARS-CoV-2","TAGCATTTCCTCAATA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L C49M P133Y N171H",4
"lib2","SARS-CoV-2","TAGCATTTCTAACTAT",3,88.82,9.45,-1.39,0.08,2.79,1.04,0,">1 nonsynonymous","T55S N107D",2
"lib2","SARS-CoV-2","TAGCATTTGAACTGAT",1,1.13,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TAGCCAAAAGCGGCCA",3,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20M F44D C61N D98Y",4
"lib2","SARS-CoV-2","TAGCCAAACGTACTTA",6,52.63,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","P7T A22S S41G Y50I L162T",5
"lib2","SARS-CoV-2","TAGCCAAACTTTGCCT",2,41.86,10.9,0.06,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCCAACCCGCGTTG",6,38.87,10.42,-0.42,0.06,2.81,1.12,0,"1 nonsynonymous","R136C",1
"lib2","SARS-CoV-2","TAGCCAACCTTAGACG",5,29.11,10.28,-0.55,0.06,2.94,1.11,0,"1 nonsynonymous","A33K",1
"lib2","SARS-CoV-2","TAGCCAACGGGACTTC",1,67.4,8.35,-2.48,0.11,2.94,1.02,0,">1 nonsynonymous","N130F Y175Q",2
"lib2","SARS-CoV-2","TAGCCAAGTCCCACCC",4,76.15,10.8,-0.04,0.05,2.94,1.04,0,"1 nonsynonymous","D98E",1
"lib2","SARS-CoV-2","TAGCCAATAAAAAAGA",2,5.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F134C",1
"lib2","SARS-CoV-2","TAGCCAATACACCGCA",7,119.45,10.71,-0.13,0.03,2.9,1.1,0,">1 nonsynonymous","F62M P149L T201I",3
"lib2","SARS-CoV-2","TAGCCACAAGAATATT",1,62.37,10.86,0.02,0.04,2.9,1.09,0,"1 nonsynonymous","G9S",1
"lib2","SARS-CoV-2","TAGCCACAAGGCCCAA",10,82.51,10.26,-0.58,0.07,2.62,1.03,0,">1 nonsynonymous","L5I E135F",2
"lib2","SARS-CoV-2","TAGCCACGGGTTTGAA",2,12.08,6.44,-4.39,0.28,1.87,1.06,0,">1 nonsynonymous","L122Q R127T Y159F",3
"lib2","SARS-CoV-2","TAGCCACTTAAGCATT",4,9.08,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","A42W L95P L131Y P149I K199Y",5
"lib2","SARS-CoV-2","TAGCCACTTTGTCCGA",1,54.63,9.97,-0.87,0.08,2.38,1.05,0,">1 nonsynonymous","E10F Y39A K48Q T85S",4
"lib2","SARS-CoV-2","TAGCCAGAATAAGAAG",1,12.44,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C6L P133L",2
"lib2","SARS-CoV-2","TAGCCAGTGCCTGAAA",2,57.81,7.65,-3.19,0.26,1.5,1.14,0.02,">1 nonsynonymous","K48E C150G",2
"lib2","SARS-CoV-2","TAGCCATAAAAAACAT",1,9.2,8.16,-2.68,0.22,1.95,1.04,0.02,">1 nonsynonymous","C31Y D59R Y91M",3
"lib2","SARS-CoV-2","TAGCCATAAATTATTA",2,9.54,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G9V D112N G146V G174M",4
"lib2","SARS-CoV-2","TAGCCATAAATTCGAA",12,182.66,8.64,-2.2,0.17,1.5,1.09,0.01,">1 nonsynonymous","W23E K198E",2
"lib2","SARS-CoV-2","TAGCCATAGAATGATT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P Y50D F70L D90R A105S S147G",6
"lib2","SARS-CoV-2","TAGCCATAGCCAGTTT",8,68.31,9.26,-1.57,0.14,1.5,1.04,0.01,">1 nonsynonymous","F8S Q163W",2
"lib2","SARS-CoV-2","TAGCCATCACATTAGG",2,38.84,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V11R Y21T G86C K198I",4
"lib2","SARS-CoV-2","TAGCCATCGCTTTGTG",5,1.53,NA,NA,NA,NA,NA,NA,"stop","K48Y F62M D68* F160R G166V V173C",6
"lib2","SARS-CoV-2","TAGCCATCTGCATTCA",9,20.72,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V103D E141L P177S",3
"lib2","SARS-CoV-2","TAGCCATGGTATCCTT",10,8.02,6.43,-4.41,1.61,3,1.13,0.01,">1 nonsynonymous","A42N I72Y Y143D Y165L R179W",5
"lib2","SARS-CoV-2","TAGCCCAAATGTACCT",2,20.25,9,-1.83,0.22,1.5,1.08,0.03,">1 nonsynonymous","V11L V181Y",2
"lib2","SARS-CoV-2","TAGCCCAAGGTTTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5D N151A",2
"lib2","SARS-CoV-2","TAGCCCACATGTAGAT",1,62.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10S S19E F44A Q176R",4
"lib2","SARS-CoV-2","TAGCCCACCCCTCCAA",5,0.47,NA,NA,NA,NA,NA,NA,"stop","R27* G166A",2
"lib2","SARS-CoV-2","TAGCCCACTCATTGAT",6,34.58,9.28,-1.56,0.14,1.52,1.09,0.01,">1 nonsynonymous","R25K G196S",2
"lib2","SARS-CoV-2","TAGCCCAGCTACGACC",9,189.92,10.62,-0.21,0.03,2.9,1.07,0,">1 nonsynonymous","C6D Q168Y",2
"lib2","SARS-CoV-2","TAGCCCAGTCCCTACA",5,122.49,9.11,-1.72,0.04,2.89,1.13,0,">1 nonsynonymous","K56M G117E",2
"lib2","SARS-CoV-2","TAGCCCATTATTACGC",3,80.97,10.63,-0.2,0.07,2.87,1.04,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","TAGCCCCATTGCAACC",7,197.31,10.2,-0.64,0.05,2.46,1.02,0,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","TAGCCCCCATGTCATA",6,99.13,10.79,-0.04,0.05,2.95,1.06,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","TAGCCCCCGATCGACT",11,210.21,10.2,-0.64,0.03,2.94,1.04,0,">1 nonsynonymous","K87N D98T I104Y",3
"lib2","SARS-CoV-2","TAGCCCCGGCCTTATG",1,25.31,10.94,0.1,0.12,2.84,1.16,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCCCGAAGCAACCA",1,50.12,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","S139V Y159S",2
"lib2","SARS-CoV-2","TAGCCCGAGCGACAAA",1,11.91,10.7,-0.13,0.09,2.95,1.05,0,">1 nonsynonymous","T15S K26L",2
"lib2","SARS-CoV-2","TAGCCCGCCCTGAGCA",5,27.02,6,-4.84,1.03,3,1.13,0.01,">1 nonsynonymous","I88D K128A G152N",3
"lib2","SARS-CoV-2","TAGCCCGGCACTAACC",2,11.91,6.18,-4.66,0.54,2.48,1.21,0.01,">1 nonsynonymous","T3V G152R C158T K198A",4
"lib2","SARS-CoV-2","TAGCCCGGGTTACCAC",6,18.99,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G51Y V103F",2
"lib2","SARS-CoV-2","TAGCCCGTCTGTAAAG",2,7.88,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A22N K94D G117A F126R T140S",5
"lib2","SARS-CoV-2","TAGCCCTATTATTGCG",11,126.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W23P V103L L122P",3
"lib2","SARS-CoV-2","TAGCCCTCAAGGATAA",3,6.54,NA,NA,NA,NA,NA,NA,"stop","F12* W106L Y119L",3
"lib2","SARS-CoV-2","TAGCCCTTATAAATAC",2,39.67,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T3G A22G Y165T H189V",4
"lib2","SARS-CoV-2","TAGCCCTTCAAAACAG",4,92.82,10.38,-0.45,0.04,2.87,1.13,0,">1 nonsynonymous","L5Q F44A C61V",3
"lib2","SARS-CoV-2","TAGCCGACACCCAGGT",1,10.2,10.35,-0.48,0.05,3,1.04,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","TAGCCGATAAAAGAGT",8,71.94,10.79,-0.05,0.04,2.95,1.05,0,">1 nonsynonymous","D98L L122R",2
"lib2","SARS-CoV-2","TAGCCGCCCTACTACT",1,23.44,9,-1.84,0.07,2.83,1.01,0,">1 nonsynonymous","D97R Y119N E135R P197K",4
"lib2","SARS-CoV-2","TAGCCGCGACCCTGCT",1,10.47,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55E A81Q G86Y E141D E154T",5
"lib2","SARS-CoV-2","TAGCCGCGGGTTGTTA",11,4.63,NA,NA,NA,NA,NA,NA,"stop","A14* Y119R G174V",3
"lib2","SARS-CoV-2","TAGCCGGCAACAATCC",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V D75L",2
"lib2","SARS-CoV-2","TAGCCGTAAACATGAA",4,20.37,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y50T G86Y",2
"lib2","SARS-CoV-2","TAGCCTAAACACATGC",4,92.23,10.86,0.02,0.02,2.94,1.06,0,"1 nonsynonymous","I2R",1
"lib2","SARS-CoV-2","TAGCCTAAATTCGAGT",8,122.98,10.63,-0.21,0.03,2.96,1.04,0,"1 nonsynonymous","A18K",1
"lib2","SARS-CoV-2","TAGCCTAAGGAACTCA",2,25.98,10.73,-0.1,0.05,2.95,1.04,0,">1 nonsynonymous","N4M S200D",2
"lib2","SARS-CoV-2","TAGCCTAATAGAGTCG",6,5.53,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","I104S P133Y",2
"lib2","SARS-CoV-2","TAGCCTACCGATAATC",1,19.53,9.3,-1.53,0.07,2.96,1.12,0,">1 nonsynonymous","T3L Y39Q T170N",3
"lib2","SARS-CoV-2","TAGCCTACGTTTTGTT",4,120.9,10.25,-0.58,0.04,2.98,1.03,0,">1 nonsynonymous","G174L A190R",2
"lib2","SARS-CoV-2","TAGCCTAGATTGAAAT",4,72.7,9.73,-1.11,0.09,2.06,1.08,0,">1 nonsynonymous","S45V D98L",2
"lib2","SARS-CoV-2","TAGCCTAGTAATATTA",18,210.82,9.56,-1.27,0.07,2.09,1.09,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TAGCCTATGCCAGTAT",3,12.26,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","N4L P82S T148V",3
"lib2","SARS-CoV-2","TAGCCTCACCCACAGC",2,40.9,9.28,-1.55,0.07,2.84,1.12,0,">1 nonsynonymous","S139T G166Q",2
"lib2","SARS-CoV-2","TAGCCTCAGAACTAAA",3,9.51,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","F99C N151M",2
"lib2","SARS-CoV-2","TAGCCTCAGAGGACCT",4,32.05,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F134L F167G",2
"lib2","SARS-CoV-2","TAGCCTCCAGCAATTA",3,42.64,8.99,-1.85,0.09,2.2,1.03,0,">1 nonsynonymous","N64Q D112L",2
"lib2","SARS-CoV-2","TAGCCTCGCAGAAAAA",5,147,6.11,-4.72,0.69,1.5,1.2,0.02,">1 nonsynonymous","Y119R P177G",2
"lib2","SARS-CoV-2","TAGCCTGATTACGAAA",9,136.17,6.03,-4.81,1.25,1.5,1.22,0.02,">1 nonsynonymous","A22P C102L G174L",3
"lib2","SARS-CoV-2","TAGCCTGGCGGCTTGC",3,14.51,7.31,-3.53,0.31,1.5,1.03,0.04,">1 nonsynonymous","N1K C6F N118I",3
"lib2","SARS-CoV-2","TAGCCTGGGATTCTCC",7,67.22,10.8,-0.03,0.04,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCCTGTGGAGGTTG",10,45.35,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A42E P82V R124V E141N P149M",5
"lib2","SARS-CoV-2","TAGCCTGTTACCAGCA",4,1636.75,6.27,-4.57,0.2,1.5,1.09,0,">1 nonsynonymous","V115A C150V C158Y",3
"lib2","SARS-CoV-2","TAGCCTGTTGAACTAG",3,90.56,10.87,0.03,0.04,2.96,1.05,0,">1 nonsynonymous","Y39I K132I",2
"lib2","SARS-CoV-2","TAGCCTTACATCTGAT",11,180.84,10.17,-0.67,0.05,2.69,1.07,0,"1 nonsynonymous","D34V",1
"lib2","SARS-CoV-2","TAGCGAAACGTACTGT",3,17.36,6.08,-4.76,0.74,1.5,1.1,0.01,">1 nonsynonymous","K48H C158T",2
"lib2","SARS-CoV-2","TAGCGAAACGTTAAAT",8,153.1,9.03,-1.81,0.04,2.88,1.08,0,">1 nonsynonymous","K87D G116R",2
"lib2","SARS-CoV-2","TAGCGAAATCGTACAG",6,83.97,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","A22I F99Y Y119E",3
"lib2","SARS-CoV-2","TAGCGAACATAAAAGT",1,87.49,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23L S113C",2
"lib2","SARS-CoV-2","TAGCGAACATTAAAAC",1,1.8,NA,NA,NA,NA,NA,NA,"stop","C61* W106H P133F Y165K V181L",5
"lib2","SARS-CoV-2","TAGCGAACCGCGGATC",8,4.95,NA,NA,NA,NA,NA,NA,"stop","A22* N64I G83N L122R R136I",5
"lib2","SARS-CoV-2","TAGCGAAGTCTGACCA",4,53.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68W L122S",2
"lib2","SARS-CoV-2","TAGCGAAGTTGCTACA",18,86.95,6.21,-4.63,0.81,1.5,1.24,0.03,">1 nonsynonymous","F12T L60R V77M",3
"lib2","SARS-CoV-2","TAGCGAATAACTATAG",3,42.78,10.94,0.1,0.07,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TAGCGAATAAGATTTG",3,21.26,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14M F99I N120S P133W",4
"lib2","SARS-CoV-2","TAGCGAATACATAAGC",5,83.31,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S69M F167R S184Y K198E",4
"lib2","SARS-CoV-2","TAGCGAATACCCTAAC",7,72.73,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25F L60S E141Y",3
"lib2","SARS-CoV-2","TAGCGAATGTAAGGAC",5,0.79,NA,NA,NA,NA,NA,NA,"stop","S41V K87* D97S",3
"lib2","SARS-CoV-2","TAGCGACAAACCGTGA",1,21.6,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y93S G172K",2
"lib2","SARS-CoV-2","TAGCGACAATAAGTCA",4,53.67,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","E76S G86L F156Q",3
"lib2","SARS-CoV-2","TAGCGACTAACGACAA",3,59.54,9.94,-0.9,0.04,2.81,1.01,0,">1 nonsynonymous","C6F A14S K199V",3
"lib2","SARS-CoV-2","TAGCGAGAAATACACA",4,93.47,10.68,-0.16,0.02,2.89,1.12,0,">1 nonsynonymous","L60Y S129L",2
"lib2","SARS-CoV-2","TAGCGAGACACCTTAC",14,104.7,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8P T46S D59L N120R G152P L162S",6
"lib2","SARS-CoV-2","TAGCGAGACATCATTT",7,0.09,NA,NA,NA,NA,NA,NA,"stop","A22* G174P A190L",3
"lib2","SARS-CoV-2","TAGCGAGAGCAATTAA",2,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116S R127D I138S Q168L",4
"lib2","SARS-CoV-2","TAGCGAGCTTGAAGGG",2,18.48,10.8,-0.03,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCGAGGACTGAGCA",10,69.24,10.57,-0.27,0.05,2.88,1.1,0,">1 nonsynonymous","I28F V173S",2
"lib2","SARS-CoV-2","TAGCGATAAATATTGC",3,5.49,8.87,-1.96,0.49,1.5,1,0.05,">1 nonsynonymous","F99W V103K",2
"lib2","SARS-CoV-2","TAGCGATGCGATTCGG",6,12.14,8.64,-2.2,0.18,1.69,1.07,0.01,"1 nonsynonymous","A67R",1
"lib2","SARS-CoV-2","TAGCGCAATTGTGTTA",1,139.44,9.35,-1.49,0.05,2.93,1.07,0,">1 nonsynonymous","S43D F156V P169H",3
"lib2","SARS-CoV-2","TAGCGCAGCATGTTGT",2,7.23,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","D98A",1
"lib2","SARS-CoV-2","TAGCGCATAAAGGGCT",8,68.04,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D68R K87T",2
"lib2","SARS-CoV-2","TAGCGCCCCGCCAACC",6,31.27,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","P54E D68W Y121E",3
"lib2","SARS-CoV-2","TAGCGCGACTAAACGG",10,63.38,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L125S F134R G146L",3
"lib2","SARS-CoV-2","TAGCGCGATCCAATAC",4,24.3,8.76,-2.07,0.14,1.92,1.08,0.01,">1 nonsynonymous","C61T G83I G116W",3
"lib2","SARS-CoV-2","TAGCGCGCGAGATGAA",19,2.32,NA,NA,NA,NA,NA,NA,"stop","T55D Q79* S113V",3
"lib2","SARS-CoV-2","TAGCGCTAACCTTACT",6,310.08,10.4,-0.44,0.03,2.86,1.06,0,">1 nonsynonymous","D90N D97Q K114Y",3
"lib2","SARS-CoV-2","TAGCGCTCAAATATAA",5,109.2,10.14,-0.7,0.04,2.61,1,0,">1 nonsynonymous","R127K F160C",2
"lib2","SARS-CoV-2","TAGCGGAATCTGCCTA",4,18.29,6,-4.84,1.03,3,1.17,0,">1 nonsynonymous","L5I Y35P T55L E141H P161L T201Y",6
"lib2","SARS-CoV-2","TAGCGGACAATCGGAC",1,31.29,10.84,0,0.07,2.97,1.05,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","TAGCGGGAATCGAGGT",12,258.36,9.99,-0.84,0.06,2.48,1,0,">1 nonsynonymous","K48D A67T",2
"lib2","SARS-CoV-2","TAGCGGGCTAGCCCAT",3,28.69,10.84,0,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCGGGGAGAGATTC",5,17.51,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C31W C49D N92K T201L",4
"lib2","SARS-CoV-2","TAGCGGTAAGCGAGGC",18,334.65,10.45,-0.38,0.03,2.94,1.05,0,">1 nonsynonymous","N58C S129G",2
"lib2","SARS-CoV-2","TAGCGGTGGCTGACCC",11,334.7,9.83,-1.01,0.06,2.29,1.06,0,">1 nonsynonymous","G9A L38R",2
"lib2","SARS-CoV-2","TAGCGGTTAAAGACCA",4,37.96,9.52,-1.32,0.15,2.23,1.11,0.01,">1 nonsynonymous","F8E F160S",2
"lib2","SARS-CoV-2","TAGCGTAACGGACTAC",9,0.75,NA,NA,NA,NA,NA,NA,"stop","V37* N92S S129R T148S S164Q",5
"lib2","SARS-CoV-2","TAGCGTACACCTGCAA",7,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95A S139T S200R",3
"lib2","SARS-CoV-2","TAGCGTAGGAATTCCA",5,2.81,NA,NA,NA,NA,NA,NA,"stop","R25* D98L",2
"lib2","SARS-CoV-2","TAGCGTATAAAACGAC",5,56.5,10.36,-0.48,0.03,2.9,1.08,0,"1 nonsynonymous","Y35C",1
"lib2","SARS-CoV-2","TAGCGTATCATTGCCT",16,41.89,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I104R R127L E154Q",3
"lib2","SARS-CoV-2","TAGCGTATCGCGATCG",1,6.9,NA,NA,NA,NA,NA,NA,"stop","N4V T15* Y121L D137Q",4
"lib2","SARS-CoV-2","TAGCGTCCATTCCACT",4,109.82,10.94,0.1,0.05,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCGTCGAATCAAAA",3,107.96,10.81,-0.03,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCGTCTCCTTAACA",4,47.42,6,-4.84,2,3,1.1,0,">1 nonsynonymous","G86T S113T",2
"lib2","SARS-CoV-2","TAGCGTGACTCTGATA",4,1.05,NA,NA,NA,NA,NA,NA,"stop","C31A S41M T85M T201*",4
"lib2","SARS-CoV-2","TAGCGTGAGATCAAAC",11,116.6,8.5,-2.34,0.14,1.5,1.06,0.01,">1 nonsynonymous","C6L I28K",2
"lib2","SARS-CoV-2","TAGCGTTAGGACTATT",3,5.03,10.2,-0.64,0.33,2.07,1,0.04,">1 nonsynonymous","I88V K94N G116T",3
"lib2","SARS-CoV-2","TAGCGTTTGTGAACTA",2,12.23,10.94,0.1,0.09,2.81,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCTAAACCGACAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R C61R D68E N118T S139A",5
"lib2","SARS-CoV-2","TAGCTAAACGGTTTAA",13,43.19,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","A14N P96R N118I",3
"lib2","SARS-CoV-2","TAGCTAACCATTCAAG",5,48.47,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y35V F70I K94E G174L",4
"lib2","SARS-CoV-2","TAGCTAAGAACTTAAG",7,127.87,10.06,-0.78,0.07,2.41,1.04,0,">1 nonsynonymous","N1R T15I",2
"lib2","SARS-CoV-2","TAGCTAAGAAGTTAAA",8,90.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Q79V Y93H",2
"lib2","SARS-CoV-2","TAGCTAAGAATGAACC",6,54.91,6.17,-4.67,0.66,1.5,1.18,0.01,">1 nonsynonymous","K128T Y143N F156C F167Q",4
"lib2","SARS-CoV-2","TAGCTAAGACTAAAAA",9,51.12,9.88,-0.95,0.08,2.06,1.04,0,">1 nonsynonymous","N1I R16W L57M D90N V153L",5
"lib2","SARS-CoV-2","TAGCTAAGCAATCGAA",2,22.18,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","P82M Y93L W106I P149L",4
"lib2","SARS-CoV-2","TAGCTAAGCGGGCGAA",2,52.44,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6V N13Y Y21I Y39M S45L A67L C102L F134N",8
"lib2","SARS-CoV-2","TAGCTAATAAAATAAT",7,1.41,NA,NA,NA,NA,NA,NA,"stop","A22S S29T D112* N157R",4
"lib2","SARS-CoV-2","TAGCTAATTACTCATT",2,0,NA,NA,NA,NA,NA,NA,"stop","T3F L60* F156W",3
"lib2","SARS-CoV-2","TAGCTACAAATGGACG",7,81.58,9.86,-0.98,0.07,2.75,1.04,0,">1 nonsynonymous","K128T G155Y",2
"lib2","SARS-CoV-2","TAGCTACACCCATCCT",1,44.08,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","F167R",1
"lib2","SARS-CoV-2","TAGCTACCTCAGCGGC",4,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S V180H",2
"lib2","SARS-CoV-2","TAGCTACGCCACTGGT",6,22.22,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","A89E W106A",2
"lib2","SARS-CoV-2","TAGCTACTACCAACGC",3,45.96,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","E10C A18R A42E N157R",4
"lib2","SARS-CoV-2","TAGCTACTGGCTGATT",2,5.42,6.53,-4.3,2,1.5,1.17,0.05,">1 nonsynonymous","G152H L183K",2
"lib2","SARS-CoV-2","TAGCTACTTATTTGTG",1,36.91,10.57,-0.27,0.05,2.95,1,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","TAGCTAGAATACAGTA",7,15.51,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1T F99V D112M D137S",4
"lib2","SARS-CoV-2","TAGCTAGTCCTCTGAA",3,21.04,9.95,-0.88,0.16,2.56,1.03,0.01,">1 nonsynonymous","N107S P149R",2
"lib2","SARS-CoV-2","TAGCTATAGACATGCT",9,155.54,7.84,-2.99,0.11,1.5,1.06,0,">1 nonsynonymous","N58M Y119T Q176K K199W",4
"lib2","SARS-CoV-2","TAGCTATAGCAGTACA",7,71.01,8.9,-1.93,0.29,1.5,1,0.04,">1 nonsynonymous","V32L T46S V181Y",3
"lib2","SARS-CoV-2","TAGCTATCATAGTCAA",5,70.06,6.88,-3.96,0.24,1.5,1.11,0.01,">1 nonsynonymous","P7Y I104F Y119L F126Y A190T",5
"lib2","SARS-CoV-2","TAGCTATGCACATCAA",5,52.61,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6T D59I F167L",3
"lib2","SARS-CoV-2","TAGCTATTAAAGCACG",5,41.89,10.24,-0.6,0.04,2.92,1.1,0,">1 nonsynonymous","G9M Q84R K87V T201R",4
"lib2","SARS-CoV-2","TAGCTATTAGCTGAGA",2,32.96,10.53,-0.31,0.08,2.91,1.07,0,">1 nonsynonymous","N1D P54V K87M",3
"lib2","SARS-CoV-2","TAGCTATTCAGAAATT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","S19I N64* L95I S147Y V182G",5
"lib2","SARS-CoV-2","TAGCTATTCGTGCAAG",6,83.87,10.81,-0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCTCAAAGAATACA",14,253.44,8.23,-2.6,0.11,2.03,1.07,0,">1 nonsynonymous","Y119G V182A",2
"lib2","SARS-CoV-2","TAGCTCAACCCTGATG",6,0,NA,NA,NA,NA,NA,NA,"stop","K87* W106P",2
"lib2","SARS-CoV-2","TAGCTCACATGTAAAC",4,27.43,10.51,-0.33,0.08,2.92,1.09,0,">1 nonsynonymous","Y39G D97V",2
"lib2","SARS-CoV-2","TAGCTCACTCTAAACC",1,15.68,9.87,-0.96,0.09,1.97,1.03,0,">1 nonsynonymous","G9P A22R W106Q T201N",4
"lib2","SARS-CoV-2","TAGCTCAGAGCACCTT",6,11.02,10.81,-0.03,0.1,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGCTCAGTCTACTCT",10,189.77,10.56,-0.28,0.04,2.92,1.04,0,">1 nonsynonymous","T140V S184I",2
"lib2","SARS-CoV-2","TAGCTCCAATCGTACG",7,30.42,10.19,-0.65,0.06,2.83,1.02,0,"1 nonsynonymous","L57Q",1
"lib2","SARS-CoV-2","TAGCTCCCTAGAATAG",9,1.96,NA,NA,NA,NA,NA,NA,"stop","Y91* F126C P197R",3
"lib2","SARS-CoV-2","TAGCTCCTACAATACT",4,54.93,9.52,-1.32,0.06,2.65,1.03,0,">1 nonsynonymous","L5A F134C G155D",3
"lib2","SARS-CoV-2","TAGCTCCTGAATTAGT",4,26.75,9.98,-0.85,0.14,2.54,1.15,0.01,">1 nonsynonymous","N58K G152A E186A",3
"lib2","SARS-CoV-2","TAGCTCGCAATTAAAT",7,97.81,10.16,-0.68,0.08,2.5,1.03,0,">1 nonsynonymous","P54G N58A F62E",3
"lib2","SARS-CoV-2","TAGCTCGGGTATGACA",1,10.57,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D90V Y143A V173T",3
"lib2","SARS-CoV-2","TAGCTCTACATGTGCC",2,0,NA,NA,NA,NA,NA,NA,"stop","P7I V65A P96I Y119V E141F Y159F P169*",7
"lib2","SARS-CoV-2","TAGCTCTCGAAGTTAG",7,1.59,NA,NA,NA,NA,NA,NA,"stop","N13M G117*",2
"lib2","SARS-CoV-2","TAGCTCTCTCACTAGT",14,3.98,NA,NA,NA,NA,NA,NA,"stop","G9I R25E N58* F99M K132I L183K",6
"lib2","SARS-CoV-2","TAGCTCTGCAGCCGTG",5,16.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23C S41R N107R",3
"lib2","SARS-CoV-2","TAGCTCTTTTGAAAAT",10,72.42,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","W23V I88A D97L I104F",4
"lib2","SARS-CoV-2","TAGCTGAATATACAAC",11,150.84,10.04,-0.8,0.06,2.46,1.02,0,"1 nonsynonymous","W106I",1
"lib2","SARS-CoV-2","TAGCTGACAGATTCTA",1,15.3,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","S19V S45T F70L I104L",4
"lib2","SARS-CoV-2","TAGCTGAGACGTTAAA",5,53.47,6,-4.84,1.68,3,1.2,0.01,">1 nonsynonymous","Y35L L125K P133D Y165C Y175L",5
"lib2","SARS-CoV-2","TAGCTGATCAACCTTA",4,23.33,9.98,-0.85,0.09,2.47,1,0.01,">1 nonsynonymous","L5R Y35D N58D T201L",4
"lib2","SARS-CoV-2","TAGCTGATCCGTTGTC",2,54.39,7.53,-3.3,0.25,1.5,1.05,0.02,">1 nonsynonymous","I80L Q176L",2
"lib2","SARS-CoV-2","TAGCTGATGCCACTTT",5,8.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N1S C49A L95T N120R A145Y",5
"lib2","SARS-CoV-2","TAGCTGATTTAGACGC",2,1217.63,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y39A Y66R Y91G Y121E",4
"lib2","SARS-CoV-2","TAGCTGCACATTACCT",4,179.04,8.89,-1.95,0.05,2.94,1.1,0,">1 nonsynonymous","L60A E154L G174K",3
"lib2","SARS-CoV-2","TAGCTGCTAAGCTTTA",4,3.49,NA,NA,NA,NA,NA,NA,"stop","L95* G196M",2
"lib2","SARS-CoV-2","TAGCTGCTACTACCAA",11,0.8,NA,NA,NA,NA,NA,NA,"stop","F17* W23N T100L",3
"lib2","SARS-CoV-2","TAGCTGCTCATAAACA",4,49.3,9.81,-1.02,0.1,2.37,1.07,0,">1 nonsynonymous","E10I L183M T201A",3
"lib2","SARS-CoV-2","TAGCTGGACTATACTT",3,15.52,6,-4.84,1.03,3,1.17,0.01,">1 nonsynonymous","D68R D90S D112S G146K P149K C195F",6
"lib2","SARS-CoV-2","TAGCTGTGGCCAATTA",2,39.76,9.2,-1.64,0.06,2.96,1.06,0,"1 nonsynonymous","G117H",1
"lib2","SARS-CoV-2","TAGCTGTTTACCGAGG",6,100.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35A R124V",2
"lib2","SARS-CoV-2","TAGCTTAACATAATAA",5,79.83,10.75,-0.09,0.03,2.97,1.03,0,">1 nonsynonymous","T63R S200C",2
"lib2","SARS-CoV-2","TAGCTTAATCAAGTGG",8,84.39,10.86,0.02,0.06,2.91,1.06,0,">1 nonsynonymous","R16N Y39S",2
"lib2","SARS-CoV-2","TAGCTTAGATGAACGA",21,212.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","T15W S29W Y121C",3
"lib2","SARS-CoV-2","TAGCTTAGCATTCCTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3P G51I R78G D112* Y119M V180R",6
"lib2","SARS-CoV-2","TAGCTTATACACCTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","TAGCTTATTAAATAAG",8,17.14,7.35,-3.49,0.37,1.5,1.06,0.03,">1 nonsynonymous","F17K L95G A192E",3
"lib2","SARS-CoV-2","TAGCTTCAACGAATAG",3,28.35,10.17,-0.67,0.06,2.85,1,0,">1 nonsynonymous","A33R F44P L122K",3
"lib2","SARS-CoV-2","TAGCTTCCTACCTATA",15,1.11,NA,NA,NA,NA,NA,NA,"stop","G51K F134* A190N",3
"lib2","SARS-CoV-2","TAGCTTCCTGACAATT",2,139.24,6.39,-4.45,0.26,1.5,1.12,0,">1 nonsynonymous","D34G F62I N157R",3
"lib2","SARS-CoV-2","TAGCTTCTACTACTAC",6,3.4,NA,NA,NA,NA,NA,NA,"stop","N40P V77S D97S I138W L187S K198*",6
"lib2","SARS-CoV-2","TAGCTTCTGGCCGTCA",3,63.18,10.36,-0.48,0.06,2.84,1.01,0,">1 nonsynonymous","N13R A42D",2
"lib2","SARS-CoV-2","TAGCTTCTGTCTGTTT",4,51.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2T R16G R25L F44Q N110P Q168L",6
"lib2","SARS-CoV-2","TAGCTTGCTCTAGTCC",1,15.4,9.32,-1.51,0.14,2.63,1.01,0.01,">1 nonsynonymous","N107E V194E K198G",3
"lib2","SARS-CoV-2","TAGCTTGGAGATCAAG",4,11.52,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V71P T100F",2
"lib2","SARS-CoV-2","TAGCTTGTCTGCCGCG",7,15.66,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","A42P K48I R78P D90F N130M P149T G155V L162G",8
"lib2","SARS-CoV-2","TAGCTTGTTACTACTA",2,22.99,10.12,-0.72,0.15,2.58,1,0.02,">1 nonsynonymous","N151K V173P",2
"lib2","SARS-CoV-2","TAGCTTTAATACGGTG",1,35.45,9.27,-1.56,0.18,1.61,1.07,0.02,">1 nonsynonymous","R27Q T55S V103L",3
"lib2","SARS-CoV-2","TAGCTTTAGTTGTGTG",3,112.31,10.43,-0.41,0.05,2.88,1.02,0,">1 nonsynonymous","R16W D98V",2
"lib2","SARS-CoV-2","TAGCTTTCAACCACTC",9,114.73,10.2,-0.64,0.04,2.92,1.03,0,">1 nonsynonymous","G155L K199G",2
"lib2","SARS-CoV-2","TAGCTTTCTATAAATG",3,10.49,10.76,-0.08,0.06,2.94,1.08,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","TAGCTTTGAGTTCCAC",5,75.11,6.79,-4.05,0.29,1.5,1.12,0.01,">1 nonsynonymous","F62K R73I",2
"lib2","SARS-CoV-2","TAGCTTTTTGCGCAAG",13,36.01,9.36,-1.48,0.14,1.5,1.12,0.01,">1 nonsynonymous","D34N L60R R136K F185T",4
"lib2","SARS-CoV-2","TAGGAAAAAAAGGGAT",5,33.62,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","S19R N64I P82M K87R",4
"lib2","SARS-CoV-2","TAGGAAAACGTATAAC",10,12.23,NA,NA,NA,NA,NA,NA,"stop","R16L R27I V37G A89V S113P L125T Q176*",7
"lib2","SARS-CoV-2","TAGGAAAAGAAATAAT",12,89.38,6.74,-4.1,0.18,1.5,1.08,0,">1 nonsynonymous","Q144M C158G",2
"lib2","SARS-CoV-2","TAGGAAAAGAATAATT",1,27.83,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36L R73M P82F Y93L F99E",5
"lib2","SARS-CoV-2","TAGGAAAAGTAGTTAG",8,19.68,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","I88Y R124D",2
"lib2","SARS-CoV-2","TAGGAAACAATAAAAG",4,28.6,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14V A33P F70Q Y165F C195F",5
"lib2","SARS-CoV-2","TAGGAAACCCGCATAG",14,62.88,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12I T15A S43Y G51L Y91L D112T",6
"lib2","SARS-CoV-2","TAGGAAACCGAAATGC",6,63.96,10.52,-0.32,0.04,2.88,1.12,0,">1 nonsynonymous","V32S S41A",2
"lib2","SARS-CoV-2","TAGGAAACTTTACATA",1,20.79,6.02,-4.81,0.7,3,1.08,0.01,">1 nonsynonymous","F44N E76G D98P V103D I142S",5
"lib2","SARS-CoV-2","TAGGAAAGCAAATCCT",1,32.38,10.2,-0.63,0.07,2.9,1,0,">1 nonsynonymous","E10R T100V S164N N171S",4
"lib2","SARS-CoV-2","TAGGAAATACACTATA",1,48.23,10.03,-0.8,0.09,2.8,1.04,0,">1 nonsynonymous","V173P L188H",2
"lib2","SARS-CoV-2","TAGGAAATGGTAGAAC",2,18.92,8.67,-2.16,0.2,1.81,1.14,0.02,">1 nonsynonymous","N1K L5N D90S N118Y N151F",5
"lib2","SARS-CoV-2","TAGGAAATTAATATCC",3,16.91,10.83,0,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGAACAAAAAAATT",5,36.04,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2V V20M N58W K87C",4
"lib2","SARS-CoV-2","TAGGAACCTACACGAT",2,17.46,8.84,-2,0.27,1.5,1.09,0.03,">1 nonsynonymous","L60S I88T",2
"lib2","SARS-CoV-2","TAGGAACTCACATGTT",7,36.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41P Y93N T100L H189D",4
"lib2","SARS-CoV-2","TAGGAAGAAAACGTAC",8,124.38,10.33,-0.51,0.05,2.93,1.09,0,"1 nonsynonymous","Y121I",1
"lib2","SARS-CoV-2","TAGGAAGAGTTTAAAA",2,19.21,10.54,-0.29,0.1,2.89,1.07,0.01,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","TAGGAAGCAGACTAAT",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12P S45Y K56R G116L",4
"lib2","SARS-CoV-2","TAGGAAGCTGGTTTTT",2,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P D59S F99R Y159L",4
"lib2","SARS-CoV-2","TAGGAAGGGAATCAGG",3,0,NA,NA,NA,NA,NA,NA,"stop","F47M C61* K87V G146W",4
"lib2","SARS-CoV-2","TAGGAAGTTATCTGAG",4,2.95,NA,NA,NA,NA,NA,NA,"stop","A105* G172Q",2
"lib2","SARS-CoV-2","TAGGAATAACAGAGGG",2,23.11,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R25I L38C K56C F99S G174E",5
"lib2","SARS-CoV-2","TAGGAATATGTATCTA",6,24.15,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","C6V F12A G117I V182T",4
"lib2","SARS-CoV-2","TAGGAATATTACCGTC",5,31.5,10.74,-0.09,0.08,2.83,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGAATCCTTAAGAG",11,284.47,8.74,-2.1,0.06,2.79,1.1,0,">1 nonsynonymous","S45C F126I",2
"lib2","SARS-CoV-2","TAGGAATGAGGGAAAG",1,10.55,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","S41W T63S D90S F99A",4
"lib2","SARS-CoV-2","TAGGAATTCAACGAGA",1,5.71,6,-4.84,2,3,1.12,0.02,">1 nonsynonymous","G83N F99I L162S",3
"lib2","SARS-CoV-2","TAGGAATTCTGCTAAA",11,71.41,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A33R T55M L131A Q144S",4
"lib2","SARS-CoV-2","TAGGACAAAAATGCAT",6,81,9.1,-1.74,0.13,1.71,1.12,0.01,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","TAGGACAAATCCGTGG",3,46.88,9.97,-0.87,0.1,2.55,1.09,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","TAGGACACTTACAAGC",5,34.5,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P82Q G86V Y121R L131M",4
"lib2","SARS-CoV-2","TAGGACAGGAGGATCC",2,20.48,9.26,-1.57,0.07,2.89,1.06,0,">1 nonsynonymous","T55D S129F G152T F156S",4
"lib2","SARS-CoV-2","TAGGACAGTACATATT",5,3.53,NA,NA,NA,NA,NA,NA,"stop","F44T N120K K198*",3
"lib2","SARS-CoV-2","TAGGACATGTGACGGT",2,12.97,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N24V T46F R179K F185Y",4
"lib2","SARS-CoV-2","TAGGACATTTTCAACA",5,32,8.45,-2.39,0.49,1.5,1,0.07,">1 nonsynonymous","D34F P96R Y159F",3
"lib2","SARS-CoV-2","TAGGACCCATCCCCTA",14,141.01,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6M R16L T46L K56M V103S N118S",6
"lib2","SARS-CoV-2","TAGGACCCTTAATACA",3,29.96,10.89,0.06,0.08,2.77,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGACCGATACAAAG",2,73.38,8.82,-2.01,0.08,2.88,1.05,0,">1 nonsynonymous","C61N G83N D90Q Y119I F160S",5
"lib2","SARS-CoV-2","TAGGACGATCATATCA",11,107.65,10.18,-0.66,0.05,2.62,1.06,0,">1 nonsynonymous","F12I T85R D98A P149V",4
"lib2","SARS-CoV-2","TAGGACGGAGGGCTCT",2,43.52,10.76,-0.08,0.02,2.93,1.09,0,"1 nonsynonymous","N120G",1
"lib2","SARS-CoV-2","TAGGACGTCCGACCGG",7,247,9.67,-1.17,0.06,2.8,1.08,0,">1 nonsynonymous","D34Q K87S",2
"lib2","SARS-CoV-2","TAGGACGTTCCTACAG",1,9.66,7.42,-3.42,0.33,1.97,1.08,0.02,">1 nonsynonymous","A22E C158R",2
"lib2","SARS-CoV-2","TAGGACTACTACTAAG",12,58.81,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y165G G172L",2
"lib2","SARS-CoV-2","TAGGACTATTAACGAA",1,6.98,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","T100R F134C C158R V173L",4
"lib2","SARS-CoV-2","TAGGACTCGTTCTTTA",4,26.23,9.03,-1.81,0.14,1.72,1.06,0.01,">1 nonsynonymous","L38C S129F",2
"lib2","SARS-CoV-2","TAGGACTGCAACAGAC",13,136.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9Q N40K D98I S113F N120S L162I",6
"lib2","SARS-CoV-2","TAGGAGAAATGCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","D98* L125S",2
"lib2","SARS-CoV-2","TAGGAGAACAAGCAGC",2,117.41,9.81,-1.03,0.06,2.45,1.03,0,">1 nonsynonymous","G83C E154G V181I",3
"lib2","SARS-CoV-2","TAGGAGAAGGAAAGCT",3,7.1,8.12,-2.71,0.37,1.5,1.03,0.05,">1 nonsynonymous","N1S F8K R16D V115K S129R V153F",6
"lib2","SARS-CoV-2","TAGGAGAATGGGGGAA",7,27.48,6,-4.84,1.45,1.5,1.19,0.02,">1 nonsynonymous","I72S R127E Q163S",3
"lib2","SARS-CoV-2","TAGGAGACACCGATAT",4,49.13,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","R25N N64I P96L",3
"lib2","SARS-CoV-2","TAGGAGACATCTAAAA",8,65.83,10.67,-0.17,0.08,2.81,1.21,0,"1 nonsynonymous","L188P",1
"lib2","SARS-CoV-2","TAGGAGACGCAACGAT",4,19.24,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N58R S69R N107H K128N",4
"lib2","SARS-CoV-2","TAGGAGATCTCGCGCA",7,176.09,9.92,-0.91,0.04,2.94,1.07,0,">1 nonsynonymous","F44L P54R K87N N120S S129N",5
"lib2","SARS-CoV-2","TAGGAGATTCACTATG",2,9.48,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","T15L Y35N L60M D112Q",4
"lib2","SARS-CoV-2","TAGGAGCAAGTCAGTA",9,121.36,10.38,-0.46,0.04,2.92,1.08,0,">1 nonsynonymous","L5M P169L",2
"lib2","SARS-CoV-2","TAGGAGCCCCACGAGC",3,7.87,6,-4.84,2,3,1.05,0.01,">1 nonsynonymous","G86M A105Q R179P",3
"lib2","SARS-CoV-2","TAGGAGCGGGCACGAA",3,19.72,6.51,-4.32,0.31,1.5,1.12,0.01,">1 nonsynonymous","F12A N40L Y66R",3
"lib2","SARS-CoV-2","TAGGAGCTCAGGATTC",5,163.44,9.59,-1.24,0.03,2.94,1.08,0,"1 nonsynonymous","K114P",1
"lib2","SARS-CoV-2","TAGGAGCTTTAAATCA",11,220.32,10.83,-0.01,0.04,2.96,1.06,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","TAGGAGGATTGAAAAA",1,38.04,6.56,-4.28,0.55,1.5,1.24,0.03,">1 nonsynonymous","I2F I80M W106M K198N",4
"lib2","SARS-CoV-2","TAGGAGGCACGTTCCG",1,25.05,10.7,-0.14,0.06,2.94,1,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","TAGGAGGCAGGTACGG",6,34.6,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","D59F C102L L122P K132P L162I",5
"lib2","SARS-CoV-2","TAGGAGGCGTATCAGT",17,310.32,8.87,-1.97,0.06,2.67,1.07,0,">1 nonsynonymous","N24S N130V T170K Y178I",4
"lib2","SARS-CoV-2","TAGGAGTCAATGCGGC",6,55.93,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R16V S36K A105G D112R Y119F",5
"lib2","SARS-CoV-2","TAGGAGTTTATAGGTA",3,29.25,8.66,-2.17,0.13,2.49,1.13,0.01,">1 nonsynonymous","S129L G146Q",2
"lib2","SARS-CoV-2","TAGGATAAAATTCGTC",2,48.06,10.94,0.1,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGATAATTCATCAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3Q",1
"lib2","SARS-CoV-2","TAGGATACAAACTAAG",6,190.98,10.61,-0.22,0.04,2.91,1.07,0,"1 nonsynonymous","S139C",1
"lib2","SARS-CoV-2","TAGGATACCTAGCTTA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R16N",1
"lib2","SARS-CoV-2","TAGGATAGATCCTACA",16,3.63,NA,NA,NA,NA,NA,NA,"stop","Y66A A81Y G86I C150*",4
"lib2","SARS-CoV-2","TAGGATAGGACCTGTT",1,8.43,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G51Y A89G R127I",3
"lib2","SARS-CoV-2","TAGGATAGTAATATAT",12,1.59,NA,NA,NA,NA,NA,NA,"stop","P7H Y39* N64H G117V",4
"lib2","SARS-CoV-2","TAGGATAGTATACACC",2,47.5,10.44,-0.4,0.07,2.88,1.05,0,"1 nonsynonymous","T15I",1
"lib2","SARS-CoV-2","TAGGATATTACGTAGT",2,9.17,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F99G V103L E141Y",3
"lib2","SARS-CoV-2","TAGGATCAAAGATTTA",9,135.68,10.57,-0.26,0.05,2.93,1.07,0,">1 nonsynonymous","N1D V37K C61M L187P",4
"lib2","SARS-CoV-2","TAGGATCACAAAGGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92K R124Q",2
"lib2","SARS-CoV-2","TAGGATCACCTCACGT",13,2.58,NA,NA,NA,NA,NA,NA,"stop","S43* Y66F Y143R",3
"lib2","SARS-CoV-2","TAGGATCTAACTATCA",4,33.2,10.29,-0.55,0.07,2.86,1.04,0,">1 nonsynonymous","N64C T85L G146S",3
"lib2","SARS-CoV-2","TAGGATCTCCTAAAGG",8,10.1,6,-4.84,2,3,1.07,0,">1 nonsynonymous","C6Y D59L R73E P96D",4
"lib2","SARS-CoV-2","TAGGATCTGATACTAA",3,25.41,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N13L V77A G155L",3
"lib2","SARS-CoV-2","TAGGATGAGGGACGTA",17,377.2,10.8,-0.04,0.03,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGATGATAACGCTC",5,1.01,NA,NA,NA,NA,NA,NA,"stop","V20P I88* N92W D98L E141V P161R",6
"lib2","SARS-CoV-2","TAGGATGATATCCCTA",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108A L131W",2
"lib2","SARS-CoV-2","TAGGATGCATAGGCAA",8,88.31,7.03,-3.81,0.27,1.5,1.13,0.02,">1 nonsynonymous","V52L A89L",2
"lib2","SARS-CoV-2","TAGGATGCGAACACCC",1,22.23,6,-4.84,2,3,1.31,0.01,"1 nonsynonymous","R124S",1
"lib2","SARS-CoV-2","TAGGATGCTTACATGG",6,88.94,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56L P82Q F167N H189N",4
"lib2","SARS-CoV-2","TAGGATTCTCAAGTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I138L Q144I N151K T201S",4
"lib2","SARS-CoV-2","TAGGATTCTTAACTCT",3,61.42,10.81,-0.03,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGATTTATATCAGC",8,166.75,10.64,-0.2,0.04,2.97,1.04,0,">1 nonsynonymous","T63F E141D F160R",3
"lib2","SARS-CoV-2","TAGGATTTTTAATACA",1,0,NA,NA,NA,NA,NA,NA,"stop","L5Y F62L S69* P191S",4
"lib2","SARS-CoV-2","TAGGCAAACTTATCTA",2,52.86,10.84,0.01,0.04,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGCAACAACTATAT",5,23.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A42H T85W L95S",3
"lib2","SARS-CoV-2","TAGGCAACACATAACA",1,6.87,6,-4.84,2,3,1.06,0.01,">1 nonsynonymous","I28L Y93H P133N N157P",4
"lib2","SARS-CoV-2","TAGGCAATAGCCAATT",7,11.24,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15N Y35C F44W C61Q V103A Y121L",6
"lib2","SARS-CoV-2","TAGGCACAAGTATAAA",4,140.76,8.68,-2.16,0.08,2.86,1.04,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","TAGGCACATGCCGTTG",4,38.55,10.78,-0.06,0.07,2.95,1.05,0,">1 nonsynonymous","C61F F134G",2
"lib2","SARS-CoV-2","TAGGCACCTTTGTAAA",5,137.23,10.15,-0.68,0.05,2.61,1.05,0,">1 nonsynonymous","G9S V180L",2
"lib2","SARS-CoV-2","TAGGCACGAGTGTTCC",1,15.85,10.29,-0.55,0.17,2.7,1.04,0.01,">1 nonsynonymous","D75S N107C",2
"lib2","SARS-CoV-2","TAGGCACGGAGCCATT",1,69.15,10.87,0.03,0.07,2.92,1.1,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","TAGGCACTCCCCCGCG",1,7.85,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G117S I138V N157I P169S",4
"lib2","SARS-CoV-2","TAGGCACTTATTGACA",4,79.85,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P54A F167T",2
"lib2","SARS-CoV-2","TAGGCAGACTATTCAA",2,29.25,6,-4.84,2,3,1.06,0,">1 nonsynonymous","S29M Y39H L95R P149M",4
"lib2","SARS-CoV-2","TAGGCAGATAATGCGT",2,15.09,10.44,-0.4,0.09,2.97,1.03,0,"1 nonsynonymous","R136C",1
"lib2","SARS-CoV-2","TAGGCAGGGAGCTATT",8,139.87,10.84,0.01,0.06,2.89,1.12,0,"1 nonsynonymous","E10D",1
"lib2","SARS-CoV-2","TAGGCAGGTAAAACAT",4,42.47,10.49,-0.35,0.04,2.93,1.04,0,"1 nonsynonymous","F156R",1
"lib2","SARS-CoV-2","TAGGCAGTCTAAACCT",2,10.12,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S43Y G86Y N157Q Y165T",4
"lib2","SARS-CoV-2","TAGGCAGTTCTACATC",9,148.42,9.93,-0.9,0.06,2.27,1.06,0,">1 nonsynonymous","S45Y K56N A105C K199H",4
"lib2","SARS-CoV-2","TAGGCATAGTACTAAA",10,117.47,10.87,0.04,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGCATATCAGAGAC",7,155.4,9.68,-1.15,0.04,2.91,1.09,0,">1 nonsynonymous","N110A Y159F",2
"lib2","SARS-CoV-2","TAGGCATTAACGCTAA",11,126.46,10.88,0.05,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGCATTCAGAATCT",3,19.68,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K94D N107S S200I",3
"lib2","SARS-CoV-2","TAGGCCAAATAGCTGG",6,85.79,8.82,-2.01,0.09,2.8,1.06,0,">1 nonsynonymous","V65G G166C",2
"lib2","SARS-CoV-2","TAGGCCAATCTCCAAT",15,166.55,9.51,-1.32,0.04,2.78,1.09,0,"1 nonsynonymous","Y121P",1
"lib2","SARS-CoV-2","TAGGCCACAGAAAGTT",1,3.8,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","TAGGCCAGTCGCCGTG",6,46.76,9.56,-1.27,0.07,2.2,1.02,0,">1 nonsynonymous","N64M A145M L183V",3
"lib2","SARS-CoV-2","TAGGCCGGCACATCAT",2,35.05,9.2,-1.64,0.06,2.94,1.1,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","TAGGCCTAAATTACTG",5,92.22,10.1,-0.74,0.05,2.72,1.05,0,">1 nonsynonymous","T140A P161S",2
"lib2","SARS-CoV-2","TAGGCCTCAAGACGAC",8,71.32,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R25Q P54A Y119S A145R",4
"lib2","SARS-CoV-2","TAGGCCTCATCCGGAG",6,2.02,NA,NA,NA,NA,NA,NA,"stop","K56W I104* R136Y",3
"lib2","SARS-CoV-2","TAGGCCTCTTTAGTTA",19,422.38,10.74,-0.09,0.03,2.93,1.09,0,">1 nonsynonymous","T85E L122H",2
"lib2","SARS-CoV-2","TAGGCCTGCACTGACT",7,42.85,8.29,-2.55,0.26,1.5,1.14,0.03,">1 nonsynonymous","I2H A14M V77T A105Y",4
"lib2","SARS-CoV-2","TAGGCGAAATACAATA",9,106.88,8.95,-1.89,0.08,2.26,1.07,0,">1 nonsynonymous","R73L Q144N",2
"lib2","SARS-CoV-2","TAGGCGAATTAATAGG",3,4.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93D",1
"lib2","SARS-CoV-2","TAGGCGACAAAAAATC",1,12,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","F44W L95D",2
"lib2","SARS-CoV-2","TAGGCGATTTAACAAT",6,66.07,8.82,-2.01,0.28,1.5,1,0.04,">1 nonsynonymous","N4M A14E W106F N120Y S147V",5
"lib2","SARS-CoV-2","TAGGCGATTTCATGAC",10,85.64,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9M F99S F126S Q144D T201S",5
"lib2","SARS-CoV-2","TAGGCGCACTTCGACC",1,5.87,6,-4.84,2,1.5,1.12,0.05,">1 nonsynonymous","W23L S41L V103L",3
"lib2","SARS-CoV-2","TAGGCGCAGTCATCAT",6,96.43,8.31,-2.53,0.16,2.35,1.07,0.01,">1 nonsynonymous","D97S N157Y",2
"lib2","SARS-CoV-2","TAGGCGCCCGCAAGTT",14,41.79,6,-4.84,2,1.72,1.14,0.01,">1 nonsynonymous","T3V T85F Y93K A105W",4
"lib2","SARS-CoV-2","TAGGCGGCACTTACGA",6,46.16,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V71L I72F W106R P169R",4
"lib2","SARS-CoV-2","TAGGCGGGATAACAAG",9,1.02,NA,NA,NA,NA,NA,NA,"stop","E10* P96I Y121I F156S",4
"lib2","SARS-CoV-2","TAGGCGGTCCGACTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F47L T100S Y123* K198W",4
"lib2","SARS-CoV-2","TAGGCGTAAAAATGCT",2,36.74,8.25,-2.59,0.2,2.03,1.04,0.02,">1 nonsynonymous","G9S D112M",2
"lib2","SARS-CoV-2","TAGGCGTAGCAAAGTA",2,11.05,6.47,-4.36,0.43,1.5,1.12,0.02,">1 nonsynonymous","D90P R127C",2
"lib2","SARS-CoV-2","TAGGCGTCATCATCTG",1,10.7,9.5,-1.34,0.16,2.24,1.03,0.01,">1 nonsynonymous","T3K W106I K114S",3
"lib2","SARS-CoV-2","TAGGCGTTCTCTTCGT",3,52.71,10.69,-0.15,0.05,2.85,1.13,0,">1 nonsynonymous","R27I E154G",2
"lib2","SARS-CoV-2","TAGGCTAAGTACAGCA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3P F44C N64V K114H F156*",5
"lib2","SARS-CoV-2","TAGGCTACATATGTCC",1,0.04,NA,NA,NA,NA,NA,NA,"stop","S41* P82A D112K Y119V",4
"lib2","SARS-CoV-2","TAGGCTAGGTTGAGGT",15,1.88,NA,NA,NA,NA,NA,NA,"stop","Y35* A67T V115S N157H E186Y",5
"lib2","SARS-CoV-2","TAGGCTATCCAGTTAA",3,40.15,10.8,-0.03,0.06,2.92,1.1,0,"1 nonsynonymous","I2D",1
"lib2","SARS-CoV-2","TAGGCTATCGAAATGT",1,14.64,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","F44R T63R I88V Y119M Q144F G174S",6
"lib2","SARS-CoV-2","TAGGCTCCAACCTAAA",3,28.03,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I2S W23C N107R",3
"lib2","SARS-CoV-2","TAGGCTCCCAATTAAT",6,0.43,NA,NA,NA,NA,NA,NA,"stop","I28Y C61W P96* E135L S147T G166T P177C",7
"lib2","SARS-CoV-2","TAGGCTCCTCGCAACA",2,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S K94A F99P S139H",4
"lib2","SARS-CoV-2","TAGGCTCGAGACCGGA",13,345.71,9.76,-1.08,0.03,2.92,1.09,0,"1 nonsynonymous","F126W",1
"lib2","SARS-CoV-2","TAGGCTCGATGTATGG",6,84.63,10.71,-0.13,0.07,2.87,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGCTGACTATTGGT",5,72.14,10.75,-0.09,0.03,2.99,1.02,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","TAGGCTGCTACCATAG",1,17.02,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","Y93S L125Y P177S",3
"lib2","SARS-CoV-2","TAGGCTGTATAGTGGG",1,2.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102D",1
"lib2","SARS-CoV-2","TAGGCTTTAATATACT",8,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15D V103G N118I F160R Y178N",5
"lib2","SARS-CoV-2","TAGGGAAACATGCTAA",9,108.34,8.62,-2.21,0.07,2.71,1.07,0,">1 nonsynonymous","T3K S41T G117L T140A",4
"lib2","SARS-CoV-2","TAGGGAAATGCATTAT",1,30.29,6,-4.84,1.01,3,1.09,0,">1 nonsynonymous","C150Y Y165M",2
"lib2","SARS-CoV-2","TAGGGAAGAAGATCAT",4,17.91,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N40L G83I Y91P",3
"lib2","SARS-CoV-2","TAGGGAAGATTAATAA",2,17.44,10.19,-0.64,0.13,2.8,1.04,0.01,">1 nonsynonymous","N58H T100A",2
"lib2","SARS-CoV-2","TAGGGAAGTCCTTAAA",1,16.97,10.6,-0.24,0.1,2.8,1.16,0,">1 nonsynonymous","G83S T201K",2
"lib2","SARS-CoV-2","TAGGGAATAGCTCAGA",1,4.45,NA,NA,NA,NA,NA,NA,"stop","C61M A89S D90I G146T F156*",5
"lib2","SARS-CoV-2","TAGGGAATCAACTAAA",4,29.43,10.52,-0.32,0.07,2.92,1.06,0,">1 nonsynonymous","S129W P149S",2
"lib2","SARS-CoV-2","TAGGGAATCGTTACTT",17,54.82,6,-4.84,2,3,1.26,0,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","TAGGGAATGCTCAGAG",1,52.2,6,-4.84,2,3,1.07,0,">1 nonsynonymous","G9K C31F L57N R124L",4
"lib2","SARS-CoV-2","TAGGGACAACATATGT",3,10.92,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A14I D34H C61S F126G Q163H",5
"lib2","SARS-CoV-2","TAGGGACCCAAACTAA",11,61.1,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I2V W23L L122P T148S",4
"lib2","SARS-CoV-2","TAGGGACTGAAGAATA",4,25.88,10.41,-0.42,0.06,3,1.02,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","TAGGGACTTAACAGGA",1,15.02,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","L5C S29I R136N T170R",4
"lib2","SARS-CoV-2","TAGGGAGAATCACAGC",11,69.22,6.07,-4.76,0.68,1.5,1.14,0.01,">1 nonsynonymous","F8S A14D P96Q",3
"lib2","SARS-CoV-2","TAGGGAGGTAAAGACC",11,89.99,10.6,-0.24,0.03,2.95,1.06,0,">1 nonsynonymous","S41M F47W T201N",3
"lib2","SARS-CoV-2","TAGGGAGTCAGTCGCG",6,71.56,10.85,0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGAGTCGAGCGAA",8,84.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y121D T170F",2
"lib2","SARS-CoV-2","TAGGGATAACGAATGG",18,182.05,10.49,-0.34,0.05,2.9,1.1,0,"1 nonsynonymous","G166N",1
"lib2","SARS-CoV-2","TAGGGATACAATTTGC",6,96.07,10.66,-0.18,0.06,2.91,1.08,0,">1 nonsynonymous","K132G T140Q Y178F",3
"lib2","SARS-CoV-2","TAGGGATAGAACATAT",2,4.19,NA,NA,NA,NA,NA,NA,"stop","R25E K94* G146P G152H",4
"lib2","SARS-CoV-2","TAGGGATAGTACTTAT",1,26.59,6.47,-4.37,0.46,1.5,1.09,0.02,">1 nonsynonymous","I88V C158A T201M",3
"lib2","SARS-CoV-2","TAGGGATATCTTTCCT",3,0,NA,NA,NA,NA,NA,NA,"stop","Y93L E141* V153R",3
"lib2","SARS-CoV-2","TAGGGATCCGCATCGA",9,0.81,NA,NA,NA,NA,NA,NA,"stop","R127* T201S",2
"lib2","SARS-CoV-2","TAGGGATGCCTACGAC",14,8.32,NA,NA,NA,NA,NA,NA,"stop","S36* T85L F99L D137G K199*",5
"lib2","SARS-CoV-2","TAGGGATTGTATGACG",13,201.76,10.74,-0.1,0.03,2.99,1.02,0,">1 nonsynonymous","I2F L60C",2
"lib2","SARS-CoV-2","TAGGGCAACTCGCCAT",4,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82K K94H L183R",3
"lib2","SARS-CoV-2","TAGGGCAAGACATAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q D59E V71L G172R",4
"lib2","SARS-CoV-2","TAGGGCACAAGATTCG",3,20.06,7.25,-3.59,1.05,3,1.14,0,">1 nonsynonymous","T15V F44P A89H",3
"lib2","SARS-CoV-2","TAGGGCACAGACACTC",2,14.94,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G86V G146S S200P",3
"lib2","SARS-CoV-2","TAGGGCACTTCCGTCC",3,67.83,10.61,-0.23,0.07,2.86,1.04,0,">1 nonsynonymous","E10W V37F",2
"lib2","SARS-CoV-2","TAGGGCAGCAAATGAT",5,15.76,10.81,-0.02,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGCCAAGATGTTC",5,27.66,6.1,-4.74,1.13,1.5,1.17,0.05,">1 nonsynonymous","A42F K56V Y119E T170P V182L",5
"lib2","SARS-CoV-2","TAGGGCCACTAAAATA",1,12.59,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","I2A V103F F160L",3
"lib2","SARS-CoV-2","TAGGGCCCTCACCCTA",2,31.45,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T55S Q84P L95G S129Y V180L",5
"lib2","SARS-CoV-2","TAGGGCGATGACAGAG",5,36.72,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F12L V37S A67P",3
"lib2","SARS-CoV-2","TAGGGCGCATAAAGTC",3,27.01,6.18,-4.65,0.63,1.5,1.15,0.02,">1 nonsynonymous","T85G F99T",2
"lib2","SARS-CoV-2","TAGGGCTAGAGGGGCA",2,86.03,10.81,-0.03,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGCTATGATCAAG",3,14.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5S V103P Y119S F167G",4
"lib2","SARS-CoV-2","TAGGGCTTAACATACT",9,49.72,7.08,-3.75,0.39,1.5,1.16,0.04,">1 nonsynonymous","F8R T15K I142V F160A G174C",5
"lib2","SARS-CoV-2","TAGGGGACATACTAAA",2,5.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26V K56C P96V N120H L162R L183S",6
"lib2","SARS-CoV-2","TAGGGGATACCCTCAT",17,113.57,6.13,-4.7,0.55,1.5,1.14,0.01,">1 nonsynonymous","N107I C150A L162C N171R",4
"lib2","SARS-CoV-2","TAGGGGATAGCTTATC",1,4.42,NA,NA,NA,NA,NA,NA,"stop","F156I V180*",2
"lib2","SARS-CoV-2","TAGGGTAATTCCTATG",11,84.33,10.85,0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGTACTAAACAAA",26,366.65,10.85,0.02,0.04,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGTATGCAGCACC",16,121.56,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49M G116T G172V",3
"lib2","SARS-CoV-2","TAGGGTCCTTTGCGAT",1,45.09,10.61,-0.23,0.05,3,1,0,">1 nonsynonymous","F12L R27K",2
"lib2","SARS-CoV-2","TAGGGTCGCGAAATCA",2,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L N64Y Q144H T201L",4
"lib2","SARS-CoV-2","TAGGGTGAACCCGGAT",1,1.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60V G74T C102V F156L",4
"lib2","SARS-CoV-2","TAGGGTGACACATCGG",1,6.28,10.83,0,0.14,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGGTGTTCACAAAC",15,4.76,NA,NA,NA,NA,NA,NA,"stop","F12* R16A N58T D68* Y143*",5
"lib2","SARS-CoV-2","TAGGGTTGAAACCCGT",2,17.59,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","I2Y A14D T55L F167P",4
"lib2","SARS-CoV-2","TAGGTAAACGAATCAA",6,18.51,6.08,-4.76,0.78,1.5,1.1,0.03,">1 nonsynonymous","C6M W106N E141H",3
"lib2","SARS-CoV-2","TAGGTAAAGTAGATCT",5,91.59,6.23,-4.61,0.54,1.5,1.19,0.01,">1 nonsynonymous","T63Q N118K E135H G155R",4
"lib2","SARS-CoV-2","TAGGTAAATAGGATCC",3,35.6,10.67,-0.17,0.07,2.81,1.21,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","TAGGTAACAAGAAACA",2,23.66,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V32Q D137M",2
"lib2","SARS-CoV-2","TAGGTAACACTATAAA",5,34.88,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G51D I72S",2
"lib2","SARS-CoV-2","TAGGTAACTCAATACT",2,20.28,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V11N A89S G166K",3
"lib2","SARS-CoV-2","TAGGTAAGGGACCCAG",2,22.96,9.2,-1.64,0.15,1.98,1.09,0.01,">1 nonsynonymous","D90V N120C",2
"lib2","SARS-CoV-2","TAGGTAAGTCTTATTA",1,30.61,9.45,-1.39,0.08,2.92,1.09,0,">1 nonsynonymous","Y35M K114P",2
"lib2","SARS-CoV-2","TAGGTAATGAGATATG",2,79.74,10.81,-0.03,0.02,2.95,1.02,0,"1 nonsynonymous","L60E",1
"lib2","SARS-CoV-2","TAGGTAATGCACACAA",3,35.62,10.81,-0.03,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGTAATTGTGGACG",11,93.58,10.22,-0.62,0.04,2.87,1.12,0,"1 nonsynonymous","N171C",1
"lib2","SARS-CoV-2","TAGGTACACATCTAAT",1,37.2,9.36,-1.48,0.09,2.73,1.01,0,">1 nonsynonymous","R27G E76W",2
"lib2","SARS-CoV-2","TAGGTACCCATTGTCA",1,23.75,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C31K N107T L122A",3
"lib2","SARS-CoV-2","TAGGTACCCTGTCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6L C31Y I88*",3
"lib2","SARS-CoV-2","TAGGTACCGTAATCCA",3,21.17,8.43,-2.4,0.25,1.74,1.07,0.03,">1 nonsynonymous","F134T T148I L162V V173A",4
"lib2","SARS-CoV-2","TAGGTACCGTTTTTAT",5,23.09,10.78,-0.06,0.08,2.82,1.2,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGTACTGTCGATTA",4,39.56,8.91,-1.92,0.17,2.48,1.17,0.01,">1 nonsynonymous","E10S G166E",2
"lib2","SARS-CoV-2","TAGGTAGCAACTGAAT",2,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33G N58T T100H W106T P169L",5
"lib2","SARS-CoV-2","TAGGTAGTACAAAAGC",9,6.71,NA,NA,NA,NA,NA,NA,"stop","F62* P169L P177E",3
"lib2","SARS-CoV-2","TAGGTAGTAGAAGTAA",14,157.17,10.55,-0.29,0.03,2.95,1.03,0,">1 nonsynonymous","T55L L111W I142L",3
"lib2","SARS-CoV-2","TAGGTAGTGCAAACTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T T15W N58G D90V D98C E141K V181R",7
"lib2","SARS-CoV-2","TAGGTATAACCTATGC",4,30.05,7,-3.84,0.32,1.5,1.16,0.03,">1 nonsynonymous","A33S D97F G117S K128L",4
"lib2","SARS-CoV-2","TAGGTATAAGAGCATT",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W S43L E141W G152A Y159K C195F",6
"lib2","SARS-CoV-2","TAGGTATAGAAATGAT",5,39.94,8.86,-1.97,0.06,2.77,1.15,0,">1 nonsynonymous","F8V V115R Y175H",3
"lib2","SARS-CoV-2","TAGGTATTCAAGATAT",2,26.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","I2N K87P P96L R136L",4
"lib2","SARS-CoV-2","TAGGTCAAAAGCACTT",1,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L I104E",2
"lib2","SARS-CoV-2","TAGGTCAAATTTCAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* F134T",2
"lib2","SARS-CoV-2","TAGGTCAACCGGTGTT",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43Y D59Q Y91V L95T G155C",5
"lib2","SARS-CoV-2","TAGGTCACAAATAAGA",7,29.44,8.76,-2.08,0.13,1.61,1.13,0.01,">1 nonsynonymous","G51F S164L",2
"lib2","SARS-CoV-2","TAGGTCACCGCCCGAC",3,130.13,10.65,-0.18,0.02,2.94,1.05,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","TAGGTCAGTGGGCATA",1,43.35,10.82,-0.02,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGTCCATAGATCTA",5,34.99,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T15M K132V C158L K199T",4
"lib2","SARS-CoV-2","TAGGTCCCCAAGACGT",5,15.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V20R T46V",2
"lib2","SARS-CoV-2","TAGGTCCCTAAATTAC",3,14.51,10.9,0.07,0.13,2.81,1.01,0.01,">1 nonsynonymous","K56D E141H V153K",3
"lib2","SARS-CoV-2","TAGGTCCCTGAGAATT",2,26.06,10.66,-0.18,0.05,2.92,1.08,0,"1 nonsynonymous","N13G",1
"lib2","SARS-CoV-2","TAGGTCGCGACATACC",3,80.58,10.83,0,0.04,2.94,1.07,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","TAGGTCGCTGCTCGAA",5,0,NA,NA,NA,NA,NA,NA,"stop","C6P V37L E141*",3
"lib2","SARS-CoV-2","TAGGTCTAAAACCCAA",9,234.59,10.12,-0.71,0.05,2.77,1.06,0,">1 nonsynonymous","R16N A105Y G196R",3
"lib2","SARS-CoV-2","TAGGTCTAAAACGCAG",6,104.98,10.61,-0.23,0.05,2.88,1.08,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","TAGGTCTCTCAAAACC",25,242.23,10.66,-0.17,0.03,2.92,1.08,0,">1 nonsynonymous","T55G F160E",2
"lib2","SARS-CoV-2","TAGGTCTGTTGAAAAT",18,172.69,9.65,-1.19,0.05,2.04,1.07,0,">1 nonsynonymous","A105N T201V",2
"lib2","SARS-CoV-2","TAGGTGAAATCCGCAA",3,11.11,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","TAGGTGAATCATGATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88P W106T P169Y",3
"lib2","SARS-CoV-2","TAGGTGAATGCAAAAA",1,13.85,10.75,-0.08,0.08,3,1.01,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","TAGGTGACCACAATCT",8,18.59,8.24,-2.59,0.26,1.5,1.13,0.03,">1 nonsynonymous","R127Q Q144E",2
"lib2","SARS-CoV-2","TAGGTGACCTCCCGAA",16,5.86,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14V S41H D98V P149H C158G",5
"lib2","SARS-CoV-2","TAGGTGATAGTATGCA",1,34.26,10.79,-0.05,0.07,2.9,1.1,0,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","TAGGTGATCACTGAAA",4,38.91,10.47,-0.37,0.06,3,1,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","TAGGTGATCAGGATTT",6,11.98,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","T15A F70I P149L",3
"lib2","SARS-CoV-2","TAGGTGCATCAACAGC",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105V L131Q T201W",3
"lib2","SARS-CoV-2","TAGGTGCGTAGATATG",4,0.28,NA,NA,NA,NA,NA,NA,"stop","S41V N118H S184C T201*",4
"lib2","SARS-CoV-2","TAGGTGCTGCAAGGAG",2,26.21,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","S36V C61R V77D T85R D98E",5
"lib2","SARS-CoV-2","TAGGTGCTGGATTCCA",20,70.73,9.57,-1.27,0.24,1.58,1.11,0.03,">1 nonsynonymous","N1G P96L",2
"lib2","SARS-CoV-2","TAGGTGGATTACCCGA",5,0,NA,NA,NA,NA,NA,NA,"stop","S41* Y119T Y165K",3
"lib2","SARS-CoV-2","TAGGTGGATTATCACT",2,6.78,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S36C S43A V103G T201V",4
"lib2","SARS-CoV-2","TAGGTGTACAATGTGT",3,104.59,10.74,-0.1,0.04,2.94,1.07,0,">1 nonsynonymous","C61S V153Q",2
"lib2","SARS-CoV-2","TAGGTTAACACTGTAG",4,10.89,10.81,-0.03,0.04,3,1.02,0,">1 nonsynonymous","T63S D97P",2
"lib2","SARS-CoV-2","TAGGTTAAGGACTAAA",12,221.88,10.63,-0.2,0.03,2.93,1.08,0,">1 nonsynonymous","P7K Y35I V115R G152D",4
"lib2","SARS-CoV-2","TAGGTTACGTACACAC",5,94.4,9.77,-1.06,0.11,2.18,1.05,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TAGGTTAGAAGAACCT",4,99.65,10.05,-0.79,0.09,2.6,1.02,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TAGGTTAGGAGCACTT",3,32.13,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","I104E Y119V",2
"lib2","SARS-CoV-2","TAGGTTATTTCTACGT",2,29.02,10.67,-0.16,0.07,2.79,1.21,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","TAGGTTCACATCTGGG",5,140.81,8.72,-2.12,0.08,1.97,1.12,0,">1 nonsynonymous","F8S P169S",2
"lib2","SARS-CoV-2","TAGGTTCCGACGTGGG",5,29.47,10.91,0.08,0.45,1.59,1,0.07,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","TAGGTTCTCATTGAGC",5,57.76,10.59,-0.24,0.03,2.91,1.09,0,">1 nonsynonymous","S53F G146S",2
"lib2","SARS-CoV-2","TAGGTTGACAGGCTAA",2,84.58,10.84,0.01,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGTTGCTAAATTAG",1,16.23,10.69,-0.15,0.08,2.72,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGGTTGGAGAACGTC",8,55.29,6.55,-4.28,0.42,1.5,1.17,0.02,">1 nonsynonymous","F12D Y178S",2
"lib2","SARS-CoV-2","TAGGTTGTGAGGCGAA",2,9.51,10.88,0.04,0.11,2.97,1.01,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","TAGGTTTAATCCAAAG",4,15.87,7.01,-3.82,0.47,1.86,1.21,0.04,">1 nonsynonymous","I28S D98G Y119R S139T",4
"lib2","SARS-CoV-2","TAGGTTTATTTCCACA",6,2.76,NA,NA,NA,NA,NA,NA,"stop","L5* A42R P54A F99Y N151P",5
"lib2","SARS-CoV-2","TAGTAAAAAACCAGAC",4,47.08,6.17,-4.66,0.85,1.5,1.2,0.03,">1 nonsynonymous","S19L D90L",2
"lib2","SARS-CoV-2","TAGTAAAACACAAAAT",7,105.53,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I28M S129K Y175E F185S",4
"lib2","SARS-CoV-2","TAGTAAAACGCCAGAA",10,75.47,10.58,-0.25,0.04,2.88,1.08,0,">1 nonsynonymous","V11I W106Y",2
"lib2","SARS-CoV-2","TAGTAAAAGCGCGCAC",4,17.11,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","L95S K199N",2
"lib2","SARS-CoV-2","TAGTAAAATAACTATG",4,75.9,10.81,-0.03,0.02,2.96,1.04,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","TAGTAAAATGAACCCA",5,102.02,10.84,0,0.07,2.8,1.1,0,"1 nonsynonymous","K56S",1
"lib2","SARS-CoV-2","TAGTAAACATGCGAGG",3,6.55,NA,NA,NA,NA,NA,NA,"stop","L5S T15W R27K S45* N107A",5
"lib2","SARS-CoV-2","TAGTAAACTCATTAAC",1,3.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R L38A F70T",3
"lib2","SARS-CoV-2","TAGTAAAGCATGTCCA",8,90.3,10.85,0.01,0.06,2.93,1.09,0,"1 nonsynonymous","N120D",1
"lib2","SARS-CoV-2","TAGTAAAGCCTGATGC",16,24.63,6.48,-4.35,0.74,1.5,1.11,0.06,">1 nonsynonymous","N13W G86S V103L F126E",4
"lib2","SARS-CoV-2","TAGTAAAGGACCAGAA",2,84.59,9.82,-1.02,0.04,2.13,1.04,0,">1 nonsynonymous","L38T K56T",2
"lib2","SARS-CoV-2","TAGTAAAGGTGGCGCA",3,18.9,10.3,-0.53,0.09,2.52,1,0.01,">1 nonsynonymous","N1E K26A K48L D90N",4
"lib2","SARS-CoV-2","TAGTAAATGAATAATA",2,8.14,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","S43K I88A I142M C150F",4
"lib2","SARS-CoV-2","TAGTAAATGCTTAGTA",6,47.65,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I88S K114A F126G G152L",4
"lib2","SARS-CoV-2","TAGTAAATGTTGTACG",8,39.97,7.21,-3.63,0.36,1.5,1.03,0.02,">1 nonsynonymous","A89K D97F A105G P161F",4
"lib2","SARS-CoV-2","TAGTAACAAACCTGCG",2,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A V71R Y93A P149N F185R",5
"lib2","SARS-CoV-2","TAGTAACACTGCTGTT",2,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27C K56E S113G N120M Q176L",5
"lib2","SARS-CoV-2","TAGTAACAGAATTAAA",3,1.47,NA,NA,NA,NA,NA,NA,"stop","R25D V37W Y119* S139F P169K",5
"lib2","SARS-CoV-2","TAGTAACATAAACACA",4,11.51,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","I104N R124F V181L",3
"lib2","SARS-CoV-2","TAGTAACCCAGAAGTG",1,21.39,10.8,-0.04,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTAACCTTAGCGGA",5,72.51,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","I72W K128F Y165P",3
"lib2","SARS-CoV-2","TAGTAACGAAAACTCA",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D G101T",2
"lib2","SARS-CoV-2","TAGTAACGGAACATTG",5,61.01,10.59,-0.25,0.09,2.71,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTAACTAAAATTGA",16,209.54,10.59,-0.25,0.02,2.95,1.04,0,">1 nonsynonymous","N64A I80L",2
"lib2","SARS-CoV-2","TAGTAACTTAAGGACT",9,66.05,8.66,-2.17,0.29,1.5,1,0.04,">1 nonsynonymous","G83R V103A",2
"lib2","SARS-CoV-2","TAGTAACTTCGCAAGT",2,1.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103Q",1
"lib2","SARS-CoV-2","TAGTAAGACCAGACTT",16,304.57,10.81,-0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTAAGACTATCCGT",5,14.69,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12L Y50V A105N P149G V153L",5
"lib2","SARS-CoV-2","TAGTAAGAGTATCACG",2,5.89,NA,NA,NA,NA,NA,0.29,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","TAGTAAGATGAAATGC",1,27.04,10.1,-0.74,0.14,2.5,1.26,0.01,"1 nonsynonymous","I28H",1
"lib2","SARS-CoV-2","TAGTAAGTCCTCACTC",1,30.74,6,-4.84,1.09,1.5,1.05,0.02,">1 nonsynonymous","D98H D137R",2
"lib2","SARS-CoV-2","TAGTAAGTGACCAAAG",6,59.88,7.92,-2.91,0.24,1.5,1.04,0.03,">1 nonsynonymous","Y93F G146F",2
"lib2","SARS-CoV-2","TAGTAATAACAATTCG",5,27.27,7.24,-3.59,0.42,1.5,1.04,0.03,">1 nonsynonymous","P7K A18S I28Q C61T G146K",5
"lib2","SARS-CoV-2","TAGTAATACAACTGGT",1,10.58,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","P96S T170N Q176A V182F",4
"lib2","SARS-CoV-2","TAGTAATCCAAAATTA",2,7.37,9.28,-1.56,0.17,2.85,1,0.03,">1 nonsynonymous","K48Y C61N G116Y",3
"lib2","SARS-CoV-2","TAGTAATTAACCGTGT",1,14.76,10.39,-0.45,0.1,2.83,1.08,0.01,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","TAGTAATTAGGACGTG",8,44.12,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A42T C49D V115S T148H C150F",5
"lib2","SARS-CoV-2","TAGTAATTATAAATAG",6,159.45,9.95,-0.88,0.04,2.36,1.05,0,">1 nonsynonymous","R16P D90T",2
"lib2","SARS-CoV-2","TAGTAATTATGTGATA",2,39.16,10.79,-0.05,0.06,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTAATTCTAATCTA",7,175.4,8.61,-2.23,0.06,2.85,1.09,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","TAGTAATTGTTGACGT",2,5.1,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","C6F G86A F134Y G146S",4
"lib2","SARS-CoV-2","TAGTAATTTGGCTACG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5R N13G L122* G155K",4
"lib2","SARS-CoV-2","TAGTACACATTGAGTC",1,80.75,10.73,-0.11,0.02,2.91,1.12,0,">1 nonsynonymous","L60K Q163T K199G",3
"lib2","SARS-CoV-2","TAGTACACGAGACGAT",4,68.87,10.41,-0.42,0.04,2.79,1.1,0,">1 nonsynonymous","Y91L G116P",2
"lib2","SARS-CoV-2","TAGTACACTAGGTATT",3,102.33,6,-4.84,1.46,1.5,1.15,0.02,">1 nonsynonymous","P54R L95V L122Y F156V Y175K",5
"lib2","SARS-CoV-2","TAGTACAGAACTGTCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2G N64V R127E P149M",4
"lib2","SARS-CoV-2","TAGTACAGCACACTGG",1,19.01,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D112F K128V F134A G174W",4
"lib2","SARS-CoV-2","TAGTACAGGGAATGTT",3,6.91,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Q168P T201G",2
"lib2","SARS-CoV-2","TAGTACAGTATAAATC",18,227.64,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","R124G",1
"lib2","SARS-CoV-2","TAGTACATGAAGTGAT",1,9.27,10.88,0.05,0.08,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTACCAACGACATA",2,31.83,9.06,-1.78,0.25,1.84,1.15,0.02,">1 nonsynonymous","D75Y D90F Q144S",3
"lib2","SARS-CoV-2","TAGTACCAGAAAAATC",1,6.33,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","F17L C49S K56R K87R Y159I",5
"lib2","SARS-CoV-2","TAGTACCCACTTGTCA",5,61.97,10.85,0.02,0.04,3,1.02,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","TAGTACCCCATTCATG",1,21.96,7.04,-3.79,0.36,1.5,1.23,0.03,">1 nonsynonymous","C61T S108I S147L",3
"lib2","SARS-CoV-2","TAGTACCGCCAGGATT",3,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Y F160T",2
"lib2","SARS-CoV-2","TAGTACCGTCAGACTT",6,31.51,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N4A E10D Y50A T100N",4
"lib2","SARS-CoV-2","TAGTACCTATGAACAA",6,62.94,9.73,-1.1,0.08,2.1,1.04,0,">1 nonsynonymous","I2L V37S P133L",3
"lib2","SARS-CoV-2","TAGTACCTATTATGAT",7,11.52,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","A14Y D137P L183E",3
"lib2","SARS-CoV-2","TAGTACCTGCATAATC",2,69.53,10.68,-0.15,0.03,2.89,1.1,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","TAGTACGAAATGTCTT",5,10.25,7.07,-3.77,0.55,2.12,1.24,0.03,">1 nonsynonymous","P82D D90L F99N N120D A190L K198V",6
"lib2","SARS-CoV-2","TAGTACGAGCCAAACT",4,28.05,11.17,0.33,0.07,2.85,1.17,0,"1 nonsynonymous","N171F",1
"lib2","SARS-CoV-2","TAGTACGAGCCTAACA",4,11.37,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L95S G152Y",2
"lib2","SARS-CoV-2","TAGTACGAGTCAGCAA",3,0.2,NA,NA,NA,NA,NA,NA,"stop","N4Y F17Y G83* D97R N107D K198N",6
"lib2","SARS-CoV-2","TAGTACGATAGTTGAT",3,110.29,9.81,-1.03,0.1,2.19,1,0,">1 nonsynonymous","N58C D97M Y178V",3
"lib2","SARS-CoV-2","TAGTACGCGACCACTA",14,251.9,10.83,0,0.05,2.95,1.06,0,"1 nonsynonymous","K56G",1
"lib2","SARS-CoV-2","TAGTACGGAATTGAAA",12,123.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y35G L57R P133I",3
"lib2","SARS-CoV-2","TAGTACTAAACGTTGT",5,42.54,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","G101E",1
"lib2","SARS-CoV-2","TAGTACTCAGTAATGA",3,6.84,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","W23V R27V D34V D137L",4
"lib2","SARS-CoV-2","TAGTACTGCGCATCAA",3,1.48,NA,NA,NA,NA,NA,NA,"stop","V71Q A145L Q168*",3
"lib2","SARS-CoV-2","TAGTACTGTTATGACG",2,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5N G51K S113T V153I F167N P177W",6
"lib2","SARS-CoV-2","TAGTACTTAAAAAAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S S200T",2
"lib2","SARS-CoV-2","TAGTAGAAATCGCACC",1,25.56,10.64,-0.19,0.07,2.92,1.03,0,">1 nonsynonymous","L60Y V71T",2
"lib2","SARS-CoV-2","TAGTAGAACGTCAACT",11,201.61,10.88,0.04,0.05,2.91,1.09,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","TAGTAGAATACAAACT",3,43.25,10.8,-0.03,0.03,2.93,1.06,0,">1 nonsynonymous","Q84V T201Q",2
"lib2","SARS-CoV-2","TAGTAGACGTATCGGA",3,18.43,6.53,-4.3,0.54,1.5,1.13,0.04,">1 nonsynonymous","A81H Y93G G152I G174T",4
"lib2","SARS-CoV-2","TAGTAGATTAGTACCA",5,63.95,10.8,-0.03,0.03,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTAGATTATAAGAC",5,38.28,8.73,-2.1,0.16,1.63,1.11,0.01,">1 nonsynonymous","Q79K S108C",2
"lib2","SARS-CoV-2","TAGTAGCAGATAGAGC",6,58.63,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y66I P96M Y123T I142M",4
"lib2","SARS-CoV-2","TAGTAGCATTTATGCT",6,98.67,10.45,-0.38,0.04,2.96,1.02,0,">1 nonsynonymous","S113C Q168F",2
"lib2","SARS-CoV-2","TAGTAGCGAAGAAATA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L D137Y Q144N Y165L",4
"lib2","SARS-CoV-2","TAGTAGGCAAGATTCT",3,85.25,9.91,-0.93,0.07,2.77,1,0,">1 nonsynonymous","G9Q F62I N107S",3
"lib2","SARS-CoV-2","TAGTAGGCCCTGCAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8A Y175N",2
"lib2","SARS-CoV-2","TAGTAGGGGCTAAAAT",3,20.36,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T3P D68E Y119P N151V G166F",5
"lib2","SARS-CoV-2","TAGTAGGTCCCGGTAC",3,22.77,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","K48Y P96L A105V V173R",4
"lib2","SARS-CoV-2","TAGTAGTAATGATTCA",4,1.17,NA,NA,NA,NA,NA,NA,"stop","F47* A81R Y178E",3
"lib2","SARS-CoV-2","TAGTAGTCATACTTGC",9,39.74,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G9K R73H L95S S139L",4
"lib2","SARS-CoV-2","TAGTAGTTTCCCACAA",2,0.39,NA,NA,NA,NA,NA,NA,"stop","V71* F99Y F160E",3
"lib2","SARS-CoV-2","TAGTATAAAAATTCCA",3,14.16,9.49,-1.34,0.16,1.82,1.07,0.01,">1 nonsynonymous","A105I S129L",2
"lib2","SARS-CoV-2","TAGTATAATATTTATG",1,10,6,-4.84,2,1.5,1.11,0.03,"1 nonsynonymous","F70R",1
"lib2","SARS-CoV-2","TAGTATACCTACTTAT",5,48.62,8.89,-1.95,0.18,2.19,1.14,0.01,">1 nonsynonymous","A42L D59G V115E L162F",4
"lib2","SARS-CoV-2","TAGTATACGCGCCCCA",2,7.06,NA,NA,NA,NA,NA,NA,"stop","D97L T100A K114*",3
"lib2","SARS-CoV-2","TAGTATAGCTATAGTT",3,24.73,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T15S T46S Y91Q Y119L N130F A145S",6
"lib2","SARS-CoV-2","TAGTATCAAGAGACTA",5,40.35,9.48,-1.35,0.23,1.82,1.07,0.02,">1 nonsynonymous","N13I V115G",2
"lib2","SARS-CoV-2","TAGTATCAAGGCTAGA",5,44.95,10.18,-0.66,0.07,2.71,1.02,0,">1 nonsynonymous","D98H G116W S129T G152D",4
"lib2","SARS-CoV-2","TAGTATCAATTACGAC",4,0,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib2","SARS-CoV-2","TAGTATCACAAAGTAT",1,18.43,9.28,-1.56,0.11,1.82,1.07,0,">1 nonsynonymous","N40L L57C T201S",3
"lib2","SARS-CoV-2","TAGTATCACTACTGAA",2,29.82,9.78,-1.06,0.13,2.27,1,0,">1 nonsynonymous","R25T P149L",2
"lib2","SARS-CoV-2","TAGTATCAGATAACCA",2,47.53,9.45,-1.39,0.1,1.85,1.02,0,">1 nonsynonymous","D34H A89T K114Q",3
"lib2","SARS-CoV-2","TAGTATCCCAAAGTAA",18,299.79,10.61,-0.22,0.03,2.96,1.04,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","TAGTATCGATGAAAAC",4,136.53,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N4C Q168P",2
"lib2","SARS-CoV-2","TAGTATCGATTTTGAA",5,169.37,10.03,-0.81,0.07,2.37,1.04,0,">1 nonsynonymous","F99P G101C",2
"lib2","SARS-CoV-2","TAGTATCGCTTAAGTA",5,27.9,7.27,-3.56,0.65,1.5,1.04,0.06,">1 nonsynonymous","C61S F99S",2
"lib2","SARS-CoV-2","TAGTATCTACCTACAA",5,49.72,10.79,-0.05,0.06,2.87,1.08,0,">1 nonsynonymous","G51N P149F T201P",3
"lib2","SARS-CoV-2","TAGTATCTGTTAGCAC",7,63.98,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L38M G86F Y121M G166K",4
"lib2","SARS-CoV-2","TAGTATGACCATTGAT",7,69.36,10.74,-0.09,0.05,2.89,1.11,0,">1 nonsynonymous","Y35F G152Y",2
"lib2","SARS-CoV-2","TAGTATGAGGTAAACA",12,142.14,7.3,-3.54,0.2,1.5,1.13,0.01,">1 nonsynonymous","D90T R179H",2
"lib2","SARS-CoV-2","TAGTATGCCGCGGTGT",2,36.77,6,-4.84,0.47,2.28,1.09,0,">1 nonsynonymous","A145F C150T",2
"lib2","SARS-CoV-2","TAGTATGCGCATATCT",2,27.33,10.76,-0.07,0.05,2.92,1.1,0,"1 nonsynonymous","G196W",1
"lib2","SARS-CoV-2","TAGTATGGAACACAAA",4,11.5,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y21D A42N C61W G117L",4
"lib2","SARS-CoV-2","TAGTATGTATAGTCGA",4,58.7,9.43,-1.4,0.06,1.86,1.03,0,">1 nonsynonymous","W106V A190W K199D",3
"lib2","SARS-CoV-2","TAGTATTAACACGTCG",32,319.55,9.04,-1.79,0.06,2.75,1.1,0,">1 nonsynonymous","S139C P149L F156T",3
"lib2","SARS-CoV-2","TAGTATTACCTCATAG",1,60.75,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Q84C F99I N157H",3
"lib2","SARS-CoV-2","TAGTATTATATTAAAC",5,0.03,NA,NA,NA,NA,NA,NA,"stop","S36* I88A D97F E141S N151A Y175A",6
"lib2","SARS-CoV-2","TAGTATTTACACCCAA",4,96.5,8.55,-2.29,0.07,2.47,1.13,0,">1 nonsynonymous","T15N D90N G117T",3
"lib2","SARS-CoV-2","TAGTATTTGCGTAAAT",1,6.9,9.72,-1.11,0.09,2.85,1.09,0,">1 nonsynonymous","Y119K P149F",2
"lib2","SARS-CoV-2","TAGTCAAATGATTTAC",4,16.32,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","Y91G D98F K199I",3
"lib2","SARS-CoV-2","TAGTCAACAACTACAC",1,70.54,8.55,-2.28,0.13,2.91,1.01,0.01,">1 nonsynonymous","F160A G166D",2
"lib2","SARS-CoV-2","TAGTCAACGGAAATAA",7,2.13,NA,NA,NA,NA,NA,NA,"stop","N13L P82* Y91H F99T",4
"lib2","SARS-CoV-2","TAGTCAAGTATACATC",3,8.52,8.63,-2.2,0.42,2.4,1.07,0.05,">1 nonsynonymous","V32W L60S L125C",3
"lib2","SARS-CoV-2","TAGTCAATACCCTGCG",1,15.3,9.26,-1.58,0.36,1.5,1.04,0.06,">1 nonsynonymous","F12Y Q84H G196E",3
"lib2","SARS-CoV-2","TAGTCACAACTTCATA",8,97.15,6.16,-4.67,0.55,1.5,1.13,0.01,">1 nonsynonymous","N4S F8Q G51D",3
"lib2","SARS-CoV-2","TAGTCACACCCCTGAT",2,23.62,10.71,-0.13,0.11,2.92,1.1,0.01,">1 nonsynonymous","T55I L122M",2
"lib2","SARS-CoV-2","TAGTCACCAAATAATG",9,1.29,NA,NA,NA,NA,NA,NA,"stop","C6M F47I C61T D97E A105* Y143S T201Y",7
"lib2","SARS-CoV-2","TAGTCACCACGCGGTC",2,313.79,9.38,-1.45,0.06,2.16,1.04,0,">1 nonsynonymous","Y35L K56V Y178K",3
"lib2","SARS-CoV-2","TAGTCACCGTGGTGCC",21,96.4,6.23,-4.6,0.69,1.5,1.23,0.02,">1 nonsynonymous","A105D V173A",2
"lib2","SARS-CoV-2","TAGTCACGATAAAAGA",5,41.82,6,-4.84,1.04,3,1.18,0,">1 nonsynonymous","V11N F44L C61L F99I V180M",5
"lib2","SARS-CoV-2","TAGTCACGCCAACCCT",1,1.32,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","TAGTCACGCGAAGGTA",2,0.21,NA,NA,NA,NA,NA,NA,"stop","C6S C61K V71* T85S T100P",5
"lib2","SARS-CoV-2","TAGTCACTAGACTGGT",1,9.65,9.29,-1.54,0.34,1.5,1,0.05,">1 nonsynonymous","D97V T148G V181T",3
"lib2","SARS-CoV-2","TAGTCACTGTTAGCCA",4,134.51,9.25,-1.59,0.05,2.81,1.06,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","TAGTCACTTACGGCAT",2,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L A42T V71K D97K G152T N157G",6
"lib2","SARS-CoV-2","TAGTCAGATTTTCCAG",8,8.71,NA,NA,NA,NA,NA,NA,"stop","S29* R127S",2
"lib2","SARS-CoV-2","TAGTCAGTTTAGAACA",17,208.45,10.75,-0.08,0.03,2.98,1.03,0,">1 nonsynonymous","F62M V153G",2
"lib2","SARS-CoV-2","TAGTCATAAACGCTAA",2,9.34,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","N13L S41P T100Y W106A L188H",5
"lib2","SARS-CoV-2","TAGTCATAAGACCCAT",3,27.21,10.74,-0.1,0.09,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTCATACACAATAA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","N4* N157G",2
"lib2","SARS-CoV-2","TAGTCATCCCTCAGAT",7,11.23,7.03,-3.8,0.64,1.5,1.15,0.05,">1 nonsynonymous","N24I N107E S139L",3
"lib2","SARS-CoV-2","TAGTCATTGGGAGAAC",2,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V C49Y N92F",3
"lib2","SARS-CoV-2","TAGTCCAAATAAGCAA",9,86.32,9.42,-1.42,0.12,1.77,1.07,0.01,"1 nonsynonymous","W23V",1
"lib2","SARS-CoV-2","TAGTCCAACCTACTAT",3,15.96,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56T V77S G86N N110Q P133T",5
"lib2","SARS-CoV-2","TAGTCCAAGGTAGTGA",2,46.96,8.35,-2.49,0.17,2.34,1,0.01,"1 nonsynonymous","Y143K",1
"lib2","SARS-CoV-2","TAGTCCACGGATCTAG",4,36.33,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A14Y Q84E G117S G155K",4
"lib2","SARS-CoV-2","TAGTCCAGACACCGTA",5,0.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C61N",1
"lib2","SARS-CoV-2","TAGTCCAGCGCAGACG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M L38T Y50K A89D S113D F185L",6
"lib2","SARS-CoV-2","TAGTCCATATCCATCT",12,5.13,NA,NA,NA,NA,NA,NA,"stop","E10* A18R",2
"lib2","SARS-CoV-2","TAGTCCCACTATGTTC",10,127.39,10.07,-0.76,0.06,2.62,1.06,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TAGTCCCCATTAACAG",8,29.33,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","R16E S41V L95D",3
"lib2","SARS-CoV-2","TAGTCCCCGAGACAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","N24A Y121*",2
"lib2","SARS-CoV-2","TAGTCCCGAACTATGC",4,16.75,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F99A C150S",2
"lib2","SARS-CoV-2","TAGTCCCGTGGCAAGT",10,94.81,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y159R",1
"lib2","SARS-CoV-2","TAGTCCCTGAGTGAGA",9,6.31,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G74D P96Y N107W Y143M",4
"lib2","SARS-CoV-2","TAGTCCCTTAAACTAC",10,165.43,9.99,-0.84,0.06,2.5,1.04,0,">1 nonsynonymous","L5P A89G K114R",3
"lib2","SARS-CoV-2","TAGTCCGGTTGTTTAT",5,88.32,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","F12K C49L L60T E135V Q176T",5
"lib2","SARS-CoV-2","TAGTCCTACCTTCACG",1,30.23,9.91,-0.92,0.07,2.38,1.04,0,">1 nonsynonymous","P96S A105T S129H",3
"lib2","SARS-CoV-2","TAGTCCTGATTTAGAA",1,5.32,11.03,0.2,0.14,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTCCTTACCAATTG",4,66.88,8.55,-2.29,0.23,1.5,1.1,0.02,">1 nonsynonymous","N107R I142H",2
"lib2","SARS-CoV-2","TAGTCGAATGTTTTCA",2,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L Q84H C102H R127C",4
"lib2","SARS-CoV-2","TAGTCGACTGAAGAAG",3,0,NA,NA,NA,NA,NA,NA,"stop","V37N T55M P96M P149*",4
"lib2","SARS-CoV-2","TAGTCGAGCAGGGACG",3,40.68,10,-0.83,0.1,2.44,1,0,">1 nonsynonymous","L60Y W106I S184N",3
"lib2","SARS-CoV-2","TAGTCGATCAACATTA",2,16.31,9.33,-1.5,0.2,2.14,1.04,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TAGTCGCACAGCCACG",3,48.21,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F8D L162R",2
"lib2","SARS-CoV-2","TAGTCGCCTCGATCTA",3,22.47,6.73,-4.11,0.5,1.5,1.13,0.03,">1 nonsynonymous","G51Y F62L G146Y P197K",4
"lib2","SARS-CoV-2","TAGTCGTATAAATACA",1,19.89,9.5,-1.34,0.09,1.52,1.01,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","TAGTCGTCTTTAAATG",4,94.98,9.8,-1.04,0.07,2.44,1.07,0,">1 nonsynonymous","G9M V65T Q168R",3
"lib2","SARS-CoV-2","TAGTCTACAATATGAG",4,45.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12G R25L D59I K87T N109F Q144T",6
"lib2","SARS-CoV-2","TAGTCTACACAAACAA",9,426.55,10.83,-0.01,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTCTACCGACATGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51S I88N",2
"lib2","SARS-CoV-2","TAGTCTATAACCGGAT",1,28.85,10.75,-0.09,0.08,2.81,1.15,0,">1 nonsynonymous","N1I I28F F47C V173R",4
"lib2","SARS-CoV-2","TAGTCTCCACATACCG",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V P149S",2
"lib2","SARS-CoV-2","TAGTCTCGCAACCACA",8,99.52,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","F8K F17L K87D R136E",4
"lib2","SARS-CoV-2","TAGTCTCGCTATTTCA",7,35.65,8,-2.83,0.21,1.5,1.1,0.02,">1 nonsynonymous","R16G R27C W106L S200N",4
"lib2","SARS-CoV-2","TAGTCTCTAAAGTTAC",15,111.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L60T D68R",2
"lib2","SARS-CoV-2","TAGTCTCTAAGTCATT",1,25.74,10.57,-0.26,0.07,2.91,1.09,0,"1 nonsynonymous","N109M",1
"lib2","SARS-CoV-2","TAGTCTCTATACAGGT",2,76.31,8.73,-2.11,0.19,1.66,1.09,0.01,">1 nonsynonymous","L5F G86C",2
"lib2","SARS-CoV-2","TAGTCTGCCTCACCAA",2,36.19,10.56,-0.27,0.08,2.92,1.04,0,">1 nonsynonymous","K87W L187M",2
"lib2","SARS-CoV-2","TAGTCTGCTTAGATCA",3,42.9,8.12,-2.72,0.38,1.5,1,0.06,">1 nonsynonymous","A105C F134V",2
"lib2","SARS-CoV-2","TAGTCTTATGAATTCT",2,17.46,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","E141Y Y165C",2
"lib2","SARS-CoV-2","TAGTCTTTATCACCAC",1,30.13,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y66A W106Y F167D",3
"lib2","SARS-CoV-2","TAGTCTTTCAACTGAT",2,24.32,10.88,0.05,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTGAAACGGCGACA",2,39.14,6,-4.84,2,2.39,1.2,0,">1 nonsynonymous","A81P Y165S",2
"lib2","SARS-CoV-2","TAGTGAAAGGCAGTAT",4,40.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V20L Y35N A67Y L122C Q176L",5
"lib2","SARS-CoV-2","TAGTGAAAGGTCACTG",6,18.59,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D112F V153G F160T",3
"lib2","SARS-CoV-2","TAGTGAAATCATCTGC",2,72.17,8.74,-2.1,0.05,2.74,1.05,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TAGTGAAGAACACATA",8,69.67,8.53,-2.3,0.13,1.5,1.11,0.01,">1 nonsynonymous","S29V Q84R S139V G155A",4
"lib2","SARS-CoV-2","TAGTGAAGTTGTCAAG",13,121.26,9.21,-1.62,0.24,1.5,1.12,0.03,">1 nonsynonymous","C6G S43I I80M",3
"lib2","SARS-CoV-2","TAGTGAATGAGAGAGC",1,7.37,6.32,-4.52,1.48,3,1.08,0.01,">1 nonsynonymous","V71Q V194I",2
"lib2","SARS-CoV-2","TAGTGACACTGCATGG",9,81.62,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T55D C61T I88Y K128P Q163M S184F",6
"lib2","SARS-CoV-2","TAGTGACATGACACAG",2,8.75,6,-4.84,1.8,1.5,1.08,0.02,">1 nonsynonymous","K128R C150R F160T V181P",4
"lib2","SARS-CoV-2","TAGTGACCCAGGATAA",15,253.85,10.77,-0.07,0.03,2.92,1.09,0,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","TAGTGACTCGAAAAGG",3,24.13,9.72,-1.12,0.12,2.16,1.02,0,">1 nonsynonymous","W106K S139D",2
"lib2","SARS-CoV-2","TAGTGACTGTAGCCAG",2,42.91,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V71R I88P A89T F99L P197S",5
"lib2","SARS-CoV-2","TAGTGAGAGTAGGTCG",1,28.79,6.59,-4.25,0.58,1.5,1.19,0.04,">1 nonsynonymous","S43G Y50K",2
"lib2","SARS-CoV-2","TAGTGAGGAAAGACCT",3,14.83,6,-4.84,2,1.5,1.06,0.06,">1 nonsynonymous","L5R S41L F99I Y121H C158V",5
"lib2","SARS-CoV-2","TAGTGAGTAAGGCCAA",3,6.52,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A22L D90V S129I E186F",4
"lib2","SARS-CoV-2","TAGTGAGTTCCTGTCT",4,0,NA,NA,NA,NA,NA,NA,"stop","N64F A81S T85*",3
"lib2","SARS-CoV-2","TAGTGATAAACACGAT",1,101.05,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","E10I V65T N171D",3
"lib2","SARS-CoV-2","TAGTGATATACAAACT",2,27.4,9.17,-1.67,0.19,1.62,1.15,0.01,"1 nonsynonymous","F70L",1
"lib2","SARS-CoV-2","TAGTGATATGGTCAAC",5,166.03,10.14,-0.69,0.06,2.6,1.04,0,">1 nonsynonymous","Q84F I104V",2
"lib2","SARS-CoV-2","TAGTGATATGTTTCAC",1,2.14,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TAGTGATGTATTGGGG",8,77.98,10.33,-0.51,0.06,2.79,1.09,0,">1 nonsynonymous","K132I S184F",2
"lib2","SARS-CoV-2","TAGTGATGTTTACCAG",7,81.68,10.21,-0.62,0.04,2.99,1.03,0,">1 nonsynonymous","F160W P169V",2
"lib2","SARS-CoV-2","TAGTGATTCTCTGGGA",2,1.31,NA,NA,NA,NA,NA,NA,"stop","K56L G86* Y143F C158F",4
"lib2","SARS-CoV-2","TAGTGCAAAGATATTC",8,42.3,8.13,-2.7,0.15,2.35,1.14,0.01,">1 nonsynonymous","L60S N157L",2
"lib2","SARS-CoV-2","TAGTGCAAGAGTTAAT",8,101.76,6,-4.84,2,2.28,1.15,0,">1 nonsynonymous","A22F T63I D137H",3
"lib2","SARS-CoV-2","TAGTGCAAGCACAGAA",10,144.97,10.71,-0.13,0.03,2.95,1.04,0,">1 nonsynonymous","F47V S129R",2
"lib2","SARS-CoV-2","TAGTGCACTATGCCGT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","F62H E76T P96H T140S S164D P177*",6
"lib2","SARS-CoV-2","TAGTGCACTGACGCCT",6,89.28,7.47,-3.37,0.18,1.5,1.11,0.01,">1 nonsynonymous","A33W A89S L95M N118I",4
"lib2","SARS-CoV-2","TAGTGCCCATTATCGG",5,57.48,7.61,-3.23,0.43,1.5,1.08,0.06,">1 nonsynonymous","E10V T85L W106L V173D",4
"lib2","SARS-CoV-2","TAGTGCCCTCCCTATG",1,1.21,NA,NA,NA,NA,NA,NA,"stop","A105* Y165S",2
"lib2","SARS-CoV-2","TAGTGCCTTAACCAAC",1,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10N W106G",2
"lib2","SARS-CoV-2","TAGTGCGCGAGGTACT",2,43.02,8.93,-1.91,0.1,1.93,1.08,0,">1 nonsynonymous","F62S R179K",2
"lib2","SARS-CoV-2","TAGTGCGGCCCAACTG",7,51.6,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A18E A67D P149L A190P",4
"lib2","SARS-CoV-2","TAGTGCTAATTTGCCG",3,47.25,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R73L S139D G146E T170I",4
"lib2","SARS-CoV-2","TAGTGCTTTGACCCCG",10,188.42,10.67,-0.17,0.03,2.9,1.06,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","TAGTGGACGAGTTTAA",4,10.94,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","C158I T170I G174Y",3
"lib2","SARS-CoV-2","TAGTGGATATCCATCT",1,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86P V181S S200L",3
"lib2","SARS-CoV-2","TAGTGGATCAGTCCAG",2,16.15,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","L38R D59H K87R L95A",4
"lib2","SARS-CoV-2","TAGTGGCACTAACGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* F44G V65K G86L N92Q P133R V180L",7
"lib2","SARS-CoV-2","TAGTGGGTTCAGAACA",12,51,7.8,-3.04,0.35,1.5,1,0.04,">1 nonsynonymous","C61L L95M N107D K198R",4
"lib2","SARS-CoV-2","TAGTGGTTATACAAGG",1,43.2,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N4L G51V R127Q P197G",4
"lib2","SARS-CoV-2","TAGTGTAAGGATCATG",1,64.64,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10P K56V N92P C150F V173D",5
"lib2","SARS-CoV-2","TAGTGTACCAACGAGT",4,35.73,10.69,-0.15,0.03,3,1.01,0,">1 nonsynonymous","G9M V173I",2
"lib2","SARS-CoV-2","TAGTGTATTTATACAA",2,60.12,9.87,-0.97,0.1,2.19,1.03,0,">1 nonsynonymous","S45V K128L",2
"lib2","SARS-CoV-2","TAGTGTTAGAACCACC",4,68.93,8.69,-2.15,0.09,3,1.08,0,"1 nonsynonymous","Y175N",1
"lib2","SARS-CoV-2","TAGTGTTATAAATAGA",3,12.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P82M V103M W106R Y119L",4
"lib2","SARS-CoV-2","TAGTGTTTATATATTT",11,48.55,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C6L I88Y W106L R124I K199Q",5
"lib2","SARS-CoV-2","TAGTTAAAATCGAACG",20,291.01,10.85,0.02,0.03,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTTAAACGATAAAT",7,65.26,8.36,-2.47,0.19,1.9,1.07,0.01,">1 nonsynonymous","T55S Q84W P149T G174T",4
"lib2","SARS-CoV-2","TAGTTAACACCAACAG",7,55.34,10.17,-0.66,0.1,2.38,1.04,0,"1 nonsynonymous","W23P",1
"lib2","SARS-CoV-2","TAGTTAACCTTCACCC",8,156.29,6,-4.84,1.52,1.5,1.17,0.01,">1 nonsynonymous","L5V N30G L38C S45F G146V",5
"lib2","SARS-CoV-2","TAGTTAACTGAGCGGA",1,13.18,6.51,-4.33,0.66,3,1.17,0.01,">1 nonsynonymous","N4T K26G F62L V182E",4
"lib2","SARS-CoV-2","TAGTTAAGCAGCGTCC",6,105.85,8.45,-2.38,0.1,2.91,1.12,0,">1 nonsynonymous","T46A F126A",2
"lib2","SARS-CoV-2","TAGTTAATAAAAGCAC",1,35.1,9.84,-0.99,0.09,1.96,1.07,0,"1 nonsynonymous","F17C",1
"lib2","SARS-CoV-2","TAGTTAATAAAATTCC",7,1.15,NA,NA,NA,NA,NA,NA,"stop","K87T D98*",2
"lib2","SARS-CoV-2","TAGTTAATACTATTGG",4,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S A42I S113A N118S F185H",5
"lib2","SARS-CoV-2","TAGTTAATAGGGAGCT",15,2.47,NA,NA,NA,NA,NA,NA,"stop","A42N F167V G172*",3
"lib2","SARS-CoV-2","TAGTTAATCAATACAA",2,21.26,9.97,-0.87,0.11,2.36,1.02,0,">1 nonsynonymous","C61A I88V Y123W",3
"lib2","SARS-CoV-2","TAGTTACAACGCCGTT",9,10.13,NA,NA,NA,NA,NA,NA,"stop","G9* A105M",2
"lib2","SARS-CoV-2","TAGTTACAGTCGGCCA",10,55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L57N G83S K128T G146L Y178P",5
"lib2","SARS-CoV-2","TAGTTACATAACTCAA",5,87.38,10.07,-0.76,0.09,2.51,1.03,0,">1 nonsynonymous","W106I T201A",2
"lib2","SARS-CoV-2","TAGTTACGAAGCGGAC",8,46.75,7.4,-3.43,0.26,1.5,1.14,0.02,">1 nonsynonymous","L5H V11A T55N W106S",4
"lib2","SARS-CoV-2","TAGTTACTCACCAATA",4,18.23,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D112S R127H E186Q",3
"lib2","SARS-CoV-2","TAGTTAGCCTTGAATA",4,20.21,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y35N S41V N64L P82K Y91G T148M",6
"lib2","SARS-CoV-2","TAGTTAGCTACCTTAA",12,130.59,10.01,-0.83,0.09,1.95,1.06,0,">1 nonsynonymous","Y39S D59E E76G",3
"lib2","SARS-CoV-2","TAGTTAGCTCGACCCT",5,93.1,10.29,-0.55,0.05,2.95,1.09,0,"1 nonsynonymous","E154C",1
"lib2","SARS-CoV-2","TAGTTAGGAAATTAGA",4,60.05,10.93,0.09,0.05,2.96,1.07,0,">1 nonsynonymous","N110T V173L",2
"lib2","SARS-CoV-2","TAGTTAGGCCTACGTA",5,0.12,NA,NA,NA,NA,NA,NA,"stop","T85A G116*",2
"lib2","SARS-CoV-2","TAGTTAGTCATCTATA",6,6.04,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","E10T A18T S69V Y119A",4
"lib2","SARS-CoV-2","TAGTTAGTGAGCTCTC",9,88.45,10.49,-0.35,0.03,2.99,1.03,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","TAGTTATAAGCAAGTT",3,55.31,6.02,-4.81,0.52,1.5,1.12,0.01,">1 nonsynonymous","P54K D90S D112T Y175R",4
"lib2","SARS-CoV-2","TAGTTATCATGATACC",14,82.05,6.24,-4.6,0.83,1.5,1.18,0.03,">1 nonsynonymous","A14G S45A L95H N118T",4
"lib2","SARS-CoV-2","TAGTTATGCTCGCAGT",5,69.59,10.64,-0.19,0.04,2.93,1.07,0,">1 nonsynonymous","G9R N130I",2
"lib2","SARS-CoV-2","TAGTTATTAATAAATC",9,115.89,8.55,-2.29,0.22,1.79,1.15,0.02,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","TAGTTATTAATAGAGA",8,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K D68G P197Q",3
"lib2","SARS-CoV-2","TAGTTATTAGTCTTCT",8,40.78,10.83,0,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTTATTTATTGTCT",6,0.04,NA,NA,NA,NA,NA,NA,"stop","P54T L60* K94M N107L",4
"lib2","SARS-CoV-2","TAGTTCAACGAGGAAC",5,126.99,10.46,-0.37,0.04,2.84,1.05,0,">1 nonsynonymous","D90F S164T",2
"lib2","SARS-CoV-2","TAGTTCAATCAAATGA",1,15.1,10.58,-0.26,0.12,2.77,1.24,0.01,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","TAGTTCAATGACAGTT",4,24.77,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C6S R25I S53Q L183G",4
"lib2","SARS-CoV-2","TAGTTCACAATTATAA",4,62.08,10.87,0.03,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTTCACGCTGCAGT",1,30.96,10.15,-0.68,0.11,2.53,1.07,0.01,"1 nonsynonymous","W106Q",1
"lib2","SARS-CoV-2","TAGTTCAGATACAACC",2,59.21,10.8,-0.03,0.07,2.83,1.15,0,">1 nonsynonymous","L60Q N151S",2
"lib2","SARS-CoV-2","TAGTTCATCCCTCATT",3,15.04,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","I88L S113L G174S",3
"lib2","SARS-CoV-2","TAGTTCATGTTTAGAA",6,1.01,NA,NA,NA,NA,NA,NA,"stop","T15N K26R I104H Y119*",4
"lib2","SARS-CoV-2","TAGTTCCAAAGTCCAT",3,23.99,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y50H L57K S147E G174T L183T",5
"lib2","SARS-CoV-2","TAGTTCCATTCGGGGT",6,35.53,10.66,-0.18,0.04,2.93,1.09,0,"1 nonsynonymous","Q163W",1
"lib2","SARS-CoV-2","TAGTTCCGCAGGACCT",11,83.54,6.26,-4.58,0.36,1.98,1.17,0.01,">1 nonsynonymous","S19V S41R C61V P149V",4
"lib2","SARS-CoV-2","TAGTTCCGGAAATACC",4,137.46,10.77,-0.07,0.06,2.96,1.06,0,"1 nonsynonymous","K114R",1
"lib2","SARS-CoV-2","TAGTTCCTAAGATATT",8,103.33,9.77,-1.07,0.07,2.09,1.07,0,">1 nonsynonymous","N4I Q84R F134T P197S",4
"lib2","SARS-CoV-2","TAGTTCCTGTGATACT",22,3.23,NA,NA,NA,NA,NA,NA,"stop","F70V W106* P149H V153G N171D",5
"lib2","SARS-CoV-2","TAGTTCCTTCTGGACC",3,0.68,NA,NA,NA,NA,NA,NA,"stop","G9L P54* P96I",3
"lib2","SARS-CoV-2","TAGTTCGAATAAATAA",8,254.38,10.39,-0.44,0.04,2.94,1.07,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TAGTTCGATGTCAAGA",4,55.41,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","I28T C49T",2
"lib2","SARS-CoV-2","TAGTTCGGCTCTTTAT",5,27.15,6.3,-4.53,0.91,1.5,1.28,0.06,">1 nonsynonymous","S41L V65S P96R A105L L125T H189I",6
"lib2","SARS-CoV-2","TAGTTCTATGACAAAA",1,9.83,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P82L G155V",2
"lib2","SARS-CoV-2","TAGTTCTGACATCTAT",4,27.13,6.01,-4.83,1.54,1.5,1.14,0.03,">1 nonsynonymous","A42I P82G R124K T148A F160V",5
"lib2","SARS-CoV-2","TAGTTCTGATGCATGG",12,81.24,6.16,-4.67,0.63,1.5,1.17,0.01,">1 nonsynonymous","A33T L131E T140M",3
"lib2","SARS-CoV-2","TAGTTCTGGAAAAAGT",3,1.83,NA,NA,NA,NA,NA,NA,"stop","R25S D98S S113* G152D S200T",5
"lib2","SARS-CoV-2","TAGTTCTGTAATCGTC",5,69.21,10.01,-0.83,0.04,2.74,1.06,0,">1 nonsynonymous","F44S Q84I L125M",3
"lib2","SARS-CoV-2","TAGTTGAAATGTAGCA",2,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51Q I72D P96M",3
"lib2","SARS-CoV-2","TAGTTGAACTAGACCT",4,21.64,10.21,-0.63,0.07,3,1,0,">1 nonsynonymous","S43N G83N P133D V173I T201Q",5
"lib2","SARS-CoV-2","TAGTTGACGGCGCAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","S41I I104*",2
"lib2","SARS-CoV-2","TAGTTGATATCGTAGT",5,34.1,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D59Y Y93N V103L R127C",4
"lib2","SARS-CoV-2","TAGTTGCGTTGCTAAA",5,46.05,10.6,-0.24,0.04,2.88,1.15,0,">1 nonsynonymous","V11L T46H C61K T85S",4
"lib2","SARS-CoV-2","TAGTTGCTAAGTGCCG",5,0,NA,NA,NA,NA,NA,NA,"stop","S36I S41* T55W D97L L122F S129M",6
"lib2","SARS-CoV-2","TAGTTGGCATCTCATA",15,247.08,10.8,-0.04,0.05,2.91,1.09,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","TAGTTGGCTCTGATAT",12,59.74,10.72,-0.12,0.05,2.95,1.02,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","TAGTTGGTACATACAA",1,25.74,10.29,-0.55,0.04,3,1.01,0,"1 nonsynonymous","S113G",1
"lib2","SARS-CoV-2","TAGTTGTGGGGTGAAA",8,162.29,9.76,-1.08,0.06,2.21,1.03,0,">1 nonsynonymous","L38P A192E",2
"lib2","SARS-CoV-2","TAGTTGTTCTTGACAT",3,6.25,9,-1.84,0.37,1.5,1.02,0.05,"1 nonsynonymous","D137G",1
"lib2","SARS-CoV-2","TAGTTGTTTCATGCGT",8,47.21,8.66,-2.18,0.22,1.5,1.18,0.02,"1 nonsynonymous","D68S",1
"lib2","SARS-CoV-2","TAGTTGTTTTTTTTGC",2,22.88,7.76,-3.07,0.41,1.5,1,0.05,">1 nonsynonymous","N58T Y93I",2
"lib2","SARS-CoV-2","TAGTTTAACACTAGTA",7,75.14,7.43,-3.4,0.11,1.92,1.05,0,"1 nonsynonymous","C150V",1
"lib2","SARS-CoV-2","TAGTTTAATAGATCCG",14,56.01,6.18,-4.66,0.61,1.5,1.28,0.02,">1 nonsynonymous","F62M A105P S113K P149S",4
"lib2","SARS-CoV-2","TAGTTTACCGGATTAC",5,161.45,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A89P Q176I T201Y",3
"lib2","SARS-CoV-2","TAGTTTAGAACATTAC",3,84.19,10.72,-0.12,0.06,2.87,1.14,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","TAGTTTAGGTCTGAAG",2,10.91,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","L5K K48P K198V",3
"lib2","SARS-CoV-2","TAGTTTATAGTTGCAT",3,22.96,10.51,-0.33,0.05,2.93,1.07,0,">1 nonsynonymous","A33P T140M",2
"lib2","SARS-CoV-2","TAGTTTATCCAATCGT",4,7.3,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50S T55K Y91S T148C",4
"lib2","SARS-CoV-2","TAGTTTCAAGGTATGA",3,3.77,NA,NA,NA,NA,NA,NA,"stop","C49F P82Y F99L Y119P C150*",5
"lib2","SARS-CoV-2","TAGTTTCAGGGACATA",4,89,10.36,-0.48,0.03,2.95,1.05,0,">1 nonsynonymous","T3F Y35L C49W N58T",4
"lib2","SARS-CoV-2","TAGTTTCATTAACAGC",6,46.15,6,-4.84,1.04,1.5,1.1,0.01,">1 nonsynonymous","Y21K G83M F134E E141V G174L",5
"lib2","SARS-CoV-2","TAGTTTGAAGGAAAAA",1,5.36,8.13,-2.71,0.37,2.32,1.37,0.04,">1 nonsynonymous","T15W Y39H L111I G116L",4
"lib2","SARS-CoV-2","TAGTTTGAATAACTAC",13,36.78,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","P82M D98L G116A N130L",4
"lib2","SARS-CoV-2","TAGTTTGACGCTGAAG",2,79.98,10.8,-0.03,0.04,2.93,1.06,0,"1 nonsynonymous","L5R",1
"lib2","SARS-CoV-2","TAGTTTGATCAAATTG",2,49.44,10.83,0,0.06,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTTTGATGGTACAA",3,97.31,10.87,0.03,0.06,2.83,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TAGTTTGGAACAAAAC",9,93.47,9.35,-1.49,0.04,2.88,1.13,0,">1 nonsynonymous","T63R L125N E154M",3
"lib2","SARS-CoV-2","TAGTTTGGGTGGTCTC",10,2.63,NA,NA,NA,NA,NA,NA,"stop","F44I D97*",2
"lib2","SARS-CoV-2","TAGTTTTACATTAATC",5,77.3,8.43,-2.41,0.13,2.73,1.08,0.01,"1 nonsynonymous","S113I",1
"lib2","SARS-CoV-2","TAGTTTTCCCTCAACG",4,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83P P133T L183S P197W",4
"lib2","SARS-CoV-2","TAGTTTTCTCTTCCCT",1,16.01,6,-4.84,2,1.5,1.11,0.02,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","TAGTTTTGATTTTCTA",2,10.76,6,-4.84,2,3,1.04,0.01,">1 nonsynonymous","G101I N118D",2
"lib2","SARS-CoV-2","TAGTTTTGCACTTATA",3,56.94,8.9,-1.93,0.08,1.78,1.1,0,">1 nonsynonymous","N58L G116Y I138H",3
"lib2","SARS-CoV-2","TAGTTTTGGGCAAGGG",10,101.93,10.55,-0.29,0.04,2.93,1.06,0,">1 nonsynonymous","F62T N120L",2
"lib2","SARS-CoV-2","TAGTTTTGTAAATTCA",2,89.09,10.28,-0.56,0.04,2.91,1.09,0,"1 nonsynonymous","N118Q",1
"lib2","SARS-CoV-2","TATAAAAAAAGGTTAA",2,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24T L57A D112W",3
"lib2","SARS-CoV-2","TATAAAAAAATACATA",7,60.51,10.68,-0.16,0.04,2.9,1.08,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","TATAAAAAACGTTTAT",9,91.99,10.76,-0.08,0.04,2.95,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TATAAAAAAGCAGCAG",1,13.43,10.84,0,0.05,2.96,1.07,0,"1 nonsynonymous","T140K",1
"lib2","SARS-CoV-2","TATAAAAACTGTTCAT",4,42.38,10.89,0.05,0.06,3,1.03,0,"1 nonsynonymous","P54L",1
"lib2","SARS-CoV-2","TATAAAAACTTCTTGC",7,19.99,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15C N64R G86A G101C W106A T170F",6
"lib2","SARS-CoV-2","TATAAAAAGCTAGGAA",1,51.38,10.82,-0.02,0.07,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAAAATTATATGA",6,41.17,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37D K48Q T55C I72Q P197K",5
"lib2","SARS-CoV-2","TATAAAACAACTATAG",3,37.55,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35S S69V Y175E",3
"lib2","SARS-CoV-2","TATAAAACACATTAAC",8,165.12,10.33,-0.51,0.04,2.94,1.07,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TATAAAACCAATAGGT",2,25.43,10.78,-0.06,0.06,2.94,1.08,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","TATAAAACCGGTATGA",1,8.12,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W23V S43R F160M",3
"lib2","SARS-CoV-2","TATAAAACCTCTGACC",10,318.44,10.4,-0.43,0.04,2.9,1.07,0,">1 nonsynonymous","E141V P149I",2
"lib2","SARS-CoV-2","TATAAAACGTATGTCA",8,59.19,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","D112W",1
"lib2","SARS-CoV-2","TATAAAACGTCAAGAA",2,6.9,10.57,-0.27,0.14,2.77,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TATAAAACGTCTAAGT",6,44.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G146R P149W L162K",3
"lib2","SARS-CoV-2","TATAAAACTCCAGTAC",3,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L L188G",2
"lib2","SARS-CoV-2","TATAAAAGAAATATGT",9,199.42,10.7,-0.13,0.03,2.95,1.03,0,">1 nonsynonymous","K26S K198M",2
"lib2","SARS-CoV-2","TATAAAAGCAAGCCTT",10,173.39,10.86,0.03,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAAAGGGTTGCTG",4,1.16,NA,NA,NA,NA,NA,NA,"stop","N1* C31V",2
"lib2","SARS-CoV-2","TATAAAAGTCTTCTGT",1,15.73,6,-4.84,2,3,1.15,0,">1 nonsynonymous","K87S D97V D112H",3
"lib2","SARS-CoV-2","TATAAAAGTGGATAAA",10,168.2,9.27,-1.56,0.04,2.87,1.14,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TATAAAATAAAGGACA",8,84.64,8.85,-1.99,0.08,2.97,1.09,0,"1 nonsynonymous","F126R",1
"lib2","SARS-CoV-2","TATAAAATAAATAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10G Y35V F44A L60P Y165*",5
"lib2","SARS-CoV-2","TATAAAATAACTACAA",5,28.73,8.28,-2.56,0.2,1.99,1.1,0.02,"1 nonsynonymous","D112A",1
"lib2","SARS-CoV-2","TATAAAATAATGTTGG",6,80.57,10.86,0.02,0.04,2.95,1.07,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","TATAAAATACAGTGTT",3,1.2,NA,NA,NA,NA,NA,NA,"stop","I88A Y119*",2
"lib2","SARS-CoV-2","TATAAAATATACTTAA",6,76.36,10.19,-0.65,0.03,2.98,1.04,0,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","TATAAAATCGACGGTC",2,20.14,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C31V L60S L122W L162D",4
"lib2","SARS-CoV-2","TATAAAATGTAGTCCC",3,1073.1,9.98,-0.86,0.05,2.21,1.01,0,"1 nonsynonymous","W106A",1
"lib2","SARS-CoV-2","TATAAAATTAGACGTG",9,102.23,6.73,-4.1,0.31,1.5,1.13,0.02,">1 nonsynonymous","L60D N107I",2
"lib2","SARS-CoV-2","TATAAAATTCAGTAAC",3,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N C49V P191I",3
"lib2","SARS-CoV-2","TATAAAATTCTAAGTT",1,6.91,8.72,-2.12,0.28,1.89,1.16,0.02,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","TATAAAATTTAAGTAA",1,12.88,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","P54M Q84C A89N C150R A192C",5
"lib2","SARS-CoV-2","TATAAACAAATAATAC",2,11.08,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","F8C S19Q C102I P149R",4
"lib2","SARS-CoV-2","TATAAACAAGCGCAAA",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N F70L Q84R K94A T201M",5
"lib2","SARS-CoV-2","TATAAACACTCAGTAA",21,186.25,6.43,-4.41,0.46,1.5,1.17,0.02,">1 nonsynonymous","C6N V37Y S45L N130E P149L P197S",6
"lib2","SARS-CoV-2","TATAAACAGGCACTAT",1,1.03,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","TATAAACATAACATAG",10,27.48,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R124A G146V P161S",3
"lib2","SARS-CoV-2","TATAAACATGCACACG",2,10.72,10.82,-0.01,0.3,2.8,1.05,0.07,">1 nonsynonymous","T3N K48V E154K T201L",4
"lib2","SARS-CoV-2","TATAAACCAGAATGGC",5,6.74,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","R16S A89H V103M S129R T201S",5
"lib2","SARS-CoV-2","TATAAACCAGTTCTTG",4,41.43,10.59,-0.25,0.04,2.89,1.07,0,">1 nonsynonymous","Q84L T201N",2
"lib2","SARS-CoV-2","TATAAACCATCCGGCT",9,1.18,NA,NA,NA,NA,NA,NA,"stop","L122* G174L",2
"lib2","SARS-CoV-2","TATAAACCCATGAGCT",12,169.84,7.21,-3.63,0.18,1.5,1.07,0.01,">1 nonsynonymous","S113D N120L",2
"lib2","SARS-CoV-2","TATAAACCCGAGCGGT",1,17.08,9.69,-1.15,0.14,2.08,1.03,0.01,">1 nonsynonymous","D34S R136S",2
"lib2","SARS-CoV-2","TATAAACCCGGATAGT",9,48.82,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","T3L G9R P82L P149N",4
"lib2","SARS-CoV-2","TATAAACCGACAGCTG",1,22.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2G R25P Y119C F126V P149R E154S",6
"lib2","SARS-CoV-2","TATAAACCTATAAAAA",2,23.83,10.53,-0.3,0.07,2.91,1.08,0,">1 nonsynonymous","S41Q T46V T63S G83N D97N",5
"lib2","SARS-CoV-2","TATAAACGCACCGGTA",1,0.62,NA,NA,NA,NA,NA,NA,"stop","N13R T100*",2
"lib2","SARS-CoV-2","TATAAACGGGAAACCT",2,8.55,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","Y50W V181G",2
"lib2","SARS-CoV-2","TATAAACTATCTGGTA",11,20.34,6.12,-4.72,0.54,3,1.32,0.01,">1 nonsynonymous","Y35S L60R D97R D137L",4
"lib2","SARS-CoV-2","TATAAACTTAAAGAAT",8,0.75,NA,NA,NA,NA,NA,NA,"stop","N1* I80S F99H",3
"lib2","SARS-CoV-2","TATAAACTTATGTACT",3,58.69,10.28,-0.55,0.03,3,1.01,0,">1 nonsynonymous","L5Y N58S K87L",3
"lib2","SARS-CoV-2","TATAAAGAAAACATAG",5,37.12,9.55,-1.29,0.1,1.76,1.08,0,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","TATAAAGAAAGGGAGT",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66V E141H",2
"lib2","SARS-CoV-2","TATAAAGACGTGAGGC",4,128.83,10.64,-0.19,0.04,2.88,1.11,0,">1 nonsynonymous","T55F T63V",2
"lib2","SARS-CoV-2","TATAAAGAGTCCAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T A105M",2
"lib2","SARS-CoV-2","TATAAAGAGTTGCCAT",5,13.58,8.55,-2.28,0.33,1.53,1.05,0.05,">1 nonsynonymous","V20G T140K E186S",3
"lib2","SARS-CoV-2","TATAAAGATGACATGG",8,107.76,10.2,-0.64,0.07,2.7,1.02,0,">1 nonsynonymous","G9L N40L",2
"lib2","SARS-CoV-2","TATAAAGCATGTATCC",9,78.67,8.91,-1.92,0.16,1.8,1.16,0.01,">1 nonsynonymous","T100D G152I",2
"lib2","SARS-CoV-2","TATAAAGCGCACCATC",12,15.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13S S41C V65R",3
"lib2","SARS-CoV-2","TATAAAGCGGGATTCT",6,125.43,10.8,-0.04,0.07,2.89,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAAGGAATAAATT",12,111.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5D D68L",2
"lib2","SARS-CoV-2","TATAAAGGCTTCGAGC",5,76.35,10.64,-0.2,0.02,2.96,1.03,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","TATAAAGGGTGTCACG",1,16.01,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A18M Y35R N58Q L95K",4
"lib2","SARS-CoV-2","TATAAAGTAACCACAT",4,37.23,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","E10G D34K N107Y G146R",4
"lib2","SARS-CoV-2","TATAAAGTATACAGGT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K94D",1
"lib2","SARS-CoV-2","TATAAAGTCGAGGCAA",7,8.52,NA,NA,NA,NA,NA,NA,"stop","K56* G83S Q144L K198S",4
"lib2","SARS-CoV-2","TATAAAGTGAAATTAA",5,40.99,6,-4.84,2,1.5,1.24,0.03,"1 nonsynonymous","V180S",1
"lib2","SARS-CoV-2","TATAAAGTTGAGTGTG",8,4.23,NA,NA,NA,NA,NA,NA,"stop","T63* A67T D68R D97N L162Y",5
"lib2","SARS-CoV-2","TATAAAGTTTGCTTTC",3,0.72,NA,NA,NA,NA,NA,NA,"stop","A18V N30* G83V K87G S129R A145Q N151L",7
"lib2","SARS-CoV-2","TATAAATAAAAAAACA",3,38.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3M A14G K94D S129D Q176R",5
"lib2","SARS-CoV-2","TATAAATAAAGATCAG",3,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V N64K T100H P149R",4
"lib2","SARS-CoV-2","TATAAATAATAACCGA",1,19.24,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","K128V C150D",2
"lib2","SARS-CoV-2","TATAAATAGATGGCTG",1,55.69,10.69,-0.14,0.03,2.94,1.07,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","TATAAATAGGCCTACC",4,46.87,8.38,-2.45,0.09,2.71,1.07,0,">1 nonsynonymous","L5T N110G Y119H T170L",4
"lib2","SARS-CoV-2","TATAAATATAAAAAAT",2,12.22,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58S I80T A105E P133R",4
"lib2","SARS-CoV-2","TATAAATATATTCTAA",7,45.08,8.97,-1.86,0.07,2.9,1.07,0,">1 nonsynonymous","V37T G117L S184C",3
"lib2","SARS-CoV-2","TATAAATCAAGCGTCC",5,71.83,9.32,-1.51,0.07,2.57,1.06,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","TATAAATCGCAGGTGG",7,37.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G V65F K87S",3
"lib2","SARS-CoV-2","TATAAATCGGTCAACG",2,0.11,NA,NA,NA,NA,NA,NA,"stop","Y39T S45I K132Y F167*",4
"lib2","SARS-CoV-2","TATAAATCTATGTTCA",10,136.39,10.83,0,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAATGACCACGGA",7,98.09,10.89,0.06,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAATGCCCGACAA",5,32.36,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","F8G G86R L95C G101L T140L",5
"lib2","SARS-CoV-2","TATAAATGCCTGGTAG",4,38.29,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A67F G101N N107F C150G R179A S200I",6
"lib2","SARS-CoV-2","TATAAATGTACCAACA",1,32.77,9.21,-1.63,0.19,1.52,1.04,0.02,"1 nonsynonymous","F70L",1
"lib2","SARS-CoV-2","TATAAATGTTTTCAAA",2,39.57,10.68,-0.16,0.05,2.86,1.18,0,">1 nonsynonymous","C61S T201S",2
"lib2","SARS-CoV-2","TATAAATTAACGAACG",5,125.11,8.35,-2.49,0.15,2.48,1.11,0.01,">1 nonsynonymous","T3S G146I",2
"lib2","SARS-CoV-2","TATAAATTCGAGTTAT",2,14.49,10.87,0.03,0.1,2.95,1.05,0.01,">1 nonsynonymous","K48I N171F",2
"lib2","SARS-CoV-2","TATAAATTTCCTGCTT",11,23.61,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L57G P96S N130I F167G V194A",5
"lib2","SARS-CoV-2","TATAACAAAAAGATGT",5,53.03,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G9H V103H",2
"lib2","SARS-CoV-2","TATAACAAAAATTCAG",5,91.3,10.82,-0.01,0.05,3,1.02,0,">1 nonsynonymous","L95V D98N",2
"lib2","SARS-CoV-2","TATAACAAAAGCTGAC",12,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R H189Y",2
"lib2","SARS-CoV-2","TATAACAAAATATCAA",5,99.04,9.19,-1.65,0.04,2.88,1.12,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TATAACAAAGCCAAAA",9,107.3,10.85,0.01,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAACAAAGCGAAAT",8,93.35,8.13,-2.7,0.27,1.5,1.14,0.03,">1 nonsynonymous","F44D G51F S113A L122C",4
"lib2","SARS-CoV-2","TATAACAAATACGCCA",4,28.79,10.05,-0.79,0.07,2.62,1.03,0,">1 nonsynonymous","L5A A14E L95M",3
"lib2","SARS-CoV-2","TATAACAAATTTAATA",5,0.41,NA,NA,NA,NA,NA,NA,"stop","A33S Y119* F160C",3
"lib2","SARS-CoV-2","TATAACAACACCAGAT",7,134.72,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K87A G101L G117D F126K S139C",5
"lib2","SARS-CoV-2","TATAACAAGAGTGGAT",2,25.1,7.7,-3.14,0.23,1.53,1.11,0.02,">1 nonsynonymous","S45T D112I Y119V T201I",4
"lib2","SARS-CoV-2","TATAACACAACAAATA",3,50.05,9.85,-0.98,0.07,2.96,1.08,0,">1 nonsynonymous","L125V K199I",2
"lib2","SARS-CoV-2","TATAACACACAAAACA",13,142.17,7.63,-3.21,0.07,1.83,1.09,0,">1 nonsynonymous","E154R C158M",2
"lib2","SARS-CoV-2","TATAACACATCTAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35N I138S F160K P197*",4
"lib2","SARS-CoV-2","TATAACACCATATAAT",5,40.31,10.83,-0.01,0.07,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAACACCCACTAGA",1,16.11,9.77,-1.07,0.12,2.78,1.06,0,">1 nonsynonymous","N130S G155N P169K",3
"lib2","SARS-CoV-2","TATAACACGAGTTTAT",2,12.31,10.78,-0.05,0.16,2.87,1.08,0.01,">1 nonsynonymous","N4D V37S F62A K114H",4
"lib2","SARS-CoV-2","TATAACACTAAAAACA",13,68.68,6.02,-4.81,0.96,1.5,1.18,0.02,">1 nonsynonymous","L38T Q144F N151F",3
"lib2","SARS-CoV-2","TATAACACTGTATCTT",4,51.72,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25T T46P F99S G146S",4
"lib2","SARS-CoV-2","TATAACAGAAATATGA",3,125.07,10.77,-0.07,0.03,2.98,1.03,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","TATAACAGAAGCTTCC",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R R27D Y91G F160C",4
"lib2","SARS-CoV-2","TATAACAGACTGGTAA",5,93.54,10.68,-0.16,0.05,2.93,1.07,0,">1 nonsynonymous","K114V N151F",2
"lib2","SARS-CoV-2","TATAACATAAATCGTA",13,9.37,7.01,-3.83,0.41,2.15,1.31,0.04,">1 nonsynonymous","F8T D34T D90T",3
"lib2","SARS-CoV-2","TATAACATACATGTGA",5,135.14,10.44,-0.4,0.04,2.87,1.08,0,">1 nonsynonymous","L122S R127S",2
"lib2","SARS-CoV-2","TATAACATAGTATATA",12,251.27,9.54,-1.29,0.05,2.62,1.08,0,">1 nonsynonymous","D90L T100S F156Y",3
"lib2","SARS-CoV-2","TATAACATATTTTTCC",1,29.79,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","Y39P C49Y G86D D97L P177Q K198S",6
"lib2","SARS-CoV-2","TATAACATCAACTCTG",4,80.33,9.32,-1.52,0.06,2.87,1.1,0,"1 nonsynonymous","G155P",1
"lib2","SARS-CoV-2","TATAACATCCACAGGC",17,0.47,NA,NA,NA,NA,NA,NA,"stop","K87I N110M T170*",3
"lib2","SARS-CoV-2","TATAACATCCATTACA",8,57.77,8.98,-1.86,0.14,1.83,1.08,0.01,">1 nonsynonymous","L5P E10C S41V T85P T201K",5
"lib2","SARS-CoV-2","TATAACATGTGTATAA",3,53.05,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V65W G116Y I142T F167S",4
"lib2","SARS-CoV-2","TATAACATTCAGGTGT",2,11.59,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15V Y21A F47C D59C",4
"lib2","SARS-CoV-2","TATAACCAGCACTAAT",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F L122A V181A",3
"lib2","SARS-CoV-2","TATAACCCCACAAAGT",3,54.97,10.79,-0.05,0.08,2.97,1.06,0,"1 nonsynonymous","S200Y",1
"lib2","SARS-CoV-2","TATAACCCCAGTTTAC",3,2.55,NA,NA,NA,NA,NA,NA,"stop","Y39* F156S Q176E",3
"lib2","SARS-CoV-2","TATAACCCGTTTGTAC",15,107.53,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A105E P133S",2
"lib2","SARS-CoV-2","TATAACCGAGACTTGG",4,96.63,8.75,-2.08,0.06,2.52,1.05,0,">1 nonsynonymous","K87G I104C A145T",3
"lib2","SARS-CoV-2","TATAACCGCCCATTAA",2,23.9,10.61,-0.23,0.06,2.87,1.14,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","TATAACCTAGATGGTT",2,35.91,10.95,0.12,0.07,2.99,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TATAACCTGCGAAAAC",10,90.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58S R124Y V173C",3
"lib2","SARS-CoV-2","TATAACCTTGCTTTAA",1,31.51,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","F8A W23K D68W Y121V K128S",5
"lib2","SARS-CoV-2","TATAACGAATCACAAT",2,13.39,10.74,-0.1,0.07,2.93,1.08,0,">1 nonsynonymous","G9R Q163I",2
"lib2","SARS-CoV-2","TATAACGACATATATG",6,31.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y W106T",2
"lib2","SARS-CoV-2","TATAACGACCAGTTTT",3,98.64,9.67,-1.16,0.07,2.83,1.07,0,">1 nonsynonymous","C61G T100S T170S",3
"lib2","SARS-CoV-2","TATAACGCAAATATTG",2,25.13,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V37H V77W Y178F L183D",4
"lib2","SARS-CoV-2","TATAACGCGTAAGACT",4,20.14,9.8,-1.04,0.13,2.41,1.04,0.01,">1 nonsynonymous","C6R T63E",2
"lib2","SARS-CoV-2","TATAACGTATATCTTC",5,245.17,10.59,-0.25,0.02,2.89,1.07,0,"1 nonsynonymous","D34N",1
"lib2","SARS-CoV-2","TATAACGTCAATTTCC",2,6.86,10.57,-0.27,0.11,2.97,1.07,0,"1 nonsynonymous","P149C",1
"lib2","SARS-CoV-2","TATAACGTCCACATCA",9,86.21,9.54,-1.29,0.07,2,1.04,0,">1 nonsynonymous","T3D F12C",2
"lib2","SARS-CoV-2","TATAACGTTTCAATAT",5,35.16,6,-4.84,1.36,1.5,1.14,0.02,">1 nonsynonymous","L57F W106L G117A",3
"lib2","SARS-CoV-2","TATAACTAAATCCGAT",5,18.31,9.6,-1.24,0.21,1.64,1.14,0.03,">1 nonsynonymous","Q84L Y91V",2
"lib2","SARS-CoV-2","TATAACTAACAAGATA",1,24.66,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","T46N V180S",2
"lib2","SARS-CoV-2","TATAACTAATTCTAGA",6,9.37,6,-4.84,2,1.84,1.14,0.05,">1 nonsynonymous","F70T G83S Y143S",3
"lib2","SARS-CoV-2","TATAACTAGTCAGAAA",1,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D F99S R127K",3
"lib2","SARS-CoV-2","TATAACTCAAATACCT",4,57.78,9.48,-1.35,0.09,2.13,1.1,0,"1 nonsynonymous","L162H",1
"lib2","SARS-CoV-2","TATAACTGAACATATA",1,60.38,10.39,-0.45,0.07,2.87,1.13,0,"1 nonsynonymous","T170S",1
"lib2","SARS-CoV-2","TATAACTGATTTATAC",3,109.08,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","P149T T170G Y175T",3
"lib2","SARS-CoV-2","TATAACTGTTTAGGTA",4,26.23,9.18,-1.66,0.05,2.98,1.03,0,"1 nonsynonymous","G166M",1
"lib2","SARS-CoV-2","TATAACTTATAGACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S Y91N W106V G174R",4
"lib2","SARS-CoV-2","TATAACTTCTAAGCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22L L60V K199T",3
"lib2","SARS-CoV-2","TATAACTTGAATATTG",7,29.26,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","F47H Y91P T100K L122K C158T T170V",6
"lib2","SARS-CoV-2","TATAACTTGGGCCGGC",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","TATAAGAACAGAATCC",2,124.12,10.78,-0.06,0.05,3,1.02,0,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","TATAAGAAGATTCGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80R G101L",2
"lib2","SARS-CoV-2","TATAAGAATACTTTGA",2,32.47,9.83,-1,0.11,2.15,1.05,0,">1 nonsynonymous","T3L F17S Y35L T46L D59G",5
"lib2","SARS-CoV-2","TATAAGAATTTTGATC",6,112.55,10.64,-0.19,0.03,2.99,1,0,">1 nonsynonymous","N40G R136C P197L",3
"lib2","SARS-CoV-2","TATAAGACAGTTAACA",1,0.58,NA,NA,NA,NA,NA,NA,"stop","C6* D98G F167V V173G",4
"lib2","SARS-CoV-2","TATAAGACCAAAATAC",5,50.02,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37S S45F G86C T140L",4
"lib2","SARS-CoV-2","TATAAGACCCCTTGTC",1,17.28,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F8M D34W F44G Y91F V182M",5
"lib2","SARS-CoV-2","TATAAGACCGATGAAT",2,24.8,6,-4.84,2,3,1.06,0,">1 nonsynonymous","N4A D112S R136W",3
"lib2","SARS-CoV-2","TATAAGACGGACCTCA",2,39.67,9.95,-0.88,0.09,2.24,1.14,0,">1 nonsynonymous","K26M N120E Q163P",3
"lib2","SARS-CoV-2","TATAAGATAAAAATTA",7,36.18,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I72M N92K D98V N107I S200F",5
"lib2","SARS-CoV-2","TATAAGATCAGACATT",2,11.67,10.74,-0.09,0.05,2.77,1.27,0,"1 nonsynonymous","N151D",1
"lib2","SARS-CoV-2","TATAAGATTATCATGA",3,11.45,9.25,-1.59,0.17,1.79,1.04,0.01,">1 nonsynonymous","A14W K87W",2
"lib2","SARS-CoV-2","TATAAGCAGTTCGAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T F47H S53F T100A D112S",5
"lib2","SARS-CoV-2","TATAAGCATAGTAAGA",14,213.21,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C6M F62L W106R K114G F156L P161I V194I",7
"lib2","SARS-CoV-2","TATAAGCATTTTATAT",9,51.69,6.49,-4.34,0.42,1.5,1.14,0.01,">1 nonsynonymous","E10S T55D R179A",3
"lib2","SARS-CoV-2","TATAAGCCACCCATCT",5,1.11,NA,NA,NA,NA,NA,NA,"stop","S29* A145Y G172F",3
"lib2","SARS-CoV-2","TATAAGCCGCACCAGA",11,4.62,NA,NA,NA,NA,NA,NA,"stop","S19* F62T D98H",3
"lib2","SARS-CoV-2","TATAAGCGAGCAGAAA",17,146.95,6.31,-4.53,0.56,1.5,1.24,0.02,">1 nonsynonymous","G51V E141R L162V T201K",4
"lib2","SARS-CoV-2","TATAAGCGCTTCTACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L L38R V115N",3
"lib2","SARS-CoV-2","TATAAGCTAGTATAAA",2,12.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77A Y121F K132G",3
"lib2","SARS-CoV-2","TATAAGCTATACTACA",1,70.21,10.86,0.03,0.05,2.95,1.05,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","TATAAGCTCGCTTCCC",1,0.35,NA,NA,NA,NA,NA,NA,"stop","N1* W106D",2
"lib2","SARS-CoV-2","TATAAGCTGAGAACAA",14,101.59,9.93,-0.91,0.06,2.15,1.08,0,">1 nonsynonymous","S45H G51R Y91F T100N",4
"lib2","SARS-CoV-2","TATAAGCTTTTACAGA",2,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S I28E N40H K56F T85D E135K L183F",7
"lib2","SARS-CoV-2","TATAAGGAAATAGTAG",2,45.01,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A14T T100A R127P",3
"lib2","SARS-CoV-2","TATAAGGAAGCCTTGA",2,42.17,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F44N T140G G146L",3
"lib2","SARS-CoV-2","TATAAGGAATATAGCA",1,73.22,10.25,-0.59,0.05,2.81,1.05,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","TATAAGGACCTTGATA",3,24.45,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N1A G9Q V20M C49N N157T Y165L",6
"lib2","SARS-CoV-2","TATAAGGACGTAAAAC",1,48.68,8.36,-2.47,0.1,2.88,1.01,0,">1 nonsynonymous","A105S Y175C",2
"lib2","SARS-CoV-2","TATAAGGACTGACCTA",4,29.8,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","L5R Y50F P96F P149T",4
"lib2","SARS-CoV-2","TATAAGGACTTGGGTA",2,79.17,10.18,-0.66,0.03,2.96,1.05,0,">1 nonsynonymous","S43G G166A",2
"lib2","SARS-CoV-2","TATAAGGATAAGAAAT",1,2.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","TATAAGGATTACACAA",5,44.41,9.67,-1.16,0.09,2.32,1.05,0,">1 nonsynonymous","C6P S41F I104M V115R",4
"lib2","SARS-CoV-2","TATAAGGCACCTAGTA",7,87.37,6,-4.84,2,3,1.15,0,">1 nonsynonymous","Y39W Y50L C102T L187V",4
"lib2","SARS-CoV-2","TATAAGGTTAGAGTTA",1,31.24,6,-4.84,1.05,3,1.09,0,">1 nonsynonymous","G9R F44W S129I G146T V182Y",5
"lib2","SARS-CoV-2","TATAAGTACAAAAGCG",1,19.59,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54G C61M P96F N120A F156I T201Q",6
"lib2","SARS-CoV-2","TATAAGTATACAATTT",1,28.04,11,0.17,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAGTCCTTACTCA",1,16.79,10.99,0.15,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAAGTTACTTAACT",1,17.23,7.37,-3.46,0.27,1.5,1.07,0.03,">1 nonsynonymous","C61L S113H S129E N151S",4
"lib2","SARS-CoV-2","TATAAGTTCCCAAGAA",1,6.11,6.12,-4.72,2,3,1.08,0,">1 nonsynonymous","C61S R73S I88C Y123S",4
"lib2","SARS-CoV-2","TATAAGTTCCTACTAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F Y91I V181S",3
"lib2","SARS-CoV-2","TATAAGTTCTCAACTC",7,18.08,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","T15E G83C C102D F126T G146A C158V",6
"lib2","SARS-CoV-2","TATAAGTTGCCCTGAT",1,83.9,8.94,-1.9,0.09,1.88,1.1,0,">1 nonsynonymous","D34H N120V E141C V153E",4
"lib2","SARS-CoV-2","TATAATAAATAAATAA",12,7.52,6.29,-4.54,1.04,3,1.23,0,">1 nonsynonymous","C6R W23L D34T K128F",4
"lib2","SARS-CoV-2","TATAATAACAGGATGT",1,11.98,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F44L Y50F Y91V G146Q E154M",5
"lib2","SARS-CoV-2","TATAATAAGGTAACAA",11,193.79,9.63,-1.21,0.07,2.38,1.08,0,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","TATAATAAGTAAGAAG",10,107.31,6,-4.84,1.09,1.5,1.17,0.01,">1 nonsynonymous","P149T G155Y N171R",3
"lib2","SARS-CoV-2","TATAATAATACTTGGG",2,43.56,10.9,0.06,0.05,2.96,1.04,0,"1 nonsynonymous","G9A",1
"lib2","SARS-CoV-2","TATAATAATAGTCATC",1,9.91,10.09,-0.75,0.25,2.28,1.02,0.02,"1 nonsynonymous","V11H",1
"lib2","SARS-CoV-2","TATAATAATTTAGGGA",7,50.93,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Y39G D90M V103C Y178R",4
"lib2","SARS-CoV-2","TATAATACAAATGTCA",3,30.61,NA,NA,NA,NA,NA,NA,"stop","P82* D98I",2
"lib2","SARS-CoV-2","TATAATACCATACAAT",7,21.72,9.62,-1.21,0.33,1.5,1.07,0.07,">1 nonsynonymous","T63H S139L G155C",3
"lib2","SARS-CoV-2","TATAATACCGTAACAT",1,4.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V F70P T100I D137L G155N",5
"lib2","SARS-CoV-2","TATAATACCTATTAGG",8,87.55,10.17,-0.67,0.05,2.95,1.01,0,"1 nonsynonymous","Y143M",1
"lib2","SARS-CoV-2","TATAATACTATTTTTA",8,45.07,6.8,-4.04,0.21,1.61,1.18,0.01,">1 nonsynonymous","W23R S45D A190C K199Q",4
"lib2","SARS-CoV-2","TATAATAGACGAAAAC",3,29.09,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","Y50M G86A Y93R K128R",4
"lib2","SARS-CoV-2","TATAATAGATCAACTG",12,110.35,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5Y V77D",2
"lib2","SARS-CoV-2","TATAATAGTAAATAAA",6,82.81,8.29,-2.55,0.12,2.2,1.04,0.01,">1 nonsynonymous","A67S G166Y P197A",3
"lib2","SARS-CoV-2","TATAATAGTAAGACTT",10,304.27,8.49,-2.35,0.08,1.83,1.11,0,">1 nonsynonymous","L5T K56A G83L Q176R S200A",5
"lib2","SARS-CoV-2","TATAATAGTATGACCT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* A42C V103G V115E T140V L187K",6
"lib2","SARS-CoV-2","TATAATATAAACCTCT",3,15.18,10.16,-0.68,0.11,2.77,1.13,0.01,">1 nonsynonymous","D98E G152Y V153I",3
"lib2","SARS-CoV-2","TATAATATAAAGAAAG",3,12.1,6.28,-4.56,2,3,1.02,0,">1 nonsynonymous","S69P P82R W106T",3
"lib2","SARS-CoV-2","TATAATATACAAGCCA",7,69.81,10.2,-0.63,0.06,2.84,1.05,0,">1 nonsynonymous","V37M S45V",2
"lib2","SARS-CoV-2","TATAATATAGCACGGT",7,40.36,8.71,-2.13,0.16,2.8,1.23,0.01,">1 nonsynonymous","Y119F L125A N130A",3
"lib2","SARS-CoV-2","TATAATATCATCCGTG",7,28.47,6.15,-4.68,0.38,2.81,1.16,0,">1 nonsynonymous","A18E Y50H W106S G172C",4
"lib2","SARS-CoV-2","TATAATATCCTTATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* A42G A105R G174F R179Y",5
"lib2","SARS-CoV-2","TATAATATGATAGGGG",2,28.69,10.81,-0.03,0.07,2.92,1.1,0,"1 nonsynonymous","T193N",1
"lib2","SARS-CoV-2","TATAATATTTACACTT",3,2.42,NA,NA,NA,NA,NA,NA,"stop","L5E W23L L38* K87M A145G",5
"lib2","SARS-CoV-2","TATAATATTTAGGGAA",10,8.07,NA,NA,NA,NA,NA,NA,"stop","P7M F12K Y50* K94M",4
"lib2","SARS-CoV-2","TATAATATTTATAATT",2,13.06,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","I28K I88F K128P Q163L C195A T201M",6
"lib2","SARS-CoV-2","TATAATATTTCCGTAA",3,29.66,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I2H S113I N118V",3
"lib2","SARS-CoV-2","TATAATATTTGCAATC",4,13.55,NA,NA,NA,NA,NA,NA,"stop","F12N V77*",2
"lib2","SARS-CoV-2","TATAATCAAACCTTAT",7,45.82,9,-1.84,0.34,1.64,1.22,0.04,">1 nonsynonymous","N1V A14R K87T Y143L R179K",5
"lib2","SARS-CoV-2","TATAATCAACAAACTC",4,70.69,9.76,-1.08,0.1,2.41,1.06,0,">1 nonsynonymous","S41H L162C",2
"lib2","SARS-CoV-2","TATAATCAAGATATAT",6,50.13,10.02,-0.82,0.09,2.16,1.06,0,">1 nonsynonymous","A42L W106R",2
"lib2","SARS-CoV-2","TATAATCAAGCACATC",5,91.87,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F44I L60T S113Q G172R",4
"lib2","SARS-CoV-2","TATAATCAATCCAGAG",6,30.3,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","N4K G101S G116L N151K",4
"lib2","SARS-CoV-2","TATAATCATTACCTTT",1,14.6,9.75,-1.09,0.06,2.81,1.12,0,">1 nonsynonymous","G83C F134C",2
"lib2","SARS-CoV-2","TATAATCCAACACACT",2,0.16,NA,NA,NA,NA,NA,NA,"stop","G9* T15I F99R Y119F E141D",5
"lib2","SARS-CoV-2","TATAATCCGCCCCAAA",11,138.39,6.86,-3.98,0.29,1.5,1.15,0.01,">1 nonsynonymous","W23L A33L F62Y V173H",4
"lib2","SARS-CoV-2","TATAATCCGTATAAAT",5,79.84,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88K S113E L162K",3
"lib2","SARS-CoV-2","TATAATCCTATGCCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","S45P T55A Q84* W106S S139T Q168H",6
"lib2","SARS-CoV-2","TATAATCGAGAGTGCT",3,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T140V T148F G152P",4
"lib2","SARS-CoV-2","TATAATCGCTGGCTAT",2,44.19,6,-4.84,2,1.5,1.14,0.03,"1 nonsynonymous","Y178P",1
"lib2","SARS-CoV-2","TATAATCTAAAACCCA",9,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y W106T L131R",3
"lib2","SARS-CoV-2","TATAATCTGATTCTAA",2,12.76,6.68,-4.16,0.64,1.5,1.22,0.07,">1 nonsynonymous","G86N P161L R179S",3
"lib2","SARS-CoV-2","TATAATCTGCAGCGAA",4,86.8,10.73,-0.1,0.05,2.95,1.06,0,">1 nonsynonymous","K114L L122V",2
"lib2","SARS-CoV-2","TATAATCTTACCCTGA",6,83.62,10.77,-0.06,0.06,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAATGAAGATTGCT",15,183.65,10.92,0.09,0.05,2.95,1.06,0,"1 nonsynonymous","G9H",1
"lib2","SARS-CoV-2","TATAATGATATTAACA",1,38.67,10.83,0,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAATGCCCAGTACC",5,62.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S129F P149L P161H",3
"lib2","SARS-CoV-2","TATAATGCGAACACTA",3,49.3,6.11,-4.73,1.15,1.5,1.22,0.03,">1 nonsynonymous","G9V D90Y R127S Q163N",4
"lib2","SARS-CoV-2","TATAATGCTCATTGAA",7,64.86,10.81,-0.03,0.04,2.99,1.01,0,"1 nonsynonymous","A42W",1
"lib2","SARS-CoV-2","TATAATGGAAAGATCT",1,34.34,9.06,-1.78,0.18,2,1.21,0.02,">1 nonsynonymous","N24T F47M Y121P",3
"lib2","SARS-CoV-2","TATAATGGAGAAATAA",1,15.87,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","F44V N107A F126E P161S",4
"lib2","SARS-CoV-2","TATAATGGTAAGCCAG",3,38.69,10.36,-0.48,0.14,2.7,1.01,0.01,">1 nonsynonymous","N13D P149H",2
"lib2","SARS-CoV-2","TATAATGTCTGGACGG",3,1.41,NA,NA,NA,NA,NA,NA,"stop","F17L V103G Y119L P149R P161*",5
"lib2","SARS-CoV-2","TATAATGTTACAAATC",1,32.24,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","N4W G51I W106R G152F",4
"lib2","SARS-CoV-2","TATAATGTTCGCCTGG",4,12.22,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S45L L183S",2
"lib2","SARS-CoV-2","TATAATGTTTACAAAG",4,36.57,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","TATAATTAAAATCGTA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","C61F W106*",2
"lib2","SARS-CoV-2","TATAATTAATTTTGGG",4,30.89,7.53,-3.31,0.32,1.5,1.18,0.03,">1 nonsynonymous","S19W C61V",2
"lib2","SARS-CoV-2","TATAATTAGATAATAC",1,5.7,6.1,-4.73,2,3,1.25,0.02,">1 nonsynonymous","Y21S D112E R179T",3
"lib2","SARS-CoV-2","TATAATTAGTAAAAAA",4,85.42,9.56,-1.28,0.11,2.36,1.05,0,">1 nonsynonymous","I138R G155C",2
"lib2","SARS-CoV-2","TATAATTATCTTGACC",2,13.41,8.89,-1.95,0.36,2.1,1.04,0.04,">1 nonsynonymous","G86L C195N",2
"lib2","SARS-CoV-2","TATAATTATTAAAAAG",3,0.05,NA,NA,NA,NA,NA,NA,"stop","C6* K87N",2
"lib2","SARS-CoV-2","TATAATTCAACTCTAG",5,53.7,10.88,0.04,0.08,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAATTCACAAGCGC",5,96.41,7.89,-2.94,0.22,1.5,1.07,0.02,">1 nonsynonymous","C31L D90V",2
"lib2","SARS-CoV-2","TATAATTCATACAGTA",8,220.72,7.4,-3.43,0.09,2.21,1.11,0,"1 nonsynonymous","C158E",1
"lib2","SARS-CoV-2","TATAATTCCGAGGCAG",4,26.15,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N1K Q84K A89L Y119A",4
"lib2","SARS-CoV-2","TATAATTCGATGTACA",9,53.25,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T15P S45L G51S Y66F K128V",5
"lib2","SARS-CoV-2","TATAATTCGGTTGTTA",2,22.06,10.59,-0.24,0.08,2.92,1,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","TATAATTGAAGACCTA",1,34.3,10.75,-0.08,0.04,3,1.01,0,">1 nonsynonymous","N1Q R136K",2
"lib2","SARS-CoV-2","TATAATTTCGCAACCT",2,17.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92R G117K Q168T",3
"lib2","SARS-CoV-2","TATAATTTGCCAAAAA",2,27.03,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","Y91V A105S Y119S Y178T",4
"lib2","SARS-CoV-2","TATAATTTGTTCCGAG",1,5.43,10.78,-0.06,0.08,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAATTTTACAAATA",5,48.86,6,-4.84,2,3,1.19,0,">1 nonsynonymous","A18M L162E",2
"lib2","SARS-CoV-2","TATACAAAGTTTACAG",2,24.16,10.42,-0.41,0.06,2.91,1.07,0,">1 nonsynonymous","K26T L131M P149H",3
"lib2","SARS-CoV-2","TATACAAATATCAAAA",4,68.86,10.35,-0.48,0.03,2.94,1.03,0,">1 nonsynonymous","N107P S200T",2
"lib2","SARS-CoV-2","TATACAAATCAGCGAT",6,161.68,7.19,-3.65,0.12,1.87,1.11,0,">1 nonsynonymous","G146A G152S Y159Q",3
"lib2","SARS-CoV-2","TATACAACAACGCGGC",5,97.34,9.39,-1.44,0.08,2.24,1.03,0,">1 nonsynonymous","C6W D34V",2
"lib2","SARS-CoV-2","TATACAACACATACCC",8,190.46,10.64,-0.19,0.03,2.93,1.05,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","TATACAACAGCATTCA",3,22.23,10.33,-0.51,0.11,2.63,1.13,0.01,">1 nonsynonymous","N64P D98L",2
"lib2","SARS-CoV-2","TATACAACCTAATAGG",6,106.02,10.78,-0.06,0.04,2.95,1.04,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","TATACAAGGAATGAGA",3,1.35,NA,NA,NA,NA,NA,NA,"stop","A89N Y165* P169N",3
"lib2","SARS-CoV-2","TATACAAGGATACTAG",1,8.23,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","S53W I104W F134S I142G",4
"lib2","SARS-CoV-2","TATACAAGTCATATGT",10,2.81,NA,NA,NA,NA,NA,NA,"stop","L57G S129* Y165S Q176I",4
"lib2","SARS-CoV-2","TATACAAGTTATATTT",13,95.67,10.65,-0.19,0.07,2.89,1.11,0,"1 nonsynonymous","N130F",1
"lib2","SARS-CoV-2","TATACAATAGGCATAC",1,33.67,10.81,-0.02,0.08,2.74,1.25,0,"1 nonsynonymous","L122F",1
"lib2","SARS-CoV-2","TATACAATATCAAGAA",11,123.73,10.89,0.05,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACAATATTAACTT",1,11.27,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","A22L K94V N120Y E141D L162P",5
"lib2","SARS-CoV-2","TATACAATCATTTCAA",5,0.07,NA,NA,NA,NA,NA,NA,"stop","K56* A67C F126A P169A",4
"lib2","SARS-CoV-2","TATACAATCCGCTGAC",1,34.84,10.81,-0.03,0.09,2.86,1.13,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","TATACAATTACGTCCT",5,5.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3N V103H F160L",3
"lib2","SARS-CoV-2","TATACACAAAGCGGTA",3,116.62,10.85,0.01,0.05,2.93,1.08,0,">1 nonsynonymous","D98E K128E",2
"lib2","SARS-CoV-2","TATACACACATAACGC",6,21.73,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L60P I72Q P161H",3
"lib2","SARS-CoV-2","TATACACACCAGACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","TATACACACCGGTGCT",5,19.9,6,-4.84,0.64,3,1.05,0,">1 nonsynonymous","Y50C D97K L122P E141C",4
"lib2","SARS-CoV-2","TATACACACGGGCTAG",1,2.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61M D90W N120A N157C",4
"lib2","SARS-CoV-2","TATACACAGTCTCAGT",11,120.44,8.63,-2.21,0.08,2.26,1.11,0,"1 nonsynonymous","F167L",1
"lib2","SARS-CoV-2","TATACACATCTCGAAT",3,0.09,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36N",1
"lib2","SARS-CoV-2","TATACACATTTCAAAG",10,0.78,NA,NA,NA,NA,NA,NA,"stop","L57G S113* N120M I142A F160K V180G",6
"lib2","SARS-CoV-2","TATACACCAAAGAAAC",3,7.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67H K128V E141S",3
"lib2","SARS-CoV-2","TATACACCAATGGATT",1,0,NA,NA,NA,NA,NA,NA,"stop","F62* Y121P P149M K199I",4
"lib2","SARS-CoV-2","TATACACCCAGAAAGG",1,32.8,10.23,-0.61,0.12,2.59,1.01,0.01,">1 nonsynonymous","F8I F134L T140S",3
"lib2","SARS-CoV-2","TATACACGGCATTGTG",6,139.79,10.2,-0.64,0.03,2.9,1.02,0,">1 nonsynonymous","S45W C61N T100V",3
"lib2","SARS-CoV-2","TATACACGGTCATTAC",1,6.16,6.42,-4.41,2,3,1.15,0.01,">1 nonsynonymous","N24R L57V S69E K114T N120S K198G",6
"lib2","SARS-CoV-2","TATACACGTCAAATTG",3,14.11,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","F44T C61M G86R D98L Y119R F185Y",6
"lib2","SARS-CoV-2","TATACACTATACATTA",1,7.7,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y93K S129I V153G T201L",4
"lib2","SARS-CoV-2","TATACACTTAGGAATA",7,0.1,NA,NA,NA,NA,NA,NA,"stop","I28* D59W D90H G116W R136S",5
"lib2","SARS-CoV-2","TATACACTTGGTTCAA",3,31.14,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F17Q S69C G86R G116V",4
"lib2","SARS-CoV-2","TATACAGAATATGAAA",12,24.98,6.67,-4.17,0.34,1.88,1.2,0.03,">1 nonsynonymous","T3W A42G C49F D59Y D98P",5
"lib2","SARS-CoV-2","TATACAGACGCAGGCG",3,26.74,6,-4.84,1.99,1.5,1.06,0.01,">1 nonsynonymous","F44D Y93T",2
"lib2","SARS-CoV-2","TATACAGAGGTTTGCG",5,72.69,9.41,-1.43,0.14,1.61,1.1,0.01,">1 nonsynonymous","S45Y A81M P149L",3
"lib2","SARS-CoV-2","TATACAGAGTACAAAT",5,21.4,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","E10V Y50T N107R S113V",4
"lib2","SARS-CoV-2","TATACAGATATAAACT",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N A105F E154F G174H",4
"lib2","SARS-CoV-2","TATACAGATGACCTTT",11,275.48,10.33,-0.5,0.03,2.91,1.1,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TATACAGGATGATTAG",3,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Q Y123T Y175F",3
"lib2","SARS-CoV-2","TATACAGTAAATTATC",2,45.49,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","P7M D34K C61S A105K P161C",5
"lib2","SARS-CoV-2","TATACAGTAGACCAGG",7,89.32,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T46I G86L N120S K128S",4
"lib2","SARS-CoV-2","TATACATAATTGGTGA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103E",1
"lib2","SARS-CoV-2","TATACATAGCGTAATT",1,9.63,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","S29T A89F I104N",3
"lib2","SARS-CoV-2","TATACATAGGATAGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* F47* K94V",3
"lib2","SARS-CoV-2","TATACATAGGATTGGA",10,50.28,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","C49M T85M N107C H189P",4
"lib2","SARS-CoV-2","TATACATCATAGCCTA",2,17.07,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","Q84K F99K Y175M",3
"lib2","SARS-CoV-2","TATACATCCTGATGAA",7,96.91,9.68,-1.16,0.09,2.12,1.09,0,">1 nonsynonymous","S41G Y50F T100K Y123A",4
"lib2","SARS-CoV-2","TATACATCGTCTCAAA",1,15.22,10.07,-0.76,0.27,2.17,1,0.02,">1 nonsynonymous","I2R F17A N24A",3
"lib2","SARS-CoV-2","TATACATGTAATAACA",4,58.17,8.09,-2.75,0.24,1.5,1.06,0.02,">1 nonsynonymous","Y35E P177S",2
"lib2","SARS-CoV-2","TATACATTTAGCATTG",6,125.76,10.74,-0.1,0.04,2.91,1.08,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","TATACCAAGACTCCAT",1,14.19,6,-4.84,2,3,1.04,0,">1 nonsynonymous","R16E E141L Q176M L183Y",4
"lib2","SARS-CoV-2","TATACCAATTGGATAA",6,42.72,10.61,-0.23,0.04,2.88,1.07,0,">1 nonsynonymous","R27M D97S",2
"lib2","SARS-CoV-2","TATACCACCCCTTTCA",5,48.32,10.81,-0.03,0.06,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACCACCGTCGCGT",4,35.59,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","I80G Q84L D90S G152T L162S",5
"lib2","SARS-CoV-2","TATACCACTACAATCT",9,62.91,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","P54E Y91P D98L",3
"lib2","SARS-CoV-2","TATACCAGAAACGCAG",7,59.77,9.6,-1.24,0.07,2.31,1.01,0,">1 nonsynonymous","C6R S147L",2
"lib2","SARS-CoV-2","TATACCATACGCAACT",4,47.42,10.67,-0.17,0.06,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACCATATAAACAT",6,36.86,9.63,-1.2,0.14,2.18,1.05,0.01,">1 nonsynonymous","A42E P96E P149A",3
"lib2","SARS-CoV-2","TATACCATATCTAGCC",4,84.26,10.87,0.03,0.08,2.87,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACCATCCCCGTAT",5,48.52,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Y35Q S53Q T100K E141C P161G P177R",6
"lib2","SARS-CoV-2","TATACCATTAGACACT",6,46.75,6,-4.84,1.01,3,1.3,0.01,">1 nonsynonymous","T46L P82Y D97E A105T R127S P149S",6
"lib2","SARS-CoV-2","TATACCCAAAAAGGCG",8,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y R127L Q176S",3
"lib2","SARS-CoV-2","TATACCCAGCGGGTGA",6,78.16,10.79,-0.05,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TATACCCAGTGCGTAG",1,8.34,6,-4.84,2,1.5,1.34,0.06,">1 nonsynonymous","D34C A105Q S129D",3
"lib2","SARS-CoV-2","TATACCCATCTCAACG",9,403.57,10.17,-0.67,0.07,2.43,1.02,0,">1 nonsynonymous","P54Y T85W S139N",3
"lib2","SARS-CoV-2","TATACCCGAAAAACCG",6,98.01,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9N F70N",2
"lib2","SARS-CoV-2","TATACCCGTAGTGGTT",1,54.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y119G G172N",2
"lib2","SARS-CoV-2","TATACCCGTGACTCTC",2,60.19,10.65,-0.18,0.05,2.91,1.03,0,"1 nonsynonymous","N4F",1
"lib2","SARS-CoV-2","TATACCCTGGTCTAAT",5,66.73,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G9I A42V L95G",3
"lib2","SARS-CoV-2","TATACCGATATATAGT",1,18.23,7.15,-3.68,0.2,2.01,1.08,0.01,"1 nonsynonymous","Y175T",1
"lib2","SARS-CoV-2","TATACCGCACGTCATC",3,51.18,9.18,-1.66,0.06,2.4,1,0,">1 nonsynonymous","K87M P96R S147L",3
"lib2","SARS-CoV-2","TATACCGCCCAACATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61E V115M",2
"lib2","SARS-CoV-2","TATACCGCGACTAACT",11,2.9,NA,NA,NA,NA,NA,NA,"stop","G9E Y50C N120* R179F",4
"lib2","SARS-CoV-2","TATACCGCTACACACC",5,37.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T85L P96Q G174T",3
"lib2","SARS-CoV-2","TATACCGCTTAAAACG",3,44.36,10.69,-0.14,0.06,2.94,1.05,0,"1 nonsynonymous","V115I",1
"lib2","SARS-CoV-2","TATACCGCTTCTAAAT",8,3.35,NA,NA,NA,NA,NA,NA,"stop","Y121S P133*",2
"lib2","SARS-CoV-2","TATACCGGGCACTCTA",1,17.79,9.75,-1.09,0.1,2.34,1.13,0.01,">1 nonsynonymous","I104S G146S",2
"lib2","SARS-CoV-2","TATACCGTGCGCCGAC",4,71.71,8.16,-2.68,0.13,1.88,1.06,0.01,"1 nonsynonymous","S139P",1
"lib2","SARS-CoV-2","TATACCTCAATCCTGC",8,200.24,10.78,-0.05,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACCTCATTAATAT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","C61* G86W W106R",3
"lib2","SARS-CoV-2","TATACCTCGAATCAGA",2,6.26,7.26,-3.57,0.33,1.82,1.26,0.02,"1 nonsynonymous","W23K",1
"lib2","SARS-CoV-2","TATACCTCTGGCGAAG",4,66.38,6,-4.84,2,3,1.14,0,">1 nonsynonymous","P82N Y175Q H189T",3
"lib2","SARS-CoV-2","TATACCTGGGTACAGC",2,47.46,10.49,-0.35,0.05,2.98,1,0,">1 nonsynonymous","D59V T148S",2
"lib2","SARS-CoV-2","TATACCTTAACGAATT",9,74.68,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P7I S113Y Y119S K128F",4
"lib2","SARS-CoV-2","TATACCTTAAGAGGTA",2,87.33,10.67,-0.17,0.05,2.87,1.14,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","TATACCTTAATCCGCC",2,0.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S Q144S P197T",3
"lib2","SARS-CoV-2","TATACGAAAATATAAC",2,31.49,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G74R A89R Q176K",3
"lib2","SARS-CoV-2","TATACGAAAGAAATGC",4,1.09,NA,NA,NA,NA,NA,NA,"stop","S19* I88M T201G",3
"lib2","SARS-CoV-2","TATACGAAATCTCCTG",1,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134S V173I",2
"lib2","SARS-CoV-2","TATACGAACTATATTC",5,13.85,10.07,-0.77,0.08,2.64,1.08,0,">1 nonsynonymous","N24P H189N",2
"lib2","SARS-CoV-2","TATACGAAGTTTCAGG",8,54.7,6,-4.84,2,1.5,1.1,0,"1 nonsynonymous","F167C",1
"lib2","SARS-CoV-2","TATACGAATACTAACC",1,6.84,10.1,-0.74,0.07,3,1,0,">1 nonsynonymous","A22F Y50W T193I",3
"lib2","SARS-CoV-2","TATACGAATGGTAGGT",2,7.52,6.52,-4.32,0.96,3,1.08,0.03,">1 nonsynonymous","F12V S41D A67F D98I S129C Q168W Y175M",7
"lib2","SARS-CoV-2","TATACGACATAGAATT",3,40.45,9.72,-1.11,0.09,2.53,1.07,0,">1 nonsynonymous","R27L S139I",2
"lib2","SARS-CoV-2","TATACGACGCAGCAAC",1,16.2,11,0.16,0.06,3,1.02,0,">1 nonsynonymous","T3E V37I A190H",3
"lib2","SARS-CoV-2","TATACGAGCAAAAGGA",3,58.37,10.82,-0.02,0.05,2.96,1.05,0,">1 nonsynonymous","L60G Q168F",2
"lib2","SARS-CoV-2","TATACGAGTTGTCAAA",6,16.45,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","I88F K132I V153I",3
"lib2","SARS-CoV-2","TATACGATGACCTCGA",3,100.38,10.88,0.04,0.05,2.92,1.08,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","TATACGATTATGCCAA",12,179.93,10.58,-0.26,0.06,2.9,1.1,0,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","TATACGATTCGAATAT",8,156.36,10.69,-0.15,0.03,2.95,1.05,0,">1 nonsynonymous","K56M G152S",2
"lib2","SARS-CoV-2","TATACGCACCCCCTCA",2,48.85,10.84,0,0.06,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACGCCCCTGTGGC",3,1.84,NA,NA,NA,NA,NA,NA,"stop","T55* Q144I N157G",3
"lib2","SARS-CoV-2","TATACGCCTGAAGTCA",1,8.21,9.41,-1.43,0.29,1.5,1.05,0.04,">1 nonsynonymous","N13F R136A",2
"lib2","SARS-CoV-2","TATACGCGGATTTACG",3,69,10.21,-0.62,0.09,2.48,1.02,0,"1 nonsynonymous","V52K",1
"lib2","SARS-CoV-2","TATACGCGTAAACGTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63K R78P P96L Q168L",4
"lib2","SARS-CoV-2","TATACGCTAAGACCAA",15,109.08,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G86S V115I R136Q E141P L162K",5
"lib2","SARS-CoV-2","TATACGCTAATTTACC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33F D112R K132H",3
"lib2","SARS-CoV-2","TATACGCTTCCGCGAT",5,125.14,10.77,-0.07,0.04,2.93,1.1,0,">1 nonsynonymous","G9Y E141T V173I L188Y",4
"lib2","SARS-CoV-2","TATACGGAAAGAATCC",1,7.9,10.76,-0.08,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TATACGGACCTACACC",2,0,NA,NA,NA,NA,NA,NA,"stop","A105* N157R",2
"lib2","SARS-CoV-2","TATACGGAGTGAAATC",2,37.17,10.4,-0.44,0.09,2.87,1.1,0,">1 nonsynonymous","T100W I104L",2
"lib2","SARS-CoV-2","TATACGGCAGCGATTC",1,17.25,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","L125A E141I L183G",3
"lib2","SARS-CoV-2","TATACGGCCCCACTCC",4,64.19,7.96,-2.88,0.34,1.5,1.09,0.03,">1 nonsynonymous","N64M K94Y Y121L",3
"lib2","SARS-CoV-2","TATACGGGTGGACATC",4,146.27,10.18,-0.65,0.03,2.88,1.03,0,"1 nonsynonymous","Y121N",1
"lib2","SARS-CoV-2","TATACGGTCTACTCTA",7,16.17,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","L5A C49N V181Y",3
"lib2","SARS-CoV-2","TATACGTAAGTTTGCT",1,13.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A42V D90S V173I",3
"lib2","SARS-CoV-2","TATACGTCACGACGCC",3,50.18,8.1,-2.74,0.16,1.86,1.08,0.01,">1 nonsynonymous","S53H L60P Q163R G174V K198Y",5
"lib2","SARS-CoV-2","TATACGTCTACACAAC",11,79.26,10.82,-0.01,0.05,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACGTGGACAATGG",6,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V Y66R G83D",3
"lib2","SARS-CoV-2","TATACGTGGTGAGATC",4,50.52,10.32,-0.52,0.07,2.96,1,0,">1 nonsynonymous","F44L E141V",2
"lib2","SARS-CoV-2","TATACGTTCGGCAATC",1,14.27,10.7,-0.14,0.12,2.63,1.32,0.01,">1 nonsynonymous","G9Q S41L",2
"lib2","SARS-CoV-2","TATACTAAAGATGGAG",2,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y I104K V180I",3
"lib2","SARS-CoV-2","TATACTAAATCTGATA",2,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L A105E G117P Q168G",4
"lib2","SARS-CoV-2","TATACTAAGATTCCAA",8,46.25,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C49V A81T V103Y F126L K198S",5
"lib2","SARS-CoV-2","TATACTAAGTATAAAT",1,35.36,9.13,-1.71,0.09,2.42,1.09,0.01,">1 nonsynonymous","I2M I28S G174M",3
"lib2","SARS-CoV-2","TATACTACAAAATAAA",13,112.15,10.5,-0.34,0.03,2.91,1.09,0,"1 nonsynonymous","G152C",1
"lib2","SARS-CoV-2","TATACTACGCTGGCTG",2,10.39,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1T A105L R127T E135P E154V H189Y",6
"lib2","SARS-CoV-2","TATACTAGAATTTAGT",1,32.49,10.96,0.12,0.08,3,1.02,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","TATACTAGCAGTGACT",1,6.81,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","C61V D68Y K94I",3
"lib2","SARS-CoV-2","TATACTAGGGTTAAGG",14,175.32,9.72,-1.11,0.08,2.33,1.06,0,">1 nonsynonymous","N40I G116T",2
"lib2","SARS-CoV-2","TATACTATAAAACCAT",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y F8C V37D T46N D68M D98W F134L",7
"lib2","SARS-CoV-2","TATACTATAACAATAG",10,104.96,10.37,-0.46,0.04,2.9,1.05,0,"1 nonsynonymous","N107C",1
"lib2","SARS-CoV-2","TATACTATAGACAACG",6,222.19,8.78,-2.06,0.06,2.72,1.11,0,">1 nonsynonymous","N58R A105T Y119F",3
"lib2","SARS-CoV-2","TATACTATCAAATCGG",4,0.34,NA,NA,NA,NA,NA,NA,"stop","C49* N120V L125* F167S V180Y",5
"lib2","SARS-CoV-2","TATACTATCCTGGTTA",8,4.68,NA,NA,NA,NA,NA,NA,"stop","Y39S G101D A105I G116Q E141S F167* P197I",7
"lib2","SARS-CoV-2","TATACTATGCACGCGT",13,67.73,6,-4.84,2,3,1.24,0,">1 nonsynonymous","G9P S43T C49Y A105I K114M",5
"lib2","SARS-CoV-2","TATACTATTCATGTTA",8,101.54,6,-4.84,1.09,1.5,1.23,0.01,">1 nonsynonymous","V103S C158G G166S",3
"lib2","SARS-CoV-2","TATACTATTTAAACTG",2,11.42,9.78,-1.06,0.11,2.28,1.02,0,"1 nonsynonymous","F185P",1
"lib2","SARS-CoV-2","TATACTCAGTATGTTG",1,2.02,NA,NA,NA,NA,NA,NA,"stop","G74V S147T N157L Y175*",4
"lib2","SARS-CoV-2","TATACTCCAAACCGCT",2,41.01,10.72,-0.12,0.05,2.97,1.07,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","TATACTCGATAGAAAA",5,20.7,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","G74R",1
"lib2","SARS-CoV-2","TATACTCGGGAATGCG",8,80.24,10.85,0.02,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TATACTCGTGATAATA",5,29.03,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F8W W106E G155I",3
"lib2","SARS-CoV-2","TATACTCTCAAGTAAA",6,59.15,8.8,-2.04,0.09,2.03,1.1,0,">1 nonsynonymous","I2Y N24S C61E Q84N P133W",5
"lib2","SARS-CoV-2","TATACTCTCCCACCAC",3,0.11,NA,NA,NA,NA,NA,NA,"stop","V103G A145* E154N L162R K199S",5
"lib2","SARS-CoV-2","TATACTCTGTATGCTC",10,183.9,10.82,-0.01,0.06,2.95,1.07,0,"1 nonsynonymous","S29R",1
"lib2","SARS-CoV-2","TATACTGAATGCCTCC",3,56.02,10.04,-0.79,0.08,2.29,1.11,0,">1 nonsynonymous","L60A D90G",2
"lib2","SARS-CoV-2","TATACTGACAAAGATA",4,68.43,10.83,0,0.05,3,1,0,"1 nonsynonymous","S147L",1
"lib2","SARS-CoV-2","TATACTGACTATTAAA",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20S P96F E141K G174E",4
"lib2","SARS-CoV-2","TATACTGCCCTACATT",9,141.43,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R127S C158V",2
"lib2","SARS-CoV-2","TATACTGGGGTACTCT",1,7.4,10.38,-0.46,0.14,2.64,1.38,0.01,">1 nonsynonymous","T55H E141G",2
"lib2","SARS-CoV-2","TATACTGTAGAAGAAC",9,143.04,6.04,-4.79,0.72,1.5,1.17,0.01,">1 nonsynonymous","P96D Y123E G152I",3
"lib2","SARS-CoV-2","TATACTGTGTCATGGG",2,57.43,9.42,-1.41,0.11,2.51,1.07,0,">1 nonsynonymous","T55F N107E K128T",3
"lib2","SARS-CoV-2","TATACTTGAATATGTT",6,6.27,NA,NA,NA,NA,NA,NA,"stop","T55* N64Y S113G",3
"lib2","SARS-CoV-2","TATACTTGCGGTAGGC",5,2.85,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","TATACTTGTTCTATAA",6,101.1,6,-4.84,1.33,1.5,1.19,0.02,">1 nonsynonymous","Y21E S129D F167Y",3
"lib2","SARS-CoV-2","TATAGAAAAACGAGGG",8,68.35,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D90M F99N I104H Y178S",4
"lib2","SARS-CoV-2","TATAGAAAACAATAAA",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R N40T P54H",3
"lib2","SARS-CoV-2","TATAGAAAAGCCTGCA",12,3.57,NA,NA,NA,NA,NA,NA,"stop","C49* Y91S",2
"lib2","SARS-CoV-2","TATAGAAAAGTGCCAA",4,2.05,NA,NA,NA,NA,NA,NA,"stop","K48M Y119*",2
"lib2","SARS-CoV-2","TATAGAAACAAGAAAA",2,37.53,10.12,-0.71,0.05,2.93,1.02,0,"1 nonsynonymous","C6W",1
"lib2","SARS-CoV-2","TATAGAAAGGTACTTA",6,72.85,10.79,-0.05,0.05,2.86,1.16,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","TATAGAAATGAAACAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","G86Y F99L S113* L122N T170Y",5
"lib2","SARS-CoV-2","TATAGAAATGTTACCA",15,87.67,9.13,-1.7,0.09,2.29,1.11,0,">1 nonsynonymous","Y21S K87S",2
"lib2","SARS-CoV-2","TATAGAACAGCTGTCT",3,6.93,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","P82K E135M",2
"lib2","SARS-CoV-2","TATAGAACGAACTACA",2,40.21,10.71,-0.13,0.06,2.88,1.12,0,">1 nonsynonymous","T3K E154S V173M",3
"lib2","SARS-CoV-2","TATAGAAGCATTGAGT",1,45.55,9.99,-0.85,0.05,2.25,1,0,">1 nonsynonymous","L5P N13I",2
"lib2","SARS-CoV-2","TATAGAAGCCAGCCTA",2,8.15,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","T55F V103R C158S",3
"lib2","SARS-CoV-2","TATAGAAGCCGCGCCA",2,37.58,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C158P K199Y",2
"lib2","SARS-CoV-2","TATAGAATAAATACTA",5,67.19,10.76,-0.08,0.05,2.96,1.07,0,"1 nonsynonymous","V37D",1
"lib2","SARS-CoV-2","TATAGAATAACAAACT",3,50.07,8.08,-2.76,0.13,2.14,1.06,0.01,">1 nonsynonymous","Q84N L122M N157L P191T",4
"lib2","SARS-CoV-2","TATAGAATATCCTCAT",1,17.33,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","C49T G86E N120T",3
"lib2","SARS-CoV-2","TATAGAATCCGTACTA",8,93.31,8.59,-2.25,0.21,1.5,1.03,0.02,">1 nonsynonymous","E76T P149N S184M",3
"lib2","SARS-CoV-2","TATAGAATGGGATTAT",10,276.82,9.45,-1.39,0.07,2.86,1.06,0,">1 nonsynonymous","I2Y D59P Y159H",3
"lib2","SARS-CoV-2","TATAGAATTAACCAAC",8,144.49,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","E10F N92L G117K G152V",4
"lib2","SARS-CoV-2","TATAGAATTCACCATC",5,0.24,NA,NA,NA,NA,NA,NA,"stop","D97L D112* T201P",3
"lib2","SARS-CoV-2","TATAGACAAGCCCCAT",2,120.95,10.88,0.05,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAGACCGAAAAATC",8,0.63,NA,NA,NA,NA,NA,NA,"stop","F62* N92L V173P T201S",4
"lib2","SARS-CoV-2","TATAGACCGACTAAAC",6,44.51,6.51,-4.33,0.67,1.5,1.2,0.03,">1 nonsynonymous","C6S V77A",2
"lib2","SARS-CoV-2","TATAGACCGATAACAA",1,14.97,10.17,-0.67,0.14,2.79,1.19,0.01,">1 nonsynonymous","T63N Q163E",2
"lib2","SARS-CoV-2","TATAGACCTTACTGAA",4,6.39,6,-4.84,2,3,1,0,">1 nonsynonymous","A14L S41W Y66R N157A",4
"lib2","SARS-CoV-2","TATAGACGACCGTTTT",9,61.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91N R127L I138V",3
"lib2","SARS-CoV-2","TATAGACGTACAAAAA",1,2.18,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5F",1
"lib2","SARS-CoV-2","TATAGACTGCAGTACC",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATAGACTGTACTTGG",3,56.68,9.49,-1.35,0.1,1.85,1.11,0,"1 nonsynonymous","A89F",1
"lib2","SARS-CoV-2","TATAGAGACGCCGCCT",4,15.52,7.29,-3.55,0.37,1.5,1.17,0.06,">1 nonsynonymous","F99H G152C",2
"lib2","SARS-CoV-2","TATAGAGACTGAAATG",3,131.41,10.9,0.07,0.04,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TATAGAGAGATAATAA",4,14.67,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N30E C49S L183F",3
"lib2","SARS-CoV-2","TATAGAGCCTAAAGCG",14,113.92,6.01,-4.83,1.21,1.5,1.26,0.02,">1 nonsynonymous","C6S F17K D97M S129G",4
"lib2","SARS-CoV-2","TATAGAGCTAAAATAA",5,115.21,10.31,-0.52,0.03,2.84,1.05,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TATAGAGTAAATTATT",6,18.8,6,-4.84,2,1.5,1.37,0.03,">1 nonsynonymous","T55V Q84Y I104N",3
"lib2","SARS-CoV-2","TATAGAGTGCTATATT",2,26.58,8.24,-2.6,0.29,1.5,1.27,0.04,">1 nonsynonymous","S29F F44R R136V",3
"lib2","SARS-CoV-2","TATAGATAAAGCACCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F F99V",2
"lib2","SARS-CoV-2","TATAGATAACACTGAA",6,61.48,10.6,-0.23,0.05,2.93,1.06,0,">1 nonsynonymous","T3P T85Y",2
"lib2","SARS-CoV-2","TATAGATAACTTCTGA",5,1.98,NA,NA,NA,NA,NA,NA,"stop","C61T G83N V173*",3
"lib2","SARS-CoV-2","TATAGATACTATAAAG",1,16.44,7.22,-3.61,0.28,1.5,1.03,0.04,">1 nonsynonymous","T3G R73V G174V",3
"lib2","SARS-CoV-2","TATAGATATAAAAACG",5,58.92,9.63,-1.2,0.05,2.83,1.04,0,">1 nonsynonymous","Y35P N118Q",2
"lib2","SARS-CoV-2","TATAGATATACAGTAA",19,89.36,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","T3P D68K",2
"lib2","SARS-CoV-2","TATAGATCAAACAGTA",13,163.38,8.27,-2.56,0.14,1.75,1.14,0.01,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","TATAGATGAAATCAAT",7,65.78,10.43,-0.41,0.03,2.88,1.11,0,">1 nonsynonymous","N1V Y35V D59T P149L",4
"lib2","SARS-CoV-2","TATAGATGAATTAAAT",6,82.08,9.27,-1.57,0.05,2.87,1.08,0,"1 nonsynonymous","N118I",1
"lib2","SARS-CoV-2","TATAGATTAATCAAGT",11,176.63,10.31,-0.53,0.04,2.88,1.03,0,">1 nonsynonymous","E10L L60F",2
"lib2","SARS-CoV-2","TATAGATTTATAATGG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* L60V T100P I104M V182A",5
"lib2","SARS-CoV-2","TATAGATTTCTAAATT",1,61.62,10.89,0.05,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAGCAACAAGCCAA",4,30.69,10.06,-0.77,0.09,2.78,1.04,0,">1 nonsynonymous","N58F F160I",2
"lib2","SARS-CoV-2","TATAGCACAAACGGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45R T55Y P177Q",3
"lib2","SARS-CoV-2","TATAGCACAAGTAAAG",3,19.75,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","T100H C150V F167Q",3
"lib2","SARS-CoV-2","TATAGCACATAATTAA",10,90.56,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S41P G101F",2
"lib2","SARS-CoV-2","TATAGCACATGTAAAA",7,34.65,6.21,-4.63,0.83,1.5,1.2,0.03,">1 nonsynonymous","V71K D112Y N120T F160N T201H",5
"lib2","SARS-CoV-2","TATAGCACGTCCCTAA",7,55.53,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","A22F N130L D137Y T201M",4
"lib2","SARS-CoV-2","TATAGCAGAATTAAGA",1,8.38,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","V20T I80P G155D",3
"lib2","SARS-CoV-2","TATAGCAGCCAAAGAA",6,20.09,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S53F Y121G G146W L183G",4
"lib2","SARS-CoV-2","TATAGCAGGACCACTA",6,44.65,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G86M I138R C158S",3
"lib2","SARS-CoV-2","TATAGCATAAACAGTT",7,240.56,10.65,-0.19,0.02,2.98,1.02,0,">1 nonsynonymous","N4R L57M",2
"lib2","SARS-CoV-2","TATAGCATTAATGTAA",2,24.26,9.84,-0.99,0.11,3,1.06,0.01,">1 nonsynonymous","N58D R73S",2
"lib2","SARS-CoV-2","TATAGCCAAAGGATTA",12,4.06,NA,NA,NA,NA,NA,NA,"stop","T15C N40I Y50* F62R R73P R127S D137Q",7
"lib2","SARS-CoV-2","TATAGCCAATTCTTTT",9,105.55,10.14,-0.7,0.07,2.18,1.03,0,">1 nonsynonymous","P96L L122R",2
"lib2","SARS-CoV-2","TATAGCCACAAAGGAT",6,72.79,10.4,-0.43,0.06,2.79,1.04,0,"1 nonsynonymous","Y165F",1
"lib2","SARS-CoV-2","TATAGCCATTAGTATA",1,46.13,8.16,-2.68,0.29,1.56,1.12,0.03,">1 nonsynonymous","Y119L S139I",2
"lib2","SARS-CoV-2","TATAGCCCACATCTAG",1,25.03,9.12,-1.72,0.1,2.96,1.08,0,">1 nonsynonymous","D98A F126Y S184H",3
"lib2","SARS-CoV-2","TATAGCCCAGTCGCAC",5,98.61,10.64,-0.19,0.05,2.87,1.07,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","TATAGCCCGAACATAT",2,0.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62K E141W N157S V180A",4
"lib2","SARS-CoV-2","TATAGCCCTACCCAAA",6,80.9,9.65,-1.19,0.06,2.04,1.06,0,"1 nonsynonymous","T46P",1
"lib2","SARS-CoV-2","TATAGCCCTGAGTCAA",8,51.64,6.12,-4.72,0.58,1.5,1.16,0.01,">1 nonsynonymous","L60I L95Q C158R",3
"lib2","SARS-CoV-2","TATAGCCCTTAAATTT",3,36.47,6.74,-4.09,0.36,1.5,1.19,0.03,">1 nonsynonymous","D59M E135R P149W",3
"lib2","SARS-CoV-2","TATAGCCGAAGACAAT",5,38.46,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","K94G G172W V180C K198D",4
"lib2","SARS-CoV-2","TATAGCCTTTAATACC",5,33.17,9.08,-1.75,0.21,1.5,1.01,0.02,">1 nonsynonymous","F44N N58R W106S",3
"lib2","SARS-CoV-2","TATAGCGAAGGGTGGT",4,38.01,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N110T G172R",2
"lib2","SARS-CoV-2","TATAGCGCTAACACCG",3,60.71,10.72,-0.11,0.06,2.86,1.15,0,">1 nonsynonymous","Y39R P149T",2
"lib2","SARS-CoV-2","TATAGCGGAGGGCCAT",4,52.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S43F K56R R124C A190I",4
"lib2","SARS-CoV-2","TATAGCTTGCTCATAA",4,106.11,10.7,-0.13,0.06,2.88,1.14,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","TATAGGAAAATTGATG",1,9.68,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","Y35P R127F V173A",3
"lib2","SARS-CoV-2","TATAGGAAATTATATT",2,8.23,8.88,-1.96,0.38,1.5,1.14,0.05,">1 nonsynonymous","G9P K56W D98V K199V",4
"lib2","SARS-CoV-2","TATAGGAACCATTGCA",7,49.83,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y35R V71R E141V N157M T201C",5
"lib2","SARS-CoV-2","TATAGGAACTAACCGA",4,10.35,NA,NA,NA,NA,NA,NA,"stop","V37R R136*",2
"lib2","SARS-CoV-2","TATAGGAATGTTTACA",11,148.53,10.3,-0.54,0.02,2.91,1.03,0,">1 nonsynonymous","V32D N64L",2
"lib2","SARS-CoV-2","TATAGGAATTCAATCG",4,45.88,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F44T S69E N92V N107Y L162W",5
"lib2","SARS-CoV-2","TATAGGAATTCATACA",11,2.57,NA,NA,NA,NA,NA,NA,"stop","Y35* Y66M",2
"lib2","SARS-CoV-2","TATAGGACAATAAAAA",1,0.13,NA,NA,NA,NA,NA,NA,"stop","Y91* A105M R136G F160V Q176L",5
"lib2","SARS-CoV-2","TATAGGACATAACTAC",1,2.7,NA,NA,NA,NA,NA,NA,"stop","E76* P96T T100G",3
"lib2","SARS-CoV-2","TATAGGACGCCTATTA",2,2.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K G146I",2
"lib2","SARS-CoV-2","TATAGGAGGCAATAAT",1,18.74,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y39W I104K Y121S P149S",4
"lib2","SARS-CoV-2","TATAGGAGGCTTGGAG",12,244.8,10.88,0.04,0.05,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TATAGGATAATGGAAA",11,24.59,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","S19E Y50H Y66F D97L V173R",5
"lib2","SARS-CoV-2","TATAGGCCGCTATAGA",11,56.62,9.37,-1.46,0.29,1.8,1.21,0.03,">1 nonsynonymous","T46K L183R",2
"lib2","SARS-CoV-2","TATAGGCCTGTAGCAA",3,133.37,8.25,-2.58,0.11,2.7,1.08,0,">1 nonsynonymous","I28F C158R T201E",3
"lib2","SARS-CoV-2","TATAGGCGTTAAATGC",3,26.32,10.49,-0.35,0.05,2.95,1.02,0,">1 nonsynonymous","R16L V65A T201P",3
"lib2","SARS-CoV-2","TATAGGCTGGTGCAAC",1,15.41,11.22,0.39,0.09,2.92,1.05,0,">1 nonsynonymous","G9K S41N F62W L122A",4
"lib2","SARS-CoV-2","TATAGGGAAGAACTTA",2,27.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L57Q Q144L F167L",3
"lib2","SARS-CoV-2","TATAGGGACGCCTATA",4,67.21,10.22,-0.62,0.05,2.84,1.07,0,">1 nonsynonymous","D34S V115S",2
"lib2","SARS-CoV-2","TATAGGGGAGCCTTAA",4,40.84,8.39,-2.44,0.29,1.5,1.1,0.03,">1 nonsynonymous","Q79R D97A S164L",3
"lib2","SARS-CoV-2","TATAGGGTAATAGCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","R16S Y143C P161*",3
"lib2","SARS-CoV-2","TATAGGGTTACAGACT",3,28.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V11L I72S N107K P149N",4
"lib2","SARS-CoV-2","TATAGGTACAACTAGC",7,42.41,10.85,0.01,0.11,2.84,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAGGTAGACACCAT",10,70.86,10.24,-0.6,0.06,2.89,1.07,0,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","TATAGGTAGTTCTAAG",2,30.32,10.6,-0.24,0.07,2.93,1.05,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","TATAGGTCTCATCAAA",5,69.77,8.43,-2.41,0.11,2.87,1.07,0.01,">1 nonsynonymous","G9W N118S T170R",3
"lib2","SARS-CoV-2","TATAGGTTTGGGCTGA",12,199.5,8.67,-2.17,0.08,1.91,1.11,0,">1 nonsynonymous","K48C D90N Q176H",3
"lib2","SARS-CoV-2","TATAGTAAACACCCAT",3,5.82,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","G51T N107F L122V Q144L",4
"lib2","SARS-CoV-2","TATAGTACGAAAAATT",1,0.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F R73C",2
"lib2","SARS-CoV-2","TATAGTACGAAAGTAT",1,28.37,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23R L131F N151L P161S",4
"lib2","SARS-CoV-2","TATAGTACTCAGTGAT",4,105.35,10.81,-0.03,0.08,2.85,1.05,0,"1 nonsynonymous","F62P",1
"lib2","SARS-CoV-2","TATAGTAGCAACTTGC",7,106.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9I N64L R136K C150F",4
"lib2","SARS-CoV-2","TATAGTAGCACGAATG",2,0,NA,NA,NA,NA,NA,NA,"stop","L5T C6R P7H D59W G152L Y175*",6
"lib2","SARS-CoV-2","TATAGTATACATACGT",1,38.39,10.81,-0.02,0.05,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAGTATAGACTATG",4,76.72,10.27,-0.57,0.03,2.96,1.04,0,">1 nonsynonymous","V37K T63R R136L",3
"lib2","SARS-CoV-2","TATAGTATAGTAACGG",1,28.87,10.28,-0.55,0.09,2.88,1.14,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TATAGTATATACCCGT",3,14.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99D N157R T201S",3
"lib2","SARS-CoV-2","TATAGTATCAGTAGTC",6,90.42,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C31L L38M N107P R136I Y175G G196L",6
"lib2","SARS-CoV-2","TATAGTATGAATACCC",8,32.3,6.32,-4.52,0.29,3,1.23,0,">1 nonsynonymous","V103R L125S E141R",3
"lib2","SARS-CoV-2","TATAGTCAAGAAACAC",5,46.94,9.59,-1.24,0.08,2.2,1.04,0,">1 nonsynonymous","F62L R78C D90I",3
"lib2","SARS-CoV-2","TATAGTCCAGAAAGTC",2,11.83,6.11,-4.72,0.81,1.75,1.16,0.02,">1 nonsynonymous","A14S Y93M D98N W106S",4
"lib2","SARS-CoV-2","TATAGTCCGCCGTACA",11,67.53,6.06,-4.77,1.34,1.5,1.22,0.03,">1 nonsynonymous","V11G K48M T55P G196T",4
"lib2","SARS-CoV-2","TATAGTCGCAATTTAA",9,231.79,10.23,-0.6,0.02,2.85,1.03,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","TATAGTCTGTCCTCTA",2,0.06,NA,NA,NA,NA,NA,NA,"stop","K48E G83P K198*",3
"lib2","SARS-CoV-2","TATAGTGACAACATTC",5,46.78,9.57,-1.27,0.08,1.92,1.09,0,">1 nonsynonymous","Y35T S139V",2
"lib2","SARS-CoV-2","TATAGTGACAAGTTGA",4,23.02,9.69,-1.14,0.12,2.22,1.01,0.01,">1 nonsynonymous","S129L S139F",2
"lib2","SARS-CoV-2","TATAGTGACAGTGACG",3,19.71,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T15S Y35D W106K N120H P133D T140G",6
"lib2","SARS-CoV-2","TATAGTGCAAACAACG",19,254.17,9.88,-0.96,0.03,2.93,1.07,0,">1 nonsynonymous","D90R E154L",2
"lib2","SARS-CoV-2","TATAGTGCGTACCAGG",7,88.54,10.83,0,0.06,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATAGTGTATTATCTA",6,76.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N92K I142M",2
"lib2","SARS-CoV-2","TATAGTTATTAACGAG",5,65.24,10.71,-0.12,0.04,2.92,1.1,0,">1 nonsynonymous","S29P L60Y",2
"lib2","SARS-CoV-2","TATAGTTATTTACGTA",15,102,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F47M I88T D97C E141C T201P",5
"lib2","SARS-CoV-2","TATAGTTCCGTAGCCA",7,167.86,10.21,-0.62,0.06,2.61,1.03,0,">1 nonsynonymous","S139F K199I",2
"lib2","SARS-CoV-2","TATAGTTCTAACTCAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","TATAGTTGAAATCGAG",4,17.39,9.97,-0.87,0.09,2.83,1.13,0.01,">1 nonsynonymous","S45K S53P C195N",3
"lib2","SARS-CoV-2","TATAGTTTAAACAACC",10,119.03,10.65,-0.18,0.04,2.95,1.05,0,">1 nonsynonymous","T3L S45D S139T N151A",4
"lib2","SARS-CoV-2","TATAGTTTAACCAGAG",4,1.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3N C49H P82R",3
"lib2","SARS-CoV-2","TATAGTTTAGCGAATC",8,71.21,10.76,-0.07,0.05,2.91,1.03,0,">1 nonsynonymous","S41Y N64Y",2
"lib2","SARS-CoV-2","TATAGTTTTGCTCTTT",4,23.13,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","N1W V37Y N107Q S139T G166D",5
"lib2","SARS-CoV-2","TATATAAAAAAGTATA",4,19.06,8.72,-2.11,0.15,1.81,1.1,0.01,">1 nonsynonymous","N13L Y91I",2
"lib2","SARS-CoV-2","TATATAAAATTAACCT",1,7.06,9.64,-1.2,0.17,1.8,1,0.02,">1 nonsynonymous","N13Y S41V V52D T55M",4
"lib2","SARS-CoV-2","TATATAAACCAAACTT",4,23.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S129K F167A",2
"lib2","SARS-CoV-2","TATATAAACGAGGCCA",10,92.88,10.37,-0.47,0.04,2.78,1.03,0,">1 nonsynonymous","L57I A105T E154R",3
"lib2","SARS-CoV-2","TATATAAAGAGTAACA",7,70.84,9.72,-1.11,0.09,2.56,1,0,">1 nonsynonymous","L5T Y121R",2
"lib2","SARS-CoV-2","TATATAAATATCTCCT",1,28.1,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A89R L95P",2
"lib2","SARS-CoV-2","TATATAACAAGAATAA",8,45.37,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","G51F G86E Y143P V153Y",4
"lib2","SARS-CoV-2","TATATAACCAATGACC",2,64.22,10.7,-0.14,0.04,2.98,1.05,0,">1 nonsynonymous","S43L C61R N130C",3
"lib2","SARS-CoV-2","TATATAACCTCGTCAT",2,67.17,7.05,-3.78,0.11,2.18,1.09,0,">1 nonsynonymous","S43Y C158H",2
"lib2","SARS-CoV-2","TATATAACGATTTAAA",14,2.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6T N13V S29E L122D P161S L183T",6
"lib2","SARS-CoV-2","TATATAACTCTTTAGG",8,47.29,7,-3.83,0.48,1.5,1.15,0.04,">1 nonsynonymous","T85R W106K F134I",3
"lib2","SARS-CoV-2","TATATAAGAATCGAAC",2,20.85,10.18,-0.66,0.1,2.48,1,0,">1 nonsynonymous","G9Y Y21S",2
"lib2","SARS-CoV-2","TATATAAGAATTTTGA",1,71.87,9.64,-1.2,0.07,2.75,1.07,0,">1 nonsynonymous","Y91F N107E",2
"lib2","SARS-CoV-2","TATATAAGGAGTATCA",2,19.71,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","A14V F126G P177K",3
"lib2","SARS-CoV-2","TATATAAGTAAAGAAA",5,17.94,9.01,-1.82,0.17,2.01,1.12,0.01,">1 nonsynonymous","C6M D98V",2
"lib2","SARS-CoV-2","TATATAAGTACTGATT",3,0.1,NA,NA,NA,NA,NA,NA,"stop","A89C D97*",2
"lib2","SARS-CoV-2","TATATAAGTGACGATT",7,204.37,10.23,-0.6,0.02,2.96,1,0,">1 nonsynonymous","P7M V11L V173A",3
"lib2","SARS-CoV-2","TATATAATAAAGGAGA",6,26.83,10.85,0.01,0.12,2.87,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TATATAATAAATATCA",12,583.65,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y119G Q176V",2
"lib2","SARS-CoV-2","TATATAATAAGAATAA",10,90.82,10.58,-0.25,0.04,2.94,1.09,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TATATAATAATCCAGG",3,74.28,10.35,-0.49,0.08,2.69,1.12,0,"1 nonsynonymous","V52S",1
"lib2","SARS-CoV-2","TATATAATACAACTTT",8,97.17,10.16,-0.67,0.05,2.68,1.05,0,">1 nonsynonymous","I2T D90V",2
"lib2","SARS-CoV-2","TATATAATATCAAGGT",5,102.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D97N Y143M C150T",3
"lib2","SARS-CoV-2","TATATAATCAATAGAT",8,62.44,6,-4.84,0.64,1.5,1.12,0,">1 nonsynonymous","V32P F99I I138S",3
"lib2","SARS-CoV-2","TATATAATCACATTAA",2,17.53,6.12,-4.72,1.23,1.5,1.26,0.05,">1 nonsynonymous","I28R Y93I E141R",3
"lib2","SARS-CoV-2","TATATAATGTACAATT",18,70.44,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33L S43T Y93L V173F",4
"lib2","SARS-CoV-2","TATATAATTCTAGACT",1,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101S P149T Y175V",3
"lib2","SARS-CoV-2","TATATACAAAATTTCA",3,8.36,6,-4.84,1.56,1.5,1.09,0.01,">1 nonsynonymous","L60M Q79T R127L P149Q",4
"lib2","SARS-CoV-2","TATATACAACCTACAA",1,0.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87L L95F",2
"lib2","SARS-CoV-2","TATATACAGAACTACA",2,44.51,11,0.16,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TATATACCATAACGCT",11,51.27,6,-4.84,1.16,1.5,1.16,0.01,">1 nonsynonymous","S45K N64P Y91R N110D Y123K S139F T148I",7
"lib2","SARS-CoV-2","TATATACCCAAGCAGT",3,0.41,NA,NA,NA,NA,NA,NA,"stop","C6A S36* D68K G86R",4
"lib2","SARS-CoV-2","TATATACCCGCCAACA",11,138.87,9.93,-0.91,0.04,2.64,1.06,0,">1 nonsynonymous","C6V A42R K128L",3
"lib2","SARS-CoV-2","TATATACCCTCGCGTT",7,124.1,9.32,-1.51,0.06,2.91,1.1,0,">1 nonsynonymous","K56R Y119M",2
"lib2","SARS-CoV-2","TATATACCGAAAACCC",1,15.25,10.82,-0.01,0.11,2.85,1.18,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TATATACCTATCAACA",1,75.22,9.69,-1.15,0.09,2.19,1,0,">1 nonsynonymous","P7Q A33R Y39D K56G I88V S184V",6
"lib2","SARS-CoV-2","TATATACGACTCCGAC",2,19.08,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","F8E R179G",2
"lib2","SARS-CoV-2","TATATACGCGAAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39* D98N N107L G146E",4
"lib2","SARS-CoV-2","TATATACGGATATCCT",1,11.58,10.77,-0.07,0.07,2.98,1,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","TATATACGGTCAGAAA",1,57.34,10.17,-0.67,0.06,2.72,1.13,0,">1 nonsynonymous","A14V K48N",2
"lib2","SARS-CoV-2","TATATAGAACCGCAAC",6,115.51,9.77,-1.07,0.06,2.26,1.06,0,">1 nonsynonymous","A67F D98C",2
"lib2","SARS-CoV-2","TATATAGAAGAATTGC",6,97.1,10.18,-0.66,0.05,2.86,1.05,0,">1 nonsynonymous","V32Q N120C S129V",3
"lib2","SARS-CoV-2","TATATAGACTCTTTCC",1,0.2,NA,NA,NA,NA,NA,NA,"stop","G9* S41V I138M",3
"lib2","SARS-CoV-2","TATATAGAGAAAGAAA",10,68.72,10.39,-0.44,0.04,2.88,1.04,0,">1 nonsynonymous","G83D T100R",2
"lib2","SARS-CoV-2","TATATAGAGAGCACCT",7,1.17,NA,NA,NA,NA,NA,NA,"stop","V11R S19K N64S P149T C195*",5
"lib2","SARS-CoV-2","TATATAGATATAAGGA",3,17.48,6,-4.84,2,3,1.27,0.02,">1 nonsynonymous","C6D S19Y N40P V180E",4
"lib2","SARS-CoV-2","TATATAGATCCGGACT",13,242.36,10.33,-0.51,0.05,2.98,1.04,0,">1 nonsynonymous","S43T D90H F156P",3
"lib2","SARS-CoV-2","TATATAGATGCAATAA",2,19.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R179E S200L",2
"lib2","SARS-CoV-2","TATATAGATGCACCAA",2,31.97,8.85,-1.99,0.06,2.64,1.07,0,">1 nonsynonymous","R73P E141S",2
"lib2","SARS-CoV-2","TATATAGCTCTACTCC",8,76.29,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16Y A22S W23C E135I",4
"lib2","SARS-CoV-2","TATATAGGACGACACA",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S F99V",2
"lib2","SARS-CoV-2","TATATAGGATTATCAT",4,8.69,9.67,-1.16,0.17,1.98,1.1,0.02,">1 nonsynonymous","L5W Y35E D59W",3
"lib2","SARS-CoV-2","TATATAGGATTGACAT",5,71.44,10.96,0.13,0.05,3,1,0,"1 nonsynonymous","V153Q",1
"lib2","SARS-CoV-2","TATATAGGTTGTATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G172* H189T",2
"lib2","SARS-CoV-2","TATATAGTGCATAGCA",2,7.44,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13I D34E S43G",3
"lib2","SARS-CoV-2","TATATAGTGTACGTGG",13,144.46,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7W Y35R P161W",3
"lib2","SARS-CoV-2","TATATAGTTTCATCGT",4,22.88,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","V37T C49S D59A P169S",4
"lib2","SARS-CoV-2","TATATAGTTTTACAAC",1,59.71,10.66,-0.17,0.06,2.92,1.07,0,">1 nonsynonymous","V37T Y121L",2
"lib2","SARS-CoV-2","TATATATAACCAGACG",8,100.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2N V32M V103M R136G",4
"lib2","SARS-CoV-2","TATATATAACGGCGTT",8,53.71,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D59S N92T",2
"lib2","SARS-CoV-2","TATATATAATGCCAAA",1,5.76,NA,NA,NA,NA,NA,0.5,">1 nonsynonymous","P7K C61L P82E I104T P149S G152V",6
"lib2","SARS-CoV-2","TATATATATATAAATT",6,95.9,10.81,-0.03,0.04,2.94,1.08,0,"1 nonsynonymous","E10D",1
"lib2","SARS-CoV-2","TATATATATCAAGAAA",15,191.47,10.87,0.03,0.04,2.89,1.12,0,"1 nonsynonymous","V153L",1
"lib2","SARS-CoV-2","TATATATATTAAAAAT",6,10.3,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N1S W23R D34Y W106Y N118V",5
"lib2","SARS-CoV-2","TATATATGTAAAGGAT",10,178.17,9.74,-1.1,0.07,2.35,1.01,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TATATATTAGCTAGTA",10,89.14,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K48Y T55C G83A P161R P169D",5
"lib2","SARS-CoV-2","TATATATTGAATTCTG",16,98.18,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A18T Y93F E135T L162S K198W",5
"lib2","SARS-CoV-2","TATATATTGATCTGGC",10,132.53,6.75,-4.08,0.27,1.5,1.15,0.01,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","TATATCAAAAAATATA",4,90.1,9.02,-1.82,0.08,1.76,1.08,0,">1 nonsynonymous","V103M V173A",2
"lib2","SARS-CoV-2","TATATCAAAACATTTC",1,15.83,9.46,-1.37,0.14,2.23,1.12,0.01,">1 nonsynonymous","T55H C61T D90R P96S P149E",5
"lib2","SARS-CoV-2","TATATCAAAAGCAAGT",7,10.65,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41F G101A P149S L162V V173F",5
"lib2","SARS-CoV-2","TATATCAAAGTAAAGT",3,17.85,8.53,-2.3,0.32,1.5,1.04,0.06,">1 nonsynonymous","S45D F99T",2
"lib2","SARS-CoV-2","TATATCAATAAAACGA",3,26.37,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L95N P149I G172V S200L",4
"lib2","SARS-CoV-2","TATATCACATGCGCCT",5,42.46,10.68,-0.15,0.06,2.8,1.16,0,"1 nonsynonymous","T201W",1
"lib2","SARS-CoV-2","TATATCACCATAATAA",5,0.96,NA,NA,NA,NA,NA,NA,"stop","V32* K94H P149S Y165L",4
"lib2","SARS-CoV-2","TATATCACTACACGAA",2,18.64,6.48,-4.36,0.46,2.16,1.22,0.02,">1 nonsynonymous","A14W A89T K128H I142F",4
"lib2","SARS-CoV-2","TATATCACTATTATTA",1,18.35,6.32,-4.52,0.86,1.5,1.1,0.03,">1 nonsynonymous","S139M F167V",2
"lib2","SARS-CoV-2","TATATCAGAATTCTCC",9,100.3,10.44,-0.4,0.05,2.93,1.05,0,"1 nonsynonymous","G155E",1
"lib2","SARS-CoV-2","TATATCAGTGGCCACT",4,94.95,6,-4.84,2,1.5,1.22,0.03,"1 nonsynonymous","G101L",1
"lib2","SARS-CoV-2","TATATCAGTTGATAAT",8,149.59,6.85,-3.99,0.17,1.5,1.1,0,">1 nonsynonymous","N40M R73Q K128V P169S G174E",5
"lib2","SARS-CoV-2","TATATCATAACAAAAA",1,6.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y Q163A",2
"lib2","SARS-CoV-2","TATATCATAACACTTA",21,177.35,8.66,-2.18,0.08,2.5,1.08,0,">1 nonsynonymous","P54N G117F",2
"lib2","SARS-CoV-2","TATATCATGAAAATTA",8,18.59,6,-4.84,2,3,1.17,0.03,">1 nonsynonymous","F12E A89Y D98C V103D Y119P V173L",6
"lib2","SARS-CoV-2","TATATCATTCAGTGAA",4,76.09,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F12Y V32P L57P L111W",4
"lib2","SARS-CoV-2","TATATCCAAACAGTGA",1,5.22,10.74,-0.1,0.05,2.98,1.03,0,">1 nonsynonymous","L122T K198L",2
"lib2","SARS-CoV-2","TATATCCAAACTAACT",8,129.36,8.38,-2.45,0.12,2.81,1.07,0.01,">1 nonsynonymous","P149N N157R",2
"lib2","SARS-CoV-2","TATATCCAGAATTAAT",2,7.68,6.13,-4.71,0.82,3,1.19,0.02,">1 nonsynonymous","D34V G86T G174E L183C S200I",5
"lib2","SARS-CoV-2","TATATCCATGAATCGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86F N92V Q168S",3
"lib2","SARS-CoV-2","TATATCCATTAATGCA",1,12.94,10.6,-0.24,0.1,2.82,1.09,0.01,"1 nonsynonymous","P169M",1
"lib2","SARS-CoV-2","TATATCCATTATGGAA",1,65.43,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T3S G117N Y143N P149R",4
"lib2","SARS-CoV-2","TATATCCCAAGGGAAC",2,59.57,9.52,-1.32,0.08,2.74,1.09,0,">1 nonsynonymous","V37L K56V D98N N107E N130A",5
"lib2","SARS-CoV-2","TATATCCCATTTCGAT",2,14.55,10.72,-0.12,0.06,3,1.02,0,">1 nonsynonymous","N110R E135H T201H",3
"lib2","SARS-CoV-2","TATATCCCGTCATTGG",8,127.35,9.77,-1.06,0.08,1.96,1.07,0,">1 nonsynonymous","N40T P133R",2
"lib2","SARS-CoV-2","TATATCCCTCTGCTGA",1,23.45,10.14,-0.7,0.13,2.67,1,0.01,">1 nonsynonymous","I72M K198N",2
"lib2","SARS-CoV-2","TATATCCGGTAAGTCC",2,663.19,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L5Y C49G R73V",3
"lib2","SARS-CoV-2","TATATCCTAACCAGAT",13,6.01,NA,NA,NA,NA,NA,NA,"stop","R127G K132*",2
"lib2","SARS-CoV-2","TATATCCTATCCCTAA",7,105.88,6,-4.84,0.93,1.5,1.18,0.01,">1 nonsynonymous","N107T P133V S139M",3
"lib2","SARS-CoV-2","TATATCCTGAGTAATC",13,100.74,10.79,-0.04,0.05,2.88,1.07,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","TATATCGCAGAAGGTC",13,138.71,8.32,-2.51,0.1,2.51,1.08,0,">1 nonsynonymous","S53W N157T",2
"lib2","SARS-CoV-2","TATATCGCGTAAATCC",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89C V103L G174V",3
"lib2","SARS-CoV-2","TATATCGCTCAATTAA",1,5.47,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","G9I D68A Y91G T140H",4
"lib2","SARS-CoV-2","TATATCGGAGATAGAA",1,53.99,6.23,-4.61,0.8,1.5,1.13,0.02,">1 nonsynonymous","D98P W106P G166P",3
"lib2","SARS-CoV-2","TATATCGTAAAACGAC",1,21.2,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W23R S113L",2
"lib2","SARS-CoV-2","TATATCGTATATTAGA",1,9.04,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","V77P Q84L I104K K128E",4
"lib2","SARS-CoV-2","TATATCTAATCACAAT",3,33.55,10.8,-0.04,0.07,2.86,1.17,0,">1 nonsynonymous","K56V L60R",2
"lib2","SARS-CoV-2","TATATCTACGTATTAC",11,9.23,NA,NA,NA,NA,NA,NA,"stop","K26W S69W N92R E141* Y165K",5
"lib2","SARS-CoV-2","TATATCTAGAGCTAGA",9,46.6,8.88,-1.96,0.27,1.5,1.07,0.03,"1 nonsynonymous","V181Q",1
"lib2","SARS-CoV-2","TATATCTCAATCCAAC",2,46.76,10.76,-0.08,0.08,2.97,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TATATCTGCACATGTG",6,40.69,7.25,-3.59,0.43,1.5,1.04,0.05,">1 nonsynonymous","P161M G174V",2
"lib2","SARS-CoV-2","TATATCTGGCCCTCCA",5,12.79,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I88L W106D D112I P191L",4
"lib2","SARS-CoV-2","TATATCTTAGGCGGCT",1,7.55,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","S29L G74V G86Y L95Q S113F",5
"lib2","SARS-CoV-2","TATATCTTGAATGACT",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T T63A A89V",3
"lib2","SARS-CoV-2","TATATGAAAACTGACT",5,34.41,6,-4.84,2,3,1.33,0.03,">1 nonsynonymous","S41V V52I G86S L111R I142Y",5
"lib2","SARS-CoV-2","TATATGAAAATATCAA",4,140.74,9.72,-1.12,0.07,2.34,1.05,0,">1 nonsynonymous","N13Y N110C",2
"lib2","SARS-CoV-2","TATATGAAACTAGACT",2,16.32,10.79,-0.05,0.06,2.82,1.12,0,">1 nonsynonymous","T55A N64S F160T",3
"lib2","SARS-CoV-2","TATATGAAACTCCGCT",28,89.9,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A42S V103E",2
"lib2","SARS-CoV-2","TATATGAACTTTGGTC",3,27.31,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R25T N40V T100N G116E L187Q",5
"lib2","SARS-CoV-2","TATATGAATAAATCAT",5,153.57,8.74,-2.09,0.07,3,1.06,0,">1 nonsynonymous","F126R L187M L188M",3
"lib2","SARS-CoV-2","TATATGACTATCTAAG",3,28.76,9.63,-1.2,0.13,2.19,1.05,0.01,"1 nonsynonymous","A14W",1
"lib2","SARS-CoV-2","TATATGACTGGCCCAA",10,60.92,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","A81S K94C A105C D112A",4
"lib2","SARS-CoV-2","TATATGAGAAAAGTTT",6,1.12,NA,NA,NA,NA,NA,NA,"stop","A14* Y159F",2
"lib2","SARS-CoV-2","TATATGCAATACAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W D98V Y123P",3
"lib2","SARS-CoV-2","TATATGCAGTACCATC",2,55.86,6.43,-4.41,0.57,1.5,1.22,0.02,">1 nonsynonymous","S147L Y165E",2
"lib2","SARS-CoV-2","TATATGCGAAGGCACC",3,34.57,9.78,-1.05,0.12,1.98,1,0.01,">1 nonsynonymous","T3Y A67V A105V",3
"lib2","SARS-CoV-2","TATATGCGATAGCCCA",1,0.64,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E154D",1
"lib2","SARS-CoV-2","TATATGCTCGTCACTT",6,6.48,8.71,-2.13,0.47,3,1,0.04,">1 nonsynonymous","F12H V52H V65E V103P N151D",5
"lib2","SARS-CoV-2","TATATGGACAGAGTAC",11,291.08,9.15,-1.69,0.04,2.87,1.09,0,">1 nonsynonymous","E10G Y119Q",2
"lib2","SARS-CoV-2","TATATGGAGAGTAATA",1,3.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67D K87N Y121L N171T",4
"lib2","SARS-CoV-2","TATATGGAGATGTACT",9,60.5,6,-4.84,1.71,1.5,1.17,0.02,">1 nonsynonymous","G86C C102Y V103M P161N K199T",5
"lib2","SARS-CoV-2","TATATGGATGCGATGC",3,92.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2N Q79A L95M Y123V Q176S V182S",6
"lib2","SARS-CoV-2","TATATGGCATCTGCAA",6,16.56,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N92S W106P",2
"lib2","SARS-CoV-2","TATATGGCTTGAGAGT",4,48.86,9.74,-1.09,0.07,2.19,1.02,0,">1 nonsynonymous","P149F Y178L",2
"lib2","SARS-CoV-2","TATATGGTTAATTGCC",1,38.12,10.85,0.02,0.1,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TATATGTAAGTTATTG",2,7.27,6,-4.84,2,3,1.04,0,">1 nonsynonymous","D59L A81T V115S S139W",4
"lib2","SARS-CoV-2","TATATGTCAAGTGCTT",3,0.12,NA,NA,NA,NA,NA,NA,"stop","L122I V173D S184*",3
"lib2","SARS-CoV-2","TATATGTCAGGAAATA",2,32.09,10.19,-0.64,0.22,2.53,1.41,0.02,">1 nonsynonymous","E10S C61I Q163R",3
"lib2","SARS-CoV-2","TATATGTCATTCATGG",4,59.69,10.64,-0.19,0.07,2.93,1.05,0,">1 nonsynonymous","N120V S164N S200I",3
"lib2","SARS-CoV-2","TATATTAAACCCTGTT",14,47.61,9.46,-1.38,0.11,1.7,1.09,0,">1 nonsynonymous","A14E I88M S164R",3
"lib2","SARS-CoV-2","TATATTAACACGCGGC",1,29.28,10.65,-0.18,0.06,2.98,1.03,0,">1 nonsynonymous","T3G L60R",2
"lib2","SARS-CoV-2","TATATTAAGAGCGACA",13,6.4,NA,NA,NA,NA,NA,NA,"stop","L5* Q79P",2
"lib2","SARS-CoV-2","TATATTAATATTAAAC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","T85* D137N",2
"lib2","SARS-CoV-2","TATATTAATCCACGTG",5,25.53,7.92,-2.91,0.16,1.9,1.12,0.01,">1 nonsynonymous","N58L N107M",2
"lib2","SARS-CoV-2","TATATTAATCGAATGT",9,58.02,9.41,-1.43,0.08,1.84,1.03,0,">1 nonsynonymous","G86A S200Q",2
"lib2","SARS-CoV-2","TATATTAATTATAATG",5,21.28,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C6T N24L S43Y D90H A105S R124A T201S",7
"lib2","SARS-CoV-2","TATATTAATTCTATAC",3,37.16,9.63,-1.2,0.12,2.33,1.04,0.01,">1 nonsynonymous","V37G A105G G116L",3
"lib2","SARS-CoV-2","TATATTAGATCACAGT",6,101.46,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16M N107R R124G",3
"lib2","SARS-CoV-2","TATATTAGATTAAATG",8,5.08,NA,NA,NA,NA,NA,NA,"stop","N1* F62C G174L",3
"lib2","SARS-CoV-2","TATATTAGCGTGAAAA",1,46.37,9.36,-1.48,0.08,2.75,1.06,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","TATATTAGCTGATTTT",4,95.25,10.34,-0.5,0.04,2.95,1.06,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","TATATTAGCTTAGGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","R25K Y93P T201*",3
"lib2","SARS-CoV-2","TATATTAGGTAACCCA",3,6.88,10.09,-0.74,0.45,1.52,1,0.07,">1 nonsynonymous","L57W I104S F160Q",3
"lib2","SARS-CoV-2","TATATTAGTAAGCACA",2,13.57,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12I D90N I104Y R136I S147I T201S",6
"lib2","SARS-CoV-2","TATATTATACCATGAA",6,103.16,10.21,-0.62,0.04,2.78,1.04,0,">1 nonsynonymous","E10D N13K S43W E141N",4
"lib2","SARS-CoV-2","TATATTATACTGAGAA",4,3.49,NA,NA,NA,NA,NA,NA,"stop","N30G D90* N157S",3
"lib2","SARS-CoV-2","TATATTATCAATTCCA",7,117.89,10.5,-0.34,0.05,2.93,1.07,0,"1 nonsynonymous","D98W",1
"lib2","SARS-CoV-2","TATATTATTCGTTTAC",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q A89V",2
"lib2","SARS-CoV-2","TATATTATTTCTGTGG",5,47.12,9.29,-1.54,0.12,1.73,1.07,0.01,">1 nonsynonymous","V20T V37S A81Q",3
"lib2","SARS-CoV-2","TATATTCAAAAAGTAA",1,7.11,8.88,-1.96,0.16,2.68,1.17,0.01,">1 nonsynonymous","P7V Y159W",2
"lib2","SARS-CoV-2","TATATTCGAATATTTA",1,43.02,10.85,0.02,0.06,2.88,1.14,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","TATATTCTAGTTATAG",8,79.77,9.04,-1.8,0.09,1.69,1.11,0,"1 nonsynonymous","L95F",1
"lib2","SARS-CoV-2","TATATTCTATCCATGA",5,137.58,6.07,-4.76,0.46,1.5,1.14,0.01,">1 nonsynonymous","V115A P177G K199D",3
"lib2","SARS-CoV-2","TATATTCTCGCCGGCT",11,0.29,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","TATATTCTGAACCCGG",4,42.55,10.78,-0.06,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATATTCTGGAACTAA",18,77.41,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G74F F99P Y143L H189N",4
"lib2","SARS-CoV-2","TATATTCTTTGGCATG",3,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Q A67T G74E G83Y P96M",5
"lib2","SARS-CoV-2","TATATTGAAACTGCGT",6,27.34,6.86,-3.97,0.49,1.5,1.24,0.03,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","TATATTGAAGTTTTCG",5,75,9.98,-0.86,0.06,2.88,1,0,">1 nonsynonymous","Y91W P149T",2
"lib2","SARS-CoV-2","TATATTGAGAAGTAAT",9,0.2,NA,NA,NA,NA,NA,NA,"stop","F126Q P169*",2
"lib2","SARS-CoV-2","TATATTGAGCTTTAGT",4,53.5,10.82,-0.02,0.06,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TATATTGCTACTATAT",15,236.15,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A14V V103I D112E P177H",4
"lib2","SARS-CoV-2","TATATTGGAACCGTAA",1,117.92,10.85,0.01,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATATTGGATCCAATG",4,4.14,NA,NA,NA,NA,NA,NA,"stop","A33* E141P",2
"lib2","SARS-CoV-2","TATATTGTACCCGTTC",22,4.06,NA,NA,NA,NA,NA,NA,"stop","L38T S45C K56* F62A G117P R136F",6
"lib2","SARS-CoV-2","TATATTGTTATAATTA",1,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F N120K",2
"lib2","SARS-CoV-2","TATATTGTTCTACCGC",4,0.05,NA,NA,NA,NA,NA,NA,"stop","A89* C158V",2
"lib2","SARS-CoV-2","TATATTTAGCCTTTAA",1,29.56,8.8,-2.03,0.2,1.71,1.16,0.01,">1 nonsynonymous","Y121T I138K",2
"lib2","SARS-CoV-2","TATATTTAGTTTGGAG",4,78.12,10.2,-0.63,0.04,2.78,1.06,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","TATATTTATTAGTAAA",8,43.47,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F44L C61P R124N",3
"lib2","SARS-CoV-2","TATATTTCACGACAGA",6,214.66,6,-4.84,1.11,1.5,1.12,0,">1 nonsynonymous","A33S Y39I N120L Y165R T201K",5
"lib2","SARS-CoV-2","TATATTTCACTGACAT",6,68.42,10.74,-0.09,0.04,3,1.01,0,">1 nonsynonymous","Y39V S129R F160E",3
"lib2","SARS-CoV-2","TATATTTCGTAATCTT",5,50.86,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R25V Y39R L60T K94G F156S",5
"lib2","SARS-CoV-2","TATATTTCTCCTATCT",5,117.7,9.13,-1.7,0.03,2.92,1.08,0,">1 nonsynonymous","Y119C H189N",2
"lib2","SARS-CoV-2","TATATTTTATCAACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","TATATTTTTGAACACG",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* K132T",2
"lib2","SARS-CoV-2","TATATTTTTGCGTACG",5,67.09,8.98,-1.86,0.08,1.86,1.04,0,">1 nonsynonymous","R27T N107S N120C I142M",4
"lib2","SARS-CoV-2","TATCAAAAAATAACCT",8,49.11,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I72V I88L N107T R127C",4
"lib2","SARS-CoV-2","TATCAAAACTTTAAAA",3,42.49,10.79,-0.05,0.04,2.9,1.09,0,"1 nonsynonymous","L60K",1
"lib2","SARS-CoV-2","TATCAAAAGTACGCAG",5,53.9,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","T3H I72A Y119L",3
"lib2","SARS-CoV-2","TATCAAAAGTTAGTCA",8,61.42,9.16,-1.67,0.03,2.75,1.13,0,">1 nonsynonymous","V32I N107D",2
"lib2","SARS-CoV-2","TATCAAAATAAGTGCG",8,111.4,6,-4.84,2,2.06,1.13,0,">1 nonsynonymous","F8P A14L D90T D112T I138C K198T",6
"lib2","SARS-CoV-2","TATCAAACACCACGCT",1,26.94,9.06,-1.78,0.11,1.9,1.14,0.01,">1 nonsynonymous","S41Y N64L V77T S139R",4
"lib2","SARS-CoV-2","TATCAAACACTTACGA",3,11.26,6.44,-4.4,0.44,3,1.17,0.01,">1 nonsynonymous","T3H R25M G152A",3
"lib2","SARS-CoV-2","TATCAAACACTTCACT",5,40.59,10.89,0.06,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCAAACATATCAAG",3,16.48,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","L57G E76S Y119W K198R",4
"lib2","SARS-CoV-2","TATCAAACGTAAAAAG",10,43.52,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A67D P96F Y119M",3
"lib2","SARS-CoV-2","TATCAAACTACAATAA",7,36.4,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G51V G74A K87V D98P G174V",5
"lib2","SARS-CoV-2","TATCAAACTTGAGGTC",6,75.85,9.59,-1.24,0.07,1.95,1.04,0,">1 nonsynonymous","G9V G51D N151Q",3
"lib2","SARS-CoV-2","TATCAAATAAGAGTAA",8,1.07,NA,NA,NA,NA,NA,NA,"stop","Q144* G146T",2
"lib2","SARS-CoV-2","TATCAAATACGTAGGC",7,0.71,NA,NA,NA,NA,NA,NA,"stop","F134G C158*",2
"lib2","SARS-CoV-2","TATCAAATATTTATGG",4,71.83,10.84,0.01,0.06,2.91,1.11,0,"1 nonsynonymous","L5Y",1
"lib2","SARS-CoV-2","TATCAAATGAAGTGAG",3,37.14,8.77,-2.07,0.19,1.5,1.12,0.01,">1 nonsynonymous","S43W P54L R136D",3
"lib2","SARS-CoV-2","TATCAAATGCATGCAT",1,48.06,10.49,-0.35,0.04,2.94,1.04,0,"1 nonsynonymous","N13H",1
"lib2","SARS-CoV-2","TATCAAATTTGACGTG",14,104.54,6,-4.84,2,3,1.13,0,"1 nonsynonymous","C158W",1
"lib2","SARS-CoV-2","TATCAAATTTTCCAAG",21,197.34,10.85,0.01,0.05,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TATCAACAAAATTACA",2,41.82,11.03,0.2,0.06,2.93,1.08,0,">1 nonsynonymous","A42R Q163A",2
"lib2","SARS-CoV-2","TATCAACAAATAGCAA",5,5.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R P96S",2
"lib2","SARS-CoV-2","TATCAACAAGAAATAC",8,44.95,NA,NA,NA,NA,NA,NA,"stop","F8* G166I",2
"lib2","SARS-CoV-2","TATCAACAAGAGGGAT",2,0.82,NA,NA,NA,NA,NA,NA,"stop","C6N C61* Y119S R136W",4
"lib2","SARS-CoV-2","TATCAACAATATGAAG",1,21.8,10.19,-0.65,0.08,2.89,1.09,0,"1 nonsynonymous","K48W",1
"lib2","SARS-CoV-2","TATCAACATAAACACG",7,25.8,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G101Q T201W",2
"lib2","SARS-CoV-2","TATCAACATACGTTGT",4,55.85,10.76,-0.07,0.06,2.91,1.08,0,"1 nonsynonymous","L38I",1
"lib2","SARS-CoV-2","TATCAACATTGAAACA",1,7.5,8.39,-2.44,0.34,1.7,1.01,0.05,">1 nonsynonymous","N13M Y119V P177V T201R",4
"lib2","SARS-CoV-2","TATCAACCCAACCAGG",1,22.19,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F17A S45R K114N D137S K198I",5
"lib2","SARS-CoV-2","TATCAACGCGACAATA",2,0.28,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","TATCAACGGCCCCTTA",16,320.94,10.32,-0.52,0.03,2.86,1.07,0,">1 nonsynonymous","K26L D98P",2
"lib2","SARS-CoV-2","TATCAACTACCATAGA",6,80,10.61,-0.23,0.02,2.91,1.09,0,"1 nonsynonymous","E135T",1
"lib2","SARS-CoV-2","TATCAACTTACAGACC",8,3.95,NA,NA,NA,NA,NA,NA,"stop","E135S S147*",2
"lib2","SARS-CoV-2","TATCAAGAAAACAGTA",2,36.17,10.86,0.02,0.03,2.96,1.05,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","TATCAAGAAACAACAG",1,16.41,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G101S P149T",2
"lib2","SARS-CoV-2","TATCAAGAAATCATTT",1,50.65,9.73,-1.1,0.07,2.78,1.09,0,">1 nonsynonymous","T3S S36R L57I K87M F160G",5
"lib2","SARS-CoV-2","TATCAAGAACAAACCC",3,95.31,10.79,-0.05,0.04,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCAAGCACTATTCT",4,51.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39D C49L R136P N157G Y175K",5
"lib2","SARS-CoV-2","TATCAAGCGAATGTAA",2,60.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8G S29R S113V Y121V",4
"lib2","SARS-CoV-2","TATCAAGCGCTGTTCA",8,144.15,10.35,-0.49,0.06,2.84,1.08,0,">1 nonsynonymous","L38V S45T K128H",3
"lib2","SARS-CoV-2","TATCAAGGCTTCTTCG",4,50.05,10.49,-0.35,0.06,2.97,1,0,">1 nonsynonymous","N1K A89T",2
"lib2","SARS-CoV-2","TATCAAGTTAAGAAAA",5,0.08,NA,NA,NA,NA,NA,NA,"stop","V52*",1
"lib2","SARS-CoV-2","TATCAATACAGCTAGT",2,5.48,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","C6S L60A A89T V103R",4
"lib2","SARS-CoV-2","TATCAATACCATACAG",4,58.96,10.19,-0.64,0.12,2.52,1.05,0.01,">1 nonsynonymous","S43V P96K",2
"lib2","SARS-CoV-2","TATCAATAGACTGGTC",6,218.34,10.54,-0.3,0.06,2.78,1.08,0,">1 nonsynonymous","D59K Q144R",2
"lib2","SARS-CoV-2","TATCAATAGGTCCAGG",6,61.73,8.44,-2.39,0.1,2.89,1.08,0.01,">1 nonsynonymous","C150E Q163A",2
"lib2","SARS-CoV-2","TATCAATCCACAAAAA",10,39.17,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","P54L W106P R136F",3
"lib2","SARS-CoV-2","TATCAATCTATGGCAC",4,65.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I142M G172K",2
"lib2","SARS-CoV-2","TATCAATGAGCCAAGT",7,56.91,9.54,-1.3,0.05,2.16,1,0,">1 nonsynonymous","A81H K87W",2
"lib2","SARS-CoV-2","TATCAATGTAATTCGA",1,27.65,10.59,-0.24,0.08,3,1,0,">1 nonsynonymous","I2Q N24C",2
"lib2","SARS-CoV-2","TATCAATTCTCACAGA",15,236.3,10.19,-0.65,0.01,2.87,1.04,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","TATCAATTCTTACTCG",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M R78P L95V P133Y C158G",5
"lib2","SARS-CoV-2","TATCAATTTTTCACCC",13,329.95,10.46,-0.38,0.03,2.88,1.08,0,">1 nonsynonymous","G83V Y178H",2
"lib2","SARS-CoV-2","TATCACAAAATTACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R G83S F99S",3
"lib2","SARS-CoV-2","TATCACAACGGTGTAT",16,162.72,7.6,-3.23,0.1,1.5,1.12,0,">1 nonsynonymous","W106L N120T",2
"lib2","SARS-CoV-2","TATCACAAGAACGCAG",4,3.47,NA,NA,NA,NA,NA,NA,"stop","N24* F62S G86* Q144F",4
"lib2","SARS-CoV-2","TATCACAAGTGTTCCC",10,16.17,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","A42L P82F Y93V",3
"lib2","SARS-CoV-2","TATCACAATCAACTAA",4,2.34,NA,NA,NA,NA,NA,NA,"stop","I2S S53G P161R Q176*",4
"lib2","SARS-CoV-2","TATCACAATGCCGAGA",1,0.35,NA,NA,NA,NA,NA,NA,"stop","P7Q G51L K56* E76R N107G F134H L183F",7
"lib2","SARS-CoV-2","TATCACACTCCAAAAC",10,16.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C I72M P82T D97Y D112C C158A S164G",7
"lib2","SARS-CoV-2","TATCACATACATGAAC",7,83.23,9.95,-0.89,0.08,2.29,1.08,0,">1 nonsynonymous","C6I S41V A105S",3
"lib2","SARS-CoV-2","TATCACCAACCATTAC",2,13.65,7.36,-3.48,0.53,1.5,1.3,0.06,">1 nonsynonymous","N4L S129L S139I",3
"lib2","SARS-CoV-2","TATCACCATAGTGCGA",3,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7Q S29T C49M K87H W106T P133Y",6
"lib2","SARS-CoV-2","TATCACCCAATGCGAA",7,1.44,NA,NA,NA,NA,NA,NA,"stop","N58M R179*",2
"lib2","SARS-CoV-2","TATCACCTGCAGTTCA",14,95.12,8.86,-1.97,0.15,1.73,1.13,0.01,">1 nonsynonymous","I28R L60T R78P T201R",4
"lib2","SARS-CoV-2","TATCACGAATATGAGT",1,14.25,6,-4.84,0.97,3,1.12,0.01,">1 nonsynonymous","V103R N118H",2
"lib2","SARS-CoV-2","TATCACGACCAAGAGC",11,136.52,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y21K G146P",2
"lib2","SARS-CoV-2","TATCACGGCTTTCCAC",2,24.16,10.69,-0.14,0.04,3,1,0,">1 nonsynonymous","P54R T100C E135T",3
"lib2","SARS-CoV-2","TATCACGTGGATTCAT",1,13.42,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A89L L131S",2
"lib2","SARS-CoV-2","TATCACTAAAATCGTA",4,76.96,10.21,-0.63,0.02,2.93,1.09,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","TATCACTAAAGTGGAG",7,0.48,NA,NA,NA,NA,NA,NA,"stop","F47I G83R K87G L95* A190S",5
"lib2","SARS-CoV-2","TATCACTATCTTATTC",2,40.74,10.86,0.02,0.08,2.83,1.18,0,">1 nonsynonymous","G9N D59Y",2
"lib2","SARS-CoV-2","TATCACTCCATATAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G117*",1
"lib2","SARS-CoV-2","TATCACTTAATCTCAA",5,113.04,10.85,0.01,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCAGAAAAACCAGA",2,17.15,10.03,-0.81,0.16,1.91,1,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","TATCAGAAAAGATAGC",14,367.5,10.33,-0.51,0.02,2.89,1.07,0,">1 nonsynonymous","P7H S43Q Y178A",3
"lib2","SARS-CoV-2","TATCAGAAAGACTAAA",2,19.96,10.9,0.06,0.07,2.97,1.06,0,"1 nonsynonymous","D59A",1
"lib2","SARS-CoV-2","TATCAGAACCAAAAGT",2,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S Y39P R73K Y93E",4
"lib2","SARS-CoV-2","TATCAGACAAGGTAGT",1,12.12,11.1,0.26,0.12,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCAGACGAGTATAA",3,0.04,NA,NA,NA,NA,NA,NA,"stop","I2T G101N G116* R127L",4
"lib2","SARS-CoV-2","TATCAGACTCATATTT",2,17.18,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D97C G117R P161Q",3
"lib2","SARS-CoV-2","TATCAGAGTGTCTGTT",1,19.72,10.64,-0.19,0.05,3,1.01,0,"1 nonsynonymous","E141M",1
"lib2","SARS-CoV-2","TATCAGCAATAAACCA",4,442.64,8.83,-2,0.06,2.3,1.06,0,">1 nonsynonymous","S129P P149F S164T G174R",4
"lib2","SARS-CoV-2","TATCAGCAATACGACG",1,14.97,7.29,-3.55,0.27,1.5,1.04,0.02,">1 nonsynonymous","W23E P169L",2
"lib2","SARS-CoV-2","TATCAGCACAATAACG",2,40.89,7.09,-3.75,0.14,1.97,1.09,0,">1 nonsynonymous","T46H C150G",2
"lib2","SARS-CoV-2","TATCAGCACCGAACCG",2,30.93,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5K I80G Y119L K128T",4
"lib2","SARS-CoV-2","TATCAGCATTCAACCA",3,64.45,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R73N Y93M N118L",3
"lib2","SARS-CoV-2","TATCAGCCCGCACAGA",13,183.5,6,-4.84,0.69,1.5,1.18,0,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","TATCAGCGCTACAACA",2,41.59,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","K56Q I80G D90V G146K",4
"lib2","SARS-CoV-2","TATCAGCGCTCAGAGA",5,0.52,NA,NA,NA,NA,NA,NA,"stop","S36L K87* P177D",3
"lib2","SARS-CoV-2","TATCAGCGGTAGGGCA",12,224.84,10.87,0.04,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCAGCTAAGATTTG",1,14.15,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G51C F62Q",2
"lib2","SARS-CoV-2","TATCAGTAACGCAAAT",8,145.6,8.5,-2.34,0.09,2.79,1.09,0,">1 nonsynonymous","S113L S200M",2
"lib2","SARS-CoV-2","TATCAGTATTGCCGCA",7,311.19,9.98,-0.85,0.05,2.88,1.05,0,"1 nonsynonymous","Q176H",1
"lib2","SARS-CoV-2","TATCAGTCCGCTATTT",3,109.8,6.85,-3.98,0.13,1.89,1.09,0,">1 nonsynonymous","P149I C158H",2
"lib2","SARS-CoV-2","TATCAGTGCCGATAGT",1,100.47,10.41,-0.43,0.03,2.94,1.08,0,"1 nonsynonymous","F156A",1
"lib2","SARS-CoV-2","TATCAGTGCGAGTGCT",3,18.55,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","P7V P54R Y93K N107H E141V",5
"lib2","SARS-CoV-2","TATCATAACTATAAAC",2,46.95,9.51,-1.33,0.06,2.76,1.16,0,">1 nonsynonymous","A22E A145R",2
"lib2","SARS-CoV-2","TATCATAATGACGCAT",6,17.91,6.36,-4.48,0.84,1.5,1.36,0.04,">1 nonsynonymous","G9T F47E Q79L I104G",4
"lib2","SARS-CoV-2","TATCATAATGCTCACC",1,8.83,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T55P F62P R73E S129N F160E",5
"lib2","SARS-CoV-2","TATCATACAAAGGGAT",8,60.96,6.54,-4.3,0.38,1.5,1.13,0.01,">1 nonsynonymous","L122D E135F I142T",3
"lib2","SARS-CoV-2","TATCATACACCAATAA",18,49.95,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","A22E T100N L183G",3
"lib2","SARS-CoV-2","TATCATACAGTAAAAA",1,0.93,NA,NA,NA,NA,NA,NA,"stop","N40* K198R",2
"lib2","SARS-CoV-2","TATCATACATGCTGAA",9,34.78,6,-4.84,1.71,1.5,1.11,0.02,">1 nonsynonymous","D98G I104K Y121P Y175K",4
"lib2","SARS-CoV-2","TATCATACTGACGACC",4,28.79,8.17,-2.66,0.33,1.72,1.3,0.03,">1 nonsynonymous","Y91C T140G P149T A190D",4
"lib2","SARS-CoV-2","TATCATAGCATCGACC",3,33.75,10.86,0.02,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCATAGGACATTAT",1,14.69,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N40L L183G",2
"lib2","SARS-CoV-2","TATCATAGTAGATCGT",1,14.88,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","D59V A105R",2
"lib2","SARS-CoV-2","TATCATAGTTCACTAA",3,1.57,NA,NA,NA,NA,NA,NA,"stop","P82W Y121*",2
"lib2","SARS-CoV-2","TATCATATCTACTGTT",2,13.97,10.57,-0.27,0.09,2.65,1.37,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","TATCATATGAAAACGA",9,30.21,6.2,-4.63,1.22,1.5,1.37,0.07,">1 nonsynonymous","W23N Y35S S41H I104L",4
"lib2","SARS-CoV-2","TATCATATGTCCGTGC",8,155.26,10.19,-0.64,0.04,2.79,1.06,0,">1 nonsynonymous","L5K Y91V",2
"lib2","SARS-CoV-2","TATCATCAATACAACT",1,5.6,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","D98S G101M W106L C150A L183V",5
"lib2","SARS-CoV-2","TATCATCACGGCTTAA",4,103.99,9.97,-0.87,0.07,2.13,1.05,0,">1 nonsynonymous","P96T P191Y",2
"lib2","SARS-CoV-2","TATCATCAGTATTCTT",11,73.77,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23R D112E T140I",3
"lib2","SARS-CoV-2","TATCATCAGTATTTAG",2,14.53,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L95W T140P G152S",3
"lib2","SARS-CoV-2","TATCATCATGTGGGGT",2,7.88,9.65,-1.19,0.11,2.85,1.07,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","TATCATCCAGTAGCCT",3,17.44,9.18,-1.66,0.18,2.57,1.15,0.01,">1 nonsynonymous","V37M L162T G174A",3
"lib2","SARS-CoV-2","TATCATCCCAATTGCT",3,38.5,10.13,-0.71,0.09,2.74,1.05,0,">1 nonsynonymous","A14T I72L K114Q",3
"lib2","SARS-CoV-2","TATCATGAAATTCACC",7,47.86,8.4,-2.44,0.31,1.5,1.08,0.05,">1 nonsynonymous","T46E P54Q A81L",3
"lib2","SARS-CoV-2","TATCATGCCCAGAGCC",4,36.85,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F12L C31L L57F N58C Y66S D97H R136L G146P C150K",9
"lib2","SARS-CoV-2","TATCATGCTAATCAAG",7,1.44,NA,NA,NA,NA,NA,NA,"stop","V103S K128Q G174*",3
"lib2","SARS-CoV-2","TATCATGCTAGTGACG",3,45.34,10.77,-0.07,0.07,2.87,1.13,0,">1 nonsynonymous","P54I N120F",2
"lib2","SARS-CoV-2","TATCATGGGTACGCCT",3,54.99,10.66,-0.17,0.06,2.93,1.03,0,"1 nonsynonymous","V182I",1
"lib2","SARS-CoV-2","TATCATGTCCAGAATA",3,83.09,10.47,-0.37,0.05,2.89,1.08,0,">1 nonsynonymous","F44L A105S",2
"lib2","SARS-CoV-2","TATCATGTTAAAGAGT",7,0.46,NA,NA,NA,NA,NA,NA,"stop","F12Y R27L T55P G83I K94*",5
"lib2","SARS-CoV-2","TATCATTACCACTATA",2,46.75,9.56,-1.27,0.11,2.05,1.15,0,">1 nonsynonymous","S53N L57S D98P N151D",4
"lib2","SARS-CoV-2","TATCATTCACTATCTG",7,15.61,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","D34Y N92T G172W",3
"lib2","SARS-CoV-2","TATCATTCCAAATCAT",3,31.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19R P96R",2
"lib2","SARS-CoV-2","TATCATTCCAAGAAAA",4,40.5,10.67,-0.16,0.05,2.96,1.05,0,">1 nonsynonymous","T15S Y39T P149L",3
"lib2","SARS-CoV-2","TATCATTGAAATAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127D S164L",2
"lib2","SARS-CoV-2","TATCATTGCGCCTTAG",2,0,NA,NA,NA,NA,NA,NA,"stop","N1V T55L D112* R124T F160D",5
"lib2","SARS-CoV-2","TATCATTGTATCAGAT",5,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S Y50D V103N L125R",4
"lib2","SARS-CoV-2","TATCATTGTTTATACC",1,5.53,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","P54L L95Q A105W",3
"lib2","SARS-CoV-2","TATCATTTGCCCTACC",3,21.1,10.15,-0.68,0.12,2.56,1.07,0.01,">1 nonsynonymous","A33I A42L F47K T55D A105Y",5
"lib2","SARS-CoV-2","TATCCAAACAATTACG",5,1.76,NA,NA,NA,NA,NA,NA,"stop","D68V G86K Y93L G116* A145S N171I G196R",7
"lib2","SARS-CoV-2","TATCCAAACAGCGGAG",6,54.86,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y50R N120S P133Y Q176H",4
"lib2","SARS-CoV-2","TATCCAAAGATATTAT",9,4.15,NA,NA,NA,NA,NA,NA,"stop","I88* S139* T201D",3
"lib2","SARS-CoV-2","TATCCAAAGGGTAAAC",2,25.8,10.52,-0.31,0.05,2.77,1.26,0,">1 nonsynonymous","P7S P169K",2
"lib2","SARS-CoV-2","TATCCAAATAAGAATA",3,109.24,10.12,-0.71,0.05,2.61,1.04,0,">1 nonsynonymous","Y35S I104V N110M",3
"lib2","SARS-CoV-2","TATCCAAATATCGCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G P149I K199Y",3
"lib2","SARS-CoV-2","TATCCAAATGCAGGGG",14,107.25,6.34,-4.5,0.7,1.5,1.25,0.03,">1 nonsynonymous","S41W V77G",2
"lib2","SARS-CoV-2","TATCCAAATTCCAATG",5,8.99,NA,NA,NA,NA,NA,NA,"stop","F47* A105N L122T S129K",4
"lib2","SARS-CoV-2","TATCCAACTACCTGGG",1,6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13V V20W R78I G166A K198Q",5
"lib2","SARS-CoV-2","TATCCAAGAAAAATAT",6,30.07,10.2,-0.63,0.08,2.82,1.05,0,"1 nonsynonymous","R136A",1
"lib2","SARS-CoV-2","TATCCAATATCGGGGA",4,0.78,NA,NA,NA,NA,NA,NA,"stop","P7F Y21L D112Y K128*",4
"lib2","SARS-CoV-2","TATCCAATCAAGCCGT",17,139.6,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","Y50L C61W Y119F E141I V173S",5
"lib2","SARS-CoV-2","TATCCAATCTAATGCT",2,40.45,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37R S43I W106L Y119S G146A G152S",6
"lib2","SARS-CoV-2","TATCCAATCTGGACCC",2,58.82,9.32,-1.51,0.12,1.58,1.05,0.01,">1 nonsynonymous","N92G K128S",2
"lib2","SARS-CoV-2","TATCCAATTTACCAAG",3,13.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96K S129L A145R",3
"lib2","SARS-CoV-2","TATCCACAACAGGATG",11,140.2,9.1,-1.74,0.09,1.64,1.13,0,">1 nonsynonymous","R127H P133S",2
"lib2","SARS-CoV-2","TATCCACAGAAGAACT",3,22,9.75,-1.09,0.09,2.15,1,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","TATCCACCAATAGTCC",8,69.5,10.75,-0.09,0.06,2.91,1.1,0,"1 nonsynonymous","N1S",1
"lib2","SARS-CoV-2","TATCCACCAATTTTCA",1,2.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76T Y93R",2
"lib2","SARS-CoV-2","TATCCACCCTGCCTGA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C V182L",2
"lib2","SARS-CoV-2","TATCCACCTGCCTCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V N40L S147K",3
"lib2","SARS-CoV-2","TATCCACTACCTCTAC",1,13.71,6.18,-4.66,1.43,1.5,1.23,0.07,">1 nonsynonymous","N1Q G86L N92M",3
"lib2","SARS-CoV-2","TATCCACTAGTAAGAA",7,126.83,10.85,0.01,0.07,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCACTCACTGAAG",3,31.33,10.9,0.07,0.07,3,1.01,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","TATCCACTGACAAGCT",7,61.16,10.58,-0.25,0.04,2.86,1.07,0,">1 nonsynonymous","T46S N120L",2
"lib2","SARS-CoV-2","TATCCAGCCAAAAACT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","V103K L111N G117*",3
"lib2","SARS-CoV-2","TATCCAGGATTGAAAA",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40L T55V K114Q E141R",4
"lib2","SARS-CoV-2","TATCCAGGGTTAGGAC",4,0.65,NA,NA,NA,NA,NA,NA,"stop","S19* V37S Y50R N64M N110R Y123S G152T",7
"lib2","SARS-CoV-2","TATCCATACGAGACAT",2,196.09,10.19,-0.65,0.08,3,1.03,0,">1 nonsynonymous","K87A T140L",2
"lib2","SARS-CoV-2","TATCCATAGAATCAGG",4,154.57,10.86,0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCATATAAGCTGT",1,7.91,7.53,-3.31,0.26,1.5,1,0.01,">1 nonsynonymous","F8L Y50S N118S",3
"lib2","SARS-CoV-2","TATCCATATAGCAAAC",9,131.09,7.95,-2.89,0.18,1.5,1.12,0.01,">1 nonsynonymous","F12C N40E D97W",3
"lib2","SARS-CoV-2","TATCCATGGGAATGAC",5,50.58,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","L5N E76G S113M",3
"lib2","SARS-CoV-2","TATCCATTCTACACCT",12,125.58,10.8,-0.04,0.03,2.89,1.13,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","TATCCCAAAGTTAACC",1,6.47,10.93,0.09,0.1,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCCAAATGACTGA",1,1.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","TATCCCAACCACGTGA",6,19.05,6,-4.84,1.79,3,1.05,0,">1 nonsynonymous","Y35R V71W F99L G155W",4
"lib2","SARS-CoV-2","TATCCCAACGAACATA",1,53.18,10.89,0.06,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCCAATAATTCAA",7,25.3,7.26,-3.58,0.46,1.5,1.16,0.05,">1 nonsynonymous","D59G W106Y P133Q",3
"lib2","SARS-CoV-2","TATCCCACATAATTCC",7,58.98,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S29F C49V P133R Y165S",4
"lib2","SARS-CoV-2","TATCCCACCCGCCATG",12,54.76,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","F44V G51W Q84M N92L",4
"lib2","SARS-CoV-2","TATCCCACGTGTCCTT",4,39.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T46R Y91S Q144Y",3
"lib2","SARS-CoV-2","TATCCCCAATCGTAAC",4,31.19,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S45W D68R S113D R136L",4
"lib2","SARS-CoV-2","TATCCCCCATTTCACG",5,0.5,NA,NA,NA,NA,NA,NA,"stop","W23S L131F E141*",3
"lib2","SARS-CoV-2","TATCCCCCTACCAAAT",6,124.83,6,-4.84,0.86,1.5,1.1,0,">1 nonsynonymous","N40T C158I",2
"lib2","SARS-CoV-2","TATCCCCGATAGAACG",3,0.47,NA,NA,NA,NA,NA,NA,"stop","C6F T15R D34N Y50V V77K G83R D98N W106* E154T",9
"lib2","SARS-CoV-2","TATCCCCTGGCACAAG",10,199.69,10.65,-0.19,0.03,2.88,1.12,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","TATCCCCTGGTGAACC",2,129.82,8.72,-2.11,0.11,2.61,1.05,0,">1 nonsynonymous","D90T G166M",2
"lib2","SARS-CoV-2","TATCCCGACACACTCG",6,91.86,10.49,-0.35,0.02,2.92,1.05,0,">1 nonsynonymous","Y66M S184Y",2
"lib2","SARS-CoV-2","TATCCCGCTGAATCTT",3,44.26,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","A14T V37F K128G Y159S",4
"lib2","SARS-CoV-2","TATCCCGGAATATATT",3,31.14,10.8,-0.04,0.04,3,1.02,0,">1 nonsynonymous","G155K P197V",2
"lib2","SARS-CoV-2","TATCCCGTACACACGC",2,5.72,NA,NA,NA,NA,NA,NA,"stop","I2A T85M D90Y P96* N107C",5
"lib2","SARS-CoV-2","TATCCCGTATTTGTTT",2,17.28,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Q84I W106A Y123G",3
"lib2","SARS-CoV-2","TATCCCTACCAGACCA",6,45.6,7.87,-2.97,0.19,1.56,1.11,0.01,">1 nonsynonymous","V37G Y121G",2
"lib2","SARS-CoV-2","TATCCCTCTTGTGAGT",6,44.51,10.83,-0.01,0.06,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCGAACATTTACT",2,0.77,NA,NA,NA,NA,NA,NA,"stop","T55* Q84L G166V",3
"lib2","SARS-CoV-2","TATCCGACAATTTCGC",4,45.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K94L G101A",2
"lib2","SARS-CoV-2","TATCCGAGATCATAAC",13,148.96,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9V Y159G G174N",3
"lib2","SARS-CoV-2","TATCCGAGGATAACCC",1,12.01,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","P7K P54L L131D S139I",4
"lib2","SARS-CoV-2","TATCCGATCTAGATAC",3,97.21,8.19,-2.65,0.09,2.03,1.04,0,">1 nonsynonymous","F44A D59N D97C G152S F156T",5
"lib2","SARS-CoV-2","TATCCGATTACAGCAG",1,12.66,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V20N T63R F99Y",3
"lib2","SARS-CoV-2","TATCCGCATTATCTTT",8,39.98,6,-4.84,1.19,2.08,1.21,0.01,">1 nonsynonymous","K87F K94D N107G G117Y N151T S184M",6
"lib2","SARS-CoV-2","TATCCGCCAATATACA",2,44.26,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D59E N92R P161G Q176K",4
"lib2","SARS-CoV-2","TATCCGCTTTAACTAA",3,94.65,8.5,-2.34,0.13,1.5,1.1,0.01,">1 nonsynonymous","L60C A89R",2
"lib2","SARS-CoV-2","TATCCGGAAATTCTAA",1,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S C150L Y178I",3
"lib2","SARS-CoV-2","TATCCGGAATACTCGT",1,40.51,10.72,-0.12,0.05,2.98,1.01,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","TATCCGGATATATGCT",6,89.86,9.76,-1.08,0.07,2.03,1.06,0,"1 nonsynonymous","L38R",1
"lib2","SARS-CoV-2","TATCCGGGATTAATAA",6,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E D98L",2
"lib2","SARS-CoV-2","TATCCGGGTACTTGGA",6,21.06,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","S43I F70R I104S",3
"lib2","SARS-CoV-2","TATCCGGGTGTGTTCG",17,158.98,10.45,-0.39,0.04,2.92,1.06,0,">1 nonsynonymous","T3N F44D",2
"lib2","SARS-CoV-2","TATCCGGTAAATTTGC",2,37.89,10.12,-0.72,0.04,2.96,1.01,0,">1 nonsynonymous","V37C D59K G174S",3
"lib2","SARS-CoV-2","TATCCGGTACTAATGG",3,24,10.6,-0.24,0.07,2.92,1.07,0,">1 nonsynonymous","G9C S129G N171Y",3
"lib2","SARS-CoV-2","TATCCGGTTCGTGGGT",5,191.61,10.85,0.01,0.05,2.97,1.04,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","TATCCGTAGCTGAACC",1,38.88,9.34,-1.5,0.07,2.75,1.06,0,"1 nonsynonymous","G74Y",1
"lib2","SARS-CoV-2","TATCCGTCTACAGGAA",4,52.66,10.81,-0.03,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCCGTGTCTTTCAG",9,130.85,10.29,-0.55,0.04,2.87,1.1,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TATCCGTTATATGGGA",2,37.56,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G83C D90L N118S Y159D",4
"lib2","SARS-CoV-2","TATCCTAAAGACAAAG",20,5.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N4A A33S F160P",3
"lib2","SARS-CoV-2","TATCCTACGTTTCTCC",2,24.95,10.98,0.14,0.19,2.73,1.18,0.01,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","TATCCTAGCGAGTATC",8,127.36,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y21G S53L S129R Y178T",4
"lib2","SARS-CoV-2","TATCCTAGCTAAGACA",13,136.04,6,-4.84,1.35,1.5,1.19,0.02,">1 nonsynonymous","G51E S113M F160S T170S R179M C195T",6
"lib2","SARS-CoV-2","TATCCTAGGCTAACTA",6,160.79,8.21,-2.62,0.16,2.31,1.04,0.01,">1 nonsynonymous","V37S K128V Q144F G166V",4
"lib2","SARS-CoV-2","TATCCTAGTAACAATA",1,15.81,7.15,-3.69,0.42,1.5,1.18,0.03,">1 nonsynonymous","Y35P A105Y S139Y",3
"lib2","SARS-CoV-2","TATCCTATAAAGCCAA",2,43.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11C R27Q Y119C K132D A145S",5
"lib2","SARS-CoV-2","TATCCTATACCTGGAG",1,42.29,10.77,-0.07,0.03,3,1.02,0,">1 nonsynonymous","D59N Q168R T201N",3
"lib2","SARS-CoV-2","TATCCTATACGTCTCT",3,9.44,NA,NA,NA,NA,NA,NA,"stop","G83* L95P Q176*",3
"lib2","SARS-CoV-2","TATCCTATTTACCCTG",13,75.12,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12Y K26I V77S K114E F134I",5
"lib2","SARS-CoV-2","TATCCTCCCTTAAAGA",2,11,10.4,-0.43,0.17,2.74,1.22,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TATCCTGAAAACCAAA",1,26.16,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","P149Q C158R Q176K",3
"lib2","SARS-CoV-2","TATCCTGATATTGTTT",3,14.37,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","L5R N13I V65E R73W N107Y",5
"lib2","SARS-CoV-2","TATCCTGGAACGAACC",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63Y R127Y",2
"lib2","SARS-CoV-2","TATCCTGGCTACACCC",2,29.41,10.49,-0.35,0.08,2.96,1,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","TATCCTTATGAGCCAC",3,9.58,7.56,-3.27,0.22,1.85,1.21,0.02,">1 nonsynonymous","D34M V71I",2
"lib2","SARS-CoV-2","TATCCTTCATCCTCAG",10,116.01,9.86,-0.97,0.36,1.5,1,0.06,">1 nonsynonymous","S36Y G83P",2
"lib2","SARS-CoV-2","TATCCTTCCACTCACA",4,56.05,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T55L G172D R179F",3
"lib2","SARS-CoV-2","TATCCTTCCTTTACCA",4,56.93,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N13I V37R N107T",3
"lib2","SARS-CoV-2","TATCCTTTCTGTTACA",4,53.67,10.33,-0.51,0.07,2.82,1.11,0,">1 nonsynonymous","N120V P149T Q163S",3
"lib2","SARS-CoV-2","TATCGAAACACTTGTG",6,45.84,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L5V Q84A Y93P I142V T148S",5
"lib2","SARS-CoV-2","TATCGAAACGCACAAT",13,184.93,8.3,-2.54,0.14,1.84,1.06,0.01,">1 nonsynonymous","L38Y V65M G117Y",3
"lib2","SARS-CoV-2","TATCGAAACGTTATCT",9,24.24,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","N1V L38R K114R N157S L162Y A190I",6
"lib2","SARS-CoV-2","TATCGAACTTTGTACC",7,49.39,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V11G V37H F70V W106R Y143G",5
"lib2","SARS-CoV-2","TATCGAAGAAAGTCTA",2,32.73,9.97,-0.86,0.07,2.95,1,0,">1 nonsynonymous","T55S D98Y F126H",3
"lib2","SARS-CoV-2","TATCGAAGGACTACAC",10,145.55,10.65,-0.19,0.03,2.93,1.07,0,">1 nonsynonymous","I2R A42S K56T",3
"lib2","SARS-CoV-2","TATCGAAGGGCAAATC",6,38.18,9.87,-0.97,0.12,2.67,1,0.01,">1 nonsynonymous","C6I T100V T140K T148A",4
"lib2","SARS-CoV-2","TATCGAATAATTATCG",13,167.14,10.78,-0.05,0.04,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TATCGAATATATTAAC",1,26.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72L K114R V173T",3
"lib2","SARS-CoV-2","TATCGAATCCAACTTT",3,13.68,9.47,-1.37,0.15,2.54,1.06,0.01,">1 nonsynonymous","A42P Y66Q A145C",3
"lib2","SARS-CoV-2","TATCGACAATAGAACC",3,27.67,7.86,-2.97,0.18,1.5,1.12,0.01,">1 nonsynonymous","L60S N92G",2
"lib2","SARS-CoV-2","TATCGACACAAGATTT",2,24.67,6,-4.84,2,3,1.27,0.02,">1 nonsynonymous","D112S D137M P149S P177Y",4
"lib2","SARS-CoV-2","TATCGACATTATCCAA",12,60.34,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F70K T148E A192Q",3
"lib2","SARS-CoV-2","TATCGACCAACTTGAG",4,31.75,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P7N V103S P149L G152L",4
"lib2","SARS-CoV-2","TATCGACCAGAAGTAG",2,89.59,8.55,-2.28,0.12,2.64,1.18,0.01,">1 nonsynonymous","Y50W T85M N120P T170S",4
"lib2","SARS-CoV-2","TATCGACCATCACACT",4,55.09,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y121W C158G",2
"lib2","SARS-CoV-2","TATCGACCTGTGTATT",14,8.16,NA,NA,NA,NA,NA,NA,"stop","N130L P177L V182F S200*",4
"lib2","SARS-CoV-2","TATCGACGTTGATACA",5,12.18,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C49N G74T Y93P G155M",4
"lib2","SARS-CoV-2","TATCGAGAATAATATC",3,41.8,9.45,-1.39,0.14,2.04,1.02,0.01,">1 nonsynonymous","T15I N120L L125W",3
"lib2","SARS-CoV-2","TATCGAGCGGGCCTTA",6,0.64,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib2","SARS-CoV-2","TATCGAGGAGTAGTCT",1,15.96,9.76,-1.08,0.15,2.91,1.09,0.01,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","TATCGAGTAACAGCTG",3,60.88,6.64,-4.19,0.47,1.5,1.15,0.03,">1 nonsynonymous","A105T Y165K",2
"lib2","SARS-CoV-2","TATCGAGTTATTAGAA",4,9.21,7.11,-3.72,0.27,2.32,1.06,0.02,">1 nonsynonymous","L5H Q84M L125K G155V",4
"lib2","SARS-CoV-2","TATCGATAATGTGATA",5,113.56,10.83,0,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCGATAGCAGCCCA",1,31.15,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y66E I80A D97V",3
"lib2","SARS-CoV-2","TATCGCATCCAAGCAA",1,28.1,10.28,-0.55,0.05,2.96,1,0,">1 nonsynonymous","G9P K56L V77L",3
"lib2","SARS-CoV-2","TATCGCCATGCCTGGT",6,15.44,8.39,-2.44,0.22,2.27,1.08,0.03,">1 nonsynonymous","L5R T15R C49V",3
"lib2","SARS-CoV-2","TATCGCCCCAAACAAT",15,4.24,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","TATCGCCGAACTCGCG",6,81.58,8.19,-2.65,0.31,1.5,1,0.04,">1 nonsynonymous","D90T Y121T K128G",3
"lib2","SARS-CoV-2","TATCGCCGCGAAGCAA",10,105.13,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11I S19F V32T F99C",4
"lib2","SARS-CoV-2","TATCGCCTCGCTCTGA",5,22.9,8.08,-2.76,0.29,1.5,1.17,0.04,">1 nonsynonymous","F8L T15S S41T C49S C61V",5
"lib2","SARS-CoV-2","TATCGCGTATCAAATC",1,13.04,9.45,-1.38,0.11,2.88,1.06,0.01,">1 nonsynonymous","F156L Q168G",2
"lib2","SARS-CoV-2","TATCGCGTTAAGCTCC",3,0.05,NA,NA,NA,NA,NA,NA,"stop","W23P T100N K132* G172S",4
"lib2","SARS-CoV-2","TATCGCGTTATCAAAT",2,7.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G D34T V71G",3
"lib2","SARS-CoV-2","TATCGCGTTGGATTCC",16,385.07,8.55,-2.29,0.08,2.53,1.08,0,">1 nonsynonymous","R73A N107R",2
"lib2","SARS-CoV-2","TATCGCTAATCTTAGA",4,72.65,10.76,-0.08,0.04,2.92,1.08,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","TATCGCTTTAGAGTGT",9,32.87,9.69,-1.15,0.11,2.09,1.06,0,">1 nonsynonymous","N13H D34P Q168S",3
"lib2","SARS-CoV-2","TATCGGATTCCCAGAG",6,73.39,10.63,-0.2,0.04,3,1.02,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","TATCGGCAAAATATTT",8,39.65,7.13,-3.7,0.4,1.5,1.12,0.04,">1 nonsynonymous","P96Y S139T G174Q",3
"lib2","SARS-CoV-2","TATCGGCACGTTTGAA",8,114.94,10.82,-0.01,0.04,2.95,1.06,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","TATCGGCTTCATAAAA",3,9.69,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14Y G83C L95F",3
"lib2","SARS-CoV-2","TATCGGGAAAAGGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R V180E",2
"lib2","SARS-CoV-2","TATCGGGCGAATCATT",9,34.35,6,-4.84,0.96,2.39,1.18,0.01,">1 nonsynonymous","Y91G D97T L122T E135S",4
"lib2","SARS-CoV-2","TATCGGGCTAGTCAAG",2,109.72,10.27,-0.57,0.03,2.89,1.01,0,">1 nonsynonymous","A42V F185I",2
"lib2","SARS-CoV-2","TATCGGGGAGAAAAAT",7,86.59,10.54,-0.3,0.04,2.89,1.1,0,">1 nonsynonymous","G9D T15L D59R",3
"lib2","SARS-CoV-2","TATCGGGTTCATTTCC",5,27.54,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D75S A89L V115L T170P",4
"lib2","SARS-CoV-2","TATCGGTAAGCTTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","T85* L95G G146L",3
"lib2","SARS-CoV-2","TATCGGTCGTAAATTG",3,0.01,NA,NA,NA,NA,NA,NA,"stop","C6D Y91* Q163T G174Y",4
"lib2","SARS-CoV-2","TATCGTAAATAGTAAC",3,25.56,6,-4.84,1.19,3,1.16,0.01,">1 nonsynonymous","P96H G101I V182G",3
"lib2","SARS-CoV-2","TATCGTACCCTCTTAA",5,35.37,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K94V K114W E141S V173T",4
"lib2","SARS-CoV-2","TATCGTATACCAAATG",7,30.48,8.78,-2.05,0.06,2.24,1.05,0,">1 nonsynonymous","P7D A33N Y121S N171S",4
"lib2","SARS-CoV-2","TATCGTATGATATAAA",9,154.24,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","P7R W23E D34R G172K",4
"lib2","SARS-CoV-2","TATCGTCAAAAGGACG",5,112.42,9.09,-1.74,0.08,2.87,1.08,0,"1 nonsynonymous","G146K",1
"lib2","SARS-CoV-2","TATCGTCTCCAAATAA",2,5.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V D68W",2
"lib2","SARS-CoV-2","TATCGTTAAGAGGAAA",6,46.14,10.1,-0.73,0.06,2.81,1.05,0,">1 nonsynonymous","L38W Y121F",2
"lib2","SARS-CoV-2","TATCGTTGAAAATTAG",2,48.54,10.39,-0.45,0.03,2.85,1.09,0,">1 nonsynonymous","I2S N24E Y66W R136L",4
"lib2","SARS-CoV-2","TATCGTTTGATTAAGA",2,28.16,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A14E L57C I88D P96A N120L Q144F Y178F",7
"lib2","SARS-CoV-2","TATCTAAACACATACC",33,8.73,NA,NA,NA,NA,NA,NA,"stop","K26* Y35K D112T S139L",4
"lib2","SARS-CoV-2","TATCTAAACAGCTCCT",1,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55P C61S V103T",3
"lib2","SARS-CoV-2","TATCTAAACTATCATA",2,0.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V181H",1
"lib2","SARS-CoV-2","TATCTAAACTCCGTAC",9,52.17,8.12,-2.71,0.17,1.87,1.08,0.01,">1 nonsynonymous","T63S R73A Y91G",3
"lib2","SARS-CoV-2","TATCTAACAAGATAAT",1,55.24,10.52,-0.32,0.04,2.97,1.03,0,">1 nonsynonymous","A42T C61Y A190S",3
"lib2","SARS-CoV-2","TATCTAACATTAAACC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","T3* N40* V77L F126R S147F G166L V173Y",7
"lib2","SARS-CoV-2","TATCTAACCGACCAGA",16,310.31,6.42,-4.41,0.17,2.36,1.15,0,">1 nonsynonymous","F126S P169I P197K",3
"lib2","SARS-CoV-2","TATCTAACTAAGGGAT",8,96.71,8.42,-2.41,0.13,2.09,1.07,0.01,">1 nonsynonymous","R27S Y66E Q84S K128A G166C",5
"lib2","SARS-CoV-2","TATCTAATAGAACCAT",3,21.75,10.82,-0.01,0.08,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TATCTAATATGTATAG",11,79.31,6.59,-4.25,0.24,1.5,1.15,0.01,">1 nonsynonymous","A33T C158H",2
"lib2","SARS-CoV-2","TATCTAATATTCGAAT",1,20.61,9.87,-0.96,0.08,2.84,1.08,0,">1 nonsynonymous","C6Y V37I C61G",3
"lib2","SARS-CoV-2","TATCTAATCCAATCAG",8,98,10.01,-0.82,0.07,2.57,1.04,0,">1 nonsynonymous","N107R Y123K",2
"lib2","SARS-CoV-2","TATCTAATGATAAACC",3,0.04,NA,NA,NA,NA,NA,NA,"stop","V52T I80M Q84H T100G S129*",5
"lib2","SARS-CoV-2","TATCTAATGGCGGAGC",7,98.39,10.8,-0.04,0.05,2.91,1.1,0,"1 nonsynonymous","N64V",1
"lib2","SARS-CoV-2","TATCTAATTTCATCAC",12,251.64,10.76,-0.08,0.03,2.97,1.03,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","TATCTACACAAAAGAA",5,3.51,NA,NA,NA,NA,NA,NA,"stop","C6S A14* F44N V65A Q84V",5
"lib2","SARS-CoV-2","TATCTACAGGGGACTG",3,31.71,10.32,-0.52,0.07,2.94,1,0,">1 nonsynonymous","I142F G152S",2
"lib2","SARS-CoV-2","TATCTACAGTCAACTT",7,102.8,10.71,-0.12,0.04,2.94,1.09,0,"1 nonsynonymous","V153S",1
"lib2","SARS-CoV-2","TATCTACCTCTAAGGT",1,6.94,6,-4.84,2,3,1.03,0,"1 nonsynonymous","R179L",1
"lib2","SARS-CoV-2","TATCTACGTACATAAA",8,40.66,9.13,-1.71,0.26,1.5,1.02,0.04,">1 nonsynonymous","T85V P96I K199I",3
"lib2","SARS-CoV-2","TATCTACTTAACTGCA",9,40.33,6.79,-4.05,0.39,1.5,1.18,0.02,">1 nonsynonymous","D34K K48S T148V G152R G174W",5
"lib2","SARS-CoV-2","TATCTAGAAGAATATT",10,24.77,6.24,-4.6,0.89,1.5,1.18,0.03,">1 nonsynonymous","N4A A14S T85E I104N",4
"lib2","SARS-CoV-2","TATCTAGAAGTCAAGG",1,17.44,10.74,-0.09,0.06,2.86,1.16,0,">1 nonsynonymous","T55F T201R",2
"lib2","SARS-CoV-2","TATCTAGACCTCATGT",5,18.82,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","K56S I88F N130A E135R C158G T201M",6
"lib2","SARS-CoV-2","TATCTAGACGTATACA",3,55.77,10.39,-0.45,0.04,2.96,1.04,0,">1 nonsynonymous","I2L Y178V",2
"lib2","SARS-CoV-2","TATCTAGATAGTGCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y T15A C61R I104H",4
"lib2","SARS-CoV-2","TATCTAGCACACAAAT",7,32.13,7.05,-3.78,0.22,1.5,1.12,0.01,">1 nonsynonymous","C49Y A89E Y119I L125P P169I",5
"lib2","SARS-CoV-2","TATCTAGCATAATTGT",13,211.59,10.36,-0.47,0.03,2.84,1.05,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","TATCTAGCGCGCACTT",11,56.81,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D112N G155W G174W",3
"lib2","SARS-CoV-2","TATCTAGCTCTAGAAT",5,62.06,10.77,-0.07,0.05,2.99,1,0,">1 nonsynonymous","N4I I104F L122W N130A F160S",5
"lib2","SARS-CoV-2","TATCTAGCTGAGGCAC",9,91.65,10.64,-0.19,0.04,2.96,1.04,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","TATCTATAAGAAACCT",4,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6F F17L K128C V181W",4
"lib2","SARS-CoV-2","TATCTATACTCCACTA",2,47.16,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6A D97S L122E E154F P161H",5
"lib2","SARS-CoV-2","TATCTATATAAGCTCT",3,47.36,6,-4.84,2,3,1.17,0,">1 nonsynonymous","I2M V11N A145S G146A F167S",5
"lib2","SARS-CoV-2","TATCTATATAGATAGA",1,45.21,10.85,0.02,0.06,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTATCTCCAACGG",1,10.44,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","A22S Y35I N157Q N171P",4
"lib2","SARS-CoV-2","TATCTATGAAAACATA",2,44.67,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","V32P W106D",2
"lib2","SARS-CoV-2","TATCTATGCACACAAC",10,152.93,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A22S G51F T140L G152P V153L Y175R Y178Q K198V",8
"lib2","SARS-CoV-2","TATCTATGCATGATAT",6,2.03,NA,NA,NA,NA,NA,NA,"stop","I28* S36* F70V",3
"lib2","SARS-CoV-2","TATCTATGGCGGTACA",11,155.57,9.09,-1.75,0.05,2.91,1.09,0,">1 nonsynonymous","L57C L125T",2
"lib2","SARS-CoV-2","TATCTATTGCTCCAAT",2,40.92,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N1F R16L N92D T201L",4
"lib2","SARS-CoV-2","TATCTATTTATTCCAC",4,37.91,10.05,-0.79,0.14,2.41,1.06,0.01,">1 nonsynonymous","N1C L57S",2
"lib2","SARS-CoV-2","TATCTCAACAACATAC",3,1.56,NA,NA,NA,NA,NA,NA,"stop","L57C N118*",2
"lib2","SARS-CoV-2","TATCTCAAGTGACGAA",2,7.4,10,-0.83,0.15,2.28,1,0.02,">1 nonsynonymous","T3F V32L K132F T148L",4
"lib2","SARS-CoV-2","TATCTCACATAACGCA",1,11.97,6,-4.84,1.34,3,1.16,0.01,">1 nonsynonymous","C6I P82E K128S E135R G152F R179D",6
"lib2","SARS-CoV-2","TATCTCAGAAGGTATA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","TATCTCATAATGAACT",1,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D D90T P96R D112L",4
"lib2","SARS-CoV-2","TATCTCATAGTAATGG",4,55.89,8.25,-2.58,0.11,2.14,1.09,0,">1 nonsynonymous","T63H N107G F156G",3
"lib2","SARS-CoV-2","TATCTCATCGCTTTTA",3,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P A89H A105K P133G",4
"lib2","SARS-CoV-2","TATCTCATTAGCATAA",1,7.66,10.78,-0.06,0.01,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTCCATTAACACG",2,0.67,NA,NA,NA,NA,NA,NA,"stop","I28P L38K K48* A67H",4
"lib2","SARS-CoV-2","TATCTCCCATATCAGG",11,51.44,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","L95W",1
"lib2","SARS-CoV-2","TATCTCCGCTTGTGAC",2,111.02,10.8,-0.03,0.05,2.95,1.08,0,"1 nonsynonymous","D59Q",1
"lib2","SARS-CoV-2","TATCTCCGTCAAACGG",7,26.38,7.48,-3.35,0.48,1.5,1.06,0.07,">1 nonsynonymous","F8C V77R S108H T140C",4
"lib2","SARS-CoV-2","TATCTCCTTAGTCGTG",1,33.08,10.9,0.06,0.05,3,1.01,0,"1 nonsynonymous","P197A",1
"lib2","SARS-CoV-2","TATCTCGATGGAAATG",4,11.57,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","G86R K128V",2
"lib2","SARS-CoV-2","TATCTCGTATAAGCCA",2,57.31,10.85,0.01,0.05,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTCGTTGCAAAAG",1,16.98,10.87,0.03,0.07,2.97,1,0,"synonymous","",0
"lib2","SARS-CoV-2","TATCTCTAGTTTCGCC",15,103.71,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y50H I88E D97Q Y175V",4
"lib2","SARS-CoV-2","TATCTCTATCAACGGT",2,12.44,6,-4.84,1.58,3,1.15,0.02,">1 nonsynonymous","A42F P82L D97L F185I P197E",5
"lib2","SARS-CoV-2","TATCTCTCAATCTCTT",1,9.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19W L95V A105Y V115H S139N",5
"lib2","SARS-CoV-2","TATCTCTCGATTAACT",4,12.29,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","R27G C61G I80C T100S N157P G174V",6
"lib2","SARS-CoV-2","TATCTCTGCGTTGGTT",3,30.95,8.65,-2.18,0.14,2.94,1.04,0.01,">1 nonsynonymous","N58S A145D V153L",3
"lib2","SARS-CoV-2","TATCTCTGGAAATACA",2,109.48,8.94,-1.9,0.05,2.54,1.05,0,">1 nonsynonymous","N4G K87H N107V N120D",4
"lib2","SARS-CoV-2","TATCTGAAAATGGAAC",7,19.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10S D98K W106K S129V",4
"lib2","SARS-CoV-2","TATCTGAACGATAACG",5,67.93,10.69,-0.14,0.04,2.93,1.04,0,">1 nonsynonymous","A42S E141V",2
"lib2","SARS-CoV-2","TATCTGACGAACCAAC",3,13.06,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N92K V103Y",2
"lib2","SARS-CoV-2","TATCTGAGAGAGATAC",2,21.49,9.89,-0.95,0.07,2.87,1.11,0,">1 nonsynonymous","G83H E154L",2
"lib2","SARS-CoV-2","TATCTGATAAAGCATG",3,10.56,10.25,-0.59,0.09,2.92,1.12,0,">1 nonsynonymous","A42G T140V G174M",3
"lib2","SARS-CoV-2","TATCTGATACAGACAA",2,6.34,10.77,-0.07,0.07,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTGCATATCCTTC",7,103.51,6.3,-4.54,0.57,1.5,1.19,0.02,">1 nonsynonymous","N13Q N171K",2
"lib2","SARS-CoV-2","TATCTGCCTTACCGTG",4,79.23,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2K A18L T85L L95D",4
"lib2","SARS-CoV-2","TATCTGCTACTTCCCT",3,36.36,10.81,-0.02,0.04,2.94,1.09,0,"1 nonsynonymous","S129M",1
"lib2","SARS-CoV-2","TATCTGCTCCAGTTAA",6,49.12,6,-4.83,0.48,3,1.24,0.01,"1 nonsynonymous","D137P",1
"lib2","SARS-CoV-2","TATCTGCTGAACTATC",1,12.77,6.9,-3.93,0.43,1.5,1.04,0.03,">1 nonsynonymous","S36I L162S",2
"lib2","SARS-CoV-2","TATCTGGAAAACTGAA",11,27.24,6,-4.84,1.97,3,1.24,0,">1 nonsynonymous","V37G P169Y P177I E186F",4
"lib2","SARS-CoV-2","TATCTGGGTTTCGCCT",5,46.97,9.65,-1.18,0.15,1.78,1.09,0.01,">1 nonsynonymous","I2V S129P V180L",3
"lib2","SARS-CoV-2","TATCTGGTTACATTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6T W106* S147N G174R",4
"lib2","SARS-CoV-2","TATCTGTATACAAGCA",3,37.2,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L60S T85A L131Y E141D T170V Y178I",6
"lib2","SARS-CoV-2","TATCTGTCATATCTAC",5,50.72,10.52,-0.31,0.1,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTGTGATTATAGT",5,28.36,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N40F V71Y D90I N171H",4
"lib2","SARS-CoV-2","TATCTGTGCGCGGATC",3,0,NA,NA,NA,NA,NA,NA,"stop","E10R S41G V103*",3
"lib2","SARS-CoV-2","TATCTGTGGCATGATT",12,652.86,9.9,-0.93,0.05,2.29,1.02,0,"1 nonsynonymous","A14F",1
"lib2","SARS-CoV-2","TATCTTAAAATCTATG",7,29.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5N F44V G74D A81V",4
"lib2","SARS-CoV-2","TATCTTAAATAAATAG",7,59.37,10.26,-0.57,0.05,2.73,1.07,0,">1 nonsynonymous","T15R F47W D97E",3
"lib2","SARS-CoV-2","TATCTTAACAATCATA",17,149.61,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","T55S A81R N92K N107R Y165G",5
"lib2","SARS-CoV-2","TATCTTAACCAGTTCA",3,76.4,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","T55H F99R",2
"lib2","SARS-CoV-2","TATCTTAACCGTCTTA",3,38.1,9.61,-1.23,0.12,2.01,1.05,0.01,">1 nonsynonymous","L5G A18T K26Q G83D",4
"lib2","SARS-CoV-2","TATCTTAACCTACAAT",3,20.92,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","V20S A33G Y66P Y121L",4
"lib2","SARS-CoV-2","TATCTTAAGATATTTT",6,28.65,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","I2L N92S I138S F160V P169F P191T",6
"lib2","SARS-CoV-2","TATCTTAAGTTTGCAT",1,16.41,10.73,-0.11,0.07,2.92,1.1,0,"1 nonsynonymous","T140Y",1
"lib2","SARS-CoV-2","TATCTTAATATGAAGA",10,159.4,10.39,-0.45,0.02,2.85,1.06,0,">1 nonsynonymous","A105V V173K",2
"lib2","SARS-CoV-2","TATCTTACACGCTGGT",1,2.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65F I88K",2
"lib2","SARS-CoV-2","TATCTTAGAATAATAT",1,37.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L122D R127F N171I",3
"lib2","SARS-CoV-2","TATCTTATCGCAGTCT",6,79.62,10,-0.84,0.08,2.59,1.03,0,">1 nonsynonymous","C61D D90T P133A",3
"lib2","SARS-CoV-2","TATCTTATTTTTATCA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S P82V V103L",3
"lib2","SARS-CoV-2","TATCTTCAAAACCACT",2,24.12,7.85,-2.99,0.23,1.71,1.08,0.02,">1 nonsynonymous","V37R D112H",2
"lib2","SARS-CoV-2","TATCTTCCCCTTGAAT",4,70.33,10.85,0.02,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TATCTTCCTGAATTCT",1,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14G Y91Q",2
"lib2","SARS-CoV-2","TATCTTGACTACGTTA",4,35.5,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N58P K87F Y93K P133R",4
"lib2","SARS-CoV-2","TATCTTGGACCATAAC",2,19.7,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","P54L D97F W106F D112L",4
"lib2","SARS-CoV-2","TATCTTTAACCCTAAC",1,66.32,7.66,-3.18,0.14,1.5,1.07,0.01,">1 nonsynonymous","S164L N171P",2
"lib2","SARS-CoV-2","TATCTTTAACCTCGGA",1,1.61,NA,NA,NA,NA,NA,NA,"stop","C49R N64T C102P K199*",4
"lib2","SARS-CoV-2","TATCTTTAATACAAGA",13,118.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14S S45Y G101L T148H",4
"lib2","SARS-CoV-2","TATCTTTCACAGCTGG",3,34.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23T Q84Y V103L Y178S",4
"lib2","SARS-CoV-2","TATCTTTCGGGGAATT",13,76.43,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T3F R73Q P161M",3
"lib2","SARS-CoV-2","TATCTTTGAATACTTA",6,62.67,10.49,-0.35,0.04,2.88,1.1,0,"1 nonsynonymous","K87V",1
"lib2","SARS-CoV-2","TATCTTTTAGTTACGA",2,39.68,10.33,-0.51,0.04,2.83,1.03,0,">1 nonsynonymous","S45Y T100N",2
"lib2","SARS-CoV-2","TATCTTTTCCAGTGGG",16,120.76,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23G N110F N118S",3
"lib2","SARS-CoV-2","TATCTTTTTGGTATTC",1,15.42,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","N40M V71R G83H A105D G172R",5
"lib2","SARS-CoV-2","TATGAAAACGATTCAA",21,141.83,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35N N157I G166W",3
"lib2","SARS-CoV-2","TATGAAAACGGCCAAT",2,17.18,9.94,-0.9,0.12,2.57,1.11,0.01,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","TATGAAAAGCGAGGTT",1,10.59,9.85,-0.99,0.17,2.02,1.16,0.01,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TATGAAAAGCTACCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","T46* T140S",2
"lib2","SARS-CoV-2","TATGAAAAGGTATAGT",1,0.46,NA,NA,NA,NA,NA,NA,"stop","N118S S129K C150*",3
"lib2","SARS-CoV-2","TATGAAAATACACTAA",2,27.79,9.59,-1.24,0.11,2.16,1.05,0.01,"1 nonsynonymous","Y50V",1
"lib2","SARS-CoV-2","TATGAAAATCTATAGC",1,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16H F167L",2
"lib2","SARS-CoV-2","TATGAAAATGCTACAG",2,32.63,10.66,-0.18,0.05,2.84,1.17,0,"1 nonsynonymous","C61E",1
"lib2","SARS-CoV-2","TATGAAACCATTATCG",8,29.99,6.07,-4.76,0.97,1.5,1.25,0.02,">1 nonsynonymous","S19K N40Y P54L C61V",4
"lib2","SARS-CoV-2","TATGAAACGTGCCCGG",10,3.18,NA,NA,NA,NA,NA,NA,"stop","V11G R25F N64F D97H I104* G166*",6
"lib2","SARS-CoV-2","TATGAAAGAGTAAAGT",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C L38F",2
"lib2","SARS-CoV-2","TATGAAAGGATATTAT",6,0.48,NA,NA,NA,NA,NA,NA,"stop","A18M G74L D90E Y121S N130* Q168A P197V",7
"lib2","SARS-CoV-2","TATGAAAGTTAAAAGA",4,35.84,10.62,-0.22,0.06,2.91,1.02,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","TATGAAATATCGATCT",18,186.68,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","S36G V180S K199P",3
"lib2","SARS-CoV-2","TATGAAATTTATTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V37L G83*",2
"lib2","SARS-CoV-2","TATGAACAAAGTGACT",5,47.59,9.15,-1.69,0.09,2.68,1.14,0,">1 nonsynonymous","S129R Q144Y G152R",3
"lib2","SARS-CoV-2","TATGAACATTCATTGA",8,59.02,6.03,-4.8,0.73,1.5,1.13,0.02,">1 nonsynonymous","D59C E135Q Y143R",3
"lib2","SARS-CoV-2","TATGAACCCAACCACA",5,58.45,8.57,-2.27,0.26,1.5,1,0.03,">1 nonsynonymous","L5H D68M D112I F126Y",4
"lib2","SARS-CoV-2","TATGAACCTGCGACCC",4,71.23,10.16,-0.68,0.08,2.76,1.05,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","TATGAACGTTTGGTCG",1,17.29,6.75,-4.09,0.63,1.91,1.24,0.05,">1 nonsynonymous","E10S Y143K",2
"lib2","SARS-CoV-2","TATGAACTACCATGCC",1,0.56,NA,NA,NA,NA,NA,NA,"stop","T15* F62E T100H P169T V173C",5
"lib2","SARS-CoV-2","TATGAAGATTCCAGAA",1,8.19,6,-4.84,1.2,2.04,1.12,0.01,">1 nonsynonymous","R27K A105N G116L V181I",4
"lib2","SARS-CoV-2","TATGAAGCCAACAATT",4,42.56,10.52,-0.31,0.06,3,1,0,"1 nonsynonymous","G174M",1
"lib2","SARS-CoV-2","TATGAAGCGCTCGATA",2,11.75,6,-4.84,2,1.5,1,0,">1 nonsynonymous","N64H I80S Y119A",3
"lib2","SARS-CoV-2","TATGAAGTCAGTTGAT",7,101.76,9.39,-1.45,0.07,2.72,1.11,0,">1 nonsynonymous","K114G N120C",2
"lib2","SARS-CoV-2","TATGAAGTCTTAAATC",7,152.32,10.69,-0.15,0.05,2.85,1.14,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TATGAAGTGAACTTAT",4,36.42,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G83D I88V G116P R179N",4
"lib2","SARS-CoV-2","TATGAATAAACAGAAA",4,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A G86Y",2
"lib2","SARS-CoV-2","TATGAATAAGTTTCTG",6,23.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T15E K48L F70S P82T D90M",5
"lib2","SARS-CoV-2","TATGAATCCGAAATAA",6,337.29,6.43,-4.41,0.48,1.5,1.16,0.02,">1 nonsynonymous","T63F E141D Q176V",3
"lib2","SARS-CoV-2","TATGAATGTTAATTTT",1,9.1,8.86,-1.98,0.22,1.5,1.08,0.03,">1 nonsynonymous","C61Y P133S V181L",3
"lib2","SARS-CoV-2","TATGAATTAAAGCCCA",5,0.45,NA,NA,NA,NA,NA,NA,"stop","N1* L57* Q79M N171K",4
"lib2","SARS-CoV-2","TATGAATTACAGCGAA",1,12.53,6,-4.84,2,3,1.02,0,">1 nonsynonymous","G51V S69M Y165R",3
"lib2","SARS-CoV-2","TATGAATTAGGCTATA",14,34.57,8.95,-1.89,0.36,1.5,1,0.05,">1 nonsynonymous","V20L D97W",2
"lib2","SARS-CoV-2","TATGAATTATTAATAC",6,79.72,10.85,0.02,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGAATTGTTGCGAA",4,57.78,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V37H L95K",2
"lib2","SARS-CoV-2","TATGAATTTATGGTCG",3,65.63,6.84,-4,0.22,1.67,1.08,0.01,"1 nonsynonymous","C150I",1
"lib2","SARS-CoV-2","TATGACAAAAAATAAC",4,77.41,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I72Q H189L",2
"lib2","SARS-CoV-2","TATGACAACCCGTGTT",2,15.73,9.94,-0.89,0.1,2.27,1.04,0,">1 nonsynonymous","L5R Y93F Q144S",3
"lib2","SARS-CoV-2","TATGACAAGCCACAAA",3,36.6,10.3,-0.54,0.06,2.88,1.03,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","TATGACAAGGAATTAG",2,13.12,8.52,-2.32,0.37,1.5,1,0.04,">1 nonsynonymous","S41R S45Y E141L G155L",4
"lib2","SARS-CoV-2","TATGACAAGGTAACTT",3,12.32,8.39,-2.44,0.21,2.09,1.16,0.01,">1 nonsynonymous","L162T G174H",2
"lib2","SARS-CoV-2","TATGACAATAATCTTC",6,55.73,10.73,-0.11,0.05,2.96,1.04,0,">1 nonsynonymous","G51R T148S",2
"lib2","SARS-CoV-2","TATGACAATGCAAGGA",1,5.46,10.75,-0.09,0.11,2.98,1.04,0.01,"1 nonsynonymous","V173L",1
"lib2","SARS-CoV-2","TATGACACTACATAAT",9,2.26,NA,NA,NA,NA,NA,NA,"stop","N13I S45T V103R N157V P197*",5
"lib2","SARS-CoV-2","TATGACACTTTTTTTT",7,207.56,9.8,-1.03,0.06,2.13,1.04,0,"1 nonsynonymous","L38E",1
"lib2","SARS-CoV-2","TATGACAGAATTCAAA",5,147.02,8.93,-1.9,0.07,2.39,1.08,0,">1 nonsynonymous","L5N F44N L57C A190E",4
"lib2","SARS-CoV-2","TATGACAGGCGACCAT",7,56.41,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G9W K94H C150S S164V",4
"lib2","SARS-CoV-2","TATGACAGTGCTTGGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L A67F P161M",3
"lib2","SARS-CoV-2","TATGACCAACGAATTC",15,262.56,8.19,-2.64,0.11,2.03,1.09,0,">1 nonsynonymous","A18P N58M S113K P149V",4
"lib2","SARS-CoV-2","TATGACCAAGAGAGAC",1,25.07,10.52,-0.32,0.05,2.98,1.05,0,">1 nonsynonymous","K87T T201C",2
"lib2","SARS-CoV-2","TATGACCCATTAACAC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","E141*",1
"lib2","SARS-CoV-2","TATGACCCGCCCAAGC",4,31.24,9.36,-1.48,0.13,1.95,1.11,0.01,">1 nonsynonymous","C61S A105Q",2
"lib2","SARS-CoV-2","TATGACCTATTATTGC",3,52.97,6,-4.84,2,3,1.24,0,">1 nonsynonymous","F47L I80E L188K",3
"lib2","SARS-CoV-2","TATGACCTGACCCCAA",2,94.16,9.55,-1.29,0.06,2.82,1.05,0,">1 nonsynonymous","T3V A89S G174T",3
"lib2","SARS-CoV-2","TATGACCTTGGGTTGC",5,102.45,10.81,-0.03,0.05,2.83,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TATGACGAAAGAATAG",5,23.34,10.6,-0.24,0.03,3,1.01,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","TATGACGACTTTCATG",4,38.47,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S43N F126D Q168G",3
"lib2","SARS-CoV-2","TATGACGCAAAACTGA",11,145.06,10.79,-0.05,0.05,2.93,1.08,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TATGACGTATGTTATA",8,116.86,8.38,-2.46,0.12,2.3,1.15,0.01,"1 nonsynonymous","D112T",1
"lib2","SARS-CoV-2","TATGACGTGAAACCAG",2,11.14,6.51,-4.33,0.83,1.5,1,0.07,">1 nonsynonymous","C6R S41F G101Y G117L",4
"lib2","SARS-CoV-2","TATGACTCCTAACTAT",7,26.97,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","I104S C158G A190S",3
"lib2","SARS-CoV-2","TATGACTTATATGTTC",2,56.73,10.81,-0.03,0.05,2.92,1.07,0,">1 nonsynonymous","S29E N130R A190Y",3
"lib2","SARS-CoV-2","TATGAGAAAAGATTTG",3,25.49,6.33,-4.5,0.39,1.5,1.07,0.01,">1 nonsynonymous","L5C S29I R136N T170R",4
"lib2","SARS-CoV-2","TATGAGAACAGGTTGT",4,16.07,10.43,-0.41,0.07,3,1,0,">1 nonsynonymous","K87S S129R",2
"lib2","SARS-CoV-2","TATGAGAAGGACTATG",7,134.24,10.79,-0.05,0.04,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGAGAAGTCGTAAT",8,72.12,10.66,-0.17,0.05,2.9,1.1,0,"1 nonsynonymous","N151V",1
"lib2","SARS-CoV-2","TATGAGAATACGAATT",1,108.71,10.3,-0.53,0.04,2.95,1,0,">1 nonsynonymous","T15A G146A",2
"lib2","SARS-CoV-2","TATGAGACCCAACATG",3,16.4,6,-4.84,2,3,1.06,0,">1 nonsynonymous","G9N A89D N107G G174M G196R",5
"lib2","SARS-CoV-2","TATGAGAGAATAACAG",2,60.75,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17R R25S A33Q P82L",4
"lib2","SARS-CoV-2","TATGAGAGAGACCAGT",10,6.03,NA,NA,NA,NA,NA,NA,"stop","A67V Y91L G155* Y178I",4
"lib2","SARS-CoV-2","TATGAGAGCTCATGAT",6,53.77,8.5,-2.34,0.14,1.5,1.06,0.01,">1 nonsynonymous","Y35S L183W",2
"lib2","SARS-CoV-2","TATGAGAGCTCTCGAA",6,3.07,NA,NA,NA,NA,NA,NA,"stop","D90* F99Y N118Y T201D",4
"lib2","SARS-CoV-2","TATGAGATTATATGCC",3,0.26,NA,NA,NA,NA,NA,NA,"stop","W23G N40Y P54Q N64D K87G L122* P149D",7
"lib2","SARS-CoV-2","TATGAGATTCAAGCCA",2,7.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A22L A42P T85L L183G",4
"lib2","SARS-CoV-2","TATGAGCAACTCCCTA",3,33.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26S Q84I A105N",3
"lib2","SARS-CoV-2","TATGAGCAATTGGGTC",7,88.82,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8D C61P D68L G116H R124V Y159P",6
"lib2","SARS-CoV-2","TATGAGCACATTATAA",2,68.27,10.78,-0.05,0.03,3,1.01,0,"1 nonsynonymous","P7R",1
"lib2","SARS-CoV-2","TATGAGCACCCAATAT",11,16.43,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T3M W23T D34N C49K",4
"lib2","SARS-CoV-2","TATGAGCCACAACCTG",1,5.08,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","C6S S36K G51N S69L N107Y R136C",6
"lib2","SARS-CoV-2","TATGAGCCCGTTACCT",7,4.05,NA,NA,NA,NA,NA,NA,"stop","I72*",1
"lib2","SARS-CoV-2","TATGAGCGCCTTACTG",1,44.58,10.79,-0.05,0.05,2.9,1.11,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","TATGAGCTAAATTAGC",7,80.68,10.64,-0.2,0.03,2.86,1.05,0,"1 nonsynonymous","E135H",1
"lib2","SARS-CoV-2","TATGAGCTTGAACAAA",5,0.18,NA,NA,NA,NA,NA,NA,"stop","Y21F Y35* L60T K114S L122E",5
"lib2","SARS-CoV-2","TATGAGGAAACTCGGC",5,73.25,10.38,-0.46,0.06,2.78,1.06,0,">1 nonsynonymous","F62E N151Y",2
"lib2","SARS-CoV-2","TATGAGGGCACACTAA",2,1.3,NA,NA,NA,NA,NA,NA,"stop","F17L S29* F47V Y119A L187Y",5
"lib2","SARS-CoV-2","TATGAGGGCGCACATT",3,15.46,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","T55R D68P Y121T",3
"lib2","SARS-CoV-2","TATGAGTAACCATATA",2,103.44,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I2V V32R N120V G155A Q176W",5
"lib2","SARS-CoV-2","TATGAGTACGAATCAT",13,229.08,10.09,-0.74,0.04,2.76,1.07,0,">1 nonsynonymous","A14G C61R D75N",3
"lib2","SARS-CoV-2","TATGAGTAGGTATAGT",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42H C49N T63Y P82M G86R Y123L",6
"lib2","SARS-CoV-2","TATGAGTTAAGACGCA",1,5.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19P C150S",2
"lib2","SARS-CoV-2","TATGAGTTCTAGTCGT",7,25.36,10,-0.83,0.12,2.55,1.08,0.01,">1 nonsynonymous","S36Y D59V",2
"lib2","SARS-CoV-2","TATGAGTTTCATATCA",3,24.25,10.88,0.04,0.08,2.83,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","TATGATAAATTCCGCG",8,136.36,10.07,-0.77,0.06,2.86,1.02,0,"1 nonsynonymous","N107R",1
"lib2","SARS-CoV-2","TATGATAAGATGAGAA",8,39.44,10.35,-0.49,0.32,1.63,1.15,0.06,">1 nonsynonymous","F47S Q84S L122G R179M A192V",5
"lib2","SARS-CoV-2","TATGATACCGAAAAAC",4,83.89,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y39P D112I N118K V173H",4
"lib2","SARS-CoV-2","TATGATACCGTACTGT",7,96.24,8.23,-2.6,0.13,2.6,1.11,0.01,">1 nonsynonymous","N130K Y143D",2
"lib2","SARS-CoV-2","TATGATACCTCACCCT",2,4.46,NA,NA,NA,NA,NA,NA,"stop","F62I G172* G174*",3
"lib2","SARS-CoV-2","TATGATACGATATTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49F L60N D90A G116I N120L G166S",6
"lib2","SARS-CoV-2","TATGATATCAACGCCA",13,0.89,NA,NA,NA,NA,NA,NA,"stop","C61V D98E D137Y P149N N171R T201*",6
"lib2","SARS-CoV-2","TATGATATGACACTTA",5,110.49,10.48,-0.36,0.04,3,1.01,0,"1 nonsynonymous","N58I",1
"lib2","SARS-CoV-2","TATGATATTGAGCTGA",2,62.88,10.8,-0.03,0.03,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGATCAGCTCGATG",7,18.58,6,-4.84,1.71,2.77,1.11,0.01,">1 nonsynonymous","I104C E141P C158A V173A",4
"lib2","SARS-CoV-2","TATGATCATCTCACGG",7,33.75,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L5Y F44T I72K F99I I138P",5
"lib2","SARS-CoV-2","TATGATCATTGAAAAA",15,117.5,6,-4.84,0.89,1.5,1.2,0.01,">1 nonsynonymous","K26Q R179W",2
"lib2","SARS-CoV-2","TATGATCCATCGCCCA",3,52.13,8.37,-2.47,0.08,2.43,1.05,0,">1 nonsynonymous","L5V Y35V K114P N151V",4
"lib2","SARS-CoV-2","TATGATCCATGTCGGC",2,3.62,NA,NA,NA,NA,NA,NA,"stop","I2P R27I V103S K128*",4
"lib2","SARS-CoV-2","TATGATCCCTGCCAAC",16,398.58,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F12K Q84P K94N Q176G",4
"lib2","SARS-CoV-2","TATGATCGTCCCAGCT",3,61.73,9.66,-1.18,0.08,2.52,1.09,0,">1 nonsynonymous","G9P V115L R136M",3
"lib2","SARS-CoV-2","TATGATCTAAGTAAAT",3,0.82,NA,NA,NA,NA,NA,NA,"stop","L131K G146*",2
"lib2","SARS-CoV-2","TATGATCTCTTAACAT",1,16.12,10.04,-0.8,0.15,2.33,1,0.01,"1 nonsynonymous","S19K",1
"lib2","SARS-CoV-2","TATGATGAAAAACTCT",9,19.28,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","V20L D34H C61T A89T G174M",5
"lib2","SARS-CoV-2","TATGATGACAACGAGG",4,42.32,10.73,-0.11,0.04,2.91,1.09,0,">1 nonsynonymous","L5F G83N E141D",3
"lib2","SARS-CoV-2","TATGATGATATCTAAA",3,79.71,10.85,0.01,0.06,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGATGCACCCTAAA",2,5.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K C61Q D137Q",3
"lib2","SARS-CoV-2","TATGATGCCCATTGAG",5,0.48,NA,NA,NA,NA,NA,NA,"stop","F44H Y123G E135H P149* N171G",5
"lib2","SARS-CoV-2","TATGATGCCGAACATT",6,60.57,9.2,-1.64,0.06,2.83,1.13,0,">1 nonsynonymous","G9N S29R G166M",3
"lib2","SARS-CoV-2","TATGATGGAGCATTCA",4,25.8,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","L5F V115W G146A L183C",4
"lib2","SARS-CoV-2","TATGATGTTTTTCAAG",1,83.63,10.67,-0.16,0.05,2.9,1.09,0,">1 nonsynonymous","S36D N120V",2
"lib2","SARS-CoV-2","TATGATTACATAGAGA",10,36.65,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I88E I104R",2
"lib2","SARS-CoV-2","TATGATTAGATTTACG",4,76.49,9.56,-1.27,0.11,1.91,1.05,0.01,"1 nonsynonymous","L162N",1
"lib2","SARS-CoV-2","TATGATTAGTGAGCTG",1,59.72,10.05,-0.78,0.06,2.75,1.11,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","TATGATTCATGCATTT",3,40.02,10.25,-0.58,0.05,2.98,1.03,0,">1 nonsynonymous","S53N E154H",2
"lib2","SARS-CoV-2","TATGATTCGATTAAAA",1,38.66,9.33,-1.51,0.06,2.88,1.06,0,">1 nonsynonymous","T55V N109F",2
"lib2","SARS-CoV-2","TATGATTGTAAGCAAA",3,32.07,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S45I G51R F99I L187H",4
"lib2","SARS-CoV-2","TATGATTTCCAAAACA",1,1.68,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATGATTTCCGTACCG",2,57.53,8.13,-2.71,0.22,1.5,1.13,0.02,">1 nonsynonymous","S113D K132E",2
"lib2","SARS-CoV-2","TATGATTTGAATCCAC",4,10.57,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","Y66S L95H",2
"lib2","SARS-CoV-2","TATGATTTGGAAATAA",1,10.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32M C49M S139N V173Q",4
"lib2","SARS-CoV-2","TATGCAAAAGAGATGG",1,19.85,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F17E A81Q G166C H189I T201K",5
"lib2","SARS-CoV-2","TATGCAAACCGACCGT",4,0.83,NA,NA,NA,NA,NA,NA,"stop","E10V K56D R73F E135* I142S",5
"lib2","SARS-CoV-2","TATGCAAAGGTATCAT",5,1.91,NA,NA,NA,NA,NA,NA,"stop","A89I K114* S139F",3
"lib2","SARS-CoV-2","TATGCAAATCCATTCC",4,44.77,8.82,-2.02,0.37,1.5,1,0.05,">1 nonsynonymous","K26V V32Q C49F N151S F160C",5
"lib2","SARS-CoV-2","TATGCAATATTGTCCA",9,188.98,9.64,-1.2,0.07,2.52,1.07,0,">1 nonsynonymous","V32M T55S G116V S139K",4
"lib2","SARS-CoV-2","TATGCAATCCCGGTCC",2,45.46,10.01,-0.83,0.07,2.31,1.06,0,">1 nonsynonymous","V52K P149T",2
"lib2","SARS-CoV-2","TATGCAATCTGCGCGG",20,369.13,10.66,-0.17,0.03,2.94,1.06,0,"1 nonsynonymous","S41I",1
"lib2","SARS-CoV-2","TATGCAATGTTCCTAA",2,20.96,9.29,-1.55,0.26,1.72,1.04,0.04,">1 nonsynonymous","T15M E135I",2
"lib2","SARS-CoV-2","TATGCACAAAAAAGCT",8,158.69,8.65,-2.19,0.06,2.89,1.11,0,">1 nonsynonymous","C61S G117C",2
"lib2","SARS-CoV-2","TATGCACCACTTTAAT",7,74.08,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N64T N109T R124G",3
"lib2","SARS-CoV-2","TATGCACCTAATTGAA",2,11.18,7.97,-2.87,0.3,1.5,1.07,0.03,">1 nonsynonymous","D90H D97N L162I T170L",4
"lib2","SARS-CoV-2","TATGCACGCCATTCGT",4,18.21,10.91,0.07,0.07,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGCACTGCCGGACA",9,2.23,NA,NA,NA,NA,NA,NA,"stop","Y66* G152C",2
"lib2","SARS-CoV-2","TATGCAGACGCTTAAT",2,19.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T85L N107D",2
"lib2","SARS-CoV-2","TATGCAGACTATAAAT",5,11.09,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T100I A105R N118P F126K",4
"lib2","SARS-CoV-2","TATGCAGGCAGAACTA",10,79.93,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20E V77L D97A D112G S129C",5
"lib2","SARS-CoV-2","TATGCAGGCCCTACTC",4,33.7,7.99,-2.85,0.17,2.03,1.07,0.01,"1 nonsynonymous","G74T",1
"lib2","SARS-CoV-2","TATGCAGGTGTATAAA",6,38.17,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T15H D34A K94T",3
"lib2","SARS-CoV-2","TATGCATAAATATCAA",6,46.95,9.12,-1.71,0.08,1.86,1.07,0,">1 nonsynonymous","V52T P96H L188V",3
"lib2","SARS-CoV-2","TATGCATAAGACTATT",3,19.57,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","S43P G86V N92E",3
"lib2","SARS-CoV-2","TATGCATATAACGACG",8,97.87,10.75,-0.09,0.04,2.97,1.05,0,">1 nonsynonymous","C61A P149A",2
"lib2","SARS-CoV-2","TATGCATATAATGACG",1,13.4,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","N92T W106P D112F",3
"lib2","SARS-CoV-2","TATGCATATGATTAAG",2,19.96,9.6,-1.24,0.06,2.93,1.02,0,">1 nonsynonymous","I104L N109Y P197T",3
"lib2","SARS-CoV-2","TATGCATCAATATAAG",22,111.94,9.22,-1.61,0.08,1.72,1.08,0,">1 nonsynonymous","P7T L95C K128S",3
"lib2","SARS-CoV-2","TATGCATGAAAGGGGC",1,0.07,NA,NA,NA,NA,NA,NA,"stop","R16T N92* Q168A",3
"lib2","SARS-CoV-2","TATGCATGCACCAAAT",4,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L N107T F167S",3
"lib2","SARS-CoV-2","TATGCCACTACTCAGT",9,82.25,10.64,-0.2,0.04,2.98,1.03,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","TATGCCCAAAACTAAG",9,22.54,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","G83C P96M F134L",3
"lib2","SARS-CoV-2","TATGCCCAAAAGCTCG",9,31.76,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","C6K I80W E154Y",3
"lib2","SARS-CoV-2","TATGCCCAAATTATCG",9,118.05,10.76,-0.07,0.04,2.99,1.03,0,">1 nonsynonymous","D97I T148H H189A",3
"lib2","SARS-CoV-2","TATGCCCAATCTAGAG",2,36.15,8.35,-2.49,0.21,1.95,1.13,0.02,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","TATGCCCACGAACTGT",4,115.47,10.81,-0.03,0.03,2.96,1.05,0,">1 nonsynonymous","G83Y K199S",2
"lib2","SARS-CoV-2","TATGCCCAGCATAGAG",1,5.85,10.75,-0.09,0.08,2.78,1.24,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGCCCCATCAAAAG",8,40.83,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","S19I S41I L122E T170L",4
"lib2","SARS-CoV-2","TATGCCCTAAAGGTCC",7,56.23,9.35,-1.49,0.09,2.8,1.15,0,">1 nonsynonymous","T3K G174V",2
"lib2","SARS-CoV-2","TATGCCCTGGACGACG",4,46.23,10.87,0.04,0.05,3,1.03,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","TATGCCGCAAAATTAT",3,50.67,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R73T G117D C158M",3
"lib2","SARS-CoV-2","TATGCCTCAAGGGAAA",4,5.95,9.36,-1.48,0.05,3,1,0,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","TATGCCTCCAACTAGT",3,69.72,10.85,0.01,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGCGAAGATAAGGC",7,101.66,10.7,-0.14,0.04,2.94,1.06,0,"1 nonsynonymous","N151T",1
"lib2","SARS-CoV-2","TATGCGAGCTTGACCA",2,15.45,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A14W K56N E76V P149A F156S",5
"lib2","SARS-CoV-2","TATGCGATGAGTACAC",3,22.36,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3F V37A D90V G116D R124N T170I",6
"lib2","SARS-CoV-2","TATGCGCCAAGATAAG",5,31.8,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","TATGCGGGAATAGTAC",1,28.44,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F44P R179E",2
"lib2","SARS-CoV-2","TATGCGGGGGCTAAAC",2,7.52,8.52,-2.32,0.37,1.97,1.14,0.05,">1 nonsynonymous","S43V D98L S139I",3
"lib2","SARS-CoV-2","TATGCTAACAAGATAA",1,7.56,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","C49A D97R V103Q T148I Y175E",5
"lib2","SARS-CoV-2","TATGCTAATATAAAAG",5,28.25,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F8S G51C W106S F185R",4
"lib2","SARS-CoV-2","TATGCTAATATGAATT",3,54.74,6,-4.84,2,1.5,1.36,0.04,">1 nonsynonymous","W23G K94E N151R N157H",4
"lib2","SARS-CoV-2","TATGCTACATCAACGA",2,22.38,9.67,-1.17,0.12,2.71,1.14,0.01,">1 nonsynonymous","P149L E154W",2
"lib2","SARS-CoV-2","TATGCTACTAACCTCT",2,42.16,10.39,-0.45,0.05,2.96,1.06,0,">1 nonsynonymous","I2K D59E P169L",3
"lib2","SARS-CoV-2","TATGCTAGGCTTGGAT",7,1.55,NA,NA,NA,NA,NA,NA,"stop","A33N D68* Y159V G174V",4
"lib2","SARS-CoV-2","TATGCTAGGTGTTTTA",1,11.79,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","I2L G9C S43P C102P R124N N130M",6
"lib2","SARS-CoV-2","TATGCTAGTACGTCAA",9,256.71,10.27,-0.57,0.03,2.77,1.05,0,"1 nonsynonymous","P133C",1
"lib2","SARS-CoV-2","TATGCTCAAATCGAAT",1,0.57,NA,NA,NA,NA,NA,NA,"stop","A18* D68M P82S K114M K199N",5
"lib2","SARS-CoV-2","TATGCTCCACATGCGA",1,30.7,10.33,-0.5,0.04,2.89,1.02,0,">1 nonsynonymous","C61G S139C",2
"lib2","SARS-CoV-2","TATGCTCTTAAATACT",5,31.05,9.23,-1.61,0.2,1.5,1,0.02,">1 nonsynonymous","V11D A33L Y66D",3
"lib2","SARS-CoV-2","TATGCTGAAGTCCTCA",3,6.93,NA,NA,NA,NA,NA,NA,"stop","F12I V52H I104*",3
"lib2","SARS-CoV-2","TATGCTGCTTAGCCAA",8,70.58,10.67,-0.17,0.04,2.92,1.09,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","TATGCTTACTAAACAT",10,3.84,NA,NA,NA,NA,NA,NA,"stop","E10* V65Y",2
"lib2","SARS-CoV-2","TATGCTTAGAGGCACA",1,42.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55L D98N S108Y R124T",4
"lib2","SARS-CoV-2","TATGCTTGACCATAAT",2,9.6,7.88,-2.95,0.29,1.5,1.11,0.02,">1 nonsynonymous","N4V G146L",2
"lib2","SARS-CoV-2","TATGCTTGCTATGCCT",3,2.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TATGCTTTCACGATAA",8,0.69,NA,NA,NA,NA,NA,NA,"stop","I72F Q84F L122* P161L",4
"lib2","SARS-CoV-2","TATGGAAAAATATGCG",10,136.24,10.51,-0.32,0.04,2.94,1.01,0,"1 nonsynonymous","F47Y",1
"lib2","SARS-CoV-2","TATGGAAACAATTTTC",2,8.13,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","I104Q G117E D137W",3
"lib2","SARS-CoV-2","TATGGAAACCGTTTTT",4,0.07,NA,NA,NA,NA,NA,NA,"stop","F8* W106L E135R",3
"lib2","SARS-CoV-2","TATGGAAACGAGCCAT",6,115.88,10.25,-0.58,0.04,2.86,1.09,0,">1 nonsynonymous","A14K K94A S129T",3
"lib2","SARS-CoV-2","TATGGAAACGGGATTA",6,81.28,9.59,-1.24,0.09,2.46,1.05,0,">1 nonsynonymous","K87I P96F I138T",3
"lib2","SARS-CoV-2","TATGGAAAGCACAGAA",2,0.07,NA,NA,NA,NA,NA,NA,"stop","G86R N107F L122*",3
"lib2","SARS-CoV-2","TATGGAAATCTACTGA",1,6.59,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","N4W I28T T55R I138E Q168G",5
"lib2","SARS-CoV-2","TATGGAACAGGTTTGG",2,2.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C N107W Y119R N157T",4
"lib2","SARS-CoV-2","TATGGAATTCCCCTTT",3,78.95,8.97,-1.86,0.06,2.88,1.08,0,">1 nonsynonymous","K94A Y119G",2
"lib2","SARS-CoV-2","TATGGACAATAACGAG",6,85.08,10.05,-0.78,0.04,2.87,1.05,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","TATGGACACCGCTGAT",6,2.5,NA,NA,NA,NA,NA,NA,"stop","P133*",1
"lib2","SARS-CoV-2","TATGGACATCGACATA",1,11.74,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P7L F12W K26L P96K",4
"lib2","SARS-CoV-2","TATGGACCTTTGCAAA",8,67.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16A C61N F99S",3
"lib2","SARS-CoV-2","TATGGACTAGAGTGAG",1,0.27,NA,NA,NA,NA,NA,NA,"stop","C158V P169* S184R",3
"lib2","SARS-CoV-2","TATGGACTGCTTATGT",2,52.55,10.6,-0.24,0.06,2.82,1.19,0,">1 nonsynonymous","C61E D90K S200F",3
"lib2","SARS-CoV-2","TATGGACTGTTCCCTT",4,139.78,9.91,-0.92,0.04,2.65,1.05,0,">1 nonsynonymous","C61M V173S",2
"lib2","SARS-CoV-2","TATGGAGCATAGAATT",1,20.18,8.27,-2.57,0.11,2.38,1.04,0,">1 nonsynonymous","Y35K A42S N151M P169Q",4
"lib2","SARS-CoV-2","TATGGAGCCAGGTCGT",1,64.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N107F Q176N",2
"lib2","SARS-CoV-2","TATGGAGCCTTTAACG",13,192.15,10.5,-0.33,0.04,2.87,1.06,0,">1 nonsynonymous","A105S G152R",2
"lib2","SARS-CoV-2","TATGGAGGAAGAGTGA",6,54.56,6,-4.84,2,3,1.17,0,"1 nonsynonymous","Y123P",1
"lib2","SARS-CoV-2","TATGGAGGTTTAGAAT",8,129.96,6.58,-4.26,0.33,1.5,1.17,0.02,">1 nonsynonymous","K26G D137S",2
"lib2","SARS-CoV-2","TATGGATACTCGAATT",5,31.74,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A81F E141Y G152L",3
"lib2","SARS-CoV-2","TATGGATAGCGGTAAC",10,120.6,9.57,-1.26,0.08,2.12,1.06,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TATGGATGCAATAACG",2,43.36,9.43,-1.41,0.11,1.9,1.11,0.01,">1 nonsynonymous","K48W D90L",2
"lib2","SARS-CoV-2","TATGGATGCTTATCCG",12,33.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S I104N F160E",3
"lib2","SARS-CoV-2","TATGGATGGAGAATTG",9,22.1,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","I2D Y50R L60S A81F G86R Q144S G166V",7
"lib2","SARS-CoV-2","TATGGATGGGAGTTTG",2,28.55,8.72,-2.12,0.15,1.72,1.22,0.01,">1 nonsynonymous","G9W F44E S139L",3
"lib2","SARS-CoV-2","TATGGATTCCGAGTTT",2,19.81,10.21,-0.63,0.07,2.76,1.16,0.01,">1 nonsynonymous","A42Y F62D",2
"lib2","SARS-CoV-2","TATGGCACAGAATGAG",12,66.75,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","C49P K56H D90Y D112R E154S K198D",6
"lib2","SARS-CoV-2","TATGGCACTAAACAAC",5,67.52,10.93,0.09,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGGCAGTGAAAGCT",1,48.14,10.54,-0.29,0.08,2.74,1.12,0,">1 nonsynonymous","Y91L L122M P191I",3
"lib2","SARS-CoV-2","TATGGCATCAGATCCA",1,24.98,9.71,-1.13,0.07,2.8,1.02,0,">1 nonsynonymous","Y66L E154W",2
"lib2","SARS-CoV-2","TATGGCATCAGCTGAA",2,0.13,NA,NA,NA,NA,NA,NA,"stop","I28R L60* T85C G86C K128Y C150W T170H",7
"lib2","SARS-CoV-2","TATGGCATTCATATTA",1,66.42,10.79,-0.05,0.06,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGGCCAAGTCCTAA",7,2.05,NA,NA,NA,NA,NA,NA,"stop","A14S R78W G86* W106G P133H P149Y N171Y",7
"lib2","SARS-CoV-2","TATGGCCAAGTTGAAA",2,9.13,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R27A N64K V103N H189R",4
"lib2","SARS-CoV-2","TATGGCCACTAAAGGG",2,16.43,10.68,-0.16,0.05,2.92,1.09,0,">1 nonsynonymous","L5R L38F D90S L188T T201A",5
"lib2","SARS-CoV-2","TATGGCCATCATGTTA",6,100.17,10.87,0.04,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGGCCCCCTCCCAG",7,113.19,10.79,-0.05,0.05,3,1.03,0,">1 nonsynonymous","N24A T100L",2
"lib2","SARS-CoV-2","TATGGCCCCGCGCAGT",4,33.63,8.1,-2.73,0.3,1.5,1.05,0.03,">1 nonsynonymous","G51C L60P",2
"lib2","SARS-CoV-2","TATGGCCTCCAATTTG",2,17.49,10.79,-0.05,0.03,3,1.01,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","TATGGCCTGTCCAATG",4,23.57,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V52L G86R",2
"lib2","SARS-CoV-2","TATGGCGACAGAAAAT",15,255.46,10.65,-0.18,0.02,2.95,1.05,0,">1 nonsynonymous","V52I A81G",2
"lib2","SARS-CoV-2","TATGGCGCAACCTCGA",8,79.63,10.7,-0.14,0.06,2.94,1.06,0,">1 nonsynonymous","T3G C61M",2
"lib2","SARS-CoV-2","TATGGCGTAACACCTG",2,16.71,10.09,-0.75,0.03,2.95,1.04,0,"1 nonsynonymous","Q144Y",1
"lib2","SARS-CoV-2","TATGGCTAATAAAATA",6,66.94,10.87,0.04,0.07,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TATGGCTCACTAGGAA",2,11.72,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F8V A42T G86R K94V G116S",5
"lib2","SARS-CoV-2","TATGGCTCGCCTGACA",1,17.07,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","P82S G86R L95R K199M",4
"lib2","SARS-CoV-2","TATGGCTTCCTTTCGC",5,133.17,10.7,-0.14,0.07,2.92,1.09,0,"1 nonsynonymous","L122E",1
"lib2","SARS-CoV-2","TATGGGACAACACCTG",3,8.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C6F F44S C49S L60K",4
"lib2","SARS-CoV-2","TATGGGCGACCTGATA",4,13.14,7.15,-3.69,0.4,1.5,1.1,0.03,">1 nonsynonymous","K56C K132P V182S",3
"lib2","SARS-CoV-2","TATGGGGCAGTAGGCC",1,18.81,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","D68G L95P S113N R124F Q144N P149A E154V P169R",8
"lib2","SARS-CoV-2","TATGGGGGATTAGAAT",1,7.49,10.26,-0.58,0.07,3,1.02,0,">1 nonsynonymous","A33D Y39L",2
"lib2","SARS-CoV-2","TATGGGTGGAGTGTTA",2,13.45,10.72,-0.12,0.09,2.74,1.1,0.01,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","TATGGGTTACACGTGT",7,5.1,6,-4.84,2,1.5,1.41,0.04,">1 nonsynonymous","N13R K87I C102H C158A",4
"lib2","SARS-CoV-2","TATGGGTTCTATTACA",8,29.68,9.34,-1.5,0.14,1.88,1.12,0.01,">1 nonsynonymous","A14I T63W E154L",3
"lib2","SARS-CoV-2","TATGGGTTGTATTTTC",4,8.28,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","S19K C49W N157A",3
"lib2","SARS-CoV-2","TATGGTAACACTGTAC",2,30.98,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36E Y93Q",2
"lib2","SARS-CoV-2","TATGGTAACATAACAA",11,79.56,9.99,-0.85,0.06,2.68,1.06,0,">1 nonsynonymous","T15D D59N Q144S P149L",4
"lib2","SARS-CoV-2","TATGGTAATTCTACAC",3,30.2,10.47,-0.37,0.07,2.92,1.05,0,">1 nonsynonymous","N4H F126L",2
"lib2","SARS-CoV-2","TATGGTACAACGACAG",2,18.28,10.75,-0.09,0.07,2.93,1,0,">1 nonsynonymous","S53L Q144S",2
"lib2","SARS-CoV-2","TATGGTAGCGATAAAA",3,18.22,10.79,-0.05,0.04,3,1.01,0,">1 nonsynonymous","N1G C61V",2
"lib2","SARS-CoV-2","TATGGTAGTATCAATT",8,40.97,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V52F S113K R136P G146S P197V",5
"lib2","SARS-CoV-2","TATGGTATATGCTTAT",5,0.03,NA,NA,NA,NA,NA,NA,"stop","Y21K R27G K48*",3
"lib2","SARS-CoV-2","TATGGTCCCAATAACA",2,10.48,8.9,-1.93,0.28,2.17,1.16,0.02,">1 nonsynonymous","T3S D34S G155V K199I",4
"lib2","SARS-CoV-2","TATGGTCCGTGACGAC",1,1.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","TATGGTCGAATCCTAA",8,172.92,10.81,-0.03,0.05,2.95,1.07,0,">1 nonsynonymous","I2K N120L P197I",3
"lib2","SARS-CoV-2","TATGGTCTGCCTCCCT",1,66.94,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S113T Q168P",2
"lib2","SARS-CoV-2","TATGGTGCACCAAGAT",3,41.83,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","G51P L60S A89N",3
"lib2","SARS-CoV-2","TATGGTGCCACCATCG",5,185.05,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y119V Y143K",2
"lib2","SARS-CoV-2","TATGGTGCGCTTAAAG",8,65.73,8.16,-2.68,0.4,1.5,1,0.06,">1 nonsynonymous","S19R C49Q P82Y Y119R P133L",5
"lib2","SARS-CoV-2","TATGGTGGCCCCAATT",5,52.08,9.53,-1.31,0.06,2.69,1.12,0,">1 nonsynonymous","V32Y D90R L131V F156L",4
"lib2","SARS-CoV-2","TATGGTGTACGCAATA",4,73.89,10.16,-0.67,0.07,2.71,1.05,0,">1 nonsynonymous","A105C T201I",2
"lib2","SARS-CoV-2","TATGGTTAAATTGTTC",5,105.16,10.75,-0.08,0.06,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGGTTACTATTGTT",2,54.4,9.44,-1.4,0.1,1.98,1.05,0,"1 nonsynonymous","R136P",1
"lib2","SARS-CoV-2","TATGGTTATAGTTAGC",3,30.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38G C49L T85S N120S L125R P161S",6
"lib2","SARS-CoV-2","TATGGTTCTGCCGCAA",6,5.31,NA,NA,NA,NA,NA,NA,"stop","L38* F99Y",2
"lib2","SARS-CoV-2","TATGTAAAAAAATGCA",5,45.42,9.51,-1.32,0.19,1.93,1.18,0.01,">1 nonsynonymous","S53Y C61P V173S",3
"lib2","SARS-CoV-2","TATGTAAACAGGGAGC",7,25.42,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R16P I88C A105M",3
"lib2","SARS-CoV-2","TATGTAAACATAGTAC",6,40.38,9.36,-1.47,0.11,1.76,1.1,0.01,">1 nonsynonymous","V77K T140K",2
"lib2","SARS-CoV-2","TATGTAACATAACGAC",6,115.15,10.15,-0.68,0.06,2.56,1.07,0,">1 nonsynonymous","N64Y A81V S164T P191H",4
"lib2","SARS-CoV-2","TATGTAACATGCTACG",17,99.7,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L95M F99I W106N F160D",4
"lib2","SARS-CoV-2","TATGTAACTTGATTAA",1,61.35,10.08,-0.75,0.08,2.76,1,0,">1 nonsynonymous","G83V T148H",2
"lib2","SARS-CoV-2","TATGTAAGTAAGGCCT",13,104.37,10.86,0.03,0.05,2.88,1.11,0,">1 nonsynonymous","T3R T100K E154R",3
"lib2","SARS-CoV-2","TATGTAATATTAATCA",4,28.71,10.99,0.16,0.07,2.89,1.12,0,"1 nonsynonymous","S53T",1
"lib2","SARS-CoV-2","TATGTAATCAGTGGAA",2,23.39,10.73,-0.1,0.06,2.9,1.12,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","TATGTAATTGTGTTGA",7,50.65,6.02,-4.82,1.29,1.5,1.23,0.03,">1 nonsynonymous","I88F P149H S200Y",3
"lib2","SARS-CoV-2","TATGTACAATCACAAC",1,8.63,10.51,-0.33,0.09,2.81,1.21,0,"1 nonsynonymous","F156P",1
"lib2","SARS-CoV-2","TATGTACCATGCGTAC",5,44.41,9.99,-0.84,0.1,2.49,1.01,0,">1 nonsynonymous","F47S D59S",2
"lib2","SARS-CoV-2","TATGTACGAAATTCAG",8,1.72,NA,NA,NA,NA,NA,NA,"stop","F44E L60* N92S S113G E141L T201M",6
"lib2","SARS-CoV-2","TATGTACGAATAACAG",4,74.31,10.41,-0.43,0.06,2.87,1.09,0,">1 nonsynonymous","C61L P169R T201S",3
"lib2","SARS-CoV-2","TATGTACGAATACTGA",9,60.01,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A22S Y35N A81C N171K",4
"lib2","SARS-CoV-2","TATGTACGATACAAGG",5,15.47,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","Y39T V65S W106Y F167Y G172Q",5
"lib2","SARS-CoV-2","TATGTACTACCGCCTA",3,245.57,9.85,-0.99,0.04,2.91,1.05,0,">1 nonsynonymous","N1H P177A",2
"lib2","SARS-CoV-2","TATGTAGAAAATCTGC",2,2.28,NA,NA,NA,NA,NA,NA,"stop","R25L A33Q D90L T201*",4
"lib2","SARS-CoV-2","TATGTAGACTCTAATT",15,130.58,9.34,-1.49,0.15,1.57,1.08,0.01,">1 nonsynonymous","T63F G83V T140R F160K",4
"lib2","SARS-CoV-2","TATGTAGTATAATCAG",4,63.36,9.93,-0.91,0.07,2.41,1.07,0,"1 nonsynonymous","L131F",1
"lib2","SARS-CoV-2","TATGTATAAACGAAAC",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59R V77F K128T",3
"lib2","SARS-CoV-2","TATGTATAGTAAATTG",2,9.75,6.01,-4.83,1.26,1.5,1.1,0.04,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TATGTATCGTACCCTA",3,41.86,10.24,-0.6,0.06,2.76,1.05,0,"1 nonsynonymous","N40I",1
"lib2","SARS-CoV-2","TATGTATCTCCCTATC",1,43.77,8.68,-2.16,0.11,2.03,1.06,0,">1 nonsynonymous","F99L E154F",2
"lib2","SARS-CoV-2","TATGTCAAGAGCCTCC",3,29.52,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L38V L122F F167T",3
"lib2","SARS-CoV-2","TATGTCAAGCCCGACT",11,170.1,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","W106L N120S R127L",3
"lib2","SARS-CoV-2","TATGTCAAGGCAATGA",2,7.9,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATGTCAAGGTATAAG",2,23,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10M S45N T85S Y91K D112F I138D T148I",7
"lib2","SARS-CoV-2","TATGTCAATTTTAATT",2,12.41,10.25,-0.59,0.12,2.88,1.07,0.01,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","TATGTCACTCTAACGC",4,49.62,10.88,0.04,0.05,2.91,1.1,0,">1 nonsynonymous","G83L N171T V173A",3
"lib2","SARS-CoV-2","TATGTCATACACATTC",1,14.23,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N40C I88H A89S F99I L122E T140L",6
"lib2","SARS-CoV-2","TATGTCATTATCACTA",6,29.69,6.23,-4.61,0.35,1.5,1.15,0.01,">1 nonsynonymous","V71L Y119R G146Y",3
"lib2","SARS-CoV-2","TATGTCCACCGAACGA",11,272.34,10.6,-0.24,0.03,2.92,1.06,0,">1 nonsynonymous","Q84R P149L",2
"lib2","SARS-CoV-2","TATGTCCATCCACGGA",3,0.51,NA,NA,NA,NA,NA,NA,"stop","T3P S36K D112S G146W Y165D V173*",6
"lib2","SARS-CoV-2","TATGTCCATCGAGAAC",13,147.44,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V32W N107A C150A V180F",4
"lib2","SARS-CoV-2","TATGTCCTCCCTCAAG",1,9.47,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V11T V71K S113V N120T",4
"lib2","SARS-CoV-2","TATGTCCTCGCCATAA",1,40.03,7.89,-2.95,0.25,1.95,1.1,0.03,">1 nonsynonymous","K87N D137V G174A",3
"lib2","SARS-CoV-2","TATGTCGACCTGGGTA",2,6.58,8.49,-2.35,0.28,2.63,1.17,0.03,">1 nonsynonymous","Y91L N107K K114R",3
"lib2","SARS-CoV-2","TATGTCGTAAAGCCCA",1,23.91,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5R L38T S113L T140N",4
"lib2","SARS-CoV-2","TATGTCGTACTCTATA",2,55.53,10.41,-0.43,0.04,2.88,1.11,0,">1 nonsynonymous","G83M K114D",2
"lib2","SARS-CoV-2","TATGTCGTAGAAATTA",2,48.35,10.98,0.14,0.07,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGTCTAATATATAG",5,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T K94L L162R",3
"lib2","SARS-CoV-2","TATGTCTACGGTGGGC",21,231.34,6.16,-4.67,0.71,1.5,1.2,0.02,">1 nonsynonymous","T55S V77A P133I A192F",4
"lib2","SARS-CoV-2","TATGTCTAGCCATCAA",14,197.18,10.65,-0.18,0.03,2.96,1.07,0,">1 nonsynonymous","G9V Y35L K87Y",3
"lib2","SARS-CoV-2","TATGTCTTTTCATAAA",5,569.13,7.15,-3.69,0.24,1.5,1.11,0.01,">1 nonsynonymous","R27I A42R I104K",3
"lib2","SARS-CoV-2","TATGTGAAGCAGTAAT",15,230.38,8.37,-2.47,0.11,2.91,1.09,0.01,">1 nonsynonymous","N130K Y159A",2
"lib2","SARS-CoV-2","TATGTGAAGGAAAAGT",5,68.46,10.66,-0.17,0.05,2.84,1.1,0,">1 nonsynonymous","G83R T148V",2
"lib2","SARS-CoV-2","TATGTGAAGTTTAACA",6,73.02,10.26,-0.58,0.05,2.69,1.1,0,">1 nonsynonymous","L5C R136L",2
"lib2","SARS-CoV-2","TATGTGAATGGATGAA",3,36.24,8.47,-2.37,0.14,2.74,1.07,0.01,">1 nonsynonymous","Y39R S45H N157T",3
"lib2","SARS-CoV-2","TATGTGAATTGCGATG",8,237.03,10.81,-0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGTGACAAATTCTG",1,9.9,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","A33R K94T",2
"lib2","SARS-CoV-2","TATGTGATCTCCTATC",4,62.86,10.7,-0.13,0.06,3,1.03,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","TATGTGATTAGCAAAG",3,51.33,10.09,-0.74,0.07,2.84,1,0,">1 nonsynonymous","G9L L57M G152D",3
"lib2","SARS-CoV-2","TATGTGCACCAATAAT",11,81.02,9.23,-1.6,0.07,2.04,1.06,0,">1 nonsynonymous","K56Q L162W",2
"lib2","SARS-CoV-2","TATGTGCCAAGGAGTC",9,145.85,10.93,0.09,0.07,2.83,1.11,0,"1 nonsynonymous","R16E",1
"lib2","SARS-CoV-2","TATGTGCGGAGGCTTG",6,19.27,6.13,-4.7,1.35,1.5,1.3,0.06,">1 nonsynonymous","N13L N118Y S139K",3
"lib2","SARS-CoV-2","TATGTGCTAATTAAGC",4,59.82,10.81,-0.03,0.06,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGTGCTCCGTACAC",6,61.29,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","D90V F99S W106Y S184C",4
"lib2","SARS-CoV-2","TATGTGGCCAACAAAA",7,135.47,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N40Y Y121V N157F",3
"lib2","SARS-CoV-2","TATGTGGTATACGTAT",1,10.16,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","L38Y Y119A C158G Q176L",4
"lib2","SARS-CoV-2","TATGTGGTTGATAATC",6,3.29,NA,NA,NA,NA,NA,NA,"stop","S69D N107* D112T P149T",4
"lib2","SARS-CoV-2","TATGTGTCTAGTTACC",15,46.12,6.49,-4.35,0.58,1.5,1.15,0.04,">1 nonsynonymous","V52H P149D Y178R",3
"lib2","SARS-CoV-2","TATGTGTGAATAGGGC",4,75.08,10.66,-0.17,0.05,2.89,1.12,0,">1 nonsynonymous","L5V A190V",2
"lib2","SARS-CoV-2","TATGTGTGCTACATCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E R27K C158D",3
"lib2","SARS-CoV-2","TATGTGTTCACCAAAC",8,81.34,7.76,-3.07,0.22,1.5,1.15,0.01,">1 nonsynonymous","N1S S36L F167L",3
"lib2","SARS-CoV-2","TATGTGTTTCGGACTA",4,27.33,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A14E V37D F47A A89Q",4
"lib2","SARS-CoV-2","TATGTTAACGAAAATA",11,78.56,7.89,-2.94,0.18,1.64,1.14,0.01,">1 nonsynonymous","E135I Y159M",2
"lib2","SARS-CoV-2","TATGTTAAGCACTACA",5,53.5,6.38,-4.46,0.61,1.5,1.28,0.03,">1 nonsynonymous","F12P N120V",2
"lib2","SARS-CoV-2","TATGTTAAGTTAAGGT",1,6.57,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","A67P",1
"lib2","SARS-CoV-2","TATGTTAATGCCACGG",4,60.22,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93T L162Q",2
"lib2","SARS-CoV-2","TATGTTACAACACCGA",4,40.56,8.44,-2.39,0.11,2.87,1,0.01,"1 nonsynonymous","G166E",1
"lib2","SARS-CoV-2","TATGTTACAGCACAAA",2,12.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50D T55N",2
"lib2","SARS-CoV-2","TATGTTACGTATTTCA",12,219.06,10.68,-0.15,0.04,2.93,1.06,0,"1 nonsynonymous","T85F",1
"lib2","SARS-CoV-2","TATGTTAGAAAACCAG",5,65.63,8.3,-2.54,0.25,1.5,1.01,0.04,">1 nonsynonymous","D97Q A105L",2
"lib2","SARS-CoV-2","TATGTTATCCCAAGTC",3,46.03,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S29Y N58T N120G C158E",4
"lib2","SARS-CoV-2","TATGTTATTTCCGAAT",3,2.78,NA,NA,NA,NA,NA,NA,"stop","Q84* C150F F160T",3
"lib2","SARS-CoV-2","TATGTTCAAACAATCC",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13P F47I T55W G83S G86F W106E",6
"lib2","SARS-CoV-2","TATGTTCCGCAGTAGA",2,102.8,10.88,0.05,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TATGTTCCTATGAGAG",3,24.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F R179I A192H",3
"lib2","SARS-CoV-2","TATGTTCGATGCCAAT",1,66.75,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C102L I138M Q176L",3
"lib2","SARS-CoV-2","TATGTTCTCCTAATTC",1,36.51,10.37,-0.47,0.09,2.92,1.12,0,">1 nonsynonymous","T3D Y35T",2
"lib2","SARS-CoV-2","TATGTTGAAGGATGTA",8,60.3,9.32,-1.51,0.12,2.39,1.07,0,">1 nonsynonymous","C6L A42D L122K Q144L A190S",5
"lib2","SARS-CoV-2","TATGTTGAGAACCATG",6,145.55,10.03,-0.8,0.06,2.42,1.05,0,">1 nonsynonymous","A22L S36L S43Y",3
"lib2","SARS-CoV-2","TATGTTGAGCATACAG",9,59.62,9.48,-1.35,0.13,1.88,1.08,0.01,">1 nonsynonymous","G9D V77W",2
"lib2","SARS-CoV-2","TATGTTGCAAAGCGAA",6,76.48,10.65,-0.18,0.04,2.97,1.02,0,">1 nonsynonymous","V37G Q163R",2
"lib2","SARS-CoV-2","TATGTTGCAGGTATAC",2,18.1,6.39,-4.44,0.59,1.5,1.07,0.01,">1 nonsynonymous","A18T S113R P133Y",3
"lib2","SARS-CoV-2","TATGTTGCTTGACAGG",2,73.83,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D112M V153N Y175A",3
"lib2","SARS-CoV-2","TATGTTGTGCGCAGAA",13,151.45,10.2,-0.63,0.05,2.84,1.05,0,"1 nonsynonymous","L57G",1
"lib2","SARS-CoV-2","TATGTTTAACCTTAAT",5,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K V77M R127S",3
"lib2","SARS-CoV-2","TATGTTTATAATCACG",2,45.26,10.69,-0.14,0.03,2.95,1.07,0,">1 nonsynonymous","R16H G152S",2
"lib2","SARS-CoV-2","TATGTTTGAAAAGGAT",9,114.99,10.95,0.11,0.06,2.94,1.06,0,"1 nonsynonymous","Y39I",1
"lib2","SARS-CoV-2","TATGTTTTACACCTGA",2,26.64,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","C6L G51V D97S C158I",4
"lib2","SARS-CoV-2","TATTAAAAAAAATATG",3,15.19,10.69,-0.14,0.07,2.93,1.06,0,"1 nonsynonymous","S29I",1
"lib2","SARS-CoV-2","TATTAAAAACCGTTAA",11,3.03,NA,NA,NA,NA,NA,NA,"stop","T63G D98N S113* L122K",4
"lib2","SARS-CoV-2","TATTAAAAATCAACGA",1,19.8,7.45,-3.39,0.29,1.82,1.14,0.02,">1 nonsynonymous","F12R T55K T100S I142A P149R",5
"lib2","SARS-CoV-2","TATTAAAACGACCAAA",6,42.86,10.29,-0.54,0.08,2.75,1.08,0,">1 nonsynonymous","S45G K56V",2
"lib2","SARS-CoV-2","TATTAAACATTCGGTG",2,89.11,8.82,-2.01,0.06,2.91,1.07,0,">1 nonsynonymous","P7T L60R N157S P197L",4
"lib2","SARS-CoV-2","TATTAAACGCCAGCAC",4,55.87,10.78,-0.06,0.05,3,1.04,0,">1 nonsynonymous","D59A K198L",2
"lib2","SARS-CoV-2","TATTAAAGAAAGTGCC",4,60.76,10.59,-0.25,0.04,2.98,1,0,">1 nonsynonymous","D98G V173F",2
"lib2","SARS-CoV-2","TATTAAAGAAGCTAAG",1,37.4,10.71,-0.12,0.07,2.88,1.13,0,"1 nonsynonymous","G152R",1
"lib2","SARS-CoV-2","TATTAAAGATACTTTT",13,231.52,6.51,-4.33,0.14,1.5,1.13,0,">1 nonsynonymous","L122T C158Y",2
"lib2","SARS-CoV-2","TATTAAAGGCCGCATG",13,14.87,NA,NA,NA,NA,NA,NA,"stop","L38I V71* N92F N120W D137F",5
"lib2","SARS-CoV-2","TATTAAAGTGCTCTAA",8,77.9,6.45,-4.38,0.27,1.5,1.12,0.01,">1 nonsynonymous","R16H Y35C W106K I142H",4
"lib2","SARS-CoV-2","TATTAAATGTCACTAA",2,48.36,10.19,-0.64,0.04,2.85,1.07,0,">1 nonsynonymous","S45P C195S",2
"lib2","SARS-CoV-2","TATTAAATTAAGTAAA",9,76.64,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68Q V153Y",2
"lib2","SARS-CoV-2","TATTAAATTATATCGC",2,21.98,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","V37C P96I N107I",3
"lib2","SARS-CoV-2","TATTAAATTCGTCAAC",5,37.69,10.72,-0.12,0.08,2.9,1.15,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","TATTAACACCTGTAAC",1,41.41,10.8,-0.04,0.09,2.77,1.07,0,">1 nonsynonymous","P7S Y35L",2
"lib2","SARS-CoV-2","TATTAACAGATAAATA",7,138.93,10.62,-0.22,0.03,2.92,1.08,0,">1 nonsynonymous","C61N F134L",2
"lib2","SARS-CoV-2","TATTAACAGATAATCT",5,35.85,10.62,-0.22,0.06,2.92,1.1,0,">1 nonsynonymous","Q144G T201M",2
"lib2","SARS-CoV-2","TATTAACCAACCTACC",6,39.09,10.58,-0.26,0.07,2.85,1.16,0,">1 nonsynonymous","I2A S29T S45T R78K A89S",5
"lib2","SARS-CoV-2","TATTAACCCAGTAACG",1,30.25,6.89,-3.95,0.2,1.5,1.09,0.01,">1 nonsynonymous","F47V C158R",2
"lib2","SARS-CoV-2","TATTAACCCGTTTGGT",10,141.44,10.85,0.01,0.04,2.88,1.1,0,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","TATTAACGGATAGCTG",6,39.92,6,-4.84,1.91,3,1.12,0,">1 nonsynonymous","N4H F12I Q84G N107S Y121F G155Y F160L P169S",8
"lib2","SARS-CoV-2","TATTAACGTTAGCGCA",1,25.7,10.83,0,0.06,2.87,1.16,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","TATTAACTAAATAAAG",6,46.46,10.79,-0.05,0.04,2.97,1.02,0,"1 nonsynonymous","E141V",1
"lib2","SARS-CoV-2","TATTAAGAACCACTTG",3,61.58,10.89,0.05,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTAAGAAGCCAAAC",3,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V P82M D90I F99C N120H P191S",6
"lib2","SARS-CoV-2","TATTAAGAAGGGTCTT",18,119.5,6.21,-4.63,0.75,1.5,1.18,0.02,"1 nonsynonymous","C49G",1
"lib2","SARS-CoV-2","TATTAAGAATAAGATC",4,85.25,6.25,-4.58,0.39,1.5,1.12,0.01,">1 nonsynonymous","T63M G86V N107V N171S",4
"lib2","SARS-CoV-2","TATTAAGAGAAAGCCA",5,36.94,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A89E Y121L E141D T201I",4
"lib2","SARS-CoV-2","TATTAAGATGCTATAT",1,20.37,10.29,-0.55,0.07,2.87,1.02,0,">1 nonsynonymous","T15D S36P",2
"lib2","SARS-CoV-2","TATTAAGATTAGCGAC",4,27.98,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","K48W I88E P96Y G172R",4
"lib2","SARS-CoV-2","TATTAAGCAATTACTG",5,27.94,6,-4.84,1.52,3,1.16,0.01,">1 nonsynonymous","A22D K56L F70E",3
"lib2","SARS-CoV-2","TATTAAGCAATTTTAT",5,51.52,10.88,0.04,0.05,2.99,1.04,0,"1 nonsynonymous","T201G",1
"lib2","SARS-CoV-2","TATTAAGCAGTATCTC",4,18.75,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15E Y66F L95S N110Q Y119N G146K P161H",7
"lib2","SARS-CoV-2","TATTAAGCTCTATGTT",3,29.14,10.81,-0.03,0.09,2.83,1.19,0,">1 nonsynonymous","L5E S29C",2
"lib2","SARS-CoV-2","TATTAAGGAGTACAGT",1,6.12,7.32,-3.51,0.39,1.5,1.08,0.03,">1 nonsynonymous","W23R S43E S53R T100C",4
"lib2","SARS-CoV-2","TATTAAGTTGTAAAAA",3,96.3,8.19,-2.64,0.14,2.15,1.04,0.01,">1 nonsynonymous","A22T Y119Q G152C",3
"lib2","SARS-CoV-2","TATTAATAAGTCCTCA",7,247.69,8.16,-2.67,0.11,2.08,1.09,0,">1 nonsynonymous","I88L Y175N",2
"lib2","SARS-CoV-2","TATTAATAATCCAAAT",5,12.42,10.97,0.13,0.12,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTAATAATCTGTTA",13,136.45,8.81,-2.03,0.07,2.75,1.03,0,">1 nonsynonymous","S41T G146V",2
"lib2","SARS-CoV-2","TATTAATAGACCCAAT",1,20.21,8.69,-2.14,0.11,3,1.03,0,">1 nonsynonymous","L60V N157E Q168A K198N",4
"lib2","SARS-CoV-2","TATTAATATAACCAGG",3,14.19,10.85,0.02,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTAATATAATGGAA",1,6.43,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TATTAATATTGTGCCT",2,7.28,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","C6L V37A I142M V182L",4
"lib2","SARS-CoV-2","TATTAATCATAGGATG",6,112.39,10.25,-0.58,0.02,2.89,1.06,0,">1 nonsynonymous","T140R P149L P169T",3
"lib2","SARS-CoV-2","TATTAATCCAAGCAAA",4,36.44,6.73,-4.11,0.47,1.5,1.06,0.04,">1 nonsynonymous","N4S S29R D59F N92V Y121M",5
"lib2","SARS-CoV-2","TATTAATCTAGTAAGG",5,25.38,6,-4.84,1.41,2.98,1.09,0,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","TATTAATGATATAAAA",2,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44K D90V F99G R124P T148I T170I",6
"lib2","SARS-CoV-2","TATTAATGCTATGAGG",11,296.78,10.23,-0.61,0.04,2.79,1.04,0,">1 nonsynonymous","D34C N110L E186T",3
"lib2","SARS-CoV-2","TATTAATTAACACGAC",11,49.77,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S69G V103F A145K",3
"lib2","SARS-CoV-2","TATTAATTAAGAGGCA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48H P82W F160V",3
"lib2","SARS-CoV-2","TATTAATTATACAACC",12,5.71,8.87,-1.96,0.28,2.48,1.24,0.03,"synonymous","",0
"lib2","SARS-CoV-2","TATTAATTGACGCGAA",3,0.07,NA,NA,NA,NA,NA,NA,"stop","R25G L95Y D112G G146*",4
"lib2","SARS-CoV-2","TATTACAAAAACAAGT",2,49.59,9.97,-0.87,0.09,2.26,1.11,0,">1 nonsynonymous","Y35A E135M",2
"lib2","SARS-CoV-2","TATTACAAAAACTATA",1,35.13,9.81,-1.03,0.09,2.51,1.01,0,">1 nonsynonymous","L5G D98G E141W",3
"lib2","SARS-CoV-2","TATTACAAAGAAGCTG",2,22.6,10.69,-0.15,0.05,2.97,1.07,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","TATTACAAATAAATAA",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89V V103E",2
"lib2","SARS-CoV-2","TATTACAACGTTGCGG",6,109.57,10.27,-0.57,0.05,2.82,1.03,0,"1 nonsynonymous","V65Q",1
"lib2","SARS-CoV-2","TATTACAATAATGGGT",4,43.74,10.83,0,0.08,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTACAATATAGATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W R127S",2
"lib2","SARS-CoV-2","TATTACAATTAGTTGA",4,0.96,NA,NA,NA,NA,NA,NA,"stop","G83* Y91A F99H T201F",4
"lib2","SARS-CoV-2","TATTACACCAGTAACG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66* N107R N157S P161N P177I",5
"lib2","SARS-CoV-2","TATTACACCGAATTAA",10,114.16,10.94,0.1,0.03,2.97,1.04,0,"1 nonsynonymous","Y39M",1
"lib2","SARS-CoV-2","TATTACACTACCGACT",2,17.28,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","A89Y E141R N157T",3
"lib2","SARS-CoV-2","TATTACAGAGTTTGCC",1,34.25,10.89,0.05,0.07,2.93,1.1,0,"1 nonsynonymous","D59S",1
"lib2","SARS-CoV-2","TATTACAGATAAACCA",2,30.74,8.66,-2.17,0.38,1.5,1,0.06,">1 nonsynonymous","A14L Y91V K132M",3
"lib2","SARS-CoV-2","TATTACAGATACATTC",6,121.71,10.48,-0.36,0.04,2.91,1.03,0,"1 nonsynonymous","P96N",1
"lib2","SARS-CoV-2","TATTACAGTGATATAT",1,17.43,9.22,-1.61,0.05,3,1.03,0,">1 nonsynonymous","I2L Y119I",2
"lib2","SARS-CoV-2","TATTACAGTTGAATTA",6,19.97,NA,NA,NA,NA,NA,NA,"stop","K48* T201R",2
"lib2","SARS-CoV-2","TATTACATATTTATGG",4,11.16,10.04,-0.8,0.17,2.62,1.21,0.01,">1 nonsynonymous","V37F Y50S S129T P191T",4
"lib2","SARS-CoV-2","TATTACATTACAATTG",6,105.5,10.78,-0.05,0.07,2.91,1.11,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","TATTACCAAACATGCG",6,0.64,NA,NA,NA,NA,NA,NA,"stop","Y93R K114S E141P T170*",4
"lib2","SARS-CoV-2","TATTACCAATCTTTCA",5,33.82,6.13,-4.7,0.54,1.5,1.12,0.01,">1 nonsynonymous","S41G T46I T55I T85L N157I T201S",6
"lib2","SARS-CoV-2","TATTACCACCGACCAA",2,0.53,NA,NA,NA,NA,NA,NA,"stop","I88* P133Q T148I F160W",4
"lib2","SARS-CoV-2","TATTACCATATATGGC",6,0,NA,NA,NA,NA,NA,NA,"stop","W23F N40C G166L T201*",4
"lib2","SARS-CoV-2","TATTACCCAACACATA",7,68.06,8.76,-2.07,0.06,1.92,1.09,0,">1 nonsynonymous","C6I K128C",2
"lib2","SARS-CoV-2","TATTACCTACTAACAT",7,148.8,10.45,-0.39,0.03,2.9,1.05,0,">1 nonsynonymous","L5P P133V",2
"lib2","SARS-CoV-2","TATTACGACATAATTA",5,4.4,NA,NA,NA,NA,NA,NA,"stop","I2Q T15G S19M V32* A42E G146T",6
"lib2","SARS-CoV-2","TATTACGATGGAAGCT",2,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P133L G155H G174V",3
"lib2","SARS-CoV-2","TATTACGGGGTCTACA",5,9.26,NA,NA,NA,NA,NA,NA,"stop","N120V N157* K198F",3
"lib2","SARS-CoV-2","TATTACGGTTAAAACA",6,12.5,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13S F44Y L122R F167C",4
"lib2","SARS-CoV-2","TATTACGTAAATAATG",2,60.11,10.78,-0.06,0.06,2.9,1.1,0,"1 nonsynonymous","K48A",1
"lib2","SARS-CoV-2","TATTACGTACGTAAGT",3,17.93,10.17,-0.66,0.16,2.75,1,0.01,">1 nonsynonymous","S41M G155L",2
"lib2","SARS-CoV-2","TATTACGTAGAGATAT",2,14.8,7.93,-2.9,0.12,2.02,1,0.02,">1 nonsynonymous","S41R Y143R H189N",3
"lib2","SARS-CoV-2","TATTACGTATGGTAAA",3,37.4,10.85,0.01,0.05,3,1.03,0,"1 nonsynonymous","V32I",1
"lib2","SARS-CoV-2","TATTACTAAAAAATAC",2,31.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6G K94Y F126I",3
"lib2","SARS-CoV-2","TATTACTAACCCTCCC",3,20.71,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","G9T V77E F134T Q144R F167Y",5
"lib2","SARS-CoV-2","TATTACTACATTAGGA",6,2.59,NA,NA,NA,NA,NA,NA,"stop","N4T Y91* V103S D137G",4
"lib2","SARS-CoV-2","TATTACTAGCATATTG",12,69.8,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G9L Y35H I88T D97V T140L F160N",6
"lib2","SARS-CoV-2","TATTACTATAGGTGAG",1,16.09,10.73,-0.11,0.23,2.59,1.02,0.02,"wildtype","",0
"lib2","SARS-CoV-2","TATTACTATTCAGCAA",1,28.31,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","A14S S36R S41A C102S K132G V153F",6
"lib2","SARS-CoV-2","TATTACTCGATATAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","I88M Y93* P161T V173C",4
"lib2","SARS-CoV-2","TATTACTGGAATGTGC",1,10.82,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","D68V P82Q K132R",3
"lib2","SARS-CoV-2","TATTACTTATTGTGAG",6,142.43,9.54,-1.29,0.08,2.7,1.05,0,">1 nonsynonymous","N4M L122S F126T N151F",4
"lib2","SARS-CoV-2","TATTACTTTTCCGGCA",5,155.18,10.89,0.06,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTAGAAAAATGGAT",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83V I104M C150P",3
"lib2","SARS-CoV-2","TATTAGAAACTTTGAC",2,3.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G155N",1
"lib2","SARS-CoV-2","TATTAGAAATAAGACA",4,36.38,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F99S Y119G P133F P149A",4
"lib2","SARS-CoV-2","TATTAGAAGATTAAAA",1,46.36,10.72,-0.12,0.06,2.93,1.07,0,">1 nonsynonymous","N4R N171S",2
"lib2","SARS-CoV-2","TATTAGAAGCATAGAA",5,13.62,8.92,-1.92,0.24,1.5,1,0.04,">1 nonsynonymous","K56W E76C N171T",3
"lib2","SARS-CoV-2","TATTAGACCACACGAG",7,140.99,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38S F126E",2
"lib2","SARS-CoV-2","TATTAGAGCCCCATAT",7,137.61,9.61,-1.22,0.03,2.91,1.09,0,">1 nonsynonymous","T55S Y119R G174N",3
"lib2","SARS-CoV-2","TATTAGATACTACGAA",6,107.98,10.8,-0.03,0.04,2.94,1.06,0,"1 nonsynonymous","P149M",1
"lib2","SARS-CoV-2","TATTAGATGAATAAAA",2,42.47,10.68,-0.16,0.05,2.93,1.04,0,"1 nonsynonymous","A14K",1
"lib2","SARS-CoV-2","TATTAGATTGAAATAT",3,0.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TATTAGATTTCAACAA",2,18.06,10.85,0.02,0.04,3,1.01,0,">1 nonsynonymous","T100L P191S",2
"lib2","SARS-CoV-2","TATTAGCAACAAATCT",6,43.8,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","P54V R124F D137Q C150G",4
"lib2","SARS-CoV-2","TATTAGCCAGTTTTTA",1,9.12,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","N13S R73L D90C G166A",4
"lib2","SARS-CoV-2","TATTAGCCGCCAAACC",9,123.85,10.77,-0.07,0.04,2.92,1.1,0,">1 nonsynonymous","T100L V153D",2
"lib2","SARS-CoV-2","TATTAGCCGTGCCGGC",5,8.42,10.66,-0.17,0.12,2.87,1.02,0.01,">1 nonsynonymous","T15D A42N L60E V77E W106R",5
"lib2","SARS-CoV-2","TATTAGCCTAATAACG",12,100,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","S69P",1
"lib2","SARS-CoV-2","TATTAGCCTACCGTTC",1,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81S P133Q",2
"lib2","SARS-CoV-2","TATTAGCCTAGACGCT",7,47.64,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D68G A81E G155C T170M G174T",5
"lib2","SARS-CoV-2","TATTAGGACAAGCATA",4,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9W N24H T140N",3
"lib2","SARS-CoV-2","TATTAGGAGCATGTAA",3,15.49,6.58,-4.26,0.44,2.26,1.33,0.02,">1 nonsynonymous","N30K I72S",2
"lib2","SARS-CoV-2","TATTAGGATAAAACAA",6,92.55,10.83,0,0.05,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTAGGATAATCCTT",9,1.43,NA,NA,NA,NA,NA,NA,"stop","R127*",1
"lib2","SARS-CoV-2","TATTAGGATTCCTAAG",1,15.87,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","P82W D98F G146A F156P",4
"lib2","SARS-CoV-2","TATTAGGCAAAAGACT",1,16.59,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","L60T V103N T140P Y143L",4
"lib2","SARS-CoV-2","TATTAGGGACAAACCA",5,132.89,10.73,-0.1,0.05,2.86,1.16,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","TATTAGGTAATAGTGT",1,23.4,6,-4.84,0.92,2.56,1.13,0.01,">1 nonsynonymous","G9K Y91K W106C P149R",4
"lib2","SARS-CoV-2","TATTAGTAGGTCATAT",8,62.96,6.06,-4.77,0.63,1.5,1.19,0.01,">1 nonsynonymous","W23V I80M L95W N120S K199V",5
"lib2","SARS-CoV-2","TATTAGTATGCCCAAA",3,1.16,NA,NA,NA,NA,NA,NA,"stop","A22M S69* T140P",3
"lib2","SARS-CoV-2","TATTAGTCAGTATCGC",17,47.05,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N13C C49F",2
"lib2","SARS-CoV-2","TATTAGTCATGAGTGT",6,0.05,NA,NA,NA,NA,NA,NA,"stop","K48* T201V",2
"lib2","SARS-CoV-2","TATTAGTCCCGCCGGA",7,97.9,8.66,-2.17,0.05,2.84,1.04,0,">1 nonsynonymous","S41A D98L Y119S",3
"lib2","SARS-CoV-2","TATTAGTCTACACATA",2,36.04,10.76,-0.08,0.07,2.88,1.15,0,"1 nonsynonymous","V153E",1
"lib2","SARS-CoV-2","TATTAGTGACTAAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R W106F",2
"lib2","SARS-CoV-2","TATTAGTGGTGCCCAA",3,30.44,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","N58K R127I",2
"lib2","SARS-CoV-2","TATTAGTGTACTCGAA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L V103G L183H",3
"lib2","SARS-CoV-2","TATTATAACGACCTAA",1,23.33,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F44R D59W L95Y F99I V115Y P177I",6
"lib2","SARS-CoV-2","TATTATAATGCAGTAT",11,141.28,10.82,-0.02,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTATAATTAGTTGT",10,63.01,6,-4.84,1.33,1.5,1.18,0.02,">1 nonsynonymous","R16T Q79T Y165K",3
"lib2","SARS-CoV-2","TATTATACAGCAATTT",1,8.16,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y35H V77W Y119A H189C",4
"lib2","SARS-CoV-2","TATTATACATACCACA",9,154.61,9.26,-1.57,0.02,2.51,1.07,0,"1 nonsynonymous","Y165I",1
"lib2","SARS-CoV-2","TATTATACGCCTCAAA",2,15.93,10.74,-0.09,0.08,2.86,1.13,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","TATTATACGCGAGTAA",1,10.86,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12S D75R Y159N P177T",4
"lib2","SARS-CoV-2","TATTATACTATGCTAC",1,0.04,NA,NA,NA,NA,NA,NA,"stop","I28W G51D I104* G155E",4
"lib2","SARS-CoV-2","TATTATACTGCCGTAT",8,0,NA,NA,NA,NA,NA,NA,"stop","L5* S36K D68V I142N",4
"lib2","SARS-CoV-2","TATTATAGAAAAAAAC",6,46.4,7.32,-3.51,0.25,1.5,1.14,0.02,">1 nonsynonymous","N64M G86M",2
"lib2","SARS-CoV-2","TATTATAGCAATGCCT",6,29.71,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54L G116Y T170A L183H",4
"lib2","SARS-CoV-2","TATTATAGCCTAAGTA",6,2.45,NA,NA,NA,NA,NA,NA,"stop","A81C W106L G155V S164*",4
"lib2","SARS-CoV-2","TATTATAGCTATACGG",2,399.17,10.32,-0.52,0.03,2.86,1.07,0,">1 nonsynonymous","K94R F160E",2
"lib2","SARS-CoV-2","TATTATAGTAAGTGTA",4,59.59,10.69,-0.14,0.06,2.82,1.21,0,"1 nonsynonymous","T140M",1
"lib2","SARS-CoV-2","TATTATATAACTATAA",5,48.61,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99A Q176R S184T",3
"lib2","SARS-CoV-2","TATTATATCCTGGGAG",8,39.82,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A67D Y93L",2
"lib2","SARS-CoV-2","TATTATATGAATCCCG",11,223.99,9.99,-0.85,0.04,2.95,1.05,0,">1 nonsynonymous","C61Q Q168T",2
"lib2","SARS-CoV-2","TATTATCAATGGGTCC",1,5.08,10.43,-0.4,0.09,3,1,0,">1 nonsynonymous","N30R N130I",2
"lib2","SARS-CoV-2","TATTATCACTAAAAAT",4,10.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R124L P133H",2
"lib2","SARS-CoV-2","TATTATCCCCTAACGT",12,18.93,NA,NA,NA,NA,NA,NA,"stop","C6L F44S D98*",3
"lib2","SARS-CoV-2","TATTATCTCCTCTAAT",10,49.26,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","I28F L57T L131R Q168F",4
"lib2","SARS-CoV-2","TATTATGAACGTAACT",2,5.42,9.45,-1.38,0.16,2.46,1,0.01,">1 nonsynonymous","N13H K132N G174T",3
"lib2","SARS-CoV-2","TATTATGAGATGCGAG",8,178.21,9.26,-1.58,0.06,2.6,1.1,0,">1 nonsynonymous","N4R Q176L",2
"lib2","SARS-CoV-2","TATTATGCAATCTTGC",4,70.84,10.22,-0.62,0.07,2.7,1.02,0,">1 nonsynonymous","T15K A81C",2
"lib2","SARS-CoV-2","TATTATGCCAATACAA",2,50.82,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L60G Y143Q G152T",3
"lib2","SARS-CoV-2","TATTATGCCAGAATTT",1,3.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K Y66I T85K P96F",4
"lib2","SARS-CoV-2","TATTATGCTTACATAA",1,14.46,10.23,-0.6,0.07,2.91,1.02,0,">1 nonsynonymous","N30W N40Y",2
"lib2","SARS-CoV-2","TATTATGGTGGTTGGT",10,79.59,10.85,0.01,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTATGTAAAGCCAG",3,48.29,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y39T K56Q D68S S113M",4
"lib2","SARS-CoV-2","TATTATGTCCGAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","R16* Y119C",2
"lib2","SARS-CoV-2","TATTATTACATATGAA",2,63.92,7.87,-2.97,0.13,2.05,1.06,0.01,">1 nonsynonymous","G83I F126S",2
"lib2","SARS-CoV-2","TATTATTAGACAAGTA",3,54.15,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V65E I142N",2
"lib2","SARS-CoV-2","TATTATTATACCGCGT",1,42.54,10.26,-0.58,0.06,2.84,1.11,0,">1 nonsynonymous","R25S L122H",2
"lib2","SARS-CoV-2","TATTATTATGCACCAA",3,47.46,9.43,-1.41,0.14,2.23,1.21,0.01,">1 nonsynonymous","N4L G155L",2
"lib2","SARS-CoV-2","TATTATTATTGCAACC",2,39.7,10.34,-0.49,0.07,2.92,1.1,0,">1 nonsynonymous","Y39R G83W",2
"lib2","SARS-CoV-2","TATTATTCAAGGTCCG",2,37.37,11.17,0.34,0.04,2.99,1,0,">1 nonsynonymous","P54K Q163L",2
"lib2","SARS-CoV-2","TATTATTCCAAGATAC",3,10.78,7.8,-3.04,0.37,1.6,1.01,0.02,">1 nonsynonymous","S41F F167H",2
"lib2","SARS-CoV-2","TATTATTCTAGTGAAT",3,0.73,NA,NA,NA,NA,NA,NA,"stop","P96N F185*",2
"lib2","SARS-CoV-2","TATTATTGATAATTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L60E A105S T201*",3
"lib2","SARS-CoV-2","TATTATTGCCTACAGG",1,25.03,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","S41L W106C R127E",3
"lib2","SARS-CoV-2","TATTATTTAAAAATGA",4,15,8.89,-1.95,0.16,1.85,1.08,0.01,">1 nonsynonymous","G9T K26S S41E A105V",4
"lib2","SARS-CoV-2","TATTATTTCGGTTGAT",3,35.87,6.59,-4.24,0.73,1.5,1.24,0.06,">1 nonsynonymous","P96L S108G",2
"lib2","SARS-CoV-2","TATTCAAACAATACAA",9,90.02,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V32L N107L F167I",3
"lib2","SARS-CoV-2","TATTCAAAGAAAGTGT",6,0.43,NA,NA,NA,NA,NA,NA,"stop","N1M A42I K198*",3
"lib2","SARS-CoV-2","TATTCAAAGCACAGTA",1,14.99,10.78,-0.05,0.09,2.89,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TATTCAACCGATCAAC",2,34.1,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5F N64H G101R P149R T201H",5
"lib2","SARS-CoV-2","TATTCAACGATTTTTC",4,61.54,10.85,0.02,0.06,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTCAACTACTGATA",9,239.15,10.25,-0.59,0.03,2.9,1.08,0,">1 nonsynonymous","G9S C61G N120M H189Y",4
"lib2","SARS-CoV-2","TATTCAATCACTCCAG",3,53.52,10.22,-0.61,0.05,2.93,1.1,0,">1 nonsynonymous","T100K G174H",2
"lib2","SARS-CoV-2","TATTCAATGGCCTAAG",4,11.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y21Q S41R Q84T P96Q E154V",5
"lib2","SARS-CoV-2","TATTCACAACCCAAAA",5,30.43,8.71,-2.13,0.07,2.77,1,0,">1 nonsynonymous","N120P Q163W",2
"lib2","SARS-CoV-2","TATTCACAGACAAATT",2,72.48,9.93,-0.91,0.09,2.49,1.02,0.01,"1 nonsynonymous","A81I",1
"lib2","SARS-CoV-2","TATTCACATACATTGA",3,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98A V103N Y143F T201R",4
"lib2","SARS-CoV-2","TATTCACCATTAGACA",5,6.94,NA,NA,NA,NA,NA,NA,"stop","V32*",1
"lib2","SARS-CoV-2","TATTCACCGGGGCCAA",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96N Y119P L183R",3
"lib2","SARS-CoV-2","TATTCACCTTTAAATC",6,56.6,8.3,-2.53,0.14,2.65,1.09,0.01,">1 nonsynonymous","F8M T55D D98N Y119K I138W G174M",6
"lib2","SARS-CoV-2","TATTCACGAAAACATC",6,1.21,NA,NA,NA,NA,NA,NA,"stop","I2* E10S G155L Q168A",4
"lib2","SARS-CoV-2","TATTCACGAATCATAT",16,1.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATTCACGCTCCGTTT",2,40,10.03,-0.8,0.1,2.54,1.15,0.01,">1 nonsynonymous","Y35C D98E",2
"lib2","SARS-CoV-2","TATTCACGGCTCAGTA",4,30.9,9.45,-1.39,0.09,1.76,1.04,0,">1 nonsynonymous","F12R A33P",2
"lib2","SARS-CoV-2","TATTCACTACTACGCA",4,63.34,10.84,0.01,0.05,2.93,1.09,0,"1 nonsynonymous","Q84S",1
"lib2","SARS-CoV-2","TATTCACTAGGTTATA",7,136.49,10.15,-0.68,0.06,2.73,1.01,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","TATTCAGAATAGTTCT",1,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G116M S147Y",2
"lib2","SARS-CoV-2","TATTCAGACAACGCAA",6,22.08,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P82Y P133R P197T",3
"lib2","SARS-CoV-2","TATTCAGAGAACTGAG",1,23.22,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N30T N64V G101N F160S",4
"lib2","SARS-CoV-2","TATTCAGCCAATTAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27P S41G A81N G155* A190I",5
"lib2","SARS-CoV-2","TATTCAGTAACGACAT",7,109.26,10.85,0.01,0.05,2.91,1.07,0,">1 nonsynonymous","V52L D90L Q163V",3
"lib2","SARS-CoV-2","TATTCAGTTTATAATA",13,97.08,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V65P S164F",2
"lib2","SARS-CoV-2","TATTCATAACACTCTC",7,72.22,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10C Y35S C61R D68I P96G",5
"lib2","SARS-CoV-2","TATTCATCAATTACCC",1,4.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33Q L38F",2
"lib2","SARS-CoV-2","TATTCATCCTATCTCA",2,33.41,6.76,-4.08,0.27,1.5,1.14,0.01,">1 nonsynonymous","V20T V37R R124K F160A",4
"lib2","SARS-CoV-2","TATTCATCTTATCGCA",6,75.49,10.13,-0.7,0.07,2.65,1,0,">1 nonsynonymous","K94N T148W",2
"lib2","SARS-CoV-2","TATTCATGATTCCTAC",1,75.15,10.63,-0.21,0.05,2.94,1.01,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","TATTCATTCAATACCA",4,53.68,10.3,-0.54,0.07,2.35,1.08,0,">1 nonsynonymous","N1Q T55R V71L D97N E154T",5
"lib2","SARS-CoV-2","TATTCCAATGCCACGT",7,151.13,6.45,-4.39,0.7,1.5,1.3,0.04,">1 nonsynonymous","D112M P133W G152H",3
"lib2","SARS-CoV-2","TATTCCAATTACTCGG",4,13.86,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P7L Y21H S43F L57M D90S K94H",6
"lib2","SARS-CoV-2","TATTCCACGCATCTAA",4,27.9,6,-4.84,1.63,1.5,1.29,0.04,">1 nonsynonymous","A33C G83E N92T",3
"lib2","SARS-CoV-2","TATTCCAGTTACAGCT",5,34.48,8.2,-2.64,0.13,2.65,1.14,0.01,">1 nonsynonymous","Y39L G146L",2
"lib2","SARS-CoV-2","TATTCCCAACTCGAAA",11,137.2,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","P82F Y93G Q176S S184E",4
"lib2","SARS-CoV-2","TATTCCCACATAGAGA",6,205.62,8.59,-2.24,0.11,1.8,1.11,0,">1 nonsynonymous","C31S Y178L",2
"lib2","SARS-CoV-2","TATTCCCATATAACTT",7,37.05,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","L57Y G101K T201L",3
"lib2","SARS-CoV-2","TATTCCCCCCTCTTGT",8,2.33,NA,NA,NA,NA,NA,NA,"stop","V37* S45V G101T A145L N151S",5
"lib2","SARS-CoV-2","TATTCCCTATCCAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13* V103K I138L",3
"lib2","SARS-CoV-2","TATTCCCTCCCCGTCT",5,38.71,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N40L C49A Y143L V181E",4
"lib2","SARS-CoV-2","TATTCCCTTATCCACG",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* W23L A89L C102I S113E V173G",6
"lib2","SARS-CoV-2","TATTCCGAGACACGGA",3,54.25,10.85,0.02,0.08,2.85,1.12,0,"1 nonsynonymous","K199L",1
"lib2","SARS-CoV-2","TATTCCGATTGACATA",2,0.14,NA,NA,NA,NA,NA,NA,"stop","K87S E135K K198*",3
"lib2","SARS-CoV-2","TATTCCGTACCAGAAT",2,9.76,10.65,-0.19,0.1,2.76,1.31,0.01,"1 nonsynonymous","K114W",1
"lib2","SARS-CoV-2","TATTCCTCACGCGTTG",16,350.66,10.32,-0.51,0.02,2.88,1.05,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","TATTCCTCTTATCAAT",7,17.46,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","G9R G86R E135S",3
"lib2","SARS-CoV-2","TATTCCTGCCAATTTC",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18W T85M G101F A105T T201G",5
"lib2","SARS-CoV-2","TATTCCTGGGGCGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","G116M R127* G174Y",3
"lib2","SARS-CoV-2","TATTCCTTTAGTAGTC",2,12.52,9.64,-1.19,0.13,2.56,1,0.01,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TATTCGAAAATGTATC",8,2.77,NA,NA,NA,NA,NA,NA,"stop","Y39* N64T",2
"lib2","SARS-CoV-2","TATTCGAACCTTGGGG",2,123.2,10.81,-0.02,0.04,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TATTCGAAGGGGGCAA",4,32.77,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","G86D N120K D137V",3
"lib2","SARS-CoV-2","TATTCGAATTCGAAAA",2,44.27,10.17,-0.67,0.05,2.74,1.1,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","TATTCGAGACTCTTAA",6,24.09,6,-4.84,1.58,1.63,1.19,0.01,">1 nonsynonymous","A89S A105P",2
"lib2","SARS-CoV-2","TATTCGAGCACATATA",1,18.57,10.2,-0.63,0.06,2.89,1.1,0,">1 nonsynonymous","I2H P169V",2
"lib2","SARS-CoV-2","TATTCGCCTTCGAGAG",2,51.95,10.88,0.04,0.06,2.9,1.1,0,">1 nonsynonymous","K56E K128T",2
"lib2","SARS-CoV-2","TATTCGCGGGGTATAA",3,0.15,NA,NA,NA,NA,NA,NA,"stop","T46S T55E Q84*",3
"lib2","SARS-CoV-2","TATTCGCTCATTCAAA",4,3.09,NA,NA,NA,NA,NA,NA,"stop","S43* V77E",2
"lib2","SARS-CoV-2","TATTCGGAGCTGATAA",6,115.45,10.61,-0.23,0.03,2.96,1.03,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","TATTCGGCCGCGCGTC",4,28.77,10.31,-0.53,0.09,2.44,1.03,0.01,">1 nonsynonymous","F62L I80L Y123F Q144E A190D",5
"lib2","SARS-CoV-2","TATTCGGCTCGAAACT",14,2.31,NA,NA,NA,NA,NA,NA,"stop","I2M E10R Y21A C61S A81V G86Y Y143*",7
"lib2","SARS-CoV-2","TATTCGTCGTGCTATC",4,63.16,9.74,-1.09,0.06,2.11,1.08,0,">1 nonsynonymous","A42V G116P Y178L",3
"lib2","SARS-CoV-2","TATTCGTTACATCGAA",5,0.76,NA,NA,NA,NA,NA,NA,"stop","F47M T55A S139* T148W",4
"lib2","SARS-CoV-2","TATTCGTTGAATGTCA",2,55.06,10.17,-0.66,0.08,2.62,1.05,0,"1 nonsynonymous","V77R",1
"lib2","SARS-CoV-2","TATTCTAAACACGCAT",1,11.37,9.42,-1.41,0.21,1.91,1.13,0.02,">1 nonsynonymous","S29Y Y39P K128T F160I C195K",5
"lib2","SARS-CoV-2","TATTCTAAACTTGGAG",1,0.44,NA,NA,NA,NA,NA,NA,"stop","C6* R25* N64S K114L",4
"lib2","SARS-CoV-2","TATTCTAACAGAAAAG",3,41.82,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","T55S A67L Y119V P133V N157R T201V",6
"lib2","SARS-CoV-2","TATTCTAACCAAATCG",1,12.03,8.64,-2.2,0.37,1.5,1.16,0.04,">1 nonsynonymous","Y21H R124K",2
"lib2","SARS-CoV-2","TATTCTAACCGCGAGA",2,30.19,10.85,0.02,0.06,2.97,1.05,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","TATTCTAACCGCGAGG",3,19.6,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","Y93R",1
"lib2","SARS-CoV-2","TATTCTACTGTCCACA",1,24.11,10.73,-0.11,0.07,2.95,1.05,0,">1 nonsynonymous","S36D T140S",2
"lib2","SARS-CoV-2","TATTCTAGGGCGCCAC",5,77.85,9.62,-1.21,0.13,1.77,1.05,0.01,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","TATTCTATAAACCCCC",3,69.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N40H N64T I88P",3
"lib2","SARS-CoV-2","TATTCTATATCTCCGT",3,20.02,9.31,-1.52,0.12,2.35,1,0.01,">1 nonsynonymous","G9K G74C",2
"lib2","SARS-CoV-2","TATTCTATGAAACGCT",2,23.93,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V32L S43G C158W",3
"lib2","SARS-CoV-2","TATTCTCAAAAAATGA",3,53.09,9.63,-1.21,0.09,2.61,1.03,0,">1 nonsynonymous","C6K V115H",2
"lib2","SARS-CoV-2","TATTCTCAAAGCGATG",2,22.22,6.13,-4.71,0.58,1.5,1.08,0.01,">1 nonsynonymous","V103K Y143I P197L",3
"lib2","SARS-CoV-2","TATTCTCAGTGCAGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L A22V R136H",3
"lib2","SARS-CoV-2","TATTCTCATAACCGTA",1,48.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G83K K94S N107S G116P",4
"lib2","SARS-CoV-2","TATTCTCATAAGCTTG",1,0.62,NA,NA,NA,NA,NA,NA,"stop","C6L G83C L162*",3
"lib2","SARS-CoV-2","TATTCTCATGATCACT",7,130.74,10.59,-0.25,0.02,2.94,1.05,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","TATTCTCCAACCCATT",1,45.43,10.81,-0.03,0.05,2.93,1.02,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TATTCTCCAATCCATT",1,0,NA,NA,NA,NA,NA,NA,"stop","N1T S41V Y119*",3
"lib2","SARS-CoV-2","TATTCTCGAACATACC",5,0.92,NA,NA,NA,NA,NA,NA,"stop","A33V G83F S113* F134S N157T",5
"lib2","SARS-CoV-2","TATTCTCTTCAACTAA",6,3.59,NA,NA,NA,NA,NA,NA,"stop","S108Y Y119* P197M",3
"lib2","SARS-CoV-2","TATTCTGAACTTAGTA",5,55.38,8.76,-2.08,0.1,1.63,1.15,0,">1 nonsynonymous","R16C S43Q V103L",3
"lib2","SARS-CoV-2","TATTCTGAACTTATAC",7,27.86,6.34,-4.5,0.34,1.5,1.09,0.01,">1 nonsynonymous","Y50V Y93F S129G",3
"lib2","SARS-CoV-2","TATTCTGAGTCTTTTC",5,43.61,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V20G F44T T85N N92G S184P",5
"lib2","SARS-CoV-2","TATTCTGGACGCCTTG",13,128.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64M S69T K94A E135T F167Q",5
"lib2","SARS-CoV-2","TATTCTTACCACAATG",2,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50N K87L S184P",3
"lib2","SARS-CoV-2","TATTCTTAGTATAAAA",2,34.12,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86S W106F I138G",3
"lib2","SARS-CoV-2","TATTCTTGGAAAAGGT",1,27.41,9.02,-1.81,0.18,1.68,1.11,0.01,">1 nonsynonymous","F17E G51N",2
"lib2","SARS-CoV-2","TATTCTTGGACGTCCA",11,1.99,NA,NA,NA,NA,NA,NA,"stop","G101* C150G",2
"lib2","SARS-CoV-2","TATTGAAAATACAGGT",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R K132N F156P",3
"lib2","SARS-CoV-2","TATTGAAACAAATTAA",13,86.59,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N30K D90P A105E G152H G172Y",5
"lib2","SARS-CoV-2","TATTGAACCAATACAA",12,80.42,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I88R A105T Y121S T140A",4
"lib2","SARS-CoV-2","TATTGAACCCTAAACA",2,18.01,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R16N F44N K56R S69R V77M",5
"lib2","SARS-CoV-2","TATTGAACGTGAATAC",1,8.5,9.44,-1.39,0.11,2.18,1.02,0.01,">1 nonsynonymous","C6I Y35D V173I",3
"lib2","SARS-CoV-2","TATTGAAGCAATTAAC",2,25.73,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36L D68G K87D F99C E135N",5
"lib2","SARS-CoV-2","TATTGAATATGTGAAG",3,0.36,NA,NA,NA,NA,NA,NA,"stop","V71* G83W D98* C102I R127G C158W",6
"lib2","SARS-CoV-2","TATTGACACAGCTTGT",1,4.66,NA,NA,NA,NA,NA,NA,"stop","Y39L W106* N118M F156E Q176*",5
"lib2","SARS-CoV-2","TATTGACCTATCGAGG",4,142.9,10.85,0.01,0.03,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTGAGCACAATTCG",2,32.23,10.6,-0.24,0.08,2.89,1.13,0,">1 nonsynonymous","K56V N120R",2
"lib2","SARS-CoV-2","TATTGAGGAAAACCCA",7,57.52,8.36,-2.48,0.13,2.1,1.09,0.01,">1 nonsynonymous","S53Y G117L S164M",3
"lib2","SARS-CoV-2","TATTGAGGATCCCAAA",6,75.47,8.97,-1.86,0.18,1.7,1.18,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","TATTGAGTAAGACGCA",2,33.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T46G S108A L122V R136Y",4
"lib2","SARS-CoV-2","TATTGAGTCCCAGAAG",5,90.31,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F8S L38S T100L F134V",4
"lib2","SARS-CoV-2","TATTGAGTGAGATATA",1,1.91,NA,NA,NA,NA,NA,NA,"stop","N30S Y39* T63S T85E F126H T201N",6
"lib2","SARS-CoV-2","TATTGAGTTATAAACA",5,110.51,10.79,-0.04,0.05,2.89,1.11,0,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","TATTGATAATCTTAGA",6,2.28,NA,NA,NA,NA,NA,NA,"stop","I2F L57* P96L D137A P169H P197A",6
"lib2","SARS-CoV-2","TATTGATAGAAAACTG",15,81.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","P96M L111A G117C Q168P",4
"lib2","SARS-CoV-2","TATTGATATAAATTAC",7,63.16,10.08,-0.75,0.03,2.89,1.02,0,"1 nonsynonymous","C6Q",1
"lib2","SARS-CoV-2","TATTGATCGATAAAAA",7,25.03,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","N92W G196L",2
"lib2","SARS-CoV-2","TATTGATCTAGAATGC",12,171.22,10.63,-0.21,0.03,2.96,1.05,0,">1 nonsynonymous","C61E T85A D97K",3
"lib2","SARS-CoV-2","TATTGATGACCTAAAT",11,119.12,10.78,-0.06,0.04,2.92,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTGATGAGGTTGTC",10,0.83,NA,NA,NA,NA,NA,NA,"stop","L60* S129N",2
"lib2","SARS-CoV-2","TATTGATGGTTACCCA",12,1.47,NA,NA,NA,NA,NA,NA,"stop","Y50* R73T K132T G174V C195S",5
"lib2","SARS-CoV-2","TATTGATTACAATGAC",6,96.03,7.74,-3.1,0.09,2,1.08,0,">1 nonsynonymous","E10L C61F Y119A F156T",4
"lib2","SARS-CoV-2","TATTGCAAAGTGTAAG",3,118.36,10.12,-0.71,0.08,2.53,1,0,">1 nonsynonymous","D34Y T55L T100S L122S",4
"lib2","SARS-CoV-2","TATTGCAACACTTTAT",3,0,NA,NA,NA,NA,NA,NA,"stop","L38W L57* G146K",3
"lib2","SARS-CoV-2","TATTGCAACAGCCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","F8T F17* T55* V77* L188I",5
"lib2","SARS-CoV-2","TATTGCACGATTTTTT",5,143.96,10.7,-0.14,0.05,2.92,1.06,0,"1 nonsynonymous","S19P",1
"lib2","SARS-CoV-2","TATTGCACGGATGAGC",1,0.17,NA,NA,NA,NA,NA,NA,"stop","G9* C61R L131P S164L",4
"lib2","SARS-CoV-2","TATTGCATATATATCT",23,349.14,10.69,-0.14,0.03,2.92,1.05,0,">1 nonsynonymous","Y123F I138L T170N",3
"lib2","SARS-CoV-2","TATTGCATTATGCGAT",10,77.78,10.59,-0.25,0.05,2.9,1.09,0,"1 nonsynonymous","P96G",1
"lib2","SARS-CoV-2","TATTGCCACACAAATA",3,12.56,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","I28P Y39V T100R",3
"lib2","SARS-CoV-2","TATTGCCAGTCTTTAT",3,60.11,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S19A Y39E Y50I L60F R73S",5
"lib2","SARS-CoV-2","TATTGCCATCTGAAAT",1,1.69,NA,NA,NA,NA,NA,NA,"stop","V37F T100F N107M S129F P169* T201F",6
"lib2","SARS-CoV-2","TATTGCCCAAATGCAT",3,0.9,NA,NA,NA,NA,NA,NA,"stop","I80S Y91* W106R Q176L",4
"lib2","SARS-CoV-2","TATTGCCCGATCTCGA",1,24.77,10.53,-0.31,0.07,2.89,1.1,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","TATTGCCCTAGAATCT",6,79.37,9.03,-1.81,0.05,2.86,1.09,0,">1 nonsynonymous","A14T N157D",2
"lib2","SARS-CoV-2","TATTGCCCTGGATTGG",3,77.91,10.87,0.04,0.06,2.88,1.13,0,"1 nonsynonymous","N1K",1
"lib2","SARS-CoV-2","TATTGCCGAACATACG",1,5.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D G155C",2
"lib2","SARS-CoV-2","TATTGCCGGGTCGAAG",11,101.21,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D112Y Y143W P149Q",3
"lib2","SARS-CoV-2","TATTGCGACATTACGT",4,16.93,10.01,-0.82,0.18,2.2,1.06,0.03,">1 nonsynonymous","T63F A105G",2
"lib2","SARS-CoV-2","TATTGCGACTCACGTG",5,67.77,10.79,-0.04,0.05,3,1.01,0,">1 nonsynonymous","V77L D98E",2
"lib2","SARS-CoV-2","TATTGCGCCAACCACA",3,24.68,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F17L V103A Y119P",3
"lib2","SARS-CoV-2","TATTGCGGCGTTATCA",8,34.41,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","D68E K94V F99P",3
"lib2","SARS-CoV-2","TATTGCGTAATTCCTG",4,27.89,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","Y21D F99D",2
"lib2","SARS-CoV-2","TATTGCTATGATATAT",14,429.04,9.55,-1.28,0.05,1.87,1.04,0,">1 nonsynonymous","G9L T63G Q84W",3
"lib2","SARS-CoV-2","TATTGCTTAGCAAGTT",3,33.25,10.88,0.05,0.06,2.96,1.06,0,"1 nonsynonymous","V37D",1
"lib2","SARS-CoV-2","TATTGCTTTATTATAA",1,5.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86A T100S D112A P177M",4
"lib2","SARS-CoV-2","TATTGGAGAAGATCCC",5,34.8,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F70S P149M V173D",3
"lib2","SARS-CoV-2","TATTGGCAATGTCATG",1,4.13,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATTGGCACATTAGTG",6,173.96,10.79,-0.05,0.05,2.96,1.04,0,">1 nonsynonymous","L5N G116P",2
"lib2","SARS-CoV-2","TATTGGCCGTTTAGAA",4,8.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K87T F99K",2
"lib2","SARS-CoV-2","TATTGGGATCATACGG",3,8.64,6,-4.84,2,1.5,1.23,0.02,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","TATTGGTGCAAATCCA",5,41.75,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T85A F99K Y123N T148S",4
"lib2","SARS-CoV-2","TATTGGTTCAAATGCA",6,49.63,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","R179W",1
"lib2","SARS-CoV-2","TATTGGTTGAAACAAA",3,16.52,6.41,-4.42,0.4,1.85,1.11,0.01,">1 nonsynonymous","Y35G A105V P133F",3
"lib2","SARS-CoV-2","TATTGTAAACGAAATA",3,85.15,10.21,-0.63,0.05,2.87,1.05,0,">1 nonsynonymous","T100H G152K F160D",3
"lib2","SARS-CoV-2","TATTGTACAGCTCACA",4,98.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T85R D90C R124H Q176V",4
"lib2","SARS-CoV-2","TATTGTACAGGCAATA",5,0.4,NA,NA,NA,NA,NA,NA,"stop","S19V G74F E135W K198*",4
"lib2","SARS-CoV-2","TATTGTACCGGTCATG",4,68.39,6.29,-4.55,0.63,1.5,1.2,0.02,">1 nonsynonymous","S19T C61S S69K G86M F99D G117N R124F V173R",8
"lib2","SARS-CoV-2","TATTGTACTTCTCTCC",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K T201H",2
"lib2","SARS-CoV-2","TATTGTACTTTCAAGG",6,41.84,6.16,-4.68,1.03,1.5,1.22,0.03,">1 nonsynonymous","S45L K94S",2
"lib2","SARS-CoV-2","TATTGTAGATTAGCAA",3,38.87,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T15S V20P K56T A81R G117D G152N",6
"lib2","SARS-CoV-2","TATTGTATGAACAAAT",10,58.83,6.49,-4.35,0.45,1.5,1.16,0.02,">1 nonsynonymous","S19W D97S",2
"lib2","SARS-CoV-2","TATTGTCCAAATAGAT",1,2.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","TATTGTCCAACACTCG",9,154.39,10.04,-0.79,0.02,2.95,1.05,0,">1 nonsynonymous","V52L N118D L187N",3
"lib2","SARS-CoV-2","TATTGTCCTAGGAAAA",3,75.63,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5S T63N G86N G101L N110A I138F",6
"lib2","SARS-CoV-2","TATTGTCTATGCATCG",2,7.79,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C6L F17K",2
"lib2","SARS-CoV-2","TATTGTGACGTATAGA",6,35.82,9.64,-1.2,0.15,1.98,1.03,0.01,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","TATTGTGCAATAACAG",5,68.51,10.76,-0.07,0.04,2.94,1.05,0,">1 nonsynonymous","N24S S41R",2
"lib2","SARS-CoV-2","TATTGTGCTCCCACGG",3,55.58,10.93,0.1,0.04,2.93,1.07,0,"1 nonsynonymous","T100V",1
"lib2","SARS-CoV-2","TATTGTTTATATAGAA",7,64.2,10.54,-0.3,0.03,2.96,1.01,0,">1 nonsynonymous","T85M N171S",2
"lib2","SARS-CoV-2","TATTGTTTATTTTGAA",8,194.69,10.18,-0.65,0.06,2.56,1.05,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","TATTGTTTGGGTGTCA",10,641.04,10.28,-0.55,0.02,2.96,1.05,0,">1 nonsynonymous","Y35F C61H G174Q",3
"lib2","SARS-CoV-2","TATTTAAACTTATAAA",2,27.37,6.82,-4.02,0.23,1.65,1.12,0.01,">1 nonsynonymous","K87S D137R S184V",3
"lib2","SARS-CoV-2","TATTTAAATCAACCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F8R C49L N107I G146K Y178*",5
"lib2","SARS-CoV-2","TATTTAACAAGATTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A18K G51F C61Y G86H Y91* W106F",6
"lib2","SARS-CoV-2","TATTTAACATAAAATT",4,100.45,8.15,-2.69,0.16,1.82,1.07,0.01,">1 nonsynonymous","F12Y K87T K114P N151R",4
"lib2","SARS-CoV-2","TATTTAACCTATAGAT",5,117.24,9.9,-0.94,0.06,2.78,1,0,">1 nonsynonymous","V52D Y121L P197M",3
"lib2","SARS-CoV-2","TATTTAACGGTTCGTC",1,38.67,10.71,-0.12,0.03,2.94,1.07,0,">1 nonsynonymous","I2D T63G N120G",3
"lib2","SARS-CoV-2","TATTTAACTATTCAGT",3,7.99,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","F17C P82K T100G",3
"lib2","SARS-CoV-2","TATTTAAGCAACAGAG",1,9.92,6.92,-3.92,0.41,2.17,1.13,0.04,">1 nonsynonymous","A14S K128S G146L",3
"lib2","SARS-CoV-2","TATTTAAGCCACCTGG",5,1.6,NA,NA,NA,NA,NA,NA,"stop","C61* A105I K198V",3
"lib2","SARS-CoV-2","TATTTAAGGAAAAAAT",5,2.97,NA,NA,NA,NA,NA,NA,"stop","T3L G9N A22* Y121M",4
"lib2","SARS-CoV-2","TATTTAATATATAACC",3,16.42,6.21,-4.63,0.85,1.74,1.22,0.03,">1 nonsynonymous","F8Q K56M F134T",3
"lib2","SARS-CoV-2","TATTTAATATTCTCAC",8,208.12,10.7,-0.14,0.03,2.9,1.09,0,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","TATTTAATCAAATGGA",2,18.01,6,-4.84,2,3,1.09,0,">1 nonsynonymous","E154C F167N",2
"lib2","SARS-CoV-2","TATTTAATCACTCATA",2,5.51,9.26,-1.57,0.34,1.6,1.03,0.06,">1 nonsynonymous","F17Q L162V",2
"lib2","SARS-CoV-2","TATTTACACACGTGCT",2,36.5,6,-4.84,2,3,1.18,0,">1 nonsynonymous","I88A R124S P149E",3
"lib2","SARS-CoV-2","TATTTACACCCTTGCT",3,93.8,6,-4.84,2,3,1.09,0,">1 nonsynonymous","D90I V115I Y159S",3
"lib2","SARS-CoV-2","TATTTACAGAATGTCC",3,83.12,8.94,-1.89,0.09,2.57,1.1,0,">1 nonsynonymous","P7T V32R G74R",3
"lib2","SARS-CoV-2","TATTTACCACTCAATG",1,5.82,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V32I G101I D112G G117R",4
"lib2","SARS-CoV-2","TATTTACCCCGAATCA",2,0.84,NA,NA,NA,NA,NA,NA,"stop","L60V A81C D90* F99I",4
"lib2","SARS-CoV-2","TATTTACCCCGGTATA",8,97.57,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A33G S45I W106V D112S V173L",5
"lib2","SARS-CoV-2","TATTTACCCGAGGACA",4,17.75,6.64,-4.2,0.62,1.5,1.1,0.04,">1 nonsynonymous","A33R G117F E154L",3
"lib2","SARS-CoV-2","TATTTACGCTTGATAA",3,8.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9A L183G",2
"lib2","SARS-CoV-2","TATTTACGTCGGCCTT",9,71.97,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","A33P I88S H189C P197T",4
"lib2","SARS-CoV-2","TATTTACGTCTGTAAT",2,24.56,6,-4.84,2,3,1.28,0.04,">1 nonsynonymous","F47R N107W T201R",3
"lib2","SARS-CoV-2","TATTTACTAGCAGGAG",9,146.65,7.76,-3.07,0.14,1.5,1.12,0.01,">1 nonsynonymous","V37G G152N P161M",3
"lib2","SARS-CoV-2","TATTTACTATAGCGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67S I138L",2
"lib2","SARS-CoV-2","TATTTACTATCATGCT",1,10.56,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TATTTACTCCGATAAA",10,243.47,6.59,-4.25,0.18,1.5,1.15,0,">1 nonsynonymous","L5N L125K F156N",3
"lib2","SARS-CoV-2","TATTTACTCTACTGCA",6,70.51,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L5F T46Y G83V N92I",4
"lib2","SARS-CoV-2","TATTTACTTAAGGAAG",2,27.78,9.11,-1.73,0.12,1.77,1.02,0.01,">1 nonsynonymous","E10V A42Y G83I",3
"lib2","SARS-CoV-2","TATTTAGACCAATATT",1,12.89,10.18,-0.65,0.1,2.8,1.09,0.01,">1 nonsynonymous","V32R D90L",2
"lib2","SARS-CoV-2","TATTTAGAGCACAAAA",3,22.76,8.35,-2.48,0.16,2.06,1.14,0.01,">1 nonsynonymous","G9H T100N I142S V173W A192V",5
"lib2","SARS-CoV-2","TATTTAGCAGGAGAAA",2,10.25,10,-0.83,0.11,2.73,1.26,0.01,">1 nonsynonymous","I80V D98H V173Y",3
"lib2","SARS-CoV-2","TATTTAGCCGAGCGCT",9,25.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D97N C102F G146P E186P",4
"lib2","SARS-CoV-2","TATTTAGGAAAAGACT",3,28.11,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R25M R127D Y178H",3
"lib2","SARS-CoV-2","TATTTAGGCAAGGTAT",8,91.14,9.78,-1.05,0.09,2.38,1.11,0,">1 nonsynonymous","D59L K114F P149Y",3
"lib2","SARS-CoV-2","TATTTAGTAACAACAA",8,106.67,10.77,-0.07,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTTAGTCAGAATTA",6,18.72,10.23,-0.61,0.08,2.79,1.16,0,">1 nonsynonymous","A18K L122G P149T",3
"lib2","SARS-CoV-2","TATTTAGTTATAAGTA",5,27.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V11S A33T D68N L122S I142Q",5
"lib2","SARS-CoV-2","TATTTATAACCGATTT",1,39.98,10.82,-0.02,0.05,2.99,1.01,0,"1 nonsynonymous","Y35I",1
"lib2","SARS-CoV-2","TATTTATAATTTCCCT",2,43.34,10.78,-0.06,0.05,2.91,1.09,0,"1 nonsynonymous","N40Q",1
"lib2","SARS-CoV-2","TATTTATAGGACAGTG",10,116.52,8.25,-2.58,0.16,2.02,1.08,0.01,">1 nonsynonymous","D90R N118D S129P",3
"lib2","SARS-CoV-2","TATTTATATACTGATG",2,42.15,8.21,-2.63,0.19,1.77,1.16,0.01,">1 nonsynonymous","D97W Y165V",2
"lib2","SARS-CoV-2","TATTTATATGCTTATA",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W N107P",2
"lib2","SARS-CoV-2","TATTTATATTAAGCAT",3,24.12,10.39,-0.44,0.06,2.71,1.29,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","TATTTATCAAACGCAA",3,52.78,9.24,-1.59,0.05,1.98,1.09,0,">1 nonsynonymous","G86S G146S",2
"lib2","SARS-CoV-2","TATTTATCAAGAGTAA",7,43.4,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T63V F99K",2
"lib2","SARS-CoV-2","TATTTATCCAAGGTGT",2,25.69,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y35L T46A V103N T140L",4
"lib2","SARS-CoV-2","TATTTATCCACTCGGT",15,87.53,9.38,-1.46,0.14,1.68,1.08,0.01,">1 nonsynonymous","K26E P96Q",2
"lib2","SARS-CoV-2","TATTTATCCCTACTTT",13,145.37,8.61,-2.22,0.1,2.64,1.08,0,">1 nonsynonymous","G9S Y119L S129L",3
"lib2","SARS-CoV-2","TATTTATCCGAAGTAT",2,8.68,6,-4.84,2,1.64,1.17,0.02,">1 nonsynonymous","C49Q Y121S",2
"lib2","SARS-CoV-2","TATTTATCGAAAAACA",7,43.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10K G51K F99L R127Y T201M",5
"lib2","SARS-CoV-2","TATTTATCTAAATTTC",2,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5K A105V",2
"lib2","SARS-CoV-2","TATTTATTCGCTGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98W F167E",2
"lib2","SARS-CoV-2","TATTTATTGCACTTTG",1,9.89,10.87,0.03,0.12,3,1.02,0.01,">1 nonsynonymous","G83S P197H",2
"lib2","SARS-CoV-2","TATTTCAACGAAAGCC",6,38.35,8.6,-2.23,0.07,2.53,1.12,0,">1 nonsynonymous","F70M Y119T I138V",3
"lib2","SARS-CoV-2","TATTTCAATACACAGG",7,87.64,10.83,-0.01,0.06,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TATTTCACCAATTGAT",8,25.76,6.55,-4.29,0.27,1.5,1.07,0.01,">1 nonsynonymous","E10G L38R G101L V182D",4
"lib2","SARS-CoV-2","TATTTCACCCGTACGT",24,65.18,6.23,-4.6,0.87,1.5,1.26,0.04,">1 nonsynonymous","A33I W106M Q176V",3
"lib2","SARS-CoV-2","TATTTCAGATACTAGT",7,104.53,8.74,-2.1,0.06,1.82,1.07,0,">1 nonsynonymous","Y39G D112L N130A",3
"lib2","SARS-CoV-2","TATTTCAGTTCCAAGT",6,230.32,10.14,-0.7,0.07,2.6,1.03,0,">1 nonsynonymous","V52D L122E",2
"lib2","SARS-CoV-2","TATTTCATGCATCCTA",4,132.62,10.57,-0.27,0.03,2.97,1.03,0,">1 nonsynonymous","N24I Y35L",2
"lib2","SARS-CoV-2","TATTTCCAAAAATAGA",13,163.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86N G146Y G152I",3
"lib2","SARS-CoV-2","TATTTCCATCTAGTCT",2,35.87,10.85,0.01,0.06,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTTCCCAGTCTATA",7,92.74,10.7,-0.13,0.05,2.99,1.04,0,"1 nonsynonymous","I138A",1
"lib2","SARS-CoV-2","TATTTCCCGGCTTCCT",3,84.67,10.58,-0.25,0.02,2.94,1.02,0,"1 nonsynonymous","T15V",1
"lib2","SARS-CoV-2","TATTTCCGTATTCCTA",4,96.96,10.79,-0.05,0.03,2.97,1.05,0,">1 nonsynonymous","V65L P149R",2
"lib2","SARS-CoV-2","TATTTCCTTCTTTATA",2,60.03,10.34,-0.49,0.05,2.92,1.04,0,"1 nonsynonymous","A14I",1
"lib2","SARS-CoV-2","TATTTCGAGTAATCGT",5,1.28,NA,NA,NA,NA,NA,NA,"stop","N40V K48L Y93* G101M",4
"lib2","SARS-CoV-2","TATTTCGGCGGCTATA",1,9.76,8.32,-2.52,0.31,1.95,1.15,0.01,">1 nonsynonymous","T15W E154N F160C",3
"lib2","SARS-CoV-2","TATTTCGGGAAATTAG",6,72.49,10.06,-0.77,0.04,2.94,1.03,0,">1 nonsynonymous","E141K Y175H",2
"lib2","SARS-CoV-2","TATTTCTAAAATAAAG",1,4.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","TATTTCTATGTGTATG",1,9.75,10.07,-0.77,0.28,2.73,1.27,0.02,"1 nonsynonymous","N118A",1
"lib2","SARS-CoV-2","TATTTCTCGTACGGGT",2,2.3,NA,NA,NA,NA,NA,NA,"stop","T3D F44D S129R Y175N S184*",5
"lib2","SARS-CoV-2","TATTTCTCTAGCAATG",4,29.4,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N92M S113D",2
"lib2","SARS-CoV-2","TATTTCTCTATTGAAT",3,44.56,10.57,-0.26,0.06,2.94,1.08,0,"1 nonsynonymous","T15L",1
"lib2","SARS-CoV-2","TATTTCTGAACGCCAT",5,27.82,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","I104S D112A Y119N",3
"lib2","SARS-CoV-2","TATTTGAATCATAACT",11,705.66,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61R G86M I138N",3
"lib2","SARS-CoV-2","TATTTGACAAATGCGA",2,68.08,9.06,-1.78,0.06,3,1.03,0,">1 nonsynonymous","F126W Y143L",2
"lib2","SARS-CoV-2","TATTTGACAAGTTATA",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A81R K128N Y143E",4
"lib2","SARS-CoV-2","TATTTGACACACCAAA",2,22.53,10.85,0.01,0.06,2.95,1.06,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","TATTTGACTTCAACCC",6,208.27,8.01,-2.83,0.16,1.5,1.09,0.01,">1 nonsynonymous","T55H L60M N157S P177S",4
"lib2","SARS-CoV-2","TATTTGAGCAAGAAAA",2,30.03,10.93,0.09,0.05,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TATTTGAGCCAAAAAT",3,105.54,10.81,-0.02,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTTGATGGTGTCCC",16,5.41,NA,NA,NA,NA,NA,NA,"stop","T3L S45R V103* P149S",4
"lib2","SARS-CoV-2","TATTTGCCACTTCTAA",5,14.14,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","W23E L57M V103G",3
"lib2","SARS-CoV-2","TATTTGCCGAATTTAT",17,231.59,9.75,-1.08,0.07,2.14,1.06,0,">1 nonsynonymous","S36C G116P Q144S",3
"lib2","SARS-CoV-2","TATTTGCGATATGAAA",6,18.04,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D90C A105D Y175V",3
"lib2","SARS-CoV-2","TATTTGCTAGACGACG",4,4,NA,NA,NA,NA,NA,NA,"stop","Y21S I88* P96F Y165C",4
"lib2","SARS-CoV-2","TATTTGCTGTGGACTC",4,38.93,6.82,-4.01,0.36,1.5,1.13,0.03,">1 nonsynonymous","G117F Y165L",2
"lib2","SARS-CoV-2","TATTTGCTTAGAATGG",7,118.54,10.49,-0.34,0.03,2.92,1.04,0,">1 nonsynonymous","Y35W N40L V52A K128D",4
"lib2","SARS-CoV-2","TATTTGGAATATGGCC",3,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I Y50E T140P",3
"lib2","SARS-CoV-2","TATTTGGTAAGCTTAG",20,298.47,10.5,-0.34,0.04,2.87,1.08,0,">1 nonsynonymous","S139D G174S",2
"lib2","SARS-CoV-2","TATTTGGTACGTGTAC",8,0.62,NA,NA,NA,NA,NA,NA,"stop","L5R N40T I142E K199*",4
"lib2","SARS-CoV-2","TATTTGTAAATACAAC",4,65.23,10.11,-0.73,0.1,2.75,1.04,0,">1 nonsynonymous","F8V S36G V173R",3
"lib2","SARS-CoV-2","TATTTGTAACAACTAA",2,26.16,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","L5K D97E V103F E135R L187P",5
"lib2","SARS-CoV-2","TATTTGTAATATATAC",7,79.49,9.72,-1.11,0.03,2.93,1.07,0,"1 nonsynonymous","R73A",1
"lib2","SARS-CoV-2","TATTTGTCATACATTA",2,25.97,10.56,-0.28,0.07,2.93,1.02,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","TATTTGTTACGTCAAT",1,68.54,10.67,-0.17,0.05,2.92,1.1,0,">1 nonsynonymous","F99W T148S",2
"lib2","SARS-CoV-2","TATTTGTTGGGTAATA",1,9.4,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","E10V N58Y G86Y I104L T148I N157Y",6
"lib2","SARS-CoV-2","TATTTGTTGTTTCGAA",8,116.81,10.73,-0.1,0.06,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TATTTGTTTCGAAAAA",2,47.59,10.77,-0.06,0.05,2.91,1.1,0,"1 nonsynonymous","N1L",1
"lib2","SARS-CoV-2","TATTTTAACTATAATT",1,53.63,9.85,-0.99,0.07,2.23,1,0,">1 nonsynonymous","I2V V11L R73K D98W T201G",5
"lib2","SARS-CoV-2","TATTTTAATCGCCCAG",9,56.46,8.42,-2.41,0.25,1.5,1.23,0.03,">1 nonsynonymous","A81C F99L T201N",3
"lib2","SARS-CoV-2","TATTTTAGAACCAAAA",8,54.64,7.88,-2.95,0.19,1.5,1.09,0.02,">1 nonsynonymous","F12Q S19G",2
"lib2","SARS-CoV-2","TATTTTAGATAACTCA",13,57.68,8.12,-2.72,0.23,1.82,1.18,0.02,">1 nonsynonymous","C49V C61T Q168M T201V",4
"lib2","SARS-CoV-2","TATTTTAGGTAGCAGA",3,188.79,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V153A F160A P177F",3
"lib2","SARS-CoV-2","TATTTTATACCGTCGA",1,33.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","P177Y T201M",2
"lib2","SARS-CoV-2","TATTTTATTTTGACAT",2,23.83,9.69,-1.15,0.26,1.5,1,0.04,">1 nonsynonymous","C6G G51A V153W",3
"lib2","SARS-CoV-2","TATTTTCAAAACACTT",7,26.72,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","P7F V103Y E135L",3
"lib2","SARS-CoV-2","TATTTTCAAAAGGATT",5,94.84,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G9L V20L D68V G116L",4
"lib2","SARS-CoV-2","TATTTTCAATTTTACG",6,26.06,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9L F99H V103Y I142F",4
"lib2","SARS-CoV-2","TATTTTCACAACGAGT",5,62.99,6.31,-4.52,0.7,1.5,1.24,0.03,">1 nonsynonymous","A81S N107L",2
"lib2","SARS-CoV-2","TATTTTCACAGGAATA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F8L A14* L131W D137A",4
"lib2","SARS-CoV-2","TATTTTCACCTAACCA",5,65.44,10.9,0.06,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTTTCCACCTCTCG",1,3.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107Q",1
"lib2","SARS-CoV-2","TATTTTCCGAATGTCT",5,1.57,NA,NA,NA,NA,NA,NA,"stop","I2M D68P I104* G117L G146R",5
"lib2","SARS-CoV-2","TATTTTCTATGCATCG",2,1.1,NA,NA,NA,NA,NA,NA,"stop","V37* Q84L",2
"lib2","SARS-CoV-2","TATTTTCTGTCTTTCA",4,12.71,10.96,0.13,0.08,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TATTTTGTATTTGAAC",3,3.8,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TATTTTGTCAAAGGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S A105F S139T F160T K198Y",5
"lib2","SARS-CoV-2","TATTTTTAAAAGCATT",1,41.05,8.3,-2.54,0.15,2.14,1.14,0.01,"1 nonsynonymous","S113P",1
"lib2","SARS-CoV-2","TCAAAAAAACACGATG",3,135.57,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10V I28T C61R Y121D T201L",5
"lib2","SARS-CoV-2","TCAAAAAAACCCCGGA",5,33.48,10.81,-0.02,0.04,2.98,1.03,0,"1 nonsynonymous","L122V",1
"lib2","SARS-CoV-2","TCAAAAAAATCTATAA",3,12.87,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6L T15D D137R V180G",4
"lib2","SARS-CoV-2","TCAAAAAAATCTTGAA",10,56.2,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N58K P96T V103L K114I N130E",5
"lib2","SARS-CoV-2","TCAAAAAAGAGTTTGA",3,17.22,10.78,-0.05,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAAAAGCTCCATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20G G83I",2
"lib2","SARS-CoV-2","TCAAAAAATCTTTATT",8,5.22,NA,NA,NA,NA,NA,NA,"stop","N1I I28* N107P Y123I",4
"lib2","SARS-CoV-2","TCAAAAAATGAACATT",1,41.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10W G86V",2
"lib2","SARS-CoV-2","TCAAAAAATGAGGTGT",2,10.63,6,-4.84,2,3,1.08,0,">1 nonsynonymous","C6T C31G S69K N118P D137G",5
"lib2","SARS-CoV-2","TCAAAAAATTCCCTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31Y P54S W106V L122* F185*",5
"lib2","SARS-CoV-2","TCAAAAACACACACAA",3,60.06,10.69,-0.14,0.1,2.87,1.07,0,">1 nonsynonymous","L5G N130S",2
"lib2","SARS-CoV-2","TCAAAAACATCACGAT",5,64.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K132T E141L Y165E",3
"lib2","SARS-CoV-2","TCAAAAACCCGTTCCG",9,1.93,NA,NA,NA,NA,NA,NA,"stop","V37E T55V R127T T140* Q176L K198P",6
"lib2","SARS-CoV-2","TCAAAAACTACAACCT",17,10.69,NA,NA,NA,NA,NA,NA,"stop","D59S D98H Y119T R124*",4
"lib2","SARS-CoV-2","TCAAAAACTAGGTTGA",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18Y D137Y",2
"lib2","SARS-CoV-2","TCAAAAACTAGTAATT",14,171.33,8.44,-2.39,0.1,2.56,1.06,0,">1 nonsynonymous","Y39L S113P",2
"lib2","SARS-CoV-2","TCAAAAACTCATAACG",2,45.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46N Q163V",2
"lib2","SARS-CoV-2","TCAAAAAGACAACATT",2,19.17,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","E10C T15Y T63V L162S",4
"lib2","SARS-CoV-2","TCAAAAAGATGTTTTC",4,11.46,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G51L N58T K128T Y165F N171L",5
"lib2","SARS-CoV-2","TCAAAAAGATTTGTTA",4,43.4,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","P96F Y121K S139W",3
"lib2","SARS-CoV-2","TCAAAAAGGACGTAGG",1,6.08,7.66,-3.18,0.49,1.89,1.1,0.02,">1 nonsynonymous","N40H D90G Y123V V173F",4
"lib2","SARS-CoV-2","TCAAAAAGGACTCACA",11,26.95,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib2","SARS-CoV-2","TCAAAAAGTAACATCG",11,143.71,9.61,-1.23,0.03,2.85,1.09,0,">1 nonsynonymous","Q84R A145R",2
"lib2","SARS-CoV-2","TCAAAAAGTACGCAAG",14,271.98,10.2,-0.63,0.04,2.69,1.05,0,">1 nonsynonymous","S41W I80L",2
"lib2","SARS-CoV-2","TCAAAAAGTCTTGAAC",3,47.54,6,-4.84,1.41,1.5,1.23,0.02,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","TCAAAAATATTGGAAC",9,25.88,6,-4.84,2,1.75,1.31,0.03,">1 nonsynonymous","N30L A105N G174R",3
"lib2","SARS-CoV-2","TCAAAAATCCATCCTA",8,117.51,10.83,-0.01,0.03,2.95,1.06,0,">1 nonsynonymous","T3K T55V",2
"lib2","SARS-CoV-2","TCAAAAATCGATCATT",1,13.44,10.39,-0.44,0.08,2.97,1,0,">1 nonsynonymous","I2P E10R T55F",3
"lib2","SARS-CoV-2","TCAAAAATGAATGCCT",4,112.53,10.01,-0.82,0.05,2.84,1.04,0,">1 nonsynonymous","C6T P149T",2
"lib2","SARS-CoV-2","TCAAAAATGGGCCGTT",3,52.93,6.2,-4.64,0.72,1.5,1.31,0.02,">1 nonsynonymous","K94A F99V",2
"lib2","SARS-CoV-2","TCAAAAATGGTAGCAA",4,3.14,NA,NA,NA,NA,NA,NA,"stop","C6* N171F T201D",3
"lib2","SARS-CoV-2","TCAAAAATGTATCCAC",6,85.93,10.8,-0.03,0.06,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAAATTACCTAAT",1,20.49,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","Y35A V77L C158H F167A G174P",5
"lib2","SARS-CoV-2","TCAAAAATTAGGTAGA",3,0,NA,NA,NA,NA,NA,NA,"stop","Y35I G83* R124L",3
"lib2","SARS-CoV-2","TCAAAAATTTCGACAG",7,45.39,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2C N40S N110G R127W",4
"lib2","SARS-CoV-2","TCAAAACACAAAAGTG",6,15.21,6,-4.84,0.45,2.37,1.06,0,">1 nonsynonymous","P133L S139I F167I T201A",4
"lib2","SARS-CoV-2","TCAAAACACCCTAGCC",5,63.34,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6V G83A G117R G155Q",4
"lib2","SARS-CoV-2","TCAAAACACGAATGAT",1,2.33,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","TCAAAACACTTGTCGA",6,38.69,NA,NA,NA,NA,NA,0.18,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","TCAAAACAGACCCAAA",9,197.98,9.28,-1.56,0.02,2.91,1.06,0,">1 nonsynonymous","K87E N130P T140Y P149T",4
"lib2","SARS-CoV-2","TCAAAACAGCTATACT",2,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70A Y91C F160L",3
"lib2","SARS-CoV-2","TCAAAACATCAACTCT",4,0.3,NA,NA,NA,NA,NA,NA,"stop","Y91L V103H Q163*",3
"lib2","SARS-CoV-2","TCAAAACATCGATACA",21,102.09,7.07,-3.77,0.31,1.5,1.14,0.02,">1 nonsynonymous","S19A T85Y S113C",3
"lib2","SARS-CoV-2","TCAAAACATCTTGGAC",1,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T G146L N157L",3
"lib2","SARS-CoV-2","TCAAAACCATACTCAA",9,42.91,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F17T P82M",2
"lib2","SARS-CoV-2","TCAAAACCCATACCCT",4,64.3,6,-4.84,2,3,1.23,0,">1 nonsynonymous","I28A T170Q Q176T",3
"lib2","SARS-CoV-2","TCAAAACCGAGGCAAA",10,79.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1A Q79P",2
"lib2","SARS-CoV-2","TCAAAACCGTTTCAAG",1,3.78,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97E",1
"lib2","SARS-CoV-2","TCAAAACCTTTAATAG",3,94.95,10.66,-0.17,0.05,2.86,1.1,0,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","TCAAAACCTTTAATGT",4,69.98,10.93,0.09,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAACGATTATCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V N13Y V37W V77Y R127P E141G",6
"lib2","SARS-CoV-2","TCAAAACGGATCTATA",14,102.28,6,-4.84,2,3,1.14,0,">1 nonsynonymous","N92P K128D C158A",3
"lib2","SARS-CoV-2","TCAAAACGTAATCGGA",9,212.99,10.85,0.02,0.06,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TCAAAACTAAAGCGCC",3,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94T F126L P133M N157T",4
"lib2","SARS-CoV-2","TCAAAACTAATAAACT",4,60.63,6.29,-4.54,0.43,1.73,1.16,0.01,">1 nonsynonymous","S41V K56L D97V Y175D S200K",5
"lib2","SARS-CoV-2","TCAAAACTCAATGTTC",5,52.65,9.99,-0.85,0.07,2.64,1.04,0,">1 nonsynonymous","N30K D90S F160T",3
"lib2","SARS-CoV-2","TCAAAACTCATACTAT",4,2.84,NA,NA,NA,NA,NA,NA,"stop","R16* F44N E141M",3
"lib2","SARS-CoV-2","TCAAAACTCTTTCCGT",1,11.35,9.62,-1.21,0.23,1.94,1.14,0.03,">1 nonsynonymous","D59V N107G",2
"lib2","SARS-CoV-2","TCAAAACTGGAGTTTG",1,11.42,9.66,-1.17,0.09,2.9,1.02,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","TCAAAACTTAAAACGT",6,43.19,8.2,-2.63,0.17,2.41,1.05,0.01,">1 nonsynonymous","T100L R136W N157Q",3
"lib2","SARS-CoV-2","TCAAAACTTTGAATAC",3,39.98,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T3W G51V Q176A",3
"lib2","SARS-CoV-2","TCAAAACTTTGTTTAT",2,25.04,10.71,-0.12,0.03,3,1.04,0,"1 nonsynonymous","C61M",1
"lib2","SARS-CoV-2","TCAAAACTTTTTCCTA",3,21.75,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N40S K48I P96C R127L",4
"lib2","SARS-CoV-2","TCAAAAGAAACATAAA",2,40.62,10.65,-0.19,0.06,2.85,1.15,0,"1 nonsynonymous","T140K",1
"lib2","SARS-CoV-2","TCAAAAGAAATCGATA",12,38.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L60N Y93P",2
"lib2","SARS-CoV-2","TCAAAAGAACACTACA",1,62.33,6,-4.84,0.55,2.11,1.12,0,">1 nonsynonymous","I2F A89E C150V",3
"lib2","SARS-CoV-2","TCAAAAGAATAGCCAA",1,13.05,9.58,-1.26,0.2,2.29,1,0.02,">1 nonsynonymous","S108N S147I",2
"lib2","SARS-CoV-2","TCAAAAGAGCATTATT",6,89.56,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N107L N120P F167W",3
"lib2","SARS-CoV-2","TCAAAAGATACTACTA",16,12.31,NA,NA,NA,NA,NA,NA,"stop","T3* K94W S129K G155A G174Y S184F",6
"lib2","SARS-CoV-2","TCAAAAGATTCCATTT",6,29.87,6,-4.84,2,3,1.18,0.01,"1 nonsynonymous","G101H",1
"lib2","SARS-CoV-2","TCAAAAGATTTCTGGA",1,0.56,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TCAAAAGCATACCAAT",10,53.96,6,-4.84,2,3,1.19,0,">1 nonsynonymous","D59K K94P G196L",3
"lib2","SARS-CoV-2","TCAAAAGGAAAATATG",7,63.79,11.08,0.24,0.03,2.92,1.09,0,">1 nonsynonymous","Y39I Q168F V173L P197R",4
"lib2","SARS-CoV-2","TCAAAAGGAAAATTGA",4,21.27,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","D34H L131K F167S",3
"lib2","SARS-CoV-2","TCAAAAGGAATTGTAG",1,56.56,10.88,0.04,0.05,2.97,1.05,0,"1 nonsynonymous","A42R",1
"lib2","SARS-CoV-2","TCAAAAGGTAACACGG",1,81.47,9.93,-0.9,0.11,2.23,1,0,"1 nonsynonymous","I28N",1
"lib2","SARS-CoV-2","TCAAAAGTAAAGTAGT",6,27.21,10.68,-0.16,0.05,2.94,1.05,0,">1 nonsynonymous","Y35M I104Y S129H",3
"lib2","SARS-CoV-2","TCAAAAGTATGAACAG",1,31.6,10.77,-0.07,0.07,3,1.04,0,"1 nonsynonymous","K48Q",1
"lib2","SARS-CoV-2","TCAAAAGTCCATTGAC",10,84.52,10.88,0.05,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAAGTGAATCGAG",10,152.59,7.69,-3.14,0.25,1.5,1.07,0.02,">1 nonsynonymous","S45I T55D T100C N107R I142V",5
"lib2","SARS-CoV-2","TCAAAAGTGGACCTGG",2,16.15,10.76,-0.08,0.09,2.97,1.01,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","TCAAAAGTGTTAACGA",3,38.85,8.67,-2.16,0.11,1.75,1.12,0,">1 nonsynonymous","D59K A89V T100H E154N",4
"lib2","SARS-CoV-2","TCAAAATAAAAACAAC",5,32.05,8.64,-2.2,0.13,1.52,1.1,0.01,">1 nonsynonymous","N13P V32G",2
"lib2","SARS-CoV-2","TCAAAATAACAAATCC",2,51.19,8.8,-2.04,0.19,1.5,1.04,0.02,">1 nonsynonymous","V11S D90H",2
"lib2","SARS-CoV-2","TCAAAATAAGTAAAGT",3,20.43,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V32G T55Y G86K Y119Q Q144R G166R",6
"lib2","SARS-CoV-2","TCAAAATAATTTGCAT",5,109.48,9.1,-1.73,0.26,1.5,1,0.02,">1 nonsynonymous","C61R G86P",2
"lib2","SARS-CoV-2","TCAAAATACAACCACT",1,8.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14F Y50V G83N S184V",4
"lib2","SARS-CoV-2","TCAAAATACAGACGTA",10,18.82,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15F L95P Y165F",3
"lib2","SARS-CoV-2","TCAAAATATAATAAAG",5,84.51,10.38,-0.46,0.04,2.85,1.07,0,">1 nonsynonymous","K56V C61W Q163Y",3
"lib2","SARS-CoV-2","TCAAAATATACACGTC",1,21.78,10.73,-0.11,0.08,2.8,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAATATAGCGTTT",2,0,NA,NA,NA,NA,NA,NA,"stop","P7N V103* I138E T170G",4
"lib2","SARS-CoV-2","TCAAAATATATTATAT",10,40.54,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G83N P96N C102M D112N",4
"lib2","SARS-CoV-2","TCAAAATCAAAAACAG",11,155.95,10.4,-0.43,0.04,2.93,1.02,0,">1 nonsynonymous","N1W N58P V115M",3
"lib2","SARS-CoV-2","TCAAAATGAATATAAT",1,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W L57M",2
"lib2","SARS-CoV-2","TCAAAATGTAGAGTGT",1,21.37,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y50V G155R",2
"lib2","SARS-CoV-2","TCAAAATGTATCGGAG",1,140.56,10.62,-0.21,0.03,2.86,1.07,0,">1 nonsynonymous","E10K N110L",2
"lib2","SARS-CoV-2","TCAAAATGTATGCAAC",14,27,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","T15P L95S P133M G152R H189F",5
"lib2","SARS-CoV-2","TCAAAATTCATCCCGG",4,14.19,7.78,-3.06,0.32,1.82,1.05,0.05,">1 nonsynonymous","A18F S113K L122Q S129V",4
"lib2","SARS-CoV-2","TCAAAATTCGTACATA",5,23.06,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R78H D90P P149L",3
"lib2","SARS-CoV-2","TCAAACAAAAAAATCC",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35S E76Y L122S L188H",4
"lib2","SARS-CoV-2","TCAAACAAAATCGCAA",3,92.22,10.2,-0.63,0.04,2.82,1.05,0,">1 nonsynonymous","D90C P149L",2
"lib2","SARS-CoV-2","TCAAACAAACTTACAA",2,0.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P D90L S147N",3
"lib2","SARS-CoV-2","TCAAACAAATTTGCTT",3,1.22,NA,NA,NA,NA,NA,NA,"stop","F44A L60* Y66V K198T",4
"lib2","SARS-CoV-2","TCAAACAACTCAGCAA",3,19.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90A P96W F99I P149L",4
"lib2","SARS-CoV-2","TCAAACAAGACCCCCC",5,183.89,10.61,-0.22,0.02,2.95,1.03,0,"1 nonsynonymous","N4F",1
"lib2","SARS-CoV-2","TCAAACACAAGTATCC",1,9.48,6.43,-4.4,0.57,1.5,1.19,0.02,">1 nonsynonymous","S36Y F62H L125Q Y143A",4
"lib2","SARS-CoV-2","TCAAACACCATTCACG",14,85.29,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K56N F99S Y143K K198R",4
"lib2","SARS-CoV-2","TCAAACACGGAACACC",2,0,NA,NA,NA,NA,NA,NA,"stop","L38Y A67F A89N W106M Y121M K128R G166* K199*",8
"lib2","SARS-CoV-2","TCAAACACTACCATGT",2,31.15,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N1V V20T A67F P82V F134H",5
"lib2","SARS-CoV-2","TCAAACAGAGCTGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","C6F V37W W106S S113R L122*",5
"lib2","SARS-CoV-2","TCAAACAGGCCGAATT",5,43.99,9.91,-0.92,0.14,2.03,1,0.01,">1 nonsynonymous","Y123V E135V",2
"lib2","SARS-CoV-2","TCAAACAGTAAGAAGT",6,1577.56,8.77,-2.06,0.12,1.5,1,0.01,">1 nonsynonymous","I28T A105T",2
"lib2","SARS-CoV-2","TCAAACAGTAAGCATG",8,31.92,6,-4.84,2,3,1.2,0,">1 nonsynonymous","L60F E76I S147Y P149A Y165D",5
"lib2","SARS-CoV-2","TCAAACAGTTAATCAT",2,14.21,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12S P149L P161Q",3
"lib2","SARS-CoV-2","TCAAACATCGACTAGA",1,11.58,6.54,-4.29,0.49,1.5,1.01,0.02,">1 nonsynonymous","Y35N V52S N120F",3
"lib2","SARS-CoV-2","TCAAACATCTAATTAC",1,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F K94T",2
"lib2","SARS-CoV-2","TCAAACATCTATATTA",1,13.96,10.79,-0.05,0.05,2.94,1.07,0,"1 nonsynonymous","S147G",1
"lib2","SARS-CoV-2","TCAAACATGCTGCCAG",4,1.27,NA,NA,NA,NA,NA,NA,"stop","L60Q I80V L95* T201Y",4
"lib2","SARS-CoV-2","TCAAACATTAAACCAA",2,62.89,7.54,-3.3,0.12,1.71,1.11,0,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","TCAAACCAACCCCGCA",5,11.37,7.49,-3.35,0.36,1.5,1,0.07,">1 nonsynonymous","A18P A105R L125F Y165G",4
"lib2","SARS-CoV-2","TCAAACCAAGAACATG",10,96.84,10.85,0.01,0.11,2.69,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAACCACGCATTGT",2,67.26,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","I28S S41L F62D A81P Q176T",5
"lib2","SARS-CoV-2","TCAAACCACGGACCGT",11,77.37,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V20P A81Y I88N T140R",4
"lib2","SARS-CoV-2","TCAAACCAGAAGGCAG",3,44.12,7.93,-2.91,0.35,1.5,1.09,0.04,">1 nonsynonymous","V65Q F99C Y119V C158D",4
"lib2","SARS-CoV-2","TCAAACCAGGCGAGTT",3,14.5,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","C49V T55W I104W D112F",4
"lib2","SARS-CoV-2","TCAAACCCATGACTCG",10,150.24,8.2,-2.63,0.14,1.93,1.07,0.01,">1 nonsynonymous","Y119Q V180A",2
"lib2","SARS-CoV-2","TCAAACCCGATCATCT",6,88.95,10.45,-0.39,0.05,2.92,1.05,0,"1 nonsynonymous","G83W",1
"lib2","SARS-CoV-2","TCAAACCCGTTACAAA",2,60.39,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K56S L60Q W106C N120I P177D L183V",6
"lib2","SARS-CoV-2","TCAAACCCTGATCATA",3,0.57,NA,NA,NA,NA,NA,NA,"stop","L38M K87* Y119K",3
"lib2","SARS-CoV-2","TCAAACCTGAACCGCA",2,11.81,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A42P A67R Y143P",3
"lib2","SARS-CoV-2","TCAAACGAAAGTAAAC",2,4.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82W V103D K128S",3
"lib2","SARS-CoV-2","TCAAACGAAGTAGCCG",4,140.45,9.3,-1.54,0.06,2.85,1.11,0,">1 nonsynonymous","Y143W P149I T201Y",3
"lib2","SARS-CoV-2","TCAAACGACAAAACCA",4,49.89,8.87,-1.97,0.18,2.2,1.13,0.01,">1 nonsynonymous","T15D N130M G146R K199T",4
"lib2","SARS-CoV-2","TCAAACGAGCCTTCTT",10,155.45,10.68,-0.16,0.03,3,1.02,0,">1 nonsynonymous","K128Y E141N",2
"lib2","SARS-CoV-2","TCAAACGAGCTTAAAT",11,86.45,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TCAAACGAGTAAAATA",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6K V11I D90V P133S",4
"lib2","SARS-CoV-2","TCAAACGATTCTACAA",1,2.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H K48G I80M S129M",4
"lib2","SARS-CoV-2","TCAAACGGGCTATACT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10W D97F K128* C158F T201W",5
"lib2","SARS-CoV-2","TCAAACGTACGACAGC",4,0.26,NA,NA,NA,NA,NA,NA,"stop","K114Q Y121V T201*",3
"lib2","SARS-CoV-2","TCAAACGTGGTACAAA",5,74.27,8.71,-2.13,0.08,2.95,1.14,0,">1 nonsynonymous","K87P Y119T",2
"lib2","SARS-CoV-2","TCAAACTAAGCTTTAA",3,57.71,9.46,-1.38,0.06,2.76,1.08,0,">1 nonsynonymous","I138P F156S L188P",3
"lib2","SARS-CoV-2","TCAAACTATACAAATT",14,169.22,6.97,-3.87,0.14,1.84,1.13,0,">1 nonsynonymous","K128L Y143G",2
"lib2","SARS-CoV-2","TCAAACTATAGTCCTC",5,45.74,9.73,-1.11,0.07,2.06,1.1,0,">1 nonsynonymous","E76A V115Y F156W",3
"lib2","SARS-CoV-2","TCAAACTATCGAATCT",2,10.28,10.89,0.06,0.08,3,1.01,0,"1 nonsynonymous","N1P",1
"lib2","SARS-CoV-2","TCAAACTCCCGGATTG",4,14.1,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23V L60H N118H G172H",4
"lib2","SARS-CoV-2","TCAAACTGGTAGGGGC",23,392.31,10.83,0,0.04,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAACTTAACAATCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K94Y E135T G166L",4
"lib2","SARS-CoV-2","TCAAACTTATGATTCA",1,17.99,9.51,-1.33,0.15,1.72,1,0.02,">1 nonsynonymous","C61V Y123F R136P",3
"lib2","SARS-CoV-2","TCAAAGAAAAATTACG",2,21.91,6,-4.84,2,3,1.04,0,">1 nonsynonymous","A81L F99A",2
"lib2","SARS-CoV-2","TCAAAGACAAGATAAG",1,23.82,10.44,-0.4,0.06,2.98,1.04,0,">1 nonsynonymous","N64W G83R S147V",3
"lib2","SARS-CoV-2","TCAAAGAGAATAAGTT",9,86.1,10.49,-0.35,0.06,2.9,1.09,0,"1 nonsynonymous","D59V",1
"lib2","SARS-CoV-2","TCAAAGAGAGCGCTAC",2,0.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N Y50A A67L A105M",4
"lib2","SARS-CoV-2","TCAAAGAGATCCCTGA",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W A14M A89F P133L P161L",5
"lib2","SARS-CoV-2","TCAAAGAGGGGATTAC",1,60.17,10.85,0.01,0.05,2.91,1.09,0,"1 nonsynonymous","A22R",1
"lib2","SARS-CoV-2","TCAAAGAGTGGAATAT",1,7.39,10.38,-0.45,0.24,2.93,1.01,0.01,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","TCAAAGATTAGATACC",5,8.15,6.42,-4.42,0.22,2.56,1.03,0,">1 nonsynonymous","T3C F12D A81G K94T V103R L125K E141V F167Y V180Y S200V",10
"lib2","SARS-CoV-2","TCAAAGATTCAGAATC",6,74.46,6,-4.84,2,3,1.18,0,">1 nonsynonymous","T63E A81T L95P L122E R136V",5
"lib2","SARS-CoV-2","TCAAAGCAAAAATCAT",11,89.69,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G86S G116P R136Y",3
"lib2","SARS-CoV-2","TCAAAGCATAAAACCG",6,119.67,8.2,-2.63,0.22,2.05,1.07,0.02,">1 nonsynonymous","T46I F156L Q176C",3
"lib2","SARS-CoV-2","TCAAAGCCTATCATAG",14,104.97,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F8S P96T D112V",3
"lib2","SARS-CoV-2","TCAAAGCTGTATGACA",1,14.68,10.28,-0.56,0.15,2.29,1,0.01,">1 nonsynonymous","S69W Q84R T201M",3
"lib2","SARS-CoV-2","TCAAAGGACGACGTTG",14,232.37,6,-4.84,0.79,1.5,1.16,0,">1 nonsynonymous","L38G S45N T63C G116R",4
"lib2","SARS-CoV-2","TCAAAGGACTCCTCCA",5,136.8,10.33,-0.51,0.04,2.85,1.07,0,">1 nonsynonymous","N1S G9T Y91L",3
"lib2","SARS-CoV-2","TCAAAGGCACAACTGA",10,111.06,10.09,-0.75,0.06,2.29,1,0,"1 nonsynonymous","E76Y",1
"lib2","SARS-CoV-2","TCAAAGGCGCGAAATG",4,93.8,10.87,0.03,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAGGTGGCGCCTG",1,18.34,10.75,-0.09,0.09,2.77,1.26,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAGTAATGAGCAC",1,9.58,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A89S L95E W106S",3
"lib2","SARS-CoV-2","TCAAAGTACATCCAGA",7,129.68,10.85,0.02,0.05,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TCAAAGTAGCGCATAC",8,135.35,10.86,0.02,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAAGTATCATTGAG",2,17.06,9.46,-1.38,0.09,1.97,1.08,0,">1 nonsynonymous","P7A G83W G152T",3
"lib2","SARS-CoV-2","TCAAAGTCAAAAGTTT",7,11.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33M F160R V181S",3
"lib2","SARS-CoV-2","TCAAAGTCACCGAGAG",3,71.12,10.78,-0.06,0.03,2.88,1.11,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","TCAAAGTTCGAAGACT",2,48.58,10.25,-0.59,0.06,2.68,1.02,0,">1 nonsynonymous","A14H N64R",2
"lib2","SARS-CoV-2","TCAAAGTTTGAGACGG",10,96.01,9.68,-1.15,0.07,2.1,1.02,0,"1 nonsynonymous","V11G",1
"lib2","SARS-CoV-2","TCAAATAAAAATGATT",1,27.91,7.99,-2.85,0.18,2.61,1.04,0,">1 nonsynonymous","N157Q S164I",2
"lib2","SARS-CoV-2","TCAAATAAAATTTAAA",3,16.72,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","I104N",1
"lib2","SARS-CoV-2","TCAAATAAAGAATCAA",10,105.52,9.58,-1.25,0.1,1.66,1.08,0,">1 nonsynonymous","N58M P96I I104F L122H",4
"lib2","SARS-CoV-2","TCAAATAAATGTAAGA",4,41.88,9.76,-1.08,0.12,2.29,1.1,0.01,">1 nonsynonymous","R127S S139R T201H",3
"lib2","SARS-CoV-2","TCAAATAACACTAGCC",3,88.09,10.11,-0.72,0.05,2.38,1.03,0,">1 nonsynonymous","T3M V37K A81E D90S",4
"lib2","SARS-CoV-2","TCAAATAACTTAAGTA",1,47.74,9.98,-0.86,0.07,2.88,1.08,0,">1 nonsynonymous","A42N C61Q K87Q",3
"lib2","SARS-CoV-2","TCAAATAAGAAGCACT",7,40.74,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L5H V11D S139I T170M",4
"lib2","SARS-CoV-2","TCAAATAAGCTGCAGA",3,14.88,6.38,-4.46,2,1.5,1.23,0.04,">1 nonsynonymous","P82F G116I N130I A145V F160T",5
"lib2","SARS-CoV-2","TCAAATAAGGCATAAG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N64F S69* R127P G172K",4
"lib2","SARS-CoV-2","TCAAATAAGTGTTAAT",4,96.11,10.87,0.04,0.05,2.93,1.07,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","TCAAATAATAAACGAT",1,6.49,6.8,-4.04,2,1.5,1.05,0.02,">1 nonsynonymous","A42F V65K P96R",3
"lib2","SARS-CoV-2","TCAAATAATACGGTAG",1,32.87,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N107K N118R N130P N157L V173S",5
"lib2","SARS-CoV-2","TCAAATAATACTTCAT",5,0.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S L60S G74V D97S W106S",5
"lib2","SARS-CoV-2","TCAAATAATATCTTGA",18,205.7,6,-4.84,1.91,1.5,1.18,0.01,">1 nonsynonymous","I2Y A89E N120L K128N Q144S Q176T",6
"lib2","SARS-CoV-2","TCAAATAATGCATAAA",3,12.49,6.56,-4.27,0.59,1.5,1.11,0.06,">1 nonsynonymous","W106I C158W",2
"lib2","SARS-CoV-2","TCAAATACACCCTCTA",7,49.61,6,-4.84,1.65,1.5,1.22,0.03,">1 nonsynonymous","L5I I88R V181W",3
"lib2","SARS-CoV-2","TCAAATACATCAGTCG",3,8.17,6,-4.84,1.53,1.5,1.05,0.02,">1 nonsynonymous","G9K C49V D90A F160N E186C",5
"lib2","SARS-CoV-2","TCAAATACATGCGCCC",1,22.89,8.67,-2.17,0.19,1.99,1.17,0.01,">1 nonsynonymous","V11S D90H",2
"lib2","SARS-CoV-2","TCAAATACCACCTAAC",2,19.81,6,-4.84,2,3,1.04,0,">1 nonsynonymous","C6L D97N F167T",3
"lib2","SARS-CoV-2","TCAAATACCCTCACAC",3,2.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H S45T Q84S R136L",4
"lib2","SARS-CoV-2","TCAAATACCTGGATAT",3,71.89,10.09,-0.74,0.06,2.65,1.05,0,">1 nonsynonymous","A42S N64S G83W D90R",4
"lib2","SARS-CoV-2","TCAAATACGTAATTTA",5,69.34,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6K L60M G86L I138T F160G",5
"lib2","SARS-CoV-2","TCAAATACTTGCAACA",1,6.67,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T3I I80M Y93L V153D",4
"lib2","SARS-CoV-2","TCAAATAGCACGTTAC",9,159.08,10.79,-0.05,0.03,2.95,1.07,0,">1 nonsynonymous","L60M T148F",2
"lib2","SARS-CoV-2","TCAAATATGGCGGTTT",5,58.16,6.09,-4.75,0.74,1.5,1.2,0.01,">1 nonsynonymous","D90S P177F",2
"lib2","SARS-CoV-2","TCAAATATTACACAAC",6,31.87,8.28,-2.56,0.14,2.08,1.05,0.01,">1 nonsynonymous","N1Y S41Y F47L N151K N157S T201I",6
"lib2","SARS-CoV-2","TCAAATCAAAAAAACG",5,32.13,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","Y50C Y93I T100D A105R",4
"lib2","SARS-CoV-2","TCAAATCACTCTATAC",1,18.03,9.91,-0.93,0.11,2.19,1,0,"1 nonsynonymous","G51P",1
"lib2","SARS-CoV-2","TCAAATCATACTCGGG",6,86.41,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39A K48P",2
"lib2","SARS-CoV-2","TCAAATCATATAACGT",1,59.98,9.82,-1.02,0.13,2.19,1.08,0.01,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","TCAAATCATGCGGCTA",5,26.44,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","T46S R179Y",2
"lib2","SARS-CoV-2","TCAAATCCATACGGAC",11,126.07,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","V37H C61Y A105Y G116S P133C G152D",6
"lib2","SARS-CoV-2","TCAAATCCCCGTCCTA",1,11.74,6.01,-4.83,0.9,1.5,1.06,0.01,">1 nonsynonymous","V37G F44I S53Q G117I C158R",5
"lib2","SARS-CoV-2","TCAAATCCGCAACCGC",5,36.33,10.44,-0.4,0.07,2.89,1,0,">1 nonsynonymous","A105S E141L",2
"lib2","SARS-CoV-2","TCAAATCCTAACTTTT",10,223.99,8.59,-2.25,0.07,2.98,1.04,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","TCAAATCCTTATTTTA",3,8.23,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","N40Y C49R D90V Y159G",4
"lib2","SARS-CoV-2","TCAAATCGCGCTTAGC",3,27.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S G86L",2
"lib2","SARS-CoV-2","TCAAATCTATTTTTCC",3,1.16,NA,NA,NA,NA,NA,NA,"stop","A14E N24E C61F S69* F126L F167L",6
"lib2","SARS-CoV-2","TCAAATCTTCACGCTA",3,9.05,7.79,-3.04,0.3,1.77,1.14,0.01,">1 nonsynonymous","A42T K87S F185R",3
"lib2","SARS-CoV-2","TCAAATGAGCGGGAGT",10,46.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88D R124S",2
"lib2","SARS-CoV-2","TCAAATGAGGGGTAAC",3,111.72,9.94,-0.89,0.05,2.29,1.05,0,">1 nonsynonymous","C49V T55S T201K",3
"lib2","SARS-CoV-2","TCAAATGGCTATACTT",6,74.02,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25Q S69T T85L I104S Q144S P169S",6
"lib2","SARS-CoV-2","TCAAATGGTGCAGGAG",6,89.22,10.21,-0.63,0.03,2.91,1.04,0,"1 nonsynonymous","C31T",1
"lib2","SARS-CoV-2","TCAAATGTTTTTATAT",5,3.77,NA,NA,NA,NA,NA,NA,"stop","K94M F156* F167I",3
"lib2","SARS-CoV-2","TCAAATTAAGCCCCAA",3,90.31,10.93,0.09,0.06,2.8,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAATTAAGTGCCCA",5,59.48,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S36P P96S L122V Y143H G155N",5
"lib2","SARS-CoV-2","TCAAATTATTGAAAAA",9,126.19,10.74,-0.1,0.03,2.94,1.08,0,">1 nonsynonymous","I2C D97E A192R",3
"lib2","SARS-CoV-2","TCAAATTCACGGCATA",1,5.5,10.36,-0.48,0.14,3,1.07,0.01,">1 nonsynonymous","V37L T55L S129Y",3
"lib2","SARS-CoV-2","TCAAATTCATCTGTAA",4,47.79,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S69K V77A S113V K128L T201N",5
"lib2","SARS-CoV-2","TCAAATTCCCACTTGC",6,41.06,9.91,-0.93,0.06,2.94,1.06,0,"1 nonsynonymous","I142C",1
"lib2","SARS-CoV-2","TCAAATTCTGTTTTAC",2,10.08,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y21G G117Y",2
"lib2","SARS-CoV-2","TCAAATTGAAAAAAAC",3,35.16,10.14,-0.7,0.09,2.73,1.06,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","TCAAATTGAACAGGAG",10,206.08,10.53,-0.3,0.02,2.97,1.03,0,">1 nonsynonymous","P7S L60W",2
"lib2","SARS-CoV-2","TCAAATTGCGTAAACT",17,118.81,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F17V G86S G172E",3
"lib2","SARS-CoV-2","TCAAATTGTGATCCAC",1,30.12,10.78,-0.06,0.07,2.84,1.21,0,">1 nonsynonymous","N151K A190E",2
"lib2","SARS-CoV-2","TCAAATTTAACATAGC",11,70.9,7.06,-3.78,0.34,1.5,1.13,0.03,">1 nonsynonymous","Q84L W106S K132V",3
"lib2","SARS-CoV-2","TCAAATTTATACGCCA",5,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87L A105P",2
"lib2","SARS-CoV-2","TCAAATTTATCCTAGG",7,63.86,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5W V20M Y39G Q168V",4
"lib2","SARS-CoV-2","TCAAATTTGAAGTTGT",2,34.55,10.91,0.08,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAATTTGCGTAAAA",2,45.5,6.76,-4.07,0.24,1.5,1.09,0.01,">1 nonsynonymous","G51T Y143C",2
"lib2","SARS-CoV-2","TCAAATTTGGTTAAAT",2,73.58,8.91,-1.93,0.1,2.56,1.1,0,">1 nonsynonymous","A42Y Q176S",2
"lib2","SARS-CoV-2","TCAAATTTTGCCAAAC",2,5.78,NA,NA,NA,NA,NA,NA,"stop","V11R T63D L122* P149L",4
"lib2","SARS-CoV-2","TCAAATTTTTGGGTGG",7,30.83,6.6,-4.23,0.49,1.5,1.1,0.03,">1 nonsynonymous","A14P L122T A145P",3
"lib2","SARS-CoV-2","TCAACAAAAAATTCTA",6,2.44,NA,NA,NA,NA,NA,NA,"stop","P149* F156* P169T Q176K",4
"lib2","SARS-CoV-2","TCAACAAAAAGTTGCG",8,63.9,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","I2S V37E S53Y D90S N107H",5
"lib2","SARS-CoV-2","TCAACAAAAGACCAGG",8,24.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3L L95Y Y143S",3
"lib2","SARS-CoV-2","TCAACAAACCCTAAAT",1,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85L A145V F167L",3
"lib2","SARS-CoV-2","TCAACAAAGATCCCAG",12,156.75,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N40I C49H S113D N120C",4
"lib2","SARS-CoV-2","TCAACAAATTCCCAAA",2,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22T G86V V103K S139T T170V",5
"lib2","SARS-CoV-2","TCAACAAGATACTACA",8,41.16,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S19F F99K G146R",3
"lib2","SARS-CoV-2","TCAACAAGCAACTGTA",6,102.26,10.26,-0.58,0.06,2.82,1.14,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","TCAACAAGCACTTGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66S K128L P149F T170* C195F",5
"lib2","SARS-CoV-2","TCAACAAGCGGAGACT",4,62.55,10.3,-0.54,0.04,2.96,1.02,0,">1 nonsynonymous","D59M Y121L",2
"lib2","SARS-CoV-2","TCAACAAGTAGAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I P149C K198Y",3
"lib2","SARS-CoV-2","TCAACAATCATCCAAG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","T15R I88L S139*",3
"lib2","SARS-CoV-2","TCAACAATCTGCGTAC",9,229.96,10.83,-0.01,0.04,2.93,1.09,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TCAACAATGTAGGTCC",2,77.1,8.13,-2.7,0.13,1.75,1.12,0.01,">1 nonsynonymous","I2S L38W F44N C61L D75E K132E F160R",7
"lib2","SARS-CoV-2","TCAACACAATAGGAAT",2,48.7,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V11D I28K D34S F99Y Y121I E154Y P169F",7
"lib2","SARS-CoV-2","TCAACACACATATTTG",4,35.35,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","V11R Y21T G86C K198I",4
"lib2","SARS-CoV-2","TCAACACACGATACGG",7,50.83,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D68V D90L P96Y D98Y",4
"lib2","SARS-CoV-2","TCAACACAGCGTTAGC",8,116.59,10.69,-0.14,0.03,2.96,1.04,0,">1 nonsynonymous","N4K Y39I D90N L111F",4
"lib2","SARS-CoV-2","TCAACACCAAAACCAT",9,40.16,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N13I S53I G83V Y121E S129T P149H",6
"lib2","SARS-CoV-2","TCAACACCCAACGAAT",7,3.27,NA,NA,NA,NA,NA,NA,"stop","G9F V37M N40* P96S",4
"lib2","SARS-CoV-2","TCAACACCCTGTATAC",12,92.62,9.04,-1.79,0.09,1.8,1.12,0,">1 nonsynonymous","C6V F12R P197L",3
"lib2","SARS-CoV-2","TCAACACGAAATATTA",9,248.07,10.28,-0.55,0.03,2.99,1.03,0,">1 nonsynonymous","A18S F156V Q168A",3
"lib2","SARS-CoV-2","TCAACACGGATTCACG",12,182.67,8.32,-2.51,0.12,2.7,1.05,0.01,">1 nonsynonymous","L122Y S129T G146P",3
"lib2","SARS-CoV-2","TCAACACTCATTTTTA",2,17.79,6.66,-4.18,0.51,1.5,1.14,0.04,">1 nonsynonymous","K26A T63D R78Y I142L F167W",5
"lib2","SARS-CoV-2","TCAACACTTGGTCTCC",6,55.55,10.79,-0.05,0.03,2.94,1.08,0,">1 nonsynonymous","F8L G83F",2
"lib2","SARS-CoV-2","TCAACAGAAACTGTAA",2,16.89,10.36,-0.48,0.08,2.93,1.09,0.01,"1 nonsynonymous","V181I",1
"lib2","SARS-CoV-2","TCAACAGAACATGTGG",10,0.99,NA,NA,NA,NA,NA,NA,"stop","A33E Q84*",2
"lib2","SARS-CoV-2","TCAACAGAGCTACTCA",6,99.48,9.33,-1.5,0.1,1.85,1.1,0,">1 nonsynonymous","K26R R136P",2
"lib2","SARS-CoV-2","TCAACAGCTCAATATA",5,1.35,NA,NA,NA,NA,NA,NA,"stop","K87R W106G K114* L122T",4
"lib2","SARS-CoV-2","TCAACAGCTCGCTCCA",5,123.78,10.76,-0.08,0.06,2.89,1.12,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","TCAACAGTCTCCTGCT",1,12.38,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G86V S184D",2
"lib2","SARS-CoV-2","TCAACAGTGAAACCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","N30* C61V I80T S129I",4
"lib2","SARS-CoV-2","TCAACAGTTCCCCAAA",3,34.44,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","T3W V77F Y123A I138L",4
"lib2","SARS-CoV-2","TCAACATACTAAGTAG",3,42.55,9.99,-0.85,0.06,2.08,1,0,"1 nonsynonymous","I88T",1
"lib2","SARS-CoV-2","TCAACATACTGAAGCG",3,19.77,8.11,-2.73,0.22,1.82,1.01,0.02,">1 nonsynonymous","N107G F126Q",2
"lib2","SARS-CoV-2","TCAACATAGTTTTCCC",2,38.21,10.83,-0.01,0.06,2.89,1.14,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","TCAACATATTTAGAAG",2,10.98,10.63,-0.2,0.11,3,1,0,">1 nonsynonymous","N110E N130G",2
"lib2","SARS-CoV-2","TCAACATCGATAGTCT",4,6.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","C102Q K114V K132M",3
"lib2","SARS-CoV-2","TCAACATGCAGTATAG",16,0.72,NA,NA,NA,NA,NA,NA,"stop","N58Q F70L T85* P96S",4
"lib2","SARS-CoV-2","TCAACATGGCACCAAT",1,1.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Q K114G",2
"lib2","SARS-CoV-2","TCAACATTAAAAAGTA",1,30.38,9.17,-1.66,0.08,3,1.07,0,">1 nonsynonymous","A33H Y119H",2
"lib2","SARS-CoV-2","TCAACATTCATACGTA",2,4.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97H N118P F134H E141M N157C Q168W",6
"lib2","SARS-CoV-2","TCAACATTCATCACCT",2,37.13,10.71,-0.12,0.06,3,1,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","TCAACCAAATTCAGGA",2,2.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21W F99E",2
"lib2","SARS-CoV-2","TCAACCAAGAAATAGT",4,76.69,9.23,-1.61,0.05,2.91,1.08,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TCAACCACCCCGGTCA",1,56.69,8.63,-2.21,0.08,2.49,1,0,">1 nonsynonymous","T85M Q176S",2
"lib2","SARS-CoV-2","TCAACCACCTATTACT",2,53.23,8.96,-1.87,0.12,2.27,1.12,0.01,">1 nonsynonymous","L111T Q144V",2
"lib2","SARS-CoV-2","TCAACCATAAATATAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15* T85E F99T F126T P161T",5
"lib2","SARS-CoV-2","TCAACCATCCTGTATA",2,1.45,NA,NA,NA,NA,NA,NA,"stop","P7R N13V Y35L S41* T148P",5
"lib2","SARS-CoV-2","TCAACCATTCAGATTC",2,33.79,10.99,0.15,0.08,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACCCAAAAACTGA",5,78.79,6,-4.84,2,3,1.12,0,">1 nonsynonymous","K94N N110S G172T",3
"lib2","SARS-CoV-2","TCAACCCCTATAAACA",1,15.58,11.07,0.23,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACCCTCGGAGCCA",5,40.38,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S19W R25I Y50I N64Y D68N G86D",6
"lib2","SARS-CoV-2","TCAACCGAAAGCCTCC",7,5.25,NA,NA,NA,NA,NA,NA,"stop","P82* N110Y L122Q T170R K199N",5
"lib2","SARS-CoV-2","TCAACCGAATAAAAAG",6,50.93,6,-4.84,1.23,3,1.15,0,">1 nonsynonymous","V11K C49L",2
"lib2","SARS-CoV-2","TCAACCGACTAAGCGA",3,18.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25S S41D Y50G N92L L111Y Y123T G172H",7
"lib2","SARS-CoV-2","TCAACCGCTATAACAA",5,40.67,9.36,-1.47,0.11,1.91,1.07,0.01,">1 nonsynonymous","G9P F99L",2
"lib2","SARS-CoV-2","TCAACCGGATCCTTTA",5,100.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82G V115E N157A",3
"lib2","SARS-CoV-2","TCAACCGTTCTTTCTT",4,61.09,10.78,-0.05,0.05,2.92,1.07,0,">1 nonsynonymous","T140A K199E",2
"lib2","SARS-CoV-2","TCAACCTAATGCATAT",3,16.18,9.43,-1.4,0.08,2.88,1.14,0.01,">1 nonsynonymous","T140V N157D",2
"lib2","SARS-CoV-2","TCAACCTAGGAAATAT",5,41.72,10.65,-0.18,0.05,2.87,1.12,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TCAACCTATAATTACA",1,13.91,6,-4.84,2,1.5,1.09,0.06,">1 nonsynonymous","D34Q I88W F185I",3
"lib2","SARS-CoV-2","TCAACCTTCGACCTGC",6,55.84,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12C G117L S147V L162Q",4
"lib2","SARS-CoV-2","TCAACCTTGATTTTAG",9,28.53,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","I28P V103D",2
"lib2","SARS-CoV-2","TCAACGAAAAGTACCA",7,37.04,9.28,-1.56,0.12,1.69,1.01,0.01,">1 nonsynonymous","E10G F99L",2
"lib2","SARS-CoV-2","TCAACGAACACACCAT",6,35.36,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A14I D68G G116Q Y143R G152S",5
"lib2","SARS-CoV-2","TCAACGAACCTAATAT",2,0,NA,NA,NA,NA,NA,NA,"stop","L5* T46L N118V",3
"lib2","SARS-CoV-2","TCAACGAACTCTTGCC",15,30.95,6.18,-4.66,0.97,1.5,1.31,0.03,">1 nonsynonymous","N13A N92A N109V",3
"lib2","SARS-CoV-2","TCAACGAAGAAACCAG",9,122.46,10.68,-0.16,0.04,2.86,1.09,0,">1 nonsynonymous","V37P N130E",2
"lib2","SARS-CoV-2","TCAACGAATCTAACTG",7,30.07,10.9,0.06,0.1,2.74,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACGACACGTTAAT",2,40.52,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T85F C150N F160R P191V",4
"lib2","SARS-CoV-2","TCAACGATAATAACGA",11,172.39,10.86,0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACGATAGATGAGG",3,33.13,8.11,-2.73,0.26,1.5,1.06,0.03,">1 nonsynonymous","N58I P96R E154L",3
"lib2","SARS-CoV-2","TCAACGATGACAGTCC",5,18.94,7.16,-3.68,0.6,1.5,1.26,0.07,">1 nonsynonymous","S19K C61S P96K G101E",4
"lib2","SARS-CoV-2","TCAACGATTAAAGGTA",3,57.35,10.69,-0.15,0.06,2.73,1.11,0,">1 nonsynonymous","L5R S41D T85V D90R",4
"lib2","SARS-CoV-2","TCAACGATTAATCTAT",7,52.28,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","T3P E10A S45R P96S F99L Y119P",6
"lib2","SARS-CoV-2","TCAACGCAAACCAACA",5,97.76,8.83,-2,0.11,1.59,1.06,0,">1 nonsynonymous","N58M N107V K132L",3
"lib2","SARS-CoV-2","TCAACGCACGAGAGCC",9,1.24,NA,NA,NA,NA,NA,NA,"stop","S41D K132* C158M G174V",4
"lib2","SARS-CoV-2","TCAACGCAGAATCACG",10,3.49,NA,NA,NA,NA,NA,NA,"stop","K87* T100N F134E",3
"lib2","SARS-CoV-2","TCAACGCAGCCATAAA",18,249.66,10.75,-0.09,0.05,2.92,1.09,0,">1 nonsynonymous","E10D P149R Q163G",3
"lib2","SARS-CoV-2","TCAACGGATATTGAAG",1,6.95,10.73,-0.11,0.18,2.69,1.38,0.01,">1 nonsynonymous","K56L S139N",2
"lib2","SARS-CoV-2","TCAACGGCACTAGTTG",1,5.69,11.14,0.3,0.16,2.96,1.04,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCAACGGGACAATGAC",2,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F I138P",2
"lib2","SARS-CoV-2","TCAACGGTATTTTAAT",2,8.85,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9C I80K G116N L125N",4
"lib2","SARS-CoV-2","TCAACGGTTAACACGA",9,60.18,9.82,-1.02,0.15,1.75,1.12,0.01,"1 nonsynonymous","D68V",1
"lib2","SARS-CoV-2","TCAACGGTTGATTGTG",9,89.29,8.17,-2.66,0.17,1.84,1.06,0.01,"1 nonsynonymous","Y165E",1
"lib2","SARS-CoV-2","TCAACGTAGTAAGACT",5,72.75,10.86,0.02,0.02,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACGTGACAATAGT",3,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Q A22G S43K G117A P149S",5
"lib2","SARS-CoV-2","TCAACGTTACTTTAAC",3,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22V K87S W106Y",3
"lib2","SARS-CoV-2","TCAACGTTTTGTTAAC",9,76.24,6.09,-4.74,0.99,1.5,1.24,0.02,">1 nonsynonymous","A18G Y93M",2
"lib2","SARS-CoV-2","TCAACTAAAGAAAGGA",4,1.03,NA,NA,NA,NA,NA,NA,"stop","C6* F47S N92H C102*",4
"lib2","SARS-CoV-2","TCAACTAACGGAGCTG",1,28.8,9.29,-1.54,0.1,2.97,1.1,0,"1 nonsynonymous","G117S",1
"lib2","SARS-CoV-2","TCAACTACAAGCTCGT",2,56.68,10.61,-0.23,0.05,2.9,1.11,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","TCAACTACTAATCTGG",2,28.16,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","W23R S29T D97S N107S Y119S",5
"lib2","SARS-CoV-2","TCAACTAGAACCCCGA",10,200.04,8.4,-2.44,0.11,2.52,1.07,0,">1 nonsynonymous","T46V S113R T201L",3
"lib2","SARS-CoV-2","TCAACTAGAATGAGGA",1,15.18,10.24,-0.59,0.16,2.83,1.08,0.01,"1 nonsynonymous","T15F",1
"lib2","SARS-CoV-2","TCAACTAGTCCAATAA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K A33E Q84Y S113M C158G K199R",6
"lib2","SARS-CoV-2","TCAACTATGCGATAAG",4,25.43,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D68G Y91K S139N V180Y",4
"lib2","SARS-CoV-2","TCAACTCAAATTTTGA",2,76.59,10.76,-0.08,0.06,2.83,1.16,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","TCAACTCAATGCCAAT",4,62.32,8.27,-2.57,0.11,2.02,1.05,0,"1 nonsynonymous","G74T",1
"lib2","SARS-CoV-2","TCAACTCCACGCAAAT",3,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V F44H P96E N151Y",4
"lib2","SARS-CoV-2","TCAACTCGTACTATCG",3,54.86,10.8,-0.04,0.06,2.91,1.1,0,"1 nonsynonymous","S108A",1
"lib2","SARS-CoV-2","TCAACTCTAACCCTGG",7,95.04,10.85,0.02,0.07,2.88,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACTCTATGGCGGC",6,47.37,10.77,-0.07,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACTCTCTCACTCC",6,178.71,7.46,-3.38,0.17,1.57,1.19,0.01,">1 nonsynonymous","Y175I T201L",2
"lib2","SARS-CoV-2","TCAACTGGGACTCTGA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","F99Y F156*",2
"lib2","SARS-CoV-2","TCAACTGGTCGCTGTC",5,15.89,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61T T100Q I104K",3
"lib2","SARS-CoV-2","TCAACTGTATCAACTT",3,78.17,10.73,-0.1,0.06,2.9,1.11,0,"1 nonsynonymous","A33C",1
"lib2","SARS-CoV-2","TCAACTGTGCTACCGG",1,67.77,10.85,0.02,0.05,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAACTTCTTCAGAGC",30,360.85,10.71,-0.13,0.02,2.95,1.06,0,"1 nonsynonymous","T140I",1
"lib2","SARS-CoV-2","TCAACTTGAAAACCAC",5,60.78,10.85,0.01,0.05,2.95,1.06,0,">1 nonsynonymous","S36E T100V",2
"lib2","SARS-CoV-2","TCAACTTTCAGCGAGG",1,42.7,10.06,-0.77,0.05,2.9,1.02,0,"1 nonsynonymous","L57K",1
"lib2","SARS-CoV-2","TCAAGAAAAAAGTAAA",4,39.97,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F99Y N107Y",2
"lib2","SARS-CoV-2","TCAAGAAAGAGACTGA",7,138.31,10.23,-0.61,0.08,2.52,1.02,0,">1 nonsynonymous","Y123L G174Y",2
"lib2","SARS-CoV-2","TCAAGAAATACGTAAT",15,113.77,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G83D N107A Y119M P149Y",4
"lib2","SARS-CoV-2","TCAAGAAATAGAGATT",4,32.69,8.63,-2.2,0.19,1.5,1.07,0.02,">1 nonsynonymous","L95P Y123F",2
"lib2","SARS-CoV-2","TCAAGAAATGGACTCA",12,5.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M T85M K132A",3
"lib2","SARS-CoV-2","TCAAGAACAAAATAAG",14,132.27,10.5,-0.33,0.04,2.97,1.03,0,"1 nonsynonymous","N120C",1
"lib2","SARS-CoV-2","TCAAGAACAAGTCGCC",20,255.91,9.54,-1.3,0.07,2.41,1.08,0,">1 nonsynonymous","N30Q C61E Y91C",3
"lib2","SARS-CoV-2","TCAAGAACTCTACATA",2,37.37,10.87,0.03,0.06,2.95,1.05,0,"1 nonsynonymous","G152Q",1
"lib2","SARS-CoV-2","TCAAGAACTCTCGCAA",5,74.77,6.3,-4.54,0.78,1.5,1.26,0.04,">1 nonsynonymous","F8V R25N",2
"lib2","SARS-CoV-2","TCAAGAAGAACCACTC",16,238.46,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","R124Q",1
"lib2","SARS-CoV-2","TCAAGAAGACGAATTT",3,20.04,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K26W K87E I104T E154I",4
"lib2","SARS-CoV-2","TCAAGAAGACGTCCAA",11,55.67,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S41L L60M G83L Y93K S113T L122M K198T",7
"lib2","SARS-CoV-2","TCAAGAAGAGAATTAA",2,30.49,6,-4.84,2,1.5,1.36,0.07,">1 nonsynonymous","N4L Y50L Y165D",3
"lib2","SARS-CoV-2","TCAAGAAGCTTATGCC",4,167.27,10.77,-0.07,0.06,2.9,1.1,0,"1 nonsynonymous","N30D",1
"lib2","SARS-CoV-2","TCAAGAATAAAGGACC",2,257.35,9.18,-1.65,0.35,1.5,1,0.06,">1 nonsynonymous","T3A G9F L57V A89S D98N I142S G166I",7
"lib2","SARS-CoV-2","TCAAGAATTAATCGTG",6,48.49,8.82,-2.01,0.11,2.97,1.11,0,">1 nonsynonymous","F126K S184G",2
"lib2","SARS-CoV-2","TCAAGAATTTTAAATG",3,49.21,9.78,-1.06,0.09,2.03,1.11,0,">1 nonsynonymous","F44K P133W",2
"lib2","SARS-CoV-2","TCAAGACAACCACAAC",3,45.94,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D90F G172Y",2
"lib2","SARS-CoV-2","TCAAGACAATACTACC",3,49.21,10.62,-0.21,0.05,3,1,0,">1 nonsynonymous","L60H N120L",2
"lib2","SARS-CoV-2","TCAAGACACGAATAAA",6,51.26,10.74,-0.09,0.05,2.88,1.12,0,">1 nonsynonymous","C61Q L122F K128S",3
"lib2","SARS-CoV-2","TCAAGACAGCCTTAAT",3,21.2,8.61,-2.23,0.13,3,1,0.01,"1 nonsynonymous","T170I",1
"lib2","SARS-CoV-2","TCAAGACATTTACTAT",5,111.2,7.22,-3.61,0.15,2.15,1.12,0.01,">1 nonsynonymous","E135A Y175D",2
"lib2","SARS-CoV-2","TCAAGACCCATTAAGC",4,44.24,7.66,-3.17,0.26,1.5,1.17,0.02,">1 nonsynonymous","G9L R16S N151L Y178R",4
"lib2","SARS-CoV-2","TCAAGACCTCGGGCGT",13,1.24,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","TCAAGACCTTTGTAAA",2,13.84,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T3V T85F Y93K A105W",4
"lib2","SARS-CoV-2","TCAAGACTAAAAGAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N120R G174*",2
"lib2","SARS-CoV-2","TCAAGAGACTGCTCTA",4,140.41,10.2,-0.63,0.03,2.95,1.02,0,">1 nonsynonymous","C6V T201E",2
"lib2","SARS-CoV-2","TCAAGAGATATTACTT",4,45.74,10.43,-0.41,0.07,2.93,1.05,0,"1 nonsynonymous","G166N",1
"lib2","SARS-CoV-2","TCAAGAGATCACGGCT",6,33.9,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48Y L60S G74C A89M E141Y",5
"lib2","SARS-CoV-2","TCAAGAGGTTGCTAAA",3,14.33,6.07,-4.76,0.67,3,1.14,0.01,">1 nonsynonymous","F17S D75S F99S T148A G172N",5
"lib2","SARS-CoV-2","TCAAGAGTACAGAAAG",1,10.89,9.96,-0.88,0.1,2.63,1,0,">1 nonsynonymous","Q79L F99W",2
"lib2","SARS-CoV-2","TCAAGAGTAGAAAACT",4,0.74,NA,NA,NA,NA,NA,NA,"stop","A33* D90L",2
"lib2","SARS-CoV-2","TCAAGAGTATAATCTT",5,71.61,10.75,-0.09,0.04,2.94,1.06,0,">1 nonsynonymous","I2H T100N",2
"lib2","SARS-CoV-2","TCAAGATATAAGTTTT",6,2.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G N58I D75H I104T",4
"lib2","SARS-CoV-2","TCAAGATATACGACTT",9,113.43,10.58,-0.26,0.04,2.93,1.04,0,"1 nonsynonymous","S129L",1
"lib2","SARS-CoV-2","TCAAGATCAACGTCAA",7,22.23,9.7,-1.13,0.17,2.2,1,0.01,">1 nonsynonymous","T15F E154L",2
"lib2","SARS-CoV-2","TCAAGATCGACACAAC",1,40.38,10.91,0.08,0.06,2.85,1.17,0,"1 nonsynonymous","E154Q",1
"lib2","SARS-CoV-2","TCAAGATCGCCTCGGA",1,17.01,10.71,-0.13,0.07,2.87,1.1,0,">1 nonsynonymous","E10P V115I",2
"lib2","SARS-CoV-2","TCAAGATGATTAACAG",13,1.62,NA,NA,NA,NA,NA,NA,"stop","Y39R S113*",2
"lib2","SARS-CoV-2","TCAAGATGGACAAATC",1,0,NA,NA,NA,NA,NA,NA,"stop","G51T K114D R179*",3
"lib2","SARS-CoV-2","TCAAGATTAGCAAAAT",5,49.9,8.1,-2.73,0.18,1.96,1.08,0.01,">1 nonsynonymous","S45L C61Y V115T G174T",4
"lib2","SARS-CoV-2","TCAAGATTTCAAAAAA",9,70.42,8.26,-2.58,0.29,1.5,1,0.03,">1 nonsynonymous","L5A L111N Y165R T201K",4
"lib2","SARS-CoV-2","TCAAGCAAAGACTGGC",10,2.72,NA,NA,NA,NA,NA,NA,"stop","K48* P54R I80R",3
"lib2","SARS-CoV-2","TCAAGCACAGATGCGA",6,118.97,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A33W G117S R124C",3
"lib2","SARS-CoV-2","TCAAGCAGGCCGCGAG",1,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57M D98L G117P",3
"lib2","SARS-CoV-2","TCAAGCATAGGGTACT",1,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L G146I S184L",3
"lib2","SARS-CoV-2","TCAAGCATTAAATTAG",6,0.7,NA,NA,NA,NA,NA,NA,"stop","V11R V37L V103* H189N",4
"lib2","SARS-CoV-2","TCAAGCCAAGAGCAAT",7,71.45,10.79,-0.05,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAGCCCAAGATTGT",3,0,NA,NA,NA,NA,NA,NA,"stop","S19P K94* S113L D137G",4
"lib2","SARS-CoV-2","TCAAGCTAATACACCC",2,10.31,6,-4.84,2,2.89,1.26,0.02,">1 nonsynonymous","V37A D97S N157R T170M",4
"lib2","SARS-CoV-2","TCAAGCTCAAAAAAGC",6,3.81,NA,NA,NA,NA,NA,NA,"stop","K87* E141T N157L",3
"lib2","SARS-CoV-2","TCAAGCTCACAACTCA",2,17.78,8.17,-2.67,0.33,1.5,1,0.05,">1 nonsynonymous","Y50H D98I N109R",3
"lib2","SARS-CoV-2","TCAAGCTGATAGAAAT",17,247.1,10.27,-0.57,0.03,2.87,1.02,0,">1 nonsynonymous","A14D S129G A192E",3
"lib2","SARS-CoV-2","TCAAGCTTAGAAAGCA",2,0.27,NA,NA,NA,NA,NA,NA,"stop","W23R A81*",2
"lib2","SARS-CoV-2","TCAAGCTTGACATTAA",8,56.48,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","L60Q K87S P96N V103N Y175G",5
"lib2","SARS-CoV-2","TCAAGCTTTGTTGCCA",24,1486.65,10.22,-0.62,0.02,2.92,1.02,0,">1 nonsynonymous","T3P S43I P169L",3
"lib2","SARS-CoV-2","TCAAGGAACAAGATCT",2,28.85,8.25,-2.59,0.2,1.5,1.03,0.02,">1 nonsynonymous","N4S K48V S129V G152S V181M",5
"lib2","SARS-CoV-2","TCAAGGAACAGCCGTG",3,28.5,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V52S L95R N109Y E154W",4
"lib2","SARS-CoV-2","TCAAGGAACGAACGAA",7,197.24,8.5,-2.34,0.23,1.5,1.01,0.03,">1 nonsynonymous","N1Y T46S A105Q K114W",4
"lib2","SARS-CoV-2","TCAAGGAAGGAATTAC",2,30.62,10.17,-0.66,0.02,2.94,1.07,0,">1 nonsynonymous","N58A K87I D98L",3
"lib2","SARS-CoV-2","TCAAGGACTTACCAAA",3,88.58,10.7,-0.14,0.06,2.96,1.06,0,">1 nonsynonymous","C61W F160Y",2
"lib2","SARS-CoV-2","TCAAGGAGAAGATGTA",2,68.24,10.43,-0.41,0.03,2.99,1.02,0,">1 nonsynonymous","F44L G83R",2
"lib2","SARS-CoV-2","TCAAGGAGCATCAAAC",4,37.25,9.05,-1.79,0.12,1.86,1.1,0.01,">1 nonsynonymous","Y35H E154W",2
"lib2","SARS-CoV-2","TCAAGGAGTCGTCCCG",1,10.06,8.12,-2.72,0.24,2.03,1.05,0.02,">1 nonsynonymous","R27L Y165R",2
"lib2","SARS-CoV-2","TCAAGGAGTTTGGCAA",3,44.48,10.75,-0.08,0.06,2.86,1.14,0,"1 nonsynonymous","N40H",1
"lib2","SARS-CoV-2","TCAAGGCAATTTATGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87M I138R N157E",3
"lib2","SARS-CoV-2","TCAAGGCACGGAACTG",2,18.41,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","D68W F99N E154I",3
"lib2","SARS-CoV-2","TCAAGGCACTAACTAC",3,75.63,10.7,-0.13,0.05,2.95,1.04,0,"1 nonsynonymous","K94A",1
"lib2","SARS-CoV-2","TCAAGGCCAATAAATA",8,39.61,8.36,-2.48,0.37,1.5,1,0.06,">1 nonsynonymous","N1K A33T S108Q T170H",4
"lib2","SARS-CoV-2","TCAAGGCCATTACTCT",3,36.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50E L60E",2
"lib2","SARS-CoV-2","TCAAGGCCCGAGCCCG",5,21.63,8.96,-1.88,0.3,1.5,1,0.04,">1 nonsynonymous","P7L Y35F T100G E141W",4
"lib2","SARS-CoV-2","TCAAGGCGAAGCATAT",9,78.78,9.35,-1.49,0.1,1.74,1.14,0,"1 nonsynonymous","N92G",1
"lib2","SARS-CoV-2","TCAAGGCGATAAAAGA",7,117.83,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R25Y D137G",2
"lib2","SARS-CoV-2","TCAAGGCGCAAACCAA",7,58.36,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E10L S69N T85S G166W",4
"lib2","SARS-CoV-2","TCAAGGCTTAGGATTA",4,15.6,10.78,-0.05,0.09,3,1.01,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","TCAAGGGAAGCGGTTA",1,22.95,8.48,-2.36,0.13,2.7,1.04,0.01,">1 nonsynonymous","C6V R78P Y119A N151K",4
"lib2","SARS-CoV-2","TCAAGGTAATTCCACA",5,60.35,7.34,-3.5,0.27,1.5,1.17,0.02,">1 nonsynonymous","S45K V173T",2
"lib2","SARS-CoV-2","TCAAGGTATTCCCCCG",2,54.07,10.43,-0.4,0.06,2.91,1.06,0,">1 nonsynonymous","T63S T140L P169R A190S",4
"lib2","SARS-CoV-2","TCAAGGTCCCCTTCAA",2,12.44,9.16,-1.68,0.13,2.9,1.12,0.01,">1 nonsynonymous","G174V S184Y",2
"lib2","SARS-CoV-2","TCAAGGTCTCACTCAT",1,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61Y A81N S139I",3
"lib2","SARS-CoV-2","TCAAGGTTCGTTTACA",4,88.47,10.88,0.05,0.04,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TCAAGGTTTACCTTGG",1,63.46,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14H Y35L L95S G146W C150P Y178K",6
"lib2","SARS-CoV-2","TCAAGTAACACCAAGG",1,8.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31L Y93S I138Y",3
"lib2","SARS-CoV-2","TCAAGTAACCGGAGGC",5,0.94,NA,NA,NA,NA,NA,NA,"stop","A33* G101Y P177F",3
"lib2","SARS-CoV-2","TCAAGTACCACCAAAT",11,56.43,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TCAAGTACTCGAAAAT",2,0.68,NA,NA,NA,NA,NA,NA,"stop","C6S A14N Q84* E141Y",4
"lib2","SARS-CoV-2","TCAAGTACTTTCTAAT",16,685.81,8.48,-2.35,0.07,2.26,1.08,0,"1 nonsynonymous","Q176W",1
"lib2","SARS-CoV-2","TCAAGTAGAAACTATC",17,26.44,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","C6G T15F L57H Y91G G101H",5
"lib2","SARS-CoV-2","TCAAGTATTTATAGAA",1,23.43,10.23,-0.6,0.06,2.95,1.08,0,">1 nonsynonymous","I2F K87L F134S",3
"lib2","SARS-CoV-2","TCAAGTCACTCTTATG",15,279.52,8.14,-2.7,0.12,2.12,1.04,0.01,">1 nonsynonymous","S113L K128P",2
"lib2","SARS-CoV-2","TCAAGTCCAACGTCCA",9,93.39,9.04,-1.8,0.05,2.85,1.05,0,">1 nonsynonymous","R78C F134A T170K",3
"lib2","SARS-CoV-2","TCAAGTCCTCTTTAAA",16,12.99,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","T15S A42T K56A P96M G117M L162H Y175L",7
"lib2","SARS-CoV-2","TCAAGTCGGACCTACA",10,54.17,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","Y50R A105D",2
"lib2","SARS-CoV-2","TCAAGTGCTTAAAAGT",7,55.69,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T15C I80G G83N Q144N",4
"lib2","SARS-CoV-2","TCAAGTGTAATACAGG",2,71.91,10.78,-0.05,0.06,2.91,1.11,0,"1 nonsynonymous","A18S",1
"lib2","SARS-CoV-2","TCAAGTGTAGGTAAAC",2,6.64,7.49,-3.34,0.46,2.44,1.16,0.07,">1 nonsynonymous","V32L R127Y A145M A190M",4
"lib2","SARS-CoV-2","TCAAGTTAGAGCTACC",9,97.91,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","L131D",1
"lib2","SARS-CoV-2","TCAAGTTCTGAGTCAT",3,70.64,10.86,0.02,0.06,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAAGTTGTACTAAAT",3,9.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W D90K I104K",3
"lib2","SARS-CoV-2","TCAAGTTTAAACTCAT",2,39.07,8.33,-2.51,0.13,2.58,1.11,0.01,">1 nonsynonymous","V77M N118K",2
"lib2","SARS-CoV-2","TCAATAAATAAACCAG",1,0.62,NA,NA,NA,NA,NA,NA,"stop","R25I C61* N120R E141H C158L",5
"lib2","SARS-CoV-2","TCAATAAATACGTCGC",4,12.01,6.09,-4.75,0.79,1.5,1.13,0.02,">1 nonsynonymous","Y35F L60S A105Q S139C",4
"lib2","SARS-CoV-2","TCAATAACAACCACGT",3,42.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2H N120V G146R Y178D",4
"lib2","SARS-CoV-2","TCAATAACACCATTCC",3,0.83,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib2","SARS-CoV-2","TCAATAACATACGTAT",7,44.23,6.08,-4.76,1.24,1.5,1.19,0.04,">1 nonsynonymous","A105P N151K N157S",3
"lib2","SARS-CoV-2","TCAATAACGCGACATG",2,0,NA,NA,NA,NA,NA,NA,"stop","P54L N107W F167*",3
"lib2","SARS-CoV-2","TCAATAACTTTAGTCT",10,25.8,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6S G101N",2
"lib2","SARS-CoV-2","TCAATAAGAAATAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* K199T",2
"lib2","SARS-CoV-2","TCAATAAGTGCCTAGA",1,10.27,6.07,-4.76,2,1.5,1.35,0.08,">1 nonsynonymous","V65M V77W",2
"lib2","SARS-CoV-2","TCAATAATACAGGCGC",11,234.51,10.83,-0.01,0.03,2.92,1.09,0,"1 nonsynonymous","N130H",1
"lib2","SARS-CoV-2","TCAATAATACCAAGTT",5,33.3,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","G9L G51V D98P G146C",4
"lib2","SARS-CoV-2","TCAATAATCAATAATT",3,61.08,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S139E G172V",2
"lib2","SARS-CoV-2","TCAATAATGAGTGTGT",4,38.53,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","E10L S69E V103G",3
"lib2","SARS-CoV-2","TCAATAATGGCTCAAT",3,7.75,7.18,-3.66,0.98,1.5,1.02,0.05,">1 nonsynonymous","I28S F47R D98F F167Y",4
"lib2","SARS-CoV-2","TCAATACAAATCAGTA",4,5.79,6.56,-4.27,1.47,1.5,1.06,0.05,">1 nonsynonymous","A33V D98L K114H S129M G146Q V181L",6
"lib2","SARS-CoV-2","TCAATACAAGATTTAC",6,1.06,NA,NA,NA,NA,NA,NA,"stop","Y91* N120H Q144D Y175G K198R",5
"lib2","SARS-CoV-2","TCAATACACCACTGGT",3,20.14,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","W23K I28G D68G T100Y S113R S139G P177S",7
"lib2","SARS-CoV-2","TCAATACATAGAACGT",10,76.83,10.85,0.01,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATACATGTATCCC",6,89.25,10.86,0.02,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATACCTAAGATGC",2,2.22,NA,NA,NA,NA,NA,NA,"stop","T15N T140E L162S Q176*",4
"lib2","SARS-CoV-2","TCAATACCTGACGCTA",3,32.25,9.78,-1.06,0.17,2.18,1.03,0.01,">1 nonsynonymous","N107P N130F",2
"lib2","SARS-CoV-2","TCAATACGGTGTATTA",2,38.27,9.99,-0.85,0.04,2.97,1.02,0,">1 nonsynonymous","Y121V T201L",2
"lib2","SARS-CoV-2","TCAATACTCATGACAT",2,5.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A67P S108D K132E",3
"lib2","SARS-CoV-2","TCAATACTTGTCCAGA",13,40.1,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G51Y F99G",2
"lib2","SARS-CoV-2","TCAATAGAAGCTGGTA",1,16.82,8.13,-2.7,0.45,1.51,1.13,0.07,">1 nonsynonymous","L60P G146L Q168H",3
"lib2","SARS-CoV-2","TCAATAGATAACTAAT",20,151.78,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37R Y91K D137W K199M",4
"lib2","SARS-CoV-2","TCAATAGCCCACAAAA",16,171.63,9.59,-1.25,0.06,1.89,1.09,0,">1 nonsynonymous","V37I C49I",2
"lib2","SARS-CoV-2","TCAATAGGGTGGAGCA",4,24.56,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","E10Q K94L N107F S139M K198P",5
"lib2","SARS-CoV-2","TCAATAGTAAGCATTT",3,58.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N58C W106G E141D N157H",4
"lib2","SARS-CoV-2","TCAATAGTGTCCCGTT",6,18.57,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","A14R L95H",2
"lib2","SARS-CoV-2","TCAATAGTTACCTTGT",5,24.07,9.27,-1.56,0.09,2.98,1.12,0,">1 nonsynonymous","A145S E154Q G166V",3
"lib2","SARS-CoV-2","TCAATAGTTTCTTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35M F99C F156L",3
"lib2","SARS-CoV-2","TCAATATAACACCTAG",6,236.62,10.19,-0.65,0.02,2.95,1.03,0,">1 nonsynonymous","K87Q T100Q",2
"lib2","SARS-CoV-2","TCAATATAATCTTAAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCAATATACATCATGT",11,44.05,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","G101N S139N F160L",3
"lib2","SARS-CoV-2","TCAATATACGACAATA",8,39.65,9.09,-1.74,0.11,1.52,1.11,0.01,">1 nonsynonymous","D59T P82I D97M N120D",4
"lib2","SARS-CoV-2","TCAATATAGAAAACAA",9,51.82,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","C6S F134T G146E G174R",4
"lib2","SARS-CoV-2","TCAATATATATTAAAA",17,150.29,8.79,-2.04,0.06,2.85,1.03,0,">1 nonsynonymous","N1T Y50F Y119C T201L",4
"lib2","SARS-CoV-2","TCAATATATCGCCGGT",9,28.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D98L R124S K199Y",3
"lib2","SARS-CoV-2","TCAATATCACATTAGC",2,0,NA,NA,NA,NA,NA,NA,"stop","A14S A42* C158L",3
"lib2","SARS-CoV-2","TCAATATCATGACAGT",7,62.31,9.71,-1.13,0.13,1.69,1.06,0.01,">1 nonsynonymous","P96L E154V",2
"lib2","SARS-CoV-2","TCAATATCTTAAGCAA",5,102.69,9.82,-1.02,0.05,2.28,1.04,0,"1 nonsynonymous","V11Q",1
"lib2","SARS-CoV-2","TCAATATTAATACCCG",2,24.69,8.85,-1.99,0.23,1.5,1.04,0.02,">1 nonsynonymous","S43P G51N P96L",3
"lib2","SARS-CoV-2","TCAATATTGACATTGA",7,38.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63C G101S F126A C150R S184T",5
"lib2","SARS-CoV-2","TCAATATTGTGAACGT",3,82.04,7.81,-3.03,0.12,1.87,1.04,0,">1 nonsynonymous","A89S G146I",2
"lib2","SARS-CoV-2","TCAATCAAATTACTGT",1,36.4,8.44,-2.39,0.13,2.82,1.03,0.01,">1 nonsynonymous","T55L S113I",2
"lib2","SARS-CoV-2","TCAATCAAGAGTGAAA",1,40.84,8.63,-2.21,0.13,2.79,1.06,0.01,">1 nonsynonymous","I2F A18P N157E",3
"lib2","SARS-CoV-2","TCAATCAATTATAACC",3,31.28,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F12R R16S T46Q N120P P161Y",5
"lib2","SARS-CoV-2","TCAATCACAATCTTAT",1,5.21,7.39,-3.45,0.58,1.5,1.29,0.06,">1 nonsynonymous","N40T S139L N157T",3
"lib2","SARS-CoV-2","TCAATCACCCTATTGA",9,47.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K114N G116T P161M",3
"lib2","SARS-CoV-2","TCAATCACGAGTTACT",1,34.47,10.73,-0.11,0.05,2.99,1.04,0,"1 nonsynonymous","N4T",1
"lib2","SARS-CoV-2","TCAATCACGATTAAAT",13,178.75,7.62,-3.21,0.29,1.5,1.07,0.03,">1 nonsynonymous","I28H L60Y I80L K128L T201Q",5
"lib2","SARS-CoV-2","TCAATCACGGAAAAAT",10,67.13,6.39,-4.44,0.43,1.5,1.17,0.01,">1 nonsynonymous","Y50L S129L",2
"lib2","SARS-CoV-2","TCAATCACGGATTACC",1,11.35,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","TCAATCACGGTAGGGT",2,32.43,9.7,-1.14,0.12,1.93,1.02,0.01,"1 nonsynonymous","P82L",1
"lib2","SARS-CoV-2","TCAATCACTCGCTAAT",9,154.63,10.81,-0.02,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATCACTTCAACTG",2,49.62,9.08,-1.75,0.03,2.97,1.03,0,">1 nonsynonymous","Y119V E141S",2
"lib2","SARS-CoV-2","TCAATCAGCGCTGATT",17,161.93,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","E10G I88K",2
"lib2","SARS-CoV-2","TCAATCATAATATTTA",1,1.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T T46S V71E",3
"lib2","SARS-CoV-2","TCAATCATTAAAACAG",3,28.38,9.4,-1.43,0.17,1.7,1.04,0.01,">1 nonsynonymous","S36K S41I A89I",3
"lib2","SARS-CoV-2","TCAATCATTCAAACTT",9,157.02,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","S45C L122K K128D G172Y H189R",5
"lib2","SARS-CoV-2","TCAATCCATAACTGTT",6,0.44,NA,NA,NA,NA,NA,NA,"stop","L60* F99I R136I",3
"lib2","SARS-CoV-2","TCAATCCATCTTTACT",1,23.13,6.24,-4.6,0.81,1.5,1.2,0.03,">1 nonsynonymous","R25M S164H G174L",3
"lib2","SARS-CoV-2","TCAATCCCACGCCGGG",13,191.79,10.25,-0.58,0.05,2.85,1.05,0,"1 nonsynonymous","E10Y",1
"lib2","SARS-CoV-2","TCAATCCCTGGTTTCG",5,3.16,NA,NA,NA,NA,NA,NA,"stop","I2H Y21*",2
"lib2","SARS-CoV-2","TCAATCCGTTAACCAG",8,92.41,10.46,-0.38,0.04,2.98,1.02,0,">1 nonsynonymous","R27H I142Y",2
"lib2","SARS-CoV-2","TCAATCCTCCAATTGT",3,3.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103E",1
"lib2","SARS-CoV-2","TCAATCCTGATCATCT",2,56.48,10.23,-0.61,0.05,2.7,1.05,0,">1 nonsynonymous","Y91V S200I",2
"lib2","SARS-CoV-2","TCAATCCTTCGACTGC",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F8C A33* Y91W P96R S113E",5
"lib2","SARS-CoV-2","TCAATCCTTTGCCATT",1,28,6,-4.84,2,3,1.14,0,">1 nonsynonymous","F12S D75R Y159N P177T",4
"lib2","SARS-CoV-2","TCAATCGAAAAAAAAG",5,15.01,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","Q84S K94P T100G",3
"lib2","SARS-CoV-2","TCAATCGAAACCCTAC",6,25.84,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","D59W R127T",2
"lib2","SARS-CoV-2","TCAATCGAGAGAAATA",4,59.59,6,-4.84,2,3,1.13,0,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","TCAATCGAGTAATTAA",2,33.23,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","F44N I80W",2
"lib2","SARS-CoV-2","TCAATCGATATGACGC",2,29.95,9.82,-1.01,0.11,2.68,1.1,0.01,">1 nonsynonymous","A33N C61V K128S G166A",4
"lib2","SARS-CoV-2","TCAATCGCGTGGATCG",1,18.12,10.74,-0.1,0.11,2.72,1.23,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCAATCTAAAAGGAAA",9,75.85,8.03,-2.81,0.19,1.76,1.13,0.02,">1 nonsynonymous","F12R T170M",2
"lib2","SARS-CoV-2","TCAATCTAACAGACCC",9,106.98,10.75,-0.09,0.03,2.9,1.1,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","TCAATCTCCTGCTGTA",5,55.56,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4L A14V Y119F T170M",4
"lib2","SARS-CoV-2","TCAATCTGCCTTAAAT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","V37Q D97Y Y121K Y175* K199F",5
"lib2","SARS-CoV-2","TCAATCTGCTACATAG",12,138.22,8.25,-2.58,0.31,1.5,1.02,0.04,">1 nonsynonymous","T55R Y93L",2
"lib2","SARS-CoV-2","TCAATCTTACCAAGTG",4,81.2,7.87,-2.97,0.13,1.84,1.11,0.01,"1 nonsynonymous","D112A",1
"lib2","SARS-CoV-2","TCAATCTTTGGGCTAT",16,4.08,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TCAATCTTTTTTAATA",13,259.83,10.04,-0.8,0.04,2.61,1.04,0,">1 nonsynonymous","S45L N151M",2
"lib2","SARS-CoV-2","TCAATGAATTGTGTCA",4,45.47,10.71,-0.13,0.03,3,1.01,0,">1 nonsynonymous","K87Y K128I",2
"lib2","SARS-CoV-2","TCAATGACAGACGGAG",5,2.32,NA,NA,NA,NA,NA,NA,"stop","Q168* V173S",2
"lib2","SARS-CoV-2","TCAATGACGGGCTATA",13,2.08,NA,NA,NA,NA,NA,NA,"stop","R27M P161* T201V",3
"lib2","SARS-CoV-2","TCAATGAGAACCAAAA",2,18.47,9.87,-0.96,0.18,2.09,1,0.01,">1 nonsynonymous","L60R S139Y",2
"lib2","SARS-CoV-2","TCAATGAGACACCACC",4,39.35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N40D V103G G166V",3
"lib2","SARS-CoV-2","TCAATGAGCGACCTTA",5,44.12,8.6,-2.24,0.38,1.5,1.09,0.07,">1 nonsynonymous","V181S T201S",2
"lib2","SARS-CoV-2","TCAATGAGTGATCATG",3,134.35,8.44,-2.4,0.13,2.78,1.04,0.01,">1 nonsynonymous","T63S S113F",2
"lib2","SARS-CoV-2","TCAATGAGTGTCCTAG",1,9.6,10.38,-0.45,0.17,2.63,1,0.02,">1 nonsynonymous","N58T D59H S184F",3
"lib2","SARS-CoV-2","TCAATGCAGAAGGTGG",8,44.72,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","D68R R127L G166W",3
"lib2","SARS-CoV-2","TCAATGCAGACTAGGA",3,26.18,9.13,-1.7,0.1,1.81,1.17,0,">1 nonsynonymous","Y35N S43N D90T Y123K",4
"lib2","SARS-CoV-2","TCAATGCAGCCGTGGA",1,12.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5H G51F A105I L125S",4
"lib2","SARS-CoV-2","TCAATGCATGAAGTTT",9,95.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C6S F12L Y50S D98G",4
"lib2","SARS-CoV-2","TCAATGCCCACAATAG",2,29.37,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","A14C R127W",2
"lib2","SARS-CoV-2","TCAATGCCCTCGTACG",1,37.7,10.74,-0.1,0.05,3,1.03,0,">1 nonsynonymous","S43A F160L",2
"lib2","SARS-CoV-2","TCAATGCCGAGGAATG",9,98.32,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V32K N118Y L131A S139M N151K",5
"lib2","SARS-CoV-2","TCAATGCCGCGCAGCA",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8W F44S K56V R179K",4
"lib2","SARS-CoV-2","TCAATGCCGGATGTTC",2,175.72,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58R D90S F126A Y175D P197S",5
"lib2","SARS-CoV-2","TCAATGCCGTAGGGCA",4,34.47,9.58,-1.25,0.08,2.95,1.06,0,">1 nonsynonymous","N64R Y119S G166S",3
"lib2","SARS-CoV-2","TCAATGCCGTATAGCA",19,2.51,NA,NA,NA,NA,NA,NA,"stop","S53H D59K D137* C158L",4
"lib2","SARS-CoV-2","TCAATGCGAGTACCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L125*",1
"lib2","SARS-CoV-2","TCAATGGAAAACTTCA",23,2.92,NA,NA,NA,NA,NA,NA,"stop","G9* T100M G146A C150V C195W",5
"lib2","SARS-CoV-2","TCAATGGTAAGAACCA",7,62.67,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","G86R T100S T148I G174S",4
"lib2","SARS-CoV-2","TCAATGTAAATCAACT",7,19.98,6.74,-4.1,0.2,1.65,1.07,0.01,">1 nonsynonymous","S19E S129T A145R",3
"lib2","SARS-CoV-2","TCAATGTACACTCCCC",2,71.6,10.7,-0.14,0.04,2.81,1.15,0,"1 nonsynonymous","D98G",1
"lib2","SARS-CoV-2","TCAATGTCTCATACAC",12,198.67,10.8,-0.03,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATGTGGACTATCC",2,40.25,10.43,-0.41,0.07,2.97,1.02,0,"1 nonsynonymous","S45K",1
"lib2","SARS-CoV-2","TCAATGTTACAAGATG",2,28.78,8.32,-2.52,0.12,2.66,1,0,">1 nonsynonymous","V37F Q168P",2
"lib2","SARS-CoV-2","TCAATGTTATTCCACA",1,11.91,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","S41L C49G Y91P A105D",4
"lib2","SARS-CoV-2","TCAATGTTCGAGTCGC",4,86.59,10.38,-0.45,0.05,2.89,1.02,0,"1 nonsynonymous","R127A",1
"lib2","SARS-CoV-2","TCAATGTTGGTTATCA",3,3.25,NA,NA,NA,NA,NA,NA,"stop","N118* G146L Q176*",3
"lib2","SARS-CoV-2","TCAATTAAAATCCACT",5,57.34,9.32,-1.52,0.09,2.8,1.06,0,">1 nonsynonymous","N24T D59M K87E Q168R",4
"lib2","SARS-CoV-2","TCAATTAACAACCGGA",14,212.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S53F C61N A145P L162R",4
"lib2","SARS-CoV-2","TCAATTAACCTTAAAG",5,57.31,9.23,-1.61,0.06,1.95,1.03,0,">1 nonsynonymous","N1L N107T",2
"lib2","SARS-CoV-2","TCAATTAAGACAATCA",1,82.78,NA,NA,NA,NA,NA,NA,"stop","T55C G83N V173*",3
"lib2","SARS-CoV-2","TCAATTAATTTTATTC",1,1.26,NA,NA,NA,NA,NA,NA,"stop","I2N S43A N130V G152V F160C Q163*",6
"lib2","SARS-CoV-2","TCAATTACACATAACT",7,118.42,10.04,-0.8,0.05,2.89,1.02,0,">1 nonsynonymous","T15L R27K G116L",3
"lib2","SARS-CoV-2","TCAATTACAGCTCGTA",2,12.22,10.81,-0.02,0.1,2.77,1.22,0,"1 nonsynonymous","F47W",1
"lib2","SARS-CoV-2","TCAATTACATGAAACA",3,38.67,10.79,-0.04,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATTACCTGCCCAA",1,18.51,8.55,-2.29,0.19,1.62,1.24,0.02,">1 nonsynonymous","S36K L131T G155A T201M",4
"lib2","SARS-CoV-2","TCAATTAGTAGTGGAA",6,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128V R136S Q168F",3
"lib2","SARS-CoV-2","TCAATTATACCTAAAA",2,23.4,10.9,0.07,0.09,2.94,1.1,0,">1 nonsynonymous","L5W K128N",2
"lib2","SARS-CoV-2","TCAATTATACTCACAA",20,80.29,6,-4.84,0.84,1.5,1.18,0.01,">1 nonsynonymous","N24H S41V V52P K87E V180K",5
"lib2","SARS-CoV-2","TCAATTATCCCCGAAC",1,22.92,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19K L38P C49S G83Y E141Y G155I",6
"lib2","SARS-CoV-2","TCAATTCAAGCATAAG",7,48.98,10.94,0.1,0.07,2.77,1.08,0,">1 nonsynonymous","R16K D97K",2
"lib2","SARS-CoV-2","TCAATTCAGCACAAGG",2,19.26,10.16,-0.68,0.09,2.23,1,0.01,">1 nonsynonymous","F44L I104S",2
"lib2","SARS-CoV-2","TCAATTCCTACAACCA",2,12.61,9.21,-1.63,0.08,2.95,1.02,0.01,">1 nonsynonymous","I2N Y119L",2
"lib2","SARS-CoV-2","TCAATTCGAACATTTG",5,55.16,6.28,-4.56,0.65,1.81,1.27,0.02,">1 nonsynonymous","G51T W106V D112K S184L",4
"lib2","SARS-CoV-2","TCAATTCGTCTTAAAT",3,0.46,NA,NA,NA,NA,NA,NA,"stop","K94* G101D I104D V153N G196K",5
"lib2","SARS-CoV-2","TCAATTCGTTACGCAT",5,20.82,10.88,0.05,0.06,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAATTCTGACCGTGG",4,5.45,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S36T G83F V103L Y143V P149R",5
"lib2","SARS-CoV-2","TCAATTCTTGCCATAA",19,222.84,8.17,-2.67,0.26,1.5,1.01,0.03,">1 nonsynonymous","L5Y S29T K94I",3
"lib2","SARS-CoV-2","TCAATTGAGAAAGATA",16,174.64,10.08,-0.76,0.02,2.93,1.04,0,">1 nonsynonymous","K87N W106F",2
"lib2","SARS-CoV-2","TCAATTGTAATGATGT",1,4.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132R P149R F167L",3
"lib2","SARS-CoV-2","TCAATTGTCAAACACA",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21L T85S K114R G152R",4
"lib2","SARS-CoV-2","TCAATTGTCATATTCG",3,0,NA,NA,NA,NA,NA,NA,"stop","E10* N92* Y178G K198*",4
"lib2","SARS-CoV-2","TCAATTGTCTTGTTTG",6,111.07,10.22,-0.62,0.04,2.84,1.02,0,">1 nonsynonymous","N13Y N151Y",2
"lib2","SARS-CoV-2","TCAATTGTGCCCCCCA",4,118.46,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","I104C L122I P177V A192D",4
"lib2","SARS-CoV-2","TCAATTGTTACATCAT",4,71.49,8.99,-1.84,0.09,2.35,1.1,0,">1 nonsynonymous","Y121P P149L",2
"lib2","SARS-CoV-2","TCAATTTAGCCACTAG",5,69.08,9.08,-1.76,0.07,2.76,1.09,0,">1 nonsynonymous","K128I N171G",2
"lib2","SARS-CoV-2","TCAATTTATACAAGAT",5,27.47,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N1K D90C V115L K128C C158R",5
"lib2","SARS-CoV-2","TCAATTTCCTTCAGTA",6,22.63,7.33,-3.51,0.34,1.5,1.07,0.06,">1 nonsynonymous","D68G G83P",2
"lib2","SARS-CoV-2","TCAATTTGGTATCCAA",1,8.35,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","E10V S41R C49S Y66K L95F T201W",6
"lib2","SARS-CoV-2","TCAATTTTCTTTCATA",4,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2C P149S T170C",3
"lib2","SARS-CoV-2","TCACAAAATACACACA",3,109.53,10.49,-0.35,0.04,2.93,1.03,0,">1 nonsynonymous","S41P D97S",2
"lib2","SARS-CoV-2","TCACAAAATCCTGCCG",7,120.66,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A14S V37D K48L A89H Q176N",5
"lib2","SARS-CoV-2","TCACAAAATCGTTTAC",10,11.51,NA,NA,NA,NA,NA,NA,"stop","F62* A81W P177S",3
"lib2","SARS-CoV-2","TCACAAACACCTAGCT",3,114.35,10.32,-0.52,0.04,2.73,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACAAACATAAATCC",7,74.6,10.85,0.01,0.05,3,1.02,0,">1 nonsynonymous","I28M N120R",2
"lib2","SARS-CoV-2","TCACAAACCAGGAGAG",2,12.22,7.17,-3.67,0.32,1.5,1.12,0.03,">1 nonsynonymous","S45P I80L D98L Y123M P197L",5
"lib2","SARS-CoV-2","TCACAAAGGAAAAGTT",2,18.29,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A14N E76G L125P G166K",4
"lib2","SARS-CoV-2","TCACAAATATTAATCG",17,268.38,10.8,-0.03,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACAAATGTAACTAT",2,19.78,8.65,-2.18,0.19,1.61,1.04,0.01,">1 nonsynonymous","I28S C31Y F160Y K198M",4
"lib2","SARS-CoV-2","TCACAAATTAATCTAT",3,11.87,6.06,-4.78,1.2,1.5,1.09,0.02,">1 nonsynonymous","E10D K56I S113Y S139L",4
"lib2","SARS-CoV-2","TCACAAATTATCGCCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T Y123K I142S",3
"lib2","SARS-CoV-2","TCACAAATTCGGCGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","F12N P169*",2
"lib2","SARS-CoV-2","TCACAAATTTGCGGCA",1,59.18,10.77,-0.06,0.05,2.95,1.07,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","TCACAACAAGAATGGT",15,386.04,9.35,-1.48,0.07,2.46,1.07,0,">1 nonsynonymous","A81T G174T",2
"lib2","SARS-CoV-2","TCACAACACGCCTACA",10,1.29,NA,NA,NA,NA,NA,NA,"stop","G86P W106Q Y143*",3
"lib2","SARS-CoV-2","TCACAACATTATGCAG",11,102.44,10.56,-0.28,0.08,2.86,1.15,0,"1 nonsynonymous","F134S",1
"lib2","SARS-CoV-2","TCACAACATTTGGCAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","TCACAACCAAATTTTA",13,143.39,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K128L Q144F Y175D E186S",4
"lib2","SARS-CoV-2","TCACAACCCACCGAAA",4,31.5,10.69,-0.14,0.06,2.89,1.13,0,"1 nonsynonymous","V37Y",1
"lib2","SARS-CoV-2","TCACAACCGACAAACA",2,20.3,6.17,-4.66,0.43,1.5,1.11,0.01,">1 nonsynonymous","N40S G86L T140W",3
"lib2","SARS-CoV-2","TCACAACCTCCTGGTG",1,21.42,10.91,0.07,0.07,2.98,1.03,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","TCACAACCTGACCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P54L V77E P96M Y123* N157T Q176P",6
"lib2","SARS-CoV-2","TCACAACGAAGAAAGC",12,256.52,10.9,0.06,0.06,2.87,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACAACGTTATGAAA",8,85.04,10.95,0.11,0.04,2.95,1.03,0,">1 nonsynonymous","T100Y K114R",2
"lib2","SARS-CoV-2","TCACAACTACTTCCGG",4,1.56,NA,NA,NA,NA,NA,NA,"stop","G9V Y50* Q144L",3
"lib2","SARS-CoV-2","TCACAACTAGAGTAAA",2,2.93,NA,NA,NA,NA,NA,NA,"stop","F99A N157D Q163*",3
"lib2","SARS-CoV-2","TCACAACTATAAAGAC",5,37.21,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T55S A105S Y178P",3
"lib2","SARS-CoV-2","TCACAACTATAAGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61* A89L Y143I S147I P197L",5
"lib2","SARS-CoV-2","TCACAACTGAGCCAAA",6,37.06,6,-4.84,2,3,1.13,0,"1 nonsynonymous","F167K",1
"lib2","SARS-CoV-2","TCACAACTTACGAAAG",8,68.8,9.85,-0.98,0.11,1.97,1.1,0.01,">1 nonsynonymous","W23A K198R",2
"lib2","SARS-CoV-2","TCACAAGAACCGGATG",4,0,NA,NA,NA,NA,NA,NA,"stop","A22G K48L G83A L111* K198A",5
"lib2","SARS-CoV-2","TCACAAGAACGATAAC",8,41.5,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","C6T W106L P149F G166W",4
"lib2","SARS-CoV-2","TCACAAGACACGCGGG",1,7.74,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","Y35V A89P D90N P161N",4
"lib2","SARS-CoV-2","TCACAAGAGTCGTATT",9,210.26,10.43,-0.41,0.02,2.94,1.06,0,">1 nonsynonymous","Q144K G174N S200P",3
"lib2","SARS-CoV-2","TCACAAGATAATGAGA",3,31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22Q I28D T55R D98F",4
"lib2","SARS-CoV-2","TCACAAGCAAAAAAAA",6,5.18,NA,NA,NA,NA,NA,NA,"stop","K94W C195*",2
"lib2","SARS-CoV-2","TCACAAGCGAGTTGAG",2,41.46,10.71,-0.13,0.05,2.96,1.04,0,">1 nonsynonymous","N4K V37S R78F",3
"lib2","SARS-CoV-2","TCACAAGGCTACTCGC",5,24.87,6.03,-4.8,0.96,1.5,1.09,0.02,">1 nonsynonymous","S36Y N64R E154C P161T P169L",5
"lib2","SARS-CoV-2","TCACAAGGGCAATTAA",4,47.45,10.43,-0.41,0.06,2.85,1.1,0,"1 nonsynonymous","I138F",1
"lib2","SARS-CoV-2","TCACAAGGGTTTCCGT",8,158.87,10.42,-0.42,0.04,2.94,1.06,0,">1 nonsynonymous","L5K F12M",2
"lib2","SARS-CoV-2","TCACAAGGTATTCCTT",3,39.58,10.5,-0.34,0.06,2.86,1.08,0,">1 nonsynonymous","A81R P149K",2
"lib2","SARS-CoV-2","TCACAAGTAATAGGGC",6,76.45,10.39,-0.44,0.07,2.91,1.12,0,">1 nonsynonymous","T63I F156P",2
"lib2","SARS-CoV-2","TCACAATAGATGATGG",2,42.47,10.2,-0.63,0.08,2.77,1.01,0,">1 nonsynonymous","L60M Y91R",2
"lib2","SARS-CoV-2","TCACAATATTAGAGAC",6,69.28,10.73,-0.1,0.04,2.94,1.07,0,">1 nonsynonymous","R16C T201K",2
"lib2","SARS-CoV-2","TCACAATCCAAAAAAG",9,126.24,10.86,0.02,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACAATCGCTTAAGG",1,5.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S113W F160I",2
"lib2","SARS-CoV-2","TCACAATGCAGAGGCT",4,0.52,NA,NA,NA,NA,NA,NA,"stop","L5* D90L D137N V153S",4
"lib2","SARS-CoV-2","TCACAATTCACTCGAG",3,31.07,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A105F C158I T201S",3
"lib2","SARS-CoV-2","TCACACAAAACCTTGG",2,44.63,10.77,-0.06,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACACAAGGACACGA",6,0.2,NA,NA,NA,NA,NA,NA,"stop","E10H N64Q K94* S113E",4
"lib2","SARS-CoV-2","TCACACACAAAGAAAT",6,119.22,9.88,-0.96,0.04,2.02,1.05,0,">1 nonsynonymous","G51C E76D S139T",3
"lib2","SARS-CoV-2","TCACACACGAAAAAAA",10,57.96,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F44L D90P",2
"lib2","SARS-CoV-2","TCACACAGGACGACTA",7,7.83,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T15F C61F A105K S129Y L162W",5
"lib2","SARS-CoV-2","TCACACAGGAGGCTTA",4,99.29,10.73,-0.11,0.08,2.74,1.11,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","TCACACATGAAATACA",13,471.59,9.32,-1.52,0.03,2.84,1.07,0,">1 nonsynonymous","N120S T140L T170F",3
"lib2","SARS-CoV-2","TCACACATGCCTAAAT",7,85.35,9.79,-1.05,0.08,2.15,1.07,0,"1 nonsynonymous","F12A",1
"lib2","SARS-CoV-2","TCACACATTCGTCACC",2,12.19,10.65,-0.19,0.1,2.94,1.06,0,"1 nonsynonymous","E135M",1
"lib2","SARS-CoV-2","TCACACCATCTCAAAG",9,0.99,NA,NA,NA,NA,NA,NA,"stop","I88* G155L",2
"lib2","SARS-CoV-2","TCACACCATTAGGCTG",7,2.02,NA,NA,NA,NA,NA,NA,"stop","R25T K128*",2
"lib2","SARS-CoV-2","TCACACCTTTACCTAT",2,11.73,10.45,-0.39,0.33,1.68,1.19,0.05,">1 nonsynonymous","E10K N40K L60V V77A",4
"lib2","SARS-CoV-2","TCACACGATTCGCCTA",3,85.5,10.53,-0.31,0.06,2.77,1.03,0,">1 nonsynonymous","Y123L N171S",2
"lib2","SARS-CoV-2","TCACACGCAAGTATAT",16,129.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4A G86R",2
"lib2","SARS-CoV-2","TCACACGCACCTTGTC",1,49.36,10.76,-0.07,0.05,2.92,1.08,0,">1 nonsynonymous","V11I S43K",2
"lib2","SARS-CoV-2","TCACACGCCAAGCCAG",1,12.26,10.21,-0.63,0.04,2.96,1.02,0,">1 nonsynonymous","A42S A145T Q168A",3
"lib2","SARS-CoV-2","TCACACGGAATGGTAT",5,23.28,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6R L57C Y93D A105V P169Q",5
"lib2","SARS-CoV-2","TCACACGTACGTTGAA",15,168.95,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","D112T F167C",2
"lib2","SARS-CoV-2","TCACACGTAGATCCTA",4,77.83,10.82,-0.01,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACACGTCTTCATTG",8,44.92,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S45L C49S C150T",3
"lib2","SARS-CoV-2","TCACACTACGATAAGA",4,54.14,10.74,-0.1,0.04,2.96,1.04,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","TCACACTACTCGCACA",6,105.08,10.69,-0.15,0.02,2.96,1.02,0,">1 nonsynonymous","S41P T201N",2
"lib2","SARS-CoV-2","TCACACTAGTGACCCA",5,111.1,8.2,-2.64,0.19,1.5,1.13,0.02,">1 nonsynonymous","G9E E141G F160E Q176R P197N",5
"lib2","SARS-CoV-2","TCACACTATCGTGATG",8,92.23,8.81,-2.03,0.04,2.67,1.09,0,">1 nonsynonymous","N4V A22S G117S",3
"lib2","SARS-CoV-2","TCACACTATGGCCTGT",1,7.96,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","R73I L95H",2
"lib2","SARS-CoV-2","TCACACTCTTTACACT",3,3.86,NA,NA,NA,NA,NA,NA,"stop","G51S Q163*",2
"lib2","SARS-CoV-2","TCACACTGGCGGCTTA",11,135.19,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V32T A42L V65P V77S Q144M",5
"lib2","SARS-CoV-2","TCACACTTAATAGTAT",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76G E141K N151I",3
"lib2","SARS-CoV-2","TCACAGAAGCGGATAC",2,43.64,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","L60M I80S Y178T K199N",4
"lib2","SARS-CoV-2","TCACAGACACGCTCGC",2,11.71,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F70E G86L D90I V173Y",4
"lib2","SARS-CoV-2","TCACAGACCAAACGGC",4,118.41,10.84,0,0.03,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACAGACTACGGACT",5,103.73,10.8,-0.03,0.03,2.97,1.04,0,">1 nonsynonymous","G9A T63S K128R",3
"lib2","SARS-CoV-2","TCACAGAGAGGCAACA",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A81P A89H V103* R179L",4
"lib2","SARS-CoV-2","TCACAGAGTAAGTGGT",11,66.65,7.84,-2.99,0.22,1.5,1.15,0.02,">1 nonsynonymous","A14R S45F Y121S",3
"lib2","SARS-CoV-2","TCACAGATAACCAGAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43T N107P R124V",3
"lib2","SARS-CoV-2","TCACAGATCCCCTTTC",9,91.63,9.99,-0.85,0.09,2.04,1.07,0,">1 nonsynonymous","F17P C61R S164R",3
"lib2","SARS-CoV-2","TCACAGATTCATCCCA",10,25.24,6,-4.84,1.97,3,1.15,0.01,">1 nonsynonymous","V77F F99I A105E G117N F126M F185G",6
"lib2","SARS-CoV-2","TCACAGCAATAGTCAG",18,1.96,NA,NA,NA,NA,NA,NA,"stop","P54* T148E",2
"lib2","SARS-CoV-2","TCACAGCAGTACAAAG",2,14.38,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","L60F R127M G155M",3
"lib2","SARS-CoV-2","TCACAGCTAAAAAATT",4,3.4,NA,NA,NA,NA,NA,NA,"stop","L5* C49M A105R",3
"lib2","SARS-CoV-2","TCACAGGACCAACGCC",6,19.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T S41L S113N L131W",4
"lib2","SARS-CoV-2","TCACAGGCATTCGACC",13,117.79,9.97,-0.87,0.06,2.05,1.02,0,">1 nonsynonymous","V37S L60R D90S G152Y A190S",5
"lib2","SARS-CoV-2","TCACAGGGAGAACAGT",14,120.14,6,-4.84,1.99,1.5,1.21,0.02,">1 nonsynonymous","F17L Y143Q",2
"lib2","SARS-CoV-2","TCACAGGTTATTTGAG",3,62.24,8.35,-2.49,0.12,2.42,1.07,0,">1 nonsynonymous","V11I D90E T100D L125Q F160V",5
"lib2","SARS-CoV-2","TCACAGTTGAAAATCG",1,13.09,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","I72D R78L G86F T100G N107D",5
"lib2","SARS-CoV-2","TCACATAATTGGACAA",4,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105Q L122P S139W F160S F167S",5
"lib2","SARS-CoV-2","TCACATACACCAACAA",2,28.92,9.84,-0.99,0.05,2.92,1.09,0,">1 nonsynonymous","E10S E141N E154V",3
"lib2","SARS-CoV-2","TCACATACACGATTTA",10,79.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T100A D137S C150G",3
"lib2","SARS-CoV-2","TCACATACATAATAGA",17,120.66,9.17,-1.67,0.1,2.11,1.1,0,">1 nonsynonymous","N58C K87M F185A",3
"lib2","SARS-CoV-2","TCACATACGTTAACAC",1,42.07,8.99,-1.84,0.06,2.93,1.09,0,">1 nonsynonymous","L60K Y119I",2
"lib2","SARS-CoV-2","TCACATAGAGAGTGAT",4,38.61,10.23,-0.6,0.07,2.69,1,0,"1 nonsynonymous","D34T",1
"lib2","SARS-CoV-2","TCACATATACCTTACA",11,63.06,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2V S43L A81D G86T K94I I142A G155I G172L",8
"lib2","SARS-CoV-2","TCACATATATGTTAGT",2,27.55,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","G86D C150S G155L",3
"lib2","SARS-CoV-2","TCACATATCTATGCCA",6,159.41,10.79,-0.05,0.04,2.88,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACATATGATAAGGA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L Y123* Y143L",3
"lib2","SARS-CoV-2","TCACATATGATCTTAG",4,92.05,9.96,-0.87,0.06,2.54,1,0,">1 nonsynonymous","D97I A105M",2
"lib2","SARS-CoV-2","TCACATATTTATCACA",2,4.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V C158V",2
"lib2","SARS-CoV-2","TCACATCACCCATATC",4,141.88,8.02,-2.81,0.16,1.83,1.14,0.01,">1 nonsynonymous","G86N G174M T201M",3
"lib2","SARS-CoV-2","TCACATCAGAACAAGT",1,13.33,7.95,-2.89,0.41,1.5,1.27,0.03,">1 nonsynonymous","W23L G116D",2
"lib2","SARS-CoV-2","TCACATCAGTGAGCAG",14,404.34,10.41,-0.43,0.02,2.9,1.07,0,">1 nonsynonymous","S36P N58K",2
"lib2","SARS-CoV-2","TCACATCCAAGAGGAC",7,100.97,10.91,0.07,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACATCCACCAGAAC",1,5.25,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","K94T A145R P197A",3
"lib2","SARS-CoV-2","TCACATCGAACCGGTA",9,125.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D137L H189C",2
"lib2","SARS-CoV-2","TCACATCGGCAATTCG",2,67.11,10.45,-0.38,0.04,2.97,1.06,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","TCACATGAGTTGTTTA",4,80.58,10.76,-0.08,0.05,2.92,1.09,0,">1 nonsynonymous","N151F T201L",2
"lib2","SARS-CoV-2","TCACATGATGAAATAG",4,74.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59C F70P",2
"lib2","SARS-CoV-2","TCACATGGCAAAAGTA",3,25.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128D V181N",2
"lib2","SARS-CoV-2","TCACATGGGCGGTAAC",6,16.69,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","A14N P161S Q168F F185E",4
"lib2","SARS-CoV-2","TCACATGTAAACTTAG",4,17.31,9.68,-1.16,0.09,2.42,1,0.01,">1 nonsynonymous","C6I A145G",2
"lib2","SARS-CoV-2","TCACATGTCATTCTTA",2,56.79,10.14,-0.7,0.07,2.43,1.03,0,">1 nonsynonymous","T63D P96S T140I",3
"lib2","SARS-CoV-2","TCACATGTGAAAGGAC",2,42.39,6.8,-4.04,0.34,1.5,1.13,0.02,">1 nonsynonymous","I28S D97V Y123S G152S",4
"lib2","SARS-CoV-2","TCACATTAATAAATAA",4,51.82,9.85,-0.99,0.05,2.01,1.01,0,">1 nonsynonymous","K48L Y91R",2
"lib2","SARS-CoV-2","TCACATTACGATAAAC",2,30.35,9.03,-1.8,0.07,2.89,1.05,0,"1 nonsynonymous","Y143T",1
"lib2","SARS-CoV-2","TCACATTACGTCTTCG",8,45.9,10.71,-0.13,0.06,3,1.02,0,">1 nonsynonymous","L5F G83N E141D",3
"lib2","SARS-CoV-2","TCACATTCATTACACG",12,0.56,NA,NA,NA,NA,NA,NA,"stop","A105* N120D E154D T201K",4
"lib2","SARS-CoV-2","TCACATTGAATTTTGC",4,58.98,6.08,-4.75,0.64,1.5,1.12,0.01,">1 nonsynonymous","N58S A105F Y123E",3
"lib2","SARS-CoV-2","TCACATTGATCTCAAA",3,23.66,9.17,-1.67,0.16,1.6,1.15,0.01,">1 nonsynonymous","T100G I142H",2
"lib2","SARS-CoV-2","TCACATTGGTACTACA",2,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R T46Q G83T F99T",4
"lib2","SARS-CoV-2","TCACATTTAATTTAAT",2,36.59,10.73,-0.1,0.04,3,1.02,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","TCACATTTCCGCCACT",1,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S P54I F70A G74A G117H K198M",6
"lib2","SARS-CoV-2","TCACCAAAACGATGTC",5,0,NA,NA,NA,NA,NA,NA,"stop","I2E F8* Y159S",3
"lib2","SARS-CoV-2","TCACCAAAACGTTCTT",1,22.31,9.03,-1.81,0.07,3,1.04,0,">1 nonsynonymous","T100K G146E",2
"lib2","SARS-CoV-2","TCACCAAAATTTCACC",10,31.15,6,-4.84,2,3,1.31,0.01,">1 nonsynonymous","P7L V103Y",2
"lib2","SARS-CoV-2","TCACCAAATCACCACC",5,169.29,10.21,-0.63,0.03,2.86,1.03,0,">1 nonsynonymous","T15L T55N F160L",3
"lib2","SARS-CoV-2","TCACCAACACTTCAGT",3,88.16,10.28,-0.56,0.04,2.84,1.06,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TCACCAACTATCTCCT",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10G A14P I72S D90S R136L",6
"lib2","SARS-CoV-2","TCACCAAGGCTAAGGT",1,8.63,10.22,-0.62,0.09,3,1.03,0,">1 nonsynonymous","N64C F134A L187I",3
"lib2","SARS-CoV-2","TCACCAAGTGACAAAT",9,9.05,7.49,-3.35,0.82,3,1,0.01,">1 nonsynonymous","A42L V65T C150M V181R P197V",5
"lib2","SARS-CoV-2","TCACCAAGTGCGCACA",3,5.5,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D112R G146T",2
"lib2","SARS-CoV-2","TCACCACAAAGGCTCT",4,50.52,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N4F A105G P133N",3
"lib2","SARS-CoV-2","TCACCACAAGAACAAT",5,1.32,NA,NA,NA,NA,NA,NA,"stop","N1S A14F C49F Y66G T170*",5
"lib2","SARS-CoV-2","TCACCACACAGCATCA",2,1.57,NA,NA,NA,NA,NA,NA,"stop","Y35H L60M S69* P96Y F99V K128I Y143I P149*",8
"lib2","SARS-CoV-2","TCACCACACTGGAATG",3,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T N157S",2
"lib2","SARS-CoV-2","TCACCACCAATATGAT",2,12.94,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K56S G74T W106E",3
"lib2","SARS-CoV-2","TCACCACCAGAAAACG",4,39.73,10.77,-0.07,0.02,2.92,1.08,0,"1 nonsynonymous","Q163I",1
"lib2","SARS-CoV-2","TCACCACCAGGACCCA",17,238.13,10.15,-0.69,0.06,2.46,1.07,0,">1 nonsynonymous","W106L L122G",2
"lib2","SARS-CoV-2","TCACCACCTATATATA",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23S Y119T E141S V173P",4
"lib2","SARS-CoV-2","TCACCACGGCGCCGGA",19,178.64,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","L38S V182M",2
"lib2","SARS-CoV-2","TCACCACTTATCTAAA",8,84.61,9.89,-0.95,0.08,2.59,1.06,0,">1 nonsynonymous","P7I F160L",2
"lib2","SARS-CoV-2","TCACCAGCCAAGAAGA",16,204.44,8.28,-2.55,0.12,1.88,1.06,0.01,">1 nonsynonymous","G83L Y119F R136A",3
"lib2","SARS-CoV-2","TCACCAGCTCAAGACG",5,0.05,NA,NA,NA,NA,NA,NA,"stop","P54M D98T G174*",3
"lib2","SARS-CoV-2","TCACCATAAGTCAGTG",1,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57G V77L Q144L C158Y",4
"lib2","SARS-CoV-2","TCACCATCAAGGGTTG",3,22.25,9.4,-1.44,0.43,1.5,1.13,0.06,">1 nonsynonymous","F12A S164L",2
"lib2","SARS-CoV-2","TCACCATCGGATCCTA",7,179.58,10.72,-0.12,0.04,2.93,1.02,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","TCACCCAACTAAACAA",1,91.76,7.38,-3.45,0.31,1.5,1.08,0.03,">1 nonsynonymous","V32A R179T",2
"lib2","SARS-CoV-2","TCACCCACCCTACCAT",11,0.65,NA,NA,NA,NA,NA,NA,"stop","L5K I142*",2
"lib2","SARS-CoV-2","TCACCCACCTAATATC",3,35.58,6,-4.84,2,3,1.13,0,"1 nonsynonymous","L95G",1
"lib2","SARS-CoV-2","TCACCCATGGTATTAC",8,102.87,9.27,-1.56,0.1,1.67,1.09,0,">1 nonsynonymous","L5F P54G K94S",3
"lib2","SARS-CoV-2","TCACCCATTAAATCTT",13,247.31,10.08,-0.75,0.06,2.53,1.05,0,"1 nonsynonymous","W106R",1
"lib2","SARS-CoV-2","TCACCCATTCTACAAG",2,0.2,NA,NA,NA,NA,NA,NA,"stop","F44L T63Y K128* Y159G",4
"lib2","SARS-CoV-2","TCACCCCGGCGTTTAG",11,50.55,10.61,-0.23,0.05,2.91,1.09,0,"1 nonsynonymous","V173G",1
"lib2","SARS-CoV-2","TCACCCGAGCATAAGG",5,14.09,6.07,-4.77,1.56,1.5,1.14,0.04,">1 nonsynonymous","A105L R136S",2
"lib2","SARS-CoV-2","TCACCCGGCTACTAAT",11,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L Y93Q",2
"lib2","SARS-CoV-2","TCACCCGTCCTCCGCT",5,145.38,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N4R S69L D90G F99D Q163G P177L",6
"lib2","SARS-CoV-2","TCACCCTTCCCGACGC",8,44.63,6,-4.84,2,1.61,1.31,0.03,">1 nonsynonymous","C61D F99S Y123E S139A",4
"lib2","SARS-CoV-2","TCACCCTTTGAAACAA",5,116.02,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N4G D34R Q84K G117S R136L N157I",6
"lib2","SARS-CoV-2","TCACCGAACATATACA",5,51.35,9.61,-1.23,0.09,2.12,1.02,0,">1 nonsynonymous","F44C K128A S129I",3
"lib2","SARS-CoV-2","TCACCGAATATTAATT",1,14.76,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","I28R I88D D98V F134G P177L",5
"lib2","SARS-CoV-2","TCACCGAGTACACTCC",6,38.79,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","L5H C31H S36K N107D R124L G166T P197A",7
"lib2","SARS-CoV-2","TCACCGATAGATCTAA",15,254.27,10.57,-0.27,0.03,2.89,1.08,0,">1 nonsynonymous","K26Y K56T",2
"lib2","SARS-CoV-2","TCACCGCATCATGATC",4,49.08,6,-4.84,2,3,1.15,0,">1 nonsynonymous","R25I G101A I142F",3
"lib2","SARS-CoV-2","TCACCGCATCCCACAC",4,22.09,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L60W P82Q T85L G101L D112W",5
"lib2","SARS-CoV-2","TCACCGCGGTCATGCG",4,11.23,NA,NA,NA,NA,NA,NA,"stop","N4Y A14* S29N V37K Y93G W106N K128F",7
"lib2","SARS-CoV-2","TCACCGCTTTAGCCAG",4,58.67,8.48,-2.35,0.11,2.25,1.08,0,">1 nonsynonymous","N24E A105V G174V",3
"lib2","SARS-CoV-2","TCACCGGACCTATTTT",1,3.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8R",1
"lib2","SARS-CoV-2","TCACCGGTAAGTATCA",6,70.41,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V71K I88D D97Y Y119N",4
"lib2","SARS-CoV-2","TCACCGGTTCTGAGAA",3,11.41,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G152V V182H",2
"lib2","SARS-CoV-2","TCACCGTAACCCATAC",10,66.58,10.8,-0.03,0.05,2.97,1.04,0,"1 nonsynonymous","R78S",1
"lib2","SARS-CoV-2","TCACCGTCTCACACTT",1,10.65,10.61,-0.23,0.09,2.95,1.06,0.01,">1 nonsynonymous","C61H I104Y",2
"lib2","SARS-CoV-2","TCACCGTGGTTGACTT",10,148.41,10.75,-0.09,0.04,2.93,1.04,0,"1 nonsynonymous","D59K",1
"lib2","SARS-CoV-2","TCACCTAAAAAATCCG",1,45.69,10.68,-0.15,0.05,2.99,1.01,0,">1 nonsynonymous","G9P V37L",2
"lib2","SARS-CoV-2","TCACCTAAATCAGAGA",2,18.18,6,-4.84,2,3,1.08,0,">1 nonsynonymous","V11P A18I A42V V173N",4
"lib2","SARS-CoV-2","TCACCTAACCTATTCT",13,151.92,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L60A N92G N157K R179L F185N",5
"lib2","SARS-CoV-2","TCACCTACATCTAGCC",3,21.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E N64H L122W F134N F167L",5
"lib2","SARS-CoV-2","TCACCTAGAAATTGTG",1,15.68,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","I28T K94V W106V K114L",4
"lib2","SARS-CoV-2","TCACCTAGTCAATAAC",5,58.91,10.05,-0.78,0.05,2.86,1.06,0,">1 nonsynonymous","C31T K128A",2
"lib2","SARS-CoV-2","TCACCTAGTTAAAAAA",1,83.17,10.82,-0.02,0.03,2.94,1.07,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","TCACCTATCTGATAAC",2,2.18,NA,NA,NA,NA,NA,NA,"stop","N40* D98L N120* E135R",4
"lib2","SARS-CoV-2","TCACCTATGCTAGTAA",2,19.35,9.29,-1.55,0.07,2.86,1.16,0,">1 nonsynonymous","N4D Y119A",2
"lib2","SARS-CoV-2","TCACCTATTGACATTA",9,22.58,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T15M N107T P149Q Y178R",4
"lib2","SARS-CoV-2","TCACCTCAAGAATAAC",9,242.56,10.57,-0.27,0.03,2.94,1.03,0,"1 nonsynonymous","T85L",1
"lib2","SARS-CoV-2","TCACCTCACGTAATAA",6,20.45,9.9,-0.94,0.15,1.71,1.08,0.01,"1 nonsynonymous","W23N",1
"lib2","SARS-CoV-2","TCACCTGTAACTTGCC",5,66.86,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A81N K114P G152P",3
"lib2","SARS-CoV-2","TCACCTTAAGCCTAGA",2,127.07,10.66,-0.17,0.03,2.94,1.07,0,"1 nonsynonymous","I142L",1
"lib2","SARS-CoV-2","TCACCTTAGTAACAAA",10,23.25,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","T3M C49M N157P",3
"lib2","SARS-CoV-2","TCACCTTGTGCAAGTC",3,32.9,10.08,-0.75,0.13,2.27,1.01,0.01,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","TCACCTTTCACACGAC",12,91.66,10.74,-0.09,0.04,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TCACCTTTTAAATTAA",13,77.98,6,-4.84,2,3,1.1,0,">1 nonsynonymous","W23E Y121F S139R Q168I",4
"lib2","SARS-CoV-2","TCACCTTTTGTAACGT",2,16.6,10.44,-0.39,0.17,2.78,1.05,0.01,">1 nonsynonymous","G9V K56Q K132V",3
"lib2","SARS-CoV-2","TCACGAAAACCCAGTT",1,3.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","TCACGAAAGTATTTCA",14,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167L T201P",2
"lib2","SARS-CoV-2","TCACGAAATGTGGATA",2,79.34,9.05,-1.78,0.07,2.86,1.1,0,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","TCACGAACCAAACTGT",4,20.96,10.45,-0.39,0.06,2.88,1.11,0,">1 nonsynonymous","F17Y T201V",2
"lib2","SARS-CoV-2","TCACGAAGATAAACAT",4,8.64,6.02,-4.82,0.81,3,1.09,0.01,">1 nonsynonymous","F99C S113R E141A",3
"lib2","SARS-CoV-2","TCACGAAGCCGAACCA",6,104.6,10.74,-0.1,0.04,2.86,1.06,0,"1 nonsynonymous","L60N",1
"lib2","SARS-CoV-2","TCACGAATTCCATTCA",7,46.53,9.21,-1.63,0.08,1.96,1.02,0,">1 nonsynonymous","F17V L38C",2
"lib2","SARS-CoV-2","TCACGAATTGGACCAA",2,52.93,10.53,-0.31,0.04,2.97,1,0,"1 nonsynonymous","L57W",1
"lib2","SARS-CoV-2","TCACGACAGCCCAACA",9,0.65,NA,NA,NA,NA,NA,NA,"stop","F99N T148* E154Y",3
"lib2","SARS-CoV-2","TCACGACAGTATGGGG",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L D34N V37L R127W F134Q",5
"lib2","SARS-CoV-2","TCACGACATAATTATG",11,12.01,NA,NA,NA,NA,NA,NA,"stop","F44S K56I K128*",3
"lib2","SARS-CoV-2","TCACGACCCACGTAAA",3,72.01,10.33,-0.5,0.06,2.88,1.11,0,">1 nonsynonymous","E10M S41A",2
"lib2","SARS-CoV-2","TCACGACCCCAAACCA",16,177.27,7.76,-3.07,0.1,1.53,1.13,0,">1 nonsynonymous","N30S L60N Y119C F126M S139T",5
"lib2","SARS-CoV-2","TCACGACTTGCTATCC",1,13.53,10.23,-0.6,0.08,2.86,1,0,">1 nonsynonymous","T15S N24S D34N N40L",4
"lib2","SARS-CoV-2","TCACGAGAAATTCACA",1,25.29,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G9P N130S V182K",3
"lib2","SARS-CoV-2","TCACGAGAAGTCGCGT",13,111.24,6,-4.84,2,3,1.21,0,">1 nonsynonymous","C6E L122P E141T K198A",4
"lib2","SARS-CoV-2","TCACGAGACCAGGACC",2,57.29,10.24,-0.59,0.07,2.83,1,0,">1 nonsynonymous","Q84D L188S",2
"lib2","SARS-CoV-2","TCACGAGCCCAAAACA",1,5.82,7.63,-3.21,0.43,1.5,1,0.03,">1 nonsynonymous","A105L K114N",2
"lib2","SARS-CoV-2","TCACGAGCCCCGCGCG",12,10.04,NA,NA,NA,NA,NA,NA,"stop","Y119* G166C P177S",3
"lib2","SARS-CoV-2","TCACGAGTCTCATCCC",2,26.57,10.81,-0.03,0.05,2.97,1.05,0,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","TCACGAGTGAGACCTT",1,13.14,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","S45L N64T P82S D97E S129F",5
"lib2","SARS-CoV-2","TCACGATGACGCTTAA",1,17.15,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","G9M A81C D137H",3
"lib2","SARS-CoV-2","TCACGATGGGACTAGC",11,34.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F T148V",2
"lib2","SARS-CoV-2","TCACGATTAAATCCGG",3,7.18,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","S19W P149L G196R",3
"lib2","SARS-CoV-2","TCACGCAAAACAGTTG",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A14L A33S Y50H R124P",5
"lib2","SARS-CoV-2","TCACGCAATTCAAAGG",2,20.17,6,-4.84,0.58,3,1.06,0.01,">1 nonsynonymous","R16L N58I F99C N120E",4
"lib2","SARS-CoV-2","TCACGCCAAACTTTTA",7,117.49,6.42,-4.42,0.31,1.5,1.15,0.01,">1 nonsynonymous","V32K C49W S129G N171R",4
"lib2","SARS-CoV-2","TCACGCCACATAGATC",9,117.51,9.72,-1.11,0.08,2.26,1.04,0,">1 nonsynonymous","C6I A33S N58I",3
"lib2","SARS-CoV-2","TCACGCCAGTTAGAAG",5,11.34,6,-4.84,0.96,1.5,1.2,0.02,">1 nonsynonymous","I2A T15G Y39M G83H P96V",5
"lib2","SARS-CoV-2","TCACGCCCATAACTAG",7,0.9,NA,NA,NA,NA,NA,NA,"stop","S184*",1
"lib2","SARS-CoV-2","TCACGCCCATTACCCA",4,9.13,NA,NA,NA,NA,NA,NA,"stop","I2* L95S",2
"lib2","SARS-CoV-2","TCACGCCTTAAACTTC",3,22.85,10.81,-0.03,0.05,2.99,1.02,0,">1 nonsynonymous","G9D C61L",2
"lib2","SARS-CoV-2","TCACGCGCGAGAAGAT",2,0,NA,NA,NA,NA,NA,NA,"stop","I28R N58* Q84H R127H",4
"lib2","SARS-CoV-2","TCACGCGGTATCGATG",9,161.1,10.85,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACGCGTAGTCTGTC",11,365.86,9.86,-0.97,0.03,2.09,1.05,0,">1 nonsynonymous","I2F E76K",2
"lib2","SARS-CoV-2","TCACGCTCCTTCATAG",4,56.95,10.55,-0.29,0.06,2.82,1.18,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","TCACGCTGATATTTAA",1,0.27,NA,NA,NA,NA,NA,NA,"stop","C61T Y119* F160W",3
"lib2","SARS-CoV-2","TCACGGAACCACCAAG",8,114.62,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","TCACGGATTAAAGCTA",8,120.26,10.23,-0.61,0.04,2.97,1.05,0,"1 nonsynonymous","T170A",1
"lib2","SARS-CoV-2","TCACGGCGTATTGCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T I104E T148R",3
"lib2","SARS-CoV-2","TCACGGCTGAAAGCGC",3,107.69,9.89,-0.94,0.07,2.35,1.05,0,">1 nonsynonymous","R78W T100D K199L",3
"lib2","SARS-CoV-2","TCACGGCTTTAAACCC",1,28,9.08,-1.76,0.1,2.84,1.16,0,">1 nonsynonymous","A145C F160E",2
"lib2","SARS-CoV-2","TCACGGGCCTAATTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y50* Y93T F99* V153N",4
"lib2","SARS-CoV-2","TCACGGGGACAGCTTA",2,13.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","S19R F99G G152L",3
"lib2","SARS-CoV-2","TCACGGGGTAAACTGG",12,214.02,10.79,-0.05,0.04,3,1.03,0,">1 nonsynonymous","S53E G196W",2
"lib2","SARS-CoV-2","TCACGGTAACAACCAC",2,10.5,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T85Y L95H",2
"lib2","SARS-CoV-2","TCACGGTACTTACTGA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4S Q79W F99D R136T",4
"lib2","SARS-CoV-2","TCACGGTTTCGTTTCC",1,21.49,10.5,-0.34,0.05,2.9,1.09,0,">1 nonsynonymous","E10S V32W",2
"lib2","SARS-CoV-2","TCACGTAACTTTTTTG",2,37.76,10.83,-0.01,0.05,2.86,1.15,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","TCACGTAAGGAAAATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6R Y123F",2
"lib2","SARS-CoV-2","TCACGTACGCATCTCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55G P149L G174V",3
"lib2","SARS-CoV-2","TCACGTATGAACGGCA",11,213.43,10.35,-0.48,0.05,2.75,1.06,0,">1 nonsynonymous","Q84L N151A",2
"lib2","SARS-CoV-2","TCACGTCAAGGATACC",1,11.94,9.04,-1.79,0.18,1.5,1.06,0.02,">1 nonsynonymous","G86R P197H",2
"lib2","SARS-CoV-2","TCACGTCCCCAACAGT",4,45.38,6.41,-4.43,0.67,1.5,1.24,0.03,">1 nonsynonymous","Y91S Y121S",2
"lib2","SARS-CoV-2","TCACGTGAGTGCTTAA",12,302.37,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C61H N92Q P177A",3
"lib2","SARS-CoV-2","TCACGTGTGATTGAGA",16,174.3,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A67N L122T T170Y",3
"lib2","SARS-CoV-2","TCACGTTAGGTCTATT",1,7.53,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","R25I N40K S129M",3
"lib2","SARS-CoV-2","TCACGTTATTTACCTT",12,108.28,10.8,-0.03,0.06,2.95,1.06,0,"1 nonsynonymous","S43D",1
"lib2","SARS-CoV-2","TCACGTTCAAACAATA",8,38.71,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","P161L",1
"lib2","SARS-CoV-2","TCACGTTCACCACGTA",9,147.02,9.76,-1.07,0.05,2.63,1.08,0,">1 nonsynonymous","D90Y G116R",2
"lib2","SARS-CoV-2","TCACTAAAACAAGAGA",2,20.35,6.72,-4.12,0.2,1.5,1.06,0.01,">1 nonsynonymous","N107P E141S G146C A190S",4
"lib2","SARS-CoV-2","TCACTAAAACTACTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","T3C D34V D112*",3
"lib2","SARS-CoV-2","TCACTAAACACCTCAT",1,5.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","TCACTAAAGCTATAAG",1,11.82,9.22,-1.61,0.1,3,1.06,0.01,">1 nonsynonymous","Y119E T140F",2
"lib2","SARS-CoV-2","TCACTAACCTACCGTG",5,114.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44E F70L P82A A105Y",4
"lib2","SARS-CoV-2","TCACTAAGATGTAATA",13,178.67,10.87,0.04,0.04,2.94,1.07,0,">1 nonsynonymous","Y66M P197A",2
"lib2","SARS-CoV-2","TCACTAAGTGTTTCAC",3,77.63,10.74,-0.1,0.04,2.91,1.1,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","TCACTAATATGGGGTA",5,16.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13G D68K N120S T201Q",4
"lib2","SARS-CoV-2","TCACTAATGACGGACT",1,27.45,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N107I G152P",2
"lib2","SARS-CoV-2","TCACTAATTGTCACAG",6,7.44,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D75A K94I N110L T140R E186Y T201M",6
"lib2","SARS-CoV-2","TCACTACATTCCACAA",8,235.58,10.28,-0.55,0.04,2.93,1.08,0,"1 nonsynonymous","G174T",1
"lib2","SARS-CoV-2","TCACTACCAAAAACAC",1,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20L K87R K128E G146L",4
"lib2","SARS-CoV-2","TCACTACCAGGCGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L57* K94F T148V",3
"lib2","SARS-CoV-2","TCACTACCCATCAGGT",4,38.55,7.56,-3.27,0.15,1.66,1.14,0.01,">1 nonsynonymous","T85R S108K T140K",3
"lib2","SARS-CoV-2","TCACTACCCTTGATTC",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37C Y50C A89P Y121L C158E",5
"lib2","SARS-CoV-2","TCACTACCGCTACTGG",12,80.62,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","K87I Y123G P149G L162E",4
"lib2","SARS-CoV-2","TCACTAGAAAAAAACG",10,26.57,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","N64P G86R V103K",3
"lib2","SARS-CoV-2","TCACTAGATATGTAAT",4,21.99,10.03,-0.8,0.07,2.85,1,0,">1 nonsynonymous","T3N L122R N151T G155Y",4
"lib2","SARS-CoV-2","TCACTAGATTAACACG",9,185.45,10.84,0.01,0.06,2.93,1.08,0,"1 nonsynonymous","K198S",1
"lib2","SARS-CoV-2","TCACTAGCAATATATA",4,10.9,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","TCACTAGCACGGCCAT",6,49.7,6.17,-4.67,1.28,1.5,1.23,0.04,">1 nonsynonymous","G51H P149R Y165K",3
"lib2","SARS-CoV-2","TCACTAGGTTACTTAT",1,8.4,9.32,-1.52,0.15,3,1.05,0,">1 nonsynonymous","N40S Y119T",2
"lib2","SARS-CoV-2","TCACTAGTCAAAAGAT",2,13.51,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G74Y P96T T201W",3
"lib2","SARS-CoV-2","TCACTATAAAACTAGT",4,37.62,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","TCACTATATGAATATA",2,39.78,8.53,-2.3,0.27,1.5,1,0.03,">1 nonsynonymous","P96L N120M",2
"lib2","SARS-CoV-2","TCACTATATTGGACGC",4,8.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T63N I88H F99L",3
"lib2","SARS-CoV-2","TCACTATCATGACCGA",6,0.66,NA,NA,NA,NA,NA,NA,"stop","V32A T63*",2
"lib2","SARS-CoV-2","TCACTATCCACTCAGT",8,23.08,6,-4.84,2,3,1.14,0,">1 nonsynonymous","T63L G83S A105K T140Y",4
"lib2","SARS-CoV-2","TCACTATCCATAGATG",23,6.95,NA,NA,NA,NA,NA,NA,"stop","V11F C31P F44L C49H K199*",5
"lib2","SARS-CoV-2","TCACTATCCTCATCAA",1,20.76,10.77,-0.06,0.05,2.89,1.13,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","TCACTATGCCCCGAAT",8,82.46,8.92,-1.92,0.09,2.46,1.14,0,">1 nonsynonymous","K87Y W106F Y175H S184K",4
"lib2","SARS-CoV-2","TCACTATTTGCGACAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","F12W L60* S200*",3
"lib2","SARS-CoV-2","TCACTCAAAAAGAAAT",6,21.88,6.59,-4.25,0.88,1.5,1.12,0.07,">1 nonsynonymous","S43L S113E E141F",3
"lib2","SARS-CoV-2","TCACTCAGCGCACTGT",3,23.06,10.84,0,0.05,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TCACTCATGCACACCC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* Q168H",2
"lib2","SARS-CoV-2","TCACTCATGGAGCACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91T E154M",2
"lib2","SARS-CoV-2","TCACTCCAAACAATTA",9,99.78,10.8,-0.04,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTCCCAGAATATC",4,198.81,9.84,-1,0.05,2.84,1.08,0,">1 nonsynonymous","N120T N130T",2
"lib2","SARS-CoV-2","TCACTCCCCCGATCCA",5,152.58,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16G P177K",2
"lib2","SARS-CoV-2","TCACTCCTTTTACTAA",1,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L C61D I72T T85S C102S N120S N157G V173L A192S",9
"lib2","SARS-CoV-2","TCACTCGCATGCAACA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCACTCTACACCATGA",12,68.95,6.11,-4.73,0.82,1.5,1.17,0.02,">1 nonsynonymous","C6T R73T N120M P149G",4
"lib2","SARS-CoV-2","TCACTCTCACTATTTG",1,37.11,10.77,-0.07,0.11,2.78,1.24,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCACTCTCTAAAAATG",2,20.1,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","F167E",1
"lib2","SARS-CoV-2","TCACTCTGACATATCA",3,58.27,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F44L K132R C158M F167S",4
"lib2","SARS-CoV-2","TCACTCTTGAGAGCAA",7,42,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","W23L F62P N130V",3
"lib2","SARS-CoV-2","TCACTGAAAAAATCGG",7,58.57,9.15,-1.69,0.08,2.85,1.09,0,">1 nonsynonymous","S41Y Y119D",2
"lib2","SARS-CoV-2","TCACTGAACAAGAAAA",5,98.33,10.86,0.02,0.03,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTGACCTATACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R L95M V103G",3
"lib2","SARS-CoV-2","TCACTGACTCCTACGC",1,0,NA,NA,NA,NA,NA,NA,"stop","E10H Y143* E154V",3
"lib2","SARS-CoV-2","TCACTGATCATGACCC",5,78.43,10.84,0.01,0.04,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTGCCCATACAAC",8,2.76,NA,NA,NA,NA,NA,NA,"stop","F70E K94* I142L",3
"lib2","SARS-CoV-2","TCACTGCGACCGTTCC",5,122.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","E10L C150Y N157W",3
"lib2","SARS-CoV-2","TCACTGCGATAGTGAG",3,41.63,10.49,-0.35,0.06,2.86,1.03,0,">1 nonsynonymous","Y39H K128I V173R",3
"lib2","SARS-CoV-2","TCACTGCGGCGAACCG",12,268.08,9.98,-0.85,0.04,2.93,1.04,0,">1 nonsynonymous","V65A T140S F156M",3
"lib2","SARS-CoV-2","TCACTGCGTTTTCCGG",4,36.66,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y50F G83C N107M R179F",4
"lib2","SARS-CoV-2","TCACTGCTAAGTAGAA",3,54.63,6,-4.84,1.86,1.5,1.21,0.01,">1 nonsynonymous","Y91I W106M Y119S",3
"lib2","SARS-CoV-2","TCACTGGAGATAATCA",4,45.06,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S19T F62L S69Y Y175C",4
"lib2","SARS-CoV-2","TCACTGGATATAATGT",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","TCACTGGATCAATGTT",4,0.53,NA,NA,NA,NA,NA,NA,"stop","V11M R16*",2
"lib2","SARS-CoV-2","TCACTGGCGCTTACAA",1,18.34,8.47,-2.37,0.13,2.97,1.04,0.01,"1 nonsynonymous","T170I",1
"lib2","SARS-CoV-2","TCACTGGCGTCAATAC",6,98.88,10.9,0.06,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTGGGCAACCACG",3,6.88,10.01,-0.83,0.14,2.36,1.03,0.01,">1 nonsynonymous","L38D P54L",2
"lib2","SARS-CoV-2","TCACTGGTCTACATAC",4,34.86,9.76,-1.08,0.08,2.15,1,0,">1 nonsynonymous","F62V N151K F185R",3
"lib2","SARS-CoV-2","TCACTGGTGTAATAAA",1,7.3,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S53R P96I F160V",3
"lib2","SARS-CoV-2","TCACTGTCGAACTACC",3,27.2,10.61,-0.23,0.05,3,1,0,">1 nonsynonymous","D97K K114D",2
"lib2","SARS-CoV-2","TCACTGTTAAACTTCA",5,76.38,10.86,0.02,0.06,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTGTTTCGAAGAA",10,62.5,6,-4.84,1.09,1.5,1.09,0,">1 nonsynonymous","R25V A67D C102L",3
"lib2","SARS-CoV-2","TCACTTAACCTACAAA",6,134.05,10.85,0.02,0.08,2.74,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTTAAGAATCGAA",1,6.03,6.03,-4.81,2,1.5,1.16,0.03,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","TCACTTAAGCTCAGAT",11,42.69,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F167M G174V",2
"lib2","SARS-CoV-2","TCACTTAATCTATACA",4,51.14,9.86,-0.98,0.11,2.23,1.07,0.01,">1 nonsynonymous","G9Q R136E",2
"lib2","SARS-CoV-2","TCACTTACAGGGCCAA",6,28.9,9.98,-0.85,0.09,2.66,1.06,0,">1 nonsynonymous","S41F L122G Q144T F160D",4
"lib2","SARS-CoV-2","TCACTTACATGGGCGC",6,83.12,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K87R R127I G146V L188N",4
"lib2","SARS-CoV-2","TCACTTACTGAAGTGG",6,77.87,9.59,-1.25,0.1,2.35,1.05,0,">1 nonsynonymous","F44L G155V",2
"lib2","SARS-CoV-2","TCACTTAGGTGAATAA",9,112.11,10.82,-0.02,0.03,2.97,1.03,0,">1 nonsynonymous","T55A K128R",2
"lib2","SARS-CoV-2","TCACTTAGTATTTTGA",1,117.27,10.86,0.02,0.05,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TCACTTATCTAAAAGA",1,6.44,9.67,-1.17,0.13,2.08,1,0.01,">1 nonsynonymous","F99V E154A",2
"lib2","SARS-CoV-2","TCACTTATGAAAAGGT",5,19.3,10.81,-0.03,0.09,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTTATTAATAGCT",1,6.71,6,-4.84,2,3,1.17,0.06,">1 nonsynonymous","C6A R127D I142R",3
"lib2","SARS-CoV-2","TCACTTATTGAAACCT",6,100.44,7.91,-2.93,0.11,2.16,1.15,0,">1 nonsynonymous","N157L T170A",2
"lib2","SARS-CoV-2","TCACTTCAAGCAAGAC",9,73.87,6,-4.84,1.81,3,1.07,0,">1 nonsynonymous","Y50S F99C S113I T170S",4
"lib2","SARS-CoV-2","TCACTTCAGACTGGAT",11,125.88,10.68,-0.16,0.04,2.85,1.1,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","TCACTTCATACTAGTC",1,42.46,10.66,-0.18,0.07,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTTCTAATACCAT",1,20.51,11.02,0.18,0.1,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCACTTGACCCCCTAA",9,0.29,NA,NA,NA,NA,NA,NA,"stop","T15M Y93V L122* P149T",4
"lib2","SARS-CoV-2","TCACTTGCAAATTCTA",2,32.97,10.81,-0.03,0.06,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TCACTTGCATATTATA",6,119.74,10.73,-0.1,0.04,2.98,1.02,0,">1 nonsynonymous","V37Y N130F",2
"lib2","SARS-CoV-2","TCACTTGGGCTAGGCT",4,27.58,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A14V W23S C61N G146S",4
"lib2","SARS-CoV-2","TCACTTGTGTGATGTG",3,39.67,8.25,-2.58,0.15,2.31,1.02,0.01,">1 nonsynonymous","Y119A I142N",2
"lib2","SARS-CoV-2","TCACTTGTTAGGCATG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P A33W N64L I88M L111R",5
"lib2","SARS-CoV-2","TCACTTTACAACAGTT",10,85.34,8.32,-2.52,0.13,2.08,1.1,0.01,">1 nonsynonymous","A18F N157K",2
"lib2","SARS-CoV-2","TCACTTTGATTGCAAG",1,11.71,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D59E G83V Y93R T100A N157L",5
"lib2","SARS-CoV-2","TCACTTTGCCCCACCC",4,47.63,9.21,-1.63,0.13,1.96,1.07,0.01,">1 nonsynonymous","C6R S139E E154T",3
"lib2","SARS-CoV-2","TCACTTTTAACCTTTT",3,52.48,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","I88L Y93L E154N",3
"lib2","SARS-CoV-2","TCAGAAAAACTTAACA",4,156.03,6.99,-3.85,0.17,1.5,1.12,0.01,">1 nonsynonymous","P54G Y175T",2
"lib2","SARS-CoV-2","TCAGAAAACGGGACGG",14,321.68,10.06,-0.77,0.05,2.51,1.05,0,"1 nonsynonymous","G51C",1
"lib2","SARS-CoV-2","TCAGAAAAGCCATTGA",6,57.62,9.34,-1.5,0.09,2.85,1.16,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","TCAGAAAATTTTAGTG",1,19.31,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N110L F167I",2
"lib2","SARS-CoV-2","TCAGAAAGCTTAACAA",1,13.04,10.66,-0.18,0.08,3,1.02,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","TCAGAAAGGAAGCTAA",5,37.9,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T63S V103Y P133G P149S P169S",5
"lib2","SARS-CoV-2","TCAGAAAGGGCGTATC",5,146.16,9.55,-1.29,0.09,2.28,1.12,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TCAGAAAGTATTTACG",4,33.14,10.86,0.03,0.12,2.9,1.02,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TCAGAAAGTGTAACCC",4,62.65,10.79,-0.05,0.08,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGAAATAAAAGATG",6,31.39,6.58,-4.25,0.41,1.5,1.04,0.02,">1 nonsynonymous","P54D N107F V173T V180H",4
"lib2","SARS-CoV-2","TCAGAAATAGACATTG",2,45.34,9.97,-0.86,0.12,2.41,1.06,0.01,">1 nonsynonymous","S41G A89V",2
"lib2","SARS-CoV-2","TCAGAACAATTGTTCT",3,62.81,10.86,0.02,0.08,2.95,1.04,0,">1 nonsynonymous","V37T N120H",2
"lib2","SARS-CoV-2","TCAGAACCAAAACTAC",3,46.57,10.38,-0.46,0.04,2.81,1.11,0,">1 nonsynonymous","T100I N120Q R136V",3
"lib2","SARS-CoV-2","TCAGAACCGGGAGGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H W106C D137Y V182A",4
"lib2","SARS-CoV-2","TCAGAACCTTAAGGCA",3,19.79,6,-4.84,2,3,1.18,0.03,">1 nonsynonymous","R16V K94T",2
"lib2","SARS-CoV-2","TCAGAACTAACCTCAC",2,13.64,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R16L L95R N107C",3
"lib2","SARS-CoV-2","TCAGAACTAGGACAAC",4,15.32,7.03,-3.8,0.48,1.5,1.15,0.05,">1 nonsynonymous","A42D P54T S69L K128F E141N",5
"lib2","SARS-CoV-2","TCAGAAGAACTCTATA",2,65.06,9.67,-1.17,0.07,2.08,1.06,0,">1 nonsynonymous","N30V K114L",2
"lib2","SARS-CoV-2","TCAGAAGAGGAACTCG",1,5.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L A42L N107L P169L",4
"lib2","SARS-CoV-2","TCAGAAGCATCATTAT",7,15.93,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","L5N K26S L95M Y165V G172Y",5
"lib2","SARS-CoV-2","TCAGAAGCCAAATTTA",2,1.43,NA,NA,NA,NA,NA,NA,"stop","R16L N30* T170V T201Y",4
"lib2","SARS-CoV-2","TCAGAAGCGAACCAAA",3,51.5,10.83,-0.01,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGAAGGCTAGCTCA",13,109.03,6.04,-4.79,0.57,1.5,1.13,0.01,">1 nonsynonymous","N151S G174Q R179S",3
"lib2","SARS-CoV-2","TCAGAAGGGAGAAACG",5,197.78,10.84,0,0.05,2.9,1.11,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","TCAGAAGGTTTCTACG",10,43.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52H G83S D97C S129D S139T T170S",6
"lib2","SARS-CoV-2","TCAGAAGTATTCCACT",8,31.66,6,-4.84,1.58,1.5,1.16,0.01,">1 nonsynonymous","F99C A105R",2
"lib2","SARS-CoV-2","TCAGAAGTCTGAAGCG",4,1.7,NA,NA,NA,NA,NA,NA,"stop","A105* S113R Y121V N171S E186V T201I",6
"lib2","SARS-CoV-2","TCAGAAGTGGCATATT",1,18.93,10.76,-0.08,0.06,2.9,1.12,0,"1 nonsynonymous","S164Y",1
"lib2","SARS-CoV-2","TCAGAATACACCTTTT",3,19.33,10.52,-0.32,0.06,2.89,1.11,0,"1 nonsynonymous","A145T",1
"lib2","SARS-CoV-2","TCAGAATACTAATCGA",2,3.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I T148K Y165A",3
"lib2","SARS-CoV-2","TCAGAATAGAGTCTTC",7,175.44,7.65,-3.19,0.19,1.5,1.17,0.01,">1 nonsynonymous","W23E P149S",2
"lib2","SARS-CoV-2","TCAGAATCAAAGCAAT",2,10.36,6.72,-4.11,0.67,1.5,1.29,0.08,">1 nonsynonymous","G9L G116S T140Q E154S P161S",5
"lib2","SARS-CoV-2","TCAGAATCACCCTAAC",1,1.13,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCAGAATCGAACCAAG",5,47.9,10.8,-0.04,0.07,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGAATCGATTTCGA",9,78.67,8.41,-2.43,0.1,2.76,1.04,0,"1 nonsynonymous","Y159A",1
"lib2","SARS-CoV-2","TCAGAATCTATAAAAT",3,7.24,6,-4.84,0.79,3,1.01,0.01,">1 nonsynonymous","W23T P96M",2
"lib2","SARS-CoV-2","TCAGAATGAGTCCCAC",10,231.52,10.68,-0.16,0.03,2.9,1.08,0,">1 nonsynonymous","F8Y D97N",2
"lib2","SARS-CoV-2","TCAGAATTAACAGGTA",1,60.26,10.72,-0.12,0.05,2.93,1,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","TCAGAATTCATACTTT",9,39.07,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","F12I V103K Y119L A145E",4
"lib2","SARS-CoV-2","TCAGAATTCCGTTAGG",2,0.27,NA,NA,NA,NA,NA,NA,"stop","A42N N92S I142*",3
"lib2","SARS-CoV-2","TCAGAATTGTAGAACT",3,0.11,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","TCAGAATTGTCACGAG",1,16.21,9.63,-1.21,0.21,1.58,1.02,0.02,">1 nonsynonymous","S36K P82L",2
"lib2","SARS-CoV-2","TCAGACAACTGCCAGT",10,164.85,10.72,-0.12,0.04,2.85,1.08,0,"1 nonsynonymous","G9T",1
"lib2","SARS-CoV-2","TCAGACAATGATGAAT",1,31.14,10.64,-0.2,0.07,3,1,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","TCAGACAATGTTCTAC",9,91.01,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2A G9V F17D Y119V R136W F156L",6
"lib2","SARS-CoV-2","TCAGACACATGTATAA",5,116.78,10.31,-0.53,0.04,2.87,1.05,0,">1 nonsynonymous","F12L K56L",2
"lib2","SARS-CoV-2","TCAGACAGGTATTCCA",2,11.04,6.59,-4.25,0.64,1.5,1.08,0.05,">1 nonsynonymous","S19V A89N G152Y",3
"lib2","SARS-CoV-2","TCAGACATGAGCTAGG",10,68.3,10.84,0,0.03,2.92,1.08,0,">1 nonsynonymous","N120A K128P T201Y",3
"lib2","SARS-CoV-2","TCAGACATGTAAAAAA",6,7.94,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","N4F T85P S113I T201G",4
"lib2","SARS-CoV-2","TCAGACCAACTAGATC",7,124.61,10.8,-0.04,0.04,2.9,1.12,0,"1 nonsynonymous","K198C",1
"lib2","SARS-CoV-2","TCAGACCAGCCGCTAC",8,13.01,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2D A14S C49Q D137K",4
"lib2","SARS-CoV-2","TCAGACCATCATGATC",1,0,NA,NA,NA,NA,NA,NA,"stop","C6I S41A C61K D68* D75I",5
"lib2","SARS-CoV-2","TCAGACCATGGAAAGG",2,79.31,8.42,-2.41,0.09,2.77,1.06,0,"1 nonsynonymous","S113F",1
"lib2","SARS-CoV-2","TCAGACCTGTAATCGA",6,118.12,8.18,-2.66,0.14,2.07,1.08,0.01,">1 nonsynonymous","D34K T170V",2
"lib2","SARS-CoV-2","TCAGACGATGTCCACG",1,7.1,6.2,-4.64,0.19,3,1.07,0,">1 nonsynonymous","S43D K128R N157P",3
"lib2","SARS-CoV-2","TCAGACGGACTGCTCC",1,1.97,NA,NA,NA,NA,NA,NA,"stop","Y39* V115S P149R R179S",4
"lib2","SARS-CoV-2","TCAGACGTAAACATGA",5,21.24,6.17,-4.66,1.37,1.5,1.31,0.07,">1 nonsynonymous","G9Y G101Y",2
"lib2","SARS-CoV-2","TCAGACTAAAAGATAT",11,115.9,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2S G152S Y159D F167K",4
"lib2","SARS-CoV-2","TCAGACTCAGGAGGAT",12,14.26,NA,NA,NA,NA,NA,NA,"stop","L57* D112T",2
"lib2","SARS-CoV-2","TCAGACTGGTTGTGAG",10,146.2,10.66,-0.17,0.03,2.95,1.06,0,">1 nonsynonymous","C61A K128V",2
"lib2","SARS-CoV-2","TCAGACTTATACAGAT",1,17.23,10.42,-0.41,0.06,2.94,1.05,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","TCAGACTTTTTACCAT",11,185.91,8.62,-2.21,0.08,2.38,1.07,0,">1 nonsynonymous","K56F Y119K V180I",3
"lib2","SARS-CoV-2","TCAGAGAAGGGCACAT",15,307.38,10.8,-0.03,0.04,2.93,1.09,0,">1 nonsynonymous","T100L K132H I138L",3
"lib2","SARS-CoV-2","TCAGAGAATCAGACGG",3,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99S N118R",2
"lib2","SARS-CoV-2","TCAGAGAATCATCACT",1,14.76,10.82,-0.02,0.09,2.91,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGAGACGCCCATAT",23,38.78,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","C6S A105T N130L V182E",4
"lib2","SARS-CoV-2","TCAGAGAGAATTACAT",22,3.64,NA,NA,NA,NA,NA,NA,"stop","A14E A89S F167* N171R T201R",5
"lib2","SARS-CoV-2","TCAGAGATCAAGGGAA",3,20.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C F62R P96Y V103G",4
"lib2","SARS-CoV-2","TCAGAGCAGAGATGCC",4,41.08,10.22,-0.62,0.07,2.79,1,0,">1 nonsynonymous","L60R I138W",2
"lib2","SARS-CoV-2","TCAGAGGATGCAGAAA",4,31.45,10.33,-0.5,0.06,2.83,1.11,0,">1 nonsynonymous","L5D A42S C61V D98L",4
"lib2","SARS-CoV-2","TCAGAGGGCTAGTCGC",1,9.37,7.36,-3.48,0.29,1.5,1.08,0.05,">1 nonsynonymous","C158G L187F",2
"lib2","SARS-CoV-2","TCAGAGTACCACAACA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","F8R R16L R25V L95* V103C G152S",6
"lib2","SARS-CoV-2","TCAGAGTCTGTGTTAC",3,53.6,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D98G F126P G152K",3
"lib2","SARS-CoV-2","TCAGATAAGCTGGAAG",1,12.67,8.94,-1.9,0.26,1.5,1.05,0.03,">1 nonsynonymous","P7N P82D",2
"lib2","SARS-CoV-2","TCAGATAATTCCGTAA",5,34.79,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F12R K87V P133L R179P T201L",5
"lib2","SARS-CoV-2","TCAGATACATACCTCA",1,17.15,10.26,-0.58,0.14,2.72,1.03,0.01,">1 nonsynonymous","V71I S139A",2
"lib2","SARS-CoV-2","TCAGATAGAAATCGTA",12,107.87,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","G101T Q168R Y175F",3
"lib2","SARS-CoV-2","TCAGATAGTAGCTGTT",2,20.19,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F62L P177R",2
"lib2","SARS-CoV-2","TCAGATAGTATAGACA",5,180.28,10.8,-0.04,0.04,2.92,1.08,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","TCAGATATATTGGTCG",7,0.15,NA,NA,NA,NA,NA,NA,"stop","E10T F99*",2
"lib2","SARS-CoV-2","TCAGATATGATTAAGC",5,43,10.88,0.05,0.07,2.94,1.08,0,">1 nonsynonymous","Y39V L188P",2
"lib2","SARS-CoV-2","TCAGATCAATTTCATG",4,31.2,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V103R D112C A190K",3
"lib2","SARS-CoV-2","TCAGATCCCTGGCCTG",5,20.48,6.05,-4.79,2,1.5,1.19,0.07,">1 nonsynonymous","S45N D90P",2
"lib2","SARS-CoV-2","TCAGATCGGTCTATAG",1,42.73,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","R16S S36L Y66H F126S G146P F156I",6
"lib2","SARS-CoV-2","TCAGATCGTGCATGAA",10,66.89,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G9E V37G F134V G152P P161A",5
"lib2","SARS-CoV-2","TCAGATCTGTGAAGGG",3,134.63,10.09,-0.75,0.05,2.81,1.04,0,">1 nonsynonymous","S45N N64R T148C",3
"lib2","SARS-CoV-2","TCAGATGCATACATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7L W23* F47H F70E",4
"lib2","SARS-CoV-2","TCAGATGTTGACAAAT",2,19.56,8.35,-2.48,0.36,1.5,1,0.05,">1 nonsynonymous","T15M T46P S184I",3
"lib2","SARS-CoV-2","TCAGATGTTTGCAAAC",12,76.22,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C49L Y119L Q144W G174T R179S",5
"lib2","SARS-CoV-2","TCAGATGTTTTGCTGA",5,71.38,9.25,-1.59,0.13,1.76,1.08,0.01,">1 nonsynonymous","Y50S P149A",2
"lib2","SARS-CoV-2","TCAGATTACCATTTAC",2,12.53,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TCAGATTGAAAGAGTA",18,87.61,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4I Y50H C61H D137Y",4
"lib2","SARS-CoV-2","TCAGATTGCGCGCTTA",1,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19W V103Q G116A F126A L162T T170F",6
"lib2","SARS-CoV-2","TCAGATTTAATATTCG",2,9.61,9.65,-1.19,0.14,2.87,1.13,0.01,">1 nonsynonymous","I2N G83D S129K G174E",4
"lib2","SARS-CoV-2","TCAGCAAAAGTGCAAA",2,5.96,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R136F G174V H189L",3
"lib2","SARS-CoV-2","TCAGCAACCCTGACCG",3,0.98,NA,NA,NA,NA,NA,NA,"stop","F12* A33P G83* S200L",4
"lib2","SARS-CoV-2","TCAGCAACGACCACAA",10,77.79,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G116C R127T",2
"lib2","SARS-CoV-2","TCAGCAAGAGATTCGC",2,91.93,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","R27N S43C L162N Q176S T201M",5
"lib2","SARS-CoV-2","TCAGCAATCAATGCTT",11,0.21,NA,NA,NA,NA,NA,NA,"stop","F44N T55W Q79L I88* L183V",5
"lib2","SARS-CoV-2","TCAGCAATTGTCTGGA",13,43.46,6,-4.84,2,2.69,1.13,0,">1 nonsynonymous","N1F S45G P54S Y91W P161S",5
"lib2","SARS-CoV-2","TCAGCACAATGCAACA",3,45.88,6.68,-4.15,0.56,1.5,1.19,0.04,">1 nonsynonymous","F44D D90V L122I",3
"lib2","SARS-CoV-2","TCAGCACACCATTACA",5,17.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I S184P",2
"lib2","SARS-CoV-2","TCAGCACAGCTATGTT",3,21.03,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G86V E154D",2
"lib2","SARS-CoV-2","TCAGCAGCCTGTATCA",3,1.67,NA,NA,NA,NA,NA,NA,"stop","F12Y D90* P161Y",3
"lib2","SARS-CoV-2","TCAGCAGGATGAAATC",5,1.38,NA,NA,NA,NA,NA,NA,"stop","F12N L122*",2
"lib2","SARS-CoV-2","TCAGCAGGTGTAGTAC",5,81.02,8.42,-2.42,0.17,1.5,1.13,0.01,">1 nonsynonymous","D137G K199T",2
"lib2","SARS-CoV-2","TCAGCATAAGACCTTG",5,23.16,10.43,-0.4,0.06,2.99,1.06,0,">1 nonsynonymous","G9W K56Y T201A",3
"lib2","SARS-CoV-2","TCAGCATACCATGTAG",3,55.77,8.2,-2.63,0.11,2.56,1.08,0,">1 nonsynonymous","L5D V11L N157M",3
"lib2","SARS-CoV-2","TCAGCATGTAGTAAAC",4,92.49,10.49,-0.35,0.06,2.89,1.03,0,">1 nonsynonymous","Q84S E135S",2
"lib2","SARS-CoV-2","TCAGCATTACTGAACG",1,18.52,8.72,-2.12,0.18,2.19,1,0.02,">1 nonsynonymous","S139Y F160I S184F",3
"lib2","SARS-CoV-2","TCAGCCACATAATGAT",18,184.26,9.41,-1.43,0.09,2.23,1.08,0,">1 nonsynonymous","F44G T85P K114T N120R",4
"lib2","SARS-CoV-2","TCAGCCAGGTAGGTAC",5,25,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","W106D Y123G P133H",3
"lib2","SARS-CoV-2","TCAGCCAGTGAAGTGT",3,45.62,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D112G R127V Q168A",3
"lib2","SARS-CoV-2","TCAGCCATAGTCGAGA",7,45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K94L I104L Y119M",3
"lib2","SARS-CoV-2","TCAGCCATCCCTGTCC",5,83.6,10.19,-0.65,0.05,2.81,1,0,">1 nonsynonymous","W106M K128S",2
"lib2","SARS-CoV-2","TCAGCCATGTTGTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q T201P",2
"lib2","SARS-CoV-2","TCAGCCCAAAAAATGT",1,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F T15I Y91L E154D",4
"lib2","SARS-CoV-2","TCAGCCCACAGACCTA",2,52.65,10.69,-0.15,0.06,2.91,1.1,0,">1 nonsynonymous","D59Y D97L",2
"lib2","SARS-CoV-2","TCAGCCCGAAACATAA",2,59.14,8.36,-2.47,0.2,1.57,1.06,0.02,">1 nonsynonymous","D112N K198R",2
"lib2","SARS-CoV-2","TCAGCCCGACGAACAC",3,2.53,NA,NA,NA,NA,NA,NA,"stop","C31K F99* Y121R",3
"lib2","SARS-CoV-2","TCAGCCCTACCACAAG",4,33.24,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F99T S129I T148L G155S",4
"lib2","SARS-CoV-2","TCAGCCCTCTTACCAT",1,32.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G101D G146L",2
"lib2","SARS-CoV-2","TCAGCCGACCTCGCAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66F N92F Y175M",3
"lib2","SARS-CoV-2","TCAGCCGATACAATAC",10,130.12,10.92,0.09,0.04,2.92,1.09,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","TCAGCCGCACTCAGGA",8,60.59,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F167V H189Y",2
"lib2","SARS-CoV-2","TCAGCCGTACTGTATA",1,8.84,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3C C158D S164Y",3
"lib2","SARS-CoV-2","TCAGCCGTAGCCGCCT",2,0.25,NA,NA,NA,NA,NA,NA,"stop","R27Q T55G T85S Y123*",4
"lib2","SARS-CoV-2","TCAGCCGTGAACCACA",12,32.8,6.28,-4.56,0.75,1.5,1.16,0.03,">1 nonsynonymous","A18T D34L D90S N109E T140I",5
"lib2","SARS-CoV-2","TCAGCCGTTGCACCCT",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T N24L A33P S41Q P54Y D68V",6
"lib2","SARS-CoV-2","TCAGCCTAAAGAATCC",6,52,10.61,-0.22,0.07,2.91,1.04,0,"1 nonsynonymous","A89C",1
"lib2","SARS-CoV-2","TCAGCCTAAGAAAAAA",1,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H T85H V103M L122C",4
"lib2","SARS-CoV-2","TCAGCCTAAGCCTAAG",1,4.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","TCAGCCTACTAGACGT",3,41.84,10.5,-0.33,0.05,2.94,1.07,0,">1 nonsynonymous","P149M F156W S200Y",3
"lib2","SARS-CoV-2","TCAGCCTGATTGAACA",2,15.05,6.24,-4.59,2,1.5,1.18,0.03,">1 nonsynonymous","P7K T15N A18T G101I S113L",5
"lib2","SARS-CoV-2","TCAGCCTGCTAATTCT",1,32.83,8.78,-2.06,0.14,1.66,1.11,0.01,">1 nonsynonymous","V11F T85L D98H I104V",4
"lib2","SARS-CoV-2","TCAGCGAAGCCCCGCG",4,71.87,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S19N G86W L122R",3
"lib2","SARS-CoV-2","TCAGCGACAAATAATC",1,13.72,6,-4.84,2,3,1.03,0,">1 nonsynonymous","K48A D68V G86D D98A Y121L E141S",6
"lib2","SARS-CoV-2","TCAGCGACATCCCCAC",3,44.73,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","R124S Q144F",2
"lib2","SARS-CoV-2","TCAGCGATAGGCTGGC",5,62.65,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12G N157F",2
"lib2","SARS-CoV-2","TCAGCGATGAAGTAAA",4,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L K48N P96T",3
"lib2","SARS-CoV-2","TCAGCGCACACCTGTA",3,15.3,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13S Y93T Y119M T201C",4
"lib2","SARS-CoV-2","TCAGCGCCCATATAAA",8,502.04,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","L38R I80F F99L",3
"lib2","SARS-CoV-2","TCAGCGCCGACGCAAG",4,63.03,10.11,-0.73,0.03,2.96,1.04,0,">1 nonsynonymous","P149R G174W",2
"lib2","SARS-CoV-2","TCAGCGCTAATGACAG",6,75.95,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S29A S45N L60T P82L D90E G101S Y121T T140A",8
"lib2","SARS-CoV-2","TCAGCGCTAGTAATAA",4,12.94,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N40S N64S V77L V103E",4
"lib2","SARS-CoV-2","TCAGCGCTTATGCGCC",1,10.08,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","G83R G101I I142T F160K R179G",5
"lib2","SARS-CoV-2","TCAGCGGACTAACAAA",1,8.28,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","K56Q T63A Y93Q P149F",4
"lib2","SARS-CoV-2","TCAGCGGATGCAAACG",8,54.57,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A14D F62L C158N",3
"lib2","SARS-CoV-2","TCAGCGGGGCGTGACA",12,74.89,10.58,-0.25,0.04,2.85,1.16,0,"1 nonsynonymous","S184R",1
"lib2","SARS-CoV-2","TCAGCGTAATCTATAG",1,40.83,8.24,-2.6,0.2,1.87,1.09,0.01,">1 nonsynonymous","Y39V G51E R73T",3
"lib2","SARS-CoV-2","TCAGCTATGGAATAAC",6,0.56,NA,NA,NA,NA,NA,NA,"stop","N58* S129P",2
"lib2","SARS-CoV-2","TCAGCTATTCGTAATT",3,33.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R27L N58T F99S",3
"lib2","SARS-CoV-2","TCAGCTCAGAAAACCC",1,62.71,10.21,-0.62,0.05,2.79,1.05,0,"1 nonsynonymous","L57S",1
"lib2","SARS-CoV-2","TCAGCTCATAAACCTA",9,1.15,NA,NA,NA,NA,NA,NA,"stop","K56V Q84S N92P R127* A190V",5
"lib2","SARS-CoV-2","TCAGCTCGAGGAAACC",7,104.03,9.41,-1.43,0.08,2.2,1.03,0,">1 nonsynonymous","Y121N G152R",2
"lib2","SARS-CoV-2","TCAGCTCTAATGCAAG",7,110.16,10.2,-0.63,0.05,2.51,1.03,0,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","TCAGCTGCATATGACT",9,73.98,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V37D V103G",2
"lib2","SARS-CoV-2","TCAGCTGCTTCAGCCT",10,108.11,8.97,-1.86,0.09,1.54,1.1,0,">1 nonsynonymous","I28S P96S",2
"lib2","SARS-CoV-2","TCAGCTGTAAGCTTCA",11,45.59,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G101L S200L",2
"lib2","SARS-CoV-2","TCAGCTGTGCAAACCA",6,63.97,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S113L Y119N T170V Q176N",4
"lib2","SARS-CoV-2","TCAGCTTACAAAGAGA",7,47.3,9.35,-1.49,0.13,1.71,1.05,0.01,">1 nonsynonymous","L5T K94S V115A N151T",4
"lib2","SARS-CoV-2","TCAGCTTGATACCACC",3,66.2,10.14,-0.7,0.06,2.77,1.02,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","TCAGCTTTGCACAGAC",17,72.24,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","A42M C49S N107F E154T",4
"lib2","SARS-CoV-2","TCAGCTTTGCATTACG",1,92.64,9.04,-1.8,0.05,2.94,1.04,0,">1 nonsynonymous","I72L N120Q A145F",3
"lib2","SARS-CoV-2","TCAGGAAAATGTATCG",1,0.12,NA,NA,NA,NA,NA,NA,"stop","N13T V71A W106C Q163*",4
"lib2","SARS-CoV-2","TCAGGAAACCGTCATC",4,13.04,6,-4.84,2,3,1.09,0,">1 nonsynonymous","T3P A42D S43C C49L L57E N64T Y119R",7
"lib2","SARS-CoV-2","TCAGGAAAGGAAACTA",3,37.03,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","G86D P149T Y165T",3
"lib2","SARS-CoV-2","TCAGGAAATAAATGTT",3,58.88,6.46,-4.37,0.45,1.5,1.18,0.02,">1 nonsynonymous","I88G G174N",2
"lib2","SARS-CoV-2","TCAGGAATTCGAGTTA",3,16.63,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T63R V77K Y91R",3
"lib2","SARS-CoV-2","TCAGGAATTGAAATTT",2,6.14,6,-4.84,2,3,1.06,0,">1 nonsynonymous","R27A C61R K94N E141R G146I L183V",6
"lib2","SARS-CoV-2","TCAGGAATTGAGAAAA",9,56.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73T Q84M D112L S139I S200L",5
"lib2","SARS-CoV-2","TCAGGACATTCATACG",5,26.97,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Y93T A105K S129C",3
"lib2","SARS-CoV-2","TCAGGACGACAAGGCG",11,149.84,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V52P A67N G174F",3
"lib2","SARS-CoV-2","TCAGGACTTAGCAATA",2,64.56,10.26,-0.57,0.06,2.76,1.11,0,">1 nonsynonymous","A33S F44L",2
"lib2","SARS-CoV-2","TCAGGAGAAAGAATGT",1,47.05,10.87,0.04,0.04,2.92,1.08,0,"1 nonsynonymous","N58D",1
"lib2","SARS-CoV-2","TCAGGAGCATGAGAAG",14,82.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F47K S53I A105L P149R",4
"lib2","SARS-CoV-2","TCAGGAGCCCAACACG",4,41.5,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A33G C61R Y91P R136G",4
"lib2","SARS-CoV-2","TCAGGAGCTGGAAACT",6,68.51,9.85,-0.99,0.07,2.71,1.1,0,">1 nonsynonymous","C31N N120V",2
"lib2","SARS-CoV-2","TCAGGAGGCTACTGTT",1,0.23,NA,NA,NA,NA,NA,NA,"stop","F62R Q84L D98A Y121* C158S",5
"lib2","SARS-CoV-2","TCAGGAGTGCTAGAAC",1,97.83,10.61,-0.23,0.04,2.89,1.13,0,">1 nonsynonymous","K26R S36F",2
"lib2","SARS-CoV-2","TCAGGATACTAATAAT",1,6.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61P G101L N110H",3
"lib2","SARS-CoV-2","TCAGGATCCACATTTC",2,7.97,10.94,0.1,0.1,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGGATGAACGCACG",13,5.19,NA,NA,NA,NA,NA,NA,"stop","V77* Y91F G116R",3
"lib2","SARS-CoV-2","TCAGGCAAAGTATCAA",3,3.99,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L5A",1
"lib2","SARS-CoV-2","TCAGGCATATCTGCCA",2,31.53,10.61,-0.22,0.05,2.96,1.05,0,"1 nonsynonymous","S36F",1
"lib2","SARS-CoV-2","TCAGGCATTAAGAACT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","D97R F126C T201*",3
"lib2","SARS-CoV-2","TCAGGCCAATAGATGA",1,12.13,10.66,-0.18,0.08,2.97,1,0,">1 nonsynonymous","V37D D97S A145V",3
"lib2","SARS-CoV-2","TCAGGCCATAGCTCGG",3,130.85,10.22,-0.62,0.1,2.64,1.06,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","TCAGGCCCAGATCACA",3,0,NA,NA,NA,NA,NA,NA,"stop","D34H Y91* S129F G172K",4
"lib2","SARS-CoV-2","TCAGGCCCCCTGAAAG",1,7.94,9.8,-1.03,0.21,2.35,1.06,0.02,"1 nonsynonymous","A105N",1
"lib2","SARS-CoV-2","TCAGGCCCTGCCCACC",1,0.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L F44H C61P D137A",4
"lib2","SARS-CoV-2","TCAGGCCCTTTAAACA",3,84.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S29C F70T V77G P96D S113P T201K",6
"lib2","SARS-CoV-2","TCAGGCCGAATCCAAC",4,101.83,6.46,-4.38,0.35,1.5,1.12,0.01,">1 nonsynonymous","W23L N30L",2
"lib2","SARS-CoV-2","TCAGGCGCGTATTTTA",1,9.68,8.62,-2.22,0.2,3,1.12,0.01,">1 nonsynonymous","G117C F156H",2
"lib2","SARS-CoV-2","TCAGGCGGATTGTTTA",5,124.19,10.88,0.04,0.04,2.99,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGGCGGCTTGAACG",5,28.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y91L C102S R136A T201G",4
"lib2","SARS-CoV-2","TCAGGCTATGCATTAG",6,91.46,10.33,-0.51,0.04,2.82,1.11,0,"1 nonsynonymous","A81T",1
"lib2","SARS-CoV-2","TCAGGCTCGATTATGC",9,179.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17G D90E Y143K T201K",4
"lib2","SARS-CoV-2","TCAGGCTGTTTCCGAA",1,15.02,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9P W23R A42S N58K I72V D97V",6
"lib2","SARS-CoV-2","TCAGGGAACCAGCGTA",2,9.34,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","R16Y V103N",2
"lib2","SARS-CoV-2","TCAGGGATTCTAAACC",8,78.36,10.9,0.07,0.08,2.91,1.1,0,">1 nonsynonymous","L122E S147P",2
"lib2","SARS-CoV-2","TCAGGGCATCGAAATT",4,130.67,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","E10S Y121T Y175S",3
"lib2","SARS-CoV-2","TCAGGGGAAGAAACAT",19,237.54,9.11,-1.72,0.07,1.84,1.1,0,">1 nonsynonymous","Y91S F134G T140D",3
"lib2","SARS-CoV-2","TCAGGGGAGTAGGTGC",9,188.36,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","A18R R73T Y159K",3
"lib2","SARS-CoV-2","TCAGGGGCTCAAATTT",4,105.34,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V77P P96E",2
"lib2","SARS-CoV-2","TCAGGGTATTCTTTAG",9,117.02,6,-4.84,1.37,1.5,1.15,0.01,">1 nonsynonymous","V65K F99I S129M F160V",4
"lib2","SARS-CoV-2","TCAGGTAATTAATACT",4,17.43,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","F8L D98G N118Q F126P P149N",5
"lib2","SARS-CoV-2","TCAGGTACAAACTTTG",5,112.06,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","S19L F62L L122G I142T F167T",5
"lib2","SARS-CoV-2","TCAGGTACTGATCTCG",14,201.31,10.27,-0.57,0.04,2.76,1.02,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","TCAGGTATTTAAAGGT",14,3.44,NA,NA,NA,NA,NA,NA,"stop","S36K K56L T85*",3
"lib2","SARS-CoV-2","TCAGGTCCATTTTGCT",5,94.81,10.88,0.04,0.06,2.9,1.1,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TCAGGTCGAGGAAACT",9,0.89,NA,NA,NA,NA,NA,NA,"stop","G9* D68R P169A",3
"lib2","SARS-CoV-2","TCAGGTGAAAGATACT",3,1.14,NA,NA,NA,NA,NA,NA,"stop","T85A D112P Y119H P149*",4
"lib2","SARS-CoV-2","TCAGGTGTGAGGAGAA",2,42.34,10.91,0.08,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGGTTTCATAAGTT",4,33.47,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A42Y K87Q G172C",3
"lib2","SARS-CoV-2","TCAGTAAAATGTTAAT",1,2.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141D F160G",2
"lib2","SARS-CoV-2","TCAGTAACGAATATCT",2,6.26,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N24R S41C A89V D98S S113T",5
"lib2","SARS-CoV-2","TCAGTAAGACAGCGCT",19,366.05,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Q79N K87S Y91G N110E G196I",5
"lib2","SARS-CoV-2","TCAGTAAGTAAAGGAC",1,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A105H",2
"lib2","SARS-CoV-2","TCAGTAAGTAATAAAG",2,14.65,7.94,-2.89,0.17,1.5,1.01,0.01,">1 nonsynonymous","L5I L60S D98L N118T K128P",5
"lib2","SARS-CoV-2","TCAGTAAGTACAAACA",14,120.62,8.98,-1.86,0.14,1.5,1.03,0.01,">1 nonsynonymous","F12M A105N L122E V173L K198I",5
"lib2","SARS-CoV-2","TCAGTAATAATGTTAC",2,50.97,10.41,-0.42,0.06,2.93,1.02,0,">1 nonsynonymous","A42N K114T S139A",3
"lib2","SARS-CoV-2","TCAGTAATCAGCCAAC",4,17.84,9.42,-1.41,0.19,1.94,1.2,0.02,">1 nonsynonymous","K26S D34N E76D K114A E141K",5
"lib2","SARS-CoV-2","TCAGTAATGTTCTAGA",3,1.66,NA,NA,NA,NA,NA,NA,"stop","T55A F62W K87N P177*",4
"lib2","SARS-CoV-2","TCAGTACAAGTCTAGA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","K48N D98Y V103* V173T",4
"lib2","SARS-CoV-2","TCAGTACACCAGACCT",11,17.93,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13Q Y35N V103P K114P N157L",5
"lib2","SARS-CoV-2","TCAGTACCTGTCGAAG",5,32.98,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V37T P82T R124Y",3
"lib2","SARS-CoV-2","TCAGTACTAAAAGTGT",4,11.08,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G9P G51A R73L D112I Y119S C158V",6
"lib2","SARS-CoV-2","TCAGTACTAGTCAGAT",4,13.15,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","D59E G83V Y93R T100A N157L",5
"lib2","SARS-CoV-2","TCAGTACTTAATAACA",3,10.19,10.27,-0.56,0.17,2.69,1.09,0.03,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","TCAGTACTTGAAGATT",5,67.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P7Q L38T K48L A145S F167L",5
"lib2","SARS-CoV-2","TCAGTACTTGACAGAC",3,123.52,10.84,0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGTAGACGCCCCAT",3,2.89,NA,NA,NA,NA,NA,NA,"stop","I80* N130W",2
"lib2","SARS-CoV-2","TCAGTAGCACAATATT",1,64.51,8.54,-2.29,0.14,2.97,1.03,0.01,"1 nonsynonymous","G166P",1
"lib2","SARS-CoV-2","TCAGTAGCTACATCTG",4,0.18,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib2","SARS-CoV-2","TCAGTAGTCTACACGA",3,165.96,10.77,-0.06,0.04,2.97,1.06,0,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","TCAGTATCAAATGAAT",6,35.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N92R G155V",2
"lib2","SARS-CoV-2","TCAGTATCCCGCTAAA",1,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86C E154T Y178C",3
"lib2","SARS-CoV-2","TCAGTATCGCAAAACC",1,60.48,10.68,-0.15,0.07,2.96,1.03,0,">1 nonsynonymous","R27T S184Q",2
"lib2","SARS-CoV-2","TCAGTATTATTTTCTT",4,0.77,NA,NA,NA,NA,NA,NA,"stop","L187*",1
"lib2","SARS-CoV-2","TCAGTCAAACTATATT",1,8.07,8.29,-2.55,0.14,2.77,1,0.01,">1 nonsynonymous","A145D G166A",2
"lib2","SARS-CoV-2","TCAGTCAGAGTAATTC",10,118.33,10,-0.83,0.07,2.44,1.01,0,"1 nonsynonymous","V103T",1
"lib2","SARS-CoV-2","TCAGTCATTTATTGTA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","E10D V37L Y121* P149C",4
"lib2","SARS-CoV-2","TCAGTCCAGTTAGAGA",5,49.96,10.8,-0.04,0.04,2.91,1.1,0,">1 nonsynonymous","T55S N120D T201S",3
"lib2","SARS-CoV-2","TCAGTCCATGAATAAC",5,65.82,6,-4.84,0.81,1.74,1.14,0,">1 nonsynonymous","R124H Y143C V173L",3
"lib2","SARS-CoV-2","TCAGTCCATTTAATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","K132N F160L L183*",3
"lib2","SARS-CoV-2","TCAGTCCGATGCTGAA",1,42.83,10.66,-0.18,0.08,2.85,1.14,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TCAGTCCTTGAATCGA",5,83.88,8.57,-2.26,0.18,1.5,1.13,0.02,">1 nonsynonymous","Y66Q N92S L122T",3
"lib2","SARS-CoV-2","TCAGTCGACTTTGAAG",2,23.33,10.42,-0.42,0.07,2.73,1.28,0,">1 nonsynonymous","L5C S147L",2
"lib2","SARS-CoV-2","TCAGTCGATCCTCTAA",9,52.09,6,-4.84,2,1.5,1.25,0.03,"1 nonsynonymous","L95Q",1
"lib2","SARS-CoV-2","TCAGTCGGATACCATT",2,13.4,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T55S N64W P82L N120G P197R",5
"lib2","SARS-CoV-2","TCAGTCGTACTTTCCC",4,0,NA,NA,NA,NA,NA,NA,"stop","F47* P54L",2
"lib2","SARS-CoV-2","TCAGTCGTTAGTATAC",2,56.04,8.2,-2.64,0.12,2.86,1.06,0.01,">1 nonsynonymous","K114T N157R",2
"lib2","SARS-CoV-2","TCAGTCTCTGAGGACC",3,24.36,6.75,-4.08,0.4,1.5,1.07,0.03,">1 nonsynonymous","C6R S41P D97L V153C F160A",5
"lib2","SARS-CoV-2","TCAGTGAACAACTACG",1,4.3,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","TCAGTGACTTTAGGAC",1,62.47,10.17,-0.67,0.03,2.9,1.06,0,">1 nonsynonymous","R27I G174L",2
"lib2","SARS-CoV-2","TCAGTGAGGAATTATA",4,51.28,10.66,-0.17,0.05,2.85,1.16,0,">1 nonsynonymous","G9F T15R L122A",3
"lib2","SARS-CoV-2","TCAGTGATTGGACGCG",3,8.72,10.29,-0.55,0.13,2.8,1.1,0.01,">1 nonsynonymous","L5H L122S G155S G174D",4
"lib2","SARS-CoV-2","TCAGTGATTTCATTCA",8,169.63,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S69C G117V Q176L",3
"lib2","SARS-CoV-2","TCAGTGCTAACCAATT",4,5.22,7.76,-3.07,0.36,3,1.05,0.01,">1 nonsynonymous","V11P A33M F62V D98I V103L S139R V180Y S184T",8
"lib2","SARS-CoV-2","TCAGTGGAAAATTTCT",4,99.96,10.82,-0.02,0.04,2.89,1.12,0,"1 nonsynonymous","S29H",1
"lib2","SARS-CoV-2","TCAGTTAAATTTAATA",11,41.52,7.35,-3.48,0.19,1.5,1.1,0.01,">1 nonsynonymous","D59P V77L Y121S",3
"lib2","SARS-CoV-2","TCAGTTAACAGCTCCG",4,3.4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92G",1
"lib2","SARS-CoV-2","TCAGTTACCAATCCTG",6,84.45,6.01,-4.82,1.04,1.5,1.22,0.02,">1 nonsynonymous","F62Q N157P A190R T201M",4
"lib2","SARS-CoV-2","TCAGTTACGAACGAAC",6,71.64,10.67,-0.17,0.03,2.94,1.04,0,">1 nonsynonymous","A67L E141S",2
"lib2","SARS-CoV-2","TCAGTTACTACAGGCA",5,70.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Q84K N92R",2
"lib2","SARS-CoV-2","TCAGTTACTGTGAGCA",6,82.62,10.8,-0.03,0.06,2.89,1.13,0,"1 nonsynonymous","T63G",1
"lib2","SARS-CoV-2","TCAGTTAGATATAGGT",4,89.65,10.74,-0.09,0.1,2.71,1.05,0,">1 nonsynonymous","R16W S43F",2
"lib2","SARS-CoV-2","TCAGTTAGTACTTTCA",4,38.01,10.76,-0.07,0.1,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCAGTTATAAATAATA",2,132.42,10.41,-0.43,0.03,2.96,1.06,0,">1 nonsynonymous","N64T D98N G152V",3
"lib2","SARS-CoV-2","TCAGTTATCAAAACAT",12,3.03,NA,NA,NA,NA,NA,NA,"stop","A14G K87G I104V R136*",4
"lib2","SARS-CoV-2","TCAGTTCCGCTTTAGT",5,39.25,6.06,-4.78,0.81,1.5,1.13,0.01,">1 nonsynonymous","C6F W23G L60R N157T",4
"lib2","SARS-CoV-2","TCAGTTCGGCTCGACG",2,0.52,NA,NA,NA,NA,NA,NA,"stop","E10* A18L F126T T140S T201E",5
"lib2","SARS-CoV-2","TCAGTTCTCAGGATAC",6,48.76,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","F17M L95N P133G",3
"lib2","SARS-CoV-2","TCAGTTGAACGGCAGG",4,2.38,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","TCAGTTGCACATGTTA",5,11.19,10.43,-0.4,0.07,2.99,1.03,0,">1 nonsynonymous","T3G S29A T55N I104F L125G",5
"lib2","SARS-CoV-2","TCAGTTGCTACGACAT",11,96.72,6,-4.84,1.85,1.5,1.14,0.01,">1 nonsynonymous","G51K V103C N120L",3
"lib2","SARS-CoV-2","TCAGTTGGACACCACA",11,137.55,10.57,-0.26,0.04,2.92,1.07,0,">1 nonsynonymous","T15V R27T T201N",3
"lib2","SARS-CoV-2","TCAGTTGTTCAAACTA",15,112.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9F A18T S29H Y50F D112M Y178S",6
"lib2","SARS-CoV-2","TCAGTTTAAGCTACTA",2,30.93,10.86,0.02,0.05,2.99,1,0,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","TCAGTTTAGAGGTGTG",5,0.21,NA,NA,NA,NA,NA,NA,"stop","N1V S41L D59* I138F V173F",5
"lib2","SARS-CoV-2","TCAGTTTATGCAATAT",3,17.8,10.31,-0.52,0.1,2.57,1.01,0.01,">1 nonsynonymous","N40E G51D T201L",3
"lib2","SARS-CoV-2","TCAGTTTTGAAGCTTC",3,38.05,8.93,-1.9,0.1,2.73,1.11,0,">1 nonsynonymous","R16C G155P",2
"lib2","SARS-CoV-2","TCATAAAAAAGAGCTA",11,71.26,8.56,-2.28,0.21,1.5,1,0.03,">1 nonsynonymous","D59V W106S",2
"lib2","SARS-CoV-2","TCATAAAAACAAACGA",5,86.63,10.01,-0.82,0.06,2.71,1.01,0,">1 nonsynonymous","R78F R136M",2
"lib2","SARS-CoV-2","TCATAAAAACTTTACA",1,5.9,10.79,-0.05,0.03,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATAAAAAGACGGAT",3,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29T L60T G86Y",3
"lib2","SARS-CoV-2","TCATAAAACTAGGTTG",6,142.67,9.08,-1.76,0.06,2.86,1.07,0,">1 nonsynonymous","A22R I142T F156S",3
"lib2","SARS-CoV-2","TCATAAAACTGGAATC",1,12.97,10.6,-0.24,0.07,2.87,1.09,0,">1 nonsynonymous","R16G K48T T201W",3
"lib2","SARS-CoV-2","TCATAAAAGTTTGAAA",1,12.85,7.77,-3.07,0.15,2.44,1.01,0,">1 nonsynonymous","C158R N171A",2
"lib2","SARS-CoV-2","TCATAAAATTTAAGTT",6,1.45,NA,NA,NA,NA,NA,NA,"stop","T55*",1
"lib2","SARS-CoV-2","TCATAAACATATAAAC",2,0.09,NA,NA,NA,NA,NA,NA,"stop","R27E G86* K94N A192F",4
"lib2","SARS-CoV-2","TCATAAAGAAAATACA",5,9.8,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V103M S113Q R124S E141K F185G",5
"lib2","SARS-CoV-2","TCATAAAGAAATAGAT",1,9.45,10.55,-0.29,0.13,2.79,1,0.01,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","TCATAAAGAGTAATAC",1,13.07,10.81,-0.03,0.16,2.81,1.13,0.01,">1 nonsynonymous","T3L N120H S147T",3
"lib2","SARS-CoV-2","TCATAAAGATCTACCC",8,102.45,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","W23K F167I",2
"lib2","SARS-CoV-2","TCATAAAGATTGCATT",7,76.7,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V32E G83E D98L K114L Y143C Q168T",6
"lib2","SARS-CoV-2","TCATAAAGCTCCTTCA",5,131.54,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","D68L N120V G146Q",3
"lib2","SARS-CoV-2","TCATAAATACTCTTAC",14,138.13,10.6,-0.23,0.02,2.95,1.03,0,">1 nonsynonymous","D59L S147A",2
"lib2","SARS-CoV-2","TCATAAATAGGTGACA",4,11.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93A V103M",2
"lib2","SARS-CoV-2","TCATAAATCACCAGAA",3,2.11,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91H",1
"lib2","SARS-CoV-2","TCATAAATCTAATCTT",3,71.3,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I80T F99S A105E F160L",4
"lib2","SARS-CoV-2","TCATAAATTTATATTG",3,147.83,8.88,-1.96,0.08,2.87,1.17,0,">1 nonsynonymous","K87R G174I",2
"lib2","SARS-CoV-2","TCATAACAAAACGGTC",1,0.7,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCATAACACCCATCCT",19,337.28,10.33,-0.5,0.02,2.97,1.05,0,">1 nonsynonymous","N64C G174M",2
"lib2","SARS-CoV-2","TCATAACACGAGACTA",6,2.61,NA,NA,NA,NA,NA,NA,"stop","C6V K26V Y39* A105M",4
"lib2","SARS-CoV-2","TCATAACACGCTTGCT",2,29.52,10.63,-0.2,0.03,2.93,1.06,0,">1 nonsynonymous","F8M V52I",2
"lib2","SARS-CoV-2","TCATAACAGAACAAGA",6,49.51,8.11,-2.72,0.35,1.5,1,0.05,">1 nonsynonymous","T55V G86Q T140S",3
"lib2","SARS-CoV-2","TCATAACAGATGACCA",1,12.07,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","C6E T100D I138L A145T P197S",5
"lib2","SARS-CoV-2","TCATAACAGTGACTCT",2,46.46,10.87,0.03,0.06,2.9,1.1,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TCATAACATTATAGTT",4,19.72,6.07,-4.76,2,3,1.03,0,">1 nonsynonymous","C6L C61V K94G G174I",4
"lib2","SARS-CoV-2","TCATAACCAGCAAGAT",3,27.97,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V37W C61G W106D P161V V181F",5
"lib2","SARS-CoV-2","TCATAACCATAGGTAA",9,132.91,10.75,-0.08,0.04,2.89,1.12,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","TCATAACCTTCTCATA",2,59.25,9.57,-1.27,0.06,2.95,1.07,0,"1 nonsynonymous","A145K",1
"lib2","SARS-CoV-2","TCATAACGAATGTGGA",1,11.56,9.82,-1.02,0.17,2.26,1.09,0.01,"1 nonsynonymous","A105H",1
"lib2","SARS-CoV-2","TCATAACGATTATCTA",4,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P S43P D90F E141P P161Y Q168D",6
"lib2","SARS-CoV-2","TCATAACGTCCACGAT",6,70.47,8.2,-2.64,0.14,1.5,1.1,0.01,">1 nonsynonymous","A14I Y121V T201D",3
"lib2","SARS-CoV-2","TCATAACTAGAATAAG",1,37.42,10.69,-0.14,0.04,2.98,1.02,0,">1 nonsynonymous","L60A V115S",2
"lib2","SARS-CoV-2","TCATAACTATGCACAC",10,81.5,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L57G D68S Q84F N171V",4
"lib2","SARS-CoV-2","TCATAACTCTAGATTT",1,15.88,9.21,-1.62,0.14,1.64,1.16,0.01,">1 nonsynonymous","V65I L95M F99A",3
"lib2","SARS-CoV-2","TCATAACTTAAATAAC",10,98.59,10.44,-0.4,0.04,2.9,1.07,0,">1 nonsynonymous","I142F N151D",2
"lib2","SARS-CoV-2","TCATAACTTTAAGAAA",1,17.17,7.81,-3.03,0.33,1.61,1.17,0.04,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","TCATAAGAATACAGAG",3,16.9,9.73,-1.11,0.18,1.99,1.08,0.01,">1 nonsynonymous","F17S C61A",2
"lib2","SARS-CoV-2","TCATAAGACAAAGGAA",4,89.76,10.33,-0.51,0.04,2.89,1.02,0,"1 nonsynonymous","N107P",1
"lib2","SARS-CoV-2","TCATAAGACATAGACC",14,166.36,10.74,-0.1,0.02,2.95,1.04,0,">1 nonsynonymous","T3M N120S",2
"lib2","SARS-CoV-2","TCATAAGACGTAACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23E I28* K48N Y93A E186H",5
"lib2","SARS-CoV-2","TCATAAGAGATTCAAT",10,1.87,NA,NA,NA,NA,NA,NA,"stop","S69* Y91L L95Q F160S T170F S184H",6
"lib2","SARS-CoV-2","TCATAAGAGCCCTACG",5,92.2,10.35,-0.49,0.04,2.88,1.03,0,">1 nonsynonymous","P54S N58M D97P K128T",4
"lib2","SARS-CoV-2","TCATAAGATAACCATG",2,12.71,10.08,-0.75,0.11,2.82,1.02,0,"1 nonsynonymous","V11Y",1
"lib2","SARS-CoV-2","TCATAAGATCATCTGG",3,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22E F62N F99T V153M Q163A",5
"lib2","SARS-CoV-2","TCATAAGCATATACGT",14,116.3,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A89L Y119S",2
"lib2","SARS-CoV-2","TCATAAGCATTCAGGA",1,7.61,8.11,-2.72,0.38,1.9,1.19,0.06,">1 nonsynonymous","G9N A22C E76K T201E",4
"lib2","SARS-CoV-2","TCATAAGCTCGTTTGG",12,380.72,10.32,-0.52,0.03,2.82,1.05,0,">1 nonsynonymous","F44Y G155N",2
"lib2","SARS-CoV-2","TCATAAGGTTACAGTA",13,49.57,6.19,-4.65,0.59,1.5,1.14,0.02,"1 nonsynonymous","I88G",1
"lib2","SARS-CoV-2","TCATAAGGTTTCTTAT",2,41.79,9.08,-1.76,0.09,2.65,1.05,0,">1 nonsynonymous","N118V Q168S",2
"lib2","SARS-CoV-2","TCATAAGTAAATACAT",9,157.53,8.32,-2.52,0.13,2.67,1.07,0.01,"1 nonsynonymous","S113L",1
"lib2","SARS-CoV-2","TCATAAGTAGTTTTTT",15,143.59,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F44L C49V L57Y",3
"lib2","SARS-CoV-2","TCATAAGTCCCGACAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S29*",1
"lib2","SARS-CoV-2","TCATAAGTGCGGATTT",2,76.08,10.79,-0.05,0.05,2.86,1.17,0,">1 nonsynonymous","L5N V37G F44W",3
"lib2","SARS-CoV-2","TCATAAGTGGCCGGTA",7,149.63,10.54,-0.29,0.04,2.98,1.04,0,">1 nonsynonymous","S43T G116I",2
"lib2","SARS-CoV-2","TCATAAGTGGTTAGAA",1,7.94,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","R27P Y35G F44L G74N Q84A A190M",6
"lib2","SARS-CoV-2","TCATAATAAACCGTGC",3,41.33,7.18,-3.66,0.33,1.5,1.11,0.03,">1 nonsynonymous","E10K V37M L57G E135S E141V V173K",6
"lib2","SARS-CoV-2","TCATAATAGGAAAGAA",1,12.23,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","A14Y I88L F156T",3
"lib2","SARS-CoV-2","TCATAATCACAGTACT",2,38.91,8.69,-2.14,0.17,1.73,1.09,0.01,">1 nonsynonymous","A33W F44C L60T G152V",4
"lib2","SARS-CoV-2","TCATAATCACTCGCTT",2,21.78,9.33,-1.5,0.17,1.94,1.19,0.01,">1 nonsynonymous","P133K F160T E186S",3
"lib2","SARS-CoV-2","TCATAATGAACCGAAT",2,2.25,NA,NA,NA,NA,NA,NA,"stop","L5R I80* Q176R",3
"lib2","SARS-CoV-2","TCATAATGCTCTTTAA",5,60.49,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44S D68P Y123D",3
"lib2","SARS-CoV-2","TCATAATGCTGATGAG",5,19.73,8.57,-2.27,0.29,1.5,1.01,0.07,">1 nonsynonymous","R27S F99L G155C V173K",4
"lib2","SARS-CoV-2","TCATAATGTTAATATG",5,23.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12R S19E V115T F126T",4
"lib2","SARS-CoV-2","TCATAATTAGGCTTGT",9,124.03,10.13,-0.7,0.08,2.69,1.07,0,">1 nonsynonymous","A33S P96S",2
"lib2","SARS-CoV-2","TCATAATTTGAATGCC",11,53.21,6.47,-4.37,0.16,1.5,1.04,0,">1 nonsynonymous","F47N C102H",2
"lib2","SARS-CoV-2","TCATACAAAAATAAGG",19,0.47,NA,NA,NA,NA,NA,NA,"stop","V77* D90N E154Y",3
"lib2","SARS-CoV-2","TCATACAAACTGCAAG",4,120.72,8.79,-2.05,0.11,1.78,1.09,0,">1 nonsynonymous","Y91I Y121N",2
"lib2","SARS-CoV-2","TCATACAAAGTTAAAC",11,72.21,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I2K D34P I88M F134P G174P",5
"lib2","SARS-CoV-2","TCATACAACATAACAG",4,58.57,10.55,-0.29,0.04,2.96,1.05,0,"1 nonsynonymous","E10R",1
"lib2","SARS-CoV-2","TCATACAAGCCAGGCG",2,22.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S K56M G83F N107T Y119F",5
"lib2","SARS-CoV-2","TCATACACAAAACACA",3,79.18,10.64,-0.19,0.04,2.93,1.09,0,">1 nonsynonymous","T63S G83Q",2
"lib2","SARS-CoV-2","TCATACACAAATAAAT",4,50.81,10.51,-0.32,0.05,2.92,1.1,0,">1 nonsynonymous","K26A C61S",2
"lib2","SARS-CoV-2","TCATACACATTCGTCA",3,50.75,10.58,-0.26,0.05,2.98,1.02,0,">1 nonsynonymous","A81E V115L",2
"lib2","SARS-CoV-2","TCATACAGACAAGAAC",9,78.29,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K56R I80T Y119H P161I",4
"lib2","SARS-CoV-2","TCATACAGCAGTCGTA",10,295.64,10.07,-0.77,0.03,2.85,1.04,0,"1 nonsynonymous","Y121K",1
"lib2","SARS-CoV-2","TCATACAGTGTCAACC",2,0.86,NA,NA,NA,NA,NA,NA,"stop","P54R Q84*",2
"lib2","SARS-CoV-2","TCATACAGTTCCGAAA",6,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34C K56I",2
"lib2","SARS-CoV-2","TCATACATATATACCT",4,68.04,6,-4.84,0.89,3,1.15,0.01,">1 nonsynonymous","D68W D90P D98E W106S Q176F",5
"lib2","SARS-CoV-2","TCATACATCCAATTAG",9,88.72,9.86,-0.98,0.07,2.16,1.05,0,">1 nonsynonymous","L57T S147F S164N",3
"lib2","SARS-CoV-2","TCATACATCCGCCTGA",4,35.21,10.83,-0.01,0.07,2.89,1.08,0,">1 nonsynonymous","D97F P191R T201R",3
"lib2","SARS-CoV-2","TCATACATCTTAACAT",2,21.3,10.79,-0.05,0.06,2.96,1.09,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TCATACATTGGCCCAT",9,2,NA,NA,NA,NA,NA,NA,"stop","A42R T100W N107* P133R",4
"lib2","SARS-CoV-2","TCATACCAATATCTGT",1,6,6,-4.84,2,1.5,1.11,0.06,">1 nonsynonymous","V52K I104S",2
"lib2","SARS-CoV-2","TCATACCAGAACAATT",7,41.78,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G146W P161Y",2
"lib2","SARS-CoV-2","TCATACCATATATAAA",4,36.68,6,-4.84,2,1.5,1.37,0.06,">1 nonsynonymous","N58R N92Q",2
"lib2","SARS-CoV-2","TCATACCCAAAAAATG",1,35.52,10.68,-0.16,0.05,2.95,1.08,0,">1 nonsynonymous","C61Y S200L",2
"lib2","SARS-CoV-2","TCATACCCACATACGG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","R16* S147I",2
"lib2","SARS-CoV-2","TCATACCGTTGGATAG",4,23.77,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N107Y K114D",2
"lib2","SARS-CoV-2","TCATACCTACATACCA",3,16.61,8.47,-2.36,0.19,1.5,1.09,0.01,">1 nonsynonymous","S41F Y50M P149I",3
"lib2","SARS-CoV-2","TCATACGGCAGATATC",4,40.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y D98P S200I",3
"lib2","SARS-CoV-2","TCATACGTAAATAAGT",1,5.37,10.77,-0.06,0.1,2.99,1,0,">1 nonsynonymous","N40Y T46Y",2
"lib2","SARS-CoV-2","TCATACGTGGTCGACT",3,9.86,10.05,-0.79,0.16,2.28,1.1,0.02,">1 nonsynonymous","N58D E135H P149I",3
"lib2","SARS-CoV-2","TCATACTCTTGAACCC",2,7.13,NA,NA,NA,NA,NA,NA,"stop","L5* L38* C61S",3
"lib2","SARS-CoV-2","TCATACTTAAAGTTTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104P P161L",2
"lib2","SARS-CoV-2","TCATACTTAGACACTG",4,36.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K D98L",2
"lib2","SARS-CoV-2","TCATACTTGTAGCAAG",2,40.73,10.1,-0.74,0.05,2.85,1,0,">1 nonsynonymous","T3A N107S",2
"lib2","SARS-CoV-2","TCATACTTTCGTTAAT",4,39.89,10.97,0.14,0.04,2.91,1.1,0,"1 nonsynonymous","Y35F",1
"lib2","SARS-CoV-2","TCATAGAAAAAAAACC",5,212.12,10.84,0,0.03,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATAGAAAAGTCTCC",3,41.25,10.42,-0.42,0.07,2.89,1.1,0,">1 nonsynonymous","V37L E141C",2
"lib2","SARS-CoV-2","TCATAGAATCCAGTAC",7,3.52,NA,NA,NA,NA,NA,NA,"stop","I2L G9P E10* S43T Y50L D97T",6
"lib2","SARS-CoV-2","TCATAGAATCGCCAAG",4,62.7,10.72,-0.12,0.06,2.86,1.13,0,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","TCATAGAGCAGTAAAA",4,36.5,7.58,-3.25,0.13,2.39,1.13,0.01,"1 nonsynonymous","Y175D",1
"lib2","SARS-CoV-2","TCATAGCGCCCGTCCA",6,92.54,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","W23G L111T G117L T148A",4
"lib2","SARS-CoV-2","TCATAGCGGTATCAGA",8,138.3,9.3,-1.54,0.1,1.7,1.11,0.01,">1 nonsynonymous","Y35T P96T",2
"lib2","SARS-CoV-2","TCATAGCGTGGAAGGG",6,20.46,10,-0.83,0.26,1.5,1,0.04,">1 nonsynonymous","F12R F17L T85H",3
"lib2","SARS-CoV-2","TCATAGCTGCCTAAAA",3,35.46,6,-4.84,0.78,1.77,1.07,0.01,">1 nonsynonymous","L5G L60V N92V F134A",4
"lib2","SARS-CoV-2","TCATAGGCCGTTCACA",5,75.31,10.77,-0.07,0.03,2.93,1.1,0,">1 nonsynonymous","Y39L I88V",2
"lib2","SARS-CoV-2","TCATAGTATTTGAACT",2,17.9,10.64,-0.2,0.05,2.92,1.07,0,">1 nonsynonymous","G9P A42L",2
"lib2","SARS-CoV-2","TCATAGTCAAACATTA",3,11.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72M F126N",2
"lib2","SARS-CoV-2","TCATAGTCACATGTCG",16,354.66,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5Q N40E N64V G101W Q176L",5
"lib2","SARS-CoV-2","TCATAGTTTACTAACG",12,3.79,NA,NA,NA,NA,NA,NA,"stop","D90S L122P Y175*",3
"lib2","SARS-CoV-2","TCATATAAAACAATAA",5,0.59,NA,NA,NA,NA,NA,NA,"stop","S41A L60* K87N I142S",4
"lib2","SARS-CoV-2","TCATATACCCTCCCTC",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L N107D S139N Q168A",4
"lib2","SARS-CoV-2","TCATATACGCAGGAGT",4,69.95,8.8,-2.03,0.1,1.5,1.1,0,">1 nonsynonymous","F12R R27A V37Y",3
"lib2","SARS-CoV-2","TCATATATCGCATACA",9,19.78,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41L D90H N120A L162C",4
"lib2","SARS-CoV-2","TCATATATGACCGCGA",7,154.06,8.71,-2.12,0.08,2.95,1.09,0,"1 nonsynonymous","G166F",1
"lib2","SARS-CoV-2","TCATATATTAAGGGCG",4,79.21,8.46,-2.38,0.13,2.86,1.02,0.01,">1 nonsynonymous","T55K N107E N157D",3
"lib2","SARS-CoV-2","TCATATATTTATAAAT",3,6.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N157Y S200L",2
"lib2","SARS-CoV-2","TCATATCAACCTGAAA",6,0.64,NA,NA,NA,NA,NA,NA,"stop","D90T A105* T148S E186W",4
"lib2","SARS-CoV-2","TCATATCACATAATTT",1,11.37,9.75,-1.09,0.31,1.61,1.07,0.03,">1 nonsynonymous","S41G P54L W106S",3
"lib2","SARS-CoV-2","TCATATCATACGTATT",2,1.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47N K128C",2
"lib2","SARS-CoV-2","TCATATCCTAAACGCA",1,18.68,10.82,-0.02,0.06,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATATCTTGCAAAAT",2,25.74,10.77,-0.07,0.07,2.93,1.1,0,"1 nonsynonymous","T201Y",1
"lib2","SARS-CoV-2","TCATATGAAAATCATA",4,36.25,9.97,-0.87,0.11,2.16,1.02,0,">1 nonsynonymous","D34R I72L T85N",3
"lib2","SARS-CoV-2","TCATATGAATTTATCA",8,0.39,NA,NA,NA,NA,NA,NA,"stop","T46Q I104K N120Q G146* E186F A192E",6
"lib2","SARS-CoV-2","TCATATGATAAACATG",5,31.34,9.83,-1.01,0.12,2.03,1.09,0,">1 nonsynonymous","D90L W106M",2
"lib2","SARS-CoV-2","TCATATGCATTGATAA",4,156.61,10.79,-0.04,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATATGCTACATATT",1,7.6,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","R16S A22T G86S N107Y K198W",5
"lib2","SARS-CoV-2","TCATATGCTCCCACAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F E141L",2
"lib2","SARS-CoV-2","TCATATGTAAAGATAG",4,66.77,10.73,-0.1,0.04,2.92,1.09,0,"1 nonsynonymous","L111H",1
"lib2","SARS-CoV-2","TCATATGTACTTTAAC",3,55.19,8.58,-2.26,0.15,2.04,1.16,0.01,">1 nonsynonymous","R78D N120W S129I Y165F",4
"lib2","SARS-CoV-2","TCATATGTATATTCAA",6,31.85,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","F12R G83D C102K",3
"lib2","SARS-CoV-2","TCATATGTCGGAAATT",2,5.17,6,-4.84,2,1.5,1.06,0.04,"1 nonsynonymous","R179W",1
"lib2","SARS-CoV-2","TCATATGTCTAGGTCA",3,49.61,9.48,-1.36,0.09,1.8,1.08,0,">1 nonsynonymous","A89F N130T P149D",3
"lib2","SARS-CoV-2","TCATATTAAAGCTCAA",2,10.98,NA,NA,NA,NA,NA,0.41,">1 nonsynonymous","V71H D90Y D98V",3
"lib2","SARS-CoV-2","TCATATTAACGCACTC",6,89.19,10.82,-0.02,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATATTAATGTGCTT",7,0.56,NA,NA,NA,NA,NA,NA,"stop","I2* G86S P133L",3
"lib2","SARS-CoV-2","TCATATTACGTACGTG",5,19.71,6,-4.84,1.09,2.32,1.12,0,">1 nonsynonymous","D68R D98L D112Y G152V",4
"lib2","SARS-CoV-2","TCATATTACTAATAAC",1,31.26,9.91,-0.93,0.08,2.44,1.01,0,">1 nonsynonymous","G83Q P133V",2
"lib2","SARS-CoV-2","TCATATTATACTCGAT",14,113.6,9.35,-1.48,0.06,1.76,1.1,0,">1 nonsynonymous","L5A C61M R73K F99L",4
"lib2","SARS-CoV-2","TCATATTCAACCACCC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14K K48A C49R K87* Y91L K128M S184K",7
"lib2","SARS-CoV-2","TCATATTCGGTAAGAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y66E Y121T A145*",3
"lib2","SARS-CoV-2","TCATATTGAATAAAAA",1,1.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S A14E N64Q L95A G146M",5
"lib2","SARS-CoV-2","TCATATTGCCCGCGAC",14,150.3,9.27,-1.57,0.07,1.78,1.06,0,">1 nonsynonymous","A14S C49V",2
"lib2","SARS-CoV-2","TCATATTGCGGTTGAA",2,17.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","P96L V103T K198F",3
"lib2","SARS-CoV-2","TCATATTGTCCATACA",10,74.15,9.14,-1.69,0.15,1.5,1.11,0.01,">1 nonsynonymous","C49S L122W Q163Y",3
"lib2","SARS-CoV-2","TCATATTGTGCAAACG",1,39.07,10.08,-0.76,0.13,2.35,1.08,0.01,">1 nonsynonymous","Q144L Q163L T201I",3
"lib2","SARS-CoV-2","TCATATTTAATACATT",12,52,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T55I F99V T140S G196W",4
"lib2","SARS-CoV-2","TCATATTTCAGTACGA",5,23.24,10.48,-0.35,0.09,2.92,1.04,0,">1 nonsynonymous","S45N D97I",2
"lib2","SARS-CoV-2","TCATATTTCCACGGTG",4,53.63,8.67,-2.16,0.08,2.94,1.11,0,">1 nonsynonymous","G9E A105S G117E A190Y",4
"lib2","SARS-CoV-2","TCATCAAACTTGCATT",6,114.81,10.5,-0.34,0.03,2.9,1.05,0,">1 nonsynonymous","N64T D90Y",2
"lib2","SARS-CoV-2","TCATCAAAGTATTTTA",7,56.35,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C6N W23L S45A",3
"lib2","SARS-CoV-2","TCATCAACGCTTCGAC",3,30.59,8.42,-2.41,0.25,1.5,1.08,0.04,">1 nonsynonymous","L5H I104R L111I L188G",4
"lib2","SARS-CoV-2","TCATCAAGACTAATAA",2,6.97,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61S P96D S139A G174Y",4
"lib2","SARS-CoV-2","TCATCAAGATAACAAA",1,10.98,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W23V R27V D34V D137L",4
"lib2","SARS-CoV-2","TCATCAAGATGGCTGT",5,0.43,NA,NA,NA,NA,NA,NA,"stop","L5V S53W V77M S113Y Y121T P197*",6
"lib2","SARS-CoV-2","TCATCAATAAGGAATC",5,112.34,10.91,0.08,0.05,2.96,1.05,0,">1 nonsynonymous","I2S I28W T201R",3
"lib2","SARS-CoV-2","TCATCAATGCTATGAT",1,21.54,6.87,-3.97,0.49,1.5,1.04,0.07,">1 nonsynonymous","C61S L131R Q168N K198M",4
"lib2","SARS-CoV-2","TCATCAATTTCACCAA",2,11.08,10.76,-0.07,0.02,3,1,0,">1 nonsynonymous","R78K I138F",2
"lib2","SARS-CoV-2","TCATCACAACATCGAC",7,51.39,10.93,0.09,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATCACAATAAAATC",3,6.52,6,-4.84,2,3,1.05,0,">1 nonsynonymous","Y50S A81E D98F Q144S V180N",5
"lib2","SARS-CoV-2","TCATCACAGCATGGCG",1,24.17,10.08,-0.76,0.06,2.72,1.06,0,">1 nonsynonymous","K56L F185I",2
"lib2","SARS-CoV-2","TCATCACAGTCAAAAT",1,31.72,8.51,-2.33,0.18,2.47,1.04,0.01,">1 nonsynonymous","S129F E141F Q168L",3
"lib2","SARS-CoV-2","TCATCACATAACTCCA",3,0.16,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","TCATCACCCTAACGGA",6,9.99,NA,NA,NA,NA,NA,NA,"stop","R25* D98L",2
"lib2","SARS-CoV-2","TCATCACCCTAGCCAC",7,7.17,8.85,-1.99,0.24,1.55,1.13,0.02,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","TCATCACGATAGAAAC",9,231.9,9.87,-0.97,0.05,2.42,1.01,0,"1 nonsynonymous","R136E",1
"lib2","SARS-CoV-2","TCATCAGAACAAACGA",4,14.63,10.77,-0.07,0.09,2.89,1.16,0,"1 nonsynonymous","N151Y",1
"lib2","SARS-CoV-2","TCATCAGAATCCTGAG",3,39.67,8.94,-1.9,0.06,2.84,1.14,0,">1 nonsynonymous","G9A E141Q G166W",3
"lib2","SARS-CoV-2","TCATCAGCAGGGAAAT",4,1418.84,6,-4.84,0.77,1.5,1.12,0,">1 nonsynonymous","N157D Q176V",2
"lib2","SARS-CoV-2","TCATCAGCCTAGATAT",3,59.07,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K56L D90I N107P D137Y Y178S",5
"lib2","SARS-CoV-2","TCATCAGCGACCACAT",11,236.97,10.85,0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATCAGCTTTCTAAC",6,80.46,9.71,-1.13,0.07,2.1,1.07,0,">1 nonsynonymous","S29G Y39L S45M D90L",4
"lib2","SARS-CoV-2","TCATCAGTATTATGCA",2,22.05,9.67,-1.17,0.14,1.56,1.04,0.01,">1 nonsynonymous","F99H S129Y",2
"lib2","SARS-CoV-2","TCATCATAGGAGCTCA",1,1.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136H L183H",2
"lib2","SARS-CoV-2","TCATCATATTTCCTGT",2,25.27,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","R16I Y39Q G101D Y143A",4
"lib2","SARS-CoV-2","TCATCATCTAGACACC",2,0.28,NA,NA,NA,NA,NA,NA,"stop","R16* D90E F167I",3
"lib2","SARS-CoV-2","TCATCATTAACTATCC",5,23.89,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","L38V A81V A89N I104T",4
"lib2","SARS-CoV-2","TCATCATTAAGATACA",7,1.61,NA,NA,NA,NA,NA,NA,"stop","G9* L122Q E141G",3
"lib2","SARS-CoV-2","TCATCATTTGTAAGTT",3,30.06,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Q84W D112L Y119P",3
"lib2","SARS-CoV-2","TCATCATTTTTGACAC",11,220.45,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","I2T I72M G152I Q176K",4
"lib2","SARS-CoV-2","TCATCCAACATAAATC",6,7.99,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13T S41L D68L G152N V173A",5
"lib2","SARS-CoV-2","TCATCCAACGAGATAA",3,4.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80G L95P T100V",3
"lib2","SARS-CoV-2","TCATCCAACGCGCCAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","S19T V32* D59M K114N H189V",5
"lib2","SARS-CoV-2","TCATCCAACTAACCCA",1,0.28,NA,NA,NA,NA,NA,NA,"stop","S147L Y175*",2
"lib2","SARS-CoV-2","TCATCCACGTAATTAG",3,0.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P C150M",2
"lib2","SARS-CoV-2","TCATCCACTTTAACTT",1,0.03,NA,NA,NA,NA,NA,NA,"stop","V37Y P169*",2
"lib2","SARS-CoV-2","TCATCCAGTCATACAA",3,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93W T100R F167E",3
"lib2","SARS-CoV-2","TCATCCATAGTTAAAA",8,2.41,NA,NA,NA,NA,NA,NA,"stop","R16H P54H E154F Y165*",4
"lib2","SARS-CoV-2","TCATCCATCAACATTT",1,56.7,10.9,0.06,0.07,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATCCCACAATTGAT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","N24T S45R K56P P96H V115* P149K",6
"lib2","SARS-CoV-2","TCATCCCAGACATTCC",2,48.17,10.7,-0.14,0.06,3,1.03,0,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","TCATCCCATTGGAACA",2,27.49,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V115I Y143D Q176S",3
"lib2","SARS-CoV-2","TCATCCCCTCCACTCA",11,258.37,10.87,0.03,0.06,2.94,1.08,0,"1 nonsynonymous","S53K",1
"lib2","SARS-CoV-2","TCATCCCGTAGTTTTG",1,13.71,10.39,-0.44,0.13,2.81,1.06,0.01,">1 nonsynonymous","A42V V115G",2
"lib2","SARS-CoV-2","TCATCCCTAATCAAGG",1,3.62,NA,NA,NA,NA,NA,NA,"stop","T55R G146*",2
"lib2","SARS-CoV-2","TCATCCCTGAACTAAC",12,101.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4R Y93G K128T I142L T170R Q176T E186D",7
"lib2","SARS-CoV-2","TCATCCCTGTGGGCCA",6,119.98,10.45,-0.39,0.05,2.94,1.03,0,"1 nonsynonymous","Y123Q",1
"lib2","SARS-CoV-2","TCATCCCTTTTATAGA",18,79.73,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S45N G83S K128L I142S T148R N151C",6
"lib2","SARS-CoV-2","TCATCCGCAACCCATT",4,68.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K48R N58E I88D",3
"lib2","SARS-CoV-2","TCATCCGGGTATTGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P L57M G83N",3
"lib2","SARS-CoV-2","TCATCCGTTTGAAGAC",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63I G86V S113T",3
"lib2","SARS-CoV-2","TCATCCTACTGCAGGT",4,89.92,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","P7L V32A C102L V181I",4
"lib2","SARS-CoV-2","TCATCCTCGAACATAC",1,6.29,8.91,-1.93,0.4,1.5,1,0.06,">1 nonsynonymous","I28E P54L N130L",3
"lib2","SARS-CoV-2","TCATCCTTTTCACTAT",7,115.91,10.75,-0.08,0.05,2.91,1.09,0,">1 nonsynonymous","A42H N120R",2
"lib2","SARS-CoV-2","TCATCGAAATCATTCT",13,195.24,10.73,-0.1,0.04,2.92,1.1,0,">1 nonsynonymous","G9H K56L",2
"lib2","SARS-CoV-2","TCATCGAATACGTGCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","TCATCGACGTACGACG",2,71.2,10.22,-0.62,0.04,2.91,1.08,0,">1 nonsynonymous","L5D E10G F62G",3
"lib2","SARS-CoV-2","TCATCGAGAACATTAA",5,6.44,NA,NA,NA,NA,NA,NA,"stop","Y93A Q168*",2
"lib2","SARS-CoV-2","TCATCGATCCGCGGCT",1,30.6,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","N30Q Y50R T100A",3
"lib2","SARS-CoV-2","TCATCGGACGTTCAGG",5,117.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","W23K G86L P177L",3
"lib2","SARS-CoV-2","TCATCGGGACAGATAA",4,46.67,9.76,-1.07,0.14,2.04,1.06,0.01,">1 nonsynonymous","T55G D137C",2
"lib2","SARS-CoV-2","TCATCGTAAAGAAGAA",3,72.9,9.18,-1.66,0.08,2.35,1.08,0,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","TCATCGTCAAAGATAC",20,94.04,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16C N40S Q84L S113F N120A T140I S200L",7
"lib2","SARS-CoV-2","TCATCTAAATATAATA",10,42.87,6.67,-4.17,0.24,1.5,1.09,0.01,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","TCATCTAATATTACAA",5,98.19,10.84,0,0.06,2.97,1.05,0,">1 nonsynonymous","S43T L60R",2
"lib2","SARS-CoV-2","TCATCTACACAAGAAC",3,24.92,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S36E N58M G172R",3
"lib2","SARS-CoV-2","TCATCTACATACCAGC",13,98.89,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N64T K87S N92R S113Q",4
"lib2","SARS-CoV-2","TCATCTACGAGCTAGT",7,50.88,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4G C31P P54D N107L",4
"lib2","SARS-CoV-2","TCATCTCAATTCCAGG",12,122.54,9.03,-1.8,0.04,2.03,1.05,0,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","TCATCTCACTTTCAAA",1,80.04,10.21,-0.62,0.03,2.77,1.02,0,">1 nonsynonymous","P7L I138H",2
"lib2","SARS-CoV-2","TCATCTCAGGAAGGTA",2,37.82,10.22,-0.62,0.09,2.73,1,0,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","TCATCTCAGTAAGAGC",1,25.66,9.68,-1.16,0.16,2.12,1.04,0.01,">1 nonsynonymous","N4L Y35K",2
"lib2","SARS-CoV-2","TCATCTCAGTATTGCA",12,69.32,10.78,-0.06,0.06,2.91,1.1,0,">1 nonsynonymous","P7K V115K",2
"lib2","SARS-CoV-2","TCATCTCCATAAGGGG",1,39.57,7.13,-3.7,0.32,1.5,1.18,0.02,">1 nonsynonymous","V20S V37L D98N W106T A190I",5
"lib2","SARS-CoV-2","TCATCTCCCAAATGGT",1,34.69,9.06,-1.77,0.27,1.54,1.05,0.03,">1 nonsynonymous","N30M N58V D90H",3
"lib2","SARS-CoV-2","TCATCTCCCGCACATA",5,69.66,8.23,-2.61,0.26,1.54,1.13,0.03,">1 nonsynonymous","Y121A G155L T201K",3
"lib2","SARS-CoV-2","TCATCTCTTTCTTACG",6,96.98,10.82,-0.02,0.04,2.96,1.06,0,"1 nonsynonymous","D59Y",1
"lib2","SARS-CoV-2","TCATCTGAGTCAAACC",3,33.69,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7L F44M D90Y N92E S129N P197C",6
"lib2","SARS-CoV-2","TCATCTGCAGTAAAGA",18,42.56,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1R F44L G86W F99H D112M T170S",6
"lib2","SARS-CoV-2","TCATCTGGAAATCAGG",6,0,NA,NA,NA,NA,NA,NA,"stop","D34R G51S Y91* P133A P149T",5
"lib2","SARS-CoV-2","TCATCTGGTGAGGCAA",1,14.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D K132P",2
"lib2","SARS-CoV-2","TCATCTTACACCTGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16T S45R N64I L122D G146P G172*",6
"lib2","SARS-CoV-2","TCATCTTCATTCTCAC",5,108.64,10.27,-0.57,0.04,2.91,1.05,0,">1 nonsynonymous","L5G S36D A42D T85N V115F T140N",6
"lib2","SARS-CoV-2","TCATCTTCCCCAAATT",11,178.09,10.79,-0.04,0.03,2.95,1.06,0,"1 nonsynonymous","V71I",1
"lib2","SARS-CoV-2","TCATCTTCCCCCACTA",2,40.03,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F47I D112W E154I T201M",4
"lib2","SARS-CoV-2","TCATCTTCGGGGACGA",12,93.32,6,-4.84,1.92,1.5,1.26,0.04,">1 nonsynonymous","P54M T85M C158T",3
"lib2","SARS-CoV-2","TCATCTTGACAAGTTT",5,34.23,10.71,-0.12,0.1,2.84,1,0,"1 nonsynonymous","V180C",1
"lib2","SARS-CoV-2","TCATCTTGAGCGACAC",9,125,9.95,-0.88,0.06,2.41,1.06,0,">1 nonsynonymous","N30V P149A",2
"lib2","SARS-CoV-2","TCATCTTTAAAAACCA",1,17.71,10.72,-0.12,0.09,2.93,1.04,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","TCATGAACCCAAACAC",4,0,NA,NA,NA,NA,NA,NA,"stop","T15L L60N L95T F126* V182D",5
"lib2","SARS-CoV-2","TCATGAACCTGCGTAA",5,0.79,NA,NA,NA,NA,NA,NA,"stop","K56* T100M R127N N157F",4
"lib2","SARS-CoV-2","TCATGAAGCGAACAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T C49W S164F",3
"lib2","SARS-CoV-2","TCATGAAGGAATAGGA",2,55.59,9.85,-0.98,0.07,2.51,1.05,0,">1 nonsynonymous","I88L K114S",2
"lib2","SARS-CoV-2","TCATGACAAAGGTATG",2,21.2,8.2,-2.63,0.31,1.63,1.14,0.05,">1 nonsynonymous","N58V W106C",2
"lib2","SARS-CoV-2","TCATGACTGGCCGGTA",3,22.44,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y93I A105R D112M",3
"lib2","SARS-CoV-2","TCATGAGAGGGGCGGC",9,16.73,NA,NA,NA,NA,NA,NA,"stop","N1W N4M R78Y R127* N157F Y178T",6
"lib2","SARS-CoV-2","TCATGAGCTCTTCCAA",3,12.87,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","I104Q G117E D137W",3
"lib2","SARS-CoV-2","TCATGATCATTGGCAT",11,183.22,10.75,-0.09,0.04,2.91,1.1,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","TCATGCACGTTTAAAC",14,257.41,10.85,0.01,0.06,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TCATGCCAGTCCAATC",6,65.11,9.46,-1.37,0.12,1.95,1.05,0.01,">1 nonsynonymous","D59Q P96T N151C",3
"lib2","SARS-CoV-2","TCATGCCCCAAGTTGA",5,51.22,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61S L122R E135S Q168M Y175L",5
"lib2","SARS-CoV-2","TCATGCCGTAGTTTGG",3,30.81,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9L T15C L60Q Y93S",4
"lib2","SARS-CoV-2","TCATGCCTCTTGCAAA",4,95.5,9.9,-0.94,0.05,2.54,1.08,0,">1 nonsynonymous","G83T D90R T201C",3
"lib2","SARS-CoV-2","TCATGCGAACACTAGA",4,15.5,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","T3S V11H V103R Y119V Y159F G166W",6
"lib2","SARS-CoV-2","TCATGCGAGTTCTAAC",3,18.5,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V11S T63N G101V",3
"lib2","SARS-CoV-2","TCATGGCTAAAGTTGC",3,11.79,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33P C49Y I142M R179G S184K",5
"lib2","SARS-CoV-2","TCATGTAACGATTAGG",8,167.94,10.53,-0.31,0.04,2.92,1.02,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","TCATGTATATGTACAA",3,14.51,6,-4.84,2,1.5,1.1,0.06,">1 nonsynonymous","R27K S41F D112S F167V",4
"lib2","SARS-CoV-2","TCATGTTGCCCAATTG",5,9.31,9.55,-1.29,0.22,2.39,1.04,0.02,"1 nonsynonymous","F8A",1
"lib2","SARS-CoV-2","TCATTAAAAACAACAA",2,45.23,7.67,-3.17,0.34,1.58,1.11,0.03,">1 nonsynonymous","K94P Y119F P197S",3
"lib2","SARS-CoV-2","TCATTAAAAATCCAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* V37A K94T G101L T148F V173S",6
"lib2","SARS-CoV-2","TCATTAAACGAAAAAC",7,102.33,6.26,-4.58,0.62,1.5,1.2,0.02,">1 nonsynonymous","T55H G86L L125N",3
"lib2","SARS-CoV-2","TCATTAAAGATAGTTC",1,5.68,9.84,-0.99,0.4,1.91,1,0.07,">1 nonsynonymous","I28M Y35E D90S V173S",4
"lib2","SARS-CoV-2","TCATTAACAAAGCTAT",2,8.81,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","C6S N58L Q84K D90T L131N P169W V173I",7
"lib2","SARS-CoV-2","TCATTAACACTAATAG",3,114.84,9.88,-0.96,0.04,2.88,1.07,0,">1 nonsynonymous","Y143W A192S",2
"lib2","SARS-CoV-2","TCATTAACCGCGATAA",1,18.22,10.36,-0.48,0.05,2.88,1.08,0,">1 nonsynonymous","L60G N110W",2
"lib2","SARS-CoV-2","TCATTAACGACAATTA",6,33.02,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C6V V11C S108I K132L Q144D V173I",6
"lib2","SARS-CoV-2","TCATTAACGAGCCGAG",2,32,9.92,-0.91,0.09,2.58,1.01,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","TCATTAACTCCACCAG",9,8.14,NA,NA,NA,NA,NA,NA,"stop","S36P T148*",2
"lib2","SARS-CoV-2","TCATTAACTTTACGGA",7,43.33,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K26G R78L Q84P F99I I104N E135T S164N",7
"lib2","SARS-CoV-2","TCATTAAGTTTCAAAT",5,66.66,9.47,-1.37,0.09,1.6,1.11,0,">1 nonsynonymous","P54V C61V E76V",3
"lib2","SARS-CoV-2","TCATTAATAATCGAGA",1,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C F160M",2
"lib2","SARS-CoV-2","TCATTAATATACCAAC",2,16.3,NA,NA,NA,NA,NA,NA,"stop","S41F T55P L122R E141D T170*",5
"lib2","SARS-CoV-2","TCATTAATCATTACAA",3,40.27,10.69,-0.15,0.02,2.98,1,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","TCATTAATGCAATTTC",2,45.3,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F8K L57G T100D A145V F167R",5
"lib2","SARS-CoV-2","TCATTAATTAATATTG",3,14.96,6.89,-3.94,0.5,1.5,1.25,0.04,">1 nonsynonymous","L95F T148R V173H E186Q",4
"lib2","SARS-CoV-2","TCATTAATTTCAACTT",6,188.86,9.76,-1.07,0.03,2.84,1.07,0,">1 nonsynonymous","I2H P7T Y39Q T46N K87H G155S",6
"lib2","SARS-CoV-2","TCATTACAAATCTACA",2,17.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L V37R A81C D90H G172N",5
"lib2","SARS-CoV-2","TCATTACAATTTCAAT",9,57.07,6,-4.84,2,3,1.21,0,">1 nonsynonymous","G86V G101L G155C",3
"lib2","SARS-CoV-2","TCATTACAGCGACAAT",4,3.17,NA,NA,NA,NA,NA,NA,"stop","S41* K132W N151S H189N",4
"lib2","SARS-CoV-2","TCATTACCAAATCTGA",3,55.27,10.89,0.05,0.03,2.89,1.11,0,">1 nonsynonymous","R16H T55V L122S",3
"lib2","SARS-CoV-2","TCATTACCCTGTTCTC",2,30.05,6.36,-4.48,0.56,1.5,1.09,0.02,">1 nonsynonymous","A14E V77E G174W",3
"lib2","SARS-CoV-2","TCATTACGATCCGAAA",1,67.45,10.12,-0.72,0.05,2.94,1.08,0,"1 nonsynonymous","Y143M",1
"lib2","SARS-CoV-2","TCATTACTCAAAATAC",1,14.95,10.54,-0.3,0.06,2.97,1.01,0,">1 nonsynonymous","F8I V153M",2
"lib2","SARS-CoV-2","TCATTACTGACAGACA",4,26.36,10.18,-0.65,0.05,2.92,1,0,">1 nonsynonymous","N4F L60K",2
"lib2","SARS-CoV-2","TCATTAGATACGCTCA",2,14.47,6.66,-4.17,0.68,3,1.02,0,">1 nonsynonymous","L95H S113H F134L Q144L F156A",5
"lib2","SARS-CoV-2","TCATTAGATCATCTTA",2,20.61,9.3,-1.54,0.11,2.41,1.08,0.01,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","TCATTAGATTATTATT",2,11.08,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G9V T15D L131Q",3
"lib2","SARS-CoV-2","TCATTAGTTAAAGCCG",5,36.75,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","V20G I72L A145V C195S",4
"lib2","SARS-CoV-2","TCATTATAACGTCAAA",3,83.29,9.37,-1.46,0.05,2.87,1.1,0,">1 nonsynonymous","S36V F156C",2
"lib2","SARS-CoV-2","TCATTATAAGTTCATA",5,49.35,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S45L T85R P133T G152V",4
"lib2","SARS-CoV-2","TCATTATACAAACACG",2,0.65,NA,NA,NA,NA,NA,NA,"stop","L5W S113N T170*",3
"lib2","SARS-CoV-2","TCATTATACAACGTTA",1,0.94,NA,NA,NA,NA,NA,NA,"stop","T85* F126Y R136L Y165V",4
"lib2","SARS-CoV-2","TCATTATACCAGGAAG",2,11.1,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y35R N92E",2
"lib2","SARS-CoV-2","TCATTATACCCACCCG",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y C49W Y143F G172S",4
"lib2","SARS-CoV-2","TCATTATACTTAGCCA",2,18,10.61,-0.23,0.11,3,1.01,0,"1 nonsynonymous","F47L",1
"lib2","SARS-CoV-2","TCATTATATTTTATTT",1,27.25,10.95,0.12,0.07,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTATTACACACGG",5,126.08,6,-4.84,0.96,1.5,1.11,0,"1 nonsynonymous","G172L",1
"lib2","SARS-CoV-2","TCATTATTTACTCGTA",4,13.43,8.78,-2.06,0.27,1.9,1.16,0.03,"1 nonsynonymous","Y119R",1
"lib2","SARS-CoV-2","TCATTATTTAGGCTAC",2,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N S19P A42Y G86R Y91S D97L",6
"lib2","SARS-CoV-2","TCATTCAAAACTTATG",8,82.45,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G9V K26R Y93N N130V",4
"lib2","SARS-CoV-2","TCATTCAAACTGGCAT",2,19.51,10.78,-0.06,0.05,2.86,1.15,0,">1 nonsynonymous","F44Y P197V",2
"lib2","SARS-CoV-2","TCATTCAAATAACTCA",2,23.34,10.44,-0.39,0.07,2.9,1.03,0,">1 nonsynonymous","N58F N120K",2
"lib2","SARS-CoV-2","TCATTCAACATACCCT",2,13.39,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C6N W23H Y121L A190L",4
"lib2","SARS-CoV-2","TCATTCAACGCGCAAT",5,0.09,NA,NA,NA,NA,NA,NA,"stop","I104T K128V I138V Y175*",4
"lib2","SARS-CoV-2","TCATTCACAACAGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W L60S L122V",3
"lib2","SARS-CoV-2","TCATTCACCCTGCATA",8,20.52,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5Q Y50C L57W C102E",4
"lib2","SARS-CoV-2","TCATTCACTATCAAGT",4,66.53,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I2T Y93T N120G",3
"lib2","SARS-CoV-2","TCATTCAGGTATATAT",1,10.04,10.02,-0.81,0.13,2.52,1,0.01,"1 nonsynonymous","C102L",1
"lib2","SARS-CoV-2","TCATTCAGTAGAAAGG",3,19.88,10.57,-0.27,0.12,2.75,1.08,0.01,">1 nonsynonymous","F44A N110R",2
"lib2","SARS-CoV-2","TCATTCATGCATTCCA",2,52.45,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S43N Q84H D90V D112W L131P P197Q",6
"lib2","SARS-CoV-2","TCATTCCAACACAACA",1,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K C61S A89F",3
"lib2","SARS-CoV-2","TCATTCCATATATATG",1,29.99,10.21,-0.62,0.06,2.94,1,0,"1 nonsynonymous","C6Y",1
"lib2","SARS-CoV-2","TCATTCCATCACTACG",5,0,NA,NA,NA,NA,NA,NA,"stop","F12A K48* V103R G174H",4
"lib2","SARS-CoV-2","TCATTCCCTGTCATTG",9,141.28,8.09,-2.75,0.12,1.5,1.13,0.01,">1 nonsynonymous","S43E N64V P133C Y178V",4
"lib2","SARS-CoV-2","TCATTCCCTTAAAGAG",3,46.27,10.9,0.07,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTCCTTAGTAAAT",8,123.38,10.83,-0.01,0.05,2.88,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTCGACTTTGTTA",5,154.16,6,-4.84,2,1.89,1.18,0,">1 nonsynonymous","T63L T85S A105T Y175G",4
"lib2","SARS-CoV-2","TCATTCGCAAAATTTT",5,34.4,6.44,-4.39,0.21,1.77,1.11,0,">1 nonsynonymous","A81L A105M C195Y",3
"lib2","SARS-CoV-2","TCATTCGCCGCACTCG",4,1.22,NA,NA,NA,NA,NA,NA,"stop","A33H G51* D97N Y119M T201E",5
"lib2","SARS-CoV-2","TCATTCGGCTCTGAGG",3,3.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T I88N G101S E135M V180K",5
"lib2","SARS-CoV-2","TCATTCTATACAGGCC",9,150.11,8.74,-2.09,0.06,2.73,1.04,0,">1 nonsynonymous","N13L Y119N T140R",3
"lib2","SARS-CoV-2","TCATTCTATCATTATT",2,0,NA,NA,NA,NA,NA,NA,"stop","A18* Y143L E154*",3
"lib2","SARS-CoV-2","TCATTCTATTGAGGAG",1,18.43,10.62,-0.22,0.09,2.86,1.11,0,">1 nonsynonymous","S45H N120I P197S",3
"lib2","SARS-CoV-2","TCATTCTCAAAAAACG",4,103.34,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y35R Y50L K56Q A105T",4
"lib2","SARS-CoV-2","TCATTCTCAGTGCTTT",1,10.1,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","A42T T63C G83Y D90F L95V Y123M T170L",7
"lib2","SARS-CoV-2","TCATTCTCCCGGTAAG",1,5.37,NA,NA,NA,NA,NA,NA,"stop","E10R V32* T148L S200A",4
"lib2","SARS-CoV-2","TCATTCTCTTGACCTA",14,2.84,NA,NA,NA,NA,NA,NA,"stop","Y91* T201R",2
"lib2","SARS-CoV-2","TCATTCTGACGTGCTT",5,7.48,6,-4.84,2,3,1.1,0,">1 nonsynonymous","T15Q G101E",2
"lib2","SARS-CoV-2","TCATTCTGGCGAACCC",6,3.42,NA,NA,NA,NA,NA,NA,"stop","P7* N13H A42V N58P G117N",5
"lib2","SARS-CoV-2","TCATTGAAAATAAGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Y A67S K94Q G152A",4
"lib2","SARS-CoV-2","TCATTGAATACGTTAG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCATTGAATTAGTCCC",4,95.28,10.86,0.03,0.09,2.85,1.06,0,"1 nonsynonymous","V153C",1
"lib2","SARS-CoV-2","TCATTGACAACTAGAA",2,32.32,8.73,-2.1,0.13,1.5,1.02,0.01,"1 nonsynonymous","R25G",1
"lib2","SARS-CoV-2","TCATTGAGTAAGGATA",1,57.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N92K L131R P149E V173I",4
"lib2","SARS-CoV-2","TCATTGATGACAGATC",3,0.71,NA,NA,NA,NA,NA,NA,"stop","F44R D59*",2
"lib2","SARS-CoV-2","TCATTGATTATTATAC",2,19.07,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","A33S G101M",2
"lib2","SARS-CoV-2","TCATTGCATGTCACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N40* G116Q G146L",3
"lib2","SARS-CoV-2","TCATTGCCCCTAAGGA",3,0.26,NA,NA,NA,NA,NA,NA,"stop","G174R T201*",2
"lib2","SARS-CoV-2","TCATTGCCGGCCCCGA",14,44.26,NA,NA,NA,NA,NA,0.16,"1 nonsynonymous","I104D",1
"lib2","SARS-CoV-2","TCATTGCTCATTAGAT",3,42.31,9.72,-1.12,0.08,2.82,1.11,0,">1 nonsynonymous","Y35S E154D",2
"lib2","SARS-CoV-2","TCATTGGAATGTAAAC",6,78.93,10.72,-0.12,0.06,2.91,1.08,0,"1 nonsynonymous","T46F",1
"lib2","SARS-CoV-2","TCATTGGCAAAATACA",3,29.38,10.62,-0.21,0.09,2.94,1.03,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TCATTGGTAGCTATTG",6,110.41,10.91,0.07,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTGGTCAATATCA",2,39.82,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51V S113A G146N F156M Y165C",5
"lib2","SARS-CoV-2","TCATTGTACTGCGACT",7,60.46,10.83,-0.01,0.06,2.84,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","TCATTGTCTATAGCTT",9,60.58,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","R25V Y178L",2
"lib2","SARS-CoV-2","TCATTGTTAACTAAAT",1,14.48,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V11C R127P F156W",3
"lib2","SARS-CoV-2","TCATTTAAAAAACTAT",12,150.7,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S69M G86F V173R A192D",4
"lib2","SARS-CoV-2","TCATTTAAAACCTCCA",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34I C61V L95W Y165L",4
"lib2","SARS-CoV-2","TCATTTAAAGATATTG",6,126.95,10.87,0.03,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTTAACAACTGCG",12,92.06,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G86L F134S N157S",3
"lib2","SARS-CoV-2","TCATTTAATCCTCACA",8,222.97,10.64,-0.2,0.03,2.96,1.03,0,"1 nonsynonymous","V180I",1
"lib2","SARS-CoV-2","TCATTTATACCCTAGC",3,92.46,10.69,-0.15,0.04,2.96,1.04,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","TCATTTATTTTTTCTG",3,6.27,6,-4.84,2,1.5,1.13,0.04,"1 nonsynonymous","V103Y",1
"lib2","SARS-CoV-2","TCATTTCAAAAATCTA",14,59.69,8.73,-2.11,0.07,1.67,1.12,0,"1 nonsynonymous","D137T",1
"lib2","SARS-CoV-2","TCATTTCAAACAACTT",3,73.3,10.35,-0.48,0.04,2.92,1.08,0,"1 nonsynonymous","F156I",1
"lib2","SARS-CoV-2","TCATTTCAAGGAGATA",6,94.83,10.9,0.07,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCATTTCACAAGCAAC",5,55.39,10.78,-0.06,0.02,2.99,1.02,0,">1 nonsynonymous","I2F R73K",2
"lib2","SARS-CoV-2","TCATTTCCAATCCGCC",1,1.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51N T140L",2
"lib2","SARS-CoV-2","TCATTTCGCTACCAAA",7,27.73,7.48,-3.35,0.26,1.5,1.23,0.02,">1 nonsynonymous","I104R N171M",2
"lib2","SARS-CoV-2","TCATTTCTAAGTATAT",12,170.48,10.61,-0.23,0.05,2.93,1.05,0,">1 nonsynonymous","L60S S147Y",2
"lib2","SARS-CoV-2","TCATTTCTATCACCCA",5,13.31,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K87S C102R",2
"lib2","SARS-CoV-2","TCATTTCTTCAAACAC",2,20.37,6,-4.84,2,3,1.04,0,">1 nonsynonymous","Y121T F167S",2
"lib2","SARS-CoV-2","TCATTTGAAGCGATAG",5,25.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1P V71I A105F K128F",4
"lib2","SARS-CoV-2","TCATTTGATATCCACT",3,11.85,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","S41A V103L S113F C158T Q168I",5
"lib2","SARS-CoV-2","TCATTTGATCTAAACC",1,9.94,10.53,-0.31,0.1,2.99,1.04,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","TCATTTGCTGGATACA",9,122.25,10.84,0,0.06,2.86,1.13,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","TCATTTGCTTGTAGCC",12,94.71,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18T R25T I88D Y119L E141A G155E",6
"lib2","SARS-CoV-2","TCATTTGGAATATAAC",11,137.18,10.67,-0.16,0.06,2.84,1.05,0,">1 nonsynonymous","T100H A105S",2
"lib2","SARS-CoV-2","TCATTTGTACCCTGAA",2,13.84,9.42,-1.41,0.19,2.25,1.14,0.01,">1 nonsynonymous","A33R F47M P149R",3
"lib2","SARS-CoV-2","TCATTTGTGTAAGTTA",1,1.21,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71L",1
"lib2","SARS-CoV-2","TCATTTTGCGTACACA",9,42.13,6,-4.84,2,3,1.14,0,">1 nonsynonymous","I72F G152L",2
"lib2","SARS-CoV-2","TCATTTTTATAAACCT",1,37.06,6.58,-4.25,0.3,2.32,1.16,0.01,">1 nonsynonymous","N24T T85A C158S",3
"lib2","SARS-CoV-2","TCCAAAAAAAAGCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2S G9* Q176V",3
"lib2","SARS-CoV-2","TCCAAAAAACGCATAA",3,25.49,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F99C Y119N",2
"lib2","SARS-CoV-2","TCCAAAAAAGGGTCAT",1,0.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15I L38V K56P P96F C150F",5
"lib2","SARS-CoV-2","TCCAAAAACAATGACA",4,50.29,10.9,0.06,0.06,2.93,1.07,0,">1 nonsynonymous","Y39L T201M",2
"lib2","SARS-CoV-2","TCCAAAAACTGGGGTT",14,121.94,10.12,-0.71,0.05,2.69,1.05,0,">1 nonsynonymous","R16V S69R N130S",3
"lib2","SARS-CoV-2","TCCAAAAAGTTCTGTA",1,27.47,9,-1.83,0.12,2.42,1.08,0.01,">1 nonsynonymous","G9I G116P P169L",3
"lib2","SARS-CoV-2","TCCAAAACAGGAAGTC",2,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42L C49F A105M",3
"lib2","SARS-CoV-2","TCCAAAACCAACATGA",3,8.47,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P7S L95C G146A",3
"lib2","SARS-CoV-2","TCCAAAAGGAATTCCC",2,112.97,10.42,-0.42,0.04,2.96,1.01,0,">1 nonsynonymous","S36R E186R",2
"lib2","SARS-CoV-2","TCCAAAAGTGCTTTCC",4,44.08,10.87,0.03,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAAAATAACAAGTA",5,34.9,7.52,-3.32,0.23,1.5,1.06,0.01,">1 nonsynonymous","S43A A81E K94V G174L",4
"lib2","SARS-CoV-2","TCCAAAATAAGTACAC",2,35.4,10.1,-0.73,0.05,2.96,1.02,0,">1 nonsynonymous","T140R P149T F156T",3
"lib2","SARS-CoV-2","TCCAAAATGAAGTTAA",4,12.86,9.75,-1.09,0.14,2.66,1.04,0.01,">1 nonsynonymous","L5A R73P S113A K128S",4
"lib2","SARS-CoV-2","TCCAAAATTCAACAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","G174*",1
"lib2","SARS-CoV-2","TCCAAACATGGAAAGT",4,18.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H C150T V173F V182F L188V",5
"lib2","SARS-CoV-2","TCCAAACATGTTATTT",5,58.99,10.84,0,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAAACCTGCGGGCC",4,19.54,9.36,-1.48,0.32,1.5,1,0.06,">1 nonsynonymous","L122Y K128I V173T",3
"lib2","SARS-CoV-2","TCCAAACGCTAGTGTC",7,44.21,8.35,-2.49,0.18,1.5,1.1,0.02,">1 nonsynonymous","S19T A33L K56P",3
"lib2","SARS-CoV-2","TCCAAACGGGATTGAT",4,11.13,6.22,-4.62,0.58,2.31,1.23,0.01,">1 nonsynonymous","T85K L95A",2
"lib2","SARS-CoV-2","TCCAAACGTGAGCCAT",10,107.93,10.63,-0.21,0.02,2.96,1.03,0,"1 nonsynonymous","T15N",1
"lib2","SARS-CoV-2","TCCAAACTGCACCAAA",1,13.67,10.39,-0.45,0.11,2.88,1.14,0,"1 nonsynonymous","L183F",1
"lib2","SARS-CoV-2","TCCAAACTTGATGTGA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q T15A W23F P169Y",4
"lib2","SARS-CoV-2","TCCAAAGAAATAATAA",1,38.49,10.49,-0.34,0.04,2.95,1.07,0,">1 nonsynonymous","A81E N110V S200D",3
"lib2","SARS-CoV-2","TCCAAAGAATTACTAC",12,313.09,9.87,-0.96,0.03,2.83,1.04,0,">1 nonsynonymous","K128S G146A P169Y",3
"lib2","SARS-CoV-2","TCCAAAGACTCCTTCT",8,142.76,8.75,-2.08,0.06,2.75,1.05,0,">1 nonsynonymous","L5P V37P G116L K128Q Q168I",5
"lib2","SARS-CoV-2","TCCAAAGCCATACCGC",1,23.71,9.88,-0.96,0.1,2.53,1,0.01,">1 nonsynonymous","C6M N13K A42E",3
"lib2","SARS-CoV-2","TCCAAAGCTCACTCAC",13,101.4,7.97,-2.87,0.17,1.75,1.1,0.01,">1 nonsynonymous","A105S Y143R",2
"lib2","SARS-CoV-2","TCCAAAGGTGAATATG",6,125.32,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C6V I72M I80H R127L N157I",5
"lib2","SARS-CoV-2","TCCAAAGTATATCACT",7,106.19,10.71,-0.13,0.03,2.97,1.05,0,">1 nonsynonymous","P149C K199S",2
"lib2","SARS-CoV-2","TCCAAAGTCTGATTCA",4,76.71,10.77,-0.06,0.03,3,1.02,0,">1 nonsynonymous","Y39T I104V",2
"lib2","SARS-CoV-2","TCCAAAGTGTGGGACG",4,195.07,9.9,-0.94,0.04,2.93,1.04,0,">1 nonsynonymous","R73S S147T",2
"lib2","SARS-CoV-2","TCCAAAGTTCTCCCGA",9,202.89,8.77,-2.07,0.05,2.94,1.06,0,">1 nonsynonymous","G166Y P191T",2
"lib2","SARS-CoV-2","TCCAAATAACCGCTAT",6,46.04,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","K87S K114Q R124K A145W L188R",5
"lib2","SARS-CoV-2","TCCAAATAATCGGTTA",5,6.22,9.81,-1.02,0.26,2.14,1.09,0.02,">1 nonsynonymous","F8A A42H I142M",3
"lib2","SARS-CoV-2","TCCAAATACGATGAAT",8,46.78,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L111H F134C R179A",3
"lib2","SARS-CoV-2","TCCAAATATCAAATAT",2,56.56,10.46,-0.38,0.07,2.79,1.06,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","TCCAAATCGATATTGC",4,37.77,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D137L G146W",2
"lib2","SARS-CoV-2","TCCAAATCTTAACTCC",8,0.19,NA,NA,NA,NA,NA,NA,"stop","I2L I80* P133* E154D",4
"lib2","SARS-CoV-2","TCCAAATGAACCATCT",8,24.63,8.1,-2.74,0.18,1.5,1.12,0.01,">1 nonsynonymous","F8C F17L G196K",3
"lib2","SARS-CoV-2","TCCAAATGAGAACAAA",10,299.42,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","T55F P177Y",2
"lib2","SARS-CoV-2","TCCAAATGATACTCAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y Y123L A190F",3
"lib2","SARS-CoV-2","TCCAAATGCAGAAAAC",1,0.71,NA,NA,NA,NA,NA,NA,"stop","N1V S53R C61F N107S C150*",5
"lib2","SARS-CoV-2","TCCAAATTGGTTTAAA",1,12.74,10.09,-0.75,0.13,2.66,1,0.01,"1 nonsynonymous","A14Y",1
"lib2","SARS-CoV-2","TCCAAATTGTAGATTA",14,87.64,8.14,-2.69,0.1,1.97,1.08,0,"1 nonsynonymous","D112Y",1
"lib2","SARS-CoV-2","TCCAAATTTTATAGTT",6,2.13,NA,NA,NA,NA,NA,NA,"stop","N4S V37*",2
"lib2","SARS-CoV-2","TCCAACAAAAACGTGC",1,71.08,10.22,-0.61,0.04,2.9,1.06,0,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","TCCAACAAAGGTCCCC",14,2.83,NA,NA,NA,NA,NA,NA,"stop","D68L D98L Y121* T148C",4
"lib2","SARS-CoV-2","TCCAACAAAGTTAAAC",1,8.64,6,-4.84,1.62,2.07,1.05,0,">1 nonsynonymous","V11L K87P K94P P149L",4
"lib2","SARS-CoV-2","TCCAACAACCGACGGA",4,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E F99S T170S L183P",4
"lib2","SARS-CoV-2","TCCAACACAATCTGAT",2,36.3,10.9,0.07,0.09,2.98,1.04,0,"1 nonsynonymous","D97E",1
"lib2","SARS-CoV-2","TCCAACACAATTCGAA",1,20.31,8.89,-1.95,0.08,2.79,1.16,0,">1 nonsynonymous","V32G E154Y",2
"lib2","SARS-CoV-2","TCCAACACAGTTGACA",3,35.19,8.57,-2.26,0.33,1.5,1,0.06,">1 nonsynonymous","V37G K56I Y66L E76V",4
"lib2","SARS-CoV-2","TCCAACACCGGTCGCT",8,173.03,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V37M G83M T100I A105P Y143K Q176H",6
"lib2","SARS-CoV-2","TCCAACACCGTGCCGA",6,139.89,10.7,-0.14,0.03,2.95,1.04,0,">1 nonsynonymous","A42V N64T",2
"lib2","SARS-CoV-2","TCCAACAGCGAGAAAT",7,99.08,10.46,-0.38,0.06,2.89,1.04,0,"1 nonsynonymous","N24Y",1
"lib2","SARS-CoV-2","TCCAACAGGCTGCCCA",7,90.07,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F44H V65K N107S D137Y",4
"lib2","SARS-CoV-2","TCCAACAGTTGAATTA",7,34.26,11.08,0.25,0.05,2.98,1.03,0,">1 nonsynonymous","L60A Q168H",2
"lib2","SARS-CoV-2","TCCAACATAAAACTTT",1,19.38,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N24K C49V L60F A145R C195Y",5
"lib2","SARS-CoV-2","TCCAACATCAATATTA",1,19.91,6,-4.84,2,3,1.06,0,">1 nonsynonymous","C6M A18L Q79Y K94N",4
"lib2","SARS-CoV-2","TCCAACATCCATAACG",9,204.85,9.19,-1.64,0.06,2.9,1.07,0,">1 nonsynonymous","F47V Y119T",2
"lib2","SARS-CoV-2","TCCAACATTAACTGGC",6,91.73,6.74,-4.09,0.15,1.5,1.07,0,">1 nonsynonymous","D90Q N130S Y143D Q168A",4
"lib2","SARS-CoV-2","TCCAACATTTAAATAT",15,155.83,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6L P7T T55S D137A A145S",5
"lib2","SARS-CoV-2","TCCAACCAAATATAAT",2,153.28,10.71,-0.13,0.02,2.94,1.04,0,"1 nonsynonymous","V153W",1
"lib2","SARS-CoV-2","TCCAACCGATGTTTCA",4,20.93,6.17,-4.66,1.22,1.5,1.34,0.04,">1 nonsynonymous","C102W I142F",2
"lib2","SARS-CoV-2","TCCAACCGCAGTAAAT",1,52.91,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","G83N Y93K",2
"lib2","SARS-CoV-2","TCCAACCTAAACTATT",4,52.09,10.73,-0.11,0.06,2.94,1.05,0,">1 nonsynonymous","N4F P197V",2
"lib2","SARS-CoV-2","TCCAACCTCACCGAAA",2,7.28,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","T3S F12L Y93L V153F C158T T170F",6
"lib2","SARS-CoV-2","TCCAACCTGCTTAAAC",4,33.58,7.1,-3.73,0.4,1.5,1,0.05,">1 nonsynonymous","I2V Q84N D90A Q144L P149L",5
"lib2","SARS-CoV-2","TCCAACGCGACCATTC",2,50.09,9.83,-1.01,0.06,2.7,1.05,0,">1 nonsynonymous","N1V N64K N151W G174S",4
"lib2","SARS-CoV-2","TCCAACGCGCACTATG",11,88.83,10.78,-0.06,0.02,3,1.01,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","TCCAACGCTAAGCTTT",2,47.31,10.16,-0.67,0.06,2.8,1.22,0,">1 nonsynonymous","P54L N120G G166A",3
"lib2","SARS-CoV-2","TCCAACGGTCCAGACA",8,134.31,10.82,-0.01,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAACGTGGGAATAC",12,81.7,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","L60P V173L R179N",3
"lib2","SARS-CoV-2","TCCAACTAAAGCGATT",1,30.68,9.8,-1.03,0.09,1.99,1.07,0,">1 nonsynonymous","L38S D59Q",2
"lib2","SARS-CoV-2","TCCAACTAAGTTTCCA",3,102.98,10.79,-0.05,0.03,2.92,1.07,0,"1 nonsynonymous","K26L",1
"lib2","SARS-CoV-2","TCCAACTAGCCTTATA",3,19.26,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N64I V103L S147R T170K",4
"lib2","SARS-CoV-2","TCCAACTAGGTATAGC",1,6.96,10.87,0.04,0.05,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCAACTGCAACACTG",5,118.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A89G F167L",2
"lib2","SARS-CoV-2","TCCAACTGGTGTAGCC",5,50.79,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","L5T R27K Q84N C150R",4
"lib2","SARS-CoV-2","TCCAACTTATGTGACA",10,106.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D68G P82Q F99V Y119D N151T",5
"lib2","SARS-CoV-2","TCCAACTTGAAACTCC",11,58.04,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25S N107Y P133Q T201F",4
"lib2","SARS-CoV-2","TCCAAGAAACTTAACA",1,9.59,8.77,-2.07,0.33,1.81,1.06,0.05,"1 nonsynonymous","G86M",1
"lib2","SARS-CoV-2","TCCAAGAAATGCTCAT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","Y39L G83P N92G N120L P161L T201*",6
"lib2","SARS-CoV-2","TCCAAGAATATGCGAT",5,29.28,6.01,-4.83,0.84,1.5,1.09,0.01,">1 nonsynonymous","F12Q R179L",2
"lib2","SARS-CoV-2","TCCAAGAATCACATTA",3,7.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P82Y",2
"lib2","SARS-CoV-2","TCCAAGAATCCCTAAC",7,85.56,10.83,-0.01,0.05,2.91,1.11,0,"1 nonsynonymous","V32T",1
"lib2","SARS-CoV-2","TCCAAGACAATCAGTG",5,3.7,NA,NA,NA,NA,NA,NA,"stop","C6E R16Y S69* P177M",4
"lib2","SARS-CoV-2","TCCAAGACCAAATAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","L5T D34N D59L G155* F167P P197V",6
"lib2","SARS-CoV-2","TCCAAGACCCACACCT",5,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S G86N F99P",3
"lib2","SARS-CoV-2","TCCAAGACGAAGATTA",2,4.29,NA,NA,NA,NA,NA,NA,"stop","L5* R73P G146K T201S",4
"lib2","SARS-CoV-2","TCCAAGAGAAATCGAT",4,246.06,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4L T55S N64T G83V I88N",5
"lib2","SARS-CoV-2","TCCAAGATATACGGAG",3,22.22,8.34,-2.49,0.38,1.5,1.05,0.04,">1 nonsynonymous","W106A S164I",2
"lib2","SARS-CoV-2","TCCAAGATTTGAATGC",2,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V T85W E141L P161Y",4
"lib2","SARS-CoV-2","TCCAAGCAAATGTGCA",5,59.47,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A22Q K48L K87T K94E",4
"lib2","SARS-CoV-2","TCCAAGCATATGACCG",3,28.13,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","Y39M V103K",2
"lib2","SARS-CoV-2","TCCAAGCCGCCCTTAG",6,106.76,10.74,-0.09,0.07,2.85,1.09,0,"1 nonsynonymous","L122R",1
"lib2","SARS-CoV-2","TCCAAGCTCACTGTGG",3,14.32,9.48,-1.35,0.13,2.56,1.03,0.01,">1 nonsynonymous","C6A A89S",2
"lib2","SARS-CoV-2","TCCAAGCTTCAAATAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","TCCAAGGAATATGTTC",6,21.83,6.12,-4.72,1.57,1.5,1.4,0.04,">1 nonsynonymous","Y93L T100M S147M",3
"lib2","SARS-CoV-2","TCCAAGGCCAGACCTT",7,56.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2V A67G Y121L Y143L F156Q",5
"lib2","SARS-CoV-2","TCCAAGGGTAAATCTA",1,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L D98E",2
"lib2","SARS-CoV-2","TCCAAGTAACCCACAC",3,19.07,10.28,-0.56,0.09,2.95,1.09,0,">1 nonsynonymous","C6Y S43R",2
"lib2","SARS-CoV-2","TCCAAGTCCCACCCCA",6,144.29,10.22,-0.61,0.05,2.88,1.09,0,">1 nonsynonymous","V37F Q168T",2
"lib2","SARS-CoV-2","TCCAAGTGGCAGGAGG",2,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I R179L",2
"lib2","SARS-CoV-2","TCCAAGTTAGAATCTG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60Y Q79P",2
"lib2","SARS-CoV-2","TCCAATAAAACCGTCA",12,1.52,NA,NA,NA,NA,NA,NA,"stop","T3A G9* S19T F134C",4
"lib2","SARS-CoV-2","TCCAATAACATCCAGC",2,4.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93V F134L",2
"lib2","SARS-CoV-2","TCCAATAACTTCAAAT",6,97.37,10.82,-0.01,0.05,2.89,1.12,0,"1 nonsynonymous","K48N",1
"lib2","SARS-CoV-2","TCCAATAATAAGATAA",2,3.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L A33M F99D",3
"lib2","SARS-CoV-2","TCCAATACAACAAGTC",5,56.47,10.79,-0.05,0.04,2.92,1.1,0,"1 nonsynonymous","L60Q",1
"lib2","SARS-CoV-2","TCCAATACATTACGAT",3,41.69,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y21E P54S G152T S184N",4
"lib2","SARS-CoV-2","TCCAATACCACATACA",5,53.36,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F62E S69E C150H Q176T",4
"lib2","SARS-CoV-2","TCCAATAGCTTGAAAC",1,23.85,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44D S113D E141A G174Q",4
"lib2","SARS-CoV-2","TCCAATAGTAAATCTA",3,0,NA,NA,NA,NA,NA,NA,"stop","S45N D97* F167H",3
"lib2","SARS-CoV-2","TCCAATATAACATACC",2,9.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F99S C150S G174Q",3
"lib2","SARS-CoV-2","TCCAATATACAATTCT",7,0.89,NA,NA,NA,NA,NA,NA,"stop","I2* V37H",2
"lib2","SARS-CoV-2","TCCAATCAAAGCTCGT",2,121.32,7.57,-3.27,0.15,1.5,1.1,0.01,">1 nonsynonymous","T85I Q176V",2
"lib2","SARS-CoV-2","TCCAATCATGCTAGAA",13,70.36,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G9S F17W C61S F70T D97A T148R F167W",7
"lib2","SARS-CoV-2","TCCAATCATTCGATAC",1,0.06,NA,NA,NA,NA,NA,NA,"stop","K26V S53W D97W Y119*",4
"lib2","SARS-CoV-2","TCCAATCCAAACCCGG",5,59.97,10.86,0.02,0.06,2.83,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAATCCATGCAGAA",6,14.13,6,-4.84,2,3,1.25,0.01,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","TCCAATCGATAGCCGT",3,9.17,7.51,-3.32,0.4,1.5,1.06,0.04,">1 nonsynonymous","E10V A89M",2
"lib2","SARS-CoV-2","TCCAATCTATTAACCT",13,132.32,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D90M C150K",2
"lib2","SARS-CoV-2","TCCAATCTCATATAGA",4,1.31,NA,NA,NA,NA,NA,NA,"stop","R27W D98K S113* Y123C S129M",5
"lib2","SARS-CoV-2","TCCAATCTTCTAAATA",1,1.98,NA,NA,NA,NA,NA,NA,"stop","T3* Y66R A89P A190S T201P",5
"lib2","SARS-CoV-2","TCCAATGCCCGTTTTA",4,17.03,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","N4Q K94S F99P",3
"lib2","SARS-CoV-2","TCCAATGGAGCATAAC",8,43.13,9.41,-1.43,0.04,2.92,1.06,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","TCCAATGTTCTAAACA",3,74.26,10.72,-0.12,0.06,2.91,1.09,0,">1 nonsynonymous","E141N P149V",2
"lib2","SARS-CoV-2","TCCAATTAGACTACTT",11,75.45,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y39G A105P",2
"lib2","SARS-CoV-2","TCCAATTGTAGCAGGC",3,0.48,NA,NA,NA,NA,NA,NA,"stop","C6L T100* G152V",3
"lib2","SARS-CoV-2","TCCAATTTAAATAAAA",10,45.42,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14C C61S I88S G101L E135R Q144P",6
"lib2","SARS-CoV-2","TCCAATTTATACTGTG",9,29.49,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N64S D98H G101I K114R R136L",5
"lib2","SARS-CoV-2","TCCAATTTCACACTAA",6,52.19,6,-4.84,2,3,1.19,0,">1 nonsynonymous","S41P G51A Y91P N151T",4
"lib2","SARS-CoV-2","TCCAATTTCAGCTAAA",4,26.21,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","F8L S45M P82V W106N",4
"lib2","SARS-CoV-2","TCCAATTTGGGTGTGG",4,6.9,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N4I G9A D59L G101D P149R T170I",6
"lib2","SARS-CoV-2","TCCACAAAATCCAAGC",2,0.04,NA,NA,NA,NA,NA,NA,"stop","V37* R78P P133R P149Q A190V T201L",6
"lib2","SARS-CoV-2","TCCACAAAATTCAGGG",6,1.74,NA,NA,NA,NA,NA,NA,"stop","A33F P54* N120V F160N",4
"lib2","SARS-CoV-2","TCCACAAACTAACCCT",6,149.79,10.3,-0.53,0.03,2.91,1.05,0,"1 nonsynonymous","L57A",1
"lib2","SARS-CoV-2","TCCACAAATAACCGCT",9,237.91,10.63,-0.21,0.02,2.94,1.04,0,">1 nonsynonymous","E141Y S147H",2
"lib2","SARS-CoV-2","TCCACAACACGTGCAT",2,39.73,10.67,-0.17,0.08,2.93,1.09,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","TCCACAACTCCGCCTA",6,13.89,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F62N I104R",2
"lib2","SARS-CoV-2","TCCACAATTAAACCCA",3,8.28,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","L5K N107V R127N E154S L183A",5
"lib2","SARS-CoV-2","TCCACACAACAGCCTA",3,48.51,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31D K56T F126Y Y143E K199P",5
"lib2","SARS-CoV-2","TCCACACAACCCCAAT",4,16.39,7.91,-2.93,0.33,1.63,1.16,0.04,"1 nonsynonymous","D137L",1
"lib2","SARS-CoV-2","TCCACACAAGCCCTCG",3,40.15,8.75,-2.08,0.11,2.76,1.08,0,">1 nonsynonymous","V71I K87L I104Y G146T",4
"lib2","SARS-CoV-2","TCCACACAGACCAGGA",5,17.03,6,-4.84,1.77,2.36,1.09,0,">1 nonsynonymous","A14F L57V K94V N171K",4
"lib2","SARS-CoV-2","TCCACACCCTACCAAA",2,23.88,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A67S T85E P96L V103L V182Y",5
"lib2","SARS-CoV-2","TCCACACCGTCTGCAA",5,12.06,10.49,-0.34,0.23,2.64,1,0.02,">1 nonsynonymous","A42S K128T",2
"lib2","SARS-CoV-2","TCCACACCTCAACACT",1,6.31,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","E10V N30V F62T G83T V103G E154Y",6
"lib2","SARS-CoV-2","TCCACACTAAGATCTA",2,0.97,NA,NA,NA,NA,NA,NA,"stop","W23L L57Q I142* P149L",4
"lib2","SARS-CoV-2","TCCACACTAGCCCCCT",4,27.09,10.24,-0.59,0.06,3,1.02,0,">1 nonsynonymous","A42P T55L Q144P G152N P197G",5
"lib2","SARS-CoV-2","TCCACAGAAGTGAGTG",5,79.75,10.03,-0.8,0.1,2.26,1.01,0,">1 nonsynonymous","N4L N58I S184V",3
"lib2","SARS-CoV-2","TCCACAGCTATCATTA",5,37.77,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","I2T V77P T85M",3
"lib2","SARS-CoV-2","TCCACATAACTTTCTT",12,813.47,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A42T G146W Y175K T201S",4
"lib2","SARS-CoV-2","TCCACATACAAATCCC",2,3.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S N110I",2
"lib2","SARS-CoV-2","TCCACATATGGTACTA",4,57.1,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","N24V A42Y G74V S113P R136L G174F",6
"lib2","SARS-CoV-2","TCCACATGGAAAACTA",9,59.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44H F70E S129R",3
"lib2","SARS-CoV-2","TCCACATGTGATACCC",10,6.18,NA,NA,NA,NA,NA,NA,"stop","N13W A33M T46L G116* S139R Y178Q",6
"lib2","SARS-CoV-2","TCCACCAAAATACAAA",12,193.51,10.74,-0.1,0.03,2.96,1.06,0,"1 nonsynonymous","Y35V",1
"lib2","SARS-CoV-2","TCCACCAAACAGAATG",3,88.76,6,-4.84,1.1,1.5,1.1,0.01,">1 nonsynonymous","V11F Y35K T85S Y165G",4
"lib2","SARS-CoV-2","TCCACCAAGCATTCAA",6,61.7,8.06,-2.78,0.17,2.59,1.07,0.01,">1 nonsynonymous","G9N C158S",2
"lib2","SARS-CoV-2","TCCACCAATGTCTGGA",9,113.28,9.19,-1.64,0.04,2.89,1.08,0,">1 nonsynonymous","A81G Y119P",2
"lib2","SARS-CoV-2","TCCACCACGGTAACCA",1,37.62,10.17,-0.66,0.07,2.73,1,0,">1 nonsynonymous","D34T I104M S129R",3
"lib2","SARS-CoV-2","TCCACCACTAGACGGG",10,108.9,9.77,-1.06,0.07,2.19,1.05,0,">1 nonsynonymous","V52L Y91Q",2
"lib2","SARS-CoV-2","TCCACCAGAGAACGAA",2,96.44,10.15,-0.69,0.04,2.9,1.1,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","TCCACCAGCCGGACTA",1,7.98,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K87F D112R L122S H189Q",4
"lib2","SARS-CoV-2","TCCACCAGTTCCTATG",3,14.75,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C6H G86Y S129C",3
"lib2","SARS-CoV-2","TCCACCATAAAGTACG",6,42.11,10.92,0.08,0.14,2.53,1.04,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TCCACCATGGCCATAG",1,2.8,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCCACCATTTTATTTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52T D59W K87M V103N",4
"lib2","SARS-CoV-2","TCCACCCCAACTTCTG",6,88.52,7.32,-3.51,0.15,1.5,1.06,0.01,">1 nonsynonymous","D75T Q176L T201M",3
"lib2","SARS-CoV-2","TCCACCCCTGTTTACG",10,189.38,10.74,-0.09,0.05,2.9,1.11,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TCCACCCGTTTTAAAC",2,21.39,10.69,-0.15,0.07,2.86,1.13,0,"1 nonsynonymous","D98T",1
"lib2","SARS-CoV-2","TCCACCCTAACCACCC",5,22.35,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V11I K87G W106R C158N",4
"lib2","SARS-CoV-2","TCCACCCTTTGAAGGG",3,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D V77L G174R",3
"lib2","SARS-CoV-2","TCCACCGCGTGTATTG",5,36.94,6.09,-4.75,0.64,1.5,1.15,0.01,">1 nonsynonymous","A42L S129I Y143K",3
"lib2","SARS-CoV-2","TCCACCGCTCCAAAAC",5,1.98,NA,NA,NA,NA,NA,NA,"stop","V37T K114* Y121S",3
"lib2","SARS-CoV-2","TCCACCGGTATGGTTT",3,39.39,10.66,-0.18,0.07,2.96,1.07,0,">1 nonsynonymous","R27S T201Q",2
"lib2","SARS-CoV-2","TCCACCTACATACACC",1,51.62,10.09,-0.74,0.06,2.95,1.07,0,">1 nonsynonymous","L122Q P177S K199S",3
"lib2","SARS-CoV-2","TCCACCTGTCAGAAAT",2,35.62,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y66V L95T D98V A105K",4
"lib2","SARS-CoV-2","TCCACGAACAAAATAT",6,102.88,10.76,-0.08,0.03,2.98,1.03,0,"1 nonsynonymous","S43V",1
"lib2","SARS-CoV-2","TCCACGAACCAAACCA",8,32.14,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y119T L131S S147Y",3
"lib2","SARS-CoV-2","TCCACGAACGAACAAA",2,2.38,NA,NA,NA,NA,NA,NA,"stop","A14P Y35A F156* P197R",4
"lib2","SARS-CoV-2","TCCACGAAGCGACATT",10,78.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4I V52I G101M N107F Y159V T170N",6
"lib2","SARS-CoV-2","TCCACGAATGGTCAAC",2,100.59,10.74,-0.1,0.03,2.92,1.1,0,"1 nonsynonymous","V153C",1
"lib2","SARS-CoV-2","TCCACGAGAGAGTAAT",3,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V71W E76A L95D A105K V173D",5
"lib2","SARS-CoV-2","TCCACGATGTCTCGTA",3,47.95,9.27,-1.57,0.05,2.92,1.04,0,">1 nonsynonymous","K56T Y119M",2
"lib2","SARS-CoV-2","TCCACGCAATGACTCC",11,119.54,9.6,-1.24,0.03,2.92,1.03,0,">1 nonsynonymous","I2R N171L",2
"lib2","SARS-CoV-2","TCCACGCATAAGTGAC",11,42.41,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y21R Y121G",2
"lib2","SARS-CoV-2","TCCACGCGCAACCGAA",16,2.04,NA,NA,NA,NA,NA,NA,"stop","G9L S36N G74L D90* Y119M",5
"lib2","SARS-CoV-2","TCCACGGTAACGAATT",5,48.35,10.24,-0.6,0.05,2.91,1.13,0,">1 nonsynonymous","T15N K87T",2
"lib2","SARS-CoV-2","TCCACGTACTTAAAAC",3,16.38,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","L5S L95P",2
"lib2","SARS-CoV-2","TCCACGTTAACAAAAG",3,33.94,6,-4.84,2,3,1.1,0,">1 nonsynonymous","F12C T46D K56Q D68K Y165S T201N",6
"lib2","SARS-CoV-2","TCCACGTTATGTCCGG",7,1.27,NA,NA,NA,NA,NA,NA,"stop","C31K S41* N109P T170K",4
"lib2","SARS-CoV-2","TCCACGTTTAGCCAAA",6,34.24,10.39,-0.45,0.08,2.98,1,0,">1 nonsynonymous","E10V K87I",2
"lib2","SARS-CoV-2","TCCACTAACAGAGATA",7,67.64,8.69,-2.15,0.12,1.54,1.08,0.01,">1 nonsynonymous","D68T E154V",2
"lib2","SARS-CoV-2","TCCACTAACAGTAATA",6,119.45,10.86,0.02,0.05,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCACTAACTTTTTAT",1,16.12,6.78,-4.06,0.6,1.5,1.25,0.05,">1 nonsynonymous","A105Y F126L A145R",3
"lib2","SARS-CoV-2","TCCACTACATAAATCT",4,153.12,10.79,-0.05,0.06,2.94,1.08,0,"1 nonsynonymous","K199N",1
"lib2","SARS-CoV-2","TCCACTACCCCACTGC",7,325.87,10.83,0,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCACTAGAAAATGCA",3,25.45,8.87,-1.96,0.16,2.1,1.1,0.01,">1 nonsynonymous","S19E T55Y N151D",3
"lib2","SARS-CoV-2","TCCACTATTTACCCCT",7,178.16,10.64,-0.19,0.05,2.95,1.06,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","TCCACTCAACATTTTT",2,29.03,8.45,-2.38,0.14,2.84,1.15,0.01,"1 nonsynonymous","T170I",1
"lib2","SARS-CoV-2","TCCACTCACGTCAACA",3,0.7,NA,NA,NA,NA,NA,NA,"stop","A89* L162*",2
"lib2","SARS-CoV-2","TCCACTCAGCGTTTCC",1,19.11,10.19,-0.65,0.3,1.85,1,0.04,">1 nonsynonymous","P133R P149A L162V",3
"lib2","SARS-CoV-2","TCCACTCCGGTCCAGG",4,8.29,6,-4.84,2,1.5,1.33,0.03,">1 nonsynonymous","T15E N40M I72R N107I T201P",5
"lib2","SARS-CoV-2","TCCACTCTACACACAT",1,20.47,6,-4.84,2,1.5,1.34,0.07,">1 nonsynonymous","S69R L183C S200D",3
"lib2","SARS-CoV-2","TCCACTGACGACTACA",3,109.63,10.81,-0.03,0.04,2.96,1.06,0,"1 nonsynonymous","N58D",1
"lib2","SARS-CoV-2","TCCACTGAGTGGCGCG",10,112.15,10.69,-0.15,0.02,2.94,1.06,0,"1 nonsynonymous","F47M",1
"lib2","SARS-CoV-2","TCCACTTAAGAATCGA",7,136.84,10.57,-0.27,0.03,2.94,1.07,0,">1 nonsynonymous","S113A P149I",2
"lib2","SARS-CoV-2","TCCACTTACACAAATT",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44K F62Q Y91R",3
"lib2","SARS-CoV-2","TCCACTTATCCGCTAA",8,85.65,6,-4.84,1.67,1.5,1.19,0.02,">1 nonsynonymous","L38R N64G D90Y P149W",4
"lib2","SARS-CoV-2","TCCACTTTACGCCATA",1,19.21,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","N13Y R127F C150S Y178A S200P",5
"lib2","SARS-CoV-2","TCCACTTTAGATCCCA",18,302.25,10.78,-0.05,0.02,2.97,1.04,0,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","TCCAGAAAAAGAGTAG",2,30.46,9.38,-1.45,0.1,2.65,1.01,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","TCCAGACACATTGAAT",4,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19E N58T D90G D98S Y121F Q144G Y165V",7
"lib2","SARS-CoV-2","TCCAGACAGGGGACAG",2,57.01,10.74,-0.1,0.06,2.9,1.11,0,">1 nonsynonymous","N64A A192T",2
"lib2","SARS-CoV-2","TCCAGACCACAAAACC",1,13.33,6,-4.84,0.97,3,1.1,0.01,">1 nonsynonymous","A89L N107A",2
"lib2","SARS-CoV-2","TCCAGACCCAGCACCC",4,50.19,10.25,-0.59,0.13,2.17,1,0.01,">1 nonsynonymous","D97Y Y123L V173Y",3
"lib2","SARS-CoV-2","TCCAGACCCGGTAAGG",5,24.76,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A14S S69R N110L Y165W R179S",5
"lib2","SARS-CoV-2","TCCAGACTAGCTTTTC",4,74.85,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N58S N109R L131G P161V Q176H",5
"lib2","SARS-CoV-2","TCCAGAGACAGAATCA",6,1.91,NA,NA,NA,NA,NA,NA,"stop","G9K Y91K A105D Q144A P149* Y159R",6
"lib2","SARS-CoV-2","TCCAGAGACCAATAAC",6,81.78,10.87,0.03,0.03,2.95,1.06,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","TCCAGAGATACAAGAT",4,157.51,9.46,-1.38,0.05,1.95,1.05,0,">1 nonsynonymous","E10R T100A Y178W",3
"lib2","SARS-CoV-2","TCCAGAGCATCAAATC",3,21.22,10.77,-0.07,0.06,2.94,1,0,">1 nonsynonymous","V77I I142L",2
"lib2","SARS-CoV-2","TCCAGAGGAATAGCCA",11,289.78,10.05,-0.79,0.08,2.39,1.02,0,">1 nonsynonymous","N24L L60V",2
"lib2","SARS-CoV-2","TCCAGAGGTGGACACG",5,86.45,10.75,-0.08,0.06,2.94,1.08,0,"1 nonsynonymous","N64R",1
"lib2","SARS-CoV-2","TCCAGAGGTGTACGCA",9,36.66,6,-4.84,2,1.5,1.36,0.06,">1 nonsynonymous","C6W F17L K48P N107P P191C",5
"lib2","SARS-CoV-2","TCCAGATATCTTAATA",8,82.63,10.83,-0.01,0.07,2.87,1.13,0,"1 nonsynonymous","L188Q",1
"lib2","SARS-CoV-2","TCCAGATATTTATGCA",4,5.81,6.08,-4.76,2,1.5,1.21,0.03,">1 nonsynonymous","V37G A89K I104K Y175R",4
"lib2","SARS-CoV-2","TCCAGATGAAAGTGAG",8,161.55,8.61,-2.23,0.07,2.9,1.09,0,"1 nonsynonymous","Y159Q",1
"lib2","SARS-CoV-2","TCCAGATGACCACGTA",1,26.05,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N40T K94P I142G A192V",4
"lib2","SARS-CoV-2","TCCAGATTACGTTATT",6,177.05,10.88,0.04,0.06,2.8,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAGATTTTCCCGAA",10,113.08,7.5,-3.34,0.24,1.58,1.24,0.02,">1 nonsynonymous","C150I T201G",2
"lib2","SARS-CoV-2","TCCAGCAAAATCCATA",3,39.63,10.1,-0.74,0.07,2.91,1.03,0,"1 nonsynonymous","I142A",1
"lib2","SARS-CoV-2","TCCAGCAGCTTAATGT",1,0.13,NA,NA,NA,NA,NA,NA,"stop","A42D F62I F99Y F156A V181T T201*",6
"lib2","SARS-CoV-2","TCCAGCATATATTCCT",7,43.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14R G51C Y165N G172K",4
"lib2","SARS-CoV-2","TCCAGCATGTATAAAA",10,248.15,9.74,-1.1,0.03,2.91,1.07,0,">1 nonsynonymous","T63S R73A",2
"lib2","SARS-CoV-2","TCCAGCCAGACACTAA",3,9.99,10.91,0.07,0.12,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAGCCATGATAGAC",2,57.21,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y93M P177E",2
"lib2","SARS-CoV-2","TCCAGCCCAAGCGAAG",5,118.97,8.85,-1.98,0.09,1.87,1.06,0,">1 nonsynonymous","E76M V173L Y178I T201N",4
"lib2","SARS-CoV-2","TCCAGCCGCAGAACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1E K26* S147L T201V",4
"lib2","SARS-CoV-2","TCCAGCGAATTGATAA",1,9.48,8.67,-2.16,0.38,2.2,1.06,0.01,">1 nonsynonymous","S41W Y143N",2
"lib2","SARS-CoV-2","TCCAGCGAGATCATAA",4,11.72,8.96,-1.88,0.19,1.75,1.09,0.02,">1 nonsynonymous","G9E A81T A105M",3
"lib2","SARS-CoV-2","TCCAGCGATGACATAT",3,54.16,9.39,-1.45,0.08,2.84,1.17,0,"1 nonsynonymous","Y119Q",1
"lib2","SARS-CoV-2","TCCAGCGCAGGGAAAC",3,0.77,NA,NA,NA,NA,NA,NA,"stop","K26I N92W S129Q F156L Q176G C195*",6
"lib2","SARS-CoV-2","TCCAGCGTATACAGAG",4,88.45,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F17S W23S C49T Y93M P149K F167E",6
"lib2","SARS-CoV-2","TCCAGCGTCATAAAAC",10,139.97,10.77,-0.06,0.02,2.99,1.03,0,"1 nonsynonymous","D98H",1
"lib2","SARS-CoV-2","TCCAGGAAGAATATAA",3,54.82,10.06,-0.78,0.08,2.56,1.11,0,">1 nonsynonymous","D34F T100M",2
"lib2","SARS-CoV-2","TCCAGGAATAAAAAAC",3,23.08,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","Y35L A81S L183R",3
"lib2","SARS-CoV-2","TCCAGGAATGGCACAT",6,111.22,9.38,-1.46,0.06,1.93,1.03,0,">1 nonsynonymous","V37N Y91V D98A",3
"lib2","SARS-CoV-2","TCCAGGATTAACAGTA",12,116.64,8.4,-2.43,0.09,2.08,1.07,0,">1 nonsynonymous","A81T N118R S200F",3
"lib2","SARS-CoV-2","TCCAGGATTTCTCCCA",4,12.55,11.08,0.24,0.1,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAGGCGTGGACCAA",2,17.11,10.81,-0.02,0.08,2.98,1.03,0,"1 nonsynonymous","P7N",1
"lib2","SARS-CoV-2","TCCAGGGAAAAACAAT",7,58.27,10.1,-0.73,0.04,2.93,1.05,0,">1 nonsynonymous","S45A P169V",2
"lib2","SARS-CoV-2","TCCAGGGCCTCACTTG",7,18.76,6.94,-3.89,0.49,1.5,1.36,0.04,">1 nonsynonymous","A22T G83Y T100G",3
"lib2","SARS-CoV-2","TCCAGGGCGTTATTGT",15,53.85,6.01,-4.82,1.11,1.5,1.2,0.01,">1 nonsynonymous","V37S N92H V103D",3
"lib2","SARS-CoV-2","TCCAGGTAGATTAGAC",12,146.72,9.29,-1.54,0.07,1.95,1.08,0,">1 nonsynonymous","Y35R F62S G174N",3
"lib2","SARS-CoV-2","TCCAGGTAGGTTAAGG",3,7.32,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C49L K94V R136L",3
"lib2","SARS-CoV-2","TCCAGGTTAAGTAGTA",2,28.37,7.03,-3.8,0.19,1.5,1.09,0.01,">1 nonsynonymous","Y93T C158Q",2
"lib2","SARS-CoV-2","TCCAGGTTGAGCGAAA",22,5.58,NA,NA,NA,NA,NA,NA,"stop","I2F S36G P149*",3
"lib2","SARS-CoV-2","TCCAGGTTGCAAATTT",5,32.86,9.59,-1.24,0.13,2.14,1.1,0.01,">1 nonsynonymous","D97S R127G",2
"lib2","SARS-CoV-2","TCCAGTAATGGATACC",8,184.92,10.81,-0.03,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCAGTACATGAACCT",25,556.02,9.88,-0.96,0.03,2.9,1.09,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","TCCAGTACATGCATAA",3,52.23,10.68,-0.15,0.16,2.48,1.1,0.02,"1 nonsynonymous","S139N",1
"lib2","SARS-CoV-2","TCCAGTATAGAAATAA",4,39.96,8.46,-2.38,0.16,1.65,1.17,0.01,">1 nonsynonymous","G86T K199N",2
"lib2","SARS-CoV-2","TCCAGTCCTACAGGCC",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112A A145P",2
"lib2","SARS-CoV-2","TCCAGTCTTAACCAAT",4,53.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S19R I80H K128G",3
"lib2","SARS-CoV-2","TCCAGTGAAAAATCGT",6,81.37,10.75,-0.08,0.03,2.94,1.07,0,"1 nonsynonymous","Y50F",1
"lib2","SARS-CoV-2","TCCAGTGAAGGAACCT",1,12.45,10.91,0.07,0.13,2.9,1.11,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCCAGTGGGGCGGACG",3,49.71,6.48,-4.36,0.52,1.5,1.11,0.03,">1 nonsynonymous","Y39N N110A Y175L S184M",4
"lib2","SARS-CoV-2","TCCAGTGGTAGGGCCA",12,1.1,NA,NA,NA,NA,NA,NA,"stop","A42* C61N G146F",3
"lib2","SARS-CoV-2","TCCAGTTAAAAGCGAC",6,2.17,NA,NA,NA,NA,NA,NA,"stop","F126* F134R T170L L183V",4
"lib2","SARS-CoV-2","TCCATAAAACCACACA",5,54.34,10.78,-0.06,0.06,2.83,1.16,0,">1 nonsynonymous","L131M Q168Y",2
"lib2","SARS-CoV-2","TCCATAAAACTACATA",14,231.92,10.59,-0.25,0.04,2.85,1.04,0,"1 nonsynonymous","E135S",1
"lib2","SARS-CoV-2","TCCATAACCAGGAATC",6,126.78,10.88,0.05,0.04,2.96,1.04,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","TCCATAACCGACCGAG",1,0.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","TCCATAACTCAGTAAC",7,122.27,10.92,0.08,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCATAACTTATAAAC",16,148.7,10.79,-0.05,0.05,2.9,1.11,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","TCCATAAGACGAATAC",2,22.03,10.85,0.02,0.07,2.86,1.16,0,"1 nonsynonymous","F62V",1
"lib2","SARS-CoV-2","TCCATAAGCTCACGAG",1,10.36,8.06,-2.77,0.21,1.5,1,0.01,">1 nonsynonymous","E10D K48Y P96C",3
"lib2","SARS-CoV-2","TCCATAAGTAAACTAG",1,11.4,10.65,-0.19,0.08,3,1.04,0,">1 nonsynonymous","L5G S43P",2
"lib2","SARS-CoV-2","TCCATAAGTAGAAATA",6,42.24,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I2H C49V N64V D97M D137T",5
"lib2","SARS-CoV-2","TCCATAATGTCGACCA",6,14.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K56L P96F N120E G152L",4
"lib2","SARS-CoV-2","TCCATAATTCGAAGAT",1,5.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R S113M S147A",3
"lib2","SARS-CoV-2","TCCATACAAAATAATA",5,71.89,8.27,-2.56,0.12,2.05,1.07,0.01,"1 nonsynonymous","D112M",1
"lib2","SARS-CoV-2","TCCATACCAATGGGAG",5,107.72,6.64,-4.2,0.41,1.5,1.15,0.02,">1 nonsynonymous","V37F F99L C158R",3
"lib2","SARS-CoV-2","TCCATACCTAGTATTT",5,48.14,10.26,-0.57,0.07,2.79,1.06,0,">1 nonsynonymous","G83Y D98L",2
"lib2","SARS-CoV-2","TCCATACGTTTCGAAT",2,43.44,10.67,-0.17,0.02,2.95,1.05,0,"1 nonsynonymous","P191I",1
"lib2","SARS-CoV-2","TCCATAGAATTATATG",2,32.5,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N1W G9P Q144V Y178R",4
"lib2","SARS-CoV-2","TCCATAGACCTTGAAT",1,11.04,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","L5V T15L C31Q K48N F99L L122I",6
"lib2","SARS-CoV-2","TCCATAGCTAAACAAT",1,0.33,NA,NA,NA,NA,NA,NA,"stop","I2N N107W L122* S184E",4
"lib2","SARS-CoV-2","TCCATAGCTACCCATA",1,16.24,10.19,-0.65,0.08,2.75,1.07,0.01,">1 nonsynonymous","K48R S139V L187H",3
"lib2","SARS-CoV-2","TCCATAGCTATGTATT",4,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3E F99Q L131V F156H",4
"lib2","SARS-CoV-2","TCCATAGCTCTATTTG",3,45.73,10.34,-0.49,0.04,3,1.01,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TCCATAGTAAAATTGG",7,60.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y93I D112P P177Y",3
"lib2","SARS-CoV-2","TCCATATAAAAAGTGA",3,34.63,8.24,-2.59,0.18,2.08,1.07,0.01,">1 nonsynonymous","S41G N64S A105V N110S Y119S N171S",6
"lib2","SARS-CoV-2","TCCATATGACAGTCTG",5,31.66,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S45V R73Q I88S S108T",4
"lib2","SARS-CoV-2","TCCATATGACTAGTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3F T63C K87* I142R Q163T",5
"lib2","SARS-CoV-2","TCCATATTATACACCG",2,24.66,10.22,-0.61,0.12,2.64,1.04,0.01,"1 nonsynonymous","N13C",1
"lib2","SARS-CoV-2","TCCATCAAAAACGAAT",2,13.39,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","L5S V11S A18K L60R S108E G146K",6
"lib2","SARS-CoV-2","TCCATCAAATTACCGG",2,20.59,9.27,-1.57,0.13,1.83,1.18,0.01,">1 nonsynonymous","F44L W106L",2
"lib2","SARS-CoV-2","TCCATCAACGTCAAAA",4,163.65,10.4,-0.43,0.05,2.89,1.1,0,">1 nonsynonymous","K26T K114N E154N",3
"lib2","SARS-CoV-2","TCCATCAATAATGACC",11,129.69,6.16,-4.67,0.51,1.5,1.15,0.01,">1 nonsynonymous","I2N Y35R K56E N64G P82N G152S F156I A192F",8
"lib2","SARS-CoV-2","TCCATCACATTGAAAC",6,117.77,10.82,-0.01,0.05,2.96,1.06,0,"1 nonsynonymous","E135Q",1
"lib2","SARS-CoV-2","TCCATCAGCCGCCTTT",4,48.43,9.76,-1.08,0.1,2.39,1,0,">1 nonsynonymous","V11F L60I N130F",3
"lib2","SARS-CoV-2","TCCATCCAAGATTACA",6,40.36,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C61F V77Q Y91K R127T",4
"lib2","SARS-CoV-2","TCCATCCCAAAAAGGA",1,132.36,10.64,-0.2,0.04,2.96,1.03,0,">1 nonsynonymous","V11L Y39V R78S",3
"lib2","SARS-CoV-2","TCCATCCGCTCCAAAG",1,43.38,10.79,-0.05,0.05,3,1.03,0,"1 nonsynonymous","A22E",1
"lib2","SARS-CoV-2","TCCATCGACAATACTC",6,4.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","TCCATCGAGGCGTTCC",3,44.95,9.45,-1.39,0.07,2.38,1.05,0,">1 nonsynonymous","Y121S V153D",2
"lib2","SARS-CoV-2","TCCATCGAGGTTATGA",3,25.35,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G9L D97S A105R P149L E154L",5
"lib2","SARS-CoV-2","TCCATCGAGTCCCATG",13,23.52,9.12,-1.72,0.18,1.51,1.06,0.01,">1 nonsynonymous","N1E S41L I72A",3
"lib2","SARS-CoV-2","TCCATCGCACAAGCTT",3,1.47,NA,NA,NA,NA,NA,NA,"stop","N92* C102L",2
"lib2","SARS-CoV-2","TCCATCGCCGGTAATC",2,22.86,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C61H A89E G101L L122E I138V",5
"lib2","SARS-CoV-2","TCCATCTAATGGGACG",15,58.24,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C61D K94F T100F Y165S",4
"lib2","SARS-CoV-2","TCCATCTACAACATAC",6,63.33,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S113L P177V",2
"lib2","SARS-CoV-2","TCCATCTGCTAGCCGG",6,16.38,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","F70E G83P S129Q V153A",4
"lib2","SARS-CoV-2","TCCATCTTCATATAAC",1,13.62,9.13,-1.71,0.19,1.62,1.17,0.02,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","TCCATCTTCCAAATCC",4,87.27,6,-4.84,1.85,1.5,1.19,0.02,">1 nonsynonymous","T3H F12T T140H Y175S",4
"lib2","SARS-CoV-2","TCCATCTTGTACTAAA",9,151.82,9.5,-1.34,0.06,1.92,1.09,0,">1 nonsynonymous","T15S A33R A42L Q84H I138L",5
"lib2","SARS-CoV-2","TCCATGAACAAAGCTT",10,116.07,9.62,-1.21,0.05,2.03,1.03,0,">1 nonsynonymous","S41L K56M G83V T140S",4
"lib2","SARS-CoV-2","TCCATGAACCAAATGA",8,49.69,9.19,-1.65,0.28,1.5,1.01,0.04,">1 nonsynonymous","T3S D34L A105F",3
"lib2","SARS-CoV-2","TCCATGAACCAATACT",4,14.38,NA,NA,NA,NA,NA,NA,"stop","T15M K94* R124G S139T G152H",5
"lib2","SARS-CoV-2","TCCATGAAGAATATTC",10,5.7,NA,NA,NA,NA,NA,NA,"stop","G9Q S45* L122N G155W",4
"lib2","SARS-CoV-2","TCCATGAAGATGCACT",5,4.08,NA,NA,NA,NA,NA,NA,"stop","G9K A81* W106I T148I G166W",5
"lib2","SARS-CoV-2","TCCATGAATGGGTAGG",11,173.61,10.62,-0.21,0.04,2.92,1.09,0,"1 nonsynonymous","A105T",1
"lib2","SARS-CoV-2","TCCATGACCGCGGAGA",4,79.95,8.22,-2.62,0.09,2.51,1.06,0,">1 nonsynonymous","V11Y K114E L122T G146N",4
"lib2","SARS-CoV-2","TCCATGACTAGATGGC",3,94.74,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E10A P54A Y119H R127W Q176S",5
"lib2","SARS-CoV-2","TCCATGATAAGCAAGA",16,43.84,6,-4.84,2,3,1.19,0,">1 nonsynonymous","V20W A42L I72M N130I",4
"lib2","SARS-CoV-2","TCCATGATAATCCTAC",1,31.93,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G83P I138F S147K",3
"lib2","SARS-CoV-2","TCCATGATTCAAAAAT",6,122.83,10.83,-0.01,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCATGCATATGTCGG",1,15.94,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","Q79R G86E N118Q",3
"lib2","SARS-CoV-2","TCCATGCATTCCGAGC",4,6.06,6,-4.84,2,1.5,1.04,0.04,">1 nonsynonymous","A42V K48W P133R",3
"lib2","SARS-CoV-2","TCCATGCTAAGTCTTT",5,27.9,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6V D112L P169T Y178L",4
"lib2","SARS-CoV-2","TCCATGGAGAGAAACG",4,25.52,9.78,-1.05,0.15,2.02,1.04,0.01,">1 nonsynonymous","F8W A67Y V182I",3
"lib2","SARS-CoV-2","TCCATGGATGTCGTGC",12,178.36,10.8,-0.03,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCATGTGATGCCAAG",2,37.84,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G9W S41R K56L F99H S129P D137E T148V",7
"lib2","SARS-CoV-2","TCCATTAATATACACA",9,55.18,10.43,-0.4,0.06,2.82,1.15,0,"1 nonsynonymous","A14G",1
"lib2","SARS-CoV-2","TCCATTACATAAACGA",7,17.97,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","T15K G101A",2
"lib2","SARS-CoV-2","TCCATTACCAGTTTAC",1,7.09,6.2,-4.63,1.81,1.5,1.12,0.03,">1 nonsynonymous","S53I A89M Y123S",3
"lib2","SARS-CoV-2","TCCATTACTTGTACAG",4,0,NA,NA,NA,NA,NA,NA,"stop","S36* T46F D98V Y123K",4
"lib2","SARS-CoV-2","TCCATTAGAGACGTCA",2,7.13,9.54,-1.3,0.1,2.25,1.02,0,">1 nonsynonymous","I138L Y165L",2
"lib2","SARS-CoV-2","TCCATTATCCGATCAG",15,18.17,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9M A89P I104L L183P",4
"lib2","SARS-CoV-2","TCCATTCCATCTAGCC",13,264.42,9.28,-1.55,0.05,2.45,1.04,0,">1 nonsynonymous","L57F A81T G166N",3
"lib2","SARS-CoV-2","TCCATTCCGCACCAAA",6,20.1,6,-4.84,2,3,1.12,0,">1 nonsynonymous","P96K W106G P169L",3
"lib2","SARS-CoV-2","TCCATTCTTAATTAAT",5,69.71,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","D68G",1
"lib2","SARS-CoV-2","TCCATTCTTAGCGAAA",6,65.51,10.69,-0.15,0.02,2.99,1.02,0,">1 nonsynonymous","K56E Y66H T201M",3
"lib2","SARS-CoV-2","TCCATTGACAGGACGA",11,1.29,NA,NA,NA,NA,NA,NA,"stop","F99A E154*",2
"lib2","SARS-CoV-2","TCCATTGCTACGAAGT",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E F44I D68P G146P F156V Q163K",6
"lib2","SARS-CoV-2","TCCATTGGGTTAAAAA",4,1.21,NA,NA,NA,NA,NA,NA,"stop","N13* S53F Y123M R136W",4
"lib2","SARS-CoV-2","TCCATTGTTACGAAAA",1,5.55,9.24,-1.6,0.17,2.8,1.21,0.01,"1 nonsynonymous","G117T",1
"lib2","SARS-CoV-2","TCCATTTAAGGTTCCG",1,12.54,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","T85K F99G F126V F134L",4
"lib2","SARS-CoV-2","TCCATTTACCAAATCC",9,55.55,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L60F F99E V173C T201K",4
"lib2","SARS-CoV-2","TCCATTTATATGAGTT",3,12.86,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N1I S19I T85V",3
"lib2","SARS-CoV-2","TCCATTTATGTCAACC",5,105,10.85,0.01,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCATTTCAAAGACAA",20,201.91,10.8,-0.04,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCATTTCACAGATGT",3,74.01,6.04,-4.8,1.09,1.5,1.2,0.03,">1 nonsynonymous","N24F A89K",2
"lib2","SARS-CoV-2","TCCATTTGTAAACTGT",11,60.63,9.78,-1.06,0.11,1.94,1.03,0,"1 nonsynonymous","S69I",1
"lib2","SARS-CoV-2","TCCATTTGTAGGAACA",5,257.9,9.88,-0.96,0.05,2.7,1.04,0,"1 nonsynonymous","C6K",1
"lib2","SARS-CoV-2","TCCATTTGTGATATCG",1,17.43,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R27V D34R D98Q R136S A145T L187C",6
"lib2","SARS-CoV-2","TCCCAAAACGGCAAAA",11,252.34,10.12,-0.72,0.04,2.72,1.03,0,">1 nonsynonymous","T100R A105Y",2
"lib2","SARS-CoV-2","TCCCAAAAGAAATGAG",1,12.22,6.26,-4.58,2,1.5,1.11,0.04,">1 nonsynonymous","R25P A67Y G86A T140I",4
"lib2","SARS-CoV-2","TCCCAAAAGCGAGGTG",2,83.61,10.55,-0.29,0.04,2.95,1.02,0,">1 nonsynonymous","L95I L122D",2
"lib2","SARS-CoV-2","TCCCAAAAGTAACAGA",4,61.04,10.14,-0.69,0.05,2.81,1.07,0,">1 nonsynonymous","N107G K198E",2
"lib2","SARS-CoV-2","TCCCAAAAGTTCCGCG",3,2.5,NA,NA,NA,NA,NA,NA,"stop","L5* D68K K87I G117R F126C",5
"lib2","SARS-CoV-2","TCCCAAACAGACACCA",3,11.5,7.54,-3.29,0.09,2.33,1.12,0,">1 nonsynonymous","V71I Y175L",2
"lib2","SARS-CoV-2","TCCCAAACCTTCAGGA",1,16.93,10.42,-0.41,0.08,2.79,1.24,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","TCCCAAACTCATATTA",4,12.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G166L G174W",2
"lib2","SARS-CoV-2","TCCCAAAGACACTTCC",5,94.45,6,-4.84,0.63,1.5,1.15,0.01,">1 nonsynonymous","F12S C150K L162Q",3
"lib2","SARS-CoV-2","TCCCAAAGTTGATAAT",14,81.42,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F70L C102W G155I G174R",4
"lib2","SARS-CoV-2","TCCCAAATTAACAATA",4,13.73,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T63V G74N V103R T201S",4
"lib2","SARS-CoV-2","TCCCAACAAACATTTA",3,11.96,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S69K S113Y R136M",3
"lib2","SARS-CoV-2","TCCCAACAAAGAAGAT",3,34.59,10.29,-0.55,0.06,2.97,1.06,0,">1 nonsynonymous","I2L A145I",2
"lib2","SARS-CoV-2","TCCCAACCCAAACAGC",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L G116W",2
"lib2","SARS-CoV-2","TCCCAACGAAACGACA",15,244.53,10.87,0.04,0.04,2.9,1.09,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","TCCCAACGACAGAGTC",1,15.85,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18R R73A V103Y",3
"lib2","SARS-CoV-2","TCCCAACGAGACTCCC",6,87.94,10.78,-0.06,0.06,2.95,1.08,0,"1 nonsynonymous","I104M",1
"lib2","SARS-CoV-2","TCCCAACTCACTCTTG",15,1.03,NA,NA,NA,NA,NA,NA,"stop","E10* A18T Q176L",3
"lib2","SARS-CoV-2","TCCCAAGAAAATATAT",2,18.9,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V20L N58T S129C T140Q",4
"lib2","SARS-CoV-2","TCCCAAGACATCATTA",3,13.36,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C61F V103A G152L",3
"lib2","SARS-CoV-2","TCCCAAGAGTAAGAAG",3,6.71,NA,NA,NA,NA,NA,NA,"stop","L38S P54A S108*",3
"lib2","SARS-CoV-2","TCCCAAGGATAAGTGC",1,26.3,10.7,-0.13,0.09,2.84,1.17,0.01,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","TCCCAAGGCTAAATCC",6,62.88,6,-4.84,2,1.5,1.27,0.03,"1 nonsynonymous","V20R",1
"lib2","SARS-CoV-2","TCCCAATAAAAAAGAT",2,67.98,9.13,-1.7,0.09,2.54,1.06,0,">1 nonsynonymous","C6R V37G T55D G174L",4
"lib2","SARS-CoV-2","TCCCAATAAGCCACAA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","K56P S147*",2
"lib2","SARS-CoV-2","TCCCAATCATCTAGAG",5,0.08,NA,NA,NA,NA,NA,NA,"stop","L60D N120I P161*",3
"lib2","SARS-CoV-2","TCCCAATTCTAATAAT",3,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1K G86K Y121G",3
"lib2","SARS-CoV-2","TCCCAATTCTCAATTG",1,64.7,10.62,-0.22,0.04,2.98,1,0,">1 nonsynonymous","D97Y V173G P197S",3
"lib2","SARS-CoV-2","TCCCAATTCTTAAACT",13,240.28,9.83,-1,0.06,2.38,1.02,0,">1 nonsynonymous","I88L N130E",2
"lib2","SARS-CoV-2","TCCCAATTTAATTCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F8S D75R T85Y F167*",4
"lib2","SARS-CoV-2","TCCCACAAAAATCTTG",8,182.37,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N107R R127I F160E",3
"lib2","SARS-CoV-2","TCCCACACAAAACAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T55I Q176*",2
"lib2","SARS-CoV-2","TCCCACACATCCTAAA",2,29.1,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V37P G74P F156S",3
"lib2","SARS-CoV-2","TCCCACCCCCCCTATC",1,0.24,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib2","SARS-CoV-2","TCCCACCTCAGCCCAC",1,11.24,6,-4.84,1.38,3,1.01,0,">1 nonsynonymous","V11P C49P N157T",3
"lib2","SARS-CoV-2","TCCCACCTCTATTCGC",5,49.97,10.86,0.02,0.07,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCCACGATGACCGGT",4,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G Q144H",2
"lib2","SARS-CoV-2","TCCCACGGTCAGATAC",5,182.78,9.25,-1.59,0.04,2.94,1.08,0,">1 nonsynonymous","N4A G117Q",2
"lib2","SARS-CoV-2","TCCCACGTGTTTATTC",4,56.17,10.76,-0.07,0.05,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCACTAAACGATTG",1,19.42,9.45,-1.38,0.14,1.95,1.01,0.01,">1 nonsynonymous","C6R S139E E154T",3
"lib2","SARS-CoV-2","TCCCACTACGATAAAC",4,45.25,8.84,-1.99,0.1,2.99,1.07,0,">1 nonsynonymous","N64R G166C",2
"lib2","SARS-CoV-2","TCCCACTGTTACCTAG",10,139.88,10.69,-0.15,0.04,2.92,1.07,0,">1 nonsynonymous","Y39V Y178N",2
"lib2","SARS-CoV-2","TCCCACTTGGGCATAA",1,40.08,9.75,-1.09,0.15,2.24,1.13,0.01,"1 nonsynonymous","F8K",1
"lib2","SARS-CoV-2","TCCCAGAAACATCTAA",10,324.75,10.05,-0.79,0.03,2.92,1.06,0,">1 nonsynonymous","D90S F156S",2
"lib2","SARS-CoV-2","TCCCAGAAAGGTAAAT",11,314.56,9.13,-1.71,0.04,2.81,1.1,0,">1 nonsynonymous","T85G Y119N E141F",3
"lib2","SARS-CoV-2","TCCCAGAACCATATGG",2,56.63,9,-1.83,0.1,1.63,1.06,0.01,">1 nonsynonymous","E10K A33G A105W T140I",4
"lib2","SARS-CoV-2","TCCCAGAATTAACGTA",6,106.52,10.39,-0.44,0.05,2.9,1.06,0,">1 nonsynonymous","K48M T63L",2
"lib2","SARS-CoV-2","TCCCAGACCATATTTC",1,16.87,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","E10S Y35L L95S",3
"lib2","SARS-CoV-2","TCCCAGACCGCAGGGC",1,19.92,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","W23V A89K",2
"lib2","SARS-CoV-2","TCCCAGACGAGGACGC",1,41.63,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S129V R136G I142L F167D L187G",5
"lib2","SARS-CoV-2","TCCCAGCAAGAGAACG",1,0.39,NA,NA,NA,NA,NA,NA,"stop","A67D G74L G86* V103L Y119M R136W",6
"lib2","SARS-CoV-2","TCCCAGCAAGGAACTA",4,36.43,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4S N107F Y143C",3
"lib2","SARS-CoV-2","TCCCAGCAGCACTTCG",2,105.72,10,-0.83,0.07,2.7,1,0,">1 nonsynonymous","D98L G155R",2
"lib2","SARS-CoV-2","TCCCAGCGCAAGCTGT",2,33.81,10.78,-0.05,0.05,2.97,1,0,"1 nonsynonymous","S184T",1
"lib2","SARS-CoV-2","TCCCAGCTACAACATA",4,67.57,9.46,-1.37,0.07,2.75,1.08,0,">1 nonsynonymous","N64P K87S Y91N",3
"lib2","SARS-CoV-2","TCCCAGCTACATAGAA",3,10.36,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G9L D34P P82M E154D",4
"lib2","SARS-CoV-2","TCCCAGCTACTAGAAG",2,63.8,10.31,-0.52,0.03,2.89,1,0,"1 nonsynonymous","W106Y",1
"lib2","SARS-CoV-2","TCCCAGGAAAATCCCC",8,198.76,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D68F S113K Y121L A145C G172D",5
"lib2","SARS-CoV-2","TCCCAGGGCTGAAAAC",3,82.38,10.79,-0.04,0.05,2.97,1.03,0,">1 nonsynonymous","F12L L122R T148R",3
"lib2","SARS-CoV-2","TCCCATAAACGCGCGT",4,96.23,7.89,-2.94,0.15,1.5,1.06,0.01,">1 nonsynonymous","F17A F126R",2
"lib2","SARS-CoV-2","TCCCATAAGTGATTAT",2,40.05,10.28,-0.55,0.18,2.53,1.22,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCCCATAGCTTGTGAT",12,1060.63,7.56,-3.28,0.09,2.01,1.1,0,">1 nonsynonymous","T63Y Y175D",2
"lib2","SARS-CoV-2","TCCCATAGTTTAGCGC",3,46.32,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R78K S113H Y121P F134R",4
"lib2","SARS-CoV-2","TCCCATATCGGTTAAA",11,110.59,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9T I72R N118F R124T K128N R136S S164V",7
"lib2","SARS-CoV-2","TCCCATATTTACTACC",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13C T55F G101D S147Y L188R",5
"lib2","SARS-CoV-2","TCCCATCAAAGCCTTT",1,10.12,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","D112S Q144E T170Y P177L L183I",5
"lib2","SARS-CoV-2","TCCCATCACCTTTATT",21,73.3,6,-4.84,1.68,1.5,1.22,0.02,">1 nonsynonymous","L38H D59Y A81T",3
"lib2","SARS-CoV-2","TCCCATCACGAATTGA",1,18.1,10.75,-0.08,0.04,2.87,1.15,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","TCCCATCACTTTCTAT",2,2.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H K114R",2
"lib2","SARS-CoV-2","TCCCATCCACAAGTTT",14,10.37,NA,NA,NA,NA,NA,NA,"stop","S36* L122F",2
"lib2","SARS-CoV-2","TCCCATCGGCTCCGAG",11,110.51,6.07,-4.77,0.6,1.5,1.12,0.01,">1 nonsynonymous","S19M P96M",2
"lib2","SARS-CoV-2","TCCCATGAGGCATTAA",1,48.98,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G101V N107S",2
"lib2","SARS-CoV-2","TCCCATGATTACCTGG",3,44.94,10.31,-0.53,0.04,3,1.01,0,">1 nonsynonymous","P7T Y39Q F160I",3
"lib2","SARS-CoV-2","TCCCATGCTGACAATA",1,18.46,6.33,-4.51,0.66,1.5,1.12,0.02,"1 nonsynonymous","R124T",1
"lib2","SARS-CoV-2","TCCCATTAACAGTCAG",12,82.9,6,-4.84,1.04,1.5,1.13,0,">1 nonsynonymous","F12V S53G V115L C150R A192L",5
"lib2","SARS-CoV-2","TCCCATTACGAAGAAC",2,0.24,NA,NA,NA,NA,NA,NA,"stop","L5Y C61E A81S L122*",4
"lib2","SARS-CoV-2","TCCCATTAGCCCAGCG",8,15.17,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","L57C I72G P133Q",3
"lib2","SARS-CoV-2","TCCCATTATTGAGAAC",1,38.75,9.07,-1.77,0.07,2.91,1,0,">1 nonsynonymous","S41T T55L F62L T170L",4
"lib2","SARS-CoV-2","TCCCATTCATTAAGAA",2,6.07,6,-4.84,2,3,1.1,0,">1 nonsynonymous","K48E L131P S139P A145S N171Y F185H",6
"lib2","SARS-CoV-2","TCCCATTGCAAATCTC",9,209.7,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19K S29P N157Q",3
"lib2","SARS-CoV-2","TCCCATTGCCAATACT",4,27.23,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","V11R C61S G83T I104P Y121T Y143H N157H",7
"lib2","SARS-CoV-2","TCCCCAAAATTTGAAT",6,48.9,9.04,-1.8,0.1,1.77,1.08,0,">1 nonsynonymous","V52T P96H L188V",3
"lib2","SARS-CoV-2","TCCCCAAACTATATTA",3,0.91,NA,NA,NA,NA,NA,NA,"stop","A33G F44G V52* D68Q D90L N151D T201R",7
"lib2","SARS-CoV-2","TCCCCAAATACATTCA",5,109.83,10.77,-0.07,0.05,2.95,1.06,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","TCCCCAAATCTCAATT",5,36.14,8.78,-2.05,0.06,2.91,1.1,0,">1 nonsynonymous","S36M K56Q D90N D97L S113A Y119D",6
"lib2","SARS-CoV-2","TCCCCAACACAATTAA",27,405.7,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N1I F126D L162V S184V",4
"lib2","SARS-CoV-2","TCCCCAACCCTAGCCA",16,156.93,9.84,-1,0.05,2.2,1.03,0,"1 nonsynonymous","I28Q",1
"lib2","SARS-CoV-2","TCCCCACAAAGTTCAT",12,208.52,10.23,-0.6,0.04,2.9,1.09,0,">1 nonsynonymous","G9S G152P",2
"lib2","SARS-CoV-2","TCCCCACCAAAATGTT",6,77.33,6.36,-4.47,0.42,1.5,1.1,0.01,">1 nonsynonymous","F44T Y121S Y143P",3
"lib2","SARS-CoV-2","TCCCCACGTGAACGGG",5,51.72,6.01,-4.83,0.75,2.69,1.17,0.01,">1 nonsynonymous","F12L F17K L60I L95I",4
"lib2","SARS-CoV-2","TCCCCAGACGCTTCCA",10,79.62,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C49R L60S D75I T201Q",4
"lib2","SARS-CoV-2","TCCCCAGCTCCCAGGC",3,2.45,NA,NA,NA,NA,NA,NA,"stop","S19I A105E W106R P149* G174*",5
"lib2","SARS-CoV-2","TCCCCAGGTGCCAACT",1,63.44,10.76,-0.07,0.06,2.86,1.16,0,"1 nonsynonymous","R16M",1
"lib2","SARS-CoV-2","TCCCCATATACCTTGG",5,95.99,9.69,-1.15,0.04,2.85,1.08,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","TCCCCATATAGCTACC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","TCCCCATCATGCACAA",3,33.56,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","A22Y D59V D112S L122W",4
"lib2","SARS-CoV-2","TCCCCATCCAGATGTA",3,95.59,10.84,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCCAACAGAATTG",3,16.14,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K26L Y35A S45L L57Q G155N",5
"lib2","SARS-CoV-2","TCCCCCAACCCGGAAT",4,0.06,NA,NA,NA,NA,NA,NA,"stop","A14M D90T S129* F156N",4
"lib2","SARS-CoV-2","TCCCCCAATATTAGGC",3,24.49,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N4V I28N D137M",3
"lib2","SARS-CoV-2","TCCCCCACAATCAACA",1,37.78,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","K87F R136G S139T C150L",4
"lib2","SARS-CoV-2","TCCCCCACACCAATAC",3,129.9,9.98,-0.86,0.07,2.58,1.03,0,">1 nonsynonymous","F99I L122Q F160P",3
"lib2","SARS-CoV-2","TCCCCCAGGTACTAAA",2,42.07,8.41,-2.43,0.25,2.11,1.16,0.02,">1 nonsynonymous","K94S Y119Q",2
"lib2","SARS-CoV-2","TCCCCCCCACTTTTTC",1,6.19,10.86,0.03,0.16,2.63,1.4,0,"1 nonsynonymous","N130V",1
"lib2","SARS-CoV-2","TCCCCCCCGCACAGCT",3,40.74,10.78,-0.06,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCCCCTAATGCGT",2,18.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F44L K48A P82N",3
"lib2","SARS-CoV-2","TCCCCCCCTATCATTA",4,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E V37S G83M V194I",4
"lib2","SARS-CoV-2","TCCCCCCGCAAAAGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103K K132D",2
"lib2","SARS-CoV-2","TCCCCCCTTGTAGGTT",5,41.71,9.67,-1.16,0.26,1.5,1.01,0.04,">1 nonsynonymous","L95P Q168R",2
"lib2","SARS-CoV-2","TCCCCCGGTGCAAGAT",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R127S N171G",2
"lib2","SARS-CoV-2","TCCCCCTATCTCGATA",3,75.16,10.25,-0.58,0.05,2.91,1.04,0,">1 nonsynonymous","E10G Y39E K56M",3
"lib2","SARS-CoV-2","TCCCCCTATGTATACG",5,109.61,10.3,-0.54,0.04,2.93,1.03,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","TCCCCCTATTGTGAAT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52C F62C F99E",3
"lib2","SARS-CoV-2","TCCCCCTTCCACTGCA",12,140.08,10.81,-0.03,0.03,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCCTTGGGCCCTG",2,23.59,7.29,-3.54,0.4,1.5,1.09,0.04,">1 nonsynonymous","Y50K I104M",2
"lib2","SARS-CoV-2","TCCCCCTTTTCATTGG",4,90.24,10.61,-0.22,0.07,2.81,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCGAAAAGGTAAC",2,17.42,9.88,-0.96,0.06,3,1.01,0,">1 nonsynonymous","L5V G74Q",2
"lib2","SARS-CoV-2","TCCCCGAACACATCCC",12,210.83,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C31A N92T S200E",3
"lib2","SARS-CoV-2","TCCCCGAATGTGATGC",5,138.72,10.78,-0.05,0.05,2.93,1.09,0,"1 nonsynonymous","K198W",1
"lib2","SARS-CoV-2","TCCCCGACATGCAGTA",3,18.25,10.32,-0.52,0.13,2.66,1.25,0,">1 nonsynonymous","S43P T85L S129N",3
"lib2","SARS-CoV-2","TCCCCGACTACGACAA",7,46.13,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","G9R A14S A105K V115C",4
"lib2","SARS-CoV-2","TCCCCGAGGAATAAAT",2,21.34,9.24,-1.6,0.2,1.68,1.06,0.01,">1 nonsynonymous","R27M C49M",2
"lib2","SARS-CoV-2","TCCCCGCAAAGATTTC",4,10.08,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A14V P82Y P96T G101L",4
"lib2","SARS-CoV-2","TCCCCGCACACTACCT",4,9.32,9.35,-1.48,0.35,1.5,1,0.06,">1 nonsynonymous","F12P P149Q",2
"lib2","SARS-CoV-2","TCCCCGCCCTAACATG",1,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L C61Q Y119L K128V",4
"lib2","SARS-CoV-2","TCCCCGCGAATGTCAT",10,97.59,10.8,-0.03,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCGGAACGCGTGT",3,75.79,10.54,-0.3,0.04,2.92,1.06,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TCCCCGGAATATACGC",9,2.65,NA,NA,NA,NA,NA,NA,"stop","A81H K94S Y119T P133*",4
"lib2","SARS-CoV-2","TCCCCGGAATGAATAT",1,16.49,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13I G146P F185H",3
"lib2","SARS-CoV-2","TCCCCGGCTCTTCAAA",1,50.81,8.02,-2.81,0.11,2.36,1.01,0,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","TCCCCGTGATTAACCT",4,75.09,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","K56S G101S E141I T201S",4
"lib2","SARS-CoV-2","TCCCCTAAAAACAAAA",9,23.82,6.37,-4.47,0.29,3,1.07,0.01,">1 nonsynonymous","A33S P54G Y91P D98F F160P",5
"lib2","SARS-CoV-2","TCCCCTAAGAATGGCT",5,34.57,10.26,-0.58,0.06,2.9,1.08,0,"1 nonsynonymous","G83T",1
"lib2","SARS-CoV-2","TCCCCTACTGTATACA",7,122.41,10.22,-0.61,0.04,2.76,1.07,0,">1 nonsynonymous","G83I N120Q",2
"lib2","SARS-CoV-2","TCCCCTACTTAGACTA",13,221.81,10.8,-0.04,0.05,2.94,1.09,0,"1 nonsynonymous","N110T",1
"lib2","SARS-CoV-2","TCCCCTAGTTCAAACC",7,21.5,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V37N T63E G74R A89L",4
"lib2","SARS-CoV-2","TCCCCTATAAAAAATT",3,194.02,10.05,-0.78,0.06,2.4,1.05,0,">1 nonsynonymous","P133E Q144S",2
"lib2","SARS-CoV-2","TCCCCTATAAGTATTT",7,58.89,10.17,-0.66,0.04,3,1.02,0,">1 nonsynonymous","F8Y R136Q T170S K199C",4
"lib2","SARS-CoV-2","TCCCCTATTGTGTCAC",1,9.96,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G51R F62E V181S",3
"lib2","SARS-CoV-2","TCCCCTCACAACACGC",2,14.06,10.81,-0.02,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCTCACTCTGAAT",2,61.05,10.88,0.04,0.06,2.89,1.12,0,"1 nonsynonymous","D59S",1
"lib2","SARS-CoV-2","TCCCCTCCGAGTCTAG",13,113.17,10.54,-0.3,0.04,2.88,1.08,0,">1 nonsynonymous","N24T K128V",2
"lib2","SARS-CoV-2","TCCCCTCTCAAGCCTT",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F W106P",2
"lib2","SARS-CoV-2","TCCCCTGACATTTTGG",3,23.1,10.76,-0.08,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCCTGATTGAAAAC",4,59.39,10.21,-0.62,0.04,2.9,1.1,0,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","TCCCCTGCAGGAGGCT",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H R27L K56D N120L I142M",5
"lib2","SARS-CoV-2","TCCCCTGCGTAGTTCT",8,74.43,10.8,-0.03,0.06,2.87,1.15,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","TCCCGAAAAAATCGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","D112M N151*",2
"lib2","SARS-CoV-2","TCCCGAAATAACGCAG",14,0.87,NA,NA,NA,NA,NA,NA,"stop","L5C I28G G83F L95S V153F Q163*",6
"lib2","SARS-CoV-2","TCCCGAACATGGCTAA",1,29.46,7.9,-2.94,0.26,1.5,1.18,0.02,">1 nonsynonymous","G83D N109T Q168T",3
"lib2","SARS-CoV-2","TCCCGAACCTCTCCGC",5,100.89,10.39,-0.45,0.03,2.9,1.05,0,">1 nonsynonymous","K94V P197L",2
"lib2","SARS-CoV-2","TCCCGAACTGGGCCAA",2,39.89,6,-4.84,2,3,1.34,0.02,">1 nonsynonymous","V11G A67R L95R F134T",4
"lib2","SARS-CoV-2","TCCCGAATAGAAGGTA",1,33.56,10.52,-0.32,0.08,2.98,1,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","TCCCGACCCATTAAAA",10,67.69,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N4F A89G I142H C158R",4
"lib2","SARS-CoV-2","TCCCGACTAAAGACGT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","L57R G74E P161*",3
"lib2","SARS-CoV-2","TCCCGACTCAGAACAG",8,74.82,9.94,-0.9,0.07,2.67,1.04,0,">1 nonsynonymous","A33S S45P",2
"lib2","SARS-CoV-2","TCCCGACTCATTAGTA",18,251.07,10.08,-0.75,0.05,2.77,1.02,0,">1 nonsynonymous","A81S N120C",2
"lib2","SARS-CoV-2","TCCCGACTGACATATA",2,22.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80R P133S E141G F156V",4
"lib2","SARS-CoV-2","TCCCGACTTTTTGTTA",12,106.68,8.99,-1.85,0.12,1.5,1.06,0.01,">1 nonsynonymous","R16C Y50I S147I",3
"lib2","SARS-CoV-2","TCCCGAGAACGAGTCA",3,68.56,10.72,-0.12,0.07,2.85,1.17,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","TCCCGAGTACAAGCGT",12,140.81,10.03,-0.8,0.06,2.15,1.06,0,">1 nonsynonymous","P54M T85W G152M S200E",4
"lib2","SARS-CoV-2","TCCCGAGTTATGTATA",1,2.12,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131G",1
"lib2","SARS-CoV-2","TCCCGATTAGAGTCAA",9,40.63,8.69,-2.15,0.15,1.5,1.05,0.01,">1 nonsynonymous","K56E G86Q D97R",3
"lib2","SARS-CoV-2","TCCCGATTATATACTA",6,33.83,9.27,-1.57,0.13,1.76,1.1,0.01,">1 nonsynonymous","T15S P82A",2
"lib2","SARS-CoV-2","TCCCGCACCTAATAGA",1,53.54,10.53,-0.31,0.03,2.96,1.04,0,">1 nonsynonymous","T46S S129C",2
"lib2","SARS-CoV-2","TCCCGCACCTATGAAC",2,56.6,9.9,-0.93,0.06,2.32,1.03,0,"1 nonsynonymous","V11P",1
"lib2","SARS-CoV-2","TCCCGCACTAAAGGTT",14,138.08,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V20A N64K P161M",3
"lib2","SARS-CoV-2","TCCCGCAGAAACGTAT",2,19.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54T K94S G101R",3
"lib2","SARS-CoV-2","TCCCGCAGCTTTAGAA",7,77.85,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","S45M L95M K128F Q176K",4
"lib2","SARS-CoV-2","TCCCGCATACCATCAC",3,0.98,NA,NA,NA,NA,NA,NA,"stop","Y39* G117C G155V",3
"lib2","SARS-CoV-2","TCCCGCCCTATCTTCA",4,56.09,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F8V F17K N40C Y123R C158W Y165S T201R",7
"lib2","SARS-CoV-2","TCCCGCCTATACAGTA",4,45.46,9.94,-0.9,0.08,2.67,1.08,0,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","TCCCGCCTTATTCGGT",2,0.81,NA,NA,NA,NA,NA,NA,"stop","E10L I28* V103S",3
"lib2","SARS-CoV-2","TCCCGCGAACCGTATC",3,25.11,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","F99S F126V G155L",3
"lib2","SARS-CoV-2","TCCCGCGAACTCACGT",9,77.26,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","Y66H G101S N107R",3
"lib2","SARS-CoV-2","TCCCGCGACAAATGCT",9,53.11,8.2,-2.64,0.25,1.5,1.07,0.02,">1 nonsynonymous","Y35F K87Y L95P T140L",4
"lib2","SARS-CoV-2","TCCCGCTAACCCAAAG",3,52.6,10.75,-0.09,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCGCTATTTGTTTA",4,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52S C61F T85L F99N",4
"lib2","SARS-CoV-2","TCCCGGAACTATCCTA",8,80.46,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N13M V37P R124L Y143V",4
"lib2","SARS-CoV-2","TCCCGGACTAAATCGG",10,59.27,6.1,-4.74,0.85,1.5,1.18,0.02,">1 nonsynonymous","S19T A81V Y119R",3
"lib2","SARS-CoV-2","TCCCGGACTCGAACAC",10,151.47,10.88,0.05,0.07,2.87,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCCGGCAAAAAATAC",13,29.43,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","C102S N151P P161G",3
"lib2","SARS-CoV-2","TCCCGGCACTATAACT",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R P149V",2
"lib2","SARS-CoV-2","TCCCGGCAGACTCCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","V11E N40* S184K",3
"lib2","SARS-CoV-2","TCCCGGCCCGAAATTA",3,139.55,10.18,-0.66,0.04,2.95,1.04,0,">1 nonsynonymous","F8V K87T",2
"lib2","SARS-CoV-2","TCCCGGCCTTAATCAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCCCGGCTCCCAAGAG",1,32.42,10.49,-0.34,0.08,2.87,1.04,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","TCCCGGGACCTTATTC",2,28.27,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F167P G174W",2
"lib2","SARS-CoV-2","TCCCGGGATATTCACA",27,381.13,7.86,-2.97,0.25,1.5,1.09,0.03,">1 nonsynonymous","A105G P161A Y178N",3
"lib2","SARS-CoV-2","TCCCGTATCTAGAAGC",10,185.53,9.88,-0.95,0.02,2.97,1.02,0,">1 nonsynonymous","G83R F156N",2
"lib2","SARS-CoV-2","TCCCGTCAATACATTC",3,15.96,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","I2D I80Q A145F",3
"lib2","SARS-CoV-2","TCCCGTCTACCGTCTA",5,128.35,10.83,0,0.06,2.95,1.05,0,">1 nonsynonymous","P54E P149S",2
"lib2","SARS-CoV-2","TCCCGTGAAAAACTGC",1,26.14,9.34,-1.49,0.26,1.59,1.2,0.03,">1 nonsynonymous","L60A Q84W V103I",3
"lib2","SARS-CoV-2","TCCCGTGAATACCACC",4,0.86,NA,NA,NA,NA,NA,NA,"stop","R16T N92* Q168A",3
"lib2","SARS-CoV-2","TCCCGTGGAAAACGCA",3,63.06,8.39,-2.44,0.13,2.82,1.07,0.01,">1 nonsynonymous","S43I K132Y T170V",3
"lib2","SARS-CoV-2","TCCCGTGTTAGGTACA",6,1.34,NA,NA,NA,NA,NA,NA,"stop","V37K Y123*",2
"lib2","SARS-CoV-2","TCCCGTTAACAGAATT",5,7.24,10.81,-0.02,0.07,2.96,1.07,0,"1 nonsynonymous","K114I",1
"lib2","SARS-CoV-2","TCCCGTTCCCACATTA",5,126.22,6.98,-3.85,0.24,1.5,1.11,0.01,">1 nonsynonymous","W106R Y175C",2
"lib2","SARS-CoV-2","TCCCGTTCTTAAACAA",1,13.69,9.25,-1.58,0.19,2.85,1.21,0.02,">1 nonsynonymous","Y119G P197M",2
"lib2","SARS-CoV-2","TCCCGTTCTTATATTT",8,54.87,8.15,-2.69,0.15,1.83,1.12,0.01,">1 nonsynonymous","D59P N118F",2
"lib2","SARS-CoV-2","TCCCGTTGGATAAAAC",7,60.96,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S19V G86A",2
"lib2","SARS-CoV-2","TCCCGTTTGGAAGTAC",6,80.76,10.91,0.07,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCCTAAAAAACGACG",1,18.09,10.46,-0.38,0.08,2.75,1.08,0,">1 nonsynonymous","G9V P149L",2
"lib2","SARS-CoV-2","TCCCTAAAACTTTTAA",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5W I88F",2
"lib2","SARS-CoV-2","TCCCTAAACGACTAAA",16,150.42,9.18,-1.66,0.13,1.7,1.12,0.01,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","TCCCTAAATCAAAAAG",2,57.28,10.66,-0.18,0.04,2.94,1.06,0,">1 nonsynonymous","S43A F160L",2
"lib2","SARS-CoV-2","TCCCTAAATCAAGAAT",3,60.21,9.62,-1.21,0.12,1.73,1.09,0.01,">1 nonsynonymous","R27M N40I R78L",3
"lib2","SARS-CoV-2","TCCCTAACGAGTGAAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9P N120L",2
"lib2","SARS-CoV-2","TCCCTAACGATAATTT",1,26.67,10.55,-0.28,0.09,2.88,1.15,0,">1 nonsynonymous","T55N G83F S129N I138L",4
"lib2","SARS-CoV-2","TCCCTAAGAAGTTTAA",6,53.86,10.85,0.01,0.08,2.86,1.16,0,"1 nonsynonymous","N40G",1
"lib2","SARS-CoV-2","TCCCTAAGTGGTAGCA",2,9.56,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K56V L95S",2
"lib2","SARS-CoV-2","TCCCTAATACTTACAA",9,137.31,10.23,-0.6,0.04,2.87,1.08,0,">1 nonsynonymous","N40T S129P V153L",3
"lib2","SARS-CoV-2","TCCCTAATATTGTGAA",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98C K114P P177Y L183R",4
"lib2","SARS-CoV-2","TCCCTACAAAACGATA",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59M V77Y F134Q",3
"lib2","SARS-CoV-2","TCCCTACAATGGATTG",8,44.69,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A42W G86R K94V S139N F185T",5
"lib2","SARS-CoV-2","TCCCTACAGCTCAAGT",11,212.52,10.03,-0.81,0.04,2.74,1.01,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","TCCCTACATAGTACGG",2,37.56,10.36,-0.47,0.11,2.45,1.17,0.01,">1 nonsynonymous","S41P V77M N171Y",3
"lib2","SARS-CoV-2","TCCCTACATTGAACGA",6,0.44,NA,NA,NA,NA,NA,NA,"stop","F8* L187Q",2
"lib2","SARS-CoV-2","TCCCTACGCGGCTAAA",9,36.41,6,-4.84,2,2.43,1.2,0.01,">1 nonsynonymous","D112G R136C I142D",3
"lib2","SARS-CoV-2","TCCCTACGTACTTTAA",9,0.57,NA,NA,NA,NA,NA,NA,"stop","F17L N40K P96*",3
"lib2","SARS-CoV-2","TCCCTAGAGGCCTGGA",1,23.2,10.81,-0.03,0.06,3,1,0,"1 nonsynonymous","Y143H",1
"lib2","SARS-CoV-2","TCCCTAGCAACTGTAT",8,165.72,10.09,-0.75,0.06,2.81,1.09,0,">1 nonsynonymous","S19T I28F A42G T100R K114C",5
"lib2","SARS-CoV-2","TCCCTAGCAGACCTAA",6,58.28,9.88,-0.96,0.08,1.99,1.12,0,">1 nonsynonymous","I28N Y39F",2
"lib2","SARS-CoV-2","TCCCTAGTATAATAAG",2,27.34,10.57,-0.27,0.06,2.9,1.04,0,">1 nonsynonymous","I104T T201R",2
"lib2","SARS-CoV-2","TCCCTATAATCCTCAT",4,73.2,9.29,-1.54,0.07,2.46,1.07,0,">1 nonsynonymous","L95C G174R H189N",3
"lib2","SARS-CoV-2","TCCCTATGGCAGCCAA",1,0.85,NA,NA,NA,NA,NA,NA,"stop","C61T N157*",2
"lib2","SARS-CoV-2","TCCCTCACGCGTCTCA",5,46.87,10.73,-0.11,0.07,2.93,1.11,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","TCCCTCATAAGTTAAT",3,0.32,NA,NA,NA,NA,NA,NA,"stop","F62V A145R R179S C195*",4
"lib2","SARS-CoV-2","TCCCTCCGACCAGGAG",11,142.39,10.58,-0.26,0.04,2.89,1.05,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TCCCTCCGACGAGGCA",12,114.59,10.74,-0.09,0.05,2.9,1.13,0,">1 nonsynonymous","Y35W D90Y",2
"lib2","SARS-CoV-2","TCCCTCCGCTCATATA",1,22.59,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S43P G51D L95S N120D",4
"lib2","SARS-CoV-2","TCCCTCCTATCAGTAA",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3P F99G S200K",3
"lib2","SARS-CoV-2","TCCCTCGCAGATGATA",3,19.01,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","L38I C61S I72E",3
"lib2","SARS-CoV-2","TCCCTCGCGACAAGTA",2,12.41,8.7,-2.14,0.14,2.79,1.02,0.01,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","TCCCTCTAAGACTAGT",6,29.44,7.79,-3.05,0.16,1.58,1.08,0.01,">1 nonsynonymous","D112N A192S T201S",3
"lib2","SARS-CoV-2","TCCCTCTTTAAGGAAA",3,15.43,9.07,-1.77,0.08,2.88,1.08,0,">1 nonsynonymous","G9L C61G T170A",3
"lib2","SARS-CoV-2","TCCCTGACCCTCTCAC",5,66.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L57R L95C",2
"lib2","SARS-CoV-2","TCCCTGAGACTTTATT",10,161.42,10.22,-0.62,0.03,2.75,1.06,0,">1 nonsynonymous","F44P Y66L",2
"lib2","SARS-CoV-2","TCCCTGCGTTTTAGTG",9,120.02,9.54,-1.3,0.06,2.78,1.08,0,">1 nonsynonymous","R16D F44S C61L F156L",4
"lib2","SARS-CoV-2","TCCCTGGGTTGACCAA",5,52.4,9.81,-1.02,0.06,2.82,1.09,0,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","TCCCTGTGATACCGCG",10,162.94,10.15,-0.68,0.03,2.88,1.04,0,">1 nonsynonymous","Y35K K56G",2
"lib2","SARS-CoV-2","TCCCTGTGATGTACTA",1,2.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S D90T D112V L122P T201M",5
"lib2","SARS-CoV-2","TCCCTGTGCTTACACA",1,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38M F44R T100A Q168I T201N",5
"lib2","SARS-CoV-2","TCCCTTACTAAACGTT",2,2.61,NA,NA,NA,NA,NA,NA,"stop","K87*",1
"lib2","SARS-CoV-2","TCCCTTACTCGGTTTC",1,40.49,9.82,-1.02,0.12,2.5,1.02,0.01,">1 nonsynonymous","V71T S129N P149T V173N",4
"lib2","SARS-CoV-2","TCCCTTCGATTTAAAA",13,193.73,9.41,-1.42,0.08,2.57,1.04,0,">1 nonsynonymous","C6E K87R E141L",3
"lib2","SARS-CoV-2","TCCCTTCGTTAAAATC",14,143.27,10.71,-0.12,0.03,2.99,1.02,0,">1 nonsynonymous","S45Q I138N T201I",3
"lib2","SARS-CoV-2","TCCCTTCTGTTTGTAG",1,7.47,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","A14F G51Q A145R C158V S184T",5
"lib2","SARS-CoV-2","TCCCTTGATAGCTGGG",4,86.23,10.74,-0.09,0.04,2.85,1.11,0,"1 nonsynonymous","C61S",1
"lib2","SARS-CoV-2","TCCCTTGTAAACACGT",3,36.38,7.59,-3.25,0.33,1.5,1.07,0.02,">1 nonsynonymous","T55G F167H",2
"lib2","SARS-CoV-2","TCCCTTTACGAGTTAC",8,32.82,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N107E P133R",2
"lib2","SARS-CoV-2","TCCCTTTAGTTACGCA",1,42.72,10.25,-0.59,0.04,2.95,1,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","TCCCTTTCATCGAACA",4,19.67,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","A33P F99S Y175T",3
"lib2","SARS-CoV-2","TCCCTTTCCGTGCTTC",9,30.26,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","Y21M G51S I88L E141F",4
"lib2","SARS-CoV-2","TCCCTTTGAAAGAAAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48R K128N S184H",3
"lib2","SARS-CoV-2","TCCCTTTGAACGCTGT",14,92.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5R G83P D112V R136T",4
"lib2","SARS-CoV-2","TCCCTTTGAGATGCCA",6,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V V32R Y165V",3
"lib2","SARS-CoV-2","TCCCTTTTACGCGCTA",7,117.39,10.86,0.02,0.06,2.89,1.1,0,"1 nonsynonymous","A18P",1
"lib2","SARS-CoV-2","TCCCTTTTGGCATCTA",14,110.21,6.19,-4.65,0.8,1.5,1.25,0.03,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","TCCGAAAAGTGTAGTG",9,123.36,10.02,-0.81,0.1,2.23,1.1,0,"1 nonsynonymous","S69H",1
"lib2","SARS-CoV-2","TCCGAAAATATCGCGC",8,68.72,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G51N Y93S K114F",3
"lib2","SARS-CoV-2","TCCGAAAATGCCCAAG",3,5.58,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","V77W V182L",2
"lib2","SARS-CoV-2","TCCGAAACACTGAATA",3,13.35,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C6F N92S D137A",3
"lib2","SARS-CoV-2","TCCGAAACCTTGTCAA",14,0.97,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCCGAAACGCCAACAG",7,1.74,NA,NA,NA,NA,NA,NA,"stop","S36* S147P",2
"lib2","SARS-CoV-2","TCCGAAAGACTAATCG",7,108.94,10.72,-0.12,0.03,2.98,1.03,0,">1 nonsynonymous","Y39N T201S",2
"lib2","SARS-CoV-2","TCCGAACACGCAAAAC",4,84.37,9.94,-0.89,0.04,2.51,1.03,0,">1 nonsynonymous","Y91S V115K",2
"lib2","SARS-CoV-2","TCCGAACCACTCTCGA",10,108.47,10.67,-0.17,0.03,2.93,1.03,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","TCCGAACCGTGGACGG",4,49.17,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V37R K56Q F99T E154M V180M A192C",6
"lib2","SARS-CoV-2","TCCGAACCTGGATGTA",3,0.81,NA,NA,NA,NA,NA,NA,"stop","T46N E135*",2
"lib2","SARS-CoV-2","TCCGAACGACAACCAC",1,9.87,6,-4.84,2,3,1.15,0.02,">1 nonsynonymous","G9W G86F Q168P",3
"lib2","SARS-CoV-2","TCCGAACGTACCGCGT",7,19.45,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3I V11I D59K G83V G146S C158Q Y175F",7
"lib2","SARS-CoV-2","TCCGAACTCACATGTA",2,10.01,10.85,0.02,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGAACTGCAGCCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59G K94A F126K",3
"lib2","SARS-CoV-2","TCCGAACTGCTCAGAA",10,0.62,NA,NA,NA,NA,NA,NA,"stop","G9R D34* A190T",3
"lib2","SARS-CoV-2","TCCGAAGATATTACCT",2,7.1,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","A33L S43I Q144L C158T A190Y",5
"lib2","SARS-CoV-2","TCCGAAGGGAAATTTT",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28V E141M L162Q",3
"lib2","SARS-CoV-2","TCCGAATAGACCTTAC",3,22.83,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","F44A G74T T85S N171D",4
"lib2","SARS-CoV-2","TCCGAATAGTCTAGTA",13,93.16,7.18,-3.66,0.23,1.5,1.09,0.01,">1 nonsynonymous","D34G N107M",2
"lib2","SARS-CoV-2","TCCGAATCCGTAGTCG",9,49.76,6.15,-4.69,0.36,2.3,1.17,0.01,">1 nonsynonymous","I2K G146S C158A K199I",4
"lib2","SARS-CoV-2","TCCGAATCTCACTTGA",1,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R Y119S",2
"lib2","SARS-CoV-2","TCCGAATGATAATGGA",2,81.38,9.46,-1.38,0.07,2.65,1.13,0,">1 nonsynonymous","L122W R179K",2
"lib2","SARS-CoV-2","TCCGAATGTTATACAT",10,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N S164E",2
"lib2","SARS-CoV-2","TCCGAATTACCTTCAG",4,5.97,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","TCCGAATTCTTATGAC",6,0,NA,NA,NA,NA,NA,NA,"stop","A33P G51* L111I Q176*",4
"lib2","SARS-CoV-2","TCCGACAAAAGCACTG",6,110.25,9.06,-1.78,0.03,2.98,1.04,0,"1 nonsynonymous","G117D",1
"lib2","SARS-CoV-2","TCCGACAACATATAGG",14,81.91,6.29,-4.55,0.74,1.5,1.23,0.03,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","TCCGACAACTGGATCC",1,45.31,9.65,-1.19,0.11,2.36,1.03,0,">1 nonsynonymous","I80V A89C V173N",3
"lib2","SARS-CoV-2","TCCGACAACTTTTACT",2,67.9,10.52,-0.32,0.03,2.97,1.02,0,"1 nonsynonymous","P191L",1
"lib2","SARS-CoV-2","TCCGACAAGTTGACAC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11G N40Q R78S R127E",4
"lib2","SARS-CoV-2","TCCGACAATATGTAAC",8,92.89,10.94,0.1,0.05,2.9,1.08,0,"1 nonsynonymous","V37A",1
"lib2","SARS-CoV-2","TCCGACACAAAAAGAA",9,54.27,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","D34Y Q79A A105L N107K L188K",5
"lib2","SARS-CoV-2","TCCGACACAGTTTTAA",7,174.08,8.89,-1.95,0.06,2.86,1.08,0,">1 nonsynonymous","V37W F44Y G174V F185L",4
"lib2","SARS-CoV-2","TCCGACACCTTCTTAA",2,33.82,10.84,0,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGACAGAACGCCCA",11,253.45,10.83,-0.01,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGACAGGAATAGAC",5,44.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99C",1
"lib2","SARS-CoV-2","TCCGACATGGCGACAT",2,5.82,6,-4.84,2,1.5,1.06,0.04,">1 nonsynonymous","F47G F62C I104T",3
"lib2","SARS-CoV-2","TCCGACCACTGGGTCC",10,124.52,10.64,-0.2,0.03,2.96,1,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","TCCGACGAAATAAGTG",3,29.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S36F K87N D137T",3
"lib2","SARS-CoV-2","TCCGACGCATCCGACA",1,6.83,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S45D G101A P161D Y175M",4
"lib2","SARS-CoV-2","TCCGACTACAAAAGGA",8,102.2,9.51,-1.32,0.05,2.89,1.09,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","TCCGACTAGGGTTTTA",14,70.69,6,-4.84,1.96,1.5,1.28,0.03,">1 nonsynonymous","S69F L95Q E141K",3
"lib2","SARS-CoV-2","TCCGACTTAAATGTAA",1,31.58,10.86,0.02,0.04,2.99,1.02,0,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","TCCGAGAAACTTATTC",8,107.13,9.87,-0.97,0.09,2.26,1.06,0,">1 nonsynonymous","I28T S200T",2
"lib2","SARS-CoV-2","TCCGAGACGAAGATTC",1,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q Y35S C158R",3
"lib2","SARS-CoV-2","TCCGAGATTACCTAGT",5,1.54,NA,NA,NA,NA,NA,NA,"stop","F12Y P96C N107T E135* V153P",5
"lib2","SARS-CoV-2","TCCGAGATTAGATGTG",2,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16T V71Q G116V K128S",4
"lib2","SARS-CoV-2","TCCGAGCAAAAACCCA",4,122.77,9.26,-1.58,0.06,2.54,1.03,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","TCCGAGCACGAATCTA",1,105.75,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G51I Q84T F167M K199S",4
"lib2","SARS-CoV-2","TCCGAGCCACTTCACA",1,0.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G74A",1
"lib2","SARS-CoV-2","TCCGAGCCCATGTTGT",2,13.61,10.08,-0.75,0.13,2.59,1,0.01,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","TCCGAGGTAGTATTAC",8,44.19,9.9,-0.94,0.09,2.61,1.09,0,">1 nonsynonymous","Y123S I138G",2
"lib2","SARS-CoV-2","TCCGAGGTTTTAAGAA",15,147.3,9.84,-1,0.11,2.24,1.09,0,">1 nonsynonymous","F44T T55S D90Y",3
"lib2","SARS-CoV-2","TCCGAGTACCATTCCC",3,1.71,NA,NA,NA,NA,NA,NA,"stop","F17R V37I L57* S69E L162Q S184A",6
"lib2","SARS-CoV-2","TCCGAGTATCCTGTAC",6,15.97,9.25,-1.58,0.24,1.53,1.08,0.03,">1 nonsynonymous","E10V Y123G",2
"lib2","SARS-CoV-2","TCCGAGTCTAAGGATT",5,64.8,6.12,-4.71,0.78,1.5,1.28,0.03,">1 nonsynonymous","W23P F167M P191I",3
"lib2","SARS-CoV-2","TCCGAGTGAGGATTGA",5,69.58,9.83,-1.01,0.04,2.84,1.15,0,"1 nonsynonymous","G146N",1
"lib2","SARS-CoV-2","TCCGAGTTAGACTGGG",3,8.31,NA,NA,NA,NA,NA,0.38,">1 nonsynonymous","C102R W106S N157S",3
"lib2","SARS-CoV-2","TCCGATAAAACGAACT",3,20.72,10.71,-0.12,0.06,2.92,1.07,0,">1 nonsynonymous","T46Y K199M",2
"lib2","SARS-CoV-2","TCCGATAGACACTGTA",7,0.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K C61I Q84R T148N",4
"lib2","SARS-CoV-2","TCCGATATGGAATCGT",1,10.17,10.42,-0.42,0.21,2.83,1,0.03,">1 nonsynonymous","V32C A145S K199D",3
"lib2","SARS-CoV-2","TCCGATATTTACTTTC",2,18.91,10.92,0.08,0.11,2.92,1.03,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","TCCGATCCCAATCAAC",17,236.63,10.67,-0.16,0.03,2.96,1.02,0,">1 nonsynonymous","P149I K199L",2
"lib2","SARS-CoV-2","TCCGATCTCGGATACT",4,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76G P149M Y159L F185L T201C",5
"lib2","SARS-CoV-2","TCCGATCTGTATCCTT",5,48.52,9.54,-1.29,0.13,1.87,1.1,0.01,">1 nonsynonymous","W23R N64A",2
"lib2","SARS-CoV-2","TCCGATGAACATTATT",1,29.66,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A14G D68R G86I N118L N130V",5
"lib2","SARS-CoV-2","TCCGATGAACTTATGT",4,2.1,NA,NA,NA,NA,NA,NA,"stop","C61* G86N V115R",3
"lib2","SARS-CoV-2","TCCGATGACATGTGCG",3,85.81,10.65,-0.19,0.02,2.91,1.07,0,">1 nonsynonymous","R16A D90S",2
"lib2","SARS-CoV-2","TCCGATGACCTACCGC",4,20.41,10.77,-0.07,0.07,2.88,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGATGATCCGCTAG",1,29.34,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","F12C C61F Y159W Y175E",4
"lib2","SARS-CoV-2","TCCGATGCACGGTACT",11,269.68,9.32,-1.51,0.07,2.7,1.1,0,">1 nonsynonymous","T3P R73P",2
"lib2","SARS-CoV-2","TCCGATGCTTTACAGT",3,9.1,NA,NA,NA,NA,NA,NA,"stop","V32* Q84L K114D K128L",4
"lib2","SARS-CoV-2","TCCGATGGGTAAGTCT",8,221.25,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16N V103I V115D P149I Q176S F185S",6
"lib2","SARS-CoV-2","TCCGATTATCCTATTC",1,2.2,NA,NA,NA,NA,NA,NA,"stop","F44L I72K T201*",3
"lib2","SARS-CoV-2","TCCGCAAAAGCAGCAA",2,18.01,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C6D A42S P54G V103I R124C",5
"lib2","SARS-CoV-2","TCCGCAAACACAAAGT",10,212.62,10.24,-0.59,0.03,2.87,1,0,">1 nonsynonymous","Y35D V52I",2
"lib2","SARS-CoV-2","TCCGCAACATGCAACT",9,163.35,10.24,-0.6,0.04,2.85,1.05,0,"1 nonsynonymous","L57E",1
"lib2","SARS-CoV-2","TCCGCAATATCAGACC",5,33.14,6.94,-3.89,0.37,1.5,1.15,0.02,">1 nonsynonymous","C61A L131H P149R T201P",4
"lib2","SARS-CoV-2","TCCGCAATGTTCCGCG",5,127.32,9.65,-1.18,0.04,2.98,1.05,0,"1 nonsynonymous","G166V",1
"lib2","SARS-CoV-2","TCCGCACAAACTCTCC",11,176.31,8.79,-2.05,0.1,2.28,1.06,0,">1 nonsynonymous","N107H N130I",2
"lib2","SARS-CoV-2","TCCGCACAACGTTAAG",5,87.4,10.72,-0.12,0.03,2.92,1.07,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","TCCGCACAGCCAACTA",8,80.21,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6W A22Q D112I V115A R124C K132H S139Y",7
"lib2","SARS-CoV-2","TCCGCACTAAAAATAA",2,33.96,10.68,-0.15,0.06,2.89,1.13,0,"1 nonsynonymous","I72L",1
"lib2","SARS-CoV-2","TCCGCACTCACATGTG",3,4.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y G101Q V115L",3
"lib2","SARS-CoV-2","TCCGCAGACTATAATT",7,58.73,10.74,-0.09,0.08,2.8,1.09,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","TCCGCAGCATGATTGT",9,1.12,NA,NA,NA,NA,NA,NA,"stop","S129L Y165*",2
"lib2","SARS-CoV-2","TCCGCAGTCCGAAGTA",7,49.7,10.42,-0.42,0.08,2.93,1.04,0,">1 nonsynonymous","T100A H189M",2
"lib2","SARS-CoV-2","TCCGCCAAACCTTATA",6,77.05,9.42,-1.42,0.09,2.68,1.08,0,">1 nonsynonymous","L5P Y165I",2
"lib2","SARS-CoV-2","TCCGCCAACACATTAC",4,56.15,6,-4.84,2,1.5,1.33,0.06,">1 nonsynonymous","I2V V20S K56V T100H S139G",5
"lib2","SARS-CoV-2","TCCGCCAACTAACAGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R Y91L G101N",3
"lib2","SARS-CoV-2","TCCGCCATATCCAACC",9,123.01,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","S139A C150Y",2
"lib2","SARS-CoV-2","TCCGCCATCATCTAAT",3,9.32,6.01,-4.83,2,3,1.04,0,">1 nonsynonymous","G83P G146T",2
"lib2","SARS-CoV-2","TCCGCCCAGAATTCAA",4,82.54,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D59L L162A",2
"lib2","SARS-CoV-2","TCCGCCCATCCATGCA",6,45.76,6,-4.84,2,3,1.22,0,">1 nonsynonymous","C49Y Y175V",2
"lib2","SARS-CoV-2","TCCGCCCCCTCATCAA",5,0.06,NA,NA,NA,NA,NA,NA,"stop","S36E F99S Q144*",3
"lib2","SARS-CoV-2","TCCGCCCGCACACACT",8,234.07,8.4,-2.43,0.07,2.46,1.05,0,">1 nonsynonymous","N40T G146V",2
"lib2","SARS-CoV-2","TCCGCCGAAACTCAAT",1,74.52,10.87,0.04,0.05,2.96,1.05,0,">1 nonsynonymous","G9S N130T",2
"lib2","SARS-CoV-2","TCCGCCGACGCTCACT",6,0,NA,NA,NA,NA,NA,NA,"stop","N4S N13* T201G",3
"lib2","SARS-CoV-2","TCCGCCGCGACATACT",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V K87L K94A N120T C158D E186D",6
"lib2","SARS-CoV-2","TCCGCCTAAAACAAAG",4,98.85,8.64,-2.19,0.07,2.61,1.05,0,">1 nonsynonymous","G116S Q176A",2
"lib2","SARS-CoV-2","TCCGCCTGAGCCAATT",11,193.25,10.79,-0.05,0.04,2.95,1.05,0,">1 nonsynonymous","E141S T201Q",2
"lib2","SARS-CoV-2","TCCGCCTTAATGCAAT",2,30.14,10.72,-0.11,0.08,2.93,1.09,0,"1 nonsynonymous","S41M",1
"lib2","SARS-CoV-2","TCCGCGAATTGCATGA",8,68.5,9.24,-1.59,0.05,2.87,1.15,0,">1 nonsynonymous","N64L Y119G",2
"lib2","SARS-CoV-2","TCCGCGACGAAGATTT",1,7.69,6,-4.84,2,1.5,1.04,0.03,">1 nonsynonymous","C6K G83F D98H E141T F156C C158Y",6
"lib2","SARS-CoV-2","TCCGCGACGCCGAATA",2,7.4,9.65,-1.19,0.24,2.44,1.11,0.02,">1 nonsynonymous","D97L N107K S147Q",3
"lib2","SARS-CoV-2","TCCGCGAGCCCAATAT",4,75.1,6,-4.84,0.77,1.5,1.18,0.01,">1 nonsynonymous","Y91N Q176T T201K",3
"lib2","SARS-CoV-2","TCCGCGATACAATGCC",8,82.33,9.82,-1.02,0.13,2.03,1.06,0.01,">1 nonsynonymous","N24T R136L E186A",3
"lib2","SARS-CoV-2","TCCGCGCAATATCCCC",4,35.83,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","R27S P96H R136H C158S",4
"lib2","SARS-CoV-2","TCCGCGCCTAAATTGA",7,1.19,NA,NA,NA,NA,NA,NA,"stop","G9N G117K F126*",3
"lib2","SARS-CoV-2","TCCGCGGTGAGCAAAG",4,48.36,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A18V D112G",2
"lib2","SARS-CoV-2","TCCGCTAAGATCCCAT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","Y39* C61G R124N I142K Y165V",5
"lib2","SARS-CoV-2","TCCGCTAAGGTCGAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* S41K D59R V71L Q84E W106V V173T",7
"lib2","SARS-CoV-2","TCCGCTAGCACTCAAT",6,45.25,10.6,-0.24,0.04,2.92,1.1,0,">1 nonsynonymous","G155S H189Q",2
"lib2","SARS-CoV-2","TCCGCTATTAGCCTCA",2,35.71,9.99,-0.85,0.06,3,1,0,"1 nonsynonymous","F156T",1
"lib2","SARS-CoV-2","TCCGCTCACCACGGCT",4,14.63,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L5D T63E Y91N G101Y K198A",5
"lib2","SARS-CoV-2","TCCGCTGATAATCACA",5,24.19,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","C6Q V52S C61G L131G Y165P",5
"lib2","SARS-CoV-2","TCCGCTGCATCTACGT",6,84.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D A81G N130R",3
"lib2","SARS-CoV-2","TCCGCTGTAATCCTCA",3,40.13,10.82,-0.02,0.05,2.84,1.11,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","TCCGCTTATAGATGTG",5,71.74,10.81,-0.02,0.04,2.97,1.03,0,"1 nonsynonymous","N4A",1
"lib2","SARS-CoV-2","TCCGCTTCGGAGGTAA",2,7.63,6,-4.84,2,3,1.29,0.01,">1 nonsynonymous","N40W L60I P82T N92K D112M",5
"lib2","SARS-CoV-2","TCCGCTTGCCAGTATA",4,2.13,NA,NA,NA,NA,NA,NA,"stop","K94* G116L G155R",3
"lib2","SARS-CoV-2","TCCGCTTTGCAGGTTA",5,32.53,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C6N N64R A89V F99A N151F",5
"lib2","SARS-CoV-2","TCCGGAAACAATTGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y66* F99T A105S N120R F156L Q168A",6
"lib2","SARS-CoV-2","TCCGGAAGCAAAAGCA",7,2.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34P C61Y Y93R S129K I142D",5
"lib2","SARS-CoV-2","TCCGGAATCGCGATAG",9,33.73,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","G101V N107A S129T",3
"lib2","SARS-CoV-2","TCCGGAATTGAAGTCT",6,54.36,10.91,0.08,0.07,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGGACATAAAGAAT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84W",1
"lib2","SARS-CoV-2","TCCGGACGCGGGATAG",4,117.22,10.17,-0.67,0.03,3,1.01,0,">1 nonsynonymous","K87V F134E G152E T201M",4
"lib2","SARS-CoV-2","TCCGGACGCTATAACA",5,3.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15E E76Y L95G I142F",4
"lib2","SARS-CoV-2","TCCGGACTACTCCAAA",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L E10L I28Y L38K Y93S T100K I104M",7
"lib2","SARS-CoV-2","TCCGGACTTATCTGCC",7,150.4,10.89,0.05,0.04,2.97,1.05,0,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","TCCGGAGCAGTAAAAC",3,28.42,10.8,-0.04,0.06,2.81,1.2,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","TCCGGAGTCAGTGATT",5,88.25,8.66,-2.18,0.07,2.6,1.02,0,">1 nonsynonymous","I2K T63V Y119S R136C T201Y",5
"lib2","SARS-CoV-2","TCCGGATATCTCTCGG",7,144.18,10.64,-0.2,0.03,2.96,1.03,0,"1 nonsynonymous","S139H",1
"lib2","SARS-CoV-2","TCCGGATATTCAGTAT",2,30.97,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L38I V71A R127L",3
"lib2","SARS-CoV-2","TCCGGATCCTTAGTAG",7,52.31,6,-4.84,1.18,1.5,1.12,0.01,">1 nonsynonymous","N58I L95T F156G",3
"lib2","SARS-CoV-2","TCCGGCAGTACCTGTA",4,3,NA,NA,NA,NA,NA,NA,"stop","W23S K56G P149* F156P",4
"lib2","SARS-CoV-2","TCCGGCCAAACTTGAA",11,5.2,NA,NA,NA,NA,NA,NA,"stop","G9R V32N P54* T63G S69M E76N G86C T148G Q176S",9
"lib2","SARS-CoV-2","TCCGGCCCGAAAATAA",1,3.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L N120L V153K",3
"lib2","SARS-CoV-2","TCCGGCCTCCCTATGC",4,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2E D34P L95T Y121L",4
"lib2","SARS-CoV-2","TCCGGCGTAAACTGTG",7,75.16,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P54C R179T",2
"lib2","SARS-CoV-2","TCCGGCTCTTGAAACA",5,0.3,NA,NA,NA,NA,NA,NA,"stop","T15* T55G K199T",3
"lib2","SARS-CoV-2","TCCGGCTTAGTACTAC",4,50.99,7.36,-3.48,0.29,1.5,1.14,0.02,">1 nonsynonymous","A105P V173K",2
"lib2","SARS-CoV-2","TCCGGGAAACCCCCTC",1,20.13,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14S L60T L95R",3
"lib2","SARS-CoV-2","TCCGGGACGGTTCGCC",4,107.11,8.67,-2.17,0.07,3,1.06,0,">1 nonsynonymous","N64P T100K T170D",3
"lib2","SARS-CoV-2","TCCGGGCCACGCACAG",9,30.14,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","W23P F167H V182D",3
"lib2","SARS-CoV-2","TCCGGGGTAAAGTGGG",10,1.97,NA,NA,NA,NA,NA,NA,"stop","F134I T148S Y175*",3
"lib2","SARS-CoV-2","TCCGGTAACACAAGTG",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85N N92E N107C S184L",4
"lib2","SARS-CoV-2","TCCGGTAACCCTAGTG",6,1.23,NA,NA,NA,NA,NA,NA,"stop","F8* T148K",2
"lib2","SARS-CoV-2","TCCGGTAATGATTATA",5,34.63,9.74,-1.1,0.07,1.88,1.09,0,">1 nonsynonymous","V11S S41V",2
"lib2","SARS-CoV-2","TCCGGTATGCGCTTCT",3,16.96,8.79,-2.05,0.25,1.5,1.22,0.03,">1 nonsynonymous","L5G N40I C49W S200L",4
"lib2","SARS-CoV-2","TCCGGTATGCTTCAGG",3,112.6,10.84,0,0.06,2.91,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCGGTCCACACTATG",2,41.31,6,-4.84,1.76,1.5,1.14,0.01,">1 nonsynonymous","E10V G86Q G196R",3
"lib2","SARS-CoV-2","TCCGGTGGGGACAATG",2,53.06,10.15,-0.69,0.1,2.36,1.01,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","TCCGGTGTCGCCTTAA",8,41.27,6,-4.84,2,1.5,1.18,0.01,"1 nonsynonymous","V182K",1
"lib2","SARS-CoV-2","TCCGGTGTCTTCTACA",3,13.88,9.86,-0.98,0.09,2.68,1,0.01,">1 nonsynonymous","N13L E141S",2
"lib2","SARS-CoV-2","TCCGGTGTGAAGCAAA",3,1.01,NA,NA,NA,NA,NA,NA,"stop","D59C N118*",2
"lib2","SARS-CoV-2","TCCGGTTAACCAATAA",2,10.66,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D68V A190S K199M",3
"lib2","SARS-CoV-2","TCCGGTTACTTATCGG",1,11.49,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","T63G L95P A105V N151D",4
"lib2","SARS-CoV-2","TCCGGTTCACTCCCAC",13,224.27,9.13,-1.7,0.05,2.84,1.12,0,">1 nonsynonymous","T3S T63K G117K",3
"lib2","SARS-CoV-2","TCCGGTTGAGCATCTG",2,2.09,NA,NA,NA,NA,NA,NA,"stop","V52C V77W G86L Y175*",4
"lib2","SARS-CoV-2","TCCGTAAAATGAATGC",6,147.66,10.86,0.03,0.05,2.96,1.06,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","TCCGTAAACTTACTCA",3,29.63,10.65,-0.18,0.05,2.99,1.04,0,">1 nonsynonymous","N4Y F8L A33F",3
"lib2","SARS-CoV-2","TCCGTAACGCTTCTGA",3,36.31,10.55,-0.29,0.03,2.92,1.07,0,">1 nonsynonymous","T15I K198R",2
"lib2","SARS-CoV-2","TCCGTAACTAGAGGTA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","P7S S41* G74Q G83V R124Q",5
"lib2","SARS-CoV-2","TCCGTAACTTTGCATT",3,0.2,NA,NA,NA,NA,NA,NA,"stop","L38* D98H F185I",3
"lib2","SARS-CoV-2","TCCGTAAGGGAATAAT",6,45.24,10.76,-0.08,0.05,2.79,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGTAATTCGCATAG",4,20.9,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","R27S G86T G146S G174Y",4
"lib2","SARS-CoV-2","TCCGTACATTAAAACT",7,84.17,8.58,-2.25,0.11,1.69,1.12,0,">1 nonsynonymous","F8V A14H S45R K56Q F62V G174M",6
"lib2","SARS-CoV-2","TCCGTACCAAGCAGCT",8,81.87,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F47D K94A Y178R",3
"lib2","SARS-CoV-2","TCCGTACGGTCTTACC",1,0.37,NA,NA,NA,NA,NA,NA,"stop","S53C G86D K94*",3
"lib2","SARS-CoV-2","TCCGTACTCAATATAT",11,235.78,10.78,-0.06,0.03,2.91,1.04,0,">1 nonsynonymous","D59T D97V",2
"lib2","SARS-CoV-2","TCCGTACTGGACTGAA",5,36.84,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4Q K94S F99P",3
"lib2","SARS-CoV-2","TCCGTAGAATGGATCA",5,2.58,NA,NA,NA,NA,NA,NA,"stop","T3R F12* Y39T",3
"lib2","SARS-CoV-2","TCCGTAGATTTGATAT",4,78.71,8.41,-2.43,0.1,1.62,1.14,0,">1 nonsynonymous","L57N N107R",2
"lib2","SARS-CoV-2","TCCGTAGCGTTATTAT",1,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107C F134L P169W",3
"lib2","SARS-CoV-2","TCCGTCAAGTCATGCC",1,49.08,10.81,-0.03,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGTCACCATTACAC",5,6.59,NA,NA,NA,NA,NA,NA,"stop","I88M D98E P149K V153N P169*",5
"lib2","SARS-CoV-2","TCCGTCAGATTAAGCG",1,27.62,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","K94P V115G",2
"lib2","SARS-CoV-2","TCCGTCCACATACTCC",10,99.54,10.2,-0.63,0.05,2.76,1.04,0,">1 nonsynonymous","Y35S F44G F134H",3
"lib2","SARS-CoV-2","TCCGTCCACCCGAAGG",9,58.25,8.53,-2.3,0.14,1.89,1.07,0.01,">1 nonsynonymous","C6K V20A",2
"lib2","SARS-CoV-2","TCCGTCCCTACTCAGT",5,82.35,9.98,-0.86,0.05,2.52,1.03,0,">1 nonsynonymous","N40K D98F N151T",3
"lib2","SARS-CoV-2","TCCGTCCTGCGCAACG",4,45.32,10.81,-0.02,0.08,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGTCGCTCAGTAAC",6,103.32,10.77,-0.06,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGTCTGCTCGTTCA",4,57.51,6.25,-4.59,0.59,1.5,1.18,0.02,">1 nonsynonymous","L5T D90P",2
"lib2","SARS-CoV-2","TCCGTCTTTTTAGATG",10,109.25,9.06,-1.77,0.1,1.5,1.09,0,">1 nonsynonymous","T3C R73K Y123I N171A",4
"lib2","SARS-CoV-2","TCCGTGCACATCACGT",3,75.98,10,-0.84,0.07,2.19,1.04,0,">1 nonsynonymous","K56Q W106H",2
"lib2","SARS-CoV-2","TCCGTGCACGTTATCA",5,106.15,10.76,-0.07,0.04,2.9,1.09,0,">1 nonsynonymous","V37Q R78Y D90N",3
"lib2","SARS-CoV-2","TCCGTGCTTACGACAC",4,83.69,10.08,-0.76,0.06,2.7,1.04,0,">1 nonsynonymous","I138W E186S",2
"lib2","SARS-CoV-2","TCCGTGGCGCGCTAGC",6,18.09,6.67,-4.17,0.43,1.5,1.02,0.05,">1 nonsynonymous","V103A R127L",2
"lib2","SARS-CoV-2","TCCGTGTGAACGACAC",2,42.36,10.39,-0.44,0.05,2.97,1.04,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","TCCGTTAAGGTCCTAG",12,234.61,9.36,-1.47,0.03,2.96,1.08,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TCCGTTAATAAGACGC",2,33.09,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L95G V181L K198S",3
"lib2","SARS-CoV-2","TCCGTTACTCCAAAAT",5,75.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96H N107K",2
"lib2","SARS-CoV-2","TCCGTTAGAAAGCAAA",10,48.66,10.77,-0.07,0.08,2.8,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCGTTAGACCAAGCC",4,68.73,10.54,-0.3,0.05,2.97,1.03,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TCCGTTAGGTCACTCC",2,93.34,8.27,-2.56,0.13,2.24,1.16,0.01,">1 nonsynonymous","Y119E K128E R136T",3
"lib2","SARS-CoV-2","TCCGTTCGCTTACGGT",3,46.08,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y21P T63N Y93F T100A",4
"lib2","SARS-CoV-2","TCCGTTCTCTGAGACC",3,0.21,NA,NA,NA,NA,NA,NA,"stop","N30*",1
"lib2","SARS-CoV-2","TCCGTTCTTTGATCAA",3,73.84,10.89,0.06,0.05,2.95,1.07,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","TCCGTTGAAAATGAAT",8,36.06,8.61,-2.23,0.2,1.88,1.09,0.01,">1 nonsynonymous","G83D G166F",2
"lib2","SARS-CoV-2","TCCGTTGAAGTTAAAC",2,17.84,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Y35K A67D D68R N107M",4
"lib2","SARS-CoV-2","TCCGTTGACAAGCGGT",4,7.63,NA,NA,NA,NA,NA,NA,"stop","T3R G9N A14M P82V N130S P149L Y178P A190*",8
"lib2","SARS-CoV-2","TCCGTTGATATTAACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","A33Y V52* K56R T201K",4
"lib2","SARS-CoV-2","TCCGTTGGCACTTAAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14M I28A Y91F I104F Y119I T148H V180S T201L",8
"lib2","SARS-CoV-2","TCCGTTGTACCGCCTA",12,149.3,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","F70T G86T G166Q H189Y",4
"lib2","SARS-CoV-2","TCCGTTTAACGGACAA",2,14.66,8.71,-2.12,0.35,1.5,1,0.05,">1 nonsynonymous","A14E G86H",2
"lib2","SARS-CoV-2","TCCGTTTCACGACGCG",3,46.53,9.28,-1.56,0.15,1.73,1.05,0.01,"1 nonsynonymous","W23R",1
"lib2","SARS-CoV-2","TCCGTTTTAAGGCAAG",4,144.95,10.76,-0.07,0.03,2.95,1.06,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","TCCGTTTTATTGAATG",5,88.54,10.39,-0.45,0.06,2.93,1.07,0,">1 nonsynonymous","D34C S200L",2
"lib2","SARS-CoV-2","TCCTAAAAAACCATGA",1,54.08,9.38,-1.45,0.06,2.89,1.11,0,">1 nonsynonymous","Y119D S147Y",2
"lib2","SARS-CoV-2","TCCTAAAAACCATGCA",6,76.23,7.4,-3.44,0.19,1.5,1.08,0.01,">1 nonsynonymous","T3H F126D S164C K198Q",4
"lib2","SARS-CoV-2","TCCTAAAACACTATGA",3,20.86,7.8,-3.03,0.3,1.5,1.19,0.04,">1 nonsynonymous","L5R A14Y W106T P197D",4
"lib2","SARS-CoV-2","TCCTAAAACAGTAATA",6,0.15,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCCTAAAACCCATTTC",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57A L95Y",2
"lib2","SARS-CoV-2","TCCTAAAACTTACTTA",2,0.05,NA,NA,NA,NA,NA,NA,"stop","N13* S45I",2
"lib2","SARS-CoV-2","TCCTAAAAGATATCTC",6,53.37,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","A81Y Y121F L162D",3
"lib2","SARS-CoV-2","TCCTAAAATAATACAA",9,116.84,10.69,-0.14,0.06,2.94,1.06,0,"1 nonsynonymous","L183I",1
"lib2","SARS-CoV-2","TCCTAAACCTAGCACC",9,204.48,8.41,-2.43,0.11,2.81,1.07,0,">1 nonsynonymous","S41G G166F",2
"lib2","SARS-CoV-2","TCCTAAAGACGAAACT",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A R136G G146Y L162V",4
"lib2","SARS-CoV-2","TCCTAAAGATATATCA",2,83.37,10.19,-0.64,0.05,2.79,1.07,0,">1 nonsynonymous","D98R P133S",2
"lib2","SARS-CoV-2","TCCTAAATAACGAATT",3,48.12,10.75,-0.09,0.09,2.81,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCTAACAGCAACCCA",3,8.46,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","V103L C150E V173F",3
"lib2","SARS-CoV-2","TCCTAACATGCTAACT",10,217.32,10.8,-0.03,0.04,2.84,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCTAACGTTTTTTCT",10,108.66,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L122P G174Q R179S",3
"lib2","SARS-CoV-2","TCCTAACTCCAGCATA",12,228.18,10.43,-0.4,0.03,2.91,1.07,0,">1 nonsynonymous","T15V C61S",2
"lib2","SARS-CoV-2","TCCTAACTTTTTCTAT",2,2.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97T V182K",2
"lib2","SARS-CoV-2","TCCTAAGAATTGGAAT",21,319.15,10.84,0.01,0.04,2.91,1.09,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","TCCTAAGAGACTTTGA",2,0.45,NA,NA,NA,NA,NA,NA,"stop","R25V D34Y N107L V115*",4
"lib2","SARS-CoV-2","TCCTAAGGAAAAAAGC",3,26.49,9.75,-1.08,0.1,2.45,1.04,0,">1 nonsynonymous","N4M A81V I138E",3
"lib2","SARS-CoV-2","TCCTAAGGTTAGTCCC",3,81.31,8.18,-2.66,0.22,1.7,1.08,0.02,">1 nonsynonymous","E76M T170V",2
"lib2","SARS-CoV-2","TCCTAAGTGCCACGCT",2,11.34,7.67,-3.16,0.49,1.5,1.22,0.05,">1 nonsynonymous","Y93L P149R",2
"lib2","SARS-CoV-2","TCCTAATCATCCGCAT",1,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16V T55V L60R V115A",4
"lib2","SARS-CoV-2","TCCTAATCCATTCAAA",4,0,NA,NA,NA,NA,NA,NA,"stop","S43* D112G",2
"lib2","SARS-CoV-2","TCCTAATGAAAGACTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6G G83R A89* P149H E154P",5
"lib2","SARS-CoV-2","TCCTAATGGGGCCAGT",2,6.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49R P54A C61L I80H L95M",5
"lib2","SARS-CoV-2","TCCTAATTATGGAAAG",1,22.4,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G9R N24I G83E V103S G116R",5
"lib2","SARS-CoV-2","TCCTAATTCTCTATGA",6,126.29,10.82,-0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCTACACCTGGGTTG",2,16.39,6.05,-4.79,0.41,3,1.11,0,">1 nonsynonymous","S43F I80F I88Q L122A",4
"lib2","SARS-CoV-2","TCCTACAGGTTAGCAA",3,14.5,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","G86Y S200C",2
"lib2","SARS-CoV-2","TCCTACATATAAATCT",4,112.64,10.58,-0.25,0.03,2.91,1.05,0,">1 nonsynonymous","A18P L60Q P96N",3
"lib2","SARS-CoV-2","TCCTACATTTGAAAGC",2,13.81,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L5A V37K S43G A105R",4
"lib2","SARS-CoV-2","TCCTACCAAGAACTGC",4,0.94,NA,NA,NA,NA,NA,NA,"stop","T55E T201*",2
"lib2","SARS-CoV-2","TCCTACCCAATTGCTG",5,129.98,10.4,-0.44,0.05,2.93,1.07,0,">1 nonsynonymous","D98S F156R",2
"lib2","SARS-CoV-2","TCCTACCGACATTCGC",1,2.6,NA,NA,NA,NA,NA,NA,"stop","N13* C61S C102S Q168C",4
"lib2","SARS-CoV-2","TCCTACCTAACCGAAA",3,27.76,6,-4.84,2,3,1.23,0,">1 nonsynonymous","F99A Y123W T170C",3
"lib2","SARS-CoV-2","TCCTACCTACGGTTCC",15,5.6,NA,NA,NA,NA,NA,NA,"stop","W106* F160S",2
"lib2","SARS-CoV-2","TCCTACCTTTCACATC",14,3.5,NA,NA,NA,NA,NA,NA,"stop","C6* T15V Y21V Y39S C158K Q168E",6
"lib2","SARS-CoV-2","TCCTACGACCACTCTC",11,130.71,10.54,-0.29,0.03,2.92,1.02,0,">1 nonsynonymous","T15P K94R S147A K198T",4
"lib2","SARS-CoV-2","TCCTACGATTAATCGT",16,146.28,6.15,-4.69,0.47,1.7,1.15,0.01,">1 nonsynonymous","G86A G152I",2
"lib2","SARS-CoV-2","TCCTACGGATTGTTCT",3,220.84,10.72,-0.11,0.03,2.92,1.09,0,">1 nonsynonymous","S41D P149Y",2
"lib2","SARS-CoV-2","TCCTACTACTCTAATA",8,87.47,10.78,-0.06,0.14,2.72,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCCTACTATCCTACCG",2,0.7,NA,NA,NA,NA,NA,NA,"stop","N1D F17E N40S Q144V V173H V180*",6
"lib2","SARS-CoV-2","TCCTACTCGCTTGACC",1,7.4,10.77,-0.06,0.1,2.96,1.07,0,"1 nonsynonymous","V32K",1
"lib2","SARS-CoV-2","TCCTACTCTCGAGATT",1,39.73,10.57,-0.26,0.07,2.91,1.07,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","TCCTACTTGACGACCT",5,1.4,NA,NA,NA,NA,NA,NA,"stop","T85* A105* Y121D S129T",4
"lib2","SARS-CoV-2","TCCTAGAACAATTGAT",2,25.64,9.76,-1.08,0.12,1.94,1.11,0,">1 nonsynonymous","T15L D97T P133G",3
"lib2","SARS-CoV-2","TCCTAGAATCTTCTAC",9,48.48,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L57N D68T G101P T148N",4
"lib2","SARS-CoV-2","TCCTAGACGACCAACT",5,76.3,10.84,0,0.06,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCTAGACTCGACTCC",4,47.61,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35C L122G G146P P169M",4
"lib2","SARS-CoV-2","TCCTAGAGGAACTGCG",2,12.7,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","L60R F99R A105Y Y165L E186D",5
"lib2","SARS-CoV-2","TCCTAGAGTTCATATA",9,178.81,10.28,-0.56,0.04,2.85,1.03,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","TCCTAGATGTATAATC",6,3.1,NA,NA,NA,NA,NA,NA,"stop","P7W V20W I28L Q144C Y175*",5
"lib2","SARS-CoV-2","TCCTAGATTCCGGTCT",22,33.62,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","F44D C49S D137K G146K F185N",5
"lib2","SARS-CoV-2","TCCTAGCAAACATGAC",2,59.83,10.86,0.03,0.06,2.95,1.04,0,"1 nonsynonymous","I72L",1
"lib2","SARS-CoV-2","TCCTAGCACTAATCCC",6,122.91,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R16L C61D I72T T85S C102S N120S N157G V173L A192S",9
"lib2","SARS-CoV-2","TCCTAGCCGAAATTAC",4,21.45,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","A14T Y35G N58L T85C Y93I G116H G155V L162F T201C",9
"lib2","SARS-CoV-2","TCCTAGCCGCGTATCG",11,160.05,9.22,-1.62,0.04,2.93,1.05,0,">1 nonsynonymous","S29Y Y119V",2
"lib2","SARS-CoV-2","TCCTAGCCTACTTTAC",3,15.63,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","I88W K198S",2
"lib2","SARS-CoV-2","TCCTAGCTCGTTTTAC",6,24.81,6,-4.84,2,1.5,1.28,0.06,">1 nonsynonymous","D90T V103Y T201R",3
"lib2","SARS-CoV-2","TCCTAGGAAACAGGCT",6,56.91,10.7,-0.14,0.09,2.74,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCTAGGCAGCCCCAC",16,222.99,10.42,-0.41,0.03,2.91,1.06,0,">1 nonsynonymous","I2S A33T L38F",3
"lib2","SARS-CoV-2","TCCTAGGGATCTGATC",8,89.42,9.44,-1.39,0.1,1.89,1.02,0,">1 nonsynonymous","K132S P149F F160I S184H K198Q",5
"lib2","SARS-CoV-2","TCCTAGTAGTAAAGAC",4,41.25,10.57,-0.27,0.1,2.79,1.2,0.01,"1 nonsynonymous","G116T",1
"lib2","SARS-CoV-2","TCCTAGTCCGTATGAA",3,105.26,10.53,-0.3,0.05,2.83,1,0,">1 nonsynonymous","L5E N13D Q168W",3
"lib2","SARS-CoV-2","TCCTAGTGAGACGGCC",3,152.29,10.17,-0.67,0.04,2.85,1.03,0,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","TCCTATAAAATCCCCT",8,97.75,10.35,-0.48,0.04,2.96,1.02,0,"1 nonsynonymous","G174K",1
"lib2","SARS-CoV-2","TCCTATAAACCGAAAA",21,200.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32F W106C Q144T",3
"lib2","SARS-CoV-2","TCCTATAACCAAGAAG",4,43.58,10.71,-0.12,0.05,2.79,1.23,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","TCCTATAAGCGCATAT",6,54.51,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","D59P V71T L95P R136F",4
"lib2","SARS-CoV-2","TCCTATAATCAGATGC",5,37.93,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","A14V V71G",2
"lib2","SARS-CoV-2","TCCTATACGAGGACAA",3,11.21,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23I D97L L125H",3
"lib2","SARS-CoV-2","TCCTATACGTACTTGG",2,12.59,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D68N Y119R",2
"lib2","SARS-CoV-2","TCCTATATGTTAAACC",1,18.66,10.8,-0.04,0.07,2.92,1.1,0,"1 nonsynonymous","I142V",1
"lib2","SARS-CoV-2","TCCTATCCAGAACCAA",10,79.84,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8R L60S R127T F160N",4
"lib2","SARS-CoV-2","TCCTATCCGCCGTAGA",4,79.19,7.92,-2.92,0.18,1.66,1.11,0.01,">1 nonsynonymous","G83H S113L K128N",3
"lib2","SARS-CoV-2","TCCTATCCTAGAAACT",2,13.55,10.63,-0.21,0.13,2.96,1.04,0,">1 nonsynonymous","K132L T140S",2
"lib2","SARS-CoV-2","TCCTATCTACCTACAC",7,53.35,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","T15F V37Y F44V L122T L131G N151L",6
"lib2","SARS-CoV-2","TCCTATCTATTTCTTT",10,66.75,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","D97N L122R C150S Y165D",4
"lib2","SARS-CoV-2","TCCTATCTTCTAGTGT",7,68.44,10.34,-0.5,0.04,2.91,1.01,0,">1 nonsynonymous","V37N F62P K132T N151M",4
"lib2","SARS-CoV-2","TCCTATGACAGAGGTA",2,0,NA,NA,NA,NA,NA,NA,"stop","R16V W23* N64*",3
"lib2","SARS-CoV-2","TCCTATGAGAAATAAC",4,44.35,10.82,-0.01,0.05,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCTATGAGTACCAAT",4,81.35,10.67,-0.17,0.03,2.96,1.06,0,">1 nonsynonymous","K56T F160T",2
"lib2","SARS-CoV-2","TCCTATGCACAAGCCC",4,6.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V T46P G174V",3
"lib2","SARS-CoV-2","TCCTATGCCTCCGATA",9,105.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D34E Y50L",2
"lib2","SARS-CoV-2","TCCTATGGGTACTAAA",8,97.25,10.4,-0.44,0.06,2.95,1.03,0,">1 nonsynonymous","V115G N151M",2
"lib2","SARS-CoV-2","TCCTATGGTGCTGAAA",8,144.08,9.88,-0.96,0.06,2.55,1.02,0,"1 nonsynonymous","V11A",1
"lib2","SARS-CoV-2","TCCTATTAAGATTAAG",5,40.6,10.85,0.01,0.04,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCTATTATGTCTATA",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134A S147Y S164L",3
"lib2","SARS-CoV-2","TCCTATTATTTAAGGT",2,37.25,8.3,-2.53,0.29,2.23,1.16,0.03,">1 nonsynonymous","N64S Q176V",2
"lib2","SARS-CoV-2","TCCTATTCCAGTTCAA",2,61.15,10.45,-0.39,0.06,2.84,1.12,0,">1 nonsynonymous","V37F E135L",2
"lib2","SARS-CoV-2","TCCTATTCGCATAAAC",3,25.45,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","T15L T46S V115L Y123L F167D",5
"lib2","SARS-CoV-2","TCCTATTTTTACCAAT",11,73.95,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I28E F62N A81S E135K T170I",5
"lib2","SARS-CoV-2","TCCTCAAAATGTCGTC",3,7.77,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Q84W N107S F185P",3
"lib2","SARS-CoV-2","TCCTCAAAGAGGTCTT",6,78.23,10.67,-0.17,0.03,2.93,1.09,0,">1 nonsynonymous","T63I H189R",2
"lib2","SARS-CoV-2","TCCTCAACCCGTGTGA",3,27.11,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K94G A105W L125T S139A",4
"lib2","SARS-CoV-2","TCCTCAATATCGTTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103R D112Y Q144F F156I Y175R T201M",6
"lib2","SARS-CoV-2","TCCTCACAAAATAGAC",3,6.48,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","S41Y K48P Q84N",3
"lib2","SARS-CoV-2","TCCTCACAGGACTAGA",3,81.35,10.79,-0.05,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCCTCACCACAAATCT",13,122.84,9.95,-0.89,0.06,2.41,1.03,0,">1 nonsynonymous","F99L N120H",2
"lib2","SARS-CoV-2","TCCTCACCGCAACATT",6,25.44,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P82A Y165G",2
"lib2","SARS-CoV-2","TCCTCACCTTAAAGCC",12,38.34,6.51,-4.32,0.44,1.5,1.18,0.02,">1 nonsynonymous","L95T N109D",2
"lib2","SARS-CoV-2","TCCTCACGCTAGAAGC",14,104.19,6,-4.84,1.72,1.5,1.21,0.01,">1 nonsynonymous","W23C S45L F99I N107S T201K",5
"lib2","SARS-CoV-2","TCCTCAGCCTGCTGGC",18,251.7,10.24,-0.6,0.02,2.93,1.03,0,">1 nonsynonymous","P133G G155S",2
"lib2","SARS-CoV-2","TCCTCAGGGTTGATTA",13,100.75,10.82,-0.02,0.06,2.95,1.08,0,"1 nonsynonymous","A192E",1
"lib2","SARS-CoV-2","TCCTCATTCGATGTAT",3,14.71,8.73,-2.11,0.3,1.5,1,0.05,"1 nonsynonymous","K94D",1
"lib2","SARS-CoV-2","TCCTCCAAACCGTGAC",6,34.79,7.69,-3.15,0.43,1.5,1.08,0.08,">1 nonsynonymous","W106G S139V G174L",3
"lib2","SARS-CoV-2","TCCTCCAACACTCGCG",10,69.08,6,-4.84,0.77,1.5,1.12,0.01,">1 nonsynonymous","A14T G83A W106L Y123M",4
"lib2","SARS-CoV-2","TCCTCCACAACGTCCC",2,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I D90I K114W P161L",4
"lib2","SARS-CoV-2","TCCTCCACAAGCCACT",14,236.73,10.12,-0.71,0.05,2.76,1.1,0,">1 nonsynonymous","S36E D75G N120F K199R",4
"lib2","SARS-CoV-2","TCCTCCACCTGACCTG",1,12.86,6,-4.84,0.94,3,1.07,0.01,">1 nonsynonymous","F47N K56F Y119C G174M",4
"lib2","SARS-CoV-2","TCCTCCAGATACATCC",3,116.78,10.73,-0.11,0.03,2.96,1.06,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","TCCTCCCATCCTTCCT",1,39.55,8.66,-2.17,0.11,2.06,1.06,0,">1 nonsynonymous","G74C D97Y",2
"lib2","SARS-CoV-2","TCCTCCCGCTGCAAAG",10,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R A22T T46Y L60T R136C",5
"lib2","SARS-CoV-2","TCCTCCCTGACCTCGC",3,56.17,8.94,-1.9,0.09,2.82,1.09,0,">1 nonsynonymous","K56S G146C",2
"lib2","SARS-CoV-2","TCCTCCGACTTATCCG",8,170.4,9.72,-1.11,0.05,2.81,1.08,0,">1 nonsynonymous","S36L Y143L",2
"lib2","SARS-CoV-2","TCCTCCGATGCACTGG",3,33.09,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A22R S43D F70I Y119C S200M",5
"lib2","SARS-CoV-2","TCCTCCGCCTTGTTGG",3,60.33,9.63,-1.2,0.13,2.41,1.04,0.01,">1 nonsynonymous","C6F A14C T201D",3
"lib2","SARS-CoV-2","TCCTCCGTATAAACAA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","D90*",1
"lib2","SARS-CoV-2","TCCTCCTCCCGGGGAT",8,2.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10F",1
"lib2","SARS-CoV-2","TCCTCCTTAAGTCCCG",4,27.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","K56M K94T N151T",3
"lib2","SARS-CoV-2","TCCTCGAAAAGGTTCA",5,79.05,10.77,-0.07,0.03,2.96,1.04,0,">1 nonsynonymous","K56D S164Y",2
"lib2","SARS-CoV-2","TCCTCGATACACAATA",10,155.35,6.35,-4.48,0.33,1.5,1.11,0.01,">1 nonsynonymous","E141V C150R L188T",3
"lib2","SARS-CoV-2","TCCTCGCATGTGCCAA",4,40.32,8.85,-1.98,0.08,2.26,1.14,0,">1 nonsynonymous","I2C Y66A Q168T",3
"lib2","SARS-CoV-2","TCCTCGGAATGAGGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","A81*",1
"lib2","SARS-CoV-2","TCCTCGGACCTTAAAG",5,33.04,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","R25F A89S K94N T100N R127S Y165I",6
"lib2","SARS-CoV-2","TCCTCGGCCGTTCTCC",3,37.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D90P A145K",2
"lib2","SARS-CoV-2","TCCTCGGGACTCATTT",2,5.73,9.21,-1.62,0.4,1.51,1,0.04,">1 nonsynonymous","F12L D97R I142K",3
"lib2","SARS-CoV-2","TCCTCTAAAAACTCAC",12,179.6,10.81,-0.03,0.03,2.87,1.14,0,"1 nonsynonymous","T100K",1
"lib2","SARS-CoV-2","TCCTCTAATTCCACAT",1,0.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62L E135S F167P Q176R",4
"lib2","SARS-CoV-2","TCCTCTACAGATAAAG",3,17.01,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","C6W R25I S43T D90H",4
"lib2","SARS-CoV-2","TCCTCTACAGATTAAA",3,44.71,10.77,-0.06,0.03,2.96,1.06,0,"1 nonsynonymous","P133A",1
"lib2","SARS-CoV-2","TCCTCTACGCACGATT",6,51.55,6.03,-4.81,1.05,1.5,1.21,0.02,">1 nonsynonymous","Y121S G146K T201S",3
"lib2","SARS-CoV-2","TCCTCTATATCAAGAC",13,98.07,9.54,-1.3,0.06,1.98,1.07,0,">1 nonsynonymous","Y35M T63K E141Q L183T",4
"lib2","SARS-CoV-2","TCCTCTCAATTGCATA",2,3.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V V77T F99I I104H Y123E S129R",6
"lib2","SARS-CoV-2","TCCTCTCACACCAAAC",1,19.42,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","T55P G83I Y91L S184R",4
"lib2","SARS-CoV-2","TCCTCTCCGGATACCT",1,22.02,10.87,0.03,0.03,3,1.01,0,"1 nonsynonymous","P197R",1
"lib2","SARS-CoV-2","TCCTCTCCTTAACGGC",2,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9D P133L",2
"lib2","SARS-CoV-2","TCCTCTCTAAGGCCTA",3,19.95,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F44R L95R N107F E154Y",4
"lib2","SARS-CoV-2","TCCTCTCTAGCGACAG",10,94.88,8.65,-2.19,0.12,1.86,1.19,0.01,">1 nonsynonymous","C6Y N107S",2
"lib2","SARS-CoV-2","TCCTCTCTGCAAAACA",3,24.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C61T K114R R127F",3
"lib2","SARS-CoV-2","TCCTCTGAAAAAGCAA",17,80.38,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V77Y S164L",2
"lib2","SARS-CoV-2","TCCTCTTACAACGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V32T C49W I72R I104S Y178*",5
"lib2","SARS-CoV-2","TCCTCTTAGTTAGGCA",3,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","TCCTCTTGTGAAAACG",3,15.96,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S41T T100H G116T Y143W F167R",5
"lib2","SARS-CoV-2","TCCTCTTGTGCCAAAG",2,15.86,6,-4.84,2,3,1.05,0,">1 nonsynonymous","S69L Y143S E154P",3
"lib2","SARS-CoV-2","TCCTGCAAGGCGAATG",3,0.71,NA,NA,NA,NA,NA,NA,"stop","A81* I138S",2
"lib2","SARS-CoV-2","TCCTGCCCTGTTAATA",19,42.16,7.1,-3.73,0.28,1.83,1.13,0.02,">1 nonsynonymous","N1G S45P I88T",3
"lib2","SARS-CoV-2","TCCTGCGGTCGGCCTA",5,10.35,NA,NA,NA,NA,NA,NA,"stop","F47V C61*",2
"lib2","SARS-CoV-2","TCCTGCGTGGTTAAAG",4,35.83,10.87,0.04,0.05,2.91,1.09,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","TCCTGCTACGGTAATT",2,89.1,10.84,0,0.05,2.94,1.07,0,">1 nonsynonymous","I2V I104V L122A",3
"lib2","SARS-CoV-2","TCCTGGCTCACCTGAA",2,7.89,10.78,-0.06,0.05,3,1,0,"1 nonsynonymous","L5V",1
"lib2","SARS-CoV-2","TCCTGTACTTTCTTCT",20,345.36,10.7,-0.13,0.03,2.93,1.06,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","TCCTGTCAAGTTAGTG",13,30.99,10.8,-0.03,0.06,2.93,1.05,0,">1 nonsynonymous","F12L R78Y Y91H F160A",4
"lib2","SARS-CoV-2","TCCTGTTTCAATTGCC",1,0.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S N40I L60R D98E N107M",5
"lib2","SARS-CoV-2","TCCTGTTTTGAAGAAT",1,48.36,9.09,-1.74,0.12,2.42,1.06,0.01,">1 nonsynonymous","F156E V180T",2
"lib2","SARS-CoV-2","TCCTTAAAAACGCAGG",4,4.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N F70I S139C A145W Q168P",5
"lib2","SARS-CoV-2","TCCTTAAACAATGTTC",9,66.54,6.49,-4.34,0.29,1.5,1.13,0.01,">1 nonsynonymous","T55S Y91Q Y123V P161H",4
"lib2","SARS-CoV-2","TCCTTAACGTAGAGCT",4,36.67,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","V103R H189L",2
"lib2","SARS-CoV-2","TCCTTAAGCCTGTAAA",4,69.69,9.38,-1.45,0.15,1.67,1.06,0.01,"1 nonsynonymous","V77Y",1
"lib2","SARS-CoV-2","TCCTTAAGTGGAAAAT",4,1.81,NA,NA,NA,NA,NA,NA,"stop","C6V W106A R127V P149* P197S",5
"lib2","SARS-CoV-2","TCCTTAATAAACCACA",4,56.47,8.51,-2.32,0.12,2.25,1.1,0.01,">1 nonsynonymous","N120T Q144I T201A",3
"lib2","SARS-CoV-2","TCCTTAATCCATAATG",4,68.15,6.75,-4.08,0.25,1.67,1.12,0.01,">1 nonsynonymous","F62V N157T Q176M",3
"lib2","SARS-CoV-2","TCCTTACAACCAAGAC",1,50.05,10.72,-0.12,0.05,2.94,1.02,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","TCCTTACAGACCAGAA",5,61.98,10.7,-0.14,0.08,2.79,1.21,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","TCCTTACAGCTTATAG",5,15.51,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D68P L95S",2
"lib2","SARS-CoV-2","TCCTTACATCTCAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Y A18G Y143H",3
"lib2","SARS-CoV-2","TCCTTACCGTTGGACA",2,21.19,8.07,-2.77,0.41,1.5,1.18,0.05,">1 nonsynonymous","E10Y F17R Y35V I88L N107I P133K V181W",7
"lib2","SARS-CoV-2","TCCTTACGAGGCCTGA",4,7.69,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33L N58Y G86F P191H",4
"lib2","SARS-CoV-2","TCCTTACGCAGGCCAA",6,75.39,10.62,-0.21,0.04,2.97,1.03,0,">1 nonsynonymous","K114S P149T",2
"lib2","SARS-CoV-2","TCCTTACGGTGTGAAC",2,48.41,9.12,-1.72,0.05,2.39,1.03,0,">1 nonsynonymous","R73D N171H",2
"lib2","SARS-CoV-2","TCCTTAGCGATTGTGA",18,207.62,9.94,-0.9,0.05,2.34,1.04,0,"1 nonsynonymous","K94V",1
"lib2","SARS-CoV-2","TCCTTAGCTATGAAGC",5,84.27,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N58L Y66S Y91C Y119T G155I",5
"lib2","SARS-CoV-2","TCCTTATAGTAGTCAG",2,11.96,6,-4.84,1.02,3,1.18,0.01,">1 nonsynonymous","F160N Y165G",2
"lib2","SARS-CoV-2","TCCTTATCGCTTTTGA",5,17.42,10.86,0.02,0.08,2.9,1.03,0,"1 nonsynonymous","Y178H",1
"lib2","SARS-CoV-2","TCCTTATGCGCATCCT",3,63.33,8,-2.84,0.14,2.45,1.07,0.01,"1 nonsynonymous","Y143D",1
"lib2","SARS-CoV-2","TCCTTATGGCCTAAAC",15,155.09,10.53,-0.3,0.03,2.87,1.12,0,"1 nonsynonymous","G83D",1
"lib2","SARS-CoV-2","TCCTTATTGCTATTTA",2,23.9,9.47,-1.37,0.1,2.07,1.02,0.01,">1 nonsynonymous","I28S S36K K56L",3
"lib2","SARS-CoV-2","TCCTTCAACCCTTCGA",5,78.32,10.02,-0.81,0.08,2.6,1.07,0,">1 nonsynonymous","S41P T63F K128T",3
"lib2","SARS-CoV-2","TCCTTCACAGACCTTG",4,53.73,10.86,0.02,0.04,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","TCCTTCACCGTTTAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2*",1
"lib2","SARS-CoV-2","TCCTTCAGATAAACTA",3,48.1,10.53,-0.3,0.07,2.78,1.16,0,">1 nonsynonymous","Y35L K114S",2
"lib2","SARS-CoV-2","TCCTTCCAGGACTAAG",3,32.78,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y93P N120H S129Y Y175S P191R",5
"lib2","SARS-CoV-2","TCCTTCCCATATGCGA",18,224.32,10.83,0,0.03,2.94,1.07,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","TCCTTCCGGTATAAAA",1,17,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y66P I72R L95T",3
"lib2","SARS-CoV-2","TCCTTCCTCATTCAAT",5,61.1,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P7L N40P G83M L95A T140K",5
"lib2","SARS-CoV-2","TCCTTCCTCGTTAGCG",2,22.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N1I F8T Y35G L131C G146P G155Y",6
"lib2","SARS-CoV-2","TCCTTCGAATCGGGAG",3,23.42,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V77L G83D N92F F99A K114R L122E P197V",7
"lib2","SARS-CoV-2","TCCTTCGAGCTGCAAT",1,0.29,NA,NA,NA,NA,NA,NA,"stop","I2G Y119T D137L P149*",4
"lib2","SARS-CoV-2","TCCTTCGCCTACATCA",8,46.76,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K87I W106D Y119I",3
"lib2","SARS-CoV-2","TCCTTCTCCCTTCCTT",7,16.26,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y35P I72S",2
"lib2","SARS-CoV-2","TCCTTCTGCACCAAAG",2,8.19,10.97,0.13,0.14,2.95,1.04,0,"1 nonsynonymous","G83C",1
"lib2","SARS-CoV-2","TCCTTCTTTAATCGGA",1,22.52,10.17,-0.67,0.13,2.69,1,0.01,"1 nonsynonymous","D90V",1
"lib2","SARS-CoV-2","TCCTTGAAGATATCAC",1,10.69,9.34,-1.5,0.08,1.94,1,0,">1 nonsynonymous","F12N V115L",2
"lib2","SARS-CoV-2","TCCTTGCCATGTCTGA",13,3.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V N13H V20R N92R D97I V181S",6
"lib2","SARS-CoV-2","TCCTTGCCATTCGAGT",7,130.79,6.92,-3.92,0.29,1.5,1.18,0.02,">1 nonsynonymous","A33R N40L D90R S139D V173E",5
"lib2","SARS-CoV-2","TCCTTGGCACAATAAC",12,251.76,8.94,-1.9,0.07,2.49,1.11,0,">1 nonsynonymous","T3K A145N",2
"lib2","SARS-CoV-2","TCCTTGTTCGAATGGC",2,15.58,8.62,-2.22,0.09,1.87,1.04,0.01,">1 nonsynonymous","A81R I88M",2
"lib2","SARS-CoV-2","TCCTTTAAAGAAAACT",5,10.78,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","S41L L122Y F134P",3
"lib2","SARS-CoV-2","TCCTTTAAAGTGATGC",2,4.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCCTTTATAACTGAAA",4,54.78,9.5,-1.34,0.05,2.81,1.04,0,"1 nonsynonymous","N118L",1
"lib2","SARS-CoV-2","TCCTTTCAAATACACA",2,0,NA,NA,NA,NA,NA,NA,"stop","C61* D90C F156L S164P T201Y",5
"lib2","SARS-CoV-2","TCCTTTCAAATTATTA",4,28.74,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F8R S129M C158M",3
"lib2","SARS-CoV-2","TCCTTTCAAGAAACAC",6,17.6,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V20S G146A G152T F167L",4
"lib2","SARS-CoV-2","TCCTTTGAAGAGATCC",5,26.31,10.54,-0.3,0.08,2.82,1.16,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","TCCTTTGATTGCAAAC",4,63.79,10.23,-0.6,0.07,2.81,1.08,0,">1 nonsynonymous","A33S C61T N120V",3
"lib2","SARS-CoV-2","TCCTTTGCGTACGAAT",23,126.75,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F8K T15I C61G D112T Q144E",5
"lib2","SARS-CoV-2","TCCTTTGGCGACATTG",1,3.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I D90W D137L G146R",4
"lib2","SARS-CoV-2","TCCTTTTAAAGTAATT",5,67.14,8.4,-2.44,0.13,3,1.09,0.01,">1 nonsynonymous","I2F Y159V",2
"lib2","SARS-CoV-2","TCCTTTTAGATCATTC",7,28.81,6,-4.84,2,3,1.23,0,">1 nonsynonymous","S36L D90F G146P G174L V180L S200C",6
"lib2","SARS-CoV-2","TCCTTTTATAGTGTGA",16,4.49,NA,NA,NA,NA,NA,NA,"stop","K87V K94* D137W S147Y",4
"lib2","SARS-CoV-2","TCCTTTTCGTAAAGTG",3,0,NA,NA,NA,NA,NA,NA,"stop","E10V A18* D68R G146L N157K",5
"lib2","SARS-CoV-2","TCCTTTTTCTCAATTC",3,32.96,6,-4.84,2,3,1.18,0,">1 nonsynonymous","L5K V11W K87V P161L L183N",5
"lib2","SARS-CoV-2","TCGAAAAAACTATATA",2,42.45,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V32E D90L Y119C F126G",4
"lib2","SARS-CoV-2","TCGAAAAACACGTATT",3,9.52,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L5R P82D N107V V115Y E154F Y175G",6
"lib2","SARS-CoV-2","TCGAAAAACCATAAGG",1,2.89,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A145C",1
"lib2","SARS-CoV-2","TCGAAAAACGCGTCAA",4,70.67,10.1,-0.73,0.09,2.66,1.08,0,">1 nonsynonymous","C31E T55V S147D T201C",4
"lib2","SARS-CoV-2","TCGAAAAAGGAGCAAA",2,102.83,8.44,-2.4,0.08,2.07,1.07,0,">1 nonsynonymous","V37Q T100C G152D Q176R",4
"lib2","SARS-CoV-2","TCGAAAAAGTTATAAT",3,69.14,6.09,-4.75,1.22,1.5,1.23,0.04,">1 nonsynonymous","Y91L N120V Q176R T201K",4
"lib2","SARS-CoV-2","TCGAAAAATACGAAGC",1,5.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","W106M Y143R",2
"lib2","SARS-CoV-2","TCGAAAAATGAATGGG",8,132.57,10.73,-0.1,0.03,2.97,1.05,0,">1 nonsynonymous","T55S N171S T201V",3
"lib2","SARS-CoV-2","TCGAAAAATTGTTATG",13,137.9,10.22,-0.61,0.05,2.85,1.03,0,">1 nonsynonymous","A14D C195I",2
"lib2","SARS-CoV-2","TCGAAAACTGGGCCTA",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R G152Q",2
"lib2","SARS-CoV-2","TCGAAAAGATTACGAC",4,31.17,6,-4.84,2,3,1.3,0,">1 nonsynonymous","F62R D68N I138N C150I",4
"lib2","SARS-CoV-2","TCGAAAAGCGGATTGG",3,18.34,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","L60A W106D",2
"lib2","SARS-CoV-2","TCGAAAATACAATAGG",2,81.8,8.04,-2.79,0.19,1.5,1.19,0.01,">1 nonsynonymous","F8I Y91V R136H",3
"lib2","SARS-CoV-2","TCGAAAATACTCGAAA",8,9.54,7.28,-3.56,0.48,2.67,1.22,0.04,">1 nonsynonymous","T15N P96S W106S G146L",4
"lib2","SARS-CoV-2","TCGAAAATATAGAAAC",7,262.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N130P P177K",2
"lib2","SARS-CoV-2","TCGAAAATGATCTGAT",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V W106R G155L L188M",4
"lib2","SARS-CoV-2","TCGAAAATTAAGAGGT",6,0.46,NA,NA,NA,NA,NA,NA,"stop","E10Q G83S P96* V103I T201L",5
"lib2","SARS-CoV-2","TCGAAACAGTTCAGAC",7,13.85,NA,NA,NA,NA,NA,NA,"stop","V37R F160*",2
"lib2","SARS-CoV-2","TCGAAAGACACAGAGG",5,32.61,8.55,-2.28,0.15,2.15,1.08,0.01,">1 nonsynonymous","V37M K87D R136S",3
"lib2","SARS-CoV-2","TCGAAAGATTGACAGG",8,116.09,10.72,-0.11,0.04,2.93,1.08,0,"1 nonsynonymous","S41G",1
"lib2","SARS-CoV-2","TCGAAAGCCGACCTAA",23,315.78,10.79,-0.05,0.03,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGAAAGGTAAATGTA",8,22.08,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15M V20L W106T K132D",4
"lib2","SARS-CoV-2","TCGAAAGTAAGAACTG",16,320.37,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86K P149T P177L",3
"lib2","SARS-CoV-2","TCGAAAGTACACTTAT",1,18,10.74,-0.1,0.04,3,1.02,0,">1 nonsynonymous","T3E R27S",2
"lib2","SARS-CoV-2","TCGAAAGTAGAAATGC",4,17.54,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","A89N L95H",2
"lib2","SARS-CoV-2","TCGAAAGTATTTTTAT",5,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T G86K",2
"lib2","SARS-CoV-2","TCGAAATCAAAAAATA",6,38.21,6,-4.84,2,2.85,1.08,0,">1 nonsynonymous","V103G G155S",2
"lib2","SARS-CoV-2","TCGAAATTGGAAGCGA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","T15M A89I N120*",3
"lib2","SARS-CoV-2","TCGAACAACAGTATTC",6,41.28,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2V Y93P",2
"lib2","SARS-CoV-2","TCGAACAAGTAGAATA",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44W Y91S S139G",3
"lib2","SARS-CoV-2","TCGAACACACCAGCTG",6,73.81,9.12,-1.71,0.1,2.78,1.17,0,"1 nonsynonymous","N157A",1
"lib2","SARS-CoV-2","TCGAACAGGCGTTGAA",1,16.62,6,-4.84,1.91,1.5,1.13,0.04,">1 nonsynonymous","V11H K48W F62A G117T",4
"lib2","SARS-CoV-2","TCGAACCAAACCAGCT",4,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F G146V",2
"lib2","SARS-CoV-2","TCGAACCAACATGGCA",1,15.74,10.89,0.05,0.06,2.94,1.06,0,"1 nonsynonymous","S147F",1
"lib2","SARS-CoV-2","TCGAACCACATGGAGA",5,126.23,9.05,-1.78,0.04,2.15,1.05,0,">1 nonsynonymous","R16P K56R Q176H",3
"lib2","SARS-CoV-2","TCGAACCAGAGACGGG",6,49.79,8.29,-2.54,0.18,1.5,1.14,0.01,">1 nonsynonymous","S53F F62S D90S N110K N130S Q144R K198Q",7
"lib2","SARS-CoV-2","TCGAACCTAACGCTAA",2,0.09,NA,NA,NA,NA,NA,NA,"stop","S45H I88* D98Q W106F",4
"lib2","SARS-CoV-2","TCGAACCTCAACTAAG",9,0,NA,NA,NA,NA,NA,NA,"stop","R27C G116* S184L",3
"lib2","SARS-CoV-2","TCGAACCTTAAATCCG",1,6.84,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G9S D34C C150S P197Y",4
"lib2","SARS-CoV-2","TCGAACCTTTCCACCA",1,41.74,8.44,-2.39,0.12,2.53,1.08,0.01,">1 nonsynonymous","S43R K87F S113Q T140R",4
"lib2","SARS-CoV-2","TCGAACGAACGGCATC",4,388.32,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N107S C150T Q168R Y178G",4
"lib2","SARS-CoV-2","TCGAACGCCCCACTTC",1,10.47,6,-4.84,2,3,1.14,0.01,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","TCGAACTAGCTGCTTA",10,63.96,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F17I G101L",2
"lib2","SARS-CoV-2","TCGAACTCATGACAAG",7,5.05,NA,NA,NA,NA,NA,NA,"stop","K56* C61Q W106P",3
"lib2","SARS-CoV-2","TCGAACTCATTACGGT",8,137.83,10.7,-0.14,0.03,2.97,1.06,0,">1 nonsynonymous","I2M I28M Q163N",3
"lib2","SARS-CoV-2","TCGAACTGCAAGGCCA",2,18.59,6,-4.84,2,1.5,1.26,0.06,"1 nonsynonymous","G101I",1
"lib2","SARS-CoV-2","TCGAACTTAACCCAAC",1,17.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A14F A81L S113W",3
"lib2","SARS-CoV-2","TCGAACTTTCTTCGAT",4,49.93,10.89,0.06,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGAAGAAGCTTTTCT",10,71.23,9.16,-1.67,0.05,2.9,1.02,0,">1 nonsynonymous","T3R S43G Y119M K198Q",4
"lib2","SARS-CoV-2","TCGAAGAATAGTTGAC",2,31.74,9.47,-1.36,0.06,2.9,1.07,0,">1 nonsynonymous","L5P G166T",2
"lib2","SARS-CoV-2","TCGAAGACATATAACC",13,89.38,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F44R D59I K132F Y143T P149T",5
"lib2","SARS-CoV-2","TCGAAGACTTGGAGCA",14,152.76,9.52,-1.31,0.05,2.85,1.07,0,">1 nonsynonymous","F62T I142S",2
"lib2","SARS-CoV-2","TCGAAGAGTTTCTGTT",3,154.19,9.93,-0.91,0.07,2.6,1.06,0,">1 nonsynonymous","I2G A33K D97N P149T",4
"lib2","SARS-CoV-2","TCGAAGATCTCTTGTT",9,117.44,10.42,-0.41,0.05,2.92,1.03,0,">1 nonsynonymous","S36V T63H K198V",3
"lib2","SARS-CoV-2","TCGAAGCTCGTCCTCT",1,68.22,10.76,-0.08,0.05,2.91,1.11,0,">1 nonsynonymous","A33W D98P",2
"lib2","SARS-CoV-2","TCGAAGGCCCAGTTCC",14,215.2,9.81,-1.03,0.05,2.66,1.03,0,">1 nonsynonymous","G116V Y121Q",2
"lib2","SARS-CoV-2","TCGAAGTCGAAAACCA",11,36.79,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A22D R136T V182H",3
"lib2","SARS-CoV-2","TCGAAGTCGACAATTA",1,2.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43C I88N N92Q L125H T148C P161L",6
"lib2","SARS-CoV-2","TCGAAGTCTAACATAA",2,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R K48W T85L",3
"lib2","SARS-CoV-2","TCGAAGTTATTAGTAG",3,59.47,10.63,-0.21,0.07,2.9,1.04,0,">1 nonsynonymous","L5M S36L I72L",3
"lib2","SARS-CoV-2","TCGAATAAAAAAATGT",4,1.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25V A89S V181Y K199N",4
"lib2","SARS-CoV-2","TCGAATAAGTCAGCGA",5,29.74,9.69,-1.14,0.09,2.3,1.05,0,">1 nonsynonymous","R27P N107C",2
"lib2","SARS-CoV-2","TCGAATAATAATGATT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","N40H G166*",2
"lib2","SARS-CoV-2","TCGAATAATGGGGCTT",9,66.95,6.76,-4.08,0.33,1.5,1.12,0.02,">1 nonsynonymous","S29E D68N",2
"lib2","SARS-CoV-2","TCGAATACATAATATG",18,173,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61N A89W T100A L125G",4
"lib2","SARS-CoV-2","TCGAATACATCAATAA",1,2505.91,9.99,-0.85,0.05,2.71,1,0,">1 nonsynonymous","C6N T85M T201C",3
"lib2","SARS-CoV-2","TCGAATATCATGAAAA",2,61.23,10.85,0.01,0.05,2.92,1.1,0,">1 nonsynonymous","Y39V L122M K128S",3
"lib2","SARS-CoV-2","TCGAATCAATAATTCG",5,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90P I104S V181N",3
"lib2","SARS-CoV-2","TCGAATCACAACTGTG",7,38.25,9.11,-1.73,0.13,1.88,1.1,0.01,">1 nonsynonymous","F12I V103T",2
"lib2","SARS-CoV-2","TCGAATCACAGCAAAA",2,29.94,6.36,-4.48,0.61,1.5,1.22,0.03,">1 nonsynonymous","R25V V32F F62Y K87S",4
"lib2","SARS-CoV-2","TCGAATCGAACATTAG",3,29.16,10.23,-0.61,0.08,2.8,1.07,0,">1 nonsynonymous","S53I G83M S129L",3
"lib2","SARS-CoV-2","TCGAATCTAGGTAACG",5,3.38,NA,NA,NA,NA,NA,NA,"stop","F70* G83D S139N",3
"lib2","SARS-CoV-2","TCGAATCTGGTCGGCG",4,57.64,10.85,0.02,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGAATCTGTATTTAT",1,41.6,9.4,-1.43,0.12,2.81,1.12,0.01,">1 nonsynonymous","T3P G166T",2
"lib2","SARS-CoV-2","TCGAATCTTACCTACA",3,94.87,10.13,-0.7,0.05,2.91,1.06,0,">1 nonsynonymous","N40A C61N S164L",3
"lib2","SARS-CoV-2","TCGAATGAAAAACATC",4,19.28,8.75,-2.09,0.24,1.78,1.16,0.02,">1 nonsynonymous","Y50F V77F",2
"lib2","SARS-CoV-2","TCGAATGCCCAGCTTC",17,348.09,10.36,-0.47,0.04,2.52,1.03,0,">1 nonsynonymous","L5P L57V E141V N171T",4
"lib2","SARS-CoV-2","TCGAATGGATCACACG",14,203.15,9.79,-1.05,0.05,2.65,1.04,0,">1 nonsynonymous","L5V F44C P54T V115P",4
"lib2","SARS-CoV-2","TCGAATGGTGTACCTT",5,86.92,8.03,-2.8,0.33,1.5,1.01,0.04,">1 nonsynonymous","F12Y C61H G83N D98E G155M",5
"lib2","SARS-CoV-2","TCGAATGTAAGGTAGT",4,2.5,NA,NA,NA,NA,NA,NA,"stop","Q84* C150S",2
"lib2","SARS-CoV-2","TCGAATGTCGGAGTGA",1,39.73,6,-4.84,1.47,1.5,1.08,0.01,">1 nonsynonymous","I104G Q176E",2
"lib2","SARS-CoV-2","TCGAATTAAGGCAAAA",4,37.75,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","K56V P96L E154S F185Y",4
"lib2","SARS-CoV-2","TCGAATTACCAAGAGA",25,215.24,9.95,-0.89,0.06,2.19,1.05,0,"1 nonsynonymous","R136N",1
"lib2","SARS-CoV-2","TCGAATTTAATTCCAA",1,10.76,8.24,-2.6,0.41,1.6,1.09,0.05,">1 nonsynonymous","G9A D97R K114E P161N",4
"lib2","SARS-CoV-2","TCGAATTTTATCCACC",4,55.06,10.74,-0.09,0.04,2.95,1.05,0,"1 nonsynonymous","N4V",1
"lib2","SARS-CoV-2","TCGACAAACGCTAAGT",1,11.41,9.25,-1.58,0.07,3,1.08,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TCGACAAAGGCGAATA",7,401.26,9.42,-1.41,0.03,2.77,1.06,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","TCGACAACAACAAAGA",1,29.61,6.82,-4.02,0.56,1.5,1.14,0.07,">1 nonsynonymous","S19I N107Y L125S",3
"lib2","SARS-CoV-2","TCGACAACCAATCATG",13,253.5,10.86,0.03,0.03,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGACAACTTTCACTG",8,70.91,10.29,-0.54,0.04,2.88,1.1,0,">1 nonsynonymous","N40L N64M",2
"lib2","SARS-CoV-2","TCGACAATGATGACGG",3,44.43,9.13,-1.7,0.07,2.28,1.04,0,">1 nonsynonymous","S41F E135V G174R",3
"lib2","SARS-CoV-2","TCGACACAGCCAAGTA",4,68.94,10.31,-0.52,0.06,2.9,1.11,0,">1 nonsynonymous","S36K N118E",2
"lib2","SARS-CoV-2","TCGACACCGCGACAGA",6,54.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L A14T T63R A89C P149S",5
"lib2","SARS-CoV-2","TCGACACTAGCCGAAT",1,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86W N107R I142S",3
"lib2","SARS-CoV-2","TCGACACTGGGAATGT",9,64.21,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L95T C150K",2
"lib2","SARS-CoV-2","TCGACAGGAATCTAAG",1,17.64,10.34,-0.49,0.1,2.76,1.02,0,">1 nonsynonymous","G9K E135K",2
"lib2","SARS-CoV-2","TCGACAGTATACTCCT",5,81.39,10.82,-0.01,0.05,2.93,1.09,0,"1 nonsynonymous","N40G",1
"lib2","SARS-CoV-2","TCGACAGTATACTGAA",7,75.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R16F V71E G83V R124S",4
"lib2","SARS-CoV-2","TCGACATAACTACCGA",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L R16N F44V D98Y",4
"lib2","SARS-CoV-2","TCGACATGGTGAATCA",10,23.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F T46Q D112G Y159S Y178Q K198T",6
"lib2","SARS-CoV-2","TCGACATTTCTAACTA",15,11.18,NA,NA,NA,NA,NA,NA,"stop","G74* E154G T201P",3
"lib2","SARS-CoV-2","TCGACCAAAAAACCCG",7,77.15,6,-4.84,2,3,1.23,0,">1 nonsynonymous","T15I V20L Y121S",3
"lib2","SARS-CoV-2","TCGACCACGAGTCACT",3,21.8,10.76,-0.08,0.05,2.94,1.07,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","TCGACCACGATTTACA",2,6.41,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","N58H I104N",2
"lib2","SARS-CoV-2","TCGACCACGTACCTCG",3,39.49,10.87,0.03,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGACCAGAGATAAGG",10,80.42,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N40R K94D D112G K128S T201M",5
"lib2","SARS-CoV-2","TCGACCCATCGAATAT",2,55.61,10.16,-0.68,0.05,3,1.01,0,">1 nonsynonymous","R16V T100M Q168T",3
"lib2","SARS-CoV-2","TCGACCCCCGGACCCT",2,46.2,10.53,-0.31,0.04,2.92,1.07,0,">1 nonsynonymous","L131I I138G",2
"lib2","SARS-CoV-2","TCGACCCCTGTTGCCC",2,33.13,6,-4.84,0.68,1.5,1.13,0.01,"1 nonsynonymous","Y93K",1
"lib2","SARS-CoV-2","TCGACCCGACACATGA",8,143.76,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G86L E141P",2
"lib2","SARS-CoV-2","TCGACCTAAACACTAT",1,15.32,10.23,-0.61,0.2,2.69,1.37,0.02,">1 nonsynonymous","N1G N130R",2
"lib2","SARS-CoV-2","TCGACCTTGATTAACG",4,64.46,7.91,-2.93,0.2,1.67,1.11,0.01,">1 nonsynonymous","N107R Y119L S129T I138M",4
"lib2","SARS-CoV-2","TCGACGAAATGATATA",2,0.67,NA,NA,NA,NA,NA,NA,"stop","G51*",1
"lib2","SARS-CoV-2","TCGACGACCCGGAGAT",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10V A18T N40R N107I G116V P197L",6
"lib2","SARS-CoV-2","TCGACGATTCCGCACT",2,17.11,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","S36A D68T D90V N107A G117T I138R F160R",7
"lib2","SARS-CoV-2","TCGACGCAACTGTTGA",2,9.9,9.87,-0.97,0.2,2.36,1.11,0.01,">1 nonsynonymous","A42R T55P C61T F185S P197V",5
"lib2","SARS-CoV-2","TCGACGCAGTATAAAA",9,67.5,6,-4.84,1.12,1.5,1.17,0.01,">1 nonsynonymous","G86C K94D I138P",3
"lib2","SARS-CoV-2","TCGACGCCGAGAATGG",4,92.7,10.23,-0.6,0.06,2.6,1.09,0,">1 nonsynonymous","N13M P149T",2
"lib2","SARS-CoV-2","TCGACGCCGGCTTCCT",2,24.36,10.09,-0.75,0.09,2.86,1.02,0,">1 nonsynonymous","S41M S139L",2
"lib2","SARS-CoV-2","TCGACGCGATCCAGGA",2,15.54,8.45,-2.39,0.19,2.04,1.05,0.01,">1 nonsynonymous","N4V V37S S53L L60H D97Y Y119T",6
"lib2","SARS-CoV-2","TCGACGGACGAATTTT",4,53.46,9.58,-1.26,0.12,1.74,1.01,0.01,">1 nonsynonymous","L5K F12Q",2
"lib2","SARS-CoV-2","TCGACGGGTACCCGAA",4,37.39,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R16L F62S S69E D90F K114W",5
"lib2","SARS-CoV-2","TCGACGGTACGGCACA",1,43.07,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I2M P96E C150E N171I",4
"lib2","SARS-CoV-2","TCGACTAATATAAGCC",2,26.16,10.59,-0.25,0.07,2.92,1,0,"1 nonsynonymous","D90W",1
"lib2","SARS-CoV-2","TCGACTACTATAGTAA",8,105.47,7.46,-3.38,0.22,1.5,1.05,0.01,">1 nonsynonymous","A89G L122S F134I",3
"lib2","SARS-CoV-2","TCGACTAGAAAAAAGG",2,19.45,10.79,-0.05,0.08,3,1.03,0,"1 nonsynonymous","L60N",1
"lib2","SARS-CoV-2","TCGACTATACGAGACC",5,93.1,10.6,-0.24,0.05,2.91,1.06,0,"1 nonsynonymous","Y35P",1
"lib2","SARS-CoV-2","TCGACTCAGTCCACAT",7,122.41,10.07,-0.77,0.07,2.57,1.05,0,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","TCGACTGAACTTTATT",3,81.44,10.78,-0.05,0.05,2.85,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGACTGGATCAATTT",13,77.9,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","E76R V103F R127S R179M",4
"lib2","SARS-CoV-2","TCGACTGTTAACGACG",1,84.66,10.54,-0.29,0.05,2.9,1.06,0,">1 nonsynonymous","K48E G83A",2
"lib2","SARS-CoV-2","TCGACTTAGTTGAGTG",3,29.51,8.99,-1.85,0.07,2.89,1.14,0,">1 nonsynonymous","Y39L G117K R136Q",3
"lib2","SARS-CoV-2","TCGACTTCAGACTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14G L57V L95* A192P",4
"lib2","SARS-CoV-2","TCGACTTTAAACGGCA",11,144.52,10.81,-0.02,0.04,2.94,1.06,0,">1 nonsynonymous","N151S S164Q",2
"lib2","SARS-CoV-2","TCGACTTTTAAATTTA",14,175.75,10.18,-0.65,0.04,2.85,1.07,0,">1 nonsynonymous","Y66S N120D V173Y",3
"lib2","SARS-CoV-2","TCGAGAAAATCAATAT",3,15.38,6,-4.84,2,3,1.1,0,">1 nonsynonymous","C6L N40F G51P",3
"lib2","SARS-CoV-2","TCGAGAACACTGGCAA",6,171.58,9.92,-0.92,0.07,2.45,1.03,0,">1 nonsynonymous","G9V R16K Y39S K56T T100L K128F",6
"lib2","SARS-CoV-2","TCGAGAATAGGATAAC",14,286.7,10.83,0,0.05,2.95,1.07,0,"1 nonsynonymous","N4R",1
"lib2","SARS-CoV-2","TCGAGACACACTTAAC",5,41.91,10.58,-0.25,0.05,2.88,1.08,0,">1 nonsynonymous","L5N D90L",2
"lib2","SARS-CoV-2","TCGAGAGACATACCGC",4,12.71,6.95,-3.89,0.46,1.5,1.22,0.05,">1 nonsynonymous","A14V V20E C49R C102N A190V",5
"lib2","SARS-CoV-2","TCGAGATCACTATGAA",8,131.23,9.21,-1.62,0.07,2.3,1.05,0,">1 nonsynonymous","C6G S45F",2
"lib2","SARS-CoV-2","TCGAGATCAGATCTTA",9,76.02,8.09,-2.75,0.13,1.56,1.08,0.01,">1 nonsynonymous","A81V N118S Y159F",3
"lib2","SARS-CoV-2","TCGAGATCTTACCATA",5,62.53,9.74,-1.09,0.12,2.5,1.11,0.01,">1 nonsynonymous","A33R F44V",2
"lib2","SARS-CoV-2","TCGAGCAAACTTTTTA",3,7.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L F126V P133H Y143F",4
"lib2","SARS-CoV-2","TCGAGCAAGCCTATCC",6,22.15,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49R P54K F99Y L188R T201V",5
"lib2","SARS-CoV-2","TCGAGCAGCAGCTAAC",9,223.03,10.46,-0.37,0.05,2.93,1.04,0,"1 nonsynonymous","A14T",1
"lib2","SARS-CoV-2","TCGAGCCCGGGCTGGC",2,1.66,NA,NA,NA,NA,NA,NA,"stop","W23L S29G Y50L Y119A T148*",5
"lib2","SARS-CoV-2","TCGAGCCGAATACAAA",6,108.34,9.79,-1.04,0.03,2.82,1.01,0,">1 nonsynonymous","R16Y N118Y I138M",3
"lib2","SARS-CoV-2","TCGAGCGGATCGATAT",1,30.94,9.61,-1.22,0.07,2.58,1,0,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","TCGAGGAGCCTCAAAT",5,0.7,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","TCGAGGCATAACACAA",13,50.34,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2Q N107Y N157E G174L",4
"lib2","SARS-CoV-2","TCGAGTTACACTAAGA",3,9.79,10.55,-0.29,0.12,2.87,1.12,0,">1 nonsynonymous","I2W G155S",2
"lib2","SARS-CoV-2","TCGATAAAACAATACA",3,12.95,6.28,-4.55,1.4,1.5,1.22,0.02,">1 nonsynonymous","E10T I28P D34M",3
"lib2","SARS-CoV-2","TCGATAAATCTAATAA",5,51.12,8.57,-2.27,0.14,1.5,1.04,0.01,">1 nonsynonymous","L5G N58Y N92S",3
"lib2","SARS-CoV-2","TCGATAACACATGACT",2,0.67,NA,NA,NA,NA,NA,NA,"stop","V37I R127* P133T",3
"lib2","SARS-CoV-2","TCGATAACGTAGCACC",3,181.61,6,-4.84,1.46,1.5,1.14,0.01,">1 nonsynonymous","S19K R27Q V181T",3
"lib2","SARS-CoV-2","TCGATAAGGGCCCCAT",6,69.62,10.73,-0.1,0.05,2.94,1.08,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","TCGATAATGCACAGAA",9,90.51,10.63,-0.21,0.03,2.95,1.05,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TCGATACACGCCTAAA",2,27.77,10.9,0.06,0.09,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGATACAGTGTCCCA",7,94.45,10.76,-0.08,0.03,2.94,1.07,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","TCGATACATGCTTTAT",4,27.38,7.61,-3.23,0.19,1.56,1.04,0.01,">1 nonsynonymous","G9R K56I Y91L P169W",4
"lib2","SARS-CoV-2","TCGATACCTTCATAAG",7,63.95,7.15,-3.69,0.27,1.5,1.18,0.02,">1 nonsynonymous","K94S N107A",2
"lib2","SARS-CoV-2","TCGATACTAACCAAAG",3,1.53,NA,NA,NA,NA,NA,NA,"stop","I2Y L38*",2
"lib2","SARS-CoV-2","TCGATACTTGTGGCCG",17,5.06,NA,NA,NA,NA,NA,NA,"stop","L5Y S53* C102L N120T",4
"lib2","SARS-CoV-2","TCGATAGATGACTCCA",4,28.27,6.12,-4.72,1.08,1.5,1.2,0.03,">1 nonsynonymous","D59L V103N R127C",3
"lib2","SARS-CoV-2","TCGATAGCTGAGCATT",6,18.52,10.5,-0.34,0.09,2.96,1,0,">1 nonsynonymous","S45N P54E E141A",3
"lib2","SARS-CoV-2","TCGATAGTACTACAAG",7,137.98,10.23,-0.61,0.03,2.91,1.05,0,">1 nonsynonymous","K87S D97R S147R",3
"lib2","SARS-CoV-2","TCGATAGTCCAAACTC",20,237.97,10.81,-0.03,0.05,2.99,1.03,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","TCGATAGTTGGAAATG",1,20.6,10.38,-0.46,0.06,2.99,1.02,0,"1 nonsynonymous","G166A",1
"lib2","SARS-CoV-2","TCGATATAATATTACC",10,0.28,NA,NA,NA,NA,NA,NA,"stop","P54A K198*",2
"lib2","SARS-CoV-2","TCGATATACAGAGCCT",4,53.8,10.29,-0.55,0.05,2.78,1.07,0,">1 nonsynonymous","L5H A33S V37W Q84H",4
"lib2","SARS-CoV-2","TCGATATAGTTATACA",17,188.92,10.19,-0.65,0.07,2.5,1.03,0,"1 nonsynonymous","P96R",1
"lib2","SARS-CoV-2","TCGATATATGAAACAT",1,2.8,NA,NA,NA,NA,NA,NA,"stop","P7N Y93K G174* Y178V",4
"lib2","SARS-CoV-2","TCGATATGAGGCACGC",3,125,10.81,-0.03,0.05,2.98,1.03,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","TCGATATTACGTGCAG",1,35.83,9.75,-1.09,0.08,2.68,1.08,0,">1 nonsynonymous","N64G G155V",2
"lib2","SARS-CoV-2","TCGATATTGCCAGAGT",6,25.86,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","C6V V11C S108I K132L Q144D V173I",6
"lib2","SARS-CoV-2","TCGATCAAGCAACCCA",3,1.58,NA,NA,NA,NA,NA,NA,"stop","F8S F47S L60G W106* N171F",5
"lib2","SARS-CoV-2","TCGATCAATGGTATAT",3,0.95,NA,NA,NA,NA,NA,NA,"stop","F70* N130M",2
"lib2","SARS-CoV-2","TCGATCAATTACAACA",11,29.28,9.26,-1.58,0.2,1.5,1.1,0.02,">1 nonsynonymous","L5R D68M V153I",3
"lib2","SARS-CoV-2","TCGATCACACTAAACG",2,7.99,8.3,-2.54,0.26,2.03,1,0.03,">1 nonsynonymous","N13S N24T S139W",3
"lib2","SARS-CoV-2","TCGATCACGATCCGCG",7,86.09,9.03,-1.81,0.06,2.19,1.05,0,">1 nonsynonymous","D97F N151I P169A S200W",4
"lib2","SARS-CoV-2","TCGATCACTCGACACC",1,55.47,10.45,-0.39,0.03,2.95,1.05,0,"1 nonsynonymous","F44K",1
"lib2","SARS-CoV-2","TCGATCAGGAAACCTG",7,111.94,9.63,-1.21,0.08,1.81,1.09,0,">1 nonsynonymous","F44I A105H",2
"lib2","SARS-CoV-2","TCGATCATTAAAATAA",1,46.56,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G9C T55S G146L",3
"lib2","SARS-CoV-2","TCGATCCAGCGTAGAG",5,13.66,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15R G101R",2
"lib2","SARS-CoV-2","TCGATCCGATCTATAT",13,12.78,6,-4.84,2,3,1.11,0,">1 nonsynonymous","I2E L60G L122Q L183P",4
"lib2","SARS-CoV-2","TCGATCCTCGCAGTTA",10,36.88,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T46S G74M F99T",3
"lib2","SARS-CoV-2","TCGATCCTGGATCCGA",12,202.43,9.81,-1.02,0.05,2.54,1.03,0,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","TCGATCGATCCAAAAA",3,19.37,10.45,-0.38,0.08,2.91,1.07,0,"1 nonsynonymous","N13H",1
"lib2","SARS-CoV-2","TCGATCGTCAAAAGTT",5,11.13,NA,NA,NA,NA,NA,NA,"stop","G86* D112I Y121D T201K",4
"lib2","SARS-CoV-2","TCGATCTCTAAGCGTA",8,64.79,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","T63G V71Y Y123L",3
"lib2","SARS-CoV-2","TCGATCTTGTTAGCGC",2,23.49,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","R73I A89Y N130K",3
"lib2","SARS-CoV-2","TCGATCTTTCCAATCA",3,11.2,7.74,-3.1,0.36,1.5,1,0.05,">1 nonsynonymous","N1L A14C C158I",3
"lib2","SARS-CoV-2","TCGATGATAGAATCCA",2,31.63,10.93,0.09,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGATGATCGAGGTGA",18,246.72,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","A89N Y175I",2
"lib2","SARS-CoV-2","TCGATGATGTATGCTA",2,47.9,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K56D S139N R179P K198W",4
"lib2","SARS-CoV-2","TCGATGCAAAAATATT",12,3.11,NA,NA,NA,NA,NA,NA,"stop","N4I S45* F62M Y91T V173R S184M K199N",7
"lib2","SARS-CoV-2","TCGATGCTCTGTACGC",2,39.72,9.08,-1.75,0.09,2.35,1.12,0,">1 nonsynonymous","A14T S36R K87V R127S",4
"lib2","SARS-CoV-2","TCGATGGACTTCCACT",2,5.84,6.28,-4.56,1.72,3,1.21,0.02,">1 nonsynonymous","Y21P Q84I Y91S G101D N109H Y123M N130P",7
"lib2","SARS-CoV-2","TCGATGGGAATGTCAA",13,137.29,10.81,-0.03,0.04,2.95,1.07,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","TCGATGTTATTTGCCT",14,78.71,6.03,-4.8,0.98,1.5,1.21,0.02,">1 nonsynonymous","T55G A67H F185L",3
"lib2","SARS-CoV-2","TCGATGTTTTAAAACG",10,71.41,10.79,-0.05,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGATTAAAAAAGAAT",9,1.21,NA,NA,NA,NA,NA,NA,"stop","R16F S36Y G86S P96L S108P R127*",6
"lib2","SARS-CoV-2","TCGATTAAAACGACTA",9,1.62,NA,NA,NA,NA,NA,NA,"stop","N40L D112* R124S V180C",4
"lib2","SARS-CoV-2","TCGATTAAAACTCAGA",2,18.98,9.46,-1.37,0.08,2.24,1,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","TCGATTACCGCCAATC",5,45.6,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","S69Q Y91L Q144F",3
"lib2","SARS-CoV-2","TCGATTAGGGTTCGCC",7,137.12,10.82,-0.01,0.05,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGATTCCGATTAATT",1,1.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165R",1
"lib2","SARS-CoV-2","TCGATTCTGAACTAGA",4,19.72,6.22,-4.61,0.38,2.41,1.16,0,">1 nonsynonymous","N1K C6P V37W F134Y Y165W",5
"lib2","SARS-CoV-2","TCGATTCTTTTGAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4* D112M R179W",3
"lib2","SARS-CoV-2","TCGATTTAGTATAGAT",10,123.7,10.82,-0.01,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGCAAAAACTGGCAA",4,0.27,NA,NA,NA,NA,NA,NA,"stop","A18* G101C Y121L K128V K198Y",5
"lib2","SARS-CoV-2","TCGCAAAAAGCAAACG",10,131.33,9.24,-1.59,0.03,2.88,1.12,0,">1 nonsynonymous","D59N K87R Y119K G152D",4
"lib2","SARS-CoV-2","TCGCAAAATCAAACTA",4,0,NA,NA,NA,NA,NA,NA,"stop","T100* Y123* A145T S200L",4
"lib2","SARS-CoV-2","TCGCAAACCATCACGA",1,6.46,10.75,-0.08,0.09,3,1,0,">1 nonsynonymous","F44W K114R",2
"lib2","SARS-CoV-2","TCGCAAATACTTCACA",9,111.29,10.9,0.07,0.07,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGCAAATCAGCTCAG",5,0.24,NA,NA,NA,NA,NA,NA,"stop","V37T T55A D98Y S139*",4
"lib2","SARS-CoV-2","TCGCAAATCTCCCAAA",5,186.09,6,-4.84,2,2.15,1.15,0,">1 nonsynonymous","A18D V37Y G116V L122E Y165L",5
"lib2","SARS-CoV-2","TCGCAACACCAGGCGA",5,34.89,7.23,-3.61,0.25,2.43,1.23,0.01,"1 nonsynonymous","C158E",1
"lib2","SARS-CoV-2","TCGCAACACCGGCACT",5,0.58,NA,NA,NA,NA,NA,NA,"stop","N24* P82W",2
"lib2","SARS-CoV-2","TCGCAACCACGTTATC",3,31.6,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","R25V Q144I",2
"lib2","SARS-CoV-2","TCGCAACGACAGAGAT",5,38.23,10.38,-0.46,0.08,2.99,1.01,0,">1 nonsynonymous","S36L G174M",2
"lib2","SARS-CoV-2","TCGCAACGCATGGGTT",12,128.54,6,-4.84,1.35,1.5,1.24,0.01,"1 nonsynonymous","N92H",1
"lib2","SARS-CoV-2","TCGCAACTACACGCGT",2,11.32,8.54,-2.29,0.13,2.07,1,0,">1 nonsynonymous","G146R L183V",2
"lib2","SARS-CoV-2","TCGCAAGAGATTGTCG",5,43.74,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10K S41H N64F I72R Y121N K198L",6
"lib2","SARS-CoV-2","TCGCAAGATAAAAAAA",2,12.08,9.98,-0.86,0.13,2.24,1.02,0.01,">1 nonsynonymous","P133L A192S",2
"lib2","SARS-CoV-2","TCGCAAGCTAAGTGGG",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37P V103R T170V",3
"lib2","SARS-CoV-2","TCGCAAGGGGCCCCTT",7,114.23,8.39,-2.44,0.04,2.17,1.06,0,">1 nonsynonymous","L60P K87D D97V",3
"lib2","SARS-CoV-2","TCGCAATCAAAGACTA",1,3.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62Y G83H",2
"lib2","SARS-CoV-2","TCGCAATGGCTCATAG",1,51.7,10.64,-0.19,0.05,2.89,1.14,0,"1 nonsynonymous","K26Q",1
"lib2","SARS-CoV-2","TCGCAATTTAGTCCAG",4,20.62,6.91,-3.92,0.33,1.5,1.06,0.02,"1 nonsynonymous","R127V",1
"lib2","SARS-CoV-2","TCGCAATTTCGCCTAC",4,77.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T46I G155V P161I",3
"lib2","SARS-CoV-2","TCGCACAAGGAACTAA",4,63.47,10.58,-0.26,0.05,2.89,1.1,0,">1 nonsynonymous","V115S S139G",2
"lib2","SARS-CoV-2","TCGCACACGATTCTGC",3,16.69,9.44,-1.39,0.16,1.57,1.09,0.02,">1 nonsynonymous","F47S D98S V115I V173L Y178F",5
"lib2","SARS-CoV-2","TCGCACATACGTCAAT",6,56.31,6.04,-4.79,0.83,1.5,1.16,0.01,">1 nonsynonymous","C6L D68K N107V Y143Q",4
"lib2","SARS-CoV-2","TCGCACCCTCAATTTA",2,20.09,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","R16D T100P R127S F134K",4
"lib2","SARS-CoV-2","TCGCACCTTAAAGCGT",6,238.9,10.35,-0.49,0.04,2.91,1.01,0,">1 nonsynonymous","E10P N58T",2
"lib2","SARS-CoV-2","TCGCACGAATCAAATC",7,187.49,10.75,-0.09,0.07,2.85,1.11,0,">1 nonsynonymous","T55W P149S",2
"lib2","SARS-CoV-2","TCGCACGAATTAGGTA",3,87.27,11.03,0.19,0.04,2.97,1.04,0,">1 nonsynonymous","L5V N171M",2
"lib2","SARS-CoV-2","TCGCACGATAACGCGA",8,50.68,10.93,0.09,0.07,2.94,1.06,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","TCGCACGCACATCACC",4,49.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86R F99M",2
"lib2","SARS-CoV-2","TCGCACTAAAAACCCC",1,36.55,10.74,-0.09,0.06,2.88,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGCACTAATACATGA",8,19.07,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","T15E G101P Y165E",3
"lib2","SARS-CoV-2","TCGCACTGCTTTAGTT",6,2.09,NA,NA,NA,NA,NA,NA,"stop","C49I F134V P149*",3
"lib2","SARS-CoV-2","TCGCACTTATCGCCAA",7,117.96,10.43,-0.4,0.04,2.85,1.09,0,"1 nonsynonymous","A81C",1
"lib2","SARS-CoV-2","TCGCAGAACATGTTCT",4,0,NA,NA,NA,NA,NA,NA,"stop","Y35S N58T D137* G174M",4
"lib2","SARS-CoV-2","TCGCAGACGACGACTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94Y D98V V173N",3
"lib2","SARS-CoV-2","TCGCAGAGATGGCAAT",3,27.29,10.4,-0.43,0.08,2.89,1.05,0,"1 nonsynonymous","A14M",1
"lib2","SARS-CoV-2","TCGCAGAGTACCCACG",3,39.57,10.53,-0.3,0.07,2.82,1.02,0,">1 nonsynonymous","S41N P133R",2
"lib2","SARS-CoV-2","TCGCAGCAAGACATCC",1,34.33,6,-4.84,2,3,1.13,0,">1 nonsynonymous","N92L D97S E141K C158S",4
"lib2","SARS-CoV-2","TCGCAGCATTCGCACT",1,24.04,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","G86W F160T Y175I",3
"lib2","SARS-CoV-2","TCGCAGCCAAGCTAGA",6,0.25,NA,NA,NA,NA,NA,NA,"stop","S41Y D98S T140N F167* Q176W",5
"lib2","SARS-CoV-2","TCGCAGCGCATGAGAA",12,153.11,8.11,-2.73,0.15,1.94,1.12,0.01,">1 nonsynonymous","I2L N58E N107L",3
"lib2","SARS-CoV-2","TCGCAGGCCCCCGACC",1,0.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I C49G P96L K128Y",4
"lib2","SARS-CoV-2","TCGCAGGCTAACTCAA",2,30.54,10.8,-0.04,0.06,2.99,1.06,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TCGCAGGGAGCACACG",4,118.14,10.22,-0.62,0.04,2.94,1.03,0,">1 nonsynonymous","L38F S43R D97E A145T",4
"lib2","SARS-CoV-2","TCGCAGTTATCAGCTT",7,8.61,NA,NA,NA,NA,NA,NA,"stop","N4L E10K F99V Y175*",4
"lib2","SARS-CoV-2","TCGCATAAACAAGTGA",5,34.9,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S36G I104K G174A",3
"lib2","SARS-CoV-2","TCGCATAAGTGATTCA",3,84.46,10.66,-0.18,0.04,2.93,1.06,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","TCGCATAATTTTCGGA",4,10.46,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","G86L N130L G155A G174K",4
"lib2","SARS-CoV-2","TCGCATATACTTTGCT",7,69.73,6.32,-4.52,0.52,1.5,1.15,0.02,">1 nonsynonymous","A14V T63N C102L",3
"lib2","SARS-CoV-2","TCGCATATTAAGACTG",15,98.9,6,-4.84,1.89,1.5,1.16,0.01,">1 nonsynonymous","A67F G101N N107F C150G R179A S200I",6
"lib2","SARS-CoV-2","TCGCATCAAGATCACG",1,80.34,7.86,-2.98,0.1,2.18,1.08,0,">1 nonsynonymous","A33F T46S C150T P197S",4
"lib2","SARS-CoV-2","TCGCATCATGAAAGGA",7,82.77,10.1,-0.74,0.05,2.82,1.05,0,">1 nonsynonymous","T100H T140W T148I",3
"lib2","SARS-CoV-2","TCGCATCTGTAAGGAC",5,87.81,9.91,-0.92,0.06,2.91,1.1,0,">1 nonsynonymous","F160E G166S",2
"lib2","SARS-CoV-2","TCGCATCTTAACCATA",1,15.92,10.92,0.09,0.09,2.94,1.09,0,"1 nonsynonymous","I72V",1
"lib2","SARS-CoV-2","TCGCATGCACAAGAGT",10,105.82,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T85L A105F I142H V153W",4
"lib2","SARS-CoV-2","TCGCATGGCGATGAAA",7,240.58,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","G172K",1
"lib2","SARS-CoV-2","TCGCATGGCTCATTCT",18,486.35,8.03,-2.81,0.15,1.82,1.09,0.01,">1 nonsynonymous","G9A G116E Q144R Q176S L187S",5
"lib2","SARS-CoV-2","TCGCATGTTTTAATAC",8,101.27,10.21,-0.63,0.07,2.58,1.03,0,">1 nonsynonymous","T55S V77Q",2
"lib2","SARS-CoV-2","TCGCATTCGGATCAGC",2,12.87,6.37,-4.47,0.76,1.5,1.15,0.05,">1 nonsynonymous","D90V Y121H S129K I142H",4
"lib2","SARS-CoV-2","TCGCATTGGAGAAACC",6,110.06,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D68W G166I Q176L A192K",4
"lib2","SARS-CoV-2","TCGCCAAAACTTTGTT",7,70.89,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L38H E76K",2
"lib2","SARS-CoV-2","TCGCCAAAAGGTTAAA",3,48.51,9.69,-1.14,0.07,2.79,1.02,0,">1 nonsynonymous","D98L F160L G174A",3
"lib2","SARS-CoV-2","TCGCCAAAATCCGTGC",1,35.7,11.1,0.26,0.08,2.93,1.06,0,">1 nonsynonymous","P149S Q168Y",2
"lib2","SARS-CoV-2","TCGCCAAACAGAATAT",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R C61F T201V",3
"lib2","SARS-CoV-2","TCGCCAACAGTCCTAA",12,92.71,10.72,-0.12,0.03,2.92,1.1,0,">1 nonsynonymous","C61P T140R",2
"lib2","SARS-CoV-2","TCGCCAACTTACATAA",2,122.12,10.75,-0.08,0.06,2.92,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGCCAATACTCAAAA",6,115.91,8.66,-2.17,0.08,2.05,1.05,0,">1 nonsynonymous","Q84E Y121S P149H",3
"lib2","SARS-CoV-2","TCGCCAATAGGGCCTA",8,141.92,10.82,-0.02,0.05,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGCCAATATCGACAA",3,59.34,10.53,-0.3,0.03,2.96,1.05,0,"1 nonsynonymous","D98C",1
"lib2","SARS-CoV-2","TCGCCACGGCGAGCTT",14,275.34,9.13,-1.7,0.03,2.93,1.07,0,">1 nonsynonymous","N64F T170L T201S",3
"lib2","SARS-CoV-2","TCGCCACTGACTTCAT",3,53.58,10.38,-0.46,0.04,2.89,1.11,0,">1 nonsynonymous","D59N Y123R",2
"lib2","SARS-CoV-2","TCGCCACTGAGCGATA",18,8.84,NA,NA,NA,NA,NA,NA,"stop","K26S K87* D90L K132R K199I",5
"lib2","SARS-CoV-2","TCGCCAGGCAAGAATG",15,106.8,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T55M G101Q N107P Y119K",4
"lib2","SARS-CoV-2","TCGCCAGTAAACCAGT",10,78.23,10.2,-0.64,0.08,2.63,1.1,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","TCGCCATTATGCGACA",1,14.17,9.72,-1.11,0.2,1.86,1.01,0.01,"1 nonsynonymous","F12R",1
"lib2","SARS-CoV-2","TCGCCATTTAATACAA",5,24.41,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T100H R124N N171V K198T",4
"lib2","SARS-CoV-2","TCGCCCACGGCGCCGA",4,1.46,NA,NA,NA,NA,NA,NA,"stop","K87* L95V D97N F156*",4
"lib2","SARS-CoV-2","TCGCCCAGCAACCCGA",9,0.05,NA,NA,NA,NA,NA,NA,"stop","D90* G166T",2
"lib2","SARS-CoV-2","TCGCCCATCACCCAGG",1,15.54,10.9,0.06,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGCCCCTCCTCTTCA",8,77.92,7.56,-3.28,0.26,1.5,1.06,0.03,">1 nonsynonymous","S45V V52F R179K",3
"lib2","SARS-CoV-2","TCGCCCCTGCTCAACT",4,156.22,9.26,-1.58,0.05,2.88,1.11,0,">1 nonsynonymous","G117L K199S",2
"lib2","SARS-CoV-2","TCGCCCGCCACTCTGT",7,32.12,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G9K D59T A89L Y119R",4
"lib2","SARS-CoV-2","TCGCCCGGATATTATA",5,10.73,10.78,-0.06,0.04,3,1.01,0,">1 nonsynonymous","S43L I104L",2
"lib2","SARS-CoV-2","TCGCCCTAATTGTCAC",1,1.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26L K56G F99L",3
"lib2","SARS-CoV-2","TCGCCCTAGAGTTCAG",9,96.29,6.77,-4.07,0.3,1.5,1.1,0.01,">1 nonsynonymous","G146M N151F P169Q",3
"lib2","SARS-CoV-2","TCGCCCTGAGCTACTA",1,20.82,10.87,0.03,0.11,2.98,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGCCCTGGCTTCCCG",5,73.49,10,-0.83,0.05,2.82,1.08,0,"1 nonsynonymous","Y121K",1
"lib2","SARS-CoV-2","TCGCCCTGTAAATCTT",3,98.62,6,-4.84,2,3,1.18,0,">1 nonsynonymous","S29Y G86S N107L",3
"lib2","SARS-CoV-2","TCGCCGAAATCTGCCT",9,38.9,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","N92R I104Y C150R T201L",4
"lib2","SARS-CoV-2","TCGCCGAACGTGCCCA",5,1.66,NA,NA,NA,NA,NA,NA,"stop","K56* Q168N",2
"lib2","SARS-CoV-2","TCGCCGACATCACCTA",2,47.74,7.54,-3.3,0.17,1.5,1.1,0.01,">1 nonsynonymous","Y21R T201R",2
"lib2","SARS-CoV-2","TCGCCGACCAACTAAT",1,32.04,10.87,0.03,0.08,2.93,1.08,0,">1 nonsynonymous","L122M P197Y",2
"lib2","SARS-CoV-2","TCGCCGACCTTCTAAT",5,22.53,6.85,-3.99,0.39,1.5,1.13,0.03,">1 nonsynonymous","C61W I104D N157S",3
"lib2","SARS-CoV-2","TCGCCGACTACATGTA",4,87.59,9.73,-1.1,0.09,2.4,1.02,0,">1 nonsynonymous","C31R A89S",2
"lib2","SARS-CoV-2","TCGCCGAGGTACACCT",10,187.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D34R N107V G172M",3
"lib2","SARS-CoV-2","TCGCCGATGTTGTAAT",3,15.87,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","N4P Y143M R179H",3
"lib2","SARS-CoV-2","TCGCCGCCCAATACTA",9,2.92,NA,NA,NA,NA,NA,NA,"stop","D90S Y159T G196*",3
"lib2","SARS-CoV-2","TCGCCGCCTTCCAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L95K L122* V173S",3
"lib2","SARS-CoV-2","TCGCCGGTTAAGCTAA",9,181.72,10.69,-0.14,0.05,2.81,1.21,0,"1 nonsynonymous","V173N",1
"lib2","SARS-CoV-2","TCGCCTAAAGTTGAGA",10,93.25,10.74,-0.09,0.03,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGCCTAATACAGGGT",7,5.08,NA,NA,NA,NA,NA,NA,"stop","N1K F8* G51N T170E R179Q",5
"lib2","SARS-CoV-2","TCGCCTACAAAAATAA",6,43.53,8.75,-2.08,0.31,1.5,1,0.03,">1 nonsynonymous","K56V A89G P149I S184I",4
"lib2","SARS-CoV-2","TCGCCTACCAACATTC",11,109.16,7.03,-3.8,0.16,1.5,1.15,0.01,">1 nonsynonymous","G9D G86L S147L",3
"lib2","SARS-CoV-2","TCGCCTATGGAGCGAG",1,37.49,10.75,-0.08,0.06,2.86,1.15,0,"1 nonsynonymous","L122C",1
"lib2","SARS-CoV-2","TCGCCTCATCTGCTCT",2,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14R D34T S200N",3
"lib2","SARS-CoV-2","TCGCCTCCCCCTCCTA",2,53.62,9.28,-1.56,0.17,2.03,1.17,0.01,"1 nonsynonymous","K94L",1
"lib2","SARS-CoV-2","TCGCCTCTGACAGGTA",6,0.24,NA,NA,NA,NA,NA,NA,"stop","S43* A89* P133W N151T Y165P",5
"lib2","SARS-CoV-2","TCGCCTGACGGATGCT",11,3.54,NA,NA,NA,NA,NA,NA,"stop","F70A P82T Y91T K114* Q163W T170C T201N",7
"lib2","SARS-CoV-2","TCGCCTTACGTACACT",4,0.17,NA,NA,NA,NA,NA,NA,"stop","G9P S129L P133* P149T",4
"lib2","SARS-CoV-2","TCGCCTTCGTATAAAT",15,80.36,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G9R N107I I142D",3
"lib2","SARS-CoV-2","TCGCCTTTACAAGTCT",6,2.5,NA,NA,NA,NA,NA,NA,"stop","C49P Q84* T201R",3
"lib2","SARS-CoV-2","TCGCGAAAACTAAGGT",3,25.94,8.48,-2.35,0.23,2.62,1.2,0.02,">1 nonsynonymous","S45Q L125K",2
"lib2","SARS-CoV-2","TCGCGACAGCGTGTAA",2,7.64,10.93,0.1,0.09,2.84,1.17,0,"1 nonsynonymous","G9Y",1
"lib2","SARS-CoV-2","TCGCGACGCATTAAGC",5,80.99,10.21,-0.63,0.05,2.75,1.02,0,">1 nonsynonymous","L57R T201E",2
"lib2","SARS-CoV-2","TCGCGACTATAGACCG",6,53.27,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","S19E R27L Y121H I138N",4
"lib2","SARS-CoV-2","TCGCGAGTTTTCACGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34H V65G P82D C102Q T140L G155R F167H",7
"lib2","SARS-CoV-2","TCGCGCAATTCAAAAC",2,79.56,10.89,0.06,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGCGCGATGTCACAA",9,28.57,9.87,-0.96,0.11,2.1,1,0.01,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","TCGCGCGTGGCGCTAG",7,9.85,6.25,-4.58,0.38,3,1.19,0.01,">1 nonsynonymous","G83L K94Y E141H",3
"lib2","SARS-CoV-2","TCGCGCTCAGCTTGTA",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72H E154V",2
"lib2","SARS-CoV-2","TCGCGGCAAACCTAGC",10,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T D34H D97T C102Q N107L",5
"lib2","SARS-CoV-2","TCGCGGTAAGATTTCT",1,0.87,NA,NA,NA,NA,NA,NA,"stop","V65M K114* C150A S200L",4
"lib2","SARS-CoV-2","TCGCGGTCGACCTATC",34,217.7,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25Y L95N P177R",3
"lib2","SARS-CoV-2","TCGCGTCATACAATCC",4,2.26,NA,NA,NA,NA,NA,NA,"stop","A42* K94T A105G T170F",4
"lib2","SARS-CoV-2","TCGCGTGACATTGATG",16,164.62,10.62,-0.22,0.03,2.97,1.06,0,">1 nonsynonymous","T55G G174A",2
"lib2","SARS-CoV-2","TCGCGTTAAATGAATT",6,1.57,NA,NA,NA,NA,NA,NA,"stop","A18M S45L P82Y N107*",4
"lib2","SARS-CoV-2","TCGCGTTTCACAGAAA",1,0.57,NA,NA,NA,NA,NA,NA,"stop","D98*",1
"lib2","SARS-CoV-2","TCGCTAAACCACGTGA",6,0.17,NA,NA,NA,NA,NA,NA,"stop","V77T E141*",2
"lib2","SARS-CoV-2","TCGCTAAAGGCGGATT",16,76.3,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","K26P G117V S147I",3
"lib2","SARS-CoV-2","TCGCTAAAGTTTCTCC",5,114.53,10.2,-0.64,0.03,2.87,1.09,0,"1 nonsynonymous","Y35H",1
"lib2","SARS-CoV-2","TCGCTAACAATCATAA",3,35.8,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F8E V32T G86K N107R",4
"lib2","SARS-CoV-2","TCGCTAACGTTCTGGC",5,5.1,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6W N13W K132G",3
"lib2","SARS-CoV-2","TCGCTACAAAAAAACA",3,100.5,10.84,0,0.08,2.87,1.13,0,">1 nonsynonymous","T55N L188S",2
"lib2","SARS-CoV-2","TCGCTACACAATGATA",10,40.87,8.02,-2.82,0.28,1.5,1.05,0.04,"1 nonsynonymous","L183A",1
"lib2","SARS-CoV-2","TCGCTAGACAGGATAG",9,0.72,NA,NA,NA,NA,NA,NA,"stop","G74L D137G V180*",3
"lib2","SARS-CoV-2","TCGCTAGCCGGCTAGT",3,37.48,10.05,-0.78,0.09,2.37,1,0,">1 nonsynonymous","A89S S139H Q163T",3
"lib2","SARS-CoV-2","TCGCTAGGATAGAAAC",1,2.41,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCGCTAGGGGATATCG",7,131.63,10.16,-0.67,0.03,2.96,1.06,0,"1 nonsynonymous","Y175H",1
"lib2","SARS-CoV-2","TCGCTATTAACCCATC",2,24.96,10.37,-0.46,0.06,2.92,1,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TCGCTCAAACGAACAT",1,0.07,NA,NA,NA,NA,NA,NA,"stop","C6V G51Q G116*",3
"lib2","SARS-CoV-2","TCGCTCAGCGACACGT",2,52.93,10.66,-0.17,0.05,2.91,1.06,0,">1 nonsynonymous","T63A T85M",2
"lib2","SARS-CoV-2","TCGCTCATCCTCTATT",12,162.19,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R16K F156M F167E G172A",4
"lib2","SARS-CoV-2","TCGCTCTAATTAAGGA",1,58.15,10.24,-0.6,0.06,2.75,1.1,0,">1 nonsynonymous","L5N L183V",2
"lib2","SARS-CoV-2","TCGCTCTGACCATATA",2,89.74,9.56,-1.27,0.07,2.8,1.05,0,">1 nonsynonymous","T140N G146F",2
"lib2","SARS-CoV-2","TCGCTCTGACTATTAT",3,1.43,NA,NA,NA,NA,NA,NA,"stop","G86W D112N N120S K199*",4
"lib2","SARS-CoV-2","TCGCTCTTGATTACCT",8,1.91,NA,NA,NA,NA,NA,NA,"stop","N4T L38* A105M L125C",4
"lib2","SARS-CoV-2","TCGCTGACACGGTCAA",7,80.83,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T55I S129D Y159T",3
"lib2","SARS-CoV-2","TCGCTGACCAATTGTG",1,27.97,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","I88R",1
"lib2","SARS-CoV-2","TCGCTGGAACTCGACC",8,40.93,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4A L38P G83S T100N P133L",5
"lib2","SARS-CoV-2","TCGCTGTTGATTGAGT",1,19.7,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","S45Y V182R",2
"lib2","SARS-CoV-2","TCGCTTAACAGAATGT",8,113.23,10.15,-0.69,0.06,2.82,1,0,">1 nonsynonymous","C6A V37G",2
"lib2","SARS-CoV-2","TCGCTTAACCATATCG",2,78.3,6,-4.84,2,3,1.22,0,">1 nonsynonymous","R25T L38M D59V T63P P133L Q144S N157T G166T",8
"lib2","SARS-CoV-2","TCGCTTCCCAGATCGC",1,16.8,10.63,-0.2,0.07,2.96,1,0,">1 nonsynonymous","N1S K128Y T148Y",3
"lib2","SARS-CoV-2","TCGCTTCCTATAAAAA",2,87.67,10.87,0.04,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGCTTCGGACAACAC",10,174.54,9.53,-1.31,0.04,2.93,1.07,0,">1 nonsynonymous","S43K G83K Y119S",3
"lib2","SARS-CoV-2","TCGCTTCTGAATCCAA",4,9.96,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","C49Y E141F G172V",3
"lib2","SARS-CoV-2","TCGCTTGATCAATTGC",5,44.64,10.22,-0.61,0.04,2.99,1,0,">1 nonsynonymous","G155D S200V",2
"lib2","SARS-CoV-2","TCGCTTTAGTTTAGCT",6,175.54,9.99,-0.84,0.06,2.4,1.03,0,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","TCGCTTTCACCCATTT",7,110.27,10.78,-0.05,0.05,2.92,1.08,0,"1 nonsynonymous","T55H",1
"lib2","SARS-CoV-2","TCGCTTTCACCTAAAT",8,116.28,10.75,-0.09,0.08,2.77,1.11,0,"1 nonsynonymous","D97Y",1
"lib2","SARS-CoV-2","TCGGAAAAAAAATTCG",6,127.83,10.19,-0.64,0.03,2.92,1.01,0,">1 nonsynonymous","V52H C61I",2
"lib2","SARS-CoV-2","TCGGAAAAGATAAATC",2,67.08,10.07,-0.77,0.27,1.53,1.1,0.03,">1 nonsynonymous","G9N C31K F47M",3
"lib2","SARS-CoV-2","TCGGAAACCTCACAAT",2,30.22,8.16,-2.68,0.14,2.74,1.08,0.01,">1 nonsynonymous","C6I K87D",2
"lib2","SARS-CoV-2","TCGGAAACTGGCCCGC",2,26.24,8.75,-2.09,0.21,1.5,1,0.02,">1 nonsynonymous","I2S F44Y R136G P149L",4
"lib2","SARS-CoV-2","TCGGAACAAATTGACT",2,26.5,9.55,-1.29,0.06,1.91,1.1,0,">1 nonsynonymous","S29H W106H",2
"lib2","SARS-CoV-2","TCGGAACCTATTAGAC",2,9.58,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S19I A33L F99L T201S",4
"lib2","SARS-CoV-2","TCGGAATCTAATCGAA",12,95.83,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","C6V G51S L95N I104F",4
"lib2","SARS-CoV-2","TCGGAATGACCGTAAA",3,44.19,7.34,-3.49,0.41,1.5,1.17,0.06,">1 nonsynonymous","I2E Y35N T85K F167H Q176R",5
"lib2","SARS-CoV-2","TCGGAATTACCCATAC",2,64.56,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","K56P Q176P",2
"lib2","SARS-CoV-2","TCGGAATTCCCAATAA",16,186.44,9.95,-0.89,0.06,2.69,1.09,0,">1 nonsynonymous","C31V C61Y",2
"lib2","SARS-CoV-2","TCGGACAAAAGCACCG",3,59.38,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10V Y39N W106R Q176E",4
"lib2","SARS-CoV-2","TCGGACACAAATTTTC",3,6.97,6,-4.84,2,1.5,1.14,0.05,">1 nonsynonymous","D34V C102L I142N",3
"lib2","SARS-CoV-2","TCGGACATAGCAGATA",3,27.4,6.66,-4.18,0.31,1.61,1.09,0.02,">1 nonsynonymous","A42V Y123T Q176M",3
"lib2","SARS-CoV-2","TCGGACCAAAATCTAG",13,65.97,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C6F C49K C158Y",3
"lib2","SARS-CoV-2","TCGGACCACAAAAAAA",4,111.68,9.96,-0.88,0.03,2.85,1.07,0,">1 nonsynonymous","N118Y P149K",2
"lib2","SARS-CoV-2","TCGGACCTAGCAACCA",6,72.97,10.8,-0.04,0.05,2.95,1.04,0,">1 nonsynonymous","G9F T201S",2
"lib2","SARS-CoV-2","TCGGACCTTTATGGAT",4,58.62,6,-4.84,1.35,1.5,1.24,0.03,">1 nonsynonymous","C6G G86N D97C G155T S164I K198T",6
"lib2","SARS-CoV-2","TCGGACGATTTTCTGA",10,78.59,10.07,-0.77,0.09,2.53,1.07,0,">1 nonsynonymous","Y35R F62Y",2
"lib2","SARS-CoV-2","TCGGACGCGGGCAGAC",1,75.36,10.85,0.01,0.07,2.99,1.03,0,"1 nonsynonymous","V173H",1
"lib2","SARS-CoV-2","TCGGACGCTCATGAAA",7,96.32,10.53,-0.31,0.05,3,1,0,"1 nonsynonymous","R136H",1
"lib2","SARS-CoV-2","TCGGACGGTTTCCTTA",2,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V V37F D90A",3
"lib2","SARS-CoV-2","TCGGACTAACCTCGAC",1,6.89,8.2,-2.64,0.32,1.5,1.09,0.03,">1 nonsynonymous","Y35H F99Y K114R",3
"lib2","SARS-CoV-2","TCGGACTCCAATAAAC",3,1.83,NA,NA,NA,NA,NA,NA,"stop","S147F G155V K199*",3
"lib2","SARS-CoV-2","TCGGACTTAAAATATA",4,6.18,10.01,-0.83,0.34,2.59,1.07,0.06,">1 nonsynonymous","T15V F99Q V103S F156H G166H",5
"lib2","SARS-CoV-2","TCGGAGAAATTACGCG",6,63.49,7.45,-3.38,0.32,1.5,1.19,0.03,">1 nonsynonymous","V52H G83S D97C S129D S139T T170S",6
"lib2","SARS-CoV-2","TCGGAGAGCTTATTTA",1,12.49,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S41P V103N N118H",3
"lib2","SARS-CoV-2","TCGGAGATCCCAATCA",7,0.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21S L60H",2
"lib2","SARS-CoV-2","TCGGAGGTTTAAATCA",5,217.73,10.68,-0.16,0.04,2.9,1.04,0,"1 nonsynonymous","P197L",1
"lib2","SARS-CoV-2","TCGGAGTTGAATCGCT",2,19.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V T46I D68M S139N",4
"lib2","SARS-CoV-2","TCGGAGTTTTACACAG",4,57.27,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V11R Y123I G146K",3
"lib2","SARS-CoV-2","TCGGATCACAAGGTAT",9,109.99,10.86,0.03,0.06,2.92,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGGATCCTGATTTGC",7,151.15,10.59,-0.25,0.05,2.88,1.07,0,"1 nonsynonymous","S41P",1
"lib2","SARS-CoV-2","TCGGATCTTCCGACGC",3,13.62,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V20T K94V L162S S200M",4
"lib2","SARS-CoV-2","TCGGATGATGCGAACA",3,101.36,9.98,-0.86,0.05,2.63,1.07,0,">1 nonsynonymous","N40V P169T",2
"lib2","SARS-CoV-2","TCGGATGCGTACCACA",1,0,NA,NA,NA,NA,NA,NA,"stop","K48* W106M F134R G174M",4
"lib2","SARS-CoV-2","TCGGATTATAAAATAG",4,39.88,10.54,-0.29,0.05,2.97,1.03,0,">1 nonsynonymous","T55L T63L G196C",3
"lib2","SARS-CoV-2","TCGGATTGGACTCCTA",7,166.85,10.06,-0.78,0.05,2.59,1.01,0,">1 nonsynonymous","A14V V37L N120L",3
"lib2","SARS-CoV-2","TCGGATTGGGCCAGAA",1,29.37,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","G9R V77N D90P",3
"lib2","SARS-CoV-2","TCGGCAAAATCTCCCT",10,120.39,10.38,-0.46,0.04,2.98,1.05,0,">1 nonsynonymous","G9S K87N",2
"lib2","SARS-CoV-2","TCGGCACGACTTCAGC",8,38.67,6.62,-4.22,0.4,1.5,1.05,0.02,">1 nonsynonymous","R27V I104K T170E",3
"lib2","SARS-CoV-2","TCGGCCAAAGGCATTC",6,0.69,NA,NA,NA,NA,NA,NA,"stop","F44* A81Y",2
"lib2","SARS-CoV-2","TCGGCCAAGCTAAAGC",10,148.72,10.71,-0.12,0.03,2.92,1.08,0,"1 nonsynonymous","V52T",1
"lib2","SARS-CoV-2","TCGGCCACTACTAAAT",7,127.64,10.65,-0.19,0.05,2.9,1.05,0,">1 nonsynonymous","D97A I138S",2
"lib2","SARS-CoV-2","TCGGCCCACGACATAA",1,34.92,10.5,-0.34,0.1,2.87,1.14,0.01,">1 nonsynonymous","K87T I104F",2
"lib2","SARS-CoV-2","TCGGCCCCTCGATTCC",9,0.51,NA,NA,NA,NA,NA,NA,"stop","E10V W23C K56*",3
"lib2","SARS-CoV-2","TCGGCCGTCAAGCAAT",5,15.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","TCGGCGAACTGGATAA",5,69.65,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y91S T100P",2
"lib2","SARS-CoV-2","TCGGCGGGCCAGCATA",4,26.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49T S113Y",2
"lib2","SARS-CoV-2","TCGGCTCAAAGATGCC",1,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R C150L T201N",3
"lib2","SARS-CoV-2","TCGGCTCCCCGTGCGC",5,54.36,10.58,-0.25,0.05,3,1.02,0,">1 nonsynonymous","A42G E154N",2
"lib2","SARS-CoV-2","TCGGCTCCCGAATAAA",9,48.9,7.97,-2.87,0.19,1.52,1.09,0.01,">1 nonsynonymous","Q84K N92D",2
"lib2","SARS-CoV-2","TCGGCTCTGGCAGCAT",6,250.99,9.62,-1.21,0.03,2.92,1.06,0,"1 nonsynonymous","F156C",1
"lib2","SARS-CoV-2","TCGGCTGTCATAACGG",5,81.11,9.53,-1.31,0.07,1.98,1.09,0,">1 nonsynonymous","V37P Y121W E141R",3
"lib2","SARS-CoV-2","TCGGCTTGAGAGATCG",2,79.27,8.13,-2.7,0.15,1.87,1.06,0.01,">1 nonsynonymous","V11W F62G A145Y P197T",4
"lib2","SARS-CoV-2","TCGGCTTTTCTAGAAA",10,183.49,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R16I V37A I88S A145E",4
"lib2","SARS-CoV-2","TCGGGAAATTAAAATG",11,208.27,6,-4.84,2,1.5,1.21,0,">1 nonsynonymous","R73E D90Y R124F",3
"lib2","SARS-CoV-2","TCGGGAACCTTATGTG",8,128,10.83,0,0.04,2.96,1.06,0,"1 nonsynonymous","D98N",1
"lib2","SARS-CoV-2","TCGGGAACGCATAGGG",9,79.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S41T S69G L131T Q168F C195V",5
"lib2","SARS-CoV-2","TCGGGAGAAATTGTCC",1,10.5,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C49S S113C T170S T201S",4
"lib2","SARS-CoV-2","TCGGGAGCATCACGCG",7,72.29,8.43,-2.41,0.18,1.53,1.12,0.02,">1 nonsynonymous","A105N P169S",2
"lib2","SARS-CoV-2","TCGGGAGTTTTATCAA",2,24.48,6.84,-4,0.4,1.5,1.06,0.05,">1 nonsynonymous","G9F C61I I88S",3
"lib2","SARS-CoV-2","TCGGGATAAAATATTC",4,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69V V77T",2
"lib2","SARS-CoV-2","TCGGGATCGCATGATA",1,0.14,NA,NA,NA,NA,NA,NA,"stop","G86V T100G N107M N120P K132M G155*",6
"lib2","SARS-CoV-2","TCGGGCCATATAAGGA",4,29.54,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N92D A105Y",2
"lib2","SARS-CoV-2","TCGGGCCGAGATCACA",4,92.47,6,-4.84,2,2.61,1.15,0,">1 nonsynonymous","L5M C31F P133C Q176R",4
"lib2","SARS-CoV-2","TCGGGCCTGGAAGCGT",2,49.59,8.08,-2.76,0.27,1.5,1.11,0.04,">1 nonsynonymous","A14S W23R V153A T201S",4
"lib2","SARS-CoV-2","TCGGGGAAATTATATG",11,61.37,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N1D K26M G101C W106D S139I Y175I",6
"lib2","SARS-CoV-2","TCGGGGCTTAATACTA",9,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22N Q168S",2
"lib2","SARS-CoV-2","TCGGGGTCAGCGACGC",5,45.49,6.03,-4.81,1.74,1.5,1.24,0.05,">1 nonsynonymous","F99R A145M",2
"lib2","SARS-CoV-2","TCGGGTCACAACCTAA",9,43.1,6.04,-4.8,0.97,1.5,1.15,0.02,">1 nonsynonymous","C6K R25V V37F N92Y V182H",5
"lib2","SARS-CoV-2","TCGGGTCAGGACGGTC",1,0,NA,NA,NA,NA,NA,NA,"stop","N13S K56E G146* P161Y",4
"lib2","SARS-CoV-2","TCGGTAATCACTATGC",2,47.6,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C6S Y175G",2
"lib2","SARS-CoV-2","TCGGTACATGCTCCAA",5,42.41,6,-4.84,2,3,1.24,0,">1 nonsynonymous","K94W E141F T148G L162W T201M",5
"lib2","SARS-CoV-2","TCGGTACCCAGATACC",6,129.96,7.72,-3.12,0.11,2.26,1.11,0,"1 nonsynonymous","C158A",1
"lib2","SARS-CoV-2","TCGGTACGCAACAGAA",9,63.32,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","A14I P161F",2
"lib2","SARS-CoV-2","TCGGTATCGGTCAGAA",5,19.22,8.84,-1.99,0.19,1.5,1,0.01,">1 nonsynonymous","C6S W106S",2
"lib2","SARS-CoV-2","TCGGTATCTTTAGGCC",2,11.99,6,-4.84,2,1.5,1.15,0.04,"1 nonsynonymous","F70S",1
"lib2","SARS-CoV-2","TCGGTATTACGTACGG",10,62.5,6,-4.84,1.07,1.5,1.15,0.01,">1 nonsynonymous","W23S D90L Y159H",3
"lib2","SARS-CoV-2","TCGGTATTATACCATA",2,24.63,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C61M G172H V181C",3
"lib2","SARS-CoV-2","TCGGTCAACAATATTC",6,126.36,10.65,-0.19,0.02,3,1.02,0,">1 nonsynonymous","F134L V153S",2
"lib2","SARS-CoV-2","TCGGTCAGGATATTGT",7,48.25,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R27N W106D F167L",3
"lib2","SARS-CoV-2","TCGGTCCCAAGCCTCT",5,94.58,10.51,-0.33,0.04,2.97,1.02,0,">1 nonsynonymous","L60G R78E",2
"lib2","SARS-CoV-2","TCGGTCGAATCAATTA",12,163.75,10.55,-0.29,0.04,2.89,1.08,0,">1 nonsynonymous","F62V A89S V194L",3
"lib2","SARS-CoV-2","TCGGTCTGGCCCGCAA",1,7.99,6,-4.84,2,1.57,1.13,0.02,">1 nonsynonymous","K87S V103G I142L",3
"lib2","SARS-CoV-2","TCGGTGCAGCCGAATA",8,16.87,NA,NA,NA,NA,NA,NA,"stop","I88K W106* G172I",3
"lib2","SARS-CoV-2","TCGGTGCTTAATAGCA",18,438.5,9.31,-1.52,0.05,2.13,1.08,0,">1 nonsynonymous","N40E N107T",2
"lib2","SARS-CoV-2","TCGGTGGCAATTGTAA",11,56.71,8.15,-2.69,0.23,1.53,1.14,0.02,">1 nonsynonymous","T3Q A42V G86D G174R P197C",5
"lib2","SARS-CoV-2","TCGGTGTTGTATGTAA",2,14.57,10.28,-0.55,0.08,2.85,1.06,0.01,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","TCGGTTCTGATACCAA",1,17.58,9.81,-1.02,0.15,2.24,1,0.01,">1 nonsynonymous","A14L N151P",2
"lib2","SARS-CoV-2","TCGGTTTGGACACCTT",2,2.56,NA,NA,NA,NA,NA,NA,"stop","I28* Y39V D90Q C102R T140L P149S",6
"lib2","SARS-CoV-2","TCGGTTTTTGACTGAA",5,5.98,NA,NA,NA,NA,NA,NA,"stop","P54Q Y119* R127L T140Y G152D F156M T201S",7
"lib2","SARS-CoV-2","TCGTAAAAAATAGCCT",5,34.61,8.67,-2.17,0.31,1.5,1,0.05,">1 nonsynonymous","P96Y N120G",2
"lib2","SARS-CoV-2","TCGTAAACGTCCAACT",4,47.33,8.84,-2,0.16,1.5,1.08,0.01,">1 nonsynonymous","Y35H E135R",2
"lib2","SARS-CoV-2","TCGTAACACTGCGTGT",2,29.1,10.82,-0.01,0.07,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGTAACCTGCTCGTA",4,68.23,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F70V G86H P96S T100Q G117C S139E T201R",7
"lib2","SARS-CoV-2","TCGTAATTATTGGACA",11,90.93,10.97,0.14,0.05,2.93,1.07,0,">1 nonsynonymous","T85R F160A T201G",3
"lib2","SARS-CoV-2","TCGTACAAACTACAGA",1,39.12,10.58,-0.26,0.07,2.97,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TCGTACAGAGCTATTA",1,10.68,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","P96Y E141N P149L",3
"lib2","SARS-CoV-2","TCGTACCACTATATAG",5,67.45,10.84,0,0.05,2.85,1.13,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","TCGTACTATAGCCACA",2,24.94,10.76,-0.08,0.04,2.96,1.06,0,">1 nonsynonymous","L5S V37F K114L",3
"lib2","SARS-CoV-2","TCGTACTCCACCTGTC",7,34.24,10.44,-0.4,0.06,2.75,1.25,0,">1 nonsynonymous","R27K N64G D97V",3
"lib2","SARS-CoV-2","TCGTACTCTCTTACGA",8,127.31,10.85,0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCGTATAACTAGAGTG",1,8.69,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A22D S41L Y165P",3
"lib2","SARS-CoV-2","TCGTATGCCTAATAAA",1,30.7,9.88,-0.95,0.11,2.09,1,0.01,">1 nonsynonymous","N1S I28S S164N",3
"lib2","SARS-CoV-2","TCGTATTTTAATTTGC",7,181.72,10.36,-0.48,0.04,2.85,1.07,0,">1 nonsynonymous","N107G S147P",2
"lib2","SARS-CoV-2","TCGTCACTTCCACCAT",4,57.15,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G117A Y143G",2
"lib2","SARS-CoV-2","TCGTCAGAACAACCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5P G117* G196L",3
"lib2","SARS-CoV-2","TCGTCATAAATATGGC",1,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F E10G A14P I72S D90S R136L",6
"lib2","SARS-CoV-2","TCGTCATCAAGTGTAG",1,0.89,NA,NA,NA,NA,NA,NA,"stop","S69* W106T E141Q Q163R",4
"lib2","SARS-CoV-2","TCGTCGCAACGCAGTC",1,16.99,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","Y123L I138M C150M",3
"lib2","SARS-CoV-2","TCGTCGTTCTTGAGAG",2,59.91,10.77,-0.06,0.05,2.95,1.08,0,"1 nonsynonymous","N40T",1
"lib2","SARS-CoV-2","TCGTCTAGTGACCAGC",6,40.57,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G86N W106E L125C",3
"lib2","SARS-CoV-2","TCGTCTATGATGACTT",6,33.55,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","V37T N64I T100K D112K",4
"lib2","SARS-CoV-2","TCGTCTCATCGGTTAA",6,115.86,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K56R C61L K94T R124Q P133S",5
"lib2","SARS-CoV-2","TCGTCTGTGAGCGAAA",4,99.77,9.83,-1,0.05,2.76,1.07,0,">1 nonsynonymous","L38Y N120R I138A",3
"lib2","SARS-CoV-2","TCGTTAACCACTCGAA",3,3.8,NA,NA,NA,NA,NA,NA,"stop","A81L P177* S200T",3
"lib2","SARS-CoV-2","TCGTTAATAAAAATAA",1,8.05,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","C6L V37E P82V E141L",4
"lib2","SARS-CoV-2","TCGTTACAATGATATA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9S L57N G152L L162*",4
"lib2","SARS-CoV-2","TCGTTACATTTTCCGG",1,6.03,10.68,-0.16,0.17,2.54,1.26,0.01,">1 nonsynonymous","G9Y K94H C195T",3
"lib2","SARS-CoV-2","TCGTTACCCAGCATTG",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TCGTTACTTTGCGAGA",7,168.64,10.3,-0.54,0.03,2.91,1.04,0,">1 nonsynonymous","T55C D90R",2
"lib2","SARS-CoV-2","TCGTTAGAACCGATAA",1,1.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I G83S D90S S129F",4
"lib2","SARS-CoV-2","TCGTTATTAACACATT",2,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G172L R179W K199G",3
"lib2","SARS-CoV-2","TCGTTCCGTATATCAA",3,71.6,9.48,-1.36,0.11,1.9,1.09,0,">1 nonsynonymous","A42F A81T I138R",3
"lib2","SARS-CoV-2","TCGTTCGAGCATATAT",5,31.68,6.55,-4.29,0.36,2,1.21,0.01,">1 nonsynonymous","I104W Y119S T148D Y175N",4
"lib2","SARS-CoV-2","TCGTTCGGTCTAAGCA",7,56.94,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L95S P149K",2
"lib2","SARS-CoV-2","TCGTTCTATACTTCCC",6,65.24,9.71,-1.13,0.08,1.95,1.04,0,"1 nonsynonymous","W23C",1
"lib2","SARS-CoV-2","TCGTTGCTAACGTAAA",2,1.1,NA,NA,NA,NA,NA,NA,"stop","S41* S69E G83I A89K F99N L122M S139V",7
"lib2","SARS-CoV-2","TCGTTGGTCAACAATC",9,1.77,NA,NA,NA,NA,NA,NA,"stop","K26* C31T",2
"lib2","SARS-CoV-2","TCGTTTACGCCGCGTT",12,95.77,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","F99N",1
"lib2","SARS-CoV-2","TCGTTTACTAAGAGTG",9,80.75,8.97,-1.86,0.15,1.5,1.06,0.01,">1 nonsynonymous","Y50L K56N",2
"lib2","SARS-CoV-2","TCGTTTACTGATCTAA",3,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129N G174K",2
"lib2","SARS-CoV-2","TCGTTTCCAATCAAGT",12,310.17,8.18,-2.65,0.13,2.3,1.09,0.01,">1 nonsynonymous","A105G G166E",2
"lib2","SARS-CoV-2","TCGTTTGCCGACTGCA",4,12.2,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N13P N40S Q84L D90V D98N R136S G146Y",7
"lib2","SARS-CoV-2","TCGTTTTTACAATCGT",9,49.2,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y35R K94I",2
"lib2","SARS-CoV-2","TCTAAAAAAACTCATG",4,50.55,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60S D90Y N107V Y119C",4
"lib2","SARS-CoV-2","TCTAAAAAAATATTTA",8,149.43,10.4,-0.43,0.03,2.94,1.06,0,">1 nonsynonymous","C61N Y123A",2
"lib2","SARS-CoV-2","TCTAAAAAAGAATTCC",8,118.29,8.44,-2.39,0.08,2.29,1.06,0,">1 nonsynonymous","V37L Y165T K199H",3
"lib2","SARS-CoV-2","TCTAAAAAAGCGACAA",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S G86K E135G S164F",4
"lib2","SARS-CoV-2","TCTAAAAAGTCTCGTA",6,152.63,9.08,-1.76,0.04,2.82,1.08,0,">1 nonsynonymous","N64P Y119E",2
"lib2","SARS-CoV-2","TCTAAAAAGTGGGCAA",5,31.18,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C6R P96R S108I",3
"lib2","SARS-CoV-2","TCTAAAAAGTTTCACA",5,35.28,8.76,-2.08,0.09,2.51,1.11,0,">1 nonsynonymous","F44L C61M Y143L",3
"lib2","SARS-CoV-2","TCTAAAACAACTAAGC",3,38.66,6.33,-4.51,0.45,1.5,1.09,0.01,">1 nonsynonymous","F44C I72T S164F V173A",4
"lib2","SARS-CoV-2","TCTAAAACTACAGAAA",6,53.98,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N4A Y121F R127Q E135N P149T T201K",6
"lib2","SARS-CoV-2","TCTAAAACTTAAAGAA",2,17.27,9.15,-1.68,0.18,2.82,1.09,0.02,">1 nonsynonymous","S43A Y119H P133C",3
"lib2","SARS-CoV-2","TCTAAAAGGCACAAAT",5,28.74,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G51K T100L L122M L183P",4
"lib2","SARS-CoV-2","TCTAAAAGGTTACAGA",1,62.26,10.05,-0.79,0.07,2.62,1.03,0,">1 nonsynonymous","Y35Q N40T I72V",3
"lib2","SARS-CoV-2","TCTAAAAGTAGAACTT",2,8.25,8.05,-2.79,0.32,1.8,1.08,0.04,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","TCTAAAAGTGGCATGA",3,19.64,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","D68T Y91S F99N W106E",4
"lib2","SARS-CoV-2","TCTAAAAGTGTAAAAT",1,29.25,8.59,-2.25,0.13,2.46,1.06,0.01,">1 nonsynonymous","F44N R136S T201E",3
"lib2","SARS-CoV-2","TCTAAAATAACATTAT",19,84.58,10.88,0.04,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAAAATCAAGGCAT",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40K P133M",2
"lib2","SARS-CoV-2","TCTAAAATTGTCTCAA",2,35.62,10.81,-0.02,0.08,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAAACAAAAATGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7G A42T Y165H",3
"lib2","SARS-CoV-2","TCTAAACAACGCACAG",3,27.28,10.96,0.12,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAAACACACTATTT",4,26.29,8.57,-2.26,0.29,1.5,1,0.03,">1 nonsynonymous","T3E G9L D98S A105I",4
"lib2","SARS-CoV-2","TCTAAACACGGAGCCA",5,75.64,10.73,-0.1,0.05,2.91,1.1,0,"1 nonsynonymous","R27I",1
"lib2","SARS-CoV-2","TCTAAACATATCACCA",9,260.46,10.87,0.04,0.05,2.93,1.08,0,">1 nonsynonymous","A33W T201D",2
"lib2","SARS-CoV-2","TCTAAACCAATATATT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","A22T S41* G51* G74M L122P I142P L188P",7
"lib2","SARS-CoV-2","TCTAAACCACCTAATA",1,30.65,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","P7H G9R I28R F62N A81M",5
"lib2","SARS-CoV-2","TCTAAACCTAGTTAAA",2,28.16,6,-4.84,0.98,3,1.08,0.01,">1 nonsynonymous","G83V P149R F167Q",3
"lib2","SARS-CoV-2","TCTAAACCTTATAGAC",3,60.02,10.85,0.01,0.07,2.83,1.19,0,">1 nonsynonymous","R16N S129T",2
"lib2","SARS-CoV-2","TCTAAACGAAGTAAAA",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16L C150F",2
"lib2","SARS-CoV-2","TCTAAACGCCTCTAAA",1,11.48,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Q84I L95R G146C G152S N171E",5
"lib2","SARS-CoV-2","TCTAAACGGCAATCTT",6,58.09,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N64T R78M L122E D137Q E154L",5
"lib2","SARS-CoV-2","TCTAAACTCCGTGTTG",6,279.92,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K56L N157D Q176V",3
"lib2","SARS-CoV-2","TCTAAACTGACGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","I2C G83* A190F",3
"lib2","SARS-CoV-2","TCTAAACTTGTGACAA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7N S43* T55N A81R",4
"lib2","SARS-CoV-2","TCTAAAGGAACTTAAA",2,10.42,7.53,-3.31,0.54,1.5,1,0.07,">1 nonsynonymous","I28V Y165E",2
"lib2","SARS-CoV-2","TCTAAAGGCAACCCGT",1,37.45,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","G86C G172D",2
"lib2","SARS-CoV-2","TCTAAAGTTGGTTCGT",1,117.24,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I142R P177L P197F",3
"lib2","SARS-CoV-2","TCTAAATAAGGGAGGA",8,93.08,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R127S C150Y K199Q",3
"lib2","SARS-CoV-2","TCTAAATACGAAGGCA",3,32.87,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V20R N120Y A145V F160A",4
"lib2","SARS-CoV-2","TCTAAATAGCCAGCCA",5,24.43,8.41,-2.42,0.16,2.7,1.11,0.01,">1 nonsynonymous","A42S K56H N151Y N157T",4
"lib2","SARS-CoV-2","TCTAAATATGAATACC",4,0,NA,NA,NA,NA,NA,NA,"stop","A89T Y165*",2
"lib2","SARS-CoV-2","TCTAAATCCGCACCTG",8,33.25,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N107W S139F C158H",3
"lib2","SARS-CoV-2","TCTAAATCTCAGGCGA",7,145.34,10.27,-0.57,0.04,2.87,1.06,0,">1 nonsynonymous","F8V T201I",2
"lib2","SARS-CoV-2","TCTAAATGAAACTGTT",2,7.04,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","V37I S45T D68T D90E E141W",5
"lib2","SARS-CoV-2","TCTAAATGATCATTTC",1,22.14,9.77,-1.07,0.13,2.5,1.13,0.01,">1 nonsynonymous","C31L S41K S200T",3
"lib2","SARS-CoV-2","TCTAAATGCGGAATCA",2,54.27,10.04,-0.79,0.06,2.56,1.06,0,">1 nonsynonymous","N64P D98S N109L",3
"lib2","SARS-CoV-2","TCTAAATTTATTACTT",7,253.54,10.77,-0.07,0.03,2.91,1.1,0,">1 nonsynonymous","L60N H189N S200P",3
"lib2","SARS-CoV-2","TCTAACAAATCATAGC",5,0.8,NA,NA,NA,NA,NA,NA,"stop","R27* Y39R F99L F156V",4
"lib2","SARS-CoV-2","TCTAACAATCCTGCCG",5,41.52,10.81,-0.03,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAACAATGCATCTA",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3A N13S R127L",3
"lib2","SARS-CoV-2","TCTAACACAGAGGTGA",7,22.24,6,-4.84,2,1.5,1.37,0.06,">1 nonsynonymous","S53Y D68K W106R",3
"lib2","SARS-CoV-2","TCTAACACAGGACAGA",2,6.61,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","P7A K87E E135I C150P",4
"lib2","SARS-CoV-2","TCTAACAGACATGACA",5,26.61,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","L57E Y143P",2
"lib2","SARS-CoV-2","TCTAACAGGGTAGATA",12,11.19,NA,NA,NA,NA,NA,NA,"stop","Q84* P149V G172L",3
"lib2","SARS-CoV-2","TCTAACATCCACAAGG",2,27.66,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","D59P L131E",2
"lib2","SARS-CoV-2","TCTAACATGACCTTAA",9,0.97,NA,NA,NA,NA,NA,NA,"stop","E141F Q176*",2
"lib2","SARS-CoV-2","TCTAACATGTATTAAT",16,20.02,NA,NA,NA,NA,NA,NA,"stop","D97R Q163*",2
"lib2","SARS-CoV-2","TCTAACATTAATGTTG",4,7.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A81T T85E K114T E135C",4
"lib2","SARS-CoV-2","TCTAACATTTGACTTG",3,24.45,10.35,-0.48,0.1,2.85,1.19,0,"1 nonsynonymous","S147C",1
"lib2","SARS-CoV-2","TCTAACCAAGTATATG",6,19.65,9.93,-0.91,0.17,2.04,1.04,0.01,">1 nonsynonymous","A18T S45L P149S",3
"lib2","SARS-CoV-2","TCTAACCACTTTATAC",2,40.43,10.69,-0.15,0.04,2.94,1.07,0,">1 nonsynonymous","N4E L5I R73K",3
"lib2","SARS-CoV-2","TCTAACCATTTGCTCT",8,51.57,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F17T K48E P82F T100S P149S",5
"lib2","SARS-CoV-2","TCTAACCGAGGCCCCT",4,135.59,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G9C N64S Q84G P96R N107P Y119T E154I",7
"lib2","SARS-CoV-2","TCTAACCTACGAGGCG",1,50.44,NA,NA,NA,NA,NA,NA,"stop","C6I N13C N30V K56T P82L V103D D112*",7
"lib2","SARS-CoV-2","TCTAACCTCCCCACCA",3,0,NA,NA,NA,NA,NA,NA,"stop","S36* T46Y F99V A145T P161S",5
"lib2","SARS-CoV-2","TCTAACGAAAGGGCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L C158* S184F",3
"lib2","SARS-CoV-2","TCTAACGAGGCAACAT",3,0,NA,NA,NA,NA,NA,NA,"stop","D59G F134S P149* V173*",4
"lib2","SARS-CoV-2","TCTAACGATCTAAACC",6,22.25,9.37,-1.47,0.07,2.84,1.15,0,">1 nonsynonymous","S41D K114P",2
"lib2","SARS-CoV-2","TCTAACGCACACAATC",3,154.8,10.8,-0.04,0.04,2.94,1.05,0,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","TCTAACGGCTCCGAAC",3,77.66,10.83,-0.01,0.03,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAACGTGAACGATG",8,4.51,NA,NA,NA,NA,NA,NA,"stop","S45T T100S K114L L162S V180*",5
"lib2","SARS-CoV-2","TCTAACGTGTGAACCA",8,67.01,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F12D N64H S69L G83K I142K",5
"lib2","SARS-CoV-2","TCTAACTATGGTCGGA",1,0.1,NA,NA,NA,NA,NA,NA,"stop","A42* F62L S129N G174S",4
"lib2","SARS-CoV-2","TCTAACTCGGCGAAGA",5,91.22,9.86,-0.98,0.07,2.22,1.03,0,">1 nonsynonymous","F44V Y178I",2
"lib2","SARS-CoV-2","TCTAACTGAAAAGAAA",4,67,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9W Y35A G51H Y91C T100C A105S E135R",7
"lib2","SARS-CoV-2","TCTAACTGCCGCCGAA",4,47.29,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14L C61K F134P F167S",4
"lib2","SARS-CoV-2","TCTAACTTACGGCATA",6,59.78,10.14,-0.7,0.07,2.74,1,0,">1 nonsynonymous","E10V S43K A89T H189R",4
"lib2","SARS-CoV-2","TCTAACTTTGATGGCA",9,255.29,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","Y39S P177K",2
"lib2","SARS-CoV-2","TCTAAGAAAACCCGCA",5,127.32,9.84,-0.99,0.07,2.31,1.07,0,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","TCTAAGAAAATAAACT",3,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q A105D",2
"lib2","SARS-CoV-2","TCTAAGAATTGACCTT",2,15.41,10.3,-0.54,0.13,2.73,1.25,0.01,">1 nonsynonymous","N1Y N110T",2
"lib2","SARS-CoV-2","TCTAAGACAAACAAAA",5,84.62,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V11P Y93K T100H Y178V",4
"lib2","SARS-CoV-2","TCTAAGAGTCCGTAAA",9,33.92,6.48,-4.36,0.7,1.5,1.36,0.04,">1 nonsynonymous","C61G V103F S113T P133S",4
"lib2","SARS-CoV-2","TCTAAGCAAAACTGTA",4,24.37,10.77,-0.06,0.08,2.84,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAAGCAAGACTATA",2,11.78,8.14,-2.7,0.49,1.5,1,0.08,">1 nonsynonymous","E10F A14Y N40F",3
"lib2","SARS-CoV-2","TCTAAGCACTAGTAAA",9,92.19,10.75,-0.08,0.03,2.9,1.09,0,">1 nonsynonymous","K48R C61H D97L",3
"lib2","SARS-CoV-2","TCTAAGCATTACACTC",5,70.72,9.96,-0.87,0.06,2.7,1.1,0,">1 nonsynonymous","N107S G196L T201S",3
"lib2","SARS-CoV-2","TCTAAGCCACTGAAAG",2,73.9,10.67,-0.16,0.03,2.93,1.07,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","TCTAAGCGATAAAACA",3,6.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15F T100L P149F Y165L",4
"lib2","SARS-CoV-2","TCTAAGCTAACTCTGA",6,16.25,9.49,-1.35,0.39,1.5,1.04,0.08,">1 nonsynonymous","L5P V103K F160P",3
"lib2","SARS-CoV-2","TCTAAGCTGCCATTCC",3,2.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50T F62C",2
"lib2","SARS-CoV-2","TCTAAGGAAATCATAG",3,32.65,6,-4.84,2,3,1.2,0.02,">1 nonsynonymous","N4F K94N Y175V",3
"lib2","SARS-CoV-2","TCTAAGGGTTGGCTCG",2,9.23,10.17,-0.67,0.06,2.9,1,0,"1 nonsynonymous","S139F",1
"lib2","SARS-CoV-2","TCTAAGGTATCATGTA",5,52.5,10.82,-0.02,0.05,2.91,1.12,0,">1 nonsynonymous","R27V V37L I138L T201P",4
"lib2","SARS-CoV-2","TCTAAGTAAAACGCAT",3,73.21,10.84,0.01,0.05,2.94,1.07,0,"1 nonsynonymous","I2D",1
"lib2","SARS-CoV-2","TCTAAGTATCATCATT",2,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42G L95M G166T",3
"lib2","SARS-CoV-2","TCTAAGTCTACGTAGT",9,151.95,9.9,-0.94,0.08,2.19,1.04,0,">1 nonsynonymous","S41R I80V D98K A190V",4
"lib2","SARS-CoV-2","TCTAAGTCTTTAGACT",4,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42I T55V D137K",3
"lib2","SARS-CoV-2","TCTAATAAAAGGGTGG",4,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K I80G D97S C102K P149Y G166K",6
"lib2","SARS-CoV-2","TCTAATAACACCTTCT",16,250.39,10.88,0.04,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAATAACACGAGCA",7,63.7,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C49M N107I L125D A145S S164H Y178I E186N",7
"lib2","SARS-CoV-2","TCTAATAACCAAATCT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10K F47* D59N T201L",4
"lib2","SARS-CoV-2","TCTAATAACCAACTTC",1,12.96,8.36,-2.47,0.29,1.5,1,0.06,">1 nonsynonymous","L60A D90F A105K Y165M T201R",5
"lib2","SARS-CoV-2","TCTAATAACGCCACAA",1,21.06,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4L L60R K94S E141G",4
"lib2","SARS-CoV-2","TCTAATAACTCGTCGA",3,65.48,9.17,-1.67,0.1,1.79,1.08,0,">1 nonsynonymous","P7S K56G A81V T100A",4
"lib2","SARS-CoV-2","TCTAATAAGATAACCC",9,113.95,10.82,-0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAATAAGCCACCAT",10,97.63,9.75,-1.08,0.06,2.13,1.1,0,"1 nonsynonymous","V11D",1
"lib2","SARS-CoV-2","TCTAATAAGTCCATTG",1,15.81,NA,NA,NA,NA,NA,NA,"stop","I28Q D34N V71*",3
"lib2","SARS-CoV-2","TCTAATAAGTTGTTTG",6,1.12,NA,NA,NA,NA,NA,NA,"stop","T3M S19L G83T L95P G101S G116T P133Y V153*",8
"lib2","SARS-CoV-2","TCTAATACAACGACAA",6,0.55,NA,NA,NA,NA,NA,NA,"stop","F62* D98T",2
"lib2","SARS-CoV-2","TCTAATACAGGGCGCA",3,18.63,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G51S F99H S129L Q144C",4
"lib2","SARS-CoV-2","TCTAATACATAAGCTG",2,43.34,8.18,-2.65,0.11,1.66,1.04,0,">1 nonsynonymous","S139L G146R",2
"lib2","SARS-CoV-2","TCTAATACCCAAACCT",4,0.15,NA,NA,NA,NA,NA,NA,"stop","T3E N92* D97F R127F S139N T201N",6
"lib2","SARS-CoV-2","TCTAATACGAGGCAAA",1,9.63,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","K26W V37L V71L D98L",4
"lib2","SARS-CoV-2","TCTAATACGCCTTATA",1,22.3,10.47,-0.36,0.08,3,1.02,0,"1 nonsynonymous","D98L",1
"lib2","SARS-CoV-2","TCTAATACTGGGTACA",14,1.8,NA,NA,NA,NA,NA,NA,"stop","I28G N64I R73T Y119F S129M T140*",6
"lib2","SARS-CoV-2","TCTAATAGCTAAAAAA",5,33.39,9.84,-1,0.11,2.49,1.02,0,">1 nonsynonymous","N1F C61L T85C",3
"lib2","SARS-CoV-2","TCTAATATAACGCGCG",1,9.16,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","Y35M P96R V103F",3
"lib2","SARS-CoV-2","TCTAATATATTCAGTC",10,194.5,8.54,-2.3,0.08,2.49,1.08,0,">1 nonsynonymous","Y119A Q144V N151L",3
"lib2","SARS-CoV-2","TCTAATATCGTGGAAA",10,96.09,10.8,-0.04,0.06,2.86,1.09,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","TCTAATATTAAGAACC",1,10.88,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","N1T S36P A67P W106V N151C",5
"lib2","SARS-CoV-2","TCTAATATTCAAAGAT",12,154.67,10.63,-0.21,0.03,2.91,1.08,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","TCTAATCAATTCTTGT",1,67.72,8,-2.84,0.1,2.46,1.05,0,"1 nonsynonymous","C158R",1
"lib2","SARS-CoV-2","TCTAATCATATGACGT",6,15.82,6.84,-4,0.58,1.5,1.09,0.06,">1 nonsynonymous","A42R D68A C150Y",3
"lib2","SARS-CoV-2","TCTAATCCAGAACTCT",10,32.84,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V77P I88V",2
"lib2","SARS-CoV-2","TCTAATCCTACTCTCC",2,72.85,9.91,-0.93,0.12,2.18,1.1,0,">1 nonsynonymous","V37R T85F K94A F134G",4
"lib2","SARS-CoV-2","TCTAATCGACAGCCTA",1,11.85,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86F W106Q",2
"lib2","SARS-CoV-2","TCTAATCGATCCTGTT",5,78.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10D D112R",2
"lib2","SARS-CoV-2","TCTAATCGTTCCATGC",1,6.77,10.37,-0.47,0.26,2.77,1.2,0.01,">1 nonsynonymous","A33S T100L A105S",3
"lib2","SARS-CoV-2","TCTAATCTCATTACGA",7,3.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y G83R N92Y",3
"lib2","SARS-CoV-2","TCTAATCTGATAAGTA",8,124.96,10.86,0.03,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAATGAGAGCTGTA",16,137.02,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D90R F99G R179C",3
"lib2","SARS-CoV-2","TCTAATGCTAAAAAAC",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45H K56I Y119E",3
"lib2","SARS-CoV-2","TCTAATGTACTTACAA",7,124.58,10.18,-0.66,0.04,2.86,1.03,0,"1 nonsynonymous","I28A",1
"lib2","SARS-CoV-2","TCTAATGTCAACAAAG",1,11.02,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","V11R Y50I",2
"lib2","SARS-CoV-2","TCTAATGTCGAACACT",6,38.74,6,-4.84,1.86,1.5,1.25,0.03,">1 nonsynonymous","I88S N151Y",2
"lib2","SARS-CoV-2","TCTAATGTTATGGCAA",6,81.52,9.93,-0.91,0.05,2.89,1.05,0,"1 nonsynonymous","N118V",1
"lib2","SARS-CoV-2","TCTAATGTTCCTGTAT",1,0.91,NA,NA,NA,NA,NA,NA,"stop","C150R F167S S184*",3
"lib2","SARS-CoV-2","TCTAATTAAAACCCTA",20,119.31,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I2S C31G W106L N118L K128P E141K",6
"lib2","SARS-CoV-2","TCTAATTTCCCTCTAA",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P D68M S108K",3
"lib2","SARS-CoV-2","TCTAATTTGAGATGCA",17,47.27,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V37Y R73S W106S F156N T170I",5
"lib2","SARS-CoV-2","TCTAATTTGTAATGAA",6,24.23,8.47,-2.36,0.27,1.5,1.04,0.03,">1 nonsynonymous","D34N S45E A81C R136S",4
"lib2","SARS-CoV-2","TCTACAAAAACTTAAA",2,25.38,9.63,-1.2,0.09,1.98,1,0,">1 nonsynonymous","D59W Q84Y E141S",3
"lib2","SARS-CoV-2","TCTACAAAACATCGCC",7,111.05,10.26,-0.58,0.05,2.82,1.09,0,">1 nonsynonymous","A81E P169R",2
"lib2","SARS-CoV-2","TCTACAAACTTGTTAC",4,0.81,NA,NA,NA,NA,NA,NA,"stop","N120M E154*",2
"lib2","SARS-CoV-2","TCTACAAAGAACCATG",5,39.39,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F8S V52Y N107R S164R V180M",5
"lib2","SARS-CoV-2","TCTACAACGGGCTTCA",4,30.16,10.88,0.04,0.07,2.93,1.08,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","TCTACAAGAGAGCTCT",5,2.41,NA,NA,NA,NA,NA,NA,"stop","F8L A67N K87* N118* F134L",5
"lib2","SARS-CoV-2","TCTACAAGGCATGCAG",11,40.95,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A18T Y93W",2
"lib2","SARS-CoV-2","TCTACAAGTTAGACCT",1,18.37,6.09,-4.75,0.42,2.87,1.13,0.01,">1 nonsynonymous","A18T S113R P133Y",3
"lib2","SARS-CoV-2","TCTACAATATAATATC",13,182.51,10.82,-0.02,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTACAATCCAGTTGA",7,88.73,9.97,-0.87,0.07,2.49,1.03,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","TCTACACAACAAGGGC",14,218.63,9.54,-1.3,0.06,1.98,1.06,0,">1 nonsynonymous","L38Q S43W",2
"lib2","SARS-CoV-2","TCTACACAAGGTTGAG",15,139.93,10.27,-0.57,0.04,2.73,1.02,0,">1 nonsynonymous","A14L P54R",2
"lib2","SARS-CoV-2","TCTACACAGATTGAAG",8,0.2,NA,NA,NA,NA,NA,NA,"stop","C61R P96*",2
"lib2","SARS-CoV-2","TCTACACCCAAGGGAG",3,39.01,9.75,-1.09,0.07,2.35,1.06,0,">1 nonsynonymous","F8P N120D",2
"lib2","SARS-CoV-2","TCTACACCTAAAAGTT",4,23.67,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A14I Y93P N171S",3
"lib2","SARS-CoV-2","TCTACACGTGAAAATA",6,109.13,9.76,-1.07,0.05,2.82,1.07,0,"1 nonsynonymous","P161G",1
"lib2","SARS-CoV-2","TCTACACTCACGCTGA",13,67.98,7.88,-2.95,0.27,1.5,1.05,0.03,">1 nonsynonymous","A14K C49S",2
"lib2","SARS-CoV-2","TCTACACTGCGGTCTG",2,5.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63K P96W A105V",3
"lib2","SARS-CoV-2","TCTACAGACGCTTGAT",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCTACAGAGATGTTAT",1,19.5,10.78,-0.06,0.08,3,1.03,0,"1 nonsynonymous","S129T",1
"lib2","SARS-CoV-2","TCTACAGCATTTGAGA",9,87.72,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","K26P G83M R136M T201P",4
"lib2","SARS-CoV-2","TCTACAGCTACACTAC",2,64.67,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y39C T85Y D98H S129A C150F",5
"lib2","SARS-CoV-2","TCTACAGGTGATTACG",5,6.41,6,-4.84,2,3,1.21,0.02,">1 nonsynonymous","D75V N107Y L125N",3
"lib2","SARS-CoV-2","TCTACAGTATTGCAAT",8,70.73,10.43,-0.41,0.05,2.86,1.07,0,">1 nonsynonymous","K56Y R78S S164Y",3
"lib2","SARS-CoV-2","TCTACATATATTCTGG",1,32.96,10.67,-0.16,0.06,2.95,1.05,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","TCTACATATGAACCTT",7,111.73,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55M A89H R127I I142S",4
"lib2","SARS-CoV-2","TCTACATCATGTGTCC",1,89.65,9.23,-1.61,0.07,2.67,1.11,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TCTACATCTGTGAATA",2,18.32,9.95,-0.89,0.06,2.97,1.05,0,">1 nonsynonymous","K87E K198M",2
"lib2","SARS-CoV-2","TCTACATTAAAACGAT",8,60.58,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V20M S36N P149H Q168V",4
"lib2","SARS-CoV-2","TCTACATTTCTAGCAT",4,44.93,8.81,-2.02,0.07,2.64,1.14,0,">1 nonsynonymous","V37G D97Y A145F",3
"lib2","SARS-CoV-2","TCTACCAAAGCCATTT",10,126.78,8.27,-2.57,0.1,2.01,1.14,0,">1 nonsynonymous","T100Y S113L P149H",3
"lib2","SARS-CoV-2","TCTACCAAGCCGTGGC",5,55.83,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V52M E76R",2
"lib2","SARS-CoV-2","TCTACCAATTTTATAA",3,57.92,10.83,-0.01,0.09,2.92,1.1,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","TCTACCACATAAACCA",10,4.03,NA,NA,NA,NA,NA,NA,"stop","R16T C31S C61W G83I N107M Q176*",6
"lib2","SARS-CoV-2","TCTACCACTATACATG",7,149.74,10.81,-0.03,0.03,2.95,1.07,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","TCTACCACTTCTACAT",2,20.01,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I28R V77K L95S G101S Y165S T170C",6
"lib2","SARS-CoV-2","TCTACCAGAGAATCGA",5,0.38,NA,NA,NA,NA,NA,NA,"stop","N58S A67G G116* I138R V153R",5
"lib2","SARS-CoV-2","TCTACCAGCCAATGAC",15,216.22,10.37,-0.47,0.03,2.9,1.07,0,">1 nonsynonymous","F44I L60V",2
"lib2","SARS-CoV-2","TCTACCATAGAAATGT",4,66.89,10.87,0.03,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTACCATTCCGGTCG",4,55.98,10.2,-0.64,0.07,2.96,1.06,0,">1 nonsynonymous","Y35P I142L",2
"lib2","SARS-CoV-2","TCTACCCAAAACTATC",4,73.52,10.88,0.05,0.04,2.86,1.11,0,">1 nonsynonymous","R16V V37Q A42L T201L",4
"lib2","SARS-CoV-2","TCTACCCAACGCTTTA",5,45.98,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","S19V G83Y G101R S139T P197T",5
"lib2","SARS-CoV-2","TCTACCCCACAAAAGT",2,32.27,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C49D T63S S113K P169H",4
"lib2","SARS-CoV-2","TCTACCCGTCCCCCCC",2,22.25,10.84,0,0.05,2.96,1.05,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","TCTACCCTGACACAAA",2,143.36,10.62,-0.22,0.03,2.94,1.06,0,">1 nonsynonymous","A33L D98S",2
"lib2","SARS-CoV-2","TCTACCCTTAAAGATG",3,74.34,9.31,-1.53,0.06,2.8,1.1,0,">1 nonsynonymous","K114S I142S",2
"lib2","SARS-CoV-2","TCTACCCTTCCAAAGG",9,131.96,10.34,-0.5,0.03,2.83,1.09,0,">1 nonsynonymous","A14N A42S",2
"lib2","SARS-CoV-2","TCTACCGAATGCAGCA",10,56.28,9.13,-1.71,0.06,2.91,1.05,0,">1 nonsynonymous","N58D G117L T148S",3
"lib2","SARS-CoV-2","TCTACCGACCATCTGA",1,25.13,9.5,-1.33,0.12,2.02,1.09,0.01,">1 nonsynonymous","T3I I104W Q144W",3
"lib2","SARS-CoV-2","TCTACCGGAGCTAACC",2,10.25,10.44,-0.39,0.12,2.92,1.09,0,">1 nonsynonymous","E186Y P191R",2
"lib2","SARS-CoV-2","TCTACCGTACTAAGTA",4,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A42N F99I",3
"lib2","SARS-CoV-2","TCTACCTCGAAAGTAA",21,0.69,NA,NA,NA,NA,NA,NA,"stop","Y21R V32L V37*",3
"lib2","SARS-CoV-2","TCTACCTGTCATTAGT",1,2.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F G9T F62W A89S P133L T170L",6
"lib2","SARS-CoV-2","TCTACCTTAGCACTTT",2,39.99,9.02,-1.82,0.12,1.65,1.1,0.01,">1 nonsynonymous","R16K Y35P G51V N120E",4
"lib2","SARS-CoV-2","TCTACCTTTAGTACAA",21,1609.05,10.77,-0.06,0.03,2.99,1.03,0,">1 nonsynonymous","G83R T201A",2
"lib2","SARS-CoV-2","TCTACGAACAACGACA",6,68.39,9.82,-1.02,0.05,1.95,1.03,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","TCTACGACAATCGATT",4,57.36,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N92L P149M",2
"lib2","SARS-CoV-2","TCTACGAGGACCGCCA",8,31.75,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","T3L A14G G51S Y93A L125Q",5
"lib2","SARS-CoV-2","TCTACGATAACGAGAG",2,28.03,8.94,-1.9,0.18,1.5,1.18,0.02,">1 nonsynonymous","A33W F44R V77A",3
"lib2","SARS-CoV-2","TCTACGATGCCTATAT",3,126.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5M T85A C158V",3
"lib2","SARS-CoV-2","TCTACGCATAGGACAA",13,170.12,10.17,-0.67,0.07,2.67,1.01,0,">1 nonsynonymous","L5G Y165F",2
"lib2","SARS-CoV-2","TCTACGCTGCTGATCA",8,21.33,8.89,-1.95,0.3,1.5,1.02,0.04,">1 nonsynonymous","N1Y E10D A42S N92A",4
"lib2","SARS-CoV-2","TCTACGGAGGCTGAGT",4,42.21,10.83,-0.01,0.07,2.95,1.04,0,"1 nonsynonymous","L122C",1
"lib2","SARS-CoV-2","TCTACGGCATACTAAA",6,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R W106E L183P T201N",4
"lib2","SARS-CoV-2","TCTACGGTTATCTCTC",16,155.91,6,-4.84,2,1.5,1.26,0.02,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TCTACGTATACTACGG",1,0.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81R F126L E135R",3
"lib2","SARS-CoV-2","TCTACTAATTTCTAGA",8,68.75,10.02,-0.82,0.08,2.43,1.09,0,">1 nonsynonymous","V37C S139L",2
"lib2","SARS-CoV-2","TCTACTACAAAAAGGC",14,105.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I72G S113D Y121E",3
"lib2","SARS-CoV-2","TCTACTACCCATATAA",8,0.58,NA,NA,NA,NA,NA,NA,"stop","A42I F167*",2
"lib2","SARS-CoV-2","TCTACTAGGAATACCA",5,142.75,10.26,-0.58,0.03,2.9,1.02,0,"1 nonsynonymous","A105W",1
"lib2","SARS-CoV-2","TCTACTCAAGAGTAAC",7,29.95,6,-4.84,1.02,1.5,1.07,0,">1 nonsynonymous","L5D V77G A89S C150Y F156W",5
"lib2","SARS-CoV-2","TCTACTCACGACGAAC",4,11.75,8.65,-2.19,0.2,1.73,1.11,0.02,">1 nonsynonymous","A22N P96R A105S G146S",4
"lib2","SARS-CoV-2","TCTACTCCAGATAAAC",9,119.52,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","A89Q P96Q E154S F167L Q176S S184F",6
"lib2","SARS-CoV-2","TCTACTCGAAAGGTCT",3,61.4,10.63,-0.2,0.04,2.91,1.01,0,">1 nonsynonymous","F44G T140E",2
"lib2","SARS-CoV-2","TCTACTCTAGCCATTG",1,5.4,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","R124I N130H",2
"lib2","SARS-CoV-2","TCTACTGAAAACCTGG",5,115.04,9.58,-1.26,0.05,1.81,1.08,0,">1 nonsynonymous","A22R N30R A81T",3
"lib2","SARS-CoV-2","TCTACTGAAATACCCG",9,0.58,NA,NA,NA,NA,NA,NA,"stop","D34V D90A D97* A105L K128D G172V V182H L188K",8
"lib2","SARS-CoV-2","TCTACTGAATGGAGAT",3,57.47,9.25,-1.59,0.08,2.56,1.04,0,">1 nonsynonymous","T3F L122I G146T S200N",4
"lib2","SARS-CoV-2","TCTACTGATCAACAAC",2,76.84,10.67,-0.17,0.05,3,1,0,">1 nonsynonymous","A33G E141S S200F",3
"lib2","SARS-CoV-2","TCTACTGTGCCATCAC",9,103.61,10.72,-0.11,0.06,2.97,1.05,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","TCTACTTAATTACTCA",1,3.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90R",1
"lib2","SARS-CoV-2","TCTACTTCAACTTCAT",5,33.94,6.01,-4.83,1.8,1.5,1.2,0.03,">1 nonsynonymous","D112Y L131S T140L",3
"lib2","SARS-CoV-2","TCTACTTCTCGAATCC",2,21.52,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14G I104A G116C K132T",4
"lib2","SARS-CoV-2","TCTACTTTTCACAACG",7,3.24,NA,NA,NA,NA,NA,NA,"stop","C31* N58F Y91P V103G N120S",5
"lib2","SARS-CoV-2","TCTAGAAAAGCTGGCA",3,32.88,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D59W A89F Y123L Y143L",4
"lib2","SARS-CoV-2","TCTAGAAATAGAAAGC",6,67.3,10.84,0.01,0.06,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAGAAATTTAATAT",12,98.21,6,-4.84,2,3,1.23,0,">1 nonsynonymous","N24T C49S T55S R73D G86N W106S N151D",7
"lib2","SARS-CoV-2","TCTAGAACACTGGATT",3,21.21,9.9,-0.93,0.18,2.43,1.09,0.01,">1 nonsynonymous","C61Y V71L",2
"lib2","SARS-CoV-2","TCTAGAACATATGAAA",1,15.52,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","A14G V77S",2
"lib2","SARS-CoV-2","TCTAGAACGATGTGGA",12,63.39,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A89D P96H D112L P197W",4
"lib2","SARS-CoV-2","TCTAGAATATGAACAC",1,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C S69E K87F",3
"lib2","SARS-CoV-2","TCTAGAATTATATCAC",1,0,NA,NA,NA,NA,NA,NA,"stop","D97L P161*",2
"lib2","SARS-CoV-2","TCTAGACAATGAAAGT",1,16.77,10.02,-0.82,0.12,2.6,1,0.01,">1 nonsynonymous","F44K E135G",2
"lib2","SARS-CoV-2","TCTAGACGGGTGTGCA",8,28,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","N1G L95E V173M",3
"lib2","SARS-CoV-2","TCTAGACGTAGGGAAT",6,123.97,9.62,-1.21,0.08,2.15,1.02,0,">1 nonsynonymous","P133H F160I",2
"lib2","SARS-CoV-2","TCTAGAGACAACTTTG",7,98.54,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N92E A145I",2
"lib2","SARS-CoV-2","TCTAGATAAGCCAAAT",1,23.6,6,-4.84,2,3,1.05,0,">1 nonsynonymous","G86S V153H F167V Q176F",4
"lib2","SARS-CoV-2","TCTAGATAATAAATAC",1,0.05,NA,NA,NA,NA,NA,NA,"stop","L122S K198*",2
"lib2","SARS-CoV-2","TCTAGATATCTGGTAC",6,31.5,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","K26C R73C W106H",3
"lib2","SARS-CoV-2","TCTAGATTAAACCACG",6,1.98,NA,NA,NA,NA,NA,NA,"stop","S41* F47I K87R A145Y",4
"lib2","SARS-CoV-2","TCTAGATTAAGGAGTA",3,51.26,9.43,-1.4,0.14,1.77,1.19,0.01,">1 nonsynonymous","I88V W106S",2
"lib2","SARS-CoV-2","TCTAGATTCGTTCTAA",5,168.08,10.78,-0.05,0.04,2.96,1.06,0,"1 nonsynonymous","D59H",1
"lib2","SARS-CoV-2","TCTAGATTGCGCAGAA",7,48.66,10.84,0,0.06,3,1.03,0,"1 nonsynonymous","V32Q",1
"lib2","SARS-CoV-2","TCTAGATTTAGTCCAA",3,25.69,10.79,-0.04,0.1,2.85,1.17,0,"1 nonsynonymous","S36M",1
"lib2","SARS-CoV-2","TCTAGCAACCCTACAC",6,59.83,10.38,-0.45,0.06,2.93,1,0,"1 nonsynonymous","R127A",1
"lib2","SARS-CoV-2","TCTAGCACAAACAACG",24,260.4,8.92,-1.92,0.17,1.5,1.01,0.01,">1 nonsynonymous","K48M K94V N120R",3
"lib2","SARS-CoV-2","TCTAGCAGCTTGTCCT",4,77.62,9.28,-1.55,0.18,1.5,1.05,0.01,">1 nonsynonymous","S43T L60S W106C",3
"lib2","SARS-CoV-2","TCTAGCAGTGCCGTTT",17,548.31,10.8,-0.04,0.04,2.96,1.06,0,">1 nonsynonymous","P54H T201N",2
"lib2","SARS-CoV-2","TCTAGCATAATTAAAA",3,34.48,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3L D90I P169I",3
"lib2","SARS-CoV-2","TCTAGCATTAAAATTT",2,89.93,9.53,-1.3,0.07,2.69,1.08,0,">1 nonsynonymous","N1P F12L A33P K128R G174Q",5
"lib2","SARS-CoV-2","TCTAGCCCGAACAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","TCTAGCCGCAGTGAGG",2,43.07,10.88,0.04,0.06,2.92,1.07,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","TCTAGCCTAAATCCGA",2,43.32,10.09,-0.74,0.09,2.79,1,0,">1 nonsynonymous","A14H Y91F Q144A",3
"lib2","SARS-CoV-2","TCTAGCCTCCCGACGG",4,12.63,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","P82Q D98A N118F R179W",4
"lib2","SARS-CoV-2","TCTAGCGAAGGAGGCC",10,194.75,10.84,0,0.06,2.79,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAGCGTAAGAGTTA",4,16.65,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F47D Y50S D97T R124K A192E",5
"lib2","SARS-CoV-2","TCTAGCTAGATTAAAC",5,0.28,NA,NA,NA,NA,NA,NA,"stop","S41C G83L Y93S T100* Q144C",5
"lib2","SARS-CoV-2","TCTAGCTCCAACATAT",4,24.92,10.65,-0.19,0.07,2.88,1.1,0,">1 nonsynonymous","Y39L D98N Y178S",3
"lib2","SARS-CoV-2","TCTAGGAAAACAGTGG",1,10.3,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L60V A89M S147W G174W",4
"lib2","SARS-CoV-2","TCTAGGAAATTGTTCG",4,22.48,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","L5W G86I G172T S184D",4
"lib2","SARS-CoV-2","TCTAGGAAGTTACTGT",7,69.15,10.65,-0.18,0.04,2.99,1.02,0,">1 nonsynonymous","F62V F185L",2
"lib2","SARS-CoV-2","TCTAGGAATGCTCACA",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10R D68L E135L L162R",4
"lib2","SARS-CoV-2","TCTAGGACCTTCTATT",1,23.42,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","L60S F99D G117T A145L",4
"lib2","SARS-CoV-2","TCTAGGAGCACGGTCT",5,1.68,NA,NA,NA,NA,NA,NA,"stop","T3D R25L K48* D75R",4
"lib2","SARS-CoV-2","TCTAGGATTTTCTCAA",6,140.33,10.29,-0.55,0.04,2.84,1.04,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TCTAGGCGCATTACAA",1,24.49,9.28,-1.56,0.16,2.23,1.05,0.01,">1 nonsynonymous","C6F F134E A190S",3
"lib2","SARS-CoV-2","TCTAGGCTAACGCTAA",5,0.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S N157K",2
"lib2","SARS-CoV-2","TCTAGGCTAATCGTTG",1,16.92,10.18,-0.65,0.11,2.09,1.05,0,">1 nonsynonymous","N13F C61L D98E",3
"lib2","SARS-CoV-2","TCTAGGTCTTGGATAT",4,88.76,9.62,-1.21,0.09,1.88,1.08,0,">1 nonsynonymous","N64F A105F",2
"lib2","SARS-CoV-2","TCTAGGTTCAAATCTT",5,56.57,10.77,-0.07,0.04,2.99,1.05,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","TCTAGGTTGACGGTAT",3,36.98,7.11,-3.73,0.4,1.5,1.1,0.05,">1 nonsynonymous","C49H S53F A81I D137R F156H",5
"lib2","SARS-CoV-2","TCTAGGTTTAGAAGAA",2,6.99,9.4,-1.43,0.11,3,1.03,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","TCTAGTAAAAAGAAAA",10,65.81,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F8H Y91N V103C P133Y S200I",5
"lib2","SARS-CoV-2","TCTAGTAATTTCTCAT",9,69.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9C F44I A67D D97E E141T E154F Y165C",7
"lib2","SARS-CoV-2","TCTAGTACATACTACA",4,38.86,10.8,-0.03,0.04,2.94,1.06,0,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","TCTAGTACATACTAGC",2,8.99,10.03,-0.81,0.16,2.86,1.12,0.01,">1 nonsynonymous","L122E N171C",2
"lib2","SARS-CoV-2","TCTAGTATAACTTGCT",2,29.77,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T85M L95K N120L",3
"lib2","SARS-CoV-2","TCTAGTATCAACTCTT",10,56.23,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G83R A105L G152M V181H K199I",5
"lib2","SARS-CoV-2","TCTAGTCAAAACACAC",2,37.87,10.61,-0.23,0.06,2.8,1.1,0,">1 nonsynonymous","A42F S129M",2
"lib2","SARS-CoV-2","TCTAGTCACGATGGAC",13,1.3,NA,NA,NA,NA,NA,NA,"stop","N64* G117*",2
"lib2","SARS-CoV-2","TCTAGTCATAAAGACT",5,81.19,10.79,-0.05,0.04,2.95,1.06,0,"1 nonsynonymous","F62I",1
"lib2","SARS-CoV-2","TCTAGTCTATGTAAGG",8,146.36,10.12,-0.72,0.06,2.47,1.05,0,">1 nonsynonymous","I2D D90G V115R",3
"lib2","SARS-CoV-2","TCTAGTGAAACAAGAT",11,133.01,10.87,0.03,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTAGTGAAATGTTAT",3,5.2,7.81,-3.02,0.16,2.96,1.01,0,">1 nonsynonymous","A33S F47K N120L V180C",4
"lib2","SARS-CoV-2","TCTAGTGAAGTACGCG",4,59.77,10.02,-0.82,0.06,2.86,1.11,0,">1 nonsynonymous","P54I T63G E154C S200T",4
"lib2","SARS-CoV-2","TCTAGTGGTAGTGTTG",6,31.93,8.96,-1.88,0.14,2.15,1.11,0.01,">1 nonsynonymous","Y50C T201L",2
"lib2","SARS-CoV-2","TCTAGTGGTTTTTTTA",9,160.67,10.58,-0.26,0.03,2.89,1.08,0,">1 nonsynonymous","R27A N40T",2
"lib2","SARS-CoV-2","TCTAGTGTCCAGTAAG",2,28.84,8.6,-2.23,0.16,2.99,1.01,0.01,">1 nonsynonymous","Y91L Y175N",2
"lib2","SARS-CoV-2","TCTAGTTACACAGAAG",3,99.31,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V32A A89G Y121W I142N",4
"lib2","SARS-CoV-2","TCTAGTTACCATTCCT",4,14.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48Y K94T L183C",3
"lib2","SARS-CoV-2","TCTAGTTGATGAATAG",6,67.03,10.36,-0.48,0.04,2.91,1.06,0,"1 nonsynonymous","Y91H",1
"lib2","SARS-CoV-2","TCTATAAAACTCAACC",8,45.03,6.29,-4.55,0.9,1.5,1.1,0.04,">1 nonsynonymous","L95Q G116E",2
"lib2","SARS-CoV-2","TCTATAAAAGGCCACT",5,21.4,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","V20P I88A G101D",3
"lib2","SARS-CoV-2","TCTATAAACAACGCCC",9,154.93,10.59,-0.25,0.03,2.97,1.04,0,"1 nonsynonymous","N151I",1
"lib2","SARS-CoV-2","TCTATAAACAGCGAAC",9,323.39,9.47,-1.36,0.04,2.92,1.06,0,">1 nonsynonymous","N1K I104W Y119A",3
"lib2","SARS-CoV-2","TCTATAAATCCAAGCA",2,3.33,NA,NA,NA,NA,NA,NA,"stop","G74* I104M",2
"lib2","SARS-CoV-2","TCTATAACACACATGG",4,10.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99C S200V",2
"lib2","SARS-CoV-2","TCTATAACCCCACGAT",4,92.35,9.89,-0.95,0.06,2.21,1.03,0,">1 nonsynonymous","F8S R27K",2
"lib2","SARS-CoV-2","TCTATAACGACATGCG",1,7.35,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12Y T55D D90C S129Y Q144S",5
"lib2","SARS-CoV-2","TCTATAAGATATATTT",11,63.82,6,-4.84,2,3,1.13,0,">1 nonsynonymous","V11K C61R F134L V180F",4
"lib2","SARS-CoV-2","TCTATAATATATAAGC",3,21.84,10.71,-0.13,0.05,3,1.01,0,"1 nonsynonymous","N58C",1
"lib2","SARS-CoV-2","TCTATAATCAGGTAAC",7,0.85,NA,NA,NA,NA,NA,NA,"stop","P54T K198*",2
"lib2","SARS-CoV-2","TCTATAATGGCAAACA",7,75.43,6,-4.84,2,3,1.23,0.01,"1 nonsynonymous","G101P",1
"lib2","SARS-CoV-2","TCTATACAAAACGCAG",1,68.64,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9S G86W E141S G146V C150R",5
"lib2","SARS-CoV-2","TCTATACAATTCAGCA",6,28.91,6,-4.84,2,3,1.09,0,">1 nonsynonymous","L60P L162T V180E",3
"lib2","SARS-CoV-2","TCTATACAATTCATAT",1,7.83,7.56,-3.27,0.18,1.5,1.01,0.01,">1 nonsynonymous","A22V Y123T T140Y H189D",4
"lib2","SARS-CoV-2","TCTATACAGGTTTACC",5,78.1,10.72,-0.11,0.05,3,1.03,0,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","TCTATACATTACACGT",5,57.23,9,-1.84,0.16,1.99,1.17,0.01,">1 nonsynonymous","V37A Y121E F160W",3
"lib2","SARS-CoV-2","TCTATACCAGGTGAGG",2,10.2,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","A42T N64Y R124P",3
"lib2","SARS-CoV-2","TCTATACCTGAAATCT",16,152.05,10.52,-0.32,0.04,2.89,1.04,0,">1 nonsynonymous","T3L D90M",2
"lib2","SARS-CoV-2","TCTATACGTATACCTG",2,69.1,10.25,-0.58,0.07,2.77,1.08,0,">1 nonsynonymous","K56T E141M P149Y",3
"lib2","SARS-CoV-2","TCTATACTAACATGAT",7,37.8,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","A14G F167R",2
"lib2","SARS-CoV-2","TCTATACTGTCTGGCA",2,122.57,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V37C C61N V115I R124L F185L",5
"lib2","SARS-CoV-2","TCTATAGGTATGGTTA",6,64.49,10.14,-0.7,0.05,2.81,1.05,0,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","TCTATAGTAAGAAAAA",4,80.37,10.62,-0.22,0.03,2.9,1.09,0,">1 nonsynonymous","G9E V37P Y121L K132R L187S",5
"lib2","SARS-CoV-2","TCTATAGTTCAGATTA",5,56.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N4L K94Y L111P L125S",4
"lib2","SARS-CoV-2","TCTATAGTTTGATGCA",13,85.34,8.02,-2.82,0.37,1.5,1.01,0.05,">1 nonsynonymous","W23P A105V",2
"lib2","SARS-CoV-2","TCTATATAGAGTGATT",4,0.62,NA,NA,NA,NA,NA,NA,"stop","C6W A14* D90H",3
"lib2","SARS-CoV-2","TCTATATAGGCAAAAA",2,12.7,9.91,-0.92,0.08,2.63,1.13,0,">1 nonsynonymous","R27H I88V N120L",3
"lib2","SARS-CoV-2","TCTATATATTTTTGTT",6,2.32,NA,NA,NA,NA,NA,NA,"stop","T3K S53P D75* Q79R Y165L Y178T",6
"lib2","SARS-CoV-2","TCTATATCATTAACGA",1,1.4,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TCTATATCGAACCAAC",3,57.72,10.51,-0.33,0.06,2.94,1.05,0,">1 nonsynonymous","F8M L60V",2
"lib2","SARS-CoV-2","TCTATCAAAATGCAAG",2,34.32,10.75,-0.09,0.05,3,1,0,"1 nonsynonymous","A42D",1
"lib2","SARS-CoV-2","TCTATCAAATTTACCG",1,46.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F126H C150F",2
"lib2","SARS-CoV-2","TCTATCAACCGAAGTC",2,28.47,10.17,-0.67,0.1,2.11,1.06,0.01,">1 nonsynonymous","D90T D98I",2
"lib2","SARS-CoV-2","TCTATCAAGAGCACCA",14,432.53,9.48,-1.36,0.06,2.33,1.07,0,">1 nonsynonymous","K56V D98V P169L",3
"lib2","SARS-CoV-2","TCTATCAATACTTCCT",2,109.22,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C61N D68Q",2
"lib2","SARS-CoV-2","TCTATCACAGCGTATG",6,66.35,9.03,-1.81,0.06,2.71,1.05,0,">1 nonsynonymous","A14E K128W G166S",3
"lib2","SARS-CoV-2","TCTATCAGAAAGATAT",7,71.83,9.9,-0.93,0.05,2.91,1.09,0,"1 nonsynonymous","N118C",1
"lib2","SARS-CoV-2","TCTATCCATAGTAACT",10,64.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33R G86D F99N N130M D137M",5
"lib2","SARS-CoV-2","TCTATCCATCCACAGC",1,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I A14V Y35Q S43L",4
"lib2","SARS-CoV-2","TCTATCCATTCAGTTG",6,1.64,NA,NA,NA,NA,NA,NA,"stop","F17G S69* V115L R136L",4
"lib2","SARS-CoV-2","TCTATCCCCCGCCGAC",3,0.2,NA,NA,NA,NA,NA,NA,"stop","N120L F185*",2
"lib2","SARS-CoV-2","TCTATCCTCACCCCAA",4,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V V77G A89Y G101D V115R",5
"lib2","SARS-CoV-2","TCTATCCTTACCCAGT",2,60.33,10.88,0.04,0.06,2.94,1.08,0,">1 nonsynonymous","L162I T201A",2
"lib2","SARS-CoV-2","TCTATCGACTGATAAT",9,43.44,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D90P K199M",2
"lib2","SARS-CoV-2","TCTATCGCCACACCGT",6,98.28,9.45,-1.39,0.06,2.06,1.06,0,">1 nonsynonymous","F12L C61D R136V",3
"lib2","SARS-CoV-2","TCTATCGCCCATACAG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","N4F I28S F62* G83D G101* F156V",6
"lib2","SARS-CoV-2","TCTATCGCTAGAATAC",7,348.1,9.05,-1.79,0.05,2.72,1.09,0,">1 nonsynonymous","N120V Q176H",2
"lib2","SARS-CoV-2","TCTATCGTCAAAATAG",14,86.09,6,-4.83,1.01,1.5,1.18,0.02,">1 nonsynonymous","C6G A81R F99Y",3
"lib2","SARS-CoV-2","TCTATCGTCCCTACGA",2,11.09,6.05,-4.78,0.41,1.94,1.04,0,">1 nonsynonymous","V37G F44A R73S D112L S147F G155H V173R",7
"lib2","SARS-CoV-2","TCTATCTAATCCATAA",1,13.04,6,-4.84,2,1.5,1.22,0.07,">1 nonsynonymous","T3M F99N I138A",3
"lib2","SARS-CoV-2","TCTATCTCCTTATCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4W F44V L131F",3
"lib2","SARS-CoV-2","TCTATCTGGAAACAAA",6,127.91,9.41,-1.42,0.07,2.29,1.09,0,">1 nonsynonymous","F8V V32P I142T",3
"lib2","SARS-CoV-2","TCTATCTTGTATATTA",4,95.99,10.46,-0.38,0.05,2.93,1.04,0,">1 nonsynonymous","E10S C61L",2
"lib2","SARS-CoV-2","TCTATGAAGAATCCGT",9,192.75,10.78,-0.05,0.05,2.94,1.09,0,">1 nonsynonymous","V37L P149T",2
"lib2","SARS-CoV-2","TCTATGAATAGCTAGT",12,2.46,NA,NA,NA,NA,NA,NA,"stop","I28* G152K",2
"lib2","SARS-CoV-2","TCTATGAATCATTCAC",5,59.35,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G9R N92L G116Q",3
"lib2","SARS-CoV-2","TCTATGACAAAACAGT",2,9.27,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L5F N64I G101Q F134A V153I F160L",6
"lib2","SARS-CoV-2","TCTATGAGACCTAAAC",1,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T Q84S W106T R124G G155F",5
"lib2","SARS-CoV-2","TCTATGAGCTTATTTA",13,11.22,NA,NA,NA,NA,NA,NA,"stop","N58V T85S D98* N157K",4
"lib2","SARS-CoV-2","TCTATGAGGTTAGAAT",5,14.91,7.48,-3.35,0.4,1.5,1.03,0.06,">1 nonsynonymous","F62C Y93T C195Q",3
"lib2","SARS-CoV-2","TCTATGAGTGAATCCT",8,63.77,10.62,-0.22,0.04,2.89,1.04,0,">1 nonsynonymous","L5V V65G",2
"lib2","SARS-CoV-2","TCTATGATAAAACGTA",9,60.06,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","W23A K87R A105D",3
"lib2","SARS-CoV-2","TCTATGATCGATGACC",2,19.74,7.84,-2.99,0.18,2.58,1.02,0.01,"1 nonsynonymous","Y143D",1
"lib2","SARS-CoV-2","TCTATGATCTATTTGA",6,42.62,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F70L V180R",2
"lib2","SARS-CoV-2","TCTATGCAACATAATA",4,65.39,10.85,0.01,0.08,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTATGCCGACGGTTG",1,36.54,9.63,-1.21,0.07,2.8,1.16,0,">1 nonsynonymous","N120M G166V",2
"lib2","SARS-CoV-2","TCTATGCTGTACGATT",8,69.04,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11S D97Y V115P Y165L Y175S",5
"lib2","SARS-CoV-2","TCTATGGACATCTTAG",1,0,NA,NA,NA,NA,NA,NA,"stop","L95* C150T",2
"lib2","SARS-CoV-2","TCTATGGAGACACAAG",11,234.7,10.47,-0.37,0.04,2.85,1.04,0,">1 nonsynonymous","G155L N171T",2
"lib2","SARS-CoV-2","TCTATGGCGTCATATG",4,0.54,NA,NA,NA,NA,NA,NA,"stop","C49M A105P Y119F S147*",4
"lib2","SARS-CoV-2","TCTATGGGAGACCCGC",5,43.34,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","T15C K48W L95K",3
"lib2","SARS-CoV-2","TCTATGGGTAGCTCAA",7,35.9,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A14S L38I N58S R73W D137S",5
"lib2","SARS-CoV-2","TCTATGTAATCTGTTC",4,62.79,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","S113I Y121V K128M",3
"lib2","SARS-CoV-2","TCTATGTAGAGATAAA",8,135.61,8.65,-2.19,0.06,2.39,1.06,0,">1 nonsynonymous","Y39W A89C E154Y",3
"lib2","SARS-CoV-2","TCTATGTCTAATCAAC",16,82.29,6.32,-4.52,0.67,1.5,1.25,0.03,">1 nonsynonymous","G83F Y93G W106F P133Y",4
"lib2","SARS-CoV-2","TCTATGTGGTCCGTGA",5,38.56,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y35E Q84I F99I",3
"lib2","SARS-CoV-2","TCTATGTTTAATCCCA",2,25.83,10.6,-0.24,0.04,2.95,1.03,0,">1 nonsynonymous","D34C T201E",2
"lib2","SARS-CoV-2","TCTATTAAAAAGATCT",6,36.34,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C49R N120S T140F",3
"lib2","SARS-CoV-2","TCTATTAAACAAAGAA",12,91.69,10.67,-0.16,0.03,2.94,1.06,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","TCTATTAAACAATAGA",2,21.83,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","T46N S69L G116D E141T Q163M V173A E186Y",7
"lib2","SARS-CoV-2","TCTATTAACCTGCTAT",3,42.03,7.69,-3.15,0.22,1.5,1.06,0.02,">1 nonsynonymous","E135N G172S",2
"lib2","SARS-CoV-2","TCTATTAAGATACTAT",4,172.51,10.42,-0.41,0.05,2.9,1.09,0,">1 nonsynonymous","I138N N151T K199W",3
"lib2","SARS-CoV-2","TCTATTAGATCAACAG",7,4.46,NA,NA,NA,NA,NA,NA,"stop","K48*",1
"lib2","SARS-CoV-2","TCTATTAGTATATAAA",10,38.19,6.18,-4.65,0.43,1.5,1.15,0.01,">1 nonsynonymous","E10V V77S",2
"lib2","SARS-CoV-2","TCTATTATAATTACCT",12,120.96,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","C6K F44P Y50N",3
"lib2","SARS-CoV-2","TCTATTATATACCCTG",13,88.33,6.94,-3.9,0.39,1.5,1.2,0.03,">1 nonsynonymous","R25W S41E",2
"lib2","SARS-CoV-2","TCTATTATCTCAAAGA",6,66.69,6,-4.84,1.8,1.5,1.13,0.01,">1 nonsynonymous","C6N A89R P177D",3
"lib2","SARS-CoV-2","TCTATTCAAAAATGAA",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33W D97A S129E T201R",4
"lib2","SARS-CoV-2","TCTATTCACGGGATAT",9,189.38,10.83,-0.01,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTATTCATTATCCGA",2,79.09,6,-4.84,2,1.89,1.15,0.01,">1 nonsynonymous","D34A V103M G155V",3
"lib2","SARS-CoV-2","TCTATTCCGTATTGGG",3,14.14,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19E F44H D112N",3
"lib2","SARS-CoV-2","TCTATTCCTACACAAG",4,0.27,NA,NA,NA,NA,NA,NA,"stop","K94E A105L D137*",3
"lib2","SARS-CoV-2","TCTATTCGGTCGTAAA",5,2.98,NA,NA,NA,NA,NA,NA,"stop","F167*",1
"lib2","SARS-CoV-2","TCTATTCTAAACTACG",3,28.44,10.55,-0.28,0.07,2.83,1.15,0,">1 nonsynonymous","G83F F134Q",2
"lib2","SARS-CoV-2","TCTATTCTCCGATGAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63C A81P",2
"lib2","SARS-CoV-2","TCTATTGAATAATTAA",5,22.92,8.68,-2.15,0.11,2.75,1.19,0.01,"1 nonsynonymous","Y143N",1
"lib2","SARS-CoV-2","TCTATTGCCCTAACCG",10,1.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78F N107P A145Y F160P L183E",5
"lib2","SARS-CoV-2","TCTATTTACCAGTTTT",2,0.42,NA,NA,NA,NA,NA,NA,"stop","A14P N107H Y123* I142G",4
"lib2","SARS-CoV-2","TCTATTTCCCGATGGA",6,25.77,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C49G P149V A190H",3
"lib2","SARS-CoV-2","TCTATTTCGCTCAATA",9,122.24,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","G9L G101R",2
"lib2","SARS-CoV-2","TCTATTTGAATCACCT",3,23.62,7.85,-2.98,0.24,1.74,1.15,0.02,">1 nonsynonymous","K48L Q144L G152V",3
"lib2","SARS-CoV-2","TCTATTTTATACTTTC",15,157.47,10.47,-0.37,0.06,2.7,1.06,0,">1 nonsynonymous","S36F A190L T201I",3
"lib2","SARS-CoV-2","TCTATTTTCTGCGATA",2,15.2,10.8,-0.04,0.05,2.83,1.19,0,">1 nonsynonymous","T55S N130S",2
"lib2","SARS-CoV-2","TCTATTTTTCGTACCC",3,150.66,9.15,-1.69,0.07,1.8,1.09,0,">1 nonsynonymous","V37S E141L P149R Y165F",4
"lib2","SARS-CoV-2","TCTCAAAAAATGAAAC",8,216.99,8.51,-2.32,0.1,3,1.05,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","TCTCAAACAATCATCG",1,14.25,10.68,-0.16,0.48,2.4,1,0.08,"wildtype","",0
"lib2","SARS-CoV-2","TCTCAAACCAGACTCC",3,8.21,6,-4.84,2,3,1.08,0.04,">1 nonsynonymous","R27T C49Y G116S R124L T170I",5
"lib2","SARS-CoV-2","TCTCAAACGCACCAAA",3,19.93,7.16,-3.68,0.19,1.5,1.03,0.02,">1 nonsynonymous","Y35K N58H R136P",3
"lib2","SARS-CoV-2","TCTCAAACGTAGTGAT",7,56.92,10.47,-0.36,0.04,2.87,1.02,0,">1 nonsynonymous","A18G S41N F47Y P54M",4
"lib2","SARS-CoV-2","TCTCAAAGTGAGACAT",3,39.2,9.7,-1.13,0.09,2.7,1,0,">1 nonsynonymous","S45R D59S G174R",3
"lib2","SARS-CoV-2","TCTCAAATTGCATAGT",4,0.02,NA,NA,NA,NA,NA,NA,"stop","A33T V77E Y119K S129E Q168*",5
"lib2","SARS-CoV-2","TCTCAACAAACTGTGG",9,127.32,10.77,-0.06,0.05,2.91,1.1,0,">1 nonsynonymous","S129H S139T",2
"lib2","SARS-CoV-2","TCTCAACAATGCTGTC",3,34.95,10.72,-0.11,0.04,2.9,1.08,0,">1 nonsynonymous","C61H S129A",2
"lib2","SARS-CoV-2","TCTCAACACACTGTTA",4,3.37,NA,NA,NA,NA,NA,NA,"stop","C49* A81V N110K K198N",4
"lib2","SARS-CoV-2","TCTCAACACAGCGCTA",6,37.71,9.89,-0.95,0.12,2.13,1.05,0.01,">1 nonsynonymous","D97Q T140L G152K F185L",4
"lib2","SARS-CoV-2","TCTCAACCACTGAGAC",1,27.54,9.08,-1.76,0.04,2.96,1.03,0,">1 nonsynonymous","C61D G174V",2
"lib2","SARS-CoV-2","TCTCAACTATGAACAA",5,0.37,NA,NA,NA,NA,NA,NA,"stop","A89F D98* K128F",3
"lib2","SARS-CoV-2","TCTCAACTCAACAAAT",1,12.97,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","Y93D S147D",2
"lib2","SARS-CoV-2","TCTCAACTGCGTACGG",6,48.91,6.42,-4.42,0.65,1.5,1.21,0.04,">1 nonsynonymous","F44T F47W G86S T100I S139R",5
"lib2","SARS-CoV-2","TCTCAACTTGGCGCAA",5,39.35,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","R179D",1
"lib2","SARS-CoV-2","TCTCAAGAAAATATAA",7,130.5,10.85,0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCAAGAAGCAAAGC",2,1.28,NA,NA,NA,NA,NA,NA,"stop","N120* Q168L V181C",3
"lib2","SARS-CoV-2","TCTCAAGACGTCTCTA",2,50.44,10.17,-0.67,0.05,2.87,1,0,">1 nonsynonymous","G116W P149M",2
"lib2","SARS-CoV-2","TCTCAAGATTAAAAAT",6,24.71,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","A42W G86L A105G",3
"lib2","SARS-CoV-2","TCTCAAGGATTATTAT",1,17.25,10.43,-0.41,0.1,2.82,1.13,0.01,">1 nonsynonymous","E135M V153E",2
"lib2","SARS-CoV-2","TCTCAAGTAACAAAGC",3,47.7,10.68,-0.16,0.06,2.88,1.05,0,"1 nonsynonymous","V173G",1
"lib2","SARS-CoV-2","TCTCAAGTCAGTGAAC",4,27.98,10.21,-0.62,0.15,2.1,1.04,0.01,">1 nonsynonymous","T100G L187P",2
"lib2","SARS-CoV-2","TCTCAAGTGGGCCGAA",9,99.36,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","R16L T63V I88E K128E",4
"lib2","SARS-CoV-2","TCTCAATACACGCATA",5,75.55,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F17T F99H L122T S147K",4
"lib2","SARS-CoV-2","TCTCAATCAACGCAAT",1,37.31,10.52,-0.32,0.05,3,1.01,0,">1 nonsynonymous","D59R I138Q P191N",3
"lib2","SARS-CoV-2","TCTCAATCAATATCAA",1,18.92,10.82,-0.02,0.07,3,1.02,0.01,"1 nonsynonymous","N64A",1
"lib2","SARS-CoV-2","TCTCAATCATCGACAC",20,363.99,11.03,0.2,0.04,2.94,1.06,0,"1 nonsynonymous","Y123K",1
"lib2","SARS-CoV-2","TCTCAATCCCCTATAG",8,159.01,7.9,-2.94,0.12,1.68,1.1,0,">1 nonsynonymous","C31V N109H S129P",3
"lib2","SARS-CoV-2","TCTCAATGGTTCCCAT",1,0.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67F E154V K198E",3
"lib2","SARS-CoV-2","TCTCAATTATTAGCGG",11,287.57,9.15,-1.69,0.03,2.82,1.09,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","TCTCAATTGGGTGCAG",1,2.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39Q V71G N118V",3
"lib2","SARS-CoV-2","TCTCACAACACACAAA",1,5.19,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","G51Q C61A N107R Y121R T201Q",5
"lib2","SARS-CoV-2","TCTCACACAATAGAAC",5,1.44,NA,NA,NA,NA,NA,NA,"stop","N40T K48T N107K G174* A190G",5
"lib2","SARS-CoV-2","TCTCACACGTCCACGG",1,8.91,9.33,-1.51,0.31,1.85,1.08,0.02,"1 nonsynonymous","F12N",1
"lib2","SARS-CoV-2","TCTCACAGATGCGCGA",5,29.54,10.44,-0.4,0.05,2.88,1.09,0,"1 nonsynonymous","N13D",1
"lib2","SARS-CoV-2","TCTCACAGTGTGCAAA",11,207.63,10.73,-0.1,0.02,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCTCACATAACCCCCG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","D34R T63* E135V G172Y",4
"lib2","SARS-CoV-2","TCTCACCCTACGCAAG",2,1.94,NA,NA,NA,NA,NA,NA,"stop","C6Y S19L C61V D68A I80K A105S Y123D V173*",8
"lib2","SARS-CoV-2","TCTCACCGAAGCCCTT",6,71.26,10.81,-0.02,0.04,2.98,1.04,0,"1 nonsynonymous","A22R",1
"lib2","SARS-CoV-2","TCTCACCTCCACTTAA",5,144.73,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I2T S29V C61S Y123K Q176F",5
"lib2","SARS-CoV-2","TCTCACCTTTTATAAG",3,39.1,10.78,-0.05,0.05,3,1,0,">1 nonsynonymous","I2Q D97V S139G",3
"lib2","SARS-CoV-2","TCTCACGCAAACCCTA",12,139.92,10.66,-0.18,0.04,2.96,1.06,0,">1 nonsynonymous","L5P T85V Q144G",3
"lib2","SARS-CoV-2","TCTCACGGTCAAGAAA",7,90.87,10.8,-0.03,0.04,2.93,1.04,0,">1 nonsynonymous","T15E S129D",2
"lib2","SARS-CoV-2","TCTCACGTTGAACGAA",5,89.74,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C49Y L57S G83S D97A S147K N157I Q163G",7
"lib2","SARS-CoV-2","TCTCACTGCATGACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","L162*",1
"lib2","SARS-CoV-2","TCTCACTTAACTTTAT",4,52.13,10.73,-0.1,0.05,2.89,1.13,0,">1 nonsynonymous","K56M K199M",2
"lib2","SARS-CoV-2","TCTCAGAATAAATTTA",6,100.34,10.66,-0.18,0.03,2.92,1.08,0,"1 nonsynonymous","T15R",1
"lib2","SARS-CoV-2","TCTCAGACGATGTGGT",9,74.57,8.98,-1.86,0.13,1.9,1.14,0.01,">1 nonsynonymous","C6P K48N F160G",3
"lib2","SARS-CoV-2","TCTCAGAGATTGAGTC",3,30.2,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S36V F47D R73L",3
"lib2","SARS-CoV-2","TCTCAGGCATAACGGC",3,87.47,8.41,-2.42,0.16,2.29,1.04,0.01,">1 nonsynonymous","A14V G174I",2
"lib2","SARS-CoV-2","TCTCAGGCTTTAAATT",3,17.06,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y50F K87W W106R R136I F156T",5
"lib2","SARS-CoV-2","TCTCAGGGGGACTCCC",2,12.78,10.82,-0.02,0.08,3,1.01,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","TCTCAGTAAAAGAACA",2,11.43,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","Y91M D97Y A105R P149L A192G",5
"lib2","SARS-CoV-2","TCTCAGTATCTATAAG",7,85.83,10.78,-0.06,0.05,2.84,1.17,0,">1 nonsynonymous","T3S K56R",2
"lib2","SARS-CoV-2","TCTCAGTGGAAGACAC",2,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46L T63G F70M R78S Q84H Y119V",6
"lib2","SARS-CoV-2","TCTCATAATTACGGTG",17,2.29,NA,NA,NA,NA,NA,NA,"stop","F99* R124I C158W",3
"lib2","SARS-CoV-2","TCTCATACCATTGTTT",3,19.96,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","W23M Y35K T100N",3
"lib2","SARS-CoV-2","TCTCATACCGATAGGG",2,15.28,9.49,-1.35,0.38,1.5,1,0.07,">1 nonsynonymous","T3I V20I L38N",3
"lib2","SARS-CoV-2","TCTCATAGAAAGCATA",2,36.09,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L5M G9K G86F N107S A145C A192F K199L",7
"lib2","SARS-CoV-2","TCTCATAGTTTTGGAG",6,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V F99P Y119P P149Y P161T",5
"lib2","SARS-CoV-2","TCTCATATAAAAAATA",7,96.83,9.76,-1.08,0.07,2.03,1.03,0,">1 nonsynonymous","F17G D59G T100V",3
"lib2","SARS-CoV-2","TCTCATATAAGAATAA",5,73.56,10.83,0,0.05,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCATATCTCAAAGG",2,8.31,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L95S Y165K",2
"lib2","SARS-CoV-2","TCTCATCAGCCGTAGC",2,31.9,10.05,-0.79,0.12,2.17,1.02,0.01,"1 nonsynonymous","W106L",1
"lib2","SARS-CoV-2","TCTCATCCGATTTAGT",2,2.05,NA,NA,NA,NA,NA,NA,"stop","A14F R27* V37E S53V",4
"lib2","SARS-CoV-2","TCTCATCTCAACGAAT",2,46.26,10.83,-0.01,0.06,2.95,1.01,0,"1 nonsynonymous","K132T",1
"lib2","SARS-CoV-2","TCTCATGAAATCGATA",3,39.52,9.83,-1,0.12,2.32,1.08,0.01,"1 nonsynonymous","F8T",1
"lib2","SARS-CoV-2","TCTCATGAAGGCGTCA",6,43.98,8.11,-2.72,0.19,1.5,1.07,0.02,">1 nonsynonymous","P54Q V65R P161S",3
"lib2","SARS-CoV-2","TCTCATGAGTATTGAC",7,24.46,6,-4.84,2,1.5,1.12,0.07,">1 nonsynonymous","G9T T15I L95S",3
"lib2","SARS-CoV-2","TCTCATGCGTATTCCC",3,106.66,8.83,-2.01,0.06,2.4,1.09,0,">1 nonsynonymous","W106M A145R",2
"lib2","SARS-CoV-2","TCTCATGCTCCGCAAG",3,116.62,10.87,0.03,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCATGTGTCCTTCG",1,54.21,10.24,-0.6,0.07,2.83,1.02,0,">1 nonsynonymous","A14V N58K S200W",3
"lib2","SARS-CoV-2","TCTCATTCAAGGCCAG",5,54.12,10.79,-0.05,0.05,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCATTGATATTTCT",2,53.88,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","TCTCCAAACTGTCAGG",2,16.69,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","TCTCCAACAGCACCTG",4,13.45,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","R27M R78W T100D G152C",4
"lib2","SARS-CoV-2","TCTCCAACCTTATGCG",5,25.97,10.21,-0.63,0.14,2.49,1.01,0.01,">1 nonsynonymous","F99L S129N",2
"lib2","SARS-CoV-2","TCTCCAAGTTTCCACC",8,0.32,NA,NA,NA,NA,NA,NA,"stop","F8L Y39S Q84* F99Y D112I",5
"lib2","SARS-CoV-2","TCTCCAATCAAACTAA",7,137.99,10.38,-0.46,0.04,2.91,1.06,0,">1 nonsynonymous","S36L K48V",2
"lib2","SARS-CoV-2","TCTCCACCATGCTAGG",18,209.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8K Y175Q",2
"lib2","SARS-CoV-2","TCTCCACGAAACTGAA",3,0.06,NA,NA,NA,NA,NA,NA,"stop","G9T V37S N107L G166*",4
"lib2","SARS-CoV-2","TCTCCACTAGGATGCG",11,2.05,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","TCTCCAGAAATTACCA",2,19.16,9.34,-1.5,0.11,2.97,1.1,0.01,">1 nonsynonymous","L5T Y119P",2
"lib2","SARS-CoV-2","TCTCCATAGAATCAAT",2,15.09,10.19,-0.64,0.37,1.88,1,0.06,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","TCTCCATGTAATACAA",6,50.08,10.51,-0.32,0.05,2.85,1.07,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","TCTCCATTCTCAAAAT",1,40.11,10.22,-0.62,0.05,2.9,1.14,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","TCTCCATTTATGTAGC",1,42.8,6.08,-4.76,0.84,1.5,1.2,0.02,">1 nonsynonymous","N92Q T201L",2
"lib2","SARS-CoV-2","TCTCCATTTCTTCTCG",10,271.41,8.16,-2.68,0.08,2.58,1.09,0,">1 nonsynonymous","P149E Y175V",2
"lib2","SARS-CoV-2","TCTCCCATAAGTGATA",2,38.92,8.68,-2.15,0.1,3,1.05,0,">1 nonsynonymous","G9E T170I",2
"lib2","SARS-CoV-2","TCTCCCCAAATCCCAG",13,4.39,NA,NA,NA,NA,NA,NA,"stop","A105F S113Y N120F D137R T201*",5
"lib2","SARS-CoV-2","TCTCCCCAAGAGATAA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S P161Q",2
"lib2","SARS-CoV-2","TCTCCCCAGTATTGCA",16,11.43,NA,NA,NA,NA,NA,NA,"stop","G9* L60T P177K",3
"lib2","SARS-CoV-2","TCTCCCCGCTAGCACT",4,6.05,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D34L K48L I104S V173I",4
"lib2","SARS-CoV-2","TCTCCCCGTTCCATCA",5,28.75,7.94,-2.9,0.43,1.5,1.18,0.05,">1 nonsynonymous","N1M F8S S45Y",3
"lib2","SARS-CoV-2","TCTCCCGTGATAACGG",1,12.38,10.41,-0.43,0.09,2.95,1.11,0,"1 nonsynonymous","Y121M",1
"lib2","SARS-CoV-2","TCTCCCTAAAATTAAA",9,38.22,6.09,-4.74,0.53,1.5,1.08,0.01,">1 nonsynonymous","N1C K87C N107L",3
"lib2","SARS-CoV-2","TCTCCCTGGCTAACGG",3,18.04,6,-4.84,2,1.5,1.4,0.04,">1 nonsynonymous","T15Y Y50T D68T D112L L125W I142T T148N G174V",8
"lib2","SARS-CoV-2","TCTCCGAAAAATAATT",2,25.44,7.02,-3.82,0.14,1.92,1.08,0,"1 nonsynonymous","G86F",1
"lib2","SARS-CoV-2","TCTCCGACGCATATGC",1,34.28,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F47C G86P Q163N K198E",4
"lib2","SARS-CoV-2","TCTCCGAGCTGATTAC",1,9.73,NA,NA,NA,NA,NA,NA,"stop","G9E D75Y G83I N107*",4
"lib2","SARS-CoV-2","TCTCCGATGTACCTAA",3,81.56,10.33,-0.51,0.07,2.9,1.06,0,"1 nonsynonymous","D59P",1
"lib2","SARS-CoV-2","TCTCCGCCCACAAAGA",6,120.45,10.77,-0.07,0.04,2.95,1.06,0,">1 nonsynonymous","T100S T201N",2
"lib2","SARS-CoV-2","TCTCCGCGAATATTAA",1,6.93,10.14,-0.7,0.1,1.91,1.06,0,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","TCTCCGCGCACCATGT",5,54.37,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R73V Y123N T201H",3
"lib2","SARS-CoV-2","TCTCCGCTGCGGGTTA",5,11.92,10.19,-0.64,0.22,2.65,1.03,0.03,">1 nonsynonymous","T15R C61Y Q163G",3
"lib2","SARS-CoV-2","TCTCCGCTGGCGAGAA",1,9.18,6.55,-4.29,0.34,3,1.2,0.02,"1 nonsynonymous","C150P",1
"lib2","SARS-CoV-2","TCTCCGGACACACGAG",4,29.53,10.92,0.08,0.12,2.9,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCCGGATAAGACCA",3,31.97,10.44,-0.39,0.06,2.96,1,0,">1 nonsynonymous","A14T N24R",2
"lib2","SARS-CoV-2","TCTCCTAATATGTGCT",1,27.54,10.72,-0.12,0.05,3,1,0,"1 nonsynonymous","Y21W",1
"lib2","SARS-CoV-2","TCTCCTAGCGCCGCCT",3,59.88,10.83,-0.01,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCCTAGTGACAAAG",13,62.07,8.89,-1.95,0.31,1.5,1,0.06,">1 nonsynonymous","Y50D T201H",2
"lib2","SARS-CoV-2","TCTCCTGACGGACATT",2,0,NA,NA,NA,NA,NA,NA,"stop","S45*",1
"lib2","SARS-CoV-2","TCTCCTGGAAGCTCCT",1,26.32,9.98,-0.85,0.16,1.81,1,0.02,">1 nonsynonymous","T148E V182S",2
"lib2","SARS-CoV-2","TCTCCTGTTGTAAAAC",6,0.51,NA,NA,NA,NA,NA,NA,"stop","W106*",1
"lib2","SARS-CoV-2","TCTCCTTAAAATACCA",1,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20P A42S Y123M",3
"lib2","SARS-CoV-2","TCTCCTTACTATTACA",3,59.07,9.98,-0.86,0.04,2.9,1.04,0,">1 nonsynonymous","C31S R78H",2
"lib2","SARS-CoV-2","TCTCCTTAGGGGCGTA",4,29.94,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","C31S N107M C150R E154V",4
"lib2","SARS-CoV-2","TCTCCTTGACTGGGTA",4,1.69,NA,NA,NA,NA,NA,NA,"stop","K56Y T63Y E141*",3
"lib2","SARS-CoV-2","TCTCCTTGGTTGAATA",4,24.37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y39A I80S A105Q",3
"lib2","SARS-CoV-2","TCTCGAAACAGAGATA",7,60.82,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G83T Y121D",2
"lib2","SARS-CoV-2","TCTCGAAAGCCTGCAC",12,162.2,10.88,0.04,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCGAAAGGTATGCG",17,7.76,NA,NA,NA,NA,NA,NA,"stop","Y21* F44Y Y121T E135Q L162K",5
"lib2","SARS-CoV-2","TCTCGAAAGGTCAGGA",7,0.65,NA,NA,NA,NA,NA,NA,"stop","C6* K56Q R124T",3
"lib2","SARS-CoV-2","TCTCGAACAGGGATAA",15,238.16,10.72,-0.11,0.03,2.99,1.03,0,"1 nonsynonymous","P54G",1
"lib2","SARS-CoV-2","TCTCGAAGCTTCCTGA",2,1.29,NA,NA,NA,NA,NA,NA,"stop","N4T W23* K56S E154T",4
"lib2","SARS-CoV-2","TCTCGAATAAACCGGA",8,221.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R25A D59M T140M P161W P177Q",5
"lib2","SARS-CoV-2","TCTCGACAGGACTCGA",19,115.45,9.28,-1.56,0.14,1.78,1.09,0.01,"1 nonsynonymous","D137I",1
"lib2","SARS-CoV-2","TCTCGACTGAGGCACT",2,29.91,6.24,-4.6,0.36,3,1.2,0,">1 nonsynonymous","Y50K I72T F134L",3
"lib2","SARS-CoV-2","TCTCGACTGCTTGATT",6,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N P96Y",2
"lib2","SARS-CoV-2","TCTCGAGAAAAGAACT",2,37.08,10.71,-0.13,0.1,2.83,1.13,0.01,"1 nonsynonymous","N64C",1
"lib2","SARS-CoV-2","TCTCGAGAGAATGATA",6,53.88,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","E10Y R16C D68G",3
"lib2","SARS-CoV-2","TCTCGAGCTATTTCAG",3,33.28,10.37,-0.47,0.05,2.95,1.06,0,"1 nonsynonymous","F156I",1
"lib2","SARS-CoV-2","TCTCGAGCTGATGTGA",3,0.19,NA,NA,NA,NA,NA,NA,"stop","N1* V32R D97E",3
"lib2","SARS-CoV-2","TCTCGAGTCACAGAAA",1,22.08,9.53,-1.31,0.17,1.94,1.11,0.01,"1 nonsynonymous","Y165N",1
"lib2","SARS-CoV-2","TCTCGAGTCTGTTATT",1,37.68,10.39,-0.45,0.08,2.88,1.08,0,">1 nonsynonymous","A14V E141T P197S",3
"lib2","SARS-CoV-2","TCTCGATCTGAATGAT",3,9.56,NA,NA,NA,NA,NA,0.42,">1 nonsynonymous","I2S A33R L57S G83R D98T V103N L131R P161A F167W",9
"lib2","SARS-CoV-2","TCTCGATTAAAAAACG",1,18.58,10.65,-0.18,0.07,2.78,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCGCACCACCTCGA",6,34.16,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","P7F C49I Y165F",3
"lib2","SARS-CoV-2","TCTCGCCAAAACTTAA",5,40.78,10.35,-0.48,0.05,3,1.02,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","TCTCGCCAAACCACCC",5,0.15,NA,NA,NA,NA,NA,NA,"stop","K87M L131*",2
"lib2","SARS-CoV-2","TCTCGCCGCATAATTT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3D",1
"lib2","SARS-CoV-2","TCTCGCCTCTCCTGAC",2,16.07,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15Y Q84E Y91R P177K",4
"lib2","SARS-CoV-2","TCTCGCGCCCAGCGCT",2,45.47,10.47,-0.36,0.06,3,1,0,"1 nonsynonymous","G116Y",1
"lib2","SARS-CoV-2","TCTCGCGCGGAGTCAT",3,63.89,10.74,-0.1,0.03,2.89,1.1,0,"1 nonsynonymous","S41H",1
"lib2","SARS-CoV-2","TCTCGCGGTAATAGAG",2,44.33,9.95,-0.88,0.09,2.46,1,0,">1 nonsynonymous","L5P A18I",2
"lib2","SARS-CoV-2","TCTCGCTACAATAGAA",1,33.3,9.16,-1.67,0.04,2.93,1,0,">1 nonsynonymous","T15I L122T T170F",3
"lib2","SARS-CoV-2","TCTCGCTGGCAGCCTT",3,78.21,9.44,-1.4,0.1,2.44,1.14,0,">1 nonsynonymous","T85N G116E G152V K199M",4
"lib2","SARS-CoV-2","TCTCGCTTGAGCCCCT",5,51.25,10.45,-0.39,0.06,2.92,1.04,0,"1 nonsynonymous","F17M",1
"lib2","SARS-CoV-2","TCTCGGAATCAGCCCC",1,16.78,6,-4.84,2,3,1.1,0.01,">1 nonsynonymous","P7N V103S P149L G152L",4
"lib2","SARS-CoV-2","TCTCGGACGTACACTA",4,15.35,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","A81T C102R V153F C158M",4
"lib2","SARS-CoV-2","TCTCGGATTCGGTGTT",3,55.49,8.47,-2.37,0.1,1.75,1.1,0,">1 nonsynonymous","A18K Y165R K199I",3
"lib2","SARS-CoV-2","TCTCGGCCAAACTAAT",13,119.14,9.59,-1.24,0.07,1.85,1.11,0,">1 nonsynonymous","R16H Y66G",2
"lib2","SARS-CoV-2","TCTCGGCTCATATCTA",1,3.4,NA,NA,NA,NA,NA,NA,"stop","I2M G9S R27*",3
"lib2","SARS-CoV-2","TCTCGGGAACTGAACT",1,15.93,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23R N40T C49S G83F L162A T201M",6
"lib2","SARS-CoV-2","TCTCGGGTCAACGGCT",2,59.35,10.75,-0.09,0.1,2.53,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCGGTATCTATTAT",12,178.98,9.77,-1.06,0.04,2.92,1.06,0,">1 nonsynonymous","Y91N F156T",2
"lib2","SARS-CoV-2","TCTCGGTTGTTAGAAC",3,35,7.86,-2.97,0.34,1.5,1.14,0.04,">1 nonsynonymous","V52L I88T S139N",3
"lib2","SARS-CoV-2","TCTCGTAAACCAGAAC",14,0.14,NA,NA,NA,NA,NA,NA,"stop","D68N Y123* K128A G166V",4
"lib2","SARS-CoV-2","TCTCGTAATAGAGCCT",7,26.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D137F P149N G152P Y165F",4
"lib2","SARS-CoV-2","TCTCGTAATAGCCACA",2,7.39,9.7,-1.14,0.11,3,1,0.01,">1 nonsynonymous","I2A S43Y N64T I104C Y119R",5
"lib2","SARS-CoV-2","TCTCGTAATTCCACCG",5,4.96,NA,NA,NA,NA,NA,NA,"stop","S41R L122* P191F",3
"lib2","SARS-CoV-2","TCTCGTCCAGCGTTGC",1,0.73,NA,NA,NA,NA,NA,NA,"stop","V37G G86D V115* Y175Q",4
"lib2","SARS-CoV-2","TCTCGTCGTTCAACAG",7,31.46,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L95C F99Y G146S",3
"lib2","SARS-CoV-2","TCTCGTTAACCACAAT",9,16.7,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","G51V C61H F185K",3
"lib2","SARS-CoV-2","TCTCGTTAGACCTGAA",2,82.98,10.33,-0.51,0.05,2.89,1.03,0,">1 nonsynonymous","T85V T140P T201L",3
"lib2","SARS-CoV-2","TCTCGTTCGCGCTAAG",1,11.82,10.8,-0.03,0.04,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCGTTGAATGACAT",1,39.61,10.83,-0.01,0.07,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TCTCTAAAAAGACCCA",6,64.52,10.04,-0.8,0.04,2.98,1.03,0,">1 nonsynonymous","N64W E154H",2
"lib2","SARS-CoV-2","TCTCTAAACCGAGACA",11,172.62,6,-4.84,2,1.5,1.12,0,"1 nonsynonymous","F167I",1
"lib2","SARS-CoV-2","TCTCTAAATAACATTC",8,89.94,10.35,-0.48,0.03,2.9,1.01,0,">1 nonsynonymous","T15V L60I",2
"lib2","SARS-CoV-2","TCTCTAACCCACTTCC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","TCTCTAACTAAACTCC",9,86.81,6,-4.84,2,1.5,1.12,0,"1 nonsynonymous","G86V",1
"lib2","SARS-CoV-2","TCTCTAAGATGAACAA",5,5.38,NA,NA,NA,NA,NA,NA,"stop","Y39W N58F T63L V77* P96G F167I",6
"lib2","SARS-CoV-2","TCTCTAATGTGCGATC",4,117.4,10.08,-0.75,0.04,2.92,1.09,0,">1 nonsynonymous","A18S L125C",2
"lib2","SARS-CoV-2","TCTCTAATTACGTGCT",7,853.67,10.74,-0.1,0.02,2.96,1.05,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","TCTCTACGTCTCTAAG",1,6.07,10.35,-0.49,0.05,2.86,1.03,0,"1 nonsynonymous","N13L",1
"lib2","SARS-CoV-2","TCTCTACGTGATATGA",1,35,9.32,-1.51,0.07,1.98,1.03,0,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","TCTCTACTGTTGAACA",4,36.52,6,-4.84,1.39,3,1.09,0,">1 nonsynonymous","D68V Q79R D97V",3
"lib2","SARS-CoV-2","TCTCTATAAAATGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","I138*",1
"lib2","SARS-CoV-2","TCTCTATAAACGCGCA",3,15.07,10.74,-0.1,0.07,2.93,1.12,0,">1 nonsynonymous","T55G V77L",2
"lib2","SARS-CoV-2","TCTCTATCGGCCAGTC",8,212.6,8.19,-2.65,0.15,2.46,1.11,0.01,">1 nonsynonymous","A81V F126N",2
"lib2","SARS-CoV-2","TCTCTATTCATACGCT",5,29.3,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D68R N157R",2
"lib2","SARS-CoV-2","TCTCTCAAATTATTAC",2,24.03,10.34,-0.5,0.07,2.87,1.06,0,">1 nonsynonymous","N1T S53F",2
"lib2","SARS-CoV-2","TCTCTCATGCACCTCA",6,30.75,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G51C K94Y E141G",3
"lib2","SARS-CoV-2","TCTCTCCTAAGGAGAT",7,46.21,9.38,-1.46,0.09,1.82,1.06,0.01,"1 nonsynonymous","V182S",1
"lib2","SARS-CoV-2","TCTCTCGAGTCTTTTT",1,27.2,8.66,-2.17,0.12,2.35,1.15,0.01,"1 nonsynonymous","P161N",1
"lib2","SARS-CoV-2","TCTCTCGCCTAACTAC",7,7.9,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","G86S G101S P149T T201D",4
"lib2","SARS-CoV-2","TCTCTCTAAAAGTGTC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2F G51N D59K N107L N118S",5
"lib2","SARS-CoV-2","TCTCTCTAGTCAATGG",6,1.25,NA,NA,NA,NA,NA,NA,"stop","F44M D59* R73S",3
"lib2","SARS-CoV-2","TCTCTCTGCTTACTCA",1,10.5,10.28,-0.56,0.13,2.73,1.26,0.01,">1 nonsynonymous","S53T D59I G152N",3
"lib2","SARS-CoV-2","TCTCTGAATACAATGA",1,4.76,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95V",1
"lib2","SARS-CoV-2","TCTCTGACCGAGACTG",1,20.55,10.19,-0.64,0.07,2.81,1.07,0,">1 nonsynonymous","I28V E141F",2
"lib2","SARS-CoV-2","TCTCTGACGCTCGAGG",1,0.97,NA,NA,NA,NA,NA,NA,"stop","R16* Q84R N107I S113M",4
"lib2","SARS-CoV-2","TCTCTGACTATTAATG",1,32.69,10.56,-0.28,0.07,2.81,1.2,0,">1 nonsynonymous","G116E G146S",2
"lib2","SARS-CoV-2","TCTCTGAGTAGTTGCT",3,0.82,NA,NA,NA,NA,NA,NA,"stop","R78F L183H T201*",3
"lib2","SARS-CoV-2","TCTCTGGATGTCTGAA",10,101.49,9.07,-1.77,0.05,2.44,1.06,0,">1 nonsynonymous","T15S N107M",2
"lib2","SARS-CoV-2","TCTCTGTGTGTTACTT",1,59.53,10.61,-0.23,0.11,2.74,1.28,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","TCTCTGTTATGTGAAC",13,90.2,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","L38S K87G G152I V180G",4
"lib2","SARS-CoV-2","TCTCTTAAAACCCAGT",7,0.98,NA,NA,NA,NA,NA,NA,"stop","L5R L57* V77K L111M K132M",5
"lib2","SARS-CoV-2","TCTCTTAAATAAAAAG",5,94.41,9.62,-1.22,0.11,2.09,1.1,0,"1 nonsynonymous","F8E",1
"lib2","SARS-CoV-2","TCTCTTAAATTGAAAC",8,37.63,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F17A N24T T55C G101R",4
"lib2","SARS-CoV-2","TCTCTTACCTTCCAGA",5,31.97,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","T46L S139F P149H N171R",4
"lib2","SARS-CoV-2","TCTCTTACGGGAACCC",1,12.84,8.47,-2.37,0.46,1.5,1.15,0.07,">1 nonsynonymous","L5K P7L Y175V",3
"lib2","SARS-CoV-2","TCTCTTACTATTAAAT",1,47.01,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D34R S69G S113F",3
"lib2","SARS-CoV-2","TCTCTTATACACCCCA",1,33.63,9.35,-1.48,0.16,1.78,1.1,0.01,">1 nonsynonymous","R16L S29A K48M D97T N109M",5
"lib2","SARS-CoV-2","TCTCTTCACCCAATGT",7,29,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13R R25L",2
"lib2","SARS-CoV-2","TCTCTTCAGCTCCATC",2,40.67,6,-4.84,0.6,2.09,1.18,0.01,">1 nonsynonymous","G86D L162V",2
"lib2","SARS-CoV-2","TCTCTTCATTCCGAAT",2,10.91,11.04,0.21,0.08,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTCTTCCCACGACAC",12,93.21,9.31,-1.52,0.16,1.66,1.13,0.01,">1 nonsynonymous","N40G T55P E76A T100C",4
"lib2","SARS-CoV-2","TCTCTTGGATCTCTAA",10,78.97,9.87,-0.96,0.08,2.45,1.1,0,">1 nonsynonymous","P7Y A14V",2
"lib2","SARS-CoV-2","TCTCTTGGGTATGACG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35R C61A Y159S",3
"lib2","SARS-CoV-2","TCTCTTGTTCGCACCG",2,4.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I K56S K87P P161R",4
"lib2","SARS-CoV-2","TCTCTTTAAGTTGCTA",2,16.17,7.31,-3.53,0.19,1.79,1.07,0.01,">1 nonsynonymous","C6E T63D I72V P161T",4
"lib2","SARS-CoV-2","TCTCTTTCAATGAATT",8,175.06,8.68,-2.16,0.07,2.88,1.09,0,">1 nonsynonymous","G166I Y178C",2
"lib2","SARS-CoV-2","TCTCTTTCCTGAGACC",1,21.61,10.52,-0.31,0.05,2.97,1.02,0,">1 nonsynonymous","N4A I138G",2
"lib2","SARS-CoV-2","TCTCTTTTTTCACTAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E141Y",1
"lib2","SARS-CoV-2","TCTGAAAAACTCTCTC",9,211.26,10.13,-0.7,0.04,2.81,1.08,0,">1 nonsynonymous","S36F L95V Q168S",3
"lib2","SARS-CoV-2","TCTGAAAACGTGGCTA",3,8.32,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","D90C S113H",2
"lib2","SARS-CoV-2","TCTGAAACAAATCACA",2,0.68,NA,NA,NA,NA,NA,NA,"stop","P96I N107L Y119T C150*",4
"lib2","SARS-CoV-2","TCTGAAACGCCAGGGA",2,56.26,10.31,-0.52,0.07,2.9,1.08,0,"1 nonsynonymous","K56W",1
"lib2","SARS-CoV-2","TCTGAAACTATTGCAC",9,206.32,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N64S C158N N171K",3
"lib2","SARS-CoV-2","TCTGAAAGACAGTTCT",2,0.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59M",1
"lib2","SARS-CoV-2","TCTGAAAGCGATTCCC",5,86.14,10.33,-0.5,0.03,2.79,1.01,0,"1 nonsynonymous","Q84F",1
"lib2","SARS-CoV-2","TCTGAAAGGAACATTT",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64L L122D G174E",3
"lib2","SARS-CoV-2","TCTGAAATCGAACGCG",3,48.89,10.88,0.05,0.07,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGAACACGATTTAA",1,26.06,6.22,-4.61,0.81,1.5,1.09,0.03,">1 nonsynonymous","Y39P P82L Y91D T100L R136T",5
"lib2","SARS-CoV-2","TCTGAACGAATACAAT",3,26.75,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y123I G155V G172V",3
"lib2","SARS-CoV-2","TCTGAACTAATGTACG",5,19.03,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","L5A V37T V65F G172C",4
"lib2","SARS-CoV-2","TCTGAACTCAACGCGT",8,1.33,NA,NA,NA,NA,NA,NA,"stop","N1I F47N C158*",3
"lib2","SARS-CoV-2","TCTGAACTCCTAAACT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","L60I D90W P133R C158*",4
"lib2","SARS-CoV-2","TCTGAACTCTTTTGGT",1,25.87,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","L5I V71E D90R G166L Q176G L188R",6
"lib2","SARS-CoV-2","TCTGAACTTTGGTTTT",3,8.86,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","E10L G101E F126L G174M",4
"lib2","SARS-CoV-2","TCTGAAGAATACTTTT",7,100.53,10.9,0.07,0.05,2.89,1.12,0,">1 nonsynonymous","N64S F160R",2
"lib2","SARS-CoV-2","TCTGAAGTGTAGACGG",3,59.53,10.7,-0.14,0.04,2.89,1.1,0,">1 nonsynonymous","S29F S41M",2
"lib2","SARS-CoV-2","TCTGAATAAAGATTCC",3,73.61,10.67,-0.16,0.06,2.88,1.11,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","TCTGAATACCAGATAA",6,28.99,NA,NA,NA,NA,NA,0.21,"1 nonsynonymous","F99P",1
"lib2","SARS-CoV-2","TCTGAATCAACTGACG",4,68.81,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D68W T100P C158R",3
"lib2","SARS-CoV-2","TCTGAATCCATTCTTT",10,45.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","TCTGAATTATACCTAT",3,8.88,6.97,-3.87,0.75,2,1.14,0.07,">1 nonsynonymous","D34S S41M C49N D59C E135W Q176P V181Y",7
"lib2","SARS-CoV-2","TCTGAATTCCCTCGCT",1,23.18,8.43,-2.4,0.26,1.93,1.06,0.05,">1 nonsynonymous","T46Q D90M F134G N151M N171C Y178N",6
"lib2","SARS-CoV-2","TCTGACAAACCCGAAT",7,23.66,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","S41G D90F G116S K128V P149H",5
"lib2","SARS-CoV-2","TCTGACAACGCGGAGT",2,35.86,9.97,-0.87,0.13,2.23,1.03,0.01,"1 nonsynonymous","F17L",1
"lib2","SARS-CoV-2","TCTGACAAGACTGACT",1,24.22,9.66,-1.18,0.07,2.88,1.05,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","TCTGACCAACGCAACT",13,269.77,10.25,-0.59,0.04,2.82,1.04,0,">1 nonsynonymous","R27E K56I T100Q K198V",4
"lib2","SARS-CoV-2","TCTGACCCTATGTAAA",4,10.95,NA,NA,NA,NA,NA,NA,"stop","T55G D75* D90T P177L",4
"lib2","SARS-CoV-2","TCTGACCGAATCGAAG",6,0.52,NA,NA,NA,NA,NA,NA,"stop","E10* K26L N30M Y50K I104R Q168G K199G",7
"lib2","SARS-CoV-2","TCTGACCGTGCTTAGC",2,53.27,9.76,-1.08,0.08,1.94,1.04,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","TCTGACGATATTGTTA",4,29.49,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T55V Q84L K128D N151S C158R",5
"lib2","SARS-CoV-2","TCTGACGCCTAGTATG",3,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V A14C S41D Q144L T170M V180T H189N",7
"lib2","SARS-CoV-2","TCTGACGGAATTTAAG",5,62.39,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","C6G K94F R136T",3
"lib2","SARS-CoV-2","TCTGACGTAGAAAGTC",7,127.6,9.76,-1.07,0.06,2.59,1.02,0,">1 nonsynonymous","N107P F134N",2
"lib2","SARS-CoV-2","TCTGACGTCTGCCTTC",2,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L F167P",2
"lib2","SARS-CoV-2","TCTGACTAACACACGG",6,0.12,NA,NA,NA,NA,NA,NA,"stop","A14F V37* F99E Y119R E141S",5
"lib2","SARS-CoV-2","TCTGACTGTAGTCTTT",10,98.92,6.15,-4.68,0.69,1.5,1.15,0.01,">1 nonsynonymous","N30S D90N Q176I",3
"lib2","SARS-CoV-2","TCTGACTTACTTTGCC",1,10.53,8.66,-2.18,0.36,1.5,1.19,0.04,">1 nonsynonymous","F156W F185R",2
"lib2","SARS-CoV-2","TCTGACTTCCTCACAC",13,233.93,10.78,-0.06,0.03,2.86,1.15,0,"1 nonsynonymous","S45D",1
"lib2","SARS-CoV-2","TCTGAGCCTTAACAAA",11,7.05,NA,NA,NA,NA,NA,NA,"stop","Y39* F47V C61G K114H S129*",5
"lib2","SARS-CoV-2","TCTGAGCGCAATGGAT",2,39.32,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","A14S K26T A81F T100M Q176L A192M",6
"lib2","SARS-CoV-2","TCTGAGCTACCTACCT",19,234.93,10.71,-0.13,0.03,2.93,1.08,0,"1 nonsynonymous","K94H",1
"lib2","SARS-CoV-2","TCTGATAAACGTGACT",16,7.29,NA,NA,NA,NA,NA,NA,"stop","D90R N110P D137G Y143* Y159R",5
"lib2","SARS-CoV-2","TCTGATAACAGTCCCA",1,62.04,10.84,0,0.03,2.93,1.09,0,"1 nonsynonymous","T3P",1
"lib2","SARS-CoV-2","TCTGATAACGACTGTA",2,2.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91L L122P E141Q V180K",4
"lib2","SARS-CoV-2","TCTGATAAGTATCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4M F17* N58A A105D E141S",5
"lib2","SARS-CoV-2","TCTGATACCATTCTAC",4,92.71,10.74,-0.1,0.05,2.93,1.06,0,">1 nonsynonymous","V37Y G146A",2
"lib2","SARS-CoV-2","TCTGATATAATTCGTG",3,0.88,NA,NA,NA,NA,NA,NA,"stop","T3I Y21* R127*",3
"lib2","SARS-CoV-2","TCTGATATATATAAGT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K128V E135V E141M",3
"lib2","SARS-CoV-2","TCTGATATTAATCGTA",5,69.35,10.64,-0.19,0.02,2.93,1.07,0,">1 nonsynonymous","I2R A89S",2
"lib2","SARS-CoV-2","TCTGATCACTGACATA",5,117.18,10.69,-0.14,0.04,2.92,1.08,0,"1 nonsynonymous","A42P",1
"lib2","SARS-CoV-2","TCTGATCATGAATGAG",9,3.85,NA,NA,NA,NA,NA,NA,"stop","T3* F12N D97H W106K",4
"lib2","SARS-CoV-2","TCTGATCCACAAGCTG",3,82.08,10.39,-0.45,0.06,2.83,1.1,0,">1 nonsynonymous","F62R L122V",2
"lib2","SARS-CoV-2","TCTGATCGAATATCCA",8,20.4,6,-4.84,2,1.5,1.3,0.04,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","TCTGATCTCAGCCTTT",3,12.42,6.21,-4.62,0.44,1.5,1.05,0.01,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","TCTGATGATGATATTA",10,170.57,10.84,0,0.05,2.88,1.14,0,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","TCTGATGCCCCCCATA",3,15.56,10.52,-0.31,0.06,2.95,1.07,0,">1 nonsynonymous","K26F T148D",2
"lib2","SARS-CoV-2","TCTGATGCTGATCACA",6,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140C T201V",2
"lib2","SARS-CoV-2","TCTGATGTAGATGTCG",3,91.99,10.48,-0.35,0.06,2.87,1.12,0,">1 nonsynonymous","F44L K199N",2
"lib2","SARS-CoV-2","TCTGATGTCAGGACCA",5,50.67,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37E F99S F160I",3
"lib2","SARS-CoV-2","TCTGATGTGTACGCCT",2,9.2,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","A14L I104S S129P Y165T S184R",5
"lib2","SARS-CoV-2","TCTGATTACCATTGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","S43*",1
"lib2","SARS-CoV-2","TCTGATTCATAAAAAC",1,58.43,10.61,-0.22,0.04,3,1.02,0,">1 nonsynonymous","T3L Y39V D98E V153M",4
"lib2","SARS-CoV-2","TCTGCAAAAAATGAAC",1,6.66,6,-4.84,2,1.5,1.18,0.08,">1 nonsynonymous","N92R C158W",2
"lib2","SARS-CoV-2","TCTGCAACATAAATAA",5,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L D34T L95P",3
"lib2","SARS-CoV-2","TCTGCAACGACAGTTC",4,13.75,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","I28K A105Y",2
"lib2","SARS-CoV-2","TCTGCAATATGTAATT",6,21.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50T D97I G152F",3
"lib2","SARS-CoV-2","TCTGCACAGGCCGACT",3,47.93,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L38H S45L K87I V103T",4
"lib2","SARS-CoV-2","TCTGCACCCTACGAGT",2,31.91,10.77,-0.07,0.06,2.92,1.02,0,">1 nonsynonymous","D98W T148M P197W",3
"lib2","SARS-CoV-2","TCTGCACCCTTTACCC",7,38.22,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G74L F167R",2
"lib2","SARS-CoV-2","TCTGCACTATTTCAGA",4,93.82,10.66,-0.17,0.03,2.91,1.07,0,">1 nonsynonymous","T3L G9A P149T",3
"lib2","SARS-CoV-2","TCTGCACTTTTAAACT",2,37.88,10.87,0.03,0.04,2.97,1.04,0,"1 nonsynonymous","S147Y",1
"lib2","SARS-CoV-2","TCTGCAGATAATGAGC",5,45.52,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G9M S29R F44W G86M Y175S",5
"lib2","SARS-CoV-2","TCTGCATAACCAAATA",3,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H L57Y D90P T148D V173M T201D",6
"lib2","SARS-CoV-2","TCTGCATGAATTGGAC",16,5.46,NA,NA,NA,NA,NA,NA,"stop","V32I Y35A C61* F126S",4
"lib2","SARS-CoV-2","TCTGCATTACAATTTT",9,66.81,7.61,-3.23,0.2,1.5,1.04,0.01,">1 nonsynonymous","C49V Y143M T201L",3
"lib2","SARS-CoV-2","TCTGCATTTCGATGCT",1,5.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T Y91C K114D N120K L183T",5
"lib2","SARS-CoV-2","TCTGCCAAAACAAAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5R C61H P149* F160L",4
"lib2","SARS-CoV-2","TCTGCCAACCAAAGAG",10,60.43,6.19,-4.65,0.63,1.5,1.13,0.02,">1 nonsynonymous","I2R N58A V77L P133G Y159G",5
"lib2","SARS-CoV-2","TCTGCCAGCGGGGGGA",9,96.59,10.78,-0.06,0.04,2.96,1.06,0,"1 nonsynonymous","D98H",1
"lib2","SARS-CoV-2","TCTGCCATGAAATGAA",2,7.52,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","C61K F99S",2
"lib2","SARS-CoV-2","TCTGCCCAGTTACTTG",5,88.22,10.65,-0.18,0.04,2.98,1.05,0,"1 nonsynonymous","T63I",1
"lib2","SARS-CoV-2","TCTGCCCCTAAATAAC",5,61.98,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S41R G172R",2
"lib2","SARS-CoV-2","TCTGCCCTTAGAGAGT",1,41.4,10.83,-0.01,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGCCGACGATATGC",8,101.05,9.69,-1.14,0.08,2.12,1.07,0,">1 nonsynonymous","A14N K48R R136E",3
"lib2","SARS-CoV-2","TCTGCCGATAGAACTA",2,22.11,8.73,-2.11,0.22,2.68,1.02,0.03,">1 nonsynonymous","T85L Y119L V153E",3
"lib2","SARS-CoV-2","TCTGCCGTATAAGATA",1,19.13,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","G9S Y93S G101P Y143S R179A",5
"lib2","SARS-CoV-2","TCTGCCTCTACGCTAC",8,62.92,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","F17M G86P V103M",3
"lib2","SARS-CoV-2","TCTGCCTGTGCATGAC",3,52.92,8.2,-2.64,0.45,1.5,1,0.07,">1 nonsynonymous","F12Y A89D N107H F134L L188R",5
"lib2","SARS-CoV-2","TCTGCCTTTAAACAAA",1,20.18,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I28E C61L Q84R L95G E141G",5
"lib2","SARS-CoV-2","TCTGCGAAATTTATAT",5,117.7,8.54,-2.29,0.06,2.29,1.08,0,">1 nonsynonymous","Y50H R73A",2
"lib2","SARS-CoV-2","TCTGCGAGATATACAG",1,8.79,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A81F E141W",2
"lib2","SARS-CoV-2","TCTGCGAGATGCGGAC",7,154.59,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10F Y121K P149Q P169S R179E",5
"lib2","SARS-CoV-2","TCTGCGATTGCGACAT",3,7.65,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","N13S L60I P82E",3
"lib2","SARS-CoV-2","TCTGCGCACAACTTTA",2,0.56,NA,NA,NA,NA,NA,NA,"stop","Y91N G116I L125S G155*",4
"lib2","SARS-CoV-2","TCTGCGCATAAAAAAC",13,81.33,7.99,-2.84,0.34,1.5,1.14,0.05,">1 nonsynonymous","E10K A18T D98G A105H",4
"lib2","SARS-CoV-2","TCTGCGCGGACCTATT",19,118.72,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F44Q C49V K87Q D98T E154N",5
"lib2","SARS-CoV-2","TCTGCGTATTGTCAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","L38T G74P L122* K199M",4
"lib2","SARS-CoV-2","TCTGCGTCATGCCAAC",11,64.86,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I80T P133K T140R",3
"lib2","SARS-CoV-2","TCTGCGTGTGAATACA",9,119.98,10.84,0.01,0.05,2.9,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGCGTTAAAGTCAC",12,251.52,8.84,-2,0.05,2.7,1.09,0,">1 nonsynonymous","A67Y F156Q",2
"lib2","SARS-CoV-2","TCTGCGTTGCACACAG",9,81.72,10.27,-0.57,0.03,2.97,1,0,"1 nonsynonymous","A33E",1
"lib2","SARS-CoV-2","TCTGCTAAATAGTAAT",1,81.59,10.29,-0.55,0.04,3,1.03,0,"1 nonsynonymous","V11M",1
"lib2","SARS-CoV-2","TCTGCTAACGGAATTA",11,78.07,9.56,-1.28,0.11,2.31,1.05,0,">1 nonsynonymous","F44E T55N R136L",3
"lib2","SARS-CoV-2","TCTGCTAAGCAGCCGT",1,42.13,8.46,-2.37,0.38,1.5,1.21,0.04,">1 nonsynonymous","Y119R P133L",2
"lib2","SARS-CoV-2","TCTGCTAATACAGCAT",3,27.9,10.08,-0.76,0.09,3,1.06,0,">1 nonsynonymous","G9H G152V V153L",3
"lib2","SARS-CoV-2","TCTGCTATCGGGAATT",1,32.7,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A14W D68L I142S V153S",4
"lib2","SARS-CoV-2","TCTGCTCCCAAAAAAT",5,24.16,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F8L G51V V77P K128G",4
"lib2","SARS-CoV-2","TCTGCTCTTGGGGTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S29G G51T N58I A81R S113I",5
"lib2","SARS-CoV-2","TCTGCTGACAAAGCAT",2,5.1,NA,NA,NA,NA,NA,NA,"stop","G9Q S19* A81I C150P P161T P169C",6
"lib2","SARS-CoV-2","TCTGCTGTTATCCCAC",5,7.97,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","I104G Y165K",2
"lib2","SARS-CoV-2","TCTGCTTAAAGATATC",3,158.31,9.37,-1.47,0.06,2.75,1.06,0,"1 nonsynonymous","N107D",1
"lib2","SARS-CoV-2","TCTGCTTACTAACGTA",2,25.14,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","V20L K56C Q84Y L122C N157T V173I",6
"lib2","SARS-CoV-2","TCTGGAAAGTCTGAAG",11,67.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V71K K132Y I138C",3
"lib2","SARS-CoV-2","TCTGGAACACAGAACT",1,10.67,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","L57T T100Y F167C",3
"lib2","SARS-CoV-2","TCTGGAACCGACAGCC",2,38.64,10.43,-0.41,0.08,2.81,1.05,0,"1 nonsynonymous","Y178I",1
"lib2","SARS-CoV-2","TCTGGAAGGATAAATG",23,459.36,10.83,0,0.05,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCTGGAAGTACAATTT",2,16.05,10.64,-0.2,0.08,2.92,1.08,0,">1 nonsynonymous","V37G K56A G152T",3
"lib2","SARS-CoV-2","TCTGGACGTGATTGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","T15N W23E S41L T63N L95P Y165*",6
"lib2","SARS-CoV-2","TCTGGACTTGAACGAA",1,11.59,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5Q C61L Y121G P161R T201M",5
"lib2","SARS-CoV-2","TCTGGAGACGCACCGG",9,217.74,10.67,-0.17,0.01,2.97,1.02,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","TCTGGAGAGTGACACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N I138A P161V",3
"lib2","SARS-CoV-2","TCTGGAGGTTTGCGGA",5,43.39,10.26,-0.57,0.09,2.69,1.01,0,"1 nonsynonymous","L57R",1
"lib2","SARS-CoV-2","TCTGGATAACTTGAAT",9,163.55,6.75,-4.09,0.19,1.57,1.13,0.01,">1 nonsynonymous","S41P Y143G",2
"lib2","SARS-CoV-2","TCTGGATGACCGAGTT",11,182.6,10.56,-0.27,0.04,2.98,1.01,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","TCTGGATGTACGATTG",12,273.67,6.27,-4.56,0.5,1.5,1.16,0.01,">1 nonsynonymous","V65W P177E",2
"lib2","SARS-CoV-2","TCTGGCAATACGCCTA",2,22.29,10.85,0.02,0.1,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGGCAATCCCCGAT",8,152.56,10.85,0.01,0.05,2.96,1.05,0,"1 nonsynonymous","R78K",1
"lib2","SARS-CoV-2","TCTGGCACCTGGATAA",3,0.41,NA,NA,NA,NA,NA,NA,"stop","V20* N64L D98F D112E S129W N151I V182I",7
"lib2","SARS-CoV-2","TCTGGCCAACTGAATT",7,112.57,10.82,-0.02,0.05,2.95,1.05,0,"1 nonsynonymous","T55A",1
"lib2","SARS-CoV-2","TCTGGCCCGAAACTGC",3,8.88,8.47,-2.37,0.38,1.71,1.16,0.03,">1 nonsynonymous","N1G T55G P96N P149W",4
"lib2","SARS-CoV-2","TCTGGCCTCAATATAC",2,19.4,8.84,-2,0.21,1.5,1,0.06,">1 nonsynonymous","V77T Y91A",2
"lib2","SARS-CoV-2","TCTGGCGCCGACATCC",3,75.87,10.84,0,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGGCGTATCGGTGG",12,111.89,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F134P Q144T S200Y",3
"lib2","SARS-CoV-2","TCTGGCTGGATAGTGA",3,22.06,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","I72W",1
"lib2","SARS-CoV-2","TCTGGGAAATGAAGTT",6,83.57,10.79,-0.05,0.09,2.8,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGGGAAATTAAGGC",5,25.9,10.84,0,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGGGAGAAAGGAGC",12,275.07,10.83,0,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGGGATTACTGAAC",4,177.68,8.51,-2.32,0.09,2.6,1.03,0,">1 nonsynonymous","T170V Y178N",2
"lib2","SARS-CoV-2","TCTGGGCAAATAATTC",8,92.55,10.58,-0.25,0.04,2.9,1.07,0,"1 nonsynonymous","A42Y",1
"lib2","SARS-CoV-2","TCTGGGTATAGATGCA",5,79.89,10.77,-0.06,0.05,2.93,1.09,0,"1 nonsynonymous","N130C",1
"lib2","SARS-CoV-2","TCTGGTAACTCAAAGT",5,168.26,10.34,-0.5,0.03,2.99,1.03,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TCTGGTATTTAAGTCC",8,54.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25L I80M G86T S139N",4
"lib2","SARS-CoV-2","TCTGGTTCGTTAACGG",2,35.52,10.82,-0.01,0.07,2.98,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGTAAAGCTAGAAT",7,1.06,NA,NA,NA,NA,NA,NA,"stop","A14R I88* K132F",3
"lib2","SARS-CoV-2","TCTGTAACAAAAGACA",2,11.23,9.71,-1.13,0.15,2.09,1.04,0.01,">1 nonsynonymous","F8I Y39D T55V D97R N151A",5
"lib2","SARS-CoV-2","TCTGTAACGATCGCGG",2,0,NA,NA,NA,NA,NA,NA,"stop","A18E C61* G101D A105Y",4
"lib2","SARS-CoV-2","TCTGTAAGACCGAGTG",3,68.78,10.8,-0.03,0.03,2.95,1.06,0,">1 nonsynonymous","N1V V37I",2
"lib2","SARS-CoV-2","TCTGTAAGACTTTATC",2,28.96,7.9,-2.94,0.24,1.5,1.13,0.02,">1 nonsynonymous","P96A V115C N120M A190L",4
"lib2","SARS-CoV-2","TCTGTAAGGGGATTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D90S Y143* S200M",3
"lib2","SARS-CoV-2","TCTGTAATTGTAGATT",13,317.1,10.18,-0.66,0.03,2.95,1.05,0,">1 nonsynonymous","I2N L125S",2
"lib2","SARS-CoV-2","TCTGTACATCCGCAGA",2,0.51,NA,NA,NA,NA,NA,NA,"stop","C61V P177*",2
"lib2","SARS-CoV-2","TCTGTACCTCAGGTGG",5,15.35,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V20M S113E E135K Y175L",4
"lib2","SARS-CoV-2","TCTGTACTCAAAAATA",3,8.6,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","I104T F167N",2
"lib2","SARS-CoV-2","TCTGTACTGTCTATCC",8,62.58,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12A Y50S C61M P149N Y175H",5
"lib2","SARS-CoV-2","TCTGTATATCCGAAAC",4,58.44,9.56,-1.27,0.1,1.92,1.04,0,"1 nonsynonymous","R136P",1
"lib2","SARS-CoV-2","TCTGTATCAATGGTAA",5,90.7,6.25,-4.58,0.58,1.5,1.14,0.02,">1 nonsynonymous","E10M P82Y C150V Y175V",4
"lib2","SARS-CoV-2","TCTGTATCATTGGAGT",3,0.27,NA,NA,NA,NA,NA,NA,"stop","F8Y D34C P54S Y121* N130R L188P",6
"lib2","SARS-CoV-2","TCTGTATCCCAAGACT",4,33.25,10.79,-0.05,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGTATCGCTGTAAA",5,22.49,6,-4.84,1.91,1.5,1.23,0.03,">1 nonsynonymous","D98V G172D",2
"lib2","SARS-CoV-2","TCTGTCAATACTGTCT",2,15.06,10.37,-0.47,0.09,2.82,1.01,0.01,">1 nonsynonymous","I2W N64Y P96S",3
"lib2","SARS-CoV-2","TCTGTCAATATAGAAA",7,82.62,10.83,0,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTGTCACGACCATAC",5,43.15,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F44E L95S",2
"lib2","SARS-CoV-2","TCTGTCCATAAAAAAC",2,15.68,8.77,-2.06,0.14,1.7,1.08,0.02,">1 nonsynonymous","F12D F62Y S129V",3
"lib2","SARS-CoV-2","TCTGTCCCATTCAAGG",6,126.8,10.05,-0.78,0.09,2.46,1.05,0,">1 nonsynonymous","Y50I F160H K199S",3
"lib2","SARS-CoV-2","TCTGTCCCTGGTATAA",10,125.48,6,-4.84,1.66,1.5,1.17,0.01,">1 nonsynonymous","S43M R124Y P149L N157L",4
"lib2","SARS-CoV-2","TCTGTCCGAACTTAGG",3,15.39,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R27N E76W Y93E",3
"lib2","SARS-CoV-2","TCTGTCCGCTCCCTAA",13,4.47,NA,NA,NA,NA,NA,NA,"stop","N4F F44L G83F R124*",4
"lib2","SARS-CoV-2","TCTGTCCGGCACTTGC",18,4.04,NA,NA,NA,NA,NA,NA,"stop","Y50F D98* V180R",3
"lib2","SARS-CoV-2","TCTGTCGCACACCAAG",1,11.42,8.68,-2.16,0.16,1.5,1,0.01,">1 nonsynonymous","F62R G83V",2
"lib2","SARS-CoV-2","TCTGTCGCCAGATAAA",2,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K P149Y",2
"lib2","SARS-CoV-2","TCTGTCGTCCGCAAGC",7,104.02,9.24,-1.6,0.08,1.85,1.1,0,">1 nonsynonymous","F62V A105Q",2
"lib2","SARS-CoV-2","TCTGTCTCTAATTAGT",10,154.08,9.55,-1.29,0.06,1.97,1.08,0,">1 nonsynonymous","T85G I104C Y178W",3
"lib2","SARS-CoV-2","TCTGTGAAGATGAGTG",2,8.34,10.43,-0.4,0.15,2.89,1.17,0.01,"1 nonsynonymous","N58F",1
"lib2","SARS-CoV-2","TCTGTGAATAAAGTGG",9,70.73,10.63,-0.21,0.15,2.68,1.23,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TCTGTGACAATCAGAC",4,66.92,9.63,-1.21,0.05,2.07,1.03,0,">1 nonsynonymous","K56L A81I",2
"lib2","SARS-CoV-2","TCTGTGCCCGCCAGAA",1,9.71,10.24,-0.6,0.2,2.57,1,0.02,">1 nonsynonymous","I28G Y66M",2
"lib2","SARS-CoV-2","TCTGTGCGATACATTA",1,11.83,10.5,-0.33,0.09,2.92,1,0,">1 nonsynonymous","E10N L60H",2
"lib2","SARS-CoV-2","TCTGTGCTATTAACAT",8,94.56,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","R25I L57M D90T P149M",4
"lib2","SARS-CoV-2","TCTGTGGTAAGCACCC",11,77.49,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F44I S113T C158K",3
"lib2","SARS-CoV-2","TCTGTGTATAAAGTGT",7,102.02,8.65,-2.19,0.06,2.81,1.04,0,">1 nonsynonymous","S147C C158E",2
"lib2","SARS-CoV-2","TCTGTGTCACTGCCGA",1,61.46,10.86,0.03,0.05,2.94,1.07,0,">1 nonsynonymous","A42R F62V T201C",3
"lib2","SARS-CoV-2","TCTGTGTCATTCCGAC",7,50.41,8.62,-2.22,0.22,1.5,1.01,0.02,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","TCTGTGTCCAGACCAG",3,13.69,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V20S K56I F167L",3
"lib2","SARS-CoV-2","TCTGTGTCTATGATAA",3,8.5,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","F12W S41V V103K",3
"lib2","SARS-CoV-2","TCTGTGTCTCCGGCAC",6,59.97,10.35,-0.49,0.07,2.87,1.05,0,">1 nonsynonymous","N4F K114T E141T",3
"lib2","SARS-CoV-2","TCTGTTACGGACTCAA",6,125.23,10.41,-0.43,0.05,2.92,1.03,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","TCTGTTATCAAATTCA",2,79.35,10.03,-0.81,0.08,2.63,1.06,0,">1 nonsynonymous","N109V E141L G155T",3
"lib2","SARS-CoV-2","TCTGTTCAGTAAGCCG",7,90.64,6,-4.84,1.86,1.5,1.2,0.02,">1 nonsynonymous","R27T V37D S43H C61L R124P",5
"lib2","SARS-CoV-2","TCTGTTCTAAAGAACT",7,48.48,6.04,-4.8,1.02,1.5,1.16,0.02,">1 nonsynonymous","F12S T85S N107V V173D",4
"lib2","SARS-CoV-2","TCTGTTCTTGGAAAAT",3,0.95,NA,NA,NA,NA,NA,NA,"stop","T85* K132S",2
"lib2","SARS-CoV-2","TCTGTTGATAAGACCT",6,0.23,NA,NA,NA,NA,NA,NA,"stop","E10* Y93D D98F R127K P149R",5
"lib2","SARS-CoV-2","TCTGTTGCCCAAGCGC",1,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L T55C P96W V173M",4
"lib2","SARS-CoV-2","TCTGTTGTAATGCACA",7,24.59,6,-4.84,1.08,1.5,1.14,0.01,">1 nonsynonymous","N13M D68L T170L",3
"lib2","SARS-CoV-2","TCTGTTTACCCTAACG",6,107.21,9.89,-0.95,0.06,2.54,1.07,0,">1 nonsynonymous","L122G T148E Y165W",3
"lib2","SARS-CoV-2","TCTGTTTATTACAATC",6,14.11,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","R16P C49G F62L",3
"lib2","SARS-CoV-2","TCTGTTTCTGACAGAC",23,262.26,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N40Q K48E A67V I80K",4
"lib2","SARS-CoV-2","TCTGTTTTAACCCAAT",1,59.19,10.78,-0.06,0.07,2.94,1.07,0,">1 nonsynonymous","N4R V37S",2
"lib2","SARS-CoV-2","TCTGTTTTACGCAATA",5,165.91,10.22,-0.62,0.03,2.91,1.04,0,"1 nonsynonymous","P161S",1
"lib2","SARS-CoV-2","TCTTAAAAAAAACAGT",6,131.88,10.82,-0.02,0.05,2.89,1.12,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","TCTTAAAAAAGTGTAT",1,41.07,10.86,0.02,0.09,2.91,1.11,0,"1 nonsynonymous","P149D",1
"lib2","SARS-CoV-2","TCTTAAAACAATTAAG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131G P149Y",2
"lib2","SARS-CoV-2","TCTTAAAACACCAGAC",3,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42M T85M K132A",3
"lib2","SARS-CoV-2","TCTTAAAATGCGTCAA",2,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I T85R",2
"lib2","SARS-CoV-2","TCTTAAACATCGAAAG",2,41.34,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","V37S G83Y V103L T148K N157L",5
"lib2","SARS-CoV-2","TCTTAAACCTTTCTAA",2,14.87,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A33T G51P L60H",3
"lib2","SARS-CoV-2","TCTTAAACGCAACCTG",2,40.22,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G51S G86R Q176S",3
"lib2","SARS-CoV-2","TCTTAAAGAATTTGCC",2,19.77,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","Y21L S45H T55R C102F V115M",5
"lib2","SARS-CoV-2","TCTTAAAGCTGTCTGG",2,9.54,10.36,-0.48,0.06,2.93,1.02,0,"1 nonsynonymous","I80L",1
"lib2","SARS-CoV-2","TCTTAAAGGGATTAAT",7,62.9,8.43,-2.41,0.21,1.5,1.09,0.02,">1 nonsynonymous","V77H N130A",2
"lib2","SARS-CoV-2","TCTTAAAGGTGAGCGG",1,12.56,10.86,0.02,0.09,2.81,1.19,0,"synonymous","",0
"lib2","SARS-CoV-2","TCTTAAATAAACGAAA",8,48.53,9.18,-1.66,0.4,1.5,1,0.08,">1 nonsynonymous","D90A V103C",2
"lib2","SARS-CoV-2","TCTTAAATAACCATAC",3,20.12,10.01,-0.82,0.29,1.5,1,0.03,">1 nonsynonymous","P7L K48H D90H D97L",4
"lib2","SARS-CoV-2","TCTTAAATCCGCCTCT",1,2.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S V71N",2
"lib2","SARS-CoV-2","TCTTAACAAGCTATGA",1,1.44,NA,NA,NA,NA,NA,NA,"stop","L5* T100N E135T I142R P197M",5
"lib2","SARS-CoV-2","TCTTAACACTCAAATC",2,14.83,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","F12S G86N P149N F156N",4
"lib2","SARS-CoV-2","TCTTAACAGAAGCCCC",1,17.24,10.73,-0.11,0.07,2.97,1.04,0,"1 nonsynonymous","G83M",1
"lib2","SARS-CoV-2","TCTTAACCAATAAGCA",1,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21K G83C G86T F167S",4
"lib2","SARS-CoV-2","TCTTAACCCTTCATGA",2,77.31,10.74,-0.1,0.04,2.88,1.07,0,">1 nonsynonymous","L122Y C195N",2
"lib2","SARS-CoV-2","TCTTAACCTGTCGCAA",1,80.6,10.78,-0.06,0.06,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TCTTAACGAGGAGTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","D98* N120R",2
"lib2","SARS-CoV-2","TCTTAACGATTTTCAC",6,94.93,10.4,-0.44,0.04,2.94,1.04,0,">1 nonsynonymous","Y39M Q79Y",2
"lib2","SARS-CoV-2","TCTTAACGCAAAGTAT",2,41.3,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G101F S139R",2
"lib2","SARS-CoV-2","TCTTAACTTTAAGTAT",10,12.39,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","K87T W106K P149M L183G",4
"lib2","SARS-CoV-2","TCTTAAGACATGCGAT",5,70.55,10.67,-0.16,0.05,2.85,1.16,0,"1 nonsynonymous","S139E",1
"lib2","SARS-CoV-2","TCTTAAGACATGGAAT",9,198.16,9.83,-1,0.05,2.67,1.07,0,">1 nonsynonymous","E135T S147C",2
"lib2","SARS-CoV-2","TCTTAAGACTGAAACT",5,25.13,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","F99K",1
"lib2","SARS-CoV-2","TCTTAAGATAAGGTGA",3,9.5,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y50R L57C",2
"lib2","SARS-CoV-2","TCTTAAGCCCTCCGCT",6,29.96,9.02,-1.82,0.11,1.61,1.09,0,">1 nonsynonymous","F99V R136Q",2
"lib2","SARS-CoV-2","TCTTAAGCGAGTACCC",6,66.77,10.44,-0.39,0.06,2.91,1.06,0,">1 nonsynonymous","P7K V153A F160I",3
"lib2","SARS-CoV-2","TCTTAAGGAGAGCTTT",3,16.59,9.62,-1.22,0.33,1.5,1,0.05,">1 nonsynonymous","G86R N130Q",2
"lib2","SARS-CoV-2","TCTTAAGGTCAATAAA",1,43.18,9.73,-1.1,0.08,2.13,1.07,0,">1 nonsynonymous","F8A T55G",2
"lib2","SARS-CoV-2","TCTTAATACATTGCCG",3,44.92,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A33Q Y91V N120L S139Y L162M",5
"lib2","SARS-CoV-2","TCTTAATATAATCACA",7,33.06,6,-4.84,1.07,3,1.22,0,">1 nonsynonymous","F8S N13C V20R S41N F62R Y121S",6
"lib2","SARS-CoV-2","TCTTAATGATCCACCC",1,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21S D112E R179T",3
"lib2","SARS-CoV-2","TCTTAATGCACTAGGT",1,0.72,NA,NA,NA,NA,NA,NA,"stop","S19Q K87*",2
"lib2","SARS-CoV-2","TCTTAATTATCTGACT",2,0.51,NA,NA,NA,NA,NA,NA,"stop","V103* R127W",2
"lib2","SARS-CoV-2","TCTTAATTTTAACGTG",2,41.87,10.17,-0.67,0.1,2.9,1,0,">1 nonsynonymous","A105G V173N T201K",3
"lib2","SARS-CoV-2","TCTTAATTTTAAGAAA",17,133.34,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C61R D98P G117W P161I",4
"lib2","SARS-CoV-2","TCTTACAACTGAACAG",19,67.33,6,-4.84,2,1.5,1.31,0.02,">1 nonsynonymous","L5N A14T V103S P161H",4
"lib2","SARS-CoV-2","TCTTACAAGACGACAC",1,23.26,7.21,-3.62,0.5,1.5,1.01,0.06,">1 nonsynonymous","C61L G117L F134L F156L",4
"lib2","SARS-CoV-2","TCTTACAGCAGGTGGA",3,173.47,10.67,-0.16,0.04,2.92,1.07,0,">1 nonsynonymous","K48S C61R",2
"lib2","SARS-CoV-2","TCTTACAGTAATGATT",3,19.93,10.51,-0.32,0.09,2.84,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTACAGTTCTCGAG",3,49.44,6.17,-4.67,0.41,1.5,1.09,0.01,">1 nonsynonymous","Q79R N157T Y165F Y175K",4
"lib2","SARS-CoV-2","TCTTACATAACATCTA",5,117.43,10.68,-0.16,0.03,3,1.02,0,">1 nonsynonymous","F44I S200Y",2
"lib2","SARS-CoV-2","TCTTACATGTAATGAT",9,49.39,6,-4.84,2,1.61,1.19,0.01,">1 nonsynonymous","Y50S F160L G166M",3
"lib2","SARS-CoV-2","TCTTACCAATCTATAT",6,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S G101Y Y165R",3
"lib2","SARS-CoV-2","TCTTACCAATTGACCT",7,47.53,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A18H N107C E154M V180Y",4
"lib2","SARS-CoV-2","TCTTACCAGGTGAGTC",13,104.13,8.99,-1.84,0.16,1.57,1.16,0.01,">1 nonsynonymous","L5D Y35D N58W E141V",4
"lib2","SARS-CoV-2","TCTTACCCAATCACGC",7,43.26,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C6S D68A G83T D112I",4
"lib2","SARS-CoV-2","TCTTACCCATACTAAA",34,646.81,10.68,-0.16,0.03,2.93,1.06,0,"1 nonsynonymous","F134L",1
"lib2","SARS-CoV-2","TCTTACCGTCTACGTA",3,34.59,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","C49P T63D",2
"lib2","SARS-CoV-2","TCTTACCTTTTATGGC",4,52.59,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G86Y C150L",2
"lib2","SARS-CoV-2","TCTTACGTATCTATGT",10,3.06,NA,NA,NA,NA,NA,NA,"stop","G9* S113N P149N",3
"lib2","SARS-CoV-2","TCTTACGTATGCCGTT",1,6.84,9.24,-1.6,0.25,2.03,1,0.03,">1 nonsynonymous","Y21L L60S",2
"lib2","SARS-CoV-2","TCTTACGTCGCTACGC",2,2.67,NA,NA,NA,NA,NA,NA,"stop","C6F F12N G101* L122V I138S",5
"lib2","SARS-CoV-2","TCTTACTAAGTGGACC",2,0.11,NA,NA,NA,NA,NA,NA,"stop","T46* Y159L T201S",3
"lib2","SARS-CoV-2","TCTTACTAGAGACTAT",3,38.1,6,-4.84,1.97,1.5,1.13,0,">1 nonsynonymous","L95Y Y143L G152F",3
"lib2","SARS-CoV-2","TCTTACTCACGTCCTG",2,65.42,10.29,-0.55,0.06,2.89,1.07,0,">1 nonsynonymous","K26V T85L L95V",3
"lib2","SARS-CoV-2","TCTTACTCCCTAAAGC",7,113.47,10.85,0.01,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTACTCCCTATAAA",6,78.46,9.37,-1.47,0.04,2,1.01,0,">1 nonsynonymous","F47N F160L",2
"lib2","SARS-CoV-2","TCTTACTTTACAATCC",4,112.07,10.2,-0.64,0.04,2.9,1,0,">1 nonsynonymous","G83D V115S",2
"lib2","SARS-CoV-2","TCTTAGAAAGACATCG",2,52.55,10.26,-0.57,0.06,2.84,1.05,0,">1 nonsynonymous","V37R Q84E K94A",3
"lib2","SARS-CoV-2","TCTTAGAAATTGAAAG",3,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49M T55Y G83D Q168F G172R",5
"lib2","SARS-CoV-2","TCTTAGAACGGTCATT",9,58.38,10.87,0.03,0.04,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTAGAAGTTACAAC",9,205.56,10.83,0,0.04,2.94,1.07,0,">1 nonsynonymous","D97K T201S",2
"lib2","SARS-CoV-2","TCTTAGACCTTACTTT",11,159.95,10.84,0.01,0.04,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTAGATATACCTAT",3,15.74,7.97,-2.86,0.24,1.5,1.09,0.03,">1 nonsynonymous","P96N W106S T201M",3
"lib2","SARS-CoV-2","TCTTAGATGTTATCCA",2,51.33,7.81,-3.03,0.21,1.56,1.09,0.01,">1 nonsynonymous","F99H Y119R F160P",3
"lib2","SARS-CoV-2","TCTTAGCAAGTACACG",1,14.57,8.63,-2.21,0.18,1.5,1.04,0.01,">1 nonsynonymous","Y91S G166T V173A",3
"lib2","SARS-CoV-2","TCTTAGCAGCTGAAAC",2,38.47,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V11P W106V Y175G",3
"lib2","SARS-CoV-2","TCTTAGCATTGAACGT",4,6.74,6,-4.84,2,3,1.38,0.02,">1 nonsynonymous","I2M G9C A33R C49K D68A",5
"lib2","SARS-CoV-2","TCTTAGCTATAATAAT",1,47.45,10.88,0.04,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTAGCTGATGTAAG",19,200.53,10.27,-0.57,0.05,2.77,1.04,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","TCTTAGGAGAAATCCC",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V C61L Y119F P149C",4
"lib2","SARS-CoV-2","TCTTAGGTACAGACTC",9,46.07,9.6,-1.23,0.19,1.5,1.05,0.02,">1 nonsynonymous","F17V A81M",2
"lib2","SARS-CoV-2","TCTTAGTACATTCAAG",5,29.04,10.8,-0.04,0.08,2.91,1.13,0,"1 nonsynonymous","G9M",1
"lib2","SARS-CoV-2","TCTTAGTCAGGAGGTG",13,229.29,10.8,-0.04,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTATAAGTTAGACA",10,70.05,6,-4.84,2,3,1.13,0,"1 nonsynonymous","P177R",1
"lib2","SARS-CoV-2","TCTTATACTTAAGTAC",1,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6I C49F A81S D90P L95E W106K",6
"lib2","SARS-CoV-2","TCTTATACTTAGATAT",1,40.76,10.85,0.02,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTATAGACAAGTAA",4,16.18,NA,NA,NA,NA,NA,NA,"stop","F17N Y91*",2
"lib2","SARS-CoV-2","TCTTATATAAAAAGGG",8,91.88,7.58,-3.25,0.19,1.5,1.1,0.01,">1 nonsynonymous","P96T D98Y N157D K198G",4
"lib2","SARS-CoV-2","TCTTATATCTCTTCAT",5,155.45,10.8,-0.04,0.04,2.89,1.13,0,"1 nonsynonymous","L122T",1
"lib2","SARS-CoV-2","TCTTATCACACCGGTA",3,107.94,10.01,-0.83,0.05,2.69,1.05,0,">1 nonsynonymous","A105V T148L",2
"lib2","SARS-CoV-2","TCTTATCAGCCAACAG",2,9.36,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A14T T46N L57R N118C G152V",5
"lib2","SARS-CoV-2","TCTTATCCACTTACTT",3,0.67,NA,NA,NA,NA,NA,NA,"stop","F134C T140* C158N Y165A",4
"lib2","SARS-CoV-2","TCTTATCCAGAACTAC",4,0.58,NA,NA,NA,NA,NA,NA,"stop","A89C R179*",2
"lib2","SARS-CoV-2","TCTTATCCGACTGTAC",6,1.7,NA,NA,NA,NA,NA,NA,"stop","Y35* F99D Q163L Q168R",4
"lib2","SARS-CoV-2","TCTTATCTGAGACCAA",5,52.65,10.47,-0.37,0.04,2.93,1.03,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","TCTTATGACCAACGAT",3,96.45,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K48M Y159G G174R",3
"lib2","SARS-CoV-2","TCTTATGAGTACGCGT",3,38.88,7.88,-2.96,0.15,1.5,1.04,0.01,">1 nonsynonymous","Y35S S129R N157R",3
"lib2","SARS-CoV-2","TCTTATGCTTCTTTAT",7,131.28,10.75,-0.08,0.04,2.96,1.04,0,"1 nonsynonymous","R27A",1
"lib2","SARS-CoV-2","TCTTATGTGTATTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D C61L W106N Y165F",4
"lib2","SARS-CoV-2","TCTTATTATCTCTGTT",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9M A105L",2
"lib2","SARS-CoV-2","TCTTATTCAAGGTTTT",6,124.38,10.22,-0.62,0.04,2.91,1.01,0,">1 nonsynonymous","E10W T55Q",2
"lib2","SARS-CoV-2","TCTTATTCAGACAACA",4,91.31,10.76,-0.08,0.04,2.85,1.11,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TCTTATTGCGCCCAAG",2,15.05,10.66,-0.18,0.1,2.74,1.26,0,">1 nonsynonymous","S41H T46V",2
"lib2","SARS-CoV-2","TCTTATTTCATTTAGC",6,0.22,NA,NA,NA,NA,NA,NA,"stop","L60R A145E S164M V181T E186*",5
"lib2","SARS-CoV-2","TCTTCAAAAACTACGT",3,111.42,10.14,-0.7,0.07,2.72,1,0,">1 nonsynonymous","L38H P197L",2
"lib2","SARS-CoV-2","TCTTCAAAACATGATT",9,64.5,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20L C49G T55P P133A",4
"lib2","SARS-CoV-2","TCTTCAACAAATACTA",2,15.72,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A89H C150Y",2
"lib2","SARS-CoV-2","TCTTCAACGACTACGA",1,11.76,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","V37M N157I R179S",3
"lib2","SARS-CoV-2","TCTTCAACGGGCAATG",11,93.88,9.12,-1.71,0.05,1.78,1.11,0,">1 nonsynonymous","L38R P169R",2
"lib2","SARS-CoV-2","TCTTCAAGAAATTGTA",5,91.7,9.84,-1,0.06,2.58,1.15,0,"1 nonsynonymous","V173E",1
"lib2","SARS-CoV-2","TCTTCAAGGTAACAAT",1,20.85,9.88,-0.96,0.1,2.45,1.09,0.01,">1 nonsynonymous","F44V K132W",2
"lib2","SARS-CoV-2","TCTTCAAGGTATTCTC",8,151.15,10.27,-0.57,0.02,2.91,1.05,0,">1 nonsynonymous","K94C V173E T201R",3
"lib2","SARS-CoV-2","TCTTCAATCAATTCCA",9,163.56,10.12,-0.72,0.09,2.44,1.09,0,">1 nonsynonymous","D34G T55I",2
"lib2","SARS-CoV-2","TCTTCACAAACGACTC",3,17.22,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","N92R C150I",2
"lib2","SARS-CoV-2","TCTTCACGACATAAAT",7,197.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V11G F99L G101L I142F N157S Q176H",6
"lib2","SARS-CoV-2","TCTTCACGATGTAGTA",7,70.02,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","G101C F126P",2
"lib2","SARS-CoV-2","TCTTCACTAACGTACT",2,42.91,6,-4.84,0.99,1.5,1.14,0.02,">1 nonsynonymous","G51I Q84T F167M K199S",4
"lib2","SARS-CoV-2","TCTTCACTATATGACC",3,12.57,6,-4.84,2,3,1.03,0,">1 nonsynonymous","G101L S113D L122T K128T",4
"lib2","SARS-CoV-2","TCTTCAGAATTATGCT",7,0.14,NA,NA,NA,NA,NA,NA,"stop","S113R N120D Q144* V173T",4
"lib2","SARS-CoV-2","TCTTCAGAGATTTCAT",4,5.62,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","TCTTCAGTATGAGGCC",6,35.05,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F99G G117A",2
"lib2","SARS-CoV-2","TCTTCAGTGTTCAAAA",4,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y C61Y P96L",3
"lib2","SARS-CoV-2","TCTTCATAATACCTGT",3,68.28,9.63,-1.2,0.09,2.14,1.09,0,">1 nonsynonymous","R27P D97M S139T S147N Q176M T201L",6
"lib2","SARS-CoV-2","TCTTCATGAATGGTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35M G51P T100* R179D",4
"lib2","SARS-CoV-2","TCTTCATGATATCATT",4,26.78,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N13L F62T N107V T148M Q168T",5
"lib2","SARS-CoV-2","TCTTCATTACACAGCA",9,87.13,6.05,-4.78,0.68,1.5,1.17,0.01,">1 nonsynonymous","I28R S43T G146Y",3
"lib2","SARS-CoV-2","TCTTCATTCATTTCTA",3,34.14,8.27,-2.57,0.26,1.95,1.27,0.03,"1 nonsynonymous","D112M",1
"lib2","SARS-CoV-2","TCTTCCAAACTTAATT",1,53.62,10.94,0.1,0.05,2.99,1.03,0,">1 nonsynonymous","L5I D98N T201W",3
"lib2","SARS-CoV-2","TCTTCCAATCCTCCGA",10,5.11,NA,NA,NA,NA,NA,NA,"stop","L95I L122* S129F C150H",4
"lib2","SARS-CoV-2","TCTTCCACACCAATGA",15,235.9,10.59,-0.24,0.02,2.92,1.09,0,">1 nonsynonymous","S41L Q163T",2
"lib2","SARS-CoV-2","TCTTCCACCCACACCC",7,0,NA,NA,NA,NA,NA,NA,"stop","G9* G86N N107K D137A N151I",5
"lib2","SARS-CoV-2","TCTTCCAGCAATTAAA",4,3.2,NA,NA,NA,NA,NA,NA,"stop","K26L G83*",2
"lib2","SARS-CoV-2","TCTTCCATATCGCAAA",5,43.06,6.01,-4.83,0.72,1.5,1.08,0.01,">1 nonsynonymous","Y93R P161Q",2
"lib2","SARS-CoV-2","TCTTCCCAAAGTTTTT",5,48.13,6,-4.84,2,1.5,1.36,0.04,">1 nonsynonymous","C6A P96M C150Y T201S",4
"lib2","SARS-CoV-2","TCTTCCCACTTGTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I I80M Y93L V153D",4
"lib2","SARS-CoV-2","TCTTCCCCGATACGAG",2,24.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C6Y T46I D97S D137R",4
"lib2","SARS-CoV-2","TCTTCCCGTAAATAAC",4,0.99,NA,NA,NA,NA,NA,NA,"stop","N130* Y165D",2
"lib2","SARS-CoV-2","TCTTCCCTTGCCCGAG",3,44.95,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V32E S69L P96I",3
"lib2","SARS-CoV-2","TCTTCCGCTGGTGAAC",1,4.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F70V V173S",2
"lib2","SARS-CoV-2","TCTTCCGCTTCTCACA",3,50.75,10.75,-0.08,0.04,3,1.01,0,"1 nonsynonymous","V32F",1
"lib2","SARS-CoV-2","TCTTCCTAATAAACAT",1,11.92,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A18I Y39N F47I G146S",4
"lib2","SARS-CoV-2","TCTTCGACAAATACGT",1,29.73,9.87,-0.96,0.07,2.61,1.1,0,">1 nonsynonymous","T15C K132M I138M",3
"lib2","SARS-CoV-2","TCTTCGACACTCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31D Q144P P177C",3
"lib2","SARS-CoV-2","TCTTCGATGACTAAAC",3,36.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C49V K56W G174R C195S",4
"lib2","SARS-CoV-2","TCTTCGCAATAAACTT",4,64.6,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N40Y Y50P C61S D68L K198A",5
"lib2","SARS-CoV-2","TCTTCGCATGAACCCG",4,7.98,6,-4.84,2,3,1.29,0.05,">1 nonsynonymous","D98V V103M Y119T",3
"lib2","SARS-CoV-2","TCTTCGCGGTCAAATG",18,55.86,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","N40M P54K L60D Q84M P96S C102G L122R Q163S S200V",9
"lib2","SARS-CoV-2","TCTTCGGGGAATAAGT",4,12.24,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12G F99N K199I",3
"lib2","SARS-CoV-2","TCTTCGGTAGACCATT",19,179.03,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14L G86Y Y91L N107P K128L",5
"lib2","SARS-CoV-2","TCTTCGTATTCTGAAC",4,27.89,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","R16T L57A A89V A145T P177L",5
"lib2","SARS-CoV-2","TCTTCTAACTATGTCA",1,5.21,10.26,-0.57,0.07,3,1.02,0,">1 nonsynonymous","F17Y I28L S129H",3
"lib2","SARS-CoV-2","TCTTCTACAAGGAACG",12,202.71,10,-0.83,0.07,2.54,1.05,0,">1 nonsynonymous","L5Y D90I",2
"lib2","SARS-CoV-2","TCTTCTCAAACAACCC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","L38* S43L",2
"lib2","SARS-CoV-2","TCTTCTCACTTTGGAC",3,20.75,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","Y39P V103S",2
"lib2","SARS-CoV-2","TCTTCTCCTGACATAA",3,14.19,6.74,-4.1,0.76,1.5,1.02,0.06,">1 nonsynonymous","N30I P96G G116S P161Y A192S",5
"lib2","SARS-CoV-2","TCTTCTCGGACCCGAG",2,43.85,10.81,-0.03,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTCTGATCTTGTCA",2,42.45,8.27,-2.56,0.23,1.89,1.07,0.02,">1 nonsynonymous","R27A G74M Y119P",3
"lib2","SARS-CoV-2","TCTTCTGCCAGAGATA",3,13.25,7.34,-3.49,0.39,2.14,1.09,0.04,">1 nonsynonymous","I2S N24P Y91I I138A",4
"lib2","SARS-CoV-2","TCTTCTGGAAAAACGT",1,23.11,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","D90P N107I N120W",3
"lib2","SARS-CoV-2","TCTTCTGGAAACCTTC",1,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R D90S D112S G146K P149K C195F",6
"lib2","SARS-CoV-2","TCTTCTGTCGGGCATA",4,45.39,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A81F N107H K128S",3
"lib2","SARS-CoV-2","TCTTCTTTGTGCACCC",5,34.67,8.48,-2.36,0.28,1.5,1,0.03,">1 nonsynonymous","F12Q K87S S184L",3
"lib2","SARS-CoV-2","TCTTGAAAGGATATAC",8,41.15,8.82,-2.02,0.16,1.57,1.14,0.01,">1 nonsynonymous","V52I L183Y S200Y",3
"lib2","SARS-CoV-2","TCTTGAAAGGCCCCAA",4,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R F62I T100V R136T E154V",5
"lib2","SARS-CoV-2","TCTTGAACAAATCTGT",10,13.4,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","N1L N13P S41V N107A",4
"lib2","SARS-CoV-2","TCTTGAATATCAACCT",13,131.25,6,-4.84,0.96,1.5,1.22,0.01,">1 nonsynonymous","F12L L95T T170K",3
"lib2","SARS-CoV-2","TCTTGAATATGCCTTA",2,0.08,NA,NA,NA,NA,NA,NA,"stop","G9* L162P",2
"lib2","SARS-CoV-2","TCTTGAATCCCTGCTT",2,21.71,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y93A N130T Q163F Y175I",4
"lib2","SARS-CoV-2","TCTTGACACAACCTAT",2,25.97,9.95,-0.88,0.12,2.18,1.17,0.01,"1 nonsynonymous","W106T",1
"lib2","SARS-CoV-2","TCTTGACTAAACGTTA",7,25.73,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G101Y Y119W",2
"lib2","SARS-CoV-2","TCTTGAGAACTTACTT",6,52.76,10.79,-0.05,0.04,2.88,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTGAGACAGAGAGT",2,8.71,6.24,-4.59,2,1.5,1.1,0.01,">1 nonsynonymous","A14V G146A C158P",3
"lib2","SARS-CoV-2","TCTTGAGAGACAGTCC",1,6,6,-4.84,2,3,1,0,"1 nonsynonymous","C102R",1
"lib2","SARS-CoV-2","TCTTGAGCATCATATG",1,0.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27M V181N",2
"lib2","SARS-CoV-2","TCTTGAGGATAACTTG",8,133.96,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50I C150Y P177E",3
"lib2","SARS-CoV-2","TCTTGAGGTCTTACTG",3,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q P96L P161M",3
"lib2","SARS-CoV-2","TCTTGAGTTTCCGTCT",9,154.07,10.83,0,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTGATCCAGAAGCG",5,67.78,10.43,-0.4,0.06,2.75,1.17,0,">1 nonsynonymous","D90T S139T",2
"lib2","SARS-CoV-2","TCTTGATCTGCACTAA",4,48.39,6,-4.84,2,3,1.2,0,">1 nonsynonymous","V37I F99N",2
"lib2","SARS-CoV-2","TCTTGATGGTTTCATA",5,116.93,10.44,-0.4,0.05,2.88,1.12,0,"1 nonsynonymous","S164L",1
"lib2","SARS-CoV-2","TCTTGCAAGTAGGAAA",2,16.6,10.73,-0.11,0.09,2.86,1.12,0,">1 nonsynonymous","S36E T55F I138S",3
"lib2","SARS-CoV-2","TCTTGCACGAATCGCC",3,47.42,9.86,-0.97,0.11,2.72,1,0,">1 nonsynonymous","S43N K56G F62C G83S F134S",5
"lib2","SARS-CoV-2","TCTTGCAGATACAATT",9,199.28,8.34,-2.5,0.12,2.43,1.04,0.01,">1 nonsynonymous","Q176V K199T",2
"lib2","SARS-CoV-2","TCTTGCATAGCCAGGA",1,6.69,8.68,-2.16,0.49,1.5,1.05,0.06,">1 nonsynonymous","G9A R25W",2
"lib2","SARS-CoV-2","TCTTGCCGATGTGTAT",3,6.9,6.76,-4.08,0.89,1.5,1.19,0.01,">1 nonsynonymous","D34M Q176L",2
"lib2","SARS-CoV-2","TCTTGCCGTGAGGTAA",6,30.53,9.82,-1.01,0.14,2.18,1,0.01,"1 nonsynonymous","N13I",1
"lib2","SARS-CoV-2","TCTTGCCTCACTGTTG",1,102.89,6.29,-4.54,0.51,1.5,1.18,0.01,">1 nonsynonymous","R25K R73P",2
"lib2","SARS-CoV-2","TCTTGCGTCTGTAAAC",4,1.01,NA,NA,NA,NA,NA,NA,"stop","Y35* P96G",2
"lib2","SARS-CoV-2","TCTTGCTGTAAAACTT",10,39.23,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T3N A33M R73Q L95S L111S G155C",6
"lib2","SARS-CoV-2","TCTTGGAAACCGCACG",4,33.44,10.35,-0.48,0.06,2.92,1.08,0,">1 nonsynonymous","Q84N D90A T100M",3
"lib2","SARS-CoV-2","TCTTGGATCACAGAAA",5,203.84,9.01,-1.82,0.06,2.45,1.06,0,"1 nonsynonymous","R73I",1
"lib2","SARS-CoV-2","TCTTGGCAAAAATACC",9,26.38,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L57R D98E G117C K128V E154Y",5
"lib2","SARS-CoV-2","TCTTGGCTAATTTAGA",4,242.32,9.97,-0.86,0.05,2.76,1.03,0,">1 nonsynonymous","D98L V173G T201C",3
"lib2","SARS-CoV-2","TCTTGGGCAGAACATC",2,7.36,9.2,-1.64,0.13,2.11,1,0.01,">1 nonsynonymous","V77K N120H V153S",3
"lib2","SARS-CoV-2","TCTTGGGTCACCAAAC",3,27.14,10.84,0,0.06,2.95,1.09,0,"1 nonsynonymous","V32H",1
"lib2","SARS-CoV-2","TCTTGTACTATCTAAT",9,257.63,10.73,-0.11,0.03,2.99,1.02,0,">1 nonsynonymous","G9K Y39M",2
"lib2","SARS-CoV-2","TCTTGTCCAAAAGTCA",1,6.75,7.76,-3.07,0.22,2.08,1,0.01,">1 nonsynonymous","V11Y P177S",2
"lib2","SARS-CoV-2","TCTTGTCTGAACCATT",5,138.33,9.77,-1.07,0.07,2.01,1.07,0,">1 nonsynonymous","S36L F44S E141K",3
"lib2","SARS-CoV-2","TCTTGTCTTATTTGTT",2,11.4,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T15I C61R P96L N130A",4
"lib2","SARS-CoV-2","TCTTTAAAAAGACGAC",16,94.78,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","L60F G101P Q144P F160N",4
"lib2","SARS-CoV-2","TCTTTAAAACTGATCC",2,15.98,9.89,-0.94,0.1,2.6,1.14,0.01,">1 nonsynonymous","Y35A Q84S L95M",3
"lib2","SARS-CoV-2","TCTTTAAAAGATAATC",1,30.57,10.75,-0.09,0.08,2.9,1.13,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","TCTTTAAAATGAGTCT",5,115.78,10.87,0.03,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTTAAAATTTTAAA",7,54.82,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","P7Q Y66W N107M L125D Q168C",5
"lib2","SARS-CoV-2","TCTTTAACAACCCAGC",7,30.28,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F12V I28G S69G N157I",4
"lib2","SARS-CoV-2","TCTTTAACTACACTTT",10,104.45,6,-4.84,1.59,2.26,1.13,0,"1 nonsynonymous","L162P",1
"lib2","SARS-CoV-2","TCTTTAAGACCTAAAT",7,4.58,NA,NA,NA,NA,NA,NA,"stop","T15S F62* F99S A105R K128V E135K",6
"lib2","SARS-CoV-2","TCTTTAAGATTTATAG",8,31.65,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S45W L95C Y143W A190L",4
"lib2","SARS-CoV-2","TCTTTAAGCATAAGCA",2,5.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19L D98S L131Y",3
"lib2","SARS-CoV-2","TCTTTAAGCTACTACG",9,7.64,6.16,-4.67,2,1.5,1.37,0.05,">1 nonsynonymous","E10M C31N G101S L183R",4
"lib2","SARS-CoV-2","TCTTTACAATACTAAG",4,81.5,9.29,-1.55,0.03,2.93,1.07,0,">1 nonsynonymous","I2L A81T L125N",3
"lib2","SARS-CoV-2","TCTTTACACAAGTATA",4,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33I L95Q",2
"lib2","SARS-CoV-2","TCTTTACACCATGATA",1,8.5,6,-4.84,2,1.5,1.05,0.01,"1 nonsynonymous","V180S",1
"lib2","SARS-CoV-2","TCTTTACGATTGCTAA",2,28.94,8.88,-1.96,0.14,1.85,1.13,0.01,">1 nonsynonymous","Y35S N58F K87C N120V S164T",5
"lib2","SARS-CoV-2","TCTTTACTATTATTAA",10,85.68,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V77H A81E L111V G152S F160S",5
"lib2","SARS-CoV-2","TCTTTACTTACAAGTT",17,333.41,8.25,-2.59,0.13,2.65,1.09,0.01,">1 nonsynonymous","L5V Y119F F126T",3
"lib2","SARS-CoV-2","TCTTTAGAAAACGATT",11,87.84,9.15,-1.69,0.09,1.68,1.07,0,">1 nonsynonymous","F8A T100Y K114R",3
"lib2","SARS-CoV-2","TCTTTAGAAAATAAAT",1,8.12,9.09,-1.74,0.3,1.53,1.14,0.05,">1 nonsynonymous","T63K P96I",2
"lib2","SARS-CoV-2","TCTTTAGACCGCGCCT",6,652.27,9.58,-1.26,0.08,2.81,1.08,0,">1 nonsynonymous","N120T T201G",2
"lib2","SARS-CoV-2","TCTTTAGACTGTGTGG",2,19.82,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N58S P82Y T148V",3
"lib2","SARS-CoV-2","TCTTTAGCACGCTCAA",1,19.22,6.35,-4.49,0.83,1.5,1.22,0.04,">1 nonsynonymous","T63Y A81H N107P G155M",4
"lib2","SARS-CoV-2","TCTTTAGGCGACTCGG",2,15.59,10.15,-0.69,0.16,2.37,1.05,0.01,">1 nonsynonymous","A33N W106Y",2
"lib2","SARS-CoV-2","TCTTTAGTTAAGAATG",6,29.85,8.85,-1.98,0.09,1.91,1.06,0,">1 nonsynonymous","A33V A81S N130M G155L",4
"lib2","SARS-CoV-2","TCTTTATAAAGAGGGA",2,2.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12W S19F P54V Y123R N130W S147T S200F",7
"lib2","SARS-CoV-2","TCTTTATACAAGACGC",12,2.81,NA,NA,NA,NA,NA,NA,"stop","F62Y L122* F156W",3
"lib2","SARS-CoV-2","TCTTTATAGTAAGCAT",1,17.95,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9R F44L C49L A105Y G117I P149F S200F",7
"lib2","SARS-CoV-2","TCTTTATCTCATAAAA",4,5.16,NA,NA,NA,NA,NA,NA,"stop","P7E S41P V71N V115* Q144N",5
"lib2","SARS-CoV-2","TCTTTATGACCTCCCT",3,65.36,9.54,-1.29,0.09,1.95,1.1,0,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","TCTTTATTGTTGATCT",1,6.64,9.23,-1.61,0.2,1.87,1.01,0.02,"1 nonsynonymous","Y50L",1
"lib2","SARS-CoV-2","TCTTTCACACAGGCAT",6,38.25,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2W K87S D97T F167I",4
"lib2","SARS-CoV-2","TCTTTCACGACATTGC",10,67.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S45L D90S A105T Y159D",4
"lib2","SARS-CoV-2","TCTTTCACGACGATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V G74L L183T",3
"lib2","SARS-CoV-2","TCTTTCACTGTAACTA",2,29.5,10.85,0.01,0.07,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTTCATAATTTTAA",6,50.99,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C6S I88R Y159F A192R G196W",5
"lib2","SARS-CoV-2","TCTTTCCAAAAACGAA",9,135.91,8.79,-2.05,0.05,2.82,1.08,0,">1 nonsynonymous","I88V A145T F156S",3
"lib2","SARS-CoV-2","TCTTTCCAAAGGCATT",12,222.56,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","D34R R73Q A89F D137P P177L",5
"lib2","SARS-CoV-2","TCTTTCCACAAACCTA",2,35.44,10.45,-0.39,0.13,2.84,1.15,0.01,"1 nonsynonymous","A81W",1
"lib2","SARS-CoV-2","TCTTTCCACCTGAAAA",1,71.08,9.44,-1.39,0.13,2.64,1.09,0.01,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TCTTTCCTTTACTCGC",3,63.31,10.19,-0.65,0.1,2.31,1.02,0.01,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TCTTTCGAACTGCTTA",5,158.09,10.85,0.01,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TCTTTCGTCGGTACCA",10,0.25,NA,NA,NA,NA,NA,NA,"stop","F62Y F160S R179G T201*",4
"lib2","SARS-CoV-2","TCTTTCTACCTACTAT",4,20.81,6.67,-4.17,0.38,1.5,1.08,0.03,">1 nonsynonymous","W106N T148R G174K F185L",4
"lib2","SARS-CoV-2","TCTTTCTCTTTTAACA",1,21.22,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D75I N92V",2
"lib2","SARS-CoV-2","TCTTTCTTACGCATGC",16,343.59,10.18,-0.66,0.03,2.75,1.05,0,">1 nonsynonymous","A67L Q163K V180M",3
"lib2","SARS-CoV-2","TCTTTGACACCCTCTG",14,3.58,NA,NA,NA,NA,NA,NA,"stop","A89T Y119*",2
"lib2","SARS-CoV-2","TCTTTGAGTGAGGCCA",9,182.23,10.39,-0.44,0.05,2.9,1.11,0,">1 nonsynonymous","Y35W G155L",2
"lib2","SARS-CoV-2","TCTTTGAGTTCAATAA",18,294.21,9.08,-1.76,0.06,2.7,1.06,0,">1 nonsynonymous","R16G A42I R73A",3
"lib2","SARS-CoV-2","TCTTTGATGCCAACGG",7,21.7,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S29V Y50C",2
"lib2","SARS-CoV-2","TCTTTGCTTGGGGAAA",2,82.61,10.55,-0.29,0.05,2.93,1.09,0,">1 nonsynonymous","S41Y T140Y T201S",3
"lib2","SARS-CoV-2","TCTTTGGACGTCCACA",4,17.05,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P7F Y35H A67Y Y91I E141V",5
"lib2","SARS-CoV-2","TCTTTGGATTACAGGC",1,60.15,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1I Y21K D68M A105K",4
"lib2","SARS-CoV-2","TCTTTGTACCATTTCA",5,80.4,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","S36I D68R A105F",3
"lib2","SARS-CoV-2","TCTTTGTATTAAGCCA",2,11.87,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13G I72H Y91H N107Y V115K E141Y",6
"lib2","SARS-CoV-2","TCTTTGTGGGATTTAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31R K56A F62V D90Y P197R",5
"lib2","SARS-CoV-2","TCTTTTAATTCGACCA",2,0.95,NA,NA,NA,NA,NA,NA,"stop","I28* F44L F99G",3
"lib2","SARS-CoV-2","TCTTTTCATGTATAAT",3,0.5,NA,NA,NA,NA,NA,NA,"stop","T85S G117T G166*",3
"lib2","SARS-CoV-2","TCTTTTCCCGATTGAA",4,90.1,10.84,0.01,0.06,2.95,1.08,0,">1 nonsynonymous","Y35F N151Q",2
"lib2","SARS-CoV-2","TCTTTTCTATTAGATC",4,19.15,7.76,-3.08,0.21,1.75,1.1,0.01,">1 nonsynonymous","F134T I142K",2
"lib2","SARS-CoV-2","TCTTTTGATCGGGTTT",1,0,NA,NA,NA,NA,NA,NA,"stop","T3L F99H C150* N171L",4
"lib2","SARS-CoV-2","TCTTTTGGGAAATGAA",6,18.94,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V77L K94S T100P Y119T",4
"lib2","SARS-CoV-2","TCTTTTGTTATTATTG",3,21.6,6.81,-4.02,0.39,1.5,1.05,0.03,">1 nonsynonymous","R16I Y21K A190T C195S",4
"lib2","SARS-CoV-2","TCTTTTGTTGCTAATA",3,13.56,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","R16M T55K Q84N S113W",4
"lib2","SARS-CoV-2","TCTTTTTACCAAATGT",6,48.36,10.61,-0.23,0.07,2.88,1.02,0,">1 nonsynonymous","Y39A I138G",2
"lib2","SARS-CoV-2","TCTTTTTGACCAATAT",1,35.96,10.82,-0.01,0.09,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAAAAAACTGTTG",2,46.45,10.72,-0.12,0.06,2.93,1.05,0,"1 nonsynonymous","T100S",1
"lib2","SARS-CoV-2","TGAAAAAAAGAAACAA",4,3.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85S V103Q L187Y",3
"lib2","SARS-CoV-2","TGAAAAAAATATTGTA",18,610.64,10.84,0.01,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAAAAATCAAATT",3,27.31,10.67,-0.16,0.07,2.87,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAAAACAAAGTCA",10,208.48,10.83,-0.01,0.04,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAAAAAACAGAACGG",2,30.4,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","A33L G51V G117W",3
"lib2","SARS-CoV-2","TGAAAAAACCTTATTG",5,1.04,NA,NA,NA,NA,NA,NA,"stop","F47K K87* Y93P",3
"lib2","SARS-CoV-2","TGAAAAAACTAATATT",15,2.66,NA,NA,NA,NA,NA,NA,"stop","F12G I72R E141*",3
"lib2","SARS-CoV-2","TGAAAAAACTCTTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53I S69G E135G",3
"lib2","SARS-CoV-2","TGAAAAAAGAATTGTG",1,0.51,NA,NA,NA,NA,NA,NA,"stop","D59* A81T L122P G166L",4
"lib2","SARS-CoV-2","TGAAAAAAGATTACTA",3,44.68,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","I88V Y93N N171L",3
"lib2","SARS-CoV-2","TGAAAAAAGCCAAAAT",3,17.52,10.27,-0.57,0.08,2.82,1,0,">1 nonsynonymous","N4L N40Y",2
"lib2","SARS-CoV-2","TGAAAAAATCACCAAA",4,88.56,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T55I R73F",2
"lib2","SARS-CoV-2","TGAAAAAATGATAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","A105* T201C",2
"lib2","SARS-CoV-2","TGAAAAAATGATCCTT",3,12.44,8.97,-1.87,0.22,1.93,1.05,0.01,">1 nonsynonymous","I2L V20L T201H",3
"lib2","SARS-CoV-2","TGAAAAACAAAATCTA",6,163.26,7.04,-3.8,0.18,1.65,1.13,0.01,">1 nonsynonymous","T55K N64S V65L C158L P197V",5
"lib2","SARS-CoV-2","TGAAAAACATAATGAA",1,9.41,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","V20R F99I P149C",3
"lib2","SARS-CoV-2","TGAAAAACCGAATCTT",11,2.91,NA,NA,NA,NA,NA,NA,"stop","D98* T201A",2
"lib2","SARS-CoV-2","TGAAAAACGGACACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","F47S F99K Q176* P191R",4
"lib2","SARS-CoV-2","TGAAAAACTGCTGCCT",13,141.75,10.84,0,0.05,2.88,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAAAAACTTGATACA",2,15.87,9.56,-1.27,0.16,1.88,1.16,0.01,">1 nonsynonymous","Y123V E135V",2
"lib2","SARS-CoV-2","TGAAAAAGAGCACTGT",4,40.4,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A14S L57K Y93V I142M T201S",5
"lib2","SARS-CoV-2","TGAAAAAGCCAACAGG",4,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98E V173P V182G",3
"lib2","SARS-CoV-2","TGAAAAAGGAACGTAA",10,36.01,7.62,-3.22,0.5,1.5,1,0.08,">1 nonsynonymous","F8N N13C S129H T170R",4
"lib2","SARS-CoV-2","TGAAAAAGTACCTTCG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","A14H K48* A105L I142S",4
"lib2","SARS-CoV-2","TGAAAAAGTAGGTTCT",1,23.29,6,-4.84,0.44,3,1.05,0,">1 nonsynonymous","Y35V A42R D137R G172S",4
"lib2","SARS-CoV-2","TGAAAAAGTTACACCT",6,110.8,10.63,-0.2,0.03,2.99,1.02,0,">1 nonsynonymous","F8L N171S",2
"lib2","SARS-CoV-2","TGAAAAATAAAAAATG",4,10.27,6,-4.84,1.68,3,1.12,0.02,">1 nonsynonymous","V20T Y93C I142H",3
"lib2","SARS-CoV-2","TGAAAAATAAGCCGTT",2,5.16,NA,NA,NA,NA,NA,NA,"stop","L5M C61R D90R G101* L187W",5
"lib2","SARS-CoV-2","TGAAAAATAAGGCATG",7,0.54,NA,NA,NA,NA,NA,NA,"stop","G116*",1
"lib2","SARS-CoV-2","TGAAAAATACAAGCTA",8,123.89,10.81,-0.03,0.05,2.95,1.08,0,">1 nonsynonymous","Q144N H189S",2
"lib2","SARS-CoV-2","TGAAAAATATATCTTA",3,57.78,10.66,-0.17,0.07,2.79,1.17,0,">1 nonsynonymous","I88V D97N",2
"lib2","SARS-CoV-2","TGAAAAATTCTAATCG",10,47.09,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C61T G74L Q84A N92A P149C",5
"lib2","SARS-CoV-2","TGAAAACAAATCTTAT",5,54.38,8.3,-2.53,0.1,2,1.1,0.01,">1 nonsynonymous","C6L T170L",2
"lib2","SARS-CoV-2","TGAAAACACCACGTAT",3,78.2,10.81,-0.03,0.06,2.82,1.14,0,">1 nonsynonymous","G51S F160R N171T",3
"lib2","SARS-CoV-2","TGAAAACACGGTAAAC",1,5.09,10.09,-0.75,0.17,2.75,1.23,0.01,">1 nonsynonymous","N4L F62Y V153C",3
"lib2","SARS-CoV-2","TGAAAACAGTATCTTT",5,47.26,6.88,-3.96,0.3,1.5,1.14,0.02,">1 nonsynonymous","P7V R78F G166L T201I",4
"lib2","SARS-CoV-2","TGAAAACATGCATTAA",5,55.67,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P96D G146I C158G S184I",4
"lib2","SARS-CoV-2","TGAAAACCACGGGCTG",13,84.92,10.85,0.01,0.07,2.88,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAACCATGGTTCC",4,46.04,10.78,-0.06,0.03,2.91,1.08,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","TGAAAACCTTACCTAG",8,39.24,6.1,-4.74,0.82,1.5,1.14,0.02,">1 nonsynonymous","L60A K87H D137F N151M",4
"lib2","SARS-CoV-2","TGAAAACGCAAGGCTA",1,19.35,6,-4.84,2,3,1.19,0.02,">1 nonsynonymous","G86S V153H F167V Q176F",4
"lib2","SARS-CoV-2","TGAAAACGTAATTAAA",17,284.04,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","C49V T55D E76L",3
"lib2","SARS-CoV-2","TGAAAACGTTTGTAAC",1,16.71,10.78,-0.05,0.08,2.92,1.08,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","TGAAAAGAAAACCGTT",7,94.5,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S53V Y119V Y175R",3
"lib2","SARS-CoV-2","TGAAAAGAATGGTCAG",6,42.81,9.11,-1.72,0.07,2.88,1.09,0,">1 nonsynonymous","P54A G117I N151D",3
"lib2","SARS-CoV-2","TGAAAAGAATTTTGTG",3,21.8,8.33,-2.51,0.1,2.87,1.16,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","TGAAAAGAGATCAACA",4,57.65,9.6,-1.23,0.11,2.34,1.04,0,">1 nonsynonymous","A42S A105G E141C",3
"lib2","SARS-CoV-2","TGAAAAGAGATGTTAA",1,67.34,9.62,-1.22,0.08,2.5,1.1,0,">1 nonsynonymous","K48A P161S",2
"lib2","SARS-CoV-2","TGAAAAGATGTATTAA",3,22.4,6,-4.84,2,3,1.02,0,">1 nonsynonymous","G101R Y165L Q176R",3
"lib2","SARS-CoV-2","TGAAAAGCCGGAAATC",3,31.64,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","W23R S29T D97S N107S Y119S",5
"lib2","SARS-CoV-2","TGAAAAGGAGCGCTTT",3,47.59,10.79,-0.04,0.03,2.92,1.08,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","TGAAAAGGCCAGTGGT",2,42.65,10.21,-0.62,0.06,2.66,1.04,0,">1 nonsynonymous","V37M K94S",2
"lib2","SARS-CoV-2","TGAAAAGTAATCAACC",2,35.48,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A33T G86L G155I",3
"lib2","SARS-CoV-2","TGAAAAGTACTTGCTA",1,50.35,10.28,-0.56,0.07,2.76,1.01,0,">1 nonsynonymous","S41E T63L D97E E141A",4
"lib2","SARS-CoV-2","TGAAAAGTGAACCGAT",10,102.12,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V20E G152I Q168N L187A",4
"lib2","SARS-CoV-2","TGAAAATACAACGAAG",2,39.01,10.72,-0.12,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAATACTAAGTTG",3,2.4,NA,NA,NA,NA,NA,NA,"stop","L57* D90M",2
"lib2","SARS-CoV-2","TGAAAATAGAATTAAA",5,97.96,10.8,-0.04,0.04,2.9,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAATATCAGTCTT",1,12.34,6,-4.84,2,3,1.02,0,">1 nonsynonymous","L60F A89D C150G",3
"lib2","SARS-CoV-2","TGAAAATATCGCCAGT",11,31.6,6.76,-4.08,0.36,1.5,1.12,0.03,">1 nonsynonymous","S43N C61L A105D P149R",4
"lib2","SARS-CoV-2","TGAAAATCCAAACCGT",9,81.49,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S43M F70N E76I T85R",4
"lib2","SARS-CoV-2","TGAAAATCCAATTAAA",3,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V K26G S36I F44D K56P A81Q Y159F G174E",8
"lib2","SARS-CoV-2","TGAAAATGCTGCCGCG",17,354.38,10.19,-0.65,0.02,2.88,1.05,0,">1 nonsynonymous","K87H F99L",2
"lib2","SARS-CoV-2","TGAAAATGTTAACCTA",1,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L F44H G51P",3
"lib2","SARS-CoV-2","TGAAAATTGATTAAAT",10,114.74,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","A105D T140K Y175P",3
"lib2","SARS-CoV-2","TGAAAATTGGACGTAC",7,101.71,10.74,-0.09,0.04,2.93,1.08,0,">1 nonsynonymous","I2N D59R",2
"lib2","SARS-CoV-2","TGAAAATTTTCGTGCG",4,0.04,NA,NA,NA,NA,NA,NA,"stop","V32E C49Y T100H S139*",4
"lib2","SARS-CoV-2","TGAAAATTTTCTTGTA",9,10.71,6.12,-4.71,1.28,1.5,1.24,0.04,">1 nonsynonymous","G9E W106S N118I",3
"lib2","SARS-CoV-2","TGAAACAAAAGGCTCT",7,68.64,9.54,-1.3,0.07,2.59,1.04,0,">1 nonsynonymous","N40R N107Q N130I",3
"lib2","SARS-CoV-2","TGAAACAAATCATCAG",4,17.53,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","A22S L38A G83H Y121S Q176A",5
"lib2","SARS-CoV-2","TGAAACAAATGGTAAG",2,19.08,8.27,-2.57,0.14,1.5,1.07,0.01,">1 nonsynonymous","W23A S29M",2
"lib2","SARS-CoV-2","TGAAACAACCGATTGT",2,11.01,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S139P C150L",2
"lib2","SARS-CoV-2","TGAAACAAGTCGTCCT",5,0.75,NA,NA,NA,NA,NA,NA,"stop","P82* C150W G155E T201H",4
"lib2","SARS-CoV-2","TGAAACAATAATAATT",4,0.69,NA,NA,NA,NA,NA,NA,"stop","E10* G51Y R78G Y91I D98N",5
"lib2","SARS-CoV-2","TGAAACAATTTTAATA",2,28.56,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6G L131S Q176L",3
"lib2","SARS-CoV-2","TGAAACACAGACTGTT",3,10.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S129G T140E",2
"lib2","SARS-CoV-2","TGAAACACCAATTTGC",6,46.66,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P96F N151S",2
"lib2","SARS-CoV-2","TGAAACACGTGTCATA",3,31.37,9.45,-1.39,0.1,2.62,1.07,0,">1 nonsynonymous","C61S Y121S K199L",3
"lib2","SARS-CoV-2","TGAAACAGATGAACTG",3,16.83,6,-4.84,1.36,2.48,1.06,0,">1 nonsynonymous","C6F C61S V65T K87L Y123I",5
"lib2","SARS-CoV-2","TGAAACAGGGGTAAAT",4,76.03,8.98,-1.86,0.08,2.15,1.08,0,">1 nonsynonymous","E10S D98G S129L F156L",4
"lib2","SARS-CoV-2","TGAAACAGGTCATATG",6,0,NA,NA,NA,NA,NA,NA,"stop","L38A D59* T100R",3
"lib2","SARS-CoV-2","TGAAACAGGTTAATGG",7,117.17,8.8,-2.04,0.07,2.67,1.07,0,">1 nonsynonymous","I2S D98P N110M Y119V",4
"lib2","SARS-CoV-2","TGAAACAGTAAACATT",11,67.98,6.69,-4.14,0.53,1.5,1.15,0.05,">1 nonsynonymous","C49R R127E",2
"lib2","SARS-CoV-2","TGAAACATGCGAAGTA",2,22.28,10.31,-0.52,0.1,2.75,1.03,0,"1 nonsynonymous","E135Y",1
"lib2","SARS-CoV-2","TGAAACATTAAAATCA",3,129.74,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","G51D L122W G172D",3
"lib2","SARS-CoV-2","TGAAACATTAACACTG",10,236.01,10.74,-0.1,0.04,2.86,1.08,0,"1 nonsynonymous","K114S",1
"lib2","SARS-CoV-2","TGAAACATTTAATATA",9,114.99,9.75,-1.09,0.08,2.14,1.01,0,">1 nonsynonymous","S41P L60A N109I K199D",4
"lib2","SARS-CoV-2","TGAAACATTTGGTAAG",1,12.12,9.05,-1.79,0.16,1.73,1.1,0.01,">1 nonsynonymous","K56C N64G Y123T",3
"lib2","SARS-CoV-2","TGAAACCAAGCAGGAT",5,53.37,10.51,-0.32,0.04,2.95,1.06,0,">1 nonsynonymous","S36D F47Y N64S",3
"lib2","SARS-CoV-2","TGAAACCCCTTAAACG",1,100.07,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G9I R25V Q84M W106R",4
"lib2","SARS-CoV-2","TGAAACCCGCCTTAGT",12,67.91,6,-4.84,2,3,1.2,0,">1 nonsynonymous","K94R W106C N171R Y175S",4
"lib2","SARS-CoV-2","TGAAACCCGGGCAAAT",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L K128W P149C",3
"lib2","SARS-CoV-2","TGAAACCCGGTCGCAG",5,140.1,10.69,-0.14,0.03,2.98,1.03,0,"1 nonsynonymous","F62H",1
"lib2","SARS-CoV-2","TGAAACCGTACACAAA",3,33,10.77,-0.07,0.04,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAACCTAAAGCCAT",1,8.67,NA,NA,NA,NA,NA,0.27,"1 nonsynonymous","G86Y",1
"lib2","SARS-CoV-2","TGAAACCTGCACACAT",7,141.59,9.96,-0.88,0.03,2.87,1.07,0,">1 nonsynonymous","V37L K56T W106F G174D",4
"lib2","SARS-CoV-2","TGAAACGAACCAAGTG",3,63.32,6,-4.84,0.8,1.5,1.14,0.01,">1 nonsynonymous","R27W P133R C158L V173L",4
"lib2","SARS-CoV-2","TGAAACGCAAAATAGT",9,28.65,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","A89N V103Y P161L T201V",4
"lib2","SARS-CoV-2","TGAAACGGTTGTCATA",5,44.05,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L57H G155S G172S",3
"lib2","SARS-CoV-2","TGAAACGTAATAACTC",1,4.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L R25S C49S C61K A67S K87D F134L",7
"lib2","SARS-CoV-2","TGAAACGTCTCAAATC",4,30.51,10.64,-0.2,0.06,2.95,1.01,0,">1 nonsynonymous","F8Y K48M",2
"lib2","SARS-CoV-2","TGAAACGTTCCAACCA",4,87.79,10.67,-0.17,0.04,2.96,1.05,0,">1 nonsynonymous","E141G G196W",2
"lib2","SARS-CoV-2","TGAAACTAACCAGTGA",1,6.52,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","Q79R S129L Y159L S184D",4
"lib2","SARS-CoV-2","TGAAACTAAGACGACT",1,1.28,NA,NA,NA,NA,NA,NA,"stop","N1T Y66I P82* Y123S",4
"lib2","SARS-CoV-2","TGAAACTACAGTAGAA",16,205.98,10.76,-0.08,0.04,2.97,1.03,0,">1 nonsynonymous","T100H K132R",2
"lib2","SARS-CoV-2","TGAAACTAGAATCACA",2,2.33,NA,NA,NA,NA,NA,NA,"stop","G101*",1
"lib2","SARS-CoV-2","TGAAACTCAATGTTCG",9,134.37,9.98,-0.85,0.08,2.32,1.03,0,">1 nonsynonymous","N30M K94A T201G",3
"lib2","SARS-CoV-2","TGAAACTCACCTAAAA",19,87.86,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I88F F99H N107Y D112K",4
"lib2","SARS-CoV-2","TGAAACTCGCGATACT",15,212.7,9.96,-0.88,0.05,2.74,1.06,0,">1 nonsynonymous","S45H D59E F134L G155S",4
"lib2","SARS-CoV-2","TGAAACTTATTTCTAC",11,62.61,6.1,-4.74,1.09,1.5,1.21,0.03,">1 nonsynonymous","Y66M D90L Y165P",3
"lib2","SARS-CoV-2","TGAAACTTGTCAGTGA",8,32.96,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F99Q N120D P149F",3
"lib2","SARS-CoV-2","TGAAAGAAAAATAGAT",2,66.22,10.76,-0.08,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAGAAACATGGCA",11,65.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17Q A33P L60P F126S G166L",5
"lib2","SARS-CoV-2","TGAAAGAAACTCAGAA",5,31.39,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G101R Y175G",2
"lib2","SARS-CoV-2","TGAAAGAAGATTTATA",9,146.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L5H S45A L60H G172N",4
"lib2","SARS-CoV-2","TGAAAGAAGGACTGTA",3,11.33,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F99N K198M",2
"lib2","SARS-CoV-2","TGAAAGAATGTCCCCA",8,2.2,NA,NA,NA,NA,NA,NA,"stop","A33* L122V F134Y",3
"lib2","SARS-CoV-2","TGAAAGAATGTTTGAC",3,2.81,NA,NA,NA,NA,NA,NA,"stop","P54R N151* P177C",3
"lib2","SARS-CoV-2","TGAAAGACAATAAAAA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V71C",1
"lib2","SARS-CoV-2","TGAAAGACAGGGTGAC",5,75.71,9.16,-1.68,0.04,2.86,1.09,0,">1 nonsynonymous","P149L E154F",2
"lib2","SARS-CoV-2","TGAAAGACCTGAGGAT",6,99.36,10.77,-0.06,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAGACGAAGCAAC",2,31.32,10.63,-0.2,0.04,2.96,1.05,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","TGAAAGACGATACTCT",1,25.97,9.3,-1.54,0.22,2.14,1.1,0.02,">1 nonsynonymous","N13H D90M L125S S184A",4
"lib2","SARS-CoV-2","TGAAAGAGATGTTGGC",7,120.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F44M A89T R179Y",3
"lib2","SARS-CoV-2","TGAAAGAGCACCTTAT",9,1.66,NA,NA,NA,NA,NA,NA,"stop","N30* L122W Y143L Y165W C195S",5
"lib2","SARS-CoV-2","TGAAAGAGGATGAACC",1,97.41,9.59,-1.25,0.08,2.46,1.04,0,">1 nonsynonymous","W106M G174P",2
"lib2","SARS-CoV-2","TGAAAGATACTAAACG",4,28.26,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A89E Y93H D112K",3
"lib2","SARS-CoV-2","TGAAAGATACTCCCTT",8,179.03,10.76,-0.07,0.03,2.89,1.11,0,"1 nonsynonymous","R78H",1
"lib2","SARS-CoV-2","TGAAAGATGAAATAAT",6,0.51,NA,NA,NA,NA,NA,NA,"stop","V77* D90I V103*",3
"lib2","SARS-CoV-2","TGAAAGATGATGGACT",3,26.62,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S36R G51P L57E I88Y",4
"lib2","SARS-CoV-2","TGAAAGCAATTTTCAG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","S36* D59L P149D",3
"lib2","SARS-CoV-2","TGAAAGCACAGAGGGC",4,134.61,10.39,-0.45,0.06,2.94,1.04,0,">1 nonsynonymous","S53P L122S G155D",3
"lib2","SARS-CoV-2","TGAAAGCACCGACAGC",1,12.08,10.37,-0.47,0.21,1.87,1.09,0.04,">1 nonsynonymous","D68K Y91P S113L",3
"lib2","SARS-CoV-2","TGAAAGCCAACAAGAA",3,57.4,9.32,-1.52,0.06,2.06,1.09,0,">1 nonsynonymous","E10L G116L F160I",3
"lib2","SARS-CoV-2","TGAAAGCCGGATATAA",1,0.02,NA,NA,NA,NA,NA,NA,"stop","P96* K114N S184* K198*",4
"lib2","SARS-CoV-2","TGAAAGCCGTATAAAT",3,18.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I80W Y121M E135F",3
"lib2","SARS-CoV-2","TGAAAGCGACAAATGA",5,139.6,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S19F Q84E V180L",3
"lib2","SARS-CoV-2","TGAAAGCGATTAATCC",1,10.3,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","Y35I G86Y Y175A",3
"lib2","SARS-CoV-2","TGAAAGCGCAGTTTTA",9,1.32,NA,NA,NA,NA,NA,NA,"stop","G51K K94Y S200*",3
"lib2","SARS-CoV-2","TGAAAGCTCCCTACAC",4,11.36,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C49R A81M K128S",3
"lib2","SARS-CoV-2","TGAAAGCTGACTCAAG",7,38.85,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N4P S43W P82Y K87R N107F",5
"lib2","SARS-CoV-2","TGAAAGCTTACGCAAA",1,12.19,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","V37Y G51L V103R V173M",4
"lib2","SARS-CoV-2","TGAAAGGAAAGCTAGA",8,0.05,NA,NA,NA,NA,NA,NA,"stop","N58R Y123* L125G S184M",4
"lib2","SARS-CoV-2","TGAAAGGACGTCTAAC",6,70.67,9.17,-1.66,0.04,3,1.04,0,">1 nonsynonymous","G166I T201G",2
"lib2","SARS-CoV-2","TGAAAGGCAAGGAAAG",4,10.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35H A42L D112G L131R P149V",5
"lib2","SARS-CoV-2","TGAAAGGCATAATAGC",3,59.07,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P149I P177D",2
"lib2","SARS-CoV-2","TGAAAGGCATAGCGTA",7,37.12,9.44,-1.39,0.34,1.5,1,0.03,">1 nonsynonymous","T3P Y35T N171K",3
"lib2","SARS-CoV-2","TGAAAGTAAAAAAGAA",1,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86E P161T",2
"lib2","SARS-CoV-2","TGAAAGTATAAAACAC",6,18.46,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","A14F F70I V182R T201L",4
"lib2","SARS-CoV-2","TGAAAGTATATGAATC",2,23.73,10.82,-0.02,0.13,2.79,1.02,0.01,"1 nonsynonymous","N40D",1
"lib2","SARS-CoV-2","TGAAAGTCGCCGCCCT",6,29.66,6,-4.84,2,1.5,1.32,0.04,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","TGAAAGTGAATGTGCT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","V20E N58S Q84I L95*",4
"lib2","SARS-CoV-2","TGAAAGTGATAGTACC",3,50.48,10.47,-0.36,0.06,3,1,0,">1 nonsynonymous","R27F A42T",2
"lib2","SARS-CoV-2","TGAAAGTGCCGAGAAG",23,283.27,10.6,-0.24,0.02,2.88,1.08,0,">1 nonsynonymous","A42P K114F",2
"lib2","SARS-CoV-2","TGAAAGTGGTTTGTTA",4,30.08,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","N13Y F44Y A145K C150S",4
"lib2","SARS-CoV-2","TGAAAGTTACCTAGGC",1,0.87,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGAAAGTTCCCAAGTC",1,6.15,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","C49P",1
"lib2","SARS-CoV-2","TGAAATAAAAAAAGAC",11,139.9,10.87,0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAATAAAAACCAAG",3,0.76,NA,NA,NA,NA,NA,NA,"stop","L5V S43* D68P",3
"lib2","SARS-CoV-2","TGAAATAAAATATGAC",12,68.33,8.62,-2.21,0.34,1.5,1,0.06,">1 nonsynonymous","P82L W106V",2
"lib2","SARS-CoV-2","TGAAATAACATTGCTA",12,109.69,10.49,-0.35,0.03,2.9,1.04,0,"1 nonsynonymous","E135S",1
"lib2","SARS-CoV-2","TGAAATAAGAGACTTA",11,2.11,NA,NA,NA,NA,NA,NA,"stop","A18* R27E Y35* N64P K114A F134A",6
"lib2","SARS-CoV-2","TGAAATAAGAGTCCGG",12,148.64,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","K48V Y121R F134C T148A",4
"lib2","SARS-CoV-2","TGAAATAAGTTTAGGC",6,81.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P161L V173M",2
"lib2","SARS-CoV-2","TGAAATACAATATAAA",5,65.9,10.88,0.04,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAATACCAAATAAA",1,28.55,10.81,-0.03,0.06,2.83,1.18,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","TGAAATACTTGGTATG",2,47.93,9.83,-1.01,0.1,2.19,1.05,0,">1 nonsynonymous","I2V Y35V C61S D90I",4
"lib2","SARS-CoV-2","TGAAATAGAACACACA",9,137.24,9.7,-1.13,0.1,1.99,1.12,0,"1 nonsynonymous","L38E",1
"lib2","SARS-CoV-2","TGAAATAGCTTTTGAA",3,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P T55S G155R L183D",4
"lib2","SARS-CoV-2","TGAAATAGGACCCTAT",1,6.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7F L38V L60M Y91L N110I Y178N",6
"lib2","SARS-CoV-2","TGAAATAGTGCGCATA",4,65,8.81,-2.03,0.08,2.93,1.08,0,">1 nonsynonymous","E141G G166Y",2
"lib2","SARS-CoV-2","TGAAATAGTTACTCTA",6,109.14,10.11,-0.72,0.05,2.67,1.03,0,">1 nonsynonymous","G9W T63W",2
"lib2","SARS-CoV-2","TGAAATATAAAGCGGA",19,348.75,10.85,0.02,0.06,2.95,1.07,0,"1 nonsynonymous","T100V",1
"lib2","SARS-CoV-2","TGAAATATTATCTATA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66T T100K D112R N130Y G155T",5
"lib2","SARS-CoV-2","TGAAATCAAAAGGTAG",4,44.95,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41A C49N T55W Q144F G174R",5
"lib2","SARS-CoV-2","TGAAATCAAATAAATG",12,187.99,10.81,-0.03,0.05,2.95,1.07,0,"1 nonsynonymous","K132S",1
"lib2","SARS-CoV-2","TGAAATCAACAAAAAC",3,29.06,7.06,-3.78,0.21,1.56,1.15,0.01,"1 nonsynonymous","C150L",1
"lib2","SARS-CoV-2","TGAAATCAACACATAA",4,58.02,9.2,-1.63,0.25,1.5,1,0.03,">1 nonsynonymous","K48P V65I L122A P149N",4
"lib2","SARS-CoV-2","TGAAATCAACTTATCC",6,68.99,7.25,-3.59,0.25,1.5,1.2,0.02,">1 nonsynonymous","D97F N107K D112L Y178N R179M",5
"lib2","SARS-CoV-2","TGAAATCACGCGATTT",4,19.25,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","P54A D98C A105L L183N",4
"lib2","SARS-CoV-2","TGAAATCACGTTTGAA",8,100.94,10.56,-0.27,0.03,2.92,1.06,0,">1 nonsynonymous","I2V T55L D98V",3
"lib2","SARS-CoV-2","TGAAATCACTAGTATA",8,155.72,10.41,-0.43,0.04,2.89,1.06,0,">1 nonsynonymous","N4W K132E",2
"lib2","SARS-CoV-2","TGAAATCAGAAACACA",10,35.82,8.94,-1.9,0.29,1.5,1.01,0.05,">1 nonsynonymous","F8G K56R G83Q V173Y P197L",5
"lib2","SARS-CoV-2","TGAAATCATTTAGACT",4,82.18,8.38,-2.45,0.12,1.92,1.12,0.01,">1 nonsynonymous","Y91M I142N",2
"lib2","SARS-CoV-2","TGAAATCCACACCACA",2,36.68,10.62,-0.21,0.06,2.87,1.16,0,"1 nonsynonymous","H189L",1
"lib2","SARS-CoV-2","TGAAATCCGAACTGCA",4,45.52,10.69,-0.14,0.05,2.9,1.11,0,"1 nonsynonymous","N110L",1
"lib2","SARS-CoV-2","TGAAATCCTCAGCATG",9,31.55,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","P7S C61I V103Y V115M K128R",5
"lib2","SARS-CoV-2","TGAAATCCTGTTGGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V C102N R124V R136T",4
"lib2","SARS-CoV-2","TGAAATCGAAACATTA",6,15.3,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F8L N13K K128S G155V P161L",5
"lib2","SARS-CoV-2","TGAAATCGAATAAATA",2,13.02,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","R25G P96F F134W V181G",4
"lib2","SARS-CoV-2","TGAAATCTCAAACATT",5,40.64,6,-4.84,2,3,1.19,0,">1 nonsynonymous","L38N Y121W E141L E154L R179M",5
"lib2","SARS-CoV-2","TGAAATCTGAGTTACT",1,37.41,6,-4.84,2,1.5,1.25,0.06,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","TGAAATGAACTTCGAA",10,165.05,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V11H R27K T46N Y119Q P161D P197F",6
"lib2","SARS-CoV-2","TGAAATGAAGAAACGC",1,7.07,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T15K D34G D68R K199P",4
"lib2","SARS-CoV-2","TGAAATGAATTGTGAA",3,49.02,10.54,-0.29,0.06,2.97,1.06,0,">1 nonsynonymous","I2T F44L",2
"lib2","SARS-CoV-2","TGAAATGAGCAGCATG",1,9.67,10.53,-0.31,0.17,2.79,1.23,0.01,">1 nonsynonymous","L5F V37I K114E S129K",4
"lib2","SARS-CoV-2","TGAAATGAGCGCAACG",3,11.43,6.17,-4.67,0.95,3,1.27,0.03,"1 nonsynonymous","L183P",1
"lib2","SARS-CoV-2","TGAAATGATACTGTTA",5,47.66,10.65,-0.18,0.03,2.97,1.01,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","TGAAATGATATTATGA",9,46.16,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N24C A105L T170K",3
"lib2","SARS-CoV-2","TGAAATGCCCAAATGT",4,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S A89S W106P Q176G",4
"lib2","SARS-CoV-2","TGAAATGCTTAGAACT",2,5.18,6,-4.84,2,3,1.08,0,">1 nonsynonymous","K94T N120G",2
"lib2","SARS-CoV-2","TGAAATGTAAGCTACA",2,0.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65G F99Y I142G",3
"lib2","SARS-CoV-2","TGAAATTAAAATATAA",1,16.71,8.02,-2.82,0.23,1.55,1.07,0.02,">1 nonsynonymous","F99L N107E S129T",3
"lib2","SARS-CoV-2","TGAAATTAACTTGTTA",1,17.32,10.51,-0.33,0.07,3,1.03,0,"1 nonsynonymous","T15H",1
"lib2","SARS-CoV-2","TGAAATTAATCCTAGG",3,17.52,10.11,-0.73,0.15,2.65,1.21,0.01,">1 nonsynonymous","N4E Y35C",2
"lib2","SARS-CoV-2","TGAAATTACACTAAAG",5,14.14,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G9V F70P S147V",3
"lib2","SARS-CoV-2","TGAAATTATCTATTAA",5,0.42,NA,NA,NA,NA,NA,NA,"stop","T55Y G166* P191T",3
"lib2","SARS-CoV-2","TGAAATTATTACCCTT",3,51.69,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N130F Y143S F167P Q176E",4
"lib2","SARS-CoV-2","TGAAATTCAAACACAG",7,31.35,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N4S E10A G51N S69K R78D L95Q F167I",7
"lib2","SARS-CoV-2","TGAAATTCATGCTGGT",1,16.16,9.9,-0.93,0.11,2.89,1.02,0.01,">1 nonsynonymous","A33W D97L Y165H",3
"lib2","SARS-CoV-2","TGAAATTCGATCAATG",3,14.58,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","A14E L122I R127A L162Q",4
"lib2","SARS-CoV-2","TGAAATTCTTATTAAG",16,61.09,6.4,-4.44,0.67,1.5,1.27,0.03,">1 nonsynonymous","C6V N13L Q84S L95A I142A P177I",6
"lib2","SARS-CoV-2","TGAAATTGCCGATAAT",2,30.97,9.19,-1.65,0.21,1.82,1.09,0.02,">1 nonsynonymous","L5V Y165R",2
"lib2","SARS-CoV-2","TGAAATTGGGTCCGAC",3,24.86,10.86,0.02,0.09,2.99,1.06,0,">1 nonsynonymous","S29Q Y35L",2
"lib2","SARS-CoV-2","TGAAATTTAAGGTTAT",4,69.34,6,-4.84,1.49,1.5,1.09,0.01,">1 nonsynonymous","D59L L122R S139C Y143R G166Y",5
"lib2","SARS-CoV-2","TGAAATTTACGGATTA",7,0.08,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","TGAAATTTACTTGTCA",2,8.9,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","G9V S29F D90G Y119S S184D",5
"lib2","SARS-CoV-2","TGAAATTTCGTATCGC",2,1.16,NA,NA,NA,NA,NA,NA,"stop","E76* Y165M A190F",3
"lib2","SARS-CoV-2","TGAAATTTCTAAACCA",4,2.94,NA,NA,NA,NA,NA,NA,"stop","A81T F167* T201*",3
"lib2","SARS-CoV-2","TGAAATTTTACCAGAT",5,64.91,10.14,-0.7,0.05,2.94,1.05,0,">1 nonsynonymous","C61I K87S",2
"lib2","SARS-CoV-2","TGAACAAAAAATCCAC",19,209.58,6.45,-4.39,0.43,1.5,1.15,0.02,">1 nonsynonymous","S41L D59E G146M N151S F185Y",5
"lib2","SARS-CoV-2","TGAACAAAACACCACG",5,0.49,NA,NA,NA,NA,NA,NA,"stop","Y35R S43* K56V K94A",4
"lib2","SARS-CoV-2","TGAACAAACAAGGCAA",4,21,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F17E A42D P82Y S108C F160T",5
"lib2","SARS-CoV-2","TGAACAAAGTTCGCGA",6,0.64,NA,NA,NA,NA,NA,NA,"stop","E76K E135*",2
"lib2","SARS-CoV-2","TGAACAAATACGTTTC",10,106.33,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8I A22T D90S Y175M",4
"lib2","SARS-CoV-2","TGAACAAATACTAGTC",4,26.96,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F12C D68K T100Y S147V S184L",5
"lib2","SARS-CoV-2","TGAACAAATTTCTGCT",1,1.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N30L F44W F62Q W106D Q144G P149T P177R",8
"lib2","SARS-CoV-2","TGAACAACATAAGGCT",4,39.65,9.58,-1.26,0.13,1.9,1.07,0.01,">1 nonsynonymous","N4H R25Q T148S",3
"lib2","SARS-CoV-2","TGAACAACTGACATAT",7,50.16,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","C6E L38R V65H L95T D112Y",5
"lib2","SARS-CoV-2","TGAACAAGAGCACAAA",1,2.8,NA,NA,NA,NA,NA,NA,"stop","G101* K132* T201C",3
"lib2","SARS-CoV-2","TGAACAAGTCATTAGT",5,104.52,6.1,-4.74,0.73,1.5,1.21,0.01,">1 nonsynonymous","W23T R25T K87L W106C I138S P149N",6
"lib2","SARS-CoV-2","TGAACAAGTGTCTCTA",2,89.62,10.11,-0.72,0.04,2.88,1.06,0,">1 nonsynonymous","P54L Q144Y",2
"lib2","SARS-CoV-2","TGAACAATACCACAAA",6,37.13,8.74,-2.1,0.07,2.88,1.03,0,">1 nonsynonymous","N13L Y119N",2
"lib2","SARS-CoV-2","TGAACAATGGCTTGGT",3,96.77,10.86,0.03,0.05,2.94,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACAATTCTAGGGC",11,334.12,10.85,0.01,0.04,2.92,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAACACAAAACGATA",17,215.67,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1L D97L E141V Y175G",4
"lib2","SARS-CoV-2","TGAACACAAATGATAG",3,15.18,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S45R Y93R G116K P149M",4
"lib2","SARS-CoV-2","TGAACACAACCTAGCG",10,126.41,9.62,-1.22,0.03,2.91,1.05,0,">1 nonsynonymous","K48E N118G",2
"lib2","SARS-CoV-2","TGAACACAACGCTCTC",2,71.74,9.89,-0.94,0.05,2.93,1.05,0,"1 nonsynonymous","N118G",1
"lib2","SARS-CoV-2","TGAACACAACTACCAT",8,160.22,10.55,-0.28,0.04,2.84,1.11,0,"1 nonsynonymous","D98M",1
"lib2","SARS-CoV-2","TGAACACAAGTGCATA",3,10.91,6,-4.84,2,3,1.29,0.02,">1 nonsynonymous","E10F R124L R179E",3
"lib2","SARS-CoV-2","TGAACACACGACTCGT",2,1.29,NA,NA,NA,NA,NA,NA,"stop","A42* C61A Y93N N107T",4
"lib2","SARS-CoV-2","TGAACACACTATAACC",4,88.13,9.04,-1.79,0.12,1.5,1.08,0.01,">1 nonsynonymous","R16L A81V V115L S147F E154V T201S",6
"lib2","SARS-CoV-2","TGAACACACTGGAGCA",2,31.53,10.92,0.08,0.09,2.79,1.08,0.01,">1 nonsynonymous","S129G T201R",2
"lib2","SARS-CoV-2","TGAACACAGTAGTATA",5,69.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y93F T148L Q176L",3
"lib2","SARS-CoV-2","TGAACACATAGCCTTT",4,140.03,10.85,0.02,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACACCACTACCTT",1,24.08,9.72,-1.11,0.11,2.07,1.06,0.01,">1 nonsynonymous","T46C R136V K198R",3
"lib2","SARS-CoV-2","TGAACACCTACGACTT",11,84.73,7.01,-3.82,0.28,1.5,1.07,0.02,">1 nonsynonymous","R124S P149T T201I",3
"lib2","SARS-CoV-2","TGAACACGACAAACCC",2,11.56,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G9H I28T Y35P D59A N107Q N118I",6
"lib2","SARS-CoV-2","TGAACACGCGCCTAAC",1,2.18,NA,NA,NA,NA,NA,NA,"stop","I2K N64C D90H G155*",4
"lib2","SARS-CoV-2","TGAACACGGTCAAAGC",1,0.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S C61W D90E T201H",4
"lib2","SARS-CoV-2","TGAACACGTACGCTAT",1,45.38,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A105F C158D K199Y",3
"lib2","SARS-CoV-2","TGAACACGTATGCGGT",11,6.67,9.61,-1.22,0.38,2.27,1.27,0.07,">1 nonsynonymous","I28G S113V L162Y T170I",4
"lib2","SARS-CoV-2","TGAACACGTCCAAAGG",2,60.84,10,-0.83,0.1,2.04,1.11,0,"1 nonsynonymous","D137S",1
"lib2","SARS-CoV-2","TGAACACTTATGCTGA",7,56.9,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","D90P S139L G146Y N151R",4
"lib2","SARS-CoV-2","TGAACACTTCCCCATA",7,79.62,7.18,-3.66,0.17,1.68,1.15,0.01,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","TGAACAGAGGAATCTC",3,62.02,10.66,-0.18,0.05,2.92,1.1,0,">1 nonsynonymous","D98S G174N",2
"lib2","SARS-CoV-2","TGAACAGAGTAACACG",10,130.6,10.68,-0.16,0.04,2.9,1.1,0,"1 nonsynonymous","K114L",1
"lib2","SARS-CoV-2","TGAACAGATTAATGAG",4,43.28,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","A89D G116V",2
"lib2","SARS-CoV-2","TGAACAGCACTACCAC",3,71.41,9.97,-0.87,0.06,2.71,1.07,0,">1 nonsynonymous","N40L T55C A192H",3
"lib2","SARS-CoV-2","TGAACAGCTGTAAAAC",13,257.2,9.59,-1.24,0.04,2.88,1.09,0,"1 nonsynonymous","T170N",1
"lib2","SARS-CoV-2","TGAACAGGCTTCACTG",9,6.46,NA,NA,NA,NA,NA,NA,"stop","A81M L122Q I138S Y175*",4
"lib2","SARS-CoV-2","TGAACAGGGTGTATAC",4,31.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S19K Y35S F44L A145D N171L",5
"lib2","SARS-CoV-2","TGAACATAAGCACTTT",1,42.34,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","A105T Y165K",2
"lib2","SARS-CoV-2","TGAACATACAAGTCTT",1,0.77,NA,NA,NA,NA,NA,NA,"stop","S45K T100R K128*",3
"lib2","SARS-CoV-2","TGAACATAGGGTTTAA",12,64.71,6,-4.84,0.87,1.5,1.17,0.01,">1 nonsynonymous","D59F D90V Y175G V181R",4
"lib2","SARS-CoV-2","TGAACATAGTGAAAGG",2,15.9,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","N4K F44W I72N Y119K",4
"lib2","SARS-CoV-2","TGAACATATACGGAGC",2,69.52,9.63,-1.2,0.05,2.94,1.04,0,">1 nonsynonymous","S53D D59A Y66I N171L",4
"lib2","SARS-CoV-2","TGAACATATGGCTCAG",5,19.84,6.12,-4.72,1.62,1.5,1.25,0.04,">1 nonsynonymous","D98S Y123D",2
"lib2","SARS-CoV-2","TGAACATCAAAACCAT",8,65.58,9.97,-0.87,0.07,2.06,1.01,0,">1 nonsynonymous","A14E W106L",2
"lib2","SARS-CoV-2","TGAACATCAAATTAAA",9,126.97,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S36A G117R C150S",3
"lib2","SARS-CoV-2","TGAACATCAGAAATCG",9,57.03,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","K94Y N118I",2
"lib2","SARS-CoV-2","TGAACATGACCAATAC",14,190.11,10.83,-0.01,0.05,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAACATTAAGGGAAA",2,7.06,10.59,-0.25,0.09,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACCAAAACAGAAA",4,32.74,8.36,-2.48,0.12,1.92,1.12,0.01,">1 nonsynonymous","V37F V52R N118F",3
"lib2","SARS-CoV-2","TGAACCAAAAGGCAAA",1,6.42,NA,NA,NA,NA,NA,0.39,">1 nonsynonymous","V32K A42C D75P G83E",4
"lib2","SARS-CoV-2","TGAACCAACATATCAT",5,6.94,NA,NA,NA,NA,NA,NA,"stop","K87* P169R",2
"lib2","SARS-CoV-2","TGAACCAACCAACCTT",8,227.44,10.44,-0.4,0.04,2.9,1.05,0,">1 nonsynonymous","F44L T55R T100K T201K",4
"lib2","SARS-CoV-2","TGAACCAAGAACTGGG",5,31.72,10.84,0,0.04,2.92,1.08,0,">1 nonsynonymous","R27L T201I",2
"lib2","SARS-CoV-2","TGAACCAAGACAAATT",2,54.03,10.72,-0.12,0.05,2.93,1.09,0,">1 nonsynonymous","N1Q L122W T201S",3
"lib2","SARS-CoV-2","TGAACCAATGTCCTTA",7,0.07,NA,NA,NA,NA,NA,NA,"stop","S41R N64* G86T L95N",4
"lib2","SARS-CoV-2","TGAACCACAGAACCTA",1,29.46,9.43,-1.4,0.13,1.99,1.07,0.01,">1 nonsynonymous","I2N F12Q",2
"lib2","SARS-CoV-2","TGAACCAGAAAATAGA",16,84.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S69W K94Q N118L",3
"lib2","SARS-CoV-2","TGAACCAGAAATGAAC",4,106.75,8.47,-2.37,0.11,2.97,1.04,0,">1 nonsynonymous","F126R F156R K198R",3
"lib2","SARS-CoV-2","TGAACCAGACAGGTTA",1,18.45,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","N13G Y39G Y66G K87T N107R T148D Q176I",7
"lib2","SARS-CoV-2","TGAACCAGCTCACCGG",2,71.77,10.78,-0.05,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACCAGTTCGTGCA",6,28.08,7.9,-2.94,0.21,1.56,1.03,0.01,">1 nonsynonymous","N107V P169V",2
"lib2","SARS-CoV-2","TGAACCATATAAATTG",1,35.99,10.61,-0.22,0.07,2.73,1.23,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TGAACCATTAAGCTCA",6,53.07,6,-4.84,0.88,3,1.2,0,">1 nonsynonymous","G9A N110M E135H R179G",4
"lib2","SARS-CoV-2","TGAACCCAAGTTTTTC",4,32.7,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","I2T S29V S36E C49T G83P Q163P K199I",7
"lib2","SARS-CoV-2","TGAACCCACTTAAATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52D R136D P149K Q163A N171D",5
"lib2","SARS-CoV-2","TGAACCCAGAGGCCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9L T15* T170A",3
"lib2","SARS-CoV-2","TGAACCCAGGTACTTG",3,28.39,7.24,-3.6,0.3,1.5,1.15,0.02,">1 nonsynonymous","G9K Y21R",2
"lib2","SARS-CoV-2","TGAACCCATGCCCGCC",7,327.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L95A C158S",2
"lib2","SARS-CoV-2","TGAACCCATGGAATCT",11,73.13,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L95N S129R Y143S P191S",4
"lib2","SARS-CoV-2","TGAACCCCAAGTCCAT",4,45.8,6.22,-4.62,0.64,1.5,1.14,0.02,">1 nonsynonymous","F8S V181N G196T",3
"lib2","SARS-CoV-2","TGAACCGAAAATAACG",3,20.26,6,-4.84,2,3,1.17,0.02,">1 nonsynonymous","I88K Y175D",2
"lib2","SARS-CoV-2","TGAACCGAAGTCTTCC",2,25.39,10.48,-0.36,0.04,2.9,1.05,0,">1 nonsynonymous","D97L F134A",2
"lib2","SARS-CoV-2","TGAACCGAATCTGGGT",18,300.97,8.7,-2.14,0.1,1.62,1.09,0,">1 nonsynonymous","Y91V Y178T",2
"lib2","SARS-CoV-2","TGAACCGAGAAGAAAG",2,39.63,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","S29A V103R T201P",3
"lib2","SARS-CoV-2","TGAACCGCATACTAAA",11,183.3,10.72,-0.11,0.04,2.89,1.13,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TGAACCGCCTTTATTT",4,91.05,10.68,-0.16,0.03,2.94,1.08,0,">1 nonsynonymous","N58R N130H",2
"lib2","SARS-CoV-2","TGAACCGGAAACGTCA",5,121.42,9.26,-1.57,0.05,2.93,1.11,0,">1 nonsynonymous","L122N Q168I",2
"lib2","SARS-CoV-2","TGAACCGGGTAGGATC",8,66.66,10.96,0.12,0.06,2.9,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACCGTGTTTTATT",7,50.96,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C6T A18V C31D Y143M F167R",5
"lib2","SARS-CoV-2","TGAACCTAAGCGTTAT",5,46.09,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","V173S V180F",2
"lib2","SARS-CoV-2","TGAACCTACGCGACCA",1,16.46,10.97,0.13,0.11,2.88,1.09,0,"1 nonsynonymous","T55P",1
"lib2","SARS-CoV-2","TGAACCTAGAAGTTTG",7,4.86,NA,NA,NA,NA,NA,NA,"stop","R16K D59* D90Y A192M T201H",5
"lib2","SARS-CoV-2","TGAACCTATCGTGAAA",5,3.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R T15G S41P Q84H I138Y C150F",6
"lib2","SARS-CoV-2","TGAACCTATTAGGACG",10,36.56,6,-4.84,2,3,1.28,0,">1 nonsynonymous","S41F L60V V77S Y119S K199Y",5
"lib2","SARS-CoV-2","TGAACCTCATACCATA",2,19.91,6,-4.84,1.27,3,1.17,0.01,">1 nonsynonymous","R73L Y91T P133S Q176C",4
"lib2","SARS-CoV-2","TGAACCTCCGCAGGCC",7,79.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T46Q T55S V65Q V71G N92V",5
"lib2","SARS-CoV-2","TGAACCTGTGCCTATA",3,4.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Q S41T P96E W106K",4
"lib2","SARS-CoV-2","TGAACGAACGAATAAT",3,0,NA,NA,NA,NA,NA,NA,"stop","P82* I88* V103W T201G",4
"lib2","SARS-CoV-2","TGAACGAATGAACTCT",5,135.81,10.84,0,0.06,2.93,1.07,0,">1 nonsynonymous","K132R T201K",2
"lib2","SARS-CoV-2","TGAACGACATAGTAAA",1,28.29,9.65,-1.18,0.12,2.27,1.1,0.01,">1 nonsynonymous","L5K L38T",2
"lib2","SARS-CoV-2","TGAACGACGTATAAAA",7,5.63,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","I104S P133Y",2
"lib2","SARS-CoV-2","TGAACGACTATTAACA",1,13.55,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","A18L G117D Y165N",3
"lib2","SARS-CoV-2","TGAACGAGGAGAGTGT",1,64.15,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","C6I Y165T",2
"lib2","SARS-CoV-2","TGAACGAGGGAACCTG",2,31.51,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N40G V77R L183Q",3
"lib2","SARS-CoV-2","TGAACGAGGGCCCTTC",3,16.15,8.52,-2.32,0.29,1.81,1.11,0.03,">1 nonsynonymous","K56V Y91S G155S",3
"lib2","SARS-CoV-2","TGAACGAGTTAAACTA",4,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68V W106P S129E",3
"lib2","SARS-CoV-2","TGAACGATATAATGTT",8,96.81,10.74,-0.09,0.06,2.92,1.08,0,"1 nonsynonymous","G83H",1
"lib2","SARS-CoV-2","TGAACGCACATGCCGT",17,270.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F12L K56W T140I R179F",4
"lib2","SARS-CoV-2","TGAACGCAGTGGTTAG",14,105.79,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I72S P82T F156N K199P",4
"lib2","SARS-CoV-2","TGAACGCCAGAACGTT",9,116.45,10.86,0.02,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACGCTCCAGAGAC",3,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L T85L",2
"lib2","SARS-CoV-2","TGAACGGAGTTCCTCA",8,67.13,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L60T T100P",2
"lib2","SARS-CoV-2","TGAACGGCACCCCTTA",7,65.81,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51A Y91G N107D C150G",4
"lib2","SARS-CoV-2","TGAACGGGCTTGTAAA",5,123.38,10.73,-0.11,0.03,2.99,1.03,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","TGAACGGGTCCGTTTA",2,76.99,6.92,-3.92,0.17,1.76,1.12,0,">1 nonsynonymous","N1E C150K",2
"lib2","SARS-CoV-2","TGAACGGTAAATTTGA",1,48.99,NA,NA,NA,NA,NA,NA,"stop","R127M Q144* F167Y K198R",4
"lib2","SARS-CoV-2","TGAACGGTTTATAAAA",13,82.14,6.11,-4.73,0.54,1.5,1.13,0.01,">1 nonsynonymous","D90L G146M G174L",3
"lib2","SARS-CoV-2","TGAACGTACACATAAA",1,12.45,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R25F C61R D98R S164F G172C",5
"lib2","SARS-CoV-2","TGAACGTGGATGGAAA",1,0.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L T63M V103P S184A",4
"lib2","SARS-CoV-2","TGAACGTTGGGATGCA",2,3.86,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TGAACTAAAAACCGAA",7,82.39,8.98,-1.86,0.04,2.92,1.11,0,">1 nonsynonymous","G116Y G166Q",2
"lib2","SARS-CoV-2","TGAACTAAAAACGTAG",10,368.69,10.8,-0.03,0.05,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAACTAAAGATTGAT",3,60.35,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40E G51R D68E Y119V H189L",5
"lib2","SARS-CoV-2","TGAACTAACGAGTACA",1,65.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S139R P177I",2
"lib2","SARS-CoV-2","TGAACTAAGAGGTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","E135L N151P G174*",3
"lib2","SARS-CoV-2","TGAACTAATCCCACCA",4,31.9,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y35D C49Y D59L Y93R D98I D137C",6
"lib2","SARS-CoV-2","TGAACTAATTACCAAG",4,60.44,10.08,-0.76,0.07,2.51,1.05,0,">1 nonsynonymous","V37A V52Q D90K",3
"lib2","SARS-CoV-2","TGAACTAGCGTTATAT",2,26.09,7.96,-2.87,0.15,1.81,1.08,0.01,">1 nonsynonymous","E10A A18T G174T E186A",4
"lib2","SARS-CoV-2","TGAACTAGCTTTAAAC",15,2.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36D T100P N110W Y123V L125P N130M",6
"lib2","SARS-CoV-2","TGAACTAGGTCTACAA",1,34.95,10.13,-0.71,0.08,2.88,1.03,0,">1 nonsynonymous","S41Y L60T G83S",3
"lib2","SARS-CoV-2","TGAACTATAAGTACAT",3,33.15,6,-4.84,1.44,3,1.21,0.01,">1 nonsynonymous","D90F Y165V S184R",3
"lib2","SARS-CoV-2","TGAACTATAATGGATA",4,49.44,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y35T V65M N118L R127M P161F",5
"lib2","SARS-CoV-2","TGAACTATGCATACAC",12,3.99,NA,NA,NA,NA,NA,NA,"stop","W23* Q176C",2
"lib2","SARS-CoV-2","TGAACTATTAGTTTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","T3S S43* C61S Y165I",4
"lib2","SARS-CoV-2","TGAACTCAAAACACGA",1,42.63,10.03,-0.8,0.09,2.19,1.06,0,">1 nonsynonymous","A33V F99H",2
"lib2","SARS-CoV-2","TGAACTCCACTACGGT",3,3.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L D90Y P149L F156A L162C",5
"lib2","SARS-CoV-2","TGAACTCTAGATGAGT",4,43.38,8.11,-2.72,0.11,1.81,1.03,0.01,"1 nonsynonymous","Y121D",1
"lib2","SARS-CoV-2","TGAACTGGGCAACAAG",4,10.62,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F62V I104K C195L",3
"lib2","SARS-CoV-2","TGAACTGTAAGAAAAA",8,104.31,7.47,-3.36,0.24,1.54,1.18,0.01,">1 nonsynonymous","Y35L A89E",2
"lib2","SARS-CoV-2","TGAACTTAAAGGTTGA",1,16.24,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N157Y V180A",2
"lib2","SARS-CoV-2","TGAACTTACATAGGAA",1,4.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65S A145R G155N",3
"lib2","SARS-CoV-2","TGAACTTACCAAATGT",10,144.1,10.81,-0.03,0.04,2.97,1.05,0,"1 nonsynonymous","G116P",1
"lib2","SARS-CoV-2","TGAACTTATCAATAAC",22,3.03,NA,NA,NA,NA,NA,NA,"stop","Q79* L131Q A190L",3
"lib2","SARS-CoV-2","TGAACTTGCCGAGAAA",3,28.55,9.66,-1.18,0.09,1.95,1.11,0,">1 nonsynonymous","F47Y T55M I80L",3
"lib2","SARS-CoV-2","TGAACTTTGCCATACC",4,18.74,6,-4.84,0.87,3,1.1,0.01,">1 nonsynonymous","D34Y G51D L122E G155C",4
"lib2","SARS-CoV-2","TGAACTTTTTTGACAA",24,273.14,6,-4.84,0.85,1.5,1.12,0.01,">1 nonsynonymous","R27Q L60T D90Y G155V",4
"lib2","SARS-CoV-2","TGAAGAAAATTACTGC",3,83.39,10.14,-0.7,0.04,2.8,1.1,0,">1 nonsynonymous","T100K N107A",2
"lib2","SARS-CoV-2","TGAAGAAACCACGTTA",5,44.21,9.66,-1.17,0.12,2.02,1.07,0.01,">1 nonsynonymous","N40C C61A A81S",3
"lib2","SARS-CoV-2","TGAAGAAACTGCGCAA",1,13.34,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","D59F D98V K114P",3
"lib2","SARS-CoV-2","TGAAGAAATAAAGTTT",1,21.05,9.78,-1.05,0.18,2.18,1.01,0.01,">1 nonsynonymous","S36W K94S",2
"lib2","SARS-CoV-2","TGAAGAAATAAATCAT",7,67.04,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K26E S45W C158S T201L",4
"lib2","SARS-CoV-2","TGAAGAAATAGTGCCC",4,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TGAAGAACAAATCTAC",7,4.5,NA,NA,NA,NA,NA,NA,"stop","F44A G51K Y93A T170H K198*",5
"lib2","SARS-CoV-2","TGAAGAACAATAATTA",3,60.28,10.81,-0.03,0.04,2.97,1.03,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","TGAAGAAGAAAAGATA",2,14.04,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","F17S S69I G101L S139R E154F",5
"lib2","SARS-CoV-2","TGAAGAAGATAATTAT",7,26.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Q84T L183Q",2
"lib2","SARS-CoV-2","TGAAGAAGGCGTGAAC",4,37.75,10.79,-0.04,0.07,2.99,1.03,0,"1 nonsynonymous","G196V",1
"lib2","SARS-CoV-2","TGAAGAAGGGAGTTAG",1,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126I P133A Y143K",3
"lib2","SARS-CoV-2","TGAAGAAGTCACCCGT",7,138.58,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V37A K87S P161I",3
"lib2","SARS-CoV-2","TGAAGAATATACGAAT",3,8.61,6.4,-4.44,0.64,2.11,1.19,0.02,">1 nonsynonymous","V20L K87M T100L I138V Q144W",5
"lib2","SARS-CoV-2","TGAAGAATTACATGGT",1,0.32,NA,NA,NA,NA,NA,NA,"stop","P7I E141I N151* F156D",4
"lib2","SARS-CoV-2","TGAAGACAAATACTCT",6,2.93,NA,NA,NA,NA,NA,NA,"stop","D59* N64R K87S S139D",4
"lib2","SARS-CoV-2","TGAAGACAATGGGAAC",7,0.16,NA,NA,NA,NA,NA,NA,"stop","T3M S19E F44G K132* G146F",5
"lib2","SARS-CoV-2","TGAAGACACCATGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41* L122N T148S F167M",4
"lib2","SARS-CoV-2","TGAAGACATGAGACAT",1,15.51,8.15,-2.69,0.34,1.5,1.01,0.04,">1 nonsynonymous","G9I D34Y P54D D90T K199T",5
"lib2","SARS-CoV-2","TGAAGACCAACGCCAG",5,48.17,9.66,-1.18,0.08,2.35,1.06,0,">1 nonsynonymous","C6K C61F",2
"lib2","SARS-CoV-2","TGAAGACCTTGATTCA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17W Y66* Y119F V173F",4
"lib2","SARS-CoV-2","TGAAGACGACAACGAA",3,18.7,7,-3.84,0.5,1.5,1.21,0.02,">1 nonsynonymous","N13Y Y35K V180I",3
"lib2","SARS-CoV-2","TGAAGACTACCCATAC",6,37.32,9.35,-1.49,0.19,1.88,1.07,0.01,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","TGAAGACTATACATCT",3,35.6,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","W23P S41T T85M V173T",4
"lib2","SARS-CoV-2","TGAAGACTTACAGAAA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","Y66R V77G D90V Y119S D137* G155H P161D",7
"lib2","SARS-CoV-2","TGAAGACTTATGATAA",1,38.04,9.56,-1.27,0.07,2.9,1.05,0,">1 nonsynonymous","C61Y A145R",2
"lib2","SARS-CoV-2","TGAAGAGACTTTTATG",4,42.13,7.2,-3.63,0.28,1.5,1.13,0.02,">1 nonsynonymous","Y50S D90L C158P Y165N",4
"lib2","SARS-CoV-2","TGAAGAGATTGAGCAT",1,8.74,10.97,0.13,0.08,3,1.02,0,"1 nonsynonymous","I138M",1
"lib2","SARS-CoV-2","TGAAGAGGATACTATG",1,19.68,6.01,-4.83,0.58,3,1.09,0,">1 nonsynonymous","N64C Y123D G146P",3
"lib2","SARS-CoV-2","TGAAGATAATTTCTTA",2,46.97,10.88,0.05,0.06,3,1.03,0,"1 nonsynonymous","K128P",1
"lib2","SARS-CoV-2","TGAAGATAGGCGCCCG",9,92.14,6.09,-4.74,0.88,1.5,1.15,0.02,">1 nonsynonymous","N40G G51K W106M Y143V",4
"lib2","SARS-CoV-2","TGAAGATCACTTTATA",10,327.05,10.86,0.02,0.05,2.99,1.04,0,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","TGAAGATCCTTCCTAC",8,50.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41C K56R W106D F160V",4
"lib2","SARS-CoV-2","TGAAGATGAAATAAAT",5,15.48,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S69P G86V",2
"lib2","SARS-CoV-2","TGAAGATGGTACTGGT",4,71.42,9.97,-0.87,0.06,2.82,1.02,0,"1 nonsynonymous","N107K",1
"lib2","SARS-CoV-2","TGAAGCAACCCCGCAA",12,257.24,10.8,-0.03,0.03,2.96,1.05,0,">1 nonsynonymous","T100A N130P",2
"lib2","SARS-CoV-2","TGAAGCAACGGGCCGA",1,13.07,6.13,-4.71,1.16,1.5,1.47,0.07,">1 nonsynonymous","V11P Y121S",2
"lib2","SARS-CoV-2","TGAAGCAACTCGGTTT",2,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M D90I I138L",3
"lib2","SARS-CoV-2","TGAAGCAAGACTAGCG",2,48.49,10.43,-0.41,0.07,2.92,1.05,0,"1 nonsynonymous","A67I",1
"lib2","SARS-CoV-2","TGAAGCACAAGTACAA",2,56.94,10.77,-0.07,0.04,2.98,1,0,">1 nonsynonymous","L5R G152Q S200C",3
"lib2","SARS-CoV-2","TGAAGCACACTATACC",25,125.84,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A14V P54V V77P K87L S113D C150S",6
"lib2","SARS-CoV-2","TGAAGCACATGAAAAC",17,43.72,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","G9V L60R D68N Y91G S139H P149F Y165M L183T",8
"lib2","SARS-CoV-2","TGAAGCACCAGCGGAT",4,0.22,NA,NA,NA,NA,NA,NA,"stop","A14W N24* F62T N130I",4
"lib2","SARS-CoV-2","TGAAGCACTATACATT",3,14.61,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","G116V C150Y",2
"lib2","SARS-CoV-2","TGAAGCACTCTAGTTA",5,57.02,6,-4.84,2,1.5,1.26,0.03,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","TGAAGCAGAACGAAAA",4,36.9,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","C6E R25A T63R G155N T170F T201I",6
"lib2","SARS-CoV-2","TGAAGCAGACGCCTAA",4,26.07,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G9M W23R C61G S129L T170R",5
"lib2","SARS-CoV-2","TGAAGCATACAAGGTA",2,4.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGAAGCATGGTTATGA",2,16.19,6,-4.84,2,1.5,1.14,0.02,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","TGAAGCATTATTTTAC",9,132.27,7.12,-3.71,0.15,1.79,1.19,0,">1 nonsynonymous","C150E T201Q",2
"lib2","SARS-CoV-2","TGAAGCCAAACATCCG",4,51.41,10.77,-0.07,0.07,2.92,1.09,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","TGAAGCCAATCATATA",3,76.18,10.24,-0.59,0.03,2.92,1.03,0,"1 nonsynonymous","G146W",1
"lib2","SARS-CoV-2","TGAAGCCCAAGAGACA",6,56.5,9.71,-1.13,0.08,2.06,1.02,0,">1 nonsynonymous","Y35L A42V V103L",3
"lib2","SARS-CoV-2","TGAAGCCCCAGCCGTT",3,16.07,10.83,0,0.15,2.73,1.15,0.01,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TGAAGCCCCGATTTTA",2,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A K114A V173I",3
"lib2","SARS-CoV-2","TGAAGCCCTGGTTATC",1,0.15,NA,NA,NA,NA,NA,NA,"stop","A14* V32Q V103F D137Y",4
"lib2","SARS-CoV-2","TGAAGCCTCCGATGAC",3,53.45,10.14,-0.7,0.06,2.85,1.14,0,">1 nonsynonymous","N109Q P191R",2
"lib2","SARS-CoV-2","TGAAGCCTGAATCCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","A33* D97K P169K",3
"lib2","SARS-CoV-2","TGAAGCGCTACCTTAG",2,42.87,10.75,-0.08,0.04,2.98,1.05,0,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","TGAAGCGTATTTTGAA",8,96.67,10.79,-0.04,0.06,2.92,1.07,0,"1 nonsynonymous","S43W",1
"lib2","SARS-CoV-2","TGAAGCGTTGATATGA",1,30.94,10.08,-0.76,0.1,2.65,1.02,0.01,">1 nonsynonymous","Y39K D59L D90A A192E",4
"lib2","SARS-CoV-2","TGAAGCTAAAGATACT",11,53.95,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A89L F99L Y143S",3
"lib2","SARS-CoV-2","TGAAGCTCAAAAGCTA",3,62.24,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","Y175A Y178K",2
"lib2","SARS-CoV-2","TGAAGCTTCGATGACC",1,25.57,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V11H C49V S164P Y178I",4
"lib2","SARS-CoV-2","TGAAGGAATGAGGGAT",2,66.55,10.74,-0.1,0.04,2.87,1.14,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","TGAAGGACTCATAAAG",7,2.94,NA,NA,NA,NA,NA,NA,"stop","C6* S19L F99Q T201V",4
"lib2","SARS-CoV-2","TGAAGGATACGGTGAA",2,15.88,6,-4.84,2,3,1.07,0,">1 nonsynonymous","E10V C61S G101W",3
"lib2","SARS-CoV-2","TGAAGGATCCATACAT",1,25.05,10.63,-0.2,0.07,2.81,1.12,0,">1 nonsynonymous","F47M L188R",2
"lib2","SARS-CoV-2","TGAAGGATGAGGGACG",1,20.3,10.63,-0.2,0.06,2.85,1.12,0,"1 nonsynonymous","K128G",1
"lib2","SARS-CoV-2","TGAAGGCATACAGCTG",11,206.4,8.3,-2.53,0.15,1.5,1.07,0.01,">1 nonsynonymous","E135G Q176R",2
"lib2","SARS-CoV-2","TGAAGGCTCACAAGGC",1,13.65,10.91,0.07,0.11,2.91,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAGGCTTATCATCG",8,55.52,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","TGAAGGGACCACAAAT",9,91.78,10.79,-0.05,0.04,2.95,1.04,0,">1 nonsynonymous","L5G K128S",2
"lib2","SARS-CoV-2","TGAAGGGCAGAGAGGT",5,23.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K94G G101T N120V R127Q",4
"lib2","SARS-CoV-2","TGAAGGGGATTAAAAA",3,40.01,10.28,-0.56,0.07,2.88,1.01,0,"1 nonsynonymous","T46G",1
"lib2","SARS-CoV-2","TGAAGGTAAACCTAAT",5,57.4,7.63,-3.21,0.13,2.46,1.1,0,">1 nonsynonymous","F126S F156S",2
"lib2","SARS-CoV-2","TGAAGGTATAGGACAC",2,53.53,10.63,-0.21,0.07,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAGGTCCCCCCAAA",10,1.92,NA,NA,NA,NA,NA,NA,"stop","L38* F156I",2
"lib2","SARS-CoV-2","TGAAGGTCGCCTTCTG",1,64.63,10.07,-0.76,0.03,2.85,1.13,0,">1 nonsynonymous","N118A P149Q",2
"lib2","SARS-CoV-2","TGAAGTAAAATGGGTT",1,16.96,10.35,-0.49,0.05,3,1.04,0,">1 nonsynonymous","K87S N110L A192T",3
"lib2","SARS-CoV-2","TGAAGTAACCCGAATG",3,47.6,10.45,-0.39,0.06,2.86,1.06,0,">1 nonsynonymous","Y123L I142V",2
"lib2","SARS-CoV-2","TGAAGTAAGAACGCAA",14,116.91,6.86,-3.97,0.41,1.5,1.22,0.03,">1 nonsynonymous","S43I D90T F99H",3
"lib2","SARS-CoV-2","TGAAGTACTCAATATG",5,53.87,10.63,-0.21,0.08,2.82,1.12,0,">1 nonsynonymous","L5R S41K",2
"lib2","SARS-CoV-2","TGAAGTACTTATTGTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W G86H V103A F160I V182S",5
"lib2","SARS-CoV-2","TGAAGTAGAAAATCTT",6,81.16,10.86,0.02,0.03,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAGTAGGGGAAAAA",2,23.8,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V71S P82V",2
"lib2","SARS-CoV-2","TGAAGTATGATATCAT",6,25.45,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13F K114L P177T",3
"lib2","SARS-CoV-2","TGAAGTATGGTTATAA",3,22.94,7.66,-3.17,0.21,1.5,1.07,0.01,">1 nonsynonymous","F8K D59E A89P",3
"lib2","SARS-CoV-2","TGAAGTCAAGCATAGA",10,81.19,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y39Q N64I A81V T100S G146C",5
"lib2","SARS-CoV-2","TGAAGTCAATGTTGGT",5,24.41,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A89Q V103K",2
"lib2","SARS-CoV-2","TGAAGTCATCATATCA",14,172.77,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D112T L131G E141K",3
"lib2","SARS-CoV-2","TGAAGTCATGAAATTT",1,34.83,9.61,-1.23,0.1,2.32,1.04,0.01,">1 nonsynonymous","T46W Y91V",2
"lib2","SARS-CoV-2","TGAAGTCCGGTGAGAT",9,58.15,9.44,-1.4,0.14,1.74,1.09,0.01,">1 nonsynonymous","F99V I104M",2
"lib2","SARS-CoV-2","TGAAGTGCTATCCCAG",1,72.08,10.74,-0.1,0.07,2.86,1.16,0,">1 nonsynonymous","T46L T201Q",2
"lib2","SARS-CoV-2","TGAAGTGGAGGCCATA",5,28.25,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","L60F A81F F99G N151T",4
"lib2","SARS-CoV-2","TGAAGTGTATACAAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A22R K128* D137V E154A",4
"lib2","SARS-CoV-2","TGAAGTGTTAACTGCT",5,39.49,10.18,-0.66,0.05,2.96,1.02,0,"1 nonsynonymous","L57T",1
"lib2","SARS-CoV-2","TGAAGTTAAAAAAAAA",3,49.63,10,-0.84,0.06,2.64,1.09,0,"1 nonsynonymous","N30I",1
"lib2","SARS-CoV-2","TGAAGTTAAACAATTG",9,3.31,NA,NA,NA,NA,NA,NA,"stop","L57* C102V F126H K132I",4
"lib2","SARS-CoV-2","TGAAGTTCATTATAAT",11,114.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G86S Y121C",2
"lib2","SARS-CoV-2","TGAAGTTCTGAAAATA",1,2.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38Q N107R S129G",3
"lib2","SARS-CoV-2","TGAAGTTGTATTGGTA",2,19.03,10.75,-0.08,0.07,2.95,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAAGTTGTTATTATA",5,30.42,9.97,-0.86,0.08,2.34,1,0,"1 nonsynonymous","Y178R",1
"lib2","SARS-CoV-2","TGAAGTTTGTCCCGCA",2,0.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G S41V F62S D137E V181F",5
"lib2","SARS-CoV-2","TGAATAAAAAAAAAGG",16,282.07,10.31,-0.53,0.02,2.91,1.03,0,">1 nonsynonymous","A14T F44I L122T",3
"lib2","SARS-CoV-2","TGAATAAAACATGATG",2,11.12,10.66,-0.17,0.06,2.91,1.1,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","TGAATAAAATAAAATG",4,30.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L125H Y175T",2
"lib2","SARS-CoV-2","TGAATAAACAAATCCT",6,54.08,10.73,-0.11,0.04,2.99,1.04,0,">1 nonsynonymous","G9R T201P",2
"lib2","SARS-CoV-2","TGAATAAACAGCCTTG",1,5.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2F P82L L162P P197L",4
"lib2","SARS-CoV-2","TGAATAAACATGCGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F G146L",2
"lib2","SARS-CoV-2","TGAATAAACCAAGACA",11,95.34,10.28,-0.56,0.05,2.81,1.08,0,">1 nonsynonymous","A105T K128L",2
"lib2","SARS-CoV-2","TGAATAAACTGACGTT",5,42.49,8.24,-2.6,0.11,2,1.02,0,">1 nonsynonymous","R73A W106S",2
"lib2","SARS-CoV-2","TGAATAACAGTTATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","P7T F12D D59S T85W F99L T201*",6
"lib2","SARS-CoV-2","TGAATAACGAACAATT",5,117.11,6.49,-4.34,0.49,1.5,1.19,0.02,">1 nonsynonymous","T55D P82R Y165F K199I",4
"lib2","SARS-CoV-2","TGAATAACGTTTTCTT",1,7.09,7.63,-3.21,0.15,2.59,1.3,0.01,">1 nonsynonymous","L5P C150S",2
"lib2","SARS-CoV-2","TGAATAACTTAAAACA",2,1.4,NA,NA,NA,NA,NA,NA,"stop","I88* F99P A105Q",3
"lib2","SARS-CoV-2","TGAATAAGTAGGAAAG",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34V V77L A145E",3
"lib2","SARS-CoV-2","TGAATAAGTCCCCCTA",9,250.58,8.39,-2.44,0.12,2.54,1.07,0.01,">1 nonsynonymous","T3R N157F",2
"lib2","SARS-CoV-2","TGAATAATAAAAAATA",4,106.34,8.35,-2.49,0.11,2.47,1.07,0.01,"1 nonsynonymous","N157C",1
"lib2","SARS-CoV-2","TGAATAATACTCATAG",3,2.17,NA,NA,NA,NA,NA,NA,"stop","A33* S139D",2
"lib2","SARS-CoV-2","TGAATAATATGCCAAA",1,43.51,10.39,-0.45,0.05,2.91,1.08,0,">1 nonsynonymous","Y35S S200F",2
"lib2","SARS-CoV-2","TGAATAATCAACCTAA",6,0.02,NA,NA,NA,NA,NA,NA,"stop","V11S F47I Y66* S129I",4
"lib2","SARS-CoV-2","TGAATAATGATCCATT",1,0.39,NA,NA,NA,NA,NA,NA,"stop","L38T L60* F126A Y175C",4
"lib2","SARS-CoV-2","TGAATAATGTGTTCTC",12,213.63,10.57,-0.27,0.03,2.92,1.07,0,">1 nonsynonymous","I88V N151M K198R",3
"lib2","SARS-CoV-2","TGAATACAAAAGCAAG",5,55.24,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","T55D T170F Y175F R179C",4
"lib2","SARS-CoV-2","TGAATACAAAAGGGTT",1,1.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I72Y",1
"lib2","SARS-CoV-2","TGAATACATAATCGGT",8,88.21,10.72,-0.11,0.05,2.9,1.11,0,"1 nonsynonymous","V173D",1
"lib2","SARS-CoV-2","TGAATACATACTCATA",6,96.12,7.63,-3.21,0.2,1.5,1.12,0.01,">1 nonsynonymous","I28K Y119S S200Y",3
"lib2","SARS-CoV-2","TGAATACCAGACCACG",5,15.04,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5T K94T C158A",3
"lib2","SARS-CoV-2","TGAATACCATGTCTGT",11,4.18,NA,NA,NA,NA,NA,NA,"stop","A67R K114* Y143F G155V",4
"lib2","SARS-CoV-2","TGAATACCATTCTATA",4,46.53,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S45W I88L R127G S139R C158I",5
"lib2","SARS-CoV-2","TGAATACCGCATATTA",3,46.2,9.24,-1.59,0.06,1.97,1.13,0,">1 nonsynonymous","V20A T63R E141C A192T",4
"lib2","SARS-CoV-2","TGAATACCTCAACAGG",6,113.34,9.28,-1.56,0.07,1.85,1.06,0,">1 nonsynonymous","Y66F Q79A S139D",3
"lib2","SARS-CoV-2","TGAATACGATAGTTCT",12,41.56,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S45P I80D E141R",3
"lib2","SARS-CoV-2","TGAATACGATCTAACA",7,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38F G51W Y123V",3
"lib2","SARS-CoV-2","TGAATACTGTGAATTG",4,45.6,7.6,-3.24,0.1,1.88,1.12,0,">1 nonsynonymous","W106L G166R",2
"lib2","SARS-CoV-2","TGAATACTTAGCAACA",13,1.32,NA,NA,NA,NA,NA,NA,"stop","D59I Y119V R127*",3
"lib2","SARS-CoV-2","TGAATAGAATATCATA",3,0.23,NA,NA,NA,NA,NA,NA,"stop","N4M V103* K128S",3
"lib2","SARS-CoV-2","TGAATAGAGGACCAAC",1,29.36,10.89,0.05,0.05,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAATAGATGACCTAA",9,33.89,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","S19G I88P",2
"lib2","SARS-CoV-2","TGAATAGTACATGCGT",4,8,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A105R K114L K132Q I138K Q144P P149L F156H P197R",8
"lib2","SARS-CoV-2","TGAATAGTAGATAGGA",4,151.06,10.41,-0.42,0.04,2.91,1.02,0,"1 nonsynonymous","F17Y",1
"lib2","SARS-CoV-2","TGAATAGTTAAATGCC",10,6.69,NA,NA,NA,NA,NA,NA,"stop","G9V A42I T55N E135* E154M P177S",6
"lib2","SARS-CoV-2","TGAATATAAAAAGTAC",6,83.35,9.2,-1.64,0.05,2.75,1.08,0,">1 nonsynonymous","T3W A33Y G117Y G146S P197S",5
"lib2","SARS-CoV-2","TGAATATAACATAAGG",1,18.76,10.75,-0.09,0.06,3,1.05,0,">1 nonsynonymous","G9N D59C",2
"lib2","SARS-CoV-2","TGAATATATATGCGTT",8,28.08,8.21,-2.62,0.25,1.69,1.17,0.03,">1 nonsynonymous","D34H T85K Y91V",3
"lib2","SARS-CoV-2","TGAATATCACGGCAAC",2,10.47,10.24,-0.6,0.18,2.33,1.2,0.01,">1 nonsynonymous","D90C E141Y",2
"lib2","SARS-CoV-2","TGAATATCCCTGGTGA",5,91.44,10.38,-0.46,0.03,2.98,1.01,0,">1 nonsynonymous","G9V I28V T55E",3
"lib2","SARS-CoV-2","TGAATATGAGACAAAT",3,24.95,6,-4.84,1.4,1.5,1.11,0.02,">1 nonsynonymous","F8D K56D P96S S113G F160A",5
"lib2","SARS-CoV-2","TGAATATGGCCAGATG",3,12.78,9.43,-1.41,0.33,2.25,1.29,0.06,"wildtype","",0
"lib2","SARS-CoV-2","TGAATATGGGTTTATA",1,18.13,6.02,-4.82,0.57,1.64,1.12,0.01,">1 nonsynonymous","N92K V103Y",2
"lib2","SARS-CoV-2","TGAATATTCCAAACGG",4,30.11,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T15C N107A P177Q",3
"lib2","SARS-CoV-2","TGAATATTCTTACAAT",1,0.37,NA,NA,NA,NA,NA,NA,"stop","C49N N64P K128L Y178* V180D T201S",6
"lib2","SARS-CoV-2","TGAATATTGACTGCAA",12,64.71,7.76,-3.07,0.25,1.5,1.12,0.03,">1 nonsynonymous","K87T A105K P169S",3
"lib2","SARS-CoV-2","TGAATATTGCTTCCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60G P82R G101W",3
"lib2","SARS-CoV-2","TGAATCAAATCAAGCT",1,0.1,NA,NA,NA,NA,NA,NA,"stop","P7T F12L F44V K87T G166*",5
"lib2","SARS-CoV-2","TGAATCAAATCTGAAC",6,37.81,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A14I I28K S41L G86E D90F P96D N151Q",7
"lib2","SARS-CoV-2","TGAATCAACCACCGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","C61R D90Y D97L L131* C158A",5
"lib2","SARS-CoV-2","TGAATCAAGTCTTTCA",1,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54T F99K V103R R127A A145G",5
"lib2","SARS-CoV-2","TGAATCACGCTACTCT",7,49.06,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D34G N40S Y50R V115L",4
"lib2","SARS-CoV-2","TGAATCACTATTATTG",12,173.51,6,-4.84,1.14,1.5,1.17,0.01,">1 nonsynonymous","V77R S139Q F167G T201V",4
"lib2","SARS-CoV-2","TGAATCAGACTACATT",1,53.31,9.71,-1.12,0.07,2.79,1.14,0,">1 nonsynonymous","K87E F160W",2
"lib2","SARS-CoV-2","TGAATCAGAGTATTAT",13,167.65,10.58,-0.25,0.03,2.97,1.03,0,">1 nonsynonymous","S43Q K48L Q144P",3
"lib2","SARS-CoV-2","TGAATCATAATTGGTC",8,1.52,NA,NA,NA,NA,NA,NA,"stop","I138L V181* A190*",3
"lib2","SARS-CoV-2","TGAATCATGATAGTTC",1,39.68,8.47,-2.37,0.14,2.61,1.08,0.01,">1 nonsynonymous","Y121F I142R",2
"lib2","SARS-CoV-2","TGAATCCAAGAAAGAC",6,168.08,7.66,-3.18,0.14,1.5,1.07,0.01,">1 nonsynonymous","G9L T46V S113K",3
"lib2","SARS-CoV-2","TGAATCCAATTCTAGC",3,69.09,10.83,-0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAATCCAGGCTGAAG",3,72.8,10.27,-0.57,0.09,2.74,1.05,0,"1 nonsynonymous","P96T",1
"lib2","SARS-CoV-2","TGAATCCCCCTATACG",2,6.82,NA,NA,NA,NA,NA,NA,"stop","V37G N64P E135G R179*",4
"lib2","SARS-CoV-2","TGAATCCCGAGTGAAC",7,83.11,9.47,-1.36,0.09,1.9,1.05,0,">1 nonsynonymous","D34R G51Q",2
"lib2","SARS-CoV-2","TGAATCCGATACCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","S43A K56M F99* P149R",4
"lib2","SARS-CoV-2","TGAATCCGGGTTATAA",11,108.09,10.68,-0.16,0.02,2.94,1.05,0,">1 nonsynonymous","P7S F160E",2
"lib2","SARS-CoV-2","TGAATCCGTGAAAGTT",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43M F62T K94T K114Q",4
"lib2","SARS-CoV-2","TGAATCCTAAACTACG",1,50.67,7.67,-3.16,0.26,1.62,1.15,0.02,">1 nonsynonymous","I2H Y175I",2
"lib2","SARS-CoV-2","TGAATCCTTCGCAAAA",5,40.99,6,-4.84,1.24,1.5,1.15,0.02,">1 nonsynonymous","A105V N120R P133L K198S",4
"lib2","SARS-CoV-2","TGAATCGCACGGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10G Y21V K48* L60V I88S",5
"lib2","SARS-CoV-2","TGAATCGCTTCTAGAA",5,24.64,9.17,-1.67,0.04,2.98,1.04,0,"1 nonsynonymous","T170L",1
"lib2","SARS-CoV-2","TGAATCGGACAAATTT",12,259.88,8.18,-2.66,0.14,1.72,1.08,0.01,">1 nonsynonymous","N4K L5I A42K G117E G152V G196R",6
"lib2","SARS-CoV-2","TGAATCTAAACCAGGT",4,32.49,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","R78L S113L E135I",3
"lib2","SARS-CoV-2","TGAATCTAAGAAATAA",7,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107H L122G S129I",3
"lib2","SARS-CoV-2","TGAATCTATATCATAA",5,24.7,9.51,-1.32,0.07,2.92,1.04,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TGAATCTCGTTTTAAT",9,1.83,NA,NA,NA,NA,NA,NA,"stop","F8L Y39P I142*",3
"lib2","SARS-CoV-2","TGAATCTGGGACCACA",1,15,6.93,-3.91,0.36,1.87,1.2,0.05,">1 nonsynonymous","S45G R124V",2
"lib2","SARS-CoV-2","TGAATCTGTACTATCG",4,19.65,7.65,-3.19,0.22,1.6,1.07,0.02,">1 nonsynonymous","A105H E154Y",2
"lib2","SARS-CoV-2","TGAATCTTACAAGGCA",2,18.73,10.76,-0.07,0.04,3,1.02,0,">1 nonsynonymous","T140D P149R",2
"lib2","SARS-CoV-2","TGAATGAACTAACATC",3,15.83,10.05,-0.79,0.18,2.08,1.27,0.02,">1 nonsynonymous","L5N F99L",2
"lib2","SARS-CoV-2","TGAATGACAAAACAAC",5,0,NA,NA,NA,NA,NA,NA,"stop","S36* N107E Y119*",3
"lib2","SARS-CoV-2","TGAATGACAGATACTT",4,47.06,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G117F P133G S139I G152V",4
"lib2","SARS-CoV-2","TGAATGACTAACCCCT",17,8.1,NA,NA,NA,NA,NA,NA,"stop","R27* D90W N151F P197A",4
"lib2","SARS-CoV-2","TGAATGACTAAGAAAT",3,37.39,10.73,-0.11,0.07,2.96,1.02,0,"1 nonsynonymous","V103I",1
"lib2","SARS-CoV-2","TGAATGACTTTATACC",3,0.07,NA,NA,NA,NA,NA,NA,"stop","P82W V103* E186L",3
"lib2","SARS-CoV-2","TGAATGAGAGCAAGGT",1,111.45,8.82,-2.01,0.08,2.88,1.11,0,">1 nonsynonymous","L5M Y119A G155M",3
"lib2","SARS-CoV-2","TGAATGATGTATATAT",10,164.93,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T63S N118S R124M C150R N157F Y178A",6
"lib2","SARS-CoV-2","TGAATGCACAATTAAT",15,127.9,9.33,-1.51,0.1,1.86,1.07,0,">1 nonsynonymous","Y21L N120M",2
"lib2","SARS-CoV-2","TGAATGCCAAATTTAG",4,110.7,10.7,-0.13,0.03,2.94,1.06,0,"1 nonsynonymous","F8M",1
"lib2","SARS-CoV-2","TGAATGCCAACAAATA",10,84.18,9.3,-1.53,0.13,1.67,1.05,0.01,">1 nonsynonymous","P96R G116E T140S",3
"lib2","SARS-CoV-2","TGAATGCCCGAGACGT",6,76.95,10.81,-0.03,0.03,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAATGCGCAAGACCA",4,30.99,10.9,0.07,0.06,2.92,1.07,0,"1 nonsynonymous","S43R",1
"lib2","SARS-CoV-2","TGAATGCGCAAGCCGT",10,137.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41K T55N D90F Y159C",4
"lib2","SARS-CoV-2","TGAATGGCGCTTATGG",5,27.78,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F12R C49V D90Y K114L R127N Q144R Y165N",7
"lib2","SARS-CoV-2","TGAATGTAACATAGCA",3,5.79,9.67,-1.16,0.14,2.82,1,0.01,">1 nonsynonymous","L57F Q84M Y91M V173E",4
"lib2","SARS-CoV-2","TGAATGTAATTGTAAA",5,43.75,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","C6N S45D T63C D90Y S129L G146S V173Y",7
"lib2","SARS-CoV-2","TGAATGTACTAGCGGG",8,171.71,10.14,-0.7,0.04,2.76,1.08,0,">1 nonsynonymous","N24Y C61P Y143F F160N",4
"lib2","SARS-CoV-2","TGAATGTCCACACCCT",3,23.61,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","V103L Y119T V181T",3
"lib2","SARS-CoV-2","TGAATGTCTTTTCCAC",6,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I F62D",2
"lib2","SARS-CoV-2","TGAATTAAATTGCCTA",6,94.14,9.57,-1.27,0.09,2.55,1.07,0,">1 nonsynonymous","T140W G146H",2
"lib2","SARS-CoV-2","TGAATTAACGAACAAA",2,72.44,9.38,-1.46,0.05,2.85,1.07,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TGAATTAACTATCAAA",5,61.94,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12T S113A F167V",3
"lib2","SARS-CoV-2","TGAATTAAGCATTAAA",6,41.13,10.84,0,0.07,2.89,1.11,0,">1 nonsynonymous","Q84T K199H",2
"lib2","SARS-CoV-2","TGAATTAATAAACGCA",1,11.68,10.93,0.1,0.07,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAATTAATTAGCCAT",6,62.66,10.1,-0.73,0.03,2.95,1.03,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","TGAATTACAAATAGAA",1,190.48,9.2,-1.64,0.05,2.83,1.07,0,"1 nonsynonymous","Q176S",1
"lib2","SARS-CoV-2","TGAATTACGCAGGCAG",2,15.97,6,-4.84,2,1.5,1.1,0.02,"1 nonsynonymous","K94T",1
"lib2","SARS-CoV-2","TGAATTACTCATCACT",21,270.36,10.77,-0.07,0.05,2.93,1.08,0,">1 nonsynonymous","P7E N120D",2
"lib2","SARS-CoV-2","TGAATTAGACTCAAAA",11,68.02,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T3W S43L A89R L125I Y175L L187S",6
"lib2","SARS-CoV-2","TGAATTAGCCCTTTAG",4,63.41,10.17,-0.66,0.03,2.94,1.07,0,">1 nonsynonymous","I138L E154V",2
"lib2","SARS-CoV-2","TGAATTAGGGCCATTT",3,19.65,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T46P N157R K198C",3
"lib2","SARS-CoV-2","TGAATTAGTACGAAGC",3,29.55,6,-4.84,2,3,1.16,0,">1 nonsynonymous","N64P A81C D90I N107I S129L",5
"lib2","SARS-CoV-2","TGAATTATCTATCCAG",12,125.76,10.84,0,0.05,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAATTATTATCGCGA",7,112.11,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","C6T Y35A L57K A81T",4
"lib2","SARS-CoV-2","TGAATTCATCTCATAT",10,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","TGAATTCCGCAGAATG",3,33.81,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T15S S36V A42D Y50H Y66S P149Q",6
"lib2","SARS-CoV-2","TGAATTCCTTTTAAGG",8,38.65,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","V20P S29R F44A S108L P149A",5
"lib2","SARS-CoV-2","TGAATTCGAGAACAAA",4,49.84,10.52,-0.32,0.05,2.9,1.05,0,">1 nonsynonymous","Y91L Q168Y P169H",3
"lib2","SARS-CoV-2","TGAATTCGAGGCCAAA",2,53.38,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","E10M V71P R78G G146N",4
"lib2","SARS-CoV-2","TGAATTCTTGGATATG",3,42.32,10.92,0.08,0.07,2.89,1.11,0,"1 nonsynonymous","A190E",1
"lib2","SARS-CoV-2","TGAATTGAATATAAGA",5,19.2,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S19K P96Y A105H",3
"lib2","SARS-CoV-2","TGAATTGCAAACCTCA",20,259.03,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F44Q D98V S129N E154N Y175Q",5
"lib2","SARS-CoV-2","TGAATTGCAGCGGTTA",7,59.95,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F44M A89G F134G Y143C",4
"lib2","SARS-CoV-2","TGAATTGCAGTAACAA",7,22.53,7.14,-3.7,0.36,1.5,1.08,0.05,">1 nonsynonymous","D98G V180S",2
"lib2","SARS-CoV-2","TGAATTGCCTACCTAA",9,134.53,9.85,-0.98,0.04,2.16,1.02,0,">1 nonsynonymous","A14C G51H K128G",3
"lib2","SARS-CoV-2","TGAATTGGGCAAACAG",4,29.17,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","P82F D98I P133C",3
"lib2","SARS-CoV-2","TGAATTTACGAAATCA",4,9,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","G51R Y91C G155P V181S",4
"lib2","SARS-CoV-2","TGAATTTACTTTTACT",4,10.25,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","F47L A81E C158I F185P",4
"lib2","SARS-CoV-2","TGAATTTCAATTCTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","C102W S113* T201E",3
"lib2","SARS-CoV-2","TGAATTTCGAAATTTC",5,7.5,9.36,-1.47,0.13,2.84,1.18,0.01,">1 nonsynonymous","F156T N171A",2
"lib2","SARS-CoV-2","TGAATTTGTTGTGTAT",2,27.71,10.89,0.05,0.08,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAATTTTCCAGCAAC",4,11.93,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","C61V Y66C D97H L131T G172R",5
"lib2","SARS-CoV-2","TGAATTTTCGAAAACA",4,0,NA,NA,NA,NA,NA,NA,"stop","F47* P54L",2
"lib2","SARS-CoV-2","TGAATTTTGAAGCCAA",6,93.9,10.89,0.05,0.06,2.94,1.06,0,">1 nonsynonymous","V37W T140A",2
"lib2","SARS-CoV-2","TGACAAAAAATACGAA",7,3.21,NA,NA,NA,NA,NA,NA,"stop","L5Q S41N F70* P82C Y123M F167Q",6
"lib2","SARS-CoV-2","TGACAAAAAGAACACA",6,8.8,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","TGACAAAAATACAAAA",2,19.42,10.27,-0.57,0.09,2.64,1.03,0,"1 nonsynonymous","K94S",1
"lib2","SARS-CoV-2","TGACAAAACAAGCTAC",8,222.56,10.66,-0.18,0.04,2.91,1.07,0,">1 nonsynonymous","N4S K48S",2
"lib2","SARS-CoV-2","TGACAAAACAATTCGA",16,3.33,NA,NA,NA,NA,NA,NA,"stop","C6I Y35*",2
"lib2","SARS-CoV-2","TGACAAAATCAACAAA",2,7.1,6.35,-4.49,0.64,1.5,1.11,0.04,">1 nonsynonymous","F70I Y123S",2
"lib2","SARS-CoV-2","TGACAAAATGCAGCCA",1,32.29,10.92,0.08,0.06,2.98,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACAAACGGACTATC",3,1.22,NA,NA,NA,NA,NA,NA,"stop","F12P V20P C61A W106* S113H P161V T170Q T201M",8
"lib2","SARS-CoV-2","TGACAAACTCATATTA",4,15.83,10.7,-0.13,0.08,3,1,0,">1 nonsynonymous","F12L A42K",2
"lib2","SARS-CoV-2","TGACAAAGAACAAAAA",2,109.86,10.14,-0.7,0.03,2.97,1.05,0,">1 nonsynonymous","L5R R73T P197R",3
"lib2","SARS-CoV-2","TGACAAAGCCCAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","T46Q D68* G83S",3
"lib2","SARS-CoV-2","TGACAAATCTACTTAC",3,50.32,10.63,-0.2,0.06,2.84,1.09,0,">1 nonsynonymous","V32L T100S H189Y P197L",4
"lib2","SARS-CoV-2","TGACAAATCTCCTAAG",7,5.14,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A42I Y50E T140P",3
"lib2","SARS-CoV-2","TGACAAATGCAGACAA",7,35.93,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V11G E76K Y93S L125W",4
"lib2","SARS-CoV-2","TGACAACAAATCAAGC",3,19.81,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C49M Y91W T148A",3
"lib2","SARS-CoV-2","TGACAACAGATAATAT",8,146.74,8.31,-2.52,0.11,2.05,1.09,0,">1 nonsynonymous","K128F F167W",2
"lib2","SARS-CoV-2","TGACAACATTCCCGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","F8N F12*",2
"lib2","SARS-CoV-2","TGACAACCATTAACAT",4,48.17,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","Y123I F134L G152T Q176E",4
"lib2","SARS-CoV-2","TGACAACGTGTCTGCG",4,21.02,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","A81P V103A C150S",3
"lib2","SARS-CoV-2","TGACAAGAAAATCCAA",4,20.65,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A81M R127I S139L",3
"lib2","SARS-CoV-2","TGACAAGAACTGCTCA",6,9.84,NA,NA,NA,NA,NA,NA,"stop","I2K I88R C102*",3
"lib2","SARS-CoV-2","TGACAAGACCCTTTAC",9,33.28,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V11A S41T F47M K94G A105R K128A",6
"lib2","SARS-CoV-2","TGACAAGACTAAGGAC",5,40.63,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L122K G146E Y165Q",3
"lib2","SARS-CoV-2","TGACAAGACTATAATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L I28T",2
"lib2","SARS-CoV-2","TGACAAGATCACGCGC",2,18.09,NA,NA,NA,NA,NA,0.15,"1 nonsynonymous","C102Q",1
"lib2","SARS-CoV-2","TGACAAGCGACCGGAG",12,34.94,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","TGACAAGGGCAAATCC",2,91.75,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","I88W A105F K198M",3
"lib2","SARS-CoV-2","TGACAAGGGTCAAGCA",3,87.06,10.79,-0.05,0.06,2.91,1.12,0,"1 nonsynonymous","K56T",1
"lib2","SARS-CoV-2","TGACAAGTCCTGATTA",5,36.13,9.49,-1.34,0.16,1.87,1.12,0.01,">1 nonsynonymous","N58S F99I",2
"lib2","SARS-CoV-2","TGACAAGTTTCCTCTA",2,2.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34S G74Q",2
"lib2","SARS-CoV-2","TGACAATAAACATGGT",13,11.82,10.6,-0.23,0.31,2.59,1.05,0.06,">1 nonsynonymous","N4A D98K",2
"lib2","SARS-CoV-2","TGACAATAAGGTGGAT",2,19.65,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13L G152R G166I T170M",4
"lib2","SARS-CoV-2","TGACAATAATCAAGAA",1,9.76,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","E10L G51H N64W N118Y V153G",5
"lib2","SARS-CoV-2","TGACAATACTGCAATG",2,38.97,9.58,-1.25,0.06,2.92,1.04,0,">1 nonsynonymous","L38I Y119G",2
"lib2","SARS-CoV-2","TGACAATATTTGCATC",2,24.44,10.7,-0.14,0.12,2.75,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGACAATCAGACTGAA",7,64.71,10.38,-0.45,0.03,2.94,1.01,0,">1 nonsynonymous","V37R Y91C T100Y",3
"lib2","SARS-CoV-2","TGACAATCCCTGGAGG",17,260.18,10.73,-0.11,0.03,2.95,1.06,0,"1 nonsynonymous","C61L",1
"lib2","SARS-CoV-2","TGACAATCCGCGCCTA",2,36.98,11,0.17,0.07,2.9,1.12,0,"1 nonsynonymous","N110K",1
"lib2","SARS-CoV-2","TGACAATGAAAGTACT",4,54.47,9.55,-1.29,0.13,2.1,1.04,0.01,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TGACAATGAGCGAGAG",4,8.35,NA,NA,NA,NA,NA,NA,"stop","G74*",1
"lib2","SARS-CoV-2","TGACAATGGAAGCATA",3,170.68,10.11,-0.72,0.02,2.86,1.02,0,"1 nonsynonymous","Y121N",1
"lib2","SARS-CoV-2","TGACAATTGAGAGGCT",14,129.03,7.04,-3.79,0.27,1.5,1.12,0.02,">1 nonsynonymous","F8A V37Y G155L",3
"lib2","SARS-CoV-2","TGACAATTTTCACACT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85A A192Y",2
"lib2","SARS-CoV-2","TGACACAAAGCGCTCC",8,115.93,10.88,0.04,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACACAACAATCCGG",2,21.34,6,-4.84,0.74,3,1.04,0,">1 nonsynonymous","G9M N64V P96Q V115R N157L Y178P",6
"lib2","SARS-CoV-2","TGACACAATGACCATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4L Q176I",2
"lib2","SARS-CoV-2","TGACACACACTATTTA",2,16.89,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","T15G V37Y L60T Q144R P149L Q168L",6
"lib2","SARS-CoV-2","TGACACACAGCTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","TGACACACGTTCCCAA",2,5.9,9.68,-1.16,0.17,2.75,1.07,0.01,">1 nonsynonymous","N24T I142N Q168S T201K",4
"lib2","SARS-CoV-2","TGACACAGCCAGCCGG",1,13.04,8.93,-1.91,0.25,1.89,1.15,0.02,">1 nonsynonymous","S19R C61P",2
"lib2","SARS-CoV-2","TGACACAGGGCTCCTT",5,30.71,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","G86T Y119D",2
"lib2","SARS-CoV-2","TGACACATACTGTCGT",1,13.17,10.83,0,0.08,2.89,1.06,0,">1 nonsynonymous","I72C N130K",2
"lib2","SARS-CoV-2","TGACACATATCCATCC",2,12.68,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G83N A89L K94V Q176N",4
"lib2","SARS-CoV-2","TGACACATGTTAATAT",6,112.34,10.77,-0.06,0.03,2.92,1.09,0,">1 nonsynonymous","D98N S139G",2
"lib2","SARS-CoV-2","TGACACATTTAGAAAA",2,13.28,10.69,-0.15,0.03,2.93,1.07,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","TGACACCAGGTACCAC",5,278.29,10.16,-0.68,0.04,2.81,1.05,0,">1 nonsynonymous","K56E N64P F134L S147R",4
"lib2","SARS-CoV-2","TGACACCCAAGCTGAA",2,1.53,NA,NA,NA,NA,NA,NA,"stop","N13D F44S V52Y E76H D98F K132* T148F P197A",8
"lib2","SARS-CoV-2","TGACACCCAAGGTCAT",4,13.1,9.57,-1.27,0.11,1.84,1.05,0.01,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","TGACACCCATCCACGG",2,86.7,8.97,-1.86,0.05,2.92,1.06,0,">1 nonsynonymous","G117R P149T",2
"lib2","SARS-CoV-2","TGACACCCCAAAACAA",2,9.93,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N1W E10K G51L W106R G152I K198Q",6
"lib2","SARS-CoV-2","TGACACCCTGTAACTA",4,2.99,NA,NA,NA,NA,NA,NA,"stop","S36V S43Y K56* D68L I104D",5
"lib2","SARS-CoV-2","TGACACCGCATAGCGC",1,4.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S I72Y P149K F156H",4
"lib2","SARS-CoV-2","TGACACCGGCTTAGTC",1,3.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T S19P P169E",3
"lib2","SARS-CoV-2","TGACACCTAATTTAAT",1,9.87,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A14C I28T N118A K132G S139C",5
"lib2","SARS-CoV-2","TGACACGATAATAGCA",4,25.56,7.18,-3.66,0.21,1.5,1.15,0.01,">1 nonsynonymous","F8L T15R S43T S113R T140L",5
"lib2","SARS-CoV-2","TGACACGCAAAACCCA",10,185.05,10.7,-0.14,0.03,2.91,1.11,0,"1 nonsynonymous","V32N",1
"lib2","SARS-CoV-2","TGACACGCCGACAAGC",2,20.22,10.79,-0.05,0.06,2.98,1.06,0,"1 nonsynonymous","V153Y",1
"lib2","SARS-CoV-2","TGACACGCTAAAACAA",8,37.06,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V37S L95R V180P",3
"lib2","SARS-CoV-2","TGACACGTCGTTGTGC",5,19.49,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","P82H K87W",2
"lib2","SARS-CoV-2","TGACACTAACGTTAAA",6,62.41,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","E10L S43A K56L I72D I88G N110D",6
"lib2","SARS-CoV-2","TGACACTACGCCACGA",2,17.05,7,-3.83,0.3,1.5,1.11,0.03,">1 nonsynonymous","P7V Y35C S113C",3
"lib2","SARS-CoV-2","TGACACTAGCAACGAA",1,12.94,8.72,-2.12,0.11,2.81,1.04,0,">1 nonsynonymous","F8I G174V",2
"lib2","SARS-CoV-2","TGACACTCAACTTGGA",8,160.41,10.36,-0.48,0.06,2.86,1.04,0,">1 nonsynonymous","S41V E135G",2
"lib2","SARS-CoV-2","TGACACTCACATTAAG",11,136.81,9.39,-1.44,0.07,1.78,1.07,0,"1 nonsynonymous","P82S",1
"lib2","SARS-CoV-2","TGACACTCTTCCAAAT",2,19.15,8.73,-2.11,0.18,1.67,1.07,0.01,">1 nonsynonymous","A33G A89S D98L I138V F160V",5
"lib2","SARS-CoV-2","TGACAGAAATAAGACG",1,26.27,10.77,-0.07,0.06,2.95,1.08,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","TGACAGAAATAAGTTG",4,37.5,8.64,-2.2,0.13,1.5,1.1,0.01,">1 nonsynonymous","S36I T63R Y121P",3
"lib2","SARS-CoV-2","TGACAGAACCTTACAG",3,81.73,10.12,-0.72,0.07,2.49,1.02,0,">1 nonsynonymous","F44P G83Y H189Y",3
"lib2","SARS-CoV-2","TGACAGAAGAATAGAA",13,0.71,NA,NA,NA,NA,NA,NA,"stop","N24G G86Y L122*",3
"lib2","SARS-CoV-2","TGACAGAAGCCTTTCA",2,19.18,7.58,-3.26,0.24,1.5,1.08,0.02,">1 nonsynonymous","P7L A22W N64A Y91N",4
"lib2","SARS-CoV-2","TGACAGAAGCTAGCCC",1,0.38,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGACAGACCAACGAGT",7,68.57,6,-4.84,2,3,1.1,0,">1 nonsynonymous","I28T Y50S I88C",3
"lib2","SARS-CoV-2","TGACAGACCACTCTAG",7,75.54,10.1,-0.74,0.05,2.89,1.07,0,">1 nonsynonymous","V37T S41T Y143L",3
"lib2","SARS-CoV-2","TGACAGACCCTTACTT",4,24.35,10.28,-0.55,0.08,2.66,1,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","TGACAGACGAACACAA",7,104.56,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V71K A105T C150V P161G G172F",5
"lib2","SARS-CoV-2","TGACAGACGTCGATCA",3,59.42,8.75,-2.08,0.09,2.93,1.09,0,">1 nonsynonymous","F134Q T170D",2
"lib2","SARS-CoV-2","TGACAGAGTATAATTA",11,99.27,9.57,-1.27,0.04,2.83,1.09,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","TGACAGCACGCGACTC",1,50.16,10.6,-0.24,0.06,2.94,1.06,0,">1 nonsynonymous","F47L S164K",2
"lib2","SARS-CoV-2","TGACAGCGACTTTGTG",2,15.45,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","E10C D34L I88S",3
"lib2","SARS-CoV-2","TGACAGCGGCGAAGGA",7,129.15,10.75,-0.08,0.03,2.94,1.08,0,">1 nonsynonymous","V37M N110P",2
"lib2","SARS-CoV-2","TGACAGCTAATAAAAG",5,46.76,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V52H R127F Q144P V153D T201S",5
"lib2","SARS-CoV-2","TGACAGCTACTGCTTT",11,1.96,NA,NA,NA,NA,NA,NA,"stop","G9*",1
"lib2","SARS-CoV-2","TGACAGGATGTCCAGT",4,96.94,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","K128T Q176P",2
"lib2","SARS-CoV-2","TGACAGGCCAGACGAG",2,1.49,NA,NA,NA,NA,NA,NA,"stop","L5P K56R I104V Q144T P149* Y175A",6
"lib2","SARS-CoV-2","TGACAGGGTATGCGCG",1,44.97,10.93,0.09,0.14,2.67,1.03,0.01,"1 nonsynonymous","E76I",1
"lib2","SARS-CoV-2","TGACAGGTTTGTAGCG",3,34.35,6.16,-4.68,0.54,3,1.2,0.01,">1 nonsynonymous","P7L G101Y G116P V173C K198V",5
"lib2","SARS-CoV-2","TGACAGTAAGTCAAGG",5,38.63,NA,NA,NA,NA,NA,0.11,"1 nonsynonymous","V180K",1
"lib2","SARS-CoV-2","TGACAGTACTGAAATG",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43A S69W G86R",3
"lib2","SARS-CoV-2","TGACAGTCCAGCCACG",6,46.47,6,-4.84,1.07,3,1.19,0,">1 nonsynonymous","S129D G152S F167L S200T",4
"lib2","SARS-CoV-2","TGACAGTGATAGTTAA",2,12.15,6,-4.84,2,3,1.01,0,">1 nonsynonymous","D68G D90E D98C",3
"lib2","SARS-CoV-2","TGACAGTTTATCAACG",10,25.55,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15N V71W P82R",3
"lib2","SARS-CoV-2","TGACATAAAACAGGAT",2,18.12,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","C49L G146W",2
"lib2","SARS-CoV-2","TGACATAAAGAAAAAT",5,161.98,10.72,-0.11,0.04,2.92,1.08,0,"1 nonsynonymous","A81G",1
"lib2","SARS-CoV-2","TGACATAACTAGTAAG",6,82.63,10.34,-0.5,0.03,2.76,1.02,0,"1 nonsynonymous","R136T",1
"lib2","SARS-CoV-2","TGACATAAGAAATGAA",2,29.31,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y35P S129C D137S S147Y",4
"lib2","SARS-CoV-2","TGACATAAGACATTGG",6,39.3,8.77,-2.07,0.23,1.5,1,0.02,">1 nonsynonymous","K26A L60S P96T",3
"lib2","SARS-CoV-2","TGACATAATGTAAATC",2,38.83,8.45,-2.39,0.22,1.55,1.24,0.03,">1 nonsynonymous","F12P N120Q V173H",3
"lib2","SARS-CoV-2","TGACATACACATAACC",3,29.71,9.76,-1.08,0.12,2.17,1.08,0.01,">1 nonsynonymous","N40H D59R W106Y",3
"lib2","SARS-CoV-2","TGACATACATACCAAC",7,91.98,10.79,-0.04,0.05,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACATACCAATTGAA",5,70.91,10.3,-0.54,0.05,2.96,1.04,0,"1 nonsynonymous","G146D",1
"lib2","SARS-CoV-2","TGACATACTATTAGGT",4,0.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26W S41R G51P Y119R",4
"lib2","SARS-CoV-2","TGACATACTGAACTCA",2,10.8,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","Y50S K87D Y93I W106S N151Q",5
"lib2","SARS-CoV-2","TGACATAGATCCAAAC",9,0.13,NA,NA,NA,NA,NA,NA,"stop","L5H F134* Y143V",3
"lib2","SARS-CoV-2","TGACATAGTATCACAA",7,144.9,10.35,-0.49,0.06,2.67,1.05,0,">1 nonsynonymous","Y123L S147Y",2
"lib2","SARS-CoV-2","TGACATCAAATTAAAA",10,125.52,10.16,-0.68,0.04,2.83,1.01,0,">1 nonsynonymous","T3S R16T D34A K114R",4
"lib2","SARS-CoV-2","TGACATCACAAAAGAA",5,41.62,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V77Y G86R T100N G152F Y175E",5
"lib2","SARS-CoV-2","TGACATCCAACCTTCA",9,66.47,6.3,-4.54,0.69,1.5,1.21,0.03,">1 nonsynonymous","S19L S41W",2
"lib2","SARS-CoV-2","TGACATCGCAGCCGAA",2,11.53,10.3,-0.54,0.08,2.82,1.09,0,">1 nonsynonymous","P7V S41Y N110G",3
"lib2","SARS-CoV-2","TGACATCGCGTTACTA",3,66.04,10.82,-0.02,0.06,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACATCTAATACAAA",1,14.4,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","C49Y N109T Q144A",3
"lib2","SARS-CoV-2","TGACATCTATAAAGCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33M C158L",2
"lib2","SARS-CoV-2","TGACATGATATAAGAT",9,67.9,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","I2H N13S Q84R Y121L Y143G",5
"lib2","SARS-CoV-2","TGACATGATCCGATTA",9,204.58,10.88,0.05,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACATGATGTAACCG",6,33.54,6.49,-4.35,0.73,1.5,1.15,0.04,">1 nonsynonymous","Y93R Y121S G172V G174A",4
"lib2","SARS-CoV-2","TGACATGGGTTGTCCT",1,16.67,9.84,-0.99,0.13,2.59,1,0.01,"1 nonsynonymous","W106K",1
"lib2","SARS-CoV-2","TGACATGGTAATCATA",3,26.21,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V11N A22T I28M L125K Y159R T201M",6
"lib2","SARS-CoV-2","TGACATGTGCCGGTAT",1,63.16,10.03,-0.8,0.07,2.69,1,0,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","TGACATTACCCTCAGA",1,2.33,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGACATTCAAGAAGGC",8,102.1,10.86,0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACATTCGAAGAAAC",6,40.24,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I2L D75H Q84K L95N D98Y",5
"lib2","SARS-CoV-2","TGACATTGCAATTAAA",4,18.86,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C6I F99V P161V",3
"lib2","SARS-CoV-2","TGACATTGCATGATCA",6,126.5,7.85,-2.99,0.15,1.5,1.08,0.01,">1 nonsynonymous","I2V G9Q L60P R73C",4
"lib2","SARS-CoV-2","TGACATTGTCGACATA",8,69.22,10.56,-0.28,0.06,2.79,1.13,0,">1 nonsynonymous","L5G P149L",2
"lib2","SARS-CoV-2","TGACATTTAATCAAAA",5,78.85,9.85,-0.98,0.07,2,1.06,0,">1 nonsynonymous","F44P C61Y D98P",3
"lib2","SARS-CoV-2","TGACATTTCGTATTCT",1,24.74,10.85,0.01,0.08,2.99,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCAAACTCTTGCG",9,14.23,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","N13W W106D F134N",3
"lib2","SARS-CoV-2","TGACCAAAGACACGGA",7,2.53,NA,NA,NA,NA,NA,NA,"stop","N107F Y119L N151*",3
"lib2","SARS-CoV-2","TGACCAAAGATCTTAA",1,16.99,10.84,0,0.04,2.86,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCAAATAGTATGT",6,41.62,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N64T F70H A105T",3
"lib2","SARS-CoV-2","TGACCAAATCACCGTT",3,42.45,9.15,-1.69,0.18,1.9,1.14,0.01,">1 nonsynonymous","G9I K94M",2
"lib2","SARS-CoV-2","TGACCAACATGCATGA",2,8.2,10.91,0.07,0.36,2.66,1.03,0.07,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","TGACCAACCGCCTGAA",1,26.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V71G R136I T148S",3
"lib2","SARS-CoV-2","TGACCAAGACTTATCA",7,50.21,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","Y93D E154C T201E",3
"lib2","SARS-CoV-2","TGACCAAGATACGTAG",2,43.88,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4F C31S G51F D112H",4
"lib2","SARS-CoV-2","TGACCAATATGCTAAG",11,3.26,NA,NA,NA,NA,NA,NA,"stop","S43T F99D L111*",3
"lib2","SARS-CoV-2","TGACCACATACGGGAA",1,56.86,10.18,-0.66,0.08,2.66,1.1,0,">1 nonsynonymous","D90L S139R",2
"lib2","SARS-CoV-2","TGACCACATAGCGCGT",2,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69R Y91H K128R N151T N171F S200V",6
"lib2","SARS-CoV-2","TGACCACTAACTCATA",7,98.87,9.16,-1.68,0.05,2.88,1.12,0,">1 nonsynonymous","Y39E P149C G174V P197L",4
"lib2","SARS-CoV-2","TGACCACTCATTAAAT",1,36.67,10.04,-0.79,0.08,2.71,1,0,">1 nonsynonymous","T3M F44L L122E P149L",4
"lib2","SARS-CoV-2","TGACCACTTGCAATCA",14,65.27,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","V71Y",1
"lib2","SARS-CoV-2","TGACCAGAACATACCT",3,35.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N58L V77D R136S",3
"lib2","SARS-CoV-2","TGACCAGCTGCCGTAT",5,55.84,8.16,-2.67,0.12,2.37,1.05,0.01,">1 nonsynonymous","S108I P197R",2
"lib2","SARS-CoV-2","TGACCAGGACAAAATC",3,41.48,8.41,-2.43,0.21,1.5,1.2,0.02,">1 nonsynonymous","S43G S113M S139L Q168H",4
"lib2","SARS-CoV-2","TGACCAGTTAAAACTG",3,9.06,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1E C49G T55N C61K C158L",5
"lib2","SARS-CoV-2","TGACCATAACCAAAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","N4D C61Y S113* A145K Q176*",5
"lib2","SARS-CoV-2","TGACCATGTCTCCTGG",8,140.17,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y35E F47C P82F",3
"lib2","SARS-CoV-2","TGACCATTCTGTATAT",1,6.22,6,-4.84,0.61,3,1.04,0.01,">1 nonsynonymous","T3A A145T C150I",3
"lib2","SARS-CoV-2","TGACCCAAATAGCTTT",1,18.46,10.64,-0.19,0.05,2.9,1.07,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","TGACCCAGAAGTCAAA",1,0.39,NA,NA,NA,NA,NA,NA,"stop","T55L G86Q D97* Y165Q",4
"lib2","SARS-CoV-2","TGACCCAGCAACATCT",4,39.5,10.86,0.02,0.07,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCCATAATTAGGT",4,44.97,10.15,-0.68,0.08,2.34,1.07,0,">1 nonsynonymous","K48Q P133T V173R",3
"lib2","SARS-CoV-2","TGACCCATTCAAATTA",7,120.77,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S36K A67N I88M Q144G Y165N L187R",6
"lib2","SARS-CoV-2","TGACCCCAAGCAATCA",9,158.03,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G86N Y165D A190E",3
"lib2","SARS-CoV-2","TGACCCCACGTACTGG",10,93.79,10.86,0.02,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCCCATTCCCTGA",8,49.2,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R179L K198H",2
"lib2","SARS-CoV-2","TGACCCCCGAATCCGA",8,28.12,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R27S N40I I88L W106R",4
"lib2","SARS-CoV-2","TGACCCCTAGTATGTG",7,22.47,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A105V G117E Y143K C158M",4
"lib2","SARS-CoV-2","TGACCCCTTAAACATG",4,27.08,6,-4.84,1.96,1.5,1.13,0.02,">1 nonsynonymous","L131K I142T",2
"lib2","SARS-CoV-2","TGACCCGAACCTATTA",22,233.96,10.78,-0.06,0.03,2.9,1.1,0,"1 nonsynonymous","T3L",1
"lib2","SARS-CoV-2","TGACCCGACACCCAGA",3,31.46,6,-4.84,1.48,1.5,1.19,0.03,">1 nonsynonymous","D34N G51L Y119C",3
"lib2","SARS-CoV-2","TGACCCTACTAGCACA",3,3.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V C49S N58T K114T",4
"lib2","SARS-CoV-2","TGACCCTCAAACGATT",1,54.11,8.42,-2.41,0.22,1.5,1.02,0.02,">1 nonsynonymous","V71I V77K T148K",3
"lib2","SARS-CoV-2","TGACCCTGAACATGAT",1,45.52,9.85,-0.99,0.12,2.89,1.03,0.01,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","TGACCCTGATTGACAT",15,207.91,10.83,0,0.03,2.95,1.04,0,">1 nonsynonymous","S53N S200L",2
"lib2","SARS-CoV-2","TGACCGAATGACATAA",11,17.59,NA,NA,NA,NA,NA,NA,"stop","C6N K94*",2
"lib2","SARS-CoV-2","TGACCGACAAAGGCGT",2,30.61,10.75,-0.09,0.04,2.93,1.08,0,"1 nonsynonymous","T3K",1
"lib2","SARS-CoV-2","TGACCGAGATGGGTCG",7,116.24,10.08,-0.76,0.03,2.94,1.02,0,">1 nonsynonymous","G9A K87C R136M",3
"lib2","SARS-CoV-2","TGACCGATCGAGTTAT",2,23.26,8.78,-2.06,0.14,2.65,1.06,0.01,">1 nonsynonymous","C6A Y119Q",2
"lib2","SARS-CoV-2","TGACCGATTACGCACA",1,37.92,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","F167P",1
"lib2","SARS-CoV-2","TGACCGCAGTTTTTAA",4,32.79,10.89,0.05,0.08,2.96,1.07,0,"1 nonsynonymous","L5I",1
"lib2","SARS-CoV-2","TGACCGGCCGTAATTA",10,6.03,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","I72M R136E",2
"lib2","SARS-CoV-2","TGACCGGTTTATTGGC",1,44,10.81,-0.02,0.06,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCGTAAAAAAATG",3,14.97,11.19,0.35,0.08,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACCGTAATGAGATA",5,53.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R A89H K94L G116E P149L G155D",6
"lib2","SARS-CoV-2","TGACCGTACCATGTAC",1,5.9,10.24,-0.6,0.26,2.34,1.01,0.01,"1 nonsynonymous","E135W",1
"lib2","SARS-CoV-2","TGACCGTCCAATACTG",1,12.16,9.12,-1.72,0.15,2.76,1.26,0.01,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TGACCGTTAAGATAAA",5,109.45,10.72,-0.11,0.04,2.98,1.04,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","TGACCTAAACAATTAA",3,32.2,6,-4.84,2,3,1.06,0,">1 nonsynonymous","F8I F17L G74L I88Y N107L",5
"lib2","SARS-CoV-2","TGACCTAACCATGATA",6,3.33,NA,NA,NA,NA,NA,NA,"stop","F8C R27*",2
"lib2","SARS-CoV-2","TGACCTAATCTTACTT",4,10.44,6,-4.84,2,3,1.07,0,">1 nonsynonymous","D34P C61Y D90V P149I V180L",5
"lib2","SARS-CoV-2","TGACCTAATTCAATTA",4,65.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P82V Y93C S108N Y119F Y175S",5
"lib2","SARS-CoV-2","TGACCTACATACTAAT",8,104.73,10.2,-0.63,0.04,2.95,1.02,0,">1 nonsynonymous","V11F A42K C61L",3
"lib2","SARS-CoV-2","TGACCTACGTACAAAG",4,17.14,9.95,-0.89,0.08,2.86,1,0,">1 nonsynonymous","A14T S184Y",2
"lib2","SARS-CoV-2","TGACCTAGAATGGGCC",3,69.02,8.26,-2.58,0.14,2.23,1.03,0.01,">1 nonsynonymous","Y119V Q144L",2
"lib2","SARS-CoV-2","TGACCTAGGACTAAAG",1,10.92,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C49S L95G P149S V180C",4
"lib2","SARS-CoV-2","TGACCTATAGACCTGT",11,177.91,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11G R25K Y91F N120W",4
"lib2","SARS-CoV-2","TGACCTATAGTCCAGG",4,10.76,10.98,0.14,0.15,2.95,1.08,0.01,"1 nonsynonymous","T46V",1
"lib2","SARS-CoV-2","TGACCTCAGAGTACGA",6,64.69,10.72,-0.11,0.03,3,1.02,0,">1 nonsynonymous","L5G S147F",2
"lib2","SARS-CoV-2","TGACCTCCAAGATAAA",1,10.15,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","N110W Y123K E141L C150T N157K",5
"lib2","SARS-CoV-2","TGACCTCGAATCAGGT",4,51.18,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T46P R78E N110M C158V",4
"lib2","SARS-CoV-2","TGACCTCGGAAATATG",8,60.09,6.12,-4.72,0.38,1.5,1.14,0.01,">1 nonsynonymous","P7L Y39V P82L W106R",4
"lib2","SARS-CoV-2","TGACCTCTCTCTTATG",11,182.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A42H Y123R C150L Y159V",4
"lib2","SARS-CoV-2","TGACCTGACCTCTAGA",23,244.37,10.68,-0.16,0.04,2.94,1.05,0,">1 nonsynonymous","E141F T201D",2
"lib2","SARS-CoV-2","TGACCTGACTGCTAAG",6,1.94,NA,NA,NA,NA,NA,NA,"stop","E10F N107P L122*",3
"lib2","SARS-CoV-2","TGACCTGAGAATCCAG",18,96.36,9.16,-1.68,0.15,1.5,1.03,0.01,">1 nonsynonymous","F8N A14R P54R",3
"lib2","SARS-CoV-2","TGACCTGGATTTCGGG",5,59.93,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4G V77W G116V G117F G155S T170F",6
"lib2","SARS-CoV-2","TGACCTGGGTGTTCCA",3,7.99,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T3C A14M A22D N107L",4
"lib2","SARS-CoV-2","TGACCTGGTAGAACTG",5,102.97,10.82,-0.02,0.04,2.94,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TGACCTGGTTTCCCTT",2,50.41,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L38R G117L P161K Q176Y",4
"lib2","SARS-CoV-2","TGACCTGTAAAAAATA",1,10.27,10.72,-0.12,0.04,3,1.01,0,">1 nonsynonymous","V37L F47I Q84S",3
"lib2","SARS-CoV-2","TGACCTGTAACGCAGT",4,16.69,9.83,-1.01,0.07,2.76,1.09,0,">1 nonsynonymous","V37G A67L R73T",3
"lib2","SARS-CoV-2","TGACCTTACCACAGAC",1,30.71,9.92,-0.91,0.09,2.6,1,0,">1 nonsynonymous","T55A K94Q I142F P197M",4
"lib2","SARS-CoV-2","TGACCTTTAACCCGTA",4,0.01,NA,NA,NA,NA,NA,NA,"stop","W23S R78* P96H",3
"lib2","SARS-CoV-2","TGACCTTTACTGAAAG",8,124.76,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D137Q Y165L",2
"lib2","SARS-CoV-2","TGACCTTTCGTACTTA",1,13.77,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","T63Y Y93P Y121P F167R V182F",5
"lib2","SARS-CoV-2","TGACGAAAAACTAACA",8,19.86,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G51W S139V G172S",3
"lib2","SARS-CoV-2","TGACGAAAACAAGAAA",3,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113K S184Q",2
"lib2","SARS-CoV-2","TGACGAAAACCGGTCA",7,78.24,10.61,-0.23,0.04,2.91,1.04,0,">1 nonsynonymous","E141Q P149Y",2
"lib2","SARS-CoV-2","TGACGAAAGAACTTAT",10,137.82,10.49,-0.35,0.04,2.92,1.04,0,">1 nonsynonymous","G116S E141H",2
"lib2","SARS-CoV-2","TGACGAACAAAGCAAT",10,172.68,9.87,-0.97,0.07,2.18,1.07,0,">1 nonsynonymous","P7Q A33R Y39D K56G I88V S184V",6
"lib2","SARS-CoV-2","TGACGAACCTAGTAAT",4,21.52,9.67,-1.16,0.39,1.74,1.09,0.06,">1 nonsynonymous","T46W Y91V",2
"lib2","SARS-CoV-2","TGACGAAGAAATTCCA",3,48.81,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N118K Y159C",2
"lib2","SARS-CoV-2","TGACGAATAAGCACTT",1,12.39,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","P161W",1
"lib2","SARS-CoV-2","TGACGAATCCCTGAAA",5,68.69,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17V A33P C49N G172S",4
"lib2","SARS-CoV-2","TGACGAATGACGACAC",2,21.01,9.86,-0.98,0.12,2.58,1.03,0.01,">1 nonsynonymous","G51V K87F",2
"lib2","SARS-CoV-2","TGACGACAGTGCCGAC",7,73.9,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F134S T170I V180I",3
"lib2","SARS-CoV-2","TGACGACCACTAGTAT",2,93.49,6,-4.84,2,3,1.11,0,">1 nonsynonymous","P7S V37T C61Q P177E G196V",5
"lib2","SARS-CoV-2","TGACGACCGGCACCCT",7,102.96,10.89,0.05,0.05,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGACGACCTAGTTTCA",7,76.52,10.22,-0.62,0.03,2.94,1.08,0,"1 nonsynonymous","K87Q",1
"lib2","SARS-CoV-2","TGACGACTATCGGCTA",3,5.5,10.25,-0.58,0.36,2.66,1,0.04,">1 nonsynonymous","V153G Q168F T201V",3
"lib2","SARS-CoV-2","TGACGACTGCAGCAAA",10,20.98,6,-4.84,2,3,1.09,0,">1 nonsynonymous","E10A R16F I28N P54A D90M D97N I104R R136A",8
"lib2","SARS-CoV-2","TGACGAGAGAATTATA",3,22.34,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","C49G S139T E154G",3
"lib2","SARS-CoV-2","TGACGAGCAAGAAAAC",4,24.13,6,-4.84,2,3,1.14,0.02,">1 nonsynonymous","I2H G101I V182D A192K",4
"lib2","SARS-CoV-2","TGACGAGTATTCAGCA",7,47.99,7.56,-3.28,0.36,1.5,1.03,0.06,">1 nonsynonymous","K26Y N107L E141S G174C",4
"lib2","SARS-CoV-2","TGACGATACAATACGT",10,189.72,8.3,-2.53,0.11,1.94,1.09,0,">1 nonsynonymous","D97S N107L",2
"lib2","SARS-CoV-2","TGACGATCACCTAAAC",4,4.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y Y93P L183S",3
"lib2","SARS-CoV-2","TGACGATTAAGTACAA",6,83.55,9.62,-1.22,0.07,2.03,1.06,0,">1 nonsynonymous","E10G N24F",2
"lib2","SARS-CoV-2","TGACGCAAAGTACGAT",1,14.33,10.73,-0.11,0.1,2.93,1.07,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","TGACGCAACTTAGCGT",6,34.59,6.08,-4.76,1.4,1.5,1.31,0.05,">1 nonsynonymous","C6T D59G E76I D137W",4
"lib2","SARS-CoV-2","TGACGCAATCAGTATT",5,13.43,7.31,-3.52,0.54,1.5,1,0.06,">1 nonsynonymous","Y50L I80T E154Q",3
"lib2","SARS-CoV-2","TGACGCAGAACGGGTA",1,0.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F126W N157H R179G",3
"lib2","SARS-CoV-2","TGACGCAGCCAATGTA",7,45.97,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S19T G101N L131F",3
"lib2","SARS-CoV-2","TGACGCCCACGAATCG",23,197.74,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y35T F99V S113M S200T",4
"lib2","SARS-CoV-2","TGACGCCCGCATCCAT",3,44.08,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44C P96S V103I K132W P149S T201E",6
"lib2","SARS-CoV-2","TGACGCCGTCATAGGA",1,0.76,NA,NA,NA,NA,NA,NA,"stop","C31* D98Y A105K K199E",4
"lib2","SARS-CoV-2","TGACGCGAAAACGTAA",6,26.48,6.04,-4.8,0.94,1.5,1.12,0.02,">1 nonsynonymous","F99L F185S",2
"lib2","SARS-CoV-2","TGACGCGCTAATAGCA",1,1.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S N40R G152T",3
"lib2","SARS-CoV-2","TGACGCGTCTGTAGCT",10,41.61,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14V F44V N64M D90T D97V W106C N151H",7
"lib2","SARS-CoV-2","TGACGCTAAGCCTCCG",7,62.91,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12E A67S Y121S G146S",4
"lib2","SARS-CoV-2","TGACGCTGAACCTAAA",3,42.58,10.63,-0.2,0.08,2.87,1.11,0,"1 nonsynonymous","T15H",1
"lib2","SARS-CoV-2","TGACGCTTCCCATAAT",7,25.67,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F44T N64R F99Y D112R E141W C158W G174W L183C",8
"lib2","SARS-CoV-2","TGACGGAAACGGAGGG",1,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25K A33T D59N",3
"lib2","SARS-CoV-2","TGACGGAAAGTTCACT",2,29.29,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","G9I I72K T140Y",3
"lib2","SARS-CoV-2","TGACGGACACGCTAAT",6,115.22,10.78,-0.05,0.04,2.92,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGACGGAGTATGTATA",4,18.78,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L95S F167R",2
"lib2","SARS-CoV-2","TGACGGATTGGGCATG",2,9.47,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S19Q V37L E76G G116F Y175I",5
"lib2","SARS-CoV-2","TGACGGCGTTCTATGT",4,61.06,10.67,-0.16,0.04,2.9,1.05,0,"1 nonsynonymous","V52A",1
"lib2","SARS-CoV-2","TGACGGGCCTAAATAA",4,55.07,10.71,-0.13,0.04,2.93,1.09,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","TGACGGGGATTAATAA",2,18.24,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","A14V R179D",2
"lib2","SARS-CoV-2","TGACGGGTATAGTTGA",1,23.1,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G117E F134R F167I R179G",4
"lib2","SARS-CoV-2","TGACGGTAAGAAGATG",3,25.72,10.44,-0.4,0.06,2.88,1.08,0,">1 nonsynonymous","S41I P149I",2
"lib2","SARS-CoV-2","TGACGTAAGAATCGAT",4,4.27,NA,NA,NA,NA,NA,NA,"stop","D98S N120R G196*",3
"lib2","SARS-CoV-2","TGACGTAATAACCCTA",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H G86N",2
"lib2","SARS-CoV-2","TGACGTAATCAACCAG",8,78.67,9.97,-0.87,0.05,2.95,1.04,0,"1 nonsynonymous","V115C",1
"lib2","SARS-CoV-2","TGACGTAATCGCGCAA",10,28.18,8.47,-2.36,0.23,1.5,1.19,0.02,">1 nonsynonymous","T3G S108Q I142W Q168H",4
"lib2","SARS-CoV-2","TGACGTAGCAAAAATT",7,5.2,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib2","SARS-CoV-2","TGACGTAGTTCAGTCG",1,24.06,10.8,-0.04,0.09,2.89,1.09,0.01,"1 nonsynonymous","T140V",1
"lib2","SARS-CoV-2","TGACGTATAAATTAGC",15,263.66,7.59,-3.25,0.1,2.26,1.1,0,"1 nonsynonymous","C158N",1
"lib2","SARS-CoV-2","TGACGTATAAGGTGTC",2,24.58,7.88,-2.95,0.17,1.67,1.13,0.01,">1 nonsynonymous","V11F G83F T100V W106M E135M F156L",6
"lib2","SARS-CoV-2","TGACGTATATATTTGA",4,109.87,9.95,-0.88,0.05,2.8,1.06,0,">1 nonsynonymous","E10G G116Y",2
"lib2","SARS-CoV-2","TGACGTATGGTTAGTA",3,111.98,9.14,-1.7,0.08,2.43,1.07,0,">1 nonsynonymous","Q176K K198C",2
"lib2","SARS-CoV-2","TGACGTATTTGATTTG",6,6.36,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T3L S41E D68S P96R",4
"lib2","SARS-CoV-2","TGACGTCAACCCTACT",2,0.3,NA,NA,NA,NA,NA,NA,"stop","N30* L38Y D90K N157C Q163G S184H",6
"lib2","SARS-CoV-2","TGACGTCAAGAATCAT",4,41.72,10.07,-0.76,0.09,2.39,1.07,0,">1 nonsynonymous","F8V K26R L60C",3
"lib2","SARS-CoV-2","TGACGTCCTCCTGCAA",3,0.12,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","TGACGTCTGTTCTCTA",2,5.24,8.27,-2.57,0.36,2.59,1.13,0.03,">1 nonsynonymous","Y165Q T201M",2
"lib2","SARS-CoV-2","TGACGTCTTCACAACT",1,42.15,10.69,-0.14,0.04,2.94,1.05,0,">1 nonsynonymous","T3Q N151T",2
"lib2","SARS-CoV-2","TGACGTGAAAATAAAA",8,9.23,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","TGACGTGCCCAAGAAT",4,142.78,9.16,-1.68,0.06,2.74,1.08,0,">1 nonsynonymous","E10N I142W V153L",3
"lib2","SARS-CoV-2","TGACGTGCTACCATTG",6,93.87,10.63,-0.2,0.02,2.94,1.07,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","TGACGTGGCGCCACAC",15,176.63,10.82,-0.02,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACGTTACAGAGAAT",5,60.92,10.75,-0.09,0.03,2.93,1.05,0,"1 nonsynonymous","L5C",1
"lib2","SARS-CoV-2","TGACGTTAGCTATTTT",14,146.85,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N4L V52M F70S A81M Y123A T140C",6
"lib2","SARS-CoV-2","TGACGTTGATACTCTA",11,128.41,9.91,-0.93,0.07,2,1.06,0,"1 nonsynonymous","W106H",1
"lib2","SARS-CoV-2","TGACGTTTTTCTTAGA",2,0.28,NA,NA,NA,NA,NA,NA,"stop","L5A S36*",2
"lib2","SARS-CoV-2","TGACTAAAAAGACGTA",11,119.9,9.87,-0.97,0.11,1.88,1.08,0.01,">1 nonsynonymous","C61E E76T I142V",3
"lib2","SARS-CoV-2","TGACTAAAATGAAATG",2,32.65,8.86,-1.98,0.21,1.5,1.07,0.02,"1 nonsynonymous","I28P",1
"lib2","SARS-CoV-2","TGACTAAACACCCAGC",5,124.68,7.82,-3.02,0.12,2.27,1.08,0.01,">1 nonsynonymous","P54A Y91F C158R",3
"lib2","SARS-CoV-2","TGACTAAACTTTACGC",8,144.06,10.17,-0.66,0.04,2.89,1.02,0,">1 nonsynonymous","C61S D97W Y123S",3
"lib2","SARS-CoV-2","TGACTAAATGAGGAAT",9,95.91,10.84,0.01,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACTAACGGAATGCC",1,66.82,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A22L V32L A67P G174H",4
"lib2","SARS-CoV-2","TGACTAAGACTATTTT",5,21.03,8.53,-2.31,0.17,2.02,1,0.02,"1 nonsynonymous","D112M",1
"lib2","SARS-CoV-2","TGACTAATAACATTAT",1,47.21,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F47V T170L Q176C S184V",4
"lib2","SARS-CoV-2","TGACTACAAGGCAATT",5,17.65,6,-4.84,1.57,3,1.26,0.01,">1 nonsynonymous","G83C G86T V173T",3
"lib2","SARS-CoV-2","TGACTACATTCACGTG",8,46.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60P G101Y N107P",3
"lib2","SARS-CoV-2","TGACTACCAGCTAACG",5,30.66,10.22,-0.61,0.15,2.24,1.06,0.01,">1 nonsynonymous","F62E T140C F160R",3
"lib2","SARS-CoV-2","TGACTACCCAGTTCCG",3,32.9,10.61,-0.23,0.04,2.83,1.17,0,">1 nonsynonymous","T3N C61M",2
"lib2","SARS-CoV-2","TGACTACTATTCAAAC",6,0.71,NA,NA,NA,NA,NA,NA,"stop","T55F E154*",2
"lib2","SARS-CoV-2","TGACTACTCTCACGAA",6,138.65,10.86,0.03,0.05,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TGACTACTTGTCATAA",2,15.88,10.34,-0.49,0.11,2.9,1.13,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TGACTAGAAATTGCAA",1,39.18,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","L5T A105I T148L Y159S",4
"lib2","SARS-CoV-2","TGACTAGACCAAGCGG",5,17.54,6,-4.84,2,3,1.21,0.01,"1 nonsynonymous","V103H",1
"lib2","SARS-CoV-2","TGACTAGAGTTCCAGG",9,71.68,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A33V T46G G86K S200C",4
"lib2","SARS-CoV-2","TGACTAGCAAACCGGA",1,17.83,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","E10Y K94M Y123K C150D",4
"lib2","SARS-CoV-2","TGACTAGGTACACAAA",6,1.92,NA,NA,NA,NA,NA,NA,"stop","R27L C49Y K87N K94*",4
"lib2","SARS-CoV-2","TGACTATACCAGTGAA",3,29.01,8.23,-2.61,0.17,1.64,1.05,0.01,">1 nonsynonymous","V37K D90G L131F F156I T201S",5
"lib2","SARS-CoV-2","TGACTATCAAAAACGG",5,70.05,6,-4.84,1.24,2.21,1.22,0.01,">1 nonsynonymous","L60P F70S A81D A105W F156L T201R",6
"lib2","SARS-CoV-2","TGACTATCTAATAATC",7,177.94,10.68,-0.16,0.02,2.94,1.06,0,">1 nonsynonymous","N58R S139T",2
"lib2","SARS-CoV-2","TGACTATCTAGCATAT",2,24.1,10.19,-0.65,0.11,2.13,1,0,">1 nonsynonymous","S41F W106Q",2
"lib2","SARS-CoV-2","TGACTATGAAGATACC",6,17.42,6,-4.84,2,3,1.1,0,">1 nonsynonymous","V77L K87H G101L G152F N171S K198N",6
"lib2","SARS-CoV-2","TGACTATGAGTATATT",4,29.01,10.79,-0.05,0.06,2.84,1.17,0,">1 nonsynonymous","I2H T85R D98K",3
"lib2","SARS-CoV-2","TGACTATGTGTAATTA",2,6.83,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y93P F134Y G166A",3
"lib2","SARS-CoV-2","TGACTATTGAAGTGTA",3,24.79,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86R I142Y",2
"lib2","SARS-CoV-2","TGACTATTTCATAAAA",1,50.55,6.43,-4.41,0.61,1.5,1.15,0.02,">1 nonsynonymous","D112M Q168N",2
"lib2","SARS-CoV-2","TGACTCAAAATGGGGA",7,130.85,10.79,-0.04,0.05,2.97,1.05,0,">1 nonsynonymous","C61V D98N",2
"lib2","SARS-CoV-2","TGACTCAACGTAACAG",8,182.76,10.64,-0.19,0.03,2.92,1.07,0,">1 nonsynonymous","N58S V153T",2
"lib2","SARS-CoV-2","TGACTCAATATGGAAA",7,34.5,6.69,-4.15,0.53,1.5,1.12,0.05,">1 nonsynonymous","N13I R16T Y39D K87S L95K F99Y N107P",7
"lib2","SARS-CoV-2","TGACTCAATCAATATT",2,14.83,10.81,-0.02,0.1,2.87,1.14,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","TGACTCACGGTAATTC",19,210.53,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","I142Q R179Y",2
"lib2","SARS-CoV-2","TGACTCAGTGAAATTT",13,91.73,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V20L N107T S113I F160V",4
"lib2","SARS-CoV-2","TGACTCCACTCGAAAA",7,17.9,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","K26E S43F W106P",3
"lib2","SARS-CoV-2","TGACTCCCGAGGATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6M Y21S T55N K114* N120L L131Y G152Y N157W",8
"lib2","SARS-CoV-2","TGACTCCCGTGCTGCA",4,0.11,NA,NA,NA,NA,NA,NA,"stop","I28* D59C D68F L95R Q176A",5
"lib2","SARS-CoV-2","TGACTCCGCTCTATCA",3,21.3,9.34,-1.49,0.3,1.5,1,0.04,"1 nonsynonymous","D68E",1
"lib2","SARS-CoV-2","TGACTCCTAAATAGCT",1,0.1,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGACTCCTGCATACTC",1,17.6,6.94,-3.89,0.6,1.5,1,0.07,">1 nonsynonymous","G9V L95V R179D",3
"lib2","SARS-CoV-2","TGACTCGAAAATGCTA",1,3.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18S Y39L I80M K128F Y165M",5
"lib2","SARS-CoV-2","TGACTCGCTATGAAAC",2,35.52,8.2,-2.64,0.15,1.96,1.06,0.01,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","TGACTCGTAAACTGCC",5,55.04,9.85,-0.99,0.1,2.51,1.07,0.01,"1 nonsynonymous","C6R",1
"lib2","SARS-CoV-2","TGACTCGTCGCATACT",3,17.01,8.29,-2.54,0.44,1.7,1.14,0.04,">1 nonsynonymous","N107H F126Y",2
"lib2","SARS-CoV-2","TGACTCTCAATAACAA",4,19.99,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V77G L122Y S139Y T148P C150D",5
"lib2","SARS-CoV-2","TGACTCTCCCAATACA",6,0.22,NA,NA,NA,NA,NA,NA,"stop","N4H D97G N157P G166*",4
"lib2","SARS-CoV-2","TGACTCTTCGCGCACA",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90C V173P",2
"lib2","SARS-CoV-2","TGACTCTTTTAAACAT",16,266.52,9.44,-1.39,0.04,2.75,1.09,0,">1 nonsynonymous","A33G F62M T140K Q168T T201A",5
"lib2","SARS-CoV-2","TGACTGAATTCTTCTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32G A145S",2
"lib2","SARS-CoV-2","TGACTGACAATGCTGA",7,59.98,10.3,-0.54,0.03,2.84,1.1,0,">1 nonsynonymous","A14V T100L",2
"lib2","SARS-CoV-2","TGACTGCACCATGACA",2,15.12,6.88,-3.95,0.33,1.5,1.14,0.03,">1 nonsynonymous","E10A G86W V153Q",3
"lib2","SARS-CoV-2","TGACTGCAGAACCGTT",5,59.86,6,-4.84,2,1.5,1.27,0.03,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","TGACTGCATCTGCGCC",3,29.5,6.87,-3.97,0.28,1.5,1.13,0.02,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","TGACTGCGATTCTCAA",15,5.7,NA,NA,NA,NA,NA,NA,"stop","V37G L60E G83T A105* G116Y G196W",6
"lib2","SARS-CoV-2","TGACTGCGGCAAGAAT",3,0.16,NA,NA,NA,NA,NA,NA,"stop","P7L A33K R78S Y91* G117T",5
"lib2","SARS-CoV-2","TGACTGCTCGTATAAA",3,52.77,9.46,-1.38,0.12,1.94,1.07,0.01,">1 nonsynonymous","S36Y K56R F62T D98V S129N",5
"lib2","SARS-CoV-2","TGACTGGACTTTAACA",7,0.55,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGACTGGCCTAAAGCT",10,72.44,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","Q84P S113D",2
"lib2","SARS-CoV-2","TGACTGGCGGTTATAA",1,21.64,10.49,-0.35,0.04,2.93,1.04,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","TGACTGGCTTTGCGGG",2,32.05,9.66,-1.18,0.07,2.9,1.05,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","TGACTGGTCCGAACTT",9,51.5,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6Y G86S R127S F160L",4
"lib2","SARS-CoV-2","TGACTGTAAAGATCAA",2,81.15,9.2,-1.64,0.05,2.99,1.03,0,">1 nonsynonymous","P7S K56H G155M G166S T201C",5
"lib2","SARS-CoV-2","TGACTGTAACGTGTTG",4,3.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13F F47N N58M R73C T140S",5
"lib2","SARS-CoV-2","TGACTGTACTATTCAA",3,15.37,10.76,-0.08,0.08,2.89,1.15,0,">1 nonsynonymous","I28L G152S T201R",3
"lib2","SARS-CoV-2","TGACTGTATTCATTAC",2,35.45,10.91,0.08,0.1,2.88,1.14,0,"1 nonsynonymous","F62W",1
"lib2","SARS-CoV-2","TGACTGTGTCAACATT",1,16.97,10.94,0.1,0.09,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGACTGTTTACAGATC",2,22.19,10.15,-0.68,0.17,2.74,1.01,0.01,">1 nonsynonymous","N1G C6V",2
"lib2","SARS-CoV-2","TGACTTAACGATCCAC",4,0.91,NA,NA,NA,NA,NA,NA,"stop","G152*",1
"lib2","SARS-CoV-2","TGACTTAACTGGGACG",1,39.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S36E C61H N107F T201G",4
"lib2","SARS-CoV-2","TGACTTAAGGCTTTTA",31,551.37,10.39,-0.45,0.03,2.92,1.06,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TGACTTAATCTGTGAC",2,75.19,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K94N Y159K V173M",3
"lib2","SARS-CoV-2","TGACTTACACTACAAG",3,82.62,9.53,-1.31,0.05,2.89,1.06,0,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","TGACTTACATACGTGA",1,4.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51M V71K T100E",3
"lib2","SARS-CoV-2","TGACTTACATATTCCA",1,14.49,9.97,-0.86,0.13,2.43,1.18,0.01,">1 nonsynonymous","E10G N13S",2
"lib2","SARS-CoV-2","TGACTTACCCATGGGA",6,137.63,10.74,-0.09,0.05,2.92,1.08,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","TGACTTACGACAGACA",8,83.51,10.79,-0.05,0.04,2.93,1.08,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","TGACTTACGTTTCTAG",2,8.28,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C6S S41V K56C F126N F134S F185R",6
"lib2","SARS-CoV-2","TGACTTAGTGTTGTGT",1,31.81,10.25,-0.59,0.06,2.84,1.15,0,">1 nonsynonymous","R27K T63G F156M",3
"lib2","SARS-CoV-2","TGACTTATATGAAACT",11,2.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R D68P L95K S164L",4
"lib2","SARS-CoV-2","TGACTTATGATAGTTA",2,13.74,10.53,-0.31,0.11,2.91,1.08,0,">1 nonsynonymous","I2A L122E",2
"lib2","SARS-CoV-2","TGACTTATTTACCTCG",13,45.05,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","S19V C61F T148P",3
"lib2","SARS-CoV-2","TGACTTCAAGAAGAAG",4,15.01,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13K K94F",2
"lib2","SARS-CoV-2","TGACTTCATAGAACTG",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57N A81I K94F W106K R127S",5
"lib2","SARS-CoV-2","TGACTTCGAGAAAACG",13,280.63,10.81,-0.02,0.03,2.92,1.08,0,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","TGACTTCGCGGCAAAG",5,6.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64H V103Q G117S",3
"lib2","SARS-CoV-2","TGACTTCGTAGCCACA",5,102.5,10.56,-0.27,0.03,2.87,1.07,0,"1 nonsynonymous","F62N",1
"lib2","SARS-CoV-2","TGACTTCTAAAAACCG",1,10.35,9.4,-1.44,0.09,2.77,1.03,0,">1 nonsynonymous","A22F K87H E141C",3
"lib2","SARS-CoV-2","TGACTTCTATTCGAAC",2,0.65,NA,NA,NA,NA,NA,NA,"stop","G86F F99* I104F",3
"lib2","SARS-CoV-2","TGACTTCTGCTATGAA",5,169.17,10.35,-0.48,0.03,2.89,1.05,0,"1 nonsynonymous","A14H",1
"lib2","SARS-CoV-2","TGACTTCTGTAACTTT",13,98.82,6.25,-4.58,0.78,1.5,1.21,0.04,">1 nonsynonymous","G74L A81Y D90S",3
"lib2","SARS-CoV-2","TGACTTGAAATCATCA",14,294.84,10.71,-0.13,0.03,2.93,1.06,0,"1 nonsynonymous","T15E",1
"lib2","SARS-CoV-2","TGACTTGACCACACGT",3,13.26,10.75,-0.09,0.06,3,1.03,0,">1 nonsynonymous","I2T D98A",2
"lib2","SARS-CoV-2","TGACTTGCCGATTACC",17,88.17,9.29,-1.54,0.18,1.5,1.08,0.01,">1 nonsynonymous","P96W N171T T201I",3
"lib2","SARS-CoV-2","TGACTTGGTAATACTT",8,304.88,10.13,-0.71,0.04,2.8,1.03,0,">1 nonsynonymous","A42E A89P S139R",3
"lib2","SARS-CoV-2","TGACTTGTACTGCGAC",3,23.76,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","D112C E135L Y175F",3
"lib2","SARS-CoV-2","TGACTTGTGCCTTGCA",3,65.59,10.19,-0.64,0.04,2.92,1.03,0,">1 nonsynonymous","S53F P149F",2
"lib2","SARS-CoV-2","TGACTTTAAAAAACTC",2,65.09,6,-4.84,2,3,1.1,0,">1 nonsynonymous","R16I D75E D98Y S108A N120M Y143K",6
"lib2","SARS-CoV-2","TGACTTTAAAGCTTCG",14,339.36,10.76,-0.08,0.04,2.92,1.08,0,"1 nonsynonymous","N64F",1
"lib2","SARS-CoV-2","TGACTTTAAGATGTTT",2,87.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L125T P177Y",2
"lib2","SARS-CoV-2","TGACTTTACTCACGCT",1,1.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R Y143M",2
"lib2","SARS-CoV-2","TGACTTTATTGCAACC",2,44.44,8.86,-1.97,0.05,2.68,1.08,0,">1 nonsynonymous","D59M L125T F134T",3
"lib2","SARS-CoV-2","TGACTTTCAGAGTAAA",12,166.73,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","P82G G155E F167V",3
"lib2","SARS-CoV-2","TGACTTTGAAAGACAA",9,112.69,10.71,-0.13,0.04,2.9,1.04,0,"1 nonsynonymous","A42F",1
"lib2","SARS-CoV-2","TGACTTTGTTCAATAA",3,38.28,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","W23E K48L Y159N K198M",4
"lib2","SARS-CoV-2","TGACTTTTCCGCAAAT",2,50.45,10.2,-0.64,0.07,2.88,1.04,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","TGACTTTTTATTTACA",2,10.74,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","R124L L131H",2
"lib2","SARS-CoV-2","TGAGAAAAAATTACAT",4,10.03,6,-4.84,2,3,1.05,0,">1 nonsynonymous","A105N R127A P149F",3
"lib2","SARS-CoV-2","TGAGAAAAAGACTTTG",3,50.28,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","D68E G83T T201P",3
"lib2","SARS-CoV-2","TGAGAAAAAGTAGGCC",12,4.51,NA,NA,NA,NA,NA,NA,"stop","L60* E154R P197F",3
"lib2","SARS-CoV-2","TGAGAAAAGCCTTAAA",2,79.06,10.74,-0.1,0.05,2.87,1.09,0,"1 nonsynonymous","A192S",1
"lib2","SARS-CoV-2","TGAGAAAAGCGGTGAA",1,31.74,10.47,-0.37,0.07,2.98,1.06,0,">1 nonsynonymous","S36G N120L",2
"lib2","SARS-CoV-2","TGAGAAAAGGTTGTCT",1,27.68,10.81,-0.03,0.08,2.83,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGAAAATGCAGATT",16,282.68,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T55R W106E Q176G",3
"lib2","SARS-CoV-2","TGAGAAACAAGTTTTA",2,8.81,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D34Q Y91A F99W A105W K114I S200W",6
"lib2","SARS-CoV-2","TGAGAAACATCCAGTG",5,42.1,10.51,-0.32,0.05,2.94,1.06,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","TGAGAAACTTAAGTGA",1,1.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2S C6F S41A N58C D97A D112T L122Q T201P",8
"lib2","SARS-CoV-2","TGAGAAAGAGCTAGCC",9,134.32,10.12,-0.72,0.05,2.56,1.07,0,">1 nonsynonymous","S45Y D90K S129A",3
"lib2","SARS-CoV-2","TGAGAAATCAAGTCAA",8,196.94,8.98,-1.85,0.07,2.85,1.08,0,">1 nonsynonymous","V37L D90M E154Y",3
"lib2","SARS-CoV-2","TGAGAAATGGCACTTA",3,37.13,6.3,-4.54,0.31,2.3,1.13,0.01,">1 nonsynonymous","G86M S139A",2
"lib2","SARS-CoV-2","TGAGAAATTGTCTAAT",4,71.46,10.81,-0.02,0.06,3,1.04,0,"1 nonsynonymous","K114H",1
"lib2","SARS-CoV-2","TGAGAAATTTAACCAT",9,63.39,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N107S R127W R136A A192L T201A",5
"lib2","SARS-CoV-2","TGAGAACACATATTTC",9,46.2,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","V11T L60F Y91S F99S",4
"lib2","SARS-CoV-2","TGAGAACATAGAATTC",2,87.99,10.26,-0.58,0.06,2.65,1,0,">1 nonsynonymous","N13L P54T T55H L122T",4
"lib2","SARS-CoV-2","TGAGAACCGGCAAAAA",6,57.41,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","E10L A18T K56S G146E T148L Q176E",6
"lib2","SARS-CoV-2","TGAGAACGGGCCAGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M G86T P177L",3
"lib2","SARS-CoV-2","TGAGAACTACAAGGTG",4,20.31,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","Y93C D97T S129A",3
"lib2","SARS-CoV-2","TGAGAACTCGAAGCTG",7,0.73,NA,NA,NA,NA,NA,NA,"stop","V37* G86* P133S",3
"lib2","SARS-CoV-2","TGAGAACTTAACTATT",1,32.73,6.08,-4.75,0.79,1.5,1.15,0.02,">1 nonsynonymous","N13D F62N Y175S",3
"lib2","SARS-CoV-2","TGAGAACTTATATCTT",10,227.78,10.4,-0.44,0.03,2.89,1.04,0,">1 nonsynonymous","Y35F L57S I138H",3
"lib2","SARS-CoV-2","TGAGAAGAATCCCAAC",5,59.42,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","D59S L95R K198V",3
"lib2","SARS-CoV-2","TGAGAAGACATATAGA",2,24.56,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","R16T L57A A89V A145T P177L",5
"lib2","SARS-CoV-2","TGAGAAGACGATCAAT",9,124.78,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","P82F Y93L T148R",3
"lib2","SARS-CoV-2","TGAGAAGATAATTCGG",5,13.33,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","F8S A33T A89I N110D F160L",5
"lib2","SARS-CoV-2","TGAGAAGATACTACTT",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12S D68P G86S K128A",4
"lib2","SARS-CoV-2","TGAGAAGCAAGTGGAT",6,37.7,10.32,-0.52,0.07,2.77,1.04,0,"1 nonsynonymous","S139L",1
"lib2","SARS-CoV-2","TGAGAAGCAGAAAAAG",9,195.69,10.01,-0.82,0.06,2.53,1.09,0,">1 nonsynonymous","N64S V71A",2
"lib2","SARS-CoV-2","TGAGAAGCCGCCAAAG",2,8.85,6.67,-4.17,1.24,1.5,1.03,0.05,">1 nonsynonymous","G83Y F134P P169C",3
"lib2","SARS-CoV-2","TGAGAAGCGTCAGCAA",2,28.21,10.84,0,0.08,2.98,1.03,0,"1 nonsynonymous","R78K",1
"lib2","SARS-CoV-2","TGAGAAGCGTTTCCAA",7,4.34,NA,NA,NA,NA,NA,NA,"stop","K132M E154R S200*",3
"lib2","SARS-CoV-2","TGAGAAGCTAACGTAA",21,147.66,9.49,-1.35,0.09,1.92,1.08,0,">1 nonsynonymous","Q84R A89R",2
"lib2","SARS-CoV-2","TGAGAATAAAATCAAT",2,31.38,9.63,-1.2,0.05,2.95,1.05,0,">1 nonsynonymous","T85M G174Y",2
"lib2","SARS-CoV-2","TGAGAATAAAATTGAC",14,40.41,8.15,-2.68,0.28,1.5,1.1,0.03,">1 nonsynonymous","Y50C E141L Q168F",3
"lib2","SARS-CoV-2","TGAGAATACGTGACTG",4,27.13,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","Y35V Y91S A105C Y119C",4
"lib2","SARS-CoV-2","TGAGAATATAACTTAC",10,14.75,10.03,-0.81,0.24,2.25,1,0.03,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","TGAGAATATATTAATC",9,6.66,10.26,-0.57,0.16,2.63,1.04,0,">1 nonsynonymous","N24S A33C P82M L183S",4
"lib2","SARS-CoV-2","TGAGAATATCGAGAGT",7,37.45,6,-4.84,2,3,1.11,0,"1 nonsynonymous","V20F",1
"lib2","SARS-CoV-2","TGAGAATCAAATTCCC",3,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62N T100C G117C T140W C158K L183E",6
"lib2","SARS-CoV-2","TGAGAATCACTCCAAT",2,0.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGAGAATCCCAGATAA",7,113.8,10.76,-0.08,0.03,3,1.02,0,">1 nonsynonymous","N30G G146S",2
"lib2","SARS-CoV-2","TGAGAATGCGACAAGT",7,1.64,NA,NA,NA,NA,NA,NA,"stop","A14L D34N L122* K128G R136F",5
"lib2","SARS-CoV-2","TGAGAATGTAAACGTA",12,15.68,NA,NA,NA,NA,NA,NA,"stop","L60* R127V P169N",3
"lib2","SARS-CoV-2","TGAGAATTAACGCACA",3,15.48,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","A33V Q84K F167C",3
"lib2","SARS-CoV-2","TGAGAATTACTCGACG",4,13.38,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","F62S Y66H D137S F167S",4
"lib2","SARS-CoV-2","TGAGAATTGTCTAAAC",3,39.9,10.73,-0.1,0.02,2.94,1.09,0,"1 nonsynonymous","D98H",1
"lib2","SARS-CoV-2","TGAGAATTTACGACGG",3,24.2,6,-4.84,2,3,1.12,0,">1 nonsynonymous","D112R S139F",2
"lib2","SARS-CoV-2","TGAGACAAAATTCGTA",2,0.1,NA,NA,NA,NA,NA,NA,"stop","A33K G51R F62* F160H",4
"lib2","SARS-CoV-2","TGAGACACATGTTTAA",1,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y D90P Y119L S129F S184P",5
"lib2","SARS-CoV-2","TGAGACAGCCTTCAAA",9,181.36,10.81,-0.03,0.04,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAGACATCATATAAA",5,1.63,NA,NA,NA,NA,NA,NA,"stop","Q176S V194*",2
"lib2","SARS-CoV-2","TGAGACATGAAACGCG",3,46.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S69H Y143C F167P V173S",4
"lib2","SARS-CoV-2","TGAGACATGCGGTCCC",4,18.99,9.62,-1.21,0.15,1.99,1.08,0.01,">1 nonsynonymous","K56R I88T",2
"lib2","SARS-CoV-2","TGAGACATGTAATACG",3,38.77,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G83S C150Y",2
"lib2","SARS-CoV-2","TGAGACCAACATTGGT",3,61.11,10.92,0.09,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGACCCATGTTTTC",1,14.12,8.67,-2.16,0.27,1.5,1.03,0.05,">1 nonsynonymous","V11S K26M T100S",3
"lib2","SARS-CoV-2","TGAGACCTAAATAACC",2,75.93,10.72,-0.11,0.05,2.94,1.06,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","TGAGACCTCCGTACTA",1,10.26,10.57,-0.26,0.24,2.37,1,0.01,">1 nonsynonymous","N1L Y35Q",2
"lib2","SARS-CoV-2","TGAGACGAAAAAATCT",7,83.89,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A14I T46S K87I Y121L G172Y",5
"lib2","SARS-CoV-2","TGAGACGCTATGAATT",15,63.27,8.06,-2.78,0.44,1.5,1,0.07,">1 nonsynonymous","C6M G101Y F185T",3
"lib2","SARS-CoV-2","TGAGACGTAACTGGCA",6,125.14,10.75,-0.08,0.05,2.93,1.08,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","TGAGACGTCATGATTC",2,84.51,10.68,-0.16,0.04,2.96,1.05,0,">1 nonsynonymous","S41W F160A",2
"lib2","SARS-CoV-2","TGAGACTAAATACAAC",4,92.1,9.76,-1.07,0.1,2.09,1.06,0,">1 nonsynonymous","V11Q C61V S129R",3
"lib2","SARS-CoV-2","TGAGACTACATGTGAC",15,490.81,9.43,-1.4,0.06,2.2,1.06,0,">1 nonsynonymous","D112I L125F",2
"lib2","SARS-CoV-2","TGAGACTACGTGCCTT",21,158.12,10.8,-0.03,0.02,2.91,1.09,0,"1 nonsynonymous","S41N",1
"lib2","SARS-CoV-2","TGAGACTGAGCAAGAA",5,46.54,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G101Y F156M Y178S",3
"lib2","SARS-CoV-2","TGAGACTGTACAGCGA",4,35.98,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N64A G74R P133T R179D",4
"lib2","SARS-CoV-2","TGAGAGAAACACACCA",9,1.92,NA,NA,NA,NA,NA,NA,"stop","L5C T15* Q79R K94D",4
"lib2","SARS-CoV-2","TGAGAGAAAGCTAATT",5,163.92,7.35,-3.49,0.09,1.77,1.09,0,">1 nonsynonymous","G9E C150L",2
"lib2","SARS-CoV-2","TGAGAGAAATGAACGC",15,139.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","A33T N40F A105V G117D",4
"lib2","SARS-CoV-2","TGAGAGACATCCATCG",2,6.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S113H Y165D",2
"lib2","SARS-CoV-2","TGAGAGACCGACGGAA",10,45.16,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3S Y39K L95A D112L S200N",5
"lib2","SARS-CoV-2","TGAGAGAGAAAACACT",7,93.67,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S69V G86T N118L K199P",4
"lib2","SARS-CoV-2","TGAGAGAGCTCCTGCT",8,39.71,10.67,-0.16,0.19,2.7,1.08,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TGAGAGAGTTCCTTTA",8,7.4,NA,NA,NA,NA,NA,NA,"stop","L125* Q176W",2
"lib2","SARS-CoV-2","TGAGAGATATCAAAGT",9,53.36,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V77F G166L V173S V182E",4
"lib2","SARS-CoV-2","TGAGAGATATCTTAGA",5,148.45,9.85,-0.98,0.08,2.22,1.04,0,">1 nonsynonymous","L57A G83S",2
"lib2","SARS-CoV-2","TGAGAGATGAGCCGGG",2,29.07,10.27,-0.56,0.07,2.87,1.11,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","TGAGAGCAAAACCGGT",1,12.89,10.2,-0.64,0.05,3,1,0,">1 nonsynonymous","C6G R16K I72L",3
"lib2","SARS-CoV-2","TGAGAGCAACGTATCC",1,22.58,10.64,-0.19,0.06,2.89,1.11,0,">1 nonsynonymous","D98S S129I",2
"lib2","SARS-CoV-2","TGAGAGCCCTGACATG",3,13.89,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L5H A14Y Y91M N151I",4
"lib2","SARS-CoV-2","TGAGAGGATGCGGGAA",7,54.6,6.14,-4.69,0.71,1.5,1.2,0.01,">1 nonsynonymous","L95G V181E",2
"lib2","SARS-CoV-2","TGAGAGGCAATATGAT",7,54.08,6,-4.84,1.17,1.5,1.1,0.01,">1 nonsynonymous","N107V Y119L",2
"lib2","SARS-CoV-2","TGAGAGGGGCATACAC",3,16.54,6,-4.84,1.73,2.61,1.1,0.01,">1 nonsynonymous","D34G L57A T63Y G86K G172N P177I",6
"lib2","SARS-CoV-2","TGAGAGTAAACGGACT",3,42.71,8.5,-2.33,0.27,1.76,1.12,0.03,">1 nonsynonymous","Q144N Y175T",2
"lib2","SARS-CoV-2","TGAGAGTAAAGGTAAC",2,28.67,6,-4.84,2,1.5,1.15,0.06,">1 nonsynonymous","F17Q A89L E154I",3
"lib2","SARS-CoV-2","TGAGAGTAAATAAAAG",3,37.37,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L38P K48S N120W P191K",4
"lib2","SARS-CoV-2","TGAGAGTGCGTCCATA",3,12.06,6,-4.84,1.69,1.5,1.09,0.03,">1 nonsynonymous","C6D A89H G117L",3
"lib2","SARS-CoV-2","TGAGAGTGGATCTTGG",3,66.53,9.6,-1.24,0.09,2.1,1,0,">1 nonsynonymous","F12K P197N",2
"lib2","SARS-CoV-2","TGAGAGTGTGATTCTG",3,23.43,10.79,-0.04,0.07,2.98,1,0,"1 nonsynonymous","V153F",1
"lib2","SARS-CoV-2","TGAGAGTTCACCCACA",1,8.02,10.82,-0.02,0.05,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGATAAAATACATT",1,49.07,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C31K S69L S129P Y175R",4
"lib2","SARS-CoV-2","TGAGATAAAATTACAT",5,13.85,7.5,-3.33,0.27,1.78,1.07,0.02,">1 nonsynonymous","D75K K94L",2
"lib2","SARS-CoV-2","TGAGATAAAATTTATC",3,71.93,6.48,-4.36,0.33,1.5,1.12,0.01,"1 nonsynonymous","F167N",1
"lib2","SARS-CoV-2","TGAGATAAATTTTAAC",16,205.47,8.06,-2.78,0.11,1.71,1.11,0,">1 nonsynonymous","T55R R127G E154Y T201S",4
"lib2","SARS-CoV-2","TGAGATAAGAAGCTCC",3,0,NA,NA,NA,NA,NA,NA,"stop","L122* K128Q G174N",3
"lib2","SARS-CoV-2","TGAGATAAGGGATTAT",3,10.85,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y143N N151T",2
"lib2","SARS-CoV-2","TGAGATAAGTTTCAGC",1,80.2,9.18,-1.66,0.07,2.55,1.09,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","TGAGATACGTGAATTC",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84P D112T",2
"lib2","SARS-CoV-2","TGAGATATACCTAAAG",1,1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","TGAGATATCACGAGAC",1,21.45,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R27S L38H L95G S113A G166E Y175M",6
"lib2","SARS-CoV-2","TGAGATATTACACGGA",12,77.08,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","F70T K87Q I138Y",3
"lib2","SARS-CoV-2","TGAGATCAAATGCGGG",7,3.5,NA,NA,NA,NA,NA,NA,"stop","S45T K94A N109* S139* P149Q",5
"lib2","SARS-CoV-2","TGAGATCACAAATTCT",2,9.75,6,-4.84,2,3,1.09,0.02,">1 nonsynonymous","N4C A105H C158L Q168V",4
"lib2","SARS-CoV-2","TGAGATCATGAGAATG",3,22.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A89V N107T D112M R127A",4
"lib2","SARS-CoV-2","TGAGATCATGCTTAAA",1,10.25,6.47,-4.36,0.25,3,1.06,0,">1 nonsynonymous","R124N N157F",2
"lib2","SARS-CoV-2","TGAGATCCTCGACGTT",6,63.66,9.41,-1.42,0.18,1.5,1.05,0.02,">1 nonsynonymous","S41K W106N K198T",3
"lib2","SARS-CoV-2","TGAGATCGCAAAATGT",6,127.14,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y143G T170V T201N",3
"lib2","SARS-CoV-2","TGAGATCTACAGCTAT",1,12.12,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","P177R",1
"lib2","SARS-CoV-2","TGAGATGAAAAATCCT",7,78.96,10.68,-0.16,0.05,2.86,1.14,0,">1 nonsynonymous","G83S T201Y",2
"lib2","SARS-CoV-2","TGAGATGGATTTATAG",6,4.8,NA,NA,NA,NA,NA,NA,"stop","K48* D97L G152N K198N",4
"lib2","SARS-CoV-2","TGAGATGGCGTATTTA",3,49.42,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V71E F167L",2
"lib2","SARS-CoV-2","TGAGATGTAGATTAGT",4,33.54,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T15S Y50K G86R T140F",4
"lib2","SARS-CoV-2","TGAGATGTCAACACCA",10,0.02,NA,NA,NA,NA,NA,NA,"stop","Y35H C61* Y143V",3
"lib2","SARS-CoV-2","TGAGATTAGAGATGTA",5,66.62,10.76,-0.07,0.07,2.94,1.07,0,"1 nonsynonymous","D75A",1
"lib2","SARS-CoV-2","TGAGATTCAATCAAGC",8,2.76,NA,NA,NA,NA,NA,NA,"stop","T3S Y123L P149*",3
"lib2","SARS-CoV-2","TGAGATTGGCAAAACG",7,124.53,10.78,-0.05,0.02,2.98,1.03,0,"1 nonsynonymous","E10A",1
"lib2","SARS-CoV-2","TGAGATTTCTAGACCA",4,0.46,NA,NA,NA,NA,NA,NA,"stop","L5P G86S Y121* F156*",4
"lib2","SARS-CoV-2","TGAGATTTTTAGGAAA",9,0.34,NA,NA,NA,NA,NA,NA,"stop","E10F Y39S F62Y G83I N107L Q144W G166*",7
"lib2","SARS-CoV-2","TGAGCAAAAGATGATA",2,18.46,6,-4.84,2,3,1.14,0.01,"1 nonsynonymous","Y93D",1
"lib2","SARS-CoV-2","TGAGCAAAATACGTAA",6,91.45,10.74,-0.1,0.04,2.96,1.04,0,"1 nonsynonymous","G83A",1
"lib2","SARS-CoV-2","TGAGCAAAATTACAGC",3,23.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","V71Y D98E K198S",3
"lib2","SARS-CoV-2","TGAGCAAACAAATCTA",3,54.88,7.95,-2.89,0.11,1.88,1.07,0,">1 nonsynonymous","T15F K26M Y119W",3
"lib2","SARS-CoV-2","TGAGCAAACCAACACA",1,79.47,9.25,-1.59,0.05,2.9,1.11,0,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","TGAGCAAGATAGATAG",9,89.69,10.78,-0.06,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGCAATAGACCTTA",12,260.06,8.18,-2.66,0.14,1.76,1.07,0.01,">1 nonsynonymous","L5K L38S Y119T",3
"lib2","SARS-CoV-2","TGAGCAATAGTTCGAA",8,99.86,8.66,-2.18,0.13,1.95,1.08,0.01,">1 nonsynonymous","P7L N118F",2
"lib2","SARS-CoV-2","TGAGCACAACGCACTG",9,145.19,10.92,0.08,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGCACAAGTTTTGG",2,11.78,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","T15Y F44L K56V G86F C150Y G155V",6
"lib2","SARS-CoV-2","TGAGCACACCTTTGTC",2,62.28,10.89,0.06,0.06,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGCACAGAGTAATC",6,3.4,NA,NA,NA,NA,NA,NA,"stop","T3* A14G V20E K56D V77P",5
"lib2","SARS-CoV-2","TGAGCACCCCCGCTGA",6,104.63,10.27,-0.56,0.03,2.88,1.06,0,">1 nonsynonymous","L5H A42S A81E T148V",4
"lib2","SARS-CoV-2","TGAGCACCGCGCATGA",3,26.51,9.12,-1.72,0.09,2.96,1.04,0,">1 nonsynonymous","Y119N Y178I P197T",3
"lib2","SARS-CoV-2","TGAGCACGGCAACATT",4,6.45,10.02,-0.82,0.26,1.78,1.17,0.02,">1 nonsynonymous","L5R F17I A33T K199D",4
"lib2","SARS-CoV-2","TGAGCACTCTGCCATT",14,15.08,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","T15K K26L C49R A81M D98S Q144A G174W",7
"lib2","SARS-CoV-2","TGAGCAGAGGAAACGA",1,7.97,6.85,-3.98,0.4,1.96,1.12,0.03,">1 nonsynonymous","R25S L38S N120V",3
"lib2","SARS-CoV-2","TGAGCAGTTGGATATA",9,1.92,NA,NA,NA,NA,NA,NA,"stop","Y50* G86D K114W N120R V153N T201P",6
"lib2","SARS-CoV-2","TGAGCATATGCCAGTA",6,66.75,10.12,-0.72,0.08,2.57,1,0,">1 nonsynonymous","L5Y R127G",2
"lib2","SARS-CoV-2","TGAGCATATTTCTATT",1,20.99,10.54,-0.3,0.07,2.85,1.16,0,"1 nonsynonymous","S45N",1
"lib2","SARS-CoV-2","TGAGCATCCGCATGAA",3,88.47,10.69,-0.15,0.04,2.94,1.01,0,"1 nonsynonymous","P96S",1
"lib2","SARS-CoV-2","TGAGCATGTAACTCAA",12,170.25,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","S19V V37Y K132H",3
"lib2","SARS-CoV-2","TGAGCCACATATACGT",7,89.55,10.57,-0.26,0.04,2.92,1.07,0,">1 nonsynonymous","A22N D59L L122Q S129L",4
"lib2","SARS-CoV-2","TGAGCCACCCCCCAAA",6,61.53,10.36,-0.48,0.06,2.93,1.04,0,">1 nonsynonymous","V32E T100S",2
"lib2","SARS-CoV-2","TGAGCCACGAGCCCAA",2,44.21,10.75,-0.08,0.05,2.95,1.06,0,">1 nonsynonymous","P149I K199I",2
"lib2","SARS-CoV-2","TGAGCCACGATACTTG",12,69.17,8.47,-2.37,0.15,1.6,1.13,0.01,">1 nonsynonymous","A89Y Y121H V173M",3
"lib2","SARS-CoV-2","TGAGCCACGTAAGTGA",12,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13T S41R R78A G83S I88H A105P P149L",7
"lib2","SARS-CoV-2","TGAGCCAGGCACGAGG",2,14.14,6.11,-4.72,0.65,1.5,1.07,0.01,">1 nonsynonymous","C6F L122P",2
"lib2","SARS-CoV-2","TGAGCCAGTCATTTTG",2,49.12,7.74,-3.1,0.47,1.5,1.01,0.08,">1 nonsynonymous","P82L Y165L",2
"lib2","SARS-CoV-2","TGAGCCATATGACCAA",13,152.93,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","P7F S45C N64R C158I",4
"lib2","SARS-CoV-2","TGAGCCCAGTTCCGCA",4,15.62,9.93,-0.91,0.14,2.34,1,0.01,">1 nonsynonymous","C102M N120G",2
"lib2","SARS-CoV-2","TGAGCCCCATTATCCC",1,93.67,10.29,-0.55,0.05,2.93,1.1,0,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","TGAGCCCCATTTTTCT",6,205.95,10.79,-0.04,0.06,2.89,1.12,0,">1 nonsynonymous","N4R T201V",2
"lib2","SARS-CoV-2","TGAGCCCCGACTTATC",3,58.64,9.54,-1.29,0.09,1.93,1.05,0,">1 nonsynonymous","V77R L122C S129Y",3
"lib2","SARS-CoV-2","TGAGCCGACGATATGT",13,39.24,6.36,-4.47,0.35,1.5,1.09,0.01,">1 nonsynonymous","P96T G101S",2
"lib2","SARS-CoV-2","TGAGCCGAGTAACGAG",7,29.99,9.8,-1.03,0.07,2.01,1.05,0.01,">1 nonsynonymous","N1Q A22E D90V",3
"lib2","SARS-CoV-2","TGAGCCGGCATACCTT",6,84.53,10.39,-0.44,0.04,2.88,1.04,0,">1 nonsynonymous","F44S G196S",2
"lib2","SARS-CoV-2","TGAGCCTAACCGTAAC",10,246.99,8.43,-2.4,0.17,1.5,1.06,0.01,">1 nonsynonymous","Y21G K132A",2
"lib2","SARS-CoV-2","TGAGCCTAGACACATA",5,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113A F134S",2
"lib2","SARS-CoV-2","TGAGCCTATAAATTCT",9,85.31,10.61,-0.22,0.05,2.88,1.11,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","TGAGCCTGAAACCCGT",5,54.67,6.39,-4.45,0.62,1.5,1.25,0.03,">1 nonsynonymous","G9L F44K G83V",3
"lib2","SARS-CoV-2","TGAGCGAATGTGTTAC",3,32.19,10.66,-0.18,0.06,2.89,1.11,0,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","TGAGCGACCGTACGAG",1,0.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103Q P133H G152P",3
"lib2","SARS-CoV-2","TGAGCGAGAGCTGTTA",5,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W23G",1
"lib2","SARS-CoV-2","TGAGCGATATCAAAAT",5,92.89,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","R27F Y35V T55L G146K P169D P177Y",6
"lib2","SARS-CoV-2","TGAGCGATGAGGGTAT",2,31.73,10.78,-0.05,0.04,3,1.02,0,">1 nonsynonymous","P54I N64W L122M",3
"lib2","SARS-CoV-2","TGAGCGCGCTTTAAGG",8,51.12,6.36,-4.48,0.43,1.5,1.14,0.01,">1 nonsynonymous","F17M Y121C N151T",3
"lib2","SARS-CoV-2","TGAGCGCTACCATGAG",1,12.61,10.13,-0.71,0.11,2.56,1.02,0.01,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","TGAGCGTATGATTAGA",6,93.69,10.8,-0.03,0.05,2.93,1.08,0,"1 nonsynonymous","I2Y",1
"lib2","SARS-CoV-2","TGAGCTAACATCCAAA",1,45.44,10.21,-0.62,0.08,2.71,1.02,0,">1 nonsynonymous","T3F F134E",2
"lib2","SARS-CoV-2","TGAGCTAATATAGAAA",12,74.05,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I104R R124C",2
"lib2","SARS-CoV-2","TGAGCTAATCAACAGC",7,60.47,10.65,-0.19,0.06,2.94,1.08,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","TGAGCTACCACAACTA",7,27.77,10.7,-0.13,0.09,2.91,1.04,0,">1 nonsynonymous","G116W K199C",2
"lib2","SARS-CoV-2","TGAGCTAGAATTCATA",17,203.68,9.78,-1.05,0.06,2.08,1.04,0,">1 nonsynonymous","F44A A89G N130P",3
"lib2","SARS-CoV-2","TGAGCTCAAAACAGGC",4,57.09,10.73,-0.1,0.05,2.88,1.12,0,">1 nonsynonymous","A33F T100M",2
"lib2","SARS-CoV-2","TGAGCTCAGGGATAAA",4,51.11,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S108P A192T K198L",3
"lib2","SARS-CoV-2","TGAGCTGAAGAACCAA",6,18.57,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","P82Y S200E",2
"lib2","SARS-CoV-2","TGAGCTGATACGAGAA",12,99.28,9.21,-1.62,0.08,2.12,1.07,0,">1 nonsynonymous","C6W T55C C61L A145S",4
"lib2","SARS-CoV-2","TGAGCTGATTCGGTCG",7,143.86,9.68,-1.15,0.06,1.81,1.11,0,">1 nonsynonymous","T63F W106F P149H",3
"lib2","SARS-CoV-2","TGAGCTGCTTAAAATC",10,52.44,10.92,0.09,0.06,2.89,1.11,0,"1 nonsynonymous","T201P",1
"lib2","SARS-CoV-2","TGAGCTGTTTGATGCA",11,87.52,7.37,-3.46,0.31,1.5,1.13,0.03,">1 nonsynonymous","G9R A67T P133Q A192E",4
"lib2","SARS-CoV-2","TGAGCTTCTAGAGCTT",9,47.59,8.18,-2.66,0.21,1.55,1.12,0.02,">1 nonsynonymous","C6D F44Y D90L S184M",4
"lib2","SARS-CoV-2","TGAGGAAAAGATGTAA",7,25.41,10.38,-0.46,0.06,2.92,1.07,0,">1 nonsynonymous","T46N K114L",2
"lib2","SARS-CoV-2","TGAGGAACATATAATG",1,5.56,7.61,-3.22,0.23,2.62,1.04,0.01,">1 nonsynonymous","P96T N157S",2
"lib2","SARS-CoV-2","TGAGGAAGTACCGTAA",5,91.44,10.69,-0.15,0.05,2.89,1.09,0,">1 nonsynonymous","G83Y D90S",2
"lib2","SARS-CoV-2","TGAGGAATAGTTTAAA",5,71.72,10.73,-0.1,0.03,2.97,1.05,0,">1 nonsynonymous","R27N T55N F62T P149R",4
"lib2","SARS-CoV-2","TGAGGAATCGTAAACT",4,0,NA,NA,NA,NA,NA,NA,"stop","A33S G51* Y93R A145N G155P",5
"lib2","SARS-CoV-2","TGAGGAATTAGACGCA",2,1.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R N58C G116L",3
"lib2","SARS-CoV-2","TGAGGACCAGAGGGGA",4,17.08,8.94,-1.89,0.1,2.98,1.05,0,">1 nonsynonymous","N58T G117E",2
"lib2","SARS-CoV-2","TGAGGACCCTGTTACG",3,74.18,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I80A Y178S S200L",3
"lib2","SARS-CoV-2","TGAGGACCTACGGCCG",11,0.63,NA,NA,NA,NA,NA,NA,"stop","F47R I88R E135L N157* N171R L183N",6
"lib2","SARS-CoV-2","TGAGGACGAATACGAA",5,42.83,9.99,-0.85,0.1,2.53,1.14,0,">1 nonsynonymous","D34S L95M",2
"lib2","SARS-CoV-2","TGAGGACGATAACGTT",1,8.11,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","Y93C",1
"lib2","SARS-CoV-2","TGAGGACGCATTATCA",1,18.46,6.5,-4.33,0.34,1.5,1.11,0.01,">1 nonsynonymous","A42S G83F Y175I P197R",4
"lib2","SARS-CoV-2","TGAGGACGTTGGGATC",1,9.24,6,-4.84,2,1.5,1.25,0.04,"1 nonsynonymous","C49K",1
"lib2","SARS-CoV-2","TGAGGAGAAATCGTTA",4,61.45,10.69,-0.14,0.05,2.96,1.07,0,">1 nonsynonymous","I2S E154G",2
"lib2","SARS-CoV-2","TGAGGAGATATAGAGG",6,67.09,10.04,-0.8,0.07,2.73,1.01,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","TGAGGAGCCTCCCCCC",6,149.57,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86H Y123R G172M",3
"lib2","SARS-CoV-2","TGAGGAGTACTATCGC",7,1.98,NA,NA,NA,NA,NA,NA,"stop","G83D D90* G116S I138K",4
"lib2","SARS-CoV-2","TGAGGAGTAGCAGAGG",16,67.11,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G101T Y143M P161R",3
"lib2","SARS-CoV-2","TGAGGAGTTACCCGCG",9,3.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R S43F D59S",3
"lib2","SARS-CoV-2","TGAGGATAATACCTAA",2,26.04,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G86V F126K I142L",3
"lib2","SARS-CoV-2","TGAGGATCTTTCAGGG",16,177.6,7.56,-3.27,0.26,1.5,1.06,0.02,">1 nonsynonymous","L60R P96T Y119V",3
"lib2","SARS-CoV-2","TGAGGATGCAATCACT",3,190.97,10.02,-0.81,0.04,2.89,1.07,0,">1 nonsynonymous","E141K Y175H",2
"lib2","SARS-CoV-2","TGAGGATTCTTCGCAT",2,13.1,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A81I P133H Y165W",3
"lib2","SARS-CoV-2","TGAGGCACCTTAGAGC",7,38.85,6,-4.84,2,3,1.08,0,">1 nonsynonymous","R127H V182G",2
"lib2","SARS-CoV-2","TGAGGCAGGAAGTTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35* T55S I104V Y119R P169S P197S",6
"lib2","SARS-CoV-2","TGAGGCATTCCATAAC",9,34.62,6.22,-4.62,0.63,1.5,1.1,0.02,">1 nonsynonymous","F12S S19R G83Y Y123D S200W",5
"lib2","SARS-CoV-2","TGAGGCCAGTAACTTT",21,4.87,NA,NA,NA,NA,NA,NA,"stop","T15S S43Y D68E I88F E154V F167*",6
"lib2","SARS-CoV-2","TGAGGCCATCGATACG",5,28.06,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G74I S113F",2
"lib2","SARS-CoV-2","TGAGGCGACCCGTAAT",1,12.62,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A18I T63G P82S I88S D98Y G172V",6
"lib2","SARS-CoV-2","TGAGGCGCCAATAAAA",1,1.42,NA,NA,NA,NA,NA,NA,"stop","L57* V71M K94L P149L",4
"lib2","SARS-CoV-2","TGAGGCGCCTGATCAT",5,63.85,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","D90Y D112Q A192N",3
"lib2","SARS-CoV-2","TGAGGCGGAAGCGATT",7,78.96,9.76,-1.08,0.08,2.08,1.07,0,">1 nonsynonymous","T3V E135A G155M",3
"lib2","SARS-CoV-2","TGAGGCGTATAAGAAC",4,87.15,10.92,0.09,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAGGCTAAGCGTCCC",1,77.58,10.4,-0.44,0.04,2.92,1.05,0,"1 nonsynonymous","N13Y",1
"lib2","SARS-CoV-2","TGAGGCTCAGTACAAC",1,16.48,7.32,-3.52,0.27,1.5,1.11,0.02,">1 nonsynonymous","L57E A89C P149R",3
"lib2","SARS-CoV-2","TGAGGCTTGCAAACAT",1,23.15,10.71,-0.13,0.08,3,1.03,0,"1 nonsynonymous","T3N",1
"lib2","SARS-CoV-2","TGAGGCTTTACACCCA",1,9.35,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I88M N92T A105L P149L",4
"lib2","SARS-CoV-2","TGAGGGAATTACTTAC",3,9.69,6.17,-4.67,2,1.5,1.25,0.03,">1 nonsynonymous","D68W Q163I K198L",3
"lib2","SARS-CoV-2","TGAGGGCAAAGATGAA",2,30.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","I28K R127L",2
"lib2","SARS-CoV-2","TGAGGGCCTGAACGAC",2,0.91,NA,NA,NA,NA,NA,NA,"stop","L95N N120T T148G S184*",4
"lib2","SARS-CoV-2","TGAGGGCCTTTATAAA",3,36.32,9.05,-1.78,0.08,2.83,1.18,0,">1 nonsynonymous","T100M G174I",2
"lib2","SARS-CoV-2","TGAGGGCTAAGGTACC",4,22.53,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","V32F C61G V103H Y159S",4
"lib2","SARS-CoV-2","TGAGGGCTACAAATCA",4,20.37,6,-4.84,2,1.5,1.18,0.08,">1 nonsynonymous","T55F N118P G146R N151Y",4
"lib2","SARS-CoV-2","TGAGGGCTCCAACAAA",5,69.13,10.88,0.04,0.03,2.96,1.04,0,">1 nonsynonymous","N151F P197L",2
"lib2","SARS-CoV-2","TGAGGGTCCCACAAAT",1,33.23,6,-4.84,2,1.5,1.3,0.06,">1 nonsynonymous","S19E S69E K128R Y175R",4
"lib2","SARS-CoV-2","TGAGGGTGCATTCAGT",4,1.49,NA,NA,NA,NA,NA,NA,"stop","Y91D N118* R127G E135M N157G",5
"lib2","SARS-CoV-2","TGAGGGTTTGCAGTTT",2,66.25,10.57,-0.26,0.03,3,1,0,"1 nonsynonymous","F44M",1
"lib2","SARS-CoV-2","TGAGGTAACGATAGAT",3,76.99,10.88,0.04,0.05,2.88,1.06,0,">1 nonsynonymous","F62Y T85S",2
"lib2","SARS-CoV-2","TGAGGTAACTAAACTC",6,94.29,10.73,-0.11,0.05,2.88,1.09,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","TGAGGTACGGCGATAG",4,53.69,10.73,-0.11,0.05,2.91,1.08,0,"1 nonsynonymous","A192L",1
"lib2","SARS-CoV-2","TGAGGTAGACGCCGTA",2,35.01,10.46,-0.38,0.06,2.96,1,0,"1 nonsynonymous","V77M",1
"lib2","SARS-CoV-2","TGAGGTCAGAGTCCTA",9,262.02,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D90T P96S Q176D",3
"lib2","SARS-CoV-2","TGAGGTGGAAGGTCCC",2,10.1,9.2,-1.63,0.13,2.54,1.06,0.01,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","TGAGGTGTTTCGTCAA",5,28.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P7L T55I T63Q Y91F G101W",5
"lib2","SARS-CoV-2","TGAGGTTATGAGGCAT",1,35.14,8.34,-2.5,0.19,1.67,1.11,0.02,">1 nonsynonymous","F17T I138R",2
"lib2","SARS-CoV-2","TGAGGTTCGTTTGCGT",1,31.96,10.82,-0.01,0.07,2.98,1.01,0,">1 nonsynonymous","L122I P191H",2
"lib2","SARS-CoV-2","TGAGGTTTAAACACAA",6,1.23,NA,NA,NA,NA,NA,NA,"stop","T15* D59F",2
"lib2","SARS-CoV-2","TGAGTAAAAAGTACAT",2,21.92,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","L60E I80G G174N",3
"lib2","SARS-CoV-2","TGAGTAAAAATAGGGA",1,41.34,6.89,-3.95,0.26,1.5,1.12,0.01,">1 nonsynonymous","P7V P82M",2
"lib2","SARS-CoV-2","TGAGTAAACGATAAAA",19,267.07,10.85,0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTAAACGCCCTGT",7,135.79,10.13,-0.7,0.04,2.84,1.06,0,">1 nonsynonymous","T55C A81E",2
"lib2","SARS-CoV-2","TGAGTAACAAAGGATG",7,116.22,10.85,0.01,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTAACGAGAGAAA",15,263.39,10.81,-0.02,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTAACTAATTTGT",4,69.08,10.08,-0.76,0.09,2.39,1.04,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","TGAGTAACTCATATAG",3,26.32,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T46Y L125S P133T P161R V173L",5
"lib2","SARS-CoV-2","TGAGTAACTCTCAGCG",2,50.42,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","F44P L60R A67Y F99I",4
"lib2","SARS-CoV-2","TGAGTAAGCTAATTAG",1,9.97,10.29,-0.55,0.05,3,1.03,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","TGAGTAATAAATCTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9* P149L E186C",3
"lib2","SARS-CoV-2","TGAGTAATAGCATAGG",12,1.07,NA,NA,NA,NA,NA,NA,"stop","V32*",1
"lib2","SARS-CoV-2","TGAGTACAATATATAG",4,27.93,6.1,-4.74,0.92,1.5,1.11,0.02,">1 nonsynonymous","I2W S43R G86S N107A Y178S",5
"lib2","SARS-CoV-2","TGAGTACCTGAACCTT",7,75.44,10.86,0.03,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTACGAGGCGAGA",1,20.02,10.23,-0.6,0.08,2.91,1,0.01,">1 nonsynonymous","P7G Y178N P197G",3
"lib2","SARS-CoV-2","TGAGTACTAAAAAACC",1,0.34,NA,NA,NA,NA,NA,NA,"stop","G155* L162T",2
"lib2","SARS-CoV-2","TGAGTACTCATTGCCG",1,21.29,10.24,-0.6,0.08,2.82,1,0,">1 nonsynonymous","F12L C61F",2
"lib2","SARS-CoV-2","TGAGTACTGGTATAGA",3,0.62,NA,NA,NA,NA,NA,NA,"stop","C61K D90* L125M T201M",4
"lib2","SARS-CoV-2","TGAGTATAGAAAGACT",2,18.41,10.73,-0.1,0.08,2.97,1.03,0,"1 nonsynonymous","P197G",1
"lib2","SARS-CoV-2","TGAGTATGATAGTTCA",2,14.81,7.96,-2.88,0.27,1.95,1.15,0.02,">1 nonsynonymous","A42L L60T T85M N92S N118K",5
"lib2","SARS-CoV-2","TGAGTATGCTCGTGCG",5,60.44,10.01,-0.83,0.07,2.88,1.07,0,">1 nonsynonymous","N13C K87L P197W",3
"lib2","SARS-CoV-2","TGAGTATGGATATACC",11,63.42,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","N4S I88E A190T",3
"lib2","SARS-CoV-2","TGAGTATGGGTTCCAA",4,34.2,8.65,-2.19,0.12,1.5,1.07,0,">1 nonsynonymous","V52Y D98E Y121S",3
"lib2","SARS-CoV-2","TGAGTATTAATGCGAA",1,16.98,10.74,-0.1,0.08,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTATTCGGTTTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81G Y119L L188E",3
"lib2","SARS-CoV-2","TGAGTATTGTGGCTGC",4,0.4,NA,NA,NA,NA,NA,NA,"stop","S43I Y50D L60E T85P D98* Q144M",6
"lib2","SARS-CoV-2","TGAGTCAAACGTATCA",5,27.17,10.1,-0.73,0.11,2.36,1,0.01,">1 nonsynonymous","S29G N64I A81C",3
"lib2","SARS-CoV-2","TGAGTCAACCTACTAC",1,0,NA,NA,NA,NA,NA,NA,"stop","K26T T85L D98A S113W G155C F167* S184P",7
"lib2","SARS-CoV-2","TGAGTCAGCGAATAGT",1,24.18,10.74,-0.09,0.05,2.96,1.07,0,"1 nonsynonymous","P149T",1
"lib2","SARS-CoV-2","TGAGTCATATGCTTTA",7,2.03,NA,NA,NA,NA,NA,NA,"stop","L95* S139C",2
"lib2","SARS-CoV-2","TGAGTCATCGACAAAA",11,36.37,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D97T R179F",2
"lib2","SARS-CoV-2","TGAGTCATTCGTCCAT",1,13.43,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","N1D L95K I138R Q163G",4
"lib2","SARS-CoV-2","TGAGTCCATCATACAA",3,29.92,10.3,-0.54,0.05,3,1.03,0,"1 nonsynonymous","E10H",1
"lib2","SARS-CoV-2","TGAGTCCGACAGTTCA",2,11.11,9.03,-1.81,0.16,1.89,1.12,0.02,">1 nonsynonymous","C61A Y91N F134S",3
"lib2","SARS-CoV-2","TGAGTCCTATGGGCCG",7,118.61,9.66,-1.17,0.04,3,1.03,0,">1 nonsynonymous","I2K T85S S113T",3
"lib2","SARS-CoV-2","TGAGTCGACAATTGAC",12,162.63,6.24,-4.6,0.39,1.5,1.13,0.01,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","TGAGTCGCAATAATAA",1,7.27,10.78,-0.05,0.04,3,1,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","TGAGTCGGCGATTCTA",7,52.08,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V37P S41A W106Q N120S Y143C T148I C158W",7
"lib2","SARS-CoV-2","TGAGTCGTCTCGACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","P82V S129* E141N Y178P",4
"lib2","SARS-CoV-2","TGAGTCTAGACTAGCA",7,38,9.74,-1.09,0.12,2.17,1.06,0.01,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","TGAGTCTAGATAGCAT",1,27.66,10.33,-0.51,0.08,2.87,1,0,">1 nonsynonymous","Q84Y D97S",2
"lib2","SARS-CoV-2","TGAGTCTCGCATTTCT",13,161.34,8.6,-2.24,0.13,1.59,1.13,0.01,">1 nonsynonymous","V11Y A89Q S200F",3
"lib2","SARS-CoV-2","TGAGTCTTCAGTCAGA",18,176.08,10.82,-0.02,0.04,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGAGTCTTTCACGTAT",12,127.34,10.83,-0.01,0.06,2.91,1.09,0,"1 nonsynonymous","T3E",1
"lib2","SARS-CoV-2","TGAGTGAAACTTCAAT",14,165.24,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","V11L V32S V52K Q84R D90R G172R T201K",7
"lib2","SARS-CoV-2","TGAGTGAGAGAATTGA",2,67.27,10.91,0.07,0.07,2.85,1.09,0,"1 nonsynonymous","T55E",1
"lib2","SARS-CoV-2","TGAGTGAGTCCCACGT",1,24.73,9.18,-1.66,0.1,2.93,1.06,0,">1 nonsynonymous","F12L F126W",2
"lib2","SARS-CoV-2","TGAGTGATTTTAACAT",19,175.24,9.43,-1.4,0.02,2.97,1.04,0,"1 nonsynonymous","Y119V",1
"lib2","SARS-CoV-2","TGAGTGCAATGTCCAG",7,0.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F K114R F160S",3
"lib2","SARS-CoV-2","TGAGTGCACCGATTTA",2,75.9,10.78,-0.06,0.04,2.89,1.09,0,">1 nonsynonymous","T3R K199L",2
"lib2","SARS-CoV-2","TGAGTGCCGCTAATCA",2,8.88,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13C Y93G V153P T201A",4
"lib2","SARS-CoV-2","TGAGTGCCTAAACTCC",6,2.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","TGAGTGGAAGCCCCAT",5,96.23,10.74,-0.1,0.04,2.94,1.06,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TGAGTGTCATGGATTA",2,12.89,6,-4.84,1.05,3,1.12,0.01,">1 nonsynonymous","L5W C49E G74K N92W",4
"lib2","SARS-CoV-2","TGAGTTAAAATTAAAT",5,39.07,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S19R Q84L I88M N107M P133V K198Y",6
"lib2","SARS-CoV-2","TGAGTTAACTTTGTGA",2,46.03,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","V37A G172Q",2
"lib2","SARS-CoV-2","TGAGTTAATCATAAAT",2,19.67,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N13Y T55Y C61N N92A Y123L",5
"lib2","SARS-CoV-2","TGAGTTAATTAATAAC",9,129.3,7.02,-3.82,0.21,1.5,1.16,0.01,">1 nonsynonymous","I2V K56T N157V G174A",4
"lib2","SARS-CoV-2","TGAGTTACAATTTTCC",6,0.55,NA,NA,NA,NA,NA,NA,"stop","G83M N120R P149K Y178*",4
"lib2","SARS-CoV-2","TGAGTTACCCATGAAT",19,122.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R V37K L95M C195F",4
"lib2","SARS-CoV-2","TGAGTTACGAATACCC",8,5.6,NA,NA,NA,NA,NA,NA,"stop","Y66L G74T Y93* G101S K132I",5
"lib2","SARS-CoV-2","TGAGTTAGAAGACTAA",9,51.42,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","V103K P149T C150V",3
"lib2","SARS-CoV-2","TGAGTTAGCATGTCAG",6,114.36,10.26,-0.58,0.04,2.88,1.02,0,"1 nonsynonymous","S69F",1
"lib2","SARS-CoV-2","TGAGTTAGGCAATCTG",2,30.84,6.01,-4.83,1,1.76,1.12,0.02,">1 nonsynonymous","G9L A42H S69E T170L",4
"lib2","SARS-CoV-2","TGAGTTATATTTTTAG",3,0.25,NA,NA,NA,NA,NA,NA,"stop","L5I C49T Y123*",3
"lib2","SARS-CoV-2","TGAGTTATCCAAATGT",1,10.05,7.97,-2.87,0.32,1.5,1.04,0.03,">1 nonsynonymous","E10D V103A",2
"lib2","SARS-CoV-2","TGAGTTATCTAATAGT",8,99.94,9.79,-1.05,0.07,2.12,1.09,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TGAGTTATGCCCCTGT",5,5.62,NA,NA,NA,NA,NA,NA,"stop","A14V C61H V71* P133A G155R V173L",6
"lib2","SARS-CoV-2","TGAGTTATTTTGGTAG",6,79.79,6,-4.84,1.67,1.5,1.11,0,">1 nonsynonymous","G86C N107M C158P",3
"lib2","SARS-CoV-2","TGAGTTCACTGCAGCG",5,74.83,10.15,-0.69,0.07,2.62,1,0,">1 nonsynonymous","D98G F134L A190V",3
"lib2","SARS-CoV-2","TGAGTTCATCTCCTCA",3,29.15,9.8,-1.03,0.12,2.09,1.05,0.01,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","TGAGTTGAACGACGGC",6,0.24,NA,NA,NA,NA,NA,NA,"stop","G9* R25K D34A G116*",4
"lib2","SARS-CoV-2","TGAGTTGACTTCACTA",1,29.97,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D34T L38N I72V Y175N T201S",5
"lib2","SARS-CoV-2","TGAGTTGATTCATACA",4,102.22,9.82,-1.01,0.09,2.6,1.05,0,">1 nonsynonymous","N64H F160T Y178L",3
"lib2","SARS-CoV-2","TGAGTTGATTTTCACT",2,66.63,8.7,-2.14,0.1,2.5,1.07,0,">1 nonsynonymous","Q84I G117C",2
"lib2","SARS-CoV-2","TGAGTTGCTTAGACTG",3,33,8.69,-2.14,0.17,1.73,1.14,0.01,">1 nonsynonymous","V11N P149C",2
"lib2","SARS-CoV-2","TGAGTTGGGTTAAGCA",5,16.11,6.94,-3.89,0.34,1.5,1.02,0.02,">1 nonsynonymous","D59R T148M F156N L183C",4
"lib2","SARS-CoV-2","TGAGTTGTTGGCCTTC",1,50.13,10.26,-0.57,0.07,3,1.06,0,">1 nonsynonymous","G9T C61K F156R",3
"lib2","SARS-CoV-2","TGAGTTTCCATGAAAA",2,12.9,10.62,-0.22,0.07,2.91,1.08,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","TGAGTTTCTTAACTTA",3,64.62,10.94,0.1,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGAGTTTGAGTGTTGT",16,1,NA,NA,NA,NA,NA,NA,"stop","L5G G86N S147*",3
"lib2","SARS-CoV-2","TGAGTTTTACTAACTC",8,314.59,10.68,-0.16,0.02,2.95,1.06,0,">1 nonsynonymous","D97G N120R",2
"lib2","SARS-CoV-2","TGATAAAAAAATCTTC",5,70.71,6,-4.84,2,3,1.17,0,">1 nonsynonymous","E10I Y39A K87F G146K F160I",5
"lib2","SARS-CoV-2","TGATAAAAAGCACGAT",5,33.76,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","P54S Y91D N120P K128Y T201C",5
"lib2","SARS-CoV-2","TGATAAAACAAGGAGC",3,35.45,9.44,-1.4,0.07,2.23,1.01,0,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","TGATAAAACACAATCC",1,11.36,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T15S P54H L95P T148V K198S",5
"lib2","SARS-CoV-2","TGATAAAACTCCATAG",2,13.52,10.83,-0.01,0.07,3,1.03,0,"1 nonsynonymous","N64E",1
"lib2","SARS-CoV-2","TGATAAAAGCCCATCT",3,55.64,10.23,-0.6,0.05,2.9,1.09,0,">1 nonsynonymous","K87F D97E F160L",3
"lib2","SARS-CoV-2","TGATAAAAGGTATCGG",3,30.49,10.06,-0.78,0.08,2.51,1,0,">1 nonsynonymous","F44L F134N P149N",3
"lib2","SARS-CoV-2","TGATAAAATAATAGTG",1,81.96,10.38,-0.45,0.06,2.92,1.07,0,"1 nonsynonymous","K87N",1
"lib2","SARS-CoV-2","TGATAAACAATAGGAC",3,51.21,6,-4.84,2,1.5,1.25,0.07,">1 nonsynonymous","S45F G51P T85W E135T T193Y V194G",6
"lib2","SARS-CoV-2","TGATAAACACAGATGT",1,14.16,10.72,-0.11,0.18,2.86,1,0.02,">1 nonsynonymous","I2V D59L",2
"lib2","SARS-CoV-2","TGATAAACACCCTATT",6,144.76,10.8,-0.03,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATAAACACTCAAAT",4,58.15,8.42,-2.41,0.13,2.08,1.07,0.01,">1 nonsynonymous","G146T Y178L A192S",3
"lib2","SARS-CoV-2","TGATAAACAGATACTC",4,37.15,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D90C Y143D T201L",3
"lib2","SARS-CoV-2","TGATAAACCTTATCAT",1,17.6,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V32L F70E R124M T140F T201E",5
"lib2","SARS-CoV-2","TGATAAACTAGAAACC",5,3.92,NA,NA,NA,NA,NA,NA,"stop","I2Q A33* N120V",3
"lib2","SARS-CoV-2","TGATAAACTCAAAACT",6,268.14,10.16,-0.68,0.06,2.68,1.02,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","TGATAAACTCGAGCTT",3,30.42,10.79,-0.04,0.06,2.97,1.02,0,">1 nonsynonymous","N4S S53I",2
"lib2","SARS-CoV-2","TGATAAACTTTTAGAT",11,79.64,6,-4.84,2,1.5,1.25,0.04,"1 nonsynonymous","G101V",1
"lib2","SARS-CoV-2","TGATAAAGAATTTTAG",3,11.32,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L5Y F12A N24E S69G C150S",5
"lib2","SARS-CoV-2","TGATAAAGATATCTAA",3,60.3,9.81,-1.03,0.09,1.99,1.08,0,"1 nonsynonymous","L38E",1
"lib2","SARS-CoV-2","TGATAAAGATTTTGTA",2,18.9,10.1,-0.74,0.06,2.93,1,0,"1 nonsynonymous","Y35R",1
"lib2","SARS-CoV-2","TGATAAAGCACCACAA",6,105.44,10.76,-0.07,0.04,2.94,1.05,0,">1 nonsynonymous","N1E F44W K128T T193Y V194G",5
"lib2","SARS-CoV-2","TGATAAAGCTATAGCC",2,41.03,10.68,-0.15,0.04,2.99,1.03,0,"1 nonsynonymous","E10M",1
"lib2","SARS-CoV-2","TGATAAAGTCCACAGG",2,136,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y93P G116Q",2
"lib2","SARS-CoV-2","TGATAAAGTTGTATCC",1,18.23,10.71,-0.12,0.06,2.98,1.06,0,"1 nonsynonymous","K26A",1
"lib2","SARS-CoV-2","TGATAAATACATACCA",2,0,NA,NA,NA,NA,NA,NA,"stop","F17T Y50* D90N G174E S200V",5
"lib2","SARS-CoV-2","TGATAAATACGCCAGT",1,39.84,9.4,-1.44,0.19,1.72,1.19,0.01,"1 nonsynonymous","D68M",1
"lib2","SARS-CoV-2","TGATAAATAGTACTAA",5,71.41,8.89,-1.94,0.06,2.04,1.12,0,">1 nonsynonymous","D90Y N118Y",2
"lib2","SARS-CoV-2","TGATAAATCACCCAAG",8,153.52,10.98,0.14,0.05,2.91,1.1,0,"1 nonsynonymous","Y175W",1
"lib2","SARS-CoV-2","TGATAAATGAGTAATC",5,13.86,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","C6Y C61Y G86R Y91K P161Q",5
"lib2","SARS-CoV-2","TGATAAATGGATGACG",3,44.71,9.23,-1.6,0.13,2.27,1.09,0.01,">1 nonsynonymous","T100D E141V F156V",3
"lib2","SARS-CoV-2","TGATAAATTGCACGGA",15,156.35,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D112K L162V",2
"lib2","SARS-CoV-2","TGATAACAAACTATAT",4,48.45,6,-4.84,2,1.5,1.33,0.05,">1 nonsynonymous","V65G A89S V103Y",3
"lib2","SARS-CoV-2","TGATAACAAATTCTCA",7,3.74,NA,NA,NA,NA,NA,NA,"stop","S41G P96T T201*",3
"lib2","SARS-CoV-2","TGATAACAGAACGCAT",8,90.88,10.15,-0.68,0.03,2.89,1.03,0,">1 nonsynonymous","G51Q S147C",2
"lib2","SARS-CoV-2","TGATAACAGATTATAA",2,20.41,10.26,-0.58,0.06,2.9,1.01,0,">1 nonsynonymous","A14Y Y35F",2
"lib2","SARS-CoV-2","TGATAACATTAAATGC",1,58.54,10.86,0.02,0.07,2.9,1.09,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","TGATAACCAAGGCTGA",5,42.83,6.34,-4.49,0.55,1.5,1.18,0.02,">1 nonsynonymous","T55H F99K",2
"lib2","SARS-CoV-2","TGATAACCATATTTCC",5,2.49,NA,NA,NA,NA,NA,NA,"stop","N4V N64R N107* N171S",4
"lib2","SARS-CoV-2","TGATAACCCAGCTCAT",2,9.45,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44L G51R C102L I142S F160Y",5
"lib2","SARS-CoV-2","TGATAACCGCTCAAAC",3,96.89,9.04,-1.8,0.05,2.89,1.07,0,">1 nonsynonymous","I104L G117I",2
"lib2","SARS-CoV-2","TGATAACCTCTTGTGT",2,60.42,10.47,-0.37,0.05,2.95,1.07,0,">1 nonsynonymous","A18D Q84G F156P",3
"lib2","SARS-CoV-2","TGATAACGGGCTGCGG",4,10.12,7.64,-3.19,0.45,1.5,1,0.08,">1 nonsynonymous","C49K I104S S129F S139H",4
"lib2","SARS-CoV-2","TGATAACGGTACGACG",8,77.93,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","V71E V77L P82L F99L A105H R124L N157K",7
"lib2","SARS-CoV-2","TGATAACGTAAGCTAT",4,58.85,8.84,-2,0.07,2.87,1.14,0,">1 nonsynonymous","C61I G166H",2
"lib2","SARS-CoV-2","TGATAACTAAACAAGA",2,47.4,9.65,-1.19,0.15,1.94,1.16,0.01,">1 nonsynonymous","A89N L187C",2
"lib2","SARS-CoV-2","TGATAACTCCCAATCA",1,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V N92G",2
"lib2","SARS-CoV-2","TGATAACTCCCTTAAA",3,18.47,9.95,-0.89,0.12,2.61,1.06,0.01,">1 nonsynonymous","V52T L60I S129W",3
"lib2","SARS-CoV-2","TGATAACTTTCAACTT",12,91.45,6.96,-3.88,0.3,1.5,1.1,0.02,">1 nonsynonymous","G51Y N58F Q168M",3
"lib2","SARS-CoV-2","TGATAAGAAACTCCGT",14,82.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S41I K128Y Y165G V173H",4
"lib2","SARS-CoV-2","TGATAAGAATAATACG",4,99.8,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N120I F167S",2
"lib2","SARS-CoV-2","TGATAAGACAAAAAGG",3,0.1,NA,NA,NA,NA,NA,NA,"stop","P7K F12K C102D K114* R136L Q168A",6
"lib2","SARS-CoV-2","TGATAAGCAATCGTTG",2,63.91,10.35,-0.49,0.04,2.96,1.05,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","TGATAAGGGTAATGTA",4,35,7.2,-3.64,0.38,1.5,1.16,0.03,"1 nonsynonymous","I88S",1
"lib2","SARS-CoV-2","TGATAAGTATCTTAGC",3,27.22,8.77,-2.06,0.11,2.81,1.2,0,">1 nonsynonymous","F44L Y119M",2
"lib2","SARS-CoV-2","TGATAAGTTCAAATTG",1,19.82,8.21,-2.63,0.41,1.71,1.11,0.05,"1 nonsynonymous","R179Q",1
"lib2","SARS-CoV-2","TGATAATAAGCATAAC",1,5.44,11.13,0.3,0.12,2.85,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATAATACCACGCGT",2,11.84,10.01,-0.83,0.11,2.9,1,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","TGATAATACCCAGTGA",7,124.44,10.79,-0.05,0.05,2.87,1.08,0,"1 nonsynonymous","A18S",1
"lib2","SARS-CoV-2","TGATAATCACCAAAAC",8,101.25,10.82,-0.02,0.06,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","TGATAATCCAGTTCCC",4,71.74,8.06,-2.78,0.19,1.5,1.13,0.01,"1 nonsynonymous","R25V",1
"lib2","SARS-CoV-2","TGATAATTAAAAAGAA",4,29.46,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11T G83F R124C P133G S139A",5
"lib2","SARS-CoV-2","TGATACAAACGTTAAT",2,34.8,10.79,-0.05,0.06,2.9,1.09,0,"1 nonsynonymous","E154S",1
"lib2","SARS-CoV-2","TGATACAAATGCATGT",29,296.06,10.22,-0.62,0.03,2.88,1.03,0,">1 nonsynonymous","V11L F47I T140M L187Q",4
"lib2","SARS-CoV-2","TGATACAACAGTTTTA",2,20.54,6,-4.84,2,3,1.09,0,">1 nonsynonymous","C31S R73G L95T L131W",4
"lib2","SARS-CoV-2","TGATACAAGAGGGTAA",21,274.32,10.44,-0.4,0.03,2.91,1.07,0,">1 nonsynonymous","N24S N40Y C61V E141T",4
"lib2","SARS-CoV-2","TGATACAATAGGGAAG",3,45.72,10.54,-0.3,0.05,2.92,1.08,0,">1 nonsynonymous","Y121M Q168R",2
"lib2","SARS-CoV-2","TGATACAATGCCAAGT",1,5.13,6,-4.84,2,1.5,1,0,">1 nonsynonymous","F44V T55L I88R",3
"lib2","SARS-CoV-2","TGATACACACGTATCG",22,349.62,10.85,0.01,0.04,2.95,1.06,0,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","TGATACACAGTTAAGG",2,54.7,10.86,0.03,0.06,2.88,1.13,0,"1 nonsynonymous","R27K",1
"lib2","SARS-CoV-2","TGATACACCTGTAGAT",7,51.36,9.83,-1.01,0.05,2.06,1.05,0,">1 nonsynonymous","T46L Q84E N171C V182I",4
"lib2","SARS-CoV-2","TGATACAGAAGCTAAC",9,57.01,8.48,-2.36,0.24,1.5,1.02,0.03,">1 nonsynonymous","R16Y Q84M W106A E135T E154T",5
"lib2","SARS-CoV-2","TGATACAGACTTTTTA",4,160.46,10.8,-0.03,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATACAGCAAAGAAT",2,52.09,10.34,-0.5,0.06,2.89,1.07,0,"1 nonsynonymous","Y66K",1
"lib2","SARS-CoV-2","TGATACAGGTGGCCAA",1,43.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","TGATACATAGATCTAA",7,105.54,9.16,-1.68,0.1,1.84,1.07,0,">1 nonsynonymous","N107G L122E S139A",3
"lib2","SARS-CoV-2","TGATACATCTATTAGG",3,39.65,6.06,-4.78,0.72,3,1.16,0.01,">1 nonsynonymous","Y35H C61Y S113L Y119S",4
"lib2","SARS-CoV-2","TGATACCAACAACACA",9,85.22,6,-4.84,2,3,1.13,0,">1 nonsynonymous","S36M V52D L57T Y119I P133D T140P",6
"lib2","SARS-CoV-2","TGATACCAGTAGAGTT",1,7.33,9.32,-1.51,0.22,2.44,1.18,0.01,">1 nonsynonymous","R16V G83D D98S F156L",4
"lib2","SARS-CoV-2","TGATACCCGTGTTTGT",5,17.41,6,-4.84,1.64,3,1.23,0.01,">1 nonsynonymous","N13Y S41T D68Q",3
"lib2","SARS-CoV-2","TGATACCGCCAAACCT",6,169.76,10.59,-0.25,0.05,2.88,1.04,0,"1 nonsynonymous","V77I",1
"lib2","SARS-CoV-2","TGATACCGGAAAACAG",2,55.01,11,0.17,0.04,2.96,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TGATACCTAACTAGAG",3,2.6,NA,NA,NA,NA,NA,NA,"stop","Y39E F44L K56* D97C",4
"lib2","SARS-CoV-2","TGATACCTAGAAAGGA",3,39,8.18,-2.66,0.21,2.44,1.2,0.02,">1 nonsynonymous","Y119T F126T T148L",3
"lib2","SARS-CoV-2","TGATACCTTCGCCAAA",1,11.31,6.06,-4.77,1.28,3,1.27,0.03,"1 nonsynonymous","G101D",1
"lib2","SARS-CoV-2","TGATACGAACCCAATC",2,44.42,9.88,-0.96,0.09,2.5,1.08,0,">1 nonsynonymous","S45L P149L",2
"lib2","SARS-CoV-2","TGATACGAAGGCCTCA",6,0,NA,NA,NA,NA,NA,NA,"stop","F8G Y50* Y119E",3
"lib2","SARS-CoV-2","TGATACGACCTTGACA",8,40.52,6.56,-4.28,0.56,1.5,1.15,0.05,">1 nonsynonymous","L5I T15R N30L L38R V65T R136L S147R V181G",8
"lib2","SARS-CoV-2","TGATACGGATATAGAA",10,47.84,6.31,-4.53,0.51,1.5,1.23,0.01,">1 nonsynonymous","A33V P133E Q176L T201M",4
"lib2","SARS-CoV-2","TGATACGGGATAAGAA",3,19.16,7.33,-3.51,0.27,1.5,1.02,0.02,">1 nonsynonymous","V32R D97L D112E Y119L T201R",5
"lib2","SARS-CoV-2","TGATACTAACCACATC",1,4.26,NA,NA,NA,NA,NA,NA,"stop","V32R N40* T46V",3
"lib2","SARS-CoV-2","TGATACTAGATACATA",2,25.37,10.12,-0.71,0.09,2.89,1.14,0.01,">1 nonsynonymous","E10S L125G",2
"lib2","SARS-CoV-2","TGATACTATAATTACT",6,109.74,10.85,0.01,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATACTGACACAACT",6,172.8,10.63,-0.21,0.05,2.89,1.08,0,">1 nonsynonymous","K87T P197T",2
"lib2","SARS-CoV-2","TGATACTGCACTACAC",2,39.78,8.62,-2.22,0.07,2.67,1.12,0,">1 nonsynonymous","V37A V65L D97L F134Y G146V C195F",6
"lib2","SARS-CoV-2","TGATACTTACTATTGG",8,10.69,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","Y35Q I88S E186I",3
"lib2","SARS-CoV-2","TGATACTTATGACTCG",1,2.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16I I104G",2
"lib2","SARS-CoV-2","TGATACTTCTAATCCA",1,1.31,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y50P",1
"lib2","SARS-CoV-2","TGATAGAAATCCAAAC",4,31.2,10.32,-0.51,0.06,2.79,1.04,0,">1 nonsynonymous","G83M Y91C T201M",3
"lib2","SARS-CoV-2","TGATAGAAGTTTAAAG",1,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S D112F",2
"lib2","SARS-CoV-2","TGATAGAATCAAAATT",3,28.23,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","T63S A81S N107F N120K F134L F160C",6
"lib2","SARS-CoV-2","TGATAGACAAACAAGT",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L C61Y G83I K87M T100P N151Y",6
"lib2","SARS-CoV-2","TGATAGACAAGGCCGT",2,0.02,NA,NA,NA,NA,NA,NA,"stop","G9T W23* A105L",3
"lib2","SARS-CoV-2","TGATAGACCTTAACCC",4,22.97,10.87,0.03,0.06,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TGATAGACGAATAAGA",11,149.08,6,-4.84,2,3,1.17,0,">1 nonsynonymous","N107H Y175Q",2
"lib2","SARS-CoV-2","TGATAGACGACCGTTT",3,12.5,7.02,-3.81,0.46,1.5,1.21,0.05,">1 nonsynonymous","Y50R D59C S200C",3
"lib2","SARS-CoV-2","TGATAGAGGATGCTAG",1,35.06,6.32,-4.52,0.73,1.5,1.21,0.03,">1 nonsynonymous","A14V N24R D90G D112K E135A",5
"lib2","SARS-CoV-2","TGATAGAGGGAGCCAG",1,26.37,10.08,-0.75,0.1,2.86,1.18,0,">1 nonsynonymous","S45K K87T",2
"lib2","SARS-CoV-2","TGATAGATCCACAAAA",4,100.06,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","K56S G172L S184R",3
"lib2","SARS-CoV-2","TGATAGCAAATAACCA",12,244.18,7.04,-3.79,0.29,1.5,1.11,0.02,">1 nonsynonymous","W106L N157H K199S",3
"lib2","SARS-CoV-2","TGATAGCAACTTATGA",6,139.09,10.52,-0.32,0.04,2.97,1.02,0,">1 nonsynonymous","S41K F156M Q163A A190T",4
"lib2","SARS-CoV-2","TGATAGCATAATTAGC",8,57.32,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12L S19K N157I",3
"lib2","SARS-CoV-2","TGATAGCATCTTACAC",16,41.33,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","F47D Q84N L122R D137Y",4
"lib2","SARS-CoV-2","TGATAGCTCCTTATTC",2,0,NA,NA,NA,NA,NA,NA,"stop","I2K C61A N107Y N120S I142S F167* S200P",7
"lib2","SARS-CoV-2","TGATAGGACAATACAG",6,97.14,10.58,-0.25,0.04,2.91,1.08,0,">1 nonsynonymous","Y35L G174A",2
"lib2","SARS-CoV-2","TGATAGGACCCGGCTG",7,3.39,NA,NA,NA,NA,NA,NA,"stop","G146K N151*",2
"lib2","SARS-CoV-2","TGATAGGACTATTAAT",3,56.06,10.47,-0.36,0.06,2.93,1.02,0,"1 nonsynonymous","G152S",1
"lib2","SARS-CoV-2","TGATAGGCGATGAGAG",22,207.94,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S113P Y119L T148I V173H",4
"lib2","SARS-CoV-2","TGATAGGGAAGTTCAA",2,77.13,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y121L A145R P177T",3
"lib2","SARS-CoV-2","TGATAGGGATGCTTCT",3,13.78,9.12,-1.72,0.35,1.5,1.02,0.07,"1 nonsynonymous","V20G",1
"lib2","SARS-CoV-2","TGATAGGTACCACTTA",10,20.11,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","T3K G9A R16K G83P V103M Q168M",6
"lib2","SARS-CoV-2","TGATAGGTGACTCACA",2,30.42,10.95,0.12,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATAGTATATCATAT",4,24.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9E P82K S129P",3
"lib2","SARS-CoV-2","TGATAGTCGGTAAACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7I R127T",2
"lib2","SARS-CoV-2","TGATAGTGAGCACGCC",9,4.06,NA,NA,NA,NA,NA,NA,"stop","P7* I72Y T85S",3
"lib2","SARS-CoV-2","TGATAGTGATGCGAAA",4,44.99,8.71,-2.13,0.1,2.9,1.05,0,">1 nonsynonymous","K87L N107M",2
"lib2","SARS-CoV-2","TGATAGTGGTGACAGG",1,122.7,10.9,0.07,0.06,2.88,1.1,0,">1 nonsynonymous","V37F P149I",2
"lib2","SARS-CoV-2","TGATAGTGGTGCTATA",2,21.27,9.61,-1.22,0.1,2.86,1.1,0.01,">1 nonsynonymous","A18P T85G T170H G196V",4
"lib2","SARS-CoV-2","TGATAGTGTATAGCAA",3,34.06,6,-4.84,1.74,1.5,1.16,0.01,">1 nonsynonymous","C6S N24T L38V D90F G116Q T140K F160E",7
"lib2","SARS-CoV-2","TGATAGTGTGAGACGC",3,24.57,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","C61L I88Y I104F",3
"lib2","SARS-CoV-2","TGATAGTTCTGACCCG",7,122.98,10.49,-0.35,0.04,2.93,1.04,0,">1 nonsynonymous","I2N P96N",2
"lib2","SARS-CoV-2","TGATAGTTGTTTACCA",12,1.06,NA,NA,NA,NA,NA,NA,"stop","C102L G116* F156K",3
"lib2","SARS-CoV-2","TGATAGTTTTTTCCGA",4,78.63,9.89,-0.95,0.05,2.88,1.11,0,"1 nonsynonymous","L125P",1
"lib2","SARS-CoV-2","TGATATAAAAAGAAAA",7,115.38,10.22,-0.61,0.03,2.92,1.08,0,">1 nonsynonymous","L5T S41A F62P D97S F156P",5
"lib2","SARS-CoV-2","TGATATAAACTCCTAA",1,14.72,10.88,0.04,0.04,3,1.02,0,"1 nonsynonymous","K199W",1
"lib2","SARS-CoV-2","TGATATAAAGCTAGAA",15,70.99,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","I2G N58M L95R T170L Y178L",5
"lib2","SARS-CoV-2","TGATATACAAAGGCGA",2,26.44,10.7,-0.13,0.04,2.98,1.05,0,"1 nonsynonymous","N120V",1
"lib2","SARS-CoV-2","TGATATACAGTGATGA",11,104.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10L S19G N107G G117P",4
"lib2","SARS-CoV-2","TGATATACGAGTGGAA",7,2.28,NA,NA,NA,NA,NA,NA,"stop","A81W G86* K94T V103T",4
"lib2","SARS-CoV-2","TGATATAGGAGCCCGG",2,11.54,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D59T T100P D137L",3
"lib2","SARS-CoV-2","TGATATAGTTAAATAC",14,356.95,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","S53A P82F I138F",3
"lib2","SARS-CoV-2","TGATATATACTTAACA",3,35.98,8.92,-1.92,0.28,1.5,1.04,0.03,">1 nonsynonymous","S36L P96S N120E F167Y",4
"lib2","SARS-CoV-2","TGATATATGTGGCCCA",3,49.5,8.66,-2.18,0.08,2.95,1.1,0,">1 nonsynonymous","S41F K87I E154Y T201K",4
"lib2","SARS-CoV-2","TGATATCAATTTGGCT",7,79.69,10.87,0.03,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATATCACGCTCCTC",1,17.77,8.95,-1.88,0.21,2.92,1.13,0.01,">1 nonsynonymous","V32G E154Y",2
"lib2","SARS-CoV-2","TGATATCCCGGTTCAA",14,16.71,10.05,-0.79,0.17,2.9,1.15,0.01,"1 nonsynonymous","Y66H",1
"lib2","SARS-CoV-2","TGATATCCTCAAGTAC",8,133.25,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R127L N157W Q168N S184I",4
"lib2","SARS-CoV-2","TGATATCCTGAGGCTT",1,9.67,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F8L S19L I88A Y175R",4
"lib2","SARS-CoV-2","TGATATCGACGTACCC",5,121.25,9.1,-1.74,0.06,2.95,1.06,0,">1 nonsynonymous","G9N F47L Y119A",3
"lib2","SARS-CoV-2","TGATATCGATGTTACA",3,26.73,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","Y39S L60P I88R D97Q P169L",5
"lib2","SARS-CoV-2","TGATATCTACACTAAC",16,202.28,7.66,-3.18,0.18,1.5,1.09,0.01,">1 nonsynonymous","V77K I104L L125V",3
"lib2","SARS-CoV-2","TGATATCTACCCTCTG",3,10.48,10.97,0.13,0.07,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATATGAACAAAACA",1,32.11,10.9,0.07,0.1,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATATGAAGGCTCGC",2,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58L Y143G",2
"lib2","SARS-CoV-2","TGATATGAATAATGTG",6,55.38,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","L5P G83P Y91R T148Y",4
"lib2","SARS-CoV-2","TGATATGATTGTTATT",6,43.47,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","G9A Y93I L183Y",3
"lib2","SARS-CoV-2","TGATATGCGTACAGTA",26,310.9,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R16S G86C Q144E F167E",4
"lib2","SARS-CoV-2","TGATATGCTGGAGACC",7,139.26,10.27,-0.57,0.05,2.64,1.09,0,">1 nonsynonymous","K26S Y123R",2
"lib2","SARS-CoV-2","TGATATGGATTGCGAC",17,305.71,9.98,-0.86,0.06,2.48,1.05,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","TGATATGTCAACACCT",5,153.85,10.81,-0.02,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATATTAACACTCCC",7,107.15,10.82,-0.02,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATATTACGCGAATT",2,150.39,10.69,-0.15,0.03,2.95,1.04,0,">1 nonsynonymous","K87R E154S",2
"lib2","SARS-CoV-2","TGATATTGCAACCAGT",7,69.67,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R25G Y50K Q84R V103M",4
"lib2","SARS-CoV-2","TGATATTTGAACCCTG",2,7.44,NA,NA,NA,NA,NA,NA,"stop","N4L S41* Y175E",3
"lib2","SARS-CoV-2","TGATATTTTTAGCACT",2,17.66,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6A T15F S36L N92G",4
"lib2","SARS-CoV-2","TGATCAAAATAAAAAC",5,22.24,7.66,-3.17,0.37,1.5,1.18,0.05,">1 nonsynonymous","G9Y K48G N92W",3
"lib2","SARS-CoV-2","TGATCAAACCCATTAA",5,22.81,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L60H D68W V103A V153I Q176P",5
"lib2","SARS-CoV-2","TGATCAAAGACCCCTG",2,27.08,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D34T V77G N107Y R127V",4
"lib2","SARS-CoV-2","TGATCAAAGCAAGTAC",4,75.68,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","I138L P177R",2
"lib2","SARS-CoV-2","TGATCAAAGTTATGAC",8,126.77,10.72,-0.12,0.04,2.87,1.16,0,">1 nonsynonymous","S43Y G196S",2
"lib2","SARS-CoV-2","TGATCAAAGTTCCGCG",4,92.85,10.24,-0.59,0.04,2.84,1.05,0,">1 nonsynonymous","C61N Y91K",2
"lib2","SARS-CoV-2","TGATCAAATAGGCGGA",1,60.71,6,-4.84,2,3,1.13,0,"1 nonsynonymous","R179Y",1
"lib2","SARS-CoV-2","TGATCAACAGAGAATT",2,12.99,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F99Q I104L K114P K199T",4
"lib2","SARS-CoV-2","TGATCAACTGACCGTA",4,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P96Q S139D G146S S184F P191T",6
"lib2","SARS-CoV-2","TGATCAAGAATTAACG",9,93.06,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G51V N110I P161L",3
"lib2","SARS-CoV-2","TGATCAAGAGCCAATA",27,370.7,10.54,-0.3,0.02,2.91,1.07,0,">1 nonsynonymous","I2R I138P",2
"lib2","SARS-CoV-2","TGATCAAGATTTAATG",1,0,NA,NA,NA,NA,NA,NA,"stop","I28Y N118S F126*",3
"lib2","SARS-CoV-2","TGATCAAGGGCTCAGT",7,30.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G74W D98G S113V S129P G155L",5
"lib2","SARS-CoV-2","TGATCAAGTACTCAAT",7,121.2,10,-0.84,0.05,2.89,1.04,0,">1 nonsynonymous","N64S K87C D98L",3
"lib2","SARS-CoV-2","TGATCAAGTGGAAAAG",2,12.44,6.67,-4.16,0.15,2.1,1.02,0,">1 nonsynonymous","L38M S43P S113F",3
"lib2","SARS-CoV-2","TGATCACACGCTAAAA",4,0.35,NA,NA,NA,NA,NA,NA,"stop","N40T G86K L95M V103S Y159* C195H",6
"lib2","SARS-CoV-2","TGATCACATGATGTAA",4,31.25,8.03,-2.81,0.12,1.6,1.06,0.01,">1 nonsynonymous","N40A L60A Y119R V180M",4
"lib2","SARS-CoV-2","TGATCACCATAATGAG",1,1.71,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","TGATCACCATACGGTG",3,31.61,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L38S D68R V77W",3
"lib2","SARS-CoV-2","TGATCACGGCCTGATA",4,38.59,10.25,-0.59,0.1,2.77,1.08,0,">1 nonsynonymous","P133Y V153M",2
"lib2","SARS-CoV-2","TGATCACTTATTATAA",11,64.44,6,-4.84,1.03,3,1.22,0.01,">1 nonsynonymous","Y35K C150Y L183S",3
"lib2","SARS-CoV-2","TGATCAGAGAATGTAT",18,2.79,NA,NA,NA,NA,NA,NA,"stop","A33K G116M N157*",3
"lib2","SARS-CoV-2","TGATCAGCAAGCCAAC",28,624.18,7.37,-3.46,0.06,1.79,1.12,0,"1 nonsynonymous","C150N",1
"lib2","SARS-CoV-2","TGATCAGCATAACTGG",5,84.58,10.82,-0.02,0.04,2.89,1.13,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","TGATCAGGAGAATGTA",3,34.73,10.84,0,0.04,2.98,1.02,0,">1 nonsynonymous","F62T A192I",2
"lib2","SARS-CoV-2","TGATCAGGCGGGATTA",5,91.74,10.38,-0.46,0.04,2.91,1.02,0,">1 nonsynonymous","A81T S200C",2
"lib2","SARS-CoV-2","TGATCATAATATGGTT",1,31.78,10.68,-0.15,0.04,2.92,1.09,0,"1 nonsynonymous","V65F",1
"lib2","SARS-CoV-2","TGATCATATTCCTCAC",2,33.46,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","W23M L95S C102W",3
"lib2","SARS-CoV-2","TGATCATCACACGACA",1,0,NA,NA,NA,NA,NA,NA,"stop","N13I V37* V103H F156L S164L",5
"lib2","SARS-CoV-2","TGATCATCAGCAAACA",4,38.2,8.34,-2.49,0.26,1.5,1.11,0.02,">1 nonsynonymous","S19R Y35M T55G R73Q",4
"lib2","SARS-CoV-2","TGATCATCCCAGCCAG",3,23.93,8.22,-2.62,0.3,1.75,1.16,0.04,">1 nonsynonymous","T85P A105T L122C F160T",4
"lib2","SARS-CoV-2","TGATCATCTCCACATT",6,46.81,8.66,-2.18,0.17,1.5,1.03,0.01,"1 nonsynonymous","K94E",1
"lib2","SARS-CoV-2","TGATCATGAAACGAAA",22,2.93,NA,NA,NA,NA,NA,NA,"stop","P133*",1
"lib2","SARS-CoV-2","TGATCATGCCCCCACA",1,7.18,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","G86F D98E Q176R",3
"lib2","SARS-CoV-2","TGATCATTAGGCCGCA",6,41.12,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G51M A89L Y123V",3
"lib2","SARS-CoV-2","TGATCCAACGAAGAAG",4,86.2,8.77,-2.07,0.07,2.94,1.09,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","TGATCCAAGCTGGATA",3,71.44,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","G9M F70N Q176L",3
"lib2","SARS-CoV-2","TGATCCAAGTTGTCTG",2,17.56,9.05,-1.78,0.25,1.5,1.11,0.04,">1 nonsynonymous","F44P W106R S139N",3
"lib2","SARS-CoV-2","TGATCCAATAGAGATC",7,39.4,6.44,-4.39,0.49,1.5,1.13,0.02,">1 nonsynonymous","F44Y P82Q A89R F99T S139N",5
"lib2","SARS-CoV-2","TGATCCAATGTTGAAA",2,30.43,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","Y93S",1
"lib2","SARS-CoV-2","TGATCCACGATAAAAA",2,32.52,10.72,-0.11,0.05,3,1.04,0,"1 nonsynonymous","V173Y",1
"lib2","SARS-CoV-2","TGATCCATATATAACC",2,8.38,8.56,-2.28,0.29,1.99,1.18,0.02,">1 nonsynonymous","D98F N107K",2
"lib2","SARS-CoV-2","TGATCCCACCCATGCG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y35M D68* Y119G F160T G196V",5
"lib2","SARS-CoV-2","TGATCCCGAATGTATC",10,106.62,10.17,-0.67,0.02,2.86,1.08,0,"1 nonsynonymous","C6E",1
"lib2","SARS-CoV-2","TGATCCCTCCCTGCCT",7,8.24,8.86,-1.98,0.25,1.83,1.16,0.05,">1 nonsynonymous","A33I A105R",2
"lib2","SARS-CoV-2","TGATCCCTGAGTGGGC",1,6.25,9.44,-1.4,0.16,1.8,1.06,0.01,">1 nonsynonymous","T46Y V173T",2
"lib2","SARS-CoV-2","TGATCCGAGAACTCCA",2,17.22,8.69,-2.14,0.21,1.95,1.1,0.02,">1 nonsynonymous","C6L L38A",2
"lib2","SARS-CoV-2","TGATCCGAGCTAAATA",1,38.25,10.59,-0.25,0.08,2.95,1.07,0,"1 nonsynonymous","A190C",1
"lib2","SARS-CoV-2","TGATCCGATTACAAAA",14,191.24,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","Y91L S113L N151V T170S",4
"lib2","SARS-CoV-2","TGATCCGCATTTAGGT",7,0.82,NA,NA,NA,NA,NA,NA,"stop","L60*",1
"lib2","SARS-CoV-2","TGATCCGCTGAATAAA",6,85.97,9.71,-1.12,0.06,2.11,1.06,0,">1 nonsynonymous","A18K N64D D98F",3
"lib2","SARS-CoV-2","TGATCCGGAAATGACA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T L60V G117K E141G",4
"lib2","SARS-CoV-2","TGATCCGGAGGTGCTG",6,59.08,10.84,0,0.05,2.89,1.11,0,"1 nonsynonymous","T55K",1
"lib2","SARS-CoV-2","TGATCCGGTTCCCTTA",3,18.95,6.07,-4.77,1.11,1.5,1.14,0.03,">1 nonsynonymous","N1A C6I Y35V G172S",4
"lib2","SARS-CoV-2","TGATCCTACAACAAAC",19,7.94,NA,NA,NA,NA,NA,NA,"stop","D98Q G174*",2
"lib2","SARS-CoV-2","TGATCCTTACAATCTT",2,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25M S41Y",2
"lib2","SARS-CoV-2","TGATCGAACGCTAAAA",9,247.37,9.91,-0.92,0.03,2.87,1.08,0,">1 nonsynonymous","K87G S129F",2
"lib2","SARS-CoV-2","TGATCGACAGAAATAC",7,78.09,9.77,-1.07,0.05,1.96,1.1,0,">1 nonsynonymous","W106K S139R",2
"lib2","SARS-CoV-2","TGATCGAGCTGCTACA",1,54.82,10.31,-0.53,0.08,2.73,1.1,0,">1 nonsynonymous","K87R D98F S164M T201M",4
"lib2","SARS-CoV-2","TGATCGATAGATATGA",3,16.77,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","E10Y A42L F99L",3
"lib2","SARS-CoV-2","TGATCGATTGGCTGCG",1,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S T100A T201R",3
"lib2","SARS-CoV-2","TGATCGCACACAAATA",7,204.61,10.72,-0.11,0.03,2.98,1.04,0,"1 nonsynonymous","G9R",1
"lib2","SARS-CoV-2","TGATCGCACGATACTG",4,93.15,10.59,-0.25,0.05,2.94,1.05,0,">1 nonsynonymous","K56V E141R",2
"lib2","SARS-CoV-2","TGATCGCACTATACAC",2,13.62,9.09,-1.74,0.2,1.61,1.11,0.04,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","TGATCGCGAATGATTT",5,33.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19R N64F L95Y N110L A190Y",5
"lib2","SARS-CoV-2","TGATCGCTGAAATATG",1,29.38,8.31,-2.52,0.17,2.74,1.05,0.01,">1 nonsynonymous","D90R N157K",2
"lib2","SARS-CoV-2","TGATCGCTTTACGGTA",6,30.03,10.77,-0.06,0.05,2.98,1.01,0,"1 nonsynonymous","T63L",1
"lib2","SARS-CoV-2","TGATCGGACTGAATTA",1,44.07,10.87,0.03,0.03,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TGATCGGAGGAACTCA",3,18.41,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N107G R136V C158K",3
"lib2","SARS-CoV-2","TGATCGGGAATCGCCG",1,62.07,10.86,0.03,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATCGTACTGGCTAT",6,55.49,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","A18L R127Y Y165Q",3
"lib2","SARS-CoV-2","TGATCGTATAAAAAAC",2,29.14,6.42,-4.42,0.57,1.5,1.14,0.02,">1 nonsynonymous","A22T Y35W F99T",3
"lib2","SARS-CoV-2","TGATCGTTTACTACTA",9,201.83,10.79,-0.05,0.05,2.94,1.08,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","TGATCTAATACAACGG",5,49.71,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N13F S43G L122V Y143A T148A",5
"lib2","SARS-CoV-2","TGATCTACAACGAGGC",1,1.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39L V77A P96I A105E F185R G196K",6
"lib2","SARS-CoV-2","TGATCTACATTTCTCG",13,219.81,10.14,-0.69,0.05,2.72,1.02,0,">1 nonsynonymous","F44M N151I",2
"lib2","SARS-CoV-2","TGATCTAGATAATTGG",3,0.45,NA,NA,NA,NA,NA,NA,"stop","F99* P149A Y165T G174Q",4
"lib2","SARS-CoV-2","TGATCTAGCTCTACTT",8,5.82,NA,NA,NA,NA,NA,NA,"stop","Y35R P133* S139R",3
"lib2","SARS-CoV-2","TGATCTATACAAATGT",13,161.46,8.73,-2.1,0.09,1.78,1.05,0,">1 nonsynonymous","K56C D75E Y123V S139T G174T",5
"lib2","SARS-CoV-2","TGATCTATTTAAACTT",2,42.56,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V11A L38R Y119S",3
"lib2","SARS-CoV-2","TGATCTCAGTTAGGCT",2,102.62,10.49,-0.35,0.05,2.94,1.03,0,">1 nonsynonymous","K26L D98K",2
"lib2","SARS-CoV-2","TGATCTCCCTGCGCCA",4,25.44,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F44I V52S P96R T170G",4
"lib2","SARS-CoV-2","TGATCTCGTGAACTAA",2,34.64,10.55,-0.28,0.06,3,1,0,">1 nonsynonymous","G9R A14K",2
"lib2","SARS-CoV-2","TGATCTCTGGACCGAT",6,58.88,9.4,-1.44,0.18,1.5,1.06,0.02,">1 nonsynonymous","C6Y K26V F185S",3
"lib2","SARS-CoV-2","TGATCTGAAAACCTAT",9,72.07,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G101Y A145S C150Y",3
"lib2","SARS-CoV-2","TGATCTGACAAGCATT",10,113.12,10.88,0.04,0.04,2.9,1.11,0,"1 nonsynonymous","K128R",1
"lib2","SARS-CoV-2","TGATCTGAGTGTCAAA",10,21.05,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","C49T T55V Y93S A105P F156L",5
"lib2","SARS-CoV-2","TGATCTGATGAGAGTG",4,43.91,10.82,-0.01,0.08,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATCTGCCAGAAAAA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P161R",1
"lib2","SARS-CoV-2","TGATCTGCCCGCGTAA",9,54.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F99P S139L",2
"lib2","SARS-CoV-2","TGATCTGCCGTTCCGT",2,44.86,8.03,-2.8,0.22,1.78,1.12,0.02,">1 nonsynonymous","A18N Y121D T201W",3
"lib2","SARS-CoV-2","TGATCTGCGAAAAAGC",2,2.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60K F99N E154P L162R",4
"lib2","SARS-CoV-2","TGATCTGTATGAGACA",1,20.58,10.88,0.04,0.07,2.71,1.3,0,"1 nonsynonymous","S200I",1
"lib2","SARS-CoV-2","TGATCTGTCAGTACAG",6,63.9,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P7F L60A T85G P96V Y143N G174L",6
"lib2","SARS-CoV-2","TGATCTGTCTCCTGAT",7,75.09,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","N40V Y50L C102H",3
"lib2","SARS-CoV-2","TGATCTTAATGACGCG",3,52.65,10.22,-0.61,0.06,2.71,1.1,0,">1 nonsynonymous","A81Q E141L",2
"lib2","SARS-CoV-2","TGATCTTACCTATGAA",5,30.44,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N1K F12E Y91M A105K L122N R136L",6
"lib2","SARS-CoV-2","TGATCTTGTAAAGACT",5,45.29,10.32,-0.52,0.06,2.85,1.02,0,">1 nonsynonymous","N4F S41I T201R",3
"lib2","SARS-CoV-2","TGATCTTTAACAGACA",13,149.64,10.74,-0.09,0.04,2.97,1.06,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","TGATGAAAAAAACCGT",1,46.17,9.66,-1.18,0.05,2.95,1.08,0,">1 nonsynonymous","L60H N171L",2
"lib2","SARS-CoV-2","TGATGAAAAATAAGAT",9,140.3,7.24,-3.59,0.18,1.61,1.09,0.01,">1 nonsynonymous","Y159R S200Q",2
"lib2","SARS-CoV-2","TGATGAAAAGTATAGT",6,92.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P96L Q176S",2
"lib2","SARS-CoV-2","TGATGAAAGCGTTGAT",14,7.23,7.89,-2.94,0.23,3,1.17,0.01,">1 nonsynonymous","V103R D112F N130F",3
"lib2","SARS-CoV-2","TGATGAAATATGGGCG",6,63.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32Q A89H T148P",3
"lib2","SARS-CoV-2","TGATGAACACCCTCCG",4,0.34,NA,NA,NA,NA,NA,NA,"stop","L38C F44H K56* R73D G83C G155V F156T",7
"lib2","SARS-CoV-2","TGATGAACAGCGACCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1W N24S V115L R124A",4
"lib2","SARS-CoV-2","TGATGAAGACTATACG",5,25.39,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","S45K C49M D98Y N110A Y165I",5
"lib2","SARS-CoV-2","TGATGAAGCGAATATA",3,2.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S F44T N64L S139Y",4
"lib2","SARS-CoV-2","TGATGAAGCGAGGCAT",4,42.15,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K48V K94Y N109I",3
"lib2","SARS-CoV-2","TGATGAATACGTAACT",14,94.16,6,-4.84,0.67,1.5,1.1,0.01,">1 nonsynonymous","G83T C158L T201S",3
"lib2","SARS-CoV-2","TGATGAATGTACCTAA",5,85.23,10.57,-0.27,0.03,2.89,1.09,0,">1 nonsynonymous","A42C V115R T201S",3
"lib2","SARS-CoV-2","TGATGACATATTAAAG",12,50.15,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A81Y I142D P149K",3
"lib2","SARS-CoV-2","TGATGACCAATGTGAA",8,174.21,10.25,-0.59,0.03,2.99,1.02,0,">1 nonsynonymous","K56V F156L",2
"lib2","SARS-CoV-2","TGATGACCTTCAATTT",1,46.31,8.81,-2.03,0.13,2.1,1.1,0.01,">1 nonsynonymous","W106K T170M",2
"lib2","SARS-CoV-2","TGATGACGTCCTAAAA",1,8.82,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","V37W D98Q Y143N P149S G155V",5
"lib2","SARS-CoV-2","TGATGACTAATACTAA",1,75.12,8.86,-1.97,0.06,2.98,1.07,0,">1 nonsynonymous","I28W D90R N157S",3
"lib2","SARS-CoV-2","TGATGACTACCAGAAA",2,23.2,9.16,-1.68,0.08,2.97,1.13,0,"1 nonsynonymous","Y119L",1
"lib2","SARS-CoV-2","TGATGAGAAAAAAGTA",1,7.92,6,-4.84,2,3,1.2,0.04,">1 nonsynonymous","V20G D68N G116L E154G",4
"lib2","SARS-CoV-2","TGATGAGAGGCCTTAT",9,46.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85I Y93V",2
"lib2","SARS-CoV-2","TGATGATAAAGCGACC",5,78.26,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T63Y G172M",2
"lib2","SARS-CoV-2","TGATGATAATGGTATA",13,6.82,NA,NA,NA,NA,NA,NA,"stop","S19* F44Q R73K T85A P149S",5
"lib2","SARS-CoV-2","TGATGATAGAAAGTAA",5,19.31,9.18,-1.66,0.15,1.56,1.03,0.01,">1 nonsynonymous","T3P E76G N109R",3
"lib2","SARS-CoV-2","TGATGATATTAAATTC",13,151.76,10.76,-0.07,0.04,2.98,1.02,0,">1 nonsynonymous","C61M T100V",2
"lib2","SARS-CoV-2","TGATGATTACAAATAA",5,70.85,10.33,-0.5,0.05,2.86,1.11,0,">1 nonsynonymous","Y39D F160T",2
"lib2","SARS-CoV-2","TGATGATTCACAACCT",5,111.51,9.86,-0.98,0.06,2.38,1.09,0,">1 nonsynonymous","T100S N107A",2
"lib2","SARS-CoV-2","TGATGCAATCTAGTTC",4,14.76,10.91,0.07,0.06,3,1,0,">1 nonsynonymous","I138L K199Q",2
"lib2","SARS-CoV-2","TGATGCACTAGTTACC",10,383.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L60S K94H A145S Y175D",4
"lib2","SARS-CoV-2","TGATGCACTTTAGATG",5,9.1,9.14,-1.7,0.1,2.54,1.12,0.01,">1 nonsynonymous","V65A V77M",2
"lib2","SARS-CoV-2","TGATGCATGGTACCAC",23,400.46,10.85,0.02,0.03,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGATGCATTAAATAGT",1,1.63,NA,NA,NA,NA,NA,NA,"stop","N1G N4S L60E W106M R124* D137Y P169E",7
"lib2","SARS-CoV-2","TGATGCCAGTTCCATC",4,55.47,8.66,-2.18,0.09,2.99,1,0,">1 nonsynonymous","F8I R27L A145M F156N",4
"lib2","SARS-CoV-2","TGATGCCATCATTAGG",17,61.83,6,-4.84,2,3,1.16,0,">1 nonsynonymous","F12D G86E T201A",3
"lib2","SARS-CoV-2","TGATGCCGAATACCAA",9,243.96,10.16,-0.68,0.02,2.97,1.03,0,"1 nonsynonymous","A145C",1
"lib2","SARS-CoV-2","TGATGCCGAGGGACAT",7,20.45,6,-4.84,2,3,1.09,0,">1 nonsynonymous","G86Q R136S Q144V F185R",4
"lib2","SARS-CoV-2","TGATGCCGCAAACCCA",9,172.1,10.87,0.04,0.06,2.91,1.12,0,"1 nonsynonymous","Y39L",1
"lib2","SARS-CoV-2","TGATGCCGGGAATACC",2,23.84,10.81,-0.03,0.05,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATGCCTCTTCCACT",7,36.98,6.67,-4.17,0.45,1.5,1.15,0.03,">1 nonsynonymous","I2S Y35R S41K T85K A145V Y178V S184K",7
"lib2","SARS-CoV-2","TGATGCGACTGCAAGG",4,27.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V20E F134I",2
"lib2","SARS-CoV-2","TGATGCGCAACTTGTT",1,4.12,NA,NA,NA,NA,NA,NA,"stop","L5* A81T G86L S108I V115Q F134V E141L",7
"lib2","SARS-CoV-2","TGATGCGCACTTTTAA",5,18,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C61D C158Y",2
"lib2","SARS-CoV-2","TGATGCGCGTTACGGA",2,43.71,6.73,-4.1,0.33,1.5,1.16,0.01,"1 nonsynonymous","C158L",1
"lib2","SARS-CoV-2","TGATGCTACGGTACGG",5,106.47,10.78,-0.05,0.06,2.91,1.1,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TGATGCTTAAAGAGAA",6,19.63,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","E135F Q144V S184D",3
"lib2","SARS-CoV-2","TGATGGACTTGCATCC",21,608.79,10.77,-0.07,0.04,2.97,1.04,0,"1 nonsynonymous","D90K",1
"lib2","SARS-CoV-2","TGATGGATGAAAAAAT",4,138.8,9.92,-0.91,0.05,2.86,1.08,0,">1 nonsynonymous","D90M G166S",2
"lib2","SARS-CoV-2","TGATGGATTATAAATC",3,18.87,6.31,-4.53,0.37,1.71,1.14,0.01,">1 nonsynonymous","N58K L125D T170V",3
"lib2","SARS-CoV-2","TGATGGCAAAAGTGCG",7,4.71,NA,NA,NA,NA,NA,NA,"stop","R27* R136V T201*",3
"lib2","SARS-CoV-2","TGATGGCAGTACGAAA",5,49.19,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F44H D68E A81C",3
"lib2","SARS-CoV-2","TGATGGCGAAATCAAG",2,10.84,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","N13S C61H G86C",3
"lib2","SARS-CoV-2","TGATGGCGGTAACACA",6,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5F F44R I138C N151S N157K",5
"lib2","SARS-CoV-2","TGATGGCGTACTAAGA",4,79.83,10.01,-0.83,0.07,2.49,1,0,">1 nonsynonymous","Y66L D98G K128L",3
"lib2","SARS-CoV-2","TGATGGCTTTTATAGT",2,0.56,NA,NA,NA,NA,NA,NA,"stop","N64V R73V K94* A105G T140N",5
"lib2","SARS-CoV-2","TGATGGGCTTTATACT",9,59.41,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","C49L T63Y G74V Y121S Y175G",5
"lib2","SARS-CoV-2","TGATGGTAGCACTAAT",10,3.55,NA,NA,NA,NA,NA,NA,"stop","N13Y V37R P149T F160L P169* S184M T201M",7
"lib2","SARS-CoV-2","TGATGGTAGGTATGCG",3,90.83,8.87,-1.97,0.07,2.93,1.09,0,"1 nonsynonymous","F126K",1
"lib2","SARS-CoV-2","TGATGGTGAACAATTC",5,56.72,7.34,-3.49,0.21,1.69,1.19,0.01,">1 nonsynonymous","T3V K56Q D112S",3
"lib2","SARS-CoV-2","TGATGGTTCATTTGAT",2,21.24,9,-1.84,0.33,1.63,1.18,0.04,">1 nonsynonymous","F8T I28G",2
"lib2","SARS-CoV-2","TGATGGTTCCATATGA",2,6.29,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N1S P7V A89V L122R A145L C195F",6
"lib2","SARS-CoV-2","TGATGTAAAAACAAAA",6,36,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y93R A105S T201C",3
"lib2","SARS-CoV-2","TGATGTAAAGAACTGA",3,24.18,10.4,-0.44,0.07,2.96,1,0,"1 nonsynonymous","C6F",1
"lib2","SARS-CoV-2","TGATGTAACTTCCGGC",10,137.86,10.8,-0.04,0.06,2.93,1.08,0,"1 nonsynonymous","A67L",1
"lib2","SARS-CoV-2","TGATGTACGAAAAAAG",5,54.92,10.35,-0.49,0.04,2.98,1.05,0,"1 nonsynonymous","F156L",1
"lib2","SARS-CoV-2","TGATGTACTAGCCGGG",14,232.82,10.26,-0.57,0.04,2.79,1.02,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","TGATGTATACAAAGCG",5,0,NA,NA,NA,NA,NA,NA,"stop","F70N Y93* Y123L T201*",4
"lib2","SARS-CoV-2","TGATGTCAAGTGAATT",1,0,NA,NA,NA,NA,NA,NA,"stop","C61L N107S N171S K199*",4
"lib2","SARS-CoV-2","TGATGTCAGGCGAATA",1,12.21,6.46,-4.37,0.47,1.5,1.1,0.03,">1 nonsynonymous","L5K T55D T63I V182Y",4
"lib2","SARS-CoV-2","TGATGTGGCCGTGGGG",1,16.77,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","T15C L60V Y175V",3
"lib2","SARS-CoV-2","TGATGTGTACCGATAT",12,75.33,9.33,-1.5,0.09,1.76,1.08,0,"1 nonsynonymous","V103M",1
"lib2","SARS-CoV-2","TGATGTGTAGAGGTTG",1,22.85,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R16V S113F P161T",3
"lib2","SARS-CoV-2","TGATGTGTCAACAAAT",2,15.13,6.05,-4.78,0.71,1.5,1.1,0.02,">1 nonsynonymous","V20L N40M",2
"lib2","SARS-CoV-2","TGATGTTAATTGCTAG",2,21.65,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36W S41C A89L Y121L V153M",5
"lib2","SARS-CoV-2","TGATGTTACAGCGTGA",2,23.41,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1L G51I A81K N118K S129L",5
"lib2","SARS-CoV-2","TGATGTTACTGACGCT",2,31.2,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N13R R25C F62G",3
"lib2","SARS-CoV-2","TGATGTTCGAGGTCAT",1,20.71,10.83,-0.01,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATGTTTTTTAACAT",4,0,NA,NA,NA,NA,NA,NA,"stop","W23* T85V K114T",3
"lib2","SARS-CoV-2","TGATTAAAAGACCATA",1,55.36,10.09,-0.75,0.11,2.46,1.01,0.01,">1 nonsynonymous","V32A N110D I138K G152S",4
"lib2","SARS-CoV-2","TGATTAAATACGTACG",11,40.68,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","G101M L122R",2
"lib2","SARS-CoV-2","TGATTAAATAGTTAGA",9,64.64,7.04,-3.8,0.31,1.5,1.09,0.02,">1 nonsynonymous","F62C G86Q D97L",3
"lib2","SARS-CoV-2","TGATTAAATGAGTAAA",6,51.88,6.07,-4.76,0.99,1.5,1.16,0.02,">1 nonsynonymous","Y35N K94I",2
"lib2","SARS-CoV-2","TGATTAACCAAGCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","T46* Y119D I142E",3
"lib2","SARS-CoV-2","TGATTAACCGGTGGAT",19,11.95,NA,NA,NA,NA,NA,NA,"stop","D34H K56E D68A A89* N130G",5
"lib2","SARS-CoV-2","TGATTAACCTAAAAGC",4,0.77,NA,NA,NA,NA,NA,NA,"stop","A42S T55P G83I G116W S129L Y165*",6
"lib2","SARS-CoV-2","TGATTAACGAAGGGTA",11,157.82,10.19,-0.64,0.05,2.74,1.06,0,">1 nonsynonymous","G51E N130T",2
"lib2","SARS-CoV-2","TGATTAAGCTCTACGC",2,49.87,10.44,-0.4,0.06,2.92,1.08,0,">1 nonsynonymous","I2T V115M S147F",3
"lib2","SARS-CoV-2","TGATTAAGGTGACGGA",5,0.02,NA,NA,NA,NA,NA,NA,"stop","C6F A14T Y50T Y119*",4
"lib2","SARS-CoV-2","TGATTAATACCAATAT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","L60* D98L R127W I138L",4
"lib2","SARS-CoV-2","TGATTAATATACTGAG",4,54.6,10.3,-0.53,0.06,2.57,1,0,">1 nonsynonymous","T15G T100N S200R",3
"lib2","SARS-CoV-2","TGATTAATCAGAACAT",7,53.16,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2T D68G G155S",3
"lib2","SARS-CoV-2","TGATTAATTGACATGA",4,48,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S36Y F167C",2
"lib2","SARS-CoV-2","TGATTACAAACCTACA",3,49.89,9.99,-0.85,0.1,2.53,1.02,0,"1 nonsynonymous","P133R",1
"lib2","SARS-CoV-2","TGATTACAAACTTAGA",8,199.14,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","G9C F126P I138L S164I",4
"lib2","SARS-CoV-2","TGATTACAATCCCATG",3,104.05,8.25,-2.59,0.17,2.19,1.05,0.01,">1 nonsynonymous","E10D K114L E154F G174Y",4
"lib2","SARS-CoV-2","TGATTACACATAACCT",2,74.6,9.1,-1.74,0.08,2.5,1.07,0,">1 nonsynonymous","G83D S129I N151H T170Q",4
"lib2","SARS-CoV-2","TGATTACAGAGGTAAA",2,44.2,10.87,0.03,0.05,2.99,1.04,0,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","TGATTACGAGCAGGTA",8,72.44,8.55,-2.28,0.11,1.71,1.1,0.01,">1 nonsynonymous","F44Y D98R W106R F156S S200V",5
"lib2","SARS-CoV-2","TGATTACGAGTTCAGA",16,65.92,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C49D G196C",2
"lib2","SARS-CoV-2","TGATTACGGTTACCAA",2,50.84,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4K R27E D34R S41E G51L T201M",6
"lib2","SARS-CoV-2","TGATTACGTATACACA",8,54.88,9.37,-1.46,0.08,2.21,1.05,0,">1 nonsynonymous","S19Q A42T D98T",3
"lib2","SARS-CoV-2","TGATTAGATAATTCCA",3,11.59,6,-4.84,2,2.3,1.25,0.01,">1 nonsynonymous","K94P C150R",2
"lib2","SARS-CoV-2","TGATTAGATACCATAC",1,2.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35M",1
"lib2","SARS-CoV-2","TGATTAGCACGTTGAG",5,56.28,9.79,-1.04,0.08,1.97,1.01,0,">1 nonsynonymous","L122V L131F",2
"lib2","SARS-CoV-2","TGATTAGCAGAACAGC",11,119.21,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","K87T N92C S139A P161M",4
"lib2","SARS-CoV-2","TGATTAGCCAAGCAGG",4,5.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13L G51W D90S K114T S129R",5
"lib2","SARS-CoV-2","TGATTAGCCTGAGTCA",7,75.07,10.84,0,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATTAGCTACCTTCT",1,28.64,6,-4.84,2,1.5,1.09,0,">1 nonsynonymous","V20M N64L G83M C158S",4
"lib2","SARS-CoV-2","TGATTAGGAAATTATA",4,31.49,6,-4.84,1.09,3,1.08,0,">1 nonsynonymous","G9I K48L D90K F126N Q176L R179S T201V",7
"lib2","SARS-CoV-2","TGATTAGGAAATTGTG",2,21.84,9.64,-1.2,0.11,2.61,1.06,0.01,">1 nonsynonymous","K48Y C61N G116Y",3
"lib2","SARS-CoV-2","TGATTAGGAACGTTAA",2,84.52,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86M D97A G155I",3
"lib2","SARS-CoV-2","TGATTAGGATAAACAA",3,227.14,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F12S G174H V181D",3
"lib2","SARS-CoV-2","TGATTAGTGGACTGAC",1,27.87,10.81,-0.03,0.02,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATTATACAATTTTC",5,69.29,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C6S N157C",2
"lib2","SARS-CoV-2","TGATTATACGCTAATT",3,62.36,10.87,0.03,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATTATACTCTATCC",1,1.17,NA,NA,NA,NA,NA,NA,"stop","F47Y K56* I104N K128R T148* E154M",6
"lib2","SARS-CoV-2","TGATTATACTTTAAGT",1,4.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D137S Y165D",2
"lib2","SARS-CoV-2","TGATTATCATATCCTG",3,37.11,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N64T G83W F99N F167S",4
"lib2","SARS-CoV-2","TGATTATCGCTTTGGC",16,74.63,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L5I T55L C61P G83F I88K N107K",6
"lib2","SARS-CoV-2","TGATTATCTGAACGTT",4,82.58,10.27,-0.56,0.04,2.94,1.05,0,"1 nonsynonymous","C6D",1
"lib2","SARS-CoV-2","TGATTATTAACTTGCG",7,109,9.79,-1.05,0.07,2.16,1.05,0,">1 nonsynonymous","L38N V194A",2
"lib2","SARS-CoV-2","TGATTATTTTACGACA",7,0,NA,NA,NA,NA,NA,NA,"stop","N4A K94N L131* T201H",4
"lib2","SARS-CoV-2","TGATTCAAAAAAGTGC",1,59.92,10.84,0.01,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATTCAAAGATGATT",3,19.16,10.61,-0.23,0.11,2.77,1.16,0,"1 nonsynonymous","N13Q",1
"lib2","SARS-CoV-2","TGATTCAAGACGCCAA",3,14.65,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","S53Y I104C P133L",3
"lib2","SARS-CoV-2","TGATTCAATACCACAT",5,112.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S41P E141N P177L",3
"lib2","SARS-CoV-2","TGATTCACATACTATA",5,14.23,9.51,-1.32,0.26,2.35,1.11,0.03,">1 nonsynonymous","C6L S53Y T85V E154D P197R",5
"lib2","SARS-CoV-2","TGATTCACCTACTATT",3,19.23,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","D68L K87V",2
"lib2","SARS-CoV-2","TGATTCACGGCATAAG",14,92.85,9.23,-1.6,0.16,1.64,1.15,0.01,"1 nonsynonymous","P96W",1
"lib2","SARS-CoV-2","TGATTCACTAATTGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4L F17* A42P V65G D98L N130S",6
"lib2","SARS-CoV-2","TGATTCACTAGGATTA",4,67.3,9.09,-1.75,0.06,2.92,1.09,0,">1 nonsynonymous","Y119F N151P",2
"lib2","SARS-CoV-2","TGATTCATAAAACATC",6,0.78,NA,NA,NA,NA,NA,NA,"stop","I28* K56W",2
"lib2","SARS-CoV-2","TGATTCATAAGGTATG",5,125.45,10.62,-0.22,0.04,2.97,1.03,0,"1 nonsynonymous","G116L",1
"lib2","SARS-CoV-2","TGATTCATCAATCATT",2,31.03,8.44,-2.39,0.2,1.54,1.16,0.03,">1 nonsynonymous","N1M A14N D90F K132D F156V",5
"lib2","SARS-CoV-2","TGATTCCAAAACCCAA",1,11.14,8.08,-2.76,0.34,1.5,1.03,0.04,">1 nonsynonymous","S113P N151R",2
"lib2","SARS-CoV-2","TGATTCCATCCCATGG",6,72.25,10.85,0.01,0.06,2.88,1.13,0,"1 nonsynonymous","S36E",1
"lib2","SARS-CoV-2","TGATTCCATCGATATG",5,67.04,10.9,0.06,0.05,2.98,1.04,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TGATTCCCAATGACTA",10,152.32,9.89,-0.94,0.05,2.92,1.05,0,"1 nonsynonymous","Y119K",1
"lib2","SARS-CoV-2","TGATTCCTCCAAGATG",6,9.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13V N107T",2
"lib2","SARS-CoV-2","TGATTCGAACAGAAAC",6,105.97,6.29,-4.54,0.34,1.5,1.1,0.01,">1 nonsynonymous","T55R F156I Y175K",3
"lib2","SARS-CoV-2","TGATTCGCCAAGTCGG",6,23.56,10.46,-0.37,0.05,2.84,1.19,0,">1 nonsynonymous","T63S E154M",2
"lib2","SARS-CoV-2","TGATTCGGTGCAGTAT",4,93.07,10.77,-0.07,0.07,2.9,1.13,0,"1 nonsynonymous","T55L",1
"lib2","SARS-CoV-2","TGATTCGTAGTCATTA",6,107.02,10.67,-0.16,0.05,2.9,1.03,0,">1 nonsynonymous","R78L T100Y",2
"lib2","SARS-CoV-2","TGATTCGTGCGCCCAG",7,62.81,8.26,-2.57,0.17,1.55,1.11,0.01,">1 nonsynonymous","K56A G86C A192D",3
"lib2","SARS-CoV-2","TGATTCTAATACATTA",3,1.11,NA,NA,NA,NA,NA,NA,"stop","K48* N130G",2
"lib2","SARS-CoV-2","TGATTCTAATGCACGT",3,13.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y91K V180F",2
"lib2","SARS-CoV-2","TGATTCTAGGAAGATA",2,30.99,9.43,-1.41,0.07,2.86,1.09,0,">1 nonsynonymous","L5Y T63Y T170F",3
"lib2","SARS-CoV-2","TGATTCTCATAAAAAT",6,56.3,8.82,-2.02,0.25,1.6,1.24,0.02,"1 nonsynonymous","D137W",1
"lib2","SARS-CoV-2","TGATTGAAAAATTTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","G9R C61T R136*",3
"lib2","SARS-CoV-2","TGATTGAAGAGATTTT",3,152.26,9.77,-1.07,0.14,1.71,1.13,0.01,"1 nonsynonymous","V173T",1
"lib2","SARS-CoV-2","TGATTGAAGCACGGCT",2,26.88,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6R S19Q R27A Y35H D59T",5
"lib2","SARS-CoV-2","TGATTGACAGACCAAA",16,135.99,6,-4.84,2,3,1.19,0,">1 nonsynonymous","N92V Y165S",2
"lib2","SARS-CoV-2","TGATTGACCTAAAATA",2,15.89,9.24,-1.6,0.16,2.7,1.13,0.01,">1 nonsynonymous","I104L T170P",2
"lib2","SARS-CoV-2","TGATTGACGTCATTAT",1,24.89,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","G101D N107L",2
"lib2","SARS-CoV-2","TGATTGAGCTACTATC",5,38.81,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","P82N D112H",2
"lib2","SARS-CoV-2","TGATTGATGATTTCAC",5,0.17,NA,NA,NA,NA,NA,NA,"stop","S41* S45T G83I",3
"lib2","SARS-CoV-2","TGATTGATTTGATAAT",5,39.58,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A89M S108N T201R",3
"lib2","SARS-CoV-2","TGATTGCCCGGAGTAA",14,72.51,6,-4.84,2,3,1.2,0,">1 nonsynonymous","N92T G146P",2
"lib2","SARS-CoV-2","TGATTGCCGTCCCTTG",3,68.37,10.83,-0.01,0.04,2.95,1.06,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","TGATTGCCTAAGTCTG",3,37.57,6.02,-4.81,0.62,1.77,1.17,0.01,">1 nonsynonymous","F70T D98P",2
"lib2","SARS-CoV-2","TGATTGCCTTTTCTGA",3,29.18,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","C6V T15A F44L C49V L60S D90Y",6
"lib2","SARS-CoV-2","TGATTGCGCGATTGAA",3,69.36,6.69,-4.15,0.52,1.5,1.23,0.03,">1 nonsynonymous","N30M G86S D90T",3
"lib2","SARS-CoV-2","TGATTGGCATAAAGTA",7,127.06,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V65Q Y159I N171K C195L",4
"lib2","SARS-CoV-2","TGATTGGGAACTTACC",3,21.28,10.89,0.05,0.07,2.86,1.16,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","TGATTGGGAGACTAAA",3,71.03,9.35,-1.49,0.04,2.98,1.02,0,"1 nonsynonymous","Y119I",1
"lib2","SARS-CoV-2","TGATTGTAAAATATTA",1,21.91,10.05,-0.79,0.08,2.58,1.19,0,">1 nonsynonymous","T100S F134S",2
"lib2","SARS-CoV-2","TGATTGTCTAGAAGCT",12,35.87,8.49,-2.35,0.12,2.09,1.12,0,">1 nonsynonymous","R27M Q84V Y119R L162F",4
"lib2","SARS-CoV-2","TGATTGTGTGATCTCT",1,7.27,6.22,-4.62,1.28,1.5,1.1,0.08,">1 nonsynonymous","C6I F99P D112E",3
"lib2","SARS-CoV-2","TGATTGTTAGTTAAGG",5,123.73,10.25,-0.59,0.08,2.72,1.07,0,">1 nonsynonymous","Y121Q N151V",2
"lib2","SARS-CoV-2","TGATTGTTCAGGTGCA",2,53.82,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6T K48D P82M D112T",4
"lib2","SARS-CoV-2","TGATTTAAACTTAAGA",2,0.82,NA,NA,NA,NA,NA,NA,"stop","F17V K48Y V77G I138* A190S",5
"lib2","SARS-CoV-2","TGATTTAATGATATGA",8,262.98,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G9D F44E V71L A105S N120I Y175N",6
"lib2","SARS-CoV-2","TGATTTACTACCTTAG",5,27.75,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T15I S45L S139D A145V N151T",5
"lib2","SARS-CoV-2","TGATTTAGCACCCAAC",2,15.48,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N107A R124S Y143S",3
"lib2","SARS-CoV-2","TGATTTAGTATTAAGT",10,225.68,10.87,0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGATTTATCCCACAAT",1,38.07,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","V77Y P169T G196W",3
"lib2","SARS-CoV-2","TGATTTCAAATAACTA",2,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39T G152P L187D",3
"lib2","SARS-CoV-2","TGATTTCAGTACAAGG",6,18.12,7.38,-3.45,0.55,1.5,1.15,0.04,">1 nonsynonymous","F44G S129V G146F A190F",4
"lib2","SARS-CoV-2","TGATTTCCAGTGGATA",6,180.5,8.85,-1.99,0.05,2.97,1.07,0,"1 nonsynonymous","Y159M",1
"lib2","SARS-CoV-2","TGATTTCTAGTGACAC",7,45.43,9.91,-0.92,0.09,2.51,1.04,0,">1 nonsynonymous","S41I A105V",2
"lib2","SARS-CoV-2","TGATTTCTCGTCCCCT",9,35.78,6,-4.84,2,1.5,1.28,0.07,">1 nonsynonymous","N13Q Y119L P177Y",3
"lib2","SARS-CoV-2","TGATTTCTGTCCCGAA",1,2.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45A T85L G116P",3
"lib2","SARS-CoV-2","TGATTTGCAAAGCTAA",7,88.28,10.7,-0.14,0.03,2.93,1.06,0,">1 nonsynonymous","K114A E186N",2
"lib2","SARS-CoV-2","TGATTTGCACCCAACT",1,37.05,6.01,-4.82,1.6,1.5,1.18,0.05,">1 nonsynonymous","V77L G101L G152H",3
"lib2","SARS-CoV-2","TGATTTGGAACAAATA",3,15.32,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","C6A C49P F62Q",3
"lib2","SARS-CoV-2","TGATTTGGACTTAAAT",2,8.6,6,-4.84,2,1.5,1.16,0.06,">1 nonsynonymous","F99H R179P",2
"lib2","SARS-CoV-2","TGATTTTCAATACCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40T V65R P169I",3
"lib2","SARS-CoV-2","TGATTTTCACGTTCTG",9,1.49,NA,NA,NA,NA,NA,NA,"stop","I80* D90Q",2
"lib2","SARS-CoV-2","TGATTTTCAGATCACA",14,126.43,9.26,-1.57,0.07,2.54,1.03,0,">1 nonsynonymous","G116T Y121C",2
"lib2","SARS-CoV-2","TGATTTTCCATATACG",2,8.12,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","S36P T100M C158F",3
"lib2","SARS-CoV-2","TGATTTTCGTTCAAAC",6,72.2,8.31,-2.52,0.17,2.51,1.06,0.01,">1 nonsynonymous","S113F N120D P149V",3
"lib2","SARS-CoV-2","TGCAAAAAAAACTAGC",3,162.2,10.49,-0.35,0.04,2.87,1.06,0,"1 nonsynonymous","K94N",1
"lib2","SARS-CoV-2","TGCAAAAAACGACAGT",2,14.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17S P82W N110L",3
"lib2","SARS-CoV-2","TGCAAAAAACGGATAT",11,47.06,8.04,-2.8,0.35,1.5,1.02,0.06,">1 nonsynonymous","N13V L95V G116E L122A S129I S164Y",6
"lib2","SARS-CoV-2","TGCAAAAAATTCTATT",4,7.73,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N92P D97L R136L",3
"lib2","SARS-CoV-2","TGCAAAAACCTTAGTT",4,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23R F47I N157L L162S K198I",5
"lib2","SARS-CoV-2","TGCAAAAACGATGCAC",1,4.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9C S41H N109K C150M",4
"lib2","SARS-CoV-2","TGCAAAACAGATGCAC",5,0.12,NA,NA,NA,NA,NA,NA,"stop","T55* F62N A105L",3
"lib2","SARS-CoV-2","TGCAAAACCCAATGCA",2,2.52,NA,NA,NA,NA,NA,NA,"stop","C49R D90* S147L",3
"lib2","SARS-CoV-2","TGCAAAACGGATCACC",2,51.71,9.93,-0.91,0.07,2.93,1.06,0,">1 nonsynonymous","F160V G174R",2
"lib2","SARS-CoV-2","TGCAAAACTACAAACA",8,175.98,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T63I F167T",2
"lib2","SARS-CoV-2","TGCAAAAGAACGTAGA",8,139.45,9.85,-0.99,0.08,2.18,1.03,0,">1 nonsynonymous","T148A L162T",2
"lib2","SARS-CoV-2","TGCAAAAGAAGTGGGG",4,21.27,6,-4.84,1.72,1.5,1.16,0.01,">1 nonsynonymous","Y39A A89R N107M",3
"lib2","SARS-CoV-2","TGCAAAAGGATTCCTA",3,3.99,NA,NA,NA,NA,NA,NA,"stop","V77* A81V",2
"lib2","SARS-CoV-2","TGCAAAAGTGTATCAA",5,1.48,NA,NA,NA,NA,NA,NA,"stop","G83I Y119* E141W",3
"lib2","SARS-CoV-2","TGCAAAAGTTTGCTAT",3,58.14,9.38,-1.46,0.06,2.89,1.11,0,"1 nonsynonymous","Y119P",1
"lib2","SARS-CoV-2","TGCAAAATAATCGAAA",8,27.58,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D97N C102Q F160T",3
"lib2","SARS-CoV-2","TGCAAAATCATCCCAT",5,6.54,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","A105R C150S",2
"lib2","SARS-CoV-2","TGCAAAATTTATCGGA",8,55.25,9.32,-1.52,0.09,1.74,1.07,0,">1 nonsynonymous","G9F F99I",2
"lib2","SARS-CoV-2","TGCAAACAAGAAGATG",5,46.2,10.81,-0.03,0.04,3,1.02,0,"1 nonsynonymous","N151F",1
"lib2","SARS-CoV-2","TGCAAACACTAACAGA",2,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41K G152V S200Y",3
"lib2","SARS-CoV-2","TGCAAACAGAACATAG",6,26.93,10.66,-0.18,0.12,3,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGCAAACAGAGACAAA",3,90.09,10.87,0.03,0.04,2.92,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAAACATAACCGTG",4,0.67,NA,NA,NA,NA,NA,NA,"stop","C49D C61* F99L",3
"lib2","SARS-CoV-2","TGCAAACATACTGCTA",15,55.09,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","R27G I72T T85M P96I K128S F160P Q168L",7
"lib2","SARS-CoV-2","TGCAAACCACTTCCAG",4,61.03,10.26,-0.57,0.09,2.55,1.09,0,">1 nonsynonymous","G9S R16L Y66C Q163Y",4
"lib2","SARS-CoV-2","TGCAAACCAGGAATCG",1,68.6,10.28,-0.56,0.05,2.92,1.1,0,">1 nonsynonymous","G174T T201N",2
"lib2","SARS-CoV-2","TGCAAACCCATTGATC",3,13.97,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","Y35N C49M D90H N130P A145P",5
"lib2","SARS-CoV-2","TGCAAACCCGGCGATT",5,47.33,10.1,-0.74,0.11,2.7,1.02,0.01,">1 nonsynonymous","W106Y E141G",2
"lib2","SARS-CoV-2","TGCAAACCTAAGAGAA",5,45.63,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F8A G101F T140Y",3
"lib2","SARS-CoV-2","TGCAAACGAGAATGTG",1,29.42,10.08,-0.75,0.11,2.85,1.04,0.01,">1 nonsynonymous","I138S F156M",2
"lib2","SARS-CoV-2","TGCAAACGCTTAAGCA",4,114.39,9.78,-1.05,0.07,2.55,1.01,0,">1 nonsynonymous","G51D Y143H",2
"lib2","SARS-CoV-2","TGCAAACGTCGGCCCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y66I D98F V103Y",3
"lib2","SARS-CoV-2","TGCAAACTACGGTACT",6,0.24,NA,NA,NA,NA,NA,NA,"stop","G9I Q84C A89L Y123*",4
"lib2","SARS-CoV-2","TGCAAAGAAAAGCTAG",5,11.49,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49Y E141F G172V",3
"lib2","SARS-CoV-2","TGCAAAGAAACCTCTG",9,3.17,NA,NA,NA,NA,NA,NA,"stop","A89* N120S F156S",3
"lib2","SARS-CoV-2","TGCAAAGACAAAAAGC",14,125.36,9.71,-1.12,0.1,2.28,1.07,0,">1 nonsynonymous","R78F E135R",2
"lib2","SARS-CoV-2","TGCAAAGACCGCTAAT",3,23.46,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G74L G146R",2
"lib2","SARS-CoV-2","TGCAAAGACCTTAACA",5,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Y G116I",2
"lib2","SARS-CoV-2","TGCAAAGATACGAGTA",5,67.32,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V37G K48D Y159S",3
"lib2","SARS-CoV-2","TGCAAAGCTTGAGACA",1,19.34,7.84,-3,0.26,1.77,1.19,0.02,">1 nonsynonymous","V77S K87L G174Q",3
"lib2","SARS-CoV-2","TGCAAAGGCTGAACGG",9,24.48,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","N13S V20S Q144I N171V",4
"lib2","SARS-CoV-2","TGCAAAGTATGTAAAT",1,0.38,NA,NA,NA,NA,NA,NA,"stop","S41* W106K N120V",3
"lib2","SARS-CoV-2","TGCAAATACAAACTAC",5,43.54,10.78,-0.06,0.07,2.96,1.04,0,">1 nonsynonymous","T85H I104Y L122F",3
"lib2","SARS-CoV-2","TGCAAATACGTTACAA",5,88.72,10.63,-0.21,0.04,2.92,1.09,0,">1 nonsynonymous","T46S N64S N151W",3
"lib2","SARS-CoV-2","TGCAAATACGTTTATA",1,46.18,8.93,-1.9,0.08,2.13,1.06,0,">1 nonsynonymous","C61H V77L D90C S129P",4
"lib2","SARS-CoV-2","TGCAAATAGGATAAAG",4,58,6.14,-4.7,0.56,1.93,1.17,0.01,">1 nonsynonymous","W23G T148P",2
"lib2","SARS-CoV-2","TGCAAATCGAAAAACC",1,15.42,8.4,-2.44,0.19,2.92,1.09,0.01,"1 nonsynonymous","L125D",1
"lib2","SARS-CoV-2","TGCAAATGATCTATCA",1,41.67,10.4,-0.44,0.04,2.92,1.12,0,">1 nonsynonymous","K56Q D98S S129P",3
"lib2","SARS-CoV-2","TGCAAATTCCTAAACC",2,35.22,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","C6N P82S",2
"lib2","SARS-CoV-2","TGCAAATTGAGTTCCA",4,2.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T S41Y P82L Q144R",4
"lib2","SARS-CoV-2","TGCAAATTTCAGCACG",1,26.21,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","T55K D98L A105G N120M T140K Y175L",6
"lib2","SARS-CoV-2","TGCAAATTTGTTGTAC",2,1.36,NA,NA,NA,NA,NA,NA,"stop","Y123* E186Y",2
"lib2","SARS-CoV-2","TGCAACAACCTTGAAT",7,40.42,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","S19L T55V G101N L162R F167H T201V",6
"lib2","SARS-CoV-2","TGCAACACGTACCATG",1,13.34,10.39,-0.45,0.07,2.96,1,0,">1 nonsynonymous","Y66N K128V K132A",3
"lib2","SARS-CoV-2","TGCAACATCAAATCAA",23,226.97,10.76,-0.08,0.04,2.88,1.04,0,">1 nonsynonymous","A42G K48E",2
"lib2","SARS-CoV-2","TGCAACCACCATCGCC",6,139.98,9.3,-1.54,0.06,2.73,1.08,0,">1 nonsynonymous","L57F G116R F156V",3
"lib2","SARS-CoV-2","TGCAACCACTTAACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T V65E G83N F99C F134P",5
"lib2","SARS-CoV-2","TGCAACCATTGTTACA",5,69.94,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","S19M I72A E154L L162H",4
"lib2","SARS-CoV-2","TGCAACCCGGATACAT",5,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R D34R",2
"lib2","SARS-CoV-2","TGCAACCGAAAAGAAA",3,1.91,NA,NA,NA,NA,NA,NA,"stop","G9D F156* T201F",3
"lib2","SARS-CoV-2","TGCAACCGCGACTTTG",6,14.5,6.71,-4.13,0.47,1.5,1.07,0.05,">1 nonsynonymous","C49L T55S D90K R124K E141I",5
"lib2","SARS-CoV-2","TGCAACCTTCAAGACA",6,111.77,10.71,-0.13,0.04,2.91,1.07,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TGCAACGAACTGACAT",13,88.76,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V11L A89I G117I K128F",4
"lib2","SARS-CoV-2","TGCAACGAATCCCACG",5,1.32,NA,NA,NA,NA,NA,NA,"stop","K56S N107S Y119* G152D",4
"lib2","SARS-CoV-2","TGCAACGAGAAATTGC",1,0.19,NA,NA,NA,NA,NA,NA,"stop","N64P S69K G101A N151*",4
"lib2","SARS-CoV-2","TGCAACGAGCCGACGA",3,6.47,6.84,-3.99,0.37,1.5,1.03,0.01,">1 nonsynonymous","A14N N64F V71I D112F",4
"lib2","SARS-CoV-2","TGCAACGAGTCTTCAC",8,127.7,9.98,-0.86,0.09,2.24,1.03,0,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","TGCAACGATTTATCAA",14,1.79,NA,NA,NA,NA,NA,NA,"stop","S36* F47V W106S",3
"lib2","SARS-CoV-2","TGCAACGCCGTATAAT",7,3.62,NA,NA,NA,NA,NA,NA,"stop","S41F F70* P133K",3
"lib2","SARS-CoV-2","TGCAACGCCGTGATGA",3,40.98,10.51,-0.33,0.06,2.98,1.04,0,"1 nonsynonymous","S164F",1
"lib2","SARS-CoV-2","TGCAACGGCCGTCAGA",14,221.22,10.68,-0.16,0.03,2.93,1.07,0,"1 nonsynonymous","F160I",1
"lib2","SARS-CoV-2","TGCAACGGGACTTGAA",11,69.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G51N F70L S113C N120V P197S",5
"lib2","SARS-CoV-2","TGCAACGGTTGTAACT",5,28.83,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","F17S I104Q P133Q",3
"lib2","SARS-CoV-2","TGCAACGTATCGTACC",3,61.37,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D34G G117N R127D R136M Y143L F167N P177S",7
"lib2","SARS-CoV-2","TGCAACGTCGTAATCC",7,112.46,10.59,-0.24,0.02,2.93,1.06,0,">1 nonsynonymous","A22S E141F",2
"lib2","SARS-CoV-2","TGCAACTAATGTAACC",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N120W V180K",2
"lib2","SARS-CoV-2","TGCAACTCAAAACAAG",3,100.08,10.77,-0.06,0.03,3,1.01,0,"1 nonsynonymous","R78T",1
"lib2","SARS-CoV-2","TGCAACTGAGACTACC",8,15.43,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34P C49T C61T E135P V173M",5
"lib2","SARS-CoV-2","TGCAACTTAGATTTTA",3,38.37,8.88,-1.95,0.06,2,1.05,0,">1 nonsynonymous","A42E Y91D",2
"lib2","SARS-CoV-2","TGCAACTTATTATATA",3,22.52,10.99,0.15,0.05,2.95,1.05,0,"1 nonsynonymous","S200L",1
"lib2","SARS-CoV-2","TGCAACTTTGGCACAC",3,53.37,10.47,-0.36,0.06,2.71,1.09,0,">1 nonsynonymous","A22R W106M Q168H",3
"lib2","SARS-CoV-2","TGCAAGAAACTCTGGT",3,113.9,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R27K G51R W106S Q176L",4
"lib2","SARS-CoV-2","TGCAAGAAAGTCAGGG",2,23.67,10.83,0,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAAGAACTACAGCG",5,3.88,NA,NA,NA,NA,NA,NA,"stop","S19* I88V D97Y N157A P169S A190E",6
"lib2","SARS-CoV-2","TGCAAGAATAAACCTG",4,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14D S41I F99S G116W",4
"lib2","SARS-CoV-2","TGCAAGAATTCTGAGC",9,94.45,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","E10V D34R S41G G86Y R136V P161I",6
"lib2","SARS-CoV-2","TGCAAGACAATTCTCA",3,16.57,10.3,-0.54,0.08,2.89,1,0,">1 nonsynonymous","L5R S53E L60R V71K D90L W106S K132G Q176S",8
"lib2","SARS-CoV-2","TGCAAGACCTGACTTT",1,24.45,10.46,-0.37,0.06,2.89,1.13,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TGCAAGAGGCTATAGC",5,14.41,6.34,-4.5,0.59,1.5,1.19,0.03,">1 nonsynonymous","A14N Y66E Y93F",3
"lib2","SARS-CoV-2","TGCAAGATATTACACT",2,16.94,9.06,-1.78,0.25,1.5,1.04,0.02,"1 nonsynonymous","C49H",1
"lib2","SARS-CoV-2","TGCAAGATTAGTCACA",7,101.8,10.29,-0.55,0.05,2.7,1.06,0,">1 nonsynonymous","A33E C61R",2
"lib2","SARS-CoV-2","TGCAAGCACAATATAC",2,13.51,8.48,-2.36,0.16,2.72,1.07,0.01,">1 nonsynonymous","G146C Q168S",2
"lib2","SARS-CoV-2","TGCAAGCCAGTGGCAA",2,8.57,9.07,-1.76,0.21,1.74,1.05,0.02,">1 nonsynonymous","L60G S69T A81V",3
"lib2","SARS-CoV-2","TGCAAGCCATCGTTCG",3,37.69,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","I88W T100L F126D",3
"lib2","SARS-CoV-2","TGCAAGCGACCTTGTT",21,23.45,9.89,-0.95,0.32,2.22,1.05,0.03,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","TGCAAGCGATTTCGTG",10,1.35,NA,NA,NA,NA,NA,NA,"stop","L5W N58* C61* Y119P Y165S",5
"lib2","SARS-CoV-2","TGCAAGGAAGTGGTCA",16,147.66,10.79,-0.04,0.04,2.93,1.09,0,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","TGCAAGGATTCCACGA",4,37.38,9.46,-1.37,0.28,1.64,1.06,0.03,">1 nonsynonymous","Y35M A42P Y50T K128V",4
"lib2","SARS-CoV-2","TGCAAGGCTGCGCAAA",2,45.99,10.48,-0.36,0.06,2.89,1.1,0,">1 nonsynonymous","A105S N120F",2
"lib2","SARS-CoV-2","TGCAAGGGAACATCTG",18,106.12,9.89,-0.94,0.06,2.16,1.06,0,"1 nonsynonymous","F17S",1
"lib2","SARS-CoV-2","TGCAAGGTGGTGGTAC",1,81.61,9.97,-0.87,0.08,2.17,1.06,0,">1 nonsynonymous","N40P P133M",2
"lib2","SARS-CoV-2","TGCAAGGTTGCAGAGT",6,111.73,9.78,-1.06,0.08,2.52,1.07,0,">1 nonsynonymous","N4R Y35P T55G Q144P",4
"lib2","SARS-CoV-2","TGCAAGTACCTAGAGA",4,71.06,6,-4.84,1.71,1.5,1.11,0.01,">1 nonsynonymous","T55H Y93Q Y123V",3
"lib2","SARS-CoV-2","TGCAAGTCAAGGTAAA",2,8.67,10.3,-0.53,0.06,2.98,1.04,0,">1 nonsynonymous","K132L A145I",2
"lib2","SARS-CoV-2","TGCAAGTCACTTGTTA",1,8.27,10.41,-0.43,0.12,2.7,1.11,0.01,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","TGCAAGTCCATACCGC",6,95.6,10.85,0.01,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAAGTCGTCAAGAC",2,52.59,10.88,0.04,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAATAAAGCGTTGA",10,227,10.49,-0.35,0.03,2.89,1.1,0,">1 nonsynonymous","D75E N110L",2
"lib2","SARS-CoV-2","TGCAATAAAGGATGGT",7,168.32,10.28,-0.56,0.04,2.94,1.09,0,">1 nonsynonymous","D97L F156L",2
"lib2","SARS-CoV-2","TGCAATAAATAATATT",3,40.24,10.72,-0.12,0.04,2.96,1.03,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","TGCAATAAATATTATA",4,32.68,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","E10N K56R G86K A105T G116H",5
"lib2","SARS-CoV-2","TGCAATACAATAAGGA",1,61.32,9.91,-0.92,0.05,2.83,1.01,0,">1 nonsynonymous","V32A N110D I138K G152S",4
"lib2","SARS-CoV-2","TGCAATACACACGAGC",7,146.97,10.79,-0.05,0.04,2.85,1.09,0,"1 nonsynonymous","P54I",1
"lib2","SARS-CoV-2","TGCAATACATAAGTGT",3,0.2,NA,NA,NA,NA,NA,NA,"stop","S41Y D90S N118R Y123* N151H",5
"lib2","SARS-CoV-2","TGCAATATAAAAATAA",7,16.02,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D34R C49F P133Y",3
"lib2","SARS-CoV-2","TGCAATATAGACGCTG",3,57.55,10.12,-0.71,0.08,2.43,1.02,0,"1 nonsynonymous","A89I",1
"lib2","SARS-CoV-2","TGCAATATATAGATAA",7,128.06,10.91,0.07,0.06,2.85,1.1,0,"1 nonsynonymous","V37K",1
"lib2","SARS-CoV-2","TGCAATATCAGTCCAC",15,418.51,9.71,-1.13,0.06,2.55,1.03,0,">1 nonsynonymous","R27L Y35S G116T G196P",4
"lib2","SARS-CoV-2","TGCAATATTGGTGATT",3,28.68,10.86,0.03,0.04,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAATCAAAGATAAA",2,34.95,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","G172M L183I",2
"lib2","SARS-CoV-2","TGCAATCAAGCTCTTC",13,537.7,10.49,-0.35,0.03,2.91,1.04,0,"1 nonsynonymous","K26E",1
"lib2","SARS-CoV-2","TGCAATCACCCACGCA",2,17.87,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","L60S P96S I142G",3
"lib2","SARS-CoV-2","TGCAATCGAGTGGTGC",9,66.26,10.78,-0.05,0.07,2.94,1.1,0,"1 nonsynonymous","H189N",1
"lib2","SARS-CoV-2","TGCAATGGTGGAGTAG",12,115.77,9.85,-0.99,0.07,2.14,1.02,0,">1 nonsynonymous","S19K F99W",2
"lib2","SARS-CoV-2","TGCAATGTCATGACGA",6,0.99,NA,NA,NA,NA,NA,NA,"stop","F17* V77M",2
"lib2","SARS-CoV-2","TGCAATGTCATTGAGT",16,2.19,NA,NA,NA,NA,NA,NA,"stop","A14I P82V L95* Y123I F134L F156N V173P",7
"lib2","SARS-CoV-2","TGCAATGTTGAAAGTC",4,1059.79,8.21,-2.63,0.12,1.8,1.05,0.01,">1 nonsynonymous","Y21E Y119R",2
"lib2","SARS-CoV-2","TGCAATTAAAAATGCA",6,26.5,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","E76A I88W A105R Q144G V182E",5
"lib2","SARS-CoV-2","TGCAATTACCCGCATC",7,60.39,10.33,-0.51,0.07,2.69,1.1,0,"1 nonsynonymous","D90G",1
"lib2","SARS-CoV-2","TGCAATTAGAATTCAA",5,57.12,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","T3I F44S K56R Y119I L162V",5
"lib2","SARS-CoV-2","TGCAATTATAAATCAA",1,45.65,10.52,-0.32,0.05,2.98,1,0,"1 nonsynonymous","E10I",1
"lib2","SARS-CoV-2","TGCAATTCGTTTCCCA",18,181.22,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F8M S19M T55R R73T F126M E135S A145N G152C",8
"lib2","SARS-CoV-2","TGCAATTCTAAGTAAT",2,17.09,10.85,0.01,0.11,2.99,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAATTCTATTTAGC",2,23.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25I S53Q",2
"lib2","SARS-CoV-2","TGCAATTTAGGTCCAA",7,57.5,6.32,-4.51,0.6,1.5,1.13,0.03,">1 nonsynonymous","A42K D68L",2
"lib2","SARS-CoV-2","TGCACAAAACAACTTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6N T63* A81L T85F V115C N157R",6
"lib2","SARS-CoV-2","TGCACAAAACTAGATA",1,10.58,9.07,-1.77,0.14,2,1,0.01,">1 nonsynonymous","R127L T201A",2
"lib2","SARS-CoV-2","TGCACAAAATAAAAAC",2,17.27,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","K26P D97Y",2
"lib2","SARS-CoV-2","TGCACAAAATATTCAC",4,53.32,9.65,-1.19,0.37,1.5,1,0.06,">1 nonsynonymous","A33S G101M",2
"lib2","SARS-CoV-2","TGCACAAACGCGGAGG",2,54.57,10.75,-0.09,0.07,2.81,1.13,0,">1 nonsynonymous","T3Q D98E T201V",3
"lib2","SARS-CoV-2","TGCACAAATGGGCCAA",3,58.15,10.79,-0.04,0.05,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCACAACAAGTACTA",4,70.07,10.59,-0.25,0.04,2.97,1.02,0,">1 nonsynonymous","F62G Q84M",2
"lib2","SARS-CoV-2","TGCACAACGACTGACA",3,17.66,6,-4.84,2,3,1.05,0,">1 nonsynonymous","R27W K87E D97G C150V G155L",5
"lib2","SARS-CoV-2","TGCACAAGTCCTAACG",1,0.24,NA,NA,NA,NA,NA,NA,"stop","I28* P96A V103A",3
"lib2","SARS-CoV-2","TGCACAATACCATACG",3,45.39,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","A14K G86Y K128L",3
"lib2","SARS-CoV-2","TGCACAATTTAGTTCC",1,10.55,6,-4.84,2,3,1.02,0,">1 nonsynonymous","S45C E76V Q176R",3
"lib2","SARS-CoV-2","TGCACACACCGACGAA",1,1.57,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A14N",1
"lib2","SARS-CoV-2","TGCACACACGCCATAG",2,50.41,9.57,-1.26,0.09,2.03,1.03,0,">1 nonsynonymous","T15V F62R T100Y",3
"lib2","SARS-CoV-2","TGCACACATTTCCTTG",8,27.08,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","V32R C49P E154R S184A H189F",5
"lib2","SARS-CoV-2","TGCACACGCGATCCAG",2,75.08,10.78,-0.05,0.06,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCACACTAAACACTC",4,79.6,9.38,-1.46,0.04,2.96,1.08,0,">1 nonsynonymous","S36V T55D Y119G S164H",4
"lib2","SARS-CoV-2","TGCACACTCGAACGAC",6,8.03,NA,NA,NA,NA,NA,NA,"stop","L38M V65M T85R L125A F185P P197*",6
"lib2","SARS-CoV-2","TGCACACTCTCACGTC",3,15.86,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S43C L95S N157C",3
"lib2","SARS-CoV-2","TGCACACTTCCACCGC",11,121.02,9.93,-0.9,0.04,2.53,1,0,">1 nonsynonymous","Y123T F160S",2
"lib2","SARS-CoV-2","TGCACAGACGAATCCC",1,8.78,10.81,-0.03,0.12,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCACAGACTTGAGCA",4,90.75,10.1,-0.73,0.07,2.6,1.01,0,"1 nonsynonymous","A67S",1
"lib2","SARS-CoV-2","TGCACAGATGTAATAG",11,165.49,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S41R V52H N64L G83D",4
"lib2","SARS-CoV-2","TGCACAGGATTAGCCG",7,47.56,8.45,-2.39,0.13,1.85,1.07,0.01,">1 nonsynonymous","A14L G83C S147F G174L",4
"lib2","SARS-CoV-2","TGCACAGGTGAACCGT",2,80.64,9.94,-0.9,0.08,2.24,1.05,0,">1 nonsynonymous","I2F W106S",2
"lib2","SARS-CoV-2","TGCACAGTAATCAAAT",10,68.85,9.87,-0.96,0.1,2.48,1.01,0,">1 nonsynonymous","G9I A42T S139R Q144P",4
"lib2","SARS-CoV-2","TGCACAGTTGAGGAGA",2,15.55,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","S41E A89V W106A C150E",4
"lib2","SARS-CoV-2","TGCACATAAATTATCA",3,40.35,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N1R T15N K132R Y159S Q168V",5
"lib2","SARS-CoV-2","TGCACATACGTTACTG",3,35,6.95,-3.89,0.16,1.5,1.05,0,">1 nonsynonymous","F62S G86W",2
"lib2","SARS-CoV-2","TGCACATCACAAGGCT",3,38.66,10.23,-0.6,0.07,2.83,1.01,0,">1 nonsynonymous","L57S T201G",2
"lib2","SARS-CoV-2","TGCACATCATTACAAT",12,61.66,6,-4.84,2,3,1.18,0,">1 nonsynonymous","F8T R16A C49L L60V F99N Y123N",6
"lib2","SARS-CoV-2","TGCACATCCCATAACT",2,15.13,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A14R N107H D112T L122S I142S P149W",6
"lib2","SARS-CoV-2","TGCACATCTATTCAAT",8,90.08,9.66,-1.18,0.06,1.93,1.07,0,">1 nonsynonymous","T3K V37F S43D A105D",4
"lib2","SARS-CoV-2","TGCACATGATTGGGTA",1,28.14,9.93,-0.9,0.13,2.5,1.02,0.01,">1 nonsynonymous","A14P A42S",2
"lib2","SARS-CoV-2","TGCACATGTGAGCATT",2,144.03,10.16,-0.68,0.02,2.94,1.06,0,"1 nonsynonymous","F156K",1
"lib2","SARS-CoV-2","TGCACCAAATATTTAG",4,61.58,10.8,-0.03,0.04,2.86,1.11,0,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","TGCACCAAATCGCGAA",5,0.74,NA,NA,NA,NA,NA,NA,"stop","C6S A33K S113V P149*",4
"lib2","SARS-CoV-2","TGCACCAAGACTACCT",4,105.29,10.77,-0.06,0.05,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCACCAAGTCGACAC",8,3.4,NA,NA,NA,NA,NA,NA,"stop","D59* D90S K128R Q168A",4
"lib2","SARS-CoV-2","TGCACCAGTATTATCA",2,59.33,10.67,-0.17,0.03,2.99,1,0,"1 nonsynonymous","S41L",1
"lib2","SARS-CoV-2","TGCACCATCTCGATAA",5,0,NA,NA,NA,NA,NA,NA,"stop","N40C Q176*",2
"lib2","SARS-CoV-2","TGCACCCCGCCCAAAC",18,312.91,9.93,-0.91,0.08,2.19,1.05,0,">1 nonsynonymous","Y91R I142M",2
"lib2","SARS-CoV-2","TGCACCCGAGAAATTG",1,36,10.52,-0.32,0.08,2.75,1.25,0,">1 nonsynonymous","I2Q S147F",2
"lib2","SARS-CoV-2","TGCACCCTTGAGTTAC",13,167.65,8.29,-2.55,0.1,2.45,1.07,0,">1 nonsynonymous","E141S A145V P149S F160L T170H",5
"lib2","SARS-CoV-2","TGCACCGAGCCTGGGA",4,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73F G146M G152L",3
"lib2","SARS-CoV-2","TGCACCGCCAAGCACA",1,19.02,6.32,-4.52,0.66,1.5,1.11,0.03,">1 nonsynonymous","Y35T S41R T46F F99C W106P",5
"lib2","SARS-CoV-2","TGCACCGGCAAGAACC",4,6.11,NA,NA,NA,NA,NA,NA,"stop","V37* Y50C L122K",3
"lib2","SARS-CoV-2","TGCACCTAAAACTCAC",6,92.44,10.71,-0.13,0.02,2.93,1.05,0,">1 nonsynonymous","D97R K128P",2
"lib2","SARS-CoV-2","TGCACCTAAAATGATC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11K L162H",2
"lib2","SARS-CoV-2","TGCACCTCGAAATTAA",1,15.5,9.88,-0.96,0.09,2.95,1.02,0,"1 nonsynonymous","G146T",1
"lib2","SARS-CoV-2","TGCACGAACAAAGACA",5,84.12,9.92,-0.92,0.04,2.93,1.05,0,">1 nonsynonymous","T100L N171G",2
"lib2","SARS-CoV-2","TGCACGATTCCATATA",3,11.2,10.51,-0.32,0.07,2.96,1.09,0,">1 nonsynonymous","G9S Y21F T63Y T100F K114Q",5
"lib2","SARS-CoV-2","TGCACGCAGCCGATCT",5,111.98,7.45,-3.39,0.16,1.52,1.11,0.01,"1 nonsynonymous","G86L",1
"lib2","SARS-CoV-2","TGCACGCCGGCCCTTA",10,9.32,10.78,-0.05,0.24,2.49,1,0.04,">1 nonsynonymous","N64M V103L N107L N171M T201R",5
"lib2","SARS-CoV-2","TGCACGGAAATTGACA",10,10.98,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","V11I Y50T K114L V182N",4
"lib2","SARS-CoV-2","TGCACGGCAGTAGGCG",2,15.89,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","S41M V77M N120Q S139P",4
"lib2","SARS-CoV-2","TGCACGGCGCAGAATC",2,45.97,10.09,-0.75,0.14,2.69,1.15,0.01,">1 nonsynonymous","A42L I142H",2
"lib2","SARS-CoV-2","TGCACGGGACTAGATA",2,30.2,10.75,-0.08,0.09,2.72,1.27,0,"1 nonsynonymous","Q84T",1
"lib2","SARS-CoV-2","TGCACGGGCAGAATGC",5,23.09,6.31,-4.53,0.42,1.5,1.11,0.01,">1 nonsynonymous","F62M N92M D98N K128V A190D",5
"lib2","SARS-CoV-2","TGCACGTAATACCGTA",2,2.14,NA,NA,NA,NA,NA,NA,"stop","F44W Y50* V77K D90E P197*",5
"lib2","SARS-CoV-2","TGCACGTTATCCGAAG",4,35.37,6.2,-4.64,0.95,1.5,1.2,0.03,">1 nonsynonymous","C31K N40I D59W",3
"lib2","SARS-CoV-2","TGCACGTTCGTATCGG",5,65.03,10.79,-0.05,0.06,2.84,1.12,0,"1 nonsynonymous","D75A",1
"lib2","SARS-CoV-2","TGCACGTTGCAACAGA",7,94.48,10.07,-0.77,0.08,2.56,1.08,0,">1 nonsynonymous","V77M A89S",2
"lib2","SARS-CoV-2","TGCACTAACATTAAAA",6,6.08,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3C D34N L38R L60S V65W F156P N171L",7
"lib2","SARS-CoV-2","TGCACTAATAATATTC",1,1.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F134I K198L",2
"lib2","SARS-CoV-2","TGCACTAATACTTATT",17,278.67,9.83,-1.01,0.07,2.55,1.03,0,">1 nonsynonymous","F8T Y35F N120V",3
"lib2","SARS-CoV-2","TGCACTACAAAATTTT",3,10.88,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S43T G116L G146E V181G",4
"lib2","SARS-CoV-2","TGCACTACAAGGTCTT",1,18.32,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T55G D112Y G152I",3
"lib2","SARS-CoV-2","TGCACTACATTTTATT",9,140.48,9.52,-1.32,0.04,2.83,1.12,0,">1 nonsynonymous","Y35I Y119R G166L",3
"lib2","SARS-CoV-2","TGCACTACCAAGTGCG",9,79.43,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y119S Y143D",2
"lib2","SARS-CoV-2","TGCACTAGATCAAGCA",2,27.24,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A22F G86V P96A",3
"lib2","SARS-CoV-2","TGCACTATACTGATAG",9,78.78,7.85,-2.98,0.18,1.61,1.14,0.01,"1 nonsynonymous","D112F",1
"lib2","SARS-CoV-2","TGCACTATATGACTGC",3,0.17,NA,NA,NA,NA,NA,NA,"stop","S53C Q176* V180F",3
"lib2","SARS-CoV-2","TGCACTATTTAAGGAA",1,82.42,10.71,-0.12,0.04,2.98,1.03,0,"1 nonsynonymous","N120Y",1
"lib2","SARS-CoV-2","TGCACTCACTGTAAAT",13,365.52,10.58,-0.26,0.04,2.91,1.08,0,"1 nonsynonymous","Q144T",1
"lib2","SARS-CoV-2","TGCACTCATGCGGATC",1,11.74,9.92,-0.92,0.17,1.98,1.08,0.01,">1 nonsynonymous","P82I S113A K199S",3
"lib2","SARS-CoV-2","TGCACTCATTGGTAAA",4,14.43,7.73,-3.11,0.37,1.5,1.08,0.04,">1 nonsynonymous","A14T V52F L60T A89S P169Y G174W K198T",7
"lib2","SARS-CoV-2","TGCACTCCTTCTGATA",10,53.52,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N24S L38P D90S P161Y",4
"lib2","SARS-CoV-2","TGCACTCTATGTATGA",11,243.15,10.85,0.01,0.04,2.96,1.05,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","TGCACTCTGCGAAACT",3,0.38,NA,NA,NA,NA,NA,NA,"stop","C61G G86D A105* N157S L188R",5
"lib2","SARS-CoV-2","TGCACTCTTACACACG",2,37.36,7.18,-3.65,0.51,1.5,1.16,0.08,">1 nonsynonymous","W23C T55D D68N D90S Y119P R136L K198G",7
"lib2","SARS-CoV-2","TGCACTGAAATCTGAG",5,71.31,10.69,-0.14,0.04,2.9,1.05,0,"1 nonsynonymous","E141I",1
"lib2","SARS-CoV-2","TGCACTGACCGCTTAT",12,3.27,NA,NA,NA,NA,NA,NA,"stop","I104* F185T",2
"lib2","SARS-CoV-2","TGCACTGATAGTATCT",5,106.26,8.43,-2.41,0.11,2.05,1.08,0,">1 nonsynonymous","G74R T85M I142V",3
"lib2","SARS-CoV-2","TGCACTGCAGAGTTAA",3,0.42,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGCACTGGTACTTACA",2,28.67,10.33,-0.5,0.08,2.8,1.08,0,">1 nonsynonymous","S36H F47L",2
"lib2","SARS-CoV-2","TGCACTGTATAAAAAA",5,99.28,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I88V G117A Y143C",3
"lib2","SARS-CoV-2","TGCACTGTATTGATCC",10,146.57,9.19,-1.65,0.06,2.39,1.05,0,">1 nonsynonymous","S43I D59F Q144S G152V",4
"lib2","SARS-CoV-2","TGCACTGTTTCCGTAG",2,21.25,10.5,-0.34,0.13,2.65,1.04,0.01,">1 nonsynonymous","D59Y Q79H L122A N151M S184V",5
"lib2","SARS-CoV-2","TGCACTTAGGCTGGAG",3,34.67,6,-4.84,2,3,1.23,0,"1 nonsynonymous","L162P",1
"lib2","SARS-CoV-2","TGCACTTATTCAGGTA",3,2.61,NA,NA,NA,NA,NA,NA,"stop","R16N F99K V173*",3
"lib2","SARS-CoV-2","TGCACTTCAGCAAAAG",2,0.04,NA,NA,NA,NA,NA,NA,"stop","A14E Y91* P96R G117I",4
"lib2","SARS-CoV-2","TGCACTTCGATACGGT",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52I D90I K114W P161L",4
"lib2","SARS-CoV-2","TGCACTTCTATATAAA",2,17.1,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Q84P N107F",2
"lib2","SARS-CoV-2","TGCACTTGGCTACATA",5,423.37,10.71,-0.13,0.03,2.99,1.03,0,">1 nonsynonymous","C61H D97N",2
"lib2","SARS-CoV-2","TGCACTTTAAAGAAGG",9,110.27,10.85,0.02,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCACTTTTAATCCCA",6,73.06,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4T G86V",2
"lib2","SARS-CoV-2","TGCAGAAAATTAGAAA",4,21.15,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L60P A81F",2
"lib2","SARS-CoV-2","TGCAGAAGGACACATA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69Q F134Y G146W G166C",4
"lib2","SARS-CoV-2","TGCAGAATATATTAGG",4,136.83,10.83,-0.01,0.03,2.97,1.05,0,"1 nonsynonymous","N40S",1
"lib2","SARS-CoV-2","TGCAGAATCAAACTAA",2,13.22,10.75,-0.09,0.09,2.73,1.3,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGAATCAAATCCA",5,16.03,10.81,-0.02,0.09,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGAATGCTCACAT",7,79.22,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F12L S41R V180H",3
"lib2","SARS-CoV-2","TGCAGAATTTCTGATG",4,55.81,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F8S W23L S29K N64C D98R V115N Q163T C195L K199M",9
"lib2","SARS-CoV-2","TGCAGACACGGGTTTG",1,99.32,10.2,-0.63,0.05,2.75,1.07,0,">1 nonsynonymous","I2D D34H",2
"lib2","SARS-CoV-2","TGCAGACCTAAACGAG",6,157.41,8.43,-2.41,0.07,2.61,1.1,0,">1 nonsynonymous","A42D L122I Y143T",3
"lib2","SARS-CoV-2","TGCAGACCTATGTATC",6,39.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F99T G146S G174L",3
"lib2","SARS-CoV-2","TGCAGACCTCAACAGG",2,26.3,10.76,-0.08,0.06,2.88,1.16,0,">1 nonsynonymous","S29R G83R",2
"lib2","SARS-CoV-2","TGCAGACGGCAGGAAA",5,20,6.4,-4.43,0.7,1.5,1.07,0.05,">1 nonsynonymous","I72M Q84A P96D G116Y L125R",5
"lib2","SARS-CoV-2","TGCAGACTAAGCCATA",1,8.3,6,-4.84,2,3,1.07,0,">1 nonsynonymous","L5R F44C P54S C61Q K94T R136N",6
"lib2","SARS-CoV-2","TGCAGACTAATTATAT",1,9.56,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y93N E141H S200W",3
"lib2","SARS-CoV-2","TGCAGAGATTAAACCA",29,248.1,9.73,-1.11,0.08,2.09,1.05,0,">1 nonsynonymous","L60V A105I",2
"lib2","SARS-CoV-2","TGCAGAGGATCAGTAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4D G51*",2
"lib2","SARS-CoV-2","TGCAGAGGGTTAGTGC",1,5.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55N P82S G101N",3
"lib2","SARS-CoV-2","TGCAGATGCCAAAGGA",2,40.66,10.6,-0.24,0.05,2.93,1.08,0,">1 nonsynonymous","R27M T46S",2
"lib2","SARS-CoV-2","TGCAGATTAAGAAACT",8,1.23,NA,NA,NA,NA,NA,NA,"stop","R127V T148*",2
"lib2","SARS-CoV-2","TGCAGATTCTATTGAA",5,24.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4Y V71E C195F T201E",4
"lib2","SARS-CoV-2","TGCAGCAACTATATGA",3,49.56,10.2,-0.64,0.04,2.92,1.02,0,"1 nonsynonymous","C31R",1
"lib2","SARS-CoV-2","TGCAGCAAGGAAATTA",4,1.21,NA,NA,NA,NA,NA,NA,"stop","I80W D98S L122* G155R",4
"lib2","SARS-CoV-2","TGCAGCACGCTAAATG",8,176.44,10.82,-0.02,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGCAGGTTGACGA",5,80.82,9.6,-1.24,0.06,1.98,1.04,0,">1 nonsynonymous","F12L L38T",2
"lib2","SARS-CoV-2","TGCAGCCAACTATCCG",4,49.08,10.8,-0.04,0.05,3,1.02,0,">1 nonsynonymous","A18P A42V P54I",3
"lib2","SARS-CoV-2","TGCAGCCAGCAATGCT",11,106.42,10.75,-0.08,0.05,2.93,1.09,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","TGCAGCCCCGCACGTA",2,3.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2H G83L K114N S129I",4
"lib2","SARS-CoV-2","TGCAGCCCGAAATAAA",10,68.91,10.84,0,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGCCGTGTAATGC",3,78.06,10.29,-0.54,0.04,2.9,1,0,">1 nonsynonymous","N40P D59R A190I",3
"lib2","SARS-CoV-2","TGCAGCCTTCCTGAAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45L G51R G166M G172R",4
"lib2","SARS-CoV-2","TGCAGCGAGCTCACAA",3,0.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I K48T",2
"lib2","SARS-CoV-2","TGCAGCGTGGGCCATA",3,23.79,9.83,-1.01,0.1,2.54,1,0,">1 nonsynonymous","C31F T55K D90S",3
"lib2","SARS-CoV-2","TGCAGCTAACAGCGCT",5,64.91,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","G51N N107Y N157L F167Q",4
"lib2","SARS-CoV-2","TGCAGCTCTAACTATT",3,82.88,10.54,-0.3,0.04,2.9,1.09,0,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","TGCAGCTTATCGATAC",3,25.75,10.15,-0.69,0.04,3,1,0,"1 nonsynonymous","N118S",1
"lib2","SARS-CoV-2","TGCAGGAACTTAAGGG",4,28.32,9.99,-0.85,0.08,2.37,1.11,0,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","TGCAGGAATTCTTCAT",9,1.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V D90W L122T",3
"lib2","SARS-CoV-2","TGCAGGACAGAGCTGT",10,83.78,6.05,-4.79,0.47,1.5,1.09,0,">1 nonsynonymous","V77A N107I",2
"lib2","SARS-CoV-2","TGCAGGACATACGACG",2,53.24,8.28,-2.56,0.13,2.78,1.14,0.01,">1 nonsynonymous","N107K F126Y",2
"lib2","SARS-CoV-2","TGCAGGAGCGTAGACA",28,281.69,10.78,-0.05,0.03,2.91,1.08,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","TGCAGGAGCTTAGTTA",2,20.52,6.02,-4.82,1.16,1.5,1.16,0.02,">1 nonsynonymous","G86L K198C",2
"lib2","SARS-CoV-2","TGCAGGCACGAGACAT",5,74.65,10.63,-0.2,0.05,2.89,1.1,0,">1 nonsynonymous","T100M I104L E141G",3
"lib2","SARS-CoV-2","TGCAGGCATACATATT",6,117.45,9.76,-1.08,0.04,2,1.04,0,"1 nonsynonymous","W23S",1
"lib2","SARS-CoV-2","TGCAGGCCAATTTAGG",9,84.34,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G86F N120W",2
"lib2","SARS-CoV-2","TGCAGGCCATAATTGA",15,186.89,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F17T G117M P149E T201L",4
"lib2","SARS-CoV-2","TGCAGGCCTTCATTAA",9,16.48,10.87,0.03,0.05,2.91,1.05,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","TGCAGGCTAATTACTG",1,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L K128L P169C",3
"lib2","SARS-CoV-2","TGCAGGCTCTCATCTT",1,1.34,NA,NA,NA,NA,NA,NA,"stop","F62H T85P N120T P161*",4
"lib2","SARS-CoV-2","TGCAGGGCATGTACAA",14,26.95,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","G152T V182E",2
"lib2","SARS-CoV-2","TGCAGGGCTTATTACT",8,24.99,6.24,-4.6,0.84,1.5,1.08,0.05,">1 nonsynonymous","V52G G86V P149D",3
"lib2","SARS-CoV-2","TGCAGGTACACAAGCG",1,40.96,10.37,-0.47,0.08,2.83,1,0,">1 nonsynonymous","S29G N40A D90S",3
"lib2","SARS-CoV-2","TGCAGTAACTCTTACA",7,184.08,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Q79P Y123A S139F C150A V153G",5
"lib2","SARS-CoV-2","TGCAGTAATTATATAT",4,9.78,NA,NA,NA,NA,NA,NA,"stop","F12L W106E K132F Q168S S184*",5
"lib2","SARS-CoV-2","TGCAGTATTAATATAA",10,40.33,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G83R V103H S129R F160Y",4
"lib2","SARS-CoV-2","TGCAGTCGATCCTAAC",16,89.16,10.75,-0.08,0.06,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGTCTCCAGCGAG",6,45.38,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A105L R127Q D137Y",3
"lib2","SARS-CoV-2","TGCAGTCTGAAACTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","K48R N58* F99K",3
"lib2","SARS-CoV-2","TGCAGTCTTATCAAAC",7,61.26,9.05,-1.79,0.12,1.5,1.17,0.01,">1 nonsynonymous","G9R P82K",2
"lib2","SARS-CoV-2","TGCAGTGACAGAATTG",5,81.96,10.81,-0.03,0.06,2.79,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCAGTGATAATAAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* F44V C61K W106A S113W E135T E141L",7
"lib2","SARS-CoV-2","TGCAGTTGCGGTTAGA",6,54.66,10.81,-0.03,0.06,2.97,1.04,0,"1 nonsynonymous","I2G",1
"lib2","SARS-CoV-2","TGCATAAAGGGAAGAG",5,26.98,9.76,-1.08,0.14,2.04,1.1,0.01,">1 nonsynonymous","F62L R78C D90I",3
"lib2","SARS-CoV-2","TGCATAAAGTCAGAAT",7,4.34,NA,NA,NA,NA,NA,NA,"stop","N4T I104*",2
"lib2","SARS-CoV-2","TGCATAACAAATTTAT",1,35.36,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N4K Y35T V103P F134Y E141S C150M P161A F167S",8
"lib2","SARS-CoV-2","TGCATAACATAAGACG",5,49.17,6,-4.84,2,3,1.23,0,">1 nonsynonymous","A14V L57T N107E",3
"lib2","SARS-CoV-2","TGCATAACATATTATA",17,212.1,9.37,-1.46,0.05,1.86,1.09,0,">1 nonsynonymous","T46Y A105I S129C",3
"lib2","SARS-CoV-2","TGCATAACGAAATATG",2,0.02,NA,NA,NA,NA,NA,NA,"stop","L122* Y165C",2
"lib2","SARS-CoV-2","TGCATAACTATTACTA",3,1.17,NA,NA,NA,NA,NA,NA,"stop","L5P F17* T55F A67L P169M",5
"lib2","SARS-CoV-2","TGCATAAGAAACTGGA",21,178.52,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6Q N30D V52R R127C S164L S200R",6
"lib2","SARS-CoV-2","TGCATAAGAACATATC",6,121.78,10.9,0.06,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCATAAGGCGAGACT",4,31.8,10.77,-0.07,0.09,2.85,1.15,0,"1 nonsynonymous","T63R",1
"lib2","SARS-CoV-2","TGCATAATATGACGGG",4,24.52,8.35,-2.49,0.18,2.5,1.08,0.01,">1 nonsynonymous","G83N S113L",2
"lib2","SARS-CoV-2","TGCATAATGCAAATAC",3,56.75,10.86,0.03,0.05,3,1.04,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","TGCATACAGGACGAAA",11,71.43,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40C C49S A105R Q144K",4
"lib2","SARS-CoV-2","TGCATACATTGGTGGT",5,117.16,10.44,-0.4,0.05,2.85,1.05,0,">1 nonsynonymous","Y35F R136N",2
"lib2","SARS-CoV-2","TGCATACCTTCGCCAC",6,17.54,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S53F K94P",2
"lib2","SARS-CoV-2","TGCATACTCGAAAGTA",15,108.46,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","C31N V37A G86F",3
"lib2","SARS-CoV-2","TGCATACTTCACCTAA",5,26.65,6,-4.84,2,3,1.21,0.03,">1 nonsynonymous","G83V F99T F134K N171Q T201S",5
"lib2","SARS-CoV-2","TGCATAGAAGACACTC",10,65.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6F C61P K94M V115P P177L",5
"lib2","SARS-CoV-2","TGCATAGAGTAGCGGC",6,10.9,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S41I Y50N G146R",3
"lib2","SARS-CoV-2","TGCATAGATAACAGAG",7,51.04,10.27,-0.57,0.05,2.89,1,0,">1 nonsynonymous","F62H E141I Q163S",3
"lib2","SARS-CoV-2","TGCATAGCCAAAAAGT",9,0.11,NA,NA,NA,NA,NA,NA,"stop","R136S P197*",2
"lib2","SARS-CoV-2","TGCATAGCGGTTGCAG",6,12.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","TGCATAGGGCTTAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6T F12* Y123S",3
"lib2","SARS-CoV-2","TGCATAGGTAACGATT",2,20.18,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","T3L R27W C61R D98Y P161V",5
"lib2","SARS-CoV-2","TGCATATAAAGAATAC",7,38.12,9.32,-1.51,0.06,2.12,1.05,0,"1 nonsynonymous","G86N",1
"lib2","SARS-CoV-2","TGCATATAAGGTCTAG",4,112.07,8.87,-1.97,0.07,2.73,1.11,0,">1 nonsynonymous","R16C G116C",2
"lib2","SARS-CoV-2","TGCATATAGATCAGCT",5,0.3,NA,NA,NA,NA,NA,NA,"stop","N13F I28*",2
"lib2","SARS-CoV-2","TGCATATATGAAAAGC",3,70.67,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F12L F47L S147L N157Y V182L",5
"lib2","SARS-CoV-2","TGCATATCTCTGAATT",3,17.18,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","V52W D98E C102Q",3
"lib2","SARS-CoV-2","TGCATATTATGACAGT",3,34.84,10.62,-0.21,0.06,2.89,1.12,0,"1 nonsynonymous","Y121L",1
"lib2","SARS-CoV-2","TGCATATTTATTTAAA",1,5.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V S36Y C49L I80C G116V Y119G S184I",7
"lib2","SARS-CoV-2","TGCATATTTTTTGCGG",1,20.83,10.97,0.14,0.07,3,1.01,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","TGCATCAATAAGACAA",3,36.31,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G9E L95T Y123M Y165E",4
"lib2","SARS-CoV-2","TGCATCAGCTAAAAAT",1,13.01,8.68,-2.15,0.16,2.83,1.04,0.01,">1 nonsynonymous","A33T T170L",2
"lib2","SARS-CoV-2","TGCATCAGGAATTCTC",11,226.25,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","K48R S113P Y178G",3
"lib2","SARS-CoV-2","TGCATCAGGCGTTAGG",5,61.49,7.61,-3.23,0.12,1.5,1.09,0,">1 nonsynonymous","K26I N118F G152F",3
"lib2","SARS-CoV-2","TGCATCATATTAGACA",11,31.62,10.15,-0.69,0.15,2.28,1.08,0.01,">1 nonsynonymous","G9Q I138T",2
"lib2","SARS-CoV-2","TGCATCCAAGCGAAGC",1,7.23,6,-4.84,2,1.5,1.04,0.03,">1 nonsynonymous","S139C C150W",2
"lib2","SARS-CoV-2","TGCATCCAATGCCATA",4,75.66,10.58,-0.25,0.12,2.65,1.15,0,">1 nonsynonymous","D98H N151K T201K",3
"lib2","SARS-CoV-2","TGCATCCACTCAGGCG",10,159.16,10.21,-0.63,0.07,2.38,1,0,">1 nonsynonymous","K26T W106T P149S",3
"lib2","SARS-CoV-2","TGCATCCCACAACCCG",9,167.65,8.82,-2.02,0.05,2.95,1.06,0,">1 nonsynonymous","G9N A33G F126Q",3
"lib2","SARS-CoV-2","TGCATCCGACTCGATG",3,42.03,10.8,-0.03,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCATCCGATATTACC",8,57.51,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","F62R P82F D90Y L95R Q176E",5
"lib2","SARS-CoV-2","TGCATCCTAACAATAA",1,8.5,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","S29L Y66F N151C G166P Y178H",5
"lib2","SARS-CoV-2","TGCATCCTTTACCCTT",1,19.67,7.23,-3.61,0.34,1.5,1.06,0.04,">1 nonsynonymous","V71S K94N A105K",3
"lib2","SARS-CoV-2","TGCATCGACAATCTGT",20,439.09,10.78,-0.06,0.04,2.95,1.07,0,"1 nonsynonymous","S29K",1
"lib2","SARS-CoV-2","TGCATCGATGGCAGAC",1,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62M A89V",2
"lib2","SARS-CoV-2","TGCATCTAGAGACTCC",5,46.66,8.71,-2.12,0.12,1.78,1.16,0.01,">1 nonsynonymous","A81N T140N T148W",3
"lib2","SARS-CoV-2","TGCATCTGTGGCGATA",1,24.22,9.91,-0.93,0.13,2.12,1.15,0.01,">1 nonsynonymous","L60R S139Y",2
"lib2","SARS-CoV-2","TGCATGAAAACATTAT",2,14,8.19,-2.65,0.29,1.5,1.04,0.03,">1 nonsynonymous","Y21L L38A",2
"lib2","SARS-CoV-2","TGCATGAAACTGTGGC",1,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102R C158N P197I",3
"lib2","SARS-CoV-2","TGCATGAGAACAAACA",5,91.41,10.86,0.02,0.05,2.87,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCATGAGATAAGAAT",16,175.09,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F12K D59C D68M E141V S164W",5
"lib2","SARS-CoV-2","TGCATGAGGAGCTGGA",1,67.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S43T Y121I P177F",3
"lib2","SARS-CoV-2","TGCATGATATTTAAAT",20,82.48,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D98N V103Y Y119L Q163I",4
"lib2","SARS-CoV-2","TGCATGATTGACACGA",7,1.6,NA,NA,NA,NA,NA,NA,"stop","T3L K26C D68V H189* T201N",5
"lib2","SARS-CoV-2","TGCATGCGTGCCATAG",3,28.8,10.43,-0.4,0.06,3,1.03,0,">1 nonsynonymous","T55D A81T Q168A",3
"lib2","SARS-CoV-2","TGCATGGCAATAATGA",8,156.5,10.83,-0.01,0.04,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCATGTAAGTGGACA",2,3.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58F Y91L R127V Y159L K198M",5
"lib2","SARS-CoV-2","TGCATGTCAACGTGCG",1,46.11,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N1M V37K G51T F62H D90I R124Y Y175F",7
"lib2","SARS-CoV-2","TGCATGTTCCCACAAA",6,17,6,-4.84,0.46,2.69,1.03,0,">1 nonsynonymous","T100H R136P C150M",3
"lib2","SARS-CoV-2","TGCATGTTTGATACAA",1,11.76,10.61,-0.23,0.16,2.8,1.23,0.01,"1 nonsynonymous","F160P",1
"lib2","SARS-CoV-2","TGCATTAACCGAACCT",5,52.95,10.55,-0.28,0.06,2.8,1.18,0,">1 nonsynonymous","T3G S43K",2
"lib2","SARS-CoV-2","TGCATTAACGATCGTA",1,0.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14V L122G N157S L183Q",4
"lib2","SARS-CoV-2","TGCATTAAGAATGCAT",10,122.78,10.71,-0.13,0.05,2.9,1.12,0,"1 nonsynonymous","V173A",1
"lib2","SARS-CoV-2","TGCATTAGAAATGCTA",5,104.17,8.41,-2.43,0.12,2.81,1.13,0.01,">1 nonsynonymous","R73M G83Q Y119S",3
"lib2","SARS-CoV-2","TGCATTAGTAAAACTG",3,2.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L G74D Y91L E141V Q168S",5
"lib2","SARS-CoV-2","TGCATTAGTACAAAGT",2,21.2,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","G83T F99S N107P",3
"lib2","SARS-CoV-2","TGCATTAGTGCAAATC",2,17,10.7,-0.13,0.07,3,1.03,0,">1 nonsynonymous","S43P L122Y",2
"lib2","SARS-CoV-2","TGCATTATCAAGGAGT",1,12.6,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y143K G155S",2
"lib2","SARS-CoV-2","TGCATTATCCATCAAA",2,0.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H A33Y Y50V F99K T148Y K198P",6
"lib2","SARS-CoV-2","TGCATTATCCCAGAAG",3,22.38,9.73,-1.1,0.09,2.97,1.07,0,"1 nonsynonymous","N118G",1
"lib2","SARS-CoV-2","TGCATTATCGTATGTA",3,16.76,10.62,-0.21,0.08,2.87,1.14,0,">1 nonsynonymous","S29K C61I T201V",3
"lib2","SARS-CoV-2","TGCATTATTATATTGT",1,19.01,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","W23L A89C",2
"lib2","SARS-CoV-2","TGCATTCACATGAACC",3,27.34,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","S29V D97A V173N V182P",4
"lib2","SARS-CoV-2","TGCATTCCGCCTAAAA",3,44.81,10.3,-0.53,0.06,2.81,1.04,0,">1 nonsynonymous","T15G N40S T201M",3
"lib2","SARS-CoV-2","TGCATTCGATATCACA",2,27.54,10.79,-0.04,0.06,3,1.02,0,">1 nonsynonymous","G9S Y35W E154G",3
"lib2","SARS-CoV-2","TGCATTCGTATTATAA",2,25.42,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","V32L A81R N92Q S113T N157K",5
"lib2","SARS-CoV-2","TGCATTCTAGAGGACA",1,14.04,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","G86P I138L C158I",3
"lib2","SARS-CoV-2","TGCATTCTATAAGTCC",19,5.45,NA,NA,NA,NA,NA,NA,"stop","P54W I88S Y143*",3
"lib2","SARS-CoV-2","TGCATTCTTCATCCAC",3,33.27,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K56P G101L Y123P",3
"lib2","SARS-CoV-2","TGCATTGCTTGAAGGG",3,7.26,9.22,-1.62,0.19,2.89,1.21,0.01,">1 nonsynonymous","S41D Y119V",2
"lib2","SARS-CoV-2","TGCATTGTAAGAATAA",12,133.51,9.41,-1.43,0.04,2.94,1.09,0,">1 nonsynonymous","Y119G T201R",2
"lib2","SARS-CoV-2","TGCATTTAATAGGGAA",1,16.91,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","F8Y F70R G101L",3
"lib2","SARS-CoV-2","TGCATTTACACCGATA",2,26.21,10.62,-0.21,0.09,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCATTTATAAATGGA",1,9.05,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","S139I F167A G174S",3
"lib2","SARS-CoV-2","TGCATTTATAACTATC",13,1.89,NA,NA,NA,NA,NA,NA,"stop","N40* C61R P96T V115Q",4
"lib2","SARS-CoV-2","TGCATTTTATAACGAG",3,83.41,10.87,0.04,0.05,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCAAAAATTGAAGT",1,10.84,8.53,-2.3,0.21,2.79,1.12,0.01,">1 nonsynonymous","Q144S Q168K",2
"lib2","SARS-CoV-2","TGCCAAAAGACCAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","A81V D90S P161* K198T",4
"lib2","SARS-CoV-2","TGCCAAAATATTACAC",4,37.24,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R25E S36M C61K I104K Y143T P161Q",6
"lib2","SARS-CoV-2","TGCCAAACGTAACAAA",1,16.6,9.62,-1.21,0.16,2.05,1.11,0.02,">1 nonsynonymous","N24S K128G P161E",3
"lib2","SARS-CoV-2","TGCCAAACTTGTTCCC",6,65.25,9.83,-1.01,0.07,2.31,1,0,">1 nonsynonymous","N1K L57R V173H",3
"lib2","SARS-CoV-2","TGCCAAATAACGCACG",3,38.16,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y91N D112H Y121A S139E",4
"lib2","SARS-CoV-2","TGCCAAATTATCAAAA",4,6.26,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","T15N P96W",2
"lib2","SARS-CoV-2","TGCCAACAAAAAATAC",3,76.43,10.52,-0.31,0.05,2.95,1.03,0,">1 nonsynonymous","G9L N64C F160A",3
"lib2","SARS-CoV-2","TGCCAACAATGACCAG",1,9.46,9.43,-1.41,0.06,3,1,0,">1 nonsynonymous","S41F N157A",2
"lib2","SARS-CoV-2","TGCCAACAATTTAAAT",2,79.03,10.36,-0.48,0.03,2.84,1.05,0,"1 nonsynonymous","E135N",1
"lib2","SARS-CoV-2","TGCCAACATTTGCCCA",14,1.87,NA,NA,NA,NA,NA,NA,"stop","C6G A18H F99R S129F Y175*",5
"lib2","SARS-CoV-2","TGCCAACCAACCCGTT",3,68.86,9.32,-1.51,0.03,3,1.03,0,">1 nonsynonymous","N157S T201Q",2
"lib2","SARS-CoV-2","TGCCAACCCGCAGAGT",5,18.78,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F70V V180S P197F",3
"lib2","SARS-CoV-2","TGCCAACTCCAACCTG",3,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67N A89L F160L",3
"lib2","SARS-CoV-2","TGCCAAGCGCCCCTTT",7,64.63,10.64,-0.2,0.07,2.86,1.07,0,">1 nonsynonymous","V173I E186Y",2
"lib2","SARS-CoV-2","TGCCAAGGAATAAAAG",7,241.37,8.53,-2.31,0.11,3,1.08,0,"1 nonsynonymous","F126G",1
"lib2","SARS-CoV-2","TGCCAAGGGTTAACTT",3,28.02,8.54,-2.3,0.23,1.5,1.04,0.02,">1 nonsynonymous","G9Q I72V G86S I142T",4
"lib2","SARS-CoV-2","TGCCAAGTAACCTTGC",3,18.08,6,-4.84,1.87,3,1.1,0.01,">1 nonsynonymous","N40V R124P",2
"lib2","SARS-CoV-2","TGCCAAGTGGTAATGG",5,48.82,10.9,0.06,0.06,2.95,1.07,0,">1 nonsynonymous","N1P V37I Y39V N130S",4
"lib2","SARS-CoV-2","TGCCAAGTTAAAAATG",3,38.55,6.1,-4.74,0.61,1.5,1.19,0.01,">1 nonsynonymous","G86L N110H Q144L",3
"lib2","SARS-CoV-2","TGCCAATAATAAAGAG",2,5.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11M Y35V W106R",3
"lib2","SARS-CoV-2","TGCCAATACCCCACTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TGCCAATCAAAAAAAA",1,10.68,7.82,-3.02,0.31,2.52,1.13,0.02,">1 nonsynonymous","C31T C61H D98G T170A",4
"lib2","SARS-CoV-2","TGCCAATGAGGGACTT",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91K G101D",2
"lib2","SARS-CoV-2","TGCCAATGCCGTTTCA",2,30.77,8.01,-2.82,0.23,1.5,1.11,0.02,">1 nonsynonymous","F8R K26L",2
"lib2","SARS-CoV-2","TGCCAATTGCCTAAAT",4,2.61,NA,NA,NA,NA,NA,NA,"stop","Y35V N58F A105G K114I T140* P149T G166L",7
"lib2","SARS-CoV-2","TGCCACAACAATGGAC",3,43.24,8.42,-2.42,0.11,2.58,1.02,0,"1 nonsynonymous","G146I",1
"lib2","SARS-CoV-2","TGCCACAAGATAAAAG",8,60.47,10.76,-0.08,0.05,2.95,1.06,0,"1 nonsynonymous","S36L",1
"lib2","SARS-CoV-2","TGCCACAATCCCAGAA",15,76.72,9.36,-1.47,0.08,1.85,1.1,0,">1 nonsynonymous","G51I A145G",2
"lib2","SARS-CoV-2","TGCCACACGGGTTCAG",1,10.67,10.69,-0.15,0.11,2.86,1.12,0,"1 nonsynonymous","T140L",1
"lib2","SARS-CoV-2","TGCCACAGGAACAACG",5,23.93,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","A89L P149W F156L",3
"lib2","SARS-CoV-2","TGCCACCGGTGAGGTT",1,1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y Y119N R124E L162S",4
"lib2","SARS-CoV-2","TGCCACCGTCTTTTTT",3,56.67,10.81,-0.02,0.05,2.87,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCACGAGAATGTTG",3,57.45,10.84,0,0.07,2.9,1.13,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","TGCCACGTGAACCAAT",5,69.46,10.8,-0.04,0.04,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCACGTTTGCGCAC",8,158.65,9.42,-1.42,0.07,2.5,1.1,0,">1 nonsynonymous","T63R K114S Y121S",3
"lib2","SARS-CoV-2","TGCCACTAAAACAACG",1,8.68,10.58,-0.25,0.07,2.96,1,0,">1 nonsynonymous","N1S L57M P149S",3
"lib2","SARS-CoV-2","TGCCACTATGGCCTGA",3,22.91,10.38,-0.46,0.11,2.49,1,0.01,">1 nonsynonymous","T3V N24I E141D",3
"lib2","SARS-CoV-2","TGCCACTCTATGATAT",7,66.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S43T T100P P133C G146T P161S",5
"lib2","SARS-CoV-2","TGCCACTTCGCCCTTT",4,75.86,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","I88K S129V",2
"lib2","SARS-CoV-2","TGCCAGAAATCAACCA",6,75.1,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","A18T D112A Y121T R124H K198L",5
"lib2","SARS-CoV-2","TGCCAGACACTTATAC",3,39.23,9.63,-1.2,0.08,1.94,1.07,0,"1 nonsynonymous","V77K",1
"lib2","SARS-CoV-2","TGCCAGACAGATGTAG",2,11.47,8.05,-2.78,0.38,1.52,1,0.03,">1 nonsynonymous","V52A A89L A145P",3
"lib2","SARS-CoV-2","TGCCAGAGATTTGGTG",9,36.12,6.9,-3.93,0.38,1.5,1.15,0.03,">1 nonsynonymous","K48S A89P W106A",3
"lib2","SARS-CoV-2","TGCCAGAGGTAATAGC",5,40.42,8.1,-2.74,0.17,1.5,1.01,0.01,">1 nonsynonymous","S41R K128R G155L P169Y V173K A192F",6
"lib2","SARS-CoV-2","TGCCAGATGATTATCT",2,10.33,7.27,-3.57,0.38,1.5,1.15,0.03,">1 nonsynonymous","C61Y I88C",2
"lib2","SARS-CoV-2","TGCCAGATGCTAAGAC",3,0.6,NA,NA,NA,NA,NA,NA,"stop","S69*",1
"lib2","SARS-CoV-2","TGCCAGATTCACACTA",2,9.18,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","Y35R S113I",2
"lib2","SARS-CoV-2","TGCCAGCACCTACACA",10,76.02,9.14,-1.69,0.08,1.77,1.09,0,">1 nonsynonymous","Y35T Y91V",2
"lib2","SARS-CoV-2","TGCCAGCCCCGAAACG",3,28.01,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","C61E F134M F160T F167T",4
"lib2","SARS-CoV-2","TGCCAGCCCCTTAACT",2,1.59,NA,NA,NA,NA,NA,NA,"stop","A81* S113Y",2
"lib2","SARS-CoV-2","TGCCAGCTCACTATAG",1,18.99,8.26,-2.57,0.21,2.83,1.06,0.02,">1 nonsynonymous","A18S Y143T N151A",3
"lib2","SARS-CoV-2","TGCCAGGACACAAATG",1,28.46,10.31,-0.53,0.07,2.86,1.13,0,">1 nonsynonymous","T15A T55A",2
"lib2","SARS-CoV-2","TGCCAGGGTTTATTAC",2,25.53,7.22,-3.62,0.14,1.5,1,0.01,">1 nonsynonymous","K94R N107Y",2
"lib2","SARS-CoV-2","TGCCAGTATTCACCCG",2,6.09,11.01,0.17,0.27,2.99,1,0.01,">1 nonsynonymous","N58V S129H",2
"lib2","SARS-CoV-2","TGCCATAAAAATGATG",17,156,10.11,-0.72,0.05,2.63,1.08,0,">1 nonsynonymous","D90G N171H",2
"lib2","SARS-CoV-2","TGCCATAAACTATAAG",2,10.58,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","K26M A81P F99S Y178F F185I",5
"lib2","SARS-CoV-2","TGCCATAAGCAGCAAA",2,46.59,8.68,-2.16,0.24,1.5,1.06,0.02,">1 nonsynonymous","G9L L38H L60A W106Y",4
"lib2","SARS-CoV-2","TGCCATAAGTCAAGCC",3,33.23,9.78,-1.06,0.04,3,1.03,0,">1 nonsynonymous","T55G F156N",2
"lib2","SARS-CoV-2","TGCCATACACGCCCGC",5,55.18,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A33R R127P",2
"lib2","SARS-CoV-2","TGCCATATAAAACAGA",2,41.92,9.17,-1.67,0.05,2.99,1.09,0,">1 nonsynonymous","Y119M A190K",2
"lib2","SARS-CoV-2","TGCCATATAAAATGAC",8,83.2,10.67,-0.17,0.05,2.89,1.09,0,">1 nonsynonymous","P54V G152S E186N",3
"lib2","SARS-CoV-2","TGCCATATATCATTCA",9,142.93,10.04,-0.8,0.04,3,1.02,0,">1 nonsynonymous","E141Q F156S V173F",3
"lib2","SARS-CoV-2","TGCCATATATCCCCAT",4,85.76,10.44,-0.4,0.03,3,1,0,">1 nonsynonymous","K26V G174W T201Y",3
"lib2","SARS-CoV-2","TGCCATCAAAAAGGAA",24,183.26,6.25,-4.58,0.34,1.5,1.15,0.01,">1 nonsynonymous","F134T Y143S",2
"lib2","SARS-CoV-2","TGCCATCAACTTAAAA",3,27.25,6,-4.84,2,3,1.13,0,">1 nonsynonymous","W106R K132D Q144L",3
"lib2","SARS-CoV-2","TGCCATCAATTCATTG",11,131.84,10.8,-0.04,0.03,2.95,1.06,0,"1 nonsynonymous","T55W",1
"lib2","SARS-CoV-2","TGCCATCATGCATCAC",5,19.38,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D34S R127D",2
"lib2","SARS-CoV-2","TGCCATCCACCGCACA",1,16.46,10.13,-0.71,0.21,2.04,1.01,0.03,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","TGCCATCCGCATTGAC",6,21.87,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S29H V115R L183P",3
"lib2","SARS-CoV-2","TGCCATCGTCAACTAT",3,38.88,9.48,-1.36,0.14,1.64,1.06,0.01,">1 nonsynonymous","F44P K56F A81G",3
"lib2","SARS-CoV-2","TGCCATCTGTCACCCA",7,35.68,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","V37S I80V G86T I142Y P149I",5
"lib2","SARS-CoV-2","TGCCATCTTCCATCTT",2,34.41,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N4M T46V D137K G155T Q163Y",5
"lib2","SARS-CoV-2","TGCCATGGAAGTCATG",4,66.98,9.64,-1.19,0.06,2.78,1.07,0,">1 nonsynonymous","K26C F62L P169Q",3
"lib2","SARS-CoV-2","TGCCATGGGGACAGGT",5,45.36,10.84,0.01,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCATGTGGGTACTA",6,1.49,NA,NA,NA,NA,NA,NA,"stop","F44* Y159D",2
"lib2","SARS-CoV-2","TGCCATTAATCCTATT",1,1.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S P82A K94C G101R Q144L L183P",6
"lib2","SARS-CoV-2","TGCCATTATAACGCTA",1,22.93,8.71,-2.13,0.13,2.96,1.15,0.01,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","TGCCATTATACCAAAT",7,73.32,9.96,-0.87,0.06,2.9,1.09,0,"1 nonsynonymous","R73S",1
"lib2","SARS-CoV-2","TGCCATTTATTTAATA",4,21.02,7.74,-3.09,0.32,1.5,1.08,0.04,">1 nonsynonymous","T63S F70L T100V N109L",4
"lib2","SARS-CoV-2","TGCCATTTCAATGCCT",4,28.38,10.29,-0.55,0.06,2.83,1.01,0,"1 nonsynonymous","A14H",1
"lib2","SARS-CoV-2","TGCCCAAACTTGTCGG",2,20.92,6.81,-4.03,0.53,1.5,1.02,0.06,">1 nonsynonymous","F126L C158L",2
"lib2","SARS-CoV-2","TGCCCAAATCAACATT",6,145.78,10.68,-0.16,0.03,2.91,1.04,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","TGCCCAACACGTCATA",3,42.2,9.57,-1.27,0.06,2.94,1.03,0,">1 nonsynonymous","L5Y N24S D90S K114G",4
"lib2","SARS-CoV-2","TGCCCAACGAGATCCA",7,2205.28,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N13I F62R L111T Y119D C158Q Y175V",6
"lib2","SARS-CoV-2","TGCCCAAGGGACGACT",3,17.43,10.56,-0.27,0.06,2.95,1.01,0,"1 nonsynonymous","G83E",1
"lib2","SARS-CoV-2","TGCCCAATACCAAATA",9,193.96,9.42,-1.41,0.07,2.6,1.08,0,">1 nonsynonymous","C61L Y123H S129Q P169I",4
"lib2","SARS-CoV-2","TGCCCAATCACCACCT",7,88.14,9.34,-1.49,0.09,2.27,1.07,0,">1 nonsynonymous","C49F A145M",2
"lib2","SARS-CoV-2","TGCCCAATCCTCAGAG",16,7.97,NA,NA,NA,NA,NA,NA,"stop","C61W K132*",2
"lib2","SARS-CoV-2","TGCCCAATGCAAAATA",4,8.72,NA,NA,NA,NA,NA,NA,"stop","T63* P149C",2
"lib2","SARS-CoV-2","TGCCCACCCAGTAACT",7,99.06,10.69,-0.15,0.04,2.97,1.05,0,">1 nonsynonymous","N1Y K132R",2
"lib2","SARS-CoV-2","TGCCCACCGCATATAC",15,6.33,NA,NA,NA,NA,NA,NA,"stop","F44S L122*",2
"lib2","SARS-CoV-2","TGCCCACGAAATGTTT",2,8.09,9.26,-1.58,0.3,1.81,1,0.04,">1 nonsynonymous","A18I K48V",2
"lib2","SARS-CoV-2","TGCCCACTAAAGATAC",4,46.67,9.46,-1.37,0.1,2.04,1.07,0,">1 nonsynonymous","N107T A190L",2
"lib2","SARS-CoV-2","TGCCCACTTACCTGTT",3,12.13,10.15,-0.69,0.29,2.33,1.03,0.02,">1 nonsynonymous","N1C R16I R27P",3
"lib2","SARS-CoV-2","TGCCCACTTGTTAGGT",2,57.61,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I28R D59A D137F L162S",4
"lib2","SARS-CoV-2","TGCCCAGAAAAACCGC",2,18.85,10.7,-0.13,0.05,2.88,1.13,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","TGCCCAGACAGAGAAG",1,25.85,10.84,0.01,0.11,2.84,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCCAGATTAGACTT",12,205.56,9.32,-1.51,0.06,2.29,1.08,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","TGCCCAGGTCTTAATA",4,27.17,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G83D L95E F99H P133W T201C",5
"lib2","SARS-CoV-2","TGCCCATAAAAGTGAC",2,56.58,10.68,-0.16,0.04,2.91,1.08,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","TGCCCATAAGAGAAGC",5,0.83,NA,NA,NA,NA,NA,NA,"stop","V37E G51M G152I Q176*",4
"lib2","SARS-CoV-2","TGCCCATACAACACTA",4,30.09,10.51,-0.33,0.07,2.92,1.05,0,">1 nonsynonymous","G9R G83R T148M",3
"lib2","SARS-CoV-2","TGCCCATCATAACCCT",5,9.72,8.58,-2.25,0.4,1.67,1.26,0.04,">1 nonsynonymous","A14E A105M P149Q",3
"lib2","SARS-CoV-2","TGCCCATCGACACCAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S19Q",1
"lib2","SARS-CoV-2","TGCCCATGATGCTCAA",2,2.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T F44M I142M",3
"lib2","SARS-CoV-2","TGCCCATGCCCACCCA",1,18.65,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","A18M A89L G101P E141K S164E P169L",6
"lib2","SARS-CoV-2","TGCCCCAATATATAGA",1,46.4,10.87,0.04,0.18,2.47,1.5,0.01,"1 nonsynonymous","L122A",1
"lib2","SARS-CoV-2","TGCCCCAATTCGACAA",8,1.48,NA,NA,NA,NA,NA,NA,"stop","K26* N64L D90L K114V Y123V",5
"lib2","SARS-CoV-2","TGCCCCAGCACTCGAC",7,43.18,10.08,-0.76,0.1,2.27,1,0,">1 nonsynonymous","N58I N110Y E141P S200M",4
"lib2","SARS-CoV-2","TGCCCCATTAATGGTG",7,47.97,10.78,-0.06,0.04,2.9,1.11,0,">1 nonsynonymous","A33C C61Q",2
"lib2","SARS-CoV-2","TGCCCCCAAGCTACAG",6,130.49,6.11,-4.73,0.43,1.5,1.12,0.01,">1 nonsynonymous","C61Q L162V Q176C",3
"lib2","SARS-CoV-2","TGCCCCCGCAGACTAG",5,112.4,10.23,-0.61,0.03,2.97,1.06,0,"1 nonsynonymous","K87Q",1
"lib2","SARS-CoV-2","TGCCCCCTACTCTATA",2,14.3,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S43V I88Y T100I Y121I",4
"lib2","SARS-CoV-2","TGCCCCCTGATTAGAC",1,17.84,10.24,-0.6,0.1,2.73,1.08,0.01,">1 nonsynonymous","A14S D98M",2
"lib2","SARS-CoV-2","TGCCCCCTTGGCAAAT",2,15.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10C W106R N151S G166F",4
"lib2","SARS-CoV-2","TGCCCCGGGGGACAAT",3,51.71,8.01,-2.82,0.12,1.86,1.06,0.01,">1 nonsynonymous","E10L D59T Y91N Y119G K198I",5
"lib2","SARS-CoV-2","TGCCCCTTGATGATCC",8,141.75,10.3,-0.54,0.03,2.86,1.07,0,"1 nonsynonymous","G174Y",1
"lib2","SARS-CoV-2","TGCCCGAAAAACTCCT",6,3.87,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175D",1
"lib2","SARS-CoV-2","TGCCCGAAAAGTAGAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","G51L S113* A190E",3
"lib2","SARS-CoV-2","TGCCCGAACTAGGCCA",4,24.7,10.96,0.12,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCCGAAGTGAGATT",4,123.78,6,-4.84,0.71,1.5,1.14,0.01,">1 nonsynonymous","N118L E141T Y165R",3
"lib2","SARS-CoV-2","TGCCCGAATACTTAAG",2,9.09,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","F62N D90S C102S S129R",4
"lib2","SARS-CoV-2","TGCCCGACAAACATGG",2,29.04,9.59,-1.24,0.07,2.86,1.13,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","TGCCCGACTACAACTT",4,18.23,10.46,-0.38,0.08,2.88,1.07,0,"1 nonsynonymous","Y35S",1
"lib2","SARS-CoV-2","TGCCCGGCATAAAAGT",4,61.38,9.36,-1.47,0.19,1.87,1.07,0.02,">1 nonsynonymous","N4Y V11N",2
"lib2","SARS-CoV-2","TGCCCGGCGCATCACC",3,29.41,8.71,-2.13,0.29,1.76,1.13,0.04,">1 nonsynonymous","G74T K198S",2
"lib2","SARS-CoV-2","TGCCCGGTAAATCATG",1,0,NA,NA,NA,NA,NA,NA,"stop","T3V I104M G146F Y175*",4
"lib2","SARS-CoV-2","TGCCCGTAAGGACCGA",2,37.69,10.19,-0.65,0.07,2.7,1.01,0,">1 nonsynonymous","L5Q Q79R",2
"lib2","SARS-CoV-2","TGCCCGTATCTATTCG",18,116.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6V D68F V173D",3
"lib2","SARS-CoV-2","TGCCCGTGAATACGGT",4,56.25,10.79,-0.04,0.07,2.79,1.15,0,">1 nonsynonymous","L5N S41T",2
"lib2","SARS-CoV-2","TGCCCGTTGATAACAT",3,14.7,8.65,-2.19,0.28,1.5,1.09,0.03,">1 nonsynonymous","S41D P82G N120S",3
"lib2","SARS-CoV-2","TGCCCTAACATCTACG",1,6.19,NA,NA,NA,NA,NA,NA,"stop","T3M A14L D68K A89*",4
"lib2","SARS-CoV-2","TGCCCTAACGAGCCTG",4,47.11,9.6,-1.24,0.04,2.87,1.01,0,">1 nonsynonymous","E141W T148V E154I",3
"lib2","SARS-CoV-2","TGCCCTACTACGCTTG",3,36.29,10.99,0.16,0.05,2.88,1.14,0,"1 nonsynonymous","K199C",1
"lib2","SARS-CoV-2","TGCCCTAGCAAGTCAT",7,0.68,NA,NA,NA,NA,NA,NA,"stop","S41M D75* F99Y E135C",4
"lib2","SARS-CoV-2","TGCCCTATAATGCAAT",6,51.84,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F44L Y121S C158M",3
"lib2","SARS-CoV-2","TGCCCTATCGTCTTAG",3,52.39,6.82,-4.01,0.25,1.5,1.12,0.01,">1 nonsynonymous","F17P F62D N118A",3
"lib2","SARS-CoV-2","TGCCCTCCATGGCGAC",3,36.87,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","N4H S147V F167C",3
"lib2","SARS-CoV-2","TGCCCTCCCTAAATTC",4,145,9.64,-1.2,0.09,2.26,1.05,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TGCCCTGCACAATGGT",2,0,NA,NA,NA,NA,NA,NA,"stop","R27M Y119*",2
"lib2","SARS-CoV-2","TGCCCTGTGTACAAAA",1,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A I88W F99P Q168A",4
"lib2","SARS-CoV-2","TGCCCTGTTATTCTAT",1,12.67,6.09,-4.75,0.86,1.5,1.2,0.03,">1 nonsynonymous","P161R N171H",2
"lib2","SARS-CoV-2","TGCCCTTCACCCTTCA",12,177.7,10.76,-0.08,0.04,2.95,1.07,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","TGCCCTTGATTATGAG",22,126.87,8.59,-2.25,0.19,1.5,1.04,0.02,">1 nonsynonymous","S41L Y50C",2
"lib2","SARS-CoV-2","TGCCCTTGCGGACATA",19,111.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108K C150S",2
"lib2","SARS-CoV-2","TGCCGAAAGCACGAGC",6,79.51,10.72,-0.11,0.03,2.95,1.04,0,">1 nonsynonymous","N1V T63Q",2
"lib2","SARS-CoV-2","TGCCGAAATGGTTTGT",11,57.17,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","S41V T46S P161N T170H",4
"lib2","SARS-CoV-2","TGCCGAACAAAAATAA",5,132.66,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","A14S G86F N151C",3
"lib2","SARS-CoV-2","TGCCGAAGCCATTGCG",5,131.15,10.43,-0.41,0.03,2.92,1.04,0,">1 nonsynonymous","I104A N151E",2
"lib2","SARS-CoV-2","TGCCGAATCCTTACAG",4,33.55,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","L5E K94V Y175T",3
"lib2","SARS-CoV-2","TGCCGACATCCTGAAA",1,21.68,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D112S E135L E141V G166K L183R",5
"lib2","SARS-CoV-2","TGCCGACATGATTCGA",2,14.01,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","K48S T85D D97Y V103Q V115H L162R",6
"lib2","SARS-CoV-2","TGCCGAGAACTGCCTT",5,34.05,10.82,-0.02,0.08,2.97,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCGAGTCCCCTGCC",8,160.21,10.47,-0.37,0.04,2.87,1.14,0,">1 nonsynonymous","T100V T170S",2
"lib2","SARS-CoV-2","TGCCGATACAATGAAA",3,39.02,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","I2L A14L R27K Y143P",4
"lib2","SARS-CoV-2","TGCCGATTACCAAGAA",5,6.34,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","TGCCGATTAGGCGCAC",4,25.26,6.16,-4.67,2,1.5,1.14,0.05,">1 nonsynonymous","I2K L95H L122S",3
"lib2","SARS-CoV-2","TGCCGCAATATTGGAT",3,40.62,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","V11G C61M G86F I142A",4
"lib2","SARS-CoV-2","TGCCGCCAAAACTTCC",5,96.75,10.36,-0.48,0.04,2.87,1.04,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","TGCCGCCACCGATCAA",8,30.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99T T170Y",2
"lib2","SARS-CoV-2","TGCCGCCATACGAACT",6,37.26,8.76,-2.08,0.17,1.56,1.23,0.01,">1 nonsynonymous","S36M A67F N107S",3
"lib2","SARS-CoV-2","TGCCGCCTATGACGAT",11,35.22,6,-4.84,2,1.5,1.35,0.07,">1 nonsynonymous","D34C F99E F160G",3
"lib2","SARS-CoV-2","TGCCGCGCCCACCCCC",2,7.34,9.68,-1.15,0.18,2.82,1.08,0.01,">1 nonsynonymous","F17I S43L L111Q",3
"lib2","SARS-CoV-2","TGCCGGAAAATGGTTA",3,22.28,7.69,-3.14,0.4,1.5,1,0.05,">1 nonsynonymous","C61L A89S S139F P149E",4
"lib2","SARS-CoV-2","TGCCGGAAACAAAAAA",1,31.29,10.97,0.13,0.09,2.92,1.07,0,"1 nonsynonymous","G9K",1
"lib2","SARS-CoV-2","TGCCGGACCAACTATT",6,1.5,NA,NA,NA,NA,NA,NA,"stop","N58S K87*",2
"lib2","SARS-CoV-2","TGCCGGATATATTTGA",13,198.31,10.08,-0.76,0.04,2.76,1.07,0,"1 nonsynonymous","A105M",1
"lib2","SARS-CoV-2","TGCCGGCCCTCAGGTA",5,2.55,NA,NA,NA,NA,NA,NA,"stop","N64T G86T Y121* F167P",4
"lib2","SARS-CoV-2","TGCCGGCGCTGTAAAG",2,15.85,10.69,-0.14,0.07,2.96,1.09,0,"1 nonsynonymous","N4K",1
"lib2","SARS-CoV-2","TGCCGGGATATAGATA",1,29.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","T63N Y93N T100K L111Y",4
"lib2","SARS-CoV-2","TGCCGGGCCATTGCAC",12,161.65,10.81,-0.03,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCGGGTGGCGACGA",2,155.25,8.24,-2.6,0.11,2.8,1.04,0,">1 nonsynonymous","T3R Y143A G166A L187K P197S",5
"lib2","SARS-CoV-2","TGCCGGTAAAACAAGT",11,103.78,10.51,-0.33,0.05,2.92,1.1,0,">1 nonsynonymous","V37D F44L",2
"lib2","SARS-CoV-2","TGCCGGTATGATGCTT",6,107.42,10.76,-0.07,0.04,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCGTAAACTTCCAC",5,29.32,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","C6I N40M T85W T170L",4
"lib2","SARS-CoV-2","TGCCGTAAAGAATTGG",8,354.09,9.6,-1.24,0.02,2.88,1.07,0,"1 nonsynonymous","I142N",1
"lib2","SARS-CoV-2","TGCCGTAACTTAATAC",5,127.5,10.61,-0.23,0.04,2.96,1.05,0,">1 nonsynonymous","Y39M G166N",2
"lib2","SARS-CoV-2","TGCCGTAATAGAGGTC",1,17.78,6.93,-3.91,0.4,1.5,1.09,0.03,">1 nonsynonymous","V37F I142D N157I",3
"lib2","SARS-CoV-2","TGCCGTACGTAAGCCA",2,0.29,NA,NA,NA,NA,NA,NA,"stop","C31* S41T P54F L60W D97E V103I",6
"lib2","SARS-CoV-2","TGCCGTATATTAGAGA",4,58.9,10.92,0.08,0.06,2.96,1.05,0,"1 nonsynonymous","I28L",1
"lib2","SARS-CoV-2","TGCCGTATTACGACGG",4,20.2,8.08,-2.76,0.39,1.5,1.04,0.05,">1 nonsynonymous","P177Q V182S T201Y",3
"lib2","SARS-CoV-2","TGCCGTGACATAAGGG",1,0.91,NA,NA,NA,NA,NA,NA,"stop","T3S T15R C49V N107P P149F C195*",6
"lib2","SARS-CoV-2","TGCCGTGCTACACCCA",2,92.73,9.69,-1.15,0.04,2.86,1.07,0,">1 nonsynonymous","S113G K128I",2
"lib2","SARS-CoV-2","TGCCGTTAACAGAGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","C61N T170* A190N",3
"lib2","SARS-CoV-2","TGCCGTTAACTATGAC",3,18.59,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T100P P133L T148F",3
"lib2","SARS-CoV-2","TGCCTAAAACCACAAG",7,16.08,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A22N D68K",2
"lib2","SARS-CoV-2","TGCCTAAATCGAAAAT",3,91.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y123V P169M P177F",3
"lib2","SARS-CoV-2","TGCCTAACGAGACCAT",4,24.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I88D D97S P161R",3
"lib2","SARS-CoV-2","TGCCTAACTGCTTGGT",4,96.95,10.11,-0.72,0.08,2.53,1.02,0,"1 nonsynonymous","C102V",1
"lib2","SARS-CoV-2","TGCCTAAGCCCCCTTC",15,53.65,6,-4.84,1.49,1.5,1.19,0.01,">1 nonsynonymous","A67S F99H",2
"lib2","SARS-CoV-2","TGCCTAAGTACCAAAT",7,220.63,10.4,-0.44,0.04,2.89,1.04,0,">1 nonsynonymous","G9S W106F",2
"lib2","SARS-CoV-2","TGCCTAATCAATGCTA",2,56.24,10.29,-0.55,0.04,2.83,1.08,0,"1 nonsynonymous","E186F",1
"lib2","SARS-CoV-2","TGCCTAATCCTAAGTA",1,111.37,10.63,-0.21,0.05,2.91,1.07,0,"1 nonsynonymous","Q144K",1
"lib2","SARS-CoV-2","TGCCTACATTTCTTAT",2,13.94,9.89,-0.94,0.12,2.2,1.02,0.01,">1 nonsynonymous","A42Q K48D K94Q K114W",4
"lib2","SARS-CoV-2","TGCCTACCACAAAACA",2,6.06,6,-4.84,2,3,1.31,0.02,">1 nonsynonymous","F44C I72Q K87Y P96L N118F S139R P161L T201C",8
"lib2","SARS-CoV-2","TGCCTACCCTAATGTT",1,24.34,8.78,-2.06,0.12,2.38,1.21,0.01,">1 nonsynonymous","L5D G74S Y119R",3
"lib2","SARS-CoV-2","TGCCTACCGCACCCGA",12,69.57,8.69,-2.14,0.07,2.99,1.06,0,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","TGCCTACTTAACAGAC",2,52.76,10.5,-0.34,0.04,2.97,1.02,0,">1 nonsynonymous","R16H D90T F160A",3
"lib2","SARS-CoV-2","TGCCTACTTCACAAAT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TGCCTAGACCATTACA",11,49.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46I F167L V180F",3
"lib2","SARS-CoV-2","TGCCTAGAGTTGAACC",5,18.88,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","K87T Y93D Y119N",3
"lib2","SARS-CoV-2","TGCCTAGCTCACCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16F G174E Y178C",3
"lib2","SARS-CoV-2","TGCCTAGTGTCCTAAA",1,32.14,10.33,-0.5,0.18,2.58,1.22,0.01,"1 nonsynonymous","I28M",1
"lib2","SARS-CoV-2","TGCCTATAACAACGGA",4,1.07,NA,NA,NA,NA,NA,NA,"stop","F47N V173*",2
"lib2","SARS-CoV-2","TGCCTATAATATCATG",3,7.51,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","F12W G146L",2
"lib2","SARS-CoV-2","TGCCTATATTAAGATC",2,36.54,10.4,-0.43,0.06,2.97,1.05,0,">1 nonsynonymous","N4I T140D",2
"lib2","SARS-CoV-2","TGCCTATCCTACCCAT",21,278.54,10.85,0.02,0.06,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCTATTTATACCTA",2,17.4,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","G86N I104G N130S F160V",4
"lib2","SARS-CoV-2","TGCCTCAGGTGAACTT",1,0.21,NA,NA,NA,NA,NA,NA,"stop","K56L I88R N118V K128*",4
"lib2","SARS-CoV-2","TGCCTCCAGGCTTCAG",7,2.3,NA,NA,NA,NA,NA,NA,"stop","L5R S45I V180* T201L",4
"lib2","SARS-CoV-2","TGCCTCCGAAAAATGC",1,27.09,10.77,-0.06,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCCTCCTAAGTGTGG",4,98.29,10.22,-0.62,0.06,2.66,1.01,0,">1 nonsynonymous","F47M N58F",2
"lib2","SARS-CoV-2","TGCCTCCTTGTGGTAC",8,215.14,10.56,-0.28,0.05,2.93,1.04,0,">1 nonsynonymous","N1S S184M",2
"lib2","SARS-CoV-2","TGCCTCGTTCGCACCG",1,16.33,10.07,-0.77,0.21,1.91,1.15,0.01,">1 nonsynonymous","T3M K56I A89S K114L P149A",5
"lib2","SARS-CoV-2","TGCCTCTAAAAGGGGC",1,12.93,9.6,-1.23,0.24,1.98,1.18,0.02,">1 nonsynonymous","A14T D59S T85I S139H",4
"lib2","SARS-CoV-2","TGCCTCTAAACGCATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36N C49V E141D",3
"lib2","SARS-CoV-2","TGCCTCTATTCAAGAA",8,79.24,6.54,-4.29,0.32,1.5,1.15,0.01,">1 nonsynonymous","D97S L162S",2
"lib2","SARS-CoV-2","TGCCTGAGTAAAAAGC",1,8.3,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","Y35R G101C S184C",3
"lib2","SARS-CoV-2","TGCCTGATAAGTCTAA",3,32.08,10.18,-0.65,0.07,2.87,1,0,"1 nonsynonymous","C6M",1
"lib2","SARS-CoV-2","TGCCTGATACTGAAAC",3,48.5,8.36,-2.48,0.15,2.07,1.08,0.01,">1 nonsynonymous","C61S P96K Y119M F134Y",4
"lib2","SARS-CoV-2","TGCCTGTTATACGTTG",4,24.82,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F17L Q84N N107G L187N",4
"lib2","SARS-CoV-2","TGCCTTAATACTACAA",6,163.35,10.12,-0.72,0.03,2.83,1.06,0,">1 nonsynonymous","T46D L60R V173E",3
"lib2","SARS-CoV-2","TGCCTTAGCACGATAT",3,23.26,10.1,-0.73,0.04,3,1,0,">1 nonsynonymous","L60V K87G T201L",3
"lib2","SARS-CoV-2","TGCCTTATTGTATATT",3,21.19,7.78,-3.06,0.32,1.5,1.12,0.02,"1 nonsynonymous","P82N",1
"lib2","SARS-CoV-2","TGCCTTCCTCTCCATT",1,43.96,10.88,0.04,0.05,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCCTTCGTCCGCGGA",6,85.45,10.38,-0.46,0.05,2.77,1,0,">1 nonsynonymous","N4R N13R S41L P191T",4
"lib2","SARS-CoV-2","TGCCTTCTGGTCCCAC",5,0.19,NA,NA,NA,NA,NA,NA,"stop","F8Y D90R R136*",3
"lib2","SARS-CoV-2","TGCCTTGAGATAAACA",26,219.41,6.53,-4.31,0.39,1.5,1.17,0.02,">1 nonsynonymous","N30Y T55D D97N L162Y Q168M",5
"lib2","SARS-CoV-2","TGCCTTTAAAAGTCAA",3,145.54,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","A33L P82W N120T P177F",4
"lib2","SARS-CoV-2","TGCCTTTACATACAGC",4,22.02,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y93T A105K S129C",3
"lib2","SARS-CoV-2","TGCCTTTAGCCTAAAA",1,5.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R D97G",2
"lib2","SARS-CoV-2","TGCCTTTATCACTCTG",2,27.63,9.73,-1.11,0.1,2.32,1,0.01,">1 nonsynonymous","R16L S29V T85P",3
"lib2","SARS-CoV-2","TGCCTTTCACATATAT",3,72.35,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N92K L122R",2
"lib2","SARS-CoV-2","TGCCTTTGAACCATAA",2,20.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47L S129C Y143L",3
"lib2","SARS-CoV-2","TGCCTTTTTTCCTCCT",1,9.76,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15L V32G I104V C158R",4
"lib2","SARS-CoV-2","TGCGAAAATTGTAGTA",2,23.2,10.67,-0.16,0.06,2.96,1.05,0,">1 nonsynonymous","K87Y K114R",2
"lib2","SARS-CoV-2","TGCGAAATCCACGCCA",1,1.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89H R136T",2
"lib2","SARS-CoV-2","TGCGAAATGAAAAGGA",13,236.47,10.87,0.03,0.06,2.89,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGAACACCACTCAA",2,34.03,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","I2Q R27G S36Y C61I S69W T148Y F156P",7
"lib2","SARS-CoV-2","TGCGAACAGGTTAAGA",6,27.87,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","A22N G51W Y119W N151L N157T Q176S",6
"lib2","SARS-CoV-2","TGCGAACCCACGGCGC",4,29.9,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","TGCGAACTAATACTAG",17,242.33,10.72,-0.12,0.02,2.92,1.09,0,">1 nonsynonymous","G9E Y121F I142V P197T",4
"lib2","SARS-CoV-2","TGCGAACTAGTAATTC",6,99.67,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8E Y91V Y119M R127S Y178I",5
"lib2","SARS-CoV-2","TGCGAACTTGTAACAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A89T Y119*",2
"lib2","SARS-CoV-2","TGCGAAGGTGAGGGGA",2,45.79,9.62,-1.21,0.09,2.1,1.04,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","TGCGAAGTCCTGTTCG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","Q168*",1
"lib2","SARS-CoV-2","TGCGAATAATCCCGTG",1,0.08,NA,NA,NA,NA,NA,NA,"stop","F17L D90C L131* T201L",4
"lib2","SARS-CoV-2","TGCGAATAGCCGTGAC",13,104.34,8.36,-2.48,0.15,2.86,1.05,0.01,">1 nonsynonymous","D59M Y159V",2
"lib2","SARS-CoV-2","TGCGAATCTTAAGTAA",5,82.61,10.54,-0.29,0.05,2.9,1.02,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","TGCGAATTACATATTC",10,272.55,10.26,-0.57,0.05,2.69,1.03,0,">1 nonsynonymous","N1I R136H",2
"lib2","SARS-CoV-2","TGCGAATTCCATAAGC",5,0.7,NA,NA,NA,NA,NA,NA,"stop","E10M S36F G74S D98* N171H",5
"lib2","SARS-CoV-2","TGCGAATTGGTACTAG",10,77.11,10.87,0.03,0.06,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGACAGATATATAT",3,10.1,9.52,-1.32,0.19,2.01,1,0.01,">1 nonsynonymous","G9S Q84W Q144P",3
"lib2","SARS-CoV-2","TGCGACATTGATATAA",11,3.98,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","TGCGACCTAATAAAAT",3,29.36,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14C Q79P D97M",3
"lib2","SARS-CoV-2","TGCGACGATAACATAA",4,46.88,9.8,-1.04,0.07,2.27,1.09,0,">1 nonsynonymous","F44R P54V L60R T85S",4
"lib2","SARS-CoV-2","TGCGACGCCGACGTTA",1,28.88,9.62,-1.22,0.15,1.82,1.07,0.01,">1 nonsynonymous","G9L T63G Q84W",3
"lib2","SARS-CoV-2","TGCGACTAAAGGGTAC",5,1.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C K94E L95R I104R S139T S164P V173I",7
"lib2","SARS-CoV-2","TGCGACTATGGTCAAC",4,93.81,10.9,0.07,0.06,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCGACTCTCGGGAAA",2,18.73,6.68,-4.16,0.6,1.5,1.17,0.03,">1 nonsynonymous","R16A P96K N107K T140R",4
"lib2","SARS-CoV-2","TGCGACTGAATCTAAA",3,43.58,6,-4.84,2,3,1.14,0,">1 nonsynonymous","W23Q F47A C150G",3
"lib2","SARS-CoV-2","TGCGACTTAACTAGAA",4,0,NA,NA,NA,NA,NA,NA,"stop","T3A Y39* G152F F185V",4
"lib2","SARS-CoV-2","TGCGACTTAATCACAA",9,107.72,6.39,-4.44,0.28,1.55,1.14,0.01,">1 nonsynonymous","N4L K26S S41I F47L K114G T140F",6
"lib2","SARS-CoV-2","TGCGACTTTTTCTGCG",4,51.82,10.11,-0.72,0.1,2.64,1,0.01,">1 nonsynonymous","D34R T100Y",2
"lib2","SARS-CoV-2","TGCGAGAACCAAATTA",4,36.92,10.99,0.16,0.07,2.98,1,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","TGCGAGAAGTGGAGAT",2,87.66,9.37,-1.47,0.08,2.67,1.12,0,">1 nonsynonymous","N1M Y119V",2
"lib2","SARS-CoV-2","TGCGAGACACATAATT",1,33.17,10.89,0.05,0.05,2.91,1.09,0,"1 nonsynonymous","D97L",1
"lib2","SARS-CoV-2","TGCGAGAGCTGCCCAC",12,203.04,10.82,-0.02,0.04,2.94,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCGAGATGAAGAAAA",12,27.94,6.74,-4.1,0.46,1.5,1.32,0.03,">1 nonsynonymous","A14L W106R T170Y A192Y",4
"lib2","SARS-CoV-2","TGCGAGATGTTTATCA",4,72.27,8.56,-2.28,0.11,2.74,1.03,0,">1 nonsynonymous","Q84L Y119L",2
"lib2","SARS-CoV-2","TGCGAGATTAATAACC",6,73.17,9.21,-1.62,0.15,1.75,1.04,0.01,">1 nonsynonymous","F12L I88L N151K",3
"lib2","SARS-CoV-2","TGCGAGATTGTACTAT",3,40.18,8.86,-1.98,0.27,1.5,1.06,0.04,">1 nonsynonymous","I2A K48L L162R",3
"lib2","SARS-CoV-2","TGCGAGCGATAGTTTA",5,41.37,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","N4K V65G T140P F167R",4
"lib2","SARS-CoV-2","TGCGATAACTATAGGA",13,59.72,6.09,-4.75,0.69,1.5,1.18,0.01,">1 nonsynonymous","F17V P96E",2
"lib2","SARS-CoV-2","TGCGATAGAACCTCAA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","G116M Y123*",2
"lib2","SARS-CoV-2","TGCGATAGGTGGTCAT",5,79.07,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N1S Y35I T55Y R124E P133C V180L",6
"lib2","SARS-CoV-2","TGCGATATCTCTGTCA",6,0.77,NA,NA,NA,NA,NA,NA,"stop","A22Q S45R D98* L122G",4
"lib2","SARS-CoV-2","TGCGATATCTGATGCC",3,10.59,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A42R F99R K132N T201R",4
"lib2","SARS-CoV-2","TGCGATCCCCTAGTTA",1,31.57,8.45,-2.39,0.15,2.05,1.07,0.01,">1 nonsynonymous","Q84K F167L",2
"lib2","SARS-CoV-2","TGCGATGAAAACATAG",5,127.62,10.84,0,0.03,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCGATGCTTCGTTGC",2,24.45,10.76,-0.08,0.08,2.76,1.28,0,">1 nonsynonymous","V37T T148H",2
"lib2","SARS-CoV-2","TGCGATTAGCGATACA",8,48.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5G S41P N64K G155D C158W",5
"lib2","SARS-CoV-2","TGCGATTCAAATAATC",3,78.33,10.82,-0.02,0.04,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGATTGATACACTC",1,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L D137E V182W",3
"lib2","SARS-CoV-2","TGCGATTTGTAACCCT",6,55.33,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C158I F167I Y178R",3
"lib2","SARS-CoV-2","TGCGCAAACCACTGTA",1,45.57,10.88,0.04,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGCAACCACTAAGG",1,0.02,NA,NA,NA,NA,NA,NA,"stop","S43Y F160* K198*",3
"lib2","SARS-CoV-2","TGCGCAACCTCTTAAT",4,23.13,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","C31V P96K R136F F160A",4
"lib2","SARS-CoV-2","TGCGCAAGAAAATTAA",3,46.9,10.85,0.01,0.06,2.98,1.03,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","TGCGCAAGCACAAACG",7,3.61,NA,NA,NA,NA,NA,NA,"stop","K56Q V103Q L122*",3
"lib2","SARS-CoV-2","TGCGCAAGGTAAAAAA",6,81.57,9.01,-1.83,0.09,1.77,1.07,0,">1 nonsynonymous","G116R V173N V180L",3
"lib2","SARS-CoV-2","TGCGCAAGTTCAAACA",1,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14K T63N",2
"lib2","SARS-CoV-2","TGCGCAATACAAGGTC",2,48.01,6.14,-4.7,0.59,1.5,1.1,0.01,">1 nonsynonymous","Y119T N157K",2
"lib2","SARS-CoV-2","TGCGCACGGGTTGATC",1,0.7,NA,NA,NA,NA,NA,NA,"stop","F12R G51* V173K",3
"lib2","SARS-CoV-2","TGCGCAGAAACTATTC",15,2.22,NA,NA,NA,NA,NA,NA,"stop","I88G D98E L188*",3
"lib2","SARS-CoV-2","TGCGCAGCCAGAAAAA",3,53.34,10.88,0.04,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGCAGCGAAAAACA",5,42.64,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","L5G C49T G166R",3
"lib2","SARS-CoV-2","TGCGCAGGACAGGCTA",6,2.29,NA,NA,NA,NA,NA,NA,"stop","D97A N107Y K128Y F156Q V180*",5
"lib2","SARS-CoV-2","TGCGCAGGGCAATAGT",3,34.18,9.25,-1.58,0.07,2.84,1.13,0,">1 nonsynonymous","T3G T55D N120T",3
"lib2","SARS-CoV-2","TGCGCAGTGAATCGAT",3,80.28,10.58,-0.26,0.03,2.93,1.04,0,">1 nonsynonymous","N64T S129Y F134H",3
"lib2","SARS-CoV-2","TGCGCATAGTTTATTG",2,38.21,10.78,-0.06,0.05,3,1.04,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","TGCGCATCTAACCGGA",12,213.87,9.8,-1.03,0.04,2.75,1.05,0,">1 nonsynonymous","C6V Y123S S200I",3
"lib2","SARS-CoV-2","TGCGCATGGTTTATCG",7,91.93,6,-4.84,1.84,1.5,1.11,0.02,">1 nonsynonymous","R73V T85K R127S",3
"lib2","SARS-CoV-2","TGCGCATTCAAAATAA",5,5.84,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","C6T Y35G C49F G146S",4
"lib2","SARS-CoV-2","TGCGCCCGTCATACTA",4,7.07,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12L K94V L188P",3
"lib2","SARS-CoV-2","TGCGCCGAGATAGAAC",3,85.76,8.46,-2.37,0.15,1.5,1.07,0.01,">1 nonsynonymous","I88T S147H G174T",3
"lib2","SARS-CoV-2","TGCGCCGCTAAGTACC",1,12.69,9.75,-1.09,0.11,2.11,1.03,0.01,">1 nonsynonymous","Y66L W106Y S164N",3
"lib2","SARS-CoV-2","TGCGCCGTCATGATTT",1,0.18,NA,NA,NA,NA,NA,NA,"stop","F99C A105* K198L",3
"lib2","SARS-CoV-2","TGCGCCTCTGTAGCCT",2,69.03,8.8,-2.04,0.06,2.9,1.06,0,">1 nonsynonymous","T15G K114R V153M G166T P197A",5
"lib2","SARS-CoV-2","TGCGCGAGGGACCGTT",2,23.41,6.49,-4.34,0.77,1.5,1.16,0.04,">1 nonsynonymous","I2F F12H V20S W106F",4
"lib2","SARS-CoV-2","TGCGCGATCCAAACCA",9,220.41,8.77,-2.07,0.08,2.4,1.08,0,">1 nonsynonymous","S108H P197T",2
"lib2","SARS-CoV-2","TGCGCGATCTTGGTAC",9,0.38,NA,NA,NA,NA,NA,NA,"stop","L60* D98T S139R",3
"lib2","SARS-CoV-2","TGCGCGCACAGCCTAT",2,27.83,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N64S G83P N107R S139I C158E",5
"lib2","SARS-CoV-2","TGCGCGCATACGCGTT",6,51.53,9.44,-1.39,0.07,2.32,1.05,0,">1 nonsynonymous","N58I G116F E141T",3
"lib2","SARS-CoV-2","TGCGCGCGGTATCTCC",2,13.7,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","N24F L95F G174I",3
"lib2","SARS-CoV-2","TGCGCGGCGAGTTCCT",2,9.85,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T15K D68E",2
"lib2","SARS-CoV-2","TGCGCTACATAAAGAA",6,119.35,10.65,-0.19,0.03,2.92,1.07,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","TGCGCTATCTCCCTAG",8,81.44,6,-4.84,1.85,1.5,1.16,0.01,">1 nonsynonymous","W106R R124V",2
"lib2","SARS-CoV-2","TGCGCTCCAAATGATA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","P7E S41V F47* A67D G117E",5
"lib2","SARS-CoV-2","TGCGCTCGCTTTAAAA",2,12.96,10.21,-0.63,0.15,2.18,1.08,0.01,">1 nonsynonymous","E10W F44L",2
"lib2","SARS-CoV-2","TGCGCTCTCATTAAGA",1,0.56,NA,NA,NA,NA,NA,NA,"stop","G9D V32A S41* G83R",4
"lib2","SARS-CoV-2","TGCGCTGCAATCCTAA",2,35.76,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","C158D",1
"lib2","SARS-CoV-2","TGCGCTGCCAGCACTA",8,26.99,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N13V N107D Y123M G174N",4
"lib2","SARS-CoV-2","TGCGCTGGCAGACTAA",11,4.98,NA,NA,NA,NA,NA,NA,"stop","K26L V37N P161T Y175*",4
"lib2","SARS-CoV-2","TGCGCTGTTCATAATC",2,55.46,10.74,-0.1,0.05,2.95,1.06,0,"1 nonsynonymous","L38F",1
"lib2","SARS-CoV-2","TGCGCTTCTGCTATAA",6,79,10.74,-0.1,0.04,2.87,1.12,0,"1 nonsynonymous","N1Y",1
"lib2","SARS-CoV-2","TGCGCTTGCTACATTC",7,76.32,10.5,-0.33,0.05,2.92,1.09,0,">1 nonsynonymous","E10I T201L",2
"lib2","SARS-CoV-2","TGCGCTTTACAGATAC",8,13.36,NA,NA,NA,NA,NA,NA,"stop","I104*",1
"lib2","SARS-CoV-2","TGCGCTTTGGCCAAAG",12,77.57,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","N1R W23L D34G S43T W106I P169A",6
"lib2","SARS-CoV-2","TGCGCTTTTCCCTGGC",4,25.92,10.68,-0.16,0.05,2.89,1.1,0,">1 nonsynonymous","P7T D97H T201D",3
"lib2","SARS-CoV-2","TGCGGAAAAACCAACC",4,46.7,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35R V77L G101P Y123L",4
"lib2","SARS-CoV-2","TGCGGAAAATTTGAAT",4,81.73,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2C G86R N107Y Y175G",4
"lib2","SARS-CoV-2","TGCGGAAACAAGATTA",9,242.39,9.89,-0.95,0.08,2.32,1.05,0,">1 nonsynonymous","F99L E141S",2
"lib2","SARS-CoV-2","TGCGGAAGCCAAGTAC",1,34.94,6.16,-4.67,1.04,1.5,1.18,0.04,">1 nonsynonymous","V103F P177K",2
"lib2","SARS-CoV-2","TGCGGACAAATACGAC",3,8.93,7.65,-3.19,0.45,1.5,1,0.07,">1 nonsynonymous","A105K G152L",2
"lib2","SARS-CoV-2","TGCGGACCACTAACAT",11,103.69,9.9,-0.93,0.08,2.44,1.02,0,"1 nonsynonymous","S19K",1
"lib2","SARS-CoV-2","TGCGGACTCCACGGTT",3,102.89,10.84,0,0.05,2.89,1.13,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","TGCGGAGAAATTGGTA",2,24.51,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L95M S108F",2
"lib2","SARS-CoV-2","TGCGGAGAAGTCACAT",3,9.7,10.58,-0.25,0.15,2.75,1.23,0.01,"1 nonsynonymous","G83Q",1
"lib2","SARS-CoV-2","TGCGGAGGCAGAGTAC",2,1.44,NA,NA,NA,NA,NA,NA,"stop","G51* N58M R136K F167I C195G",5
"lib2","SARS-CoV-2","TGCGGATAAAAAATTA",10,164.07,10.86,0.02,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGGATCTTTACGTT",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M Q176S",2
"lib2","SARS-CoV-2","TGCGGATGCAGCCCAC",2,67.11,10.69,-0.15,0.04,2.93,1.08,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","TGCGGCAAATACGGCG",9,73.54,6,-4.84,2,3,1.2,0,">1 nonsynonymous","F8T D112Y P149T",3
"lib2","SARS-CoV-2","TGCGGCATACAGCTGA",4,39.97,6,-4.84,2,2.43,1.25,0,">1 nonsynonymous","G51H T63L L95G L122H R127L E141S P169Q",7
"lib2","SARS-CoV-2","TGCGGCCAAACCCTTT",2,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9S D68P G83P C102P",4
"lib2","SARS-CoV-2","TGCGGCGTTCCGGGAT",14,6.74,NA,NA,NA,NA,NA,NA,"stop","E10G T55G W106K N120* T201S",5
"lib2","SARS-CoV-2","TGCGGCTAATGACGGA",16,123.23,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C31L G74R S129M",3
"lib2","SARS-CoV-2","TGCGGCTCAAGATACA",17,23.91,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A81Y L183S",2
"lib2","SARS-CoV-2","TGCGGGCACAAATCGA",3,17.09,6.19,-4.65,0.64,1.5,1.09,0.02,">1 nonsynonymous","L5Q S43H L60P G83H I88G G101A E135M",7
"lib2","SARS-CoV-2","TGCGGGCTCTTTATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","G83V K132*",2
"lib2","SARS-CoV-2","TGCGGGGACCCGCAGT",3,52.17,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F99W K114R C150F Y178W",4
"lib2","SARS-CoV-2","TGCGGGGCACCAGAAG",6,21.41,6,-4.84,2,1.5,1.16,0.01,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","TGCGGGGCGTCCCCAC",6,36.46,9.89,-0.95,0.04,1.92,1,0,">1 nonsynonymous","N64W W106S L122T A192E",4
"lib2","SARS-CoV-2","TGCGGGGGCATAACAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S19D D34N K87P N110A K128*",5
"lib2","SARS-CoV-2","TGCGGGGTCCATCTCT",4,67.55,9.61,-1.23,0.14,1.79,1.09,0.01,">1 nonsynonymous","C61T G83I T148M E186H",4
"lib2","SARS-CoV-2","TGCGGGGTGAACTCGC",3,27.75,9.69,-1.14,0.06,2.88,1.06,0,"1 nonsynonymous","Y165H",1
"lib2","SARS-CoV-2","TGCGGGTGATACTACC",5,99.53,9.91,-0.92,0.09,2.33,1.01,0,">1 nonsynonymous","V11T Q84I",2
"lib2","SARS-CoV-2","TGCGGTAAACATCACG",1,28.27,8.69,-2.15,0.29,1.75,1.2,0.05,">1 nonsynonymous","P7L T100H G155W",3
"lib2","SARS-CoV-2","TGCGGTAAATACCTAT",6,15.15,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41G T55V L60Q S129Y V181R P197S",6
"lib2","SARS-CoV-2","TGCGGTAACATCAGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6P E10* L60H T100I P161M",5
"lib2","SARS-CoV-2","TGCGGTATAAAACACC",3,57.86,9.78,-1.06,0.09,1.99,1.04,0,">1 nonsynonymous","K48G A190V",2
"lib2","SARS-CoV-2","TGCGGTATTACAGGTG",11,192.87,10.21,-0.62,0.04,2.84,1.06,0,">1 nonsynonymous","L57T S139T",2
"lib2","SARS-CoV-2","TGCGGTCCAGCTTTTA",5,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3W W106A G146M E154N",4
"lib2","SARS-CoV-2","TGCGGTCTAACCGAGT",2,12.27,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9V V103Y F156Y",3
"lib2","SARS-CoV-2","TGCGGTTGAATCATCT",1,19.33,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N58P G101F",2
"lib2","SARS-CoV-2","TGCGGTTGTGGTCTTG",2,46.22,10.26,-0.58,0.07,2.72,1.04,0,">1 nonsynonymous","P7K R16I A81S L188M",4
"lib2","SARS-CoV-2","TGCGGTTGTTATACAT",5,31.32,6,-4.84,2,1.5,1.13,0.05,">1 nonsynonymous","L5R C31A C61Y I142K",4
"lib2","SARS-CoV-2","TGCGGTTTAACAACAC",2,27.25,9.27,-1.57,0.06,3,1.02,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","TGCGTAAAAGGATAAG",6,9.77,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V103S F156S",2
"lib2","SARS-CoV-2","TGCGTAAAATCTTTTT",4,2.04,NA,NA,NA,NA,NA,NA,"stop","G155* P197K",2
"lib2","SARS-CoV-2","TGCGTAACAAAAATTA",1,5.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113K R136T N171K",3
"lib2","SARS-CoV-2","TGCGTAACACCTGGGG",6,61.63,8.57,-2.26,0.07,2.81,1.02,0,">1 nonsynonymous","L5T A14N S53H Y119N P133S",5
"lib2","SARS-CoV-2","TGCGTAATTGTCGTTC",3,62.97,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","N13S Y35W F44S I88Q F126C N157Q K199P",7
"lib2","SARS-CoV-2","TGCGTACAAAGATGCC",14,166.42,9.79,-1.05,0.05,2.06,1.06,0,">1 nonsynonymous","N4R Y91L E135R",3
"lib2","SARS-CoV-2","TGCGTACACACGGGAC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40D T46A Y93M F134P F156R F167N G174T",7
"lib2","SARS-CoV-2","TGCGTACGATACCCAA",6,59.54,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","P7L Y93G S129D",3
"lib2","SARS-CoV-2","TGCGTACGTTATTATT",2,0.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T3K",1
"lib2","SARS-CoV-2","TGCGTACTCAACATCA",1,57.16,10.44,-0.39,0.04,2.88,1.08,0,">1 nonsynonymous","S129N G152C",2
"lib2","SARS-CoV-2","TGCGTAGATCATCTAC",3,56.08,10.65,-0.18,0.04,2.98,1.05,0,">1 nonsynonymous","C61V T85A",2
"lib2","SARS-CoV-2","TGCGTAGCCAACCTAG",2,98.01,9.38,-1.46,0.09,1.89,1,0,">1 nonsynonymous","C6N Y35A T100N",3
"lib2","SARS-CoV-2","TGCGTATAAACTGCTT",7,28.66,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L57S G83Y L95A R127M R136V",5
"lib2","SARS-CoV-2","TGCGTATATTTTACTA",11,189.71,10.61,-0.22,0.05,2.88,1.07,0,"1 nonsynonymous","G116S",1
"lib2","SARS-CoV-2","TGCGTATTAAATTAGA",5,8.04,6,-4.84,2,1.5,1.12,0.06,">1 nonsynonymous","L5H F62R Y165C",3
"lib2","SARS-CoV-2","TGCGTATTCGTTCGAG",2,54.53,10.51,-0.33,0.08,2.91,1.09,0,">1 nonsynonymous","T100C G152L",2
"lib2","SARS-CoV-2","TGCGTCAAACAACCAA",3,7.22,NA,NA,NA,NA,NA,NA,"stop","T15* K56R Y178C",3
"lib2","SARS-CoV-2","TGCGTCCCAAAAGCAA",5,17.67,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","F99S C158M",2
"lib2","SARS-CoV-2","TGCGTCCCCAGTCAAA",11,130.57,8.11,-2.73,0.09,2.41,1.05,0,">1 nonsynonymous","N13S S113T N120T P197Q",4
"lib2","SARS-CoV-2","TGCGTCTAAACATGTA",6,60.84,8.07,-2.77,0.15,1.5,1.07,0.01,">1 nonsynonymous","C6S K48L T55K T85F K132V",5
"lib2","SARS-CoV-2","TGCGTCTCGAAACTAC",4,18.89,7.83,-3.01,0.24,1.5,1.1,0.02,">1 nonsynonymous","C6M R127S",2
"lib2","SARS-CoV-2","TGCGTCTGGGCGGAAT",11,139.49,10.61,-0.23,0.03,2.91,1.04,0,">1 nonsynonymous","T46L D97S",2
"lib2","SARS-CoV-2","TGCGTCTTCGCAATAC",3,102.61,10.81,-0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCGTGAATTAAAAGG",15,289.6,10.6,-0.24,0.04,2.92,1.05,0,">1 nonsynonymous","N30K D90Q",2
"lib2","SARS-CoV-2","TGCGTGCTTGTGGAAT",6,50.03,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12N R25F S139W",3
"lib2","SARS-CoV-2","TGCGTGGATATTGGAA",5,31.76,7.25,-3.59,0.43,1.5,1.3,0.05,">1 nonsynonymous","P7T T63R N107M G117D K128G",5
"lib2","SARS-CoV-2","TGCGTTAAAGTGTTAA",11,57.6,8.48,-2.36,0.14,1.52,1.11,0.01,">1 nonsynonymous","P54H D112V P149Q",3
"lib2","SARS-CoV-2","TGCGTTAACATTCGCG",1,120.93,7.69,-3.15,0.13,1.72,1.07,0.01,">1 nonsynonymous","T55Q I104A S113L S200A",4
"lib2","SARS-CoV-2","TGCGTTACAGGAGATA",4,53.65,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S19E V52N",2
"lib2","SARS-CoV-2","TGCGTTACCAACCCTT",10,178.72,10.21,-0.63,0.04,2.76,1.05,0,">1 nonsynonymous","T15M E141H",2
"lib2","SARS-CoV-2","TGCGTTAGAGGAGAGG",5,32.27,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S69Y F134L Y165T L183R P197R",5
"lib2","SARS-CoV-2","TGCGTTGACGTAGAGT",1,7.74,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S36K K56L P96L V103E",4
"lib2","SARS-CoV-2","TGCGTTGAGTCAGAAA",1,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107H K128S",2
"lib2","SARS-CoV-2","TGCGTTTGTGAGCTTA",11,113.14,10.68,-0.16,0.04,2.94,1.06,0,"1 nonsynonymous","C61I",1
"lib2","SARS-CoV-2","TGCGTTTGTTTTAAGT",2,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64G A81V C158D",3
"lib2","SARS-CoV-2","TGCTAAAAAATTTAAG",2,2.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48F P96H K128I G174A S200W",5
"lib2","SARS-CoV-2","TGCTAAAAATAAAAAT",1,33.98,8.46,-2.38,0.19,1.79,1.13,0.01,">1 nonsynonymous","R127L E141Q",2
"lib2","SARS-CoV-2","TGCTAAAAATAGATAC",2,22.98,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","N24S S69P T85F",3
"lib2","SARS-CoV-2","TGCTAAAACACAAGAA",4,70.6,6.11,-4.73,0.91,1.5,1.2,0.02,">1 nonsynonymous","T3S E10Y N24H G86L",4
"lib2","SARS-CoV-2","TGCTAAAACACCCAAC",3,7.33,6.52,-4.32,2,1.5,1.21,0.06,">1 nonsynonymous","L57N D97H K128Y R136C Q168L Y175E",6
"lib2","SARS-CoV-2","TGCTAAAATACCAAGG",15,230.94,10.74,-0.09,0.02,2.95,1.06,0,"1 nonsynonymous","Y66V",1
"lib2","SARS-CoV-2","TGCTAAACAATAAAGA",1,0,NA,NA,NA,NA,NA,NA,"stop","A22N L122* K128P",3
"lib2","SARS-CoV-2","TGCTAAACTCTGTCCA",14,3.28,NA,NA,NA,NA,NA,NA,"stop","S29H L60* L183F",3
"lib2","SARS-CoV-2","TGCTAAAGCCTTGCAA",7,129.93,10.81,-0.03,0.04,2.92,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCTAAATACACGAAT",8,146.88,9.51,-1.32,0.06,1.91,1.03,0,">1 nonsynonymous","F8P N64L",2
"lib2","SARS-CoV-2","TGCTAAATAGACTAAA",7,4.57,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGCTAAATATACACTG",3,0.87,NA,NA,NA,NA,NA,NA,"stop","N13L F99K Q144L P161G Q176* P191L",6
"lib2","SARS-CoV-2","TGCTAAATCGCCAACT",5,59.4,6.17,-4.66,0.46,1.5,1.09,0.01,">1 nonsynonymous","G101L Y143S C150M",3
"lib2","SARS-CoV-2","TGCTAAATCTTTCAAT",4,8.81,8.59,-2.25,0.33,1.5,1,0.03,">1 nonsynonymous","Y35K E141R P149K E186Y",4
"lib2","SARS-CoV-2","TGCTAAATGCGTAGGT",11,39.3,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","A14V V52P E141M F156L P161T T170H F185V",7
"lib2","SARS-CoV-2","TGCTAAATTTCTTGAT",9,130.4,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T55P G172T",2
"lib2","SARS-CoV-2","TGCTAACACCATCCGA",7,80.18,10.76,-0.08,0.04,2.96,1.07,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","TGCTAACATTACACTA",2,65.98,10.89,0.05,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCTAACCTGACTCTC",9,19.46,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C61K Y93P A105T V181S",4
"lib2","SARS-CoV-2","TGCTAACTAACTAATA",1,7.22,NA,NA,NA,NA,NA,NA,"stop","N4F G51* I88K",3
"lib2","SARS-CoV-2","TGCTAACTCAAATCCC",1,41.62,10.55,-0.28,0.08,2.84,1.11,0,">1 nonsynonymous","G9P A42L",2
"lib2","SARS-CoV-2","TGCTAACTGTCGAATA",5,157.15,10.77,-0.07,0.03,2.93,1.09,0,"1 nonsynonymous","L5M",1
"lib2","SARS-CoV-2","TGCTAACTTCTGGGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59K D68E D90S V103Y S200L",5
"lib2","SARS-CoV-2","TGCTAAGAACCTTACT",6,61.26,9.78,-1.05,0.14,2.16,1.17,0.01,">1 nonsynonymous","C61E E76T",2
"lib2","SARS-CoV-2","TGCTAAGAACTCTAAA",10,133.77,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50M C150H",2
"lib2","SARS-CoV-2","TGCTAAGGACATACCG",3,11.7,NA,NA,NA,NA,NA,0.12,"1 nonsynonymous","C49D",1
"lib2","SARS-CoV-2","TGCTAAGGACCACAAC",5,66.71,9.61,-1.22,0.05,1.96,1.08,0,">1 nonsynonymous","D34R N40T L60S A67V",4
"lib2","SARS-CoV-2","TGCTAAGGCACCAAAA",4,82.11,9.24,-1.6,0.07,1.88,1.12,0,">1 nonsynonymous","A14C R127S",2
"lib2","SARS-CoV-2","TGCTAAGTATCAGCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N P82T",2
"lib2","SARS-CoV-2","TGCTAATAATGCTGCT",3,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K Y66R F99R L111M Y159R",5
"lib2","SARS-CoV-2","TGCTAATCATGATTAG",1,39.94,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L60H G86L N92S D97R P149W E154Y S184R",7
"lib2","SARS-CoV-2","TGCTAATGACGGTCCT",1,3.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I72K T85S G117W",3
"lib2","SARS-CoV-2","TGCTAATGCCACAAGC",1,38.32,10.72,-0.11,0.05,2.95,1.04,0,"1 nonsynonymous","Q144R",1
"lib2","SARS-CoV-2","TGCTAATGCTACACCC",7,96.18,7.07,-3.77,0.26,1.5,1.16,0.01,">1 nonsynonymous","L57Y R127A P149R",3
"lib2","SARS-CoV-2","TGCTAATTCTCAATCA",9,78.59,9.85,-0.98,0.07,2.45,1,0,">1 nonsynonymous","N58Q Y91S",2
"lib2","SARS-CoV-2","TGCTAATTGTTACACA",8,91.37,8.31,-2.52,0.13,1.61,1.08,0.01,"1 nonsynonymous","R179V",1
"lib2","SARS-CoV-2","TGCTAATTTTGTTAGA",1,7.93,8.21,-2.63,0.33,1.5,1.01,0.03,">1 nonsynonymous","G86M G101S C158L",3
"lib2","SARS-CoV-2","TGCTACAAACAAATTG",1,0.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K114S T201M",2
"lib2","SARS-CoV-2","TGCTACAAGGCTTAGC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V T148R Y165P A190D",4
"lib2","SARS-CoV-2","TGCTACAGATTATCAG",26,338.85,9.54,-1.3,0.03,1.97,1.04,0,">1 nonsynonymous","S29E R127N",2
"lib2","SARS-CoV-2","TGCTACAGGAAAACAT",1,13.28,10.1,-0.74,0.06,2.9,1.01,0,">1 nonsynonymous","V52S S129K P191T",3
"lib2","SARS-CoV-2","TGCTACAGGATGCAAG",10,10.46,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T15C L60Q F99L T170S",4
"lib2","SARS-CoV-2","TGCTACATAAATATAA",6,46.19,9.54,-1.29,0.05,2.07,1.05,0,">1 nonsynonymous","V37W K94V P149H T201N",4
"lib2","SARS-CoV-2","TGCTACATTGCCTCAC",4,33.8,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A81N N109Y D137A",3
"lib2","SARS-CoV-2","TGCTACCAAAGCTCGT",1,0,NA,NA,NA,NA,NA,NA,"stop","F62* F134P",2
"lib2","SARS-CoV-2","TGCTACCATATCTGAG",1,51.75,10.71,-0.13,0.04,2.93,1.05,0,">1 nonsynonymous","L5M D90A",2
"lib2","SARS-CoV-2","TGCTACCATTATTAAT",2,13.59,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T63L Y93Q I104K Y121L G146T",5
"lib2","SARS-CoV-2","TGCTACCCAGCTGAGC",5,18.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102S",1
"lib2","SARS-CoV-2","TGCTACCCCCCTGATA",9,129.99,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y91K F99H L125N Q176V",4
"lib2","SARS-CoV-2","TGCTACCTGATCAGGA",10,3.87,NA,NA,NA,NA,NA,NA,"stop","S45E G146*",2
"lib2","SARS-CoV-2","TGCTACCTTTATGACC",2,0.12,NA,NA,NA,NA,NA,NA,"stop","V11F A105F A145*",3
"lib2","SARS-CoV-2","TGCTACGGAATTATAC",4,31.22,6.51,-4.32,0.46,1.5,1.14,0.03,">1 nonsynonymous","C61Q F99S T201M",3
"lib2","SARS-CoV-2","TGCTACGTATAATACA",6,21.44,9.42,-1.42,0.08,2.09,1,0,">1 nonsynonymous","R25W A33Y T63L N171S",4
"lib2","SARS-CoV-2","TGCTACTTTCTTCCGT",9,238.25,10.74,-0.09,0.03,2.94,1.07,0,"1 nonsynonymous","Y66I",1
"lib2","SARS-CoV-2","TGCTAGACACAAATAC",6,0.42,NA,NA,NA,NA,NA,NA,"stop","R27A C49F L57N Q144*",4
"lib2","SARS-CoV-2","TGCTAGACATTGTCAG",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27W D68M V103W G152L Q168P V180C",6
"lib2","SARS-CoV-2","TGCTAGACCAGTTATT",7,50.19,9.01,-1.82,0.11,1.68,1.11,0.01,"1 nonsynonymous","I104K",1
"lib2","SARS-CoV-2","TGCTAGAGATCATAAC",8,46.46,6.42,-4.41,0.7,1.5,1.21,0.04,">1 nonsynonymous","N4Y V103A N120K",3
"lib2","SARS-CoV-2","TGCTAGAGCTTGACTA",9,103.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I104M R127P",2
"lib2","SARS-CoV-2","TGCTAGATCTTACGAA",6,104.86,10.85,0.02,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCTAGCAGGAGAACT",3,48.32,8.52,-2.32,0.28,1.52,1.11,0.03,">1 nonsynonymous","N107V S147F L188M",3
"lib2","SARS-CoV-2","TGCTAGCGAGCGGTAG",13,67.72,8.05,-2.79,0.24,1.64,1.12,0.02,">1 nonsynonymous","C61M D90L Q144T F156G",4
"lib2","SARS-CoV-2","TGCTAGCGGCGAACCG",5,26.74,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V11N N64T G86R D90I A105R L162Q",6
"lib2","SARS-CoV-2","TGCTAGCTACGTATTT",1,0.4,NA,NA,NA,NA,NA,NA,"stop","V20S S41* K87T L122Q",4
"lib2","SARS-CoV-2","TGCTAGCTGAAACCAA",10,12.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93L K132E N151A F160S P169L G174V L183R C195W",8
"lib2","SARS-CoV-2","TGCTAGGATGGAGGAC",3,36.9,7.52,-3.32,0.32,1.5,1.1,0.03,">1 nonsynonymous","V37S P82E",2
"lib2","SARS-CoV-2","TGCTAGGTGATCTTAA",5,85.09,6.06,-4.78,1.05,1.5,1.18,0.02,">1 nonsynonymous","T3P G9V Y119A P177S",4
"lib2","SARS-CoV-2","TGCTAGTATACAAAAA",2,87.6,10.76,-0.07,0.05,2.91,1.08,0,"1 nonsynonymous","H189Y",1
"lib2","SARS-CoV-2","TGCTAGTCATTATCTC",5,93.89,9.48,-1.35,0.04,2.75,1.09,0,">1 nonsynonymous","G51S F156N",2
"lib2","SARS-CoV-2","TGCTAGTGCCACCCGA",2,11.41,6,-4.84,1.83,3,1.19,0.02,">1 nonsynonymous","P7C D68W V180M A190D",4
"lib2","SARS-CoV-2","TGCTAGTGTGTCCGTG",2,19.75,9.01,-1.83,0.26,1.5,1,0.04,">1 nonsynonymous","L60Q Y91S F99A P197T",4
"lib2","SARS-CoV-2","TGCTATAAAAAGCTAA",2,10.12,6.92,-3.92,0.49,1.56,1.1,0.06,">1 nonsynonymous","T15M I88Y K94I",3
"lib2","SARS-CoV-2","TGCTATAAAGTTTCGG",9,76.86,10.07,-0.77,0.06,2.67,1.01,0,">1 nonsynonymous","T15G S45K L122F",3
"lib2","SARS-CoV-2","TGCTATAATAAAAGAC",1,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26T L60W D68A G74M K87N Y119L F156Y",7
"lib2","SARS-CoV-2","TGCTATAATTGTAAAC",4,90.06,10.43,-0.41,0.04,2.94,1.07,0,"1 nonsynonymous","F156Y",1
"lib2","SARS-CoV-2","TGCTATACGCCCAACG",26,309.74,7.96,-2.87,0.12,1.5,1.08,0,"1 nonsynonymous","D112C",1
"lib2","SARS-CoV-2","TGCTATAGAAATTGAA",1,26,6,-4.84,0.7,3,1.12,0,">1 nonsynonymous","F17T T55F Y178L",3
"lib2","SARS-CoV-2","TGCTATAGGCGTTAGA",8,174.1,9.17,-1.67,0.09,2.09,1.09,0,">1 nonsynonymous","C49L K87A L122T",3
"lib2","SARS-CoV-2","TGCTATATATCACCCA",3,15.06,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","I2N A33S S43W K56G R78L G83F E186V",7
"lib2","SARS-CoV-2","TGCTATCAATCACAGT",2,7.21,9.29,-1.54,0.19,2.85,1.1,0.01,">1 nonsynonymous","F12R R73S G117D",3
"lib2","SARS-CoV-2","TGCTATCCAGTTAAAA",2,45.49,9.16,-1.68,0.04,3,1.07,0,"1 nonsynonymous","G117E",1
"lib2","SARS-CoV-2","TGCTATCCGGGTAAAT",4,56.51,10.34,-0.5,0.06,3,1.02,0,">1 nonsynonymous","L60Q I104M F160V",3
"lib2","SARS-CoV-2","TGCTATCGAAGTACGC",4,50.97,10.73,-0.11,0.05,2.94,1.01,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","TGCTATCGAGAAATGT",9,189.69,10.69,-0.14,0.03,2.91,1.09,0,">1 nonsynonymous","A42P N120K V153W",3
"lib2","SARS-CoV-2","TGCTATGGGAACGGTA",16,311.34,10.04,-0.8,0.05,2.53,1.06,0,"1 nonsynonymous","D34L",1
"lib2","SARS-CoV-2","TGCTATGGTAAAAATG",6,80.35,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F12S I88N",2
"lib2","SARS-CoV-2","TGCTATTAATAAATAT",3,0,NA,NA,NA,NA,NA,NA,"stop","F8C F70* Y119K",3
"lib2","SARS-CoV-2","TGCTATTATCGTATTG",5,32.87,6,-4.84,2,1.5,1.08,0.06,">1 nonsynonymous","C6G D34R N120P S139P",4
"lib2","SARS-CoV-2","TGCTATTTATGCAGAA",1,72.75,8.2,-2.64,0.23,1.5,1.09,0.02,">1 nonsynonymous","A18D K48R W106V Y178N",4
"lib2","SARS-CoV-2","TGCTATTTTCAGAGTA",5,51.28,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","S41G A81S N157V",3
"lib2","SARS-CoV-2","TGCTCAAAAAATCGGC",4,7.98,7.13,-3.71,0.78,1.5,1,0.07,">1 nonsynonymous","A18K N30R L183D",3
"lib2","SARS-CoV-2","TGCTCAACATCTAAAT",1,5.78,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","G9A L38H G83F P96C Y175S",5
"lib2","SARS-CoV-2","TGCTCAACCGTAAATT",1,12.55,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R27L G51F G83R G116L F167L",5
"lib2","SARS-CoV-2","TGCTCAAGCATATATA",4,17.96,7.72,-3.11,0.26,1.5,1.09,0.03,">1 nonsynonymous","R16G S41I G117P F156L",4
"lib2","SARS-CoV-2","TGCTCAATCCTAACGA",4,59.83,10.91,0.08,0.06,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TGCTCAATGAGGCGCG",18,6.84,NA,NA,NA,NA,NA,NA,"stop","R27* F62L",2
"lib2","SARS-CoV-2","TGCTCAATGCGGCTAG",9,51.8,9.23,-1.6,0.24,1.5,1.07,0.03,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","TGCTCACATTCTAATG",9,41.04,9.36,-1.47,0.15,1.63,1.09,0.01,">1 nonsynonymous","T3L A89M",2
"lib2","SARS-CoV-2","TGCTCACCATCGCCTA",4,60.05,6.44,-4.4,0.59,1.5,1.2,0.04,">1 nonsynonymous","Y93I N109L",2
"lib2","SARS-CoV-2","TGCTCACGACTAGGCT",1,5.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y T85P N151T",3
"lib2","SARS-CoV-2","TGCTCACGTTCAAAGA",2,56.62,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F62S K94P P177S",3
"lib2","SARS-CoV-2","TGCTCACTTATCAGAT",5,94.04,10.08,-0.75,0.05,2.95,1.06,0,">1 nonsynonymous","T3A V37S K87Q S147I",4
"lib2","SARS-CoV-2","TGCTCATAAGGCAACT",6,69.92,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","P7L I104N",2
"lib2","SARS-CoV-2","TGCTCATCCATGAACC",1,28.04,10.75,-0.08,0.09,2.75,1.25,0,"1 nonsynonymous","Y50F",1
"lib2","SARS-CoV-2","TGCTCCAAATGATGTA",17,200.1,9.95,-0.88,0.06,2.4,1.04,0,">1 nonsynonymous","L57G K128M",2
"lib2","SARS-CoV-2","TGCTCCACGATGGTCC",5,0.47,NA,NA,NA,NA,NA,NA,"stop","C61P V77* T100C N107M L122V",5
"lib2","SARS-CoV-2","TGCTCCACGGACCAAA",3,15.18,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","D34V D97G Y119K F156M F167T G196A",6
"lib2","SARS-CoV-2","TGCTCCATGAGAAATT",9,93.79,6,-4.84,2,3,1.16,0,">1 nonsynonymous","T100N R124G",2
"lib2","SARS-CoV-2","TGCTCCATTTAAAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60A Y91N",2
"lib2","SARS-CoV-2","TGCTCCCTAACATTGC",3,9.36,6,-4.84,2,3,1.12,0,"1 nonsynonymous","R179E",1
"lib2","SARS-CoV-2","TGCTCCCTCCTTAATC",14,118.05,9.24,-1.6,0.15,1.5,1.03,0.01,">1 nonsynonymous","K56G V103T K128V Q168R",4
"lib2","SARS-CoV-2","TGCTCCCTCTAAATCC",16,209.8,9.98,-0.86,0.04,2.49,1.07,0,">1 nonsynonymous","F44Q K56E E141W",3
"lib2","SARS-CoV-2","TGCTCCGATACTATTA",12,98.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N120C C158H",2
"lib2","SARS-CoV-2","TGCTCCGCGATAGCGC",3,79.85,10.58,-0.25,0.04,2.99,1,0,"1 nonsynonymous","F44V",1
"lib2","SARS-CoV-2","TGCTCCGCTGTACTCC",1,34.97,9.63,-1.21,0.12,2.55,1.07,0.01,">1 nonsynonymous","N40P F47L G155T",3
"lib2","SARS-CoV-2","TGCTCCGTACCAAGGA",2,13.61,9.86,-0.98,0.13,2.56,1.21,0.01,">1 nonsynonymous","I2V Y35D F44Q F134Y",4
"lib2","SARS-CoV-2","TGCTCCGTCCGACACA",2,67.55,6,-4.84,2,1.5,1.12,0.02,"1 nonsynonymous","C158I",1
"lib2","SARS-CoV-2","TGCTCCTGGAAGAAAC",8,36.2,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L5P T85F D112K G172Y",4
"lib2","SARS-CoV-2","TGCTCCTTGGCTTATA",1,11.49,8.62,-2.21,0.23,1.54,1.1,0.03,">1 nonsynonymous","T3C S45Y S108T Y143H T201K",5
"lib2","SARS-CoV-2","TGCTCGAAAAACTTAT",4,25.86,9.17,-1.66,0.13,2.46,1.08,0.01,">1 nonsynonymous","F12L T85R G155F",3
"lib2","SARS-CoV-2","TGCTCGAAATAAAGAG",4,58.92,9.78,-1.06,0.06,2.1,1.03,0,">1 nonsynonymous","N58V V180T",2
"lib2","SARS-CoV-2","TGCTCGCACCCGGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y165*",1
"lib2","SARS-CoV-2","TGCTCGCTCCCAGCAG",3,23.68,8.86,-1.98,0.05,2.23,1,0,">1 nonsynonymous","V32S S41K C61T Y123N",4
"lib2","SARS-CoV-2","TGCTCGTCTATAAAAA",4,49.31,8.3,-2.53,0.15,2.86,1.09,0.01,">1 nonsynonymous","I2T N157P A190G",3
"lib2","SARS-CoV-2","TGCTCGTTTTTAATTT",1,33.62,10.32,-0.52,0.06,2.92,1.04,0,">1 nonsynonymous","N30S T100M I104V",3
"lib2","SARS-CoV-2","TGCTCTAAACAACAAC",6,121.41,9.45,-1.39,0.08,1.96,1.1,0,"1 nonsynonymous","D137V",1
"lib2","SARS-CoV-2","TGCTCTAAATCCAACT",6,43.55,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V32H G101A",2
"lib2","SARS-CoV-2","TGCTCTACAATATGAT",5,37.11,NA,NA,NA,NA,NA,NA,"stop","Y39L F160* H189Y",3
"lib2","SARS-CoV-2","TGCTCTAGGACAAATC",1,1.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S Q168S A192E",3
"lib2","SARS-CoV-2","TGCTCTAGGGTTACCC",1,7.49,10.74,-0.1,0.1,3,1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGCTCTATACTTGATG",2,8.82,10.53,-0.3,0.17,2.93,1,0.01,">1 nonsynonymous","A42V G83M",2
"lib2","SARS-CoV-2","TGCTCTCAACACGTAC",2,71.07,9.4,-1.44,0.06,2.75,1.04,0,">1 nonsynonymous","N171S Q176L",2
"lib2","SARS-CoV-2","TGCTCTCAAGATAATG",13,197.15,10.75,-0.09,0.06,2.83,1.15,0,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","TGCTCTCACCACTAAG",3,0.82,NA,NA,NA,NA,NA,NA,"stop","N1*",1
"lib2","SARS-CoV-2","TGCTCTCAGCGAGTTT",3,0.37,NA,NA,NA,NA,NA,NA,"stop","A22* I72S K94V",3
"lib2","SARS-CoV-2","TGCTCTCAGTTCGGCT",3,20.47,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T55D K87V R136K G146Y R179S",5
"lib2","SARS-CoV-2","TGCTCTCTAACATAAA",2,28.35,10.46,-0.37,0.08,2.9,1.04,0,">1 nonsynonymous","T63P G152H",2
"lib2","SARS-CoV-2","TGCTCTCTAGGAATAA",8,35.06,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","C6R N92K T140P",3
"lib2","SARS-CoV-2","TGCTCTGAGAGCTAGT",3,5.55,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","G86C R124H K128Y A145W",4
"lib2","SARS-CoV-2","TGCTCTGCATGGTATT",2,1.33,NA,NA,NA,NA,NA,NA,"stop","Y35Q P149* P197Q",3
"lib2","SARS-CoV-2","TGCTCTGCTACAATAC",1,1.88,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib2","SARS-CoV-2","TGCTCTGCTACATTTG",14,50.21,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6L C61R K87R K94H Y121P",5
"lib2","SARS-CoV-2","TGCTCTGGACCCAAAG",3,5.79,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","G9S K87T W106L G146L Q163L",5
"lib2","SARS-CoV-2","TGCTCTGGAGTACTTA",4,18.41,8.93,-1.9,0.16,2.49,1.32,0.01,">1 nonsynonymous","K128N I142S",2
"lib2","SARS-CoV-2","TGCTCTTAAACATGCT",2,2.58,NA,NA,NA,NA,NA,NA,"stop","F44R D90S G116* V182K",4
"lib2","SARS-CoV-2","TGCTCTTAGCTTAAAG",2,0.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L131M",1
"lib2","SARS-CoV-2","TGCTCTTGGCCCTAGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* T85H D90P K128N",4
"lib2","SARS-CoV-2","TGCTCTTGTGGAGGAA",8,35.31,6,-4.84,0.5,3,1.14,0,">1 nonsynonymous","G83Y V103R R124P",3
"lib2","SARS-CoV-2","TGCTCTTTAGTAACAG",10,207.11,9.7,-1.14,0.07,2.05,1.03,0,">1 nonsynonymous","S36R P96C",2
"lib2","SARS-CoV-2","TGCTCTTTCATTGCCG",4,55.63,10.81,-0.03,0.06,2.96,1.02,0,">1 nonsynonymous","I2M N130M",2
"lib2","SARS-CoV-2","TGCTGAAAGACATACT",4,15.05,6,-4.84,2,3,1.08,0,">1 nonsynonymous","P7I I28R A89N I142L G152L L188A",6
"lib2","SARS-CoV-2","TGCTGAACTAACTCCG",1,10.78,10.99,0.16,0.09,2.86,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCTGAATATCCGATG",5,27.25,8.65,-2.19,0.13,2.98,1.08,0.01,">1 nonsynonymous","K26V S113Y",2
"lib2","SARS-CoV-2","TGCTGAATGAATATAG",10,13.24,NA,NA,NA,NA,NA,NA,"stop","V32* Y39E F44N G51R L122T",5
"lib2","SARS-CoV-2","TGCTGAATGCTCCTAA",1,24.4,8.82,-2.01,0.25,1.82,1.12,0.01,">1 nonsynonymous","S45F N64Q Y121M",3
"lib2","SARS-CoV-2","TGCTGACGAAAGGGGC",3,19.12,6,-4.84,2,3,1.07,0,">1 nonsynonymous","L38V D90R T140E G146N V173G",5
"lib2","SARS-CoV-2","TGCTGACTCCACTCCA",5,119.1,10.25,-0.59,0.08,2.43,1.03,0,">1 nonsynonymous","T85G F134T",2
"lib2","SARS-CoV-2","TGCTGAGAAACTATGC",12,54.3,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D68K P133N",2
"lib2","SARS-CoV-2","TGCTGAGGACACAGTT",13,165.9,9.64,-1.19,0.07,2.12,1.07,0,">1 nonsynonymous","N1K S45V T55R F160L",4
"lib2","SARS-CoV-2","TGCTGAGGTCTATCTG",5,59.3,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N40E N109Y F167L",3
"lib2","SARS-CoV-2","TGCTGATAACTCGACA",5,125.5,10.18,-0.66,0.06,2.64,1.11,0,">1 nonsynonymous","N58T K132W",2
"lib2","SARS-CoV-2","TGCTGATAGTTCCAAT",2,18.83,10.64,-0.19,0.08,2.93,1.06,0,">1 nonsynonymous","A18N A33V D90R",3
"lib2","SARS-CoV-2","TGCTGATGACGACTTG",5,125.02,9.3,-1.54,0.06,1.85,1.04,0,">1 nonsynonymous","S29L S45A D90Y",3
"lib2","SARS-CoV-2","TGCTGATGTCTCAAAC",7,117.18,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10D P161F",2
"lib2","SARS-CoV-2","TGCTGATTACATAGAA",2,0.02,NA,NA,NA,NA,NA,NA,"stop","F8* T85R L122Y V173H",4
"lib2","SARS-CoV-2","TGCTGATTATCTAACG",2,103.85,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L60T R73S G83A F167S H189G",5
"lib2","SARS-CoV-2","TGCTGCAAAATACTCT",5,0.59,NA,NA,NA,NA,NA,NA,"stop","G9* F44S N64S A81* D90F H189F",6
"lib2","SARS-CoV-2","TGCTGCAATAATACTG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y93G D112P N157* A190T",4
"lib2","SARS-CoV-2","TGCTGCATAAACGCAC",10,170.94,9.58,-1.26,0.03,2.79,1.06,0,">1 nonsynonymous","C61S G152D G155V",3
"lib2","SARS-CoV-2","TGCTGCCAGTGCGGAT",7,134.73,9.05,-1.78,0.07,2.68,1.08,0,">1 nonsynonymous","F47K F156K",2
"lib2","SARS-CoV-2","TGCTGCGACACTGGCG",8,0.89,NA,NA,NA,NA,NA,NA,"stop","S36* T85W D112L G174V",4
"lib2","SARS-CoV-2","TGCTGCGCCAAAGATT",4,67.26,8.81,-2.02,0.07,2.89,1.09,0,">1 nonsynonymous","T85Y Y119I",2
"lib2","SARS-CoV-2","TGCTGCTCTCTAAATA",6,69.51,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A33Q P82H C158T",3
"lib2","SARS-CoV-2","TGCTGCTTGGGCGCAT",2,13.91,10.78,-0.06,0.06,2.91,1.03,0,"1 nonsynonymous","E141L",1
"lib2","SARS-CoV-2","TGCTGCTTTCGGACTC",4,20.21,6.95,-3.89,0.23,1.93,1.17,0.02,">1 nonsynonymous","L57M S113L",2
"lib2","SARS-CoV-2","TGCTGGAGCAGGGCTG",1,0,NA,NA,NA,NA,NA,NA,"stop","F12* T63L L131V I138Y",4
"lib2","SARS-CoV-2","TGCTGGATAAGGCTTA",3,4.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42D C61A Y91W Y121R N151F",5
"lib2","SARS-CoV-2","TGCTGGCAACCCGCTG",2,0,NA,NA,NA,NA,NA,NA,"stop","G83* L95R Y121N F134A P149E Q176L",6
"lib2","SARS-CoV-2","TGCTGGCAATACATAT",3,106.76,7.16,-3.68,0.09,1.86,1.1,0,">1 nonsynonymous","S36K C158A",2
"lib2","SARS-CoV-2","TGCTGGCGCGCAAGCG",2,0,NA,NA,NA,NA,NA,NA,"stop","V52Y V77* G101E W106R",4
"lib2","SARS-CoV-2","TGCTGGCGGGTTAAAA",4,9.91,8.9,-1.93,0.28,1.5,1,0.04,">1 nonsynonymous","F8Y K94L",2
"lib2","SARS-CoV-2","TGCTGGCTTCAGCTAA",1,22.16,10.67,-0.17,0.04,2.91,1.09,0,"1 nonsynonymous","Y91N",1
"lib2","SARS-CoV-2","TGCTGGGAAAAGTAAC",2,15.34,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P96K Y121N E141T",3
"lib2","SARS-CoV-2","TGCTGGGGATTGACGC",15,51.85,9.31,-1.53,0.38,1.5,1,0.07,">1 nonsynonymous","K94Y P133Q",2
"lib2","SARS-CoV-2","TGCTGGTACTTACCCC",3,26.81,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D98P P161F",2
"lib2","SARS-CoV-2","TGCTGGTCTCCACAGT",2,0.5,NA,NA,NA,NA,NA,NA,"stop","V77*",1
"lib2","SARS-CoV-2","TGCTGGTTCGAAGTTA",3,28.7,6.02,-4.81,1.33,1.5,1.14,0.04,">1 nonsynonymous","G83N Y119V Y143R",3
"lib2","SARS-CoV-2","TGCTGTAAAGTAATAA",3,55.18,10.71,-0.12,0.03,2.94,1.06,0,">1 nonsynonymous","G51R V173W",2
"lib2","SARS-CoV-2","TGCTGTACGAGATAAG",26,221.49,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F8Y R16Q R127S G152S L183F",5
"lib2","SARS-CoV-2","TGCTGTCCAAATTTCT",4,43.99,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A89E Y91W Y143H",3
"lib2","SARS-CoV-2","TGCTGTCTTTAGAGGG",3,0.35,NA,NA,NA,NA,NA,NA,"stop","V20Y S29Y V65* G83R N110T S139P",6
"lib2","SARS-CoV-2","TGCTGTGCAATTACCT",5,0,NA,NA,NA,NA,NA,NA,"stop","G9K Q163*",2
"lib2","SARS-CoV-2","TGCTGTGCATTCACTA",4,194.92,9.92,-0.92,0.04,2.85,1.04,0,">1 nonsynonymous","C6A K114M",2
"lib2","SARS-CoV-2","TGCTGTGCCACAAATT",15,83.74,8.15,-2.68,0.2,1.5,1.08,0.01,">1 nonsynonymous","T63C K94F",2
"lib2","SARS-CoV-2","TGCTGTGGAGACCCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39H N58V W106F T201I",4
"lib2","SARS-CoV-2","TGCTGTGTTTAATAAG",4,139.24,10.55,-0.28,0.02,2.93,1.05,0,">1 nonsynonymous","N110G L125W V173M",3
"lib2","SARS-CoV-2","TGCTGTTAAAATTAGA",1,10.04,10.05,-0.79,0.14,1.97,1,0.01,">1 nonsynonymous","Y91H Y123L T148K",3
"lib2","SARS-CoV-2","TGCTTAAACCCGACAA",4,103.8,10.08,-0.76,0.04,2.95,1.04,0,">1 nonsynonymous","Y35A G116D",2
"lib2","SARS-CoV-2","TGCTTAAATATTCTCA",3,55.08,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","V77D T148L P177C",3
"lib2","SARS-CoV-2","TGCTTAAATTATAATA",1,14.1,6,-4.84,2,3,1.2,0.01,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","TGCTTAACCCTTAAGT",7,47.03,9.77,-1.06,0.07,2.78,1.02,0,">1 nonsynonymous","F17W S147Y G155Y",3
"lib2","SARS-CoV-2","TGCTTAAGATACACAG",1,5.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41P K48D E141L",3
"lib2","SARS-CoV-2","TGCTTAAGCTGCGTTC",1,79.15,10.78,-0.05,0.13,2.66,1.15,0.01,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TGCTTAAGGACCGAAT",1,28.45,10.75,-0.09,0.05,2.94,1.08,0,">1 nonsynonymous","A42N D90N",2
"lib2","SARS-CoV-2","TGCTTAAGGCCACCGG",14,4.16,NA,NA,NA,NA,NA,NA,"stop","F8P K198*",2
"lib2","SARS-CoV-2","TGCTTAAGTGTCTAAA",11,62.74,9.46,-1.37,0.08,2.05,1,0,">1 nonsynonymous","P133T G152T V173A",3
"lib2","SARS-CoV-2","TGCTTAATATACGGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6N N13Y R25G Q84W P96F V103E E154H F167H",8
"lib2","SARS-CoV-2","TGCTTAATTTCTTACA",6,46.25,10.79,-0.04,0.04,2.91,1.11,0,"1 nonsynonymous","D97Q",1
"lib2","SARS-CoV-2","TGCTTACAATGTTTAA",7,49.33,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3R F17L T55F F70N N107E T140H",6
"lib2","SARS-CoV-2","TGCTTACCCAATGAAC",10,23.85,6.02,-4.82,1.04,1.86,1.21,0.01,">1 nonsynonymous","G83A V103N T148I F156S L187V",5
"lib2","SARS-CoV-2","TGCTTACCCGAATTTG",1,26.75,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C61G A89R S113K",3
"lib2","SARS-CoV-2","TGCTTACCGAAAAACT",14,106.57,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","K56V R73Y I88N T148V K198R",5
"lib2","SARS-CoV-2","TGCTTACGATTTGACT",5,44.97,10.16,-0.67,0.1,2.41,1.08,0.01,"1 nonsynonymous","V182T",1
"lib2","SARS-CoV-2","TGCTTACTTGTGAATA",1,12.9,9.03,-1.8,0.15,2.83,1.04,0,">1 nonsynonymous","Y39A Y143T K198M",3
"lib2","SARS-CoV-2","TGCTTAGAGAAGTTAG",1,34.57,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V11T N58F F62S I80L A192L",5
"lib2","SARS-CoV-2","TGCTTAGAGGATACGT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TGCTTAGCAAAATATT",3,44.54,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F8A Y91V N107T",3
"lib2","SARS-CoV-2","TGCTTAGTAAATATTG",2,12.15,8.54,-2.3,0.21,2.17,1.08,0.01,">1 nonsynonymous","N107G T170C",2
"lib2","SARS-CoV-2","TGCTTAGTATAACAAT",1,85.42,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N92M G155A Y165I N171E",4
"lib2","SARS-CoV-2","TGCTTATAACGCATAC",5,117.82,9.44,-1.39,0.06,1.84,1.09,0,">1 nonsynonymous","E10R N40I",2
"lib2","SARS-CoV-2","TGCTTATATTAAAACC",1,8.96,6.67,-4.16,0.17,1.5,1.03,0,">1 nonsynonymous","G9H A14R C158K",3
"lib2","SARS-CoV-2","TGCTTATGAACAACAA",1,4.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","TGCTTATTAATATATC",4,15.53,8.24,-2.59,0.2,1.93,1.02,0.02,">1 nonsynonymous","T55V I104T N171R",3
"lib2","SARS-CoV-2","TGCTTATTGTGCCTGA",4,7.17,NA,NA,NA,NA,NA,NA,"stop","G51* G86F",2
"lib2","SARS-CoV-2","TGCTTATTTAAGGGCA",4,25.84,9.69,-1.15,0.17,2.3,1.02,0.01,">1 nonsynonymous","F44L C102I",2
"lib2","SARS-CoV-2","TGCTTCAAAAACATTA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41I P96S V103W Q163P",4
"lib2","SARS-CoV-2","TGCTTCAAATACGGAG",10,105.54,7.66,-3.18,0.31,1.5,1.09,0.03,">1 nonsynonymous","P82S D90R",2
"lib2","SARS-CoV-2","TGCTTCAACATCATAT",10,0.41,NA,NA,NA,NA,NA,NA,"stop","V37M C61F L162*",3
"lib2","SARS-CoV-2","TGCTTCAGAGTAGAAA",5,47,10.08,-0.75,0.09,2.7,1.08,0,">1 nonsynonymous","I2M F8M I138G",3
"lib2","SARS-CoV-2","TGCTTCAGATAATATT",2,27.54,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","L60M G74I Y143D P149C",4
"lib2","SARS-CoV-2","TGCTTCAGCGGCACCT",2,22.33,10.62,-0.22,0.15,2.91,1.03,0.01,">1 nonsynonymous","G9V Y35M T148S",3
"lib2","SARS-CoV-2","TGCTTCAGTAACGAGA",7,9.3,NA,NA,NA,NA,NA,NA,"stop","V37*",1
"lib2","SARS-CoV-2","TGCTTCAGTCACAAGC",9,1.79,NA,NA,NA,NA,NA,NA,"stop","Y143* T170G",2
"lib2","SARS-CoV-2","TGCTTCATCTCCACAA",10,107.42,10.79,-0.05,0.05,2.87,1.13,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","TGCTTCCAAGTTAACA",8,274.2,10.54,-0.3,0.03,2.95,1.04,0,"1 nonsynonymous","A14E",1
"lib2","SARS-CoV-2","TGCTTCCCAAAGAACG",1,9.06,10.73,-0.11,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TGCTTCCCCAGAGAGA",15,6.18,NA,NA,NA,NA,NA,NA,"stop","S45N T55A R78D Y93* E141S",5
"lib2","SARS-CoV-2","TGCTTCCGGACTATCT",5,31.07,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","N4V I80V I88R",3
"lib2","SARS-CoV-2","TGCTTCCGGTGTGACA",6,25.07,7.28,-3.56,0.4,1.54,1.22,0.02,">1 nonsynonymous","T3K G86L",2
"lib2","SARS-CoV-2","TGCTTCGACACAAATC",3,20.65,6,-4.84,2,3,1.15,0.01,"1 nonsynonymous","V180P",1
"lib2","SARS-CoV-2","TGCTTCGCATGTTATA",3,22.41,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","I72Q S200K",2
"lib2","SARS-CoV-2","TGCTTCGGAACATCTG",7,44.81,9.61,-1.23,0.11,1.9,1.04,0,">1 nonsynonymous","Y66A A81C",2
"lib2","SARS-CoV-2","TGCTTCGTACACCCTA",1,11.31,10.48,-0.36,0.08,3,1.03,0,">1 nonsynonymous","L5M V52A",2
"lib2","SARS-CoV-2","TGCTTCTAATCCAACC",2,21.97,10.02,-0.82,0.12,2.55,1.01,0.01,">1 nonsynonymous","V37E L57D N64C T201F",4
"lib2","SARS-CoV-2","TGCTTCTGACGAACGC",2,5.79,NA,NA,NA,NA,NA,NA,"stop","G9Y D90* D97N R136G N157C",5
"lib2","SARS-CoV-2","TGCTTCTTGATAGTCT",10,134.69,10.8,-0.03,0.03,2.96,1.04,0,"1 nonsynonymous","G196S",1
"lib2","SARS-CoV-2","TGCTTGACCATATAAA",1,35.29,9.22,-1.61,0.39,1.5,1,0.07,">1 nonsynonymous","C6G A42P C49V",3
"lib2","SARS-CoV-2","TGCTTGATCCATTTCC",1,4.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49Y L183M",2
"lib2","SARS-CoV-2","TGCTTGGTCACTCGAA",7,300.3,10.33,-0.5,0.04,2.85,1.01,0,">1 nonsynonymous","T15V S36M",2
"lib2","SARS-CoV-2","TGCTTGTTAACGAAAA",15,1.74,NA,NA,NA,NA,NA,NA,"stop","G51* A89T Q168P",3
"lib2","SARS-CoV-2","TGCTTTAAATCTTGTT",12,192.79,10.89,0.05,0.05,2.95,1.06,0,"1 nonsynonymous","T100F",1
"lib2","SARS-CoV-2","TGCTTTACAAAGATTC",4,65.91,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","K56R A67I V103T K128N A145N F167T",6
"lib2","SARS-CoV-2","TGCTTTAGTTTAGATA",8,26.18,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13Y N30R V37Y Y50G I88S S129P",6
"lib2","SARS-CoV-2","TGCTTTATATCCCAAA",5,113.84,11.04,0.2,0.07,2.83,1.11,0,">1 nonsynonymous","L122K E154S S200P",3
"lib2","SARS-CoV-2","TGCTTTCAAAAATAAG",9,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S C61L G101D P197E",4
"lib2","SARS-CoV-2","TGCTTTCCCAGATTAT",2,33.73,6.68,-4.16,0.35,1.5,1.12,0.01,">1 nonsynonymous","G9V S113M Y121L",3
"lib2","SARS-CoV-2","TGCTTTCGAAATTTTG",2,9.53,7.42,-3.41,0.23,1.5,1.03,0.01,">1 nonsynonymous","L5N T100K N107R V115F Y178Q",5
"lib2","SARS-CoV-2","TGCTTTCGTAACGCGA",1,42.92,9.97,-0.86,0.07,2.59,1.11,0,">1 nonsynonymous","C6F C61M D97V",3
"lib2","SARS-CoV-2","TGCTTTGCCTAGAGGG",10,162.21,10.26,-0.58,0.05,2.82,1.11,0,">1 nonsynonymous","S36V T63L",2
"lib2","SARS-CoV-2","TGCTTTGGAGAACCCT",2,10.95,6,-4.84,2,1.5,1.1,0.05,">1 nonsynonymous","W23P I28T F70W",3
"lib2","SARS-CoV-2","TGCTTTGGTACATACA",4,32.56,8.78,-2.06,0.22,1.6,1.24,0.02,">1 nonsynonymous","V32W D59R N107R S129I N151H K199L",6
"lib2","SARS-CoV-2","TGCTTTTATAATTAAG",5,28.19,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I80N Q84Y Y119E Q144L K198V",5
"lib2","SARS-CoV-2","TGCTTTTCAAAAAATA",2,17.09,10.66,-0.17,0.09,3,1.05,0,">1 nonsynonymous","V37E L60K",2
"lib2","SARS-CoV-2","TGCTTTTTACCGATAG",2,33.12,10.66,-0.17,0.06,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAAAAAACATGTAA",3,11.07,11.2,0.36,0.09,3,1,0,"1 nonsynonymous","I142M",1
"lib2","SARS-CoV-2","TGGAAAAAGGATTGTA",9,12.1,6,-4.84,2,3,1.07,0.01,"1 nonsynonymous","L183P",1
"lib2","SARS-CoV-2","TGGAAAACTCCATTAC",2,15,10.84,0,0.1,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAAAACTGCCCGTA",4,79.26,10.79,-0.04,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAAAAGACTTACAG",4,100.07,8.05,-2.79,0.35,1.5,1,0.05,">1 nonsynonymous","G9R D68V",2
"lib2","SARS-CoV-2","TGGAAAAGAGAAGCAA",14,158.16,9.93,-0.91,0.04,2.89,1.1,0,">1 nonsynonymous","L122K Q168C",2
"lib2","SARS-CoV-2","TGGAAAAGATTAGATT",7,26.32,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","R124Y",1
"lib2","SARS-CoV-2","TGGAAAAGTAATGCAT",5,76.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38H K94Y V173S",3
"lib2","SARS-CoV-2","TGGAAAATGGAAGCAC",1,0.13,NA,NA,NA,NA,NA,NA,"stop","I2T L38* R78L E141V",4
"lib2","SARS-CoV-2","TGGAAACAAACATAAA",15,140.24,9.91,-0.93,0.04,2.08,1.01,0,"1 nonsynonymous","C49L",1
"lib2","SARS-CoV-2","TGGAAACCGAGTAAGT",9,50.27,6,-4.84,2,3,1.08,0,">1 nonsynonymous","I80M A89R K132I",3
"lib2","SARS-CoV-2","TGGAAACCGTCTGTAT",3,140.11,9.79,-1.04,0.04,2.97,1.06,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","TGGAAACCTGCTATTC",3,91.87,10.23,-0.61,0.05,2.91,1.04,0,">1 nonsynonymous","L57A P197T",2
"lib2","SARS-CoV-2","TGGAAACGGCAGTATC",4,105.5,10.2,-0.63,0.03,2.94,1.03,0,">1 nonsynonymous","D90S G155T",2
"lib2","SARS-CoV-2","TGGAAACTAACCATAA",1,53.37,6.91,-3.93,0.15,1.79,1.12,0,">1 nonsynonymous","S43T C150I K198S",3
"lib2","SARS-CoV-2","TGGAAACTGCTTACAG",11,11.32,NA,NA,NA,NA,NA,NA,"stop","C158*",1
"lib2","SARS-CoV-2","TGGAAAGAAGTTAAAG",8,4.46,NA,NA,NA,NA,NA,NA,"stop","N40M F44D A89Q P149* Y175V",5
"lib2","SARS-CoV-2","TGGAAAGAATAATCAC",3,100.87,9.45,-1.39,0.05,2.87,1.11,0,"1 nonsynonymous","Y143I",1
"lib2","SARS-CoV-2","TGGAAAGAGGAGGATA",2,81.21,10.42,-0.42,0.06,2.9,1.1,0,"1 nonsynonymous","G155E",1
"lib2","SARS-CoV-2","TGGAAAGATAGCTAAA",2,15.12,10.65,-0.19,0.07,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAAAGCATGCGGAT",3,44.71,6.49,-4.35,0.54,1.5,1.13,0.03,">1 nonsynonymous","Y66K L183Q",2
"lib2","SARS-CoV-2","TGGAAAGCGCTGAAAA",6,95.27,10.57,-0.27,0.05,2.93,1.06,0,"1 nonsynonymous","K94A",1
"lib2","SARS-CoV-2","TGGAAAGGCAAAAAAA",6,177.58,6.77,-4.07,0.07,2.1,1.11,0,"1 nonsynonymous","Y159E",1
"lib2","SARS-CoV-2","TGGAAAGTTGACTAAA",2,32.2,10.31,-0.53,0.03,2.9,1.11,0,"1 nonsynonymous","L125A",1
"lib2","SARS-CoV-2","TGGAAATAAAAAAAGG",1,27.56,10.02,-0.82,0.17,2.5,1,0.01,">1 nonsynonymous","N1C N30L T148V",3
"lib2","SARS-CoV-2","TGGAAATAACCGGTGC",13,5.42,NA,NA,NA,NA,NA,NA,"stop","G116D Y123*",2
"lib2","SARS-CoV-2","TGGAAATAAGGCTAGG",2,1.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R136H S200Y",2
"lib2","SARS-CoV-2","TGGAAATACCGGCGAC",9,31.2,10.1,-0.74,0.09,2.11,1.01,0,">1 nonsynonymous","I104S E141R",2
"lib2","SARS-CoV-2","TGGAAATACGTTTCAA",2,24.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99V P133L",2
"lib2","SARS-CoV-2","TGGAAATAGATTCGGT",1,49.46,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","N120R G146N G172Y",3
"lib2","SARS-CoV-2","TGGAAATAGTTCTGAC",1,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13S V37Y G83I D112V K128N I138L",6
"lib2","SARS-CoV-2","TGGAAATATAAACTCA",2,1.05,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I104S",1
"lib2","SARS-CoV-2","TGGAAATATAATTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45I Y123V V173N S200W",4
"lib2","SARS-CoV-2","TGGAAATCCAGTGAGA",6,121.5,10.43,-0.41,0.04,2.99,1.03,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","TGGAAATGGAGAATTC",2,7.45,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","F62S L131R F167S",3
"lib2","SARS-CoV-2","TGGAAATGTTAGACGG",6,75.4,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","G86I",1
"lib2","SARS-CoV-2","TGGAAATGTTTTGGCA",5,0.26,NA,NA,NA,NA,NA,NA,"stop","L131*",1
"lib2","SARS-CoV-2","TGGAAATTAAACGAAA",4,67.33,9.93,-0.91,0.1,2.27,1.04,0,"1 nonsynonymous","V77A",1
"lib2","SARS-CoV-2","TGGAAATTACCATAAG",6,38.27,8.35,-2.48,0.14,2.62,1.05,0.01,">1 nonsynonymous","V115N E135A Y175N",3
"lib2","SARS-CoV-2","TGGAACAAAGTGTCAC",4,36.53,10.06,-0.78,0.05,3,1.03,0,">1 nonsynonymous","N1E T170M",2
"lib2","SARS-CoV-2","TGGAACAACACGAGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","V153* S164L",2
"lib2","SARS-CoV-2","TGGAACAAGACACATC",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G G74H G83C",3
"lib2","SARS-CoV-2","TGGAACAAGCTCCGAT",4,31.07,10.02,-0.81,0.14,2.13,1.04,0.01,">1 nonsynonymous","A14S P54H W106M K199M",4
"lib2","SARS-CoV-2","TGGAACAATGAATTCC",2,6.28,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","C61Y W106L G155V",3
"lib2","SARS-CoV-2","TGGAACACAACTTGGG",3,36.08,10.67,-0.17,0.05,2.92,1.07,0,">1 nonsynonymous","S29F C61E",2
"lib2","SARS-CoV-2","TGGAACATCAAACTAA",2,9.69,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","G51Y C61N V103L P191D",4
"lib2","SARS-CoV-2","TGGAACATTTTTCGTA",1,19.47,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F44P G86V",2
"lib2","SARS-CoV-2","TGGAACCAACCTCAGA",14,358.41,9.92,-0.92,0.06,2.14,1.01,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TGGAACCACTTAAAAA",2,0.66,NA,NA,NA,NA,NA,NA,"stop","C150* T201Q",2
"lib2","SARS-CoV-2","TGGAACCGACTCAATT",10,143.33,10.7,-0.14,0.02,2.93,1.06,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","TGGAACCGCCTCATTA",4,29.86,6.8,-4.04,0.38,1.5,1.18,0.04,">1 nonsynonymous","P96F N110I S139T",3
"lib2","SARS-CoV-2","TGGAACCGTTTATTCC",2,1.47,NA,NA,NA,NA,NA,NA,"stop","L38Y A42S I72W F99W E154*",5
"lib2","SARS-CoV-2","TGGAACCTCGCACCAA",3,104.43,10.71,-0.13,0.03,2.96,1.06,0,"1 nonsynonymous","F8M",1
"lib2","SARS-CoV-2","TGGAACCTCTCTAACT",6,8.78,NA,NA,NA,NA,NA,NA,"stop","N4T D59A Y91*",3
"lib2","SARS-CoV-2","TGGAACGAGTACAGAT",1,16.34,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3L Y66G I72K K87Q N120T G146H Q176R",7
"lib2","SARS-CoV-2","TGGAACGAGTAGATGG",2,24.23,10.17,-0.66,0.1,2.63,1,0,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","TGGAACGATGACTAAT",5,80.29,10.72,-0.11,0.06,2.92,1.1,0,">1 nonsynonymous","L5F T55Y",2
"lib2","SARS-CoV-2","TGGAACGGCTGCACCA",1,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44C E135L",2
"lib2","SARS-CoV-2","TGGAACGGTGTATCGA",20,4.73,NA,NA,NA,NA,NA,NA,"stop","S19E S41D T63I D137*",4
"lib2","SARS-CoV-2","TGGAACGTTCTCTACC",6,11.52,6,-4.84,2,1.5,1.06,0.02,">1 nonsynonymous","R16S G86V L95W",3
"lib2","SARS-CoV-2","TGGAACGTTTAGTAAT",2,31.7,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V11F S147C Y165A",3
"lib2","SARS-CoV-2","TGGAACTACATGAGCT",2,34.15,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y39A I88K D137L V173L",4
"lib2","SARS-CoV-2","TGGAACTAGCTGTATG",1,0.03,NA,NA,NA,NA,NA,NA,"stop","Y159* P197F",2
"lib2","SARS-CoV-2","TGGAACTCAAATATAA",20,130.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L R27W F62D Y123T",4
"lib2","SARS-CoV-2","TGGAACTCTAGAAACC",5,102.3,10.65,-0.19,0.03,2.97,1.05,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","TGGAACTGTCTGAGAT",8,125.62,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G86K N107K Y119R F160P K199T",5
"lib2","SARS-CoV-2","TGGAACTGTGGTGAGG",3,5.98,9.67,-1.16,0.41,2.41,1.01,0.02,">1 nonsynonymous","V20P F134T",2
"lib2","SARS-CoV-2","TGGAACTGTTTAGCTG",21,154.92,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","K94L T100Y P177G T201M",4
"lib2","SARS-CoV-2","TGGAACTTTTCTATAG",6,120.78,10.39,-0.44,0.04,2.9,1.08,0,">1 nonsynonymous","F62L K87M",2
"lib2","SARS-CoV-2","TGGAAGAAAGATACTG",4,68.78,7.92,-2.91,0.11,1.79,1.1,0.01,">1 nonsynonymous","C31R T140G P149Q F156W",4
"lib2","SARS-CoV-2","TGGAAGAAATACAATA",3,27.35,9.15,-1.69,0.15,1.94,1.12,0.01,">1 nonsynonymous","T85S Y165N K198R",3
"lib2","SARS-CoV-2","TGGAAGACAATCCTCA",5,49.04,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K48T P82I I88L S113P R124F",5
"lib2","SARS-CoV-2","TGGAAGAGCAAATTCG",7,70.54,9.53,-1.31,0.06,2.14,1.04,0,">1 nonsynonymous","L5V S19R K56R",3
"lib2","SARS-CoV-2","TGGAAGATAAATTGCA",3,60.54,10.11,-0.73,0.09,2.68,1.04,0,">1 nonsynonymous","C31G T55Y",2
"lib2","SARS-CoV-2","TGGAAGATAGAACCTT",8,2.14,NA,NA,NA,NA,NA,NA,"stop","S43* G155L T193I",3
"lib2","SARS-CoV-2","TGGAAGCGCAATATTG",2,14.93,10.2,-0.64,0.21,2.37,1.32,0.03,"1 nonsynonymous","S19N",1
"lib2","SARS-CoV-2","TGGAAGGATCTATATA",5,84.35,8.78,-2.06,0.08,2.67,1.05,0,">1 nonsynonymous","D90M S113C",2
"lib2","SARS-CoV-2","TGGAAGGCCAGGGATG",1,1.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68N P133D",2
"lib2","SARS-CoV-2","TGGAAGGGTAACTGGC",1,51.38,8.9,-1.93,0.12,2.44,1.14,0.01,">1 nonsynonymous","I142T Q176M",2
"lib2","SARS-CoV-2","TGGAAGGGTTTAACTA",2,14.09,8.82,-2.02,0.06,3,1.07,0,">1 nonsynonymous","V37T K87I G166M",3
"lib2","SARS-CoV-2","TGGAAGTAAGTTAAAA",1,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106T C158N S200I",3
"lib2","SARS-CoV-2","TGGAAGTACGGAATAT",5,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49G Y93D G101Q N130G P161K T170S V180T F185M",8
"lib2","SARS-CoV-2","TGGAAGTAGGCGAGTC",8,105.9,7.47,-3.37,0.11,1.59,1.1,0,">1 nonsynonymous","F167H A190S",2
"lib2","SARS-CoV-2","TGGAAGTCCTTCATAG",1,0,NA,NA,NA,NA,NA,NA,"stop","A14* Y175K",2
"lib2","SARS-CoV-2","TGGAAGTGAAATGTGA",1,19.52,10.73,-0.11,0.04,3,1.01,0,">1 nonsynonymous","Y35L K87H",2
"lib2","SARS-CoV-2","TGGAAGTGTATGAGAA",7,195.59,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2G V65K S69L P82S I88Y N120T",6
"lib2","SARS-CoV-2","TGGAAGTGTTCAAATG",11,31.72,9.09,-1.74,0.23,1.51,1.11,0.03,">1 nonsynonymous","F44I A89Y Y123L",3
"lib2","SARS-CoV-2","TGGAATAAACAAAACG",4,65.07,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L60S N92P G116W T201P",4
"lib2","SARS-CoV-2","TGGAATAAAGATTGCC",5,1.72,NA,NA,NA,NA,NA,NA,"stop","K56F P133*",2
"lib2","SARS-CoV-2","TGGAATAAATCAGTTT",3,76.57,10.24,-0.59,0.03,2.96,1.06,0,">1 nonsynonymous","T63D F156L",2
"lib2","SARS-CoV-2","TGGAATAAGCTGTAGA",1,10.3,10.71,-0.12,0.08,3,1,0,"1 nonsynonymous","S129R",1
"lib2","SARS-CoV-2","TGGAATAAGGGCTGGG",1,12.65,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","R27W D68M V103W G152L Q168P V180C",6
"lib2","SARS-CoV-2","TGGAATAATAAAACAA",4,54.41,10.88,0.04,0.07,2.93,1.09,0,"1 nonsynonymous","T63S",1
"lib2","SARS-CoV-2","TGGAATACAAATGGTC",5,42.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","C102L G116Y G174F",3
"lib2","SARS-CoV-2","TGGAATACAAGCAAAA",6,80.89,10.36,-0.47,0.04,2.88,1.06,0,">1 nonsynonymous","K56Q W106Y Q163T",3
"lib2","SARS-CoV-2","TGGAATACCTCACACA",7,73.42,10.36,-0.47,0.05,2.93,1.08,0,"1 nonsynonymous","A145I",1
"lib2","SARS-CoV-2","TGGAATACTTTGATTC",1,8.83,6.53,-4.31,1.99,1.5,1.19,0.02,">1 nonsynonymous","W23R F99L V173Q",3
"lib2","SARS-CoV-2","TGGAATAGCATAAGGT",9,83.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y91F K114L R127F N151G K199R",5
"lib2","SARS-CoV-2","TGGAATAGTTATAGTT",5,0,NA,NA,NA,NA,NA,NA,"stop","T3R A33*",2
"lib2","SARS-CoV-2","TGGAATATCAACATAC",1,3.45,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","TGGAATATGCGTGTAT",1,0,NA,NA,NA,NA,NA,NA,"stop","G86Y D90F L122* R136Q V173F",5
"lib2","SARS-CoV-2","TGGAATATTGTTTTCT",7,145.3,10.81,-0.03,0.04,2.92,1.11,0,"1 nonsynonymous","T201K",1
"lib2","SARS-CoV-2","TGGAATCCATAATACA",4,120.74,8.52,-2.32,0.09,2.97,1.03,0,">1 nonsynonymous","T170C G174S",2
"lib2","SARS-CoV-2","TGGAATCCTAGAAAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","A14*",1
"lib2","SARS-CoV-2","TGGAATCCTTTCTTCC",4,57,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F44H C49S L60I",3
"lib2","SARS-CoV-2","TGGAATCGTACTGGGC",3,22.81,8.48,-2.36,0.28,1.5,1,0.03,">1 nonsynonymous","W23S V32S N64D",3
"lib2","SARS-CoV-2","TGGAATCTAAGTTATG",8,118.18,6.07,-4.77,0.66,1.5,1.16,0.01,">1 nonsynonymous","P82N S147P Q176L",3
"lib2","SARS-CoV-2","TGGAATCTGAACAGAA",8,84.72,10.21,-0.62,0.05,2.81,1.04,0,">1 nonsynonymous","F44T D59A",2
"lib2","SARS-CoV-2","TGGAATCTTAGTGGCT",14,160.6,10.11,-0.73,0.05,2.69,1.02,0,">1 nonsynonymous","G9P F47T",2
"lib2","SARS-CoV-2","TGGAATGAAAAGTTAT",5,32.95,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","D98T N110L K132N P161F",4
"lib2","SARS-CoV-2","TGGAATGAATCAAAAC",10,160.26,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40F P177F",2
"lib2","SARS-CoV-2","TGGAATGCTACAGACC",10,145.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D75Y D90V W106T S129N",4
"lib2","SARS-CoV-2","TGGAATGTAATACCGG",18,3.28,NA,NA,NA,NA,NA,NA,"stop","Q84* A105Y",2
"lib2","SARS-CoV-2","TGGAATGTCAACCTTA",6,54.49,6,-4.84,2,1.5,1.18,0.02,"1 nonsynonymous","G101S",1
"lib2","SARS-CoV-2","TGGAATGTGACGGACC",3,192.9,8.13,-2.71,0.1,2.09,1.09,0,">1 nonsynonymous","G117Y A145R",2
"lib2","SARS-CoV-2","TGGAATGTTACATGAT",3,0.74,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","TGGAATTAAATGAACG",16,6.16,NA,NA,NA,NA,NA,NA,"stop","T46M K87L L95A L131*",4
"lib2","SARS-CoV-2","TGGAATTATGAAATTA",6,0.76,NA,NA,NA,NA,NA,NA,"stop","S19E S36A I104* G117Q Q168H",5
"lib2","SARS-CoV-2","TGGAATTATGTAGTTA",4,63.87,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y39S D98V V103M Y143I",4
"lib2","SARS-CoV-2","TGGAATTGTACTACAT",6,28.26,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G86W W106S",2
"lib2","SARS-CoV-2","TGGACAAAACACTTTT",10,1982.69,10.8,-0.04,0.04,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGACAAAATGCTTCA",3,0,NA,NA,NA,NA,NA,NA,"stop","I80F T100H F134*",3
"lib2","SARS-CoV-2","TGGACAAACAGGCACA",14,4.33,NA,NA,NA,NA,NA,NA,"stop","W106* Y119C",2
"lib2","SARS-CoV-2","TGGACAAACCTCCAAT",4,0,NA,NA,NA,NA,NA,NA,"stop","C61* K199N",2
"lib2","SARS-CoV-2","TGGACAAATTAACGAA",1,28.69,7.65,-3.19,0.14,2.08,1.13,0,">1 nonsynonymous","F156L P177C",2
"lib2","SARS-CoV-2","TGGACAACCAAACGCC",1,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y G83K T201L",3
"lib2","SARS-CoV-2","TGGACAACCACTAGTT",1,0.28,NA,NA,NA,NA,NA,NA,"stop","A18* Y35L L57D Y143T",4
"lib2","SARS-CoV-2","TGGACAACTTAAAGAC",15,264.85,9.56,-1.27,0.02,2.92,1.07,0,">1 nonsynonymous","T148I T170R",2
"lib2","SARS-CoV-2","TGGACAAGAAACAATA",3,20.94,10.78,-0.06,0.06,3,1.01,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","TGGACAAGACTTTGTT",2,29.33,9.65,-1.18,0.12,2.08,1.01,0.01,"1 nonsynonymous","C49M",1
"lib2","SARS-CoV-2","TGGACAATAAATGCCA",2,4.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7H C49R N109Y G116K L125R",5
"lib2","SARS-CoV-2","TGGACAATATATCCGC",2,0,NA,NA,NA,NA,NA,NA,"stop","N13G I88*",2
"lib2","SARS-CoV-2","TGGACAATATTCAATT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F8G",1
"lib2","SARS-CoV-2","TGGACACAAAGATGTT",4,85.27,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R25Y N40L S45H Y119N",4
"lib2","SARS-CoV-2","TGGACACCGTTCGAAT",11,221.43,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C31L C61R C150D",3
"lib2","SARS-CoV-2","TGGACACGACTATATA",5,83.62,10.88,0.04,0.06,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGACACGATATAGTA",2,65.49,10.35,-0.49,0.04,2.94,1.09,0,">1 nonsynonymous","S41L C61K V115M",3
"lib2","SARS-CoV-2","TGGACACGCCCTATTA",5,47.16,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","P82L A105P S113K R136G G155H Y175F",6
"lib2","SARS-CoV-2","TGGACACGGTACGTAG",2,74.11,9.93,-0.91,0.08,2.55,1.18,0,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","TGGACACGTTATTACG",6,33.99,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","R25L S36H P96I G116T P133E L162Q",6
"lib2","SARS-CoV-2","TGGACACTAATTTCTT",10,2.01,NA,NA,NA,NA,NA,NA,"stop","G74P T201*",2
"lib2","SARS-CoV-2","TGGACACTACGCATCC",1,47.6,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36N Q176P",2
"lib2","SARS-CoV-2","TGGACACTATAAACCA",1,21.02,9.64,-1.19,0.14,1.87,1.14,0,"1 nonsynonymous","S69K",1
"lib2","SARS-CoV-2","TGGACACTATATTTAT",6,31.12,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","V71K Y123R",2
"lib2","SARS-CoV-2","TGGACACTCCTGAGAT",6,3.93,NA,NA,NA,NA,NA,NA,"stop","Y39L I88S D97N L111*",4
"lib2","SARS-CoV-2","TGGACACTTAGAACAT",5,129.8,10.66,-0.17,0.03,2.96,1.05,0,"1 nonsynonymous","A81S",1
"lib2","SARS-CoV-2","TGGACACTTATCTGCG",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47R Q84T D98F",3
"lib2","SARS-CoV-2","TGGACAGAACACTTTT",8,141.83,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","Y50I A145V G155Y Q176N T201R",5
"lib2","SARS-CoV-2","TGGACAGGCCAACTAA",5,13.38,6,-4.84,2,1.5,1.23,0.06,">1 nonsynonymous","K94M W106D D112W P161S Q168L",5
"lib2","SARS-CoV-2","TGGACAGTAAGGAGAC",3,24.92,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E10Y V77K G83R Q168T G174M",5
"lib2","SARS-CoV-2","TGGACAGTCCAATAGT",6,17.28,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","T15V I72K E186Y",3
"lib2","SARS-CoV-2","TGGACATAAACCCTTT",3,40.48,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","K56T I72N A89S R127L C195F",5
"lib2","SARS-CoV-2","TGGACATAGATTGAGA",2,35.62,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V103L K128S L162A",3
"lib2","SARS-CoV-2","TGGACATCAAAAGGCA",2,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49S N107S L162G",3
"lib2","SARS-CoV-2","TGGACATCGGTAGGAC",15,106.86,10.83,-0.01,0.04,2.97,1.04,0,"1 nonsynonymous","K132L",1
"lib2","SARS-CoV-2","TGGACATCTACATGTA",6,163.53,10.63,-0.21,0.03,2.89,1.1,0,"1 nonsynonymous","F185Y",1
"lib2","SARS-CoV-2","TGGACATTAACTCAGA",12,147.04,10.38,-0.45,0.04,2.9,1.06,0,">1 nonsynonymous","A89S P149T A190N",3
"lib2","SARS-CoV-2","TGGACATTTGCCACGA",2,25.14,10.75,-0.09,0.05,3,1,0,">1 nonsynonymous","L5C I138D",2
"lib2","SARS-CoV-2","TGGACCAATAGGCCTT",1,0.67,NA,NA,NA,NA,NA,NA,"stop","F156*",1
"lib2","SARS-CoV-2","TGGACCACCTTGTAAT",8,40.78,8.32,-2.52,0.22,1.5,1.09,0.03,">1 nonsynonymous","K132A S139F G174Y",3
"lib2","SARS-CoV-2","TGGACCAGTCAGATAG",11,35.26,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","P7N I72G V103S K114P",4
"lib2","SARS-CoV-2","TGGACCCAATCCGAGT",2,72.99,10.67,-0.17,0.03,2.94,1.05,0,">1 nonsynonymous","C61H D97I Y175W L187R A190D",5
"lib2","SARS-CoV-2","TGGACCCCTAAAATTG",6,80.98,8.75,-2.09,0.11,2.63,1.12,0,">1 nonsynonymous","G117M S129F S147Q",3
"lib2","SARS-CoV-2","TGGACCCCTCATAATG",17,136.03,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G9V C61N A81E F99S S139C",5
"lib2","SARS-CoV-2","TGGACCCCTGATTCGT",3,41.07,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","K56G A105L D137A I142R Y178S",5
"lib2","SARS-CoV-2","TGGACCCGAAAAGGTC",1,43.15,10.28,-0.56,0.05,2.84,1.09,0,">1 nonsynonymous","T3I T55N S184K",3
"lib2","SARS-CoV-2","TGGACCGACCATTACA",1,10.24,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C6F W106G G116V",3
"lib2","SARS-CoV-2","TGGACCGTAAATAATA",5,79.71,10.82,-0.01,0.04,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGACCTAGTCAAAAC",9,87.44,9.62,-1.21,0.05,2.81,1.02,0,">1 nonsynonymous","S41A G155F",2
"lib2","SARS-CoV-2","TGGACCTAGTCCGACT",1,25.56,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","V11T W106P N120W F156N E186A",5
"lib2","SARS-CoV-2","TGGACCTTAGAAAATG",2,62.38,9.29,-1.55,0.07,2.28,1.08,0,">1 nonsynonymous","D90E G155I",2
"lib2","SARS-CoV-2","TGGACCTTATAACAAT",8,5.22,NA,NA,NA,NA,NA,NA,"stop","F17* R124F F134Y Q168* Y178K P197*",6
"lib2","SARS-CoV-2","TGGACCTTTTAGCACC",1,5.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49V G86R F160T",3
"lib2","SARS-CoV-2","TGGACGACTAACCGAC",18,265.58,10.81,-0.03,0.03,2.91,1.09,0,"1 nonsynonymous","V37N",1
"lib2","SARS-CoV-2","TGGACGACTGTAACCG",6,22.18,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","C61S G101Y",2
"lib2","SARS-CoV-2","TGGACGCCAAAGATAT",3,22.79,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F17S R27Q S139I G155V R179K S200H",6
"lib2","SARS-CoV-2","TGGACGCCCATTGAAT",4,71.64,10.86,0.03,0.05,2.98,1.05,0,"1 nonsynonymous","T201S",1
"lib2","SARS-CoV-2","TGGACGCTAATGCAAT",3,17.21,9.35,-1.49,0.32,1.5,1.03,0.04,">1 nonsynonymous","C49Y S129M",2
"lib2","SARS-CoV-2","TGGACGGACATTGTTC",3,153.34,10.28,-0.55,0.03,2.91,1.06,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","TGGACGGTGGCACCAG",5,0.37,NA,NA,NA,NA,NA,NA,"stop","K48Y I72N A81Q V181*",4
"lib2","SARS-CoV-2","TGGACTACGGCATTGC",7,91.42,8.77,-2.07,0.1,1.98,1.1,0,">1 nonsynonymous","D90L Q144G G155R",3
"lib2","SARS-CoV-2","TGGACTAGAAAATCCC",8,143.7,6.42,-4.42,0.62,1.5,1.23,0.03,">1 nonsynonymous","V77M A81L L122A E135M",4
"lib2","SARS-CoV-2","TGGACTCAATCCGAGA",12,140.3,8.68,-2.15,0.08,2.83,1.08,0,">1 nonsynonymous","A14S V37H G174I",3
"lib2","SARS-CoV-2","TGGACTCGGTGAATAT",2,27.19,6.15,-4.69,1.19,1.5,1.13,0.06,">1 nonsynonymous","G9N T46R C158R T201W",4
"lib2","SARS-CoV-2","TGGACTGACAGCGAAA",4,119.75,10.62,-0.22,0.04,2.91,1.01,0,">1 nonsynonymous","T100A A190L",2
"lib2","SARS-CoV-2","TGGACTGACCAATTGC",3,3.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23V S129P R136V",3
"lib2","SARS-CoV-2","TGGACTGCAGATTCTC",3,22.55,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12Q Y143S K198T",3
"lib2","SARS-CoV-2","TGGACTGGCTTAAAAG",4,87.62,10.38,-0.45,0.04,2.9,1.07,0,">1 nonsynonymous","D34L K56D Y66T",3
"lib2","SARS-CoV-2","TGGACTTAATGTGCGA",4,106.21,10.72,-0.12,0.09,2.85,1.16,0,"1 nonsynonymous","R27T",1
"lib2","SARS-CoV-2","TGGACTTATATTTTAA",3,34.89,10.8,-0.03,0.06,2.96,1.08,0,"1 nonsynonymous","Q168R",1
"lib2","SARS-CoV-2","TGGAGAAAACTATTGC",2,40.04,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D75E P82F D98N T100N",4
"lib2","SARS-CoV-2","TGGAGAAACTAATTTG",5,93.2,10.69,-0.14,0.02,2.97,1.04,0,">1 nonsynonymous","T63K Y123M",2
"lib2","SARS-CoV-2","TGGAGAAAGCAACCAC",3,20.7,8.94,-1.89,0.1,2.79,1.07,0,">1 nonsynonymous","L5E S113V",2
"lib2","SARS-CoV-2","TGGAGAAAGTATAAAG",12,68.6,6.05,-4.79,0.73,1.69,1.14,0.01,">1 nonsynonymous","K48G G86V",2
"lib2","SARS-CoV-2","TGGAGAAATTGTGGGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S T55V L60I Y66T V115M F160H",6
"lib2","SARS-CoV-2","TGGAGAACTAGAACAA",1,20.01,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","V52R I138L A145W P149N F156V V173R",6
"lib2","SARS-CoV-2","TGGAGAAGTTCTGGAT",1,23.56,6.32,-4.52,0.75,1.5,1.19,0.05,">1 nonsynonymous","P96F F126V I138L",3
"lib2","SARS-CoV-2","TGGAGAATCCTCCATA",16,332.95,10.58,-0.26,0.02,2.94,1.05,0,">1 nonsynonymous","T55N D90C",2
"lib2","SARS-CoV-2","TGGAGAATGTGCCGTA",1,51.31,10.43,-0.4,0.05,2.85,1.07,0,">1 nonsynonymous","S41P P149L",2
"lib2","SARS-CoV-2","TGGAGACACAGGTGAA",11,76.07,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R27S F62N D112I S139M F156S",5
"lib2","SARS-CoV-2","TGGAGACTTGGATAGA",6,7.14,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","N13S P54R G74F G83A C102W",5
"lib2","SARS-CoV-2","TGGAGAGAAAATGCGA",2,95.02,10.82,-0.01,0.06,2.98,1.05,0,">1 nonsynonymous","I2L V37T",2
"lib2","SARS-CoV-2","TGGAGAGGGATTAGCG",6,48.02,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S29R F44T P96E",3
"lib2","SARS-CoV-2","TGGAGAGTAATAAAAA",1,15.01,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","N92M T100W N107W",3
"lib2","SARS-CoV-2","TGGAGAGTACGTGAAA",4,154.38,10.7,-0.14,0.05,2.93,1.07,0,">1 nonsynonymous","A42T H189S",2
"lib2","SARS-CoV-2","TGGAGATAAAGTCGGA",2,0.55,NA,NA,NA,NA,NA,NA,"stop","L60P G83V D137M K198*",4
"lib2","SARS-CoV-2","TGGAGATAGGTTCGAA",1,121.3,10.85,0.02,0.03,2.96,1.04,0,">1 nonsynonymous","I2H G9S",2
"lib2","SARS-CoV-2","TGGAGATCCACTGCAT",2,0.22,NA,NA,NA,NA,NA,NA,"stop","N107V R136D T201*",3
"lib2","SARS-CoV-2","TGGAGATGATCCACCC",12,76.48,6.21,-4.62,0.74,1.5,1.23,0.02,">1 nonsynonymous","N4L A14H G51W C150H P161V T170K S184I",7
"lib2","SARS-CoV-2","TGGAGATTAGAAGACA",6,98.93,10.49,-0.35,0.05,2.95,1.02,0,"1 nonsynonymous","F44Q",1
"lib2","SARS-CoV-2","TGGAGCATCCCCAACC",5,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V N13V D112R P149F V153K",5
"lib2","SARS-CoV-2","TGGAGCATGTAATGGC",3,31.51,10.99,0.15,0.07,2.99,1,0,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","TGGAGCCTACATACTT",10,44.81,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C49G D98V A105M S139F G174E",5
"lib2","SARS-CoV-2","TGGAGCCTGGCTATTG",14,336.26,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G9A D90V E141L Q176G",4
"lib2","SARS-CoV-2","TGGAGCTACTGGGTTA",1,11.92,6,-4.84,2,1.5,1.21,0.06,">1 nonsynonymous","A89L S164G",2
"lib2","SARS-CoV-2","TGGAGCTGGTGAACTA",10,254.12,10.85,0.01,0.06,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAGCTTCGAGCCAC",12,146.87,9.82,-1.02,0.05,2.36,1.04,0,">1 nonsynonymous","I2F D97H A105S Q144R P149R",5
"lib2","SARS-CoV-2","TGGAGCTTGCTACGTA",10,18.82,NA,NA,NA,NA,NA,NA,"stop","G9R C61* D90S",3
"lib2","SARS-CoV-2","TGGAGGAAAACATAAT",1,38.48,10.71,-0.12,0.06,2.87,1.1,0,">1 nonsynonymous","A42Y T55P",2
"lib2","SARS-CoV-2","TGGAGGAACTCTCTCT",3,63.1,10.62,-0.21,0.05,2.83,1.15,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","TGGAGGAAGCTTAGCA",6,63.8,9.88,-0.96,0.06,2.03,1.02,0,">1 nonsynonymous","K48A I104H",2
"lib2","SARS-CoV-2","TGGAGGAATGTAATTC",18,4.57,NA,NA,NA,NA,NA,NA,"stop","L5* K87S D112T",3
"lib2","SARS-CoV-2","TGGAGGCAGACCCATT",3,28.85,10.87,0.03,0.09,2.85,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGAGGCTGGTAACTG",6,18.41,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G74S D90L V103W",3
"lib2","SARS-CoV-2","TGGAGGTCATAAAGCC",3,116.55,9.22,-1.61,0.08,2.41,1.07,0,">1 nonsynonymous","R27A K56V S164I",3
"lib2","SARS-CoV-2","TGGAGGTCTCATTTAA",1,38.4,8.76,-2.07,0.07,1.86,1.07,0,">1 nonsynonymous","K56S D137Y",2
"lib2","SARS-CoV-2","TGGAGGTTCATATCCA",7,2.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V K48V V65D C158D S200R",5
"lib2","SARS-CoV-2","TGGAGTAAACGCACTT",2,11.51,8.37,-2.46,0.25,3,1.08,0.03,">1 nonsynonymous","N40P S113M P197T",3
"lib2","SARS-CoV-2","TGGAGTAAAGTAGAAA",3,51.26,10.82,-0.02,0.07,2.86,1.15,0,">1 nonsynonymous","S36T T55L S129R I138M",4
"lib2","SARS-CoV-2","TGGAGTAAGGCACTGT",2,31.86,9.01,-1.83,0.27,1.5,1,0.03,">1 nonsynonymous","S41R Y50S",2
"lib2","SARS-CoV-2","TGGAGTACCTCACTAA",6,59.45,9.51,-1.33,0.16,2.2,1.14,0.01,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","TGGAGTAGCTTGAAAA",1,43.59,10.09,-0.75,0.09,2.61,1.11,0,">1 nonsynonymous","N13Y P54H",2
"lib2","SARS-CoV-2","TGGAGTATAAATGATA",8,79.66,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F8N A14N P149V Y165T T201I",5
"lib2","SARS-CoV-2","TGGAGTATAATGGCAC",5,74.69,10.74,-0.1,0.08,2.89,1.1,0,">1 nonsynonymous","K56L G152D",2
"lib2","SARS-CoV-2","TGGAGTATGCCAAAGT",3,0.47,NA,NA,NA,NA,NA,NA,"stop","P7* S45N N151K",3
"lib2","SARS-CoV-2","TGGAGTATTGCGGGTG",1,0.05,NA,NA,NA,NA,NA,NA,"stop","S53P L60F S200*",3
"lib2","SARS-CoV-2","TGGAGTCAATCCAGTA",7,65.6,8.54,-2.3,0.24,1.5,1,0.02,">1 nonsynonymous","D68M D97R K128S",3
"lib2","SARS-CoV-2","TGGAGTCACAAAAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N107Y N120* Q144V Y178H",4
"lib2","SARS-CoV-2","TGGAGTCTGCACATGG",13,136.13,8.9,-1.94,0.09,1.5,1.05,0,">1 nonsynonymous","N24I L38K",2
"lib2","SARS-CoV-2","TGGAGTGAACGAAATC",5,33.88,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","L57K Y66V Y91R G117I Y159F",5
"lib2","SARS-CoV-2","TGGAGTGAGAAATAAA",8,0.24,NA,NA,NA,NA,NA,NA,"stop","T3P W23G Y39L T46C Y91H F99L N118* G152H",8
"lib2","SARS-CoV-2","TGGAGTGGGATAACGT",3,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y C49L",2
"lib2","SARS-CoV-2","TGGAGTTAAGGTCACA",10,11.75,NA,NA,NA,NA,NA,NA,"stop","G86V N130*",2
"lib2","SARS-CoV-2","TGGAGTTACACACTAA",7,114.72,9.99,-0.84,0.06,2.1,1.01,0,">1 nonsynonymous","P7T W106R",2
"lib2","SARS-CoV-2","TGGAGTTGAGTTCAAA",18,119.55,7.88,-2.96,0.23,1.5,1.12,0.02,">1 nonsynonymous","G9T G86Y D90R",3
"lib2","SARS-CoV-2","TGGAGTTGCTAGCGAA",4,54.62,8.55,-2.29,0.04,2.74,1.04,0,">1 nonsynonymous","C102I L125T G155E",3
"lib2","SARS-CoV-2","TGGATAAAAAATAATA",3,0,NA,NA,NA,NA,NA,NA,"stop","C31T Y50D D112* Y178V",4
"lib2","SARS-CoV-2","TGGATAAAACGTATCG",3,25.67,9.75,-1.08,0.1,2.63,1.04,0,">1 nonsynonymous","C6P N151S",2
"lib2","SARS-CoV-2","TGGATAAAATAGCCTG",7,63.97,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P96D S129I T140H Y165P",4
"lib2","SARS-CoV-2","TGGATAAAGGTAGTGC",3,96.61,9.85,-0.99,0.07,2.62,1.1,0,">1 nonsynonymous","Y123A F185Y",2
"lib2","SARS-CoV-2","TGGATAAATACAGTGC",4,0.63,NA,NA,NA,NA,NA,NA,"stop","Y35L S43D L60* G101R I138L",5
"lib2","SARS-CoV-2","TGGATAAATCCATGTG",7,44.84,10.21,-0.63,0.06,2.91,1.05,0,">1 nonsynonymous","S41W S53I F126M",3
"lib2","SARS-CoV-2","TGGATAAGATTGTAAT",11,103.96,10.09,-0.74,0.02,2.94,1.07,0,">1 nonsynonymous","N130Q F156S L188R",3
"lib2","SARS-CoV-2","TGGATAATCAAGCTAA",2,47.59,10.28,-0.56,0.05,2.89,1.11,0,">1 nonsynonymous","P149S G174L",2
"lib2","SARS-CoV-2","TGGATAATCGTGGCAG",6,48.96,10.85,0.02,0.07,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATAATTCTCTATT",2,0.57,NA,NA,NA,NA,NA,NA,"stop","Y143N Y178* S184G T201K",4
"lib2","SARS-CoV-2","TGGATACAGCCCCTTA",4,23.62,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","C6S F44W D68L Q144V",4
"lib2","SARS-CoV-2","TGGATACAGTGATTAT",9,3.52,NA,NA,NA,NA,NA,NA,"stop","T15M S36L D59* A81L",4
"lib2","SARS-CoV-2","TGGATACGCACACAAA",5,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T D112S",2
"lib2","SARS-CoV-2","TGGATACTCCAGCCAA",3,47.12,10.89,0.06,0.06,3,1,0,"1 nonsynonymous","T55Y",1
"lib2","SARS-CoV-2","TGGATACTCCCGCTCA",4,1.7,NA,NA,NA,NA,NA,NA,"stop","A14V S36* D97M",3
"lib2","SARS-CoV-2","TGGATACTGTAAATCA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61V N118V A145M",3
"lib2","SARS-CoV-2","TGGATACTGTTCATTA",6,32.63,7.28,-3.55,0.47,1.5,1.01,0.06,">1 nonsynonymous","S45V L57G F134V",3
"lib2","SARS-CoV-2","TGGATAGAATTGCATC",1,1.07,NA,NA,NA,NA,NA,NA,"stop","E10T G152* C158Q",3
"lib2","SARS-CoV-2","TGGATAGAGTTCAAAA",3,222.29,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","P177R",1
"lib2","SARS-CoV-2","TGGATAGTAACGAAAT",6,126.27,10.18,-0.65,0.06,2.57,1.09,0,"1 nonsynonymous","D90I",1
"lib2","SARS-CoV-2","TGGATAGTAGGCGGAT",4,1.42,NA,NA,NA,NA,NA,NA,"stop","A22P V37F A81* G166C",4
"lib2","SARS-CoV-2","TGGATATAAATGGTCC",11,176.25,9.91,-0.92,0.04,2.25,1.04,0,"1 nonsynonymous","K94Y",1
"lib2","SARS-CoV-2","TGGATATAACTAGATA",7,88.35,10.75,-0.08,0.06,2.99,1.04,0,">1 nonsynonymous","G152A P197S",2
"lib2","SARS-CoV-2","TGGATATCTAATGTTG",3,63.91,10.86,0.02,0.04,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATATTAAAAGGAA",4,132.32,10.8,-0.04,0.05,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATATTAGATAAAA",6,3.13,NA,NA,NA,NA,NA,NA,"stop","R124*",1
"lib2","SARS-CoV-2","TGGATATTGAGGTAAA",3,31.51,NA,NA,NA,NA,NA,NA,"stop","K48F G155*",2
"lib2","SARS-CoV-2","TGGATATTTAATAAAC",2,61.86,9.83,-1,0.14,1.88,1.06,0.01,">1 nonsynonymous","S53W F99Y",2
"lib2","SARS-CoV-2","TGGATCAAATTAAAAT",8,56.28,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","E10C V20E K132R",3
"lib2","SARS-CoV-2","TGGATCAACGTTGGTA",3,13.86,10.84,0,0.12,2.92,1.05,0.01,">1 nonsynonymous","N4V N110K S200N",3
"lib2","SARS-CoV-2","TGGATCAACTGAAAGC",8,42.01,6.23,-4.6,0.44,1.5,1.09,0.01,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","TGGATCAGACGGTGAA",6,234.18,8.38,-2.45,0.13,2.87,1.07,0.01,">1 nonsynonymous","Y143S G174D P197L",3
"lib2","SARS-CoV-2","TGGATCAGCTTTCATG",10,73.86,10.71,-0.13,0.05,2.99,1.04,0,"1 nonsynonymous","L60R",1
"lib2","SARS-CoV-2","TGGATCAGTCTTTCAG",13,831.42,10.67,-0.16,0.03,2.95,1.03,0,">1 nonsynonymous","L5M D90Q K128V",3
"lib2","SARS-CoV-2","TGGATCATAGGTGAGG",8,37.87,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","N92F I138P Y165W",3
"lib2","SARS-CoV-2","TGGATCCCTACCATGG",1,24.08,10.86,0.02,0.07,2.93,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATCCTTAAGATCA",3,19.46,9.95,-0.89,0.22,2.16,1.08,0.02,">1 nonsynonymous","C6M G83S D90E P96N",4
"lib2","SARS-CoV-2","TGGATCGGTCACTCCA",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68R G116T K198T",3
"lib2","SARS-CoV-2","TGGATCTGAACAGATT",2,12.27,7.65,-3.18,0.46,1.5,1.06,0.07,">1 nonsynonymous","S29G N130R D137G P149D E186I",5
"lib2","SARS-CoV-2","TGGATCTGAGGCCGAG",6,4.56,NA,NA,NA,NA,NA,NA,"stop","I72* R124I K199N",3
"lib2","SARS-CoV-2","TGGATCTTTACTCAAA",3,68.74,10.82,-0.02,0.06,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATGAAATATAAAG",7,48.93,6,-4.84,0.84,2.17,1.12,0.01,">1 nonsynonymous","W23L C49V E135N A145E",4
"lib2","SARS-CoV-2","TGGATGAACCTTTCAC",9,92.25,10.63,-0.21,0.05,2.9,1.1,0,">1 nonsynonymous","N58Q K114L",2
"lib2","SARS-CoV-2","TGGATGACAAAGTCTA",1,16.77,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L38C S53V L60K K114L",4
"lib2","SARS-CoV-2","TGGATGAGACCTCTTC",3,53.55,10.89,0.06,0.08,2.89,1.13,0,">1 nonsynonymous","P54R T201M",2
"lib2","SARS-CoV-2","TGGATGATAAAACAGA",3,17.96,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","E10F A33C V52T I80E A89V T148N",6
"lib2","SARS-CoV-2","TGGATGATACATGAGC",6,41.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A81L S113L Y119L",3
"lib2","SARS-CoV-2","TGGATGCAAACAAATT",7,14.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L95P N107L V115L E141G T170H",5
"lib2","SARS-CoV-2","TGGATGCAACAATTGG",2,1.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I P177Y",2
"lib2","SARS-CoV-2","TGGATGCAATAGAGGA",1,33.7,10.91,0.07,0.26,2.69,1.11,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TGGATGCATATTTGAA",5,104.21,9.66,-1.18,0.04,2.85,1.07,0,">1 nonsynonymous","L38V Y119R",2
"lib2","SARS-CoV-2","TGGATGCCTAAATCCT",2,8.44,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","G74R G83Y Y91T W106R E154T T201E",6
"lib2","SARS-CoV-2","TGGATGCTAATGTGTG",7,53.95,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","G86K Y121K G166Q",3
"lib2","SARS-CoV-2","TGGATGCTATATCAAC",7,62.99,6.11,-4.72,0.57,1.55,1.17,0.01,">1 nonsynonymous","G9N T15G W23K N107T G174K",5
"lib2","SARS-CoV-2","TGGATGGCAAGACTGC",12,40.39,6.8,-4.03,0.5,1.5,1.31,0.05,">1 nonsynonymous","A42L C150I Y165I",3
"lib2","SARS-CoV-2","TGGATGGCATAGATGA",5,44.1,6,-4.84,0.89,1.5,1.1,0.01,">1 nonsynonymous","F17N D59M S139I F156Q",4
"lib2","SARS-CoV-2","TGGATGGCGCAGCACG",2,31.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G9P G51W Y91L",3
"lib2","SARS-CoV-2","TGGATGTATCATCATC",3,10.14,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V103T R127L F160L V173K",4
"lib2","SARS-CoV-2","TGGATGTCACCAAATG",8,37.94,10.7,-0.13,0.04,3,1.02,0,">1 nonsynonymous","S29W V37E",2
"lib2","SARS-CoV-2","TGGATGTGACTTCTAG",9,146.83,7.83,-3,0.15,1.51,1.17,0.01,">1 nonsynonymous","L5P R25S A42S D98A L111H F156S",6
"lib2","SARS-CoV-2","TGGATGTGCTATAGCC",3,12.09,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G83K Y121I F134N N151S G166D K199V",6
"lib2","SARS-CoV-2","TGGATTAAATTCGAGA",2,10.15,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","R27M N92R K199N",3
"lib2","SARS-CoV-2","TGGATTAAGAAGAAGC",7,18.91,8.81,-2.02,0.27,1.6,1.13,0.02,">1 nonsynonymous","L5C W23F F44W G51V",4
"lib2","SARS-CoV-2","TGGATTAATAGCGTTT",2,21.6,10.5,-0.34,0.16,2.81,1,0.01,">1 nonsynonymous","D75E K128I",2
"lib2","SARS-CoV-2","TGGATTACACAAACCA",4,11.94,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I2S W23L A105T G117L",4
"lib2","SARS-CoV-2","TGGATTACAGTAGAAA",1,34.84,10.83,-0.01,0.04,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGATTAGTAAGACCC",11,180.49,9.37,-1.46,0.08,2.35,1.07,0,"1 nonsynonymous","N107V",1
"lib2","SARS-CoV-2","TGGATTATACTTAACG",8,71.92,8.95,-1.88,0.08,2.22,1.08,0,">1 nonsynonymous","Y39R A89V G174W",3
"lib2","SARS-CoV-2","TGGATTATCTACGATC",1,42.29,8.99,-1.84,0.12,2.62,1.18,0.01,">1 nonsynonymous","C6Q F156E",2
"lib2","SARS-CoV-2","TGGATTATCTGAGTTT",2,13.26,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A89T S113P P133G P161T",4
"lib2","SARS-CoV-2","TGGATTCAAAGATATG",6,81.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40V Q84R D97R N120P",4
"lib2","SARS-CoV-2","TGGATTCATATAAAGC",1,1.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q Y50S L57C",3
"lib2","SARS-CoV-2","TGGATTCCTCTGAATG",2,94.75,9.75,-1.08,0.08,1.97,1.02,0,">1 nonsynonymous","C49I T148R",2
"lib2","SARS-CoV-2","TGGATTGTCCGATTTT",3,12.67,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51R G86M F99I S147L",4
"lib2","SARS-CoV-2","TGGATTGTTCAGATCT",8,37.48,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","F70S T100L V173Y",3
"lib2","SARS-CoV-2","TGGATTTACCGCCTGT",1,16.13,6,-4.84,1.74,1.5,1.17,0.03,">1 nonsynonymous","T63M V182S",2
"lib2","SARS-CoV-2","TGGATTTGACGACCTT",4,32.03,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","G51T P96F K114C N120H",4
"lib2","SARS-CoV-2","TGGATTTTCGATTCAT",4,18.46,9.55,-1.28,0.17,2.09,1,0.01,"1 nonsynonymous","Y50S",1
"lib2","SARS-CoV-2","TGGATTTTTGACTTCT",7,52.82,9.07,-1.77,0.15,1.73,1,0.01,">1 nonsynonymous","G116R R127N",2
"lib2","SARS-CoV-2","TGGCAAAAAAAATAAT",1,10.87,10.89,0.05,0.09,2.94,1.09,0,">1 nonsynonymous","F8L N64A",2
"lib2","SARS-CoV-2","TGGCAAAAACATCGGG",4,74.9,10.64,-0.19,0.08,2.88,1,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TGGCAAAAAGTCCAAA",3,0.54,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TGGCAAAAATGAGTTT",2,79.59,9.58,-1.26,0.08,2.86,1.08,0,">1 nonsynonymous","S113G Y121L",2
"lib2","SARS-CoV-2","TGGCAAAAATGATACC",13,110.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9N S36G R73E G155F",4
"lib2","SARS-CoV-2","TGGCAAATAAAGCGTA",16,247.17,10.28,-0.56,0.04,2.9,1.04,0,">1 nonsynonymous","F44I L60T",2
"lib2","SARS-CoV-2","TGGCAAATAAATGATA",6,61.83,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F70Q D112Q",2
"lib2","SARS-CoV-2","TGGCAAATTGATAAAA",6,135.79,9.62,-1.21,0.05,2.02,1.06,0,">1 nonsynonymous","K56R N92S S129F",3
"lib2","SARS-CoV-2","TGGCAACAATAAAGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54K V103K N120C Q144F T201E",5
"lib2","SARS-CoV-2","TGGCAACAATCAAATA",1,28.26,8.52,-2.31,0.14,1.84,1.06,0.01,">1 nonsynonymous","A14T F44N F47S T201L",4
"lib2","SARS-CoV-2","TGGCAACATTCCGAAA",3,30.09,6,-4.84,1.55,1.5,1.12,0.03,">1 nonsynonymous","T100Y I104L D112N E154I",4
"lib2","SARS-CoV-2","TGGCAACCCGCATCAA",6,91.03,10.83,-0.01,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGGCAAGAGAGAACTT",1,37.47,7.83,-3.01,0.21,1.5,1.14,0.02,">1 nonsynonymous","G51H W106V L122F G174E",4
"lib2","SARS-CoV-2","TGGCAAGCATACCCGC",4,99.62,10.92,0.09,0.06,2.97,1.04,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","TGGCAAGGAAGACGAG",10,118.24,10.79,-0.05,0.04,2.95,1.08,0,"1 nonsynonymous","V37Y",1
"lib2","SARS-CoV-2","TGGCAAGTAATGCCGG",2,31.86,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","T3R F8Y L38I F44C G51R A89T Y121H",7
"lib2","SARS-CoV-2","TGGCAAGTATTATGGG",5,55.46,10.21,-0.63,0.03,2.81,1.01,0,">1 nonsynonymous","Y123A P149S F160R",3
"lib2","SARS-CoV-2","TGGCAATAACTCTGTT",4,86.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y50A Y121P",2
"lib2","SARS-CoV-2","TGGCAATATAGTCCCG",10,32.89,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I104H G146L",2
"lib2","SARS-CoV-2","TGGCAATGGCTTTTAT",3,37.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39K C49I G86H C158P",4
"lib2","SARS-CoV-2","TGGCAATTACTGAGAA",6,225.01,10.22,-0.61,0.03,2.33,1,0,">1 nonsynonymous","T55N N109R R127K N151G H189P P197S",6
"lib2","SARS-CoV-2","TGGCAATTGTATCACT",6,126.01,10.19,-0.64,0.06,2.72,1.06,0,">1 nonsynonymous","S29V T46A",2
"lib2","SARS-CoV-2","TGGCAATTTAGTAAAA",5,42.66,9.75,-1.09,0.1,2.82,1.06,0,"1 nonsynonymous","F44N",1
"lib2","SARS-CoV-2","TGGCACAAAGGCACGT",9,56.71,9.72,-1.12,0.09,2.49,1.04,0,">1 nonsynonymous","T3P N58L G116V",3
"lib2","SARS-CoV-2","TGGCACAATATTGTAT",3,23.48,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F12K F99K G152N",3
"lib2","SARS-CoV-2","TGGCACATAACCACCT",2,7.16,8.84,-1.99,0.24,2.71,1.13,0.02,">1 nonsynonymous","N4R S113R",2
"lib2","SARS-CoV-2","TGGCACCACACCACGC",2,58.37,9.74,-1.1,0.11,2.66,1.17,0.01,">1 nonsynonymous","N4K V115D Q144K",3
"lib2","SARS-CoV-2","TGGCACCACCGATTAA",1,2.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10G C49G W106I P197Q",4
"lib2","SARS-CoV-2","TGGCACCCCACTATAA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","S43* I88A Y121V",3
"lib2","SARS-CoV-2","TGGCACCCTAATAATA",20,383.76,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A33L N92K C158P",3
"lib2","SARS-CoV-2","TGGCACCCTGCCTAAA",2,32.12,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C61Q V65R R179L",3
"lib2","SARS-CoV-2","TGGCACCTGGAGCCTA",5,4.14,NA,NA,NA,NA,NA,NA,"stop","A81V N118P F134* G166C",4
"lib2","SARS-CoV-2","TGGCACGAAAGAGATC",2,34.81,9.14,-1.7,0.12,1.96,1.11,0.01,">1 nonsynonymous","I2S T55E Y66N T85C V180M",5
"lib2","SARS-CoV-2","TGGCACGGATCAACCT",3,57.07,11.1,0.26,0.05,2.91,1.11,0,"1 nonsynonymous","Q163A",1
"lib2","SARS-CoV-2","TGGCACGTAAACCCTT",8,107.74,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","D34G F62I N157R",3
"lib2","SARS-CoV-2","TGGCACTATGTTGCCA",7,33.51,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A33E C158N",2
"lib2","SARS-CoV-2","TGGCACTGTCAATGTA",6,91.73,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I28S S45T G86D S129V F156W",5
"lib2","SARS-CoV-2","TGGCACTTGTACAAAC",1,9.74,10.7,-0.14,0.07,3,1,0,">1 nonsynonymous","G9P V37L",2
"lib2","SARS-CoV-2","TGGCAGAAAAACAAGC",3,89.7,10.16,-0.68,0.06,2.67,1.03,0,"1 nonsynonymous","R25T",1
"lib2","SARS-CoV-2","TGGCAGAAACCTACAC",8,32.63,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5Y S41K V65S G86L W106C S147F",6
"lib2","SARS-CoV-2","TGGCAGAGTGGTCCCA",13,46.82,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11C D112L G172S",3
"lib2","SARS-CoV-2","TGGCAGATTAACTGAA",5,50.38,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36P F99I A105K R136S",4
"lib2","SARS-CoV-2","TGGCAGCGGAATATAG",1,25.43,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","P96L G146K",2
"lib2","SARS-CoV-2","TGGCAGCTTAGGCGAA",13,188.34,10.83,0,0.04,2.89,1.11,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TGGCAGGATCGAATCG",3,14.5,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10S K87C V182G",3
"lib2","SARS-CoV-2","TGGCAGGTAACCATCT",4,33.2,9.79,-1.05,0.09,2.09,1.18,0,">1 nonsynonymous","F44C D97L Y123M",3
"lib2","SARS-CoV-2","TGGCAGTGTGGGATCA",11,125.98,10.85,0.02,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGCAGTGTTGTGCTT",6,15.46,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","Y21F A33F C61S I80Q G83L D97S",6
"lib2","SARS-CoV-2","TGGCAGTGTTTTCACG",5,25.5,9.88,-0.95,0.26,1.5,1.07,0.04,">1 nonsynonymous","C6Q L38S",2
"lib2","SARS-CoV-2","TGGCATAAAACAGTAC",9,69.89,6,-4.84,2,1.5,1.34,0.03,">1 nonsynonymous","L60V Y123T C150Y V153A",4
"lib2","SARS-CoV-2","TGGCATAAGGATAATC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64V G83I I142M N171I A192R T201Q",6
"lib2","SARS-CoV-2","TGGCATAGAGCAGCTA",3,16.08,7.64,-3.2,0.4,1.5,1.04,0.06,">1 nonsynonymous","L5W T15N G86H N118G Y123M E141T",6
"lib2","SARS-CoV-2","TGGCATAGGTATTCAA",1,16.71,6.41,-4.43,0.47,3,1.15,0.01,">1 nonsynonymous","F8L G116F S129K G155P",4
"lib2","SARS-CoV-2","TGGCATATAACCAGAC",9,57.4,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","A105Q Y123T Y175F",3
"lib2","SARS-CoV-2","TGGCATATCAAAGGGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12M A42V S69M S139L Y159E S200Y",6
"lib2","SARS-CoV-2","TGGCATATGTACCAAC",10,61.64,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","R16W D90P D112S",3
"lib2","SARS-CoV-2","TGGCATATGTCTGTCT",11,23.11,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","N1C T63S D90R N107T E141W S200L",6
"lib2","SARS-CoV-2","TGGCATCAGGCTAATA",2,17.73,9.09,-1.74,0.13,3,1.06,0.01,">1 nonsynonymous","I2H Q176A",2
"lib2","SARS-CoV-2","TGGCATCCCAGTATAG",3,10.23,6,-4.84,2,3,1.23,0,">1 nonsynonymous","L5N A18Y L60K G86Q K114E",5
"lib2","SARS-CoV-2","TGGCATCTGAAAAAAG",3,9.08,10.84,0,0.09,2.9,1.14,0,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","TGGCATGCCAATTACT",14,226.5,10.59,-0.24,0.04,2.91,1.08,0,">1 nonsynonymous","N1R K87Y S139N",3
"lib2","SARS-CoV-2","TGGCATGCTACTAAAG",7,124.13,6.1,-4.74,0.52,1.5,1.14,0.01,">1 nonsynonymous","R136P Y178S",2
"lib2","SARS-CoV-2","TGGCATGTCTCAATAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* F44V C61K W106A S113W E135T E141L",7
"lib2","SARS-CoV-2","TGGCATGTGTAAGCTT",1,0.67,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","TGGCATTAACGATGGA",2,10.17,10.02,-0.82,0.08,2.93,1.07,0,">1 nonsynonymous","A33T S41V D97P",3
"lib2","SARS-CoV-2","TGGCATTAGAATGGGA",5,38.45,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C6N S19W D97P F185I",4
"lib2","SARS-CoV-2","TGGCATTAGATCGAAT",6,79.99,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","F62R K94D Q168R",3
"lib2","SARS-CoV-2","TGGCATTGGCATATCA",1,71.89,10.21,-0.63,0.04,2.88,1.05,0,">1 nonsynonymous","A14I P149R",2
"lib2","SARS-CoV-2","TGGCCAAACACACAAT",9,137,10.78,-0.05,0.05,2.97,1.03,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","TGGCCAAATAAGGATA",1,2.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E L95T I142K",3
"lib2","SARS-CoV-2","TGGCCAACATTTCTTG",1,24.13,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14D F44N T55A F70H S139D",5
"lib2","SARS-CoV-2","TGGCCACCCGAAACAG",1,29.49,6,-4.84,2,3,1.12,0,">1 nonsynonymous","S113R F156C K198S",3
"lib2","SARS-CoV-2","TGGCCAGCATTCTATA",11,104.39,10.2,-0.64,0.04,2.9,1.07,0,">1 nonsynonymous","L5Q D97C I104M T201K",4
"lib2","SARS-CoV-2","TGGCCAGCCATGTGAT",4,0.73,NA,NA,NA,NA,NA,NA,"stop","D97* N157F",2
"lib2","SARS-CoV-2","TGGCCAGCTATGCCGT",5,28.75,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","C49G G83R D112Y A190S",4
"lib2","SARS-CoV-2","TGGCCAGTTACCGAAC",1,70.53,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L57W F99S N120A",3
"lib2","SARS-CoV-2","TGGCCATATTATGCAA",2,24.72,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F126H L162E G166H",3
"lib2","SARS-CoV-2","TGGCCATTCAATATTT",3,49.17,10.69,-0.15,0.07,2.84,1.06,0,">1 nonsynonymous","K94H F160S",2
"lib2","SARS-CoV-2","TGGCCCACATAGACAG",2,28.7,10.01,-0.83,0.16,2.13,1.23,0.01,">1 nonsynonymous","T46M Y91I K132S",3
"lib2","SARS-CoV-2","TGGCCCAGACCCATAC",2,40.18,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V103A G117S",2
"lib2","SARS-CoV-2","TGGCCCATAACAACGG",6,23.23,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","F47E T170L",2
"lib2","SARS-CoV-2","TGGCCCATGACCACAC",6,71.15,8.5,-2.34,0.12,2.42,1.08,0.01,">1 nonsynonymous","R27S F44N T148P",3
"lib2","SARS-CoV-2","TGGCCCATGTCAACGT",7,80.88,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V173S R179M",2
"lib2","SARS-CoV-2","TGGCCCGTAACAAGTC",5,11.5,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V103S N109M G174K",3
"lib2","SARS-CoV-2","TGGCCCGTGCTCTCCT",2,0.52,NA,NA,NA,NA,NA,NA,"stop","S113V P133E Y165*",3
"lib2","SARS-CoV-2","TGGCCCGTTCGATCAG",4,3.59,NA,NA,NA,NA,NA,NA,"stop","K56* F99N I104* D137F N151*",5
"lib2","SARS-CoV-2","TGGCCCTAAATAAGAA",7,11.16,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","P54W G116R R127M",3
"lib2","SARS-CoV-2","TGGCCCTAATCCAATG",3,11.34,10.57,-0.27,0.09,2.95,1,0,">1 nonsynonymous","A18E T193I",2
"lib2","SARS-CoV-2","TGGCCCTCCACAACAT",10,67.53,6,-4.84,2,1.5,1.32,0.05,">1 nonsynonymous","N13A A67I D90Y G155C",4
"lib2","SARS-CoV-2","TGGCCCTCTCTCAAGC",4,34.6,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F70V G83C",2
"lib2","SARS-CoV-2","TGGCCGCTAAGGGCAA",3,18.85,9.84,-0.99,0.21,2.17,1,0.02,">1 nonsynonymous","Y21A N110T N151G T201V",4
"lib2","SARS-CoV-2","TGGCCGCTTCTCCTAC",8,4.59,NA,NA,NA,NA,NA,NA,"stop","G9* V65G Q144V V173H",4
"lib2","SARS-CoV-2","TGGCCGTGCTAATTCG",10,1.7,NA,NA,NA,NA,NA,NA,"stop","K26T Q144*",2
"lib2","SARS-CoV-2","TGGCCTACAACGATAT",7,47.31,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L5D C49L D68P A81V",4
"lib2","SARS-CoV-2","TGGCCTATTAAATCGG",7,138.06,10.83,-0.01,0.06,2.91,1.09,0,">1 nonsynonymous","L60Q T100R",2
"lib2","SARS-CoV-2","TGGCCTCTATACCAAG",12,0.76,NA,NA,NA,NA,NA,NA,"stop","N13S A18* T85R T100I R127F",5
"lib2","SARS-CoV-2","TGGCCTTTGTCCATAT",4,57.64,8.51,-2.32,0.17,2.4,1.07,0.01,">1 nonsynonymous","T3E Y143N",2
"lib2","SARS-CoV-2","TGGCGAAAAATCGAGA",2,5.54,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","N13L V37T L95E",3
"lib2","SARS-CoV-2","TGGCGAACGGCAGCTA",6,94.99,9.02,-1.81,0.09,1.7,1.04,0,">1 nonsynonymous","N24C G83V K198A",3
"lib2","SARS-CoV-2","TGGCGAACGTATGACA",4,121.46,10.84,0.01,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGCGAAGAGTTGTAC",3,102.98,10.81,-0.03,0.04,2.91,1.06,0,"1 nonsynonymous","S43K",1
"lib2","SARS-CoV-2","TGGCGAATAAACAGAG",9,114.2,10.82,-0.02,0.06,2.89,1.12,0,"1 nonsynonymous","H189R",1
"lib2","SARS-CoV-2","TGGCGAATGCAGTACG",10,104.24,11.02,0.18,0.06,2.92,1.11,0,">1 nonsynonymous","N4S L122K S200M",3
"lib2","SARS-CoV-2","TGGCGACCTGATACTT",8,47.45,6,-4.84,2,1.5,1.17,0.06,">1 nonsynonymous","W23Q R78C P96N K114F",4
"lib2","SARS-CoV-2","TGGCGACGTAAATCAG",10,28.21,6,-4.84,2,1.5,1.17,0.01,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TGGCGAGAGATAGGTC",2,35.18,10.82,-0.01,0.08,2.88,1.13,0,"1 nonsynonymous","A190T",1
"lib2","SARS-CoV-2","TGGCGAGCTCAATATT",9,147.87,10.77,-0.07,0.03,2.93,1.09,0,">1 nonsynonymous","R16I T55Y",2
"lib2","SARS-CoV-2","TGGCGATAAGAATGAG",8,718.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S41V Y93W G101D S129R R136L",5
"lib2","SARS-CoV-2","TGGCGATCCAAGCGTT",7,235.15,10.79,-0.05,0.05,2.89,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGCGATGTCCCCCCT",2,17.14,10.68,-0.15,0.07,2.8,1.22,0,"1 nonsynonymous","I2F",1
"lib2","SARS-CoV-2","TGGCGATGTCTGAACC",6,59.2,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G9S C49Q V77F N157D",4
"lib2","SARS-CoV-2","TGGCGATTAATTGCAT",4,21.94,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","K56M N64S Y93S F160G",4
"lib2","SARS-CoV-2","TGGCGCACACATAAAA",10,40.84,9.2,-1.63,0.35,1.53,1.14,0.06,">1 nonsynonymous","S41I W106V I138R",3
"lib2","SARS-CoV-2","TGGCGCTAACCTAAAA",2,1.36,NA,NA,NA,NA,NA,NA,"stop","F8S S41R Q84S S129T P149L V173*",6
"lib2","SARS-CoV-2","TGGCGGACGATTAACT",2,0.8,NA,NA,NA,NA,NA,NA,"stop","F99Y V153* H189N K199F",4
"lib2","SARS-CoV-2","TGGCGGCGCGCTAGGA",4,55.55,10.67,-0.17,0.04,2.95,1.05,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","TGGCGGGAAATCTATA",5,56.29,10.63,-0.21,0.04,2.86,1.11,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","TGGCGGGAACCTGATC",10,21.7,NA,NA,NA,NA,NA,NA,"stop","R25*",1
"lib2","SARS-CoV-2","TGGCGGGCCCTTCACA",5,23.75,10.18,-0.66,0.09,2.86,1.07,0,"1 nonsynonymous","S43N",1
"lib2","SARS-CoV-2","TGGCGGGCGCGGCGAC",7,128.42,10.63,-0.21,0.03,2.94,1.04,0,">1 nonsynonymous","F62N S147T",2
"lib2","SARS-CoV-2","TGGCGGGTGACAAAAA",2,36.7,9.05,-1.78,0.1,2.92,1.01,0,">1 nonsynonymous","N64Y Y119I E141R",3
"lib2","SARS-CoV-2","TGGCGGTGGACTGCTA",4,40.41,6.89,-3.95,0.27,1.7,1.15,0.02,">1 nonsynonymous","F12P Y50F Y119A",3
"lib2","SARS-CoV-2","TGGCGGTTAGCGCCTA",3,23.63,10.83,0,0.12,2.81,1.2,0,">1 nonsynonymous","V37E I104V",2
"lib2","SARS-CoV-2","TGGCGTAAATTCATGC",3,28.03,9.51,-1.32,0.06,2.87,1.08,0,">1 nonsynonymous","G51S L125V",2
"lib2","SARS-CoV-2","TGGCGTAAGCCCTGAG",1,5.77,7.98,-2.85,0.46,1.5,1.07,0.03,">1 nonsynonymous","G9L E76Y V173F",3
"lib2","SARS-CoV-2","TGGCGTACCGGGAAAC",3,15.84,10.48,-0.36,0.33,1.97,1.07,0.03,">1 nonsynonymous","D98V F134A",2
"lib2","SARS-CoV-2","TGGCGTACCTAACACA",2,12.96,8.26,-2.58,0.37,1.5,1,0.05,">1 nonsynonymous","V11W F70L",2
"lib2","SARS-CoV-2","TGGCGTCACACATGGT",1,0.46,NA,NA,NA,NA,NA,NA,"stop","F12G S53W P82H V115Q K198*",5
"lib2","SARS-CoV-2","TGGCGTCACGCAGACA",2,1.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R25A A33T P133H",3
"lib2","SARS-CoV-2","TGGCGTCCAAGAATAT",6,75.9,8.67,-2.17,0.08,2.91,1.06,0,"1 nonsynonymous","Y143S",1
"lib2","SARS-CoV-2","TGGCGTGATAAAGCAC",10,203.55,8.57,-2.27,0.08,2.48,1.05,0,">1 nonsynonymous","S41Q D98F G117S",3
"lib2","SARS-CoV-2","TGGCGTGATATATGAG",16,123.1,8.82,-2.01,0.07,2.94,1.09,0,"1 nonsynonymous","N157T",1
"lib2","SARS-CoV-2","TGGCGTGATCAAAAAT",3,52.71,9.94,-0.9,0.08,2.39,1.03,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","TGGCGTGCCTTTTCCT",5,15.26,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","I2R I104E",2
"lib2","SARS-CoV-2","TGGCGTGTCGAGACAA",3,32.86,7.29,-3.55,0.42,1.5,1.21,0.05,">1 nonsynonymous","T55I A81R G86S",3
"lib2","SARS-CoV-2","TGGCGTTAAAAAATCG",9,71.21,6,-4.84,2,3,1.17,0,">1 nonsynonymous","S41G G51F F62I V103Y N157I",5
"lib2","SARS-CoV-2","TGGCGTTCCTACTCAA",3,59.03,10.85,0.01,0.08,2.83,1.09,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","TGGCGTTGCAGAGACA",3,14.87,10.66,-0.18,0.1,2.89,1.1,0.01,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","TGGCGTTTAAGTCCTT",1,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V65S T85S V103S G146R",4
"lib2","SARS-CoV-2","TGGCGTTTCGACATAA",3,111.61,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N1V V52I C158P Q163S",4
"lib2","SARS-CoV-2","TGGCGTTTGGCTGGGT",1,28.79,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","P7L Y39V D90I L122I",4
"lib2","SARS-CoV-2","TGGCTAAAACACAAAC",4,30.27,10.68,-0.16,0.07,2.94,1.05,0,"1 nonsynonymous","G116I",1
"lib2","SARS-CoV-2","TGGCTAAAACGAAGAA",3,53.16,10.4,-0.44,0.05,2.96,1,0,">1 nonsynonymous","A14D K114Q",2
"lib2","SARS-CoV-2","TGGCTAAAGAGTAACC",3,77.95,9.18,-1.66,0.07,2.84,1.1,0,">1 nonsynonymous","A18K V37G F156G",3
"lib2","SARS-CoV-2","TGGCTAAAGGTACGCT",4,32.66,10.64,-0.2,0.07,2.9,1.09,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","TGGCTAAAGTGTTGCG",3,49.42,7.5,-3.34,0.12,2.02,1.12,0,">1 nonsynonymous","L125M C150A",2
"lib2","SARS-CoV-2","TGGCTAACCACATTAT",4,202.6,7.96,-2.87,0.13,1.56,1.1,0.01,"1 nonsynonymous","Q176Y",1
"lib2","SARS-CoV-2","TGGCTAAGTGTACAAC",1,111.84,10.15,-0.69,0.07,2.59,1.05,0,">1 nonsynonymous","V37E D90V",2
"lib2","SARS-CoV-2","TGGCTAATCACCTAAG",8,124.99,10.29,-0.54,0.04,2.82,1.08,0,">1 nonsynonymous","T46W V103I",2
"lib2","SARS-CoV-2","TGGCTAATCTCCCCAG",3,50.64,10.19,-0.65,0.07,2.83,1.04,0,">1 nonsynonymous","L5V S139Y",2
"lib2","SARS-CoV-2","TGGCTACAACGGCAAC",7,161.79,9.25,-1.58,0.08,2.09,1.09,0,">1 nonsynonymous","A42V D97A P161G",3
"lib2","SARS-CoV-2","TGGCTACAATTGCCAG",2,14.39,10.68,-0.15,0.04,3,1.01,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TGGCTACCATATTACC",12,185.7,8.39,-2.44,0.11,2.05,1.09,0,">1 nonsynonymous","T3A F126M Y143S",3
"lib2","SARS-CoV-2","TGGCTACCTCCAAAAA",5,107.02,9.82,-1.02,0.06,2.57,1.05,0,">1 nonsynonymous","T3L F8M G116W",3
"lib2","SARS-CoV-2","TGGCTAGGAGATTTAG",2,15.57,10.4,-0.44,0.08,2.85,1.12,0,">1 nonsynonymous","L122T F156L T201Y",3
"lib2","SARS-CoV-2","TGGCTAGTCTAACTGC",1,12.95,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","P82A I88E Y123D L131E P161K",5
"lib2","SARS-CoV-2","TGGCTATAAATAGGAA",4,66.91,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","G9S R27H N40V Y91V G117V G155A",6
"lib2","SARS-CoV-2","TGGCTATCCAATCTGA",3,0,NA,NA,NA,NA,NA,NA,"stop","C6* T85P D98Y",3
"lib2","SARS-CoV-2","TGGCTATGAATAATTT",2,76.72,10.18,-0.65,0.04,2.87,1.08,0,">1 nonsynonymous","V37N Y121I",2
"lib2","SARS-CoV-2","TGGCTATGGAGAACCG",14,126.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26E A105N T148V",3
"lib2","SARS-CoV-2","TGGCTCAAATAAATGG",10,13.38,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33D C61K K87A S108K",4
"lib2","SARS-CoV-2","TGGCTCAGAAATACAT",15,82.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8G F47D L95A Y119D T201L",5
"lib2","SARS-CoV-2","TGGCTCAGATGGTGAG",6,40.78,9.32,-1.51,0.15,1.95,1.03,0.01,">1 nonsynonymous","F44N W106I V173E",3
"lib2","SARS-CoV-2","TGGCTCATACACAAAA",2,39.85,6,-4.84,2,3,1.14,0,">1 nonsynonymous","S113Q Y165D",2
"lib2","SARS-CoV-2","TGGCTCATTGTCTACT",14,257.55,9.92,-0.91,0.06,2.23,1.05,0,"1 nonsynonymous","W106V",1
"lib2","SARS-CoV-2","TGGCTCCTACAATTCT",4,0.35,NA,NA,NA,NA,NA,NA,"stop","Y123*",1
"lib2","SARS-CoV-2","TGGCTCGGAGGAGTTA",1,9.4,6.22,-4.62,1.57,3,1.05,0.01,">1 nonsynonymous","L57Y V71T P82Y F99N N120S F160S N171I K199M",8
"lib2","SARS-CoV-2","TGGCTCTCACTGTAAT",3,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R N64R G86D P197S",4
"lib2","SARS-CoV-2","TGGCTGACATTTAGAT",1,47.13,10.51,-0.32,0.05,2.96,1.03,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","TGGCTGACCAATTTTT",3,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13W S19K N107R Y175V",4
"lib2","SARS-CoV-2","TGGCTGACTAGACAGG",6,0.64,NA,NA,NA,NA,NA,NA,"stop","E10G I72F V77A F99* I104S",5
"lib2","SARS-CoV-2","TGGCTGAGAATTTTCT",14,68.83,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R124M K132S E154V",3
"lib2","SARS-CoV-2","TGGCTGAGGAATACTC",2,19.27,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","A89D Y143Q",2
"lib2","SARS-CoV-2","TGGCTGCCAATCTTAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Y S29W S43I K56A I80V Y91N T100L",7
"lib2","SARS-CoV-2","TGGCTGGCCCGAATGT",4,67.52,8.8,-2.03,0.27,1.5,1,0.04,">1 nonsynonymous","V77G K198S",2
"lib2","SARS-CoV-2","TGGCTGGGAGCTAACA",5,36.85,10.75,-0.09,0.08,2.88,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGCTGGTCTATATAA",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36M C102R N109K A192S",4
"lib2","SARS-CoV-2","TGGCTGTAAGGATTGT",5,79.12,9.19,-1.64,0.1,1.59,1.09,0,">1 nonsynonymous","T63L L95T",2
"lib2","SARS-CoV-2","TGGCTGTCGAAGTGTG",11,110.15,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14T Y39F P54L L57T Y91D E141T",6
"lib2","SARS-CoV-2","TGGCTGTTAAAGTGAG",7,50.43,10.89,0.06,0.04,2.95,1.07,0,"1 nonsynonymous","N1D",1
"lib2","SARS-CoV-2","TGGCTGTTAGAAATCT",1,44.61,10.95,0.11,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGCTGTTATAGAATC",4,3.3,NA,NA,NA,NA,NA,NA,"stop","N1E S19* R27F R127I C158L",5
"lib2","SARS-CoV-2","TGGCTTAAATGATAAT",3,15.26,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3R G9E A67D F70Q E154R",5
"lib2","SARS-CoV-2","TGGCTTAATATTGAAC",7,196.97,10.17,-0.66,0.03,2.93,1.04,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","TGGCTTACGAAGTACT",22,226.36,9.69,-1.15,0.06,2.45,1.07,0,">1 nonsynonymous","S29D V37A Y91Q",3
"lib2","SARS-CoV-2","TGGCTTAGAGAAAACC",1,11.68,NA,NA,NA,NA,NA,NA,"stop","C49I K114*",2
"lib2","SARS-CoV-2","TGGCTTAGCTTTGGCC",8,97.94,10.81,-0.02,0.06,2.96,1.06,0,"1 nonsynonymous","T3M",1
"lib2","SARS-CoV-2","TGGCTTCAATACGAAC",5,33.81,10.84,0.01,0.08,2.97,1.07,0,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","TGGCTTCACTTCTACT",13,74.28,8.38,-2.46,0.12,1.62,1.14,0.01,">1 nonsynonymous","D34I T63E Y91H",3
"lib2","SARS-CoV-2","TGGCTTTAACATAGTT",10,151.41,8.38,-2.45,0.09,2.72,1.07,0,">1 nonsynonymous","R73E F160R A190V",3
"lib2","SARS-CoV-2","TGGCTTTATATGAAAC",3,68.06,8.96,-1.88,0.09,2.84,1.07,0,">1 nonsynonymous","G9P F47W N171L",3
"lib2","SARS-CoV-2","TGGCTTTCATTAAACA",3,11.48,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","C6L Y91S G155F Y165L",4
"lib2","SARS-CoV-2","TGGCTTTTAAATGTTA",5,3.62,NA,NA,NA,NA,NA,NA,"stop","D112L R136A Q144P L162S Y175* A190L K198R",7
"lib2","SARS-CoV-2","TGGCTTTTACCAAACA",4,41.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","P7L Y35L N58H W106K R127I G174V",6
"lib2","SARS-CoV-2","TGGCTTTTGTCTCGGA",10,125.34,9.07,-1.77,0.08,2.42,1.09,0,">1 nonsynonymous","R73P G83S",2
"lib2","SARS-CoV-2","TGGGAAAAGATAAAAT",2,9.01,10.63,-0.21,0.06,3,1,0,"1 nonsynonymous","N107P",1
"lib2","SARS-CoV-2","TGGGAAAATGTAAATA",13,2.41,NA,NA,NA,NA,NA,NA,"stop","Y35D L57R K114*",3
"lib2","SARS-CoV-2","TGGGAAACATCTGAAA",15,67.19,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F70S K87Y P149E G152S",4
"lib2","SARS-CoV-2","TGGGAAACCGAACTAA",4,109.01,10.8,-0.04,0.04,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGAAACGACCAGAC",10,125.33,6,-4.84,2,1.5,1.2,0.01,"1 nonsynonymous","A67P",1
"lib2","SARS-CoV-2","TGGGAAAGAAACTTTG",2,22.3,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","Y35A K94E P133N",3
"lib2","SARS-CoV-2","TGGGAAAGCAAGTATG",5,30.76,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L5A E76Y W106C",3
"lib2","SARS-CoV-2","TGGGAAATACATAAAA",7,131.32,10.81,-0.02,0.03,2.91,1.09,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TGGGAACAAGCCATCA",1,0.36,NA,NA,NA,NA,NA,NA,"stop","L5C G146* G152N",3
"lib2","SARS-CoV-2","TGGGAACACAAAAGTC",3,127.95,10.86,0.02,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGAACACAACTTAG",3,0.79,NA,NA,NA,NA,NA,NA,"stop","T55E A81* G101V N130H E141*",5
"lib2","SARS-CoV-2","TGGGAACATACCAGAT",6,0.83,NA,NA,NA,NA,NA,NA,"stop","S41T D90Y P169*",3
"lib2","SARS-CoV-2","TGGGAACATATGATAA",1,73.17,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F12S G86I R127L Y165W G174R P197L",6
"lib2","SARS-CoV-2","TGGGAACATGCTTATT",2,42.16,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y93P S147D",2
"lib2","SARS-CoV-2","TGGGAACCCTAATCCG",1,69.21,9.83,-1,0.07,2.63,1.03,0,">1 nonsynonymous","C6N R27W",2
"lib2","SARS-CoV-2","TGGGAACTGTTACATA",3,48.51,10.63,-0.21,0.06,2.89,1.08,0,"1 nonsynonymous","Y123W",1
"lib2","SARS-CoV-2","TGGGAAGCACAAATTA",13,1.76,NA,NA,NA,NA,NA,NA,"stop","A89K S184*",2
"lib2","SARS-CoV-2","TGGGAAGGCAACTACT",3,45.68,6,-4.84,2,2.49,1.19,0.01,">1 nonsynonymous","F12K L38E Y143D",3
"lib2","SARS-CoV-2","TGGGAATCATTCGTCC",4,5.86,10.93,0.09,0.19,2.99,1,0,">1 nonsynonymous","T55Y N120H",2
"lib2","SARS-CoV-2","TGGGAATTACTTCCTG",6,184,10.95,0.12,0.06,2.95,1.07,0,">1 nonsynonymous","S53E F62P L122R",3
"lib2","SARS-CoV-2","TGGGAATTATAAGCCA",6,71.82,10.04,-0.8,0.04,2.92,1.13,0,">1 nonsynonymous","T100L E154V",2
"lib2","SARS-CoV-2","TGGGACAAGCTACGCG",5,164.98,10.2,-0.63,0.03,2.96,1.04,0,"1 nonsynonymous","E154I",1
"lib2","SARS-CoV-2","TGGGACAATGATTAAT",1,29.8,10.2,-0.63,0.05,2.94,1,0,">1 nonsynonymous","C6L C61A",2
"lib2","SARS-CoV-2","TGGGACAATTAACAAC",3,18.01,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L5H G9N V65P F70S S164V",5
"lib2","SARS-CoV-2","TGGGACAATTACCATC",8,129.91,10.86,0.02,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGACAGAACATAAT",7,2.24,NA,NA,NA,NA,NA,NA,"stop","R27* S36Q R179L",3
"lib2","SARS-CoV-2","TGGGACAGTAGTTGCG",4,77.81,9.9,-0.94,0.09,2.07,1,0,">1 nonsynonymous","N4K F17L P149N",3
"lib2","SARS-CoV-2","TGGGACATAATGGCCT",2,1.03,NA,NA,NA,NA,NA,NA,"stop","Y35T A42C R78* F99M P133S K199L",6
"lib2","SARS-CoV-2","TGGGACATTACTTGCC",16,238.43,8.28,-2.56,0.1,2.39,1.07,0,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","TGGGACCAACGTACCT",5,14.36,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","V20G D112K K128R E154L",4
"lib2","SARS-CoV-2","TGGGACCAGCAGCTTA",3,38.96,8.43,-2.4,0.37,1.5,1,0.06,">1 nonsynonymous","L38N A89H",2
"lib2","SARS-CoV-2","TGGGACCGTAGCTCCA",3,11.84,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","P54L G86K S113V",3
"lib2","SARS-CoV-2","TGGGACCTAATGGCCA",4,71.35,8.18,-2.66,0.13,1.59,1.08,0.01,">1 nonsynonymous","A67C N107T N120K",3
"lib2","SARS-CoV-2","TGGGACCTACTCAAGA",2,26.16,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","C49I S129A G146R G155A",4
"lib2","SARS-CoV-2","TGGGACGACATTGCTG",10,93.25,10.83,-0.01,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGACGATGCTAAAA",1,21.48,9.07,-1.77,0.17,1.68,1.06,0.01,">1 nonsynonymous","A105L T148K",2
"lib2","SARS-CoV-2","TGGGACTCCAGCACCA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","A22K V32F K87H K132* S139V",5
"lib2","SARS-CoV-2","TGGGACTCCGCATATT",1,40.21,10.09,-0.75,0.09,2.77,1.03,0,">1 nonsynonymous","R27N R127S",2
"lib2","SARS-CoV-2","TGGGAGAAAAAGTAGG",7,1100.58,8.02,-2.82,0.11,2.18,1.07,0,"1 nonsynonymous","Y143G",1
"lib2","SARS-CoV-2","TGGGAGAACCTAGTCG",4,87.04,10.55,-0.29,0.04,2.94,1.05,0,">1 nonsynonymous","N130L N151I",2
"lib2","SARS-CoV-2","TGGGAGACGACAAGAC",3,78.21,7.71,-3.13,0.16,1.66,1.1,0.01,">1 nonsynonymous","I28F S36L S53L D112S",4
"lib2","SARS-CoV-2","TGGGAGAGATTACGGA",3,65.91,9.9,-0.93,0.07,2.41,1.06,0,">1 nonsynonymous","F134G Y178S S184Y",3
"lib2","SARS-CoV-2","TGGGAGATAATACCGG",18,320.4,10.06,-0.77,0.04,2.62,1.04,0,">1 nonsynonymous","S45T N107G",2
"lib2","SARS-CoV-2","TGGGAGCAACAGATTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L D68E K87G",3
"lib2","SARS-CoV-2","TGGGAGGACTCCACAT",2,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V D137T",2
"lib2","SARS-CoV-2","TGGGAGGTGAGACGGA",17,2.71,NA,NA,NA,NA,NA,NA,"stop","V37Q K48P V65L V153* F160G S184L",6
"lib2","SARS-CoV-2","TGGGAGTACACCTTGG",4,44.67,10.81,-0.03,0.07,3,1.03,0,">1 nonsynonymous","V37G K56L",2
"lib2","SARS-CoV-2","TGGGATAAGTCGAACA",9,36.3,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N13C V20L V115T L162G",4
"lib2","SARS-CoV-2","TGGGATAAGTCTCAGT",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37W G83V",2
"lib2","SARS-CoV-2","TGGGATACCCAAACTT",13,108.04,10.78,-0.06,0.07,2.84,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGATACCCGATATT",4,55.22,9.27,-1.57,0.11,2.47,1.04,0.01,">1 nonsynonymous","A14E N118Y",2
"lib2","SARS-CoV-2","TGGGATACGTCACTCA",8,159.59,9.12,-1.72,0.05,2.84,1.07,0,">1 nonsynonymous","A42R F167W",2
"lib2","SARS-CoV-2","TGGGATCATCGAAATT",2,0.07,NA,NA,NA,NA,NA,NA,"stop","I28G Y35D T55*",3
"lib2","SARS-CoV-2","TGGGATCGAACCTATT",4,64.84,9.42,-1.42,0.07,1.88,1.06,0,">1 nonsynonymous","L38K N110V",2
"lib2","SARS-CoV-2","TGGGATCGACTCTAGC",3,16.76,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y50I S108L",2
"lib2","SARS-CoV-2","TGGGATGAGAAGGTGA",3,32.56,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33L V52I I104W R136E P149S P169R",6
"lib2","SARS-CoV-2","TGGGATGCAAAACAGA",6,1.93,NA,NA,NA,NA,NA,NA,"stop","Y50N N130D S147V Q163*",4
"lib2","SARS-CoV-2","TGGGATGCTTGGCAGT",11,102.57,10.66,-0.17,0.03,2.94,1.05,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TGGGATTATTAGAAGT",6,88.37,10.74,-0.1,0.04,2.95,1.07,0,">1 nonsynonymous","L60G L122H E141S",3
"lib2","SARS-CoV-2","TGGGATTGTACTACGC",20,137.39,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6W D97T L131C T140Q T201P",5
"lib2","SARS-CoV-2","TGGGATTTACAGTATA",2,69.18,8.4,-2.43,0.12,2.74,1.14,0.01,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","TGGGCAAAATTACCGA",4,13.78,6,-4.84,1.43,3,1.17,0.01,">1 nonsynonymous","V103S Y119W",2
"lib2","SARS-CoV-2","TGGGCAAACCAAATGA",1,40.7,6,-4.84,1.45,1.5,1.22,0.03,">1 nonsynonymous","G9M N40Y D59Y K94V L122E T201N",6
"lib2","SARS-CoV-2","TGGGCAAGTAACAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","K128* C150M Y159T",3
"lib2","SARS-CoV-2","TGGGCAAGTCAAAATT",3,12.53,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N1W D97G S139L",3
"lib2","SARS-CoV-2","TGGGCAATCGTCATTG",2,30.9,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L57S G86P T100D E135L",4
"lib2","SARS-CoV-2","TGGGCAATTCGTATCC",3,38.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F12S G51W",2
"lib2","SARS-CoV-2","TGGGCACATATTCAAA",8,74.56,10.35,-0.48,0.06,2.88,1.12,0,"1 nonsynonymous","F156R",1
"lib2","SARS-CoV-2","TGGGCACTTAGTCAGA",1,40.03,9.93,-0.91,0.1,2.5,1,0.01,"1 nonsynonymous","V20S",1
"lib2","SARS-CoV-2","TGGGCAGACGTTCATT",2,131.89,10.76,-0.07,0.03,2.93,1.05,0,">1 nonsynonymous","G174N H189N",2
"lib2","SARS-CoV-2","TGGGCAGCAGCTGAAG",2,14.94,9.63,-1.2,0.2,1.8,1.05,0.01,">1 nonsynonymous","A14L S164A E186V",3
"lib2","SARS-CoV-2","TGGGCAGGCTTAGTGA",1,21.61,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","V32L C102R I142L G172S",4
"lib2","SARS-CoV-2","TGGGCAGGGCGCCTAA",3,73.35,9.92,-0.92,0.09,2.3,1.06,0,"1 nonsynonymous","E76F",1
"lib2","SARS-CoV-2","TGGGCAGTATCCGGAG",7,61.05,8.46,-2.37,0.07,2.79,1.09,0,"1 nonsynonymous","S113Y",1
"lib2","SARS-CoV-2","TGGGCAGTCAATACCG",2,24.78,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N1Y N30Y D112I R127E",4
"lib2","SARS-CoV-2","TGGGCATATGTATACC",4,0.52,NA,NA,NA,NA,NA,NA,"stop","I28L D68M T100G Y123* T201S",5
"lib2","SARS-CoV-2","TGGGCCAGACCAACAT",1,42.98,10.87,0.03,0.03,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TGGGCCAGATATTTGG",5,112.09,9.58,-1.25,0.07,2.13,1.07,0,">1 nonsynonymous","A14V F44E L122F K128N",4
"lib2","SARS-CoV-2","TGGGCCATAGGATGCA",1,20.08,10.19,-0.65,0.38,1.93,1.03,0.07,">1 nonsynonymous","R124P P149N",2
"lib2","SARS-CoV-2","TGGGCCATTAATAACC",9,3.6,NA,NA,NA,NA,NA,NA,"stop","N4Q V20M V37E F44C W106*",5
"lib2","SARS-CoV-2","TGGGCCCAGTTTTTAA",3,41.26,10.21,-0.62,0.08,2.75,1.02,0,">1 nonsynonymous","T55S G83V E141N",3
"lib2","SARS-CoV-2","TGGGCCCGAATTACAG",10,102.23,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","K87I P96A P161T G166F T201V",5
"lib2","SARS-CoV-2","TGGGCCGCACGACTGG",7,78.86,10.26,-0.57,0.02,2.89,1.11,0,">1 nonsynonymous","V32D F126L",2
"lib2","SARS-CoV-2","TGGGCCGGGTCGTGAA",2,1.38,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","TGGGCCGTGCAAAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","P7V D34L L38T V77S P96H E135L E141*",7
"lib2","SARS-CoV-2","TGGGCCGTTATGTGTA",1,2.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T A42R C61N D90Y G146T Y165W",6
"lib2","SARS-CoV-2","TGGGCCTCGAAAGTAA",1,29.78,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N1S V37S N64C E141Q N157I",5
"lib2","SARS-CoV-2","TGGGCCTGATACCTGG",2,15.04,10.72,-0.12,0.05,3,1.05,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","TGGGCGAAAATTTACC",7,94.71,10.9,0.07,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGCGACTCACATGG",8,32.85,6,-4.84,2,3,1.1,0,">1 nonsynonymous","S69P T100N G117W I142L",4
"lib2","SARS-CoV-2","TGGGCGCATATTGAGA",6,137.42,10.26,-0.57,0.04,2.82,1.08,0,">1 nonsynonymous","A33T G83M K128L V173L",4
"lib2","SARS-CoV-2","TGGGCTAGGTCAGTAA",1,15.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21T K56N I80E Y143M Y159H G166M",6
"lib2","SARS-CoV-2","TGGGCTAGTAGTGCGT",7,86.25,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N58V D97V R127L C150M",4
"lib2","SARS-CoV-2","TGGGCTATATTAAAAA",1,17.45,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","D59R D98H A105Q S113P Y143Q",5
"lib2","SARS-CoV-2","TGGGCTCCATTTTAAG",6,133.23,10.3,-0.54,0.03,2.91,1.11,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","TGGGCTCCCTGGAACT",4,34.81,10.82,-0.02,0.07,2.95,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGGCTGTATCCCCAG",2,32.29,6.83,-4.01,0.49,1.5,1.18,0.05,">1 nonsynonymous","C31H Y91V V103I D137A L187S",5
"lib2","SARS-CoV-2","TGGGGAACAAACTTTC",1,6.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14H V20E K132T Q176V Y178F",5
"lib2","SARS-CoV-2","TGGGGAACAATGACCT",19,200.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V11S N107A N120F T170F",4
"lib2","SARS-CoV-2","TGGGGAATAGAACACA",4,31.42,7.85,-2.99,0.24,1.5,1.08,0.02,">1 nonsynonymous","F12I S41L N64L L95C",4
"lib2","SARS-CoV-2","TGGGGACTAAACACGG",1,39.54,10.41,-0.43,0.06,3,1.06,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","TGGGGATAGGATTGAC",5,2.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27T V103S G146Q V153M",4
"lib2","SARS-CoV-2","TGGGGATCACCAGTTC",2,26.68,8.99,-1.85,0.21,1.83,1.05,0.02,">1 nonsynonymous","G9S R16G Y21V F44N T55N",5
"lib2","SARS-CoV-2","TGGGGCCAGTCAGACC",5,21.94,8.7,-2.13,0.43,1.89,1.36,0.06,">1 nonsynonymous","N13I S139M",2
"lib2","SARS-CoV-2","TGGGGCCCTTGGCGAT",4,0.14,NA,NA,NA,NA,NA,NA,"stop","N1P S53P N107L G146Y S184*",5
"lib2","SARS-CoV-2","TGGGGCCTAAAAATGG",15,273.76,8.06,-2.78,0.13,1.98,1.08,0.01,">1 nonsynonymous","N58S N120G K128A T140L G146K",5
"lib2","SARS-CoV-2","TGGGGCGAGGTGGAAC",4,152.2,9.43,-1.4,0.05,2.73,1.09,0,"1 nonsynonymous","P177S",1
"lib2","SARS-CoV-2","TGGGGGAATAAGGCCA",1,33.95,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","W106C Y143G",2
"lib2","SARS-CoV-2","TGGGGGACCGCTATGT",12,32.89,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14T V103S I138S",3
"lib2","SARS-CoV-2","TGGGGGCAATCATATA",21,89.08,6.38,-4.46,0.53,1.5,1.23,0.02,">1 nonsynonymous","E76G I88V S139Y T201R",4
"lib2","SARS-CoV-2","TGGGGTAATCCATGCA",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58C V71K F99R",3
"lib2","SARS-CoV-2","TGGGGTACCGAAGTTC",10,2.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8H T63N T100Q",3
"lib2","SARS-CoV-2","TGGGGTCAGAAAAAAC",3,79.13,8.54,-2.29,0.19,1.5,1,0.01,">1 nonsynonymous","R25E K56T N130G",3
"lib2","SARS-CoV-2","TGGGGTCAGATGAAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","A33P F62S P82T K87L N92* I104K P197A",7
"lib2","SARS-CoV-2","TGGGGTCATCAAAATC",1,5.15,6.81,-4.03,0.25,2.28,1.07,0.02,">1 nonsynonymous","S129T Y165I G174I H189N",4
"lib2","SARS-CoV-2","TGGGGTCCGCGAGAAA",10,118.18,9.62,-1.22,0.13,1.71,1.08,0.01,">1 nonsynonymous","F17T N151L",2
"lib2","SARS-CoV-2","TGGGGTGGAATAATGA",2,16.51,9.09,-1.74,0.18,1.52,1.03,0.01,">1 nonsynonymous","F12T D59L",2
"lib2","SARS-CoV-2","TGGGGTGTGGTTATTT",4,72.57,10.81,-0.03,0.06,2.93,1.08,0,"1 nonsynonymous","T148R",1
"lib2","SARS-CoV-2","TGGGGTTAAAACAGAA",7,93.26,10.65,-0.19,0.04,2.87,1.1,0,"1 nonsynonymous","Y123L",1
"lib2","SARS-CoV-2","TGGGGTTCTTACGTCA",8,69.44,7.55,-3.28,0.2,1.5,1.07,0.01,">1 nonsynonymous","A105Q Y119M",2
"lib2","SARS-CoV-2","TGGGGTTTCGCAATAG",7,26.67,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","A22Y Y66V A89E W106S T170M T201K",6
"lib2","SARS-CoV-2","TGGGTAACTTAATGCG",1,20.7,8.46,-2.38,0.33,1.5,1,0.04,">1 nonsynonymous","A105V R136N",2
"lib2","SARS-CoV-2","TGGGTAACTTATTCTG",8,32.75,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","C61W K94A S108M G146C G152I S200N",6
"lib2","SARS-CoV-2","TGGGTAAGGACAGAAC",10,110.28,8.61,-2.23,0.14,1.61,1.1,0.01,">1 nonsynonymous","L162K G174A",2
"lib2","SARS-CoV-2","TGGGTAATAAGAGGAT",19,77.12,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","Y91S G101V T170L",3
"lib2","SARS-CoV-2","TGGGTAATGAATATAA",4,0.21,NA,NA,NA,NA,NA,NA,"stop","K26Y V37L V71A T170F Q176*",5
"lib2","SARS-CoV-2","TGGGTACCTTAAGAAC",4,88.08,9.08,-1.75,0.14,1.69,1.13,0.01,">1 nonsynonymous","E135R Y178V",2
"lib2","SARS-CoV-2","TGGGTACGTACCCCCT",9,902.58,9.52,-1.31,0.06,2.45,1.02,0,">1 nonsynonymous","D90F K114V V173G L187T T201G",5
"lib2","SARS-CoV-2","TGGGTACTATACCCAT",1,22.85,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","F44T I88G S129A",3
"lib2","SARS-CoV-2","TGGGTAGCTTCTGTAT",6,80.56,10.77,-0.07,0.04,2.92,1.09,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","TGGGTATAAGGGAGAT",9,2.47,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TGGGTATCATCTTTCA",9,38.64,9.8,-1.04,0.18,1.77,1.1,0.01,"1 nonsynonymous","D137T",1
"lib2","SARS-CoV-2","TGGGTATGAGCTAACG",1,59.52,10.76,-0.08,0.04,2.9,1.1,0,"1 nonsynonymous","S41A",1
"lib2","SARS-CoV-2","TGGGTCAAATACCTGT",6,23.36,6.3,-4.54,0.64,1.5,1.17,0.03,">1 nonsynonymous","T63Y R127Y",2
"lib2","SARS-CoV-2","TGGGTCAAATAGAGTG",4,12.72,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K56S D90F S113E I142H F160T",5
"lib2","SARS-CoV-2","TGGGTCAACAATGAAA",26,274.56,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14H I28K V37F T55Y Q144L C150M",6
"lib2","SARS-CoV-2","TGGGTCACAAGGGAGG",10,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y A33I V103F Y165L",4
"lib2","SARS-CoV-2","TGGGTCACAGGCGCTA",11,22.59,7.79,-3.05,0.31,1.5,1.17,0.04,">1 nonsynonymous","D59R W106S S139R",3
"lib2","SARS-CoV-2","TGGGTCATAACCAGAA",9,1.5,NA,NA,NA,NA,NA,NA,"stop","N4S S36A D68K Y91*",4
"lib2","SARS-CoV-2","TGGGTCCAATATGCGA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L T100Y N107S",3
"lib2","SARS-CoV-2","TGGGTCCGAACATATC",8,8.06,NA,NA,NA,NA,NA,NA,"stop","G86F V115* G146W",3
"lib2","SARS-CoV-2","TGGGTCGGGACACCGT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","F44N K48S G155*",3
"lib2","SARS-CoV-2","TGGGTCTCGCACTACC",10,1.9,NA,NA,NA,NA,NA,NA,"stop","R27G T100M K128*",3
"lib2","SARS-CoV-2","TGGGTCTGACTTACTG",1,23.26,8.86,-1.98,0.24,2.48,1.01,0.03,">1 nonsynonymous","D90T S164D",2
"lib2","SARS-CoV-2","TGGGTCTTGCCACCGC",3,75.19,10.97,0.13,0.05,2.96,1.05,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","TGGGTGAAACTTAGAT",15,227.27,10.87,0.03,0.06,2.94,1.06,0,"1 nonsynonymous","P197Q",1
"lib2","SARS-CoV-2","TGGGTGACATAACACC",4,1.92,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib2","SARS-CoV-2","TGGGTGCGTCACCAAT",1,18.81,10.81,-0.02,0.07,2.94,1.08,0.01,"1 nonsynonymous","C61K",1
"lib2","SARS-CoV-2","TGGGTGGTGTGGCAAA",3,128.44,8.58,-2.26,0.08,2.31,1.09,0,">1 nonsynonymous","K56L A89T Y119V",3
"lib2","SARS-CoV-2","TGGGTGTCCTTTCTTC",2,12.6,10.66,-0.17,0.1,2.87,1.13,0.01,"1 nonsynonymous","P149V",1
"lib2","SARS-CoV-2","TGGGTGTTCAGGAAAA",3,18.35,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","L95D",1
"lib2","SARS-CoV-2","TGGGTTAAGTTAAATA",7,73.35,6,-4.84,1.82,2.24,1.13,0,">1 nonsynonymous","T3K G9T W23S D59S R127L",5
"lib2","SARS-CoV-2","TGGGTTATGTGGATCA",11,152.88,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23Q Y39A R124L S139R",4
"lib2","SARS-CoV-2","TGGGTTCTATAGGGAT",11,104.39,8.5,-2.34,0.13,1.94,1.15,0.01,">1 nonsynonymous","A14F G116V",2
"lib2","SARS-CoV-2","TGGGTTGAATGATACA",11,209.37,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y35L G51N G74A Y91C N107F",5
"lib2","SARS-CoV-2","TGGGTTGTAAGTGAAT",1,6.76,10.12,-0.72,0.18,2.35,1.02,0.01,">1 nonsynonymous","K56V S139L T201S",3
"lib2","SARS-CoV-2","TGGGTTGTCGGTCATT",9,40.91,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","T85R D90N V103Y C150F N151K",5
"lib2","SARS-CoV-2","TGGGTTTTAGTAGACA",2,0.37,NA,NA,NA,NA,NA,NA,"stop","L5P F44W D112W F126*",4
"lib2","SARS-CoV-2","TGGTAAAACCGAACCT",1,20.35,9.73,-1.11,0.15,1.93,1.07,0.01,">1 nonsynonymous","S29W D98F K114L",3
"lib2","SARS-CoV-2","TGGTAAAACGATGTTA",2,11.71,7.69,-3.15,0.19,1.5,1.04,0.03,">1 nonsynonymous","V65F I142N G174W",3
"lib2","SARS-CoV-2","TGGTAAAAGTACGAAT",1,0.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T A81M",2
"lib2","SARS-CoV-2","TGGTAAACTTGCCGAT",1,10.81,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","N4W K87A N92Q L131E",4
"lib2","SARS-CoV-2","TGGTAAAGAACTAACA",14,159.58,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K87F E154I G172I",3
"lib2","SARS-CoV-2","TGGTAAAGGGTATGTT",1,6.62,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y35R Y93K F134T",3
"lib2","SARS-CoV-2","TGGTAAAGGTGAAGTC",1,1.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88R F99S G155V Y165Q",4
"lib2","SARS-CoV-2","TGGTAAATGGATACTG",12,95.33,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W23K A89L R179M",3
"lib2","SARS-CoV-2","TGGTAACAAAGTCCGA",5,43.02,10.35,-0.48,0.03,2.93,1.06,0,"1 nonsynonymous","A145T",1
"lib2","SARS-CoV-2","TGGTAACAATGAGACA",19,54.32,6,-4.84,2,1.5,1.35,0.06,">1 nonsynonymous","K56S I104R E135T",3
"lib2","SARS-CoV-2","TGGTAACACAGCGCCT",4,2.53,NA,NA,NA,NA,NA,NA,"stop","Y39D C49D T63*",3
"lib2","SARS-CoV-2","TGGTAACATGTCTTTG",6,30.21,6,-4.84,2,3,1.11,0,">1 nonsynonymous","G9L S113F V181T",3
"lib2","SARS-CoV-2","TGGTAACGAACCGTGA",8,13.85,6,-4.84,1.44,1.5,1.16,0.03,">1 nonsynonymous","N13G S19V T85R Q144L E154S",5
"lib2","SARS-CoV-2","TGGTAACGATTAATAA",2,17.64,9.77,-1.07,0.14,2.3,1,0.01,">1 nonsynonymous","V77R K132S",2
"lib2","SARS-CoV-2","TGGTAACGTTGATCAA",5,41.6,6,-4.84,2,3,1.17,0,">1 nonsynonymous","Y39E L57W D90I W106K R136E T148F",6
"lib2","SARS-CoV-2","TGGTAACTACAACCCT",1,8.16,8.56,-2.28,0.24,1.82,1.09,0.03,">1 nonsynonymous","K26M I28M L95F",3
"lib2","SARS-CoV-2","TGGTAACTTCTGTAAA",2,7.26,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","I2E L38K S45K F167T T201S",5
"lib2","SARS-CoV-2","TGGTAACTTTAGAATA",1,5.01,6.65,-4.19,0.58,1.5,1,0.03,">1 nonsynonymous","V77P P82Q W106A",3
"lib2","SARS-CoV-2","TGGTAACTTTGCGTAG",2,15.6,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V103M N107M E141A",3
"lib2","SARS-CoV-2","TGGTAAGTAACACTGT",3,0.14,NA,NA,NA,NA,NA,NA,"stop","N13K I138A P161L T201*",4
"lib2","SARS-CoV-2","TGGTAATACCATAGTC",3,34.48,10.89,0.06,0.06,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGTAATAGAAACAGC",12,8.02,NA,NA,NA,NA,NA,NA,"stop","K94V W106* Q163T",3
"lib2","SARS-CoV-2","TGGTAATAGCTGTAAA",5,93.37,10.58,-0.25,0.03,2.95,1.07,0,">1 nonsynonymous","I2G P54C",2
"lib2","SARS-CoV-2","TGGTAATATCTAGGGA",3,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K N13I D59C Y93D K132N",5
"lib2","SARS-CoV-2","TGGTAATTAGTTTGAC",2,30.7,10.8,-0.04,0.07,2.96,1.06,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","TGGTAATTATAAGGAT",5,44.47,6,-4.84,2,3,1.14,0,">1 nonsynonymous","C6M W106M C158S Q176R",4
"lib2","SARS-CoV-2","TGGTAATTTATTTGAG",1,11.08,6,-4.84,2,3,1.07,0.01,">1 nonsynonymous","I28P I88P C150Y Y159H",4
"lib2","SARS-CoV-2","TGGTACAAACAATCAG",4,65.32,6.02,-4.81,0.8,1.5,1.15,0.01,">1 nonsynonymous","C49V A81S V181C",3
"lib2","SARS-CoV-2","TGGTACAAATGCAAAT",3,35.36,8.5,-2.34,0.15,3,1.05,0.01,">1 nonsynonymous","G117C F156H",2
"lib2","SARS-CoV-2","TGGTACAAGAAAATTT",1,0.2,NA,NA,NA,NA,NA,NA,"stop","P82G T100S A190E A192* T201V",5
"lib2","SARS-CoV-2","TGGTACAAGATTTTAA",1,48.27,10.79,-0.04,0.03,2.99,1.02,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","TGGTACAAGTAACCCC",2,0.96,NA,NA,NA,NA,NA,NA,"stop","C61S I72Y F99I N120S K132* F156V",6
"lib2","SARS-CoV-2","TGGTACAATTACATTT",4,17.41,6,-4.84,2,1.5,1.2,0.07,">1 nonsynonymous","D34Y C61K V77S Y159G",4
"lib2","SARS-CoV-2","TGGTACAGCCATCTGT",7,185.93,10.51,-0.33,0.04,2.88,1.09,0,">1 nonsynonymous","S41I T63R L122R P149R N151Q",5
"lib2","SARS-CoV-2","TGGTACATGACCCAAA",6,59.57,6,-4.84,2,2.07,1.23,0.01,">1 nonsynonymous","F12L K26V V103W Y119F F160P K199M",6
"lib2","SARS-CoV-2","TGGTACATTAAAACAC",4,23.63,6,-4.84,1.88,1.5,1.11,0.01,">1 nonsynonymous","S41R D90R S113L",3
"lib2","SARS-CoV-2","TGGTACCAGCACCATT",2,3.36,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V103K",1
"lib2","SARS-CoV-2","TGGTACCAGGGCGAGG",17,64.26,7.45,-3.39,0.44,1.5,1.17,0.07,">1 nonsynonymous","N13I D97V P133E",3
"lib2","SARS-CoV-2","TGGTACGCATAGGAGA",1,17.71,9.68,-1.16,0.13,2.13,1.08,0.01,">1 nonsynonymous","S41F D59H K87Y K94F P197M",5
"lib2","SARS-CoV-2","TGGTACGGGGATTCTG",1,6.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30A S43Y K48R D97F K128W G172F",6
"lib2","SARS-CoV-2","TGGTACGTATGTTTCA",7,80.51,9.99,-0.85,0.04,2.92,1.06,0,">1 nonsynonymous","I88V S129E G174R",3
"lib2","SARS-CoV-2","TGGTACTAAAATGTCT",3,31.37,9.67,-1.17,0.14,1.76,1,0.01,"1 nonsynonymous","L131Y",1
"lib2","SARS-CoV-2","TGGTACTACGACTTAT",2,16.92,10.91,0.08,0.07,2.91,1.07,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGGTACTCGAGAGGCC",5,43.76,10.98,0.15,0.06,2.92,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGTACTTACGTGTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","N1G P7* F17I N107V S139C",5
"lib2","SARS-CoV-2","TGGTAGACCCGAGTAG",6,24.59,7.01,-3.83,0.44,1.5,1.27,0.04,">1 nonsynonymous","Y50D T201R",2
"lib2","SARS-CoV-2","TGGTAGAGAATCAAAC",4,197.26,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","N120T F126E T201S",3
"lib2","SARS-CoV-2","TGGTAGAGGTTCTACA",2,21.91,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","S45P D98F A105K L122N",4
"lib2","SARS-CoV-2","TGGTAGATACTAGCCA",11,183.44,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A18R F44P N92D S200T",4
"lib2","SARS-CoV-2","TGGTAGATCAGCCTAA",7,0.92,NA,NA,NA,NA,NA,NA,"stop","F8L Y35* G116M G166A K198*",5
"lib2","SARS-CoV-2","TGGTAGATTTATCTCA",7,163.58,9.49,-1.34,0.07,1.92,1.07,0,">1 nonsynonymous","L38K T148A Q163S",3
"lib2","SARS-CoV-2","TGGTAGCCAACACGAC",5,70.89,10.67,-0.17,0.04,2.92,1.05,0,">1 nonsynonymous","Y35I D59H G83S",3
"lib2","SARS-CoV-2","TGGTAGCCCCAATTAC",1,52.75,6.09,-4.75,0.37,3,1.15,0,">1 nonsynonymous","N4T A18L V180F",3
"lib2","SARS-CoV-2","TGGTAGCGAAGTAGTA",8,47.57,9.78,-1.06,0.11,1.99,1.12,0.01,">1 nonsynonymous","T55I P96K",2
"lib2","SARS-CoV-2","TGGTAGCTGCCACTAA",8,180.99,8.9,-1.93,0.08,2.77,1.04,0,">1 nonsynonymous","Y91V Y119K",2
"lib2","SARS-CoV-2","TGGTAGGATGTGAAAC",1,12.27,7.79,-3.04,0.49,1.5,1.26,0.07,">1 nonsynonymous","R27V T63S V103K",3
"lib2","SARS-CoV-2","TGGTAGTCCCCGAATA",1,19.51,7.2,-3.63,0.18,1.5,1.12,0.01,">1 nonsynonymous","F44A P149Q P161Q",3
"lib2","SARS-CoV-2","TGGTAGTTCTGAAATC",7,20.2,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","T3D R124Q G174W",3
"lib2","SARS-CoV-2","TGGTATACATCTCGCC",3,31.02,7.8,-3.04,0.15,1.51,1.04,0.01,">1 nonsynonymous","Y35M T100A N109P L122H",4
"lib2","SARS-CoV-2","TGGTATATCATGCAAG",5,1.97,NA,NA,NA,NA,NA,NA,"stop","D59A K87* L95Y R127H T201*",5
"lib2","SARS-CoV-2","TGGTATATTCTCTACG",10,86.93,9.7,-1.14,0.1,1.94,1.09,0,">1 nonsynonymous","P7G A22R W106R",3
"lib2","SARS-CoV-2","TGGTATCATACAATGT",2,6.37,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","A42F D90Y V103P E141M",4
"lib2","SARS-CoV-2","TGGTATCGCATTCGAG",8,108.92,10.7,-0.14,0.04,2.92,1.1,0,">1 nonsynonymous","G51N F62L K198G",3
"lib2","SARS-CoV-2","TGGTATGAAATTAATC",4,13.38,NA,NA,NA,NA,NA,0.13,"1 nonsynonymous","D112M",1
"lib2","SARS-CoV-2","TGGTATGATAAATCTT",3,30.74,7.8,-3.04,0.16,1.5,1.08,0.01,">1 nonsynonymous","E10S Y35S C102T S113V Y123M Y143F L183F",7
"lib2","SARS-CoV-2","TGGTATGGTGTCCATA",6,70.68,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","A33L A105N G172Y",3
"lib2","SARS-CoV-2","TGGTATTAATCATTAC",1,26.91,10.77,-0.07,0.07,2.93,1.07,0,"1 nonsynonymous","V173H",1
"lib2","SARS-CoV-2","TGGTATTCCTATGGGG",7,34.53,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","R16I S41K F99A",3
"lib2","SARS-CoV-2","TGGTATTTAAGCATAA",5,87.23,8.96,-1.87,0.06,2.94,1.08,0,">1 nonsynonymous","N4V F126T T201S",3
"lib2","SARS-CoV-2","TGGTCAAATTCCGTTC",1,35.19,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W23T Y119L G174W",3
"lib2","SARS-CoV-2","TGGTCAAGTAGCAATT",11,221.14,10.33,-0.51,0.03,2.93,1.03,0,">1 nonsynonymous","L60V N151I",2
"lib2","SARS-CoV-2","TGGTCAATAACAGCTA",5,35.23,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","D90F N107R E135T E141I",4
"lib2","SARS-CoV-2","TGGTCACAATACTTAT",4,131.91,10.56,-0.28,0.04,2.96,1.04,0,">1 nonsynonymous","Y121L T201L",2
"lib2","SARS-CoV-2","TGGTCACACATCTATA",1,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F62E",1
"lib2","SARS-CoV-2","TGGTCACCCCTCCTGG",6,26.52,6.83,-4,0.24,1.5,1.11,0.01,">1 nonsynonymous","A14R W23M C61T",3
"lib2","SARS-CoV-2","TGGTCACGGACTTTTT",1,10.37,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S45I L95Y G101T",3
"lib2","SARS-CoV-2","TGGTCACTGCAATGTA",3,99.67,9.87,-0.97,0.07,2.23,1.03,0,"1 nonsynonymous","Y50T",1
"lib2","SARS-CoV-2","TGGTCAGACGTTTTCC",1,5.94,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","L5M V77Q G101T N110R E141N",5
"lib2","SARS-CoV-2","TGGTCAGCTATTCGAA",3,11.99,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","I28G K114D Y123P G155I",4
"lib2","SARS-CoV-2","TGGTCAGTCACTCCCA",3,45.25,10.75,-0.09,0.06,2.87,1.11,0,"1 nonsynonymous","E10A",1
"lib2","SARS-CoV-2","TGGTCATCTAAGATAA",5,97.35,6.11,-4.73,1.1,1.5,1.15,0.03,">1 nonsynonymous","Y66A G86N Y121L",3
"lib2","SARS-CoV-2","TGGTCCCCAACCATAA",18,324.5,10.89,0.05,0.06,2.88,1.12,0,"1 nonsynonymous","V173K",1
"lib2","SARS-CoV-2","TGGTCCCGAATCGTGT",16,76.34,6,-4.84,2,1.5,1.31,0.03,">1 nonsynonymous","D112W S139D",2
"lib2","SARS-CoV-2","TGGTCCCTTGAAGCCC",4,77.09,9.84,-0.99,0.06,2.17,1,0,">1 nonsynonymous","T55S F99L E141R",3
"lib2","SARS-CoV-2","TGGTCCGAAAATTCAC",4,5.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15C Y21W A105K",3
"lib2","SARS-CoV-2","TGGTCCGCGACTAATG",3,8.57,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","S41T D97C C102S",3
"lib2","SARS-CoV-2","TGGTCCGGTAACGAAA",4,49.51,10.89,0.05,0.06,2.99,1.01,0,">1 nonsynonymous","N1C N130Q P197H",3
"lib2","SARS-CoV-2","TGGTCCGTACTCCTCG",1,12.78,10.6,-0.24,0.06,3,1.02,0,">1 nonsynonymous","E10N V173Q",2
"lib2","SARS-CoV-2","TGGTCCGTATCAGGCA",6,105.09,6.13,-4.7,0.85,1.5,1.17,0.02,">1 nonsynonymous","D34P S41F C61V L122T Q176V",5
"lib2","SARS-CoV-2","TGGTCCTGTATTCTAA",5,3.47,NA,NA,NA,NA,NA,NA,"stop","C6* V37R V115D Q144K",4
"lib2","SARS-CoV-2","TGGTCGAAAGTAGCAA",8,132.18,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A18R S43K C150S P177E",4
"lib2","SARS-CoV-2","TGGTCGAAGTCAGAAA",5,13.27,9.91,-0.93,0.21,1.64,1,0.02,">1 nonsynonymous","A22V D59A F62S",3
"lib2","SARS-CoV-2","TGGTCGAGACTAACAC",4,5.04,9.53,-1.31,0.32,1.82,1.21,0.02,">1 nonsynonymous","N13L Y91L K132M",3
"lib2","SARS-CoV-2","TGGTCGATAGGTGGGA",1,13.08,8.88,-1.96,0.34,1.5,1,0.04,">1 nonsynonymous","N64L P161V",2
"lib2","SARS-CoV-2","TGGTCGCAGCATGCAA",1,1.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V S45T I142F C150S",4
"lib2","SARS-CoV-2","TGGTCGCATCACCCAC",3,85.82,10.6,-0.23,0.04,3,1,0,">1 nonsynonymous","L5S Y66L L95V",3
"lib2","SARS-CoV-2","TGGTCGCCCCCAAATA",2,0.34,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TGGTCGCGGAAGTCCT",2,0.24,NA,NA,NA,NA,NA,NA,"stop","C61V L131*",2
"lib2","SARS-CoV-2","TGGTCGCTAATTCGAC",5,6.94,NA,NA,NA,NA,NA,NA,"stop","A14* V20G G86C D112G Y121L I138S",6
"lib2","SARS-CoV-2","TGGTCGGGACAAATTC",6,46.69,9.15,-1.69,0.11,2.47,1.12,0.01,">1 nonsynonymous","I2K I104M G116C T140S",4
"lib2","SARS-CoV-2","TGGTCGGTGAGGGCAT",3,33.71,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N92T N107G P149R T170Y",4
"lib2","SARS-CoV-2","TGGTCTACCTTAATTT",6,129.9,9.86,-0.98,0.06,2.2,1.11,0,">1 nonsynonymous","A81L K128S",2
"lib2","SARS-CoV-2","TGGTCTACGAAAGTGC",11,111.73,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A81L L131Y",2
"lib2","SARS-CoV-2","TGGTCTACGGATAAAA",1,1.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38P I142W Y165L",3
"lib2","SARS-CoV-2","TGGTCTAGCCCGTAGT",1,36.85,10.55,-0.28,0.03,2.97,1.04,0,"1 nonsynonymous","S19N",1
"lib2","SARS-CoV-2","TGGTCTCAACAGAGAA",7,58.78,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G83H L95M E141K V181E",4
"lib2","SARS-CoV-2","TGGTCTTAGGTTGAAG",3,37.52,7.38,-3.46,0.15,1.74,1.08,0.01,">1 nonsynonymous","S113P P169N",2
"lib2","SARS-CoV-2","TGGTCTTATCAAAAAA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113G K128I",2
"lib2","SARS-CoV-2","TGGTCTTGAGACCATT",3,24.89,6.8,-4.03,0.4,1.5,1.05,0.02,">1 nonsynonymous","A14Y N157L P197A",3
"lib2","SARS-CoV-2","TGGTGAAGAGAAACCC",3,0,NA,NA,NA,NA,NA,NA,"stop","N107L Y165* Y175R A192S",4
"lib2","SARS-CoV-2","TGGTGAATAACACAGT",7,0.94,NA,NA,NA,NA,NA,NA,"stop","P54D Y143* V173T V180I",4
"lib2","SARS-CoV-2","TGGTGACCACATGGCT",2,18.76,8.02,-2.82,0.17,2.37,1,0.01,">1 nonsynonymous","C6S T55L Y119L",3
"lib2","SARS-CoV-2","TGGTGAGGCCAAGTGC",3,35.52,10.4,-0.44,0.09,2.47,1,0,">1 nonsynonymous","S53G Y123L",2
"lib2","SARS-CoV-2","TGGTGATATGGGCCAC",4,63.48,9.7,-1.14,0.04,2.87,1.1,0,"1 nonsynonymous","T170F",1
"lib2","SARS-CoV-2","TGGTGATCACCTAACA",3,42.06,9.47,-1.37,0.07,2.48,1.06,0,">1 nonsynonymous","T3R L57V K87S",3
"lib2","SARS-CoV-2","TGGTGCAATAGTGGGA",6,13.05,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T15N S19M K56L Y91G W106R P149T",6
"lib2","SARS-CoV-2","TGGTGCAGGCATGACA",1,5.75,9.5,-1.34,0.19,2.16,1,0.02,"1 nonsynonymous","C49Y",1
"lib2","SARS-CoV-2","TGGTGCCCAAGGTAAG",1,6.17,6.17,-4.66,0.79,2.45,1.26,0.02,">1 nonsynonymous","T15P W23M I142R P149S Y165S",5
"lib2","SARS-CoV-2","TGGTGCCTTGAACTGA",7,0.27,NA,NA,NA,NA,NA,NA,"stop","K48* G83* P161S T170Q Q176R",5
"lib2","SARS-CoV-2","TGGTGCGAAATGCGAG",5,129,6.08,-4.76,0.53,1.5,1.15,0.01,">1 nonsynonymous","S45R R73Y N110S",3
"lib2","SARS-CoV-2","TGGTGCGCATCGCTAT",7,93.53,9.53,-1.31,0.05,2.81,1.16,0,"1 nonsynonymous","F156C",1
"lib2","SARS-CoV-2","TGGTGCGGATTTAGTT",3,167.18,10.72,-0.11,0.03,2.93,1.07,0,">1 nonsynonymous","Y121F S129D",2
"lib2","SARS-CoV-2","TGGTGCTGAAAGTGTA",7,216.04,9.63,-1.21,0.11,2.75,1.12,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","TGGTGCTTCTCATCAG",6,55.44,9.97,-0.87,0.11,2.54,1.01,0.01,">1 nonsynonymous","N4Y T15R Y39C",3
"lib2","SARS-CoV-2","TGGTGGAAAAAGTAAA",6,136.55,10.71,-0.12,0.03,2.93,1.05,0,"1 nonsynonymous","A42Y",1
"lib2","SARS-CoV-2","TGGTGGACGTGCCGAT",5,20.14,10.02,-0.81,0.13,2.31,1.01,0.01,"1 nonsynonymous","C49V",1
"lib2","SARS-CoV-2","TGGTGGATAATGTGAA",2,14.8,8.59,-2.25,0.14,2.03,1.04,0.01,">1 nonsynonymous","L5N D137A A190V",3
"lib2","SARS-CoV-2","TGGTGGCAAAATATAC",22,342.03,10.83,-0.01,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGTGGCATAACACAT",2,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99A L122D",2
"lib2","SARS-CoV-2","TGGTGGGTATGAGTCT",1,36.75,10.84,0,0.08,2.98,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGGTGGTCCTATAAAA",7,83.34,10.46,-0.37,0.03,2.92,1,0,">1 nonsynonymous","T15G T148R",2
"lib2","SARS-CoV-2","TGGTGGTGTTGCATGT",5,56.02,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","L60D I80L D90P L162S Y178Q T201L",6
"lib2","SARS-CoV-2","TGGTGTCAACACCTTA",6,107.74,10.59,-0.24,0.03,2.97,1.05,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","TGGTGTCAATCCAAAT",3,1.41,NA,NA,NA,NA,NA,NA,"stop","Y35H L57M N107T K132S S139Y E141*",6
"lib2","SARS-CoV-2","TGGTGTCACATGCACC",1,0.18,NA,NA,NA,NA,NA,NA,"stop","L5S F44* Y123E P177L",4
"lib2","SARS-CoV-2","TGGTGTGAACCAAACC",6,0.38,NA,NA,NA,NA,NA,NA,"stop","E10V Y93*",2
"lib2","SARS-CoV-2","TGGTGTTAATAGTATA",4,22.24,6.77,-4.06,0.45,1.5,1.11,0.05,">1 nonsynonymous","I88V P149H C158I",3
"lib2","SARS-CoV-2","TGGTGTTATTTAAGTA",4,3.53,NA,NA,NA,NA,NA,NA,"stop","A14K A33C A42M T63*",4
"lib2","SARS-CoV-2","TGGTGTTTGAGTGCTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G51I G117I L122F G166*",4
"lib2","SARS-CoV-2","TGGTTAACAACCATGT",8,39.1,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","F8H F44C Y50E L60I D90Y V153A",6
"lib2","SARS-CoV-2","TGGTTAACATTAAAAA",2,38.56,9.47,-1.37,0.19,2.01,1.1,0.02,">1 nonsynonymous","T3M A14L A22Y",3
"lib2","SARS-CoV-2","TGGTTAACATTCTGAT",1,5.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28S L95F N157T P191S",4
"lib2","SARS-CoV-2","TGGTTAACTACGTAAA",9,81.38,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V77W D112H",2
"lib2","SARS-CoV-2","TGGTTAATGACCTATG",2,12.94,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","F44R N92Y Q168L",3
"lib2","SARS-CoV-2","TGGTTAATTTCCATTT",12,40.55,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6V T100P",2
"lib2","SARS-CoV-2","TGGTTACAATTACAGG",8,404.28,10.79,-0.04,0.03,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TGGTTACCAGGGCGAT",9,171.45,10.71,-0.13,0.03,2.96,1.05,0,">1 nonsynonymous","D90W N130V Y178H",3
"lib2","SARS-CoV-2","TGGTTACCGATGCAGG",17,343.25,9.21,-1.62,0.02,2.92,1.07,0,"1 nonsynonymous","G174I",1
"lib2","SARS-CoV-2","TGGTTACTTATACATA",2,47.24,10.19,-0.64,0.05,3,1.01,0,"1 nonsynonymous","G155D",1
"lib2","SARS-CoV-2","TGGTTAGACCATAGAT",5,122.15,10.21,-0.63,0.05,2.75,1.01,0,">1 nonsynonymous","L57F D98H T201K",3
"lib2","SARS-CoV-2","TGGTTAGACCTAGATT",5,33.39,6,-4.84,1.27,2.01,1.15,0.01,">1 nonsynonymous","I88G N120G",2
"lib2","SARS-CoV-2","TGGTTAGCATAGTTGT",3,8.04,10.76,-0.08,0.09,3,1,0,"1 nonsynonymous","C61Y",1
"lib2","SARS-CoV-2","TGGTTAGCATATATAG",2,72.55,9.42,-1.42,0.09,2.88,1.06,0,">1 nonsynonymous","N4G C61Q N120T",3
"lib2","SARS-CoV-2","TGGTTAGGAAATCCAA",3,36.49,8.94,-1.89,0.22,1.53,1.1,0.02,"1 nonsynonymous","L183Y",1
"lib2","SARS-CoV-2","TGGTTAGTTAATTGAA",1,5.39,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","TGGTTATTATTATGAT",5,127.4,10.55,-0.29,0.04,2.89,1.08,0,">1 nonsynonymous","R27L D98K S184V K198V",4
"lib2","SARS-CoV-2","TGGTTCACCCATCACA",2,5.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14I K198R",2
"lib2","SARS-CoV-2","TGGTTCACTTAATATT",5,163.55,10.54,-0.29,0.05,2.87,1.08,0,"1 nonsynonymous","D90Y",1
"lib2","SARS-CoV-2","TGGTTCCAAAAGAAAC",2,2.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77T P82K D90Y N107I G174T",5
"lib2","SARS-CoV-2","TGGTTCCCCACAGCTT",5,2.05,NA,NA,NA,NA,NA,NA,"stop","G51P N64* D97I N151F Q168I",5
"lib2","SARS-CoV-2","TGGTTCCTCGCCTGGA",7,128.98,10.78,-0.06,0.03,2.96,1.06,0,"1 nonsynonymous","T140D",1
"lib2","SARS-CoV-2","TGGTTCCTCGTCATTC",2,12.5,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","E10M C49N Q144F",3
"lib2","SARS-CoV-2","TGGTTCCTGAAACAAA",2,32.8,8.69,-2.14,0.08,3,1.05,0,"1 nonsynonymous","N157E",1
"lib2","SARS-CoV-2","TGGTTCGTTTAACTAG",8,53.47,10.68,-0.15,0.04,3,1.02,0,"1 nonsynonymous","E135G",1
"lib2","SARS-CoV-2","TGGTTCGTTTAGCAAA",3,3.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W N107C V181T",3
"lib2","SARS-CoV-2","TGGTTCTAGAAAAACA",5,37.23,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E10R D90K P96L N120Y",4
"lib2","SARS-CoV-2","TGGTTCTATCAATGTG",8,1.47,NA,NA,NA,NA,NA,NA,"stop","F126* R136Q T201H",3
"lib2","SARS-CoV-2","TGGTTCTCAAGTGGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8S P82L",2
"lib2","SARS-CoV-2","TGGTTGAAAATCTATA",10,106.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3E S29M Y35P S45C D112H",5
"lib2","SARS-CoV-2","TGGTTGAACTTCGTAT",2,8.68,10.87,0.04,0.16,2.92,1.04,0.01,"1 nonsynonymous","R16L",1
"lib2","SARS-CoV-2","TGGTTGAATACATCTG",1,8.77,9.54,-1.3,0.16,2.04,1.13,0.01,">1 nonsynonymous","G86N S200F",2
"lib2","SARS-CoV-2","TGGTTGATAACGTAAT",10,44.65,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C31T P96L T148K",3
"lib2","SARS-CoV-2","TGGTTGATGTTCCACC",13,744.55,10.03,-0.81,0.05,2.71,1.02,0,"1 nonsynonymous","C6I",1
"lib2","SARS-CoV-2","TGGTTGCAGGGACAAA",1,24.36,9.75,-1.08,0.07,2.93,1.05,0,">1 nonsynonymous","K56M T170G",2
"lib2","SARS-CoV-2","TGGTTGCCACGCTAAC",6,5.31,NA,NA,NA,NA,NA,NA,"stop","I2L T15V F70G K94* F160L",5
"lib2","SARS-CoV-2","TGGTTGGATTAAAGGT",3,13.51,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","S41I G86L",2
"lib2","SARS-CoV-2","TGGTTGTAAAAAGCGG",6,0.05,NA,NA,NA,NA,NA,NA,"stop","Y21*",1
"lib2","SARS-CoV-2","TGGTTGTATGATGGAA",7,99.85,10.88,0.04,0.03,2.96,1.05,0,"1 nonsynonymous","L5Q",1
"lib2","SARS-CoV-2","TGGTTGTCAAGTAAAG",3,9.07,6,-4.84,2,3,1.33,0.02,">1 nonsynonymous","G101A I104T G146L K199C",4
"lib2","SARS-CoV-2","TGGTTGTTATAACAAA",3,46.92,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","E10V N40A G83S I88M G152D",5
"lib2","SARS-CoV-2","TGGTTGTTATTAGATA",15,166.06,10.17,-0.67,0.05,2.72,1.01,0,">1 nonsynonymous","F12I S41T Y123V",3
"lib2","SARS-CoV-2","TGGTTTAATTGACAAG",3,30.04,8.81,-2.03,0.1,2.73,1.26,0,"1 nonsynonymous","A145D",1
"lib2","SARS-CoV-2","TGGTTTACTCAAGATT",2,44.19,9.19,-1.65,0.05,3,1.03,0,"1 nonsynonymous","G166R",1
"lib2","SARS-CoV-2","TGGTTTCAAAAAATCC",4,25.39,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y35S T100P",2
"lib2","SARS-CoV-2","TGGTTTCAAAATCTAT",2,75.09,9.99,-0.85,0.07,2.5,1.03,0,">1 nonsynonymous","I2Y R136L G152S",3
"lib2","SARS-CoV-2","TGGTTTCAATCCGGCG",8,345.93,10.67,-0.17,0.02,2.95,1.05,0,"1 nonsynonymous","K56Y",1
"lib2","SARS-CoV-2","TGGTTTCCGAATAATG",2,14.96,10.6,-0.24,0.09,2.93,1.11,0,"1 nonsynonymous","P149I",1
"lib2","SARS-CoV-2","TGGTTTCCGAATGAAA",3,50.93,9.23,-1.6,0.09,2.25,1.06,0,">1 nonsynonymous","P133Y G174Y",2
"lib2","SARS-CoV-2","TGGTTTCGCAATAAAT",2,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I P7Q A89E G166K",4
"lib2","SARS-CoV-2","TGGTTTGCCGTACCAA",1,136.38,10.67,-0.17,0.04,2.88,1.13,0,">1 nonsynonymous","I2N G9R",2
"lib2","SARS-CoV-2","TGGTTTTAAACAGACG",23,336.61,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11G V32T V65L T85I G146E",5
"lib2","SARS-CoV-2","TGGTTTTAGGAACGAG",4,161.8,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N30A S41V L95S G152T P177R",5
"lib2","SARS-CoV-2","TGGTTTTGTCAAAATT",7,193.4,10.24,-0.59,0.04,2.84,1.05,0,">1 nonsynonymous","R27I N107A",2
"lib2","SARS-CoV-2","TGGTTTTTTTACGAAA",20,192.58,7.8,-3.04,0.14,1.67,1.17,0.01,">1 nonsynonymous","T140S G155Y G166D",3
"lib2","SARS-CoV-2","TGTAAAAAAAATCCAT",2,13.06,7.11,-3.72,0.18,1.5,1.01,0.01,">1 nonsynonymous","Y35M N107R F134V",3
"lib2","SARS-CoV-2","TGTAAAAAAAGACTCA",3,21.48,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T55D C61F Y93S",3
"lib2","SARS-CoV-2","TGTAAAAAAGTAACAC",2,0,NA,NA,NA,NA,NA,NA,"stop","V37N L95F D112E R136*",4
"lib2","SARS-CoV-2","TGTAAAAACAAATAAC",1,21.92,10.77,-0.07,0.05,3,1.02,0,">1 nonsynonymous","V52M C61S",2
"lib2","SARS-CoV-2","TGTAAAAACTATAATG",2,56.75,10.88,0.04,0.09,2.75,1.17,0,">1 nonsynonymous","T55L K128P",2
"lib2","SARS-CoV-2","TGTAAAAAGATGGTCT",10,48.46,6,-4.84,1.06,2.64,1.12,0,">1 nonsynonymous","F8K Y91R C102D",3
"lib2","SARS-CoV-2","TGTAAAAATAATACAA",3,37.93,9.57,-1.26,0.05,2.9,1.09,0,">1 nonsynonymous","T3G K56I V153D G174L",4
"lib2","SARS-CoV-2","TGTAAAACCTTTACCA",3,0.55,NA,NA,NA,NA,NA,NA,"stop","N151*",1
"lib2","SARS-CoV-2","TGTAAAACGCCGTTTG",2,90.55,10.18,-0.65,0.04,2.85,1.02,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","TGTAAAACGTTAATTT",6,33.74,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N40L G74F Y91M",3
"lib2","SARS-CoV-2","TGTAAAACTAATTCTA",9,52.41,6.14,-4.7,0.65,2.02,1.25,0.01,">1 nonsynonymous","N58I D90P F99S",3
"lib2","SARS-CoV-2","TGTAAAAGAAGAAACA",1,1.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41F K56R N120S G146V N157T Y165R",6
"lib2","SARS-CoV-2","TGTAAAAGAAGATTAT",1,15.28,9.15,-1.68,0.29,2.12,1.02,0.04,"1 nonsynonymous","G86T",1
"lib2","SARS-CoV-2","TGTAAAAGACGAATCG",9,57.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8T A14P W106Y",3
"lib2","SARS-CoV-2","TGTAAAAGCGCAGAGC",5,5.35,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","D90P I104S V181N",3
"lib2","SARS-CoV-2","TGTAAAAGGAACCATC",3,32.49,8.78,-2.06,0.05,2.93,1.06,0,">1 nonsynonymous","I28Y L60T G146V V173M",4
"lib2","SARS-CoV-2","TGTAAAAGGCGCATTA",14,131.97,6,-4.84,0.62,1.5,1.11,0,">1 nonsynonymous","L60V V65S Y159P A192C",4
"lib2","SARS-CoV-2","TGTAAAATAAACAGGA",1,4.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A67Y L122P V181P",3
"lib2","SARS-CoV-2","TGTAAAATCGCAAAAT",9,95.98,10.73,-0.11,0.04,2.99,1.03,0,">1 nonsynonymous","G9H C61Y",2
"lib2","SARS-CoV-2","TGTAAAATGAGTGTGC",2,35.47,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14S G74S N107T S139A G174V",5
"lib2","SARS-CoV-2","TGTAAAATGTTAAGCA",8,85.58,10,-0.84,0.04,2.82,1.08,0,"1 nonsynonymous","C6M",1
"lib2","SARS-CoV-2","TGTAAACAACATTGAA",7,28.96,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C61L V115M G172M",3
"lib2","SARS-CoV-2","TGTAAACAGCTATCCA",5,111.05,10.27,-0.56,0.04,2.91,1.07,0,">1 nonsynonymous","N110H G155I T201S",3
"lib2","SARS-CoV-2","TGTAAACATGCGAATC",5,127.85,9.3,-1.54,0.06,2.89,1.11,0,">1 nonsynonymous","R16V N157S",2
"lib2","SARS-CoV-2","TGTAAACCGCTAACTT",3,59.08,10.84,0,0.03,3,1.02,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","TGTAAACCTGATAGAG",5,46.61,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68G F99H",2
"lib2","SARS-CoV-2","TGTAAACGACATAAGT",3,8.86,9.86,-0.98,0.19,2.17,1,0.02,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TGTAAACGACTATAAA",2,13.67,6.09,-4.74,0.92,2.87,1.11,0.01,">1 nonsynonymous","L38V T140H C150L",3
"lib2","SARS-CoV-2","TGTAAACTTCCACCAT",5,0.98,NA,NA,NA,NA,NA,NA,"stop","I2* S45I",2
"lib2","SARS-CoV-2","TGTAAACTTGTTTATA",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11P Y35W F99S A105E S184I T201L",6
"lib2","SARS-CoV-2","TGTAAAGAAGTAATTT",4,21.73,10.8,-0.03,0.07,2.91,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAAAGAGAAAACAG",3,40.99,6,-4.84,1.51,1.5,1.13,0.01,">1 nonsynonymous","Y39H L162P",2
"lib2","SARS-CoV-2","TGTAAAGAGGCTGACA",2,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L I88K G116V Q144P",4
"lib2","SARS-CoV-2","TGTAAAGATACTTCTC",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75F T85L L122W V153P F167Q",5
"lib2","SARS-CoV-2","TGTAAAGCCGAAGAAC",4,41.03,10.79,-0.05,0.08,2.79,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAAAGGAAAAAACA",5,0.74,NA,NA,NA,NA,NA,NA,"stop","A33N A81F D97* K114L E135T",5
"lib2","SARS-CoV-2","TGTAAAGGATTGTACT",1,29.88,10.84,0,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAAAGGGATCATAC",6,101.22,8.56,-2.27,0.1,2.97,1.06,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","TGTAAAGTAATATCCG",1,9.71,10.69,-0.14,0.11,2.86,1.17,0,"1 nonsynonymous","G9K",1
"lib2","SARS-CoV-2","TGTAAAGTATTATACT",2,29.65,9.59,-1.24,0.06,2.9,1.09,0,">1 nonsynonymous","A42R K87M F156L",3
"lib2","SARS-CoV-2","TGTAAATAACCTGACA",4,14.18,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","V71S A105C V153A V180P",4
"lib2","SARS-CoV-2","TGTAAATACGATCTGG",29,188.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V77G T100V N118L N151F N157R",5
"lib2","SARS-CoV-2","TGTAAATACTCCGTTT",9,305.79,10.66,-0.18,0.03,2.95,1.08,0,">1 nonsynonymous","Y121F S129D",2
"lib2","SARS-CoV-2","TGTAAATATATATAAC",10,4.99,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","TGTAAATATTACCCAA",1,1.47,NA,NA,NA,NA,NA,NA,"stop","W23* S29L C49F P54V",4
"lib2","SARS-CoV-2","TGTAAATCAAAAACAA",9,79.41,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","I28A F47P T85H D97N",4
"lib2","SARS-CoV-2","TGTAAATCATTCTATT",10,60.73,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N4L N64S V103R L122S S129E I142F",6
"lib2","SARS-CoV-2","TGTAAATGATCACGAG",7,1.77,NA,NA,NA,NA,NA,NA,"stop","G9* S147T",2
"lib2","SARS-CoV-2","TGTAAATGGAAATACG",2,2.09,NA,NA,NA,NA,NA,NA,"stop","C6Y K56L R136* T148V",4
"lib2","SARS-CoV-2","TGTAAATTATTGCCCG",4,18.21,9.47,-1.36,0.24,1.74,1.07,0.03,"1 nonsynonymous","V103L",1
"lib2","SARS-CoV-2","TGTAACAAATTTTACG",3,0.23,NA,NA,NA,NA,NA,NA,"stop","V103* K114F",2
"lib2","SARS-CoV-2","TGTAACAACGAATATT",2,50.78,9.95,-0.89,0.12,2.69,1.19,0.01,"1 nonsynonymous","L57H",1
"lib2","SARS-CoV-2","TGTAACAACTTTAAGA",9,356.28,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","S69Q C158L",2
"lib2","SARS-CoV-2","TGTAACACAAAACAAT",8,89.56,7.38,-3.45,0.23,1.5,1.13,0.01,">1 nonsynonymous","G9D Y35V L57A P161V",4
"lib2","SARS-CoV-2","TGTAACACAATTTTGT",4,14.17,6,-4.84,2,3,1.2,0,">1 nonsynonymous","C150E Q176S",2
"lib2","SARS-CoV-2","TGTAACACCCCACATG",10,122.59,10.83,-0.01,0.04,2.92,1.11,0,"1 nonsynonymous","N1T",1
"lib2","SARS-CoV-2","TGTAACAGGATAAGCA",2,15.15,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V20S C31A F99K T140A",4
"lib2","SARS-CoV-2","TGTAACAGTTAGATAA",1,10.2,6,-4.84,2,3,1.03,0.01,">1 nonsynonymous","N64P V180P",2
"lib2","SARS-CoV-2","TGTAACATAATCATAT",4,54.08,10.21,-0.63,0.04,2.91,1.03,0,">1 nonsynonymous","K114S E141R P149L",3
"lib2","SARS-CoV-2","TGTAACCAACGTTTTA",2,34.77,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L5W C61P Y123S V173E R179L",5
"lib2","SARS-CoV-2","TGTAACCAATAGTTCC",8,208.41,10.32,-0.52,0.03,2.91,1.05,0,"1 nonsynonymous","S45C",1
"lib2","SARS-CoV-2","TGTAACCACTTGCCGG",3,16.16,10.3,-0.54,0.12,2.65,1.02,0.01,">1 nonsynonymous","A42H W106Q",2
"lib2","SARS-CoV-2","TGTAACCATGAACTGA",5,27.65,10.78,-0.06,0.07,3,1.06,0,"1 nonsynonymous","R27I",1
"lib2","SARS-CoV-2","TGTAACCGAGAAATGC",18,130.54,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","V32P C61R W106G G146N",4
"lib2","SARS-CoV-2","TGTAACCGTACTTCTA",9,108.88,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5S L131W",2
"lib2","SARS-CoV-2","TGTAACCTCTTAAAGA",2,27.28,8.58,-2.26,0.29,1.5,1.11,0.03,">1 nonsynonymous","V20M N110L Q163K S200L",4
"lib2","SARS-CoV-2","TGTAACCTTGAACACT",1,17.23,10.67,-0.17,0.08,2.98,1,0,">1 nonsynonymous","N64C I80V L122N",3
"lib2","SARS-CoV-2","TGTAACGAAAGAAACA",11,7.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L95I E141F G152H",3
"lib2","SARS-CoV-2","TGTAACGACCAGTTGG",8,4.05,NA,NA,NA,NA,NA,NA,"stop","L5F G9R P82L L122* C158H",5
"lib2","SARS-CoV-2","TGTAACGCACTGTAAA",3,52.07,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","C6Y D68P E76K Y119T",4
"lib2","SARS-CoV-2","TGTAACGGGTCCCCTG",3,22.69,6,-4.84,2,1.5,1.19,0.06,">1 nonsynonymous","V37C Y50C A89P Y121L C158E",5
"lib2","SARS-CoV-2","TGTAACTAGAAACTCA",21,190.96,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","A14F V37Q K132V Y143T T201R",5
"lib2","SARS-CoV-2","TGTAACTCATAGTCAA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","N4* G51A V65P Y93* L162Y K198R",6
"lib2","SARS-CoV-2","TGTAACTCTACACGTA",1,9.88,11.02,0.18,0.14,3,1,0,"1 nonsynonymous","G146S",1
"lib2","SARS-CoV-2","TGTAACTGCGACCTCA",11,215.57,9.64,-1.19,0.05,2.79,1.04,0,">1 nonsynonymous","A67F E154V K198E",3
"lib2","SARS-CoV-2","TGTAACTTAAAAGACT",1,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33D S69M W106S L122A",4
"lib2","SARS-CoV-2","TGTAACTTATCTATCG",4,0.17,NA,NA,NA,NA,NA,NA,"stop","V37* P54L T85Y G146H Y165L",5
"lib2","SARS-CoV-2","TGTAACTTCAACTTAC",2,7.45,10.65,-0.18,0.07,2.74,1.3,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAACTTCTTGGTAT",4,79.35,7.31,-3.53,0.22,1.5,1.15,0.02,">1 nonsynonymous","W23E P149N",2
"lib2","SARS-CoV-2","TGTAACTTTCACAAAC",2,115.29,10.79,-0.05,0.07,2.87,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTAAGAAACCAGGTT",2,28.69,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T63P F70T S139V",3
"lib2","SARS-CoV-2","TGTAAGAAGCCTAGAT",12,27.88,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","V65D Y119I V173E S200R",4
"lib2","SARS-CoV-2","TGTAAGAATCAAAAGA",5,26.63,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S69M G117M L125Y T201N",4
"lib2","SARS-CoV-2","TGTAAGACACCCCCTA",14,250.21,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","R27K V37R I88N Q176A",4
"lib2","SARS-CoV-2","TGTAAGAGATATTAAT",2,25.12,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V52M K94G N120T",3
"lib2","SARS-CoV-2","TGTAAGATACCGCCTG",9,169.41,10.84,0,0.04,2.93,1.08,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","TGTAAGATTACACTAT",7,85.15,10.74,-0.1,0.09,2.77,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTAAGATTTTTGATC",5,61.39,9.29,-1.54,0.13,1.74,1.07,0.01,">1 nonsynonymous","F44P K56F A81G",3
"lib2","SARS-CoV-2","TGTAAGCAATGTAAAA",3,2.48,NA,NA,NA,NA,NA,NA,"stop","V20L T55* N64R",3
"lib2","SARS-CoV-2","TGTAAGCTGTCACAAC",4,19.36,8.48,-2.35,0.29,1.97,1.22,0.03,">1 nonsynonymous","D34I A42D P169R G174L",4
"lib2","SARS-CoV-2","TGTAAGGCAGCGTTTG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123M",1
"lib2","SARS-CoV-2","TGTAAGGCAGTCTGCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R C49Y Y91N",3
"lib2","SARS-CoV-2","TGTAAGGCCATACGCC",3,0.75,NA,NA,NA,NA,NA,NA,"stop","P96R N107*",2
"lib2","SARS-CoV-2","TGTAAGGTAATGAACC",7,89.26,10.05,-0.78,0.09,2.33,1.06,0,"1 nonsynonymous","G51Y",1
"lib2","SARS-CoV-2","TGTAAGTAATAAAACA",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","E10N",1
"lib2","SARS-CoV-2","TGTAAGTAATTCATAT",2,48.03,9.8,-1.04,0.1,2.11,1.12,0,">1 nonsynonymous","L95T N130A",2
"lib2","SARS-CoV-2","TGTAAGTAGCGGATAG",6,31.06,9.46,-1.37,0.13,1.88,1.1,0.01,">1 nonsynonymous","F62L A105F",2
"lib2","SARS-CoV-2","TGTAAGTATAAGTTAA",2,24.5,7.43,-3.41,0.48,1.5,1,0.06,">1 nonsynonymous","G9V R25K K48E P54V L95T F156V G166C",7
"lib2","SARS-CoV-2","TGTAAGTGTAACACCC",3,127.01,8.51,-2.33,0.14,2.15,1.11,0.01,">1 nonsynonymous","N24A F62N D90S F156G",4
"lib2","SARS-CoV-2","TGTAAGTTGTTGTCAT",12,113.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","A22G F62C A81K W106E N109D G116R",6
"lib2","SARS-CoV-2","TGTAATAACAGCCCAA",2,40.25,10.72,-0.11,0.06,2.91,1.08,0,">1 nonsynonymous","V32K N110T",2
"lib2","SARS-CoV-2","TGTAATAAGCCTAGTT",2,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91Q D97M T170Q",3
"lib2","SARS-CoV-2","TGTAATAAGCTTGATA",3,2.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49L L60P K94F V103S Y119R G152H",6
"lib2","SARS-CoV-2","TGTAATAATATAGAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","T46*",1
"lib2","SARS-CoV-2","TGTAATAATGATGATC",2,13.77,9.98,-0.85,0.1,3,1.02,0,">1 nonsynonymous","K56C T100K N151I",3
"lib2","SARS-CoV-2","TGTAATACAATAAAAA",18,6.9,NA,NA,NA,NA,NA,NA,"stop","C6* N64C V77N T85K D90L T100S E141V G146T",8
"lib2","SARS-CoV-2","TGTAATAGAATATACA",2,46.22,9.19,-1.65,0.06,1.96,1.06,0,"1 nonsynonymous","F12S",1
"lib2","SARS-CoV-2","TGTAATAGAATCAACT",19,6.12,NA,NA,NA,NA,NA,NA,"stop","Y35F T46* N64H S69E K94I A105F K199N",7
"lib2","SARS-CoV-2","TGTAATAGTGGCACCA",8,9.77,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","S43I G86H T100F A105G",4
"lib2","SARS-CoV-2","TGTAATATAACGTATT",14,147.64,10.2,-0.63,0.04,2.91,1.05,0,">1 nonsynonymous","R27E C61R K128S I138H",4
"lib2","SARS-CoV-2","TGTAATATACAACGGG",6,28.33,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","E10G S43T K87D G101N R136V G152S",6
"lib2","SARS-CoV-2","TGTAATATAGAGTTTA",6,49.88,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L5R N24W D112L A190L",4
"lib2","SARS-CoV-2","TGTAATATGGTCCTTA",2,34.16,10.65,-0.18,0.05,2.88,1.1,0,"1 nonsynonymous","A42S",1
"lib2","SARS-CoV-2","TGTAATCAACGGGCTA",10,157.25,10.87,0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAATCACCTTATAA",1,3.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21M I80S G152S F156S T201K",5
"lib2","SARS-CoV-2","TGTAATCCATCCCCAC",10,105.58,10.67,-0.17,0.03,2.98,1.03,0,">1 nonsynonymous","S29N S36L A42P",3
"lib2","SARS-CoV-2","TGTAATCCGCCACCGC",2,0.05,NA,NA,NA,NA,NA,NA,"stop","P7* T63V",2
"lib2","SARS-CoV-2","TGTAATCGTGTGCATA",22,70.23,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","C6L T100P",2
"lib2","SARS-CoV-2","TGTAATCTCACGAACT",1,2.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56I I104K",2
"lib2","SARS-CoV-2","TGTAATCTTACTAGAC",2,5.45,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","L38H D98V N130L",3
"lib2","SARS-CoV-2","TGTAATGAACATGCCT",6,186.58,10.64,-0.2,0.03,2.9,1.09,0,"1 nonsynonymous","F44I",1
"lib2","SARS-CoV-2","TGTAATGAACTATTGT",3,0.13,NA,NA,NA,NA,NA,NA,"stop","I28R C61V I80P K87P T100F S113P E141*",7
"lib2","SARS-CoV-2","TGTAATGACGCTTTAA",1,26.3,9.22,-1.62,0.14,1.53,1.05,0.01,">1 nonsynonymous","E135N V173S",2
"lib2","SARS-CoV-2","TGTAATGATGACCCAA",16,177.73,9.84,-1,0.06,2.13,1.03,0,"1 nonsynonymous","I28Q",1
"lib2","SARS-CoV-2","TGTAATGCCCTAATAA",4,110.34,10.05,-0.78,0.06,2.83,1.03,0,">1 nonsynonymous","Q79E T140P",2
"lib2","SARS-CoV-2","TGTAATGCGGGCATAT",6,137.97,10.87,0.03,0.03,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAATGGGACTTAAT",6,26.23,NA,NA,NA,NA,NA,NA,"stop","T15* L95T F99Y F156C",4
"lib2","SARS-CoV-2","TGTAATGGGAGTACAG",1,13.7,9.82,-1.01,0.13,2.45,1.15,0.01,">1 nonsynonymous","Y35T D90S K114M P197S",4
"lib2","SARS-CoV-2","TGTAATGTAAAAACAT",14,193.63,9.11,-1.72,0.13,1.5,1.06,0.01,">1 nonsynonymous","N40F T46M A81V Y91F",4
"lib2","SARS-CoV-2","TGTAATGTAATTGATG",1,9.08,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","C6R T100P",2
"lib2","SARS-CoV-2","TGTAATGTCCATAAAA",3,33.12,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","S45I T85P N107T R124V F156L",5
"lib2","SARS-CoV-2","TGTAATGTCTTATTAA",11,118.76,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I28K G51V D59R A105S",4
"lib2","SARS-CoV-2","TGTAATTAATAGCAGG",3,8.86,9.54,-1.3,0.17,2.31,1.09,0.01,"1 nonsynonymous","K26G",1
"lib2","SARS-CoV-2","TGTAATTACCCATTAT",9,89.87,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C6F Y35T P54F Y121S S184D",5
"lib2","SARS-CoV-2","TGTAATTACCGACAAA",3,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I D98W K114S R127C",4
"lib2","SARS-CoV-2","TGTAATTACCGATCCT",4,21.44,8.28,-2.55,0.15,2.1,1.05,0.01,">1 nonsynonymous","G117S A145S N151I",3
"lib2","SARS-CoV-2","TGTAATTACGGGATTC",2,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20W F44S",2
"lib2","SARS-CoV-2","TGTAATTACTATATTA",3,97.23,8.27,-2.57,0.1,2.31,1.1,0,">1 nonsynonymous","R16D G172S",2
"lib2","SARS-CoV-2","TGTAATTGCAAAACTC",1,67.06,9.34,-1.5,0.08,2.45,1.08,0,"1 nonsynonymous","Q176K",1
"lib2","SARS-CoV-2","TGTACAAAAATGCCAT",1,0.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61G C150S L183R",3
"lib2","SARS-CoV-2","TGTACAAAACAATAAT",7,65.92,10.73,-0.1,0.06,2.87,1.14,0,"1 nonsynonymous","N109L",1
"lib2","SARS-CoV-2","TGTACAAACCTGATTC",6,29.06,6.66,-4.18,0.45,1.5,1.04,0.03,">1 nonsynonymous","F99P Y123L S147V",3
"lib2","SARS-CoV-2","TGTACAAACTTTATGG",4,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Y W23F D34L F99N A105S K114W N120P",7
"lib2","SARS-CoV-2","TGTACAAATAAAAAAT",11,75.66,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A14S K94L N107R",3
"lib2","SARS-CoV-2","TGTACAAATATTCGGT",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K C102I W106L N157K",4
"lib2","SARS-CoV-2","TGTACAACAGTGACTT",6,81.39,10.72,-0.11,0.03,2.94,1.08,0,"1 nonsynonymous","Q163H",1
"lib2","SARS-CoV-2","TGTACAACGTTTAAAG",10,293.37,10.15,-0.69,0.02,2.96,1.05,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","TGTACAACTAGCAAGA",3,21.34,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","I88T N107T G146H",3
"lib2","SARS-CoV-2","TGTACAAGACGAACAG",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28A D97V L131I",3
"lib2","SARS-CoV-2","TGTACAATACGCAGTA",4,1.02,NA,NA,NA,NA,NA,NA,"stop","G9K G101K E141*",3
"lib2","SARS-CoV-2","TGTACAATGTAACAAA",2,13.21,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","K56I P149S F167M",3
"lib2","SARS-CoV-2","TGTACAATGTCGCTTG",1,11.08,10.79,-0.05,0.1,2.96,1.09,0.01,"1 nonsynonymous","A18T",1
"lib2","SARS-CoV-2","TGTACACATGAAGATT",6,18.32,6.73,-4.1,0.64,1.5,1.14,0.08,">1 nonsynonymous","F44H D137L N151A",3
"lib2","SARS-CoV-2","TGTACACCAAGAATGT",1,4.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2V N13C",2
"lib2","SARS-CoV-2","TGTACACGAGTATTAT",15,58.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C49N C158I G174W",3
"lib2","SARS-CoV-2","TGTACAGAGCTATTCT",3,11.38,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","N1D K94L G101S Y175L",4
"lib2","SARS-CoV-2","TGTACAGATAACCAGC",1,15.02,6.52,-4.32,0.45,1.5,1.2,0.02,">1 nonsynonymous","R27M L38W K132H G146S T170L",5
"lib2","SARS-CoV-2","TGTACAGCCCACGACC",2,28.13,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I2R V20T S36H L38V D90I R136F C158V",7
"lib2","SARS-CoV-2","TGTACAGGGACCGTTT",10,40.18,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C102D Y175S",2
"lib2","SARS-CoV-2","TGTACAGTAGTGAGAT",3,0.91,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TGTACATAATTCTGGT",8,67.87,7.86,-2.97,0.18,1.5,1.09,0.01,">1 nonsynonymous","A105T D112E Y121L S129F",4
"lib2","SARS-CoV-2","TGTACATAGATAGAGG",5,34.22,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51T G83R A105G V173L F185Y",5
"lib2","SARS-CoV-2","TGTACATCAACCACAA",1,17.38,10.91,0.08,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTACATCGACTCTAA",4,1.42,NA,NA,NA,NA,NA,NA,"stop","F17T E76* P161E A190E",4
"lib2","SARS-CoV-2","TGTACATGAGCCAGTG",10,102.8,6,-4.84,1.5,1.5,1.18,0.01,">1 nonsynonymous","N1T D97P I142T Y165S",4
"lib2","SARS-CoV-2","TGTACATTAGTGTCCC",2,0,NA,NA,NA,NA,NA,NA,"stop","R16* S41T P82M G117L Y121I",5
"lib2","SARS-CoV-2","TGTACATTTCTATACC",4,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83E T100E",2
"lib2","SARS-CoV-2","TGTACCAAGGTTTTCA",5,8.45,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","N92D L131F F167C K198R T201Y",5
"lib2","SARS-CoV-2","TGTACCAATTTACATA",2,1.19,NA,NA,NA,NA,NA,NA,"stop","L60S P177I S200*",3
"lib2","SARS-CoV-2","TGTACCATGCACGTCC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","TGTACCATGGTCGTCG",14,201.43,10.77,-0.07,0.05,2.94,1.09,0,">1 nonsynonymous","Y39L C61R",2
"lib2","SARS-CoV-2","TGTACCATTCGAGAGC",2,31.91,10.79,-0.04,0.09,2.77,1.23,0,"1 nonsynonymous","S200D",1
"lib2","SARS-CoV-2","TGTACCCAAAGACTCG",9,63.41,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G101V R124G Y143L",3
"lib2","SARS-CoV-2","TGTACCCAACCCGGTG",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100S Y123D T140N",3
"lib2","SARS-CoV-2","TGTACCCCTTACCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T F44D A105Y L122P",4
"lib2","SARS-CoV-2","TGTACCGAGAAACCCC",5,184.75,6,-4.84,2,1.5,1.17,0,"1 nonsynonymous","F167P",1
"lib2","SARS-CoV-2","TGTACCGATATTTGAT",6,21.88,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","W23P I80L R124S P169L L187S",5
"lib2","SARS-CoV-2","TGTACCGATTATCCGA",20,335.79,10,-0.84,0.04,2.55,1.04,0,">1 nonsynonymous","D34Y F62L N130V K198I",4
"lib2","SARS-CoV-2","TGTACCGCACATCACC",4,11.95,8.33,-2.5,0.24,1.5,1.36,0.02,">1 nonsynonymous","T46P N64K",2
"lib2","SARS-CoV-2","TGTACCGTGATCCAGG",21,163.64,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N107K S113W D137L",3
"lib2","SARS-CoV-2","TGTACCTAGTTTGGTA",1,41.83,10.6,-0.23,0.05,2.92,1.09,0,">1 nonsynonymous","R27L C61M",2
"lib2","SARS-CoV-2","TGTACCTGATCATTAC",4,1.8,NA,NA,NA,NA,NA,NA,"stop","A18* R27E Y35* N64P K114A F134A",6
"lib2","SARS-CoV-2","TGTACCTGTAAGCAAT",8,123.82,9.45,-1.38,0.07,2.15,1.05,0,">1 nonsynonymous","F12C C61A",2
"lib2","SARS-CoV-2","TGTACCTGTAATTATA",3,33.26,9.36,-1.48,0.1,2.33,1.07,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TGTACCTTAGATCAAA",4,40.45,9.76,-1.08,0.07,2.93,1.07,0,">1 nonsynonymous","R73Q P149L",2
"lib2","SARS-CoV-2","TGTACGAAACCATTAA",4,47.16,9.97,-0.87,0.09,2.35,1.05,0.01,">1 nonsynonymous","N92G P197V",2
"lib2","SARS-CoV-2","TGTACGAACGAGCATT",7,3.61,NA,NA,NA,NA,NA,NA,"stop","I2T D90* N107K Q176E T201F",5
"lib2","SARS-CoV-2","TGTACGACCCAATAAT",7,128.65,10.11,-0.72,0.09,2.5,1.02,0,">1 nonsynonymous","L5K G51N I104S",3
"lib2","SARS-CoV-2","TGTACGAGGACTATAA",8,45.66,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","G86S K94E G152D",3
"lib2","SARS-CoV-2","TGTACGAGTGAGTACG",6,0.02,NA,NA,NA,NA,NA,NA,"stop","T46Q D68* G83S",3
"lib2","SARS-CoV-2","TGTACGCAAAATACCC",2,89.73,10.84,0,0.03,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTACGCAAATATAGG",4,68.35,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G9I C49R R78I Y93W N118F",5
"lib2","SARS-CoV-2","TGTACGGAACATACAT",4,51.3,8.96,-1.88,0.1,2.07,1.05,0,">1 nonsynonymous","K94N F134W Y143M",3
"lib2","SARS-CoV-2","TGTACGGATCATGCAA",4,0.4,NA,NA,NA,NA,NA,NA,"stop","F44L N58T K128I G172Y Y175* P197H",6
"lib2","SARS-CoV-2","TGTACGGTAGACAACA",2,17.39,9.42,-1.42,0.35,1.5,1.09,0.06,">1 nonsynonymous","Y50T E141S",2
"lib2","SARS-CoV-2","TGTACGTCCCGAACTG",3,96.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40E K56Q V77H L131S",4
"lib2","SARS-CoV-2","TGTACGTTTTCTTGAA",3,18.57,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R73S A81Y Y143Q F167L",4
"lib2","SARS-CoV-2","TGTACTAAAACAAGGG",11,3.92,NA,NA,NA,NA,NA,NA,"stop","N1T I138*",2
"lib2","SARS-CoV-2","TGTACTAACCATGATG",9,45.48,6,-4.84,2,1.5,1.39,0.04,">1 nonsynonymous","C61R G101Y K198W",3
"lib2","SARS-CoV-2","TGTACTACAGGGAGAA",4,36.15,6,-4.84,2,3,1.33,0.01,">1 nonsynonymous","C6P I88M A105S G166F",4
"lib2","SARS-CoV-2","TGTACTAGCTACAGCC",1,19.21,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","E10T V52I K94N N107Y",4
"lib2","SARS-CoV-2","TGTACTCATAAAATTC",2,83.24,10.84,0.01,0.03,2.82,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTACTCCACAGCACT",6,30.22,7.79,-3.05,0.29,1.5,1.1,0.03,">1 nonsynonymous","C6S V103D R124L",3
"lib2","SARS-CoV-2","TGTACTCGACAGATAC",3,17.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y21V I28K V37G K94G K128T I138W",6
"lib2","SARS-CoV-2","TGTACTCTGTGAAAAC",4,7.76,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","L38F K94H F99S V173N V181G",5
"lib2","SARS-CoV-2","TGTACTGAACTAAAAC",7,2.72,NA,NA,NA,NA,NA,NA,"stop","F70* Y93M W106L P133Q",4
"lib2","SARS-CoV-2","TGTACTGAGCATGCCT",3,53.37,9.33,-1.5,0.07,2.88,1.1,0,"1 nonsynonymous","G174V",1
"lib2","SARS-CoV-2","TGTACTGATTTGAACG",3,0,NA,NA,NA,NA,NA,NA,"stop","W23* L57T V77P Y175L",4
"lib2","SARS-CoV-2","TGTACTGCAAATTCGC",4,14.56,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","D68N Q144R",2
"lib2","SARS-CoV-2","TGTACTGTAAATCAAA",3,14.04,9.01,-1.83,0.14,1.67,1.02,0.01,">1 nonsynonymous","G9L G86S",2
"lib2","SARS-CoV-2","TGTACTGTTGGAAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A22Y",1
"lib2","SARS-CoV-2","TGTACTTAATTCATTA",2,27.77,6,-4.84,2,1.5,1.41,0.05,">1 nonsynonymous","D90N N92Y D112W",3
"lib2","SARS-CoV-2","TGTACTTCAATGACAA",1,12.14,10.74,-0.1,0.11,2.98,1.04,0,">1 nonsynonymous","A42N Y50C Q84H A105N",4
"lib2","SARS-CoV-2","TGTACTTCACTCCTAT",1,9.67,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","G9E A33H C61W R179M",4
"lib2","SARS-CoV-2","TGTACTTCTAATAACA",2,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N V20K R27V S36Y I104W F134L",6
"lib2","SARS-CoV-2","TGTACTTTAAGCCAGA",3,11.34,10.93,0.1,0.1,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTACTTTACTACCGG",5,68.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8G K94Y C150Q",3
"lib2","SARS-CoV-2","TGTACTTTCAACTGTA",4,2.65,NA,NA,NA,NA,NA,NA,"stop","A18R F44* K87M V103Q",4
"lib2","SARS-CoV-2","TGTACTTTCCCTTTCG",17,324.51,10.84,0.01,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTACTTTGGAAGCAC",1,7.39,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","D34P Y91T G146Y N157D",4
"lib2","SARS-CoV-2","TGTAGAAAACTTAACA",1,43.87,10.19,-0.65,0.07,2.55,1.04,0,">1 nonsynonymous","D90I S129D",2
"lib2","SARS-CoV-2","TGTAGAAATTAAAGAG",5,26.07,6.74,-4.1,0.54,1.5,1.17,0.05,">1 nonsynonymous","T3M Y50R G174Y",3
"lib2","SARS-CoV-2","TGTAGAACAAGAACCA",4,51.08,9.73,-1.1,0.08,1.97,1.07,0,">1 nonsynonymous","Y35R I104L Q144M",3
"lib2","SARS-CoV-2","TGTAGATGAAACACGC",8,91.99,9.83,-1.01,0.09,2.18,1.07,0,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","TGTAGATTATAAATGA",5,141.38,10.84,0,0.03,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTAGCAGAGTGGTTA",3,9,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V37L C49S V103S G174L",4
"lib2","SARS-CoV-2","TGTAGCGCTAATAAAC",5,37.77,8.6,-2.24,0.09,2.57,1.1,0,">1 nonsynonymous","Q168D Y178L",2
"lib2","SARS-CoV-2","TGTAGGATTAAAAAAA",5,19.72,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A14S W23S N58S G166Y",4
"lib2","SARS-CoV-2","TGTAGTAGATTTCTCA",7,45.17,10.84,0.01,0.04,3,1.02,0,"1 nonsynonymous","I104L",1
"lib2","SARS-CoV-2","TGTAGTAGCCACAAAG",1,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88V D98N V115M",3
"lib2","SARS-CoV-2","TGTAGTGATCAGACCG",1,32.28,9.07,-1.77,0.11,1.93,1.07,0.01,">1 nonsynonymous","C6Y Y91I",2
"lib2","SARS-CoV-2","TGTATAAACTGATGTG",3,55.64,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L57R N157F",2
"lib2","SARS-CoV-2","TGTATAAATGGATATT",8,77.16,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G9A S41E Y50G S113T P191T",5
"lib2","SARS-CoV-2","TGTATAAATTTAAAAC",8,196.29,10.58,-0.26,0.03,2.84,1.09,0,"1 nonsynonymous","A18R",1
"lib2","SARS-CoV-2","TGTATAAGAAAGTACT",3,32.91,8.6,-2.23,0.08,2.76,1.06,0,">1 nonsynonymous","I2C P54M Y143S K198N",4
"lib2","SARS-CoV-2","TGTATAAGATGAAATA",5,132.51,10.72,-0.11,0.04,2.89,1.13,0,"1 nonsynonymous","D59R",1
"lib2","SARS-CoV-2","TGTATAATAAGCCATC",1,8.17,8.4,-2.44,0.12,3,1.03,0.01,">1 nonsynonymous","L5W S45A K114F E154Y",4
"lib2","SARS-CoV-2","TGTATACAAAAGACAT",2,0,NA,NA,NA,NA,NA,NA,"stop","F44* T63L R136L",3
"lib2","SARS-CoV-2","TGTATACAAACCTAAA",3,21.9,9.76,-1.07,0.14,2.54,1.1,0.01,">1 nonsynonymous","K48Y S139K",2
"lib2","SARS-CoV-2","TGTATACAACTGCAGA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5G S19* D90F K128R",4
"lib2","SARS-CoV-2","TGTATACCTCAGAACG",8,56.35,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","R124H Q144L P169F",3
"lib2","SARS-CoV-2","TGTATACCTTCCTGAG",20,159.19,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V20R V37Q I72Y S129W R179A",5
"lib2","SARS-CoV-2","TGTATACGTCGAATTT",9,67.87,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","L95N D112T G166T",3
"lib2","SARS-CoV-2","TGTATACTCTCTTTAT",5,56.96,10.83,0,0.07,2.88,1.11,0,">1 nonsynonymous","V115L S184N",2
"lib2","SARS-CoV-2","TGTATAGAGAGAAAAG",9,76.53,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D68K N120L S139T Q144P",4
"lib2","SARS-CoV-2","TGTATAGATGTAGAGG",6,21.27,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","C6N P96S K128F T148S T170R",5
"lib2","SARS-CoV-2","TGTATAGCAACTCATC",6,100.25,10.79,-0.05,0.05,2.9,1.1,0,"1 nonsynonymous","N40D",1
"lib2","SARS-CoV-2","TGTATAGCACCGATGA",6,117.59,10.34,-0.49,0.02,2.92,1.03,0,">1 nonsynonymous","A14N N120L",2
"lib2","SARS-CoV-2","TGTATAGTGAGGATCA",8,93.08,8.27,-2.57,0.17,1.84,1.07,0.01,">1 nonsynonymous","E10T D112E Y123R",3
"lib2","SARS-CoV-2","TGTATAGTGCTATCCA",3,29.82,6,-4.84,0.63,1.5,1.16,0.01,">1 nonsynonymous","D68E T100H E135Y",3
"lib2","SARS-CoV-2","TGTATAGTTCAAATTC",1,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12I S43G G86T W106P N120L E141D",6
"lib2","SARS-CoV-2","TGTATATAATATTTCT",3,1.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42N P82E I88R V103L G172T",5
"lib2","SARS-CoV-2","TGTATATATACAGGAA",10,157.44,10.28,-0.56,0.03,2.82,1.11,0,">1 nonsynonymous","P7I N120Q",2
"lib2","SARS-CoV-2","TGTATATTAAACAGAT",13,77.81,6.03,-4.8,1.27,1.5,1.29,0.04,">1 nonsynonymous","K128A V180S",2
"lib2","SARS-CoV-2","TGTATATTCCCATAGA",11,149.93,10.17,-0.67,0.03,2.9,1.04,0,">1 nonsynonymous","F44D G83H G196T",3
"lib2","SARS-CoV-2","TGTATATTGCCTCTAT",6,87.93,10.49,-0.34,0.06,2.84,1.06,0,"1 nonsynonymous","E135C",1
"lib2","SARS-CoV-2","TGTATATTGTTTCTTG",1,13.65,10.17,-0.67,0.08,3,1.01,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","TGTATATTTATTAGAT",11,4.58,NA,NA,NA,NA,NA,NA,"stop","P96S V103* L183I",3
"lib2","SARS-CoV-2","TGTATCAAATATATAG",4,67.69,10.74,-0.09,0.08,2.89,1.12,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","TGTATCAACTTTAACC",2,41.52,8.94,-1.89,0.18,1.55,1.11,0.01,">1 nonsynonymous","Y50L A192K",2
"lib2","SARS-CoV-2","TGTATCAAGAAAAAAC",13,164.27,10.79,-0.05,0.03,2.97,1.05,0,"1 nonsynonymous","R78S",1
"lib2","SARS-CoV-2","TGTATCAGCTCGATCC",8,0,NA,NA,NA,NA,NA,NA,"stop","A14P V37N Y50D T85* L122*",5
"lib2","SARS-CoV-2","TGTATCATATAGACAA",4,15.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94D P161N",2
"lib2","SARS-CoV-2","TGTATCCCAGACACCA",4,26.03,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A22V G86C Q144Y",3
"lib2","SARS-CoV-2","TGTATCGTAGAATACA",2,31.31,6.01,-4.82,0.58,1.5,1.09,0.01,">1 nonsynonymous","K114D E141T C150S",3
"lib2","SARS-CoV-2","TGTATCGTGCTTGACG",17,123.93,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T46N V77G G116L",3
"lib2","SARS-CoV-2","TGTATCTCAACCGCTG",4,90.36,10.42,-0.41,0.04,2.91,1.06,0,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","TGTATCTCGCTAAATA",7,8.21,6.73,-4.1,0.56,1.88,1.13,0.06,">1 nonsynonymous","N1F A33V G83S A105S L122R R127P",6
"lib2","SARS-CoV-2","TGTATCTGCCAATAGC",10,0.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C102M S164C",2
"lib2","SARS-CoV-2","TGTATCTGCGACAAGC",1,0.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V A42T Y91L P96T V181M",5
"lib2","SARS-CoV-2","TGTATCTTCGCCGTTG",1,32.03,10.34,-0.49,0.05,2.87,1.05,0,">1 nonsynonymous","S36L S139H",2
"lib2","SARS-CoV-2","TGTATGAATAACCATT",6,79.91,9.5,-1.34,0.1,1.71,1.05,0,">1 nonsynonymous","A105L K199M",2
"lib2","SARS-CoV-2","TGTATGAGATTATGGC",8,45.13,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N4E Q84C L95S",3
"lib2","SARS-CoV-2","TGTATGATACCGATGT",2,13.67,6.77,-4.07,0.26,1.5,1.08,0.02,">1 nonsynonymous","S45F S53V E141A N157S Q163R",5
"lib2","SARS-CoV-2","TGTATGATTGCACAAG",1,28.5,10.8,-0.04,0.08,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTATGCAACGGGATT",5,14.66,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","T15Y R25G N64C I138G",4
"lib2","SARS-CoV-2","TGTATGCCCCCAGTTC",6,53.8,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14Y K26S Q79W T85M Y91Q",5
"lib2","SARS-CoV-2","TGTATGCGAATAACCG",3,96.72,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","T15C W106F S113W G174N",4
"lib2","SARS-CoV-2","TGTATGGACGATTGAG",18,255.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S36W Q176F",2
"lib2","SARS-CoV-2","TGTATGGACTTACTAA",13,0.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4R G86H",2
"lib2","SARS-CoV-2","TGTATGGAGACCAATA",7,218.65,7.62,-3.21,0.19,1.5,1.1,0.01,">1 nonsynonymous","I2T T100R G155N Y178E",4
"lib2","SARS-CoV-2","TGTATGTAATCCTCAT",2,66.4,10.89,0.05,0.06,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTATGTAATCGTTCC",5,56.03,9.57,-1.27,0.12,1.71,1.13,0.01,">1 nonsynonymous","I88T K128A",2
"lib2","SARS-CoV-2","TGTATGTACCAGAACG",4,12.47,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","Y93A F99N W106S G146W V153C",5
"lib2","SARS-CoV-2","TGTATGTGACACAAAA",1,16.59,10.67,-0.17,0.06,3,1,0,">1 nonsynonymous","G9K T201Q",2
"lib2","SARS-CoV-2","TGTATGTGTGACATAG",5,22.12,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","L95R N120S G155L",3
"lib2","SARS-CoV-2","TGTATTAAAGGGTCTA",2,18.84,10.78,-0.05,0.06,3,1.01,0,"1 nonsynonymous","T63E",1
"lib2","SARS-CoV-2","TGTATTAATGAACTCT",9,136.48,9.93,-0.91,0.05,2.63,1.05,0,">1 nonsynonymous","F44S K128R E141N V173A L187V S200L",6
"lib2","SARS-CoV-2","TGTATTACAATATAAT",3,25.26,6.07,-4.77,0.44,1.5,1.13,0.01,">1 nonsynonymous","V11S W23S F47T I88L P149S",5
"lib2","SARS-CoV-2","TGTATTACCAATAGAG",6,60.3,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9V C49A Y119A Y143C",4
"lib2","SARS-CoV-2","TGTATTACCTCCGACA",4,60.88,9.65,-1.19,0.07,2.37,1.02,0,">1 nonsynonymous","N13Y T55G V173G",3
"lib2","SARS-CoV-2","TGTATTACTAATCGCA",4,63.52,10.65,-0.19,0.05,2.92,1.07,0,">1 nonsynonymous","S41Y T148D S200T",3
"lib2","SARS-CoV-2","TGTATTATATACTAAC",1,0.31,NA,NA,NA,NA,NA,NA,"stop","L5* L60N",2
"lib2","SARS-CoV-2","TGTATTCACCTAATAA",9,109.17,6.48,-4.35,0.45,1.5,1.18,0.02,">1 nonsynonymous","D137P V153L",2
"lib2","SARS-CoV-2","TGTATTCATATCTAAC",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5T S41F P96D I142P",4
"lib2","SARS-CoV-2","TGTATTCCAAAGCAGA",1,3.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F P54S V103M R127V G174V",5
"lib2","SARS-CoV-2","TGTATTCCACTGGCCA",1,12.28,9.84,-1,0.13,2.71,1.09,0.01,">1 nonsynonymous","N13S E135G",2
"lib2","SARS-CoV-2","TGTATTCCGACCGACG",9,75.03,9.99,-0.84,0.06,2.94,1.06,0,">1 nonsynonymous","G9D Y119K",2
"lib2","SARS-CoV-2","TGTATTGAAATTACCG",6,73.23,10.72,-0.11,0.03,2.97,1.03,0,"1 nonsynonymous","T85M",1
"lib2","SARS-CoV-2","TGTATTGACTCCAGTT",1,40.48,10.63,-0.2,0.04,2.97,1.01,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TGTATTGCAAGACACA",7,59.05,10.34,-0.5,0.05,2.83,1.05,0,">1 nonsynonymous","F8I Y39P T55Y",3
"lib2","SARS-CoV-2","TGTATTGCTTACCAGA",9,261.09,10.29,-0.55,0.03,2.88,1.04,0,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","TGTATTGGAAAATCTA",9,135.41,10,-0.84,0.05,2.15,1,0,">1 nonsynonymous","K26G E154R",2
"lib2","SARS-CoV-2","TGTATTGTCTAAAAGA",9,1.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81V R127P",2
"lib2","SARS-CoV-2","TGTATTTACATCTTGG",8,150.98,10.29,-0.54,0.04,2.9,1.03,0,">1 nonsynonymous","P96A Q144E",2
"lib2","SARS-CoV-2","TGTATTTATCACAAAG",4,56.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A33R K94T",2
"lib2","SARS-CoV-2","TGTCAAAAAAGACTAA",6,192.59,10.8,-0.03,0.06,2.93,1.07,0,"1 nonsynonymous","N64Y",1
"lib2","SARS-CoV-2","TGTCAAAAAGCGCACA",3,30.62,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R27N S69L T100F A105F Q144L",5
"lib2","SARS-CoV-2","TGTCAAAACAAGCGAA",6,0.41,NA,NA,NA,NA,NA,NA,"stop","E10D F12W I72* L95N F167R T201*",6
"lib2","SARS-CoV-2","TGTCAAACACGCATAA",2,37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C31L C61E Y143K",3
"lib2","SARS-CoV-2","TGTCAAACATATGTAT",5,95.01,8.57,-2.27,0.09,2.95,1.1,0,"1 nonsynonymous","Q168K",1
"lib2","SARS-CoV-2","TGTCAAACATCGAAGA",1,6.33,10.63,-0.21,0.14,2.84,1.2,0,">1 nonsynonymous","T15D T55P",2
"lib2","SARS-CoV-2","TGTCAAACGAAGAAAC",1,29.78,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C61S Y159M Q176S",3
"lib2","SARS-CoV-2","TGTCAAAGATACAACT",8,121.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26I V37K V103L",3
"lib2","SARS-CoV-2","TGTCAAAGCTACTAAC",2,11.85,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F99P D137R",2
"lib2","SARS-CoV-2","TGTCAAAGTGGATATA",2,8.84,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G83I Y165A",2
"lib2","SARS-CoV-2","TGTCAAAGTTCAAAAT",2,4.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12G G83C Y91R F126A N151M",5
"lib2","SARS-CoV-2","TGTCAAATATACGCAG",6,161.97,10.84,0,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCAAATCGCTTAAA",9,237.4,10.89,0.06,0.05,2.98,1.04,0,">1 nonsynonymous","V37W P191T",2
"lib2","SARS-CoV-2","TGTCAAATGGATACAA",5,80.05,6,-4.84,2,1.5,1.15,0.01,"1 nonsynonymous","V103W",1
"lib2","SARS-CoV-2","TGTCAAATTGAAAGAC",2,15.53,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","K26P",1
"lib2","SARS-CoV-2","TGTCAAATTTGTACCA",7,41.93,10.57,-0.26,0.05,2.88,1.15,0,"1 nonsynonymous","K132N",1
"lib2","SARS-CoV-2","TGTCAACATACTCTTA",4,85.07,10.72,-0.11,0.04,2.94,1.08,0,">1 nonsynonymous","N4T I104Y",2
"lib2","SARS-CoV-2","TGTCAACCGCTTAGCG",16,277.48,9.97,-0.86,0.03,2.85,1.03,0,"1 nonsynonymous","N107Q",1
"lib2","SARS-CoV-2","TGTCAACTTTGGGGAA",7,49.61,9.09,-1.75,0.12,2.3,1.1,0,">1 nonsynonymous","N4P N118I",2
"lib2","SARS-CoV-2","TGTCAAGAAACGCTAT",2,56.72,7.59,-3.25,0.15,2.15,1.07,0.01,">1 nonsynonymous","T140M P149S Y175V",3
"lib2","SARS-CoV-2","TGTCAAGACAATAAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62S A89L W106A",3
"lib2","SARS-CoV-2","TGTCAAGGATTAAACG",8,213.98,10.55,-0.29,0.02,2.93,1.05,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","TGTCAAGTGAAAGTGT",3,51.34,7.24,-3.59,0.18,2.27,1.13,0.01,">1 nonsynonymous","A42N C158A",2
"lib2","SARS-CoV-2","TGTCAATAAAGAGAAT",18,181.08,9.51,-1.33,0.03,1.83,1.09,0,">1 nonsynonymous","Y35V F47Y S147N G155S V182I",5
"lib2","SARS-CoV-2","TGTCAATATAAATACA",1,0,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib2","SARS-CoV-2","TGTCAATGCCCATTCA",10,117.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F99C F134C",2
"lib2","SARS-CoV-2","TGTCAATTGAACTTCT",3,9.07,NA,NA,NA,NA,NA,NA,"stop","C6T T15* P82L A105S",4
"lib2","SARS-CoV-2","TGTCACAATAAGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","W23A S36P Y123V G146C P197*",5
"lib2","SARS-CoV-2","TGTCACACCCTGACAC",2,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8M P149I Q163R",3
"lib2","SARS-CoV-2","TGTCACATAAACTCCA",4,10.26,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F12S P96R",2
"lib2","SARS-CoV-2","TGTCACATACGGTTAG",1,8.49,6.69,-4.15,0.59,1.5,1.05,0.07,">1 nonsynonymous","D68V K87N F99Y Q144L",4
"lib2","SARS-CoV-2","TGTCACATCGCGTTTA",9,96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","S53M T85R F167R",3
"lib2","SARS-CoV-2","TGTCACATCTAACAGA",5,90.75,9.98,-0.85,0.06,2.63,1.04,0,">1 nonsynonymous","N120L Y178M T193A",3
"lib2","SARS-CoV-2","TGTCACCCCCGGCGAC",3,53.86,10.86,0.02,0.06,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCACCGGAGCAGAT",8,48.93,6,-4.84,2,3,1.19,0,">1 nonsynonymous","D34R P82H",2
"lib2","SARS-CoV-2","TGTCACCTGCTGTGGA",1,11.91,9.48,-1.35,0.39,1.82,1.2,0.05,">1 nonsynonymous","C49I D97H",2
"lib2","SARS-CoV-2","TGTCACGCCAGTCAAA",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V Y119T I142P",3
"lib2","SARS-CoV-2","TGTCACGGAGAATTAA",1,96.71,9.25,-1.58,0.05,2.93,1.06,0,"1 nonsynonymous","G117L",1
"lib2","SARS-CoV-2","TGTCACTATGATTCGT",6,141.33,10.73,-0.1,0.02,2.92,1.08,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","TGTCACTCTAAAATGA",2,53.63,9.9,-0.94,0.11,2.55,1.04,0,">1 nonsynonymous","V52G K114T",2
"lib2","SARS-CoV-2","TGTCACTGTTCAACTA",2,51.65,10.6,-0.24,0.04,2.95,1.02,0,">1 nonsynonymous","C61D E154N",2
"lib2","SARS-CoV-2","TGTCAGAATATGGAAT",7,31.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22K V37Y A67S N107S V115Y E141N",6
"lib2","SARS-CoV-2","TGTCAGACTGATGCTG",9,85.94,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","E10L F99P",2
"lib2","SARS-CoV-2","TGTCAGACTGTAAATC",3,5.25,9.49,-1.34,0.41,1.5,1,0.05,">1 nonsynonymous","D34Y Q79H",2
"lib2","SARS-CoV-2","TGTCAGCAATGAGAAC",5,10.01,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N1S A22T K48G A89L Y121G P161S",6
"lib2","SARS-CoV-2","TGTCAGCGTTGTACTA",2,35.03,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3L R25G N40G",3
"lib2","SARS-CoV-2","TGTCAGCTAACAACTG",2,23.35,6,-4.84,2,1.69,1.13,0.02,">1 nonsynonymous","A42S Q84R R136T Y165S",4
"lib2","SARS-CoV-2","TGTCAGGGAATCTACA",9,79.99,6,-4.84,1.68,1.5,1.19,0.01,">1 nonsynonymous","W106A Y165S T170Y",3
"lib2","SARS-CoV-2","TGTCAGTACCGGCGGG",2,0.4,NA,NA,NA,NA,NA,NA,"stop","T55H N64Q D98H V173*",4
"lib2","SARS-CoV-2","TGTCAGTACTAAGAAG",6,38.13,10.35,-0.49,0.06,2.99,1.02,0,"1 nonsynonymous","Y66S",1
"lib2","SARS-CoV-2","TGTCAGTATACAGGCA",28,320.59,9.87,-0.97,0.06,2.34,1.05,0,"1 nonsynonymous","V20S",1
"lib2","SARS-CoV-2","TGTCAGTATTAAAGGC",14,53.86,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","C61I C102L W106L",3
"lib2","SARS-CoV-2","TGTCAGTCGGATTGTT",2,7.16,6,-4.84,0.84,1.5,1.02,0,">1 nonsynonymous","A89K V103S E135D T148N",4
"lib2","SARS-CoV-2","TGTCAGTCTTAAAGAT",5,25.77,6,-4.84,1.07,1.5,1.11,0.01,">1 nonsynonymous","N40V L95W T100L",3
"lib2","SARS-CoV-2","TGTCATAAACATCTTG",1,19.15,10.81,-0.03,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCATAAACCCTGAT",4,50.4,10.53,-0.3,0.07,2.9,1.1,0,">1 nonsynonymous","D59F G152N A190D K198S",4
"lib2","SARS-CoV-2","TGTCATAAATCGGTGC",6,71.14,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","N1R S113W G155Y Y175L",4
"lib2","SARS-CoV-2","TGTCATAACACAAATG",10,177.21,10.7,-0.14,0.03,2.96,1.06,0,">1 nonsynonymous","S36L K128T",2
"lib2","SARS-CoV-2","TGTCATAACGCCCGAA",12,207.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21K Y35V D137N",3
"lib2","SARS-CoV-2","TGTCATAAGTCACTTC",1,24.83,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y21W S43L V52L C61P G86N Q163M",6
"lib2","SARS-CoV-2","TGTCATAATAAGACCT",2,0.09,NA,NA,NA,NA,NA,NA,"stop","A22* A33N D68G N92M I104M N109D Y143C C158L T201L",9
"lib2","SARS-CoV-2","TGTCATACACAATGTT",7,150.36,10.73,-0.11,0.03,2.96,1.04,0,"1 nonsynonymous","S129M",1
"lib2","SARS-CoV-2","TGTCATACGAATCCCA",2,32.82,10.84,0,0.07,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTCATATCTCTGTCA",6,20.4,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68R N107G G117V Q144E N171M",5
"lib2","SARS-CoV-2","TGTCATATTAATGCAA",2,19.42,6,-4.84,1.77,1.5,1.03,0,">1 nonsynonymous","R27G D59L P82L",3
"lib2","SARS-CoV-2","TGTCATCAAATGACAT",3,19.17,6,-4.84,2,1.5,1.08,0.03,">1 nonsynonymous","N92Y S113G P149H",3
"lib2","SARS-CoV-2","TGTCATCTTGGTGGAA",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L L60F G86F S139R P197T",5
"lib2","SARS-CoV-2","TGTCATGAAATATGAC",1,3.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R V37D A81Q P161W Q168H",5
"lib2","SARS-CoV-2","TGTCATGACAGCTCTG",11,176.31,9.51,-1.33,0.04,2.83,1.07,0,">1 nonsynonymous","G74K T148S",2
"lib2","SARS-CoV-2","TGTCATGACCGATGCA",2,23.16,10.55,-0.28,0.1,2.76,1.22,0.01,"1 nonsynonymous","N120I",1
"lib2","SARS-CoV-2","TGTCATGACGAATGCC",2,15.08,8.83,-2,0.13,2,1,0.01,">1 nonsynonymous","V11G G155S",2
"lib2","SARS-CoV-2","TGTCATGCAAGGAGAA",2,27.04,10.83,-0.01,0.07,2.99,1.04,0,">1 nonsynonymous","V52I D98N S129N",3
"lib2","SARS-CoV-2","TGTCATGCGCATAAGT",3,23.4,10.1,-0.74,0.09,2.85,1.13,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","TGTCATGGATGAGGCA",9,5.26,NA,NA,NA,NA,NA,NA,"stop","N13* S41F",2
"lib2","SARS-CoV-2","TGTCATGGCAAATCAC",1,53.56,9.33,-1.51,0.06,2.87,1.13,0,"1 nonsynonymous","Q168I",1
"lib2","SARS-CoV-2","TGTCATTAGCTGAAAA",3,10.8,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S19R L60K Y91H G101V S113M",5
"lib2","SARS-CoV-2","TGTCATTCAGGACGAT",11,1298.48,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","P7M N64L D112K P177M",4
"lib2","SARS-CoV-2","TGTCATTTACCGAATA",3,7.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T100H I104S Y121D F185D",4
"lib2","SARS-CoV-2","TGTCATTTAGAAATCA",5,116.54,6,-4.84,1.09,1.5,1.14,0.01,">1 nonsynonymous","Y165I Q176M",2
"lib2","SARS-CoV-2","TGTCCAAAATCAATTA",3,66.42,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","R73V Y178E",2
"lib2","SARS-CoV-2","TGTCCAACCTAAAAAA",16,58.48,8.64,-2.2,0.2,1.58,1.14,0.02,">1 nonsynonymous","G9A D34K D59P N151I",4
"lib2","SARS-CoV-2","TGTCCAACTAATTTAA",7,182.99,10.83,-0.01,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCCAAGCTGCTGAT",5,62.49,10.74,-0.1,0.06,2.86,1.13,0,">1 nonsynonymous","R27I F44G Q168Y",3
"lib2","SARS-CoV-2","TGTCCAATAACAGAAG",10,115.67,8.2,-2.63,0.14,1.5,1.15,0.01,">1 nonsynonymous","V77E P169R Y178L",3
"lib2","SARS-CoV-2","TGTCCAATTATGCTAC",7,38.02,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N13M N64I A89E V115L",4
"lib2","SARS-CoV-2","TGTCCACAAATGTCAT",1,0.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49H F99E A105L S129F R136H",5
"lib2","SARS-CoV-2","TGTCCACAACCGAATT",6,2.36,NA,NA,NA,NA,NA,NA,"stop","F17*",1
"lib2","SARS-CoV-2","TGTCCACATGCATTAA",6,0.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y119H N130V D137R",3
"lib2","SARS-CoV-2","TGTCCAGACGCAATAA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","E10L C61* A81W L95Y L162Y",5
"lib2","SARS-CoV-2","TGTCCAGCAATCTGTC",6,164.77,10.86,0.03,0.04,2.95,1.07,0,"1 nonsynonymous","E154T",1
"lib2","SARS-CoV-2","TGTCCAGCGCGCCCCA",1,50.71,10.75,-0.08,0.06,3,1.02,0,">1 nonsynonymous","D90N T140M",2
"lib2","SARS-CoV-2","TGTCCAGTCAGAAAAA",5,9.97,8.94,-1.89,0.2,2.16,1.25,0.02,"1 nonsynonymous","P96L",1
"lib2","SARS-CoV-2","TGTCCATTACTCGTAC",1,9.36,10.81,-0.02,0.04,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTCCCAAGCGAACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A81T Y91K",2
"lib2","SARS-CoV-2","TGTCCCACCATCGATA",7,53.3,9.32,-1.52,0.1,2.61,1.13,0,">1 nonsynonymous","G146Q G152D Q163T",3
"lib2","SARS-CoV-2","TGTCCCAGAACTGACT",4,85.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I88P D97S W106F L122T T148S P161M",6
"lib2","SARS-CoV-2","TGTCCCAGGAGGTGAA",11,1.1,NA,NA,NA,NA,NA,NA,"stop","P7A K56Q V71* V103C",4
"lib2","SARS-CoV-2","TGTCCCCAATAACCGT",1,19.71,8.74,-2.09,0.14,2.15,1.08,0.01,">1 nonsynonymous","D34L T85V G174K",3
"lib2","SARS-CoV-2","TGTCCCCACAATGCAA",1,5.96,8.72,-2.11,0.15,1.9,1.1,0.01,">1 nonsynonymous","N40Y L122Y Y165I",3
"lib2","SARS-CoV-2","TGTCCCCACGAAAAAA",14,138.45,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","D59K Y159T",2
"lib2","SARS-CoV-2","TGTCCCGTCAAAACTG",1,39.13,10.61,-0.23,0.06,3,1.03,0,">1 nonsynonymous","C61R Q84R",2
"lib2","SARS-CoV-2","TGTCCCGTCATAAATT",4,36.34,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A89F C150Y G174W",3
"lib2","SARS-CoV-2","TGTCCCGTTCATCCAA",1,56.12,9.13,-1.71,0.14,1.9,1.17,0.01,">1 nonsynonymous","A33L N120Y P149I V173S T201S",5
"lib2","SARS-CoV-2","TGTCCCTCAATAAGCC",8,111.09,10.78,-0.06,0.06,2.89,1.07,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TGTCCGAACCGAGAAG",5,129.03,10.81,-0.03,0.04,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCCGACAATTGTCA",5,16.79,10.12,-0.71,0.11,2.56,1.17,0.01,">1 nonsynonymous","A14L K199T",2
"lib2","SARS-CoV-2","TGTCCGATAGAAACAT",4,0.64,NA,NA,NA,NA,NA,NA,"stop","A14N R27A Y35* N110* G116P C158S G166K",7
"lib2","SARS-CoV-2","TGTCCGATTTACTTTG",10,62.68,10.68,-0.16,0.08,2.87,1.07,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","TGTCCGCGGAGTTAGA",8,153.86,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L111G L131P N157L Y175I",4
"lib2","SARS-CoV-2","TGTCCGCTGTGCCTGA",6,92.93,10.9,0.06,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCCGTTAAACACAC",12,319.72,10.83,0,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCCTACCTACACAA",3,12.01,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A22Q V37S Q84G Y119S F126V Q144L E186L",7
"lib2","SARS-CoV-2","TGTCCTAGATACGATG",13,147.92,10.8,-0.04,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCCTATTAAACATA",4,25.97,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F17L C49S K56R K87R Y159I",5
"lib2","SARS-CoV-2","TGTCCTCGCCCCACCC",17,112.87,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","N30R I72F",2
"lib2","SARS-CoV-2","TGTCCTCTTAAATATG",4,15.85,7.16,-3.68,0.56,1.5,1.19,0.07,">1 nonsynonymous","Y35L V103R",2
"lib2","SARS-CoV-2","TGTCCTGAACACTGAT",1,5.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90S Q176L E186F",3
"lib2","SARS-CoV-2","TGTCCTTAAATTAGTA",8,95.08,9.15,-1.69,0.08,1.9,1.07,0,">1 nonsynonymous","C6T W106L F160N",3
"lib2","SARS-CoV-2","TGTCCTTGAAAACCTA",3,4.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51F Q79K A89S Y178C",4
"lib2","SARS-CoV-2","TGTCCTTGGGTACATG",4,44.02,10.15,-0.68,0.06,2.9,1.04,0,">1 nonsynonymous","R78H E141W S147K",3
"lib2","SARS-CoV-2","TGTCGAAAAAGAACTT",3,93.75,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D34A N110E V180S",3
"lib2","SARS-CoV-2","TGTCGAAAAATTGACT",3,0,NA,NA,NA,NA,NA,NA,"stop","R25T F47L P96F Y119* C150R A192C",6
"lib2","SARS-CoV-2","TGTCGAAATACATAGA",10,119.44,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N58F D98L N157F V173K P191S",5
"lib2","SARS-CoV-2","TGTCGAACTTAATCGT",2,20.94,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","S45T D90I C150T",3
"lib2","SARS-CoV-2","TGTCGAATAAACAATT",3,22.03,8.92,-1.92,0.19,1.76,1.07,0.02,"1 nonsynonymous","V180F",1
"lib2","SARS-CoV-2","TGTCGAATAGGAACGG",2,55.12,10.83,0,0.03,2.91,1.09,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","TGTCGAATTATTACAT",4,24.21,11.03,0.19,0.09,2.95,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCGACACGAAATCA",3,85.98,10.66,-0.18,0.04,2.91,1.1,0,"1 nonsynonymous","S29V",1
"lib2","SARS-CoV-2","TGTCGACATCTTAAAA",1,10.03,9.82,-1.02,0.12,2.74,1.09,0.01,"1 nonsynonymous","Y165M",1
"lib2","SARS-CoV-2","TGTCGACATTGAGAAT",6,16.92,6,-4.84,2,3,1.13,0,">1 nonsynonymous","L131P E141T",2
"lib2","SARS-CoV-2","TGTCGACCGTTTGAAA",2,33.74,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S29M G86V",2
"lib2","SARS-CoV-2","TGTCGACTAATACCGA",4,166.97,10.74,-0.1,0.04,2.95,1.07,0,"1 nonsynonymous","G9W",1
"lib2","SARS-CoV-2","TGTCGAGACTGACAAC",2,34.97,9.09,-1.75,0.06,2.71,1.06,0,"1 nonsynonymous","P161T",1
"lib2","SARS-CoV-2","TGTCGAGATAGATCTA",5,9.5,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","A89H I104D",2
"lib2","SARS-CoV-2","TGTCGAGCAATCAAAA",3,37.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I88N D97V G166I",3
"lib2","SARS-CoV-2","TGTCGAGGAGCCTCAC",1,21.79,8.79,-2.04,0.23,1.5,1.12,0.02,">1 nonsynonymous","N4T A14L A89V",3
"lib2","SARS-CoV-2","TGTCGAGGATCACCCG",9,119.57,9.47,-1.37,0.07,1.9,1.12,0,">1 nonsynonymous","K94A N107C",2
"lib2","SARS-CoV-2","TGTCGCACTAACAATT",6,37.09,6.06,-4.77,1.18,1.5,1.17,0.03,">1 nonsynonymous","W23R W106Y V153I",3
"lib2","SARS-CoV-2","TGTCGCGAACAGTATA",4,56.81,10.87,0.03,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCGCGACAATAAAG",1,1.86,NA,NA,NA,NA,NA,NA,"stop","K128I R136A G155N G166* V180K",5
"lib2","SARS-CoV-2","TGTCGCTTATAGGGGA",1,12.45,10.42,-0.41,0.06,3,1.04,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","TGTCGGAGAGATGAAA",1,0.66,NA,NA,NA,NA,NA,NA,"stop","R16V K132* R136K P161A",4
"lib2","SARS-CoV-2","TGTCGGCAATCACCGG",9,64.03,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","T15S S43L T85R R124T P169W",5
"lib2","SARS-CoV-2","TGTCGGGCCTGACAAA",2,0.46,NA,NA,NA,NA,NA,NA,"stop","R73* D98M",2
"lib2","SARS-CoV-2","TGTCGGTCGCCTGCGG",4,58.04,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A33V I142D C150S",3
"lib2","SARS-CoV-2","TGTCGGTTAATTAAAT",1,47.05,8.54,-2.29,0.1,2.91,1.08,0,">1 nonsynonymous","N120E N157L",2
"lib2","SARS-CoV-2","TGTCGTAATTCTATGT",1,22.15,10.21,-0.63,0.08,2.88,1.08,0,"1 nonsynonymous","G155L",1
"lib2","SARS-CoV-2","TGTCGTAGGCTAGATT",8,1.23,NA,NA,NA,NA,NA,NA,"stop","I28* D97V",2
"lib2","SARS-CoV-2","TGTCGTCGTTTTTGTC",2,11.87,NA,NA,NA,NA,NA,0.45,">1 nonsynonymous","Y91K C102G",2
"lib2","SARS-CoV-2","TGTCGTGGATATGACA",6,71.48,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","F8K Y93A Q176N",3
"lib2","SARS-CoV-2","TGTCGTTAATGACCGA",2,6.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7L I80F",2
"lib2","SARS-CoV-2","TGTCTAAATCACACGA",4,169.37,10.86,0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCTAAATTTACAGT",2,0.07,NA,NA,NA,NA,NA,NA,"stop","A105E Y119P N157* L162S T170L T201L",6
"lib2","SARS-CoV-2","TGTCTAACACACACAT",2,12.82,10.22,-0.62,0.07,2.96,1,0,">1 nonsynonymous","V32R P54V D90Y",3
"lib2","SARS-CoV-2","TGTCTAACACCGCTAG",4,78.42,10.64,-0.2,0.05,2.9,1.1,0,"1 nonsynonymous","G155A",1
"lib2","SARS-CoV-2","TGTCTAAGAAAAAAAG",6,51.31,10.01,-0.83,0.06,2.9,1.04,0,"1 nonsynonymous","G166S",1
"lib2","SARS-CoV-2","TGTCTAAGACAACGAC",13,35.43,9.3,-1.53,0.07,2.23,1.06,0,">1 nonsynonymous","V173P V181T",2
"lib2","SARS-CoV-2","TGTCTAAGCATTCGAT",6,198.65,8.61,-2.22,0.07,2.86,1.07,0,">1 nonsynonymous","A33V T148I G166L",3
"lib2","SARS-CoV-2","TGTCTAAGGCGGCCAT",3,23.7,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","R25I L125V T148Y F156L P169M",5
"lib2","SARS-CoV-2","TGTCTAAGTAACCCGC",13,7.35,NA,NA,NA,NA,NA,NA,"stop","L5V D34S S43T A81M A105C E135L Y159*",7
"lib2","SARS-CoV-2","TGTCTAATAATAAATT",5,0.47,NA,NA,NA,NA,NA,NA,"stop","N13S N58M S139P N157*",4
"lib2","SARS-CoV-2","TGTCTAATACACGCCA",9,73.21,9.28,-1.55,0.12,1.77,1.07,0.01,">1 nonsynonymous","F12P P197A",2
"lib2","SARS-CoV-2","TGTCTAATATCACACA",9,139.32,10.85,0.01,0.06,2.9,1.13,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","TGTCTAATCTCTTGGG",18,280.24,10.8,-0.03,0.04,2.92,1.08,0,">1 nonsynonymous","T55L F134G",2
"lib2","SARS-CoV-2","TGTCTACAAACGGCTT",3,40.13,10.13,-0.7,0.07,2.93,1.04,0,"1 nonsynonymous","C6S",1
"lib2","SARS-CoV-2","TGTCTACACTACCCTA",5,57.92,10.75,-0.09,0.02,2.96,1.04,0,">1 nonsynonymous","I2Y S139R",2
"lib2","SARS-CoV-2","TGTCTACGGATCCACA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","T3* T15* A22W D98M",4
"lib2","SARS-CoV-2","TGTCTACTAAACAGCC",1,1.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16F Y93L N107S",3
"lib2","SARS-CoV-2","TGTCTACTTCTCGGCT",12,165.14,10.79,-0.05,0.05,2.87,1.14,0,"1 nonsynonymous","N1R",1
"lib2","SARS-CoV-2","TGTCTATAAAGACAAC",4,64.76,10.1,-0.74,0.1,2.37,1.08,0,"1 nonsynonymous","E76T",1
"lib2","SARS-CoV-2","TGTCTATAATCTGTCA",1,38.66,8.12,-2.72,0.18,1.5,1.09,0.01,">1 nonsynonymous","C31A P54G L60A E186R L187M",5
"lib2","SARS-CoV-2","TGTCTATAATTCCTAA",6,0.66,NA,NA,NA,NA,NA,NA,"stop","N30* V37F D137V G155*",4
"lib2","SARS-CoV-2","TGTCTATAGTCAATAA",2,32.31,6.17,-4.67,1.28,1.5,1.17,0.04,">1 nonsynonymous","C61T D98L N107T Y178W",4
"lib2","SARS-CoV-2","TGTCTCAACCACCACT",2,59.64,9.08,-1.76,0.06,2.67,1.1,0,">1 nonsynonymous","T3R G9V N171E",3
"lib2","SARS-CoV-2","TGTCTCACGACTTTTC",6,28.48,6,-4.84,2,3,1.07,0,">1 nonsynonymous","E10H Y66E Y91P G101I",4
"lib2","SARS-CoV-2","TGTCTCATGCGATAGG",2,29.78,6.01,-4.83,0.57,1.5,1.09,0.01,">1 nonsynonymous","T85M W106C R136Y",3
"lib2","SARS-CoV-2","TGTCTCATTAACTGCG",5,40.68,6,-4.84,2,1.5,1.25,0.06,">1 nonsynonymous","N1G T46I Y91M F167D",4
"lib2","SARS-CoV-2","TGTCTCCCCCCTGGAA",2,18.31,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","T55V V77W S113Q",3
"lib2","SARS-CoV-2","TGTCTCGCCCCGCACT",14,0.57,NA,NA,NA,NA,NA,NA,"stop","K26* Y35E",2
"lib2","SARS-CoV-2","TGTCTCTCAAACGCTA",6,70.13,8.42,-2.42,0.13,2.93,1.1,0.01,"1 nonsynonymous","F126S",1
"lib2","SARS-CoV-2","TGTCTCTCGAGTATTA",5,63.72,10.73,-0.11,0.08,2.78,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCTCTCTCTAAGAA",4,13.41,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F99L G101E D112W K128V E154D T201S",6
"lib2","SARS-CoV-2","TGTCTCTGAGAATACC",14,284.1,10.53,-0.31,0.04,2.94,1.02,0,">1 nonsynonymous","N64H R136M",2
"lib2","SARS-CoV-2","TGTCTCTGTACTTTGT",2,52.55,6,-4.84,2,1.5,1.1,0.02,"1 nonsynonymous","P177Y",1
"lib2","SARS-CoV-2","TGTCTCTTGGCCTTCA",3,132.81,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","R16W R27N T100Y R136E Y175T",5
"lib2","SARS-CoV-2","TGTCTGAACGACCTCT",8,186.45,10.66,-0.17,0.02,2.99,1.02,0,"1 nonsynonymous","F47V",1
"lib2","SARS-CoV-2","TGTCTGCACTAAGGAA",4,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q163S K198Q",2
"lib2","SARS-CoV-2","TGTCTGGCTATCATAA",5,163.27,10.41,-0.42,0.03,2.91,1.05,0,">1 nonsynonymous","T15D H189F T201N",3
"lib2","SARS-CoV-2","TGTCTGGTAAATGAAT",1,17.07,10.21,-0.63,0.17,2.14,1.05,0.01,">1 nonsynonymous","F99I L122E",2
"lib2","SARS-CoV-2","TGTCTGGTGTTCCTCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F A42H Y91P P197T",4
"lib2","SARS-CoV-2","TGTCTGTACATTTGAT",3,108.44,10.83,-0.01,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCTGTGATTGTTAT",4,5.08,NA,NA,NA,NA,NA,NA,"stop","T3N A22* G172D",3
"lib2","SARS-CoV-2","TGTCTTAAAACAATTT",6,81.16,10.65,-0.19,0.05,2.95,1.06,0,"1 nonsynonymous","E10N",1
"lib2","SARS-CoV-2","TGTCTTAATCACTGGA",2,33.06,6,-4.84,2,1.5,1.36,0.05,">1 nonsynonymous","P133L V182Y",2
"lib2","SARS-CoV-2","TGTCTTAGGATGTGGG",5,149.6,10.8,-0.03,0.05,2.83,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTCTTATAACTAACA",8,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59A Q84P G116Q G146W G152R",5
"lib2","SARS-CoV-2","TGTCTTATTACATAAT",1,3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60S I72A A81E N118G",4
"lib2","SARS-CoV-2","TGTCTTCACACTCGGG",4,32.79,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D98K E135L Y175G V182L",4
"lib2","SARS-CoV-2","TGTCTTCAGTGTCAAC",2,8.48,6.54,-4.29,0.94,3,1.11,0.01,">1 nonsynonymous","T3K D34Y N107H S113W N130T",5
"lib2","SARS-CoV-2","TGTCTTCTTATAACTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43P R124D C195S",3
"lib2","SARS-CoV-2","TGTCTTGACGAGCTAA",3,85.32,10.33,-0.51,0.06,2.76,1.02,0,">1 nonsynonymous","P133N K199R",2
"lib2","SARS-CoV-2","TGTCTTGATGAAGAAA",2,46.52,10.63,-0.2,0.03,2.98,1.02,0,">1 nonsynonymous","A33V T201S",2
"lib2","SARS-CoV-2","TGTCTTGCAAGTCCAG",10,157.91,10.77,-0.06,0.03,2.98,1.03,0,">1 nonsynonymous","I2H V52L",2
"lib2","SARS-CoV-2","TGTCTTTAATAATTCA",3,151.38,9.39,-1.44,0.04,2.91,1.07,0,">1 nonsynonymous","I142L G146Q",2
"lib2","SARS-CoV-2","TGTCTTTGCTGAAGCC",2,35.62,9.46,-1.38,0.08,1.79,1.08,0,">1 nonsynonymous","Y35G K94A D97K V115L L122F",5
"lib2","SARS-CoV-2","TGTCTTTGGTTGGCGT",2,6.05,9.4,-1.44,0.19,2.11,1,0,"1 nonsynonymous","F185K",1
"lib2","SARS-CoV-2","TGTCTTTTAACTGACG",7,63.96,9.26,-1.58,0.08,1.69,1.11,0,">1 nonsynonymous","A105L I138V T148S",3
"lib2","SARS-CoV-2","TGTGAAAACAAGCCTA",3,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88E Q144K",2
"lib2","SARS-CoV-2","TGTGAAACAATACATA",5,55.15,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F99L W106V",2
"lib2","SARS-CoV-2","TGTGAAAGTAATACCA",2,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S113C N118D I142S",3
"lib2","SARS-CoV-2","TGTGAAAGTATACCCA",7,8.99,6.59,-4.25,0.35,1.5,1.07,0.01,">1 nonsynonymous","F99P K199M",2
"lib2","SARS-CoV-2","TGTGAAATATTGACTT",9,53.19,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y50S Y91S I104M F156K",4
"lib2","SARS-CoV-2","TGTGAAATCGTACACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55V I104M G152M N157E Q168Y",5
"lib2","SARS-CoV-2","TGTGAAATTGCCCAAA",2,28.47,9.09,-1.75,0.13,1.88,1.03,0.01,">1 nonsynonymous","I80M G155T",2
"lib2","SARS-CoV-2","TGTGAACATCTTATAC",1,13.15,10.67,-0.16,0.1,3,1.05,0,">1 nonsynonymous","D98N E186G",2
"lib2","SARS-CoV-2","TGTGAACCCCTTGACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30A T63R L95Q V103N P161Q",5
"lib2","SARS-CoV-2","TGTGAACCGATTTAAA",1,5.72,8.17,-2.67,0.16,2.4,1.04,0.01,">1 nonsynonymous","F99M L122S N157S",3
"lib2","SARS-CoV-2","TGTGAACCTATAAACT",3,0.28,NA,NA,NA,NA,NA,NA,"stop","G9* K56N T85Y D90*",4
"lib2","SARS-CoV-2","TGTGAAGAACGAAATG",3,75.11,10.8,-0.03,0.05,3,1.03,0,">1 nonsynonymous","T3W T100I",2
"lib2","SARS-CoV-2","TGTGAAGACGGAGGCA",8,142.26,9.67,-1.16,0.09,1.91,1.07,0,">1 nonsynonymous","A14T R127G",2
"lib2","SARS-CoV-2","TGTGAAGATGAACTGG",1,11.98,10.04,-0.79,0.1,2.95,1.08,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","TGTGAAGATTCACCTA",3,34.16,9.51,-1.32,0.11,1.89,1.12,0.01,">1 nonsynonymous","Y93F T100A",2
"lib2","SARS-CoV-2","TGTGAAGCAATACTTG",4,86.52,8.26,-2.58,0.16,2.86,1.04,0.01,">1 nonsynonymous","T3L Q163T Y175C",3
"lib2","SARS-CoV-2","TGTGAATAAAATCTAA",14,62.72,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L5V G83V D97S R127A Y143W",5
"lib2","SARS-CoV-2","TGTGAATATTCGATTG",11,336.05,7.04,-3.79,0.23,1.5,1.11,0.01,">1 nonsynonymous","L122G R127I E141F",3
"lib2","SARS-CoV-2","TGTGAATCCTTGTCCA",2,40.26,10.81,-0.02,0.06,3,1.03,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","TGTGAATTAAGATACA",14,67.28,9.79,-1.05,0.17,1.6,1.1,0.01,">1 nonsynonymous","S69R D90Y",2
"lib2","SARS-CoV-2","TGTGAATTACCGAGAA",5,143.42,9.99,-0.85,0.05,2.53,1.01,0,">1 nonsynonymous","L57K P149T A192E",3
"lib2","SARS-CoV-2","TGTGAATTATCCAATG",8,71.38,6,-4.84,2,2.45,1.2,0,">1 nonsynonymous","V11A T63G R179L",3
"lib2","SARS-CoV-2","TGTGAATTCACAAACC",1,23.67,10.7,-0.14,0.06,3,1,0,"1 nonsynonymous","P7T",1
"lib2","SARS-CoV-2","TGTGAATTCCAAGTGG",1,60.71,10.39,-0.44,0.05,2.81,1.12,0,">1 nonsynonymous","N120L N151C",2
"lib2","SARS-CoV-2","TGTGACACGCTATACT",9,92.2,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49G",1
"lib2","SARS-CoV-2","TGTGACAGACCGTACA",7,130.79,10.86,0.02,0.06,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGACAGCACTTACT",3,29.16,6.05,-4.79,1.1,1.5,1.32,0.03,">1 nonsynonymous","Y143Q Y178L",2
"lib2","SARS-CoV-2","TGTGACATACCAGTGC",6,15.16,8.79,-2.04,0.34,2,1.12,0.06,">1 nonsynonymous","C61Y G101C",2
"lib2","SARS-CoV-2","TGTGACATTATAAGTG",1,4.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140R P149M",2
"lib2","SARS-CoV-2","TGTGACCAAGGTGCAA",2,34.91,7.01,-3.83,0.35,1.5,1.11,0.02,"1 nonsynonymous","K94W",1
"lib2","SARS-CoV-2","TGTGACCACATAGCTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2Y G9V V103H",3
"lib2","SARS-CoV-2","TGTGACCACTAGGTTC",1,17.09,8.67,-2.16,0.46,1.5,1.02,0.07,"1 nonsynonymous","S184P",1
"lib2","SARS-CoV-2","TGTGACCATAATAGAA",3,132.93,10.19,-0.64,0.04,2.78,1.1,0,">1 nonsynonymous","F44S S53L",2
"lib2","SARS-CoV-2","TGTGACCCTAAAGTAC",10,24.33,6,-4.84,2,3,1.22,0,">1 nonsynonymous","W23V C49S D90P",3
"lib2","SARS-CoV-2","TGTGACCTAAAAAACC",11,1.66,NA,NA,NA,NA,NA,NA,"stop","L60T R78A A89Q K114*",4
"lib2","SARS-CoV-2","TGTGACCTGCTAAAGT",5,15.06,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","V103S",1
"lib2","SARS-CoV-2","TGTGACGAATACCTCC",8,97.45,10.82,-0.02,0.03,2.93,1.09,0,"1 nonsynonymous","L187H",1
"lib2","SARS-CoV-2","TGTGACGATATCGGAC",7,99.72,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","S45L C158F P177L",3
"lib2","SARS-CoV-2","TGTGACGATTTAAAAA",2,23.16,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","S41W V71K A81T C102L",4
"lib2","SARS-CoV-2","TGTGACTACATCCATT",9,174.49,8.4,-2.44,0.09,2.33,1.08,0,">1 nonsynonymous","N107C Y119L",2
"lib2","SARS-CoV-2","TGTGACTACTCTGAAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30L F99T N118A T148G",4
"lib2","SARS-CoV-2","TGTGACTAGCCTGATC",1,2.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95V I104K",2
"lib2","SARS-CoV-2","TGTGAGAAACGGTAAT",6,18.43,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N64R V103N L122Q",3
"lib2","SARS-CoV-2","TGTGAGAATCGTATAC",5,64.16,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","W23C L122E R127I L162G",4
"lib2","SARS-CoV-2","TGTGAGACCAGCCCTG",9,1,NA,NA,NA,NA,NA,NA,"stop","N1K N13T Q163*",3
"lib2","SARS-CoV-2","TGTGAGAGAGTGGAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L K128D",2
"lib2","SARS-CoV-2","TGTGAGCAATATCAAT",3,7.84,NA,NA,NA,NA,NA,NA,"stop","S19L L122*",2
"lib2","SARS-CoV-2","TGTGAGGACGATAACT",2,3.83,NA,NA,NA,NA,NA,NA,"stop","V37H Y91S Y123* T201Y",4
"lib2","SARS-CoV-2","TGTGAGGGCTTGGTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5K S19*",2
"lib2","SARS-CoV-2","TGTGAGGTATGGTGCA",2,15.81,7.85,-2.99,0.2,2.19,1.03,0.02,">1 nonsynonymous","L57K V153G G166D",3
"lib2","SARS-CoV-2","TGTGAGTACGGTTCTA",10,4.9,NA,NA,NA,NA,NA,NA,"stop","K56*",1
"lib2","SARS-CoV-2","TGTGAGTCTAAAAATC",2,6.77,10.74,-0.1,0.06,3,1,0,">1 nonsynonymous","N120S T140N",2
"lib2","SARS-CoV-2","TGTGAGTGAAAAAGCT",4,14.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87Y Y91T S113L S139A",4
"lib2","SARS-CoV-2","TGTGAGTTAACTACAA",1,1.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80S I142M Y178C",3
"lib2","SARS-CoV-2","TGTGAGTTTGAATACC",3,0,NA,NA,NA,NA,NA,NA,"stop","N64* G83Q T140N T170* T201K",5
"lib2","SARS-CoV-2","TGTGAGTTTGGTTACC",5,5.49,6.53,-4.3,2,1.5,1.39,0.06,">1 nonsynonymous","C61T L183P",2
"lib2","SARS-CoV-2","TGTGATAAACAAAAGC",2,68.89,9.66,-1.17,0.06,2.46,1,0,"1 nonsynonymous","S19E",1
"lib2","SARS-CoV-2","TGTGATACTAGTAGAG",1,64.41,10.85,0.01,0.05,2.87,1.14,0,"1 nonsynonymous","T201Q",1
"lib2","SARS-CoV-2","TGTGATACTGAAGGCT",2,1.18,NA,NA,NA,NA,NA,NA,"stop","R27L Y91* I142V",3
"lib2","SARS-CoV-2","TGTGATAGAGTAAGGA",3,42.42,7.11,-3.73,0.23,1.5,1.09,0.01,">1 nonsynonymous","D59E R124N",2
"lib2","SARS-CoV-2","TGTGATAGGACAACAA",3,41.12,9.85,-0.99,0.07,2.33,1.04,0,">1 nonsynonymous","R27L F99M K114E",3
"lib2","SARS-CoV-2","TGTGATATACATTCGT",7,37.94,10.27,-0.57,0.16,2.14,1.05,0.01,"1 nonsynonymous","V182C",1
"lib2","SARS-CoV-2","TGTGATATATCTAGAT",11,275.07,10.85,0.01,0.05,2.93,1.07,0,"1 nonsynonymous","Y50W",1
"lib2","SARS-CoV-2","TGTGATATGTAATAAA",1,21.6,10.95,0.11,0.13,2.81,1.19,0.01,"1 nonsynonymous","L5N",1
"lib2","SARS-CoV-2","TGTGATATTAATAAAA",3,33.73,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15Y K56W N107F",3
"lib2","SARS-CoV-2","TGTGATCAACCCGCTT",7,33.93,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","R25G N64R S113T",3
"lib2","SARS-CoV-2","TGTGATCAGTTAAAGT",12,126.89,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V37L S69E Y165Q V173S",4
"lib2","SARS-CoV-2","TGTGATCCAATTCGCT",9,114.42,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","N4I Y35H I104K N118D I138C Q163S",6
"lib2","SARS-CoV-2","TGTGATCTCACGATTA",2,43.76,9.34,-1.49,0.11,1.93,1.11,0,">1 nonsynonymous","C6Y T55E C61F T85C E141Q",5
"lib2","SARS-CoV-2","TGTGATGATCAGTTTG",5,104.07,10.71,-0.13,0.04,2.91,1.08,0,">1 nonsynonymous","F160L K198S",2
"lib2","SARS-CoV-2","TGTGATTATATTTAAT",5,88.61,10.81,-0.03,0.04,2.98,1.04,0,"1 nonsynonymous","L60F",1
"lib2","SARS-CoV-2","TGTGATTCCGATGAAA",1,11.91,6.19,-4.65,1.98,1.5,1.07,0.01,">1 nonsynonymous","T63S F70P T85H L162S",4
"lib2","SARS-CoV-2","TGTGATTGAGGATCCC",4,2.62,NA,NA,NA,NA,NA,NA,"stop","G9L F44* D90F W106T K128S",5
"lib2","SARS-CoV-2","TGTGCAAAAAAAATTA",17,417.43,8.83,-2.01,0.05,2.87,1.09,0,">1 nonsynonymous","D98M S113A Y119V P197N",4
"lib2","SARS-CoV-2","TGTGCAAAACTAACGG",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R P96L C150G",3
"lib2","SARS-CoV-2","TGTGCAAACGGACATT",4,86.33,10.82,-0.01,0.03,2.91,1.08,0,"1 nonsynonymous","P149S",1
"lib2","SARS-CoV-2","TGTGCAACCGATGAGT",1,6.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61N T201L",2
"lib2","SARS-CoV-2","TGTGCACAATAAACAA",2,20.23,6,-4.84,2,3,1.05,0,">1 nonsynonymous","V11P K56T D112G",3
"lib2","SARS-CoV-2","TGTGCACACAACAACT",4,133.02,10.96,0.12,0.06,2.97,1.05,0,">1 nonsynonymous","D59Y Y175W",2
"lib2","SARS-CoV-2","TGTGCACACGTTACCT",4,121.1,10.57,-0.27,0.04,2.94,1.04,0,">1 nonsynonymous","P7L L122Y",2
"lib2","SARS-CoV-2","TGTGCACCTAAAAAAT",22,395.22,6.25,-4.58,0.35,1.5,1.14,0.01,">1 nonsynonymous","N120M C150V",2
"lib2","SARS-CoV-2","TGTGCAGAACATAGGC",10,171.14,10.05,-0.78,0.08,2.43,1.02,0,">1 nonsynonymous","Y39I L95C",2
"lib2","SARS-CoV-2","TGTGCAGGGTTTCATT",13,171.52,10.84,0,0.05,2.96,1.06,0,"1 nonsynonymous","S53L",1
"lib2","SARS-CoV-2","TGTGCAGTCATAACTA",12,181.11,10.81,-0.03,0.05,2.89,1.12,0,">1 nonsynonymous","L5V P54Q",2
"lib2","SARS-CoV-2","TGTGCATAAGATTCCA",12,122.89,10.68,-0.16,0.04,2.91,1.12,0,"1 nonsynonymous","Y35V",1
"lib2","SARS-CoV-2","TGTGCATGAGGTGTTC",3,62.75,10.77,-0.07,0.03,3,1.01,0,">1 nonsynonymous","D59W L122A T201D",3
"lib2","SARS-CoV-2","TGTGCATTGCCATTAC",2,13.03,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V11C G51K T63V A105Q Y121L G166A",6
"lib2","SARS-CoV-2","TGTGCCAAATAGATTC",6,91.34,10.74,-0.09,0.03,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGCCATAAGAAGGG",2,23.43,10.89,0.06,0.08,2.9,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTGCCCTATCGGAAT",2,109.99,10.31,-0.53,0.05,2.88,1.09,0,">1 nonsynonymous","G9E Y178L",2
"lib2","SARS-CoV-2","TGTGCCCTGGGTTGCG",5,61.67,10.73,-0.11,0.05,2.98,1.05,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","TGTGCCGAGTCTCAAG",1,98.56,9.3,-1.54,0.05,2.96,1.02,0,">1 nonsynonymous","T3S D90Q G117S",3
"lib2","SARS-CoV-2","TGTGCCGGTAGTCGAA",5,595.1,9.15,-1.69,0.08,1.5,1.08,0,">1 nonsynonymous","N30Q F44R D90A",3
"lib2","SARS-CoV-2","TGTGCCGTCAAAAATA",7,135.17,10.5,-0.34,0.06,2.88,1.1,0,">1 nonsynonymous","T55M T85S G166N",3
"lib2","SARS-CoV-2","TGTGCCTCTCAATTAT",2,2.46,NA,NA,NA,NA,NA,NA,"stop","A33S L162*",2
"lib2","SARS-CoV-2","TGTGCCTGCTGCCACC",5,143.87,10.18,-0.65,0.04,2.82,1.01,0,">1 nonsynonymous","Y91A L122F",2
"lib2","SARS-CoV-2","TGTGCCTTGTCAAGCG",2,18.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F R73K F185Y",3
"lib2","SARS-CoV-2","TGTGCGAAACTGCAGA",13,90.2,8.72,-2.11,0.18,1.5,1.02,0.02,">1 nonsynonymous","D68T S139E",2
"lib2","SARS-CoV-2","TGTGCGACAAATTGCA",4,26.37,9.93,-0.91,0.13,2.5,1.04,0.01,">1 nonsynonymous","R27N S41H V77T S164N",4
"lib2","SARS-CoV-2","TGTGCGACGGGTAACC",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","TGTGCGCTGACTCGTG",6,51.94,6,-4.84,2,1.5,1.2,0.03,"1 nonsynonymous","L95W",1
"lib2","SARS-CoV-2","TGTGCGGGCAAACGAA",2,5.91,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","N4V Y50K S129N N157V",4
"lib2","SARS-CoV-2","TGTGCGGTCGAATTAT",4,0.84,NA,NA,NA,NA,NA,NA,"stop","Y21* A192H",2
"lib2","SARS-CoV-2","TGTGCGTACCACGCAA",7,75.59,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C61V V77E G86K C102V",4
"lib2","SARS-CoV-2","TGTGCGTTCCATTATC",5,33.91,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","W23T F62Q G117D V182Q",4
"lib2","SARS-CoV-2","TGTGCTAATATTTTTA",23,202.63,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F17I A89R Q144R P197H",4
"lib2","SARS-CoV-2","TGTGCTACCATGGACT",1,14.01,9.01,-1.83,0.17,1.91,1.2,0.01,">1 nonsynonymous","W106T N120L",2
"lib2","SARS-CoV-2","TGTGCTCAGCTGCTAC",3,115.18,10.73,-0.1,0.05,2.97,1.03,0,"1 nonsynonymous","I138R",1
"lib2","SARS-CoV-2","TGTGCTGGTATTAGCA",10,144.38,10.73,-0.1,0.05,2.94,1.06,0,"1 nonsynonymous","K48S",1
"lib2","SARS-CoV-2","TGTGCTGTAACTTCAA",2,87.15,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6F F12K V115C P161Y",4
"lib2","SARS-CoV-2","TGTGCTTCACGAGAAA",4,62.72,10.87,0.03,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGCTTGCTGCAAGG",6,114.18,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E135R P177F",2
"lib2","SARS-CoV-2","TGTGCTTGTATTGCTT",7,149.86,10.84,0,0.04,2.9,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGGAAATCGCATCA",6,4.19,NA,NA,NA,NA,NA,NA,"stop","F8S A33* K56T",3
"lib2","SARS-CoV-2","TGTGGAAATGAACTGT",8,2.27,NA,NA,NA,NA,NA,NA,"stop","F17P L95W T100* Q144Y L162V",5
"lib2","SARS-CoV-2","TGTGGAACCAATTCAA",8,1.31,NA,NA,NA,NA,NA,NA,"stop","T15S K87E A89C N107L T140* G174I",6
"lib2","SARS-CoV-2","TGTGGAAGATTCAACG",1,30.01,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N107F E141S",2
"lib2","SARS-CoV-2","TGTGGAAGCACACTAC",1,26.01,10.87,0.03,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGGACCCGAGATTC",9,158.76,10.77,-0.06,0.04,3,1.02,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","TGTGGACCGAACGTAG",16,221.89,10.42,-0.41,0.05,2.72,1.04,0,">1 nonsynonymous","N13V L122R",2
"lib2","SARS-CoV-2","TGTGGACCGGGGGCAA",1,23.68,10.86,0.02,0.08,2.94,1.09,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","TGTGGACGACTTTAAA",1,69.25,10.37,-0.46,0.05,2.94,1.06,0,">1 nonsynonymous","C6E Y35F",2
"lib2","SARS-CoV-2","TGTGGACTGCTTTTCC",3,35.98,10.07,-0.76,0.06,2.78,1.05,0,">1 nonsynonymous","S41E D75W",2
"lib2","SARS-CoV-2","TGTGGAGACAAATCCG",4,13.5,10.8,-0.04,0.05,2.81,1.17,0,"1 nonsynonymous","K56N",1
"lib2","SARS-CoV-2","TGTGGAGAGTATAACG",6,78.2,6,-4.84,1.87,1.5,1.12,0,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TGTGGAGCTAAACGAC",9,181.77,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V37G N64T I88D G146R",4
"lib2","SARS-CoV-2","TGTGGAGGACAGACTC",7,3.5,NA,NA,NA,NA,NA,NA,"stop","W23* D68A D97A N107W",4
"lib2","SARS-CoV-2","TGTGGAGTAGAGTGAA",1,55.49,9.47,-1.37,0.04,2.89,1.14,0,"1 nonsynonymous","Y119Q",1
"lib2","SARS-CoV-2","TGTGGATAATCAGACA",1,16.4,10.79,-0.04,0.08,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGGCAGCCGCATTC",16,213.27,10.35,-0.49,0.03,2.98,1.02,0,">1 nonsynonymous","R16F D97I L125W",3
"lib2","SARS-CoV-2","TGTGGCCAAAAATACT",4,83.03,6,-4.84,2,3,1.1,0,">1 nonsynonymous","L38C K94H N157T",3
"lib2","SARS-CoV-2","TGTGGCCACACAATAA",13,37.51,6,-4.84,2,1.5,1.37,0.07,">1 nonsynonymous","N13I G86R V173C",3
"lib2","SARS-CoV-2","TGTGGCCAGGGTACAC",6,31.6,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F12G Q168V V173A",3
"lib2","SARS-CoV-2","TGTGGCCTAAGATTGC",2,1.24,NA,NA,NA,NA,NA,NA,"stop","G9L S36F I80* K198T",4
"lib2","SARS-CoV-2","TGTGGCTTGCTGGGCA",1,4.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41L F70I",2
"lib2","SARS-CoV-2","TGTGGGACATAACCAC",1,17.31,6.52,-4.32,0.42,1.5,1.12,0.02,">1 nonsynonymous","G9R R179I",2
"lib2","SARS-CoV-2","TGTGGGGCCGGTATCA",8,161.91,6.11,-4.73,0.6,1.5,1.18,0.01,">1 nonsynonymous","V37F G86T Y119S L131A C150G Y178G K199M",7
"lib2","SARS-CoV-2","TGTGGGTACAGTTACG",7,24.91,6,-4.84,2,3,1.14,0.03,">1 nonsynonymous","N13S N30L Y165T",3
"lib2","SARS-CoV-2","TGTGGGTTTCATTAAA",1,66.23,10.31,-0.53,0.04,2.86,1.02,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","TGTGGTAAAACATACT",12,177.78,10.04,-0.79,0.04,2.88,1.05,0,">1 nonsynonymous","N64M Q79K K87T",3
"lib2","SARS-CoV-2","TGTGGTAACAAGGTTT",1,20.57,10.75,-0.09,0.07,3,1.03,0,">1 nonsynonymous","P54T F160W",2
"lib2","SARS-CoV-2","TGTGGTAATCCCGCGG",3,51.19,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","W23I Y35A G86Q K199V",4
"lib2","SARS-CoV-2","TGTGGTACAATACTGG",4,17.21,8.45,-2.39,0.23,2.02,1.11,0.02,">1 nonsynonymous","D90T G146E",2
"lib2","SARS-CoV-2","TGTGGTACTTCCTGAA",2,37.17,10.72,-0.11,0.05,2.92,1.08,0,"1 nonsynonymous","D97R",1
"lib2","SARS-CoV-2","TGTGGTAGAATGGGAG",6,628.44,8.49,-2.35,0.1,1.5,1.09,0,">1 nonsynonymous","F126L D137S S164N",3
"lib2","SARS-CoV-2","TGTGGTATAAATTAAA",2,8.41,8.9,-1.94,0.27,1.73,1.11,0.02,">1 nonsynonymous","A14V A81K T100K T148L",4
"lib2","SARS-CoV-2","TGTGGTATTCAAGAGA",11,3.84,NA,NA,NA,NA,NA,NA,"stop","A42S G86R I142*",3
"lib2","SARS-CoV-2","TGTGGTCAGAATGAAC",6,101.03,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N40W D98K G117E R127Y E135C",5
"lib2","SARS-CoV-2","TGTGGTCTTTGAAGGG",4,25.54,6.1,-4.74,0.74,1.5,1.14,0.02,">1 nonsynonymous","A105P K132T G155Q",3
"lib2","SARS-CoV-2","TGTGGTGAACACAAAC",1,30.08,9.31,-1.53,0.15,1.96,1.01,0.02,">1 nonsynonymous","Y178K T201C",2
"lib2","SARS-CoV-2","TGTGGTGAAGCCTACA",2,0,NA,NA,NA,NA,NA,NA,"stop","G86C L131T N171*",3
"lib2","SARS-CoV-2","TGTGGTGTCACCATCT",2,21.48,10.83,-0.01,0.05,2.87,1.12,0,"1 nonsynonymous","V65L",1
"lib2","SARS-CoV-2","TGTGGTGTCATTATTC",5,36.61,9.31,-1.53,0.17,1.59,1.09,0.02,">1 nonsynonymous","K26Q V77K",2
"lib2","SARS-CoV-2","TGTGGTTAAACAAAAT",1,35.03,10.95,0.11,0.07,2.88,1.09,0,"1 nonsynonymous","N24S",1
"lib2","SARS-CoV-2","TGTGGTTATGATATGA",1,27.06,9.53,-1.31,0.13,2.15,1,0.01,">1 nonsynonymous","C6G S53F T140A L188I",4
"lib2","SARS-CoV-2","TGTGGTTCAATACTAA",6,124.14,8.45,-2.39,0.14,2.14,1.09,0.01,">1 nonsynonymous","S41T T85H A89V Y119W",4
"lib2","SARS-CoV-2","TGTGGTTTGGTAGGGA",3,25.4,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","Y50S G86R Q168L",3
"lib2","SARS-CoV-2","TGTGTAAAGGTTTACG",5,20.65,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","K87R N92A L183S",3
"lib2","SARS-CoV-2","TGTGTAACTCGCTTCA",13,138.81,10.84,0,0.05,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTGTAAGGTAAAAAT",2,28.26,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","K87F V153M G172V",3
"lib2","SARS-CoV-2","TGTGTAATACAAACGT",3,14.56,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","V103Q T170S",2
"lib2","SARS-CoV-2","TGTGTAATTCTACGTG",5,65.4,8.69,-2.15,0.07,2.03,1.06,0,">1 nonsynonymous","N107T K114Y",2
"lib2","SARS-CoV-2","TGTGTACATAACTTCA",4,30.54,10.04,-0.79,0.15,2.44,1.17,0.01,">1 nonsynonymous","D59M T85L",2
"lib2","SARS-CoV-2","TGTGTACCTCGGATTG",1,0.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5V P7H F12G T46C S147R H189C",6
"lib2","SARS-CoV-2","TGTGTACGCCGTATAA",3,66.14,8.22,-2.62,0.21,1.88,1.1,0.02,">1 nonsynonymous","G117R G152T L183I",3
"lib2","SARS-CoV-2","TGTGTATACAAACGTA",5,205.9,10.19,-0.64,0.02,2.84,1.03,0,">1 nonsynonymous","A42T Y91K",2
"lib2","SARS-CoV-2","TGTGTCAAGGATATAT",10,39.01,6.41,-4.42,0.82,1.5,1.2,0.05,">1 nonsynonymous","S41F F99T D112S",3
"lib2","SARS-CoV-2","TGTGTCATATGGGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","L122* F185Y",2
"lib2","SARS-CoV-2","TGTGTCCAAATTTAAG",3,8.57,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","F44R I72E A105R K128W",4
"lib2","SARS-CoV-2","TGTGTCCAATACAGGG",3,33.68,6,-4.84,0.93,1.5,1.07,0,">1 nonsynonymous","Y21R R127I",2
"lib2","SARS-CoV-2","TGTGTCCACTAGCGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","I2P D90W I142*",3
"lib2","SARS-CoV-2","TGTGTCCCGCAAAATC",1,15.53,10.25,-0.58,0.03,2.96,1,0,">1 nonsynonymous","S41P Y121L",2
"lib2","SARS-CoV-2","TGTGTCCTTAATGATT",1,29.01,10.37,-0.46,0.07,2.84,1.14,0,"1 nonsynonymous","E10I",1
"lib2","SARS-CoV-2","TGTGTCGTTATAGGTG",5,0.42,NA,NA,NA,NA,NA,NA,"stop","L5N V37* T55M V77* A81N N118T L131K T170R S200K",9
"lib2","SARS-CoV-2","TGTGTCTATAAAGTCC",2,71.2,9.97,-0.87,0.05,2.49,1.05,0,">1 nonsynonymous","D34L T201N",2
"lib2","SARS-CoV-2","TGTGTCTGAAGTTCTT",2,37.12,10.85,0.01,0.07,2.89,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTGTCTTTATTGTAG",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R A14R S53Y W106S G116K N151R N171Y",7
"lib2","SARS-CoV-2","TGTGTGCACAGATACA",14,107.35,6,-4.84,1.88,1.5,1.17,0.02,">1 nonsynonymous","V37W L95Y",2
"lib2","SARS-CoV-2","TGTGTGCCTTCCTGAG",2,45.69,10.25,-0.59,0.05,2.91,1.12,0,">1 nonsynonymous","K87R R136V",2
"lib2","SARS-CoV-2","TGTGTGCGGAACTTAA",11,170.88,10.2,-0.63,0.03,2.89,1.04,0,"1 nonsynonymous","G155W",1
"lib2","SARS-CoV-2","TGTGTGGCACTAGAGC",11,23.36,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F8G Q84M I104T C158T",4
"lib2","SARS-CoV-2","TGTGTTCAAAGGCGAG",16,0.63,NA,NA,NA,NA,NA,NA,"stop","C6G D68* Y91L P149W",4
"lib2","SARS-CoV-2","TGTGTTCAGATAGACT",3,31.68,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A89L L131S",2
"lib2","SARS-CoV-2","TGTGTTCTAAATCCAT",11,98.34,7.87,-2.97,0.17,1.5,1.12,0.01,">1 nonsynonymous","L57S D90E T140W",3
"lib2","SARS-CoV-2","TGTGTTGACGCGCAAG",5,62.82,7.66,-3.17,0.19,1.64,1.17,0.01,">1 nonsynonymous","W23V G174M",2
"lib2","SARS-CoV-2","TGTGTTGTCTAAGCTG",3,73.87,10.09,-0.75,0.04,2.89,1.03,0,">1 nonsynonymous","T15D S129P",2
"lib2","SARS-CoV-2","TGTGTTTACCAACCGG",1,23.82,10.15,-0.68,0.08,2.85,1.03,0,"1 nonsynonymous","Y91A",1
"lib2","SARS-CoV-2","TGTGTTTGGGTAATAG",2,0.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48G L95P E141N V153F",4
"lib2","SARS-CoV-2","TGTTAAAAAAAGCACA",1,9.43,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T3Y R25M P82I T170L",4
"lib2","SARS-CoV-2","TGTTAAAAACATACAA",2,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44D Y165K Q176R",3
"lib2","SARS-CoV-2","TGTTAAAAAGAAGCGC",1,3.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14S V37E S53I K87G F134A",5
"lib2","SARS-CoV-2","TGTTAAAAAGCAGATT",1,6.95,6.26,-4.58,0.7,1.5,1.08,0.02,">1 nonsynonymous","S19Y S45N P133V",3
"lib2","SARS-CoV-2","TGTTAAAAATCTAGCA",2,19.34,7.07,-3.76,0.38,1.5,1.12,0.06,">1 nonsynonymous","V77K D90L N107M",3
"lib2","SARS-CoV-2","TGTTAAAACATATACA",1,26.39,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","V103A C150L",2
"lib2","SARS-CoV-2","TGTTAAAACGGGCATT",1,64.61,10.89,0.05,0.06,2.92,1.08,0,">1 nonsynonymous","L5P R16T N151H",3
"lib2","SARS-CoV-2","TGTTAAAAGGATGTCA",3,24.97,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","A14Q S36T F47G Y123H K128S",5
"lib2","SARS-CoV-2","TGTTAAAAGGCAGAAT",4,19.23,9.14,-1.7,0.23,1.59,1.12,0.03,">1 nonsynonymous","V65N E141M",2
"lib2","SARS-CoV-2","TGTTAAAAGTATCGAA",4,129.13,10.23,-0.61,0.05,2.83,1.05,0,"1 nonsynonymous","L57N",1
"lib2","SARS-CoV-2","TGTTAAAATATCCTTT",1,10.25,9.02,-1.81,0.37,1.5,1.07,0.04,"1 nonsynonymous","K94I",1
"lib2","SARS-CoV-2","TGTTAAAGATAGTAAT",1,36.41,6.13,-4.71,0.9,1.5,1.22,0.02,">1 nonsynonymous","W23K D34C A42W S164I",4
"lib2","SARS-CoV-2","TGTTAAATAAGAATTA",3,45.92,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y50P Y91W N157P L187F",4
"lib2","SARS-CoV-2","TGTTAAATCCCCGCGC",3,20.71,10.3,-0.54,0.08,2.82,1,0,">1 nonsynonymous","N13E V37R P149M",3
"lib2","SARS-CoV-2","TGTTAAATCTCGAGAA",6,120.11,10.82,-0.02,0.05,2.86,1.1,0,"1 nonsynonymous","T201E",1
"lib2","SARS-CoV-2","TGTTAAATTTAAATGG",6,34.35,6,-4.84,2,3,1.4,0.02,">1 nonsynonymous","F99I R136C P191Y",3
"lib2","SARS-CoV-2","TGTTAAATTTTAAAAA",1,50.31,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y159V G166H",2
"lib2","SARS-CoV-2","TGTTAACACAAACTGT",2,9.56,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","G86R G155C",2
"lib2","SARS-CoV-2","TGTTAACACTTAACGG",1,6.32,9.86,-0.97,0.11,2.11,1,0.01,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TGTTAACATCCCATCT",4,12.86,10.04,-0.8,0.13,1.91,1.02,0,">1 nonsynonymous","R27M P82V",2
"lib2","SARS-CoV-2","TGTTAACCAAGTCTTA",3,117.29,10.7,-0.13,0.04,2.93,1.07,0,">1 nonsynonymous","V32L N40K",2
"lib2","SARS-CoV-2","TGTTAACCCGTCGACC",22,226.28,10.16,-0.68,0.06,2.68,1.06,0,">1 nonsynonymous","K56L A81C",2
"lib2","SARS-CoV-2","TGTTAACCCGTTTCAA",1,23.65,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","P82G D112E E141V Q168M",4
"lib2","SARS-CoV-2","TGTTAACCGAAACATA",4,1.96,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V11S",1
"lib2","SARS-CoV-2","TGTTAAGAGGCCGAAG",9,106.1,9.6,-1.23,0.05,1.87,1.05,0,">1 nonsynonymous","A33L G83N L95M F134N E141R E186S",6
"lib2","SARS-CoV-2","TGTTAAGCGCCTCACC",1,1.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E76T F167G H189L",3
"lib2","SARS-CoV-2","TGTTAAGTATCGCCCC",14,262.4,10.73,-0.1,0.03,2.91,1.09,0,"1 nonsynonymous","T55I",1
"lib2","SARS-CoV-2","TGTTAAGTGTGTGTCT",1,43.7,10.89,0.05,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTAATAGTAAAACT",5,75.33,9.48,-1.36,0.07,1.88,1.08,0,">1 nonsynonymous","R16I G86S",2
"lib2","SARS-CoV-2","TGTTAATTGTAAAAGG",2,0.63,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","TGTTACAACACCTCAC",1,6.94,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14V S43M Q84E A105C P161I F167D T201Q",7
"lib2","SARS-CoV-2","TGTTACAACGGAAAAT",12,186.51,10.68,-0.16,0.04,2.95,1.07,0,">1 nonsynonymous","T46Y P54V",2
"lib2","SARS-CoV-2","TGTTACAACGTCCTTA",7,42.25,8.7,-2.14,0.3,1.54,1.2,0.05,">1 nonsynonymous","A14L D90F D97I",3
"lib2","SARS-CoV-2","TGTTACACTTAAGAGA",2,26.44,10.36,-0.47,0.08,2.87,1.01,0,">1 nonsynonymous","T85W P149I",2
"lib2","SARS-CoV-2","TGTTACAGACATAAAT",4,0.18,NA,NA,NA,NA,NA,NA,"stop","L57N D90G Y121* T148I E154S",5
"lib2","SARS-CoV-2","TGTTACAGACCATTAC",3,39.38,8.84,-2,0.23,1.61,1.06,0.02,">1 nonsynonymous","L5E E10I K94Q G116H",4
"lib2","SARS-CoV-2","TGTTACATAATCCTAA",13,95.31,10.55,-0.29,0.03,2.92,1.09,0,">1 nonsynonymous","K56S K87V S139T P197E",4
"lib2","SARS-CoV-2","TGTTACATAATCGAAG",11,141.93,10.85,0.02,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTACATCAAATCCT",3,152.63,10.71,-0.13,0.03,2.98,1.02,0,">1 nonsynonymous","T85Q S129Y",2
"lib2","SARS-CoV-2","TGTTACATTCTTCGAA",3,36.45,9.35,-1.49,0.1,2.42,1.05,0,"1 nonsynonymous","D112L",1
"lib2","SARS-CoV-2","TGTTACCATGCACGAA",1,6.72,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T3Q G74P D90I V115C",4
"lib2","SARS-CoV-2","TGTTACCCCTAACGAT",11,280.33,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","A14S C49I E141G Y178G",4
"lib2","SARS-CoV-2","TGTTACCTTTCTTAAC",7,0.18,NA,NA,NA,NA,NA,NA,"stop","A81* K94P",2
"lib2","SARS-CoV-2","TGTTACGAAATCCTTA",2,16.34,10.11,-0.73,0.1,2.72,1.13,0.01,">1 nonsynonymous","G9S D34G T55S",3
"lib2","SARS-CoV-2","TGTTACGATCCCGACA",7,474.29,9.46,-1.38,0.04,2.94,1.07,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","TGTTACGCGAAAATGT",4,1.82,NA,NA,NA,NA,NA,NA,"stop","K48* D98* L122K C150K L162R G174W",6
"lib2","SARS-CoV-2","TGTTACGGGCCTCAAG",8,6.16,NA,NA,NA,NA,NA,NA,"stop","K56* N64P L95A G101E I142W V173D",6
"lib2","SARS-CoV-2","TGTTACGTTATGAATT",5,73.2,6,-4.84,0.75,1.5,1.15,0.01,">1 nonsynonymous","D68T P149L Y178V",3
"lib2","SARS-CoV-2","TGTTACTAACAGTGAA",17,318.56,10.86,0.03,0.04,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTACTAATACTAAG",2,21.82,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","L95H Y178C",2
"lib2","SARS-CoV-2","TGTTACTAGCAATTAA",21,397.22,6.75,-4.08,0.19,1.5,1.13,0.01,">1 nonsynonymous","P54G Y175T",2
"lib2","SARS-CoV-2","TGTTACTAGGCCCTTA",6,118.25,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","V37N N92Q Y119V P133H F156V T201M",6
"lib2","SARS-CoV-2","TGTTACTGAGAGCTGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Q K132N",2
"lib2","SARS-CoV-2","TGTTACTTCCATTAGA",3,51.55,10.77,-0.07,0.05,2.94,1.06,0,">1 nonsynonymous","T55S K114R",2
"lib2","SARS-CoV-2","TGTTACTTGAATGGTG",7,25.63,6,-4.84,1.96,2.38,1.28,0.05,">1 nonsynonymous","P7L N13S V20A D34V V181A",5
"lib2","SARS-CoV-2","TGTTACTTGTAATATG",5,43.97,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","S45T G51W E76S G152N",4
"lib2","SARS-CoV-2","TGTTAGAAATCAATAA",3,39.92,9.16,-1.68,0.11,1.86,1.05,0.01,">1 nonsynonymous","G9W F44E S139L",3
"lib2","SARS-CoV-2","TGTTAGAATTATTAAT",12,53.26,6,-4.84,2,1.88,1.15,0,">1 nonsynonymous","C6R V11I A42G A89F K114F F167Q",6
"lib2","SARS-CoV-2","TGTTAGACCGACTGAA",7,72.56,10.52,-0.31,0.12,2.63,1.03,0.01,">1 nonsynonymous","E76W Q79F Y123V",3
"lib2","SARS-CoV-2","TGTTAGACTATGTCGA",5,80.68,10.56,-0.28,0.04,2.91,1.05,0,">1 nonsynonymous","G116I E154R",2
"lib2","SARS-CoV-2","TGTTAGACTTCTTATT",3,107.04,10.7,-0.14,0.04,2.85,1.11,0,"1 nonsynonymous","K198A",1
"lib2","SARS-CoV-2","TGTTAGAGAGTTTCCT",19,468.14,8.48,-2.35,0.09,2.72,1.08,0,"1 nonsynonymous","S113I",1
"lib2","SARS-CoV-2","TGTTAGATAACCAACA",3,19.6,8.4,-2.43,0.07,2,1.01,0,">1 nonsynonymous","D34L G51Y V71L I88N Y119H S129L",6
"lib2","SARS-CoV-2","TGTTAGATAGATTACT",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44G L111D Y143N",3
"lib2","SARS-CoV-2","TGTTAGATATTACAAG",8,72.14,10.78,-0.06,0.06,2.89,1.11,0,">1 nonsynonymous","N40S T201W",2
"lib2","SARS-CoV-2","TGTTAGATCAAGGTCG",2,22.84,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TGTTAGCAAAGGTAAA",3,19.66,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V20M P54Q L60C K94H E154N T201V",6
"lib2","SARS-CoV-2","TGTTAGCATCACAGCC",8,2.39,NA,NA,NA,NA,NA,NA,"stop","P7V E76* Y123T T148N",4
"lib2","SARS-CoV-2","TGTTAGGACCGTACTT",19,115.89,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V71R N92L N110S",3
"lib2","SARS-CoV-2","TGTTAGGCAAAGTTCA",1,33.03,10.86,0.02,0.09,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTAGGGGTTGACAT",8,152.64,10.68,-0.15,0.04,2.91,1.07,0,"1 nonsynonymous","L122D",1
"lib2","SARS-CoV-2","TGTTAGGTCTGTTGAA",2,62.62,10.33,-0.5,0.04,2.92,1.01,0,"1 nonsynonymous","E135R",1
"lib2","SARS-CoV-2","TGTTAGGTGCCTCCCA",2,27.23,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","N30S V180Y",2
"lib2","SARS-CoV-2","TGTTAGTAGATCCCGT",1,31.81,10.71,-0.13,0.08,2.89,1.12,0,"1 nonsynonymous","S43L",1
"lib2","SARS-CoV-2","TGTTAGTTCGGCCCCA",11,252.65,9.04,-1.79,0.04,2.91,1.08,0,"1 nonsynonymous","A145Y",1
"lib2","SARS-CoV-2","TGTTAGTTTGCCGGCT",3,71.67,10.77,-0.07,0.05,2.88,1.12,0,">1 nonsynonymous","E141K T201S",2
"lib2","SARS-CoV-2","TGTTATAAGAGCCAGT",3,73.28,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y35D Q84C S108D",3
"lib2","SARS-CoV-2","TGTTATAAGCTTTGAT",5,114.27,9.07,-1.77,0.06,2.79,1.1,0,">1 nonsynonymous","N109C Y119P",2
"lib2","SARS-CoV-2","TGTTATAATTGCATCG",1,42.55,8.63,-2.21,0.09,2.81,1.07,0,">1 nonsynonymous","Y143S T201A",2
"lib2","SARS-CoV-2","TGTTATACCCAGTTCG",6,28.94,6,-4.84,2,3,1.16,0,">1 nonsynonymous","E10V D97W D112N L131P",4
"lib2","SARS-CoV-2","TGTTATAGAGAAATAC",1,11.33,10.71,-0.12,0.06,2.94,1.03,0,"1 nonsynonymous","N120W",1
"lib2","SARS-CoV-2","TGTTATATACAATCCT",8,174.92,10.12,-0.72,0.03,2.83,1.07,0,">1 nonsynonymous","E10R N171S S184V",3
"lib2","SARS-CoV-2","TGTTATCCATTAGTCT",1,6.78,10.51,-0.32,0.06,3,1.02,0,">1 nonsynonymous","S36W A190S",2
"lib2","SARS-CoV-2","TGTTATGACAATATTA",15,278.89,10.24,-0.6,0.04,2.72,1.06,0,"1 nonsynonymous","F134V",1
"lib2","SARS-CoV-2","TGTTATGACTTGTCCT",4,79.35,10.01,-0.83,0.08,2.6,1.01,0,">1 nonsynonymous","N1K F134I",2
"lib2","SARS-CoV-2","TGTTATGAGTGCAGGG",4,83.57,10.76,-0.07,0.03,2.92,1.1,0,">1 nonsynonymous","D97Q N171M G196W",3
"lib2","SARS-CoV-2","TGTTATGGGGCACCAC",9,119.13,7.96,-2.88,0.09,2.29,1.12,0,"1 nonsynonymous","G172A",1
"lib2","SARS-CoV-2","TGTTATGGTTAACTGG",6,60.47,10.87,0.04,0.08,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTATTAGCCAGACA",10,87.14,6.25,-4.59,0.51,1.51,1.18,0.01,">1 nonsynonymous","S29L T100V V181Y",3
"lib2","SARS-CoV-2","TGTTATTAGTATTAGT",10,159.65,10.87,0.04,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTTATTGCACTTGAC",2,53.49,10.08,-0.76,0.13,2.7,1,0.01,">1 nonsynonymous","R16L Y66C K128A",3
"lib2","SARS-CoV-2","TGTTATTTGTTGTACT",5,80.19,6.08,-4.76,0.78,1.5,1.17,0.02,">1 nonsynonymous","D90T P149S F167V",3
"lib2","SARS-CoV-2","TGTTCAAAATTGATAT",5,125.15,8.51,-2.33,0.08,2.37,1.13,0,">1 nonsynonymous","G116M Y121A",2
"lib2","SARS-CoV-2","TGTTCAAACAAAACAG",5,63.23,8.55,-2.29,0.11,2.33,1.05,0.01,">1 nonsynonymous","K94S Y119Q",2
"lib2","SARS-CoV-2","TGTTCAAACGGGATAC",3,21.31,6,-4.84,2,3,1.12,0,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TGTTCAACGGAGCTGT",4,54.39,9.78,-1.06,0.11,1.85,1.05,0.01,"1 nonsynonymous","P82A",1
"lib2","SARS-CoV-2","TGTTCAACGGGTGGAT",1,3.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1S K26N A42S I88Y D98V",5
"lib2","SARS-CoV-2","TGTTCAACTCATAAAT",5,45.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L N24W N64T L125P",4
"lib2","SARS-CoV-2","TGTTCAAGCCCGCGGA",11,42.65,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","N4K A42F D68L G86P K132R P161R",6
"lib2","SARS-CoV-2","TGTTCACCACTATCTC",4,59.18,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","W106T Y119I L125C",3
"lib2","SARS-CoV-2","TGTTCACCGTTAGATA",8,35.25,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T15D C31S K94G G146L",4
"lib2","SARS-CoV-2","TGTTCACGCATTCAGC",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N1* N13S A89L F160G",4
"lib2","SARS-CoV-2","TGTTCACTACTAATAC",8,173.06,9.64,-1.2,0.03,2.82,1.05,0,">1 nonsynonymous","G51S A145E",2
"lib2","SARS-CoV-2","TGTTCAGAAAAAAAAC",1,70.3,6,-4.84,2,3,1.13,0,">1 nonsynonymous","E10M L57C S69V Y91R R127L I138K F167V Y178M",8
"lib2","SARS-CoV-2","TGTTCAGAAGTATTCC",2,1.58,NA,NA,NA,NA,NA,NA,"stop","S45* V103L T201*",3
"lib2","SARS-CoV-2","TGTTCAGATACGCATA",2,8.6,10.04,-0.79,0.24,2.12,1,0.04,">1 nonsynonymous","L5R A42V F47S I138D",4
"lib2","SARS-CoV-2","TGTTCAGCCCTTCACA",3,34.73,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","C6V L60V A89I I104S L188Y",5
"lib2","SARS-CoV-2","TGTTCAGGCGAATCAA",6,49.05,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L60V V103F G172R K198W",4
"lib2","SARS-CoV-2","TGTTCAGTAAGGCTTA",11,158.23,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","V37E L60A F70T N109S G152I",5
"lib2","SARS-CoV-2","TGTTCATAAGGCCAAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D97G Q176*",2
"lib2","SARS-CoV-2","TGTTCATAGCGTTACG",5,34.5,10.73,-0.11,0.08,2.9,1.08,0,"1 nonsynonymous","F8I",1
"lib2","SARS-CoV-2","TGTTCATATATAAAAC",11,26.97,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C61R L95D G101D V103M G146L G155P",6
"lib2","SARS-CoV-2","TGTTCATCAAGCTAGG",3,49.98,8.57,-2.26,0.19,1.79,1.12,0.02,">1 nonsynonymous","T55V D98I Y119L P149A",4
"lib2","SARS-CoV-2","TGTTCATCTGACATCT",1,0.43,NA,NA,NA,NA,NA,NA,"stop","D75* I88T",2
"lib2","SARS-CoV-2","TGTTCATTATGAGGAA",2,23.64,10.78,-0.05,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTCCAAGAACCAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","S36Y D59P K87C I138R S200*",5
"lib2","SARS-CoV-2","TGTTCCACCCTTTATC",6,52.23,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","A14Y G86V C195A",3
"lib2","SARS-CoV-2","TGTTCCCGCCCCCGGT",1,86.34,8.39,-2.44,0.13,3,1,0.01,">1 nonsynonymous","A145H F156S Y178H",3
"lib2","SARS-CoV-2","TGTTCCCTACCATTTT",7,15.5,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L60D R127E V173R",3
"lib2","SARS-CoV-2","TGTTCCGATAACTGAC",1,1.87,NA,NA,NA,NA,NA,NA,"stop","L5Y R16* Y39S F44T I88S",5
"lib2","SARS-CoV-2","TGTTCCGTGGAAAAGT",2,16.41,6.28,-4.56,1.09,1.5,1.2,0.06,">1 nonsynonymous","P82K T140P T201L",3
"lib2","SARS-CoV-2","TGTTCCTTAAATAACA",1,4.05,NA,NA,NA,NA,NA,NA,"stop","S19* T201L",2
"lib2","SARS-CoV-2","TGTTCGATTTTTAGAT",6,54.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38D D90V Y159A",3
"lib2","SARS-CoV-2","TGTTCGCGCTTTGATA",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V52L I88T S139N",3
"lib2","SARS-CoV-2","TGTTCGGGATCGGTTT",2,53.05,9.46,-1.38,0.1,1.79,1.15,0,">1 nonsynonymous","V77K A190S",2
"lib2","SARS-CoV-2","TGTTCTAGCCCTTTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* L38P G51S K132S A190C",5
"lib2","SARS-CoV-2","TGTTCTATAGGCGACG",1,2.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61A A89P D97L K114M R179L",5
"lib2","SARS-CoV-2","TGTTCTATATTTCCAG",3,5.61,9.82,-1.01,0.15,2.79,1,0.01,">1 nonsynonymous","Q84S D97E I142A",3
"lib2","SARS-CoV-2","TGTTCTCAACAAAAAG",2,19.53,10.31,-0.52,0.06,2.91,1.04,0,">1 nonsynonymous","Y121A S147N",2
"lib2","SARS-CoV-2","TGTTCTCACCATCTAG",16,386.22,10.25,-0.58,0.02,2.88,1.07,0,">1 nonsynonymous","Y66S P149Q",2
"lib2","SARS-CoV-2","TGTTCTCCACCCGGCA",4,8.68,6.97,-3.86,0.32,2.11,1.07,0.02,"1 nonsynonymous","P161L",1
"lib2","SARS-CoV-2","TGTTCTCCCAAACACA",14,92.25,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S29F G117E S147A P161Y T193Y V194G",6
"lib2","SARS-CoV-2","TGTTCTGCTTCAGCGA",5,67.22,9.46,-1.37,0.1,1.99,1.08,0,">1 nonsynonymous","L5D S45V T85L",3
"lib2","SARS-CoV-2","TGTTCTGTATGCACGG",6,62.16,6,-4.84,2,3,1.19,0,">1 nonsynonymous","P96S Y121A F167L",3
"lib2","SARS-CoV-2","TGTTCTTAACTCTTAA",6,37.2,10.96,0.12,0.05,2.95,1.05,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","TGTTCTTGTCAATAAA",7,142.02,10.75,-0.09,0.04,2.93,1.07,0,">1 nonsynonymous","A42N T55F",2
"lib2","SARS-CoV-2","TGTTCTTTAATTCATC",3,6.63,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F44M V65W P82L A89G G116H F126A",6
"lib2","SARS-CoV-2","TGTTGAAACCGTCGAT",1,4.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61H Y93G",2
"lib2","SARS-CoV-2","TGTTGAAATACGTTCA",1,30.64,10.89,0.05,0.07,2.84,1.17,0,"1 nonsynonymous","V37W",1
"lib2","SARS-CoV-2","TGTTGAACGAGGATCA",4,241.61,9.59,-1.24,0.06,2.21,1.05,0,">1 nonsynonymous","C61D A105V V173W",3
"lib2","SARS-CoV-2","TGTTGAAGGCCAGCAT",15,125.1,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","W106E R127L P149R L188N",4
"lib2","SARS-CoV-2","TGTTGAATGTTTCTTC",1,0,NA,NA,NA,NA,NA,NA,"stop","L60H Y93*",2
"lib2","SARS-CoV-2","TGTTGAATTCATAACG",1,48.08,10.13,-0.71,0.08,2.35,1.02,0,">1 nonsynonymous","S41L K56N K114E Y123L",4
"lib2","SARS-CoV-2","TGTTGAATTTTTAAAT",5,11.32,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","C6L D68A Y121P N171L",4
"lib2","SARS-CoV-2","TGTTGACAACAGACGG",2,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R78C T85A T148F",3
"lib2","SARS-CoV-2","TGTTGACAAGCCATAT",8,82.49,10.65,-0.19,0.04,2.91,1.1,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","TGTTGACGGCCTTAGT",2,1.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14T F47S V77M",3
"lib2","SARS-CoV-2","TGTTGACTCAAACCGG",5,1.71,NA,NA,NA,NA,NA,NA,"stop","G51I N92* L122Q I138E G152S",5
"lib2","SARS-CoV-2","TGTTGACTGCCATTTT",5,72.38,9.62,-1.21,0.03,2.94,1.05,0,">1 nonsynonymous","Y119N E141T",2
"lib2","SARS-CoV-2","TGTTGAGCTTATCAAT",7,65.92,9.41,-1.43,0.05,2.92,1.1,0,"1 nonsynonymous","G146E",1
"lib2","SARS-CoV-2","TGTTGATAGACCAATA",2,24.06,10.55,-0.29,0.09,2.63,1.38,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TGTTGATCACTAACGA",5,1.96,NA,NA,NA,NA,NA,NA,"stop","Y35D K94S L122* R127L",4
"lib2","SARS-CoV-2","TGTTGATCGCCATTCT",10,172.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G101C Q163A Q176L",3
"lib2","SARS-CoV-2","TGTTGCAACACTTATT",1,0,NA,NA,NA,NA,NA,NA,"stop","G9* P149L E186C",3
"lib2","SARS-CoV-2","TGTTGCAGACTAATGG",3,110.62,10.63,-0.21,0.03,2.95,1.06,0,">1 nonsynonymous","A105S G174S S200V",3
"lib2","SARS-CoV-2","TGTTGCAGGGTTGTAC",2,7.11,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","P7S V37Y E154L Y178H",4
"lib2","SARS-CoV-2","TGTTGCAGTGTGAGCG",12,135.21,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N107T R127H T201C",3
"lib2","SARS-CoV-2","TGTTGCGGTGAGTTGC",6,2.01,NA,NA,NA,NA,NA,NA,"stop","C61R P96*",2
"lib2","SARS-CoV-2","TGTTGCTGATCCTAGC",1,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2T I28W R127N",3
"lib2","SARS-CoV-2","TGTTGCTGCATATAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C102G",1
"lib2","SARS-CoV-2","TGTTGCTGCATCCTAG",3,30.5,10.88,0.04,0.07,2.93,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTTGGAACGCATCGC",7,135.39,6.96,-3.88,0.3,1.5,1.13,0.02,">1 nonsynonymous","W23V V37C",2
"lib2","SARS-CoV-2","TGTTGGACAACAAATG",2,75.14,10.83,0,0.04,2.95,1.07,0,"1 nonsynonymous","T100C",1
"lib2","SARS-CoV-2","TGTTGGCCGCTCAGAG",2,50.04,10.06,-0.77,0.1,2.57,1.03,0,"1 nonsynonymous","D34F",1
"lib2","SARS-CoV-2","TGTTGGCCTAAGCTCA",2,0.04,NA,NA,NA,NA,NA,NA,"stop","R16* K56S D97H",3
"lib2","SARS-CoV-2","TGTTGGCGCCATTCCT",3,0.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23A F99H Y175L",3
"lib2","SARS-CoV-2","TGTTGGGTTGGACCGA",7,0.38,NA,NA,NA,NA,NA,NA,"stop","A14V F70* G86R F99A N120A P149F",6
"lib2","SARS-CoV-2","TGTTGGTCAAGTATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y91* H189T",2
"lib2","SARS-CoV-2","TGTTGTACCCTACACA",8,155.05,10.79,-0.05,0.05,2.95,1.07,0,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","TGTTGTCAAAGCTATC",3,43.02,9.4,-1.43,0.09,1.92,1.04,0,"1 nonsynonymous","Y178K",1
"lib2","SARS-CoV-2","TGTTGTCTACATATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","T100G G117* G155H",3
"lib2","SARS-CoV-2","TGTTGTGACTAGCTGA",1,0.89,NA,NA,NA,NA,NA,NA,"stop","T3S I104*",2
"lib2","SARS-CoV-2","TGTTGTGATATAGACA",2,54.83,6.42,-4.42,0.31,1.5,1.14,0.01,">1 nonsynonymous","D75I Q84D",2
"lib2","SARS-CoV-2","TGTTGTTAGATATAGA",2,35.14,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S113D F167E",2
"lib2","SARS-CoV-2","TGTTTAAAACTTCGGA",6,122.65,10.61,-0.23,0.04,2.88,1.11,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TGTTTAAACTAGAACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37K G86M L95V V103Q",4
"lib2","SARS-CoV-2","TGTTTAAAGGGTTTAA",1,56.92,9.99,-0.84,0.09,2.81,1.08,0,"1 nonsynonymous","Q144L",1
"lib2","SARS-CoV-2","TGTTTAAAGTAATCCC",2,92.82,6,-4.84,1.91,1.5,1.12,0,">1 nonsynonymous","K87N S113L Y175L",3
"lib2","SARS-CoV-2","TGTTTAAATGTTTAAC",2,1.21,NA,NA,NA,NA,NA,NA,"stop","N4* N13V F17S V115A",4
"lib2","SARS-CoV-2","TGTTTAACACCTAGCG",4,58.94,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","A22L Y50C",2
"lib2","SARS-CoV-2","TGTTTAACACGAGAGA",3,5.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93T I104S P149E T201K",4
"lib2","SARS-CoV-2","TGTTTAACGCTTCTTA",9,158.41,7.09,-3.74,0.08,1.61,1.11,0,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","TGTTTAACTACAGGTG",7,80.43,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3Y T55S F167C",3
"lib2","SARS-CoV-2","TGTTTAAGTGAGACCA",2,7.45,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R16Y G74L Y91E Y165L",4
"lib2","SARS-CoV-2","TGTTTACACAGATGAC",10,92.17,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V65E A89N S108N E186N",4
"lib2","SARS-CoV-2","TGTTTACCATTGACCA",8,111.42,9.87,-0.96,0.08,2.01,1.03,0,">1 nonsynonymous","A105S G116L Y123L S139T",4
"lib2","SARS-CoV-2","TGTTTACGAATTATCA",3,7.37,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","V65K V71W Q84F F99W L125G K132M",6
"lib2","SARS-CoV-2","TGTTTACTTAGCTTAC",19,8.03,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib2","SARS-CoV-2","TGTTTAGAAGGTTTCG",3,38.71,10.91,0.07,0.14,2.83,1.1,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGTTTAGCACCAGGGT",17,230.12,10.31,-0.52,0.03,2.9,1.04,0,">1 nonsynonymous","T15S F44V G83F",3
"lib2","SARS-CoV-2","TGTTTAGGACGGCTAG",5,111.99,8.34,-2.5,0.1,2.65,1.07,0,">1 nonsynonymous","G166D T170S",2
"lib2","SARS-CoV-2","TGTTTAGTGAATTAAA",3,40.54,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I88S L122S A145R P149L",4
"lib2","SARS-CoV-2","TGTTTAGTGCGACAAA",5,18.1,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","V103F Y123T F160L Y175C S200W",5
"lib2","SARS-CoV-2","TGTTTATAAAGGTGAT",3,9.99,8.84,-2,0.17,2.88,1,0.01,">1 nonsynonymous","P7K I142G",2
"lib2","SARS-CoV-2","TGTTTATCCCTATAAA",6,1.18,NA,NA,NA,NA,NA,NA,"stop","I2P N120*",2
"lib2","SARS-CoV-2","TGTTTATCTCAGGTAA",8,88.6,10.61,-0.23,0.1,2.8,1.04,0,">1 nonsynonymous","R16S G83R L95V G152N",4
"lib2","SARS-CoV-2","TGTTTATCTGGAGACC",5,22.29,6,-4.84,1.93,1.5,1.14,0.04,">1 nonsynonymous","R27W D98K C150Q",3
"lib2","SARS-CoV-2","TGTTTATCTGTAGTAT",2,32.31,10.65,-0.18,0.04,2.93,1.09,0,">1 nonsynonymous","T85G T201V",2
"lib2","SARS-CoV-2","TGTTTATGAAACAAAT",9,114.41,6,-4.84,1.4,1.5,1.14,0.01,">1 nonsynonymous","L38A L131P",2
"lib2","SARS-CoV-2","TGTTTATGACTAATAA",2,51.71,10.92,0.09,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTTATTAAATAGAT",3,59.88,7.81,-3.02,0.3,1.5,1.02,0.03,">1 nonsynonymous","Y121A G155P K198M",3
"lib2","SARS-CoV-2","TGTTTATTAGAAGTCT",1,0.12,NA,NA,NA,NA,NA,NA,"stop","E10D S41N D59* Y93E P133S",5
"lib2","SARS-CoV-2","TGTTTCAAAAATAAAT",2,9.54,9.7,-1.14,0.06,2.94,1,0,">1 nonsynonymous","C6D F156L",2
"lib2","SARS-CoV-2","TGTTTCAAAAGTCGTA",2,37.19,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N30A L57Q G83I",3
"lib2","SARS-CoV-2","TGTTTCAACCTAATAT",15,266.64,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","N30A Y39S K56M G86N Y91R P96D N120Q K128Q T201S",9
"lib2","SARS-CoV-2","TGTTTCAACTTATAGT",11,85.77,6.82,-4.02,0.26,1.5,1.12,0.01,">1 nonsynonymous","C6M Y143T",2
"lib2","SARS-CoV-2","TGTTTCACAACTAGCT",9,49.41,8.26,-2.58,0.21,1.5,1.09,0.02,">1 nonsynonymous","F47I T55V L183C A190T",4
"lib2","SARS-CoV-2","TGTTTCACAATCCCCT",4,18.36,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","S19V D59E Q84N V153S",4
"lib2","SARS-CoV-2","TGTTTCATTACTAGCC",8,3.39,NA,NA,NA,NA,NA,NA,"stop","A18K L95* V173S S184R",4
"lib2","SARS-CoV-2","TGTTTCCAAATCACTG",3,75.99,9.72,-1.11,0.08,2.04,1.07,0,">1 nonsynonymous","N24L S129Y P149R",3
"lib2","SARS-CoV-2","TGTTTCCGATTGTTCG",4,0.53,NA,NA,NA,NA,NA,NA,"stop","Q144V E154F G166S G172*",4
"lib2","SARS-CoV-2","TGTTTCGACCGAACAA",20,163.73,10.83,-0.01,0.04,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TGTTTCGCCCACCTAC",6,35.11,6,-4.84,1.1,3,1.13,0.01,">1 nonsynonymous","D59R V103E P133A",3
"lib2","SARS-CoV-2","TGTTTCTAATATACAA",4,20.3,8.9,-1.94,0.23,1.64,1.07,0.03,">1 nonsynonymous","F12R R78C",2
"lib2","SARS-CoV-2","TGTTTCTAGGTATAGG",2,38.73,6,-4.84,0.57,3,1.04,0,">1 nonsynonymous","K26S A89I G116A Y178Q",4
"lib2","SARS-CoV-2","TGTTTGAACATAATCG",5,56.31,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R16E N30T N120Y R136T Y143I",5
"lib2","SARS-CoV-2","TGTTTGAACGCCACTT",5,57.7,6,-4.84,1.75,1.5,1.19,0.02,">1 nonsynonymous","V37G D112V G146E",3
"lib2","SARS-CoV-2","TGTTTGAACTTAGATA",4,26.4,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","Y93Q A105Q",2
"lib2","SARS-CoV-2","TGTTTGAAGTAAAAAA",2,12.13,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","G9S P149K R179G",3
"lib2","SARS-CoV-2","TGTTTGATACCGGCAA",11,126.61,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C31D T55N D90C F99S G155Q",5
"lib2","SARS-CoV-2","TGTTTGATATTACTTT",2,63.79,9.86,-0.97,0.14,2.09,1.03,0.01,">1 nonsynonymous","T15C A33P K132T",3
"lib2","SARS-CoV-2","TGTTTGCAAAGGAGAT",2,63.02,10.82,-0.02,0.07,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TGTTTGCCATGCGCTA",3,8.97,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","P54A A81C G101V S139E A190F P197Q",6
"lib2","SARS-CoV-2","TGTTTGCCCATTAACC",1,28.66,9.96,-0.88,0.1,2.63,1.09,0.01,">1 nonsynonymous","T15C P149G",2
"lib2","SARS-CoV-2","TGTTTGCGACGAATAT",2,29.61,8.26,-2.57,0.35,1.5,1,0.06,">1 nonsynonymous","L5P C49G T55L",3
"lib2","SARS-CoV-2","TGTTTGGAGGACGGGA",2,28.49,8.06,-2.78,0.22,2.15,1.08,0.03,">1 nonsynonymous","S41Y C158Q",2
"lib2","SARS-CoV-2","TGTTTGTATCCTTGGG",3,15.35,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N157T L162V E186I",3
"lib2","SARS-CoV-2","TGTTTTAAACATGACA",3,69.79,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F126I G172C",2
"lib2","SARS-CoV-2","TGTTTTAACAAGTAAC",14,89.75,8.59,-2.24,0.38,1.5,1,0.06,">1 nonsynonymous","G51R A89V E135V",3
"lib2","SARS-CoV-2","TGTTTTAGTAGTCAGC",6,76.45,10.84,0.01,0.04,2.97,1.04,0,">1 nonsynonymous","C61R Q144E",2
"lib2","SARS-CoV-2","TGTTTTGTTACAAACA",7,187.2,10.91,0.08,0.05,2.93,1.08,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","TGTTTTGTTAGTCCCT",2,12.54,10.82,-0.01,0.1,2.88,1.16,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TGTTTTTCTTTACGTA",3,55.15,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N1V S69W D112S F160I",4
"lib2","SARS-CoV-2","TGTTTTTTAAAGCCAG",1,2.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56G A89R P96L S113G",4
"lib2","SARS-CoV-2","TTAAAAAAAACTGTGA",1,53.9,10.83,-0.01,0.04,2.87,1.14,0,"1 nonsynonymous","T85A",1
"lib2","SARS-CoV-2","TTAAAAAAACGTATTC",5,19.54,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","P7T F44Y Y93R Y119S F160N",5
"lib2","SARS-CoV-2","TTAAAAAAAGTCTTGT",15,80.55,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4C F62S K114T P133T I142W G152A T201H",7
"lib2","SARS-CoV-2","TTAAAAAAATGCTTGG",6,0.77,NA,NA,NA,NA,NA,NA,"stop","G9M N107C V153L P161*",4
"lib2","SARS-CoV-2","TTAAAAAAATGTTCAC",1,13.32,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","V11S Y50L V103Q P149W T170H",5
"lib2","SARS-CoV-2","TTAAAAAAATGTTCAT",13,135.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","D34G W106L E154K G166R",4
"lib2","SARS-CoV-2","TTAAAAAAATTTAAAA",4,0.02,NA,NA,NA,NA,NA,NA,"stop","T63L D90F R136* N157A Q168Y",5
"lib2","SARS-CoV-2","TTAAAAAACATAAAAA",3,14.88,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14I S43K G86K P96G",4
"lib2","SARS-CoV-2","TTAAAAAACGAAAACA",3,10.03,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T63S F99E S139R G152T",4
"lib2","SARS-CoV-2","TTAAAAAAGAATCCCC",4,101.32,9.5,-1.33,0.07,2.05,1.02,0,">1 nonsynonymous","N107R Y123S",2
"lib2","SARS-CoV-2","TTAAAAAATAATGAGT",3,76.44,10.27,-0.57,0.04,2.82,1.01,0,">1 nonsynonymous","E10L I88V",2
"lib2","SARS-CoV-2","TTAAAAAATCCAGGAA",6,49.06,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","I88K Y123K T140K",3
"lib2","SARS-CoV-2","TTAAAAACAAACTAGA",6,3.51,NA,NA,NA,NA,NA,NA,"stop","S43C D112*",2
"lib2","SARS-CoV-2","TTAAAAACAAAGCAAG",1,81.47,10.33,-0.5,0.04,2.96,1.03,0,">1 nonsynonymous","F44I A89P L187T",3
"lib2","SARS-CoV-2","TTAAAAACAACGTACT",6,4358.39,8.07,-2.77,0.06,1.51,1.05,0,">1 nonsynonymous","Y121N G155L",2
"lib2","SARS-CoV-2","TTAAAAACAATCGGTG",2,35.22,6,-4.84,1.67,1.5,1.14,0.01,">1 nonsynonymous","V11L Y21N V65H W106C",4
"lib2","SARS-CoV-2","TTAAAAACAGCTCAGC",7,0.39,NA,NA,NA,NA,NA,NA,"stop","T15S G74M A89S K114Y G146V V153*",6
"lib2","SARS-CoV-2","TTAAAAACCGAACACC",2,27.65,8.21,-2.63,0.33,1.5,1.05,0.04,">1 nonsynonymous","D97K T100S N107H",3
"lib2","SARS-CoV-2","TTAAAAACCGATGTAA",1,38.2,6,-4.84,2,3,1.13,0,">1 nonsynonymous","Q144C Y175I",2
"lib2","SARS-CoV-2","TTAAAAACCTATAAGC",6,6.73,NA,NA,NA,NA,NA,NA,"stop","T63M Q84* Y91P",3
"lib2","SARS-CoV-2","TTAAAAACTCCTAGCA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10K Y50* N107T Q144M T170F",5
"lib2","SARS-CoV-2","TTAAAAACTGCTACGT",3,25.46,7.89,-2.95,0.39,1.5,1,0.04,">1 nonsynonymous","F8Q N13G Y21A",3
"lib2","SARS-CoV-2","TTAAAAAGAACTGTTA",10,157.63,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","Y35M S53G R73E T85L Y121N V180G",6
"lib2","SARS-CoV-2","TTAAAAAGACCGCTCC",6,242.99,9.32,-1.52,0.03,2.91,1.1,0,">1 nonsynonymous","Y119S I138L P149L",3
"lib2","SARS-CoV-2","TTAAAAAGAGAACAAA",3,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M P7H V11C N40I N110M K128S V173F",7
"lib2","SARS-CoV-2","TTAAAAAGATATAAAC",6,29.74,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L95P N109F N120V Q144P L183W",5
"lib2","SARS-CoV-2","TTAAAAAGCCATACGG",6,137.06,10.09,-0.74,0.08,2.45,1,0,">1 nonsynonymous","R16Q L60C Y66F D98F T201N",5
"lib2","SARS-CoV-2","TTAAAAAGCCGTTTTG",16,127.38,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D34A K114Q T140Y N157L",4
"lib2","SARS-CoV-2","TTAAAAAGGACTCAGC",1,24.34,6.24,-4.59,1.09,1.5,1.08,0.04,">1 nonsynonymous","T46M T100I S129M Q144E V153R P177T T201L",7
"lib2","SARS-CoV-2","TTAAAAAGGCGCAGAA",1,36.06,10.67,-0.17,0.02,2.94,1.06,0,">1 nonsynonymous","K56C V115L",2
"lib2","SARS-CoV-2","TTAAAAAGTCTATAGA",1,21.97,10.85,0.02,0.07,2.86,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAAAAATAACCAGAC",1,0.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S41T",1
"lib2","SARS-CoV-2","TTAAAAATACCACTCA",2,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1V L57W N64R P149Q P161V",5
"lib2","SARS-CoV-2","TTAAAAATACGACGGA",6,39.09,6,-4.84,1.34,1.5,1.19,0.01,">1 nonsynonymous","S41P L95Q",2
"lib2","SARS-CoV-2","TTAAAAATATCCCAGT",7,55.64,9.38,-1.45,0.12,1.68,1.08,0.01,"1 nonsynonymous","P82M",1
"lib2","SARS-CoV-2","TTAAAAATATCTTGTC",12,88.58,7.17,-3.66,0.15,1.5,1.11,0.01,">1 nonsynonymous","R16I C150R",2
"lib2","SARS-CoV-2","TTAAAAATTACCTCTT",2,37.45,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G86V K128V",2
"lib2","SARS-CoV-2","TTAAAAATTATTTAAT",8,116.87,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37G A89G R127Q",3
"lib2","SARS-CoV-2","TTAAAAATTCGCCAGG",3,15.92,10.19,-0.65,0.07,3,1.03,0,">1 nonsynonymous","A42K P169M",2
"lib2","SARS-CoV-2","TTAAAAATTTGAAACT",2,16.04,9.86,-0.98,0.11,2.62,1.08,0.01,">1 nonsynonymous","P7F C61N G152T",3
"lib2","SARS-CoV-2","TTAAAACAAAAGCTAG",3,123.25,9.51,-1.33,0.04,2.95,1.06,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","TTAAAACAAAAGGCGT",6,28.38,9.54,-1.29,0.12,1.96,1,0.01,">1 nonsynonymous","K48G S53R",2
"lib2","SARS-CoV-2","TTAAAACAACTGGATC",7,54.63,6,-4.84,2,3,1.16,0,">1 nonsynonymous","D97F W106T R127M S139F G174W L188G",6
"lib2","SARS-CoV-2","TTAAAACAAGTCGTAG",20,310.93,10.15,-0.69,0.05,2.59,1.08,0,">1 nonsynonymous","V37L K94S",2
"lib2","SARS-CoV-2","TTAAAACAAGTGGTAA",1,6.46,6.29,-4.55,2,3,1.27,0.02,"1 nonsynonymous","Y159T",1
"lib2","SARS-CoV-2","TTAAAACACATGTGCT",7,56.51,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","F17N W106S F160I",3
"lib2","SARS-CoV-2","TTAAAACACATTGTAT",12,117.17,6,-4.84,1.58,1.5,1.14,0,">1 nonsynonymous","V37S F70T D112V",3
"lib2","SARS-CoV-2","TTAAAACACTACTCAG",2,45.46,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4F W106T K128G G174V",4
"lib2","SARS-CoV-2","TTAAAACACTGGTGAA",8,68.7,9.83,-1.01,0.09,2.09,1.03,0,">1 nonsynonymous","P96S A105G",2
"lib2","SARS-CoV-2","TTAAAACATACTTTCC",6,10.32,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A33K G101A F156W",3
"lib2","SARS-CoV-2","TTAAAACATGCCTTAA",6,3.78,NA,NA,NA,NA,NA,NA,"stop","A18T N58K D137P N151G G172*",5
"lib2","SARS-CoV-2","TTAAAACATTACATCA",3,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174L",1
"lib2","SARS-CoV-2","TTAAAACCAAATAAAA",6,142.5,10.78,-0.05,0.04,2.91,1.1,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","TTAAAACCAACCAGAA",11,102.14,6,-4.84,0.82,1.5,1.17,0,">1 nonsynonymous","D112R S139N I142T",3
"lib2","SARS-CoV-2","TTAAAACCAATAGGCT",1,13.73,8.29,-2.55,0.36,1.5,1.05,0.04,">1 nonsynonymous","V20L D98V",2
"lib2","SARS-CoV-2","TTAAAACCAGAAGATT",15,259.67,10.69,-0.15,0.04,2.92,1.09,0,">1 nonsynonymous","G83C F160H V173F",3
"lib2","SARS-CoV-2","TTAAAACCCAAAGTGA",1,5.26,10.17,-0.67,0.15,2.7,1.29,0.01,">1 nonsynonymous","Q84S E141W",2
"lib2","SARS-CoV-2","TTAAAACCCCGGGAAA",7,5.2,NA,NA,NA,NA,NA,NA,"stop","I2* C102L Y143E G146R",4
"lib2","SARS-CoV-2","TTAAAACCGAACCTCT",1,38,11.07,0.24,0.03,3,1.01,0,">1 nonsynonymous","L5P A105T N171F",3
"lib2","SARS-CoV-2","TTAAAACCGGAGGAAG",2,7.08,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19V S45F",2
"lib2","SARS-CoV-2","TTAAAACCGTAAAATT",1,17.8,8.91,-1.93,0.15,2.51,1.01,0.01,">1 nonsynonymous","D98G I142S",2
"lib2","SARS-CoV-2","TTAAAACCTAGCCGTC",16,266.32,10.83,0,0.05,2.85,1.06,0,"1 nonsynonymous","S36A",1
"lib2","SARS-CoV-2","TTAAAACGCACTGTAA",1,14.94,8.77,-2.07,0.23,2.49,1.04,0.01,">1 nonsynonymous","T3A S41M T46W T55V Y143V",5
"lib2","SARS-CoV-2","TTAAAACGCTAAGTCT",3,50.51,9.69,-1.14,0.06,2.44,1.03,0,">1 nonsynonymous","Y121S P149N",2
"lib2","SARS-CoV-2","TTAAAACGGTATACAA",9,109.26,9.81,-1.02,0.07,2.29,1.01,0,">1 nonsynonymous","L38D S184T",2
"lib2","SARS-CoV-2","TTAAAACGTTAACCAG",1,24.9,8.12,-2.71,0.12,2.39,1.06,0.01,">1 nonsynonymous","T55Y K87W N157T T201E",4
"lib2","SARS-CoV-2","TTAAAACTAGAATCAT",5,22.54,9.97,-0.86,0.11,2.31,1.02,0.01,"1 nonsynonymous","L95T",1
"lib2","SARS-CoV-2","TTAAAACTCATCATCG",8,147.34,10.22,-0.61,0.03,2.93,1.05,0,">1 nonsynonymous","T15P G174P",2
"lib2","SARS-CoV-2","TTAAAACTTACACCCC",1,12.02,8.56,-2.28,0.39,1.5,1.03,0.05,">1 nonsynonymous","N4T A14M E76G T201N",4
"lib2","SARS-CoV-2","TTAAAACTTAGATTCG",1,15.16,8.73,-2.1,0.23,1.5,1.3,0.02,">1 nonsynonymous","L38S S184K",2
"lib2","SARS-CoV-2","TTAAAACTTGATATTC",7,65.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V65Y K87E E154F S164V F185I",5
"lib2","SARS-CoV-2","TTAAAAGACGAAAGAC",6,46.51,10.03,-0.81,0.07,2.83,1.02,0,">1 nonsynonymous","D59L N120W",2
"lib2","SARS-CoV-2","TTAAAAGACGGGGTTG",1,8.08,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14L G86K D97W V103N R127V",5
"lib2","SARS-CoV-2","TTAAAAGACTTACCTT",6,0.22,NA,NA,NA,NA,NA,NA,"stop","F44I K87A Y91* P133Y E141G F167G",6
"lib2","SARS-CoV-2","TTAAAAGAGGAGTAAG",1,13.68,6.23,-4.61,0.69,3,1.18,0.01,">1 nonsynonymous","W23S F70Y Y121Q",3
"lib2","SARS-CoV-2","TTAAAAGATCTGTCTA",5,1.14,NA,NA,NA,NA,NA,NA,"stop","K87* F160N",2
"lib2","SARS-CoV-2","TTAAAAGATTAATCCA",11,66.71,6,-4.84,1.99,1.5,1.18,0.01,">1 nonsynonymous","N4V S41R G101V K128H",4
"lib2","SARS-CoV-2","TTAAAAGCATGATGAA",2,298.13,6,-4.84,1.73,1.5,1.08,0,">1 nonsynonymous","K94D R136E Y143L",3
"lib2","SARS-CoV-2","TTAAAAGCCCAGTTTA",2,4.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93W Y121P",2
"lib2","SARS-CoV-2","TTAAAAGCTCAAAGAT",22,0.33,NA,NA,NA,NA,NA,NA,"stop","C31E N40G L60A R78D L125S C150G V182*",7
"lib2","SARS-CoV-2","TTAAAAGGAACAGTCT",5,29.66,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","R73V N92W F160Q",3
"lib2","SARS-CoV-2","TTAAAAGGAAGAAAAA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6M F12W Y119T S129R A190G",5
"lib2","SARS-CoV-2","TTAAAAGGAGGAGAAT",4,57.43,9.58,-1.26,0.07,2.84,1.01,0,">1 nonsynonymous","Q144C A190T",2
"lib2","SARS-CoV-2","TTAAAAGGGCTATTGC",9,134.15,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","G86Y Y91T Q176W",3
"lib2","SARS-CoV-2","TTAAAAGTCAAGGATA",5,72.42,10.15,-0.68,0.06,2.8,1,0,">1 nonsynonymous","D34S D90S",2
"lib2","SARS-CoV-2","TTAAAAGTGCACCATT",7,62.84,9.18,-1.66,0.11,1.61,1.14,0.01,">1 nonsynonymous","T46R K48Q P96E",3
"lib2","SARS-CoV-2","TTAAAAGTTCAGAAAG",4,61.18,9,-1.84,0.13,2.12,1.09,0.01,">1 nonsynonymous","S45P C61L K87N D98R",4
"lib2","SARS-CoV-2","TTAAAATACAAAAAAC",5,0.33,NA,NA,NA,NA,NA,NA,"stop","N120* T140G E154T Q176P",4
"lib2","SARS-CoV-2","TTAAAATAGTGTCGAC",2,52.56,10.79,-0.05,0.03,2.94,1.09,0,"1 nonsynonymous","K56M",1
"lib2","SARS-CoV-2","TTAAAATATATGACAC",5,36.86,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35S A67P A105Q P149V F156R",5
"lib2","SARS-CoV-2","TTAAAATATGACTTAG",6,102.84,8.84,-2,0.09,2.31,1.07,0,">1 nonsynonymous","T46S V115G P149G G155T",4
"lib2","SARS-CoV-2","TTAAAATCACGGTAGT",5,164.27,10.45,-0.39,0.04,2.9,1.05,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","TTAAAATCATACCCAC",3,26.95,9.3,-1.54,0.12,1.97,1.04,0.01,"1 nonsynonymous","W106E",1
"lib2","SARS-CoV-2","TTAAAATCGTAAATCG",1,5.86,10.54,-0.29,0.19,2.64,1.22,0.01,">1 nonsynonymous","T55Q T140R S147I N171S",4
"lib2","SARS-CoV-2","TTAAAATCTTTACCCG",9,4.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17M Y50S",2
"lib2","SARS-CoV-2","TTAAAATGAAAATATC",16,107.54,10.76,-0.07,0.05,2.96,1.08,0,">1 nonsynonymous","N4Q T100H",2
"lib2","SARS-CoV-2","TTAAAATGCGATGCAG",7,17.76,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C49S T63P D112K L162Y V182G",5
"lib2","SARS-CoV-2","TTAAAATGCGCATCTT",8,15.35,6,-4.84,1.55,3,1.12,0.02,">1 nonsynonymous","N4L S41G S53H K87S W106R S129T E141A C158R",8
"lib2","SARS-CoV-2","TTAAAATGCTACGCTA",2,23.14,8.52,-2.32,0.38,1.5,1.03,0.05,">1 nonsynonymous","G86T P149Q",2
"lib2","SARS-CoV-2","TTAAAATGGAGCGCAA",5,44.31,9.63,-1.21,0.04,2.97,1.04,0,"1 nonsynonymous","P169E",1
"lib2","SARS-CoV-2","TTAAAATGGCGCACAC",1,20,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","F12A T55E G86T V153Y G174A",5
"lib2","SARS-CoV-2","TTAAAATGGGCAAATT",11,195.45,10.72,-0.12,0.03,2.89,1.11,0,">1 nonsynonymous","E10Q S41N C61V",3
"lib2","SARS-CoV-2","TTAAAATGTCTTTAAG",4,67.43,9.64,-1.2,0.11,2.49,1.06,0.01,">1 nonsynonymous","A18V Y39K I138N T148A",4
"lib2","SARS-CoV-2","TTAAAATGTTGTTTAC",5,20.99,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","F99N C102S",2
"lib2","SARS-CoV-2","TTAAAATTAGAGCAGT",9,77.18,10.27,-0.57,0.03,2.93,1.07,0,"1 nonsynonymous","C6T",1
"lib2","SARS-CoV-2","TTAAAATTGAGGAAAA",7,168.78,10.15,-0.68,0.05,2.73,1.03,0,">1 nonsynonymous","G51C L60Y",2
"lib2","SARS-CoV-2","TTAAAATTGCACGAAG",4,66.29,10.61,-0.22,0.05,2.89,1.1,0,">1 nonsynonymous","S45A P149T",2
"lib2","SARS-CoV-2","TTAAAATTTAGTAACG",1,12.99,10.72,-0.12,0.1,2.87,1.12,0,"1 nonsynonymous","E10P",1
"lib2","SARS-CoV-2","TTAAACAAAAAATGTT",7,34.94,10.12,-0.72,0.06,2.89,1.1,0,"1 nonsynonymous","F156S",1
"lib2","SARS-CoV-2","TTAAACAAAATTTCCG",2,47.7,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T55H I88C K94D",3
"lib2","SARS-CoV-2","TTAAACAAAGACTACT",9,9,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","Y35M G51E Y121I P149S V182N",5
"lib2","SARS-CoV-2","TTAAACAACAAACAAC",5,0.8,NA,NA,NA,NA,NA,NA,"stop","Y93H S129* V173I",3
"lib2","SARS-CoV-2","TTAAACAACTTACATT",1,2.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32L L38R G86L P149T T201D",5
"lib2","SARS-CoV-2","TTAAACAACTTATTCC",4,47.37,10.8,-0.03,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACAAGAATACTT",6,51.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86L Y93S",2
"lib2","SARS-CoV-2","TTAAACAAGACACTAC",2,30.49,6.01,-4.83,0.42,3,1.13,0,">1 nonsynonymous","A42T K56V I104E N120K",4
"lib2","SARS-CoV-2","TTAAACAAGCGGGTTT",5,18.14,6,-4.84,1.2,1.5,1.18,0.03,">1 nonsynonymous","F17S C61W A81Y C195S",4
"lib2","SARS-CoV-2","TTAAACAATCATATAT",6,2.01,NA,NA,NA,NA,NA,NA,"stop","Y119*",1
"lib2","SARS-CoV-2","TTAAACAATTGCATTG",1,5.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27E S41I F62L Y165S",4
"lib2","SARS-CoV-2","TTAAACAATTGCTCTA",4,10.92,6.04,-4.8,0.67,1.5,1.07,0.02,">1 nonsynonymous","C61R D68I K198R",3
"lib2","SARS-CoV-2","TTAAACACACTGTATA",5,67.02,10.63,-0.2,0.06,2.88,1.08,0,"1 nonsynonymous","Y91L",1
"lib2","SARS-CoV-2","TTAAACACATGACATA",2,66.84,10.68,-0.16,0.05,2.97,1.02,0,">1 nonsynonymous","K48I K128S",2
"lib2","SARS-CoV-2","TTAAACACCCTGATTT",3,5.75,NA,NA,NA,NA,NA,NA,"stop","W106S K114R R136* Q144C Y178L",5
"lib2","SARS-CoV-2","TTAAACACGGCAGAAT",1,70.25,10.71,-0.13,0.07,2.85,1.18,0,">1 nonsynonymous","S36L N64S",2
"lib2","SARS-CoV-2","TTAAACACTGGCCTTG",4,55.76,7.73,-3.11,0.15,1.5,1.1,0.01,">1 nonsynonymous","N130E Y165R",2
"lib2","SARS-CoV-2","TTAAACAGAAACCGCC",4,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Q R25P A81I P96S",4
"lib2","SARS-CoV-2","TTAAACAGGGTTATAG",6,122.37,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N120V C150S",2
"lib2","SARS-CoV-2","TTAAACAGTCCAACGT",3,25.08,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N92T A105F Q144P L162S",4
"lib2","SARS-CoV-2","TTAAACAGTGCCACAC",4,126.92,10.13,-0.71,0.03,2.99,1,0,"1 nonsynonymous","Y143M",1
"lib2","SARS-CoV-2","TTAAACAGTGTGATCA",14,4.1,NA,NA,NA,NA,NA,NA,"stop","S19K N58*",2
"lib2","SARS-CoV-2","TTAAACAGTTACATCA",5,122.47,10.81,-0.02,0.05,2.86,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACATAACACTGC",3,60.14,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","T55L G172Y Q176M",3
"lib2","SARS-CoV-2","TTAAACATCAAGTTAA",4,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49K D68P G117K N171S T201M",5
"lib2","SARS-CoV-2","TTAAACATCCTTAAAT",2,21.88,10.86,0.02,0.1,2.88,1.11,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TTAAACATCTACGTGG",1,14.31,9.58,-1.26,0.12,1.96,1.09,0.01,">1 nonsynonymous","T55Y T148D F185S",3
"lib2","SARS-CoV-2","TTAAACATGTCTGGTC",3,0,NA,NA,NA,NA,NA,NA,"stop","P7R Y39L Y50* T85S D90R D112M Q144S",7
"lib2","SARS-CoV-2","TTAAACATGTGTCGAC",8,93.47,10.9,0.07,0.04,2.9,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACATGTTGTTAG",6,376.6,10.84,0.01,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACATTGACCGCA",1,3.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32R A89E W106F L162K",4
"lib2","SARS-CoV-2","TTAAACCAAAAATCCG",3,0.47,NA,NA,NA,NA,NA,NA,"stop","F12W L95M D112* E141L N151D",5
"lib2","SARS-CoV-2","TTAAACCAACCGTTCG",6,166.66,10.79,-0.05,0.04,2.94,1.09,0,"1 nonsynonymous","N64D",1
"lib2","SARS-CoV-2","TTAAACCAATCGCACA",2,25.16,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","R27F A67D G146T",3
"lib2","SARS-CoV-2","TTAAACCATCTTTTCG",4,123.34,9.1,-1.73,0.05,2.91,1.08,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","TTAAACCATTGAATTC",2,16.39,10.46,-0.38,0.08,2.97,1,0,">1 nonsynonymous","S36G P149N V153W",3
"lib2","SARS-CoV-2","TTAAACCCAAATACAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11S T55N",2
"lib2","SARS-CoV-2","TTAAACCCACAACTAA",1,0.58,NA,NA,NA,NA,NA,NA,"stop","Y91C S129* N171C",3
"lib2","SARS-CoV-2","TTAAACCCACGACCAG",1,17.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23M F44N F62A P82D K114N L122S",6
"lib2","SARS-CoV-2","TTAAACCCAGCTACAC",5,118.96,10.44,-0.39,0.04,2.89,1.09,0,"1 nonsynonymous","A105G",1
"lib2","SARS-CoV-2","TTAAACCCGAACCCAA",10,51.41,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N1Y S69F G74S A81R Y165E",5
"lib2","SARS-CoV-2","TTAAACCCGTACCTTT",3,80.82,8.69,-2.15,0.07,2.58,1.07,0,">1 nonsynonymous","N13S G117A",2
"lib2","SARS-CoV-2","TTAAACCCTAAGTCTA",3,20.13,6.41,-4.43,0.59,1.5,1.13,0.03,">1 nonsynonymous","A22T V37C K56M I88Q",4
"lib2","SARS-CoV-2","TTAAACCGAAACGACA",2,12.41,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","N1C V11R N107K R127S P133Q P149C S164R T201R",8
"lib2","SARS-CoV-2","TTAAACCTAAAGCGAA",1,29,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","Y35I C61S A67C Y123D R127G I138V Q168M",7
"lib2","SARS-CoV-2","TTAAACCTAGACGATT",2,1.02,NA,NA,NA,NA,NA,NA,"stop","V71K G101T V180*",3
"lib2","SARS-CoV-2","TTAAACCTGACAAGGA",7,198.59,10.72,-0.11,0.06,2.8,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACCTGATGCGCG",2,8.85,10.77,-0.07,0.08,2.99,1.06,0,">1 nonsynonymous","A33Q T55A T201R",3
"lib2","SARS-CoV-2","TTAAACCTTATATACC",2,6.67,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D34N S139N Y165T",3
"lib2","SARS-CoV-2","TTAAACGAATAAAAGA",3,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51K I138E S184F",3
"lib2","SARS-CoV-2","TTAAACGCAACGGTAC",4,114.38,10.83,-0.01,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACGCCATAAAGA",1,0.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1F A14I L57D G117Y P149H F167M",6
"lib2","SARS-CoV-2","TTAAACGGTATAGACT",3,0.46,NA,NA,NA,NA,NA,NA,"stop","A14* A22T C49T P96Y",4
"lib2","SARS-CoV-2","TTAAACGTAAAAATAC",5,3.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27K Y35N S69V N110L S139L V173P",6
"lib2","SARS-CoV-2","TTAAACGTAATACGAC",2,6.41,8.4,-2.44,0.19,1.73,1.05,0.01,">1 nonsynonymous","N107V G116R",2
"lib2","SARS-CoV-2","TTAAACGTACGCCAAG",2,0,NA,NA,NA,NA,NA,NA,"stop","G9S T201*",2
"lib2","SARS-CoV-2","TTAAACGTCAGTTGTC",1,4.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","TTAAACGTTTAAAAAA",11,207.16,10.86,0.02,0.05,2.9,1.09,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TTAAACTAAGCCTCGA",4,46.88,10.83,-0.01,0.09,2.79,1.09,0,"1 nonsynonymous","P191T",1
"lib2","SARS-CoV-2","TTAAACTAATTTGGTT",5,96.67,10.37,-0.46,0.05,2.81,1.07,0,">1 nonsynonymous","T140F L162V",2
"lib2","SARS-CoV-2","TTAAACTACAAGTAAA",1,29.42,10.61,-0.22,0.06,2.96,1.06,0,"1 nonsynonymous","L95M",1
"lib2","SARS-CoV-2","TTAAACTACATGGAAA",1,90.94,10.84,0.01,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAACTATAGACCCT",14,122.1,6,-4.84,2,3,1.22,0,">1 nonsynonymous","F62Y R78L C102T R124H I138V",5
"lib2","SARS-CoV-2","TTAAACTATATAAAAG",6,119.28,8.08,-2.76,0.12,1.89,1.04,0.01,">1 nonsynonymous","S41E Y165S",2
"lib2","SARS-CoV-2","TTAAACTATCAAGCGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39H T63S Y91D",3
"lib2","SARS-CoV-2","TTAAACTCAATAAGAG",9,135.49,8.99,-1.84,0.1,1.82,1.09,0,">1 nonsynonymous","S36M S43W K48I V173S K199D",5
"lib2","SARS-CoV-2","TTAAACTCCGATGCTT",1,14.16,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G51C S113F N130S",3
"lib2","SARS-CoV-2","TTAAACTCTGAACTTA",1,9.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A14D A105P C195G",3
"lib2","SARS-CoV-2","TTAAACTGAAAAAGCA",8,142.57,10.61,-0.23,0.03,2.94,1.06,0,"1 nonsynonymous","G174S",1
"lib2","SARS-CoV-2","TTAAACTGAAATCCGT",2,26.9,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G9C V37L I88G N157M",4
"lib2","SARS-CoV-2","TTAAACTGTATCACGG",2,31.56,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D34G K56L L125G D137Y N171K",5
"lib2","SARS-CoV-2","TTAAACTGTCAATCCA",3,58.88,10.83,0,0.07,2.93,1.11,0,"1 nonsynonymous","Y35F",1
"lib2","SARS-CoV-2","TTAAACTGTCAGGGGT",10,98.68,6,-4.84,1.52,1.5,1.15,0.01,">1 nonsynonymous","G51P G83N A105L T140L",4
"lib2","SARS-CoV-2","TTAAACTGTTACAACA",3,32,10.72,-0.12,0.06,2.88,1.12,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","TTAAACTTAAACAAAT",5,28.28,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A67D K128S Y165L T201L",4
"lib2","SARS-CoV-2","TTAAACTTATGCCCTT",3,47.73,10.05,-0.79,0.04,2.7,1.05,0,">1 nonsynonymous","D34T N64E",2
"lib2","SARS-CoV-2","TTAAACTTTAACATAG",3,19.11,10.83,-0.01,0.05,3,1.02,0,"1 nonsynonymous","S200T",1
"lib2","SARS-CoV-2","TTAAACTTTGAAAACA",2,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107S K132F V180P",3
"lib2","SARS-CoV-2","TTAAAGAAAAAGTTGT",4,154.31,10.8,-0.03,0.04,2.91,1.08,0,"1 nonsynonymous","N120A",1
"lib2","SARS-CoV-2","TTAAAGAAACCAGCTG",31,309.08,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","K56V I80S A105V E135N I142R",5
"lib2","SARS-CoV-2","TTAAAGAAATGCGGAT",1,30.94,10.71,-0.13,0.05,2.98,1.05,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","TTAAAGAACATTATAC",7,59.07,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6Y F99S N120T Y159G",4
"lib2","SARS-CoV-2","TTAAAGAATACCCGCT",8,60.41,8.4,-2.43,0.18,1.95,1.13,0.01,">1 nonsynonymous","G146K N151L S184F",3
"lib2","SARS-CoV-2","TTAAAGACATACGATA",1,31.13,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","G101V N157V",2
"lib2","SARS-CoV-2","TTAAAGACTAATAACA",5,64.81,10.09,-0.75,0.06,2.72,1.06,0,"1 nonsynonymous","P96K",1
"lib2","SARS-CoV-2","TTAAAGACTCGATCAT",1,69.3,7.27,-3.57,0.32,1.5,1.1,0.03,">1 nonsynonymous","E10W P149T P177S",3
"lib2","SARS-CoV-2","TTAAAGACTTACCAAA",7,72.15,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","T3H L38T L95P G146A",4
"lib2","SARS-CoV-2","TTAAAGAGAAGTCATT",4,27.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73Q K94W T170G",3
"lib2","SARS-CoV-2","TTAAAGAGCCAAGATA",1,23.1,8.57,-2.27,0.12,2.96,1.07,0.01,">1 nonsynonymous","V115G T170V Y178H",3
"lib2","SARS-CoV-2","TTAAAGAGTAACTTAC",5,0,NA,NA,NA,NA,NA,NA,"stop","S19P T63Q Y123A E141K S200*",5
"lib2","SARS-CoV-2","TTAAAGATATAGAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","S139M Y159R Q168I S200*",4
"lib2","SARS-CoV-2","TTAAAGATCCCATCCA",13,131.45,6.45,-4.38,0.29,1.5,1.13,0.01,">1 nonsynonymous","V52N T148L G166F T201L",4
"lib2","SARS-CoV-2","TTAAAGCAAAAGTTAG",4,26.56,8.31,-2.52,0.27,1.5,1.16,0.03,">1 nonsynonymous","S43F A105I Q144P",3
"lib2","SARS-CoV-2","TTAAAGCAAATTTCTA",4,40.35,6.96,-3.87,0.26,1.5,1.11,0.01,">1 nonsynonymous","D59E R124N",2
"lib2","SARS-CoV-2","TTAAAGCACTCTGCAG",1,16.57,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F44S P161I",2
"lib2","SARS-CoV-2","TTAAAGCCACACGGAT",16,118.18,10.79,-0.04,0.04,2.97,1.05,0,"1 nonsynonymous","K132T",1
"lib2","SARS-CoV-2","TTAAAGCCGTATCTTT",3,26.45,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","I88R T148S P161K",3
"lib2","SARS-CoV-2","TTAAAGCGCACCAAGC",2,16.99,10.08,-0.75,0.08,2.95,1.08,0,">1 nonsynonymous","A18E F156A",2
"lib2","SARS-CoV-2","TTAAAGCGGTAGCCCT",1,9.71,10.77,-0.07,0.08,2.97,1.03,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TTAAAGCTATAAATAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44Q",1
"lib2","SARS-CoV-2","TTAAAGCTCAAACCTC",6,5.27,NA,NA,NA,NA,NA,NA,"stop","N13Y G51R C61*",3
"lib2","SARS-CoV-2","TTAAAGGAACTTTTAG",4,18.22,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","R16L C102N",2
"lib2","SARS-CoV-2","TTAAAGGAAGTAGTTA",6,62.2,9.91,-0.93,0.1,2.21,1.12,0,">1 nonsynonymous","Y35W T100P",2
"lib2","SARS-CoV-2","TTAAAGGAATAAAAAA",5,53.69,10.8,-0.04,0.06,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAAAGGACGATGCTA",5,74.99,8.26,-2.58,0.12,2.24,1.07,0,">1 nonsynonymous","G9Y A89T G174I S200P",4
"lib2","SARS-CoV-2","TTAAAGGAGGTAGAGA",2,43.19,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","V37T Y143G C150S",3
"lib2","SARS-CoV-2","TTAAAGGATAGGTTAA",9,37.69,6.4,-4.43,0.52,1.5,1.25,0.02,">1 nonsynonymous","P96T A105V N151V T201L",4
"lib2","SARS-CoV-2","TTAAAGGCACAAAATT",4,37.05,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V180S",1
"lib2","SARS-CoV-2","TTAAAGGCAGCGAAAC",27,276.29,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F44E G86P",2
"lib2","SARS-CoV-2","TTAAAGGCCCAGCCTT",2,22.27,10.79,-0.04,0.07,2.92,1.1,0,"1 nonsynonymous","P149G",1
"lib2","SARS-CoV-2","TTAAAGTAAAAGCCTA",1,0.7,NA,NA,NA,NA,NA,NA,"stop","K26M V115Y G146*",3
"lib2","SARS-CoV-2","TTAAAGTAACCCCCAA",6,49.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43M D90G F99V",3
"lib2","SARS-CoV-2","TTAAAGTAGTACTAAA",13,72.46,6,-4.84,2,3,1.18,0,">1 nonsynonymous","G9L D34N C49Y F99L F134Q E154S",6
"lib2","SARS-CoV-2","TTAAAGTATAAGAATT",2,55.23,10.84,0,0.04,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAAGTCAAGAGTAC",2,7.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48L R73L F99R T201I",4
"lib2","SARS-CoV-2","TTAAAGTCATGTCCGT",8,59.75,10.73,-0.1,0.08,2.75,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAAGTCGCTAGTGA",2,26.46,10.85,0.02,0.05,2.92,1.05,0,"1 nonsynonymous","R16S",1
"lib2","SARS-CoV-2","TTAAAGTTAAATAAAC",10,161.01,8.46,-2.38,0.1,2.58,1.03,0,">1 nonsynonymous","N1Y N64F Y159L",3
"lib2","SARS-CoV-2","TTAAAGTTAACCATGC",7,61.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F44K K87R P96L S139T G174V",5
"lib2","SARS-CoV-2","TTAAAGTTGTATAAAC",4,118.42,10.45,-0.38,0.03,2.9,1.06,0,">1 nonsynonymous","K56L F62S",2
"lib2","SARS-CoV-2","TTAAAGTTGTGCCATT",3,5.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35M S113V R136T",3
"lib2","SARS-CoV-2","TTAAATAAAAAGTAGA",5,55.83,9.16,-1.68,0.06,2.92,1.1,0,"1 nonsynonymous","Q168L",1
"lib2","SARS-CoV-2","TTAAATAAAAGCTATT",9,78.69,6,-4.84,1.52,3,1.13,0,">1 nonsynonymous","R27K L57A K94T Y119N T148N N151M",6
"lib2","SARS-CoV-2","TTAAATAAAATGAGTA",14,2.75,NA,NA,NA,NA,NA,NA,"stop","C6* N64V",2
"lib2","SARS-CoV-2","TTAAATAAACGATAGT",6,69.19,6.56,-4.27,0.38,1.5,1.14,0.02,">1 nonsynonymous","T100H S129Y Q176T",3
"lib2","SARS-CoV-2","TTAAATAAATGTCGCT",2,62.72,10.76,-0.08,0.05,2.95,1.06,0,"1 nonsynonymous","N130L",1
"lib2","SARS-CoV-2","TTAAATAAATTAAAAA",15,91.03,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","K87Q A105E G152V",3
"lib2","SARS-CoV-2","TTAAATAAGATCATGT",10,106.95,9.65,-1.19,0.04,2.86,1.11,0,"1 nonsynonymous","N109F",1
"lib2","SARS-CoV-2","TTAAATAAGATTAAAA",3,55.39,7.02,-3.81,0.36,1.65,1.1,0.02,">1 nonsynonymous","C150Q F160W",2
"lib2","SARS-CoV-2","TTAAATAAGTAAAAAC",1,15.26,9.5,-1.33,0.13,2.4,1.02,0.01,">1 nonsynonymous","A89Q L187K",2
"lib2","SARS-CoV-2","TTAAATAATAGTTGCC",1,0,NA,NA,NA,NA,NA,NA,"stop","S36* D97F P177S",3
"lib2","SARS-CoV-2","TTAAATAATATGCCAT",9,119.92,10.53,-0.31,0.04,2.9,1.07,0,"1 nonsynonymous","A22L",1
"lib2","SARS-CoV-2","TTAAATAATCAGATTA",2,22.59,9.04,-1.8,0.13,1.88,1.09,0.01,">1 nonsynonymous","S19E I142M",2
"lib2","SARS-CoV-2","TTAAATAATGTGAACA",3,63.76,6.12,-4.72,0.86,1.5,1.2,0.02,">1 nonsynonymous","E10H Y35S P54I P96S F99L",5
"lib2","SARS-CoV-2","TTAAATAATTGAGATT",1,4.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R N64R G146R",3
"lib2","SARS-CoV-2","TTAAATACACAGATAA",10,119.94,8.15,-2.68,0.29,1.5,1.07,0.03,"1 nonsynonymous","G86R",1
"lib2","SARS-CoV-2","TTAAATACATTCATTT",7,134.6,8.7,-2.14,0.07,2.96,1.03,0,">1 nonsynonymous","L111T E154H",2
"lib2","SARS-CoV-2","TTAAATACCACTCATT",6,131.51,10.21,-0.62,0.07,2.85,1.08,0,">1 nonsynonymous","A14V V32K",2
"lib2","SARS-CoV-2","TTAAATACCCCTACTT",8,196.88,10.61,-0.23,0.04,2.9,1.06,0,"1 nonsynonymous","Y178T",1
"lib2","SARS-CoV-2","TTAAATACCGTTCCTG",6,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V32N S41L P96D",3
"lib2","SARS-CoV-2","TTAAATACTCCTAATA",3,56.11,10.33,-0.5,0.03,2.97,1.04,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","TTAAATACTGAAAAGT",4,29.77,10.78,-0.05,0.07,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAATACTTATATTC",2,37.88,10.02,-0.82,0.05,2.89,1.02,0,">1 nonsynonymous","Q84R G116D S129M",3
"lib2","SARS-CoV-2","TTAAATAGATCCGCTT",3,88.85,10.82,-0.02,0.04,2.95,1.04,0,">1 nonsynonymous","A14S K198N",2
"lib2","SARS-CoV-2","TTAAATAGCATCCTAA",12,109.79,10.84,0,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAATAGGAATAAAC",5,35.11,9.12,-1.72,0.1,2.85,1.16,0.01,">1 nonsynonymous","F126W Y143L",2
"lib2","SARS-CoV-2","TTAAATAGTAACAAAA",7,0,NA,NA,NA,NA,NA,NA,"stop","C6L K56V P96* G174V",4
"lib2","SARS-CoV-2","TTAAATAGTGGGGCAT",8,35.73,9.79,-1.05,0.1,2.01,1.06,0,">1 nonsynonymous","S41H F99I",2
"lib2","SARS-CoV-2","TTAAATAGTTAGAGTT",4,80.72,9.2,-1.64,0.06,2.52,1.07,0,">1 nonsynonymous","N120E Q176R",2
"lib2","SARS-CoV-2","TTAAATATAAACATAA",5,92.6,6,-4.84,1.11,1.5,1.17,0.01,">1 nonsynonymous","A14G F44Q Y119L N130C E154C Q168R P197S",7
"lib2","SARS-CoV-2","TTAAATATAAATAGTC",8,56.01,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","I2T A42S K94S K114A P161Q P197T",6
"lib2","SARS-CoV-2","TTAAATATAAGCACGC",1,40.55,6.64,-4.2,0.38,1.5,1.01,0.03,">1 nonsynonymous","Y35Q C61W F167D",3
"lib2","SARS-CoV-2","TTAAATATATAAAGAA",4,34.7,9.59,-1.25,0.14,2.12,1.08,0.01,">1 nonsynonymous","V182C L187C",2
"lib2","SARS-CoV-2","TTAAATATATCCTAAA",10,134.58,9.25,-1.59,0.06,1.81,1.09,0,">1 nonsynonymous","R16L S29A K48M D97T N109M",5
"lib2","SARS-CoV-2","TTAAATATATGAATAC",3,96.32,9.54,-1.3,0.08,2.1,1.04,0,">1 nonsynonymous","Y39K T46Y G86S",3
"lib2","SARS-CoV-2","TTAAATATGACACATG",3,0.22,NA,NA,NA,NA,NA,NA,"stop","N1I A33G Y91* C150P Y165R",5
"lib2","SARS-CoV-2","TTAAATATGATTTATA",2,15.12,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","V181G",1
"lib2","SARS-CoV-2","TTAAATATGCCGTGAA",5,71.83,10.6,-0.23,0.05,2.88,1.13,0,"1 nonsynonymous","F134A",1
"lib2","SARS-CoV-2","TTAAATCAATCTTGGT",7,187.81,9.75,-1.08,0.05,2.08,1.05,0,">1 nonsynonymous","K26R V173T",2
"lib2","SARS-CoV-2","TTAAATCAATGAAAGT",1,21.41,10.87,0.03,0.05,3,1.01,0,"1 nonsynonymous","S184I",1
"lib2","SARS-CoV-2","TTAAATCAATGCAGGT",3,1.8,NA,NA,NA,NA,NA,NA,"stop","A42H Y50L T100H Y119* E186H",5
"lib2","SARS-CoV-2","TTAAATCAGATACTCA",5,68.45,6,-4.84,2,3,1.16,0,">1 nonsynonymous","Y93I A105E Y119L",3
"lib2","SARS-CoV-2","TTAAATCATCCAAAAT",5,49.66,10.73,-0.1,0.04,2.95,1.03,0,">1 nonsynonymous","S43P E141A",2
"lib2","SARS-CoV-2","TTAAATCATGGGGGCG",1,0.15,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TTAAATCATGGTCAGG",3,25.35,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T63H D137L T170N K199V",4
"lib2","SARS-CoV-2","TTAAATCATTATTCCG",2,15.77,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","K87S F167C",2
"lib2","SARS-CoV-2","TTAAATCCACATACCA",2,37.74,10.27,-0.57,0.07,2.85,1.13,0,">1 nonsynonymous","L57F G116E",2
"lib2","SARS-CoV-2","TTAAATCCCAGCAGGA",2,53.11,10.87,0.04,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAATCCCCATGAAA",8,25.55,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F44C N92D A105N C158N",4
"lib2","SARS-CoV-2","TTAAATCCGCACGACA",5,17.7,6.46,-4.37,0.35,1.5,1.09,0.01,">1 nonsynonymous","S19R S41I G117P",3
"lib2","SARS-CoV-2","TTAAATCCGTATCCAT",8,3.97,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M V115E F167I",3
"lib2","SARS-CoV-2","TTAAATCCTAACTTAC",1,19.28,6.42,-4.42,0.69,1.5,1.12,0.05,">1 nonsynonymous","A14D K56G I80L D90F D98N V103L P197M",7
"lib2","SARS-CoV-2","TTAAATCGCACAATTC",5,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12Q T100R K198T",3
"lib2","SARS-CoV-2","TTAAATCGTTAAAAAG",9,1.99,NA,NA,NA,NA,NA,NA,"stop","Y50Q R136*",2
"lib2","SARS-CoV-2","TTAAATCGTTTAAAAA",2,40,10.13,-0.7,0.06,2.87,1.02,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","TTAAATCTAAATTAAG",1,14.85,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","W23R V52P T85K F126K E154R",5
"lib2","SARS-CoV-2","TTAAATCTATATGCAA",4,24.46,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S29A I104L K114C R124D E154L",5
"lib2","SARS-CoV-2","TTAAATCTCCGGACAA",7,48.15,8.83,-2,0.11,2.02,1.07,0,">1 nonsynonymous","A22G Y121S",2
"lib2","SARS-CoV-2","TTAAATCTCCTAGGAT",5,71.75,10.43,-0.4,0.08,2.72,1.04,0,">1 nonsynonymous","C61M A81T",2
"lib2","SARS-CoV-2","TTAAATCTTCTGGTGA",8,109.01,10.39,-0.45,0.04,2.94,1.06,0,">1 nonsynonymous","F62L Y121L",2
"lib2","SARS-CoV-2","TTAAATCTTTTGAAAA",8,0.77,NA,NA,NA,NA,NA,NA,"stop","V37L T55N C61* F99S S139I",5
"lib2","SARS-CoV-2","TTAAATGAAGAAACAT",2,12.75,6,-4.84,2,1.5,1.15,0.07,">1 nonsynonymous","A22S R136C Y143A T201L",4
"lib2","SARS-CoV-2","TTAAATGAATATAAGC",2,0.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y C49Y V77H A105R Y159C F167C",6
"lib2","SARS-CoV-2","TTAAATGACAATGCTG",8,107.28,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","N4C R25E G86K",3
"lib2","SARS-CoV-2","TTAAATGACAGCAATG",10,156.1,9.21,-1.63,0.03,2.88,1.11,0,"1 nonsynonymous","G166I",1
"lib2","SARS-CoV-2","TTAAATGACTCGACGC",4,58.31,10.85,0.01,0.05,2.92,1.1,0,">1 nonsynonymous","V37G P197M",2
"lib2","SARS-CoV-2","TTAAATGAGAAAATAG",1,33.29,7.81,-3.03,0.35,1.5,1.13,0.05,">1 nonsynonymous","A89R T100N",2
"lib2","SARS-CoV-2","TTAAATGAGCGTATCT",2,103.72,10.47,-0.37,0.03,2.93,1.06,0,">1 nonsynonymous","P7N N107P",2
"lib2","SARS-CoV-2","TTAAATGATTACCACG",3,15.45,6.05,-4.78,1.52,1.5,1.24,0.04,">1 nonsynonymous","S41V K56P W106S",3
"lib2","SARS-CoV-2","TTAAATGCCCTTGACT",3,4.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I138Y",1
"lib2","SARS-CoV-2","TTAAATGCCTCCAAGT",9,0.05,NA,NA,NA,NA,NA,NA,"stop","A22* Y39R W106G G166I",4
"lib2","SARS-CoV-2","TTAAATGCGGGAGTAG",7,129.47,10.52,-0.31,0.05,2.89,1.08,0,">1 nonsynonymous","N4Y G9R",2
"lib2","SARS-CoV-2","TTAAATGGATACTTTC",4,16.36,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F8V F12L S41L F99Y L187I",5
"lib2","SARS-CoV-2","TTAAATGGCTATGGAA",4,35.47,10.44,-0.4,0.06,2.97,1.04,0,">1 nonsynonymous","V37T F156A",2
"lib2","SARS-CoV-2","TTAAATGGGCTCAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","F17* C61N N92K A105T Y165K",5
"lib2","SARS-CoV-2","TTAAATGTACCTATCA",1,13.56,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","K48V P82T I88C T201N",4
"lib2","SARS-CoV-2","TTAAATGTCAGATTAA",7,81.96,10.92,0.08,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAATGTTGAAATGT",3,0.21,NA,NA,NA,NA,NA,NA,"stop","R27K N40H C61P A67P I104* R124A",6
"lib2","SARS-CoV-2","TTAAATTAAATAGATT",2,17.69,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","F8A G101F T140Y",3
"lib2","SARS-CoV-2","TTAAATTAAGACCTCA",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3K F8R L38Y Q84L Y175L",5
"lib2","SARS-CoV-2","TTAAATTACCGAAAAC",4,32.61,10.92,0.09,0.07,2.91,1.09,0,"1 nonsynonymous","K128N",1
"lib2","SARS-CoV-2","TTAAATTAGTTAATCG",2,16.83,6,-4.84,1.56,1.5,1.11,0.01,">1 nonsynonymous","S36L D68Q",2
"lib2","SARS-CoV-2","TTAAATTATAGGGTAA",1,56.81,10.7,-0.13,0.03,2.94,1.07,0,">1 nonsynonymous","T15R L122V K199T",3
"lib2","SARS-CoV-2","TTAAATTCAAGTTCAA",1,7.43,8.45,-2.39,0.2,1.99,1.08,0.01,">1 nonsynonymous","C6P L122C S139R",3
"lib2","SARS-CoV-2","TTAAATTCACTGAATA",9,132.05,8.03,-2.81,0.15,1.95,1.1,0.01,">1 nonsynonymous","C6M A22E G146T",3
"lib2","SARS-CoV-2","TTAAATTCTATTGGGG",6,77.41,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","L38Y C61W V103E R124Y",4
"lib2","SARS-CoV-2","TTAAATTCTTACGAAA",2,21.36,6,-4.84,1.93,3,1.17,0.01,">1 nonsynonymous","V20R G51F D90F V115R T148W T170L",6
"lib2","SARS-CoV-2","TTAAATTGAAATTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T Y50R",2
"lib2","SARS-CoV-2","TTAAATTGCAAATGTG",7,5.59,NA,NA,NA,NA,NA,NA,"stop","K56S W106Q N157*",3
"lib2","SARS-CoV-2","TTAAATTGGAATAAGC",3,33.58,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5F L111G V115F R179N",4
"lib2","SARS-CoV-2","TTAAATTTAGCTACCT",2,5.52,6.12,-4.72,1.87,3,1.15,0,">1 nonsynonymous","L5K D68E C150F",3
"lib2","SARS-CoV-2","TTAAATTTAGCTCTAA",10,91.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V103E D112Q Q144K G155T",4
"lib2","SARS-CoV-2","TTAAATTTCTACTATG",1,7.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14W Q84I Y119N",3
"lib2","SARS-CoV-2","TTAAATTTTACGAGTT",7,145.7,10.86,0.02,0.06,2.87,1.14,0,">1 nonsynonymous","P54A T201L",2
"lib2","SARS-CoV-2","TTAACAAAAACTAGCA",3,14.02,8.11,-2.72,0.35,1.5,1.07,0.05,">1 nonsynonymous","F12H A18T P54H",3
"lib2","SARS-CoV-2","TTAACAAAAAGCTCAA",2,25.61,8.81,-2.02,0.09,1.66,1.04,0,">1 nonsynonymous","L38Q R78E D90M N120E S147G A190H K199S",7
"lib2","SARS-CoV-2","TTAACAAAACAGAACG",7,2012.04,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G83S F99Q K132M",3
"lib2","SARS-CoV-2","TTAACAAACGACCCGG",2,4.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96Q",1
"lib2","SARS-CoV-2","TTAACAAAGGAATTAT",1,0.63,NA,NA,NA,NA,NA,NA,"stop","G9K D34L S41* E141L",4
"lib2","SARS-CoV-2","TTAACAAATACAGAAT",1,11.18,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3S V37D I88Y F156C",4
"lib2","SARS-CoV-2","TTAACAAATAGAACCA",2,10.36,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N13R Y165D",2
"lib2","SARS-CoV-2","TTAACAAATATAGAAT",2,1.52,NA,NA,NA,NA,NA,NA,"stop","N24P G86V F99Y E135S T140* P149G N157A",7
"lib2","SARS-CoV-2","TTAACAAATCTCTACT",5,116.44,10.45,-0.38,0.03,2.92,1.07,0,">1 nonsynonymous","L5G F134A",2
"lib2","SARS-CoV-2","TTAACAACAATCTACC",6,80.31,6,-4.84,2,2.58,1.21,0,">1 nonsynonymous","G86R G146E Q176L",3
"lib2","SARS-CoV-2","TTAACAACAATGCCAG",1,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4F L60D R78S D97L Y178S",5
"lib2","SARS-CoV-2","TTAACAACACATATTC",2,50.08,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","F44R D59W L95Y F99I V115Y P177I",6
"lib2","SARS-CoV-2","TTAACAACCGACTTAT",10,16.62,6,-4.84,2,2.19,1.42,0.02,">1 nonsynonymous","P7R L38Q V103S C158S",4
"lib2","SARS-CoV-2","TTAACAACCTATGAGT",8,226.75,10.77,-0.07,0.03,2.95,1.06,0,"1 nonsynonymous","N4G",1
"lib2","SARS-CoV-2","TTAACAAGGGACCCAA",12,164.2,10.76,-0.08,0.04,2.95,1.07,0,"1 nonsynonymous","C61T",1
"lib2","SARS-CoV-2","TTAACAAGTGAGACTA",5,0.99,NA,NA,NA,NA,NA,NA,"stop","K87G W106*",2
"lib2","SARS-CoV-2","TTAACAAGTGCCATCG",1,18.14,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V32R K56A G116N T140S C150I",5
"lib2","SARS-CoV-2","TTAACAATCTAGTATG",11,83.51,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","C102Y L162E",2
"lib2","SARS-CoV-2","TTAACAATGCCAAAGA",2,27.43,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","W23L G117S G146L",3
"lib2","SARS-CoV-2","TTAACAATTCAGTCCA",2,44.31,9.64,-1.19,0.06,2.01,1.05,0,">1 nonsynonymous","N4K G9M I104T T140F",4
"lib2","SARS-CoV-2","TTAACACAAAATACGA",8,1.63,NA,NA,NA,NA,NA,NA,"stop","F17L T201*",2
"lib2","SARS-CoV-2","TTAACACAAGAAATCA",2,47.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R27A L38I S45K D112L P149R",5
"lib2","SARS-CoV-2","TTAACACACAAACCTT",2,5.64,6.77,-4.06,0.78,1.5,1.12,0.05,">1 nonsynonymous","R27W R78H A105T D112Y",4
"lib2","SARS-CoV-2","TTAACACATGGGTGAG",4,43.45,10.44,-0.4,0.06,2.76,1.15,0,">1 nonsynonymous","F62L I138A Y178F",3
"lib2","SARS-CoV-2","TTAACACCCAAATGGT",5,13.1,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N13R V115E L131H",3
"lib2","SARS-CoV-2","TTAACACTAAGCTCAT",6,46.6,9.46,-1.38,0.18,1.51,1.05,0.01,"1 nonsynonymous","P82Q",1
"lib2","SARS-CoV-2","TTAACACTAATAGAAT",6,3.51,NA,NA,NA,NA,NA,NA,"stop","I72* L122Q",2
"lib2","SARS-CoV-2","TTAACACTCCCGAAAT",4,52.03,10.82,-0.02,0.05,2.87,1.15,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","TTAACACTCTAGAGCT",4,24.25,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F47M S69P A105K",3
"lib2","SARS-CoV-2","TTAACACTGCAACTTA",1,5.13,NA,NA,NA,NA,NA,0.32,"1 nonsynonymous","R124L",1
"lib2","SARS-CoV-2","TTAACACTTTTTTTAT",14,335.38,10.18,-0.65,0.04,2.77,1.04,0,">1 nonsynonymous","T3L N13G K114M",3
"lib2","SARS-CoV-2","TTAACAGAACTCCAAA",9,258.6,8.69,-2.15,0.06,2.98,1.07,0,">1 nonsynonymous","S36D S41I A145D",3
"lib2","SARS-CoV-2","TTAACAGCAAATAGAG",4,25.49,9.66,-1.18,0.1,2.57,1.1,0,"1 nonsynonymous","Y121T",1
"lib2","SARS-CoV-2","TTAACAGCAACAACAA",8,108.98,8.14,-2.7,0.26,1.5,1,0.03,">1 nonsynonymous","Y91H V103G T170C",3
"lib2","SARS-CoV-2","TTAACAGCCCTTAACC",9,0.53,NA,NA,NA,NA,NA,NA,"stop","W23* Q168K",2
"lib2","SARS-CoV-2","TTAACAGCGACATCTT",9,147.03,10.85,0.02,0.06,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACAGCTGACTTTA",1,29.4,10.78,-0.06,0.08,2.94,1.09,0,"1 nonsynonymous","L5H",1
"lib2","SARS-CoV-2","TTAACAGGAAGTTCTT",1,0.86,NA,NA,NA,NA,NA,NA,"stop","G86*",1
"lib2","SARS-CoV-2","TTAACAGTAAATTACC",6,45.2,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V11T Y50V T85I Y119P T201L",5
"lib2","SARS-CoV-2","TTAACAGTCCCCATAT",1,48.31,10.12,-0.72,0.04,2.87,1.08,0,">1 nonsynonymous","G83F E135M V153T",3
"lib2","SARS-CoV-2","TTAACAGTGAGAAACG",5,13.84,8.29,-2.55,0.19,1.86,1.23,0.02,">1 nonsynonymous","T3W P96A E135M",3
"lib2","SARS-CoV-2","TTAACAGTTCTCTGAA",5,1.59,NA,NA,NA,NA,NA,NA,"stop","Y35* F99K S139N",3
"lib2","SARS-CoV-2","TTAACAGTTGTACAAA",10,160.94,10.79,-0.05,0.03,2.91,1.11,0,">1 nonsynonymous","V37A S129I",2
"lib2","SARS-CoV-2","TTAACATATAATACTG",4,69.31,10.31,-0.52,0.09,2.6,1.15,0,">1 nonsynonymous","E135C E154K",2
"lib2","SARS-CoV-2","TTAACATATACAGTGC",3,11.42,6.91,-3.93,0.42,1.5,1.14,0.04,">1 nonsynonymous","N4K W23S V52Y Y178H",4
"lib2","SARS-CoV-2","TTAACATATGATTCTT",12,6.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V T15Y V77W G83D T100N Y121E",6
"lib2","SARS-CoV-2","TTAACATCAATCAATG",2,27.48,8.76,-2.08,0.25,2,1.07,0.02,">1 nonsynonymous","Y91E T201N",2
"lib2","SARS-CoV-2","TTAACATCATACTCTA",1,88.66,10.31,-0.52,0.03,2.94,1.01,0,"1 nonsynonymous","S19D",1
"lib2","SARS-CoV-2","TTAACATCCAACCAAC",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183T",1
"lib2","SARS-CoV-2","TTAACATCTTGCGTAG",11,133.33,9.96,-0.88,0.04,2.73,1.03,0,">1 nonsynonymous","P7F F44V",2
"lib2","SARS-CoV-2","TTAACATGAAATTGGA",3,105.19,8.24,-2.59,0.13,2.28,1.07,0.01,">1 nonsynonymous","N64K S113I",2
"lib2","SARS-CoV-2","TTAACATGCGGTTGAA",2,40.9,10.57,-0.26,0.04,2.9,1.1,0,">1 nonsynonymous","G9K G83M",2
"lib2","SARS-CoV-2","TTAACATGCTGATCCG",6,79.99,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y143L G155V E186Y",3
"lib2","SARS-CoV-2","TTAACATGGCCGTCCA",4,142.95,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G172L L187Q",2
"lib2","SARS-CoV-2","TTAACATTAAATAGTT",3,34.87,9.76,-1.08,0.1,2.23,1,0,"1 nonsynonymous","F17S",1
"lib2","SARS-CoV-2","TTAACATTAGAACCAA",10,185,10.73,-0.1,0.04,2.91,1.11,0,"1 nonsynonymous","L60A",1
"lib2","SARS-CoV-2","TTAACATTCTCCACAA",10,39.63,6.5,-4.33,0.46,1.5,1.12,0.02,">1 nonsynonymous","C6A I28M G101V S200H",4
"lib2","SARS-CoV-2","TTAACATTGACGGAAG",3,44.88,10.8,-0.03,0.04,3,1,0,"1 nonsynonymous","F62S",1
"lib2","SARS-CoV-2","TTAACATTGTCATAAA",6,0.25,NA,NA,NA,NA,NA,NA,"stop","N40M Y91* D98A W106R Y119S L131G",6
"lib2","SARS-CoV-2","TTAACATTTTGGAACC",2,5.9,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","W106L G155L P169T Y175I R179F",5
"lib2","SARS-CoV-2","TTAACCAAATATATTT",3,27.77,7.02,-3.81,0.34,1.5,1.07,0.03,">1 nonsynonymous","R16L S29F G83V A105S",4
"lib2","SARS-CoV-2","TTAACCAATCACACAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57C S69K T201K",3
"lib2","SARS-CoV-2","TTAACCAATCGGTATC",7,1.04,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib2","SARS-CoV-2","TTAACCAATGATTTAA",6,84.45,10.15,-0.69,0.09,2.47,1.07,0,">1 nonsynonymous","P133I A190T",2
"lib2","SARS-CoV-2","TTAACCACCGTAGAAA",1,34.44,10.84,0,0.06,2.89,1.12,0,">1 nonsynonymous","Y39T V194A K198L",3
"lib2","SARS-CoV-2","TTAACCACTACATTCA",1,0.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R S45Y F99N N118E",4
"lib2","SARS-CoV-2","TTAACCAGAATAAAGG",3,20.57,10.85,0.01,0.07,2.97,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACCAGATATCTAA",10,3.74,NA,NA,NA,NA,NA,NA,"stop","C31Y F44* P82C G117A",4
"lib2","SARS-CoV-2","TTAACCAGATGAGACC",2,78.12,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36M Q79H S113K T140Y P149L P197Y",6
"lib2","SARS-CoV-2","TTAACCAGCTCTTATT",1,35.05,9.95,-0.88,0.04,2.96,1,0,">1 nonsynonymous","A81S Q168N",2
"lib2","SARS-CoV-2","TTAACCAGTCACTCCG",8,77.77,6,-4.84,1.09,1.5,1.15,0.01,">1 nonsynonymous","I72K T201R",2
"lib2","SARS-CoV-2","TTAACCATAAACGGTC",2,13.18,8.39,-2.45,0.31,1.5,1.04,0.06,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","TTAACCATATATAACT",3,8.83,NA,NA,NA,NA,NA,0.33,">1 nonsynonymous","D34I P54S I88T",3
"lib2","SARS-CoV-2","TTAACCATTATCTAAC",9,184.45,10.84,0.01,0.04,2.93,1.08,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","TTAACCCAACACATCT",16,196.72,10.23,-0.6,0.04,2.86,1.07,0,">1 nonsynonymous","N1Y G116I",2
"lib2","SARS-CoV-2","TTAACCCACAGCGAGG",3,104.69,7.97,-2.87,0.12,1.73,1.1,0.01,">1 nonsynonymous","A42G N120L Y143S G196S",4
"lib2","SARS-CoV-2","TTAACCCAGCACAACA",20,446.78,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G117L F126Q P177L",3
"lib2","SARS-CoV-2","TTAACCCCAGCGGAGG",2,0.03,NA,NA,NA,NA,NA,NA,"stop","A18* S43L Q176P",3
"lib2","SARS-CoV-2","TTAACCCCCCTGATCT",4,68.54,10.87,0.03,0.07,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACCCGGACAGCAA",3,3.6,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","TTAACCCGTCAATTAG",12,149.28,9.26,-1.58,0.03,2.92,1.07,0,">1 nonsynonymous","I2V Y119M V194I",3
"lib2","SARS-CoV-2","TTAACCCGTGACACCA",14,160.89,10.54,-0.3,0.03,2.94,1.07,0,">1 nonsynonymous","C61Y K87Y T201H",3
"lib2","SARS-CoV-2","TTAACCCTCTATGTAT",6,133.04,10.11,-0.72,0.06,2.49,1,0,"1 nonsynonymous","I88M",1
"lib2","SARS-CoV-2","TTAACCCTTTTCGAAA",8,109.32,9.27,-1.56,0.21,1.58,1.06,0.02,">1 nonsynonymous","A14M I28N V173I",3
"lib2","SARS-CoV-2","TTAACCGAAATAAACG",3,38.16,10.8,-0.04,0.09,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACCGACGGTTAGG",2,15.81,6,-4.84,2,3,1.08,0,">1 nonsynonymous","R27W K94V D112L Q176C",4
"lib2","SARS-CoV-2","TTAACCGACTCAACGT",3,21.24,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","F47Y N120E N130S Y165N R179V",5
"lib2","SARS-CoV-2","TTAACCGCCACGGCTA",5,71.76,9.47,-1.37,0.07,1.99,1.07,0,"1 nonsynonymous","I28R",1
"lib2","SARS-CoV-2","TTAACCGCCCGCCGCA",4,45.53,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","C6Q C49K N107Y",3
"lib2","SARS-CoV-2","TTAACCGCTATATGGC",12,62.36,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T85S G101Q",2
"lib2","SARS-CoV-2","TTAACCGGACCAGTCT",3,85.68,10.88,0.04,0.06,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACCGTATCCCATA",1,0.56,NA,NA,NA,NA,NA,NA,"stop","K56L Y91L T201*",3
"lib2","SARS-CoV-2","TTAACCGTGAAAAGTT",6,116.45,8.48,-2.36,0.21,1.5,1.02,0.02,">1 nonsynonymous","L38N F44T K132Q",3
"lib2","SARS-CoV-2","TTAACCTAAATTCTTG",13,40.88,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","G101D N130T T148I N171M",4
"lib2","SARS-CoV-2","TTAACCTAAGATGTAG",2,8.34,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","V32H N40D V77P L131Y",4
"lib2","SARS-CoV-2","TTAACCTAAGTTCCAC",3,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H F70N A89R C150G L183M",5
"lib2","SARS-CoV-2","TTAACCTACAGTTTAC",13,30.08,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","F12N S19H C61M G86V R127T",5
"lib2","SARS-CoV-2","TTAACCTACTACCTCC",4,72.56,9.52,-1.32,0.05,2.94,1.04,0,"1 nonsynonymous","Y143V",1
"lib2","SARS-CoV-2","TTAACCTATCAAAAAG",2,30.97,10.77,-0.07,0.07,2.87,1.19,0,"1 nonsynonymous","C61H",1
"lib2","SARS-CoV-2","TTAACCTATCTTAATA",5,101.5,10.48,-0.36,0.03,2.91,1.08,0,">1 nonsynonymous","G116R V153D",2
"lib2","SARS-CoV-2","TTAACCTATGTCTGTC",10,168.04,8.88,-1.96,0.04,2.96,1.07,0,">1 nonsynonymous","N64W Y119D G152S",3
"lib2","SARS-CoV-2","TTAACCTGGATAAACT",4,45.2,8.42,-2.42,0.16,1.65,1.11,0.02,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","TTAACCTGGTAACGTG",4,0.61,NA,NA,NA,NA,NA,NA,"stop","S19M I88*",2
"lib2","SARS-CoV-2","TTAACCTGTCAATAAG",5,105.37,8.12,-2.71,0.15,1.79,1.11,0.01,">1 nonsynonymous","T148S N171K",2
"lib2","SARS-CoV-2","TTAACGAAAACATCAG",3,16.93,10.61,-0.23,0.11,2.82,1.06,0,"1 nonsynonymous","S41K",1
"lib2","SARS-CoV-2","TTAACGAAACAATCAT",9,5.39,NA,NA,NA,NA,NA,NA,"stop","N107R S139* S164H P177R T201M",5
"lib2","SARS-CoV-2","TTAACGAAACCAATCA",9,51.87,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V52Y D68R A89R S129T E154S",5
"lib2","SARS-CoV-2","TTAACGAAATGTAGGC",3,73.64,10.69,-0.14,0.06,2.92,1.09,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","TTAACGAAGCGCCATC",13,197.28,10.73,-0.11,0.06,2.9,1.11,0,"1 nonsynonymous","L60I",1
"lib2","SARS-CoV-2","TTAACGAAGCTATAAT",5,0.21,NA,NA,NA,NA,NA,NA,"stop","Y21K L38C K87* D98E Y143R",5
"lib2","SARS-CoV-2","TTAACGAATACATGCT",6,21.38,9.22,-1.61,0.14,1.5,1.12,0.01,">1 nonsynonymous","P82R N120R",2
"lib2","SARS-CoV-2","TTAACGAATCTTCTTA",19,354.19,9.66,-1.18,0.04,2.3,1.06,0,">1 nonsynonymous","D59F N107R",2
"lib2","SARS-CoV-2","TTAACGACAAGATTAG",1,0.1,NA,NA,NA,NA,NA,NA,"stop","Y50* F70S",2
"lib2","SARS-CoV-2","TTAACGACATAATGGA",5,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N P82S G86F E186L",4
"lib2","SARS-CoV-2","TTAACGACTTAACTGA",18,97.23,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","G9M A22S A67N F99C",4
"lib2","SARS-CoV-2","TTAACGACTTTAACGG",2,0,NA,NA,NA,NA,NA,NA,"stop","F44C G83W V103H Y175D K198*",5
"lib2","SARS-CoV-2","TTAACGAGAGAAGGGT",11,3.54,NA,NA,NA,NA,NA,NA,"stop","Y119* G146M",2
"lib2","SARS-CoV-2","TTAACGATACTGCAAC",11,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C6V",1
"lib2","SARS-CoV-2","TTAACGATAGCATAAC",5,0.02,NA,NA,NA,NA,NA,NA,"stop","F62S G83P A89V K94S Y119* T201R",6
"lib2","SARS-CoV-2","TTAACGATTTGGAGAA",7,24.24,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","I88R T148S P161K",3
"lib2","SARS-CoV-2","TTAACGCACCTAATGG",1,14.74,6.1,-4.74,0.73,2.1,1.21,0.01,">1 nonsynonymous","C6A A81I",2
"lib2","SARS-CoV-2","TTAACGCAGGGTCACT",5,98.92,7.9,-2.93,0.14,1.73,1.21,0.01,"1 nonsynonymous","Y165K",1
"lib2","SARS-CoV-2","TTAACGCCAAAGAACC",5,51.64,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","V37C A89D P96R",3
"lib2","SARS-CoV-2","TTAACGCCCAATTTGT",1,54.47,9.61,-1.22,0.11,2.4,1.15,0.01,">1 nonsynonymous","Y35E V115T E141S",3
"lib2","SARS-CoV-2","TTAACGCCCATTAACG",4,152.1,10.83,0,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAACGCCTACATAAA",1,3.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108L F156Y",2
"lib2","SARS-CoV-2","TTAACGCGAATTATCC",8,40.59,9.68,-1.16,0.1,2.2,1.11,0.01,">1 nonsynonymous","S41W F47Y D97C",3
"lib2","SARS-CoV-2","TTAACGCGACTCAACA",8,1.1,NA,NA,NA,NA,NA,NA,"stop","L5*",1
"lib2","SARS-CoV-2","TTAACGCGATATCGCG",1,21.74,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V11P S19V S69L G152S Y175K",5
"lib2","SARS-CoV-2","TTAACGCGTTGCGTAA",10,63.91,9.76,-1.07,0.06,2.35,1.09,0,">1 nonsynonymous","G83N N120M R127S",3
"lib2","SARS-CoV-2","TTAACGCTAGTGCTTA",2,48.58,6.42,-4.42,0.31,1.5,1.11,0.01,">1 nonsynonymous","T55L A105R S129E G152D Y165V",5
"lib2","SARS-CoV-2","TTAACGCTCACGCTTA",3,186.75,9.41,-1.43,0.05,2.76,1.07,0,">1 nonsynonymous","N110S Q176R P197R",3
"lib2","SARS-CoV-2","TTAACGCTGCTAGCCT",1,6.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3R I104L V153I",3
"lib2","SARS-CoV-2","TTAACGGAAATAAGAA",11,143.85,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","N30W S41L Q84H T100N G155L S164K",6
"lib2","SARS-CoV-2","TTAACGGACGGATACG",6,29.36,6,-4.84,1.68,3,1.22,0.01,">1 nonsynonymous","C6W N109W S129P",3
"lib2","SARS-CoV-2","TTAACGGCACCTAAGC",10,208.95,10.78,-0.06,0.03,2.98,1.02,0,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","TTAACGGCATTGACAG",3,9.3,10.94,0.1,0.12,2.98,1.06,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","TTAACGGCCGAGGGGA",15,281.58,10.13,-0.7,0.04,2.86,1.01,0,">1 nonsynonymous","I2D E10V V65A K128Q",4
"lib2","SARS-CoV-2","TTAACGGTAATCAATT",2,12,6.39,-4.45,0.19,1.5,1.04,0,">1 nonsynonymous","R16T Y35I D90R Y123G V153M F160C",6
"lib2","SARS-CoV-2","TTAACGTAAGACTTTA",6,57.48,6,-4.84,1.18,1.5,1.13,0.02,">1 nonsynonymous","N4F A145T N157M S184N",4
"lib2","SARS-CoV-2","TTAACGTACAAAAATT",1,6.81,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","I2L N92S I138S F160V P169F P191T",6
"lib2","SARS-CoV-2","TTAACGTAGAAAGACC",6,100.61,10.86,0.03,0.05,2.91,1.07,0,"1 nonsynonymous","L162I",1
"lib2","SARS-CoV-2","TTAACGTCTGCAAATC",1,12,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","TTAACTAAAAACCAAC",1,3.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S108G G117S T140N G152V E154F",5
"lib2","SARS-CoV-2","TTAACTAAAAGCCTAC",4,37.2,6,-4.84,2,3,1.15,0,">1 nonsynonymous","A105L E141L E186R",3
"lib2","SARS-CoV-2","TTAACTAAAATTACAT",5,38.91,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","V103F",1
"lib2","SARS-CoV-2","TTAACTAAAGCCGAAA",3,44.25,9.05,-1.79,0.07,2.88,1.1,0,">1 nonsynonymous","A89S S147R E154N G174E",4
"lib2","SARS-CoV-2","TTAACTAACGCCCTGC",6,85.88,10.87,0.03,0.05,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAACTAAGCTTCCAT",11,73.42,8.23,-2.61,0.19,1.81,1.1,0.01,"1 nonsynonymous","Y121D",1
"lib2","SARS-CoV-2","TTAACTAAGTCTTCTA",4,27.47,8.75,-2.09,0.28,1.5,1.04,0.04,">1 nonsynonymous","K56T V103C",2
"lib2","SARS-CoV-2","TTAACTAGAACGTATC",9,40.34,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","A18T K48A V77C F99G",4
"lib2","SARS-CoV-2","TTAACTAGATTCATAA",4,56.76,8.78,-2.05,0.08,1.93,1.09,0,">1 nonsynonymous","S43N E76G G116S N130H",4
"lib2","SARS-CoV-2","TTAACTAGGAAAGCAT",3,81.27,10.55,-0.29,0.05,2.99,1,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","TTAACTAGGGATTGGA",8,1.24,NA,NA,NA,NA,NA,NA,"stop","D90V L95R E154*",3
"lib2","SARS-CoV-2","TTAACTATAAGCCCGT",7,142.08,10.59,-0.24,0.03,2.94,1.08,0,">1 nonsynonymous","T55G T63I",2
"lib2","SARS-CoV-2","TTAACTATAAGCTATA",1,3.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6Q A33S Q84A F99L D112T L122S",6
"lib2","SARS-CoV-2","TTAACTATAATATAAA",12,130.84,8.94,-1.9,0.08,1.93,1.12,0,">1 nonsynonymous","P7I N107K",2
"lib2","SARS-CoV-2","TTAACTATCACAAACA",7,74.11,10.63,-0.21,0.05,2.94,1.06,0,">1 nonsynonymous","Y121M Q168R",2
"lib2","SARS-CoV-2","TTAACTATTATAATAT",2,0.15,NA,NA,NA,NA,NA,NA,"stop","E10* T140R",2
"lib2","SARS-CoV-2","TTAACTCAATCTGAGG",10,26.04,6,-4.84,2,3,1.11,0,">1 nonsynonymous","R16Y V77E D97Y N107D T148L",5
"lib2","SARS-CoV-2","TTAACTCACAACATTA",12,83.84,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","D112Y F126R Q176L",3
"lib2","SARS-CoV-2","TTAACTCAGTGGTCCT",13,185.14,10.89,0.05,0.05,2.91,1.08,0,"1 nonsynonymous","S43M",1
"lib2","SARS-CoV-2","TTAACTCCAGAAATTT",6,100.46,10.39,-0.45,0.05,2.92,1.05,0,">1 nonsynonymous","F44I Y123M",2
"lib2","SARS-CoV-2","TTAACTCCATCTAGAT",7,108.68,10.9,0.07,0.05,2.96,1.04,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","TTAACTCCTTCTAATT",1,8.31,10.09,-0.75,0.2,2.76,1.04,0.01,">1 nonsynonymous","T3R A14V",2
"lib2","SARS-CoV-2","TTAACTCGCTGTCATT",1,23.04,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","N4V K128T C150L",3
"lib2","SARS-CoV-2","TTAACTCGGGCCTAAG",1,76.83,10.92,0.09,0.07,2.91,1.11,0,">1 nonsynonymous","V173L T201L",2
"lib2","SARS-CoV-2","TTAACTCGGGTCACTT",3,48.05,10.85,0.01,0.06,2.96,1.05,0,">1 nonsynonymous","S43G T55D",2
"lib2","SARS-CoV-2","TTAACTCTAAAAAGTT",2,8.74,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P54S G101M Q168A",3
"lib2","SARS-CoV-2","TTAACTCTCATGAAGT",3,22.98,9.43,-1.4,0.18,1.56,1.1,0.02,">1 nonsynonymous","A18D K94V",2
"lib2","SARS-CoV-2","TTAACTCTCTAAGTAA",9,114.98,9.42,-1.41,0.09,1.91,1.09,0,">1 nonsynonymous","S69V P169T P197A",3
"lib2","SARS-CoV-2","TTAACTGAAAATAGGG",3,67.79,10.52,-0.31,0.06,2.93,1.06,0,">1 nonsynonymous","T15V L122Y",2
"lib2","SARS-CoV-2","TTAACTGAAACGCCCG",7,43.74,6,-4.84,1.16,1.5,1.19,0.01,">1 nonsynonymous","D59S D68A K87F N157S",4
"lib2","SARS-CoV-2","TTAACTGAAATGTTAC",10,22.32,6,-4.84,2,1.5,1.32,0.03,">1 nonsynonymous","K56H D90L N107F V182A",4
"lib2","SARS-CoV-2","TTAACTGACCAATAGA",13,277.35,10.67,-0.16,0.04,2.91,1.05,0,"1 nonsynonymous","E10P",1
"lib2","SARS-CoV-2","TTAACTGAGAACCTTC",1,33.38,8.84,-1.99,0.34,1.5,1.06,0.05,">1 nonsynonymous","L60G I72V G86V R124M",4
"lib2","SARS-CoV-2","TTAACTGATAATAGGA",4,84.54,6,-4.84,1.64,1.5,1.14,0.01,">1 nonsynonymous","N107G D112L G174E",3
"lib2","SARS-CoV-2","TTAACTGCGCAGGCAC",2,58.64,9.72,-1.12,0.1,2.1,1.06,0,">1 nonsynonymous","L57D N64K P133A",3
"lib2","SARS-CoV-2","TTAACTGGAAAGAACC",3,21.52,10.44,-0.39,0.1,2.88,1,0,">1 nonsynonymous","S69F S200T",2
"lib2","SARS-CoV-2","TTAACTGGATGCGTTT",2,63.07,10.73,-0.11,0.05,2.88,1.07,0,">1 nonsynonymous","F8L K48V",2
"lib2","SARS-CoV-2","TTAACTGGCGTATAGC",2,18.91,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","T55D S113M C158A G174R L187C",5
"lib2","SARS-CoV-2","TTAACTGGCTAAAATG",7,5.32,NA,NA,NA,NA,NA,NA,"stop","Y39G A105*",2
"lib2","SARS-CoV-2","TTAACTTAATTATCAG",4,22.92,10.95,0.11,0.13,2.81,1.13,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTAACTTACCACAGTG",16,301.92,9.37,-1.47,0.03,2.9,1.08,0,"1 nonsynonymous","Y119W",1
"lib2","SARS-CoV-2","TTAACTTACCGCAGCT",5,123.84,10.35,-0.49,0.04,2.89,1.07,0,"1 nonsynonymous","S36P",1
"lib2","SARS-CoV-2","TTAACTTAGATGCCAG",2,88.27,9.24,-1.59,0.05,2.73,1.07,0,">1 nonsynonymous","S41P A145F Y175W",3
"lib2","SARS-CoV-2","TTAACTTAGTTATGAT",1,0.77,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R73V",1
"lib2","SARS-CoV-2","TTAACTTATAACGAAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTAACTTCAAATCTAT",15,3.81,NA,NA,NA,NA,NA,NA,"stop","L60M K128*",2
"lib2","SARS-CoV-2","TTAACTTGAAACCACG",2,11.89,10.54,-0.3,0.09,2.96,1.06,0,"1 nonsynonymous","I138Y",1
"lib2","SARS-CoV-2","TTAACTTGAGTTCAAA",4,42.88,6,-4.84,2,1.5,1.27,0.01,">1 nonsynonymous","T63V K87R F167R",3
"lib2","SARS-CoV-2","TTAACTTGGCCGAAAT",3,15.95,6,-4.84,2,3,1.34,0.01,">1 nonsynonymous","F99C Y119N",2
"lib2","SARS-CoV-2","TTAACTTGTCTATAAA",5,117.08,7.85,-2.99,0.26,1.5,1.07,0.02,">1 nonsynonymous","A14I N64A Y91Q G196V",4
"lib2","SARS-CoV-2","TTAACTTTTGGAGACA",4,18.98,10.83,0,0.07,2.98,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGAAAAGCCGGCG",5,49.28,10.25,-0.59,0.07,2.74,1.07,0,">1 nonsynonymous","F47M Y91L",2
"lib2","SARS-CoV-2","TTAAGAAAATACAGCC",2,3.07,NA,NA,NA,NA,NA,NA,"stop","W23* Y91H Q144S P149R E154I P191L",6
"lib2","SARS-CoV-2","TTAAGAAAGAATCAAG",3,51.46,10.91,0.08,0.06,3,1.02,0,"1 nonsynonymous","Q163H",1
"lib2","SARS-CoV-2","TTAAGAAATATAACCA",26,471.97,9.3,-1.54,0.04,2.92,1.09,0,"1 nonsynonymous","N157S",1
"lib2","SARS-CoV-2","TTAAGAAATCTCTAGC",4,130.23,10.12,-0.72,0.05,2.7,1.07,0,">1 nonsynonymous","I88L T201W",2
"lib2","SARS-CoV-2","TTAAGAAATTGGTAGA",11,143.99,10.78,-0.06,0.06,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGAACAAAAATCG",5,56.9,8.56,-2.27,0.2,1.69,1.11,0.02,">1 nonsynonymous","Y35S W106L",2
"lib2","SARS-CoV-2","TTAAGAACATGCACGA",4,42.94,10.8,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGAACCAAAACTG",4,0.17,NA,NA,NA,NA,NA,NA,"stop","T15* A33L R78T L125M A190T T201M",6
"lib2","SARS-CoV-2","TTAAGAACCAAGGAAT",1,20.76,10.25,-0.59,0.2,2.37,1.14,0.03,">1 nonsynonymous","C6R D34Q L60K",3
"lib2","SARS-CoV-2","TTAAGAACCTACATAA",8,29.98,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","A22N A89R N157S",3
"lib2","SARS-CoV-2","TTAAGAACCTACCCAA",3,34.85,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A81Q A89C K132I I142F",4
"lib2","SARS-CoV-2","TTAAGAACGCCAATGC",6,114.08,10.13,-0.7,0.06,2.68,1,0,">1 nonsynonymous","T3R S41P N64V V173N L188I",5
"lib2","SARS-CoV-2","TTAAGAACGTATTAAC",9,64.1,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F17R K26R G101W A145G P149L G172V",6
"lib2","SARS-CoV-2","TTAAGAACTTAGTCCA",1,19.51,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","V52R G86K L122R",3
"lib2","SARS-CoV-2","TTAAGAAGAAAACTGA",3,78.77,10.88,0.04,0.04,2.97,1.06,0,"1 nonsynonymous","T55R",1
"lib2","SARS-CoV-2","TTAAGAAGAATTCGCG",5,43.91,10.39,-0.44,0.06,2.84,1.07,0,"1 nonsynonymous","N13Y",1
"lib2","SARS-CoV-2","TTAAGAAGACGTGCTG",2,42.83,6.74,-4.09,0.31,1.5,1.15,0.01,">1 nonsynonymous","F8Q G146W",2
"lib2","SARS-CoV-2","TTAAGAAGAGTGATAT",2,7.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y F8Y W23C F70L L131I F167Q",6
"lib2","SARS-CoV-2","TTAAGAAGATCCTAAT",4,0.05,NA,NA,NA,NA,NA,NA,"stop","I28* A33Q Y93T S113K",4
"lib2","SARS-CoV-2","TTAAGAATAAAGCCCC",13,255.76,10.8,-0.04,0.05,2.92,1.09,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","TTAAGAATGAGGTGCT",3,10.32,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S19T R25I P54A I88M",4
"lib2","SARS-CoV-2","TTAAGAATGGCCTCAG",8,64.75,10.49,-0.34,0.06,3,1.01,0,">1 nonsynonymous","Y50W C61I G83M",3
"lib2","SARS-CoV-2","TTAAGAATTAATCACT",3,57.61,9.34,-1.49,0.1,2.36,1,0,">1 nonsynonymous","C6R E154L",2
"lib2","SARS-CoV-2","TTAAGAATTCTAAGTC",15,140.29,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","S113T C158L",2
"lib2","SARS-CoV-2","TTAAGACAAACACTGA",5,44.3,6.37,-4.46,0.67,1.5,1.25,0.03,">1 nonsynonymous","V11S S113C",2
"lib2","SARS-CoV-2","TTAAGACAAGATTTCA",7,50.56,6,-4.84,0.74,1.99,1.15,0.01,">1 nonsynonymous","E135C L162S",2
"lib2","SARS-CoV-2","TTAAGACAAGTTTAAA",8,60.07,6,-4.84,2,3,1.08,0,">1 nonsynonymous","N4V A33E P96I Y121I Y143V Q176L",6
"lib2","SARS-CoV-2","TTAAGACAATTGCATC",2,8.49,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","N13M Y121F G172R V181F",4
"lib2","SARS-CoV-2","TTAAGACAGAATAAAA",5,28.72,10.82,-0.02,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGACAGGCGGCCA",8,10.52,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D34L S41P C61P S113C E141T",5
"lib2","SARS-CoV-2","TTAAGACAGGTCCAAC",3,0,NA,NA,NA,NA,NA,NA,"stop","E186*",1
"lib2","SARS-CoV-2","TTAAGACCAGGCAAGC",4,2.08,NA,NA,NA,NA,NA,NA,"stop","N13K S113* P169Y",3
"lib2","SARS-CoV-2","TTAAGACCGAGTGGCA",10,12.15,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","K26P D34S A42P S113R N120Y T201H",6
"lib2","SARS-CoV-2","TTAAGACCTAATGGCG",3,0.75,NA,NA,NA,NA,NA,NA,"stop","C49R A105V N157S F160*",4
"lib2","SARS-CoV-2","TTAAGACTCATATCGT",4,119.68,10.49,-0.34,0.05,2.91,1.08,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TTAAGACTTCTACGAA",7,69.23,9.58,-1.25,0.03,2.91,1.09,0,">1 nonsynonymous","D97L Y119H",2
"lib2","SARS-CoV-2","TTAAGACTTGCAGACA",2,19.28,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V71H S113H V173A",3
"lib2","SARS-CoV-2","TTAAGACTTTGATTTA",2,8.37,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S19K N92Y",2
"lib2","SARS-CoV-2","TTAAGAGAACTTGGGA",3,133.33,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","W23K N30L T63N W106E Y121L T140I Y178K",7
"lib2","SARS-CoV-2","TTAAGAGACCACCCTG",16,241.82,10.82,-0.02,0.05,2.92,1.1,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","TTAAGAGACCATAATG",4,12.09,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I88K K198S",2
"lib2","SARS-CoV-2","TTAAGAGCTAACGCTT",4,81.03,9.12,-1.72,0.09,2.49,1.14,0,">1 nonsynonymous","C6I G174P",2
"lib2","SARS-CoV-2","TTAAGAGCTAGCAAAG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","Y39* S45R",2
"lib2","SARS-CoV-2","TTAAGAGGATGACAGA",6,30.28,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","F8K S41R D59H N157M F167H",5
"lib2","SARS-CoV-2","TTAAGAGTAAAACCAA",3,24.74,10.96,0.12,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGAGTTACTCATA",5,21.06,9.02,-1.81,0.23,2.45,1,0.02,">1 nonsynonymous","I2R L60W Y123I",3
"lib2","SARS-CoV-2","TTAAGATAAAGACACC",9,110.51,6.02,-4.82,0.53,1.5,1.13,0.01,">1 nonsynonymous","S29C R136A I142Q G174D",4
"lib2","SARS-CoV-2","TTAAGATAATATACAA",3,64.84,9.5,-1.34,0.08,2.37,1.08,0,"1 nonsynonymous","N107T",1
"lib2","SARS-CoV-2","TTAAGATATAAACAAT",1,1.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58I V181S",2
"lib2","SARS-CoV-2","TTAAGATGATAGAAAA",6,110.18,9.94,-0.9,0.09,2.63,1.04,0,">1 nonsynonymous","D90Y T100V P133S",3
"lib2","SARS-CoV-2","TTAAGATGGATCAGAT",2,16.68,10.86,0.02,0.07,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAAGATGGATGCTAT",4,15.01,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","A42L A89G R124M",3
"lib2","SARS-CoV-2","TTAAGATTCAACAAAT",3,60.66,9.95,-0.88,0.07,2.83,1.1,0,"1 nonsynonymous","Y121K",1
"lib2","SARS-CoV-2","TTAAGATTCAACAGGG",5,23.14,6,-4.84,1.8,3,1.05,0,">1 nonsynonymous","A33P C102K L187T",3
"lib2","SARS-CoV-2","TTAAGCAAAAAGCAGA",2,35.95,10.55,-0.29,0.04,3,1.01,0,">1 nonsynonymous","Y123S K199P",2
"lib2","SARS-CoV-2","TTAAGCAACACATATG",6,28.21,10.28,-0.56,0.08,2.24,1.08,0,">1 nonsynonymous","T55A K94S",2
"lib2","SARS-CoV-2","TTAAGCAAGACGTAAT",7,53.53,10.14,-0.7,0.06,2.64,1.09,0,">1 nonsynonymous","L5N L57A K128A",3
"lib2","SARS-CoV-2","TTAAGCAATAATATCA",2,36.31,8.98,-1.86,0.09,2.75,1,0,">1 nonsynonymous","F44V G74Q",2
"lib2","SARS-CoV-2","TTAAGCACGAAAAGTT",3,5.12,NA,NA,NA,NA,NA,NA,"stop","K114* Q144C",2
"lib2","SARS-CoV-2","TTAAGCAGAGGTCAAA",4,145.7,10.35,-0.49,0.05,2.94,1,0,">1 nonsynonymous","T46S F62N",2
"lib2","SARS-CoV-2","TTAAGCAGCATATAAG",6,10.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N13H V32G E76A A105D N130C",5
"lib2","SARS-CoV-2","TTAAGCAGGGGAAAAG",5,48.92,7.66,-3.18,0.33,1.5,1.11,0.04,">1 nonsynonymous","L38I A105L P149L",3
"lib2","SARS-CoV-2","TTAAGCATATAATACA",4,11.63,6.64,-4.19,0.86,2.42,1.15,0.01,">1 nonsynonymous","E76V V182Y A190N",3
"lib2","SARS-CoV-2","TTAAGCATATAATCCC",1,17.3,10.18,-0.65,0.06,2.76,1.18,0,">1 nonsynonymous","A89N P197S S200V",3
"lib2","SARS-CoV-2","TTAAGCATCACACTAT",7,198.92,10.81,-0.03,0.05,2.91,1.1,0,"1 nonsynonymous","N151E",1
"lib2","SARS-CoV-2","TTAAGCCAATTTACAA",3,1.53,NA,NA,NA,NA,NA,NA,"stop","G9* K87S S139F E154W",4
"lib2","SARS-CoV-2","TTAAGCCACTATCAAA",2,20.93,10.86,0.02,0.05,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGCCAGGAGAATG",8,120.6,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","S36W K48L V77W N118V",4
"lib2","SARS-CoV-2","TTAAGCCATATACATT",2,6.78,6.82,-4.01,0.88,1.5,1.07,0.06,">1 nonsynonymous","T63N L95F E141M P169M",4
"lib2","SARS-CoV-2","TTAAGCCATGGCTATC",2,58.24,11,0.17,0.07,2.95,1.04,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","TTAAGCCCCTGCACTG",9,50.49,10.69,-0.15,0.03,2.93,1.06,0,">1 nonsynonymous","T100R N130S S139N",3
"lib2","SARS-CoV-2","TTAAGCCTCCACCTAA",1,5.9,10.75,-0.09,0.02,3,1,0,"1 nonsynonymous","Y39A",1
"lib2","SARS-CoV-2","TTAAGCGAAATACAAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGCGAACAATAAA",3,0,NA,NA,NA,NA,NA,NA,"stop","D90* G117L Q144R",3
"lib2","SARS-CoV-2","TTAAGCGGTTCAATGC",6,122.88,9.05,-1.78,0.06,1.93,1.08,0,">1 nonsynonymous","K87G F99L A192N",3
"lib2","SARS-CoV-2","TTAAGCGTACCAGATA",7,2.73,NA,NA,NA,NA,NA,NA,"stop","Y50M D59* D75N L125Q P149S Y159L",6
"lib2","SARS-CoV-2","TTAAGCGTGTCATCAG",3,14.32,9.61,-1.22,0.17,1.93,1,0.01,">1 nonsynonymous","A18L P133G",2
"lib2","SARS-CoV-2","TTAAGCTATTTTAGCC",10,113.79,9.06,-1.78,0.1,1.78,1.13,0,">1 nonsynonymous","C49I Q144A",2
"lib2","SARS-CoV-2","TTAAGCTCATCCTTTA",14,268.58,10.65,-0.18,0.02,2.93,1.06,0,">1 nonsynonymous","E10V T55D",2
"lib2","SARS-CoV-2","TTAAGCTCGATTATAA",4,95.46,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C6F G172S",2
"lib2","SARS-CoV-2","TTAAGCTCGCTACTAT",8,238.87,8.39,-2.44,0.15,1.5,1.04,0.01,">1 nonsynonymous","D90L N120L Y178S",3
"lib2","SARS-CoV-2","TTAAGGAAAACATACA",7,63.18,6.06,-4.78,0.65,1.5,1.19,0.01,">1 nonsynonymous","N40C W106L S147A",3
"lib2","SARS-CoV-2","TTAAGGAATAAAATAC",7,42.62,10.15,-0.68,0.11,2.5,1.01,0,"1 nonsynonymous","W106S",1
"lib2","SARS-CoV-2","TTAAGGAATGATTTAG",5,107.99,10.84,0.01,0.06,2.96,1.06,0,">1 nonsynonymous","S129E T201D",2
"lib2","SARS-CoV-2","TTAAGGACATATCCAT",5,13.22,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","T100G E135L",2
"lib2","SARS-CoV-2","TTAAGGAGAAAAGGGG",3,0.8,NA,NA,NA,NA,NA,NA,"stop","V77K D98L S139W T201*",4
"lib2","SARS-CoV-2","TTAAGGAGATGATAAG",4,3.02,NA,NA,NA,NA,NA,NA,"stop","F99*",1
"lib2","SARS-CoV-2","TTAAGGAGCCCCCAAG",2,12.34,10.24,-0.59,0.23,2.07,1,0.06,">1 nonsynonymous","L5I P7V K198F",3
"lib2","SARS-CoV-2","TTAAGGAGTTAACAGA",3,13,10.09,-0.75,0.08,2.86,1.05,0,"1 nonsynonymous","E10F",1
"lib2","SARS-CoV-2","TTAAGGATTACGCTTT",5,1.81,NA,NA,NA,NA,NA,NA,"stop","C49R A89Y L95A T140* P191S",5
"lib2","SARS-CoV-2","TTAAGGCAGCTTGGAG",11,69.5,6,-4.84,2,3,1.15,0,">1 nonsynonymous","I2K S53F R127E R136C G196R",5
"lib2","SARS-CoV-2","TTAAGGCATGTAAATC",3,81.44,10.67,-0.17,0.02,2.97,1.04,0,"1 nonsynonymous","F185L",1
"lib2","SARS-CoV-2","TTAAGGCATGTCCGCT",14,268.37,10.34,-0.5,0.03,2.86,1.06,0,"1 nonsynonymous","P161A",1
"lib2","SARS-CoV-2","TTAAGGCGAATATTTA",4,87.87,9.53,-1.3,0.04,2.96,1.05,0,">1 nonsynonymous","R73L K87I P197R",3
"lib2","SARS-CoV-2","TTAAGGCGCAGCTTCA",4,46.18,8.77,-2.07,0.12,1.5,1.01,0.01,">1 nonsynonymous","I2T L38S W106M",3
"lib2","SARS-CoV-2","TTAAGGCTAAAAGGGT",2,0.05,NA,NA,NA,NA,NA,NA,"stop","A22* F70N P96T F185I",4
"lib2","SARS-CoV-2","TTAAGGCTGTTCTATG",5,105.41,10.88,0.04,0.04,2.95,1.07,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","TTAAGGGCAACACAAC",5,735.15,10.75,-0.09,0.03,2.99,1.03,0,"1 nonsynonymous","T140D",1
"lib2","SARS-CoV-2","TTAAGGGCTCGTTGTG",1,8.36,9.31,-1.53,0.17,1.89,1.04,0.01,">1 nonsynonymous","N58A F99H S200K",3
"lib2","SARS-CoV-2","TTAAGGGGTGTTCGGT",2,0.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L K94A",2
"lib2","SARS-CoV-2","TTAAGGTAACCCGCAA",2,30.47,10.3,-0.53,0.15,2.34,1,0.01,">1 nonsynonymous","L5F I104T N120S V153L",4
"lib2","SARS-CoV-2","TTAAGGTAAGCCACGA",1,8.6,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","I28W T85R P133G Y175V V182G",5
"lib2","SARS-CoV-2","TTAAGGTACAGCTATC",6,40.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D68G Q163E",2
"lib2","SARS-CoV-2","TTAAGGTCCGACGTGA",4,106.43,9.37,-1.46,0.08,2.47,1.03,0,">1 nonsynonymous","A42I K48Y Y121L T148R",4
"lib2","SARS-CoV-2","TTAAGGTCGACCATAC",3,143.36,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10S N92F K128P G146L Y178E",5
"lib2","SARS-CoV-2","TTAAGGTCGTTGTTAG",7,181.35,10.08,-0.76,0.06,2.83,1.03,0,">1 nonsynonymous","G152V P191H G196E T201G",4
"lib2","SARS-CoV-2","TTAAGGTGCCATGACA",6,27.38,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","P7T R16T I104S R179C T201G",5
"lib2","SARS-CoV-2","TTAAGGTTAGAAAAAC",2,14.42,9.42,-1.42,0.08,2.74,1.16,0,">1 nonsynonymous","F12I K87D",2
"lib2","SARS-CoV-2","TTAAGGTTATAGTTAA",2,45.28,10.58,-0.26,0.03,2.97,1.05,0,">1 nonsynonymous","E10D L60S",2
"lib2","SARS-CoV-2","TTAAGGTTATTGCTAC",7,103.71,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V32Y F44C T100P K114V G146F V173S",6
"lib2","SARS-CoV-2","TTAAGGTTGGATGTCA",5,50.73,8.04,-2.8,0.15,1.58,1.09,0.01,">1 nonsynonymous","G9S K132P N157R",3
"lib2","SARS-CoV-2","TTAAGGTTTCTTTGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","D59*",1
"lib2","SARS-CoV-2","TTAAGGTTTGTAAAAG",5,186.21,8.63,-2.2,0.08,3,1.06,0,">1 nonsynonymous","T170I P197K",2
"lib2","SARS-CoV-2","TTAAGGTTTTAGTAGT",3,50.5,10.45,-0.38,0.06,2.74,1.07,0,">1 nonsynonymous","A105T A192W",2
"lib2","SARS-CoV-2","TTAAGTAAAAGAATAT",10,0.67,NA,NA,NA,NA,NA,NA,"stop","Q144* T170H",2
"lib2","SARS-CoV-2","TTAAGTAAACACTAGG",4,235.76,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","I28R K56V S113T T148F",4
"lib2","SARS-CoV-2","TTAAGTAAACATAACT",1,4.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48M Y91I I104K",3
"lib2","SARS-CoV-2","TTAAGTAACCCGTACC",3,25.1,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y121R P177S",2
"lib2","SARS-CoV-2","TTAAGTAACTTCGTCG",7,82.67,10.13,-0.71,0.03,2.93,1.03,0,">1 nonsynonymous","I2E V11F F62P",3
"lib2","SARS-CoV-2","TTAAGTACACGGAATT",6,46.72,8.72,-2.12,0.18,1.59,1.12,0.01,">1 nonsynonymous","I2W N64Q I88C",3
"lib2","SARS-CoV-2","TTAAGTACCGACATAT",1,2.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L C102G",2
"lib2","SARS-CoV-2","TTAAGTACCTGGCCAA",2,1.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94M D98L Y123R E154T",4
"lib2","SARS-CoV-2","TTAAGTACGATAATAG",4,23.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26G N40M F62M E154G L187R K199I",6
"lib2","SARS-CoV-2","TTAAGTACTTATCTGT",7,161.99,10.55,-0.28,0.02,2.95,1.05,0,">1 nonsynonymous","S41L L122W",2
"lib2","SARS-CoV-2","TTAAGTAGAATGCACT",2,224.9,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37P G83P D90T D112L Y119V",5
"lib2","SARS-CoV-2","TTAAGTAGCTGCAATC",10,225.59,10.84,0.01,0.06,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGTAGGTACCCTG",9,183.87,10.85,0.02,0.05,2.92,1.09,0,">1 nonsynonymous","R16H Y21F",2
"lib2","SARS-CoV-2","TTAAGTAGTATATATA",7,106.21,10.83,-0.01,0.05,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAAGTAGTTGTAACA",11,102.9,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C102W F134E S200P",3
"lib2","SARS-CoV-2","TTAAGTAGTTTCCCAC",3,24.89,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","N13Y N64L Y93F A105R D137P",5
"lib2","SARS-CoV-2","TTAAGTCAAAGAATGC",2,40.71,7.81,-3.02,0.46,1.5,1,0.06,">1 nonsynonymous","G9V S113M Y121L",3
"lib2","SARS-CoV-2","TTAAGTCAATTTATAA",4,30.37,10.86,0.02,0.06,2.8,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGTCCATTAGAAA",3,1.9,NA,NA,NA,NA,NA,NA,"stop","D34S S113G Y119*",3
"lib2","SARS-CoV-2","TTAAGTCCGCCTACAA",4,55.12,10.09,-0.74,0.08,2.64,1.09,0,">1 nonsynonymous","R136A A190R",2
"lib2","SARS-CoV-2","TTAAGTCGTTCTTAAA",2,35.38,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","R25I G83N N92K F134L",4
"lib2","SARS-CoV-2","TTAAGTCTCACCTCGG",2,17.74,6,-4.84,2,3,1.09,0.02,">1 nonsynonymous","E10G V37S A42R K56W Y93T W106E",6
"lib2","SARS-CoV-2","TTAAGTGAGGGATTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","P54R N92I W106Y D137G Y178*",5
"lib2","SARS-CoV-2","TTAAGTGATGTCCAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143M G166T",2
"lib2","SARS-CoV-2","TTAAGTGCACAGGGTG",4,0,NA,NA,NA,NA,NA,NA,"stop","F44* S69F S108F G146P",4
"lib2","SARS-CoV-2","TTAAGTGCCCAAACAG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","F12N Y39* V71A Y123R G155*",5
"lib2","SARS-CoV-2","TTAAGTGGGAAGCAGT",5,1.25,NA,NA,NA,NA,NA,NA,"stop","N24* V71K Q84L L95D V173F",5
"lib2","SARS-CoV-2","TTAAGTGTATGCGATG",5,37.26,10.86,0.02,0.05,2.99,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGTGTATTAAGGA",5,33.11,10.79,-0.04,0.1,2.84,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGTGTATTGAGGG",2,35.64,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23C G51S K56F P161Y",4
"lib2","SARS-CoV-2","TTAAGTTAAAGGGAGT",12,142.3,10.27,-0.56,0.04,2.86,1.08,0,">1 nonsynonymous","Y123V G166S",2
"lib2","SARS-CoV-2","TTAAGTTAACTCACAC",2,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3I N30L C49S K56R V103S",5
"lib2","SARS-CoV-2","TTAAGTTAATTACTCA",8,75.15,10.1,-0.74,0.06,2.54,1.07,0,">1 nonsynonymous","D59V L122Y E135S",3
"lib2","SARS-CoV-2","TTAAGTTACCGATTTG",6,0.17,NA,NA,NA,NA,NA,NA,"stop","V11R V52* D98S",3
"lib2","SARS-CoV-2","TTAAGTTACTATGGAG",3,22,8.59,-2.24,0.13,3,1.04,0.01,">1 nonsynonymous","V37I K114M Q144N G166D",4
"lib2","SARS-CoV-2","TTAAGTTATCATAACT",1,20.47,10.59,-0.25,0.08,2.88,1.12,0,"1 nonsynonymous","S41F",1
"lib2","SARS-CoV-2","TTAAGTTCCCCTACTG",2,29.35,10.72,-0.11,0.07,2.8,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAAGTTCGCCCCTAG",4,0.22,NA,NA,NA,NA,NA,NA,"stop","T63N N107V V181*",3
"lib2","SARS-CoV-2","TTAAGTTCTATCCGTT",5,72.87,9.73,-1.11,0.08,2.31,1.09,0,"1 nonsynonymous","E76Y",1
"lib2","SARS-CoV-2","TTAAGTTGTACAGCGA",23,403.53,10.08,-0.76,0.04,2.89,1.04,0,">1 nonsynonymous","I2F Q84K N118A",3
"lib2","SARS-CoV-2","TTAAGTTGTCGAGTAA",6,108.07,8.81,-2.03,0.14,1.5,1.06,0.01,">1 nonsynonymous","I2D F12D I104L",3
"lib2","SARS-CoV-2","TTAATAAAAACTTAGG",8,52.26,10.84,0.01,0.04,2.91,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAATAAAAAGTGATA",9,29.57,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","S36C Y119L P161G",3
"lib2","SARS-CoV-2","TTAATAAAAATTGATT",1,24.91,9.94,-0.9,0.09,2.87,1.08,0,">1 nonsynonymous","R73K K128N F156T",3
"lib2","SARS-CoV-2","TTAATAAACGGAGAGT",2,16.85,6.57,-4.26,0.53,1.5,1.12,0.04,">1 nonsynonymous","V71R K87G G116I",3
"lib2","SARS-CoV-2","TTAATAAACTTTAAAA",1,0.73,NA,NA,NA,NA,NA,NA,"stop","T46N P82A G83C D90W Y121L Y143L P169* K199N",8
"lib2","SARS-CoV-2","TTAATAAAGTACCCTA",2,63.31,9.04,-1.79,0.09,2.6,1.05,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","TTAATAAATGTTGAAT",5,210.28,9.51,-1.32,0.05,1.99,1.08,0,">1 nonsynonymous","F99V K114I K198N",3
"lib2","SARS-CoV-2","TTAATAACATCCAAAA",4,117.29,10.53,-0.31,0.04,2.93,1.07,0,"1 nonsynonymous","F134E",1
"lib2","SARS-CoV-2","TTAATAACATTGAATC",5,1.66,NA,NA,NA,NA,NA,NA,"stop","V37E F47P D112* S147M V194L",5
"lib2","SARS-CoV-2","TTAATAACGAAGTATG",1,30.57,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L95T S108L I138N N171A",4
"lib2","SARS-CoV-2","TTAATAACGTTACAAC",1,16.52,9.49,-1.34,0.12,2.35,1,0.01,">1 nonsynonymous","N120S Y143H L162M",3
"lib2","SARS-CoV-2","TTAATAACTAAGAATT",6,55.84,8.33,-2.51,0.09,2.4,1.05,0,">1 nonsynonymous","I2F R16M A42I Y143T",4
"lib2","SARS-CoV-2","TTAATAAGAAGCTAGA",9,34.61,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","A42W G51K G116N D137L",4
"lib2","SARS-CoV-2","TTAATAAGAATTGACC",10,170.47,10.65,-0.19,0.02,2.93,1.06,0,">1 nonsynonymous","K48A K199N",2
"lib2","SARS-CoV-2","TTAATAAGCATTCCGA",9,43.17,6,-4.84,2,3,1.09,0,">1 nonsynonymous","V103A P161L G174W",3
"lib2","SARS-CoV-2","TTAATAAGCGGGAGAT",2,0.21,NA,NA,NA,NA,NA,NA,"stop","T3M E10Y K48F I80M F99E W106* I142W",7
"lib2","SARS-CoV-2","TTAATAAGCTTATCAG",4,64.47,9.87,-0.97,0.11,2.54,1.05,0,">1 nonsynonymous","A33R F44V",2
"lib2","SARS-CoV-2","TTAATAAGTGAAAGGA",8,30.84,6,-4.84,1.47,1.5,1.15,0.01,">1 nonsynonymous","N58Y P82W Q84R T140I",4
"lib2","SARS-CoV-2","TTAATAAGTTGTAGTT",5,3.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14Y C49N V77M L125V Y178K F185S",6
"lib2","SARS-CoV-2","TTAATAATACAAGACT",4,0.21,NA,NA,NA,NA,NA,NA,"stop","N40K L60V R73* R136* S200Q",5
"lib2","SARS-CoV-2","TTAATAATAGTTTGAC",1,20.02,10.81,-0.03,0.06,2.89,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAATAATCAAATTAC",2,59.49,10.55,-0.29,0.03,2.97,1.01,0,">1 nonsynonymous","N4P S41K",2
"lib2","SARS-CoV-2","TTAATAATCCAATCAC",5,42.64,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","F70N",1
"lib2","SARS-CoV-2","TTAATAATCCCCTGAA",3,30.33,10.87,0.04,0.09,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAATAATGTAATAAT",8,51.06,6.39,-4.45,0.62,1.5,1.2,0.04,">1 nonsynonymous","A81L K128L T148R F160C V173F",5
"lib2","SARS-CoV-2","TTAATAATGTTACACA",8,78.27,10.43,-0.41,0.04,2.88,1.07,0,">1 nonsynonymous","E141I S184A",2
"lib2","SARS-CoV-2","TTAATACAACACATCT",13,5.39,NA,NA,NA,NA,NA,NA,"stop","I88* V115A Y121E S164M Q176*",5
"lib2","SARS-CoV-2","TTAATACACACCCCCT",3,30.14,7.47,-3.36,0.31,1.73,1.27,0.03,">1 nonsynonymous","V32R A81S F99L V173E",4
"lib2","SARS-CoV-2","TTAATACACTAGATAT",4,32.25,9.7,-1.13,0.12,2.14,1.06,0.01,">1 nonsynonymous","K56V G83I",2
"lib2","SARS-CoV-2","TTAATACACTGCTATT",3,81.53,9.58,-1.25,0.05,2.85,1.08,0,">1 nonsynonymous","G74A S184I",2
"lib2","SARS-CoV-2","TTAATACATTTACGAA",4,90.33,10.81,-0.03,0.03,2.91,1.11,0,"1 nonsynonymous","I2A",1
"lib2","SARS-CoV-2","TTAATACCACCGTAAG",6,32.5,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","G86R Y121G E154P V180S",4
"lib2","SARS-CoV-2","TTAATACCAGCTACTA",7,199.09,10.26,-0.58,0.05,2.82,1.09,0,">1 nonsynonymous","K26S S129I",2
"lib2","SARS-CoV-2","TTAATACCGGAGAAAG",6,216,9.72,-1.11,0.03,2.87,1.06,0,">1 nonsynonymous","N64R D97G E154L",3
"lib2","SARS-CoV-2","TTAATACCTGAGGCAA",18,153.66,10.35,-0.48,0.03,2.88,1.05,0,">1 nonsynonymous","K56E K128G F134C",3
"lib2","SARS-CoV-2","TTAATACGCACCCCAA",21,10.2,NA,NA,NA,NA,NA,NA,"stop","V37* G155R",2
"lib2","SARS-CoV-2","TTAATACGCCAGTCCT",9,119.75,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","F8R F99W A105R Q176H",4
"lib2","SARS-CoV-2","TTAATACGGGTTGAAT",3,26.17,8.01,-2.82,0.24,1.5,1.07,0.02,">1 nonsynonymous","N4Y N107T E141V",3
"lib2","SARS-CoV-2","TTAATACGTCGATATT",2,33.17,10.59,-0.24,0.07,2.97,1.04,0,">1 nonsynonymous","N4R S129C Y175F",3
"lib2","SARS-CoV-2","TTAATACTAGATACGG",11,46.55,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C6G T55V V65Y K87S A105P N118L",6
"lib2","SARS-CoV-2","TTAATACTATCTTGCC",10,58.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C49R G166H",2
"lib2","SARS-CoV-2","TTAATACTCAAGAAAT",3,48.26,6.05,-4.79,1.12,1.5,1.16,0.02,">1 nonsynonymous","F8Y K128T E154V Y165R",4
"lib2","SARS-CoV-2","TTAATACTTACTGTAC",14,219.05,10.24,-0.59,0.04,2.84,1.03,0,">1 nonsynonymous","S41P V103I",2
"lib2","SARS-CoV-2","TTAATAGACCGCTTCC",7,25.36,6.11,-4.73,0.76,2.2,1.17,0.01,">1 nonsynonymous","R25F K87Q",2
"lib2","SARS-CoV-2","TTAATAGATAAATAGT",7,235.04,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y39L C49S A89C F99C Q144C C150R P161M P177T K198F",9
"lib2","SARS-CoV-2","TTAATAGATTACAAAT",1,4.64,NA,NA,NA,NA,NA,NA,"stop","N120* R124K I142S",3
"lib2","SARS-CoV-2","TTAATAGCAACAAAAG",8,164.69,10.05,-0.79,0.04,2.72,1.07,0,">1 nonsynonymous","Y35A D90A",2
"lib2","SARS-CoV-2","TTAATAGCAAGATAAG",9,3.64,NA,NA,NA,NA,NA,NA,"stop","T15Y D34L F44* Y93F C158N V180M",6
"lib2","SARS-CoV-2","TTAATAGCCAACGTAT",3,45.63,10.91,0.07,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATAGCGAGATGTC",1,10.87,6.05,-4.79,0.74,3,1.08,0.01,"1 nonsynonymous","F167V",1
"lib2","SARS-CoV-2","TTAATAGGTGATCATG",5,63.58,10.87,0.04,0.06,2.9,1.09,0,"1 nonsynonymous","D97P",1
"lib2","SARS-CoV-2","TTAATAGTAATCTTCA",1,10.12,6.11,-4.73,2,1.5,1.36,0.07,">1 nonsynonymous","L57G D97V Q144A L162R",4
"lib2","SARS-CoV-2","TTAATAGTACAGACAA",2,8.73,6.13,-4.7,1.86,3,1.05,0.01,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","TTAATAGTCTAGCTAA",1,15.15,10.82,-0.01,0.08,2.97,1.06,0,"1 nonsynonymous","S200T",1
"lib2","SARS-CoV-2","TTAATAGTTAAACTCA",4,94.51,10.43,-0.4,0.05,2.95,1.01,0,">1 nonsynonymous","L5P K26N I28L G51R",4
"lib2","SARS-CoV-2","TTAATATAAACGATTT",2,0,NA,NA,NA,NA,NA,NA,"stop","P82F K94V R136S G166* K199N",5
"lib2","SARS-CoV-2","TTAATATAATCTATCA",5,117.45,9.52,-1.32,0.06,2.11,1.03,0,">1 nonsynonymous","P7A G83W G152T",3
"lib2","SARS-CoV-2","TTAATATAATTGTTCG",1,5.37,8.34,-2.5,0.34,1.6,1.16,0.02,">1 nonsynonymous","G86K T201M",2
"lib2","SARS-CoV-2","TTAATATACAGGCTTA",2,22.49,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5G R124V",2
"lib2","SARS-CoV-2","TTAATATACTCACACA",1,12.21,10.93,0.09,0.07,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATATAGACCAATA",3,52.8,6,-4.84,1.5,3,1.17,0,">1 nonsynonymous","Y50F T140P F167S",3
"lib2","SARS-CoV-2","TTAATATAGCCACGGT",4,95.5,10.85,0.01,0.05,3,1.01,0,"1 nonsynonymous","I138S",1
"lib2","SARS-CoV-2","TTAATATATTGTCACA",6,0.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C K94A",2
"lib2","SARS-CoV-2","TTAATATCCAATACAC",2,32.91,10.25,-0.58,0.1,2.69,1.11,0,">1 nonsynonymous","E76T L122S",2
"lib2","SARS-CoV-2","TTAATATCCATTATCA",1,17.01,8.53,-2.31,0.23,1.5,1,0.02,">1 nonsynonymous","N4L W106S T201M",3
"lib2","SARS-CoV-2","TTAATATCTTTAAGAA",7,37.48,10.02,-0.82,0.13,2.54,1.08,0.01,"1 nonsynonymous","V11C",1
"lib2","SARS-CoV-2","TTAATATGCTTAAATT",4,18.92,10.8,-0.03,0.09,2.76,1.24,0,"1 nonsynonymous","S200C",1
"lib2","SARS-CoV-2","TTAATATTCAGTGACG",15,220.43,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y39S F167K",2
"lib2","SARS-CoV-2","TTAATCAAAATCTCTA",2,6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8R L38W C49N T55G",4
"lib2","SARS-CoV-2","TTAATCAACAGGTTAA",9,160.91,8.85,-1.99,0.09,2.89,1.09,0,">1 nonsynonymous","G117C G196W",2
"lib2","SARS-CoV-2","TTAATCAAGCCTCCAA",11,33.71,7.62,-3.22,0.37,1.5,1.04,0.04,">1 nonsynonymous","A33N S69H G86F",3
"lib2","SARS-CoV-2","TTAATCAATAGTCCAC",2,27.02,7.55,-3.29,0.32,1.5,1.09,0.04,">1 nonsynonymous","G146V Q168V",2
"lib2","SARS-CoV-2","TTAATCAATCTACCTC",2,80.87,10.68,-0.16,0.03,2.97,1.04,0,">1 nonsynonymous","N1D I28M Y178N P191H",4
"lib2","SARS-CoV-2","TTAATCAATTAGAGTC",7,295.38,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","G51V G86T N120T Y178K",4
"lib2","SARS-CoV-2","TTAATCACAAAATGTG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T100H C150I E154W R179W",4
"lib2","SARS-CoV-2","TTAATCAGCATTTCTA",6,3.06,NA,NA,NA,NA,NA,NA,"stop","L5* Y93S T100R G146A G172R",5
"lib2","SARS-CoV-2","TTAATCAGCTCCCTAA",7,39.99,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F134L G146P S200H",3
"lib2","SARS-CoV-2","TTAATCAGGAAATGGT",4,69.81,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V11H R27S A67P F160L",4
"lib2","SARS-CoV-2","TTAATCAGGCCATCCG",1,24.03,6,-4.84,2,1.5,1.23,0.08,">1 nonsynonymous","D68G D75A D112P F167L",4
"lib2","SARS-CoV-2","TTAATCAGTGTGCTAG",1,11.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","R16I L57E W106T",3
"lib2","SARS-CoV-2","TTAATCATACCACCTC",7,159.45,8.49,-2.35,0.07,2.81,1.06,0,">1 nonsynonymous","Y66L D90E Y119L F160Y",4
"lib2","SARS-CoV-2","TTAATCATAGGAAATG",10,105.77,8.48,-2.35,0.28,1.5,1,0.03,">1 nonsynonymous","N40Y V103I R136N",3
"lib2","SARS-CoV-2","TTAATCATGGACATAG",1,18.74,6.23,-4.61,0.83,1.5,1.13,0.04,">1 nonsynonymous","C6K Y35N Y159A",3
"lib2","SARS-CoV-2","TTAATCATGTCCCGGA",3,0.46,NA,NA,NA,NA,NA,NA,"stop","W106Y E135W Q163* T170Y P197T",5
"lib2","SARS-CoV-2","TTAATCATTTATCTAT",4,30.58,9.99,-0.84,0.2,2.15,1.18,0.02,">1 nonsynonymous","L5D A42L Y91Q",3
"lib2","SARS-CoV-2","TTAATCCAAAAACCTA",5,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5Q G101C G166M",3
"lib2","SARS-CoV-2","TTAATCCACGTCTGCT",3,96.94,8.43,-2.41,0.11,2.41,1.12,0,">1 nonsynonymous","T100S Y119S V180C",3
"lib2","SARS-CoV-2","TTAATCCCGGGAATAA",3,44.88,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R16K D112W Y143M Q168K",4
"lib2","SARS-CoV-2","TTAATCCCGTACCACG",1,52.7,10.8,-0.04,0.09,2.75,1.23,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATCCCTGGTTACA",7,106.01,8.13,-2.71,0.13,2.21,1.05,0.01,">1 nonsynonymous","T100V Y165E",2
"lib2","SARS-CoV-2","TTAATCCTTTCATCAT",1,14.1,6,-4.84,0.89,3,1.08,0.01,">1 nonsynonymous","G172R T201S",2
"lib2","SARS-CoV-2","TTAATCGAAAGATTAG",6,138.1,9.23,-1.61,0.06,2.69,1.06,0,">1 nonsynonymous","K94A K128T G152D G174E",4
"lib2","SARS-CoV-2","TTAATCGAACTAAACA",10,73.71,10.78,-0.05,0.05,2.98,1,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","TTAATCGCAGCCCAAA",6,132.95,10.82,-0.02,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATCGCATGATGTG",3,40.82,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N4C E10N T100S W106P",4
"lib2","SARS-CoV-2","TTAATCGCTAAAAGCT",4,27.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31F Y50Q L57Q E135S",4
"lib2","SARS-CoV-2","TTAATCGCTTCTAGGT",2,20.83,10.45,-0.39,0.1,2.76,1.07,0.01,">1 nonsynonymous","A18T D98S",2
"lib2","SARS-CoV-2","TTAATCGCTTTCGCAA",11,156.2,10.68,-0.16,0.03,2.94,1.06,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","TTAATCGGAATATTTG",5,22.1,10.49,-0.34,0.09,2.89,1.13,0,">1 nonsynonymous","N120K G155T",2
"lib2","SARS-CoV-2","TTAATCGGTACGGGCA",1,27.46,10.7,-0.13,0.07,2.79,1.19,0,"1 nonsynonymous","S184K",1
"lib2","SARS-CoV-2","TTAATCGTAACTGGTG",6,22.82,8.45,-2.38,0.21,1.73,1.09,0.02,">1 nonsynonymous","N1C S41I K94N G174W",4
"lib2","SARS-CoV-2","TTAATCGTAGTTTAGT",2,15.54,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","W106V P149L P161L",3
"lib2","SARS-CoV-2","TTAATCGTCCATATTT",1,3.59,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TTAATCGTCCGACAAC",2,39.34,6,-4.84,2,3,1.11,0,">1 nonsynonymous","K94Q N157W",2
"lib2","SARS-CoV-2","TTAATCGTGTTATAAA",5,49.54,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N1T F12P G146F S184V",4
"lib2","SARS-CoV-2","TTAATCGTTACAATCT",5,124.97,10.01,-0.82,0.05,2.88,1.09,0,">1 nonsynonymous","I2H F126C T140K",3
"lib2","SARS-CoV-2","TTAATCTAAATAATTA",6,151.13,10.2,-0.63,0.06,2.72,1,0,">1 nonsynonymous","N40E S53G S129R P149Y",4
"lib2","SARS-CoV-2","TTAATCTATCGTCAAA",3,52.99,9.04,-1.79,0.08,2.91,1.11,0,">1 nonsynonymous","S43H G155N T170F",3
"lib2","SARS-CoV-2","TTAATCTCAAAATTCG",4,37.23,8.02,-2.81,0.2,1.5,1.14,0.01,">1 nonsynonymous","G9T F17Y P96Q",3
"lib2","SARS-CoV-2","TTAATCTCATAGCATG",5,0.23,NA,NA,NA,NA,NA,NA,"stop","N24L N30E Y121*",3
"lib2","SARS-CoV-2","TTAATCTCGAAACGAG",3,30.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F8I N13C S41R T46Y K56R A89G D97N E141S E154Y",9
"lib2","SARS-CoV-2","TTAATCTCGAACTATA",6,42.02,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","P7T Y91S L122G G146Q",4
"lib2","SARS-CoV-2","TTAATCTCTTCCCCAA",7,134.79,10.78,-0.06,0.04,2.96,1.05,0,"1 nonsynonymous","N4H",1
"lib2","SARS-CoV-2","TTAATCTGACAAATTG",3,58.67,6.57,-4.26,0.27,1.5,1.14,0.01,"1 nonsynonymous","L131E",1
"lib2","SARS-CoV-2","TTAATCTGACCAGAAT",2,22.43,8.46,-2.37,0.26,1.52,1.09,0.03,">1 nonsynonymous","Y66W D75K N107V Q168R",4
"lib2","SARS-CoV-2","TTAATCTGAGACAGAA",5,0,NA,NA,NA,NA,NA,NA,"stop","F47* P149L",2
"lib2","SARS-CoV-2","TTAATCTGGTCGGTTG",3,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51T Q84R P96N S184R",4
"lib2","SARS-CoV-2","TTAATCTTACATAATT",2,7.1,8.04,-2.79,1.34,1.82,1.03,0.04,">1 nonsynonymous","E10G C49G W106I P197Q",4
"lib2","SARS-CoV-2","TTAATCTTACCTACGG",10,134.19,10.86,0.02,0.03,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATCTTCGAAGAGG",4,49.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9N Y35C P82T",3
"lib2","SARS-CoV-2","TTAATCTTGCTTCAGG",1,53.66,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y93P P149N F167G",3
"lib2","SARS-CoV-2","TTAATCTTTCTAAAGC",1,19.58,9.04,-1.8,0.17,1.95,1.2,0.01,">1 nonsynonymous","R27L V52W F62Q L125F",4
"lib2","SARS-CoV-2","TTAATGAAAAATTACT",1,24.63,6,-4.84,1.63,1.5,1.14,0.03,">1 nonsynonymous","E10R R124C N130T Y165Q",4
"lib2","SARS-CoV-2","TTAATGAAATGTTATG",1,11.76,6.04,-4.8,0.92,1.5,1.06,0.01,">1 nonsynonymous","V11S S36Y C61T N107M C150E",5
"lib2","SARS-CoV-2","TTAATGAACACGGGCC",4,8.89,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S41G G101M F156L",3
"lib2","SARS-CoV-2","TTAATGAACACTAAAA",8,3.64,NA,NA,NA,NA,NA,NA,"stop","C6L F99*",2
"lib2","SARS-CoV-2","TTAATGAACCGATACT",2,23.24,7.71,-3.13,0.19,1.84,1.11,0.01,">1 nonsynonymous","F47L L60E Y123N S139T",4
"lib2","SARS-CoV-2","TTAATGAACCGCGACC",4,14.24,10.94,0.11,0.08,3,1,0,">1 nonsynonymous","D98E N130A",2
"lib2","SARS-CoV-2","TTAATGAAGTTAGTAA",5,35.67,9.6,-1.24,0.14,1.67,1.05,0.01,">1 nonsynonymous","W106L E141L",2
"lib2","SARS-CoV-2","TTAATGAATGGCACAG",1,61.55,8.19,-2.64,0.14,2.53,1.12,0.01,">1 nonsynonymous","I2T D98V Y175S",3
"lib2","SARS-CoV-2","TTAATGACACAGTGTC",6,46.81,10.69,-0.14,0.04,2.9,1.12,0,"1 nonsynonymous","E10K",1
"lib2","SARS-CoV-2","TTAATGACATTCCCGT",5,94.84,8.35,-2.48,0.17,2.06,1.1,0.01,">1 nonsynonymous","Y119F P161T",2
"lib2","SARS-CoV-2","TTAATGACGAATCCCA",2,9.03,NA,NA,NA,NA,NA,NA,"stop","F8L K87*",2
"lib2","SARS-CoV-2","TTAATGACTACAAGAC",2,20.88,6.85,-3.99,0.6,1.5,1.2,0.07,">1 nonsynonymous","A33L T100S N107L T193D",4
"lib2","SARS-CoV-2","TTAATGACTTAACAAG",1,95.93,10.63,-0.2,0.06,2.95,1.06,0,">1 nonsynonymous","Y91L N120K",2
"lib2","SARS-CoV-2","TTAATGCAAACGTAGC",3,62.97,10.93,0.09,0.07,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATGCAAAGTGCTA",14,290.18,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K56A T140A Q168R P177I",4
"lib2","SARS-CoV-2","TTAATGCAAATAACCC",4,0,NA,NA,NA,NA,NA,NA,"stop","C6G F12* G86I D97L",4
"lib2","SARS-CoV-2","TTAATGCACAAATTGG",5,0.13,NA,NA,NA,NA,NA,NA,"stop","K132L P149*",2
"lib2","SARS-CoV-2","TTAATGCATTATCAAC",2,40.29,8.36,-2.47,0.15,2.94,1.03,0.01,">1 nonsynonymous","C61V T85D D97W L125E",4
"lib2","SARS-CoV-2","TTAATGCCAGTAAATG",4,12.16,9.17,-1.67,0.25,1.5,1,0.04,">1 nonsynonymous","Y50I C61L D90N K114V H189R",5
"lib2","SARS-CoV-2","TTAATGCCCTATCTGT",3,61.69,10.23,-0.61,0.08,2.42,1.13,0,"1 nonsynonymous","E76N",1
"lib2","SARS-CoV-2","TTAATGCTAATCCCAA",5,75.12,9.16,-1.67,0.09,1.71,1.08,0,">1 nonsynonymous","C61L V115R F185N",3
"lib2","SARS-CoV-2","TTAATGCTTACTTAAT",2,25.86,8.53,-2.31,0.08,2.79,1.14,0,">1 nonsynonymous","F62G Y119W",2
"lib2","SARS-CoV-2","TTAATGGAACGGCATC",1,47.68,7.54,-3.29,0.15,1.77,1.15,0.01,"1 nonsynonymous","G172C",1
"lib2","SARS-CoV-2","TTAATGGATACAACCG",2,21.61,8.15,-2.69,0.23,1.88,1.13,0.02,">1 nonsynonymous","S69F A105S L125V G152H",4
"lib2","SARS-CoV-2","TTAATGGATACAATAT",2,8.69,9.97,-0.87,0.16,2.61,1.1,0.01,">1 nonsynonymous","V11A A33L",2
"lib2","SARS-CoV-2","TTAATGGATGCACATA",3,3.18,NA,NA,NA,NA,NA,NA,"stop","T15C C61V T85* D90I I138V G146L V181P",7
"lib2","SARS-CoV-2","TTAATGGTTTTACGAA",2,27.17,8.61,-2.23,0.11,1.94,1.14,0,">1 nonsynonymous","Y35F K114W Y121G S200E",4
"lib2","SARS-CoV-2","TTAATGTAAACAAGCA",3,55.76,10.62,-0.21,0.05,2.9,1.11,0,">1 nonsynonymous","S43I G155K",2
"lib2","SARS-CoV-2","TTAATGTACAACCCTA",5,60.54,9.86,-0.98,0.05,2.67,1.01,0,">1 nonsynonymous","A14L A33T I142L T201N",4
"lib2","SARS-CoV-2","TTAATGTACCACGTAC",3,0.9,NA,NA,NA,NA,NA,NA,"stop","G9I T15S I104L I138V N171* G196A",6
"lib2","SARS-CoV-2","TTAATGTCAGAGTAAC",6,40.77,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y93S V115N",2
"lib2","SARS-CoV-2","TTAATGTTAATAAATC",11,172.84,10.46,-0.38,0.04,2.79,1.07,0,">1 nonsynonymous","N4V E186G T201I",3
"lib2","SARS-CoV-2","TTAATGTTAGACGGCG",2,8,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","V103R P133S",2
"lib2","SARS-CoV-2","TTAATGTTAGTAATAG",2,6.03,10.05,-0.78,0.27,2.85,1,0.02,">1 nonsynonymous","C6R D59K G86N D112A",4
"lib2","SARS-CoV-2","TTAATGTTATCTTAAC",6,68.31,6,-4.84,0.93,1.5,1.13,0.01,">1 nonsynonymous","S19M K114M R127H",3
"lib2","SARS-CoV-2","TTAATGTTCCAGGCTT",5,118.65,10.79,-0.05,0.05,2.95,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATTAAAATACCAG",1,11,7.03,-3.8,0.17,1.5,1.07,0.01,">1 nonsynonymous","R25V N120A V173R",3
"lib2","SARS-CoV-2","TTAATTAAAGTACAAA",7,0.87,NA,NA,NA,NA,NA,NA,"stop","E10* N107L",2
"lib2","SARS-CoV-2","TTAATTAACCACTGAG",3,57.72,10.78,-0.06,0.07,2.85,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATTAATACAAGTA",17,137.94,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F17E L60P W106S N151Y",4
"lib2","SARS-CoV-2","TTAATTAATATAAAAT",1,6.6,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","A14V R136N G146T N157M",4
"lib2","SARS-CoV-2","TTAATTACAGTGACAT",3,6.67,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N13V P96L N120R Y143W",4
"lib2","SARS-CoV-2","TTAATTACGTTCATCA",7,51.28,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V52I G86Q R124V D137T",4
"lib2","SARS-CoV-2","TTAATTAGAAACTGTA",4,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5M S19V S36Y T170I",4
"lib2","SARS-CoV-2","TTAATTAGCCACACAA",4,41.13,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","Y50Q A67D G152N",3
"lib2","SARS-CoV-2","TTAATTAGCTTGATTA",9,7.4,10.09,-0.75,0.31,2.88,1,0.03,">1 nonsynonymous","V32L V37I A105P Q168E",4
"lib2","SARS-CoV-2","TTAATTAGGCGCAAAC",3,1.72,NA,NA,NA,NA,NA,NA,"stop","C102*",1
"lib2","SARS-CoV-2","TTAATTAGTCTGCTAA",11,2.71,NA,NA,NA,NA,NA,NA,"stop","A105M G174M S200*",3
"lib2","SARS-CoV-2","TTAATTAGTTAAATCA",11,115.65,9.49,-1.34,0.08,1.88,1.09,0,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","TTAATTATTAAATATT",11,3.65,NA,NA,NA,NA,NA,NA,"stop","L5C K56* P169G",3
"lib2","SARS-CoV-2","TTAATTATTGAGATAA",2,6.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V Q84N N130E",3
"lib2","SARS-CoV-2","TTAATTCAAAACTACG",8,125,6.2,-4.64,0.5,1.5,1.16,0.01,">1 nonsynonymous","G9F A105I G166L",3
"lib2","SARS-CoV-2","TTAATTCACACAAGAG",10,35.5,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G101I E141W Y159H",3
"lib2","SARS-CoV-2","TTAATTCAGAAAAATG",11,188.27,10.11,-0.73,0.05,2.78,1.04,0,"1 nonsynonymous","Y91V",1
"lib2","SARS-CoV-2","TTAATTCAGACAAAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q C49Y G152S L183K",4
"lib2","SARS-CoV-2","TTAATTCAGAGATGAA",2,28.13,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","C49S V65M G83M Y123V",4
"lib2","SARS-CoV-2","TTAATTCATATTTTTA",2,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121D S164W",2
"lib2","SARS-CoV-2","TTAATTCATTTGTCCG",1,7.36,8.85,-1.98,0.14,1.9,1,0.01,">1 nonsynonymous","N1E Y35C N120V G155T",4
"lib2","SARS-CoV-2","TTAATTCCGGAAATGG",5,60.06,10.12,-0.72,0.06,2.85,1.09,0,">1 nonsynonymous","N24K N118V",2
"lib2","SARS-CoV-2","TTAATTCGACAAAGGG",3,32.5,10.19,-0.64,0.07,2.42,1,0,">1 nonsynonymous","S43V P96K",2
"lib2","SARS-CoV-2","TTAATTCGATTACCTA",1,73.56,10.88,0.05,0.05,2.97,1.02,0,"1 nonsynonymous","Y178F",1
"lib2","SARS-CoV-2","TTAATTCGGGAACTAC",7,36.57,6.15,-4.69,1.11,1.5,1.15,0.04,">1 nonsynonymous","D34N P54F F62L L125A F167Q A190H",6
"lib2","SARS-CoV-2","TTAATTCTAAACAGGT",4,48.12,6.84,-3.99,0.39,1.5,1.11,0.03,">1 nonsynonymous","K48S Q84F S139F G155E",4
"lib2","SARS-CoV-2","TTAATTCTATGATCAA",2,19.59,10.18,-0.66,0.11,2.75,1.04,0.01,">1 nonsynonymous","A14S R136L",2
"lib2","SARS-CoV-2","TTAATTCTGAAATTAT",4,11.81,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","T46S S69L P82M N110L Y119M E141N Q163K",7
"lib2","SARS-CoV-2","TTAATTCTGGCGATGT",2,61.62,7.93,-2.9,0.1,1.99,1.06,0,">1 nonsynonymous","G9A Y35D G146R",3
"lib2","SARS-CoV-2","TTAATTCTTATTATAT",12,129.2,10.78,-0.06,0.03,3,1.03,0,">1 nonsynonymous","Q144N A192F",2
"lib2","SARS-CoV-2","TTAATTGAAGAGAACA",6,78.62,10.02,-0.82,0.09,2.17,1.06,0,">1 nonsynonymous","R16Q V52G L162I",3
"lib2","SARS-CoV-2","TTAATTGACTCTCTAG",4,92.44,9.41,-1.43,0.06,2.87,1.11,0,">1 nonsynonymous","A145R F160S",2
"lib2","SARS-CoV-2","TTAATTGAGACATATA",5,106.68,10.84,0,0.03,2.95,1.06,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TTAATTGAGATACTAA",3,54.3,8.44,-2.39,0.12,2.38,1.07,0.01,">1 nonsynonymous","E141H Q176S",2
"lib2","SARS-CoV-2","TTAATTGCCACGATAA",9,54.27,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","I2Y F12N I88M G101L F167L K199P",6
"lib2","SARS-CoV-2","TTAATTGTTCCATGCA",16,29.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68M D97K E154R G196R",4
"lib2","SARS-CoV-2","TTAATTTACCAATACT",6,32.13,10.6,-0.23,0.05,2.87,1.04,0,">1 nonsynonymous","G9R A33T",2
"lib2","SARS-CoV-2","TTAATTTAGGAATGTG",11,95.2,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S19R S36W D59L G83K D97S W106F",6
"lib2","SARS-CoV-2","TTAATTTAGGAGTAAT",1,10.28,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","F44L Y91S F99L G146W E154H K199E",6
"lib2","SARS-CoV-2","TTAATTTCACAATGAA",3,35.78,11.3,0.47,0.06,2.74,1.25,0,">1 nonsynonymous","I2N Y91F Q163V",3
"lib2","SARS-CoV-2","TTAATTTCCATAATGG",1,25.3,10.89,0.06,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAATTTCTGGTGTAT",3,65.6,9.55,-1.29,0.04,2.81,1.06,0,"1 nonsynonymous","R73P",1
"lib2","SARS-CoV-2","TTAATTTTACGAGAAG",4,16.74,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A105K N120L",2
"lib2","SARS-CoV-2","TTAATTTTGGGTTATT",5,0,NA,NA,NA,NA,NA,NA,"stop","G86R V115H E135* N171Y",4
"lib2","SARS-CoV-2","TTACAAAAAGTTTAAC",7,38.95,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","S19R S43Y V103K F185S",4
"lib2","SARS-CoV-2","TTACAAAAATCATCCA",6,169.92,9.66,-1.18,0.02,2.89,1.07,0,">1 nonsynonymous","D34C N130S F156K",3
"lib2","SARS-CoV-2","TTACAAAACCGCAGAC",5,45.43,9.27,-1.57,0.2,1.5,1.11,0.02,">1 nonsynonymous","N4Y T46K C49Y S53R",4
"lib2","SARS-CoV-2","TTACAAAACGTAGGAA",3,9.46,9.32,-1.52,0.23,2.56,1.05,0.03,">1 nonsynonymous","D75I G152T",2
"lib2","SARS-CoV-2","TTACAAAACTACTAAG",7,2.52,NA,NA,NA,NA,NA,NA,"stop","N1C C61* P82C",3
"lib2","SARS-CoV-2","TTACAAAAGAACAATG",2,57.07,10.36,-0.47,0.05,2.9,1.05,0,">1 nonsynonymous","G9R Y123V",2
"lib2","SARS-CoV-2","TTACAAAAGAAGTAGA",5,9.03,9.41,-1.43,0.2,2.48,1.17,0.01,">1 nonsynonymous","S41N R136P",2
"lib2","SARS-CoV-2","TTACAAAAGCGAAATG",6,5.58,NA,NA,NA,NA,NA,NA,"stop","F47V G86* E141F",3
"lib2","SARS-CoV-2","TTACAAAAGTATCAAC",2,36.43,10.83,-0.01,0.05,2.94,1.06,0,"1 nonsynonymous","K128S",1
"lib2","SARS-CoV-2","TTACAAAATAAGCAAG",4,13.53,6.24,-4.59,0.87,1.5,1.15,0.06,">1 nonsynonymous","E10A N58S V65T P82T R124H R136Q",6
"lib2","SARS-CoV-2","TTACAAACAAATATGA",9,122.82,10.87,0.03,0.05,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TTACAAACAACATCAT",12,77.72,6.03,-4.8,1.18,1.5,1.24,0.03,">1 nonsynonymous","G51L D59R G166L",3
"lib2","SARS-CoV-2","TTACAAACAACTACCT",2,9.77,7.72,-3.12,0.24,3,1.05,0.01,">1 nonsynonymous","D90T G117V",2
"lib2","SARS-CoV-2","TTACAAACACCGTCTA",8,75.01,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N40F T55V P96L F167E",4
"lib2","SARS-CoV-2","TTACAAACGAAAACGC",7,34.73,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","K26V G83Y D97N V180S",4
"lib2","SARS-CoV-2","TTACAAACTTTTAAAC",2,8.96,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F99N N107R L122N",3
"lib2","SARS-CoV-2","TTACAAAGAGCCTTCT",3,109.93,10.79,-0.05,0.05,2.92,1.1,0,">1 nonsynonymous","L5A V173N K198S",3
"lib2","SARS-CoV-2","TTACAAATAACGAACA",8,80.22,6.82,-4.01,0.3,1.5,1.2,0.02,">1 nonsynonymous","G51W Y119I",2
"lib2","SARS-CoV-2","TTACAAATTTCAACCT",15,20.84,7.74,-3.09,0.35,1.5,1.09,0.04,">1 nonsynonymous","S41I C61T D137Y V173M",4
"lib2","SARS-CoV-2","TTACAACAACATGTAT",12,89.73,8.67,-2.16,0.17,1.5,1.04,0.01,">1 nonsynonymous","K94L K128M",2
"lib2","SARS-CoV-2","TTACAACAATACAATC",9,172.58,9.59,-1.25,0.03,2.91,1.1,0,">1 nonsynonymous","D59G Q84A Y119S",3
"lib2","SARS-CoV-2","TTACAACACAGAAAAG",4,59.28,10.74,-0.1,0.06,2.93,1.06,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TTACAACAGAAAGGTA",1,33.79,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N107D G117S K128A",3
"lib2","SARS-CoV-2","TTACAACCATTCTATT",4,35.01,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","G86D D90S W106G V115E F160R",5
"lib2","SARS-CoV-2","TTACAACCTAGTTCCG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","N151* V182G",2
"lib2","SARS-CoV-2","TTACAACCTATATATA",2,63.16,10.53,-0.31,0.05,2.89,1.08,0,"1 nonsynonymous","T85D",1
"lib2","SARS-CoV-2","TTACAACCTATATTAA",6,105.66,9.59,-1.24,0.09,2.16,1.05,0,">1 nonsynonymous","F17L V173Y",2
"lib2","SARS-CoV-2","TTACAACCTTATGCAT",1,48.4,10.87,0.04,0.08,2.94,1.02,0,"1 nonsynonymous","T100I",1
"lib2","SARS-CoV-2","TTACAACGAAAGGCAA",8,12.8,6.84,-4,0.65,1.5,1.36,0.05,">1 nonsynonymous","F62D V103L L183K",3
"lib2","SARS-CoV-2","TTACAACGAGATATGG",15,135.26,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","P54E A67P W106V T140M G174V",5
"lib2","SARS-CoV-2","TTACAACTAACGATTC",4,1246.03,10.74,-0.1,0.02,2.97,1.05,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","TTACAACTACCTAGCC",2,64.44,10.78,-0.06,0.04,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACAACTTGATGTAT",5,153.96,9.27,-1.57,0.06,1.99,1.04,0,">1 nonsynonymous","C6L F12G",2
"lib2","SARS-CoV-2","TTACAACTTTCTAATA",1,0.16,NA,NA,NA,NA,NA,NA,"stop","F12V F44V F99K S113P T140G N151*",6
"lib2","SARS-CoV-2","TTACAAGAAGATAGCA",3,0.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S V52I Q144L",3
"lib2","SARS-CoV-2","TTACAAGAAGCGAATA",1,7.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51I C61L W106P I142S S184L",5
"lib2","SARS-CoV-2","TTACAAGAATGGGGTA",1,17.39,10.7,-0.13,0.07,2.95,1.1,0,"1 nonsynonymous","K198R",1
"lib2","SARS-CoV-2","TTACAAGATTAAGTTG",2,57.3,10.74,-0.09,0.06,2.95,1.05,0,">1 nonsynonymous","D97H N171Q",2
"lib2","SARS-CoV-2","TTACAAGCACGAATAT",1,0.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43L V103N S113I S139Y",4
"lib2","SARS-CoV-2","TTACAAGCATTAGTAA",5,100.87,10.06,-0.77,0.02,2.88,1.09,0,">1 nonsynonymous","A33V V77L F156L V173R",4
"lib2","SARS-CoV-2","TTACAAGCCGAGGAGG",1,35.38,10.75,-0.09,0.09,2.97,1.05,0,">1 nonsynonymous","V37E L122V Q144N",3
"lib2","SARS-CoV-2","TTACAAGCCTCCAACG",19,211.88,10.18,-0.66,0.03,2.98,1.02,0,">1 nonsynonymous","Y35S F156P",2
"lib2","SARS-CoV-2","TTACAAGCGATAAAGT",5,74.88,10.78,-0.05,0.04,2.97,1.06,0,"1 nonsynonymous","D97K",1
"lib2","SARS-CoV-2","TTACAAGGGATAAACA",3,64.19,9.53,-1.3,0.07,1.98,1.03,0,"1 nonsynonymous","S69V",1
"lib2","SARS-CoV-2","TTACAAGTAGCCTAGT",1,67.48,10.9,0.06,0.06,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACAAGTAGTCCTAA",8,105.16,10.91,0.07,0.05,2.9,1.11,0,">1 nonsynonymous","R16E T55S",2
"lib2","SARS-CoV-2","TTACAAGTTATCCTAA",1,12.1,10.8,-0.04,0.06,3,1,0,"1 nonsynonymous","N64I",1
"lib2","SARS-CoV-2","TTACAAGTTTAAGACT",9,42.75,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T15D R78F G86L S147L N171L",5
"lib2","SARS-CoV-2","TTACAATAACCATCGT",3,30.32,6.39,-4.45,0.88,1.5,1.33,0.04,">1 nonsynonymous","P7H D112L E141I",3
"lib2","SARS-CoV-2","TTACAATGCCTGCATA",1,45.59,10.84,0.01,0.03,2.88,1.13,0,">1 nonsynonymous","S53Q T85R S129E",3
"lib2","SARS-CoV-2","TTACAATGGACCCTAT",1,26.63,10.81,-0.02,0.04,2.91,1.09,0,">1 nonsynonymous","K56E D90L",2
"lib2","SARS-CoV-2","TTACAATGGATTCCGA",8,88.05,10.45,-0.39,0.05,2.98,1.06,0,"1 nonsynonymous","K87L",1
"lib2","SARS-CoV-2","TTACAATGGGATTGTT",2,32.72,10.81,-0.02,0.06,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACAATGTAAACGAA",6,127.64,10.04,-0.79,0.06,2.46,1.01,0,"1 nonsynonymous","E135L",1
"lib2","SARS-CoV-2","TTACAATTACCAGAAA",23,36.11,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T15R A67I F99N N118F",4
"lib2","SARS-CoV-2","TTACAATTACTAATAT",2,48.73,9.89,-0.95,0.05,2.89,1.02,0,">1 nonsynonymous","C61T D97P N151A G155T",4
"lib2","SARS-CoV-2","TTACAATTCGAAACCA",21,378.07,10.01,-0.83,0.03,2.9,1.08,0,">1 nonsynonymous","N1T L125V",2
"lib2","SARS-CoV-2","TTACAATTTTAAAGAA",21,49.39,6.01,-4.82,1,1.5,1.17,0.02,">1 nonsynonymous","A105K D112Y",2
"lib2","SARS-CoV-2","TTACACAAAAGGTTAT",4,25.28,10.72,-0.11,0.04,2.99,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACACAAAAGTAGAA",3,59.97,9.64,-1.2,0.1,2.24,1.03,0,">1 nonsynonymous","I2N F8S T201N",3
"lib2","SARS-CoV-2","TTACACAAATTATAAT",9,109.43,10.72,-0.11,0.05,2.94,1.07,0,">1 nonsynonymous","N120F S200V",2
"lib2","SARS-CoV-2","TTACACAACCAATCGC",9,1.4,NA,NA,NA,NA,NA,NA,"stop","G86* C102N G116F",3
"lib2","SARS-CoV-2","TTACACAAGGATGTCA",14,110.51,6,-4.84,2,1.5,1.21,0.01,"1 nonsynonymous","I80R",1
"lib2","SARS-CoV-2","TTACACAATGCAAGAA",3,14.76,9.63,-1.2,0.11,2.75,1.13,0.01,">1 nonsynonymous","D98T N107C T201R",3
"lib2","SARS-CoV-2","TTACACACAGGTAACT",11,119.57,6.15,-4.69,0.75,1.5,1.18,0.02,">1 nonsynonymous","F44L F126P",2
"lib2","SARS-CoV-2","TTACACACGATTTCCT",11,109.2,9.74,-1.1,0.07,2.03,1.07,0,">1 nonsynonymous","T55A S69G L188Q",3
"lib2","SARS-CoV-2","TTACACACGTAGCAAT",3,88.93,8.4,-2.44,0.11,2.57,1.07,0,"1 nonsynonymous","Q176T",1
"lib2","SARS-CoV-2","TTACACACTAAACCAC",3,23.31,9.03,-1.81,0.12,2.59,1,0.01,">1 nonsynonymous","K56A Q79H K87E",3
"lib2","SARS-CoV-2","TTACACAGAATATAAT",1,12.5,10.43,-0.4,0.09,2.77,1.25,0,"1 nonsynonymous","F12L",1
"lib2","SARS-CoV-2","TTACACAGACTTAGCA",16,384.81,10.82,-0.02,0.04,2.88,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TTACACAGGATTAGAA",5,130.73,9.11,-1.73,0.06,1.79,1.08,0,">1 nonsynonymous","V37I S69E",2
"lib2","SARS-CoV-2","TTACACATAATAAACC",5,43.04,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A105S C150Y",2
"lib2","SARS-CoV-2","TTACACATATATCAAT",1,10.64,8,-2.83,0.19,1.5,1,0.01,">1 nonsynonymous","V115S S139P",2
"lib2","SARS-CoV-2","TTACACATCAAATAAA",1,0.24,NA,NA,NA,NA,NA,NA,"stop","V37L S43E P82S P96C S139*",5
"lib2","SARS-CoV-2","TTACACATCATACCAT",1,9.43,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","F44C D90I R127M",3
"lib2","SARS-CoV-2","TTACACATGCCGCGGT",6,0.91,NA,NA,NA,NA,NA,NA,"stop","P7E K56G N107Y S139* G152N G174R",6
"lib2","SARS-CoV-2","TTACACCACATACATA",9,130.38,10.78,-0.05,0.04,2.97,1.07,0,"1 nonsynonymous","P54S",1
"lib2","SARS-CoV-2","TTACACCACTCGCATA",1,9.25,8.44,-2.4,0.3,1.5,1.03,0.05,">1 nonsynonymous","N4K F17N",2
"lib2","SARS-CoV-2","TTACACCAGGGAACTG",2,30.82,8.92,-1.92,0.11,2.03,1.1,0.01,">1 nonsynonymous","T46V L57F D75V",3
"lib2","SARS-CoV-2","TTACACCCAATAGTTA",6,84.78,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N13G S29L N107R F160C",4
"lib2","SARS-CoV-2","TTACACCCCACATGAT",1,99.56,10.59,-0.24,0.05,2.95,1.03,0,"1 nonsynonymous","E154M",1
"lib2","SARS-CoV-2","TTACACCCTATCAGCA",6,82.19,6.97,-3.86,0.31,1.5,1.2,0.02,">1 nonsynonymous","S41V Y66F G146C G152H",4
"lib2","SARS-CoV-2","TTACACCCTCCTCCTG",3,65.31,10.73,-0.11,0.04,2.97,1.04,0,">1 nonsynonymous","T3N V37L T140M Q144E",4
"lib2","SARS-CoV-2","TTACACCGATGTGGAA",6,37.32,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","N40Y K56L N64D I104S L131K K199N",6
"lib2","SARS-CoV-2","TTACACCTATTATTGA",1,6.73,10.82,-0.02,0.11,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACACCTCAAACTTA",2,10.37,10.79,-0.05,0.08,3,1.05,0,">1 nonsynonymous","R16F T85R V153I",3
"lib2","SARS-CoV-2","TTACACCTCCCCTTAC",2,30.23,10.06,-0.78,0.08,2.08,1.06,0,">1 nonsynonymous","D75K I88V K128C",3
"lib2","SARS-CoV-2","TTACACGAAGTGTCCA",6,2.25,NA,NA,NA,NA,NA,NA,"stop","G9T G101* V173G",3
"lib2","SARS-CoV-2","TTACACGAGAAAAGGT",7,2.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I104G G174R E186Y",3
"lib2","SARS-CoV-2","TTACACGAGACCACGA",3,7.32,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F47V Y121G R127N G155S G166S",5
"lib2","SARS-CoV-2","TTACACGAGATCCCTT",12,101.58,10.13,-0.7,0.07,2.59,1.04,0,">1 nonsynonymous","L5P P7H N107G",3
"lib2","SARS-CoV-2","TTACACGCAATATCTA",8,107.41,10.63,-0.21,0.05,2.86,1.08,0,">1 nonsynonymous","A42R C61S",2
"lib2","SARS-CoV-2","TTACACGCGTGAACGA",1,3.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68C D112C E135K G174E F185M",5
"lib2","SARS-CoV-2","TTACACGGAATATTTA",9,273.55,10.1,-0.73,0.03,2.95,1.02,0,">1 nonsynonymous","D75V G174N",2
"lib2","SARS-CoV-2","TTACACGGGGGTGAAA",5,57.71,6.39,-4.45,0.47,1.5,1.17,0.02,">1 nonsynonymous","L5I V71E D90S F185N",4
"lib2","SARS-CoV-2","TTACACGTAGTCAGCT",3,58.16,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56L L122M R136E Q176R",4
"lib2","SARS-CoV-2","TTACACTAACTTAGCT",7,40.03,9.9,-0.93,0.09,2.4,1,0,">1 nonsynonymous","D34F S53F",2
"lib2","SARS-CoV-2","TTACACTATCGAGTTA",2,10.55,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","D59G R73T I104Y R127T",4
"lib2","SARS-CoV-2","TTACACTATGTTCATC",21,357.46,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","D98E C158W",2
"lib2","SARS-CoV-2","TTACACTATTCTTGCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58T K128D G155Y",3
"lib2","SARS-CoV-2","TTACACTCAAGCGAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y91D S129*",2
"lib2","SARS-CoV-2","TTACACTCATTTAACA",7,107.76,10.75,-0.09,0.03,2.92,1.09,0,"1 nonsynonymous","N151G",1
"lib2","SARS-CoV-2","TTACACTCCAACTTCC",1,38,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A33W K56S F62L Y93S K114A V173A",6
"lib2","SARS-CoV-2","TTACACTCCACATTAT",9,86.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82S G116P",2
"lib2","SARS-CoV-2","TTACACTGACTAGCCT",8,60.97,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N4Y G86V T170C K198T",4
"lib2","SARS-CoV-2","TTACACTGTTGGCCAA",9,73.31,6,-4.84,1.9,1.5,1.14,0.01,">1 nonsynonymous","K56L W106C Y119S Y175F",4
"lib2","SARS-CoV-2","TTACACTTTGGTTCGC",4,1.69,NA,NA,NA,NA,NA,NA,"stop","Y35R S45H R78T F99* N120F",5
"lib2","SARS-CoV-2","TTACAGAATCAATTGG",1,0,NA,NA,NA,NA,NA,NA,"stop","P133* V180L",2
"lib2","SARS-CoV-2","TTACAGAATTAATCAA",3,8.4,6.15,-4.69,0.53,1.5,1.06,0.01,">1 nonsynonymous","Y39T V103N D137I K198R",4
"lib2","SARS-CoV-2","TTACAGAATTCGATAC",25,93.77,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","T3I A14R F47V D97P R127I",5
"lib2","SARS-CoV-2","TTACAGACACCTTCTT",1,65.05,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","V77I A81S V182Q",3
"lib2","SARS-CoV-2","TTACAGACGCAGTCAA",1,37.88,10.57,-0.26,0.07,2.82,1.16,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","TTACAGACTTACAAGG",2,6.54,NA,NA,NA,NA,NA,0.25,"1 nonsynonymous","V103P",1
"lib2","SARS-CoV-2","TTACAGAGAAATATAA",4,3.67,NA,NA,NA,NA,NA,NA,"stop","F62L P82L Y121* K128F",4
"lib2","SARS-CoV-2","TTACAGAGCAAAAGAG",2,54.85,6,-4.84,1.41,1.75,1.13,0,">1 nonsynonymous","Q84P R136H Q168C Q176K",4
"lib2","SARS-CoV-2","TTACAGATAAATAGCC",6,14.13,6,-4.84,2,3,1.14,0,">1 nonsynonymous","L38R N58M A81L G166T G174V",5
"lib2","SARS-CoV-2","TTACAGATAATCGTCG",4,61.09,8.71,-2.13,0.14,2.23,1.09,0.01,">1 nonsynonymous","F62M P169G E186F",3
"lib2","SARS-CoV-2","TTACAGATATAGAAAG",2,11.87,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","C6V T85L L122V G174Y T201V",5
"lib2","SARS-CoV-2","TTACAGATATCCGAGT",4,0.38,NA,NA,NA,NA,NA,NA,"stop","A14S C158* H189C",3
"lib2","SARS-CoV-2","TTACAGATTATGAACT",10,192.27,10.66,-0.17,0.03,2.92,1.09,0,">1 nonsynonymous","K114T P149Q",2
"lib2","SARS-CoV-2","TTACAGCACTTGACGG",2,1.37,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F D59E Y93A",3
"lib2","SARS-CoV-2","TTACAGCATTTTAAAT",2,12.38,8.76,-2.08,0.08,2.99,1.04,0,"1 nonsynonymous","N171R",1
"lib2","SARS-CoV-2","TTACAGCCACATCCCC",6,46.23,9.66,-1.18,0.15,1.93,1.18,0.01,">1 nonsynonymous","S41T P54G T85M L122E P149Y",5
"lib2","SARS-CoV-2","TTACAGCGAATATTTA",9,18.98,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","S41A A89T D97C V115W R124G",5
"lib2","SARS-CoV-2","TTACAGCTTAAAGGTG",8,120.64,9.92,-0.92,0.05,2.63,1.08,0,">1 nonsynonymous","Y66Q G152T",2
"lib2","SARS-CoV-2","TTACAGGAACCCTAGC",3,0,NA,NA,NA,NA,NA,NA,"stop","D98E I142N G152* Q176*",4
"lib2","SARS-CoV-2","TTACAGGCAGGATAGT",5,81.41,10.35,-0.49,0.06,2.89,1.08,0,">1 nonsynonymous","G9I N30D C61T F160H",4
"lib2","SARS-CoV-2","TTACAGTAATCAAACC",1,69.87,10.3,-0.54,0.06,2.79,1.03,0,">1 nonsynonymous","S53I G83M S129L",3
"lib2","SARS-CoV-2","TTACAGTCAGTAATCG",4,111.52,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","S29Y V37T P161Y",3
"lib2","SARS-CoV-2","TTACAGTCCACACCGC",4,26.04,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y91P L183P",2
"lib2","SARS-CoV-2","TTACAGTGGACTTGCG",3,1.28,NA,NA,NA,NA,NA,NA,"stop","T55* N109S",2
"lib2","SARS-CoV-2","TTACAGTTAAACTATT",4,96.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25T A33R R73Q G155Y G166D",5
"lib2","SARS-CoV-2","TTACAGTTCATGCAAG",11,2.21,NA,NA,NA,NA,NA,NA,"stop","Y91* K128L F134S",3
"lib2","SARS-CoV-2","TTACAGTTCGGTCTAG",2,25.87,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","V11Y D68R",2
"lib2","SARS-CoV-2","TTACATAAGCCGCATA",3,13.25,9.76,-1.08,0.13,2.9,1.09,0.01,"1 nonsynonymous","Y143F",1
"lib2","SARS-CoV-2","TTACATAAGCTTGAAA",7,31.75,8.36,-2.48,0.26,1.5,1,0.04,">1 nonsynonymous","T63S V77G",2
"lib2","SARS-CoV-2","TTACATAATGGTCCGG",17,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41Q T63A",2
"lib2","SARS-CoV-2","TTACATACATAAACAA",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I80K V173I",2
"lib2","SARS-CoV-2","TTACATACCAAGTAAG",2,11.36,9.84,-1,0.13,2.5,1,0.01,">1 nonsynonymous","F8L F44T K56S S129M V194I",5
"lib2","SARS-CoV-2","TTACATACCAATTGAG",2,28.23,7,-3.84,0.28,1.5,1.16,0.02,"1 nonsynonymous","F99T",1
"lib2","SARS-CoV-2","TTACATACGAATCTTT",3,58.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11C A81T",2
"lib2","SARS-CoV-2","TTACATACGAGGACTA",10,525.81,10.71,-0.13,0.03,2.94,1.05,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","TTACATACGAGTTTTC",5,43.66,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","E154D P177V E186R",3
"lib2","SARS-CoV-2","TTACATACTAAACAGT",7,24.49,7.27,-3.56,0.32,1.5,1.28,0.03,">1 nonsynonymous","T15L L95M D98Y K114V",4
"lib2","SARS-CoV-2","TTACATACTGAAGAAT",1,45.25,9.37,-1.46,0.08,2.51,1.04,0,"1 nonsynonymous","N107M",1
"lib2","SARS-CoV-2","TTACATAGACACTACT",2,12.65,6.12,-4.71,1.59,1.5,1.31,0.05,">1 nonsynonymous","V37I T55V Q176F",3
"lib2","SARS-CoV-2","TTACATAGCAAGGGAA",7,153.57,8.5,-2.34,0.1,3,1.07,0,"1 nonsynonymous","N157K",1
"lib2","SARS-CoV-2","TTACATAGTCATAAAC",1,7.4,6,-4.84,2,1.5,1.14,0.06,">1 nonsynonymous","F62H D68N",2
"lib2","SARS-CoV-2","TTACATATATATTTCG",4,30.55,8.54,-2.3,0.16,1.96,1.04,0.01,">1 nonsynonymous","C31E A105T S139Q",3
"lib2","SARS-CoV-2","TTACATCAAAGGTGTC",1,33.75,10.34,-0.5,0.04,2.92,1.02,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","TTACATCAAGACATCA",2,25.07,10.62,-0.21,0.08,2.85,1.15,0,"1 nonsynonymous","C61A",1
"lib2","SARS-CoV-2","TTACATCAAGGCCTTA",2,11.02,6,-4.84,2,1.5,1.17,0.07,">1 nonsynonymous","A14E W106L Y121S L162R",4
"lib2","SARS-CoV-2","TTACATCAATCCGACT",2,0.27,NA,NA,NA,NA,NA,NA,"stop","V65* F99I K198E",3
"lib2","SARS-CoV-2","TTACATCACCCTGGTC",18,250.27,6.2,-4.64,0.62,1.5,1.2,0.01,">1 nonsynonymous","E10I A67F V77R",3
"lib2","SARS-CoV-2","TTACATCATTTAACCA",18,218.06,10.34,-0.5,0.03,2.82,1.03,0,"1 nonsynonymous","Q84F",1
"lib2","SARS-CoV-2","TTACATCGACAAATAG",6,21.94,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y50E Y165R",2
"lib2","SARS-CoV-2","TTACATCTATTCCAAA",7,150.38,8.73,-2.1,0.08,2.92,1.09,0,">1 nonsynonymous","K87M Y143I",2
"lib2","SARS-CoV-2","TTACATCTCAAAATCT",5,108.79,9.3,-1.54,0.11,1.83,1.13,0,">1 nonsynonymous","N24K V32R S43P S69A D90T",5
"lib2","SARS-CoV-2","TTACATCTCACGCTTG",5,1.34,NA,NA,NA,NA,NA,NA,"stop","Y35*",1
"lib2","SARS-CoV-2","TTACATGAGTACCTTT",2,64.54,10.12,-0.72,0.09,2.53,1.06,0,">1 nonsynonymous","A14V I104V K114A",3
"lib2","SARS-CoV-2","TTACATGATGGGCTCG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51V P82K K114L L162G",4
"lib2","SARS-CoV-2","TTACATGCACAAAAGT",2,91.78,10.05,-0.78,0.05,2.7,1.05,0,">1 nonsynonymous","T100F A105Y E141S",3
"lib2","SARS-CoV-2","TTACATGCATCGTATC",7,72.82,6,-4.84,2,3,1.14,0,">1 nonsynonymous","D98F C150R",2
"lib2","SARS-CoV-2","TTACATGCCCTATCGT",2,56.11,10.58,-0.25,0.05,2.94,1.04,0,">1 nonsynonymous","L60K D75M",2
"lib2","SARS-CoV-2","TTACATGTAAACACAA",3,156.54,9.53,-1.31,0.06,2.77,1.11,0,">1 nonsynonymous","L125C Y178T",2
"lib2","SARS-CoV-2","TTACATGTATCAAGAA",1,20.93,11.03,0.19,0.06,2.98,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACATTAGAATGCCG",6,203.19,10.54,-0.3,0.03,2.93,1.07,0,">1 nonsynonymous","D90N F156P",2
"lib2","SARS-CoV-2","TTACATTATTGAAGTG",4,1.34,NA,NA,NA,NA,NA,NA,"stop","S69E P133R Y159*",3
"lib2","SARS-CoV-2","TTACATTCAGGACCAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTACATTCCGTATAAA",1,4.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K Q168L",2
"lib2","SARS-CoV-2","TTACATTCTCCATATA",2,20.05,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","N58L G101T",2
"lib2","SARS-CoV-2","TTACATTGAAGAACAA",5,12.58,8.27,-2.56,0.14,1.5,1,0.01,">1 nonsynonymous","I88L E154F G166S",3
"lib2","SARS-CoV-2","TTACATTGGTTTCTTT",19,281.19,10.79,-0.05,0.04,2.97,1.05,0,"1 nonsynonymous","S184V",1
"lib2","SARS-CoV-2","TTACATTTAATCAACT",2,53.51,10.52,-0.31,0.05,2.9,1.09,0,">1 nonsynonymous","L5K K87R D98K",3
"lib2","SARS-CoV-2","TTACCAAAAATCTTAG",1,35.32,10.61,-0.22,0.05,2.89,1.1,0,">1 nonsynonymous","L5R V37D S139R A192E",4
"lib2","SARS-CoV-2","TTACCAAAATTAACAC",1,28.3,10.93,0.09,0.09,2.96,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCAAACATAAGGA",3,9.94,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","A14I L60R D90C P161G Y175L",5
"lib2","SARS-CoV-2","TTACCAAATAGGGCAT",14,59.29,9.05,-1.78,0.31,1.5,1,0.03,">1 nonsynonymous","K94L K128Y",2
"lib2","SARS-CoV-2","TTACCAACACATTGCT",1,36.43,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","R27K T63S V77K A89F D97H T201L",6
"lib2","SARS-CoV-2","TTACCAACGAGAAGCA",5,94.1,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","G116K P149S G172R P197S",4
"lib2","SARS-CoV-2","TTACCAAGGATGACCA",2,0.35,NA,NA,NA,NA,NA,NA,"stop","E10H F17Y P96* W106F P149S",5
"lib2","SARS-CoV-2","TTACCAATAAAGTATT",4,55.49,8.14,-2.7,0.13,1.96,1.08,0.01,">1 nonsynonymous","N107L T170Q",2
"lib2","SARS-CoV-2","TTACCAATAATGTAAA",18,249.37,9.57,-1.26,0.02,2.95,1.03,0,">1 nonsynonymous","N4S N118G F160S",3
"lib2","SARS-CoV-2","TTACCAATCTAGTCAT",5,87.25,10.65,-0.19,0.07,2.87,1.05,0,"1 nonsynonymous","G155K",1
"lib2","SARS-CoV-2","TTACCAATGGCGCAGT",2,38.57,10.44,-0.39,0.06,2.9,1.07,0,">1 nonsynonymous","S45T K87M",2
"lib2","SARS-CoV-2","TTACCAATTAAAGCGT",8,35.47,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","L95A E141V T170I",3
"lib2","SARS-CoV-2","TTACCAATTGTTGCAC",5,112.83,7.99,-2.85,0.15,2.03,1.08,0.01,">1 nonsynonymous","I2S D34Q C61N Y91F G146K",5
"lib2","SARS-CoV-2","TTACCAATTTTTATTT",3,32.32,8.22,-2.62,0.15,2.96,1.06,0.01,">1 nonsynonymous","G83T K87V G117Y",3
"lib2","SARS-CoV-2","TTACCACAATCCGCTA",6,185.29,9.59,-1.24,0.07,2.49,1.05,0,">1 nonsynonymous","I2N L60E Y121C S184I",4
"lib2","SARS-CoV-2","TTACCACACTATACAA",8,79.93,9.65,-1.19,0.06,1.98,1.05,0,">1 nonsynonymous","K94L L122F",2
"lib2","SARS-CoV-2","TTACCACAGATAGAAC",1,52.4,10.34,-0.49,0.06,2.84,1.08,0,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","TTACCACCAGAAGGCG",4,99.26,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","A18Q D112N",2
"lib2","SARS-CoV-2","TTACCACCCACATTTG",5,21.15,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","T15V V37Q G86E",3
"lib2","SARS-CoV-2","TTACCACCCTACTAAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F12V A22V I72N A81D I88* T100S Y119*",7
"lib2","SARS-CoV-2","TTACCACCTGTTAACT",9,67.96,10.73,-0.11,0.06,2.95,1.09,0,"1 nonsynonymous","Y91F",1
"lib2","SARS-CoV-2","TTACCACGGTTCTAAA",5,55.45,8.35,-2.49,0.21,1.5,1.05,0.02,">1 nonsynonymous","F8C T55W N64H R73K T140Q",5
"lib2","SARS-CoV-2","TTACCACGTAAGGCTT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30T T140G",2
"lib2","SARS-CoV-2","TTACCACTCAAAAGTA",7,118.51,10.03,-0.8,0.08,2.37,1.05,0,">1 nonsynonymous","S43G E135W",2
"lib2","SARS-CoV-2","TTACCACTGAATAAAG",9,55.53,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37G A42E Y93T F99L L131M V173E",6
"lib2","SARS-CoV-2","TTACCAGAAAATAAAG",6,12.08,6,-4.84,0.77,1.5,1.07,0.01,">1 nonsynonymous","A33S G86Y K114L",3
"lib2","SARS-CoV-2","TTACCAGATGTCTAAC",1,8.51,10.37,-0.46,0.14,2.82,1.02,0.01,"1 nonsynonymous","P133Q",1
"lib2","SARS-CoV-2","TTACCAGCAAGTAAAA",2,17.59,8.2,-2.63,0.1,2.12,1,0.01,">1 nonsynonymous","Y119S S129M Y178L C195Q",4
"lib2","SARS-CoV-2","TTACCAGCGAGTCGAT",10,78.74,9.02,-1.81,0.04,2.86,1.08,0,">1 nonsynonymous","N64F Y119E K128H E154G",4
"lib2","SARS-CoV-2","TTACCAGCGCAATGCT",3,13.56,8.46,-2.37,0.26,1.99,1.28,0.02,">1 nonsynonymous","N118H I142F V194L",3
"lib2","SARS-CoV-2","TTACCAGGGTGCGAAA",7,106.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51C K56R Y123L",3
"lib2","SARS-CoV-2","TTACCAGTAGTTGATG",5,0.24,NA,NA,NA,NA,NA,NA,"stop","Y66* C102F",2
"lib2","SARS-CoV-2","TTACCAGTCAACGCTT",3,39.35,6,-4.84,0.61,1.5,1.13,0.01,">1 nonsynonymous","L57G Y143N",2
"lib2","SARS-CoV-2","TTACCAGTCTCTCTTG",6,62.38,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N107H E141A N157F",3
"lib2","SARS-CoV-2","TTACCATAAATGTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N120* N151R P169L",3
"lib2","SARS-CoV-2","TTACCATAACGGTACC",3,85.33,10.77,-0.07,0.06,2.89,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCATACGACACAT",13,150.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I28M S36K A67P N157Y",4
"lib2","SARS-CoV-2","TTACCATCAACAATCG",3,0,NA,NA,NA,NA,NA,NA,"stop","F17I D59*",2
"lib2","SARS-CoV-2","TTACCATCTAGTGGGC",2,21.45,6.51,-4.33,0.56,1.5,1.16,0.03,">1 nonsynonymous","L38R D68Q E154N",3
"lib2","SARS-CoV-2","TTACCATGCTACTAAA",9,1.08,NA,NA,NA,NA,NA,NA,"stop","L60S G74A A89* I104* L122S P149N N157S V180N",8
"lib2","SARS-CoV-2","TTACCATGGAAGTCCT",3,1.46,NA,NA,NA,NA,NA,NA,"stop","L57* Q79L D90L D98H Y143C Y165E",6
"lib2","SARS-CoV-2","TTACCATTGCGTATCA",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F12T",1
"lib2","SARS-CoV-2","TTACCATTTAGAGGAC",8,131.91,10.25,-0.58,0.03,2.9,1.03,0,">1 nonsynonymous","L5G F44R",2
"lib2","SARS-CoV-2","TTACCCAAATATTTAT",6,35.34,9.54,-1.3,0.05,3,1.04,0,"1 nonsynonymous","S113T",1
"lib2","SARS-CoV-2","TTACCCAACATTTTAA",4,43.23,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","W106G N118M",2
"lib2","SARS-CoV-2","TTACCCAAGACTGATA",6,88.37,10.18,-0.66,0.08,2.68,1.04,0,">1 nonsynonymous","G83I N120R",2
"lib2","SARS-CoV-2","TTACCCAATATCCAAC",2,1.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112K N130E",2
"lib2","SARS-CoV-2","TTACCCACTACATAGT",1,15.84,10.52,-0.32,0.1,2.67,1.2,0.01,"1 nonsynonymous","K94N",1
"lib2","SARS-CoV-2","TTACCCACTATACTTC",3,143.83,10.55,-0.28,0.05,2.94,1.05,0,">1 nonsynonymous","T46Y S53F",2
"lib2","SARS-CoV-2","TTACCCAGTAAGCATA",7,95.79,10.86,0.02,0.04,2.9,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCCATATCACTCC",1,3.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34N C102Y G155V P169A",4
"lib2","SARS-CoV-2","TTACCCATCACCTCAG",4,27.56,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","C6I T63R K114R R127P",4
"lib2","SARS-CoV-2","TTACCCATCATCATAT",7,80.17,9.51,-1.33,0.1,1.81,1.06,0,">1 nonsynonymous","N1V Q84K W106M N120K K128T",5
"lib2","SARS-CoV-2","TTACCCCATGCATCAG",5,142.68,9.3,-1.54,0.11,1.74,1.12,0,">1 nonsynonymous","D59M D98Y L131V N151S",4
"lib2","SARS-CoV-2","TTACCCCCCACACAGC",2,1.52,NA,NA,NA,NA,NA,NA,"stop","C61* N118V P177*",3
"lib2","SARS-CoV-2","TTACCCCCTAATACCA",2,34.21,10.2,-0.63,0.04,2.89,1.02,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","TTACCCCGCACACGCA",6,184.6,8.25,-2.59,0.11,2.42,1.11,0,">1 nonsynonymous","S41T L122V Y175K",3
"lib2","SARS-CoV-2","TTACCCCTCAACAACG",1,57.04,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","A18L Y66C Y143W",3
"lib2","SARS-CoV-2","TTACCCCTGACGCGGA",3,44.76,6,-4.84,2,1.5,1.15,0.02,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TTACCCCTTGTATATA",1,38.59,10.09,-0.74,0.1,2.05,1.09,0,"1 nonsynonymous","E76G",1
"lib2","SARS-CoV-2","TTACCCGATTGATTGG",4,55.08,8.59,-2.25,0.1,2.97,1.01,0,"1 nonsynonymous","S113Q",1
"lib2","SARS-CoV-2","TTACCCGGGCACCCAT",4,23.73,6,-4.84,2,3,1.11,0,">1 nonsynonymous","T3R R25I F134H E141P",4
"lib2","SARS-CoV-2","TTACCCGGTCCCTCCG",7,11.3,6.89,-3.95,0.58,1.5,1,0.06,">1 nonsynonymous","S43R W106K F156R R179M",4
"lib2","SARS-CoV-2","TTACCCTAAAACTCTG",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21H Y66A",2
"lib2","SARS-CoV-2","TTACCCTAAACAATTG",3,74.63,10.23,-0.61,0.05,2.79,1.07,0,">1 nonsynonymous","L5E V71T A105S T148R",4
"lib2","SARS-CoV-2","TTACCCTAACCAAACA",7,1.18,NA,NA,NA,NA,NA,NA,"stop","F44* Y91H L187Q",3
"lib2","SARS-CoV-2","TTACCCTAAGTTCTTA",2,56.19,10.81,-0.02,0.07,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCCTACAAAACGA",5,204.16,10.31,-0.53,0.03,2.91,1.09,0,"1 nonsynonymous","Y35C",1
"lib2","SARS-CoV-2","TTACCCTAGAAGTACA",4,62.54,9.69,-1.15,0.04,2.94,1.05,0,">1 nonsynonymous","L111I G117A",2
"lib2","SARS-CoV-2","TTACCCTCACGCAAAC",7,41.88,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","D98W D112Q Y119K L162T",4
"lib2","SARS-CoV-2","TTACCCTCAGAAAATA",2,0.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P K87I L95N A105G",4
"lib2","SARS-CoV-2","TTACCCTCCGCCTCAA",5,0,NA,NA,NA,NA,NA,NA,"stop","V52P Q84R Y93* N118L T201L",5
"lib2","SARS-CoV-2","TTACCCTGATAATATA",12,124.8,6.14,-4.7,0.47,1.5,1.16,0.01,">1 nonsynonymous","G9P K48R Y159E S200V",4
"lib2","SARS-CoV-2","TTACCGAAAAAAATAA",9,131.4,10.57,-0.27,0.04,2.97,1.03,0,">1 nonsynonymous","C61R K128F S200H",3
"lib2","SARS-CoV-2","TTACCGAAAAACGATA",1,115.96,9.78,-1.06,0.03,2.92,1.06,0,">1 nonsynonymous","D98Q G146T H189N",3
"lib2","SARS-CoV-2","TTACCGAATTTCCCGG",1,12.41,8.97,-1.87,0.18,1.69,1.01,0.01,">1 nonsynonymous","C31W G83T F160R",3
"lib2","SARS-CoV-2","TTACCGAATTTTATCG",6,63.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10L C49N V77T",3
"lib2","SARS-CoV-2","TTACCGACAATAAATA",11,8.98,NA,NA,NA,NA,NA,NA,"stop","N1R A81T Y123*",3
"lib2","SARS-CoV-2","TTACCGACCTAACGCT",2,17.41,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","S19K S36V F62A F99C C150S S200L",6
"lib2","SARS-CoV-2","TTACCGATAAATTACT",8,251.04,10.84,0.01,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCGATGATCAAGC",2,47.09,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C158V Y165I",2
"lib2","SARS-CoV-2","TTACCGCATATGTCCT",5,0.2,NA,NA,NA,NA,NA,NA,"stop","V20L N24A F99D L131* Y165C",5
"lib2","SARS-CoV-2","TTACCGCCCTAATAAC",1,25.75,10.12,-0.71,0.06,3,1.01,0,"1 nonsynonymous","G155I",1
"lib2","SARS-CoV-2","TTACCGCGAATCCACT",3,10.49,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I2L D59G A67S G152V",4
"lib2","SARS-CoV-2","TTACCGCGGTCGTTAA",1,18.29,7.19,-3.64,0.35,1.5,1.11,0.03,"1 nonsynonymous","C150M",1
"lib2","SARS-CoV-2","TTACCGGCGCGTCTGT",19,5.25,NA,NA,NA,NA,NA,NA,"stop","K56* N130S K198F",3
"lib2","SARS-CoV-2","TTACCGGGAAGGTGAC",2,0.18,NA,NA,NA,NA,NA,NA,"stop","R27Q K48N T85* R179P",4
"lib2","SARS-CoV-2","TTACCGGGGACTACAC",14,109.35,6.12,-4.72,0.68,1.5,1.15,0.01,">1 nonsynonymous","E10I G116P L131S",3
"lib2","SARS-CoV-2","TTACCGGTCCGACGAA",2,10.57,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","I104R T140L",2
"lib2","SARS-CoV-2","TTACCGGTTAAACCAA",2,4.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L N120L K128A N157A",4
"lib2","SARS-CoV-2","TTACCGGTTTTCTCAA",9,2.44,NA,NA,NA,NA,NA,NA,"stop","R27* A105* T140K G152N",4
"lib2","SARS-CoV-2","TTACCGTAAATAAGTT",5,89.27,10.28,-0.56,0.08,2.59,1.05,0,"1 nonsynonymous","V180L",1
"lib2","SARS-CoV-2","TTACCGTACACAAAAA",17,201.24,10.58,-0.26,0.02,2.93,1.06,0,"1 nonsynonymous","G116A",1
"lib2","SARS-CoV-2","TTACCGTCCTTGGGTC",3,15.69,10.8,-0.04,0.07,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCGTGCTAACCGG",8,302.37,9.24,-1.59,0.04,2.15,1.07,0,">1 nonsynonymous","G116L Y178I",2
"lib2","SARS-CoV-2","TTACCGTTAAAAGAAC",4,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19T S41C R179L",3
"lib2","SARS-CoV-2","TTACCGTTACAGGTCA",7,192.48,10.67,-0.16,0.02,2.98,1.04,0,"1 nonsynonymous","R78F",1
"lib2","SARS-CoV-2","TTACCTAAAGACAAAT",1,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3V F62V N92V Q168L",4
"lib2","SARS-CoV-2","TTACCTACCCCGGTAC",5,3.52,NA,NA,NA,NA,NA,NA,"stop","S129* P161T",2
"lib2","SARS-CoV-2","TTACCTAGGCCTACCT",8,201.71,9.38,-1.46,0.08,1.84,1.06,0,">1 nonsynonymous","Y39L R124K K132G",3
"lib2","SARS-CoV-2","TTACCTAGGTTCCATA",24,355.3,10.88,0.04,0.05,2.9,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCTAGTATCTCAA",1,10.14,10.88,0.04,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCTATATGGAGGA",2,14.81,10.81,-0.03,0.07,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCTATGCGATGGA",1,20.65,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","F70K V71E",2
"lib2","SARS-CoV-2","TTACCTATTAAGCCAT",4,0.26,NA,NA,NA,NA,NA,NA,"stop","A89C D97*",2
"lib2","SARS-CoV-2","TTACCTCACGAACAGA",12,162.41,8.4,-2.44,0.11,1.72,1.09,0,">1 nonsynonymous","G9E A22Y N107Q S184Q",4
"lib2","SARS-CoV-2","TTACCTCATCCACATA",5,127.59,9.86,-0.98,0.06,2.7,1.06,0,">1 nonsynonymous","D90L D97C L122S",3
"lib2","SARS-CoV-2","TTACCTCCACTGCGGC",6,89.48,10.22,-0.62,0.01,2.88,1.08,0,">1 nonsynonymous","G9R I138Y",2
"lib2","SARS-CoV-2","TTACCTCGAGCGGATT",6,0.18,NA,NA,NA,NA,NA,NA,"stop","R27K C61S D68E K132* S139W G146F",6
"lib2","SARS-CoV-2","TTACCTCGTCGCGGAA",6,66.56,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E76T W106P",2
"lib2","SARS-CoV-2","TTACCTGAAAAGTGAA",10,173.83,10.76,-0.08,0.04,2.91,1.1,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","TTACCTGCAAACATCT",12,63.97,6.58,-4.26,0.41,1.5,1.18,0.02,">1 nonsynonymous","L95R R136G",2
"lib2","SARS-CoV-2","TTACCTGGTTATATAA",2,22.18,6,-4.84,2,3,1.1,0,">1 nonsynonymous","A18T I28T R73F N92L T100V G152V",6
"lib2","SARS-CoV-2","TTACCTTAAAGTAAAT",7,102.92,10.87,0.04,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACCTTAACGTAAAC",2,118.95,7.3,-3.54,0.12,1.5,1.06,0,">1 nonsynonymous","P54I N120T Q176K",3
"lib2","SARS-CoV-2","TTACCTTAAGGATCAG",2,40.06,10.47,-0.36,0.07,2.87,1.02,0,">1 nonsynonymous","L60M G152V",2
"lib2","SARS-CoV-2","TTACCTTAGGACTTGC",7,89.64,10.84,0,0.04,3,1.03,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","TTACCTTATAAACTGG",1,30.5,8.08,-2.75,0.13,2.69,1.12,0.01,">1 nonsynonymous","A18P L38K C61L L125E",4
"lib2","SARS-CoV-2","TTACCTTATACTGTGA",3,39.39,10.7,-0.14,0.04,2.96,1.05,0,">1 nonsynonymous","R27I K128F",2
"lib2","SARS-CoV-2","TTACCTTGTACCCGTT",10,67.64,8.84,-1.99,0.08,2.81,1.08,0,">1 nonsynonymous","V32C T100L G117I L187S",4
"lib2","SARS-CoV-2","TTACCTTTTAGAACAG",2,46.43,10.71,-0.12,0.04,2.97,1.05,0,"1 nonsynonymous","S129F",1
"lib2","SARS-CoV-2","TTACCTTTTGACCAAT",1,30.6,9.9,-0.94,0.1,2.19,1,0,">1 nonsynonymous","L5P V11D",2
"lib2","SARS-CoV-2","TTACGAAAACAACATT",12,48.23,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6V V77T L95P N107K Q168S",5
"lib2","SARS-CoV-2","TTACGAAATTAAAAAA",2,19.49,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","S41C K48R L57C F99I",4
"lib2","SARS-CoV-2","TTACGAAATTTGTACA",6,3.84,NA,NA,NA,NA,NA,NA,"stop","A42* C61Y R78V G83V S139R G166S S200*",7
"lib2","SARS-CoV-2","TTACGAACAATTTAAA",3,41.54,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","L95Q S113Y G174C",3
"lib2","SARS-CoV-2","TTACGAACATATTGGT",7,131.38,10.75,-0.08,0.04,2.91,1.09,0,"1 nonsynonymous","S139R",1
"lib2","SARS-CoV-2","TTACGAACATTACACG",5,66.9,9.55,-1.28,0.12,1.78,1.06,0.01,">1 nonsynonymous","A14V S29K F134R",3
"lib2","SARS-CoV-2","TTACGAACGTGAACTG",8,77.61,10.9,0.06,0.06,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTACGAACTATACTAT",1,34.6,10.74,-0.1,0.06,3,1.01,0,">1 nonsynonymous","T3A G83L",2
"lib2","SARS-CoV-2","TTACGAAGTTGTTTTG",10,98.77,6,-4.84,1.57,1.5,1.19,0.03,">1 nonsynonymous","A89F F126H E135G",3
"lib2","SARS-CoV-2","TTACGAATAGCCGAAA",4,72.46,10.28,-0.56,0.04,3,1,0,"1 nonsynonymous","V65R",1
"lib2","SARS-CoV-2","TTACGAATTGATTGAT",6,63.97,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","T100Y N120M Y143P",3
"lib2","SARS-CoV-2","TTACGACAGTCAAGCA",1,15.38,9.87,-0.97,0.07,2.73,1,0,">1 nonsynonymous","G83M N107Q",2
"lib2","SARS-CoV-2","TTACGACATACCAATC",21,1.95,NA,NA,NA,NA,NA,NA,"stop","D68* G86M",2
"lib2","SARS-CoV-2","TTACGACATGTTGATT",1,33.47,10.61,-0.22,0.04,2.88,1.12,0,">1 nonsynonymous","F8L P96S",2
"lib2","SARS-CoV-2","TTACGACATTCGATAA",4,106.12,10.89,0.06,0.06,2.88,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACGACCTAGAACAA",16,16.53,NA,NA,NA,NA,NA,NA,"stop","N40G E154*",2
"lib2","SARS-CoV-2","TTACGACGAAAATTAC",13,208.61,10.56,-0.28,0.03,2.93,1.07,0,">1 nonsynonymous","G152L K199R",2
"lib2","SARS-CoV-2","TTACGACGCCAATCAG",6,26.97,8.02,-2.81,0.4,1.5,1.19,0.04,">1 nonsynonymous","C6G V11R A14Y A42F L187D",5
"lib2","SARS-CoV-2","TTACGACTATCGCCGC",2,0.13,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","TTACGACTTCAGAAGT",8,19.62,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","A33R I104S",2
"lib2","SARS-CoV-2","TTACGAGAAAAAAATA",2,0.23,NA,NA,NA,NA,NA,NA,"stop","G51H D59* E141M S184T",4
"lib2","SARS-CoV-2","TTACGAGACACCTTGC",1,11.85,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6L S41L L60N P197A",4
"lib2","SARS-CoV-2","TTACGAGATACAGCGC",17,410.54,10.82,-0.01,0.04,2.97,1.04,0,"1 nonsynonymous","P54T",1
"lib2","SARS-CoV-2","TTACGAGGTTTCTTTC",3,36.38,10.73,-0.11,0.04,2.99,1.02,0,">1 nonsynonymous","C61R T100I",2
"lib2","SARS-CoV-2","TTACGATAGATTGAAA",3,0.56,NA,NA,NA,NA,NA,NA,"stop","C6L K56E C195* K199I",4
"lib2","SARS-CoV-2","TTACGATATAAAAAGG",4,16.01,8.06,-2.78,0.33,1.5,1.1,0.03,">1 nonsynonymous","N13Y C61A T100K G117R",4
"lib2","SARS-CoV-2","TTACGATCCGTCCTTA",3,77.73,6,-4.84,1.63,1.5,1.1,0.01,">1 nonsynonymous","L5G K94C W106C P197T",4
"lib2","SARS-CoV-2","TTACGATTACCAGGAT",1,0,NA,NA,NA,NA,NA,NA,"stop","F17H G166*",2
"lib2","SARS-CoV-2","TTACGATTATCACTAT",5,118.06,10.59,-0.24,0.04,2.97,1.03,0,">1 nonsynonymous","G9F T15P V173Y T201M",4
"lib2","SARS-CoV-2","TTACGATTCTATCGAT",2,5.55,8.94,-1.9,0.2,1.9,1,0.01,">1 nonsynonymous","S41N C49Y V103A",3
"lib2","SARS-CoV-2","TTACGATTGCTTATCA",2,12.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9T N13I N110G G146S N151V T201S",6
"lib2","SARS-CoV-2","TTACGCAAAACTATAA",2,6.17,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40E F99G N107L D112S",4
"lib2","SARS-CoV-2","TTACGCAAACTATCCG",1,12.06,6.46,-4.37,0.58,1.5,1.1,0.04,">1 nonsynonymous","F44R L60M Y175K",3
"lib2","SARS-CoV-2","TTACGCAAACTGCTAC",5,72.24,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","V37L K56Q L131G L162T",4
"lib2","SARS-CoV-2","TTACGCAACTGTATTA",5,58.01,10.89,0.06,0.05,2.94,1.08,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","TTACGCAATCGAAGTC",6,131.59,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C31R N151V G172D",3
"lib2","SARS-CoV-2","TTACGCAATTAGTTAT",4,23.18,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","P82A Y91M P96L Y123A",4
"lib2","SARS-CoV-2","TTACGCACGAACCAGA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","F12D R27*",2
"lib2","SARS-CoV-2","TTACGCAGGATGGTGC",20,0.08,NA,NA,NA,NA,NA,NA,"stop","D98* V103* D112K",3
"lib2","SARS-CoV-2","TTACGCAGTCGCCTGA",5,66.78,10.28,-0.56,0.07,2.81,1.08,0,"1 nonsynonymous","G174F",1
"lib2","SARS-CoV-2","TTACGCATCATGCGGT",8,3.5,NA,NA,NA,NA,NA,NA,"stop","C49* G101A",2
"lib2","SARS-CoV-2","TTACGCCAACAACATA",2,18.67,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","C6N F99R S113I",3
"lib2","SARS-CoV-2","TTACGCCACAACATGC",1,37.88,9.37,-1.46,0.33,1.5,1,0.05,">1 nonsynonymous","A14V N58T N120P T170S",4
"lib2","SARS-CoV-2","TTACGCCACATTTATT",3,47.72,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","E10N Y119I F167P",3
"lib2","SARS-CoV-2","TTACGCCATGAAAAAC",6,65.46,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","C61N Y91R A105P Y121S P149C",5
"lib2","SARS-CoV-2","TTACGCCGTAAGTGAT",3,63.75,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y35M F167P",2
"lib2","SARS-CoV-2","TTACGCCTAAATTCCT",1,47.19,9.28,-1.55,0.1,1.55,1.05,0.01,">1 nonsynonymous","L5P K56F W106L",3
"lib2","SARS-CoV-2","TTACGCGACTAATCCT",15,124.5,10.75,-0.08,0.02,2.99,1.02,0,">1 nonsynonymous","N120M S129V",2
"lib2","SARS-CoV-2","TTACGCGCATTACTTC",2,1.92,NA,NA,NA,NA,NA,NA,"stop","E10* V103N G116M",3
"lib2","SARS-CoV-2","TTACGCGCTAAAATCA",4,32.33,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N30Q V103C L131Y",3
"lib2","SARS-CoV-2","TTACGCGGTATCGAGT",4,38.58,10.72,-0.12,0.05,3,1.01,0,"1 nonsynonymous","R78C",1
"lib2","SARS-CoV-2","TTACGCGGTGAGTAAC",2,17.13,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","R136E P161H",2
"lib2","SARS-CoV-2","TTACGCGTTTCACTAA",9,119.84,10.36,-0.48,0.04,2.85,1.05,0,">1 nonsynonymous","L5E T15F N120G",3
"lib2","SARS-CoV-2","TTACGCTGGGTCTCAC",4,62.75,10.67,-0.16,0.02,2.94,1.07,0,">1 nonsynonymous","Y39I S129R I138A",3
"lib2","SARS-CoV-2","TTACGCTGTATAGCTG",3,0,NA,NA,NA,NA,NA,NA,"stop","A14C F44*",2
"lib2","SARS-CoV-2","TTACGGAACACTAACT",4,31.56,10.76,-0.08,0.05,2.95,1.07,0,">1 nonsynonymous","C61R T100C",2
"lib2","SARS-CoV-2","TTACGGAACTGAATTA",3,44.25,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T46I G155V P161I",3
"lib2","SARS-CoV-2","TTACGGAATATCTATG",1,24.59,10.69,-0.14,0.06,2.93,1.07,0,">1 nonsynonymous","I2M L60T",2
"lib2","SARS-CoV-2","TTACGGACCACACCAA",20,256.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","K48R N92I S129N Y159F Q168V",5
"lib2","SARS-CoV-2","TTACGGATGTGATACA",2,14.91,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D59L I80F T148Y",3
"lib2","SARS-CoV-2","TTACGGCCCATTCTTA",8,3.18,NA,NA,NA,NA,NA,NA,"stop","Y35L F99P V103* Q168Y E186Y",5
"lib2","SARS-CoV-2","TTACGGGGTATACAGT",9,145.21,10.58,-0.26,0.04,2.92,1.06,0,">1 nonsynonymous","D90A V115L S129N S200G",4
"lib2","SARS-CoV-2","TTACGGTAAGCCATTA",2,22.93,8.67,-2.17,0.19,2.4,1.04,0.02,">1 nonsynonymous","S41D T85P K128N G166F",4
"lib2","SARS-CoV-2","TTACGGTCAAAATCTA",2,6.98,6.48,-4.36,0.09,1.68,1,0,">1 nonsynonymous","P96H N120M L131Q",3
"lib2","SARS-CoV-2","TTACGGTCACATGCAA",1,31.32,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","P82Q Y93F",2
"lib2","SARS-CoV-2","TTACGTAACAAGAACT",8,110.41,10.28,-0.56,0.04,2.8,1.03,0,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","TTACGTAACCACACTT",2,35.26,7.55,-3.29,0.22,1.5,1.05,0.02,">1 nonsynonymous","S43A N107I N151S",3
"lib2","SARS-CoV-2","TTACGTACTGTGTACC",1,2.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","TTACGTAGAGGGCAAT",10,3.32,NA,NA,NA,NA,NA,NA,"stop","E10C A33K S41E K56* W106S E141* I142N",7
"lib2","SARS-CoV-2","TTACGTATAAAATAGT",2,41.19,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","V32L V37W I80S A105F R136N",5
"lib2","SARS-CoV-2","TTACGTATAAATTGGG",5,50.86,6,-4.84,1.39,3,1.06,0,">1 nonsynonymous","K87E F167E",2
"lib2","SARS-CoV-2","TTACGTCAAGTAGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","P82A N92P R124S T140*",4
"lib2","SARS-CoV-2","TTACGTCCTACGATGC",3,6.33,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S36P C49Y",2
"lib2","SARS-CoV-2","TTACGTGAACCACCAA",4,21.89,10.81,-0.03,0.06,2.99,1.01,0,">1 nonsynonymous","T55F K199P",2
"lib2","SARS-CoV-2","TTACGTGACTACGGAA",5,71.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I2T F167V",2
"lib2","SARS-CoV-2","TTACGTGGACTAATTA",1,0.92,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G86F",1
"lib2","SARS-CoV-2","TTACGTTCGGGTAAGA",7,3.43,NA,NA,NA,NA,NA,NA,"stop","L38* Y91P W106L",3
"lib2","SARS-CoV-2","TTACGTTGTACCCACG",1,14.65,6,-4.84,1.6,1.5,1.05,0.01,">1 nonsynonymous","P82L D98E T170N",3
"lib2","SARS-CoV-2","TTACGTTTAAAAGAAC",2,67.82,10.27,-0.57,0.27,1.65,1.07,0.03,">1 nonsynonymous","S113N G155M",2
"lib2","SARS-CoV-2","TTACGTTTATTCTCAG",7,58.96,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F12C T46P E141Y",3
"lib2","SARS-CoV-2","TTACGTTTTTAGACTG",3,51.05,9.8,-1.04,0.11,2.24,1.07,0.01,">1 nonsynonymous","V11A S41L S200F",3
"lib2","SARS-CoV-2","TTACGTTTTTGTTACG",5,1,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105P",1
"lib2","SARS-CoV-2","TTACTAAAAATAACCT",9,79.42,8.31,-2.53,0.09,1.8,1.09,0,">1 nonsynonymous","S43W G83V Y91M",3
"lib2","SARS-CoV-2","TTACTAAAAATATACG",2,67.18,6,-4.84,2,2.2,1.12,0,">1 nonsynonymous","R78Y Y91T N157C C195D",4
"lib2","SARS-CoV-2","TTACTAAATGCACTTC",5,55.14,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14L N40V D90L R136M",4
"lib2","SARS-CoV-2","TTACTAACACATTCCC",9,49.17,6,-4.84,2,1.5,1.29,0.02,">1 nonsynonymous","G51H Q84V F126D F160T",4
"lib2","SARS-CoV-2","TTACTAACATAACAGA",7,71.09,10.42,-0.42,0.04,2.88,1.09,0,">1 nonsynonymous","N40P E154G",2
"lib2","SARS-CoV-2","TTACTAAGAGTTTTAT",3,11.64,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","L95N I104T S113A S129T",4
"lib2","SARS-CoV-2","TTACTAAGCCTATCAA",5,109.6,10.75,-0.09,0.07,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACTAAGCGACGCGT",1,63.96,8.47,-2.36,0.1,2.78,1.12,0,">1 nonsynonymous","N4K S147Y Q168V G174T",4
"lib2","SARS-CoV-2","TTACTAAGGTAGTACC",1,5.42,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","S43I G86D G117K S164F",4
"lib2","SARS-CoV-2","TTACTAAGTATTCGGT",5,33.68,9.88,-0.95,0.1,2.09,1,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TTACTAAGTCACGCTT",3,24.35,6.6,-4.24,0.35,1.5,1.08,0.02,">1 nonsynonymous","D34Q F47K R136S F167G",4
"lib2","SARS-CoV-2","TTACTAAGTGAGTTAT",19,166.28,9.32,-1.52,0.04,2.87,1.08,0,">1 nonsynonymous","G9T T55Y Y119G",3
"lib2","SARS-CoV-2","TTACTAATCGAATTAA",13,338.59,10.71,-0.13,0.03,2.93,1.07,0,">1 nonsynonymous","R16E N120L",2
"lib2","SARS-CoV-2","TTACTAATTCTTACAC",4,62.8,10.03,-0.81,0.06,2.54,1.09,0,">1 nonsynonymous","W23Y V173G",2
"lib2","SARS-CoV-2","TTACTACAAGTCAAAA",4,18.02,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","S41Y K128S A145K Y175C V181L A190S",6
"lib2","SARS-CoV-2","TTACTACAAGTTACAG",3,10.82,6.08,-4.75,0.77,3,1.18,0.01,">1 nonsynonymous","E10W K94V V103T F160L",4
"lib2","SARS-CoV-2","TTACTACAATTCAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27K C61S D68E K132* S139W G146F",6
"lib2","SARS-CoV-2","TTACTACATTTCCTTA",5,90.94,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N40V C61V F70H D97S S139M F160I",6
"lib2","SARS-CoV-2","TTACTACCACGACCTA",21,4.74,NA,NA,NA,NA,NA,NA,"stop","V20E C49R D68* S113E K132V S184R T201P",7
"lib2","SARS-CoV-2","TTACTACCAGAACAAC",2,4.76,NA,NA,NA,NA,NA,NA,"stop","P7F P149*",2
"lib2","SARS-CoV-2","TTACTACCTGGTCGAT",1,74.61,6,-4.84,2,3,1.19,0,">1 nonsynonymous","E76K Y91K F126A",3
"lib2","SARS-CoV-2","TTACTACGCTGGGATA",1,12.43,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","Y21V G51V P82L F160T",4
"lib2","SARS-CoV-2","TTACTACTAAACATCC",6,2.34,NA,NA,NA,NA,NA,NA,"stop","D112T T140*",2
"lib2","SARS-CoV-2","TTACTACTATCACCAT",6,32.4,9.5,-1.34,0.15,2.19,1.13,0.01,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","TTACTACTATTACACT",14,319.88,10.82,-0.02,0.03,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACTAGAACGCGAAA",3,61.86,10.26,-0.58,0.06,2.91,1.06,0,">1 nonsynonymous","K87N F160A",2
"lib2","SARS-CoV-2","TTACTAGAAGCATTAC",6,51.42,9.55,-1.29,0.07,1.85,1.04,0,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","TTACTAGCTTAAATTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R27* Y50L N58P V103S N107E",5
"lib2","SARS-CoV-2","TTACTAGGTCTCCCAT",9,0.17,NA,NA,NA,NA,NA,NA,"stop","A42* G152A",2
"lib2","SARS-CoV-2","TTACTAGTACGGGCAG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10N K128*",2
"lib2","SARS-CoV-2","TTACTAGTAGAGCCTT",6,33.11,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","P7H A89R W106R",3
"lib2","SARS-CoV-2","TTACTAGTCTTTGAAG",1,42.8,10.25,-0.59,0.05,2.83,1.08,0,">1 nonsynonymous","G51T F160S",2
"lib2","SARS-CoV-2","TTACTATACCCCTCTA",10,158.88,10.84,0,0.06,2.96,1.06,0,">1 nonsynonymous","V37R T201S",2
"lib2","SARS-CoV-2","TTACTATATTCCCTGC",2,0.47,NA,NA,NA,NA,NA,NA,"stop","P54T S69M N120* Q168G",4
"lib2","SARS-CoV-2","TTACTATCGGGAACGT",2,26.23,10.94,0.1,0.07,2.97,1.06,0,">1 nonsynonymous","L5P S43A",2
"lib2","SARS-CoV-2","TTACTATGGCGACTGA",4,94.12,10.78,-0.05,0.04,2.95,1.07,0,"1 nonsynonymous","F8Y",1
"lib2","SARS-CoV-2","TTACTATTAGTCTCAA",1,15.87,9.92,-0.91,0.12,2.3,1,0.01,">1 nonsynonymous","T3K P7M N58F",3
"lib2","SARS-CoV-2","TTACTCAACCGACGTG",2,17.98,10.76,-0.08,0.06,3,1.02,0,"1 nonsynonymous","A33G",1
"lib2","SARS-CoV-2","TTACTCAACTTTAAAA",1,1.17,NA,NA,NA,NA,NA,NA,"stop","A81K Y123*",2
"lib2","SARS-CoV-2","TTACTCACATGACAAC",1,6.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L K199S",2
"lib2","SARS-CoV-2","TTACTCACGACCCGGT",12,153.29,10.76,-0.08,0.03,2.97,1.06,0,"1 nonsynonymous","D97V",1
"lib2","SARS-CoV-2","TTACTCAGCCGAAAAA",3,32.93,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S19T C61N F99S C158H R179P",5
"lib2","SARS-CoV-2","TTACTCAGTAAGGACT",6,0.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35V C49M E141A Q168R",4
"lib2","SARS-CoV-2","TTACTCATAGAGAATG",4,40.09,9.03,-1.8,0.15,1.6,1.13,0.01,">1 nonsynonymous","T3S S19Y",2
"lib2","SARS-CoV-2","TTACTCATCCATAAAA",1,32.71,10.2,-0.63,0.1,2.81,1.02,0.01,">1 nonsynonymous","L5Y S69F",2
"lib2","SARS-CoV-2","TTACTCATTCAAATAT",6,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73S C158M F167S",3
"lib2","SARS-CoV-2","TTACTCCAGCGGTATC",4,25.5,9.14,-1.7,0.05,2.95,1.05,0,"1 nonsynonymous","Q168C",1
"lib2","SARS-CoV-2","TTACTCCATAAACCAG",2,16.29,7.03,-3.8,0.34,1.71,1.22,0.03,">1 nonsynonymous","G101L E135P",2
"lib2","SARS-CoV-2","TTACTCCATGGCTGAG",4,14.87,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","G74D D75F I88T E141F T170H",5
"lib2","SARS-CoV-2","TTACTCCGATCTAATG",10,157.36,10.2,-0.64,0.05,2.76,1.03,0,">1 nonsynonymous","N30K S43A D98Y",3
"lib2","SARS-CoV-2","TTACTCGATTCCTCTC",6,35.07,6.1,-4.74,0.53,1.5,1.11,0.01,">1 nonsynonymous","T85K S113N Y165S",3
"lib2","SARS-CoV-2","TTACTCGTTGCGAACT",6,1.01,NA,NA,NA,NA,NA,NA,"stop","S43* D112L",2
"lib2","SARS-CoV-2","TTACTCTAAAAAGTTT",3,55.96,8.28,-2.56,0.11,2.2,1.02,0.01,">1 nonsynonymous","F8M K87A N118Y Q144E",4
"lib2","SARS-CoV-2","TTACTCTAAATTCCGG",1,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5I Y91T F99V K114F R136P",5
"lib2","SARS-CoV-2","TTACTCTCACACGAAC",3,56.73,10.2,-0.64,0.03,2.76,1.08,0,">1 nonsynonymous","P54S F62T G152Y",3
"lib2","SARS-CoV-2","TTACTCTCAGCATGTA",3,34.89,7,-3.84,0.58,1.5,1.12,0.05,">1 nonsynonymous","C61P F70L Q84D Y119I G152F",5
"lib2","SARS-CoV-2","TTACTCTCTAGCATCG",9,47.97,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","R73A R179L",2
"lib2","SARS-CoV-2","TTACTCTGATACAATG",1,30.88,10.79,-0.05,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACTCTGGCGTAATG",9,11.74,NA,NA,NA,NA,NA,NA,"stop","E10* Y50S I88N",3
"lib2","SARS-CoV-2","TTACTCTTACAACATA",6,73.47,8.77,-2.06,0.07,2.02,1.08,0,">1 nonsynonymous","P54D F134L S139G Q168M",4
"lib2","SARS-CoV-2","TTACTCTTGGACACAA",1,15.57,6,-4.84,1.6,3,1.09,0.01,">1 nonsynonymous","C6Y N40M R124A L131H",4
"lib2","SARS-CoV-2","TTACTCTTGTCACACT",2,8.27,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","T15N A33T Y39F N64Y P96R L122W R127L F134L",8
"lib2","SARS-CoV-2","TTACTGAATCCACAAT",4,68.23,6,-4.84,2,2.44,1.16,0,">1 nonsynonymous","F44L T85Y K94Y F99V I138D R179K",6
"lib2","SARS-CoV-2","TTACTGACGTTAAACA",1,13.37,9.95,-0.89,0.12,2.12,1.08,0.01,">1 nonsynonymous","F12L K26V A105W K128S",4
"lib2","SARS-CoV-2","TTACTGAGCCATCATG",2,25.84,10.61,-0.23,0.05,2.77,1.24,0,">1 nonsynonymous","G9Y Q84M N120E V173L",4
"lib2","SARS-CoV-2","TTACTGATCCCAGGTT",5,82.84,10.9,0.07,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTACTGCAAATATCTC",6,90.56,10.8,-0.04,0.03,2.91,1.08,0,">1 nonsynonymous","I2E D97G",2
"lib2","SARS-CoV-2","TTACTGCCCCTTAATA",5,58.24,8.71,-2.12,0.09,2.34,1.06,0,">1 nonsynonymous","L57G G83F Q168T",3
"lib2","SARS-CoV-2","TTACTGCTAAAATAAA",6,223.93,10.7,-0.14,0.04,2.93,1.08,0,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","TTACTGCTTCACAAAT",7,36.84,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","G51T A105V Y119L S147V",4
"lib2","SARS-CoV-2","TTACTGGACACACATT",1,23.48,11.04,0.2,0.1,2.86,1.13,0,"1 nonsynonymous","K114Q",1
"lib2","SARS-CoV-2","TTACTGGATCACACGC",3,19.12,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","S69G Y121Q E135R T201P",4
"lib2","SARS-CoV-2","TTACTGGCTCCGGACA",9,110.17,7.04,-3.79,0.14,1.74,1.11,0,"1 nonsynonymous","Q168P",1
"lib2","SARS-CoV-2","TTACTGTAATCCATAG",6,40.78,10.8,-0.04,0.05,2.89,1.15,0,"1 nonsynonymous","I138E",1
"lib2","SARS-CoV-2","TTACTGTACTAAGTGC",6,25.51,6,-4.84,1.33,1.5,1.14,0.02,">1 nonsynonymous","Y35C G116R I138A E154N",4
"lib2","SARS-CoV-2","TTACTGTGAAAATTCA",3,16.92,6,-4.84,2,1.5,1.15,0.08,">1 nonsynonymous","L5T A22R I28E I72K K87M S200Y",6
"lib2","SARS-CoV-2","TTACTGTTTCCCAAAG",2,5.8,9.2,-1.63,0.2,2.01,1.03,0.01,">1 nonsynonymous","I2S A14D L57R",3
"lib2","SARS-CoV-2","TTACTTAACAGCAGGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R27N A42* D90F I104L V173R",5
"lib2","SARS-CoV-2","TTACTTAATAGAAAGC",2,3.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y21Q V32K Y91F E186C",4
"lib2","SARS-CoV-2","TTACTTACAATCCGAA",2,43.99,8.45,-2.39,0.13,2.64,1.04,0.01,">1 nonsynonymous","C6W Q168D",2
"lib2","SARS-CoV-2","TTACTTACAGTTGAAA",5,0.7,NA,NA,NA,NA,NA,NA,"stop","C61R S129* Q168A",3
"lib2","SARS-CoV-2","TTACTTACCAATAAGC",6,27.79,10.87,0.03,0.23,2.69,1.11,0.01,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","TTACTTATAATACCTG",7,73.25,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V71G I138C A192T",3
"lib2","SARS-CoV-2","TTACTTATAATCAAGC",1,18.05,10.28,-0.55,0.08,2.82,1.1,0.01,">1 nonsynonymous","G9W D98Y",2
"lib2","SARS-CoV-2","TTACTTATACCAAAAA",6,55.63,11.03,0.2,0.05,2.94,1.06,0,">1 nonsynonymous","T3S L122G",2
"lib2","SARS-CoV-2","TTACTTATCACAAATG",2,22.83,10.73,-0.1,0.09,2.92,1.13,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","TTACTTATGATCCAAT",2,1.61,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTACTTCCTACAAGAT",3,41.83,9.67,-1.17,0.08,2.74,1.02,0,">1 nonsynonymous","L5V R16K R136C V153E G174H",5
"lib2","SARS-CoV-2","TTACTTCTGACTGCAT",4,0.45,NA,NA,NA,NA,NA,NA,"stop","E10I G86E D98M R124S Y159*",5
"lib2","SARS-CoV-2","TTACTTCTTGAAATTA",1,9.76,10.83,0,0.06,3,1.04,0,"1 nonsynonymous","N58R",1
"lib2","SARS-CoV-2","TTACTTGATTTACCTA",3,52.52,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C31L A105D N157A",3
"lib2","SARS-CoV-2","TTACTTGGGAATGGTG",3,71.33,6,-4.84,2,3,1.16,0,">1 nonsynonymous","L60F P177K",2
"lib2","SARS-CoV-2","TTACTTGGTTCACGTT",3,30.25,10.48,-0.36,0.08,2.91,1.1,0,"1 nonsynonymous","G152Y",1
"lib2","SARS-CoV-2","TTACTTGTCCTACCCT",3,36.05,10.74,-0.09,0.05,3,1,0,"1 nonsynonymous","S53F",1
"lib2","SARS-CoV-2","TTACTTGTCTATGTAA",4,27.82,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","R124S S129N Y143D",3
"lib2","SARS-CoV-2","TTACTTGTTATTAGAG",7,20.39,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","Q84F N107Q F160I V182Q H189N",5
"lib2","SARS-CoV-2","TTACTTTAAATGATAA",10,0.05,NA,NA,NA,NA,NA,NA,"stop","V32A F44M G83I F99N L122* L131N Y143P",7
"lib2","SARS-CoV-2","TTACTTTCATGCCCAA",13,163.67,10.17,-0.67,0.04,2.97,1.03,0,">1 nonsynonymous","V37S T46S I142H",3
"lib2","SARS-CoV-2","TTACTTTCTCGACCCG",2,11.09,6.39,-4.45,0.87,1.5,1.12,0.05,">1 nonsynonymous","V52T Y91A D98N D112I",4
"lib2","SARS-CoV-2","TTACTTTGAAAATACT",2,0.9,NA,NA,NA,NA,NA,NA,"stop","C6Y S29* S41* V65M I72V Y91P K114L",7
"lib2","SARS-CoV-2","TTACTTTGAGTAAGGT",2,26.84,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L38H V103L A145C",3
"lib2","SARS-CoV-2","TTACTTTGGCAGACTT",22,3.92,NA,NA,NA,NA,NA,NA,"stop","L38* T55H G83R K94H G152V",5
"lib2","SARS-CoV-2","TTACTTTGGCTAATCT",2,59.07,10.87,0.04,0.05,2.94,1.08,0,"1 nonsynonymous","N4E",1
"lib2","SARS-CoV-2","TTAGAAAAAAGTGCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","I2G E10M C31T D59A P96* N157M",6
"lib2","SARS-CoV-2","TTAGAAAAAATATGAA",4,52.69,10.82,-0.01,0.06,2.85,1.15,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAGAAAAAATCGTTA",7,1.8,NA,NA,NA,NA,NA,NA,"stop","N58* P82L Y178M",3
"lib2","SARS-CoV-2","TTAGAAAAACATAAAC",10,649.77,10.87,0.04,0.04,2.95,1.07,0,">1 nonsynonymous","L188N P197E",2
"lib2","SARS-CoV-2","TTAGAAAAACGTCAAT",3,47.94,10.63,-0.21,0.07,2.83,1.03,0,"1 nonsynonymous","A145V",1
"lib2","SARS-CoV-2","TTAGAAAAAGTGATAG",13,160.16,10.84,0,0.04,2.89,1.12,0,"1 nonsynonymous","L5N",1
"lib2","SARS-CoV-2","TTAGAAAACCATCGGT",3,21.67,6,-4.84,1.49,1.5,1.17,0.02,">1 nonsynonymous","N24A A89H P149Y N171L",4
"lib2","SARS-CoV-2","TTAGAAAAGATTAAGA",2,7.5,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","C6G F99T Y119M G166V N171V V180D S200L",7
"lib2","SARS-CoV-2","TTAGAAAAGGAGTAAG",1,6.49,10.59,-0.24,0.13,3,1,0,">1 nonsynonymous","L5W E10R",2
"lib2","SARS-CoV-2","TTAGAAAATATTATAG",6,38.68,10.77,-0.07,0.09,2.8,1.1,0,">1 nonsynonymous","R16Y N24E A42Y D75S T201S",5
"lib2","SARS-CoV-2","TTAGAAAATTATACAC",3,10.32,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","S43V T63M P96M C102L K198R",5
"lib2","SARS-CoV-2","TTAGAAAATTCATGTT",8,116.74,10.62,-0.21,0.06,2.95,1.06,0,"1 nonsynonymous","E10G",1
"lib2","SARS-CoV-2","TTAGAAACAGCGTGAT",2,4.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95P",1
"lib2","SARS-CoV-2","TTAGAAACAGTCATAA",4,0.88,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","TTAGAAACATAGATCG",2,57.94,10.85,0.01,0.06,2.94,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGAAACCAATTAAT",1,10.54,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","K87V C102G T148E R179I T201I",5
"lib2","SARS-CoV-2","TTAGAAACTGATAAAT",8,13.93,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","T15P K56V P96L",3
"lib2","SARS-CoV-2","TTAGAAAGCAACCTCC",10,130.63,10.4,-0.43,0.39,1.61,1.04,0.07,">1 nonsynonymous","N4I E10V C49F K56H Y119A",5
"lib2","SARS-CoV-2","TTAGAAAGCACCGATC",3,31.66,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G101C G116K G146N",3
"lib2","SARS-CoV-2","TTAGAAAGGTATGGTT",6,1.74,NA,NA,NA,NA,NA,NA,"stop","Y143*",1
"lib2","SARS-CoV-2","TTAGAAAGGTTTCACT",7,57.17,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D98F L122R Q168P V180W",4
"lib2","SARS-CoV-2","TTAGAAAGTGTTCAAC",1,2.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96S F156R",2
"lib2","SARS-CoV-2","TTAGAAATAAGAGTCT",2,0,NA,NA,NA,NA,NA,NA,"stop","S19K K26* S45A R136M",4
"lib2","SARS-CoV-2","TTAGAAATAGAGCCAC",3,49.09,9.53,-1.3,0.11,2.75,1,0,">1 nonsynonymous","A14S A33Y S41A T46R T170F",5
"lib2","SARS-CoV-2","TTAGAAATGTCTCCTA",1,0.23,NA,NA,NA,NA,NA,NA,"stop","C31Y W106*",2
"lib2","SARS-CoV-2","TTAGAACAAAGGAAAT",3,70.83,10.68,-0.15,0.05,2.99,1.04,0,"1 nonsynonymous","Y39H",1
"lib2","SARS-CoV-2","TTAGAACACAACATAG",3,31.15,6.78,-4.06,0.51,1.56,1.24,0.04,">1 nonsynonymous","F70G S113N N118V",3
"lib2","SARS-CoV-2","TTAGAACACACTCAGC",7,44.66,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A42G T63M F99P C102S I138R G152R",6
"lib2","SARS-CoV-2","TTAGAACACTCCTTAT",4,0.21,NA,NA,NA,NA,NA,NA,"stop","L5T D90Y D97P P149* P169V P177T",6
"lib2","SARS-CoV-2","TTAGAACATATAGGAG",1,47.48,10.72,-0.12,0.08,2.83,1.17,0,">1 nonsynonymous","I2S C61L",2
"lib2","SARS-CoV-2","TTAGAACATTTTAGAT",3,3.19,NA,NA,NA,NA,NA,NA,"stop","A81R V115H Y119L Y165N G174L T201*",6
"lib2","SARS-CoV-2","TTAGAACCTCACGCTA",3,13.71,7.35,-3.48,0.35,1.52,1.26,0.04,">1 nonsynonymous","L5T R73T A81E Y91I F126L Q168S",6
"lib2","SARS-CoV-2","TTAGAACGGATTAAGA",1,29.67,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","F47S T55V G172K",3
"lib2","SARS-CoV-2","TTAGAACGGCCTACGT",2,106.7,10.17,-0.67,0.04,2.82,1,0,">1 nonsynonymous","T55G W106Y",2
"lib2","SARS-CoV-2","TTAGAACTACACAATT",1,19.68,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","K56T Y93T G146F Y178W",4
"lib2","SARS-CoV-2","TTAGAACTCTGAAAAG",10,35.55,7.12,-3.71,0.27,1.5,1.05,0.02,">1 nonsynonymous","W106S G155I",2
"lib2","SARS-CoV-2","TTAGAACTTACAACTG",18,285.79,10.53,-0.3,0.04,2.89,1.1,0,">1 nonsynonymous","E10L D97L",2
"lib2","SARS-CoV-2","TTAGAACTTAGCTAAC",7,0.57,NA,NA,NA,NA,NA,NA,"stop","C6* L131F V173I",3
"lib2","SARS-CoV-2","TTAGAAGAATCTACCC",8,84.17,10.66,-0.18,0.04,2.96,1,0,"1 nonsynonymous","S184L",1
"lib2","SARS-CoV-2","TTAGAAGACCGCGCTA",2,21.68,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","I88R S129F E141L",3
"lib2","SARS-CoV-2","TTAGAAGATGGAGTAA",2,0.31,NA,NA,NA,NA,NA,NA,"stop","F8L G9K Q144* N171I",4
"lib2","SARS-CoV-2","TTAGAAGCCCCCGTGG",2,12.34,6,-4.84,2,1.5,1.03,0.02,">1 nonsynonymous","Y39L F44P D90C D137Q",4
"lib2","SARS-CoV-2","TTAGAAGCCTTAATAA",9,88.51,8.82,-2.02,0.21,1.5,1.02,0.02,">1 nonsynonymous","V37C V77K",2
"lib2","SARS-CoV-2","TTAGAAGCTAACCGCT",1,2.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24R S41N G101D",3
"lib2","SARS-CoV-2","TTAGAAGCTATGGCCT",8,36.38,9.08,-1.76,0.21,2.01,1.15,0.01,">1 nonsynonymous","S41L D97G Y165F",3
"lib2","SARS-CoV-2","TTAGAAGCTGCGGGCA",1,4.31,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTAGAAGGATTCTACA",3,48.49,10.17,-0.66,0.11,2.27,1.12,0.01,">1 nonsynonymous","D90S Y178T L188Y S200W",4
"lib2","SARS-CoV-2","TTAGAATAAACGAAAT",5,45.37,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36K D90R L125P F167A",4
"lib2","SARS-CoV-2","TTAGAATAAGCAATTG",1,10.3,7.63,-3.21,0.32,1.5,1.1,0.02,">1 nonsynonymous","S129Y I138L G146A G155P L183F",5
"lib2","SARS-CoV-2","TTAGAATACACCATAA",1,28.53,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","A81C Y123D",2
"lib2","SARS-CoV-2","TTAGAATAGTACTGAA",26,5.26,NA,NA,NA,NA,NA,NA,"stop","V11I S36D L131*",3
"lib2","SARS-CoV-2","TTAGAATAGTTGAGCA",4,115.37,6.17,-4.67,0.48,1.5,1.15,0.01,"1 nonsynonymous","R179N",1
"lib2","SARS-CoV-2","TTAGAATATACCTCGC",2,0.73,NA,NA,NA,NA,NA,NA,"stop","V32W T55* V103* G116F",4
"lib2","SARS-CoV-2","TTAGAATCACGTTGCG",11,85.91,8.67,-2.17,0.25,1.5,1.01,0.03,">1 nonsynonymous","Y21H L60P D98V",3
"lib2","SARS-CoV-2","TTAGAATCAGCCCAAA",3,19.8,9.17,-1.66,0.36,1.5,1,0.07,">1 nonsynonymous","W23R Y66N N130P",3
"lib2","SARS-CoV-2","TTAGAATCATCCGCCG",4,15.24,6,-4.84,2,3,1.12,0,">1 nonsynonymous","Y50N R73T G83P",3
"lib2","SARS-CoV-2","TTAGAATCCTAAAACA",4,39,10.66,-0.18,0.05,2.91,1.11,0,">1 nonsynonymous","V65F S129N E154S",3
"lib2","SARS-CoV-2","TTAGAATCGAATGCAC",8,225.37,10.86,0.03,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGAATCGACGAGTT",1,13.37,9.46,-1.38,0.17,2.11,1.11,0.01,">1 nonsynonymous","K87S W106N L122K",3
"lib2","SARS-CoV-2","TTAGAATGTTACCTTG",6,48.71,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V32S L57G F99I",3
"lib2","SARS-CoV-2","TTAGAATTATTAATAT",8,58.1,10.78,-0.05,0.04,2.97,1.01,0,"1 nonsynonymous","D59K",1
"lib2","SARS-CoV-2","TTAGAATTTCTTCCCA",6,31.35,10.8,-0.04,0.06,2.92,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGACAAAACTTCAT",7,0.52,NA,NA,NA,NA,NA,NA,"stop","A42L S200*",2
"lib2","SARS-CoV-2","TTAGACAAACACGGGT",5,1.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6V A14F T140R",3
"lib2","SARS-CoV-2","TTAGACAACAACTTGT",4,36.51,7.96,-2.88,0.25,1.57,1.1,0.02,">1 nonsynonymous","D112L G155E",2
"lib2","SARS-CoV-2","TTAGACAAGACCAAAT",5,88.39,6,-4.84,1.25,1.5,1.13,0.02,">1 nonsynonymous","A33K E135T G172Q P197S",4
"lib2","SARS-CoV-2","TTAGACAATCCTGTAT",1,28.79,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T3S V37D I88Y F156C",4
"lib2","SARS-CoV-2","TTAGACACAAGGAACG",3,4.07,NA,NA,NA,NA,NA,NA,"stop","C6W G83N I88* F99*",4
"lib2","SARS-CoV-2","TTAGACACCATAAAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A22L P54Y G74V N92C N107E",5
"lib2","SARS-CoV-2","TTAGACACGAATTATA",2,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M D90R N107R Q163V L183T",5
"lib2","SARS-CoV-2","TTAGACACGTAAACTG",1,17.59,9.8,-1.03,0.11,2.1,1.1,0.01,">1 nonsynonymous","D90V P149T",2
"lib2","SARS-CoV-2","TTAGACAGACAACTTG",8,103.15,10.85,0.01,0.05,2.94,1.08,0,"1 nonsynonymous","S200V",1
"lib2","SARS-CoV-2","TTAGACATAGTCCAGG",2,68.71,10.75,-0.08,0.03,3,1.01,0,"1 nonsynonymous","C61V",1
"lib2","SARS-CoV-2","TTAGACCACAAGCAAG",5,22.85,8.52,-2.32,0.27,1.5,1.02,0.03,">1 nonsynonymous","A14P K56I Q79E T201H",4
"lib2","SARS-CoV-2","TTAGACCACGCCAAAA",2,7.86,NA,NA,NA,NA,NA,0.09,"wildtype","",0
"lib2","SARS-CoV-2","TTAGACCAGACTCACA",6,13.17,10.63,-0.2,0.07,3,1.02,0,">1 nonsynonymous","N40S C61Y L188M",3
"lib2","SARS-CoV-2","TTAGACCCACGGAATG",6,53.8,8.71,-2.13,0.1,1.83,1.09,0,">1 nonsynonymous","F44Y R127L",2
"lib2","SARS-CoV-2","TTAGACCGCAGGCAAC",3,0.34,NA,NA,NA,NA,NA,NA,"stop","P161*",1
"lib2","SARS-CoV-2","TTAGACCTCGCCTGAG",5,35.15,6,-4.84,1.23,3,1.37,0.01,">1 nonsynonymous","S19L P96H Y121D N157T",4
"lib2","SARS-CoV-2","TTAGACGATGCCCAGG",13,172.25,10.26,-0.58,0.04,2.85,1.04,0,"1 nonsynonymous","G51A",1
"lib2","SARS-CoV-2","TTAGACGCCTCGATTG",2,28.15,7.1,-3.73,0.33,1.5,1.01,0.02,">1 nonsynonymous","N58S V77Q N120W T148W",4
"lib2","SARS-CoV-2","TTAGACGCGCAGCAGC",1,17.85,9.43,-1.41,0.39,1.52,1,0.07,">1 nonsynonymous","D90A F99I",2
"lib2","SARS-CoV-2","TTAGACGCTAGATATG",10,67.34,8.51,-2.33,0.1,2.42,1.03,0,">1 nonsynonymous","N58P V71L G117S",3
"lib2","SARS-CoV-2","TTAGACGTTTGAGAAA",4,47.52,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","F8L W23E C150S",3
"lib2","SARS-CoV-2","TTAGACTAACGAGGAA",6,0.63,NA,NA,NA,NA,NA,NA,"stop","N64E G146*",2
"lib2","SARS-CoV-2","TTAGACTAACTTGGGA",4,102.99,10.82,-0.01,0.03,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGACTAGTACTTAC",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S G101A K114E",3
"lib2","SARS-CoV-2","TTAGACTGGTAAACTG",6,109.36,10.88,0.05,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGACTTAAAAAAAA",5,25.91,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T63S Y121D L125F P133G",4
"lib2","SARS-CoV-2","TTAGACTTAAGTCACC",3,33.59,10.89,0.05,0.06,2.97,1.06,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TTAGACTTCAGAACAA",18,366.79,8.68,-2.15,0.07,3,1.04,0,">1 nonsynonymous","C61K Y119P S129H N171L",4
"lib2","SARS-CoV-2","TTAGACTTTTGAAACC",5,11.54,NA,NA,NA,NA,NA,NA,"stop","S19R F44D F62M T100Y N110A L162*",6
"lib2","SARS-CoV-2","TTAGACTTTTTATTAC",1,26.15,8.09,-2.75,0.18,2.03,1.02,0.01,">1 nonsynonymous","F12V S113C E154M",3
"lib2","SARS-CoV-2","TTAGAGAAGTGCATCA",5,133.44,10.8,-0.03,0.04,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGAGAATGAAGATC",2,23.59,8.95,-1.88,0.11,2.38,1.07,0.01,">1 nonsynonymous","D98G I142S",2
"lib2","SARS-CoV-2","TTAGAGACAACGTTAA",1,5.34,NA,NA,NA,NA,NA,NA,"stop","R16Q C49D Q84W I104* F134M Y175C",6
"lib2","SARS-CoV-2","TTAGAGACCGCATAAA",2,43.02,10.36,-0.48,0.07,2.82,1.04,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","TTAGAGACCGTTCAAG",1,24.77,10.74,-0.1,0.09,2.84,1.19,0,"1 nonsynonymous","N130C",1
"lib2","SARS-CoV-2","TTAGAGAGCTATGTAC",4,0,NA,NA,NA,NA,NA,NA,"stop","P7* S41E I104T P177Y",4
"lib2","SARS-CoV-2","TTAGAGAGTCCTCTAC",5,56.84,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I88P K94E G116N F134Q S200A",5
"lib2","SARS-CoV-2","TTAGAGATAGCTGTAA",2,9.98,6.45,-4.39,0.58,3,1.32,0.01,">1 nonsynonymous","N1D K94D T100M I138V",4
"lib2","SARS-CoV-2","TTAGAGATCTAAACAG",9,48.25,8.07,-2.76,0.18,1.89,1.09,0.01,">1 nonsynonymous","S41D T46V T55I G74R V153P",5
"lib2","SARS-CoV-2","TTAGAGATTTATTCAG",2,14.31,9.51,-1.33,0.34,2.21,1,0.04,">1 nonsynonymous","S43D C61K S69L R78V",4
"lib2","SARS-CoV-2","TTAGAGCAGAACAACG",3,49.89,10.33,-0.5,0.05,3,1.01,0,"1 nonsynonymous","G155C",1
"lib2","SARS-CoV-2","TTAGAGCCGTAGGGAT",6,114.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K48T Y93S S129D",3
"lib2","SARS-CoV-2","TTAGAGCGCATTGTCA",8,196.07,9.99,-0.85,0.08,2.49,1.02,0,">1 nonsynonymous","F12V L60W",2
"lib2","SARS-CoV-2","TTAGAGGACGACCTTT",7,76.23,10.53,-0.3,0.05,2.95,1.04,0,"1 nonsynonymous","N58L",1
"lib2","SARS-CoV-2","TTAGAGGACTGCAATT",10,154.97,9.84,-1,0.04,2.69,1.07,0,">1 nonsynonymous","S36I K87L L122V E186A",4
"lib2","SARS-CoV-2","TTAGAGGCGGTCAAAG",2,1.42,NA,NA,NA,NA,NA,NA,"stop","A33R S41* D90F N151L",4
"lib2","SARS-CoV-2","TTAGAGTAAACATAAG",4,32.73,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","P7T Y91D P149L C158D P197D",5
"lib2","SARS-CoV-2","TTAGAGTAATTGATTT",1,9.23,NA,NA,NA,NA,NA,0.28,">1 nonsynonymous","I2S D59W F99Y N120F N151P",5
"lib2","SARS-CoV-2","TTAGAGTGGCCCCCAC",2,33.94,10.25,-0.59,0.06,2.91,1,0,">1 nonsynonymous","Y91L E141P",2
"lib2","SARS-CoV-2","TTAGAGTGTCCTAAGG",2,47.01,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N4T N13R N30H Y143G R179K",5
"lib2","SARS-CoV-2","TTAGAGTTCGGATATA",7,46.1,8.06,-2.77,0.17,1.64,1.1,0.01,">1 nonsynonymous","R73N P133K",2
"lib2","SARS-CoV-2","TTAGATAAAAACTCGC",10,12.52,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","S19R W23Y A42S D137Y N171Y",5
"lib2","SARS-CoV-2","TTAGATAAATAGTTTA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","L95* G196M",2
"lib2","SARS-CoV-2","TTAGATAACCCGGAAT",10,9.1,NA,NA,NA,NA,NA,NA,"stop","G116* Q176W P191H",3
"lib2","SARS-CoV-2","TTAGATAACGGAACGC",4,14.16,6,-4.84,2,3,1.28,0.04,">1 nonsynonymous","D90K G155S Y175K F185M",4
"lib2","SARS-CoV-2","TTAGATAACTATGACG",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8L G83F",2
"lib2","SARS-CoV-2","TTAGATAAGTTGCGCG",2,20.6,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F12H P82L E135W G155R",4
"lib2","SARS-CoV-2","TTAGATACAACACTCC",3,2.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75P A89E D98L",3
"lib2","SARS-CoV-2","TTAGATACACCAACCA",1,5.76,10.22,-0.61,0.14,2.7,1.04,0.01,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","TTAGATACAGAGAACG",5,32.73,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6P L95A Y165A",3
"lib2","SARS-CoV-2","TTAGATACAGTTGTCA",5,24.09,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","P82M D98L G116A N130L",4
"lib2","SARS-CoV-2","TTAGATACATACACAG",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* V103L K128Y",3
"lib2","SARS-CoV-2","TTAGATACCAGAATAT",5,156.94,8.49,-2.35,0.11,2.76,1.12,0,">1 nonsynonymous","L5M Y175S",2
"lib2","SARS-CoV-2","TTAGATACCGGGGAAT",2,14.3,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S41W Y50N D98I N120G",4
"lib2","SARS-CoV-2","TTAGATACTACAGACA",14,44.85,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","E10V T100N I104T V181F",4
"lib2","SARS-CoV-2","TTAGATACTATAACTA",5,293.91,6,-4.84,0.96,1.5,1.12,0.01,">1 nonsynonymous","A105K N157G",2
"lib2","SARS-CoV-2","TTAGATAGAACTAGTG",3,20.85,10.51,-0.33,0.08,2.89,1.08,0,">1 nonsynonymous","I2V T55L D98V",3
"lib2","SARS-CoV-2","TTAGATAGACAAGCTT",1,15.13,10.33,-0.5,0.09,2.65,1.19,0,"1 nonsynonymous","D34S",1
"lib2","SARS-CoV-2","TTAGATAGCGTTACGG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106T D112R F126H A145V V181P",5
"lib2","SARS-CoV-2","TTAGATAGGAATATGG",8,116.27,10.89,0.05,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGATAGGCCGGCCA",3,23.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F17P C49D G83F",3
"lib2","SARS-CoV-2","TTAGATAGTAAGCTCT",7,127.29,10.63,-0.21,0.03,2.96,1.02,0,"1 nonsynonymous","S45K",1
"lib2","SARS-CoV-2","TTAGATAGTCATTTTT",8,67.27,6,-4.84,0.93,2.59,1.17,0.01,">1 nonsynonymous","G101P Y121L",2
"lib2","SARS-CoV-2","TTAGATAGTCCTACAT",14,2.07,NA,NA,NA,NA,NA,NA,"stop","K48S D90Y C158H Y175*",4
"lib2","SARS-CoV-2","TTAGATATAAGCTGAA",1,20.62,8.45,-2.39,0.12,2.81,1.04,0.01,">1 nonsynonymous","L38I Y143S",2
"lib2","SARS-CoV-2","TTAGATATCATTATAG",10,105.28,6,-4.84,1.64,1.5,1.19,0.02,">1 nonsynonymous","Y50L C158S Y178H",3
"lib2","SARS-CoV-2","TTAGATATGAAAGAAC",2,5.9,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54S C102G N107S P197K",4
"lib2","SARS-CoV-2","TTAGATCAAAATCACC",3,36.12,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9V K56D D112L I138G P169G",5
"lib2","SARS-CoV-2","TTAGATCAAACAATAA",3,49.04,6.65,-4.19,0.31,1.5,1.11,0.01,">1 nonsynonymous","C61A C158D",2
"lib2","SARS-CoV-2","TTAGATCAACCCATAT",2,42.05,9.96,-0.88,0.12,2.37,1,0.01,">1 nonsynonymous","L5R R27P A89T",3
"lib2","SARS-CoV-2","TTAGATCACTATTAAA",6,74.99,10.78,-0.05,0.03,2.84,1.16,0,">1 nonsynonymous","N4G L122M",2
"lib2","SARS-CoV-2","TTAGATCACTATTGAT",3,32.64,8.94,-1.89,0.07,2.56,1.1,0,">1 nonsynonymous","F62V N107D P191S",3
"lib2","SARS-CoV-2","TTAGATCAGTAACGGA",10,0.72,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y35L",1
"lib2","SARS-CoV-2","TTAGATCATAGGCCGT",1,20.34,9.86,-0.97,0.16,2,1,0.02,">1 nonsynonymous","N40I K94A I142L",3
"lib2","SARS-CoV-2","TTAGATCATGAGATTC",2,34.14,10.62,-0.21,0.05,2.98,1,0,">1 nonsynonymous","P54S C61L",2
"lib2","SARS-CoV-2","TTAGATCCAATGCTAC",1,23.72,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","Y91V D98V S139Q",3
"lib2","SARS-CoV-2","TTAGATCTATCAACTG",5,75.13,9.93,-0.91,0.08,2.24,1,0,">1 nonsynonymous","V11T R27W A33L",3
"lib2","SARS-CoV-2","TTAGATCTCTCCCTCA",5,83.61,9.92,-0.91,0.07,2.46,1.07,0,">1 nonsynonymous","T15N F62M K132L V173Y T201D",5
"lib2","SARS-CoV-2","TTAGATCTGCAGAGTT",6,13.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L5V N13H N64S F99C E141W Y175V",6
"lib2","SARS-CoV-2","TTAGATCTGGAAAAAA",2,37.9,10.82,-0.02,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGATGAACTTATAT",2,60.77,10.49,-0.34,0.08,2.87,1.08,0,"1 nonsynonymous","S36Y",1
"lib2","SARS-CoV-2","TTAGATGAACTTTTAT",2,30.03,9.78,-1.06,0.1,2.17,1.05,0.01,">1 nonsynonymous","L111V D137S",2
"lib2","SARS-CoV-2","TTAGATGAGTGTGTAA",11,2.07,NA,NA,NA,NA,NA,NA,"stop","Q84*",1
"lib2","SARS-CoV-2","TTAGATGTACAGCTTC",4,16.8,6.07,-4.77,1.17,1.5,1.18,0.03,">1 nonsynonymous","K94E K114F",2
"lib2","SARS-CoV-2","TTAGATGTTTAAATAA",9,91.65,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P7I S36A G51C G86S",4
"lib2","SARS-CoV-2","TTAGATTAAGAGCCTT",9,5.03,NA,NA,NA,NA,NA,NA,"stop","C6* Y93N E141C Q176L",4
"lib2","SARS-CoV-2","TTAGATTCATTAATAC",10,185.84,10.18,-0.66,0.06,2.55,1.02,0,">1 nonsynonymous","C102M K128P L188E",3
"lib2","SARS-CoV-2","TTAGATTCTAATCGTA",7,44.65,8,-2.84,0.27,1.5,1.09,0.02,">1 nonsynonymous","L38S G117S",2
"lib2","SARS-CoV-2","TTAGATTGAAAAATCG",1,33.49,10.92,0.08,0.06,2.85,1.16,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","TTAGATTGTACTGACG",1,0,NA,NA,NA,NA,NA,NA,"stop","V37* S113R R179S L187Q",4
"lib2","SARS-CoV-2","TTAGCAAAAGGAATCG",9,78.49,10.22,-0.62,0.05,2.88,1.04,0,">1 nonsynonymous","P54N I142F",2
"lib2","SARS-CoV-2","TTAGCAAACCTTAATA",4,23.24,10.22,-0.62,0.07,3,1,0,"1 nonsynonymous","C6G",1
"lib2","SARS-CoV-2","TTAGCAAACTTCTCTC",2,13.83,6,-4.84,2,1.5,1.16,0.05,">1 nonsynonymous","S19A P96G C102M S113G T148S",5
"lib2","SARS-CoV-2","TTAGCAAATAAAATAT",5,43.4,10.7,-0.14,0.06,2.99,1.03,0,">1 nonsynonymous","N1I D90N",2
"lib2","SARS-CoV-2","TTAGCAACACACGTGT",11,39.02,6,-4.84,2,1.5,1.32,0.06,">1 nonsynonymous","T3K G9C D68K Q168Y",4
"lib2","SARS-CoV-2","TTAGCAACCGGCTACC",5,21.53,6.4,-4.43,0.5,1.5,1.07,0.01,">1 nonsynonymous","N4D R136S F167L",3
"lib2","SARS-CoV-2","TTAGCAAGAAGCTCCA",5,32.63,6,-4.84,2,1.5,1.29,0.06,">1 nonsynonymous","I104N P161Q",2
"lib2","SARS-CoV-2","TTAGCAAGGATGGCGA",4,6.14,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","G9Y F44S P133W V182Q",4
"lib2","SARS-CoV-2","TTAGCAATAGAACATA",1,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T46Q D97L D112E S139A Q144S",5
"lib2","SARS-CoV-2","TTAGCACAGTAAGAAG",3,12.81,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A14I N30F L60H P82W A145T N171S V182S",7
"lib2","SARS-CoV-2","TTAGCACCCCAAGTAC",4,0,NA,NA,NA,NA,NA,NA,"stop","S129*",1
"lib2","SARS-CoV-2","TTAGCACCTGAATCAC",4,46.37,10.03,-0.81,0.13,2.49,1.18,0.01,">1 nonsynonymous","E135R G146S",2
"lib2","SARS-CoV-2","TTAGCACCTTGAATAG",15,324.73,10.6,-0.24,0.04,2.91,1.06,0,">1 nonsynonymous","L60K S164M",2
"lib2","SARS-CoV-2","TTAGCACGTAAAGATA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","A22* E141R Q176R",3
"lib2","SARS-CoV-2","TTAGCACTGGAATAAA",4,28.22,8.12,-2.71,0.23,1.73,1.03,0.02,">1 nonsynonymous","T3P I80C G174K",3
"lib2","SARS-CoV-2","TTAGCACTGTAAAATA",10,2.58,NA,NA,NA,NA,NA,NA,"stop","N4F T46L T55L N64M V77M Y121* K198N",7
"lib2","SARS-CoV-2","TTAGCACTTCTAAAAA",12,109.74,6,-4.84,1.72,1.5,1.13,0.02,">1 nonsynonymous","T85A L131R",2
"lib2","SARS-CoV-2","TTAGCACTTGCTCTGG",8,9.28,6,-4.84,2,3,1.12,0.04,">1 nonsynonymous","R16I L95H G174W",3
"lib2","SARS-CoV-2","TTAGCACTTGTACATA",9,311.32,8.35,-2.49,0.1,2.34,1.1,0,">1 nonsynonymous","C49W P149G G166Q",3
"lib2","SARS-CoV-2","TTAGCAGAACTATACC",3,39.23,9.7,-1.14,0.07,2.58,1.12,0,">1 nonsynonymous","K94L K114Q V153S P197V",4
"lib2","SARS-CoV-2","TTAGCAGACGGGTAAT",5,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13M A42S Y119L E186L",4
"lib2","SARS-CoV-2","TTAGCAGAGTCTGAAC",5,29.57,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","V37T F44L Y50H L162Q",4
"lib2","SARS-CoV-2","TTAGCAGCTGTTCAGA",3,35.82,10.29,-0.54,0.07,2.84,1.13,0,">1 nonsynonymous","T15D N120K K128L",3
"lib2","SARS-CoV-2","TTAGCAGTGGCGAGAG",6,94.01,10.9,0.06,0.05,2.94,1.08,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","TTAGCATAAGGAGATA",12,139.83,6,-4.84,2,3,1.14,0,">1 nonsynonymous","V37D V71E G86R E141I",4
"lib2","SARS-CoV-2","TTAGCATACTTCCAAG",3,87.77,10.74,-0.09,0.07,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGCATCATAGGGTT",2,64.28,10.01,-0.82,0.08,2.39,1.06,0,">1 nonsynonymous","F47T A67C",2
"lib2","SARS-CoV-2","TTAGCATCATTAACCG",2,13.89,8.71,-2.13,0.18,1.5,1.06,0.02,">1 nonsynonymous","Y35K L57A D75K K132M T201K",5
"lib2","SARS-CoV-2","TTAGCATCCTTAGTAG",2,6.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I K26P D90N S139I",4
"lib2","SARS-CoV-2","TTAGCATCTAAACGAA",2,64.06,10.73,-0.11,0.07,2.97,1.03,0,">1 nonsynonymous","L57I L122E",2
"lib2","SARS-CoV-2","TTAGCATGGAAGGCTA",4,94.67,9.21,-1.62,0.03,2.84,1.06,0,"1 nonsynonymous","G117H",1
"lib2","SARS-CoV-2","TTAGCATGGCCGCCAT",1,1.26,NA,NA,NA,NA,NA,NA,"stop","V52T F62* T148Q",3
"lib2","SARS-CoV-2","TTAGCATGTCCAATTT",8,74.67,9.96,-0.88,0.08,2.59,1.06,0,">1 nonsynonymous","A42V T46K Q144H",3
"lib2","SARS-CoV-2","TTAGCATTAACTAACA",4,61.78,10.31,-0.52,0.02,2.95,1.06,0,">1 nonsynonymous","K56H K87G N120Q",3
"lib2","SARS-CoV-2","TTAGCATTCGCCTTAC",1,17.45,10.01,-0.83,0.08,2.48,1,0,">1 nonsynonymous","T100Y W106R",2
"lib2","SARS-CoV-2","TTAGCATTCTCGCAAT",25,401.69,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y119S C150I T201G",3
"lib2","SARS-CoV-2","TTAGCCACCAAAGGGC",3,30.98,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","N92R I142S C158R T201Y",4
"lib2","SARS-CoV-2","TTAGCCACCCTCTAAA",9,137.97,8.56,-2.28,0.09,2.04,1.11,0,">1 nonsynonymous","C6W G152C",2
"lib2","SARS-CoV-2","TTAGCCAGAATTTTTA",8,37.96,6,-4.84,1.66,3,1.15,0,">1 nonsynonymous","I2K T15I V20G D137G",4
"lib2","SARS-CoV-2","TTAGCCAGCGCCGTCA",14,70.99,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23R T100F S108M",3
"lib2","SARS-CoV-2","TTAGCCATAACTAAAG",2,23.86,6,-4.84,2,1.5,1.2,0.02,"1 nonsynonymous","F167E",1
"lib2","SARS-CoV-2","TTAGCCATTCAAAGCT",6,76.98,10.68,-0.16,0.05,2.95,1.06,0,"1 nonsynonymous","K26H",1
"lib2","SARS-CoV-2","TTAGCCATTTGCTGAT",2,24.32,7.8,-3.03,0.46,1.5,1,0.07,">1 nonsynonymous","R25G S43P E76T K128Q H189G",5
"lib2","SARS-CoV-2","TTAGCCCATCAACTAA",2,8.77,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","F12L Y50V A105N P149G V153L",5
"lib2","SARS-CoV-2","TTAGCCCCGCACAAAT",4,94.49,10.82,-0.02,0.06,2.89,1.09,0,"1 nonsynonymous","K132Q",1
"lib2","SARS-CoV-2","TTAGCCCGCCATGCTT",2,17.31,8.26,-2.57,0.21,1.67,1.1,0.02,">1 nonsynonymous","A18L D34W",2
"lib2","SARS-CoV-2","TTAGCCCTATTGTGAT",3,16.5,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","F44V W106K R136Q E154G",4
"lib2","SARS-CoV-2","TTAGCCCTCGACAAAG",2,47.2,8.63,-2.21,0.12,2.99,1.08,0,"1 nonsynonymous","F126A",1
"lib2","SARS-CoV-2","TTAGCCCTTCGTCTTG",8,3.07,NA,NA,NA,NA,NA,NA,"stop","G83V D97F G155*",3
"lib2","SARS-CoV-2","TTAGCCGAAACTGGTA",3,0,NA,NA,NA,NA,NA,NA,"stop","L57S D90G T148M C195*",4
"lib2","SARS-CoV-2","TTAGCCGAAATATGGA",10,0.84,NA,NA,NA,NA,NA,NA,"stop","C6V K48A C61* P133V F167P",5
"lib2","SARS-CoV-2","TTAGCCGAAGCGATAG",5,55.51,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","W106D R127V",2
"lib2","SARS-CoV-2","TTAGCCGAGACGCACT",2,57.88,10.73,-0.11,0.06,2.89,1.13,0,">1 nonsynonymous","G152A T201M",2
"lib2","SARS-CoV-2","TTAGCCGCAACAACGC",15,98.15,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L5R E76Y G86W T100K S113M G146I",6
"lib2","SARS-CoV-2","TTAGCCGCTGACACGA",4,48.17,10.51,-0.32,0.03,3,1.01,0,">1 nonsynonymous","A145I L187S",2
"lib2","SARS-CoV-2","TTAGCCGGACAAACTA",5,52.78,9.96,-0.88,0.09,2.8,1,0,">1 nonsynonymous","C31E T63G Q84E S129K",4
"lib2","SARS-CoV-2","TTAGCCGGTACATAGG",4,37.8,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N64S V180S",2
"lib2","SARS-CoV-2","TTAGCCGTATTACGCT",3,37,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","E10I K26P D90N S139I",4
"lib2","SARS-CoV-2","TTAGCCTATAAAATCT",3,68.89,6.25,-4.58,0.39,2.49,1.17,0.01,">1 nonsynonymous","T55D T85N C150L C158Y",4
"lib2","SARS-CoV-2","TTAGCCTATTAAACAA",4,74.58,10.76,-0.08,0.05,2.97,1.02,0,"1 nonsynonymous","N110W",1
"lib2","SARS-CoV-2","TTAGCCTATTTTTAAC",7,1.41,NA,NA,NA,NA,NA,NA,"stop","K128*",1
"lib2","SARS-CoV-2","TTAGCCTCATCTATAG",4,86.76,10.9,0.06,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGCCTTATATTCGT",3,28.35,6.89,-3.94,0.61,1.5,1.26,0.06,">1 nonsynonymous","A33H G86D S113R",3
"lib2","SARS-CoV-2","TTAGCCTTGAAGTAAT",17,10.49,NA,NA,NA,NA,NA,NA,"stop","E10K L122*",2
"lib2","SARS-CoV-2","TTAGCGAATCGAAGAA",4,16.86,7.68,-3.15,0.3,1.5,1.21,0.02,"1 nonsynonymous","A105R",1
"lib2","SARS-CoV-2","TTAGCGACGCGTGTCC",1,27.95,9.87,-0.97,0.12,2.35,1,0,">1 nonsynonymous","V77I A89C N110W",3
"lib2","SARS-CoV-2","TTAGCGAGACAGGCTG",1,5.98,6,-4.84,2,3,1.02,0,"1 nonsynonymous","N92T",1
"lib2","SARS-CoV-2","TTAGCGCAAAAACTTT",18,41.26,6.42,-4.41,0.71,1.5,1.14,0.04,">1 nonsynonymous","N13P S108P",2
"lib2","SARS-CoV-2","TTAGCGCATTATCTAA",10,85.75,8.18,-2.65,0.11,2.17,1.06,0.01,">1 nonsynonymous","G83S I142S P149L",3
"lib2","SARS-CoV-2","TTAGCGCCTGACTTGC",2,9.08,7.06,-3.78,0.8,1.5,1.07,0.03,">1 nonsynonymous","F44L D59V N120T R124H T170K",5
"lib2","SARS-CoV-2","TTAGCGCGCAATTCTA",3,31.26,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y21K Y39V L60P Q163S",4
"lib2","SARS-CoV-2","TTAGCGGAAAATCCCT",2,1.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R T15Q V77S K87M Q168H",5
"lib2","SARS-CoV-2","TTAGCGGAGATGATGC",1,10.24,6,-4.84,2,3,1.31,0.04,">1 nonsynonymous","C6P P96F Y123F",3
"lib2","SARS-CoV-2","TTAGCGGCCAAGAAGA",7,1.17,NA,NA,NA,NA,NA,NA,"stop","C61M D90H P96R K114* P149E",5
"lib2","SARS-CoV-2","TTAGCGGCGCATACTA",2,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106S S184L",2
"lib2","SARS-CoV-2","TTAGCGGGATCTAAAA",8,149.6,10.04,-0.8,0.05,2.64,1,0,"1 nonsynonymous","R136F",1
"lib2","SARS-CoV-2","TTAGCGTAAAGTAATA",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTAGCGTCTTAATAAG",9,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTAGCGTTAATATGCA",8,2.79,NA,NA,NA,NA,NA,NA,"stop","Y39A C61G D90N D98A L131Y Q176* S200L",7
"lib2","SARS-CoV-2","TTAGCTAAGCGACTGG",4,94.43,8.49,-2.34,0.07,2.08,1.1,0,">1 nonsynonymous","F62T Y91V Q168T",3
"lib2","SARS-CoV-2","TTAGCTAAGGAACCGA",11,93.76,10.68,-0.15,0.03,2.91,1.08,0,"1 nonsynonymous","G83L",1
"lib2","SARS-CoV-2","TTAGCTAATACACAGT",11,241.23,10.84,0.01,0.07,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGCTACTACGTATC",1,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2M N40L N120L",3
"lib2","SARS-CoV-2","TTAGCTACTCAATCAA",3,11.84,9.47,-1.36,0.15,1.84,1.04,0.02,">1 nonsynonymous","V65F K114R K132L L183V",4
"lib2","SARS-CoV-2","TTAGCTAGTACAATTA",4,5.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4H T15F K56A A105H",4
"lib2","SARS-CoV-2","TTAGCTATAGACGGGG",3,45.42,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S41R E76I T170I",3
"lib2","SARS-CoV-2","TTAGCTATGATAAGGA",2,43.71,10.34,-0.49,0.05,2.83,1,0,">1 nonsynonymous","G83Y T100S",2
"lib2","SARS-CoV-2","TTAGCTATGCTCGGAT",1,74.11,9.29,-1.54,0.05,2.93,1.05,0,">1 nonsynonymous","N4L D98E T170N P197L",4
"lib2","SARS-CoV-2","TTAGCTCAATCATGAC",7,56.04,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N107S K132T F167V",3
"lib2","SARS-CoV-2","TTAGCTCATCCTGGCC",1,11.55,6.11,-4.73,1.68,3,1.09,0.01,">1 nonsynonymous","N40I N107I N157K",3
"lib2","SARS-CoV-2","TTAGCTCCACAGTCTA",8,24.66,6.73,-4.1,0.49,1.5,1.22,0.04,">1 nonsynonymous","Q84L D112L",2
"lib2","SARS-CoV-2","TTAGCTCGATAGAATG",10,56.72,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25E A42S Q84S P96L R127L",5
"lib2","SARS-CoV-2","TTAGCTCTATGTAAAA",1,11.18,10.95,0.11,0.09,3,1.02,0,">1 nonsynonymous","I2V C61V",2
"lib2","SARS-CoV-2","TTAGCTCTCAAATATA",17,204.22,10.74,-0.1,0.06,2.84,1.04,0,"1 nonsynonymous","E141F",1
"lib2","SARS-CoV-2","TTAGCTCTCAATTCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","L5* D34L Y93N I104C",4
"lib2","SARS-CoV-2","TTAGCTCTCATACCGT",1,6.9,6,-4.84,2,3,1.07,0,">1 nonsynonymous","A14L Q144L S164V",3
"lib2","SARS-CoV-2","TTAGCTCTCTGGACAA",1,20.16,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","S19R L95P",2
"lib2","SARS-CoV-2","TTAGCTGAAATAGCAA",1,23.78,9.7,-1.14,0.04,2.95,1.06,0,">1 nonsynonymous","S29A L125P",2
"lib2","SARS-CoV-2","TTAGCTGGAAATCATG",1,0.64,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TTAGCTGGCGAAACTT",4,12.23,10.16,-0.68,0.11,2.86,1.06,0.01,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","TTAGCTGTTATAAAAA",17,2.92,NA,NA,NA,NA,NA,NA,"stop","A14S A22F N92* G146A",4
"lib2","SARS-CoV-2","TTAGCTTAACCAAAAA",3,17.37,6.9,-3.93,0.37,1.5,1.13,0.02,">1 nonsynonymous","V103M T170W",2
"lib2","SARS-CoV-2","TTAGCTTAATACGCCT",3,32.11,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","T3N A18L L38S F44T Y91L L188H",6
"lib2","SARS-CoV-2","TTAGCTTAGAATTTCA",2,1.25,NA,NA,NA,NA,NA,NA,"stop","W106S L162*",2
"lib2","SARS-CoV-2","TTAGCTTTCATCATGA",5,84.2,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F44T D90A E135P",3
"lib2","SARS-CoV-2","TTAGGAAACCACCTTG",2,24,6.07,-4.76,1.19,1.5,1.17,0.02,">1 nonsynonymous","N130K Y143K V180N",3
"lib2","SARS-CoV-2","TTAGGAAACTAATTAA",3,4.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16E W23G D98C N110V",4
"lib2","SARS-CoV-2","TTAGGAAAGAGATAGT",1,15.41,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Q79R F99Q G155L",3
"lib2","SARS-CoV-2","TTAGGAAATGAGAATA",2,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96Q K114M R136L Q176N",4
"lib2","SARS-CoV-2","TTAGGAAATTATTAAA",17,197.91,10.25,-0.58,0.04,2.77,1.02,0,">1 nonsynonymous","S41P Y123V",2
"lib2","SARS-CoV-2","TTAGGAACCATCGCAA",2,15.85,10.05,-0.79,0.14,2.27,1.06,0.01,">1 nonsynonymous","F62K D97R T140L",3
"lib2","SARS-CoV-2","TTAGGAACTAGTTAAG",8,35.41,8.03,-2.81,0.5,1.5,1,0.07,">1 nonsynonymous","L95S G117S E141C T201L",4
"lib2","SARS-CoV-2","TTAGGAACTGCCGGCA",1,3.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63A Q84D N157V G166V",4
"lib2","SARS-CoV-2","TTAGGAACTGGTACAA",2,5.89,NA,NA,NA,NA,NA,NA,"stop","P82* R179G S200P",3
"lib2","SARS-CoV-2","TTAGGAATAGATGTGG",1,64.39,10.65,-0.18,0.05,2.94,1.05,0,">1 nonsynonymous","S45K P54I T148K",3
"lib2","SARS-CoV-2","TTAGGAATATACAAAA",5,166.92,9.61,-1.22,0.05,2.82,1.08,0,">1 nonsynonymous","Y123C F156S",2
"lib2","SARS-CoV-2","TTAGGAATCGTAACCT",6,149.31,10.79,-0.05,0.05,2.86,1.1,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","TTAGGAATCTCCCCGA",5,111.19,10.91,0.07,0.05,2.99,1.03,0,">1 nonsynonymous","N1Y A18P",2
"lib2","SARS-CoV-2","TTAGGACAAACAACGT",1,1.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82D D97H",2
"lib2","SARS-CoV-2","TTAGGACAAGATGCTG",13,139.64,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","D90I Y165T",2
"lib2","SARS-CoV-2","TTAGGACACTGAATTG",3,42.39,10.7,-0.13,0.04,2.88,1.15,0,">1 nonsynonymous","R16V N120F V153R",3
"lib2","SARS-CoV-2","TTAGGACAGAATGGGC",2,52.81,8.63,-2.21,0.06,2.86,1.04,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","TTAGGACCAATCTTCA",5,41.79,9.68,-1.15,0.09,2.08,1.03,0,"1 nonsynonymous","V11E",1
"lib2","SARS-CoV-2","TTAGGACCGCAAGTTG",1,23.85,8.8,-2.04,0.16,2.05,1.14,0.01,">1 nonsynonymous","T100R N107H",2
"lib2","SARS-CoV-2","TTAGGACCTTGCGCTT",7,81.78,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23V Y50P K198L",3
"lib2","SARS-CoV-2","TTAGGAGAAGACAATT",3,88.44,8.8,-2.03,0.07,2.95,1.06,0,">1 nonsynonymous","I104T F156E",2
"lib2","SARS-CoV-2","TTAGGAGAGTACACTT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","K26* R27K A89S D97M Y121T R127S",6
"lib2","SARS-CoV-2","TTAGGAGGTAATGTAG",12,223.23,10.83,0,0.04,2.9,1.09,0,"1 nonsynonymous","K198L",1
"lib2","SARS-CoV-2","TTAGGAGGTAATTCAA",2,14.16,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","D90Y C102W S129Y Y143D P149V E154C T201M",7
"lib2","SARS-CoV-2","TTAGGAGTACCACACC",3,1.18,NA,NA,NA,NA,NA,NA,"stop","F12L Y39* F47H V103I D112W Q144A",6
"lib2","SARS-CoV-2","TTAGGATAAAACCTGG",2,15.89,8.46,-2.38,0.26,1.5,1.12,0.04,">1 nonsynonymous","A81Y Y123V",2
"lib2","SARS-CoV-2","TTAGGATAATAAGGGC",10,88.11,6,-4.84,1.22,1.5,1.14,0.01,"1 nonsynonymous","R124I",1
"lib2","SARS-CoV-2","TTAGGATAGTAGCTTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F D137M",2
"lib2","SARS-CoV-2","TTAGGATCGCCTGAAA",11,125.7,9.32,-1.52,0.06,2.13,1.08,0,">1 nonsynonymous","R27D N58D K87T L95C",4
"lib2","SARS-CoV-2","TTAGGATGTACAACCC",14,178.08,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V37Q K87T Y121F N151E Y159F Y175C",6
"lib2","SARS-CoV-2","TTAGGATGTCAAAGTA",3,19.91,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","Y93P N120H S129Y Y175S P191R",5
"lib2","SARS-CoV-2","TTAGGCAAGACTTAAT",11,119.37,10.6,-0.24,0.03,2.89,1.09,0,">1 nonsynonymous","G51R C61D S200H",3
"lib2","SARS-CoV-2","TTAGGCAATACCATAA",2,7.63,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","K128V P133H F185R",3
"lib2","SARS-CoV-2","TTAGGCACAACGCGAG",1,6.78,8.98,-1.86,0.16,3,1.03,0.01,">1 nonsynonymous","V52I Y119S L125M",3
"lib2","SARS-CoV-2","TTAGGCACGTGCTGCG",2,40.94,9.98,-0.86,0.06,2.56,1.07,0,">1 nonsynonymous","A14M Y35L D90R G116E K132M",5
"lib2","SARS-CoV-2","TTAGGCAGGCATACAT",14,45.14,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","A33L S45L G86R",3
"lib2","SARS-CoV-2","TTAGGCATAAATAACG",9,104.41,7.84,-3,0.16,1.56,1.15,0.01,"1 nonsynonymous","P177G",1
"lib2","SARS-CoV-2","TTAGGCATATATCTTA",6,0.42,NA,NA,NA,NA,NA,NA,"stop","Q144P F185*",2
"lib2","SARS-CoV-2","TTAGGCCTGTGACGGG",3,58.81,10.94,0.1,0.05,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAGGCCTTAACGGAC",7,106.1,10.8,-0.03,0.05,2.94,1.09,0,">1 nonsynonymous","S29Q T63K",2
"lib2","SARS-CoV-2","TTAGGCGAATGGCTGC",3,48.01,10.74,-0.09,0.08,2.97,1.05,0,"1 nonsynonymous","A89S",1
"lib2","SARS-CoV-2","TTAGGCTATTGTGCAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37Y T46S A81Y",3
"lib2","SARS-CoV-2","TTAGGCTCAAACTTAA",19,2.38,NA,NA,NA,NA,NA,NA,"stop","P7N N13L Y91P S113L R124S F134L S200*",7
"lib2","SARS-CoV-2","TTAGGCTCGACCACTA",5,36.83,10.69,-0.14,0.08,2.89,1.13,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","TTAGGCTCGTATTTTT",2,36.42,10.67,-0.17,0.05,2.95,1.04,0,">1 nonsynonymous","L122V T140Y",2
"lib2","SARS-CoV-2","TTAGGCTGATGCCTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56T N110S",2
"lib2","SARS-CoV-2","TTAGGCTTTACCAAAA",2,15.56,9.74,-1.09,0.11,2.77,1.19,0.01,">1 nonsynonymous","I142K L187Q",2
"lib2","SARS-CoV-2","TTAGGGAACAGAAATT",8,49.49,8.46,-2.38,0.27,1.5,1.05,0.03,"1 nonsynonymous","Y93I",1
"lib2","SARS-CoV-2","TTAGGGAATATAACGA",3,95.1,8.54,-2.3,0.12,2.46,1.06,0.01,">1 nonsynonymous","D90F F126Q",2
"lib2","SARS-CoV-2","TTAGGGACACCGAGGT",3,68.33,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F12R K26A K56D G83V P96S P177M",6
"lib2","SARS-CoV-2","TTAGGGAGCCGCTTCG",4,45.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L L38V K94S",3
"lib2","SARS-CoV-2","TTAGGGAGTGTTATCT",8,3.7,NA,NA,NA,NA,NA,NA,"stop","A42* K56W G83V Y143L",4
"lib2","SARS-CoV-2","TTAGGGCACTTTGAAA",5,25.69,9.08,-1.76,0.06,2.86,1.14,0,">1 nonsynonymous","G117T G152D",2
"lib2","SARS-CoV-2","TTAGGGCCAGCTATCC",6,83.49,7.61,-3.22,0.17,1.63,1.13,0.01,">1 nonsynonymous","L38R Y119K S129G",3
"lib2","SARS-CoV-2","TTAGGGGATATCAGAA",17,1.58,NA,NA,NA,NA,NA,NA,"stop","A22* G83R G172S",3
"lib2","SARS-CoV-2","TTAGGGTGTCATATAG",2,27.35,6,-4.84,1.86,1.5,1.15,0.01,">1 nonsynonymous","N92G K128C Q163R",3
"lib2","SARS-CoV-2","TTAGGGTTCGGGACCG",4,4.44,NA,NA,NA,NA,NA,NA,"stop","D34S N58T V77* G86F Y165G P169T",6
"lib2","SARS-CoV-2","TTAGGGTTCTTCACTA",7,47.31,8.75,-2.08,0.07,2.84,1.1,0,">1 nonsynonymous","D98Y N120T",2
"lib2","SARS-CoV-2","TTAGGGTTGCAGTATT",2,4.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R L5S K94E W106R",4
"lib2","SARS-CoV-2","TTAGGTAAACATACCG",12,129.56,10.78,-0.05,0.05,2.94,1.09,0,">1 nonsynonymous","I2C P54E T201V",3
"lib2","SARS-CoV-2","TTAGGTAATATTCATT",2,21.87,10.89,0.06,0.1,2.95,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TTAGGTAATGTACCCT",9,232.17,10.82,-0.02,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGGTAGATATGTAA",13,69.32,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","E154Y L162V R179M",3
"lib2","SARS-CoV-2","TTAGGTATAGACATTG",15,135.18,10.56,-0.28,0.03,2.89,1.11,0,">1 nonsynonymous","T3M N151T",2
"lib2","SARS-CoV-2","TTAGGTCACTAAAAGC",1,8.17,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","L57C A105D T148E",3
"lib2","SARS-CoV-2","TTAGGTCACTAAACTA",7,104.19,10.26,-0.57,0.04,2.87,1.03,0,"1 nonsynonymous","N107G",1
"lib2","SARS-CoV-2","TTAGGTCGCATCTTAC",6,23.25,6,-4.84,1.13,3,1.18,0.02,">1 nonsynonymous","T15V Y21T K56T C61W Y119M",5
"lib2","SARS-CoV-2","TTAGGTCTAACACATC",10,99.81,6.36,-4.48,0.28,1.5,1.11,0,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","TTAGGTGCCGCAAGCC",1,28.39,10.92,0.08,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGGTGCTCCAAAGC",7,32.3,7.59,-3.25,0.35,1.5,1.03,0.05,">1 nonsynonymous","F44R V103M I142M",3
"lib2","SARS-CoV-2","TTAGGTGTACATTGTA",1,67.09,10.79,-0.05,0.04,2.97,1.06,0,"1 nonsynonymous","K198L",1
"lib2","SARS-CoV-2","TTAGGTGTTTAAGGAA",3,23.87,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","F12G C61R F167G G174M A190G",5
"lib2","SARS-CoV-2","TTAGGTTAAACATGTA",1,31.06,7.94,-2.89,0.23,1.66,1.05,0.02,">1 nonsynonymous","G83I N109F T140E",3
"lib2","SARS-CoV-2","TTAGGTTGCTCCAAGG",6,3.69,NA,NA,NA,NA,NA,NA,"stop","P54L D98*",2
"lib2","SARS-CoV-2","TTAGGTTTAACCAACT",13,57.38,8.69,-2.14,0.22,1.5,1.03,0.03,">1 nonsynonymous","C6N S53R V182N",3
"lib2","SARS-CoV-2","TTAGGTTTTTAAAATC",13,140.12,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D98F G101C",2
"lib2","SARS-CoV-2","TTAGTAAAAGATGGAC",12,160.04,8.38,-2.45,0.12,2.63,1.06,0.01,"1 nonsynonymous","S113W",1
"lib2","SARS-CoV-2","TTAGTAAAGAACCCGG",1,32.45,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A81D D98H K128D C150S",4
"lib2","SARS-CoV-2","TTAGTAAAGATAACAT",1,0.88,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P82R",1
"lib2","SARS-CoV-2","TTAGTAAATCTGCTAA",4,115.28,10.15,-0.69,0.07,2.61,1.05,0,">1 nonsynonymous","K94S I104F",2
"lib2","SARS-CoV-2","TTAGTAAATGATCCCG",3,17.25,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","A42V G83I F99I",3
"lib2","SARS-CoV-2","TTAGTAAATTCAATAA",9,96.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3H N30W Y93T L131G",4
"lib2","SARS-CoV-2","TTAGTAAATTGTGCTA",2,8.8,NA,NA,NA,NA,NA,0.34,">1 nonsynonymous","C6L Y35D K56Q R127H L162R",5
"lib2","SARS-CoV-2","TTAGTAACCCAAAGGG",6,22.52,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","C6V R25I T63I Q79K",4
"lib2","SARS-CoV-2","TTAGTAACCCGACAGG",5,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12H D34T G117I",3
"lib2","SARS-CoV-2","TTAGTAACCGACGCTA",4,3.88,NA,NA,NA,NA,NA,NA,"stop","Q79* G152H R179K",3
"lib2","SARS-CoV-2","TTAGTAACCGGTTTGA",4,9.35,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2P K56S A89G C102R G174T",5
"lib2","SARS-CoV-2","TTAGTAAGAAACACGA",2,20.06,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","D137F P149N G152P Y165F",4
"lib2","SARS-CoV-2","TTAGTAAGACGTTACA",2,19.63,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","I2Y Y119N R136S C150N",4
"lib2","SARS-CoV-2","TTAGTAAGAGTCAAGA",3,37.08,9.14,-1.69,0.17,1.56,1.15,0.01,">1 nonsynonymous","L60T F99L",2
"lib2","SARS-CoV-2","TTAGTAAGTCTACATT",7,65.23,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N4A C49M F126D V173S",4
"lib2","SARS-CoV-2","TTAGTAATACAGCATG",1,1.85,NA,NA,NA,NA,NA,NA,"stop","P7* F62E V103L",3
"lib2","SARS-CoV-2","TTAGTACAACTTTTAA",11,2.23,NA,NA,NA,NA,NA,NA,"stop","Q144*",1
"lib2","SARS-CoV-2","TTAGTACAGTAATGCG",13,128.71,10.7,-0.14,0.04,2.96,1.06,0,">1 nonsynonymous","C61L L125I",2
"lib2","SARS-CoV-2","TTAGTACATAGAAGTT",3,62.38,8.06,-2.78,0.16,1.69,1.07,0.01,">1 nonsynonymous","V37K G152S N157C",3
"lib2","SARS-CoV-2","TTAGTACATGTGCGTA",4,216.37,9,-1.83,0.04,2.85,1.1,0,">1 nonsynonymous","Q168T G174L",2
"lib2","SARS-CoV-2","TTAGTACCACTACATA",1,17.64,6,-4.84,2,3,1.12,0,">1 nonsynonymous","L5K T55D T63I V182Y",4
"lib2","SARS-CoV-2","TTAGTACCCAAATCCC",5,72.77,7.27,-3.57,0.32,1.5,1.14,0.03,">1 nonsynonymous","T55C L131S",2
"lib2","SARS-CoV-2","TTAGTACCGTGAACAC",1,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84R N107G S113K N120P",4
"lib2","SARS-CoV-2","TTAGTACGGAAACCTA",3,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9V C31I K87G S139I",4
"lib2","SARS-CoV-2","TTAGTACTCAATAAAA",5,56.19,10.63,-0.2,0.05,2.88,1.11,0,">1 nonsynonymous","S41F N58P",2
"lib2","SARS-CoV-2","TTAGTAGAAACACGAA",1,12.52,9.36,-1.47,0.2,1.5,1.05,0.03,">1 nonsynonymous","I2Y S36R K94S I104M",4
"lib2","SARS-CoV-2","TTAGTAGCCCTTCAAA",8,30.35,8.14,-2.69,0.28,1.5,1.2,0.03,">1 nonsynonymous","T15I A89N",2
"lib2","SARS-CoV-2","TTAGTAGCGACTTTTA",3,2.57,NA,NA,NA,NA,NA,NA,"stop","Y35P D97*",2
"lib2","SARS-CoV-2","TTAGTAGCTCACCCAC",6,7.78,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","A14S I72R K87D V103P",4
"lib2","SARS-CoV-2","TTAGTAGTCACCGTTG",3,46.82,9.11,-1.72,0.16,1.67,1.09,0.01,">1 nonsynonymous","F8L P133W S139M",3
"lib2","SARS-CoV-2","TTAGTATAAAAGAACC",6,98.6,10.76,-0.08,0.08,2.87,1.07,0,"1 nonsynonymous","L122N",1
"lib2","SARS-CoV-2","TTAGTATAGACAAAAT",2,10.88,6,-4.84,2,1.5,1.05,0.02,">1 nonsynonymous","I88A D137S",2
"lib2","SARS-CoV-2","TTAGTATAGAGAGTAT",3,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12D Y165D",2
"lib2","SARS-CoV-2","TTAGTATCAGAATTGA",3,119.36,10.75,-0.08,0.04,3,1.03,0,">1 nonsynonymous","N110L I138Q",2
"lib2","SARS-CoV-2","TTAGTATTATCGAACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N110P",1
"lib2","SARS-CoV-2","TTAGTATTCAAACTGC",5,60.7,9.49,-1.35,0.08,2.2,1,0,">1 nonsynonymous","C6R E141K K199Q",3
"lib2","SARS-CoV-2","TTAGTATTGAAATGTC",18,160.41,9.58,-1.26,0.05,1.87,1.08,0,">1 nonsynonymous","V52W N58M Q84N",3
"lib2","SARS-CoV-2","TTAGTATTTAACGAGC",6,49.26,7.45,-3.39,0.55,1.5,1.08,0.07,">1 nonsynonymous","G51V A89F N120F",3
"lib2","SARS-CoV-2","TTAGTCAAAATCCAGA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106I Q168K F185W A190T",4
"lib2","SARS-CoV-2","TTAGTCAAATAGTATA",1,2.31,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L L95P D98A D112F",4
"lib2","SARS-CoV-2","TTAGTCAAATCTTACG",3,124.47,10.5,-0.33,0.04,2.89,1.05,0,"1 nonsynonymous","V37G",1
"lib2","SARS-CoV-2","TTAGTCAAGAGGTATT",4,43.32,9.2,-1.64,0.14,1.5,1.06,0.01,">1 nonsynonymous","F17Q N64L",2
"lib2","SARS-CoV-2","TTAGTCAGACCGAGGA",2,20.65,8.22,-2.62,0.24,1.54,1.08,0.02,">1 nonsynonymous","A67C N107T N120K",3
"lib2","SARS-CoV-2","TTAGTCAGGCCCACAT",5,71.18,9.66,-1.18,0.04,2.83,1.06,0,">1 nonsynonymous","P96A T170W",2
"lib2","SARS-CoV-2","TTAGTCATAGGGAAAA",5,66.06,9.57,-1.26,0.07,2.08,1.06,0,">1 nonsynonymous","Y39P F62T D90Y",3
"lib2","SARS-CoV-2","TTAGTCATATGACAAG",1,13.32,10.76,-0.08,0.05,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGTCATTCATACGT",3,18.66,8.18,-2.65,0.29,1.5,1.04,0.04,">1 nonsynonymous","D34S G86S T100I",3
"lib2","SARS-CoV-2","TTAGTCCAAAATATTT",3,7,10.11,-0.72,0.09,2.81,1.12,0,">1 nonsynonymous","A14R V182I",2
"lib2","SARS-CoV-2","TTAGTCCAAACATCTT",3,114.43,10.71,-0.12,0.05,2.92,1.09,0,">1 nonsynonymous","L95I G196C",2
"lib2","SARS-CoV-2","TTAGTCCAACAATCAA",4,41.16,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","E10S K87R Y93E",3
"lib2","SARS-CoV-2","TTAGTCCAACTCTTAT",7,163.23,10.76,-0.07,0.04,2.96,1.06,0,"1 nonsynonymous","Y121F",1
"lib2","SARS-CoV-2","TTAGTCCAAGCATCAC",11,0.8,NA,NA,NA,NA,NA,NA,"stop","C31K K56* F70L S129V",4
"lib2","SARS-CoV-2","TTAGTCCAATCTACAG",1,12.53,10.67,-0.17,0.15,2.84,1.14,0.01,"1 nonsynonymous","N4W",1
"lib2","SARS-CoV-2","TTAGTCCAGACATTAG",5,49.8,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","W23T E141C",2
"lib2","SARS-CoV-2","TTAGTCCATATTTTAA",6,6.72,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","F12N L95K N171R",3
"lib2","SARS-CoV-2","TTAGTCCGATCCAACC",6,15.6,NA,NA,NA,NA,NA,NA,"stop","E10Y A14P F47L N64S L95* N107E",6
"lib2","SARS-CoV-2","TTAGTCCTATTTTACA",1,0.65,NA,NA,NA,NA,NA,NA,"stop","K48H F62A I80W N107S E186*",5
"lib2","SARS-CoV-2","TTAGTCCTTAATTTAC",1,1.42,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","TTAGTCGACGGTATAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55L Y121A",2
"lib2","SARS-CoV-2","TTAGTCGACTAAAGTA",11,1.61,NA,NA,NA,NA,NA,NA,"stop","Q144N V173*",2
"lib2","SARS-CoV-2","TTAGTCGCAACATAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","W23* E141L L183*",3
"lib2","SARS-CoV-2","TTAGTCGCGCAAAAAC",9,127.91,10.65,-0.18,0.03,2.95,1.06,0,"1 nonsynonymous","G152H",1
"lib2","SARS-CoV-2","TTAGTCGGATATAATG",1,50.73,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","Y66R N92K",2
"lib2","SARS-CoV-2","TTAGTCTATTGTATAC",9,96.54,10.27,-0.56,0.04,2.91,1.06,0,">1 nonsynonymous","Y35G G83K",2
"lib2","SARS-CoV-2","TTAGTCTCATCCTGGG",2,58.21,10.51,-0.32,0.14,2.47,1.13,0.01,"1 nonsynonymous","K87M",1
"lib2","SARS-CoV-2","TTAGTCTCTTACAGGA",2,10.47,10.39,-0.45,0.23,2.66,1,0.02,">1 nonsynonymous","N4P F17N S43L Y91T R127C C150L",6
"lib2","SARS-CoV-2","TTAGTCTGTTTAAAGC",6,0.33,NA,NA,NA,NA,NA,NA,"stop","F99Y S113* E135L C158G",4
"lib2","SARS-CoV-2","TTAGTGAAAAGGCACA",5,54.43,10.76,-0.07,0.05,2.93,1.08,0,"1 nonsynonymous","T15K",1
"lib2","SARS-CoV-2","TTAGTGAATAAGTGCA",4,24.52,7.19,-3.65,0.36,1.5,1.12,0.06,">1 nonsynonymous","I2W L95S A105K T201D",4
"lib2","SARS-CoV-2","TTAGTGAATGTATTAA",2,0.76,NA,NA,NA,NA,NA,NA,"stop","Y35* F62T L122M F156T",4
"lib2","SARS-CoV-2","TTAGTGACTAAGATGT",1,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S F47A F99S C158A E186F",5
"lib2","SARS-CoV-2","TTAGTGACTGTAGTGC",1,4.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K P169M S200G",3
"lib2","SARS-CoV-2","TTAGTGAGTGATACGC",3,16.25,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","K56R D75A A81P T100S",4
"lib2","SARS-CoV-2","TTAGTGATCATTCCTA",2,27.17,8.19,-2.64,0.14,2.83,1.07,0.01,"1 nonsynonymous","N157Y",1
"lib2","SARS-CoV-2","TTAGTGATTGCTCTCA",1,151.79,10.81,-0.03,0.05,2.92,1.08,0,"1 nonsynonymous","K198T",1
"lib2","SARS-CoV-2","TTAGTGCATAAACGGC",12,175.33,6.79,-4.04,0.22,1.5,1.1,0.01,">1 nonsynonymous","G9L S43T N107L N130Y",4
"lib2","SARS-CoV-2","TTAGTGCCAAGTTACT",4,44.46,9.37,-1.47,0.13,2.56,1.04,0.01,">1 nonsynonymous","L38H Y91F L125A",3
"lib2","SARS-CoV-2","TTAGTGCCATGGAAAC",2,51.53,8.35,-2.48,0.07,2.89,1.06,0,">1 nonsynonymous","L5G Y121V F156T",3
"lib2","SARS-CoV-2","TTAGTGCCTGTTACGG",2,14.06,9.81,-1.02,0.28,1.75,1.2,0.03,">1 nonsynonymous","W106C V115R",2
"lib2","SARS-CoV-2","TTAGTGCCTTTCCATC",2,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68L I88V Y121L L131N Y178H",5
"lib2","SARS-CoV-2","TTAGTGCTGCCAAAAG",4,2.99,NA,NA,NA,NA,NA,NA,"stop","N40* T46S Y91* N107D Y143I Q168* T201D",7
"lib2","SARS-CoV-2","TTAGTGGATTCATGGA",1,7.61,8.48,-2.36,0.22,1.68,1.07,0.03,">1 nonsynonymous","G9K N107V F160M",3
"lib2","SARS-CoV-2","TTAGTGGGAGTAACCA",1,5.54,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","S36P Y50S Q84C V173L",4
"lib2","SARS-CoV-2","TTAGTGTTACGATGAA",1,15.01,10.51,-0.33,0.11,2.97,1,0.01,">1 nonsynonymous","D90S N151Y",2
"lib2","SARS-CoV-2","TTAGTTAAAAAAGACT",6,75.15,9.48,-1.35,0.11,2.23,1,0,">1 nonsynonymous","Y39C N58I N120F A190T",4
"lib2","SARS-CoV-2","TTAGTTAAAAGGAACT",2,41.58,10.37,-0.47,0.05,2.93,1.03,0,">1 nonsynonymous","F8L D34S N151Q P197R",4
"lib2","SARS-CoV-2","TTAGTTAAAGACAACG",3,2.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49M F185K",2
"lib2","SARS-CoV-2","TTAGTTAACCTAACAC",7,214.16,9.99,-0.85,0.06,2.37,1.04,0,">1 nonsynonymous","T63A F99Y N110A T140M",4
"lib2","SARS-CoV-2","TTAGTTAAGCAAGTCC",1,49.15,10.83,-0.01,0.08,2.93,1.08,0,">1 nonsynonymous","I2K K114T",2
"lib2","SARS-CoV-2","TTAGTTAATACAAATA",9,37.87,6.14,-4.7,0.65,1.5,1.12,0.01,">1 nonsynonymous","S69K N107M",2
"lib2","SARS-CoV-2","TTAGTTACACGTCGCA",18,89.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G101Q G146E",2
"lib2","SARS-CoV-2","TTAGTTACCGCCACAT",18,219.97,10.81,-0.03,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGTTACTAAAAAGT",1,14.64,6,-4.84,2,3,1.14,0.01,">1 nonsynonymous","P7H S45L G83Q Y91R N120I E141L",6
"lib2","SARS-CoV-2","TTAGTTACTTCTCCTC",7,34.33,7.79,-3.05,0.28,1.5,1.09,0.03,">1 nonsynonymous","S41I T46L L60T R78V Q144L",5
"lib2","SARS-CoV-2","TTAGTTAGAAGGATCA",5,137.84,10.67,-0.17,0.06,2.87,1.03,0,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","TTAGTTATACTCATCA",15,112.93,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D98R S108K T201M",3
"lib2","SARS-CoV-2","TTAGTTATGAGATTTC",6,51.65,6,-4.84,1.85,3,1.19,0,">1 nonsynonymous","L60Q Y91V T100Y Y119S Y143Q T201W",6
"lib2","SARS-CoV-2","TTAGTTGAACAAACTA",6,162.71,10.75,-0.08,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTAGTTGAAGCGTTAA",4,0,NA,NA,NA,NA,NA,NA,"stop","Y93* F185D",2
"lib2","SARS-CoV-2","TTAGTTGCGAACAAGT",1,38.08,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R27W V37M C61D W106V D112F",5
"lib2","SARS-CoV-2","TTAGTTGTAGTAGCAT",4,35.9,9.54,-1.3,0.07,2.95,1.04,0,">1 nonsynonymous","S41N K87F Q176R",3
"lib2","SARS-CoV-2","TTAGTTGTCCTTAAAC",2,54.35,10.52,-0.31,0.06,2.77,1.08,0,">1 nonsynonymous","V37T A105M N171M",3
"lib2","SARS-CoV-2","TTAGTTTAAATCGAGT",16,143.47,6.14,-4.7,0.95,1.5,1.22,0.03,">1 nonsynonymous","F8L G152Q V180F",3
"lib2","SARS-CoV-2","TTAGTTTATAATAGAG",7,55.2,6,-4.84,1.08,1.5,1.1,0.02,">1 nonsynonymous","G74M Y123E I138G",3
"lib2","SARS-CoV-2","TTAGTTTCTATGCTAA",14,189.08,6.37,-4.47,0.34,1.5,1.16,0.01,">1 nonsynonymous","Y21Q N157H K199M",3
"lib2","SARS-CoV-2","TTAGTTTGGGCAAATT",4,137.07,10.32,-0.51,0.03,2.82,1.1,0,">1 nonsynonymous","I88T P197L",2
"lib2","SARS-CoV-2","TTAGTTTTCGCATAGA",3,52.6,6,-4.84,1.61,1.5,1.12,0.01,">1 nonsynonymous","P82M F126K",2
"lib2","SARS-CoV-2","TTAGTTTTGTTATTGT",7,41.09,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","G9Y N24Q V37L G51F T100Y I104N G117L N157C",8
"lib2","SARS-CoV-2","TTAGTTTTTATGGACC",10,12.07,9.43,-1.41,0.26,1.91,1.12,0.01,">1 nonsynonymous","A42I F99V",2
"lib2","SARS-CoV-2","TTATAAAAACGAGTAT",4,27,6.11,-4.72,0.63,1.5,1.07,0.01,">1 nonsynonymous","Y91L R124G",2
"lib2","SARS-CoV-2","TTATAAAAATAAGGTG",1,0,NA,NA,NA,NA,NA,NA,"stop","A89Q F99*",2
"lib2","SARS-CoV-2","TTATAAAATAAACGCC",6,20.53,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T3K L95H G174L",3
"lib2","SARS-CoV-2","TTATAAAATAAGCATA",3,24.94,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","R25A Y35W G152F F167K",4
"lib2","SARS-CoV-2","TTATAAAATACGCAAT",15,140.9,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","R127P N130I F156N S164N K199M",5
"lib2","SARS-CoV-2","TTATAAACAACACCAT",9,150.92,8.66,-2.18,0.06,2.24,1.1,0,">1 nonsynonymous","F44N P161A",2
"lib2","SARS-CoV-2","TTATAAACAACAGACG",3,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39G N171Q",2
"lib2","SARS-CoV-2","TTATAAACAAGTGCCT",6,84.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C49H L57F G166V R179T",4
"lib2","SARS-CoV-2","TTATAAACACCTAAAA",1,40.98,8.12,-2.71,0.18,1.86,1.12,0.01,">1 nonsynonymous","N30R D112L",2
"lib2","SARS-CoV-2","TTATAAACCTGTTAAC",3,8.74,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96M I142Q V173N",3
"lib2","SARS-CoV-2","TTATAAACGCAACAGA",2,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10T K94V",2
"lib2","SARS-CoV-2","TTATAAACTAGGCACG",4,65.76,8.71,-2.12,0.11,1.55,1.15,0.01,">1 nonsynonymous","T55H K94I T201R",3
"lib2","SARS-CoV-2","TTATAAACTTACGTTA",6,55.71,8.16,-2.68,0.22,1.55,1.21,0.02,"1 nonsynonymous","G86K",1
"lib2","SARS-CoV-2","TTATAAAGTAAAACAA",7,114.78,10.73,-0.11,0.03,2.97,1.04,0,"1 nonsynonymous","S147I",1
"lib2","SARS-CoV-2","TTATAAAGTAAATGCC",3,45.39,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L95K N107P",2
"lib2","SARS-CoV-2","TTATAAAGTAGAGATA",3,141.91,10.69,-0.15,0.03,2.93,1.08,0,"1 nonsynonymous","V32A",1
"lib2","SARS-CoV-2","TTATAAAGTCACGCGA",2,18.54,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","S45F N58Y G117L P161N",4
"lib2","SARS-CoV-2","TTATAAAGTGCCGCAA",1,48.12,9.89,-0.95,0.06,2.58,1.09,0,">1 nonsynonymous","Q84Y N151T F160Y K198P",4
"lib2","SARS-CoV-2","TTATAAATAACCGGAG",3,18.3,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","Y35P T46R D98S N120V Y159S G166C",6
"lib2","SARS-CoV-2","TTATAAATAATTATAG",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53P I104R R136P Y143L",4
"lib2","SARS-CoV-2","TTATAAATATGTGACC",5,54.03,10.66,-0.17,0.06,2.87,1.13,0,">1 nonsynonymous","T3R K56Q S139N",3
"lib2","SARS-CoV-2","TTATAAATTTAACGAG",4,58.02,10.88,0.04,0.05,2.99,1.01,0,">1 nonsynonymous","D98K N110K",2
"lib2","SARS-CoV-2","TTATAAATTTTTAACG",15,222.5,7.92,-2.91,0.08,2.37,1.12,0,">1 nonsynonymous","T55K Y175K",2
"lib2","SARS-CoV-2","TTATAACAACACTATA",1,0.12,NA,NA,NA,NA,NA,NA,"stop","T15N P82K H189Y T201*",4
"lib2","SARS-CoV-2","TTATAACACACCAGAC",4,79.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I28M V52L F160T F167T P177Y",5
"lib2","SARS-CoV-2","TTATAACACATAAACG",10,21.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85R A105R",2
"lib2","SARS-CoV-2","TTATAACACCGCACAA",7,89.57,9.5,-1.34,0.09,1.88,1.07,0,">1 nonsynonymous","V11Q F44L",2
"lib2","SARS-CoV-2","TTATAACACTAATAAT",9,53.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S29W F44N V103F G155P",4
"lib2","SARS-CoV-2","TTATAACAGATCCCTT",5,0.14,NA,NA,NA,NA,NA,NA,"stop","N64A E76* P82R T140F P149H",5
"lib2","SARS-CoV-2","TTATAACAGCCTGATG",2,64.02,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","Y39S Y91I P96R I138R V180I",5
"lib2","SARS-CoV-2","TTATAACATAAAAGAC",16,73.86,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N120T G155D F185A",3
"lib2","SARS-CoV-2","TTATAACCACGTGGAA",2,12.79,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","R25F Q84K N92Y G152M Y165V",5
"lib2","SARS-CoV-2","TTATAACCCCTTGGTG",2,54.25,8.39,-2.45,0.13,2.61,1.05,0.01,">1 nonsynonymous","D98L A145D",2
"lib2","SARS-CoV-2","TTATAACCTAACCAAC",3,37.34,6,-4.84,2,3,1.19,0,">1 nonsynonymous","R25P A42F K48R A89G P96R",5
"lib2","SARS-CoV-2","TTATAACCTCCCCGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F8* A14E N130P",3
"lib2","SARS-CoV-2","TTATAACGATTAACGC",1,17.89,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","T3H R127L G166H",3
"lib2","SARS-CoV-2","TTATAACGCATGTTAG",10,2.41,NA,NA,NA,NA,NA,NA,"stop","N1L P7T A22* P149S E154N Y165W",6
"lib2","SARS-CoV-2","TTATAACTAGAAATTT",3,10.5,8.54,-2.29,0.17,2.15,1.05,0.01,"1 nonsynonymous","N107I",1
"lib2","SARS-CoV-2","TTATAACTCACCTTAA",1,26.54,9.83,-1.01,0.12,2.61,1.01,0.01,">1 nonsynonymous","C31M V65M",2
"lib2","SARS-CoV-2","TTATAACTCGCGTACT",5,12.61,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G101V E141L F167S",3
"lib2","SARS-CoV-2","TTATAACTCTATATTT",1,71.92,10.79,-0.04,0.04,2.9,1.12,0,"1 nonsynonymous","S43H",1
"lib2","SARS-CoV-2","TTATAACTTATGCAAG",7,37.47,10.73,-0.11,0.04,2.97,1.04,0,"1 nonsynonymous","P7H",1
"lib2","SARS-CoV-2","TTATAAGAAAGGTTAC",3,2.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4P A105P L122D Y165D",4
"lib2","SARS-CoV-2","TTATAAGAAGAAGAAC",10,114.43,10.63,-0.21,0.03,2.95,1.07,0,">1 nonsynonymous","F44I T201M",2
"lib2","SARS-CoV-2","TTATAAGACTTTTCAA",1,14.66,8.52,-2.32,0.33,1.7,1.12,0.05,">1 nonsynonymous","D59R Y66V N118R K128M",4
"lib2","SARS-CoV-2","TTATAAGAGATATTAG",7,101.72,10.86,0.02,0.06,2.89,1.13,0,"1 nonsynonymous","N120Q",1
"lib2","SARS-CoV-2","TTATAAGAGGTTCGTT",1,2.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44L G101C I138Q T201D",4
"lib2","SARS-CoV-2","TTATAAGAGTAATATG",3,112.43,10.84,0.01,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATAAGCACGACCCC",4,21.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42V V153M P177Q",3
"lib2","SARS-CoV-2","TTATAAGCATAAGTTT",4,92.65,10.31,-0.52,0.04,2.84,1.06,0,">1 nonsynonymous","R127K T148S K199M",3
"lib2","SARS-CoV-2","TTATAAGCATATAATA",3,57.64,10.39,-0.45,0.09,2.77,1.04,0,">1 nonsynonymous","P133T V173I",2
"lib2","SARS-CoV-2","TTATAAGCTTACACCT",7,183.93,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L60F G83S D90E I138C T170K P177T",6
"lib2","SARS-CoV-2","TTATAAGGATTTAATA",3,64.62,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","E10L R27G E141T N157V",4
"lib2","SARS-CoV-2","TTATAAGTCAACTCTA",3,11.33,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","I2H G101I V182D A192K",4
"lib2","SARS-CoV-2","TTATAATAAATTAGGG",6,56.74,10.13,-0.7,0.07,2.87,1.06,0,">1 nonsynonymous","C6S T55W T201M",3
"lib2","SARS-CoV-2","TTATAATAACGCCTAC",1,22.21,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","W23E P169L",2
"lib2","SARS-CoV-2","TTATAATAATAACCGA",1,14.07,9.85,-0.98,0.13,2.28,1.01,0.01,">1 nonsynonymous","A42I L57V D90A",3
"lib2","SARS-CoV-2","TTATAATAGCACAACA",5,48.81,9.79,-1.05,0.05,2.91,1.01,0,"1 nonsynonymous","I142S",1
"lib2","SARS-CoV-2","TTATAATAGGACTAGG",1,6.63,6,-4.84,2,1.5,1.26,0.06,">1 nonsynonymous","I28W T85R P133G Y175V V182G",5
"lib2","SARS-CoV-2","TTATAATAGTCGGCGG",1,29.13,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N109S G146V",2
"lib2","SARS-CoV-2","TTATAATAGTTATTTA",10,104.75,10.71,-0.13,0.05,2.94,1.07,0,">1 nonsynonymous","N1K D98S",2
"lib2","SARS-CoV-2","TTATAATATGTTGGGA",6,46.09,6,-4.84,2,1.5,1.11,0.01,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","TTATAATCCTAGGGCT",1,17.4,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","K26G C158W",2
"lib2","SARS-CoV-2","TTATAATCGATCTGGA",8,45.33,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G9W V52N Q79R K94I",4
"lib2","SARS-CoV-2","TTATAATCGATTGAAA",4,2.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42Y T85S F167E Y178D",4
"lib2","SARS-CoV-2","TTATAATGAAAAATCA",2,65.24,10.72,-0.11,0.06,2.89,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATAATGAGTAACTG",8,139.57,8.53,-2.31,0.09,2.92,1.03,0,">1 nonsynonymous","K48T N157M",2
"lib2","SARS-CoV-2","TTATAATGCTCTTATA",3,30.18,7.07,-3.77,0.17,1.71,1.1,0.01,">1 nonsynonymous","C61S Y91G K128F",3
"lib2","SARS-CoV-2","TTATAATTAACAAACA",5,72.4,10.74,-0.1,0.02,2.99,1.04,0,"1 nonsynonymous","S53H",1
"lib2","SARS-CoV-2","TTATAATTACCATGTA",1,7.17,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","R16V G101V Y175G",3
"lib2","SARS-CoV-2","TTATAATTACTAAATT",12,260.84,8.79,-2.05,0.06,2.78,1.1,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","TTATAATTATTACATC",7,154.81,7.22,-3.62,0.08,1.97,1.13,0,">1 nonsynonymous","S113Y N118H",2
"lib2","SARS-CoV-2","TTATAATTTATACAAA",8,177.32,10.83,0,0.05,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TTATAATTTATACGCC",3,57.34,9.93,-0.9,0.09,2.44,1.05,0,">1 nonsynonymous","N4C C61G A105T",3
"lib2","SARS-CoV-2","TTATAATTTTGAACGC",10,106.74,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","K87T G172M P197V",3
"lib2","SARS-CoV-2","TTATACAAAACTAGGA",1,4.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12L A18K E141H",3
"lib2","SARS-CoV-2","TTATACAAACATCCTT",2,109.14,7.96,-2.87,0.11,2.57,1.11,0,">1 nonsynonymous","T55L K87L Y119F K132N T170N",5
"lib2","SARS-CoV-2","TTATACAAACCAAGTG",1,5.28,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6V K26L V103G N130Q",4
"lib2","SARS-CoV-2","TTATACAAACGTTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","N107*",1
"lib2","SARS-CoV-2","TTATACAAGCTCGCGA",9,1.69,NA,NA,NA,NA,NA,NA,"stop","Y66* I88F S113Y N151T",4
"lib2","SARS-CoV-2","TTATACAATAGTGTTA",1,6.23,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","Y93V K128L C158M",3
"lib2","SARS-CoV-2","TTATACAATTAGCCCT",2,33.83,8.89,-1.94,0.07,2.93,1.05,0,">1 nonsynonymous","I104V P149T G166R",3
"lib2","SARS-CoV-2","TTATACACACACACAC",8,26.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49A N107S L162C V180D",4
"lib2","SARS-CoV-2","TTATACACGCTAAAAT",1,69.85,9.25,-1.58,0.1,1.69,1.07,0,">1 nonsynonymous","G9L A18Q R127S K198S",4
"lib2","SARS-CoV-2","TTATACAGAAAATAAA",13,79.2,7.53,-3.31,0.35,1.5,1.1,0.03,">1 nonsynonymous","I88C K128L",2
"lib2","SARS-CoV-2","TTATACAGAATTTAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A67V Y91M F167*",3
"lib2","SARS-CoV-2","TTATACAGCAATGAAC",9,31.71,6.26,-4.58,0.48,3,1.19,0.01,">1 nonsynonymous","V32G S41A I104S D112L",4
"lib2","SARS-CoV-2","TTATACAGTAAGGATT",1,21.02,6.34,-4.5,0.84,1.5,1.11,0.05,">1 nonsynonymous","F17G L57W Q176K",3
"lib2","SARS-CoV-2","TTATACAGTTACGCTT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","C6* T15Y D34P S36P L60R A89M T100A G146H",8
"lib2","SARS-CoV-2","TTATACATAAAAATAT",1,0.76,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","TTATACATCACACGGT",2,22,9.57,-1.27,0.08,2.98,1.03,0,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","TTATACATCGATGATT",4,23.31,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","T3L F17R D34C E154D",4
"lib2","SARS-CoV-2","TTATACATGTCCCAAG",7,2,NA,NA,NA,NA,NA,NA,"stop","Y39* S45R",2
"lib2","SARS-CoV-2","TTATACATTTATCCTG",1,28.05,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T100N Y119Q F126V E135L",4
"lib2","SARS-CoV-2","TTATACCAGGTATATT",1,12.57,9.07,-1.77,0.15,1.72,1.14,0.01,"1 nonsynonymous","Y50Q",1
"lib2","SARS-CoV-2","TTATACCCAAAAAGTT",9,44.58,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","E76I Q144L",2
"lib2","SARS-CoV-2","TTATACCCAAATACAC",2,6.62,8.85,-1.99,0.27,1.75,1.09,0.03,">1 nonsynonymous","D98H N107V",2
"lib2","SARS-CoV-2","TTATACCGCGCTGCGT",7,0.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11K Y35P G146W",3
"lib2","SARS-CoV-2","TTATACCTAACGTAAA",6,100.23,10.12,-0.72,0.08,2.77,1.01,0,"1 nonsynonymous","G83I",1
"lib2","SARS-CoV-2","TTATACCTACTACCAA",3,41.27,6,-4.84,1.54,3,1.18,0.01,">1 nonsynonymous","S36L C61M I88G D137F Y143A V180S",6
"lib2","SARS-CoV-2","TTATACCTGATATCAT",8,113.31,10.37,-0.46,0.06,2.88,1.11,0,">1 nonsynonymous","G83N Y143H",2
"lib2","SARS-CoV-2","TTATACGAGCCATCCA",7,100.53,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F8M V32R D90T S139P",4
"lib2","SARS-CoV-2","TTATACGAGTAACACT",6,51.13,6.29,-4.55,0.41,1.5,1.17,0.01,">1 nonsynonymous","A18L A33L N107K S129C",4
"lib2","SARS-CoV-2","TTATACGCCTGACTAA",1,4.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R N120Y Q168R L183S",4
"lib2","SARS-CoV-2","TTATACGCCTGGAGAA",2,1.2,NA,NA,NA,NA,NA,NA,"stop","R25I C61* N120R E141H C158L",5
"lib2","SARS-CoV-2","TTATACGCTAGTCGTA",6,69.93,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N13I F44K N58T D68M F70Y",5
"lib2","SARS-CoV-2","TTATACGCTCGGCTTA",2,8,8.76,-2.08,0.13,2.56,1.01,0.01,"1 nonsynonymous","D112V",1
"lib2","SARS-CoV-2","TTATACGGACTAGTTA",5,81.6,10.8,-0.04,0.06,2.95,1.07,0,"1 nonsynonymous","D97K",1
"lib2","SARS-CoV-2","TTATACGGATAATATT",7,18.28,6.33,-4.51,0.78,1.5,1.17,0.04,">1 nonsynonymous","D34N G172A V181A",3
"lib2","SARS-CoV-2","TTATACGGCGGGTGGT",6,26.8,8.17,-2.67,0.22,2.2,1.19,0.02,">1 nonsynonymous","E10C N64V Y143M P149K",4
"lib2","SARS-CoV-2","TTATACGTACCAACTT",1,32.39,8.33,-2.51,0.12,2.47,1.04,0.01,">1 nonsynonymous","Y35E K114P",2
"lib2","SARS-CoV-2","TTATACGTAGACGAAA",19,130.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I2L N64W A89D K128N",4
"lib2","SARS-CoV-2","TTATACGTCGGTAACC",2,70.68,10.77,-0.06,0.05,2.93,1.07,0,"1 nonsynonymous","N110V",1
"lib2","SARS-CoV-2","TTATACGTCTGGCACG",2,18.21,8.53,-2.3,0.2,2.8,1.12,0.02,"1 nonsynonymous","Y175S",1
"lib2","SARS-CoV-2","TTATACTAATACAGAC",9,154.07,7.73,-3.1,0.11,1.87,1.12,0,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","TTATACTATAAAGACA",1,127.15,10.24,-0.6,0.02,2.9,1.08,0,">1 nonsynonymous","V32D F134L",2
"lib2","SARS-CoV-2","TTATACTATCATCTGG",5,16.19,10.65,-0.18,0.09,2.98,1,0,">1 nonsynonymous","P54K K128G E141L",3
"lib2","SARS-CoV-2","TTATACTCCAGTCTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9K K48G D90C L122K",4
"lib2","SARS-CoV-2","TTATACTCCTATAGAC",2,8.98,6.22,-4.61,0.31,3,1.1,0,">1 nonsynonymous","V103M L183F",2
"lib2","SARS-CoV-2","TTATACTGCAAGATGC",4,81.86,10.81,-0.03,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATACTTCTGAACTA",7,135.68,9.87,-0.97,0.06,2.45,1.01,0,">1 nonsynonymous","N109V G155S L162M",3
"lib2","SARS-CoV-2","TTATAGAAAAAATCAC",1,68.88,10.51,-0.33,0.04,2.97,1,0,">1 nonsynonymous","K132V P191H G196W",3
"lib2","SARS-CoV-2","TTATAGAAAAGTATCA",6,146.25,10.68,-0.15,0.02,2.95,1.06,0,"1 nonsynonymous","S41I",1
"lib2","SARS-CoV-2","TTATAGAAAATGAAGG",1,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94P V182Q",2
"lib2","SARS-CoV-2","TTATAGAACACAAAAA",18,199.92,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P7V R16H L38M D59C Y159S",5
"lib2","SARS-CoV-2","TTATAGAACAGGTTCG",16,159.09,10.12,-0.72,0.05,2.67,1.02,0,">1 nonsynonymous","T55K D90I",2
"lib2","SARS-CoV-2","TTATAGAACCGACGGC",1,0.62,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92I",1
"lib2","SARS-CoV-2","TTATAGAATAAATTAC",3,37.74,6.02,-4.81,1.09,3,1.12,0.02,">1 nonsynonymous","N30M S43G D98A E141C G155T",5
"lib2","SARS-CoV-2","TTATAGAATACTGATG",1,11,7.79,-3.04,0.54,1.85,1.25,0.06,">1 nonsynonymous","D112V Y121L",2
"lib2","SARS-CoV-2","TTATAGAATGAACGAG",1,13.79,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","S19I A89W D97Y",3
"lib2","SARS-CoV-2","TTATAGACAAGACTAT",8,82.64,9.51,-1.33,0.09,1.89,1.1,0,">1 nonsynonymous","C61K L95C Q144N",3
"lib2","SARS-CoV-2","TTATAGACAAGGCCCC",2,28.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28W F44N V103Y",3
"lib2","SARS-CoV-2","TTATAGACACGACGGC",1,7.84,6,-4.84,2,1.5,1.02,0,">1 nonsynonymous","C6S V37L N64Q P82Q I88W",5
"lib2","SARS-CoV-2","TTATAGACGTCTACAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G172A",1
"lib2","SARS-CoV-2","TTATAGAGGTAAATCA",7,81.58,9.99,-0.85,0.06,2.38,1.09,0,">1 nonsynonymous","N64S I80M",2
"lib2","SARS-CoV-2","TTATAGATCACAACTT",2,111.5,8.84,-1.99,0.07,2.82,1.09,0,">1 nonsynonymous","Y119S E141K P191L",3
"lib2","SARS-CoV-2","TTATAGATGTCGCTAC",7,78.87,10.76,-0.07,0.05,2.91,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATAGATGTCTTAAG",3,80.83,10.1,-0.74,0.06,2.83,1.01,0,"1 nonsynonymous","C31Y",1
"lib2","SARS-CoV-2","TTATAGATTAATCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* F99H P197S",3
"lib2","SARS-CoV-2","TTATAGATTACCTAAT",1,24.47,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","I72H D97W G117A",3
"lib2","SARS-CoV-2","TTATAGATTCAACATA",3,33.3,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C31H N40G K48M K87W E154F",5
"lib2","SARS-CoV-2","TTATAGCATACAAACC",8,156.5,9.34,-1.5,0.07,2.19,1.07,0,">1 nonsynonymous","N30Q T85S D90A V115G",4
"lib2","SARS-CoV-2","TTATAGCATACGTACA",2,59.13,6.96,-3.88,0.39,1.5,1.13,0.03,">1 nonsynonymous","D59T G86A F134L",3
"lib2","SARS-CoV-2","TTATAGCCCTCAGCAA",11,118.05,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","T140P C158F",2
"lib2","SARS-CoV-2","TTATAGCGAGACACAA",4,10.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G51K Q84N L95W K128T",4
"lib2","SARS-CoV-2","TTATAGCGCATTGGCG",4,0,NA,NA,NA,NA,NA,NA,"stop","T3M S45W F99S R136T S147*",5
"lib2","SARS-CoV-2","TTATAGCGGTACATCG",8,232.03,8.08,-2.76,0.12,2.4,1.09,0,">1 nonsynonymous","C6G Y175N",2
"lib2","SARS-CoV-2","TTATAGCTCACTCCGA",5,14.92,10.74,-0.09,0.04,2.98,1,0,">1 nonsynonymous","S184K T201L",2
"lib2","SARS-CoV-2","TTATAGGAAATACCGA",4,27.12,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","A42T S69L N107H",3
"lib2","SARS-CoV-2","TTATAGGATGACCCAA",2,0,NA,NA,NA,NA,NA,NA,"stop","L5S P54M T63F K114V E141*",5
"lib2","SARS-CoV-2","TTATAGGATTACGATG",5,115.22,7.05,-3.78,0.14,1.5,1.13,0,">1 nonsynonymous","N120S C150S",2
"lib2","SARS-CoV-2","TTATAGGATTTATCTG",4,85.82,9.89,-0.95,0.03,2.84,1.1,0,">1 nonsynonymous","K56M N118S",2
"lib2","SARS-CoV-2","TTATAGGTATTCGTCA",1,20.7,7.33,-3.51,0.33,1.5,1.15,0.05,"1 nonsynonymous","V181N",1
"lib2","SARS-CoV-2","TTATAGGTTCCGAAAA",14,82.09,8.4,-2.43,0.16,1.5,1.08,0.01,"1 nonsynonymous","D137W",1
"lib2","SARS-CoV-2","TTATAGGTTCGTGAGG",3,21.3,10.82,-0.02,0.06,2.96,1.05,0,"1 nonsynonymous","T140A",1
"lib2","SARS-CoV-2","TTATAGTGGGTAATGC",11,1.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107L K128P S164I",3
"lib2","SARS-CoV-2","TTATAGTTCCACGAAC",10,90.39,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S29E S129L Y175V",3
"lib2","SARS-CoV-2","TTATAGTTTTACGCAA",2,27.91,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N4R V20W V52I",3
"lib2","SARS-CoV-2","TTATATAAACACAAAC",2,5.49,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTATATAAAGTATAAA",5,3.72,NA,NA,NA,NA,NA,NA,"stop","F44* C61M N92F G117D L131C",5
"lib2","SARS-CoV-2","TTATATAAGAAAAACT",4,45.27,9.14,-1.69,0.07,2.93,1.08,0,">1 nonsynonymous","G166L T201S",2
"lib2","SARS-CoV-2","TTATATAAGCATTCAG",2,4.04,NA,NA,NA,NA,NA,NA,"stop","L5A S45P D90* L122A S184C T201L",6
"lib2","SARS-CoV-2","TTATATAATCTGCCTA",1,11.14,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","I28P P54C F160T",3
"lib2","SARS-CoV-2","TTATATACAAAATACA",4,95.32,8.5,-2.34,0.1,2.77,1.13,0,">1 nonsynonymous","C61R G146C",2
"lib2","SARS-CoV-2","TTATATACCATGTTCT",4,125.59,10.85,0.02,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATATAGATAGAATG",3,2.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G152E F185S",2
"lib2","SARS-CoV-2","TTATATAGTAAACCCA",4,7.09,6,-4.84,2,3,1.08,0,">1 nonsynonymous","T15H G51C F134R T148N",4
"lib2","SARS-CoV-2","TTATATATACCAATGA",4,51.95,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","V37H N64S G166S V181N",4
"lib2","SARS-CoV-2","TTATATATATTAGACC",15,114.48,9.1,-1.73,0.16,1.5,1.02,0.01,">1 nonsynonymous","V77R A81K",2
"lib2","SARS-CoV-2","TTATATCAAGTCCAGT",11,230.03,10.66,-0.17,0.04,2.91,1.1,0,">1 nonsynonymous","L60T A190E",2
"lib2","SARS-CoV-2","TTATATCAATAATTCA",11,72.92,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","D34P F44P R127D",3
"lib2","SARS-CoV-2","TTATATCACGATCTTC",13,36.17,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","T3S E76T G83V N92F W106K T201G",6
"lib2","SARS-CoV-2","TTATATCAGGCCCTAT",3,44.12,10.57,-0.26,0.08,2.87,1.1,0,"1 nonsynonymous","G9L",1
"lib2","SARS-CoV-2","TTATATCATGTATCAA",3,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F I88R S108V P149Q G196S",5
"lib2","SARS-CoV-2","TTATATCCAAACAAAT",6,34.79,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G51R N58Y F99Y I142W Q168R",5
"lib2","SARS-CoV-2","TTATATCCTATCTAGT",6,3.04,NA,NA,NA,NA,NA,NA,"stop","K87* P149L",2
"lib2","SARS-CoV-2","TTATATCCTTGGAAAT",6,11.6,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","T55V I80M A105K",3
"lib2","SARS-CoV-2","TTATATCTAACGTGCA",6,2.37,NA,NA,NA,NA,NA,NA,"stop","A67S S113*",2
"lib2","SARS-CoV-2","TTATATCTCAGAAATA",7,52.97,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6S K48R Y66L G152V T170H",5
"lib2","SARS-CoV-2","TTATATCTGGTTTTCA",8,55.28,10.82,-0.02,0.05,2.92,1.07,0,">1 nonsynonymous","P54L E141A S147N N151F",4
"lib2","SARS-CoV-2","TTATATCTGTTCTGCA",12,233.98,10.19,-0.64,0.02,2.9,1.02,0,">1 nonsynonymous","V11L K26W V194I P197E",4
"lib2","SARS-CoV-2","TTATATCTTTACAGTC",11,2.61,NA,NA,NA,NA,NA,NA,"stop","L5D D98Y Y143R F167* V173P P197I",6
"lib2","SARS-CoV-2","TTATATCTTTCCAATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12A W23Y A33P S41V D112T Y143L",6
"lib2","SARS-CoV-2","TTATATGACTGCTACA",2,20.21,7.4,-3.44,0.15,2.31,1.1,0.01,">1 nonsynonymous","C158K A190T",2
"lib2","SARS-CoV-2","TTATATGCATGAGTTA",2,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59W Y91E L95V P149K",4
"lib2","SARS-CoV-2","TTATATGCGTCCTATT",5,123.35,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","P82Y D90S T148I Y175K",4
"lib2","SARS-CoV-2","TTATATGCTACTGCCA",4,33.91,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A42D D98S W106L P149T P161C",5
"lib2","SARS-CoV-2","TTATATGTTCGGTTAA",12,117.98,10.81,-0.02,0.05,2.93,1.07,0,"1 nonsynonymous","T100M",1
"lib2","SARS-CoV-2","TTATATTAAACCCTTA",1,13.47,11.04,0.2,0.09,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATATTAACTCATAA",2,3.52,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTATATTAAGCAGGGG",8,102.49,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59L C150F",2
"lib2","SARS-CoV-2","TTATATTCAATGATGC",9,1.46,NA,NA,NA,NA,NA,NA,"stop","N58F R78F G86Q V103N N120Q R127*",6
"lib2","SARS-CoV-2","TTATATTCTTATCAAA",2,7.1,6,-4.84,2,1.5,1.03,0,">1 nonsynonymous","T3S D59F V103W G117R",4
"lib2","SARS-CoV-2","TTATATTTAATTTAAG",5,14.64,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","A14V L95E S129C",3
"lib2","SARS-CoV-2","TTATCAAAAATAGAGC",5,25.81,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","V52L Y91L Y121P K128T C158R",5
"lib2","SARS-CoV-2","TTATCAAAAATTTCAG",1,9.61,6.31,-4.52,0.57,3,1.1,0.01,">1 nonsynonymous","V11F V77S Q84L Y93P F167N",5
"lib2","SARS-CoV-2","TTATCAAAAGTACGAC",7,59.69,10.71,-0.12,0.06,2.93,1.07,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","TTATCAAAATATTAAG",3,20.18,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V65L G101F A145R C150M Y175P",5
"lib2","SARS-CoV-2","TTATCAAACCAAGATA",4,62.02,10.17,-0.67,0.07,2.69,1,0,">1 nonsynonymous","Y50F D59L D97E",3
"lib2","SARS-CoV-2","TTATCAAAGCTTACAA",4,39.21,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","A14D G51L Y119R Y143H P149I",5
"lib2","SARS-CoV-2","TTATCAACAATACACA",1,3.94,NA,NA,NA,NA,NA,NA,"stop","W106* L111I",2
"lib2","SARS-CoV-2","TTATCAACATCTGTGA",10,51.86,10.85,0.01,0.05,2.94,1.08,0,">1 nonsynonymous","V37M N120H",2
"lib2","SARS-CoV-2","TTATCAACCAAAACAT",1,2.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123I G146C",2
"lib2","SARS-CoV-2","TTATCAACCAGTGTAA",1,19.44,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","P82Y T148K V153G",3
"lib2","SARS-CoV-2","TTATCAATAATAATTT",6,114.74,10.54,-0.29,0.06,2.85,1.09,0,"1 nonsynonymous","D98Y",1
"lib2","SARS-CoV-2","TTATCAATCTACTCAA",3,59.66,9.04,-1.79,0.26,1.5,1.04,0.04,">1 nonsynonymous","R27W S129E L162R",3
"lib2","SARS-CoV-2","TTATCAATGCAGAAAC",2,0.1,NA,NA,NA,NA,NA,NA,"stop","P149S G155*",2
"lib2","SARS-CoV-2","TTATCAATTCAGCAGT",2,5.76,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123G V173L",2
"lib2","SARS-CoV-2","TTATCACAACTGAATA",2,1.5,NA,NA,NA,NA,NA,NA,"stop","V52* K94Y Y165E",3
"lib2","SARS-CoV-2","TTATCACATACGAACG",9,0.65,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41T R127N",2
"lib2","SARS-CoV-2","TTATCACTATACTGTT",3,42.24,10.11,-0.72,0.1,2.7,1.05,0.01,">1 nonsynonymous","D34V T63E",2
"lib2","SARS-CoV-2","TTATCACTTCGGTGCC",6,82.49,6.03,-4.81,0.59,1.66,1.18,0.01,">1 nonsynonymous","F44A K94V N151L",3
"lib2","SARS-CoV-2","TTATCACTTTGCGAAT",4,102.27,6.07,-4.77,0.49,1.5,1.12,0,"1 nonsynonymous","Y175G",1
"lib2","SARS-CoV-2","TTATCAGAAAAGGGGG",8,7.07,9.78,-1.05,0.17,2.49,1.03,0.01,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","TTATCAGTACAAATAT",20,394.47,10.83,0,0.05,2.91,1.1,0,"1 nonsynonymous","S43A",1
"lib2","SARS-CoV-2","TTATCATGATCATACC",4,3.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15V P54D C61M A67H",4
"lib2","SARS-CoV-2","TTATCATGATTAAAGG",5,150.4,10.61,-0.23,0.04,2.96,1.06,0,">1 nonsynonymous","S45A G146S T201K",3
"lib2","SARS-CoV-2","TTATCATTATGAGCCG",2,14.96,10.84,0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATCATTTTTTAAGG",7,159.99,10.2,-0.64,0.04,2.72,1.05,0,">1 nonsynonymous","N1L V37Y S45K",3
"lib2","SARS-CoV-2","TTATCCAAATCCTCTT",5,79.64,6,-4.84,1.99,1.5,1.2,0.02,">1 nonsynonymous","N92L Y159L",2
"lib2","SARS-CoV-2","TTATCCAACTCTAAAG",1,99.39,9.75,-1.09,0.07,2.31,1.02,0,">1 nonsynonymous","V11G R27E",2
"lib2","SARS-CoV-2","TTATCCACAGAAACCT",5,42.31,10.38,-0.46,0.07,2.83,1.09,0,">1 nonsynonymous","N4S E10H",2
"lib2","SARS-CoV-2","TTATCCACATCCCTGT",7,228.71,10.21,-0.63,0.04,2.81,1.05,0,">1 nonsynonymous","K56Q A105V S147Q",3
"lib2","SARS-CoV-2","TTATCCACCACTAGGA",13,98.08,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5G F17Y T63D D90Y N92T V103I S108Y I138S K198N T201H",10
"lib2","SARS-CoV-2","TTATCCATAATATGCA",3,20.37,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S36P T55Y N92T L162Q",4
"lib2","SARS-CoV-2","TTATCCCAAAAAATGA",8,32.8,9.17,-1.67,0.18,1.64,1.11,0.01,">1 nonsynonymous","P7H F99H",2
"lib2","SARS-CoV-2","TTATCCCAAATTCACT",6,39.23,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","I88L K94V Y121T",3
"lib2","SARS-CoV-2","TTATCCCACGAATAAA",6,160.6,10.81,-0.03,0.05,2.85,1.17,0,"synonymous","",0
"lib2","SARS-CoV-2","TTATCCCACTATTACA",2,21.31,8.49,-2.35,0.1,2.61,1,0,">1 nonsynonymous","A42G N58S R136H Q168I",4
"lib2","SARS-CoV-2","TTATCCCATAAGGTCA",20,349.52,10.62,-0.22,0.03,2.88,1.11,0,"1 nonsynonymous","D98R",1
"lib2","SARS-CoV-2","TTATCCCCCTGAGATA",1,17.83,6.28,-4.56,0.38,1.5,1.05,0.01,">1 nonsynonymous","G86D D98V",2
"lib2","SARS-CoV-2","TTATCCCCGAAGAACA",9,154.67,10.76,-0.08,0.03,2.97,1.05,0,"1 nonsynonymous","A18Q",1
"lib2","SARS-CoV-2","TTATCCCTATGGGCGT",2,91.73,9.87,-0.96,0.15,2.65,1.19,0.01,"1 nonsynonymous","Y123N",1
"lib2","SARS-CoV-2","TTATCCCTTCAAAATC",6,25.77,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","P54Y C61T I88D K128N",4
"lib2","SARS-CoV-2","TTATCCGTGCAAAAGA",4,53.28,7.51,-3.33,0.15,1.52,1.13,0.01,">1 nonsynonymous","K26M Y39D S45H Q144R T170F",5
"lib2","SARS-CoV-2","TTATCCTAAACCGCAG",6,0.52,NA,NA,NA,NA,NA,NA,"stop","N92D S139R P169*",3
"lib2","SARS-CoV-2","TTATCCTACACAGCAA",11,116.39,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","N4F F12L R16P Y21L I28T V77E K94Q N107S",8
"lib2","SARS-CoV-2","TTATCCTCTAGAAGCA",18,6.38,NA,NA,NA,NA,NA,NA,"stop","T3C D59*",2
"lib2","SARS-CoV-2","TTATCGAAACGGCCCA",8,7.65,NA,NA,NA,NA,NA,NA,"stop","P82* E135*",2
"lib2","SARS-CoV-2","TTATCGACGTGCTATA",9,94.59,7.68,-3.16,0.16,1.55,1.07,0.01,">1 nonsynonymous","V11C Y119A I138S",3
"lib2","SARS-CoV-2","TTATCGAGGAAGCTCT",3,57.15,10.59,-0.25,0.03,2.98,1.04,0,">1 nonsynonymous","G152C P197R",2
"lib2","SARS-CoV-2","TTATCGAGGGCTTCCG",5,98.45,10.81,-0.02,0.05,2.88,1.11,0,">1 nonsynonymous","T55S S147R",2
"lib2","SARS-CoV-2","TTATCGAGTAAATGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17L K128R P161V",3
"lib2","SARS-CoV-2","TTATCGATATGTGAAT",7,192.72,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","P177L",1
"lib2","SARS-CoV-2","TTATCGATGAGCAAAA",1,1.19,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L183D",1
"lib2","SARS-CoV-2","TTATCGCGATACATAG",5,0.13,NA,NA,NA,NA,NA,NA,"stop","N64A R127* F134L",3
"lib2","SARS-CoV-2","TTATCGCGGACATATT",4,0.4,NA,NA,NA,NA,NA,NA,"stop","T3A A42T D68* S129N",4
"lib2","SARS-CoV-2","TTATCGCTACAGAAGG",4,21.01,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F62L K94R N107Y L122S",4
"lib2","SARS-CoV-2","TTATCGCTACTTAACT",1,77.35,9.98,-0.86,0.09,2.6,1.07,0,">1 nonsynonymous","E10S E154N A190R",3
"lib2","SARS-CoV-2","TTATCGCTCTCAAGAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V37S Y91F S113*",3
"lib2","SARS-CoV-2","TTATCGCTTTTGACCT",1,10.92,6,-4.84,2,3,1.03,0,">1 nonsynonymous","R25L G101A V173E",3
"lib2","SARS-CoV-2","TTATCGGCAAAATTAA",13,127.52,9.39,-1.44,0.08,1.83,1.08,0,">1 nonsynonymous","S108R T201K",2
"lib2","SARS-CoV-2","TTATCGGCGGTCAAGG",6,29.88,6.06,-4.77,1.8,1.5,1.18,0.06,"1 nonsynonymous","R124G",1
"lib2","SARS-CoV-2","TTATCGGGCGCAGCTA",9,20.63,6,-4.84,1.23,3,1.15,0.02,">1 nonsynonymous","T15S A42L R73W",3
"lib2","SARS-CoV-2","TTATCGGTTAGTATGA",14,5.35,NA,NA,NA,NA,NA,NA,"stop","A89S D98I G146* G152V",4
"lib2","SARS-CoV-2","TTATCGGTTCAGTCTC",4,74.66,10.66,-0.17,0.03,2.99,1.01,0,"1 nonsynonymous","R78F",1
"lib2","SARS-CoV-2","TTATCGTAGAGGAGAA",2,59.56,10.82,-0.01,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATCGTCCACAGTTC",6,51.93,7.68,-3.16,0.34,1.5,1.15,0.05,">1 nonsynonymous","V11Q D90F F156V",3
"lib2","SARS-CoV-2","TTATCGTGACCGAATT",6,65.66,6,-4.84,2,1.8,1.16,0,">1 nonsynonymous","F12L K87L G146L G166T",4
"lib2","SARS-CoV-2","TTATCGTGCGCGTGCT",8,79.91,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","G9S V37D L57Q L95C V153M",5
"lib2","SARS-CoV-2","TTATCGTTATAACACG",5,81.72,10.91,0.07,0.06,2.9,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATCGTTTAATTAAA",17,1.99,NA,NA,NA,NA,NA,NA,"stop","N64* D75G Q84V",3
"lib2","SARS-CoV-2","TTATCTAAAACGTACA",1,28.51,10.69,-0.14,0.06,2.94,1.07,0,"1 nonsynonymous","V153T",1
"lib2","SARS-CoV-2","TTATCTAAACTGGACG",3,24.76,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D59P V65S F99K V103G N171F",5
"lib2","SARS-CoV-2","TTATCTAAATATCCCT",17,7.3,NA,NA,NA,NA,NA,NA,"stop","T3* F62T F126S L187Y",4
"lib2","SARS-CoV-2","TTATCTACACATTGCT",1,0.24,NA,NA,NA,NA,NA,NA,"stop","L57* G101S G116V I138Q G146M",5
"lib2","SARS-CoV-2","TTATCTACACCAAACA",10,32.8,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","C49T S69L Q84F D90S G101T",5
"lib2","SARS-CoV-2","TTATCTACATGATACG",2,13.68,10.72,-0.12,0.07,2.91,1.1,0,">1 nonsynonymous","V11I D90C",2
"lib2","SARS-CoV-2","TTATCTACGACCGACA",10,286.24,10.56,-0.27,0.05,2.73,1.05,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","TTATCTACTGACAAAA",7,66.66,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","S45M D59S C158P",3
"lib2","SARS-CoV-2","TTATCTACTGGTACGA",8,101.68,6,-4.84,0.98,2.36,1.16,0,">1 nonsynonymous","I88D V103M R124K I138D C158D T201R",6
"lib2","SARS-CoV-2","TTATCTAGGTTCAACT",2,17.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3R I72K R124S Y165A S184T",5
"lib2","SARS-CoV-2","TTATCTATTATCTTGT",1,3.06,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2D P197T",2
"lib2","SARS-CoV-2","TTATCTCCAGCATAAG",3,41.54,10.19,-0.64,0.1,2.75,1.17,0,"1 nonsynonymous","L60P",1
"lib2","SARS-CoV-2","TTATCTCGCAAACCGG",2,13.94,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","W23S E76I",2
"lib2","SARS-CoV-2","TTATCTCGGCCTAACC",15,176.19,8.34,-2.49,0.12,2.89,1.04,0,">1 nonsynonymous","F156C T170G",2
"lib2","SARS-CoV-2","TTATCTCTGAAAGCCA",4,5.08,NA,NA,NA,NA,NA,NA,"stop","C61P F70* G83A",3
"lib2","SARS-CoV-2","TTATCTCTGAGGATCC",5,136.7,10.47,-0.36,0.03,2.95,1.05,0,">1 nonsynonymous","V173N H189I",2
"lib2","SARS-CoV-2","TTATCTGAAAAGATAT",10,203.22,9.97,-0.87,0.04,2.86,1.04,0,">1 nonsynonymous","C61Y G155H",2
"lib2","SARS-CoV-2","TTATCTGATTGGCCTG",3,2.72,NA,NA,NA,NA,NA,NA,"stop","I88*",1
"lib2","SARS-CoV-2","TTATCTGTCAAGCGAG",1,9.26,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","G83I L95F G152V",3
"lib2","SARS-CoV-2","TTATCTTCGAACACCT",8,0.64,NA,NA,NA,NA,NA,NA,"stop","A18S N118* K132V Y175C",4
"lib2","SARS-CoV-2","TTATCTTCGTACGCGA",1,9.89,10.88,0.04,0.1,3,1.02,0,"1 nonsynonymous","D98P",1
"lib2","SARS-CoV-2","TTATCTTGAACGCTAT",1,19.65,10.57,-0.26,0.08,2.89,1.12,0,"1 nonsynonymous","V115E",1
"lib2","SARS-CoV-2","TTATCTTGGCACAAAG",1,85.91,10.3,-0.53,0.04,2.92,1.05,0,"1 nonsynonymous","P169I",1
"lib2","SARS-CoV-2","TTATCTTGGCCAAAAT",8,62.95,6.26,-4.58,0.56,1.5,1.19,0.01,">1 nonsynonymous","Y119L F126T Q144M",3
"lib2","SARS-CoV-2","TTATCTTTCGTTACTG",5,15.42,8.56,-2.28,0.33,1.5,1.2,0.03,">1 nonsynonymous","L5Y P96Y",2
"lib2","SARS-CoV-2","TTATGAAAAACGTAAC",1,0.16,NA,NA,NA,NA,NA,NA,"stop","K48L Y119* G174V",3
"lib2","SARS-CoV-2","TTATGAAAATCAATTG",1,2.93,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44H F62V N130M",3
"lib2","SARS-CoV-2","TTATGAAACAAATGAT",8,56.07,6.31,-4.52,0.34,1.54,1.1,0.01,">1 nonsynonymous","L38F C158H",2
"lib2","SARS-CoV-2","TTATGAAAGTCACGTA",2,112.52,10.27,-0.57,0.05,2.79,1.08,0,"1 nonsynonymous","G51T",1
"lib2","SARS-CoV-2","TTATGAAAGTTACATA",8,141.72,9.97,-0.87,0.08,2.44,1.04,0,">1 nonsynonymous","A14L S139D",2
"lib2","SARS-CoV-2","TTATGAAATAGCACTC",3,33.41,10.92,0.08,0.05,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATGAACAAAAGGAA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","C61* W106H P133F Y165K V181L",5
"lib2","SARS-CoV-2","TTATGAACCTCCTACT",8,240.57,10.87,0.03,0.05,2.92,1.07,0,"1 nonsynonymous","F160A",1
"lib2","SARS-CoV-2","TTATGAATACAACCCC",2,29.22,10.8,-0.04,0.07,2.86,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATGACACTAAAAGG",2,15.03,10.85,0.01,0.07,2.94,1.04,0,"1 nonsynonymous","T100N",1
"lib2","SARS-CoV-2","TTATGACAGACAATGA",3,33.86,6,-4.84,0.84,2.39,1.19,0.01,">1 nonsynonymous","R136F P149H Q168L",3
"lib2","SARS-CoV-2","TTATGACATGACCAAA",4,72.46,10.72,-0.11,0.04,2.93,1.06,0,"1 nonsynonymous","V173G",1
"lib2","SARS-CoV-2","TTATGACATTGAGACG",2,21.3,9.71,-1.12,0.11,2.37,1.06,0,">1 nonsynonymous","K94Y S129E",2
"lib2","SARS-CoV-2","TTATGACCACAGGCAC",4,49.43,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","R127V G152W A190S",3
"lib2","SARS-CoV-2","TTATGACTCTAGCAGA",6,0.76,NA,NA,NA,NA,NA,NA,"stop","S43Y P54T L60H Y66* E141K",5
"lib2","SARS-CoV-2","TTATGACTTAGGTCAA",8,121.04,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y35R C61T T85S P177I",4
"lib2","SARS-CoV-2","TTATGACTTCAGCAGT",7,127.11,10.84,0.01,0.04,2.97,1.05,0,"1 nonsynonymous","D90N",1
"lib2","SARS-CoV-2","TTATGAGCAACCTTGC",4,1.68,NA,NA,NA,NA,NA,NA,"stop","L125* E141F",2
"lib2","SARS-CoV-2","TTATGAGCCTCAAGGC",5,0.68,NA,NA,NA,NA,NA,NA,"stop","G51F G116* G152W R179E",4
"lib2","SARS-CoV-2","TTATGAGGTATCGAGT",3,127.92,6,-4.84,2,1.5,1.13,0.01,"1 nonsynonymous","P177I",1
"lib2","SARS-CoV-2","TTATGAGTGATATAGT",1,8.77,9.77,-1.07,0.17,2.16,1,0.02,">1 nonsynonymous","S45W I104C C195R",3
"lib2","SARS-CoV-2","TTATGATACCCCATCG",3,77.98,10.79,-0.05,0.03,2.92,1.1,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","TTATGATACTCCTTAA",1,16.2,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","G9P L57F T85F F99L",4
"lib2","SARS-CoV-2","TTATGATATGTAAGTA",5,28.5,6,-4.84,2,3,1.12,0,">1 nonsynonymous","A22E G51A P82Y I142M P169I T201V",6
"lib2","SARS-CoV-2","TTATGATCCAGATGAA",1,13.04,9.33,-1.51,0.1,3,1.03,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","TTATGATCCCTCACTA",4,0.22,NA,NA,NA,NA,NA,NA,"stop","E10K F44K D68* K87L W106P",5
"lib2","SARS-CoV-2","TTATGATCTACGTCCG",6,71.98,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","L5S G51P S139T Q144M Q176V",5
"lib2","SARS-CoV-2","TTATGATGCGGCCACG",6,63.48,11.09,0.25,0.05,2.92,1.09,0,">1 nonsynonymous","G9S Q168W",2
"lib2","SARS-CoV-2","TTATGATGGATTACAC",2,71.69,9.89,-0.95,0.06,2.97,1.03,0,">1 nonsynonymous","Y119F T201M",2
"lib2","SARS-CoV-2","TTATGATGTAACTACA",13,134.99,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","C6G F12C K48I A105V T201N",5
"lib2","SARS-CoV-2","TTATGATTGCCTAGTA",7,164.34,10.77,-0.06,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATGATTTAAGACAT",4,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34F A42M K87Y P96Q",4
"lib2","SARS-CoV-2","TTATGATTTTCTCAAC",1,31.51,10.79,-0.04,0.08,2.91,1.12,0,"1 nonsynonymous","P149N",1
"lib2","SARS-CoV-2","TTATGCAAAACATTGT",2,28.62,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C49T T100L C158F F167C",4
"lib2","SARS-CoV-2","TTATGCAAACATTCAT",11,152.17,7.46,-3.37,0.22,1.5,1.12,0.01,">1 nonsynonymous","V32F K87M D97Y P133R",4
"lib2","SARS-CoV-2","TTATGCAACAACTCAA",3,61.63,10.79,-0.04,0.05,2.94,1.09,0,"1 nonsynonymous","V173H",1
"lib2","SARS-CoV-2","TTATGCAAGATGAGGC",7,166.8,10.56,-0.27,0.05,2.89,1.02,0,">1 nonsynonymous","K26N V37T",2
"lib2","SARS-CoV-2","TTATGCACCGATATTA",2,29.48,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y35R D98G C102L S147I V173H",5
"lib2","SARS-CoV-2","TTATGCAGTATAGCAT",14,150.96,10.79,-0.05,0.06,2.83,1.18,0,"synonymous","",0
"lib2","SARS-CoV-2","TTATGCAGTTAACCGA",1,0.09,NA,NA,NA,NA,NA,NA,"stop","A42*",1
"lib2","SARS-CoV-2","TTATGCATAGCTCTCA",1,5.39,9.15,-1.69,0.26,2.42,1.07,0.01,">1 nonsynonymous","G9Y N64Y Y91C T100M F134H",5
"lib2","SARS-CoV-2","TTATGCATCAGCCAAT",9,74.05,10.28,-0.55,0.03,2.91,1,0,">1 nonsynonymous","A14I E141S",2
"lib2","SARS-CoV-2","TTATGCATCCAAACGT",1,1.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y175E",1
"lib2","SARS-CoV-2","TTATGCATTTAATCAA",4,54.84,10.59,-0.25,0.05,2.93,1.02,0,">1 nonsynonymous","A22Q N40G D97M T201K",4
"lib2","SARS-CoV-2","TTATGCCAAATTATAA",2,16.36,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C61M S69G N107V V180H",4
"lib2","SARS-CoV-2","TTATGCCCAGGTACAC",3,23.03,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","L95R Y178F",2
"lib2","SARS-CoV-2","TTATGCCCGGGGTCAG",9,37.81,10.92,0.09,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATGCCGTTTTATTA",8,1.15,NA,NA,NA,NA,NA,NA,"stop","I72R Y165*",2
"lib2","SARS-CoV-2","TTATGCCTAAAATTCC",6,6.99,6.19,-4.65,0.47,1.5,1.12,0.01,">1 nonsynonymous","N40K Y93S F99S N107M N118I G172N L183Q",7
"lib2","SARS-CoV-2","TTATGCGCTCATTAGC",2,15.32,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5A I80G",2
"lib2","SARS-CoV-2","TTATGCTAAAGAACCA",5,70.74,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G9F V32N P54L K56V G86W Y119V",6
"lib2","SARS-CoV-2","TTATGCTATCCTAAAC",1,0.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42V P96T D112N G155P",4
"lib2","SARS-CoV-2","TTATGCTGACACATGT",2,29.87,9.1,-1.73,0.09,2.34,1.07,0,">1 nonsynonymous","Y91S E154L S200M",3
"lib2","SARS-CoV-2","TTATGGAATCCATAAC",9,206.6,9.57,-1.27,0.06,2.04,1.05,0,">1 nonsynonymous","G51I N120R",2
"lib2","SARS-CoV-2","TTATGGACTTTGTGGA",2,4.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R25G",1
"lib2","SARS-CoV-2","TTATGGAGTCATGCAC",1,2.24,NA,NA,NA,NA,NA,NA,"stop","C6* K56L K94Y N118A",4
"lib2","SARS-CoV-2","TTATGGATAGCGGGAC",4,58.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I72R P149W",2
"lib2","SARS-CoV-2","TTATGGATAGGCACTT",8,185.99,10.03,-0.81,0.06,2.27,1.02,0,">1 nonsynonymous","V52S I104V",2
"lib2","SARS-CoV-2","TTATGGATTTGAGATT",10,0.37,NA,NA,NA,NA,NA,NA,"stop","L57* Y93L",2
"lib2","SARS-CoV-2","TTATGGCAGAGAACGT",4,15.2,9.73,-1.11,0.15,2.59,1.01,0.01,">1 nonsynonymous","C6S A18S S43F N64G T148V V153K",6
"lib2","SARS-CoV-2","TTATGGCATCGCGAAA",1,11.64,10.75,-0.09,0.04,3,1.03,0,"1 nonsynonymous","R78T",1
"lib2","SARS-CoV-2","TTATGGCCAGCCGGTC",3,58.07,10.89,0.06,0.05,2.93,1.09,0,"1 nonsynonymous","V37E",1
"lib2","SARS-CoV-2","TTATGGCCGAGTACCG",5,12.26,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","Y66F T85K C102T",3
"lib2","SARS-CoV-2","TTATGGCTCACAGAGG",9,76.35,10.7,-0.14,0.07,2.96,1.05,0,"1 nonsynonymous","G83C",1
"lib2","SARS-CoV-2","TTATGGGCAATCTAAG",2,23.22,10.23,-0.61,0.07,2.79,1.01,0,">1 nonsynonymous","A81V K132N",2
"lib2","SARS-CoV-2","TTATGGGCACATGAAG",2,27.9,6.01,-4.83,1.26,1.5,1.08,0.03,">1 nonsynonymous","L131T I142E P149E",3
"lib2","SARS-CoV-2","TTATGGGCCTTAATCT",4,23.57,10.06,-0.77,0.1,2.23,1,0,">1 nonsynonymous","N4V D97F E141Y",3
"lib2","SARS-CoV-2","TTATGGGGATCAATCG",3,15.58,7.2,-3.63,0.26,1.5,1.03,0.03,">1 nonsynonymous","N4V G51S K94E V103D",4
"lib2","SARS-CoV-2","TTATGGGGCAAACAAA",2,6.95,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","P82L K94D E154S",3
"lib2","SARS-CoV-2","TTATGGGGGTGAACAA",1,40.71,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N24L G51C K56L C61L D68M I88G T100P N110K T140V S184R",10
"lib2","SARS-CoV-2","TTATGGTGAAACTTCG",13,40.54,6.01,-4.83,1.02,1.5,1.15,0.02,">1 nonsynonymous","C6K L60M G86L I138T F160G",5
"lib2","SARS-CoV-2","TTATGGTTTATTGAGG",2,6.05,6.26,-4.58,0.83,1.5,1.12,0.05,">1 nonsynonymous","L5N F44I I104Q",3
"lib2","SARS-CoV-2","TTATGTAACTCGATCC",4,6.52,6,-4.84,2,1.5,1.03,0.01,">1 nonsynonymous","T46S T63A G86H V103Q",4
"lib2","SARS-CoV-2","TTATGTAATTCCACGA",2,14.2,7.55,-3.29,0.53,1.5,1.02,0.07,">1 nonsynonymous","Y21M F44V A67F E141S Y175E",5
"lib2","SARS-CoV-2","TTATGTACAAAGCATA",16,163.63,10.23,-0.6,0.05,2.6,1.03,0,">1 nonsynonymous","T15S E135Y",2
"lib2","SARS-CoV-2","TTATGTACGATAAAGT",2,9.37,10.47,-0.37,0.18,2.38,1.16,0.01,"1 nonsynonymous","D97F",1
"lib2","SARS-CoV-2","TTATGTACGTAAACAA",9,192.3,10.7,-0.13,0.02,2.94,1.05,0,">1 nonsynonymous","T63N S113A",2
"lib2","SARS-CoV-2","TTATGTCAAAAAAATA",5,55.1,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6S L57S R124H",3
"lib2","SARS-CoV-2","TTATGTCAAAACAGAT",4,49.34,9.37,-1.46,0.12,2.4,1.15,0.01,">1 nonsynonymous","C61P D98F F126M I142M",4
"lib2","SARS-CoV-2","TTATGTCACAACGTAG",6,75.15,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y35W A89S R124W",3
"lib2","SARS-CoV-2","TTATGTCACACACTGT",2,15.94,8.79,-2.04,0.06,3,1.05,0,">1 nonsynonymous","Q84L L125R",2
"lib2","SARS-CoV-2","TTATGTCGCCAATTCC",17,184.84,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I28S N92L P149T F167V V181M",5
"lib2","SARS-CoV-2","TTATGTCGTTGCTCAA",4,2.49,NA,NA,NA,NA,NA,NA,"stop","G9L R27* V37* L95R Y121L K198F",6
"lib2","SARS-CoV-2","TTATGTCTGAATGAAA",3,26.3,7.17,-3.66,0.41,1.5,1.04,0.05,">1 nonsynonymous","L57S N64V Y91M N110I E141M",5
"lib2","SARS-CoV-2","TTATGTCTTTACGTCA",2,12.08,10.25,-0.59,0.07,2.87,1.13,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","TTATGTGTATAGGTAA",2,1.67,NA,NA,NA,NA,NA,NA,"stop","G83N I88* A105S",3
"lib2","SARS-CoV-2","TTATGTTATACCAGGA",4,7.36,NA,NA,NA,NA,NA,NA,"stop","Y35T F44* L95Q C102D",4
"lib2","SARS-CoV-2","TTATGTTCAAACATCA",7,390.31,10.61,-0.23,0.04,2.86,1.13,0,"1 nonsynonymous","N120Y",1
"lib2","SARS-CoV-2","TTATGTTCAAACTTAT",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18L F62E",2
"lib2","SARS-CoV-2","TTATGTTCCAATCAAT",5,27.66,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F70R I104T K128G",3
"lib2","SARS-CoV-2","TTATGTTGTCTTGTTC",3,34.31,10.69,-0.14,0.04,2.94,1.08,0,"1 nonsynonymous","T85I",1
"lib2","SARS-CoV-2","TTATTAAAAAAGTCGT",3,12.53,10.7,-0.14,0.04,3,1,0,"1 nonsynonymous","A33V",1
"lib2","SARS-CoV-2","TTATTAAAAATGATGG",4,25.31,10.83,0,0.06,2.96,1.03,0,">1 nonsynonymous","S43H Q144R",2
"lib2","SARS-CoV-2","TTATTAAAATTTACTT",4,18.98,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","S19I T100P",2
"lib2","SARS-CoV-2","TTATTAAACCGATCCT",2,113.36,10.09,-0.74,0.08,2.36,1.07,0,">1 nonsynonymous","N13R T140R Q144S",3
"lib2","SARS-CoV-2","TTATTAAACTGCATGG",4,116.64,9.55,-1.29,0.07,2.11,1.04,0,">1 nonsynonymous","I28T T55N K114M",3
"lib2","SARS-CoV-2","TTATTAAAGCTGAAAT",2,33.68,10.05,-0.79,0.1,2.35,1.05,0.01,"1 nonsynonymous","L162T",1
"lib2","SARS-CoV-2","TTATTAAATTACGACA",3,27.22,9.72,-1.11,0.1,2.18,1.01,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TTATTAACAATTCCAA",11,4.58,NA,NA,NA,NA,NA,NA,"stop","G51I N64* Y123H Y143* K199H",5
"lib2","SARS-CoV-2","TTATTAACACGATTGT",4,0.11,NA,NA,NA,NA,NA,NA,"stop","N4* A18F Y35L D90R",4
"lib2","SARS-CoV-2","TTATTAACATGGCCGT",5,96.74,6.31,-4.53,0.25,1.5,1.1,0,">1 nonsynonymous","G9T I138A F167L",3
"lib2","SARS-CoV-2","TTATTAACCATAATAT",2,3.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N118L Q144S",2
"lib2","SARS-CoV-2","TTATTAACGAACCGAA",8,44.39,10.78,-0.05,0.06,2.92,1.1,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","TTATTAACGTTGTTGA",1,39.82,6,-4.84,1.86,1.5,1.09,0.01,">1 nonsynonymous","C31E K48A C61N E135V E154S",5
"lib2","SARS-CoV-2","TTATTAACTGGTAACA",12,52.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","I88S",1
"lib2","SARS-CoV-2","TTATTAATGACTAACT",5,111.31,8.26,-2.58,0.17,1.5,1.08,0.01,">1 nonsynonymous","Y35S V77C D98N A145V",4
"lib2","SARS-CoV-2","TTATTAATGGCAGAGG",11,86.46,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R124C P149R",2
"lib2","SARS-CoV-2","TTATTAATTAACTGTG",3,45.01,10.8,-0.04,0.09,2.86,1.09,0,"1 nonsynonymous","H189V",1
"lib2","SARS-CoV-2","TTATTAATTAGTAATT",5,24.26,9.83,-1.01,0.16,1.94,1.16,0.01,">1 nonsynonymous","D34R K48M",2
"lib2","SARS-CoV-2","TTATTAATTATGACCA",4,55.41,8.18,-2.66,0.36,1.5,1.01,0.05,">1 nonsynonymous","F12I F62K G83N D97M P191I",5
"lib2","SARS-CoV-2","TTATTAATTCAGTAAC",6,1.11,NA,NA,NA,NA,NA,NA,"stop","C6S N120*",2
"lib2","SARS-CoV-2","TTATTAATTCCAACCG",2,4.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9L F126Y P161K",3
"lib2","SARS-CoV-2","TTATTAATTCTTGCTG",4,121.5,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R25V C61H N157D",3
"lib2","SARS-CoV-2","TTATTAATTTAATAAG",7,144.35,9.97,-0.87,0.05,2.84,1.06,0,"1 nonsynonymous","Y121V",1
"lib2","SARS-CoV-2","TTATTACAACTGTCTT",2,79.56,10.78,-0.06,0.04,2.99,1.03,0,">1 nonsynonymous","C61A T148S",2
"lib2","SARS-CoV-2","TTATTACACTCTGATG",4,75.32,10.3,-0.53,0.05,2.9,1.03,0,">1 nonsynonymous","G9M D98A",2
"lib2","SARS-CoV-2","TTATTACAGAATCAAT",15,206.24,6.73,-4.11,0.32,1.5,1.12,0.02,">1 nonsynonymous","S113L T140G",2
"lib2","SARS-CoV-2","TTATTACAGATCAAAC",3,58.57,10.14,-0.69,0.03,2.9,1.09,0,">1 nonsynonymous","C31K S43I",2
"lib2","SARS-CoV-2","TTATTACCAAGTTGAG",1,73.53,9.99,-0.85,0.05,2.82,1.04,0,">1 nonsynonymous","S41V Y121M",2
"lib2","SARS-CoV-2","TTATTACCCTGACAAC",3,6.17,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","T3S C102K",2
"lib2","SARS-CoV-2","TTATTACCTAATATGC",11,144.65,10.68,-0.15,0.04,2.96,1.06,0,">1 nonsynonymous","L5S P169K K198R",3
"lib2","SARS-CoV-2","TTATTACCTGGTCCCA",2,26.73,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F126P E141C N157V",3
"lib2","SARS-CoV-2","TTATTACCTTAGTCAC",2,0.55,NA,NA,NA,NA,NA,NA,"stop","N40*",1
"lib2","SARS-CoV-2","TTATTACCTTTCATCA",1,32.78,9.91,-0.93,0.13,2.33,1,0,"1 nonsynonymous","F12Y",1
"lib2","SARS-CoV-2","TTATTACGCCGCGACT",4,0.12,NA,NA,NA,NA,NA,NA,"stop","T55* G83F G117* T201S",4
"lib2","SARS-CoV-2","TTATTACGCTTGGCAA",4,0.45,NA,NA,NA,NA,NA,NA,"stop","K26F C61* G83H",3
"lib2","SARS-CoV-2","TTATTACGGATCCGGG",14,147.88,10.15,-0.68,0.05,2.45,1.05,0,">1 nonsynonymous","N4Q L131A P197W",3
"lib2","SARS-CoV-2","TTATTAGAAAAAGCCT",7,83.76,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","N24T V71A D112N F156R",4
"lib2","SARS-CoV-2","TTATTAGAGTAGTGAA",1,9.55,9.38,-1.45,0.16,2.13,1,0.01,">1 nonsynonymous","F8D A33R K199P",3
"lib2","SARS-CoV-2","TTATTAGTACTAACTC",6,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50D G116L",2
"lib2","SARS-CoV-2","TTATTAGTACTCGGCA",5,60.17,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C102F N157A",2
"lib2","SARS-CoV-2","TTATTAGTCGAACATG",10,9.54,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","I2Y L38S F99L V153K",4
"lib2","SARS-CoV-2","TTATTAGTTCTTAACT",7,45.3,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","F44N P82W W106S P149Y C158L",5
"lib2","SARS-CoV-2","TTATTATACATCTGCT",5,11.08,NA,NA,NA,NA,NA,0.2,"1 nonsynonymous","F99R",1
"lib2","SARS-CoV-2","TTATTATATCCAACCT",6,16.21,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90H W106R T148L A192T",4
"lib2","SARS-CoV-2","TTATTATATCCCACGT",10,1.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88C C102G Y121V C150R Y159G",5
"lib2","SARS-CoV-2","TTATTATCAATAAAGC",2,10.97,6.26,-4.58,2,1.5,1.13,0.06,">1 nonsynonymous","F47S L60G Y91T Y159F S200P",5
"lib2","SARS-CoV-2","TTATTATCAGCTATAG",11,242.29,9.8,-1.04,0.04,2.95,1.04,0,"1 nonsynonymous","T170Y",1
"lib2","SARS-CoV-2","TTATTATCCTGACACA",20,9.97,10.06,-0.78,0.28,2.79,1.02,0.03,">1 nonsynonymous","S19K S147F F160N P197N",4
"lib2","SARS-CoV-2","TTATTATGGCCCTTAA",4,42.33,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V11L L60P C102T G117A F134R N171A",6
"lib2","SARS-CoV-2","TTATTATGGTACAACA",3,32.92,7.47,-3.37,0.29,1.56,1.12,0.02,"1 nonsynonymous","C158G",1
"lib2","SARS-CoV-2","TTATTATTAATGGAAT",2,13.5,10.43,-0.4,0.1,2.9,1.05,0.01,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","TTATTATTACGCACAC",4,0,NA,NA,NA,NA,NA,NA,"stop","W23*",1
"lib2","SARS-CoV-2","TTATTATTCACCAGAT",3,80.8,6,-4.84,2,3,1.14,0,">1 nonsynonymous","E10L C61S V71W Y93G E141F P177C",6
"lib2","SARS-CoV-2","TTATTATTTCCAAGCC",2,10.89,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N58T V77K G117Q F160Y",4
"lib2","SARS-CoV-2","TTATTCAAATGAGAGA",1,5.08,9.38,-1.45,0.1,2.01,1.02,0,"1 nonsynonymous","P82T",1
"lib2","SARS-CoV-2","TTATTCAACTGCATAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N92Y V181K H189L",3
"lib2","SARS-CoV-2","TTATTCAAGCCTGAAC",2,65.86,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N40A P96R W106A S164F T201H",5
"lib2","SARS-CoV-2","TTATTCACACACGAAG",11,71.85,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V20T D34P Y39T K56Q F99L C158G",6
"lib2","SARS-CoV-2","TTATTCACCTCGATCA",7,32.61,10.87,0.03,0.06,3,1.03,0,"1 nonsynonymous","Y178H",1
"lib2","SARS-CoV-2","TTATTCACCTTTTCAA",15,127.99,10.75,-0.08,0.03,2.93,1.07,0,">1 nonsynonymous","P149S Q168A",2
"lib2","SARS-CoV-2","TTATTCACTTACCATA",3,32.21,10.27,-0.57,0.07,2.98,1.03,0,">1 nonsynonymous","P149L G152R",2
"lib2","SARS-CoV-2","TTATTCAGCTAGAAAT",7,110.81,9.62,-1.21,0.07,2.59,1.05,0,">1 nonsynonymous","R27V A145S S164L E186K A192E T201M",6
"lib2","SARS-CoV-2","TTATTCAGCTGATTAG",4,46.9,8.75,-2.09,0.25,1.5,1.25,0.03,">1 nonsynonymous","S36P W106K",2
"lib2","SARS-CoV-2","TTATTCATCACATATC",12,93.43,6,-4.84,2,3,1.13,0,">1 nonsynonymous","C49L C150S",2
"lib2","SARS-CoV-2","TTATTCATGAGTAAAA",5,49.68,10.62,-0.22,0.06,2.93,1.09,0,">1 nonsynonymous","N4S F8W N64T E141Y",4
"lib2","SARS-CoV-2","TTATTCCAATGAAATA",1,3.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P G86Q",2
"lib2","SARS-CoV-2","TTATTCCATTGAGATT",2,25.69,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L5W C158I",2
"lib2","SARS-CoV-2","TTATTCCTACAACATC",2,26.2,9.57,-1.26,0.08,2.9,1.09,0,">1 nonsynonymous","T3S N110R Y143V",3
"lib2","SARS-CoV-2","TTATTCCTATACCAGA",1,24.81,6.04,-4.8,1.13,1.5,1.1,0.04,">1 nonsynonymous","K26S A42V G146Q F167I",4
"lib2","SARS-CoV-2","TTATTCCTATAGTCAT",2,21.75,10.9,0.06,0.06,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATTCGAAAGAATAA",6,2.81,NA,NA,NA,NA,NA,NA,"stop","T3E T55L D68* D97R",4
"lib2","SARS-CoV-2","TTATTCGAAAGTAGAT",8,0.61,NA,NA,NA,NA,NA,NA,"stop","N64Y T85M N92F I104*",4
"lib2","SARS-CoV-2","TTATTCGATCCTCCAA",8,81.4,10.54,-0.3,0.06,2.84,1.08,0,"1 nonsynonymous","D90H",1
"lib2","SARS-CoV-2","TTATTCGATTGACCTG",4,18.35,8.95,-1.89,0.46,1.5,1,0.08,">1 nonsynonymous","E10C A42R F47W L60Y Q144V P149L V173L",7
"lib2","SARS-CoV-2","TTATTCGGAAAGGCGC",9,153.12,6.04,-4.8,0.66,1.5,1.18,0.01,">1 nonsynonymous","R124T T148I",2
"lib2","SARS-CoV-2","TTATTCGTAAATATTA",1,15.82,6,-4.84,2,1.5,1.36,0.06,">1 nonsynonymous","R16F S41P F99D G116E",4
"lib2","SARS-CoV-2","TTATTCGTATAAACCA",2,84.52,10.26,-0.58,0.05,2.9,1.05,0,">1 nonsynonymous","F47V Q168S H189Y K199S",4
"lib2","SARS-CoV-2","TTATTCGTATTGGCAC",6,36.58,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D59M D98I W106S R127L",4
"lib2","SARS-CoV-2","TTATTCGTGACAGGGC",9,9.42,NA,NA,NA,NA,NA,NA,"stop","N120* A192E",2
"lib2","SARS-CoV-2","TTATTCTAACAATGGT",10,43.99,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","V37K C49S G101V",3
"lib2","SARS-CoV-2","TTATTCTATAACAGCA",7,56.79,8.18,-2.66,0.4,1.5,1,0.06,">1 nonsynonymous","G9P L57Y W106L",3
"lib2","SARS-CoV-2","TTATTCTCAAATATTT",1,3.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34R F62R V77R N107S S129R Q168V",6
"lib2","SARS-CoV-2","TTATTCTGATGTAGAA",1,26.6,10.39,-0.45,0.07,2.89,1.07,0,">1 nonsynonymous","I2G A22K K87S",3
"lib2","SARS-CoV-2","TTATTCTTATGTAGAA",7,131.26,7.96,-2.87,0.19,1.5,1.09,0.01,">1 nonsynonymous","Y21E N58L",2
"lib2","SARS-CoV-2","TTATTCTTGGATAACC",1,12.34,10.91,0.08,0.11,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATTGAACATGAGAA",3,6.48,7.01,-3.83,0.55,2.19,1.08,0.02,">1 nonsynonymous","S19N L60S R124E Y175A",4
"lib2","SARS-CoV-2","TTATTGACCATCGCAG",4,149.11,9.83,-1.01,0.07,2.14,1.04,0,">1 nonsynonymous","E10T P133T",2
"lib2","SARS-CoV-2","TTATTGACTCCTGGCA",13,78.54,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","R25F R78G F99S F156L",4
"lib2","SARS-CoV-2","TTATTGAGATGAATCG",5,91.66,9.46,-1.37,0.07,2.93,1.05,0,"1 nonsynonymous","E154F",1
"lib2","SARS-CoV-2","TTATTGAGCAAAATTC",4,0.88,NA,NA,NA,NA,NA,NA,"stop","S19G T100* G152Q",3
"lib2","SARS-CoV-2","TTATTGAGCATATGGT",5,66.49,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40T G86V P96H G117P",4
"lib2","SARS-CoV-2","TTATTGATACGAACAC",2,30.8,10.74,-0.09,0.07,2.94,1.07,0,"1 nonsynonymous","L111F",1
"lib2","SARS-CoV-2","TTATTGATAGTGTAAA",3,0.33,NA,NA,NA,NA,NA,NA,"stop","L5V I28Y V52* L95H T140W T170S",6
"lib2","SARS-CoV-2","TTATTGATCTAACTAA",2,23.05,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","L95N I104F Y123S",3
"lib2","SARS-CoV-2","TTATTGATCTTGAATC",1,2.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9R P82L",2
"lib2","SARS-CoV-2","TTATTGCATAAATTTT",7,91.99,10.43,-0.4,0.06,2.91,1.1,0,">1 nonsynonymous","G9L V32I S41M D59G",4
"lib2","SARS-CoV-2","TTATTGCATAGAAGTA",10,44.16,6.08,-4.76,0.91,1.5,1.19,0.01,">1 nonsynonymous","I88Y P197R",2
"lib2","SARS-CoV-2","TTATTGCCACCTGGTC",3,35.24,6.9,-3.93,0.15,1.5,1.15,0.01,">1 nonsynonymous","D98S G146V P191W",3
"lib2","SARS-CoV-2","TTATTGCCCAAATTCT",1,2.69,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R78F",1
"lib2","SARS-CoV-2","TTATTGCGCTATATGA",9,79.53,6,-4.84,2,3,1.18,0,">1 nonsynonymous","D98L Y121S N130E D137H P161Y",5
"lib2","SARS-CoV-2","TTATTGCTTATAAAAA",1,4.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L V37S A42R Q84R A105D I138S V180M",7
"lib2","SARS-CoV-2","TTATTGGATGACTTTA",7,1.15,NA,NA,NA,NA,NA,NA,"stop","K87I D98* I104D",3
"lib2","SARS-CoV-2","TTATTGGGAATTACAT",4,59.63,9.18,-1.66,0.11,1.76,1.11,0,">1 nonsynonymous","Y35P V65K",2
"lib2","SARS-CoV-2","TTATTGTAAACATTCC",5,0.83,NA,NA,NA,NA,NA,NA,"stop","C6L P96M T100F I138*",4
"lib2","SARS-CoV-2","TTATTGTAAATCCTAG",4,6.34,10.49,-0.35,0.21,2.88,1,0.01,">1 nonsynonymous","T63L V65I T85D",3
"lib2","SARS-CoV-2","TTATTGTACCTTACCC",21,258.44,10.86,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATTGTCCATCATAA",3,67.56,10.28,-0.56,0.06,2.76,1.09,0,">1 nonsynonymous","A18S Y21S V37F K56E G196T",5
"lib2","SARS-CoV-2","TTATTGTGATAATGCA",2,80.32,10.13,-0.7,0.04,2.64,1.05,0,"1 nonsynonymous","N92S",1
"lib2","SARS-CoV-2","TTATTGTGGAACGTAT",8,44.57,10.77,-0.07,0.06,2.93,1.03,0,"1 nonsynonymous","S184G",1
"lib2","SARS-CoV-2","TTATTGTGGTAGAACT",1,47.53,10.77,-0.07,0.08,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATTGTTACCGGCAG",3,37.43,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","Y39R N64D P96T F134A G155I",5
"lib2","SARS-CoV-2","TTATTGTTCAATCTTA",1,43.52,10.77,-0.06,0.06,2.91,1.1,0,">1 nonsynonymous","G9E A42Y K128P",3
"lib2","SARS-CoV-2","TTATTGTTTAACAAAG",1,55.4,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","I142T V180K",2
"lib2","SARS-CoV-2","TTATTTAAACAGATAG",2,59.86,10.77,-0.07,0.06,2.82,1.12,0,"1 nonsynonymous","G155Q",1
"lib2","SARS-CoV-2","TTATTTAACAGATATG",7,72.15,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","I104P S139H N157V V194G",4
"lib2","SARS-CoV-2","TTATTTAAGCTAATTC",2,45.63,8.67,-2.16,0.08,1.74,1.03,0.01,"1 nonsynonymous","G86C",1
"lib2","SARS-CoV-2","TTATTTACACCCAGAA",1,27.57,6,-4.84,1.51,1.5,1.18,0.04,">1 nonsynonymous","G86C Y119M F126Y",3
"lib2","SARS-CoV-2","TTATTTACATATTACA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","K56* T100M R127N N157F",4
"lib2","SARS-CoV-2","TTATTTACGCCCCATT",3,21.29,10.48,-0.36,0.04,2.86,1.16,0,">1 nonsynonymous","K56S Y123R",2
"lib2","SARS-CoV-2","TTATTTACTGCAAATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K56L D112S N120I G146T L187S",5
"lib2","SARS-CoV-2","TTATTTAGGGCGGTTC",4,74.7,9.54,-1.29,0.11,2.25,1.04,0,">1 nonsynonymous","Y35E F44R D90N Q168S",4
"lib2","SARS-CoV-2","TTATTTATAAAAAGGT",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y D137L N151K",3
"lib2","SARS-CoV-2","TTATTTATAGAACACG",8,2.22,NA,NA,NA,NA,NA,NA,"stop","D68T K87S V115* N120Y",4
"lib2","SARS-CoV-2","TTATTTCAAACTGTTA",3,176.18,10.76,-0.08,0.02,2.96,1.04,0,"1 nonsynonymous","G9Q",1
"lib2","SARS-CoV-2","TTATTTCACGTAAAAA",2,96.99,9.21,-1.63,0.06,2.66,1.04,0,">1 nonsynonymous","G83Y I138N G155N V173H",4
"lib2","SARS-CoV-2","TTATTTCAGGATAAAA",4,33.83,10.73,-0.11,0.07,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTATTTCCCAATGGTT",12,48.75,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","C49N D112L G146F",3
"lib2","SARS-CoV-2","TTATTTCCGCTGATCA",9,216.19,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","D90G Q144L N157F Q176G",4
"lib2","SARS-CoV-2","TTATTTCCTTCAATAC",10,2.97,NA,NA,NA,NA,NA,NA,"stop","T46N G86* G146E",3
"lib2","SARS-CoV-2","TTATTTCGTTAGTTTA",1,0.07,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","TTATTTCTAAAAGCGC",4,11.9,6,-4.84,2,1.5,1.09,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","TTATTTCTAACTCATC",13,72.46,9.18,-1.65,0.09,1.72,1.08,0,">1 nonsynonymous","N1C P133L P197Y",3
"lib2","SARS-CoV-2","TTATTTCTGTATAAAT",6,19.29,6,-4.84,2,3,1.08,0,">1 nonsynonymous","F70R G86R D98T P169A",4
"lib2","SARS-CoV-2","TTATTTCTTGCAACGG",8,37.5,10.73,-0.1,0.04,2.87,1.15,0,">1 nonsynonymous","K56S N151A",2
"lib2","SARS-CoV-2","TTATTTGATTAGAAAC",1,0,NA,NA,NA,NA,NA,NA,"stop","N4L A18R S129T P149* L183T",5
"lib2","SARS-CoV-2","TTATTTGATTCCAAAC",1,17.03,9.11,-1.72,0.17,1.54,1.09,0.02,">1 nonsynonymous","F8I A14C G51H K114L",4
"lib2","SARS-CoV-2","TTATTTGGCATGAAGG",8,124.57,10.74,-0.09,0.04,2.83,1.17,0,">1 nonsynonymous","T55N T201M",2
"lib2","SARS-CoV-2","TTATTTGTATGCTGCT",4,139.13,10.1,-0.73,0.05,2.84,1.06,0,">1 nonsynonymous","N110S N120L Q144T",3
"lib2","SARS-CoV-2","TTATTTGTCGAAAGCT",5,2.26,NA,NA,NA,NA,NA,NA,"stop","D97* R136H Q168S E186S",4
"lib2","SARS-CoV-2","TTATTTTACAACCGTG",7,94.39,6,-4.84,2,3,1.16,0,">1 nonsynonymous","S45P N58Q A89Y C158T",4
"lib2","SARS-CoV-2","TTATTTTACGTGAGTA",2,4.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Q84R",1
"lib2","SARS-CoV-2","TTATTTTAGTTACAAT",6,42.42,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10G A22G A89L T201R",4
"lib2","SARS-CoV-2","TTATTTTATTCTGACC",9,107.66,6.2,-4.64,0.52,1.5,1.15,0.01,">1 nonsynonymous","Y91H N120L I142A",3
"lib2","SARS-CoV-2","TTATTTTCAGTCCGCG",5,34.22,6,-4.84,2,3,1.21,0,">1 nonsynonymous","P96M W106Q",2
"lib2","SARS-CoV-2","TTATTTTCTATAAGTT",3,55.82,10.31,-0.53,0.08,2.73,1.02,0,">1 nonsynonymous","L5V Y50H",2
"lib2","SARS-CoV-2","TTATTTTGACTAAATG",5,119.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2K Y39N T63E V77F",4
"lib2","SARS-CoV-2","TTATTTTTAAGCAGGG",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V W106S Q144Y P169V",4
"lib2","SARS-CoV-2","TTATTTTTTTCCTTAA",6,85,9.63,-1.21,0.1,1.95,1.04,0,">1 nonsynonymous","F62G T85M P149Y",3
"lib2","SARS-CoV-2","TTCAAAAAAAAAAGCA",5,70.81,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","L95S N107S V115I R136Y P149E",5
"lib2","SARS-CoV-2","TTCAAAAAACAAACCT",6,208.82,10.68,-0.15,0.02,2.98,1.03,0,">1 nonsynonymous","D59S D75S D97V",3
"lib2","SARS-CoV-2","TTCAAAAAACATAACT",18,120.34,8.99,-1.85,0.07,2.85,1.12,0,">1 nonsynonymous","Y121L Q144T T170S",3
"lib2","SARS-CoV-2","TTCAAAAAACCTGACA",11,3.18,NA,NA,NA,NA,NA,NA,"stop","Y91*",1
"lib2","SARS-CoV-2","TTCAAAAAAGAACCCG",3,65.2,7.49,-3.35,0.14,1.68,1.11,0.01,">1 nonsynonymous","L60A K87N L122T Y143A",4
"lib2","SARS-CoV-2","TTCAAAAAAGAAGCAA",4,50.73,10.15,-0.69,0.03,3,1.03,0,">1 nonsynonymous","K114L G174K",2
"lib2","SARS-CoV-2","TTCAAAAAATAACACA",1,18.1,10.63,-0.21,0.08,2.91,1.09,0,">1 nonsynonymous","Y39E K87H P149H",3
"lib2","SARS-CoV-2","TTCAAAAAATTTTTTT",1,74.36,10.86,0.02,0.05,2.95,1.06,0,"1 nonsynonymous","F62T",1
"lib2","SARS-CoV-2","TTCAAAAACAAATATT",3,25.94,6.92,-3.92,0.54,1.5,1.07,0.08,">1 nonsynonymous","A18G L57H N130C C158W",4
"lib2","SARS-CoV-2","TTCAAAAAGCCCCAAA",2,45.32,10.14,-0.69,0.07,2.83,1.04,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","TTCAAAAAGCCGACCA",2,29.62,10.88,0.04,0.07,2.9,1.12,0,">1 nonsynonymous","T15E L122K",2
"lib2","SARS-CoV-2","TTCAAAAGATGAATAG",10,208.39,10.87,0.03,0.04,2.95,1.06,0,">1 nonsynonymous","A18S V37L",2
"lib2","SARS-CoV-2","TTCAAAAGCAATAAAC",4,15.52,7.16,-3.67,0.53,1.5,1.1,0.05,">1 nonsynonymous","K94A S108G Y123S K128S",4
"lib2","SARS-CoV-2","TTCAAAAGCTTCGGGC",3,41.5,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N58R A89L",2
"lib2","SARS-CoV-2","TTCAAAAGGTACGATG",18,191.22,10.5,-0.34,0.03,2.88,1.09,0,"1 nonsynonymous","S45Y",1
"lib2","SARS-CoV-2","TTCAAAAGTCGCAAAG",4,46.59,10.82,-0.01,0.05,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAAAATAACTAATA",10,27.68,10.81,-0.02,0.08,2.9,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCAAAATACTCAAAC",2,30.38,10.12,-0.72,0.09,2.82,1.04,0,">1 nonsynonymous","K56Q A105V S147Q",3
"lib2","SARS-CoV-2","TTCAAAATATCACAGT",6,23.57,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","D90N V103H",2
"lib2","SARS-CoV-2","TTCAAAATATGTTAAA",4,59.36,7.88,-2.95,0.17,2,1.12,0.01,">1 nonsynonymous","P133S N171R",2
"lib2","SARS-CoV-2","TTCAAAATATTATTCG",5,67.96,9.21,-1.62,0.07,1.66,1.12,0,">1 nonsynonymous","S29Y N64M F70M",3
"lib2","SARS-CoV-2","TTCAAAATCACAAGAC",9,119.83,9.71,-1.13,0.04,2.97,1.04,0,">1 nonsynonymous","L38M D98E L125S",3
"lib2","SARS-CoV-2","TTCAAAATGATGCTGA",5,65.59,10.71,-0.13,0.05,2.96,1.06,0,"1 nonsynonymous","G152H",1
"lib2","SARS-CoV-2","TTCAAAATGCTTAAAC",5,100.59,8.49,-2.34,0.09,2.41,1.1,0,">1 nonsynonymous","F47L T55H C61A G117R",4
"lib2","SARS-CoV-2","TTCAAAATTGGATTCA",4,22.03,6.19,-4.65,0.54,2.44,1.24,0.01,">1 nonsynonymous","L38Q A105V P149R",3
"lib2","SARS-CoV-2","TTCAAACAACAAATCT",1,11.9,10.77,-0.06,0.11,2.94,1.07,0.01,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","TTCAAACAACAGCGGC",3,47.34,9.04,-1.79,0.04,2.89,1.05,0,">1 nonsynonymous","G166L K199N",2
"lib2","SARS-CoV-2","TTCAAACAATAAACAA",3,5.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","K48F W106K",2
"lib2","SARS-CoV-2","TTCAAACACGCGTTAA",2,59.47,10.86,0.03,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAAACACTCATATG",10,94.25,7.96,-2.87,0.37,1.5,1.01,0.05,">1 nonsynonymous","Y39K N107K S147V G152C S200Q",5
"lib2","SARS-CoV-2","TTCAAACATTTACAAG",2,27.85,7.28,-3.55,0.31,1.79,1.06,0.03,">1 nonsynonymous","K48Q Y159R",2
"lib2","SARS-CoV-2","TTCAAACATTTAGTCA",2,66.39,10.79,-0.05,0.03,3,1.01,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TTCAAACCGACATTAC",1,0.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3S V20W T46D",3
"lib2","SARS-CoV-2","TTCAAACCGGCACATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T63*",1
"lib2","SARS-CoV-2","TTCAAACGCAAAATCC",2,39.5,10.84,0,0.07,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAAACGGAGAGGAA",3,34.29,7.6,-3.24,0.22,1.72,1.09,0.02,">1 nonsynonymous","A14Y Y119W P149S",3
"lib2","SARS-CoV-2","TTCAAACTAACACTGA",2,0.93,NA,NA,NA,NA,NA,NA,"stop","P54C I138* F167L",3
"lib2","SARS-CoV-2","TTCAAACTAGCACCCG",4,33.28,9.98,-0.85,0.1,2.7,1.02,0.01,">1 nonsynonymous","S41T T63R I138R P149T",4
"lib2","SARS-CoV-2","TTCAAACTATGGACGT",7,1.69,NA,NA,NA,NA,NA,NA,"stop","G116L Y143* T201V",3
"lib2","SARS-CoV-2","TTCAAAGAACAGTCGC",17,78.94,10.7,-0.14,0.05,2.9,1.07,0,">1 nonsynonymous","T3A G9Y R78V P197S",4
"lib2","SARS-CoV-2","TTCAAAGACAATTAAA",6,42.73,9.25,-1.59,0.11,1.96,1.07,0.01,">1 nonsynonymous","L5A A89M S129G",3
"lib2","SARS-CoV-2","TTCAAAGACATCACTT",1,0.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S Y50V Y119L Y159L",4
"lib2","SARS-CoV-2","TTCAAAGAGAGAACAA",1,31.18,10.82,-0.01,0.07,3,1.01,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","TTCAAAGCCATTGGTT",1,1.2,NA,NA,NA,NA,NA,NA,"stop","T55* S147Y G174I",3
"lib2","SARS-CoV-2","TTCAAAGGAACGTACA",8,224.55,8.49,-2.35,0.11,2.8,1.07,0,">1 nonsynonymous","N4I T55F Y175N T201S",4
"lib2","SARS-CoV-2","TTCAAAGGCCCAAATT",3,22.62,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V71S I88C",2
"lib2","SARS-CoV-2","TTCAAAGGCCTTGCGC",12,131.85,10.64,-0.19,0.02,2.93,1.07,0,">1 nonsynonymous","D90E P191S",2
"lib2","SARS-CoV-2","TTCAAAGTAAACTATT",5,43.22,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T85N C102R N130C",3
"lib2","SARS-CoV-2","TTCAAAGTAATCGTGA",1,15.34,6.19,-4.65,0.84,1.5,1.06,0.02,">1 nonsynonymous","K94T G101R T170R",3
"lib2","SARS-CoV-2","TTCAAAGTGAAAGGAG",3,0.34,NA,NA,NA,NA,NA,NA,"stop","L5E A18S E186*",3
"lib2","SARS-CoV-2","TTCAAATAAAGGCTAC",1,6.35,6.24,-4.6,2,3,1.14,0.01,"1 nonsynonymous","L95R",1
"lib2","SARS-CoV-2","TTCAAATAACGTTAAT",1,10.29,11.03,0.2,0.07,3,1.01,0,"1 nonsynonymous","C61Q",1
"lib2","SARS-CoV-2","TTCAAATAAGCCATCA",3,22.83,9.02,-1.82,0.11,2.17,1.08,0.01,">1 nonsynonymous","C6R V32S Y66V K87L N120V",5
"lib2","SARS-CoV-2","TTCAAATAAGTCGAAT",7,4.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L183P T201M",2
"lib2","SARS-CoV-2","TTCAAATACAGACCGC",7,144.39,10.07,-0.77,0.07,2.28,1.06,0,">1 nonsynonymous","T55N W106S",2
"lib2","SARS-CoV-2","TTCAAATACCAATCAG",3,0,NA,NA,NA,NA,NA,NA,"stop","D90Q G116C Q168V T201*",4
"lib2","SARS-CoV-2","TTCAAATAGGGTACGG",1,36.94,9.69,-1.14,0.11,2.18,1.05,0.01,">1 nonsynonymous","G9T W106R I142L",3
"lib2","SARS-CoV-2","TTCAAATCACTGATAG",6,37.31,10.37,-0.47,0.05,2.87,1.16,0,"1 nonsynonymous","E154D",1
"lib2","SARS-CoV-2","TTCAAATCATTGTGGG",10,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5S T55I Y143P P191H",4
"lib2","SARS-CoV-2","TTCAAATCCATTTATA",3,20.85,10.72,-0.12,0.05,2.97,1.02,0,">1 nonsynonymous","I2H I142L",2
"lib2","SARS-CoV-2","TTCAAATCCTAGAATA",6,90.24,8.12,-2.72,0.12,1.91,1.08,0.01,"1 nonsynonymous","Y121D",1
"lib2","SARS-CoV-2","TTCAAATCCTGAGATG",12,149.37,10.71,-0.13,0.02,2.95,1.06,0,">1 nonsynonymous","C61P Y66T",2
"lib2","SARS-CoV-2","TTCAAATGGGAAAAAA",4,0.4,NA,NA,NA,NA,NA,NA,"stop","S19L N110H D137S Y143* G174Y",5
"lib2","SARS-CoV-2","TTCAAATGTAGAAAAA",1,5.82,9.74,-1.09,0.23,2.93,1,0.01,">1 nonsynonymous","N1K G117D",2
"lib2","SARS-CoV-2","TTCAAATTCTGATATA",2,18.97,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27L A33E C49S T55F L60V",5
"lib2","SARS-CoV-2","TTCAACAAAATAAAAT",9,40.21,7.43,-3.41,0.33,1.5,1.14,0.04,">1 nonsynonymous","F44G I104T N120C I142Y",4
"lib2","SARS-CoV-2","TTCAACAAACACAACC",11,66.43,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4Q S19R S69C D97N N120S",5
"lib2","SARS-CoV-2","TTCAACAAATAAAGAC",4,35.29,10.73,-0.1,0.06,2.9,1.1,0,"1 nonsynonymous","T148F",1
"lib2","SARS-CoV-2","TTCAACAAATGATTTA",3,172.23,8.93,-1.91,0.05,2.43,1.09,0,">1 nonsynonymous","N13Y R73S",2
"lib2","SARS-CoV-2","TTCAACAAATTAGTCA",18,31.36,6,-4.84,1.28,1.5,1.19,0.01,">1 nonsynonymous","A33D L131Y",2
"lib2","SARS-CoV-2","TTCAACAAGGAGACAA",18,82.92,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","F99I C150S",2
"lib2","SARS-CoV-2","TTCAACAATGCTAAGT",5,23.41,6,-4.84,2,2.66,1.25,0.02,">1 nonsynonymous","A33N D90G L122S Y178I L183D",5
"lib2","SARS-CoV-2","TTCAACACCCTTAATG",3,39.86,7.15,-3.69,0.13,1.56,1.1,0,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","TTCAACACGAGTAAAT",6,29.69,9.75,-1.08,0.14,1.96,1,0.01,">1 nonsynonymous","I80L E186I",2
"lib2","SARS-CoV-2","TTCAACACTCGGCGGA",2,23.5,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A42V D68N D137L T170P G174F",5
"lib2","SARS-CoV-2","TTCAACACTGAGTGTA",3,40.55,10.97,0.13,0.06,2.96,1.02,0,"1 nonsynonymous","N64H",1
"lib2","SARS-CoV-2","TTCAACAGTGCTATAA",2,56.67,10.88,0.05,0.08,2.89,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCAACATACTCAGGT",5,56.31,10.76,-0.08,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAACATTAGCCTTT",6,194.99,9.56,-1.28,0.04,2.93,1.06,0,">1 nonsynonymous","F8L F126C",2
"lib2","SARS-CoV-2","TTCAACATTTAAAACT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7S N30R Q84N",3
"lib2","SARS-CoV-2","TTCAACCACGAATATA",6,74.7,8.77,-2.06,0.1,2.51,1.08,0,">1 nonsynonymous","C31F Y39T F44N T140L",4
"lib2","SARS-CoV-2","TTCAACCATAACCCAC",2,19.37,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","Y50T W106D T140G",3
"lib2","SARS-CoV-2","TTCAACCATAGGAAAT",1,26.09,8.06,-2.77,0.22,1.5,1.06,0.03,">1 nonsynonymous","N24P S69M N110S",3
"lib2","SARS-CoV-2","TTCAACCCAGTTGCGT",1,43.34,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D112N S139Y T148A",3
"lib2","SARS-CoV-2","TTCAACCCCTAAACCT",10,4.13,NA,NA,NA,NA,NA,NA,"stop","S29M K198*",2
"lib2","SARS-CoV-2","TTCAACCGGGAATTTG",3,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13I A42C I88R P96S",4
"lib2","SARS-CoV-2","TTCAACCGTGTCTAGG",8,74.21,10.07,-0.77,0.07,2.8,1.06,0,">1 nonsynonymous","L60R A81S I138N",3
"lib2","SARS-CoV-2","TTCAACCTACGACGAA",6,93.37,8.44,-2.39,0.08,2.27,1.06,0,">1 nonsynonymous","K87H Y165L",2
"lib2","SARS-CoV-2","TTCAACCTCTATTAAC",6,52.2,9.88,-0.96,0.11,2.53,1.04,0.01,"1 nonsynonymous","A81L",1
"lib2","SARS-CoV-2","TTCAACGACAATCTCT",6,112.35,9.16,-1.67,0.07,2.8,1.08,0,">1 nonsynonymous","A42E G83S E154Y T201N",4
"lib2","SARS-CoV-2","TTCAACGACTCAGGGT",5,1.98,NA,NA,NA,NA,NA,NA,"stop","L5T D59L K87V N92R L122V R179*",6
"lib2","SARS-CoV-2","TTCAACGATAAAAATT",2,53.08,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","R124H P161S",2
"lib2","SARS-CoV-2","TTCAACGCAGCATATC",1,0.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15L F44V Y121A G146Y Y165E",5
"lib2","SARS-CoV-2","TTCAACGGAAGCAAGC",2,3.13,NA,NA,NA,NA,NA,NA,"stop","A22C V77M T85I E135* E186Y T201A",6
"lib2","SARS-CoV-2","TTCAACGGCTTACAAT",6,90.83,10.11,-0.73,0.09,2.47,1.03,0,">1 nonsynonymous","C61H W106R",2
"lib2","SARS-CoV-2","TTCAACGTATCGGATG",7,61.28,10.8,-0.04,0.04,2.95,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCAACGTCTTTTTGA",5,19.58,6.39,-4.45,0.57,1.5,1.17,0.02,">1 nonsynonymous","N107H I142V P149C",3
"lib2","SARS-CoV-2","TTCAACGTGCGAGACT",7,7.85,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S41C F70V K87R",3
"lib2","SARS-CoV-2","TTCAACTACACGGTAC",2,21.6,7.16,-3.67,0.43,1.5,1.15,0.05,">1 nonsynonymous","A18S A81D P96A",3
"lib2","SARS-CoV-2","TTCAACTACACTCTGC",5,122.12,10.83,-0.01,0.03,2.95,1.06,0,">1 nonsynonymous","K56T N64H",2
"lib2","SARS-CoV-2","TTCAACTACCGTTACG",16,129.24,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A14G S29W S41A P96K",4
"lib2","SARS-CoV-2","TTCAACTATAAGCTTA",5,23.22,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","W106G S139F",2
"lib2","SARS-CoV-2","TTCAACTATACAATCA",6,176.99,9.12,-1.71,0.07,2.67,1.08,0,">1 nonsynonymous","Y91S F156L",2
"lib2","SARS-CoV-2","TTCAACTATCCTACCA",13,95.87,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","L5Q S53R F99P Y119Q",4
"lib2","SARS-CoV-2","TTCAACTGTCAAGAAG",12,126.39,10.7,-0.14,0.03,2.93,1.07,0,">1 nonsynonymous","T3L Y39S",2
"lib2","SARS-CoV-2","TTCAACTTTAGTAATT",7,38.27,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6M F44Y N107I L122V K128N S147A",6
"lib2","SARS-CoV-2","TTCAAGAAAGTCCTAA",9,94.73,9.79,-1.05,0.06,2.19,1.02,0,">1 nonsynonymous","V37C D59T R136T",3
"lib2","SARS-CoV-2","TTCAAGAAGAATGTGA",1,7.3,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","E10G S43T K87D G101N R136V G152S",6
"lib2","SARS-CoV-2","TTCAAGAGACAAAGAA",4,39.64,9.28,-1.56,0.08,2.86,1.1,0,">1 nonsynonymous","A42T E154F",2
"lib2","SARS-CoV-2","TTCAAGAGACACTCGC",2,59.13,10.12,-0.72,0.1,2.65,1,0,">1 nonsynonymous","A42T S69A D98S",3
"lib2","SARS-CoV-2","TTCAAGATATATGACT",4,14.57,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1M S43T P82R W106L K114L",5
"lib2","SARS-CoV-2","TTCAAGATCAAAATTT",22,132.21,7.72,-3.12,0.26,1.5,1.03,0.03,">1 nonsynonymous","E10I S41D V52K D59H T85V",5
"lib2","SARS-CoV-2","TTCAAGATTCGTCTAA",3,13.75,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","G9P V20K N40T K48S I88F",5
"lib2","SARS-CoV-2","TTCAAGCAATACCCTA",1,29.55,10.1,-0.74,0.06,2.81,1.01,0,">1 nonsynonymous","S43R P96D T140L",3
"lib2","SARS-CoV-2","TTCAAGCAGGTACTTA",2,53.69,10.67,-0.16,0.06,2.88,1.12,0,">1 nonsynonymous","V173L E186Y",2
"lib2","SARS-CoV-2","TTCAAGCCAAGCACTA",6,32.43,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V11T F17T G155C P161M",4
"lib2","SARS-CoV-2","TTCAAGCGAAGACTCT",2,52.41,9.58,-1.25,0.09,2.35,1.04,0,">1 nonsynonymous","A81W G155L",2
"lib2","SARS-CoV-2","TTCAAGCGACTTAATG",1,17.62,7.91,-2.93,0.2,1.65,1.12,0.02,">1 nonsynonymous","C6R Y93S T100I F160R P177L H189V",6
"lib2","SARS-CoV-2","TTCAAGGAAAATGGAA",1,1.94,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15F G51S Y91A F99N T140C",5
"lib2","SARS-CoV-2","TTCAAGGAACAATCTA",7,0.26,NA,NA,NA,NA,NA,NA,"stop","N4* L95V W106S",3
"lib2","SARS-CoV-2","TTCAAGGAACAGGAAT",10,93.59,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F17S S41R N58M D90Y D112R F156S",6
"lib2","SARS-CoV-2","TTCAAGGATCATACTT",5,35.37,10.65,-0.19,0.03,2.96,1.07,0,">1 nonsynonymous","V37T G83C",2
"lib2","SARS-CoV-2","TTCAAGGCCCCATGTT",17,190.21,10.7,-0.13,0.03,2.92,1.08,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","TTCAAGGTCCATAAAA",9,200.54,10.66,-0.18,0.03,2.95,1.06,0,">1 nonsynonymous","F12I T201L",2
"lib2","SARS-CoV-2","TTCAAGGTTTGATATG",3,32.24,7.72,-3.12,0.13,1.64,1.02,0,"1 nonsynonymous","C150G",1
"lib2","SARS-CoV-2","TTCAAGTAAATAGAAC",1,2.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61W P96S Y143L",3
"lib2","SARS-CoV-2","TTCAAGTACTATTACA",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y121G",1
"lib2","SARS-CoV-2","TTCAAGTATTCCCAAT",8,72.87,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","I138H R179G",2
"lib2","SARS-CoV-2","TTCAAGTCCTAGCCGA",1,15.73,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","Y93A R124S",2
"lib2","SARS-CoV-2","TTCAAGTCTGATCAAT",5,70.97,10.46,-0.38,0.08,2.7,1.19,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAATAAATTACCAA",13,59.17,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","T3P D137L L188W",3
"lib2","SARS-CoV-2","TTCAATAACCCACCCA",3,76.82,10.77,-0.06,0.05,2.9,1.06,0,"1 nonsynonymous","N130F",1
"lib2","SARS-CoV-2","TTCAATAACTCAAACG",7,61.75,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2L A22Q D34L A105M K114W A145L",6
"lib2","SARS-CoV-2","TTCAATAATACAACAG",26,357.55,10.9,0.06,0.05,2.9,1.09,0,">1 nonsynonymous","P7D D90R",2
"lib2","SARS-CoV-2","TTCAATAATCCATTCA",3,11.91,10.22,-0.62,0.15,2.47,1.14,0.01,">1 nonsynonymous","T100A G155R",2
"lib2","SARS-CoV-2","TTCAATAATCCCAATA",10,187.61,10.78,-0.06,0.04,2.88,1.1,0,"1 nonsynonymous","A22S",1
"lib2","SARS-CoV-2","TTCAATACAAGTAAAA",5,5.07,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","TTCAATACGAGAAAGA",7,15.93,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","V20P F99L D112L",3
"lib2","SARS-CoV-2","TTCAATAGCAACTTGG",10,2.15,NA,NA,NA,NA,NA,NA,"stop","F70L P82S A89V Y91* F134L Y159E",6
"lib2","SARS-CoV-2","TTCAATAGCTTTCAGT",10,57.77,6,-4.84,0.89,1.5,1.17,0.01,">1 nonsynonymous","S53G C61S L131H G155F",4
"lib2","SARS-CoV-2","TTCAATAGGACCCAAC",13,1.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N107H G166R",2
"lib2","SARS-CoV-2","TTCAATATAAACCCCG",2,72.94,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y35A D98H Y119F R179K",4
"lib2","SARS-CoV-2","TTCAATATCCCCCCGA",7,4.01,NA,NA,NA,NA,NA,NA,"stop","F47* A105N L122T S129K",4
"lib2","SARS-CoV-2","TTCAATATGAAAAATT",14,5.23,NA,NA,NA,NA,NA,NA,"stop","I28T Q84* P96R N118D Q144P P149S",6
"lib2","SARS-CoV-2","TTCAATATTACCGACA",3,0.09,NA,NA,NA,NA,NA,NA,"stop","T15A K87* G146* Q168P",4
"lib2","SARS-CoV-2","TTCAATCATTAGGAAA",12,117.16,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","V37M D112S E135S T148F",4
"lib2","SARS-CoV-2","TTCAATCCACCTGGGA",5,25.45,6,-4.84,1.87,1.5,1.13,0.01,">1 nonsynonymous","A81G A89G F134Q R179F",4
"lib2","SARS-CoV-2","TTCAATCCCTCAACCA",18,2,NA,NA,NA,NA,NA,NA,"stop","Y123A G166*",2
"lib2","SARS-CoV-2","TTCAATCGATCAATAC",1,24.36,6,-4.84,2,3,1.28,0.01,">1 nonsynonymous","Y35E V103G Y119I",3
"lib2","SARS-CoV-2","TTCAATCTACACGCAA",8,46.05,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","F70Y A81C Y123G D137I",4
"lib2","SARS-CoV-2","TTCAATCTTCCACAAG",1,6.38,6,-4.84,2,3,1.08,0,">1 nonsynonymous","A33S V71L V77W W106T L122R",5
"lib2","SARS-CoV-2","TTCAATGAAACCCATA",2,19.76,9.4,-1.44,0.07,2.36,1.03,0,">1 nonsynonymous","G9D A42S A89C V103T V153N G174Q P197R",7
"lib2","SARS-CoV-2","TTCAATGAATAGTCGC",7,35.04,6.3,-4.54,0.61,1.5,1.16,0.03,">1 nonsynonymous","N4H S19L L57Y V71K Q163N",5
"lib2","SARS-CoV-2","TTCAATGCACCGTAAA",2,1.32,NA,NA,NA,NA,NA,NA,"stop","K56L Y91L T201*",3
"lib2","SARS-CoV-2","TTCAATGCATAAACTT",19,134.3,6,-4.84,1.05,1.5,1.19,0.01,">1 nonsynonymous","A89M N120P",2
"lib2","SARS-CoV-2","TTCAATGTCGTATGTC",2,28.66,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C6D S45K A81H Y91N L188S",5
"lib2","SARS-CoV-2","TTCAATTAATAATCAA",5,7.45,6,-4.84,2,1.5,1.04,0.01,">1 nonsynonymous","T15N L38R I72Q",3
"lib2","SARS-CoV-2","TTCAATTACGCCATAT",5,106.89,8.65,-2.18,0.08,1.58,1.04,0,"1 nonsynonymous","Y178D",1
"lib2","SARS-CoV-2","TTCAATTATATAAACG",10,8.69,6,-4.84,1.41,1.5,1.18,0.07,">1 nonsynonymous","N4T N13K C61V D90L P96F V153G F160L",7
"lib2","SARS-CoV-2","TTCAATTCAAAAGAAC",2,0.27,NA,NA,NA,NA,NA,NA,"stop","G166*",1
"lib2","SARS-CoV-2","TTCAATTCATCGACTT",2,0.69,NA,NA,NA,NA,NA,NA,"stop","Y165* H189S",2
"lib2","SARS-CoV-2","TTCAATTGAGTTAAGA",1,21.65,9.77,-1.06,0.2,2.23,1.03,0.03,">1 nonsynonymous","Y21W R27Q K114Y P149S",4
"lib2","SARS-CoV-2","TTCAATTTATCAATCA",2,68.07,10.05,-0.78,0.06,2.86,1.03,0,">1 nonsynonymous","S45K K114D",2
"lib2","SARS-CoV-2","TTCAATTTCGATAGAT",8,5.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P P96C W106G",3
"lib2","SARS-CoV-2","TTCAATTTCTGCAGGA",1,19.25,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","N64V A81E F99K L122F G146L V153T",6
"lib2","SARS-CoV-2","TTCAATTTTCCGAAGA",1,16.14,10.25,-0.59,0.14,2.75,1.13,0.01,">1 nonsynonymous","N4T C102I",2
"lib2","SARS-CoV-2","TTCACAAAAAGACTTT",2,1.27,NA,NA,NA,NA,NA,NA,"stop","T3Q R78G A81G I138* P149V G152D",6
"lib2","SARS-CoV-2","TTCACAAAACGTAAAC",3,93.71,10.95,0.11,0.05,2.94,1.07,0,"1 nonsynonymous","T85S",1
"lib2","SARS-CoV-2","TTCACAAACAAAAAGC",2,63.84,10.26,-0.58,0.06,2.88,1.12,0,">1 nonsynonymous","S45Q K87S",2
"lib2","SARS-CoV-2","TTCACAAACGTGAGCG",3,19.94,NA,NA,NA,NA,NA,0.22,"1 nonsynonymous","C49R",1
"lib2","SARS-CoV-2","TTCACAAAGGCTACTA",4,0.4,NA,NA,NA,NA,NA,NA,"stop","S113R Y121*",2
"lib2","SARS-CoV-2","TTCACAAATCAAATTA",3,1.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42F D97W V103M R127N L183N",5
"lib2","SARS-CoV-2","TTCACAACTCTTCAGC",4,65.76,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","R25T Y35V T46P N64I D90M F99N L122N C150D",8
"lib2","SARS-CoV-2","TTCACAAGGAAAATAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95Q S129F R136F",3
"lib2","SARS-CoV-2","TTCACAATAAACGAGA",3,43.42,10.63,-0.21,0.05,2.94,1.02,0,">1 nonsynonymous","Y66F F99W P133A",3
"lib2","SARS-CoV-2","TTCACAATAACCCTCG",9,16.6,NA,NA,NA,NA,NA,NA,"stop","N13T T63N F134* E141R",4
"lib2","SARS-CoV-2","TTCACAATGTTGAACT",1,18.07,7.09,-3.75,0.58,1.62,1.13,0.03,">1 nonsynonymous","F12R K87D",2
"lib2","SARS-CoV-2","TTCACACAAACCCCAG",3,5.75,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","T55Y D98V G116R Y123G",4
"lib2","SARS-CoV-2","TTCACACAACCTTCAT",4,33.94,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82E K87M F99N N107Y",4
"lib2","SARS-CoV-2","TTCACACACACTCGTA",10,92.13,9.39,-1.45,0.1,1.73,1.14,0,">1 nonsynonymous","F12V D34T S184I",3
"lib2","SARS-CoV-2","TTCACACACACTTTGT",11,151.95,10.61,-0.23,0.04,2.94,1.07,0,">1 nonsynonymous","I2N T15L",2
"lib2","SARS-CoV-2","TTCACACCAACCACTA",4,38.58,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","W106A G116V Y175D",3
"lib2","SARS-CoV-2","TTCACACCAATTGTCT",9,104.8,10.42,-0.42,0.04,2.9,1.03,0,">1 nonsynonymous","S41G T55G I80V",3
"lib2","SARS-CoV-2","TTCACACCCGCCAATA",17,78.14,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","C6A K48W W106I K128V",4
"lib2","SARS-CoV-2","TTCACACGAGACCAGG",3,19.99,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","T3K S36N S41K Y50S G117W S129L F156W",7
"lib2","SARS-CoV-2","TTCACACGCTTTTAGA",4,66.58,6.61,-4.23,0.51,1.5,1.17,0.03,">1 nonsynonymous","W23G Y91H K114Q H189D",4
"lib2","SARS-CoV-2","TTCACACGGGCAATCA",4,54.56,9.86,-0.98,0.1,2.15,1.05,0,">1 nonsynonymous","A14Y P149T",2
"lib2","SARS-CoV-2","TTCACACTAAACTAAG",9,134.08,10.79,-0.05,0.03,2.97,1.05,0,"1 nonsynonymous","F8Y",1
"lib2","SARS-CoV-2","TTCACACTACATAATA",1,90.95,10.93,0.1,0.06,2.93,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCACACTCTAAATAA",2,20.87,10.83,-0.01,0.04,3,1.01,0,"1 nonsynonymous","T148S",1
"lib2","SARS-CoV-2","TTCACACTGGACTCAC",7,82.61,10.77,-0.07,0.09,2.79,1.16,0,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","TTCACAGAAACGTCTT",13,57.4,9.15,-1.69,0.16,1.53,1.13,0.01,"1 nonsynonymous","L183T",1
"lib2","SARS-CoV-2","TTCACAGATCCTGGAG",5,103.75,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V32C G86W Y159G",3
"lib2","SARS-CoV-2","TTCACAGGAATATAAA",6,0.72,NA,NA,NA,NA,NA,NA,"stop","S36V T85* D98Y P197T",4
"lib2","SARS-CoV-2","TTCACAGTAAGGGTCT",3,43.43,10.22,-0.62,0.08,2.63,1.05,0,"1 nonsynonymous","D34F",1
"lib2","SARS-CoV-2","TTCACAGTACGTGTCG",8,54.45,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3S I72L T140S C150M",4
"lib2","SARS-CoV-2","TTCACAGTTTTACAAC",1,18.26,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G51C P82A P149G F160V",4
"lib2","SARS-CoV-2","TTCACATACATTAAGA",4,112.04,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","G155T P177I",2
"lib2","SARS-CoV-2","TTCACATACTACATTA",3,22.7,10.14,-0.69,0.11,2.45,1.09,0.01,"1 nonsynonymous","P133M",1
"lib2","SARS-CoV-2","TTCACATATATAAGTT",5,32,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C6D P82R G86S",3
"lib2","SARS-CoV-2","TTCACATCTCCTCGGA",10,3.42,NA,NA,NA,NA,NA,NA,"stop","K48* A105H S200P",3
"lib2","SARS-CoV-2","TTCACATGGTAACCGG",8,3.24,NA,NA,NA,NA,NA,NA,"stop","N1* N64C A89E D97F S113R K128Y",6
"lib2","SARS-CoV-2","TTCACATTCGATAGCT",2,5.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86S Q144G S184M",3
"lib2","SARS-CoV-2","TTCACCAAGTACGTGC",2,0,NA,NA,NA,NA,NA,NA,"stop","D97* A105E T201G",3
"lib2","SARS-CoV-2","TTCACCAAGTCCCACA",8,23.52,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","N13L A105V N151C",3
"lib2","SARS-CoV-2","TTCACCAATAGGTATT",5,116.82,10.76,-0.08,0.04,2.92,1.08,0,"1 nonsynonymous","I2L",1
"lib2","SARS-CoV-2","TTCACCAATCAAAGTT",3,8.93,6.16,-4.68,0.76,1.62,1.11,0.01,">1 nonsynonymous","G9W T15G N40I W106L D112H",5
"lib2","SARS-CoV-2","TTCACCAATTTATATG",4,115.98,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","G86V G152Q K198G",3
"lib2","SARS-CoV-2","TTCACCACAAACTCGC",2,50.18,6,-4.84,2,3,1.14,0,">1 nonsynonymous","K56V G74L K114L Y121R",4
"lib2","SARS-CoV-2","TTCACCACTGTGTACA",1,28.18,10.67,-0.17,0.06,2.94,1.06,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","TTCACCAGTTAGCGCT",4,79.53,10.22,-0.62,0.06,2.8,1.05,0,"1 nonsynonymous","W106M",1
"lib2","SARS-CoV-2","TTCACCATAAAGAACA",6,49.91,10.86,0.02,0.06,2.97,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCACCATCAAGACCT",5,63.91,10.57,-0.27,0.05,2.9,1.12,0,">1 nonsynonymous","N40S T55N R78G E141S",4
"lib2","SARS-CoV-2","TTCACCATTTTCTATG",5,41.26,10.12,-0.71,0.08,2.72,1.02,0,">1 nonsynonymous","K26I F44T P149V",3
"lib2","SARS-CoV-2","TTCACCCAGTACGGTA",4,0,NA,NA,NA,NA,NA,NA,"stop","C31* A105L",2
"lib2","SARS-CoV-2","TTCACCCCAATTGAGT",6,83.15,10.88,0.04,0.05,2.91,1.08,0,"1 nonsynonymous","A192S",1
"lib2","SARS-CoV-2","TTCACCCCGCTTAATG",4,72.79,10.97,0.13,0.07,2.92,1.09,0,">1 nonsynonymous","V37D T201Y",2
"lib2","SARS-CoV-2","TTCACCCCGGCCTCAG",11,62.9,9.43,-1.4,0.1,1.71,1.02,0,"1 nonsynonymous","W23R",1
"lib2","SARS-CoV-2","TTCACCCCGTTAGACG",6,168.25,8.6,-2.23,0.08,1.82,1.07,0,">1 nonsynonymous","K48N Y165L",2
"lib2","SARS-CoV-2","TTCACCCCTACTAGGT",5,2.69,NA,NA,NA,NA,NA,NA,"stop","S36* D90S",2
"lib2","SARS-CoV-2","TTCACCCCTCTACCAT",6,57.96,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R25M L95W N120K",3
"lib2","SARS-CoV-2","TTCACCCTATAAACAT",3,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","TTCACCCTTCGACCAT",6,0.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","D59M",1
"lib2","SARS-CoV-2","TTCACCGACTTGATGT",1,20.29,10.82,-0.02,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCACCTAACATTTGG",3,29.55,10.49,-0.34,0.04,2.92,1.06,0,">1 nonsynonymous","A22L L125I",2
"lib2","SARS-CoV-2","TTCACCTACTGTCGCG",7,0,NA,NA,NA,NA,NA,NA,"stop","N13F S41* T201S",3
"lib2","SARS-CoV-2","TTCACCTATAGTCGTA",3,28.83,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L131R G146L",2
"lib2","SARS-CoV-2","TTCACCTATTGGTGAA",3,1.81,NA,NA,NA,NA,NA,NA,"stop","T15R Q163*",2
"lib2","SARS-CoV-2","TTCACCTGACCAATAT",5,214.48,9.87,-0.97,0.04,2.55,1.05,0,">1 nonsynonymous","D90L D97C L122S",3
"lib2","SARS-CoV-2","TTCACCTTAAAATTAA",3,31.2,7.59,-3.25,0.19,1.73,1.09,0.01,">1 nonsynonymous","Y35R D59R G146E",3
"lib2","SARS-CoV-2","TTCACCTTCTCAACCT",5,65.17,9.58,-1.25,0.04,2.28,1.03,0,">1 nonsynonymous","V52L Y91Q",2
"lib2","SARS-CoV-2","TTCACCTTGTAAACAG",9,87.78,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","W23K T55V R73Y F134V",4
"lib2","SARS-CoV-2","TTCACGAAACCACCTT",8,103.3,8.69,-2.15,0.15,1.5,1.13,0.01,">1 nonsynonymous","T63L P133H F160L",3
"lib2","SARS-CoV-2","TTCACGAACGAACAAG",12,46.03,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","A18K G51R G86M D97G N130S",5
"lib2","SARS-CoV-2","TTCACGACCGCAGCCT",7,64.48,10.82,-0.02,0.06,3,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCACGACGTTGGCCG",2,0.85,NA,NA,NA,NA,NA,NA,"stop","D97I Y123N K128* T170R",4
"lib2","SARS-CoV-2","TTCACGACTATAAGAG",11,164.06,10.64,-0.2,0.02,2.9,1.07,0,">1 nonsynonymous","E10M T100Y",2
"lib2","SARS-CoV-2","TTCACGCAAAAGAGGT",10,0.81,NA,NA,NA,NA,NA,NA,"stop","S53F G101* G152D",3
"lib2","SARS-CoV-2","TTCACGCATACTCCCA",2,17.77,10.63,-0.21,0.05,2.98,1.03,0,"1 nonsynonymous","F44H",1
"lib2","SARS-CoV-2","TTCACGCCCAGATTAT",3,67.51,8.21,-2.63,0.14,2.5,1.13,0.01,">1 nonsynonymous","I142F N171R",2
"lib2","SARS-CoV-2","TTCACGCCTATTGCCT",5,17.7,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","N4Y V11N F99R",3
"lib2","SARS-CoV-2","TTCACGCGAAAATGAA",2,64.97,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N4F C158H",2
"lib2","SARS-CoV-2","TTCACGCGAGTTATAT",1,4.44,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTCACGGCAATTTTCG",1,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15H T201L",2
"lib2","SARS-CoV-2","TTCACGGGGCCAATTG",2,0.27,NA,NA,NA,NA,NA,NA,"stop","A33Q N92A K128* I138K",4
"lib2","SARS-CoV-2","TTCACGGTAACAGAGG",4,54.76,8.94,-1.9,0.07,2,1.04,0,">1 nonsynonymous","N4G I28R K56E K87L",4
"lib2","SARS-CoV-2","TTCACGTAAATTAGAC",2,0.37,NA,NA,NA,NA,NA,NA,"stop","G9* Y165I",2
"lib2","SARS-CoV-2","TTCACGTCACTTAATA",2,14.27,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","E76V A105L R124V N130F I138V",5
"lib2","SARS-CoV-2","TTCACGTCCCGTCCGT",2,0.35,NA,NA,NA,NA,NA,NA,"stop","N13M G74* D90L R136S T170S",5
"lib2","SARS-CoV-2","TTCACGTCTGACCACG",19,313.57,10.84,0,0.05,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCACGTGAACTAAAA",6,54.77,8.25,-2.59,0.16,2.41,1.07,0.01,">1 nonsynonymous","E10N Y39Q K56L Y119F E154L",5
"lib2","SARS-CoV-2","TTCACGTTAGGATGTA",14,147.91,10.86,0.02,0.07,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCACTAAATTGCATT",6,57.7,9.6,-1.24,0.08,1.76,1.07,0,">1 nonsynonymous","S41T N58R Q84W T148A",4
"lib2","SARS-CoV-2","TTCACTAAATTGTGTA",3,50.13,6.39,-4.44,0.22,1.5,1.08,0,">1 nonsynonymous","F8T N64V A105S T140L T170R",5
"lib2","SARS-CoV-2","TTCACTAAGGCCAAAA",5,58.64,6,-4.84,2,1.5,1.18,0,">1 nonsynonymous","N58L R124P",2
"lib2","SARS-CoV-2","TTCACTAAGTACAAAA",1,23.29,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","G9Y S43C Y165E",3
"lib2","SARS-CoV-2","TTCACTAATTGAAAAC",4,51.88,6.1,-4.73,0.92,1.5,1.24,0.03,">1 nonsynonymous","E76K N120T",2
"lib2","SARS-CoV-2","TTCACTACCGTGATAA",1,22.56,10.64,-0.19,0.08,2.88,1.12,0,">1 nonsynonymous","V11I V37T D59F",3
"lib2","SARS-CoV-2","TTCACTAGGGGTATAT",1,0.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L122N Y143H",2
"lib2","SARS-CoV-2","TTCACTATAAATAATT",3,55.64,6,-4.84,2,1.5,1.07,0.01,"1 nonsynonymous","G172F",1
"lib2","SARS-CoV-2","TTCACTATAAATACAA",11,257.63,10.25,-0.59,0.02,2.83,1.06,0,">1 nonsynonymous","D98S Q144V",2
"lib2","SARS-CoV-2","TTCACTATGTTTTAGG",5,157.56,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","D59S G86I N92L V173K E186D",5
"lib2","SARS-CoV-2","TTCACTCGCCCCAGAT",3,5.89,NA,NA,NA,NA,NA,NA,"stop","T3C S19* S53Y L125S N151K F156R C195Y",7
"lib2","SARS-CoV-2","TTCACTCGTTTGAGTG",10,69.57,6.04,-4.8,0.99,1.5,1.14,0.02,">1 nonsynonymous","N1Y G101F F134Y",3
"lib2","SARS-CoV-2","TTCACTCTAACAACGA",7,34,6,-4.84,2,1.5,1.12,0.01,"1 nonsynonymous","I88D",1
"lib2","SARS-CoV-2","TTCACTCTTACTTCAG",3,42.19,10.56,-0.28,0.06,2.9,1.05,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","TTCACTCTTTTCAGTG",2,55.38,10.68,-0.16,0.07,2.86,1.14,0,"1 nonsynonymous","G146A",1
"lib2","SARS-CoV-2","TTCACTGGGCTTACTG",4,45.59,6,-4.84,2,1.5,1.16,0.02,"1 nonsynonymous","D112K",1
"lib2","SARS-CoV-2","TTCACTTATAAAAACT",1,0.02,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K26E",1
"lib2","SARS-CoV-2","TTCACTTATGTAAGGC",1,42.73,10.74,-0.09,0.04,2.93,1.07,0,"1 nonsynonymous","A18N",1
"lib2","SARS-CoV-2","TTCACTTCCGACTCAT",1,29.61,6,-4.84,2,1.5,1.19,0.07,">1 nonsynonymous","Y35S F62G R73K I88P K94H T201S",6
"lib2","SARS-CoV-2","TTCACTTCTAAGAACT",1,0.34,NA,NA,NA,NA,NA,NA,"stop","V32* N58K P169M",3
"lib2","SARS-CoV-2","TTCACTTGACAGCATT",10,316.32,10.17,-0.67,0.03,2.83,1.05,0,"1 nonsynonymous","F44C",1
"lib2","SARS-CoV-2","TTCACTTTAAGGAGAC",1,33.24,10.49,-0.34,0.06,3,1,0,"1 nonsynonymous","A81V",1
"lib2","SARS-CoV-2","TTCACTTTACCTGAAG",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27L S41N A105K",3
"lib2","SARS-CoV-2","TTCACTTTAGCGAAAC",2,12.39,10.83,-0.01,0.1,2.84,1.16,0,"1 nonsynonymous","T3I",1
"lib2","SARS-CoV-2","TTCACTTTCATAGTTG",4,6.28,9.88,-0.95,0.13,2.56,1,0.01,">1 nonsynonymous","T100I W106Y F160A E186G",4
"lib2","SARS-CoV-2","TTCACTTTGCCCAAAG",1,4.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12R Y35K S43V G174M T201H",5
"lib2","SARS-CoV-2","TTCACTTTGGCGGATA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50C Y178C",2
"lib2","SARS-CoV-2","TTCACTTTGTGAAACA",1,3.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G117E V181A",2
"lib2","SARS-CoV-2","TTCAGAAAGTAGGGCA",5,43.39,9.86,-0.98,0.09,2.08,1.06,0,">1 nonsynonymous","N4K N58I G83W",3
"lib2","SARS-CoV-2","TTCAGAAATCGAATGG",6,41.55,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D68T R124W S139T",3
"lib2","SARS-CoV-2","TTCAGAATATCCAAGG",5,226.94,9.34,-1.49,0.05,2.74,1.08,0,"1 nonsynonymous","Q176A",1
"lib2","SARS-CoV-2","TTCAGAATATTTTCAA",4,53.61,10.85,0.01,0.06,2.91,1.09,0,"1 nonsynonymous","T148Y",1
"lib2","SARS-CoV-2","TTCAGAATTCAATAAT",21,64.31,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","C49R S139P",2
"lib2","SARS-CoV-2","TTCAGACACATCTAAA",3,0.24,NA,NA,NA,NA,NA,NA,"stop","N4* F70S G101L Y119L",4
"lib2","SARS-CoV-2","TTCAGACACTCGCTGC",6,209.78,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","N4Q S36F F156C F167K",4
"lib2","SARS-CoV-2","TTCAGAGACAGCCGTA",14,84.47,6.32,-4.52,0.46,1.5,1.16,0.01,">1 nonsynonymous","F8S C49L D98R N130R",4
"lib2","SARS-CoV-2","TTCAGAGCAAACAAAA",7,5.31,NA,NA,NA,NA,NA,NA,"stop","L5R Y35L C49N K56* L95G",5
"lib2","SARS-CoV-2","TTCAGAGGATTATATC",5,99.91,8.49,-2.34,0.14,2.93,1.03,0.01,">1 nonsynonymous","R73S Y119W T148V",3
"lib2","SARS-CoV-2","TTCAGAGTAACATTAT",2,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100G",1
"lib2","SARS-CoV-2","TTCAGAGTATTTACTA",1,16.38,9.74,-1.1,0.12,2.69,1.1,0.01,">1 nonsynonymous","Y121S V153T",2
"lib2","SARS-CoV-2","TTCAGATACTGATCAG",3,36.35,10.72,-0.12,0.07,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAGATAGGGCACGT",1,0,NA,NA,NA,NA,NA,NA,"stop","C6M C49*",2
"lib2","SARS-CoV-2","TTCAGATATGTCCGGA",2,7.48,6,-4.84,2,1.5,1.07,0.03,">1 nonsynonymous","A42L G74C T85N Y143S Q168P",5
"lib2","SARS-CoV-2","TTCAGATATTCTAATT",4,19.12,6.88,-3.95,0.37,1.5,1.19,0.03,">1 nonsynonymous","N4R A18S S45A N118S P133R",5
"lib2","SARS-CoV-2","TTCAGATTCAGGGACT",1,0.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y93F N107P",2
"lib2","SARS-CoV-2","TTCAGCAATAGGTAGG",6,3.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103E F134Y V180P",3
"lib2","SARS-CoV-2","TTCAGCACGTAAACGA",6,49.78,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","Y93G Y121E",2
"lib2","SARS-CoV-2","TTCAGCACTTTATGGA",1,19.3,10.83,-0.01,0.07,2.92,1.11,0,"1 nonsynonymous","V77L",1
"lib2","SARS-CoV-2","TTCAGCCATAATTAGC",1,0,NA,NA,NA,NA,NA,NA,"stop","A14C V20L I28*",3
"lib2","SARS-CoV-2","TTCAGCCCAGAGTCCC",8,387.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P K56T Y119S P133R",4
"lib2","SARS-CoV-2","TTCAGCCCTCGATATG",3,43.01,10.84,0.01,0.13,2.79,1.11,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TTCAGCCTAAATAACC",1,6.73,8.65,-2.18,0.2,1.9,1.07,0.02,"1 nonsynonymous","Y91D",1
"lib2","SARS-CoV-2","TTCAGCGAAGATGAAT",7,54.03,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","R25M F47E K198P",3
"lib2","SARS-CoV-2","TTCAGCGATGGGCCCA",8,31.18,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","G86P Y121T",2
"lib2","SARS-CoV-2","TTCAGCGCGACGATAA",4,154.54,10.43,-0.41,0.03,2.92,1.04,0,">1 nonsynonymous","S41M I138H",2
"lib2","SARS-CoV-2","TTCAGCGCGATGGCCC",1,8.31,8.56,-2.27,0.56,1.74,1.06,0.02,">1 nonsynonymous","E10I P96N T148L G152N",4
"lib2","SARS-CoV-2","TTCAGCGGTTCCCTGT",17,26.12,9.02,-1.82,0.38,1.5,1,0.07,">1 nonsynonymous","N1K T15M D34V D90E Y123F F185G G196L",7
"lib2","SARS-CoV-2","TTCAGCTCAAAGATAG",1,7.84,6,-4.84,2,1.5,1,0,">1 nonsynonymous","N40D F44A L183A",3
"lib2","SARS-CoV-2","TTCAGCTCATAGGGCG",14,111.1,10.32,-0.52,0.06,2.23,1.05,0,">1 nonsynonymous","E135L P149N Q163V",3
"lib2","SARS-CoV-2","TTCAGCTCATCGCCCT",32,147.48,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","D68I Y91V K132L",3
"lib2","SARS-CoV-2","TTCAGCTTAGTGTGAA",2,15.12,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","D97V Q176P S184G",3
"lib2","SARS-CoV-2","TTCAGGAACGTGTTGC",2,4.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","R124H",1
"lib2","SARS-CoV-2","TTCAGGACCAATCTAC",9,23.46,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","V182R",1
"lib2","SARS-CoV-2","TTCAGGAGTATCTGTA",5,32.87,6.1,-4.74,0.59,2.35,1.2,0.01,"1 nonsynonymous","D68I",1
"lib2","SARS-CoV-2","TTCAGGATCGAACCAT",5,27.41,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","E10P I88L G166R Y178L",4
"lib2","SARS-CoV-2","TTCAGGATTAATAACA",5,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L G101H A105P I138L",4
"lib2","SARS-CoV-2","TTCAGGCGAGTTACCT",9,147.74,10.82,-0.02,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCAGGCTAATACACG",11,285.61,9.62,-1.22,0.04,1.96,1.05,0,">1 nonsynonymous","D59S Y66N P96K",3
"lib2","SARS-CoV-2","TTCAGGGGAAGTTAGC",4,40.59,9.88,-0.95,0.1,2.14,1.04,0.01,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","TTCAGGTATAATGAAG",14,102.64,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G51T N107S Q144Y V173F",4
"lib2","SARS-CoV-2","TTCAGGTGATACCTAT",4,58.1,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V32Y T63E V77K N92I S113A",5
"lib2","SARS-CoV-2","TTCAGGTTATCATCTA",2,1.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G74K T100P N118K",3
"lib2","SARS-CoV-2","TTCAGTAAACTTATCT",1,0,NA,NA,NA,NA,NA,NA,"stop","Q84V N92V F99* C150* F167I",5
"lib2","SARS-CoV-2","TTCAGTAAAGTATGAT",17,252.07,10.66,-0.17,0.02,2.96,1.05,0,">1 nonsynonymous","V115Y N151L S184T",3
"lib2","SARS-CoV-2","TTCAGTAACCGTCGAT",3,62.53,10.51,-0.33,0.04,2.99,1,0,">1 nonsynonymous","I142L G174N",2
"lib2","SARS-CoV-2","TTCAGTAACGTCATTG",10,43.78,6.24,-4.6,0.51,1.5,1.06,0.01,">1 nonsynonymous","P82L Y91V D97S A105N E154N",5
"lib2","SARS-CoV-2","TTCAGTAACTACAAGG",1,9.83,7.84,-3,0.28,1.5,1.02,0.04,">1 nonsynonymous","C6N S19K V37E",3
"lib2","SARS-CoV-2","TTCAGTACACGATTCC",1,105.65,10.87,0.03,0.06,2.84,1.17,0,"1 nonsynonymous","V173I",1
"lib2","SARS-CoV-2","TTCAGTACAGAGGCAT",1,0.95,NA,NA,NA,NA,NA,NA,"stop","L5G S45A D98N T140*",4
"lib2","SARS-CoV-2","TTCAGTACTAATACCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144M L183K S200L",3
"lib2","SARS-CoV-2","TTCAGTAGCGCCCGAG",3,0,NA,NA,NA,NA,NA,NA,"stop","F8C C31F F62L G117W L122* N157H",6
"lib2","SARS-CoV-2","TTCAGTATCACAGCCC",7,78.72,6.25,-4.58,0.4,1.5,1.15,0.01,">1 nonsynonymous","L5N C31Q W106I G155H",4
"lib2","SARS-CoV-2","TTCAGTATGTTCAGGT",2,11.15,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","F44P C61P G83I D97T",4
"lib2","SARS-CoV-2","TTCAGTCAATTGAATG",5,19.11,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","G9M A14V T46G C102Q T148A",5
"lib2","SARS-CoV-2","TTCAGTCAGACGATGC",2,0,NA,NA,NA,NA,NA,NA,"stop","T3Y V77K G116I T148I Y178L T201*",6
"lib2","SARS-CoV-2","TTCAGTCGGGCAACAA",7,0.53,NA,NA,NA,NA,NA,NA,"stop","R16* D98V",2
"lib2","SARS-CoV-2","TTCAGTGCACCGAATA",3,101.03,10.19,-0.65,0.06,2.71,1.06,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","TTCAGTGCTCACATAA",10,49.96,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","K94F W106L Y121Q",3
"lib2","SARS-CoV-2","TTCAGTGGATCTGTAG",11,136.18,8.12,-2.72,0.09,1.8,1.06,0,">1 nonsynonymous","G9H K56A G83L G117K I138Y",5
"lib2","SARS-CoV-2","TTCAGTTGACTTGCTT",3,34.74,9.74,-1.1,0.1,2.43,1.17,0,">1 nonsynonymous","C31L T100I F160T",3
"lib2","SARS-CoV-2","TTCAGTTTGCCATCAC",2,8.94,10.66,-0.17,0.06,3,1.01,0,">1 nonsynonymous","A105S S129R N151E",3
"lib2","SARS-CoV-2","TTCAGTTTGCCTCAGC",1,69.5,10.58,-0.26,0.09,2.85,1.01,0,">1 nonsynonymous","C61N P149L E154A",3
"lib2","SARS-CoV-2","TTCAGTTTTTCGCTTA",5,77.96,7.4,-3.44,0.13,1.72,1.12,0,">1 nonsynonymous","N40T Y143G K199L",3
"lib2","SARS-CoV-2","TTCATAAAATAATAGG",1,75.69,10.82,-0.01,0.04,2.91,1.09,0,"1 nonsynonymous","V173F",1
"lib2","SARS-CoV-2","TTCATAAACACAAGAC",3,5.74,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","T15A I104D",2
"lib2","SARS-CoV-2","TTCATAAAGCAGCATA",3,6.11,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","A81F R124P N151I",3
"lib2","SARS-CoV-2","TTCATAACACTTAACT",5,58.22,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","T3V V37L A89P A105S Y119N S139C Y175I",7
"lib2","SARS-CoV-2","TTCATAACGATGTTCC",15,113.27,8.86,-1.97,0.1,1.8,1.04,0,">1 nonsynonymous","L5K S19N Y66D D90K",4
"lib2","SARS-CoV-2","TTCATAAGAGCGCAAT",18,3.96,NA,NA,NA,NA,NA,NA,"stop","N13E D137Q G152I K198*",4
"lib2","SARS-CoV-2","TTCATAAGATGATAAT",1,49.88,10.89,0.06,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATAAGCGGTCTGT",7,1.57,NA,NA,NA,NA,NA,NA,"stop","A14T R25G Y35N A105* L111V",5
"lib2","SARS-CoV-2","TTCATAAGTGGTAAAG",1,19.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L5W D59H A89S Y143S G155L F167S",6
"lib2","SARS-CoV-2","TTCATAATAAAGTGGA",9,1.62,NA,NA,NA,NA,NA,NA,"stop","T55V P96* T148P L162A",4
"lib2","SARS-CoV-2","TTCATAATATCAAATT",1,24.28,10.75,-0.09,0.05,2.95,1.05,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TTCATAATTTCTCACA",4,59.58,8.9,-1.94,0.08,2.53,1.13,0,">1 nonsynonymous","N118L P149R",2
"lib2","SARS-CoV-2","TTCATACATGGGGACG",4,46.64,10.21,-0.63,0.05,2.85,1.11,0,">1 nonsynonymous","C61N E135K",2
"lib2","SARS-CoV-2","TTCATACCAGCTAGAT",3,19.12,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L38K C61A V103P",3
"lib2","SARS-CoV-2","TTCATACGAAATGATA",14,146.36,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6S S45C S139N F167V P177S",5
"lib2","SARS-CoV-2","TTCATACGAACAACCA",1,4.97,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y123T",1
"lib2","SARS-CoV-2","TTCATACGGACCAATC",14,156.45,10.64,-0.2,0.02,2.96,1.05,0,">1 nonsynonymous","G116L K128H",2
"lib2","SARS-CoV-2","TTCATACGTATTTTAC",2,66.06,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","G116L N151S T170S P177T",4
"lib2","SARS-CoV-2","TTCATACTGCCGATAG",2,6.42,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A42V D90H W106L F167Y",4
"lib2","SARS-CoV-2","TTCATACTTGAAATAC",1,0,NA,NA,NA,NA,NA,NA,"stop","R25S D98S S113* G152D S200T",5
"lib2","SARS-CoV-2","TTCATAGAGTTAAAAA",2,91.02,10.24,-0.59,0.02,2.94,1.06,0,">1 nonsynonymous","T55R D90S F156I",3
"lib2","SARS-CoV-2","TTCATAGATACTGACA",3,4.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15R G83I F99S W106Y Y165H L188I",6
"lib2","SARS-CoV-2","TTCATAGATTGGTATA",6,31.24,6,-4.84,2,3,1.12,0,">1 nonsynonymous","G9R S45N T140M C158T",4
"lib2","SARS-CoV-2","TTCATAGCAAGGAGAC",3,57.96,10.08,-0.76,0.03,2.95,1.05,0,">1 nonsynonymous","P149F G166A",2
"lib2","SARS-CoV-2","TTCATAGCGGTAAAAT",1,15,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L38N Y50G",2
"lib2","SARS-CoV-2","TTCATAGGTATCAATA",4,24.53,10.98,0.15,0.07,2.96,1.05,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TTCATAGGTCATTGAA",3,30.53,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","D34P C49G T55G D68T",4
"lib2","SARS-CoV-2","TTCATAGTAGAATTGT",2,38.85,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25T S69R G117M G146L",4
"lib2","SARS-CoV-2","TTCATATAACGTACCA",2,26.9,10.71,-0.12,0.08,2.94,1,0,">1 nonsynonymous","E141Y Q163H",2
"lib2","SARS-CoV-2","TTCATATACCAACAAA",11,50.21,6,-4.84,1.38,2.15,1.3,0.02,">1 nonsynonymous","A89Y V103L S129R",3
"lib2","SARS-CoV-2","TTCATATACGTAATGT",1,4.26,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","TTCATATACTTCACTA",2,1.04,NA,NA,NA,NA,NA,NA,"stop","N30* G74Q G86N S139H P161W",5
"lib2","SARS-CoV-2","TTCATATCGAGAGCCT",3,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96F S147R",2
"lib2","SARS-CoV-2","TTCATATCTAAATCAT",7,106.68,8.41,-2.43,0.12,3,1.04,0.01,">1 nonsynonymous","V37G K87S G166L",3
"lib2","SARS-CoV-2","TTCATATGGGTTCTGA",7,75.23,6,-4.84,1.75,1.5,1.12,0,">1 nonsynonymous","W106L G172S",2
"lib2","SARS-CoV-2","TTCATATTATGAATTT",2,94.48,8.67,-2.16,0.09,2.98,1.09,0,"1 nonsynonymous","F126A",1
"lib2","SARS-CoV-2","TTCATATTCAGCAAAC",1,7.65,7.09,-3.75,0.69,1.5,1,0.05,">1 nonsynonymous","L60T A81S C102V",3
"lib2","SARS-CoV-2","TTCATATTGAAAACTT",2,48.85,10.42,-0.41,0.06,2.86,1.02,0,">1 nonsynonymous","E10S N58S V65A",3
"lib2","SARS-CoV-2","TTCATATTTGTACACG",5,98.39,10.77,-0.06,0.05,2.94,1.08,0,"1 nonsynonymous","Y123H",1
"lib2","SARS-CoV-2","TTCATCAAAACTGAAA",10,158.87,10.64,-0.2,0.04,2.91,1.07,0,"1 nonsynonymous","A33T",1
"lib2","SARS-CoV-2","TTCATCAAAATTGTGA",4,41,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","E10N K48N Y50C Y123L Q176K",5
"lib2","SARS-CoV-2","TTCATCAACGTTCTGG",6,89.77,8.22,-2.62,0.11,2.39,1.1,0,">1 nonsynonymous","D90Y A145C F156R",3
"lib2","SARS-CoV-2","TTCATCACATATGGAA",8,45.62,9.69,-1.15,0.13,2.01,1.08,0.01,"1 nonsynonymous","C49M",1
"lib2","SARS-CoV-2","TTCATCCAATCGAAAC",5,107.31,10.79,-0.04,0.04,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATCCGCATATATT",3,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M S29E C102A N107K Y178P",5
"lib2","SARS-CoV-2","TTCATCCGCCGTAGTG",25,10.01,9.21,-1.63,0.22,2.49,1.26,0.03,"wildtype","",0
"lib2","SARS-CoV-2","TTCATCGACTAATAAC",11,158.49,10.86,0.03,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATCGCAAGGAGTA",7,14.31,6.5,-4.33,0.43,1.5,1.09,0.01,">1 nonsynonymous","N13F I72G",2
"lib2","SARS-CoV-2","TTCATCGCAATACTTT",3,3.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38R G83E K128L V173F",4
"lib2","SARS-CoV-2","TTCATCGCGGCGCAGC",7,20.02,6.52,-4.31,0.38,1.5,1.02,0.03,">1 nonsynonymous","R16F A89Y L95S W106P S139M",5
"lib2","SARS-CoV-2","TTCATCGCTAAAGTGA",6,9.02,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","L57Q Y93T",2
"lib2","SARS-CoV-2","TTCATCTAAGAAGACC",2,22.37,10.73,-0.1,0.04,2.82,1.18,0,"1 nonsynonymous","S45Q",1
"lib2","SARS-CoV-2","TTCATCTAATGGAAAG",1,19.2,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","Y93V N110K P149S C158Q",4
"lib2","SARS-CoV-2","TTCATCTACAAACAAA",5,13.24,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13T C49W S164F",3
"lib2","SARS-CoV-2","TTCATCTAGAATGGCC",5,37.38,6.14,-4.7,0.81,1.5,1.14,0.03,">1 nonsynonymous","L60A R127F",2
"lib2","SARS-CoV-2","TTCATCTATTGCAACT",2,50.27,9.67,-1.16,0.06,2.73,1.04,0,">1 nonsynonymous","V52L A89S P169V",3
"lib2","SARS-CoV-2","TTCATCTGAATGACAT",9,195.92,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A105S P177I K199T",3
"lib2","SARS-CoV-2","TTCATCTGTTAACGTT",5,19.85,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","L57I I104R V182C",3
"lib2","SARS-CoV-2","TTCATGAAAGCATAGA",2,9.49,6,-4.84,2,1.5,1.09,0.04,">1 nonsynonymous","F99S K128N G146M F160Y S184K G196L",6
"lib2","SARS-CoV-2","TTCATGAACGGACACA",5,52.64,10.73,-0.1,0.06,2.78,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATGAAGTAGGATC",4,77.65,10.91,0.07,0.07,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATGAATAACAATA",9,286.92,10.83,-0.01,0.05,2.87,1.14,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCATGACACATTGGT",1,9.53,10.71,-0.13,0.06,3,1,0,"1 nonsynonymous","I2V",1
"lib2","SARS-CoV-2","TTCATGACTAGCCCAG",8,66.2,10.82,-0.02,0.03,2.97,1.04,0,">1 nonsynonymous","K56L T201A",2
"lib2","SARS-CoV-2","TTCATGAGTCGGTGGT",6,113.8,10.76,-0.08,0.04,2.9,1.06,0,">1 nonsynonymous","T55Q N64E G146S",3
"lib2","SARS-CoV-2","TTCATGATAATAAAAC",15,119.2,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y93L G117D Q144L",3
"lib2","SARS-CoV-2","TTCATGATATTGATGG",5,121.03,9.19,-1.65,0.05,2.83,1.1,0,">1 nonsynonymous","N13S Y119K",2
"lib2","SARS-CoV-2","TTCATGCAAAAAACTA",5,81.75,6,-4.84,2,3,1.17,0,">1 nonsynonymous","L38P R73T A105C I142Y",4
"lib2","SARS-CoV-2","TTCATGCCAACTTAGT",1,10.3,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","A33L K94E L122R",3
"lib2","SARS-CoV-2","TTCATGCGCCCAACAA",2,0.88,NA,NA,NA,NA,NA,NA,"stop","N30M T100L L125N Q144I Q168Y T201*",6
"lib2","SARS-CoV-2","TTCATGCGCTAGAGAC",6,2.82,NA,NA,NA,NA,NA,NA,"stop","D90* R136T",2
"lib2","SARS-CoV-2","TTCATGGTAGCACAAA",10,65.66,6,-4.84,1.79,1.5,1.26,0.03,">1 nonsynonymous","C6R A105M Y159F Y165D Y178F",5
"lib2","SARS-CoV-2","TTCATGGTCTATATCG",4,1.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106Q F160T",2
"lib2","SARS-CoV-2","TTCATGTCATCGCCCT",1,25.86,7.99,-2.84,0.31,1.5,1.03,0.04,">1 nonsynonymous","V32E T63L D90T T100N P149E",5
"lib2","SARS-CoV-2","TTCATGTCTAAATCAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D98P Y143R V182G",3
"lib2","SARS-CoV-2","TTCATGTGCGCACAAA",3,47.63,10.1,-0.74,0.11,2.56,1.09,0.01,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","TTCATGTTACACTCCA",6,22.32,6,-4.84,2,3,1.12,0,">1 nonsynonymous","V77G L95T P197L",3
"lib2","SARS-CoV-2","TTCATGTTGGAATACC",10,72.8,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F70S I88Y",2
"lib2","SARS-CoV-2","TTCATTAAAATATAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","F17P S45K K56R I72V D90* P149T V153I",7
"lib2","SARS-CoV-2","TTCATTAACATATCAT",6,68.28,10.46,-0.38,0.04,2.91,1.07,0,"1 nonsynonymous","T15G",1
"lib2","SARS-CoV-2","TTCATTAACGGGGTAA",2,26.2,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","P82W C102Y Y119R",3
"lib2","SARS-CoV-2","TTCATTAATGCGAAGT",9,76.84,10.19,-0.64,0.04,2.83,1.05,0,">1 nonsynonymous","A67Y F160N S184V",3
"lib2","SARS-CoV-2","TTCATTACCAAATGAA",3,1.48,NA,NA,NA,NA,NA,NA,"stop","S19P L57M Q84* N118F N130Q",5
"lib2","SARS-CoV-2","TTCATTACTGCCCTAA",12,100.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","V52D Y66T N107L S139V Y159Q",5
"lib2","SARS-CoV-2","TTCATTAGAAACTGCA",8,66.46,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S36K P96H N120M P149T",4
"lib2","SARS-CoV-2","TTCATTAGAACACACA",11,249.58,10.42,-0.42,0.05,2.97,1.05,0,">1 nonsynonymous","V37Y V115G",2
"lib2","SARS-CoV-2","TTCATTAGAATAAGGA",21,418.7,8.48,-2.35,0.09,2.85,1.05,0,">1 nonsynonymous","F134M A145D",2
"lib2","SARS-CoV-2","TTCATTAGACATAATA",4,72.11,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","R27M Y35N S45T L60S F134Q Y165S",6
"lib2","SARS-CoV-2","TTCATTCCTATGAACA",1,9.52,11.05,0.21,0.09,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCATTCCTGGACGAG",4,51.78,8.43,-2.4,0.13,2.24,1.05,0.01,">1 nonsynonymous","Y35A Q84R L125P F156T P197I",5
"lib2","SARS-CoV-2","TTCATTCCTTCCCAAT",3,1.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7R T15N C49S F62H P82W",5
"lib2","SARS-CoV-2","TTCATTCGTGCACGGA",4,27.68,6,-4.84,2,1.5,1.13,0.02,"1 nonsynonymous","F167A",1
"lib2","SARS-CoV-2","TTCATTCTGAAAGTAA",3,11.63,10.1,-0.74,0.14,2.64,1.08,0.01,">1 nonsynonymous","D98W S129M",2
"lib2","SARS-CoV-2","TTCATTCTGACTCGGA",7,77.25,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","I2S C49Y N110L G117K F156I",5
"lib2","SARS-CoV-2","TTCATTCTGAGCAATT",3,91.79,8.2,-2.64,0.11,1.5,1.12,0,">1 nonsynonymous","F62A L162F Y178L",3
"lib2","SARS-CoV-2","TTCATTCTGCCTACCT",9,129.62,10.93,0.1,0.05,2.94,1.07,0,"1 nonsynonymous","L122S",1
"lib2","SARS-CoV-2","TTCATTCTGTACTAAA",9,145.26,10.88,0.05,0.04,2.96,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCATTGAACTCAACG",5,0.61,NA,NA,NA,NA,NA,NA,"stop","F12S L183*",2
"lib2","SARS-CoV-2","TTCATTGGTACCTACA",5,0.09,NA,NA,NA,NA,NA,NA,"stop","L60A E135* V182D",3
"lib2","SARS-CoV-2","TTCATTGTATCACACA",18,194.41,9.91,-0.92,0.07,2.32,1.11,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","TTCATTGTTCTACCCT",3,42.62,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V71N F134I R179M",3
"lib2","SARS-CoV-2","TTCATTGTTGAGCTGG",3,73.49,8.71,-2.12,0.1,2.91,1,0,">1 nonsynonymous","G83D F156N G174K",3
"lib2","SARS-CoV-2","TTCATTGTTTCAAAAG",1,492.65,9.38,-1.46,0.06,2.55,1.05,0,">1 nonsynonymous","Y123S N130L Y143L",3
"lib2","SARS-CoV-2","TTCATTTAGCGATAGC",13,92.65,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L5S S19L N64L D112Y E141P G155C F160S",7
"lib2","SARS-CoV-2","TTCATTTAGTTTTAAA",3,12.34,6,-4.84,2,1.5,1.17,0.04,">1 nonsynonymous","V65D V71H I88V",3
"lib2","SARS-CoV-2","TTCATTTCACATTAAA",7,82.71,9.82,-1.01,0.08,2.06,1.06,0,">1 nonsynonymous","V11G E154T V173L",3
"lib2","SARS-CoV-2","TTCATTTCCACTCATA",1,15.4,11.06,0.22,0.1,3,1.01,0,">1 nonsynonymous","L122G K128A T201D",3
"lib2","SARS-CoV-2","TTCATTTCGGAATTTG",1,4,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T100P",1
"lib2","SARS-CoV-2","TTCATTTTGAAACGTC",4,15.19,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","T3K D59G V77D V115L",4
"lib2","SARS-CoV-2","TTCCAAAAAAAGTACC",8,114.41,9.31,-1.53,0.1,1.73,1.05,0,"1 nonsynonymous","D137Y",1
"lib2","SARS-CoV-2","TTCCAAAAAATACCAG",1,6.59,11,0.16,0.07,2.91,1.06,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTCCAAAAATAAACGT",7,74.64,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I2G Y35C L95R E154V",4
"lib2","SARS-CoV-2","TTCCAAAAATACCACG",13,658.41,10.06,-0.78,0.05,2.62,1.01,0,">1 nonsynonymous","I2A A14V R136Q",3
"lib2","SARS-CoV-2","TTCCAAAAGTATTCCA",3,21.89,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","G9C A42L V77Y P177F",4
"lib2","SARS-CoV-2","TTCCAAACAATAAAGG",4,51.64,9.47,-1.37,0.07,2.92,1,0,">1 nonsynonymous","F62K N118D",2
"lib2","SARS-CoV-2","TTCCAAACAGAATGCA",1,6.43,10.13,-0.7,0.21,2.9,1,0.02,">1 nonsynonymous","F8Y R16N S41W V65R Q163I",5
"lib2","SARS-CoV-2","TTCCAAACTACCTCCA",2,14.71,6.84,-4,0.61,1.55,1.14,0.07,"1 nonsynonymous","G83P",1
"lib2","SARS-CoV-2","TTCCAAAGCCTCAGAC",5,48.69,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P54W Y93H Y123A D137R P149L",5
"lib2","SARS-CoV-2","TTCCAAAGGGACATCC",1,2.66,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","TTCCAAATAAAACTGT",2,30.25,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","L38H T63I F99K A105S K114E G116E",6
"lib2","SARS-CoV-2","TTCCAAATAAGACGTA",1,56.38,6.2,-4.64,0.7,1.5,1.16,0.02,">1 nonsynonymous","E10K Q84E C102L N120A Q163S",5
"lib2","SARS-CoV-2","TTCCAAATCAACATAA",3,64.23,10.67,-0.16,0.05,2.92,1.08,0,">1 nonsynonymous","V37L F44H",2
"lib2","SARS-CoV-2","TTCCAAATCCGAATAA",3,12.55,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","T55E T63M N107G K114V L183S",5
"lib2","SARS-CoV-2","TTCCAAATGAGCCCAT",11,132.76,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","L5K Y91M T100P",3
"lib2","SARS-CoV-2","TTCCAAATTAGACACC",7,104.27,9.5,-1.34,0.07,2.14,1.02,0,">1 nonsynonymous","N64C Q84R Q144L",3
"lib2","SARS-CoV-2","TTCCAAATTCCATCAT",1,21.06,9.43,-1.41,0.18,1.93,1.21,0.01,"1 nonsynonymous","G86D",1
"lib2","SARS-CoV-2","TTCCAACAAGTCGTTA",2,6.52,6,-4.84,2,1.5,1.01,0,">1 nonsynonymous","N4C V37Y F62N S147P F167R Q176L",6
"lib2","SARS-CoV-2","TTCCAACACCCAGCTA",4,81.2,10.8,-0.03,0.04,2.88,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCAACACGAAGTAT",4,54.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17N W106V",2
"lib2","SARS-CoV-2","TTCCAACACGATTTGA",2,55.79,9.47,-1.36,0.11,1.89,1.09,0,">1 nonsynonymous","S19R S36R",2
"lib2","SARS-CoV-2","TTCCAACAGTCACTCG",7,103.19,6.15,-4.68,0.72,1.5,1.11,0.02,">1 nonsynonymous","D59K I72T Y121V",3
"lib2","SARS-CoV-2","TTCCAACATACACGGA",16,162.15,10.2,-0.63,0.04,2.76,1.06,0,"1 nonsynonymous","P133T",1
"lib2","SARS-CoV-2","TTCCAACATCAACACC",2,7.44,10.34,-0.5,0.15,2.31,1,0.01,">1 nonsynonymous","T100G K132A",2
"lib2","SARS-CoV-2","TTCCAACCAAATGTGT",4,1.2,NA,NA,NA,NA,NA,NA,"stop","F62K D68A T85* N171W K198S",5
"lib2","SARS-CoV-2","TTCCAACCCGTGCCAT",3,41.03,10.92,0.09,0.04,2.89,1.15,0,"1 nonsynonymous","Q163G",1
"lib2","SARS-CoV-2","TTCCAACCGATTAAGT",8,85.85,8.27,-2.57,0.11,1.63,1.1,0,">1 nonsynonymous","L38Q D59A Y121L",3
"lib2","SARS-CoV-2","TTCCAACGAATAATTT",1,52.57,10.16,-0.68,0.05,2.68,1.11,0,">1 nonsynonymous","K48H D90T",2
"lib2","SARS-CoV-2","TTCCAACGACTTAGTG",8,62.17,6,-4.84,2,3,1.13,0,">1 nonsynonymous","P161L G172A",2
"lib2","SARS-CoV-2","TTCCAACTACTCCTTA",5,98.21,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N4L T15C V37M A105L S113K V180I H189C",7
"lib2","SARS-CoV-2","TTCCAACTGGCGCAAC",16,174.96,10.89,0.05,0.05,2.95,1.07,0,">1 nonsynonymous","I2T K199M",2
"lib2","SARS-CoV-2","TTCCAAGAAAGCAGAG",1,20.3,10.69,-0.15,0.09,2.82,1.2,0,"1 nonsynonymous","L95I",1
"lib2","SARS-CoV-2","TTCCAAGAACCTGATG",3,25.22,6,-4.84,2,3,1.16,0.01,">1 nonsynonymous","C49E G174R",2
"lib2","SARS-CoV-2","TTCCAAGAATTTAGGA",6,154.11,10.36,-0.47,0.04,2.91,1.07,0,">1 nonsynonymous","S36G G174Q",2
"lib2","SARS-CoV-2","TTCCAAGATAGCGTAC",6,6.63,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","V11I R16E S41W G166F L183P",5
"lib2","SARS-CoV-2","TTCCAAGATATCATTG",17,199.61,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V11S A33W Y175D",3
"lib2","SARS-CoV-2","TTCCAAGCAAACTGAC",9,91.51,8.4,-2.44,0.12,3,1,0.01,">1 nonsynonymous","K87L S113Q A192S",3
"lib2","SARS-CoV-2","TTCCAAGCGACCGTAC",2,41.07,9.71,-1.13,0.1,2.14,1.04,0,"1 nonsynonymous","Y50M",1
"lib2","SARS-CoV-2","TTCCAAGTAGCAACGT",5,82.25,9.71,-1.12,0.09,2.63,1.02,0,">1 nonsynonymous","C6T D34A Y39V",3
"lib2","SARS-CoV-2","TTCCAAGTGTTCCAGG",2,24.87,8.3,-2.54,0.34,1.5,1.12,0.03,">1 nonsynonymous","N120G R127T",2
"lib2","SARS-CoV-2","TTCCAAGTTATTAGTA",4,3.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10K S45I T63F D137C E186A",5
"lib2","SARS-CoV-2","TTCCAATAGGGAAAGC",1,9.39,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","G117V C150V",2
"lib2","SARS-CoV-2","TTCCAATGAATATTGA",20,353.13,10.83,0,0.04,2.92,1.07,0,"1 nonsynonymous","T201L",1
"lib2","SARS-CoV-2","TTCCAATGACGGAATT",3,9.41,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","N13L A89I L95R E135N Y143M",5
"lib2","SARS-CoV-2","TTCCAATGATTTGTAT",6,42.9,10.91,0.07,0.07,2.99,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCCAATGGCACTGAG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D75P Y175I",2
"lib2","SARS-CoV-2","TTCCAATGTAATAATT",6,141.79,10.84,0,0.05,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCAATTATCTAGGA",3,42.57,8.78,-2.06,0.06,2.53,1.07,0,">1 nonsynonymous","A18T I142S",2
"lib2","SARS-CoV-2","TTCCAATTGTACATAT",11,273.4,9.03,-1.81,0.05,2.94,1.07,0,"1 nonsynonymous","G166L",1
"lib2","SARS-CoV-2","TTCCAATTGTCCGTAG",6,67.14,6.35,-4.49,0.42,1.5,1.18,0.01,">1 nonsynonymous","A18M G86A N120L K128A",4
"lib2","SARS-CoV-2","TTCCACAAAAGGTCCA",2,13.28,6.84,-4,0.4,1.5,1.12,0.03,">1 nonsynonymous","F44I I72T E141V F160S S184Q",5
"lib2","SARS-CoV-2","TTCCACAAAGACACCT",2,64.31,6,-4.84,1.26,1.5,1.13,0,">1 nonsynonymous","K56L N64L P133L E141M G166F Y178G T201V",7
"lib2","SARS-CoV-2","TTCCACAACCACTGAT",3,32.75,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","L95Q",1
"lib2","SARS-CoV-2","TTCCACAAGAACCAGG",11,115.05,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","V11W R25W G152S T170R",4
"lib2","SARS-CoV-2","TTCCACACACATTAAT",14,121.24,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25Q D90H N151P T201K",4
"lib2","SARS-CoV-2","TTCCACACCCTATGAA",2,37.27,9.36,-1.48,0.04,2.91,1.09,0,">1 nonsynonymous","T100V G117V F160R",3
"lib2","SARS-CoV-2","TTCCACAGACGCGGAT",4,0.21,NA,NA,NA,NA,NA,NA,"stop","I28R L95* W106Y T148N",4
"lib2","SARS-CoV-2","TTCCACATATACAACA",1,21.34,6,-4.84,2,3,1.34,0.02,">1 nonsynonymous","C61L P96R V103R R127S",4
"lib2","SARS-CoV-2","TTCCACATTACACTAG",4,5.34,7.6,-3.24,0.48,1.5,1.02,0.07,">1 nonsynonymous","T3S K26Y G86K",3
"lib2","SARS-CoV-2","TTCCACCAAAAAAATA",5,105.21,10.1,-0.74,0.04,2.84,1.05,0,">1 nonsynonymous","A89V G152N",2
"lib2","SARS-CoV-2","TTCCACCAAGTGGAAT",4,5.85,6.15,-4.68,2,1.5,1.09,0.01,">1 nonsynonymous","T15I T55M A89L",3
"lib2","SARS-CoV-2","TTCCACCACCTCTAAT",9,90.05,10,-0.84,0.04,2.82,1.05,0,">1 nonsynonymous","F44H K56A N120W",3
"lib2","SARS-CoV-2","TTCCACCCGATTAAAA",2,29.51,10.93,0.09,0.06,2.84,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCACGAACTGCAGC",4,26.86,6.05,-4.79,0.56,3,1.09,0.01,">1 nonsynonymous","L5C N64D F126S Y165Q",4
"lib2","SARS-CoV-2","TTCCACGCAAAAGATA",1,6.17,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","F99T N157E",2
"lib2","SARS-CoV-2","TTCCACGGCCAAAACT",11,175.59,9.51,-1.32,0.08,1.8,1.07,0,"1 nonsynonymous","S69E",1
"lib2","SARS-CoV-2","TTCCACGGCTAATAGT",3,106.68,9.43,-1.4,0.04,1.89,1.08,0,">1 nonsynonymous","F12Y D59A F160M",3
"lib2","SARS-CoV-2","TTCCACTAACCGCAAA",4,99.18,10.42,-0.42,0.03,2.9,1.09,0,">1 nonsynonymous","Y123K T148P H189S",3
"lib2","SARS-CoV-2","TTCCACTAAGACAGAT",7,41,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","E10K G83S A89R F99D",4
"lib2","SARS-CoV-2","TTCCACTAATGTAAAT",3,13.3,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","K56T D90M V103A T170L G174L",5
"lib2","SARS-CoV-2","TTCCACTAGCGCGAAC",4,70.04,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","L5V Y119M F126T F167V",4
"lib2","SARS-CoV-2","TTCCACTGAAGTAATT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* F167W R179C",3
"lib2","SARS-CoV-2","TTCCACTGACGTGCCG",1,5.24,6,-4.84,2,1.5,1.06,0.02,"1 nonsynonymous","L95Y",1
"lib2","SARS-CoV-2","TTCCACTTAGGGAAAC",13,313.69,10.16,-0.67,0.04,2.78,1.04,0,">1 nonsynonymous","T46D D98A",2
"lib2","SARS-CoV-2","TTCCAGAAACACGAAA",2,0.33,NA,NA,NA,NA,NA,NA,"stop","S36* S139F",2
"lib2","SARS-CoV-2","TTCCAGAAAGTCTAAA",7,53.37,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","V71M A89R S113M N120V L131A S139T",6
"lib2","SARS-CoV-2","TTCCAGAACCGCGGTA",7,38.63,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","V103S E141Y Q163D",3
"lib2","SARS-CoV-2","TTCCAGACTGGCAATG",3,32.29,7.33,-3.51,0.41,1.5,1.1,0.05,">1 nonsynonymous","D34A G83I F99Y K114R L122V E141M",6
"lib2","SARS-CoV-2","TTCCAGAGAAGAAAAA",7,46.11,10.78,-0.05,0.05,2.88,1.12,0,"1 nonsynonymous","K56A",1
"lib2","SARS-CoV-2","TTCCAGATTTGGTTTG",22,11.54,NA,NA,NA,NA,NA,NA,"stop","W23F L95V G116*",3
"lib2","SARS-CoV-2","TTCCAGCAAATCCATG",2,67.94,8.38,-2.45,0.08,2.58,1.06,0,">1 nonsynonymous","T55F G117Y E141R",3
"lib2","SARS-CoV-2","TTCCAGCAGAAAGATA",13,214.95,10.58,-0.25,0.03,2.93,1.04,0,">1 nonsynonymous","A42Q G116V S129N",3
"lib2","SARS-CoV-2","TTCCAGGCTATACCAG",4,51.15,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","E10A I28Y Y39P A105H R124M",5
"lib2","SARS-CoV-2","TTCCAGGGAAAGCTGA",5,110.67,10.9,0.07,0.05,2.96,1.06,0,"1 nonsynonymous","S200I",1
"lib2","SARS-CoV-2","TTCCAGGGGGCACTTA",5,25.5,9.19,-1.64,0.17,2.21,1.03,0.01,">1 nonsynonymous","V11D W23P",2
"lib2","SARS-CoV-2","TTCCAGTAAACTCTCG",1,3.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144R P149I",2
"lib2","SARS-CoV-2","TTCCAGTACATTGAGT",5,53.41,9.97,-0.87,0.06,2.54,1.1,0,">1 nonsynonymous","T55H F62K D90R N120S T201K",5
"lib2","SARS-CoV-2","TTCCAGTCAGACCACC",3,32.28,10.87,0.03,0.06,2.91,1.1,0,"1 nonsynonymous","G51N",1
"lib2","SARS-CoV-2","TTCCAGTCCCCTACAT",2,50.32,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S45C A89L",2
"lib2","SARS-CoV-2","TTCCAGTCTATCTTGG",7,80.68,9.98,-0.86,0.05,2.73,1.06,0,">1 nonsynonymous","D97K G152I",2
"lib2","SARS-CoV-2","TTCCAGTGTTCCGATT",2,2.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40Y F70T D90M T140F L183R",5
"lib2","SARS-CoV-2","TTCCAGTTATATTACA",5,28.29,6.41,-4.43,0.82,1.5,1.16,0.04,">1 nonsynonymous","A33V S45Y G51M K94A",4
"lib2","SARS-CoV-2","TTCCAGTTGTATTCGT",5,70.34,10.01,-0.82,0.08,2.8,1.05,0,">1 nonsynonymous","E10T C61P G155A",3
"lib2","SARS-CoV-2","TTCCATAAAAAGCCGC",9,183.48,10.76,-0.08,0.04,2.93,1.07,0,">1 nonsynonymous","C195L K199W",2
"lib2","SARS-CoV-2","TTCCATAAAGACTATG",1,14.62,9.2,-1.63,0.1,2.21,1.01,0,">1 nonsynonymous","C61Q D112V",2
"lib2","SARS-CoV-2","TTCCATAACAAGATAG",6,28.56,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","N13F S45H T63L L122E C150R",5
"lib2","SARS-CoV-2","TTCCATAAGAAAGTGA",2,16.24,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S K128E V180Y",3
"lib2","SARS-CoV-2","TTCCATAATAACTAAG",7,33.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P T63I N120F E135A P197N",5
"lib2","SARS-CoV-2","TTCCATAATTTTTAGA",8,22.91,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T15L G101S Y119W",3
"lib2","SARS-CoV-2","TTCCATACGGCCGGAA",5,175.76,10.07,-0.77,0.05,2.43,1.02,0,">1 nonsynonymous","S36T D59H Y165F",3
"lib2","SARS-CoV-2","TTCCATACTCTCCTAG",4,54.18,6.2,-4.63,0.54,1.5,1.1,0.01,">1 nonsynonymous","N58I R127V Y159M",3
"lib2","SARS-CoV-2","TTCCATAGAAACAGTT",2,17.53,6.75,-4.08,0.44,1.5,1.22,0.03,">1 nonsynonymous","F12K R78E E135W E141N",4
"lib2","SARS-CoV-2","TTCCATAGAATCCCTC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F44N",1
"lib2","SARS-CoV-2","TTCCATCAAAATAGTA",8,2.06,NA,NA,NA,NA,NA,NA,"stop","N1* F62T",2
"lib2","SARS-CoV-2","TTCCATCAAGTATTAT",2,26.59,10.6,-0.23,0.25,2.44,1.06,0.03,"1 nonsynonymous","A105Y",1
"lib2","SARS-CoV-2","TTCCATCACCAGTCAA",1,5.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G101D G152C P169S",3
"lib2","SARS-CoV-2","TTCCATCAGTGACGTG",12,0.5,NA,NA,NA,NA,NA,NA,"stop","V37G Y50D D98V N107* P149E K199D",6
"lib2","SARS-CoV-2","TTCCATCCGATACACA",5,7.21,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","T3E V103D R136D",3
"lib2","SARS-CoV-2","TTCCATCTGATATTAC",8,21.31,6,-4.84,1.34,1.5,1.13,0.01,">1 nonsynonymous","F99S I142V P161L",3
"lib2","SARS-CoV-2","TTCCATGACGAAACGC",15,232.8,10.61,-0.22,0.03,2.9,1.09,0,">1 nonsynonymous","V77R A105M",2
"lib2","SARS-CoV-2","TTCCATGCGTGCTTAC",3,0.09,NA,NA,NA,NA,NA,NA,"stop","L95* D112Y P149L F160L",4
"lib2","SARS-CoV-2","TTCCATGCTAACAACG",4,26.15,9.5,-1.33,0.07,3,1.01,0,">1 nonsynonymous","G116H N130Q Y175H",3
"lib2","SARS-CoV-2","TTCCATGCTGAAAACT",5,29.9,10.3,-0.54,0.08,2.99,1.02,0,">1 nonsynonymous","S36N E154V",2
"lib2","SARS-CoV-2","TTCCATGGCGCTTTGT",8,150.68,9.46,-1.38,0.04,2.69,1.05,0,">1 nonsynonymous","T46S Y121A",2
"lib2","SARS-CoV-2","TTCCATGGTTAAAGAG",2,28.69,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F99Y V180L",2
"lib2","SARS-CoV-2","TTCCATGTGTTACGGC",1,0.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D59L V71R G86C",3
"lib2","SARS-CoV-2","TTCCATGTTACAGTAC",6,35.06,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","R25E K48C N107S T201S",4
"lib2","SARS-CoV-2","TTCCATTAATAGTGAC",3,7.54,6.6,-4.24,0.85,1.5,1.1,0.01,">1 nonsynonymous","L57N S108Y R136L",3
"lib2","SARS-CoV-2","TTCCATTACCTAACAG",3,18.59,10.17,-0.66,0.08,2.94,1.07,0,">1 nonsynonymous","L60H S164L",2
"lib2","SARS-CoV-2","TTCCATTAGTCCAGAA",1,16.65,10.07,-0.76,0.09,2.71,1,0,">1 nonsynonymous","N120S K128C F134H",3
"lib2","SARS-CoV-2","TTCCATTATATCTAGT",2,69.17,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","I28M K56V P82Q G166L Y175T S200G",6
"lib2","SARS-CoV-2","TTCCATTATGCATGTA",1,5.1,6,-4.84,2,3,1.28,0.05,">1 nonsynonymous","F8G C49S T100Y F160S V173I",5
"lib2","SARS-CoV-2","TTCCATTGAAGACAAC",2,52.59,10.77,-0.06,0.05,2.93,1.07,0,">1 nonsynonymous","V32K P54R",2
"lib2","SARS-CoV-2","TTCCATTGGTAAACAA",4,88.12,8.43,-2.41,0.15,2.22,1.09,0.01,">1 nonsynonymous","V32Y Y165Q",2
"lib2","SARS-CoV-2","TTCCATTTGCACAAAA",5,50.6,10.46,-0.38,0.06,2.95,1.04,0,">1 nonsynonymous","S41L N58M",2
"lib2","SARS-CoV-2","TTCCCAAACTTAGAAT",10,202.15,9.62,-1.22,0.05,2.41,1.04,0,">1 nonsynonymous","F44E D59K Q144T",3
"lib2","SARS-CoV-2","TTCCCAAATCCTAGTT",7,25.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E141S V182F",2
"lib2","SARS-CoV-2","TTCCCAACATAGAAAT",9,90.61,10.1,-0.74,0.03,2.91,1.03,0,"1 nonsynonymous","C6Q",1
"lib2","SARS-CoV-2","TTCCCAACCCAGGCAG",6,2.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13H V32H V103R L162W",4
"lib2","SARS-CoV-2","TTCCCAACTATAGTGA",8,26.52,8.37,-2.47,0.25,1.5,1,0.02,">1 nonsynonymous","C6M A22D L122N T140Y",4
"lib2","SARS-CoV-2","TTCCCAAGAACGCAGA",1,22.55,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A14W S36H T63S N92L",4
"lib2","SARS-CoV-2","TTCCCAATGGACGTTA",8,23.65,9.53,-1.3,0.07,1.9,1.03,0,">1 nonsynonymous","I28N N151F",2
"lib2","SARS-CoV-2","TTCCCACACAAAAAGG",2,2.19,NA,NA,NA,NA,NA,NA,"stop","D34F S53P V77* D97H S139A",5
"lib2","SARS-CoV-2","TTCCCACACCTTAAAA",4,27.27,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","W23F I80L Y91W S139A",4
"lib2","SARS-CoV-2","TTCCCACCAGTTTTAA",3,110.74,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","Y66T D112P K198T",3
"lib2","SARS-CoV-2","TTCCCACCCTCTCTAC",4,17.09,9.48,-1.36,0.27,1.5,1,0.05,"1 nonsynonymous","A105D",1
"lib2","SARS-CoV-2","TTCCCACGTTCATTAA",5,51.51,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","N40M A89K G116V P169I",4
"lib2","SARS-CoV-2","TTCCCACTAATGGGCC",3,135.43,10.86,0.02,0.04,3,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCCCAGAGAATTATT",12,203.44,10.56,-0.27,0.03,2.92,1.07,0,"1 nonsynonymous","G83E",1
"lib2","SARS-CoV-2","TTCCCAGGACGCGAGC",1,5.39,10.77,-0.06,0.02,3,1.01,0,"1 nonsynonymous","S53Y",1
"lib2","SARS-CoV-2","TTCCCAGGCCTTCCGA",2,94.26,9.64,-1.2,0.06,2.71,1.12,0,">1 nonsynonymous","R73L N110K",2
"lib2","SARS-CoV-2","TTCCCATAAAACCTCC",7,0.43,NA,NA,NA,NA,NA,NA,"stop","C49* T55S P161I",3
"lib2","SARS-CoV-2","TTCCCATAGATAGATA",1,22.79,6,-4.84,1.93,3,1.13,0.01,">1 nonsynonymous","I28R Y93I F134Y",3
"lib2","SARS-CoV-2","TTCCCATATAACAGCA",2,33.8,10.6,-0.24,0.05,2.89,1.08,0,"1 nonsynonymous","F134R",1
"lib2","SARS-CoV-2","TTCCCCAAGGACCCAC",7,44.58,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V20R D90H Y175R",3
"lib2","SARS-CoV-2","TTCCCCAAGGTACAAC",6,101.73,10.32,-0.52,0.03,2.81,1.06,0,">1 nonsynonymous","D90Y V153G",2
"lib2","SARS-CoV-2","TTCCCCAGAAATCGAC",10,186.59,10.38,-0.46,0.04,2.87,1.05,0,">1 nonsynonymous","I2M K56W",2
"lib2","SARS-CoV-2","TTCCCCATCAGTCGGG",3,98.59,10.69,-0.15,0.04,2.92,1.04,0,">1 nonsynonymous","T3V E141R",2
"lib2","SARS-CoV-2","TTCCCCCACCAAGTGA",3,52.72,6,-4.84,2,2.19,1.19,0.01,">1 nonsynonymous","V11G V37H F70V W106R Y143G",5
"lib2","SARS-CoV-2","TTCCCCCACGCTAATT",6,122.57,9.78,-1.06,0.06,2.12,1.03,0,">1 nonsynonymous","V77A N120R",2
"lib2","SARS-CoV-2","TTCCCCCTATTTTGAT",9,248.48,10.59,-0.24,0.04,2.87,1.07,0,"1 nonsynonymous","F156W",1
"lib2","SARS-CoV-2","TTCCCCGCATAAAACA",6,26.28,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Y35R L60R I88M N107G",4
"lib2","SARS-CoV-2","TTCCCCGCCTATGAAA",5,115.7,8.39,-2.45,0.13,2.77,1.1,0.01,">1 nonsynonymous","G9Q Y175S",2
"lib2","SARS-CoV-2","TTCCCCTAAAGGTGTG",5,0.25,NA,NA,NA,NA,NA,NA,"stop","F17L R25I K94M D97* N171S",5
"lib2","SARS-CoV-2","TTCCCCTAACAGAAAG",2,28.46,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","A33E S113G T140A P161N N171M",5
"lib2","SARS-CoV-2","TTCCCCTCCCTCGCTA",14,105.51,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V77K F167L",2
"lib2","SARS-CoV-2","TTCCCCTTAACATAAC",7,1.06,NA,NA,NA,NA,NA,NA,"stop","K26R V77P P96Q Q176*",4
"lib2","SARS-CoV-2","TTCCCCTTCAATCTAT",2,0.67,NA,NA,NA,NA,NA,NA,"stop","F134*",1
"lib2","SARS-CoV-2","TTCCCCTTGCACGACT",7,73.42,8.28,-2.55,0.1,2.05,1.09,0,">1 nonsynonymous","I2L D112L I138D",3
"lib2","SARS-CoV-2","TTCCCCTTGCGTTGCT",1,8.73,NA,NA,NA,NA,NA,NA,"stop","F44L Q84* A89H G152F F156T",5
"lib2","SARS-CoV-2","TTCCCGAATTATTAGG",15,6.25,NA,NA,NA,NA,NA,NA,"stop","Y35S V77A A81C T85A F185*",5
"lib2","SARS-CoV-2","TTCCCGACCTATACAA",5,40.93,6.16,-4.68,0.9,1.5,1.12,0.03,">1 nonsynonymous","S41A D137T Q176T",3
"lib2","SARS-CoV-2","TTCCCGACTGTATTGA",6,16.94,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13K A18H K26S P82F Y143F G172N T201L",7
"lib2","SARS-CoV-2","TTCCCGCCCTTAAACA",3,0.27,NA,NA,NA,NA,NA,NA,"stop","V37E G51M G152I Q176*",4
"lib2","SARS-CoV-2","TTCCCGCGACGTTTTG",4,54.18,6,-4.84,2,3,1.15,0,">1 nonsynonymous","S108Y C150A",2
"lib2","SARS-CoV-2","TTCCCGCTCAAAAGAT",11,102.4,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F17R D68I S108W",3
"lib2","SARS-CoV-2","TTCCCGGGTATGGATT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77R K94T I104G G146D",4
"lib2","SARS-CoV-2","TTCCCGGTTAAATCAC",4,36.35,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","K87N P161L",2
"lib2","SARS-CoV-2","TTCCCGTAGATTCGGA",4,40.77,9.88,-0.96,0.09,2.53,1.07,0,">1 nonsynonymous","F12L A81R",2
"lib2","SARS-CoV-2","TTCCCGTCAATTTCCT",1,47.17,9.72,-1.12,0.09,2.86,1,0,"1 nonsynonymous","N120T",1
"lib2","SARS-CoV-2","TTCCCTAACTTGATTA",4,0.19,NA,NA,NA,NA,NA,NA,"stop","L125N Q144M G172* P177C S200N",5
"lib2","SARS-CoV-2","TTCCCTACGAGTAACT",11,48.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y W106F C158P P169Q",4
"lib2","SARS-CoV-2","TTCCCTATAACACGGT",1,1.49,NA,NA,NA,NA,NA,NA,"stop","A105*",1
"lib2","SARS-CoV-2","TTCCCTATAGTTACCT",3,12.08,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","T46L I88T N107C V182C",4
"lib2","SARS-CoV-2","TTCCCTATTAACTACT",8,245.88,10.25,-0.58,0.03,2.84,1.01,0,"1 nonsynonymous","P133H",1
"lib2","SARS-CoV-2","TTCCCTCAACCAAATT",1,22.12,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","V37T S69F F99D",3
"lib2","SARS-CoV-2","TTCCCTGGCCCGGTCA",6,28.7,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","E10V K56L V77F",3
"lib2","SARS-CoV-2","TTCCCTTATTCGCTAT",3,15.25,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","V11S Y50S N118F G146F N151I T201C",6
"lib2","SARS-CoV-2","TTCCCTTCCCCCTAAT",10,190.92,10.8,-0.03,0.05,2.93,1.09,0,"1 nonsynonymous","V32M",1
"lib2","SARS-CoV-2","TTCCCTTGAAGTCAAA",12,1.69,NA,NA,NA,NA,NA,NA,"stop","P161Y K199*",2
"lib2","SARS-CoV-2","TTCCGAAACATGTTAT",2,32.48,10.34,-0.5,0.09,2.78,1.05,0,">1 nonsynonymous","A14T V37K G196L T201H",4
"lib2","SARS-CoV-2","TTCCGAAAGCCCCGCA",6,191.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35E F47P G166L",3
"lib2","SARS-CoV-2","TTCCGAAATAACTATT",13,148.59,10.82,-0.02,0.05,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCGAAATAGCTTAG",8,191.62,8.62,-2.21,0.08,2.8,1.06,0,">1 nonsynonymous","T55I G146N G174R",3
"lib2","SARS-CoV-2","TTCCGAACTAGCATAT",12,112.63,10.84,0,0.08,2.87,1.06,0,"1 nonsynonymous","P149Q",1
"lib2","SARS-CoV-2","TTCCGAACTATAACAC",1,0.64,NA,NA,NA,NA,NA,NA,"stop","K48* T100L L122S",3
"lib2","SARS-CoV-2","TTCCGAAGAAAGACGC",1,54.25,8.33,-2.51,0.22,1.82,1.12,0.02,">1 nonsynonymous","R73D K94R",2
"lib2","SARS-CoV-2","TTCCGAAGCGTATATG",7,124.34,9.77,-1.07,0.07,2.66,1.03,0,">1 nonsynonymous","C6K S41E T201N",3
"lib2","SARS-CoV-2","TTCCGAAGGGGTAGAA",10,545.38,8.83,-2,0.04,2.77,1.07,0,">1 nonsynonymous","T3H N64L K87N Y121M G166N",5
"lib2","SARS-CoV-2","TTCCGAATCGAACTCG",4,47.83,8.89,-1.94,0.13,1.75,1.09,0.01,">1 nonsynonymous","G9E Y91T P149I",3
"lib2","SARS-CoV-2","TTCCGAATTCCCCTCA",12,245.74,10.81,-0.03,0.04,2.9,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCCGACACACCAGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","K56Y L122* R136E Y159M",4
"lib2","SARS-CoV-2","TTCCGACCCTTATCAT",3,63.15,10.85,0.02,0.06,2.93,1.07,0,"1 nonsynonymous","L5K",1
"lib2","SARS-CoV-2","TTCCGACCGTACCTGC",1,39.56,9.76,-1.08,0.17,2.63,1.08,0.01,">1 nonsynonymous","I2L A105Y",2
"lib2","SARS-CoV-2","TTCCGACGCTAAACCC",1,4.55,NA,NA,NA,NA,NA,NA,"stop","P96* Y165C",2
"lib2","SARS-CoV-2","TTCCGACTGCACAAAC",4,119.22,10.46,-0.37,0.03,2.89,1.09,0,">1 nonsynonymous","D97C K132M",2
"lib2","SARS-CoV-2","TTCCGACTTTGGCGAA",1,4.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15N A33T Y39F N64Y P96R L122W R127L F134L",8
"lib2","SARS-CoV-2","TTCCGAGACATCCTCG",6,20.2,6,-4.84,2,1.5,1.08,0,">1 nonsynonymous","D112K V173W",2
"lib2","SARS-CoV-2","TTCCGAGGAGAAAAAA",5,94.75,10.2,-0.63,0.03,2.91,1.03,0,">1 nonsynonymous","D59T V115Q T140W T148I F160V P197L",6
"lib2","SARS-CoV-2","TTCCGAGGAGAAGAGA",1,17.4,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","P7A P82M G86T N107F",4
"lib2","SARS-CoV-2","TTCCGAGGCAGTGTAA",2,26.32,8.38,-2.46,0.23,1.81,1.09,0.02,">1 nonsynonymous","K56W N118K H189I",3
"lib2","SARS-CoV-2","TTCCGAGGGACCTACA",13,190.2,7.55,-3.28,0.25,1.5,1.14,0.02,">1 nonsynonymous","L60P P82V",2
"lib2","SARS-CoV-2","TTCCGAGTACAGCACC",5,14.57,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","S19K D34N G86L E154N L183C",5
"lib2","SARS-CoV-2","TTCCGAGTCGAACGCT",7,57.35,10.55,-0.28,0.04,2.98,1,0,">1 nonsynonymous","S29H D90C",2
"lib2","SARS-CoV-2","TTCCGAGTTCCATAAA",5,56.67,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","N58K G86F Y121F",3
"lib2","SARS-CoV-2","TTCCGATACAACCAAC",4,43.89,8.74,-2.1,0.14,2.85,1.03,0.01,">1 nonsynonymous","K87D N107P",2
"lib2","SARS-CoV-2","TTCCGATAGGTTAACA",1,0.05,NA,NA,NA,NA,NA,NA,"stop","Y35C G86C D112*",3
"lib2","SARS-CoV-2","TTCCGATGCCCTTTCT",4,297.99,10.81,-0.03,0.05,2.91,1.12,0,">1 nonsynonymous","P149D K198V",2
"lib2","SARS-CoV-2","TTCCGATTTGTTAGGA",8,208.26,6,-4.84,0.68,1.5,1.19,0.01,"1 nonsynonymous","C158Y",1
"lib2","SARS-CoV-2","TTCCGCAACAAAGCTT",1,15.15,6.27,-4.57,0.66,1.51,1.17,0.01,"1 nonsynonymous","D68Q",1
"lib2","SARS-CoV-2","TTCCGCACCGTTACGT",10,106.57,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","W23V G51K V115Y P169N",4
"lib2","SARS-CoV-2","TTCCGCAGCAGAAGGA",5,3.48,NA,NA,NA,NA,NA,NA,"stop","E10M N40I D112* P149G",4
"lib2","SARS-CoV-2","TTCCGCCCGATGAATA",3,28.85,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F44C Y91D N130F",3
"lib2","SARS-CoV-2","TTCCGCTACATTTGCT",8,89.14,9.68,-1.15,0.12,1.96,1.1,0.01,">1 nonsynonymous","R136G K199P",2
"lib2","SARS-CoV-2","TTCCGCTGCATGGAAT",13,56.46,10.05,-0.79,0.11,2.58,1.04,0.01,">1 nonsynonymous","A42P D90Y K128I",3
"lib2","SARS-CoV-2","TTCCGGAAATTATAAC",1,12.64,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","G83C T100S W106L",3
"lib2","SARS-CoV-2","TTCCGGAATAGTTTGG",4,5.02,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","F12V R25K",2
"lib2","SARS-CoV-2","TTCCGGACCACAACGC",17,414.18,10.82,-0.02,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCGGAGGGACCATT",10,74.82,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F8Y V32A C150M",3
"lib2","SARS-CoV-2","TTCCGGATACACTCCG",4,45.53,9.85,-0.98,0.11,1.95,1.02,0.01,">1 nonsynonymous","N1R R127N",2
"lib2","SARS-CoV-2","TTCCGGCAAGGCGAAA",11,9.27,NA,NA,NA,NA,NA,NA,"stop","P7N S29* D68K",3
"lib2","SARS-CoV-2","TTCCGGCTACTACTTG",8,95.52,10.31,-0.53,0.04,2.86,1.05,0,">1 nonsynonymous","I2L N13F",2
"lib2","SARS-CoV-2","TTCCGGTCTAGTACTT",1,29.06,10.82,-0.02,0.02,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCGGTGCCAAGAGT",5,52.41,9.62,-1.21,0.09,2.54,1.08,0,">1 nonsynonymous","C6L N30T",2
"lib2","SARS-CoV-2","TTCCGTAAACCCTATT",5,59.95,6,-4.84,2,3,1.09,0,">1 nonsynonymous","N92Q Q144V",2
"lib2","SARS-CoV-2","TTCCGTATCCAAAGAG",4,44.72,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F44I G86M S129R R136Y",4
"lib2","SARS-CoV-2","TTCCGTCCAGTTTACC",8,185.8,10.31,-0.53,0.03,2.89,1.06,0,"1 nonsynonymous","C6N",1
"lib2","SARS-CoV-2","TTCCGTCTCCGTTTGG",4,16.61,6.79,-4.04,0.47,1.5,1.14,0.07,">1 nonsynonymous","W106A F185S",2
"lib2","SARS-CoV-2","TTCCGTCTGGGACATT",4,2.74,NA,NA,NA,NA,NA,NA,"stop","D98S F126T Y143Q R179*",4
"lib2","SARS-CoV-2","TTCCGTGATAACTAAA",13,77.85,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","F12L A105E",2
"lib2","SARS-CoV-2","TTCCGTGTTCAGGCTA",2,31.88,10.85,0.02,0.05,2.94,1.09,0,"1 nonsynonymous","N1M",1
"lib2","SARS-CoV-2","TTCCGTTATGAGATGG",10,28.08,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","Y123E V181A F185K",3
"lib2","SARS-CoV-2","TTCCGTTCATAGTCTA",4,53,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","K56P C150I",2
"lib2","SARS-CoV-2","TTCCGTTTATGCCATT",10,125.44,11.04,0.2,0.04,2.92,1.09,0,">1 nonsynonymous","N64Y N110S Q168H",3
"lib2","SARS-CoV-2","TTCCGTTTCGCCGTAA",5,12.55,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","T3M T15G T85D N151T",4
"lib2","SARS-CoV-2","TTCCTAAAAAATGATC",7,74.76,8.62,-2.21,0.1,2.37,1.07,0,">1 nonsynonymous","L5A S41F Y91A Y119S",4
"lib2","SARS-CoV-2","TTCCTAAAACTCCGTT",2,50.74,10.63,-0.21,0.05,2.95,1.05,0,"1 nonsynonymous","N40W",1
"lib2","SARS-CoV-2","TTCCTAAAATCGGGCA",2,1.84,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101F",1
"lib2","SARS-CoV-2","TTCCTAAAGTGTGTAA",2,52.65,10.77,-0.07,0.03,2.97,1.05,0,">1 nonsynonymous","T3S N171S",2
"lib2","SARS-CoV-2","TTCCTAACATTGTTAA",3,33.18,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","D90K W106T E135L Q144S",4
"lib2","SARS-CoV-2","TTCCTAAGCACAGGTC",1,24.72,6.4,-4.43,0.72,1.5,1.17,0.04,">1 nonsynonymous","L38S D90N W106L G146S H189D",5
"lib2","SARS-CoV-2","TTCCTAAGTAATGGGA",7,57.84,9.83,-1,0.11,1.92,1.08,0.01,">1 nonsynonymous","T85H D97Q W106V S129H",4
"lib2","SARS-CoV-2","TTCCTAATAAAGCTGA",4,44.43,10.28,-0.56,0.1,2.56,1.05,0.01,"1 nonsynonymous","A22V",1
"lib2","SARS-CoV-2","TTCCTAATATTAAAAG",4,50.43,10.93,0.1,0.07,2.89,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCTAATCAACATTA",4,48.74,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A18I N157H F167A T201Y",4
"lib2","SARS-CoV-2","TTCCTAATTCTACAGG",2,48.18,6.11,-4.73,1.58,1.5,1.35,0.06,">1 nonsynonymous","T46F D59E T85L D112R F126L G155R Y178F",7
"lib2","SARS-CoV-2","TTCCTACATAGAAGAC",3,32.81,10.6,-0.23,0.09,2.79,1.17,0,">1 nonsynonymous","L5S F44P G51N I104F",4
"lib2","SARS-CoV-2","TTCCTACATCTGACAT",1,0.07,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A K87S V103G",3
"lib2","SARS-CoV-2","TTCCTACCAAGTACAA",6,23.55,8.98,-1.86,0.34,1.5,1,0.05,">1 nonsynonymous","T55K G83N C102V Y123F E135R",5
"lib2","SARS-CoV-2","TTCCTACCACTATATA",1,18.55,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","N13L Y66I Y93H Y119M S139R P197H",6
"lib2","SARS-CoV-2","TTCCTACCACTGCTTT",24,8.14,NA,NA,NA,NA,NA,NA,"stop","P7H E10* D34L F44D",4
"lib2","SARS-CoV-2","TTCCTACGATGATTCA",1,87,10.32,-0.52,0.03,2.91,1.06,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","TTCCTACTATCAATCG",4,16.7,NA,NA,NA,NA,NA,0.32,">1 nonsynonymous","N13Q Y165R",2
"lib2","SARS-CoV-2","TTCCTAGAGATCTGAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83L V115F S139A L187I P197N K198N",6
"lib2","SARS-CoV-2","TTCCTAGCAATATAGT",3,81.15,10.54,-0.3,0.04,2.96,1.04,0,">1 nonsynonymous","R16K I138Y T148S",3
"lib2","SARS-CoV-2","TTCCTAGCATAGTCAG",2,6.78,10.91,0.07,0.1,2.88,1.12,0,"1 nonsynonymous","D90S",1
"lib2","SARS-CoV-2","TTCCTAGGCATACCGT",14,192.46,10.82,-0.01,0.04,2.89,1.12,0,"1 nonsynonymous","V37I",1
"lib2","SARS-CoV-2","TTCCTAGTACCAACGC",1,14.38,10.77,-0.07,0.06,2.94,1.1,0,"1 nonsynonymous","A192S",1
"lib2","SARS-CoV-2","TTCCTAGTCCACCTGG",2,83.94,10.68,-0.16,0.07,2.68,1.07,0,"1 nonsynonymous","D90E",1
"lib2","SARS-CoV-2","TTCCTATAAAAAAGCA",6,47.98,10.59,-0.25,0.04,2.98,1.05,0,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","TTCCTATACGTTACTA",5,20.48,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S41T K56E I80T F99S G116S F134V G174V",7
"lib2","SARS-CoV-2","TTCCTATCAAACGAAT",5,48.47,10.72,-0.11,0.05,2.86,1.16,0,"1 nonsynonymous","R27Q",1
"lib2","SARS-CoV-2","TTCCTATCCAATATTT",11,225.28,10.72,-0.12,0.04,2.87,1.1,0,"1 nonsynonymous","D97T",1
"lib2","SARS-CoV-2","TTCCTATCCTGCGTAA",6,29.73,10.5,-0.34,0.06,2.97,1.05,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","TTCCTATCGAAGCACA",2,60.88,9.77,-1.06,0.12,2.26,1.04,0.01,"1 nonsynonymous","I28T",1
"lib2","SARS-CoV-2","TTCCTATGTAAAAAAC",1,79.98,10.35,-0.48,0.03,2.92,1.03,0,">1 nonsynonymous","S53P D97Y K198D",3
"lib2","SARS-CoV-2","TTCCTATTACCTGGCT",1,20.64,10.66,-0.17,0.1,2.77,1.22,0.01,"1 nonsynonymous","L122W",1
"lib2","SARS-CoV-2","TTCCTCACACAAATTA",6,1.01,NA,NA,NA,NA,NA,NA,"stop","Y119* T170M",2
"lib2","SARS-CoV-2","TTCCTCACGCGGTCGT",3,25.5,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","C49H W106L S113A F134G",4
"lib2","SARS-CoV-2","TTCCTCACTTTACCCC",2,40.84,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N4A S43T F167K",3
"lib2","SARS-CoV-2","TTCCTCATTCTACTCA",1,4.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R S41L P133T I142H",4
"lib2","SARS-CoV-2","TTCCTCCAAGGGGAGT",3,28.54,6,-4.84,2,3,1.11,0,">1 nonsynonymous","D68I I88M L95I V103I A145V",5
"lib2","SARS-CoV-2","TTCCTCCATTACATCT",3,44.11,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P82Q Y93F T100S G174E",4
"lib2","SARS-CoV-2","TTCCTCCGATCCGTTA",1,13.72,10.93,0.09,0.1,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCCTCCTAATCCCAA",4,43.13,8.8,-2.03,0.1,1.88,1.06,0,">1 nonsynonymous","G86K L188N",2
"lib2","SARS-CoV-2","TTCCTCGAGTCAAATA",1,3.83,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68P Y178L",2
"lib2","SARS-CoV-2","TTCCTCGCATGCTTTT",6,56.86,9.53,-1.3,0.08,2.08,1.03,0,"1 nonsynonymous","I88C",1
"lib2","SARS-CoV-2","TTCCTCGTTCCTCTAG",12,261.38,9.42,-1.41,0.05,2.69,1.06,0,"1 nonsynonymous","G74Y",1
"lib2","SARS-CoV-2","TTCCTCTAATTACCTA",5,58.04,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","Y66N A105D C150R",3
"lib2","SARS-CoV-2","TTCCTCTATGGAAAAA",6,60.88,10.52,-0.31,0.06,2.76,1.15,0,">1 nonsynonymous","A42P Q84H N130T",3
"lib2","SARS-CoV-2","TTCCTCTCACCAGTGG",2,48.29,10.7,-0.13,0.03,2.92,1.11,0,"1 nonsynonymous","S43G",1
"lib2","SARS-CoV-2","TTCCTCTGACCTATCA",7,19.03,9.34,-1.5,0.16,2.02,1.02,0.01,">1 nonsynonymous","A105F E141G",2
"lib2","SARS-CoV-2","TTCCTCTTGAATGATC",8,73.62,8.6,-2.23,0.1,2.82,1.07,0,">1 nonsynonymous","D98P G166L",2
"lib2","SARS-CoV-2","TTCCTGAAAAGGCACA",23,139.3,9.12,-1.71,0.09,1.73,1.06,0,">1 nonsynonymous","T100Q W106V P149N",3
"lib2","SARS-CoV-2","TTCCTGAAACCTATCA",2,81.03,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y35M D112S Y119F",3
"lib2","SARS-CoV-2","TTCCTGAAACGACCAA",1,26.05,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","C6Y E10G N58E I72R P96M Y123E G152L Y159V",8
"lib2","SARS-CoV-2","TTCCTGAACAAATTGA",2,4.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K87W D112V E135V",3
"lib2","SARS-CoV-2","TTCCTGAACATTAAAT",1,67.04,10.49,-0.34,0.07,2.96,1.04,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TTCCTGACAATTATTG",1,3.15,NA,NA,NA,NA,NA,NA,"stop","N118P I142L N151*",3
"lib2","SARS-CoV-2","TTCCTGATCTATGAGT",2,24.5,10.71,-0.12,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCCTGCACGTCTATC",4,0.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C49I P149R V181R",3
"lib2","SARS-CoV-2","TTCCTGCATAGGGAGT",1,13.42,6,-4.84,2,3,1.07,0,">1 nonsynonymous","Y50N L60H S69A",3
"lib2","SARS-CoV-2","TTCCTGCCAATATCTC",1,62.85,10.63,-0.21,0.04,2.93,1.07,0,">1 nonsynonymous","S45Y T55S T85R",3
"lib2","SARS-CoV-2","TTCCTGCCTTACCGAT",6,30.08,7.34,-3.49,0.23,1.52,1.18,0.03,">1 nonsynonymous","A33P K48S A81Y",3
"lib2","SARS-CoV-2","TTCCTGCTGACGAGTT",10,172.85,9.34,-1.5,0.07,2.77,1.07,0,">1 nonsynonymous","C6S C31L K114R G155D",4
"lib2","SARS-CoV-2","TTCCTGGACTCATTCT",16,7.02,NA,NA,NA,NA,NA,NA,"stop","N4* A14I G86Y R136D",4
"lib2","SARS-CoV-2","TTCCTGGGTGGAACAG",2,37.75,8.67,-2.16,0.11,3,1.06,0.01,">1 nonsynonymous","I142G T201M",2
"lib2","SARS-CoV-2","TTCCTTAAGCGGAACC",2,30.77,10.82,-0.02,0.1,2.87,1.11,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","TTCCTTACACATATGA",4,82.02,8.92,-1.92,0.08,2.89,1.07,0,">1 nonsynonymous","I2K T15Q V37N Y119A P149S S200M",6
"lib2","SARS-CoV-2","TTCCTTACCTAAACAG",1,16.72,10.62,-0.22,0.09,2.89,1.12,0,"1 nonsynonymous","F44D",1
"lib2","SARS-CoV-2","TTCCTTACTCTGGACC",10,202.94,10.22,-0.62,0.04,2.84,1.02,0,">1 nonsynonymous","G9L K128F",2
"lib2","SARS-CoV-2","TTCCTTAGAAAAAAAG",1,48.17,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","T3P I80S Y165A",3
"lib2","SARS-CoV-2","TTCCTTAGCCAAATAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S45I G166*",2
"lib2","SARS-CoV-2","TTCCTTAGCGGAGTTA",1,41.61,10.8,-0.04,0.04,3,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCCTTAGGTGAAAAG",3,66.03,10.79,-0.04,0.09,2.68,1.08,0,"1 nonsynonymous","T201M",1
"lib2","SARS-CoV-2","TTCCTTCAGTAAACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37G F44T D90S D137P",4
"lib2","SARS-CoV-2","TTCCTTCAGTCTATCC",2,49.81,10.76,-0.08,0.08,2.92,1.1,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","TTCCTTCCAGGCGAAA",6,3.89,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V11A T15I",2
"lib2","SARS-CoV-2","TTCCTTCCATGTGTGA",4,36.96,6.16,-4.67,0.94,1.5,1.21,0.03,">1 nonsynonymous","S69P G86V",2
"lib2","SARS-CoV-2","TTCCTTCCTTGTTTTT",12,86.78,10.29,-0.55,0.06,2.82,1.09,0,"1 nonsynonymous","K48F",1
"lib2","SARS-CoV-2","TTCCTTCTTAATTGAA",3,15.6,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N1W N24R Y50T P161S T201W",5
"lib2","SARS-CoV-2","TTCCTTCTTAGTCTTC",7,45.68,6,-4.84,0.87,3,1.15,0.01,">1 nonsynonymous","A14K F99G S113F R124A Q144R N157D",6
"lib2","SARS-CoV-2","TTCCTTGCGGCACAGA",1,23.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95P W106E D137E",3
"lib2","SARS-CoV-2","TTCCTTGGGCTAAATA",3,75.68,10.19,-0.65,0.05,2.85,1.05,0,">1 nonsynonymous","V37I P169L V173E",3
"lib2","SARS-CoV-2","TTCCTTGTGATGATTG",1,19.64,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","V20M S36K P82R W106N S147T V173G T201A",7
"lib2","SARS-CoV-2","TTCCTTTAAAAGGTTA",1,0,NA,NA,NA,NA,NA,NA,"stop","C6* F44R",2
"lib2","SARS-CoV-2","TTCCTTTCCCCTAAAC",7,107.04,10.68,-0.16,0.03,2.9,1.09,0,">1 nonsynonymous","T3I N171Q",2
"lib2","SARS-CoV-2","TTCCTTTCTCAGGCCG",17,333.11,10.8,-0.03,0.04,2.93,1.08,0,">1 nonsynonymous","V37I P197W",2
"lib2","SARS-CoV-2","TTCCTTTTACAAACAA",1,30.75,10.84,0.01,0.05,2.99,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGAAAAAAGAAAAT",9,68,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","A14G D75G N157P",3
"lib2","SARS-CoV-2","TTCGAAAAACTGTAAG",9,160.49,10.02,-0.81,0.04,2.83,1.02,0,">1 nonsynonymous","S36G G116Q N151V",3
"lib2","SARS-CoV-2","TTCGAAAACAAAATAT",6,141.89,10.4,-0.43,0.03,2.95,1.06,0,">1 nonsynonymous","T55G G174M",2
"lib2","SARS-CoV-2","TTCGAAACTAGAGCCA",1,8.63,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","Y50M N58T N64R D90N N118S T170L G174P V181A",8
"lib2","SARS-CoV-2","TTCGAAACTAGCAAAA",4,79.02,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I2D L95E P169R",3
"lib2","SARS-CoV-2","TTCGAAATAAAAACTG",2,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTCGAAATTTGCTCAA",1,9.4,6.44,-4.4,0.44,1.5,1.1,0.02,">1 nonsynonymous","P7L S41D K48E N64L L122T S129A F167W",7
"lib2","SARS-CoV-2","TTCGAACAAGCAAAGT",4,9.52,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","C6G L95R E141L",3
"lib2","SARS-CoV-2","TTCGAACAAGTGTAAC",7,0.03,NA,NA,NA,NA,NA,NA,"stop","C49* N92W",2
"lib2","SARS-CoV-2","TTCGAACACCGGAGAC",3,8.92,10.4,-0.44,0.12,2.84,1.04,0,">1 nonsynonymous","D98Y S139D",2
"lib2","SARS-CoV-2","TTCGAACGAATATAGA",7,79.72,10.42,-0.42,0.05,2.81,1.03,0,">1 nonsynonymous","T100D Y123K",2
"lib2","SARS-CoV-2","TTCGAACGCCCACTAC",6,217.45,10.27,-0.56,0.03,2.87,1.03,0,">1 nonsynonymous","R27G N120R",2
"lib2","SARS-CoV-2","TTCGAACGGTGGGATA",5,0,NA,NA,NA,NA,NA,NA,"stop","L5Y Y35* D68R",3
"lib2","SARS-CoV-2","TTCGAACGTGATTTTA",14,89.27,6.56,-4.28,0.42,1.5,1.17,0.02,">1 nonsynonymous","L5N E10K V181E",3
"lib2","SARS-CoV-2","TTCGAACGTGCTTTCC",5,25.9,10.32,-0.51,0.11,2.75,1.03,0.01,">1 nonsynonymous","Y35G L122W",2
"lib2","SARS-CoV-2","TTCGAAGAAGATCAGT",10,204.68,9.52,-1.32,0.03,2.93,1.08,0,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","TTCGAAGAGGGTTAAG",4,154.83,10.43,-0.41,0.03,2.91,1.08,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TTCGAAGATCACATCT",2,0.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91V I104P N110M",3
"lib2","SARS-CoV-2","TTCGAAGCATGTGCGG",1,7.81,9,-1.84,0.12,2.88,1,0,"1 nonsynonymous","G146V",1
"lib2","SARS-CoV-2","TTCGAAGCGAAAACGT",1,1.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10D G86L T201C",3
"lib2","SARS-CoV-2","TTCGAAGCTTTCTAGC",8,120.87,8.7,-2.14,0.07,2.94,1.08,0,"1 nonsynonymous","Y159L",1
"lib2","SARS-CoV-2","TTCGAAGGTCCCACAC",2,15.29,7.21,-3.62,0.19,1.8,1.11,0.01,">1 nonsynonymous","A105I Y119F S129I K198R",4
"lib2","SARS-CoV-2","TTCGAAGTCCGGTGCT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","F44* Q144L P149K",3
"lib2","SARS-CoV-2","TTCGAAGTTACGGTAC",8,24.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y93P W106R A145R P149R",4
"lib2","SARS-CoV-2","TTCGAATAATGCCTGA",7,77.9,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36V S41E R73E G116D Q168P",5
"lib2","SARS-CoV-2","TTCGAATAATGTGAAT",1,13.38,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","V20A K26I D112R",3
"lib2","SARS-CoV-2","TTCGAATAGCCAAGTA",3,74.6,9.32,-1.51,0.08,2.67,1.07,0,">1 nonsynonymous","F12L P133G F156L",3
"lib2","SARS-CoV-2","TTCGAATCAGAGACTG",2,32.56,7.41,-3.43,0.19,1.55,1.05,0.01,">1 nonsynonymous","G86M G174L",2
"lib2","SARS-CoV-2","TTCGAATCATAACTCG",16,58.57,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","W23S K94N V103K S113G E141K",5
"lib2","SARS-CoV-2","TTCGAATGAAGCGAAA",8,259.39,9.26,-1.57,0.08,2.48,1.08,0,">1 nonsynonymous","G83D T85S I142W K199Y",4
"lib2","SARS-CoV-2","TTCGAATTAATTTCCC",12,7.42,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P96S I104K Q168S",3
"lib2","SARS-CoV-2","TTCGAATTTGCCTAAA",7,33.72,9.97,-0.86,0.1,2.26,1,0.01,">1 nonsynonymous","N1V F47H T201L",3
"lib2","SARS-CoV-2","TTCGACAAAGTCGATG",5,0.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L F62V T201L",3
"lib2","SARS-CoV-2","TTCGACAAATACTGAA",3,34.82,10.75,-0.08,0.1,2.85,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGACAAATATACCA",1,15.98,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","P7L Q84F T100S K128F",4
"lib2","SARS-CoV-2","TTCGACAACCTTCGGC",1,4.34,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39A G86N P96T S113L N120V Y175L",6
"lib2","SARS-CoV-2","TTCGACAATGTCATTT",4,189.25,10.1,-0.73,0.05,2.91,1.05,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","TTCGACACGTAGCTTA",16,178.46,9.19,-1.64,0.12,1.5,1.08,0.01,">1 nonsynonymous","Y50T I138Q T148S",3
"lib2","SARS-CoV-2","TTCGACATAAAGACCG",14,133.61,8.69,-2.14,0.1,1.9,1.08,0,">1 nonsynonymous","C61L N107T",2
"lib2","SARS-CoV-2","TTCGACCATAAGAAGG",4,74,9.89,-0.94,0.06,2.67,1.03,0,">1 nonsynonymous","Y35P L57C",2
"lib2","SARS-CoV-2","TTCGACCGTTTAGATG",14,120.11,10.29,-0.54,0.06,2.76,1.08,0,">1 nonsynonymous","N1S L38W N151Y F160R",4
"lib2","SARS-CoV-2","TTCGACCTGAAAACCA",4,134.58,10.31,-0.53,0.03,2.88,1.03,0,">1 nonsynonymous","S45K D97R",2
"lib2","SARS-CoV-2","TTCGACCTGCAAATAG",3,14.91,6.73,-4.11,0.27,2.31,1.05,0.03,">1 nonsynonymous","F12H W23R S129E T170L V180R H189P",6
"lib2","SARS-CoV-2","TTCGACGATGTAAACA",2,19.48,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","I72P F134L",2
"lib2","SARS-CoV-2","TTCGACGCCGGGTGCA",5,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G83F K87Y P96R D137E E141L",5
"lib2","SARS-CoV-2","TTCGACGGCCTCCGAA",3,14.69,9.31,-1.52,0.32,1.67,1.04,0.06,">1 nonsynonymous","A14D S45H T85L Q163T",4
"lib2","SARS-CoV-2","TTCGACGTATGTTCGA",8,18.59,7.39,-3.44,0.29,1.5,1.2,0.03,">1 nonsynonymous","V11N I80G F99S L122G F185Q",5
"lib2","SARS-CoV-2","TTCGACTAGAACGGGG",2,0,NA,NA,NA,NA,NA,NA,"stop","N120F G146* V181M",3
"lib2","SARS-CoV-2","TTCGACTGAACACTTT",1,3.03,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103K I138T F156A",3
"lib2","SARS-CoV-2","TTCGACTTATGACTAT",4,42.11,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","L5K E76K D90M Y121G",4
"lib2","SARS-CoV-2","TTCGACTTATTCTAAG",8,37.57,6.53,-4.31,0.38,1.5,1.11,0.01,">1 nonsynonymous","C6H K26N K48E L95M N171H",5
"lib2","SARS-CoV-2","TTCGACTTTGAGTAAC",10,99.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C102K N120P",2
"lib2","SARS-CoV-2","TTCGACTTTTGCTAAC",4,11.66,7.04,-3.79,0.2,2.33,1,0.01,">1 nonsynonymous","V103N N130A S200T",3
"lib2","SARS-CoV-2","TTCGAGAAATTAGGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","Y50* C61P",2
"lib2","SARS-CoV-2","TTCGAGAACCCCTCAA",2,25.51,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","T55E D68C K94D K128H T148Y G155C Y165R",7
"lib2","SARS-CoV-2","TTCGAGAAGTATTCAA",1,17.27,9.77,-1.06,0.16,2.37,1,0.01,">1 nonsynonymous","D34A L60A E141G",3
"lib2","SARS-CoV-2","TTCGAGACCGGTGCAT",2,33.36,6,-4.84,2,1.5,1.23,0.03,"1 nonsynonymous","Y93V",1
"lib2","SARS-CoV-2","TTCGAGAGTCAGGACC",1,9.24,7.79,-3.05,0.27,1.88,1.03,0.02,">1 nonsynonymous","T100C R179V",2
"lib2","SARS-CoV-2","TTCGAGCACACTTAAA",4,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34T V71K W106M S113C",4
"lib2","SARS-CoV-2","TTCGAGCATAAGCCCA",11,24.52,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36F C49Y N64A K114S G174K",5
"lib2","SARS-CoV-2","TTCGAGCCATGCAGTG",9,107.57,9.67,-1.16,0.07,2.34,1.05,0,"1 nonsynonymous","Y91T",1
"lib2","SARS-CoV-2","TTCGAGCCTACCAGCG",13,4.21,NA,NA,NA,NA,NA,NA,"stop","L5A S69* E141Y F160L",4
"lib2","SARS-CoV-2","TTCGAGGACGAACCCC",2,11.63,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","Y21R C61I D97A P149I",4
"lib2","SARS-CoV-2","TTCGAGTCACGACTAA",6,43.99,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K87S W106S K114N V115S R136L",5
"lib2","SARS-CoV-2","TTCGAGTCCCGCTTTA",1,17.07,6,-4.84,2,3,1.07,0.02,">1 nonsynonymous","I28L V103R G166S Y178N",4
"lib2","SARS-CoV-2","TTCGAGTTCCATAGAG",12,75.7,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N4M Y50H V77L R136P L188P",5
"lib2","SARS-CoV-2","TTCGATAAATAAAGTA",3,53.16,10.63,-0.21,0.04,3,1.01,0,"1 nonsynonymous","P7L",1
"lib2","SARS-CoV-2","TTCGATAAATTTCATA",9,84.04,7.71,-3.13,0.32,1.5,1.12,0.03,">1 nonsynonymous","Y50A T85K T100L",3
"lib2","SARS-CoV-2","TTCGATAATACAGGAA",3,35.69,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","I28L Y93H P133N N157P",4
"lib2","SARS-CoV-2","TTCGATACCACGTATG",12,179.66,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V37C Y175P",2
"lib2","SARS-CoV-2","TTCGATACCCGTGCCG",1,0.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88M V173W",2
"lib2","SARS-CoV-2","TTCGATACGATTACAT",2,75.15,10.24,-0.6,0.05,2.88,1,0,">1 nonsynonymous","F44S P54S",2
"lib2","SARS-CoV-2","TTCGATACTCGTACGG",4,10.09,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A42L C61D V77S G116V V182G",5
"lib2","SARS-CoV-2","TTCGATATACGAATTC",6,90.96,10.65,-0.18,0.05,2.89,1.13,0,"1 nonsynonymous","R78W",1
"lib2","SARS-CoV-2","TTCGATATGCATTAAC",1,0.27,NA,NA,NA,NA,NA,NA,"stop","Y50I K56*",2
"lib2","SARS-CoV-2","TTCGATATTGTTGACT",3,45.47,8.24,-2.59,0.11,1.96,1.09,0,">1 nonsynonymous","Y91H Y159L",2
"lib2","SARS-CoV-2","TTCGATATTTTCAGCA",5,23.8,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","Y50P D59L K94R T100I Y119I N151S",6
"lib2","SARS-CoV-2","TTCGATCCAATCTTCT",2,10.59,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","L5K F12T V180H",3
"lib2","SARS-CoV-2","TTCGATCCACTAAGGC",15,229.37,9.9,-0.94,0.06,2.14,1.05,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TTCGATCGAGCCCTAG",13,87.45,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","T3F R25G C49Q Y91S F167D S184G",6
"lib2","SARS-CoV-2","TTCGATCGCCGAACCT",4,8.01,6,-4.84,1.49,3,1,0,">1 nonsynonymous","F44R G51Y",2
"lib2","SARS-CoV-2","TTCGATGAAAACCCTG",3,69.57,9,-1.84,0.11,2.8,1.14,0,">1 nonsynonymous","E10D K48E F62L S147V Q168V",5
"lib2","SARS-CoV-2","TTCGATGAACATGTGA",7,164.43,10.64,-0.2,0.03,2.91,1.09,0,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","TTCGATGACCCAGTGG",10,80.23,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","L57V G101A",2
"lib2","SARS-CoV-2","TTCGATGCAAATCTTT",9,20.23,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","N1P N30M D59I V103S Q144L P161D",6
"lib2","SARS-CoV-2","TTCGATGGATGGAGTC",9,13.19,6,-4.84,1.36,1.5,1.09,0.02,">1 nonsynonymous","D90E I104Q S129G",3
"lib2","SARS-CoV-2","TTCGATGGCTTAAACA",14,199.57,10.82,-0.01,0.05,2.83,1.11,0,">1 nonsynonymous","A42D K56N",2
"lib2","SARS-CoV-2","TTCGATTGTTTTAATA",1,10.98,10.89,0.06,0.15,2.94,1.08,0.01,">1 nonsynonymous","A89S L122Q",2
"lib2","SARS-CoV-2","TTCGCAACGGATGTTA",22,317.98,9.99,-0.85,0.03,2.86,1.03,0,">1 nonsynonymous","N13G K87I D98L",3
"lib2","SARS-CoV-2","TTCGCAACTTTTCTGA",5,108.46,10.26,-0.57,0.03,2.87,1.01,0,"1 nonsynonymous","Y91K",1
"lib2","SARS-CoV-2","TTCGCAATATCAGTTT",7,21.41,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","L5V S36C V37L A42E P96E S139G",6
"lib2","SARS-CoV-2","TTCGCACCCACATAAT",7,53.77,8.71,-2.13,0.2,1.5,1.18,0.02,">1 nonsynonymous","P54E P133T F167Y T201P",4
"lib2","SARS-CoV-2","TTCGCACCGTTAACTT",1,4.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97Y V103R R136I",3
"lib2","SARS-CoV-2","TTCGCACGTACAGGTG",10,60.08,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60A L95S D112V",3
"lib2","SARS-CoV-2","TTCGCAGTACCAAGCC",2,4.68,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14L D68R",2
"lib2","SARS-CoV-2","TTCGCATACATATGAT",6,48.37,10.59,-0.24,0.06,2.93,1.02,0,">1 nonsynonymous","Y35S Q168F",2
"lib2","SARS-CoV-2","TTCGCATACCATTACA",6,176.23,8.97,-1.87,0.03,2.9,1.11,0,">1 nonsynonymous","G83Y G166R",2
"lib2","SARS-CoV-2","TTCGCATATTAAAGGA",7,0.94,NA,NA,NA,NA,NA,NA,"stop","L5T L60T S147A Y159*",4
"lib2","SARS-CoV-2","TTCGCATGTGATAATG",1,2.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1I L38S D59V A105K F185K T201S",6
"lib2","SARS-CoV-2","TTCGCCAGTTAAACAC",1,89.42,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","Y123I F134L G152T Q176E",4
"lib2","SARS-CoV-2","TTCGCCATACAATACG",3,20.74,10.82,-0.01,0.1,2.97,1.04,0,"1 nonsynonymous","S129A",1
"lib2","SARS-CoV-2","TTCGCCATCGCGAAAG",17,188.68,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3L F44E N107L",3
"lib2","SARS-CoV-2","TTCGCCATTCGACCTT",7,28.75,6,-4.84,2,3,1.14,0,">1 nonsynonymous","Y165S N171A G174R",3
"lib2","SARS-CoV-2","TTCGCCCCAGACGGAG",2,11.18,10.95,0.12,0.08,2.86,1.17,0,"1 nonsynonymous","K48R",1
"lib2","SARS-CoV-2","TTCGCCCCGTATCTAT",6,79.65,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I2H V37G K56G V77N Q84L T201C",6
"lib2","SARS-CoV-2","TTCGCCCGAGACACAG",6,55.01,6,-4.84,2,2.37,1.09,0,">1 nonsynonymous","F8R V37L P161H F167A",4
"lib2","SARS-CoV-2","TTCGCCCTAAAGAAAC",5,23.13,9.17,-1.67,0.13,2.59,1.23,0.01,">1 nonsynonymous","Y91K T100I Y119T",3
"lib2","SARS-CoV-2","TTCGCCTACCTTTAGC",3,8.45,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N58H I104N",2
"lib2","SARS-CoV-2","TTCGCCTCCGACGAAC",2,17.27,10.16,-0.68,0.13,2.72,1.11,0.01,">1 nonsynonymous","T46N K56L R78C",3
"lib2","SARS-CoV-2","TTCGCGAAAAAGGAAG",1,13.85,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N40K Y50N Y143W",3
"lib2","SARS-CoV-2","TTCGCGAAATATCCGG",6,79.49,10.82,-0.02,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGCGAAATTAAGAA",3,8.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90Y D97S T170L",3
"lib2","SARS-CoV-2","TTCGCGAGAAATACAA",6,39.75,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","G9M I80W Q84L T201N",4
"lib2","SARS-CoV-2","TTCGCGAGAGAGTACC",26,179.74,8.35,-2.49,0.05,1.93,1.11,0,">1 nonsynonymous","E154N P161V",2
"lib2","SARS-CoV-2","TTCGCGCAAAGAACTT",5,44.14,10.6,-0.24,0.08,2.85,1.08,0,">1 nonsynonymous","D90L K199Q",2
"lib2","SARS-CoV-2","TTCGCGCGACAGCTTG",11,114.19,10.88,0.04,0.06,2.91,1.12,0,">1 nonsynonymous","L5P R16T N151H",3
"lib2","SARS-CoV-2","TTCGCGCGAGAACCTA",2,7.58,7.42,-3.41,0.29,1.5,1.05,0.03,">1 nonsynonymous","S19Y F44V S147P",3
"lib2","SARS-CoV-2","TTCGCGCGCAAGAAAA",2,66.92,10.12,-0.71,0.07,2.62,1.02,0,"1 nonsynonymous","V71A",1
"lib2","SARS-CoV-2","TTCGCGTGTTGAGAGA",4,72.29,10.78,-0.06,0.04,2.82,1.19,0,">1 nonsynonymous","P149H P197S",2
"lib2","SARS-CoV-2","TTCGCGTTCCAAAATA",2,40.89,10.95,0.11,0.04,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGCTAAAAGCTCCC",2,15.71,10.52,-0.31,0.07,2.92,1.09,0,"1 nonsynonymous","E141S",1
"lib2","SARS-CoV-2","TTCGCTAAATAGATCG",2,42.66,9.41,-1.42,0.07,2.52,1.07,0,">1 nonsynonymous","A14C G116S G196W",3
"lib2","SARS-CoV-2","TTCGCTAAATCCTGTG",2,50.12,10.74,-0.1,0.03,2.95,1.02,0,">1 nonsynonymous","A33Y K56L Y178S",3
"lib2","SARS-CoV-2","TTCGCTAATAATGTAC",1,25.34,10.19,-0.65,0.1,2.56,1.01,0.01,">1 nonsynonymous","T55S E135L T201V",3
"lib2","SARS-CoV-2","TTCGCTACTATTCCAT",5,59.6,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","F70K A105S",2
"lib2","SARS-CoV-2","TTCGCTATGGCACGGT",10,156.13,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","E10L S108P K198V",3
"lib2","SARS-CoV-2","TTCGCTCTTTGCAATG",4,20.18,9.68,-1.16,0.13,1.98,1,0.01,">1 nonsynonymous","D59R A81L",2
"lib2","SARS-CoV-2","TTCGCTTTGAATTATA",1,27.38,10.87,0.03,0.07,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGAAAGATAGAAA",2,8.62,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G83V I88P K128L",3
"lib2","SARS-CoV-2","TTCGGAAAGGGAACCT",1,2.94,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G116R",1
"lib2","SARS-CoV-2","TTCGGAACGAAACCGG",6,94.2,10.04,-0.8,0.07,2.64,1.11,0,">1 nonsynonymous","D34S T85E",2
"lib2","SARS-CoV-2","TTCGGACACGCTCATC",2,51.97,6,-4.84,2,3,1.11,0,">1 nonsynonymous","F62R D68N I138N C150I",4
"lib2","SARS-CoV-2","TTCGGACTAATAGTAT",3,39.37,10.62,-0.22,0.05,2.9,1.11,0,"1 nonsynonymous","E141R",1
"lib2","SARS-CoV-2","TTCGGAGGGATGCTCT",7,63.07,6.07,-4.76,0.33,1.5,1.09,0,">1 nonsynonymous","A14L D98C N120P",3
"lib2","SARS-CoV-2","TTCGGAGTAATGTTCG",9,108.96,9.03,-1.8,0.05,2.92,1.12,0,"1 nonsynonymous","G117C",1
"lib2","SARS-CoV-2","TTCGGAGTCTCCCCAT",11,125.35,10.74,-0.09,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGAGTTAGAAAGA",2,15.54,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","T3P D68E Y119P N151V G166F",5
"lib2","SARS-CoV-2","TTCGGATCATCCGCTA",21,6714.81,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P7S F44R T85S L162P P169I",5
"lib2","SARS-CoV-2","TTCGGATCTAAACCAT",3,49.24,10.99,0.15,0.06,2.93,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGCAAATTGATGT",2,0.2,NA,NA,NA,NA,NA,NA,"stop","S41A T46* G152Q C158Q",4
"lib2","SARS-CoV-2","TTCGGCACTAACACAT",8,39.97,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","F12Y S36R D112W G152N C158Y",5
"lib2","SARS-CoV-2","TTCGGCATATATTCGC",1,26.48,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","G86N Y119W L131A P161C G174M",5
"lib2","SARS-CoV-2","TTCGGCCAATACCAAA",9,120.95,10.32,-0.52,0.05,2.86,1.01,0,">1 nonsynonymous","T3L V37G Q144H",3
"lib2","SARS-CoV-2","TTCGGCCTCGGGATAG",3,62.8,10.72,-0.11,0.08,2.89,1.14,0,"1 nonsynonymous","S129M",1
"lib2","SARS-CoV-2","TTCGGCGTCACGAAAT",5,52.36,7.59,-3.25,0.16,1.7,1.08,0.01,">1 nonsynonymous","N107R F126R T201D",3
"lib2","SARS-CoV-2","TTCGGCTACACTCTCG",2,69.39,10.8,-0.04,0.06,2.92,1.08,0,"1 nonsynonymous","A42K",1
"lib2","SARS-CoV-2","TTCGGGAAACGTATAT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","G51F A89* D97R H189Y",4
"lib2","SARS-CoV-2","TTCGGGACAAGTTACA",4,57.73,10.67,-0.17,0.03,2.93,1.08,0,"1 nonsynonymous","D59F",1
"lib2","SARS-CoV-2","TTCGGGACACTCTATA",10,17.07,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","C49F D90P T100A P149M T201I",5
"lib2","SARS-CoV-2","TTCGGGAGCTCATCAA",3,7.82,NA,NA,NA,NA,NA,0.2,">1 nonsynonymous","V20R P149F",2
"lib2","SARS-CoV-2","TTCGGGATATGGGCCT",3,75.31,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","N40T G86R F167R Y178M",4
"lib2","SARS-CoV-2","TTCGGGCCCACCATCG",2,17.69,6,-4.84,2,3,1.02,0,">1 nonsynonymous","S69W F99K P149I G155I",4
"lib2","SARS-CoV-2","TTCGGGCCCCCCACTA",3,25.35,10.79,-0.05,0.07,3,1.04,0,">1 nonsynonymous","V32C G51N",2
"lib2","SARS-CoV-2","TTCGGGCGCAAAGGAT",1,6.24,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","F12A F99P A190E T201A",4
"lib2","SARS-CoV-2","TTCGGGGAAAAAAATC",1,69.05,10.71,-0.13,0.03,2.99,1.01,0,">1 nonsynonymous","L5I S45A K128N",3
"lib2","SARS-CoV-2","TTCGGGGAATCTAGCG",2,18.92,10.73,-0.11,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGGGTTACTGGTA",1,11.82,9.76,-1.08,0.13,2.65,1.01,0.01,">1 nonsynonymous","Y91H V173C",2
"lib2","SARS-CoV-2","TTCGGGTCGACACTCT",15,1.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35L L95S W106R E141T",4
"lib2","SARS-CoV-2","TTCGGTAAATGACACA",14,47.36,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A18V L60K I88W E141R Q168P",5
"lib2","SARS-CoV-2","TTCGGTATACAAGGGA",6,0.1,NA,NA,NA,NA,NA,NA,"stop","K94* F126S",2
"lib2","SARS-CoV-2","TTCGGTATGGCCATGG",3,0.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M K94N S129V L183T",4
"lib2","SARS-CoV-2","TTCGGTATTTACCTAT",5,31.66,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T170M R179M",2
"lib2","SARS-CoV-2","TTCGGTCACTAGTATC",5,82.16,6,-4.84,1.15,1.5,1.15,0.02,">1 nonsynonymous","I28T Y39L V77A K114V C150N",5
"lib2","SARS-CoV-2","TTCGGTCCCTTGTTGA",4,46.25,10.66,-0.18,0.07,2.75,1.25,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGTCTCAACTGAA",5,116.97,10.86,0.03,0.05,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGGTGATGTCGAGT",3,78.4,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","I28T Y50A A67S V173A",4
"lib2","SARS-CoV-2","TTCGGTGCTGTGATGA",3,10.09,6,-4.84,2,1.5,1.08,0.02,">1 nonsynonymous","C61D P96S I104D D137C A192S",5
"lib2","SARS-CoV-2","TTCGGTGCTTCCAACT",4,50.01,10.13,-0.71,0.06,2.97,1.03,0,">1 nonsynonymous","C6V Y35W D90E",3
"lib2","SARS-CoV-2","TTCGGTGTCAACAACC",1,12.36,9.64,-1.2,0.29,1.78,1,0.04,">1 nonsynonymous","V37F N58L P82S",3
"lib2","SARS-CoV-2","TTCGGTTATACTTCTA",2,16.17,6.31,-4.53,0.8,1.5,1.15,0.04,">1 nonsynonymous","G9T C31T D59M A89F A105G",5
"lib2","SARS-CoV-2","TTCGGTTATCTTAGTT",7,72.42,10.75,-0.09,0.04,2.93,1.08,0,"1 nonsynonymous","V173W",1
"lib2","SARS-CoV-2","TTCGTAAAAAGAAATA",4,26.18,8.5,-2.34,0.14,1.61,1.1,0.01,">1 nonsynonymous","A14I K94C T148V",3
"lib2","SARS-CoV-2","TTCGTAAAACTGCTAA",21,2.32,NA,NA,NA,NA,NA,NA,"stop","N13L S53*",2
"lib2","SARS-CoV-2","TTCGTAAACAAATTAG",9,115.07,10.83,-0.01,0.04,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGTAAACTCGCTCG",12,53.8,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","G116K F126M P149Q G174A V182K S200D",6
"lib2","SARS-CoV-2","TTCGTAAAGGGTCAGT",25,319.05,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","I28A Y35S S43R D68A V103L F167L",6
"lib2","SARS-CoV-2","TTCGTAAGCATTCTTC",1,13.17,10.9,0.06,0.14,2.81,1.21,0.01,">1 nonsynonymous","E141Q K199F",2
"lib2","SARS-CoV-2","TTCGTAATTAACGTCT",2,47.94,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N58A G174K R179L",3
"lib2","SARS-CoV-2","TTCGTAATTGCTATTA",3,10.61,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A33G D112T G146M V182F K199I",5
"lib2","SARS-CoV-2","TTCGTACAGTTTGCCG",3,43.08,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","P7R C31L L38T A105C Y123E E141S Y175G L183A",8
"lib2","SARS-CoV-2","TTCGTACCCTTCCTCA",2,48.87,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S29A N107F",2
"lib2","SARS-CoV-2","TTCGTACTGCTTTACA",2,36.16,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","C6S P177F",2
"lib2","SARS-CoV-2","TTCGTACTTCTTCCGA",2,20.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45V Y93Q N107P K128S",4
"lib2","SARS-CoV-2","TTCGTAGTATTCATCC",4,62.78,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99S F134K",2
"lib2","SARS-CoV-2","TTCGTATTATGGTCTA",2,17.46,6.41,-4.43,0.45,2,1.07,0.04,">1 nonsynonymous","D34V V52D K56F I104E R136S",5
"lib2","SARS-CoV-2","TTCGTATTGTCTTATA",15,7.48,NA,NA,NA,NA,NA,NA,"stop","C61L Y91M F99* P177N",4
"lib2","SARS-CoV-2","TTCGTCAAAGGCTACG",2,64.21,10.82,-0.02,0.06,2.93,1.08,0,">1 nonsynonymous","S36K D98S L122R K128G P197R",5
"lib2","SARS-CoV-2","TTCGTCAAATATCTCC",1,22.34,10.12,-0.72,0.06,2.88,1.13,0,">1 nonsynonymous","L60R E154C",2
"lib2","SARS-CoV-2","TTCGTCAAGTCTTTAT",6,127.31,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5N C31Q K48E I88N V181T",5
"lib2","SARS-CoV-2","TTCGTCACACCGCACC",1,15.43,10.05,-0.78,0.19,2.79,1.08,0.01,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","TTCGTCACCAATCTTG",5,23.25,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","D90S T100G N107S I138N P191N S200F",6
"lib2","SARS-CoV-2","TTCGTCATTAAAAAAA",10,71.81,9.64,-1.2,0.06,2.02,1.07,0,">1 nonsynonymous","E10V A18C Y39R T46V",4
"lib2","SARS-CoV-2","TTCGTCCAAGAGACTG",1,29.82,10.85,0.01,0.04,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGTCCAGGTATATA",3,49.58,10.79,-0.04,0.06,2.98,1.03,0,">1 nonsynonymous","I2L P149V",2
"lib2","SARS-CoV-2","TTCGTCGACACGCTTT",16,3.57,NA,NA,NA,NA,NA,NA,"stop","V77G N92L Q176*",3
"lib2","SARS-CoV-2","TTCGTCGCCTACTTCC",9,126,10.57,-0.27,0.06,2.84,1.12,0,"1 nonsynonymous","I2C",1
"lib2","SARS-CoV-2","TTCGTCTCTAAATCGC",5,68.33,10.75,-0.08,0.06,2.94,1.07,0,"1 nonsynonymous","S43P",1
"lib2","SARS-CoV-2","TTCGTGCCATCAGCAA",2,19.43,8.49,-2.34,0.29,1.93,1.25,0.04,">1 nonsynonymous","C31L Y121M K198N",3
"lib2","SARS-CoV-2","TTCGTGCTTCCCTACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3H K94T N151Y",3
"lib2","SARS-CoV-2","TTCGTGGTACGAACTA",2,0,NA,NA,NA,NA,NA,NA,"stop","V103* D112R S184I",3
"lib2","SARS-CoV-2","TTCGTTAACCGTTATA",2,118.93,10.24,-0.6,0.04,2.84,1.02,0,"1 nonsynonymous","Y50H",1
"lib2","SARS-CoV-2","TTCGTTAAGGCGATGT",2,29.22,10.79,-0.05,0.06,2.78,1.22,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGTTAATGTATTAG",1,19.8,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","N24T A89H S108P P169W",4
"lib2","SARS-CoV-2","TTCGTTAATTTTAAAG",1,3.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4Y W106F",2
"lib2","SARS-CoV-2","TTCGTTAGAAATGTAA",10,141.02,10.85,0.02,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCGTTAGAATAGACA",2,11.77,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","K26R R179L",2
"lib2","SARS-CoV-2","TTCGTTAGAATGACCG",6,81.83,10.25,-0.59,0.03,2.82,1.02,0,">1 nonsynonymous","N24A D59M R73K",3
"lib2","SARS-CoV-2","TTCGTTATTAACCCCA",1,2.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106D Y121I",2
"lib2","SARS-CoV-2","TTCGTTCTCGCCCAGC",3,20.8,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S36Y C49F N92S F167V P197R",5
"lib2","SARS-CoV-2","TTCGTTGACCGCGTAT",1,31.08,7.22,-3.61,0.41,1.5,1.07,0.06,">1 nonsynonymous","W23D T100F Y121S F134Y",4
"lib2","SARS-CoV-2","TTCGTTGACGCCGAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1* F99Y Y159G T201M",4
"lib2","SARS-CoV-2","TTCGTTGACTTATGAT",4,43.94,10.87,0.04,0.06,2.95,1.07,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCGTTGGTCAACGGA",1,79.88,10.25,-0.59,0.06,2.84,1,0,">1 nonsynonymous","N40L C61S L131V",3
"lib2","SARS-CoV-2","TTCGTTTCTTTAAAAA",2,31.3,8.95,-1.89,0.13,2.05,1.04,0.01,">1 nonsynonymous","F12W L38F N118A",3
"lib2","SARS-CoV-2","TTCGTTTGCGTAGTTA",11,129.77,10.73,-0.1,0.04,2.96,1.07,0,">1 nonsynonymous","V37H C61K",2
"lib2","SARS-CoV-2","TTCGTTTGGCATGCGC",3,51.28,10.84,0.01,0.09,2.76,1.17,0,">1 nonsynonymous","G152S S200L",2
"lib2","SARS-CoV-2","TTCTAAAAAATCATGT",4,60.58,9.12,-1.72,0.1,2.08,1.15,0,">1 nonsynonymous","S36K Y121S I138C",3
"lib2","SARS-CoV-2","TTCTAAAAACCAGGGC",2,28.32,7.5,-3.33,0.31,1.57,1.14,0.03,">1 nonsynonymous","G152D Y165S",2
"lib2","SARS-CoV-2","TTCTAAAACACTCCTA",1,0.55,NA,NA,NA,NA,NA,NA,"stop","A22P C31K D98* P149T Y159R",5
"lib2","SARS-CoV-2","TTCTAAAAGAGAATTA",6,116.39,10.82,-0.02,0.04,2.97,1.04,0,"1 nonsynonymous","T148L",1
"lib2","SARS-CoV-2","TTCTAAAATGAAATAT",5,12.49,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6L S41T T63F I88K",4
"lib2","SARS-CoV-2","TTCTAAACAAATGATT",4,0.19,NA,NA,NA,NA,NA,NA,"stop","K56* K87I D112M N118S T170Q",5
"lib2","SARS-CoV-2","TTCTAAACACTCAAAC",4,21.21,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F8S E10D Y143I L183T",4
"lib2","SARS-CoV-2","TTCTAAACGTGTTTAC",3,158.24,10.47,-0.37,0.03,2.96,1.03,0,">1 nonsynonymous","L125I R136L",2
"lib2","SARS-CoV-2","TTCTAAAGCCTGCGCG",2,31.8,10.82,-0.01,0.05,2.88,1.12,0,"1 nonsynonymous","S129E",1
"lib2","SARS-CoV-2","TTCTAAATATAACGCT",3,0.02,NA,NA,NA,NA,NA,NA,"stop","S29H F47* V103G E135V E141K L183R P197C",7
"lib2","SARS-CoV-2","TTCTAAATCTCCCTTA",3,13.69,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","N64K F99H Y121D C195S",4
"lib2","SARS-CoV-2","TTCTAAATTGAAACTG",2,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96E I104N N171P",3
"lib2","SARS-CoV-2","TTCTAAATTTCCGTAA",3,79.43,7.36,-3.47,0.17,1.93,1.09,0.01,">1 nonsynonymous","T148V N171K",2
"lib2","SARS-CoV-2","TTCTAACCACTTAAAC",4,37.64,6,-4.84,2,3,1.17,0,">1 nonsynonymous","G9S G146W Y165I G172K",4
"lib2","SARS-CoV-2","TTCTAACCGAGTTTTG",12,81.97,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Q84T L95F L122Q Y143T",4
"lib2","SARS-CoV-2","TTCTAACCGTTACCTC",9,115.84,9.13,-1.7,0.08,1.72,1.1,0,"1 nonsynonymous","F12P",1
"lib2","SARS-CoV-2","TTCTAACTAAGCCAAA",6,6.61,6,-4.84,2,1.5,1.04,0,">1 nonsynonymous","I2G D34P G86P E135P",4
"lib2","SARS-CoV-2","TTCTAACTTTAATGCG",1,11.48,10.71,-0.13,0.07,2.87,1.12,0,"1 nonsynonymous","S200P",1
"lib2","SARS-CoV-2","TTCTAAGAAATACGCG",19,61.58,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","S19V C158H V181K",3
"lib2","SARS-CoV-2","TTCTAAGAATAATATA",1,47.91,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","L95A Y121L K128T",3
"lib2","SARS-CoV-2","TTCTAAGACCATTTGA",1,15.97,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F44S T55W I88F",3
"lib2","SARS-CoV-2","TTCTAAGACCCAGCGT",2,39.21,10.82,-0.01,0.06,2.85,1.17,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TTCTAAGACCTAAACT",2,6.87,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","S41Y G51S R124L R136S L187Q",5
"lib2","SARS-CoV-2","TTCTAAGGCAGAAGTT",4,34.45,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","R25Q V37L F44A N118Y A145P",5
"lib2","SARS-CoV-2","TTCTAATAAAAATCAA",14,107.32,6,-4.84,1.94,1.5,1.19,0.02,">1 nonsynonymous","I2R D97F N107S R136G",4
"lib2","SARS-CoV-2","TTCTAATAAGTAATAT",1,6.78,10.62,-0.22,0.14,2.83,1.04,0,"1 nonsynonymous","F12V",1
"lib2","SARS-CoV-2","TTCTAATAGATGAAAA",1,0.17,NA,NA,NA,NA,NA,NA,"stop","A42D G83* P177R",3
"lib2","SARS-CoV-2","TTCTAATAGTAACCCC",1,5.98,6.53,-4.3,0.63,1.5,1.08,0.01,"1 nonsynonymous","C150F",1
"lib2","SARS-CoV-2","TTCTAATATTAACAAG",2,21.33,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T15H Y93K",2
"lib2","SARS-CoV-2","TTCTAATCGATCTAAT",2,72.35,10.72,-0.12,0.05,2.94,1.08,0,"1 nonsynonymous","E141K",1
"lib2","SARS-CoV-2","TTCTAATGTAAAAAAC",5,4.55,NA,NA,NA,NA,NA,NA,"stop","P96A A105Q P149*",3
"lib2","SARS-CoV-2","TTCTAATGTTAAAAAA",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R Y91P",2
"lib2","SARS-CoV-2","TTCTAATTGCACGTTA",3,9.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30R L38R T55Y L95M",4
"lib2","SARS-CoV-2","TTCTAATTTTGTAAAT",10,3.57,NA,NA,NA,NA,NA,NA,"stop","F8* L60V A67T Q79R K87I E141* C150S",7
"lib2","SARS-CoV-2","TTCTACAAACCGCAAT",13,212.73,10.56,-0.28,0.03,2.93,1.05,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","TTCTACAAACGGACAT",1,6.89,6,-4.84,2,3,1,0,">1 nonsynonymous","K56W K87R R124V L183C",4
"lib2","SARS-CoV-2","TTCTACAACATTAAGA",1,53.91,10.95,0.12,0.06,2.94,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTACACCATAAAGA",3,74.28,10.97,0.14,0.06,2.97,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTACACGCATACCA",10,1.2,NA,NA,NA,NA,NA,NA,"stop","K87Q Y119K L131* T201L",4
"lib2","SARS-CoV-2","TTCTACAGTAGTTGGC",13,198.16,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","R16W S113P E141L",3
"lib2","SARS-CoV-2","TTCTACCAAAAAAAAT",8,13.04,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S41F D59S D97S V103S D137S Y159T",6
"lib2","SARS-CoV-2","TTCTACCAGCAAGAAT",4,39.44,10.75,-0.08,0.1,2.89,1.14,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","TTCTACCGAAGTCGCT",6,19.12,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","Y119K R179P",2
"lib2","SARS-CoV-2","TTCTACCGTTGACCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","D68N V77* G117T R127L F156D",5
"lib2","SARS-CoV-2","TTCTACCTAACAGCAA",7,70.6,10.82,-0.02,0.04,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTACCTACACAACG",4,52.2,10.62,-0.22,0.05,2.85,1.15,0,"1 nonsynonymous","Q144H",1
"lib2","SARS-CoV-2","TTCTACGAAAACTTCT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24S D137S G152H G172S L183R P197R",6
"lib2","SARS-CoV-2","TTCTACGAGAATCTAT",7,124.27,8.41,-2.43,0.1,2.43,1.1,0,">1 nonsynonymous","N110A G117S K128W N171Q",4
"lib2","SARS-CoV-2","TTCTACGAGATTAACG",8,5.55,NA,NA,NA,NA,NA,0.43,">1 nonsynonymous","I2L N13G I88G",3
"lib2","SARS-CoV-2","TTCTACGCCCTTTAGA",6,3.77,NA,NA,NA,NA,NA,NA,"stop","C31S F47* Y66N D75S S184I T201I",6
"lib2","SARS-CoV-2","TTCTACGCGAATACTT",1,10.26,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","T3N T15V C150L P197W",4
"lib2","SARS-CoV-2","TTCTACGGTACCGACT",7,1.31,NA,NA,NA,NA,NA,NA,"stop","C6S R16P A22N A33F K114* L183I K198L",7
"lib2","SARS-CoV-2","TTCTACGTAAGAAGAG",6,38.85,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","F134P F167M",2
"lib2","SARS-CoV-2","TTCTACGTACTTAACC",4,59.18,9.32,-1.52,0.19,1.62,1.13,0.02,">1 nonsynonymous","V32L A42R W106L I142F",4
"lib2","SARS-CoV-2","TTCTACTAATAAATAG",1,7.56,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F8Y G86F S113I F167C",4
"lib2","SARS-CoV-2","TTCTACTAGCTCTATT",4,137.02,10.15,-0.69,0.05,2.64,1.04,0,">1 nonsynonymous","A22T P149T H189L",3
"lib2","SARS-CoV-2","TTCTACTCACAGATCA",1,14.22,6.33,-4.5,0.77,3,1.23,0.03,">1 nonsynonymous","A33S C49Y G83S K94M R136A",5
"lib2","SARS-CoV-2","TTCTACTGATACCTCG",4,32.43,10.19,-0.64,0.05,2.96,1,0,">1 nonsynonymous","R27A C61D Q79E Q84E K199T",5
"lib2","SARS-CoV-2","TTCTACTTTTGTAAAT",4,93.3,9.9,-0.94,0.05,2.97,1.03,0,"1 nonsynonymous","G74A",1
"lib2","SARS-CoV-2","TTCTAGAACAAAACCG",3,65.81,10.3,-0.54,0.05,2.75,1,0,">1 nonsynonymous","W106K F160N",2
"lib2","SARS-CoV-2","TTCTAGAACTCAACGG",5,80.2,8.31,-2.52,0.24,1.5,1.16,0.02,">1 nonsynonymous","I28Q Y39N S45T V115Y",4
"lib2","SARS-CoV-2","TTCTAGAAGAAAATTG",1,16.77,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","C61Y I88K S113A Y143V",4
"lib2","SARS-CoV-2","TTCTAGATAACCCTAA",7,90.85,7.69,-3.15,0.21,1.5,1.1,0.01,">1 nonsynonymous","V103T Q176M",2
"lib2","SARS-CoV-2","TTCTAGATCAGCCATG",1,17.01,9.31,-1.53,0.28,1.73,1.06,0.04,">1 nonsynonymous","Y39D P96R",2
"lib2","SARS-CoV-2","TTCTAGCAAAAGGGTT",3,72.79,10.58,-0.25,0.03,2.93,1.07,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","TTCTAGCAAATCCTTA",6,120.07,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","P7T P149R G172Y",3
"lib2","SARS-CoV-2","TTCTAGCACTGTATAG",2,11.91,10.08,-0.75,0.22,1.78,1,0.02,">1 nonsynonymous","S45W G51Q N130M",3
"lib2","SARS-CoV-2","TTCTAGCCCACAACCT",4,13.2,6,-4.84,2,1.5,1.2,0.06,">1 nonsynonymous","A33R D137R K199E",3
"lib2","SARS-CoV-2","TTCTAGCCCTAGAGAA",2,21.73,9.31,-1.53,0.44,1.5,1,0.07,">1 nonsynonymous","Y21L F44H",2
"lib2","SARS-CoV-2","TTCTAGCCGATTCATA",8,141.94,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","T46S N92F Q176S",3
"lib2","SARS-CoV-2","TTCTAGCGATCCACGT",7,39.46,8.46,-2.38,0.14,2.67,1.05,0.01,">1 nonsynonymous","S29M R73S P169N",3
"lib2","SARS-CoV-2","TTCTAGCGCACCTAAG",6,53.73,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","F17S W106F N171D",3
"lib2","SARS-CoV-2","TTCTAGGAAATGCATG",4,63.52,10.56,-0.27,0.05,3,1.03,0,">1 nonsynonymous","E10T C61R",2
"lib2","SARS-CoV-2","TTCTAGGAAGCCTATC",2,4.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10I S41R N58L F160S V181P",5
"lib2","SARS-CoV-2","TTCTAGGACTCAAACT",2,57.73,10.75,-0.09,0.07,2.94,1.07,0,">1 nonsynonymous","S41D T148R",2
"lib2","SARS-CoV-2","TTCTAGTGAGCTGGTG",8,72.19,8.13,-2.71,0.25,1.51,1.21,0.02,">1 nonsynonymous","E10F L95M P169H",3
"lib2","SARS-CoV-2","TTCTAGTGTGGTCGAA",2,15.36,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","S41F K56R N120S G146V N157T Y165R",6
"lib2","SARS-CoV-2","TTCTATAACCTACTAA",4,130.05,9.92,-0.91,0.07,2.42,1.02,0,">1 nonsynonymous","L60P L95M",2
"lib2","SARS-CoV-2","TTCTATAATCAGGCAG",5,47.13,6,-4.84,2,3,1.26,0,">1 nonsynonymous","N107Y R124K",2
"lib2","SARS-CoV-2","TTCTATACGTAGCATA",2,1.2,NA,NA,NA,NA,NA,NA,"stop","F62*",1
"lib2","SARS-CoV-2","TTCTATACTCTCGTGC",12,141.83,10.92,0.08,0.05,2.92,1.1,0,">1 nonsynonymous","N1D I28F P54E",3
"lib2","SARS-CoV-2","TTCTATAGCCAACGTA",9,129.86,9.9,-0.93,0.07,2.14,1.05,0,">1 nonsynonymous","G9E G51A S184R",3
"lib2","SARS-CoV-2","TTCTATATAACCAGAT",6,87.86,10.64,-0.2,0.02,2.98,1,0,">1 nonsynonymous","K87R F99W F160D",3
"lib2","SARS-CoV-2","TTCTATATCTAAATTA",4,2.81,NA,NA,NA,NA,NA,NA,"stop","A81R P149*",2
"lib2","SARS-CoV-2","TTCTATCCTGCTCCGC",5,19.03,7.71,-3.12,0.38,1.5,1,0.05,">1 nonsynonymous","A81D G116Y G152L",3
"lib2","SARS-CoV-2","TTCTATCGACTGAGTG",4,45.34,10.38,-0.45,0.04,2.86,1.14,0,">1 nonsynonymous","C31P T100F",2
"lib2","SARS-CoV-2","TTCTATCTGTCCATTC",7,98.53,10.83,0,0.06,2.84,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTATGCAGCAAACT",8,2.59,NA,NA,NA,NA,NA,NA,"stop","D68E P82L C150W Q168*",4
"lib2","SARS-CoV-2","TTCTATGGATAAGGCT",13,1.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37F F160D",2
"lib2","SARS-CoV-2","TTCTATGGCAACTGCG",5,121.33,6,-4.84,1.83,1.5,1.21,0.02,">1 nonsynonymous","N120T C150D",2
"lib2","SARS-CoV-2","TTCTATGGCGAAAGTC",6,62.44,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","L38H N107K R124L",3
"lib2","SARS-CoV-2","TTCTATGGGTAACGGT",11,276.61,9.48,-1.36,0.04,2.69,1.02,0,">1 nonsynonymous","N40T N64M K87S L95I K128A",5
"lib2","SARS-CoV-2","TTCTATGGGTATTCGT",1,8.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12K A105H",2
"lib2","SARS-CoV-2","TTCTATGTTACCTTAG",21,337.56,10.84,0,0.06,2.95,1.07,0,"1 nonsynonymous","V32W",1
"lib2","SARS-CoV-2","TTCTATTAATCATTAA",4,95.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","D97Y C150E",2
"lib2","SARS-CoV-2","TTCTATTACACGATGC",3,7.04,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S113M Y119A L131S",3
"lib2","SARS-CoV-2","TTCTATTAGAAGTGTC",15,114.88,9.54,-1.29,0.04,1.92,1.1,0,">1 nonsynonymous","N30R S45E F99M",3
"lib2","SARS-CoV-2","TTCTATTAGCACCGGT",7,2.21,NA,NA,NA,NA,NA,NA,"stop","K48* N58* A81S D98R",4
"lib2","SARS-CoV-2","TTCTATTGAAAAGGGA",17,111.02,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I88L P149S N157I",3
"lib2","SARS-CoV-2","TTCTATTGTGAAACCC",11,64.75,8.17,-2.66,0.16,1.55,1.11,0.01,">1 nonsynonymous","R73T T100L P161S",3
"lib2","SARS-CoV-2","TTCTCAAAACACGTCA",1,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V77M P82L G86S",3
"lib2","SARS-CoV-2","TTCTCAAAATTCAATA",1,14.38,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","R27T L162F Q176L",3
"lib2","SARS-CoV-2","TTCTCAAACTATGGAG",1,22.49,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C31W S41N L57H F70H",4
"lib2","SARS-CoV-2","TTCTCAAATTTGATCA",2,14.89,7.52,-3.31,0.59,1.68,1.11,0.06,">1 nonsynonymous","V11C Y91S",2
"lib2","SARS-CoV-2","TTCTCAAGGCTAAATT",16,9.96,NA,NA,NA,NA,NA,NA,"stop","V71*",1
"lib2","SARS-CoV-2","TTCTCAAGGTCTGAGG",3,16.99,9.81,-1.03,0.09,2.91,1.12,0,">1 nonsynonymous","N64S G74Q",2
"lib2","SARS-CoV-2","TTCTCAATACGCATAG",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N109Y N118L C158Y",3
"lib2","SARS-CoV-2","TTCTCAATATGTAATA",1,0.07,NA,NA,NA,NA,NA,NA,"stop","Y121* S129C G152N Q176G",4
"lib2","SARS-CoV-2","TTCTCAATTGTGATAA",3,80.25,10.84,0,0.05,2.96,1.06,0,"1 nonsynonymous","N40E",1
"lib2","SARS-CoV-2","TTCTCACAGGCTACCT",4,3.81,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86D Q168A E186F",3
"lib2","SARS-CoV-2","TTCTCACAGTTAAGAG",7,100.89,10.81,-0.02,0.04,2.95,1.03,0,"1 nonsynonymous","D59T",1
"lib2","SARS-CoV-2","TTCTCACCTGTTGGAT",13,107.38,8.98,-1.85,0.08,1.58,1.1,0,">1 nonsynonymous","L5Q D90I I138E P149Y K198G",5
"lib2","SARS-CoV-2","TTCTCAGAACAATCAA",6,109.68,10.27,-0.57,0.04,2.97,1.06,0,">1 nonsynonymous","N64G E154D S164A",3
"lib2","SARS-CoV-2","TTCTCAGATGTACTAA",7,51.91,8.48,-2.35,0.3,1.5,1,0.04,">1 nonsynonymous","F8V N120Y R136I",3
"lib2","SARS-CoV-2","TTCTCAGTACCTCCAA",7,91.6,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C6S S36P F167D",3
"lib2","SARS-CoV-2","TTCTCAGTTCGCCCGA",11,222.33,10.89,0.05,0.05,2.95,1.06,0,">1 nonsynonymous","F134E P197L",2
"lib2","SARS-CoV-2","TTCTCATGAGCCTCGC",14,112.98,8.59,-2.25,0.14,1.5,1.08,0.01,">1 nonsynonymous","S36F R124K",2
"lib2","SARS-CoV-2","TTCTCATTTGCCGGAT",2,6.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N40S L60V V77E G101V Q168L",5
"lib2","SARS-CoV-2","TTCTCCAAACTGGAAT",6,128.88,10.72,-0.12,0.04,2.93,1.07,0,">1 nonsynonymous","V37L F134H T201F",3
"lib2","SARS-CoV-2","TTCTCCAAGCTCAAGT",14,197.02,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V32K K56W Y91V N107W Y119K N157Q",6
"lib2","SARS-CoV-2","TTCTCCAATTCAACTT",5,160.72,9.39,-1.44,0.06,2.53,1.09,0,">1 nonsynonymous","I2F K94N G174T",3
"lib2","SARS-CoV-2","TTCTCCACTAAATTGA",7,23.94,8.37,-2.47,0.17,1.5,1.02,0.02,">1 nonsynonymous","R127N S184E T201A",3
"lib2","SARS-CoV-2","TTCTCCAGTTGCATCA",9,6.01,NA,NA,NA,NA,NA,NA,"stop","L38Q S69* D98G G117I",4
"lib2","SARS-CoV-2","TTCTCCCGGAAAATCC",14,202.9,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","R25N S36A N58Q S108M",4
"lib2","SARS-CoV-2","TTCTCCCTAGTAGACA",3,21.49,10.75,-0.08,0.08,2.79,1.24,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCTCCCTGCCCCTCA",8,18.87,9.06,-1.78,0.38,1.5,1,0.07,">1 nonsynonymous","S36Y N64P V71L K114R I138A T170F",6
"lib2","SARS-CoV-2","TTCTCCCTTACAGATT",7,91.76,6,-4.84,2,3,1.17,0,">1 nonsynonymous","V32W L60P Y119Q F167L",4
"lib2","SARS-CoV-2","TTCTCCGAAGCTGACG",10,135.82,7.15,-3.69,0.22,1.5,1.07,0.01,">1 nonsynonymous","K26T S147Y L162S",3
"lib2","SARS-CoV-2","TTCTCCGCTTCACAGT",9,106.59,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y121S S139E Y165S N171K",4
"lib2","SARS-CoV-2","TTCTCCGTGCGACCCA",2,28.49,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","Q84P N107F",2
"lib2","SARS-CoV-2","TTCTCCTTGTTCGGGA",7,88.81,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9T P161I",2
"lib2","SARS-CoV-2","TTCTCCTTTAATAAAT",4,10.51,8.8,-2.03,0.22,1.5,1.09,0.03,">1 nonsynonymous","K56S A105P H189R P197L",4
"lib2","SARS-CoV-2","TTCTCGAAGATTTTAT",5,39.09,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","A14G F70P D97G P149S",4
"lib2","SARS-CoV-2","TTCTCGAAGGCATAGT",5,62.45,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N4L D68G S139G N157C",4
"lib2","SARS-CoV-2","TTCTCGAATCCTAAAT",2,66.2,10.2,-0.63,0.04,2.99,1.05,0,">1 nonsynonymous","I138N G174R",2
"lib2","SARS-CoV-2","TTCTCGATGTTTAGGT",3,19.99,6,-4.84,2,1.5,1.28,0.04,">1 nonsynonymous","C6M D98F V115C",3
"lib2","SARS-CoV-2","TTCTCGATTCTAATTT",5,52.11,10.52,-0.32,0.04,2.89,1.08,0,"1 nonsynonymous","D90F",1
"lib2","SARS-CoV-2","TTCTCGCAAAGCATTG",1,28.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12T C61N N118M K132S",4
"lib2","SARS-CoV-2","TTCTCGCCATCTTTCT",4,0,NA,NA,NA,NA,NA,NA,"stop","F44Y D68* G116K",3
"lib2","SARS-CoV-2","TTCTCGCGGAGCCGAC",5,65.5,10.21,-0.62,0.06,2.87,1.06,0,">1 nonsynonymous","A42G G155H",2
"lib2","SARS-CoV-2","TTCTCGGAAAACACTA",5,41.38,10.75,-0.09,0.04,2.98,1.05,0,"1 nonsynonymous","R78C",1
"lib2","SARS-CoV-2","TTCTCGGAGTTCGCAA",7,101.31,10.79,-0.04,0.04,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TTCTCGGGCGCACAGC",5,32.95,8.18,-2.65,0.3,1.5,1,0.03,">1 nonsynonymous","D98L R136M V173S L188T",4
"lib2","SARS-CoV-2","TTCTCGTTAACCTAAA",5,84.26,8.36,-2.47,0.1,2.23,1.06,0,">1 nonsynonymous","G9K S53F Y175Q",3
"lib2","SARS-CoV-2","TTCTCTACGAAGATAA",5,1.19,NA,NA,NA,NA,NA,NA,"stop","I2* G9Q F44S",3
"lib2","SARS-CoV-2","TTCTCTACGCGCAGTA",13,87.24,9.16,-1.68,0.1,1.78,1.05,0.01,">1 nonsynonymous","T100I P133L R136K",3
"lib2","SARS-CoV-2","TTCTCTACTAGTACCG",1,7.7,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","P96T F99E",2
"lib2","SARS-CoV-2","TTCTCTAGAACTCCGA",2,0.32,NA,NA,NA,NA,NA,NA,"stop","K87* Y121Q R136S",3
"lib2","SARS-CoV-2","TTCTCTAGGCATAAAA",5,125.38,10.73,-0.11,0.05,2.89,1.03,0,"1 nonsynonymous","S41R",1
"lib2","SARS-CoV-2","TTCTCTCAACAGCCGG",2,0.77,NA,NA,NA,NA,NA,NA,"stop","D98S K114* K199S",3
"lib2","SARS-CoV-2","TTCTCTCATCAACTCA",3,0.61,NA,NA,NA,NA,NA,NA,"stop","V20G C102F N107S I142*",4
"lib2","SARS-CoV-2","TTCTCTCCCTATGTGG",6,42.74,6.74,-4.09,0.32,1.5,1.12,0.01,">1 nonsynonymous","G83L D90L R136S I142M",4
"lib2","SARS-CoV-2","TTCTCTCCTTCGCAAG",5,108.62,10.1,-0.74,0.05,2.33,1.02,0,">1 nonsynonymous","T15S G51V T148A",3
"lib2","SARS-CoV-2","TTCTCTCTAATACATG",1,0.19,NA,NA,NA,NA,NA,NA,"stop","C102* G155L",2
"lib2","SARS-CoV-2","TTCTCTCTATCCCCAC",2,16.13,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N13F D97R Y143D Y165H V180I",5
"lib2","SARS-CoV-2","TTCTCTCTCCCTATGA",3,8.53,10.52,-0.31,0.03,2.93,1.08,0,">1 nonsynonymous","S36D D98S G116K",3
"lib2","SARS-CoV-2","TTCTCTCTCTCGGCTA",3,0.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47S T85R G116P",3
"lib2","SARS-CoV-2","TTCTCTGGTGTTGGTG",9,0.86,NA,NA,NA,NA,NA,NA,"stop","N1V S43F S53* N130L",4
"lib2","SARS-CoV-2","TTCTCTTAGCACATTT",3,90.01,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","K56C P177Y",2
"lib2","SARS-CoV-2","TTCTCTTATACTAACA",8,52.2,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F44T L125K N171R A190L C195L",5
"lib2","SARS-CoV-2","TTCTCTTCAACCGCGG",22,10.34,6,-4.84,1.5,3,1.21,0.01,"1 nonsynonymous","I80T",1
"lib2","SARS-CoV-2","TTCTCTTCCAAGTACC",4,61.83,7.76,-3.07,0.28,1.5,1.06,0.03,">1 nonsynonymous","F44V D112T K199N",3
"lib2","SARS-CoV-2","TTCTCTTGATACTACA",18,289.76,10.45,-0.39,0.05,2.88,1.05,0,"1 nonsynonymous","F44S",1
"lib2","SARS-CoV-2","TTCTCTTGCCATCACA",5,44.66,9.34,-1.5,0.07,2.54,1.15,0,">1 nonsynonymous","A33V N118L",2
"lib2","SARS-CoV-2","TTCTCTTTACCACGTT",1,0.17,NA,NA,NA,NA,NA,NA,"stop","K199*",1
"lib2","SARS-CoV-2","TTCTCTTTATCCCTAT",11,211.03,9.09,-1.75,0.04,2.91,1.1,0,"1 nonsynonymous","T170C",1
"lib2","SARS-CoV-2","TTCTGAAAAGGTAGCA",5,46.96,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F99E L162D",2
"lib2","SARS-CoV-2","TTCTGAAACGTCGATT",1,63.31,8.57,-2.27,0.27,1.5,1.04,0.04,"1 nonsynonymous","C150P",1
"lib2","SARS-CoV-2","TTCTGAACACATTAAT",1,2.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41V D97K C102A Q168L",4
"lib2","SARS-CoV-2","TTCTGAACACTTATCC",1,0.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85R K87D Q168L",3
"lib2","SARS-CoV-2","TTCTGAACAGATAAGG",2,4.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15S L60T",2
"lib2","SARS-CoV-2","TTCTGAACGGCGGATG",1,28.15,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","R16S S43W K87C C102F A105L E154L",6
"lib2","SARS-CoV-2","TTCTGAAGAAGTCAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","A42L G101F W106*",3
"lib2","SARS-CoV-2","TTCTGAAGGTGCAAAA",7,42.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T3E F44D K94S F167C",4
"lib2","SARS-CoV-2","TTCTGAATACTAATGA",1,92.56,8.79,-2.05,0.14,1.5,1.1,0.01,">1 nonsynonymous","F17Y R27A A33G Y175F S184R",5
"lib2","SARS-CoV-2","TTCTGAATCGCTTTGC",8,21.4,9.49,-1.34,0.14,2.8,1.08,0.01,">1 nonsynonymous","Y35W Y121T P149K",3
"lib2","SARS-CoV-2","TTCTGAATGCTAACTA",5,64.12,6,-4.84,1.32,1.5,1.19,0.02,">1 nonsynonymous","Y121I S129R E135L P149T",4
"lib2","SARS-CoV-2","TTCTGAATTCATATCA",19,80.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F99R V173Y",2
"lib2","SARS-CoV-2","TTCTGAATTTCATGAA",2,46.23,10.1,-0.74,0.12,2.32,1.08,0.01,"1 nonsynonymous","V71M",1
"lib2","SARS-CoV-2","TTCTGACAAATCGTCA",1,26.14,9.98,-0.85,0.12,2.19,1.02,0.01,">1 nonsynonymous","A22L S36I V52Y",3
"lib2","SARS-CoV-2","TTCTGACAAGGCCACT",4,109.58,10.88,0.04,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTGACAGAAGACTA",5,32.43,7.45,-3.38,0.33,1.5,1.15,0.04,">1 nonsynonymous","E76Y D90R N130Y",3
"lib2","SARS-CoV-2","TTCTGACCAGCATTAA",7,50.46,10.85,0.01,0.07,2.82,1.17,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","TTCTGACGAATTTAAC",1,4.28,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTCTGACGCGGTTCTA",1,18.81,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","D68L Y91N V103L G155F",4
"lib2","SARS-CoV-2","TTCTGACTAAATAAAG",25,553.36,10.08,-0.76,0.04,2.7,1.05,0,">1 nonsynonymous","Y178L T193Y V194G",3
"lib2","SARS-CoV-2","TTCTGACTTCAAAACG",2,11.46,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","C6M S41E K56L I80L K94E",5
"lib2","SARS-CoV-2","TTCTGAGAATCAAAAA",1,66.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17R L38P",2
"lib2","SARS-CoV-2","TTCTGAGTGGGCAGAT",7,33.94,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","L5P E76F I88C",3
"lib2","SARS-CoV-2","TTCTGATGTTAGGAGT",3,15.79,10.64,-0.2,0.08,2.91,1.1,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TTCTGCAAAGTCCAGG",6,48.64,9.3,-1.54,0.07,1.88,1.14,0,">1 nonsynonymous","T15A S43L C61W A81V",4
"lib2","SARS-CoV-2","TTCTGCAAATCTTATA",2,38.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36H F99S R136N",3
"lib2","SARS-CoV-2","TTCTGCAACAAAGTAC",2,0,NA,NA,NA,NA,NA,NA,"stop","S36M F44T L60*",3
"lib2","SARS-CoV-2","TTCTGCAAGAGTAATC",3,55.8,7.67,-3.17,0.27,1.5,1.12,0.03,">1 nonsynonymous","V11N Y119M",2
"lib2","SARS-CoV-2","TTCTGCAGCCTGCGCA",2,29.69,9.68,-1.16,0.06,2.75,1.04,0,">1 nonsynonymous","A18G N118A C195D",3
"lib2","SARS-CoV-2","TTCTGCATAAACAACC",8,4.13,NA,NA,NA,NA,NA,NA,"stop","L95* F99V F134T",3
"lib2","SARS-CoV-2","TTCTGCATACACGCAT",10,329.25,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","I2L F12V F44T T170S Y175G",5
"lib2","SARS-CoV-2","TTCTGCATATAAAAAC",1,8.25,9.9,-0.94,0.33,1.85,1,0.05,">1 nonsynonymous","C6G A81G T100N G152T T201I",5
"lib2","SARS-CoV-2","TTCTGCCCTATTGATT",6,93.72,6,-4.84,1.18,2.24,1.11,0,">1 nonsynonymous","A18M N58F Y165Q",3
"lib2","SARS-CoV-2","TTCTGCCGCTTCTCCG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97V W106L E154L P197A",4
"lib2","SARS-CoV-2","TTCTGCGACGCTCTCA",2,0,NA,NA,NA,NA,NA,NA,"stop","I72* G152C Q168N V182L",4
"lib2","SARS-CoV-2","TTCTGCGACTTAATGA",9,0.89,NA,NA,NA,NA,NA,NA,"stop","I88* R179S T201G",3
"lib2","SARS-CoV-2","TTCTGCGCCCCGGTTT",4,1.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N130F A145C",2
"lib2","SARS-CoV-2","TTCTGCGTAGTTATTA",6,26.16,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","G146M F156I L162K",3
"lib2","SARS-CoV-2","TTCTGCGTATGTGGCC",1,20.53,7.75,-3.09,0.14,2.56,1.02,0.01,"1 nonsynonymous","C158S",1
"lib2","SARS-CoV-2","TTCTGGAAAGCTCGTA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","G86* R127L C158R",3
"lib2","SARS-CoV-2","TTCTGGACGCTAATGT",10,101,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N13F K87T G117A C150R Y175C",5
"lib2","SARS-CoV-2","TTCTGGAGATCTACAA",1,24.43,10.62,-0.22,0.07,2.91,1.12,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TTCTGGATCCAACAGT",3,21.76,10.57,-0.26,0.08,2.72,1.33,0.01,"1 nonsynonymous","N4S",1
"lib2","SARS-CoV-2","TTCTGGCAATGTGCAA",1,8.15,6,-4.84,2,1.5,1.07,0,">1 nonsynonymous","F17L V65S G146Y V180S",4
"lib2","SARS-CoV-2","TTCTGGCCGACGTTGT",4,26.27,8.02,-2.82,0.25,1.56,1.14,0.02,">1 nonsynonymous","I2P P96L G101V V115E R136W G166L",6
"lib2","SARS-CoV-2","TTCTGGCGATAAAGGC",3,49.05,6.09,-4.74,0.74,1.5,1.16,0.01,">1 nonsynonymous","C61Q S69A I88T",3
"lib2","SARS-CoV-2","TTCTGGGAAATGGAAC",6,215.48,10.59,-0.25,0.03,2.91,1.09,0,">1 nonsynonymous","R78Q S129M",2
"lib2","SARS-CoV-2","TTCTGGGCTTTGCAGT",1,51.64,6.58,-4.26,0.47,1.5,1.16,0.03,"1 nonsynonymous","N107F",1
"lib2","SARS-CoV-2","TTCTGGTAAGGTCCGG",5,22.02,7.97,-2.86,0.35,1.5,1.06,0.05,">1 nonsynonymous","S41V K48D Y123S Q144K N151A",5
"lib2","SARS-CoV-2","TTCTGGTACTCTCAAC",2,19.43,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","R25P F47L A105S R127T",4
"lib2","SARS-CoV-2","TTCTGGTGCAGTTGTG",2,17.14,10.96,0.13,0.15,2.83,1.19,0.01,">1 nonsynonymous","G9A Q168W",2
"lib2","SARS-CoV-2","TTCTGTAACAATGACC",2,70.33,10.64,-0.19,0.04,2.97,1.02,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","TTCTGTAAGATGAGAA",1,2.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S C49F Y119N T170L",4
"lib2","SARS-CoV-2","TTCTGTACTAATATTG",5,58.38,9.75,-1.08,0.08,2.77,1.05,0,">1 nonsynonymous","F8P R78A",2
"lib2","SARS-CoV-2","TTCTGTATAACATGGT",3,5.95,NA,NA,NA,NA,NA,NA,"stop","A89*",1
"lib2","SARS-CoV-2","TTCTGTCAAAATTGAA",3,0.05,NA,NA,NA,NA,NA,NA,"stop","C61* D112L Y119S S139I V153I",5
"lib2","SARS-CoV-2","TTCTGTCCATTTAGTC",2,2.43,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92D",1
"lib2","SARS-CoV-2","TTCTGTCCGACAAGCC",2,6.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86Y P169G",2
"lib2","SARS-CoV-2","TTCTGTCCGGATAGTG",6,0.92,NA,NA,NA,NA,NA,NA,"stop","S36Q C61* L162M S200G",4
"lib2","SARS-CoV-2","TTCTGTGAATATCGAC",5,39.51,10.37,-0.46,0.08,2.87,1.04,0,">1 nonsynonymous","A42Q S53T Q84F F134G",4
"lib2","SARS-CoV-2","TTCTGTGCCCACTGCG",6,0,NA,NA,NA,NA,NA,NA,"stop","V37E A81Q G86* L162S",4
"lib2","SARS-CoV-2","TTCTGTGCTGTATTAT",1,34.94,10.73,-0.11,0.09,2.97,1.02,0,"1 nonsynonymous","E141T",1
"lib2","SARS-CoV-2","TTCTGTTACGGGGACT",17,304.61,10.88,0.04,0.05,2.92,1.08,0,">1 nonsynonymous","S43G P197T",2
"lib2","SARS-CoV-2","TTCTGTTATATATTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","S36C K48* D97R K114S Q168W",5
"lib2","SARS-CoV-2","TTCTGTTCCTGACAAG",8,87.26,10.74,-0.1,0.05,2.87,1.14,0,"1 nonsynonymous","A192V",1
"lib2","SARS-CoV-2","TTCTTAAACAAGACTT",2,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88H P96R T140E L188T",4
"lib2","SARS-CoV-2","TTCTTAAACATAAGAG",7,133.84,8.37,-2.47,0.08,2.4,1.14,0,">1 nonsynonymous","Y91L Y123V T170H",3
"lib2","SARS-CoV-2","TTCTTAAACCTGAACT",5,39.39,10.91,0.07,0.09,2.98,1.05,0,">1 nonsynonymous","E10I L122K",2
"lib2","SARS-CoV-2","TTCTTAAAGCCTCATG",3,30.07,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","S19G F44S T55G S113I Y123C Y143L",6
"lib2","SARS-CoV-2","TTCTTAACACGGGTGT",5,0.43,NA,NA,NA,NA,NA,NA,"stop","A18* S36E T63A G152D",4
"lib2","SARS-CoV-2","TTCTTAACACTGTACA",3,31.85,6.54,-4.29,0.82,1.5,1.21,0.04,">1 nonsynonymous","N4I C49M",2
"lib2","SARS-CoV-2","TTCTTAACTTAAAGTA",5,32.33,7.91,-2.93,0.29,1.5,1.13,0.04,">1 nonsynonymous","A14S K94G A105T F160Y",4
"lib2","SARS-CoV-2","TTCTTAAGTTACTGGA",4,24.65,6,-4.84,2,1.5,1.34,0.04,">1 nonsynonymous","C102K W106R K128M",3
"lib2","SARS-CoV-2","TTCTTAAGTTTTATAC",12,84.91,9.33,-1.5,0.08,2.02,1.11,0,">1 nonsynonymous","N4R A18H Q84S P161G",4
"lib2","SARS-CoV-2","TTCTTACAGCGAACCA",10,6.25,NA,NA,NA,NA,NA,NA,"stop","C6T N107* Q163C",3
"lib2","SARS-CoV-2","TTCTTACCAAAGATCA",6,24.35,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","L95W L122M P149T V173H",4
"lib2","SARS-CoV-2","TTCTTACCATATATGG",1,2.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61R R124S",2
"lib2","SARS-CoV-2","TTCTTACCATCATATG",1,14.61,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","D90S Y123G G146R",3
"lib2","SARS-CoV-2","TTCTTACCATGAGGCA",3,23.16,10.87,0.04,0.09,2.82,1.19,0,">1 nonsynonymous","K128S V173L",2
"lib2","SARS-CoV-2","TTCTTACCTCATTAAA",3,40.45,6,-4.84,1.62,1.5,1.15,0.03,">1 nonsynonymous","L38D I80S D90N N107L G166L Q176L",6
"lib2","SARS-CoV-2","TTCTTACGAATAGACA",3,73.72,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","N64L Y91S D112M A145T L188R",5
"lib2","SARS-CoV-2","TTCTTAGATAAATCCA",1,4.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K132P L183S",2
"lib2","SARS-CoV-2","TTCTTAGGCGAGAGGG",2,43.7,6.63,-4.21,0.29,1.5,1.05,0.01,">1 nonsynonymous","G9V D34R I88R",3
"lib2","SARS-CoV-2","TTCTTATAAGTCATAA",11,192.03,9.22,-1.62,0.04,2.85,1.1,0,">1 nonsynonymous","K87R N118F",2
"lib2","SARS-CoV-2","TTCTTATAATCATAAT",2,24.46,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","Y35G P82I P96S V115R G174L",5
"lib2","SARS-CoV-2","TTCTTATACACTAATA",1,0.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45C A81H I88S G116A G196P",5
"lib2","SARS-CoV-2","TTCTTATCCAAACACG",3,28.04,6,-4.84,2,3,1.16,0,">1 nonsynonymous","G74D D90G L131R",3
"lib2","SARS-CoV-2","TTCTTATGAGCTATTA",8,82.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28L Y50T N58T Y123M S129N",5
"lib2","SARS-CoV-2","TTCTTATGTTTTGGGA",1,43.08,10.19,-0.65,0.05,2.87,1.06,0,">1 nonsynonymous","Y35H L188P",2
"lib2","SARS-CoV-2","TTCTTATTCAGACTGA",1,0,NA,NA,NA,NA,NA,NA,"stop","F44R K56I L95* N109L Q168C Y178F S184R",7
"lib2","SARS-CoV-2","TTCTTCAAAAAGACAC",5,83.31,8.24,-2.59,0.08,1.92,1.1,0,"1 nonsynonymous","F126P",1
"lib2","SARS-CoV-2","TTCTTCAACTTATATA",4,45.85,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","N92V T100R",2
"lib2","SARS-CoV-2","TTCTTCAAGCTGAATA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","R27W C49* Y91Q P161R",4
"lib2","SARS-CoV-2","TTCTTCAATCCAATAA",2,71.97,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","A14Y C61P C150T",3
"lib2","SARS-CoV-2","TTCTTCACAGAATCAG",2,57.2,10.72,-0.11,0.05,2.95,1.04,0,">1 nonsynonymous","N24E T55A E141R",3
"lib2","SARS-CoV-2","TTCTTCAGCGGACCCG",3,74.17,10.71,-0.13,0.04,2.83,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTCTTCAGGCACACCA",4,67.84,8.09,-2.74,0.17,2.11,1.06,0.01,">1 nonsynonymous","C6V N157H",2
"lib2","SARS-CoV-2","TTCTTCAGTATAAATA",11,107.33,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","F8N K26C D34G V103S",4
"lib2","SARS-CoV-2","TTCTTCCCAGCCTAAC",2,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A D98S Y175Q T201V",4
"lib2","SARS-CoV-2","TTCTTCCCGGCTAGCT",6,43.57,6,-4.84,2,3,1.24,0,">1 nonsynonymous","I2L S45D A89D V115S P149H",5
"lib2","SARS-CoV-2","TTCTTCCCTCCATGCA",5,103.83,10.83,0,0.04,2.91,1.12,0,">1 nonsynonymous","L5Q S19P S43L C61S Q163A",5
"lib2","SARS-CoV-2","TTCTTCGCACGAAAAA",12,183.79,9.59,-1.25,0.05,1.89,1.04,0,">1 nonsynonymous","P54D W106L K198N",3
"lib2","SARS-CoV-2","TTCTTCGTCACCGACA",5,60.48,9.62,-1.21,0.09,2.24,1,0,">1 nonsynonymous","A89G E141H",2
"lib2","SARS-CoV-2","TTCTTGACTATAATCA",10,58.71,6.83,-4.01,0.19,1.98,1.17,0.01,">1 nonsynonymous","T15I T55A F134W F167M A192S K199V",6
"lib2","SARS-CoV-2","TTCTTGAGCAGTAAGT",7,38.54,7.41,-3.43,0.25,1.5,1.12,0.02,">1 nonsynonymous","T85A A89S Y121L Y143M N151T",5
"lib2","SARS-CoV-2","TTCTTGATAAAACTGG",9,272.76,10.2,-0.64,0.04,2.71,1.02,0,">1 nonsynonymous","T3L F134T",2
"lib2","SARS-CoV-2","TTCTTGATAGCTGGCC",4,85.37,10.62,-0.21,0.05,2.9,1.11,0,"1 nonsynonymous","R78L",1
"lib2","SARS-CoV-2","TTCTTGATTTCAGTGC",5,150.28,10.53,-0.31,0.05,2.83,1.16,0,"1 nonsynonymous","Q144H",1
"lib2","SARS-CoV-2","TTCTTGCGAGCACCAA",1,1.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31A A89L S129H K199S",4
"lib2","SARS-CoV-2","TTCTTGGCAAAAGCCG",1,0,NA,NA,NA,NA,NA,NA,"stop","C49V T55S V71* F134* E141G S200G",6
"lib2","SARS-CoV-2","TTCTTGGCTAAACACG",6,125.22,10.81,-0.03,0.05,2.97,1.05,0,">1 nonsynonymous","L60A T201M",2
"lib2","SARS-CoV-2","TTCTTGGTGGACAGAC",1,61.6,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D68W P82T P133T",3
"lib2","SARS-CoV-2","TTCTTGGTGTAGCCAG",11,4.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1R N13K C158K",3
"lib2","SARS-CoV-2","TTCTTGTCAAAAACAT",1,38.41,10.81,-0.03,0.08,2.85,1.15,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","TTCTTGTGACCGAGTT",5,1.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L A14N G86V",3
"lib2","SARS-CoV-2","TTCTTGTGTACAAAAG",8,11.08,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","P54L D97F W106F D112L",4
"lib2","SARS-CoV-2","TTCTTTAAAACATATG",1,94.26,9.16,-1.67,0.04,2.89,1.1,0,">1 nonsynonymous","N64L G166Q",2
"lib2","SARS-CoV-2","TTCTTTAAACGTTAAT",8,62.45,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","T15S T63N G86R S113C L162F",5
"lib2","SARS-CoV-2","TTCTTTAAACTGAACC",2,31.45,6,-4.84,1.53,1.5,1.12,0,">1 nonsynonymous","V32Q D90M Y121Q S139Q V173Y",5
"lib2","SARS-CoV-2","TTCTTTAAAGAGGTCA",10,124.69,9.85,-0.98,0.12,2.1,1.05,0.01,">1 nonsynonymous","W106V I142L",2
"lib2","SARS-CoV-2","TTCTTTACACCATGCC",10,71.17,9.3,-1.53,0.09,1.71,1.05,0,">1 nonsynonymous","F12A K94H",2
"lib2","SARS-CoV-2","TTCTTTACAGATACGC",3,10.33,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","T85I K132N L162G",3
"lib2","SARS-CoV-2","TTCTTTACCTTGCTCC",2,17.24,8.61,-2.23,0.13,2.05,1.09,0,">1 nonsynonymous","N24R C61E D98L Q144F T201V",5
"lib2","SARS-CoV-2","TTCTTTACGTAGACAC",2,2.75,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M A33P G86Q N118R G146L",5
"lib2","SARS-CoV-2","TTCTTTAGAATTGTTA",1,20.08,6.44,-4.4,0.28,1.5,1.03,0.01,"1 nonsynonymous","N92Y",1
"lib2","SARS-CoV-2","TTCTTTAGAGCTCATA",6,158.21,10.79,-0.05,0.04,2.91,1.06,0,"1 nonsynonymous","R27V",1
"lib2","SARS-CoV-2","TTCTTTAGAGTCCATT",1,22.24,10.24,-0.59,0.07,2.92,1.05,0,">1 nonsynonymous","L5S A33E S41A",3
"lib2","SARS-CoV-2","TTCTTTAGTACCATGG",8,0.05,NA,NA,NA,NA,NA,NA,"stop","N118A G146*",2
"lib2","SARS-CoV-2","TTCTTTATTGACTAAA",1,17.99,9.08,-1.76,0.33,1.5,1,0.06,">1 nonsynonymous","N4E C49N",2
"lib2","SARS-CoV-2","TTCTTTCAAGCGTGCA",10,105.5,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F8T I72C K87I Y93I",4
"lib2","SARS-CoV-2","TTCTTTCATTGATATT",11,103.5,10.75,-0.09,0.05,2.79,1.13,0,"1 nonsynonymous","D97S",1
"lib2","SARS-CoV-2","TTCTTTCGCGGACTCT",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* C61T",2
"lib2","SARS-CoV-2","TTCTTTCTATTAAACT",3,13.57,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","S43M C49L T140R G172D",4
"lib2","SARS-CoV-2","TTCTTTGAGGTTGACA",1,10.9,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10L I104Y R124N",3
"lib2","SARS-CoV-2","TTCTTTGCGCGGTCTA",10,57.64,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","E10Y S29R L60M I72A V103T Y175S",6
"lib2","SARS-CoV-2","TTCTTTGTGAAATACC",6,42.97,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","N1L Y35M D59W V71M I104M E141L",6
"lib2","SARS-CoV-2","TTCTTTGTTAGAAAAA",11,87.39,9.12,-1.72,0.11,1.66,1.1,0.01,"1 nonsynonymous","A105L",1
"lib2","SARS-CoV-2","TTCTTTTAGTATGTAA",1,8.2,9.48,-1.36,0.24,1.5,1,0.02,">1 nonsynonymous","C49L L57I Q163M",3
"lib2","SARS-CoV-2","TTCTTTTCATTGACAA",1,38.42,8.04,-2.8,0.17,2,1.05,0.01,">1 nonsynonymous","I2L T46I Q176G",3
"lib2","SARS-CoV-2","TTCTTTTGGCATCTCA",2,21.68,6,-4.84,2,3,1.07,0,">1 nonsynonymous","T55W L95Y S139L P149K",4
"lib2","SARS-CoV-2","TTGAAAAACCCGAGAA",2,87,10.77,-0.06,0.06,2.94,1.08,0,"1 nonsynonymous","H189Y",1
"lib2","SARS-CoV-2","TTGAAAAACGAGAGAG",3,43.12,8.07,-2.77,0.11,2.34,1.07,0,">1 nonsynonymous","G9D K114P R179K",3
"lib2","SARS-CoV-2","TTGAAAAACTTAAAAA",4,132.65,10.82,-0.01,0.05,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAAAAGGAATGGA",4,4.16,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6G S29R I88W V103T S139V L183S",6
"lib2","SARS-CoV-2","TTGAAAAATCCGTCCT",2,61.49,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6V S53H G146R Y178S T201Q",5
"lib2","SARS-CoV-2","TTGAAAAATTCTGTCG",4,0.09,NA,NA,NA,NA,NA,NA,"stop","D59S V77* D112L",3
"lib2","SARS-CoV-2","TTGAAAACAAGGCTAC",16,97.38,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A33V P133I C158L S184M",4
"lib2","SARS-CoV-2","TTGAAAACAGAAAATG",3,18.46,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y93H V103T A105D K128V",4
"lib2","SARS-CoV-2","TTGAAAACGGCTATAT",22,2.35,NA,NA,NA,NA,NA,NA,"stop","L60T D97* R136E",3
"lib2","SARS-CoV-2","TTGAAAACGTAACGGG",2,57.08,9.33,-1.51,0.14,2.13,1.13,0.01,">1 nonsynonymous","V37R D59L Y91W",3
"lib2","SARS-CoV-2","TTGAAAACTTTTATTG",4,14.17,6.31,-4.53,0.82,1.5,1.07,0.05,">1 nonsynonymous","S45T C61S G74M N92T D98F",5
"lib2","SARS-CoV-2","TTGAAAAGCCGTGGAT",17,515.74,10.84,0,0.04,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAAAGTGGACGTT",6,227.65,10.17,-0.66,0.04,2.92,1.06,0,"1 nonsynonymous","I142Q",1
"lib2","SARS-CoV-2","TTGAAAATAACATTGA",1,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96D E141G",2
"lib2","SARS-CoV-2","TTGAAAATAAGTGCTT",2,35.24,10.79,-0.05,0.07,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAAATCAAAGCTT",3,35.07,10.66,-0.18,0.12,2.73,1.21,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAAATGGGATCCG",8,113.43,10.84,0,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAAATTTCGATAG",6,57.14,10.12,-0.72,0.11,2.59,1.06,0,">1 nonsynonymous","T15K N58Y F160G",3
"lib2","SARS-CoV-2","TTGAAACAAGAAAAAT",4,18.65,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","L95W C102Y N118I",3
"lib2","SARS-CoV-2","TTGAAACAATAATTCA",2,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y123S F167R",2
"lib2","SARS-CoV-2","TTGAAACAGGGTTAAG",5,3.2,NA,NA,NA,NA,NA,NA,"stop","G9* T63G R78F P177Q",4
"lib2","SARS-CoV-2","TTGAAACAGTGACGAC",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G86V Y91D L131K N151L",4
"lib2","SARS-CoV-2","TTGAAACATGTAAATA",7,90.99,10.14,-0.69,0.05,2.59,1.02,0,">1 nonsynonymous","N13R C61F",2
"lib2","SARS-CoV-2","TTGAAACCACTCTCCC",8,197.28,8.63,-2.21,0.07,2.83,1.07,0,">1 nonsynonymous","K56S Y143S",2
"lib2","SARS-CoV-2","TTGAAACCATAGGCCC",4,5.74,6,-4.84,2,1.5,1.06,0,"1 nonsynonymous","N92R",1
"lib2","SARS-CoV-2","TTGAAACCGATACGGG",4,91.45,10.57,-0.27,0.05,2.92,1.06,0,">1 nonsynonymous","Y121L T201M",2
"lib2","SARS-CoV-2","TTGAAACGAAGTAAAA",1,23.45,10.91,0.08,0.06,3,1.01,0,"1 nonsynonymous","V37S",1
"lib2","SARS-CoV-2","TTGAAACGCACTGAAT",7,8.52,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","A105S V153G L183E",3
"lib2","SARS-CoV-2","TTGAAACGCCAAAACC",3,46.97,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","S19P F62I Y93R D98L Y119S T148A",6
"lib2","SARS-CoV-2","TTGAAACGCCAGCCTC",5,63.51,10.47,-0.36,0.03,2.91,1.1,0,"1 nonsynonymous","E141C",1
"lib2","SARS-CoV-2","TTGAAACGCTACTCGA",10,194.31,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","A42S G146S G172R",3
"lib2","SARS-CoV-2","TTGAAACTAATGTTCC",4,29.36,9.72,-1.11,0.1,2.31,1,0,">1 nonsynonymous","F134V S184G T201R",3
"lib2","SARS-CoV-2","TTGAAACTATTGTAAA",20,230.96,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","L5T V11S P54Y N157L P197T",5
"lib2","SARS-CoV-2","TTGAAACTGCTGGCAA",12,176.4,10.47,-0.36,0.04,2.87,1.07,0,"1 nonsynonymous","Y66D",1
"lib2","SARS-CoV-2","TTGAAACTTTCAACTA",3,100.67,9.44,-1.4,0.06,2.88,1.14,0,">1 nonsynonymous","T170N K198R",2
"lib2","SARS-CoV-2","TTGAAAGAAGCGCTGT",2,44.22,6.04,-4.8,1.57,1.5,1.24,0.06,">1 nonsynonymous","A14S C61P K87P N110W C150N Y175C",6
"lib2","SARS-CoV-2","TTGAAAGACTTTGACA",3,19.27,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","D90H S129L E154F P161S",4
"lib2","SARS-CoV-2","TTGAAAGATTTCCGTC",12,4.84,NA,NA,NA,NA,NA,NA,"stop","G155* L162T",2
"lib2","SARS-CoV-2","TTGAAAGCACCAATTC",6,26.47,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N40P F99I A105C I142G",4
"lib2","SARS-CoV-2","TTGAAAGCTGGCACTA",6,18.65,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","C6K V103L C150F",3
"lib2","SARS-CoV-2","TTGAAAGGATGGTAAC",1,5.62,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","N107Y N118T",2
"lib2","SARS-CoV-2","TTGAAAGGTATTAAAA",2,59.04,9.58,-1.26,0.1,2.74,1.12,0,">1 nonsynonymous","A22Y S113G",2
"lib2","SARS-CoV-2","TTGAAAGGTGCTTTGA",1,34.64,10.67,-0.17,0.08,2.9,1.06,0,">1 nonsynonymous","A105S N110S I138D",3
"lib2","SARS-CoV-2","TTGAAAGTAAACAAGC",4,35.1,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","L131S L183V",2
"lib2","SARS-CoV-2","TTGAAAGTGCTGTGAG",7,24.16,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","T15M R27S G51R K87G I142N",5
"lib2","SARS-CoV-2","TTGAAATAAGATACAA",8,83.25,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G74T Y121K F160R P169A",4
"lib2","SARS-CoV-2","TTGAAATACCCCGTTG",7,1.26,NA,NA,NA,NA,NA,NA,"stop","L5* N40T K94R T100R G117S P133W Y175S",7
"lib2","SARS-CoV-2","TTGAAATATTGTATGT",1,123.68,9.17,-1.66,0.05,2.88,1.11,0,">1 nonsynonymous","L5G V153H G166I",3
"lib2","SARS-CoV-2","TTGAAATCAGTCGCCA",1,19.44,11.24,0.4,0.11,2.82,1.15,0.01,"1 nonsynonymous","N171F",1
"lib2","SARS-CoV-2","TTGAAATCCTCACACG",2,88.57,10.88,0.04,0.07,2.89,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAAATCGGTATAAG",1,20.69,10.9,0.06,0.03,3,1.01,0,"1 nonsynonymous","N130I",1
"lib2","SARS-CoV-2","TTGAAATCTACCTGAA",10,128.92,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","V11G A89V A105F",3
"lib2","SARS-CoV-2","TTGAAATCTGTTCTCA",3,9.4,6.45,-4.39,0.78,1.5,1.2,0.04,">1 nonsynonymous","L57S G74S K87L G146T P149Q",5
"lib2","SARS-CoV-2","TTGAAATGAAAAAAAC",2,0.2,NA,NA,NA,NA,NA,NA,"stop","T3Q G9W G101N Q176*",4
"lib2","SARS-CoV-2","TTGAAATGACCAAGAG",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* A18W P54I N64A L162E",5
"lib2","SARS-CoV-2","TTGAAATGAGTTATCA",2,76.7,6,-4.84,1.38,1.5,1.2,0.01,">1 nonsynonymous","V37Y Y66P G86M Y91L Y121K",5
"lib2","SARS-CoV-2","TTGAAATGCCGCAGGT",7,307.03,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","L122S Q168R P177K",3
"lib2","SARS-CoV-2","TTGAAATTTCTCACCG",1,8.25,6,-4.84,2,3,1.35,0.01,">1 nonsynonymous","T3Y D137L N151K",3
"lib2","SARS-CoV-2","TTGAACAAAAAGTAAA",2,1.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3F T55S F99P N130T I138E L183H",6
"lib2","SARS-CoV-2","TTGAACAAAACACATA",4,30.95,6.41,-4.42,0.24,1.5,1.08,0,">1 nonsynonymous","V37H F44V P149K Y175M V180S",5
"lib2","SARS-CoV-2","TTGAACAAACCCATTC",2,38.41,8.5,-2.34,0.23,1.5,1.18,0.02,"1 nonsynonymous","D137G",1
"lib2","SARS-CoV-2","TTGAACAACACGAGGA",7,53.24,10.83,-0.01,0.06,2.88,1.14,0,"1 nonsynonymous","V52F",1
"lib2","SARS-CoV-2","TTGAACAAGGTAAGGT",2,12.05,6,-4.84,2,1.5,1.15,0.03,">1 nonsynonymous","D59W G86V",2
"lib2","SARS-CoV-2","TTGAACAATAATTTTG",3,54.47,10.78,-0.06,0.08,2.87,1.12,0,">1 nonsynonymous","L5W T15P L122Q F160S",4
"lib2","SARS-CoV-2","TTGAACACAAACTAAA",4,17.28,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F8M T63D I104P L187F",4
"lib2","SARS-CoV-2","TTGAACATGAGATTAT",5,22.38,10.77,-0.06,0.08,2.83,1.12,0,"1 nonsynonymous","A190Y",1
"lib2","SARS-CoV-2","TTGAACCCTAACACGC",6,103.46,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V11R Y35R L131N L162S",4
"lib2","SARS-CoV-2","TTGAACCGAAGACACG",7,78.01,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","F44C N92W",2
"lib2","SARS-CoV-2","TTGAACCGTACGATAA",4,30.41,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","A89V S113K",2
"lib2","SARS-CoV-2","TTGAACCTAATACTAA",8,71.5,9.03,-1.8,0.05,2.88,1.12,0,">1 nonsynonymous","N4S N24Q S139T F156E",4
"lib2","SARS-CoV-2","TTGAACCTAGGCTACT",2,7.08,6,-4.84,2,3,1.11,0.01,">1 nonsynonymous","A14F A42E K56Q A81G S184P",5
"lib2","SARS-CoV-2","TTGAACCTATCCAGAC",4,3.38,NA,NA,NA,NA,NA,NA,"stop","V11S F17S C49* K56R",4
"lib2","SARS-CoV-2","TTGAACCTGTACCTTA",1,7.53,10.68,-0.15,0.11,2.96,1.07,0,">1 nonsynonymous","S41F V103I",2
"lib2","SARS-CoV-2","TTGAACGAAAAATAAC",2,33.34,9.98,-0.85,0.07,2.54,1,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","TTGAACGGACAAAGTC",7,0.32,NA,NA,NA,NA,NA,NA,"stop","I88* I104H",2
"lib2","SARS-CoV-2","TTGAACGGTCTTACAA",16,292.01,10.8,-0.04,0.07,2.83,1.11,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGAACGTACGTCACC",5,33.75,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","Y143D E154Y S164L",3
"lib2","SARS-CoV-2","TTGAACGTCCAGATTC",7,26.84,9.14,-1.7,0.21,1.54,1.09,0.02,">1 nonsynonymous","V71M D90G",2
"lib2","SARS-CoV-2","TTGAACTACTCCCGAG",8,168.57,10.83,0,0.03,2.92,1.09,0,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TTGAACTATATTACCA",8,72.54,10.49,-0.35,0.04,2.93,1.07,0,">1 nonsynonymous","G9M C61V",2
"lib2","SARS-CoV-2","TTGAACTCAGAGTGCT",1,10.56,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","A18W D34L P161L",3
"lib2","SARS-CoV-2","TTGAACTCGAATAGAC",3,35.14,10.91,0.08,0.05,3,1.02,0,"1 nonsynonymous","Q163G",1
"lib2","SARS-CoV-2","TTGAACTGCATGCAAG",6,68.58,6,-4.84,1.84,1.5,1.26,0.02,">1 nonsynonymous","F12H S69I",2
"lib2","SARS-CoV-2","TTGAACTGGCGGTTGT",6,37.41,8.15,-2.69,0.32,1.5,1,0.04,">1 nonsynonymous","C6M F12W K56C E141S",4
"lib2","SARS-CoV-2","TTGAACTTACTTTACA",9,1.34,NA,NA,NA,NA,NA,NA,"stop","A42* L60C Y119M I138T T148W Y159R",6
"lib2","SARS-CoV-2","TTGAACTTATGATTGA",9,144.99,10.3,-0.54,0.03,2.98,1.01,0,"1 nonsynonymous","E154H",1
"lib2","SARS-CoV-2","TTGAACTTCGATATAC",6,44.47,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","R16Q N30T V37D F62V A81R I88K P96S V103L L131W",9
"lib2","SARS-CoV-2","TTGAACTTTAGCAGTC",1,26.06,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","F99P L122M Y143R S184K",4
"lib2","SARS-CoV-2","TTGAAGAAAATTGAGC",17,252.09,6,-4.84,0.85,1.5,1.2,0.01,">1 nonsynonymous","F62Q A89P G117C",3
"lib2","SARS-CoV-2","TTGAAGAACACTACTT",7,130.07,10.71,-0.12,0.03,2.92,1.08,0,"1 nonsynonymous","K26A",1
"lib2","SARS-CoV-2","TTGAAGACAAACACAC",4,66.27,10.7,-0.14,0.05,2.88,1.11,0,">1 nonsynonymous","S41F N64R S139G P197T T201I",5
"lib2","SARS-CoV-2","TTGAAGACTCAAGCCT",10,22,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","T3H F12S D98I A105Y G155A T170F",6
"lib2","SARS-CoV-2","TTGAAGACTCAATTTT",7,10.55,6,-4.84,2,3,1.32,0.03,"1 nonsynonymous","L95D",1
"lib2","SARS-CoV-2","TTGAAGAGAACCGTTG",7,112.57,9.33,-1.5,0.03,2.96,1.06,0,">1 nonsynonymous","T140K G166C C195L",3
"lib2","SARS-CoV-2","TTGAAGAGAAGCGAAT",3,10.77,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A14G Y21K T55C S69L D75E N110W C150L",7
"lib2","SARS-CoV-2","TTGAAGATCCCCCTTA",6,64.23,7.44,-3.39,0.22,1.5,1.17,0.01,">1 nonsynonymous","C49M K56L Y123L",3
"lib2","SARS-CoV-2","TTGAAGCAAAGCAGCC",12,58.46,6,-4.84,2,3,1.19,0,">1 nonsynonymous","F17T D59A A67G V103T N157D",5
"lib2","SARS-CoV-2","TTGAAGCAATAAATAC",7,33.45,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","L57S Q84H K87S G101E G146S V153I L162S",7
"lib2","SARS-CoV-2","TTGAAGCAGATGGTCT",2,40.99,6,-4.84,2,1.5,1.37,0.05,">1 nonsynonymous","C102M D112F I142T",3
"lib2","SARS-CoV-2","TTGAAGCATAAACCGA",6,62.32,9.47,-1.37,0.08,2.3,1.07,0,">1 nonsynonymous","E141L G155I",2
"lib2","SARS-CoV-2","TTGAAGCATATAACCG",3,28.53,9.51,-1.32,0.19,2.18,1.18,0.03,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","TTGAAGCATTAAGAAA",1,31.81,9.39,-1.45,0.16,2.09,1.08,0.01,">1 nonsynonymous","C49I N64C I138L",3
"lib2","SARS-CoV-2","TTGAAGCATTCGTACA",9,46.55,8.08,-2.76,0.29,1.5,1.14,0.03,">1 nonsynonymous","S43P K48V D90C N118M S200Y",5
"lib2","SARS-CoV-2","TTGAAGCGGACGACCT",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119S",1
"lib2","SARS-CoV-2","TTGAAGCGTTCAGTTC",4,43.01,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F12S G51D D59N",3
"lib2","SARS-CoV-2","TTGAAGCTAGCATTAA",1,14.11,10.86,0.02,0.05,3,1,0,">1 nonsynonymous","A14R S129T",2
"lib2","SARS-CoV-2","TTGAAGCTAGGTTCTG",3,11.31,6,-4.84,2,3,1.05,0,">1 nonsynonymous","N107D T148F G155Y",3
"lib2","SARS-CoV-2","TTGAAGCTGGTCAGCT",12,156.27,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","G51S T85A D98R C150L Q176S",5
"lib2","SARS-CoV-2","TTGAAGGAACAGTATT",3,32.48,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N64Y A105N N120L Q144F",4
"lib2","SARS-CoV-2","TTGAAGGACACAAGCA",4,35,8.12,-2.71,0.09,1.85,1.07,0,">1 nonsynonymous","G86A E135D",2
"lib2","SARS-CoV-2","TTGAAGGACTTTGATG",1,17.42,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","E10V C31R T100F W106I E154M",5
"lib2","SARS-CoV-2","TTGAAGGCAAAATTAA",3,12.41,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","E10C C49L K87F V153F",4
"lib2","SARS-CoV-2","TTGAAGGCAGCTTACA",14,405.24,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","F12L Y159K",2
"lib2","SARS-CoV-2","TTGAAGGGGTGACCTT",2,19.27,10.22,-0.62,0.12,2.61,1.12,0.01,">1 nonsynonymous","T55V P133V",2
"lib2","SARS-CoV-2","TTGAAGGTACCTTAAA",5,138.2,6,-4.84,2,1.5,1.2,0,">1 nonsynonymous","A145V P177I",2
"lib2","SARS-CoV-2","TTGAAGGTTAGAGATC",1,9.9,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","V103E",1
"lib2","SARS-CoV-2","TTGAAGTAGGTGAACA",2,0,NA,NA,NA,NA,NA,NA,"stop","K26R G51R Y91A N118V V173*",5
"lib2","SARS-CoV-2","TTGAAGTATCTTGACC",9,153.03,10.66,-0.18,0.04,2.94,1.07,0,">1 nonsynonymous","T3G N171Q",2
"lib2","SARS-CoV-2","TTGAAGTATGTGTCTT",6,194.58,10.73,-0.1,0.03,2.96,1.05,0,"1 nonsynonymous","Y39G",1
"lib2","SARS-CoV-2","TTGAAGTCTATAACGT",14,12.19,NA,NA,NA,NA,NA,NA,"stop","T63S F160*",2
"lib2","SARS-CoV-2","TTGAAGTGTATCGATG",8,61.64,6.15,-4.68,0.37,1.5,1.14,0.01,">1 nonsynonymous","W23H S69W D112K",3
"lib2","SARS-CoV-2","TTGAAGTTCCTAATAA",6,34.45,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F17L I104T Y119F",3
"lib2","SARS-CoV-2","TTGAATAAATGGTACC",4,112.73,10.68,-0.16,0.06,2.93,1.07,0,">1 nonsynonymous","A14Q T63D",2
"lib2","SARS-CoV-2","TTGAATAACATAGGCC",1,19.44,9.86,-0.97,0.09,2.65,1.01,0.01,">1 nonsynonymous","D34R D98T V173E",3
"lib2","SARS-CoV-2","TTGAATAACATCAGAA",13,93.44,8.59,-2.25,0.11,1.67,1.11,0.01,">1 nonsynonymous","F8S Y39A C61R N110S Y121F",5
"lib2","SARS-CoV-2","TTGAATAAGCCATGAC",1,18.72,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","F12G F99N K199I",3
"lib2","SARS-CoV-2","TTGAATAGCTATCTAA",2,68.57,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F70H Q176Y",2
"lib2","SARS-CoV-2","TTGAATAGGAAAGTGA",3,154.11,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L60S L162A Y178R",3
"lib2","SARS-CoV-2","TTGAATAGTACATATA",3,59.73,10.45,-0.39,0.04,2.99,1.03,0,">1 nonsynonymous","Y35P S41V T63A",3
"lib2","SARS-CoV-2","TTGAATAGTTATAGAG",5,72.98,6,-4.84,2,3,1.15,0,">1 nonsynonymous","C61N G86V V103I",3
"lib2","SARS-CoV-2","TTGAATATAATGAAAA",16,347.52,10.27,-0.57,0.03,2.92,1.03,0,">1 nonsynonymous","F12V I142L",2
"lib2","SARS-CoV-2","TTGAATATAGAATTAC",1,11.38,10.98,0.15,0.07,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAATATCAATATAG",1,57.73,10.79,-0.04,0.05,3,1.03,0,"1 nonsynonymous","Q84K",1
"lib2","SARS-CoV-2","TTGAATATTACATTTC",1,5.58,9.88,-0.96,0.2,2.33,1.13,0.02,"1 nonsynonymous","Y50I",1
"lib2","SARS-CoV-2","TTGAATCAGACTAAAT",2,8.64,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","A14G L122Q N157I",3
"lib2","SARS-CoV-2","TTGAATCATTAAACAT",8,35.43,6,-4.84,2,1.5,1.29,0.04,">1 nonsynonymous","N4V N13W C61D K87G Y121H L131S",6
"lib2","SARS-CoV-2","TTGAATCCCACGTCCT",14,228.32,10.67,-0.17,0.06,2.93,1.08,0,">1 nonsynonymous","P7A T63A",2
"lib2","SARS-CoV-2","TTGAATCCTTTGATAG",3,0,NA,NA,NA,NA,NA,NA,"stop","G9A A67L A105Y L122* F126L",5
"lib2","SARS-CoV-2","TTGAATCGAGTCATTG",8,30.38,6,-4.84,2,1.5,1.3,0.07,">1 nonsynonymous","I104S N118S K128W",3
"lib2","SARS-CoV-2","TTGAATCTAAAAAAGC",18,112.64,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","V71E V153W",2
"lib2","SARS-CoV-2","TTGAATCTGACGTAAA",4,11.15,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","V77S G117S L131G",3
"lib2","SARS-CoV-2","TTGAATCTGAGAGGCG",5,36.65,9.01,-1.83,0.17,1.8,1.1,0.02,">1 nonsynonymous","T15S C49V A145I",3
"lib2","SARS-CoV-2","TTGAATCTGATACGCT",6,50.11,9.95,-0.89,0.06,2.86,1.03,0,"1 nonsynonymous","Q144F",1
"lib2","SARS-CoV-2","TTGAATGAAAGATGGA",2,36.21,9.79,-1.05,0.16,2.6,1.03,0.01,">1 nonsynonymous","P7L S53R N107R P197I",4
"lib2","SARS-CoV-2","TTGAATGACGCTAAGT",1,5.52,9.41,-1.42,0.3,1.5,1,0.03,">1 nonsynonymous","G86E V173R",2
"lib2","SARS-CoV-2","TTGAATGATATAATAT",9,121.66,10.26,-0.57,0.05,2.69,1.05,0,"1 nonsynonymous","N24F",1
"lib2","SARS-CoV-2","TTGAATGCGCATAAAC",7,38.85,6.43,-4.41,0.39,1.5,1.12,0.01,">1 nonsynonymous","R16C K94I",2
"lib2","SARS-CoV-2","TTGAATGGCGGGTCTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69K W106S",2
"lib2","SARS-CoV-2","TTGAATGTAGAGCATT",1,12.26,6,-4.84,2,3,1.04,0,">1 nonsynonymous","D68G Y121L Y143L L162P",4
"lib2","SARS-CoV-2","TTGAATTAAGAATGAG",1,2.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R T85Y Y121L Q176L",4
"lib2","SARS-CoV-2","TTGAATTATGCAGATA",4,89.12,10.81,-0.03,0.04,2.89,1.11,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","TTGAATTCAACTTATA",6,105.11,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","N30K G146V C150N",3
"lib2","SARS-CoV-2","TTGAATTCGATTACGG",1,21.6,10.79,-0.04,0.06,2.91,1.12,0,"1 nonsynonymous","R136K",1
"lib2","SARS-CoV-2","TTGAATTTAACTAATA",4,46.88,6,-4.84,2,3,1.19,0,">1 nonsynonymous","I28M R78C D90F L131N Q144R Q168P",6
"lib2","SARS-CoV-2","TTGAATTTACTATGTT",1,0.19,NA,NA,NA,NA,NA,NA,"stop","P7* K56S K94N",3
"lib2","SARS-CoV-2","TTGAATTTAGAAGCGT",1,5.6,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTGACAAAAGGCGAAT",3,0.46,NA,NA,NA,NA,NA,NA,"stop","D90N Y121* P149T P197R",4
"lib2","SARS-CoV-2","TTGACAAAATATACCA",1,8.14,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","T15K Y93V W106S N130M Q168D",5
"lib2","SARS-CoV-2","TTGACAAACCCACTTA",13,1.86,NA,NA,NA,NA,NA,NA,"stop","S41* C61V G74K S139I",4
"lib2","SARS-CoV-2","TTGACAAATATACTAG",13,94.09,10.15,-0.69,0.05,2.81,1.04,0,">1 nonsynonymous","S19P V37G P149I",3
"lib2","SARS-CoV-2","TTGACAACAGAAACCT",1,30.74,9.81,-1.02,0.08,1.93,1.09,0,"1 nonsynonymous","S69G",1
"lib2","SARS-CoV-2","TTGACAACAGAAAGTA",2,2.74,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50S G146T",2
"lib2","SARS-CoV-2","TTGACAACCGGATAAT",1,9.14,10.81,-0.03,0.11,2.94,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGACAACGGACAGGT",1,14.51,10.79,-0.05,0.04,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGACAAGGAAGTAAA",10,48.36,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","S41M G74L Y143M",3
"lib2","SARS-CoV-2","TTGACACAAGTGAAAC",4,15.05,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V11Y L60S V77R P82R P133T",5
"lib2","SARS-CoV-2","TTGACACAATCAAAAG",4,4.65,NA,NA,NA,NA,NA,NA,"stop","L5P L60N D97L Y143* T148L G166C",6
"lib2","SARS-CoV-2","TTGACACACGCGCAAT",9,27.66,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","A14V L60Q G101P",3
"lib2","SARS-CoV-2","TTGACACATGGTAGGT",3,13.84,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","A33L D59V Y66P S200W",4
"lib2","SARS-CoV-2","TTGACACCAAATCTAA",6,35.76,8.11,-2.72,0.13,2.5,1.14,0.01,">1 nonsynonymous","D59L L125K",2
"lib2","SARS-CoV-2","TTGACACCTCTGCTTG",6,42.68,6,-4.84,2,1.5,1.23,0.07,">1 nonsynonymous","Y91L N118A G152S L162E",4
"lib2","SARS-CoV-2","TTGACACGACAATTCA",3,38.58,6.15,-4.68,0.43,1.65,1.11,0.01,">1 nonsynonymous","F12C A33S D34E K114R P149L G166S",6
"lib2","SARS-CoV-2","TTGACACGTAAGGAAT",11,88.29,9.46,-1.38,0.05,1.93,1.03,0,">1 nonsynonymous","L5I F12W D90A",3
"lib2","SARS-CoV-2","TTGACACTAAAATCCT",13,361.72,10.85,0.01,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACACTCACCGCAA",2,0.17,NA,NA,NA,NA,NA,NA,"stop","S45P P54G Y66V D98T W106* V115E F156D P197E",8
"lib2","SARS-CoV-2","TTGACACTGTCCTCCA",4,24.81,7.65,-3.18,0.41,1.5,1.07,0.04,">1 nonsynonymous","L5S F44V R136Y G146S S184K",5
"lib2","SARS-CoV-2","TTGACACTTAAAGCTA",1,3.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121T P191G",2
"lib2","SARS-CoV-2","TTGACACTTGCGCCCA",2,46.32,10.77,-0.06,0.07,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACAGAAAACCGAT",12,209.01,10.38,-0.45,0.03,2.96,1.06,0,">1 nonsynonymous","P54Q S164G",2
"lib2","SARS-CoV-2","TTGACAGAATAACGTG",6,83.89,6.21,-4.63,0.39,1.5,1.15,0.01,"1 nonsynonymous","G101T",1
"lib2","SARS-CoV-2","TTGACAGATGATTAAA",7,79.17,9.71,-1.13,0.13,2.2,1.08,0.01,">1 nonsynonymous","V11S C61D T201F",3
"lib2","SARS-CoV-2","TTGACAGATGGGTCTG",5,28.01,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","V11Q Y93S K114E",3
"lib2","SARS-CoV-2","TTGACAGCCTTTCAAT",2,26.29,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","W23E F160T",2
"lib2","SARS-CoV-2","TTGACAGGACTGGTCC",2,20.22,10.64,-0.19,0.08,3,1.01,0,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","TTGACAGGCATAGCAC",2,111.19,10.59,-0.24,0.04,2.89,1.07,0,"1 nonsynonymous","F44L",1
"lib2","SARS-CoV-2","TTGACAGGTGAAAAAG",4,35.41,10.83,0,0.05,2.93,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACATAACGCATCT",4,11.98,6.56,-4.28,0.44,1.5,1.13,0.04,">1 nonsynonymous","C61H F99A",2
"lib2","SARS-CoV-2","TTGACATAATTAGCCA",12,125.95,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N24L N30L L57S C158R",4
"lib2","SARS-CoV-2","TTGACATACCAATAGC",1,20.07,8.82,-2.01,0.31,1.55,1.18,0.04,">1 nonsynonymous","C61L I104H G152T",3
"lib2","SARS-CoV-2","TTGACATAGAATCCCA",3,37.41,9.99,-0.85,0.11,2.39,1,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","TTGACATAGAGTTACG",3,93.42,10.9,0.06,0.03,2.97,1.05,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGACATCGTATTGGA",3,88.02,10.57,-0.27,0.04,2.97,1.03,0,">1 nonsynonymous","G9L L188M",2
"lib2","SARS-CoV-2","TTGACATCTCTTGGAA",3,7.88,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","T85M F99A K114Y Y121E G146S V153K",6
"lib2","SARS-CoV-2","TTGACCAAAAAAATAA",1,14.48,6,-4.84,2,1.5,1.09,0.02,">1 nonsynonymous","K56R F70T N120F",3
"lib2","SARS-CoV-2","TTGACCAAACAGTAAG",2,10.53,9.84,-0.99,0.15,2.78,1.11,0.01,"1 nonsynonymous","A14V",1
"lib2","SARS-CoV-2","TTGACCAAATCTAGGT",5,38.26,10.8,-0.03,0.08,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACCAAGCGGACTT",2,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35C L60P Y91T V103K V115Q P149L",6
"lib2","SARS-CoV-2","TTGACCAAGTTCCATT",11,61.31,6.02,-4.82,0.99,1.5,1.2,0.02,">1 nonsynonymous","K56G R73M I80L N109R P169F T201K",6
"lib2","SARS-CoV-2","TTGACCAATAACTCGG",1,25.49,10.65,-0.19,0.08,2.78,1.21,0,"1 nonsynonymous","G116M",1
"lib2","SARS-CoV-2","TTGACCAATTATTAGA",2,6.81,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","L57H N107F Y119T",3
"lib2","SARS-CoV-2","TTGACCACTCATGATA",2,9.81,6.63,-4.21,0.31,1.5,1.04,0.01,">1 nonsynonymous","T100H W106S Y119A",3
"lib2","SARS-CoV-2","TTGACCAGCTCACCGC",3,30.58,10.75,-0.08,0.04,2.83,1.15,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACCATGACCTAAA",2,14.66,10.58,-0.26,0.43,2.45,1,0.04,">1 nonsynonymous","C6V L188S",2
"lib2","SARS-CoV-2","TTGACCATTAAAAACC",5,79.4,8.72,-2.12,0.08,2.93,1.14,0,">1 nonsynonymous","S36D K56Y K87I N157G",4
"lib2","SARS-CoV-2","TTGACCCAAAGTCGCG",3,20.49,8.52,-2.32,0.23,1.5,1,0.03,">1 nonsynonymous","S19L D97N",2
"lib2","SARS-CoV-2","TTGACCCACCGCGACT",1,6.89,9.3,-1.54,0.15,2.1,1,0.01,">1 nonsynonymous","I28T S184A",2
"lib2","SARS-CoV-2","TTGACCCAGTACAAAA",18,16.67,NA,NA,NA,NA,NA,NA,"stop","F12R K48L V173* Y178V",4
"lib2","SARS-CoV-2","TTGACCCATATTCGCA",2,57.37,10.26,-0.58,0.05,2.79,1.09,0,">1 nonsynonymous","F47V A105V",2
"lib2","SARS-CoV-2","TTGACCCCATCAGTAA",2,81.38,8.31,-2.52,0.16,1.54,1.11,0.01,">1 nonsynonymous","Q84H N118K T140Y",3
"lib2","SARS-CoV-2","TTGACCCCGCTTCACA",4,57.78,6.19,-4.65,0.9,1.5,1.23,0.03,">1 nonsynonymous","T15I V37R L60K G155I",4
"lib2","SARS-CoV-2","TTGACCCTAGAAACCC",17,183.98,10.81,-0.03,0.06,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACCCTTTCATAAA",1,10.83,6,-4.84,2,1.5,1.12,0.04,">1 nonsynonymous","C49I R73K K94C",3
"lib2","SARS-CoV-2","TTGACCGTTCAGCACT",1,43.21,6,-4.84,2,1.5,1.09,0,"1 nonsynonymous","N92Y",1
"lib2","SARS-CoV-2","TTGACCTGGTTTAAAC",12,87.95,10.72,-0.12,0.03,2.93,1.07,0,">1 nonsynonymous","E10D S36R A42L P54Y A190S",5
"lib2","SARS-CoV-2","TTGACCTTATAAACGA",10,9.28,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S45N F70Q I104N A190R",4
"lib2","SARS-CoV-2","TTGACGAAATATAAAA",5,50.32,9.29,-1.55,0.14,1.6,1.04,0.01,"1 nonsynonymous","W23E",1
"lib2","SARS-CoV-2","TTGACGAATCAAACTT",3,52.12,10.85,0.01,0.07,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGACGAATCACCATG",11,56.11,8.5,-2.34,0.34,1.5,1,0.05,">1 nonsynonymous","K94Q W106R",2
"lib2","SARS-CoV-2","TTGACGAGTTCGGTCG",2,13.88,6,-4.84,2,2.98,1.03,0.01,">1 nonsynonymous","I2K N107H L183K H189C",4
"lib2","SARS-CoV-2","TTGACGATAAAACAAG",14,43.22,6.79,-4.04,0.61,1.5,1.31,0.05,">1 nonsynonymous","T15L P82M K198S",3
"lib2","SARS-CoV-2","TTGACGCAATTCTAAT",1,13.24,10.75,-0.09,0.08,2.95,1.06,0.01,"1 nonsynonymous","T85V",1
"lib2","SARS-CoV-2","TTGACGCACGGTAAAA",1,10.02,8.02,-2.82,0.5,1.5,1.16,0.06,">1 nonsynonymous","K48H C61K E154R V173T",4
"lib2","SARS-CoV-2","TTGACGCATTAAAATG",1,4.4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55K L95R G101L",3
"lib2","SARS-CoV-2","TTGACGCCTTATAGTC",1,12,6,-4.84,2,3,1.17,0,">1 nonsynonymous","F62L F134Y L162S L183M",4
"lib2","SARS-CoV-2","TTGACGCGGTGCAATA",2,2.42,NA,NA,NA,NA,NA,NA,"stop","D34* K132M",2
"lib2","SARS-CoV-2","TTGACGCGTTCAAGTT",3,51.26,10.84,0,0.06,2.84,1.16,0,"1 nonsynonymous","L5E",1
"lib2","SARS-CoV-2","TTGACGCTAATGTCGC",14,2.39,NA,NA,NA,NA,NA,NA,"stop","F44T Y50H C61L T100Q K132G N157S Y165* G174E",8
"lib2","SARS-CoV-2","TTGACGCTTGTTTATA",5,25.76,8.78,-2.06,0.17,1.59,1.15,0.01,"1 nonsynonymous","S19L",1
"lib2","SARS-CoV-2","TTGACGGACCTACTCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57E A89S V103K E141L L162Y",5
"lib2","SARS-CoV-2","TTGACGGCATGGGCAT",3,59.3,8.41,-2.43,0.1,2.12,1.11,0,">1 nonsynonymous","G51Y T100I Y119P",3
"lib2","SARS-CoV-2","TTGACGGCCTATACTG",3,62.99,10.8,-0.03,0.08,2.87,1.12,0,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","TTGACGGCTGCCAGGT",9,173.46,10.76,-0.08,0.05,2.93,1.09,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TTGACGGGTACACTCA",4,39.94,6.92,-3.91,0.5,1.5,1.41,0.05,">1 nonsynonymous","Y50G K56W D112L Y159F",4
"lib2","SARS-CoV-2","TTGACGGGTCAAATCA",3,2.71,NA,NA,NA,NA,NA,NA,"stop","V37Y K114H L122I K128T P169*",5
"lib2","SARS-CoV-2","TTGACGGTGAGAAAAA",5,102.57,10.54,-0.3,0.04,2.92,1.04,0,"1 nonsynonymous","A18R",1
"lib2","SARS-CoV-2","TTGACGTACCATATAC",5,0,NA,NA,NA,NA,NA,NA,"stop","S19H G86I T100N D112* K128S E135K F160T",7
"lib2","SARS-CoV-2","TTGACGTACTCTCCAT",1,19.96,10.27,-0.56,0.06,2.92,1.1,0,">1 nonsynonymous","C6M S43R",2
"lib2","SARS-CoV-2","TTGACGTACTTACAAA",12,57.15,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F70V Y175I K198W",3
"lib2","SARS-CoV-2","TTGACGTAGTCTCAAG",4,28.76,6.19,-4.65,1.39,1.5,1.35,0.05,">1 nonsynonymous","F12T S45Y Y121A",3
"lib2","SARS-CoV-2","TTGACGTCTATAACAA",2,0.37,NA,NA,NA,NA,NA,NA,"stop","I80S D98* P133V G155H",4
"lib2","SARS-CoV-2","TTGACGTCTCTTACAA",1,6.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F44Y T63Y Q79E P133S",4
"lib2","SARS-CoV-2","TTGACTAAAATCAAAC",9,245,6,-4.84,1.03,1.5,1.14,0,">1 nonsynonymous","S36L N92E",2
"lib2","SARS-CoV-2","TTGACTAAAATTAAAG",7,138.95,9.16,-1.68,0.06,2.82,1.11,0,">1 nonsynonymous","E10P T100L K114P S200T",4
"lib2","SARS-CoV-2","TTGACTAAATATCGCA",6,23.95,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","F8H I88K L183F",3
"lib2","SARS-CoV-2","TTGACTAACCTTCAAG",2,24.99,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38P I88G",2
"lib2","SARS-CoV-2","TTGACTAATACTAAAC",5,42.34,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F62I G101Y N107I",3
"lib2","SARS-CoV-2","TTGACTAATATGATAT",9,72.06,10.8,-0.03,0.06,2.93,1.1,0,"1 nonsynonymous","G83R",1
"lib2","SARS-CoV-2","TTGACTACACACTCAT",12,37.62,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","Y35G S69R T85F I104Q S113R S139V G155F A192T",8
"lib2","SARS-CoV-2","TTGACTACTGCTTTTC",7,109.28,9.26,-1.57,0.03,2.91,1.09,0,"1 nonsynonymous","F126Y",1
"lib2","SARS-CoV-2","TTGACTAGAAAACATT",1,15.83,7.98,-2.86,0.24,1.5,1.01,0.02,">1 nonsynonymous","V11L Y91L T100L Y121C",4
"lib2","SARS-CoV-2","TTGACTAGCGGCATAG",6,4.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13E S69Q I88R K128R N171D V180T",6
"lib2","SARS-CoV-2","TTGACTATAAAAGTAA",12,40.04,10.98,0.14,0.06,2.97,1.03,0,">1 nonsynonymous","V37K F160R",2
"lib2","SARS-CoV-2","TTGACTATAAATGTAA",10,113.87,8.62,-2.21,0.05,1.92,1.08,0,">1 nonsynonymous","Y91Q N107P",2
"lib2","SARS-CoV-2","TTGACTATCAATGTGG",5,23.59,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","N13H C61F R78W Y93H T140D Q163T",6
"lib2","SARS-CoV-2","TTGACTATGCGTAGAA",2,11.16,10.54,-0.29,0.11,2.82,1.04,0.01,">1 nonsynonymous","S41L G152M",2
"lib2","SARS-CoV-2","TTGACTATTGAATCGC",1,52.33,9.78,-1.06,0.09,2.4,1.09,0,">1 nonsynonymous","R78P V181L",2
"lib2","SARS-CoV-2","TTGACTCAAAACCGTG",2,100.34,10.72,-0.12,0.04,2.93,1.08,0,">1 nonsynonymous","D90N F160M",2
"lib2","SARS-CoV-2","TTGACTCAGCACGGTA",6,177.89,9.18,-1.66,0.03,2.97,1.06,0,">1 nonsynonymous","N157S T193G",2
"lib2","SARS-CoV-2","TTGACTCCCAGTCTGG",2,39.08,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","K56E A81T L95E P96H T100G V153F P169L",7
"lib2","SARS-CoV-2","TTGACTCCCATAATCC",2,9.09,6,-4.84,1.81,1.5,1.17,0.03,">1 nonsynonymous","S19Y F47N N120R S129R G155M",5
"lib2","SARS-CoV-2","TTGACTGAAATACCCG",7,53.25,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","E10W S36I L60Y G83Y Y91G C102R Q163L",7
"lib2","SARS-CoV-2","TTGACTGAGAAAGGTG",4,28.78,8.19,-2.65,0.29,1.5,1.05,0.03,">1 nonsynonymous","F134V V153N G166L",3
"lib2","SARS-CoV-2","TTGACTGATAACAAAT",15,148.6,10.21,-0.63,0.03,2.81,1.05,0,">1 nonsynonymous","K56F N64L N120G",3
"lib2","SARS-CoV-2","TTGACTGGTATCTTCG",5,55.85,10.2,-0.64,0.07,2.75,1.07,0,">1 nonsynonymous","Q84Y P149T",2
"lib2","SARS-CoV-2","TTGACTGTGATTATAA",15,257.96,9.2,-1.64,0.06,2.72,1.08,0,">1 nonsynonymous","S139M A145P Q168H L187Q P197H",5
"lib2","SARS-CoV-2","TTGACTTAGTGCAGTC",6,58.07,10.92,0.09,0.05,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGACTTATCTTTCCG",5,93.81,7.75,-3.08,0.09,1.94,1.06,0,">1 nonsynonymous","C6Q A145C T170S",3
"lib2","SARS-CoV-2","TTGACTTGAACTTTAT",1,0.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17N D59S R73N",3
"lib2","SARS-CoV-2","TTGACTTGAATGCCTG",7,73.22,6.93,-3.91,0.38,1.5,1.05,0.03,">1 nonsynonymous","T55F L95H N107T K114M S184V",5
"lib2","SARS-CoV-2","TTGACTTGTAACCATA",8,1.71,NA,NA,NA,NA,NA,NA,"stop","C61V D112L P149*",3
"lib2","SARS-CoV-2","TTGACTTTACTTGATG",5,73.8,6,-4.84,2,3,1.13,0,">1 nonsynonymous","I2D F8N V20L L60I",4
"lib2","SARS-CoV-2","TTGAGAAAATATTGTA",4,41.87,10.66,-0.18,0.08,2.65,1.24,0,"1 nonsynonymous","Y39W",1
"lib2","SARS-CoV-2","TTGAGAAACAGTGTAT",6,10.06,8.78,-2.06,0.62,1.5,1,0.06,">1 nonsynonymous","T3K V77R R136C",3
"lib2","SARS-CoV-2","TTGAGAAATAAAAAGC",16,68.94,6,-4.84,2,1.5,1.28,0.02,">1 nonsynonymous","N24R Y35S C49T",3
"lib2","SARS-CoV-2","TTGAGAAATATAGAGC",2,6.63,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","V20W L57R T85F",3
"lib2","SARS-CoV-2","TTGAGAAATCATTATT",7,73.93,10.39,-0.45,0.04,2.89,1.08,0,"1 nonsynonymous","N13T",1
"lib2","SARS-CoV-2","TTGAGAACATCGACCT",4,90.95,8.67,-2.17,0.07,2.59,1.11,0,">1 nonsynonymous","N110G I142R V153F",3
"lib2","SARS-CoV-2","TTGAGAACGGTTGAAA",1,0.03,NA,NA,NA,NA,NA,NA,"stop","G9R Q84*",2
"lib2","SARS-CoV-2","TTGAGAACTGTAGTGC",6,97.67,9.46,-1.37,0.04,2.88,1.11,0,"1 nonsynonymous","Y119G",1
"lib2","SARS-CoV-2","TTGAGAAGACCCGTAT",4,70.3,10.65,-0.18,0.03,2.93,1.08,0,"1 nonsynonymous","D90L",1
"lib2","SARS-CoV-2","TTGAGAATATGTGACG",7,60.45,10.03,-0.81,0.06,2.91,1.03,0,">1 nonsynonymous","N58L Y121L",2
"lib2","SARS-CoV-2","TTGAGAATCAATTAAA",5,19.62,6,-4.84,2,1.5,1.31,0.04,">1 nonsynonymous","F12L Q84R T100F E141I Y165S G172K R179N",7
"lib2","SARS-CoV-2","TTGAGAATGAAGTGAA",9,147.95,6.06,-4.78,0.72,1.5,1.14,0.01,">1 nonsynonymous","N58K L122G F134H Y175T P197A",5
"lib2","SARS-CoV-2","TTGAGAATGTGCCAAA",3,26.71,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T63D S147L C150Y E154D T170A",5
"lib2","SARS-CoV-2","TTGAGACAAAATGTAG",2,57.67,10.45,-0.39,0.05,2.98,1.03,0,">1 nonsynonymous","C61R Y66L T85S N110L F160M",5
"lib2","SARS-CoV-2","TTGAGACAGACGTAAT",5,4.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T85M C102D T140L",3
"lib2","SARS-CoV-2","TTGAGACAGACTCGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","N58S A67G G116* I138R V153R",5
"lib2","SARS-CoV-2","TTGAGACAGGCTTAAA",4,106.35,9.46,-1.38,0.05,2.87,1.12,0,">1 nonsynonymous","E141P T148S F156N",3
"lib2","SARS-CoV-2","TTGAGACGGGGATGGC",3,55.91,10.81,-0.03,0.05,2.93,1.07,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","TTGAGACTAGTTTAAA",13,126.38,10.16,-0.68,0.06,2.52,1.08,0,">1 nonsynonymous","A42H K94S",2
"lib2","SARS-CoV-2","TTGAGACTTTTACCGG",1,50.51,10.88,0.04,0.05,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAGAGAGACTAAGC",9,222.58,10.56,-0.27,0.04,2.92,1.07,0,">1 nonsynonymous","V11M V37F",2
"lib2","SARS-CoV-2","TTGAGAGAGGACAAAT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","I80* I104M",2
"lib2","SARS-CoV-2","TTGAGAGATATGAACT",5,34.02,10.63,-0.21,0.06,2.93,1.04,0,">1 nonsynonymous","L5Y S41R K87Y",3
"lib2","SARS-CoV-2","TTGAGAGCGAAAAAAC",7,72.09,10.13,-0.71,0.03,2.95,1.03,0,">1 nonsynonymous","C6G S43I",2
"lib2","SARS-CoV-2","TTGAGAGTATTAACCT",3,9.42,6.31,-4.53,2,1.94,1.28,0.04,">1 nonsynonymous","L5F E76T K87E K114L E154C",5
"lib2","SARS-CoV-2","TTGAGAGTGTCATATT",11,170.35,10.53,-0.31,0.03,2.93,1.07,0,">1 nonsynonymous","K26M T63I",2
"lib2","SARS-CoV-2","TTGAGAGTTATAACCA",1,12.09,9,-1.83,0.14,2.88,1.12,0,">1 nonsynonymous","C61N Q176S",2
"lib2","SARS-CoV-2","TTGAGATGTTCTAATC",1,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A V71P N171I",3
"lib2","SARS-CoV-2","TTGAGATTAAATCGTT",3,30.3,10.74,-0.09,0.06,2.82,1.18,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","TTGAGATTCACACTGC",9,90.36,10.4,-0.44,0.05,2.89,1.04,0,">1 nonsynonymous","G116V A190F",2
"lib2","SARS-CoV-2","TTGAGCAAAAAGAGCA",4,0.32,NA,NA,NA,NA,NA,NA,"stop","C61* V103N R127A",3
"lib2","SARS-CoV-2","TTGAGCAATGAAGTAC",2,4.61,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F160S",1
"lib2","SARS-CoV-2","TTGAGCAGATAAAGAA",1,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96M D112L N120E G146F",4
"lib2","SARS-CoV-2","TTGAGCATGACATTGA",4,33.63,6,-4.84,2,1.5,1.05,0.01,">1 nonsynonymous","K94S L122F L131C G152I F185I",5
"lib2","SARS-CoV-2","TTGAGCATTAATGTTT",5,4.66,NA,NA,NA,NA,NA,NA,"stop","F44S A105*",2
"lib2","SARS-CoV-2","TTGAGCCAATGAGGAT",11,0,NA,NA,NA,NA,NA,NA,"stop","Y121F K132* I138K Q168C",4
"lib2","SARS-CoV-2","TTGAGCCCAAAATTGA",1,24.78,7.85,-2.99,0.35,1.51,1.22,0.03,">1 nonsynonymous","I2S A105T S113K N120S",4
"lib2","SARS-CoV-2","TTGAGCCCATTACTCC",4,110.74,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C150G Y175N",2
"lib2","SARS-CoV-2","TTGAGCGATAAAGAAC",5,61,7.61,-3.23,0.24,1.5,1.12,0.02,">1 nonsynonymous","I28K Y39V D98A",3
"lib2","SARS-CoV-2","TTGAGCGCAAGCATAC",13,0.05,NA,NA,NA,NA,NA,NA,"stop","I72* D90F D98S G116H P149A G172S",6
"lib2","SARS-CoV-2","TTGAGGAGAAAAGGTC",4,6.74,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D98Q N120H Y165W G172T",4
"lib2","SARS-CoV-2","TTGAGGCAGTTATGAA",3,30.4,6,-4.84,2,1.5,1.17,0.02,"1 nonsynonymous","I104P",1
"lib2","SARS-CoV-2","TTGAGGCCCTAGTGAA",18,40.01,NA,NA,NA,NA,NA,NA,"stop","L5H V37G V52L S69D L122*",5
"lib2","SARS-CoV-2","TTGAGGCCCTATGCCA",8,2.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R N64L F126N",3
"lib2","SARS-CoV-2","TTGAGGCGAGTATCAA",5,51.58,6.7,-4.13,0.31,1.5,1.13,0.02,">1 nonsynonymous","S43E D137R",2
"lib2","SARS-CoV-2","TTGAGGCTCCTAGTAA",8,105.62,6,-4.84,2,1.5,1.3,0.02,">1 nonsynonymous","N13R D90I Y119R Q176A",4
"lib2","SARS-CoV-2","TTGAGGCTGTAAAGGG",2,4.04,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","TTGAGGGGCGATTGTT",3,0,NA,NA,NA,NA,NA,NA,"stop","V20K F44Y Y159*",3
"lib2","SARS-CoV-2","TTGAGGGGTACTATAA",3,10.41,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","S41H I72T F126K L183N",4
"lib2","SARS-CoV-2","TTGAGGTAAATCACAG",13,242.85,9.95,-0.89,0.05,2.76,1.05,0,"1 nonsynonymous","Y121S",1
"lib2","SARS-CoV-2","TTGAGGTGTGCATGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","Y66N N107A I138A F156* F167L",5
"lib2","SARS-CoV-2","TTGAGGTTCTTATTAT",1,37.23,10.76,-0.07,0.07,2.99,1.04,0,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TTGAGGTTTATGAAAG",6,68.11,10.81,-0.03,0.04,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAGTAAAGCGTAAG",6,33.89,9.32,-1.52,0.08,2.88,1.1,0,">1 nonsynonymous","Y119D E186D",2
"lib2","SARS-CoV-2","TTGAGTAATTTATAAA",22,138.37,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","N64D V77S A81G W106C G152V",5
"lib2","SARS-CoV-2","TTGAGTAGAAGAGATT",1,28.84,10.89,0.06,0.08,2.93,1.09,0,">1 nonsynonymous","V37T S200H",2
"lib2","SARS-CoV-2","TTGAGTAGATAGTATG",1,28.49,8.75,-2.09,0.08,3,1.12,0,">1 nonsynonymous","L125E T201M",2
"lib2","SARS-CoV-2","TTGAGTATTTAACATA",1,3.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39R N120A K128W K198L",4
"lib2","SARS-CoV-2","TTGAGTCAATTATGGC",3,1.38,NA,NA,NA,NA,NA,NA,"stop","A33M E76P D90* D112T P177T",5
"lib2","SARS-CoV-2","TTGAGTCCAGATTGTG",10,131.59,10.55,-0.29,0.04,2.96,1.05,0,">1 nonsynonymous","S108G P197F",2
"lib2","SARS-CoV-2","TTGAGTCTATGCTTGC",1,133.72,10.88,0.05,0.05,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAGTGAGAATAGAT",2,31.82,NA,NA,NA,NA,NA,0.17,">1 nonsynonymous","I2C V20R N58F Y165A",4
"lib2","SARS-CoV-2","TTGAGTGCACAACATA",14,120.99,10.11,-0.73,0.06,2.1,1.07,0,">1 nonsynonymous","K26Q N64C D98F K132H",4
"lib2","SARS-CoV-2","TTGAGTGCTGGACAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","Y35* I72P R136K",3
"lib2","SARS-CoV-2","TTGAGTGGACGTTCGA",10,168.05,10.85,0.01,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGAGTGGGCCAATTG",3,30.32,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V103R L122H K132P K199I",4
"lib2","SARS-CoV-2","TTGAGTGTTGCTAAAT",2,2.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6P Y93R S129R G155K E186G",5
"lib2","SARS-CoV-2","TTGAGTTAAGAGACAA",1,2.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R A14F L57T G117C C158I P197A",6
"lib2","SARS-CoV-2","TTGAGTTAATACAATC",1,3.95,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6W D34F E141Y Y175P L188H",5
"lib2","SARS-CoV-2","TTGAGTTAATACCGCG",4,69.11,9.53,-1.3,0.05,2.96,1.06,0,"1 nonsynonymous","G117A",1
"lib2","SARS-CoV-2","TTGAGTTGATATAATA",11,80.2,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Q79H K94M L122T N157H Y165I",5
"lib2","SARS-CoV-2","TTGAGTTGGATATACA",1,32.83,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","V71R E76W G152Y",3
"lib2","SARS-CoV-2","TTGAGTTGGTATTGCA",10,87.02,10.75,-0.08,0.07,2.87,1.05,0,"1 nonsynonymous","T100W",1
"lib2","SARS-CoV-2","TTGAGTTTAACATAGC",4,51.98,7.58,-3.25,0.32,1.5,1.16,0.04,">1 nonsynonymous","F99L P161S",2
"lib2","SARS-CoV-2","TTGATAAAAATTAGTG",12,69.52,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","W106C R179D",2
"lib2","SARS-CoV-2","TTGATAAAACAGAGCC",10,72.62,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","F47S A89G L122Y",3
"lib2","SARS-CoV-2","TTGATAAACTGAGCGG",3,27.85,9.52,-1.32,0.1,2.3,1.02,0.01,">1 nonsynonymous","G86S S200Y",2
"lib2","SARS-CoV-2","TTGATAAAGAAATGTT",2,0.72,NA,NA,NA,NA,NA,NA,"stop","E10K D68*",2
"lib2","SARS-CoV-2","TTGATAAAGAACCAGA",11,242.93,10.69,-0.15,0.05,2.94,1.07,0,">1 nonsynonymous","V37G T55N S184W",3
"lib2","SARS-CoV-2","TTGATAAAGAAGCACT",1,9.16,10.97,0.14,0.18,2.87,1.17,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TTGATAAAGTGCTCGT",1,1.17,NA,NA,NA,NA,NA,NA,"stop","A33* T46S T100* E154W P161R Q168L R179K",7
"lib2","SARS-CoV-2","TTGATAAATTACATAG",4,31.32,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","C49R Y66D D98V V115Q S164P Y178N T201S",7
"lib2","SARS-CoV-2","TTGATAAATTCCGACA",7,70.21,10.89,0.05,0.06,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGATAACATATGGAT",11,7.48,NA,NA,NA,NA,NA,NA,"stop","Y119T R127V S139M Y159*",4
"lib2","SARS-CoV-2","TTGATAACTGGTTGGA",6,41.89,8.15,-2.68,0.4,1.5,1.09,0.06,">1 nonsynonymous","T15R R124I P133L",3
"lib2","SARS-CoV-2","TTGATAAGATTGTACC",5,27.3,6,-4.84,2,1.5,1.18,0.05,">1 nonsynonymous","A22T V103W G166I T201Y",4
"lib2","SARS-CoV-2","TTGATAAGCATGTAGG",5,88.3,9.24,-1.59,0.04,2.95,1.08,0,"1 nonsynonymous","Y119D",1
"lib2","SARS-CoV-2","TTGATAAGCTAAAGGC",3,16.03,6,-4.84,2,1.5,1.17,0.05,">1 nonsynonymous","G101H E141N",2
"lib2","SARS-CoV-2","TTGATAATAACATACG",1,24.39,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","C6S N157C T170S",3
"lib2","SARS-CoV-2","TTGATAATACGAAATC",2,14.65,9.64,-1.19,0.11,2.7,1.08,0.01,">1 nonsynonymous","T46L N120T S129I",3
"lib2","SARS-CoV-2","TTGATAATTAAATCGG",5,72.89,9.57,-1.27,0.12,1.63,1.05,0.01,">1 nonsynonymous","W106G A192T",2
"lib2","SARS-CoV-2","TTGATAATTCATATTC",7,1.26,NA,NA,NA,NA,NA,NA,"stop","S36*",1
"lib2","SARS-CoV-2","TTGATACAAAAATCCT",2,4.33,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73W C102Y",2
"lib2","SARS-CoV-2","TTGATACAATACAATG",6,2.67,NA,NA,NA,NA,NA,NA,"stop","K94M F99* S184T T201N",4
"lib2","SARS-CoV-2","TTGATACAGAGCTGAG",2,49.77,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","S45W V103C E141L E154Y",4
"lib2","SARS-CoV-2","TTGATACCAGAAACGT",2,36.82,10.29,-0.54,0.08,2.81,1.11,0,">1 nonsynonymous","N24T L60F S184L",3
"lib2","SARS-CoV-2","TTGATACGAAGGAATT",2,12.09,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F99Y Q176R V182Y S200K",4
"lib2","SARS-CoV-2","TTGATACGAGCTAGAA",2,22.03,8.05,-2.78,0.22,2.66,1.11,0.02,">1 nonsynonymous","T15D S29E Y159V",3
"lib2","SARS-CoV-2","TTGATACGTAAAAAAG",3,62.29,8.42,-2.42,0.18,1.59,1.14,0.02,">1 nonsynonymous","G86S G117S N130P T148A",4
"lib2","SARS-CoV-2","TTGATACTCAATTTAT",1,0.14,NA,NA,NA,NA,NA,NA,"stop","D34I T148S P161V G172*",4
"lib2","SARS-CoV-2","TTGATACTGAGATTGA",2,26.51,9.91,-0.92,0.12,2.32,1.04,0.01,">1 nonsynonymous","V11T R27W A33L",3
"lib2","SARS-CoV-2","TTGATAGAACGGCCAA",2,55.47,9.02,-1.82,0.07,2.92,1.11,0,"1 nonsynonymous","L125R",1
"lib2","SARS-CoV-2","TTGATAGAATTTCTCT",9,12.6,6,-4.84,1.95,1.5,1.15,0,">1 nonsynonymous","V37Y P82H Y119S Y159W Q176R",5
"lib2","SARS-CoV-2","TTGATAGCAGTGGGTC",8,147.01,6,-4.84,1.56,1.5,1.14,0.01,"1 nonsynonymous","D112R",1
"lib2","SARS-CoV-2","TTGATAGGAAACAACC",4,67.51,8.62,-2.22,0.42,1.5,1,0.07,">1 nonsynonymous","C31S D90L Y121N",3
"lib2","SARS-CoV-2","TTGATAGGAACACTAT",3,4.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A89V",1
"lib2","SARS-CoV-2","TTGATAGGCATAAAGA",16,299.46,10.34,-0.49,0.03,2.94,1.02,0,">1 nonsynonymous","L38F E141P",2
"lib2","SARS-CoV-2","TTGATAGGCTAAGTCT",5,48.92,10.42,-0.41,0.05,2.88,1.08,0,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","TTGATAGGCTCTAAAG",2,15.65,8.3,-2.54,0.33,1.5,1,0.05,">1 nonsynonymous","N64P S69G K128A",3
"lib2","SARS-CoV-2","TTGATAGTAGACAGTG",2,21.09,9.76,-1.08,0.19,1.95,1.09,0.02,">1 nonsynonymous","G83D R136L",2
"lib2","SARS-CoV-2","TTGATAGTATCTGGGA",1,23.79,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","N107V R136C",2
"lib2","SARS-CoV-2","TTGATAGTTGGGTATC",3,52.36,10.87,0.03,0.05,3,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGATATACAGAAATA",8,111.66,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","T46F Q84M A105L L162P V173R",5
"lib2","SARS-CoV-2","TTGATATATTGATAGG",17,242.08,8.35,-2.49,0.09,2.37,1.07,0,">1 nonsynonymous","N4P S113R K199S",3
"lib2","SARS-CoV-2","TTGATATCACGTATGC",6,0.99,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y143E V181P",2
"lib2","SARS-CoV-2","TTGATATGATGATAGA",3,89.12,8.55,-2.29,0.1,2.11,1.09,0,">1 nonsynonymous","C31E G152V",2
"lib2","SARS-CoV-2","TTGATATGTGTATAGG",8,159.18,10.59,-0.25,0.03,3,1.02,0,"1 nonsynonymous","N4W",1
"lib2","SARS-CoV-2","TTGATATTATAGGGTG",4,28.22,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","S53F Q84L G146R L162S",4
"lib2","SARS-CoV-2","TTGATATTGTCTAATC",1,33.68,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7L D34V N40H F70R G86L D137C",6
"lib2","SARS-CoV-2","TTGATATTTCTTACCT",8,67.33,10.82,-0.02,0.05,2.97,1.05,0,">1 nonsynonymous","L38I P54A",2
"lib2","SARS-CoV-2","TTGATATTTGGCAACG",27,367.7,9.47,-1.37,0.02,2.89,1.08,0,">1 nonsynonymous","Y119H P149R",2
"lib2","SARS-CoV-2","TTGATCAAAAGCCTGT",12,65.55,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G101L R124H",2
"lib2","SARS-CoV-2","TTGATCAAAATACGAT",4,7.2,6.1,-4.74,0.9,3,1.12,0.02,">1 nonsynonymous","I88Y D98W Y123T T148C",4
"lib2","SARS-CoV-2","TTGATCAACATCTGAG",5,118.01,7.73,-3.1,0.18,1.5,1.04,0.01,"1 nonsynonymous","P161I",1
"lib2","SARS-CoV-2","TTGATCAAGAGTAAAA",9,48.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","R25L S41C",2
"lib2","SARS-CoV-2","TTGATCACCCGGTTGC",2,0.19,NA,NA,NA,NA,NA,NA,"stop","G83K Y91C N107D P133L C150*",5
"lib2","SARS-CoV-2","TTGATCATACGAAACC",2,0.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E S41L K114N S147P",4
"lib2","SARS-CoV-2","TTGATCATATAAACAT",9,70.84,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15V C61L D97P F167H Q176R",5
"lib2","SARS-CoV-2","TTGATCCAAATATACT",4,104.9,9.78,-1.05,0.12,2.08,1.08,0.01,">1 nonsynonymous","P54N V173S",2
"lib2","SARS-CoV-2","TTGATCCAACAAGTGC",12,111.65,6.59,-4.24,0.44,1.5,1.21,0.02,">1 nonsynonymous","I2S Y35W N64L F70H G146L N151S",6
"lib2","SARS-CoV-2","TTGATCCAAGCAGCAA",9,205.58,10.66,-0.18,0.04,2.89,1.11,0,"1 nonsynonymous","Q168S",1
"lib2","SARS-CoV-2","TTGATCCAATCCCTCA",12,280.07,10.78,-0.06,0.04,2.92,1.09,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","TTGATCCATTAATAAG",7,160.62,10.36,-0.48,0.04,2.93,1.09,0,">1 nonsynonymous","V32R K87N",2
"lib2","SARS-CoV-2","TTGATCCCATAATCAG",1,76.72,8,-2.84,0.15,2.47,1.13,0.01,">1 nonsynonymous","C61Q R78T Y175A",3
"lib2","SARS-CoV-2","TTGATCCGCCACCACG",1,24.62,8.61,-2.23,0.11,1.54,1.16,0.01,">1 nonsynonymous","C6L S45K N120S",3
"lib2","SARS-CoV-2","TTGATCCTACTGACGC",1,5.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23M F44L S113I",3
"lib2","SARS-CoV-2","TTGATCCTCAGAAAGC",4,0.92,NA,NA,NA,NA,NA,NA,"stop","Y39T Q84V G146* Q168M",4
"lib2","SARS-CoV-2","TTGATCGATGTAATAT",1,1.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G166M L188N",2
"lib2","SARS-CoV-2","TTGATCGGTATGTGGT",4,49.44,6,-4.84,2,3,1.18,0,">1 nonsynonymous","C6S K56S F70H N107A R136K",5
"lib2","SARS-CoV-2","TTGATCTCACCTGTCC",1,25.85,10.87,0.03,0.05,2.91,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGATGAAACCACCAT",6,53.82,10.83,0,0.05,3,1,0,"1 nonsynonymous","S53R",1
"lib2","SARS-CoV-2","TTGATGAAACTCGTAT",3,2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62C I80L Y93V K114R I138R",5
"lib2","SARS-CoV-2","TTGATGAAGATGACCA",7,51.55,8.93,-1.91,0.1,1.92,1.05,0,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","TTGATGACCCGGGCTT",4,9.4,6,-4.84,2,1.5,1.2,0.04,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TTGATGACTTGGTAAC",3,70.04,9.09,-1.75,0.1,2.18,1.06,0,">1 nonsynonymous","P7H I28W V37G L60C G152V",5
"lib2","SARS-CoV-2","TTGATGAGACAGGCTT",3,0.67,NA,NA,NA,NA,NA,NA,"stop","N40I K56Q N107* I138C",4
"lib2","SARS-CoV-2","TTGATGATGCCTCATA",7,79.23,7.96,-2.88,0.11,1.83,1.08,0,">1 nonsynonymous","E10A G146L T201S",3
"lib2","SARS-CoV-2","TTGATGATGGAAACTC",1,73.91,10.48,-0.36,0.05,2.97,1.04,0,"1 nonsynonymous","F62G",1
"lib2","SARS-CoV-2","TTGATGATTTTTCTGC",2,9.75,6.04,-4.8,2,3,1.18,0.07,">1 nonsynonymous","N13R S108F T148I",3
"lib2","SARS-CoV-2","TTGATGCAGTATGAAA",2,41.24,9.69,-1.15,0.17,2.5,1,0.01,">1 nonsynonymous","Y39M Y121T",2
"lib2","SARS-CoV-2","TTGATGCCATACAATT",4,8.57,6.44,-4.39,0.33,1.74,1.03,0.01,">1 nonsynonymous","C61F N120D R136V I142Q",4
"lib2","SARS-CoV-2","TTGATGCCGATACAGT",6,55.38,7.74,-3.1,0.44,1.5,1,0.07,">1 nonsynonymous","L38F K87D F99N",3
"lib2","SARS-CoV-2","TTGATGCGGCTAATTC",2,57.59,9.91,-0.93,0.1,2.18,1.06,0,"1 nonsynonymous","F8S",1
"lib2","SARS-CoV-2","TTGATGCTACAAAACC",6,26.04,7.69,-3.14,0.45,1.5,1.04,0.06,">1 nonsynonymous","N4T G83V A89L A105K E154L S184P",6
"lib2","SARS-CoV-2","TTGATGCTGTAAACAA",5,21.82,6,-4.84,2,3,1.26,0.02,">1 nonsynonymous","V20N S29R N92M T140I",4
"lib2","SARS-CoV-2","TTGATGGATCGATTTT",4,34.81,7.18,-3.66,0.4,1.5,1.03,0.06,">1 nonsynonymous","Y143D Y178L",2
"lib2","SARS-CoV-2","TTGATGGCGTCAATTG",14,45.42,8.98,-1.85,0.12,1.91,1.07,0.01,">1 nonsynonymous","N13C L60P",2
"lib2","SARS-CoV-2","TTGATGGCTTATACAC",6,258.86,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y119D Q163N Y175N",3
"lib2","SARS-CoV-2","TTGATGGTTAGATAAA",2,75.85,10.28,-0.55,0.04,2.75,1.04,0,"1 nonsynonymous","R136Y",1
"lib2","SARS-CoV-2","TTGATGTGTCTTACCA",2,116.02,9.98,-0.85,0.06,2.65,1.03,0,">1 nonsynonymous","A18W A42T G83Y",3
"lib2","SARS-CoV-2","TTGATGTTTAACCTAA",9,236.99,10.11,-0.73,0.06,2.55,1.05,0,">1 nonsynonymous","S108G N120A K198Y",3
"lib2","SARS-CoV-2","TTGATTAACTTCAATT",10,250.59,10.57,-0.26,0.03,2.93,1.03,0,">1 nonsynonymous","N1D D59G G152K",3
"lib2","SARS-CoV-2","TTGATTAAGATGGGTA",16,83.61,6,-4.84,2,3,1.18,0,">1 nonsynonymous","N64T F99S",2
"lib2","SARS-CoV-2","TTGATTACACCACGAT",4,63.22,10.87,0.03,0.05,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGATTACGTTAAAGG",3,0.07,NA,NA,NA,NA,NA,NA,"stop","A14R Y39* Q176M",3
"lib2","SARS-CoV-2","TTGATTACTAGTCAAG",16,1.99,NA,NA,NA,NA,NA,NA,"stop","S45V C61* Q163*",3
"lib2","SARS-CoV-2","TTGATTACTCAATCAT",1,10.35,10.17,-0.67,0.14,2.8,1.05,0.01,">1 nonsynonymous","R27T K56A A89V",3
"lib2","SARS-CoV-2","TTGATTACTGACACTC",5,95.37,8.76,-2.07,0.3,1.5,1,0.04,">1 nonsynonymous","N1L K56V P96Q T100K",4
"lib2","SARS-CoV-2","TTGATTATGTCTTAAA",4,3.44,NA,NA,NA,NA,NA,NA,"stop","L125A D137*",2
"lib2","SARS-CoV-2","TTGATTCCAAGAAAAG",2,26.19,6,-4.84,1.39,1.5,1.15,0.01,">1 nonsynonymous","A89I A105L P149N N171K T201W",5
"lib2","SARS-CoV-2","TTGATTCCGAATTTCA",4,41.84,10.87,0.03,0.05,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGATTGACCTTATTT",7,33.31,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","F62S Y121P K132A E154S N171I",5
"lib2","SARS-CoV-2","TTGATTGCCTGACACT",8,125.62,10.78,-0.06,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGATTTACAGCAAAT",5,100.07,10.84,0,0.04,2.94,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGATTTAGGACTTAG",1,3.01,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P96E",1
"lib2","SARS-CoV-2","TTGATTTATATACCCT",4,61.75,10.17,-0.67,0.06,2.85,1.08,0,">1 nonsynonymous","Y39M G116W G155K",3
"lib2","SARS-CoV-2","TTGATTTATCATGAAA",4,41.87,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","P82L G117Y S139C",3
"lib2","SARS-CoV-2","TTGATTTATGGCTAAG",9,76.43,10.19,-0.64,0.04,2.84,1.17,0,">1 nonsynonymous","S43I N118Q S164Q",3
"lib2","SARS-CoV-2","TTGATTTCCGGGTAAC",2,2.66,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61S I80L S184Q T193R",4
"lib2","SARS-CoV-2","TTGATTTCTTCATATT",8,41.01,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","F62L N151M L162S F167D",4
"lib2","SARS-CoV-2","TTGATTTGCATCGCTA",14,2.65,NA,NA,NA,NA,NA,NA,"stop","F12* N157S",2
"lib2","SARS-CoV-2","TTGCAAAACCCAGAGG",2,24.62,9.62,-1.22,0.11,2.75,1.14,0.01,">1 nonsynonymous","N110I T170F",2
"lib2","SARS-CoV-2","TTGCAAAACTTTATAC",6,49.72,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","W23K Y159Q Y175V",3
"lib2","SARS-CoV-2","TTGCAAAATAGATGAT",3,28.66,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","R16Q Y93A F99N W106S G146W V153C",6
"lib2","SARS-CoV-2","TTGCAAAATCATCGGT",17,2.7,NA,NA,NA,NA,NA,NA,"stop","D59M G152* T170M",3
"lib2","SARS-CoV-2","TTGCAAAATCTGGTTA",4,54.27,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S129N G172H",2
"lib2","SARS-CoV-2","TTGCAAACAATTGTCC",17,212.05,10.01,-0.83,0.05,2.89,1.03,0,">1 nonsynonymous","N4L T170W",2
"lib2","SARS-CoV-2","TTGCAAACCCCAACCC",11,8.64,6,-4.84,2,1.5,1.07,0.06,">1 nonsynonymous","T15M V103K D112A N157T T201P",5
"lib2","SARS-CoV-2","TTGCAAACTTCACTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T15L Y50D I80T P96H V181*",5
"lib2","SARS-CoV-2","TTGCAAAGAAAAACCA",1,1.09,NA,NA,NA,NA,NA,NA,"stop","G51L T63G C150* F160Y",4
"lib2","SARS-CoV-2","TTGCAAAGAATGTTAT",11,6.53,NA,NA,NA,NA,NA,NA,"stop","L5M G9H C61* N120V K128F",5
"lib2","SARS-CoV-2","TTGCAAAGACTGACTT",2,95.38,6.48,-4.36,0.12,2.15,1.1,0,">1 nonsynonymous","K56S C150F",2
"lib2","SARS-CoV-2","TTGCAAAGCAAACAAG",9,6.4,8.59,-2.25,0.29,2.55,1.48,0.02,">1 nonsynonymous","S43V L131S",2
"lib2","SARS-CoV-2","TTGCAAATTACCTTTG",3,33.1,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","F12V A22W C31M E141L C150M",5
"lib2","SARS-CoV-2","TTGCAACCCTTTATCG",5,15.52,7.76,-3.07,0.2,1.95,1.05,0.01,">1 nonsynonymous","N13Y D59E N107D T201I",4
"lib2","SARS-CoV-2","TTGCAACCTTGTTGAA",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAACGCCTCCACG",5,0.16,NA,NA,NA,NA,NA,NA,"stop","V37N V77* K198R",3
"lib2","SARS-CoV-2","TTGCAACTAACCCCTT",3,54.69,10.69,-0.15,0.07,2.92,1.09,0,">1 nonsynonymous","I2H V37N C195K",3
"lib2","SARS-CoV-2","TTGCAACTTGGACTTA",1,36.98,10.15,-0.68,0.06,2.78,1.2,0,">1 nonsynonymous","L60T P169R",2
"lib2","SARS-CoV-2","TTGCAAGAATCTTAGG",5,83.06,9.35,-1.48,0.06,1.98,1.06,0,"1 nonsynonymous","I28R",1
"lib2","SARS-CoV-2","TTGCAAGAGAAATACG",1,0,NA,NA,NA,NA,NA,NA,"stop","V77S P82* P169L",3
"lib2","SARS-CoV-2","TTGCAAGCCCTTGCGC",6,148.42,10.85,0.01,0.04,2.96,1.05,0,">1 nonsynonymous","R27S N130R",2
"lib2","SARS-CoV-2","TTGCAAGCTAAATTAA",2,25.79,10.8,-0.04,0.06,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAAGCTCTTGCTT",3,17.7,10.37,-0.47,0.09,2.91,1.03,0,"1 nonsynonymous","F167Y",1
"lib2","SARS-CoV-2","TTGCAAGGTCTTGGGA",5,48.07,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F12G S129L V180C",3
"lib2","SARS-CoV-2","TTGCAAGTAATTCCAC",8,101.43,10.76,-0.08,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAAGTCCAACATA",1,16.86,10.8,-0.03,0.1,2.88,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAAGTGTGGCTTG",2,93.33,9.98,-0.86,0.1,2.4,1.05,0,">1 nonsynonymous","V37T A89I",2
"lib2","SARS-CoV-2","TTGCAATAAGACTCTA",6,126.11,10.88,0.04,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAATAAGACTGCG",1,8.2,6,-4.84,2,1.5,1,0,">1 nonsynonymous","L60S D90W I104S S139E G155H",5
"lib2","SARS-CoV-2","TTGCAATAATTTTCAA",8,80.85,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y91D T100S",2
"lib2","SARS-CoV-2","TTGCAATCCGAAGTGC",5,117.92,10.76,-0.08,0.05,2.89,1.11,0,"1 nonsynonymous","S147A",1
"lib2","SARS-CoV-2","TTGCAATCGCAGGGAG",6,113.5,9.09,-1.75,0.13,1.5,1.08,0.01,">1 nonsynonymous","N30D P54T N120L V180T",4
"lib2","SARS-CoV-2","TTGCACAAATTTCCCT",1,5.25,NA,NA,NA,NA,NA,NA,"stop","P96*",1
"lib2","SARS-CoV-2","TTGCACAGAAAAATAT",1,15.4,9.75,-1.09,0.1,2.31,1,0,">1 nonsynonymous","S41V V65Q S139T",3
"lib2","SARS-CoV-2","TTGCACAGTCATTGAA",2,17.03,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","S43Y C61H G101Y S113D",4
"lib2","SARS-CoV-2","TTGCACATATGTGCCT",5,105.64,10.19,-0.65,0.04,2.75,1.02,0,"1 nonsynonymous","P133V",1
"lib2","SARS-CoV-2","TTGCACATGTCAATAG",3,73.69,7.02,-3.81,0.29,1.5,1.1,0.02,">1 nonsynonymous","C6Y S36R N118E V153S Q176N",5
"lib2","SARS-CoV-2","TTGCACATTTGGCAAT",6,126.88,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y35F A42M F62S P133F A145W L162R",6
"lib2","SARS-CoV-2","TTGCACCAACTCATAA",1,45.65,8.84,-2,0.17,1.65,1.17,0.01,">1 nonsynonymous","S19T R27C D90N",3
"lib2","SARS-CoV-2","TTGCACCAATCTAAGG",7,35.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","F8H E10A T63S K87N D98Y S129I",6
"lib2","SARS-CoV-2","TTGCACCATATAACGC",2,49.48,9.63,-1.21,0.06,2.78,1.05,0,">1 nonsynonymous","R16K Y39F P82S K87V V173L A190E",6
"lib2","SARS-CoV-2","TTGCACCGCTATATAT",2,82.28,10.68,-0.16,0.08,2.89,1.1,0,"1 nonsynonymous","G9N",1
"lib2","SARS-CoV-2","TTGCACCTAGAATAGC",3,58.47,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","P7K Y21K D75G N107V",4
"lib2","SARS-CoV-2","TTGCACGAACACAACC",10,117.29,9,-1.84,0.3,1.5,1,0.04,">1 nonsynonymous","N4M F12R",2
"lib2","SARS-CoV-2","TTGCACGCAACCTTGC",3,0,NA,NA,NA,NA,NA,NA,"stop","F8* I88V",2
"lib2","SARS-CoV-2","TTGCACGCCGGAGACA",1,97.81,10.04,-0.8,0.1,2.45,1.03,0,">1 nonsynonymous","D34Q G51R Q84T",3
"lib2","SARS-CoV-2","TTGCACGCGAGTTCTA",4,4.84,NA,NA,NA,NA,NA,NA,"stop","C49D N64K I80* P169T",4
"lib2","SARS-CoV-2","TTGCACGCTGATCAAA",3,60.34,8.83,-2.01,0.09,1.96,1.09,0,">1 nonsynonymous","A105M K114D P149T",3
"lib2","SARS-CoV-2","TTGCACGGACGCCACG",1,0.14,NA,NA,NA,NA,NA,NA,"stop","Y21* V65L G117A E154Y F167T L187Q K199N",7
"lib2","SARS-CoV-2","TTGCACTATACCACTG",3,9.5,10.68,-0.15,0.16,2.63,1.39,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTGCACTCATATATCA",12,156.32,8.13,-2.71,0.17,2,1.07,0.01,">1 nonsynonymous","S41R G116W G155P",3
"lib2","SARS-CoV-2","TTGCACTTCGAAGACT",1,0,NA,NA,NA,NA,NA,NA,"stop","I28W C61L K87*",3
"lib2","SARS-CoV-2","TTGCAGAAAACGGTCT",1,4.77,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K48Y Y93S N107Y I142L",4
"lib2","SARS-CoV-2","TTGCAGAACCTAATAA",5,37.11,6.08,-4.76,1.93,1.5,1.29,0.06,">1 nonsynonymous","T55G V103W",2
"lib2","SARS-CoV-2","TTGCAGACGAATGCAA",8,35.23,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","D90A G101L",2
"lib2","SARS-CoV-2","TTGCAGACTTGATAAT",2,82.53,10.89,0.05,0.05,2.98,1.05,0,"1 nonsynonymous","N1D",1
"lib2","SARS-CoV-2","TTGCAGAGTAGAACAA",6,0.59,NA,NA,NA,NA,NA,NA,"stop","W106E G117L F126*",3
"lib2","SARS-CoV-2","TTGCAGCAAGGTCTAT",4,2.85,NA,NA,NA,NA,NA,NA,"stop","S36* G51E F62G Y91N D98V E135* P149H",7
"lib2","SARS-CoV-2","TTGCAGCCCAGCCCAG",5,54.19,8.15,-2.68,0.15,2.15,1.1,0.01,">1 nonsynonymous","T46L T55W L122S G146P T201V",5
"lib2","SARS-CoV-2","TTGCAGCCCCTAGATT",4,0.66,NA,NA,NA,NA,NA,NA,"stop","G9S R27T G83*",3
"lib2","SARS-CoV-2","TTGCAGCTAACCTGCG",2,33.36,11.06,0.22,0.05,2.93,1.07,0,">1 nonsynonymous","N1Q E154K",2
"lib2","SARS-CoV-2","TTGCAGCTCCCTTACG",5,275.42,10.76,-0.08,0.03,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCAGGGTGGTATTA",8,169.95,9.54,-1.29,0.06,2.87,1.08,0,"1 nonsynonymous","A145L",1
"lib2","SARS-CoV-2","TTGCAGGTATATAAAC",1,7.34,NA,NA,NA,NA,NA,0.36,">1 nonsynonymous","I2R N30Q Y39V S45Y R136F Y159L",6
"lib2","SARS-CoV-2","TTGCAGGTGAAGCAGG",12,66.83,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","T3W Y93V",2
"lib2","SARS-CoV-2","TTGCAGTAAAATTCGA",12,53.05,6.01,-4.82,0.65,1.5,1.12,0.01,">1 nonsynonymous","G9M I28F V52R Y178P",4
"lib2","SARS-CoV-2","TTGCAGTACATTACAA",5,79.16,10.05,-0.78,0.07,2.62,1.1,0,">1 nonsynonymous","Y21H E135D",2
"lib2","SARS-CoV-2","TTGCAGTTATTACTTG",9,153.15,9.21,-1.63,0.11,1.6,1.12,0.01,">1 nonsynonymous","G9R V173T",2
"lib2","SARS-CoV-2","TTGCATAAATACTTAT",14,144.6,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","A22L N40T Y143A",3
"lib2","SARS-CoV-2","TTGCATAAATCCCGAA",2,25.11,10.74,-0.09,0.05,2.87,1.15,0,"1 nonsynonymous","A190F",1
"lib2","SARS-CoV-2","TTGCATACATAGCTAA",4,30.17,6,-4.84,2,3,1.07,0,">1 nonsynonymous","F12G Y123C G152A G166L",4
"lib2","SARS-CoV-2","TTGCATAGAAAATTAA",6,38.13,8.59,-2.25,0.3,1.5,1.18,0.03,">1 nonsynonymous","E10W T63G G83S Y121F E141D",5
"lib2","SARS-CoV-2","TTGCATAGCATAAATA",7,77.06,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R27L A89K G146M C150R",4
"lib2","SARS-CoV-2","TTGCATATATACGATG",3,0.88,NA,NA,NA,NA,NA,NA,"stop","R73I L95H I138*",3
"lib2","SARS-CoV-2","TTGCATATCTAATCAA",6,83.35,10.92,0.08,0.04,2.92,1.1,0,">1 nonsynonymous","Y39T L122M",2
"lib2","SARS-CoV-2","TTGCATATTAAAACGA",2,85.21,10.65,-0.19,0.05,2.87,1.1,0,">1 nonsynonymous","I2H Y39E K56L N64S",4
"lib2","SARS-CoV-2","TTGCATATTATGCTGG",9,130.81,8.78,-2.06,0.16,1.5,1.14,0.01,">1 nonsynonymous","E10M D59I Y91L",3
"lib2","SARS-CoV-2","TTGCATCCCCATCCCA",8,121.49,6,-4.84,1.39,1.5,1.14,0.01,">1 nonsynonymous","G116P C150A",2
"lib2","SARS-CoV-2","TTGCATCTTCTCATCA",9,66.31,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R25V C150G",2
"lib2","SARS-CoV-2","TTGCATGTAAAACGAA",2,18.23,10.81,-0.02,0.12,2.94,1.1,0.01,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","TTGCATGTCGCAGAAG",1,7.75,10.87,0.03,0.15,2.94,1.05,0.01,"1 nonsynonymous","C61G",1
"lib2","SARS-CoV-2","TTGCATTAAGCGAATT",7,92.68,10.37,-0.47,0.04,3,1.03,0,"1 nonsynonymous","F156I",1
"lib2","SARS-CoV-2","TTGCATTAATTAGATC",7,141.46,10.11,-0.72,0.06,2.38,1.06,0,"1 nonsynonymous","A89H",1
"lib2","SARS-CoV-2","TTGCATTACTCGTAAA",5,63.62,10.84,0.01,0.03,2.97,1.05,0,"1 nonsynonymous","T148V",1
"lib2","SARS-CoV-2","TTGCATTAGACAGCAG",1,77.29,10.71,-0.13,0.05,2.92,1.11,0,">1 nonsynonymous","K56T P191N",2
"lib2","SARS-CoV-2","TTGCATTAGCGCTACT",3,68.05,10.42,-0.41,0.06,2.73,1.07,0,">1 nonsynonymous","F134T Q163Y",2
"lib2","SARS-CoV-2","TTGCATTATCCCTATA",8,1.73,NA,NA,NA,NA,NA,NA,"stop","L5P P161*",2
"lib2","SARS-CoV-2","TTGCATTATGTAACTT",4,67.53,10.77,-0.07,0.04,2.91,1.1,0,"1 nonsynonymous","N4P",1
"lib2","SARS-CoV-2","TTGCATTCAAAAGACC",10,118.32,10.86,0.03,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCATTCTAGAACGC",5,59.23,10.77,-0.07,0.04,2.92,1.06,0,"1 nonsynonymous","S184V",1
"lib2","SARS-CoV-2","TTGCATTGGAGATTAG",3,28.04,10.71,-0.13,0.05,2.98,1,0,">1 nonsynonymous","Y39S D90K",2
"lib2","SARS-CoV-2","TTGCATTTGGAAGTAC",5,133.73,10.8,-0.03,0.05,2.93,1.09,0,"1 nonsynonymous","S53V",1
"lib2","SARS-CoV-2","TTGCCAACACCTACAC",8,90.44,9.22,-1.61,0.09,1.97,1.05,0,">1 nonsynonymous","C6L N30Q T55C",3
"lib2","SARS-CoV-2","TTGCCAACCCAGTTCC",9,156.36,10.14,-0.7,0.04,2.94,1.06,0,">1 nonsynonymous","G9T F156S",2
"lib2","SARS-CoV-2","TTGCCAACGTTTTGAA",3,41.72,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","K26R T63P G172C",3
"lib2","SARS-CoV-2","TTGCCAATCGCCTTAA",8,39.3,6,-4.84,2,1.5,1.27,0.06,">1 nonsynonymous","K48A A89L P96L D98W A145L",5
"lib2","SARS-CoV-2","TTGCCACAAGAGTCTC",2,7.77,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","N1E C31Y W106Q F160L",4
"lib2","SARS-CoV-2","TTGCCACACATAGGCC",4,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41R I104S L125R F134T",4
"lib2","SARS-CoV-2","TTGCCACATGCAAACG",8,88.25,10.56,-0.27,0.04,2.87,1.08,0,">1 nonsynonymous","Y39F A81M",2
"lib2","SARS-CoV-2","TTGCCACCCAATCTAT",2,31.02,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","N58P G117S L183S",3
"lib2","SARS-CoV-2","TTGCCACCCTACAAAA",5,2.44,NA,NA,NA,NA,NA,NA,"stop","L38*",1
"lib2","SARS-CoV-2","TTGCCACCTTCCACGT",8,42.31,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","N1I V20K D59S K114Q N120R R179A",6
"lib2","SARS-CoV-2","TTGCCACTATCACCTT",4,0,NA,NA,NA,NA,NA,NA,"stop","T3L Q84H P149*",3
"lib2","SARS-CoV-2","TTGCCAGAAGAAACCA",2,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N24F T170Y",2
"lib2","SARS-CoV-2","TTGCCAGGAGATCAAA",9,78.32,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","I80Q L95K L131R K198Y",4
"lib2","SARS-CoV-2","TTGCCATACCTCGACC",6,85.27,6.65,-4.19,0.26,1.5,1.14,0.01,">1 nonsynonymous","C31E K56G D59S A89T N120L",5
"lib2","SARS-CoV-2","TTGCCATCGAAACGGA",10,62.77,6,-4.84,2,1.5,1.24,0.01,"1 nonsynonymous","R124V",1
"lib2","SARS-CoV-2","TTGCCCAACCAGACGA",1,36.01,10.56,-0.27,0.05,2.98,1.03,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","TTGCCCACTTACAATG",1,20.27,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","F12R F47S L162H K198Y T201A",5
"lib2","SARS-CoV-2","TTGCCCAGTAAACCTA",8,80.59,10.39,-0.45,0.06,2.93,1.07,0,">1 nonsynonymous","V32D S45N",2
"lib2","SARS-CoV-2","TTGCCCATAAATGATA",7,75.25,9.88,-0.95,0.12,2.23,1.03,0.01,"1 nonsynonymous","F12A",1
"lib2","SARS-CoV-2","TTGCCCATGTTTATCT",8,51.51,8.64,-2.19,0.29,1.5,1.05,0.04,">1 nonsynonymous","F12P S45P",2
"lib2","SARS-CoV-2","TTGCCCCCTGAGTAAA",1,5.29,9.52,-1.32,0.43,1.5,1,0.07,">1 nonsynonymous","W23F Q84R A105V",3
"lib2","SARS-CoV-2","TTGCCCCGCGTACCAG",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S43M N58S A105H",3
"lib2","SARS-CoV-2","TTGCCCCTCATATTCA",8,38.68,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","Y39S F62E Y93H S139Y",4
"lib2","SARS-CoV-2","TTGCCCCTTCTAAGAG",1,42.27,7.66,-3.18,0.11,1.76,1.05,0,">1 nonsynonymous","D34A K87E Y119S",3
"lib2","SARS-CoV-2","TTGCCCGCAGTAATAA",7,93.13,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D90M R179M",2
"lib2","SARS-CoV-2","TTGCCCTACAGCTGAA",8,34.59,6,-4.84,2,1.5,1.22,0.04,">1 nonsynonymous","V71E P82Q N151F G174T",4
"lib2","SARS-CoV-2","TTGCCCTCAGATCTGT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63L N109Y Y121P V173P",4
"lib2","SARS-CoV-2","TTGCCGAATAACTAGT",2,19.66,6,-4.84,0.73,2.19,1.08,0.01,">1 nonsynonymous","S43N D68G",2
"lib2","SARS-CoV-2","TTGCCGAATTTGATAA",8,116.2,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","S19L F62P Y119G P161F",4
"lib2","SARS-CoV-2","TTGCCGACCATATGCG",2,15.31,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","F44R I142D F167I",3
"lib2","SARS-CoV-2","TTGCCGACCCGACTAA",6,38.87,9.98,-0.86,0.12,2.02,1.08,0.01,">1 nonsynonymous","K26M V52S A190L",3
"lib2","SARS-CoV-2","TTGCCGAGAATACAGT",3,22.89,10.62,-0.21,0.08,2.84,1.13,0,">1 nonsynonymous","E10V T100I T140S",3
"lib2","SARS-CoV-2","TTGCCGAGTACGGCCA",15,233.2,9.29,-1.55,0.03,2.94,1.08,0,">1 nonsynonymous","S36K G166Q",2
"lib2","SARS-CoV-2","TTGCCGATCAGCACTG",1,13.92,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S19T W106S F134L T140C",4
"lib2","SARS-CoV-2","TTGCCGCAAACCATCG",1,4.64,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P L122T K128E",3
"lib2","SARS-CoV-2","TTGCCGCCATCAATCT",2,32.13,6,-4.84,2,3,1.2,0,">1 nonsynonymous","S45Y C61R Y93S S184R",4
"lib2","SARS-CoV-2","TTGCCGCGAACCCCAA",12,60.53,7.73,-3.1,0.24,1.5,1.08,0.02,">1 nonsynonymous","T15G A18W G146T",3
"lib2","SARS-CoV-2","TTGCCGGAGACGCTTT",1,21.61,9.9,-0.94,0.11,2.92,1.02,0.01,">1 nonsynonymous","E10N K114S N120L",3
"lib2","SARS-CoV-2","TTGCCGGTAAGGTTAT",3,39.97,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","T55F C158P G166E",3
"lib2","SARS-CoV-2","TTGCCGGTATAATCGC",7,115.67,10.87,0.03,0.06,2.83,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCCGTAGGAAGCAG",8,0.56,NA,NA,NA,NA,NA,NA,"stop","Y50K D59G D112F P197*",4
"lib2","SARS-CoV-2","TTGCCGTTCTCCAGGT",7,169.43,10.7,-0.14,0.03,2.97,1.05,0,"1 nonsynonymous","G9F",1
"lib2","SARS-CoV-2","TTGCCTAAAGAAAACG",8,282.05,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5C I88D N107L G116V",4
"lib2","SARS-CoV-2","TTGCCTAAATACACCC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1Q A14V N64Y D68N G86S V103M K199T",7
"lib2","SARS-CoV-2","TTGCCTAAGCGTGCTG",9,40.88,9.52,-1.32,0.08,1.76,1.08,0,">1 nonsynonymous","D98A Q163L V173S A190C",4
"lib2","SARS-CoV-2","TTGCCTAATCCTTACA",6,36.57,9.86,-0.97,0.1,2.04,1,0,">1 nonsynonymous","P133L S184A",2
"lib2","SARS-CoV-2","TTGCCTAATGACTCCA",1,47.85,9.91,-0.93,0.05,2.88,1.03,0,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","TTGCCTAGATACCTAC",13,234.75,10.56,-0.27,0.03,2.96,1.07,0,">1 nonsynonymous","C61Y I142V",2
"lib2","SARS-CoV-2","TTGCCTAGCGCGCAAC",10,34.58,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F44G I72V P82M C102L F156D H189N",6
"lib2","SARS-CoV-2","TTGCCTATAAACTTGT",6,24.3,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","V37A E76G I104N E135Y",4
"lib2","SARS-CoV-2","TTGCCTATAAATAATA",1,0.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13Y Y39M L183S",3
"lib2","SARS-CoV-2","TTGCCTATTCGTCAAG",6,44.79,6.18,-4.66,0.81,1.5,1.15,0.02,">1 nonsynonymous","L5S F17L P133L",3
"lib2","SARS-CoV-2","TTGCCTCAAACCAAGC",2,22.43,10.32,-0.51,0.12,2.76,1.03,0.01,">1 nonsynonymous","P7L D34N",2
"lib2","SARS-CoV-2","TTGCCTCAAATGGTTT",5,27.24,10.34,-0.49,0.07,2.82,1.18,0,">1 nonsynonymous","F47V D98S",2
"lib2","SARS-CoV-2","TTGCCTCAATAGGAGG",12,15.32,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","A14V F47T F99T V103T V181G A190E",6
"lib2","SARS-CoV-2","TTGCCTCATATACAAG",5,15.76,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","G152F V173A",2
"lib2","SARS-CoV-2","TTGCCTCATGACGGAA",3,37.88,6.65,-4.19,0.47,1.5,1.18,0.02,">1 nonsynonymous","S19Y G83C L122S K128F",4
"lib2","SARS-CoV-2","TTGCCTCCTAGTACAA",1,8.92,6.47,-4.37,0.86,3,1.18,0.01,">1 nonsynonymous","G9A N13R G74Y K94N A105L",5
"lib2","SARS-CoV-2","TTGCCTCGCAGACCAC",16,159.21,10.8,-0.04,0.04,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCCTCTAATTGAAA",8,193.82,9.97,-0.87,0.03,2.88,1.05,0,">1 nonsynonymous","Y35A A42S E141T V173A",4
"lib2","SARS-CoV-2","TTGCCTCTTCGGTACC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A105V K128W",2
"lib2","SARS-CoV-2","TTGCCTGAACGCAAAT",6,76.46,10.55,-0.28,0.04,2.98,1.05,0,">1 nonsynonymous","I2L C61L N151S",3
"lib2","SARS-CoV-2","TTGCCTGATACTGAAA",11,136.98,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","S36M A89M Q144I C150R T201L",5
"lib2","SARS-CoV-2","TTGCCTGATCTTGACA",1,12.11,6.2,-4.63,0.56,3,1.14,0.01,">1 nonsynonymous","F17S S69I G101L S139R E154F",5
"lib2","SARS-CoV-2","TTGCCTGTATCTTGAT",1,30.8,9,-1.84,0.08,2.9,1.12,0,">1 nonsynonymous","V32M Q168C",2
"lib2","SARS-CoV-2","TTGCCTGTCGTGCAAA",5,60.16,9.12,-1.72,0.05,2.72,1.07,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TTGCCTTATGTGTTAT",10,130.3,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V11Y Y35G D112N",3
"lib2","SARS-CoV-2","TTGCCTTCCCCATCGT",8,28.18,10.4,-0.43,0.07,2.93,1.04,0,">1 nonsynonymous","I2T C61W N110M P149S",4
"lib2","SARS-CoV-2","TTGCCTTGACGAACCA",1,103.79,10.3,-0.54,0.03,3,1,0,">1 nonsynonymous","Y35L G51T N130Y",3
"lib2","SARS-CoV-2","TTGCGAACAACTGTGA",3,2.55,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F167T",1
"lib2","SARS-CoV-2","TTGCGAACGGGCAATA",4,2.82,NA,NA,NA,NA,NA,NA,"stop","P7* S41Y S45F N107S D112Y G174F",6
"lib2","SARS-CoV-2","TTGCGACATTTCCACC",1,44.78,10.87,0.03,0.07,2.81,1.19,0,"1 nonsynonymous","F8L",1
"lib2","SARS-CoV-2","TTGCGACCAAACTGAT",7,99.27,10.23,-0.6,0.04,2.85,1.05,0,">1 nonsynonymous","A81V T148N",2
"lib2","SARS-CoV-2","TTGCGACCCGATAACT",15,3.18,NA,NA,NA,NA,NA,NA,"stop","G9R I80* P96T N107M K132Q P149Q Y165N",7
"lib2","SARS-CoV-2","TTGCGACGGGGACTCT",2,8.09,10.57,-0.27,0.11,2.91,1.17,0,">1 nonsynonymous","I2R E141R",2
"lib2","SARS-CoV-2","TTGCGAGAATACAACG",5,11.09,6.79,-4.05,0.6,1.5,1.02,0.05,">1 nonsynonymous","S43G I80Y D97N V103K Y121G K132G G155L V181R",8
"lib2","SARS-CoV-2","TTGCGAGCTTACTATA",9,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K W106L K128C G196R",4
"lib2","SARS-CoV-2","TTGCGAGTATCAACTA",9,64.84,7.87,-2.97,0.17,1.5,1.12,0.01,">1 nonsynonymous","L60R S113V Y119R I142L",4
"lib2","SARS-CoV-2","TTGCGATAAACTAAGG",1,0.53,NA,NA,NA,NA,NA,NA,"stop","C61*",1
"lib2","SARS-CoV-2","TTGCGATACTATATAA",2,8.09,NA,NA,NA,NA,NA,0.24,">1 nonsynonymous","N40V G83N W106A",3
"lib2","SARS-CoV-2","TTGCGATCAACGTAAC",12,86.28,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N4G V37Y Y50T T55L K94Y",5
"lib2","SARS-CoV-2","TTGCGATCTACCCGGG",1,26.67,10.77,-0.07,0.08,2.91,1.07,0,">1 nonsynonymous","S43P G155T V173L",3
"lib2","SARS-CoV-2","TTGCGATGATCAGTTA",5,81.02,8.25,-2.58,0.25,1.5,1.03,0.02,">1 nonsynonymous","A105L F160D",2
"lib2","SARS-CoV-2","TTGCGATTAACCACAG",2,22.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F47I L57G F167Q",3
"lib2","SARS-CoV-2","TTGCGATTCCTCCTAT",10,402.81,10.85,0.02,0.03,2.95,1.06,0,"1 nonsynonymous","S147T",1
"lib2","SARS-CoV-2","TTGCGATTTGAGATAC",4,14.33,6,-4.84,2,1.5,1.24,0.04,"1 nonsynonymous","I104E",1
"lib2","SARS-CoV-2","TTGCGCAAAAGGGCTG",8,108.65,10.65,-0.19,0.03,2.97,1.04,0,">1 nonsynonymous","V37R C61F",2
"lib2","SARS-CoV-2","TTGCGCAACCGTTTAG",1,8.88,10.15,-0.69,0.17,2.4,1.25,0.01,">1 nonsynonymous","K48C K87V K132I S184Y",4
"lib2","SARS-CoV-2","TTGCGCAGAACTCACA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1T V20T N118I",3
"lib2","SARS-CoV-2","TTGCGCCATAGTCAAA",4,33.22,9.61,-1.22,0.37,1.5,1,0.06,">1 nonsynonymous","S36T T46A T100G",3
"lib2","SARS-CoV-2","TTGCGCGGCTTTACAG",3,26.33,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","A81K I88M G117S S129A P149R",5
"lib2","SARS-CoV-2","TTGCGCTTAAGAAGAG",3,40.27,6,-4.84,2,1.5,1.14,0.01,"1 nonsynonymous","F167I",1
"lib2","SARS-CoV-2","TTGCGGAGCGATTGTT",2,0,NA,NA,NA,NA,NA,NA,"stop","N1* Q163H",2
"lib2","SARS-CoV-2","TTGCGGCAGAATAACA",12,163.04,9.43,-1.41,0.08,1.95,1.06,0,">1 nonsynonymous","C49V C61I",2
"lib2","SARS-CoV-2","TTGCGGCCCTTCAAAA",5,91,10.61,-0.22,0.03,2.96,1.06,0,"1 nonsynonymous","N40M",1
"lib2","SARS-CoV-2","TTGCGGGACCAAGACA",3,0.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G P82K N120D",3
"lib2","SARS-CoV-2","TTGCGGGATGTGAATT",16,72.51,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","R73G V103G K128S N151M Q163P",5
"lib2","SARS-CoV-2","TTGCGGGGAGTCACGC",6,154.89,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","R27A F167T T201S",3
"lib2","SARS-CoV-2","TTGCGTAAAATACATT",6,37,8.31,-2.53,0.13,2.34,1.07,0.01,"1 nonsynonymous","G146L",1
"lib2","SARS-CoV-2","TTGCGTAAGCCCTTAC",5,114.74,10.23,-0.6,0.04,2.91,1.08,0,">1 nonsynonymous","T55N K87G",2
"lib2","SARS-CoV-2","TTGCGTAAGCGAACTC",3,6.92,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F47S I88K Y93W",3
"lib2","SARS-CoV-2","TTGCGTAAGGCTGCCC",1,9.67,6,-4.84,2,1.5,1.28,0.05,">1 nonsynonymous","Q84C W106N Y123E S129L",4
"lib2","SARS-CoV-2","TTGCGTCACATCATGT",2,21.05,6,-4.84,2,3,1.08,0,">1 nonsynonymous","G51A Y165T K198S",3
"lib2","SARS-CoV-2","TTGCGTCCAACTCTGC",6,0.33,NA,NA,NA,NA,NA,NA,"stop","T3Y V71* N151V T201N",4
"lib2","SARS-CoV-2","TTGCGTGACAATAAAA",2,10.92,6,-4.84,2,3,1.17,0,">1 nonsynonymous","C49K V103M F126L",3
"lib2","SARS-CoV-2","TTGCGTTTCTAACCCT",2,2.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N30Y G83S R136L Q144T",4
"lib2","SARS-CoV-2","TTGCTAAACAAATTCT",2,5.39,7.24,-3.6,0.39,1.82,1.18,0.03,">1 nonsynonymous","D34C G101M Y165A",3
"lib2","SARS-CoV-2","TTGCTAAAGAGCCAAC",3,15.55,9.24,-1.6,0.07,1.88,1.03,0,">1 nonsynonymous","N13S K26R F134Q S164F",4
"lib2","SARS-CoV-2","TTGCTAAGGATATCAT",12,125.93,10.56,-0.27,0.02,2.93,1.05,0,">1 nonsynonymous","A42F T63V P149T",3
"lib2","SARS-CoV-2","TTGCTAAGGCGCTTAC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A14P F62V F156L T201L",4
"lib2","SARS-CoV-2","TTGCTAAGTTCATCGC",13,226.89,10.83,0,0.05,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTAATAATCAGTA",4,77.99,10.79,-0.05,0.05,2.88,1.06,0,"1 nonsynonymous","T3G",1
"lib2","SARS-CoV-2","TTGCTAATTCCGACGT",3,15.75,6.13,-4.71,0.45,2.39,1.09,0.01,">1 nonsynonymous","K48E C150G",2
"lib2","SARS-CoV-2","TTGCTAATTCCGATCA",3,76.63,8.42,-2.42,0.12,2.21,1.07,0.01,">1 nonsynonymous","D34Y G117A L188N",3
"lib2","SARS-CoV-2","TTGCTAATTGATCAAC",5,105.62,10.58,-0.25,0.07,2.87,1.14,0,">1 nonsynonymous","G51N F62S",2
"lib2","SARS-CoV-2","TTGCTACAAGTGATCC",7,85.81,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F12Q L60P R124S C158I",4
"lib2","SARS-CoV-2","TTGCTACCTAAAGAGT",3,37.02,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","N13C S19R R27K I138Q C195F",5
"lib2","SARS-CoV-2","TTGCTACCTAGATACA",2,29.52,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","Q84F R179I",2
"lib2","SARS-CoV-2","TTGCTACGAATACTGA",11,118.7,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C6S V77M S113G Y119K",4
"lib2","SARS-CoV-2","TTGCTACTGTCAACAT",3,0.68,NA,NA,NA,NA,NA,NA,"stop","L5T G83K Y91G N151*",4
"lib2","SARS-CoV-2","TTGCTAGACAGTAATG",4,206.19,10.43,-0.4,0.03,2.96,1.05,0,"1 nonsynonymous","F156A",1
"lib2","SARS-CoV-2","TTGCTAGACTTATAAT",5,67.48,6,-4.84,1.71,1.5,1.16,0.01,"1 nonsynonymous","P161R",1
"lib2","SARS-CoV-2","TTGCTAGATGGTTTAC",7,85.93,9.73,-1.11,0.1,1.82,1.09,0,">1 nonsynonymous","Y91G L122G",2
"lib2","SARS-CoV-2","TTGCTAGCGGTTAAAT",5,103.18,8.3,-2.53,0.09,2.17,1.06,0,">1 nonsynonymous","Q84E S113W",2
"lib2","SARS-CoV-2","TTGCTAGCTAGGGGTC",1,10.71,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S36I I88K",2
"lib2","SARS-CoV-2","TTGCTAGGGTACTAAT",14,46.44,7.73,-3.11,0.33,1.5,1,0.04,">1 nonsynonymous","K56G P82H",2
"lib2","SARS-CoV-2","TTGCTAGTATGAAGTC",4,60.58,9.35,-1.49,0.06,2.87,1.07,0,">1 nonsynonymous","K56H V77L K87R N130Q G152P",5
"lib2","SARS-CoV-2","TTGCTATAACAATAGT",1,23.37,8.1,-2.74,0.33,1.5,1.01,0.03,">1 nonsynonymous","S45V G86H Q176W K198R",4
"lib2","SARS-CoV-2","TTGCTATACAAAACAC",4,38.14,10.09,-0.74,0.12,2.16,1.01,0.01,">1 nonsynonymous","L5N V181T",2
"lib2","SARS-CoV-2","TTGCTATAGTAACTTC",5,14.77,6,-4.84,2,3,1.06,0,">1 nonsynonymous","F62C D68R Q84S",3
"lib2","SARS-CoV-2","TTGCTATGACCCCGTG",3,9.17,10.13,-0.71,0.21,2.8,1.07,0.02,">1 nonsynonymous","I28V F134S",2
"lib2","SARS-CoV-2","TTGCTATGACCGATGA",3,27.04,10.61,-0.23,0.11,2.62,1.33,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTATGTACGATAG",7,60.96,10.69,-0.15,0.04,2.94,1.05,0,">1 nonsynonymous","T55P P149N",2
"lib2","SARS-CoV-2","TTGCTATTAATGAACT",15,8.26,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","V103R Q168E F185R",3
"lib2","SARS-CoV-2","TTGCTATTAGCATAGT",4,15.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27I T100Q S113Q T201R",4
"lib2","SARS-CoV-2","TTGCTATTGCCAAATT",7,183.82,10.57,-0.27,0.03,2.94,1.06,0,"1 nonsynonymous","G155M",1
"lib2","SARS-CoV-2","TTGCTCAAAAACAACA",3,44.51,10.16,-0.67,0.08,2.66,1,0,"1 nonsynonymous","F99L",1
"lib2","SARS-CoV-2","TTGCTCAAATTTCCCG",3,74.52,10.9,0.07,0.05,2.97,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTCAATACAGAGA",4,105.37,10.78,-0.06,0.05,2.85,1.08,0,">1 nonsynonymous","G51R V115Q",2
"lib2","SARS-CoV-2","TTGCTCAATTCTGTGT",4,0.47,NA,NA,NA,NA,NA,NA,"stop","E10V D90S G116*",3
"lib2","SARS-CoV-2","TTGCTCAGACTACATA",1,21.79,10.04,-0.79,0.13,2.34,1.09,0.01,"1 nonsynonymous","G51L",1
"lib2","SARS-CoV-2","TTGCTCCCGAGCAATT",6,154.79,10.44,-0.4,0.03,2.93,1.05,0,">1 nonsynonymous","G83D K198T",2
"lib2","SARS-CoV-2","TTGCTCCTAAAATTTA",2,13.66,10.28,-0.56,0.08,2.94,1.05,0,">1 nonsynonymous","L5M N171C",2
"lib2","SARS-CoV-2","TTGCTCGAAAACACAT",1,3.48,NA,NA,NA,NA,NA,NA,"stop","F8L E10*",2
"lib2","SARS-CoV-2","TTGCTCGCAAGATCCT",13,40.33,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","C61L V103L D112Y",3
"lib2","SARS-CoV-2","TTGCTCGTCCTATGAA",2,14.66,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","Y50R G101D",2
"lib2","SARS-CoV-2","TTGCTCTAATTAGTCA",4,34.58,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","G51E A105W Q163N",3
"lib2","SARS-CoV-2","TTGCTCTCCAGGAACG",2,24.82,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K56R S69E N120T C195D",4
"lib2","SARS-CoV-2","TTGCTCTTCAATAACA",6,2.64,NA,NA,NA,NA,NA,NA,"stop","G116* P177L",2
"lib2","SARS-CoV-2","TTGCTGAAAAAATAAC",4,0.85,NA,NA,NA,NA,NA,NA,"stop","A14N A33* N110R",3
"lib2","SARS-CoV-2","TTGCTGACAAATCGGT",4,0.2,NA,NA,NA,NA,NA,NA,"stop","G9* L57R N64K D90C E141M F156E",6
"lib2","SARS-CoV-2","TTGCTGAGTAACAACT",1,13.25,10.91,0.07,0.06,2.95,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTGCACATACTCA",2,5.13,10.01,-0.82,0.09,2.13,1,0,"1 nonsynonymous","A89Y",1
"lib2","SARS-CoV-2","TTGCTGCTAGTTTAAA",1,1.32,NA,NA,NA,NA,NA,NA,"stop","A33T R127L F156A F167R T201*",5
"lib2","SARS-CoV-2","TTGCTGGAGTGAACCG",3,37.55,6.14,-4.69,0.81,1.5,1.11,0.01,">1 nonsynonymous","L95R Y119D",2
"lib2","SARS-CoV-2","TTGCTGGGGTACCGAA",11,167.27,10.84,0.01,0.04,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTGTACACCAACG",1,23.72,8.15,-2.69,0.16,1.87,1.07,0.01,">1 nonsynonymous","A14K W106F Y143T",3
"lib2","SARS-CoV-2","TTGCTGTTAAAACGTA",5,18.25,6,-4.84,2,3,1.13,0.01,">1 nonsynonymous","L57S I80W L162N",3
"lib2","SARS-CoV-2","TTGCTTACAAAACGAC",4,0.7,NA,NA,NA,NA,NA,NA,"stop","Y35K N40S Y91P D112*",4
"lib2","SARS-CoV-2","TTGCTTACAATAATTG",5,86.33,10.83,-0.01,0.05,2.97,1.04,0,">1 nonsynonymous","G9A S129N",2
"lib2","SARS-CoV-2","TTGCTTACCAGATACA",10,4.08,NA,NA,NA,NA,NA,NA,"stop","Y50I S69* L122K F156L",4
"lib2","SARS-CoV-2","TTGCTTAGAAATCGTG",3,8.31,7.98,-2.85,0.32,1.98,1.09,0.03,">1 nonsynonymous","Y121V G152S F160V",3
"lib2","SARS-CoV-2","TTGCTTATAGGAACGC",2,11.44,6.72,-4.12,0.5,1.5,1.24,0.03,">1 nonsynonymous","Y35L C61N D98F C102W",4
"lib2","SARS-CoV-2","TTGCTTATTATACCTT",4,0.34,NA,NA,NA,NA,NA,NA,"stop","G9L S19K D112S Y119D A192T K198*",6
"lib2","SARS-CoV-2","TTGCTTCCCCAAGCAT",12,130.67,9.33,-1.51,0.06,1.91,1.09,0,">1 nonsynonymous","N13L T63P",2
"lib2","SARS-CoV-2","TTGCTTGAGCACCATC",1,62.99,10.76,-0.08,0.07,2.92,1.11,0,"1 nonsynonymous","N1V",1
"lib2","SARS-CoV-2","TTGCTTGAGTAAAGAA",2,27.06,6.69,-4.15,0.58,1.5,1.13,0.06,">1 nonsynonymous","N120I F167L",2
"lib2","SARS-CoV-2","TTGCTTGATGAGGCTA",4,44.73,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","S19L T85L D97L",3
"lib2","SARS-CoV-2","TTGCTTGGCACGGCTG",1,0,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTTTAGACCAAGA",2,90.18,10.68,-0.16,0.02,2.96,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGCTTTGCTATACAG",5,29.72,10.53,-0.31,0.07,2.89,1.05,0,"1 nonsynonymous","E141W",1
"lib2","SARS-CoV-2","TTGCTTTTGCGAGTAA",1,2.53,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60H",1
"lib2","SARS-CoV-2","TTGCTTTTTAAGGTAA",2,69.86,8.67,-2.17,0.1,2.69,1.03,0,">1 nonsynonymous","N107C N130M G166V",3
"lib2","SARS-CoV-2","TTGGAAAAAAATAGCC",1,18.98,8.06,-2.78,0.33,1.52,1.08,0.05,">1 nonsynonymous","F47G T55V T201Q",3
"lib2","SARS-CoV-2","TTGGAAAAATGTCTTC",2,29.92,8.23,-2.61,0.17,2.02,1.03,0.01,">1 nonsynonymous","Y50M Y119H",2
"lib2","SARS-CoV-2","TTGGAAAACCCCGTAA",16,29.87,9.71,-1.13,0.16,1.77,1.08,0.01,">1 nonsynonymous","A42L A89M",2
"lib2","SARS-CoV-2","TTGGAAAAGAAGCTAG",1,0.42,NA,NA,NA,NA,NA,NA,"stop","F8E S36C D137Q P149* L183I",5
"lib2","SARS-CoV-2","TTGGAAAATCAATCCC",1,4.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R27A I80T Y93I F167W",4
"lib2","SARS-CoV-2","TTGGAAAATCTCCTCC",1,4.82,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36R",1
"lib2","SARS-CoV-2","TTGGAAACCGTGTAAT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","P7A F12Q T85S D90*",4
"lib2","SARS-CoV-2","TTGGAAACTTCATTTT",12,4.39,NA,NA,NA,NA,NA,NA,"stop","T15* G83L C102W Q168S",4
"lib2","SARS-CoV-2","TTGGAAAGAGCCTACT",5,0.02,NA,NA,NA,NA,NA,NA,"stop","S19P F44* L60C D90W V180I",5
"lib2","SARS-CoV-2","TTGGAAAGGGTGCGTG",17,172.35,10.02,-0.81,0.05,2.68,1.03,0,">1 nonsynonymous","F12W S129T",2
"lib2","SARS-CoV-2","TTGGAAATATGAACCG",4,60.68,9.38,-1.45,0.08,2.83,1.11,0,"1 nonsynonymous","I142R",1
"lib2","SARS-CoV-2","TTGGAAATGGTCGCAA",6,36.3,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","D68L A89T T201A",3
"lib2","SARS-CoV-2","TTGGAAATGTTCGATC",3,33.42,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","G74P K128R Y178I",3
"lib2","SARS-CoV-2","TTGGAACAAAAAATTA",2,19.3,6.9,-3.94,0.18,1.5,1.03,0.01,"1 nonsynonymous","C158V",1
"lib2","SARS-CoV-2","TTGGAACAAATTTAAG",9,78.57,6,-4.84,2,1.5,1.27,0.02,">1 nonsynonymous","E10L Y66P D90N",3
"lib2","SARS-CoV-2","TTGGAACATACATCCG",3,31.01,10.35,-0.49,0.15,2.24,1,0.01,">1 nonsynonymous","P7V C61T",2
"lib2","SARS-CoV-2","TTGGAACATATAAGAC",3,27.52,10.76,-0.07,0.06,2.89,1.1,0,">1 nonsynonymous","N1S P7A A33L V173L",4
"lib2","SARS-CoV-2","TTGGAACCCCACGTTA",4,51.62,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","L5M S19V Y143D A190S",4
"lib2","SARS-CoV-2","TTGGAACCTATGAGGT",2,77.65,7.33,-3.5,0.11,2.24,1.13,0,"1 nonsynonymous","C158T",1
"lib2","SARS-CoV-2","TTGGAACGAAATCTAG",3,99.13,10.39,-0.45,0.03,2.92,1.05,0,"1 nonsynonymous","R136I",1
"lib2","SARS-CoV-2","TTGGAACGATCATGCC",7,224.87,10.86,0.02,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGAACGCAAAATAT",4,18.38,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","V32L G101Q Y178V",3
"lib2","SARS-CoV-2","TTGGAACGTTAACATG",8,201.67,10.83,-0.01,0.04,2.97,1.04,0,">1 nonsynonymous","D97T V153Q",2
"lib2","SARS-CoV-2","TTGGAACTAACGCAAA",1,23.05,10.71,-0.12,0.07,2.94,1.08,0,"1 nonsynonymous","K87F",1
"lib2","SARS-CoV-2","TTGGAACTAATAGGGT",13,165.05,9.94,-0.89,0.03,2.96,1.02,0,"1 nonsynonymous","F44N",1
"lib2","SARS-CoV-2","TTGGAACTGCTAATCT",3,40.3,9.95,-0.89,0.08,2.14,1,0,">1 nonsynonymous","S41W T46N P133F",3
"lib2","SARS-CoV-2","TTGGAACTTACATATT",4,87.06,10.82,-0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGAAGAAATAATGT",8,1.57,NA,NA,NA,NA,NA,NA,"stop","D90R P133* C150Y G155C",4
"lib2","SARS-CoV-2","TTGGAAGAGAACTAGA",9,135.64,10.15,-0.68,0.06,2.64,1.05,0,"1 nonsynonymous","Y91R",1
"lib2","SARS-CoV-2","TTGGAAGAGTGGATGC",14,93.33,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F44P D59E R124H E135I",4
"lib2","SARS-CoV-2","TTGGAAGCCCGACAAA",3,55.15,6,-4.84,2,3,1.19,0.01,">1 nonsynonymous","K48E K128F C158W",3
"lib2","SARS-CoV-2","TTGGAAGCGACACCTA",1,4,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K94N G101L",2
"lib2","SARS-CoV-2","TTGGAAGGATTTGTAA",3,93.89,10.01,-0.82,0.09,2.61,1.06,0,">1 nonsynonymous","G83C A89T T148G",3
"lib2","SARS-CoV-2","TTGGAAGGTGACGGCA",2,68.93,8.07,-2.77,0.23,1.59,1.06,0.02,"1 nonsynonymous","Q176Y",1
"lib2","SARS-CoV-2","TTGGAATACTTAGCCC",7,3.5,NA,NA,NA,NA,NA,NA,"stop","Y66*",1
"lib2","SARS-CoV-2","TTGGAATATATACACT",3,46.33,9.01,-1.83,0.1,2.19,1.1,0.01,">1 nonsynonymous","K87M L95M C102M",3
"lib2","SARS-CoV-2","TTGGAATGCAAATGAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G51D N92Q N120R",3
"lib2","SARS-CoV-2","TTGGAATTACTTACGT",6,73.43,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","F17E E76K E135L V173N",4
"lib2","SARS-CoV-2","TTGGAATTTAAAAATC",2,12.76,8.69,-2.14,0.19,1.5,1.06,0.01,">1 nonsynonymous","F44R I88V G155M",3
"lib2","SARS-CoV-2","TTGGAATTTATGGACC",4,103.1,9.22,-1.61,0.02,2.91,1.11,0,"1 nonsynonymous","G117R",1
"lib2","SARS-CoV-2","TTGGACAAACGGAACT",3,15.84,7.01,-3.82,0.46,1.5,1.09,0.06,">1 nonsynonymous","A14I N30F L60H P82W A145T N171S V182S",7
"lib2","SARS-CoV-2","TTGGACACTATTGCGA",12,77.46,6,-4.84,1.83,1.5,1.21,0.01,">1 nonsynonymous","A18E F44L K87L F99G V103S Y143P",6
"lib2","SARS-CoV-2","TTGGACAGAGAAAGAC",4,2.49,NA,NA,NA,NA,NA,NA,"stop","L38C Q84H C102R T170*",4
"lib2","SARS-CoV-2","TTGGACAGCGAAAAAC",4,42.16,9.95,-0.88,0.1,2.37,1.05,0.01,">1 nonsynonymous","Y91R N120S",2
"lib2","SARS-CoV-2","TTGGACAGGCACTTAG",1,19.78,6,-4.84,1.01,1.5,1.11,0.01,">1 nonsynonymous","C102L L162K L188W",3
"lib2","SARS-CoV-2","TTGGACAGTTAAAAAT",7,353.63,9.32,-1.52,0.05,2.69,1.07,0,"1 nonsynonymous","Q176L",1
"lib2","SARS-CoV-2","TTGGACATATAAAGTG",2,42.76,8.43,-2.41,0.11,2.45,1.02,0.01,">1 nonsynonymous","T63W G117V",2
"lib2","SARS-CoV-2","TTGGACCAAACATTCT",5,0.31,NA,NA,NA,NA,NA,NA,"stop","F8L W106E K114Q Y121* Y143F L187*",6
"lib2","SARS-CoV-2","TTGGACCACAATAGCA",1,437.82,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","S45W A105T S113P F156L",4
"lib2","SARS-CoV-2","TTGGACCCTTTAGCTA",3,32.64,9.38,-1.45,0.09,1.95,1.12,0,">1 nonsynonymous","Y35M V77S",2
"lib2","SARS-CoV-2","TTGGACCGCACGAATA",2,0.47,NA,NA,NA,NA,NA,NA,"stop","F17S T85S E141*",3
"lib2","SARS-CoV-2","TTGGACCGTGAAGTCC",1,0.93,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTGGACCTAGAGCCAA",1,31.7,10.23,-0.61,0.09,2.82,1.04,0,">1 nonsynonymous","L5M T46S D98L",3
"lib2","SARS-CoV-2","TTGGACCTATGAGCCA",3,18.64,10.96,0.12,0.09,3,1.06,0,"1 nonsynonymous","T3A",1
"lib2","SARS-CoV-2","TTGGACCTTAGAGTTC",2,12.45,6,-4.84,2,3,1.04,0,">1 nonsynonymous","S41P S113F G155H",3
"lib2","SARS-CoV-2","TTGGACGAGCAAGTTC",8,80.45,10.52,-0.32,0.04,2.92,1.05,0,"1 nonsynonymous","S29L",1
"lib2","SARS-CoV-2","TTGGACGGAACTCTCT",5,21.82,6,-4.84,2,1.5,1.09,0.03,">1 nonsynonymous","R25D G83W D90S",3
"lib2","SARS-CoV-2","TTGGACGTACGAGGAA",6,0.41,NA,NA,NA,NA,NA,NA,"stop","F99C Y119*",2
"lib2","SARS-CoV-2","TTGGACTAGATACCAT",1,7.39,10.8,-0.04,0.34,2.85,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGACTGTATAGTAA",2,22,6,-4.84,2,1.5,1.14,0.04,">1 nonsynonymous","V20G G83I",2
"lib2","SARS-CoV-2","TTGGACTTGATACTTT",1,16.83,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","F8V S41T G83L D90S T100S E135M F160E Q176A",8
"lib2","SARS-CoV-2","TTGGACTTGCGTCCCG",3,0.12,NA,NA,NA,NA,NA,NA,"stop","E10I I88* V103E G152T",4
"lib2","SARS-CoV-2","TTGGACTTGTCACGTT",14,146.1,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V32M C61R D137T P149T",4
"lib2","SARS-CoV-2","TTGGAGAAAGAAAAGG",1,20.19,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","G101W N120K",2
"lib2","SARS-CoV-2","TTGGAGAATAGGTTTT",4,99.23,10.73,-0.1,0.03,2.91,1.1,0,">1 nonsynonymous","I2P L122W",2
"lib2","SARS-CoV-2","TTGGAGACTAGTAAAC",2,8.74,10.48,-0.36,0.11,2.96,1,0.01,">1 nonsynonymous","T3K A14C",2
"lib2","SARS-CoV-2","TTGGAGCACAATTATC",2,1.53,NA,NA,NA,NA,NA,NA,"stop","L5T A42C S108G L122*",4
"lib2","SARS-CoV-2","TTGGAGGGTACCTCGT",4,84.4,10.83,-0.01,0.05,2.98,1.05,0,"1 nonsynonymous","V37L",1
"lib2","SARS-CoV-2","TTGGAGTATACACAGA",2,39.04,6.99,-3.85,0.23,1.76,1.11,0.01,">1 nonsynonymous","E135N G172S",2
"lib2","SARS-CoV-2","TTGGAGTCAATGGACG",9,231.67,9.83,-1.01,0.04,2.92,1.09,0,">1 nonsynonymous","T3A N24H L125T",3
"lib2","SARS-CoV-2","TTGGAGTCTTAAACCG",2,13.93,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","N4K L5V R25C T46I P149R Y178S",6
"lib2","SARS-CoV-2","TTGGAGTCTTCCCCAG",5,114.13,10.83,0,0.03,2.94,1.06,0,"1 nonsynonymous","F160S",1
"lib2","SARS-CoV-2","TTGGAGTGCTATCGCT",8,21.74,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","S41V T100P Y143E",3
"lib2","SARS-CoV-2","TTGGAGTGTATCTAGC",6,42.18,6,-4.84,2,3,1.11,0,">1 nonsynonymous","A33P C61Y G83V G101V",4
"lib2","SARS-CoV-2","TTGGAGTTCTGAAACA",3,42.63,10.74,-0.09,0.06,2.88,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGAGTTGAACACTG",2,2.79,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L N30I R127S P177T",4
"lib2","SARS-CoV-2","TTGGATAAAAACGCAC",3,80.85,9.96,-0.88,0.05,2.91,1.05,0,">1 nonsynonymous","R16L N64F F156M",3
"lib2","SARS-CoV-2","TTGGATAAAAACGTTC",7,75.01,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V20M N58S Y175G",3
"lib2","SARS-CoV-2","TTGGATAAAGAATAGA",5,16.73,10.03,-0.81,0.11,2.82,1.11,0.01,">1 nonsynonymous","S45V Q144R P197R",3
"lib2","SARS-CoV-2","TTGGATAATGATAATA",6,123.88,10.45,-0.39,0.04,2.92,1.05,0,">1 nonsynonymous","Y91N Q163S",2
"lib2","SARS-CoV-2","TTGGATAATGCAAATA",1,1.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15M S36M T55N D68S K87N T201V",6
"lib2","SARS-CoV-2","TTGGATAATTGCACTA",4,21.67,10.71,-0.13,0.05,2.96,1.03,0,">1 nonsynonymous","S41C L60R N171Y",3
"lib2","SARS-CoV-2","TTGGATACACGAATTC",7,61.85,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A81G L95S Y119P",3
"lib2","SARS-CoV-2","TTGGATACCCCTGTTT",14,216.24,10.87,0.03,0.05,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGATATATATGACC",10,75.36,9.63,-1.21,0.08,1.93,1.08,0,">1 nonsynonymous","L5S I72L I104G L122Y",4
"lib2","SARS-CoV-2","TTGGATATCATAGTAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","F47* D90G W106S",3
"lib2","SARS-CoV-2","TTGGATATGTTAACTC",10,49.8,10.33,-0.51,0.05,2.92,1.04,0,">1 nonsynonymous","N120Y V153L N171C",3
"lib2","SARS-CoV-2","TTGGATATTCATATGC",7,71.26,9.22,-1.61,0.12,1.99,1.06,0.01,">1 nonsynonymous","L38P N120S",2
"lib2","SARS-CoV-2","TTGGATCAATAGCAAC",14,56.93,6,-4.84,2,3,1.26,0.01,">1 nonsynonymous","I2A S43I I80R I138C G174R",5
"lib2","SARS-CoV-2","TTGGATCCAATGTCAA",7,21.5,7.96,-2.88,0.39,1.5,1.05,0.06,">1 nonsynonymous","V32I L60V V103G R136D N157Q",5
"lib2","SARS-CoV-2","TTGGATTATAAAACGC",8,1.45,NA,NA,NA,NA,NA,NA,"stop","N64* D90A N120V Q176P",4
"lib2","SARS-CoV-2","TTGGATTATGATTCAA",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15K S36E A81P T85F D98F I104E Y175G",7
"lib2","SARS-CoV-2","TTGGATTGGTTTCACA",4,139,9.53,-1.31,0.04,2.79,1.11,0,"1 nonsynonymous","G146F",1
"lib2","SARS-CoV-2","TTGGATTTAGTTATGA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3D S36M L60R F126* G174*",5
"lib2","SARS-CoV-2","TTGGCAAAAATCACCT",1,37.48,9.39,-1.44,0.19,1.52,1.12,0.01,">1 nonsynonymous","P7R A81N F99W N110S",4
"lib2","SARS-CoV-2","TTGGCAAACCCCCCAA",7,125.49,10.42,-0.42,0.05,2.84,1.04,0,">1 nonsynonymous","K94A K128S K198T",3
"lib2","SARS-CoV-2","TTGGCAAGATTAAATT",15,6.17,NA,NA,NA,NA,NA,NA,"stop","P7C F17M K56* Y119S G155N",5
"lib2","SARS-CoV-2","TTGGCAAGTATAAAGT",9,42.39,NA,NA,NA,NA,NA,0.09,"1 nonsynonymous","R179G",1
"lib2","SARS-CoV-2","TTGGCACAGAATCTGA",2,59.29,7.56,-3.27,0.15,1.68,1.13,0.01,"1 nonsynonymous","N157I",1
"lib2","SARS-CoV-2","TTGGCACCAATGGTCA",10,190.32,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L38F G83E D98R L122S Y159L G174H",6
"lib2","SARS-CoV-2","TTGGCACTTATTCGAT",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90H F134T T140K",3
"lib2","SARS-CoV-2","TTGGCAGAAAAGGCCT",1,88.33,10.52,-0.31,0.04,2.82,1.15,0,">1 nonsynonymous","K132A E141L",2
"lib2","SARS-CoV-2","TTGGCATAGTATGGAC",1,12.95,10.75,-0.08,0.09,2.74,1.28,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGGCATCAATCTCTA",1,35.79,10.86,0.03,0.06,2.94,1.09,0,"1 nonsynonymous","P149L",1
"lib2","SARS-CoV-2","TTGGCATCCATTAAAC",7,42.03,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","N13F D137V",2
"lib2","SARS-CoV-2","TTGGCATTTTTGCCTA",5,103.42,7.76,-3.07,0.14,1.5,1.1,0.01,">1 nonsynonymous","F8Q F62L G155R G174A",4
"lib2","SARS-CoV-2","TTGGCCAAACAACGAC",4,49.95,10.94,0.11,0.08,2.96,1.05,0,">1 nonsynonymous","L5R T201C",2
"lib2","SARS-CoV-2","TTGGCCACAATAATTT",1,14.03,9.5,-1.33,0.29,1.5,1,0.05,">1 nonsynonymous","S43G Y50K S200L",3
"lib2","SARS-CoV-2","TTGGCCACAGGGCGTT",5,40.86,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","P7T A14W C150I Y159M T201S",5
"lib2","SARS-CoV-2","TTGGCCAGATATCTTG",11,97.43,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","E10I N107G Q168K",3
"lib2","SARS-CoV-2","TTGGCCCATAATGCTA",11,106.07,10.74,-0.1,0.03,2.96,1.02,0,"1 nonsynonymous","N30K",1
"lib2","SARS-CoV-2","TTGGCCCCACAACCGA",8,96.92,6,-4.84,2,3,1.11,0,">1 nonsynonymous","L5W S19R N92K Q144A S200C",5
"lib2","SARS-CoV-2","TTGGCCCTAACACACA",2,33.49,7.82,-3.01,0.26,1.5,1,0.03,">1 nonsynonymous","F44S P54G N58H Y178I",4
"lib2","SARS-CoV-2","TTGGCCGGAGATAGGT",5,86.49,8.7,-2.14,0.05,2,1.1,0,">1 nonsynonymous","T15E V37G P161Q",3
"lib2","SARS-CoV-2","TTGGCCTAAAAGGAAG",13,81.2,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","K87C D98H A105D G152T",4
"lib2","SARS-CoV-2","TTGGCCTAAGGTAAAA",6,53.06,10.11,-0.73,0.07,2.6,1.08,0,">1 nonsynonymous","N110W I138Y",2
"lib2","SARS-CoV-2","TTGGCGAGATGCGGAG",1,5.62,NA,NA,NA,NA,NA,NA,"stop","F12S A18M I80* Q84P Q144E F185S",6
"lib2","SARS-CoV-2","TTGGCGATTCTCAATC",2,47.86,10.71,-0.13,0.04,2.85,1.16,0,"1 nonsynonymous","L60N",1
"lib2","SARS-CoV-2","TTGGCGCACGTTGAAA",4,96.82,9.1,-1.73,0.08,1.86,1.11,0,">1 nonsynonymous","F12N C31G F44Y",3
"lib2","SARS-CoV-2","TTGGCGCAGTTCAAAA",10,123.23,10.31,-0.52,0.04,2.88,1.06,0,">1 nonsynonymous","L5P R78V E186I",3
"lib2","SARS-CoV-2","TTGGCGCGACTGAGCC",11,188.24,10.9,0.06,0.06,2.93,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGCGGACCCTAGAA",6,82.68,10.86,0.02,0.06,2.97,1.05,0,"1 nonsynonymous","N64T",1
"lib2","SARS-CoV-2","TTGGCGGAGATTAAAT",8,111.43,10.79,-0.05,0.03,2.97,1.04,0,"1 nonsynonymous","A105S",1
"lib2","SARS-CoV-2","TTGGCGGCAATTAATT",6,195.89,9.88,-0.95,0.03,2.88,1.03,0,">1 nonsynonymous","G9M Y143H F160T",3
"lib2","SARS-CoV-2","TTGGCGGTAATGATTA",5,11.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G51V T140F L183Y S200K",4
"lib2","SARS-CoV-2","TTGGCGTAAAGAATCA",1,24.59,10.66,-0.18,0.07,2.86,1.15,0,"1 nonsynonymous","K48L",1
"lib2","SARS-CoV-2","TTGGCGTCACTCTAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","D68*",1
"lib2","SARS-CoV-2","TTGGCGTCTTATTGGA",2,38.54,8.73,-2.11,0.1,2.84,1.03,0.01,">1 nonsynonymous","T15V Y119I",2
"lib2","SARS-CoV-2","TTGGCGTTGCGAATTT",1,13.47,10.61,-0.23,0.17,3,1.01,0.01,"1 nonsynonymous","G155S",1
"lib2","SARS-CoV-2","TTGGCTAAGAAACTTA",3,19.43,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","A33P N58T F62N V103F Y143T",5
"lib2","SARS-CoV-2","TTGGCTAAGGATAAAA",2,9.94,10.22,-0.62,0.09,2.85,1,0,">1 nonsynonymous","S41P L57M G83N",3
"lib2","SARS-CoV-2","TTGGCTACATTCAATA",7,74,10.07,-0.77,0.08,2.09,1.07,0,">1 nonsynonymous","D59A K128S E135R",3
"lib2","SARS-CoV-2","TTGGCTACCTAGAATA",9,177.47,9.88,-0.96,0.06,2.16,1.04,0,"1 nonsynonymous","L38S",1
"lib2","SARS-CoV-2","TTGGCTAGAGCGATTG",9,187.82,10.17,-0.67,0.03,2.89,1.01,0,">1 nonsynonymous","N64M I104V N120V",3
"lib2","SARS-CoV-2","TTGGCTATATTCTACC",5,57.12,6.51,-4.32,0.51,1.5,1.1,0.02,">1 nonsynonymous","Y50K T100S L122A",3
"lib2","SARS-CoV-2","TTGGCTGCAATGAAAT",11,162.32,10.54,-0.3,0.05,2.94,1.04,0,"1 nonsynonymous","D90C",1
"lib2","SARS-CoV-2","TTGGCTGGAGACTACT",2,14.41,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","D68A P149T",2
"lib2","SARS-CoV-2","TTGGCTGGTCAAAAGT",2,0.67,NA,NA,NA,NA,NA,NA,"stop","S53K F99* Q163S",3
"lib2","SARS-CoV-2","TTGGGAAAAACGATAA",2,65.19,10.64,-0.19,0.04,3,1.02,0,">1 nonsynonymous","Y66F Y91M L122R E154T",4
"lib2","SARS-CoV-2","TTGGGAACCGTGCAAA",10,83.85,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","I28N C49V E135S",3
"lib2","SARS-CoV-2","TTGGGAACCTCTAGTA",1,45.67,6,-4.84,2,3,1.25,0.02,">1 nonsynonymous","L60T Y119E L131G",3
"lib2","SARS-CoV-2","TTGGGAATAATGCTAT",3,0.23,NA,NA,NA,NA,NA,NA,"stop","A22* K94A V103M P149Q",4
"lib2","SARS-CoV-2","TTGGGAATTTTTAATA",8,51.99,7.87,-2.97,0.21,1.54,1.16,0.01,">1 nonsynonymous","R179T K199T",2
"lib2","SARS-CoV-2","TTGGGACATACCATGT",2,36.39,8.6,-2.24,0.31,1.5,1,0.04,">1 nonsynonymous","A14G W106G",2
"lib2","SARS-CoV-2","TTGGGACTATGCACTA",3,14.74,10.01,-0.82,0.24,1.9,1,0.02,">1 nonsynonymous","L5Q A81N H189L",3
"lib2","SARS-CoV-2","TTGGGAGAACCGCAAG",2,6.93,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","T15K Y39Q K94Q A105R",4
"lib2","SARS-CoV-2","TTGGGATCAACAGATG",5,1.07,NA,NA,NA,NA,NA,NA,"stop","P7G W106* Q168S",3
"lib2","SARS-CoV-2","TTGGGATCTAATGTAA",6,117.52,9.05,-1.79,0.08,1.69,1.09,0,">1 nonsynonymous","F62M L95T A190C",3
"lib2","SARS-CoV-2","TTGGGCAATCTTAAAA",10,42.82,6,-4.84,2,3,1.3,0.01,">1 nonsynonymous","Y93T S108N C150F Q163S P197S",5
"lib2","SARS-CoV-2","TTGGGCAGAATTATTA",2,13.04,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A81E T140V Y178D",3
"lib2","SARS-CoV-2","TTGGGCAGCGGTCCAA",12,60.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34E K94N N107S",3
"lib2","SARS-CoV-2","TTGGGCATGATGGAAA",7,158.55,8.5,-2.33,0.12,1.5,1.09,0.01,">1 nonsynonymous","P54H G86M",2
"lib2","SARS-CoV-2","TTGGGCCCAGGAACTT",2,13.12,7.07,-3.77,0.4,1.5,1.03,0.04,">1 nonsynonymous","Y91D K132H P149M T201Y",4
"lib2","SARS-CoV-2","TTGGGCGATCCGCAAA",1,20.55,10.65,-0.18,0.04,3,1,0,">1 nonsynonymous","V32F S41L",2
"lib2","SARS-CoV-2","TTGGGCTATACGGGGA",4,80.87,9.09,-1.74,0.1,1.71,1.15,0,"1 nonsynonymous","P96I",1
"lib2","SARS-CoV-2","TTGGGCTGCAACGACA",4,60.38,8.16,-2.67,0.09,1.96,1.06,0,">1 nonsynonymous","P96H N118S",2
"lib2","SARS-CoV-2","TTGGGGAAGTCTATCG",2,37.42,9.88,-0.95,0.12,2.3,1.1,0.01,">1 nonsynonymous","N13V S29T",2
"lib2","SARS-CoV-2","TTGGGGATCATAAGAT",3,26.59,9.45,-1.39,0.06,2.95,1.05,0,">1 nonsynonymous","D90N Y119S",2
"lib2","SARS-CoV-2","TTGGGGATGGTAGTAA",4,60.34,7.98,-2.86,0.14,2.35,1.11,0.01,">1 nonsynonymous","A33T I142H S147F G166W",4
"lib2","SARS-CoV-2","TTGGGGCAAATATTCC",2,50.62,10.52,-0.32,0.04,2.93,1.08,0,"1 nonsynonymous","F44E",1
"lib2","SARS-CoV-2","TTGGGGCTGATGTGCG",10,132.17,10.35,-0.49,0.03,2.86,1.06,0,">1 nonsynonymous","F47L L60I",2
"lib2","SARS-CoV-2","TTGGGGTAGAGGGATT",4,30.74,6.03,-4.8,0.74,1.5,1.12,0.01,">1 nonsynonymous","I80M Y121K",2
"lib2","SARS-CoV-2","TTGGGGTATAATACAA",10,48.02,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5S F99N",2
"lib2","SARS-CoV-2","TTGGGGTCCACATCCC",1,2.63,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23K V52D G155C",3
"lib2","SARS-CoV-2","TTGGGGTCTCAAATAT",5,43.71,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y91A W106K L122V",3
"lib2","SARS-CoV-2","TTGGGGTCTGCACTGG",9,16.66,6,-4.84,2,1.5,1.24,0.07,">1 nonsynonymous","D34Y A105K G166C V173N",4
"lib2","SARS-CoV-2","TTGGGGTTAACGAGAG",4,67.92,10.9,0.06,0.04,2.92,1.09,0,">1 nonsynonymous","T55D L60Y",2
"lib2","SARS-CoV-2","TTGGGTAAATTGTATA",11,32.13,6,-4.84,2,3,1.11,0,">1 nonsynonymous","S43F V77G C158L",3
"lib2","SARS-CoV-2","TTGGGTACTCTAAACT",3,21.13,7.1,-3.74,0.25,1.5,1.11,0.02,">1 nonsynonymous","N130S C150F S200M",3
"lib2","SARS-CoV-2","TTGGGTATGATAAACC",8,90.95,10.67,-0.16,0.05,2.94,1.05,0,"1 nonsynonymous","F160I",1
"lib2","SARS-CoV-2","TTGGGTCACTTAGGGT",9,71.63,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","L38R A89T D98K N107M S129Y",5
"lib2","SARS-CoV-2","TTGGGTCAGGGACAAA",1,27.22,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","K48D G155C P177V",3
"lib2","SARS-CoV-2","TTGGGTCCCGGGAATT",11,0.85,NA,NA,NA,NA,NA,NA,"stop","A18N Q79* N118S P133A T201L",5
"lib2","SARS-CoV-2","TTGGGTCCTCCTACAC",2,34.66,6,-4.83,0.33,2.31,1.08,0,">1 nonsynonymous","F99C Y119C P197Q",3
"lib2","SARS-CoV-2","TTGGGTGATAATCGAA",3,35.56,6,-4.84,2,3,1.24,0.01,">1 nonsynonymous","P54H C158W Q176L",3
"lib2","SARS-CoV-2","TTGGGTGATCAAGACG",10,53.41,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","T46C F99P Q144M",3
"lib2","SARS-CoV-2","TTGGGTGCAATATAAT",2,23.68,7.06,-3.78,0.39,1.5,1.24,0.03,">1 nonsynonymous","F47H T63S S139M T201K",4
"lib2","SARS-CoV-2","TTGGGTGCCCAAAGCC",15,6.47,NA,NA,NA,NA,NA,NA,"stop","I28* A105I Y121Q",3
"lib2","SARS-CoV-2","TTGGGTGTTAACAAAA",4,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96I F156L Q168P",3
"lib2","SARS-CoV-2","TTGGGTTAAACTCAAC",9,102.69,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","A67N G101N V153S Y175N E186V",5
"lib2","SARS-CoV-2","TTGGGTTAATAACCAA",1,4.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D68K P197W",2
"lib2","SARS-CoV-2","TTGGTAAACCATGATA",5,118.29,10.52,-0.32,0.04,2.9,1.03,0,"1 nonsynonymous","A22L",1
"lib2","SARS-CoV-2","TTGGTAAAGGTACGAG",17,122.42,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","F99N N120T K199L",3
"lib2","SARS-CoV-2","TTGGTAACCAGGTTTG",6,25.67,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","F99Q",1
"lib2","SARS-CoV-2","TTGGTAACGGAATAAG",1,0.8,NA,NA,NA,NA,NA,NA,"stop","I28* Y35A S45C L95M",4
"lib2","SARS-CoV-2","TTGGTAACGGTACCGA",9,147.21,10.74,-0.1,0.05,2.92,1.11,0,"1 nonsynonymous","S29C",1
"lib2","SARS-CoV-2","TTGGTAAGACGCAGCA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60C K128Y",2
"lib2","SARS-CoV-2","TTGGTAAGCCATGCGT",1,12.39,10.55,-0.29,0.09,2.94,1.08,0.01,">1 nonsynonymous","T55K D97N V115F",3
"lib2","SARS-CoV-2","TTGGTAATACTTGGGA",1,49.07,10.69,-0.15,0.09,2.87,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGGTAATAGACCTGA",7,17.8,10.09,-0.74,0.14,2.23,1.06,0.01,">1 nonsynonymous","E10W T15D A42N A190D",4
"lib2","SARS-CoV-2","TTGGTACATATCCCAA",2,7.33,9.39,-1.44,0.16,1.96,1,0.01,">1 nonsynonymous","N107S L162M",2
"lib2","SARS-CoV-2","TTGGTACTACAACGAA",1,29.59,10.9,0.07,0.06,2.99,1.05,0,"1 nonsynonymous","T55M",1
"lib2","SARS-CoV-2","TTGGTACTAGGCAATC",6,0.87,NA,NA,NA,NA,NA,NA,"stop","C6W S41W D90* D98V",4
"lib2","SARS-CoV-2","TTGGTAGACTAAATGC",11,81.56,10.68,-0.16,0.05,2.86,1.13,0,"1 nonsynonymous","A42T",1
"lib2","SARS-CoV-2","TTGGTAGCCATGCTCA",1,67.18,10.62,-0.21,0.06,2.99,1.03,0,">1 nonsynonymous","I2T I138L G155A",3
"lib2","SARS-CoV-2","TTGGTAGCCGAAATTG",9,65.51,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","C49G C158H Y178D",3
"lib2","SARS-CoV-2","TTGGTAGCTTGTCTGT",9,21.28,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C6T A33S P149G V181W",4
"lib2","SARS-CoV-2","TTGGTAGTATTAACCC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2N Y91Q G101N",3
"lib2","SARS-CoV-2","TTGGTAGTGTTAGAAA",2,37.17,10.11,-0.73,0.06,3,1,0,"1 nonsynonymous","C6A",1
"lib2","SARS-CoV-2","TTGGTATAACCCAGAG",15,88.24,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","G86T G101A S113T Y123M G152H",5
"lib2","SARS-CoV-2","TTGGTATGCCAATCAT",3,0,NA,NA,NA,NA,NA,NA,"stop","T3* Y35R D90F R127N R136K",5
"lib2","SARS-CoV-2","TTGGTATGCTATACAC",1,5.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A42S T63L Q168P S200G",4
"lib2","SARS-CoV-2","TTGGTCACCCAATATT",3,46.19,9.87,-0.96,0.07,2.3,1.1,0,">1 nonsynonymous","K56P N120L",2
"lib2","SARS-CoV-2","TTGGTCACTCATAGTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15A V103R",2
"lib2","SARS-CoV-2","TTGGTCAGCATGACAC",3,55.33,10.51,-0.33,0.13,2.78,1.17,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTGGTCAGTTACCGCA",2,22.63,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","F8L K56P W106E",3
"lib2","SARS-CoV-2","TTGGTCATACAAGAGG",1,8.23,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","E10V G51W N64C K87S G117R",5
"lib2","SARS-CoV-2","TTGGTCATAGCCCCCT",12,236.95,10.44,-0.39,0.05,2.94,1.08,0,"1 nonsynonymous","K87A",1
"lib2","SARS-CoV-2","TTGGTCATTCGGTTAA",1,80.66,10.87,0.04,0.04,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGTCCAACAATATT",10,26.14,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","S53R I80Y P197Q",3
"lib2","SARS-CoV-2","TTGGTCCTAATCGTCC",3,38.1,10.15,-0.69,0.12,2.17,1.11,0.01,">1 nonsynonymous","S29K R127S V153R",3
"lib2","SARS-CoV-2","TTGGTCCTAGACCCCT",8,90.08,10.09,-0.74,0.04,2.97,1,0,"1 nonsynonymous","Y143L",1
"lib2","SARS-CoV-2","TTGGTCGAAAAACAAC",9,235.22,10.86,0.03,0.04,2.91,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGTCTCAATTGATC",7,67.9,8.97,-1.87,0.11,1.64,1.09,0,">1 nonsynonymous","V52M I104Y Y123M Q144R",4
"lib2","SARS-CoV-2","TTGGTGAACTTCGGTA",8,157.74,10.81,-0.03,0.03,2.97,1.05,0,"1 nonsynonymous","T3D",1
"lib2","SARS-CoV-2","TTGGTGCGAACTAGGT",2,52.1,10.82,-0.02,0.09,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGTGGCTGATTGCT",7,12.79,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","S19C A42F C102T W106L",4
"lib2","SARS-CoV-2","TTGGTGTCATAAAAAA",2,60.14,9.95,-0.88,0.08,2.74,1.08,0,">1 nonsynonymous","N58V S139C",2
"lib2","SARS-CoV-2","TTGGTGTGAAAAAACC",13,116.5,9.78,-1.06,0.09,2.49,1.06,0,"1 nonsynonymous","A89N",1
"lib2","SARS-CoV-2","TTGGTGTGATCCCTTA",3,99.42,10.69,-0.15,0.03,2.91,1.05,0,">1 nonsynonymous","S41V V173R",2
"lib2","SARS-CoV-2","TTGGTGTTTAAAAATA",8,142.78,10.79,-0.05,0.04,2.92,1.07,0,">1 nonsynonymous","N107A L122K",2
"lib2","SARS-CoV-2","TTGGTTAAAAACCTTT",1,3.22,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P149R",1
"lib2","SARS-CoV-2","TTGGTTAAATCATATT",4,7.55,6,-4.84,2,3,1.09,0.01,">1 nonsynonymous","D90L D112Q T148A",3
"lib2","SARS-CoV-2","TTGGTTAACCGTGCTG",5,93.92,10.84,0,0.03,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGGTTAAGCAGAGAC",10,2.29,NA,NA,NA,NA,NA,NA,"stop","N4A Y39R K87S C150*",4
"lib2","SARS-CoV-2","TTGGTTAAGTATGGAC",1,29.59,10.09,-0.74,0.09,2.95,1.05,0.01,">1 nonsynonymous","C61I K87G",2
"lib2","SARS-CoV-2","TTGGTTACAATATATA",10,130.49,10.26,-0.57,0.04,2.8,1.02,0,">1 nonsynonymous","L5T F44M D59G",3
"lib2","SARS-CoV-2","TTGGTTAGCTAAGACA",4,2.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19I C61V S129F G155I",4
"lib2","SARS-CoV-2","TTGGTTATTATTCCTG",4,45.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R16C N40R N120C F156W Y178S",5
"lib2","SARS-CoV-2","TTGGTTCATAACCAAT",15,189.63,9.54,-1.29,0.07,2.64,1.03,0,">1 nonsynonymous","A22R N64A N107E",3
"lib2","SARS-CoV-2","TTGGTTCCCCTATCCC",3,24.45,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","F44V N92F N107H Y175I",4
"lib2","SARS-CoV-2","TTGGTTCGATCCCGCA",2,32.07,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","V71K G86D",2
"lib2","SARS-CoV-2","TTGGTTCTCCGGCGTG",4,58.16,8.16,-2.68,0.14,2.54,1.09,0.01,">1 nonsynonymous","I142G H189I",2
"lib2","SARS-CoV-2","TTGGTTCTTCTTCAGA",4,68.39,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","G86E P177G",2
"lib2","SARS-CoV-2","TTGGTTGAATGTAGGT",5,16.15,6,-4.84,2,3,1.14,0,">1 nonsynonymous","A42F D75W L95F L122S",4
"lib2","SARS-CoV-2","TTGGTTGTTAGTAGAA",4,36.74,6,-4.84,2,1.5,1.29,0.04,"1 nonsynonymous","F99S",1
"lib2","SARS-CoV-2","TTGGTTTAATTCGTAA",3,21.91,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","L57P Q84M V103R G116P Q176K T201R",6
"lib2","SARS-CoV-2","TTGGTTTCCTCCTTAA",5,0.29,NA,NA,NA,NA,NA,NA,"stop","N30* S41I G51K Q84W G101V G174P",6
"lib2","SARS-CoV-2","TTGGTTTCCTTGTAGC",5,66.2,8.55,-2.28,0.1,2.09,1.07,0,">1 nonsynonymous","P54S Q176R",2
"lib2","SARS-CoV-2","TTGGTTTGACTCGATC",1,33.39,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","F12E I88A G155A",3
"lib2","SARS-CoV-2","TTGGTTTGGTAATAGC",10,116.45,9.37,-1.47,0.05,1.84,1.05,0,">1 nonsynonymous","D90M K128N P149S Y178T",4
"lib2","SARS-CoV-2","TTGGTTTGGTAGACAG",13,38.35,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","F99R I142L S200M",3
"lib2","SARS-CoV-2","TTGGTTTTACAACACA",9,117.6,10.82,-0.02,0.06,2.92,1.08,0,">1 nonsynonymous","T3Y V37S",2
"lib2","SARS-CoV-2","TTGTAAAAAAGTGGCT",1,2.56,NA,NA,NA,NA,NA,NA,"stop","C49* K87N G117M Y178S",4
"lib2","SARS-CoV-2","TTGTAAAAACTGATTT",2,23.83,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","N120M K128H I138N P177W S200C",5
"lib2","SARS-CoV-2","TTGTAAAAATATAAAG",1,87.68,10.82,-0.02,0.08,2.8,1.21,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTAAAACCCGACGC",3,0.65,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60Y",1
"lib2","SARS-CoV-2","TTGTAAAACTCAGACT",7,52.01,6,-4.84,2,1.5,1.27,0.04,">1 nonsynonymous","D90V R136S L183K",3
"lib2","SARS-CoV-2","TTGTAAAAGCCTGACG",1,15.12,NA,NA,NA,NA,NA,0.27,">1 nonsynonymous","T55C W106C P161R P177A",4
"lib2","SARS-CoV-2","TTGTAAAATTAAAGAC",2,85.99,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V37G T63V I142R V153I Y159L",5
"lib2","SARS-CoV-2","TTGTAAACAATATAGA",5,102.31,6.07,-4.77,0.65,1.5,1.13,0.01,">1 nonsynonymous","G9Q N40D P54R C150I",4
"lib2","SARS-CoV-2","TTGTAAACCCAAAGTA",1,13.37,10.71,-0.12,0.02,2.99,1.02,0,"1 nonsynonymous","Q84L",1
"lib2","SARS-CoV-2","TTGTAAACCGCAATTA",8,106.52,10.3,-0.54,0.03,2.94,1.06,0,"1 nonsynonymous","Y121I",1
"lib2","SARS-CoV-2","TTGTAAACTAGAAGAA",8,49.96,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","G101E Y119S",2
"lib2","SARS-CoV-2","TTGTAAAGAAATGCAT",3,1.86,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L A81S Y123R",3
"lib2","SARS-CoV-2","TTGTAAAGAATGTAAT",1,42.82,9.99,-0.84,0.1,2.48,1.08,0.01,">1 nonsynonymous","V77Q T85K",2
"lib2","SARS-CoV-2","TTGTAAAGCCATGAAA",2,6.29,10.57,-0.26,0.1,3,1,0,">1 nonsynonymous","E141L N151Y",2
"lib2","SARS-CoV-2","TTGTAAATACATAAAG",13,117.92,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","P82G F99L N120E",3
"lib2","SARS-CoV-2","TTGTAAATATATGCCT",2,15.62,10.65,-0.19,0.06,2.95,1.03,0,"1 nonsynonymous","G51S",1
"lib2","SARS-CoV-2","TTGTAAATCAGGGAAT",7,245.42,7.77,-3.07,0.13,1.5,1.07,0.01,">1 nonsynonymous","N1M Q176I",2
"lib2","SARS-CoV-2","TTGTAACAATTGACAT",8,80.83,6,-4.84,2,3,1.12,0,">1 nonsynonymous","I2G V71E G117D",3
"lib2","SARS-CoV-2","TTGTAACAATTGTCTT",11,190.89,10.02,-0.82,0.07,2.15,1.06,0,">1 nonsynonymous","W106Q N151F",2
"lib2","SARS-CoV-2","TTGTAACCCCTGGTAC",1,65.35,8.95,-1.89,0.06,2.96,1.06,0,">1 nonsynonymous","A14N S19N L125V",3
"lib2","SARS-CoV-2","TTGTAACCGTCTCACC",8,42.6,10.84,0,0.05,2.97,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTAACCTCCAGAGA",2,10.76,6.39,-4.44,0.79,1.5,1.12,0.05,">1 nonsynonymous","A22V D90R A105G",3
"lib2","SARS-CoV-2","TTGTAACCTTAAAGAT",6,23.01,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C6L L95Q N157T",3
"lib2","SARS-CoV-2","TTGTAACGAAATTCCT",11,0.15,NA,NA,NA,NA,NA,NA,"stop","C6* N24C I104M Y123R N151Q G174*",6
"lib2","SARS-CoV-2","TTGTAACTACTGCATT",3,109.14,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6Y C31A A81D Y175K",4
"lib2","SARS-CoV-2","TTGTAACTGCTATCGT",4,9.5,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","D34H D98K D112E E135S",4
"lib2","SARS-CoV-2","TTGTAACTTTGTGAAA",2,1.05,NA,NA,NA,NA,NA,NA,"stop","C61N I88* D98F V103I",4
"lib2","SARS-CoV-2","TTGTAAGATACACATG",3,60.03,9.9,-0.94,0.08,2.22,1.03,0,">1 nonsynonymous","F12W V37Y K56A Q144N",4
"lib2","SARS-CoV-2","TTGTAAGATCAACACC",3,16.92,6.03,-4.81,0.85,3,1.12,0.02,">1 nonsynonymous","W23S C49F C61S D68R",4
"lib2","SARS-CoV-2","TTGTAAGCGGAACGAA",11,2.75,NA,NA,NA,NA,NA,NA,"stop","L38K F44* G86F W106* C150L",5
"lib2","SARS-CoV-2","TTGTAATAAAGAAGAA",10,31.98,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","I80W K94V K128G",3
"lib2","SARS-CoV-2","TTGTAATACGTCCGCT",1,17.76,10.86,0.02,0.06,3,1.03,0,"1 nonsynonymous","L122C",1
"lib2","SARS-CoV-2","TTGTAATAGAAAAGTT",16,161.77,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","T55P N64K Y91W R136L Y143D",5
"lib2","SARS-CoV-2","TTGTAATAGTCATATT",1,0.06,NA,NA,NA,NA,NA,NA,"stop","S43* G83Y I88R",3
"lib2","SARS-CoV-2","TTGTAATATGCAAATA",1,9.61,9.06,-1.78,0.21,1.85,1.1,0.01,">1 nonsynonymous","Y39D Q84L F134H P149L",4
"lib2","SARS-CoV-2","TTGTAATATGTCTGAA",3,84.29,9.44,-1.4,0.07,2.72,1.06,0,">1 nonsynonymous","I142Q V173G P197H",3
"lib2","SARS-CoV-2","TTGTAATCATTATGGA",6,0.45,NA,NA,NA,NA,NA,NA,"stop","N4* S19F A81T Y93T F156H S200F",6
"lib2","SARS-CoV-2","TTGTACAAGTAAAGTC",4,57.37,10.8,-0.03,0.07,2.93,1.1,0,"1 nonsynonymous","T201V",1
"lib2","SARS-CoV-2","TTGTACACTACTATGG",6,1.33,NA,NA,NA,NA,NA,NA,"stop","Y165I Q176*",2
"lib2","SARS-CoV-2","TTGTACACTTGAACTG",5,39.82,8.19,-2.65,0.16,2.47,1.02,0.01,">1 nonsynonymous","G9D Y119L I142K",3
"lib2","SARS-CoV-2","TTGTACAGTGCTAGCT",13,5.53,NA,NA,NA,NA,NA,NA,"stop","K56* K87N W106F",3
"lib2","SARS-CoV-2","TTGTACATACAAATAT",1,1.16,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","N92H",1
"lib2","SARS-CoV-2","TTGTACCACTGGACAA",2,2.38,NA,NA,NA,NA,NA,NA,"stop","K56* R179T",2
"lib2","SARS-CoV-2","TTGTACCCACCTCTTT",3,58.91,10.18,-0.65,0.1,2.53,1.03,0,">1 nonsynonymous","N58G Y66N E141W",3
"lib2","SARS-CoV-2","TTGTACCCATAACATA",8,107.31,6,-4.84,1.48,1.5,1.17,0.01,">1 nonsynonymous","R16I I80G F99E Y119L R136K Y165G P177Q",7
"lib2","SARS-CoV-2","TTGTACCGCGATTAAT",3,0.26,NA,NA,NA,NA,NA,NA,"stop","R27Q Y35* A81V G116N I142M",5
"lib2","SARS-CoV-2","TTGTACCGGATCCGGC",1,7.97,10.26,-0.57,0.15,2.66,1.06,0.01,">1 nonsynonymous","R27G N64W",2
"lib2","SARS-CoV-2","TTGTACGAATAAATAA",1,8.88,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","G9T F44V R124L Q176L L183P T201C",6
"lib2","SARS-CoV-2","TTGTACGACATGCCAT",4,49.74,10.61,-0.22,0.05,2.94,1.07,0,">1 nonsynonymous","T3P G116K",2
"lib2","SARS-CoV-2","TTGTACGTACCAAATG",1,4.98,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D34Y L60S V103C",3
"lib2","SARS-CoV-2","TTGTACGTATTTTGGT",4,58.46,10.51,-0.33,0.04,3,1.01,0,">1 nonsynonymous","Q79D P197A",2
"lib2","SARS-CoV-2","TTGTACTACGTTTCTT",4,55.89,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A18S W106L G172E",3
"lib2","SARS-CoV-2","TTGTACTCAGTTAATG",1,77.72,10.59,-0.25,0.05,3,1.03,0,">1 nonsynonymous","L5Y K87I",2
"lib2","SARS-CoV-2","TTGTACTCCACACATA",7,36.41,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","A18V Q84S N107I S113T Y121K K198Q",6
"lib2","SARS-CoV-2","TTGTACTCCGTTCACA",4,7.74,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","P82N Y91L R124A L183D K198Y",5
"lib2","SARS-CoV-2","TTGTACTCGAAAACAT",5,82.68,10.33,-0.5,0.05,2.93,1.06,0,">1 nonsynonymous","P7D P82V K87I",3
"lib2","SARS-CoV-2","TTGTACTGGACCTACC",8,139.58,10.8,-0.03,0.02,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTAGAAGGTGTAAT",2,3.69,NA,NA,NA,NA,NA,NA,"stop","K56L F99W G146*",3
"lib2","SARS-CoV-2","TTGTAGACATTGGAAA",3,0.12,NA,NA,NA,NA,NA,NA,"stop","T3N D90N W106* Y143*",4
"lib2","SARS-CoV-2","TTGTAGAGTACGCTGA",7,80.84,9.7,-1.13,0.08,2.1,1.02,0,"1 nonsynonymous","G86S",1
"lib2","SARS-CoV-2","TTGTAGCTAGACTTCG",1,25.47,8.82,-2.02,0.17,1.73,1,0.01,">1 nonsynonymous","A105K P149S Q168S",3
"lib2","SARS-CoV-2","TTGTAGCTTATGCTCA",1,28.35,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","A14N A105G S113C I138P",4
"lib2","SARS-CoV-2","TTGTAGTACACGCAAA",6,79.13,10.12,-0.72,0.06,3,1,0,"1 nonsynonymous","E154L",1
"lib2","SARS-CoV-2","TTGTATAAACCAAACA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","S19* V37S L57R A67R K87*",5
"lib2","SARS-CoV-2","TTGTATAAACCCGCAA",4,54.76,10.01,-0.83,0.08,2.8,1.04,0,">1 nonsynonymous","T85S K132N V173P",3
"lib2","SARS-CoV-2","TTGTATAAAGAGGTTG",2,6.51,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","G9E S29W C61D D90M I104K",5
"lib2","SARS-CoV-2","TTGTATAACCTAAAAA",3,15.97,6,-4.84,2,1.5,1.31,0.05,">1 nonsynonymous","S41G G86S E154N",3
"lib2","SARS-CoV-2","TTGTATAAGACACATT",5,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35P K56D T85L E135T",4
"lib2","SARS-CoV-2","TTGTATAAGATAACTA",5,25.17,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","S53G D68Q V173Y",3
"lib2","SARS-CoV-2","TTGTATAAGCATGTGT",11,113.59,9.84,-0.99,0.1,2.43,1,0,">1 nonsynonymous","L60P N107P S139T",3
"lib2","SARS-CoV-2","TTGTATACTTCGAGAT",4,29.51,9.85,-0.98,0.13,2.69,1,0.01,">1 nonsynonymous","F12L F47Y",2
"lib2","SARS-CoV-2","TTGTATAGATCCCAAC",13,1.26,NA,NA,NA,NA,NA,NA,"stop","V11R D98M N110M G146* N151Q P197A",6
"lib2","SARS-CoV-2","TTGTATAGCATCATAA",2,5.37,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","A14C A42G L95Q R127H F160S",5
"lib2","SARS-CoV-2","TTGTATATTAATGAGA",1,10.16,10.86,0.02,0.05,2.93,1.09,0,">1 nonsynonymous","D90S N120Q",2
"lib2","SARS-CoV-2","TTGTATCAAAAAAGAC",2,30.73,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","G155S P161L K199A",3
"lib2","SARS-CoV-2","TTGTATCAATTATAGA",2,54.89,10.47,-0.37,0.04,2.93,1.09,0,">1 nonsynonymous","C61N G155T",2
"lib2","SARS-CoV-2","TTGTATCACACATTCG",5,27.01,10.19,-0.64,0.09,2.75,1.04,0,">1 nonsynonymous","G9K F62E",2
"lib2","SARS-CoV-2","TTGTATCATGTAATTT",3,19.26,8.6,-2.24,0.14,1.94,1.05,0.01,">1 nonsynonymous","G9W R127L",2
"lib2","SARS-CoV-2","TTGTATCATGTATTAT",2,11.5,6.37,-4.47,0.81,1.5,1.13,0.04,">1 nonsynonymous","A22T V37C K56M I88Q",4
"lib2","SARS-CoV-2","TTGTATCTAAAATATT",4,103.27,10.8,-0.04,0.05,2.97,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGTATCTAGGTTTTT",4,121.01,10.83,-0.01,0.06,2.92,1.09,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","TTGTATGAAAGGAATG",2,16.92,9.53,-1.31,0.04,2.89,1,0,"1 nonsynonymous","Y119A",1
"lib2","SARS-CoV-2","TTGTATGAAGACATAC",1,3.61,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L I28N D98P N118F R127W",5
"lib2","SARS-CoV-2","TTGTATGATACCCCGC",1,0.77,NA,NA,NA,NA,NA,NA,"stop","L95Q T140*",2
"lib2","SARS-CoV-2","TTGTATGCCAAACCAA",3,18.4,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","R179G P197T",2
"lib2","SARS-CoV-2","TTGTATGTAAAAAGGG",2,27.16,10.78,-0.05,0.09,2.9,1.14,0,"1 nonsynonymous","R16F",1
"lib2","SARS-CoV-2","TTGTATGTAATACCAG",5,43.75,6.94,-3.89,0.35,1.5,1.11,0.03,">1 nonsynonymous","C6E G51I",2
"lib2","SARS-CoV-2","TTGTATGTATATATCT",22,178.72,8.46,-2.37,0.08,2.37,1.1,0,">1 nonsynonymous","E135M G155P",2
"lib2","SARS-CoV-2","TTGTATTAATATATAT",3,25.33,9.57,-1.27,0.11,2.57,1.05,0.01,">1 nonsynonymous","A42I N109M I142F",3
"lib2","SARS-CoV-2","TTGTATTAGCTAGCAG",3,0.84,NA,NA,NA,NA,NA,NA,"stop","L60H K87* N120V I142N",4
"lib2","SARS-CoV-2","TTGTATTGAAAAATTC",9,150.87,10.55,-0.29,0.04,2.93,1.06,0,"1 nonsynonymous","P133S",1
"lib2","SARS-CoV-2","TTGTATTGCCCGGTCA",5,106.12,9.73,-1.11,0.03,2.92,1.09,0,">1 nonsynonymous","I2R N118E L125F",3
"lib2","SARS-CoV-2","TTGTATTTACCATAAA",8,44.6,6,-4.84,0.79,3,1.15,0,">1 nonsynonymous","F99S S129C",2
"lib2","SARS-CoV-2","TTGTATTTATAACTTT",1,26.59,6,-4.84,2,3,1.18,0,">1 nonsynonymous","A67I N92L V103G Y119G",4
"lib2","SARS-CoV-2","TTGTATTTGTGTCGAC",3,111.37,10.74,-0.1,0.05,2.95,1.07,0,"1 nonsynonymous","K114V",1
"lib2","SARS-CoV-2","TTGTCAAAAACAGTAA",5,557.04,10.27,-0.56,0.02,2.94,1.03,0,">1 nonsynonymous","C61Y P149C",2
"lib2","SARS-CoV-2","TTGTCAAAAGACCCAT",2,1.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58E F156K",2
"lib2","SARS-CoV-2","TTGTCAAACTCAAATA",2,36.05,10.65,-0.19,0.05,2.91,1.11,0,"1 nonsynonymous","K48A",1
"lib2","SARS-CoV-2","TTGTCAAACTTTTAAA",5,26.65,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","D68N Y119R",2
"lib2","SARS-CoV-2","TTGTCAACTGAGTACG",1,0.78,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q84L L162P T201A",3
"lib2","SARS-CoV-2","TTGTCAAGACACTTTG",3,21.81,10.79,-0.04,0.03,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTCAAGCCTAAACT",8,101.39,10.14,-0.69,0.05,2.89,1.08,0,"1 nonsynonymous","G155V",1
"lib2","SARS-CoV-2","TTGTCACAACTAAATA",3,49.94,10.76,-0.07,0.07,2.79,1.23,0,">1 nonsynonymous","G9N Y39K T85S",3
"lib2","SARS-CoV-2","TTGTCACAAGTCAACA",1,0,NA,NA,NA,NA,NA,NA,"stop","C31F Y123* L131F N157C",4
"lib2","SARS-CoV-2","TTGTCACAGGCTAACA",3,26.6,9.09,-1.74,0.25,1.5,1.04,0.03,">1 nonsynonymous","E76S N120S K128L",3
"lib2","SARS-CoV-2","TTGTCACCAGCTGTAC",2,26.16,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","C49V F70G V115Q P149D",4
"lib2","SARS-CoV-2","TTGTCACCGCTAGTGG",1,2.01,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TTGTCACGAACAGGGT",6,59.06,10.66,-0.18,0.05,2.91,1.09,0,"1 nonsynonymous","E135A",1
"lib2","SARS-CoV-2","TTGTCACTAACTTAAA",8,15.49,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A105R N118V",2
"lib2","SARS-CoV-2","TTGTCACTATCAGGTA",3,24.06,10.4,-0.43,0.05,2.99,1.03,0,">1 nonsynonymous","V65L F156A",2
"lib2","SARS-CoV-2","TTGTCAGACCGAGACG",5,92.05,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N13F V115G A145Y",3
"lib2","SARS-CoV-2","TTGTCAGAGTGAAATG",4,24.82,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","V52H C61S D68I G101D",4
"lib2","SARS-CoV-2","TTGTCAGGAGGCTATG",5,70.97,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","L5F I28T T55F D75R V103C",5
"lib2","SARS-CoV-2","TTGTCAGGCAGGAACT",1,21.05,10.28,-0.56,0.08,2.83,1.14,0,">1 nonsynonymous","V37S S45P T140K K198W",4
"lib2","SARS-CoV-2","TTGTCAGGGTTTGAAT",23,152.96,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","D68K G86C D98G F167M",4
"lib2","SARS-CoV-2","TTGTCAGTAATAAGAT",2,20.03,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","A14F A81T V103T",3
"lib2","SARS-CoV-2","TTGTCATAATACGCTT",3,61.24,10.62,-0.22,0.06,3,1.02,0,">1 nonsynonymous","G9K N130Y",2
"lib2","SARS-CoV-2","TTGTCATCTCATACAG",1,20.35,10.81,-0.02,0.07,2.82,1.17,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTCATTAAGTAACT",10,126.69,10.61,-0.22,0.04,2.96,1.05,0,">1 nonsynonymous","P7A S29G P149K",3
"lib2","SARS-CoV-2","TTGTCATTCGAATATA",3,0,NA,NA,NA,NA,NA,NA,"stop","N4K V77* L131D G146W T201S",5
"lib2","SARS-CoV-2","TTGTCCAAAGAAAAAC",5,10.96,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","T15N Y93S",2
"lib2","SARS-CoV-2","TTGTCCACATATGGAG",5,125.7,10.79,-0.05,0.04,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTCCACCCCACTAG",2,3.92,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41W C49L L95R G116F K128R E135V",6
"lib2","SARS-CoV-2","TTGTCCAGTTACTTAT",3,48.53,10.7,-0.14,0.04,2.86,1.1,0,"1 nonsynonymous","I88V",1
"lib2","SARS-CoV-2","TTGTCCATAAATAACT",5,80.15,8.39,-2.45,0.06,2.27,1.06,0,">1 nonsynonymous","C6G D59F Y119T",3
"lib2","SARS-CoV-2","TTGTCCCACCGCAAAC",4,41.91,10.73,-0.1,0.04,2.96,1.06,0,"1 nonsynonymous","D90A",1
"lib2","SARS-CoV-2","TTGTCCCATTTAATTG",1,0,NA,NA,NA,NA,NA,NA,"stop","C6F F12R L38P S45* P197T",5
"lib2","SARS-CoV-2","TTGTCCCCCCAGAAAG",13,135.52,10.72,-0.11,0.03,2.93,1.07,0,">1 nonsynonymous","N64S D97V",2
"lib2","SARS-CoV-2","TTGTCCCTAACTATAG",1,29.76,9.55,-1.28,0.1,2.71,1.1,0.01,"1 nonsynonymous","R73A",1
"lib2","SARS-CoV-2","TTGTCCGACTAGAATG",1,28.42,9.31,-1.53,0.09,2.21,1.07,0,">1 nonsynonymous","T3A R73T D90S",3
"lib2","SARS-CoV-2","TTGTCCGAGTCACAAT",5,39.45,9.48,-1.35,0.18,2.36,1.03,0.04,">1 nonsynonymous","A89C L122S Q168K V173M",4
"lib2","SARS-CoV-2","TTGTCCTTGACATATT",4,120.68,10.1,-0.74,0.06,2.95,1.04,0,">1 nonsynonymous","R73S V173M",2
"lib2","SARS-CoV-2","TTGTCCTTGGACAAGC",11,68.01,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","P96K W106S Y121M F134A L188T",5
"lib2","SARS-CoV-2","TTGTCGAAACACAGTG",3,41.16,6,-4.84,1.55,1.5,1.2,0.03,">1 nonsynonymous","D68Q G83W V103M L125R",4
"lib2","SARS-CoV-2","TTGTCGACCAACCCAT",2,69.18,10.65,-0.19,0.03,2.92,1.09,0,">1 nonsynonymous","V77L F160D",2
"lib2","SARS-CoV-2","TTGTCGACCTGGCAAG",14,70.43,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","V37W Y91D A105K D112M",4
"lib2","SARS-CoV-2","TTGTCGACGCATAAAT",5,49.03,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","A33G F70V T140K G155Y",4
"lib2","SARS-CoV-2","TTGTCGAGCTAAGACC",1,14.69,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","C49L A105K",2
"lib2","SARS-CoV-2","TTGTCGAGTTCTGTGA",2,87.61,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","E10M N40Q K114T D137K",4
"lib2","SARS-CoV-2","TTGTCGATACTCAGAG",5,3.02,NA,NA,NA,NA,NA,NA,"stop","L5V I28L N58* V103W",4
"lib2","SARS-CoV-2","TTGTCGGATACCAGTT",3,24.02,10.8,-0.04,0.1,2.88,1.01,0,"1 nonsynonymous","G9P",1
"lib2","SARS-CoV-2","TTGTCGGGGCAAATTA",4,42.64,9.13,-1.7,0.1,2.27,1.06,0,">1 nonsynonymous","C6F G152C",2
"lib2","SARS-CoV-2","TTGTCGGTATCTTTAG",3,0.89,NA,NA,NA,NA,NA,NA,"stop","Y119* T148M Y159I",3
"lib2","SARS-CoV-2","TTGTCGGTCTGTATAA",8,28.06,9.03,-1.81,0.3,1.93,1.12,0.04,">1 nonsynonymous","Q84G V103A N130I",3
"lib2","SARS-CoV-2","TTGTCGTTGGTTAACA",11,21.42,6,-4.84,2,1.5,1.35,0.05,">1 nonsynonymous","T3R A105E",2
"lib2","SARS-CoV-2","TTGTCTAGCTTGTTGG",2,0,NA,NA,NA,NA,NA,NA,"stop","Y91G L95* P169F",3
"lib2","SARS-CoV-2","TTGTCTAGTGCATATC",20,442.08,10.48,-0.35,0.02,2.89,1.06,0,">1 nonsynonymous","A33V F47V N151K",3
"lib2","SARS-CoV-2","TTGTCTATAATAATGA",8,139.01,8.81,-2.03,0.06,2.94,1.1,0,">1 nonsynonymous","P7S Y119C",2
"lib2","SARS-CoV-2","TTGTCTATCAGTACAA",4,1.87,NA,NA,NA,NA,NA,NA,"stop","E10M L60* G83F Y91M N110F K128Y T170V",7
"lib2","SARS-CoV-2","TTGTCTCCAACTCCCG",4,32.87,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K56G I72M I88E K114W F134V",5
"lib2","SARS-CoV-2","TTGTCTCCACAGCCTA",8,157.06,10.84,0,0.03,2.98,1.03,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","TTGTCTCGCGGCGTTG",3,39.57,10.28,-0.55,0.06,2.9,1.07,0,">1 nonsynonymous","S43N G83D",2
"lib2","SARS-CoV-2","TTGTCTCGTCTACCAC",15,153.11,10.49,-0.35,0.02,2.96,1.03,0,">1 nonsynonymous","Y121M S200M",2
"lib2","SARS-CoV-2","TTGTCTCTCACCATAA",1,29.88,10.77,-0.06,0.06,2.83,1.18,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTCTCTTATAATAT",1,17.76,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","D90T F99T K198L",3
"lib2","SARS-CoV-2","TTGTCTGCATTACGGT",8,72.96,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","P7K S43L I88Y V115A R124I T148G S164H",7
"lib2","SARS-CoV-2","TTGTCTGCCAAAACAA",1,35.34,10.71,-0.13,0.07,2.93,1.09,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","TTGTCTGGACAAACGT",12,79.12,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","E135V C158Q T201R",3
"lib2","SARS-CoV-2","TTGTCTGTATTGCAAG",4,30.7,6,-4.84,2,3,1.08,0,">1 nonsynonymous","L38K G86V",2
"lib2","SARS-CoV-2","TTGTCTTAAATCAAAA",2,43.27,9.62,-1.21,0.06,2.94,1.05,0,"1 nonsynonymous","S113T",1
"lib2","SARS-CoV-2","TTGTCTTCTCCTGCCT",4,32.51,9.06,-1.78,0.21,1.5,1,0.02,">1 nonsynonymous","A89Y G155R",2
"lib2","SARS-CoV-2","TTGTCTTGTCTCGTAA",16,253.16,10.81,-0.03,0.04,2.96,1.04,0,"1 nonsynonymous","T3S",1
"lib2","SARS-CoV-2","TTGTGAAAGACATTCT",8,0.28,NA,NA,NA,NA,NA,NA,"stop","C61D Y175*",2
"lib2","SARS-CoV-2","TTGTGAACTATTTCCG",5,2.1,NA,NA,NA,NA,NA,NA,"stop","G9M Y35* A105*",3
"lib2","SARS-CoV-2","TTGTGAATAAATTAAA",7,167.01,9.07,-1.76,0.07,2.87,1.07,0,"1 nonsynonymous","F126T",1
"lib2","SARS-CoV-2","TTGTGAATAATGGCAG",3,10.96,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","R136L C158V",2
"lib2","SARS-CoV-2","TTGTGACACAACCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N64P G74C R78H I104* F134I",5
"lib2","SARS-CoV-2","TTGTGACAGCCAACCA",21,158.63,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","D90S T100S Y165T V180M",4
"lib2","SARS-CoV-2","TTGTGACCAAATTAGC",4,38.83,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","N40T C61N D68G",3
"lib2","SARS-CoV-2","TTGTGACCAACTCATT",1,37.46,10.34,-0.5,0.07,2.85,1.14,0,">1 nonsynonymous","A42K P169M",2
"lib2","SARS-CoV-2","TTGTGACCACTGTGAA",4,31.76,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","I28K G86R L95T S108K",4
"lib2","SARS-CoV-2","TTGTGACGGCTAATAT",1,18.62,10.91,0.08,0.04,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTGACTAGGATCAG",6,88.07,6.19,-4.64,0.68,1.5,1.23,0.02,">1 nonsynonymous","R25L I138M",2
"lib2","SARS-CoV-2","TTGTGAGTATAAGATG",3,35,9.6,-1.24,0.13,1.94,1.04,0.01,">1 nonsynonymous","Y66A A105G",2
"lib2","SARS-CoV-2","TTGTGAGTGAAGTCCG",4,27.76,6,-4.84,1.33,3,1.25,0.01,">1 nonsynonymous","K48P N92W",2
"lib2","SARS-CoV-2","TTGTGATAGATTTCAA",4,25.75,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","N13S Y91I D98H A105W",4
"lib2","SARS-CoV-2","TTGTGATTATCAACAG",2,47.33,9.15,-1.68,0.06,1.86,1.1,0,">1 nonsynonymous","E10R V37T Y121W T201E",4
"lib2","SARS-CoV-2","TTGTGATTTATGATAA",2,50.14,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G101C N107R S184R",3
"lib2","SARS-CoV-2","TTGTGCACACAGATTT",4,2.73,NA,NA,NA,NA,NA,NA,"stop","R27* V103G N110T R136A",4
"lib2","SARS-CoV-2","TTGTGCACAGCCAAAA",3,53.26,10.74,-0.09,0.09,2.87,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTGCACATTTCCGC",2,8.09,6.1,-4.74,0.71,1.5,1.07,0.01,">1 nonsynonymous","K48G L95T D112Y L162S",4
"lib2","SARS-CoV-2","TTGTGCATGACAAACG",8,175.66,8.42,-2.42,0.04,2.73,1.07,0,">1 nonsynonymous","S45R T170C",2
"lib2","SARS-CoV-2","TTGTGCCATGCCTTAG",1,1.48,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L38F S41Y",2
"lib2","SARS-CoV-2","TTGTGCGTATCGTGTA",7,45.95,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","A14R G51K G101S S139C N157E S164N",6
"lib2","SARS-CoV-2","TTGTGCTATGGAGAGC",4,0,NA,NA,NA,NA,NA,NA,"stop","P54T G146* N151Y Y178H",4
"lib2","SARS-CoV-2","TTGTGCTCTAGATACC",3,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F8G P82K N120D",3
"lib2","SARS-CoV-2","TTGTGCTGCGCGCTTA",2,9.95,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","E10I Y39A K87F G146K F160I",5
"lib2","SARS-CoV-2","TTGTGCTGGTTATATA",6,275.63,10.85,0.01,0.06,2.91,1.1,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGTGCTTGAACGAGG",2,0.83,NA,NA,NA,NA,NA,NA,"stop","Y50M V77* D98A",3
"lib2","SARS-CoV-2","TTGTGCTTGTCTTAAA",1,13.19,6,-4.84,1.28,3,1.05,0,">1 nonsynonymous","T46H L60R K114N R127L E135W",5
"lib2","SARS-CoV-2","TTGTGGACCAATACAC",15,162.16,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9P N92P S113F P169Q",4
"lib2","SARS-CoV-2","TTGTGGATAACTATCT",15,239.07,8.39,-2.45,0.17,1.5,1.09,0.01,">1 nonsynonymous","C6N S45R E141L",3
"lib2","SARS-CoV-2","TTGTGGATTTGGACTT",1,3.75,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G174W",1
"lib2","SARS-CoV-2","TTGTGGCGATACCACC",12,65.05,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","L60K V77S T100S L131S",4
"lib2","SARS-CoV-2","TTGTGGGTTTCTGCGA",2,9.39,9.11,-1.73,0.27,2.66,1,0.03,">1 nonsynonymous","S41V Y119C",2
"lib2","SARS-CoV-2","TTGTGGTCTTGCAGCG",3,0.59,NA,NA,NA,NA,NA,NA,"stop","A33* V173T",2
"lib2","SARS-CoV-2","TTGTGGTGCCCCAACT",4,26.92,6.27,-4.57,0.81,1.5,1.18,0.03,">1 nonsynonymous","A89L G101S",2
"lib2","SARS-CoV-2","TTGTGGTTCCCGCCAA",6,132.58,10.54,-0.29,0.06,2.91,1.06,0,">1 nonsynonymous","L5H S184M",2
"lib2","SARS-CoV-2","TTGTGTAAACACGTTA",4,34.79,8.16,-2.67,0.4,1.5,1,0.07,"1 nonsynonymous","R25F",1
"lib2","SARS-CoV-2","TTGTGTCTCCATAGGG",14,46.6,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P54Y V103L Y159R G172L",4
"lib2","SARS-CoV-2","TTGTGTTAAACCGGTA",4,11.24,10.86,0.02,0.1,2.98,1.06,0,"1 nonsynonymous","K198N",1
"lib2","SARS-CoV-2","TTGTGTTATCAAAATA",9,43.55,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7T N13Y D75V Y91I C158I S184I",6
"lib2","SARS-CoV-2","TTGTTAAAATTCATAT",3,18.04,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","A89N L95G S200Q",3
"lib2","SARS-CoV-2","TTGTTAAACAACCAGT",8,94.72,10.36,-0.48,0.05,2.78,1.11,0,">1 nonsynonymous","T3I E154N",2
"lib2","SARS-CoV-2","TTGTTAAACCAGACAT",1,4.47,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","TTGTTAAATAAGTGAA",5,70.12,10.06,-0.78,0.06,2.85,1.02,0,">1 nonsynonymous","Y35C T148W F160Y",3
"lib2","SARS-CoV-2","TTGTTAAATATGGGTG",16,236.49,6.02,-4.82,0.55,1.5,1.17,0.01,">1 nonsynonymous","C158Y K199I",2
"lib2","SARS-CoV-2","TTGTTAAGTCTAAAGC",7,68.93,10.78,-0.06,0.07,2.85,1.15,0,"1 nonsynonymous","T55V",1
"lib2","SARS-CoV-2","TTGTTAAGTGCACAGG",2,20.09,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C6I D98F Y159M",3
"lib2","SARS-CoV-2","TTGTTAATCAATCCTA",1,17.55,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","V11D D68M T148I G155I",4
"lib2","SARS-CoV-2","TTGTTAATCACCAACG",5,32.86,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","E10R V65K K128A Y165A Q176K S200M",6
"lib2","SARS-CoV-2","TTGTTAATTGATATCC",3,94.52,10.75,-0.08,0.03,3,1.02,0,"1 nonsynonymous","V115A",1
"lib2","SARS-CoV-2","TTGTTAATTTCACTGA",2,30.61,6,-4.84,2,3,1.29,0.01,"1 nonsynonymous","V182F",1
"lib2","SARS-CoV-2","TTGTTACAGCCGCAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","E10* I80R G117S",3
"lib2","SARS-CoV-2","TTGTTACATACAGCAC",6,86.91,10.76,-0.07,0.04,2.92,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTTACATATACATT",1,8.41,10.76,-0.08,0.18,2.87,1.07,0.01,"1 nonsynonymous","T100H",1
"lib2","SARS-CoV-2","TTGTTACCTCACCTTT",3,55.63,10.73,-0.1,0.08,2.84,1.17,0,"1 nonsynonymous","Y66V",1
"lib2","SARS-CoV-2","TTGTTACGGCTTCGAA",11,207.29,10.83,0,0.04,2.91,1.1,0,"1 nonsynonymous","G9E",1
"lib2","SARS-CoV-2","TTGTTAGAAAAGTCCT",1,28.34,6,-4.84,2,1.5,1.18,0.03,"1 nonsynonymous","V20W",1
"lib2","SARS-CoV-2","TTGTTAGCGCCAAGAT",2,2.36,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103S L122W N151T F185V",4
"lib2","SARS-CoV-2","TTGTTAGGCCTTCGAA",4,118.67,10.66,-0.18,0.03,2.96,1.06,0,">1 nonsynonymous","H189L V194R T201S",3
"lib2","SARS-CoV-2","TTGTTATAAAATAAAC",2,9.64,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6G P54L D137R Q144V L162M",5
"lib2","SARS-CoV-2","TTGTTATACAGAAGAC",12,90.38,6,-4.84,2,3,1.17,0,">1 nonsynonymous","R27C C61K P82S Y119V P149L",5
"lib2","SARS-CoV-2","TTGTTATAGTACCTAG",1,30.51,10.19,-0.64,0.08,2.84,1.03,0,"1 nonsynonymous","S45V",1
"lib2","SARS-CoV-2","TTGTTATATTTAACGA",4,36.93,6,-4.84,2,1.5,1.24,0.01,">1 nonsynonymous","C61S D90Y F167G",3
"lib2","SARS-CoV-2","TTGTTATCGTATATAC",2,20.67,6,-4.84,2,1.5,1.23,0.05,">1 nonsynonymous","G9L Y93R P149S",3
"lib2","SARS-CoV-2","TTGTTATCTCCCATAG",19,245.4,8.04,-2.79,0.08,1.5,1.1,0,">1 nonsynonymous","G83L P161M",2
"lib2","SARS-CoV-2","TTGTTATGAAAATCAT",8,69.05,10.27,-0.57,0.05,2.88,1.08,0,"1 nonsynonymous","D34R",1
"lib2","SARS-CoV-2","TTGTTATGGTGGGAAC",1,17.53,10.74,-0.1,0.06,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TTGTTATTTGAGCCCT",5,54.5,10.82,-0.01,0.05,2.9,1.13,0,"1 nonsynonymous","L5S",1
"lib2","SARS-CoV-2","TTGTTCAAGGTCCGTT",2,1,NA,NA,NA,NA,NA,NA,"stop","N1K F8M G83D N92* P133E N171W T201K",7
"lib2","SARS-CoV-2","TTGTTCACAATGGATG",8,70.3,6.12,-4.72,1.19,1.5,1.43,0.04,">1 nonsynonymous","C6E R27P C49G N58D P96N L111H T140F L162N",8
"lib2","SARS-CoV-2","TTGTTCACCGGATAGG",1,11.56,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","L38W N64F C158N",3
"lib2","SARS-CoV-2","TTGTTCATCTATCCGT",2,21.13,6,-4.84,2,1.5,1.18,0.07,">1 nonsynonymous","N30C S36K V103L C150Y",4
"lib2","SARS-CoV-2","TTGTTCCATTGTGTTA",2,15.91,NA,NA,NA,NA,NA,0.26,">1 nonsynonymous","T3A L5A F12C V52R Y93N Y178E",6
"lib2","SARS-CoV-2","TTGTTCCCAAAATAGT",8,116.94,9.84,-0.99,0.07,2.64,1.04,0,">1 nonsynonymous","E10T Y123S Q144S",3
"lib2","SARS-CoV-2","TTGTTCCCATTTCCCT",3,15.54,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","I80R P149H",2
"lib2","SARS-CoV-2","TTGTTCCGCGCCCTAT",2,48.29,9.16,-1.68,0.1,2.45,1.09,0,">1 nonsynonymous","C61S I104M Y121A",3
"lib2","SARS-CoV-2","TTGTTCCGGTATTCCG",4,0.18,NA,NA,NA,NA,NA,NA,"stop","Y143S P149* G174Y",3
"lib2","SARS-CoV-2","TTGTTCCTACCGGTTT",6,9.3,NA,NA,NA,NA,NA,0.3,">1 nonsynonymous","S19P Y93S L162M L183E",4
"lib2","SARS-CoV-2","TTGTTCCTCCATAGCT",5,46.38,6,-4.84,2,3,1.11,0,">1 nonsynonymous","K48M C158R G174R",3
"lib2","SARS-CoV-2","TTGTTCGAACTACTAT",4,67.23,9.96,-0.88,0.07,1.98,1.07,0,">1 nonsynonymous","R16M W106K",2
"lib2","SARS-CoV-2","TTGTTCGATGGACTAC",5,3.65,NA,NA,NA,NA,NA,NA,"stop","I2H F62* N118P",3
"lib2","SARS-CoV-2","TTGTTCGCGAAATTGC",13,240.04,10.86,0.02,0.06,2.91,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTTCTTTATTACAG",2,56.29,10.73,-0.11,0.05,2.98,1.04,0,">1 nonsynonymous","G83H D97N",2
"lib2","SARS-CoV-2","TTGTTGACTTTTACCC",1,29.76,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","D75L P82S S139P",3
"lib2","SARS-CoV-2","TTGTTGAGGGTGACAG",1,17.92,10.8,-0.03,0.07,2.97,1.06,0,">1 nonsynonymous","A22S T148G",2
"lib2","SARS-CoV-2","TTGTTGCGAGTATCAT",5,62.21,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","C61S Y93S N120V",3
"lib2","SARS-CoV-2","TTGTTGCTATAAGATT",7,93.51,8.35,-2.48,0.12,2.23,1.11,0,">1 nonsynonymous","I28L D112T",2
"lib2","SARS-CoV-2","TTGTTGGAGAATAGAC",1,7.19,6.28,-4.56,1.3,1.5,1.05,0.01,">1 nonsynonymous","F99G N120R F126R",3
"lib2","SARS-CoV-2","TTGTTGGGTGATTATT",17,208.22,10.83,-0.01,0.02,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTGTTGTCCTTTGGGA",4,66.03,11.14,0.3,0.05,3,1,0,">1 nonsynonymous","Y35W N64I L122Q T201A",4
"lib2","SARS-CoV-2","TTGTTGTTAACGAAAA",1,0,NA,NA,NA,NA,NA,NA,"stop","A81* W106V",2
"lib2","SARS-CoV-2","TTGTTGTTCATCGACG",3,30.17,8.02,-2.81,0.13,1.5,1.05,0.01,">1 nonsynonymous","V32P D90V",2
"lib2","SARS-CoV-2","TTGTTGTTCTACTAAA",12,27.26,6.04,-4.8,1.09,2.45,1.32,0.01,">1 nonsynonymous","N1S G83E N107Q P149L Y165K P169M",6
"lib2","SARS-CoV-2","TTGTTTAAGCACCCTG",1,1.15,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K Y175S",2
"lib2","SARS-CoV-2","TTGTTTAATAATATAC",1,2.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10Q N107T S129T",3
"lib2","SARS-CoV-2","TTGTTTAATCAACAAA",8,70.73,9.26,-1.57,0.09,1.9,1.07,0,">1 nonsynonymous","A22H K94R K114E F134G T140F",5
"lib2","SARS-CoV-2","TTGTTTACATTGGTTA",14,94.67,6,-4.84,1.09,1.5,1.13,0,">1 nonsynonymous","Y35K L60R C102W C158T",4
"lib2","SARS-CoV-2","TTGTTTAGAGTCTTGA",11,72.05,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","N110A T140W F167G",3
"lib2","SARS-CoV-2","TTGTTTAGCGAGGTGC",8,123.33,6,-4.84,2,3,1.19,0,">1 nonsynonymous","Y21G R78S L95T N130A S184F",5
"lib2","SARS-CoV-2","TTGTTTCAGCGGTTGT",1,72.98,10,-0.84,0.11,2.53,1.03,0.01,">1 nonsynonymous","E10Q P161S",2
"lib2","SARS-CoV-2","TTGTTTCCCATCCCAT",3,15.14,6,-4.84,2,3,1.03,0,">1 nonsynonymous","F62D F70S G101M E141L P149Q Y175H",6
"lib2","SARS-CoV-2","TTGTTTCCCCTCTCCA",5,90.4,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","V71L G86H D112T T148P",4
"lib2","SARS-CoV-2","TTGTTTCTCTATGGAT",1,14.21,6,-4.84,2,1.5,1.32,0.07,">1 nonsynonymous","V77A F99C A105S Y123A",4
"lib2","SARS-CoV-2","TTGTTTCTGAAATGAA",3,12.24,7.52,-3.32,0.24,2.12,1.07,0.01,">1 nonsynonymous","S45I N118V",2
"lib2","SARS-CoV-2","TTGTTTGAAATCACAC",3,18.6,10.71,-0.12,0.11,2.87,1.15,0,"1 nonsynonymous","A190D",1
"lib2","SARS-CoV-2","TTGTTTGGCTTCACAT",4,69.25,6.14,-4.7,1.05,1.5,1.29,0.03,">1 nonsynonymous","D112L S139I",2
"lib2","SARS-CoV-2","TTGTTTTACTTGAACA",6,31.12,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","S43P G51V R73W K87C",4
"lib2","SARS-CoV-2","TTGTTTTCTTGGAGAA",10,48.67,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","A14K C102Q V115N I138K G172T",5
"lib2","SARS-CoV-2","TTGTTTTGATAATGCA",4,84.18,6,-4.84,2,3,1.13,0,">1 nonsynonymous","G146V G152S Y178L",3
"lib2","SARS-CoV-2","TTGTTTTGTAGATAGC",23,233.33,10.71,-0.13,0.05,2.89,1.09,0,"1 nonsynonymous","P7K",1
"lib2","SARS-CoV-2","TTGTTTTTAACTGTCT",1,26.06,6,-4.84,2,1.5,1.05,0,">1 nonsynonymous","K56M D98E R124S Q144R",4
"lib2","SARS-CoV-2","TTGTTTTTACACTTAC",5,39.08,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","K26W A89Y L162E",3
"lib2","SARS-CoV-2","TTGTTTTTCACAAGCA",7,0.89,NA,NA,NA,NA,NA,NA,"stop","I2N G9I D59V I80S E141T L162*",6
"lib2","SARS-CoV-2","TTGTTTTTCCATGGAC",14,384.97,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","W23P K114G I142Y V153T P177S",5
"lib2","SARS-CoV-2","TTGTTTTTTAGGTCCA",1,19.64,10.95,0.12,0.06,2.94,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTAAAAAAAGAGGTG",4,30.86,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","A14Y F167N",2
"lib2","SARS-CoV-2","TTTAAAAAATATTTAA",1,55.01,10.34,-0.49,0.03,2.94,1.04,0,"1 nonsynonymous","Y178S",1
"lib2","SARS-CoV-2","TTTAAAAACAAAAATA",10,98.36,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","C61A Q84D D97K N157F",4
"lib2","SARS-CoV-2","TTTAAAAACAACAATG",3,50.91,9.36,-1.47,0.08,1.72,1.1,0,">1 nonsynonymous","S36V D97T A105C L111Q",4
"lib2","SARS-CoV-2","TTTAAAAACGAATTGT",3,40.95,10.83,0,0.09,2.96,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTAAAAATAATAATA",1,5.28,7.2,-3.63,0.89,1.5,1.06,0.02,">1 nonsynonymous","V37R N64L A81S N92S N120S V153Q",6
"lib2","SARS-CoV-2","TTTAAAAATCTTTCGG",9,53.85,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C6T G117A D137E N157L",4
"lib2","SARS-CoV-2","TTTAAAACAAAATATA",9,6.27,NA,NA,NA,NA,NA,NA,"stop","S43T C61L N110S G117I F160P Q168W C195F T201*",8
"lib2","SARS-CoV-2","TTTAAAACAATGAATG",2,14.46,6,-4.84,2,3,1.14,0,"1 nonsynonymous","F126D",1
"lib2","SARS-CoV-2","TTTAAAACAATGTATC",10,140.37,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","N40I L95G I138P",3
"lib2","SARS-CoV-2","TTTAAAACCGCGGGCA",1,20.49,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","S29A L38N Y50M N64V F156P",5
"lib2","SARS-CoV-2","TTTAAAACTAACTAAA",8,40.71,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6S L60C V71K I88C N107L",5
"lib2","SARS-CoV-2","TTTAAAACTCAAAAGT",7,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31F S45L D68W V153T",4
"lib2","SARS-CoV-2","TTTAAAACTCTGCAAA",6,81.43,6.65,-4.18,0.24,1.5,1.11,0.01,"1 nonsynonymous","L131K",1
"lib2","SARS-CoV-2","TTTAAAATAAAAAACA",1,6.51,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","S29M S36W T100V V115C P149D G155V",6
"lib2","SARS-CoV-2","TTTAAAATAAAGGAGC",2,17.4,6,-4.84,2,1.5,1.24,0.06,">1 nonsynonymous","E10P C49G T55Y P82L K87N R127I",6
"lib2","SARS-CoV-2","TTTAAAATACTTGAGT",5,38.16,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","P82T I88D P149K",3
"lib2","SARS-CoV-2","TTTAAAATATGTAGTA",1,22.95,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F12G C31P F62C D98Y",4
"lib2","SARS-CoV-2","TTTAAAATATTAGTCC",1,14.76,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","C61I Q84M N120L S129H R136S L183D",6
"lib2","SARS-CoV-2","TTTAAAATGAAATCAC",4,93.3,8.14,-2.69,0.1,2.73,1.04,0,">1 nonsynonymous","K87Y Y175M V180I",3
"lib2","SARS-CoV-2","TTTAAAATGGCCTGCG",3,54.19,10.88,0.05,0.06,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTAAAATTTTGCCAT",4,33.89,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","N13I T63K P82T",3
"lib2","SARS-CoV-2","TTTAAACAAACAAGAT",4,98,10.74,-0.09,0.07,2.89,1.1,0,">1 nonsynonymous","K56D K198M",2
"lib2","SARS-CoV-2","TTTAAACATAGGTTAG",4,62.08,6.16,-4.67,0.73,1.5,1.15,0.02,">1 nonsynonymous","F8D P54L N107R A190V",4
"lib2","SARS-CoV-2","TTTAAACATGACCCGA",19,5.91,NA,NA,NA,NA,NA,NA,"stop","L38* D90L Y119S G152A",4
"lib2","SARS-CoV-2","TTTAAACATGTATTCA",1,40.95,10.28,-0.56,0.06,2.83,1.03,0,">1 nonsynonymous","L5D F62K P149L",3
"lib2","SARS-CoV-2","TTTAAACATTGCAACG",6,4.32,NA,NA,NA,NA,NA,NA,"stop","N13Y K56L K87* D97V",4
"lib2","SARS-CoV-2","TTTAAACATTGGGAAA",2,17.07,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","D59M A81Q F99A",3
"lib2","SARS-CoV-2","TTTAAACCAGGAATAA",16,198.33,10.76,-0.07,0.03,2.97,1.03,0,"1 nonsynonymous","T3W",1
"lib2","SARS-CoV-2","TTTAAACCATAGAAAA",7,39.49,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","S69W E76A A89N",3
"lib2","SARS-CoV-2","TTTAAACCTCAGCTTT",6,48.03,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","S43M C49L T140R G172D",4
"lib2","SARS-CoV-2","TTTAAACGATGCAGTG",1,3.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12E L38T N58L N64Y V77R",5
"lib2","SARS-CoV-2","TTTAAACGCGTTACGA",4,28.38,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","C49D Q84S",2
"lib2","SARS-CoV-2","TTTAAACTACAGTTCA",3,0.38,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y35N D68M K87S",3
"lib2","SARS-CoV-2","TTTAAACTGAGTCGCC",3,0,NA,NA,NA,NA,NA,NA,"stop","Y39* S41F G101A G155N",4
"lib2","SARS-CoV-2","TTTAAACTTAAAGAAC",19,261.77,10.39,-0.44,0.03,2.84,1.06,0,">1 nonsynonymous","W23F V37T P149H",3
"lib2","SARS-CoV-2","TTTAAAGAACTAAAAT",5,105.98,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P133S G172P",2
"lib2","SARS-CoV-2","TTTAAAGAACTCATGA",6,23.08,6,-4.84,2,1.5,1.26,0.03,">1 nonsynonymous","N13E G101C",2
"lib2","SARS-CoV-2","TTTAAAGAAGAGATAC",2,11.77,NA,NA,NA,NA,NA,0.35,">1 nonsynonymous","S19A A105D S200Y",3
"lib2","SARS-CoV-2","TTTAAAGACTAATGAA",10,112.21,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33S D68M P149R",3
"lib2","SARS-CoV-2","TTTAAAGACTAGAAAT",2,33.94,10.71,-0.13,0.1,2.88,1.01,0,"1 nonsynonymous","G83S",1
"lib2","SARS-CoV-2","TTTAAAGAGCCTCCAG",1,8.21,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","I2A Y119W R124L",3
"lib2","SARS-CoV-2","TTTAAAGATCCTTTAC",10,91.6,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60R G117L R127L",3
"lib2","SARS-CoV-2","TTTAAAGATTGCAGTG",3,23.04,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N13F L38S N92V R127V G146V",5
"lib2","SARS-CoV-2","TTTAAAGATTTCTATC",1,6.98,10.7,-0.14,0.16,2.83,1.15,0.01,">1 nonsynonymous","Q84E K128L",2
"lib2","SARS-CoV-2","TTTAAAGCAGTTTTAA",18,134.08,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","S45W A81L D97V I104L L122R",5
"lib2","SARS-CoV-2","TTTAAAGCCACTCGAG",8,0.17,NA,NA,NA,NA,NA,NA,"stop","F8K S41D D112S Y119* T201F",5
"lib2","SARS-CoV-2","TTTAAAGCCTTAGCTT",3,13.2,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","C6A P82S L95V V103L L122D T201L",6
"lib2","SARS-CoV-2","TTTAAAGCGGGATACC",3,19.2,10.79,-0.04,0.08,3,1.01,0.01,">1 nonsynonymous","S129Q T148F",2
"lib2","SARS-CoV-2","TTTAAAGGAATGATAG",2,17.02,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","F99R F156L",2
"lib2","SARS-CoV-2","TTTAAAGGTGACACTT",1,0,NA,NA,NA,NA,NA,NA,"stop","Y39*",1
"lib2","SARS-CoV-2","TTTAAATAAATACCGA",11,189.66,6.58,-4.25,0.3,1.5,1.14,0.01,">1 nonsynonymous","A22M D59P L125D G174R",4
"lib2","SARS-CoV-2","TTTAAATACAACAAGA",1,21.07,10.73,-0.1,0.07,3,1.01,0,"1 nonsynonymous","F160L",1
"lib2","SARS-CoV-2","TTTAAATACGATCAAA",6,1.45,NA,NA,NA,NA,NA,NA,"stop","K87T E154Y K198*",3
"lib2","SARS-CoV-2","TTTAAATAGGGCGCGG",4,77.07,10.48,-0.35,0.05,2.97,1.01,0,"1 nonsynonymous","F44T",1
"lib2","SARS-CoV-2","TTTAAATATGATCTAA",3,44.21,10.82,-0.02,0.08,2.82,1.19,0,"1 nonsynonymous","P149K",1
"lib2","SARS-CoV-2","TTTAAATCCATAAGAG",10,41.9,6.98,-3.86,0.6,1.5,1.36,0.07,">1 nonsynonymous","T3V Y91D K132L",3
"lib2","SARS-CoV-2","TTTAAATCTGTACAAA",5,97.58,8.26,-2.57,0.12,2.29,1.11,0.01,">1 nonsynonymous","I2R Q168C G174W",3
"lib2","SARS-CoV-2","TTTAAATGACTGCGAG",2,0.81,NA,NA,NA,NA,NA,NA,"stop","A14V C61H V71* P133A G155R V173L",6
"lib2","SARS-CoV-2","TTTAAATGGTTGGATT",4,24,6.2,-4.63,0.42,3,1.23,0.01,">1 nonsynonymous","L60M V77P G116T P191L",4
"lib2","SARS-CoV-2","TTTAAATGTAGTATTT",1,28.35,10.85,0.01,0.07,2.89,1.08,0,"1 nonsynonymous","R16V",1
"lib2","SARS-CoV-2","TTTAAATTATTTATCG",12,83.41,8.15,-2.69,0.17,1.5,1.09,0.01,">1 nonsynonymous","T3V Y121G",2
"lib2","SARS-CoV-2","TTTAACAAAATCAATC",8,54.95,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V20Y D90P P149T T170D",4
"lib2","SARS-CoV-2","TTTAACAAGGTACATT",2,11.48,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","P133S C158N",2
"lib2","SARS-CoV-2","TTTAACAAGTGCAAAA",7,190.68,9.4,-1.44,0.06,2.25,1.05,0,"1 nonsynonymous","P161C",1
"lib2","SARS-CoV-2","TTTAACAATCTATCGG",7,5.27,NA,NA,NA,NA,NA,NA,"stop","T3I T15* Q176A",3
"lib2","SARS-CoV-2","TTTAACAATGCAGATA",9,1.49,NA,NA,NA,NA,NA,NA,"stop","G9S K56V D98E D112V S129H A145* A192S",7
"lib2","SARS-CoV-2","TTTAACACAATGTTCT",3,58.55,9.74,-1.09,0.09,2.75,1.1,0,">1 nonsynonymous","C6P R78G",2
"lib2","SARS-CoV-2","TTTAACACCAAGGGCA",24,322.46,7.99,-2.84,0.11,2.42,1.06,0,">1 nonsynonymous","K87T S108N G166M",3
"lib2","SARS-CoV-2","TTTAACACTACTGAAA",7,138.9,9.95,-0.89,0.05,2.84,1.02,0,">1 nonsynonymous","L5C K87F P169N",3
"lib2","SARS-CoV-2","TTTAACACTATACATG",7,29.17,6,-4.84,2,1.5,1.2,0.05,">1 nonsynonymous","Q84C D90T W106A P191R",4
"lib2","SARS-CoV-2","TTTAACAGCACAATTT",7,129.58,10.3,-0.53,0.05,2.8,1.05,0,"1 nonsynonymous","F99Y",1
"lib2","SARS-CoV-2","TTTAACAGCCTGAGTA",1,9.8,8.09,-2.75,0.13,2.27,1,0,">1 nonsynonymous","D98M S113T K128G",3
"lib2","SARS-CoV-2","TTTAACAGGACAGTAT",4,27.36,9.53,-1.31,0.15,1.63,1.1,0.01,"1 nonsynonymous","C49S",1
"lib2","SARS-CoV-2","TTTAACAGGAGCATAG",4,84.64,9.57,-1.27,0.09,2.61,1.05,0,">1 nonsynonymous","L60F N107S K114E",3
"lib2","SARS-CoV-2","TTTAACAGTACTATGT",2,14.71,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6W F44L N92R",3
"lib2","SARS-CoV-2","TTTAACATAGTAATAT",1,19.9,10.18,-0.65,0.05,3,1.02,0,">1 nonsynonymous","N4K L5I E154H",3
"lib2","SARS-CoV-2","TTTAACATGAATTCTA",2,85.41,10.04,-0.8,0.03,2.93,1.09,0,"1 nonsynonymous","Y175H",1
"lib2","SARS-CoV-2","TTTAACATTTTAATCC",1,1.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S69G N130I",2
"lib2","SARS-CoV-2","TTTAACATTTTTTGTT",8,202.25,10.83,0,0.04,2.92,1.1,0,">1 nonsynonymous","G9D N110W",2
"lib2","SARS-CoV-2","TTTAACCACAACTTAG",7,58.64,6,-4.84,2,3,1.09,0,">1 nonsynonymous","I28T Y123T N157P",3
"lib2","SARS-CoV-2","TTTAACCACCAAATAA",1,28.82,9.8,-1.04,0.06,3,1,0,">1 nonsynonymous","R27T R73S",2
"lib2","SARS-CoV-2","TTTAACCATAAACGAT",11,3.76,NA,NA,NA,NA,NA,NA,"stop","K56T A67L L95V Y119*",4
"lib2","SARS-CoV-2","TTTAACCCAGCCGTAT",2,73.21,6.68,-4.15,0.33,1.5,1.16,0.02,">1 nonsynonymous","V32K A42L D112V E141M",4
"lib2","SARS-CoV-2","TTTAACCCCATACAAT",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P7Y",1
"lib2","SARS-CoV-2","TTTAACCGGATATTTG",2,20.17,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTTAACCGTATGCAGC",1,2.84,NA,NA,NA,NA,NA,NA,"stop","Y39* S43D",2
"lib2","SARS-CoV-2","TTTAACCTATCGTGAA",4,4.95,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","T55N",1
"lib2","SARS-CoV-2","TTTAACCTCGAGGGAC",2,27.75,10.95,0.12,0.08,3,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTAACCTTAAATGAA",1,0.08,NA,NA,NA,NA,NA,NA,"stop","N110S T201*",2
"lib2","SARS-CoV-2","TTTAACGAATAGTATA",3,148.05,10.23,-0.61,0.03,2.9,1.01,0,"1 nonsynonymous","A33R",1
"lib2","SARS-CoV-2","TTTAACGACAATGTAA",2,28.32,10.74,-0.09,0.05,2.97,1.03,0,">1 nonsynonymous","D98W I104F",2
"lib2","SARS-CoV-2","TTTAACGATAAAATGT",5,20.37,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","S41V V103D T201R",3
"lib2","SARS-CoV-2","TTTAACGCATGAACGG",3,80.51,6,-4.84,1.11,1.5,1.14,0.01,">1 nonsynonymous","A14R K94S K128R F156G",4
"lib2","SARS-CoV-2","TTTAACGCCAAGCCCA",3,79.21,10.86,0.02,0.04,2.98,1.05,0,"1 nonsynonymous","T148I",1
"lib2","SARS-CoV-2","TTTAACGCCGAACAAC",5,61.71,6,-4.84,2,1.5,1.26,0.04,">1 nonsynonymous","K56P Y91D",2
"lib2","SARS-CoV-2","TTTAACGCGATCCCCT",9,80.42,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C31T S45D N64Y A105S P149E P161W",6
"lib2","SARS-CoV-2","TTTAACGGGCCAGAAC",18,251.25,8.71,-2.13,0.05,1.74,1.1,0,">1 nonsynonymous","D97A N120W Q144L",3
"lib2","SARS-CoV-2","TTTAACGTGTTTTCGA",9,56.59,6.19,-4.65,0.77,1.5,1.2,0.02,">1 nonsynonymous","T15F R127V",2
"lib2","SARS-CoV-2","TTTAACTACTCACATC",16,1551.58,10.5,-0.34,0.02,2.97,1.02,0,">1 nonsynonymous","N64M K114T F160S",3
"lib2","SARS-CoV-2","TTTAACTAGCCCTCGA",5,35.97,6,-4.84,1.49,1.5,1.1,0.01,">1 nonsynonymous","A33V D68K E141M",3
"lib2","SARS-CoV-2","TTTAACTATAGTTATA",2,60.34,9.45,-1.39,0.12,1.63,1.03,0.01,">1 nonsynonymous","L38F S41P K94S",3
"lib2","SARS-CoV-2","TTTAACTATTATATGA",5,45.17,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L95G K114Q P149Q",3
"lib2","SARS-CoV-2","TTTAACTCATACAAGA",3,30.5,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","L38Q Q84W N92Q K114A",4
"lib2","SARS-CoV-2","TTTAACTCCAAAGCGT",2,12.02,10.98,0.14,0.12,2.95,1.05,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","TTTAACTGCGATATGA",4,56.42,9.81,-1.02,0.06,2.29,1.03,0,">1 nonsynonymous","N64L Y91K S200L",3
"lib2","SARS-CoV-2","TTTAACTTTATCTCAG",1,5.72,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37M F62K D98V",3
"lib2","SARS-CoV-2","TTTAAGAAAGGCGGAT",14,136.7,6,-4.84,2,1.5,1.19,0.01,"1 nonsynonymous","P161Y",1
"lib2","SARS-CoV-2","TTTAAGAAATAACCAG",8,53.22,6,-4.84,2,3,1.16,0,">1 nonsynonymous","I2R F62N V71M G83F P161S",5
"lib2","SARS-CoV-2","TTTAAGAAGATATTAC",3,3.34,NA,NA,NA,NA,NA,NA,"stop","F12Y Y93* R136K",3
"lib2","SARS-CoV-2","TTTAAGAAGCAAAATA",1,0,NA,NA,NA,NA,NA,NA,"stop","T3* K56T K87L L95Q P133L",5
"lib2","SARS-CoV-2","TTTAAGAATAATCGAT",1,3.52,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37E L60K",2
"lib2","SARS-CoV-2","TTTAAGACAGAACATG",2,16.4,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","R25N S45Q P54G W106T",4
"lib2","SARS-CoV-2","TTTAAGACGAAATACC",20,180.06,9.99,-0.84,0.04,2.43,1.04,0,">1 nonsynonymous","T85W G152F",2
"lib2","SARS-CoV-2","TTTAAGACTAACCGTG",2,92.02,10.84,0,0.04,2.94,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTAAGAGCAATAATA",2,26.93,10.04,-0.8,0.06,2.92,1.1,0,"1 nonsynonymous","N118Y",1
"lib2","SARS-CoV-2","TTTAAGATATCAAGTA",1,0,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TTTAAGATCGAGGATA",9,231.64,10.09,-0.75,0.05,2.6,1.05,0,">1 nonsynonymous","N58T D97F F160C",3
"lib2","SARS-CoV-2","TTTAAGATTCACCGGT",2,13.22,6,-4.84,2,3,1.14,0.03,">1 nonsynonymous","L5R P82R S164I F185R",4
"lib2","SARS-CoV-2","TTTAAGATTCATCGAA",1,24.24,6.35,-4.48,0.54,1.5,1.13,0.02,">1 nonsynonymous","L60S V77N L122I",3
"lib2","SARS-CoV-2","TTTAAGATTCCTACAA",1,7.99,6,-4.84,2,3,1.21,0.01,">1 nonsynonymous","D98L R124W",2
"lib2","SARS-CoV-2","TTTAAGATTTTGTAGT",4,34.87,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","Y39S L95C G101C F156M",4
"lib2","SARS-CoV-2","TTTAAGCAAGACAATA",1,14.04,10.52,-0.32,0.17,2.57,1,0.01,">1 nonsynonymous","A14K A81T",2
"lib2","SARS-CoV-2","TTTAAGCAAGGCCTTT",2,36.28,6,-4.84,2,1.5,1.15,0.04,">1 nonsynonymous","S45T G86L F160I",3
"lib2","SARS-CoV-2","TTTAAGCACTATTAAG",4,0.42,NA,NA,NA,NA,NA,NA,"stop","N64C K87* D97G R179M",4
"lib2","SARS-CoV-2","TTTAAGCATTAACTCT",8,114.52,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","F12Q V37I A89S N109Y Y175L",5
"lib2","SARS-CoV-2","TTTAAGCCACATACAT",11,98.04,6,-4.84,2,3,1.16,0,">1 nonsynonymous","K94F N107L F160D",3
"lib2","SARS-CoV-2","TTTAAGCCCAGATAAT",6,59.57,9.88,-0.96,0.07,2.1,1.08,0,"1 nonsynonymous","F99I",1
"lib2","SARS-CoV-2","TTTAAGCCGAACATAT",3,26.79,7.73,-3.11,0.25,1.5,1.16,0.02,">1 nonsynonymous","V11I A89F K132M G155W S164R",5
"lib2","SARS-CoV-2","TTTAAGCCGTTTAAAG",1,45.19,9.21,-1.63,0.13,1.5,1.06,0.01,">1 nonsynonymous","A14H L38S",2
"lib2","SARS-CoV-2","TTTAAGCGAGAAAATA",2,20.42,9.96,-0.87,0.11,2.54,1.09,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTTAAGCTAGAAATAG",2,93.5,9.77,-1.06,0.07,2.42,1.05,0,">1 nonsynonymous","F62K F134S",2
"lib2","SARS-CoV-2","TTTAAGGAAAACTCCA",4,42.65,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","C61S I80F W106S N118V S139L V173T V180S",7
"lib2","SARS-CoV-2","TTTAAGGACCCATTAT",1,8.33,10.33,-0.51,0.12,2.9,1.04,0.01,">1 nonsynonymous","Y123L E186S",2
"lib2","SARS-CoV-2","TTTAAGGTAGTACTCA",5,17.68,7.9,-2.93,0.38,1.5,1.06,0.07,">1 nonsynonymous","L95F P133K",2
"lib2","SARS-CoV-2","TTTAAGGTCTTTGGCC",5,76.12,10.48,-0.35,0.05,2.98,1.04,0,">1 nonsynonymous","C61E V173G",2
"lib2","SARS-CoV-2","TTTAAGTAAAAACAGA",1,4.61,NA,NA,NA,NA,NA,NA,"synonymous","",0
"lib2","SARS-CoV-2","TTTAAGTAAGACTTTG",1,4.84,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y39V P54C L125A Y175R",4
"lib2","SARS-CoV-2","TTTAAGTACCACGTCA",8,4,NA,NA,NA,NA,NA,NA,"stop","R25* G86C Y119G",3
"lib2","SARS-CoV-2","TTTAAGTATGGCTGAA",1,0.52,NA,NA,NA,NA,NA,NA,"stop","A14* A105I G174S T201L",4
"lib2","SARS-CoV-2","TTTAAGTCATAAAAGC",3,74.42,9.19,-1.64,0.05,2.96,1.06,0,"1 nonsynonymous","F156E",1
"lib2","SARS-CoV-2","TTTAAGTCTTCACGTA",1,14.35,10.63,-0.21,0.1,2.8,1.17,0,"1 nonsynonymous","S53Y",1
"lib2","SARS-CoV-2","TTTAAGTGGGCAACCA",4,86.53,6,-4.84,1.6,3,1.15,0,">1 nonsynonymous","R27L V77A K87L Y175W R179G",5
"lib2","SARS-CoV-2","TTTAATAAACGCACGC",5,116.88,10.65,-0.19,0.03,2.93,1.06,0,">1 nonsynonymous","G9R K26Q",2
"lib2","SARS-CoV-2","TTTAATAAACTGGTCT",13,130.57,9.73,-1.11,0.06,2.04,1.1,0,">1 nonsynonymous","S43A K48G D97I",3
"lib2","SARS-CoV-2","TTTAATAACAGTTTAG",3,13.31,6,-4.84,2,3,1.18,0.01,">1 nonsynonymous","F12K V181G",2
"lib2","SARS-CoV-2","TTTAATAACATGTAGA",4,93.98,6,-4.84,2,1.5,1.12,0,">1 nonsynonymous","G86F D97E D112E N130C",4
"lib2","SARS-CoV-2","TTTAATAACCAAGCAA",6,82.34,8.75,-2.09,0.06,3,1.08,0,">1 nonsynonymous","Y159L T201V",2
"lib2","SARS-CoV-2","TTTAATAAGACGCAAT",7,54.96,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I72Y S129W",2
"lib2","SARS-CoV-2","TTTAATAATCCAATTA",12,82.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","C6R I28H S36H N107S",4
"lib2","SARS-CoV-2","TTTAATAATCTCCACG",2,0.08,NA,NA,NA,NA,NA,NA,"stop","P7V A33* P149M A190V",4
"lib2","SARS-CoV-2","TTTAATAATGCGAGTC",13,162.14,8.42,-2.42,0.11,2.55,1.04,0,">1 nonsynonymous","L57D A145M F156M",3
"lib2","SARS-CoV-2","TTTAATAATTAAATGA",7,65.1,6,-4.84,1.46,1.5,1.12,0,">1 nonsynonymous","S41W F70T I138V",3
"lib2","SARS-CoV-2","TTTAATAATTGTCAAG",11,116.18,9.08,-1.75,0.06,2.9,1.09,0,"1 nonsynonymous","N157A",1
"lib2","SARS-CoV-2","TTTAATACAAACTTCG",8,0.58,NA,NA,NA,NA,NA,NA,"stop","S36W C49V L57N I104*",4
"lib2","SARS-CoV-2","TTTAATACATCCAGCA",12,128.84,10.77,-0.07,0.03,2.96,1.04,0,"1 nonsynonymous","N58S",1
"lib2","SARS-CoV-2","TTTAATACGATGTGGG",2,0.61,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib2","SARS-CoV-2","TTTAATACGCGCGGGA",6,76.23,6,-4.84,2,1.5,1.1,0,">1 nonsynonymous","I72G Y159N",2
"lib2","SARS-CoV-2","TTTAATAGAACACGTT",6,126.68,9.64,-1.2,0.05,2.82,1.03,0,">1 nonsynonymous","N40S K56N Y119K",3
"lib2","SARS-CoV-2","TTTAATAGCGCTCTTA",8,40.8,10.6,-0.24,0.03,2.95,1.04,0,">1 nonsynonymous","K56L D97F L125M",3
"lib2","SARS-CoV-2","TTTAATAGGAATGCAT",1,0,NA,NA,NA,NA,NA,NA,"stop","C49R A105V N157S F160*",4
"lib2","SARS-CoV-2","TTTAATATCCGCTAAC",2,49.5,10.28,-0.55,0.03,2.92,1.02,0,"1 nonsynonymous","F8V",1
"lib2","SARS-CoV-2","TTTAATATCGTTAAGC",5,58.46,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","A33P I88R V115Y",3
"lib2","SARS-CoV-2","TTTAATATTTAGATAC",5,7.83,8.82,-2.01,0.17,1.5,1,0.02,">1 nonsynonymous","T55F Y91R T140I P149Q",4
"lib2","SARS-CoV-2","TTTAATCACCAAGCCC",7,74.45,6.07,-4.77,0.67,1.5,1.12,0.01,">1 nonsynonymous","Y35S S69T N157C",3
"lib2","SARS-CoV-2","TTTAATCAGATACCAA",4,10.45,NA,NA,NA,NA,NA,NA,"stop","P82L N92I E135* G155L",4
"lib2","SARS-CoV-2","TTTAATCCAGTCTGAG",3,98.44,9.01,-1.83,0.14,1.5,1.08,0.01,">1 nonsynonymous","S36M P96V",2
"lib2","SARS-CoV-2","TTTAATCCTATTAGGA",11,104.61,8.63,-2.21,0.09,2.93,1.1,0,">1 nonsynonymous","N1K N157L",2
"lib2","SARS-CoV-2","TTTAATCCTTAAGCTT",2,18.83,10.8,-0.03,0.04,3,1.02,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","TTTAATCGATATGGCT",8,8.85,NA,NA,NA,NA,NA,NA,"stop","T15M S36G G83C Y121* R127G",5
"lib2","SARS-CoV-2","TTTAATCTTAGCCCAC",11,1.04,NA,NA,NA,NA,NA,NA,"stop","Y50S D59R G172*",3
"lib2","SARS-CoV-2","TTTAATCTTCAAACAT",4,20.34,10.29,-0.55,0.08,2.89,1.03,0,">1 nonsynonymous","F44M L122W G196E",3
"lib2","SARS-CoV-2","TTTAATGAGTAATACT",1,26.7,10.7,-0.13,0.06,2.85,1.14,0,"1 nonsynonymous","I28V",1
"lib2","SARS-CoV-2","TTTAATGATCGCCTTG",3,21.5,10.69,-0.14,0.05,2.74,1.27,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTAATGCTCAGAAAG",1,20.43,10.77,-0.06,0.07,2.83,1.15,0,"1 nonsynonymous","S129V",1
"lib2","SARS-CoV-2","TTTAATGGCTCACAAA",1,43.16,8.33,-2.51,0.13,2.5,1.02,0.01,">1 nonsynonymous","K56R Y119C F134R",3
"lib2","SARS-CoV-2","TTTAATTACATTATAT",3,48.72,10.54,-0.29,0.07,2.93,1.05,0,">1 nonsynonymous","Q84L E154K",2
"lib2","SARS-CoV-2","TTTAATTACTTAAGGA",9,125.77,9.9,-0.93,0.06,2.45,1.02,0,">1 nonsynonymous","A18L V173H",2
"lib2","SARS-CoV-2","TTTAATTATAAAGCTA",1,21.49,10.87,0.03,0.07,2.83,1.19,0,">1 nonsynonymous","A33W T55H E141A",3
"lib2","SARS-CoV-2","TTTAATTATAAATGAG",1,1.25,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N64Q A81L N120M V173S",4
"lib2","SARS-CoV-2","TTTAATTCGATGGTTA",3,54.19,10.67,-0.17,0.03,2.99,1.02,0,"1 nonsynonymous","L131M",1
"lib2","SARS-CoV-2","TTTAATTCTGTAAACA",12,81.48,9.09,-1.75,0.06,1.78,1.12,0,">1 nonsynonymous","F70Y E141G",2
"lib2","SARS-CoV-2","TTTAATTGTGACCTAA",7,152.38,10.84,0.01,0.05,2.9,1.09,0,"1 nonsynonymous","T55G",1
"lib2","SARS-CoV-2","TTTACAAAAAAAAGGA",2,0,NA,NA,NA,NA,NA,NA,"stop","C102R C150*",2
"lib2","SARS-CoV-2","TTTACAAAAACAAGAG",6,90.9,10.93,0.1,0.06,2.99,1.04,0,"1 nonsynonymous","T55Q",1
"lib2","SARS-CoV-2","TTTACAAAACTCTTTC",7,103.31,9.72,-1.12,0.05,2.32,1.04,0,">1 nonsynonymous","P133C F160V",2
"lib2","SARS-CoV-2","TTTACAAAATCAATCT",21,2.41,NA,NA,NA,NA,NA,NA,"stop","T15V K26* D90E C158Q T201D",5
"lib2","SARS-CoV-2","TTTACAAACGGATTAA",2,45.78,10.59,-0.24,0.05,2.98,1.05,0,">1 nonsynonymous","C61A K132F",2
"lib2","SARS-CoV-2","TTTACAAAGTGCATTC",1,30.52,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","V11W C61F G86R S164Y",4
"lib2","SARS-CoV-2","TTTACAAATACTATAT",14,228.48,10.8,-0.03,0.05,2.94,1.07,0,"1 nonsynonymous","K198V",1
"lib2","SARS-CoV-2","TTTACAAATACTGAGT",6,41.49,9.4,-1.44,0.09,1.93,1.06,0,">1 nonsynonymous","T15D Y35L A89R",3
"lib2","SARS-CoV-2","TTTACAACAAAGAATC",14,59.23,6,-4.84,2,1.5,1.39,0.04,">1 nonsynonymous","C6N T85L S139V P149N G155R",5
"lib2","SARS-CoV-2","TTTACAACCTAGTGGA",9,56.21,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T55S G101S",2
"lib2","SARS-CoV-2","TTTACAACGGCAGATG",11,182.01,8.41,-2.43,0.11,2.04,1.15,0,">1 nonsynonymous","I2W N107L",2
"lib2","SARS-CoV-2","TTTACAAGCATATAAC",3,0.16,NA,NA,NA,NA,NA,NA,"stop","L60F K94D A105*",3
"lib2","SARS-CoV-2","TTTACAAGCCGTGAAG",4,16.68,10.74,-0.09,0.06,2.88,1.12,0,">1 nonsynonymous","C61I V153F",2
"lib2","SARS-CoV-2","TTTACAAGGCGTCAAA",4,133.7,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y35K K56R V103C P149V N157T",5
"lib2","SARS-CoV-2","TTTACAATATTCTATG",3,11.71,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6L S41T C102H",3
"lib2","SARS-CoV-2","TTTACAATGATTGTGT",10,48,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","N92V Y121M",2
"lib2","SARS-CoV-2","TTTACAATTCACTCGA",7,112.28,6,-4.84,2,3,1.09,0,">1 nonsynonymous","F8G Y39D D97R A105V G116T R136D",6
"lib2","SARS-CoV-2","TTTACACAGGGCCAAA",1,96.99,6,-4.84,1.36,1.5,1.11,0.01,">1 nonsynonymous","N40V L60S A105L L122S",4
"lib2","SARS-CoV-2","TTTACACAGTCTTAAT",12,77.93,6,-4.84,2,3,1.15,0,">1 nonsynonymous","F44T V71C C102Q",3
"lib2","SARS-CoV-2","TTTACACCGAAAAACC",11,759.18,9.1,-1.73,0.05,2.51,1.08,0,"1 nonsynonymous","Q176R",1
"lib2","SARS-CoV-2","TTTACACCGTCAAAAA",8,153.01,10.72,-0.12,0.04,2.89,1.14,0,">1 nonsynonymous","S43K N151M",2
"lib2","SARS-CoV-2","TTTACACCTCAGTCAT",4,35.03,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N92V T100R",2
"lib2","SARS-CoV-2","TTTACACCTCTGTGAA",2,6.08,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F17S I104L L183I",3
"lib2","SARS-CoV-2","TTTACACGTATTGAAC",2,1.19,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","G9F S41M",2
"lib2","SARS-CoV-2","TTTACACGTTTCGATG",2,110.48,10.29,-0.54,0.04,2.82,1.07,0,">1 nonsynonymous","N13Q T148A L188I",3
"lib2","SARS-CoV-2","TTTACACTAGCCCGGC",13,133.26,9.83,-1.01,0.04,1.98,1.04,0,">1 nonsynonymous","F12S S43K",2
"lib2","SARS-CoV-2","TTTACACTCGATTGTA",5,84.5,9.92,-0.92,0.04,2.99,1.02,0,">1 nonsynonymous","D90M G166S",2
"lib2","SARS-CoV-2","TTTACACTCTAATAGC",19,4.41,NA,NA,NA,NA,NA,NA,"stop","F70G K94* N107W P133*",4
"lib2","SARS-CoV-2","TTTACACTCTTAAGAA",7,51.99,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","V37L C49S S139D N157F",4
"lib2","SARS-CoV-2","TTTACAGAGATAGAAC",1,44.98,10.73,-0.1,0.07,2.89,1.1,0,"1 nonsynonymous","S200P",1
"lib2","SARS-CoV-2","TTTACAGAGCTTAGCC",4,22.94,10.7,-0.14,0.14,2.9,1,0,"1 nonsynonymous","K128I",1
"lib2","SARS-CoV-2","TTTACAGAGTCTTGAA",6,0.24,NA,NA,NA,NA,NA,NA,"stop","A14S S41R F62S S69* N92W T100H N120G Q168V",8
"lib2","SARS-CoV-2","TTTACAGATTCCTATA",6,17.42,6.35,-4.49,0.44,2.77,1.19,0.01,">1 nonsynonymous","T15R S19Y S53P D98F K128L F167Q",6
"lib2","SARS-CoV-2","TTTACAGCGACCCGTA",4,105.35,10.57,-0.26,0.04,2.96,1.04,0,">1 nonsynonymous","K87Y D98I",2
"lib2","SARS-CoV-2","TTTACAGTAGAATACG",4,0.65,NA,NA,NA,NA,NA,NA,"stop","G9* A18C T55N Y121R",4
"lib2","SARS-CoV-2","TTTACATACCACACCC",5,34.62,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","C61E G83I A89C F99L",4
"lib2","SARS-CoV-2","TTTACATATCAATCAG",10,157.55,6,-4.84,1.06,1.5,1.14,0.01,">1 nonsynonymous","F12L L38D A89T C102T V103L E141P C150R",7
"lib2","SARS-CoV-2","TTTACATATCACTAAT",6,79.63,10.66,-0.17,0.04,2.92,1.06,0,">1 nonsynonymous","K26M A145S V153I",3
"lib2","SARS-CoV-2","TTTACATCATAGCCTT",9,132.4,10.62,-0.21,0.04,2.95,1.04,0,">1 nonsynonymous","L5D T63K G174A",3
"lib2","SARS-CoV-2","TTTACATCCTAACAAT",4,24.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A14C S19I S45W Y50Q D68L L95K",6
"lib2","SARS-CoV-2","TTTACATGAATAAACC",3,15.4,6,-4.84,2,3,1.15,0.01,">1 nonsynonymous","N92E T100N C158I E186S",4
"lib2","SARS-CoV-2","TTTACATGTATCAACA",3,83.51,6.15,-4.69,0.93,1.5,1.15,0.03,">1 nonsynonymous","A81I G86N A89S S164K P177F",5
"lib2","SARS-CoV-2","TTTACATTATAGCTGA",3,111.95,10.26,-0.58,0.04,2.84,1.03,0,"1 nonsynonymous","Q176M",1
"lib2","SARS-CoV-2","TTTACATTGAGTTTTT",7,62.99,10.74,-0.09,0.07,2.95,1,0,">1 nonsynonymous","V153L G196N",2
"lib2","SARS-CoV-2","TTTACATTTTATCCCA",4,0.35,NA,NA,NA,NA,NA,NA,"stop","V37* A42R",2
"lib2","SARS-CoV-2","TTTACCAAACGTCTCG",1,12.6,8.84,-2,0.23,2.36,1.25,0.02,">1 nonsynonymous","A42K S113T T140A P149Y",4
"lib2","SARS-CoV-2","TTTACCAAATCGAATA",1,21.24,6,-4.84,2,1.5,1.17,0.03,">1 nonsynonymous","L38M D59L D112F P169K",4
"lib2","SARS-CoV-2","TTTACCAACAACGAAC",3,2.14,NA,NA,NA,NA,NA,NA,"stop","N107C S139C F167*",3
"lib2","SARS-CoV-2","TTTACCAACAATAACT",2,8.48,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","G74L Q176Y",2
"lib2","SARS-CoV-2","TTTACCAACAGAACAC",5,1.69,NA,NA,NA,NA,NA,NA,"stop","F44* D98A N151F G172S",4
"lib2","SARS-CoV-2","TTTACCAACAGACTGC",11,133.8,10.83,0,0.04,2.96,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTACCAACATTAAAC",5,6.45,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V103A C150L",2
"lib2","SARS-CoV-2","TTTACCAATCATAGTG",1,29.08,9.32,-1.52,0.09,2.99,1.04,0,"1 nonsynonymous","G146R",1
"lib2","SARS-CoV-2","TTTACCAATTTAACGA",7,87.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20E Q84D Y143A Q176W L183R",5
"lib2","SARS-CoV-2","TTTACCACTAACAAAA",4,21.87,8.82,-2.02,0.18,1.5,1.1,0.02,">1 nonsynonymous","G9Y V103T E141M",3
"lib2","SARS-CoV-2","TTTACCACTACACTAT",10,125.07,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R16N G86F Y143L",3
"lib2","SARS-CoV-2","TTTACCACTGTGAAAT",11,150.86,10.81,-0.03,0.04,2.91,1.11,0,"1 nonsynonymous","Q84G",1
"lib2","SARS-CoV-2","TTTACCCAACTCACGA",14,32.97,6,-4.84,2,3,1.21,0,">1 nonsynonymous","V103R S139P",2
"lib2","SARS-CoV-2","TTTACCCACACGGATA",4,41.78,10.81,-0.03,0.06,3,1.04,0,"1 nonsynonymous","S43E",1
"lib2","SARS-CoV-2","TTTACCCAGCGTGAAC",7,22.22,6,-4.84,2,3,1.4,0.02,">1 nonsynonymous","T15R P96R Y178D",3
"lib2","SARS-CoV-2","TTTACCCAGTGCCGAC",4,41.05,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y119W S139R C158S",3
"lib2","SARS-CoV-2","TTTACCCCACTCGTAT",2,11.48,6,-4.84,2,1.5,1.4,0.06,">1 nonsynonymous","D90L W106C Y121L V153N",4
"lib2","SARS-CoV-2","TTTACCCCCAGCTAGT",6,0.64,NA,NA,NA,NA,NA,NA,"stop","I2S C61F G86R T100* L131* P149S",6
"lib2","SARS-CoV-2","TTTACCCGATGCGCTA",8,32.28,8.19,-2.65,0.4,1.5,1.03,0.06,"1 nonsynonymous","I72S",1
"lib2","SARS-CoV-2","TTTACCCTACCAATGT",24,123.82,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","R127S C158W",2
"lib2","SARS-CoV-2","TTTACCGCCAAGGCCG",5,64.23,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","A105P K128C",2
"lib2","SARS-CoV-2","TTTACCGCGACCTAGG",4,16.35,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","L5Q K56N F99L N107F R179G T201E",6
"lib2","SARS-CoV-2","TTTACCGCGTACAGTA",4,39.57,9.02,-1.82,0.13,1.61,1.1,0.01,"1 nonsynonymous","V77W",1
"lib2","SARS-CoV-2","TTTACCGCTCCTCATT",2,8.54,9.91,-0.93,0.26,1.5,1.16,0.04,">1 nonsynonymous","A18R T85M D90F N120Y E154V N171F",6
"lib2","SARS-CoV-2","TTTACCGTCAACGTTA",6,85.57,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S19R Y35T V65G N120T R179K",5
"lib2","SARS-CoV-2","TTTACCTAAAAATCTG",2,22.99,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","E10Y D98A L125C Q168I L188R",5
"lib2","SARS-CoV-2","TTTACCTACTACGCGT",2,0.67,NA,NA,NA,NA,NA,NA,"stop","Y143* N157T V173S",3
"lib2","SARS-CoV-2","TTTACCTTACGCACAT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G P82T",2
"lib2","SARS-CoV-2","TTTACCTTCAACATTG",20,179.66,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","T100E C158W",2
"lib2","SARS-CoV-2","TTTACCTTCGTCAAGC",2,8.93,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","C49K",1
"lib2","SARS-CoV-2","TTTACGAATAGACGTT",4,1.47,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15Y A33S A192H",3
"lib2","SARS-CoV-2","TTTACGAATTCTCTCG",2,23.93,6,-4.84,2,3,1.17,0,">1 nonsynonymous","P82S K94L F99W",3
"lib2","SARS-CoV-2","TTTACGATAAAAAATT",19,126.9,6.32,-4.52,0.21,1.82,1.11,0,">1 nonsynonymous","T46A L60R A89W Y143M T170N",5
"lib2","SARS-CoV-2","TTTACGATCCTATGAG",6,86.42,10.38,-0.46,0.04,2.91,1.07,0,"1 nonsynonymous","A14M",1
"lib2","SARS-CoV-2","TTTACGATGACAGCCA",9,202.83,7.72,-3.11,0.1,1.62,1.12,0,">1 nonsynonymous","E10V Y39N N157T",3
"lib2","SARS-CoV-2","TTTACGATGTCAGTAA",4,55.98,10.88,0.04,0.04,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTACGATTGGTCGGA",2,31.77,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G101R Q163T",2
"lib2","SARS-CoV-2","TTTACGATTTACGTAC",1,14.22,10.77,-0.06,0.08,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTACGCACCGGCACG",15,27.42,6.11,-4.73,1.03,1.5,1.09,0.03,"1 nonsynonymous","V103R",1
"lib2","SARS-CoV-2","TTTACGCACTGTTTCC",5,102.29,10.82,-0.02,0.03,2.99,1.03,0,"1 nonsynonymous","S45T",1
"lib2","SARS-CoV-2","TTTACGCGCGTGAACA",4,92.78,10.71,-0.12,0.05,2.93,1.06,0,"1 nonsynonymous","D98Q",1
"lib2","SARS-CoV-2","TTTACGCGTTGGCAGC",9,52.51,6,-4.84,2,3,1.16,0,">1 nonsynonymous","C61M Y91S V181T",3
"lib2","SARS-CoV-2","TTTACGCTAATAAACC",9,182.02,10.56,-0.28,0.04,2.96,1.03,0,"1 nonsynonymous","I142F",1
"lib2","SARS-CoV-2","TTTACGGACGGGGGCC",4,22.87,10.57,-0.27,0.05,2.88,1.14,0,">1 nonsynonymous","I2S F160I",2
"lib2","SARS-CoV-2","TTTACGGAGTGTGGGC",2,0,NA,NA,NA,NA,NA,NA,"stop","V37* A145G G152M",3
"lib2","SARS-CoV-2","TTTACGGCATGACAGC",12,115.83,6,-4.84,2,1.5,1.21,0.05,">1 nonsynonymous","F12A A18E S45M D98K Y165S",5
"lib2","SARS-CoV-2","TTTACGGCGAAGCCTA",6,50.26,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N107I F134V",2
"lib2","SARS-CoV-2","TTTACGGTACTCTAAG",1,30.26,10.83,0,0.03,3,1.01,0,"1 nonsynonymous","Q163L",1
"lib2","SARS-CoV-2","TTTACGGTATCTTCCC",4,38.85,6,-4.84,2,3,1.11,0,">1 nonsynonymous","C61I D112L Y143V",3
"lib2","SARS-CoV-2","TTTACGGTCTAAAGCT",13,219.62,7.99,-2.85,0.11,1.61,1.11,0,">1 nonsynonymous","Q168L V173S",2
"lib2","SARS-CoV-2","TTTACGTAAAGTCCAA",3,0,NA,NA,NA,NA,NA,NA,"stop","N171P Y178* A190N",3
"lib2","SARS-CoV-2","TTTACGTAATGTTTGC",1,9.42,6,-4.84,2,3,1.33,0.02,">1 nonsynonymous","N30L D112R",2
"lib2","SARS-CoV-2","TTTACGTACCGAAGTT",1,381.24,9.81,-1.03,0.01,2.93,1.04,0,">1 nonsynonymous","T85M L122S E154V P169N",4
"lib2","SARS-CoV-2","TTTACGTACTGTGCAT",2,19.32,10.64,-0.2,0.05,2.94,1.07,0,">1 nonsynonymous","N30R K198D",2
"lib2","SARS-CoV-2","TTTACGTCATAAAGGT",5,46.97,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","G83F Y91D N107A Y119N E141N",5
"lib2","SARS-CoV-2","TTTACGTCCAAATACA",1,2.93,NA,NA,NA,NA,NA,NA,"stop","V37L Y119V Y143* P149N",4
"lib2","SARS-CoV-2","TTTACGTGAATTTCGT",4,55.4,10.78,-0.05,0.04,2.96,1.06,0,">1 nonsynonymous","P7T Y39Q I104M",3
"lib2","SARS-CoV-2","TTTACGTGCAATCGAC",6,170.7,9.5,-1.34,0.03,2.89,1.1,0,">1 nonsynonymous","K56A N107P L125S",3
"lib2","SARS-CoV-2","TTTACTAAAAAGCCCA",3,21.02,9.39,-1.45,0.15,1.98,1.02,0.01,">1 nonsynonymous","C61A V77F",2
"lib2","SARS-CoV-2","TTTACTAACACTAACG",10,158.87,10.25,-0.58,0.03,2.96,1.03,0,">1 nonsynonymous","Y35I S41N P54G G83N N110D N171S",6
"lib2","SARS-CoV-2","TTTACTAACTTAAAAC",2,16.01,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P96N T148F N157Y S200R",4
"lib2","SARS-CoV-2","TTTACTACGAAATGCA",9,176.51,10.17,-0.66,0.03,2.87,1.03,0,">1 nonsynonymous","P7H Y123C",2
"lib2","SARS-CoV-2","TTTACTACTTAATGCA",2,52.35,9.95,-0.88,0.14,2.58,1.09,0.01,">1 nonsynonymous","S36L L57F",2
"lib2","SARS-CoV-2","TTTACTATCCAGACGT",9,47.85,6,-4.84,1.25,1.5,1.14,0.02,">1 nonsynonymous","A33P Y50P C61M",3
"lib2","SARS-CoV-2","TTTACTATCTAGCCCC",7,81.94,10.8,-0.03,0.08,2.86,1.14,0,">1 nonsynonymous","N24T D97S",2
"lib2","SARS-CoV-2","TTTACTCACTGATGTG",11,33.8,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","S43G F62R P96L",3
"lib2","SARS-CoV-2","TTTACTCAGAGAAGTT",6,58.6,7.99,-2.85,0.11,1.84,1.08,0,">1 nonsynonymous","P7A T55V T100K T170I",4
"lib2","SARS-CoV-2","TTTACTCAGCTCCCAG",5,1.77,NA,NA,NA,NA,NA,NA,"stop","S41G E141R G146*",3
"lib2","SARS-CoV-2","TTTACTCCGAAAACAG",3,32.72,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","Y35L C102I N107W L125G S139R",5
"lib2","SARS-CoV-2","TTTACTCTATTCACAA",1,0.82,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I28K F134W G172Y",3
"lib2","SARS-CoV-2","TTTACTCTTTTCTATA",4,17.72,9.44,-1.4,0.11,2.68,1.04,0.01,">1 nonsynonymous","T55G V77M P169M",3
"lib2","SARS-CoV-2","TTTACTGAAAATGGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R25S S53G D97C N157L P169*",5
"lib2","SARS-CoV-2","TTTACTGAACAACTGG",4,45.79,9.89,-0.95,0.06,2.11,1.06,0,">1 nonsynonymous","L38F F99M T201V",3
"lib2","SARS-CoV-2","TTTACTGAATCCGAAT",6,41.49,6.13,-4.71,0.84,1.5,1.22,0.02,">1 nonsynonymous","A14F S45C Y121M",3
"lib2","SARS-CoV-2","TTTACTGCGTTAGCGC",10,17.71,NA,NA,NA,NA,NA,NA,"stop","F62* L125R P133L",3
"lib2","SARS-CoV-2","TTTACTGTTAGAATCT",1,0.05,NA,NA,NA,NA,NA,NA,"stop","W23S D59* Y91F G117D R127S",5
"lib2","SARS-CoV-2","TTTACTTACCCACTCC",9,121.75,8.65,-2.18,0.1,2.91,1.08,0,">1 nonsynonymous","P149A Y159I",2
"lib2","SARS-CoV-2","TTTACTTCACGCCTAT",6,107.48,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","P82L S113P N120S F134G Y159T",5
"lib2","SARS-CoV-2","TTTACTTCCACCGATA",1,0,NA,NA,NA,NA,NA,NA,"stop","P7* P82S T100S G116Q F160* G174E",6
"lib2","SARS-CoV-2","TTTACTTTAATGATAC",6,61.39,9.54,-1.3,0.08,2.27,1.03,0,">1 nonsynonymous","G86S T201A",2
"lib2","SARS-CoV-2","TTTAGAAACGACATTC",19,348.89,9.18,-1.66,0.07,2.46,1.05,0,">1 nonsynonymous","Y123T T170A",2
"lib2","SARS-CoV-2","TTTAGAAAGAGTTATC",1,21.12,6,-4.84,2,3,1.12,0,">1 nonsynonymous","C49D F126V R136C",3
"lib2","SARS-CoV-2","TTTAGAAAGTATTTAC",8,82.28,10.86,0.02,0.07,2.93,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTAGAAATTGTTACC",4,67.73,10.8,-0.04,0.05,3,1.02,0,"1 nonsynonymous","F134W",1
"lib2","SARS-CoV-2","TTTAGAACAACCTATG",3,51.92,6,-4.84,1.1,1.5,1.14,0.01,">1 nonsynonymous","V37R V103M Y143L",3
"lib2","SARS-CoV-2","TTTAGAACTTACTTAA",7,29.75,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","F12C Y91V N107S F156L",4
"lib2","SARS-CoV-2","TTTAGAAGACATACTT",8,93.25,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","L60N L122G L131S",3
"lib2","SARS-CoV-2","TTTAGAAGCATATCCT",8,214.47,10.69,-0.15,0.03,2.92,1.09,0,"1 nonsynonymous","L60S",1
"lib2","SARS-CoV-2","TTTAGAAGCCCCACCC",6,1.05,NA,NA,NA,NA,NA,NA,"stop","G86* Y119D K128R",3
"lib2","SARS-CoV-2","TTTAGAAGCCCCATCT",6,39.63,6,-4.84,2,3,1.11,0,">1 nonsynonymous","V37F A81H A105P Y119K G174R",5
"lib2","SARS-CoV-2","TTTAGAATGGAGATTG",6,42.26,6.6,-4.24,0.67,1.5,1.12,0.05,">1 nonsynonymous","N1L A89S A105W N120R E141L",5
"lib2","SARS-CoV-2","TTTAGAATTACACGAC",5,48.22,8.45,-2.38,0.15,2.12,1.1,0.01,">1 nonsynonymous","F8W G74V P197A",3
"lib2","SARS-CoV-2","TTTAGAATTCTATTAT",1,1.18,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D97S Y123D A145Y F160L",4
"lib2","SARS-CoV-2","TTTAGACCCAGAATGC",3,0.19,NA,NA,NA,NA,NA,NA,"stop","S45T D68* Q84Y D90N Y121C Y143V G155C",7
"lib2","SARS-CoV-2","TTTAGACGGAGACTAC",2,57.47,9.27,-1.57,0.08,1.8,1.09,0,">1 nonsynonymous","V11D T55S E154M",3
"lib2","SARS-CoV-2","TTTAGACTACTCCAAT",1,0.16,NA,NA,NA,NA,NA,NA,"stop","C6H A89T P96R N107D N120L K132P S139*",7
"lib2","SARS-CoV-2","TTTAGAGAAACCGTCT",7,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13R N151V V182K T201G",4
"lib2","SARS-CoV-2","TTTAGAGATAAGACTG",2,52.4,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","A22T C31S A42V Q176L",4
"lib2","SARS-CoV-2","TTTAGAGCACCAGAAC",2,7.61,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F8Y S36A C150S",3
"lib2","SARS-CoV-2","TTTAGAGGCGATAATA",4,11.07,6.29,-4.54,0.49,1.5,1.13,0.02,">1 nonsynonymous","N1M P82M Q168G",3
"lib2","SARS-CoV-2","TTTAGAGGGAAGTTAG",5,0,NA,NA,NA,NA,NA,NA,"stop","R27E Y50* D68L G146A",4
"lib2","SARS-CoV-2","TTTAGATAATTTCCCA",1,0,NA,NA,NA,NA,NA,NA,"stop","N4H K48M K94*",3
"lib2","SARS-CoV-2","TTTAGATCCTGTGATA",3,16.97,6,-4.84,2,1.5,1.14,0.07,">1 nonsynonymous","F99N G146V",2
"lib2","SARS-CoV-2","TTTAGATGCGCAACAT",11,3.42,NA,NA,NA,NA,NA,NA,"stop","L95*",1
"lib2","SARS-CoV-2","TTTAGATTACAAGTTG",3,27.59,10.29,-0.55,0.07,2.94,1.12,0,">1 nonsynonymous","F156L A192H",2
"lib2","SARS-CoV-2","TTTAGATTAGATAGAC",1,12.8,8.37,-2.46,0.22,2.15,1.24,0.03,">1 nonsynonymous","C61A R73T D90L",3
"lib2","SARS-CoV-2","TTTAGCAACACGAACT",1,0,NA,NA,NA,NA,NA,NA,"stop","A89R D98* A105Y N151I",4
"lib2","SARS-CoV-2","TTTAGCAAGATAAATG",7,5.57,NA,NA,NA,NA,NA,NA,"stop","S36* A89N V103L V181W",4
"lib2","SARS-CoV-2","TTTAGCACGAATAAAG",4,3.95,NA,NA,NA,NA,NA,NA,"stop","Y50S N92* W106S I142N V173E",5
"lib2","SARS-CoV-2","TTTAGCACTTCCTTAA",1,0,NA,NA,NA,NA,NA,NA,"stop","V71* T85G T170L",3
"lib2","SARS-CoV-2","TTTAGCATAAAAGAAG",1,1.11,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33V K56V D98A I104M V180R S200T",6
"lib2","SARS-CoV-2","TTTAGCATACATTGGT",3,3.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C31I P82I G166T",3
"lib2","SARS-CoV-2","TTTAGCCACGCCAACT",9,52.79,6,-4.84,2,3,1.08,0,">1 nonsynonymous","Y121G R127E",2
"lib2","SARS-CoV-2","TTTAGCCCCGCGGACA",12,209.08,10.85,0.01,0.05,2.92,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTAGCCTATATTACT",2,53.44,9.18,-1.66,0.1,2.16,1.02,0.01,">1 nonsynonymous","F99Y F134L F156V",3
"lib2","SARS-CoV-2","TTTAGCCTGACGAAGG",5,29.23,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F44Q F99T",2
"lib2","SARS-CoV-2","TTTAGCGAGGCCGGGC",2,46.91,10.8,-0.04,0.03,3,1.02,0,">1 nonsynonymous","N4S V37G",2
"lib2","SARS-CoV-2","TTTAGCGTGCTCTAAC",3,33.33,7.18,-3.65,0.32,1.5,1.17,0.02,">1 nonsynonymous","P7K A81T A105V",3
"lib2","SARS-CoV-2","TTTAGCGTTTAATAAA",5,52.91,9.03,-1.8,0.12,2.1,1.14,0.01,">1 nonsynonymous","C6S N64P R78A K128G L188W",5
"lib2","SARS-CoV-2","TTTAGCTAATTGGTAA",2,41.61,6,-4.84,2,3,1.1,0,">1 nonsynonymous","Y50R V77M Q144E G146V",4
"lib2","SARS-CoV-2","TTTAGCTACTAGCATG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W106R N120L",2
"lib2","SARS-CoV-2","TTTAGCTGGCCTATCA",2,10.09,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F12N G174P T201N",3
"lib2","SARS-CoV-2","TTTAGCTTTAACAAAG",4,10.77,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V52K N64Y I72A G152T",4
"lib2","SARS-CoV-2","TTTAGGAAAGTGACAC",8,37.58,6,-4.84,1.73,1.5,1.21,0.04,">1 nonsynonymous","L57T N110Y E135F",3
"lib2","SARS-CoV-2","TTTAGGAGAATACCAG",5,137.85,8.78,-2.05,0.05,2.79,1.14,0,">1 nonsynonymous","N4F R27S N157D",3
"lib2","SARS-CoV-2","TTTAGGAGCCCTAACA",2,3.04,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3C D59L D90H L122M Y165V K198L",6
"lib2","SARS-CoV-2","TTTAGGAGGAATTCTA",15,211.13,10.81,-0.02,0.05,2.92,1.1,0,"1 nonsynonymous","A192S",1
"lib2","SARS-CoV-2","TTTAGGAGTAGGTGCC",13,119.7,10.23,-0.6,0.05,2.72,1.08,0,">1 nonsynonymous","V37A Q163P T201M",3
"lib2","SARS-CoV-2","TTTAGGATAAATTTCG",14,110.02,9.43,-1.4,0.12,1.5,1.09,0.01,">1 nonsynonymous","T3D V103M",2
"lib2","SARS-CoV-2","TTTAGGATCATCCTTT",6,3.41,NA,NA,NA,NA,NA,NA,"stop","F12Q L60T R124*",3
"lib2","SARS-CoV-2","TTTAGGCATAGAAGAC",8,101.52,10.67,-0.17,0.05,2.95,1.03,0,">1 nonsynonymous","L38V T201H",2
"lib2","SARS-CoV-2","TTTAGGCCACACCTTA",21,216.99,9.71,-1.12,0.03,2.96,1.04,0,">1 nonsynonymous","Y159F K199I",2
"lib2","SARS-CoV-2","TTTAGGCGAACCTGAA",7,59.94,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","V52Y K94S L162V K198Q",4
"lib2","SARS-CoV-2","TTTAGGCGCCTGACCA",9,20.63,6.09,-4.75,1.13,1.5,1.2,0.03,">1 nonsynonymous","D34Y Y50I F99S F126T T201Y",5
"lib2","SARS-CoV-2","TTTAGGGAATGAGAGG",2,64.65,10.61,-0.22,0.05,3,1.02,0,">1 nonsynonymous","V115F H189Y",2
"lib2","SARS-CoV-2","TTTAGGGTAAAATCAG",4,35.68,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C49R D90Y T140F T170S",4
"lib2","SARS-CoV-2","TTTAGGTACTAAACTC",15,72.68,6,-4.84,2,1.5,1.22,0.02,">1 nonsynonymous","L57T G83C Y93I R136L C158R",5
"lib2","SARS-CoV-2","TTTAGGTCAAACGTCA",8,16.85,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","N1F L57G D97I V103K",4
"lib2","SARS-CoV-2","TTTAGGTCAGTGGTTA",4,50.74,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","N40V A89Q",2
"lib2","SARS-CoV-2","TTTAGGTCTAACAAGG",12,2.43,NA,NA,NA,NA,NA,NA,"stop","G9D G83* L122Y",3
"lib2","SARS-CoV-2","TTTAGTAATCTGCAGC",4,61.63,10.77,-0.06,0.06,3,1.03,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTAGTACCGCACACG",1,83.79,10.12,-0.71,0.05,2.84,1.02,0,">1 nonsynonymous","S45F S147N G166S",3
"lib2","SARS-CoV-2","TTTAGTAGTTAGGTCT",1,2.85,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","S36K",1
"lib2","SARS-CoV-2","TTTAGTATCGAATATA",7,47.09,6,-4.84,2,1.5,1.3,0.03,">1 nonsynonymous","L57M V65W K87S F99C W106I S113M",6
"lib2","SARS-CoV-2","TTTAGTATTCGGCGAA",5,70.86,10.76,-0.08,0.08,2.91,1.09,0,">1 nonsynonymous","P149I F160N",2
"lib2","SARS-CoV-2","TTTAGTCAAATAATGA",9,92.14,6,-4.84,1.59,1.5,1.2,0.03,">1 nonsynonymous","V77W D90N K114L F134Y C195Y K199C",6
"lib2","SARS-CoV-2","TTTAGTCAGATATCCG",2,73.96,10.84,0.01,0.06,2.92,1.05,0,">1 nonsynonymous","C61A N120Q K198Q",3
"lib2","SARS-CoV-2","TTTAGTCATGCTAGAA",1,8.22,NA,NA,NA,NA,NA,0.25,">1 nonsynonymous","L38Y I72G",2
"lib2","SARS-CoV-2","TTTAGTGAAACATAAC",4,11,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","L38I V71A R127L",3
"lib2","SARS-CoV-2","TTTAGTGAAGCTACAA",1,45.08,10.25,-0.58,0.07,2.83,1.03,0,">1 nonsynonymous","N30K D97N P149H P191S",4
"lib2","SARS-CoV-2","TTTAGTGATCTCGTCA",8,0.21,NA,NA,NA,NA,NA,NA,"stop","N107W T201*",2
"lib2","SARS-CoV-2","TTTAGTGCGAAACTTA",7,0,NA,NA,NA,NA,NA,NA,"stop","A22Q Y91W T148*",3
"lib2","SARS-CoV-2","TTTAGTGCGTGCTCCA",5,2.85,NA,NA,NA,NA,NA,NA,"stop","F12S S41* P82E P133I",4
"lib2","SARS-CoV-2","TTTAGTGGCACAATTA",1,15.08,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","N107R Y123S Y165H",3
"lib2","SARS-CoV-2","TTTAGTGGTACTCGGA",3,2.85,NA,NA,NA,NA,NA,NA,"stop","S41* P133S",2
"lib2","SARS-CoV-2","TTTAGTGGTCTTGTTT",1,7.94,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","N13S V71W Y143R",3
"lib2","SARS-CoV-2","TTTAGTGTCACTCCTT",10,148.54,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","D34R F167M",2
"lib2","SARS-CoV-2","TTTAGTGTCATGTATA",1,17.23,10.92,0.08,0.17,2.82,1.05,0.01,">1 nonsynonymous","L5S K114R N120Q",3
"lib2","SARS-CoV-2","TTTAGTGTTGATGTTT",8,23.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N13G S19E L57Q T100K S200F",5
"lib2","SARS-CoV-2","TTTAGTTGACTACTAT",10,203.39,9.5,-1.33,0.04,2.84,1.06,0,">1 nonsynonymous","A42R K128F A145E",3
"lib2","SARS-CoV-2","TTTATAAAAAAATTAT",4,56.34,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","N92W A105K T201L",3
"lib2","SARS-CoV-2","TTTATAAAAAAGTGAA",2,59.33,10.84,0,0.06,2.85,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATAAAAATGTCTG",6,2.51,NA,NA,NA,NA,NA,NA,"stop","P82* Y119H",2
"lib2","SARS-CoV-2","TTTATAAAATTTTCTC",10,60.03,10.84,0,0.05,2.99,1.02,0,">1 nonsynonymous","A42G E141T",2
"lib2","SARS-CoV-2","TTTATAAACGACAAAA",5,11.52,10.39,-0.45,0.13,2.8,1.21,0.01,"1 nonsynonymous","I2S",1
"lib2","SARS-CoV-2","TTTATAAACGTTGACC",5,1.54,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89R Y123S Q163L",3
"lib2","SARS-CoV-2","TTTATAAACTCGCGAT",21,3.3,NA,NA,NA,NA,NA,NA,"stop","C6N Y21R D34*",3
"lib2","SARS-CoV-2","TTTATAAATAATGACA",3,49.88,10.29,-0.54,0.04,2.93,1.05,0,">1 nonsynonymous","F44V P54S",2
"lib2","SARS-CoV-2","TTTATAAATGGTTTCT",7,35.72,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","F12I Y50S D75E N92K",4
"lib2","SARS-CoV-2","TTTATAACAAAATCTA",1,27.58,10.45,-0.39,0.06,2.92,1.09,0,">1 nonsynonymous","K132S T170S",2
"lib2","SARS-CoV-2","TTTATAACCAAAATAA",8,64.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","Y91E L122P I142Y",3
"lib2","SARS-CoV-2","TTTATAACCAGAACTA",1,15.94,10.82,-0.02,0.07,2.93,1.12,0,">1 nonsynonymous","I28M T148A T201V",3
"lib2","SARS-CoV-2","TTTATAACGACGAACA",5,179.53,8.46,-2.38,0.08,2.7,1.09,0,">1 nonsynonymous","G146V F160A",2
"lib2","SARS-CoV-2","TTTATAACGGGTCTAT",2,60.69,10.79,-0.05,0.05,2.94,1.06,0,"1 nonsynonymous","T3V",1
"lib2","SARS-CoV-2","TTTATAACTTTCGATT",1,42.19,6,-4.84,2,3,1.13,0.02,">1 nonsynonymous","S113H Y165M G174Q",3
"lib2","SARS-CoV-2","TTTATAAGAAAAGCGA",2,18.35,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","S41N T85M C102S S147A Q168V P177S",6
"lib2","SARS-CoV-2","TTTATAAGCAGCCGGC",5,26.41,9.36,-1.47,0.17,2.08,1.09,0.02,">1 nonsynonymous","N13V L57M",2
"lib2","SARS-CoV-2","TTTATAAGCCAAGCTC",2,16.75,8.76,-2.08,0.1,2.48,1.08,0.01,">1 nonsynonymous","G74F L131I",2
"lib2","SARS-CoV-2","TTTATAAGCTGAGGAT",14,224.47,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","A18V I28P Q144P G155P L188T",5
"lib2","SARS-CoV-2","TTTATAATAGAACTGC",3,47.41,8.31,-2.53,0.16,2.2,1.12,0.01,">1 nonsynonymous","A81V F126R",2
"lib2","SARS-CoV-2","TTTATAATGGACAAAA",2,20.86,10.79,-0.04,0.08,2.89,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATAATGGTGAACG",1,8.84,7.68,-3.15,0.43,1.5,1.03,0.05,">1 nonsynonymous","W23R A105G G146Y",3
"lib2","SARS-CoV-2","TTTATAATTCAGACGC",3,16.07,10.41,-0.42,0.13,2.83,1.09,0,">1 nonsynonymous","T15I S41D L131I",3
"lib2","SARS-CoV-2","TTTATAATTGCCGGAC",5,70.29,8.8,-2.03,0.05,2.89,1.08,0,">1 nonsynonymous","D98K G117L",2
"lib2","SARS-CoV-2","TTTATAATTTTACGAT",9,75.05,9.25,-1.59,0.07,1.85,1.03,0,"1 nonsynonymous","R127Q",1
"lib2","SARS-CoV-2","TTTATACACAGTCAAA",2,60.98,10.68,-0.16,0.03,2.93,1.07,0,"1 nonsynonymous","S129C",1
"lib2","SARS-CoV-2","TTTATACAGTATAATC",20,399.59,6,-4.84,2,1.5,1.15,0,">1 nonsynonymous","Y35R T100L Y175K P191R",4
"lib2","SARS-CoV-2","TTTATACATTAACTGT",8,149.29,10.72,-0.11,0.06,2.87,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATACCCGATTGAA",3,16.6,10.64,-0.19,0.09,2.88,1.13,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTATACCCTTATCTG",6,186.92,10.45,-0.39,0.04,2.91,1.06,0,">1 nonsynonymous","D97R S164V",2
"lib2","SARS-CoV-2","TTTATACCGGTTACCG",4,34.82,6.24,-4.6,0.83,1.5,1.08,0.03,">1 nonsynonymous","G9K D98I T140F P177S T201S",5
"lib2","SARS-CoV-2","TTTATACCTTAATTTA",3,0.02,NA,NA,NA,NA,NA,NA,"stop","T63H F99*",2
"lib2","SARS-CoV-2","TTTATACTCTGCTACA",4,11.86,6.61,-4.22,0.45,1.5,1.03,0.03,">1 nonsynonymous","S43F D90I A105Q",3
"lib2","SARS-CoV-2","TTTATAGATCCGCTTT",7,141.98,10.45,-0.39,0.04,2.97,1.01,0,">1 nonsynonymous","L38V D59N",2
"lib2","SARS-CoV-2","TTTATAGCACACTAAA",6,31.21,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","S53R A105Q C158E",3
"lib2","SARS-CoV-2","TTTATAGCTATCCATT",8,85.85,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S41R N92M V115W L122K",4
"lib2","SARS-CoV-2","TTTATAGGAATAGAAC",15,30.6,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","T3R C6Y Y93I D98M L122R F156D",6
"lib2","SARS-CoV-2","TTTATAGGGAAACTTA",12,15.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I88C C102G Y121V C150R Y159G",5
"lib2","SARS-CoV-2","TTTATAGTCACGACGG",1,19.45,9.76,-1.07,0.19,2.09,1.08,0.01,">1 nonsynonymous","I2E K48L F185K",3
"lib2","SARS-CoV-2","TTTATATAGATCAGTA",2,67.81,10.91,0.07,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATATATAATCTAT",7,58.47,9.85,-0.99,0.04,2.87,1.06,0,">1 nonsynonymous","L57W E154H",2
"lib2","SARS-CoV-2","TTTATATCAACAGGGA",6,34.18,9.32,-1.52,0.07,1.99,1.05,0,">1 nonsynonymous","W106C V115R",2
"lib2","SARS-CoV-2","TTTATATCTCCGAGCA",1,9.99,11.16,0.32,0.06,2.97,1.05,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","TTTATATGATTTGCTG",4,0,NA,NA,NA,NA,NA,NA,"stop","G9* A33F Y91N P191K S200E",5
"lib2","SARS-CoV-2","TTTATATGGGTTGTCT",1,0.55,NA,NA,NA,NA,NA,NA,"stop","F44D D59*",2
"lib2","SARS-CoV-2","TTTATATGTATATCAC",7,11.72,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I88K V103G Y119P S129L",4
"lib2","SARS-CoV-2","TTTATATGTCTTAATA",5,18.87,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","V11A T100A G146T F156C",4
"lib2","SARS-CoV-2","TTTATATTCAAAACTA",3,94.4,10.91,0.07,0.05,2.98,1.02,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","TTTATATTCACTACGA",2,9.73,6,-4.84,2,3,1.03,0,">1 nonsynonymous","F12N L60K Q84V L95G R124N L131R Y143I",7
"lib2","SARS-CoV-2","TTTATATTCATCCTGA",4,56.28,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","F62K D90H P177V",3
"lib2","SARS-CoV-2","TTTATATTTTAGAGGG",5,30.7,10.21,-0.63,0.12,2.42,1.07,0.01,">1 nonsynonymous","T55S W106K",2
"lib2","SARS-CoV-2","TTTATCAATATAAACA",5,109.79,8.56,-2.28,0.07,2.72,1.08,0,">1 nonsynonymous","V115M G146C",2
"lib2","SARS-CoV-2","TTTATCATATCTTACC",1,5.96,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7E Q79R T85G N157K P177G",5
"lib2","SARS-CoV-2","TTTATCCAAAGCGACC",13,103.61,6,-4.84,2,3,1.13,0,">1 nonsynonymous","A22E V77A W106S",3
"lib2","SARS-CoV-2","TTTATCCACCTAATAC",9,168.89,10.32,-0.52,0.05,2.89,1.04,0,">1 nonsynonymous","N13K V37N K198E",3
"lib2","SARS-CoV-2","TTTATCCACTTGGAAG",11,147.13,10.69,-0.15,0.06,2.88,1.05,0,">1 nonsynonymous","V37I S129I",2
"lib2","SARS-CoV-2","TTTATCCCAACAAATC",2,131.13,10.77,-0.07,0.04,2.96,1.04,0,"1 nonsynonymous","I104V",1
"lib2","SARS-CoV-2","TTTATCCCAAGCAGCA",11,32.31,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F44Y C49Y Y91W P96A Y143C",5
"lib2","SARS-CoV-2","TTTATCCCGGAATTTT",6,59.07,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","F99S L122P",2
"lib2","SARS-CoV-2","TTTATCCCTCTCACCG",10,111.61,9.35,-1.48,0.08,2.36,1.06,0,">1 nonsynonymous","N4S A14F K87Y F160I P197L",5
"lib2","SARS-CoV-2","TTTATCCGAATACTCA",2,0.11,NA,NA,NA,NA,NA,NA,"stop","Y93*",1
"lib2","SARS-CoV-2","TTTATCCGAGTTCAGG",7,45.39,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R73W C150V G155P T201K",4
"lib2","SARS-CoV-2","TTTATCCTTCTTTAGA",1,0.35,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G101W",1
"lib2","SARS-CoV-2","TTTATCGACCCCCCAC",6,9.46,NA,NA,NA,NA,NA,0.23,"1 nonsynonymous","F70W",1
"lib2","SARS-CoV-2","TTTATCGTAATATCCC",1,2.5,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F70R",1
"lib2","SARS-CoV-2","TTTATCGTTTCCAAGT",1,24.42,6.02,-4.82,1.45,1.5,1.18,0.03,">1 nonsynonymous","W23V V115N V153F",3
"lib2","SARS-CoV-2","TTTATCTAAATCCACG",3,44.91,10.78,-0.06,0.07,2.9,1.15,0,"1 nonsynonymous","L122I",1
"lib2","SARS-CoV-2","TTTATCTATGGCATGA",6,61.92,6,-4.84,2,3,1.14,0,">1 nonsynonymous","G51C G83L P96K L131A P197S",5
"lib2","SARS-CoV-2","TTTATCTGTGCTTTAA",11,49.44,6,-4.84,2,3,1.21,0,">1 nonsynonymous","S113M Y121F Y165R",3
"lib2","SARS-CoV-2","TTTATCTTATGAATAT",17,309.54,10.83,-0.01,0.04,2.9,1.11,0,"1 nonsynonymous","T140S",1
"lib2","SARS-CoV-2","TTTATCTTCTTTGAGT",1,0,NA,NA,NA,NA,NA,NA,"stop","R25I Y91* R124T L187D",4
"lib2","SARS-CoV-2","TTTATGAAAGATGATT",12,132.74,6,-4.84,2,1.5,1.16,0,">1 nonsynonymous","Y39T I138W C158T",3
"lib2","SARS-CoV-2","TTTATGAAATCCAGGT",10,176.34,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","V32N Y50S L60K",3
"lib2","SARS-CoV-2","TTTATGAAATTAGCCT",7,2.27,NA,NA,NA,NA,NA,NA,"stop","V37* R73T T85S K94T S184R",5
"lib2","SARS-CoV-2","TTTATGACAAACCTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","D59C Y66C Y119* F126S",4
"lib2","SARS-CoV-2","TTTATGACACATCTAT",2,46.23,10.04,-0.8,0.12,2.03,1.05,0.01,">1 nonsynonymous","V37S T100D G152R A190E G196A",5
"lib2","SARS-CoV-2","TTTATGACCCACCCGC",1,28.93,6,-4.84,2,1.5,1.19,0.02,"1 nonsynonymous","C158P",1
"lib2","SARS-CoV-2","TTTATGACGAGACTAC",6,37.36,6.24,-4.59,0.54,1.5,1.15,0.01,">1 nonsynonymous","L5R V52L L95I W106C A145S",5
"lib2","SARS-CoV-2","TTTATGACGCATAAAT",4,0.41,NA,NA,NA,NA,NA,NA,"stop","A18V C49E N120*",3
"lib2","SARS-CoV-2","TTTATGAGGGGACCGT",7,74.67,9.65,-1.19,0.1,2.16,1.03,0,">1 nonsynonymous","V71T G83D",2
"lib2","SARS-CoV-2","TTTATGATAGGTTTAA",5,52.48,9.79,-1.05,0.07,2.18,1.1,0,">1 nonsynonymous","C49F C61L",2
"lib2","SARS-CoV-2","TTTATGCAAAACAATA",5,81.11,10.16,-0.68,0.04,2.88,1.02,0,"1 nonsynonymous","V173S",1
"lib2","SARS-CoV-2","TTTATGCAACACGATG",4,138.15,10.77,-0.07,0.03,2.91,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATGCACGACCGAT",7,2.43,NA,NA,NA,NA,NA,NA,"stop","D90N P96* N120F V153I",4
"lib2","SARS-CoV-2","TTTATGCATACTTTAG",10,231.89,6.23,-4.6,0.52,1.5,1.19,0.01,">1 nonsynonymous","R25P Y50F K56A",3
"lib2","SARS-CoV-2","TTTATGCATCACCGCT",3,14.75,6,-4.84,2,1.5,1.13,0.03,">1 nonsynonymous","G155P V181A",2
"lib2","SARS-CoV-2","TTTATGCATGATTGAA",9,15.83,6,-4.84,2,1.5,1.22,0.06,">1 nonsynonymous","A33N P96D C102W C150G",4
"lib2","SARS-CoV-2","TTTATGCCCCTCTTTC",1,23.13,10.5,-0.34,0.07,2.97,1.07,0.01,"1 nonsynonymous","S41V",1
"lib2","SARS-CoV-2","TTTATGCGTAAACAAA",5,10.68,7.4,-3.43,0.5,1.73,1.24,0.06,">1 nonsynonymous","C49H L57R V103H G166S",4
"lib2","SARS-CoV-2","TTTATGGAAAACAGCT",3,8.46,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","A67F N107K Y123D Q163L K198T",5
"lib2","SARS-CoV-2","TTTATGGAACAGTACG",3,81.23,9.92,-0.92,0.09,2.45,1.04,0,"1 nonsynonymous","A89G",1
"lib2","SARS-CoV-2","TTTATGGACCTCCTTA",7,100.06,10.82,-0.01,0.03,2.93,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATGGATAACGCTG",4,56.45,10.8,-0.04,0.05,2.96,1.06,0,"1 nonsynonymous","S41C",1
"lib2","SARS-CoV-2","TTTATGGCAGAGACCA",1,0.2,NA,NA,NA,NA,NA,NA,"stop","N4A S45Y E76*",3
"lib2","SARS-CoV-2","TTTATGGCTACCTGCA",12,92.32,6,-4.84,2,3,1.13,0,">1 nonsynonymous","F8T N30T G86S F99T R127E",5
"lib2","SARS-CoV-2","TTTATGGGTTCCGTAA",2,64.13,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","G146V G166L",2
"lib2","SARS-CoV-2","TTTATGTAAGTATTTG",7,2,NA,NA,NA,NA,NA,NA,"stop","K87* V180W",2
"lib2","SARS-CoV-2","TTTATGTAATTGTCGT",2,64.04,10.18,-0.65,0.06,2.58,1.1,0,"1 nonsynonymous","P133W",1
"lib2","SARS-CoV-2","TTTATGTACACGTTAA",3,36.01,10.12,-0.71,0.05,2.94,1.02,0,"1 nonsynonymous","T170K",1
"lib2","SARS-CoV-2","TTTATGTACTATGATG",1,5.94,6.46,-4.37,2,3,1.1,0,">1 nonsynonymous","A89S Y143R",2
"lib2","SARS-CoV-2","TTTATGTAGAATAATC",4,25.36,10.34,-0.5,0.09,2.72,1,0.01,"1 nonsynonymous","D34G",1
"lib2","SARS-CoV-2","TTTATGTATAGATATC",2,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T55D K87P I104N",3
"lib2","SARS-CoV-2","TTTATGTATCGTTACG",7,90.28,9.73,-1.11,0.13,2.19,1.1,0.01,">1 nonsynonymous","D97H Y123E",2
"lib2","SARS-CoV-2","TTTATGTCAGACAAGA",4,20.99,10.74,-0.1,0.04,2.87,1.12,0,"1 nonsynonymous","F44Y",1
"lib2","SARS-CoV-2","TTTATGTCATATTCGA",6,14.37,6,-4.84,2,1.5,1.24,0.05,">1 nonsynonymous","G101D A145V",2
"lib2","SARS-CoV-2","TTTATGTGATTTTATA",3,17.55,6,-4.84,2,3,1.15,0,">1 nonsynonymous","L95S G155L V173S R179G",4
"lib2","SARS-CoV-2","TTTATGTTACCGTTGA",9,69.27,6,-4.84,0.8,1.5,1.16,0.01,">1 nonsynonymous","P82W G166L",2
"lib2","SARS-CoV-2","TTTATTAAATTAATAG",18,89.75,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","L5V F62G L95W P133V C150M",5
"lib2","SARS-CoV-2","TTTATTAACACATTAC",3,11.15,NA,NA,NA,NA,NA,NA,"stop","F12Y R25L S53* S129K",4
"lib2","SARS-CoV-2","TTTATTAATCTTTCAT",1,9.13,NA,NA,NA,NA,NA,NA,"stop","S43R N107* T140K",3
"lib2","SARS-CoV-2","TTTATTACACTTGAAA",2,0,NA,NA,NA,NA,NA,NA,"stop","V77* G152S",2
"lib2","SARS-CoV-2","TTTATTACCATCACAA",4,57.05,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","R16G G86V Q168M",3
"lib2","SARS-CoV-2","TTTATTACTGCGATAA",5,14.33,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C61Y I88V A105L",3
"lib2","SARS-CoV-2","TTTATTAGACCCACCT",3,1.77,NA,NA,NA,NA,NA,NA,"stop","F99I V103G S113*",3
"lib2","SARS-CoV-2","TTTATTAGCAGTAATC",9,83.35,10.45,-0.39,0.04,2.76,1.05,0,"1 nonsynonymous","D98F",1
"lib2","SARS-CoV-2","TTTATTAGGTCTAGAC",13,78.06,6,-4.84,2,3,1.13,0,">1 nonsynonymous","R16L Y93R Y119S F126L N171L Y175L L188R",7
"lib2","SARS-CoV-2","TTTATTCAAAAGATAA",5,35.01,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","C49F D137N A190T",3
"lib2","SARS-CoV-2","TTTATTCAAGTCGGAT",5,57.55,10.13,-0.7,0.05,2.95,1.07,0,">1 nonsynonymous","L122Y G146D",2
"lib2","SARS-CoV-2","TTTATTCCCATTTACG",12,284.63,10.86,0.02,0.04,2.95,1.06,0,"1 nonsynonymous","S129D",1
"lib2","SARS-CoV-2","TTTATTCGCGAACCTA",2,3.35,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","K26Q V103L",2
"lib2","SARS-CoV-2","TTTATTCTGGATCAAA",12,3.32,NA,NA,NA,NA,NA,NA,"stop","N1* Y66M A81F V115C",4
"lib2","SARS-CoV-2","TTTATTGCCGAAGCGT",2,45.85,10.87,0.03,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTATTGGGAAGCTAG",4,118.66,6.7,-4.14,0.31,1.5,1.16,0.01,">1 nonsynonymous","G146L N151F G155S",3
"lib2","SARS-CoV-2","TTTATTGGGTAAAGCA",2,10.74,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","G9M A18M Y50I A89V N110F L131N G146L E186D",8
"lib2","SARS-CoV-2","TTTATTTAAGAAGACA",1,16.2,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","R124T T170C",2
"lib2","SARS-CoV-2","TTTATTTATCAAGAGA",1,6.61,6,-4.84,2,1.5,1.13,0.06,">1 nonsynonymous","W23L L95P D98A D112F",4
"lib2","SARS-CoV-2","TTTATTTCGGAGTAAC",7,86.33,10.64,-0.2,0.07,2.88,1.05,0,"1 nonsynonymous","V32A",1
"lib2","SARS-CoV-2","TTTATTTGTAAGATAA",9,159.09,10.31,-0.53,0.03,2.88,1.05,0,">1 nonsynonymous","N4H N40L N151E",3
"lib2","SARS-CoV-2","TTTCAAAACCTGACGA",5,51.35,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N24L S45Y L122R E141F C150E",5
"lib2","SARS-CoV-2","TTTCAAAAGGGAAAGT",11,67.92,6,-4.84,2,1.5,1.26,0.01,">1 nonsynonymous","A81V K87R Y123T S164L",4
"lib2","SARS-CoV-2","TTTCAAACAAAATCAA",4,0.64,NA,NA,NA,NA,NA,NA,"stop","N4H Y121* S129L",3
"lib2","SARS-CoV-2","TTTCAAACAAATGTGC",3,52.1,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","F44W L57G D90Q T100F Q176S",5
"lib2","SARS-CoV-2","TTTCAAACAACTATGA",30,494.13,10.75,-0.09,0.03,2.92,1.09,0,"1 nonsynonymous","K132Y",1
"lib2","SARS-CoV-2","TTTCAAACGATCAATT",1,4.43,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A18T W23L T63S Q168K",4
"lib2","SARS-CoV-2","TTTCAAACGCTATATG",4,60.8,8.66,-2.18,0.1,2.01,1.14,0,"1 nonsynonymous","P161V",1
"lib2","SARS-CoV-2","TTTCAAACGTACTCGC",4,24.49,10.12,-0.72,0.09,2.64,1.08,0.01,">1 nonsynonymous","N1L C6D L60C",3
"lib2","SARS-CoV-2","TTTCAAAGAAAAGACT",2,17.05,6.19,-4.64,0.92,1.73,1.3,0.03,">1 nonsynonymous","T3V D34V R124H",3
"lib2","SARS-CoV-2","TTTCAAAGGGCACGAA",7,22.93,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","L60R V103G R127Q E141S",4
"lib2","SARS-CoV-2","TTTCAAAGTAAGAATT",1,0.92,NA,NA,NA,NA,NA,NA,"stop","A33E L188*",2
"lib2","SARS-CoV-2","TTTCAAAGTCTTTTGT",2,30.28,10.66,-0.17,0.1,2.78,1.16,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCAAATAAAGTCTT",5,0.19,NA,NA,NA,NA,NA,NA,"stop","N13Y N92* C102Y S200G",4
"lib2","SARS-CoV-2","TTTCAAATAAGACGGG",1,30.06,10.28,-0.56,0.07,2.82,1.03,0,">1 nonsynonymous","D98F G155Q",2
"lib2","SARS-CoV-2","TTTCAAATTCCCGTCT",6,42.03,10.27,-0.57,0.05,2.87,1.07,0,">1 nonsynonymous","S41M S139C",2
"lib2","SARS-CoV-2","TTTCAACAAACGGTCC",2,67.81,10.53,-0.31,0.04,2.99,1.02,0,"1 nonsynonymous","P169S",1
"lib2","SARS-CoV-2","TTTCAACAACGCATTA",7,165.4,10.17,-0.67,0.04,2.84,1.05,0,">1 nonsynonymous","F44P S53R",2
"lib2","SARS-CoV-2","TTTCAACAATTGATCG",4,28.99,10.38,-0.46,0.09,2.82,1.18,0,"1 nonsynonymous","A22T",1
"lib2","SARS-CoV-2","TTTCAACACAGGTCCC",1,6.12,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","S53F L131R G155T",3
"lib2","SARS-CoV-2","TTTCAACAGGGAATAT",1,12.46,9.21,-1.63,0.22,1.77,1.13,0.02,">1 nonsynonymous","V20C F62L K128P N151H",4
"lib2","SARS-CoV-2","TTTCAACAGGTCAATA",10,150.6,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","N157I G172C K198M",3
"lib2","SARS-CoV-2","TTTCAACGACTAGGCT",4,0,NA,NA,NA,NA,NA,NA,"stop","L5* G117S S129H V173*",4
"lib2","SARS-CoV-2","TTTCAACTAGCCCGTA",1,21.61,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","D59Q P161Y",2
"lib2","SARS-CoV-2","TTTCAACTATTTCGTT",3,17.8,10.72,-0.12,0.04,3,1,0,">1 nonsynonymous","K132S T140C N171H",3
"lib2","SARS-CoV-2","TTTCAACTGAGATTAG",2,13.7,8.83,-2,0.18,1.57,1.12,0.02,">1 nonsynonymous","L5T D98E W106K S113A N130M",5
"lib2","SARS-CoV-2","TTTCAAGAATACTCTG",11,133.9,9.84,-0.99,0.04,2.91,1.08,0,">1 nonsynonymous","T100F L125P",2
"lib2","SARS-CoV-2","TTTCAAGCAAATTGTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20N E141R",2
"lib2","SARS-CoV-2","TTTCAAGCCTAAAATT",2,14.46,6,-4.84,2,1.5,1.11,0.04,">1 nonsynonymous","D68V D98V",2
"lib2","SARS-CoV-2","TTTCAATAGCAGGATG",2,49.11,8.83,-2.01,0.22,1.5,1.08,0.03,"1 nonsynonymous","I80F",1
"lib2","SARS-CoV-2","TTTCACAAGAAGGCAA",1,8.71,10.55,-0.29,0.07,2.91,1.06,0,">1 nonsynonymous","T3P K48L",2
"lib2","SARS-CoV-2","TTTCACAATACCGTTT",15,0.25,NA,NA,NA,NA,NA,NA,"stop","G9K D34R P82F I88* G101E",5
"lib2","SARS-CoV-2","TTTCACACACGATTGC",1,35.98,6,-4.84,1.46,1.5,1.14,0.02,">1 nonsynonymous","G9V P96M Y143R Q168M",4
"lib2","SARS-CoV-2","TTTCACACTTCTTATA",2,88.13,8.28,-2.56,0.16,2.51,1.13,0.01,">1 nonsynonymous","I2L V37T L95V K114R N157R",5
"lib2","SARS-CoV-2","TTTCACAGACCGCTAA",3,0.1,NA,NA,NA,NA,NA,NA,"stop","T15F C49T F99N F185*",4
"lib2","SARS-CoV-2","TTTCACAGGCTCGTCG",8,40.85,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","T3L C158N G174L",3
"lib2","SARS-CoV-2","TTTCACATACTAATCA",4,32.6,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L C61R F99K P161N",4
"lib2","SARS-CoV-2","TTTCACATCAATTCGT",2,17.68,9.36,-1.48,0.08,2.59,1.09,0,">1 nonsynonymous","R16G N118Y P191T",3
"lib2","SARS-CoV-2","TTTCACCACAAACAAA",2,1.54,NA,NA,NA,NA,NA,NA,"stop","S41C V71* P149Q",3
"lib2","SARS-CoV-2","TTTCACCACTGCAAAA",8,68.96,6,-4.84,2,3,1.17,0,">1 nonsynonymous","W106I L131G",2
"lib2","SARS-CoV-2","TTTCACCATCCGGACA",5,18.1,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","F134H P161Y",2
"lib2","SARS-CoV-2","TTTCACCGACTTTGGA",5,30.05,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","R16W S113F Q144M E154S",4
"lib2","SARS-CoV-2","TTTCACGACTACCGTC",6,57.91,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G86W K94Q I138K",3
"lib2","SARS-CoV-2","TTTCACGAGCCGGTTT",7,2.37,NA,NA,NA,NA,NA,NA,"stop","P82*",1
"lib2","SARS-CoV-2","TTTCACGCAATTTCCA",3,38.78,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","C61G K94S Q176L",3
"lib2","SARS-CoV-2","TTTCACGTGAATAGAA",5,0.95,NA,NA,NA,NA,NA,NA,"stop","V11* P96T D112V",3
"lib2","SARS-CoV-2","TTTCACTACTCACCAC",3,3.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F99P D137R",2
"lib2","SARS-CoV-2","TTTCACTAGTCCGGAC",1,1.23,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L162E",1
"lib2","SARS-CoV-2","TTTCACTATTCAACTA",7,48.57,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V20L A67N",2
"lib2","SARS-CoV-2","TTTCACTATTCCCGAA",1,4.09,NA,NA,NA,NA,NA,NA,"stop","V77* N107T",2
"lib2","SARS-CoV-2","TTTCACTCAAAAAATC",15,44.43,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","L57P D90P Y143S",3
"lib2","SARS-CoV-2","TTTCACTCGAAAAGAA",7,78.58,10.06,-0.78,0.09,2.26,1.04,0,">1 nonsynonymous","T15R P133Y",2
"lib2","SARS-CoV-2","TTTCACTCTGCAATCA",5,8.9,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","A33N A81P T140V",3
"lib2","SARS-CoV-2","TTTCACTTAATGCAAA",1,3.27,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","Y93P",1
"lib2","SARS-CoV-2","TTTCACTTCAAGCCGA",4,6.07,6,-4.84,2,3,1.28,0.02,">1 nonsynonymous","F12I A18S Q79P D97P T148I",5
"lib2","SARS-CoV-2","TTTCACTTCACGCCTC",2,32.75,10.83,-0.01,0.07,3,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCAGAAATCACTAG",10,157.17,10.68,-0.16,0.04,2.9,1.09,0,"1 nonsynonymous","Q144R",1
"lib2","SARS-CoV-2","TTTCAGAAGAAATAAA",12,318.22,10.41,-0.43,0.04,2.92,1.07,0,">1 nonsynonymous","K56C N120S K198V",3
"lib2","SARS-CoV-2","TTTCAGAGGAAACAAA",1,7.71,6,-4.84,2,1.5,1.27,0.07,">1 nonsynonymous","N30L D59N F99V G146S",4
"lib2","SARS-CoV-2","TTTCAGCGCACCTATA",1,11.22,9.9,-0.94,0.15,2.61,1,0.01,">1 nonsynonymous","T3Q V37H N64A Y121K L187W",5
"lib2","SARS-CoV-2","TTTCAGGAAAATAATT",5,73.6,10.03,-0.8,0.07,2.31,1.03,0,">1 nonsynonymous","V52Q D97S",2
"lib2","SARS-CoV-2","TTTCAGGAGATTAGCA",2,28.06,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G9W L38H E141M P161R",4
"lib2","SARS-CoV-2","TTTCAGGCATAACGCC",2,35.32,6,-4.84,2,1.5,1.18,0.04,">1 nonsynonymous","S43F V71S Y123R E141V K198C",5
"lib2","SARS-CoV-2","TTTCAGGCCGAGGAAA",4,31.68,6,-4.84,0.55,1.5,1.07,0.01,">1 nonsynonymous","A89R N107Y P149T",3
"lib2","SARS-CoV-2","TTTCAGGCGGACAATC",1,8.55,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","V37T Y143G C150S",3
"lib2","SARS-CoV-2","TTTCAGGTAAAAGTCA",4,43.2,6,-4.83,1.12,1.57,1.14,0.01,">1 nonsynonymous","S69M W106L V153H Q176M S200W",5
"lib2","SARS-CoV-2","TTTCAGGTTAGCAGTA",2,63.22,6,-4.84,2,3,1.14,0,">1 nonsynonymous","R25M V37F S41R K87Q G117R",5
"lib2","SARS-CoV-2","TTTCAGGTTGATGAAA",6,96.55,10.7,-0.14,0.04,2.95,1.04,0,">1 nonsynonymous","S53G Y91F",2
"lib2","SARS-CoV-2","TTTCAGTAAGCGCAAC",3,4.59,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L60R F99R A105Y Y165L E186D",5
"lib2","SARS-CoV-2","TTTCAGTAGTCACTAA",10,78.89,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","Y143G T170V T201N",3
"lib2","SARS-CoV-2","TTTCAGTATAACTTTT",4,36.88,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","I28V C61D V77R D97Y R127W",5
"lib2","SARS-CoV-2","TTTCAGTGGAAACGCA",10,151.38,10.33,-0.5,0.03,2.92,1.06,0,">1 nonsynonymous","D97R T170S L187A",3
"lib2","SARS-CoV-2","TTTCATAAAAAGTTCA",5,59.28,6,-4.84,2,3,1.11,0,">1 nonsynonymous","N157I N171R",2
"lib2","SARS-CoV-2","TTTCATAAAAATAAAT",1,3.22,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2R G83K D98Y Y119L G146L",5
"lib2","SARS-CoV-2","TTTCATAAAAGTAAGT",1,23.51,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","V20G T85D R127S D137R",4
"lib2","SARS-CoV-2","TTTCATAACACTTTCG",1,73.17,10.21,-0.62,0.06,2.83,1.02,0,">1 nonsynonymous","K56V D98L",2
"lib2","SARS-CoV-2","TTTCATAACGCTATAC",2,38.5,9.56,-1.28,0.14,2.03,1.06,0.01,">1 nonsynonymous","L60T G83I",2
"lib2","SARS-CoV-2","TTTCATAACTAAACCC",8,36.65,6,-4.84,2,1.5,1.1,0.04,">1 nonsynonymous","Y35G T63L F99V N130L T148F C158S",6
"lib2","SARS-CoV-2","TTTCATAACTTCTGTA",2,1.73,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S45P D90F Y119L",3
"lib2","SARS-CoV-2","TTTCATACCTAAAAAA",1,62.35,10.27,-0.56,0.06,2.84,1.08,0,"1 nonsynonymous","T15Y",1
"lib2","SARS-CoV-2","TTTCATAGCAGGTAAT",8,58.33,10.69,-0.15,0.09,2.96,1.07,0,"1 nonsynonymous","T201R",1
"lib2","SARS-CoV-2","TTTCATAGCGTATAGG",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5A V20G A105L D137T",4
"lib2","SARS-CoV-2","TTTCATATAATAAGCC",12,148.79,9.5,-1.34,0.02,1.94,1.04,0,">1 nonsynonymous","Y21L P54T",2
"lib2","SARS-CoV-2","TTTCATCAAACTCACG",3,38.1,10.15,-0.68,0.06,2.75,1.05,0,">1 nonsynonymous","T85W P149I",2
"lib2","SARS-CoV-2","TTTCATCACAGTCAAT",12,230.51,9.94,-0.9,0.07,2.37,1.01,0,">1 nonsynonymous","A42K C49M",2
"lib2","SARS-CoV-2","TTTCATCAGTGTACTG",6,94.16,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","V32L G83F Y123P",3
"lib2","SARS-CoV-2","TTTCATCCAGAACCCT",8,21.41,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","N92I I104Q S113R R136C Q168S",5
"lib2","SARS-CoV-2","TTTCATCGAAAACTAT",1,33.49,8.28,-2.56,0.21,1.71,1.11,0.01,">1 nonsynonymous","N40I N118V",2
"lib2","SARS-CoV-2","TTTCATCGAATCAATG",4,41.2,6,-4.84,2,3,1.09,0,">1 nonsynonymous","Y35R P82R N92Q E141G",4
"lib2","SARS-CoV-2","TTTCATCGCAGATACT",1,21.33,10.75,-0.09,0.05,2.94,1.03,0,">1 nonsynonymous","F12I A42M N120E",3
"lib2","SARS-CoV-2","TTTCATCTAAAACTCC",5,27.24,6,-4.84,2,1.5,1.13,0.04,">1 nonsynonymous","F12N W106D",2
"lib2","SARS-CoV-2","TTTCATGAAACTCTGT",5,30.22,8.76,-2.08,0.3,1.59,1.12,0.03,"1 nonsynonymous","D112S",1
"lib2","SARS-CoV-2","TTTCATGATGATTTGC",13,94.04,10.88,0.05,0.04,2.97,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCATGCAAAGAAAT",4,10.03,10.98,0.14,0.18,2.65,1.3,0.01,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","TTTCATGGCAAATTGA",3,31.48,10.83,-0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCATGTAACAAGAC",4,47.02,10.27,-0.57,0.08,2.75,1.1,0,">1 nonsynonymous","Y66M S184F",2
"lib2","SARS-CoV-2","TTTCATGTCTATTGGA",1,101.78,10.15,-0.69,0.04,2.76,1.02,0,">1 nonsynonymous","Y35P D98Q P197T",3
"lib2","SARS-CoV-2","TTTCATGTGGACTTTA",2,93,10.94,0.1,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCATTACATCGAGC",10,169.22,10.66,-0.17,0.02,2.92,1.07,0,"1 nonsynonymous","D59C",1
"lib2","SARS-CoV-2","TTTCATTACTGTAAAA",4,59.79,6,-4.84,1.97,1.5,1.14,0.01,">1 nonsynonymous","C6W K87I Y159N",3
"lib2","SARS-CoV-2","TTTCATTACTTACGTC",3,104.48,10.02,-0.82,0.09,2.57,1.08,0,">1 nonsynonymous","T15I N120L",2
"lib2","SARS-CoV-2","TTTCATTAGTTTCATT",10,144.17,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","F8H A22F S36A N118V S184H",5
"lib2","SARS-CoV-2","TTTCATTATTGCCTAC",1,10.59,6,-4.84,2,1.5,1.12,0.03,">1 nonsynonymous","P7L A22V N110T N118L E186S",5
"lib2","SARS-CoV-2","TTTCATTGGTGTGGAT",3,0.22,NA,NA,NA,NA,NA,NA,"stop","W106P N157* A190Y",3
"lib2","SARS-CoV-2","TTTCATTTAGGAAAAA",6,8.41,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33N F99G",2
"lib2","SARS-CoV-2","TTTCATTTTCCATTGC",6,79.53,9.4,-1.43,0.1,1.87,1.12,0.01,">1 nonsynonymous","N13C F47L G146S",3
"lib2","SARS-CoV-2","TTTCCAAAGTTAACCC",2,28.46,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T55D F99G",2
"lib2","SARS-CoV-2","TTTCCAAATTCGCAAA",4,19.59,8.12,-2.71,0.25,1.5,1.19,0.03,">1 nonsynonymous","Y35S D98I E141L",3
"lib2","SARS-CoV-2","TTTCCAACCAAAACTA",3,11.57,8.23,-2.6,0.17,2.2,1.06,0.01,">1 nonsynonymous","G74L G196E",2
"lib2","SARS-CoV-2","TTTCCAACCAAACTCG",4,0.03,NA,NA,NA,NA,NA,NA,"stop","F8* G51S F99Y G166S",4
"lib2","SARS-CoV-2","TTTCCAACTTATCCCA",2,27.51,10.87,0.03,0.05,2.91,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCCAAGAATAAATT",6,121.63,9.75,-1.09,0.02,2.97,1.05,0,">1 nonsynonymous","K26V L125T",2
"lib2","SARS-CoV-2","TTTCCAAGCTGAAAAT",4,44.93,8.62,-2.22,0.07,1.95,1.04,0,">1 nonsynonymous","F12W K56L A145T",3
"lib2","SARS-CoV-2","TTTCCAAGGAAAACTG",1,32.59,6,-4.84,2,1.5,1.19,0.04,">1 nonsynonymous","A81M Y93T N107K",3
"lib2","SARS-CoV-2","TTTCCAATGGTAATGT",8,181.24,10.1,-0.74,0.03,2.9,1.01,0,"1 nonsynonymous","C31W",1
"lib2","SARS-CoV-2","TTTCCAATTATAAATA",2,10.62,6,-4.84,2,1.5,1,0,">1 nonsynonymous","D68F G86T V103P",3
"lib2","SARS-CoV-2","TTTCCACGATTTTAAC",1,36.46,10.09,-0.75,0.09,2.69,1.01,0,"1 nonsynonymous","R127G",1
"lib2","SARS-CoV-2","TTTCCACTATATGACG",2,7.11,10.67,-0.16,0.11,2.7,1.33,0.01,"synonymous","",0
"lib2","SARS-CoV-2","TTTCCAGAATACGTGC",4,59.68,10.15,-0.68,0.04,2.88,1,0,">1 nonsynonymous","A33E N130A T148M",3
"lib2","SARS-CoV-2","TTTCCAGAATATTGTA",2,19.35,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","V11I S43C C61A P96R R127K H189L",6
"lib2","SARS-CoV-2","TTTCCAGACATCTATA",4,114.13,8.95,-1.89,0.08,2.84,1.08,0,"1 nonsynonymous","G146M",1
"lib2","SARS-CoV-2","TTTCCAGCAACACCGG",10,240.15,10.85,0.01,0.04,2.95,1.07,0,">1 nonsynonymous","Y39M S45G I104F",3
"lib2","SARS-CoV-2","TTTCCAGCGACTACTT",6,33.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57M F62P V77P Y119R",4
"lib2","SARS-CoV-2","TTTCCAGCTACAGTAG",3,0.63,NA,NA,NA,NA,NA,NA,"stop","D34K Y50* S139D",3
"lib2","SARS-CoV-2","TTTCCAGCTTAACACA",3,37.06,10.81,-0.03,0.03,2.93,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTCCAGGAACATAAC",7,123.02,10.19,-0.65,0.04,2.85,1.07,0,"1 nonsynonymous","S45L",1
"lib2","SARS-CoV-2","TTTCCAGGGATTAGAG",8,69.27,9.61,-1.22,0.09,2.06,1.07,0,">1 nonsynonymous","I2Y V37W N107G E154N G196R",5
"lib2","SARS-CoV-2","TTTCCAGTACACCCGG",1,5.53,10.61,-0.23,0.42,1.5,1,0.06,"1 nonsynonymous","V20L",1
"lib2","SARS-CoV-2","TTTCCAGTTTTGCATG",9,4.41,NA,NA,NA,NA,NA,NA,"stop","I2G N151*",2
"lib2","SARS-CoV-2","TTTCCATCAGTTTAGG",1,11.11,6,-4.84,2,1.5,1.06,0,">1 nonsynonymous","V52I G86F Y178L",3
"lib2","SARS-CoV-2","TTTCCATCATAGCTGA",5,26.95,8.47,-2.36,0.25,1.5,1,0.03,">1 nonsynonymous","N4V R179V",2
"lib2","SARS-CoV-2","TTTCCATCTTAAATCC",13,0.6,NA,NA,NA,NA,NA,NA,"stop","V52F L60* P82N",3
"lib2","SARS-CoV-2","TTTCCATTTCCAACAA",7,153.33,10.52,-0.32,0.04,2.96,1.04,0,"1 nonsynonymous","K87W",1
"lib2","SARS-CoV-2","TTTCCCAAAAATGAGC",2,11.85,6.81,-4.02,1.82,1.5,1.15,0.03,">1 nonsynonymous","L5W K48N I80S Y91Q G101P N157V",6
"lib2","SARS-CoV-2","TTTCCCAACATTCATG",5,28.38,8.18,-2.66,0.3,1.5,1.11,0.03,">1 nonsynonymous","F12Y S45D Q84G Y91I D97V",5
"lib2","SARS-CoV-2","TTTCCCAGGGCTCTAA",1,16.08,10.67,-0.16,0.09,2.84,1.16,0,"1 nonsynonymous","P7S",1
"lib2","SARS-CoV-2","TTTCCCATAACCCCAT",3,181.9,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y21T L38R Y123N",3
"lib2","SARS-CoV-2","TTTCCCATACCTAACG",8,30.89,9.98,-0.86,0.11,2.44,1.07,0.01,"1 nonsynonymous","A105I",1
"lib2","SARS-CoV-2","TTTCCCATATTCTACT",3,42.31,10.83,0,0.07,2.96,1.06,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTCCCATGTTCGCGA",3,50.05,10.7,-0.14,0.04,3,1.03,0,"1 nonsynonymous","K128L",1
"lib2","SARS-CoV-2","TTTCCCATTACAAGTT",1,0.51,NA,NA,NA,NA,NA,NA,"stop","A33T N40C T46* D68Q T201S",5
"lib2","SARS-CoV-2","TTTCCCCCACTGGTAC",4,37.64,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","L5F A14G R27F Q144L L162E G174K",6
"lib2","SARS-CoV-2","TTTCCCCCGAACATGG",1,48.47,10.91,0.08,0.05,2.98,1.02,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTCCCCCTTCAAACT",3,32.43,10.73,-0.1,0.1,2.79,1.06,0,"1 nonsynonymous","K128V",1
"lib2","SARS-CoV-2","TTTCCCCGAGTTTGAA",1,5.99,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","V20L D90R Y143L",3
"lib2","SARS-CoV-2","TTTCCCCGTAGACGTT",1,1.33,NA,NA,NA,NA,NA,NA,"stop","V37* N118Q",2
"lib2","SARS-CoV-2","TTTCCCGAGTTTTCCG",5,66.1,6,-4.84,1,1.5,1.19,0.01,">1 nonsynonymous","I2L G9K P133L G196V",4
"lib2","SARS-CoV-2","TTTCCCGATCACTGGC",2,68.57,10.82,-0.02,0.04,2.91,1.06,0,">1 nonsynonymous","Y39A N130V",2
"lib2","SARS-CoV-2","TTTCCCGATCGATGAT",4,7.61,6,-4.84,2,3,1.19,0.01,"1 nonsynonymous","R25L",1
"lib2","SARS-CoV-2","TTTCCCGCGTAAAAGA",2,16.67,8.18,-2.65,0.21,2.06,1.06,0.02,">1 nonsynonymous","A14T Y91N D97A Y119N",4
"lib2","SARS-CoV-2","TTTCCCGGGCGACTAT",9,128.16,10.68,-0.16,0.02,2.88,1.1,0,">1 nonsynonymous","L95I N151S",2
"lib2","SARS-CoV-2","TTTCCCGGTATCCACA",6,88.31,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Y93N N107D G146V",3
"lib2","SARS-CoV-2","TTTCCCTACATCCCTA",12,261.54,10.84,0.01,0.04,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCCCTCCTACTTTC",9,48.48,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","P54T T55I D59P P133N N151M P161L S200N",7
"lib2","SARS-CoV-2","TTTCCCTCTCCCTTGA",12,80.02,9.46,-1.37,0.07,1.9,1.11,0,">1 nonsynonymous","L60G S69T A81V",3
"lib2","SARS-CoV-2","TTTCCCTTAACGTATT",4,43.58,10.7,-0.14,0.04,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCCCTTACCTATCA",9,15.55,8.61,-2.22,0.24,1.68,1.32,0.02,">1 nonsynonymous","T63N S69G E154N T201D",4
"lib2","SARS-CoV-2","TTTCCCTTCGAGACCA",19,0.67,NA,NA,NA,NA,NA,NA,"stop","L5V L38* K56L P133L",4
"lib2","SARS-CoV-2","TTTCCGAAATACAAAT",1,0.88,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","W23L T55S K87N G117Y K199S",5
"lib2","SARS-CoV-2","TTTCCGAACATCCGTA",8,64.79,6,-4.84,2,1.5,1.21,0.04,">1 nonsynonymous","F70V P197K",2
"lib2","SARS-CoV-2","TTTCCGAGACATGACT",6,55.53,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","N13V A67N A89D V153S",4
"lib2","SARS-CoV-2","TTTCCGAGATACTGTT",6,23.32,8.89,-1.95,0.39,1.5,1,0.07,">1 nonsynonymous","Y66P I142V",2
"lib2","SARS-CoV-2","TTTCCGATGACGCGAT",3,2.23,NA,NA,NA,NA,NA,NA,"stop","K87* N107K G146K F167*",4
"lib2","SARS-CoV-2","TTTCCGCAAGCCCTCA",3,18.83,NA,NA,NA,NA,NA,0.15,">1 nonsynonymous","C102N S139C Q163K",3
"lib2","SARS-CoV-2","TTTCCGCTATATTAAG",9,104.95,10.68,-0.16,0.05,2.94,1.07,0,"1 nonsynonymous","N171S",1
"lib2","SARS-CoV-2","TTTCCGGCTCTAACCT",2,133.85,10.62,-0.21,0.03,2.87,1.09,0,"1 nonsynonymous","P191L",1
"lib2","SARS-CoV-2","TTTCCGGTGTCAAATG",7,107.6,9.19,-1.64,0.06,2.79,1.08,0,">1 nonsynonymous","L5W S29K G146Q",3
"lib2","SARS-CoV-2","TTTCCGGTTTATGTTT",4,41.03,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","G83L L162D",2
"lib2","SARS-CoV-2","TTTCCGTAGCTACCTA",6,32.46,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","Y35L Q84R V103M F167K V173R",5
"lib2","SARS-CoV-2","TTTCCGTTAAGATTGC",14,40.14,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","T3K S45I P96L",3
"lib2","SARS-CoV-2","TTTCCGTTAGAAATAG",4,39.55,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","K48L G172P",2
"lib2","SARS-CoV-2","TTTCCTAAAGACGGAT",8,0.63,NA,NA,NA,NA,NA,NA,"stop","C31* L38T A81H D97L N107R G117A N171S",7
"lib2","SARS-CoV-2","TTTCCTAACTTGGTTT",6,0.05,NA,NA,NA,NA,NA,NA,"stop","Y121W T201*",2
"lib2","SARS-CoV-2","TTTCCTAAGCGAAAAA",4,89.85,10.38,-0.46,0.05,2.88,1.05,0,"1 nonsynonymous","A22I",1
"lib2","SARS-CoV-2","TTTCCTAATCTCAGAG",7,65.38,10.83,0,0.05,2.9,1.11,0,"1 nonsynonymous","I2T",1
"lib2","SARS-CoV-2","TTTCCTAGCCCTACAA",8,3.62,NA,NA,NA,NA,NA,NA,"stop","A81* Y143M T201V",3
"lib2","SARS-CoV-2","TTTCCTAGTAATATGA",9,62.44,7.82,-3.02,0.2,1.7,1.09,0.01,">1 nonsynonymous","L60P G117C G174A",3
"lib2","SARS-CoV-2","TTTCCTAGTAGTAATT",18,378.53,10.18,-0.66,0.03,2.85,1.04,0,">1 nonsynonymous","F44M Y143H",2
"lib2","SARS-CoV-2","TTTCCTCACACCAAAT",15,148.26,9.51,-1.33,0.06,1.86,1.1,0,"1 nonsynonymous","L162Q",1
"lib2","SARS-CoV-2","TTTCCTCATCGAAAGC",8,110.38,6,-4.84,1.13,1.5,1.18,0.01,">1 nonsynonymous","F8S A81Y G86Y",3
"lib2","SARS-CoV-2","TTTCCTCTAATCTCTA",3,55.3,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","C6I N58K D68E K87H R124W T148H",6
"lib2","SARS-CoV-2","TTTCCTCTCAACATCA",12,113.89,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68M Y143D S147Y F156W",4
"lib2","SARS-CoV-2","TTTCCTCTTGAGTTCA",3,52.75,10.83,0,0.05,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCCTGGTATACCCA",3,18.48,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","V77C N92L Q176C",3
"lib2","SARS-CoV-2","TTTCCTTACTCCTACT",4,11.77,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","I104N S184D",2
"lib2","SARS-CoV-2","TTTCCTTCTAAGAGTG",6,112.94,10.25,-0.58,0.05,2.77,1.09,0,">1 nonsynonymous","G9A F44M E141R S200Y",4
"lib2","SARS-CoV-2","TTTCCTTGAAGGATTA",23,236.84,9.45,-1.39,0.05,1.71,1.09,0,">1 nonsynonymous","S43L W106G",2
"lib2","SARS-CoV-2","TTTCCTTGCATAAACC",4,31.06,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","L95Y Q144V",2
"lib2","SARS-CoV-2","TTTCCTTTGTATCAGA",6,94.81,10.19,-0.65,0.07,2.53,1.02,0,">1 nonsynonymous","T3D N24L",2
"lib2","SARS-CoV-2","TTTCGAACACAACAAA",1,0.78,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTTCGAACATCAGGGT",4,146.55,9.8,-1.04,0.03,2.93,1.04,0,">1 nonsynonymous","S41L K87N P149I",3
"lib2","SARS-CoV-2","TTTCGAACATTTACAA",11,207.22,10.62,-0.21,0.02,2.96,1.04,0,">1 nonsynonymous","L5G A33V S200P",3
"lib2","SARS-CoV-2","TTTCGAACTGAGTATA",4,22.62,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","L5P E10S L95R D112V R127N Q163V",6
"lib2","SARS-CoV-2","TTTCGAAGTCTAAAAA",7,18.62,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","G101H I138V",2
"lib2","SARS-CoV-2","TTTCGAAGTGATGCCG",1,59.93,8.69,-2.15,0.07,2.67,1.07,0,">1 nonsynonymous","T100H G146C",2
"lib2","SARS-CoV-2","TTTCGAATACAGAAAG",10,126.27,9.6,-1.23,0.07,2.25,1.12,0,">1 nonsynonymous","A14I I138S N151M",3
"lib2","SARS-CoV-2","TTTCGAATCGGTTTCT",3,61.46,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","S19K I80V P177S",3
"lib2","SARS-CoV-2","TTTCGACAAATGCAAA",3,83.39,10.95,0.12,0.06,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCGACACTGTTGGT",7,34.27,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","F70E D112P",2
"lib2","SARS-CoV-2","TTTCGACATGGCCTAC",10,22.44,8.12,-2.71,0.25,1.5,1.13,0.02,">1 nonsynonymous","E10T T15I T63Q P161A",4
"lib2","SARS-CoV-2","TTTCGACCAGGCCTAA",13,126.94,6,-4.84,2,3,1.16,0,">1 nonsynonymous","A14V W23Q P82V K114E R179G",5
"lib2","SARS-CoV-2","TTTCGACCTTCGGATT",6,2.4,NA,NA,NA,NA,NA,NA,"stop","T55V V182*",2
"lib2","SARS-CoV-2","TTTCGACTGGTAGGAT",1,27.7,6,-4.84,2,3,1.15,0,">1 nonsynonymous","V77N Y123S Y143G",3
"lib2","SARS-CoV-2","TTTCGAGAAAGAGACA",1,0.58,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4T G83I F99R W106V",4
"lib2","SARS-CoV-2","TTTCGAGAACAAGACA",5,73.82,9.79,-1.04,0.11,2.23,1.04,0.01,">1 nonsynonymous","F44A F134E S200Y",3
"lib2","SARS-CoV-2","TTTCGAGTCCAAGGAC",5,51.69,9.77,-1.06,0.09,1.99,1.05,0,">1 nonsynonymous","F12A V37T F44A T85S",4
"lib2","SARS-CoV-2","TTTCGATAAACCGTAT",2,37.03,9.26,-1.58,0.12,1.66,1.14,0.01,">1 nonsynonymous","F17T D59G",2
"lib2","SARS-CoV-2","TTTCGATACGATGTAG",2,23.83,8.78,-2.06,0.09,2.97,1.08,0,">1 nonsynonymous","V32S I104Y N157S S200T",4
"lib2","SARS-CoV-2","TTTCGCAGATAGAGTA",8,116.68,10.25,-0.58,0.05,2.95,1.07,0,"1 nonsynonymous","T170A",1
"lib2","SARS-CoV-2","TTTCGCATAAATACAA",2,11.3,9.74,-1.09,0.06,3,1.01,0,">1 nonsynonymous","G83W L125Q",2
"lib2","SARS-CoV-2","TTTCGCATACAAACCG",3,7.25,6.72,-4.11,0.22,3,1.01,0,">1 nonsynonymous","S53T D59S D68Q",3
"lib2","SARS-CoV-2","TTTCGCATTATCCATC",3,60.73,6,-4.84,1.48,1.5,1.23,0.01,">1 nonsynonymous","S36H I88Y",2
"lib2","SARS-CoV-2","TTTCGCCCCTAGCGCT",2,1.42,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D112L P161S",2
"lib2","SARS-CoV-2","TTTCGCCGATAAACAA",16,280.62,7.73,-3.1,0.21,1.5,1.08,0.01,">1 nonsynonymous","L5K W106S S164I",3
"lib2","SARS-CoV-2","TTTCGCGATACTCTAG",1,1.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Q144N P197G",2
"lib2","SARS-CoV-2","TTTCGCGGAGAACCAG",12,20.97,9.54,-1.29,0.23,1.5,1.08,0.03,">1 nonsynonymous","I104T R136W S164R",3
"lib2","SARS-CoV-2","TTTCGCGGTTTAAAGG",7,80.46,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N107L G146E",2
"lib2","SARS-CoV-2","TTTCGCGTAATACTCC",2,18.03,10.6,-0.24,0.07,2.93,1.05,0,"1 nonsynonymous","G155R",1
"lib2","SARS-CoV-2","TTTCGCTATTAAGTTG",4,58.43,6,-4.84,2,3,1.15,0,">1 nonsynonymous","T63Y D68W A81D K87R N120W",5
"lib2","SARS-CoV-2","TTTCGCTGTTTCGATT",6,28.28,10.89,0.05,0.12,2.88,1.09,0.01,"1 nonsynonymous","N130M",1
"lib2","SARS-CoV-2","TTTCGGACCCCTAACC",3,70.91,6.1,-4.74,0.99,1.5,1.22,0.01,">1 nonsynonymous","V37D C61I I80S T100D G166T",5
"lib2","SARS-CoV-2","TTTCGGAGCAAATTCA",4,40.84,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L60F F99S",2
"lib2","SARS-CoV-2","TTTCGGATTAGAACCA",2,16.88,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","G83F A89R",2
"lib2","SARS-CoV-2","TTTCGGATTCAAACAA",3,8.07,NA,NA,NA,NA,NA,0.31,">1 nonsynonymous","P7T C150K",2
"lib2","SARS-CoV-2","TTTCGGATTTGAACAA",13,106.87,8.39,-2.45,0.16,1.7,1.15,0.01,">1 nonsynonymous","I28K E154D",2
"lib2","SARS-CoV-2","TTTCGGCCCTCCTCCT",8,34.76,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","T15I S139F L162Q",3
"lib2","SARS-CoV-2","TTTCGGGCAATATACA",4,63.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","T3N Y93V K128H Y165D",4
"lib2","SARS-CoV-2","TTTCGTAAATATCGAC",1,6.55,11.05,0.21,0.19,2.94,1.07,0.01,"1 nonsynonymous","I2K",1
"lib2","SARS-CoV-2","TTTCGTAATCCAATAC",1,12.62,NA,NA,NA,NA,NA,NA,"stop","S41M C49* R136Q",3
"lib2","SARS-CoV-2","TTTCGTCCCAAGAATA",1,88.54,10.83,0,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCGTGAAACAACAC",3,27.46,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","A14V D98A V103M",3
"lib2","SARS-CoV-2","TTTCGTGCCGACCACT",1,6.62,10.69,-0.14,0.11,3,1.02,0,">1 nonsynonymous","G9Y N110S K128I",3
"lib2","SARS-CoV-2","TTTCGTGCGAATTTAA",4,13,NA,NA,NA,NA,NA,0.13,">1 nonsynonymous","F47N T55F K114I C150K F167L",5
"lib2","SARS-CoV-2","TTTCGTTAAAACCATG",2,10.35,NA,NA,NA,NA,NA,NA,"stop","C49G V71K D97F L131*",4
"lib2","SARS-CoV-2","TTTCGTTACTAGACAC",1,28.04,9.85,-0.98,0.11,2.1,1.13,0.01,">1 nonsynonymous","A42R T100G N130F",3
"lib2","SARS-CoV-2","TTTCGTTTGACAAGGA",17,0.1,NA,NA,NA,NA,NA,NA,"stop","L38T S147*",2
"lib2","SARS-CoV-2","TTTCGTTTGACTAGAC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","C102R K199*",2
"lib2","SARS-CoV-2","TTTCGTTTTACACAAA",3,29.48,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","Y35L D98K V103G T201V",4
"lib2","SARS-CoV-2","TTTCTAAAAAAGATCC",16,208.39,10.89,0.06,0.05,2.92,1.09,0,">1 nonsynonymous","L60Y P197E",2
"lib2","SARS-CoV-2","TTTCTAAAAAGCTAAT",3,66.07,10.05,-0.78,0.05,2.62,1.03,0,"1 nonsynonymous","Y91Q",1
"lib2","SARS-CoV-2","TTTCTAAACAACTAGC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","R73C N92R K128Q F156W V173S",5
"lib2","SARS-CoV-2","TTTCTAAACGTCCCAT",11,50.84,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","I2W W106I N151M V180P",4
"lib2","SARS-CoV-2","TTTCTAAAGAAACACC",4,691.96,6.13,-4.7,0.55,1.5,1.16,0.01,">1 nonsynonymous","Y35R G51W V115W L122S",4
"lib2","SARS-CoV-2","TTTCTAAATAGAAAGT",3,35.88,6,-4.84,2,1.5,1.14,0.03,">1 nonsynonymous","Y50P K87N Y93R",3
"lib2","SARS-CoV-2","TTTCTAACCTTAGTTC",2,0.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y E10Y N24T S45F",4
"lib2","SARS-CoV-2","TTTCTAATAGAGCCGC",10,97.71,6.11,-4.73,1.1,1.5,1.21,0.03,">1 nonsynonymous","R25I T55G N120E",3
"lib2","SARS-CoV-2","TTTCTAATATGAGACA",4,79.04,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","K87Y T170A P177V",3
"lib2","SARS-CoV-2","TTTCTAATCCTCTTTC",5,66.78,10.13,-0.71,0.09,2.74,1,0,">1 nonsynonymous","V20P V37R G83S",3
"lib2","SARS-CoV-2","TTTCTAATCTTCCATC",1,23.17,6,-4.84,2,3,1.22,0.01,">1 nonsynonymous","A14W D68L I142S V153S",4
"lib2","SARS-CoV-2","TTTCTAATTGCATTAA",2,12.39,9.8,-1.04,0.11,2.43,1.13,0.01,">1 nonsynonymous","G9W A81D V173I",3
"lib2","SARS-CoV-2","TTTCTAATTGGAATTT",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6E N13S K56L K94R T201S",5
"lib2","SARS-CoV-2","TTTCTACCCACTAGGT",8,46.15,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","R27W P149T Y165C",3
"lib2","SARS-CoV-2","TTTCTACGTCAGTCCG",2,115.46,10.8,-0.03,0.05,2.9,1.12,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTCTACGTGCGACTT",1,5.28,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33P S43F Y121K P149N",4
"lib2","SARS-CoV-2","TTTCTACGTTTCCAGA",5,79.94,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","S19M G51N D90G C150R",4
"lib2","SARS-CoV-2","TTTCTACTCTCAGTCA",4,90.59,10.59,-0.25,0.03,2.98,1.04,0,">1 nonsynonymous","I2H D90C T201K",3
"lib2","SARS-CoV-2","TTTCTAGAAGTACAAG",7,35.99,6,-4.84,2,1.5,1.27,0.03,">1 nonsynonymous","L5R F44T A81H F126V G146P",5
"lib2","SARS-CoV-2","TTTCTAGACAGACATG",7,66.09,8.27,-2.57,0.04,2.55,1.09,0,">1 nonsynonymous","L5K G117C Q144P",3
"lib2","SARS-CoV-2","TTTCTAGAGTAAACAA",3,20.49,NA,NA,NA,NA,NA,0.21,">1 nonsynonymous","T55D G101E T201Q",3
"lib2","SARS-CoV-2","TTTCTATAGAAAGTGG",21,283.72,10.85,0.01,0.05,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCTATCTGCACTAA",10,177.69,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C61H G74M Y119N F126S",4
"lib2","SARS-CoV-2","TTTCTATGACTCCGCA",1,12.19,7.9,-2.93,0.28,1.5,1.09,0.03,">1 nonsynonymous","V77T Y119W T140L A192F",4
"lib2","SARS-CoV-2","TTTCTATGCTACCGAA",4,24.59,6,-4.84,2,3,1.17,0.01,">1 nonsynonymous","F12V I28T F167I",3
"lib2","SARS-CoV-2","TTTCTATTTACTACGT",4,66.4,6,-4.84,1.74,1.5,1.15,0.01,">1 nonsynonymous","L5E W23K L57V",3
"lib2","SARS-CoV-2","TTTCTCAAAGCTAGAA",6,29.24,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L5I A14F A18L F70R F134L",5
"lib2","SARS-CoV-2","TTTCTCAACTACGATA",25,206.09,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16H I72R",2
"lib2","SARS-CoV-2","TTTCTCAACTGTTGAT",2,21.6,10.84,0.01,0.08,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCTCAAGGAACAAT",4,19.48,8.29,-2.55,0.17,1.75,1.06,0.01,"1 nonsynonymous","D112F",1
"lib2","SARS-CoV-2","TTTCTCAATCCTTCCA",1,87.15,10.64,-0.19,0.04,2.89,1.04,0,"1 nonsynonymous","E141P",1
"lib2","SARS-CoV-2","TTTCTCAGGAGTACCA",10,361.69,10.23,-0.61,0.03,2.95,1.03,0,">1 nonsynonymous","I2V K87Y K114M F160P T201K",5
"lib2","SARS-CoV-2","TTTCTCCAGAAAGTAA",10,56.32,7.89,-2.94,0.26,1.5,1.01,0.03,">1 nonsynonymous","S43C D112A",2
"lib2","SARS-CoV-2","TTTCTCCCACCTGTTA",1,27.63,6,-4.84,0.94,1.5,1.12,0.01,">1 nonsynonymous","E10H T148S P177E",3
"lib2","SARS-CoV-2","TTTCTCGAAGGTAACG",2,5.69,6,-4.84,2,1.5,1.31,0.06,">1 nonsynonymous","V20K S41E K56D Q84K Y119S G166A T201M",7
"lib2","SARS-CoV-2","TTTCTCGAGAAATGAA",1,9.23,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","C49H K56S Y178Q",3
"lib2","SARS-CoV-2","TTTCTCGTTGAATAAA",2,18.7,6,-4.84,2,3,1.27,0.01,">1 nonsynonymous","W23T C61H I104M S113L",4
"lib2","SARS-CoV-2","TTTCTCTACAGTAAGA",1,33.46,10.73,-0.11,0.06,2.97,1.04,0,"1 nonsynonymous","K128Y",1
"lib2","SARS-CoV-2","TTTCTGAAACATAATC",3,24.87,6,-4.84,2,1.5,1.18,0.02,">1 nonsynonymous","C6I Y50Q D59F N109V Y165R N171I",6
"lib2","SARS-CoV-2","TTTCTGAAATAGATAT",2,14.03,10.1,-0.74,0.06,2.97,1,0,">1 nonsynonymous","N120D G174P",2
"lib2","SARS-CoV-2","TTTCTGAAATTCATGA",14,141.99,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","C61S S113P L162S",3
"lib2","SARS-CoV-2","TTTCTGACCTAGTTTT",4,129.3,10.84,0,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCTGATCGAATGCG",14,35.72,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","T15S C49D R127P",3
"lib2","SARS-CoV-2","TTTCTGATGCCTTTTT",2,29.16,10.72,-0.12,0.1,2.98,1,0,">1 nonsynonymous","S43R K56M",2
"lib2","SARS-CoV-2","TTTCTGATGGCCCTAC",10,46.54,6,-4.84,1.1,1.5,1.14,0.01,">1 nonsynonymous","N92M P191T",2
"lib2","SARS-CoV-2","TTTCTGCACTCATATG",7,129.77,10.93,0.09,0.07,2.91,1.09,0,">1 nonsynonymous","S43T T201V",2
"lib2","SARS-CoV-2","TTTCTGGAAAGGAGAG",2,4.44,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L60T",1
"lib2","SARS-CoV-2","TTTCTGGAACTAGACG",1,6.87,8.67,-2.16,0.23,1.86,1,0.03,">1 nonsynonymous","W23F Q84R A105V",3
"lib2","SARS-CoV-2","TTTCTGGAAGGAATGA",10,142.6,10.86,0.03,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCTGTAATAAACAA",4,62.84,10.81,-0.02,0.05,3,1.03,0,"1 nonsynonymous","Y39S",1
"lib2","SARS-CoV-2","TTTCTGTCTACGTGAA",4,26.06,10.32,-0.52,0.11,2.98,1.03,0,">1 nonsynonymous","I2K N13F",2
"lib2","SARS-CoV-2","TTTCTGTGTTTACCCT",11,170.53,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","G9S R127D N157I",3
"lib2","SARS-CoV-2","TTTCTGTTAAGGCTTA",13,103.43,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6G F44C N151S Y159S",4
"lib2","SARS-CoV-2","TTTCTGTTTTTGATGG",1,1.35,NA,NA,NA,NA,NA,NA,"stop","R16G K26* G51A T100S V181R",5
"lib2","SARS-CoV-2","TTTCTTATTAAAAAAT",5,21.89,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","F12V T100M S113I K199L",4
"lib2","SARS-CoV-2","TTTCTTATTACTTAAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F167P L183P",2
"lib2","SARS-CoV-2","TTTCTTATTGATTACA",4,7.9,7.78,-3.05,0.45,1.5,1.03,0.05,">1 nonsynonymous","D137W F160M",2
"lib2","SARS-CoV-2","TTTCTTCAAATAATAG",4,34.78,10.51,-0.32,0.05,3,1.01,0,"1 nonsynonymous","D90T",1
"lib2","SARS-CoV-2","TTTCTTCAGTTGCTCC",5,2.47,NA,NA,NA,NA,NA,NA,"stop","D68N D90L F134*",3
"lib2","SARS-CoV-2","TTTCTTCCACCAATCA",2,120.3,10.74,-0.1,0.04,3,1.01,0,">1 nonsynonymous","I2T N120F",2
"lib2","SARS-CoV-2","TTTCTTCCCACTAAGC",5,25.37,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","F44V W106P Y119Q K198G",4
"lib2","SARS-CoV-2","TTTCTTCCTGTGCAGC",4,0.69,NA,NA,NA,NA,NA,NA,"stop","I28D T148V P177*",3
"lib2","SARS-CoV-2","TTTCTTCCTTAAGCAA",4,55.05,10.71,-0.13,0.07,2.83,1.2,0,">1 nonsynonymous","N40S Y143F",2
"lib2","SARS-CoV-2","TTTCTTCTATCCCGTA",16,261.62,9.85,-0.99,0.07,2.3,1.05,0,">1 nonsynonymous","L38W K128L L187C",3
"lib2","SARS-CoV-2","TTTCTTCTCAACTTTA",2,49.83,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G86V T100F P133S",3
"lib2","SARS-CoV-2","TTTCTTGAGAAGGAGT",10,72.93,10.87,0.03,0.05,2.86,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTCTTGGTTCCTAAC",6,129.39,9.42,-1.41,0.04,2.17,1.05,0,">1 nonsynonymous","Y35R G116F",2
"lib2","SARS-CoV-2","TTTCTTTAAAGTTGGA",6,12.93,NA,NA,NA,NA,NA,0.23,">1 nonsynonymous","V32E D112F N118T N130L",4
"lib2","SARS-CoV-2","TTTGAAAAAAATGTTA",1,23.63,8.8,-2.04,0.16,1.5,1.07,0.01,">1 nonsynonymous","A22T S29P L60V P149C",4
"lib2","SARS-CoV-2","TTTGAAAAAGTAAAAG",3,36,10.13,-0.7,0.06,2.84,1.1,0,">1 nonsynonymous","C6Y A42S",2
"lib2","SARS-CoV-2","TTTGAAAAGTCATATT",3,1.09,NA,NA,NA,NA,NA,NA,"stop","T55M V103W D112K S129* T201A",5
"lib2","SARS-CoV-2","TTTGAAAATACAACAA",2,46.67,10.53,-0.3,0.09,2.88,1.04,0,">1 nonsynonymous","F17W I80L",2
"lib2","SARS-CoV-2","TTTGAAAATTAAAACT",18,364.96,10.64,-0.2,0.03,2.92,1.08,0,">1 nonsynonymous","A33G R78S",2
"lib2","SARS-CoV-2","TTTGAAACAATCCACC",2,19.33,10.75,-0.09,0.08,2.88,1.11,0,">1 nonsynonymous","F47V T100F",2
"lib2","SARS-CoV-2","TTTGAAACACCTTTTT",9,232.85,10.69,-0.15,0.02,2.95,1.05,0,">1 nonsynonymous","N40K T46W",2
"lib2","SARS-CoV-2","TTTGAAAGTTGTGTAC",4,13.81,6,-4.84,2,1.5,1.08,0.01,">1 nonsynonymous","T3S C102K",2
"lib2","SARS-CoV-2","TTTGAAATAAATACAT",2,21.84,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","Y35T V77M L131R",3
"lib2","SARS-CoV-2","TTTGAAATAAGTAACT",5,61.48,10.59,-0.25,0.05,2.89,1.13,0,">1 nonsynonymous","V37W K56A T85K D98S S129M",5
"lib2","SARS-CoV-2","TTTGAAATCCAAGCAT",5,130.92,10.17,-0.66,0.04,2.89,1.02,0,"1 nonsynonymous","Q144Y",1
"lib2","SARS-CoV-2","TTTGAAATTACACCCT",10,45.53,8.05,-2.79,0.19,1.5,1.16,0.01,">1 nonsynonymous","I104H P133W",2
"lib2","SARS-CoV-2","TTTGAAATTTAAAATA",1,1.53,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37R T63G",2
"lib2","SARS-CoV-2","TTTGAACAAAAATAGG",1,2.25,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","G152L",1
"lib2","SARS-CoV-2","TTTGAACAGACAAGAA",2,12.64,6.38,-4.46,0.85,3,1.02,0.01,">1 nonsynonymous","N1V S41F I88D F126S",4
"lib2","SARS-CoV-2","TTTGAACATCAAAAAA",6,47.91,10.29,-0.55,0.08,2.64,1,0,"1 nonsynonymous","S139Y",1
"lib2","SARS-CoV-2","TTTGAACCACGAGATC",2,16.93,10.84,0,0.06,3,1,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTGAACCATGCAACA",1,21.88,10.42,-0.42,0.09,2.87,1.05,0,">1 nonsynonymous","I2F S69A Q168F",3
"lib2","SARS-CoV-2","TTTGAACCGAGCGGCT",2,12.84,6,-4.84,2,3,1.25,0.01,">1 nonsynonymous","V52I N107L P133S E141D",4
"lib2","SARS-CoV-2","TTTGAACTATATCTAA",8,126.44,8.34,-2.49,0.24,1.5,1.1,0.02,">1 nonsynonymous","G86H P133S",2
"lib2","SARS-CoV-2","TTTGAACTCAATCATA",14,132.26,9.09,-1.75,0.19,1.5,1.08,0.01,">1 nonsynonymous","F12L K94V L188P",3
"lib2","SARS-CoV-2","TTTGAACTGAGACTAA",2,13.41,6,-4.84,2,1.5,1.07,0.02,">1 nonsynonymous","P54T Y91G D97H V115C",4
"lib2","SARS-CoV-2","TTTGAACTGTACACTA",6,72.86,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","S36W A67D D90K F99L P169R Q176K",6
"lib2","SARS-CoV-2","TTTGAAGAAACAAAAC",17,149.02,10.32,-0.51,0.07,2.61,1.07,0,">1 nonsynonymous","Y35E Q163Y",2
"lib2","SARS-CoV-2","TTTGAAGAACTGCAGG",9,232.77,10.38,-0.45,0.04,2.91,1.07,0,">1 nonsynonymous","S41D F156I",2
"lib2","SARS-CoV-2","TTTGAAGCCCCCATGT",2,16.19,NA,NA,NA,NA,NA,0.4,">1 nonsynonymous","G9L Y50L L95A A105R T201N",5
"lib2","SARS-CoV-2","TTTGAAGCGGGAATGT",4,7.15,NA,NA,NA,NA,NA,0.37,">1 nonsynonymous","C6E G101R N107V P133R S200W",5
"lib2","SARS-CoV-2","TTTGAAGCGTAGGGTC",5,17.94,10.72,-0.12,0.15,2.84,1.07,0.01,">1 nonsynonymous","A42Y P54I T100K E141C Q163V",5
"lib2","SARS-CoV-2","TTTGAAGGTAATAATT",8,184.41,10.82,-0.02,0.05,2.9,1.1,0,">1 nonsynonymous","R16W L122R",2
"lib2","SARS-CoV-2","TTTGAAGTACCTAGAA",1,23.13,9,-1.84,0.22,1.89,1.1,0.02,">1 nonsynonymous","G9W V52Y T140H Y178S",4
"lib2","SARS-CoV-2","TTTGAAGTAGTATTAC",2,0.14,NA,NA,NA,NA,NA,NA,"stop","N40S I72* P149H L183N",4
"lib2","SARS-CoV-2","TTTGAAGTATTCGATG",3,45.78,6,-4.84,2,1.5,1.22,0.03,">1 nonsynonymous","T15S C31M F44W C61E R127E",5
"lib2","SARS-CoV-2","TTTGAAGTCAAGGTAA",1,48.77,10.8,-0.04,0.07,2.78,1.2,0,"1 nonsynonymous","V37R",1
"lib2","SARS-CoV-2","TTTGAATAAATACTGA",5,66.52,10.81,-0.03,0.08,2.87,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGAATAAATAGGCA",8,86.59,10.28,-0.56,0.04,2.9,1.03,0,">1 nonsynonymous","P7V S43F T201R",3
"lib2","SARS-CoV-2","TTTGAATAAGGATTAG",2,16.78,10.48,-0.36,0.25,2.54,1.02,0.04,"1 nonsynonymous","N151M",1
"lib2","SARS-CoV-2","TTTGAATACGGATTAC",1,14.29,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","D90Y T100P",2
"lib2","SARS-CoV-2","TTTGAATCACGATTAC",12,285.5,10.84,0,0.03,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGAATCCATCCTAG",5,19.55,10.72,-0.11,0.03,3,1.03,0,">1 nonsynonymous","P7A K198L",2
"lib2","SARS-CoV-2","TTTGAATCTATTTGAT",3,136.84,10.22,-0.62,0.06,2.82,1.08,0,">1 nonsynonymous","T46D N58M",2
"lib2","SARS-CoV-2","TTTGAATTACGGCATC",5,103.03,9.81,-1.03,0.09,2.32,1.01,0,">1 nonsynonymous","D34A L60Q V173W",3
"lib2","SARS-CoV-2","TTTGAATTGCGACTAT",11,115.84,10.47,-0.37,0.05,2.78,1.06,0,"1 nonsynonymous","Y91C",1
"lib2","SARS-CoV-2","TTTGAATTGTTAATAT",1,5.38,6,-4.84,2,1.5,1.19,0.05,">1 nonsynonymous","V11G N92S N151T R179S",4
"lib2","SARS-CoV-2","TTTGAATTTCTATCCA",6,44.95,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","L60V L131E",2
"lib2","SARS-CoV-2","TTTGACAAAGATTCTG",4,46.8,6,-4.84,2,1.5,1.25,0.03,">1 nonsynonymous","Y50I N58T L95V V182L",4
"lib2","SARS-CoV-2","TTTGACAACCTAAAAA",3,1.67,NA,NA,NA,NA,NA,NA,"stop","C6A N40V T55L F62C D98V P133R T201*",7
"lib2","SARS-CoV-2","TTTGACAAGTTATCCT",5,32.25,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","K94T Y143W G174Q E186Y",4
"lib2","SARS-CoV-2","TTTGACAATCATCCGT",14,246.81,10.76,-0.08,0.02,2.97,1.04,0,">1 nonsynonymous","V37P D59S T201Q",3
"lib2","SARS-CoV-2","TTTGACACAATAGGTA",1,32.98,9.42,-1.42,0.09,1.74,1.08,0,">1 nonsynonymous","A14F D98K",2
"lib2","SARS-CoV-2","TTTGACACACACACCC",2,79.06,10.62,-0.22,0.05,2.84,1.06,0,">1 nonsynonymous","F62W D98W",2
"lib2","SARS-CoV-2","TTTGACACTACCGCGG",16,235.39,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","C150D P161G",2
"lib2","SARS-CoV-2","TTTGACAGCGATCTAA",2,90.87,10.41,-0.42,0.06,2.81,1.11,0,"1 nonsynonymous","N13R",1
"lib2","SARS-CoV-2","TTTGACATACGCAGGC",2,58.34,8.3,-2.54,0.12,2.66,1.03,0.01,">1 nonsynonymous","V37L W106F N157E",3
"lib2","SARS-CoV-2","TTTGACATCCATGTCA",1,28.07,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","Y35P S113W N120S",3
"lib2","SARS-CoV-2","TTTGACATTGGAACGG",4,69.16,10.73,-0.1,0.06,2.91,1.09,0,"1 nonsynonymous","N120S",1
"lib2","SARS-CoV-2","TTTGACCCCTTGCCAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T85P I142N S200*",3
"lib2","SARS-CoV-2","TTTGACCCTACAAGAA",8,81.21,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","D75R L162S",2
"lib2","SARS-CoV-2","TTTGACCGCAGAGAAA",3,41.04,6,-4.84,2,3,1.18,0,">1 nonsynonymous","V32L L57R L95S V103C",4
"lib2","SARS-CoV-2","TTTGACCTAACAAAAT",10,129.07,10.86,0.02,0.07,2.95,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGACCTAGAACTTT",3,14.94,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","F134N V180F",2
"lib2","SARS-CoV-2","TTTGACGAAAGTAAAT",2,13.83,10.79,-0.04,0.08,2.74,1.28,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGACGAAGTATGTA",10,38.19,6,-4.84,2,1.5,1.28,0.03,">1 nonsynonymous","F70I I104K",2
"lib2","SARS-CoV-2","TTTGACGAGGGGATAG",9,1.95,NA,NA,NA,NA,NA,NA,"stop","S41N A42S Y119K K128P P149V Q176*",6
"lib2","SARS-CoV-2","TTTGACGCGGGTTTTG",5,59.62,10.2,-0.64,0.03,2.86,1,0,"1 nonsynonymous","A14L",1
"lib2","SARS-CoV-2","TTTGACGCTAACAAAA",2,66.31,6,-4.84,2,2.04,1.27,0.02,">1 nonsynonymous","Y21K A67C K198Y",3
"lib2","SARS-CoV-2","TTTGACGCTGTAGTAG",7,43.76,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","C49D C61W",2
"lib2","SARS-CoV-2","TTTGACGGATGGCAAT",19,64.9,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","F99S Y165F",2
"lib2","SARS-CoV-2","TTTGACTAACTGGACT",18,2.3,NA,NA,NA,NA,NA,NA,"stop","C6I P96Y E135K P149* T170I P177Q",6
"lib2","SARS-CoV-2","TTTGACTAAGTTAGAA",6,47.07,10.73,-0.11,0.06,2.91,1.11,0,"1 nonsynonymous","S129Y",1
"lib2","SARS-CoV-2","TTTGACTACTTTAAAA",3,0.29,NA,NA,NA,NA,NA,NA,"stop","D97V S139* G155L P169S",4
"lib2","SARS-CoV-2","TTTGACTATAGTAAAA",9,161.01,10.66,-0.18,0.03,2.9,1.09,0,"1 nonsynonymous","C61W",1
"lib2","SARS-CoV-2","TTTGACTCACGAATCA",5,15.58,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","N30S V37N D90S Y119V R124P A145T Y165R P197A",8
"lib2","SARS-CoV-2","TTTGACTCACGTATAA",8,16.86,10.85,0.02,0.05,2.94,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGACTCCAACACTC",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T140S S200N",2
"lib2","SARS-CoV-2","TTTGACTCCCAGAAAA",12,41.51,9.74,-1.1,0.12,1.89,1.15,0.01,">1 nonsynonymous","I28S S43I P149L",3
"lib2","SARS-CoV-2","TTTGACTTAATGACTA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V37L Y165W",2
"lib2","SARS-CoV-2","TTTGACTTCAAAAGCT",1,5.1,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","D90L R136E",2
"lib2","SARS-CoV-2","TTTGAGAAACAGTACC",10,55.7,8.47,-2.36,0.12,1.67,1.11,0.01,">1 nonsynonymous","T100E Y121T",2
"lib2","SARS-CoV-2","TTTGAGAACCCTCCGA",7,20.06,9.19,-1.65,0.19,1.5,1.05,0.03,">1 nonsynonymous","R27V L57V W106T T201K",4
"lib2","SARS-CoV-2","TTTGAGAATTAAACCC",1,26.62,10.4,-0.43,0.05,2.88,1.15,0,">1 nonsynonymous","S41A L60K",2
"lib2","SARS-CoV-2","TTTGAGACTCAGTAGT",7,135.73,10.08,-0.75,0.03,2.88,1.03,0,">1 nonsynonymous","D59H D98A Y121L",3
"lib2","SARS-CoV-2","TTTGAGACTTTAGGCC",1,1.73,NA,NA,NA,NA,NA,NA,"stop","Y35S A42E S129* G174S E186L",5
"lib2","SARS-CoV-2","TTTGAGAGCCAAGACG",1,22.89,10.18,-0.65,0.12,2.31,1.04,0.01,">1 nonsynonymous","W106S T201Q",2
"lib2","SARS-CoV-2","TTTGAGAGCTCTCAAT",4,0.99,NA,NA,NA,NA,NA,NA,"stop","N1G A33G P149* V153Y",4
"lib2","SARS-CoV-2","TTTGAGCCTTGAGCCT",7,0.07,NA,NA,NA,NA,NA,NA,"stop","V37Q V115*",2
"lib2","SARS-CoV-2","TTTGAGCTCACCGCTA",8,52.69,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","D68R G86S Y119L T201D",4
"lib2","SARS-CoV-2","TTTGAGGAACTGCTCC",4,16.75,9.05,-1.79,0.12,1.95,1,0,">1 nonsynonymous","V32Q Y123Q I138G",3
"lib2","SARS-CoV-2","TTTGAGGAGTGGCATA",3,0.02,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1A G86T C158R",3
"lib2","SARS-CoV-2","TTTGAGGATGCTGAAC",6,53.34,10.57,-0.27,0.02,2.98,1.02,0,"1 nonsynonymous","R136H",1
"lib2","SARS-CoV-2","TTTGAGGGATAATTAC",1,42.93,10.87,0.03,0.17,2.7,1.16,0.01,"1 nonsynonymous","T140N",1
"lib2","SARS-CoV-2","TTTGAGGTACAGCGCT",8,143.54,10.44,-0.39,0.04,2.92,1.08,0,">1 nonsynonymous","N4T C61Y N64M",3
"lib2","SARS-CoV-2","TTTGAGTAAATCTCAC",1,22.36,6,-4.84,2,3,1.12,0.01,">1 nonsynonymous","C49D T55N V103L R179H",4
"lib2","SARS-CoV-2","TTTGAGTAACCTTATT",6,134.84,10.61,-0.22,0.06,2.89,1.1,0,"1 nonsynonymous","S41Y",1
"lib2","SARS-CoV-2","TTTGAGTGAACTCAGG",2,0,NA,NA,NA,NA,NA,NA,"stop","P96E Y119* T201*",3
"lib2","SARS-CoV-2","TTTGAGTTAATCAAGG",5,33.94,10.73,-0.11,0.1,2.66,1.12,0,">1 nonsynonymous","R136Q F160K V173L L188K",4
"lib2","SARS-CoV-2","TTTGATAACATGAATA",10,58.9,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","N58I I104M L122S K132F P161G L183F",6
"lib2","SARS-CoV-2","TTTGATAACCATACTA",6,43.89,6,-4.84,0.9,1.5,1.11,0.01,">1 nonsynonymous","F99K E154G",2
"lib2","SARS-CoV-2","TTTGATAAGATAAACG",8,92.79,8.73,-2.1,0.12,1.53,1.07,0.01,">1 nonsynonymous","A18K Y91N N107S",3
"lib2","SARS-CoV-2","TTTGATACGAGGGCGT",6,1.63,NA,NA,NA,NA,NA,NA,"stop","S19A N64I Y91E Y143* N151W",5
"lib2","SARS-CoV-2","TTTGATACTGACGAAT",3,0.9,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H N110I",2
"lib2","SARS-CoV-2","TTTGATAGTTTTAATT",2,43.09,10.68,-0.16,0.05,2.88,1.1,0,"1 nonsynonymous","N4Y",1
"lib2","SARS-CoV-2","TTTGATCAATACTCTA",3,66.1,7.88,-2.95,0.11,1.59,1.05,0,">1 nonsynonymous","F44L N64R P133C F156S",4
"lib2","SARS-CoV-2","TTTGATCACGGTATAA",10,110.58,9.6,-1.24,0.04,2.94,1.08,0,">1 nonsynonymous","Y119K T148F",2
"lib2","SARS-CoV-2","TTTGATCCAAAGCAAA",6,45.95,6.75,-4.09,0.43,1.5,1.15,0.03,">1 nonsynonymous","A14T S45H S69G",3
"lib2","SARS-CoV-2","TTTGATCCAACAGCGT",4,102.24,10.6,-0.23,0.04,2.99,1,0,">1 nonsynonymous","D59G D90S",2
"lib2","SARS-CoV-2","TTTGATCCCATAGCAG",1,18.94,10.85,0.01,0.07,2.99,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGATCCGACTACAA",11,174.94,9.42,-1.42,0.07,1.9,1.05,0,">1 nonsynonymous","V37M G86A",2
"lib2","SARS-CoV-2","TTTGATCCTCCAAAAT",2,15.23,8.33,-2.51,0.29,1.5,1,0.05,">1 nonsynonymous","A14N S45Y C61P F167Y",4
"lib2","SARS-CoV-2","TTTGATCGTCGCCACG",9,127.69,6,-4.84,2,1.5,1.14,0,">1 nonsynonymous","G9T N40W K94N N120L R136Y",5
"lib2","SARS-CoV-2","TTTGATGAGATGAATG",3,49.81,6,-4.84,2,1.5,1.3,0.04,">1 nonsynonymous","N24W K94H Y143N N151S V194I",5
"lib2","SARS-CoV-2","TTTGATGATCAATTGT",2,2.06,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","L95S",1
"lib2","SARS-CoV-2","TTTGATGCTCTTTGCA",4,79.61,10.46,-0.37,0.04,2.87,1.09,0,"1 nonsynonymous","A14D",1
"lib2","SARS-CoV-2","TTTGATGGTACCTTCG",2,55.74,10.09,-0.75,0.07,2.64,1.07,0,">1 nonsynonymous","S43L F99L",2
"lib2","SARS-CoV-2","TTTGATTATTCATACA",3,130.95,9.62,-1.22,0.04,2.94,1.07,0,">1 nonsynonymous","D97L Y119H",2
"lib2","SARS-CoV-2","TTTGATTCTTCCTTCT",10,69.77,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R124V E135W",2
"lib2","SARS-CoV-2","TTTGATTGAAGTTAGT",7,65.27,10.35,-0.48,0.06,2.89,1.05,0,"1 nonsynonymous","Y35P",1
"lib2","SARS-CoV-2","TTTGATTGCCATCCAA",4,0,NA,NA,NA,NA,NA,NA,"stop","S41L K56* A89V",3
"lib2","SARS-CoV-2","TTTGATTGCGTAGTAT",10,349.56,9.42,-1.42,0.03,2.91,1.09,0,">1 nonsynonymous","P54V Y119P",2
"lib2","SARS-CoV-2","TTTGATTGGCGTATAC",7,47.09,9.28,-1.56,0.13,1.72,1.14,0.01,">1 nonsynonymous","S41H P82S",2
"lib2","SARS-CoV-2","TTTGATTTGCATGCGG",8,19.62,6.75,-4.09,0.27,2.07,1.11,0.01,">1 nonsynonymous","S19V K94Q W106M N130A",4
"lib2","SARS-CoV-2","TTTGCAAAAAATATAA",2,1.45,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N1L L60S G117T G155L",4
"lib2","SARS-CoV-2","TTTGCAACGAGCACAA",1,0,NA,NA,NA,NA,NA,NA,"stop","N1M L57* Y91L P149R",4
"lib2","SARS-CoV-2","TTTGCAACGCCAAAAA",1,14.38,9.36,-1.47,0.11,2.44,1,0.01,">1 nonsynonymous","R27E A89P E141K G155A",4
"lib2","SARS-CoV-2","TTTGCAAGCAGACGGC",1,23.77,10.29,-0.54,0.37,1.81,1.12,0.05,"1 nonsynonymous","D68W",1
"lib2","SARS-CoV-2","TTTGCAAGGCATAACC",1,0.37,NA,NA,NA,NA,NA,NA,"stop","F160A K199*",2
"lib2","SARS-CoV-2","TTTGCAATCATACGTG",3,159.26,10.83,-0.01,0.04,2.92,1.07,0,"1 nonsynonymous","N64Q",1
"lib2","SARS-CoV-2","TTTGCACAAGTTAACG",4,1.04,NA,NA,NA,NA,NA,NA,"stop","L5G L57R Y93*",3
"lib2","SARS-CoV-2","TTTGCACATAGTCCCT",1,34.16,10.35,-0.49,0.07,2.92,1.04,0,"1 nonsynonymous","L57V",1
"lib2","SARS-CoV-2","TTTGCACATGCTATGC",6,109.07,6,-4.84,0.52,1.5,1.12,0.01,">1 nonsynonymous","L5C S43M C61Y T100L W106Y Y143L N151E Y178R",8
"lib2","SARS-CoV-2","TTTGCACTAAAGTAAC",1,16.34,6.33,-4.51,0.6,1.5,1.08,0.02,">1 nonsynonymous","T55A S113M G152W",3
"lib2","SARS-CoV-2","TTTGCAGACTAACGTA",3,98.99,10.62,-0.21,0.03,2.89,1.1,0,"1 nonsynonymous","I142T",1
"lib2","SARS-CoV-2","TTTGCATAATGTGTCC",12,159.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","K114T F167S",2
"lib2","SARS-CoV-2","TTTGCATACGAGGGTT",10,131.03,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","L38Y I72T P161R",3
"lib2","SARS-CoV-2","TTTGCATATGTACCTA",3,31.97,10.83,0,0.06,2.99,1,0,"1 nonsynonymous","R27S",1
"lib2","SARS-CoV-2","TTTGCATCGCATGCCT",1,21.72,8.81,-2.03,0.09,2.94,1.11,0,"1 nonsynonymous","L125E",1
"lib2","SARS-CoV-2","TTTGCATCTAGCTTAA",2,45.54,8.53,-2.31,0.26,1.5,1.05,0.03,">1 nonsynonymous","F8K N107L",2
"lib2","SARS-CoV-2","TTTGCATGAGTCAGTA",6,45.87,6,-4.84,2,1.5,1.22,0.01,">1 nonsynonymous","L38V C61S F99K G152K",4
"lib2","SARS-CoV-2","TTTGCATGGTGGAACA",3,0,NA,NA,NA,NA,NA,NA,"stop","E76*",1
"lib2","SARS-CoV-2","TTTGCCAATAATCTAT",2,29.62,10.56,-0.27,0.07,2.89,1.09,0,">1 nonsynonymous","T55D L60D S164Q K199W",4
"lib2","SARS-CoV-2","TTTGCCAATGACTTTA",1,4.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N4G P96C G101H Y121V G174R",5
"lib2","SARS-CoV-2","TTTGCCAATTGAACAG",7,46.83,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","Y35S A81P E141G",3
"lib2","SARS-CoV-2","TTTGCCACCAATCTGA",1,18.79,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","C31S Y159S S200L",3
"lib2","SARS-CoV-2","TTTGCCACGTTCCCAA",1,14.52,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","T55A I88T F99Y D112T",4
"lib2","SARS-CoV-2","TTTGCCCAACTCCTCA",1,11.3,6,-4.84,2,1.5,1.16,0.07,">1 nonsynonymous","A14L V71R D90E",3
"lib2","SARS-CoV-2","TTTGCCCCCAGGGAAA",3,0.39,NA,NA,NA,NA,NA,NA,"stop","V11M A81* P96R",3
"lib2","SARS-CoV-2","TTTGCCCCTTACTCAT",3,11.41,6,-4.84,2,1.5,1.24,0.03,">1 nonsynonymous","D90E A105L",2
"lib2","SARS-CoV-2","TTTGCCCGCTGATATC",4,0.5,NA,NA,NA,NA,NA,NA,"stop","Y123* P133I S164L",3
"lib2","SARS-CoV-2","TTTGCCCTTAATGGCC",8,31.37,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C6M W23P N58I G83R",4
"lib2","SARS-CoV-2","TTTGCCGAATAATTAG",1,31.09,9.84,-0.99,0.16,2.34,1.37,0.01,">1 nonsynonymous","F134L S147I",2
"lib2","SARS-CoV-2","TTTGCCGACCCAACAC",2,1.89,NA,NA,NA,NA,NA,NA,"stop","Y39D S45F N120* V194L",4
"lib2","SARS-CoV-2","TTTGCCTGCTTGCCTG",21,8.05,NA,NA,NA,NA,NA,NA,"stop","F12S N107* Y121F",3
"lib2","SARS-CoV-2","TTTGCGAAAAATACAC",5,46.52,10.27,-0.57,0.05,2.89,1,0,">1 nonsynonymous","K26Q V173L V182I V194Y",4
"lib2","SARS-CoV-2","TTTGCGAATAATGCTG",8,82.87,9.33,-1.51,0.09,1.99,1.08,0,"1 nonsynonymous","F185R",1
"lib2","SARS-CoV-2","TTTGCGACAAAATCGA",7,89.15,10.76,-0.07,0.05,2.96,1.07,0,"1 nonsynonymous","G152D",1
"lib2","SARS-CoV-2","TTTGCGCCTCGGACCT",5,3.56,NA,NA,NA,NA,NA,NA,"stop","P82W G86S V115H K128V F134* T170P V173G S200N",8
"lib2","SARS-CoV-2","TTTGCGCGAACAACTT",1,2.29,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L95E K128I G146L",3
"lib2","SARS-CoV-2","TTTGCGCGGAACTTCG",7,117.36,6,-4.84,2,3,1.2,0,">1 nonsynonymous","F8G F47D L95A Y119D T201L",5
"lib2","SARS-CoV-2","TTTGCGCTTGCTAATG",4,21.61,10.27,-0.56,0.15,2.62,1.02,0.01,">1 nonsynonymous","E10R G152H",2
"lib2","SARS-CoV-2","TTTGCGGTATTGGTAA",19,371.97,8.36,-2.47,0.13,2.79,1.07,0.01,">1 nonsynonymous","L5T N157Y",2
"lib2","SARS-CoV-2","TTTGCGGTGGATCCAT",9,189.39,10.83,0,0.05,2.92,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGCGTACGGCAACA",2,103.78,10.72,-0.12,0.06,3,1.01,0,">1 nonsynonymous","I2S K132F",2
"lib2","SARS-CoV-2","TTTGCTAATCAACACG",6,53.58,7.91,-2.93,0.19,1.5,1.19,0.01,">1 nonsynonymous","I2V G86L",2
"lib2","SARS-CoV-2","TTTGCTAATCTAGCCC",17,212.55,10.73,-0.11,0.04,2.94,1.05,0,"1 nonsynonymous","D75R",1
"lib2","SARS-CoV-2","TTTGCTAGACTCACTT",3,13.21,6,-4.84,2,1.5,1.18,0.03,">1 nonsynonymous","A42F S108W G155V",3
"lib2","SARS-CoV-2","TTTGCTATAAAATGGC",7,2.72,NA,NA,NA,NA,NA,NA,"stop","P7N A18S A105L C158V G174*",5
"lib2","SARS-CoV-2","TTTGCTATCACACAAG",23,322.12,10.61,-0.22,0.03,2.97,1.05,0,">1 nonsynonymous","G9S T55N F156W T201D",4
"lib2","SARS-CoV-2","TTTGCTCACAAGACTT",7,7.12,NA,NA,NA,NA,NA,NA,"stop","T100*",1
"lib2","SARS-CoV-2","TTTGCTCTCAGGAAAC",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","P133L",1
"lib2","SARS-CoV-2","TTTGCTCTTTTTTTGT",3,16.67,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","Y35A T63M A105N N120V S164Y",5
"lib2","SARS-CoV-2","TTTGCTGAAAACATAC",3,24.8,6,-4.84,2,1.5,1.32,0.04,">1 nonsynonymous","N13V F126C Y178V",3
"lib2","SARS-CoV-2","TTTGCTGACGGGACAG",2,60.84,10.24,-0.6,0.04,2.83,1.01,0,">1 nonsynonymous","V32H L60N Q144G",3
"lib2","SARS-CoV-2","TTTGCTGACTACTTGC",11,79.2,6,-4.84,1.7,1.5,1.18,0.03,">1 nonsynonymous","V65K D97H K114L S139H",4
"lib2","SARS-CoV-2","TTTGCTGAGATATCCT",7,295.24,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","Y21E Y178D",2
"lib2","SARS-CoV-2","TTTGCTGATTTCGTTA",1,9.66,7.22,-3.61,0.29,1.5,1,0.03,">1 nonsynonymous","S41Y D90Y N107V S164N S200L",5
"lib2","SARS-CoV-2","TTTGCTGTGTCTACAT",9,83.82,10.35,-0.49,0.05,2.95,1.05,0,">1 nonsynonymous","A14H V37I",2
"lib2","SARS-CoV-2","TTTGCTTACGAACAGC",4,28.2,10.74,-0.09,0.04,2.96,1.04,0,"1 nonsynonymous","F160V",1
"lib2","SARS-CoV-2","TTTGCTTAGATATTTA",1,13.28,9.72,-1.12,0.06,2.87,1,0,">1 nonsynonymous","K56F A145I",2
"lib2","SARS-CoV-2","TTTGCTTTGTAACTCT",1,2.8,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3M A33E S45D Y91I",4
"lib2","SARS-CoV-2","TTTGGAAAAAAGTGCA",5,27.8,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","D98C G172W Y178R",3
"lib2","SARS-CoV-2","TTTGGAAATAAGCTTT",2,30.78,NA,NA,NA,NA,NA,0.09,">1 nonsynonymous","G9A A22L W106P K114A",4
"lib2","SARS-CoV-2","TTTGGAAATTCTTTTA",12,148.82,10.14,-0.69,0.03,2.9,1.06,0,">1 nonsynonymous","Y66W G155C",2
"lib2","SARS-CoV-2","TTTGGACATAATTCCC",11,119.37,6,-4.84,2,1.5,1.33,0.04,">1 nonsynonymous","R25I G152Q",2
"lib2","SARS-CoV-2","TTTGGACCATTAGCGA",2,23.74,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","N40M P161I",2
"lib2","SARS-CoV-2","TTTGGACGCTTCTTAT",2,36.51,8.78,-2.05,0.16,1.65,1.07,0.01,">1 nonsynonymous","C6L K56L N120C",3
"lib2","SARS-CoV-2","TTTGGACGTCACATGA",2,0.3,NA,NA,NA,NA,NA,NA,"stop","S69W V77M C102D F160T Y175*",5
"lib2","SARS-CoV-2","TTTGGACTACTAGCAG",1,133.73,10.6,-0.23,0.02,2.91,1.1,0,">1 nonsynonymous","D90R I138E",2
"lib2","SARS-CoV-2","TTTGGACTTCAACCCA",5,0.17,NA,NA,NA,NA,NA,NA,"stop","C49*",1
"lib2","SARS-CoV-2","TTTGGACTTGAAGTTG",2,0.12,NA,NA,NA,NA,NA,NA,"stop","A18R Y93* E135A Y159R",4
"lib2","SARS-CoV-2","TTTGGAGAAGCGAGAA",2,27.64,10.49,-0.34,0.03,2.92,1.05,0,">1 nonsynonymous","L5W G51R E141I",3
"lib2","SARS-CoV-2","TTTGGAGATACCGACG",4,60.86,8.8,-2.04,0.12,1.5,1.1,0.01,">1 nonsynonymous","F12R N64Y",2
"lib2","SARS-CoV-2","TTTGGATAAGTATACG",2,9.35,6,-4.84,2,1.5,1.34,0.05,">1 nonsynonymous","C49S D137G H189P",3
"lib2","SARS-CoV-2","TTTGGATAATGTTAAA",9,60.51,6.03,-4.8,1.45,1.5,1.19,0.04,">1 nonsynonymous","R16G V181S",2
"lib2","SARS-CoV-2","TTTGGATAATTAAATT",1,13.09,10.65,-0.19,0.09,2.95,1,0,">1 nonsynonymous","Y123R T140L",2
"lib2","SARS-CoV-2","TTTGGATACCGACGTT",13,46.4,6.26,-4.58,0.7,1.5,1.27,0.03,">1 nonsynonymous","D68E D90E",2
"lib2","SARS-CoV-2","TTTGGATTACTCAAAG",1,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","K56L",1
"lib2","SARS-CoV-2","TTTGGCAACGAATACC",10,42.42,6,-4.84,1.18,1.5,1.19,0.01,">1 nonsynonymous","F12S F44Y N120L P149T V173G S200M",6
"lib2","SARS-CoV-2","TTTGGCAACTATCGGG",7,119.78,9.04,-1.79,0.04,2.96,1.04,0,">1 nonsynonymous","G116A G166L T201M",3
"lib2","SARS-CoV-2","TTTGGCAGCAGATAGC",11,3.28,NA,NA,NA,NA,NA,NA,"stop","S36E L60*",2
"lib2","SARS-CoV-2","TTTGGCATTCAGGGGA",8,0.66,NA,NA,NA,NA,NA,NA,"stop","P7T K56V T100* G116L V181Y",5
"lib2","SARS-CoV-2","TTTGGCCACTTAAAAT",10,158.07,10.75,-0.09,0.06,2.9,1.11,0,"1 nonsynonymous","C61R",1
"lib2","SARS-CoV-2","TTTGGCCCCGTGGATT",11,126.96,6.17,-4.67,0.58,1.5,1.17,0.01,">1 nonsynonymous","I2L G9P Y50N K56L",4
"lib2","SARS-CoV-2","TTTGGCTACAGTAGAC",1,2.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y121L R127M",2
"lib2","SARS-CoV-2","TTTGGCTCCAATGGCG",8,3.06,NA,NA,NA,NA,NA,NA,"stop","S36* P161T",2
"lib2","SARS-CoV-2","TTTGGCTGTGAAAGAC",10,31.19,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","W106A G172V S184C",3
"lib2","SARS-CoV-2","TTTGGCTTAATAGGAT",6,28.17,6,-4.84,2,3,1.2,0.01,">1 nonsynonymous","L122C R179W",2
"lib2","SARS-CoV-2","TTTGGGAACAGACAAA",5,195.89,10.86,0.02,0.05,2.94,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGGGACCCTATCCG",5,154.92,6,-4.84,2,1.5,1.24,0.02,">1 nonsynonymous","S29I K56F G117S T148Y A190L",5
"lib2","SARS-CoV-2","TTTGGGCAACACCATA",2,57.72,10.48,-0.36,0.04,2.87,1.14,0,">1 nonsynonymous","I138E L183M",2
"lib2","SARS-CoV-2","TTTGGGCACCTCCGTG",3,69.02,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","V11S K26L Y35W G86I P96L",5
"lib2","SARS-CoV-2","TTTGGGCCCACAAATT",2,9.1,6.05,-4.79,0.71,3,1.09,0.01,">1 nonsynonymous","D68K W106K R136H T148E H189N",5
"lib2","SARS-CoV-2","TTTGGGCGGGTTTACC",7,1.04,NA,NA,NA,NA,NA,NA,"stop","V20G S41* A105P",3
"lib2","SARS-CoV-2","TTTGGGGAACCCATAC",1,15.72,10.73,-0.1,0.1,3,1.04,0,"1 nonsynonymous","G152T",1
"lib2","SARS-CoV-2","TTTGGGGCTGAACCGC",4,22.2,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","W23R S45A K87G K132G",4
"lib2","SARS-CoV-2","TTTGGGGTTCAGACGT",5,2.88,NA,NA,NA,NA,NA,NA,"stop","N13M D68* N120L L183R",4
"lib2","SARS-CoV-2","TTTGGGTTTATGATAA",3,23.62,7.65,-3.19,0.17,2.6,1.16,0.01,">1 nonsynonymous","N120D C158R",2
"lib2","SARS-CoV-2","TTTGGTAAGCTTGACT",1,24.1,10.27,-0.56,0.06,2.9,1.04,0,">1 nonsynonymous","N4S G9P L57I",3
"lib2","SARS-CoV-2","TTTGGTAATAAGTCCC",4,66.54,10.81,-0.02,0.03,2.96,1.06,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGGTACTCTGCCCC",9,51.62,8.55,-2.28,0.28,1.5,1.05,0.03,">1 nonsynonymous","F12R L57V",2
"lib2","SARS-CoV-2","TTTGGTAGTGACCTAA",4,30.69,8.53,-2.3,0.18,2.07,1.07,0.01,">1 nonsynonymous","T46F G146V",2
"lib2","SARS-CoV-2","TTTGGTATCTTTACAC",3,50.66,7.11,-3.72,0.14,2.23,1.1,0,">1 nonsynonymous","S29F S43L F62C Y175E",4
"lib2","SARS-CoV-2","TTTGGTCATCGAGGGT",1,0.7,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E141I S200P",2
"lib2","SARS-CoV-2","TTTGGTGAAGGCAACA",7,87.07,10.81,-0.03,0.03,2.96,1.07,0,"1 nonsynonymous","T3K",1
"lib2","SARS-CoV-2","TTTGGTGATATCCGGT",2,1.46,NA,NA,NA,NA,NA,NA,"stop","E10* A81V A105Y",3
"lib2","SARS-CoV-2","TTTGGTGGCACCAATG",4,76.42,8.25,-2.58,0.1,2.58,1.02,0,">1 nonsynonymous","A33Y G166E",2
"lib2","SARS-CoV-2","TTTGGTTACAAAAGAT",8,31.91,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","I88F S113N",2
"lib2","SARS-CoV-2","TTTGGTTATATTATAT",2,4.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F62R G155A",2
"lib2","SARS-CoV-2","TTTGGTTCAACAAATC",26,145.68,9.54,-1.3,0.08,2.56,1.07,0,"1 nonsynonymous","P161Q",1
"lib2","SARS-CoV-2","TTTGGTTCGACTTTGG",6,43.02,10.74,-0.1,0.08,2.81,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGGTTTCCGTAAGG",6,96.05,10.78,-0.06,0.05,2.86,1.16,0,"1 nonsynonymous","S43A",1
"lib2","SARS-CoV-2","TTTGTAAAAGGCGGAT",6,11.91,10.79,-0.04,0.07,2.95,1.09,0,"1 nonsynonymous","K199H",1
"lib2","SARS-CoV-2","TTTGTAACAAAATCCG",1,24.58,6,-4.84,2,1.5,1.23,0.04,">1 nonsynonymous","D90L Y123D G174V",3
"lib2","SARS-CoV-2","TTTGTAACTATAATAA",1,25.18,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","S29T N92P",2
"lib2","SARS-CoV-2","TTTGTAATCCAATCCA",4,0.63,NA,NA,NA,NA,NA,NA,"stop","K94*",1
"lib2","SARS-CoV-2","TTTGTACATGCTCTGG",9,2.74,NA,NA,NA,NA,NA,NA,"stop","W23M T201*",2
"lib2","SARS-CoV-2","TTTGTACATTCTGGAA",1,24.74,10.76,-0.08,0.06,2.83,1.18,0,"1 nonsynonymous","Y35F",1
"lib2","SARS-CoV-2","TTTGTACCCACCACGT",3,27.78,10.7,-0.13,0.05,2.9,1.12,0,">1 nonsynonymous","Q168R K199M",2
"lib2","SARS-CoV-2","TTTGTACGCATGGAAG",3,43.04,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","I88G G146N",2
"lib2","SARS-CoV-2","TTTGTACGTAGAGAAC",2,49.06,10.68,-0.15,0.05,2.85,1.16,0,"1 nonsynonymous","N64G",1
"lib2","SARS-CoV-2","TTTGTACTACAATGAG",10,81.6,6,-4.84,2,2.09,1.22,0.01,">1 nonsynonymous","C49G T148R E154V",3
"lib2","SARS-CoV-2","TTTGTACTACTAGAAG",7,142.66,10.85,0.01,0.04,2.99,1.03,0,"1 nonsynonymous","T100L",1
"lib2","SARS-CoV-2","TTTGTAGACATACTTT",8,158.11,10.87,0.04,0.05,2.95,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGTATAATAACAAT",4,28.07,10.87,0.03,0.05,2.97,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGTATGGCAGCCAA",12,23.96,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","N13E T55G Y121G",3
"lib2","SARS-CoV-2","TTTGTATTAGGACAAA",7,0.25,NA,NA,NA,NA,NA,NA,"stop","N58* A81V V103F V181R T201Y",5
"lib2","SARS-CoV-2","TTTGTATTGGCAAAAT",2,50.17,10.9,0.06,0.07,2.88,1.14,0,"1 nonsynonymous","P197A",1
"lib2","SARS-CoV-2","TTTGTATTTTGATATA",5,48.2,6,-4.84,2,1.5,1.25,0.05,">1 nonsynonymous","K26R T63M F99N L162V",4
"lib2","SARS-CoV-2","TTTGTCACATTTTTAG",2,26.08,6,-4.84,2,3,1.06,0,">1 nonsynonymous","P149F G172R",2
"lib2","SARS-CoV-2","TTTGTCACCTGATTTA",1,37.95,9.91,-0.93,0.09,2.3,1,0,">1 nonsynonymous","S45I P149N",2
"lib2","SARS-CoV-2","TTTGTCACGCGGACGT",9,94.35,6,-4.84,2,1.5,1.21,0.02,">1 nonsynonymous","D68C P96R T201Q",3
"lib2","SARS-CoV-2","TTTGTCACGTTAAAAA",4,73.77,6.56,-4.27,0.31,1.5,1.2,0.01,">1 nonsynonymous","G9V C61P G86R L95S L111K F134S R136I",7
"lib2","SARS-CoV-2","TTTGTCCAAACCCAAG",4,37.81,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","R16S T100L I142P G146P",4
"lib2","SARS-CoV-2","TTTGTCCATGAAATAT",1,13.25,NA,NA,NA,NA,NA,0.08,"1 nonsynonymous","I88H",1
"lib2","SARS-CoV-2","TTTGTCCCACTATACA",7,32.87,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","E10D L38P S45Y A81V P96N I138R",6
"lib2","SARS-CoV-2","TTTGTCCCAGAACGAT",1,41.2,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","L5K C61S F62G N120D P161F",5
"lib2","SARS-CoV-2","TTTGTCCGAATAGAGA",12,355.03,6,-4.84,2,1.5,1.17,0,">1 nonsynonymous","I2W Y50W N109C G172K",4
"lib2","SARS-CoV-2","TTTGTCCGGAACGGTT",9,76.59,8.54,-2.3,0.08,2.52,1.09,0,">1 nonsynonymous","I2S C61S I72L P149L Q168C",5
"lib2","SARS-CoV-2","TTTGTCGATAAACATT",1,26.53,10.96,0.13,0.07,2.85,1.14,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTGTCGCGGACTATC",3,18.91,6,-4.84,2,1.5,1.11,0.02,">1 nonsynonymous","D34L D98A F167L",3
"lib2","SARS-CoV-2","TTTGTCTAAATTATCT",14,175.26,6,-4.84,2,1.5,1.23,0.01,">1 nonsynonymous","S19A Y119V R136P",3
"lib2","SARS-CoV-2","TTTGTCTATCGAGGCG",1,29.57,10.51,-0.33,0.05,2.94,1.08,0,"1 nonsynonymous","P169L",1
"lib2","SARS-CoV-2","TTTGTCTCCAAGTCAA",1,23.78,6,-4.84,2,1.5,1.1,0.02,">1 nonsynonymous","W23E T55D Y121D K199L",4
"lib2","SARS-CoV-2","TTTGTCTTGCATTAAT",7,111.76,10.81,-0.03,0.05,2.92,1.07,0,">1 nonsynonymous","K26T A42V",2
"lib2","SARS-CoV-2","TTTGTGAACTATTCCA",1,34.01,10.72,-0.11,0.04,2.99,1.03,0,">1 nonsynonymous","D97R G152S T201G",3
"lib2","SARS-CoV-2","TTTGTGATAAAAAAAA",5,179.61,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","V65D A105Y Y175S",3
"lib2","SARS-CoV-2","TTTGTGATAACAATTC",4,17.4,9.54,-1.3,0.16,2.57,1.05,0.01,">1 nonsynonymous","T85Y I104Y V173P",3
"lib2","SARS-CoV-2","TTTGTGATAACAGATG",4,30.39,6,-4.84,2,1.5,1.29,0.05,">1 nonsynonymous","F70A D90S G172Q T201P",4
"lib2","SARS-CoV-2","TTTGTGATAATATAAA",5,32.35,8.43,-2.41,0.17,1.5,1.11,0.01,">1 nonsynonymous","Y91S F134N E141A S200M",4
"lib2","SARS-CoV-2","TTTGTGATCATGTATG",4,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10A Y50S I80D",3
"lib2","SARS-CoV-2","TTTGTGATGAATGTAA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41W V52N S69W D90R V103* G166S S200L",7
"lib2","SARS-CoV-2","TTTGTGCAAAACGTAA",1,13.69,10.95,0.11,0.05,2.98,1.01,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTGTGCAACTATTTC",5,46.74,6.58,-4.26,0.69,1.7,1.26,0.05,">1 nonsynonymous","C150Y Q168P",2
"lib2","SARS-CoV-2","TTTGTGCCCTTATAAC",2,0,NA,NA,NA,NA,NA,NA,"stop","Y66N N107A I138A F156* F167L",5
"lib2","SARS-CoV-2","TTTGTGCCGAAACACG",4,47.2,9.78,-1.06,0.06,2.94,1.06,0,"1 nonsynonymous","T170G",1
"lib2","SARS-CoV-2","TTTGTGCGATTATCTA",4,11,6,-4.84,2,1.5,1.12,0.02,">1 nonsynonymous","L57G D112N G155K",3
"lib2","SARS-CoV-2","TTTGTGCGCCCAACCA",3,40.17,6,-4.84,2,1.5,1.21,0.01,">1 nonsynonymous","V11W I72D G152V",3
"lib2","SARS-CoV-2","TTTGTGGAGTCTCATG",11,357.68,9.62,-1.22,0.03,2.84,1.06,0,">1 nonsynonymous","N109G G116S",2
"lib2","SARS-CoV-2","TTTGTGTTGCCTCAAC",9,0.84,NA,NA,NA,NA,NA,NA,"stop","N4R K26T V77R N130F S200*",5
"lib2","SARS-CoV-2","TTTGTGTTTAACTTTG",6,80.6,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","S45A F134S N157A Y165A",4
"lib2","SARS-CoV-2","TTTGTTAAAGCAAGTG",8,55.23,7.27,-3.56,0.11,1.5,1.11,0,">1 nonsynonymous","G86Y T170S T201S",3
"lib2","SARS-CoV-2","TTTGTTAAGCATAGAA",1,93.68,10.07,-0.76,0.02,2.99,1.01,0,">1 nonsynonymous","K26M N120K G174F T201M",4
"lib2","SARS-CoV-2","TTTGTTACTAAGCCCC",7,77.51,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","Y21L P96G N107I",3
"lib2","SARS-CoV-2","TTTGTTAGAAAAAAAA",1,38.36,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","N40Y Q79V W106Y L122V",4
"lib2","SARS-CoV-2","TTTGTTAGAAAGCCCG",1,11.04,6.25,-4.59,0.42,2.32,1.1,0.01,">1 nonsynonymous","Y50L G83C S164T N171S",4
"lib2","SARS-CoV-2","TTTGTTATGTGAAAAC",7,56,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","I80V A81E D90I R124I",4
"lib2","SARS-CoV-2","TTTGTTCACCGGTGTG",1,19.17,9.75,-1.09,0.19,2.01,1.06,0.01,">1 nonsynonymous","I2E F8N V153L",3
"lib2","SARS-CoV-2","TTTGTTCCCGAACTCT",2,15.47,6,-4.84,2,3,1.08,0.01,">1 nonsynonymous","A14W C61G G83L D97L G117P Y159L Y165W",7
"lib2","SARS-CoV-2","TTTGTTCGAATTGTCG",1,3.56,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L5R S43V A81C K94W D98N P191S K199R",7
"lib2","SARS-CoV-2","TTTGTTGAACATTTAG",3,101.38,10.38,-0.45,0.07,2.78,1.07,0,">1 nonsynonymous","F134T A192Q",2
"lib2","SARS-CoV-2","TTTGTTGAAGCCACCG",2,8.74,11.26,0.42,0.14,2.95,1,0,">1 nonsynonymous","Y35W L60R",2
"lib2","SARS-CoV-2","TTTGTTGGGAAGACTA",2,32.87,9.86,-0.98,0.05,2.64,1,0,">1 nonsynonymous","Y35E Q84K",2
"lib2","SARS-CoV-2","TTTGTTTTAACAAAGA",1,76.36,9.5,-1.33,0.12,1.87,1.09,0.01,">1 nonsynonymous","V11H R16L K56T",3
"lib2","SARS-CoV-2","TTTTAAAAATCACTAT",2,0,NA,NA,NA,NA,NA,NA,"stop","E10K F47* D59N T201L",4
"lib2","SARS-CoV-2","TTTTAAAAATTATAAA",5,44.42,6,-4.84,2,3,1.22,0,">1 nonsynonymous","G86Y N118C E135I",3
"lib2","SARS-CoV-2","TTTTAAAACATTAGAA",10,46.54,8.8,-2.03,0.05,2.08,1.04,0,">1 nonsynonymous","V37C A67S K114D",3
"lib2","SARS-CoV-2","TTTTAAAACTTCTACC",8,211.66,9.16,-1.68,0.04,2.9,1.09,0,">1 nonsynonymous","N157A V173M",2
"lib2","SARS-CoV-2","TTTTAAAAGTGAAGTA",1,28.07,9.65,-1.18,0.17,2.72,1.14,0.01,">1 nonsynonymous","N120K S129R I142S",3
"lib2","SARS-CoV-2","TTTTAAAAGTGAATCG",4,41.01,9.6,-1.23,0.06,2.8,1.11,0,">1 nonsynonymous","N151I T170K",2
"lib2","SARS-CoV-2","TTTTAAAATATTACGG",8,121.65,9.08,-1.76,0.07,2.04,1.09,0,">1 nonsynonymous","I28L S43N Y50M T63G",4
"lib2","SARS-CoV-2","TTTTAAAATCATTACT",6,110,10.76,-0.08,0.06,2.9,1.12,0,"1 nonsynonymous","T3E",1
"lib2","SARS-CoV-2","TTTTAAACAATAAAAT",3,27.09,8.7,-2.14,0.38,1.5,1,0.08,">1 nonsynonymous","F12V S19A S45I V173Q",4
"lib2","SARS-CoV-2","TTTTAAACCTAGGTAG",4,38.39,11,0.17,0.05,2.9,1.08,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","TTTTAAACCTCTGGCT",4,82.39,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","F62I Y119T F167G",3
"lib2","SARS-CoV-2","TTTTAAACTCCCCAGT",5,177.62,10.81,-0.02,0.04,2.95,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTAAAGATGAATAA",13,141.28,7.78,-3.06,0.06,1.89,1.08,0,">1 nonsynonymous","S36K N64E A105I T170E",4
"lib2","SARS-CoV-2","TTTTAAAGATTAGCTG",2,16.92,6,-4.84,2,1.5,1.27,0.05,">1 nonsynonymous","C61H A89E G101L L122E I138V",5
"lib2","SARS-CoV-2","TTTTAAAGCCGAGTTA",3,9.33,10.76,-0.08,0.09,2.84,1.19,0.01,">1 nonsynonymous","I2T Q84S",2
"lib2","SARS-CoV-2","TTTTAAAGTGGTGGGG",8,65.64,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","E10W W106R Y121K P133D Q163R",5
"lib2","SARS-CoV-2","TTTTAAATACAACTAT",3,52.82,10.22,-0.61,0.1,2.64,1.09,0,">1 nonsynonymous","T100M K132P S184Y T201L",4
"lib2","SARS-CoV-2","TTTTAAATGTTAGAAT",2,41.83,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","G9P C31T K56W L60N D98M L122G I138S T170M",8
"lib2","SARS-CoV-2","TTTTAACAAATGACGC",5,3.29,NA,NA,NA,NA,NA,NA,"stop","F44P V77* N120C P197N",4
"lib2","SARS-CoV-2","TTTTAACAATTCAACT",3,21.43,10.66,-0.18,0.07,2.95,1.06,0,"1 nonsynonymous","D90M",1
"lib2","SARS-CoV-2","TTTTAACACACAACCA",8,118.9,6,-4.84,2,1.5,1.17,0.01,">1 nonsynonymous","R16I I28Q S36K N118Y L131D",5
"lib2","SARS-CoV-2","TTTTAACACCCCCCAA",4,18.55,10.79,-0.05,0.05,2.83,1.19,0,"1 nonsynonymous","N64S",1
"lib2","SARS-CoV-2","TTTTAACACTCCCACA",10,186.76,10.3,-0.53,0.04,2.91,1.07,0,"1 nonsynonymous","G174T",1
"lib2","SARS-CoV-2","TTTTAACAGCACGAAG",9,119.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","D90H I104L S113H R124V S139A",5
"lib2","SARS-CoV-2","TTTTAACCTGGCCAGA",8,151.26,10.07,-0.77,0.04,2.83,1.03,0,"1 nonsynonymous","Q144F",1
"lib2","SARS-CoV-2","TTTTAACGAGCCGGGA",3,0.43,NA,NA,NA,NA,NA,NA,"stop","V77* A89L G155V",3
"lib2","SARS-CoV-2","TTTTAACGCCCTCATT",2,123.4,10.7,-0.14,0.02,2.9,1.11,0,">1 nonsynonymous","T63L K198E",2
"lib2","SARS-CoV-2","TTTTAACTGTGTTCTC",4,7.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L131H G146T",2
"lib2","SARS-CoV-2","TTTTAACTTCATAGAA",8,69.3,6,-4.84,2,1.5,1.2,0.01,">1 nonsynonymous","V103L F167S",2
"lib2","SARS-CoV-2","TTTTAAGAAAAACCAG",12,0.45,NA,NA,NA,NA,NA,NA,"stop","I28V A33I T55* G86R L188P",5
"lib2","SARS-CoV-2","TTTTAAGAAAAATTTA",1,22.1,10.76,-0.07,0.05,2.93,1.03,0,">1 nonsynonymous","R27L N64Y",2
"lib2","SARS-CoV-2","TTTTAAGAAAATTTTA",2,0,NA,NA,NA,NA,NA,NA,"stop","G9* A14R P54Q P82N",4
"lib2","SARS-CoV-2","TTTTAAGAAGTAGGTT",1,0,NA,NA,NA,NA,NA,NA,"stop","A22V C61S D68E K114V P169* Y175G L183I",7
"lib2","SARS-CoV-2","TTTTAAGAATTAGCGT",11,172.04,10.48,-0.35,0.05,2.83,1.09,0,">1 nonsynonymous","V32I S41H L111Y",3
"lib2","SARS-CoV-2","TTTTAAGCCAGGACTA",4,1.04,NA,NA,NA,NA,NA,NA,"stop","R27* S45* S139H N157H",4
"lib2","SARS-CoV-2","TTTTAAGCTTCTGTAC",3,8.42,NA,NA,NA,NA,NA,NA,"stop","C6*",1
"lib2","SARS-CoV-2","TTTTAAGGCCTTAAGA",8,77.62,9.82,-1.01,0.08,2.12,1.03,0,">1 nonsynonymous","F44A R136I S200L",3
"lib2","SARS-CoV-2","TTTTAAGTAAGTTCGA",6,37.3,6,-4.84,2,1.5,1.2,0.04,">1 nonsynonymous","F8I D34P C61Q P177I",4
"lib2","SARS-CoV-2","TTTTAAGTAGTTGATA",13,1.89,NA,NA,NA,NA,NA,NA,"stop","V11K C61* A105I F156A",4
"lib2","SARS-CoV-2","TTTTAAGTTACAGAAG",12,252.51,10.31,-0.53,0.03,2.94,1.06,0,"1 nonsynonymous","K87S",1
"lib2","SARS-CoV-2","TTTTAAGTTGATTCGA",2,5.25,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F8Y D34A C61L N118Y L183P",5
"lib2","SARS-CoV-2","TTTTAATAAAAAATGA",1,0.22,NA,NA,NA,NA,NA,NA,"stop","D34S V77* L122P H189S",4
"lib2","SARS-CoV-2","TTTTAATAGAGAAAAA",3,20.51,7.67,-3.16,0.29,1.5,1.06,0.03,"1 nonsynonymous","L162S",1
"lib2","SARS-CoV-2","TTTTAATATATAAAAC",9,213.05,10.85,0.01,0.06,2.94,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTAATCAAGGCAGG",3,67.56,9.63,-1.21,0.05,2.87,1.11,0,">1 nonsynonymous","Q84S D90A T170H",3
"lib2","SARS-CoV-2","TTTTAATCCAATACCA",20,265.55,9.9,-0.93,0.04,2.09,1.03,0,">1 nonsynonymous","L5S W106E K128S L188K P197T",5
"lib2","SARS-CoV-2","TTTTAATCTACGAAAC",8,2.57,NA,NA,NA,NA,NA,NA,"stop","P7H Y93S N110L Y119*",4
"lib2","SARS-CoV-2","TTTTAATGACAGCTTT",8,66.27,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","I72P P82H",2
"lib2","SARS-CoV-2","TTTTAATGTAGAACCA",6,1.43,NA,NA,NA,NA,NA,NA,"stop","V71* K128T D137* P169S E186Y",5
"lib2","SARS-CoV-2","TTTTAATTGTTCGTGA",7,48.63,7.09,-3.75,0.19,2.16,1.15,0.01,">1 nonsynonymous","T15S K114M Y175E",3
"lib2","SARS-CoV-2","TTTTACAAAGAATGTC",7,83.96,10,-0.84,0.08,2.63,1.13,0,"1 nonsynonymous","V173P",1
"lib2","SARS-CoV-2","TTTTACAAATATTAAT",3,7.49,6.37,-4.46,1.64,3,1.09,0.03,">1 nonsynonymous","S45K Y91D D137S",3
"lib2","SARS-CoV-2","TTTTACAACAAACAAA",2,37.43,10.86,0.02,0.06,3,1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTACAACAAGGCAG",3,9.11,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","V11G C49S Q84K N92Y V153D",5
"lib2","SARS-CoV-2","TTTTACAACCCTAATT",4,38.11,6,-4.84,2,1.5,1.11,0.03,">1 nonsynonymous","V32H N58S K87E C102S",4
"lib2","SARS-CoV-2","TTTTACAATCTGCAGC",6,44.79,6,-4.84,2,3,1.32,0.01,">1 nonsynonymous","C49M Y91W T148A",3
"lib2","SARS-CoV-2","TTTTACACAAGAGACT",17,173.8,9.78,-1.06,0.07,2.2,1.05,0,">1 nonsynonymous","N4S V11D",2
"lib2","SARS-CoV-2","TTTTACAGCCATAAAG",2,7.1,NA,NA,NA,NA,NA,0.29,">1 nonsynonymous","I2V D59K P96H V103N",4
"lib2","SARS-CoV-2","TTTTACAGTTGATTTA",12,142.02,10.83,-0.01,0.06,2.9,1.11,0,"1 nonsynonymous","V32R",1
"lib2","SARS-CoV-2","TTTTACATAACACAGT",3,40.68,8.03,-2.81,0.21,1.74,1.19,0.02,">1 nonsynonymous","F44N I104K P149R",3
"lib2","SARS-CoV-2","TTTTACATAACTACTG",1,76.03,10.86,0.02,0.06,2.9,1.13,0,"1 nonsynonymous","S43Y",1
"lib2","SARS-CoV-2","TTTTACATGAGCGCGG",1,3.3,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6S A33V S43Y G51Y F62N R78H T100H S129W D137N S184A",10
"lib2","SARS-CoV-2","TTTTACATGTGCAGTA",15,170.56,8.87,-1.97,0.11,1.69,1.11,0,">1 nonsynonymous","L60G Y91C S164M",3
"lib2","SARS-CoV-2","TTTTACATTACTGAAA",12,166.72,10.81,-0.03,0.05,2.92,1.09,0,"1 nonsynonymous","S43A",1
"lib2","SARS-CoV-2","TTTTACCACATTTTAC",1,9.81,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","D68T Y119V",2
"lib2","SARS-CoV-2","TTTTACCACTAATATT",3,25.28,9.98,-0.86,0.1,2.32,1.08,0,">1 nonsynonymous","N110W E186F",2
"lib2","SARS-CoV-2","TTTTACCCATTTAGAA",2,37.7,6,-4.84,2,1.5,1.3,0.05,">1 nonsynonymous","I2N V37T N109Y Y121D",4
"lib2","SARS-CoV-2","TTTTACCGGCGAAATT",3,83.25,10.75,-0.09,0.04,2.95,1.08,0,"1 nonsynonymous","T201N",1
"lib2","SARS-CoV-2","TTTTACCTAATCTCAA",6,128.56,8.79,-2.04,0.05,2.16,1.08,0,">1 nonsynonymous","F44I N58Y R73M",3
"lib2","SARS-CoV-2","TTTTACCTACAACCTG",1,0.91,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","Y50F F167W",2
"lib2","SARS-CoV-2","TTTTACCTATAATATT",20,275.01,11.08,0.24,0.05,2.93,1.08,0,"1 nonsynonymous","L122K",1
"lib2","SARS-CoV-2","TTTTACCTTTTAAGTA",2,15.32,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","F8P V37I G86E D97C L122T K128N",6
"lib2","SARS-CoV-2","TTTTACGAGTGAGACC",11,1092.18,6,-4.84,1.82,1.5,1.17,0.01,"1 nonsynonymous","I88H",1
"lib2","SARS-CoV-2","TTTTACGATAATGGCA",7,176.72,8.52,-2.32,0.12,2.53,1.07,0,">1 nonsynonymous","L60P Y119L",2
"lib2","SARS-CoV-2","TTTTACGGCACCTATC",1,11.09,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P82F A145T P197I",3
"lib2","SARS-CoV-2","TTTTACGGGTTCCATA",20,73.45,6.4,-4.43,0.62,1.5,1.25,0.02,">1 nonsynonymous","T15Y L38G T63C P133H",4
"lib2","SARS-CoV-2","TTTTACGTACTTAAGA",6,34.88,NA,NA,NA,NA,NA,NA,"stop","G117* P149I K199S",3
"lib2","SARS-CoV-2","TTTTACTAAAGCACTT",3,114.3,9.79,-1.05,0.07,2.28,1,0,">1 nonsynonymous","Y21V D98I",2
"lib2","SARS-CoV-2","TTTTACTACATTCTAT",1,0.02,NA,NA,NA,NA,NA,NA,"stop","G9K P197*",2
"lib2","SARS-CoV-2","TTTTACTATAAAATTT",8,21.52,6,-4.84,2,1.5,1.13,0.02,">1 nonsynonymous","I88N W106R F160L A190S",4
"lib2","SARS-CoV-2","TTTTACTCTATCACCG",4,32.06,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","L60S P82W A89S D98E",4
"lib2","SARS-CoV-2","TTTTACTTAAACCATA",2,20.27,9.83,-1.01,0.28,1.5,1.09,0.04,">1 nonsynonymous","F12H T100L",2
"lib2","SARS-CoV-2","TTTTAGAATCATAGGG",5,25.82,6,-4.84,2,1.5,1.24,0.04,">1 nonsynonymous","D59H Y93W R136M",3
"lib2","SARS-CoV-2","TTTTAGACGGACTGAT",4,1.13,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","F12V N24S G86A",3
"lib2","SARS-CoV-2","TTTTAGACTGTACAAA",3,55.63,9.06,-1.78,0.16,1.55,1.14,0.01,"1 nonsynonymous","F185N",1
"lib2","SARS-CoV-2","TTTTAGAGCAGTTCGA",7,63.11,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","Y39M G83Y Q144L C158H G166I",5
"lib2","SARS-CoV-2","TTTTAGAGCTAAGTAC",7,54.44,6,-4.84,2,3,1.17,0,">1 nonsynonymous","D90P N157Y",2
"lib2","SARS-CoV-2","TTTTAGATCCACTGGG",1,52.65,10.27,-0.57,0.04,3,1.04,0,"1 nonsynonymous","Q163E",1
"lib2","SARS-CoV-2","TTTTAGATGGTTATAC",3,30.24,10.77,-0.07,0.05,2.98,1.06,0,"1 nonsynonymous","S139G",1
"lib2","SARS-CoV-2","TTTTAGATTGCCTACA",7,0,NA,NA,NA,NA,NA,NA,"stop","S36L G83D A89* P149I",4
"lib2","SARS-CoV-2","TTTTAGCAATTCATTC",4,81.42,9.4,-1.44,0.07,2.99,1,0,">1 nonsynonymous","F44I G166V",2
"lib2","SARS-CoV-2","TTTTAGGAACAGAATT",17,153.59,6,-4.84,2,1.5,1.23,0.02,">1 nonsynonymous","I2E F62V Y119M C150Y",4
"lib2","SARS-CoV-2","TTTTAGGAATATAGTG",2,0,NA,NA,NA,NA,NA,NA,"stop","L95K T201*",2
"lib2","SARS-CoV-2","TTTTAGGCAACGGTCC",9,75.65,9.95,-0.88,0.05,2.79,1.08,0,">1 nonsynonymous","D90C Y123S",2
"lib2","SARS-CoV-2","TTTTAGGGACTTAACG",9,86.88,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","F70P N110P P149T",3
"lib2","SARS-CoV-2","TTTTAGTAAGTAAGCT",12,185.09,10.66,-0.18,0.05,2.94,1.06,0,">1 nonsynonymous","K26T I142T",2
"lib2","SARS-CoV-2","TTTTAGTAAGTTACTC",3,11.78,6.24,-4.6,0.57,1.5,1.08,0.01,">1 nonsynonymous","A14C A42T N120I S139Y",4
"lib2","SARS-CoV-2","TTTTAGTAGAGATAAC",3,28.59,10.14,-0.7,0.16,2.51,1.15,0.01,"1 nonsynonymous","Y91S",1
"lib2","SARS-CoV-2","TTTTAGTGAGATACAC",6,63.65,6,-4.84,2,1.5,1.23,0.03,">1 nonsynonymous","S53P L95E G152C",3
"lib2","SARS-CoV-2","TTTTAGTTAAAGCGTA",1,0,NA,NA,NA,NA,NA,NA,"stop","R16* V103L R136L L183N",4
"lib2","SARS-CoV-2","TTTTAGTTCAGAAAGA",4,81.97,10.81,-0.03,0.06,2.9,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTATAAAAAAAGAG",4,33.72,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","N4Y Q79R K87C C158F C195A",5
"lib2","SARS-CoV-2","TTTTATAAACTACTAA",9,87.59,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","C6F Y50T Y123C",3
"lib2","SARS-CoV-2","TTTTATAAAGTTCGGC",4,43.24,6,-4.84,2,1.5,1.19,0.02,">1 nonsynonymous","C6V V20L C61V D112K I138A T170E",6
"lib2","SARS-CoV-2","TTTTATAAATACCTAA",5,67.05,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","Y119T R127V",2
"lib2","SARS-CoV-2","TTTTATAAATCGATCC",2,42.37,6,-4.84,2,3,1.21,0,">1 nonsynonymous","E10K G51T G74V E76Y R136T",5
"lib2","SARS-CoV-2","TTTTATAAATTCTACT",2,64.26,8.87,-1.97,0.06,2.65,1,0,">1 nonsynonymous","K48L P54N R73S",3
"lib2","SARS-CoV-2","TTTTATAACCAACATC",8,90.89,10.52,-0.32,0.06,2.83,1.12,0,">1 nonsynonymous","V37S F134T",2
"lib2","SARS-CoV-2","TTTTATAACTAATAGC",5,84.37,10.41,-0.42,0.05,2.89,1.11,0,">1 nonsynonymous","L122R G155E S200F",3
"lib2","SARS-CoV-2","TTTTATAAGATTACAG",12,305.32,10.61,-0.23,0.02,2.93,1.06,0,"1 nonsynonymous","N4L",1
"lib2","SARS-CoV-2","TTTTATAAGCAATGGA",4,52.59,10.8,-0.04,0.04,3,1.01,0,">1 nonsynonymous","N64S V115A",2
"lib2","SARS-CoV-2","TTTTATAATCAACACT",7,13.41,9.2,-1.64,0.2,2.01,1.03,0.02,">1 nonsynonymous","A89H T100S",2
"lib2","SARS-CoV-2","TTTTATACAACGTGAC",6,1.47,NA,NA,NA,NA,NA,NA,"stop","V11S L38* F62L G83I G117R F156G",6
"lib2","SARS-CoV-2","TTTTATACCCAGGAAC",1,36.11,8.19,-2.64,0.31,1.5,1.13,0.03,">1 nonsynonymous","L57M T148L Q176L",3
"lib2","SARS-CoV-2","TTTTATACTACAATTC",4,51.09,10.27,-0.56,0.03,2.9,1.03,0,">1 nonsynonymous","E10D A33P N64I K132H",4
"lib2","SARS-CoV-2","TTTTATACTCGCTAAA",9,55.85,6,-4.84,2,1.5,1.2,0.02,">1 nonsynonymous","K26M G101P N107R",3
"lib2","SARS-CoV-2","TTTTATAGGATTCAAG",5,96.45,9.94,-0.9,0.06,2.79,1.1,0,">1 nonsynonymous","Y39V N107C K114M",3
"lib2","SARS-CoV-2","TTTTATAGGTTGATAT",1,32.34,NA,NA,NA,NA,NA,0.19,">1 nonsynonymous","F12L S19V G83S",3
"lib2","SARS-CoV-2","TTTTATAGTACACTTA",6,148.89,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","Q176F L183W",2
"lib2","SARS-CoV-2","TTTTATAGTCGGTGTT",1,10.68,6.38,-4.46,0.42,1.5,1.06,0.01,">1 nonsynonymous","F62P C102T E141S",3
"lib2","SARS-CoV-2","TTTTATATAATTTACC",1,4.23,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","I2L P96N",2
"lib2","SARS-CoV-2","TTTTATATATACTAAA",1,36.22,10.81,-0.02,0.06,2.94,1.08,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTTATATATATTTAA",5,0.39,NA,NA,NA,NA,NA,NA,"stop","R16L N118T E154R F167* K199M",5
"lib2","SARS-CoV-2","TTTTATATATCACTAT",12,35.98,6,-4.84,2,1.5,1.25,0.04,">1 nonsynonymous","K87Y D112K Q144Y",3
"lib2","SARS-CoV-2","TTTTATATTATACGTG",2,34.89,6.56,-4.27,0.21,1.5,1.09,0,">1 nonsynonymous","S113H N118C",2
"lib2","SARS-CoV-2","TTTTATCAATGTAATG",2,95.81,9.75,-1.09,0.03,2.94,1.07,0,"1 nonsynonymous","T170G",1
"lib2","SARS-CoV-2","TTTTATCCCACACTTG",6,79.06,10.38,-0.46,0.05,2.97,1.07,0,"1 nonsynonymous","C31P",1
"lib2","SARS-CoV-2","TTTTATGAGACTGTAC",7,47.56,10.88,0.05,0.05,2.9,1.09,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTTATGATTGATTAG",1,13.51,6,-4.84,2,1.5,1.22,0.05,">1 nonsynonymous","S41W S113W N157I G174L",4
"lib2","SARS-CoV-2","TTTTATGCAATCACAC",3,0.49,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89L Y119Q",2
"lib2","SARS-CoV-2","TTTTATGGCGAATACT",7,36.82,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","C61M V71R V77A D90I T100P G172R",6
"lib2","SARS-CoV-2","TTTTATGGGACACAAT",4,52.71,6.88,-3.96,0.14,1.5,1.1,0,">1 nonsynonymous","F8Q A14D Y119G C195F",4
"lib2","SARS-CoV-2","TTTTATGGTGACGCCG",1,13.5,10.89,0.05,0.24,2.63,1.11,0.02,"wildtype","",0
"lib2","SARS-CoV-2","TTTTATGTATTAATAT",2,15.75,6,-4.84,2,1.5,1.16,0.02,">1 nonsynonymous","A18R N58L A105V T140F P197M",5
"lib2","SARS-CoV-2","TTTTATTATACAGAAT",13,138.47,9.75,-1.09,0.09,1.99,1.05,0,">1 nonsynonymous","L122A P133M P149S",3
"lib2","SARS-CoV-2","TTTTATTCATCTAATC",6,26.92,9.28,-1.55,0.39,1.68,1.09,0.04,">1 nonsynonymous","F17Y K48D A105G",3
"lib2","SARS-CoV-2","TTTTATTGCAGTTCTA",1,33.93,10.74,-0.1,0.06,2.91,1.03,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTATTGCGCACTCC",4,0.1,NA,NA,NA,NA,NA,NA,"stop","T148C C158T V181*",3
"lib2","SARS-CoV-2","TTTTATTGGAATTAAA",7,71.78,6.02,-4.82,0.78,1.5,1.13,0.01,">1 nonsynonymous","Y91S V103R V153R T170R Q176A",5
"lib2","SARS-CoV-2","TTTTATTGTAGAAGAT",12,179.55,6.34,-4.5,0.25,1.5,1.09,0,">1 nonsynonymous","K56L C150M K198T",3
"lib2","SARS-CoV-2","TTTTATTTATAGCATT",2,7.64,10.06,-0.77,0.08,3,1,0.01,">1 nonsynonymous","T46N F156L",2
"lib2","SARS-CoV-2","TTTTATTTCACATATA",1,17.66,10.6,-0.24,0.17,2.36,1.07,0.01,">1 nonsynonymous","K48T L60I N110W Q163Y",4
"lib2","SARS-CoV-2","TTTTCAAAAATACAAA",13,62.25,8.74,-2.1,0.26,1.5,1.05,0.03,">1 nonsynonymous","T3S T15G N58F Y66R",4
"lib2","SARS-CoV-2","TTTTCAAACAAAGACG",4,67.32,9.81,-1.03,0.07,2.84,1.03,0,">1 nonsynonymous","V32C T85R Q144L",3
"lib2","SARS-CoV-2","TTTTCAAATATTGACA",1,2.17,NA,NA,NA,NA,NA,NA,"stop","L95A N107* N151P",3
"lib2","SARS-CoV-2","TTTTCAACATCAACAG",1,0.11,NA,NA,NA,NA,NA,NA,"stop","S43G L122W V153S E154*",4
"lib2","SARS-CoV-2","TTTTCAACGAACATAC",7,141.03,6.01,-4.83,0.54,1.5,1.14,0,">1 nonsynonymous","L95A F99S R124T N157C Q168F Y175D",6
"lib2","SARS-CoV-2","TTTTCAACGAATTAAA",5,75.8,6,-4.84,2,1.5,1.19,0.01,">1 nonsynonymous","R25V T85K T100N W106C",4
"lib2","SARS-CoV-2","TTTTCAACTCCACCCG",16,167.44,10.87,0.03,0.04,2.94,1.07,0,"1 nonsynonymous","T100Y",1
"lib2","SARS-CoV-2","TTTTCAAGACTGAATA",10,116,9.39,-1.44,0.07,2.87,1.06,0,"1 nonsynonymous","N109S",1
"lib2","SARS-CoV-2","TTTTCAATAAGTGTCC",3,29.58,9.88,-0.95,0.13,2.34,1.1,0.01,">1 nonsynonymous","G9A D34V Q84R",3
"lib2","SARS-CoV-2","TTTTCAATACAGTCGT",6,0.92,NA,NA,NA,NA,NA,NA,"stop","G51V K132* Y178N",3
"lib2","SARS-CoV-2","TTTTCAATGCGTGCTA",2,98.05,10.88,0.05,0.07,2.89,1.12,0,">1 nonsynonymous","T100F L122Q A192S",3
"lib2","SARS-CoV-2","TTTTCAATGTCTCCTT",2,30.5,8.71,-2.13,0.21,1.5,1,0.02,">1 nonsynonymous","F12S L60R P149K",3
"lib2","SARS-CoV-2","TTTTCACAACACTTAT",16,274.51,9.94,-0.9,0.05,2.66,1.04,0,">1 nonsynonymous","G9R Q84H V115T S129A",4
"lib2","SARS-CoV-2","TTTTCACAACGTTGGT",3,98.29,10.77,-0.06,0.04,2.99,1.03,0,"1 nonsynonymous","A14S",1
"lib2","SARS-CoV-2","TTTTCACATATACTTT",7,101.73,10.86,0.03,0.04,2.98,1.04,0,"synonymous","",0
"lib2","SARS-CoV-2","TTTTCACATCTTTGAA",5,73.27,6.49,-4.35,0.39,1.5,1.13,0.02,">1 nonsynonymous","F12K N58S Y178S",3
"lib2","SARS-CoV-2","TTTTCACCAATTTTTG",4,5.02,NA,NA,NA,NA,NA,0.47,">1 nonsynonymous","A33Y Y50V D98W R136H F167S G174V",6
"lib2","SARS-CoV-2","TTTTCACCACTGGATG",1,7.83,10.61,-0.23,0.07,3,1.01,0,"1 nonsynonymous","Y66C",1
"lib2","SARS-CoV-2","TTTTCAGACACGACTG",5,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","F99D",1
"lib2","SARS-CoV-2","TTTTCAGGGATCAAGC",2,6.13,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","Y39C N64I N120V Y143L T170W V182Y",6
"lib2","SARS-CoV-2","TTTTCAGTGAGATACT",20,222.48,10.82,-0.02,0.06,2.91,1.11,0,"1 nonsynonymous","I2G",1
"lib2","SARS-CoV-2","TTTTCATAGCAATATC",13,43.31,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","C61G K94S V180C",3
"lib2","SARS-CoV-2","TTTTCATATACATTTG",13,33.74,6,-4.84,1.82,3,1.32,0.03,">1 nonsynonymous","D90L T100N W106L",3
"lib2","SARS-CoV-2","TTTTCATATTCAGCCA",2,0,NA,NA,NA,NA,NA,NA,"stop","I2N G86* R127G",3
"lib2","SARS-CoV-2","TTTTCATATTTACTAG",4,6.05,NA,NA,NA,NA,NA,NA,"stop","P7W N30* F44P Y50F Q84P",5
"lib2","SARS-CoV-2","TTTTCATCCGATTCAT",1,49.07,6,-4.84,2,1.5,1.15,0.02,">1 nonsynonymous","K56L N64V Y121P Q176L",4
"lib2","SARS-CoV-2","TTTTCATGAAGAGAAC",2,1.14,NA,NA,NA,NA,NA,NA,"stop","C49T Y66* G83R S139T",4
"lib2","SARS-CoV-2","TTTTCATGACGCGCAT",1,0.27,NA,NA,NA,NA,NA,NA,"stop","Y35T C150L Q176*",3
"lib2","SARS-CoV-2","TTTTCATTAAGAAACA",1,5.14,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3L K48D T55C C61L F70H",5
"lib2","SARS-CoV-2","TTTTCATTGCCCGACT",5,155.48,10.63,-0.2,0.04,2.94,1.07,0,">1 nonsynonymous","K87H P149L",2
"lib2","SARS-CoV-2","TTTTCCAAATTCAAAC",16,161.74,9.91,-0.92,0.04,2.92,1.02,0,">1 nonsynonymous","S139N F156T",2
"lib2","SARS-CoV-2","TTTTCCAATACTGTAT",7,106.07,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","G51S P96R F99P",3
"lib2","SARS-CoV-2","TTTTCCACACGCCAAG",3,53.11,9.89,-0.95,0.09,2.3,1.09,0,">1 nonsynonymous","Q84T P96H",2
"lib2","SARS-CoV-2","TTTTCCACATGTAAAA",4,24.91,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","F44N P82S G174V",3
"lib2","SARS-CoV-2","TTTTCCACATTACCCA",4,104.81,10.64,-0.2,0.04,2.89,1.13,0,"1 nonsynonymous","N120L",1
"lib2","SARS-CoV-2","TTTTCCACTATCGAAA",2,5.81,10.38,-0.46,0.09,3,1.06,0,">1 nonsynonymous","T46I S129M S200K",3
"lib2","SARS-CoV-2","TTTTCCAGATAAAACA",3,52.75,10.24,-0.6,0.06,2.71,1.14,0,">1 nonsynonymous","D59V N64R",2
"lib2","SARS-CoV-2","TTTTCCATTGATCATC",1,0.59,NA,NA,NA,NA,NA,NA,"stop","T100L Y143* N157H",3
"lib2","SARS-CoV-2","TTTTCCCAAATATGTT",1,9.18,6.46,-4.37,0.48,1.94,1.04,0.02,">1 nonsynonymous","N64V L95K D112N L122T F156A",5
"lib2","SARS-CoV-2","TTTTCCCAATGTAGCA",3,35.3,10.78,-0.05,0.05,3,1.01,0,">1 nonsynonymous","V37Y E141H V153I",3
"lib2","SARS-CoV-2","TTTTCCCAGTTCAATG",4,0.42,NA,NA,NA,NA,NA,NA,"stop","N118T S129*",2
"lib2","SARS-CoV-2","TTTTCCCATATTTCAA",2,13.01,8.81,-2.02,0.17,2.48,1,0.01,">1 nonsynonymous","S41E A81T G166Q",3
"lib2","SARS-CoV-2","TTTTCCCCTATTCTTT",3,8.48,10.82,-0.02,0.07,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTCCCGCCAACATT",2,39.46,10.63,-0.21,0.05,2.93,1.07,0,">1 nonsynonymous","L5N T46C",2
"lib2","SARS-CoV-2","TTTTCCCTCGTTGAAC",4,61.72,10.84,0.01,0.05,2.93,1.05,0,"1 nonsynonymous","D97I",1
"lib2","SARS-CoV-2","TTTTCCCTTCCATGTC",8,0.54,NA,NA,NA,NA,NA,NA,"stop","A14L N30L Q84* D98R",4
"lib2","SARS-CoV-2","TTTTCCGCGATACATG",4,58.72,10.81,-0.02,0.08,2.9,1.11,0,"1 nonsynonymous","T100Q",1
"lib2","SARS-CoV-2","TTTTCCGGGGCAGGTA",8,32.18,8.94,-1.89,0.12,1.84,1.09,0.01,">1 nonsynonymous","S19D V77C",2
"lib2","SARS-CoV-2","TTTTCCTAAAGGAGAC",9,77.12,6,-4.84,2,1.5,1.1,0.01,">1 nonsynonymous","N4V E10P F70G Y143S T148V",5
"lib2","SARS-CoV-2","TTTTCCTTAAGAAGGG",1,0,NA,NA,NA,NA,NA,NA,"stop","G117D K132V G172*",3
"lib2","SARS-CoV-2","TTTTCCTTATAACTCC",4,0,NA,NA,NA,NA,NA,NA,"1 nonsynonymous","A105M",1
"lib2","SARS-CoV-2","TTTTCGAAAGTGAAAA",4,33.73,10.9,0.07,0.06,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTCGAAGAGCCGTA",15,81.73,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","D34N K56T F134S F167K",4
"lib2","SARS-CoV-2","TTTTCGAAGATACAAG",3,26.28,8.17,-2.67,0.15,2.29,1.05,0.01,">1 nonsynonymous","G146M G174T S200N",3
"lib2","SARS-CoV-2","TTTTCGACTTAGCCGG",1,29.86,10.77,-0.07,0.05,2.91,1.11,0,"1 nonsynonymous","L60V",1
"lib2","SARS-CoV-2","TTTTCGAGAATCACGT",3,3.15,NA,NA,NA,NA,NA,NA,"stop","R73E K114R N118* C150A",4
"lib2","SARS-CoV-2","TTTTCGATTTAATCGG",4,50.91,6.97,-3.87,0.34,1.5,1.13,0.03,">1 nonsynonymous","Q84W Y121H T140L V173C",4
"lib2","SARS-CoV-2","TTTTCGCATATTTATT",7,61.75,6,-4.84,2,3,1.16,0,"1 nonsynonymous","D68L",1
"lib2","SARS-CoV-2","TTTTCGGAACCAGGTT",1,29.76,10.03,-0.81,0.14,2.18,1.2,0.01,">1 nonsynonymous","P133L V173K",2
"lib2","SARS-CoV-2","TTTTCGGACAACAGAT",2,48.56,10.87,0.03,0.05,2.93,1.1,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTCGGCTTCACGTA",8,104.57,6,-4.84,2,3,1.18,0,">1 nonsynonymous","K56L D90V N109L G117L Q176V A192C",6
"lib2","SARS-CoV-2","TTTTCGGTATCGATAC",14,192.16,10.28,-0.55,0.05,2.76,1.1,0,">1 nonsynonymous","K94A V173F T201S",3
"lib2","SARS-CoV-2","TTTTCGTATTCAAAAA",7,46.2,10.56,-0.28,0.04,2.95,1.02,0,"1 nonsynonymous","I138W",1
"lib2","SARS-CoV-2","TTTTCGTGCACCGAGG",4,4.69,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C61L G101H A105P I138L",4
"lib2","SARS-CoV-2","TTTTCTAACACCATAC",6,13.38,7.96,-2.88,0.37,1.5,1.18,0.07,">1 nonsynonymous","A14V K94C I142M T148L",4
"lib2","SARS-CoV-2","TTTTCTAATAAAGCCG",3,26.55,10.98,0.14,0.13,2.82,1.17,0.01,"1 nonsynonymous","T201I",1
"lib2","SARS-CoV-2","TTTTCTAGGACAGTAG",1,43.08,9.66,-1.18,0.12,2.03,1.08,0.01,">1 nonsynonymous","A22K S45L D97N S164N",4
"lib2","SARS-CoV-2","TTTTCTATAGAAAATA",7,61.72,6,-4.84,2,1.5,1.16,0.01,">1 nonsynonymous","P54M N64L A81N G146D S164D",5
"lib2","SARS-CoV-2","TTTTCTATCAACTGCT",2,68.67,11.25,0.42,0.05,2.89,1.11,0,">1 nonsynonymous","N171Y K198Q",2
"lib2","SARS-CoV-2","TTTTCTATGACGCATG",7,170.08,10.91,0.08,0.04,2.94,1.05,0,"1 nonsynonymous","T140R",1
"lib2","SARS-CoV-2","TTTTCTATTAAACACC",5,71.04,10.27,-0.57,0.04,2.83,1.07,0,">1 nonsynonymous","L57W P149S P191R",3
"lib2","SARS-CoV-2","TTTTCTCGTAGAACAA",3,2.36,NA,NA,NA,NA,NA,NA,"stop","C6G K56* N92F",3
"lib2","SARS-CoV-2","TTTTCTGAATTAAATC",4,50.42,10.42,-0.41,0.04,2.94,1.07,0,"1 nonsynonymous","G146H",1
"lib2","SARS-CoV-2","TTTTCTGACACAACCG",1,2.12,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","P7K K48F C61H G86N S129T E135S",6
"lib2","SARS-CoV-2","TTTTCTGACTCTCAAT",7,105.4,10.1,-0.73,0.06,2.7,1.02,0,">1 nonsynonymous","A81R E141F",2
"lib2","SARS-CoV-2","TTTTCTGCAAACTTAC",1,74.88,10.33,-0.5,0.05,2.86,1.09,0,">1 nonsynonymous","S41L A89V L122R",3
"lib2","SARS-CoV-2","TTTTCTGCCCCTAATT",10,5.73,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","E10T C49L D90E T100P",4
"lib2","SARS-CoV-2","TTTTCTGTAATTGTAA",2,48.02,10.36,-0.47,0.05,2.9,1.1,0,">1 nonsynonymous","Y39S L60M T100A",3
"lib2","SARS-CoV-2","TTTTCTTAACGCGGTG",7,1.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T15W V115L N120L",3
"lib2","SARS-CoV-2","TTTTCTTCCTATACTA",1,19.04,9.59,-1.24,0.21,2.3,1.07,0.01,">1 nonsynonymous","A22Q S36M N107A V115L P197K",5
"lib2","SARS-CoV-2","TTTTCTTTAAGAACAA",2,14.7,9.46,-1.38,0.17,2.22,1.01,0.01,">1 nonsynonymous","A42G P96M",2
"lib2","SARS-CoV-2","TTTTCTTTACAGCAGC",3,15.58,NA,NA,NA,NA,NA,0.16,">1 nonsynonymous","P82Q G101V N118Y T140S",4
"lib2","SARS-CoV-2","TTTTGAAACGGAGCTA",2,35.03,10.65,-0.19,0.1,2.95,1.11,0,">1 nonsynonymous","E141V T201Y",2
"lib2","SARS-CoV-2","TTTTGAACCACGCTGA",6,0.02,NA,NA,NA,NA,NA,NA,"stop","K114*",1
"lib2","SARS-CoV-2","TTTTGACATTATGATT",1,0.39,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","E10S D137L T170V",3
"lib2","SARS-CoV-2","TTTTGACCAGTAATAG",9,86.34,6,-4.84,2,1.5,1.13,0.01,">1 nonsynonymous","P96T L162T Y175T",3
"lib2","SARS-CoV-2","TTTTGACCGTAGTTTG",4,17.06,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","Y21W S43L V52L C61P G86N Q163M",6
"lib2","SARS-CoV-2","TTTTGACGAAGCGAGA",5,117.66,10.85,0.01,0.05,2.9,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGACGGCTACAAC",11,332.16,10.73,-0.11,0.03,2.93,1.06,0,">1 nonsynonymous","V32L T55Y",2
"lib2","SARS-CoV-2","TTTTGACTTCAGCATG",1,12.82,10.22,-0.61,0.13,2.78,1.13,0.01,">1 nonsynonymous","N1M D59L",2
"lib2","SARS-CoV-2","TTTTGAGAATAGCGGG",1,2.2,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T63G F134L",2
"lib2","SARS-CoV-2","TTTTGAGCATGCCAAA",2,61.66,10.93,0.1,0.06,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGAGCCAAACAAC",4,113.19,10.08,-0.75,0.07,2.2,1.03,0,">1 nonsynonymous","W106S K128E",2
"lib2","SARS-CoV-2","TTTTGAGTCAAAAAAC",4,53.02,8.91,-1.92,0.07,1.92,1.07,0,">1 nonsynonymous","F8L F12L D34G G146H",4
"lib2","SARS-CoV-2","TTTTGATAAACTCATG",7,103.79,10.82,-0.01,0.05,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGATAATGCTAAT",1,3.51,NA,NA,NA,NA,NA,NA,"stop","I80V Y91V A105*",3
"lib2","SARS-CoV-2","TTTTGATACAATGAGC",5,23.46,9.6,-1.24,0.1,2.6,1.03,0,"1 nonsynonymous","Y121T",1
"lib2","SARS-CoV-2","TTTTGATGCGCATTTC",21,290.24,6,-4.84,1.67,1.5,1.15,0.01,">1 nonsynonymous","N107L Q168L",2
"lib2","SARS-CoV-2","TTTTGATTATTACATA",2,0,NA,NA,NA,NA,NA,NA,"stop","S41C R73* W106C G152C",4
"lib2","SARS-CoV-2","TTTTGATTATTATGCC",21,153.66,8.73,-2.11,0.23,1.5,1,0.02,">1 nonsynonymous","N4R E10S N40I K56C S184Y",5
"lib2","SARS-CoV-2","TTTTGATTTGATAAGG",2,85.98,10.17,-0.66,0.06,2.76,1.04,0,">1 nonsynonymous","Y165F V173D",2
"lib2","SARS-CoV-2","TTTTGATTTGCCATTA",10,53.38,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","R16N F99G N151F N157H",4
"lib2","SARS-CoV-2","TTTTGCAGTAATTCAG",9,0.84,NA,NA,NA,NA,NA,NA,"stop","A14T P133* N171K",3
"lib2","SARS-CoV-2","TTTTGCCAAGAACTAG",2,22.16,6.37,-4.46,0.74,1.5,1.14,0.04,">1 nonsynonymous","N4H E10S Q84S F99S R179G",5
"lib2","SARS-CoV-2","TTTTGCCATCTAACCT",3,0.43,NA,NA,NA,NA,NA,NA,"stop","G51D K56*",2
"lib2","SARS-CoV-2","TTTTGCCCAAAATCCA",3,69.39,9.12,-1.71,0.08,2.86,1.07,0,">1 nonsynonymous","K56L S113A Y119K V173F",4
"lib2","SARS-CoV-2","TTTTGCCGATACATTT",2,21.11,10.63,-0.21,0.07,2.9,1.04,0,"1 nonsynonymous","A18Y",1
"lib2","SARS-CoV-2","TTTTGCCGCGTGAGAT",4,3.34,NA,NA,NA,NA,NA,NA,"stop","I2* C6K D98H H189L",4
"lib2","SARS-CoV-2","TTTTGCCTAAACGTTA",11,27.19,NA,NA,NA,NA,NA,0.18,">1 nonsynonymous","N13I S19L",2
"lib2","SARS-CoV-2","TTTTGCCTACCTAATA",3,30.38,6,-4.84,2,1.5,1.14,0.02,">1 nonsynonymous","S29G Y93N F99T",3
"lib2","SARS-CoV-2","TTTTGCGAAAGTATAT",7,0.87,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGCGAAATGAAAA",3,67.98,6,-4.84,1.8,1.5,1.16,0.02,"1 nonsynonymous","P161F",1
"lib2","SARS-CoV-2","TTTTGCGATACCTATC",1,15.34,10.11,-0.72,0.13,2.57,1,0.01,">1 nonsynonymous","V77R Q84G",2
"lib2","SARS-CoV-2","TTTTGCGCACCTCTTT",16,259.63,10.71,-0.12,0.03,2.94,1.07,0,">1 nonsynonymous","K26R K128W",2
"lib2","SARS-CoV-2","TTTTGCGTTTGAAAGT",7,62.26,10.12,-0.72,0.06,2.81,1.09,0,">1 nonsynonymous","N107S K199Q",2
"lib2","SARS-CoV-2","TTTTGGAATACTATAG",1,21.06,6,-4.84,2,1.5,1.18,0.06,">1 nonsynonymous","G51K D59T D97L A105L P133S E154N",6
"lib2","SARS-CoV-2","TTTTGGACAAGTTAGT",4,114.87,10.83,-0.01,0.03,2.96,1.05,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGGACGATCAGAG",24,192.46,10.63,-0.21,0.03,2.92,1.09,0,"1 nonsynonymous","D59L",1
"lib2","SARS-CoV-2","TTTTGGCAACTAATTC",3,0.26,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V20T F44I D68E L183N",4
"lib2","SARS-CoV-2","TTTTGGCACGAATCAT",6,0.42,NA,NA,NA,NA,NA,NA,"stop","A14S D34* P169*",3
"lib2","SARS-CoV-2","TTTTGGCATATAAATT",5,40.64,10.74,-0.1,0.06,2.84,1.16,0,"1 nonsynonymous","T55F",1
"lib2","SARS-CoV-2","TTTTGGCGGTTAGAAA",15,0.24,NA,NA,NA,NA,NA,NA,"stop","N4* T46N V103K Y119V",4
"lib2","SARS-CoV-2","TTTTGGCGTAACACGT",4,29.11,6,-4.84,2,1.5,1.29,0.03,">1 nonsynonymous","L5K I28S L60F E135C",4
"lib2","SARS-CoV-2","TTTTGGCTAACTTGAG",3,17.86,6.38,-4.46,0.4,1.5,1.16,0.03,">1 nonsynonymous","D34N G86A P96N Y119S",4
"lib2","SARS-CoV-2","TTTTGGGACAGATATC",1,6.44,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S53A L60R",2
"lib2","SARS-CoV-2","TTTTGGGCAGTACAAT",9,65.24,6,-4.84,2,1.5,1.26,0.02,">1 nonsynonymous","V37M Y93H W106V Y123F",4
"lib2","SARS-CoV-2","TTTTGGGCGAGGTAAG",1,0,NA,NA,NA,NA,NA,NA,"stop","C61S D90E L122*",3
"lib2","SARS-CoV-2","TTTTGGTGTGAAATCA",1,13.89,10.82,-0.02,0.06,3,1.04,0,"1 nonsynonymous","N130D",1
"lib2","SARS-CoV-2","TTTTGTAAGCTGGTAA",7,211.64,10.81,-0.02,0.03,2.92,1.09,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGTAAGGTCAAGC",1,6.91,10.66,-0.18,0.13,2.95,1.08,0.01,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGTAAGTAAGAGC",6,86.38,10.85,0.02,0.05,2.89,1.12,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGTAATAACTACG",3,33.54,7.96,-2.87,0.17,2.04,1.11,0.01,">1 nonsynonymous","Y39V S45T Y143S P149A",4
"lib2","SARS-CoV-2","TTTTGTAATTGAATCC",6,42.74,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","S36L A105K D137P",3
"lib2","SARS-CoV-2","TTTTGTACAAGTACAA",1,35.3,10.78,-0.06,0.07,2.95,1.06,0,">1 nonsynonymous","A33L L60E",2
"lib2","SARS-CoV-2","TTTTGTACTAAAAATC",7,161.02,10.63,-0.2,0.03,2.96,1.03,0,"1 nonsynonymous","T100A",1
"lib2","SARS-CoV-2","TTTTGTGCAACGAAAA",8,85.18,10.88,0.05,0.05,2.93,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGTGCACAAGTCT",2,16.17,6,-4.84,2,1.5,1.1,0.03,">1 nonsynonymous","C6S N107L A192L",3
"lib2","SARS-CoV-2","TTTTGTGTATAGAAAG",3,8.87,11.11,0.28,0.09,3,1.02,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTGTGTATAGCACC",3,3.87,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","C6H K128N N157L L187A",4
"lib2","SARS-CoV-2","TTTTGTTAGATTGTGA",3,37.5,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","L57Q N109H Y119S",3
"lib2","SARS-CoV-2","TTTTTAAAAATGAGCA",1,33.37,8.84,-2,0.08,1.89,1.08,0,"1 nonsynonymous","V77E",1
"lib2","SARS-CoV-2","TTTTTAAACATGAGGC",5,18.37,6,-4.84,2,1.5,1.16,0.03,">1 nonsynonymous","Y35P D112A V173R",3
"lib2","SARS-CoV-2","TTTTTAAAGTAGAGAA",1,0.51,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S41C F47N Y143A",3
"lib2","SARS-CoV-2","TTTTTAAATAAACAAC",8,24.92,NA,NA,NA,NA,NA,0.1,">1 nonsynonymous","N1S G9M A18I N40G S200R",5
"lib2","SARS-CoV-2","TTTTTAACAAACGCAC",8,14.28,6.15,-4.69,1.45,1.5,1.28,0.04,">1 nonsynonymous","F44Y K128R S147F L183S",4
"lib2","SARS-CoV-2","TTTTTAACACTATACG",2,54.36,10.81,-0.02,0.05,2.98,1.05,0,"1 nonsynonymous","T63Q",1
"lib2","SARS-CoV-2","TTTTTAACCGGCAAAT",3,78.15,8.61,-2.23,0.09,3,1.06,0,">1 nonsynonymous","L125R G146A",2
"lib2","SARS-CoV-2","TTTTTAAGAATATATG",1,4.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A89H S164R",2
"lib2","SARS-CoV-2","TTTTTAAGACCCTTAA",7,72.22,6.12,-4.72,0.94,1.5,1.25,0.02,">1 nonsynonymous","T63Y D97P D137Y",3
"lib2","SARS-CoV-2","TTTTTAAGAGCAATAA",8,113.73,7.17,-3.66,0.17,1.5,1.14,0.01,">1 nonsynonymous","R27H L38K N107R T140R",4
"lib2","SARS-CoV-2","TTTTTAATAAATTGGT",1,16.48,9.77,-1.06,0.17,2.5,1.15,0.01,"1 nonsynonymous","P133I",1
"lib2","SARS-CoV-2","TTTTTAATAGAATGAA",1,0,NA,NA,NA,NA,NA,NA,"stop","T63* T85I L95S V115M Q144R",5
"lib2","SARS-CoV-2","TTTTTAATCTATCTCT",2,117.11,8.45,-2.38,0.1,2.88,1.06,0,">1 nonsynonymous","N4R A145W",2
"lib2","SARS-CoV-2","TTTTTAATCTTATCTA",3,18.55,6.67,-4.16,0.54,1.5,1.13,0.04,">1 nonsynonymous","P7L T15V F44L L125C P149F",5
"lib2","SARS-CoV-2","TTTTTACAATTGAAAT",1,3.67,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Y N13D S36T C49L T85Y K132Y E186A",7
"lib2","SARS-CoV-2","TTTTTACATAATCGTA",6,71.2,10.32,-0.51,0.06,2.83,1.14,0,">1 nonsynonymous","T15K L60T R78H",3
"lib2","SARS-CoV-2","TTTTTACATAGTATAA",7,42.9,9.11,-1.73,0.11,1.85,1.08,0.01,">1 nonsynonymous","K94G E141V",2
"lib2","SARS-CoV-2","TTTTTACCAACCTCTA",9,161.38,9.92,-0.92,0.08,2.37,1.04,0,">1 nonsynonymous","G9A S45L K128Y",3
"lib2","SARS-CoV-2","TTTTTACCAGAATAAA",10,155.3,9.09,-1.75,0.03,2.92,1.06,0,">1 nonsynonymous","K132H T170L",2
"lib2","SARS-CoV-2","TTTTTACGAAGGATAC",13,198.5,10.91,0.07,0.07,2.93,1.07,0,">1 nonsynonymous","T85K T148Q",2
"lib2","SARS-CoV-2","TTTTTACGGAACTAGA",7,9.81,6,-4.84,2,1.5,1.26,0.07,">1 nonsynonymous","I2E S41C Y91F D97S V173W V180A",6
"lib2","SARS-CoV-2","TTTTTACTATACGTTA",6,22.71,6,-4.84,2,1.5,1.2,0.03,">1 nonsynonymous","N1K C6L S113L",3
"lib2","SARS-CoV-2","TTTTTACTCGACTTGA",9,182.43,10.17,-0.67,0.02,2.89,1.07,0,">1 nonsynonymous","S41A C61Y N151T",3
"lib2","SARS-CoV-2","TTTTTAGAAAGGATAG",7,135.55,10.11,-0.73,0.08,2.43,1.04,0,">1 nonsynonymous","T3L K26W V77L",3
"lib2","SARS-CoV-2","TTTTTAGAAGGTCCAA",8,83.66,6,-4.84,2,1.5,1.25,0.02,">1 nonsynonymous","F17Q Y66V L95A",3
"lib2","SARS-CoV-2","TTTTTAGACAAAAGTA",1,7.64,6,-4.84,2,1.5,1.15,0.05,">1 nonsynonymous","I88S R136L",2
"lib2","SARS-CoV-2","TTTTTAGATCTCGAAT",2,9.02,6,-4.84,2,1.5,1.07,0.01,">1 nonsynonymous","F8A C49R P149T",3
"lib2","SARS-CoV-2","TTTTTAGCGGATATTG",5,13.77,6,-4.84,2,3,1.15,0,">1 nonsynonymous","G9Q A89C F99S W106S Q144S",5
"lib2","SARS-CoV-2","TTTTTAGGATCACATT",7,144.56,10.87,0.03,0.05,2.93,1.07,0,"1 nonsynonymous","T63N",1
"lib2","SARS-CoV-2","TTTTTAGTAGTCTTAA",5,87.71,8.32,-2.52,0.14,2.91,1.08,0.01,"1 nonsynonymous","Y175M",1
"lib2","SARS-CoV-2","TTTTTAGTATAATCAC",5,62.61,7.33,-3.5,0.21,1.5,1.16,0.01,">1 nonsynonymous","L38V K56R K114V G146C",4
"lib2","SARS-CoV-2","TTTTTAGTGTTATGAC",11,168.62,10.72,-0.11,0.03,2.91,1.08,0,"1 nonsynonymous","D97G",1
"lib2","SARS-CoV-2","TTTTTATACGTAATAT",2,31.4,10.82,-0.02,0.04,3,1.01,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTATATACATATA",3,35.1,10.68,-0.16,0.06,2.9,1.11,0,">1 nonsynonymous","N120R K128A",2
"lib2","SARS-CoV-2","TTTTTATTCAGGATCC",1,57.71,10.8,-0.04,0.1,2.86,1.08,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTATTTACGTTTG",5,14.78,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","V65D D98Y I104G",3
"lib2","SARS-CoV-2","TTTTTCAAGATTAATT",1,38.71,6,-4.84,2,1.5,1.14,0.01,">1 nonsynonymous","G83Q D97L G116Q Y175T",4
"lib2","SARS-CoV-2","TTTTTCAATGCTATTT",2,26.06,9.64,-1.2,0.14,2.02,1.04,0.01,">1 nonsynonymous","D137A T201H",2
"lib2","SARS-CoV-2","TTTTTCACCTTGTAAC",4,30.53,10.85,0.02,0.05,2.9,1.13,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTCACTGGGTGTT",5,45.84,7.04,-3.8,0.23,1.5,1.07,0.01,">1 nonsynonymous","C150R L188Q",2
"lib2","SARS-CoV-2","TTTTTCAGAAGGCGCA",6,1.27,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","T3Q N13V N107Y",3
"lib2","SARS-CoV-2","TTTTTCATCACAAGAG",2,22.25,6,-4.84,2,1.5,1.16,0.04,">1 nonsynonymous","Y91W I104R N120L",3
"lib2","SARS-CoV-2","TTTTTCATGCTCCCTA",8,183.04,10.14,-0.7,0.05,2.71,1.08,0,">1 nonsynonymous","T3D L57K L187N",3
"lib2","SARS-CoV-2","TTTTTCCAAGAAGCAT",6,77.62,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","L5F V52S N58I R179W",4
"lib2","SARS-CoV-2","TTTTTCCAAGTAAACA",13,214.3,9.91,-0.93,0.06,2.67,1.09,0,">1 nonsynonymous","K56T Q144L",2
"lib2","SARS-CoV-2","TTTTTCCATGATCCTA",2,3.2,NA,NA,NA,NA,NA,NA,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTCCCCAAAACCT",2,18.31,6,-4.84,1.51,1.5,1.09,0.05,">1 nonsynonymous","R73K V182G",2
"lib2","SARS-CoV-2","TTTTTCCGCCTGTACG",9,138.68,10.08,-0.76,0.03,2.87,1.09,0,">1 nonsynonymous","A42S F156L",2
"lib2","SARS-CoV-2","TTTTTCCTGACATGAT",2,3.05,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","A33K N40S I88N V103K",4
"lib2","SARS-CoV-2","TTTTTCCTTTAACCGT",3,0.16,NA,NA,NA,NA,NA,NA,"stop","I2* T85P A105E D112N",4
"lib2","SARS-CoV-2","TTTTTCGATAAAAATA",4,82.58,9.55,-1.28,0.05,2.93,1.05,0,"1 nonsynonymous","N109Y",1
"lib2","SARS-CoV-2","TTTTTCGCCCCCGTAA",5,80.9,8.72,-2.12,0.08,2.95,1.05,0,">1 nonsynonymous","Y35L K128S Y143S",3
"lib2","SARS-CoV-2","TTTTTCGCTTAGCTCG",6,21,6.1,-4.74,0.71,1.5,1.11,0.01,">1 nonsynonymous","D68G A81S F156R V181P",4
"lib2","SARS-CoV-2","TTTTTCGGAAATGTTA",3,30.76,6,-4.84,2,1.5,1.29,0.07,">1 nonsynonymous","G9L F62W I72N",3
"lib2","SARS-CoV-2","TTTTTCGGCCATACCA",15,190.21,6,-4.84,2,1.5,1.13,0,">1 nonsynonymous","Y39V D90W C150L",3
"lib2","SARS-CoV-2","TTTTTCGTTAACCGCC",5,68.38,10.39,-0.45,0.04,2.96,1.03,0,">1 nonsynonymous","N58F N120K",2
"lib2","SARS-CoV-2","TTTTTCTATTTGGCTG",6,40.31,9.39,-1.44,0.13,2.88,1.16,0.01,"1 nonsynonymous","Y119T",1
"lib2","SARS-CoV-2","TTTTTCTGCGTAAACC",8,14.65,NA,NA,NA,NA,NA,0.14,">1 nonsynonymous","C49Y C158W V181Y",3
"lib2","SARS-CoV-2","TTTTTCTTAATAAATC",9,84.66,6.3,-4.54,0.65,1.5,1.27,0.02,">1 nonsynonymous","R27I G51S V103E",3
"lib2","SARS-CoV-2","TTTTTCTTAGATTCCA",1,2.5,NA,NA,NA,NA,NA,NA,"stop","I2F V52H Y93* G146F",4
"lib2","SARS-CoV-2","TTTTTCTTTGACGAGC",6,24.13,6,-4.84,2,3,1.23,0.01,">1 nonsynonymous","L38T P96S S139W",3
"lib2","SARS-CoV-2","TTTTTGAAAATAAGAT",10,178.69,10.47,-0.36,0.04,2.93,1.04,0,">1 nonsynonymous","G9Y Q84V D98Q",3
"lib2","SARS-CoV-2","TTTTTGAAAATTCTGA",14,126.22,6,-4.84,2,1.5,1.25,0.01,">1 nonsynonymous","V11E A18T Y93S D112G L187Q",5
"lib2","SARS-CoV-2","TTTTTGAAACGTAATT",12,221.69,10.51,-0.33,0.04,2.94,1.02,0,">1 nonsynonymous","N1M G116E S129G",3
"lib2","SARS-CoV-2","TTTTTGAATCACGTTA",14,94.16,6,-4.84,2,1.5,1.15,0.01,">1 nonsynonymous","F12R C31I D98C N130C",4
"lib2","SARS-CoV-2","TTTTTGACACGCACCG",1,3.62,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","V103C Y165W",2
"lib2","SARS-CoV-2","TTTTTGACGAGTAAGC",8,3.28,NA,NA,NA,NA,NA,NA,"stop","T15*",1
"lib2","SARS-CoV-2","TTTTTGATACTTTAGG",4,16.12,6,-4.84,2,1.5,1.09,0.01,">1 nonsynonymous","T85R D90P Y143R",3
"lib2","SARS-CoV-2","TTTTTGATTCCAGTCA",9,16.7,7.24,-3.6,0.47,1.5,1,0.07,">1 nonsynonymous","T15F A33G T63L A81F L122W F134A P149L",7
"lib2","SARS-CoV-2","TTTTTGCAACCATGGA",8,46.32,9.61,-1.22,0.11,2.06,1.05,0.01,">1 nonsynonymous","N13V D90K L122M",3
"lib2","SARS-CoV-2","TTTTTGCCTAGGAGAC",3,13.48,NA,NA,NA,NA,NA,0.08,">1 nonsynonymous","V103Y C150S C158D",3
"lib2","SARS-CoV-2","TTTTTGCTTCTTAAGT",1,1.32,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","S19R G51K T100N P149L G166R",5
"lib2","SARS-CoV-2","TTTTTGGTACAACGTA",6,76.44,8.59,-2.24,0.09,2.45,1.07,0,">1 nonsynonymous","Q84V T100N T140S E154K Q168L",5
"lib2","SARS-CoV-2","TTTTTGGTCTTTAACT",5,47.72,6,-4.84,2,1.5,1.11,0.01,">1 nonsynonymous","A81T P96S P177V",3
"lib2","SARS-CoV-2","TTTTTGTGAACCTCAG",2,10.72,6,-4.84,2,1.5,1.06,0.01,">1 nonsynonymous","I88Y F134I",2
"lib2","SARS-CoV-2","TTTTTGTGTTAAAGAC",6,46.67,6,-4.84,2,1.5,1.12,0.01,">1 nonsynonymous","A89L L162I G174Q",3
"lib2","SARS-CoV-2","TTTTTGTTAAAACCAT",18,200.89,10.74,-0.1,0.03,2.97,1.04,0,">1 nonsynonymous","K128L I138T",2
"lib2","SARS-CoV-2","TTTTTTAACGCGTCTA",4,30.43,6,-4.84,2,1.5,1.17,0.02,">1 nonsynonymous","V37R L57S G86N F99I",4
"lib2","SARS-CoV-2","TTTTTTAAGCACAATA",13,179.53,10.2,-0.63,0.04,2.84,1.06,0,">1 nonsynonymous","R73K A89C",2
"lib2","SARS-CoV-2","TTTTTTAATGAAGGTC",17,3.93,NA,NA,NA,NA,NA,NA,"stop","S41V T63I G86* W106V",4
"lib2","SARS-CoV-2","TTTTTTAATGACTTAG",8,88.3,10.63,-0.2,0.05,2.95,1.06,0,"1 nonsynonymous","G116V",1
"lib2","SARS-CoV-2","TTTTTTACATACTTAA",4,10.39,6,-4.83,0.86,3,1.05,0,">1 nonsynonymous","C102K S113T",2
"lib2","SARS-CoV-2","TTTTTTAGAAATATAT",1,40.56,NA,NA,NA,NA,NA,0.12,">1 nonsynonymous","N4V A18D Q176L",3
"lib2","SARS-CoV-2","TTTTTTAGACTATATG",2,124,10.32,-0.51,0.03,2.88,1.09,0,"1 nonsynonymous","A67T",1
"lib2","SARS-CoV-2","TTTTTTAGGCGCTAGG",3,44.79,10.77,-0.07,0.04,2.95,1.06,0,">1 nonsynonymous","T46M K56L",2
"lib2","SARS-CoV-2","TTTTTTAGGTTGTATC",13,174.55,6,-4.84,2,1.5,1.18,0.01,">1 nonsynonymous","R16C D34G G86A Y159Q",4
"lib2","SARS-CoV-2","TTTTTTATAAAATTCT",1,8.72,9.97,-0.86,0.14,2.91,1,0.01,">1 nonsynonymous","F12L G174T",2
"lib2","SARS-CoV-2","TTTTTTATATTGGAAT",13,79.08,6,-4.84,2,1.5,1.21,0.03,">1 nonsynonymous","A33S F47V Y93E Y165R",4
"lib2","SARS-CoV-2","TTTTTTATCCAAATCG",7,63.01,10.61,-0.22,0.07,2.89,1.11,0,"1 nonsynonymous","N30R",1
"lib2","SARS-CoV-2","TTTTTTCAAAAATATT",6,36.24,10.84,0,0.08,2.96,1.02,0,">1 nonsynonymous","K128E S139R",2
"lib2","SARS-CoV-2","TTTTTTCAAGAGTAAC",5,69.13,6,-4.84,2,1.5,1.11,0,">1 nonsynonymous","G117I R124L",2
"lib2","SARS-CoV-2","TTTTTTCACGAGAAGC",2,16.25,NA,NA,NA,NA,NA,0.11,">1 nonsynonymous","T15R N40D T100S L162C",4
"lib2","SARS-CoV-2","TTTTTTCACTGATGTA",5,159.69,9.01,-1.82,0.08,2.65,1.13,0,">1 nonsynonymous","E10R F160T T170K",3
"lib2","SARS-CoV-2","TTTTTTCATTGGTCAA",1,0,NA,NA,NA,NA,NA,NA,">1 nonsynonymous","N58K N107H Y123C P149I",4
"lib2","SARS-CoV-2","TTTTTTCCCAGTTGAC",1,8.68,6,-4.84,2,1.5,1.19,0.03,">1 nonsynonymous","T46P N58L G152P T201V",4
"lib2","SARS-CoV-2","TTTTTTCCGCCACTGG",1,32.74,8.99,-1.84,0.22,1.51,1.1,0.03,">1 nonsynonymous","N1L A22L N58I",3
"lib2","SARS-CoV-2","TTTTTTCGCAGGTTTA",10,60.47,8.52,-2.31,0.14,1.5,1.03,0.01,">1 nonsynonymous","F62S D137N",2
"lib2","SARS-CoV-2","TTTTTTCGTAGATGAG",1,20.81,7.95,-2.88,0.28,1.5,1,0.04,">1 nonsynonymous","G86Y K132R Y175F",3
"lib2","SARS-CoV-2","TTTTTTGAAATGCCAT",4,24.92,9.36,-1.48,0.12,2.72,1.04,0,">1 nonsynonymous","P133Q G166S",2
"lib2","SARS-CoV-2","TTTTTTGCATGGAGAC",5,23.02,NA,NA,NA,NA,NA,0.22,">1 nonsynonymous","A14P I80T Q84F G146S N151P G155V Y159S",7
"lib2","SARS-CoV-2","TTTTTTGCTGGCATAT",1,10.37,10.6,-0.23,0.1,2.98,1,0,"1 nonsynonymous","Y91M",1
"lib2","SARS-CoV-2","TTTTTTGGAAATGACA",5,62.74,10.82,-0.02,0.05,2.96,1.07,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTTGGACGCTATA",8,143.06,10.86,0.02,0.06,2.92,1.04,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTTTAAGTCCCAA",5,72.5,10.59,-0.25,0.08,2.95,1.05,0,">1 nonsynonymous","Y66L G174N",2
"lib2","SARS-CoV-2","TTTTTTTACAGTCTTG",12,115.19,8.18,-2.66,0.09,2,1.06,0,"1 nonsynonymous","Y165S",1
"lib2","SARS-CoV-2","TTTTTTTACCAGACTG",14,153.26,9.46,-1.37,0.08,1.93,1.06,0,">1 nonsynonymous","G83V D98L",2
"lib2","SARS-CoV-2","TTTTTTTCTTTAAAAA",7,45.66,6,-4.84,2,1.5,1.26,0.05,">1 nonsynonymous","V71H S147Q",2
"lib2","SARS-CoV-2","TTTTTTTGAAGCCCCA",8,83.17,10.94,0.1,0.07,2.85,1.11,0,"wildtype","",0
"lib2","SARS-CoV-2","TTTTTTTTAAAATATA",5,94.62,10.16,-0.67,0.05,2.7,1.04,0,">1 nonsynonymous","N1I Q84I N130L",3